BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780299|ref|YP_003064712.1| acyl-CoA dehydrogenase protein
[Candidatus Liberibacter asiaticus str. psy62]
         (562 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780299|ref|YP_003064712.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039976|gb|ACT56772.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 562

 Score = 1167 bits (3018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/562 (100%), Positives = 562/562 (100%)

Query: 1   MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60
           MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL
Sbjct: 1   MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW
Sbjct: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS
Sbjct: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS
Sbjct: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG
Sbjct: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA
Sbjct: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG
Sbjct: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG
Sbjct: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS
Sbjct: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540

Query: 541 THCMLHGRFNAAHIIDSLYLDC 562
           THCMLHGRFNAAHIIDSLYLDC
Sbjct: 541 THCMLHGRFNAAHIIDSLYLDC 562


>gi|315122276|ref|YP_004062765.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495678|gb|ADR52277.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 551

 Score =  906 bits (2341), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/550 (80%), Positives = 494/550 (89%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ HQ  DSL  LNQP LFIGMNAY SDS +V L ANFP  + KELELLGEYV S +AQ
Sbjct: 1   MNQTHQQLDSLSELNQPSLFIGMNAYKSDSFVVDLTANFPRSIRKELELLGEYVFSYSAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN+N PQLHAYG GGER D++EFHPAWHALLRRS+ DGLHC++W+R++EP VRKQ
Sbjct: 61  ELARMANHNIPQLHAYGAGGERCDRIEFHPAWHALLRRSMKDGLHCAVWNRNYEPEVRKQ 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HKIRAARLYLMAQLEAGHL S S+TSASMVALMTTPRVHKDWA KI S+EYDPT+KAPM
Sbjct: 121 IHKIRAARLYLMAQLEAGHLTSLSMTSASMVALMTTPRVHKDWAYKILSQEYDPTSKAPM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKTSV IGLGLTEK+GGTDI AITS GQKISDGIYCLSGHKWFLS+PMSDAFIMLA+VEG
Sbjct: 181 QKTSVTIGLGLTEKQGGTDIGAITSLGQKISDGIYCLSGHKWFLSAPMSDAFIMLARVEG 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            VGCFLVPRLLEDGS NGLCYQRLKNKIGNRSNATVE+EFSN FGFLLGDLN  T PVED
Sbjct: 241 IVGCFLVPRLLEDGSSNGLCYQRLKNKIGNRSNATVEVEFSNAFGFLLGDLNAGTSPVED 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           MKIL+YLD AI+S SGMR SLAEAIHYARRR+VSG ILIDQ +M R IAD+ALD+AAATA
Sbjct: 301 MKILMYLDCAIISTSGMRASLAEAIHYARRRYVSGNILIDQSIMNRVIADVALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLAN+FDEAK RSE+AAYAR+MAP+TKYWCCK+APAVIAEAMECIGGSGY+EERSIA
Sbjct: 361 LSFRLANAFDEAKLRSEDAAYARVMAPVTKYWCCKIAPAVIAEAMECIGGSGYVEERSIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRESPANSILLGSGNAMVLD+LNLLEKG+NLFEQ+FS LE+DLGSSGKKVI +L+DS+
Sbjct: 421 RHYRESPANSILLGSGNAMVLDLLNLLEKGSNLFEQVFSNLEKDLGSSGKKVIDLLQDSV 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLCKED+GLAR L E++A+A+SAAAL R G ++IADVFLE+RF  N HST+ +LH R N+
Sbjct: 481 SLCKEDRGLARLLIERMAIAASAAALCREGADNIADVFLESRFFGNGHSTYGLLHSRVNS 540

Query: 552 AHIIDSLYLD 561
            HIIDSLYLD
Sbjct: 541 THIIDSLYLD 550


>gi|222085618|ref|YP_002544148.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221723066|gb|ACM26222.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 552

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/548 (59%), Positives = 409/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q  +  D+   LNQP L+ G+NAY SD L+V L +N P    ++LE +G YV S  AQ
Sbjct: 1   MTQSTRNDDTFAELNQPSLWSGINAYRSDPLIVDLTSNLPRSTREDLEQMGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH SIWD   +P  + Q
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSAGLHSSIWDAQADPDAKGQ 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RAAR YL AQLE GHL   ++TSAS+ A+M +P V KDWAPK+ SR+YD +NK  M
Sbjct: 121 SHKVRAARFYLTAQLECGHLCPLTMTSASVAAMMASPAVQKDWAPKVLSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  +   K+SDGIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRTTADKVSDGIYRLSGHKWFMSAPMSDAFIMLAQTKD 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDGGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASAGIMRASLAEAVHHTRGRSVFGKTLVQQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+FRLA SFD+A S SE+AAYAR+M P+ KYWCCK+APA+I EAMECIGGSGYIEER IA
Sbjct: 361 LAFRLAESFDKASSSSEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGSGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR ++
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGRDLFETVFAGLARDLGPAGKKTIDVLRAAM 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLIEQMALAAGAAELYRLGAGKIADAFIETRLAGGWRSTYGMLDARFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|218509657|ref|ZP_03507535.1| acyl-CoA dehydrogenase protein [Rhizobium etli Brasil 5]
          Length = 552

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/548 (58%), Positives = 411/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|190891326|ref|YP_001977868.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190696605|gb|ACE90690.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 552

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/548 (58%), Positives = 411/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  V ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGVREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFTDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGRMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|241204127|ref|YP_002975223.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858017|gb|ACS55684.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 552

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/548 (58%), Positives = 413/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  EMARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL +QLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|209548903|ref|YP_002280820.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534659|gb|ACI54594.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 552

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/548 (58%), Positives = 412/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  + L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|116251506|ref|YP_767344.1| acyl CoA-like DNA repair protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115256154|emb|CAK07235.1| putative acyl CoA-like DNA repair protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 552

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/548 (58%), Positives = 412/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  EMARMANQGAPQLRTHGPRGERLDIVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL +QLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|327190278|gb|EGE57378.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 552

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/548 (58%), Positives = 410/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|86357277|ref|YP_469169.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86281379|gb|ABC90442.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 552

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/548 (58%), Positives = 410/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENIGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADIEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|150396160|ref|YP_001326627.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027675|gb|ABR59792.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 550

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/548 (56%), Positives = 406/548 (74%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKSLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+ ++P V K+WAPKI SR+YD TN+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITSSPAVQKEWAPKILSRKYDSTNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLSRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|15888635|ref|NP_354316.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15156363|gb|AAK87101.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 550

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/548 (56%), Positives = 397/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q  +  ++L  LNQP L+ G+NAY SD L+V L +     +  E + LG YV S  AQ
Sbjct: 1   MTQNSRTEETLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEYDQLGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQLH +GP GER D+VEFHPAWHAL+RRS+  GLH S+W+ S  P  R  
Sbjct: 61  ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENS--PDTRGS 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK RA + YL +QLEAGHL   ++TSAS+ A+MT+PRV K+W PKI SR+YD   K  +
Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSPRVQKEWMPKILSRKYDSAQKPAL 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKT+V +G+G+TEK+GGTD+ A  +  +++ +GIY LSGHKWFLS+PMSD F+MLAQ+  
Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRTTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLGD       + D
Sbjct: 239 GMGCFLVPRYLEDGSKNGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGDPGSGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+AR R V G +L+ QP+M R +AD+ALD+AAATA
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHFARGRSVFGKMLVSQPIMTRVLADMALDVAAATA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A++   EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA
Sbjct: 359 LSFRLATAFDAARNNPAEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK   +LR +I
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +L + D+G AR L E+ ALA++AA L R G   IAD FLE R       T+ ML  RF+ 
Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538

Query: 552 AHIIDSLY 559
            +IID LY
Sbjct: 539 NYIIDLLY 546


>gi|15965058|ref|NP_385411.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021]
 gi|307301130|ref|ZP_07580899.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15074237|emb|CAC45884.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306904085|gb|EFN34671.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 550

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD +N+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|307317863|ref|ZP_07597301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306896625|gb|EFN27373.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 550

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD +N+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N++  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAVWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|325292671|ref|YP_004278535.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325060524|gb|ADY64215.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 550

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/548 (56%), Positives = 399/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M  +++  +SL  LNQP L+ G+NAY SD L+V L +     +  E + LG YV S  AQ
Sbjct: 1   MTGMNRTEESLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEFDQLGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQLH +GP GER D+VEFHPAWHAL+RRS+  GLH S+W+ + E   R  
Sbjct: 61  ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENAAE--TRGN 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK RA + YL +QLEAGHL   ++TSAS+ A+MT+ RV K+W PKI SR+YD + K  +
Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSSRVQKEWVPKILSRKYDSSQKPAL 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKT+V +G+G+TEK+GGTD+ A  S  +++ +GIY LSGHKWFLS+PMSD F+MLAQ+  
Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRSTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLG+       + D
Sbjct: 239 GMGCFLVPRYLEDGSANGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGEPGSGVRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+AR R V G  L+ QP+M R +AD+ALD+AAATA
Sbjct: 299 MVTLTRLDCALASSGMMRASLAEAVHFARGRSVFGKTLVSQPIMTRVLADMALDVAAATA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD A++ + EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA
Sbjct: 359 LSFRLASAFDAARNNASEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK   +LR +I
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +L + D+G AR L E+ ALA++AA L R G   IAD FLE R       T+ ML  RF+ 
Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538

Query: 552 AHIIDSLY 559
            +IID LY
Sbjct: 539 NYIIDLLY 546


>gi|222148314|ref|YP_002549271.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221735302|gb|ACM36265.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 547

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/540 (56%), Positives = 394/540 (72%), Gaps = 2/540 (0%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D L  LNQP  + G+NA+ +D L+V +       +  E + LG YV S  AQELARMAN+
Sbjct: 6   DKLLELNQPRPWSGVNAFRTDPLVVDITNGLSRNLRDEYDTLGRYVTSHEAQELARMANH 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S+W+   +   R Q HK RA R
Sbjct: 66  NPPELRTHGPRGERLDVVEFHPAWHALMRRSMATGLHSSVWENLAD--ARGQDHKARAVR 123

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL AQLE GHL   ++TSAS+ ALM +PRV K+WAPKI SR+YD +N+  MQK+++ IG
Sbjct: 124 FYLTAQLECGHLCPLTMTSASVAALMGSPRVQKEWAPKILSRKYDSSNRPAMQKSAITIG 183

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GGTD+ A  S   ++ +GIY LSGHKWF+S+PMSD F+MLAQ+   VGCFLVP
Sbjct: 184 MGMTEKQGGTDVRANISTATRVGEGIYRLSGHKWFMSAPMSDGFVMLAQMPEGVGCFLVP 243

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           RLLEDGS NGL +QRLK+KIGNRSNA+ E+EF++ FGFLLG+       + +M  L  LD
Sbjct: 244 RLLEDGSANGLQFQRLKDKIGNRSNASSEVEFTDAFGFLLGEQGGGIRTILEMVTLTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S   MR S+AEA+H+ R R V G  L+DQP+M R +AD+ALD+AAATALSFRLA +
Sbjct: 304 CALASAGIMRASMAEAVHHVRGRSVFGKKLVDQPIMTRVLADMALDVAAATALSFRLAEA 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD A+    +AAYAR+M P+ KYW CKMAP +I EAMECIGGSGY+EER+IARHYRE+P 
Sbjct: 364 FDRARDNPADAAYARVMTPVVKYWVCKMAPPLIYEAMECIGGSGYVEERAIARHYREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           N+I  GSGN M LDVL +L +G +LFE +F+ LE+DLG SG+K + +LR +++LC+ D+G
Sbjct: 424 NAIWEGSGNVMALDVLRVLARGKDLFEMVFAELERDLGPSGRKTVEVLRAAMALCERDEG 483

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            AR L E++ALA++AA LYR G   IAD FLE R      +T+ +L  RF++ ++ID LY
Sbjct: 484 AARLLVEQMALAAAAAELYRMGAGKIADAFLETRLTGGWRNTYGVLDARFDSRYLIDLLY 543


>gi|227821660|ref|YP_002825630.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227340659|gb|ACP24877.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 550

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 306/548 (55%), Positives = 399/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NAY SD L+V + +  P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGINAYRSDPLMVDITSAMPKPLRDEFDALGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD TN+  M
Sbjct: 119 SHKARAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSTNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLNGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R+V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRNVFGKSLVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A   +++AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHGSADDAAYARIMTPVAKYWCCKIAPALIYEAMECLGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF    +DLG +G K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFGVFSRDLGPAGPKTIDVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      +T+ ML  RF++
Sbjct: 479 SLCERDEGAARLLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRATYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|13470871|ref|NP_102440.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14021614|dbj|BAB48226.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 548

 Score =  558 bits (1439), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/548 (49%), Positives = 382/548 (69%), Gaps = 4/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q    +D +   NQPP   G NA+  D LL+ L   F   V K+L+ LG +VL+  AQ
Sbjct: 1   MRQGQSVTDDV--TNQPPPLTGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQ 58

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELAR+AN  TP+L  +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+ 
Sbjct: 59  ELARLANVETPKLRTHDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR- 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            H++RAAR YL A+LE GHL   ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P+
Sbjct: 118 -HQVRAARFYLTAELETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPV 176

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           +KT + +G+G+TEK+GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ   
Sbjct: 177 EKTGLTLGMGMTEKQGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPE 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CFLVPR+L DGS NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + D
Sbjct: 237 GLSCFLVPRVLGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMIGEPGAGVKTIMD 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATA
Sbjct: 297 MVTLTRLDCAVASSAIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATA 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA SFDEA S   EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +A
Sbjct: 357 LSFRLARSFDEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLA 416

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           R+YRE+P N+I  GSGN M LDVL +L +   LFE++ + +++DLG+ G+  I +L+ ++
Sbjct: 417 RYYREAPVNAIWEGSGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAM 476

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
            +   D+G AR LTE++AL+++AA L R G   IAD F+E R      +T+ M+  R +A
Sbjct: 477 QVALTDEGSARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDA 536

Query: 552 AHIIDSLY 559
             IID+LY
Sbjct: 537 RMIIDTLY 544


>gi|260459182|ref|ZP_05807437.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034736|gb|EEW35992.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 542

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/534 (50%), Positives = 376/534 (70%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP   G NA+  D LL+ L   F   V K+L+ LG +VL+  AQELAR+AN  TP+L 
Sbjct: 7   NQPPPLAGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQELARLANVETPKLR 66

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+  H++RAAR YL A+
Sbjct: 67  THDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR--HQVRAARFYLTAE 124

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LE GHL   ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P+ KT + +G+G+TEK
Sbjct: 125 LETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPVDKTGLTLGMGMTEK 184

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ    + CFLVPR+L DG
Sbjct: 185 QGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPRVLGDG 244

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + DM  L  LD A+ S 
Sbjct: 245 SGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDCAVASS 304

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATALSFRLA SFDEA S
Sbjct: 305 AIMRAGLAEAVHHARHRQVFGSPLIEQPLMQRVLADMALDVAAATALSFRLARSFDEAAS 364

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +AR+YRE+P N+I  G
Sbjct: 365 DRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVNAIWEG 424

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDVL +L +   LFE++ + +++DLG+ G+  I +L+ ++ +   D+G AR LT
Sbjct: 425 SGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGSARLLT 484

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++AL+++AA L R G   IAD F+E R      +T+ ML  R +A  IID+LY
Sbjct: 485 EQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMLDARHDARMIIDTLY 538


>gi|319783702|ref|YP_004143178.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317169590|gb|ADV13128.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 542

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 267/534 (50%), Positives = 376/534 (70%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP   G NA+  D LL+ L   F   V +EL+ LG +VL+  AQELAR+AN  TP+L 
Sbjct: 7   NQPPPLTGGNAWRGDPLLIQLAERFSDPVRRELDGLGRFVLTQEAQELARLANVETPKLR 66

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+  H++RAAR YL A+
Sbjct: 67  THDRQGRRIDVVEFHPAYHALMRRSVANGLHSSVWENGDTEIGRR--HQVRAARFYLTAE 124

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LE GHL   ++T+AS+ ALM +P++ ++WAP++ +R+YD + K P++KT + +G+G+TEK
Sbjct: 125 LETGHLCPITMTNASLAALMASPKLFREWAPRVTTRKYDQSQKPPVEKTGLTLGMGMTEK 184

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ    + CFLVPR+L DG
Sbjct: 185 QGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPRVLGDG 244

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + DM  L  LD AI S 
Sbjct: 245 SGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDCAIASS 304

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATALSFRLA SFDEA S
Sbjct: 305 AIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATALSFRLARSFDEAAS 364

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +AR+YRE+P N+I  G
Sbjct: 365 DRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVNAIWEG 424

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDVL +L +   LFE + + +++DLG+ G+  I +L+ ++ +   D+G AR LT
Sbjct: 425 SGNVMALDVLRVLGRAPGLFEDVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGSARLLT 484

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++AL+++AA L R G   IAD F+E R      +T+ M+  R +A  IID+LY
Sbjct: 485 EQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDARMIIDTLY 538


>gi|254720415|ref|ZP_05182226.1| acyl-CoA dehydrogenase family protein [Brucella sp. 83/13]
          Length = 551

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/550 (48%), Positives = 367/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|294853604|ref|ZP_06794276.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819259|gb|EFG36259.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 551

 Score =  538 bits (1387), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/550 (48%), Positives = 367/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN  +P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTESPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGIGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|23500342|ref|NP_699782.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161620660|ref|YP_001594546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|225629091|ref|ZP_03787124.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo]
 gi|254699834|ref|ZP_05161662.1| acyl-CoA dehydrogenase family protein [Brucella suis bv. 5 str.
           513]
 gi|254705906|ref|ZP_05167734.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254711133|ref|ZP_05172944.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           B2/94]
 gi|254712408|ref|ZP_05174219.1| acyl-CoA dehydrogenase family protein [Brucella ceti M644/93/1]
 gi|254715480|ref|ZP_05177291.1| acyl-CoA dehydrogenase family protein [Brucella ceti M13/05/1]
 gi|256015375|ref|YP_003105384.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029514|ref|ZP_05443128.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M292/94/1]
 gi|260167395|ref|ZP_05754206.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|23463957|gb|AAN33787.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161337471|gb|ABX63775.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|225615587|gb|EEH12636.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo]
 gi|255998035|gb|ACU49722.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
          Length = 551

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|265985434|ref|ZP_06098169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839008|ref|ZP_07471829.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
 gi|306845932|ref|ZP_07478499.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|264664026|gb|EEZ34287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306273567|gb|EFM55412.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306405914|gb|EFM62172.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
          Length = 542

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/534 (49%), Positives = 360/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|306841754|ref|ZP_07474440.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306288159|gb|EFM59546.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 542

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/534 (49%), Positives = 360/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQTGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWIGGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|17989016|ref|NP_541649.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|62317545|ref|YP_223398.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269526|ref|YP_418817.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|225686384|ref|YP_002734356.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|237817093|ref|ZP_04596085.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254691042|ref|ZP_05154296.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 6 str.
           870]
 gi|254695651|ref|ZP_05157479.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698826|ref|ZP_05160654.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732273|ref|ZP_05190851.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 4 str.
           292]
 gi|256043495|ref|ZP_05446422.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256111485|ref|ZP_05452499.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256256227|ref|ZP_05461763.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 9 str.
           C68]
 gi|297249584|ref|ZP_06933285.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|17984855|gb|AAL53913.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|62197738|gb|AAX76037.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939800|emb|CAJ12808.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain [Brucella melitensis
           biovar Abortus 2308]
 gi|225642489|gb|ACO02402.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|237787906|gb|EEP62122.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|297173453|gb|EFH32817.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 551

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|256157709|ref|ZP_05455627.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|256253319|ref|ZP_05458855.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
          Length = 551

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|148558419|ref|YP_001257585.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148369704|gb|ABQ62576.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 551

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD   S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMTASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|163844750|ref|YP_001622405.1| hypothetical protein BSUIS_B0595 [Brucella suis ATCC 23445]
 gi|163675473|gb|ABY39583.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 551

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+L R+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLVRLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|260568114|ref|ZP_05838583.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261217215|ref|ZP_05931496.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261313335|ref|ZP_05952532.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318724|ref|ZP_05957921.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320086|ref|ZP_05959283.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261750308|ref|ZP_05994017.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261756805|ref|ZP_06000514.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986522|ref|ZP_06099079.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|260154779|gb|EEW89860.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260922304|gb|EEX88872.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292776|gb|EEX96272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297947|gb|EEY01444.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261302361|gb|EEY05858.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736789|gb|EEY24785.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740061|gb|EEY27987.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|264658719|gb|EEZ28980.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 542

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|256059209|ref|ZP_05449415.1| acyl-CoA dehydrogenase family protein [Brucella neotomae 5K33]
          Length = 551

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  ++ ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|261220435|ref|ZP_05934716.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265996214|ref|ZP_06108771.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260919019|gb|EEX85672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262550511|gb|EEZ06672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 542

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/534 (49%), Positives = 358/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|189022800|ref|YP_001932541.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260544781|ref|ZP_05820602.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260564690|ref|ZP_05835175.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260756638|ref|ZP_05868986.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760068|ref|ZP_05872416.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763307|ref|ZP_05875639.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882455|ref|ZP_05894069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261216051|ref|ZP_05930332.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|265989913|ref|ZP_06102470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265992982|ref|ZP_06105539.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265999102|ref|ZP_05465007.2| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|189021374|gb|ACD74095.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260098052|gb|EEW81926.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260152333|gb|EEW87426.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260670386|gb|EEX57326.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673728|gb|EEX60549.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676746|gb|EEX63567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260871983|gb|EEX79052.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917658|gb|EEX84519.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|262763852|gb|EEZ09884.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000582|gb|EEZ13272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092211|gb|EEZ16508.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410756|gb|ADZ67820.1| Acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554048|gb|ADZ88687.1| Acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 542

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARHNAMRIIDQLY 539


>gi|261323158|ref|ZP_05962355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261299138|gb|EEY02635.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 542

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P   G NAY  D LL+ + A FP  ++ ELE  G +VLS  AQ+LAR+AN   P+L 
Sbjct: 8   NQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAEAQDLARLANTELPKLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+   + H+ RAAR YL AQ
Sbjct: 68  THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           LEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+G+TEK
Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PRL E G
Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD A+ S 
Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S
Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I  G
Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           SGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LT
Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           E++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|153010986|ref|YP_001372200.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562874|gb|ABS16371.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 530

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/527 (48%), Positives = 358/527 (67%), Gaps = 2/527 (0%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G NAY  D LL+ + A FP  +H +LE  G +V S  AQ+LAR+AN   P+L  +   G 
Sbjct: 3   GNNAYLGDPLLMQIAAGFPKELHADLEQTGRFVSSAEAQDLARLANTELPKLRTHDRQGN 62

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D VE+HPA+HAL+RRSI  GLHCSIW+ +  P+   + H+ RA+R +L AQLEAGHL 
Sbjct: 63  RIDLVEYHPAYHALMRRSIAAGLHCSIWEGN--PLESGRRHQARASRFFLTAQLEAGHLC 120

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++TSAS+ ALM +P ++K+W+P I SR YD + K    K  + +G+G+TEK+GGTD+ 
Sbjct: 121 PLTMTSASLAALMASPEIYKEWSPVILSRRYDFSQKPAFAKQGITLGMGMTEKQGGTDVR 180

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A T++  +  DG Y ++GHKWF+S+PMSDAF+ LAQ E  + CFL+PRL  +GS NG  +
Sbjct: 181 ANTTRATRNDDGTYAITGHKWFMSAPMSDAFLTLAQAEEGLSCFLLPRLTSEGSGNGFFF 240

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           QRLK+K+GN+SNA+ E+EF    G L+G+       + DM  L  LD AI S   MR  L
Sbjct: 241 QRLKDKLGNKSNASSEVEFDGAIGHLIGNPGEGVKTIMDMVTLTRLDCAIASAGLMRSGL 300

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           AEA+H++R R V G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S   EAA+
Sbjct: 301 AEAVHHSRYRQVFGKALVEQPLMQRVLADMALDVAGATALSMRLARAFDMAASDRAEAAF 360

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           AR M P+ KYW CK+APA++ EAMEC+GG+GYIEE ++AR YRE+P N+I  GSGN M L
Sbjct: 361 ARCMTPVVKYWVCKIAPALLYEAMECLGGNGYIEEGNLARAYREAPVNAIWEGSGNVMAL 420

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           DV  +L +   LF+++   +   LG  G+  + +LR ++ L + D G+AR LTE++A A+
Sbjct: 421 DVARVLSRAPGLFDEVLEWIGGQLGPRGQGTLDVLRAALQLTETDPGVARLLTEQLAYAA 480

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           +AA L + G +++AD F+E R      ST+ ML  R NA  I+D LY
Sbjct: 481 AAAELRQIGADNVADAFIETRLGGQWRSTYGMLDARHNAERILDQLY 527


>gi|110633713|ref|YP_673921.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110284697|gb|ABG62756.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 543

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/535 (49%), Positives = 365/535 (68%), Gaps = 2/535 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           LNQPP   G NA+  D LLV L   F   V K++E LG +V +  AQELAR+AN   P L
Sbjct: 7   LNQPPPISGTNAWRGDPLLVQLCERFSEPVRKDVEQLGRFVRTQEAQELARLANTELPVL 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VE+HPA+HAL+RRS   GLH SIW+   +   + Q H+ RAAR YL A
Sbjct: 67  KTHDRYGFRVDQVEYHPAYHALMRRSASAGLHSSIWEDGEDE--KGQRHQARAARFYLTA 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE GHL   ++TSA++ ALM+ P + + WAP++ +R+YD  N+   QK  V +G+G+TE
Sbjct: 125 QLECGHLCPMTMTSAALAALMSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ A T++ +   +G+Y L+GHKWF+S+PMSD F++LAQ E  + CFL+PR+ +D
Sbjct: 185 KQGGTDVRANTTRAEPAGEGLYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVTDD 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ NG  +QRLK+K+GNRSNA+ E+EF    G+L+G+       + DM  L  LD A+ S
Sbjct: 245 GATNGFRFQRLKDKLGNRSNASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCALAS 304

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR +LAEA+H+AR R V G  L +QP+M R +AD+ALD+AAATAL+FRLA SFDEA 
Sbjct: 305 SGLMRAALAEAVHHARHRSVFGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDEAA 364

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   EAAYAR+M P+TKYW CK+APAVI EAMEC+GG+GY+EE  +AR+YRE+P N+I  
Sbjct: 365 NGRAEAAYARVMTPVTKYWVCKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAIWE 424

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           GSGN M LDVL +L +   LF+ +   +  DLG +G   + +L  ++ +C+ D+G  R L
Sbjct: 425 GSGNVMALDVLRVLSRNAGLFDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGRIL 484

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           TE++ALA++AA L R G   +AD F+E R       T+ ML  R++A  I+D LY
Sbjct: 485 TEQLALAAAAAELKRLGAGQVADAFIETRLAGQWRGTYGMLDARYDAVAILDMLY 539


>gi|163759340|ref|ZP_02166426.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162283744|gb|EDQ34029.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 530

 Score =  511 bits (1317), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/529 (49%), Positives = 359/529 (67%), Gaps = 14/529 (2%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           +L  + A+ P  +  + E +G+Y  S  AQ+LAR+AN   P+L  +   G R D+V+FHP
Sbjct: 1   MLKDIAADMPRGLRADFETVGKYTSSAEAQDLARIANRAVPELRTHDASGNRIDQVDFHP 60

Query: 102 AWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           +WHAL+RRS+  GL  S+W+ R  E  V   AH+ RA R YL A LE GHL   ++T+AS
Sbjct: 61  SWHALMRRSVSIGLQGSVWEGRRDEKGV---AHQARAIRFYLTAGLECGHLCPLTMTNAS 117

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           + A+M  PR+ K WAP+I SR YD +++  MQKT V IG+G+TEK+GGTD+ A  S+  +
Sbjct: 118 IAAIMAAPRIEKSWAPQIVSRRYDSSHRPAMQKTGVTIGMGMTEKQGGTDVRANESRAVR 177

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----------VGCFLVPRLLEDGSPNGL 270
           + +G+Y L GHKWFLS+PMSDAF+MLA+  G           + CFLVPR+LEDG+ NGL
Sbjct: 178 VGEGVYRLEGHKWFLSAPMSDAFVMLARTGGAASGDTLSEEGLSCFLVPRILEDGTLNGL 237

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             QRLK K+GNRSNA+ E+EFS+T+GFLLG        + DM  L  LD A+ S   MR 
Sbjct: 238 RLQRLKEKLGNRSNASSEVEFSDTYGFLLGGEGEGIRTILDMVTLTRLDCALASAGMMRA 297

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           SLAEA+H+ R R V G +LIDQP+M R +AD+AL++A ATALS RLA +FD A+    EA
Sbjct: 298 SLAEAVHHCRHRRVFGELLIDQPLMARVLADLALEVAGATALSMRLARAFDNARDNPAEA 357

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A AR++ P+ KYW CK+AP+V+ E MEC+GG+GY+E+R+IARHYRE+P N+I  GSGN M
Sbjct: 358 AIARLLTPVVKYWVCKIAPSVLYEIMECMGGNGYVEDRAIARHYREAPVNAIWEGSGNVM 417

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
            LDVL +L +G  L +    ++  DLG++G + + +LR  +++ + D+G  R LTE++AL
Sbjct: 418 ALDVLRVLTRGRELCDVALDSINTDLGAAGPRTVDVLRACMAVAERDEGAGRLLTEQMAL 477

Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           A++AA L R G   +A+ F+E R      ST+ ML  RF+A  I+D LY
Sbjct: 478 AAAAAELTRLGAGHVAEAFVETRLGGAWRSTYGMLDARFDARQIVDLLY 526


>gi|90417722|ref|ZP_01225634.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337394|gb|EAS51045.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 559

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/537 (44%), Positives = 342/537 (63%), Gaps = 5/537 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ   + G NA+  D LL  L A+FP  V   LE  G +  S  A +LAR+AN  TP+L 
Sbjct: 21  NQSSDYAGFNAFRGDPLLRLLAADFPDPVLTTLERHGRFCGSFEAHDLARLANIETPRLR 80

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R + +++HPA+HAL+RRS+ DGLH SIW    E   R+  H +RA R Y+ A 
Sbjct: 81  RFDEKGRRLELIDYHPAYHALMRRSVADGLHASIWQGPEEEAGRR--HAVRATRFYMTAG 138

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GHL   ++TSAS+ AL   P++   W P I +R+YDP+ KAP+ K  + +G+G+TEK
Sbjct: 139 VECGHLCPLTMTSASVAALAAAPKLRDTWLPVIATRQYDPSVKAPLTKAGITLGMGMTEK 198

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A T++      G Y L+GHKWF+S+PMSD F++LAQ +    CFL+PR  +DG
Sbjct: 199 QGGTDVRANTTRAVDAGGGHYRLTGHKWFMSAPMSDGFLVLAQTQEGPTCFLMPRRRDDG 258

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S NGL +QRLK+K+GNRSNA+ E+EF +     +GD       + +M  L  LD A+ S 
Sbjct: 259 SLNGLHFQRLKDKLGNRSNASSEVEFVDADARRVGDPGKGVKTIIEMVTLTRLDCALASA 318

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR +LAEA+H+AR R V G  LI+QP M R +AD+ALD+AAAT LSFRLA +FD    
Sbjct: 319 GLMRGALAEAVHHARERRVFGKTLIEQPQMVRVLADMALDVAAATVLSFRLAEAFDRRTG 378

Query: 386 R---SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +AA+AR+M P+TKYW CKMAP +  EAMEC+GG+GY+E+  +AR YRE+P N+I
Sbjct: 379 EAASEADAAWARVMTPVTKYWVCKMAPGLTYEAMECLGGNGYVEDGRLARAYREAPVNAI 438

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LD+  +L++    F+ + +T+E D+  +      +LR ++S+   D+G  R
Sbjct: 439 WEGSGNVMALDLARILQRDPQAFDTVIATIEADMAETAGGTPGVLRAAMSMALADEGACR 498

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            L E++ALA ++A++ R G+   AD F E R       T+ ML  R ++  I++ LY
Sbjct: 499 LLAEQLALAGASASMRRLGLGQTADAFTETRLGGVFRHTYGMLDLRHDSQAIVEDLY 555


>gi|254702973|ref|ZP_05164801.1| acyl-CoA dehydrogenase domain protein [Brucella suis bv. 3 str.
           686]
 gi|261753582|ref|ZP_05997291.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261743335|gb|EEY31261.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 441

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/443 (50%), Positives = 302/443 (68%), Gaps = 4/443 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +  P+  
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           +AR YRE+P N+I  GSGN M L
Sbjct: 419 LARAYREAPVNAIWEGSGNVMAL 441


>gi|254474156|ref|ZP_05087547.1| probable AidB protein [Pseudovibrio sp. JE062]
 gi|211956686|gb|EEA91895.1| probable AidB protein [Pseudovibrio sp. JE062]
          Length = 551

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/550 (41%), Positives = 345/550 (62%), Gaps = 4/550 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS--VVHKELELLGEYVLSCT 69
           M++V Q + +   +NQ P + G N   SD +L+A +    S     +EL   GE   +  
Sbjct: 1   MDKVSQATMTTGVINQAPPYCGYNLAESDPILLADLGGTGSNDSAREELIKFGEQCGAAD 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A +L R+AN N P L  + P G R D VEFHP++HAL+RRS   GLH +  + S EP   
Sbjct: 61  ALDLGRLANVNEPVLKTHDPYGRRLDVVEFHPSYHALMRRSFEAGLHSASVE-SMEPGGD 119

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  +  RA + ++M+Q+E GHL   ++T+AS +AL   P + K W  +I SR+YD   + 
Sbjct: 120 RAFYN-RARKYFVMSQVEGGHLCPVTMTNASAMALTQAPELAKVWNERILSRKYDQRFRP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             QK  V++G+G+TEK+GG+D+  I ++ +K+SD  Y ++GHKWF S+PM DAF++LA++
Sbjct: 179 ASQKMGVSLGMGMTEKQGGSDLRQIITRAEKVSDDTYVINGHKWFFSAPMCDAFLVLAKL 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E    CFLVPR+LE G  NGL +QRLKNK+GN+SNA+ E+EF+N  GFL+G+       +
Sbjct: 239 EEGPTCFLVPRILESGEVNGLDFQRLKNKLGNKSNASSEVEFNNAVGFLVGEAGKGIKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M     +D  I S + MR +++ A+H+   R   G  LI++P+M+R +AD++LD+AA+
Sbjct: 299 LKMVTPTRVDCCIGSAALMRAAISRAVHHTSNRSAFGARLIEKPLMQRVLADMSLDMAAS 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ +LA+  D+    S+ A + RI+ P  KYW CK A  V AEAMEC+GG+GY+E+  
Sbjct: 359 EALALKLAHCMDQEGEDSQAADFLRIITPAAKYWICKSAENVAAEAMECLGGNGYVEDHD 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P NSI  GSGN M LD+L  + +  + F  +   LE DLG +GK  + +L+ 
Sbjct: 419 MARIYREAPVNSIWEGSGNIMALDLLRAMHRTPDSFMNVLGMLEADLGPAGKVSVEVLQA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           +   C ED+G AR LTE++A+ ++AAAL       IA+ F+E R      S++ ML  R+
Sbjct: 479 AARTCLEDEGGARLLTEQLAITAAAAALKEVAPAAIANAFIETRMAGQWRSSYGMLDARY 538

Query: 550 NAAHIIDSLY 559
           +A  I++ LY
Sbjct: 539 DAMGILEWLY 548


>gi|328543470|ref|YP_004303579.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413214|gb|ADZ70277.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 542

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/543 (42%), Positives = 321/543 (59%), Gaps = 7/543 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARM 76
           P ++    NQPP + G N  +SD LL+A   A         L   G  + S    +L R+
Sbjct: 3   PFETHEVFNQPPRYGGGNLATSDPLLIAAHGAALDEATGAALAAHGAALGSLDVLDLGRL 62

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+ + P L  +   G R+D VE+HPA+HAL+RRS+  GLH +  D    P  R      R
Sbjct: 63  ADEHAPVLKTHDIHGRRFDVVEYHPAYHALMRRSVEAGLHAASLDDGPWPQTR------R 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A R ++ +Q E GH    ++T+A+   L    +  + W P + SR YD       QK  V
Sbjct: 117 AGRYFVTSQAETGHCCPITMTNAAGAVLKAHAQPAEGWLPLLRSRHYDQRFVPMAQKRGV 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             G+GLTEK+GGTD+ AIT+  +   DG+Y L+GHKWFLS+PMSDAF++LA+ E   GCF
Sbjct: 177 TFGMGLTEKQGGTDLRAITTVAEPSGDGLYVLTGHKWFLSAPMSDAFLVLAKTERGPGCF 236

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR L DG+ NGL +QRLK K+GNRSNA+ E+EF +  G L+G+       + DM +  
Sbjct: 237 LVPRFLPDGTVNGLRFQRLKAKLGNRSNASTEVEFQHAGGLLIGEEGRGIATILDMVVPT 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +D A+ S + MR ++A A+H+ R R   G  L+DQP+M R +AD+ALD+AAATAL+FRL
Sbjct: 297 RIDCALGSAAQMRAAVARAVHHCRHRQAFGARLVDQPLMTRVLADMALDVAAATALAFRL 356

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + D     + EAAY R+M P  KYW CK AP +  EAMEC+GG+GY+E+  +AR YR+
Sbjct: 357 VRAADCMADDAAEAAYVRLMTPAIKYWICKAAPLLTYEAMECLGGNGYVEDFDMARLYRD 416

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P N+I  GSGN M LDVL  LE+     E + +     LG  G     ++  +    +E
Sbjct: 417 APVNAIWEGSGNVMALDVLRALERTPAALEAVLAEFAGRLGRGGAAAGEVIAAAARAARE 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           D    R LTE++AL  +AAAL       +AD F+E+R      S++ ML GR NA  +++
Sbjct: 477 DPSNGRILTEQLALTGAAAALRAIAPEPVADAFIESRLAGQWRSSYGMLPGRHNARRLVE 536

Query: 557 SLY 559
           +LY
Sbjct: 537 ALY 539


>gi|154253277|ref|YP_001414101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157227|gb|ABS64444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 563

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 314/558 (56%), Gaps = 16/558 (2%)

Query: 13  NQVHQPSDSLFA----LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLS 67
             V  P+D  FA     NQPP    +N ++SD  L   +A          L   G+ V S
Sbjct: 3   KHVETPAD--FATHEVFNQPPPLEDVNLFTSDKALRETVAREGAGDAEASLTAFGKIVGS 60

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD---RSF 124
               +L R AN   P L ++   G R D+VEFHP++H L+  S+  GLH S WD      
Sbjct: 61  AETIDLGRQANAYLPVLKSFDRFGHRADRVEFHPSYHKLMAISVAQGLHGSPWDHLKNGL 120

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +   +  A   R A  Y+M Q+EAGH    ++T+AS+ AL+  P + K+W P+I SREYD
Sbjct: 121 DASPKPGAVVARLAGTYMMTQVEAGHGCPITMTNASVPALLFQPSLAKEWIPRILSREYD 180

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMS 240
                  +K  V +G+G+TEK+GGTD+ A T++   ++ G     Y ++GHKWF S+PM 
Sbjct: 181 ERFIPAGEKAGVTLGMGMTEKQGGTDVRANTTEAVPVNGGGPGAEYRITGHKWFFSAPMC 240

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           DAF++LAQ    + CFL+PR   DG PN +  QRLK+K+GN+SNA+ E+EF    G+L+G
Sbjct: 241 DAFLVLAQAPNGISCFLMPRFTPDGEPNAIRIQRLKDKVGNKSNASSEVEFQAASGWLIG 300

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +M     LD A+ +   MR ++++A+H+   R V    LIDQP+M   +A
Sbjct: 301 EEGRGVRNIIEMATYTRLDCAVATAGMMRQAVSQAVHHCSYRTVFQKKLIDQPLMANVLA 360

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+AL+  AATALSFR+A SFD A     EAA+ RIM P+ KYW CK AP +  EAMEC+G
Sbjct: 361 DLALETEAATALSFRVARSFDRAHEDEAEAAFRRIMTPVAKYWVCKRAPNLAYEAMECLG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GY+EE    R YRE P N+I  GSGN M LDVL  L +     + +F+ L++  G++ 
Sbjct: 421 GNGYVEEGIAGRIYREMPVNAIWEGSGNVMCLDVLRALMREPQALDVVFAELDRAKGANA 480

Query: 481 --KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
                +  L+++ +     +G +R + E++A  ++ + L +   + ++D +   R   + 
Sbjct: 481 AYDGALDALKEAFADFGSLEGRSRQVVEQMAKVAAGSVLLQHAPSFVSDAYCATRLGRDW 540

Query: 539 HSTHCMLHGRFNAAHIID 556
              +  L    + A I++
Sbjct: 541 GDLYGTLPAGADIAAIVE 558


>gi|222874481|gb|EEF11612.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 181/357 (50%), Positives = 256/357 (71%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M+ P + + WAP++ +R+YD  N+   QK  V +G+G+TEK+GGTD+ A T++ +   +G
Sbjct: 1   MSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGMTEKQGGTDVRANTTRAEPAGEG 60

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +Y L+GHKWF+S+PMSD F++LAQ E  + CFL+PR+ +DG+ NG  +QRLK+K+GNRSN
Sbjct: 61  LYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVTDDGATNGFRFQRLKDKLGNRSN 120

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           A+ E+EF    G+L+G+       + DM  L  LD A+ S   MR +LAEA+H+AR R V
Sbjct: 121 ASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCALASSGLMRAALAEAVHHARHRSV 180

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L +QP+M R +AD+ALD+AAATAL+FRLA SFDEA +   EAAYAR+M P+TKYW 
Sbjct: 181 FGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDEAANGRAEAAYARVMTPVTKYWV 240

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           CK+APAVI EAMEC+GG+GY+EE  +AR+YRE+P N+I  GSGN M LDVL +L +   L
Sbjct: 241 CKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAIWEGSGNVMALDVLRVLSRNAGL 300

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           F+ +   +  DLG +G   + +L  ++ +C+ D+G  R LTE++ALA++AA L R G
Sbjct: 301 FDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGRILTEQLALAAAAAELKRLG 357


>gi|146341411|ref|YP_001206459.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146194217|emb|CAL78239.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation
           damage) [Bradyrhizobium sp. ORS278]
          Length = 547

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 195/458 (42%), Positives = 278/458 (60%), Gaps = 4/458 (0%)

Query: 17  QPS-DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           QPS ++    NQ P F  +N +++D  L+ A+ AN  S   +EL   G+   S    E  
Sbjct: 3   QPSLETHEVFNQSPPFADVNLFTADRPLMDAVAANGGSGAEQELIAFGKLWGSAEMAEQG 62

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+AN NTP+L ++   G R D VEFHPA+H ++ +++  GLH S W    +PV    A  
Sbjct: 63  RLANENTPKLRSFDAKGFRRDAVEFHPAYHHMMAQAVAAGLHNSTWTAQGKPV-GGSAEV 121

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +RAA+ Y+ +Q+E+GHL   ++T AS+ AL   P +       I +R+YDP      QK 
Sbjct: 122 VRAAKFYVASQVESGHLCPITMTRASVAALAPQPDLLAQTMRVIATRDYDPAFAPWWQKR 181

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + +G+G+TEK+GGTD+ A  +   + +DG Y ++GHKWF+S+PM DAF++LAQ EG + 
Sbjct: 182 GMTLGMGMTEKQGGTDVRANMTSATRSTDG-YRITGHKWFMSAPMCDAFLVLAQAEGGLT 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR   DG+ N L +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  
Sbjct: 241 CFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAERVGEEGRGISTIIQMVQ 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D AI S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + A  AL  
Sbjct: 301 LTRQDCAISSAGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLADMALHVEATVALVM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +FD     ++EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +ARHY
Sbjct: 361 RLCRAFDRMTDDADEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILARHY 420

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           RESP N+I  GSGN M LDVL  L +       + +TL
Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSREPEAAAAVLNTL 458


>gi|299135139|ref|ZP_07028330.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590116|gb|EFI50320.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 543

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/437 (44%), Positives = 267/437 (61%), Gaps = 3/437 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ P F  +N +  D  L+  ++ + +  H +EL L G    S    E  R+AN N P+
Sbjct: 8   LNQSPPFCDINLFGCDVPLMEAVSAYGARDHAEELSLFGRLWGSAAMAERGRLANENPPK 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G R D+VEFHPA+H L+  S H GLH S W  +        A  +RAA+ ++ 
Sbjct: 68  LKTYDARGFRRDEVEFHPAYHELMAHSAHAGLHNSTWSGAGT-SAGGAAEVVRAAKFFIA 126

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL +   +     P + +  YDP      QK  + IG+G+T
Sbjct: 127 AQVETGHLCPITMTRASVAALASDEALRVQIMPVLGTNVYDPAFMPWWQKRGMTIGMGMT 186

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ A  ++ ++  D  Y ++GHKWF+S+PMSDAF++LAQVEG + CF++PR   
Sbjct: 187 EKQGGTDVRANVTRAEREGD-YYRITGHKWFMSAPMSDAFLVLAQVEGGLTCFVMPRFAP 245

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ N L +QRLK+K+GNRSNA+ E+EF   +   LG+       +  M  L   D AI 
Sbjct: 246 DGTVNALRFQRLKDKLGNRSNASSEVEFEGAYALRLGEEGRGIATIIQMVSLTRQDCAIA 305

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR  LA A+H+AR R V G  L DQP+M+  +AD+AL + A TAL  RL  +FD A
Sbjct: 306 SAGLMRSGLAHALHHARHRSVFGRHLADQPLMRSVLADMALHVEATTALVMRLCRAFDHA 365

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E+A  R+M P+ KYW CK APA + EAMEC+GG+GY+EE  +ARHYRE+P N+I 
Sbjct: 366 PHDPVESATMRLMTPVVKYWVCKSAPAFLHEAMECLGGNGYVEEGILARHYREAPVNAIW 425

Query: 444 LGSGNAMVLDVLNLLEK 460
            GSGN M LDVL ++ +
Sbjct: 426 EGSGNVMCLDVLRVVSR 442


>gi|86749547|ref|YP_486043.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86572575|gb|ABD07132.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 549

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/484 (40%), Positives = 281/484 (58%), Gaps = 4/484 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P F  ++ + +D  LV A+  N     H ELE  G    S    E  R+AN  TP+
Sbjct: 12  FNQSPPFEEVDLFGTDRPLVEAVTFNNGGHAHVELEAFGRNWGSAHMAERGRLANEQTPK 71

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+H L+  S H G+H S WD + +P     A  +RAA+ Y+ 
Sbjct: 72  LKTFDAKGLRRDQVEFHPAYHELMSESFHAGIHNSTWDHNGQPA-GGSAEVVRAAKFYMA 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL   P +     P + S+ YDP      +K  +++G+G+T
Sbjct: 131 AQVETGHLCPVTMTRASVAALAAQPELLAQIMPVLSSKRYDPAFAPWSEKRGMSVGMGMT 190

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ +  ++  +  D  Y + GHKWF+S+PM DAF++LAQ E  + CF +PR   
Sbjct: 191 EKQGGTDVRSNATRAIRDGDA-YRIIGHKWFMSAPMCDAFLVLAQAEEGLSCFFMPRFKP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  L   D AI 
Sbjct: 250 DGSINDIQFQRLKDKLGNRSNASSEVEFTGAYAVPVGEPGRGIRTIIQMVQLTRQDCAIA 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR  LA A+H+AR R V    LID  +M+  +AD+AL + A+ AL  RL  +FD+A
Sbjct: 310 SAGLMRSGLAHALHHARHRSVFQKHLIDHSLMQSVLADMALQVEASVALVMRLCRAFDQA 369

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAAY R+M P  KYW CK AP  + EAMEC+GG+GY+E+  +ARHYRE+P N+I 
Sbjct: 370 PHDHLEAAYMRLMTPAVKYWVCKSAPPFLYEAMECMGGNGYVEDGILARHYREAPVNAIW 429

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLAR 502
            GSGN M LDVL  + + ++   ++  +L QD  G +G      L     L  +++  AR
Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQSLIQDTAGLTGGPAAASLVARAFLQADNERTAR 489

Query: 503 FLTE 506
              E
Sbjct: 490 LAVE 493


>gi|254503843|ref|ZP_05115994.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439914|gb|EEE46593.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 559

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 215/536 (40%), Positives = 313/536 (58%), Gaps = 7/536 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P + G N  + D LL+A ++   S    K++   G  V +    EL R AN + P 
Sbjct: 26  FNQAPPYGGSNLAAGDPLLLATVSAHVSAWELKDVLAHGAEVGAEAFLELGRQANIHLPA 85

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+H L+  S   G+H ++ D      +      +RAA+ +L 
Sbjct: 86  LKTHDRHGRRLDQVEFHPAYHDLMAHSFSAGMHSALLDGGVSTQL------VRAAKFFLT 139

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q E GH    ++T+A+   +   P V  D  PK+ +R YDP      +KT + IG+G+T
Sbjct: 140 SQAETGHTCPITMTNAAAAVMAQYPDVCADLLPKMQTRTYDPRFLPMHEKTGITIGMGMT 199

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ AI+S  +  + G Y ++GHKWF S+PM DAF++LA+      CFL+PR+L 
Sbjct: 200 EKQGGTDLRAISSTAEAGNQGSYAITGHKWFFSAPMCDAFLVLAKTANGPSCFLIPRILA 259

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  NGL +QRLK+K+GN+SNA+ E+EF    G+LLGD       + DM     +D A+ 
Sbjct: 260 DGRVNGLRFQRLKDKLGNKSNASSEVEFHRAEGYLLGDEGRGIATIIDMVTPTRIDCALG 319

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR +++ A+H+ R R   G  LIDQP+M   +AD+ALD+AAATAL+ RL  +  + 
Sbjct: 320 SAGQMRAAVSRAVHHCRHRKTFGAYLIDQPLMTAVLADMALDVAAATALALRLVRAAAKV 379

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++   EAAYAR++ P  KYW CK  PA+  EAMEC+GG+GY+E+  +AR YR++P N I 
Sbjct: 380 ETDPVEAAYARLLTPAIKYWICKTGPALTYEAMECLGGNGYVEDYDMARIYRDAPVNPIW 439

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GSGN M LDVL  L +       + S L +  G+S     + L    +    D   AR 
Sbjct: 440 EGSGNVMALDVLRALGRHPEAPNLVLSELSKSGGASLSAACSGLPSLAAQALADPAHARV 499

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           LTE++AL ++ AAL    ++D+AD F + R      ST+ +L    +AA I++SLY
Sbjct: 500 LTERLALTAAVAALKELQLDDVADAFAKTRLSGGWRSTYGILPAGIDAAGILESLY 555


>gi|209884925|ref|YP_002288782.1| protein AidB [Oligotropha carboxidovorans OM5]
 gi|209873121|gb|ACI92917.1| protein AidB [Oligotropha carboxidovorans OM5]
          Length = 537

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 192/451 (42%), Positives = 267/451 (59%), Gaps = 3/451 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ P F  ++ ++ D  L   +A + +  H  EL   G+   S    EL R+AN N P+
Sbjct: 2   LNQSPPFCDVDLFACDVPLKEAVAAYGAKDHTTELSAFGKLWGSAEMAELGRLANENLPK 61

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+H L+  S H GLH S W  S        A  +RAA+ ++ 
Sbjct: 62  LQTFDARGFRRDEVEFHPAYHELMAVSAHAGLHNSTWASS-GAAAGGNAEVLRAAKFFIA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL +   +     P +  R YDP       K  + IG+G+T
Sbjct: 121 AQVETGHLCPITMTRASVAALASNEALRARIMPVLSQRAYDPGFAPWWGKRGMTIGMGMT 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E++GGTD+    S+ ++  +  Y + GHKWF+S+PM DAF++LAQ +G + CF +PR   
Sbjct: 181 ERQGGTDVRVNISRAERDGEA-YRIIGHKWFMSAPMCDAFLVLAQTDGGLTCFFMPRFTP 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  N L +QRLKNK+GNRSNA+ E+EF   +   LG+       +  M  L   D AI 
Sbjct: 240 DGEINALHFQRLKNKLGNRSNASSEVEFEAAYALRLGEEGRGVATIIQMVSLTRQDCAIA 299

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + AATAL  RL  +FD A
Sbjct: 300 SAGLMRSGLAHALHHARHRSVFQKRLADQPLMRSVLADMALQVEAATALVMRLCRAFDRA 359

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   E A  R+M P+ KYW CK APA + EAMEC+GG+GY+EE  +ARHYRE+P N+I 
Sbjct: 360 STDPNENATMRLMTPVVKYWVCKSAPAFLYEAMECLGGNGYVEEGILARHYREAPVNAIW 419

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            GSGN M LDVL ++ +   + E + + LE+
Sbjct: 420 EGSGNVMCLDVLRVMTREREVAEAVLADLER 450


>gi|27380208|ref|NP_771737.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27353362|dbj|BAC50362.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 547

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 190/446 (42%), Positives = 271/446 (60%), Gaps = 4/446 (0%)

Query: 17  QPSDSLF-ALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELA 74
           QPS +     NQ PLF  ++ ++ D  LV A+ AN  +   +EL   G++  S    +  
Sbjct: 3   QPSFATHEVFNQSPLFWDVDLFAVDRPLVEAVKANGGAKAERELSEFGKHWGSAAMADRG 62

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+AN NTP+L  +   G R D+VEFHPA+H L+  S H G+H S W    +P     A  
Sbjct: 63  RVANENTPKLRTFDAKGNRRDQVEFHPAYHELMAHSAHAGVHNSTWTADGKPA-GDAAEV 121

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           IRAA+ Y+ +Q+E GHL   ++T AS+ AL T P +     P + ++ YDPT      K 
Sbjct: 122 IRAAKFYIASQVETGHLCPITMTRASVAALATQPDLLARVMPVLATKSYDPTFAPWWGKR 181

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + +G+G+TEK+GGTD+ A  ++  +  D  Y ++GHKWF+S+PM DAF++LAQ +  + 
Sbjct: 182 GMTLGIGMTEKQGGTDVRANMTRAVRDGDA-YRITGHKWFMSAPMCDAFLVLAQADEGLT 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  
Sbjct: 241 CFFMPRFAPDGSVNAIQFQRLKDKLGNRSNASSEVEFAGAYAQAVGEAGKGIRTIIQMVQ 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D AI S   MR  LA A+H+AR R V    L DQP+M+  ++D+AL + A+ AL  
Sbjct: 301 LTRQDCAIASTGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLSDMALHVEASVALVM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +FD     + EAAY R++ P  KYW CK AP+ + EAMEC+GG+GY+E+  +ARHY
Sbjct: 361 RLCRAFDRTPHDAAEAAYMRLLTPAIKYWTCKSAPSFLYEAMECLGGNGYVEDGILARHY 420

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           RESP N+I  GSGN M LDVL  L +
Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSR 446


>gi|92117804|ref|YP_577533.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91800698|gb|ABE63073.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 547

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 188/432 (43%), Positives = 263/432 (60%), Gaps = 3/432 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P    ++ ++ D+ L  A+ AN       EL   G +  S       R+AN N P+
Sbjct: 12  FNQSPPLEDVDLFALDAPLAEAVAANGGKAASGELSEFGRHWGSAAMASRGRLANENPPK 71

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+H L+  S H GLH S W    +P     A  +RAAR Y+ 
Sbjct: 72  LRLFDACGNRRDEVEFHPAYHELMAHSAHAGLHNSTWTADGKPA-GGAAEVVRAARFYMA 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL T P+V     P I +R YDP+      K  + +G+G+T
Sbjct: 131 AQVETGHLCPITMTRASVAALATGPQVLAKAMPLIATRSYDPSFAPWSTKRGMTLGMGMT 190

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ A  ++ ++   G Y ++GHKWF+S+PM DAF++LAQ +G + CF +PR   
Sbjct: 191 EKQGGTDVRANQTRAER-DGGAYRITGHKWFMSAPMCDAFLVLAQADGGLTCFFMPRFQP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  L   D AI 
Sbjct: 250 DGSVNEIHFQRLKDKLGNRSNASSEVEFTGAYAERVGEEGKGIRTIIQMVQLTRQDCAIA 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV  MR  LA A+H+ R R V    L DQP+M+  +AD+AL + A+ AL  RL  +FDEA
Sbjct: 310 SVGLMRSGLAHALHHTRYRSVFQKHLADQPLMQAVLADMALHVEASVALVMRLCRAFDEA 369

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + ++ AA+ R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +ARHYRE+P N+I 
Sbjct: 370 STDAKAAAWMRLLTPAVKYWTCKSAPGFLYEAMECLGGNGYVEESILARHYREAPVNAIW 429

Query: 444 LGSGNAMVLDVL 455
            GSGN M LDVL
Sbjct: 430 EGSGNVMCLDVL 441


>gi|91977493|ref|YP_570152.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683949|gb|ABE40251.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 551

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/495 (40%), Positives = 288/495 (58%), Gaps = 10/495 (2%)

Query: 19  SDSLFA----LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQEL 73
           ++S+FA     NQ P F  ++ + +D  LV  +A N  S  H ELE  G    S    + 
Sbjct: 4   TESVFATHEVFNQSPPFEDVDLFGADRPLVEAVALNQGSYAHVELEAFGRNWGSAHMADR 63

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN ++P+L ++   G+R D+VEFHPA+H L+  S H G+H S WD    P     A 
Sbjct: 64  GRLANEHSPRLKSFDAKGQRRDQVEFHPAYHELMSESFHAGIHNSTWDGRGRPA-GGSAE 122

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +RAA+ Y+ AQ+E GHL   ++T AS+ A+   P +     P + ++ YD       +K
Sbjct: 123 VVRAAKFYMAAQVETGHLCPVTMTRASVAAIAAQPDLLAQVMPVLGTKRYDSAFAPWSEK 182

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             ++IG+G+TEK+GGTD+ +  ++   I DG  Y + GHKWF+S+PM DAF++LAQ +  
Sbjct: 183 RGMSIGMGMTEKQGGTDVRSNATRA--IRDGEAYRIIGHKWFMSAPMCDAFLVLAQADEG 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 241 LSCFFMPRFKPDGSVNDIQFQRLKDKLGNRSNASSEVEFAGAYAVPVGEPGRGIRTIIQM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR  LA A+H+AR R V    LID  +M+  +AD+AL + A  AL
Sbjct: 301 VQLTRQDCAIASAGLMRSGLAHALHHARHRSVFQKHLIDHSLMRSVLADMALQVEATVAL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FD+A     EAAY R+M P  KYW CK AP ++ EAMEC+GG+GY+E+  +AR
Sbjct: 361 VMRLCRAFDQAPHDHLEAAYMRLMTPAVKYWVCKSAPPLVYEAMECLGGNGYVEDGILAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSI 491
           HYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD  G +G      L    
Sbjct: 421 HYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQGLIQDTAGLTGGPAAASLVARA 480

Query: 492 SLCKEDKGLARFLTE 506
            L  +++  AR   E
Sbjct: 481 FLQADNERTARLAVE 495


>gi|302549579|ref|ZP_07301921.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
 gi|302467197|gb|EFL30290.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
          Length = 555

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 205/511 (40%), Positives = 283/511 (55%), Gaps = 7/511 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P     +A    +LL  L         +EL  LG    S  AQE A +AN + P+L 
Sbjct: 21  NQAPPLAPYDASDDPALLEGLRREGAGWAEEELRRLGRQAGSAQAQEWADLANRHEPELR 80

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP+WH L+R +I +GL  S W        R  AH  R+A   +   
Sbjct: 81  THDRYGNRVDEVEFHPSWHHLMRTAIAEGLAASPWADD-----RPGAHVARSAGGLVWGH 135

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            EAGH    S+T A++ AL   P + K + P + SREY+P  + P +K  +  G+G+TEK
Sbjct: 136 TEAGHGCPTSMTYAAVPALRRQPELAKVYEPLLTSREYEPGLRVPSEKRGLLAGMGMTEK 195

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 196 QGGSDVRTNTTTATPTAESGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 255

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  +MS
Sbjct: 256 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 315

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            + MR SL EA H+AR R   G  L+DQP M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 316 AALMRKSLVEAGHHARHRSAFGARLVDQPAMRNVLADLALESEAATTLTLRLAGAADRAI 375

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E+A+ RI   + KYW  K  PA  AEA+EC+GG+GY+E+  + RHYRE+P  SI 
Sbjct: 376 RGDAGESAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIW 435

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GSGN   LDVL  L +     E LF+ L    G+  +    + R    L +  +  AR 
Sbjct: 436 EGSGNVNALDVLRALSREPGTAEALFAELALARGADARLDAAVTRLRNRLPEASQATARR 495

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L E+ AL   A+ L R     +AD F   R 
Sbjct: 496 LVEQTALTLQASLLVRHAPPAVADAFCATRL 526


>gi|148256072|ref|YP_001240657.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146408245|gb|ABQ36751.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation
           damage) [Bradyrhizobium sp. BTAi1]
          Length = 547

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 192/461 (41%), Positives = 270/461 (58%), Gaps = 4/461 (0%)

Query: 17  QPS-DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELA 74
           QPS ++    NQ P F  +N +++D  LV A+ A   +    EL   G    S    E  
Sbjct: 3   QPSFETHDVFNQSPPFADVNLFTADRPLVDAVTAYGAAGTEPELAAFGALWGSAEMAEQG 62

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+AN NTP+L ++   G R D VEFHPA+H ++ R++  GLH S W     P     +  
Sbjct: 63  RLANENTPKLRSFDAKGFRRDVVEFHPAYHQMMARAVEAGLHNSTWTSEGRPR-GAPSEV 121

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +RAA+ Y+ AQ+E+GHL   ++T AS+ AL   P +     P I +R YD       QK 
Sbjct: 122 VRAAKFYIAAQVESGHLCPITMTRASVAALAAQPDLLAKSMPVIATRHYDAAFAPWWQKR 181

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + +G+G+TEK+GGTD+ A  +  ++  DG Y ++GHKWF+S+PM DAF++LAQ E  + 
Sbjct: 182 GMTLGMGMTEKQGGTDVRANMTTAERAGDG-YRITGHKWFMSAPMCDAFLVLAQAESGLT 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR   DG+ N L +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  
Sbjct: 241 CFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAVRVGEEGRGIRTIIQMVQ 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D AI S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + A  AL  
Sbjct: 301 LTRQDCAISSAGLMRSGLAHALHHARHRSVFQKRLADQPLMQAVLADMALHVEATVALVM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +FD      +EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +ARH+
Sbjct: 361 RLCRAFDRTPDDLKEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILARHF 420

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           RESP N+I  GSGN M LDVL  L +  +    +   L  D
Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSREADAAMAILKYLAAD 461


>gi|271967959|ref|YP_003342155.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270511134|gb|ACZ89412.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 539

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 204/535 (38%), Positives = 290/535 (54%), Gaps = 8/535 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ P   G +  +  +LL  L          EL  LG    S  A E  R+AN + P L
Sbjct: 6   FNQAPPLTGHDVSADAALLAGLAREDAGWATGELHRLGTLAGSDQAGEWGRLANEHPPVL 65

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPAWH L+  ++ +GLH + W  +     R  AH  RAA+ Y+ +
Sbjct: 66  RTHDRYGHRIDEVEFHPAWHELMTVAVENGLHATPWSSA-----RPGAHMARAAKFYVWS 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    S+T AS+ AL  +P +  DW P + SR YD   + P+ K  V  G+ +TE
Sbjct: 121 QVEAGHGCPISMTYASVAALRHSPALAADWEPALASRSYDFGLRPPLGKRGVLAGMAMTE 180

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++ + +SDG Y L+GHKWF S+PM D F++LAQ  G + CFL+PR+L D
Sbjct: 181 KQGGSDVRAGTTRAEPLSDGSYALTGHKWFNSAPMCDVFLVLAQAPGGLSCFLLPRVLPD 240

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +   RLK+K+GNRSNA+ E+E+     +L+G+       + +M  +  LD  I S
Sbjct: 241 GTRNAVHLMRLKDKLGNRSNASAEVEYHGAVAWLVGEEGRGVRTILEMVNMTRLDCVIGS 300

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +GMR  +  A+H+A  R   G  LIDQP+M+  +AD+AL+  AAT L  RLA + D A 
Sbjct: 301 AAGMRYGVTRAVHHAAHRGAFGRKLIDQPLMRNVLADLALESEAATTLMTRLAGATDRAI 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E+A  R    + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP N I 
Sbjct: 361 AGDRAESALRRTALAVGKYWVCKRGPVHAAEALECLGGNGYVEESQMPRLFRESPLNGIW 420

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLA 501
            GSGN   LDVL  L +     E  F+ +    G+          LR S+    + +  A
Sbjct: 421 EGSGNVAALDVLRALGREPEALEAFFAEVSLAAGADRHLDDAADRLRKSLGDLTDIEARA 480

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E +AL   A+ L R     +AD F  +R           L  R +   +I+
Sbjct: 481 RRVAEDMALVLQASLLVRLAPPAVADAFCASRLAGEAGRAFGTLPPRLDLDALIE 535


>gi|331694767|ref|YP_004331006.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326949456|gb|AEA23153.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 704

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 204/515 (39%), Positives = 292/515 (56%), Gaps = 14/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G +  + D  LV A+           +  LGE + S   +E AR+AN N P L
Sbjct: 176 NQPPPLSGYDPLACDPALVDAVEREGAGGALPTMRQLGERIASPEYREHARLANENHPIL 235

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHP+WHAL+  S+  GLH + W    +P     AH  RAA  YL+ 
Sbjct: 236 RTHDRYGHRVDEVEFHPSWHALMDLSVGWGLHAAPW--LADPGT--GAHVARAAGFYLVG 291

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE GH    S+T AS+ AL     +   + P + +REY P    P  KT +  G+ +TE
Sbjct: 292 QLEQGHCCPISMTYASVPALRHDDELAAAYVPGLTAREYQPGLARPDSKTGLLAGMSMTE 351

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+     SDG Y L+GHKWF S+PM+D F+ LAQ    + CF++PR+L D
Sbjct: 352 KQGGSDVRAGTTVATPSSDGTYRLTGHKWFTSAPMNDLFLTLAQAPAGLTCFVLPRVLPD 411

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLK+K+GNRSNA+ ELE+ +  G+ LG+       + +M  +  LD  I S
Sbjct: 412 GTRNAIRLQRLKDKLGNRSNASAELEYDDAVGWRLGEEGRGVVTIIEMVSMTRLDCVIGS 471

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            S +R +L EA+H+   R   G  L+DQP+M+  +AD+AL+  AATAL+ RLA + D   
Sbjct: 472 ASVIRAALTEAVHHVTHRRAFGERLVDQPLMQAVVADLALESEAATALTMRLAGAVDRG- 530

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  + R+  P +KY  CK APAV+AEA+EC+GG+GY+EE  + R YRE+P NS+  
Sbjct: 531 ----ETDFLRLALPASKYLVCKRAPAVVAEALECLGGNGYVEESGMPRLYREAPLNSVWE 586

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  + +  +  E +   ++   G+     +  T LR    L   ++  AR
Sbjct: 587 GSGNVTALDVLRAVTREPDSQEAVLREIDAAAGADSWFDRARTELR--TELRSREQRTAR 644

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            L E +AL    + L R    ++A  F+ +RFL +
Sbjct: 645 RLAELLALCMQGSLLLRFAPEEVASAFVSSRFLPD 679


>gi|170740350|ref|YP_001769005.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194624|gb|ACA16571.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 538

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 194/432 (44%), Positives = 261/432 (60%), Gaps = 6/432 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ   F  +N  ++D+ L  AL AN        L   G    +    E  R+AN N P+
Sbjct: 7   LNQSTPFADVNLIAADAPLRGALRANGVDPDEPGLAAFGAEWGAAERLEGGRLANENPPR 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+HAL+R S+  GLH S+WD +   +   + H  RAARLY +
Sbjct: 67  LRTHDASGRRADRVEFHPAYHALMRASVGAGLHASLWDGAAPALPFGRGHVARAARLYAV 126

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +E+GHL   ++TSA++ AL   P     W P++ SR YDP  +   +K  V +G+G+T
Sbjct: 127 AGVESGHLCPMTMTSAAVAALAAAPDHLAAWWPRLTSRRYDPEFRPWFEKAGVTLGMGMT 186

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ A T+  +   D +Y L+GHKWF S+PM DAF++LAQ    + CFLVPR   
Sbjct: 187 EKQGGTDVRANTTAARPAGDDVYHLTGHKWFFSAPMCDAFLVLAQAPDGLSCFLVPRHRP 246

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           D S N L  QRLK+K+GNRSNA+ E+EF   FG+ LG+       +  M  L  LD A+ 
Sbjct: 247 DRSVNALRLQRLKDKLGNRSNASAEVEFEEAFGWRLGEEGRGLRTILAMVQLTRLDCAVA 306

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S    R++LA A+H+AR R   G  L DQP M+  +AD+AL + A  AL  RL+ SFD  
Sbjct: 307 SAGLGRMALALALHHARHRSAFGRPLADQPAMRAVLADLALAVEAQVALVMRLSASFDRG 366

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EA  AR++ P  KY  CK AP ++AEAMEC+GG+GY+EE  + R YRE+P N+I 
Sbjct: 367 -----EAVRARLLTPAAKYAVCKAAPGLVAEAMECLGGNGYVEENPLPRLYREAPVNAIW 421

Query: 444 LGSGNAMVLDVL 455
            GSGN M LDVL
Sbjct: 422 EGSGNVMALDVL 433


>gi|239995841|ref|ZP_04716365.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii ATCC 27126]
          Length = 535

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 202/524 (38%), Positives = 299/524 (57%), Gaps = 15/524 (2%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEY--VLSCTAQELARMANYNTP 82
           NQP +    N +  D+LL V ++ + PS    +  LLG+Y  +          +AN N P
Sbjct: 14  NQPTISTPYNLWRDDTLLRVLVVQHLPSSHQHDEGLLGQYGQIAGDALMAHGELANKNKP 73

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            LH +   G R D VEFHP++HAL+  ++    H   W    E +  + AH  RAA +Y+
Sbjct: 74  TLHTFDRYGRRIDDVEFHPSYHALMESAMQHNAHNYSWKH--EGI--EGAHTFRAALMYM 129

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
             Q E+G     ++T A++ A+    ++   +  K  +  YDP +    QK  + IG+G+
Sbjct: 130 HYQAESGTSCPLTMTHAAIPAMRYGKQLPPVYLEKTINGVYDPRSLPASQKHGLTIGMGM 189

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+   T+   K +DG Y + GHK+F S+PM DA ++LAQ EG + CFL+PRLL
Sbjct: 190 TEKQGGSDVRRNTTTAVKQADGSYHIVGHKFFFSAPMCDAHLILAQAEGGLSCFLLPRLL 249

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           E+G+ N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD  I
Sbjct: 250 ENGALNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVPVIIDMVSLTRLDCMI 309

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S + MR SL  A+H+   R   G  L++QP+M+  +AD+ ++ AAATAL+ R+A + D 
Sbjct: 310 GSSALMRQSLIHALHHVSHRDAFGKTLVNQPLMQNVLADLTIECAAATALTMRVAKAVDS 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A S + EAA AR+   I KYW CK  P  + EA EC+GG GY+EE  + R+YR++P NSI
Sbjct: 370 ASSDNHEAALARLATAIGKYWVCKRTPMFVNEAQECLGGIGYVEENPMPRYYRQAPLNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGL 500
             GSGN   LDVL  L K  ++ E LFS L+   G +    I +  L D +S  +  +  
Sbjct: 430 WEGSGNVQCLDVLRALAKEPSVKEALFSELKTQAGKNKHYDIHLSKLFDELSNTQNMETR 489

Query: 501 ARFLTEKIALASSAAALYRAGMN------DIADVFLENRFLDNC 538
           +R+LTE++ALA  A +L    +N      DIA  F E+R  + C
Sbjct: 490 SRYLTEQMALALQACSLLATSLNNDNALIDIAHTFCESRLGNAC 533


>gi|239983292|ref|ZP_04705816.1| putative oxidoreductase [Streptomyces albus J1074]
 gi|291455120|ref|ZP_06594510.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358069|gb|EFE84971.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 545

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 203/514 (39%), Positives = 288/514 (56%), Gaps = 12/514 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G +  + D +L+  +    +  H  EL   G Y  S  AQ  A  AN + P+L
Sbjct: 13  NQAPPLTGHD-VADDPVLLEGVRREGAAWHLPELHRFGRYAGSEEAQHRADQANRHEPEL 71

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPA+HAL+  S+  GL  + W        R  AH  RAA   +  
Sbjct: 72  RTHDRYGHRVDEVEFHPAYHALMDASVSAGLAGAAWADE-----RTGAHVARAAGFMVAT 126

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +E GHL   S+T A + AL   P + K + P + SR YDP  + P  K  +  G+G+TE
Sbjct: 127 TVEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRTPAGKRGLLAGMGMTE 186

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ A T+   +  DG + L GHKWF S+PM+D F++LAQ  G + CFLVPR+L D
Sbjct: 187 KQGGTDVRANTTTATEQGDGTWLLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPD 246

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK+K+GNRSNA+ E EF  T  +L+GD       + +M  +  LD  + S
Sbjct: 247 GSRNTFRIQRLKDKLGNRSNASSEPEFDATVAWLVGDEGKGVRTIIEMVTMTRLDCVLGS 306

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +G R +L +A H+AR R V G  LIDQP+M+  +AD+AL+  AAT L+ RLA + D A+
Sbjct: 307 AAGTRAALVQAAHHARHRSVFGAKLIDQPLMRNVLADLALESEAATTLALRLAGAADRAR 366

Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+P N I 
Sbjct: 367 RDDPGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 426

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD---SISLCKEDKGL 500
            GSGN   LD+L  L +     E   + +E   G+  +++ T  R+    ++L ++ +  
Sbjct: 427 EGSGNVNALDMLRALAREPESLEAFRAEIEAASGAD-RRLDTAWRELQSRLTLTEDAELR 485

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           AR + E+ AL   A+ L R     +AD F  +R 
Sbjct: 486 ARRVIERAALVLQASLLVRHAPTPVADAFCASRL 519


>gi|126348365|emb|CAJ90087.1| putative oxidoreductase [Streptomyces ambofaciens ATCC 23877]
          Length = 567

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 199/511 (38%), Positives = 279/511 (54%), Gaps = 7/511 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP     +A+   +L   L         +EL  LG    S  AQE   +AN + P L 
Sbjct: 33  NQPPPLAPYDAFDDTALREGLRREGAGWAEEELRRLGRRAGSVAAQEWGDLANRHEPVLR 92

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 93  THDRYGNRVDEVEYHPSWHRLMRVAVGEGLAGAPWADD-----RPGAHVARTAGGLVWGH 147

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            EAGH    S+T A++ AL   P + K + P + SREY+P  + P +K  +  G+G+TEK
Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPDLAKVYEPLLTSREYEPGLRTPTEKRGLLAGMGMTEK 207

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+   T+      + G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 208 QGGSDVRTNTTAATPTGEPGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 267

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  + S
Sbjct: 268 GGRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMSS 327

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 328 ATLMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 387

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P  SI 
Sbjct: 388 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GSGN   LDVL  L +       LF+ L    G+  +    + R    L +  +  AR 
Sbjct: 448 EGSGNVNALDVLRALGRSPAAAHALFAELALARGADARLDTAVSRLESGLAEASETGARR 507

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L E++AL   A+ L R     +AD F  +R 
Sbjct: 508 LVEQMALTLQASLLVRHAPPAVADAFCASRL 538


>gi|220921092|ref|YP_002496393.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945698|gb|ACL56090.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 538

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 213/512 (41%), Positives = 295/512 (57%), Gaps = 7/512 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ P F+ +N  ++D+ L  AL AN        L   G    S    +L R+AN N P+
Sbjct: 7   LNQSPPFVDVNLVAADAALRGALGANGADPEDPALLAFGAAWGSAERLDLGRLANENPPR 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  + P G R D VEFHPA+HAL+  SI +GLH S+WD    P+   + H  RAARL+++
Sbjct: 67  LRTHDPRGRRADIVEFHPAYHALMGASIAEGLHASVWDGPAPPLPAGRGHLARAARLHIV 126

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +E+GHL   ++TSA++ AL  +P     W P+I +R YDP      +K  V +G+G+T
Sbjct: 127 AGVESGHLCPMTMTSAAVAALAASPDHLAAWWPRITARRYDPRFLPWFEKAGVTLGMGMT 186

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+ A +++ +      Y L+GHKWF S+PM DAF++LAQ    + CFLVPR   
Sbjct: 187 EKQGGTDVRANSTRAEPTGADTYALTGHKWFFSAPMCDAFLVLAQAPAGLACFLVPRHRP 246

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N L  QRLK+K+GNRSNA+ E+EF   FG+ +G+       +  M  L  LD A+ 
Sbjct: 247 DGSVNALELQRLKDKLGNRSNASSEVEFDRAFGWRIGEEGRGIRTILAMVQLTRLDCAVA 306

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S    R++LA A+H+A+ R V    L DQP M+  +AD+AL + A TAL  RLA SFD  
Sbjct: 307 SSGLARMALALALHHAQHRSVFQKRLADQPAMRGVLADLALAVEAQTALVMRLAASFDRG 366

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E A AR++ P  KY  CK APA++ EAMEC+GG+GY+EE  + R YRE+P N+I 
Sbjct: 367 -----EGARARLLTPAVKYAVCKAAPALVYEAMECLGGNGYVEESPLPRLYREAPVNAIW 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLAR 502
            GSGN M LDVL    +       L + L  +  G  G +             + +  AR
Sbjct: 422 EGSGNVMALDVLRAAARAPEEARSLLAELATEARGLPGAREAARDVAEALEAPDAEAQAR 481

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           F T ++A  + AAAL  +    IA+ + E R 
Sbjct: 482 FATGRLAALAGAAALATSAPPAIAEAYAETRL 513


>gi|39936178|ref|NP_948454.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39650033|emb|CAE28556.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 561

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/468 (40%), Positives = 274/468 (58%), Gaps = 4/468 (0%)

Query: 10  LAMNQVHQPSDSLF-ALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLS 67
           LA   + QPS +     NQ P    ++   +D  LL A+  N  +  H ELE  G+    
Sbjct: 8   LAGTAMTQPSFATHEVFNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGI 67

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E  R+AN  TP+L  +   G R D+VEFHP++H L+  S   GLH S WD   +P 
Sbjct: 68  TEMAERGRLANEYTPKLKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPA 127

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               +  +RAA+ Y+ AQ+E GHL   ++T AS+ AL + P +     P + +R+YDP+ 
Sbjct: 128 -GNASEVVRAAKFYMAAQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSF 186

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                K  ++IG+G+TEK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LA
Sbjct: 187 APWTAKRGMSIGMGMTEKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLA 245

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q +  + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+L     
Sbjct: 246 QADEGLSCFFMPRFQPDGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIR 305

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  L   D AI S   MR SLA A+H+ R R V    L D  +M   +AD+AL + 
Sbjct: 306 TIIQMVQLTRQDCAIASAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVE 365

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ AL  RL  +FDEA +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+
Sbjct: 366 ASVALVMRLCRAFDEAPNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVED 425

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
             +ARHYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD
Sbjct: 426 GILARHYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 473


>gi|239983095|ref|ZP_04705619.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 544

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 290/521 (55%), Gaps = 26/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + Y++D  L       L A        EL  LG    S  AQE   +AN N
Sbjct: 10  NQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEWGVLANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           +P LH +   G R D+V FHPAW  LL  ++  GL+ + W R          H  RAA  
Sbjct: 70  SPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA-WSR-------PGGHLRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL   P +   W P + SR YDP  +   +K  V  G+
Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEKAGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ    + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDGLSCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L+DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + DM     LD
Sbjct: 242 RVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++A+A H+A  R   GG+L D+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 302 CVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTLALRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D+      E A+ RI  P+ KYW  K   AV AEA+EC+GG+GY+EE  + R  RESP 
Sbjct: 362 YDDGS--EAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPRLLRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493
           NS+  GSGN   LDVL  + +         S +      +  L  + K+++T L D   +
Sbjct: 420 NSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTELADLDGI 479

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 480 ----EARARRLVERMALILQGSLLLRFAPPEVADAFCASRL 516


>gi|291454927|ref|ZP_06594317.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291357876|gb|EFE84778.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 557

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 290/521 (55%), Gaps = 26/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + Y++D  L       L A        EL  LG    S  AQE   +AN N
Sbjct: 23  NQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEWGVLANEN 82

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           +P LH +   G R D+V FHPAW  LL  ++  GL+ + W R          H  RAA  
Sbjct: 83  SPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA-WSR-------PGGHLRRAAGF 134

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL   P +   W P + SR YDP  +   +K  V  G+
Sbjct: 135 LVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEKAGVLFGM 194

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ    + CFLVP
Sbjct: 195 GMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDGLSCFLVP 254

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L+DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + DM     LD
Sbjct: 255 RVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDMVAATRLD 314

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++A+A H+A  R   GG+L D+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 315 CVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTLALRLAAA 374

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D+      E A+ RI  P+ KYW  K   AV AEA+EC+GG+GY+EE  + R  RESP 
Sbjct: 375 YDDGS--EAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPRLLRESPL 432

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493
           NS+  GSGN   LDVL  + +         S +      +  L  + K+++T L D   +
Sbjct: 433 NSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTELADLDGI 492

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 493 ----EARARRLVERMALILQGSLLLRFAPPEVADAFCASRL 529


>gi|257057805|ref|YP_003135637.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587677|gb|ACU98810.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 548

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/512 (37%), Positives = 284/512 (55%), Gaps = 8/512 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  +  +     +LL +L          ++  LG    S  AQE  R+AN N P LH
Sbjct: 9   NQVPPLVDYDVADDPALLESLRREGADWAEPKVRELGVLAGSEQAQEWGRLANENPPVLH 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP WH L+  ++  GLH + W +      R  AH  RAA+ Y+ +Q
Sbjct: 69  THDRVGRRIDEVEFHPYWHQLMATAVSHGLHAAPWRQD-----RPGAHVARAAKFYVWSQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +EAGH    S+T +++ AL     + KD+ P + +  YD   + P  K  +  G+ +TEK
Sbjct: 124 VEAGHTCPISMTYSAVPALRYNAELAKDYEPLLAAPHYDFGLRVPTTKRGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+   T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + CFL+PR+L DG
Sbjct: 184 QGGSDVRTNTTRAVPTEDGTYRLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLLPRVLPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N + +QRLK+K+GNRSNA+ E+E+    G+L+G+       + +M     LD  I S 
Sbjct: 244 TRNAIHFQRLKDKLGNRSNASAEVEYDGAVGWLIGEEGRGVRTIIEMVNNTRLDCVIGSA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384
           + MR     A+H+A  R   G  L+ QP+M   +AD+A++  AAT ++ RLA + D A  
Sbjct: 304 AAMRYGTVRAVHHATHRAAFGAPLVRQPLMTNVLADLAVEAEAATMVALRLAGATDRAVA 363

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA+ R    ++KYW CK +PA  AEA+EC+GG+GY+EE  + R +RESP  SI  
Sbjct: 364 GDHQEAAFRRFALSVSKYWVCKRSPAHAAEALECLGGNGYVEESGMPRLFRESPLLSIWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + K     +   + +E   G+  +  + IT +R  +    E +  AR
Sbjct: 424 GSGNVTALDTLRAMAKQPESVDAFLAEVESARGADPRLDEAITSVRRDLGDPDEIEFRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            L E++AL    + L R G   +AD F  +R 
Sbjct: 484 RLVERLALVLQGSLLVRHGDKSVADAFCASRL 515


>gi|90423755|ref|YP_532125.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90105769|gb|ABD87806.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 549

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/448 (42%), Positives = 269/448 (60%), Gaps = 3/448 (0%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P F  ++ ++ D  L  A+ A   +    EL   G    S    E  R+AN NTP+L
Sbjct: 13  NQSPPFEDVDLFALDRPLADAVAAYGGASAAAELSEFGREWGSAEMAERGRLANENTPKL 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D+VEFHPA+H ++  S+  GLH S WD   +P     A  IRAA+ Y+ A
Sbjct: 73  KSFDARGLRRDEVEFHPAYHEVMAASMRAGLHNSTWDAQGKPA-GGAAEVIRAAKFYMAA 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +E+GHL   ++T A++ AL   P + +   P I +R YD + K   QK  + +G+G+TE
Sbjct: 132 PVESGHLCPITMTRAAVGALSAQPDLLQQLMPVIATRSYDASFKPWQQKRGMTLGMGMTE 191

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ + +++  +  D  Y L GHKWF+S+PMSDAF++LAQ EG + CF  PR   D
Sbjct: 192 KQGGTDVRSNSTRAVRDGDA-YRLIGHKWFMSAPMSDAFLVLAQAEGGLTCFFTPRFAPD 250

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N L +QRLK+K+GNRSNA+ E+EF+  +   +G        + +M  L   D AI S
Sbjct: 251 GSVNALQFQRLKDKLGNRSNASSEVEFTGAYAQRVGGEGRGIRTIIEMVQLTRQDCAISS 310

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  MR  LA+A+H+AR R V    L DQP+M+  +AD+AL + A+ AL  RL  +FD A 
Sbjct: 311 VGFMRAGLAQALHHARHRSVFQKRLADQPLMQAVLADMALQVEASVALVMRLCAAFDRAG 370

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S    AA+ R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +AR YRE+P N+I  
Sbjct: 371 SDEVAAAWMRLLTPAVKYWICKSAPPFLYEAMECLGGNGYVEEGVLARLYREAPVNAIWE 430

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           GSGN M LDVL  L +  +L   +   L
Sbjct: 431 GSGNVMCLDVLRALSREPDLAAAVLQNL 458


>gi|297203226|ref|ZP_06920623.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|197711310|gb|EDY55344.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
          Length = 544

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 203/543 (37%), Positives = 295/543 (54%), Gaps = 26/543 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMANYN 80
           NQPP   G + Y +D  L   +     P++   VH EL  LG    S   QE    AN N
Sbjct: 10  NQPPPLTGYDVYGADRALKEAVERHLDPALLDEVHGELAALGRACGSAQVQEWGLQANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH +L + +  GL  + W RS         H +RAA  
Sbjct: 70  PPRLRTHDRYGHRVDEVEFHPAWHRVLGKGVSAGL-TAAWARS-------GGHVLRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            L  Q++AG     S+T A++ AL T P +  +W P++ S  YD   +    K     G+
Sbjct: 122 VLWTQVDAGSCCPLSMTHAAVPALRTDPDLAAEWEPRLTSMVYDRELRPAHLKAGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T+  + + DG  Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTSARPLPDGETYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + +M     LD
Sbjct: 242 RVLEDGTRNTFLLQRLKDKLGNRSNASAEVEFDRTWARRVGDEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLALESEAATTLALRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D      +E A  RI  P  KYW  K    + AEA EC+GG+GY+EE  + R  RESP 
Sbjct: 362 YD--NDDEQERALLRIAVPTAKYWITKRCTPLTAEAAECLGGNGYVEESGMPRLVRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493
           NS+  G+GN   LDVL +L++           +      +  L ++ K + T L D   +
Sbjct: 420 NSVWEGAGNIQALDVLRVLQREPQALNAYLLEIGRTRGADHRLDAATKSLFTELADLEGI 479

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
               +G AR LTE++AL    + L R    ++AD F  +R   +  ++   L    + A 
Sbjct: 480 ----EGRARHLTERLALVLQGSLLVRHAPAEVADAFCASRLGGDGGASFGTLPTTLDLAS 535

Query: 554 IID 556
           ++D
Sbjct: 536 VVD 538


>gi|192291895|ref|YP_001992500.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285644|gb|ACF02025.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 549

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 186/452 (41%), Positives = 267/452 (59%), Gaps = 3/452 (0%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P    ++   +D  LL A+  N  +  H ELE  G+        E  R+AN  TP+
Sbjct: 12  FNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGITEMAERGRLANEYTPK 71

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHP++H L+  S   GLH S WD   +P     +  +RAA+ Y+ 
Sbjct: 72  LKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPA-GNASEVVRAAKFYMA 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL + P +     P + +R+YDP+      K  ++IG+G+T
Sbjct: 131 AQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSFAPWTAKRGMSIGMGMT 190

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LAQ +  + CF +PR   
Sbjct: 191 EKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEGLSCFFMPRFQP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+L      +  M  L   D AI 
Sbjct: 250 DGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIRTIIQMVQLTRQDCAIA 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR SLA A+H+ R R V    L D  +M   +AD+AL + A+ AL  RL  +FDEA
Sbjct: 310 SAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVALVMRLCRAFDEA 369

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +ARHYRE+P N+I 
Sbjct: 370 PNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILARHYREAPVNAIW 429

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            GSGN M LDVL  + + ++   ++   L QD
Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 461


>gi|296270222|ref|YP_003652854.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093009|gb|ADG88961.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 534

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 192/513 (37%), Positives = 287/513 (55%), Gaps = 12/513 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ P  +G +  +  +LL  L         +E+  LG    +  AQE  R+AN   P L
Sbjct: 6   FNQVPPLVGHDVAADAALLEGLAREGAGWAAEEIHRLGVLAGTAEAQEWGRLANEYPPVL 65

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPAWH L+  ++ +GLH + W        R  AH  RAA+ ++ +
Sbjct: 66  RTHDRYGHRIDEVEFHPAWHQLMTVAVENGLHAAPWASD-----RPGAHVARAAKFFIWS 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    S+T +++ AL  +P +  +W P++ S  YD   + P +K  +  G+ +TE
Sbjct: 121 QVEAGHGCPISMTYSAVAALRHSPELRAEWEPRLTSCAYDFGLRPPAEKRGILAGMAMTE 180

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ + T++ + + DG Y L+GHKWF S+PM D F +LAQ  G + CFL+PR+L D
Sbjct: 181 KQGGSDVRSNTTKAEPLGDGTYALTGHKWFNSAPMCDIFFVLAQAPGGLSCFLLPRVLPD 240

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +   RLK+K+GNRSNA+ E+E+     +L+G+       + +M  +  LD  I S
Sbjct: 241 GTRNAMRLIRLKDKLGNRSNASAEVEYEGAIAYLVGEEGRGVRTIIEMVNMTRLDCVIGS 300

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +GMR  L +A+H+A+ R V G +LIDQP+M+  +AD+AL+  AAT L  RLA + D A 
Sbjct: 301 AAGMRFGLTQALHHAKHRRVFGKLLIDQPLMRAVLADLALESEAATTLMLRLAGATDRAI 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    EA + R      KYW  K  P   AEA+EC+GG+GY+E+  + R  RESP NS+ 
Sbjct: 361 RGDEAEALFRRAALAAAKYWVTKRGPVHAAEALECLGGNGYVEDSQMPRLLRESPVNSVW 420

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS--LCKEDKGLA 501
            GSGN   LDVL +L +     E  F+    ++  +G   IT   D +   L    +  A
Sbjct: 421 EGSGNVAALDVLRVLARQPEAVEAFFA----EVALAGDARITKAADRLRALLASATEADA 476

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R + E++ L   A+ L R     +AD F   R 
Sbjct: 477 RRIAEEMTLLLQASLLVRHAPAAVADAFCATRL 509


>gi|316932058|ref|YP_004107040.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315599772|gb|ADU42307.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 555

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 204/539 (37%), Positives = 296/539 (54%), Gaps = 13/539 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQP      N +S+D  LV  +A         ++   G  + +    EL  +AN + P+
Sbjct: 18  INQPVELADYNLFSADRPLVEAVAREGAEWAANDIADFGARIGTADYLELGALANRHLPE 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   G R D V FHPA+H L++ SI  GLH S W    +P  RK AH  RAAR YL 
Sbjct: 78  FDTHDRYGRRTDLVRFHPAYHRLMQTSIEQGLHSSPWT---DP--RKGAHVARAARFYLH 132

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EAGH    S+T A++  +   P V K W PKI +R YD  N     K  V IG+ +T
Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKQWLPKILARSYDARNVPADHKQGVTIGMAMT 192

Query: 204 EKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T++    G     G Y L GHK+F+S+PM DAF++LAQ  G + CFLVP
Sbjct: 193 EKQGGSDVRANTTRAILVGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N L   RLK K+GN SNA+ E E     G+++G        + +M  +   D
Sbjct: 253 RWKPDGSKNPLQVLRLKKKMGNASNASSETELRGALGWMIGPEGRGVATIIEMVAMTRFD 312

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR +L++AI + R+R   G +LIDQP+M+  +AD+A++  AA  L+ R+A +
Sbjct: 313 CMIGSSAIMRAALSQAIDHCRQRAAFGRLLIDQPIMQNVLADLAIETEAALGLTMRIARA 372

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++   EA   RI + I KYW CK  P + AEAMECIGGSG +E+  + RH+RESP 
Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRHFRESPV 431

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
           N+I  GSGN   LDVL  + +     E  F+ +EQ  G+  +  + I  L+D +    + 
Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRTPETLEAYFAEVEQAKGADVAFDRHIAALKDDMRDASDF 491

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR L +++A+   A+ L R   +++ + +  +R        +  L    N A IID
Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVTEAYCASRLAQRGAHHYGALPKGMNFAAIID 550


>gi|239946073|ref|ZP_04698010.1| putative oxidoreductase [Streptomyces roseosporus NRRL 15998]
 gi|239992544|ref|ZP_04713208.1| putative oxidoreductase [Streptomyces roseosporus NRRL 11379]
 gi|291449522|ref|ZP_06588912.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291352469|gb|EFE79373.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 552

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 203/513 (39%), Positives = 288/513 (56%), Gaps = 10/513 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G +A + D++L+  +    +  H  EL   G YV S  AQ  A  AN + P+L
Sbjct: 20  NQAPPLTGHDA-ADDAVLLEGVRREGAEWHIDELHRFGRYVGSEEAQHWADQANRHEPEL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH  RA    L  
Sbjct: 79  RTHDRFGHRIDEVEFHPAYHSLMDASVRAGLAGAAWADE-----RPGAHVARAGGFMLAT 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            LE GHL   S+T A + AL  +P + K + P + SR Y+P    P  K  +  G+G+TE
Sbjct: 134 MLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSTPAAKRGLLAGMGMTE 193

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFLVPR+L D
Sbjct: 194 KQGGTDVRANTTAAVEQADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFLVPRVLPD 253

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK K+GNRSNA+ E EF +T  +L+GD       + DM  +  LD  + S
Sbjct: 254 GSRNTFRIQRLKEKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 313

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +G+R +LA+A H+AR R V G  LIDQP+M+  +AD++L+  AAT L+ RLA + D A 
Sbjct: 314 AAGIRTALAQAAHHARHRSVFGVELIDQPLMRNVLADLSLESEAATTLALRLAGAADRAH 373

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R YRE+P N I 
Sbjct: 374 RGDAGERAFLRLATAIGKYWVCKRQPVAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 433

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LD+L  L +     E L + +    G+  +       LR  ++  ++ +  A
Sbjct: 434 EGSGNVNALDMLRALTREPESLEALSAEIGAAAGADARLDAAWRELRAELARPEDAQLRA 493

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R + E+ AL    + L R     +AD F  +R 
Sbjct: 494 RRVVERAALVLQGSLLVRHAPAAVADAFCASRL 526


>gi|332142200|ref|YP_004427938.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552222|gb|AEA98940.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii str. 'Deep ecotype']
          Length = 560

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 198/526 (37%), Positives = 289/526 (54%), Gaps = 17/526 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEY--VLSCTAQELARMANYNTP 82
           NQP +    N +  D LL   +    P   H   ELLG +  +      E   +AN N P
Sbjct: 14  NQPSILNSYNLWRDDKLLKTYVTQQLPEKQHWIAELLGCFGALAGNELMEHGELANKNKP 73

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  +   G R D V+FHP++HAL++ ++   +H   W        +  AH +RA  +Y+
Sbjct: 74  ELRTFDRYGRRIDHVDFHPSYHALMQSAMKHNVHNYSWQNE----QQDGAHTLRAVLMYM 129

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
             Q E+G     ++T A++ A+     +   W  K+ +  YDP +    QK  V IG+G+
Sbjct: 130 HYQAESGTSCPLTMTHAAVPAMRYGKSLPSYWLDKLINGVYDPRSLPASQKNGVTIGMGM 189

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+   T+   K  DG Y + GHK+F S+PM DA ++LAQ EG + CFL+PR+L
Sbjct: 190 TEKQGGSDVRRNTTTATKQRDGSYSIVGHKFFFSAPMCDAHLILAQAEGGLSCFLLPRIL 249

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           E+G  N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD  I
Sbjct: 250 ENGELNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVPVIIDMVSLTRLDCMI 309

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S + MR SL  A+H+   R   G  L++QP+M+  + D+ ++ AAATAL+ R+A + D 
Sbjct: 310 GSSALMRQSLVHALHHVSHRDAFGKTLVNQPLMQNVLTDLTIECAAATALTMRVAKAVDN 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A   S EAA AR+   I KYW CK  P  + EA EC+GG GY+EE  + R+YR++P NSI
Sbjct: 370 ASRNSYEAALARLATAIGKYWICKRTPMFVNEAQECLGGIGYVEENPMPRYYRQAPLNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGL 500
             GSGN   LDVL  L K  N+ E LF+ L+   G +    I +  L D +S  +  +  
Sbjct: 430 WEGSGNVQCLDVLRALAKEPNVKEALFNELKTQTGKNKHYDIHLSKLLDELSNTQNMETR 489

Query: 501 ARFLTEKIALASSAAALYRAGM--------NDIADVFLENRFLDNC 538
           +R+LTE++ALA  A  L             NDIA  F E+R  + C
Sbjct: 490 SRYLTEQMALALQACTLLATCTFLAKGNVHNDIAHTFCESRLGNAC 535


>gi|307328113|ref|ZP_07607293.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306886232|gb|EFN17238.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 548

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 198/516 (38%), Positives = 289/516 (56%), Gaps = 11/516 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           LNQ P  +G +     +LL AL  +       E+  LG    S   Q+ ARMA  ++P L
Sbjct: 8   LNQAPPLVGFSTADDPALLEALRRDGGGWGEPEVRDLGARAGSAEVQDWARMAEEHSPAL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+VE+HPA+H L+  ++  G H + W  +     R  AH +RAA+ Y  A
Sbjct: 68  HTHDRYGHRIDEVEYHPAYHQLMDVAVASGQHAAAWSET-----RPGAHLVRAAKFYAFA 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E GH    S+T A++ AL   P +   + P + +R YD   + P+ K  +  G+ +TE
Sbjct: 123 QAEPGHGCPISMTYAAVPALRAEPELAAVYEPLLAARTYDFGLRPPLAKRGLIAGMSMTE 182

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+Q      G Y L+GHKWF S+PMSD F+ LAQ E  + CFLVPR+L D
Sbjct: 183 KQGGSDVRANTTQAVPDGAGGYALTGHKWFTSAPMSDVFLTLAQTEEGLTCFLVPRVLPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N L   RLKNK+GNRSNA+ E+E+ +   + +G+       + +M  +  LD  I S
Sbjct: 243 GSRNPLRLMRLKNKLGNRSNASAEIEYESAMAWRVGEPGRGVRTIVEMVNVTRLDCVIGS 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +GMR  L +A+H+A  R   G  LIDQP+M+  +AD+A++  AAT L+ RLA + D A+
Sbjct: 303 AAGMRAGLRQALHHAGHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATALDRAE 362

Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  E EAA  R+   ++KYW CK      AEA+EC+GG+GY+EE  + R YRE+P  SI 
Sbjct: 363 AGDEGEAALRRLGLAVSKYWVCKRGSTHAAEALECLGGNGYVEESGMPRLYREAPLLSIW 422

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI-SLCKEDKG- 499
            GSGN   LDVL  L + +   E   + ++   G+  +    +  LR  +  L   ++  
Sbjct: 423 EGSGNIAALDVLRALSRESGALEAFLAEVDAAAGADARLDAAVDRLRGLLPQLADPERAQ 482

Query: 500 -LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +AR L E++ LA   + L R     +AD F  +R 
Sbjct: 483 LMARRLAEQMTLALQGSLLVRYSHPAVADAFCASRL 518


>gi|134099627|ref|YP_001105288.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005467|ref|ZP_06563440.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912250|emb|CAM02363.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 547

 Score =  348 bits (894), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 193/512 (37%), Positives = 289/512 (56%), Gaps = 8/512 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  +  +     +LL  L     +   +EL  LG    S   QE AR+A    P L 
Sbjct: 9   NQVPPLVDHDVAGDPALLEGLRREGAAWAEEELHALGTLAGSARVQEWARLAEQYPPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHP WH L+  ++ +GLH + W +      R  AH  RAA++Y+  Q
Sbjct: 69  THDRYGHRVDEVDFHPHWHDLMDVAVTNGLHAAPWRQE-----RPGAHVARAAKMYVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            + GHL   S+T A++ AL   P + + + P + +  YD   + P  K  +  G+ +TEK
Sbjct: 124 TDPGHLCPISMTYAAVPALRAAPELAELYEPLLAAPVYDFGLREPAGKRGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+   T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + CFL+PR+L DG
Sbjct: 184 QGGSDVRVNTTRAVPAGDGTYTLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLLPRVLPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N +  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       +  M  L  LD A+ S 
Sbjct: 244 TRNAIRLQRLKDKLGNRSNASSEIEYEDARGWLVGEEGRGVATIIRMVNLTRLDCAVASA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GMR  + +A+H+A  R   G  L+DQP+M   +AD+A++  AAT    RLA + D A +
Sbjct: 304 AGMRQGVVQAVHHATHRRAFGDRLVDQPLMTNVLADLAVEAEAATVAGMRLAGAVDRAAA 363

Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E ++ RI   +TKYW CK APA  AEA+EC+GG+GY+EE  + R YRESP  SI  
Sbjct: 364 GDDGEESFRRIGLAVTKYWVCKRAPAHAAEALECLGGNGYVEESGMPRLYRESPLASIWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + K     +  F+ +EQ  G+ G+  + I  +R  +   ++ +  AR
Sbjct: 424 GSGNVAALDALRAMAKQPESVQAYFTEVEQAAGADGRLDRAIASVRKELGDLEDAQYRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + E +A+    + L+R G   +AD F  +R 
Sbjct: 484 RVVELMAVVLQGSLLHRHGNPAVADAFCASRL 515


>gi|297155151|gb|ADI04863.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 548

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/516 (37%), Positives = 290/516 (56%), Gaps = 11/516 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           LNQ P  IG +     +LL AL  +  S   +E+  LG    S   Q+ ARMA  + P L
Sbjct: 8   LNQAPPLIGFSTADDPALLEALRRDGGSRGEQEVRELGALAGSAEVQDWARMAEEHPPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+VE+HPA+H L+  ++  G H + W  +     R  AH +RAA+ Y  A
Sbjct: 68  HTHDRYGHRVDEVEYHPAYHQLMAAAVASGQHAAAWSET-----RPGAHLVRAAKFYCFA 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E GH    S+T A++ AL   P +   + P + +R YD   + P+ K  +  G+ +TE
Sbjct: 123 QAEPGHGCPISMTYAAIPALRAEPELAAAYEPLLAARVYDFGLRPPLGKRGLIAGMSMTE 182

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++    +DG Y L+GHKWF S+PMSD F+ LAQ +  + CFLVPR+L D
Sbjct: 183 KQGGSDVRANTTRALPQADGSYLLTGHKWFTSAPMSDIFLTLAQTDEGLTCFLVPRVLPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLKNK+GNRSNA+ E+E+     + +G+       + +M  +  LD  I S
Sbjct: 243 GTLNAMRLQRLKNKLGNRSNASSEIEYDGAVAWRVGEPGRGVRTIVEMVNVTRLDCVIGS 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +GMR  L +A+H+   R   G  LIDQP+M+  +AD+A++  AAT L+ RLA + D  +
Sbjct: 303 AAGMRAGLRQALHHTEHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATALDRTQ 362

Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  E EAA  R+   ++KYW CK      AEA+EC+GG+GY+E+  + R YRE+P  SI 
Sbjct: 363 AGDESEAALRRLGLAVSKYWVCKRGATHAAEALECLGGNGYVEDSGMPRLYREAPLLSIW 422

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD---SISLCKEDK 498
            GSGN   LDVL  L + +   +   + ++   G+  +    +  LRD    ++  +  +
Sbjct: 423 EGSGNVAALDVLRALGRESGALDAFLAEVDTAAGADARLDAAVARLRDLLPQLADPQRAQ 482

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            LAR L E++ L    + L R     +AD F  +R 
Sbjct: 483 LLARRLAEQMTLVLQGSLLVRYSHPAVADAFCASRL 518


>gi|39933666|ref|NP_945942.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647512|emb|CAE26033.1| possible acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 555

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 204/539 (37%), Positives = 301/539 (55%), Gaps = 13/539 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQP      N +S+D  LV A+          ++   G  + +    EL  +AN + P+
Sbjct: 18  INQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALANRHLPE 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   G R D V FHPA+H L++ SI +GLH S W    +P  RK AH  RAAR YL 
Sbjct: 78  FDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWT---DP--RKGAHVARAARFYLH 132

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EAGH    S+T A++  +   P V K W PK+ +R YD  N    QK  + IG+ +T
Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGITIGMAMT 192

Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T++   I  G     Y L GHK+F+S+PM DAF++LAQ  G + CFLVP
Sbjct: 193 EKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N L   RLK K+GN SNA+ E E    FG+++G        + +M  +   D
Sbjct: 253 RWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMVAMTRFD 312

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR +L++AI + R+R   G +LI+QP+M+  +AD+AL+  AA AL+ R+A +
Sbjct: 313 CMIGSSAIMRAALSQAIDHCRQRAAFGRLLIEQPIMQNVLADLALETEAALALTMRIARA 372

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++   EA   RI + I KYW CK  P + AEAMECIGGSG +E+  + RH+RESP 
Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRHFRESPV 431

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
           N+I  GSGN   LDVL  + +     +  F+ +EQ  G+  +  + I  L+D +    + 
Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDMRDPSDF 491

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR L +++A+   A+ L R   +++A+ +  +R        +  L    N A IID
Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNFAAIID 550


>gi|316933652|ref|YP_004108634.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315601366|gb|ADU43901.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 549

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 184/452 (40%), Positives = 266/452 (58%), Gaps = 3/452 (0%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P    ++ + +D  LL A+  N  +  H ELE  G+   +    E  R+AN  TP+
Sbjct: 12  FNQSPPLPDLDLFGADRPLLEAVTFNQGANAHVELEAFGKAWGTTEMAERGRLANEYTPK 71

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHP++H L+  S   GLH S WD   +P     +  +RAA+ Y+ 
Sbjct: 72  LKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPAGHA-SEVVRAAKFYMA 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL   P +     P + +R+YD +      K  ++IG+G+T
Sbjct: 131 AQVETGHLCPVTMTRASVAALGAQPDLLAQVMPVLGTRQYDQSFAPWTAKRGMSIGMGMT 190

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LAQ +  + CF +PR   
Sbjct: 191 EKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEGLSCFFMPRFAP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M  L   D AI 
Sbjct: 250 DGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGEPGRGVRTIIQMVQLTRQDCAIA 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR SLA A+H+ R R V    L D  +M   +AD+AL + A+ AL  RL  +FDEA
Sbjct: 310 SAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVALVMRLCRAFDEA 369

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +ARHYRE+P N+I 
Sbjct: 370 PNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILARHYREAPVNAIW 429

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            GSGN M LDVL  + + ++   ++   L QD
Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 461


>gi|111220250|ref|YP_711044.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147782|emb|CAJ59442.1| acyl-CoA dehydrogenase (flavoprotein) , adaptive response
           (transcription activated by Ada) [Frankia alni ACN14a]
          Length = 580

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 201/536 (37%), Positives = 295/536 (55%), Gaps = 8/536 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP  +G +A +  +LL AL+          L  LG    +  A+  A  A+   P+L 
Sbjct: 26  NQPPPLVGHDASADPALLTALVREGAGWHTDALRRLGRLAGTEQARRWAEEADRFPPELR 85

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHP+WHALL  ++ +GL  + W    +P  R  AH  RAA + +   
Sbjct: 86  THDRYGNRVDEVDFHPSWHALLEVAVREGLTGAPW---RDP--RPGAHVARAANILVWGT 140

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GHL   S+T A + AL   P +   + P + SR YDP  + P  K  +  G+G+TEK
Sbjct: 141 VEQGHLCPVSMTYAVVPALRAAPDLAARYEPLLASRIYDPGLRPPEGKAGLLAGMGMTEK 200

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+     +DG Y L GHKWF S+PM+D F++LAQ  G + CF VPR+L DG
Sbjct: 201 QGGSDVRANTTTATPAADGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFWVPRVLPDG 260

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N    QRLK+K+GNRSNA+ E EF +T  +L+G        + +M  +  LD+++ S 
Sbjct: 261 SRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGAEGRGVRVIIEMVAMTRLDASLGSA 320

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384
           +GMR ++  A H+ R R   G  LID P+M+  +AD+AL+  AAT L  R+A + D  A+
Sbjct: 321 AGMRAAVTAAAHHVRHRRAFGTRLIDAPLMRNVLADLALESEAATTLVLRVAGAVDRAAR 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E A+ R+   + KYW CK AP V AEA+EC+GG+GY+EE  + R YRE+P N I  
Sbjct: 381 GDRDEQAFKRLATAVAKYWVCKRAPGVAAEALECLGGNGYVEESGMPRLYREAPLNGIWE 440

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  L++  +  + L   +E   G+  +  +    LR  +     D   AR
Sbjct: 441 GSGNVNALDVLRALDREPDGLDALSRQIEAARGADARLDRAWDRLRAQLPKAAADPFAAR 500

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            + E++AL    + L R     +AD F  +R   +       L    + A I+D +
Sbjct: 501 RVVERLALVMQGSLLVRHAPPAVADAFCASRLAGDGGLAFGTLPSGVDVAGILDRI 556


>gi|75676196|ref|YP_318617.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74421066|gb|ABA05265.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 546

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 187/461 (40%), Positives = 267/461 (57%), Gaps = 5/461 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75
           QP  +   LNQ P F  ++ ++ D  L   +A       ++ ++  G++  S       R
Sbjct: 3   QPFRTHEVLNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDDMKAFGKHWGSSAMAARGR 62

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN N P+   +   G R D+VEFHP++H L+  S H GLH S W     P     A  +
Sbjct: 63  LANENPPKPRLFDARGNRRDEVEFHPSYHELMAHSAHAGLHNSTWTADGRPAA-GAAEVV 121

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA+ Y+ AQ+E GHL   ++T AS+  L   P +  +  P I +R YDP       K  
Sbjct: 122 RAAKFYMAAQVETGHLCPITMTRASVATLAAQPDLLAETMPVIATRSYDPLFAPWRTKRG 181

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           + +G+G+TEK+GGTD+ A  +Q + + DG  Y ++GHKWF+S+PM DAF++LAQ EG + 
Sbjct: 182 MTLGMGMTEKQGGTDVRA--NQTRAVRDGDAYRVTGHKWFMSAPMCDAFLVLAQAEGGLT 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR   DGS N +  QRLK+K+GNRSNA+ E+EF   +   +G+       +  M  
Sbjct: 240 CFFMPRFRPDGSVNAIHLQRLKDKLGNRSNASAEVEFIEAYARRVGEEGKGIRAILQMVQ 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D AI S   MR  LA A+H+AR R V    L+DQP+M+  +AD+AL + A+ AL  
Sbjct: 300 LTRQDCAIASAGLMRSGLAHALHHARHRSVFRKRLVDQPLMQAVLADMALQVEASVALVM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +FDEA S  + A + R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +ARHY
Sbjct: 360 RLCRAFDEAPSDQKAAVWMRLLTPAVKYWICKSAPGFLYEAMECLGGNGYVEEGILARHY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           RE+P N+I  GSGN + LDVL  L +  +    +   L  D
Sbjct: 420 REAPVNAIWEGSGNVICLDVLRSLARDGDAAVAVLDDLAAD 460


>gi|192289022|ref|YP_001989627.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282771|gb|ACE99151.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 555

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/539 (37%), Positives = 302/539 (56%), Gaps = 13/539 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQP      N +S+D  LV A+          ++   G  + +    EL  +AN + P+
Sbjct: 18  INQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALANRHLPE 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   G R D V FHPA+H L++ SI +GLH S W    +P  RK AH  RAAR YL 
Sbjct: 78  FDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWT---DP--RKGAHVARAARFYLH 132

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EAGH    S+T A++  +   P V K W PK+ +R YD  N    QK  + IG+ +T
Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGITIGMAMT 192

Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T++   I  G     Y L GHK+F+S+PM DAF++LAQ  G + CFLVP
Sbjct: 193 EKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N L   RLK K+GN SNA+ E E    FG+++G        + +M  +   D
Sbjct: 253 RWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMVAMTRFD 312

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR +L++A+ + R+R   G +LI+QP+M+  +AD+A++  AA AL+ R+A +
Sbjct: 313 CMIGSSAIMRAALSQAMDHCRQRAAFGRLLIEQPIMQNVLADLAIETEAALALTMRIARA 372

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++   EA   RI + I KYW CK  P++ AEAMECIGGSG +E+  + RH+RESP 
Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPSLTAEAMECIGGSGVMEDGPMPRHFRESPV 431

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
           N+I  GSGN   LDVL  + +     +  F+ +EQ  G+  +  + I  L+D +    + 
Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDMRDASDF 491

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR L +++A+   A+ L R   +++A+ +  +R        +  L    N A IID
Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNFAAIID 550


>gi|298246748|ref|ZP_06970553.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297549407|gb|EFH83273.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 552

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 194/515 (37%), Positives = 282/515 (54%), Gaps = 11/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP  +  N ++ DS LVA I    +   +E L  LG Y+ S         AN   P+L
Sbjct: 16  NQPPPLVQYNPFTLDSALVAGIQREGAGWAEERLSELGRYLGSSEVITQGFEANTYPPEL 75

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+V FHPAWH L+  +++ G H   W        R  A   RAA  YL  
Sbjct: 76  HTHDRYGHRIDEVSFHPAWHQLMGAAVNWGTHALSWRED-----RPGAQVARAAGFYLFT 130

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    S+T A++  L   P + + W P + S EYD   +   +K  +  G+G+TE
Sbjct: 131 QVEAGHGCPISMTHAAIPVLRHQPELAETWLPGLLSLEYDFGLRPATEKRGLLCGMGMTE 190

Query: 205 KRGGTDIAAITSQG---QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           K+GG+D+ A T++     ++  G Y L+GHKWF S+PM D F++LAQ  G + CFL+PR+
Sbjct: 191 KQGGSDVRANTTRAVPAGELGAGTYLLTGHKWFCSAPMCDVFLVLAQAPGGLSCFLLPRV 250

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L DG+ N    QRLK+K+GNRSNA+ E EF  T  FL+G+       + +M     LD  
Sbjct: 251 LPDGTRNSFFIQRLKDKLGNRSNASSEAEFQQTVAFLVGEEGQGVRTIIEMVNYTRLDCI 310

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S + MR +L +A+H+ R R   G  L+DQ +M+  +AD++L++ AA  L+ RLA + D
Sbjct: 311 LGSTAMMRQALTQALHHTRHRQAFGRPLLDQSLMRNVLADLSLEVEAAITLALRLARACD 370

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A + + E    R+   + KYW  K  P  +AEA+EC+GG+GY+EE  + R YRE P NS
Sbjct: 371 QAPTSTHEEHIKRLGTALGKYWVTKRGPTCVAEALECLGGNGYVEESIMPRLYREMPLNS 430

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKG 499
           I  GSGN   LDVL  L K   + E  F+ +     ++      +  L+  +S     + 
Sbjct: 431 IWEGSGNVNCLDVLRALAKQPQVLESFFTEVAPARAANKHLSDAVQALQQELSHLDNIEW 490

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            ARFL E++AL    A L +     +AD F  +R 
Sbjct: 491 RARFLVERMALILQGALLVQHAPAPLADAFCTSRL 525


>gi|302555001|ref|ZP_07307343.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302472619|gb|EFL35712.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 544

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/539 (36%), Positives = 297/539 (55%), Gaps = 18/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + +S+D  L A +     P ++ +   EL  LG    S   QE   +AN N
Sbjct: 10  NQVPPLVGYDVFSADRALTAAVERHLDPVLLDEALGELTGLGRASGSAQVQEWGALANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHP+WH LL + +  GL  + W+R          H  RAA  
Sbjct: 70  PPRLRTHDRYGNRIDEVEFHPSWHRLLGKGVAAGL-TAAWNRP-------GGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG+    S+T A++ AL T P +  +W P++ S+ YD   +   QK     G+
Sbjct: 122 LVWTQVEAGNGCPLSMTHAAVPALRTDPELAAEWEPRLTSQIYDRELRPAGQKAGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T+  + +++ G Y L+GHKWF S+PMSD F++LAQ    + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTSARPLAEAGTYELTGHKWFCSAPMSDGFLVLAQAPDGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 242 RVLEDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+A++  AAT L+ RLA +
Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLAIESEAATTLALRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +DE     +E A  RI  P  KYW  K  PAV  EA EC+GG+GY+EE  + R  RESP 
Sbjct: 362 YDEGG--EQERALLRIAVPTAKYWVTKRCPAVAVEAAECLGGNGYVEESGLPRLVRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  G+GN   LDVL  L++     +     + Q  G+  +    I  L   ++  +  
Sbjct: 420 NSIWEGAGNVQALDVLRALQREPGALDAYLREVGQARGADHRLDGAIKNLLTELADLEGV 479

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +G AR L E++AL    + L R    ++AD F   R   +  +    L    + A +++
Sbjct: 480 EGRARRLAERLALVLQGSLLVRFAPPEVADAFCAARLGGDGGAAFGTLPHTLDLASVVE 538


>gi|297197847|ref|ZP_06915244.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
 gi|297146889|gb|EDY60541.2| oxidoreductase [Streptomyces sviceus ATCC 29083]
          Length = 551

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 201/513 (39%), Positives = 279/513 (54%), Gaps = 11/513 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP     +A     LL  L         + L  LG    S  AQE A  AN + P L 
Sbjct: 17  NQPPPLAPYDASDDPVLLEGLRREGADWAEEGLRRLGLRAGSAEAQEWADQANRHEPVLR 76

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 77  THDRYGNRVDEVDFHPSWHHLMRTAVAEGLAGTPWAED-----RTGAHVARTAGGLVWGH 131

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A++ AL   P + K +   +  REY+P  + P +K  +  G+G+TEK
Sbjct: 132 TDAGHGCPTSMTYAAIPALRKEPELAKVYESLLTGREYEPELRVPTRKRGLLAGMGMTEK 191

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 192 QGGSDVRTNTTTATPTAESGMYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 251

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  +MS
Sbjct: 252 GSRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 311

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            + MR +L EA H+AR R   G  LIDQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 312 ATLMRRTLVEAGHHARHRSAFGARLIDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 371

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E A+ RI   + KYW  K  PA  AEA+EC+GG+GY+E+  + RHYRE+P  SI 
Sbjct: 372 RGDAGEQAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIW 431

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LDVL  L +  +  + LF  L    G+  +    +  LRD ++   E    A
Sbjct: 432 EGSGNVNALDVLRALRRDPDTAQALFGELALAQGADARLDAAVARLRDQLATASEAG--A 489

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R L E +AL   A+ L R     +AD F   R 
Sbjct: 490 RRLVEYMALTLQASLLVRHAPPAVADAFCATRL 522


>gi|320007740|gb|ADW02590.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 562

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 197/539 (36%), Positives = 296/539 (54%), Gaps = 18/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + ++ D  L   +     P ++    +EL  LG    S  AQE    AN N
Sbjct: 27  NQVPPLVGYDVFAGDRALTEAVERHLAPGILREAQEELSTLGRAAGSAQAQEWGAQANEN 86

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V+FHPAWH LL  ++  GL    W R       +  H  RAA  
Sbjct: 87  PPKLRTHDRYGHRVDEVDFHPAWHRLLGHAVTAGL-TDAWGR-------EGGHVRRAAGF 138

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P + S  Y+   +   QK  V  G+
Sbjct: 139 LVWTQAEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHVYEEGLRPAPQKAGVLFGM 198

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GGTD+ + T++ + ++ DG Y L+GHKWF S+PMSD F++LAQ    + CFLVP
Sbjct: 199 GMTEKQGGTDVRSNTTRAEALAADGEYLLTGHKWFCSAPMSDGFLVLAQAADGLSCFLVP 258

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 259 RVLPDGARNPFALQRLKDKLGNRSNASGEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 318

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++A+AIH++  R   GG+LI++P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 319 CVVGSAALMRQAVAQAIHHSAHRSAFGGLLIEKPLMRNVLADLALESEAATTLALRLAAA 378

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D      +E A+ RI  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 379 YD--ADTEQERAFLRIAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAPL 436

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L++     +     + +  G+  +    I  L   ++  +  
Sbjct: 437 NSIWEGSGNVQALDVLRALQREPGALDAFLREVGKARGADHRLDAAIKDLLTELADLEAV 496

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR L E++AL    + L R    ++AD F  +R   +  S    L    + A +++
Sbjct: 497 EARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGSAFGTLPHSLDLATVVE 555


>gi|239945204|ref|ZP_04697141.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991666|ref|ZP_04712330.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 545

 Score =  342 bits (878), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 198/517 (38%), Positives = 286/517 (55%), Gaps = 18/517 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80
           NQ P  +G + +++D +L   +     P V+   LE LGE      S  AQE    AN +
Sbjct: 10  NQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEWGTQANAH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 70  PPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P + S  Y    + P +K  V  G+
Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREKAGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ + T++ + +S G  Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     LD
Sbjct: 242 RVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++A+A+H++  R V GG LID+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 302 CVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVLAMRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D       E A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 362 YD--ADTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPRLLREAPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L++           + +  G+  +    I  L   ++     
Sbjct: 420 NSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTELADLDGV 479

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +G AR L E+ AL    + L R    ++AD F  +R 
Sbjct: 480 EGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRL 516


>gi|29828665|ref|NP_823299.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29605769|dbj|BAC69834.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 549

 Score =  342 bits (878), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 200/544 (36%), Positives = 300/544 (55%), Gaps = 23/544 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + +++D  LV  +     P+++ +   EL  LG    S   QE   +AN N
Sbjct: 10  NQAPPLVGYDVFAADRALVEAVERHLDPALLDEARTELSGLGLSAGSAQVQEWGALANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHP+WH LL + +  GL  + W R          H  RAA  
Sbjct: 70  PPKLRTHDRWGNRIDEVEFHPSWHRLLGKGVSAGL-TAAWSR-------PGGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAG+    S+T A++ AL T P +  +W P++ S  YD   +   QK     G+
Sbjct: 122 VIWTQAEAGNGCPLSMTHAAVPALRTDPALAAEWEPRLTSMVYDQGMRPAAQKAGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVG 254
           G+TEK+GG+D+ A T+  + ++ DG Y L+GHKWF S+PMSD F++LAQ       G + 
Sbjct: 182 GMTEKQGGSDVRANTTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAASATDGGGLT 241

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + +M  
Sbjct: 242 CFLVPRVLEDGTRNVFRVQRLKDKLGNRSNASSEVEFDGTWARRVGDEGRGVRTIIEMVA 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  + S S MR ++A+AIH+   R   GG L+D+P+M+  +AD+AL+  AAT L+ 
Sbjct: 302 ATRLDCVLGSASLMRQAVAQAIHHCTYREAFGGKLVDKPLMRNVLADLALESEAATTLAL 361

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D+     +E A+ R+  P+ KYW  K    V AEA+EC+GG+GY+EE  +AR  
Sbjct: 362 RLAAAYDDGG--EQERAFLRLAVPVAKYWVTKRCTPVAAEALECLGGNGYVEEFGLARLL 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RESP NSI  G+GN   LDVL  L++           + +  G+  +    I  L   ++
Sbjct: 420 RESPLNSIWEGAGNVQALDVLRALQREPQALNAYLQEVGRARGADHRLDGAIKGLLTELA 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +  +G AR + E++AL    A L R    ++AD F  +R   +  +    L    + A
Sbjct: 480 DLEGIEGRARRVVERLALVLQGALLVRYAPPEVADAFCASRLGGDWGTAFGTLPHSLDLA 539

Query: 553 HIID 556
            +++
Sbjct: 540 TVVE 543


>gi|291448671|ref|ZP_06588061.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351618|gb|EFE78522.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 558

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 198/517 (38%), Positives = 286/517 (55%), Gaps = 18/517 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80
           NQ P  +G + +++D +L   +     P V+   LE LGE      S  AQE    AN +
Sbjct: 23  NQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEWGTQANAH 82

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 83  PPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 134

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P + S  Y    + P +K  V  G+
Sbjct: 135 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREKAGVLFGM 194

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ + T++ + +S G  Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 195 GMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 254

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     LD
Sbjct: 255 RVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATRLD 314

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++A+A+H++  R V GG LID+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 315 CVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVLAMRLAAA 374

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D       E A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 375 YD--ADTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPRLLREAPL 432

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L++           + +  G+  +    I  L   ++     
Sbjct: 433 NSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTELADLDGV 492

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +G AR L E+ AL    + L R    ++AD F  +R 
Sbjct: 493 EGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRL 529


>gi|85716407|ref|ZP_01047379.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85696764|gb|EAQ34650.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 546

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 182/446 (40%), Positives = 263/446 (58%), Gaps = 5/446 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELAR 75
           QP  +    NQ P F  ++ ++ D  L   +A       + E+E  G++  S       R
Sbjct: 3   QPFRTHEVFNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDEMEAFGKHWGSTAMAARGR 62

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN N P+L  +   G R D+VEFHPA+H L+  S    LH S W    +P     A  +
Sbjct: 63  LANENPPKLRLFDARGNRRDEVEFHPAYHELMANSARASLHNSTWTADGKPAA-GAAEVV 121

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA+ Y+ AQ+E GHL   ++T AS+  L   P +  +  P I +  YDP+      K  
Sbjct: 122 RAAKFYMAAQVETGHLCPITMTRASVATLAVQPDLLAEAMPVIATCSYDPSFAPWRTKRG 181

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           + +G+G+TE++GGTD+ A  +Q + + DG  Y ++GHKWF+S+PM DAF++LAQ +G + 
Sbjct: 182 MTLGMGMTERQGGTDVRA--NQTRAVRDGDAYRITGHKWFMSAPMCDAFLVLAQADGGLT 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR   DGS N +  QRLK+K+GNRSNA+ E++F   +   +G+       +  M  
Sbjct: 240 CFFMPRFRPDGSVNTIHLQRLKDKLGNRSNASSEVQFIEAYARRVGEEGKGIRTIIQMVQ 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D AI SV  MR  LA A+H+AR R V    L+DQP+M+  +AD+AL + A+ AL  
Sbjct: 300 LTRQDCAIASVGLMRSGLAHALHHARHRSVFQKRLVDQPLMQAVLADMALHVDASLALVM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +FDEA S  + A + R++ P  KYW CK +P  ++EAMEC+GG+GY+EE  + RHY
Sbjct: 360 RLCRAFDEASSDPKAATWMRLLTPAVKYWICKSSPGFLSEAMECLGGNGYVEENVLPRHY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           RE+P N+I  GSGN M LDVL  L +
Sbjct: 420 REAPVNAIWEGSGNVMCLDVLRALAR 445


>gi|295835819|ref|ZP_06822752.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295825722|gb|EFG64429.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 550

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 288/521 (55%), Gaps = 21/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + + +D  L   +     P+++     EL  LG    S  A+E    AN N
Sbjct: 10  NQPPPLVGYDVFGADRALSEAVDRHLDPALLPGARTELSELGRAAGSAQAREWGAQANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL  S W        R   H  RAA  
Sbjct: 70  PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
               Q EAGH    S+T A++ AL   P +   W P + SR YD   +    K     G+
Sbjct: 122 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAVWEPLLTSRVYDEGLRPAAAKAGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+TEK+GG+D+ A T++   +    DG++ L+GHKWF S+PMSD F++L Q  G + CFL
Sbjct: 182 GMTEKQGGSDVRANTTRAVPLDGDGDGVFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFL 241

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     
Sbjct: 242 VPRVLADGERNVFAIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S + MR ++A+AIH+AR R   GG L+D+P+M   +AD+AL+  AAT L+ RLA
Sbjct: 302 LDCALGSAALMRQAVAQAIHHARHREAFGGRLVDKPLMSNVLADLALESEAATTLALRLA 361

Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A++  E E A  R+  P+ KYW  K    V+ EA+EC+GG+GY+EE  + R  RE
Sbjct: 362 AACDAAEAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESGLPRLLRE 421

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           SP NS+  GSGN   LDVL  L++G    +   + L    G+   ++   +RD      +
Sbjct: 422 SPLNSLWEGSGNVQALDVLRALQRGPGALDAFLAELGLARGAD-HRLDAAVRDLFQELAD 480

Query: 497 DKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +G+   AR L E++AL    + L R    ++AD F  +R 
Sbjct: 481 LEGVEAGARRLVERMALVLQGSLLVRFAPPEVADAFCASRL 521


>gi|300786591|ref|YP_003766882.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299796105|gb|ADJ46480.1| putative acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 546

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 194/517 (37%), Positives = 280/517 (54%), Gaps = 14/517 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P     +     +LL  L          EL  LG    +  AQE  R+ N N P L 
Sbjct: 9   NQVPPLADHDVADDPALLAGLERAGAGWAAAELHELGRLAGTEQAQEWGRLVNENEPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP WH L+R +   GLH + W    +P  R+ AH  RAA+ Y+  Q
Sbjct: 69  THDRYGNRIDEVEFHPHWHDLMRVATGHGLHGTPWQ---DP--REGAHAARAAKFYVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +EAGH    S+T A++ AL   P +   + P + + EYD   + P  K  +  G+ +TEK
Sbjct: 124 VEAGHSCPISMTYAAVPALRANPELAARYEPLLAATEYDFGLRDPATKRGLLAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKI------SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +GG+D+ A T+           SDG Y L GHKWF S+PM D F+ LAQ    + CFL+P
Sbjct: 184 QGGSDVRANTTTATPSVSAVSRSDGSYTLVGHKWFTSAPMCDMFLTLAQAPNGLSCFLLP 243

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DGS NG+  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       + +M     LD
Sbjct: 244 RVLPDGSRNGILLQRLKDKLGNRSNASSEIEYDHAVGWLVGEEGRGVRTIIEMVNNTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S SGMR+    A+H+A  R   G  L+DQP+M   +AD+ L+  AAT ++ RLA +
Sbjct: 304 CTLGSASGMRLGAVRAVHHATHRRAFGKALVDQPLMANVLADLVLESEAATTVAMRLAAA 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  ++E A+ R+   ++KYW CK AP   AEA+EC GG+GY+EE  + R YRE+P 
Sbjct: 364 GDR-RGDAQEQAFRRLGLAVSKYWVCKRAPVHAAEALECFGGNGYVEESGMPRLYREAPL 422

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           +SI  GSGN   LD L  + +        F+ +E+  G   +    +  +R  ++     
Sbjct: 423 SSIWEGSGNVAALDALRAMGRQPESVAAFFAEVERAAGGDARLDDAVDRVRKELTDLDGI 482

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  AR L E +AL    + L R G   +AD F  +RF
Sbjct: 483 EYRARRLVEAMALVLQGSLLVRHGHPAVADAFCASRF 519


>gi|54026985|ref|YP_121227.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018493|dbj|BAD59863.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 540

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 195/539 (36%), Positives = 281/539 (52%), Gaps = 7/539 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ P  +  +   + +LL  L          E+  LG       AQE  R+AN   P L
Sbjct: 7   FNQVPNIVPFDVSRNPALLEGLHREGAGWAEAEVRELGALAGGERAQEWGRLANEYPPVL 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+VEFHP WH L+  ++  GLH + W        R  AH  RAA+ Y   
Sbjct: 67  HTHDRYGHRIDEVEFHPYWHELMTVAVGHGLHAAPWLDE-----RPGAHVARAAKFYTWG 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             +AGH+   S+T A++ AL   P +   + P + SR YD   + P  K  +  G+ +TE
Sbjct: 122 AADAGHMCPISMTYAAVPALRHNPELAAKYEPLLGSRVYDFGLREPTGKAGLIAGMSMTE 181

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+      DG Y + GHKWF S+PMSD F+ LAQ  G + CFL+PR+L D
Sbjct: 182 KQGGSDVRANTTTATPQPDGTYRIVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPRVLPD 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLK+K+GN+SNA+ E+E+ N  G+L+G        + +M  +  LD  I S
Sbjct: 242 GTRNPIRIQRLKDKLGNKSNASSEIEYENATGWLVGPEGHGVKTIIEMVNMTRLDCVIGS 301

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR +   A+H+AR R   G  LIDQP M+  +AD+ ++  AAT +  RLA + D A 
Sbjct: 302 ATNMRQATVHAVHHARHREAFGAKLIDQPAMRNVLADLVIESDAATTVMMRLAGATDRAA 361

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA   RI   +TKYW CK AP + AEA+EC+GG+GY EE  + R YRESP  SI  
Sbjct: 362 HDPAEANLRRIALAVTKYWVCKRAPMLTAEALECLGGNGYAEESGMPRLYRESPLMSIWE 421

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + +  +     F  + +  G + +    I  +   ++   + +  AR
Sbjct: 422 GSGNVAALDALRAMGRQPDTVAAYFDEVNKSRGDNPRLDDAIDRVGKELADLSDIEYRAR 481

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYLD 561
            + E +AL    A L R G   +AD F   R  D+       L    +   II+  +++
Sbjct: 482 RVVELMALVLQGAQLVRHGHRAVADAFCATRLGDDWGIAFGTLPTGVDTESIIERAFVE 540


>gi|297191205|ref|ZP_06908603.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150822|gb|EDY62427.2| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 549

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 200/544 (36%), Positives = 293/544 (53%), Gaps = 23/544 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + +++D  L   +     A       +EL  LG    S  AQE    A+ N
Sbjct: 10  NQPPPLVGYDVFTADRALAEAVDRHVAAEAGDAAREELSGLGRAAGSAEAQEWGAQADGN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V+FHPAWH LL R++  GL    W R          H  RAA  
Sbjct: 70  PPRLRTHDRYGHRIDEVDFHPAWHRLLDRAVSAGL-VDAWGR-------PGGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAGH    S+T AS+ AL T P +  +W P++ S  Y+   +   QK  V  G+
Sbjct: 122 LVWTQVEAGHGCPVSMTHASVPALRTDPVLAAEWEPRLTSTVYEEGLRPASQKRGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVG 254
           G+TEK+GG+D+   T++ + ++ DG Y L+GHKWF S+PMSD F++ AQ      EG + 
Sbjct: 182 GMTEKQGGSDVRTNTTRAEPLAQDGEYLLTGHKWFCSAPMSDGFLVSAQAAPATREGGLT 241

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+LEDGS N    QRLK+K+GNRSNA+ E+EF  T+   +G+       +  M  
Sbjct: 242 CFLVPRVLEDGSRNVFRIQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTITGMVA 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  + S + MR ++A+AIH+   R   GG+LID+P+M+  +AD+AL+  AAT L  
Sbjct: 302 ATRLDCVLGSAALMRQAVAQAIHHTAYRSAFGGLLIDKPLMRNVLADLALESEAATTLGM 361

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D      +E A+ R+  P  K+W  K    V+AEA EC+GG+GY+EE  + R  
Sbjct: 362 RLAAAYD--ADTEQERAFLRLAVPAAKFWVAKRCTPVVAEASECLGGNGYVEESGMPRLL 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RESP NSI  GSGN   LDVL  L++  +        + +  G+  +    I  L   ++
Sbjct: 420 RESPLNSIWEGSGNVQALDVLRALQREPSALNAFLQEVGRARGADHRLDGAIKGLLTELA 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
                +  AR L E++AL    + L R    +++D F  +R   +  S    L    +  
Sbjct: 480 DLDGIEARARRLVERMALVLQGSLLVRWAPPEVSDAFCASRLGGDGGSVFGTLPHTLDLT 539

Query: 553 HIID 556
            I++
Sbjct: 540 SIVE 543


>gi|282864765|ref|ZP_06273819.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560190|gb|EFB65738.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 543

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/539 (36%), Positives = 292/539 (54%), Gaps = 18/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + ++ D  L   +     PS++ +   ELE LG    S  AQ     AN N
Sbjct: 10  NQVPPLVGYDVFARDRALTEAVERHLEPSILPEARGELEALGLSAGSAQAQTWGAQANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 70  PPRLRTHDRYGHRLDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PGGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAGH    S+T A++ AL T P +  +W P + S  Y+   +   +K     G+
Sbjct: 122 LVWTQVEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHIYEEGLRPARRKAGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GGTD+ + T++ + +  DG Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGTDVRSNTTRAEPLGGDGEYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 242 RVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR ++ +AIH++  R   GG+L+D+P+M+  +AD+AL+  AAT L  RLA +
Sbjct: 302 CVVGSAALMRQAVTQAIHHSAHRSAFGGLLVDKPLMRNVLADLALESEAATTLGLRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D      +E A+ RI  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 362 YD--ADTEQERAFLRIAVPTAKYWVTKRCTAVVGEALECLGGNGYVEESGMPRLLREAPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L +     +     + +  G+  +    I  L   ++     
Sbjct: 420 NSIWEGSGNVQALDVLRALRREPQALDAFLREVGRARGADHRLDAAIKDLLTELADLDAV 479

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR L E++AL    + L R    ++AD F  +R   +  +    L    + A +++
Sbjct: 480 EARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGAAFGTLPHTLDLASVVE 538


>gi|197103313|ref|YP_002128691.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480589|gb|ACG80116.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 550

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 198/520 (38%), Positives = 290/520 (55%), Gaps = 22/520 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQPP   G N +SSD+ L+ A+          +L   GE + +    +   +AN + P+
Sbjct: 13  FNQPPPLEGYNLFSSDAALIEAVRREGADWALDDLTAYGEQLGTAETLQHGALANRDPPR 72

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LHA+   G R D VE HPA+HAL+   +  G+H S W    EP  +  AH  RAA LY+ 
Sbjct: 73  LHAFDRFGRRIDWVEHHPAYHALMGMQVAQGIHASPWS---EP--KPGAHVHRAAGLYMS 127

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q+EAG     S+T A+   L       +   PK++SR YDP ++   +K+   IG+G+T
Sbjct: 128 GQVEAGTSCPISMTYAAAPVLAQAGASVRALLPKLYSRRYDPAHRPVAEKSGALIGMGMT 187

Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T++   ++ G     Y + GHKWF+S+PM DAF++LAQ  G + CF VP
Sbjct: 188 EKQGGSDVRANTTRAAPLASGAPGEAYRIVGHKWFMSAPMCDAFLILAQAPGGLSCFFVP 247

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG  N L +QRLK+K+GNRSNA+ E+EF    G+L+GD       + +M     LD
Sbjct: 248 RWTPDGDLNALRFQRLKDKLGNRSNASAEVEFEGALGWLVGDEGRGVATILEMVGYTRLD 307

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           + + S    R +LA+A+H+AR R      L+DQP+M   +AD+AL++ AATAL+FRLA +
Sbjct: 308 NVLGSAGVQRQALAQALHHARHRTAFQKRLVDQPLMTNVLADLALEVEAATALAFRLARA 367

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD A+    E    R++ P  K+W CK  P + AEA+E +GG+GYIE+  + R YRE P 
Sbjct: 368 FD-AREDEPETLLRRLVTPAAKFWVCKRGPILAAEALEVLGGAGYIEDSGMPRLYRELPV 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493
            SI  GSGN + LDVL  L++     E + + L      ++ L +  + V++  R  +  
Sbjct: 427 YSIWEGSGNVVCLDVLRALQREPRCLEAVAAELAPLAGVDRRLDAQIEVVLSAPRQGLG- 485

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
               +G  R     + +   AA L R     I+D FL  R
Sbjct: 486 ----EGDLRRYCRDLVVTVQAALLARHAPPIISDAFLATR 521


>gi|256390950|ref|YP_003112514.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256357176|gb|ACU70673.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 550

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 200/535 (37%), Positives = 286/535 (53%), Gaps = 16/535 (2%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELA 74
           P+D    LNQ P   G NAY++D  LVA +       S    EL  LG    S  A+E  
Sbjct: 9   PADE--PLNQVPPLAGYNAYTADPSLVAAVHRLFGSGSATDTELTGLGALAGSFEAREWG 66

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+A  N P L  +   G R D+VEFHPAWH L+  ++  G+  + W      +     H 
Sbjct: 67  RLAEANHPILRTHDRYGRRIDEVEFHPAWHELMTVAVSHGIAAAPWLEDAGTL----RHT 122

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA++ +  Q E GHL   S+T A++ AL   P +  +W P++ S  YD   + P  K 
Sbjct: 123 ARAAKMLVWGQTEGGHLCPVSMTYAAVPALAADPMLAAEWTPRLASTSYDFGLRDPATKA 182

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
               G+G+TEK+GG+D+ A T++      SD  Y L GHKWF S+PM D F++LAQ  G 
Sbjct: 183 GCLAGMGMTEKQGGSDVRANTTKATPAAGSDREYTLIGHKWFTSAPMCDVFLVLAQAPGG 242

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF++PR+L DGS N    QRLK+K+GNR+NA+ E+EF NT  + LGD       + +M
Sbjct: 243 LTCFVIPRVLPDGSRNSFRLQRLKDKLGNRANASSEVEFHNTRAWRLGDEGRGVATIIEM 302

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  LD    S S MR +LAEA+H+ R R   G +L DQP+M+  +AD+AL+  AAT  
Sbjct: 303 VAMTRLDCVTGSASLMRAALAEAVHHTRHRMAFGKLLADQPLMRNVLADLALESEAATLT 362

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S  LA + D A S      + RI   + KYW  K      AEA+EC+GG+GY+EE  + R
Sbjct: 363 SLHLAAATD-AGSDPAARKFRRIGLAVAKYWVTKRCAPFAAEALECLGGNGYVEESGMPR 421

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
            YRE+P NSI  GSGN   LDVL  L +   +++   + +    G+  +       L+D 
Sbjct: 422 LYREAPLNSIWEGSGNVNALDVLRALGREDGVWDAFCAEVGTACGADARFDAAFKELKDE 481

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           ++    D+  AR   E++AL    + + R    +  D F+ +R   +   T   L
Sbjct: 482 VA--SVDEAGARRFVERMALLMQGSLMLRYAPTESGDAFVASRLAGDWGRTFGTL 534


>gi|297190427|ref|ZP_06907825.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720450|gb|EDY64358.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 579

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 201/543 (37%), Positives = 287/543 (52%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           +D+    NQPP  +G +      LL  L         ++L  +G    S      A  AN
Sbjct: 33  ADTHLVTNQPPPLVGHDVADDAVLLEGLRREGAGWYTEDLHRIGRLAGSEQVLRWAEEAN 92

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P L  +   G R D+V+FHP++HAL+  +I +GL  + W        R  AH  RAA
Sbjct: 93  RCEPVLRTHDRYGNRIDEVDFHPSYHALMDVAISEGLGGAPWADD-----RPGAHVARAA 147

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              + +  E GH    S+T A + AL + PR+   + P + SR YDP  +AP  K  +  
Sbjct: 148 GFMVWSSAEQGHGCPVSMTYAVVPALRSAPRLAALYEPLLTSRVYDPGMRAPAGKRGLLA 207

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+G+TEK+GGTD+ A T+   +  DG + L GHKWF S+PM+D F++LAQ  G + CFLV
Sbjct: 208 GMGMTEKQGGTDVRANTTTATEQPDGTWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLV 267

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG  N    QRLK+K+GNRSNA+ E EF +T G L+G        + DM  +  L
Sbjct: 268 PRVLPDGGRNTFRIQRLKDKLGNRSNASSEPEFDDTVGMLVGAEGQGVRTIIDMVTMTRL 327

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S SG+R +L +A H+ R R V G  LIDQP+M+  +AD++++  AAT L+ R+A 
Sbjct: 328 DCVLGSASGIRTALTQAAHHVRHRSVFGAKLIDQPLMRNVVADLSIESEAATTLALRVAG 387

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +  ++E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+
Sbjct: 388 AADRAQRGDAQERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREA 447

Query: 438 PANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           P N I  GSGN   LDVL  L  E G+               +        LR ++ L +
Sbjct: 448 PLNGIWEGSGNVNALDVLRALTREPGSLEAYAAEIEAAAGADARLDAAWRELRGALVLTE 507

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           +    AR L E++AL    + L R     +AD F  +R   +       L    + A  I
Sbjct: 508 DAALGARRLVERMALVLQGSLLVRHAPAAVADAFCASRLAGDRGLAFGTLPTGLDLAAAI 567

Query: 556 DSL 558
           D L
Sbjct: 568 DRL 570


>gi|21219626|ref|NP_625405.1| oxidoreductase [Streptomyces coelicolor A3(2)]
 gi|10803136|emb|CAC13064.1| putative oxidoreductase [Streptomyces coelicolor A3(2)]
          Length = 567

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 198/511 (38%), Positives = 273/511 (53%), Gaps = 7/511 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP     +A     LL  L           L  LG    S  AQ+   +AN + P L 
Sbjct: 33  NQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRHEPVLR 92

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 93  THDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWADG-----RPGAHVARTAGGLVWGH 147

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            EAGH    S+T A++ AL   P + + + P + SREY+P  + P  K  +  G+G+TEK
Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLTSREYEPGLRTPTDKRGLLAGMGMTEK 207

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+    +     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 208 QGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVPRVLPD 267

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  + S
Sbjct: 268 GTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMAS 327

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AATAL+ RLA + D A 
Sbjct: 328 ATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATALTLRLAGAADRAV 387

Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              E EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P  SI 
Sbjct: 388 RGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GSGN   LDVL  L +     + LF  L    G+  +      R    L +  +  AR 
Sbjct: 448 EGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASETGARR 507

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L E +AL   A+ L R     +AD F   R 
Sbjct: 508 LVELMALTLQASLLVRHAPPAVADAFCATRL 538


>gi|307543996|ref|YP_003896475.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307216020|emb|CBV41290.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 549

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/519 (37%), Positives = 289/519 (55%), Gaps = 17/519 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP     +    D  +  AL    P  V + L  LG  V S   + L   AN + P+L
Sbjct: 17  NQPPPPEDRDLLEDDLPMREALAREAPDWVAERLAPLGRDVGSEHVRALGEAANRHPPEL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D V++HPA+H L+  ++  G H   W         +  H+   A LYL+ 
Sbjct: 77  RLFDRYGRRLDAVDYHPAYHELMHLAMDHGWHAVAWQEEG-----RGGHQAHVAALYLLT 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T A+M AL  +P +H+ W+P +   +YDP      +KT++  G+ +TE
Sbjct: 132 QAEPGFCCPVTMTHAAMPALRHSPSLHERWSPGLLHWDYDPRALPAERKTALTFGMAMTE 191

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+Q   ++DG + L+GHKWF S+PMSDAF+ LAQ +  +GCFLVPR   D
Sbjct: 192 KQGGSDVRANTTQATPVADG-WRLNGHKWFCSAPMSDAFLTLAQTDDGLGCFLVPRFTPD 250

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N +  QRLK+K GNR+NA+ E+E+ +T+   LG+       +  M     LD+A   
Sbjct: 251 GERNAIELQRLKDKCGNRANASAEIEYRDTWAEPLGEPGRGVATILSMVQQTRLDAATAP 310

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EA 383
           V+ MR +L+EA  + R RH  G  L +QP+M+  +AD+AL++ A  AL+ R A +FD  A
Sbjct: 311 VAMMRQALSEAWRHVRARHAFGRCLAEQPLMRTLLADMALEVEAGVALTLRTARAFDGAA 370

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E A AR++  + KYW  K APA +AEAMEC+GG GY+EE  +AR YRE+P NSI 
Sbjct: 371 RGDAHETALARLLPALAKYWHNKRAPAFLAEAMECLGGIGYVEESPLARLYREAPVNSIW 430

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKED 497
            GSGN + LDVL +  +       L   L+   G+S       ++++T L       +  
Sbjct: 431 EGSGNVICLDVLRVFGRHPEALTALRQELDAARGASSALDTAMQELVTRLEAPPDTLERQ 490

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
              AR+LT+++A     A L R    +I + F  +RF+D
Sbjct: 491 ---ARWLTQRLAQCLQGALLLRHAPAEIGETFCRSRFID 526


>gi|326774735|ref|ZP_08234000.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655068|gb|EGE39914.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 552

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 207/523 (39%), Positives = 294/523 (56%), Gaps = 11/523 (2%)

Query: 17  QPSDSLFAL-NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELA 74
           +P+D    + NQPP   G +A + D++L+  I    +  H  EL   G YV S  AQ  A
Sbjct: 10  RPTDVTHEVTNQPPPLTGHDA-ADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWA 68

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN + P+L  +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH 
Sbjct: 69  DQANRHEPELRTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHV 123

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RA    L   LE GHL   S+T A + AL  +P + K + P + SR Y+P   AP  K 
Sbjct: 124 ARAGGFMLATMLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSAPTAKR 183

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +  G+G+TEK+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + 
Sbjct: 184 GLLAGMGMTEKQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLS 243

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  
Sbjct: 244 CFLVPRVLADGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVT 303

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD  + S +G+R +LA+A H+AR R V G  L+DQP+M+  +AD++L+  AAT L+ 
Sbjct: 304 MTRLDCVLGSAAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLAL 363

Query: 375 RLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RLA + D A +    E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R 
Sbjct: 364 RLAGAADRAHRGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRL 423

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE+P N I  GSGN   LD+L  L +     E   +  E   G+  +       LR  +
Sbjct: 424 YREAPLNGIWEGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRAEL 483

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  ++ +  AR + E+ AL    + L R     +AD F  +R 
Sbjct: 484 ARAQDAQLRARRVVERAALVLQGSLLVRHAPTAVADAFCASRL 526


>gi|256789299|ref|ZP_05527730.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289773187|ref|ZP_06532565.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289703386|gb|EFD70815.1| oxidoreductase [Streptomyces lividans TK24]
          Length = 567

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 197/511 (38%), Positives = 272/511 (53%), Gaps = 7/511 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP     +A     LL  L           L  LG    S  AQ+   +AN + P L 
Sbjct: 33  NQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRHEPVLR 92

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 93  THDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWADG-----RPGAHVARTAGGLVWGH 147

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            EAGH    S+T A++ AL   P + + + P + SREY+P  + P  K  +  G+G+TEK
Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLASREYEPGLRTPTDKRGLLAGMGMTEK 207

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+    +     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 208 QGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVPRVLPD 267

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  + S
Sbjct: 268 GTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMAS 327

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 328 ATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 387

Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              E EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P  SI 
Sbjct: 388 RGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GSGN   LDVL  L +     + LF  L    G+  +      R    L +  +  AR 
Sbjct: 448 EGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASETGARR 507

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L E +AL   A+ L R     +AD F   R 
Sbjct: 508 LVELMALTLQASLLVRHAPPAVADAFCATRL 538


>gi|158318169|ref|YP_001510677.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158113574|gb|ABW15771.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 572

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 181/436 (41%), Positives = 248/436 (56%), Gaps = 6/436 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP  +G +     +LL AL     +    +L  LG    +  AQ     AN   P L 
Sbjct: 14  NQPPPLVGHDVAEDPALLEALAREGAAGHADDLHRLGRLAGTAEAQRWGDEANRCPPVLR 73

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHPAWH LLR ++  GL  + W        R  AH  RAA   +  Q
Sbjct: 74  THDRYGNRVDEVDFHPAWHELLRVAVGAGLAGAPWAAD-----RPGAHVARAAGFLVWGQ 128

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GHL   S+T A   AL   P +   + P + S  YDP  + P+ K  +  G+G+TEK
Sbjct: 129 VEQGHLCPVSMTYAVTPALRAAPDLAAAYLPGLTSTVYDPGLRPPLSKRGLLAGMGMTEK 188

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A  +      DG Y L GHKWF S+PM+D F++LAQ  G + C LVPR+L DG
Sbjct: 189 QGGSDVRANETIAVPAGDGSYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPRVLPDG 248

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N    QRLK+K+GNRSNA+ E EF  T G L+G        + +M  L  LDSA+ + 
Sbjct: 249 GRNPFLIQRLKDKLGNRSNASAEPEFDRTLGHLVGTEGRGVRAIIEMVALTRLDSAVGAA 308

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           SGMR +L  A H+ R R   G +LID+P+M+  +AD+A++  AA AL  R+A + D A+ 
Sbjct: 309 SGMRAALVAAAHHTRHRSAFGSLLIDKPLMRNVLADLAVESEAAVALVMRVAGAVDRAEH 368

Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             E E A+ R+   + KYW CK  PA++AEA+EC+GG+GY+EE  + R YRE+P N I  
Sbjct: 369 GDEGERAFRRLATGLAKYWVCKRQPAMVAEALECLGGNGYVEESGLPRLYREAPLNGIWE 428

Query: 445 GSGNAMVLDVLNLLEK 460
           GSGN   LDV+  L +
Sbjct: 429 GSGNVNALDVVRALGR 444


>gi|329940263|ref|ZP_08289545.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329301089|gb|EGG44985.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 544

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/540 (35%), Positives = 295/540 (54%), Gaps = 20/540 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + +S+D  LV  +    +  H      EL  LG    S   QE   +AN N
Sbjct: 10  NQAPPLVGYDVFSADRALVEAVERHVAPEHLGEVTGELTGLGRSAGSAQVQEWGVLANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHP+WH LL + +  GL  + W R          H  RAA  
Sbjct: 70  PPTLRTHDRYGNRLDEVDFHPSWHRLLGKGVSAGL-TAAWSR-------PAGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG+    S+T A++ AL T P +  +W P++ S  YD   +   +K  V  G+
Sbjct: 122 VVWTQVEAGNGCPLSMTHAAVPALRTDPVLAAEWEPRLTSVVYDRGLRPAARKAGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T++ + +++ G Y L GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTEARPLAEEGTYALRGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 242 RVLEDGTRNVFLIQRLKDKLGNRSNASSEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + + + MR ++A+A+H+A  R   G +L+D+ +M+  +AD+AL+  AATAL  RLA +
Sbjct: 302 CVLGAAALMRQAVAQAVHHASHREAFGSLLVDKALMRNVLADLALESEAATALGLRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D+     +E A  R+  P  KYW  K    ++AEA EC+GG+GY+EE  + R  RESP 
Sbjct: 362 YDDGG--EQERALLRLAVPAAKYWVTKRCTPLVAEASECLGGNGYVEESGMPRLLRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKE 496
           NS+  G+GN   LDVL  L +     +     +    G+  +    V  +L D   L + 
Sbjct: 420 NSVWEGAGNVQALDVLRALRREPRAIDAFLREVGTTRGADHRLDGAVKNLLTDLADL-EG 478

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +G AR + E++AL    + L R    ++AD F  +R   +  +    L    + A ++D
Sbjct: 479 VEGRARRVVERMALVLQGSLLVRYAPPEVADAFCASRLGGDWGTAFGTLPHTLDLASVVD 538


>gi|182434223|ref|YP_001821942.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178462739|dbj|BAG17259.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 552

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 204/513 (39%), Positives = 289/513 (56%), Gaps = 10/513 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G +A + D++L+  I    +  H  EL   G YV S  AQ  A  AN + P+L
Sbjct: 20  NQPPPLTGHDA-ADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWADQANRHEPEL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH  RA    L  
Sbjct: 79  RTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHVARAGGFMLAT 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            LE GHL   S+T A + AL  +P + K + P + +R Y+P   AP  K  +  G+G+TE
Sbjct: 134 MLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTNRAYEPGLSAPTAKRGLLAGMGMTE 193

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFLVPR+L D
Sbjct: 194 KQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFLVPRVLAD 253

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  +  LD  + S
Sbjct: 254 GSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 313

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +G+R +LA+A H+AR R V G  L+DQP+M+  +AD++L+  AAT L+ RLA + D A 
Sbjct: 314 AAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLALRLAGAADRAH 373

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R YRE+P N I 
Sbjct: 374 RGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 433

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LD+L  L +     E   +  E   G+  +       LR  ++  ++ +  A
Sbjct: 434 EGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRTELARAEDAQLRA 493

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R + E+ AL    + L R     +AD F  +R 
Sbjct: 494 RRVVERAALVLQGSLLVRHAPTAVADAFCASRL 526


>gi|302527371|ref|ZP_07279713.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436266|gb|EFL08082.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 538

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/513 (38%), Positives = 281/513 (54%), Gaps = 11/513 (2%)

Query: 25  LNQ-PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQ PPL    +  +  +L  A+     S V  EL  LG    S   QE +R+ N N P 
Sbjct: 8   VNQVPPLE--HDVAADPALAEAVGRTEASWVVDELHELGRLAGSEQVQEWSRLVNENEPV 65

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHP WH L+  ++  GL  + W        R  AH  RAA+ Y+ 
Sbjct: 66  LRTHDRYGHRIDEVEFHPHWHDLMNVAVSHGLQAAPWRDE-----RPGAHAARAAKFYVW 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q EAGH    S+T A++ AL   P +  ++ P + S EYD   + P  K  +  G+ +T
Sbjct: 121 SQSEAGHTCPISMTYAAVPALRANPELAAEYEPLLASTEYDFGLREPGTKRGLIAGMSMT 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GG+D+ A T+  +   DG Y L GHKWF S+PMSD F+ LAQ  G + CFL+PR+L 
Sbjct: 181 EKQGGSDVRANTTSARPAGDGSYRLVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPRVLP 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N +  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       + +M     LD A+ 
Sbjct: 241 DGSRNPIRLQRLKDKLGNRSNASSEIEYDDAVGWLVGEEGRGVRTIIEMVNNTRLDCALG 300

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S SGMR+    A+H+A  RH  G  L+DQP+M   +AD+ L+  AA A S RLA + D  
Sbjct: 301 SSSGMRLGAVRAVHHATHRHAFGKALVDQPLMANVLADLVLEAEAAVAASMRLAAAGDRP 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E+ A+ R+   +TKYW CK AP   AEA+EC GG+GY+EE  + R YRE+P  SI 
Sbjct: 361 GDEQEQ-AFRRLGLAVTKYWVCKRAPMHAAEALECFGGNGYVEESGMPRLYREAPLMSIW 419

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LD L  + +        F+ +EQ  G   +    +  L+  +S   + +  A
Sbjct: 420 EGSGNVAALDALRAMGRQPESVAAFFAEVEQAAGGDARLDDAVDRLKKDLSDVDDLEFRA 479

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R + E +AL    + L R     +AD F   RF
Sbjct: 480 RRVVESMALVLQGSLLVRHAPRAVADAFCGTRF 512


>gi|304311840|ref|YP_003811438.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797573|emb|CBL45793.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 558

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 198/507 (39%), Positives = 277/507 (54%), Gaps = 13/507 (2%)

Query: 35  NAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           N Y+SD SL+ AL A         L   GE V          +AN N P  H +   G R
Sbjct: 29  NVYTSDPSLVEALRAYGVDPTDDGLTRFGELVGESEFIRHGFLANENKPVFHTHDRFGHR 88

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+V++HP++H L+  SI  GLH   W        R  AH  RAA  YLMAQ+EAGH   
Sbjct: 89  IDQVDYHPSYHVLMDTSIRHGLHSLPWTDQ-----RNNAHVYRAAHSYLMAQMEAGHGCP 143

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++T A    L   P +   W PKI +  YDP N     K  + IG+ +TEK+GG+D+ +
Sbjct: 144 ITMTFACAPTLKKQPDIAAQWLPKITAHHYDPRNIGYQHKQGLTIGMAMTEKQGGSDVRS 203

Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            T++   +  G    +Y L GHK+F+S+PM DAF+ LA  +  + CFL+PR  EDGS N 
Sbjct: 204 NTTRAFPVGQGGPGKLYQLVGHKFFMSAPMCDAFLALAYTDKGLSCFLMPRWNEDGSKNH 263

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +  Q+LK+K+GN SNA+ E+EF     +L+GD       + +M  L   D  + S S MR
Sbjct: 264 VHIQQLKDKMGNVSNASSEVEFRGAKAWLIGDEGRGVANILEMVALTRFDCLVGSASSMR 323

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
              A+A+ +   R   G +LI+QP+M+  +AD+A++  AA  L  R+AN+ DE +S  ++
Sbjct: 324 QCTAQAVFHCANRAAFGKLLIEQPLMRNVLADLAVESDAALHLWLRVANALDE-QSNPQQ 382

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA+ RI   I KYW CK +P    EAMECIGGSG +E   + R YRE+P N+I  GSGN 
Sbjct: 383 AAFLRIATAIGKYWVCKRSPGHAYEAMECIGGSGVMERCIMPRLYREAPINTIWEGSGNV 442

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEK 507
             LDV+  +EK     E LFS L Q  G   +   ++  ++  +S   E +  AR   E 
Sbjct: 443 QCLDVMRAMEKSPECVEALFSELAQSQGHDTQLDALVLSIKRHLSNTDEIEWRARQTVED 502

Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534
           +ALA  A+ L R G +  A+ FL  R 
Sbjct: 503 MALALQASLLVRHGHSATAEAFLATRL 529


>gi|120556487|ref|YP_960838.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326336|gb|ABM20651.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 563

 Score =  336 bits (861), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 194/538 (36%), Positives = 286/538 (53%), Gaps = 13/538 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQP      N Y  DS L  A++        ++L   G +       EL  +AN N P 
Sbjct: 24  INQPRPLENYNLYEQDSALREAVLREGAGHASEDLSRFGAWAGKADTIELGNLANANKPS 83

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   G R D+V FHPA+H L+R ++ +GLH S W         K AH  RAA+ YL 
Sbjct: 84  FRTHDRYGHRVDEVTFHPAYHELMRVALENGLHSSPWTNPG-----KGAHVARAAKYYLH 138

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EA H    ++T A++ ++   P + K WAPKI + EYD  N     KTSV IG+ +T
Sbjct: 139 SQVEAAHCCPVTMTFAAIPSIQNQPDLAKLWAPKILANEYDSRNVPDGDKTSVTIGMAMT 198

Query: 204 EKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T+     G++     Y L GHKWF+S+PM DAF++LAQ    + CFL+P
Sbjct: 199 EKQGGSDVRANTTVAYPTGREGPGQAYELVGHKWFVSAPMCDAFLVLAQTTNGLSCFLMP 258

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N    Q+LKNK+GN +NA+ E+E      +++G+       + +M  +   D
Sbjct: 259 RWRPDGSKNPWQVQQLKNKMGNVANASSEVEIRGALAWMVGEEGRGVRTIIEMVAMTRFD 318

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S +GMR ++A+A H+   R   G  L DQP+M+  +AD+ ++  AA A + R+A +
Sbjct: 319 CMIGSAAGMRQAVAQATHHCHNRSAFGATLSDQPLMQNVLADLIIENEAALAYTMRVARA 378

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++   E   AR+  P+ KYW CK  P    EAMECIGGSG +E+  + R +RESP 
Sbjct: 379 MDN-QNNEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLFRESPV 437

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           N+I  GSGN   LD L  L+K     +  F    +  G+  +  + +  L+   +   + 
Sbjct: 438 NAIWEGSGNVQCLDTLRALQKEPETLDAFFKETAEARGTDRRFDQYLAQLQHDFADISDF 497

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           +  AR L +++ALA   + L R G  D+AD F  +R        +  L    N A II
Sbjct: 498 QYRARNLVDRMALAMQGSLLLRFGDKDVADAFCASRLQSGGGMNYGNLPSGTNPAAII 555


>gi|182435181|ref|YP_001822900.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463697|dbj|BAG18217.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 555

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 195/539 (36%), Positives = 295/539 (54%), Gaps = 20/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80
           NQ P  +G + +++D  L   +     P V+   LE LGE      S   QE    AN +
Sbjct: 10  NQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEWGARANAH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHP+WH LL  ++  GL    W R          H  RAA  
Sbjct: 70  PPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++  L T P +  +W P + S  Y    + PM+K    +G+
Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEKAGALLGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+TEK+GGTD+ + T++ + +S  DG Y L+GHKWF S+PMSD F++LAQ  G + CFLV
Sbjct: 182 GMTEKQGGTDVRSNTTRAEALSGADG-YLLTGHKWFCSAPMSDGFLVLAQAAGGLSCFLV 240

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     L
Sbjct: 241 PRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWAHRVGEEGRGVRTIIEMVAATRL 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR ++++A+H++  R   GG+LID+P+M+  +AD+AL+  AAT L+ RLA 
Sbjct: 301 DCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVLAMRLAA 360

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++DE     EE A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P
Sbjct: 361 AYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAP 418

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
            NS+  GSGN   LDVL  L++     +     + +  G+  +    I  L   ++  + 
Sbjct: 419 LNSLWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTELADLEG 478

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            +  AR + E+IAL    + L R    +++D F  +R   +  S    L    + A ++
Sbjct: 479 VEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLDLASVV 537


>gi|326775818|ref|ZP_08235083.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326656151|gb|EGE40997.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 555

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 196/539 (36%), Positives = 295/539 (54%), Gaps = 20/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80
           NQ P  +G + +++D  L   +     P V+   LE LGE      S   QE    AN +
Sbjct: 10  NQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEWGARANAH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHP+WH LL  ++  GL    W R          H  RAA  
Sbjct: 70  PPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++  L T P +  +W P + S  Y    + PM+K    +G+
Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEKAGALLGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+TEK+GGTD+ + T++ + +S  DG Y L+GHKWF S+PMSD F++LAQ  G + CFLV
Sbjct: 182 GMTEKQGGTDVRSNTTRAEALSGADG-YLLTGHKWFCSAPMSDGFLVLAQAAGGLSCFLV 240

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     L
Sbjct: 241 PRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRL 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR ++++A+H++  R   GG+LID+P+M+  +AD+AL+  AAT L+ RLA 
Sbjct: 301 DCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVLAMRLAA 360

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++DE     EE A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R  RE+P
Sbjct: 361 AYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAP 418

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
            NSI  GSGN   LDVL  L++     +     + +  G+  +    I  L   ++  + 
Sbjct: 419 LNSIWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTELADLEG 478

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            +  AR + E+IAL    + L R    +++D F  +R   +  S    L    + A ++
Sbjct: 479 VEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLDLASVV 537


>gi|288918131|ref|ZP_06412488.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288350513|gb|EFC84733.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 563

 Score =  335 bits (860), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 200/525 (38%), Positives = 276/525 (52%), Gaps = 38/525 (7%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP  +G +      LL AL+        +EL  LG       AQ     AN + P L 
Sbjct: 14  NQPPPLVGHDVAEDVPLLAALVREGAGDQAEELHRLGRLAGGAEAQSWGDEANRHPPVLR 73

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHPAWH LL  ++  GL  S W        R  AH  RAA + +  Q
Sbjct: 74  THDRYGNRIDEVDFHPAWHELLTVAVRAGLAGSAWAAD-----RPGAHVARAAGILVWGQ 128

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GHL   S+T A++  + T P +   + P + S  YDP  + P  K  +  G+G+TEK
Sbjct: 129 VEHGHLCPVSMTYAAVPVVRTAPDLAAAYLPGLTSSVYDPGLRPPESKRGLLAGMGMTEK 188

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A  ++   +  G Y L GHKWF S+PM+D F++LAQ  G + C LVPR+L DG
Sbjct: 189 QGGSDVRANETRATPVGGGTYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPRVLPDG 248

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N    QRLK+K+GNRSNA+ E EF  T   L+G+       + DM  L  LDSAI + 
Sbjct: 249 SRNPFLIQRLKDKLGNRSNASAEPEFDGTLAHLVGEEGRGVRAIIDMVALTRLDSAIGTA 308

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           SGMR +L  A H+ R R   G +L+D+P+M+  +AD+AL+  AA  L  R+A + D A+ 
Sbjct: 309 SGMRAALVAAAHHVRHRSAFGSLLVDKPLMRNVLADLALESEAAVTLVMRVAGAVDRAEQ 368

Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             E E A+ R+   + KYW CK  PA++AEA+EC+GG+GY+E+  + R YRE+P N I  
Sbjct: 369 GDEGERAFLRLATGLAKYWLCKRQPAMVAEALECLGGNGYVEDSGLPRLYREAPLNGIWE 428

Query: 445 GSGNAMVLDVLNLLEK-----------------GTNLFEQLFSTLEQDLGSSGKKVITIL 487
           GSGN   LDVL  L +                 G    +  +  L  DL           
Sbjct: 429 GSGNVNALDVLRALGREPASLAAYAAEIDAAAGGNRHLDDAWRRLRHDL----------- 477

Query: 488 RDSISLCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVF 529
            D++    E   L   AR L E++AL    A L R     +AD F
Sbjct: 478 -DALLTADEPVELELVARRLVERMALLLQGALLVRHAPPAVADAF 521


>gi|56476533|ref|YP_158122.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312576|emb|CAI07221.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 542

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/515 (39%), Positives = 285/515 (55%), Gaps = 11/515 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P+    N + +D  L   +    +  H E L   GE + S   Q LA++A+ + P+
Sbjct: 8   FNQVPVLSDCNLFDTDIALREAVVRDGAGWHAEALHGQGEVLGSADTQRLAQLADRHVPE 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L AY   G R D V+FHPAW  LL     DG+H S W   FEP  R  AH  RAA  +L 
Sbjct: 68  LVAYDRCGRRVDDVDFHPAWSCLLALLYADGVHSSAW---FEP--RPGAHVARAASFFLH 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q EAG L   ++T AS+  L   P +    A K  SR+YD  +     K S  IG+G+T
Sbjct: 123 GQAEAGSLCPVTMTFASIPVLRREPALFGALADKFRSRDYDGRDVPLAGKRSAMIGMGMT 182

Query: 204 EKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           EK+GG+D+ A T++ + ++ G   + L GHKWF S P  DA ++LA     + CF VPR 
Sbjct: 183 EKQGGSDLRANTTEARPLAAGSRDHLLVGHKWFFSVPTCDAHLVLAHSPAGLSCFFVPRW 242

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L DGS N +  +RLK+K+GNRSNA+ E+EF + FG L+GD       + +M     LD  
Sbjct: 243 LPDGSRNAVRIRRLKDKLGNRSNASAEVEFEDAFGTLVGDEGRGIATIMEMAAQTRLDCV 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S + MR +L EAIH+AR R   G +L+ QP+M+  +A++AL+   AT L+ RLA +  
Sbjct: 303 LGSAALMRRALVEAIHHARHRSAFGNVLVAQPLMRNVLAELALESEVATMLAMRLAKAV- 361

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E+     E A+ RI+ P  K+W CK A A +AE ME  GG+GY+E+  +AR YRE+P NS
Sbjct: 362 ESDDDPLERAWRRIVTPAAKFWICKRAIAFVAECMEVWGGNGYVEDGPMARLYREAPVNS 421

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKG 499
           I  GSGN M LDVL    +  +  E L+  L Q L  +   V  +  L + +    E + 
Sbjct: 422 IWEGSGNVMCLDVLRAAAREPDGVEALWRELSQALAGNAALVHALGDLANRLRAPAEAEW 481

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR +  ++ L   A  L R    ++A  F+++RF
Sbjct: 482 HARHVAMQLVLLVQAGLLLRHAPGNVAAAFIDSRF 516


>gi|145596492|ref|YP_001160789.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145305829|gb|ABP56411.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 542

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 194/520 (37%), Positives = 284/520 (54%), Gaps = 11/520 (2%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           P+  +F  NQ P  +  +     +L   L          EL  LG    +  A E  R+A
Sbjct: 2   PTHEVF--NQVPPLVDYDVADDPALRSGLAREGAGWAAAELHDLGRLGGAAAAIEHGRLA 59

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P L ++   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RA
Sbjct: 60  NEYPPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWADD-----RPGAHVARA 114

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ Y   + +AGH    S+T A++ AL   P +   + P + +  YDP  +  + K  + 
Sbjct: 115 AKFYTW-RPDAGHGCPISMTYAAVPALRHAPELAARYEPLLTATTYDPGLRPALGKHGLL 173

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+ +TEK+GG+D+ A T+  Q  +DG Y L GHKWF S+PM D F+ L Q  G + CFL
Sbjct: 174 AGMSMTEKQGGSDVRANTTIAQPEADGSYRLVGHKWFTSAPMCDLFLTLGQAPGGLTCFL 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG+ N L   RLK K+GNRSNA+ E+E+ +   + +GD       + DM  L  
Sbjct: 234 VPRVLPDGTRNPLRLMRLKEKLGNRSNASAEIEYEHAVAWRVGDEGRGVRTIIDMVNLTR 293

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I + +GMR  +  A+H+AR R   G  L+DQP+M+  +AD+A++  AAT L  RLA
Sbjct: 294 LDCLIGAAAGMRQEVVTAVHHARHRRAFGRQLVDQPLMRTVLADLAVESEAATVLMLRLA 353

Query: 378 NSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D  A+  +++AA+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RE
Sbjct: 354 GATDRAARGDADQAAFRRLGVAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRE 413

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           SP NSI  GSGN  VLDVL  L +   +     + ++   G+  +    +  LR S++  
Sbjct: 414 SPLNSIWEGSGNVAVLDVLRALTRQPRVLAAFEAEVDAAAGADARLDAAVRRLRASLADP 473

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +    AR L E++AL    A L R G   +A+ F  +R 
Sbjct: 474 ADAPLRARHLVERLALVLQGALLVRHGHPAVAEAFCASRL 513


>gi|323527685|ref|YP_004229838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323384687|gb|ADX56778.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 568

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 203/552 (36%), Positives = 302/552 (54%), Gaps = 32/552 (5%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVL 66
           +R +  Q H+ +      NQ P     N +S+D+ L A +    +  H++  L  G  + 
Sbjct: 2   QRHSFGQTHEVT------NQVPPLADYNLFSTDAALSAAVERDGAAWHRDALLRHGAALT 55

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +     LA +AN +TP+L  + P GER D +EFHPAWHALL     +GLH   +    +P
Sbjct: 56  TPETLALAELANRHTPELVTHSPRGERIDALEFHPAWHALLALLRREGLHALPFS---DP 112

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R  A   R A  +L AQ+E+G L   ++T AS+  L   P++      K+++RE+DP 
Sbjct: 113 --RPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYAREHDPR 170

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242
           +     KTS  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA
Sbjct: 171 DLPLAHKTSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDA 230

Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            ++LA+    VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++G
Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           D       + +M     LD  I S + MR +L +AIH+AR R   G  L+DQP+M+  +A
Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLA 350

Query: 361 DIALDIAAATALSFRLANSFDE-----------AKSRSEEAAYARIMAPITKYWCCKMAP 409
           D+AL+  AAT L  RLA++F++           + +   E A+ RI+ P  KYW CK   
Sbjct: 351 DLALESEAATVLFMRLAHAFEQSADAAATSAATSSAALAERAWRRIVTPAAKYWVCKRTL 410

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
               EAME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF
Sbjct: 411 EFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALF 470

Query: 470 STLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
           +  + D  +       + + + +L    +  +G AR + ++I L + A  L +     +A
Sbjct: 471 AQWQADAAAHPALRAALGKLAATLHEPAEHREGSARRIAQQIVLIAQATLLVKHAPAAVA 530

Query: 527 DVFLENRFLDNC 538
           D F+  R  + C
Sbjct: 531 DPFIATRLAEGC 542


>gi|327482383|gb|AEA85693.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 548

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 205/528 (38%), Positives = 289/528 (54%), Gaps = 18/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G N Y  D  L      +        L++ G        Q    +AN N P  
Sbjct: 14  NQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQA-GFLANENRPVF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+R ++  G+    W    +P  +  A   RAA +YL  
Sbjct: 73  KSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWT---DP--QPGAQVARAALMYLHN 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q EAG     ++T AS+ AL   P + + W PKI +REYDP N    QK  V IG+ +TE
Sbjct: 128 QAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVTIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG+ N    QRLKNK+GN +NA+ E+E+     +++G+       + +M      D 
Sbjct: 248 HRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMVASTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S S MR +L +A+H+   R V G  L+DQP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALTLRMGRAQ 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   E+  +AR++  I KYW CK AP +IAEA EC+GG+GY+EE  + R YRE+P N
Sbjct: 368 DHRRDEHED-KFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           SI  GSGN   LDVL  L K   + E LF+ L    G +  KV I  L+ +    ++ + 
Sbjct: 427 SIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFGDTEDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
            AR LTE++A+A  A  L  AG   ++D F+ +R LD     H  +HG
Sbjct: 487 RARQLTEEVAVALQAKLLLEAGDAAVSDAFIASR-LDG----HGRVHG 529


>gi|159039885|ref|YP_001539138.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157918720|gb|ABW00148.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 542

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/520 (36%), Positives = 285/520 (54%), Gaps = 11/520 (2%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           P+  +F  NQ P  +  +     +LL  L          EL  LG    +  A E  R+A
Sbjct: 2   PTHEVF--NQVPPLVDYDMADDPALLSGLAREGAGWATAELHDLGRLGGATAAIEHGRLA 59

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P L ++   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RA
Sbjct: 60  NEHPPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWSDD-----RPGAHVARA 114

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ Y   + +AGH    S+T A++ AL   P +   + P + +  YDP  +  + K  + 
Sbjct: 115 AKFYTW-RPDAGHGCPISMTYAAVPALRHAPELAGRYEPLLTATTYDPGLRPALGKQGLL 173

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+ +TEK+GG+D+ A T+  +  +DG Y L GHKWF S+PM D F+ L Q  G + CFL
Sbjct: 174 AGMSMTEKQGGSDVRANTTTARPEADGSYRLVGHKWFTSAPMCDVFLTLGQAPGGLTCFL 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  
Sbjct: 234 VPRVLPDGTRNPVRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTR 293

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I + +GMR  +  A+H+A  R   G  L+DQP+M+  +AD+A++  AAT L  RLA
Sbjct: 294 LDCLIGAAAGMRQGVVTAVHHAVHRRAFGRQLVDQPLMRNVLADLAVESEAATVLMLRLA 353

Query: 378 NSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D  A+  + EAA+ R+   I KYW CK  P   AEA+EC+GG+GY+EE  + R +RE
Sbjct: 354 GATDRSARGDTGEAAFRRLGVAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRE 413

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           SP NSI  GSGN   LDVL  L + + +     + ++   G+  +    +  LR S++  
Sbjct: 414 SPLNSIWEGSGNVAALDVLRALTRDSQVLAAFEAEVDAAAGADPRLDAAVRRLRASLADP 473

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +  AR L E++AL      L R G   +A+ F  +R 
Sbjct: 474 ADAQLRARRLVEQLALVLQGMLLVRGGHPSVAEAFCASRL 513


>gi|71726097|gb|AAZ39220.1| putative acyl-CoA dehydrogenase [Janthinobacterium lividum]
          Length = 560

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 201/535 (37%), Positives = 290/535 (54%), Gaps = 27/535 (5%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           D+    NQ   F  +N ++ D  L+ AL+        +E++ LGE +       LAR AN
Sbjct: 5   DTHEVFNQATPFENVNLFACDPALIEALLREGGGAALQEIDALGEKLGRAETYALARQAN 64

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            +TP+L  +   G R D+V FHPAWH L+   +  G H S W           A   RAA
Sbjct: 65  IHTPELQQFDRAGRRVDEVLFHPAWHELMAILVGAGAHASPWASP-----GPGAQVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
              L+ Q+E G     ++T AS+ AL   +  P + + W PKI SREYDP +    QK  
Sbjct: 120 AYLLVGQVENGTQCPVTMTYASVPALRQALDLPHIAQRWLPKILSREYDPRSLPVEQKRG 179

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKI------------SDGIYCLSGHKWFLSSPMSDAF 243
             +G+G+TEK+GG+D+ + T++   +            + G + + GHKWF S+P  DA 
Sbjct: 180 ALVGMGMTEKQGGSDVRSNTTRAVPVPPAEAQALFGSEAGGAWRIVGHKWFFSAPQCDAH 239

Query: 244 IMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           ++LAQ  EG + CF +PR L DGS N +  QRLK+K+GNRSNA+ E+EF+N +G+L+G  
Sbjct: 240 LILAQADEGGLSCFFLPRYLPDGSRNAIRVQRLKDKLGNRSNASSEVEFTNAYGWLVGQP 299

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M     LD  + S   MR +L++A+H+AR+R V G  L +QP+M+  +AD+
Sbjct: 300 GRGIPTILEMASHTRLDCVLGSAGIMRAALSQALHHARQRAVFGKPLAEQPLMQNVLADL 359

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AATA + RLA  FDE K   ++A  AR++ P  KYW CK  P    EAME +GG+
Sbjct: 360 ALESEAATAFALRLARCFDE-KDDPQQAMLARVLTPAGKYWICKRGPGFGFEAMEVLGGT 418

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY+E+  +AR YRE P NSI  GSGN M LDVL    K +       +      G     
Sbjct: 419 GYVEDAPLARLYRELPVNSIWEGSGNVMCLDVLRAFGK-SPAARDALAAELALAGDDDAI 477

Query: 483 VITI---LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           ++     L   +   + D+  AR L+E+I LA   A L R     +A  FL++R 
Sbjct: 478 LVDYRARLLADLDGPQTDEFGARQLSERIVLAVQGALLLRHAPPFVAQAFLQSRL 532


>gi|333023668|ref|ZP_08451732.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332743520|gb|EGJ73961.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 541

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 280/518 (54%), Gaps = 17/518 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + + +D  L   +         S    EL  LG    S  AQE    AN N
Sbjct: 3   NQPPPLVGYDVFGADRALSEAVERHLHPALLSTARTELSELGRAAGSAQAQEWGAQANEN 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL  S W        R   H  RAA  
Sbjct: 63  PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
               Q EAGH    S+T A++ AL   P +  +W P + SR YD   +    K     G+
Sbjct: 115 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFGM 174

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T++   ++ DG + L+GHKWF S+PMSD F++L Q  G + CFLVP
Sbjct: 175 GMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFLVP 234

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     LD
Sbjct: 235 RVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEMVSATRLD 294

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S + MR ++A+AIH+A  R   GG L+ +P+M   +AD+AL+  AAT L+ RLA +
Sbjct: 295 CALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAAA 354

Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +D A +  E E A  R+  P+ KYW  K    V+ EA+EC+GG+GY+EE  + R  RESP
Sbjct: 355 YDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESGLPRLLRESP 414

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
            NS+  GSGN   LDVL  L++     +     L    G+  +    +  L   ++  + 
Sbjct: 415 LNSLWEGSGNVQALDVLRALQREPGALDAFLGELGAARGADHRLDAAVKHLFQELADLEG 474

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 475 IEARARRLVERMALVLQGSLLVRFAPPEVADAFCASRL 512


>gi|330467883|ref|YP_004405626.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810854|gb|AEB45026.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 542

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 197/519 (37%), Positives = 281/519 (54%), Gaps = 10/519 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  I  +     +LL  L          E+  LG    S  A E  R+AN   P L 
Sbjct: 8   NQVPPLIDHDTADDPALLEGLAREGAGWAVGEVRDLGRLAGSQPAIEHGRLANEYPPVLR 67

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA+ Y   +
Sbjct: 68  THDRYGHRIDEVEFHPSWHELMRTAVEHGLHAAPWADE-----RVGAHVARAAKFYTW-R 121

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A++ AL   P +  D  P + +R YD   + P+ K  +  G+ +TEK
Sbjct: 122 PDAGHGCPISMTYAAVPALRHAPDLAADHEPLLTTRAYDFGLRPPLTKRGLLAGMSMTEK 181

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A  +  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR+L DG
Sbjct: 182 QGGSDVRANATTARPQPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPDG 241

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N +   RLK+K+GNRSNA+ E+E+     + +GD       + DM  L  LD  I + 
Sbjct: 242 TRNPMRLMRLKDKLGNRSNASAEVEYEQAAAWRIGDEGRGVRTIIDMVNLTRLDCVIGAA 301

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384
           +GMR  +  A+H+A  R   G  LIDQP+M+  +AD+A++  AAT L  RLA + D  A+
Sbjct: 302 AGMRQGVITAVHHATHRRAFGRALIDQPLMRNVLADLAIESEAATILMMRLAGATDRAAR 361

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EAA+ RI   I KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP NSI  
Sbjct: 362 GDATEAAFKRIALAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIWE 421

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  L     +     + L+   G+  +    +  ++ +++   + +  AR
Sbjct: 422 GSGNVAALDVLRALAGQPEVLAAFRAELDAAAGADPRLDAAVRQVQAALADPADREVRAR 481

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHS 540
            L E++AL    A L R G   +AD F  +R   D+ H+
Sbjct: 482 RLVEQLALVLQGALLVRHGHPAVADAFCASRLAADHGHA 520


>gi|146284066|ref|YP_001174219.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572271|gb|ABP81377.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 619

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 204/528 (38%), Positives = 288/528 (54%), Gaps = 18/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G N Y  D  L      +        L++ G        Q    +AN N P  
Sbjct: 85  NQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQA-GFLANENRPVF 143

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+R ++  G+    W    +P  +  A   RAA +YL  
Sbjct: 144 KSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWT---DP--QPGAQVARAALMYLHN 198

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q EAG     ++T AS+ AL   P + + W PKI +REYDP N    QK  V IG+ +TE
Sbjct: 199 QAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVTIGMAMTE 258

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 259 KQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 318

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG+ N    QRLKNK+GN +NA+ E+E+     +++G+       + +M      D 
Sbjct: 319 HRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMVASTRFDC 378

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S S MR +L +A+H+   R V G  L+DQP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 379 MIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALTLRMGRAQ 438

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   E+  +AR++  I KYW CK AP +IAEA EC+GG+GY+EE  + R YRE+P N
Sbjct: 439 DHRRDEHED-KFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRLYREAPVN 497

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           SI  GSGN   LDVL  L K   + E LF+ L    G +  KV I  L+ +    ++ + 
Sbjct: 498 SIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFGDTEDIQY 557

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
            AR LTE++A+   A  L  AG   ++D F+ +R LD     H  +HG
Sbjct: 558 RARQLTEEVAVTLQAKLLLEAGDAAVSDAFIASR-LDG----HGRVHG 600


>gi|183981022|ref|YP_001849313.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183174348|gb|ACC39458.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 542

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ PL    N  +S  L+ ALI        +E+  LG    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGSAQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VEF PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P +   + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLASTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    SDG Y L+GHKWF S+PM D F++LAQ  G + CF++
Sbjct: 176 GMSMTEKQGGSDVRAGTTEATPNSDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATTVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA + RI    +KYW CK +    AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 356 ATDKAVRGDQTEALFRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEESGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--ITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L    G   ++   +  LR  +   +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHVEGLRRQLGDLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                AR + E I LA   + L R G   + + FL  R 
Sbjct: 476 TIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRI 514


>gi|302537622|ref|ZP_07289964.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446517|gb|EFL18333.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 551

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 202/528 (38%), Positives = 284/528 (53%), Gaps = 33/528 (6%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-----PSV---VHKELELLGEYVLSCTAQELARMA 77
           NQ P  +G   Y  D  L   +        P +   V +EL  LG    S  AQ   R A
Sbjct: 10  NQAPPLVGYEVYLGDRALTEGVERHLADAAPELRDEVREELTALGRAAGSAQAQRWGREA 69

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RA
Sbjct: 70  NENPPVLRTHDRYGNRIDEVEFHPAWHRLLGHAVGAGL-TDAWGR-------PAGHLRRA 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L +Q EAGH    S+T A++ AL   P +  +W P++ S  Y+   +   QK  V 
Sbjct: 122 AGFFLWSQAEAGHGCPVSMTHAAVPALRADPELAAEWEPRLTSHVYEEGLRPAGQKAGVL 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGR-- 252
            G+G+TEK+GG+D+ A T+    + + G Y L+GHKWF S+PMSD F++LAQ    GR  
Sbjct: 182 FGMGMTEKQGGSDVRANTTSAAPLDAAGEYVLTGHKWFCSAPMSDGFLVLAQAAPSGRNS 241

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GN+SNA+ E+EFS T+   +G+       + +M
Sbjct: 242 LTCFLVPRVLPDGTRNAFAIQRLKDKLGNKSNASGEIEFSGTWARRVGEEGRGVRTIIEM 301

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S S MR +L +A+H+A  R   G  LIDQP+M+  +AD+AL+  AAT L
Sbjct: 302 VAATRLDCVIGSASLMRQALTQAVHHAEHRSAFGAPLIDQPLMRNVLADLALESEAATVL 361

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D      +E A+ R+  P  KYW  K    ++AEA+EC+GG+GY+EE  + R
Sbjct: 362 TLRLAAAYDAGT--DQERAFLRLAVPAAKYWVTKRCTPMVAEALECLGGNGYVEESGLPR 419

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ------LFSTLEQDLGSSGKKVITI 486
             RESP NSI  GSGN   LDVL  L++             L    +  L ++ K ++T 
Sbjct: 420 LLRESPVNSIWEGSGNVQSLDVLRALQREPQALNAFLLEVGLARGADHRLDAAIKNLLTE 479

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L D   +    +  AR + E++AL    + L R    ++AD F  +R 
Sbjct: 480 LADLDGI----EARARRVVERMALVLQGSLLVRWAPPEVADAFCASRL 523


>gi|330504987|ref|YP_004381856.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919273|gb|AEB60104.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 549

 Score =  332 bits (852), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 200/526 (38%), Positives = 283/526 (53%), Gaps = 15/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  +  +F  NQ P   G N Y  D  L   +  +      E L   G        Q  
Sbjct: 5   LHAETHEVF--NQVPSLDGANLYRLDLPLQEWVRRYDGAWADERLSAYGALAGGALMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P   ++   G R D VEFHPA+H L+R ++  GL    W    +P  R  AH
Sbjct: 62  GFLANENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAVEHGLPSLPWT---DP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EA      ++T A++ A+   P V + W PKI + EYDP N    QK
Sbjct: 117 VARAGLTYLHSQAEAASGCPLTMTFAAVPAIRLQPNVAEQWLPKILATEYDPRNLPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV 249
           T V IG+ +TEK+GGTD+ A T++   I  G     Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 TGVTIGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+   F ++LG+       +
Sbjct: 237 DKGLSCFLLPRHRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S S MR +L +A H+   R V G +L+DQP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLVDQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL  R+  + D    + E+  +AR++  + KYW CK AP +I EA EC+GG+GY+EE  
Sbjct: 357 LALCMRMGRALDHQHDQQED-KFARLVTAVGKYWICKRAPEMIYEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +  K  I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLKAHIQRLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              +   + +  AR LTE +A+A  A  L  AG   ++D F+ +R 
Sbjct: 476 ADFADTADIQYRARQLTEDMAVALQAKLLLEAGNATVSDAFIASRL 521


>gi|167568357|ref|ZP_02361231.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 559

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 208/549 (37%), Positives = 303/549 (55%), Gaps = 20/549 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  LA +AN + P+L
Sbjct: 14  NQAPPLHDYNAFETDAALVDAVERYDASWHQTALARDGAALTTLDALALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL     +GLH   +        R  A   R A  +L A
Sbjct: 74  STHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFS-----APRPGAMVARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P + +    K++SRE+D  +    +K S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFETLRGKLYSREHDARDAPLPEKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +Q   +  G     Y L GHKWF S+P  DA ++LA+  G  G  CF V
Sbjct: 189 KQGGSDVRSNETQAYPLGAGGRGEAYRLVGHKWFFSAPQCDAHLVLARTAGHAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATAL  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+  +    LF+        S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFN 550
            E +   AR + ++IAL + A+ L R G   +A+ F+  RF D    T   +  L   F+
Sbjct: 489 PEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYGTLPATFD 548

Query: 551 AAHIIDSLY 559
            A +I+  +
Sbjct: 549 HAALIERAF 557


>gi|88810286|ref|ZP_01125543.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88791916|gb|EAR23026.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 551

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/536 (37%), Positives = 285/536 (53%), Gaps = 12/536 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP      A+S+D +L   ++   +  V + L  LG    S    E   +AN   P+L
Sbjct: 17  NQPPPLGDYQAFSTDRVLCEAVSREGAPWVSEYLRALGALTGSEQLMEQGFLANRQPPEL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P G R D+V +HPA+H L+  +I  G+H   WDR  E       H   AA LYL+ 
Sbjct: 77  VTFDPYGRRIDEVRYHPAYHELMGLAIRHGVHSIAWDRQGE-----GGHVAHAAALYLLT 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T A++ AL     V +DW P+I  REYDP      +K  V  G+ +TE
Sbjct: 132 QPEQGVCCPITMTHAAVPALRLESAVAQDWEPRIRVREYDPRCLPSSEKAGVTFGMAMTE 191

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++ Q +    Y L+GHKWF S+PMSDAF+ LAQ    + CFLVPR   D
Sbjct: 192 KQGGSDVRANTTRAQTLRGDQYTLTGHKWFCSAPMSDAFLSLAQTPAGLTCFLVPRWRPD 251

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N    QRLK+K+GNRSNA+ E+E+S+T+   +G+       + +M     LD+A   
Sbjct: 252 GRRNPFFIQRLKDKLGNRSNASAEIEYSDTWARRVGEEGRGVRTIIEMVQQTRLDAATAP 311

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  MR +  +A+H+ R R   G  LI QP+M+  +AD+AL++ A  AL  R+A +FD   
Sbjct: 312 VGMMRQAFVQALHHVRHRSAFGKPLIHQPLMRNLLADLALELEAGVALLLRIARTFDRGA 371

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E    R+   + KYW  K AP  I EAMEC+GG+GY+EE  + R YRE+P NSI  
Sbjct: 372 QDPHERLLGRVGTALAKYWTNKRAPEFIYEAMECLGGNGYVEESILPRLYREAPVNSIWE 431

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG--LAR 502
           GSGN + LDVL  +E+   +     + ++   G   +    I R    L   +     AR
Sbjct: 432 GSGNVICLDVLRAIERDPQIVPAFLTEVDSARGGHRRLDAAIERFKQELGYREAAELRAR 491

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            + E +AL   A+ L R     +AD F E+R       T  ML+G   A   +D++
Sbjct: 492 RIAELMALTLQASLLVRHAPAAVADAFCESRL----GGTGGMLYGTLAAGVGVDAI 543


>gi|254429704|ref|ZP_05043411.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195873|gb|EDX90832.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 564

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 194/547 (35%), Positives = 294/547 (53%), Gaps = 24/547 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ       NAY +D+ L   +A    S     L   G    S    E   +AN + PQ
Sbjct: 20  FNQARALEDYNAYDNDTALREAVARHGASWAEDALSAHGARTGSAEVIEWGFLANEHKPQ 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
             ++   G R D V++H ++H L+   +  G+H S W        +  AH  RAA+ YL 
Sbjct: 80  FFSHDRQGYRVDLVKYHESYHRLMALGLESGMHSSPWSNP-----KPGAHVARAAQSYLQ 134

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ++AGH    ++T AS+ ++  TP + K+W PKI +  YDP N    +K ++ IG+G+T
Sbjct: 135 AQVDAGHGCPLTMTFASVPSISLTPALAKEWLPKILNNAYDPRNVPHTEKQALTIGMGMT 194

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T+    I +      Y L GHKWF S+PM DAF++LAQ +G + CFLVP
Sbjct: 195 EKQGGSDVRANTTVATAIGNEGPGEAYELVGHKWFTSAPMCDAFLVLAQTQGGLSCFLVP 254

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N +  QRLKNK+GN SNA+ E+E     G+L+G+       + +M  +   D
Sbjct: 255 RWRPDGSKNPIQVQRLKNKMGNVSNASSEIELRGALGWLVGEEGRGVPAIIEMVAMTRFD 314

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S SG R ++A+A+++A  R   G  L+DQP+M+  +AD+ L++  + A++ R+  +
Sbjct: 315 CMIGSASGQRQAVAQAVNHAAGRAAFGKTLLDQPLMRNVLADLQLEVEGSLAIAMRMGEA 374

Query: 380 FDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            D++    S S E+   R+  P  KYW CK  P    EAMEC+GG+G  E+  +AR YRE
Sbjct: 375 LDQSTLDPSNSHESLLLRLGLPAGKYWICKRTPFHAYEAMECLGGNGVTEDFIMARLYRE 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N+I  GSGN   LD+L  L K   + +  F+ L +  GS  +  K +  L+   S  
Sbjct: 435 APINAIWEGSGNVQALDMLRALGKTPAVLDTWFAELAKTQGSDARLDKAVDTLKREFSDM 494

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
            E +  AR + ++++L   A+ L  AG   +A+ F+ +R  +         HG  N   +
Sbjct: 495 DEAEYRARDIVDRVSLTMQASQLVAAGNTAVAEAFIASRLGE---------HGDRNYGTL 545

Query: 555 IDSLYLD 561
              L LD
Sbjct: 546 PKGLDLD 552


>gi|77461164|ref|YP_350671.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385167|gb|ABA76680.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 549

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 199/528 (37%), Positives = 284/528 (53%), Gaps = 17/528 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G  +      E 
Sbjct: 3   LHQFAETHEVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAESRIDAYGA-LAGGPLMEA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P   ++   G R D VEFHPA+H L+R +I  GL    W        +  AH
Sbjct: 62  GFLANQNKPVFASHDRYGHRIDLVEFHPAYHELMRTAIEHGLTSLPWAHP-----QDGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T AS+ A+   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMSYLHSQAEAGSGCPLTMTFASVPAMRLQPNLAEHWLPKILATEYDPRNVGMAHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   D + N    QRLKNK+GN+SNA+ E+EF     +++G+       +
Sbjct: 237 DKGLSCFLLPRHRPDDTRNQFYIQRLKNKLGNQSNASSEVEFRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S S MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + D    R  EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGKALDHLDDR-HEAQFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + R YRE+P NS   GSGN   LDVL  L K   + + LFS L    G   K++   ++ 
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDVLFSELGD--GHGDKRLAAHIQQ 473

Query: 490 SISLCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  K+   +   AR LTE IAL   A  L  AG + ++D F+ +R 
Sbjct: 474 LQAQFKDTSDIQYRARQLTEDIALGLQAKLLLEAGNSAVSDAFIASRL 521


>gi|290956476|ref|YP_003487658.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260646002|emb|CBG69093.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 532

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 198/532 (37%), Positives = 297/532 (55%), Gaps = 19/532 (3%)

Query: 35  NAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           + +++D +L   +A    P V     +EL   G    S   QE  R+AN N P+L AY  
Sbjct: 4   DVFAADKVLDEAVARHLAPEVRDEAREELSGFGRTSGSAQVQEWGRLANENPPKLRAYDR 63

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+VEFHP+WH LL + +  GL  + W        R   H  RAA   +  Q+EAG
Sbjct: 64  YGNRVDEVEFHPSWHRLLGKGVSAGL-TAAW-------TRPGGHVRRAAAFVVWTQVEAG 115

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +    S+T A++ AL T P +  +W P++ S  YD   +   QK     G+G+TEK+GG+
Sbjct: 116 NGCPLSMTHAAVPALRTDPALAAEWEPRLTSLLYDRDMRPAAQKAGALFGMGMTEKQGGS 175

Query: 210 DIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ A  +  + ++ DG Y L+GHKWF S+PMSD F++LAQ  G + CFLVPR+L DGS N
Sbjct: 176 DVRANATAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVPRVLADGSRN 235

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
               QRLK K+GNRSNA+ E+EF  T+   +GD       +  M     LD A+ + S M
Sbjct: 236 VFRIQRLKEKLGNRSNASAEVEFDGTWARRVGDEGRGVRTIIGMVAATRLDCALGAASLM 295

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R ++A+A+H+   R   GG LID+P+M+  +AD+AL+  AAT L+ R+A ++D A++ +E
Sbjct: 296 RQAVAQAVHHCTYREAFGGPLIDKPLMRNVLADLALESEAATVLAMRVAAAYDAAEAGAE 355

Query: 389 -EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E A+ R+  P+ KYW  K    ++AEA EC+GG+GY+EE  + R  RESP NS+  G+G
Sbjct: 356 NERAFLRLAVPVAKYWVTKRCTPLVAEAAECLGGNGYVEESGMPRLLRESPLNSVWEGAG 415

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---ARFL 504
           N   LDVL  L++     +     +    G+   ++   ++D ++   + +G+   AR L
Sbjct: 416 NVQALDVLRALQREPGALDACLREVGAARGAD-HRLDGAIKDLLTELADLEGVEARARRL 474

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            E++AL    A L R     +AD F  +R   +  S    L    + A I++
Sbjct: 475 VERLALVLQGALLVRYAPPAVADAFCASRLGGDRGSAFGTLPHTLDLASIVE 526


>gi|239928164|ref|ZP_04685117.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291436494|ref|ZP_06575884.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291339389|gb|EFE66345.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 549

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 196/517 (37%), Positives = 278/517 (53%), Gaps = 18/517 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80
           NQ P  +  + + +D  L   +     P V  +   EL  LG    S   QE    A+ +
Sbjct: 10  NQAPPLVQYDVFGADRALAEAVGRHLGPEVRDEALAELSGLGRTAGSAQVQEWGVQADEH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V+FHPAWH LL + +  GL  + W R          H  RAA  
Sbjct: 70  PPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGL-TAAWGRP-------GGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG     S+T A++ AL T P +  +W P + S  YD T +    K  V  G+
Sbjct: 122 LMWTQVEAGTCCPLSMTHAAVPALRTDPALATEWEPLLTSVIYDRTLRPAHLKPGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T+  + ++ DG Y L+GHKWF S+PMSDAF++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTTARPLAEDGAYELTGHKWFCSAPMSDAFLVLAQAPGGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       V  M     LD
Sbjct: 242 RVLADGTRNVFLLQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTVIGMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AATAL  RLA +
Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTYREAFGGKLVDKPLMRNVLADLALESEAATALGLRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D+     +E A  RI  P  KYW  K  P V  EA EC+GG+GY+EE  + R  RESP 
Sbjct: 362 YDDGG--EQERALLRIAVPAAKYWVTKRCPPVAVEAAECLGGNGYVEESGLPRLVRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  G+GN   LDVL  L +     +     + Q  G+  +    I  L   ++  +  
Sbjct: 420 NSIWEGAGNVQALDVLRALRREPAALDAYLREVGQARGADHRLDGAIKDLLTELADLEGV 479

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +G AR L E++AL    + L R     +AD F   R 
Sbjct: 480 EGRARRLVERLALVLQGSLLVRFAPPQVADAFCAARL 516


>gi|157147847|ref|YP_001455166.1| isovaleryl CoA dehydrogenase [Citrobacter koseri ATCC BAA-895]
 gi|157085052|gb|ABV14730.1| hypothetical protein CKO_03651 [Citrobacter koseri ATCC BAA-895]
          Length = 550

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 193/521 (37%), Positives = 288/521 (55%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQ 71
           N +H  + ++F  NQP      N + SD  L   +A   +    +L   +G+ + +  + 
Sbjct: 9   NTMHWQTHTVF--NQPAPLNNSNLFLSDGALCEAVAREGAGWDSDLLASIGQQLGTAESL 66

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN   P+L  Y P G+R D V FHPAWH L++    + +H   W+ +     R+ 
Sbjct: 67  ELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEN----ARQG 122

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P    DW   + S  YD      
Sbjct: 123 AFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPSPFHDWLTPLRSDRYDSHLLPG 182

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG + L GHKWF S P SDA ++LAQ +
Sbjct: 183 GQKRGLLIGMGMTEKQGGSDVLSNTTRAERLDDGAWRLVGHKWFFSVPQSDAHLVLAQTK 242

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  NG+  +RLK+K+GNRSNA+ E+EF +  G+LLG+       + 
Sbjct: 243 GGLSCFFVPRFLPDGQRNGVRLERLKDKLGNRSNASCEVEFQDAVGWLLGEEGEGIRHIL 302

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S S MR + + AI++A +R V G  LIDQP+M++ ++ +AL +   T
Sbjct: 303 KMGGMTRFDCALGSHSMMRRAFSVAIYHAHQRQVFGKSLIDQPMMRQVLSRMALQLEGQT 362

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  +   +EA  AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 363 ALLFRLARAWDR-RGDPKEALRARLFTPAAKFAICKSGIPFVAEAMEVLGGVGYCEESEL 421

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K T ++E L     +  G        + +  
Sbjct: 422 PRLYREMPVNSIWEGSGNVMCLDVLRVLSKQTGVYELLNEAFAEVKGQDRHYDRAVRQLQ 481

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K D+   R +T+++ L    A + R     +A  + +
Sbjct: 482 QRLRKPDEAQGREITQQLFLLGCGAQMLRYASPPLAQAWCQ 522


>gi|167561138|ref|ZP_02354054.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 559

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 208/549 (37%), Positives = 304/549 (55%), Gaps = 20/549 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  LA +AN + P+L
Sbjct: 14  NQAPPLHDYNAFETDAALVGAVERYDASWHQTALARDGAALTTLDALALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL     +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  STHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFS---DP--RPGAMVARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P + +    K++SRE+D  +    +K S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPSLFETLREKLYSREHDARDAPLPEKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +Q   +  G     Y L GHKWF S+P  DA ++LA+  G  G   F V
Sbjct: 189 KQGGSDVRSNETQAYPLGAGGRGESYRLVGHKWFFSAPQCDAHLVLARTAGHAGISSFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATAL  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+  +    LF+        S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFN 550
            E +   AR + ++IAL + A+ L R G   +A+ F+  RF D    T   +  L   F+
Sbjct: 489 PEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYGTLPATFD 548

Query: 551 AAHIIDSLY 559
            A +I+  +
Sbjct: 549 HAALIERAF 557


>gi|302867552|ref|YP_003836189.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570411|gb|ADL46613.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 542

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 195/535 (36%), Positives = 286/535 (53%), Gaps = 9/535 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           +NQ P  +G +     +L   +           L  LG       A E  R+AN + P L
Sbjct: 7   VNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEHPPVL 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA  YL  
Sbjct: 67  RTHDRYGNRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGFYLW- 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           + +AGH    S+T A++ AL  +P +   + P + +REYD   + P  K  +  G+ +TE
Sbjct: 121 RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYDFGLRPPQTKRGLLAGMSMTE 180

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR+L D
Sbjct: 181 KQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPD 240

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD  I +
Sbjct: 241 GTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDCVIGA 300

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383
            +GMR  +  A+H+A  R   G  L DQP+M+  +AD+A++  AAT L  RLA + D  A
Sbjct: 301 AAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGATDRSA 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    E A+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP NSI 
Sbjct: 361 RGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIW 420

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LDVL  L +   +     + +    G+  +    +  +RD ++   + +  A
Sbjct: 421 EGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADVRLDAAVRRVRDELADHTDLELRA 480

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E++AL    + L R G   +AD F  +R   +    +  L G  + A IID
Sbjct: 481 RRVVERLALVLQGSLLVRHGHPAVADAFCASRLDGDHGQAYGTLPGGLDLAAIID 535


>gi|328880608|emb|CCA53847.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 557

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 200/513 (38%), Positives = 285/513 (55%), Gaps = 10/513 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  +G +      LL  +          +L  +G    S   Q  A  AN + P+L 
Sbjct: 22  NQAPPLVGHDVAEDPVLLEGVRREGAEWYLDDLHRIGRRTGSEEVQRWADEANRHEPELR 81

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHPA+H+L+  +I +GL  + W        R   H  RAA   + + 
Sbjct: 82  THDRYGNRVDEVDFHPAYHSLMDVAISEGLAGAPWADD-----RPGVHVARAAGFMVWSS 136

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            EAGH    S+T A + AL  +P +   + P + SR YDP  +AP  K  +  G+G+TEK
Sbjct: 137 AEAGHGCPVSMTYAVVPALRNSPGLAAAYEPLLTSRVYDPGLRAPGAKRGLLAGMGMTEK 196

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GGTD+ A T+     SDG + L GHKWF S+PM+D F++LAQ  G + CFLVPR+L DG
Sbjct: 197 QGGTDVRANTTTAVAASDGSWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPDG 256

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N    QRLK+K+GNRSNA+ E EF +T G+L+G+       + DM  +  LD  + S 
Sbjct: 257 ARNTFRIQRLKDKLGNRSNASSEPEFDDTVGWLVGEEGKGVRTIIDMVTMTRLDCVLGSA 316

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384
           SG R +LA+A H+AR R V G  L+DQP+M+  +AD+AL+  AAT L+ R+A + D A +
Sbjct: 317 SGTRAALAQAAHHARYRSVFGARLVDQPLMRNVLADLALESEAATTLALRIAGATDRAQR 376

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+P N I  
Sbjct: 377 GDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIWE 436

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--EDKGL-A 501
           GSGN   LDVL  L +     E   + +E   G +  ++ T  R+ +      ED  L A
Sbjct: 437 GSGNVNALDVLRALVREPESLEAFRAEVEA-AGGADARLDTAWREVLGELTRPEDAELRA 495

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R L E++AL    + L R     +AD F  +R 
Sbjct: 496 RRLVERLALVLQGSLLVRHAPAAVADAFCASRL 528


>gi|118616537|ref|YP_904869.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
 gi|118568647|gb|ABL03398.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
          Length = 553

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 193/530 (36%), Positives = 283/530 (53%), Gaps = 9/530 (1%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67
           R L    + + SD+    NQ PL    N  +S  L+ ALI        +E+  LG    S
Sbjct: 2   RLLEKCNIDRMSDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGS 61

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             AQ    +A+ N P LH +   G R D+VEF PA+H L+R +I  GLH + W       
Sbjct: 62  AQAQRWGELADRNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD---- 117

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            R  AH +RAA+  +   +E GH+   S+T A + AL   P +   + P + SREYDP  
Sbjct: 118 -RPGAHVVRAAKTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPEL 175

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           +    K  +  G+ +TEK+GG+D+ A T+Q    SDG Y L+GHKWF S+PM D F++LA
Sbjct: 176 RLASTKPGITAGMSMTEKQGGSDVRAGTTQATPNSDGTYRLTGHKWFTSAPMCDIFLVLA 235

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q  G + CF++P +L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+      
Sbjct: 236 QAPGGLSCFMLPHILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVP 295

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M  L  LD  + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  
Sbjct: 296 TIIEMVNLTRLDCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAE 355

Query: 368 AATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAT ++ R+A + D+A +    EA +  I    +KYW CK +    AEA+EC+GG+GY+E
Sbjct: 356 AATTVAMRMAGATDKAVRGDQTEALFRGIGLAASKYWVCKRSTPHAAEALECLGGNGYVE 415

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--I 484
           E  + R YRE+P   I  GSGN   LD L  +       E LF  L    G   ++   +
Sbjct: 416 ESGMPRLYREAPLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHV 475

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             LR  +   +     AR + E I LA   + L R G   + + FL  R 
Sbjct: 476 EGLRRQLGDLETIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRI 525


>gi|296168517|ref|ZP_06850333.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896695|gb|EFG76332.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 545

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 192/520 (36%), Positives = 280/520 (53%), Gaps = 11/520 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  +S  L+ ALI        +E+  +G       AQ    +A+
Sbjct: 5   SDTHVVTNQAPPLENYNPATSAVLVEALIREGGEWGLEEVNEVGAIAAGHEAQRWGELAD 64

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 65  RNRPVLHTHDRYGHRVDEVEYDPAYHELMRTAIAHGIHAAPWADE-----RPGAHVVRAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +   +E GH    S+T A + AL   P +   + P + SREYDP  +    K  +  
Sbjct: 120 KMSVW-NVEPGHTCPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLATTKRGITA 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 179 GMSMTEKQGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 238

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 239 PRILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEQGRGVPTIIEMVNLTRL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AIH+ + R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 299 DCTLGSATSMRTGLTRAIHHTQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 358

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK A    AEA+EC+GG+GY+E+  + R +RE+
Sbjct: 359 ATDKALRGDGREALLRRIGLAASKYWVCKRATPHAAEALECLGGNGYVEDSGMPRLFREA 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISLC 494
           P   I  GSGN   LD L  +       E LF+ + +  G+    G  V  + RD   L 
Sbjct: 419 PLMGIWEGSGNVSALDTLRAMATRPECIEVLFAEVAEGAGADPRLGGHVERLRRDLTDLD 478

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              +  AR + E I LA   A L R G   +A+ FL  R 
Sbjct: 479 TITQ-RARKVAEDICLALQGALLVRHGHPAVAEAFLTTRL 517


>gi|152985275|ref|YP_001346522.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960433|gb|ABR82458.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 549

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 200/529 (37%), Positives = 290/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N A  QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVAMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAVALQAKLLLEAGNSVVSDAFIGSRLGDG 524


>gi|296387501|ref|ZP_06876976.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 549

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 290/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G+N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGVNLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|229592776|ref|YP_002874895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364642|emb|CAY52560.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 559

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 200/533 (37%), Positives = 285/533 (53%), Gaps = 14/533 (2%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66
           RR  MN +HQ +++    NQPP   G N Y  D  L      F +   H  ++  G  + 
Sbjct: 5   RRPVMN-LHQFAETHDVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAHARIDAYGA-LA 62

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
                E   +AN N P   ++   G R D VEFHPA+H L+R ++  GL    W      
Sbjct: 63  GGPLMEAGFLANQNKPVFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAHP--- 119

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +  AH  RAA  YL +Q EAG     ++T A + AL   P + K W PKI S +YDP 
Sbjct: 120 --QSGAHVARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTDYDPR 177

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA 242
           N     K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DA
Sbjct: 178 NVGIAHKAGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDA 237

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+ LAQ +  + CFL+PR     + N    QRLKNK+GN SNA+ E+EF     +++G+ 
Sbjct: 238 FLTLAQTDKGLTCFLLPRHRPGDTRNEFYIQRLKNKLGNCSNASSEVEFRGALAWMIGEE 297

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+
Sbjct: 298 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQASHHCAHRSVGGRVLSEQPLMQNVLADL 357

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AA ALS R+  + D      +EA ++R++  + KYW CK APA+I EA EC+GG+
Sbjct: 358 ALESEAALALSLRMGRALDHLGD-EQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGA 416

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GK 481
           GY+E+  + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G     
Sbjct: 417 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRLLA 476

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           + I  L+ +    ++ +  AR LTE IA+A  A  L  AG+  ++D F+ +R 
Sbjct: 477 RHIEQLKSAFMDTQDMQYRARQLTEDIAVALQAKLLLEAGIAAVSDGFIASRL 529


>gi|311696230|gb|ADP99103.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 566

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 184/517 (35%), Positives = 281/517 (54%), Gaps = 13/517 (2%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQPP     N +  D +L  A +        ++L+  G    +    +L   AN N P 
Sbjct: 27  FNQPPALENYNLFEQDIALQEAALREGAGKAAEDLKAFGALAGAAQTIDLGFRANANKPV 86

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            + +   G R D+V+FHPA+H L+R +  +GLH S W    +      AH  RAA+ Y+ 
Sbjct: 87  FNTHDRFGHRIDEVDFHPAYHELMRIAFDNGLHSSPWSHPGQ-----GAHVARAAKYYMH 141

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EA H    ++T A++ ++   P +  DW  +I +  YDP N    QK+SV IG+ +T
Sbjct: 142 SQVEAAHCCPVTMTFAAIPSIRKQPELAADWEARILADSYDPRNLPDSQKSSVTIGMAMT 201

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A +++   I  G     Y L GHKWF+S+PM DAF++LAQ +  + CFL+P
Sbjct: 202 EKQGGSDVRANSTRAYPIGAGGPGQAYELVGHKWFVSAPMCDAFLVLAQTQSGLSCFLMP 261

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N    QRLKNK+GN +NA+ E E      +++G+       + +M  +   D
Sbjct: 262 RWRPDGTKNPWQVQRLKNKMGNVANASSEAELRGALAWMVGEEGRGVPTIIEMVAMTRFD 321

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S +GMR ++A+A H+ R R   G  LIDQP+M+  +AD+AL+  AA A + R+A +
Sbjct: 322 CMIGSSAGMRQAIAQASHHCRHRSAFGARLIDQPLMQNVLADLALESEAALAYTMRIARA 381

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  + +  E   AR+  P+ KYW CK  P    EAMECIGGSG +E+  + R +RESP 
Sbjct: 382 LDN-QDKEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLFRESPV 440

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           N+I  GSGN   LD L  L+K     +  F+   +  G+  +  + +  L+   +   + 
Sbjct: 441 NAIWEGSGNVQCLDTLRALQKEPETLDAFFNEAAEAKGADRRFDQFLAQLQHDFADISDF 500

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  AR L +++ALA   + L R     +AD F  +R 
Sbjct: 501 QYRARNLVDRMALALQGSLLLRHSDAAVADAFCASRL 537


>gi|126433611|ref|YP_001069302.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233411|gb|ABN96811.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 551

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 194/512 (37%), Positives = 273/512 (53%), Gaps = 9/512 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ PL    N  +S  L  ALI         E+  LG    S  AQ    +A+ N P LH
Sbjct: 18  NQVPLLEDHNPAASPVLTEALIREGGEWGLDEVAELGALSGSAQAQRWGELADRNRPVLH 77

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+ PA+H+L+  ++  GLH + W        R  AH +RAA+  +   
Sbjct: 78  THDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKTSVWTP 132

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            E GH+   S+T A + AL   P +   + P + SR YDP  K P  K  +  G+ +TEK
Sbjct: 133 -EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGMSMTEK 191

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR+L DG
Sbjct: 192 QGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD  + S 
Sbjct: 252 TRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384
           + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + D A +
Sbjct: 312 TSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVR 371

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EA   RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P   I  
Sbjct: 372 GDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  +       E LF  L Q  G   +    +  LR ++      +  AR
Sbjct: 432 GSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRPALDDLATVQYRAR 491

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + E I LA   A L R G   +A+ FL  R 
Sbjct: 492 KVAEDICLALQGALLVRHGHPAVAEAFLATRL 523


>gi|15607812|ref|NP_215186.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium tuberculosis H37Rv]
 gi|15840075|ref|NP_335112.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31791856|ref|NP_854349.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium bovis AF2122/97]
 gi|121636593|ref|YP_976816.1| putative acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660447|ref|YP_001281970.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra]
 gi|148821877|ref|YP_001286631.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11]
 gi|215410226|ref|ZP_03419034.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 94_M4241A]
 gi|215425912|ref|ZP_03423831.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|215429511|ref|ZP_03427430.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|215444795|ref|ZP_03431547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T85]
 gi|218752323|ref|ZP_03531119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|219556519|ref|ZP_03535595.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|224989065|ref|YP_002643752.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797614|ref|YP_003030615.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435]
 gi|254230997|ref|ZP_04924324.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C]
 gi|254363621|ref|ZP_04979667.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549632|ref|ZP_05140079.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260199681|ref|ZP_05767172.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|260203843|ref|ZP_05771334.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289442071|ref|ZP_06431815.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|289552928|ref|ZP_06442138.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605]
 gi|289568613|ref|ZP_06448840.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|289573278|ref|ZP_06453505.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289749177|ref|ZP_06508555.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|289752720|ref|ZP_06512098.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|289756760|ref|ZP_06516138.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85]
 gi|289760798|ref|ZP_06520176.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|294993022|ref|ZP_06798713.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 210]
 gi|297633170|ref|ZP_06950950.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207]
 gi|297730150|ref|ZP_06959268.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN R506]
 gi|298524164|ref|ZP_07011573.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774782|ref|ZP_07413119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001]
 gi|306781485|ref|ZP_07419822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002]
 gi|306783322|ref|ZP_07421644.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003]
 gi|306787692|ref|ZP_07426014.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004]
 gi|306794458|ref|ZP_07432760.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005]
 gi|306796426|ref|ZP_07434728.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006]
 gi|306802285|ref|ZP_07438953.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008]
 gi|306806495|ref|ZP_07443163.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007]
 gi|306966693|ref|ZP_07479354.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009]
 gi|306970886|ref|ZP_07483547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010]
 gi|307078614|ref|ZP_07487784.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011]
 gi|307083178|ref|ZP_07492291.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012]
 gi|313657477|ref|ZP_07814357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN V2475]
 gi|3261533|emb|CAA17469.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE8 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880223|gb|AAK44926.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31617443|emb|CAD93553.1| PROBABLE ACYL-COA DEHYDROGENASE FADE8 [Mycobacterium bovis
           AF2122/97]
 gi|121492240|emb|CAL70707.1| Probable acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124600056|gb|EAY59066.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C]
 gi|134149135|gb|EBA41180.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504599|gb|ABQ72408.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra]
 gi|148720404|gb|ABR05029.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11]
 gi|224772178|dbj|BAH24984.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319117|gb|ACT23720.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435]
 gi|289414990|gb|EFD12230.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|289437560|gb|EFD20053.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605]
 gi|289537709|gb|EFD42287.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289542367|gb|EFD46015.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|289689764|gb|EFD57193.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|289693307|gb|EFD60736.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|289708304|gb|EFD72320.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|289712324|gb|EFD76336.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85]
 gi|298493958|gb|EFI29252.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216675|gb|EFO76074.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001]
 gi|308325783|gb|EFP14634.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002]
 gi|308331818|gb|EFP20669.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003]
 gi|308335604|gb|EFP24455.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004]
 gi|308337221|gb|EFP26072.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005]
 gi|308343087|gb|EFP31938.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006]
 gi|308346971|gb|EFP35822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007]
 gi|308350951|gb|EFP39802.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008]
 gi|308355547|gb|EFP44398.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009]
 gi|308359506|gb|EFP48357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010]
 gi|308363410|gb|EFP52261.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011]
 gi|308367048|gb|EFP55899.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012]
 gi|323720896|gb|EGB29962.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CDC1551A]
 gi|326905106|gb|EGE52039.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis W-148]
 gi|328457395|gb|AEB02818.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207]
          Length = 542

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/519 (36%), Positives = 277/519 (53%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  SS  L+ ALI         E+  +G    SC AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL     +   + P + SREYDP  K    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF S+PM D F++LAQ    + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +    EA   RI     KYW CK + A  AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  +    
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                AR + E I LA   + L R G   +A+ FL  R 
Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 514


>gi|315506048|ref|YP_004084935.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315412667|gb|ADU10784.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 542

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 196/535 (36%), Positives = 286/535 (53%), Gaps = 9/535 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           +NQ P  +G +     +L   +           L  LG       A E  R+AN + P L
Sbjct: 7   VNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEHPPVL 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA  YL  
Sbjct: 67  RTHDRYGHRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGFYLW- 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           + +AGH    S+T A++ AL  +P +   + P + +REY    + P  K  +  G+ +TE
Sbjct: 121 RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYHFGLRPPQTKRGLLAGMSMTE 180

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR+L D
Sbjct: 181 KQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPD 240

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD  I +
Sbjct: 241 GTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDCVIGA 300

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383
            +GMR  +  A+H+A  R   G  L DQP+M+  +AD+A++  AAT L  RLA + D  A
Sbjct: 301 AAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGATDRSA 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    E A+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP NSI 
Sbjct: 361 RGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIW 420

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGLA 501
            GSGN   LDVL  L +   +     + +    G+  +    +  +RD ++   + +  A
Sbjct: 421 EGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADARLDAAVRRVRDELADHTDLELRA 480

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E++AL    A L R G   +ADVF  +R   +    +  L G  + A IID
Sbjct: 481 RRVVERLALVLQGALLVRHGHPAVADVFCASRLDGDHGQAYGTLPGGLDLAAIID 535


>gi|108797948|ref|YP_638145.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867045|ref|YP_936997.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768367|gb|ABG07089.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693134|gb|ABL90207.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 551

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/512 (37%), Positives = 273/512 (53%), Gaps = 9/512 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ PL    N  +S  L  ALI         E+  LG    S  AQ    +A+ N P LH
Sbjct: 18  NQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRNRPVLH 77

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+ PA+H+L+  ++  GLH + W        R  AH +RAA+  +   
Sbjct: 78  THDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKTSVWTP 132

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            E GH+   S+T A + AL   P +   + P + SR YDP  K P  K  +  G+ +TEK
Sbjct: 133 -EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGMSMTEK 191

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR+L DG
Sbjct: 192 QGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD  + S 
Sbjct: 252 TRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384
           + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + D A +
Sbjct: 312 TSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVR 371

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EA   RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P   I  
Sbjct: 372 GDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  +       E LF  L Q  G   +    +  LR ++      +  AR
Sbjct: 432 GSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSALDDLATVQYRAR 491

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + E I LA   A L R G   +A+ FL  R 
Sbjct: 492 KVAEDICLALQGALLVRHGHPAVAEAFLATRL 523


>gi|167835047|ref|ZP_02461930.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 559

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 289/521 (55%), Gaps = 17/521 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVDAVRRYDASWHQTALSRDGAALTTPDALALAELANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL     +GLH   +    EP  +  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQHEPALFATLRDKLYAREHDARDVPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+  GR G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAAGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGRAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DG  N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGGKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L +QP+M+  +AD+AL+  AATAL  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLALESEAATALFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFDEWRDAARYSAPLADALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            E +   AR + ++IAL + A+ L R G   +A  F+  RF
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPAAVAQAFVATRF 529


>gi|254236865|ref|ZP_04930188.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719]
 gi|126168796|gb|EAZ54307.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719]
          Length = 549

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 289/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LTGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|15599167|ref|NP_252661.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107103490|ref|ZP_01367408.1| hypothetical protein PaerPA_01004560 [Pseudomonas aeruginosa PACS2]
 gi|9950162|gb|AAG07359.1|AE004815_3 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 549

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 289/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|76808825|ref|YP_331824.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167843843|ref|ZP_02469351.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167909057|ref|ZP_02496148.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|254188119|ref|ZP_04894631.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254258181|ref|ZP_04949235.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|76578278|gb|ABA47753.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157935799|gb|EDO91469.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254216870|gb|EET06254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 559

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTAPDVLALAELANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|237810404|ref|YP_002894855.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|237505559|gb|ACQ97877.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 559

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRQYGASWRQTALSHDGAALTTPDVLALAELANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|134283582|ref|ZP_01770281.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|134244991|gb|EBA45086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 559

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALAELANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPFTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|266631113|emb|CBH32113.1| putative acyl-CoA dehydrogenase [Streptomyces albaduncus]
          Length = 545

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 202/513 (39%), Positives = 287/513 (55%), Gaps = 10/513 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G +  + D +L+  +    +  H  +L  LG    S  AQ  A  AN + P+L
Sbjct: 13  NQPPPLTGHDT-ADDPVLLEGVHREGAAWHLDDLHRLGRLAGSEEAQGWADQANRHEPEL 71

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V+FHPA+H+L+  S+  G+  + W        R  AH  RAA   L  
Sbjct: 72  RTHDRYGHRVDEVDFHPAYHSLMDVSVSAGIAGAAWTDE-----RPGAHVARAASFMLAT 126

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            LE GHL   S+T A + AL   P + K + P + SR YDP  + P  K  +  G+G+TE
Sbjct: 127 MLEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRVPAGKRGLLAGMGMTE 186

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFLVPR+L D
Sbjct: 187 KQGGTDVRANTTAATEQADGRWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPD 246

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  +  LD  + S
Sbjct: 247 GSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 306

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +G R +LA+A H+AR R V G  LIDQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 307 AAGTRAALAQAAHHARHRSVFGAELIDQPLMRNVLADLALESEAATTLALRLAGAADRAQ 366

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+P N I 
Sbjct: 367 RGDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 426

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LD+L  L +     E   + +E   G+  +       L+  + L ++    A
Sbjct: 427 EGSGNVNALDMLRALTREPESLEAYRAEVEPAAGADRRLDAAWRELQGELVLTEDASLRA 486

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R + E+ AL    + L R     +AD F  +R 
Sbjct: 487 RRVIERAALVLQGSLLVRHAPAPVADAFCASRL 519


>gi|313109412|ref|ZP_07795372.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310881874|gb|EFQ40468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 549

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG   ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNAAVSDAFIGSRLGDG 524


>gi|217424949|ref|ZP_03456445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|217391969|gb|EEC31995.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 559

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|254393001|ref|ZP_05008165.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706652|gb|EDY52464.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 552

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80
           NQ P  +G + +++D  L  A+  + P+             G    S  AQE   +AN  
Sbjct: 18  NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 77

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 78  PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGR-------PSGHVRRAAGF 129

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K     G+
Sbjct: 130 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 189

Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A  T+     + G Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 190 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 249

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 250 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 309

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL  RLA +
Sbjct: 310 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 369

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 370 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 427

Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493
           NSI  GSGN   LDVL  L++     N F Q   L    +  L  + K ++T L D   +
Sbjct: 428 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 487

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 488 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 524


>gi|70732730|ref|YP_262493.1| hypothetical protein PFL_5425 [Pseudomonas fluorescens Pf-5]
 gi|68347029|gb|AAY94635.1| fadE8 [Pseudomonas fluorescens Pf-5]
          Length = 550

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 199/532 (37%), Positives = 286/532 (53%), Gaps = 25/532 (4%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCT 69
           +HQ +++    NQPP   G N Y  D  L   +  F      S V     L G  ++   
Sbjct: 3   LHQFAETHEVTNQPPALDGANLYRIDLPLQQWMRRFDAGWAESRVDAYGALAGGPLM--- 59

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
             E   +AN N P   ++   G R D VEFHPA+H L++ +I  GL    W    +P  +
Sbjct: 60  --EAGFLANQNKPVFSSHDRFGHRIDLVEFHPAYHQLMQAAIEAGLTSLPWT---DP--Q 112

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH  RA+  YL +Q EAG     ++T A + AL   P +   W PKI +  YDP N  
Sbjct: 113 AGAHVARASMTYLHSQAEAGSGCPLTMTFACVPALKLQPDIADQWLPKILATRYDPRNVG 172

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIM 245
              K  + IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ 
Sbjct: 173 MQHKAGLTIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLT 232

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           LAQ +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+    
Sbjct: 233 LAQTDKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNLSNASSEVEFRGALAWMIGEEGRG 292

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M  +   D  + S S MR +L +A H+   R V G +L +QP+M+  +AD+AL+
Sbjct: 293 VPTIIEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALE 352

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA ALS R+  + D     ++EA ++R++  + KYW CK APA+I EA EC+GG+GY+
Sbjct: 353 SEAALALSMRMGRALDHLDD-AQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGAGYV 411

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-- 483
           E+  + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G   K++  
Sbjct: 412 EDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGN--GHGDKRLAA 469

Query: 484 -ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            I  L++S     + +  AR LTE IAL   A  L  AG   ++D F+ +R 
Sbjct: 470 HINGLKESFKDTGDIQYRARQLTEDIALGLQAKLLLEAGNQVVSDAFIASRL 521


>gi|326382864|ref|ZP_08204554.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198454|gb|EGD55638.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 540

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/523 (36%), Positives = 283/523 (54%), Gaps = 16/523 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P  + +N Y+S + LV  +  +      + L   G  V     Q  A +AN  TP+
Sbjct: 8   FNQAPQRVDVNEYTSHTALVEAVGVYGGGWATDALTEAGALVGRADFQRDAELANAITPK 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   G R D +EFHPA+H ++  +I  G H S W    +P  R  AH  RAA     
Sbjct: 68  LHTHDRWGNRIDDIEFHPAYHRIIGDAIAHGAHTSCWS---DP--RDGAHVARAAMFMQF 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q+E GH    S+T A + +L    ++ + W P++FS +Y   +    QKTS   G+ +T
Sbjct: 123 GQIEPGHACPVSMTHAVVPSLRVDEKLAEQWLPRVFSNDYQ-HDLGSGQKTSAIFGMAMT 181

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GG+D+ A T++  + SDG Y ++GHKWF S+P SDAF++LA+ +  V CF+VPR+L 
Sbjct: 182 EKQGGSDVRANTTRAVEQSDGTYLITGHKWFCSAPQSDAFLVLAKTDPGVTCFVVPRVLP 241

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ N    QRLK+K+GN+SNA+ E+EF  T G+ LGD       + +M     LD  + 
Sbjct: 242 DGTRNVFNVQRLKDKLGNKSNASSEVEFDRTVGWRLGDEGAGVRTIIEMVNQTRLDCILG 301

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S +GMR S+AEA  + R R   G  LIDQP M   +AD+ ++  AA   + RLA+++D+ 
Sbjct: 302 SAAGMRQSVAEAAWHVRNRAAFGATLIDQPAMTAVVADLQVEAEAAIWTAMRLASAYDD- 360

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-SIARHYRESPANSI 442
               E AA+ R+   + KYW CK  P    EA+EC+GG+GY E    ++R YRE P  ++
Sbjct: 361 -DAEESAAFRRLATAVGKYWVCKRGPNHAYEALECLGGNGYCENGFPLSRRYREQPVMAV 419

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKE 496
             GSGN + LDVL  + +     E + +  E+ LG         +K   ++  + +    
Sbjct: 420 WEGSGNVIALDVLRAMMRDPMSVEAVDNEFERGLGVYREYDLHVEKTRKLIAQAAADPNA 479

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
              LAR LTE +A+A   + L R     + D F+  R  D  H
Sbjct: 480 APALARRLTESMAIALQGSILIRQAPESVTDAFIAGRIADPGH 522


>gi|170696029|ref|ZP_02887166.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170139021|gb|EDT07212.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 569

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 208/577 (36%), Positives = 312/577 (54%), Gaps = 36/577 (6%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVL 66
           +R +  Q H+ +      NQ P     N +S+D+ L A +    +  H++  L  G  + 
Sbjct: 2   QRHSFGQTHEVT------NQVPPLADYNLFSTDAALSAALERDGAAWHRDALLRHGAALT 55

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +     LA +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +    +P
Sbjct: 56  TPETLALAELANRHTPELSTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP 112

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R  A   R A  +L AQ+E+G L   ++T AS+  L   P++ +    K+++R +DP 
Sbjct: 113 --RPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFETLRDKLYARGHDPR 170

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242
           +    QK S  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA
Sbjct: 171 DVPLAQKASAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDA 230

Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            ++LA+    VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++G
Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           D       + +M     LD  I S + MR +L +AIH+AR R   G  L+DQP+M+  +A
Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLA 350

Query: 361 DIALDIAAATALSFRLANSFDEAKS------------RSEEAAYARIMAPITKYWCCKMA 408
           D+AL+  AATAL  RLA +F+++               S E A+ RI+ P  KYW CK A
Sbjct: 351 DLALESEAATALFMRLAQAFEQSADAGTATSAADSAAASAERAWRRIVTPAAKYWVCKRA 410

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                EAME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +  + L
Sbjct: 411 LEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQAL 470

Query: 469 FSTLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           F+  + D  +       + + + +L    +  +  AR + ++I L + A  L R     +
Sbjct: 471 FAQWQADAAAHPALSAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVRHSPAVV 530

Query: 526 ADVFLENRFLDNCHST---HCMLHGRFNAAHIIDSLY 559
           A+ F+  R  D C  +   +  L   F+ A I++  +
Sbjct: 531 AEAFIATRLADGCGESGRVYGTLPATFDHAAIVERAF 567


>gi|260185554|ref|ZP_05763028.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
 gi|289446231|ref|ZP_06435975.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
 gi|289419189|gb|EFD16390.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
          Length = 542

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/519 (36%), Positives = 277/519 (53%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  SS  L+ ALI         E+  +G    SC AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL     +   + P + SREYDP  K    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF S+PM D F++LAQ    + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +    EA   RI     KYW CK + A  AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  +    
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                AR + E I LA   + L R G   +A+ FL  + 
Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATQL 514


>gi|312200505|ref|YP_004020566.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311231841|gb|ADP84696.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 591

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/526 (36%), Positives = 279/526 (53%), Gaps = 13/526 (2%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           +P+ +    NQPP  +  +      L   L     +    +L  LG    S  A     +
Sbjct: 41  RPAVTHVVTNQPPPLVDYDVADDPVLEEGLRREGAAFYVDDLHRLGWLAGSEQAARWGDL 100

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN + P+L  +   G R D+V+FHP+WHAL+  ++ +GL  + W        R  AH  R
Sbjct: 101 ANRHVPELRTHDRYGNRIDEVDFHPSWHALMDVAVREGLAGAAWGSR-----RPGAHVAR 155

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA L++ + +E GH    S+T A + AL   P +   +   + SR YD     P  K  +
Sbjct: 156 AAGLHVWSTVEQGHTCPVSMTYAVIPALRAEPELAAVYEKLLTSRVYDRALCPPTGKLGL 215

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             G+G+TEK+GG+D+ A T+      DG Y L GHKWF S+PMSD F++LAQ    + CF
Sbjct: 216 IAGMGMTEKQGGSDVRANTTVAVAHPDGGYRLHGHKWFTSAPMSDLFLVLAQAPSGLSCF 275

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T G+L+G        + +M  + 
Sbjct: 276 LVPRILPDGSRNTFRIQRLKDKLGNRSNASAEPEFDDTVGWLVGPEGRGVRTIIEMVAMT 335

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             DSA+ S +G R +L +A+H+AR R   G +L+D+P+M+  +AD+A++  AAT L  RL
Sbjct: 336 RFDSALGSAAGTRAALVQAMHHARHRSAFGALLVDKPLMRNVLADLAVESEAATTLVLRL 395

Query: 377 ANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A + D   +  + E A+ R+   + K+W CK  P  +AEA+EC+GG+GY EE  + R YR
Sbjct: 396 AGAIDRGVRGDAGERAFLRLATALAKFWICKRQPGFVAEALECLGGNGYAEESGMPRLYR 455

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR-DSIS 492
           E+P NSI  G+GN   LDVL  L +         + + +  G   +    I  LR D   
Sbjct: 456 EAPLNSIWEGAGNVNALDVLRALGREPAAVAAFDAEVARSAGGDDRLDAAIAALRADLAG 515

Query: 493 LCKEDKGL----ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L   D       AR L E++AL    A L R     +AD F   R 
Sbjct: 516 LPTADPSELEFGARGLVERMALVLQGALLVRHAPPAVADAFCATRL 561


>gi|167579430|ref|ZP_02372304.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 559

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 203/528 (38%), Positives = 288/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +  A  LA +AN + P+L
Sbjct: 14  NQVPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDALALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL     +GLH   +    EP  +  A   R A  YL A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYYLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K++SRE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+  G  G  CF V
Sbjct: 189 KQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATAL  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368

Query: 379 SF-DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F +EA +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+  +    L          S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLAGALAELTHLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF +    T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSET 536


>gi|91785604|ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91689558|gb|ABE32758.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 561

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 198/568 (34%), Positives = 303/568 (53%), Gaps = 28/568 (4%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLS 67
           R +  Q H+ +      NQ P     N +SSD+ L A +    +  H++  L  G  + +
Sbjct: 3   RHSFGQTHEVT------NQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTT 56

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                LA +AN +TP+L  + P GER D +EFHP+WH LL     +GLH   +    +P 
Sbjct: 57  PETLALAELANRHTPELFTHSPRGERIDALEFHPSWHTLLSLLRREGLHALPFS---DP- 112

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            ++ A   R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+DP +
Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRD 171

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243
                K S  IG+G+TEK+GG+D+ +  ++    +       Y L GHKWF S+P  DA 
Sbjct: 172 VPLTHKNSAMIGMGMTEKQGGSDVRSNQTRAYATAGSGRGAAYRLVGHKWFFSAPQCDAH 231

Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++L + +   G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD
Sbjct: 232 LVLGRTDDHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD
Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351

Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +AL+  AAT L  RLA +F+E    A +   E A+ RI+ P  KYW CK A     EAME
Sbjct: 352 LALESEAATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +    LF+  +++  
Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAARALFAAWQREAQ 471

Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +       + + + +     +  +  AR + +++ L + A  L      ++A+ F+  R 
Sbjct: 472 AHPALSAALGKLAAAFNGPAEHREASARRIAQQVVLIAQATLLLEHAPAEVAEAFIATRL 531

Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559
            D C  +   +  L   F+ A I++  +
Sbjct: 532 ADGCGESGRVYGTLPATFDHAAIVERAF 559


>gi|254196543|ref|ZP_04902967.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|169653286|gb|EDS85979.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
          Length = 559

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   +  + CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAAISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREAYARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|296100949|ref|YP_003611095.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295055408|gb|ADF60146.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 540

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 195/517 (37%), Positives = 283/517 (54%), Gaps = 9/517 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD  L   +A   +    EL   +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPAPLSNSNLFLSDCALRDAVAREGAEWDSELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y P GER D V FHPAWH L++    + +H   W    E   RK + 
Sbjct: 59  GRLANVNPPELLRYDPTGERLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARKGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   ++W   + S  YDP      Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPVTMTFAATPLLQQALPEPFQNWLTPLLSDRYDPHLAPGAQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S   MR +L+ A+++A +R   G  LIDQP+M+  ++ +AL +   TAL
Sbjct: 295 GGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMRDVLSRMALVLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D+ ++  +EAA+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDK-RADPQEAAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +F+ L     Q  G       +  +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPGMFDLLAEDFAQVKGQDRHFDRSWRQLQQK 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           L K  +   R +  ++ L  + + + R     +A  +
Sbjct: 474 LRKPQEAQGREIAHQLFLLGAGSQMLRHASPPVAQAW 510


>gi|294815734|ref|ZP_06774377.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328333|gb|EFG09976.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
          Length = 544

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80
           NQ P  +G + +++D  L  A+  + P+             G    S  AQE   +AN  
Sbjct: 10  NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 70  PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGRP-------SGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K     G+
Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 181

Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A  T+     + G Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 182 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 242 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL  RLA +
Sbjct: 302 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 362 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493
           NSI  GSGN   LDVL  L++     N F Q   L    +  L  + K ++T L D   +
Sbjct: 420 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 479

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 480 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 516


>gi|167822249|ref|ZP_02453720.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|167892344|ref|ZP_02479746.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167900838|ref|ZP_02488043.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917097|ref|ZP_02504188.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|226199731|ref|ZP_03795282.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254182190|ref|ZP_04888787.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184212728|gb|EDU09771.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|225928082|gb|EEH24118.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 559

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|256380216|ref|YP_003103876.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924519|gb|ACU40030.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 529

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 197/533 (36%), Positives = 285/533 (53%), Gaps = 19/533 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           LNQ P   G +     +LL AL          EL  LG    S   QEL R+AN + P L
Sbjct: 9   LNQVPPLTGHDVADDPALLTALRLGGAGWAEAELRELGVLAGSARVQELGRLANEHPPVL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPAWH L+  +I  GLH + W        R  AH  RAA+  + +
Sbjct: 69  RTHDRWGHRVDEVEFHPAWHELMTTAIGRGLHAAPWRDE-----RPGAHVARAAKFLVWS 123

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    S+T A++ AL  +P +   + P + S EYD   + P  K  +  G+ +TE
Sbjct: 124 QVEAGHGCPVSMTYAAVPALRRSPWLAARFEPLLASPEYDFGLRPPESKRGLVAGMSMTE 183

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++  +  D  + L+GHKWF S+PMSD F+ LAQ +  + CFLVPR+L D
Sbjct: 184 KQGGSDVRANTTRAVRSGD-HHVLTGHKWFTSAPMSDLFLTLAQADEGLSCFLVPRVLPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLK+K+GNRSNA+ ELE+    G+L+G+       + +M     LD  + S
Sbjct: 243 GTRNAISLQRLKDKLGNRSNASAELEYDGAVGWLVGEPGRGVRTIIEMVNATRLDCVLGS 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +GMR  L +A H+A  R   G  L+DQPVM+  +AD+A++  AAT +   LA S     
Sbjct: 303 AAGMRAGLVQAAHHAAHRRAFGAALVDQPVMRAVLADLAVESEAATTVGLWLAGS----- 357

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R+   + KYW CK  PA  AEA+EC+GG+GY+EE  + R +RESP  S+  
Sbjct: 358 -------RGRLGLAVAKYWVCKRGPAHAAEALECLGGNGYVEESGMPRLFRESPLMSVWE 410

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503
           GSGN   LDVL +L +  +   +  + L+   G+  +    +      L + D +  AR 
Sbjct: 411 GSGNVAALDVLRVLAREPDAVVEFTAELDAAAGADRRLDAAVRELKAMLVEPDPESRARR 470

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           L E++AL    + L R G   +AD F  +R   +       L    +A  I++
Sbjct: 471 LVERMALVLQGSLLVRHGHPAVADAFCASRLAGDWGVAFGTLPAGVDAKAIVE 523


>gi|239932731|ref|ZP_04689684.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 481

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 181/458 (39%), Positives = 255/458 (55%), Gaps = 7/458 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQP      +A     LL  L         ++L  LG    S   QE +  AN + P+L 
Sbjct: 25  NQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSEQANRHEPELR 84

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 85  THDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVARTAGGLVWGH 139

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A++  L   P + K + P + SREY+P  + P +K  +  G+G+TEK
Sbjct: 140 TDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRGLLAGMGMTEK 199

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 200 QGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 259

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  +MS
Sbjct: 260 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 319

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 320 AALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 379

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P  SI 
Sbjct: 380 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 439

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GSGN   LDVL  L +     + L   L    G+  +
Sbjct: 440 EGSGNVNALDVLRALGRDPATAQALLDELALSRGADAR 477


>gi|254242658|ref|ZP_04935980.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192]
 gi|126196036|gb|EAZ60099.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192]
          Length = 549

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K     + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFAETADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|146308779|ref|YP_001189244.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576980|gb|ABP86512.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 549

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/526 (37%), Positives = 281/526 (53%), Gaps = 15/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  +  +F  NQ P   G N Y  D  L   +  +     +E L   G        Q  
Sbjct: 5   LHAETHEVF--NQVPSLDGANLYRLDLPLQEWVRRYDGAWAEERLSAYGALAGGALMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P   ++   G R D VEFHPA+H L+R +I  GL    W    +P  R  AH
Sbjct: 62  GFLANENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAIEHGLPSLPWT---DP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q E+      ++T A++ A+   P V + W PKI + EYDP N    QK
Sbjct: 117 VARAGLSYLHSQAESASGCPLTMTFAAVPAIRLQPNVAEQWLPKILASEYDPRNLPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   I  G     Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+   F ++LG+       +
Sbjct: 237 DKGLSCFLLPRHRPDGTRNQFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S S MR +L +A H+   R V G +L DQP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLADQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL  R+  + D      E+  +AR++  + KYW CK AP ++ EA EC+GG+GY+EE  
Sbjct: 357 LALCMRMGRALDHLHDEQED-KFARLVTAVGKYWICKRAPEMVYEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF  L    G +  K  I  L+
Sbjct: 416 MPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFDELGDGHGDARLKAHIQRLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              S   + +  AR LTE +A+A  A  L  AG + ++D F+ +R 
Sbjct: 476 TDFSDTADIQYRARQLTEDMAVALQAKLLLEAGNSVVSDAFIASRL 521


>gi|326444079|ref|ZP_08218813.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
          Length = 537

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80
           NQ P  +G + +++D  L  A+  + P+             G    S  AQE   +AN  
Sbjct: 3   NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL    W R          H  RAA  
Sbjct: 63  PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGRP-------SGHVRRAAGF 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K     G+
Sbjct: 115 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 174

Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A  T+     + G Y L+GHKWF S+PMSD F++LAQ  G + CFLVP
Sbjct: 175 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 234

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 235 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 294

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL  RLA +
Sbjct: 295 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 354

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R  RE+P 
Sbjct: 355 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 412

Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493
           NSI  GSGN   LDVL  L++     N F Q   L    +  L  + K ++T L D   +
Sbjct: 413 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 472

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               +  AR L E++AL    + L R    ++AD F  +R 
Sbjct: 473 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 509


>gi|126442217|ref|YP_001057268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126221710|gb|ABN85216.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
          Length = 559

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRTEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|12744504|gb|AAK06659.1|AF317886_2 putative acyl-CoA dehydrogenase [Burkholderia pseudomallei]
          Length = 554

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 9   NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 69  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 123

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 124 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 183

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 184 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 243

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 244 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 303

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 304 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 363

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 364 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 423

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 424 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 483

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 484 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 531


>gi|83718514|ref|YP_440751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167617528|ref|ZP_02386159.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
 gi|257140600|ref|ZP_05588862.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83652339|gb|ABC36402.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 559

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 202/528 (38%), Positives = 287/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL     +GLH   +    EP  +  A   R A  YL A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYYLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K++SRE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+  G  G  CF V
Sbjct: 189 KQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATAL  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368

Query: 379 SF-DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F +EA +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+  +    L          S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAELTHLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF +    T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSET 536


>gi|218889745|ref|YP_002438609.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218769968|emb|CAW25730.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 549

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L   +  +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K     + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|109900211|ref|YP_663466.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109702492|gb|ABG42412.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 548

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 174/459 (37%), Positives = 263/459 (57%), Gaps = 14/459 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKEL-ELLGEYVLSCTAQELARMANYN 80
           NQP +    N +S+D +L+  +    ++ P+    +   + G+ +++        +AN N
Sbjct: 14  NQPQVLSPYNLWSADRMLMHAVQQNHSDLPTSTLSDFGNIAGDQLMNA-----GELANKN 68

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            PQ   +   G R D VEFHPA+H L+  ++   +H   W           +H IRAA L
Sbjct: 69  KPQFQPFDGYGRRIDNVEFHPAYHELMGEAMAAQVHAYSWKNE----STSGSHVIRAALL 124

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           ++ +Q +AG     ++T A + AL   P + + W  K+ S EYDP +    QK  + +G+
Sbjct: 125 FMHSQADAGTTCPLTMTHAGVAALKNAPDLPRYWTDKVISGEYDPRSIPASQKRGITLGM 184

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GG+D+   T++    +DG Y ++GHK+F S+PM DA ++LAQ    + CFL+PR
Sbjct: 185 GMTEKQGGSDVRRNTTRADIQADGSYRITGHKFFFSAPMCDAHLILAQSTKGLSCFLLPR 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +LEDGS N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD 
Sbjct: 245 ILEDGSLNHVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGRGVPVIIDMVSLTRLDC 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S S MR +L +A+H+ + R   G  LIDQP+MK  +AD+ L++AA+ AL+ R+A + 
Sbjct: 305 MIGSTSLMRQALVQALHHTQHREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVARAV 364

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A +   EA  +RI   I KYW CK  PA + EA EC+GG GY+EE  + R YR++P N
Sbjct: 365 DLANTNQHEAHLSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENILPRLYRQAPLN 424

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           SI  GS N   LDVL  L K       LF+ L++  G +
Sbjct: 425 SIWEGSANVQCLDVLRALRKEPEAINALFAELQRAAGKN 463


>gi|167736637|ref|ZP_02409411.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
          Length = 559

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLVRLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|294340427|emb|CAZ88808.1| isovaleryl CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 543

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 200/512 (39%), Positives = 282/512 (55%), Gaps = 9/512 (1%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N +++D +L  AL         ++L   G  + +  + +  R+AN NTP L
Sbjct: 10  NQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGTAASYKQGRLANQNTPVL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+   G R D++EFHPAWHAL+      GLH   W R      +  AH  RAA   L  
Sbjct: 70  RAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWARP-----QPGAHVARAAGFILQT 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG +   ++T  ++ A+     + +DW P +   EYDP +  P QK    IG+G+TE
Sbjct: 125 QIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPPAQKRGGLIGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ + T++ +    G Y L+GHKWF S+P  DA ++LAQ  G + CF VPR   D
Sbjct: 185 KQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGLSCFFVPRWAPD 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N +  QRLK+K+GNRSNA+ E+EF   +G LLG+       + +M     LD  + +
Sbjct: 245 GSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMGTYTRLDCVLGT 304

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR +L++A+HYAR R   G  LIDQP+M+  +AD+AL++ AA AL+ RLA +FD   
Sbjct: 305 TGLMRQALSQAVHYARHRQAFGAALIDQPLMRNVLADMALEVEAAIALALRLAQAFDSQH 364

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + ++   R++ P  K+  CK    + AEAME +GG+GY+EE   AR YRE P NSI  
Sbjct: 365 DEA-QSLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDMQARIYREMPVNSIWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGLAR 502
           GSGN M LDVL  L K     + L + L Q  G +      + R S +L   D  +  AR
Sbjct: 424 GSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSAALRDTDAQQSRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            LT  + LA  AA L R     IA  F  +R 
Sbjct: 484 ALTHDLVLALQAALLLRHAPEPIAQAFCASRL 515


>gi|254448697|ref|ZP_05062155.1| fadE8 [gamma proteobacterium HTCC5015]
 gi|198261705|gb|EDY85992.1| fadE8 [gamma proteobacterium HTCC5015]
          Length = 579

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 191/524 (36%), Positives = 275/524 (52%), Gaps = 14/524 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           S++    NQPP     N +  D  LV  + +       E +  +G+ +      E    A
Sbjct: 33  SETHEVFNQPPHLEDFNTFEQDQPLVDALHHAGGDWGVEAVTRIGDLLGRAEWIERGFQA 92

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P+ H++   G R D+V+FHPA+H L+  +I   +H + W+       +K AH +R 
Sbjct: 93  NENKPEFHSHDRYGHRIDRVDFHPAYHDLMALAIEHNIHAAPWN-----TPQKGAHAVRL 147

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q EAG     ++T A + A+  TP V K W PKI SREYDP+ +   +K    
Sbjct: 148 AMNYLYNQNEAGSACPLTMTFACVPAIQKTPSVAKQWLPKILSREYDPSFQPIDKKRGAT 207

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           IG+ +TEK+GGTD+ A TS    + D       Y + GHKWF S+PM DAF+ LAQ E  
Sbjct: 208 IGMAMTEKQGGTDVRANTSYAYPMGDKEGAGAEYEIVGHKWFCSAPMCDAFLTLAQTESG 267

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFL+PR   DGS N    QRLK+K+GNRSNA+ E+EF   F ++LGD       + +M
Sbjct: 268 LSCFLLPRWRPDGSRNEFYIQRLKDKMGNRSNASSEVEFRGAFAWMLGDEGRGVPTIIEM 327

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D  I S S MR ++A+  H+   R V G  LI+QP+M+   AD+ L++  A A+
Sbjct: 328 VALTRYDCMIGSTSLMRQAVAQVTHHIAHREVMGKRLIEQPLMQNVAADLCLEVEGALAM 387

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA + D  +   E+    R+   + KYW CK A   I E+ EC+GG GY+EE  ++R
Sbjct: 388 TMRLATALDTPEDEQEQ-NLVRLTTAVGKYWICKRATHHIGESQECLGGIGYVEESIMSR 446

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
            YRE+P NSI  GSGN   LDVL  + K   + +   + LE+      +    +  L+  
Sbjct: 447 LYREAPVNSIWEGSGNVQCLDVLRAVGKAPEVLDTFIAELEKASSRQAEYDASLAALKSQ 506

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +S  +  +  AR + E +A    A  L   G   I + F   R 
Sbjct: 507 LSDFENFQFRARSIVEHMARQMQACQLILMGNELIYNAFCRARL 550


>gi|237729115|ref|ZP_04559596.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|226908844|gb|EEH94762.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2]
          Length = 546

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 191/521 (36%), Positives = 285/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H  + ++F  NQP      N Y SD  L  A+I          L  +G+ + +  + 
Sbjct: 5   DTMHWQTHTVF--NQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN   P+L  Y P G+R D V FHPAWH L++    + +H   W+       R+ 
Sbjct: 63  ELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARQG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               RAAR  L AQ+EAG L   ++T +A+ + L   P    DW   + S  YD      
Sbjct: 119 TFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPAPFHDWLTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++LAQ +
Sbjct: 179 RQKRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVLAQAK 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFHDAIGWLLGEEGEGIRHIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S   MR + + AI++A +R V G  LI+QP+M++ +  +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLGRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFSVCKSGMPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   ++E L     +  G        + +  
Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYEMLSEAFAEVKGQDRHYDRMVRQLQ 477

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T+++ L    A + R     +A  + +
Sbjct: 478 QRLRKPSEALGREITQQLFLLGCGAQMLRYASPPVAQAWCQ 518


>gi|300310313|ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073098|gb|ADJ62497.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 550

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 201/518 (38%), Positives = 286/518 (55%), Gaps = 16/518 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G N Y SD+ L   +    +  H   L   GE +     +E+A +AN +TP L
Sbjct: 8   NQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGGAEMREMAELANRHTPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D VEFHPAWH LL +    GLH   W    +P     AH  RAA  +L A
Sbjct: 68  HTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPW---MQPG--DGAHAARAAGYFLHA 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P + +    ++FSRE+D  +    QK S+ IG+G+TE
Sbjct: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182

Query: 205 KRGGTDI---AAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           K+GG+D+   A+I      ++DG    Y LSGHKWF S+PM DA +MLA+ E  + CF V
Sbjct: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCFFV 242

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR L DG+ N +  QRLK+K+GNRSN++ E+EF    G ++GD       + +M     L
Sbjct: 243 PRWLPDGTRNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHTRL 302

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G  L +QP+M+  +AD+AL+  AAT L  R+A+
Sbjct: 303 DCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRVAH 362

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +FD A     + A+ RI+ P  K+W CK       E ME  GG+GY+E   +AR YRE+P
Sbjct: 363 AFD-APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREAP 421

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSG-KKVITILRDSISLCKE 496
            NSI  GSGN M LDVL  + + T  L   L    +   G    ++ +  L+  ++  +E
Sbjct: 422 VNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPEE 481

Query: 497 DK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           ++   AR L +++ LA     + R      A  FLE+R
Sbjct: 482 EREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR 519


>gi|119716580|ref|YP_923545.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119537241|gb|ABL81858.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 557

 Score =  326 bits (835), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 197/531 (37%), Positives = 294/531 (55%), Gaps = 18/531 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMA 77
           SD   + NQPP  +G N  ++D  LV  +    S  V ++L  LG    +  A+E   +A
Sbjct: 3   SDIRASANQPPALVGHNVVTADLALVEAVTRHASADVVEDLAALGAEAGTDEAREHGLLA 62

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P+L  Y   G R D+VEFHP+WH L+ R++  GL  + W++  +      AH  RA
Sbjct: 63  NRNEPRLAPYDRYGNRIDEVEFHPSWHWLMGRAVGHGLAAAPWEQ--QEAGAPHAHVRRA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A     +  EAGH    S+T A++ AL     + K+W P + S  YDP  +    K    
Sbjct: 121 AGFMAWSHTEAGHGCPISMTYAAVPALRADEALAKEWTPLLASTTYDPGLRLATTKAGAL 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
            G+G+TEK+GG+D+    ++ +  S  G Y L GHKWF S+PM+D F++LAQ EG  + C
Sbjct: 181 AGMGMTEKQGGSDVRTNVTEARPTSAHGEYTLHGHKWFTSAPMNDMFLVLAQAEGSALTC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VPR+L DG+ N +   RLK+K+GNRSNA+ ELE   T G+ LGD       + +M   
Sbjct: 241 FVVPRVLADGTRNQMDVVRLKDKLGNRSNASSELELDGTVGYRLGDEGRGVRTIIEMVAA 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  + S S MR ++ EA  +A  R   G +L D+P+M+  +AD+A++  AATAL+ R
Sbjct: 301 TRLDCVLGSTSLMRRAVNEASWHAAHRTAFGALLADKPLMQNVLADLAVETEAATALAIR 360

Query: 376 LANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           LA + D     +A   + EAA+ RI  P+ K+W CK  P ++AEA+EC+GG+GY+E+  +
Sbjct: 361 LAAAVDGLGRPDAAEAAHEAAFRRIALPLAKFWVCKRTPFLVAEALECLGGNGYVEDSGM 420

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
              YRE+P NS+  GSGN   LDVL  L +   + +   + + +  G    ++   + D+
Sbjct: 421 PLLYREAPVNSVWEGSGNVNALDVLRALGREPEVLDAWITEVGRARGGD-ARLDRAIEDT 479

Query: 491 ISLCKEDKG-------LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           ++L     G        AR L  ++AL    A L R    ++ADVF  +R 
Sbjct: 480 LALIGSLLGDPDSLEVNARRLASRMALCLQGALLVRFAPPEVADVFCASRL 530


>gi|254776935|ref|ZP_05218451.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 542

 Score =  326 bits (835), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 191/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N   S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  ++   
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  AR + E I LA   + L R G   +A+ FL  R 
Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514


>gi|118466870|ref|YP_883634.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118168157|gb|ABK69054.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 542

 Score =  326 bits (835), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 191/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N   S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  ++   
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  AR + E I LA   + L R G   +A+ FL  R 
Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514


>gi|291303095|ref|YP_003514373.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572315|gb|ADD45280.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 542

 Score =  326 bits (835), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 186/481 (38%), Positives = 266/481 (55%), Gaps = 16/481 (3%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE + S  A   A  AN N P L  +   G R D+V+FHPAWH  +  S+  G H   W
Sbjct: 48  LGEVLGSGDAARWAEQANVNRPVLRTHDRYGNRVDEVDFHPAWHRFMALSVEFGCHAMPW 107

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
               +P  R  AH  RA    ++ Q+E GH    S+T AS+  L   P +   W P I S
Sbjct: 108 R---DP--RDGAHAARAVLFSMLGQIEPGHGCPISMTYASVPVLRANPELAAQWEPSITS 162

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             YDP  +    K  V +G+ +TEK+GG+D+ A  ++  ++ DG Y L GHKWF S+PM+
Sbjct: 163 TSYDPGLRPRQAKEGVLVGMAMTEKQGGSDVRANVTRATRLDDGTYALRGHKWFCSAPMN 222

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           DAF++LAQ EG + CFL+PR+L DGS N +  QRLK+K+GN +NA+ E+E  +   F +G
Sbjct: 223 DAFLVLAQAEGGLSCFLLPRVLPDGSRNAIRIQRLKDKLGNHANASSEIELHDAIAFPVG 282

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +M     LD  I + +GMR  +AEA  +A  R   G  LI+QP+M++ +A
Sbjct: 283 EEGRGVRTIIEMVNHTRLDCVIGTAAGMRQCVAEATWHAAHRSAFGKPLIEQPLMRQVLA 342

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ ++  AATA   RLA ++D    R EEAA+ R+   + KYW CK  P   AEA+EC+G
Sbjct: 343 DLCVESEAATATMMRLAAAYD----RPEEAAFRRLATAVAKYWVCKRGPGHAAEALECLG 398

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GY+EE  +AR YRE P  SI  GSGN + LD+L  +       E   +  E  L S  
Sbjct: 399 GNGYVEEAPLARRYREQPLMSIWEGSGNVVCLDILRAMRTDPETIEAFLN--EVGLASGA 456

Query: 481 KKV----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
            +     +  L+  ++    D+  AR L + +ALA   + L R   +++A  F   R  D
Sbjct: 457 DRAFDAHVAGLKRRLA-AGPDEASARLLADDLALALQGSLLLRHAPSEVAGAFTAARLGD 515

Query: 537 N 537
           N
Sbjct: 516 N 516


>gi|56460648|ref|YP_155929.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56179658|gb|AAV82380.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 559

 Score =  326 bits (835), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 195/538 (36%), Positives = 288/538 (53%), Gaps = 13/538 (2%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQP      N Y +D +L  A+     S  + +L   GE      + E    AN   P+L
Sbjct: 20  NQPTALENYNLYLADKALRKAVEREGASWAYSDLIAFGELAGKADSIEQGFQANKYQPEL 79

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D ++FHP +H L+  +I  GLH S W    EP  +  AH  RAA+ YL  
Sbjct: 80  RTHDRYGHRIDLIDFHPTYHQLMSTAIEHGLHASPWS---EP--KLGAHVARAAKYYLHT 134

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EA H    ++T AS+ AL   P + K+W PKI +R+YDP N    +K++V IG+ +TE
Sbjct: 135 QVEASHGCPITMTFASIPALRHQPDLFKEWGPKITARQYDPRNIPHTEKSAVTIGMAMTE 194

Query: 205 KRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GG+D+   +++    G++ S   Y L GHKWF+S+PM DAF++LAQ    + CFLVPR
Sbjct: 195 KQGGSDVRLNSTRAYPIGKEGSGQAYELVGHKWFVSAPMCDAFLVLAQTASGLSCFLVPR 254

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DGS N +  Q+LK K+GN +NA+ E E     G+++G+       + +M      D 
Sbjct: 255 WRPDGSKNPIQIQQLKQKMGNAANASSETELRGALGWMVGEEGKGVRTIIEMVATTRYDC 314

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S SGMR ++ +AIH+A  R   G  L +QP+M+  +AD+A++  AA     R+A + 
Sbjct: 315 MIGSSSGMRQAVVQAIHHASHREAFGTKLSEQPLMQNLLADLAIESEAAMTYMMRIARAM 374

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    E   +RI  PI KYW CK  P    EAME IGGSG +E   + R +RESP N
Sbjct: 375 DN-QDDEHEKLLSRIATPIGKYWICKRTPNHAYEAMEVIGGSGVMENHIMPRLFRESPVN 433

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--K 498
           +I  GSGN   LDVL  +EK   + +  F+ L++  G+  +    I+R        +  +
Sbjct: 434 AIWEGSGNIQCLDVLRAIEKQPEVLDVYFAELQRAQGADKRLDQFIMRLKSEFTDRNMLQ 493

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
             AR +T+ +A+   AA L +    D+AD F  +R   +    +  L    N A I++
Sbjct: 494 YRARSITDSMAVGLQAALLVQHAGTDVADAFCASRLAASTGLNYGTLPTGLNCAAIVE 551


>gi|116052012|ref|YP_789145.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587233|gb|ABJ13248.1| possible acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 549

 Score =  325 bits (834), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +HQ +++    NQ P   G N Y  D  L      +     +E L+  GE +        
Sbjct: 3   LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWGRRYQGGWAEERLQRYGE-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W    +P  R  A 
Sbjct: 62  GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    QK
Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA  
Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE  
Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L+
Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D 
Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524


>gi|170719826|ref|YP_001747514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169757829|gb|ACA71145.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 559

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/533 (37%), Positives = 291/533 (54%), Gaps = 14/533 (2%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66
           + L MN +HQ +++    NQPP   G N Y  D  L      F +      +++ G  + 
Sbjct: 6   QELPMN-LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDVYGA-LA 63

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
                    +AN + P   ++   G R D VEFHPA+H L+R ++  GL    W    EP
Sbjct: 64  GGPLMAAGFLANTHKPAFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP 120

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R  AH  RA+  YL +Q EAG     ++T A++ AL   P + + W PKIF+REYDP 
Sbjct: 121 --RPGAHVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKIFAREYDPR 178

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDA 242
           N     K  V IG+ +TEK+GGTD+ A T++    G      +Y L GHKWF S+PM DA
Sbjct: 179 NVGDQHKAGVTIGMAMTEKQGGTDVRANTTRAYPVGSPGPGQVYELVGHKWFCSAPMCDA 238

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+ LAQ +  + CFL+PR   D S N    QRLKNK+GN SNA+ E+EF     +++G+ 
Sbjct: 239 FLTLAQTDKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMVGEE 298

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+
Sbjct: 299 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQATHHCAHRKVGGRVLSEQPLMQNVLADL 358

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AA ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+
Sbjct: 359 ALESEAALALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGA 417

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY+E+  + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G     
Sbjct: 418 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLA 477

Query: 483 V-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             I  L+ + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R 
Sbjct: 478 AHIGNLKGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNTSVSDAFIGSRL 530


>gi|254822769|ref|ZP_05227770.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 542

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  +S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLEDHNPATSAVLIEALIREGGQWGLDEVNEVGALSASREAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGHRIDEVEYDPAYHELMRAAITHGMHAAPWADE-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + + + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRYNPELAQVYEPLLTSREYDPELRPATAKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L GHKWF S+PM D F++LAQ  G + CF++
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGSRNRMFLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A    E EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDETEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  + +  G   +    +  LR  ++  +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDEIAESAGQDPRLGNHVARLRADLASLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                 R + E I LA   + L R G   +A+ FL  R 
Sbjct: 476 TIAYRGRKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514


>gi|240167672|ref|ZP_04746331.1| acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 542

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/518 (36%), Positives = 276/518 (53%), Gaps = 9/518 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+    NQ P     N+ +S  L+ ALI         E+  LG       AQ    +A+ 
Sbjct: 3   DTHVVTNQVPPLENHNSATSPMLVEALIREGGQWGLDEVNELGAISGGHEAQRWGELADR 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA+
Sbjct: 63  NRPVLHTHDRVGHRIDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    E GH+   S+T A + AL   P +   + P + SREYDP  K    K  +  G
Sbjct: 118 ASVWTP-EPGHVCPISMTYAVVPALRHNPELASVYEPLLTSREYDPEFKLATTKRGITAG 176

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T++     DG Y L+GHKWF S+PM D F++LAQ    + CF++P
Sbjct: 177 MSMTEKQGGSDVRAGTTEATPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPKGLSCFMLP 236

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD
Sbjct: 237 RILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRLD 296

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A +
Sbjct: 297 CTLGSATSMRTGLTRAIHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAGA 356

Query: 380 FDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D  A+   +EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+P
Sbjct: 357 TDNAARGDLKEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREAP 416

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
              I  GSGN   LD L  +       E LF  L Q  G   +    +  LR+ +     
Sbjct: 417 LMGIWEGSGNVSALDTLRAMATRPECVEVLFDDLAQSAGQDARLDGHVERLREQLGDLDT 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR + E I LA   + L R G   +A+ FL  R 
Sbjct: 477 IQYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 514


>gi|291441087|ref|ZP_06580477.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343982|gb|EFE70938.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 467

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 178/437 (40%), Positives = 249/437 (56%), Gaps = 7/437 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQP      +A     LL  L         ++L  LG    S   QE +  AN + P+L 
Sbjct: 25  NQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSEQANRHEPELR 84

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHP+WH L+R ++ +GL  + W        R  AH  R A   +   
Sbjct: 85  THDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVARTAGGLVWGH 139

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A++  L   P + K + P + SREY+P  + P +K  +  G+G+TEK
Sbjct: 140 TDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRGLLAGMGMTEK 199

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVPR+L D
Sbjct: 200 QGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 259

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD  +MS
Sbjct: 260 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 319

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA + D A 
Sbjct: 320 AALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 379

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P  SI 
Sbjct: 380 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 439

Query: 444 LGSGNAMVLDVLNLLEK 460
            GSGN   LDVL  L +
Sbjct: 440 EGSGNVNALDVLRALGR 456


>gi|53717865|ref|YP_106851.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126454819|ref|YP_001064510.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242314916|ref|ZP_04813932.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254295768|ref|ZP_04963225.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|52208279|emb|CAH34211.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126228461|gb|ABN92001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|157805690|gb|EDO82860.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|242138155|gb|EES24557.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 559

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 199/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  +  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--QPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN M +DVL  +E+  +    LF         S      +  L   +SL 
Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488

Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E +   AR + ++IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536


>gi|118472712|ref|YP_885773.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173999|gb|ABK74895.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 551

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 282/535 (52%), Gaps = 11/535 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P     N  +S  L  ALI         E+  LG    S  AQ    +A+ N P LH
Sbjct: 18  NQVPPLEDYNPATSPVLTEALIREGGEWGLDEVHALGALSGSRQAQRWGELADRNRPILH 77

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH +RAA+  +   
Sbjct: 78  THDRYGHRIDEVEYDPAYHELMSVAVSYGLHAAPWADD-----RPGAHVVRAAKTSVWTP 132

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            E GH+   S+T A + AL   P + K + P + SR YDP  K P  K  +  G+ +TEK
Sbjct: 133 -EPGHICPISMTYAVVPALRFNPELAKIYEPLLTSRVYDPELKIPTTKLGITAGMSMTEK 191

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR+L DG
Sbjct: 192 QGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD  + S 
Sbjct: 252 RRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + MR  L+ A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A + D+A  
Sbjct: 312 TSMRNGLSRAVHHAQHRKAFGAYLIDQPLMRNVLADLAIEAEAATMLAMRMAGATDKAVH 371

Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             E E    RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P   I  
Sbjct: 372 GDEREKLLRRIGLAAGKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKEDKGLA 501
           GSGN   LD L  +       E LF  L Q  G   +    V T+ RD +   +  +  A
Sbjct: 432 GSGNVSALDTLRAMATRPECVEVLFDELGQTAGHDERLDAHVATLQRD-LGELETIQYRA 490

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E I+LA   + L R G   +A+ FL +R      S    L    + A II+
Sbjct: 491 RKVAEDISLALQGSLLVRHGHPAVAEAFLASRLGGQWGSAFGTLPTGLDLAPIIE 545


>gi|186477672|ref|YP_001859142.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194131|gb|ACC72096.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 557

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 200/524 (38%), Positives = 288/524 (54%), Gaps = 17/524 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N ++SD+ L A +    +  H+E L   G  + +     LA +AN +TP+L
Sbjct: 14  NQAPPLANYNLFTSDAALAAAVEREGAAWHREALTRDGAALTTPEILALAELANRHTPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+ P GER D +EFHPAWH LL     +GLH   +    +P  +  A   R A  +L A
Sbjct: 74  AAFSPRGERIDALEFHPAWHTLLGLLRREGLHALPFS---DP--QPGAMVARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K++SRE+DP +    QKTS+ IG+G+TE
Sbjct: 129 QLESGSLCPVTMTFASIPVLQREPGLFATLRDKLYSREHDPRDLPLEQKTSMMIGMGMTE 188

Query: 205 KRGGTDI-----AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257
           K+GG+D+      A  + G     G Y L GHKWF S+P  DA ++LA+     G  CF 
Sbjct: 189 KQGGSDVRSNRTQAFAASGSGRGAG-YRLVGHKWFFSAPQCDAHLVLARTGDHEGLSCFF 247

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD       + +M     
Sbjct: 248 VPRFAPDGSKNAVRIQRLKDKLGNRSNASSEVEFFDAWGIMIGDEGRGVPTIIEMANYTR 307

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+  AAT L  RLA
Sbjct: 308 LDCVIGSAALMRAALVQAIHHARHRSAFGKHLADQPLMRNVLADLALESEAATVLFMRLA 367

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +F++  +  EE A+ R++ P  KYW CK       EAME  GG+GY+EE  +AR YRE+
Sbjct: 368 RAFEDMTNAPEERAWRRLVTPAAKYWVCKRTLEFTGEAMEVWGGNGYVEEGPMARFYREA 427

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISLC 494
           P NSI  GSGN M LDVL  +E+     + L +      Q   +    +  +   S S  
Sbjct: 428 PVNSIWEGSGNVMCLDVLRAMEREPGAAQALLAAWRAHAQAHPALNAALDRLTAASTSAP 487

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           +  +  AR + ++I L + A  L +   + +AD ++  R  + C
Sbjct: 488 ETREVSARRIAQQIVLIAQAVLLVQHAPSFVADAYIATRLGEGC 531


>gi|332308244|ref|YP_004436095.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175573|gb|AEE24827.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 549

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 188/515 (36%), Positives = 280/515 (54%), Gaps = 8/515 (1%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQP +    N ++ DSLL  A+  N      + LE  G +V+     +    AN + P  
Sbjct: 14  NQPEIMSPYNLWTCDSLLQTAVKLNGGQHAEQTLENYG-HVVGHQLMDAGEQANRHKPIF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D VEFHPA+H L+  ++   +H   W    +    K AH +RAA +++  
Sbjct: 73  QPFDRYGRRTDTVEFHPAYHELMTAAMQAQVHAYSWRNPSQ----KGAHVVRAALMFMHY 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q +AG     ++T A++  L  +P     W  K+ + EYDP      +K  + +G+G+TE
Sbjct: 129 QADAGTSCPLTMTHAAVAVLNQSPNFPAFWTQKLINGEYDPRALPAEKKHGITLGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+   T+Q  K  DG Y + GHK+F S+P+ DA ++LAQ E  + CFL+PR+L D
Sbjct: 189 KQGGSDVRRNTTQAIKQPDGNYHVIGHKFFFSAPLCDAHLILAQTENGLTCFLLPRILPD 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD  I S
Sbjct: 249 GQLNQVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGQGVKMIIDMVSLTRLDCMIGS 308

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR +L +A+H+ + R   G  LIDQP+MK  +AD+ L++AA+ AL+ R+A + D A 
Sbjct: 309 TALMRQALVQALHHTQNREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVAKAVDLAS 368

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   EA ++RI   I KYW CK  PA + EA EC+GG GY+EE  + R YR++P NSI  
Sbjct: 369 SNKHEAGFSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENVMPRLYRQAPLNSIWE 428

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502
           GS N   LDVL  L K   +   LF  L    G +    + +  L+ + +  +  +  +R
Sbjct: 429 GSANVQCLDVLRALRKEPEVKTALFDELSTAAGKNSYYDQHLVALKHAFNEPETLEVRSR 488

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            + EK+AL    A L      D+AD F   R   N
Sbjct: 489 LVVEKMALGLQGALLLNGDDKDLADTFCHARLGGN 523


>gi|311742200|ref|ZP_07716010.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314693|gb|EFQ84600.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 545

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 288/534 (53%), Gaps = 8/534 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  +  +A        A      +    EL  +G    S  +QEL  +A  + P LH
Sbjct: 9   NQVPPLVDYDAADYAPYTEAFTRVGATGALDELSAIGRDAGSAASQELGDLAERHEPVLH 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V + P++H L+ R+   GLH + W  + +P     AH  RAA L +  Q
Sbjct: 69  THDRYGHRIDRVVYDPSYHQLMTRATGYGLHGTPW-VTGDP----HAHLRRAAGLSVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           ++AGH    S+T A++ AL   P +   + P + +  YDP+  AP  K  +  G+ +TEK
Sbjct: 124 VDAGHQCPISMTYAAVPALRVDPELAARFEPLLATTVYDPSFAAPETKAGLTAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+   + +DG Y L+GHKWF S+PMSD  + LAQ  G + CF+VPR+L DG
Sbjct: 184 QGGSDVRANTTHATEQADGTYRLTGHKWFTSAPMSDILLTLAQAPGGLTCFVVPRVLPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + N +  QRLK+K+GNRSNA+ E+E+   FG+ LGD       + +M  +  LD  I S 
Sbjct: 244 TTNRVALQRLKDKLGNRSNASSEVEYDQAFGWRLGDEGRGVRTIIEMVNMTRLDCTIGSA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           SGMRV +  A+H+A  R   G  L+DQP+M+  +AD+A++  A++ ++  LA+  D A +
Sbjct: 304 SGMRVGVQAAVHHATHRSAFGAALVDQPLMRNVLADLAVEAEASSTVAMWLADLTDRALA 363

Query: 386 RSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             E AA   RI   ++KY+ CK  P   AEA+EC+GG+GYIE+  + R YRE+P  S+  
Sbjct: 364 GDERAADLRRISLAVSKYYVCKRGPVHAAEALECLGGNGYIEDSRMPRLYREAPLMSVWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + K       LF  L+   G+  +       L+D  +     +  AR
Sbjct: 424 GSGNVAALDTLRAVAKQPATLTALFDELDSVAGAEPRLDAFARRLKDQFTDPASAELRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +   +A+A  A+ L R G   ++D F  +R   +  +    L    + A II+
Sbjct: 484 RIVGDLAIALQASLLVRFGHPAVSDAFAASRLDRDWGTVFGTLPAGLDLAPIIE 537


>gi|300899726|ref|ZP_07117951.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1]
 gi|300356698|gb|EFJ72568.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1]
          Length = 546

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+M  L+   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|297561763|ref|YP_003680737.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846211|gb|ADH68231.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 543

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 186/520 (35%), Positives = 282/520 (54%), Gaps = 10/520 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           P+  +F  NQ P      A    +L+  L          E+  +G+   S   +     A
Sbjct: 3   PTHEVF--NQAPPLGDYAAAEDPALVEGLRREGAGWAEAEVREVGDAAGSERVRAWGESA 60

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P L  +   G R D+V++ PA+H L+ +++  G+H + W        R  AH  RA
Sbjct: 61  NAYPPVLRTHDRYGHRVDEVDYQPAYHVLMDQAVEHGMHAAPWADG-----RPGAHVARA 115

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ +L +Q EAGH    S+T A++ AL  +P + + + P + +  YD   +AP  K  + 
Sbjct: 116 AKFFLWSQPEAGHGCPVSMTYAAVPALRHSPELARRYEPLLTAPVYDFGLRAPHTKRGLL 175

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+ +TEK+GG+D+ A T++    ++G + L+GHKWF S+PMSD F+ LAQ    + CFL
Sbjct: 176 AGMSMTEKQGGSDVRANTTRAVPTAEGHHVLTGHKWFTSAPMSDFFLTLAQAPEGLSCFL 235

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+LEDG  N L  QRLK+K+GNRSNA+ ELE+      L+G+       + +M     
Sbjct: 236 VPRVLEDGGRNALHIQRLKDKLGNRSNASAELEYDGAVAHLVGEPGRGVPTIIEMVNSTR 295

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I S +GMR ++  A+H+A  R   GG+L++QP+M+  +AD+AL+  AATAL  RLA
Sbjct: 296 LDCVIGSAAGMRAAVVHALHHAEHRSAFGGVLVEQPLMRNVLADLALESEAATALMTRLA 355

Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A    E EAA+ R+   + K+W  K  PA  AEA+EC+GG+GY+EE  + R +R+
Sbjct: 356 GAVDRAVRGDETEAAFRRLGVAVGKFWVTKRQPAHAAEALECLGGNGYVEESGMPRLFRD 415

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
           SP NS+  GSGN   LDVL  + +     E   + L    G        +  L  ++   
Sbjct: 416 SPLNSVWEGSGNVAALDVLRAMGRSPESLEAFLAELRAAAGVDDHYDAAVKRLEQALGDP 475

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +E +  AR + E +AL   A+ L R     +A+ F  +R 
Sbjct: 476 EEAQYRARTVVELMALVLQASVLLRHAPTPVAEAFTASRL 515


>gi|239815892|ref|YP_002944802.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802469|gb|ACS19536.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 546

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 179/445 (40%), Positives = 262/445 (58%), Gaps = 14/445 (3%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP   +G N + ++  L  AL  N PS+   +L  LG  + S   Q  AR+AN + P+
Sbjct: 8   FNQPEPLVGYNLFETNRPLRDALKFNAPSLQLAQLSELGATIGSAEMQAHARLANTHPPE 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   G R D+VEFHP++H L+  ++  GLH + W  +        +H +RAA   L 
Sbjct: 68  LHTHDRFGRRIDEVEFHPSYHVLMAAAVGAGLHGTPWTGT-----SASSHVLRAAGFMLF 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +LE   L   S+T A+  AL +   V+ DW PK+ S  YDP   +   K  V +G+G+T
Sbjct: 123 TELEPSILCPVSMTYAATPALRSNAVVYADWGPKLGSLWYDPALASFKDKPGVTMGMGMT 182

Query: 204 EKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T+Q    G       Y ++GHKWF S+PM DAF++LAQ    + CF +P
Sbjct: 183 EKQGGSDVRANTTQAVRGGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSCFFLP 242

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DGS N +  QRLK+K+GN++NA+ E+EF     +L+G+       + +M  +  LD
Sbjct: 243 RVLPDGSRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTMTRLD 302

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ +   MR +L  A+++A +R   G  LI QP+MK  +AD+AL+  A+TAL+ RLA +
Sbjct: 303 CALGTSGLMRQALGIALNHASQRMAFGKPLIGQPLMKNVLADLALESEASTALAIRLARA 362

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRE 436
           FD+ ++   E   AR++ P+ K+W CK       EAMEC+GG+GY+EE     +AR YRE
Sbjct: 363 FDQ-QADEHERLMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMARIYRE 421

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
            P NSI  G+GN M LD+L  L KG
Sbjct: 422 MPLNSIWEGAGNIMALDLLRGLRKG 446


>gi|301024538|ref|ZP_07188213.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1]
 gi|300396537|gb|EFJ80075.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1]
          Length = 546

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+M  L+   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|294632084|ref|ZP_06710644.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835417|gb|EFF93766.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 544

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 193/543 (35%), Positives = 289/543 (53%), Gaps = 26/543 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPP   G + +++D  L   +     A     V  EL  LG    S   QE    AN N
Sbjct: 10  NQPPPLSGYDVFTADRALTEAVDRHVGAGLLDEVRGELAGLGRAAGSAQLQEWGAQANEN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V+FHPAWH LL + +  GL  + W+R          H  RAA  
Sbjct: 70  PPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGL-TAAWNRP-------AGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG+    S+T A++ AL   P +  +W P++ S  YD   +    K     G+
Sbjct: 122 LVWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSMVYDRELRPAHLKPGALFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            +TEK+GG+D+ A T+  + +++ G Y L+GHKWF S+PMSDAF++LAQ    + CFLVP
Sbjct: 182 AMTEKQGGSDVRANTTAARPLAESGAYELTGHKWFCSAPMSDAFLVLAQAPAGLTCFLVP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     LD
Sbjct: 242 RVLPDGARNVFRVQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 302 CVLGSAGLMRQAVAQAVHHCAYREAFGGRLLDKPLMRNVLADLALESEAATTLALRLAAA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+     +E A  RI  P  KYW  K    +  EA EC+GG+GY+EE  + R  RESP 
Sbjct: 362 CDDGG--EQERALLRIAVPAAKYWVTKRCAPLAVEASECLGGNGYVEESGLPRLVRESPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493
           NSI  G+GN   LDVL  L +    F+     +      +  L ++ K ++T L D   +
Sbjct: 420 NSIWEGAGNVQALDVLRALRREPGAFDAYLREVGLARGADHRLDAAIKDLLTELADLAGV 479

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
               +  AR L E++AL    + L R    ++AD F  +R   +  ++   L    + A 
Sbjct: 480 ----EARARRLVERLALVLQGSLLVRYAPPEVADAFCASRLGGDRGASFGTLPHTLDLAS 535

Query: 554 IID 556
           +++
Sbjct: 536 VVE 538


>gi|296136192|ref|YP_003643434.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295796314|gb|ADG31104.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 543

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 203/514 (39%), Positives = 284/514 (55%), Gaps = 13/514 (2%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N +++D +L  AL         ++L   G  + +  + E  R+AN NTP L
Sbjct: 10  NQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGAAASYEQGRLANQNTPVL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           HA+   G R D++EFHPAWHAL+      GLH   W +      +  AH  RAA   L  
Sbjct: 70  HAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWAQP-----QPGAHVARAAGFILQT 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG +   ++T  ++ A+     + +DW P +   EYDP +    QK    IG+G+TE
Sbjct: 125 QIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPLAQKRGGLIGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ + T++ +    G Y L+GHKWF S+P  DA ++LAQ  G + CF VPR   D
Sbjct: 185 KQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGLSCFFVPRWAPD 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N +  QRLK+K+GNRSNA+ E+EF   +G LLG+       + +M     LD  + +
Sbjct: 245 GSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMGTYTRLDCVLGT 304

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR +L++A+HYAR R   G  LIDQP+M+  +AD+AL++ AA AL+ RLA +FD   
Sbjct: 305 TGLMRQALSQAVHYARHRLAFGAALIDQPLMRNVLADMALEVEAAIALALRLAQAFD--- 361

Query: 385 SRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           S+ +EA     R++ P  K+  CK    + AEAME +GG+GY+EE   AR YRE P NSI
Sbjct: 362 SQHDEAQLLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDVQARIYREMPVNSI 421

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGL 500
             GSGN M LDVL  L K     + L + L Q  G +      + R S +L   D  +  
Sbjct: 422 WEGSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSAALRDTDAQQSR 481

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           AR LT  + LA  AA L R     IA  F  +R 
Sbjct: 482 ARALTHDLVLALQAALLLRHAPEPIAQAFCASRL 515


>gi|318061297|ref|ZP_07980018.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318080613|ref|ZP_07987945.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 533

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 268/482 (55%), Gaps = 12/482 (2%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           EL  LG    S  AQE    AN N P+L  +   G R D+VEFHPAWH LL  ++  GL 
Sbjct: 31  ELSELGRAAGSAQAQEWGAQANENPPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL- 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            S W        R   H  RAA      Q EAGH    S+T A++ AL   P +  +W P
Sbjct: 90  TSAW-------ARPGGHVRRAAGFLTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEP 142

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFL 235
            + SR YD   +    K     G+G+TEK+GG+D+ A T++   ++ DG + L+GHKWF 
Sbjct: 143 LLTSRVYDEGLRPASAKAGALFGMGMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFC 202

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           S+P+SD F++L Q  G + CFLVPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+
Sbjct: 203 SAPVSDGFLVLGQAPGGLSCFLVPRVLADGERNVFAIQRLKDKLGNRSNASAEVEFDGTW 262

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G+       + +M     LD A+ S + MR ++A+AIH+A  R   GG L+ +P+M
Sbjct: 263 ARLVGEEGRGVRTIIEMVSATRLDCALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLM 322

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAE 414
              +AD+AL+  AAT L+ RLA ++D A +  E E A  R+  P+ KYW  K    V+AE
Sbjct: 323 SNVLADLALESEAATTLALRLAAAYDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVAE 382

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A+EC+GG+GY+EE  + R  RESP NS+  GSGN   LDVL  L++     +     L  
Sbjct: 383 ALECLGGNGYVEESGLPRLLRESPLNSLWEGSGNVQALDVLRALQREPGALDAFLGELGA 442

Query: 475 DLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
             G+  +    +  L   ++  +  +  AR L E++AL    + L R    ++AD F  +
Sbjct: 443 ARGADHRLDAAVKHLFQELADLEGIEARARRLVERMALVLQGSLLVRFAPPEVADAFCAS 502

Query: 533 RF 534
           R 
Sbjct: 503 RL 504


>gi|330811901|ref|YP_004356363.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380009|gb|AEA71359.1| Putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 549

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 194/528 (36%), Positives = 281/528 (53%), Gaps = 17/528 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G  +      E 
Sbjct: 3   LHQFAETHDVTNQPPSLDGANLYRIDLPLQQWSQRFGAGWAQARIDAYGA-LAGGPLMEA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P   ++   G R D VEFHPA+H L+R ++  GL    W        +  AH
Sbjct: 62  GFLANQNKPVFSSHDRYGHRIDLVEFHPAYHQLMRTAVEHGLPSLPWAHP-----QPGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T AS+ AL   P + + W PK+ + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFASVPALRLQPDLAEHWVPKVLATEYDPRNVGMAHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  +A
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESESA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + D       EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGRALDHLND-EHEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITI 486
           + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G   K++   I  
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGMLEVLFRELGD--GHGDKRLAGHIHQ 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L  +     + +  AR LTE IA+   A  L  AG ++++D F+ +R 
Sbjct: 474 LHAAFKDTDDIQYRARQLTEDIAVGLQAKLLLEAGNSEVSDAFIASRL 521


>gi|293407914|ref|ZP_06651754.1| isovaleryl CoA dehydrogenase [Escherichia coli B354]
 gi|291472165|gb|EFF14647.1| isovaleryl CoA dehydrogenase [Escherichia coli B354]
          Length = 547

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+M  L+   P   +DW   + S  YD      
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 418 PRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 518


>gi|218702884|ref|YP_002410513.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39]
 gi|218372870|emb|CAR20750.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39]
          Length = 541

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|146310030|ref|YP_001175104.1| isovaleryl CoA dehydrogenase [Enterobacter sp. 638]
 gi|145316906|gb|ABP59053.1| acyl-CoA dehydrogenase domain protein [Enterobacter sp. 638]
          Length = 540

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 194/517 (37%), Positives = 284/517 (54%), Gaps = 9/517 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD +L  A+I        + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPLPLSNSNLFLSDCALRDAVIREGAEWDIELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   GER D V FHPAWH L++    + +H   W    E   R+ + 
Sbjct: 59  GRLANANPPELLRYNAAGERLDDVRFHPAWHLLMQGLCANRVHNLAW----EDQARRGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L  + P+   DW   + S  YDP      Q
Sbjct: 115 VARAARFILHAQVEAGTLCPVTMTFAATPLLQQSLPKPFHDWLTPLMSDRYDPHIAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKCSDGSYRLVGHKWFYSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR+L DG  N +  +RLK+K+GNRSNA+ E EF    G++LG+       +  M
Sbjct: 235 LSCFFVPRILPDGQRNAVRLERLKDKLGNRSNASSEAEFMEASGWILGEEGEGVRQILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  +D A+ S   MR +L+ A+++A +R   G  L+DQP+M+  ++ +AL +   TAL
Sbjct: 295 GGLTRVDCALGSHGLMRRALSVALYHAHQRQTFGKNLVDQPLMREVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D+ +   +E A+AR+  P  KY  CK     +AEAME +GG+GY EE  + R
Sbjct: 355 LFRLARAWDQ-RQDPKETAWARLFTPAAKYSVCKAGIPFVAEAMEVLGGAGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   + + L     Q  G       +  +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPAILDVLQEDFAQVKGQDRHFDRSWRQLQQK 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           L K  +   R +T+ I L  + A + R     +A  +
Sbjct: 474 LRKPQESQGREITQLIFLLGAGAQMLRHASPPVAQAW 510


>gi|215489531|ref|YP_002331962.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215267603|emb|CAS12058.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 541

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 189/507 (37%), Positives = 278/507 (54%), Gaps = 9/507 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R +T ++ L    A + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500


>gi|319793833|ref|YP_004155473.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315596296|gb|ADU37362.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 546

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 193/525 (36%), Positives = 292/525 (55%), Gaps = 28/525 (5%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + ++  L  AL  N P +    L+ LG  + S   Q  AR+AN +TP+
Sbjct: 8   FNQPAPLADYNLFETNRPLRDALKFNAPQLQVAPLQELGVTIGSAEMQTHARLANIHTPE 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   G R D+VEFHP++H L+  ++  GLH + W  +         H +RAA   L 
Sbjct: 68  LHTHDRFGRRIDEVEFHPSYHVLMSAAVGAGLHGTPWAGT-----SASPHVLRAAGFMLF 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +LE   L   S++ A   AL +   V+ DW PK+ S  YDP  K+   K  V +G+G+T
Sbjct: 123 TELEPSMLCPISMSYAVTPALRSNAAVYADWGPKLTSLWYDPALKSFKDKPGVTMGMGMT 182

Query: 204 EKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           EK+GG+D+ A T+Q   + DG       Y ++GHKWF S+PM DAF++LAQ    + CF 
Sbjct: 183 EKQGGSDVRANTTQA--VRDGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSCFF 240

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR+L DG+ N +  QRLK+K+GN++NA+ E+EF     +L+G+       + +M  +  
Sbjct: 241 LPRVLPDGTRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTMTR 300

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ +   MR +L+ AI++A +R+  G  LI+QP+MK  +AD+AL+  A+TAL+ RLA
Sbjct: 301 LDCALGTSGLMRQALSIAINHASQRNAFGKPLIEQPLMKNVLADLALESEASTALAIRLA 360

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHY 434
            +FD      E    AR++ P+ K+W CK       EAMEC+GG+GY+EE     +AR Y
Sbjct: 361 RAFDYPDDEHER-LMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMARVY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  G+GN M LD+L  L KG  +     + L ++L  +  +   + R + +L 
Sbjct: 420 REMPLNSIWEGAGNIMALDLLRGLRKGDAV-----AALTKELAPARGQHAALDRLADALP 474

Query: 495 KEDKGL-----ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              + +     AR L + +ALA  A+ L +     +   F  +R 
Sbjct: 475 ARIEAMASEVEARRLAQDVALAVQASLLAQTAPPAVVGAFCASRL 519


>gi|309796998|ref|ZP_07691398.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7]
 gi|308119411|gb|EFO56673.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7]
          Length = 546

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|86739085|ref|YP_479485.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86565947|gb|ABD09756.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 561

 Score =  322 bits (826), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 196/511 (38%), Positives = 285/511 (55%), Gaps = 8/511 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP  +G +A +  +LL AL          +L  LG    S  A   A  AN   PQL 
Sbjct: 26  NQPPPLVGHDAAADPALLAALAREGAGWHMDDLHRLGRLAGSEEAARQADEANRFPPQLR 85

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V+FHP+WHAL+  ++ +GL  + W    +P  R  AH  RAA + +   
Sbjct: 86  THDRYGFRVDEVDFHPSWHALMEVAVREGLAGAPW---ADP--RPGAHVARAADILVWGT 140

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GHL   S+T A + AL   P +   + P + SR YDP  + P  K  +  G+G+TEK
Sbjct: 141 VEQGHLCPVSMTYAVVPALRAAPELAARYEPLLTSRVYDPGLRPPEGKAGLLAGMGMTEK 200

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+      DG Y L GHKWF S+PM+D F++LAQ  G + CF VPR+L DG
Sbjct: 201 QGGSDVRANTTTATPAGDGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFWVPRVLPDG 260

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N     RLK+K+GNRSNA+ E EF +T G+L+G+       + +M  +  LDS++ S 
Sbjct: 261 VRNTFRIARLKDKLGNRSNASGEPEFDDTVGWLVGEEGAGVRAIIEMVAMTRLDSSLGSA 320

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384
           +GMR ++  A H+ R R   G  LID P+M+  +AD+AL+  AAT L  R+A + D  A+
Sbjct: 321 AGMRAAVMAAAHHVRHRRAFGRPLIDAPLMRNVLADLALESEAATTLVLRVAGAVDRAAR 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E A+ R+   + KYW CK +PA+ AEA+EC+GG+GY+EE  + R YRE+P N I  
Sbjct: 381 GDRQEQAFGRLAIAVAKYWVCKRSPALAAEALECLGGNGYVEESGMPRLYREAPLNGIWE 440

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  L +    F    + ++   G+  +       LR  +   K+ +  AR
Sbjct: 441 GSGNVNALDVLRALTREPASFAAFATEIDAARGADRRLDAAWARLRAVLDRSKDAEFAAR 500

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENR 533
            + E++A+    + L R   + +AD F   R
Sbjct: 501 RIVERLAVVLQGSLLVRYAPSAVADAFCATR 531


>gi|15804776|ref|NP_290817.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|162139725|ref|NP_313190.3| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. Sakai]
 gi|291285599|ref|YP_003502417.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
 gi|12519175|gb|AAG59383.1|AE005651_12 putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7
           str. EDL933]
 gi|13364640|dbj|BAB38586.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7
           str. Sakai]
 gi|209750138|gb|ACI73376.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750140|gb|ACI73377.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750142|gb|ACI73378.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750144|gb|ACI73379.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750146|gb|ACI73380.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|290765472|gb|ADD59433.1| Putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
          Length = 546

 Score =  322 bits (826), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|331656015|ref|ZP_08357003.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
 gi|331046369|gb|EGI18459.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
          Length = 546

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGAYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|218707798|ref|YP_002415317.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026]
 gi|293402814|ref|ZP_06646911.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|298378344|ref|ZP_06988228.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|331665851|ref|ZP_08366745.1| protein AidB [Escherichia coli TA143]
 gi|218434895|emb|CAR15833.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026]
 gi|291429729|gb|EFF02743.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|298280678|gb|EFI22179.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|331056902|gb|EGI28896.1| protein AidB [Escherichia coli TA143]
          Length = 541

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+M + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|315299068|gb|EFU58322.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 16-3]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 283/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   + +  +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|324005250|gb|EGB74469.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 57-2]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R +T ++ L    A + +
Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLK 505


>gi|324019365|gb|EGB88584.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 117-3]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|117626533|ref|YP_859856.1| isovaleryl CoA dehydrogenase [Escherichia coli APEC O1]
 gi|115515657|gb|ABJ03732.1| putative acyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|315288468|gb|EFU47866.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 110-3]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             L K  + L R +T ++ L    A + +     +A  +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 515


>gi|328885969|emb|CCA59208.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 545

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/519 (36%), Positives = 281/519 (54%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQ P  +G + ++SD  L       L     + V  +L +LG    S   QE    AN N
Sbjct: 10  NQAPPLVGHDVFTSDRALAEAVERHLAPELLTEVRGDLTVLGRAAGSAQLQEWGERANAN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEF PAWH LL +S+  GL    W R          H  RAA  
Sbjct: 70  PPRLRTHDRYGHRIDEVEFDPAWHRLLGKSVEAGL-TDAWGR-------PGGHVRRAAGF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +++Q+EAGH    S+T A++ AL   P + + W P   S  Y+       +K  V +G+
Sbjct: 122 LVVSQVEAGHGCPLSMTHAAVPALRAEPELAEVWEPAALSHVYERELGPVAEKPGVLLGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            +TEK+GG+D+ A T++ + ++ DG Y L+GHKWF S+PMSDAF++LAQ    + CFL+P
Sbjct: 182 AMTEKQGGSDVRANTTEARPLAADGEYVLTGHKWFCSAPMSDAFLVLAQAPAGLTCFLLP 241

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-SNTFGFLLGDLNVSTGPVEDMKILIYL 318
           R+L DGS N    QRLK+K+GNRSNA+ E+EF   T+   +G+       +  M     +
Sbjct: 242 RVLADGSRNAFAIQRLKDKLGNRSNASAEVEFDGTTWARRVGEEGRGLRVIMGMVAATRV 301

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR ++A+A+H+   R   GG L ++P+M+  +AD+AL+  AAT L  RLA 
Sbjct: 302 DCVLGSAALMRQAVAQAVHHCAHREAFGGPLAEKPLMRNVLADLALESEAATVLGMRLAA 361

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++D      +E A  RI  P  KYW  K    V+AEA+EC+GG+GY+EE  + R  RESP
Sbjct: 362 AYDTGT--PQELALLRIAVPAAKYWVTKRCTPVVAEALECLGGNGYVEESGMPRLLRESP 419

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            NS+  GSGN   LDV+  L       +     +    G+   ++   +R  ++   + +
Sbjct: 420 LNSVWEGSGNVQALDVVRALRTEPAALDAFLREVGAARGAD-HRLDRAIRGVLTELADLE 478

Query: 499 GL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           G+   AR LTE++AL    A L R    ++AD F   R 
Sbjct: 479 GIEARARRLTERLALVLQGALLVRWAPPEVADAFCAARL 517


>gi|260219466|emb|CBA26311.1| Protein aidB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 560

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 288/518 (55%), Gaps = 33/518 (6%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           +L  AL  + P +    L+ LGE + S   Q  AR+AN + P LH++   G R D+VEFH
Sbjct: 31  ALQSALAFHAPGMDTSALQSLGELMGSRAMQTHARLANTHPPVLHSHDRLGRRVDQVEFH 90

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P++HAL+  +   GLH S WD    P   + AH  RAA   L  + E   L   S+T A 
Sbjct: 91  PSYHALMDAAAQAGLHGSPWD----PAAGEGAHLRRAAAFMLFIEAEPSILCPISMTYAV 146

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           + AL   P V + WAP + +R YDP  K    K  + +G+G+TEK+GG+D+ A T+Q   
Sbjct: 147 LPALRGNPAVFEAWAPGLMARAYDPGFKLYRHKRGLTMGMGMTEKQGGSDVRANTTQA-- 204

Query: 221 ISDG------IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-------GSP 267
           I DG       + L GHKWF S+PM DAF++LAQ    + CF VPR+L D       G+ 
Sbjct: 205 IPDGEDAWGPRFKLLGHKWFFSAPMCDAFLVLAQSPAGLSCFFVPRILPDFADPHSPGTV 264

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +  QRLK+K+GN +NA+ E+EF +   +L+G        + +M  +  LD A+ +   
Sbjct: 265 NAIRIQRLKDKLGNHANASSEVEFQHATAWLVGVEGRGVPQILEMGTMTRLDCALGTTGL 324

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           MR +L+ A+H+  +R   G  LI+QP+M+  +AD+A++  AA AL+ RLA++FD A S  
Sbjct: 325 MRQALSIALHHTSQRQAFGKALIEQPLMRNVLADLAIECEAACALAMRLASAFDHA-SDP 383

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILL 444
            E    R++ P+ KYW CK       EAMEC+GG+GY+E   E ++AR YRE P NSI  
Sbjct: 384 HELLMGRLLTPVAKYWICKRGATFAQEAMECLGGNGYVEEGGEGTMARIYREMPLNSIWE 443

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---- 500
           G+GN M LD+L  L KG        + L ++L  +      + R + SL    + +    
Sbjct: 444 GAGNIMALDLLRALRKGDTA-----AALARELAPARGAHPALDRLAASLPTRVELMATEM 498

Query: 501 -ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            AR L + +ALA  AA LY+   + + + F ++R   N
Sbjct: 499 EARRLAQDVALAVQAALLYQTAPSAVFEAFCDSRLGGN 536


>gi|227886770|ref|ZP_04004575.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972]
 gi|300987248|ref|ZP_07178077.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|222035957|emb|CAP78702.1| Protein aidB [Escherichia coli LF82]
 gi|227836343|gb|EEJ46809.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972]
 gi|300407725|gb|EFJ91263.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|307556354|gb|ADN49129.1| acyl-CoA dehydrogenase family protein [Escherichia coli ABU 83972]
 gi|315293531|gb|EFU52883.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 153-1]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R +T ++ L    A + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505


>gi|256019832|ref|ZP_05433697.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
 gi|300821280|ref|ZP_07101428.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7]
 gi|300922406|ref|ZP_07138526.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1]
 gi|300940674|ref|ZP_07155235.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1]
 gi|331680317|ref|ZP_08380976.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332280972|ref|ZP_08393385.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
 gi|300421225|gb|EFK04536.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1]
 gi|300454562|gb|EFK18055.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1]
 gi|300526169|gb|EFK47238.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7]
 gi|331071780|gb|EGI43116.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332103324|gb|EGJ06670.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|170766651|ref|ZP_02901104.1| acyl-CoA dehydrogenase family protein [Escherichia albertii
           TW07627]
 gi|170124089|gb|EDS93020.1| acyl-CoA dehydrogenase family protein [Escherichia albertii
           TW07627]
          Length = 541

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/522 (36%), Positives = 283/522 (54%), Gaps = 9/522 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      VR  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + A+++  +RHV G  LI+QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L K  + L R +T ++ L    A + +     +A  + +  F
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQMMF 515


>gi|91213736|ref|YP_543722.1| isovaleryl CoA dehydrogenase [Escherichia coli UTI89]
 gi|237703855|ref|ZP_04534336.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|91075310|gb|ABE10191.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|226901767|gb|EEH88026.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
          Length = 547

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             L K  + L R +T ++ L    A + +     +A  +
Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 516


>gi|331671340|ref|ZP_08372138.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
 gi|331071185|gb|EGI42542.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
          Length = 546

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G   D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRHLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRL  ++D  ++ ++EA +AR+  P  K+  CK    ++AEAME +GG GY EE  +
Sbjct: 358 ALLFRLVRAWDR-RADAKEALWARLFTPAVKFVICKRGMPLVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T K+ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHKLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|254037206|ref|ZP_04871283.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|226840312|gb|EEH72314.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43]
          Length = 546

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFLEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|134094276|ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Herminiimonas arsenicoxydans]
 gi|133738179|emb|CAL61224.1| isovaleryl CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 551

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/525 (35%), Positives = 290/525 (55%), Gaps = 18/525 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE--LELLGEYVLSCTAQELARMANYNTPQ 83
           NQ P     N Y+SD  L A +    +  H++  +    E  +  T Q L ++AN++ P+
Sbjct: 10  NQAPDLHDYNLYTSDLALAAGVQREQAGWHEQDLIRYGAELGMQQTLQ-LGQLANHHLPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   G R D VEFHP+WH LL     + LH   W ++     R   H  R A  YL 
Sbjct: 69  LHTHDRFGHRIDTVEFHPSWHQLLAMQRRENLHAMPWSQA-----RAGVHVARTAAYYLQ 123

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T A++  L   P +      K+F+RE+DP +    QK S+ IG+G+T
Sbjct: 124 AQVESGSLCPTTMTFAAIPLLQQEPALFAALQAKLFAREHDPRDLPWAQKHSMLIGMGMT 183

Query: 204 EKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ + T+  + +        Y L+GHKWF S+PM DA ++LA+ E  + CF VP
Sbjct: 184 EKQGGSDVRSNTTVARAVHGSGRGADYALTGHKWFFSAPMCDAHLVLARTENGLSCFFVP 243

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N +  Q+LK+K+GNRSN++ E+EF + +G ++G+       + +M     LD
Sbjct: 244 RWRPDGSRNAVLIQQLKDKLGNRSNSSSEVEFQDAYGVMVGEEGRGIPTIIEMANHTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S   MR +L +AIH+AR R   G  L +QP+M+  ++D+AL+  AAT L  RLA +
Sbjct: 304 CVIGSAGLMRNALVQAIHHARHRSAFGHPLAEQPLMRNVLSDLALESEAATLLMLRLARA 363

Query: 380 FDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            D ++   +   E A+ RI+ P  K+W CK       E ME  GG+GYIE   +AR +RE
Sbjct: 364 ADASRDAPDDLLERAWRRILTPAAKFWVCKRVLEFSGECMEVWGGNGYIENAPMARMFRE 423

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  +E+    F  L   L+   G+    + +I  L + ++L 
Sbjct: 424 APVNSIWEGSGNVMCLDVLRAIEREAEGFALLLQNLQDSAGTHAGLRALIASLHNDLALP 483

Query: 495 KEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
            + + + AR   +++ LA+ A+ + +     +A+ F+ +R    C
Sbjct: 484 PQQQEMQARRFAQRLVLAAQASLMLQHAPASVAEAFIASRIDAEC 528


>gi|26251082|ref|NP_757122.1| isovaleryl CoA dehydrogenase [Escherichia coli CFT073]
 gi|26111514|gb|AAN83696.1|AE016771_207 AidB protein [Escherichia coli CFT073]
          Length = 547

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R +T ++ L    A + +
Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLK 506


>gi|300918352|ref|ZP_07134953.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1]
 gi|300414484|gb|EFJ97794.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1]
          Length = 546

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|110644544|ref|YP_672274.1| isovaleryl CoA dehydrogenase [Escherichia coli 536]
 gi|300988635|ref|ZP_07178775.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|110346136|gb|ABG72373.1| AidB protein [Escherichia coli 536]
 gi|300305868|gb|EFJ60388.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|324013830|gb|EGB83049.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 60-1]
          Length = 546

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/509 (37%), Positives = 279/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   + +  +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R +T ++ L    A + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505


>gi|300928003|ref|ZP_07143556.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1]
 gi|301646634|ref|ZP_07246500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1]
 gi|300463954|gb|EFK27447.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1]
 gi|301075181|gb|EFK89987.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1]
          Length = 546

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|332525870|ref|ZP_08402011.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109421|gb|EGJ10344.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 550

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 198/527 (37%), Positives = 285/527 (54%), Gaps = 15/527 (2%)

Query: 17  QPSDSLFALNQPPLFIGM-----NAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTA 70
            P+DS+ A       +G      +AY +D+ LV A++    +    EL   G    +   
Sbjct: 2   NPNDSVLAETHEVFNVGAELPDHDAYRADAALVEAVVREGAAWADDELSAFGRLTGAAAY 61

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +EL   AN + P+L  +   G R D V FHPA+H L+R +I  GLH +          R 
Sbjct: 62  RELGTEANRHPPELDTHDRFGRRVDLVRFHPAYHTLMRTAIEHGLHSAP-----HTAPRP 116

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            AH  RAA+ YL +Q+EAGH    ++T AS+  L TTP + + W P+I +R YDP N   
Sbjct: 117 GAHVARAAKFYLQSQVEAGHGCPVTMTFASVPTLRTTPALAEAWLPRITARVYDPRNVPD 176

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            QK  V IG+ +TEK+GG+D+ A T+Q +   + G+Y L GHK+F+S+PM DAF++LAQ 
Sbjct: 177 AQKAGVTIGMAMTEKQGGSDVRANTTQARPAGAGGVYELVGHKYFVSAPMCDAFLVLAQA 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G + CFL+PR   DG+ N L   RLK K+GN SNA+ E E      + +GD       +
Sbjct: 237 PGGLSCFLLPRWRPDGTKNALQLLRLKRKMGNVSNASSETELRGALAWRVGDEGRGVRTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M      D  + S +G R + A A+H+A  R   G  L +QP+M+  +AD+AL+  A+
Sbjct: 297 IEMVACTRFDCMVGSSAGQRAAAALALHHATLRSAFGRRLAEQPLMQNVLADLALESEAS 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ RLA + D     + E A  R+   I KYW CK   A  AEAMECIGGSG +E+  
Sbjct: 357 LALTMRLARAMD-TPGDAHEQALLRLGTAIGKYWVCKRTAAHAAEAMECIGGSGVMEDSP 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITIL 487
             R YRE+P N+I  GSGN   LD+L   EK        F+ L    G+  +  + +  L
Sbjct: 416 FPRLYREAPVNAIWEGSGNVQCLDMLRAAEKAPAALHAFFAELAPARGADRRLDRWVAAL 475

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +D  +   + +  AR L +++ALA  A+ L R     +AD F  +R 
Sbjct: 476 QDEFAELSDLEFRARGLVDRMALALQASLLVRHAPAAVADAFCASRL 522


>gi|296157425|ref|ZP_06840260.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295892197|gb|EFG71980.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 561

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 198/568 (34%), Positives = 303/568 (53%), Gaps = 28/568 (4%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLS 67
           R +  Q H+ +      NQ P     N +SSD+ L A +    +  H++  L  G  + +
Sbjct: 3   RHSFGQTHEVT------NQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTT 56

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                LA +AN +TP+L  + P GER D +EFH +WH LL     +GLH   +    +P 
Sbjct: 57  PETLALAELANRHTPELFTHSPRGERIDALEFHASWHTLLSLLRREGLHALPFS---DP- 112

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            ++ A   R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+DP +
Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRD 171

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243
                K S  IG+G+TEK+GG+D+ +  ++    +       Y L GHKWF S+P  DA 
Sbjct: 172 IPLTHKNSAMIGMGMTEKQGGSDVRSNQTRAYATAGRGRGAAYRLVGHKWFFSAPQCDAH 231

Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++L + +   G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD
Sbjct: 232 LVLGRTDDHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD
Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351

Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +AL+  AAT L  RLA +F+E    A +   E A+ RI+ P  KYW CK A     EAME
Sbjct: 352 LALESEAATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +  + LF+  + +  
Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQALFAGWQMEAQ 471

Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +       + + + +L    +  +  AR + +++ L + A  L      ++A+ F+  R 
Sbjct: 472 AHPALSAALGKLAAALNGPAEHREASARRIAQQVVLIAQATLLLEHAPGEVAEAFIATRL 531

Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559
            D C  +   +  L   F+ A I++  +
Sbjct: 532 ADGCGESGRVYGTLPAAFDHAAIVERAF 559


>gi|300949153|ref|ZP_07163195.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1]
 gi|300451401|gb|EFK15021.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1]
          Length = 546

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DSVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|323189934|gb|EFZ75212.1| protein aidB [Escherichia coli RN587/1]
          Length = 541

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDALLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|300816512|ref|ZP_07096733.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1]
 gi|300906017|ref|ZP_07123741.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1]
 gi|301302604|ref|ZP_07208734.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1]
 gi|301325951|ref|ZP_07219372.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1]
 gi|300402184|gb|EFJ85722.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1]
 gi|300530742|gb|EFK51804.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1]
 gi|300842129|gb|EFK69889.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1]
 gi|300847304|gb|EFK75064.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1]
 gi|315255532|gb|EFU35500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 85-1]
          Length = 546

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|323946036|gb|EGB42073.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
          Length = 541

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P + +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPALFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|323965574|gb|EGB61028.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
 gi|327250128|gb|EGE61847.1| protein aidB [Escherichia coli STEC_7v]
          Length = 541

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/522 (36%), Positives = 282/522 (54%), Gaps = 9/522 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L K  + + R +T ++ L    A + +     +A  + +  F
Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQMMF 515


>gi|121609781|ref|YP_997588.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554421|gb|ABM58570.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 559

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 199/540 (36%), Positives = 300/540 (55%), Gaps = 35/540 (6%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQEL 73
           P+ +    NQ   ++ +N ++++  L   +    A+ P      L  LG  + S   QE 
Sbjct: 5   PASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTW---LSALGAEMGSAQMQEH 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           AR+AN + PQLH +   G+R D VEFHP++HAL+  ++  GLH + W R+        AH
Sbjct: 62  ARLANTHKPQLHTHDRFGQRSDMVEFHPSYHALIGAALRHGLHATAWTRT--GAAATHAH 119

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   L  + E   L   S++ A + AL     +  DW   +    YDP      QK
Sbjct: 120 TERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADWHTGLAGTRYDPRLVPYTQK 179

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLA 247
           +++ +G+G+TEK+GG+D+ A T+Q   ++DG       Y L+GHKWF S+PM DAF++LA
Sbjct: 180 SALTMGMGMTEKQGGSDVRANTTQA--LADGADAWGPRYRLTGHKWFFSAPMCDAFLVLA 237

Query: 248 QVEGRVGCFLVPRLL---EDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           Q  G + CF +PR+L   EDG+   N L  QRLK+K+GN +NA+ E+EF +   + +G+ 
Sbjct: 238 QAPGGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEE 297

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M I+  LD A+ +   MR +LA A+++AR+R   G  LIDQP+M+  +AD+
Sbjct: 298 GRGVAQILEMGIMTRLDCALGTSGLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADL 357

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AATALS RLA++FD  +    EA  AR++ P+ K+W CK       EAMEC+GG+
Sbjct: 358 ALESEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVCKRGSVFAQEAMECLGGN 417

Query: 423 GYIEE---RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GY+EE    ++AR YRE P NSI  G+GN M LD+L  L +  +      + L  +L  +
Sbjct: 418 GYVEEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSA-----AALADELAPA 472

Query: 480 --GKKVITILRDSISLCKEDKG---LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                 +  +  ++ L  E  G    AR L + +ALA  AA LYR+    +   F  +R 
Sbjct: 473 RGAHPALDRMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRL 532


>gi|300023177|ref|YP_003755788.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524998|gb|ADJ23467.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 541

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 211/539 (39%), Positives = 298/539 (55%), Gaps = 18/539 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP     N + SD++L  A      S     L+ LG  + S     L   AN NTP L
Sbjct: 6   NQPPPLEDYNLFDSDAVLREAAGREGASWAESSLQALGARLGSADVIALGAEANRNTPTL 65

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+   G R D+V+FHP+WHALL  ++  GLH S W    EP  ++ AH  RAA  +++A
Sbjct: 66  RAFDRSGARIDEVDFHPSWHALLGLAMEAGLHSSPW---AEP--KRGAHVARAAGCFMLA 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G     S+T  ++  L   P V  DW P+IFSR YDP  +   +KTS  IG+ +TE
Sbjct: 121 QIESGVYCPVSMTYGAVPTLKRAPHVAADWLPRIFSRSYDPRFRPAHEKTSALIGMAMTE 180

Query: 205 KRGGTDIAAITSQGQ-KISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +GG+D+ A  S+ +   +DG    Y L+GHKWF+S+PM DAF+MLAQ +    CFLVPR
Sbjct: 181 NQGGSDLRANVSRAEFSEADGERRYYRLNGHKWFMSAPMCDAFLMLAQTDAGPTCFLVPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG+ N +  +RLK+K+GNRSNA+ E+E  N    LLGD       + +M     LD 
Sbjct: 241 WKPDGTRNAIHIRRLKDKLGNRSNASSEVELENAHAELLGDEGRGIPTIIEMGNYTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S   MR ++A+AIH+AR R      L+D  +M   +AD+A++  AA  L+ RLA ++
Sbjct: 301 VIGSSGLMRQAVAQAIHHARYRTTFQKHLVDHALMSNVLADLAIEAEAAALLALRLARAY 360

Query: 381 DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           DE    SEEA  + R++ P  K+W CK APA  AEAME +GG+GY+E+  +AR YRE P 
Sbjct: 361 DE---DSEEALTFRRVVTPAAKFWICKRAPAFAAEAMEVLGGNGYVEDFGLARIYREVPV 417

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKED 497
           NSI  GSGN M LDVL  + K       L   + +D  ++ +++   L    + +    D
Sbjct: 418 NSIWEGSGNIMCLDVLRAIAKAPLAAAVLADEM-RDAATADRRLAQFLARMQATATSIGD 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AR     + +A  A+ L R     +AD F  +R LD       ML    +   I++
Sbjct: 477 EAQARVFVRDLVIALQASLLIRHAPQIVADAFCASR-LDGGSGAFGMLPPGVDTRRIVE 534


>gi|74314668|ref|YP_313087.1| isovaleryl CoA dehydrogenase [Shigella sonnei Ss046]
 gi|73858145|gb|AAZ90852.1| putative acyl coenzyme A dehydrogenase [Shigella sonnei Ss046]
          Length = 546

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|293476498|ref|ZP_06664906.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|291320951|gb|EFE60393.1| acyl-CoA dehydrogenase [Escherichia coli B088]
          Length = 547

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 478 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 518


>gi|331644935|ref|ZP_08346052.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|331035910|gb|EGI08148.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
          Length = 546

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|330818629|ref|YP_004362334.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
 gi|327371022|gb|AEA62378.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
          Length = 557

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 198/541 (36%), Positives = 294/541 (54%), Gaps = 17/541 (3%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70
           M+Q H P  +    NQ P     NA+ +D  L A +    +  H+  L   G  + +   
Sbjct: 1   MDQ-HVPVATHRVTNQAPPLTDYNAFETDLALAAAVERHGAGWHQTALSRHGAALTTADT 59

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             LA +AN +TP+L  +   GER D +EFHP+WH LL     +GLH   +    EP  R 
Sbjct: 60  LALAELANRHTPELSTHSARGERIDALEFHPSWHQLLALLRGEGLHALPFA---EP--RA 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A   R A  +L AQLE+G L   ++T AS+  L   P +      ++++RE+DP +   
Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLKKEPALFDTLRERLYTREHDPRDIPL 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIML 246
             K S+ IG+G+TEK+GG+D+ +  ++   +  G     Y L GHKWF S+P  DA ++L
Sbjct: 175 AGKRSMMIGMGMTEKQGGSDVRSNETRAWPLGAGGRGQPYRLVGHKWFFSAPQCDAHLVL 234

Query: 247 AQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+ +   G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++G+   
Sbjct: 235 ARTDEHAGISCFYVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLDAYGVMVGEEGR 294

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M  +  LD  I S + MR +L +AIH+AR R   G +L +QP+M+  +AD+A+
Sbjct: 295 GVPTIIEMANMTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLAI 354

Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AAT L  RLA++ +     S EA  + RI+ P  K+W CK A     EAME  GG+G
Sbjct: 355 ESEAATMLFMRLADAVEHDDGSSAEARGWRRIVTPAAKFWVCKRAIEFTGEAMEVWGGNG 414

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-- 481
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+       L +   +      +  
Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAVERQPESAAALVAAWREAAAGHPELL 474

Query: 482 KVITILRDSISLCKEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           + I  L D+ +L  E++   AR + ++IAL + A+ L R     +AD F+  R     H 
Sbjct: 475 RAIDQLLDAFALPAEEREASARRIAQRIALIAQASLLIRHAPAAMADAFIATRLGAASHD 534

Query: 541 T 541
           T
Sbjct: 535 T 535


>gi|320193567|gb|EFW68204.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli WV_060327]
          Length = 541

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYLLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|332992135|gb|AEF02190.1| acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 562

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 278/519 (53%), Gaps = 19/519 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSV---VHKELELLGEYVLSCTAQELARMANYNT 81
           NQP      N +  D LL  A++AN  S    V  +L++ G+ V      E   +AN N 
Sbjct: 22  NQPLPLPAYNLWQDDPLLKCAVMANVTSPHADVALQLDVFGQ-VAGFELMEHGELANKNK 80

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+ H +   G R D V FHP++HAL+  ++   +H   W    +    + AH IRAA ++
Sbjct: 81  PEFHPFDRYGRRIDDVAFHPSYHALMSAAMQGNVHNYSWQNESQ----QGAHVIRAALIF 136

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +  Q +AG     ++T A++ AL     +   W  K+   +YD        K  ++IG+G
Sbjct: 137 MQYQADAGTTCPLTMTHAAIPALRQAKGLPDYWVNKVVHGQYDDRTLPAEHKHGLSIGMG 196

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TEK+GG+D+   T+   K  DG Y + GHK+F S+PM D  ++LAQ    +GCFL+PR+
Sbjct: 197 MTEKQGGSDVRRNTTTATKQEDGSYRIVGHKFFFSAPMCDGHLILAQTGAGLGCFLLPRV 256

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + DG+ N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD  
Sbjct: 257 MPDGTLNEVRIQRLKDKLGDWSNASSEVEFQGATAYLIGEEGKGVRVIIDMVSLTRLDCM 316

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I S + MR  L +A H+   R   G  LIDQP+M+  IAD+ L+  A+ AL+ R+A + D
Sbjct: 317 IGSSATMRQGLVQAYHHVSNREAFGATLIDQPLMQNVIADLTLECTASLALTMRVARAVD 376

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            +K+  +EAA ARI   I KYW CK  PA I EA EC+GG GY+EE  + R YR++P NS
Sbjct: 377 ASKTNPKEAALARIATAIGKYWICKRTPAFINEAQECLGGIGYVEENILPRLYRQAPLNS 436

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCK 495
           I  GSGN   LDVL  L K       LF  L    G +       + ++    D+ +L  
Sbjct: 437 IWEGSGNVQCLDVLRALHKEPESKAALFDLLHSAKGRNACYDNHLQSLLDAFEDTATL-- 494

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  +R +TE  A+A   A L     + +A+ F E R 
Sbjct: 495 --EIRSRLITEHTAIAMQGALLLNESDSVMANTFCEARL 531


>gi|224826360|ref|ZP_03699462.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601461|gb|EEG07642.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 541

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 204/528 (38%), Positives = 278/528 (52%), Gaps = 20/528 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ------ 71
           P  +   LNQPP  +  N +SSD      +A    VV +      E +  C A       
Sbjct: 2   PPSAREVLNQPPPLVDYNLFSSD------VALQEGVVREGAAWAREPLFDCGALLGRRDS 55

Query: 72  -ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            EL R+AN   P LH +   G R D+VEFHPAWH L+R  +  GLHC+ W+   EP  R 
Sbjct: 56  FELGRLANRYPPLLHGFDAQGFRLDEVEFHPAWHTLMRGIVERGLHCAPWE---EP--RP 110

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            AH  RAA   L AQ+EAG L   ++T  ++  L     +  DW P + S +YD  +   
Sbjct: 111 GAHVARAAAFLLQAQVEAGTLCPTTMTFGAIPVLSQHAGLTLDWLPTLCSHDYDERDLPL 170

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK    +G+G+TEK+GG+D+   T++ +  +DG Y LSGHKWF S P SDA ++LAQ  
Sbjct: 171 AQKHGGLVGMGMTEKQGGSDVRTNTTRAEPCADGSYRLSGHKWFFSVPQSDAHLVLAQAP 230

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF +PR L DG+ N +C  RLK+K+GNRSNA+ E EF   +  LLG+       + 
Sbjct: 231 GGLSCFFLPRWLPDGTRNAVCLLRLKDKLGNRSNASAEAEFDAAYAVLLGEEGRGVPLIL 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M      D  + S   MR  LA+A+H+ R R   G  LI+QP+M   +AD+AL+  AA 
Sbjct: 291 EMGGHTRFDCLLGSAGMMRQVLAQAVHHCRHRRAFGHRLIEQPLMLNVLADMALETEAAI 350

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+ RLA + D       E    R++ P  KYW CK  P + AEAME +GG+GY+ E   
Sbjct: 351 ALALRLARAADAPDDEG-EMLLRRLLVPAGKYWVCKRGPELAAEAMEVLGGNGYMAESVA 409

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           AR Y E P NSI  GSGN M LDVL  L K     + L + L Q  G        + R S
Sbjct: 410 ARAYAEMPVNSIWEGSGNVMCLDVLRTLAKHPRARDMLLAELAQVPGCHPLYRHALGRLS 469

Query: 491 ISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
             L +   +  AR L  ++ L   A  L R     +A+ F  +R  ++
Sbjct: 470 DQLQRPVAEADARHLVRRMVLLVQAGLLLRHAPEALAEAFCASRLGED 517


>gi|331681206|ref|ZP_08381843.1| protein AidB [Escherichia coli H299]
 gi|331081427|gb|EGI52588.1| protein AidB [Escherichia coli H299]
          Length = 541

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|152980833|ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
 gi|151280910|gb|ABR89320.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 547

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/544 (35%), Positives = 293/544 (53%), Gaps = 18/544 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P  +  N +S DS+LV  I N   S    EL  LG  + +    +L ++AN + P+L
Sbjct: 10  NQVPELLDYNLFSCDSVLVTAIKNSAASWYAPELAALGAALGTRETLQLGQLANQHLPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V+FHP+WH LL       LH   W +      R  AH  R A  YL A
Sbjct: 70  QTHDRFGNRIDRVDFHPSWHQLLAMQRRASLHALPWSQP-----RAGAHIARTAAYYLQA 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G L   ++T A++  L   P +      K+FS  +D  +     K S+ +G+G+TE
Sbjct: 125 QVESGSLCPVTMTFAAIPLLQQEPALFATLKDKLFSTGHDERDLPLPDKASMLVGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GG+D+ + T+  + +        Y L+GHKWF S+PM DA ++LA+ E  + CF VPR
Sbjct: 185 KQGGSDVRSNTTVARPLESAGRGQPYALTGHKWFFSAPMCDAHLVLARTEAGLSCFFVPR 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DGS N +  QRLK+K+GNRSN++ E+EF + +G ++G+       + +M     LD 
Sbjct: 245 WRPDGSKNAILIQRLKDKLGNRSNSSSEVEFQDAYGVMVGEDGRGIPTIIEMANHTRLDC 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S   MR +L +AIH+AR RH  G  L +Q +M+  +AD+AL+  AAT L  RLA + 
Sbjct: 305 VIGSTGLMRNALVQAIHHARHRHAFGLPLAEQALMQNVLADLALESEAATRLMLRLAQA- 363

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            EA     E A+ R++ P  K+W CK A     E ME  GG+GY+E   +AR YRE+P N
Sbjct: 364 AEAIDDPVERAWRRVVTPAAKFWICKRALEFTGECMEVWGGNGYVENAPMARMYREAPVN 423

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE----QLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           SI  GSGN M LDVL  + K  + F+     L    ++D G   +++I  LR  ++L   
Sbjct: 424 SIWEGSGNVMCLDVLRAIAKEADAFKLLLDALLDIAKEDKGL--RELIAELRTDLALPAT 481

Query: 497 DKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            + + AR  T+++ L + +  + +A   +IAD F+ +R        +  L     A  I+
Sbjct: 482 QQEMQARRFTQRLVLVAQSCLMLQAAPANIADAFISSRLDAESGRVYGTLAAPLAAKEIL 541

Query: 556 DSLY 559
           +  +
Sbjct: 542 ERAW 545


>gi|312963212|ref|ZP_07777696.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311282478|gb|EFQ61075.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 551

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/526 (37%), Positives = 277/526 (52%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G  +        
Sbjct: 3   LHQFAETHDVTNQPPSLDGTNLYRIDLPLQDWSRRFGAGWAEPRIDAYGA-LAGGPLMAA 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P  +++   G R D VEFHPA+H L+R ++  GL    W      V     H
Sbjct: 62  GFLANQNKPVFNSHDRYGHRIDWVEFHPAYHELMRTAVEHGLPSLPWAHPQSGV-----H 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA  YL +Q EAG     ++T A + AL   P + K W PKI S  YDP N     K
Sbjct: 117 VARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTHYDPRNVGIAHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV 249
               IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 DKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGAVAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + D      +EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSMRMGRALDHLGD-EQEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G     + I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRPLARRIEQLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                 ++ +  AR LTE IA+A  A  L  AG   ++D F+ +R 
Sbjct: 476 AGFMDTQDIQYRARQLTEDIAVALQAKLLLEAGNAAVSDGFIASRL 521


>gi|110808102|ref|YP_691622.1| isovaleryl CoA dehydrogenase [Shigella flexneri 5 str. 8401]
 gi|110617650|gb|ABF06317.1| putative acyl coenzyme A dehydrogenase [Shigella flexneri 5 str.
           8401]
 gi|332749331|gb|EGJ79752.1| protein aidB [Shigella flexneri 4343-70]
 gi|333009036|gb|EGK28492.1| protein aidB [Shigella flexneri K-218]
          Length = 541

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|157163652|ref|YP_001460970.1| isovaleryl CoA dehydrogenase [Escherichia coli HS]
 gi|157069332|gb|ABV08587.1| acyl-CoA dehydrogenase family protein [Escherichia coli HS]
          Length = 541

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMTFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|194434588|ref|ZP_03066845.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012]
 gi|194417173|gb|EDX33285.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012]
 gi|332083670|gb|EGI88888.1| protein aidB [Shigella dysenteriae 155-74]
          Length = 541

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|168751461|ref|ZP_02776483.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168754758|ref|ZP_02779765.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168760429|ref|ZP_02785436.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168766466|ref|ZP_02791473.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168774100|ref|ZP_02799107.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168780619|ref|ZP_02805626.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168784824|ref|ZP_02809831.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC869]
 gi|168801842|ref|ZP_02826849.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC508]
 gi|195935977|ref|ZP_03081359.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. EC4024]
 gi|208808434|ref|ZP_03250771.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208812533|ref|ZP_03253862.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208820724|ref|ZP_03261044.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209399702|ref|YP_002273729.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217326338|ref|ZP_03442422.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254796206|ref|YP_003081043.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261225307|ref|ZP_05939588.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255441|ref|ZP_05947974.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|187770307|gb|EDU34151.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188014520|gb|EDU52642.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4113]
 gi|189001861|gb|EDU70847.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189357896|gb|EDU76315.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189364227|gb|EDU82646.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189368913|gb|EDU87329.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189374887|gb|EDU93303.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376069|gb|EDU94485.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC508]
 gi|208728235|gb|EDZ77836.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208733810|gb|EDZ82497.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740847|gb|EDZ88529.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161102|gb|ACI38535.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217322559|gb|EEC30983.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254595606|gb|ACT74967.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320190681|gb|EFW65331.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638945|gb|EFX08591.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. G5101]
 gi|320644314|gb|EFX13379.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. 493-89]
 gi|320649632|gb|EFX18156.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. H 2687]
 gi|320655028|gb|EFX22989.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320660535|gb|EFX27996.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665804|gb|EFX32841.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. LSU-61]
 gi|326345481|gb|EGD69224.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. 1125]
 gi|326346662|gb|EGD70396.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. 1044]
          Length = 541

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|191165665|ref|ZP_03027505.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A]
 gi|193070891|ref|ZP_03051823.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019]
 gi|218556739|ref|YP_002389653.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1]
 gi|260858340|ref|YP_003232231.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str.
           11368]
 gi|260870905|ref|YP_003237307.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str.
           11128]
 gi|331671092|ref|ZP_08371925.1| protein AidB [Escherichia coli TA271]
 gi|190904360|gb|EDV64069.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A]
 gi|192955837|gb|EDV86308.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019]
 gi|218363508|emb|CAR01162.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1]
 gi|257756989|dbj|BAI28491.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str.
           11368]
 gi|257767261|dbj|BAI38756.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str.
           11128]
 gi|323155996|gb|EFZ42158.1| protein aidB [Escherichia coli EPECa14]
 gi|323176054|gb|EFZ61646.1| protein aidB [Escherichia coli 1180]
 gi|331061681|gb|EGI33607.1| protein AidB [Escherichia coli TA271]
          Length = 541

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|331660762|ref|ZP_08361694.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
 gi|331051804|gb|EGI23843.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
          Length = 541

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   + +  +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|187925733|ref|YP_001897375.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187716927|gb|ACD18151.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 561

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 200/568 (35%), Positives = 302/568 (53%), Gaps = 28/568 (4%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLS 67
           R +  Q H+ +      NQ P     N +SSD+ L A +    +  H+  L   G  + +
Sbjct: 3   RHSFGQTHEVT------NQVPPLADYNLFSSDAALSAALERDGAGWHRGALVRHGAALTT 56

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                LA +AN + P+L  + P GER D +EFHP+WHALL     +GLH   +    +P 
Sbjct: 57  PETLALAELANRHEPELVTHSPRGERIDALEFHPSWHALLSLLRREGLHALPFS---DP- 112

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            ++ A   R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+D  +
Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDSRD 171

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243
               QKTS  IG+G+TEK+GG+D+ +  ++    +       Y L GHKWF S+P  DA 
Sbjct: 172 LPLKQKTSAMIGMGMTEKQGGSDVRSNQTRAYSTAGSGRGAAYRLVGHKWFFSAPQCDAH 231

Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++L + +   G  CF VPR   DG  N +  QRLK+K+GNRSNA+ E+EF + FG ++GD
Sbjct: 232 LVLGRTDEHEGLSCFYVPRFAPDGRKNNVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD
Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351

Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +AL+  AAT L  RLA +F+E    A +   E A+ RI+ P  KYW CK A     EAME
Sbjct: 352 LALESEAATVLFMRLARAFEESTDAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+    D  
Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAAWHADAQ 471

Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +       + + + +L    +  +  AR + +++ L + A  L +    ++A+ F+  R 
Sbjct: 472 AHPALSAALGKLAATLNGPAEHREASARRIAQQVVLIAQATLLLKHAPAEVAEAFVATRL 531

Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559
            + C  +   +  L   F+ A II+  +
Sbjct: 532 AEGCGESGRVYGTLPATFDHAAIIERAF 559


>gi|111021227|ref|YP_704199.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820757|gb|ABG96041.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 545

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/535 (35%), Positives = 287/535 (53%), Gaps = 8/535 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           +NQ P  +  +A     +L AL       V +EL  +G    S  AQ    +A  + P L
Sbjct: 8   VNQVPPLVNFDAADYPPILEALQREGAHDVLEELHDVGRLAGSEDAQRWGDLAEAHPPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VE+ PA+H L+  ++  GLH + W    +P  R  AH +RAA++ +  
Sbjct: 68  RTHDRYGNRIDEVEYDPAYHQLMTTAVEMGLHGAPW---ADPHPR--AHLVRAAKMAVWG 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q++AGH    S+T A + AL     + + + P + +R YDP    P+ K  +  G+ +TE
Sbjct: 123 QVDAGHGCPISMTYAVVPALRHNRELAQQYEPPLTARVYDPALHPPLTKAGLIAGMSMTE 182

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +PR+L D
Sbjct: 183 KQGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  LD  I +
Sbjct: 243 GTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRLDCTIGT 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +GMRV  A+A H+A  R   G  L+DQP+M+  +AD+A++  AAT ++  LA   D A 
Sbjct: 303 ATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAALTDRAT 362

Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  E A    RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+P  S+ 
Sbjct: 363 AGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVW 422

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGLA 501
            GSGN   LD L  + K     +  F  L+   G+  +    +     S    D  +  A
Sbjct: 423 EGSGNVAALDTLRAMAKQPETLQVFFDELDSTAGADARLDAAVADLKASFGDRDTLEHRA 482

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R +   +ALA   + L R G   +AD F  +R   +  +    L    + A IID
Sbjct: 483 RRVVGDMALALQGSLLIRHGHPAVADAFCVSRLSGDWGTVFGTLPTGVDTAAIID 537


>gi|157158060|ref|YP_001465687.1| isovaleryl CoA dehydrogenase [Escherichia coli E24377A]
 gi|193066012|ref|ZP_03047070.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22]
 gi|194426602|ref|ZP_03059156.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171]
 gi|260847017|ref|YP_003224795.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str.
           12009]
 gi|307314865|ref|ZP_07594457.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|157080090|gb|ABV19798.1| acyl-CoA dehydrogenase family protein [Escherichia coli E24377A]
 gi|192926335|gb|EDV80971.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22]
 gi|194415341|gb|EDX31609.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171]
 gi|257762164|dbj|BAI33661.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str.
           12009]
 gi|306905668|gb|EFN36197.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|315063501|gb|ADT77828.1| isovaleryl CoA dehydrogenase [Escherichia coli W]
 gi|323380420|gb|ADX52688.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
          Length = 541

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|293417690|ref|ZP_06660312.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|291430408|gb|EFF03406.1| acyl-CoA dehydrogenase [Escherichia coli B185]
          Length = 546

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ + + DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAEHLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|218561346|ref|YP_002394259.1| isovaleryl CoA dehydrogenase [Escherichia coli S88]
 gi|218368115|emb|CAR05922.1| isovaleryl CoA dehydrogenase [Escherichia coli S88]
 gi|294490556|gb|ADE89312.1| acyl-CoA dehydrogenase family protein [Escherichia coli IHE3034]
 gi|307629259|gb|ADN73563.1| isovaleryl CoA dehydrogenase [Escherichia coli UM146]
 gi|323950744|gb|EGB46622.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|323955474|gb|EGB51238.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
          Length = 541

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/517 (36%), Positives = 280/517 (54%), Gaps = 9/517 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           L K  + L R +T ++ L    A + +     +A  +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 510


>gi|323171625|gb|EFZ57271.1| protein aidB [Escherichia coli LT-68]
          Length = 541

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSARYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|41410231|ref|NP_963067.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399065|gb|AAS06683.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 532

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/510 (37%), Positives = 276/510 (54%), Gaps = 10/510 (1%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           PPL    N   S  L+ ALI         E+  +G    S  AQ    +A+ N P LH +
Sbjct: 2   PPLD-NYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELADRNRPILHTH 60

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA+  +   +E
Sbjct: 61  DRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAAKTSVWT-VE 114

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  G+ +TEK+G
Sbjct: 115 PGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITAGMSMTEKQG 174

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+PR+L DG+ 
Sbjct: 175 GSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLLPRVLPDGTR 234

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD  + S + 
Sbjct: 235 NRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATS 294

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSR 386
           MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + D+A +  
Sbjct: 295 MRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDKAVRGD 354

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+P   I  GS
Sbjct: 355 QREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREAPLMGIWEGS 414

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFL 504
           GN   LD L  +       E LF  L +  G   +    +  LR  ++     +  AR +
Sbjct: 415 GNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELDTIQYRARKV 474

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRF 534
            E I LA   + L R G   +A+ FL  R 
Sbjct: 475 AEDICLALQGSLLVRHGHPAVAEAFLTTRL 504


>gi|170021803|ref|YP_001726757.1| isovaleryl CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|194439544|ref|ZP_03071618.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1]
 gi|253775188|ref|YP_003038019.1| isovaleryl CoA dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254164116|ref|YP_003047224.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|256025122|ref|ZP_05438987.1| isovaleryl CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|297520036|ref|ZP_06938422.1| isovaleryl CoA dehydrogenase [Escherichia coli OP50]
 gi|301028009|ref|ZP_07191293.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1]
 gi|312974004|ref|ZP_07788175.1| protein aidB [Escherichia coli 1827-70]
 gi|169756731|gb|ACA79430.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|194421543|gb|EDX37556.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1]
 gi|242379708|emb|CAQ34533.1| isovaleryl-CoA dehydrogenase / predicted acyl-CoA dehydrogenase
           [Escherichia coli BL21(DE3)]
 gi|253326232|gb|ACT30834.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253976017|gb|ACT41688.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|253980173|gb|ACT45843.1| isovaleryl CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|299878919|gb|EFI87130.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1]
 gi|309704692|emb|CBJ04042.1| probable acyl CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310331538|gb|EFP98794.1| protein aidB [Escherichia coli 1827-70]
 gi|323940106|gb|EGB36300.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323960231|gb|EGB55872.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
 gi|323970558|gb|EGB65817.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
          Length = 541

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|312948836|gb|ADR29663.1| isovaleryl CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 541

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/507 (37%), Positives = 277/507 (54%), Gaps = 9/507 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R +T ++ L    A + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500


>gi|170680540|ref|YP_001746582.1| isovaleryl CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|170518258|gb|ACB16436.1| acyl-CoA dehydrogenase family protein [Escherichia coli SMS-3-5]
          Length = 541

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKHGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|191170861|ref|ZP_03032413.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11]
 gi|190909085|gb|EDV68672.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11]
          Length = 541

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 188/507 (37%), Positives = 278/507 (54%), Gaps = 9/507 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   + +  +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R +T ++ L    A + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500


>gi|218697937|ref|YP_002405604.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989]
 gi|312965861|ref|ZP_07780087.1| protein aidB [Escherichia coli 2362-75]
 gi|218354669|emb|CAV01673.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989]
 gi|312289104|gb|EFR16998.1| protein aidB [Escherichia coli 2362-75]
 gi|320200683|gb|EFW75269.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli EC4100B]
 gi|323182293|gb|EFZ67703.1| protein aidB [Escherichia coli 1357]
 gi|324118752|gb|EGC12644.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
          Length = 541

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|281181283|dbj|BAI57613.1| putative acyl-CoA dehydrogenase [Escherichia coli SE15]
          Length = 541

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 189/517 (36%), Positives = 280/517 (54%), Gaps = 9/517 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           L K  + L R +T ++ L    A + +     +A  +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQTW 510


>gi|82546571|ref|YP_410518.1| isovaleryl CoA dehydrogenase [Shigella boydii Sb227]
 gi|81247982|gb|ABB68690.1| putative acyl coenzyme A dehydrogenase [Shigella boydii Sb227]
          Length = 546

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|323161979|gb|EFZ47851.1| protein aidB [Escherichia coli E128010]
          Length = 541

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNTIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|307140881|ref|ZP_07500237.1| isovaleryl CoA dehydrogenase [Escherichia coli H736]
 gi|284924370|emb|CBG37489.1| probable acyl CoA dehydrogenase [Escherichia coli 042]
 gi|332346267|gb|AEE59601.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 541

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|323935312|gb|EGB31660.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
          Length = 541

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSGRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|301045980|ref|ZP_07193163.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|300302023|gb|EFJ58408.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
          Length = 546

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/509 (37%), Positives = 277/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +    
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQM 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R +T ++ L    A + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505


>gi|457172|gb|AAC18889.1| putative; homology to acyl CoA dehydrogenases and isovaleryl CoA
           dehydrogenases [Escherichia coli]
 gi|537028|gb|AAA97083.1| CG Site No. 18553; induced by alkylating agents; an apparent
           frameshift in GenBank Accession Number L20915 results in
           two overlapping orfs in that sequence [Escherichia coli
           str. K-12 substr. MG1655]
          Length = 546

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|84496268|ref|ZP_00995122.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84383036|gb|EAP98917.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 547

 Score =  319 bits (818), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 193/524 (36%), Positives = 283/524 (54%), Gaps = 20/524 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83
           +NQ P F+G N +SSD + V  +  +       EL  LG    +   Q  A  A+ NTP+
Sbjct: 7   VNQVPAFVGHNLFSSDEVAVEAMHRWGRAEDVAELTALGSLAGAAQTQAWADDAHRNTPR 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+V +  ++H L+R ++  GL    W R  +      AH  RAA     
Sbjct: 67  LVTHDRVGHRIDEVAYDRSYHDLMRTAVGHGLTAEAWTRPAD----TGAHLRRAAGFVTW 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           ++ EAGHL   S+T A+  AL  +P +   W P + SR+YDP  K    + S   G+G+T
Sbjct: 123 SRAEAGHLCPISMTYAAAPALRVSPALADRWLPLLASRDYDPELKPFSDRRSAIAGMGMT 182

Query: 204 EKRGGTDIAAITSQ-----GQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           EK+GG+D+ A  +Q     G  I  G  Y L+GHKWF S+PMSD F++LA  E  V CFL
Sbjct: 183 EKQGGSDVRANVTQAVATPGGPIDGGDTYRLTGHKWFFSAPMSDVFLVLATTESGVTCFL 242

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L+DG+ N L  QRLK+K+GNRSNA+ E+EF   +   +G        + +M     
Sbjct: 243 VPRVLDDGTRNALRLQRLKDKLGNRSNASSEVEFEGAWAVRVGGDGRGIRTIIEMVSSTR 302

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S + MR +   A+H+AR R   G  LI+QP+M+  +AD+A++  AA  L FRLA
Sbjct: 303 LDCILGSSATMRQATVRAVHHARHRSAFGARLIEQPLMRNVLADLAIEAEAAELLGFRLA 362

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++ D  +S       AR+   + K+W CK  P ++ EA+EC+GG+GY+EE  +AR YRE+
Sbjct: 363 HAVDAGESE-----LARLGVALGKFWVCKRTPHLVGEALECLGGAGYVEENGLARLYREA 417

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCK 495
           P NSI  GSGN   LDVL  + +       L   L    G   +  + I  +   ++   
Sbjct: 418 PLNSIWEGSGNVGALDVLRAMTREPASVAALDKELSLARGHDRRLDLAIDAVPALVAAAG 477

Query: 496 EDKGL--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            D G   AR + E +A+   AA L +   + +AD F+ +R  + 
Sbjct: 478 SDSGAWQARGIVEHLAVTFQAALLVQHSPHAVADTFIASRLAEG 521


>gi|161505123|ref|YP_001572235.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866470|gb|ABX23093.1| hypothetical protein SARI_03257 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 540

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 187/516 (36%), Positives = 281/516 (54%), Gaps = 7/516 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARM 76
           P  +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+
Sbjct: 2   PWQTHTVFNQPTPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRL 61

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  Y P G+R D V FHPAWH L++    + +H   W        R  +   R
Sbjct: 62  ANAYPPELQRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLSWAED----ARAGSFVAR 117

Query: 137 AARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           AAR  L AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  
Sbjct: 118 AARFVLHAQVEAGALCPVTMTFAATPLLLRMLPATFHDWLAPLRSDRYDSHLLPGGQKRG 177

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           + IG+G+TEK+GG+D+ + T++  +++DG Y L GHKWF S P SDA ++LAQ +G V C
Sbjct: 178 LLIGMGMTEKQGGSDVLSNTTRADRLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGGVSC 237

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M  +
Sbjct: 238 FFVPRFLPDGQRNAVRLERLKDKLGNRSNASAEVEFQDAVGWLLGEEGEGIRHILKMGGM 297

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              D A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FR
Sbjct: 298 TRFDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFR 357

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA ++ E +S ++EA +AR++ P  K+  CK     +AEAME +GG GY EE  + R YR
Sbjct: 358 LARAW-EQRSEAKEALWARLLTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYR 416

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           E P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K
Sbjct: 417 EMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLGEVFAEVKGQDRHYDRAVRQLQQRLRK 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
            D+ + R +T+++ L    A + R     +A  + +
Sbjct: 477 PDEVMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|306815598|ref|ZP_07449747.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101]
 gi|305851260|gb|EFM51715.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101]
          Length = 541

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 190/507 (37%), Positives = 277/507 (54%), Gaps = 9/507 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHILSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R +T ++ L    A + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQVLK 500


>gi|315617595|gb|EFU98201.1| protein aidB [Escherichia coli 3431]
          Length = 541

 Score =  319 bits (817), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 190/522 (36%), Positives = 282/522 (54%), Gaps = 9/522 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+     S     L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      VR  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + A+++  +RHV G  LI+QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI   SGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEDSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L K  + L R +T ++ L    A + +     +A  + +  F
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQMMF 515


>gi|218692520|ref|YP_002400732.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a]
 gi|218430084|emb|CAR10931.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a]
          Length = 541

 Score =  319 bits (817), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 188/507 (37%), Positives = 275/507 (54%), Gaps = 11/507 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73
           Q H   + L  LN   L++     S  +L  A+     S     L  +G+ + +  + EL
Sbjct: 4   QTHTVFNQLIPLNNSNLYL-----SDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R +T ++ L    A + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500


>gi|188492162|ref|ZP_02999432.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638]
 gi|188487361|gb|EDU62464.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638]
          Length = 541

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 187/509 (36%), Positives = 275/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N Y SD  L   +    +    + L  +G+ + +  + EL R+AN N P+
Sbjct: 9   FNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGRLANVNPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G R D V FHPAWH L++    + +H   W+       R  A   RAAR  L 
Sbjct: 69  LLRYDAQGRRLDYVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAFVARAARFMLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G + CF VPR L
Sbjct: 185 TEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M  +   D A+
Sbjct: 245 PDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA ++D 
Sbjct: 305 GSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDR 364

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 365 -RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + R    L K  + L R
Sbjct: 424 WEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T ++ L    A + +     +A  + +
Sbjct: 484 EITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|89110907|ref|AP_004687.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           W3110]
 gi|162135915|ref|NP_418608.6| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|170083633|ref|YP_001732953.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238903294|ref|YP_002929090.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952]
 gi|12644215|sp|P33224|AIDB_ECOLI RecName: Full=Putative acyl-CoA dehydrogenase AidB
 gi|206582016|pdb|3DJL|A Chain A, Crystal Structure Of Alkylation Response Protein E. Coli
           Aidb
 gi|457174|gb|AAC18890.1| alternative putative coding sequence; GTG start codon; homology to
           acyl CoA dehydrogenases and isovaleryl CoA
           dehydrogenases [Escherichia coli]
 gi|85676938|dbj|BAE78188.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082384|gb|AAC77144.2| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|169891468|gb|ACB05175.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861568|gb|ACR63566.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952]
 gi|260450986|gb|ACX41408.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|315138741|dbj|BAJ45900.1| isovaleryl CoA dehydrogenase [Escherichia coli DH1]
          Length = 541

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|320187361|gb|EFW62055.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella flexneri CDC 796-83]
 gi|332087102|gb|EGI92236.1| protein aidB [Shigella boydii 3594-74]
          Length = 541

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|226362674|ref|YP_002780452.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241159|dbj|BAH51507.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 563

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 197/533 (36%), Positives = 288/533 (54%), Gaps = 23/533 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N ++ D++L   +    +    +EL  +G  V S   Q  A +
Sbjct: 14  PHRTHTVLNQSVPRTDVNEFTLDTVLSDAVRRHDAAWATQELTDVGALVGSAQFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W    +P  +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L AQ+E GH    S+T+A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFAQIEPGHSCPISMTNAVIPSLDLQPDVAAIWKPRALSRSYIPELDAP-GKASA 187

Query: 197 AIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+     G+    G Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTVAKPAGRGGPGGDYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 GGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVARTRLDCVLGSAAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  S  +E ++ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATVTALRLARAHDEDAS-EQERSFRRLATAVAKYWICKRGPHHAYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KK 482
            +AR YRE P  ++  GSGN + LDVL  + +  +      + +    GS+        +
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNTVLDAHLDR 486

Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           V   L D  +L      L AR + E +ALA  A+ L R     +AD F++ R 
Sbjct: 487 VRRQLGDLATLDPASAQLRARTVVESMALALQASLLIRFSPAAVADTFVDARL 539


>gi|313500760|gb|ADR62126.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 550

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 198/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARAAMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGYGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +   + +  AR LTE IALA  A  L  AG  D++D F+ +R 
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRL 521


>gi|315446015|ref|YP_004078894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264318|gb|ADU01060.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 544

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/518 (36%), Positives = 276/518 (53%), Gaps = 9/518 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+   +NQ P     N  SS  L  ALI         ++  LG    S TA     +A+ 
Sbjct: 5   DTHAVINQVPPLENFNPASSPVLAEALIREGGGWGADDVADLGALAGSVTAVRWGELADR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P L  +   G R D+VEF P++H L+  ++  GLH + W        R  AH +RAA+
Sbjct: 65  NRPMLRTHDRYGHRVDEVEFDPSYHELMNVAVTHGLHAAPWADD-----RVGAHVVRAAK 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    EAGHL   S+T A + AL   P +   + P + SR YD   + P  K  +  G
Sbjct: 120 TSVWTP-EAGHLCPISMTYAVVPALRHNPDLAAVYEPLLTSRVYDAELRVPTTKPGITAG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T++ +   DG Y L+GHKWF S+PM D F++LAQ  G + CF +P
Sbjct: 179 MSMTEKQGGSDVRAGTTEARANGDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLP 238

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD
Sbjct: 239 RILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLD 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A +
Sbjct: 299 CTLGSATSMRNGLMRAVHHAQHRKAFGRYLIDQPLMRNVLADLAVEAEAATMLAMRMAGA 358

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A +    E    RI     KYW CK A    AEAMEC+GG+GY+E+  +AR YRE+P
Sbjct: 359 TDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDFGMARLYREAP 418

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED- 497
              I  GSGN   LD L  +       E LF  L +  G   +    + R  + L   D 
Sbjct: 419 LMGIWEGSGNVSALDALRAMATRPECIEVLFGELAETDGQDPRLDAHVHRLRLELSDIDA 478

Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR + E I+LA   + L R G   +A+VFL +R 
Sbjct: 479 IEYRARRVAEDISLALQGSLLVRHGHPAVAEVFLASRL 516


>gi|209517312|ref|ZP_03266155.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209502195|gb|EEA02208.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 562

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 200/553 (36%), Positives = 295/553 (53%), Gaps = 25/553 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ-ELARMANYNTPQL 84
           NQ P     N ++SD+ L   +    +  H+E  L     L+  A   LA +AN +TP+L
Sbjct: 14  NQAPPLADYNLFASDTALSEAVDRDGAQWHREALLRHGAALTTPATLALAELANRHTPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHPAWH LL     +GLH   +    EP  +  A   R A  +L A
Sbjct: 74  ITHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---EP--QNGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G L   ++T AS+  L + P +       +++RE+DP +    QK S  IG+G+TE
Sbjct: 129 QIESGSLCPLTMTFASIPVLQSEPALFATLREALYTREHDPRDLPLTQKRSAMIGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257
           K+GG+D+ +  ++   +           L GHKWF S+P  DA ++LA+     G  CF 
Sbjct: 189 KQGGSDVRSNQTRAHALDGAGGRGGAYRLIGHKWFFSAPQCDAHLVLARTGTHEGLSCFF 248

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD       + +M     
Sbjct: 249 VPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVPTIIEMANYTR 308

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I S + MR SL +AIH+AR R   G  L +QP+M+  +AD+AL+  AAT L  RLA
Sbjct: 309 LDCVIGSAALMRASLVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESEAATVLFMRLA 368

Query: 378 NSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +F+     + + S E A+ RI+ P  KYW CK A     EAME  GG+GY+E   +AR 
Sbjct: 369 RAFEGSDDASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMARF 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           YRE+P NSI  GSGN M LDVL  +E+     + LF+   QD+  +   +   L    + 
Sbjct: 429 YREAPVNSIWEGSGNVMCLDVLRAMEREPQAAQALFAAW-QDVARAHPALGAALARLAAT 487

Query: 494 ----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLH 546
                ++ +  AR + ++I L + A  L +     +AD F+  R  D C  +   +  L 
Sbjct: 488 LNGPAEQREASARRIAQQIVLIAQATLLAQHAPATVADAFIATRLADGCGESGRVYGTLP 547

Query: 547 GRFNAAHIIDSLY 559
             F+ A I++  +
Sbjct: 548 ATFDHAAIVERAF 560


>gi|331650312|ref|ZP_08351384.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
 gi|331040706|gb|EGI12864.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
          Length = 546

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/509 (36%), Positives = 277/509 (54%), Gaps = 9/509 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 TFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  + L R ++ ++ L    A + +
Sbjct: 477 QQLRKPAEELGREISHQLFLLGCGAQMLK 505


>gi|187733139|ref|YP_001882876.1| isovaleryl CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|187430131|gb|ACD09405.1| acyl-CoA dehydrogenase family protein [Shigella boydii CDC 3083-94]
          Length = 541

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|302522630|ref|ZP_07274972.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302431525|gb|EFL03341.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 450

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 181/436 (41%), Positives = 251/436 (57%), Gaps = 15/436 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80
           NQPP  +G + + +D  L   +     P+++     EL  LG    S  AQE    AN N
Sbjct: 23  NQPPPLVGYDVFGADRALSEAVERHLDPALLPGARTELSELGRAAGSAQAQEWGAQANEN 82

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHPAWH LL  ++  GL  S W        R   H  RAA  
Sbjct: 83  PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 134

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
               Q EAGH    S+T A++ AL   P +  +W P + SR YD   +    K     G+
Sbjct: 135 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFGM 194

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+ A T++   ++ DG + L+GHKWF S+PMSD F++L Q  G + CFLVP
Sbjct: 195 GMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFLVP 254

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     LD
Sbjct: 255 RVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEMVSATRLD 314

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S + MR ++A+AIH+A  R   GG L+ +P+M   +AD+AL+  AAT L+ RLA +
Sbjct: 315 CALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAAA 374

Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +D A +  E E A  R+  P+ KYW  K    V+AEA+EC+GG+GY+EE  + R  RESP
Sbjct: 375 YDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVAEALECLGGNGYVEESGLPRLLRESP 434

Query: 439 ANSILLGSGNAMVLDV 454
            NS+  GSGN   LDV
Sbjct: 435 LNSLWEGSGNVQALDV 450


>gi|169630939|ref|YP_001704588.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169242906|emb|CAM63934.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 544

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/519 (36%), Positives = 272/519 (52%), Gaps = 9/519 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           +D+    NQ P     NA +S  L+ ALI         E+  +G    +   Q    +AN
Sbjct: 2   ADTHVVTNQVPALRDYNAATSPVLMEALIREGGQWGVDEVLEVGALNGTDRMQRAGELAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D++EF PA+H L+R ++  GLH + W        R  AH +RAA
Sbjct: 62  RNRPVLHTHDRWGHRVDEIEFDPAYHELMREAVAHGLHGAPWADE-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +    + GH+   S+T A + AL   P +   + P + SR YDP    P  K  +  
Sbjct: 117 KTGVWTA-DPGHMCPISMTYAVVPALRANPELAAVYEPLLSSRVYDPVLAVPTAKAGLTA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+     +DG Y L GHKWF S+PM D F++LAQ  G + CF +
Sbjct: 176 GMSMTEKQGGSDVRAGTTTATPSADGSYTLVGHKWFTSAPMCDVFLVLAQAPGGLSCFFL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  L
Sbjct: 236 PRVLPDGSRNRMRLQRLKDKLGNHSNASSEVEYDEATAWLVGEEGKGVKTIIEMVNMTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  +A A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGVALAMHHAQHRKAFGEYLIDQPLMRNVLADLAIEAEAATMVAMRMAG 355

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A    E E+   RI    +KYW CK A     EAMEC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDRATRGDETESLLRRIGLAASKYWVCKRATPHAGEAMECLGGNGYVEDSGLPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L    G   +  + I  L   +S  +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFKELALAQGQDERLDRHINGLHSQLSDLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                AR + E I LA   A L R G   +A  FL  R 
Sbjct: 476 SVTYRARKVAEDICLALQGALLVRHGHPAVAQAFLATRL 514


>gi|323975471|gb|EGB70572.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
          Length = 541

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/522 (36%), Positives = 281/522 (53%), Gaps = 9/522 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASGEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K   CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKLVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L K  + + R +T ++ L    A + +     +A  + +  F
Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQMMF 515


>gi|333011169|gb|EGK30583.1| protein aidB [Shigella flexneri K-272]
 gi|333012637|gb|EGK32017.1| protein aidB [Shigella flexneri K-227]
          Length = 541

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   + W   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQGWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|300955250|ref|ZP_07167643.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1]
 gi|300317827|gb|EFJ67611.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1]
          Length = 546

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DSVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L G KWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGDKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|213859959|ref|ZP_03385663.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 540

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 280/509 (55%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++AR+R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHARQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|209921676|ref|YP_002295760.1| isovaleryl CoA dehydrogenase [Escherichia coli SE11]
 gi|209914935|dbj|BAG80009.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
          Length = 546

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/523 (36%), Positives = 283/523 (54%), Gaps = 13/523 (2%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNK 188
           A   RAAR  L AQ+EAG L   ++T A+   ++ ++  P   +DW   + S  YD    
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLLAP--FQDWTTPLLSDRYDSHLL 175

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
              QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ
Sbjct: 176 PGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        
Sbjct: 236 TTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRL 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +  
Sbjct: 296 ILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEG 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE 
Sbjct: 356 QTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEES 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R
Sbjct: 415 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRR 474

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
               L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 475 LQQQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|161486769|ref|NP_808015.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 546

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 15  FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 75  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 130

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI+YA +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 311 GSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|295678013|ref|YP_003606537.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295437856|gb|ADG17026.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 562

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 200/553 (36%), Positives = 298/553 (53%), Gaps = 25/553 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLSCTAQELARMANYNTPQL 84
           NQ P     N ++SD+ L A +    +  H+E  L  G  + +     LA +AN +TP+L
Sbjct: 14  NQAPALADYNLFASDAALSAAVDRDGASWHREALLRHGATLTTPDTLALAELANRHTPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHPAWH LL     +GLH   +    +P  R  A   R A  ++ A
Sbjct: 74  VTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP--RSGAMAARCAGYFMHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G L   ++T AS+  L   P +      ++++RE+DP +    QK S+ IG+G+TE
Sbjct: 129 QIESGSLCPLTMTFASIPVLQREPVLFDTLRVQLYTREHDPRDVPLTQKRSMMIGMGMTE 188

Query: 205 KRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257
           K+GG+D+ +  ++   +           L GHKWF S+P  DA ++LA+ +   G  CF 
Sbjct: 189 KQGGSDVRSNRTRAHALDGAGGRGGAYGLIGHKWFFSAPQCDAHLVLARTDTHEGLSCFF 248

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD       + +M     
Sbjct: 249 VPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVPTIIEMANYTR 308

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  I S + MR +L +AIH+AR R   G  L +QP+M+  +AD+AL+  AAT L  RLA
Sbjct: 309 LDCVIGSAALMRAALVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESEAATVLFMRLA 368

Query: 378 NSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +F    D + + S E A+ RI+ P  KYW CK A     EAME  GG+GY+E   +AR 
Sbjct: 369 RAFEESADASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMARF 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS----GKKVITILRD 489
           YRE+P NSI  GSGN M LDVL  +E+     + LF+   QD+  +    G  ++ +   
Sbjct: 429 YREAPVNSIWEGSGNVMCLDVLRAIEREPQAAQALFAAW-QDVARAHPALGAALVRLATT 487

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS---THCMLH 546
                ++ +  AR + ++I L + A  L +     +AD F+  R  D C      +  L 
Sbjct: 488 LNGPAEQREASARRIAQQIVLIAQATLLAQHAPAAVADAFIATRVADGCGENGRVYGTLP 547

Query: 547 GRFNAAHIIDSLY 559
             F+ A II+  +
Sbjct: 548 ATFDHAAIIERAF 560


>gi|29140312|gb|AAO71875.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 540

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI+YA +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|56130425|gb|AAV79931.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 540

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +  +RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVVRAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|320177552|gb|EFW52542.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella boydii ATCC 9905]
          Length = 541

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 188/519 (36%), Positives = 278/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP        Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSKLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D     ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDRCAD-AKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|238028894|ref|YP_002913125.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           glumae BGR1]
 gi|237878088|gb|ACR30421.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1]
          Length = 558

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 293/535 (54%), Gaps = 19/535 (3%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70
           M+Q   P+ +    NQ P     NA+ +D  L + +    +  H+  L   G  + +   
Sbjct: 1   MDQ-QAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADT 59

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             LA +AN + P+L  + P GER D +EFHP+WH LL     +GLH   +    EP  R 
Sbjct: 60  LALAELANRHPPELATHSPRGERLDALEFHPSWHQLLALLRGEGLHALPFS---EP--RA 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A   R A  +L AQLE+G L   ++T AS+  L   P +      ++++RE+DP +   
Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRERLYTREHDPRDVPL 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIML 246
             K S+ +G+G+TEK+GG+D+ +  ++    G       Y L GHKWF S+P  DA ++L
Sbjct: 175 AAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVL 234

Query: 247 AQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+     G  CF VPR   DG+ N +  QRLK+K+GNRSNA+ E+EF + +G ++G+   
Sbjct: 235 ARSAEHAGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGR 294

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M  L  LD  I S + MR +L +AIH+AR RH  G  L DQP+M+  +AD+AL
Sbjct: 295 GVPTIIEMANLTRLDCVIGSAALMRAALVQAIHHARHRHAFGRRLADQPLMRNVLADLAL 354

Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AAT L  RLA++ +    R  EA  + RI+ P  K+W CK A     EAME  GG+G
Sbjct: 355 ESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRALEFTGEAMEVWGGNG 414

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +    L +    DLG   ++V
Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGER-REV 473

Query: 484 ITILRDSISL----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              L D ++      +  +  AR + ++IAL + AA L R    ++AD F+  RF
Sbjct: 474 RRALDDLLATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRF 528


>gi|161936197|ref|YP_153243.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 546

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 15  FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +  +RAAR  L 
Sbjct: 75  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVVRAARFVLH 130

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 251 PDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|312138716|ref|YP_004006052.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888055|emb|CBH47367.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 545

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 191/534 (35%), Positives = 293/534 (54%), Gaps = 8/534 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  I  +A     +L AL          E+  +G       AQ L  +A  + P L 
Sbjct: 9   NQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAHPPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+ PA+H L+  ++  GLH + W    +P  R QAH IRAA+  +  Q
Sbjct: 69  THDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPW---ADP--RPQAHLIRAAKNAVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           ++AGH    S+T A + AL   P + + + P + ++ YDP  +AP+ K  +  G+ +TEK
Sbjct: 124 VDAGHGCPISMTYAVVPALRHDPELARQYEPLLTAKVYDPELRAPLTKPGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T++     DG Y ++GHKWF S+PMSD F++LAQ  G + CFL+PR+L DG
Sbjct: 184 QGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPRILPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N +  QRLK+K+GN SNA+ E+E+ +   + +GD       + +M  +  LD  I + 
Sbjct: 244 SRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDCTIGTA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GMR+ +A+A H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   D A +
Sbjct: 304 TGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHADN 363

Query: 386 RSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +A+  R +A  ++KY+ CK  PA  AEA+EC+GG+GY+EE  + R YRE+P  S+  
Sbjct: 364 GDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  + +     E  F  L+   G   +    +  L+ + +     +  AR
Sbjct: 424 GSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASLEHRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  ++ALA   A L R G   +AD F  +R      +    L    + A IID
Sbjct: 484 SVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIID 537


>gi|108763195|ref|YP_635424.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108467075|gb|ABF92260.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 558

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 190/517 (36%), Positives = 281/517 (54%), Gaps = 14/517 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP  +  +A+++D++L  ++A         +L   G  V+    Q+LA +AN N P+ 
Sbjct: 18  NQPPP-LEYDAWTTDTVLREVVAREGGGWAEADLAKYGP-VVGGEMQQLAFLANENKPKF 75

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPA+H L+   +  G+    W    +P     AH  R A  YL  
Sbjct: 76  RPFDRYGNRRDEVEFHPAYHRLMELGMAHGVSGFAWRNEDKP----GAHVARMALFYLHN 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q + G     ++T AS+ AL   P V  +W P++ S  YD       QK+   IG+G+TE
Sbjct: 132 QADNGTSCPLTMTYASVPALRHQPEVAMEWLPRVSSASYDSRFIPAAQKSGATIGMGMTE 191

Query: 205 KRGGTDIAAITSQGQKISDG-----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           K+GG+D+   T++  ++ +G      Y L GHKWF S+PMSDAF++LA  EG + CFL+P
Sbjct: 192 KQGGSDVRTNTTKAHRLGEGRGPGQPYALVGHKWFFSAPMSDAFLVLAHAEGGLSCFLMP 251

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLK+K+G+ SNA+ E+E    +  ++G        + +M  L   D
Sbjct: 252 RFTPDGALNAIRVQRLKDKLGDWSNASSEVELHGAYAVMVGAEGRGVPTILEMVALTRQD 311

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S   MR +L +AIH+ R R   G  LIDQP+M+  +AD+AL++ A  AL+ R++ +
Sbjct: 312 CMIGSSGQMRQALVQAIHHTRHRVAFGKRLIDQPLMRNVLADLALELEAHVALTGRVSRA 371

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D      +EAA+ RI   + KYW CK  P+ + EA EC+GG+GY+EE ++ R YR++P 
Sbjct: 372 VDATPRDEKEAAFCRIATAVGKYWVCKRTPSFVNEAQECLGGAGYVEETNLPRLYRQAPL 431

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-- 497
           NSI  GSGN   LDVL    +     E LF+ L    G          R    L   D  
Sbjct: 432 NSIWEGSGNIQCLDVLRAASREPASREALFAELLAAQGGHPAYDEATARLGKELANTDSL 491

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  +R + E +ALA  A+ L RAG   ++D F E+R 
Sbjct: 492 EVRSRTIVEGLALALQASLLIRAGNTAVSDAFCESRL 528


>gi|330908529|gb|EGH37048.1| alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli AA86]
          Length = 541

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/507 (36%), Positives = 276/507 (54%), Gaps = 9/507 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R    
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGTF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519
           L K  + L R ++ ++ L    A + +
Sbjct: 474 LRKPAEELGREISHQLFLLGCGAQMLK 500


>gi|283834806|ref|ZP_06354547.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC
           29220]
 gi|291069052|gb|EFE07161.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC
           29220]
          Length = 540

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 188/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+I          L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G+R D   FHPAWH L++    + +H   W    E   R+   
Sbjct: 59  GRLANAFPPELLRYDAQGQRLDDARFHPAWHLLMQGLCANRVHNLAW----EDDARQGTF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ +     P    DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGTLCPVTMTFAATPLLFQMLPAPFHDWLTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M
Sbjct: 235 LSCFFVPRFLPDGGRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGEEGEGIRHILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S   MR + + AI++A +R V G  LI+QP+M++ ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RENAKEALWARLFTPAAKFSICKSGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYDMLSEAFAEVKGQDRHYDRLVRQLQQH 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T+++ L    A + R     +A  + +
Sbjct: 474 LRKPSEELGREITQQLFLLGCGAQMLRYASPPVAQAWCQ 512


>gi|26991460|ref|NP_746885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24986536|gb|AAN70349.1|AE016676_9 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 550

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 197/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +   + +  AR LTE IALA  A  L  AG  D++D F+ +R 
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRL 521


>gi|149378325|ref|ZP_01896032.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357383|gb|EDM45898.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 567

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 285/538 (52%), Gaps = 13/538 (2%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQPP     N +  D +L  A+     +    +L+  G +  +     L   AN N P 
Sbjct: 28  FNQPPALEDYNLFEQDKALQEAVAREGAAAATSDLKQFGAFAGAADTIALGFHANENKPV 87

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            + +   G R D+V+FHPA+H L+  ++ +GLH S W           AH  R A+ Y+ 
Sbjct: 88  FNTHDRFGHRTDQVDFHPAYHQLMSAAMENGLHSSPWANP-----GAGAHVARTAKYYMH 142

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EA H    ++T A++ ++   P +   W  KI +  YDP N    +K SV IG+ +T
Sbjct: 143 SQIEAAHCCPITMTFAAVPSIRKQPELAAVWENKILANSYDPRNLPDSEKQSVTIGMAMT 202

Query: 204 EKRGGTDIAAITSQGQKI-SDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           EK+GG+D+ A T++   I ++G    Y L GHKWF+S+PM DAF++LAQ    + CFL+P
Sbjct: 203 EKQGGSDVRANTTRAYAIGAEGPGQAYELIGHKWFVSAPMCDAFLVLAQTRSGLSCFLMP 262

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N    QRLKNK+GN +NA+ E E      +++G+       + +M  +   D
Sbjct: 263 RWRPDGSKNPWQIQRLKNKMGNVANASSEAELRGAMAWMVGEEGRGVPTIIEMVAMTRFD 322

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S +GMR +LA+A H+ R R   GG L +QP+M+  +AD+AL+  AA A + R+A S
Sbjct: 323 CMIGSSAGMRQALAQASHHCRHRSAFGGRLSEQPLMQNVLADLALESEAALAYTMRVARS 382

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    E   AR+  P+ KYW CK  P    EAMECIGGSG +E+  + R  RESP 
Sbjct: 383 LDN-QHLEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLLRESPV 441

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           N+I  GSGN   LD L  L+K  +  +  F+   +  GS  +  + +  L++  +   + 
Sbjct: 442 NAIWEGSGNVQCLDTLRALQKEPDTLDAFFNEAAEARGSDARFDRFLAQLQNDFADISDF 501

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           +  AR L +++AL   ++ L R     +AD F  +R   N    +  L    N A II
Sbjct: 502 EYRARNLVDRLALLMQSSLLLRHSDPAVADAFCASRLEHNGGLNYGNLPSGTNPAAII 559


>gi|154245212|ref|YP_001416170.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154159297|gb|ABS66513.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 545

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 179/402 (44%), Positives = 258/402 (64%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L R+AN N P+LH++ P G R D VEFHPA+HAL+ +S+  GLHCS WD    P   ++ 
Sbjct: 57  LGRLANENPPELHSHDPQGRRCDVVEFHPAYHALMAQSMDAGLHCSSWDGPARPAEARRG 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +  RA RLY+++Q+EAGH+   ++T A+  +L   P + +D+ P+I +R YD       +
Sbjct: 117 NAQRATRLYVVSQVEAGHVCPLTMTHAAPASLAAAPELLRDFLPRIRARNYDGRFVPFWE 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K SV IG+ +TE++GGTD+ + T+Q   I    Y ++G KWFLS+PMSDAF++LAQ  G 
Sbjct: 177 KASVTIGMSMTERQGGTDVRSNTTQAVPIGGSEYEITGAKWFLSAPMSDAFLVLAQAPGG 236

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+PR   DGS NG+   RLK K+GNRSNA+ E+EF   F + +G+       +  M
Sbjct: 237 LTAFLMPRFRPDGSVNGVRLTRLKRKLGNRSNASCEVEFERAFAWRVGEEGRGIPTIIGM 296

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  LD A+ S   MR +LA A+H+AR R      L+DQP M   +AD+ALD  A  AL
Sbjct: 297 VQMTRLDCAVSSAGLMRAALARALHHARHRTAFQKKLVDQPAMAMVLADLALDQEAFAAL 356

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +FRLA SFDEA     EAA+AR++ P+ K+  CK APA IAE ME +GG+GY+E+ ++ R
Sbjct: 357 AFRLALSFDEANGSGTEAAHARVLTPVAKFAVCKAAPAFIAETMEVLGGNGYVEDCALPR 416

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            YRE+P N+I  GSGN M LD+  +  +  +L + + + L++
Sbjct: 417 LYREAPVNAIWEGSGNVMALDLARVAFREPDLVQAILANLKE 458


>gi|167994994|ref|ZP_02576084.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|16422938|gb|AAL23197.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205327231|gb|EDZ13995.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261249467|emb|CBG27332.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301160864|emb|CBW20396.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915475|dbj|BAJ39449.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|332991188|gb|AEF10171.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 540

 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK+    +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|320176387|gb|EFW51442.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella dysenteriae CDC 74-1112]
          Length = 541

 Score =  316 bits (810), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 188/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+ EK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMAEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|161353573|ref|NP_463238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267996709|gb|ACY91594.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323132714|gb|ADX20144.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 546

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 15  FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 75  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 130

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK+    +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 370 QRREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|158424026|ref|YP_001525318.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158330915|dbj|BAF88400.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 574

 Score =  315 bits (808), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 276/473 (58%), Gaps = 17/473 (3%)

Query: 24  ALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
             NQPP F  ++  + D+ L  AL A+ P   H  L   G    S     L R AN N P
Sbjct: 45  GFNQPPPFTDVDLLACDAALRDALGAHGPVPAH--LRSAGAEWGSRERMCLGRQANENPP 102

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +LH++   G+R D VEFHPA+HAL+  S   GLHC+ W        + + H  RAARLYL
Sbjct: 103 RLHSHDARGQRLDTVEFHPAYHALMAASSAGGLHCATW--------QGERHLHRAARLYL 154

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            AQ+EAGH+   ++T A+  AL   P +  +W  ++ SR YD       +KT+V +G+G+
Sbjct: 155 TAQVEAGHICPLTMTHAAPAALAAAPELQAEWLGRLTSRLYDGRFLPFWEKTAVTLGMGM 214

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GGTD+ A  ++  +     Y +SGHKWF S+PM DAF++LAQ    +  FL+PR  
Sbjct: 215 TEKQGGTDVRANVTRADRTGGSEYEISGHKWFFSAPMCDAFLVLAQAPEGLTTFLMPRFR 274

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DGS NGL  QRLK+K+GNRSNA+ E+EF   F + +G        + +M  L  LD A+
Sbjct: 275 PDGSVNGLRLQRLKDKLGNRSNASSEVEFDRAFAWRVGAEGRGVATILEMVQLTRLDCAV 334

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR +L+EA+H AR R V G  L+ QP M+  +AD+AL+  AATAL+ RLA SFD 
Sbjct: 335 SSAGLMRRALSEALHNARHRSVFGRRLVVQPAMRLVLADLALEAEAATALAMRLAASFDA 394

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A    +EAA AR++ P  K+  CK AP  I EAME +GG+GY+E+  + R +RE+P N+I
Sbjct: 395 AAGSPQEAARARLLTPAVKFAVCKAAPDFIYEAMEAVGGNGYVEDSPLPRLFREAPVNAI 454

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG------SSGKKVITILRD 489
             G+G  + LD+L    +       L   L ++ G      ++ ++V  +LRD
Sbjct: 455 WEGTGTVVALDLLRAAGRDPQAMALLLDDLGREAGGLPGVTATIRQVSGLLRD 507


>gi|311894642|dbj|BAJ27050.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 548

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 203/526 (38%), Positives = 285/526 (54%), Gaps = 8/526 (1%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   H  + +    NQ P   G +  +   LL  L          EL  LG    S  AQ
Sbjct: 1   MTASHPTATTHHVTNQAPPLTGHDVAADPVLLEGLDREGAGWHRAELHRLGRLAGSEQAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           + A  AN + P+L  +   G R D+VEFHPA+H L+  S+  GL  +      +P  R  
Sbjct: 61  QWADQANRHEPELRTHDRYGNRVDEVEFHPAYHHLMDLSVGAGLAGAA---WADP--RPG 115

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AH  RAA   +   LE GHL   S+T A + AL   P +   + P + SR YDP  +AP 
Sbjct: 116 AHVARAAGFMVATTLEPGHLCPVSMTYAVVPALRHAPELAAAYEPLLTSRTYDPGLRAPA 175

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K  +  G+G+TEK+GG+D+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G
Sbjct: 176 GKRGLLAGMGMTEKQGGSDVRANTTAAVRQADGSWRLRGHKWFTSAPMNDLFLVLAQAPG 235

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CFLVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+G        + +
Sbjct: 236 GLSCFLVPRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDDTAAWLVGAEGKGVRTIIE 295

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  LD  + S +G R +LA+A H+AR R   G +LIDQP+M+  +AD+AL+  AAT 
Sbjct: 296 MVTMTRLDCVLGSAAGTRAALAQAAHHARHRAAFGALLIDQPLMRNVLADLALESEAATT 355

Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L+ RLA + D A+   + E A  RI   + KYW CK  PA +AEA+EC+GG+GY E   +
Sbjct: 356 LALRLAGAADRAQHGDTGEKALLRIATAVAKYWVCKRQPAAVAEALECLGGNGYDEASGL 415

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
            R YRE+P NSI  GSGN   LD+   L +     + L + ++   G+  +       LR
Sbjct: 416 PRLYREAPLNSIWEGSGNVTALDLQRALVREPETLDALAAEIDLAAGADPRLDAAWHALR 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +    +    AR + E+ AL   AA L R     +AD F  +R 
Sbjct: 476 AELRPTPDAPLRARRVIERTALVLQAALLVRHAPAPVADAFCASRL 521


>gi|149917304|ref|ZP_01905803.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149821911|gb|EDM81305.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 561

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 192/530 (36%), Positives = 282/530 (53%), Gaps = 18/530 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP F G+N ++SD  L + +A      H + L   G  V S         AN   P+L
Sbjct: 17  NQPPAFEGVNLWASDRALRSAVAREGGAAHADALHGFGARVGSAEVTAWGFEANRARPEL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G+R D+V +HP++H L+  ++  G+    W  +  P      H   AA  ++MA
Sbjct: 77  LTFDRYGQRVDEVRYHPSYHRLMALAVEAGMPSVAWTEADTP----SGHVAHAAYEFMMA 132

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     S+T A + AL   P + +   PK+ +R YDP  K   +K  + +G+ +TE
Sbjct: 133 QAEPGVCCPLSMTYAVVPALRHEPALAEALVPKLSARVYDPEFKPMTEKAGLTMGMAMTE 192

Query: 205 KRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           K+GG+D+ A T+Q  ++  SD  Y L GHKWF S+PMSDAF+ LAQ  G + C LVPR  
Sbjct: 193 KQGGSDVRANTTQAHRLGGSDTDYELVGHKWFCSAPMSDAFLTLAQAPGGLTCLLVPRWR 252

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG+ N    QRLK+K+G+ +NA+ E+E++ T+   +G+       + +M     LD  +
Sbjct: 253 PDGTRNPFFIQRLKDKLGDHANASSEIEYAGTYARRVGEEGRGVRTIIEMVHHTRLDCIV 312

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M    +R ++A A  +A+ R   G  LIDQP+M+  +AD+ ++  AATAL+ R+A SFDE
Sbjct: 313 MPAGMLRQAVANACWHAQHRAAFGAKLIDQPLMREVLADLIVESEAATALAMRVARSFDE 372

Query: 383 A---KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A    +  E A AY+R+  P+ KYW  K  P  + EAMEC GG+GYIEE  + R +R+SP
Sbjct: 373 AGHDGAVGERARAYSRLATPVAKYWLNKRLPEAVYEAMECHGGAGYIEESVMPRLFRQSP 432

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
            NSI  GSGN + LDVL  + +  +    +   L    G   +    +  L D  +    
Sbjct: 433 LNSIWEGSGNVICLDVLRAMGREPSCVAAVLEELNASRGGDPRYDAFVAALEDRFARVGR 492

Query: 497 D---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN--CHST 541
           +      AR L E++ LA  AA L R G   +AD F   R      C+ T
Sbjct: 493 EPVHPREARQLCERLGLALQAAVLVRHGEPAVADAFCAGRLAGEGRCYGT 542


>gi|148549858|ref|YP_001269960.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148513916|gb|ABQ80776.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 550

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNIGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +   + +  AR LTE IALA  A  L  AG  +++D F+ +R 
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNTEVSDAFIGSRL 521


>gi|325276233|ref|ZP_08142029.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324098633|gb|EGB96683.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 550

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/526 (37%), Positives = 285/526 (54%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--RPGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGSGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVILGMAMTEKQGGTDVRANTTRAYSVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D S N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQATHHCAYRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++ +   ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQLED-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R 
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNALVSDAFIGSRL 521


>gi|82779433|ref|YP_405782.1| isovaleryl CoA dehydrogenase [Shigella dysenteriae Sd197]
 gi|81243581|gb|ABB64291.1| putative acyl coenzyme A dehydrogenase [Shigella dysenteriae Sd197]
          Length = 542

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 188/521 (36%), Positives = 280/521 (53%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +   +LL         + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|332283648|ref|YP_004415559.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Pusillimonas sp. T7-7]
 gi|330427601|gb|AEC18935.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Pusillimonas sp. T7-7]
          Length = 546

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/521 (36%), Positives = 283/521 (54%), Gaps = 22/521 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N Y+SD  L   +    +  H++ L+  GE +       +A+ AN + P+L
Sbjct: 10  NQVPELGDYNLYTSDIALQEGVRREGAQSHEDALQHYGERLGRAETFAMAQEANRHKPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             Y   G R D+V FHP+W   +R +   G+H S W         K AH  RAA   +  
Sbjct: 70  ETYDRLGHRVDRVRFHPSWCRFMRMAFLQGMHSSAWS-----APGKGAHVARAATYLMHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDW----APKIFSREYDPTNKAPMQKTSVAIGL 200
           QLEAG L   ++TSA++  L       + W    AP ++S  YD  +   + KTS+ IG+
Sbjct: 125 QLEAGSLCPVTMTSAAIPVLK-----QESWFDTLAPLLYSSRYDERDLPLVDKTSMLIGM 179

Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++   +  G     Y L+GHKWF SSP SDA ++LA  +    CF
Sbjct: 180 GMTEKQGGSDLRSNTTRAVALGTGGRGMPYHLTGHKWFFSSPTSDAHLVLAGHDDVFSCF 239

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR L+DG+ N +  QRLKNK+GN SNA+ E+EF +  G L+G+       + +M    
Sbjct: 240 YVPRWLDDGNRNSVHIQRLKNKMGNASNASAEVEFQDATGVLVGEAGRGIATLVEMASYT 299

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S + +R  + +A+H+AR R   G  L +QP+M+  + D++L+  AAT L+ RL
Sbjct: 300 RLDCVLGSAALLRQGVVQALHHARHRVAFGQALSEQPLMQSVLMDLSLESEAATVLALRL 359

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +FD       E AY RI+ P  K+W CK   A + E ME  GG+GYIE+  +AR YRE
Sbjct: 360 ARAFDNDGHDPLEQAYRRILTPAAKFWICKRTIAALGECMEVWGGNGYIEDAPMARLYRE 419

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISL 493
           +P NSI  GSGN M LDVL  L++   L   +  +L++D        ++V ++L      
Sbjct: 420 APVNSIWEGSGNVMCLDVLRGLKRHPELAAVMLESLQRDCADEPMLKQRVASLLSLLTLA 479

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             + +  AR + +++ L   A+ L R     +AD F+ +RF
Sbjct: 480 GPDQEAAARHIAQELVLLVQASLLRRHAPPVLADAFIHSRF 520


>gi|269126024|ref|YP_003299394.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310982|gb|ACY97356.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 543

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 194/535 (36%), Positives = 282/535 (52%), Gaps = 9/535 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ P     +     +LL  L          E+  LG    +  AQE  R+AN   P L
Sbjct: 8   FNQAPPLEDYDLADDPALLEGLEREGAGWASAEVHELGRLAGTRRAQEWGRLANEYPPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VE+HPAWH L+  ++  GLH + W  S     R+ AH  RAA+ Y+  
Sbjct: 68  RTHDRYGHRIDEVEYHPAWHELMTVAVTHGLHAAPWADS-----REGAHVARAAKFYVW- 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +++AGH    S+T + + AL   P +   + P +  R YD   + P+ K ++  G+ +TE
Sbjct: 122 RVDAGHGCPISMTYSVVPALRHNPELAAQYEPLLVQRTYDFGLRPPLTKAALLAGMSMTE 181

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T+      DG Y L GHKWF S+PM D F++LAQ  G + CFL+PR+L D
Sbjct: 182 KQGGSDVRANTTTATPQPDGSYRLVGHKWFTSAPMCDIFLVLAQAPGGLTCFLLPRVLPD 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N +   RLK+K+GNRSNA+ E+E+ +   + +G+       + +M     LD  I +
Sbjct: 242 GSLNPMRIMRLKDKLGNRSNASSEIEYEDAVAWRVGEEGRGVRTIIEMVNSTRLDCLIGA 301

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383
            +GMR  +  A H+A  R   G  LIDQP+M+  +AD+A++  AAT L  RLA + D A 
Sbjct: 302 AAGMRQGVTVAAHHAAHRKAFGAYLIDQPLMRNVLADLAVESEAATTLMMRLAGAADRAI 361

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EAA+ R+   + KYW  K  PA  AEA+EC+GG+GY EE  + R +RESP NSI 
Sbjct: 362 RGDAAEAAFKRLALAVGKYWVTKRWPAHAAEALECLGGNGYAEESGMPRLFRESPLNSIW 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKEDKGLA 501
            GSGN   LD L  + K     E  F+ +EQ  G+       I R  DS++     +   
Sbjct: 422 EGSGNVAALDALRAMAKQPQCLEAFFAEVEQAAGADRHLDAAIRRAKDSLTDTATLELRT 481

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E + L   A+ L R G   +AD F  +R   +       L    +   II+
Sbjct: 482 RRVAELLTLVLQASLLVRYGHPAVADAFCVSRLGGDWGGAFGTLPAGLDLGPIIE 536


>gi|161501903|ref|NP_458811.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
          Length = 546

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 15  FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 75  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 130

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|213428656|ref|ZP_03361406.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213612677|ref|ZP_03370503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|289829967|ref|ZP_06547418.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25513441|pir||AI1050 probable acyl Co-A dehydrogenase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16505502|emb|CAD06854.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi]
          Length = 540

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|325676593|ref|ZP_08156271.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552771|gb|EGD22455.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 545

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 191/534 (35%), Positives = 292/534 (54%), Gaps = 8/534 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  I  +A     +L AL          E+  +G       AQ L  +A  + P L 
Sbjct: 9   NQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAHPPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VE+ PA+H L+  ++  GLH + W    +P  R QAH IRAA+  +  Q
Sbjct: 69  THDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPW---ADP--RPQAHLIRAAKNAVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           ++AGH    S+T A + AL   P +   + P + ++ YDP  +AP+ K  +  G+ +TEK
Sbjct: 124 VDAGHGCPISMTYAVVPALRHDPELALQYEPLLTAKVYDPELRAPLTKPGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T++     DG Y ++GHKWF S+PMSD F++LAQ  G + CFL+PR+L DG
Sbjct: 184 QGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPRILPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N +  QRLK+K+GN SNA+ E+E+ +   + +GD       + +M  +  LD  I + 
Sbjct: 244 SRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDCTIGTA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GMR+ +A+A H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   D A +
Sbjct: 304 TGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHADN 363

Query: 386 RSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +A+  R +A  ++KY+ CK  PA  AEA+EC+GG+GY+EE  + R YRE+P  S+  
Sbjct: 364 GDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LDVL  + +     E  F  L+   G   +    +  L+ + +     +  AR
Sbjct: 424 GSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASLEHRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  ++ALA   A L R G   +AD F  +R      +    L    + A IID
Sbjct: 484 SVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIID 537


>gi|226363576|ref|YP_002781358.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242065|dbj|BAH52413.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 561

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 187/538 (34%), Positives = 286/538 (53%), Gaps = 8/538 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           +NQ P  I  +A     +L AL         +EL  +G    S  AQ    +A  + P L
Sbjct: 8   VNQVPPLINFDAADYAPILEALQREGAHDALEELHDVGRLAGSEEAQRWGDLAEAHPPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VE+ PA+H L+  ++  GLH + W    +P     AH +RAA++ +  
Sbjct: 68  RTHDRYGNRIDEVEYDPAYHRLMTTAVEMGLHGAPW---ADP--HPHAHLVRAAKMAVWG 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q++AGH    S+T A + AL     + + + P + +R YDP    P+ K  +  G+ +TE
Sbjct: 123 QVDAGHGCPISMTYAVVPALRHNRALAEQYEPLLTARVYDPALHPPLTKAGLIAGMSMTE 182

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++    +DG Y L+GHKWF S+PMSD F++LAQ  G + CF +PR+L D
Sbjct: 183 KQGGSDVRAGTTRAVPQADGSYVLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  LD  I +
Sbjct: 243 GTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRLDCTIGT 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +GMRV  A+A H+A  R   G  L+DQP+M+  +AD+A++  AAT ++  LA   D A 
Sbjct: 303 ATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAALTDRAT 362

Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  E A    RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+P  S+ 
Sbjct: 363 AGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVW 422

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501
            GSGN   LD L  + K     +  F  L+   G+  +    +  L+ S          A
Sbjct: 423 EGSGNVAALDTLRAMAKQPETLQVFFDELDASAGADTRLDAAVAHLKSSFGDVDTLAHRA 482

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           R +   +ALA   + L R G   +AD F  +R   +  S    L    + A II+  +
Sbjct: 483 RRVVGDMALALQGSLLVRHGHPAVADAFCVSRLGGDWGSVFGTLPTGVDTAAIIERAF 540


>gi|229494713|ref|ZP_04388471.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229318380|gb|EEN84243.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 563

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 197/537 (36%), Positives = 286/537 (53%), Gaps = 31/537 (5%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N +  D++LV  +A   +     EL  +GE V S   Q  A +
Sbjct: 14  PHRTHAVLNQSVPRTDVNEFVLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W    +P  +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L +Q+E GH    S+T A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAAIWTPRALSRSYTPELDAP-GKASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 AGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  +  +E A+ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATITALRLARAQDE-DANEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL----------EKGTNLFEQLFSTLEQDLGS 478
            +AR YRE P  ++  GSGN + LDVL  +          ++  NL       L+Q L  
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDREINLARGNNPVLDQHL-- 484

Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              +V   L +  ++   D    AR + E +ALA  A+ + R      +D F+  R 
Sbjct: 485 --DRVRRQLGELATMAPADAQFRARTVVEAMALALQASLMVRHSPAASSDAFIAARL 539


>gi|261342843|ref|ZP_05970701.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus
           ATCC 35316]
 gi|288314886|gb|EFC53824.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 540

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/509 (36%), Positives = 280/509 (55%), Gaps = 13/509 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71
           +H  + ++F  NQP      N + SD  L   +A        +++LL   G+ + +  + 
Sbjct: 1   MHWQTHTVF--NQPSPLSNSNLFLSDCALRDAVAR--EGAEWDMDLLASIGQQLGTAESL 56

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W    E   RK 
Sbjct: 57  ELGRLANVNPPELLRYDAMGGRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARKG 112

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +   RAAR  L AQ+EAG L   ++T +A+ + L   P+  + W   +    YDP     
Sbjct: 113 SFVARAARFVLHAQVEAGTLCPITMTFAATPLLLQALPKPFESWRNPLLGDRYDPHLAPG 172

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +
Sbjct: 173 GQKRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAK 232

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       + 
Sbjct: 233 GGLSCFFVPRFLLDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQIL 292

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S   MR +L+ A+++A +R   G  LIDQP+M+  ++ +AL +   T
Sbjct: 293 KMGGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMREVLSRMALVLEGQT 352

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D+ ++  +E A+AR+  P  K+  CK     +AEAME +GG+GY E+  +
Sbjct: 353 ALLFRLARAWDK-RADPQEMAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGTGYCEDNEL 411

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   + + L     Q  G       +  +  
Sbjct: 412 PRLYREMPVNSIWEGSGNIMCLDVLRVLTKQPGMLDLLSDDFAQVKGQDRHFDRSWRQLQ 471

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519
             L K  +   R +  +++L  + + + R
Sbjct: 472 QKLRKPQEAQGREIARQLSLLGAGSQMLR 500


>gi|256784373|ref|ZP_05522804.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289768252|ref|ZP_06527630.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289698451|gb|EFD65880.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 557

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/550 (35%), Positives = 285/550 (51%), Gaps = 27/550 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYN 80
           NQ P   G + ++SD  LV  +   P+   +E     L  LG    S   QE    AN +
Sbjct: 10  NQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWGAQANAH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHPAWH LL + +  GL    W R          H  RAA  
Sbjct: 70  PPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL-TDAWSR-------PGGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG+    S+T A++ AL   P +  +W P++ SR YD   +    K  V  G+
Sbjct: 122 LMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKAGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252
           G+TEK+GG+D+ A ++  + ++ DG Y L+GHKWF S+PMSD F++LA+        EG 
Sbjct: 182 GMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGTVRAEGN 241

Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G   CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF+ T+   +G        +
Sbjct: 242 GGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEGRGVPTI 301

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM     LD  + S   MR ++A+A+H+   R   G  L DQP+M+  +AD+A++  AA
Sbjct: 302 IDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLAVESEAA 361

Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           T L  RLA + D A    E E A  R+  P  KYW  K    V+ EA EC+GG+GY+EE 
Sbjct: 362 TTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGNGYVEES 421

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R  RESP NS+  G+GN   LDVL  L +     +   + +    G+  +    I  
Sbjct: 422 GLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRLDAAIRG 481

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           L   ++     +G AR L E++AL    A L R    ++AD F  +R   +  +    L 
Sbjct: 482 LLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGAAFGTLP 541

Query: 547 GRFNAAHIID 556
              + A +++
Sbjct: 542 PTLDLAAVVE 551


>gi|167035823|ref|YP_001671054.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166862311|gb|ABZ00719.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 550

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 195/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHVLMRTAVEHGLPSLPW---AEP--RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFTELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R 
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNAVVSDAFIGSRL 521


>gi|302539970|ref|ZP_07292312.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302457588|gb|EFL20681.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 508

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 179/482 (37%), Positives = 265/482 (54%), Gaps = 13/482 (2%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +G    S   Q+ ARMA  + P LH +   G R D+VE+HPA+H L+  ++  G H + W
Sbjct: 1   MGARAGSAEVQDWARMAEEHHPVLHTHDRYGHRIDEVEYHPAYHQLMTAAVESGQHAAAW 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +     R   H  RAA  Y  AQ E GH    S+T A++ AL   P +   + P + +
Sbjct: 61  AET-----RPGRHLARAATFYAFAQAEPGHGCPISMTYAAVPALRAEPELAAAYEPLLTA 115

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSP 238
           R YD   +AP+ K  +  G+ +TEK+GG+D+ A T++    S  DG Y L+GHKWF S+P
Sbjct: 116 RTYDFGLRAPLTKRGLIAGMSMTEKQGGSDVRANTTEAVPSSADDGTYLLTGHKWFTSAP 175

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           MSD F+ LAQ    V CFLVPR+L DG+ N L  QRLKNK+GNR+NA+ E+E+     + 
Sbjct: 176 MSDVFLTLAQAPEGVTCFLVPRVLPDGTRNALHLQRLKNKLGNRANASSEVEYDRAVAWR 235

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + +M  +  LD  I S +GMR  L +A+H+   R   G  LIDQP+M+  
Sbjct: 236 IGEPGRGVRTIVEMVSVTRLDCVIGSAAGMRAGLRQALHHCEHRRAFGAELIDQPLMRNV 295

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAME 417
           +AD+A++  AAT L+ RLA + D A++     A  R +   ++KYW CK      AEA+E
Sbjct: 296 LADLAVESEAATTLAMRLATALDRAEAGDAGEAALRRLGLAVSKYWVCKRGATHAAEALE 355

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL----- 472
           C+GG+GY+E+  + R YRE+P  SI  GSGN   LDVL  L++ T   + + + +     
Sbjct: 356 CLGGNGYVEDSGMPRLYREAPLQSIWEGSGNVAALDVLRALDRETGALDAVLAEVDAAAG 415

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
                 +    +  L   ++  +  + LAR L E++ L    + L R     +AD F  +
Sbjct: 416 ADARLDAAAARLRALLPQLADPQRAQVLARRLAEQMTLVLQGSLLVRYSHPAVADAFCAS 475

Query: 533 RF 534
           R 
Sbjct: 476 RL 477


>gi|121604749|ref|YP_982078.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593718|gb|ABM37157.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 550

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/446 (39%), Positives = 257/446 (57%), Gaps = 17/446 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP   +  N +  +  L  AL  N P +    L  LG  + +   Q  AR+AN + P+
Sbjct: 8   FNQPEPLVNYNLFEGNQPLRDALKFNAPGLDTAGLMQLGARLGTADMQTHARLANVHAPE 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   G R D+VEFHP++HAL+  ++  GLH + W     P      H  RAA   L 
Sbjct: 68  LHTHDRFGRRIDQVEFHPSYHALMTEAVGAGLHGTPWAHHESP----SPHVERAAGFMLF 123

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +LE   L   S+T A   AL   P ++ DW+P + SR+YDP  K    K  V +G+G+T
Sbjct: 124 TELEPSSLCPISMTYAVTPALRGNPAIYADWSPGLTSRQYDPMLKVWSDKPGVTMGMGMT 183

Query: 204 EKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           EK+GG+D+ A T++   + DG       + ++GHKWF S+PM DAF++LAQ    + C  
Sbjct: 184 EKQGGSDVRANTTRA--VPDGTDGWGQRFAVTGHKWFFSAPMCDAFLILAQAPAGLSCLF 241

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR+L DGS N +  QRLK+K+GN++NA+ E+EFS    +L+G+       +  M  +  
Sbjct: 242 LPRVLPDGSLNAIRIQRLKDKLGNKANASSEVEFSAASAWLVGEEGRGVPQILAMGSMTR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ +   MR +L+ A+++  +R   G  LI QP+M+  +AD+A++  AA ALS RLA
Sbjct: 302 LDCALGTSGLMRQALSLALNHTAQRSAFGQPLIGQPLMRNVLADLAIESEAACALSIRLA 361

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHY 434
             FD  ++ +   A +R++ P+ K+W CK   A   EAMEC+GG+GY+EE     +AR Y
Sbjct: 362 RCFDH-QNDAHGQALSRLLTPVAKFWICKRGSAFAQEAMECLGGNGYVEEGGEGIMARIY 420

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           RE P NSI  G+GN M LD+L  L K
Sbjct: 421 REMPVNSIWEGAGNIMALDLLRALRK 446


>gi|104783742|ref|YP_610240.1| acyl-CoA dehydrogenase AidB [Pseudomonas entomophila L48]
 gi|95112729|emb|CAK17457.1| putative acyl-CoA dehydrogenase (AidB) [Pseudomonas entomophila
           L48]
          Length = 551

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 197/530 (37%), Positives = 285/530 (53%), Gaps = 21/530 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCT 69
           +HQ +++    NQPP   G N Y  D  L      F      S +     L G  +++  
Sbjct: 3   LHQFAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMTA- 61

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                 +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W    EP  R
Sbjct: 62  ----GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--R 112

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH  RA+  YL +Q EAG     ++T A++ AL   P +   W PKI +REYDP N  
Sbjct: 113 AGAHVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPALAGYWLPKILAREYDPRNIG 172

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIM 245
              K  V +G+ +TEK+GGTD+ A T++    G       Y L GHKWF S+PM DAF+ 
Sbjct: 173 DRHKAGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQPYELVGHKWFCSAPMCDAFLT 232

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           LAQ +  + CFL+PR   D   N    QRLKNK+GN SNA+ E+EF     +++G+    
Sbjct: 233 LAQTDKGLSCFLLPRHRPDDQRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRG 292

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+
Sbjct: 293 VPTIIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALE 352

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA ALS R+  + D+     ++A ++R++  + KYW CK AP +I EA EC+GG+GY+
Sbjct: 353 SEAALALSLRMCQALDQLDD-PQQAHFSRLVTAVGKYWICKRAPGMINEAAECLGGAGYV 411

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVI 484
           E+  + R YRE+P NS   GSGN   LDVL  L K   + + LFS L    G +     I
Sbjct: 412 EDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFSELGDGHGDARLAAFI 471

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             L+ + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R 
Sbjct: 472 GNLKGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNATVSDAFIGSRL 521


>gi|21224435|ref|NP_630214.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|13276833|emb|CAC33951.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 557

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 196/550 (35%), Positives = 285/550 (51%), Gaps = 27/550 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYN 80
           NQ P   G + ++SD  LV  +   P+   +E     L  LG    S   QE    AN +
Sbjct: 10  NQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWGAQANAH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHPAWH LL + +  GL    W R          H  RAA  
Sbjct: 70  PPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL-TDAWSR-------PGGHVRRAAAF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+EAG+    S+T A++ AL   P +  +W P++ SR YD   +    K  V  G+
Sbjct: 122 LMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKAGVLFGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252
           G+TEK+GG+D+ A ++  + ++ DG Y L+GHKWF S+PMSD F++LA+        EG 
Sbjct: 182 GMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGTARAEGN 241

Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G   CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF+ T+   +G        +
Sbjct: 242 GGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEGRGVPTI 301

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM     LD  + S   MR ++A+A+H+   R   G  L DQP+M+  +AD+A++  AA
Sbjct: 302 IDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLAVESEAA 361

Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           T L  RLA + D A    E E A  R+  P  KYW  K    V+ EA EC+GG+GY+EE 
Sbjct: 362 TTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGNGYVEES 421

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R  RESP NS+  G+GN   LDVL  L +     +   + +    G+  +    I  
Sbjct: 422 GLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRLDAAIRG 481

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           L   ++     +G AR L E++AL    A L R    ++AD F  +R   +  +    L 
Sbjct: 482 LLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGAAFGTLP 541

Query: 547 GRFNAAHIID 556
              + A +++
Sbjct: 542 PTLDLAAVVE 551


>gi|114320872|ref|YP_742555.1| acyl-CoA dehydrogenase domain-containing protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227266|gb|ABI57065.1| acyl-CoA dehydrogenase domain protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 559

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 176/459 (38%), Positives = 254/459 (55%), Gaps = 11/459 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP     N Y  D+ L   +  +        L   G +       EL   AN   P+L
Sbjct: 22  NQPPPLQAYNLYRQDAALREGVHRYRAGWAEAGLVRQGAWAGRPEVIELGFQANEQPPRL 81

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+V +HPA+H L+RR++  GLH + W R+  P     AH  RAAR YL A
Sbjct: 82  HTHDRFGHRVDEVRYHPAYHRLMRRALTQGLHAAPW-RNPGP----GAHVARAARYYLQA 136

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    ++T A++ AL   P +   W  K+ + +YDP N     K +V IG+ +TE
Sbjct: 137 QVEAGHGCPVTMTFAAVPALRRQPDLAASWLDKLLALDYDPRNCPVAAKKAVTIGMAMTE 196

Query: 205 KRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GG+D+ A T++    G       Y L GHK+F+S+PMSDAF++LAQ +  + CFL+PR
Sbjct: 197 KQGGSDVRANTTRAYPLGTPGPGEAYELVGHKYFVSAPMSDAFLVLAQTDAGLSCFLLPR 256

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG  N L  Q+LK K+GN +NA+ E E      +++G+       + DM  +   D 
Sbjct: 257 WRPDGGRNPLQIQQLKRKMGNVANASSETELRGALAWMVGEPGRGVRTIIDMVAMTRYDC 316

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S +G+R +  +A+H+ R R   GG L+DQP+M   +AD+AL+  AA  ++ RLA + 
Sbjct: 317 TIGSAAGLRQAAVQALHHCRHRRAFGGRLVDQPLMANLLADLALESEAALQVALRLAGAL 376

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  E+A + R+  P+ KYW CK  P    EAME IGGSG +E+  + R +RESP N
Sbjct: 377 DRPDAPREQALF-RLATPVAKYWVCKRTPGHAYEAMEAIGGSGVMEDCILPRLFRESPIN 435

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           +I  GSGN   LDVL  +EK  +  +     LE+  G+ 
Sbjct: 436 AIWEGSGNIQCLDVLRAVEKAPDTLDAFLDELERARGAD 474


>gi|307731335|ref|YP_003908559.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307585870|gb|ADN59268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 569

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 199/553 (35%), Positives = 293/553 (52%), Gaps = 33/553 (5%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67
           +R +  Q H+ +      NQ P     N +S+D  L   +    +  H++  L     LS
Sbjct: 2   QRHSFGQTHEVT------NQVPPLADYNLFSTDVALANALERDGAAWHRDALLRHGAALS 55

Query: 68  CTAQ-ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
                 LA +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +    +P
Sbjct: 56  TPDTLALAELANRHTPELVTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP 112

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +  A   R A  +L AQ+E+G L   ++T AS+  L   P++      K+++R +DP 
Sbjct: 113 --QPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYARGHDPR 170

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242
           +    QK S  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA
Sbjct: 171 DLPLAQKHSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELIGHKWFFSAPQCDA 230

Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            ++LA+    VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++G
Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           D       + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +A
Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLA 350

Query: 361 DIALDIAAATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMA 408
           D+AL+  AAT L  RLA +F++            + +   E A+ RI+ P  KYW CK  
Sbjct: 351 DLALESEAATVLFMRLARAFEQSADAAPASSAASSTATLAERAWRRIVTPAAKYWVCKRT 410

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                EAME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + L
Sbjct: 411 LEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQAL 470

Query: 469 FSTLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           F+  + D  +       + + + +L    +  +  AR + ++I L + A  L       +
Sbjct: 471 FAQWQADAAAHPALGAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVAHAPAAV 530

Query: 526 ADVFLENRFLDNC 538
           A+ F+  R  D C
Sbjct: 531 AEAFIATRLADGC 543


>gi|309787690|ref|ZP_07682301.1| protein aidB [Shigella dysenteriae 1617]
 gi|308924440|gb|EFP69936.1| protein aidB [Shigella dysenteriae 1617]
          Length = 537

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 187/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +   +LL         +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|194442803|ref|YP_002043631.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194401466|gb|ACF61688.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 540

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       V  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHVLKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|330987628|gb|EGH85731.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 549

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +      E   +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEMWLPKVLSTEYDPRNVGIAHKRGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|168464739|ref|ZP_02698642.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195632759|gb|EDX51213.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 540

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGGGAEMLRHASPPLAQAWCQ 512


>gi|226309402|ref|YP_002769362.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188519|dbj|BAH36623.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 563

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 194/533 (36%), Positives = 285/533 (53%), Gaps = 23/533 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N +  D++LV  +A   +     EL  +GE V S   Q  A +
Sbjct: 14  PHRTHAVLNQSVPRTDVNEFQLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W    +P  +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L +Q+E GH    S+T A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAALWTPRALSRSYTPELDAP-GKASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 AGEGLSCFLLPRILPDGTRNIFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  +  +E A+ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATITALRLARAQDE-DADEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KK 482
            +AR YRE P  ++  GSGN + LDVL  + +  +        +    G++        +
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDHEVNLARGNNPVLDHHLDR 486

Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           V   L +  ++   D  L AR + E +ALA  A+ + R      +D F+  R 
Sbjct: 487 VRRQLGELATMAPADAQLRARTVVEAMALALQASLMVRHSPAASSDAFIAARL 539


>gi|207859522|ref|YP_002246173.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206711325|emb|CAR35703.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 540

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|238910535|ref|ZP_04654372.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 540

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|322615539|gb|EFY12459.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618599|gb|EFY15488.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322621988|gb|EFY18838.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627712|gb|EFY24503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631019|gb|EFY27783.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637762|gb|EFY34463.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642426|gb|EFY39030.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644005|gb|EFY40553.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650919|gb|EFY47304.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653563|gb|EFY49891.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659748|gb|EFY55991.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662041|gb|EFY58257.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666210|gb|EFY62388.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672630|gb|EFY68741.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676060|gb|EFY72131.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680544|gb|EFY76582.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684562|gb|EFY80566.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192877|gb|EFZ78103.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197247|gb|EFZ82387.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201636|gb|EFZ86700.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206150|gb|EFZ91112.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213158|gb|EFZ97960.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215532|gb|EGA00276.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219517|gb|EGA04002.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323227820|gb|EGA11974.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228990|gb|EGA13119.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236398|gb|EGA20474.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238697|gb|EGA22749.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323241852|gb|EGA25881.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247999|gb|EGA31936.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254670|gb|EGA38481.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258271|gb|EGA41948.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263583|gb|EGA47104.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265821|gb|EGA49317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270265|gb|EGA53713.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 540

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKTLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|167717592|ref|ZP_02400828.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
          Length = 472

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 181/453 (39%), Positives = 259/453 (57%), Gaps = 14/453 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 19  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 79  ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 134 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 193

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 194 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 253

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 254 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 313

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 314 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 373

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 374 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 433

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           +P NSI  GSGN M +DVL  +E+  +    LF
Sbjct: 434 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALF 466


>gi|197249522|ref|YP_002149291.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197213225|gb|ACH50622.1| protein AidB [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
          Length = 540

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|168822494|ref|ZP_02834494.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205341093|gb|EDZ27857.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320088803|emb|CBY98561.1| Protein aidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 540

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLNEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|289625806|ref|ZP_06458760.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289648411|ref|ZP_06479754.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330867201|gb|EGH01910.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330871089|gb|EGH05798.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 549

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +      E   +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQAAHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|168245165|ref|ZP_02670097.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194448363|ref|YP_002048419.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194406667|gb|ACF66886.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205336072|gb|EDZ22836.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 540

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 184/509 (36%), Positives = 277/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEECELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL  L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRGLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|161617648|ref|YP_001591613.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161367012|gb|ABX70780.1| hypothetical protein SPAB_05511 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 540

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|167553775|ref|ZP_02347521.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205321868|gb|EDZ09707.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 540

 Score =  312 bits (800), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|71737641|ref|YP_276496.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558194|gb|AAZ37405.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320330538|gb|EFW86517.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330873632|gb|EGH07781.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 549

 Score =  312 bits (800), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 189/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +      E   +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    +G+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATLGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|198244552|ref|YP_002218260.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939068|gb|ACH76401.1| protein AidB [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
          Length = 540

 Score =  312 bits (800), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|319951106|ref|ZP_08024959.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435266|gb|EFV90533.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 545

 Score =  312 bits (800), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 186/521 (35%), Positives = 284/521 (54%), Gaps = 17/521 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ P  + ++ Y+ +  L   +A F P    +    +G +V +   Q  A +AN +TP 
Sbjct: 13  LNQAPPRVDVDEYALNPALQEAVAVFSPHARVERFHEIGRHVGTEQYQHDAELANTHTPV 72

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            H++   G R D++EFHP++H ++  S+  GLH S W    +P   + A+  RAA   L+
Sbjct: 73  HHSHDRWGNRVDEIEFHPSYHRIMEYSVAHGLHTSAW---ADP--GQGANVERAAGFMLV 127

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EAGH    S+T A + +L  +P +  +W P + S  YDP  + P  K+ V  G+ +T
Sbjct: 128 SQVEAGHGCPLSMTHAVVPSLRLSPELAAEWEPALLSTVYDPELRDPATKSGVLFGMAMT 187

Query: 204 EKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           EK+GG+D+ A T+  + + DG  + L GHKWF S+P SDAF++LAQ    + CFLVPR+L
Sbjct: 188 EKQGGSDVRANTTTAEPVGDGDCHVLRGHKWFCSAPQSDAFLVLAQAPEGLSCFLVPRVL 247

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N    QRLK+K+GN+SNA+ E+EF  T G+++G+       + +M     LD  +
Sbjct: 248 PGGERNPFLVQRLKDKLGNKSNASSEVEFDGTLGWMVGEPGRGVRTIIEMVGRTRLDCVL 307

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +GMR  +AEA  +AR R   G  L+DQP M   +AD+ L+  AAT  + RLA+++D 
Sbjct: 308 GAAAGMRQGVAEAAWHARHRAAFGATLVDQPAMAAVLADLQLESEAATWTALRLASAYDN 367

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                E A Y R+   + KYW CK  P    E++EC+GG+GY E   +AR YRE P  ++
Sbjct: 368 ----EEFAPYRRLATAVAKYWVCKRGPNHAYESLECLGGNGYTEAFPLARRYREQPVLAV 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKE 496
             GSGN + LDVL  + +         + L   LG         ++V  ++  + +    
Sbjct: 424 WEGSGNVIALDVLRAMTREPESVAAFDAELAAQLGGHELYDRHVERVRALIGRAAADPGA 483

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
             G+AR L E +ALA   A L       +A+ F   R  D+
Sbjct: 484 APGIARRLVEAMALAQQGAVLLAHAPAPVAEAFCLARLGDD 524


>gi|168263270|ref|ZP_02685243.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|205347910|gb|EDZ34541.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 540

 Score =  312 bits (800), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|326330029|ref|ZP_08196343.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325952237|gb|EGD44263.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 551

 Score =  312 bits (800), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 191/536 (35%), Positives = 286/536 (53%), Gaps = 9/536 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           SD     NQ P   G N  + D+ L  A++ +        L  LG    S  AQE  R+A
Sbjct: 4   SDIRRVTNQAPPLAGHNVVTGDAALSAAVLRHADEETLDSLVSLGAEAGSAEAQEHGRLA 63

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L  Y   G R D+V FHP+WH L+ R++  GL  + W  +        AH  RA
Sbjct: 64  NRFHPELVPYDRYGNRIDEVSFHPSWHWLMERAVGHGLAAAPWAPAGAGDEAGHAHVRRA 123

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A     +Q E GHL   S+T A++ AL     +  +W P++ S  YD   + P +K    
Sbjct: 124 AGFLAWSQTEPGHLCPISMTYAAVPALRADESLAAEWVPRLASTIYDFGLRDPAEKLGAL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GG+D+    ++ + +   +Y L GHKWF S+PM+D F++LAQ    + CFL
Sbjct: 184 AGMGMTEKQGGSDVRQNITEARPLGGDVYELHGHKWFTSAPMNDVFLVLAQAPDGLTCFL 243

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR+L  G  N L   RLK+K+GNRSNA+ ELE   T  + LG        + +M     
Sbjct: 244 LPRVLPGGERNRLDVVRLKDKLGNRSNASAELELRGTTAYRLGAEGRGVRTIIEMVAATR 303

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S + MR ++AEA  +   R   GG L D+P+M+  +AD+A++  AATAL+ RLA
Sbjct: 304 LDCVLGSAALMRRAVAEASWHVAHRSAFGGTLADKPLMQNVVADLAVESEAATALAMRLA 363

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D      E+ A  RI  P+ K+W CK  PA +AEA+EC+GG+GY+EE  +   +RES
Sbjct: 364 AAVDRPDDLHEQ-ALRRIGLPLAKFWVCKRTPAHVAEALECLGGNGYVEESVMPLLFRES 422

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITILRDSI 491
           P NS+  GSGN   LDVL  +++  ++ +   + +    G+  +        + +L +S+
Sbjct: 423 PLNSVWEGSGNVNALDVLRAIQREPSVLDAWITEVGSAKGADRRYDRAVDSTLALLGESM 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              +E +  AR L   +A     + L R G  ++AD+F  +R L     T+ ML G
Sbjct: 483 GSPEELERSARRLAGSMAALLQGSLLVRYGSEEVADIFCASR-LSGHGGTYGMLAG 537


>gi|111020455|ref|YP_703427.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819985|gb|ABG95269.1| probable AidB protein [Rhodococcus jostii RHA1]
          Length = 563

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/533 (36%), Positives = 289/533 (54%), Gaps = 23/533 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N ++ D++L   +    +     EL  +G  V S T Q  A +
Sbjct: 14  PHRTHTVLNQSVPRTDVNEFTLDTVLSEGVRRHDAGWATGELTGIGALVGSATFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HPA+H ++  ++  G H S W    +P  +  A+  R
Sbjct: 74  ANTIIPELKTFDRWGNRIDEVEYHPAYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   + AQ+E GH    S+T+A++ +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMMFAQIEPGHSCPISMTNAAIPSLDLQPDVAAIWKPRALSRSYTPELDAP-GKASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTVAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 GGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVARTRLDCVLGSTAGMRQSVAEAVWHARHRSAFGKVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  S  +E ++ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATVTALRLARAHDEDAS-EQERSFRRLATAVAKYWICKRGPHHAYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVIT 485
            +AR YRE P  ++  GSGN + LDVL  + +  +      + +    GS+    + +  
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNAVLDEHLDR 486

Query: 486 ILRDSISLCKED----KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           + R    L  ED    +  AR + E +ALA  A+ L R     +AD F++ R 
Sbjct: 487 VRRQLGELATEDPARAQSRARTVVESMALALQASLLTRFSPAAVADTFIDARL 539


>gi|168239671|ref|ZP_02664729.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735634|ref|YP_002117317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194711136|gb|ACF90357.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197287665|gb|EDY27056.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 540

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/509 (35%), Positives = 277/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN   P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAYPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|162139504|ref|YP_219238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322717323|gb|EFZ08894.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 546

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 15  FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 75  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 130

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  LD A+
Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|224586216|ref|YP_002640015.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62130454|gb|AAX68157.1| putative acyl-CoA dehydrogenase; adaptive response (transcription
           activated by Ada) [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224470744|gb|ACN48574.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 540

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|200388139|ref|ZP_03214751.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199605237|gb|EDZ03782.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 540

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|145225662|ref|YP_001136340.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145218148|gb|ABP47552.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 552

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 278/550 (50%), Gaps = 19/550 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+    NQ P  +  N  +S  L  +L+         E+  LG    S  AQ    +A+ 
Sbjct: 3   DTHVVTNQVPPLVDFNPAASPVLAESLVREGGGWGADEVADLGALAGSDRAQRWGDLADR 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH +RAA+
Sbjct: 63  HRPVLHTHDRYGHRVDEVEYDPAYHELMSVAVAHGLHAAPWADD-----RAGAHVVRAAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    E GH+   S+T A + AL   P +   + P + SR+YDP  K P  K  +  G
Sbjct: 118 TSVWTP-EPGHMCPISMTYAVVPALRHNPELAAIYEPLLTSRDYDPELKLPTTKAGITAG 176

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252
           + +TEK+GG+D+ A T+Q     DG Y L GHKWF S+PM D F++LAQ  GR       
Sbjct: 177 MSMTEKQGGSDVRAGTTQATPNGDGSYSLRGHKWFTSAPMCDVFLVLAQAAGRGERSDGG 236

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              + CF +PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       +
Sbjct: 237 SGGLSCFFLPRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVATI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  L  LD  + S + MR  L  A H+A+ R   G  LIDQP+M+  +AD+A++  AA
Sbjct: 297 IEMVNLTRLDCTLGSATSMRNGLMRAAHHAQHRSAFGAYLIDQPLMRNVLADLAVEAEAA 356

Query: 370 TALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           T L+ R+A + D A +    E    RI     KYW CK A    AEAMEC GG+GY+E+ 
Sbjct: 357 TMLAMRMAGATDHAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECFGGNGYVEDS 416

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R YRE+P   I  GSGN   LD L  +       + LF  L    G   +  + +  
Sbjct: 417 GMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPECVDVLFDELGIATGHDPRLDRHVAG 476

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           LR      +  +  AR + E I+LA   + L R G   +A+ FL +R           L 
Sbjct: 477 LRPQFDDLESIQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRLDGQWGGAFGTLP 536

Query: 547 GRFNAAHIID 556
              + A I+D
Sbjct: 537 TGLDLAPILD 546


>gi|311281267|ref|YP_003943498.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
 gi|308750462|gb|ADO50214.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
          Length = 540

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 183/459 (39%), Positives = 267/459 (58%), Gaps = 15/459 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71
           +H  + ++F  NQP      N + SD  L   +A        +++LL   G+ + +  + 
Sbjct: 1   MHWQTHTVF--NQPLPLNNSNLFLSDCALREAVAR--EGAGWDIDLLASIGQQLGTAESL 56

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  + P GER D V FHPAWH L++    + +H   W  +     R  
Sbjct: 57  ELGRLANANPPELLRFDPSGERVDDVRFHPAWHLLMQGLCANRVHNLAWKEA----ARDG 112

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAP 190
           +   RAAR  L AQ+EAG L   ++T A+   L+T  P    DW   + S  YD T+ AP
Sbjct: 113 SFVARAARFVLHAQVEAGTLCPITMTFAATPLLLTHLPAAFADWRAPLQSDRYD-THLAP 171

Query: 191 M-QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             QK  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ 
Sbjct: 172 GGQKRGLLIGMGMTEKQGGSDVLSNTTRAEKQSDGTYRLLGHKWFFSVPQSDAHLVLAQA 231

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +
Sbjct: 232 KGGLSCFFLPRFLPDGQRNAVRLERLKDKLGNRSNASSEVEFFDATGWLIGEEGEGVRQI 291

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M  L   D A+ S   MR +L+ A+++A +R   G  L+DQP+M++ ++ +AL +   
Sbjct: 292 LKMGGLTRFDCALGSHGLMRRALSVALYHAHQRQAFGKNLVDQPLMRQVLSRMALQLEGQ 351

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TA  FRLA ++D + + +EEA +AR+  P  K+  CK     +AEAME +GG GY E+  
Sbjct: 352 TAFLFRLARAWDRSTA-AEEALWARLFTPAAKFALCKAGIPFVAEAMEVLGGIGYCEDNE 410

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           + R YRE P NSI  GSGN M LDVL +L K   + E L
Sbjct: 411 LPRLYREMPVNSIWEGSGNIMCLDVLRVLAKQPGVQELL 449


>gi|89899335|ref|YP_521806.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89344072|gb|ABD68275.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 562

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 273/507 (53%), Gaps = 13/507 (2%)

Query: 35  NAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           N Y+ D+ L  A+          EL   G+   S    EL  +AN   P+   +   G R
Sbjct: 31  NMYTQDAALREAVQREGGQWAEGELSEFGQMTGSADYLELGNLANKFQPEFDTHDRFGNR 90

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D V+FHP++H L++ SI  GLH S W        R  AH  RAA+ +L  Q+EAGH   
Sbjct: 91  IDLVKFHPSYHQLMKTSIEHGLHASPWT-----APRAGAHVARAAKSFLHGQVEAGHGCP 145

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++T A++ AL     +   W PK+ +R YDP N    QK  V IG+ +TEK+GG+D+  
Sbjct: 146 ITMTFAAVPALRLQSDLASVWEPKVTARVYDPRNVPVEQKQGVTIGMAMTEKQGGSDVRT 205

Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +++   +  G     Y L GHK+F+S+PM DAF++LAQ  G + CFL+PR   DGS N 
Sbjct: 206 NSTRAYPVGTGGPGQAYELVGHKYFVSAPMCDAFLVLAQAPGGLSCFLLPRWRPDGSKNP 265

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +   RLK K+GN SNA+ E E      +++G+       + +M  +   D  I S +GMR
Sbjct: 266 MQVLRLKKKMGNASNASSETELRGALAWMVGEEGRGVRNIIEMVSMTRFDCMIGSSAGMR 325

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           ++ ++A+H+   R   G +L  QP+M+  +AD+AL+  AAT L+ R+A + D  +   +E
Sbjct: 326 MAASQALHHCSVRSAFGQVLNQQPLMQNVLADLALESEAATTLTMRMARAMDN-RFEEQE 384

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R++  + KYW CK  P    EAMECIGGSG +E+  + R YRE+P N+I  GSGN 
Sbjct: 385 DLLVRLVTAVGKYWICKRTPNHAYEAMECIGGSGVMEDSMMPRLYREAPVNTIWEGSGNV 444

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEK 507
             LDVL  L K   + +  F+ + Q  G+     + I  L   +    + +  AR + ++
Sbjct: 445 QCLDVLRALSKTPAVVDAFFAEVNQARGAQALLDRHIAALATDLKDLADFEYRARDVVDR 504

Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534
           +ALA  A+ L R     ++D F E+R 
Sbjct: 505 MALALQASLLVRHAPAFVSDAFCESRL 531


>gi|197264167|ref|ZP_03164241.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197242422|gb|EDY25042.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
          Length = 540

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|330976861|gb|EGH76890.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 549

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 188/518 (36%), Positives = 270/518 (52%), Gaps = 13/518 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +          +AN + P+ 
Sbjct: 14  NQPPPLDGANLYRIDVPLQEGSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANRHKPEF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+  +I  G+    W        +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q + G     ++T AS+ AL   P + + W PK+ S EYDP+N     K    IG+ +TE
Sbjct: 128 QADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPSNVGIAHKNGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ E  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTEKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            AR LTE IA+A     L  AG   ++D F+  R + +
Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLVSS 524


>gi|168231415|ref|ZP_02656473.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194471657|ref|ZP_03077641.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194458021|gb|EDX46860.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205334317|gb|EDZ21081.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 540

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 276/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  +++ D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLEDDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AE ME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEVMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|66047565|ref|YP_237406.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258272|gb|AAY39368.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 549

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/518 (36%), Positives = 269/518 (51%), Gaps = 19/518 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +          +AN + P+ 
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHRPEF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+  +I  G+    W    EP  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWT---EP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRVGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSIVPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG- 499
           S   GSGN   LDVL  L K     + LF  L       G + +     S+    +D G 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGD---GHGDRHLAAHIGSLKAAFQDTGD 483

Query: 500 ---LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 484 IQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|309811482|ref|ZP_07705264.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308434533|gb|EFP58383.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 559

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 194/532 (36%), Positives = 284/532 (53%), Gaps = 25/532 (4%)

Query: 22  LFAL---NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE----LELLGEYVLSCTAQELA 74
           +FAL   NQ  +  G +A  +D  L    + F S  H +    L  LG    S  A+E  
Sbjct: 4   VFALTPTNQADVMAGFDAVDADEALKDAASAFASHEHADVLGPLRELGVMAGSEEAREHG 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN  TP+  A    G R D VEFHP+WH L+RR +  GL  + W  +        AH 
Sbjct: 64  MAANTFTPRHRAVDRFGARTDAVEFHPSWHWLMRRGVEFGLAGAPWQDA-----SADAHL 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA     + +E GH+   ++T A++ AL     + + +A  + +  Y+P +     K 
Sbjct: 119 RRAAGFITWSGVEPGHVCPLTMTHAAVPALRADEALTQRYADGLAASVYEPGDLPAASKE 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKIS---DG--IYCLSGHKWFLSSPMSDAFIMLAQV 249
            +  G+G+TEK+GG+D+    ++        DG  +Y L GHKWF S+P +D F++LAQ 
Sbjct: 179 GLLAGMGMTEKQGGSDVRTNVTEATPSGFDDDGAAVYSLRGHKWFTSAPTNDLFLVLAQA 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G + CF+VPR+  DG+ N L   RLK+K+GNRSNA+ ELEF + +   LGD       +
Sbjct: 239 PGGLTCFVVPRVHPDGTRNALRIVRLKDKLGNRSNASSELEFHDAYATRLGDEGAGVRTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     LD  + S   MR + +EA  Y  RRH  GG+L D+P M+  +AD+A++  AA
Sbjct: 299 IEMVSATRLDCVLGSAGLMRRATSEAAWYTARRHAFGGVLADKPAMQNVLADLAIESEAA 358

Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           TAL  RLA S D  +S       E A+ R   P+ K+W CK  P  +AEA+EC+GG+GY+
Sbjct: 359 TALGMRLAASVDRIESGDPGSEHERAFRRFALPLAKFWVCKRTPMHVAEALECLGGNGYV 418

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVI 484
           EE  +   +RESP NSI  GSG+   LDVL  L +    FE     L+   G   G  V 
Sbjct: 419 EESGMPLLFRESPLNSIWEGSGSVNALDVLRALTRSPEAFEAFSRELDVTRGDHPGLDVA 478

Query: 485 T--ILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           T  +L D +SL  +D    AR ++ ++A+   A+ L R+  + ++D F+ +R
Sbjct: 479 TKQVLADVVSLTPDDAEYRARDISARMAVVLQASLLLRSAPSSVSDAFIASR 530


>gi|326328696|ref|ZP_08195035.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325953506|gb|EGD45507.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 544

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 192/523 (36%), Positives = 279/523 (53%), Gaps = 9/523 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           +H+   +    NQ P  +  N     +L   L     +    E++ LG    S  AQE  
Sbjct: 1   MHEAHSTHVVTNQVPPLVDHNTAGDPALREGLEREGAAWALPEIDELGRLAGSAEAQEWG 60

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+A    P+LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH 
Sbjct: 61  RLAERVPPRLHTHDRYGHRVDEVEYVPAYHQLMTTAVEHGLHAAPWADD-----RPGAHV 115

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA+ Y    ++AGH    S+T A + AL   P +   + P + +REYD   + P  K 
Sbjct: 116 ARAAKFYTW-NVDAGHGCPISMTYAVVPALRANPELATRFEPLLTNREYDFGLRDPETKR 174

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +  G+ +TEK+GG+D+ A T+     SDG Y L GHKWF S+PMSD F+ LAQ E  V 
Sbjct: 175 GLIAGMSMTEKQGGSDVRANTTTATAQSDGTYVLRGHKWFTSAPMSDLFLTLAQTEAGVS 234

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L  G  N + + RLK+K+GN+SNA+ E+E+    G+L+G+       + +M  
Sbjct: 235 CFLVPRVLPGGERNAMRFMRLKDKLGNKSNASSEIEYDAATGWLVGEEGRGVRTIVEMVN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD  I S +GMR +L  A H+A  R   G +LIDQP M+  +AD+ ++  AAT    
Sbjct: 295 MTRLDCVIGSSAGMRTALTMAAHHASHRSAFGKLLIDQPAMRNVLADLQVESEAATTAML 354

Query: 375 RLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RLA + D A    E EAA  RI   +TKY+ CK AP ++ EA+EC+GG+GYIE+  +AR 
Sbjct: 355 RLAGANDRAIRGDEGEAALRRIALAVTKYYVCKRAPFMVNEALECLGGNGYIEDFDVARI 414

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE P  SI  GSGN   LD L  L K  +  +   +  E   G+  +    +  L+   
Sbjct: 415 YREMPLLSIWEGSGNVAALDALRALAKEPHTLDAFLAEAELAAGADARYDAALDRLKKEF 474

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +   + +  AR + E++AL    + L R     +AD F  +R 
Sbjct: 475 TSFDDLELRARRIVEQLALVFQGSQLLRHAPAAVADAFCSSRL 517


>gi|226943070|ref|YP_002798143.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226717997|gb|ACO77168.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 571

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 201/533 (37%), Positives = 289/533 (54%), Gaps = 15/533 (2%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSC 68
           R A+  +HQ +++    NQ P   G N Y  D  L   +  +     +    L +Y    
Sbjct: 19  RSAVMDLHQYAETHEVTNQVPPLDGANLYRIDRPLQEWLRRYDGGWAERR--LDDYGALA 76

Query: 69  TAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
               LA    AN N P L ++   G R D+V+FHPA+H L+R +I  GL    W    EP
Sbjct: 77  GGPLLAAGFAANENRPLLRSHDRYGHRIDQVDFHPAYHELMRAAIAHGLPVLPWR---EP 133

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R  A   RA  +YL  Q+EAG     ++T AS+ AL   P + + W P++ + EYDP 
Sbjct: 134 --RPGAQVARAGLMYLHNQVEAGTACPLTMTFASVAALRRQPEIAESWLPRVLAGEYDPR 191

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA 242
           N    +K    +G+ +TEK+GGTD+ A +++   +        Y L GHKWF S+PMSDA
Sbjct: 192 NLPVERKGGATLGMAMTEKQGGTDVRANSTRAWPVGAAGPGQAYELLGHKWFCSAPMSDA 251

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+ LA  +G + CFL+PR   DG  N    QRLKNK+GN SNA+ E+E+     +++G+ 
Sbjct: 252 FLTLAWSDGGLSCFLLPRHRPDGRRNEFYIQRLKNKLGNWSNASAEVEYRGALAWMIGEE 311

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  L   D  I S + MR +L +A+H+   R V G +L +  +M+  +AD+
Sbjct: 312 GRGVPTILEMVGLTRFDCMIGSSALMRQALTQALHHCAHRLVGGQVLSEHALMQNVLADL 371

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AA AL+ RLA + D A+  SE  + AR++  I KYW CK AP +I EA EC+GG+
Sbjct: 372 ALESEAALALTLRLARALDHAEDESER-SLARLLTAIGKYWICKRAPEMIGEAAECLGGA 430

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY+EE  + R YRE+P NSI  GSGN   LDVL +L K     E LF  L+   G +  K
Sbjct: 431 GYVEESILPRLYREAPVNSIWEGSGNVQCLDVLRVLGKEPEALEVLFDELDGGHGDARLK 490

Query: 483 V-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             I  LR +++   E    AR L E++A+   A  L  AG   ++D F+ +R 
Sbjct: 491 ARIEWLRKALADRTEIHYCARRLVEELAVTLQAGLLLEAGNAAVSDAFIHSRL 543


>gi|107024480|ref|YP_622807.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116688141|ref|YP_833764.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105894669|gb|ABF77834.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116646230|gb|ABK06871.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 550

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/527 (35%), Positives = 293/527 (55%), Gaps = 18/527 (3%)

Query: 19  SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           +DS  A+ NQ    +  N +++D +L  AL          +L+  G  + S    +LA  
Sbjct: 2   TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTAQLADE 61

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +TP+LHA+   G R D+V+FHPAWHALL +  H+G   S+  R  +P  R+      
Sbjct: 62  ANQHTPELHAFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K ++
Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRAI 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251
             G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G
Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAG 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
              CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +
Sbjct: 237 SPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA +
Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ RLA++F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IA
Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488
           R +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+   ++   +  LR
Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             ++   +  +   R   +++A+ + A  L R     ++D F+  R 
Sbjct: 475 AMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVSDAFVATRL 521


>gi|226309495|ref|YP_002769457.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188614|dbj|BAH36718.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 545

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 289/534 (54%), Gaps = 8/534 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  I  +A     +L AL     S   +E+  +G    S  AQE   +A  + P L 
Sbjct: 9   NQVPPLIDYDAAEYAPILEALHREEASDAAEEVHRVGVRAGSAQAQEWGDLAEEHPPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V + PA+H L+  ++  GLH + W    +P     AH +RAA++ +  Q
Sbjct: 69  THDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPW---VDP--NPHAHLVRAAKMAVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A + AL     +   + P + +R YD   KAP+ K  +  G+ +TEK
Sbjct: 124 TDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +PR+L DG
Sbjct: 184 QGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N +  QRLK+K+GN SNA+ E+E+ +   +++G+       + +M  +  LD  I + 
Sbjct: 244 SLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRLDCTIGTA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GMRV   +A+H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   D A S
Sbjct: 304 TGMRVGTLQAVHHANHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAALTDRATS 363

Query: 386 RSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               A A  RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+P  S+  
Sbjct: 364 GDAHAGALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + K     +  F  L+Q  G   +  + +  L  +     + +  AR
Sbjct: 424 GSGNVAALDTLRAMAKQPETLQVFFDELKQASGVDARFDQTVRDLEAAFGDFDDIEYRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +   +ALA  A+ L R G   +AD F  +R  ++  S    L    + A I++
Sbjct: 484 KIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGIDIAPILE 537


>gi|330969464|gb|EGH69530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 549

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +          +AN + P+ 
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHKPEF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+  +I  G+    W    EP  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWT---EP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRVGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|320322677|gb|EFW78770.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. B076]
          Length = 549

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/515 (36%), Positives = 267/515 (51%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +      E   +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  R A  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARVAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     K    +G+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATLGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|300705483|ref|YP_003747086.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299073147|emb|CBJ44505.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 553

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 291/538 (54%), Gaps = 28/538 (5%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N ++SD+ L   +       H + L + GE + +      A  AN   P+
Sbjct: 10  FNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRVFGETLGAPRTLAWAAEANRYPPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A  ++ 
Sbjct: 70  LHTHARTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG+G+T
Sbjct: 125 AQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y L+GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  + GS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L+DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLVDQPLMRNVLADLALESQAATLLMMAL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  + +  +   +L     QD+G  + G + +     ++   
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480

Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               G      AR + + +AL + AA +      D A+ F+ +RF    H  H  + G
Sbjct: 481 LHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534


>gi|88799657|ref|ZP_01115232.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88777551|gb|EAR08751.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 557

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 187/518 (36%), Positives = 286/518 (55%), Gaps = 15/518 (2%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           N PPL   +N + SD +LL  L          +L  LG  V S    + A  AN   P L
Sbjct: 19  NTPPLLENINLFDSDLTLLECLDRGQAGWASGQLSELGAIVGSAERLQAAMEANRVRPAL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V FHP +H  +  S  +GL  S W+++     +  AH  RAA  YL++
Sbjct: 79  ATHDRYGHRIDEVTFHPGYHDFMTLSKANGLTGSPWEKA-----QPGAHVARAAGSYLVS 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    ++T AS+  L+  P +  +W PKI +R Y+P N    +K SV IG+ +TE
Sbjct: 134 QVEAGHCCPITMTFASVPTLLKQPDIADEWIPKILNRAYEPGNVPYFEKQSVTIGMAMTE 193

Query: 205 KRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           K+GG+D+ A +++ + I      DG + L GHK+F S+PM DAF++LA  +  + CFLVP
Sbjct: 194 KQGGSDVRANSTRAEAIDPESPKDG-FELIGHKFFASAPMCDAFLVLAYTDVGLSCFLVP 252

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N + + RLK+K+GN SNA+ E+E    FG+L+G+       + +M  L   D
Sbjct: 253 RWRPDGSKNPIQFLRLKDKMGNVSNASSEIELRGAFGWLIGEEGRGVANILEMVALTRFD 312

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR  + + +H+ + R   G  LIDQP+M+  +AD+ L+  AAT L+FR+A +
Sbjct: 313 CLVSSAAAMRQHMTQILHHTQHRAAFGKKLIDQPLMRNLLADLELEAEAATLLAFRVAQA 372

Query: 380 FD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D +A+   +E A+AR+   I KYW CK  P    EAME IGGSG +E   + R YR++P
Sbjct: 373 LDGQAQGHRDEGAFARLATAIGKYWVCKRQPNHAYEAMETIGGSGVMENSVMPRLYRDAP 432

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKE 496
            N+I  GSGN   LD L  +++  +    + + +E  + L +     +  L+  ++  ++
Sbjct: 433 INTIWEGSGNVQCLDALRAIQRDPDSLAAVMAEIELAKGLNAHFDDHLQGLQQQLTQTED 492

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR L + +ALA  A+ + R      A  F + RF
Sbjct: 493 LEFRARSLVQSLALALQASLMLRHMPTSHAHAFCDARF 530


>gi|330938240|gb|EGH41917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 549

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/516 (36%), Positives = 270/516 (52%), Gaps = 13/516 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +          +AN + P+ 
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHKPEF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLALAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
            AR LTE IA+A     L  AG   ++D F+  R +
Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522


>gi|317125027|ref|YP_004099139.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589115|gb|ADU48412.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 545

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 185/462 (40%), Positives = 265/462 (57%), Gaps = 19/462 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY---VLSCTAQELARMANYNTP 82
           NQ   F+  +  S D  L   +  +  V  +E+  LGE      S  AQ+  R+A+ N P
Sbjct: 8   NQVEPFVDRDFLSEDRALAEAVGRW--VAAEEVAPLGELGRLAGSPEAQDHGRLADANRP 65

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            L  +   G R D+VEFHP+WH L+ R++  GL    W     PV R  AH  RAA   +
Sbjct: 66  VLRTHDARGNRIDEVEFHPSWHWLMARAVGAGLTAEPWT---APVGRG-AHARRAAGFMI 121

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            +++EAGH    S++ A+  AL     +   W PK+ SR YD   +   +K  V  G+G+
Sbjct: 122 WSRVEAGHGCPISMSYAAGPALRHDAELASRWLPKLASRTYDFGIRPLAEKAGVIAGMGM 181

Query: 203 TEKRGGTDI-----AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           TEK+GG+D+      A  + G  +    Y L+GHKWFLS+PMSD F++LAQ    + C +
Sbjct: 182 TEKQGGSDVRANATTATLTPGGPLPGETYRLTGHKWFLSAPMSDVFLVLAQAPAGLTCLV 241

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR LEDG+ N    QRLK+K+GN SNA+ E+EF  T+G  LGD       + +M     
Sbjct: 242 VPRALEDGTRNPFALQRLKDKLGNHSNASSEVEFDGTWGSRLGDEGRGVRTIIEMVGATR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD+ + S + MR ++  A+H+AR+R   G +L+DQP+M+  +AD+AL+  AAT L+ RLA
Sbjct: 302 LDTVLGSTATMRDAVTRAVHHARQRTAFGRLLVDQPLMRNVLADLALEAEAATVLAMRLA 361

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++FD     + EA +ARI   + KYW CK    ++AEA+EC+GG+GY+EE  +AR YRE+
Sbjct: 362 HAFD-----AGEADFARIGVAVGKYWVCKRTAPMVAEALECLGGNGYVEENVLARLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           P NSI  GSGN   LDV+  + +     E L   L +  G S
Sbjct: 417 PLNSIWEGSGNVNALDVIRAISREPASLEALTKELHRVRGVS 458


>gi|319442251|ref|ZP_07991407.1| isovaleryl CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 548

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 190/525 (36%), Positives = 278/525 (52%), Gaps = 25/525 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ    + +N ++ D  LV  +  F P      L L+G  V + + Q  A +AN  TP 
Sbjct: 7   FNQSAPRVDINEFTCDPALVEAVDTFAPDADSYRLGLIGAEVGTASYQHDADLANRITPV 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
             ++   G R D+VEFHP++H ++  S++ GLH S W           A+  RAA   L+
Sbjct: 67  HTSHDRWGNRVDEVEFHPSYHRIMGFSVNQGLHTSAWAHP-----GPGANVERAAGFMLV 121

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +Q+EAGH    S+T A + AL  +P + + W PK+ S  YDP  + P  K+S   G+ +T
Sbjct: 122 SQIEAGHGCPVSMTHAVVPALRKSPEIAEFWEPKLLSTSYDPELRDPATKSSAIFGMAMT 181

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--------- 254
           EK+GG+D+ A T++    +DG + L+GHKWF S+P SDAF++LAQ     G         
Sbjct: 182 EKQGGSDVRANTTRATSNADGTWSLTGHKWFCSAPQSDAFLVLAQTGEASGSGNADQALS 241

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L  G  N    QRLK+K+GNRSN++ E+E   T G+L+G+       + +M  
Sbjct: 242 CFLVPRILPGGGRNAFFIQRLKDKLGNRSNSSSEIELDGTVGWLVGEEGRGVPTIIEMVN 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD    S +GMR  +AEA  +AR R   G  LIDQP M   IAD+ ++  AAT  + 
Sbjct: 302 RTRLDCIFGSAAGMRQGVAEAAWHARHRAAFGATLIDQPAMANVIADLQVESEAATWTAM 361

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA + D+         + R+   + KYW CK       E++EC+GG+GY E   +AR  
Sbjct: 362 RLAAAHDDDNLED----FRRLATAVAKYWVCKRGTHHAYESLECLGGNGYTELFPLARRL 417

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITILR 488
           RE+P N++  GSGN + LDVL  L +     E   + + + +G   +      ++ T+L+
Sbjct: 418 REAPVNAVWEGSGNVIALDVLRALARQPEAGEAFVAEMSRSVGVDERYDAQFNRMTTLLK 477

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           D+ S   E   LAR L E +AL   A  L       +A  FL  R
Sbjct: 478 DAASSPAEAPALARRLIESLALTLQAQTLLTHAPAPVASAFLAGR 522


>gi|170731486|ref|YP_001763433.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169814728|gb|ACA89311.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 550

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 189/527 (35%), Positives = 290/527 (55%), Gaps = 18/527 (3%)

Query: 19  SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           +DS  A+ NQ    +  N +++D +L  AL          +L+  G  + S     LA  
Sbjct: 2   TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLADE 61

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +TP+LH +   G R D+V+FHP WHALL +  H+G   S+  R  +P  R+      
Sbjct: 62  ANQHTPELHTFDRRGRRIDRVDFHPVWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+
Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSI 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251
             G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G
Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEDG 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
              CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +
Sbjct: 237 GPSCFYVPRWRPDGTKNAIEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA +
Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ RLA++F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IA
Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488
           R +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+   ++   +  LR
Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             ++   +  +   R   +++A+ + A  L R     +AD F+  R 
Sbjct: 475 AMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVADAFVATRL 521


>gi|120402280|ref|YP_952109.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955098|gb|ABM12103.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 551

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 188/518 (36%), Positives = 270/518 (52%), Gaps = 9/518 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+    NQ P     N  +S  L  ALI         E+  LG    S  AQ    +A+ 
Sbjct: 3   DTHVVTNQVPPLEDFNPAASPVLAEALIREGGQWGADEVAELGALAGSAAAQRWGELADR 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  +H +RAA+
Sbjct: 63  NRPVLHTHDRTGHRIDEVEYDPAYHQLMTVAVGHGLHAAPWADD-----RDGSHVVRAAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    E GH+   S+T A + AL   P +   + P + SR YDP    P  K  +  G
Sbjct: 118 TSVWTP-EPGHICPISMTYAVVPALRHNPELAAVYEPLLTSRVYDPELAVPSAKPGITAG 176

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T++     DG Y L GHKWF S+PM D F++LAQ  G + CF +P
Sbjct: 177 MSMTEKQGGSDVRAGTTEATPNGDGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFFLP 236

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD
Sbjct: 237 RILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLD 296

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S + MR  L  A H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A +
Sbjct: 297 CALGSATSMRNGLMRATHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMLAMRMAGA 356

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A +    E    RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P
Sbjct: 357 TDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAP 416

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
              I  GSGN   LD L  +       + LF  L    G   +    +  LR  +   + 
Sbjct: 417 LMGIWEGSGNVSALDTLRAMATRPECIDVLFDELAATDGHDARLDAHVQGLRPQLGDPET 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR + E I+LA   + L R G   +A+ FL +R 
Sbjct: 477 IQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRL 514


>gi|33602382|ref|NP_889942.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33576821|emb|CAE33901.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 552

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 193/533 (36%), Positives = 285/533 (53%), Gaps = 24/533 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           QP  +    NQ       + Y +D +L  A+     +    EL   G ++      E A 
Sbjct: 2   QPFLTHLVTNQVAPLEDYSLYETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN N+P+L AY P G R DKV FHPAW+AL+   +  GLH   W    +PV    AH  
Sbjct: 62  EANRNSPRLLAYDPTGHRQDKVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPM 191
           RAA   +  Q+EAG L   ++T A++  L   P       +DW   ++SRE+D ++    
Sbjct: 117 RAAAYLMQGQVEAGTLCPTTMTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIG 176

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLA 247
           +K    IG+GLTEK+GG+D+ ++ ++ + +        Y L+GHKWFLS P +DA ++LA
Sbjct: 177 RKRGALIGMGLTEKQGGSDLRSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLA 236

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  +GCF VPR + DG  N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T 
Sbjct: 237 RTDEGLGCFFVPRWVPDGPRNAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTA 296

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S + +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  
Sbjct: 297 VLLEMAATTRLDCVLGSAALLRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESE 356

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           AAT L+ RLA + DE   R++  A A  R+  P  K W CK A A + E ME +GG+GY+
Sbjct: 357 AATVLALRLARAVDE---RADPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYV 413

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE  +AR YRE+P NSI  GSGN M LDVL  L +       L   L++  G        
Sbjct: 414 EEAPLARLYREAPVNSIWEGSGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQ 472

Query: 486 ILRDSISLCKE----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            L D ++L  +     + LAR +   +A    AA L R     +   F   R 
Sbjct: 473 ALDDWLALVAQPDSVPQALARRVAAGLATLWQAALLIRHAPAPVGAAFAATRL 525


>gi|288937519|ref|YP_003441578.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22]
 gi|288892228|gb|ADC60546.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22]
          Length = 545

 Score =  309 bits (791), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 177/456 (38%), Positives = 258/456 (56%), Gaps = 9/456 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD+ L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLTWQED----AREGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P + +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPALFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449


>gi|204926971|ref|ZP_03218173.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204323636|gb|EDZ08831.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 540

 Score =  309 bits (791), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 277/509 (54%), Gaps = 7/509 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLSSIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDLQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L K   +++ L     +  G        + +    L K D+ + R
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531
            +T+++ L    A + R     +A  + +
Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|298489012|ref|ZP_07007035.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156510|gb|EFH97607.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 549

 Score =  309 bits (791), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 189/515 (36%), Positives = 267/515 (51%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +      E   +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYD  N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAHKRGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQAAHHCAYRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|92114944|ref|YP_574872.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91798034|gb|ABE60173.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 550

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/516 (36%), Positives = 271/516 (52%), Gaps = 9/516 (1%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP+    +    D  L   L    P+ V + L  L       + Q LA  AN+  P+L
Sbjct: 17  NQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANHYPPEL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V + PA+H L+  +   G H   W+           H+   A LYL+ 
Sbjct: 77  RTFDRHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEG-----AGGHQAHIAALYLLT 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E G     ++T A+   L     V   W P++ + +YDP       K +   G+ +TE
Sbjct: 132 QVEPGFCCPITMTHAAYPVLRQDSAVLATWGPRLLAHDYDPRALPIGDKRAATFGMAMTE 191

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ + T++    +DG   L+GHKWF S+PMSDAF+ LA+ E  +GCFLVPR   D
Sbjct: 192 KQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGIGCFLVPRFRPD 251

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  NG+  QRLK+K GNR+NA+ E+E+++ +   +G        + DM     LD+A   
Sbjct: 252 GERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLDAATAP 311

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR +L EA H+A+ R   G  L DQP+M+R IAD+AL+  A+ AL  R A +FD A 
Sbjct: 312 AGMMRQALREAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARAFDGAP 371

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E A AR++  + K+W  K  PA +AEAMEC+GG GY+EE  +AR YRE+P NSI  
Sbjct: 372 HDDHERALARLLPALAKFWHNKRGPAFMAEAMECLGGIGYVEEAPLARLYREAPVNSIWE 431

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED-KGLA 501
           GSGN M LDV+ +L +       L   L    G+     + + +L   +    E  +  A
Sbjct: 432 GSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRLDATPETLEAQA 491

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
           R+LT+++A    AA L R   N + + F   R  D 
Sbjct: 492 RWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDE 527


>gi|257482198|ref|ZP_05636239.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331011338|gb|EGH91394.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 549

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/515 (36%), Positives = 266/515 (51%), Gaps = 13/515 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G        Q    +AN N P  
Sbjct: 14  NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGPLMQA-GFLANQNKPAF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D +EFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T AS+ AL   P + + W PK+ S EYD  N     K    IG+ +TE
Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAHKRGATIGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR
Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D 
Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + 
Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P N
Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499
           S   GSGN   LDVL  L K     + LF  L    G       I  L+ +     + + 
Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 487 RARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|33596331|ref|NP_883974.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33566100|emb|CAE37000.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 552

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/513 (36%), Positives = 279/513 (54%), Gaps = 24/513 (4%)

Query: 37  YSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
           Y +D +L  A+     +    EL   G ++      E A  AN N+P+L AY P G R D
Sbjct: 22  YETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAAEANRNSPRLLAYDPTGHRQD 81

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV FHPAW+AL+   +  GLH   W    +PV    AH  RAA   +  Q+EAG L   +
Sbjct: 82  KVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVARAAAYLMQGQVEAGTLCPTT 136

Query: 156 VTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +T A++  L   P       +DW   ++SRE+D ++    +K    IG+GLTEK+GG+D+
Sbjct: 137 MTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIGRKRGALIGMGLTEKQGGSDL 196

Query: 212 AAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            ++ ++ + +        Y L+GHKWFLS P +DA ++LA+ +  +GCF VPR + DG  
Sbjct: 197 RSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLARTDEGLGCFFVPRWVPDGPR 256

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T  + +M     LD  + S + 
Sbjct: 257 NAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTAVLLEMAATTRLDCVLGSAAL 316

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  AAT L+ RLA + DE   R+
Sbjct: 317 LRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESEAATVLALRLARAVDE---RA 373

Query: 388 EEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +  A A  R+  P  K W CK A A + E ME +GG+GY+EE  +AR YRE+P NSI  G
Sbjct: 374 DPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEEAPLARLYREAPVNSIWEG 433

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE----DKGLA 501
           SGN M LDVL  L +       L   L++  G         L D ++L  +     + LA
Sbjct: 434 SGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQALDDWLALVAQPDSVPQALA 492

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R +   +A    AA L R     +   F   R 
Sbjct: 493 RRVAAGLATLWQAALLIRHAPAPVGAAFAATRL 525


>gi|94500182|ref|ZP_01306716.1| fadE8 [Oceanobacter sp. RED65]
 gi|94427755|gb|EAT12731.1| fadE8 [Oceanobacter sp. RED65]
          Length = 571

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/526 (35%), Positives = 284/526 (53%), Gaps = 22/526 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      NAY+SD  L   +  F    H+ EL   G+ V S    E    AN   P+
Sbjct: 25  FNQPSSLDPYNAYASDPALQHWVRIFDGAWHESELHTYGQRVGS-DLFEAGFAANKYKPE 83

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   GER D+V+FHP++H L++ +I  G H   W        +  AH  RAA  Y+ 
Sbjct: 84  FKPHNRFGERIDQVDFHPSYHLLMQTAIEAGHHSLPWCEK-----KPGAHVARAALEYMH 138

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q + G     ++T A++ ALM  P + K+W PKI +  YD  N    +K  + IG+ +T
Sbjct: 139 TQADPGSGCPLTMTFAAVPALMHQPNIAKEWIPKITANHYDHRNIPFYEKQGLTIGMAMT 198

Query: 204 EKRGGTDIAAITSQG---QKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ---VEGR---V 253
           EK+GG+D+ A T++    +K+  G  Y + GHKWF S+PM DAF++LA    V+G+   +
Sbjct: 199 EKQGGSDVRANTTKAYPLEKVGSGEAYEIVGHKWFCSAPMCDAFLVLAHTYDVQGKSNGL 258

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG  N +  QRLK+K+GN SNA+ E+E+   F +++G+       + +M 
Sbjct: 259 SCFLLPRWRPDGRKNEMYVQRLKDKMGNVSNASSEVEYRGAFAWMIGEEGRGVRTIIEMV 318

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  + S   MR +LA+A H+   R   G  L +QP+M+  +AD+A++  AA A+S
Sbjct: 319 SMTRFDCMVGSSGIMRQALAQAYHHTSGRAAFGKNLHEQPLMQNVLADLAIESEAALAIS 378

Query: 374 FRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            R+A+S D+ +S  E   EA ++R+   I KYW CK       E MECIGG G +E+  +
Sbjct: 379 MRVAHSLDKLQSNPEDEQEARFSRVATAIGKYWICKRTAQFTYECMECIGGVGVVEDNVL 438

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
            R YRESP N+I  GSGN   LDVL  ++K   + +   + L +  G      + +  L+
Sbjct: 439 PRLYRESPINAIWEGSGNVQCLDVLRAMQKDPKVVDAFMAELAKAHGRYDVFDQYLAALK 498

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           D     +  +  AR + EK+ALA  A+ L +    DIA  ++++R 
Sbjct: 499 DEFQDLQTLEYRARTVVEKLALAWQASTLIQFADRDIAKAYIDSRL 544


>gi|254246705|ref|ZP_04940026.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184]
 gi|124871481|gb|EAY63197.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184]
          Length = 1070

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/527 (35%), Positives = 291/527 (55%), Gaps = 18/527 (3%)

Query: 19  SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           +DS  A+ NQ    +  N +++D +L  AL          +L+  G  + S     LA  
Sbjct: 2   TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLADE 61

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +TP+LH +   G R D+V+FHPAWHALL +  H+G   S+  R  +P  R+      
Sbjct: 62  ANQHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K ++
Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPLADKRAI 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251
             G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G
Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEDG 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
              CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +
Sbjct: 237 GPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA +
Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ RLA++F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IA
Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488
           R +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+   ++   +  LR
Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDALR 474

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             ++   +  +   R   +++A+ + A  L R     +AD F+  R 
Sbjct: 475 AMLAAPTDTLEASGRVYAQRLAVVTQACLLRRDAPAAVADAFVATRL 521


>gi|86139246|ref|ZP_01057816.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824090|gb|EAQ44295.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 551

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/514 (36%), Positives = 279/514 (54%), Gaps = 10/514 (1%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           +N PP     + +SSD  L  A+          +L   G+        E A  AN  +P+
Sbjct: 16  INTPPHMGDQDLWSSDLPLREAIQREGADWAAPKLADFGKKAGRAEVLEQADQANRYSPE 75

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           +  +   G R ++V FHPA+HAL   ++ +GL    W+       +   H   AA  Y+M
Sbjct: 76  VKPFDRYGMRVNQVSFHPAYHALQELAVANGLSNFAWNNP-----KAGGHVTHAAMNYMM 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q+E G L   ++T A++  L  +P + ++W PK+ S EYD  +    +K    +G+ +T
Sbjct: 131 NQIEGGVLCPIAMTYAAIPTLKASPALAQEWLPKLLSTEYDKRDIPLSEKNGAQMGMFMT 190

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           EK+GG+D+ A +++  +  +G Y L+GHK+F S+PMSDAF+ LA  +  + CFL+PR   
Sbjct: 191 EKQGGSDVRANSTRAVRDGEG-YRLTGHKFFCSAPMSDAFLTLAYTDEGLSCFLMPRFTP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  NGL  QRLK+K+GN+SNA+ E+E + T+G  +G        + +M        A  
Sbjct: 250 DGQRNGLFLQRLKDKLGNKSNASSEMELNQTWGLRVGAEGKGVKTIIEMVQGTRFYCAFG 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S + MR  L +A+H+   R     +LIDQP+M+  +AD+AL+  AATALS RL  + DE 
Sbjct: 310 SAALMRQGLVQALHHTSHRSAFQKLLIDQPLMQNVLADLALESEAATALSLRLGRAIDEG 369

Query: 384 KSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++  ++ AA ARI   I KYW CK AP    EAMEC GG GY+EE  + R YRE+P NSI
Sbjct: 370 EAGDKDAAALARIGTAIGKYWICKRAPNHTYEAMECHGGPGYVEESIMPRLYREAPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGL 500
             GSGN + LDVL  L++         S +E   G +    K +  L+ +++   + +  
Sbjct: 430 WEGSGNVICLDVLRALQRDPEAGAAFLSEVETAKGGNALFDKSLDALKQALADPSDFQLR 489

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           AR LTE +AL   AA L R     ++D F   R 
Sbjct: 490 ARRLTEHMALIWQAALLVRFAPACVSDAFCATRL 523


>gi|78064774|ref|YP_367543.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965519|gb|ABB06899.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 550

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/520 (35%), Positives = 283/520 (54%), Gaps = 19/520 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  ALI         +L+  G  + S     LA  AN++TP+L
Sbjct: 10  NQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLADEANHHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +   G R D+V+FHPAWHALL +  H+G     +  S     R+      AA  YL  
Sbjct: 70  HTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRES-----RRGRWAATAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P +      K++S +YDP +    +K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSNDYDPRDVPVAEKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLK+K+GNRSN++ E+E ++ +G +LGD       + +M     L+
Sbjct: 245 RWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA +LS RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-----C 494
           NSI  GSGN M LDVL  + +  +   +       DLG +G+  I    D++ +      
Sbjct: 424 NSIWEGSGNVMCLDVLRAISREPDA-AEALFAELADLG-AGEPHIRAALDALRVMLAAPA 481

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              +   R   +++A+ + A  L R     +AD F+  R 
Sbjct: 482 DTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRL 521


>gi|149927464|ref|ZP_01915718.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149823737|gb|EDM82963.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 570

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/496 (37%), Positives = 263/496 (53%), Gaps = 16/496 (3%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL  +AN   P+L  +   G R D V +H A+H L++ ++ +GLH   W        R+ 
Sbjct: 71  ELGFLANKYPPELDTHDRFGNRVDSVRYHGAYHELMKSALEEGLHSQPWTNP-----REG 125

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AH +R A+ ++ +Q+EAGH    ++T AS+ +    P V   +  KI  R YDP N    
Sbjct: 126 AHVVRGAKAFMQSQVEAGHGCPVTMTFASIPSFRLQPEVAAIFESKILHRGYDPRNLPVD 185

Query: 192 QKTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           +K S+ +G+G+TEK+GG+D+ A     T   Q  +  +Y L GHKWFLS+PM D F++LA
Sbjct: 186 EKLSITVGMGMTEKQGGSDVRANSTVATPVNQPGAGQMYSLVGHKWFLSAPMCDVFLILA 245

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q    V CF VPR L DG+ N L   RLK+K+GN+SNA+ E+EF    G+L+GD      
Sbjct: 246 QTTAGVSCFAVPRWLPDGTKNALNVIRLKDKMGNKSNASSEVEFRGAQGWLIGDEGRGVP 305

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M  L   D    S   MR  LA AIH+ ++R   G  LIDQP+M+  +AD+ L+  
Sbjct: 306 TIIEMVSLTRFDCMGASAGLMRAGLANAIHHCKQRAAFGAKLIDQPLMQNVLADLQLEYE 365

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A A S R+A + D   S   EA  AR+   + KYW CK AP    E MECIGGSG +E 
Sbjct: 366 GAMAFSMRMARALDLKDSDEHEAHLARLATAVGKYWICKRAPQHSYEIMECIGGSGVMEN 425

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVIT 485
               R +RES  N I  GSGN   LDVL  + K   +     + L +  G +    + + 
Sbjct: 426 SIYPRLFRESVINPIWEGSGNVQCLDVLRAIGKTPAVLMAFNAELNKARGGNSILDQYLD 485

Query: 486 ILRDS-ISLCKED-KGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
            L D  + L   D  GL   AR + +++ALA  A+ L R   + +++ F  +R     H 
Sbjct: 486 RLNDQFMQLNPADMHGLQYSARTMVDQMALAFEASLLVRHAPDAVSEAFCASRLAAQGHH 545

Query: 541 THCMLHGRFNAAHIID 556
            +  L    N   II+
Sbjct: 546 NYGALPKGLNVKSIIE 561


>gi|290512257|ref|ZP_06551624.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55]
 gi|289775252|gb|EFD83253.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55]
          Length = 545

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 177/456 (38%), Positives = 257/456 (56%), Gaps = 9/456 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD+ L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----ARESAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449


>gi|330952998|gb|EGH53258.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 549

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/520 (36%), Positives = 270/520 (51%), Gaps = 21/520 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYN 80
           NQPPL  G N Y  D  L      F      S +     L G  +++        +AN +
Sbjct: 14  NQPPLLDGANLYRIDVPLQEWSRRFGAGWAQSRIDAYGALAGGPLMAA-----GFLANQH 68

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+  ++   G R D VEFHPA+H L+  +I  G+    W    +P  +  AH  RAA  
Sbjct: 69  KPEFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMS 123

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+
Sbjct: 124 YLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVQSTEYDPRNVGIAHKRGATIGM 183

Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CF
Sbjct: 184 AMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCF 243

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +M  + 
Sbjct: 244 LLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMT 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+
Sbjct: 304 RFDCMIGSSALMRQALTQATHHCAHRTVSGRLLAEQPLMQNVLADLALESEAALALTLRM 363

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + D       E  + R++  + KYW CK AP +I EA EC+GG+GY+E+  + R YRE
Sbjct: 364 GRALDHLDD-DHEKRFVRLVTAVGKYWICKRAPGMINEAAECLGGAGYVEDSILPRLYRE 422

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCK 495
           +P NS   GSGN   LDVL  L K     + LF  L    G       I  L+ +     
Sbjct: 423 APVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRQLAAHIGKLKAAFQDTG 482

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
           + +  AR LTE IA+A     L  AG   ++D F+  R +
Sbjct: 483 DIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522


>gi|33593334|ref|NP_880978.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33572690|emb|CAE42613.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332382743|gb|AEE67590.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 552

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 189/513 (36%), Positives = 279/513 (54%), Gaps = 24/513 (4%)

Query: 37  YSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
           Y +D +L  A+     +    EL   G ++      E A  AN N+P+L AY P G R D
Sbjct: 22  YETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAAEANRNSPRLLAYDPTGHRQD 81

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV FHPAW+AL+   +  GLH   W    +PV    AH  RAA   +  Q+EAG L S +
Sbjct: 82  KVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVARAAAYLMQGQVEAGTLCSTT 136

Query: 156 VTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +T A++  L   P       +DW   ++SRE+D ++    +K    IG+GLTEK+GG+D+
Sbjct: 137 MTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIGRKRGALIGMGLTEKQGGSDL 196

Query: 212 AAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            ++ ++ + +        Y L+GHKWFLS P +DA ++LA+ +  +GCF VPR + DG  
Sbjct: 197 RSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLARTDEGLGCFFVPRWVPDGPR 256

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T  + +M     LD  + S + 
Sbjct: 257 NAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTAVLLEMAATTRLDCVLGSAAL 316

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  AAT L+ RLA + DE   R+
Sbjct: 317 LRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALENEAATVLALRLARAVDE---RA 373

Query: 388 EEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +  A A  R+  P  K W CK A A + E ME +GG+GY+EE  +AR YRE+P NSI   
Sbjct: 374 DPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEEAPLARLYREAPVNSIWED 433

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE----DKGLA 501
           SGN M LDVL  L +       L   L++  G         L D ++L  +     + LA
Sbjct: 434 SGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQALDDWLALVAQPDSVPQALA 492

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R +   +A    AA L R     +   F   R 
Sbjct: 493 RRVAAGLATLWQAALLIRHAPTPVGAAFAATRL 525


>gi|218551457|ref|YP_002385249.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469]
 gi|218358999|emb|CAQ91659.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469]
          Length = 547

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/515 (35%), Positives = 279/515 (54%), Gaps = 9/515 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           VH  + ++F  NQP      N Y SDS L   +    +    EL   +G+ + +  + EL
Sbjct: 7   VHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 64

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 65  GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 120

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
            +RAAR  + AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 121 VVRAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 180

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 181 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 241 LSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +   T+L
Sbjct: 301 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++  +E  +AR+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 361 LFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGIPFVAEAMEVLGGIGYCEDSELPR 419

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G        + R    
Sbjct: 420 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAVRRFQQL 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
           L K  +   R +T ++ +    A + R     IA+
Sbjct: 480 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAE 514


>gi|213648985|ref|ZP_03379038.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 529

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 174/446 (39%), Positives = 256/446 (57%), Gaps = 7/446 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQL 468
             GSGN M LDVL +L K   +++ L
Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVL 449


>gi|332531004|ref|ZP_08406926.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
 gi|332039565|gb|EGI75969.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
          Length = 554

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 184/463 (39%), Positives = 267/463 (57%), Gaps = 27/463 (5%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +HQ  D     NQP   + +N +  + ++  AL  + P +  K LE LG+   S T Q  
Sbjct: 1   MHQTHD---VFNQPAPLVDVNLFEGNLAMRDALKVHAPGLDLKPLEALGQLAGSATLQVH 57

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQA 132
           AR+AN + PQL  +   G R D+VEFHP++H L+  ++  GLH S W D +      + A
Sbjct: 58  ARLANAHGPQLRTHDRQGYRIDEVEFHPSYHILMAAAMKAGLHGSPWLDNT------RNA 111

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H +RAA   L  +LE   L   S+T A   AL     +H++W+P + +R YDP       
Sbjct: 112 HVLRAACFMLFTELEPSMLCPISMTYAVTPALRANAAIHQEWSPGLGARAYDPALTLYKH 171

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + +G+G+TEK+GG+D+ A T++    G       Y L+GHKWF S+PMSDAF++LAQ
Sbjct: 172 KAGLTMGMGMTEKQGGSDVRANTTRAEPDGHDAWGARYRLTGHKWFFSAPMSDAFLVLAQ 231

Query: 249 VEGRVGCFLVPRLLED--------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
               + CF +PR+L +        G  N L  QRLK+K+GN++NA+ E+EF     +L+G
Sbjct: 232 TANGLSCFFLPRVLPEALSGSSTQGQHNALRIQRLKDKLGNKANASSEVEFEGALAWLVG 291

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +M  +  LD A+ S   MR +L +A+H+ R+R   G  LI+QP+MK  +A
Sbjct: 292 EEGRGIPQILEMGTMTRLDCALGSSGLMRQALTQALHHTRQRLAFGKTLIEQPLMKNVLA 351

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+AL+  AATAL+ RLA +FD+      E A AR++ P+ K+W CK       EAMEC+G
Sbjct: 352 DLALESEAATALALRLARTFDQPDD-PHEKAMARLLTPVAKFWICKRGAGFAQEAMECLG 410

Query: 421 GSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+GY+EE     +AR YRE P NSI  G+GN M LD+L  L K
Sbjct: 411 GNGYVEEGGEGVLARIYREMPVNSIWEGAGNIMALDLLRGLRK 453


>gi|161523296|ref|YP_001578308.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189351932|ref|YP_001947560.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
 gi|160340725|gb|ABX13811.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189335954|dbj|BAG45024.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
          Length = 550

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 191/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL          +L+  G  + S     LA  AN +TP+L
Sbjct: 10  NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           + +   G R D+VEFHPAWHALL    ++G   S+  R      R+      AA  YL  
Sbjct: 70  NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM     L+
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDVL  + +  +    LF+ L + LG+   ++   +  LR  ++   +
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPRIRAALDALRAMLAAPAD 482

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR   E++AL + A  L R     ++D F+  R      ++   + G F+  H I
Sbjct: 483 TLEASARLFAERLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538

Query: 556 D 556
           D
Sbjct: 539 D 539


>gi|262204088|ref|YP_003275296.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087435|gb|ACY23403.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 559

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 290/561 (51%), Gaps = 34/561 (6%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELAR 75
           QP  +   LNQ    + +N Y  +++L   ++   +     EL  +G  V S   Q  A+
Sbjct: 10  QPHLTHEVLNQSQPRVDVNEYELNTVLQEAVSRHDAGWADAELREIGALVGSEQFQHDAK 69

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN  TP LH +   G R D+VE+HP++H ++  +I  G H   W    +P  +  +H  
Sbjct: 70  LANTITPTLHTFDRWGRRIDEVEYHPSYHRIISAAISHGAHTRCW---ADP--QPGSHVA 124

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA   L  Q+E GH    S+T A + +L   P V   W PK  S EY P   A   K S
Sbjct: 125 RAAAFMLFGQIEPGHACPVSMTHAVIPSLELQPDVAALWVPKALSSEYSPELSA--DKPS 182

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEG 251
              G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG
Sbjct: 183 AIFGMSMTEKQGGSDVRANTTVARPAGAGGPGTEYLLTGHKWFCSAPMSDAFLVLAQAEG 242

Query: 252 RVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             G    CFL+PR+L DG+ N    QRLK+K+GN+SNA+ E+E   T  +++G+      
Sbjct: 243 PGGEGLSCFLLPRVLPDGTHNVFRIQRLKDKLGNKSNASSEIELDGTVAYMVGEPGRGVR 302

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S +GMR S+AEA+ +AR R+  G  L+DQP M   +AD+AL+  
Sbjct: 303 TIIEMVAQTRLDCVLGSAAGMRQSVAEAVWHARHRNAFGARLVDQPAMTAVLADLALESE 362

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT  + RLA + DE    SE  A+ R+   + KYW CK  P    E++EC+GG+GY E+
Sbjct: 363 AATVTAMRLARAHDEDADDSER-AFRRLATAVAKYWICKRGPHHAYESLECLGGNGYTED 421

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +A  YRE P  ++  GSGN + LDVL  + +         + + +  GS       +L
Sbjct: 422 FPLAMRYREQPVMAVWEGSGNVIALDVLRAMTREPESVAAFDAEVSKARGSH-----PVL 476

Query: 488 RDSISLCKEDKG------------LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
              +   + D G             AR + E +ALA  A+ L +     +A+ F+  R  
Sbjct: 477 DAHLDRLRVDLGELARLDAAGAQRRARSVVEGMALALEASLLVQYSPTPVAEAFVGARLG 536

Query: 536 DNCHSTHCMLHGRFNAAHIID 556
            +    +  L G  +   I+D
Sbjct: 537 ADRGFEYGTLPGGADLGAILD 557


>gi|206558451|ref|YP_002229211.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198034488|emb|CAR50353.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 550

 Score =  306 bits (784), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 288/527 (54%), Gaps = 18/527 (3%)

Query: 19  SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           +DS  A+ NQ    +  N +++D +L  AL          +L+     + S     LA  
Sbjct: 2   TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYAARLGSADTARLADE 61

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +TP+L+ +   G R D+V+FHPAWHALL +  H+G   S+  R      R+      
Sbjct: 62  ANRHTPELNTFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFRD----ARRGRWAAT 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K ++
Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRAI 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251
             G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G
Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAG 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
              CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +
Sbjct: 237 SPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA +
Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ RLA++F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IA
Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488
           R +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+   ++   +  LR
Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             ++   +  +   R   +++AL + A  L R     +AD F+  R 
Sbjct: 475 AMLAAPADTLEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRL 521


>gi|167813734|ref|ZP_02445414.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
          Length = 453

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 177/439 (40%), Positives = 253/439 (57%), Gaps = 14/439 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 19  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  +  A   R A  +L A
Sbjct: 79  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--QPGAMAARCAGYFLHA 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 134 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 193

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258
           K+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + G  CF V
Sbjct: 194 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 253

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     L
Sbjct: 254 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 313

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA+
Sbjct: 314 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 373

Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +F+E A +RS +A  + RI+ P  K+W CK       EAME  GG+GY+E   +AR YRE
Sbjct: 374 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 433

Query: 437 SPANSILLGSGNAMVLDVL 455
           +P NSI  GSGN M +DVL
Sbjct: 434 APVNSIWEGSGNVMCIDVL 452


>gi|221214279|ref|ZP_03587251.1| protein AidB [Burkholderia multivorans CGD1]
 gi|221165934|gb|EED98408.1| protein AidB [Burkholderia multivorans CGD1]
          Length = 550

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 190/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL          +L+  G  + S     LA  AN +TP+L
Sbjct: 10  NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           + +   G R D+VEFHPAWHALL    ++G   S+  R      R+      AA  YL  
Sbjct: 70  NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM     L+
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDVL  + +  +    LF+ L + LG+   ++   +  LR  ++   +
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPRIRAALDALRAMLAAPAD 482

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR   +++AL + A  L R     ++D F+  R      ++   + G F+  H I
Sbjct: 483 ALEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538

Query: 556 D 556
           D
Sbjct: 539 D 539


>gi|229491237|ref|ZP_04385065.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321975|gb|EEN87768.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 545

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 187/534 (35%), Positives = 289/534 (54%), Gaps = 8/534 (1%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ P  I  +A     +L AL     S   + +  +G    S  AQE   +A  + P L 
Sbjct: 9   NQVPPLIDYDAAEYAPILEALHREGASDALEGVHRVGIRAGSAQAQEWGDLAEEHPPVLR 68

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V + PA+H L+  ++  GLH + W    +P     AH +RAA++ +  Q
Sbjct: 69  THDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPW---VDP--NPHAHLVRAAKMAVWGQ 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            +AGH    S+T A + AL     +   + P + +R YD   KAP+ K  +  G+ +TEK
Sbjct: 124 TDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIAGMSMTEK 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +PR+L DG
Sbjct: 184 QGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPDG 243

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           S N +  QRLK+K+GN SNA+ E+E+ +   +++G+       + +M  +  LD  I + 
Sbjct: 244 SLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRLDCTIGTA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GMRV   +A+H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   D A +
Sbjct: 304 TGMRVGTMQAVHHATHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHATA 363

Query: 386 RSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               A A  RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+P  S+  
Sbjct: 364 GDAHASALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502
           GSGN   LD L  + K     +  F  L++  G  G   + +  L+ +     + +  AR
Sbjct: 424 GSGNVAALDTLRAMAKQPETLQVFFDELKRASGVDGHFDQAVRDLQAAFGDFDDIEYRAR 483

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +   +ALA  A+ L R G   +AD F  +R  ++  S    L    + A I++
Sbjct: 484 KIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGVDVAPILE 537


>gi|284031260|ref|YP_003381191.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810553|gb|ADB32392.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 560

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 194/532 (36%), Positives = 286/532 (53%), Gaps = 28/532 (5%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P   G+N ++ D  L  AL  +        L  +GE   +  A   A  AN + P L
Sbjct: 9   NQAPPLQGVNFFTQDQALGDALRPHADLAKDSGLTAIGELAGTQEALSHALPANQHPPVL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHP+WH L+ +++  GL  + W        R   H  RAA  Y+ +
Sbjct: 69  KTHDRYGHRVDEVEFHPSWHWLMDKAVGFGLQAAPWTSD-----RPAPHLARAAGFYVWS 123

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E GH    S+T A++ AL T+ R+  +W P++ + EYD        K  V  G+G+TE
Sbjct: 124 QVEPGHACPVSMTYAAVPALRTSDRLAAEWIPRLAAPEYDVRRLPVADKAGVLAGMGMTE 183

Query: 205 KRGGTDI------AAITSQGQKIS--------------DGIYCLSGHKWFLSSPMSDAFI 244
           K+GG+D+      A  + +G + +              D  Y L+GHKWF S+P +D F+
Sbjct: 184 KQGGSDVRSNLTTATPSRRGSEAAGAPSGVGAATPTGADDEYLLTGHKWFCSAPQADVFL 243

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LAQ    + CF+VPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T G+ LGD   
Sbjct: 244 VLAQAPEGLSCFVVPRVLADGNRNAFALQRLKDKLGNRSNASSEVEFHGTVGYRLGDEGT 303

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M     LD  + S + MR +L EA  +   R   GG+L ++P M+  +AD+AL
Sbjct: 304 GVRTIIEMVAATRLDCVLGSAALMRRALVEATWHTSYRSAFGGLLRNKPAMRNVLADLAL 363

Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AATAL  RLA + D A++  E+A A+ RI  P+ K+W CK  PA++AEA+EC+GG+G
Sbjct: 364 ESEAATALGMRLAAAVDAAEAGDEQAKAFRRIALPLAKFWVCKRTPAMVAEALECLGGNG 423

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGSSGKK 482
           Y+EE  +   +RESP NSI  GSG    LDVL  L +  +L   L      Q        
Sbjct: 424 YVEESGLPLLFRESPLNSIWEGSGTVNALDVLRALRRPESLQAWLLEVGAAQGADPRLDA 483

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +T + +++S   E +  AR L  ++A    A+ L R    D+AD F+ +R 
Sbjct: 484 AVTDVLEALSDVSEAEAGARRLAARMAACLQASLLVRYSPPDVADAFVASRL 535


>gi|296138746|ref|YP_003645989.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026880|gb|ADG77650.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 549

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 185/518 (35%), Positives = 270/518 (52%), Gaps = 13/518 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ    +  +A     LL A+ +   +   +E+   G    S  A      AN + P L
Sbjct: 8   FNQATPLVDYDAAQYPPLLDAVRSAGATDSLEEIHATGRRAGSAEAIAWGEQANAHPPVL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V + PA+H L+  +I  GLH + W+ S  P     AH  RAA+  +  
Sbjct: 68  KTHDRFGNRIDEVTYDPAYHQLMSAAIEQGLHAAPWE-SDSP----HAHLTRAAKFSVWT 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            ++AGH    S+T A++ AL  TP +   + P + +R YDP  + P  K  +  G+ +TE
Sbjct: 123 SVDAGHTCPISMTYAAVPALRHTPELAAQYEPLLAARVYDPVLRVPTTKRGLTAGMSMTE 182

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+ A T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + C LVPR+L D
Sbjct: 183 KQGGSDVRAGTTRAAPQPDGSYLLTGHKWFTSAPMSDMFLTLAQAPGGLSCVLVPRILPD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N    QRLK+K+GN SNA+ E+E+    G L+G+       + +M  +  LD  I S
Sbjct: 243 GSRNRFHLQRLKDKLGNHSNASSEIEYDGAVGHLVGEEGAGVRTIVEMVNMTRLDCTIGS 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR+   +A H+   R+  G +LIDQP+M+  +AD+A++  AAT ++  LA   D A+
Sbjct: 303 AALMRIGTQQAAHHVAHRNAFGAVLIDQPLMRNVLADLAVEAEAATTVAMWLAELTDLAQ 362

Query: 385 S------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +       S  A   RI   I+K+  CK  P   AEA+EC GG+GY+EE  + + YRE+P
Sbjct: 363 AGATMADGSPAADLRRIALAISKFHVCKRGPIHAAEAIECFGGNGYVEESGMPKLYREAP 422

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
             SI  GSGN   LDVL    +       LF  L+   G+  +    +  L+D +S   +
Sbjct: 423 LLSIWEGSGNVAALDVLRAAGRQPATVAALFGFLDGAAGADERLDAAVIRLKDELSDVDQ 482

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR + E  ALA   A L   G    AD F   R 
Sbjct: 483 LEYRARRVVEAAALAIQGALLVTRGEQAAADAFCATRL 520


>gi|238892666|ref|YP_002917400.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae NTUH-K2044]
 gi|238544982|dbj|BAH61333.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 551

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/458 (38%), Positives = 256/458 (55%), Gaps = 9/458 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H  + ++F  NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 5   DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 63  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 119 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD       + 
Sbjct: 239 TGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 299 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 AFLFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            R YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 455


>gi|221202167|ref|ZP_03575202.1| protein AidB [Burkholderia multivorans CGD2M]
 gi|221208772|ref|ZP_03581771.1| protein AidB [Burkholderia multivorans CGD2]
 gi|221171404|gb|EEE03852.1| protein AidB [Burkholderia multivorans CGD2]
 gi|221177961|gb|EEE10373.1| protein AidB [Burkholderia multivorans CGD2M]
          Length = 550

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL          +L+  G  + S     LA  AN +TP+L
Sbjct: 10  NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           + +   G R D+VEFHPAWHALL    ++G   S+  R      R+      AA  YL  
Sbjct: 70  NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATPAGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM     L+
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDVL  + +  +    LF+ L + LG+   ++   +  LR  ++   +
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPQIRAALDALRAMLAAPAD 482

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR   +++AL + A  L R     ++D F+  R      ++   + G F+  H I
Sbjct: 483 TLEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538

Query: 556 D 556
           D
Sbjct: 539 D 539


>gi|330003382|ref|ZP_08304597.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3]
 gi|328536992|gb|EGF63284.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3]
          Length = 550

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/458 (38%), Positives = 256/458 (55%), Gaps = 9/458 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H  + ++F  NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +    E+A+AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDR-RDDVRESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            R YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454


>gi|209963362|ref|YP_002296277.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209956828|gb|ACI97464.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 540

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 196/531 (36%), Positives = 277/531 (52%), Gaps = 25/531 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ--ELARMANYNTP 82
            NQPP   G+N +S D+ LV  +      VH E  L      + TA+  +    AN   P
Sbjct: 16  FNQPPPLEGLNLFSGDTALVEAVRKAGGGVH-EARLAALGARAGTAEVIDWGVEANRRIP 74

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L ++   G R D+V FHPA+H L+R  +  G     WD S         H   AA LYL
Sbjct: 75  ELDSFDRYGRRIDEVRFHPAYHELMRFGLDSGFAAIAWDGS------PAGHVGHAAILYL 128

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
             Q ++G +   ++T A++ AL   P V  +W P+I +  YDP  +   +K  V IG+ +
Sbjct: 129 SGQADSGTICPMTMTYAAVPALRVEPAVAAEWVPRILAGRYDPAVRPAGEKAGVTIGMAM 188

Query: 203 TEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           TEK+GG+D+ A T++      +G Y L+GHKWF S+PM DAF+ LA  EG + CFLVPR 
Sbjct: 189 TEKQGGSDVRANTTRAVPTGQEGWYSLTGHKWFCSAPMCDAFLTLAYAEGGLTCFLVPRW 248

Query: 262 LEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L DG  N G    RLK+K+G+RSNA+ E+E+       +G        +  M     LD 
Sbjct: 249 LPDGERNPGFRVMRLKDKLGDRSNASSEIEYHGALARRVGPEGRGVATIIQMVQHTRLDC 308

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S   MR ++A+A+ +   R      L+DQP M   +AD+A++  AATAL FRLA +F
Sbjct: 309 VVGSAQIMRGAVAQALWHTANRSAFQRRLVDQPAMAAVLADLAVETEAATALGFRLARAF 368

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E   AR++ P+ KYW CK  P V+ EAMEC+GG+GYIE   + R +R+SP N
Sbjct: 369 DA------EDPVARLLTPVAKYWVCKRTPGVVYEAMECLGGAGYIETGPMGRLFRQSPLN 422

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN + LDVL  + +       L   L    G +      I    I L +  +  
Sbjct: 423 AIWEGSGNVIALDVLRAMAREPESAAALKDYLTAQAGRNPDYDDWIA--GIDLRRVTEAT 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           AR L E++ALA+ AA L     N +AD F   R           ++G F+A
Sbjct: 481 ARMLVERLALAAQAAVLLEWD-NPLADTFCSLRL-----RARGAMYGAFDA 525


>gi|206580739|ref|YP_002240862.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342]
 gi|206569797|gb|ACI11573.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342]
          Length = 545

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/456 (38%), Positives = 256/456 (56%), Gaps = 9/456 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD+ L  A++          L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWLED----AREGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-REDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449


>gi|291619081|ref|YP_003521823.1| AidB [Pantoea ananatis LMG 20103]
 gi|291154111|gb|ADD78695.1| AidB [Pantoea ananatis LMG 20103]
          Length = 542

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 190/518 (36%), Positives = 283/518 (54%), Gaps = 12/518 (2%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L  AL         + L  +G  + S  + EL R+AN + P+
Sbjct: 9   FNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANASPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH Y   G R D V FHPAWH L++      LH    + S++P V+  A   RAAR  L 
Sbjct: 69  LHRYDARGVRLDDVRFHPAWHVLMQGLCASRLH----NLSWQPDVQPNASVARAARFILH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T A++  L    P   + W   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+   T++ + +    S   Y + GHKWF S P SDA ++LAQ +  + CF +
Sbjct: 185 TEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PRLL DGS N +  +RLK+K+GNRSNA+ E+EF    G+LLG+       +  M  +  L
Sbjct: 245 PRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFREATGWLLGEEGEGVRLILKMAGMTRL 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR + + A+++A +R V G  L+DQP+M++ +A  AL +   TAL  RLA 
Sbjct: 305 DCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLLRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++  + +   EAA+AR+  P  KY  CK     IAEAME +GG GY E+  + R YR+ P
Sbjct: 365 AW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLYRDIP 423

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            NSI  GSGN M LDVL ++ + +   + L    +   G +     +  + ++ L K D+
Sbjct: 424 VNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLSKMDE 483

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
             AR LT+++   ++AA L +     +AD +  +++LD
Sbjct: 484 SQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLD 520


>gi|121592516|ref|YP_984412.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604596|gb|ABM40336.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 551

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 182/501 (36%), Positives = 274/501 (54%), Gaps = 30/501 (5%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA  AN +TPQL  +   G+R D +EFHPAWH L+     +GL      R F+   R   
Sbjct: 58  LAEQANRHTPQLQRFDTRGQRIDALEFHPAWHQLMALYRGEGLI----SRPFQDE-RPGR 112

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
               AA  YL  Q+E G L   ++T A++  L   P + +    +++S  YDP +     
Sbjct: 113 WSAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTAYDPRDLPVAD 172

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248
           K S+ +G+G+TEK+GG+D+ A T+    I  G     Y L GHKWF S+P  DA +++A+
Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVATPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVAR 232

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               G   CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+     
Sbjct: 233 TGEGGPFACFYVPRWRLDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGI 292

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     L+  + S + +R +  +AIHYARRRH  G  L +QP+M+  +AD+AL+ 
Sbjct: 293 PTIIEMASYTRLNCVVGSAAILRQATVQAIHYARRRHAFGKALAEQPLMRAVLADLALES 352

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ RLA ++ E  S   + A+ R+M P  K+W CK A  +  EAME +GG+GY+E
Sbjct: 353 EAALHLAMRLAQAY-EHDSTPAQRAWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVE 411

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSG 480
           +  +AR +RE+P NSI  GSGN M LDVL  L++       L + L      E  + ++ 
Sbjct: 412 DGVMARLFREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAA 471

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           +++  +L    +  ++ +GL R LT+++ L + A  L +     +AD F+  R  D+   
Sbjct: 472 RELQALL---ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADS--- 525

Query: 541 THCMLHGRFNAAHIIDSLYLD 561
                 G    A  ID+  LD
Sbjct: 526 ------GAGRVAGAIDTRGLD 540


>gi|324112216|gb|EGC06194.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia
           fergusonii B253]
          Length = 541

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/519 (35%), Positives = 281/519 (54%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SDS L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 59  GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  + AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFLPRFLPDGQRNAIHLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +   T+L
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++  +EA + R+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 355 LFRLARAWDR-RTDEKEALWTRLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G +      + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQNRHFDRAVRRFQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  +   R +T ++ +    A + R     IA+ + +
Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAENWCQ 512


>gi|300692874|ref|YP_003753869.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299079934|emb|CBJ52611.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 557

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 292/548 (53%), Gaps = 29/548 (5%)

Query: 18  PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75
           P+D+     NQ P     N ++SD+ L   +       H + L   GE + +      A 
Sbjct: 2   PADATHRVFNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRAFGEMLGTPRTLAWAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN   P+LH +   GER D+V F PAWHALL      GL    +    EP  R  A   
Sbjct: 62  EANQYPPELHTHTRTGERIDRVRFDPAWHALLGLIRSQGLQALPFA---EP--RAGAWAA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R A  ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QK++
Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASISVLRKETPLFADLAPRLYAREHDARDLPWRQKSA 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247
           + IG+G+TEK+GG+D+ + T+    +            + L+GHKWF S+PM DA +++A
Sbjct: 177 ILIGMGMTEKQGGSDVRSNTTVAVPLGGQDGGEGRGATHALTGHKWFFSAPMCDAHLVVA 236

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++   +G + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+   
Sbjct: 237 RMGAEDGPLSCFFVPRFRDDGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGR 296

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL
Sbjct: 297 GIPTIIEMATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AAT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY
Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           +EE  +AR YRE+P NSI  GSGN M LDVL  + +  +   +L   +  D  + G + +
Sbjct: 417 VEESPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRTPDDALRLMQDI--DARAQGHRTV 474

Query: 485 TILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
                ++       G      AR + + +AL + AA +      D A+ F+ +RF    H
Sbjct: 475 RAELAALQALLHQSGDIQETSARRVAQGLALTAQAALMLAHAHADDAERFIASRF----H 530

Query: 540 STHCMLHG 547
             H  + G
Sbjct: 531 HQHGRVFG 538


>gi|83745987|ref|ZP_00943043.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207741993|ref|YP_002258385.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83727381|gb|EAP74503.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593379|emb|CAQ60306.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 553

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 288/538 (53%), Gaps = 28/538 (5%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N ++SD+ L   +       H + L   GE + +      A  AN   P+
Sbjct: 10  FNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANRYLPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A  ++ 
Sbjct: 70  LHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG+G+T
Sbjct: 125 AQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y L+GHKWF SSPM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSSPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  + GS N +  QRLK+K+GN SNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNCSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMAL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  + +  +   +L     QD+G  + G + +     ++   
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480

Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               G      AR + + +AL + AA +      D A+ F+ +RF    H  H  + G
Sbjct: 481 LHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534


>gi|207727600|ref|YP_002255994.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590839|emb|CAQ56451.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 553

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/538 (35%), Positives = 287/538 (53%), Gaps = 28/538 (5%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N ++SD+ L   +       H + L   GE + +      A  AN   P+
Sbjct: 10  FNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANRYPPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A  ++ 
Sbjct: 70  LHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG+G+T
Sbjct: 125 AQIESGSLCPATMTFASISVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y L+GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  + GS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMAL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  + +  +   +L     QD+G  + G + +     ++   
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480

Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               G      AR   + + L + AA +      D A+ F+ +RF    H  H  + G
Sbjct: 481 LHQSGDIQEAAARRGAQGLVLTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534


>gi|325499722|gb|EGC97581.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ECD227]
          Length = 541

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 278/515 (53%), Gaps = 9/515 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SDS L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 59  GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  + AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +   T+L
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++  +E  +AR+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 355 LFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAVRRFQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
           L K  +   R +T ++ +    A + R     IA+
Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAE 508


>gi|156932415|ref|YP_001436331.1| isovaleryl CoA dehydrogenase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530669|gb|ABU75495.1| hypothetical protein ESA_00194 [Cronobacter sakazakii ATCC BAA-894]
          Length = 544

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 189/521 (36%), Positives = 280/521 (53%), Gaps = 13/521 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD+ L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPVALNNSNLYLSDTALREAVLREGAGWDAELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   GER D V FHPAWH L++    + +H   W  +     R+ A 
Sbjct: 59  GRLANANPPELLRYDARGERLDDVRFHPAWHLLMQGLFANRVHNLPWLET----AREGAL 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P +  DW   + S  YD       Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWQTPLASDRYDSHLLPGAQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + IG+G+TEK+GG+D+ + T++ + ++       Y L GHKWF S P SDA ++LAQ
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGPGEAYRLVGHKWFFSVPQSDAHLVLAQ 234

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       
Sbjct: 235 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 294

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +   D A+ S   MR +LA A+++  +R   G  LIDQP+M++ +  +AL++  
Sbjct: 295 ILRMGGMTRFDCALGSHGLMRRALAVALYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 354

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            TAL FRLA ++++ +S   E A+AR+  P  KY  CK     +AEAME +GG GY EE 
Sbjct: 355 QTALLFRLARAWEQRES-PHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 413

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + R YRE P NSI  GSGN M LDVL +L +   + E L    +   G          +
Sbjct: 414 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSHEFDAVKGQDRHFDRAWRQ 473

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
            +  L + D+   R +T ++ L +S A + R+    +A  +
Sbjct: 474 LAGQLRRPDEAAGRAITTQLFLLASGAQVLRSLTPPLAQAW 514


>gi|283786860|ref|YP_003366725.1| acyl CoA dehydrogenase [Citrobacter rodentium ICC168]
 gi|282950314|emb|CBG89961.1| probable acyl CoA dehydrogenase [Citrobacter rodentium ICC168]
          Length = 542

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 188/523 (35%), Positives = 277/523 (52%), Gaps = 15/523 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD  L   +A   +    EL   +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPLPLNNSNLFLSDGALREAVAREGAGWDSELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+ N   P+L  Y P G+R D V FHPAWH L++    + +H   W    E   R  + 
Sbjct: 59  GRLVNAWPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCTNRVHNLPW----EEEARAGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P    +W   + S  YD       Q
Sbjct: 115 VARAARFILHAQVEAGTLCPITMTFAATPLLQQMLPAPFSEWLTPLMSDRYDSHLMPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ + R
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAERLEDGTYRLVGHKWFFSVPQSDAHLVLAQAQAR 234

Query: 253 VG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G  CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       + 
Sbjct: 235 GGLSCFFVPRFLPDGRRNAVRLERLKDKLGNRSNASCEVEFDDAIGWLLGEEGEGIRHIL 294

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S   MR + + AI++A +R V G  LIDQP+M++ ++ +AL +   T
Sbjct: 295 KMGGMTRFDCALGSHGLMRRAFSVAIYHAHQRQVFGKALIDQPMMRQLLSRMALQLEGQT 354

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  +  ++E   AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 355 ALLFRLARAWDR-RGEAKEQLLARLFTPAAKFAVCKSGIPFVAEAMEVLGGIGYCEESEL 413

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
            R YRE P NSI  GSGN M LD+L +L K     E L     +  G      + +  L+
Sbjct: 414 PRLYREMPVNSIWEGSGNVMCLDILRVLSKHAGAEEMLIGMFSEVRGQDRHFDRAVRQLQ 473

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             +    E++G  R +   I L    A + R     +A  + +
Sbjct: 474 QRLRNPVEEQG--RDIARLIYLLGCGARMLRHASPPVAQAWCQ 514


>gi|187930703|ref|YP_001901190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187727593|gb|ACD28758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 553

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 287/542 (52%), Gaps = 28/542 (5%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN   P+
Sbjct: 10  FNQVPDLTGFNPFTSDATLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANSYHPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D + F PAWHALL      GL    +    +P  R  A   R A  ++ 
Sbjct: 70  LHTHSRTGERIDAIRFDPAWHALLGLMRSQGLQALPFA---DP--RPGAWAARTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G+G+T
Sbjct: 125 AQIESGTLCPATMTFASIPVLQNETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTVEATGEAMEVWGGNGYVEEGPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  + +  +   +L      D+G  + G + +     ++   
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLV----HDIGERAHGHRAVRAELAALQAM 480

Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
               G      AR + + +AL + AA +      D A+ F+ +RF    H  H  + G  
Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF----HHQHGRVFGTL 536

Query: 550 NA 551
           + 
Sbjct: 537 DG 538


>gi|152973052|ref|YP_001338198.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150957901|gb|ABR79931.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 550

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 176/458 (38%), Positives = 255/458 (55%), Gaps = 9/458 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H  + ++F  NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + +  +++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVVLYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDH-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            R YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454


>gi|327395413|dbj|BAK12835.1| protein AidB [Pantoea ananatis AJ13355]
          Length = 542

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 189/518 (36%), Positives = 284/518 (54%), Gaps = 12/518 (2%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L  AL         + L  +G  + S  + EL R+AN + P+
Sbjct: 9   FNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANASPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH Y   G R D V FHPAWH L++      LH    + S++P V+  A   RAAR  L 
Sbjct: 69  LHRYDARGVRLDDVRFHPAWHVLMQGLCASRLH----NLSWQPDVQPNASVARAARFILH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T A++  L    P   + W   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+   T++ + +    S   Y + GHKWF S P SDA ++LAQ +  + CF +
Sbjct: 185 TEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PRLL DGS N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  +  +  L
Sbjct: 245 PRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFRDATGWLLGEEGEGVRLILKIAGMTRL 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR + + A+++A +R V G  L+DQP+M++ +A  AL +   TAL  RLA 
Sbjct: 305 DCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLLRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++  + +   EAA+AR+  P  KY  CK     IAEAME +GG GY E+  + R YR+ P
Sbjct: 365 AW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLYRDIP 423

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            NSI  GSGN M LDVL ++ + +   + L    +   G +     +  + ++ L K D+
Sbjct: 424 VNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLSKMDE 483

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
             AR LT+++   ++AA L +     +AD +  +++LD
Sbjct: 484 SQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLD 520


>gi|262045386|ref|ZP_06018410.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037304|gb|EEW38551.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 528

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 176/458 (38%), Positives = 255/458 (55%), Gaps = 9/458 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H  + ++F  NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +  + E+ +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDH-RDDARESVWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            R YRE P NSI  GSGN M LDV+ +L K     E L
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454


>gi|309780304|ref|ZP_07675055.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921007|gb|EFP66653.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 553

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 287/542 (52%), Gaps = 28/542 (5%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN   P+
Sbjct: 10  FNQVPDLTGFNPFTSDTTLQGALERLGGGWNAGALQAFGDQLGAPETLQWAAEANTYHPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D + F PAWHALL      GL    +    +P  R  A   R A  ++ 
Sbjct: 70  LHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFA---DP--RAGAWAARTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G+G+T
Sbjct: 125 AQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494
           +P NSI  GSGN M LDVL  + +  +   +L      D+G  + G + +     ++   
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLV----HDIGERAQGHRAVRAELAALQAM 480

Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
               G      AR + + +AL + AA +      D A+ F+ +RF    H  H  + G  
Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF----HHQHGRVFGTL 536

Query: 550 NA 551
           + 
Sbjct: 537 DG 538


>gi|241664892|ref|YP_002983252.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240866919|gb|ACS64580.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 553

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 181/523 (34%), Positives = 281/523 (53%), Gaps = 20/523 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN   P+
Sbjct: 10  FNQVPDLTGFNPFTSDTTLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANTYHPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D + F PAWHALL      GL    +    +P  R  A   R A  ++ 
Sbjct: 70  LHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFA---DP--RAGAWAARTAGYFMQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G+G+T
Sbjct: 125 AQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRSNTTVATPLRGEARGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M    
Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR YRE
Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMARLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P NSI  GSGN M LDVL  + +  +   +L   + +   + G + +     ++     
Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLVHDIAER--AQGHRAVRAELAALQAMLH 482

Query: 497 DKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             G      AR + + +AL + AA +      D A+ F+ +RF
Sbjct: 483 QPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF 525


>gi|254250963|ref|ZP_04944281.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124893572|gb|EAY67452.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 550

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 187/539 (34%), Positives = 291/539 (53%), Gaps = 20/539 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL          +L+  G  + S     LA  AN + P+L
Sbjct: 10  NQFDELVDYNLFATDVALREALARAGADWAAPQLDAYGARLGSADTARLADEANRHPPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHPAWH LL    ++GL  S+  R      R+      AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGL-VSLAFRD----TRRGRWAATAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S   G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSTWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M     L+
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ R+A++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRVADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDVL  + +  +    LF  L + LG+   ++   +  LR  +++  +
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFDELTE-LGAGEPRIRAALDALRAMLAVPAD 482

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
             +  AR   +++AL + A  L R     ++D F+  R      S+   + G F+   I
Sbjct: 483 TLEAAARLFAQRLALVAQACLLRRDAPAAVSDAFIATRL---AESSWGRIAGGFDPQTI 538


>gi|317508795|ref|ZP_07966440.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316252904|gb|EFV12329.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 563

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 188/540 (34%), Positives = 283/540 (52%), Gaps = 23/540 (4%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q H         NQ P  +G +      L   L          E++ LGE   S  AQ
Sbjct: 1   MRQTHT------VFNQVPPLVGWSLADHPVLAETLQRENAHAARAEIQSLGELAGSAEAQ 54

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS-------- 123
           +   +A  + PQL  Y   G R D+V + P++H L++ ++  GLH + W  S        
Sbjct: 55  QWGDLAEAHPPQLKNYDRYGNRIDEVVYDPSYHQLMKVAVEYGLHGAAWAESGHSPSATE 114

Query: 124 --FEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               P   +    AH  RAA++ +  Q +AGHL   S+T A + AL   P V     PK+
Sbjct: 115 TQHSPSATETQHCAHLARAAKMIVWGQADAGHLCPISMTYAVVPALRANPAVAAAHEPKL 174

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            SR YDP+ +   QK  +  G+ +TEK+GG+D+ A T+      DG Y ++GHKWF S+P
Sbjct: 175 ASRVYDPSLRPIAQKAGLIAGMSMTEKQGGSDVRANTTSAVPQPDGSYRITGHKWFTSAP 234

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           MSD  ++LAQ  G + CF +PR+L DGS N +  QRLK+K+GN+SNA+ E+E+    G+L
Sbjct: 235 MSDLLLVLAQAPGGLSCFYLPRILPDGSRNNMSVQRLKDKLGNKSNASSEVEYDEAVGWL 294

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + +M  +  LD  + + + M ++ A A H+A  R   G  L+DQP+M+  
Sbjct: 295 VGEEGKGVKTIVEMVNMTRLDCTLATSTAMSLATAHAAHHATYRSAFGANLVDQPLMRNV 354

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAME 417
           +AD+A++  A+   +  LA   D+A +  E+A A  RI   ++KY+ CK  P  +AEA+E
Sbjct: 355 LADLAVEAEASLTTALWLAAHVDKATAGDEQAKALLRISLAVSKYFICKRGPVHVAEALE 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           C+GG+GY EE  + R YRE P  SI  GSGN   LD L  + K       LF+  +   G
Sbjct: 415 CLGGNGYTEESRMPRFYREVPLLSIWEGSGNVAALDALRAMAKQPESVALLFAEFDAARG 474

Query: 478 SSGK--KVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  +    +  L+D ++   E  +  AR +   +ALA   + L R G   +AD F  +RF
Sbjct: 475 ADTRFDSSVAALKDELAGGFEAIEHRARRIVGGLALALQGSLLIRHGHPAVADAFAASRF 534


>gi|83858606|ref|ZP_00952128.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83853429|gb|EAP91281.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 567

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 192/523 (36%), Positives = 285/523 (54%), Gaps = 17/523 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +G+N Y+ D++L + ++   + VH E L  +G  V S   Q+LARMAN N P+ 
Sbjct: 33  NQSEPLVGVNWYADDAMLKSALSRNGADVHAERLSSMGAEVGSDGVQDLARMANENPPRF 92

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHPA+HAL+   +  G+  + W       V +  H + AA L LM 
Sbjct: 93  KPFDRFGHRIDEVEFHPAYHALMELGLGHGVSSAAW------TVEQAPHSLHAALLMLMG 146

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             +AG     S+T AS+ AL  +      W   + +  YDP    P +K  + +G+ +TE
Sbjct: 147 TADAGVCCPQSMTYASVPALRKSDWTGP-WIQGVTAGRYDPRFLPPEEKVGLTLGMAMTE 205

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPR 260
           K+GG+D+ A  ++ +     I  L+GHKWF S+PMSD F+ LA      + ++ CFLVPR
Sbjct: 206 KQGGSDVRANATRAESADGDIVTLTGHKWFCSAPMSDGFLTLAYEGDGDDAQLSCFLVPR 265

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG  N +  QRLK+K+G++SNA+ E+E+   +   +G+       + +M     LD 
Sbjct: 266 WTPDGERNTIEIQRLKDKLGDKSNASSEIEYKQAWARRVGEPGRGVRTIIEMVNHTRLDC 325

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              S   +R   A A+ +A RR      LIDQP+M+  +A++A++  AA AL+FR+A SF
Sbjct: 326 LAGSAGLIRNGAAYAVWHADRRSAFQRRLIDQPLMREVLAEMAMEAEAALALAFRVAESF 385

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+A S   EAA AR++ PI KYW CK AP +  EAME  GG+GY+EE  + R +R+SP N
Sbjct: 386 DKADSDPNEAALARLLTPIAKYWICKRAPYLTYEAMEAHGGAGYVEEHPLPRMFRQSPLN 445

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISLCKED 497
           +I  GSGN + LDVL  L +     E L + L    G       ++  + R +     E 
Sbjct: 446 AIWEGSGNVIALDVLRALARDEAAREALTAELAPAYGRHPALDARLNALTRMAAGGIGEA 505

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
              AR   E  A A +A+ L RAG++  AD ++  R  +N  S
Sbjct: 506 D--ARRFAEWAATALTASTLIRAGLDPAADAYIGRRIAENPTS 546


>gi|317049747|ref|YP_004117395.1| acyl-CoA dehydrogenase domain-containing protein [Pantoea sp.
           At-9b]
 gi|316951364|gb|ADU70839.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. At-9b]
          Length = 542

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 190/519 (36%), Positives = 279/519 (53%), Gaps = 12/519 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N ++ D  L   +A   +   +E L  +G  + S  + EL R+AN   P+
Sbjct: 9   FNQPQPLSNSNLFTRDLPLCEAVAREGASWDREWLASVGLQLGSAESLELGRLANAQPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   GER D+V FHPAWH L++      LH    + S++P V+  A   RAAR  L 
Sbjct: 69  LLRYDARGERLDEVRFHPAWHLLMQGLCASRLH----NLSWQPDVQPNAMVARAARFMLH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T A++  L    P  + DW   + S  YD  ++    K  + IG+G+
Sbjct: 125 AQVEAGSLCPVTMTHAAIPLLQNYLPAPYLDWRDALLSDRYDAHHQPGSNKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GGTD+ + +++ + +        Y + GHKWF S P SDA ++LAQ  G + CF +
Sbjct: 185 TEKQGGTDVLSNSTRAEPLGGRGPGEAYRIVGHKWFFSVPQSDAHLILAQTAGGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PRLL DG+ N +  +RLK+K+GNRSNA+ E+EF +  G+L+GD       +  M  +   
Sbjct: 245 PRLLPDGARNAIRLERLKDKLGNRSNASCEVEFQDAIGWLMGDEGDGIRLILKMGGMTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR + + A+H+A++R V G  L DQP+M+  +A  AL +   TAL  RLA 
Sbjct: 305 DCALGSHGLMRRAFSIALHHAQQRQVMGKNLSDQPLMRTVLAQQALQLEGQTALLLRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++    S  E   YAR+  P  KY  C+     +AEAME +GG GY EE  + R YRE P
Sbjct: 365 AWSTPVSEHER-LYARLFTPAAKYVICQAGIPFVAEAMEVLGGIGYCEESELPRLYREMP 423

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            NSI  GSGN M LDVL +L + ++    L   LE   G +        +  + L    +
Sbjct: 424 VNSIWEGSGNVMCLDVLRVLNRQSDALVMLSDELEAVKGCNRHFDRRWRQLRLRLGNVPE 483

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
           G AR +T ++   ++AA L       +AD + + +FLD 
Sbjct: 484 GQARAVTTELLQLATAAILLNVAEPPLADGWCQ-QFLDT 521


>gi|24115540|ref|NP_710050.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
 gi|24054870|gb|AAN45757.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
          Length = 460

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 171/438 (39%), Positives = 248/438 (56%), Gaps = 9/438 (2%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD      
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 178

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417

Query: 431 ARHYRESPANSILLGSGN 448
            R YRE P NSI  GSG 
Sbjct: 418 PRLYREMPVNSIWEGSGG 435


>gi|260599467|ref|YP_003212038.1| isovaleryl CoA dehydrogenase [Cronobacter turicensis z3032]
 gi|260218644|emb|CBA33960.1| Protein aidB [Cronobacter turicensis z3032]
          Length = 575

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 188/521 (36%), Positives = 280/521 (53%), Gaps = 13/521 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N + SD+ L   +    +    EL   +G+ + +  + EL
Sbjct: 32  MHWQTHTVF--NQPVALNNSNLFLSDTALREAVLREGAAWDAELLASIGQQLGTAESLEL 89

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN + P+L  Y   GER D V FHPAWH L++    + +H   W  +     R  A 
Sbjct: 90  GRLANAHPPELLRYDARGERLDDVRFHPAWHLLMQGLCANRVHNLPWLET----ARDGAL 145

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P +  DW   + S  YD       Q
Sbjct: 146 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWRTPLASDRYDSHLLPGAQ 205

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + IG+G+TEK+GG+D+ + T++ + ++       Y L GHKWF S P SDA ++LAQ
Sbjct: 206 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGAGEAYRLVGHKWFFSVPQSDAHLVLAQ 265

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       
Sbjct: 266 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 325

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +   D A+ S   MR +LA AI++  +R   G  LIDQP+M++ +  +AL++  
Sbjct: 326 ILRMGGMTRFDCALGSHGLMRRALAVAIYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 385

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            TAL FRLA ++++ +S   E A+AR+  P  KY  CK     +AEAME +GG GY EE 
Sbjct: 386 HTALLFRLARAWEQRES-PHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 444

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + R YRE P NSI  GSGN M LDVL +L +   + E L +  E   G          +
Sbjct: 445 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSNEFEAVKGQDRHFDRAWRQ 504

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
            +  L + D+   R +T ++ L ++ A + R+    +A  +
Sbjct: 505 LAGQLRRPDEAAGRAITTQLFLLATGAQVLRSLTPPLAQAW 545


>gi|304396946|ref|ZP_07378826.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB]
 gi|304355742|gb|EFM20109.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB]
          Length = 542

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 186/519 (35%), Positives = 278/519 (53%), Gaps = 12/519 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD+ L   ++   +   +E L  +G  + S  + EL R+AN   P+
Sbjct: 9   FNQPHPLSNSNLFLSDTPLGEALSREGAGWDREWLASVGRQLGSAESLELGRLANAEPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   GER D+V FHPAWH L++      LH    + S++P VR+QA   RAAR  L 
Sbjct: 69  LLRYDARGERMDEVRFHPAWHLLMQGVCASRLH----NLSWQPTVREQASVARAARFILH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T A++  L T  P   + W   + S  YD   +   QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQTYLPAAFEGWLDPLLSDRYDTHAQPGDQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+   T+     G + +   Y L+GHKWF S P SDA ++LAQ    + CF +
Sbjct: 185 TEKQGGSDLLTSTTHAEPLGARGAGEAYRLTGHKWFFSVPQSDAHLVLAQTPAGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PRLL DGS N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M  +   
Sbjct: 245 PRLLPDGSRNAIQLERLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMGGMTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR + + A+ +A +R V G  L++QP+M++ +A  AL +   TAL  RLA 
Sbjct: 305 DCALGSHGQMRRAFSVAVSHAHQRQVMGKNLVEQPLMRQVLAQQALQLEGQTALLMRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++ +  ++  E  +AR+  P  KY  CK     +AE+ME +GG GY E   + R YR+ P
Sbjct: 365 AWSQ-PAKPHEVTFARLFTPAAKYEICKAGAPFVAESMEVLGGIGYCEASELPRLYRDMP 423

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            NSI  GSGN M LDVL +  +   +   L    E   GS+        +  + L    +
Sbjct: 424 VNSIWEGSGNVMCLDVLRVFARQAEVTAMLSQEFEAVKGSNRHFDTRWRQLRLRLNHVPE 483

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
             AR +T  + L +  A L +     +AD + + ++LD 
Sbjct: 484 EQAREVTRTLLLLAMGAQLLKYAEPPLADAWCQ-QWLDQ 521


>gi|222109323|ref|YP_002551587.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728767|gb|ACM31587.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 551

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 179/501 (35%), Positives = 274/501 (54%), Gaps = 30/501 (5%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA  AN +TPQL  +   G R D +EFHPAWH L+     +GL      R F+   R   
Sbjct: 58  LAEQANRHTPQLQRFDTRGRRIDALEFHPAWHQLMALYRGEGLI----SRPFQDE-RPGR 112

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
               AA  YL  Q+E G L   ++T A++  L   P + +    +++S  YDP +     
Sbjct: 113 WAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTVYDPRDLPVAD 172

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248
           K S+ +G+G+TEK+GG+D+ A T+    I  G     Y L GHKWF S+P  DA +++A+
Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVAAPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVAR 232

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               G   CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+     
Sbjct: 233 TGEGGPFACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGI 292

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     L+  + S + +R +  +AIHYA RRH  G  L +QP+M+  +AD+AL+ 
Sbjct: 293 PTIIEMASYTRLNCVVGSAAILRQATVQAIHYAHRRHAFGKALAEQPLMRAVLADLALES 352

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ RLA ++++  + ++  A+ R+M P  K+W CK A  +  EAME +GG+GY+E
Sbjct: 353 EAALHLAMRLAQAYEDDDAPAQR-AWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVE 411

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSG 480
           +  +AR +RE+P NSI  GSGN M LDVL  L++       L + L      E  + ++ 
Sbjct: 412 DGVMARLFREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAA 471

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           +++  +L    +  ++ +GL R LT+++ L + A  L +     +AD F+  R  D+   
Sbjct: 472 RELQALL---ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADS--- 525

Query: 541 THCMLHGRFNAAHIIDSLYLD 561
                 G    A  ID+  LD
Sbjct: 526 ------GAGRVAGAIDTRGLD 540


>gi|302185136|ref|ZP_07261809.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           642]
          Length = 549

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 176/469 (37%), Positives = 256/469 (54%), Gaps = 19/469 (4%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W    +P  +  A   
Sbjct: 64  LANQHKPEFVSHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWT---DP--QSGAQVA 118

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     K  
Sbjct: 119 RAAMSYLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRG 178

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEG 251
             IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ + 
Sbjct: 179 ATIGMAMTEKQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDK 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       + +
Sbjct: 239 GLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPAIIE 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA A
Sbjct: 299 MVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + 
Sbjct: 359 MTLRMGRALDHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILP 417

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-----EQDLGSSGKKVITI 486
           R YRE+P NS   GSGN   LDVL  L K     + LF  L     ++ L +   K+   
Sbjct: 418 RLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGKLKAA 477

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
            +D+  L    +  AR LTE IA+A     L  AG   ++D F+  R +
Sbjct: 478 FQDTGDL----QYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522


>gi|221069757|ref|ZP_03545862.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714780|gb|EED70148.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 549

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 183/525 (34%), Positives = 282/525 (53%), Gaps = 26/525 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLG-EYVLSCTAQELARMANYNTPQ 83
           NQ P     N ++SD +L   +A   +   + EL+  G EY    T +  A  AN+  P+
Sbjct: 8   NQAPELKDYNVFTSDPVLQRAVARGGAQWREPELQRQGAEYGAEATLRA-AEDANHFEPE 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141
           LH + P G+R D+V FHPAWH ++  +  +G+ C++      P    R+ A     A L+
Sbjct: 67  LHTHSPTGDRIDQVRFHPAWHQMMTIARRNGI-CNL------PFTDARQTAWPAYGASLF 119

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + +Q+E+G     ++T AS+  +   P++H    P + S +YD  +     K S+ +G+G
Sbjct: 120 MHSQIESGSGCPTTMTKASIPLVRLNPQLHAVLGPLLASTDYDARDIPAEGKRSITVGMG 179

Query: 202 LTEKRGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
           +TE++GG+D+ + T++   ++           Y ++GHKWF S+PM D  ++LA+ E R 
Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSLGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             CF VPR   DG  N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M
Sbjct: 240 PTCFFVPRWRPDGRKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L
Sbjct: 300 ATYTRLDCALTSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  LA  F       +  A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R
Sbjct: 360 AMDLAARFGSEDPLDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            +RE+P NSI  GSGN M LDVL  + +  +    L   L+Q        +  +  LR +
Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHLQQAGAEEAVLRTQVDKLRQA 477

Query: 491 ISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           I L  +D +  AR  T+++A+   A  + +   +D A  FL +RF
Sbjct: 478 IMLAPQDLEREARRFTQRLAITVQATLMLQHASSDSAAAFLGSRF 522


>gi|17544840|ref|NP_518242.1| oxidoreductase flavoprotein FAD [Ralstonia solanacearum GMI1000]
 gi|17427129|emb|CAD13649.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 557

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 193/550 (35%), Positives = 291/550 (52%), Gaps = 33/550 (6%)

Query: 18  PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75
           P+D+     NQ P     N ++SD+ L   +       H + L   GE + S      A 
Sbjct: 2   PADATHRVFNQVPDLAHFNPFTSDATLQGALGRLGGGWHADALRAFGETLGSPRTLAWAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN   P+LH +   GER D V F PAWHALL      GL    +    EP  R  A   
Sbjct: 62  EANRYPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFA---EP--RAGAWAA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R A  ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT+
Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTA 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247
           + +G+G+TEK+GG+D+ + T+    +            Y L+GHKWF S+PM DA +++A
Sbjct: 177 ILVGMGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVA 236

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++   +G + CF VPR  +DG  N +  QRLK+K+GN SNA+ E+EF    G L+G+   
Sbjct: 237 RMGAEDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGR 296

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL
Sbjct: 297 GIPTILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AAT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY
Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKK 482
           +EE  +AR YRE+P NSI  GSGN M LDVL  + +  +   +L     QD+G  + G +
Sbjct: 417 VEEGPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLV----QDIGERARGHR 472

Query: 483 VITILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            +     ++       G      AR + + +AL + AA +      D A+ F+ +RF   
Sbjct: 473 AVRAELAALQAMLHQSGDIQEASARRIAQGLALTAQAALMLAHAHADDAERFIASRF--- 529

Query: 538 CHSTHCMLHG 547
            H  H  + G
Sbjct: 530 -HHQHGRVFG 538


>gi|254475449|ref|ZP_05088835.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214029692|gb|EEB70527.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 550

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 191/538 (35%), Positives = 281/538 (52%), Gaps = 12/538 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           N PP     + +S D +L   ++    +    +L   G+        E A  AN + P+L
Sbjct: 17  NTPPHLGDQDLWSQDIVLQEGVLREGAAGSVAKLAQFGKDAGRAEVMEQADEANRHAPEL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+   G R ++V FHP++HAL   ++ +GL    W           AH   AA  Y++ 
Sbjct: 77  QAFDRYGMRINEVRFHPSYHALQDLAVSNGLSNHAWCNPG-----PGAHVTHAALNYMLN 131

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E G +   +++ A++ AL TTP V +DW   + S+ YD  +    +KT + +G+ +TE
Sbjct: 132 QMEGGVMCPLAMSYAAVPALRTTPDVAEDWVHGLLSQRYDRRDIPASEKTGLQMGMFMTE 191

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           K+GG+D+ A ++Q   + DG  Y L+GHK+F S+PMSDAF+ LA   G + CFLVPR   
Sbjct: 192 KQGGSDVRANSTQA--VPDGAGYRLTGHKFFCSAPMSDAFLTLAYAPGGLSCFLVPRFTP 249

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ N    QRLK+K+GNRSNA+ E+E  +T+G L+G        + DM        A  
Sbjct: 250 DGARNRFYLQRLKDKLGNRSNASSEMELQDTWGTLVGPEGRGVRTIIDMVQGTRFYCAFG 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S + MR  L +A+H+ R R      LIDQP+M+  +AD+AL+  AA  LS RL  + DEA
Sbjct: 310 SAALMRQGLLQAVHHTRHRAAFQRRLIDQPLMQNVLADLALETEAALTLSLRLGRAIDEA 369

Query: 384 KSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    A   ARI   I K+W CK A    AE MEC GG GYIEE  + R YRE+P NSI
Sbjct: 370 EAGDARAGKLARIGTAIAKFWICKRAIQHAAETMECHGGPGYIEESPMPRLYREAPVNSI 429

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGL 500
             GSGN + LDVL  L K     E     L    G +    + +  L+  +     D   
Sbjct: 430 WEGSGNVICLDVLRALHKDAETGEVFLKELAPARGGNRDFDQALARLQQDLPSMVADPTS 489

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           AR L+E++A+   A+ L R   + ++D F  +R           L G   +  ++D +
Sbjct: 490 ARHLSEQMAVLWQASLLIRHAPSLVSDAFCSSRLGSRWSGVFGTLRGDAVSRALVDRV 547


>gi|299068312|emb|CBJ39536.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 557

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 193/550 (35%), Positives = 291/550 (52%), Gaps = 33/550 (6%)

Query: 18  PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75
           P+D+     NQ P     N ++SD+ L   +       H + L   GE + +      A 
Sbjct: 2   PADATHRVFNQVPDLAHFNPFTSDATLQGALDRLGGGWHADALRAFGETLGAPQTLAWAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN   P+LH +   GER D V F PAWHALL      GL    +    EP  R  A   
Sbjct: 62  EANRYPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFA---EP--RAGAWAA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R A  ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT+
Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTA 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247
           + IG+G+TEK+GG+D+ + T+    +            Y L+GHKWF S+PM DA +++A
Sbjct: 177 ILIGMGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVA 236

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++   +G + CF VPR  +DG  N +  QRLK+K+GN SNA+ E+EF    G L+G+   
Sbjct: 237 RMGAEDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGR 296

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL
Sbjct: 297 GIPTILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AAT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY
Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKK 482
           +EE  +AR YRE+P NSI  GSGN M LDVL  + +  +   +L     QD+G  + G +
Sbjct: 417 VEEGPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLV----QDIGERARGHR 472

Query: 483 VITILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            +     ++       G      AR + + +AL + AA +      D A+ F+ +RF   
Sbjct: 473 AVRAELAALQAMLHQSGDIQEASARRIAQGVALTAQAALMLAHAHADDAERFIASRF--- 529

Query: 538 CHSTHCMLHG 547
            H  H  + G
Sbjct: 530 -HHQHGRVFG 538


>gi|330960139|gb|EGH60399.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 549

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 185/514 (35%), Positives = 266/514 (51%), Gaps = 11/514 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP    +N Y  D  L      F +   K        +      E   +AN + P   
Sbjct: 14  NQPPPLGEVNLYRIDMPLQEWSQRFGAGWAKSRIDAYGALAGGPLMEAGFLANRHKPVFA 73

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           ++   G R D VEFHPA+H L+  +I  G+    W    +P  +  AH  RAA  YL  Q
Sbjct: 74  SHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHTQ 128

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            E G     ++T AS+ AL   P + + W PK+ S  YDP N     KT   +G+ +TEK
Sbjct: 129 AEPGTGCPLTMTFASVPALRLQPDLAEIWLPKVLSTRYDPRNIGIAHKTGATLGMAMTEK 188

Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+ R 
Sbjct: 189 QGGTDVRANTTRAFAVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLARH 248

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
             + + N    QRLK+K+GN SNA+ E+EF     +++G+       + +M  +   D  
Sbjct: 249 RPNDTRNEFYIQRLKDKLGNASNASSEVEFRGALAWMIGEEGRGVPTILEMVAMTRFDCM 308

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I S + MR +L +A+H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + D
Sbjct: 309 IGSSALMRQALTQAVHHCAHRCVSGRVLTEQPLMQNVLADLALESEAALALTLRMGRALD 368

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E    R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS
Sbjct: 369 HLHD-DHEKRLVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNS 427

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGL 500
              GSGN   LDVL  L K     + LF  L    G+      I  L+ +    ++ +  
Sbjct: 428 TWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGNRHLAAHINNLKAAFQDTRDIQYR 487

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 488 ARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521


>gi|163856266|ref|YP_001630564.1| putative acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259994|emb|CAP42295.1| putative acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 555

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 179/478 (37%), Positives = 253/478 (52%), Gaps = 23/478 (4%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A  AN  +P+ H Y   G R D++EFH AWHALL   +  GLH   W R         A 
Sbjct: 60  AEQANRCSPRWHGYDRNGHRVDQIEFHAAWHALLAGIVSRGLHSHAWLRPA-----PGAQ 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKA 189
             RAA   +  Q+EAG L   ++T A++  L   P       + W P + SR+YD  +  
Sbjct: 115 VARAAAYLMQGQIEAGTLCPTTMTYAAVPLLQAEPAGVIDFGRQWLPALASRDYDSADAP 174

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIM 245
              K    IG+GLTEK+GG+D+ AI ++ + +  G     Y L+GHKWFLS P +DA ++
Sbjct: 175 LAAKRGALIGMGLTEKQGGSDLRAIATRAEPVGQGGRGAAYLLTGHKWFLSVPHADAHLV 234

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           LA  +   GCF VPR   DG  N +  +RLK+K+GNRSNA+ E+EF   +G L+G+    
Sbjct: 235 LANTDAGPGCFFVPRWTPDGPRNAVRIRRLKDKLGNRSNASGEVEFEQAWGMLMGEPGRG 294

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  M     LD  + S + +R ++ +A H+A+ R   G  L  QP+M++ +AD+AL+
Sbjct: 295 LPLLLQMAATTRLDCVLGSAALLRQAVVQAAHHAQHRQAFGRALASQPLMRQVLADLALE 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             AA A + RLA + DE   R + AA A  R+  P  K W CK A A IAE ME  GG+G
Sbjct: 355 SEAAMAWALRLARAVDE---RHQPAARALVRVGTPAAKLWVCKRAIAAIAECMEVWGGNG 411

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS----- 478
           Y+EE  + R YRE+P NSI  GSG+ M LDVL  L++  +  + L   L+   G+     
Sbjct: 412 YVEESPLPRLYREAPVNSIWEGSGSIMALDVLRALQRDPDCLQALHDELDPARGAWPAYD 471

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
              +    L    +  + D   AR L   +A    AA L R     +AD F+ +R  D
Sbjct: 472 QAWQAWRELAARQAGSEADPAQARRLAAGLARLWQAALLIRHAPAAVADAFVASRLAD 529


>gi|113866265|ref|YP_724754.1| Acyl-CoA dehydrogenase, short-chain specific ( AidB protein)
           [Ralstonia eutropha H16]
 gi|113525041|emb|CAJ91386.1| Acyl-CoA dehydrogenase, short-chain specific (probable AidB
           protein) [Ralstonia eutropha H16]
          Length = 587

 Score =  299 bits (766), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 177/524 (33%), Positives = 278/524 (53%), Gaps = 22/524 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N +++D  L   +       H   L   G  +     Q+ A  AN +TP+
Sbjct: 44  FNQVPDLAHYNLFATDPALRGALERLGGGWHAGTLGQFGARLGEPEVQQWAADANRHTPE 103

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D V+FHP+WHALL       L    + +      R  A   R A  +L 
Sbjct: 104 LHTHSRTGERIDAVDFHPSWHALLALLRSQQLQALPFAQP-----RAGAWVARTAGYFLQ 158

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L  P++T AS+  L     +  +  P++++ E+D  +     K+++ IG+G+T
Sbjct: 159 AQVESGSLCPPTMTFASIPVLRKETALFAELEPRLYATEHDARDLPWRSKSAIMIGMGMT 218

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ A T+  + +        Y L+GHKWF S+PM DA +++A++   +G + CF
Sbjct: 219 EKQGGSDVRANTTVARAVRGEGRGAEYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 278

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSN++ E+EF +  G L+G+       + +M    
Sbjct: 279 FVPRFRDDGSKNAVLIQRLKDKLGNRSNSSSEVEFRDATGILIGEEGRGIPTIIEMATST 338

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +  +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 339 RLDCVIGSAAILRAAFVQALHHARHRSAFGRLLADQPLMRNVLADLALESEAATLLMMEL 398

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++F+ A      A++ R++ P  K+W CK       EAME  GG+GY+EE  +AR YRE
Sbjct: 399 GHAFEHADDDPLAASWKRVVTPAAKFWVCKRTLEATGEAMEVWGGNGYVEEGPMARLYRE 458

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDS 490
           +P NSI  GSGN M LDVL  +++  +   +L   L +  G           +  +LR  
Sbjct: 459 APVNSIWEGSGNIMCLDVLRAIQRNPDDAARLLQDLSRRAGGHPAVRAELASLQALLRQP 518

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             L +     AR   + + L + AA +      + A++F+ +R 
Sbjct: 519 PELLEAS---ARRFAQGLVLTAQAALMLAHADTENAELFVASRL 559


>gi|194366730|ref|YP_002029340.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349534|gb|ACF52657.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 545

 Score =  299 bits (766), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 255/459 (55%), Gaps = 14/459 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           P ++   LNQPP F G   ++ D +L+ A+           L + G    +    EL R+
Sbjct: 11  PFETHVVLNQPPPFAGRQLWTDDVALMEAVQREGAGSFAPRLAVYG----ALAGDELYRL 66

Query: 77  ---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P+L  +   G R D VEFHPA+H L+  +   G+    W    EP  +  AH
Sbjct: 67  GFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKSHGVAGLSW---HEP--QPGAH 121

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA  YL  Q EAG     ++T A++  L + P +  +WA K  +  YDP +     K
Sbjct: 122 VARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPRDVPATDK 180

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             + +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++LAQ  G +
Sbjct: 181 AGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            C L+PR L DG  N     RLK+K+G+ +NA+ E+EF     + +G+       +  M 
Sbjct: 241 TCLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++  LD  + + + MR++L++A+H+AR R   G +L++ P+M   +AD+AL+  AAT LS
Sbjct: 301 MMTRLDCMLGAAAEMRMALSQALHHARHRRTFGKLLVEHPLMANVLADLALESEAATVLS 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D A   + EAA AR+   + KYW CK A   + EA EC+GG+GY+EE  + R 
Sbjct: 361 MRIARAVDRAGVDANEAALARVGTALGKYWVCKRAAGFVNEAQECLGGAGYVEESMLPRL 420

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           YR++P NSI  GSGN   LDVL  L +     E L + L
Sbjct: 421 YRQAPLNSIWEGSGNIQCLDVLRALAREPEALEALRTEL 459


>gi|94309106|ref|YP_582316.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93352958|gb|ABF07047.1| isovaleryl CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 561

 Score =  299 bits (765), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 185/524 (35%), Positives = 279/524 (53%), Gaps = 22/524 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N + SD  L A +       H + L   G  +     Q  A  AN  TP+
Sbjct: 18  FNQVPDLAHYNLFESDPGLRAALDRLGGAWHADTLAAFGARLGDPEVQAWAADANRFTPE 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D+VEFHP+WH LL       L    + +      R      R    +L 
Sbjct: 78  LHTHSRTGERIDQVEFHPSWHNLLALLRSQQLQAMPFAQP-----RPGVWAARTVGYFLQ 132

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L   ++T AS+  L   P +  D  P++++ E+D  +     KT+V IG+G+T
Sbjct: 133 AQVESGSLCPTTMTLASIPVLRKEPALFCDLEPRLYATEHDARDLPWRGKTAVMIGMGMT 192

Query: 204 EKRGGTDIAAITSQGQKI-SDGI---YCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ A T+    +  DG    Y L+GHKWF S+PM DA +++A++   +G + CF
Sbjct: 193 EKQGGSDVRANTTVALPVRGDGRGAEYALTGHKWFFSAPMCDAHLVVARMGAADGPLSCF 252

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSN++ E+EF  T G L+G+       + +M    
Sbjct: 253 FVPRFRDDGSKNPILIQRLKDKLGNRSNSSSEVEFRGTTGILIGEEGRGIPTIIEMATNT 312

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R  L +A+H+AR R   G +L DQP+M+  +AD+ L+  AAT +   L
Sbjct: 313 RLDCVIGSAALLRAGLVQALHHARHRMAFGRLLADQPLMRNVLADLTLESEAATLMMMAL 372

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++F+ A      AA+ R+M P  K+W CK A     E ME  GG+GY+E+  +AR YRE
Sbjct: 373 AHAFEHADDDPLAAAWKRVMTPAAKFWICKRALEATGETMEVWGGNGYVEDGPMARLYRE 432

Query: 437 SPANSILLGSGNAMVLDVLNLLEK----GTNLFEQL--FSTLEQDLGSSGKKVITILRDS 490
           +P NSI  GSGN M LDVL  L++    G  + + L   S  +  + +    +  +LR  
Sbjct: 433 APVNSIWEGSGNIMCLDVLRALQRDPGDGARILQDLARLSNGDAAVRAELASLQAMLRGP 492

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               ++ +  AR   + + L + AA +   G  + A +F+ +R 
Sbjct: 493 ---AEQLETSARRFAQGLVLTAQAALMIAHGNAESAALFVASRL 533


>gi|284046722|ref|YP_003397062.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950943|gb|ADB53687.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 550

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 188/524 (35%), Positives = 281/524 (53%), Gaps = 20/524 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G++ ++++  LV AL          +  ++GE +    A      AN N P+L
Sbjct: 17  NQPPPLEGIDLFTTNRPLVEALEREGGGWARADAVMVGE-IAGGDAIRWGFEANENPPRL 75

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+VEFHP+WH L++ S+   +H   W        R  AH  R A     +
Sbjct: 76  KTHDRFGNRVDQVEFHPSWHRLMQTSVEHAIHALPWREE-----RAGAHAARTALSLTFS 130

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAGH    ++T A++ AL   P +   W  ++ S  YD  +    +KT    G+G+TE
Sbjct: 131 QVEAGHGCPITMTFAAVPALRAQPELLDVWEERLTSARYDSRDVPAAEKTGALCGMGMTE 190

Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVP 259
           K+GG+D+ A T+  + +  G     Y L+GHKWF S+PM D F++LAQ+EG  V CF VP
Sbjct: 191 KQGGSDVRANTTVARAVGGGGPGGEYALTGHKWFCSAPMCDLFLVLAQIEGEGVSCFAVP 250

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N    QRLK+K+GNRSNA+ E+EF+  +G L+G+       + +M     LD
Sbjct: 251 RWRPDGTRNAFHLQRLKDKLGNRSNASSEVEFAGAYGQLVGEPGRGVATIIEMVNHTRLD 310

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S +GMR + A A H+A  R   G +LI+QP+M   +AD+ ++  AAT  + RLA +
Sbjct: 311 CVIGSAAGMRWATALATHHAAHRSAFGRLLIEQPLMANVLADLCVESEAATIAAMRLARA 370

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +DE     ++  + RI   + KYW CK      AEA+E +GG+GY+EE  + R YRE+P 
Sbjct: 371 YDE-----QDHPFKRIATAVMKYWVCKRNAQHAAEAIEVLGGNGYVEESGMPRLYREAPL 425

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN M LDVL  L +     +   + L    G+  +    +  LRD ++   + 
Sbjct: 426 NSIWEGSGNVMCLDVLRALHREEGTRDAFLAELALAGGADPRLDAHVARLRDELADPTDA 485

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHS 540
           +  AR L E +ALA   + + R     +A+ F   R   D+ H+
Sbjct: 486 ELRARRLVEAMALALQGSLVVRHAPPAVAEAFCAARLAGDHGHA 529


>gi|238797598|ref|ZP_04641095.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC
           43969]
 gi|238718595|gb|EEQ10414.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC
           43969]
          Length = 548

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN N 
Sbjct: 11  LVFNQPEPLSNSNLFLSDMALREAVVREHAGWDGEALSLMGLQLGSQESLELGRLANNNP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  +   +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDAAGQRLDQVRFHPAWYVLMQELVKHRVHNLPWQED----ARIGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + K+W P + S  YD       QK  + IG+
Sbjct: 127 LHAQVEAGSLCPITMTFGAIPLLQQTLPPLFKNWLPPLLSDRYDSHQTVGSQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++    G + +   Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLGMRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK+K+GNRSNA+ E+EF     +LLGD       +  M    
Sbjct: 247 FLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDQATAWLLGDEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALLMRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ E  + + E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EKPNEAHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL    K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPMAIEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     AA L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 518


>gi|188590973|ref|YP_001795573.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170937867|emb|CAP62851.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 556

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/527 (33%), Positives = 281/527 (53%), Gaps = 25/527 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQ P     N + SD ++ A +       H + L   G  +     Q+ A  AN +TP+
Sbjct: 10  FNQVPDLAHYNLFDSDPMVRAALERLGGGWHADALRQFGARLGEPEVQQWAADANRHTPE 69

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH +   GER D VEFHP WHALL       L    + +      R  A   R A  +L 
Sbjct: 70  LHTHSRTGERIDMVEFHPGWHALLGLLRSQQLQALPFAQP-----RAGAWAARTAGYFLQ 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E+G L  P++T AS+  L     +  +  P++++  +D  +     K+++ IG+G+T
Sbjct: 125 AQVESGSLCPPTMTFASIPVLRKEAALFAELEPRLYATGHDARDLPWRDKSAIMIGMGMT 184

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
           EK+GG+D+ A T+  + +        Y L+GHKWF S+PM DA +++A++   +G + CF
Sbjct: 185 EKQGGSDVRANTTVARPVRGEGRGAEYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF +  G L+G+       + +M    
Sbjct: 245 FVPRFRDDGSRNAVQIQRLKDKLGNRSNASSEVEFRDAAGILIGEEGRGIPTIIEMATST 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  I S + +R +  +A+H+ R R   G +L DQP+M+  +AD+AL+  AAT L   L
Sbjct: 305 RLDCVIGSAAILRAAFVQALHHTRHRSAFGRLLCDQPLMRNVLADLALESEAATLLMMEL 364

Query: 377 ANSFDEAKSRSEE---AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++F  A+  + +   AA+ R++ P  K+W CK       EAME  GG+GY+EE  +AR 
Sbjct: 365 GHAFAHAEGDNPDPLAAAWKRVVTPAAKFWVCKRTLEATGEAMEVWGGNGYVEEGPMARL 424

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITIL 487
           YRE+P NSI  GSGN M LDVL  L++  +   +L   L +  G           +  +L
Sbjct: 425 YREAPVNSIWEGSGNIMCLDVLRALQRNPDDGARLLQDLSRRAGGHPSVRAELASLQAML 484

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           R+     ++ +  AR   + + L + AA +      + A++F+ +R 
Sbjct: 485 REP---AEQQEANARRFAQGLVLTAQAALMLAHADPENAELFVASRL 528


>gi|190575394|ref|YP_001973239.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190013316|emb|CAQ46950.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 545

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 171/454 (37%), Positives = 252/454 (55%), Gaps = 28/454 (6%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE--------LELLGEYVLSCT 69
           P ++   LNQPP F G   ++ D  L          VH+E        L + G    +  
Sbjct: 11  PFETHVVLNQPPPFAGRQLWTDDVALA-------EAVHREGAGALAPRLAVYG----ALA 59

Query: 70  AQELARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             EL R+   AN + P+L  +   G R D VEFHPA+H L+  +   G+    W    EP
Sbjct: 60  GDELYRLGFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMSAAKQHGVAGLSW---HEP 116

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +  AH  RAA  YL  Q EAG     ++T A++  L + P +  +WA K  +  YDP 
Sbjct: 117 --QPGAHVARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPR 173

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
           +     K  + +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++L
Sbjct: 174 DVPVADKNGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVL 233

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + C L+PR L DG  N     RLK+K+G+ SNA+ E+EF     + +G+     
Sbjct: 234 AQAPGGLTCLLMPRRLADGDRNAFRLMRLKDKLGDWSNASSEVEFCGAQAWRVGEEGRGV 293

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M ++  LD  + + + MR++LA+A+H+AR R   G +L++  +M   +AD+AL+ 
Sbjct: 294 ATIIGMVMMTRLDCMLGAAAEMRMALAQALHHARHRRTFGKLLVEHSLMTNVLADLALES 353

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AAT L+ R+A + D A   + EAA AR+   + KYW CK APA + EA EC+GG+GY+E
Sbjct: 354 EAATVLAMRIARAVDRAGVDANEAAMARLGTALGKYWLCKRAPAFVNEAQECLGGAGYVE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  + R YR++P NSI  GSGN   LDVL  L +
Sbjct: 414 ESMLPRLYRQAPLNSIWEGSGNIQCLDVLRALAR 447


>gi|108809892|ref|YP_653808.1| isovaleryl CoA dehydrogenase [Yersinia pestis Antiqua]
 gi|108813449|ref|YP_649216.1| isovaleryl CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|150260574|ref|ZP_01917302.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125]
 gi|161484880|ref|NP_667976.2| isovaleryl CoA dehydrogenase [Yersinia pestis KIM 10]
 gi|165926727|ref|ZP_02222559.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936433|ref|ZP_02225001.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011875|ref|ZP_02232773.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166214000|ref|ZP_02240035.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400611|ref|ZP_02306120.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419181|ref|ZP_02310934.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423560|ref|ZP_02315313.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467835|ref|ZP_02332539.1| isovaleryl CoA dehydrogenase [Yersinia pestis FV-1]
 gi|218927585|ref|YP_002345460.1| isovaleryl CoA dehydrogenase [Yersinia pestis CO92]
 gi|229840256|ref|ZP_04460415.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842334|ref|ZP_04462489.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903927|ref|ZP_04519040.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|270489085|ref|ZP_06206159.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis
           KIM D27]
 gi|294502490|ref|YP_003566552.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003]
 gi|108777097|gb|ABG19616.1| acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|108781805|gb|ABG15863.1| putative acyl-CoA dehydrogenase [Yersinia pestis Antiqua]
 gi|115346196|emb|CAL19064.1| putative acyl-CoA dehydrogenase [Yersinia pestis CO92]
 gi|149289982|gb|EDM40059.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125]
 gi|165915549|gb|EDR34158.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921350|gb|EDR38574.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989234|gb|EDR41535.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204795|gb|EDR49275.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963175|gb|EDR59196.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049979|gb|EDR61387.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057730|gb|EDR67476.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229679697|gb|EEO75800.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|229690644|gb|EEO82698.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696622|gb|EEO86669.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|262360521|gb|ACY57242.1| putative acyl-CoA dehydrogenase [Yersinia pestis D106004]
 gi|262364468|gb|ACY61025.1| putative acyl-CoA dehydrogenase [Yersinia pestis D182038]
 gi|270337589|gb|EFA48366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis
           KIM D27]
 gi|294352949|gb|ADE63290.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003]
 gi|320013750|gb|ADV97321.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 547

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 276/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 11  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N + ++RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 247 FLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518


>gi|21957352|gb|AAM84227.1|AE013666_7 putative acyl coenzyme A dehydrogenase [Yersinia pestis KIM 10]
          Length = 557

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 276/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 21  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 80

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 81  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 136

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 137 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 196

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 256

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N + ++RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 257 FLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 316

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 317 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 376

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 377 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 435

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 495

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 496 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 528


>gi|264680924|ref|YP_003280834.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262211440|gb|ACY35538.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 549

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/526 (35%), Positives = 284/526 (53%), Gaps = 28/526 (5%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNTPQ 83
           NQ P     N Y+SD +L  A+          EL+  G EY    T +  A  AN+  P+
Sbjct: 8   NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLR-AAEEANHFEPE 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141
           LH + P G+R D+V FHPAWH ++  +  +G+       S  P    R  A     A L+
Sbjct: 67  LHTHSPSGDRIDQVRFHPAWHQMMAIARRNGI-------SNLPFTDQRPTAWAAYGASLF 119

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + +Q+E+G     ++T AS+  +   P+++    P + S +YD  +     K S+ +G+G
Sbjct: 120 MHSQIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMG 179

Query: 202 LTEKRGGTDIAAITSQGQKI----SDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
           +TE++GG+D+ + T++   +    S G     Y ++GHKWF S+PM D  ++LA+ E R 
Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             CF VPR   DGS N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M
Sbjct: 240 PTCFFVPRWRPDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L
Sbjct: 300 ATYTRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  LA  F    +  +  A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R
Sbjct: 360 AMDLAARFGSEDALDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRD 489
            +RE+P NSI  GSGN M LDVL  + +  +    L   L +++GS     +  +  LR+
Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHL-REVGSEDAVLRAQVDKLRE 476

Query: 490 SISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +++L  +D +  AR  T+++A    A  + +   +D A  F+ +RF
Sbjct: 477 AVTLPPQDLEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRF 522


>gi|50083701|ref|YP_045211.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1]
 gi|49529677|emb|CAG67389.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1]
          Length = 548

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 280/533 (52%), Gaps = 46/533 (8%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ       N Y SD  L  ++  +     K+L   GE +    +  LA  AN + PQLH
Sbjct: 11  NQFNELCNYNLYQSDVPLQEILKRYGHHEQKQLTTFGEILGHQRSYMLADQANRHLPQLH 70

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK---IRAARLYL 142
            +   G R D+VEFHPAWH  +R++    LH         P +   A       AAR YL
Sbjct: 71  GFDARGRRIDEVEFHPAWHQWMRQNREYALHA-------HPFITSAAQTGWVEWAARFYL 123

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
             Q+E+G L   ++T  S+  +    ++ +    K+ S +YD  +    QK+S+ +G+G+
Sbjct: 124 SGQVESGSLCPSAMTLGSIPLIQRESKLWQTLGKKLLSCDYDERDILISQKSSIWVGMGM 183

Query: 203 TEKRGGTDIAA---------ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGR 252
           TEK+GG+D+ A         I+ +G++     Y L+GHKWF S+PMSDA +++AQ  +  
Sbjct: 184 TEKQGGSDVRANQTFAKPVGISGRGEE-----YLLTGHKWFFSAPMSDAHLVVAQTSQEE 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L +GS N +  Q+LKNK+GN+SN++ E+EF +  G ++G+       + +M
Sbjct: 239 LACFFVPRWLSNGSKNHIEIQQLKNKVGNKSNSSSEVEFRDALGIMIGEEGRGIPTIIEM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  ++ S + +R +L + I Y R+R   G +L DQP+M+  + D+AL+  AA  L
Sbjct: 299 ATYTRLTCSVGSTAILRQALVQCIAYTRQRRAFGRVLADQPLMQAVLTDMALETEAALHL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S  LA  +      S+  A+ R++ P  K+W CK A  +  EAME  GG+GY+E   ++R
Sbjct: 359 SMHLAACYQRDDDISQ--AWVRLLTPAAKFWICKRAVELTGEAMEVFGGNGYVETGIMSR 416

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF----------STLEQDLGSSGKK 482
            ++E+P NSI  GSGN M LDVL  +++     + LF          S L QDL +    
Sbjct: 417 LFKEAPVNSIWEGSGNIMCLDVLRAIQRHPESIQVLFDSFGDVTAQESCLYQDLQA---- 472

Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
               L+D +    E     AR    ++ L + A  + R   + ++D F+++R+
Sbjct: 473 ----LKDELQYSSEQLQFSARHFVSRLVLLTQAVLMRRYAPHWVSDAFIQSRY 521


>gi|262369998|ref|ZP_06063325.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262315037|gb|EEY96077.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 550

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 175/519 (33%), Positives = 281/519 (54%), Gaps = 36/519 (6%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           N + +D++L  ++  + S     L  +G+ V S    + A +AN +TP LHA+   G R 
Sbjct: 21  NLFETDTVLQEILTRYGSQDQPRLTEMGKVVGSAEYYDYADLANRHTPILHAFDARGRRK 80

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-------AARLYLMAQLE 147
           + +EFHPAWH  +      GL     +R F+       H          AAR YL  Q+E
Sbjct: 81  NFIEFHPAWHKWM------GL-----NRQFDTHAHPFNHPNSTSKWVEWAARFYLAGQVE 129

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G+L   S+T  S+  +   P +      K+ S EYD  +    QK S+ +G+G+TEK+G
Sbjct: 130 CGNLCPNSMTLGSIPLIQREPELWAKIGDKLLSTEYDERDVPISQKKSIWLGMGMTEKQG 189

Query: 208 GTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLL 262
           G+D+ A  +    +++      Y L+GHKWF S+PM DA +++A+ E   + CF VPR L
Sbjct: 190 GSDVRANETIAVPVAEAGRGQAYLLTGHKWFFSAPMCDAHLVVAKTEQDGLACFFVPRWL 249

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           E+G+ N +  QRLK+K+GNRSN++ E+EF   +G ++G+       + +M     L  ++
Sbjct: 250 ENGTKNPIHIQRLKDKVGNRSNSSSEVEFKEAWGIMIGEAGRGIPTIIEMANYTRLTCSV 309

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S +  R +L + I Y R+R   G  L +QP+M+  +AD+AL+  AA  LSF LA+ ++ 
Sbjct: 310 GSTAMFRQALVQCIAYTRQRKAFGKHLAEQPLMRAVLADLALETEAAMQLSFHLAHCYET 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S   A+ RIM P +K+W CK A  +  E ME  GG+GY++   +AR ++E+P N+I
Sbjct: 370 DDALS--VAWKRIMTPASKFWICKRAVELTGEMMEIFGGNGYVDNGIMARIFKEAPVNTI 427

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK------- 495
             GSGN M LDVL  + +     E LF    QDL ++  +   + ++  SL +       
Sbjct: 428 WEGSGNVMCLDVLRAISRDVESIEILF----QDLATTAMQDEQLKQELKSLFQLFQQTPE 483

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           E + + R L  ++ + + A  L R   N +AD F+++R+
Sbjct: 484 ELQFMGRSLVSRLVILAQAVLLKRHAPNYVADGFIQSRY 522


>gi|238783563|ref|ZP_04627585.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC
           43970]
 gi|238715618|gb|EEQ07608.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC
           43970]
          Length = 548

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 182/516 (35%), Positives = 276/516 (53%), Gaps = 17/516 (3%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        ++L L+G  + S  + EL R+AN N 
Sbjct: 11  LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDREDLSLIGLQLGSQESLELGRLANSNP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  I    H   W        R  +   RAAR  
Sbjct: 71  PELLRYDAVGQRLDQVRFHPAWYVLMQELIKHRAHNLPWQED----ARIGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  + P +  +W P + S  YDP      QK  + IG+
Sbjct: 127 LHAQVEAGSLCPITMTFGAIPLLQQSLPPLFHNWLPPLLSDRYDPHQVVGSQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLEARGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +LLGD       +  M    
Sbjct: 247 FLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDHATAWLLGDEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALLMRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ E    + E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EKPHEAHEQIFSRLLTPAAKYRICGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            P NSI  GSGN M LDVL  L K     ++ +Q F  +         +    L+  +  
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPAAIDMLQQEFYPVRGQ-NRLFDRAWRQLQQRLKT 484

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
            KE++G  R LT+++     AA L R     +AD +
Sbjct: 485 PKEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 518


>gi|162421077|ref|YP_001605267.1| isovaleryl CoA dehydrogenase [Yersinia pestis Angola]
 gi|162353892|gb|ABX87840.1| acyl-CoA dehydrogenase family protein [Yersinia pestis Angola]
          Length = 547

 Score =  296 bits (758), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 11  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGNTALLLRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518


>gi|45435248|gb|AAS60808.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 557

 Score =  296 bits (758), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 21  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 80

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 81  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 136

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 137 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 196

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 256

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 257 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 316

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 317 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 376

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 377 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 435

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 495

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 496 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 528


>gi|308451696|ref|XP_003088765.1| hypothetical protein CRE_23827 [Caenorhabditis remanei]
 gi|308245410|gb|EFO89362.1| hypothetical protein CRE_23827 [Caenorhabditis remanei]
          Length = 552

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 175/523 (33%), Positives = 276/523 (52%), Gaps = 25/523 (4%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ       N  ++D +L  ++  + S   + L    +   S    E A +AN +TP+LH
Sbjct: 14  NQFDELQNYNLLTTDQVLQEILQRYGSQDQQRLTEFSQIAGSTEYYEYADLANRHTPELH 73

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           ++   G R D +EFHPAWH  +R +     H       F            AAR +L  Q
Sbjct: 74  SFDARGRRKDFLEFHPAWHKWMRLNRQFDTHA----HPFNHPQSSSKWVDWAARFFLSGQ 129

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E G+L   S+T  S+  +   P +      K+ S EYD  +    QK S+ +G+G+TEK
Sbjct: 130 VECGNLCPNSMTLGSIPLIQNEPELWAKVGEKLLSTEYDERDIPISQKKSIWLGMGMTEK 189

Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPR 260
           +GG+D+ A  ++   +++      Y L+GHKWF S+PM DA +++A+ E   + CF VPR
Sbjct: 190 QGGSDVRANETRAVPVAESGRGQAYLLTGHKWFFSAPMCDAHLVVAKTEQDGLACFFVPR 249

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            LEDG+ N +  QRLK+K+GNRSN++ E+EF N +G ++G+       + +M     L  
Sbjct: 250 WLEDGTKNPVQVQRLKDKVGNRSNSSSEVEFKNAWGIMIGEAGRGIPTIIEMANYTRLTC 309

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           ++ S + +R +L + I Y R+R   G  L +QP+M+  +AD+AL+  AA  LSF LA+ +
Sbjct: 310 SVGSSAMLRQALVQCIAYTRQRKAFGKHLAEQPLMQAVLADLALETEAAMQLSFHLAHCY 369

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +     S   A+ RIM P  K+W CK    +  E ME  GG+GY++   +AR ++E+P N
Sbjct: 370 ESDDELS--LAWRRIMTPAAKFWVCKRTVELTGEMMEVFGGNGYVDTGIMARIFKEAPVN 427

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKG 499
           +I  GSGN M LDVL  +++     E LF +  Q          +IL+D + +L K   G
Sbjct: 428 TIWEGSGNVMCLDVLRAIQRDRESIEVLFKSFAQVASQD-----SILQDELQALFKLFSG 482

Query: 500 L--------ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           L        AR L  ++ + + A  L +   + +AD F+  R+
Sbjct: 483 LQADELQFMARSLVSRLVILAQAILLKQHAPDFVADAFIATRY 525


>gi|145600839|ref|YP_001164915.1| isovaleryl CoA dehydrogenase [Yersinia pestis Pestoides F]
 gi|161511444|ref|NP_991931.2| isovaleryl CoA dehydrogenase [Yersinia pestis biovar Microtus str.
           91001]
 gi|229836644|ref|ZP_04456810.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A]
 gi|145212535|gb|ABP41942.1| acyl-CoA dehydrogenase [Yersinia pestis Pestoides F]
 gi|229706328|gb|EEO92336.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A]
          Length = 547

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 11  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518


>gi|134294247|ref|YP_001117982.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134137404|gb|ABO53147.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 550

 Score =  296 bits (757), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 272/487 (55%), Gaps = 16/487 (3%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           +L+  G  + S     LA  AN +TP+L+A+   G R D+VEFHPAWH LL    ++GL 
Sbjct: 42  QLDAYGARLGSADTARLADEANRHTPELNAFDRRGRRIDRVEFHPAWHTLLGMYRNEGL- 100

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            S+  R      R+      AA  YL  Q+EAG L   ++T A++  L   P +      
Sbjct: 101 VSLAFRD----TRRGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPLLQKEPALWALLRD 156

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHK 232
           K++S +YDP +     K S+  G+G+TEK+GG+D+ A     T+ G     G Y L GHK
Sbjct: 157 KLYSDDYDPRDVPLAGKRSIWFGMGMTEKQGGSDVRANTTLATASGAGGRGGEYRLRGHK 216

Query: 233 WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           WF S+PM DA +++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E 
Sbjct: 217 WFFSAPMCDAHLVVARTEAGGPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIEL 276

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           ++ +G +LGD       + +M     L+  + S + +R  + +AI Y R+RH  G  L +
Sbjct: 277 NDAWGIMLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAE 336

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           QP+M+  +AD+AL+  AA  L+ R+A++F E      E A+ RI+ P  K+W CK A  +
Sbjct: 337 QPLMRTVLADLALESEAALVLAMRIADAF-ELDDSPRERAWKRIVTPAAKFWVCKRAVEL 395

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             E ME  GG+GY+++  IAR +RE+P NSI  GSGN M LDVL  + +  +    L + 
Sbjct: 396 TGEVMEVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAE 455

Query: 472 LEQDLGSSGKKV---ITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIAD 527
           L + LG+   ++   + +LR  ++   +  +  AR   +++AL + A  L R     +AD
Sbjct: 456 LTE-LGAGEPRIRAALDVLRAMLAAPADALEASARLFAQRLALVAQACLLTRDAPAAVAD 514

Query: 528 VFLENRF 534
            F+  R 
Sbjct: 515 AFIATRL 521


>gi|254520907|ref|ZP_05132962.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14]
 gi|219718498|gb|EED37023.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14]
          Length = 545

 Score =  295 bits (756), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 169/447 (37%), Positives = 251/447 (56%), Gaps = 14/447 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           P ++   LNQPP F G + ++ D +L+ A+           L + G    +    EL R+
Sbjct: 11  PFETHVVLNQPPPFAGRHLWTDDVALMEAVQREGAGGFAPRLAVYG----ALAGDELYRL 66

Query: 77  ---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P+L  +   G R D VEFHPA+H L+  +   G+    W    EP  +  AH
Sbjct: 67  GFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKRHGVAGLSW---HEP--QPGAH 121

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA  YL  Q EAG     ++T A++  L   P +  +W+ K  +  YDP +     K
Sbjct: 122 VARAALSYLHHQAEAGTSCPLTMTHAAVAVLSPHPHL-AEWSRKAAAPVYDPRDVPVADK 180

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             + +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++LAQ  G +
Sbjct: 181 AGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            C L+PR L DG  N     RLK+K+G+ +NA+ E+EF     + +G+       +  M 
Sbjct: 241 TCLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++  LD  + + + MR++LA+A+H+AR R   G +L+D P+M   +AD+AL+  AAT LS
Sbjct: 301 MMTRLDCMLGAAAEMRMALAQALHHARHRRTFGTLLVDHPLMANVLADLALESEAATVLS 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D A     EAA AR+   + KYW CK A A + EA EC+GG+GY+EE  + R 
Sbjct: 361 MRIARAVDRAGVDGNEAALARLGTALGKYWVCKRAAAFVNEAQECLGGAGYVEESMLPRL 420

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           YR++P NSI  GSGN   LDVL  L +
Sbjct: 421 YRQAPLNSIWEGSGNIQCLDVLRALAR 447


>gi|320168853|gb|EFW45752.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 631

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 277/572 (48%), Gaps = 63/572 (11%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP     N +S D  LV  +    +      LE  G  + S    +L   AN   P L
Sbjct: 28  NQPPPLADYNVFSQDRALVETVKRHGAGWEAAGLERFGAVIGSKRVIDLGHTANRFPPIL 87

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ----AHKIRAARL 140
             +   G R D+VEFHP++H L+   I  G+    W+         +    AH  RAA L
Sbjct: 88  KTHDRYGNRIDEVEFHPSYHELMSIGIGAGVASFAWNAIAAAPAGTKSVRGAHVARAAYL 147

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ-------- 192
           YLM+Q E G     S+T A +  +   P++ + W P + SREYD   +A           
Sbjct: 148 YLMSQAEYGVCCPMSMTYAGVPVIRKLPKLAELWEPLLLSREYDSRFQAAAIASASASAA 207

Query: 193 --------KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSP 238
                   K    IG+ +TEK+GG+D+ A T+  + ++         Y L GHKWF S+P
Sbjct: 208 AAGSSNQGKRGATIGMAMTEKQGGSDVRANTTIARPVNPSQTGPGSEYLLWGHKWFCSAP 267

Query: 239 MSDAFIMLAQVE-----------------------GRVGCFLVPRLLEDGSPNGLCYQRL 275
           MSD F+ LA +                        G + CF VPR   DG+ N L   RL
Sbjct: 268 MSDGFLTLAYIPRETDPATATSAAASSAAGKSAAAGAMSCFFVPRFRPDGTKNNLTVMRL 327

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           K+K+GN++NA+ E+E+ NT+  L+ +       + +M     LD +I   + MR+ LA A
Sbjct: 328 KDKLGNKANASSEIEYHNTWAVLVSEPGRGVPTIIEMVNHTRLDCSIGGAAIMRIGLAHA 387

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +H+   R   G  L+DQP+MK  +AD+A++  AATA++FR+A SFD      +E+ +ARI
Sbjct: 388 LHHVTYRSAFGNRLLDQPLMKSVLADLAIEAEAATAMAFRIAESFDMGSGSKQESLFARI 447

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             PITKYW CK  P  + EAMEC GG+GY E+  +AR YRE+P N+I  GSGN + LDVL
Sbjct: 448 ATPITKYWICKRTPNHVYEAMECHGGNGYTEDFVLARAYREAPLNAIWEGSGNVIALDVL 507

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA-------------R 502
             ++      +     ++ D       +   ++D  +     + L+             R
Sbjct: 508 RAMQTAPEAIQAFLQEIKTDTSGKNADLDQAVQDLEAQIANQQKLSRDGNAQQAMEANGR 567

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            L + +AL    + L R    ++ADVF  NR 
Sbjct: 568 NLVDLMALTLQGSLLVRHAPQEVADVFCRNRL 599


>gi|153947947|ref|YP_001402597.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 31758]
 gi|170026003|ref|YP_001722508.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis YPIII]
 gi|152959442|gb|ABS46903.1| acyl-CoA dehydrogenase family protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|169752537|gb|ACA70055.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis
           YPIII]
          Length = 547

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 11  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S       Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLGD       +  M    
Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518


>gi|296394926|ref|YP_003659810.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296182073|gb|ADG98979.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 544

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/526 (33%), Positives = 281/526 (53%), Gaps = 14/526 (2%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ H         NQ P   G +     +L  AL          E++ LGE   S  AQ
Sbjct: 1   MNQTHT------VFNQVPPLTGWSLAEHPALAEALQRENAQAALPEIQTLGELAGSAEAQ 54

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +   +A  + PQL  +   G R D+V + P++H L+R ++  G+H + W    +P  R  
Sbjct: 55  QWGDLAEAHPPQLKTHDRYGNRIDEVVYDPSYHQLMRTAVEHGVHAAAW---ADP--RPF 109

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AH  RAA++ +  Q + GH+   ++T A + AL    ++  +  P + +REY+P  +   
Sbjct: 110 AHLARAAKMVVWGQTDPGHICPITMTYAVVPALRANEKLSAEHEPLLTNREYEPGLRPMS 169

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K  +  G+ +TEK+GG+D+ A T+      DG Y ++GHKWF S+PMSD F+ LAQ  G
Sbjct: 170 LKRGLIAGMSMTEKQGGSDVRANTTTAVAQQDGSYRITGHKWFTSAPMSDFFLTLAQTPG 229

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR+L DG+ N    QRLK+K+GNRSNA+ E+E+ +   +L+GD       + +
Sbjct: 230 GLSCFFVPRVLPDGTRNNFFLQRLKDKLGNRSNASSEVEYDDATAWLVGDEGKGVKTIVE 289

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  LD A+ + +GM V++A+A H+A+ R   G  L DQP+M+  +AD+A++  A+  
Sbjct: 290 MVNVTRLDCALGTSTGMSVAVAQAAHHAKHRSAFGARLADQPLMRNVLADLAVEAEASLT 349

Query: 372 LSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               LA+  D++ +   +A    RI   ++KY+ CK  P    EA+EC+GG+GY+EE  +
Sbjct: 350 TGLWLASLLDKSVAGDGQAKTLLRISLAVSKYFICKRGPVHAGEALECLGGNGYVEESRM 409

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
            R YRE+P  S+  GSGN   LD L  + K        F+ L++  G+  +    +  L+
Sbjct: 410 PRIYREAPLLSVWEGSGNVAALDALRAIAKQPESLAVFFAELDKARGADARLDAAVDSLK 469

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                 +  +  AR +   +ALA   + L R G   +AD F  +R 
Sbjct: 470 GQFGDFETIEHRARLIVGSMALALQGSLLVRYGHPAVADAFTASRL 515


>gi|238795293|ref|ZP_04638872.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC
           29909]
 gi|238725378|gb|EEQ16953.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC
           29909]
          Length = 547

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/515 (34%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN N 
Sbjct: 11  LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGETLSLIGLQLGSSESLELGRLANTNP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  ++  LH   W        R  +   RAAR  
Sbjct: 71  PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRLHNLPWQED----ARIGSFAARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+E+G L   ++T  ++  L  T P + ++W   + S  +DP      QK  + IG+
Sbjct: 127 LHAQVESGSLCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRFDPHQSIGSQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +    +   Y L GHKWF S P SDA ++LAQ +G + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLEGRGNGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DGS N +  +RLK+K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 247 FLPKILPDGSYNAIRLERLKDKLGNRSNASSEVEFDNATAWLLGDEGDGVRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALLMRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+++ E    + E  ++R++ P  KY  C      +AEAME +GG GY E+  + R YRE
Sbjct: 367 ASAW-EKSDEAHEQIFSRLLTPAAKYRVCGQGSGFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL    K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPAAIEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     + D +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPPLVDAW 518


>gi|299530916|ref|ZP_07044330.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721137|gb|EFI62080.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 549

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/526 (34%), Positives = 284/526 (53%), Gaps = 28/526 (5%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNTPQ 83
           NQ P     N Y+SD +L  A+          EL+  G EY    T +  A  AN+  P+
Sbjct: 8   NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLR-AAEEANHFEPE 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141
           LH + P G+R D+V FHPAWH ++  +  +G+       S  P    R  A     A L+
Sbjct: 67  LHTHSPSGDRIDQVRFHPAWHQMMTIARLNGI-------SNLPFTDQRPTAWAAYGASLF 119

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + +Q+E+G     ++T AS+  +   P+++    P + S +YD  +     K S+ +G+G
Sbjct: 120 MHSQIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMG 179

Query: 202 LTEKRGGTDIAAITSQGQKI----SDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
           +TE++GG+D+ + T++   +    S G     Y ++GHKWF S+PM D  ++LA+ E R 
Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             CF VPR   DGS N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M
Sbjct: 240 PTCFFVPRWRSDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L
Sbjct: 300 ATYTRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  LA  F    +  +  A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R
Sbjct: 360 AMDLAARFGSEDALDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRD 489
            +RE+P NSI  GSGN M LDVL  + +  +    L   L +++GS     +  +  LR+
Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHL-REVGSEEAVLRAQVDKLRE 476

Query: 490 SISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +++L  ++ +  AR  T+++A    A  + +   +D A  F+ +RF
Sbjct: 477 AVTLPPQELEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRF 522


>gi|171315814|ref|ZP_02905045.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171099003|gb|EDT43788.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 550

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/518 (35%), Positives = 276/518 (53%), Gaps = 15/518 (2%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL           L+  G  + S     LA  AN +TP+L
Sbjct: 10  NQFDELVDYNLFATDIALRDALARAGADWAVPRLDAYGARLGSADTARLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHPAWH LL    ++G   S+  R   P          AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    I      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATAIGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M     L 
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y RRRH  G  L +QP+M+  +AD+AL+  AA  L+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRRRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497
           NSI  GSGN M LDVL  + +  +    L + L          +  +  LR  ++   + 
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAELAGLGAGEPRIRAALDALRAMLAAPADA 483

Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  AR   +++AL + A  L R   + +AD F+  R 
Sbjct: 484 LEASARLFAQRLALVAQACLLRRDAPSAVADAFVATRL 521


>gi|51594786|ref|YP_068977.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 32953]
 gi|186893795|ref|YP_001870907.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis PB1/+]
 gi|51588068|emb|CAH19674.1| putative acyl-CoA dehydrogenase [Yersinia pseudotuberculosis IP
           32953]
 gi|186696821|gb|ACC87450.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 547

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L L+G  + S  + EL R+AN + 
Sbjct: 11  LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + IG+
Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +S       Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M    
Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYSVRGQNRLFDRAWRQLQQRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518


>gi|85712061|ref|ZP_01043114.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85694051|gb|EAQ31996.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 539

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 279/538 (51%), Gaps = 16/538 (2%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNT 81
            ALNQPP  I  N Y SD  L      F  S    E   LG  + S    E    AN+  
Sbjct: 1   MALNQPPYLINYNVYQSDRFLQQCAQYFAESNEQDERVKLGSLLGSAQHIERCYAANHYP 60

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  +   GER + + +H ++H L++ +    LH  +W RS  P     +H  R  R Y
Sbjct: 61  PELFTHDRYGERINHIAYHASYHELMQIAAEQQLHNGVW-RSVSPY----SHVERTIRYY 115

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L +QLEAGH    ++T A++  +  +P   +    ++    YD  +    +K+++ +G+G
Sbjct: 116 LNSQLEAGHGCPITMTFAAIPVIQQSPLYPQL-QEQLLQPLYDGRDIPFYEKSALTVGMG 174

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +TEK+GG+D+ + T+    QG      +Y L+GHKWFLS+PMSD F+MLAQ +  +GCF 
Sbjct: 175 MTEKQGGSDVRSNTTHATPQGATGEGEVYLLNGHKWFLSAPMSDLFLMLAQTKHGLGCFS 234

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR  EDG+ NG+  Q+LK K+GN+SNA+ E+E ++  G LLG        + DM  +  
Sbjct: 235 VPRWREDGTRNGIHIQQLKQKMGNQSNASCEVELNDVEGRLLGSEGKGVRTIIDMVAMTR 294

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D  I S + +R SL +A+H+   R   G  LI+QP+M   + D+A++   A   +  +A
Sbjct: 295 FDCMIGSSALLRQSLVQALHHCHYRSAFGARLIEQPLMINLLCDMAMESECALLWTLTVA 354

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D   S  E    AR++ P+ KYW CK AP V  EAME IGG G +E   + R YRE+
Sbjct: 355 QWLD--SSDIEAKRLARLLVPVGKYWICKRAPQVTYEAMEVIGGMGVMENTPMPRLYREA 412

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P N+I  GSGN   LDVL   EK   L    FS + +  G   +   V+  L+  +    
Sbjct: 413 PINAIWEGSGNIQCLDVLRACEKDPELLSTWFSFIARSCGQYSRYDAVVERLQQELEKYP 472

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
                AR L ++IAL + AA   +    + + +  EN  L+        L G F+ AH
Sbjct: 473 PSPFNARRLVDEIALLTQAALAIQHMQPERSRLICEN-LLNRSGRNLGTLVGDFDTAH 529


>gi|238787549|ref|ZP_04631347.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC
           33641]
 gi|238724336|gb|EEQ15978.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC
           33641]
          Length = 557

 Score =  293 bits (751), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 181/515 (35%), Positives = 273/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        ++L  +G  + S  + EL R+AN N 
Sbjct: 21  LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANTNP 80

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAAR  
Sbjct: 81  PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 136

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  S+  L  T P     W P + S  YD       +K  + IG+
Sbjct: 137 LHAQVEAGSLCPITMTFGSIPLLQQTLPSQFHSWLPSLLSDRYDSHQVVATEKRGLLIGM 196

Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +    +   Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLEVRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 256

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 257 FLPKILPDGTYNAVRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 316

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 317 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 376

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++  +     E+  ++R++ P  KY  C +  A +AEAME +GG GY E+  + R YRE
Sbjct: 377 ASAMGKTYDLQEQ-IFSRLLTPAAKYRVCGLGCAFVAEAMEVLGGIGYCEQSELPRLYRE 435

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K     + L        G +    +    L+  +   
Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTALDMLQQDFYPIRGQNRLFDRAWRQLQQRLKNP 495

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R LT+++     AA L R     +AD +
Sbjct: 496 KEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 528


>gi|197105439|ref|YP_002130816.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478859|gb|ACG78387.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 551

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 188/543 (34%), Positives = 271/543 (49%), Gaps = 13/543 (2%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQPP F G N Y  D +   A        +   L  LG  V S    +    AN   P+
Sbjct: 16  LNQPPEFAGRNLYEIDVAFREAARREAGEWLDAPLSALGAAVGSEQVLDWGEQANRFPPE 75

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+  FHPA+H L+  ++   +H   W        R   H    A L L 
Sbjct: 76  LVTFDRYGRRVDEARFHPAYHQLMALAMEHRIHDIAWTAE-----RPGGHVGHLATLALF 130

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            Q EAG +   ++T A++ AL T P V   W  K+    YD   +   QK  + +G+ +T
Sbjct: 131 TQAEAGVMCPINMTYAAVPALRTQPDVTGPWLDKLLGGRYDAPLRPIGQKAGITVGMAMT 190

Query: 204 EKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           EK+GG+D+ A T++  ++  G    Y L GHKWF S+PMSD F+ LA  E  + CFLVPR
Sbjct: 191 EKQGGSDVRANTTRAYRLETGDPRAYRLVGHKWFCSAPMSDGFLTLAYAERGLSCFLVPR 250

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +  DG  NG+   RLK+K+GN+SNA+ E+E+ + +  LLGD       + DM     L +
Sbjct: 251 ITPDGERNGIRVMRLKDKLGNKSNASSEIEYHDAYAQLLGDEGEGVKVIIDMVHHTRLGT 310

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++  MR++LA+A++    R      LIDQP M   IAD+A++  AA ALS R+A +F
Sbjct: 311 MGGTLGIMRMALAQAVNQVSGRRAFQKTLIDQPAMTSVIADLAVEYEAAAALSMRVARAF 370

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D         A+AR+   + KYW  K  P  + E MEC GG GY+EE  + R +RESP N
Sbjct: 371 DAEDPAGR--AFARLSVAVGKYWLTKRNPNFVYECMECHGGVGYVEETPMPRLFRESPLN 428

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDK 498
           +I  GSGN + LD+L  L +     E   + + +  G+  +       L D ++  +  +
Sbjct: 429 AIWEGSGNVIALDILRTLGREPLALEAYAAEVAEARGADRRLDAAAEGLLDGLARHRPGE 488

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR   E++AL    A L R     +AD F   R  D    +  +L G  + A I+D  
Sbjct: 489 ADARRTAERMALVLQGALLVRHAPAAVADAFCATRLGDEGGRSFGILPGGADVAAIVDRQ 548

Query: 559 YLD 561
             D
Sbjct: 549 RFD 551


>gi|332160031|ref|YP_004296608.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664261|gb|ADZ40905.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862085|emb|CBX72251.1| protein aidB [Yersinia enterocolitica W22703]
          Length = 543

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/515 (34%), Positives = 273/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N Y SD +L  A++        ++L  +G  + S  + EL R+AN N 
Sbjct: 7   LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 66

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAAR  
Sbjct: 67  PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 122

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + IG+
Sbjct: 123 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 182

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + +++ + ++       Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 183 GMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 242

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L D + N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 243 FLPKMLPDDTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 302

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++  +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 303 RFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 362

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AN++ E    + E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R YRE
Sbjct: 363 ANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 421

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL    K  +  E L        G +    +    L+  +   
Sbjct: 422 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQQRLKNP 481

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R +T+++     A+ L R     +AD +
Sbjct: 482 KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 514


>gi|238750080|ref|ZP_04611583.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380]
 gi|238711624|gb|EEQ03839.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380]
          Length = 551

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A++        + L  +G  + S  + EL R+AN N 
Sbjct: 15  LVFNQPEPLSNSNLFLSDMALQEAVVREHAGWDGETLAQIGLQLGSQESLELGRLANANP 74

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G R D+V FHPAW+ L++  +   +H   W        RK +   RAAR  
Sbjct: 75  PELLRYDGAGLRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARKGSFVARAARFI 130

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + + W   + S  YD       QK  + IG+
Sbjct: 131 LHAQVEAGSLCPITMTFGAIPLLQQTLPPLFQGWLSPLLSNRYDSHQIVGNQKRGLLIGM 190

Query: 201 GLTEKRGGTDIAAITSQGQKI-SDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + + S G    Y L GHKWF S P SDA ++LAQ +G + CF
Sbjct: 191 GMTEKQGGSDVLSNTTKAEPLDSRGHGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGLSCF 250

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 251 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 310

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G +L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 311 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKVLVEQPLMRQGLSRMALRLEGHTALLMRL 370

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+++ +A     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R YRE
Sbjct: 371 ASAWGKA-GEPHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 429

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL  L K  N  E L        G +    +    L+  +   
Sbjct: 430 MPVNSIWEGSGNIMCLDVLRTLRKLPNALEMLQQEFYPVRGQNRLFDRGWRQLQQRLKNP 489

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R +T+++     AA L R     +AD +
Sbjct: 490 KEEQG--RAITQQLFDLCCAAQLLRFASPPLADAW 522


>gi|91788426|ref|YP_549378.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91697651|gb|ABE44480.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 579

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 172/472 (36%), Positives = 258/472 (54%), Gaps = 37/472 (7%)

Query: 25  LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + ++  L  AL  N P++   EL  LG  + S   Q  AR+AN + P+
Sbjct: 8   FNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANIHAPE 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-----------DRSFEPVVRKQ- 131
           LH++   G R D+VEFHP++H L++ +I  GLH + W           + +  P  + + 
Sbjct: 68  LHSHDRFGRRLDQVEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAPKGKR 127

Query: 132 ----------------AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                            H +RAA   L  +LE   L   S+T A   AL +   ++ DWA
Sbjct: 128 VRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEPSVLCPISMTYAVTPALRSNAAIYADWA 187

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGI---YCLSGH 231
           P +  R YD   K    K  + +G+G+TEK+GG+D+ A T++ +   SDG    Y L+GH
Sbjct: 188 PGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGARYTLTGH 247

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           KWF S+PM DAF++LAQ    + CF +PR+L DGS N +  QRLK+K+GN++NA+ E+EF
Sbjct: 248 KWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASSEVEF 307

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                +L+G+       + +M  +  LD A+ +   MR +L+ A+++  +R   G +LID
Sbjct: 308 EGAQAWLVGEEGRGIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGKLLID 367

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           QP+M+  +AD+AL+ + A            +  + + EA  AR++ PI K+W CK     
Sbjct: 368 QPLMRNVLADLALE-SEAATALALRLARAFDRAADAHEAVMARLLTPIAKFWICKRGSHF 426

Query: 412 IAEAMECIGGSGYIEERSI---ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             EAMEC+GG+GY+EE  +   AR YRE P NSI  G+GN M LD+L  L K
Sbjct: 427 AQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRK 478


>gi|160895569|ref|YP_001561151.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361153|gb|ABX32766.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 564

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 179/498 (35%), Positives = 268/498 (53%), Gaps = 27/498 (5%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELA  AN +TP+LH +   G   D VEFHP+WH LL      GL    ++ S     R  
Sbjct: 67  ELAEQANRHTPELHRFDARGRIIDAVEFHPSWHTLLGLYRQQGLISLPFEDS--SAGRWS 124

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A    AA  YL  Q+E G L   ++T+A++  L   P + +    K+FS EYDP +    
Sbjct: 125 AW---AAGFYLHGQVEQGTLCPATMTTAAIPLLQKEPALWQQLQGKLFSHEYDPRDLPVG 181

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLA 247
            K S+ +G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A
Sbjct: 182 DKASMWLGMGMTEKQGGSDVRANTTVAMPVHAGGRGGEYLLRGHKWFFSAPMCDAHLVVA 241

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           ++   G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+EF + +G L+G+    
Sbjct: 242 RMGESGGQACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNSSSEVEFEDAWGILMGEEGRG 301

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     L+  + S + +R +  +A+ YARRR V G +L +QP+M+  +AD+AL+
Sbjct: 302 IPTIIEMATYTRLNCVLGSAAILRSATVQALAYARRRSVFGKLLAEQPLMRTVLADLALE 361

Query: 366 IAAATALSFRLANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             AA  ++ RLA +++      +  E A+ RIM P  K W CK    +  EAME +GG+G
Sbjct: 362 SEAALQIAMRLAQAYERGGDEGDPLERAWKRIMTPAAKLWVCKRGVELTGEAMEVLGGNG 421

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y++   +AR +RE+P NSI  GSGN M LDVL  + +  +  + L     QDL  +    
Sbjct: 422 YVDTGVMARLFREAPVNSIWEGSGNVMCLDVLRAISREPDGAQLLL----QDLIDTAAGE 477

Query: 484 ITILRDSISLCKEDKG-------LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
             +L+ + SL +   G        AR L + + L + A  L R     +AD F+  R   
Sbjct: 478 PALLQQAQSLARRLSGPPDQLEAQARRLVQDLVLLAQACLLRRHAPPAMADGFIATRL-- 535

Query: 537 NCHSTHCMLHGRFNAAHI 554
                  M+ G F+ A +
Sbjct: 536 -GAQQGAMVAGAFDPAGL 552


>gi|123440769|ref|YP_001004761.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087730|emb|CAL10515.1| putative acyl-CoA dehydrogenase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 547

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 178/515 (34%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N Y SD +L  A++        ++L  +G  + S  + EL R+AN N 
Sbjct: 11  LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 70

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAAR  
Sbjct: 71  PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + IG+
Sbjct: 127 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + +++ + +    +   Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 187 GMTEKQGGSDVLSNSTRAEPLQFRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 247 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 307 RFDCALGSHGLMRRAFSIALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+++ +      E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R YRE
Sbjct: 367 ASAWGKT-GEVHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 425

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
            P NSI  GSGN M LDVL    K  +  E L        G +    +    L+  +   
Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQLRLKNP 485

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           KE++G  R +T+++     A+ L R     +AD +
Sbjct: 486 KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 518


>gi|115350163|ref|YP_772002.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115280151|gb|ABI85668.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 550

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 192/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL          +L+  G  + S    +LA  AN +TP+L
Sbjct: 10  NQFDELVDYNLFATDIALRDALARAGADWAVPQLDAYGARLGSADTAQLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHPAWH LL    H+G   S+  R   P          AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPAWHTLLGLYRHEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWNLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M     L 
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDVL  + +  +    L + L  DLG+   ++   +  LR  ++   +
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAEL-TDLGAGEPRIRAALDALRAMLAAPAD 482

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR   +++AL + A  L R     +AD F+  R      S+   + G F+  H +
Sbjct: 483 TLEASARLFAQRLALVAQACLLRRDAPAAVADAFVATRL---GESSWGRIAGGFD-PHAL 538

Query: 556 D 556
           D
Sbjct: 539 D 539


>gi|119898590|ref|YP_933803.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119671003|emb|CAL94916.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 547

 Score =  289 bits (740), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 174/469 (37%), Positives = 254/469 (54%), Gaps = 11/469 (2%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           EL+ +G  +       L  +AN + PQLH +   G R D+VE+HPAW AL+R    DG+H
Sbjct: 41  ELDAIGARLGHAEVLRLGDLANRHPPQLHTHDACGRRVDRVEYHPAWDALMRLLYADGVH 100

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
           CS W    EP     AH  RAA  +L  Q+EAG L   ++T A++  L   P +H   A 
Sbjct: 101 CSAWT---EPG--PGAHVARAAAFFLHGQVEAGSLCPATMTFAAIPLLRREPALHAALAA 155

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ + +YD  +     K SV +G+GLTEK+GG+D+ ++ +Q ++ + G Y L GHKWF S
Sbjct: 156 QLGALDYDGRDLPAPSKRSVTVGMGLTEKQGGSDLRSVATQARRAAGGEYLLVGHKWFYS 215

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            P  D  ++LA+ +    CF VPR   DG  N +  QRLK+K+GNRSNA+ E+EF +  G
Sbjct: 216 VPACDGHLVLARGDDGPACFFVPRWRPDGERNAVRIQRLKDKLGNRSNASGEVEFHDALG 275

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +G+       + +M     LD  + S + MR +L EA+H+AR R   G  LI QP+M+
Sbjct: 276 IPVGEPGRGIAVLIEMAAQTRLDCVLGSAALMRRALVEALHHARHRSAFGHPLIAQPLMR 335

Query: 357 RAIADIALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +AD+AL+  AAT L+  LA   D       + +   A+ R++ P  K+W CK A A  
Sbjct: 336 NVLADLALESEAATLLAIHLAACADAECAGGGTAARGRAWRRVLTPAAKFWICKRAIAFC 395

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFS 470
           AE ME  GG+GY+E+  + R  RE+P NSI  GSGN M LD+L  L  E+          
Sbjct: 396 AECMEVCGGNGYVEDGPMPRLLREAPVNSIWEGSGNVMCLDLLRALAREQDAAAALLADL 455

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
               D     +     L  +++  ++D  LAR    ++ +   AA L R
Sbjct: 456 ADAVDGDRRWRAACEELAATLNAGRDDAWLARRGASRLVVLVQAALLRR 504


>gi|94312747|ref|YP_585956.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93356599|gb|ABF10687.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 548

 Score =  289 bits (739), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 19/536 (3%)

Query: 35  NAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           N Y++D  L   +    +  H+ EL   G  + S     +A  AN+  P+LH +   G R
Sbjct: 19  NVYTTDLPLQEAVRRAGAGAHEAELTAYGARLGSAETIRMAEEANHFKPELHTFDRQGRR 78

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+VEFHP+WH ++R +    L    +    +P  R  A    AA   +  Q+EAG    
Sbjct: 79  IDRVEFHPSWHGVMRMAREQNLVAQPFA---DP--RPGAWAAYAAGFSMHGQIEAGSQCP 133

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S+T A +  L   P +    APK++SR YD  +    QK S+ +G+G+TEK+GG+D+ A
Sbjct: 134 NSMTFACIPVLQREPELFAALAPKLYSRTYDARDIPLEQKDSILVGMGMTEKQGGSDVRA 193

Query: 214 ITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            T++ + +      G Y ++GHKWF S+PM DA +++A+ E    CF VPR   DG+ N 
Sbjct: 194 NTTRAEPLRGEGRGGEYLITGHKWFFSAPMCDAHLVVARTESGPACFYVPRYRPDGTKNA 253

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +  QRLK+K+GNRSN++ E+EF   +G ++G+       + +M     L+  + S   +R
Sbjct: 254 VQIQRLKDKVGNRSNSSSEVEFRGAWGRMIGEEGRGIPTIIEMATFTRLNCVMGSTGLIR 313

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L +A+H+ R R   G  LIDQP+M+  +AD+AL+  AAT +  RL  +F  A     +
Sbjct: 314 QCLVQALHHTRHRSAFGKTLIDQPLMRNVLADMALESEAATLMMMRLTEAFALADEDPLQ 373

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            AY RI+ P  K+W  K +  +  EAME  GG+GY++E  + R YRE+P  SI  GSGN 
Sbjct: 374 RAYKRIVTPAAKFWLAKRSVELSGEAMEVFGGNGYMDEGPMGRLYRETPVISIWEGSGNV 433

Query: 450 MVLDVLNLLEKGTN----LFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARF 503
           M LD++  + +       L E L     QD  L  +   ++  LR   +  +  + LAR 
Sbjct: 434 MALDMIRAISREPQAMQALLEDLTPFCRQDARLSDAATMLVAGLR---TQGEATEWLARR 490

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
             + + L   A  L       + D F+ +RF         ML      A I+D  +
Sbjct: 491 HAQLLVLLVQARLLGEHAPAAVTDAFIASRFDAQWGRVFGMLPDGVAHAAILDRAW 546


>gi|293604433|ref|ZP_06686840.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292817310|gb|EFF76384.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 561

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/444 (37%), Positives = 246/444 (55%), Gaps = 15/444 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P+    + Y +D +L  A+          +L   G ++         + AN   P+L
Sbjct: 19  NQVPVLEDYSLYDTDPALREAVRREGGQAWDGDLAAHGAWLGRAQTLAAGQEANRCPPRL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            AY  GG R D V+FHPAW+ L+   +  GLH   W    +PV    A   RAA   +  
Sbjct: 79  VAYDRGGHRIDHVDFHPAWNLLMGGILARGLHSRAWA---QPV--PGAQVARAAAYLMQG 133

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Q+EAG L   ++T A++  L   P    D    W P ++SRE+DP +     K S  IG+
Sbjct: 134 QVEAGTLCPTTMTFAAVPLLQREPAGAVDFAGQWLPALYSREFDPADAPLTAKRSALIGM 193

Query: 201 GLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           GLTEK+GG+D+ A++++    G       Y L GHKWF S P +DA ++LAQ +  + CF
Sbjct: 194 GLTEKQGGSDLRAVSTRAAPLGASGRGNAYQLVGHKWFFSVPQADAHLVLAQTDEGLSCF 253

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR + +G  N +  +RLK+K+GNRSNA+ E+EF N +G ++G+       + +M    
Sbjct: 254 FVPRWIPEGPRNAIRVRRLKDKLGNRSNASAEVEFENAWGVMVGEPGRGLAVLLEMAATT 313

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S + +R ++ +++H+A+ R   G  LI QP+M+  +AD+AL+  AA  L+ RL
Sbjct: 314 RLDCVLGSAALLRQAVVQSLHHAQHRQAFGKPLIAQPLMRNVLADLALESEAAMVLALRL 373

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + DE ++ +   A  R+  P  K W CK A   IAE ME  GG+GY+EE  + R YRE
Sbjct: 374 ARAVDE-RADASSRALVRVGTPAAKLWICKRAINAIAECMEVWGGNGYVEEGPMPRLYRE 432

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +P NSI  GSGN M LDVL  L++
Sbjct: 433 APVNSIWEGSGNVMALDVLRALQR 456


>gi|300715049|ref|YP_003739852.1| acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661]
 gi|299060885|emb|CAX57992.1| Acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661]
          Length = 542

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/492 (36%), Positives = 266/492 (54%), Gaps = 15/492 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SDS L  A++          L  +G+ + S  + EL R+AN + P+
Sbjct: 9   FNQPLPLANSNLFLSDSPLRDAVLREGAGWDGDLLASVGQQLGSAESLELGRLANSSPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYL 142
           L  Y P GER D V FHPAWH L++    + +H   W D + E      A   RAAR  L
Sbjct: 69  LLRYDPCGERLDDVRFHPAWHLLMQGLTANRVHNLPWLDNAPE-----TAFVARAARFML 123

Query: 143 MAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            AQ+E+G L   ++T  ++  L    P    DW P + S  YD   K    K  + IG+G
Sbjct: 124 HAQVESGSLCPVTMTFGAIPLLQKHLPAAFADWLPPLLSDRYDAHIKEAPLKRGLLIGMG 183

Query: 202 LTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +TEK+GGTD+ + T++ + +    S   Y L+GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 184 MTEKQGGTDVLSNTTRAEPVASRGSGECYQLTGHKWFFSVPQSDAHLVLAQAKGGLSCFF 243

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PRLL  G  N +  +RLK K+GNRSNA+ E+EF    G+L+G+       +  M     
Sbjct: 244 LPRLLPGGEKNAVHIERLKEKLGNRSNASSEVEFLAASGWLIGEEGEGVRQILKMGGYTR 303

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D A+ S + MR + + A+++A  R V G  L+DQP+M++ +A  AL +   TA+  RLA
Sbjct: 304 FDCALGSHAMMRRAFSVALYHAHHRQVLGKNLVDQPLMRQLLASQALVLEGQTAMLMRLA 363

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++   ++ + E  ++R+  P  KY  CK     +AE+ME +GG GY EE  + R YRE 
Sbjct: 364 RAWSH-QATASETLFSRLFTPAAKYVVCKRGIGFVAESMEVLGGIGYCEESELPRIYREM 422

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKE 496
           P NSI  GSGN M LDVL +L K   + E L +  +   G + +   ++ R   ++  K 
Sbjct: 423 PVNSIWEGSGNVMCLDVLRVLSKQPGVREMLSAEFDAVKGQN-RHFDSLWRQIKLAAGKP 481

Query: 497 DKGLARFLTEKI 508
            +  AR LTE +
Sbjct: 482 QEAQARNLTEGL 493


>gi|115523234|ref|YP_780145.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115517181|gb|ABJ05165.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 563

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/507 (34%), Positives = 264/507 (52%), Gaps = 13/507 (2%)

Query: 35  NAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           N ++ D++L  A+          +L   G    S   +EL  +AN   P+L  +   G R
Sbjct: 35  NMFTQDAVLQEAVQREAAGWAEADLTSFGALTGSAGYRELGTLANRVLPELETHDRFGNR 94

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+V FHPA+H L+  +   GLH S W           AH  RAA  Y+ +Q+EAGH   
Sbjct: 95  IDQVNFHPAYHQLMAVAYQHGLHSSSWTNP-----GPGAHVARAAHFYMQSQIEAGHGCP 149

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S+T A++ AL  TP + K + PKI +R+YD  N     K ++ IG+ +TEK+GG+D+ +
Sbjct: 150 VSMTHAAIPALRATPDLAKMFEPKITARDYDMRNVPDRDKQALVIGMAMTEKQGGSDVRS 209

Query: 214 ITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +++    G +    +Y L GHK+F+S+PMSD F+ LA     + CFL+PR   DG+ N 
Sbjct: 210 NSTRAFPVGAEGEGQLYELVGHKYFVSAPMSDLFLTLAHTRNGLTCFLMPRWRPDGTKNP 269

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L   RLK K+GN SNA+ E E      +++G        + DM  +   D  I S +G R
Sbjct: 270 LQVIRLKRKMGNASNASSETELRGALAWMVGPEGKGIRTIIDMVAMTRFDCMIGSSAGQR 329

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           ++ + AIH+  +R   G  LIDQP+M+  +AD+AL+  A+  L+ R+  + D    R EE
Sbjct: 330 MATSLAIHHCAQRAAFGKQLIDQPLMQNVLADLALEAEASLTLTMRIGRALDNRGDRHEE 389

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R      KYW CK  P    EAMECIGGSG +E+    R +RESP N+I  GS N 
Sbjct: 390 -LLMRFGTAAGKYWICKRTPNHAYEAMECIGGSGVMEDSPFPRLFRESPINAIWEGSSNV 448

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEK 507
             LDVL  L K     +  F+ + +  G + K  + +  L    S   + +  +R L ++
Sbjct: 449 QCLDVLRALGKQPEGLQVFFAEVAKAKGGNAKLDRWVAELGKEFSDLADLEFRSRALVDR 508

Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534
           +ALA   A L +     ++D F  +R 
Sbjct: 509 MALALQGALLVQHAPAFVSDAFCASRL 535


>gi|83950362|ref|ZP_00959095.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83838261|gb|EAP77557.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 540

 Score =  287 bits (735), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/458 (37%), Positives = 252/458 (55%), Gaps = 19/458 (4%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           PQ   +  GG R D+V FHP++H LL   I  G     W+       R   H   AA +Y
Sbjct: 72  PQARIFDAGGRRLDEVRFHPSYHQLLEAGIGAGYAALPWEG------RPGGHATHAAMVY 125

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L +Q+E G     ++T A++ AL +   + + W PK+ SR YD   K   +K    +G+ 
Sbjct: 126 LTSQVEPGICCPMTMTYAAVPALRSDATLLRTWVPKLTSRVYDGAAKPLARKPGATMGMA 185

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TEK+GG+D+ A  ++   +++G +Y L GHKWF S+PMSD F+MLAQ  G + CFLVPR
Sbjct: 186 MTEKQGGSDVRANATR--AVAEGEMYRLRGHKWFCSAPMSDGFLMLAQAPGGLSCFLVPR 243

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            L++   NG+  QRLK+K+GN +NA+ E+E  + +G LLG+       + DM     LD+
Sbjct: 244 WLDE-RRNGIHLQRLKSKLGNHANASAEIELVDAYGHLLGEEGDGVRVILDMVHHTRLDT 302

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+     MR +L  A H+AR R V G  L DQP+M+  +AD+ALD     AL   +  +F
Sbjct: 303 ALAPAGLMRAALDHAWHWARHRQVFGRGLADQPLMRTVLADLALDWEGTLALGLHMGAAF 362

Query: 381 DEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           D    R +EA  A+AR+   + KY   K+ P V+ EAME +GG GY+E+  +   YRE+P
Sbjct: 363 D----RDDEASRAFARLGVALAKYLGNKLCPGVVYEAMEALGGMGYVEDTELPMLYREAP 418

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
            NSI  GSGN + LDVL  L+K     E L + L +  G S +     LR  +       
Sbjct: 419 LNSIWEGSGNVICLDVLRSLQKLPLAGEVLSAELSEATGQS-RAYDMALRTHMERFTRLP 477

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           D+G AR+  E +A   +A+ L R     I+D +   R 
Sbjct: 478 DEGEARWYVESLATLLTASVLIRQAPGPISDAYCATRL 515


>gi|241767839|ref|ZP_04765422.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361084|gb|EER57774.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 439

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/405 (39%), Positives = 230/405 (56%), Gaps = 15/405 (3%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L   GE +       LA  AN +TP LH++   G R D VEFHP+WHAL+      GL  
Sbjct: 43  LTAYGERLGCADTWHLAEQANRHTPVLHSFDARGRRADAVEFHPSWHALMALYRAQGLIA 102

Query: 118 SIWDRSFEPVVRKQAHKIRA--ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   P     A +  A  A  YL  Q+E G L   ++T+AS+  L   P +     
Sbjct: 103 -------HPFQSNDAGRWTAWAAGFYLHGQVEQGTLCPATMTTASIPVLQKEPALWAQLQ 155

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGH 231
             +FS +YD  +    QK S+ +G+G+TEK+GG+D+ A T+    +      G Y L GH
Sbjct: 156 TPLFSSDYDARDVPLAQKRSIWLGMGMTEKQGGSDVRANTTLATPLGAGGRGGEYLLRGH 215

Query: 232 KWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           KWF S+PM DA +++A+  EG   CF VPR   DGS N +  QRLK+K+GNRSN++ E+E
Sbjct: 216 KWFFSAPMCDAHLVVARTAEGGHACFFVPRWCPDGSKNAVHVQRLKDKVGNRSNSSSEVE 275

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           F + +G L+G+       + +M     L+  I S + +R +  +A+ YARRR   G  L 
Sbjct: 276 FEDAWGILMGEEGRGIPTIIEMAATTRLNCVIGSAAMLRQATVQALAYARRREAFGKRLA 335

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +QP+M+  +AD+AL+  AA  L+ RLA +F+   S ++  A+ R+M P  K+W CK A  
Sbjct: 336 EQPLMRTVLADLALESEAALVLAMRLAEAFERDNSPAQR-AWKRVMTPAAKFWICKRAVE 394

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  EAME +GG+GY++   +AR +RE+P NSI  GSGN M LDVL
Sbjct: 395 LTGEAMEVLGGNGYVDSSVVARLFREAPVNSIWEGSGNVMCLDVL 439


>gi|311105191|ref|YP_003978044.1| protein AidB [Achromobacter xylosoxidans A8]
 gi|310759880|gb|ADP15329.1| protein AidB [Achromobacter xylosoxidans A8]
          Length = 553

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 181/520 (34%), Positives = 267/520 (51%), Gaps = 17/520 (3%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     + Y +D +L  A+          +L   G ++      E    AN   P+L
Sbjct: 11  NQVPPLEDYSLYETDPALREAVRREGAQAWVSDLAAHGAWLGRAQTLEAGAQANRCPPRL 70

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +Y  GG R D+VEFHP+W+ L+   +  GLH   W +  EP     A   RAA   +  
Sbjct: 71  ISYDRGGHRIDRVEFHPSWNLLMGGIMARGLHSRAWAQP-EP----GAQVARAAAYVMQG 125

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Q+EAG L   ++T A++  L   P    D    W   ++SRE+D  +     K S  IG+
Sbjct: 126 QVEAGTLCPTTMTFAAVPLLQREPPGVVDFGGQWLNALYSREFDGADAPLAAKRSALIGM 185

Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           GLTEK+GG+D+ A+T++   +        Y L GHKWF S P +DA ++LAQ +  + CF
Sbjct: 186 GLTEKQGGSDLRAVTTRATPVGAAGRGRAYLLVGHKWFFSVPQADAHLVLAQTDEGLSCF 245

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VPR + DG  N +  +RLK+K+GNRSNA+ E+EF + +G ++G+       + +M    
Sbjct: 246 FVPRWIPDGPRNAVRVRRLKDKLGNRSNASAEVEFEDAWGVMVGEPGRGLTVLLEMAATT 305

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S + +R +L +++H+AR R   G  LIDQP+M+  + D+AL+  AA AL  RL
Sbjct: 306 RLDCVLGSAALLRQALVQSVHHARHRRAFGKPLIDQPLMRNVLVDLALESEAAMALGLRL 365

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + DE ++ +   A  R+  P  K W CK A A +AE ME  GG+GY+++  + R YRE
Sbjct: 366 ARAVDE-RADASARALVRVGTPAAKLWVCKRAIAAVAECMEVCGGNGYVDDGPMPRLYRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P NSI  GSGN M LDVL  L++       L     Q  G        + R    L  E
Sbjct: 425 TPVNSIWEGSGNVMALDVLRALQREAAALPALEREFGQATGQYQDFDDALTRWRALLADE 484

Query: 497 DKG--LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +    AR +   +A    AA L +     +A  F  +R 
Sbjct: 485 AQAEFQARRIAAGLARLWQAALLIQHAPAPVAQAFAASRL 524


>gi|322831165|ref|YP_004211192.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp.
           Y9602]
 gi|321166366|gb|ADW72065.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp.
           Y9602]
          Length = 543

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 175/461 (37%), Positives = 251/461 (54%), Gaps = 11/461 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD+ L   ++   +    + L  LG+ + S  + EL R+AN N P 
Sbjct: 9   FNQPKPLSNSNLFLSDTPLREAVSRQQAGWDADVLASLGQQLGSAESLELGRLANTNPPD 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   GER D V FHPAWH L++  I + +H   W        R  +   RAAR  L 
Sbjct: 69  LLRYDTTGERLDDVRFHPAWHLLMQGLIANRVHNLPWQED----ARIGSVVARAARFILH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            Q+EAG L   ++T  ++  L    P     W   + S  YDP  ++  QK  V IG+G+
Sbjct: 125 GQVEAGTLCPVTMTFGAIPLLQKYLPPEFSGWMKPLLSDRYDPHLQSGDQKKGVLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+ + T++   +    S   Y L GHKWF S P SDA ++LAQ +G + CF +
Sbjct: 185 TEKQGGSDVLSNTTRATALEGRGSGKPYHLVGHKWFFSVPQSDAHLVLAQTDGGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF N  G+LLG+       +  M      
Sbjct: 245 PRVLPDGTRNAIRIERLKDKLGNRSNASSEVEFQNATGWLLGEEGEGVRHILKMGGHTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR +L+ A+++A +R V G  LI+QP+M++ ++ +AL +   T L  RLA 
Sbjct: 305 DCALGSHAMMRRALSVALYHAFQRQVFGKPLIEQPLMRQTLSRMALLLEGQTMLLMRLAA 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D A+    E    R+M P  K+  C+     +AEAME +GG GY E+  + R YRE P
Sbjct: 365 ASD-AQDNPAEKLLCRLMTPAAKFEVCRQGMPFVAEAMEVLGGIGYCEDSELPRLYREMP 423

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
            NSI  GSGN M LDVL  L+K     E +   L Q  G +
Sbjct: 424 VNSIWEGSGNVMCLDVLRTLKKLPASAEMVQQILHQARGQN 464


>gi|260425854|ref|ZP_05779833.1| protein AidB [Citreicella sp. SE45]
 gi|260420346|gb|EEX13597.1| protein AidB [Citreicella sp. SE45]
          Length = 544

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 189/538 (35%), Positives = 279/538 (51%), Gaps = 19/538 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL---ARMANYNTP 82
           NQPP    ++    D  L   +A   +    EL     Y L+   +E+   AR AN N P
Sbjct: 17  NQPPGRGDLDLVGGDRPLQDGLAGLDAGRSAEL---AAYGLALGREEMRWAARDANRNPP 73

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  Y  GG R D++ FHPA+H  +  SI  G H   W+       +   H   AA +YL
Sbjct: 74  ELQGYDRGGRRLDELRFHPAYHLFMELSISAGYHALPWE------GQGGGHLAHAAMVYL 127

Query: 143 MAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            +Q+E GH    ++T A + A+      V + W   + SR YDP+ +   QK+   +G+ 
Sbjct: 128 ASQVEPGHCCPLTMTYAGIAAISDQHGAVAQRWCKALMSRHYDPSVRELSQKSGATLGMA 187

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTEK+GG+D+ +  +  +   D ++ L+GHKWF S+PMSD F+ LAQ    + CFLVPR 
Sbjct: 188 LTEKQGGSDVRSNATIAEPDGD-VWRLTGHKWFCSAPMSDGFLTLAQGPEGLSCFLVPRW 246

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           LE G  NG+   RLK+K+GNRSN + E+E+     + LG        + +M     LD+A
Sbjct: 247 LEGGR-NGIRIARLKDKLGNRSNGSSEIEYERALAWPLGAPGAGVRTIIEMIHHTRLDTA 305

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +     MR +LAEA H+   R      LIDQP+M+  +AD+ALD+  + AL  R+A +FD
Sbjct: 306 MAPAGLMRAALAEAHHWVSHRSAFQRRLIDQPLMRTVLADLALDLEGSLALGLRVAGAFD 365

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   + A+ARI   + KY   K+ P V+ EAME +GG+GY+E+  +   YRE+P N 
Sbjct: 366 --GTGEADRAFARIGVALAKYLSNKLCPVVVCEAMEILGGAGYVEDGPLPMLYREAPLNG 423

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGL 500
           I  GSGN + LDVL  L +     E L +       +SG+    +           ++  
Sbjct: 424 IWEGSGNVICLDVLRTLTRDPAAREVLMAEFSDASAASGRFASALSAHQTRWPGLPEEAE 483

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           AR   E+ AL  +AAAL R    +IA+ F++ R L     T   +    +A  +ID L
Sbjct: 484 ARAFVERTALLLAAAALLRTVPAEIAEAFIDTRLLSPRGRTPGAIPA-MDAGALIDRL 540


>gi|34499591|ref|NP_903806.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105442|gb|AAQ61797.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
          Length = 547

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 180/484 (37%), Positives = 261/484 (53%), Gaps = 18/484 (3%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           GE +      ELA  AN   PQL A+   G R D+V+FHP+WH LL      GL    +D
Sbjct: 47  GERLGRAETFELAAQANRFAPQLQAFDRRGRRIDRVDFHPSWHDLLALYRSQGLVSLPFD 106

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                  R        A  YL  Q+EAG L   ++T A++  L   P +      K+ SR
Sbjct: 107 SE-----RPGRWAAFLAGFYLHGQVEAGTLCPATMTQAAIPLLKREPALWAQLGDKLLSR 161

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSS 237
           E+D  +    +KT++ +G+G+TEK+GG+D+ + TS     G     G Y L GHKWF S+
Sbjct: 162 EHDARDLPAERKTAIWLGMGMTEKQGGSDVRSNTSTATPTGAGGRGGEYTLRGHKWFFSA 221

Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           PMSDA +++AQ+ +G   CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G
Sbjct: 222 PMSDAHLVVAQLRDGGPSCFYVPRWRPDGSRNAVAIQRLKDKVGNRSNASSEVEFHDAWG 281

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+       + +M     L   I S + +R  L +AI YARRR   G  L +QP+M+
Sbjct: 282 VLIGEPGRGIPTIIEMATYTRLSCVIGSAALIRQGLVQAIAYARRRVAFGKRLAEQPLMR 341

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+AL+  AA  L+ RLA  F+     ++E A+ RI+ P  K+W CK A   + E M
Sbjct: 342 GVLADLALESEAALCLAARLAEGFE-----NDEPAWKRIVTPAAKFWVCKRAVEAVGETM 396

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           E  GG+GY+++  +AR +RE+P NSI  GSGN M LDV+  L++    +++L   L    
Sbjct: 397 EVFGGNGYVDDGPMARLFREAPVNSIWEGSGNVMCLDVMRALQREPEAWQRLQQELAALA 456

Query: 477 GSSGK--KVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           G   +    +  LR   SL     +GL R   +++AL      L       +AD F+ +R
Sbjct: 457 GGDRRLSAALADLRSMASLSPPQLEGLGRRFAQQLALTVQGCLLRGRAPAAVADGFIASR 516

Query: 534 FLDN 537
             D 
Sbjct: 517 LADG 520


>gi|120608852|ref|YP_968530.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120587316|gb|ABM30756.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 555

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 180/495 (36%), Positives = 264/495 (53%), Gaps = 22/495 (4%)

Query: 58  LELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           L  LG+Y     S     LA +AN +TP LH +   G R D+VEFHPAW AL+     +G
Sbjct: 40  LPALGDYARRLGSAGTHALAELANRHTPILHRFDSRGRRADRVEFHPAWDALMALYRGEG 99

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L    +D       R       AA  YL  Q+E G L   ++T A++  L   P +    
Sbjct: 100 LVSMPFDSD-----RPGRWSAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWARL 154

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSG 230
             ++ SR +DP      +K  + +G+G+TEK+GG+D+ A T+     G     G Y L G
Sbjct: 155 GDRLHSRTHDPREAPAHEKAGIWLGMGMTEKQGGSDVRANTTVATPLGAGGRGGEYRLRG 214

Query: 231 HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           HKWF S+P SDA +++A+    G   CF VPR L+DG+ NG+  QRLK+K+GNRSNA+ E
Sbjct: 215 HKWFFSTPQSDAHLVVARTGEGGPFACFYVPRRLQDGTLNGVHVQRLKDKVGNRSNASAE 274

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           +EF + +G L+G+       + +M     L+    S + +R +  +AI YARRRH  G  
Sbjct: 275 VEFHDAWGVLMGEEGRGIPTIIEMATYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKA 334

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCC 405
           L +QP+M+  +AD+AL+  AA AL  RLA +F+   +  +   + A+ R+M P  K+W C
Sbjct: 335 LAEQPLMRTVLADLALESEAALALLMRLAEAFERDADGTATPADRAWKRVMTPAAKFWVC 394

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           K    +  EAME  GG+GY++E  +AR + E+P NSI  GSGN M LDVL  L + T   
Sbjct: 395 KRGVEMAGEAMEVFGGNGYVQEGVMARLFLEAPVNSIWEGSGNVMCLDVLRALARDTEAA 454

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLC----KEDKGLARFLTEKIALASSAAALYRAG 521
             L             ++   LR+  +L     +E +G+ R   +++ LA+ A  L R  
Sbjct: 455 HALLEEF-APAAQGEPRIGATLRELQALLALPPQELEGMGRLAAQRLVLAAQACLLRRHA 513

Query: 522 MNDIADVFLENRFLD 536
              +AD F+  R  D
Sbjct: 514 PAAVADAFIATRLGD 528


>gi|167834966|ref|ZP_02461849.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 564

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 170/519 (32%), Positives = 266/519 (51%), Gaps = 13/519 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            NQ    +G NA+  D  L ++   F          LG    +  AQ+ AR+AN  TP L
Sbjct: 25  FNQAADPVGYNAFDDDVALSSITERFAPWAAGHASRLGALAGTAQAQDAARLANLYTPVL 84

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D VEFHPAWH L+  +  + +H   W  + EP      H  RA + YL  
Sbjct: 85  KNFDRYGNRLDWVEFHPAWHQLMSWAFGNQVHSLAWTAT-EP----NGHFARAVQSYLWN 139

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E G      +  AS+      P +   W  K    +YDP      QKT   I   +TE
Sbjct: 140 QIENGVGCPTGMAYASVAGFRRYPEL-AAWKEKTLQTQYDPRRLPIEQKTHAVIAYAMTE 198

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           K+GG+D+    +      +G    IY ++GHKWF S P++D    LA+ +  V CF +PR
Sbjct: 199 KQGGSDLRETQTFAVPHENGEHGAIYLVTGHKWFCSVPVADGIYTLARTQAGVSCFFMPR 258

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K GN+SNA+ E+E+ N +  L+G+       +     L  LD 
Sbjct: 259 ILPDGTTNRIFIQRLKDKAGNKSNASSEIEYRNAWAILVGEEGRGIREILSHAHLTRLDF 318

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR +L  A+++A+ R   G  L +QP+ +  +AD+A+D  A+  ++ R++ + 
Sbjct: 319 AVGSAGLMRHALTLALNHAQTRTAFGKPLAEQPIQEAVLADLAIDAEASMLMALRVSRAT 378

Query: 381 DEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  ++  + E A ARI  P+ K+W C+ A + + EA+E  GG+G+IEE  +AR YRE+P 
Sbjct: 379 DGWEAGNAAEKALARIATPVAKFWNCRRAASFVVEALEVHGGNGFIEENPMARLYREAPL 438

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497
           N+I  G+ N M +DV+  +++     + L        G++      + +L+ ++    E 
Sbjct: 439 NAIWEGTSNMMCMDVMRAMKREPQTLDALLDDFAGLAGANRFFDAHLGVLKATLDEGAEI 498

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
           +G AR +   +ALA   A L R    ++AD F  +R  D
Sbjct: 499 EGNARRIASLMALALQGAELLRHSTAEVADAFCASRLHD 537


>gi|289675783|ref|ZP_06496673.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 384

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/382 (40%), Positives = 216/382 (56%), Gaps = 10/382 (2%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D VEFHPA+H L+  +I  G+    W        +  AH  RAA  YL  Q + G     
Sbjct: 2   DLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHTQADPGSGCPL 56

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TEK+GGTD+ A 
Sbjct: 57  TMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTEKQGGTDVRAN 116

Query: 215 TSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR   D + N  
Sbjct: 117 TTRAFPVGAGSPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPRHRPDDTRNEF 176

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D  I S + MR 
Sbjct: 177 YIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQ 236

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + D  +    E 
Sbjct: 237 ALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHEK 295

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS   GSGN  
Sbjct: 296 RFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQ 355

Query: 451 VLDVLNLLEKGTNLFEQLFSTL 472
            LDVL  L K     + LF  L
Sbjct: 356 CLDVLRTLSKEPGALDALFDEL 377


>gi|121609177|ref|YP_996984.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553817|gb|ABM57966.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 568

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 183/528 (34%), Positives = 260/528 (49%), Gaps = 18/528 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ     G +A+  D++L + I             LG  V     QELAR+AN +TP+L 
Sbjct: 24  NQAQPASGYDAFGGDAVLRSAIEREAPWAASRCAALGAVVGDENVQELARLANRHTPELK 83

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D VEFHP+WHAL+  +    +    W R+ E    K  H  RA   YL  Q
Sbjct: 84  THDRFGNRIDWVEFHPSWHALMSLAWQHEVPNLTW-RTTE----KGGHFARAVLSYLWNQ 138

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E G      +  AS       P +   W  K     Y+ + +    K +V IG  +TEK
Sbjct: 139 VEQGTACPTGMAYASHAGFEAEPAL-AIWKEKSKGTTYEFSRREVGDKPAVVIGYAMTEK 197

Query: 206 RGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +GG+D+    +  +    G         Y L+GHKWF S P SD F  LA+V G V CF 
Sbjct: 198 QGGSDLRQTRTTARFSHSGDYHGAMAHWYELTGHKWFCSVPQSDGFFTLAKVNGGVTCFF 257

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR L DGS N    QRLK+K GN SNA+ E+E++ T    +G+       +     L  
Sbjct: 258 LPRTLPDGSYNRFFVQRLKDKAGNESNASSEVEYAGTLAIRVGEEGRGIREILSHAHLTR 317

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR +L  A+ +   R   G  L D+P+M   +AD+A+++ AAT ++ R+A
Sbjct: 318 LDFAVGSAGLMRQALTLALRHTTTRSAFGTPLADRPMMSNVLADMAVEVEAATLMALRVA 377

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D       E   ARI  P  K++ C  AP++  EA++C GG+G+IEE  +AR YRE+
Sbjct: 378 KATDLMACSEHEKLLARIATPAAKFFNCSRAPSIAYEALQCHGGNGFIEENPMARLYREA 437

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE- 496
           P NS+  G+ N M +DV   + K     E LF  L Q L +   +    +R +  L  E 
Sbjct: 438 PLNSVWEGTANMMCMDVRRAMTKDPRTVEALFDEL-QPLANQDARFDVQVRHTKRLVHEA 496

Query: 497 --DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
             D+ LAR +TE +A     A L R    ++ADVFL  R       +H
Sbjct: 497 VKDEFLARPMTEAVARVLQGAELIRHSSREVADVFLGTRSPGGSWGSH 544


>gi|326436924|gb|EGD82494.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 706

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 184/531 (34%), Positives = 283/531 (53%), Gaps = 20/531 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARM 76
           P      LNQ P      A+ SD +L + ++ + +    E +  +G+   S    ELAR 
Sbjct: 28  PPPQSRVLNQVPALENFAAFESDPILQSCVSFYGADFGTEQISYVGKLAGSQHVAELARD 87

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN N P  H++   G R D V++HPA+H +++     G+   I   S+    ++ +   R
Sbjct: 88  ANENIPVFHSHDRFGNRIDFVKYHPAYHEIMKL----GIEAEIPSYSWRNADKRGSAVAR 143

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP-RVHKDWAPKIFSREYDPTNKAPMQK 193
           +A  YLM Q E+G     ++T A + AL  MT   R   D+  K  + EYDP N    +K
Sbjct: 144 SALGYLMYQAESGTQCPQTMTYACVPALKHMTDEQRSVCDFLTKAITPEYDPRNVPATEK 203

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS------DGIYCLSGHKWFLSSPMSDAFIMLA 247
             + IG+ +TEK+GG+D+ A  +  + +          Y L+GHKWF S+PM DAF+ LA
Sbjct: 204 NGITIGMSMTEKQGGSDVRANITTAKPVDANKTGPGSAYFLNGHKWFTSAPMCDAFLTLA 263

Query: 248 QVEGRVGCFLVPRLLED-GSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           Q E  + CF+VPR +   G  N GL +QRLK+K+G+RSNA+ E+E+ N +  LLG     
Sbjct: 264 QTENGLSCFIVPRWVPSTGERNEGLRFQRLKSKVGDRSNASSEVEYHNAYAELLGPEGRG 323

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     LD  + +   M+ +L EA+++   R   G +L+D P+M+  +AD+ ++
Sbjct: 324 IAIILEMVQNTRLDCLVGTAGLMKRALFEAVNHTSHRSAFGSVLLDTPLMRAVVADLTIE 383

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AATAL+FR+A++FD A++   + A  RI   I KY  CK AP  + EAME +GG+GY+
Sbjct: 384 SEAATALAFRIASTFD-AQASEYDKALGRIATAIAKYHICKRAPQFVYEAMESLGGNGYV 442

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKKV 483
           +E  + R YR++P N+I  GSGN + LDVL    +  +  E L   L     +   G+K 
Sbjct: 443 DEGPMGRLYRQAPLNAIWEGSGNVICLDVLRCFHREPDAVEALMHELSSLGHVEEYGRK- 501

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              L+  I    +++G  R +    AL   A AL R     + D FL+ R 
Sbjct: 502 FNKLKAEIENIGQNQGRLRNIVGTAALLLQAVALSRTSTEAVVDAFLKTRL 552


>gi|317493578|ref|ZP_07951999.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918521|gb|EFV39859.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 544

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 182/530 (34%), Positives = 271/530 (51%), Gaps = 26/530 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
            NQP      N Y SD+ L   +    A + S +   L  +G  + S  + EL RMAN N
Sbjct: 9   FNQPNPLSNSNLYLSDTPLQEAVVREQAGWDSAL---LSAVGLQLGSAESLELGRMANAN 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y   G R D+V FHP+WH L++    + +H   W  +        +   RAAR 
Sbjct: 66  PPELLRYDAAGRRVDEVRFHPSWHMLMQGLTENRVHNLPWQNN----AVSGSFAARAARF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            L +Q+EAG L   ++T  ++  L    P     W   + S  YDP +    QK  + IG
Sbjct: 122 LLHSQIEAGTLCPITMTFGAIPLLQKCLPTSMNGWLMGLASNRYDPHSLPAEQKKGLLIG 181

Query: 200 LGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+   T+Q   +    S   Y + GHKWF S P SDA ++LAQ  G + C
Sbjct: 182 MGMTEKQGGSDVLTNTTQAIALEGQGSGKPYRIVGHKWFFSVPQSDAHLILAQASGGISC 241

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR+L DG+ N +  +RLK K+GNRSNA+ E+EF +  G+LLGD       +  M   
Sbjct: 242 FFVPRILPDGTRNAIRIERLKEKLGNRSNASAEVEFQDATGWLLGDEGDGVRLILQMGSA 301

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              D A+ S   MR +   A ++A +R   G  L +QP+M++  A + L +   T+L FR
Sbjct: 302 TRFDCALGSHGLMRRAFTVAFYHALQRQAFGKSLAEQPLMRQVFAKMTLRLEGQTSLLFR 361

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           L  S +    + E   + R+M P  K+  CK     +AEAME +GG GY EE  + R YR
Sbjct: 362 LCRSLEMPDVQGER-LFGRLMTPAAKFAVCKQGIPFVAEAMEALGGIGYCEESELPRLYR 420

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LC 494
           E P NSI  GSGN M LDVL +  K  ++ E++ S    D+      +    R+ +  L 
Sbjct: 421 EIPVNSIWEGSGNIMCLDVLRVWRKNPHM-EEMLSLELADVKGQNVLLDKAWRNLLKRLH 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN-------RFLDN 537
              +  AR +++++   ++AA L R    ++A+ + +        R +DN
Sbjct: 480 NPSEAEARIISDELFNINAAAQLLRFAPTEVAEAWCQQYHSSDGARVIDN 529


>gi|238764702|ref|ZP_04625646.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC
           33638]
 gi|238697098|gb|EEP89871.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC
           33638]
          Length = 557

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 175/519 (33%), Positives = 276/519 (53%), Gaps = 23/519 (4%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N + SD +L  A+         ++L  +G  + S  + EL R+AN N 
Sbjct: 21  LVFNQPEPLSNSNLFLSDMALREAVTRQQAGWDGEDLSRIGLQLGSQESLELGRLANANP 80

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  +   +H   W        R+ +   RAAR  
Sbjct: 81  PELLRYDAAGQRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARRGSFVARAARFI 136

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + IG+
Sbjct: 137 LHAQVEAGTLCPITMTFGAIPLLQQTLPSLFQSWLPPLLSDRYDSHQTVGDQKRGLLIGM 196

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLEVRGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 256

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GNRSNA+ E+EF +   +LLG+       +  M    
Sbjct: 257 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDHATAWLLGEEGDGIRQILKMGGYT 316

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++A +R   G  L++QP+M++ ++ +AL +   TAL  RL
Sbjct: 317 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALLMRL 376

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+++ +      E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R YRE
Sbjct: 377 ASAWGKP-GEVHEQIFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 435

Query: 437 SPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQD---LGSSGKKVITILRDS 490
            P NSI  GSGN M LDVL    K     ++ +Q F  +         S +++   L++ 
Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIDVLQQEFYPVRGQNRLFDRSWRQLQQRLKNP 495

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
               KE++G  R +T+++     A+ L R     +AD +
Sbjct: 496 ----KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 528


>gi|213163310|ref|ZP_03349020.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 424

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 239/420 (56%), Gaps = 7/420 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ L +       +  M  +  LD A+
Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLREEGEGIRHILKMGGMTRLDCAL 304

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA ++ E
Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI
Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423


>gi|85706346|ref|ZP_01037440.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669119|gb|EAQ23986.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 542

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/467 (35%), Positives = 250/467 (53%), Gaps = 11/467 (2%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +E  R AN + P+L  +  GG R D+V FHPA+H L+R  I  G     W+ +      +
Sbjct: 61  REAGRAANRHPPELVLFDAGGRRLDEVRFHPAYHDLMRVGIGAGYAALAWEGA------R 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             H   AA +Y+ +Q+E G     ++T A++ AL     +  DW PK+ +R YDP  K  
Sbjct: 115 GGHASHAAMVYMTSQVEPGVCCPMTMTYAAVPALRVDKALLADWVPKLTARTYDPGAKPL 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            +K    +G+ +TEK+GG+DI A  +      D  Y L GHKWF S+PMSD F+ LAQ  
Sbjct: 175 ARKPGATLGMAMTEKQGGSDIRATATTATPEGD-TYRLVGHKWFCSAPMSDGFLTLAQAP 233

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CFLVPR LE G  NG+  QRLK+K+GNR+NA+ E+E+     + LGD +     + 
Sbjct: 234 EGLTCFLVPRWLEGGR-NGIQIQRLKDKLGNRANASAEIEYHGAIAYRLGDESAGLRTIL 292

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD+A+     MR +L +A ++A  R      LIDQP+M+  +AD+ALD     
Sbjct: 293 EMVHHTRLDTAMAPAGLMRAALDQAQYWACHRSAFQKRLIDQPLMRAVLADLALDWEGTL 352

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL   +A +FD     + + A+AR+   + K+   K+ P V+ EAME +GG GY+E+  +
Sbjct: 353 ALGLHVARAFD--GRGAADRAFARLGVALAKFMGNKLCPCVVYEAMEAMGGMGYVEDTPL 410

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
              YRE+P NSI  GSGN + LD+L  L K     E L + L    G   +    +    
Sbjct: 411 PMLYREAPLNSIWEGSGNVICLDILRTLRKEPLAGEVLSAELASVAGQDSRFDAALKAHM 470

Query: 491 ISLCK-EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
            +  K  D+  AR+  E +A   +A+ L R   + +A  ++  R  D
Sbjct: 471 QTFPKLPDEAQARWYAESLATLLTASVLMRHAPDAVASAYIATRLSD 517


>gi|318607410|emb|CBY28908.1| alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 435

 Score =  283 bits (723), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 160/434 (36%), Positives = 241/434 (55%), Gaps = 11/434 (2%)

Query: 23  FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
              NQP      N Y SD +L  A++        ++L  +G  + S  + EL R+AN N 
Sbjct: 7   LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 66

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAAR  
Sbjct: 67  PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 122

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + IG+
Sbjct: 123 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 182

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           G+TEK+GG+D+ + +++ + ++       Y L GHKWF S P SDA ++LAQ EG + CF
Sbjct: 183 GMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 242

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M    
Sbjct: 243 FLPKMLPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 302

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D A+ S   MR + + A+++  +R   G  L+DQP+M++ ++ +AL +   TAL  RL
Sbjct: 303 RFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 362

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AN++ E    + E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R YRE
Sbjct: 363 ANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 421

Query: 437 SPANSILLGSGNAM 450
            P NSI  GSGN M
Sbjct: 422 MPVNSIWEGSGNIM 435


>gi|325519771|gb|EGC99075.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 424

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 163/430 (37%), Positives = 243/430 (56%), Gaps = 20/430 (4%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S     LA  AN + P+ + +   G R D+VEFHPAWHALL      GL+    ++ F  
Sbjct: 1   SAETARLADEANRHPPEPNIFDRRGRRIDRVEFHPAWHALL------GLYR---NQGFVS 51

Query: 127 VVRKQAHKIR----AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +  + A   R    AA  YL  Q+EAG L   ++T A++  L   P +      +++S +
Sbjct: 52  LAFRDARPGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWALLRDRLYSDD 111

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSP 238
           YDP +     K S+  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+P
Sbjct: 112 YDPRDVPIADKRSIWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAP 171

Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           M DA +++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G 
Sbjct: 172 MCDAHLVVARTEAGSPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGI 231

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LGD       + +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+ 
Sbjct: 232 MLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRT 291

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+AL+  AA  L+ RLA++F+   S   E A+ RI+ P  K+W CK A  +  E ME
Sbjct: 292 VLADLALESEAALVLAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVME 350

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG+GY+++  IAR +RE+P NSI  GSGN M LDVL  + +  +    L + L  DLG
Sbjct: 351 VFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAEL-SDLG 409

Query: 478 SSGKKVITIL 487
           +   ++   L
Sbjct: 410 AGEPRIRAAL 419


>gi|255321229|ref|ZP_05362395.1| protein AidB [Acinetobacter radioresistens SK82]
 gi|255301783|gb|EET81034.1| protein AidB [Acinetobacter radioresistens SK82]
          Length = 549

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 25/533 (4%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           N + +D +L  ++    S     L  LG    S    + A  AN  TP+L A+   G R 
Sbjct: 20  NLFDTDPILQEILQRHQSQDQARLSQLGTIAGSAEYYQYAEQANRYTPELKAFDARGRRC 79

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D +EFHPAWH  +  +    +H       F      Q     AAR YL  Q+E G L   
Sbjct: 80  DVIEFHPAWHQWMALNRSYEVHAY----PFSKPDDAQGWLNWAARFYLNGQIECGSLCPT 135

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++T  S+  L   P + +    K+ S+ YD  +    QK S+ +G+G+TEK+GG+D+ A 
Sbjct: 136 AMTLGSIPLLQREPALWQQLGDKLLSQHYDVRDLPIDQKKSIWLGMGMTEKQGGSDVRAN 195

Query: 215 TSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNG 269
            ++    GQ+     Y ++GHKWF S+PM DA +++A  E   + CF VPR LEDG  N 
Sbjct: 196 QTKAVPVGQRGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLACFFVPRWLEDGRKNS 255

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +  QRLK+K+GNRSN++ E+EF   +G +LG+       + +M     L   + S + +R
Sbjct: 256 IHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAYTRLTCVVGSSAMLR 315

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L + + Y R+R   G  L  QP+M+  + D+AL+  AA  L+  LA+ + +    S+ 
Sbjct: 316 QALVQCLAYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMHLASCYQQDDPLSK- 374

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A+ R+M P  K+W CK    +  EAME  GG+GY+E   +AR +RE+P NSI  GSGN 
Sbjct: 375 -AWQRLMTPAAKFWICKRVVELSGEAMEVFGGNGYVETGIMARIFREAPVNSIWEGSGNV 433

Query: 450 MVLDVLNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           M LDVL  +++     E L   F+   QD     +++  +L+       + + +AR L  
Sbjct: 434 MCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQSPDQLQFMARTLVS 493

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA---AHIID 556
           ++ + + A  L +   + +A+ F++ R+           HGR       H++D
Sbjct: 494 RLVMLAQAVLLKKYAPDFVANAFIQTRY--------TAFHGRVTGLIDLHLVD 538


>gi|121602440|ref|YP_989126.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis
           KC583]
 gi|120614617|gb|ABM45218.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis
           KC583]
          Length = 541

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 166/533 (31%), Positives = 295/533 (55%), Gaps = 15/533 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L++ + +  P  + +  + +G +V S  A +L+R+AN + P LH     G+R 
Sbjct: 13  NAFFSDTLMLRVASTLPESLLENFQEVGAFVASREAWDLSRLANRHRPVLHHNNEWGQRI 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +++E HP+++ L R S   GL  S+W+  + E  VR QA   RA RL L A LE GHL  
Sbjct: 73  EQLEMHPSYYTLQRYSRQMGLVSSLWENITVENGVRYQA---RAIRLILSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR---G 207
             +TSA++  L+    + K W   + SR+YD ++K    K   ++      + E R    
Sbjct: 130 VVITSAAIAVLVGNSELFKRWQNVLLSRQYDFSSKPIHHKKGASLSCAFDDIEESRKHFS 189

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
              +A   S  +KI   +Y L+  K  + +P++D +++ A+++GR+ CF VPRL E+G  
Sbjct: 190 SFSMAQKISFDEKIGCDLYNLNITKTNVVNPIADGYLVSAEIDGRLNCFFVPRLQENGEL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG+   R L  + G  S     ++F N++G+LLG++   T  ++D++ ++  D +++S  
Sbjct: 250 NGIISVRHLIQRSGEHSVPEGSVDFQNSYGWLLGNIGEGTKIIKDVETMVRFDQSVISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L   I + R++  +  +    P+ +R  +DIALDIAA+ AL FRLA +FD A + 
Sbjct: 310 VLRAALQFGIDFFRQKMPNQPL---PPLTERIFSDIALDIAASQALVFRLAWAFDNAVND 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+A IM PI  Y   ++   +I E +  +G   +IE   +++  R+  A  IL  +
Sbjct: 367 RSEAAFAHIMTPIVAYHVNQLVIPIIGEIIAQLGLESFIEGNPLSQMLRDGSAR-ILRNN 425

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + ++ K   LF++L   +  D+G +G + I I++ +  +   ++G  RF  E
Sbjct: 426 ANQLVKDAILIVNKAPGLFQKLLEKIATDIGPAGPRAIEIIKSAAQMASTNEGAGRFFVE 485

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A A +AA+L    M+ + + ++E+R      S++ M+  R+N   +++ LY
Sbjct: 486 QVAYAGAAASLRCKKMDYVVNAYMESRLGGQWRSSYGMMIARYNPLELLNILY 538


>gi|319786941|ref|YP_004146416.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465453|gb|ADV27185.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 544

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 191/535 (35%), Positives = 292/535 (54%), Gaps = 24/535 (4%)

Query: 17  QPS--DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73
           QPS  ++    NQPP F   + +  D +L  A++          L+  G    +    EL
Sbjct: 2   QPSRFETHVVENQPPAFAPRDLWGDDLALREAVVRGGAGAFTARLQAYG----ALAGDEL 57

Query: 74  ARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            R+   AN + P+L  +   G R D VEFHPA+H L+  +   G+    W    EPV   
Sbjct: 58  YRLGFDANRDRPRLRTHDAQGRRIDLVEFHPAYHRLMELAKAHGVAGLSW---HEPV--P 112

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A   RAA  YL  Q EAG     ++T A++  L   P + + WA    +  YDP +   
Sbjct: 113 GAQVARAALAYLHHQAEAGTSCPLTMTHAAVPVLRQAPALAQ-WARLAAAPAYDPRDVPM 171

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
             KT + +G+G+TEK+GG+D+   T+    +   +G + L GHKWF S+PMSD F++LAQ
Sbjct: 172 AAKTGLTLGMGMTEKQGGSDVRGNTTTATPLPGREG-WRLVGHKWFFSAPMSDGFLVLAQ 230

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +GCFL+PR L DGS N     RLK+K+G+ SNA+ E+EF +   + +G+       
Sbjct: 231 TPDGLGCFLLPRRLPDGSKNAFRLMRLKDKLGDWSNASSEVEFCDALAWPVGEPGRGVAT 290

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M +L  LD  + + +  R+++A+A+H+AR R   G +L+  P+M   +AD+A++  A
Sbjct: 291 IIPMVMLTRLDCMLAAAAQARMAMAQAVHHARHRVTFGRVLVGHPLMANVLADLAIESEA 350

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT L+  +A + +  +  +  AAYAR+   + KYW C+ APA++ EA EC+GG+GY+EE 
Sbjct: 351 ATVLALDVAAAVEAGQGDAGAAAYARVATAVGKYWLCRRAPALVNEAQECLGGAGYVEES 410

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVIT 485
            + R YR++P NSI  GSGN   LDVL  L +   + + L   LE+  G      ++   
Sbjct: 411 LLPRLYRQAPLNSIWEGSGNIQCLDVLRALAREPQVAQALRGALERAAGFDPVLAREAEA 470

Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           I R   +   E +  AR+L E+IAL    AAL+ AG + +A+ F+ +R LD  H 
Sbjct: 471 IGRQLAAPAAELEVRARYLVERIALVLQGAALHAAG-SPVAEAFVRSR-LDGAHG 523


>gi|167921049|ref|ZP_02508140.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
          Length = 546

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRSELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|167904835|ref|ZP_02492040.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
          Length = 546

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|126439329|ref|YP_001060948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|134281474|ref|ZP_01768182.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|226193162|ref|ZP_03788772.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814331|ref|YP_002898782.1| protein AidB [Burkholderia pseudomallei MSHR346]
 gi|126218822|gb|ABN82328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|134247141|gb|EBA47227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|225934762|gb|EEH30739.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504594|gb|ACQ96912.1| protein AidB [Burkholderia pseudomallei MSHR346]
          Length = 546

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|76810278|ref|YP_331576.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167847872|ref|ZP_02473380.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|254184010|ref|ZP_04890601.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|254186476|ref|ZP_04892993.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194570|ref|ZP_04901001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254258200|ref|ZP_04949254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|254298716|ref|ZP_04966167.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|76579731|gb|ABA49206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157808475|gb|EDO85645.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157934161|gb|EDO89831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651320|gb|EDS84013.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|184214542|gb|EDU11585.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|254216889|gb|EET06273.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 546

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|167740775|ref|ZP_02413549.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 538

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 186/519 (35%), Positives = 274/519 (52%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             + L R L ++IAL + A  L  A    ++D F+  RF
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRF 517


>gi|126454558|ref|YP_001068248.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242314546|ref|ZP_04813562.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|126228200|gb|ABN91740.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|242137785|gb|EES24187.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 546

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|53720992|ref|YP_109978.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|53724026|ref|YP_104472.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67643102|ref|ZP_00441851.1| protein AidB [Burkholderia mallei GB8 horse 4]
 gi|121601096|ref|YP_994621.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385909|ref|YP_001027553.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126451248|ref|YP_001082549.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|167000125|ref|ZP_02265948.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|217423893|ref|ZP_03455393.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|254174798|ref|ZP_04881459.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254201549|ref|ZP_04907913.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254206885|ref|ZP_04913236.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|254357440|ref|ZP_04973714.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52211406|emb|CAH37397.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|52427449|gb|AAU48042.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121229906|gb|ABM52424.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124293929|gb|ABN03198.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126244118|gb|ABO07211.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147747443|gb|EDK54519.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147752427|gb|EDK59493.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|148026504|gb|EDK84589.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160695843|gb|EDP85813.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|217392956|gb|EEC32978.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|238524353|gb|EEP87786.1| protein AidB [Burkholderia mallei GB8 horse 4]
 gi|243063931|gb|EES46117.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 546

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553
             + L R L ++IAL + A  L  A    ++D F+  RF +      T  +   R +AA 
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538

Query: 554 IIDSLY 559
           ++   Y
Sbjct: 539 LLQRAY 544


>gi|319898953|ref|YP_004159046.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73]
 gi|319402917|emb|CBI76468.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73]
          Length = 542

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 293/533 (54%), Gaps = 14/533 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN   P L      G+  
Sbjct: 13  NAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSYRPTLRYNNGWGQPK 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSF-EPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           ++++ HP++H L R S   GL  S+W+ +  E  VR QA   RA RL L+A LE GHL  
Sbjct: 73  EELDIHPSYHTLQRYSRQAGLVASLWENTTSENGVRYQA---RAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
             V SA++  L+    + K W   + SR+YD ++KA   K   ++          ++   
Sbjct: 130 IIVASAAIAVLIGDVELFKKWKDMLLSRQYDLSSKAIDNKKGASLTYAFDNIEESEKYAL 189

Query: 210 DIAAI--TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           ++ A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFLVPR+ E+G  
Sbjct: 190 NVPAVQRISFDEKMGRDLYRLNIIKTQVINPMADGYIVSAEIDGLLSCFLVPRMQENGLL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG+   R L  + G  S     +EF +  G+LLG++      ++D++ ++  D AI+S  
Sbjct: 250 NGIILVRYLIQRSGEYSAPEGVVEFRDCCGWLLGNIGEGAKVIKDIETMMRFDQAIISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  +I++ R++ ++       P+ +R  ADIALDIAA+ AL  RLA +FD A S 
Sbjct: 310 VLRAALQFSINFLRQKMLNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAASN 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI      ++   ++ E +  +G   +++   + +  R+SPA  +    
Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIVGEIIAQVGIESFMDNNPLLQILRDSPARIVKNSG 426

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF  E
Sbjct: 427 VNQLVKDAILIGDKAPGLFQQLLEKISADIGPAGPRAIEIIKSAVNMASTNEGAGRFFVE 486

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A AS++AAL    +  + + ++E+R      S++ ML  R+N A ++D LY
Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYNPAQLLDVLY 539


>gi|167826352|ref|ZP_02457823.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
          Length = 531

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 186/519 (35%), Positives = 274/519 (52%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             + L R L ++IAL + A  L  A    ++D F+  RF
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRF 517


>gi|73539910|ref|YP_294430.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72117323|gb|AAZ59586.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 553

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/405 (38%), Positives = 235/405 (58%), Gaps = 12/405 (2%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+LH Y   GER D+V FHP+WHALL       L    +    EP  R  A   R
Sbjct: 63  ANRYAPELHTYSRTGERVDQVTFHPSWHALLSLLRSQQLQAMPFA---EP--RAGAWIAR 117

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A  +L AQ+E+G L   ++T AS+  L     +  D  P+++++ +D  +     KT++
Sbjct: 118 TAGYFLQAQVESGSLCPITMTFASIPVLRKETALFADLEPRLYAKNHDARDLPWRDKTAI 177

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV--- 249
            IG+G+TEK+GG+D+ A T+    +        Y L+GHKWF S+PM DA +++A++   
Sbjct: 178 MIGMGMTEKQGGSDVRANTTVAHPVRGEGRGAEYLLTGHKWFFSAPMCDAHLVVARMGAE 237

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G + CF VPR  +DGS N +  QRLK+K+GNRSN++ E+EF    G L+G+       +
Sbjct: 238 DGPLSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNSSSEVEFREASGILIGEEGRGIPTI 297

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     LD  I S + +R +  +A+H+ R R   G +L DQP+M+  +AD+AL+  AA
Sbjct: 298 IEMATSTRLDCVIGSAAILRAAYVQALHHTRHRAAFGSLLADQPLMRNVLADLALESEAA 357

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T L   LA++F+ A++    AA+ R++ P  K+W CK       EAME  GG+GY+E+  
Sbjct: 358 TLLMMELAHAFEHAETDPLAAAWKRVVTPAAKFWICKRTIEATGEAMEVWGGNGYVEDGP 417

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           +AR YRE+P NSI  GSGN M LDVL  +++  +   +L   L +
Sbjct: 418 MARLYREAPVNSIWEGSGNIMCLDVLRAIQRTPDDAARLLHDLSR 462


>gi|325003190|ref|ZP_08124302.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 551

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/437 (38%), Positives = 250/437 (57%), Gaps = 11/437 (2%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE L E + +   +E AR AN + P+LH +   G R D+V FHP+WH L+R S+  GL  
Sbjct: 55  LESLAERIGTAAHREHARAANAHEPELHTHDRTGHRIDEVGFHPSWHELMRVSVEHGLAA 114

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
           + W  +        AH  RAA  YL +Q+E GHL   S+T A++ AL   P +   + P 
Sbjct: 115 APWAAAPG----TGAHVTRAAGFYLHSQVEQGHLCPISMTYAAVPALQHAPELAAAYLPG 170

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + +R Y+P    P  K+ +  G+ +TEK+GG+D+ + ++      DG Y L+GHKWF S+
Sbjct: 171 LTARSYEPGLADPATKSGLLAGMSMTEKQGGSDVRSGSTVAVPQPDGSYRLTGHKWFTSA 230

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           PM+D F+ LAQ  G + C ++PR+L DG+ N +  QRLK+K+GNRSNA+ E+E+S   G+
Sbjct: 231 PMNDLFLTLAQAPGGLTCLVLPRVLPDGTRNAIRLQRLKDKLGNRSNASSEIEYSGAAGW 290

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G+       + +M  +  LD  + +    R ++ EA H+   R   G  L DQP+M+ 
Sbjct: 291 RVGEEGRGVRTIIEMVSMTRLDCVLGAAGTQRAAVTEAAHHVAHRSAFGARLADQPLMRE 350

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A +  AAT L+ RLA + D       E A  R+  P  KY  CK   AV+AEA+E
Sbjct: 351 VVAELAAESEAATVLALRLAGAVDRG-----ETALLRLALPAAKYLVCKRTSAVVAEALE 405

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           C+GG+GY+EE  + R YRE+P NSI  GSGN   LDVL  + +     + L + ++   G
Sbjct: 406 CLGGNGYVEESDLPRLYREAPLNSIWEGSGNVTALDVLRAIAREPAAVDALLAEIDLGAG 465

Query: 478 SSGK--KVITILRDSIS 492
           S  +   VI  LR  ++
Sbjct: 466 SDPRLDAVIAALRAELA 482


>gi|149201829|ref|ZP_01878803.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149144877|gb|EDM32906.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 543

 Score =  279 bits (714), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 258/487 (52%), Gaps = 21/487 (4%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           + L   G  + + T +   R AN + P+L  +  GG R D+V FHP +H L+R  I  G 
Sbjct: 46  ETLAAYGARIGTETLRSAGRAANRHPPELVLFDAGGRRLDEVRFHPTYHDLMRVGIGAGY 105

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               W+ +      K  H   AA +YL +Q+E G     ++T A++ AL +   +  DW 
Sbjct: 106 AAIPWEGA------KGGHVTHAAMVYLTSQVEPGVCCPMTMTYAAVPALRSDKALFADWV 159

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ +R YDP  K   +K    +G+ +TEK+GG+DI A  +         Y L GHKWF 
Sbjct: 160 PKLTARAYDPGAKPLARKPGATLGMAMTEKQGGSDIRANATTATP-EGAFYRLFGHKWFC 218

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           S+PMSD F+ LAQ    + CFLVPR LE G+ N +  QRLK+K+GNR+NA+ E+E+    
Sbjct: 219 SAPMSDGFLTLAQAPEGLTCFLVPRWLE-GARNEIQIQRLKDKLGNRANASAEIEYHGAI 277

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            + LGD       + +M     LD+A+     MR +L  A H+A  R V    LIDQP+M
Sbjct: 278 AYRLGDEGAGICTILEMVHHTRLDTAMAPAGLMRAALDHARHWAHHRSVFQRQLIDQPLM 337

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ALD     AL   +A +FD  +S +E  A+AR+   + K+   K+ P V+ EA
Sbjct: 338 RAVLADLALDWEGTLALGLHVARAFD-GRSPAER-AFARLGVALAKFLGNKLCPGVVYEA 395

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK----GTNLFEQLFST 471
           ME +GG GYIE+  +   YRE+P NSI  GS N + LD+L  L K    G  L  +L S 
Sbjct: 396 MEAMGGMGYIEDTPLPLLYREAPLNSIWEGSANVICLDILRTLRKEPLAGEVLTAELASV 455

Query: 472 LEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             QD     ++    L+  +    +  ++  AR+  E +A   +A+ L R   + +A  +
Sbjct: 456 AGQD-----RRFDAALKAHMQTFPKLPEEAQARWYAESLATLLTASVLMRHAPDAVAQGY 510

Query: 530 LENRFLD 536
           +  R  D
Sbjct: 511 IATRLSD 517


>gi|221069663|ref|ZP_03545768.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714686|gb|EED70054.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 558

 Score =  279 bits (714), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 175/479 (36%), Positives = 265/479 (55%), Gaps = 23/479 (4%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E A +AN +TP+L  +   G   D VEFHP+WH L++     GL  S+    FE   R +
Sbjct: 58  EHAELANRHTPELQRFDARGRVLDAVEFHPSWHRLMQLYREQGL-ISL---PFESQGRGR 113

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                AA  YL  Q+E G L   ++T+A++  L   PR+      ++FS EYDP +    
Sbjct: 114 -WSAWAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPRLWSQLQAQLFSHEYDPRDLPLA 172

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLA 247
           QK S+ IG+G+TEK+GG+D+ A T+  + + DG     Y L GHKWF S+PM DA +++A
Sbjct: 173 QKKSIWIGMGMTEKQGGSDVRANTTVARPVHDGGRGGEYLLRGHKWFFSAPMCDAHLVVA 232

Query: 248 QV---EGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++    G +G   CF VPR   DGS N L  QRLK+K+GNRSN++ E+E  + +G L+G+
Sbjct: 233 RMATASGELGGHACFFVPRWRPDGSKNPLRVQRLKDKVGNRSNSSAEVELQDAWGILMGE 292

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD
Sbjct: 293 EGRGIPTIIEMASYTRLNCVLGSAAIVRSATVQSIAYARQRSAFGKHLSDQPLMASVLAD 352

Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +AL+  A+  L+  LA +++ EA       A+ RIM P  K+W CK +  +  EAME  G
Sbjct: 353 LALESEASMQLAMHLAQAYESEADGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFG 412

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GY++E  ++R +RE+P NSI  GSGN M LDVL  + +       L   L  D+ +  
Sbjct: 413 GNGYVQESIVSRLFREAPVNSIWEGSGNVMCLDVLRAMGREPEAARLLLQDLS-DMAAD- 470

Query: 481 KKVITILRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             ++T +  S++  L      L   AR L + + L + A  L+R     +AD F++ R 
Sbjct: 471 HPLLTAMTQSLARRLSAAPDALEPQARRLVQDLCLLAQACLLHRHAPAPMADGFIQTRL 529


>gi|293393204|ref|ZP_06637519.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582]
 gi|291424350|gb|EFE97564.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582]
          Length = 542

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 182/520 (35%), Positives = 275/520 (52%), Gaps = 23/520 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
            NQP      N + SD+ L   +    A + + V   L  LG+ + +  + EL R+AN N
Sbjct: 9   FNQPKPLGNSNLFLSDTPLREAVQREHAGWDADV---LASLGQQLGTQESLELGRLANAN 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y   G+R D + FHPAWH L++  + + +H   W    E   R  +   RAAR 
Sbjct: 66  PPELLRYDASGQRLDDLRFHPAWHILMQGLVANRVHNLPW----EEQARIGSVAARAARF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            L AQ+EAG L   ++T  ++  L  + P   +DW P + S  YD       QK  + IG
Sbjct: 122 ILHAQVEAGTLCPITMTYGAIPLLQRSLPAPFRDWLPPLLSDRYDAHLLPGGQKRGLLIG 181

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ + T+    ++   DG  Y L GHKWF S P SDA ++LAQ EG + C
Sbjct: 182 MGMTEKQGGSDVLSNTTSATPLAGRGDGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLSC 241

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F +PR+L DG+ N +  +RLK+K+GNR+NA+ E+EF +   +LLGD       +  M   
Sbjct: 242 FFLPRILPDGTRNAVRLERLKDKLGNRANASSEVEFQDATAWLLGDEGDGVRQILKMGSQ 301

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              D A+ S   MR +L+ A+++A +R   G  LI QP+M++ +A +AL +   TA   R
Sbjct: 302 TRFDCALGSHGLMRRALSVALYHAHQRQAFGKTLIQQPLMRQVMAGMALRLEGQTAALMR 361

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA ++  ++         RIM    K+  C+     +AEAME +GG GY E+  + R YR
Sbjct: 362 LARAYG-SQQEPLSQGLCRIMTSAAKFDVCRQGIPFVAEAMEVLGGIGYCEDSELPRLYR 420

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSIS 492
           E P NSI  GSGN M LDVL    K   + E +   L +  G +    ++   +L+ +  
Sbjct: 421 EMPVNSIWEGSGNIMCLDVLRAWAKSPLVQEAVHQELAEVKGQNRHYDRQWRQLLQQTGK 480

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           L +     AR LT ++    +AA L R     IA+ + ++
Sbjct: 481 LQETQ---ARALTGRLFTLFAAAQLLRYASPPIAEAWCQS 517


>gi|167571746|ref|ZP_02364620.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 546

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 185/519 (35%), Positives = 275/519 (52%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    I  N +++D  L  AL     S     L+  G  + +    + A  AN + P+L
Sbjct: 10  NQFDELIDYNLFATDPALGEALERAGASWAAPRLDAYGARLGARDTAQRAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL  S+  R      R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYRGQGL-ISLAFRD----ARAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A +  L   P +      K++S  +DP +     K S+ +G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAGIPVLQKEPALWAQLKDKLYSDVHDPRDVPIDAKQSITLGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTVAAPVGAGGRGGDYLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVLIQRLKNKVGNRSNSSSEVELDDAWGVMLGEEGRGIPTIIEMANYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FER-----REPAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGRDARIRAELDALRALLGTPPD 478

Query: 497 DK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  L R L ++IAL + A  L  A    ++D F+  RF
Sbjct: 479 AREALGRVLAQRIALVAQACLLLDAAPAAVSDGFITTRF 517


>gi|262380086|ref|ZP_06073241.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           radioresistens SH164]
 gi|262298280|gb|EEY86194.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           radioresistens SH164]
          Length = 549

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 173/540 (32%), Positives = 276/540 (51%), Gaps = 39/540 (7%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           N + +D +L  ++    S    +L  LG    S    + A  AN  TP+L A+   G R 
Sbjct: 20  NLFDTDPVLQEILQRHQSQDQAKLSQLGAIAGSAEYYQYAEQANRYTPELKAFDARGRRC 79

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFE----PVVRK---QAHKIRAARLYLMAQLE 147
           D +EFHPAWH  +             +RS+E    P ++    Q     AAR YL  Q+E
Sbjct: 80  DVIEFHPAWHQWMAL-----------NRSYEVHAYPFIKPDDAQGWLNWAARFYLNGQIE 128

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G L   ++T  S+  L   P + +    K+ S+ YD  +    QK S+ +G+G+TEK+G
Sbjct: 129 CGSLCPTAMTLGSIPLLQREPALWQQLGDKLLSQHYDARDLPISQKKSIWLGMGMTEKQG 188

Query: 208 GTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLL 262
           G+D+ A  ++    GQ      Y ++GHKWF S+PM DA +++A  E   + CF VPR L
Sbjct: 189 GSDVRANQTKAVPVGQHGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLACFFVPRWL 248

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +DG  N +  QRLK+K+GNRSN++ E+EF   +G +LG+       + +M     L   +
Sbjct: 249 DDGRKNSIHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAYTRLTCVV 308

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S + +R +L + + Y R+R   G  L  QP+M+  + D+AL+  AA  L+  LA  + +
Sbjct: 309 GSSAMLRQALVQCLTYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMHLACCYQK 368

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S+  A+ R+M P  K+W CK    +  EAME  GG+GY+E   ++R +RE+P NSI
Sbjct: 369 DDPLSK--AWQRLMTPAAKFWICKRVVELSGEAMEIFGGNGYVETGIMSRIFREAPVNSI 426

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
             GSGN M LDVL  +++     E L   F+   QD     +++  +L+       + + 
Sbjct: 427 WEGSGNVMCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQSPDQLQF 486

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA---AHIID 556
           +AR L  ++ + + A  L +   + +A+ F++ R+           HGR       H++D
Sbjct: 487 MARTLVSRLVILAQAVLLKKYAPDFVANAFIQTRY--------TAFHGRVTGLIDPHLVD 538


>gi|167587918|ref|ZP_02380306.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 550

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/436 (38%), Positives = 246/436 (56%), Gaps = 12/436 (2%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           +L+  G  + S    +LA  AN+  P+LHA+   G R D+VEFHPAWHALL     +G  
Sbjct: 42  QLDAYGARLGSADTAQLADDANHYPPELHAFDRRGRRIDRVEFHPAWHALLGLYRAEGF- 100

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            S+  R   P          AA  YL  Q+EAG L   ++T A++  L   P + +    
Sbjct: 101 VSLAFRDTRP----GRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEMLRD 156

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHK 232
           K++S  YDP +     K S+ IG+G+TEK+GG+D+ A T+    +      G Y L GHK
Sbjct: 157 KLYSDVYDPRDVPVADKRSIWIGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHK 216

Query: 233 WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           WF S+PM DA +++A+ + G   CF VPR   DG+ N +  QRLK+K+GNRSN++ E+E 
Sbjct: 217 WFFSAPMCDAHLVVARTDAGGPSCFYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIEL 276

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
            + +G +LGD       + +M     L+  + S + +R  + +AI Y R+RH  G  L +
Sbjct: 277 DDAWGIMLGDEGRGIPTIIEMATCTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAE 336

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           QP+M+  +AD+AL+  AA AL+ RLA +F E      E A+ RI+ P  K+W CK A  +
Sbjct: 337 QPLMRTVLADLALESEAALALAMRLAAAF-ERDDTPRERAWKRIVTPAAKFWVCKRAVEL 395

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             E ME  GG+GY+++  IAR +RE+P NSI  GSGN M LDVL  + +  +    LF  
Sbjct: 396 TGEVMEVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDE 455

Query: 472 LEQDLGSSGKKVITIL 487
           L ++LG    ++   L
Sbjct: 456 L-RELGGDEPRIRAAL 470


>gi|119383699|ref|YP_914755.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119373466|gb|ABL69059.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 542

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 181/517 (35%), Positives = 271/517 (52%), Gaps = 24/517 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           LNQP      + +  D LL A++A   + + + L   G  +     ++ AR AN + P+L
Sbjct: 15  LNQPADPGDRDLWRDDPLLRAMLAAGGAPL-EGLARYGALLGRAGMRDAARDANRHPPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +  GG R D++ FHPAWH  ++ SI  G H   W+           H   AA +YL +
Sbjct: 74  VLFDSGGRRLDELRFHPAWHRFMQDSIAAGYHSVAWEGG------PAGHLTHAAMVYLAS 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E GH    ++T A++  +     +  DW   + SR YDP  +    K    +G+ +TE
Sbjct: 128 QVEPGHCCPLTMTYAAVPVISAAGDLPGDWRAALLSRRYDPAVRPLAAKQGATLGMAMTE 187

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           K+GG+D+ A T++ +   DG  + L+GHKWF S+PMSD F+ LAQ    + CFLVPR LE
Sbjct: 188 KQGGSDVRANTTRAEP--DGAAWRLTGHKWFCSAPMSDGFLTLAQTGRGLTCFLVPRWLE 245

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +G  N +  QRLK+K+GNRSN + E+E+     + +G+       + +M     LD+A+ 
Sbjct: 246 EGR-NAIRIQRLKDKLGNRSNGSAEIEYQRALAWRIGEEGDGIRTIVEMVHHTRLDTAMA 304

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
               MR +L EA H+A  R      LIDQP+M+  +AD+ LD     AL   +A SFD  
Sbjct: 305 PAGLMRAALREAHHWAACRSAFQRRLIDQPLMRAVLADLVLDWQGCLALGLHVAASFD-- 362

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              +E+ A+ARI   + KY   K+ P V+AEAME +GG GY+E+  +   YRE+P N I 
Sbjct: 363 GRGAEDRAFARIGVALAKYLSNKLCPQVVAEAMEVLGGMGYVEDTPLPMLYREAPLNGIW 422

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
            GSGN + LD L  L +     E L + L+     + K +      +++  +E  G    
Sbjct: 423 EGSGNVICLDALRTLAREPLAAEMLAARLD-----AAKGLEPAYDAALAAHRECWGGGVP 477

Query: 500 --LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              AR+  E+ AL  +AA L   G  D+A  F+  R 
Sbjct: 478 EAEARWFAERSALLLTAAVLLAHGDADLAGAFVRTRL 514


>gi|264676236|ref|YP_003276142.1| acyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
 gi|262206748|gb|ACY30846.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 558

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 287/533 (53%), Gaps = 36/533 (6%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANY 79
            NQ     G+N   +D+ L  ++      +F   +++  + LGE        E A +AN 
Sbjct: 10  FNQFDELTGINLLQADAALQEVLQRQQAQSFAPALNRFAQQLGEK----QNWEHAELANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L  +   G   D VEFHP+WH L+      GL  S+    FE   R +     AA 
Sbjct: 66  HTPELQRFDARGRVLDAVEFHPSWHRLMELYRKQGL-ISL---PFESPSRGR-WSAWAAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T+A++  L   P++      ++FS EYD  +    QK S+ IG
Sbjct: 121 FYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLDQKKSIWIG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ A T+  + + +G     Y L GHKWF S+PM DA +++A++    G 
Sbjct: 181 MGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVARMATASGE 240

Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+E  + +G L+G+       +
Sbjct: 241 LGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGEEGRGIPTI 300

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD+AL+  A+
Sbjct: 301 IEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLADLALESEAS 360

Query: 370 TALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L+  LA +++ EA+      A+ RIM P  K+W CK +  +  EAME  GG+GY+++ 
Sbjct: 361 MQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFGGNGYVQDS 420

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITI 486
            +AR +RE+P NSI  GSGN M LDVL  + +       L     QDLG  ++ + ++T 
Sbjct: 421 IVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLL----QDLGDMAADQPLLTA 476

Query: 487 LRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           +  S++  L    + L   AR L + + L + A  L+R     +AD F+  R 
Sbjct: 477 MAQSLAKRLSDSPEALEPQARRLVQDLCLLAQACLLHRHAPEHMADGFIHTRL 529


>gi|260432495|ref|ZP_05786466.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416323|gb|EEX09582.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157]
          Length = 560

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 179/512 (34%), Positives = 267/512 (52%), Gaps = 14/512 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQPP    ++ ++SD L++   A         L   G  +     +E  R AN + P+L 
Sbjct: 37  NQPPDRGDVDLWASD-LVLRDCATRAGARAAPLAAYGAALGRAETREAGRDANLHPPELC 95

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +  GG R D+V FHPA+H ++  S   G     WD +         H   AA +YL +Q
Sbjct: 96  LFDRGGRRLDEVRFHPAYHHMMDLSQSAGYAALAWDGA------PGGHATHAAMVYLASQ 149

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E GH    ++T A++ AL   P + + W PK+ +  YDP  +   +K S  +G+ +TEK
Sbjct: 150 VEPGHCCPLTMTYAAVPALAANPELAEIWRPKLTAATYDPAPRPIGEKRSATLGMAMTEK 209

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           +GG+D+ A T+   +  D  + L GHKWF S+PMSD F+ LAQ  G + CFL+PR LE  
Sbjct: 210 QGGSDVRANTTTATRDGDA-WRLRGHKWFCSAPMSDGFLTLAQAPGGLTCFLLPRWLES- 267

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +   RLK+K+GNR+NA+ E+EF +   F LGD       + +M     LD+A+   
Sbjct: 268 ERNAIHLMRLKDKLGNRANASSEVEFHDALAFQLGDEGAGVRTIIEMVHHTRLDTAMAPA 327

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR +L+EA H+   R      LIDQP+M+  +AD+ALD   A  L  R+A +FD    
Sbjct: 328 GLMRAALSEAHHWVSHRSAFQRRLIDQPLMRAVLADLALDWEGALTLGLRVARAFD--GE 385

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +E+ A+ARI   + K+   K  P V  EAME +GG GY+E+  +   YRE+P N I  G
Sbjct: 386 TAEDRAFARIGVALAKFLSNKRCPVVAVEAMEVLGGMGYVEDTPMPMLYREAPLNGIWEG 445

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARF 503
           SGN + LD+L  L +     + + + L+   G+  +    +   RD       +   AR+
Sbjct: 446 SGNVICLDILRSLARDPLAAQTVQAELDAATGADRRYDAALKAHRDRWPTLPPE-AEARW 504

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFL 535
            TE  A   +AA L R     +AD ++  R L
Sbjct: 505 FTEATAHLLTAALLLRHAPGAVADGYIATRVL 536


>gi|172059183|ref|YP_001806835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171991700|gb|ACB62619.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 550

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/518 (35%), Positives = 276/518 (53%), Gaps = 15/518 (2%)

Query: 26  NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    +  N +++D +L  AL     +     L+  G  + S     LA  AN +TP+L
Sbjct: 10  NQFDELVDYNLFATDIALRDALARAGANWAVPRLDAYGARLGSADTARLADEANRHTPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHPAWH LL    ++G   S+  R   P          AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+G+TE
Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M     L 
Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA++
Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRLADA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+   S   E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497
           NSI  GSGN M LDVL  + +  +    L + L          +  +  LR  ++   + 
Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAELADLGAGEPRIRAALDALRAMLAAPADT 483

Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +   R   +++AL + A  L R     +AD F+  R 
Sbjct: 484 LEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRL 521


>gi|167896429|ref|ZP_02483831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
          Length = 513

 Score =  276 bits (707), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 272/515 (52%), Gaps = 21/515 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L   LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRSELDALRAQLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             + L R L ++IAL + A  L  A    ++D F+
Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFI 513


>gi|167582818|ref|ZP_02375692.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 539

 Score =  276 bits (706), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 184/519 (35%), Positives = 276/519 (53%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +    + A  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L + LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALVDEL-RALGGHDARIRAELDALRALLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             + L R L ++IAL + A  L  A    +++ F+  RF
Sbjct: 479 ALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRF 517


>gi|299533428|ref|ZP_07046810.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298718634|gb|EFI59609.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 558

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 185/541 (34%), Positives = 289/541 (53%), Gaps = 36/541 (6%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71
           Q  D+    NQ     G+N   +D+ L  ++      +F   + +  + LGE        
Sbjct: 2   QALDTHDVFNQFDELTGINLLQADAALQEVLQRQQAQSFVPALKRFAQQLGEK----HNW 57

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E A +AN +TP+L  +   G   D VEFHP+WH L+      GL  S+    FE   R +
Sbjct: 58  EHAELANRHTPELQRFDARGRVQDAVEFHPSWHRLMELYRKQGL-ISL---PFESPSRGR 113

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                AA  YL  Q+E G L   ++T+A++  L   P++      ++FS EYD  +    
Sbjct: 114 -WSAWAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLD 172

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLA 247
           QK S+ IG+G+TEK+GG+D+ A T+  + + +G     Y L GHKWF S+PM DA +++A
Sbjct: 173 QKKSIWIGMGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVA 232

Query: 248 QV---EGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++    G +G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+E  + +G L+G+
Sbjct: 233 RMATPSGELGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGE 292

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD
Sbjct: 293 EGRGIPTIIEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLAD 352

Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +AL+  A+  L+  LA +++ EA+      A+ RIM P  K+W CK +  +  EAME  G
Sbjct: 353 LALESEASMQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFG 412

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--S 478
           G+GY+++  +AR +RE+P NSI  GSGN M LDVL  + +       L     QDLG  +
Sbjct: 413 GNGYVQDSIVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLL----QDLGDMA 468

Query: 479 SGKKVITILRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           + + ++T +  S++  L    + L   AR L + + L + A  L+R     +AD F+  R
Sbjct: 469 ADQPLLTAMAQSLAKRLSGSPEALEPQARRLVQDLCLLAQACLLHRHAPAHMADGFIHTR 528

Query: 534 F 534
            
Sbjct: 529 L 529


>gi|83720392|ref|YP_443790.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83654217|gb|ABC38280.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 546

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 184/519 (35%), Positives = 276/519 (53%), Gaps = 21/519 (4%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +    + A  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496
           NSI  GSGN M LDV+  + +  +    L   L + LG    ++   +  LR  +    +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALADEL-RALGGHDARIRAELDALRALLGTPPD 478

Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             + L R L ++IAL + A  L  A    +++ F+  RF
Sbjct: 479 ALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRF 517


>gi|167838409|ref|ZP_02465268.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 546

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 176/475 (37%), Positives = 260/475 (54%), Gaps = 21/475 (4%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           TAQ+ A  AN + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     
Sbjct: 55  TAQQ-AEDANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES----- 108

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           R       AA  YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP + 
Sbjct: 109 RAGRWAANAAGFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDIHDPRDA 168

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFI 244
               K S+ IG+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +
Sbjct: 169 PIDAKQSIMIGMGMTEKQGGSDVRANTTLAVPVGACGRGGEHLLRGHKWFFSAPMCDAHL 228

Query: 245 MLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+  
Sbjct: 229 VVARTEAGGPSCFYVPRWRPDGTKNAVRVQRLKNKVGNRSNSSSEVELDDAWGVMLGEEG 288

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +M     L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+A
Sbjct: 289 RGIPTIIEMATYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLA 348

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+  AA AL+ RLA +F+       E A+ RI+ P  K+W CK A     E ME  GG+G
Sbjct: 349 LESEAALALAMRLAQAFERG-----EPAWMRIVTPAAKFWVCKRAVEAAGEVMEVFGGNG 403

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+++  IAR +RE+P NSI  GSGN M LDV+  + +  +    L   L   LG    ++
Sbjct: 404 YVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGHDARI 462

Query: 484 ---ITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              +  LR  +    +  + L R   ++IAL + A  L  A    ++D F+  RF
Sbjct: 463 RAELDALRALLGTPPDALEALGRVPAQRIALVAQACLLIDAAPAAVSDGFIATRF 517


>gi|289744395|ref|ZP_06503773.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987]
 gi|289684923|gb|EFD52411.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987]
          Length = 445

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 226/409 (55%), Gaps = 4/409 (0%)

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           R  AH +RAA+  +   +E GH+   S+T A + AL     +   + P + SREYDP  K
Sbjct: 10  RPGAHVVRAAKTSVW-TVEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELK 68

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
               K  +  G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF S+PM D F++LAQ
Sbjct: 69  PATTKAGITAGMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQ 128

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               + CFL+PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       
Sbjct: 129 APDGLSCFLLPRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPT 188

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  L  LD A+ S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  A
Sbjct: 189 IIEMVNLTRLDCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEA 248

Query: 369 ATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AT ++ R+A + D A +    EA   RI     KYW CK + A  AEA+EC+GG+GY+E+
Sbjct: 249 ATIVAMRMAGATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVED 308

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVIT 485
             + R YRE+P   I  GSGN   LD L  +       E LF  L +  G   +    + 
Sbjct: 309 SGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVE 368

Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            LR  +         AR + E I LA   + L R G   +A+ FL  R 
Sbjct: 369 RLRPQLGDLDTIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 417


>gi|319760852|ref|YP_004124789.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822757|ref|YP_004386060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|317115413|gb|ADU97901.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308129|gb|AEB82544.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 553

 Score =  273 bits (699), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/476 (35%), Positives = 247/476 (51%), Gaps = 17/476 (3%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA  AN + P+L  +   G R D +EFHP WHAL+      GL    +  +         
Sbjct: 58  LAEQANRHLPELRRFDSRGRRIDALEFHPGWHALMALYRGQGLVSQPFREAR-----AGR 112

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
               AA  YL  Q+E G L   ++T A++  L   P +      +++S  YD  +     
Sbjct: 113 WAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLQKEPALWAQLQERLYSDAYDARDLPVQD 172

Query: 193 KTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K S+ +G+G+TEK+GG+D+ A     T+ G     G Y L GHKWF S+P  DA ++ A+
Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVATAVGAGGRGGEYLLRGHKWFFSAPQCDAHLVTAR 232

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V+  G   CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+     
Sbjct: 233 VQEGGPFACFYVPRWRPDGSRNAVRVQRLKDKLGNRSNASGEVEFEDAWGVLMGEEGRGI 292

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     L+    S + +R +  +AI YAR+RH  G  L +QP+M+  +AD+AL+ 
Sbjct: 293 PTIIEMAGYTRLNCVAGSAAILRQATVQAIAYARQRHAFGKALAEQPLMRAVLADLALES 352

Query: 367 AAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A+  L  RLA +F+ E      + A+ R M P  K+W CK A  +  EAME  GG+GY+
Sbjct: 353 EASLVLLMRLAEAFEREGDGDPAQRAWKRAMTPAAKFWVCKRAVELTGEAMEVFGGNGYV 412

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           E+  +AR +RE+P NSI  GSGN M LDVL  L +       L + L Q       ++  
Sbjct: 413 EDGVMARLFREAPVNSIWEGSGNVMCLDVLRALAREPGAARALLAEL-QPAAQGEPRIAA 471

Query: 486 ILRDSISL----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            L+   +L      E + L R L +++ L + A  L       +AD F+  R  D 
Sbjct: 472 ALQGLQALLAASADELEALGRVLAQRLVLVAQACLLRAHAPACVADAFIATRLGDG 527


>gi|270265008|ref|ZP_06193271.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13]
 gi|270040942|gb|EFA14043.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13]
          Length = 542

 Score =  273 bits (699), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 165/437 (37%), Positives = 235/437 (53%), Gaps = 11/437 (2%)

Query: 25  LNQPPLFIGMNAYSSDS-LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD+ L  AL           L  LG+ + +  + EL R+AN N P+
Sbjct: 9   FNQPKPLGNSNLFLSDTPLREALQREQAGWDADVLASLGQQLGTQESLELGRLANANPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G+R D V FHPAWH L++  I + +H   W        R  A   RAAR  L 
Sbjct: 69  LLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGAFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T  ++  L    P   + W   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFGAIPLLRRLLPSEFQSWLSPLLSDRYDAHLSPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+ + T+    +    S   Y L GHKWF S P SDA ++LAQ EG + CF +
Sbjct: 185 TEKQGGSDVLSNTTTATPLTARGSGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +LLG+       +  M  L   
Sbjct: 245 PRILPDGTRNAIRLERLKDKLGNRSNASSEVEFQDATAWLLGEEGDGVRHILKMGGLTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR +L+ A+++  +R   G  LI+ P+M++ +  +AL +   TA   RLA 
Sbjct: 305 DCALGSHGLMRRALSVALYHTLQRQAFGKTLIEHPMMRQVLGRMALRLEGQTAALMRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++D A    E+ A  R++ P  K+  C+     + EAME +GG GY EE  + R YRE P
Sbjct: 365 AYDSADDPLEQ-ALCRVLTPAAKFEVCRQGIPFVGEAMEALGGLGYCEESELPRLYREMP 423

Query: 439 ANSILLGSGNAMVLDVL 455
            NSI  GSGN M LDV+
Sbjct: 424 VNSIWEGSGNIMCLDVM 440


>gi|157368687|ref|YP_001476676.1| isovaleryl CoA dehydrogenase [Serratia proteamaculans 568]
 gi|157320451|gb|ABV39548.1| acyl-CoA dehydrogenase domain protein [Serratia proteamaculans 568]
          Length = 544

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 164/438 (37%), Positives = 238/438 (54%), Gaps = 11/438 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD+ L   +    +    E L  LG+ + +  + EL R+AN N P+
Sbjct: 9   FNQPKPLGNSNLFLSDTALHEAVQREQAGWDVEVLASLGQQLGTQESLELGRLANANPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G+R D V FHPAWH L++  I + +H   W        R  +   RAAR  L 
Sbjct: 69  LLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T  ++  L  + P   + W   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFGAIPLLQRSLPTEFQSWLTPLLSDRYDAHVLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+ + T+    ++       Y L GHKWF S P SDA ++LAQ +G + CF +
Sbjct: 185 TEKQGGSDVLSNTTTASPLAARGPGEAYRLVGHKWFFSVPQSDAHLVLAQADGGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +L+G+       +  M  L   
Sbjct: 245 PRILPDGTRNAIRLERLKDKLGNRSNASGEVEFQDASAWLVGEEGDGVRHILKMGGLTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR  L+ A+++A +R   G  LI+QP+M++ +A +AL +   TA   RLA 
Sbjct: 305 DCALGSQGLMRRGLSVALYHALQRQAFGKPLIEQPMMRQVLARMALRLEGQTAALMRLAR 364

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++D     +  E A  R+M P  K+  C+     I EAME +GG GY EE  + R YRE 
Sbjct: 365 AYDSIGVGAPLEQALCRVMTPAAKFEVCRQGIPFIGEAMEALGGIGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVL 455
           P NSI  GSGN M LDV+
Sbjct: 425 PVNSIWEGSGNIMCLDVM 442


>gi|319407286|emb|CBI80927.1| acyl-CoA dehydrogenase [Bartonella sp. 1-1C]
          Length = 542

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/537 (31%), Positives = 289/537 (53%), Gaps = 22/537 (4%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + PQLH      +  
Sbjct: 13  NAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSHRPQLHYNNRWKQSK 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           ++++ HP++H L R S   GL  S+W+  + E  VR QA   RA RL L+A LE GHL  
Sbjct: 73  EELDIHPSYHTLQRYSRQAGLVSSLWESATSENGVRYQA---RAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT--------EK 205
            +V SA++  L+    + K W   + SR+YD ++K    K    IG  LT         +
Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNK----IGASLTCAFDNIEESE 185

Query: 206 RGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +   +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PRL E
Sbjct: 186 KYTFNFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQE 245

Query: 264 DGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +G  NG    R L  + G  S     +EF    G+LLG++      ++D++ ++  D AI
Sbjct: 246 NGLLNGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAI 305

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S   +R +L  +I + R++  +       P+ +R  ADIALDIAA+ AL  RLA +FD 
Sbjct: 306 ISAGVLRSALQLSIDFLRKKMPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDN 362

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A     EAA+ARIM PI      ++   ++ E +  +G   + +   + +  R+SPA  +
Sbjct: 363 AVDNRSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIV 422

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
                N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  R
Sbjct: 423 KNSGMNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGR 482

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           F  E++A AS++AAL    +  I + ++E+R      S++ ML  R+N   ++D LY
Sbjct: 483 FFVEQMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539


>gi|84687411|ref|ZP_01015289.1| putative acyl-CoA dehydrogenase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664569|gb|EAQ11055.1| putative acyl-CoA dehydrogenase [Rhodobacterales bacterium
           HTCC2654]
          Length = 537

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 251/459 (54%), Gaps = 13/459 (2%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A  N P+L  +   G R D+V FHP +H +++  +  G     WD +         H   
Sbjct: 66  ARANPPELKLFDRAGRRLDEVHFHPGYHEVMQAGMAAGYAALAWDGA------PGGHATH 119

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA +Y+++Q+E G     ++T A++ AL   P +   WAPK+   EYDP+     +K + 
Sbjct: 120 AAMVYMLSQVEPGICCPLTMTYAAVPALAADPALEAVWAPKLTGTEYDPSIAPVGRKRAA 179

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            +G+ +TEK+GG+D+ A T++ +  + G++ L+GHKWF S+PMSD F+ LA  E  + CF
Sbjct: 180 TMGMAMTEKQGGSDVRANTTRAEP-AGGMWRLTGHKWFCSAPMSDGFLTLAYTEAGLTCF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR  ++G  N +  QRLK+K+GNR+NA+ E+E+       LG+       + +M    
Sbjct: 239 LVPRWTDEGR-NPIQIQRLKDKLGNRANASSEIEYHGALAHKLGEDGRGVATIIEMVHHT 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD+A+     MR +L EA H+   R      LIDQP+M+  +AD+AL+   A AL  R 
Sbjct: 298 RLDTAMAPAGLMRAALVEAKHWVEGRSAFQKRLIDQPLMRSVLADLALEWEGALALGMRA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +FD      E+ A+ARI   + K+   K    VI EAMEC+GG GY+EE  +   YRE
Sbjct: 358 ARAFD--GDAPEDRAFARISVALAKFLSNKRCGPVILEAMECLGGMGYVEETPMPMLYRE 415

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P NSI  GSGN + LD+L  L +       L + LE   G+  +    +    D     
Sbjct: 416 APLNSIWEGSGNVICLDILRTLAREPMAGAALRAELEAATGADRRYDAALAAHFDRWPAL 475

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
            E+ G AR+  E++A+  +A+ L RAG   ++D ++  +
Sbjct: 476 PEE-GEARWFAERLAVLLAASVLLRAGNAAVSDGWIATK 513


>gi|319404281|emb|CBI77874.1| acyl-CoA dehydrogenase [Bartonella rochalimae ATCC BAA-1498]
          Length = 542

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/533 (31%), Positives = 288/533 (54%), Gaps = 14/533 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + P+LH      +  
Sbjct: 13  NAFLSDTLMFRIASTLPTSLLASFEEIGTFVASDEAWDLARLANSHRPRLHYNNRWKQSK 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           ++++ HP++H L R S   GL  S+W+  + E  VR QA   RA RL L+A LE GHL  
Sbjct: 73  EELDIHPSYHNLQRYSRQAGLVSSLWESATSENGVRYQA---RAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
            +V SA++  L+    + K W   + SR+YD ++K    KT  ++          ++   
Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNKTGASLTCAFDNIEESEKYTF 189

Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PRL E+G  
Sbjct: 190 NFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQENGLL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG    R L  + G  S     +EF    G+LLG++      ++D++ ++  D AI+S  
Sbjct: 250 NGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAIISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  +I + R++  +       P+ +R  ADIALDIAA+ AL  RLA +FD A   
Sbjct: 310 VLRSALQFSIDFLRKKMPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAVDN 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI      ++   ++ E +  +G   + +   + +  R+SPA  +    
Sbjct: 367 RSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIVKNSG 426

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF  E
Sbjct: 427 MNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGRFFVE 486

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A AS++AAL    +  I + ++E+R      S++ ML  R+N   ++D LY
Sbjct: 487 QMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539


>gi|319405724|emb|CBI79347.1| acyl-CoA dehydrogenase [Bartonella sp. AR 15-3]
          Length = 542

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/533 (30%), Positives = 289/533 (54%), Gaps = 14/533 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + P LH      +  
Sbjct: 13  NAFLSDTLMFRIASTLPTSLLPSFEEIGAFVASDEAWDLARLANSHRPTLHYNNRWRQSK 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSF-EPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           ++++ HP++H L R S   GL  S+W+ +  E  VR QA   RA RL L+A LE GHL  
Sbjct: 73  EELDIHPSYHTLQRYSRQAGLVSSLWENTTSENGVRYQA---RAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
            +V SA++  L+    + K W   + SR+YD ++++   K   ++          ++   
Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSRSIENKRGASLTCAFDNIEESEKYTF 189

Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PR+ E+G  
Sbjct: 190 NFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRIQENGLL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG+   R L  + G  S     +EF   +G+L+G++      ++D++ ++  D AI+S  
Sbjct: 250 NGVILTRYLIQRSGEYSAPEGVIEFRGCYGWLVGNIGEGAKVIKDIETMMRFDQAIISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  +I + R++  +       P+ +R  ADIALDIAA+ AL  RLA +FD A   
Sbjct: 310 VLRSALQFSIDFLRKQTPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAADN 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI      ++   +I E +  +G   + +   + +  R+SPA  +    
Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIIGEIIAQVGIVSFTDSNPLLQILRDSPARIVKNSG 426

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF  E
Sbjct: 427 VNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASVNEGAGRFFVE 486

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A AS++AAL    +  + + ++E+R      S++ ML  R++   ++D LY
Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYSPTQLLDVLY 539


>gi|149913850|ref|ZP_01902382.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
 gi|149812134|gb|EDM71965.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
          Length = 543

 Score =  270 bits (689), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 165/468 (35%), Positives = 248/468 (52%), Gaps = 17/468 (3%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE    AN + P+L A+  GG R D+V +HP +H LL   +  G     W+         
Sbjct: 61  QEAGIQANRHPPELLAFDAGGRRLDEVRYHPDYHRLLETGLSAGYAAIPWEGG------A 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             H   AA +YL  Q+E G     ++T A++ AL     +   W PK+ +R YD   +  
Sbjct: 115 GGHATHAAMVYLTTQIEPGVCCPMTMTYAAVPALKADADLFAAWVPKLIARAYDGAVRPM 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV 249
            +K  + +G+ +TEK+GG+D+ A  ++   + DG  + L+GHKWF S+PMSD F+ LAQ 
Sbjct: 175 ARKPGLTMGMAMTEKQGGSDLRATVTR--AVPDGDAHRLTGHKWFCSAPMSDGFLTLAQA 232

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G + CF+VPR L+ G  N +  QRLK+K+GNR+NA+ E+E+     + LG        +
Sbjct: 233 PGGLTCFVVPRWLDHGR-NAIRLQRLKDKLGNRANASAEIEYDGALAYRLGPEGEGIRTI 291

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     LD+A+     MR +L  A H+AR R      LIDQP+M+  +AD+ALD    
Sbjct: 292 IEMVHHARLDTAMAPAGLMRAALDRAAHWARHRSAFDARLIDQPLMRAVLADLALDWEGT 351

Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            AL  R+A +FD   S SE E A+AR+   + KY   K+ P ++ EAME IGG+GY+E+ 
Sbjct: 352 LALGLRVARAFD---SPSEPERAFARLAVALAKYLGNKLCPGLVYEAMEAIGGAGYVEDS 408

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +   YRE+P N I  GSGN + LD+L  L +     E L + L    G   ++    LR
Sbjct: 409 GLPLFYREAPLNGIWEGSGNVICLDILRTLRRAPLAGEVLSAELGAVSGQY-RRYDAALR 467

Query: 489 DSISLCKE--DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +    +  D   AR+  E +    +A+ L +     IA+ ++  R 
Sbjct: 468 AHMDRFPKLPDPREARWYAESLGSLLTASVLMQNAPPAIAEAYIATRL 515


>gi|329890652|ref|ZP_08268995.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845953|gb|EGF95517.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 538

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 168/457 (36%), Positives = 242/457 (52%), Gaps = 15/457 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P    ++ ++ D  L   + ++    H E L  LG    S    +    AN   P L
Sbjct: 17  NQVPPLEDVDLFTGDRALHDAVRHWGGAGHVERLSDLGRRCGSAEVIDWGVQANRVPPVL 76

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G R D+V FHPA+H L+   +  G+    WD +         H + AA L+L  
Sbjct: 77  DTHDRYGRRIDEVTFHPAYHQLMDLGLGAGIAAGAWDGT------PNGHLLHAAILFLTG 130

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q ++G     ++T AS+ AL   P V + W   + S  YDP  +   +K  V IG+ +TE
Sbjct: 131 QADSGTSCPMTMTYASVAALQADPAVGEPWIGGVLSGRYDPAVRPASEKAGVTIGMAMTE 190

Query: 205 KRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           K+GG+D+ A T++ + I  DG Y L+GHKWF S+PM DAF+ LA   G + CF++PR L 
Sbjct: 191 KQGGSDVRANTTRAEPIGEDGWYSLTGHKWFCSAPMCDAFLTLAYAPGGLTCFILPRWLP 250

Query: 264 DGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           DG+ N G    RLK+K+G+RSNA+ E+E+       LG+       +  M     LD  +
Sbjct: 251 DGTRNAGFRVMRLKDKMGDRSNASSEVEYHGALAQRLGEEGRGVATIIRMVQHTRLDCVV 310

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR +LA+A  +A  R      LIDQP+M   + D+A++  AATALS RLA +FD 
Sbjct: 311 GSALQMRGALAQAAWHAAHRTAFQKRLIDQPMMAAVLTDLAVESEAATALSMRLAATFDA 370

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 + A  R++ P+ KYW CK AP ++ EAME +GG+GY+E   + R +R+SP N+I
Sbjct: 371 ------DDAVGRLLTPVAKYWVCKRAPNLVYEAMEALGGAGYVETGPMPRLFRQSPLNAI 424

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             GSGN + LDVL    +     E L   L    G S
Sbjct: 425 WEGSGNVIALDVLRAAGREPEAVEALRDWLASQAGKS 461


>gi|326315001|ref|YP_004232673.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323371837|gb|ADX44106.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 555

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 183/496 (36%), Positives = 261/496 (52%), Gaps = 24/496 (4%)

Query: 58  LELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           L  LGEY     S   Q LA++AN +TP LH +   G R D+VEFHPAW AL+      G
Sbjct: 40  LPALGEYARRLGSAETQALAQLANRHTPTLHRFDSRGRRIDRVEFHPAWDALMALYRGQG 99

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L    +D               AA  YL  Q+E G L   ++T A++  L   P +    
Sbjct: 100 LVSMPFDSDR-----AGRWAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWAQL 154

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSG 230
             ++ SR +DP      +K  + +G+G+TEK+GG+D+ A T+     G     G Y L G
Sbjct: 155 GDRLHSRTHDPRELPAHEKAGIWLGMGMTEKQGGSDVRANTTVAMPLGAGGRGGEYRLRG 214

Query: 231 HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           HKWF S+P SDA +++A+    G   CF VPR L DG+ NG+  QRLK+K+GNRSNA+ E
Sbjct: 215 HKWFFSTPQSDAHLVVARTGEGGPFACFYVPRRLPDGTLNGVHVQRLKDKVGNRSNASGE 274

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           +EF + +G L+G+       + +M     L+    S + +R +  +AI YARRRH  G  
Sbjct: 275 VEFDDAWGVLMGEEGRGIPTIIEMATYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKA 334

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCC 405
           L  QP+M+  +AD+AL+  AA AL  RLA +F   D   +   + A+ R+M P  K+W C
Sbjct: 335 LAAQPLMRTVLADLALESEAALALLMRLAEAFERDDGGTASPADRAWKRVMTPAAKFWVC 394

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           K    +  EAME  GG+GY++E  +AR + E+P NSI  GSGN M LDVL  L +     
Sbjct: 395 KRGVEMSGEAMEVFGGNGYVQEGVMARLFLEAPVNSIWEGSGNVMCLDVLRALARDPEAA 454

Query: 466 EQLFSTLEQDLGSSGKKVITI-LRDSISLCKED----KGLARFLTEKIALASSAAALYRA 520
             L   L     + G+  I + LR+  +L        + L R L +++ L + A  L R 
Sbjct: 455 HALLEELAP--AAQGEPRIAVALRELQALLARPPEALEALGRLLVQRLVLLAQACLLRRH 512

Query: 521 GMNDIADVFLENRFLD 536
               +AD F+  R  D
Sbjct: 513 APAAVADAFIATRLSD 528


>gi|167564599|ref|ZP_02357515.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 471

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 173/461 (37%), Positives = 254/461 (55%), Gaps = 21/461 (4%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           TAQ+ A  AN + P+L+A+   G R D+V+FHP+WHALL      GL  S+  R      
Sbjct: 21  TAQQ-AEDANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYRGQGL-ISLAFRD----A 74

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           R       AA  YL  Q+EAG L   ++T A +  L   P +      K++S  +DP + 
Sbjct: 75  RAGRWAANAAGFYLHGQIEAGTLCPATMTQAGIPVLQKEPALWAQLKDKLYSDVHDPRDV 134

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFI 244
               K S+ +G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +
Sbjct: 135 PIDAKQSITLGMGMTEKQGGSDVRANTTVAAPVGAGGRGGDYLLRGHKWFFSAPMCDAHL 194

Query: 245 MLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+  
Sbjct: 195 IVARTESGGPSCFYVPRWRPDGTKNAVLIQRLKNKVGNRSNSSSEVELDDAWGVMLGEEG 254

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +M     L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+A
Sbjct: 255 RGIPTIIEMANYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLA 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+  AA AL+ RLA +F+       E A+ RI+ P  K+W CK A     E ME  GG+G
Sbjct: 315 LESEAALALAMRLAQAFERG-----EPAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNG 369

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+++  IAR +RE+P NSI  GSGN M LDV+  + +  +    L   L   LG    ++
Sbjct: 370 YVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGRDARI 428

Query: 484 ---ITILRDSISLCKEDK-GLARFLTEKIALASSAAALYRA 520
              +  LR  +    + +  L R L ++IAL + A  L  A
Sbjct: 429 RAELDALRALLGTPPDAREALGRVLAQRIALVAQACLLLDA 469


>gi|167721801|ref|ZP_02405037.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
          Length = 471

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           NSI  GSGN M LDV+  + +  +    L   L
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 452


>gi|167913110|ref|ZP_02500201.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
          Length = 475

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 3   NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 62

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 63  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 117

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 118 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 177

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 178 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 238 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 298 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 357

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 358 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 412

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           NSI  GSGN M LDV+  + +  +    L   L
Sbjct: 413 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 445


>gi|167817992|ref|ZP_02449672.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
          Length = 469

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+     G     G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       E A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           NSI  GSGN M LDV+  + +  +    L   L
Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 452


>gi|167620959|ref|ZP_02389590.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 477

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/441 (37%), Positives = 243/441 (55%), Gaps = 16/441 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +    + A  AN + P+L
Sbjct: 10  NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 70  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184

Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
           NSI  GSGN M LDV+  + +
Sbjct: 420 NSIWEGSGNVMCLDVMRAISR 440


>gi|312115085|ref|YP_004012681.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220214|gb|ADP71582.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 549

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/458 (37%), Positives = 250/458 (54%), Gaps = 12/458 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           D+    N PP F G+N Y +D +L  A   +    V   L  LG    S  A +    AN
Sbjct: 11  DTHDVTNMPPPFGGLNLYETDIALKEAAGLHGGEWVDGPLSALGAAAGSDEALQAGEDAN 70

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L  +   G R D+V FHPA+H  +  ++   +H   W        R  AH   AA
Sbjct: 71  RYLPELRTFDRFGGRIDEVRFHPAYHQCMALAMEHRIHSIGWREK-----RPGAHVAHAA 125

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L + +Q EAG +   S+T AS+ AL   P V   W PKI    Y+   +   +K  V I
Sbjct: 126 ALAIGSQAEAGTMCPMSMTYASVAALRKQPDVAAAWLPKIVDGVYEAPLRPIAEKRGVTI 185

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+ +TEK+GG+D+ + +++   +  G     Y L+GHKWF S+PMSDAF+ LA  +  + 
Sbjct: 186 GMFMTEKQGGSDVRSNSTRAVPVGAGGPGGEYLLTGHKWFCSAPMSDAFLTLAYTDRGLS 245

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL PR+  D + N +   RLK K+GNRSNA+ E E+ +TF +++G+       + DM  
Sbjct: 246 CFLAPRIKPDSTRNSMNLMRLKEKLGNRSNASAEFEYKDTFAWMIGEDGRGVATIMDMVH 305

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD+   S+  MR +LAEA H+AR R      LIDQPVM+  +AD+ALD  AA   + 
Sbjct: 306 HTRLDTTAGSLGIMRRALAEAAHHARHRRAFQKTLIDQPVMRAVLADLALDYEAAAMFTM 365

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A ++D   +  EE  +AR+   + K++  K     +AE MEC+GG GYIEE + AR+Y
Sbjct: 366 RIARAYD--GTTPEERGFARLGVALGKFYIAKRTAPFVAECMECLGGGGYIEEAATARYY 423

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           RE+P N+I  GSGN + LD+L  L+K     + L + L
Sbjct: 424 REAPVNAIWEGSGNVIALDILRTLQKEPLALDGLLAEL 461


>gi|49474242|ref|YP_032284.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse]
 gi|49239746|emb|CAF26128.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse]
          Length = 598

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 300/562 (53%), Gaps = 18/562 (3%)

Query: 6   IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYV 65
           +Y    +N  + P  ++FA N        NA+ SD+L+  + +  P+ +    E +G++V
Sbjct: 44  VYDMNNLNNRNMPMSAVFAQNVRR----KNAFLSDTLMFRIASTLPTFLLASFEEIGDFV 99

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF- 124
            S  A EL+ +AN   P L      G   +K+E H ++ AL + +   GL  S+W+ +  
Sbjct: 100 ASREAWELSYLANRYRPVLRYNNEWGRPTEKLEIHSSYQALQQYARQIGLVTSLWENTTS 159

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           E  VR QA   RA RL L A LE GHL    +TSA +  L++   + K W   + SR+YD
Sbjct: 160 ENGVRYQA---RAIRLALSASLETGHLNEIVITSAVIAVLISDIELFKKWQNVLLSRQYD 216

Query: 185 PTNKAPMQKTSVAIGLGLTE----KRGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSP 238
            ++K   +K + ++     +    ++   +   +   S  +K+   +Y L+  K  + +P
Sbjct: 217 LSSKPVNRKKAASLTCAFDDVEKYEKHSFNFQNVKKISFDEKMGRDLYRLNVVKTNVINP 276

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGF 297
           + D +++ A+++G + CF VPR+ E+G+ NG +  + L  + G  S     ++F  ++G+
Sbjct: 277 IVDGYLVSAELDGHLSCFFVPRMQENGTLNGSISIRHLVQRSGEVSAPEGVVDFQGSYGW 336

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG+       ++D++ ++  D +++S   +R +L   I + R++  +  +    P+ +R
Sbjct: 337 LLGNAGEGLKVIKDIETMMRFDQSVISAGVLRAALQFGIDFFRQKMPNQPL---PPLTER 393

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             ADIALDIAA+  L  RLA +FD A +   EAA+ARIM PI  Y   ++A  +I E + 
Sbjct: 394 IFADIALDIAASQVLVLRLARAFDNAANDHSEAAFARIMTPIIAYHVSQLAVPIIGEIIA 453

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
            +G   +IE   +++     PA  I   S N +V D + + EK   LF++L   +  D+G
Sbjct: 454 QVGIESFIEGNPLSQILCNGPARIIRNTSANQLVKDAILIAEKAPGLFQKLLEKIAIDIG 513

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            +G + + I+R ++ +   ++G  RF  E++A A++AA+L    +  +A+ ++E+R    
Sbjct: 514 PAGPRAVEIIRSAVEMASANEGAGRFFIEQVAYAAAAASLRSTKIEHVANAYMESRLGGQ 573

Query: 538 CHSTHCMLHGRFNAAHIIDSLY 559
             S++ ML  R+NA H+++ LY
Sbjct: 574 WRSSYGMLIARYNAGHLLNVLY 595


>gi|319408538|emb|CBI82191.1| acyl-CoA dehydrogenase [Bartonella schoenbuchensis R1]
          Length = 541

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 286/532 (53%), Gaps = 13/532 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +N P+ +    E +G +V S  A++L+R+AN++ P L       +  
Sbjct: 13  NAFLSDTLMFRIASNLPASLLASFEEIGAFVASHEARDLSRLANHHRPILRYNTEWSQLT 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +++E HPA+  L R S   GL  S+W+  + E  +R QA   RA RL L A LE GHL  
Sbjct: 73  EQLEIHPAYDTLQRYSRQVGLSTSLWENIASESGIRYQA---RAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----GLGLTEKRGG 208
             +TSA++  L+   ++ K W   + SR+YD + K    K   ++      +  +EK   
Sbjct: 130 VIITSAAIAVLIGDIKLFKRWRNVLLSRQYDSSLKPIDDKKGASLTCAFDNVAKSEKYPS 189

Query: 209 T-DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  IA   S  +K+   +Y L+  K  + +P++D +++ A+++G + CFLVPR+ E+G+ 
Sbjct: 190 SFPIAQKVSFDEKMGRDLYHLNSVKTNVINPVADGYLVSAEIDGHLSCFLVPRVQENGAI 249

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    L  + G  S     + F  ++G+LLG++      ++D++ +   D +++S   
Sbjct: 250 NNISIHYLLQRSGEYSVPEGVVHFQGSYGWLLGNIGEGAKIIKDIETMTRFDQSVISTGV 309

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R +L   I + R++  +  +    P+ +R  ADIALDIAA+ AL  RLA +FD A +  
Sbjct: 310 LRAALQFGIDFFRQKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNATNSR 366

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA+ARIM PI      ++   +++E +  +G   ++E   +++   +  A  +     
Sbjct: 367 AEAAFARIMTPIIACHVNQLVVPIVSEIIAQLGLESFVEGNPLSQMLHDGSARIVRNNDS 426

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           N +V D + +  K   LF+QL   +  ++GS+G + + I++ +I +   ++G  RF  E+
Sbjct: 427 NQLVRDAILIANKAPGLFQQLLEKIATNIGSAGPRAVEIIKSAIHMASTNEGAGRFFVEQ 486

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           +A A++ A+L    M  I + ++E+R       ++ M+  R+N   +++ LY
Sbjct: 487 VAYAAATASLRYKEMEYIVNAYMESRLGGQWRLSYGMMIARYNPGQLLEILY 538


>gi|333007687|gb|EGK27164.1| protein aidB [Shigella flexneri VA-6]
          Length = 405

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 210/374 (56%), Gaps = 1/374 (0%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A+ + L   P   +DW   + S  YD       QK  + IG+G+TEK+GG+D+ + T +
Sbjct: 4   AATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTIR 63

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +++ DG Y L GHKWF S P SDA ++LAQ  G + CF VPR L DG  N +  +RLK+
Sbjct: 64  AERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLERLKD 123

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+GNRSNA+ E+EF +  G+LLG        +  M  +   D A+ S + MR + + AI+
Sbjct: 124 KLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIY 183

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA ++D  ++ ++EA +AR+  
Sbjct: 184 HAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDR-RADAKEALWARLFT 242

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI  GSGN M LDVL +
Sbjct: 243 PAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRV 302

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
           L K   +++ L     +  G        + R    L K  + L R +T ++ L    A +
Sbjct: 303 LNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQM 362

Query: 518 YRAGMNDIADVFLE 531
            +     +A  + +
Sbjct: 363 LKYASPPMAQAWCQ 376


>gi|254465120|ref|ZP_05078531.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium
           Y4I]
 gi|206686028|gb|EDZ46510.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium
           Y4I]
          Length = 544

 Score =  257 bits (656), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 265/511 (51%), Gaps = 14/511 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQP    G + ++ D+ L +  A+    +   L L G    S T  E A  A  + P+L 
Sbjct: 20  NQPQPRGGRDLWAEDAALRSYAAHHGGRM-DALALAGAEYGSETLLEAAAEARRDPPRLE 78

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+V F+  +H ++  +   G   + WD +         H   AA +Y++ Q
Sbjct: 79  LFSRSGRRLDEVRFNAGYHQVMAAAQRLGYAHAAWDGA------PGGHVTHAAHVYMLNQ 132

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E G     ++T A++ AL   P +   W PK+ S EYDP  +    K    +G+ +TEK
Sbjct: 133 VEPGVCCPMTMTYAAIPALRHAPDLAALWHPKLLSAEYDPAVRPVAHKRGATLGMAMTEK 192

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +GG+D+ A T++   + DG  Y L+GHKWF S+PMSD F+ LA  EG + CFLVPR LE+
Sbjct: 193 QGGSDVRANTTR--AVRDGAHYRLTGHKWFCSAPMSDGFLTLAYAEGGLTCFLVPRWLEE 250

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  NG+  QRLK+K+GNR+NA+ E+E++    + +G+       + +M     LD+A+  
Sbjct: 251 GR-NGIRLQRLKDKLGNRANASSEIEYAEALAYRVGEEGAGVRTIIEMVHHTRLDTALAP 309

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR +LAEA  +A  R     +LI QP+M+  +AD+ LD   A A    +A +FD  +
Sbjct: 310 AGLMRAALAEAFWWAEERAAFQRMLIGQPLMRAVLADLVLDAEGALAAGMAMAAAFD--R 367

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + ++  A ARI   + KY   K    VI EAME +GG GY+EE  +   YRE+P N I  
Sbjct: 368 TDADSRALARIGVALAKYLGNKRCIPVIGEAMEVLGGMGYVEETPMPMLYREAPLNGIWE 427

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGLARF 503
           GSGN + LD+L  L++       L + L+   G   +    +           D+  AR+
Sbjct: 428 GSGNVICLDILRTLDREPRAAAALNALLDGARGGDRRYDAGLAAHRARWPGLPDEAEARW 487

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534
             E +A   +AA L  A    +A+ ++ +R 
Sbjct: 488 FAESLATLMTAACLLDAAPAAVAEGYVTSRI 518


>gi|326403007|ref|YP_004283088.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325049868|dbj|BAJ80206.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 547

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/436 (38%), Positives = 243/436 (55%), Gaps = 10/436 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            +PP     +A++ D+ L+  ++ F +      L  +G  + S   + LAR AN N P+L
Sbjct: 12  GEPP---AHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANRNPPEL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+   G R D+V FHPAWH L+     D  H   W    EP  R  AH  RAA  YL  
Sbjct: 69  AAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWT---EP--RPGAHVARAAVAYLWG 123

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T A+  AL   P +   +  +I +  YDP    P +K ++ + + +TE
Sbjct: 124 QGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKPALGVAMAMTE 183

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+    +   +  D  + L+GHKWF S P SD F+ LA+    + CFL     +D
Sbjct: 184 KQGGSDLRQTRTTATRAGDS-WRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQGWRDD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N +  QRLK+K+GNRSNA+ E+EF      ++G        + +M  L  L+ A+ +
Sbjct: 243 GSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLECALGA 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR + + A+H+A  R      LIDQP+M+  +AD+AL+  AA  L+ R A + D A 
Sbjct: 303 AALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAATDAAA 362

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE  IAR YRE+P N +  
Sbjct: 363 RNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPLNGVWE 422

Query: 445 GSGNAMVLDVLNLLEK 460
           G+GN + LDVL  L +
Sbjct: 423 GAGNVICLDVLRALTR 438


>gi|163868298|ref|YP_001609507.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476]
 gi|161017954|emb|CAK01512.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476]
          Length = 539

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 282/530 (53%), Gaps = 11/530 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           N + SD+L+  + +  P  +    E +G++  S  A  L+  AN+  P L      G++ 
Sbjct: 13  NTFLSDTLMFRIASTLPKSLLASFEEIGDFAASQEAWNLSCSANHYKPLLRYNDKWGKQA 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +K+E H ++  L + S   GL  S+W+  S E  VR QA   RA RL L A LE GHL  
Sbjct: 73  EKLEIHSSYQDLQQYSRRAGLVTSLWENTSLENGVRYQA---RAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT-DIA 212
            ++TSA++  L++   + K W   + SR+YD +++    K S ++     +    T +  
Sbjct: 130 VTITSAAIAVLISDSELFKKWQNVLLSRQYDSSSRPIHHKNSASLTCAFDDIEQHTFNFP 189

Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           ++   S  + +   +Y L+  K  + +P +D +++ A + G + CF VPR+ E+G+ NG 
Sbjct: 190 SVKKISFDENMQRDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFVPRIQENGAFNGF 249

Query: 271 CYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              R L  + G        ++F   +G+LLG+       ++D++ ++  D +++S   +R
Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGCYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   I + R++  +  +    P+ +R  ADIALDIAA+ AL  RLA +FD A +   E
Sbjct: 310 AALQFGIDFFRKKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA+ARIM PI  Y   ++   +I E +  +G   +IE   +++     PA ++   S N 
Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARTVRNSSANQ 426

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +V D + + EK   LF++L   +  D+G +G + I I++ +  +   ++G  RF  E++A
Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            A++AA+L+   +  +A+ ++E+R      S++ ML  R+NA H+++ LY
Sbjct: 487 YAAAAASLHSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536


>gi|148260040|ref|YP_001234167.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146401721|gb|ABQ30248.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 547

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/436 (38%), Positives = 243/436 (55%), Gaps = 10/436 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            +PP     +A++ D+ L+  ++ F +      L  +G  + S   + LAR AN N P+L
Sbjct: 12  GEPP---AHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANRNPPEL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A+   G R D+V FHPAWH L+     D  H   W    EP  R  AH  RAA  YL  
Sbjct: 69  AAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWT---EP--RPGAHVARAAVAYLWG 123

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E G     ++T A+  AL   P +   +  +I +  YDP    P +K+++ + + +TE
Sbjct: 124 QGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKSALGVAMAMTE 183

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           K+GG+D+    +      D  + L+GHKWF S P SD F+ LA+    + CFL     +D
Sbjct: 184 KQGGSDLRQTRTTATHAGDS-WRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQGWRDD 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GS N +  QRLK+K+GNRSNA+ E+EF      ++G        + +M  L  L+ A+ +
Sbjct: 243 GSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLECALGA 302

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + MR + + A+H+A  R      LIDQP+M+  +AD+AL+  AA  L+ R A + D A 
Sbjct: 303 AALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAATDAAA 362

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE  IAR YRE+P N +  
Sbjct: 363 HNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPLNGVWE 422

Query: 445 GSGNAMVLDVLNLLEK 460
           G+GN + LDVL  L +
Sbjct: 423 GAGNVICLDVLRALTR 438


>gi|258654546|ref|YP_003203702.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258557771|gb|ACV80713.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 542

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/390 (38%), Positives = 218/390 (55%), Gaps = 7/390 (1%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E AR+A+ N P LH +   G R D++E+HP+WH L+ R++  GL  + W     P     
Sbjct: 55  EQARLADRNPPVLHTHDRAGRRVDEIEYHPSWHRLMGRAVGAGLQAAPW----APDAGAH 110

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AH  RAA  YL  Q E+GHL   S+T A++ AL     + +++ P + S EYD   +   
Sbjct: 111 AHLHRAAGFYLWTQTESGHLCPISMTYAAVPALRHDADLAREFEPGLCSPEYDFGLRPAA 170

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            K  +  G+ +TEK+GG+D+ A T++     D G Y L+GHKWF S+PM+D F+ LAQ  
Sbjct: 171 AKRGLLAGMSMTEKQGGSDVRAATTRAVPEGDAGHYRLTGHKWFTSAPMNDLFLTLAQAP 230

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF+VPR+L DG  N +   RLK+K+GNRSNA+ E+E+       LG+       + 
Sbjct: 231 GGLSCFVVPRVLPDGQRNAVSVLRLKDKLGNRSNASGEIEYDGALARRLGEEGRGVPTIL 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M  +  LD  + S   +R  L++A +YA  R   G  LI+   M   +AD+A++  AAT
Sbjct: 291 EMVTMTRLDCVLGSAGQIRAGLSQAAYYAAHRRAFGRRLIEHEAMAAVLADLAVESWAAT 350

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RLA+  D+    +       + A   K+W CK A  V+AEA+EC+GG+GY+E    
Sbjct: 351 LTGLRLADLVDDRSPAAATLLRLALPA--AKFWICKRAVPVLAEALECLGGNGYVETFPT 408

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           AR  RE+P N I  GSG    LD +  L +
Sbjct: 409 ARLLREAPLNGIWEGSGTVTALDAVRALGR 438


>gi|284044149|ref|YP_003394489.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283948370|gb|ADB51114.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 545

 Score =  253 bits (645), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 177/528 (33%), Positives = 257/528 (48%), Gaps = 43/528 (8%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSV--VHKELELLGEYVLSCTAQELARMANYNTP 82
           LNQ P  + ++ +S+D+ L   +        V +  E+ G  V S  A E  R A  N P
Sbjct: 14  LNQAPPLLPLDLFSTDAPLREALEREGGAWGVDRAREV-GTIVGSVEAHEHGRRAERNEP 72

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  +   G R D VE  P+WH LLR +I   +H   W        R  AH +RAA + L
Sbjct: 73  RLMTHDRYGNRIDAVELDPSWHWLLRGAIEREIHALPWREQ-----RDGAHAVRAALMML 127

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                 G L   S+T A++ AL       +D AP+I + E++P    P  +     G+ +
Sbjct: 128 WGNANGGVLCPVSMTYAAIPAL-------RDGAPEI-AVEWEPRLTLPDYERGALAGMAM 179

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GG+D+ A  ++ +   DG Y L GHKWF S P  D F++LAQ  G + CF V R  
Sbjct: 180 TEKQGGSDVRANITRAEPAGDGEYELWGHKWFCSYPPCDVFLVLAQAPGGLSCFFVER-- 237

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
               P G+ +QRLK+K+G RS  + E+EF      L+G+       +  M     LD  +
Sbjct: 238 ---GP-GMEFQRLKDKLGTRSLPSSEVEFRGLRARLVGEEGRGVPAIIRMVNHTRLDCLL 293

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S + MR  + EA H+AR R   G  L+DQP M+  +AD+A++  AATA + R+A SFDE
Sbjct: 294 GSATAMRRGVVEAFHHARHRSAFGAKLVDQPAMRNVLADLAIESEAATAAALRVARSFDE 353

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++  + R    + KYW CK APA  +EA+EC+GG+G++E+  +   YR++P  SI
Sbjct: 354 -----DDVPFRRFATAVMKYWVCKRAPAHASEALECLGGNGFVEDSGMPLLYRDAPLMSI 408

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKEDKG 499
             GSGN   LDVL  L K       L +      G   +    +  + RD   L  +   
Sbjct: 409 WEGSGNVAALDVLRALVKEPEGLPALLAECHLADGGDARLDAHLARVERDVAGLLGDAGA 468

Query: 500 L-------------ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                         AR + E +  A  A+ L R     +AD F   R 
Sbjct: 469 AADPAAALADAQFRARRIVEDLGTALQASLLVRNAPVAVADAFCAGRL 516


>gi|308188260|ref|YP_003932391.1| acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1]
 gi|308058770|gb|ADO10942.1| Putative acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1]
          Length = 433

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 225/404 (55%), Gaps = 11/404 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD+ L   ++   +    E L  +G  + S  + EL R+AN   P+
Sbjct: 9   FNQPHPLSNSNLFLSDTPLGEALSREGAGWDGEWLASVGRQLGSAESLELGRLANAEPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y   G R D+V FHPAWH L++      LH    + S++P VR+QA   RAAR  L 
Sbjct: 69  LLRYDARGVRLDEVRFHPAWHLLMQGVCASRLH----NLSWQPTVREQASVARAARFILH 124

Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ++AG L   ++T A++  L    P   + W   + S  YD   +   QK  + IG+G+
Sbjct: 125 AQVDAGTLCPVTMTHAAIPLLQAYLPAAFESWLDPLLSDRYDTHAQPGDQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TEK+GG+D+   T++    G +     + L+GHKWF S+P SDA ++LAQ    + CF +
Sbjct: 185 TEKQGGSDLLTSTTRAEPLGARGPGEAWRLTGHKWFFSAPQSDAHLVLAQTPEGLSCFFL 244

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PRLL DGS N +  ++LK+K+GNRSNA+ E+EF +  G+LLG+       +  M  +   
Sbjct: 245 PRLLPDGSRNAIQLEQLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMAGMTRF 304

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR + + A+ +A +R V G  L+DQP+M++ +A  AL +   TAL  RLA 
Sbjct: 305 DCALGSHGQMRRAFSVALWHAHQRQVMGKNLVDQPLMRQVLAQQALQLEGQTALLMRLAR 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++ +  ++  E A+AR+  P  KY  CK     +AE+ME +G S
Sbjct: 365 AWSQ-PAKPHEVAFARLFTPAAKYVICKAGAPFVAESMEVLGAS 407


>gi|167518089|ref|XP_001743385.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778484|gb|EDQ92099.1| predicted protein [Monosiga brevicollis MX1]
          Length = 930

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/543 (32%), Positives = 269/543 (49%), Gaps = 22/543 (4%)

Query: 2   TLREIYRRLAMNQVH-QPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELE 59
           T+  + R+ A  +V  +P       NQ       NA+ +D  L  A++    S   + LE
Sbjct: 18  TVSNLQRQAASTKVFAEPEAHRKVENQVNSLGDFNAFKADPCLQDAVLRAGASWATEHLE 77

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            +G    S   Q LA  AN + P +H +   G R D V++  ++H ++      G+    
Sbjct: 78  NVGAVAGSTWMQSLAVQANTHRPIIHTHDDRGRRVDMVQYDDSYHTIMDICFSQGVPNYG 137

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAP 176
           W    E    K A   R+A  Y+M Q E+G     ++T A +  L   +   +    WA 
Sbjct: 138 WTHEAE----KGAQSARSALSYMMYQAESGTQCPQTMTFACVPVLRKGLNEEQARYGWAE 193

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-----YCLSGH 231
           K    +YDP N    +K +V IG+ +TE +GG+D+ A ++  + +  G      + L GH
Sbjct: 194 KAACPDYDPRNVPVYEKEAVTIGMSMTEVQGGSDVRANSTFAEPLK-GFEHVRGHLLHGH 252

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPN-GLCYQRLKNKIGNRSNATVEL 289
           KWF S+PMSD F+ LAQ    + CFLVPR +   G  N GL ++RLKNK+G+ SNA+ E+
Sbjct: 253 KWFTSAPMSDGFLTLAQTSEGLSCFLVPRWVPSTGERNQGLQFRRLKNKLGDHSNASSEV 312

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E+   +  L+G+       + DM     LD  + S   +R  L+EA+H+  +R   G  L
Sbjct: 313 EYHGAYAELVGEPGRGVPTIIDMVQHTRLDCLVGSAGLIRRCLSEALHHTSQRAAFGAKL 372

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            DQP+MK  + D+ +D  AATAL+F +A++FD    +     + RI  PI KY+ CK AP
Sbjct: 373 ADQPLMKAVLTDLIVDSEAATALAFLVASTFDNDGDKK----FGRIATPIGKYYVCKRAP 428

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
               E +E +GG+GY+E+  + R YR++P N+I  GSGN + LDVL    +     E L 
Sbjct: 429 HFAYECLEALGGNGYVEDSIMPRLYRQAPLNAIWEGSGNVIALDVLRSAAREPETVEVLL 488

Query: 470 STLEQDLGSSG-KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
             L    G       +  L   +   ++D   AR L  + A+   A AL      +  ++
Sbjct: 489 QRLGSVQGVPAYDAALKRLHGLLHSVQKDMSQARALVGQAAMLLQAYALSLQTNTETFEL 548

Query: 529 FLE 531
           F +
Sbjct: 549 FCQ 551


>gi|218458995|ref|ZP_03499086.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Kim 5]
          Length = 233

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/233 (54%), Positives = 162/233 (69%), Gaps = 1/233 (0%)

Query: 12  MNQVHQPSDSLFALNQ-PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M   ++  D L  LN   P+        SD L+V L A  P  + ++LE +G YV S  A
Sbjct: 1   MTSANRTDDKLAELNPAEPVVRASTPTRSDPLIVDLTAALPRGIREDLENMGRYVTSPEA 60

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + 
Sbjct: 61  QELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKD 120

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +AHK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  
Sbjct: 121 EAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPA 180

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           MQK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAF
Sbjct: 181 MQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAF 233


>gi|240850657|ref|YP_002972057.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup]
 gi|240267780|gb|ACS51368.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup]
          Length = 539

 Score =  250 bits (638), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 282/530 (53%), Gaps = 11/530 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           N + SD+L+  + +  P  +    E +G++  S  A +L+ +AN+  P L      G+  
Sbjct: 13  NTFLSDTLMFRIASTLPKFLLASFEEIGDFAASREACKLSCLANHYKPLLCYNDEWGQPT 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +K+E H ++ AL + S   GL  S+W+  S E  VR QA   RA RL L A LE GHL  
Sbjct: 73  EKLEIHSSYQALQQYSRQAGLVTSLWENTSSENGVRYQA---RAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE-KRGGTDIA 212
             +TSA++  L++   + K W   + SR+YD ++K    K + ++     + ++   +  
Sbjct: 130 VIITSAAIAVLISDIELFKKWQNVLLSRQYDSSSKPIHHKKAASLTCAFDDIEKYAFNFP 189

Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           ++   S    +   +Y L+  K  + +P +D +++ A + G + CF +PR+ E+G+ NG 
Sbjct: 190 SVKKISFDDSMERDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFIPRIQENGALNGF 249

Query: 271 CYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              R L  + G        ++F  ++G+LLG+       ++D++ ++  D +++S   +R
Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGSYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   I + R++  +  +    P+ +R  ADIALDIAA+ AL  RLA +FD A +   E
Sbjct: 310 AALQFGIDFFRKKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA+ARIM PI  Y   ++   +I E +  +G   +IE   +++     PA  +   S N 
Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARIVRNSSANQ 426

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +V D + + EK   LF++L   +  D+G +G + I I++ +  +   ++G  RF  E++A
Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            A++AAAL    +  +A+ ++E+R      S++ ML  R+NA H+++ LY
Sbjct: 487 YAAAAAALRSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536


>gi|49475586|ref|YP_033627.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1]
 gi|49238393|emb|CAF27620.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1]
          Length = 598

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 164/533 (30%), Positives = 288/533 (54%), Gaps = 14/533 (2%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+ SD+L+  + +  P+ +    E +G++V S  A ELA +AN   P L      G+  
Sbjct: 69  NAFLSDTLMFRIASTLPTFLLASFEEIGDFVASRKAWELASLANRYRPMLRYNDEWGKPT 128

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +K+E H ++ AL + S   GL  S+W+  S E  +R QA   RA RL L A LE GHL  
Sbjct: 129 EKLEIHSSYKALQQYSRQAGLVTSLWENTSSENGIRYQA---RAIRLALSASLETGHLNE 185

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
             +TSA++  L++   + K W   + SR+YD ++K    K + ++     +    ++   
Sbjct: 186 VIITSAAIAVLISDVELFKKWQNALLSRQYDLSSKPVNSKKAASLTCAFDDFEKHEKHSF 245

Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  ++   S  +K+   +Y L+  K  + +P+ D +++ A+++G + CFLVPR+ E+G+ 
Sbjct: 246 NFPSVKKISFDEKMGRDLYRLNVVKTNVINPIVDGYLVSAELDGHLSCFLVPRMQENGAL 305

Query: 268 NG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG +  + L  + G  S     +EF  + G+LLG+       ++D++ ++  D +++S  
Sbjct: 306 NGSISIRHLILRSGETSTPEGIVEFQGSCGWLLGNAGEGIKVIKDIETMMRFDQSVVSAG 365

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  AI + R++  +  +    P+ +R  ADIALDIAAA AL  RLA +FD A + 
Sbjct: 366 VLRAALQFAIDFFRQKMPNQPL---SPLTERIFADIALDIAAAQALVLRLARAFDNAAND 422

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI  Y   ++   +I E +  +G   +IE+  +++     PA  +   S
Sbjct: 423 RSEAAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIEDNPLSQMLCNGPARIVRNTS 482

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + EK   LF++L      D+G +G + I I++ +  +   ++G  RF  E
Sbjct: 483 ANQLVKDAILIAEKAPGLFQKLLEKTALDIGPAGPRAIEIIKSAAEMASANEGAGRFFVE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A A +AA+L    +  +A  ++E+R      S++ ML  R+NA  +++ LY
Sbjct: 543 QVAYAVAAASLRSTDIEHVASAYMESRLGGQWRSSYGMLIARYNAGLLLNVLY 595


>gi|330895555|gb|EGH27865.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 342

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 174/311 (55%), Gaps = 2/311 (0%)

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR   D + N    QRLKNK+GN SNA
Sbjct: 6   YELVGHKWFCSAPMCDAFLALAQTDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNA 65

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + E+EF     +++G+       + +M  +   D  I S + MR +L +A H+   R VS
Sbjct: 66  SSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQALTQATHHCAYRAVS 125

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G +L +QP+M+  +AD+AL+  AA AL+ R+  + D  +    E  + R++  + KYW C
Sbjct: 126 GRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHEKRFVRLVTAVGKYWIC 184

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           K APA+I EA EC+GG+GY+E+  + R YRE+P NS   GSGN   LDVL  L K     
Sbjct: 185 KRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGAL 244

Query: 466 EQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
           + LF  L    G       I  L+ +     + +  AR LTE IA+A     L  AG   
Sbjct: 245 DALFDELGDGHGDRHLAAHIGTLKAAFRDTGDIQYRARQLTEDIAIALQGKLLLEAGNAA 304

Query: 525 IADVFLENRFL 535
           ++D F+  R +
Sbjct: 305 VSDGFIAGRLV 315


>gi|218673025|ref|ZP_03522694.1| putative acyl CoA-like DNA repair protein [Rhizobium etli GR56]
          Length = 216

 Score =  217 bits (552), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 105/180 (58%), Positives = 137/180 (76%)

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P 
Sbjct: 33  IDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPV 92

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G
Sbjct: 93  NAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEG 152

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A++I+D LY
Sbjct: 153 AARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLY 212


>gi|289812368|ref|ZP_06542997.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 327

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 174/304 (57%), Gaps = 1/304 (0%)

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ 
Sbjct: 2   LVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASA 61

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + AI++A +R   G 
Sbjct: 62  EVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGK 121

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            LI+QP+M++ ++ +AL +   TAL FRLA ++ E +  ++EA +AR+  P  K+  CK 
Sbjct: 122 PLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQ 180

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
               +AEAME +GG GY EE  + R YRE P NSI  GSGN M LDVL +L K   +++ 
Sbjct: 181 GIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDV 240

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
           L     +  G        + +    L K D+ + R +T+++ L    A + R     +A 
Sbjct: 241 LSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLRHASPPLAQ 300

Query: 528 VFLE 531
            + +
Sbjct: 301 AWCQ 304


>gi|301632572|ref|XP_002945356.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis]
          Length = 377

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 10/342 (2%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +TEK+GG+D+    +  +    G         Y L+GHKWF S P SD F  LA+V+  +
Sbjct: 1   MTEKQGGSDLRETQTTARFSHAGDYHGATAHWYELTGHKWFCSVPQSDGFFTLAKVDDGI 60

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR L DGS N    QRLK+K GN+SNA+ E+E++ T    +G        +    
Sbjct: 61  TCFFLPRTLPDGSHNRFFVQRLKDKAGNKSNASSEVEYAGTLAIRVGAEGRGIREILSHA 120

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  LD AI S   MR +L  A+ +   R+  G  + D+P+M   +AD+A+++ AAT ++
Sbjct: 121 HLTRLDFAIGSAGLMRQALTLALRHTSTRNAFGSTIADRPMMTNVLADMAVEVEAATLMA 180

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D   +   E   AR+  P  K++ C  AP++  EA++C GG+G+IEE  +AR 
Sbjct: 181 LRVAKATDLMGTSVHERLLARVATPAAKFFNCSRAPSIANEALQCHGGNGFIEENPMARV 240

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE+P NS+  G+ N M +DV   + +     + L   L    G   +   ++      +
Sbjct: 241 YREAPLNSVWEGTANMMCMDVRRAMVRDARTIDALLDELRPLAGQDARFDALVAHTERLV 300

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
               +D+ LAR +TE +A     A + R    + AD FL  R
Sbjct: 301 RAALDDEFLARPMTEAVARVLQGAEMLRHASQEAADAFLATR 342


>gi|313646339|gb|EFS10801.1| aidB domain protein [Shigella flexneri 2a str. 2457T]
          Length = 296

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 8/288 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLG 282


>gi|332083186|gb|EGI88417.1| protein aidB domain protein [Shigella boydii 5216-82]
          Length = 300

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 8/288 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLG 282


>gi|317406879|gb|EFV86962.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 317

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 167/297 (56%), Gaps = 13/297 (4%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L AY   G R D V+FHPAW  L+   +  GLH   W    +PV   Q    R
Sbjct: 4   ANRYPPRLQAYDRTGHRIDHVDFHPAWQLLMSGIVARGLHSRAW---AQPVPGAQV--AR 58

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTP----RVHKDWAPKIFSREYDPTNKAPMQ 192
           AA   +  Q+EAG L   ++T A++  L   P        DW P ++SRE+D  +     
Sbjct: 59  AAAYLMQGQVEAGTLCPTTMTFAAVPLLQREPAGVIDYTGDWLPALYSREFDGADAPLAG 118

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+GLTEK+GG+D+ A+T++      I  G  Y L GHKWF S P +DA ++LAQ
Sbjct: 119 KRGALIGMGLTEKQGGSDLRAVTTRAAPLGAIGRGCAYSLVGHKWFFSVPQADAHLVLAQ 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  +GCFLVPR + DG  N +  +RLK+K+GN SNA+ E+EF + +G ++G+       
Sbjct: 179 TDEGLGCFLVPRWIPDGPRNAVRIRRLKDKLGNHSNASAEVEFEDAWGVMVGEPGRGLAV 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + +M     LD  + S + +R +L +++H+A  R   G  L+ QP+M+  + D+AL+
Sbjct: 239 LLEMAATTRLDCVLGSAALLRQALVQSLHHACHRQAFGKPLLAQPLMRNVLGDLALE 295


>gi|229494748|ref|ZP_04388506.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229318415|gb|EEN84278.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 571

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 224/451 (49%), Gaps = 43/451 (9%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   +E     L+ LG    +    ELA +A+ N P L  + 
Sbjct: 1   MNFAHTDPALTAVVDRWTAGADRETLNGLLDRLGRDA-AGRLSELADIADKNPPVLQQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDRSFEPVVRKQAHKIRAA 138
             G+R D++ +HPA+  L R + ++          GLH   WD    P+ +  A      
Sbjct: 60  KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHG--WDSVHPPLAKYLAS----- 112

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVA 197
             Y+  Q E G     S+T A+   L    R+  D  P +FS   D  T+  P Q  + A
Sbjct: 113 --YIFVQAEFGLACPVSMTDAAARTL----RMFGD--PAVFSPWIDALTSTDPEQAKTGA 164

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
             + +TE + GTDIA   ++ ++  DG + L+G KWF S+P +D  I LA+  G      
Sbjct: 165 --MFMTEIQAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGST 221

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             VG F+VP+ L  G  N L   RLK+K+G RS  + E+  +      +G+L+     + 
Sbjct: 222 RGVGMFMVPKTLGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMA 281

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L +A+ S + MR ++ EA+ +++ R V G  L DQP+M+  +  +ALD  A+ 
Sbjct: 282 EMVNTSRLSNAMRSSALMRRAVREAVEHSKSRVVFGKRLFDQPLMRATLLPLALDAEASL 341

Query: 371 ALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL    A     A    E+A A  R++ PI K++ CK A  V  EAME  GG+GYIEE  
Sbjct: 342 ALVAYSAQCLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWV 401

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            AR  R++   SI  GS N + LDVL  L K
Sbjct: 402 NARLVRDAHLGSIWEGSSNVIALDVLRCLRK 432


>gi|226309399|ref|YP_002769359.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188516|dbj|BAH36620.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 571

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/451 (32%), Positives = 225/451 (49%), Gaps = 43/451 (9%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   +E     L+ LG    +    ELA +A+ N P L  + 
Sbjct: 1   MNFAYTDPALTAVVDRWTAGADRETLNGLLDRLGRDA-AGRLSELADIADKNPPVLQQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDRSFEPVVRKQAHKIRAA 138
             G+R D++ +HPA+  L R + ++          GLH   WD    P+ +  A      
Sbjct: 60  KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHG--WDSVHPPLAKYLAS----- 112

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVA 197
             Y+  Q E G     S+T A+   L    R+  D  P +FS   D  T+  P Q  + A
Sbjct: 113 --YIFVQAEFGLACPVSMTDAAARTL----RMFGD--PAVFSPWIDALTSTDPEQAKTGA 164

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
             + +TE + GTDIA   ++ ++  DG + L+G KWF S+P +D  I LA+  G      
Sbjct: 165 --MFMTEIQAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGST 221

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             VG F+VP+ +  G  N L   RLK+K+G RS  + E+  +      +G+L+     + 
Sbjct: 222 RGVGMFMVPKTVGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMA 281

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L +A+ S + MR ++ EA+ +++ R V G  L DQP+M+  +  +ALD  A+ 
Sbjct: 282 EMVNTSRLSNAMRSSALMRRAVREAVEHSKSRVVFGKKLFDQPLMRATLLPLALDAEASL 341

Query: 371 ALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL    A     A    E+A A  R++ PI K++ CK A  V  EAME  GG+GYIEE +
Sbjct: 342 ALVAYSAQCLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWA 401

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            AR  R++   SI  GS N + LDVL  L K
Sbjct: 402 NARLVRDAHLGSIWEGSSNVIALDVLRCLRK 432


>gi|213420188|ref|ZP_03353254.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 285

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/280 (38%), Positives = 162/280 (57%), Gaps = 1/280 (0%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ L
Sbjct: 2   SDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRL 61

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       +  M  +  LD A+ S   MR + + AI++A +R   G  LI+QP+M++ +
Sbjct: 62  GEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTL 121

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           + +AL +   TAL FRLA ++ E +  ++EA +AR+  P  K+  CK     +AEAME +
Sbjct: 122 SRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVL 180

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY EE  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G  
Sbjct: 181 GGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQD 240

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
                 + +    L K D+ + R +T+++ L    A + R
Sbjct: 241 RHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLR 280


>gi|218661251|ref|ZP_03517181.1| putative acyl CoA-like DNA repair protein [Rhizobium etli IE4771]
          Length = 168

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 93/159 (58%), Positives = 121/159 (76%)

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +YWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P N+I  GSGN M LDVL +L +
Sbjct: 6   QYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNR 65

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
           G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G AR L E++ALA+ AA LYR 
Sbjct: 66  GKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEGAARLLVEQLALAAGAAELYRL 125

Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           G   IAD F+E R      ST+ ML  RF+A++I+D LY
Sbjct: 126 GAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLY 164


>gi|121599566|ref|YP_994233.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385246|ref|YP_001028114.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|121228376|gb|ABM50894.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
          Length = 298

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/274 (39%), Positives = 155/274 (56%), Gaps = 5/274 (1%)

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     LD  I S + MR +L
Sbjct: 2   QRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRAAL 61

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEA- 390
            +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA++F+E A +RS +A 
Sbjct: 62  VQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAHAFEEDAAARSPQAR 121

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + RI+    K+W CK       EAME  GG+GY+E   +AR YRE+P NSI  GSGN M
Sbjct: 122 GWRRIVTSAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVM 181

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDK-GLARFLTEK 507
            +DVL  +E+  +    LF         S      +  L   +SL  E +   AR + ++
Sbjct: 182 CIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLEPEPREACARRIAQR 241

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           IAL + A+ L R G   +A  F+  RF  +   T
Sbjct: 242 IALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 275


>gi|324997693|ref|ZP_08118805.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 982

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 202/409 (49%), Gaps = 33/409 (8%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--- 129
           LAR A+ + P+   + P GER D++EFHPA+  L   + H      +   S  P V    
Sbjct: 58  LARTADRHPPRHVPFAPSGERIDEIEFHPAYDGLAEVAFH---RFGLAAMSHRPGVNGWP 114

Query: 130 -KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            +  H ++ A  YL  Q E G     S+T ++        R+ + +    F+ E D  + 
Sbjct: 115 GRTPHVVKYALSYLFVQSEFGIACPLSMTDSAA-------RILRLFDAGRFAAEIDALSS 167

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                T+    + +TE  GGTD+    ++     D  + L+G KWF S+  +D  + LA+
Sbjct: 168 TD-PATAATGAMFMTEIDGGTDVGRTATEATDHGDH-WTLTGRKWFCSNVTADVVLTLAR 225

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           V G+      +G FLVPR   DGS N +   RLK+K+G RS A+ E+     +   +G+L
Sbjct: 226 VPGQGEGTRGLGMFLVPRTRPDGSRNAVRVDRLKDKLGTRSMASGEVTLEGAWAQPVGEL 285

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +     + +M  +  L +A+ S + MR ++ EA+ + R R VSG  L D+P+M+  +  +
Sbjct: 286 SRGFLQMAEMVNVSRLSNAMRSAALMRRAVREAVDHTRERVVSGTALFDKPLMRATLLPL 345

Query: 363 ALDIAAATALSFRLANSFDEAKS---------RSEEAAYA--RIMAPITKYWCCKMAPAV 411
            LD  A+ AL    A+  D A +          ++ AA +  RI+ P+ KY  CK A  V
Sbjct: 346 LLDAEASLALVLECADRLDAADAVTFGEVTGDAADPAARSLIRILTPLAKYTVCKRARFV 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             E ME  GG+GYIE+    R  R++   SI  GS N + LD+L  L K
Sbjct: 406 TGETMEIRGGNGYIEDFVDPRLLRDAHLGSIWEGSSNVIALDILRCLRK 454


>gi|218660229|ref|ZP_03516159.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli IE4771]
          Length = 145

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/145 (60%), Positives = 107/145 (73%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +G YV S  AQELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+W
Sbjct: 1   MGRYVTSPEAQELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVW 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D   +   + +AHK+RAAR YL AQLE GHL   ++TSAS+ AL  +P V KDWAPKI S
Sbjct: 61  DPQADTDAKDEAHKVRAARFYLTAQLETGHLCPLTMTSASVAALSASPAVQKDWAPKILS 120

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEK 205
           R+YD +N+  MQK++V IG+G+TEK
Sbjct: 121 RKYDSSNRPAMQKSAVTIGMGMTEK 145


>gi|163855144|ref|YP_001629442.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258872|emb|CAP41171.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 562

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 218/445 (48%), Gaps = 23/445 (5%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N +S+D    +L A + P  +H      LE LG          LA +A+ N P L   
Sbjct: 16  GLNLFSADPYAASLCALYLPPDLHAHLLPHLERLGALA-GGHIDALAAVADQNPPTLSVR 74

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVVRKQAHKIRAARLYLMA 144
              G+   +V  HPA+  L R +  +    ++  R      P     A K   + L++ A
Sbjct: 75  NRAGQDESRVHKHPAYVELERLAYSEFGLAALSHRGGVLDWPAPMPPAAKYALSHLFVQA 134

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +      +S + + A  +     P + +   P++ S+++D   +  M          +TE
Sbjct: 135 EFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDELRQGAMF---------MTE 185

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FLVP 259
           +  G+D++A T++ +  +DG + L G KWF S+P +   ++LA+ E   G      FL+P
Sbjct: 186 QGAGSDVSATTTRAEPQADGTWRLHGDKWFCSNPDAGFAMVLARSEDMPGLKGVSLFLLP 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R L DG+ N     RLK+K+G RS A+ E+       +L+G+       + DM     L 
Sbjct: 246 RDLPDGTHNAYRILRLKDKLGTRSMASGEIRLEGALAWLVGERGKGFKHMADMINNSRLS 305

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           + + +   MR ++ EAI++A+ R   G  LID P+M+R +A + +    A ++ F+ A +
Sbjct: 306 NGMRAAGLMRRAVTEAIYFAQHRRAFGKRLIDMPLMRRQLAKMNVWAEQARSVMFQTAAA 365

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +A+  ++ AA ARI+ P+ K+  C+ A  V  + ME  GG GYIEE   AR  R++  
Sbjct: 366 LADAEQNADAAALARILTPLIKFRACRDARKVTGDGMEVRGGCGYIEEFVEARLVRDAHL 425

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464
            SI  G+ N + LDVL  ++K   L
Sbjct: 426 GSIWEGTSNIVALDVLRAIQKTDAL 450


>gi|108800992|ref|YP_641189.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870133|ref|YP_940085.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436829|ref|YP_001072520.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771411|gb|ABG10133.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696222|gb|ABL93295.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236629|gb|ABO00030.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 582

 Score =  170 bits (430), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 227/482 (47%), Gaps = 50/482 (10%)

Query: 32  IGMNAYSSDSLLVALIANF--PS---VVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y++D  L   +A +  P    V    L  +GE +    A+  A   + N P+L  
Sbjct: 24  VGLNWYTTDPTLQFTLAYYVPPDQLPVAETHLTRIGELMGGAVAR-WAEETDRNPPRLER 82

Query: 87  YGPGGERWDKVEFHPAWHALLR------RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           Y   G    +V   P++ A  R      +++ D +  +   RS  P+          A  
Sbjct: 83  YDKWGHDVSRVVMPPSFTAAKRAVLDAQQALRDDMRAA-GGRSSIPMF---------AAN 132

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL+ Q + G L     T   MVA +       D    + +       K    + +     
Sbjct: 133 YLLNQADIG-LGCALGTGGGMVAALVAAYAPADVRDHVLA-------KFESGEWAGETAQ 184

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
            LTE+ GG+D+ A+ +   +  D  + L G KWF S+   +AF++LA+ EG       V 
Sbjct: 185 MLTERTGGSDLGALETTATRRGDA-WRLDGFKWFASNCDGEAFVVLAKPEGAPDSGRGVA 243

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE--- 310
            FLV R   DGS NG+  +RLKNK+G RS A+ E+EF +   FLL G+ +   GP +   
Sbjct: 244 SFLVLRTRRDGSRNGVRIRRLKNKLGTRSVASGEVEFVDAEAFLLSGEPSTEAGPSDGKG 303

Query: 311 -----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                ++     L  A+ +V   R +L E++ YAR RH  G  LID+P+M+R +A++ +D
Sbjct: 304 LGRMMELTNAARLGIALFAVGNARRALVESLTYARNRHAFGSALIDKPLMRRKLAEMIVD 363

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA AL F   +    A  R       RI  P+TK   C++     ++A+E  GG+GYI
Sbjct: 364 VEAAQALVF---DCTGLANHRQPRRVRQRIAVPVTKLKVCRLGITAASDAVEIHGGNGYI 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           E+  +AR  R++  N+I  G  N + LDV   + +  +  EQL S L   +  S  +  T
Sbjct: 421 EDWPVARLLRDAQVNTIWEGPDNILCLDVARGIRR-AHAHEQLLSRLHDAVSVSDDEATT 479

Query: 486 IL 487
            L
Sbjct: 480 AL 481


>gi|313675612|ref|YP_004053608.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942310|gb|ADR21500.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 574

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 223/482 (46%), Gaps = 32/482 (6%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+ N PQL      GE  D+V+FHP++  L++ +I   +    W+ + +   + + H + 
Sbjct: 70  ADKNGPQLVKRNFFGEDIDEVKFHPSYQELMQIAIDSEMFKVKWEPNLKEAFKHERHSLG 129

Query: 137 AARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            A  YL A  E G      +T   A ++ L  T    K   P I++ E          + 
Sbjct: 130 FAPGYLYAMSELGQYCPLCMTDGVARLIDLHCTEEDKKRLLPHIYTTEL---------RD 180

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----E 250
                + LTEK GG+D+     + +K  DG Y LSG KWF S+  ++    LA+     E
Sbjct: 181 FFTGAMFLTEKSGGSDVGRNLVKAEKQKDGSYLLSGEKWFCSNVNAELIFALARTDESKE 240

Query: 251 GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G  G   FL+ + L DGS N L   RLK+K+G RS A+ E     T G L+GD       
Sbjct: 241 GTRGLSIFLIEKTLPDGSKNKLPIVRLKDKLGVRSMASAECILDGTVGMLVGDEFNGFKI 300

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + DM  L  L ++I ++SG R +L EA ++   R   G   I+ P++K  + ++     A
Sbjct: 301 MTDMINLSRLYNSIAALSGARRALVEAYNFNLFRKSFGKTAIEHPLIKEKLFELGSLNVA 360

Query: 369 ATALSFRLANSFDEAKSRSEEAA--------YARIMAPITKYWCCKMAPAVIAEAMECIG 420
              L++R   + D+A + +E A+          R++ P+ K W  + A  +  E+ME +G
Sbjct: 361 NFYLTWRAIEALDKADNGNESASRQTENEKHLGRLLTPMVKKWSAEKAVYITRESMELMG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G GYIE+  I +  R+     I  G+GN M LD+L    K   L + +   +++ LG   
Sbjct: 421 GIGYIEDGVIPKIMRDVMVLPIWEGAGNIMTLDMLRASFKSDGL-KVMMEEIKKSLGKIS 479

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           +   TIL     L  E K  + F  E+  L   A   +      +  +F  +  LDN   
Sbjct: 480 QYDDTILEHLKEL--ESKLKSLFKMEQDELELHAKYFFEK----LTTLFQLSLILDNWED 533

Query: 541 TH 542
           T+
Sbjct: 534 TN 535


>gi|218683103|ref|ZP_03530704.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli CIAT 894]
          Length = 181

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 98/127 (77%)

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +M P+ KYWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P N+I  GSGN M LDV
Sbjct: 1   VMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDV 60

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           L +L +G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G AR L E++ALA+  
Sbjct: 61  LRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEGAARLLVEQLALAAGC 120

Query: 515 AALYRAG 521
                AG
Sbjct: 121 CRTLSAG 127


>gi|27383010|ref|NP_774539.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27356183|dbj|BAC53164.1| bll7899 [Bradyrhizobium japonicum USDA 110]
          Length = 594

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 221/448 (49%), Gaps = 38/448 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQ 83
           P   GMN Y +D  L  L+  + P  + + +E     LGE +   T  E AR+A+ +TP 
Sbjct: 22  PDTSGMNFYRADQALTDLLRIHLPETLFRHIEPHLDRLGE-LAGGTLDECARLADRHTPV 80

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SI------WDRSFEPVVRKQAHKI 135
           LH     G     +E+HPA+  L + +  + G+H  SI      W   + PVV K A   
Sbjct: 81  LHQRDKFGRDVQWIEYHPAYRELEKAAFGEFGIHALSIRKGIMGWPDKY-PVVAKHAFT- 138

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY-DPTNKAPMQKT 194
                +L  Q E G     +VT      L        ++  +    +Y D   +  M K 
Sbjct: 139 -----FLFNQTEFGMGCPINVTDGCAKLL-------ANFGSEALKAKYLDGLTQTDMTKL 186

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
           +   G  +TEK GG+D+  +T++  +  D  + L G KWF S+  +   ++LA+ EG   
Sbjct: 187 TQG-GQFMTEKEGGSDVGTLTTRAVQEGDH-WRLYGEKWFCSNADAKVVMLLARPEGAGP 244

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               VG FL+ R L+DGS N     RLK+K+G RS A+ E++      + +G L+     
Sbjct: 245 GTRGVGLFLMLRFLDDGSQNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 304

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     L + + S + MR +  +A+  A+ R V G  +ID P+ +R +  I L +  
Sbjct: 305 MAEMVNSSRLSNGVKSTALMRRAYHDAMTVAKNRVVFGSRIIDLPLGRRQMLKIMLPVEQ 364

Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A ++SF  A++ D A++ S++ AA  RI+ P  K+   + A  V  +A+E  GG GYIEE
Sbjct: 365 ALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYIEE 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
            + AR  R++   S+  G+GN + +D L
Sbjct: 425 FATARLLRDAHLGSVWEGTGNIVAIDAL 452


>gi|148258335|ref|YP_001242920.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410508|gb|ABQ39014.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 594

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 225/473 (47%), Gaps = 48/473 (10%)

Query: 12  MNQVHQPSDSLFALNQPPLF----IGMNAYSSDSLLVALIA-NFPSVVHKEL-------- 58
           M+Q  +  D +    +P L      G+N Y +D  L  L+  + P  + + L        
Sbjct: 1   MHQFLKREDVMTGGARPALLAPDTTGLNFYRADPALSDLLRIHLPDTLFRHLTPHLDRLG 60

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC 117
           EL G Y+  C     AR+A+ + P LH     G     +E+HPA+  L R +  + G+H 
Sbjct: 61  ELAGGYLDEC-----ARLADRHGPVLHQRDRFGRDMQWIEYHPAYRELERAAFGEFGIHA 115

Query: 118 -SI------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            SI      W   + PVV K A        +L  Q E G     +VT      L +    
Sbjct: 116 MSIRKGILGWPDKY-PVVAKHAFT------FLFNQAEFGLGCPINVTDGCAKLLASFG-- 166

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
               +  + +R  D   +  M+K +   G  +TEK GG+D+  +T+      D  + L G
Sbjct: 167 ----SDGLKARYLDGLTQTDMRKLTQG-GQFMTEKEGGSDVGTLTTVAVPEGDH-WRLHG 220

Query: 231 HKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            KWF S+  +   ++LA+ +G       VG FL+PR L+DGS N     RLK+K+G RS 
Sbjct: 221 EKWFCSNADAKVVMLLARPQGADSGTRGVGLFLMPRFLDDGSQNRYRIVRLKDKLGTRSM 280

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           A+ E++      + +G L+     + +M     L + + S + MR +  +AI  AR R V
Sbjct: 281 ASGEIKLEGAIAYAVGRLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVARNRVV 340

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYW 403
            G  ++D P+ +R +  I L    A ++SF  A++ D A++ S++ AA  RI+ P  K+ 
Sbjct: 341 FGQRIVDLPLGRRQLMKILLATEQALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFR 400

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + A  V  +A+E  GG GY+EE   AR  R++   SI  G+GN + LD L 
Sbjct: 401 ATRDARKVCGDALEMRGGIGYVEEFVTARLLRDAHLGSIWEGTGNIVALDALK 453


>gi|295098335|emb|CBK87425.1| Acyl-CoA dehydrogenases [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 254

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 143/258 (55%), Gaps = 12/258 (4%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71
           +H  + ++F  NQP      N + SD  L   +A        +++LL   G+ + +  + 
Sbjct: 1   MHWQTHTVF--NQPAPLSNSNLFLSDCALRDAVAR--EGAEWDVDLLASIGQQLGTAESL 56

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       RK 
Sbjct: 57  ELGRLANVNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARKG 112

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +   RAAR  L AQ+EAG L   ++T +A+ + L + P+   DW   + S  YDP     
Sbjct: 113 SFVARAARFVLHAQVEAGTLCPVTMTFAATPLLLQSLPKPFHDWLTPLMSDRYDPHLAPG 172

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +
Sbjct: 173 AQKRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAK 232

Query: 251 GRVGCFLVPRLLEDGSPN 268
           G + CF VPR L DG  N
Sbjct: 233 GGLSCFFVPRFLPDGQRN 250


>gi|323166669|gb|EFZ52427.1| aidB domain protein [Shigella sonnei 53G]
          Length = 312

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 1/258 (0%)

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M  +   D A
Sbjct: 1   MPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCA 60

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA ++D
Sbjct: 61  LGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWD 120

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NS
Sbjct: 121 R-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNS 179

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  GSGN M LDVL +L K   +++ L     +  G        + R    L K  + L 
Sbjct: 180 IWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELG 239

Query: 502 RFLTEKIALASSAAALYR 519
           R +T ++ L    A + +
Sbjct: 240 REITHQLFLLGCGAQMLK 257


>gi|146338027|ref|YP_001203075.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146190833|emb|CAL74838.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 594

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 224/473 (47%), Gaps = 48/473 (10%)

Query: 12  MNQVHQPSDSLFALNQPPLF----IGMNAYSSDSLLVALIA-NFPSVVHKEL-------- 58
           M+Q  +  D +    +P L      G+N Y +D  L  L+  + P  + + L        
Sbjct: 1   MHQFLKRDDVMTGGKRPELLAPDTTGLNFYRADPALSDLLRIHLPDALFRHLVPHLDRLG 60

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC 117
           EL G Y+  C     AR+A+ + P LH     G     +E+HPA+  L R +  + G+H 
Sbjct: 61  ELAGGYLDEC-----ARLADRHGPVLHQRDRFGRDAQWIEYHPAYRELERAAFGEFGIHA 115

Query: 118 -SI------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            SI      W   + PV  K A        +L  Q E G L  P   +     L+ +   
Sbjct: 116 MSIRKGILGWPAKY-PVAAKHAFT------FLFNQAEFG-LGCPINVTDGCAKLLASFGS 167

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           H      + ++  D   +  M+K +   G  +TEK GG+D+  +T+      D  + L G
Sbjct: 168 HA-----LKAKYLDGLTQTDMRKLTQG-GQFMTEKEGGSDVGTLTTVAVPEGDH-WRLHG 220

Query: 231 HKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            KWF S+  +   ++LA+ EG       VG FL+PR L+DG+ N     RLK+K+G RS 
Sbjct: 221 EKWFCSNADAKVVMLLARPEGAEPGTRGVGLFLMPRFLDDGTQNHYRIVRLKDKLGTRSM 280

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           A+ E+       + +G L+     + +M     L + + S + MR +  +AI  AR R V
Sbjct: 281 ASGEIRLEGAIAYAVGRLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVARNRVV 340

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYW 403
            G  ++D P+ +R +  I L    A ++SF  A++ D A++ S++ AA  RI+ P  K+ 
Sbjct: 341 FGQRIVDLPLGRRQLMKILLPTEQALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFR 400

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + A  V  +A+E  GG GY+EE   AR  R++   SI  G+GN + LD L 
Sbjct: 401 ATRDARKVCGDALEMRGGIGYVEEFVTARLLRDAHLGSIWEGTGNIVALDALK 453


>gi|308376237|ref|ZP_07438107.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008]
 gi|308379622|ref|ZP_07486936.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010]
 gi|308351808|gb|EFP40659.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008]
 gi|308356543|gb|EFP45394.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010]
          Length = 551

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 152 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 210

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+ +   GP +    
Sbjct: 211 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 270

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+
Sbjct: 271 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 330

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   + F  A  R       RI  P+TK   C++   V ++A+E  GG+GYIE
Sbjct: 331 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 387

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              +AR  R++  N+I  G  N + LDV   +E+ T   E L + L
Sbjct: 388 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 432


>gi|148825004|ref|YP_001289758.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11]
 gi|254233290|ref|ZP_04926616.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C]
 gi|308232573|ref|ZP_07416496.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001]
 gi|308371458|ref|ZP_07425035.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003]
 gi|308372661|ref|ZP_07429402.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004]
 gi|308373826|ref|ZP_07433766.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006]
 gi|308374989|ref|ZP_07442313.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007]
 gi|308378475|ref|ZP_07482702.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009]
 gi|308380814|ref|ZP_07491153.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011]
 gi|124603083|gb|EAY61358.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C]
 gi|148723531|gb|ABR08156.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11]
 gi|308213680|gb|EFO73079.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001]
 gi|308328817|gb|EFP17668.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003]
 gi|308332660|gb|EFP21511.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004]
 gi|308344138|gb|EFP32989.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006]
 gi|308347940|gb|EFP36791.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007]
 gi|308352591|gb|EFP41442.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009]
 gi|308360491|gb|EFP49342.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011]
          Length = 585

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 186 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 244

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+ +   GP +    
Sbjct: 245 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 304

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+
Sbjct: 305 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 364

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   + F  A  R       RI  P+TK   C++   V ++A+E  GG+GYIE
Sbjct: 365 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 421

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              +AR  R++  N+I  G  N + LDV   +E+ T   E L + L
Sbjct: 422 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 466


>gi|215405851|ref|ZP_03418032.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis 02_1987]
 gi|215448144|ref|ZP_03434896.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T85]
 gi|289747639|ref|ZP_06507017.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987]
 gi|289759964|ref|ZP_06519342.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85]
 gi|294995289|ref|ZP_06800980.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis 210]
 gi|289688167|gb|EFD55655.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987]
 gi|289715528|gb|EFD79540.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85]
 gi|326905635|gb|EGE52568.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis W-148]
          Length = 593

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+ +   GP +    
Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 312

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+
Sbjct: 313 TRMMELTNRLRLGTAPFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 372

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   + F  A  R       RI  P+TK   C++   V ++A+E  GG+GYIE
Sbjct: 373 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              +AR  R++  N+I  G  N + LDV   +E+ T   E L + L
Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 474


>gi|15610933|ref|NP_218314.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis H37Rv]
 gi|15843419|ref|NP_338456.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31794970|ref|NP_857463.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium bovis AF2122/97]
 gi|121639714|ref|YP_979938.1| putative acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663665|ref|YP_001285188.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|167967229|ref|ZP_02549506.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|215413724|ref|ZP_03422392.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215432778|ref|ZP_03430697.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|218755585|ref|ZP_03534381.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis GM 1503]
 gi|219559886|ref|ZP_03538962.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T17]
 gi|224992209|ref|YP_002646899.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800845|ref|YP_003033847.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435]
 gi|254366343|ref|ZP_04982387.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552912|ref|ZP_05143359.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184722|ref|ZP_05762196.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|260198845|ref|ZP_05766336.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289441234|ref|ZP_06430978.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289445398|ref|ZP_06435142.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|289556064|ref|ZP_06445274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605]
 gi|289572047|ref|ZP_06452274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17]
 gi|289755930|ref|ZP_06515308.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|289763982|ref|ZP_06523360.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503]
 gi|297636479|ref|ZP_06954259.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207]
 gi|297733473|ref|ZP_06962591.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN R506]
 gi|298527272|ref|ZP_07014681.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|307086596|ref|ZP_07495709.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012]
 gi|313660804|ref|ZP_07817684.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950416|emb|CAA17861.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE35 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883787|gb|AAK48270.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31620568|emb|CAD96012.1| PROBABLE ACYL-COA DEHYDROGENASE FADE35 [Mycobacterium bovis
           AF2122/97]
 gi|121495362|emb|CAL73849.1| Probable acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134151855|gb|EBA43900.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507817|gb|ABQ75626.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|224775325|dbj|BAH28131.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253322349|gb|ACT26952.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435]
 gi|289414153|gb|EFD11393.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289418356|gb|EFD15557.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|289440696|gb|EFD23189.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605]
 gi|289545801|gb|EFD49449.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17]
 gi|289696517|gb|EFD63946.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|289711488|gb|EFD75504.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503]
 gi|298497066|gb|EFI32360.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308364008|gb|EFP52859.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012]
 gi|328460573|gb|AEB05996.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207]
          Length = 593

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+ +   GP +    
Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 312

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+
Sbjct: 313 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 372

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   + F  A  R       RI  P+TK   C++   V ++A+E  GG+GYIE
Sbjct: 373 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              +AR  R++  N+I  G  N + LDV   +E+ T   E L + L
Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 474


>gi|33603021|ref|NP_890581.1| putative oxidoreductase [Bordetella bronchiseptica RB50]
 gi|33568652|emb|CAE34410.1| putative oxidoreductase [Bordetella bronchiseptica RB50]
          Length = 569

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 194/401 (48%), Gaps = 17/401 (4%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVV 128
           ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R      P  
Sbjct: 65  ELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPDP 124

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              A K   + L++ A+      +S + + A  +     P + +   P++ ++++D   +
Sbjct: 125 MPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDFDQLQQ 184

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
             M          +TE+  G+D++A T   Q  +DG + L G KWF S+P +   ++LA+
Sbjct: 185 GAM---------FMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFAMVLAR 235

Query: 249 VEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            E   G      FL+PR L DGSPN     RLK+K+G RS A+ E+       +L+G   
Sbjct: 236 SEPNAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWLVGQRG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + DM     L + + +   MR +L EA+ +A++R   G  LID P+M+R +A +A
Sbjct: 296 QGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQLAKMA 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    A ++ F+ A +   A     EAA  RI+ P+ K+  C+ A  V  +AME  GG G
Sbjct: 356 MRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEVRGGCG 415

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           YIEE    R  R++   SI  G+ N + LDVL  + K   L
Sbjct: 416 YIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADAL 456


>gi|33598128|ref|NP_885771.1| putative oxidoreductase [Bordetella parapertussis 12822]
 gi|33566686|emb|CAE38896.1| putative oxidoreductase [Bordetella parapertussis]
          Length = 569

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 194/401 (48%), Gaps = 17/401 (4%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVV 128
           ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R      P  
Sbjct: 65  ELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPDP 124

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              A K   + L++ A+      +S + + A  +     P + +   P++ ++++D   +
Sbjct: 125 MPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDFDQLQQ 184

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
             M          +TE+  G+D++A T   Q  +DG + L G KWF S+P +   ++LA+
Sbjct: 185 GAM---------FMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFAMVLAR 235

Query: 249 VEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            E   G      FL+PR L DGSPN     RLK+K+G RS A+ E+       +L+G   
Sbjct: 236 SEPDAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWLVGQRG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + DM     L + + +   MR +L EA+ +A++R   G  LID P+M+R +A +A
Sbjct: 296 QGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQLAKMA 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    A ++ F+ A +   A     EAA  RI+ P+ K+  C+ A  V  +AME  GG G
Sbjct: 356 MRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEVRGGCG 415

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           YIEE    R  R++   SI  G+ N + LDVL  + K   L
Sbjct: 416 YIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADAL 456


>gi|301631397|ref|XP_002944784.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis]
          Length = 565

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 214/451 (47%), Gaps = 41/451 (9%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N Y+ D+ L  L+A + P  + + +    E LG ++      ELA  A+ N P L + 
Sbjct: 18  GQNLYTVDAELQRLLALYLPDGLRRHMAPHFERLG-HLAGGRLDELAAAADRNPPVLESR 76

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139
              G    ++  HPA+  +   ++ +    SI        W     P V+          
Sbjct: 77  TRTGLDVQRIVKHPAYVEMEHLALSEFAMGSISHRDETFGWQGRMPPAVKY-------VL 129

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            YL  Q E G     S+T +    L    +P +   +  ++ S ++D   +  M      
Sbjct: 130 FYLFVQAEFGLCCPVSMTDSLTRTLKKFGSPELVGRFLARLTSLDFDELAQGAMF----- 184

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               +TE+  G+DIAA T+  +  ++G + LSG KWF S+P +D  ++LA+V+G      
Sbjct: 185 ----MTEQAAGSDIAATTTLARAGANGTWLLSGDKWFCSNPDADFAMVLARVDGGPPGMK 240

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G+       V D
Sbjct: 241 GVSLFLLPRRLEDGSLNHYHIVRLKDKMGTRSMASGEIRLQGAVAYLVGEQGRGFVQVAD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L + + +   MR ++AEA H A  R   G  L D P+M+R I  + +    A  
Sbjct: 301 MVNNSRLSNGVRAAGLMRRAVAEAEHVASERRAFGKRLQDMPLMQRQIDKLRVPAEQART 360

Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           + F+ A +   + +  E+ AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S
Sbjct: 361 MMFQTALALQRSDA-GEDGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 419

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             R  R++   SI  G+ N + LDV+  + +
Sbjct: 420 DPRLVRDAHLGSIWEGTSNIVALDVVRAIRR 450


>gi|237798437|ref|ZP_04586898.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021288|gb|EGI01345.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 304

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 146/288 (50%), Gaps = 11/288 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMA 77
           +++    NQPP   G+N Y  D  L      + +      ++  G  +          +A
Sbjct: 7   AETHLVTNQPPSLDGVNLYRIDLPLQKWSQRYGACWAQARIDAYGA-LAGGPLMAAGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+  +I  G+    W    EP  +  AH  RA
Sbjct: 66  NRNKPVFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGITSLPWT---EP--QPGAHVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q + G     ++T AS+ AL   P +   W PK+ S +YDP N     K    
Sbjct: 121 AMSYLHTQADPGRGCPLTMTFASVPALRQQPGLADIWLPKVLSTQYDPRNVGIAHKAGAT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++      G     Y L GHKWF S+PM DAF+ LAQ    +
Sbjct: 181 IGMAMTEKQGGTDVRANTTRAFPAGVGGPGKAYELVGHKWFCSAPMCDAFLTLAQTGKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            CFL+PR   D + N    QRLK+K+GN SNA+ E+EF     +++G+
Sbjct: 241 SCFLLPRHRPDDTRNEFYIQRLKDKLGNWSNASSEVEFRGALAWMIGE 288


>gi|111019931|ref|YP_702903.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819461|gb|ABG94745.1| probable AidB protein [Rhodococcus jostii RHA1]
          Length = 571

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 203/407 (49%), Gaps = 37/407 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDR 122
           LA  A+ N P L  +   GER D++ +HP++  L R +  +          GLH   WD 
Sbjct: 44  LAATADKNPPVLQQFDRDGERIDRIAYHPSYQELCRAAYSEYGLSALSHRGGLHG--WD- 100

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P      H ++    Y+  Q E G     S+T A+   L    R+  D  P +F   
Sbjct: 101 DVPP------HLVKYLASYVFVQAEFGLACPVSMTDAAARTL----RMFGD--PDVFGPW 148

Query: 183 YDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            D  T+ AP    + A  + +TE + GTDIA   ++  +  D  + L+G KWF S+P +D
Sbjct: 149 IDALTSTAPDGAMTGA--MFMTEPQAGTDIARTETRAVRDGDA-WRLTGKKWFASNPDAD 205

Query: 242 AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
             + LA+  G        VG F+VP++L +G  N     RLK+K+G RS  + E+  +  
Sbjct: 206 VIVTLARFPGGDDQSTRGVGMFMVPKVLANGERNSYTIDRLKDKLGTRSMPSGEVSLTGA 265

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           +   +G+L+     + +M     L +A+ S + MR ++ +A+ + R R V G  L DQP+
Sbjct: 266 YAQQVGELDRGFRQMAEMVNTSRLSNAMRSSALMRRAVRDAVDHTRERVVFGKALFDQPL 325

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIA 413
           M+  +  +ALD  AA AL    A     A +  + A A  R++ P+ K++ CK A  V  
Sbjct: 326 MRATLLPLALDAEAALALVAYSAQCLQAADAGDDSAHALIRVLTPLAKHYICKRARIVTG 385

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           EAME  GG+GYIEE + AR  R++   SI  GS N + LDVL  + K
Sbjct: 386 EAMEVRGGNGYIEEWAHARLVRDAHLGSIWEGSSNVIALDVLRCMRK 432


>gi|218674772|ref|ZP_03524441.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli GR56]
          Length = 172

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 99/146 (67%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT 157
           AHK+RAAR YL AQLE+GHL   ++T
Sbjct: 121 AHKVRAARFYLTAQLESGHLCPLTMT 146


>gi|160897884|ref|YP_001563466.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363468|gb|ABX35081.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 567

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 217/454 (47%), Gaps = 39/454 (8%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G N Y++DS L  L+A + P  V+  L+   E + +   +E+   A  A+ N P+L    
Sbjct: 27  GSNLYTTDSQLQPLLALYLPPEVNAHLQPYLERMGALAGREIDEWALTADRNPPELEHRD 86

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAARL 140
             G    ++  HPA+  + R +  + GL           WD    P+ +        A  
Sbjct: 87  RTGRDAQRIVKHPAYVEMERIAYGEFGLAVMSHRTGVLGWDGKLPPLAKY-------ALT 139

Query: 141 YLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL  Q E G     S+T   A  +     P + + + P++    ++   +  M       
Sbjct: 140 YLFVQAEFGLCCPLSMTDSLARTLRKYGEPALVEKYWPRMTQLRFEDQAQGAM------- 192

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
              +TE+  G+DI+   +  +  +DG + LSG KWF S+P +D  ++LA+VEG       
Sbjct: 193 --FMTEQAAGSDISNTQTLARPAADGSWRLSGDKWFCSNPDADFAMVLARVEGAPAGMKG 250

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+PR L+DGS N     RLK+K+G RS A+ E+       +L+G+       + DM
Sbjct: 251 ISLFLLPRRLDDGSANHYRIVRLKHKLGTRSMASGEIVLDGAVAYLVGEQGRGFVQMADM 310

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L + + S   MR ++AEA + AR R   G  L D P+M+R +  + +    A  +
Sbjct: 311 VNNSRLSNGVRSAGLMRRAVAEAEYVARERRAFGKALQDMPLMQRQLDKLRIYSEQARTM 370

Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + A +   + +  E+ AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S 
Sbjct: 371 VLQTAQALQRSDA-GEDGAYALLRILTPMIKFRACRDARKVTGDAMEVRGGCGYIEEWSD 429

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            R  R+S   SI  G+ N + LDV+  +++  +L
Sbjct: 430 PRLVRDSHLGSIWEGTSNIVALDVIRAIKREGSL 463


>gi|254822501|ref|ZP_05227502.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 592

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 168/312 (53%), Gaps = 35/312 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFVVLAKPEGAPDSSRGVAN 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+    +GP +    
Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTAESGPADGKGL 312

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++     L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+
Sbjct: 313 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAEMIVDV 372

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL F    + +  + RS      RI  P+TK   C++     ++A+E  GG+GYIE
Sbjct: 373 EAAQALVFDGTGATNHRQPRS---LRQRIAVPVTKLKVCRLGITAASDAIEIHGGNGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              +AR  R++  N+I  G  N + LDV   +E+ T   E L +                
Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 473

Query: 487 LRDSISLCKEDK 498
           LRD++S+  +D+
Sbjct: 474 LRDAVSVADDDE 485


>gi|296166929|ref|ZP_06849346.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897806|gb|EFG77395.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 590

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 157/286 (54%), Gaps = 20/286 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERTGGSDLGALETTATRAGDS-WILNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAN 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+    TGP +    
Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTGDTGPSDGKGL 312

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++     L  A+  +   R +L E++ YARRRH  GG LID+P+++R +A++ +D+
Sbjct: 313 GRMMELTNAARLGIALFGLGNARRALVESLCYARRRHAFGGALIDKPLIRRKLAEMIVDV 372

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A A+ F   +       R   A   RI  P+TK   C++     ++A+E  GG GYIE
Sbjct: 373 ESAQAMVF---DGTGATNHRQPRAMRQRIAVPVTKLKACRLGITAASDAIEIRGGIGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              +AR  R++  N+I  G  N + LDV   +E+ T   E L + L
Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHEPLLARL 474


>gi|187923432|ref|YP_001895074.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187714626|gb|ACD15850.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 588

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 222/466 (47%), Gaps = 30/466 (6%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELEL----LGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++SD     L+  +    +  ELE     LG+   S      A  A+ N PQLH  
Sbjct: 20  GINFFTSDPDFARLLKLHLGDTLFDELESQLVSLGQRA-SSELDMWALSADKNPPQLHHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              GE    ++ HP + AL  R  +  L  +          +     ++ A  +L  Q E
Sbjct: 79  TRRGEALQSIDKHPDYVAL-ERVAYAELGLAAMSHETRDGKKSPPPLVKYALTFLFVQAE 137

Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T +    L     P +   + P + SR++D   +  M          +TE+
Sbjct: 138 FGLCCPVSMTDSLTRTLRKFGAPELVARFLPMLASRDFDTLFQGAM---------FMTEQ 188

Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGC 255
             G+D+A I ++    +D      + L G KWF S+  +D  ++LA+ +        +G 
Sbjct: 189 AAGSDVARIATRASLETDANGDETWRLYGDKWFCSNADADLAMVLARPDTAPAGINGLGL 248

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 249 FLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGALAYLIGEVGRGFHQMADMINM 308

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L EA+H AR R   G  LID P+M+R +  + L    A ++  R
Sbjct: 309 SRLSNGVRAAGLMRRALTEALHIARHREAFGRKLIDMPLMQRQLLKMMLPAEQARSMFMR 368

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A   ++A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR  
Sbjct: 369 IALLLEQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARLV 428

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           R++   SI  G+ N + LD+    ++   L E L + L+  LG++G
Sbjct: 429 RDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRTYLQDLLGAAG 473


>gi|226362078|ref|YP_002779856.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240563|dbj|BAH50911.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 568

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 213/442 (48%), Gaps = 25/442 (5%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKEL--ELLGEYVLSCTAQ--ELARMANYNTPQLHAYGP 89
           MN   +D  L A++  + +   ++    LLG        +   LA  A+ N P L  +  
Sbjct: 1   MNFAHTDPALRAVVDRWTAASERDKLNALLGRLGADAAGRLDALAATADKNPPVLEQFDR 60

Query: 90  GGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
            G+R D++ +HPA+  L R +  + GL      R          H ++    Y+  Q E 
Sbjct: 61  DGDRIDRISYHPAYQELCRAAYSEYGLSALSHRRGLHGWDAVPPHLVKYLASYVFVQAEF 120

Query: 149 GHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T A+   + +   P V   W   + S E          + ++   + +TE +
Sbjct: 121 GLACPVSMTDAAARTLRMFGNPDVFGPWIDALTSTE---------PEGAMTGAMFMTEPQ 171

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLVP 259
            GTDIA   +  ++  DG + L+G KWF S+P +D  I LA+  G        VG F+VP
Sbjct: 172 AGTDIARTETVAERDGDG-WRLTGKKWFASNPDADVVITLARFPGGENHTTRGVGMFMVP 230

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           ++L +G  N     RLK+K+G RS  + E+     +   +G+L+     + +M     L 
Sbjct: 231 KVLPNGERNSYTIDRLKDKLGTRSMPSGEVSLIGAYALQVGELDRGFRQMAEMVNTSRLS 290

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+ S + MR ++ +A+ + R+R V G  L DQP+M+  +  +ALD  AA AL    A  
Sbjct: 291 NAMRSSALMRRAVRDAVDHTRQREVFGKKLFDQPLMRATLLPLALDAEAALALVAYSAQC 350

Query: 380 FDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              A +  + A    R++ P+ K++ CK A  V  E+ME  GG+GYIEE + AR  R++ 
Sbjct: 351 LQAADADDDSARGLIRVLTPLAKHYICKRARVVTGESMEVRGGNGYIEEWAHARLVRDAH 410

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             SI  GS N + LDVL  + K
Sbjct: 411 LGSIWEGSSNVIALDVLRCMRK 432


>gi|70733886|ref|YP_257526.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68348185|gb|AAY95791.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 573

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 214/436 (49%), Gaps = 30/436 (6%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N +  D+ L AL+  + PS V+++     +++ +    EL   A  A+ N P L    
Sbjct: 19  GINLFECDAGLAALLQVYLPSAVYQQWLPTLQHLGARAGGELDVLALSADKNPPVLQPRT 78

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
             GE    +  HP +  L R +  + GL          P +      I+ A  YL  Q E
Sbjct: 79  RRGENLQSIAKHPDYVTLERVAFAELGLAAMSHQPGGPPPL------IKYALTYLFVQAE 132

Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T +    L    TP V   + P++ S++++   +  M          +TE+
Sbjct: 133 FGLCCPVSMTDSLTRTLCKFGTPEVVARYLPQLQSQDFETLFQGAM---------FMTEQ 183

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGCFLVP 259
             G+D++   ++  ++ DG + L G KWF S+P +D  ++LA+ E        V  FL+P
Sbjct: 184 AAGSDVSRTETRA-RLEDGQWRLFGEKWFCSNPDADLAMVLARPEDAPPGMAGVTLFLLP 242

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           ++L DGS N    QRLK+K+G+RS A+ E+       +L+G++      + DM  +  L 
Sbjct: 243 KVLPDGSRNHYRIQRLKDKLGSRSMASGEITLEGATAYLIGEVGRGFQQMADMINMSRLS 302

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           + + +   MR  L+EA++ AR+R   G  LI+ P+M+R +  + L    A ++  ++A+ 
Sbjct: 303 NGVRAAGLMRRGLSEALYIARQRRAFGKHLIEMPLMQRQLLKMMLPAEQARSMFMQIASL 362

Query: 380 FDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              A    E A    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR  R++ 
Sbjct: 363 LPRADGGDETARKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRDAH 422

Query: 439 ANSILLGSGNAMVLDV 454
             SI  G+ N + LD+
Sbjct: 423 LGSIWEGTSNIVALDI 438


>gi|296159351|ref|ZP_06842176.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295890335|gb|EFG70128.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 588

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 212/433 (48%), Gaps = 30/433 (6%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-- 134
           A+ N PQL      GE    ++ HP + AL R +  +     +   S E    KQ+    
Sbjct: 68  ADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAE---LGLAALSHETRDGKQSPPPL 124

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           ++ A  +L  Q E G     S+T +    L     P +   + PK+ SR++D   +  M 
Sbjct: 125 VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPKLASRDFDTLFQGAMF 184

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248
                    +TE+  G+D+A I ++    SD      + L G KWF S+  +D  ++LA+
Sbjct: 185 ---------MTEQAAGSDVARIATRASLESDADGGQTWRLYGDKWFCSNADADLAMVLAR 235

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +        +G FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++
Sbjct: 236 PDTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYLIGEV 295

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + DM  +  L + + +   MR +L EA+H AR R   G  LID P+M+R +  +
Sbjct: 296 GRGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQLLKM 355

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            L    A ++  R+A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG
Sbjct: 356 MLPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGG 415

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG- 480
           +GYIEE S AR  R++   SI  G+ N + LD+    ++   L E L + L   LG++G 
Sbjct: 416 TGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLRDLLGAAGL 474

Query: 481 -KKVITILRDSIS 492
               + +LR +++
Sbjct: 475 PPASLALLRSTLA 487


>gi|299530574|ref|ZP_07043994.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721550|gb|EFI62487.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 569

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 40/475 (8%)

Query: 13  NQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVL 66
           +QVH  + ++ A   P P   G N Y++D  L +L+A     +  + +   L+ +GE + 
Sbjct: 7   SQVHVMAQAVRAAAHPVPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGE-LA 65

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI------ 119
                ELA +A+ N P L      G+   ++  HPA+  L R +  + GL          
Sbjct: 66  GGRIDELAGVADRNPPTLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDML 125

Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAP 176
            W     P+V+        A  +L  Q E G     S+T +    L    TP +   + P
Sbjct: 126 GWSGKMPPIVKY-------ALTFLFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLP 178

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S +++   +  M          +TE+  G+DIA   +     +DG + L+G KWF S
Sbjct: 179 QLLSLDWEKQAQGAM---------FMTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCS 229

Query: 237 SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +P ++  ++LA+VEG       +  FL+PR L+DGS N     RLK+K+G +S A+ E+ 
Sbjct: 230 NPDAEFAMVLARVEGGAPGMKGISLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIR 289

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                 +L+G+       + DM     L + + S   MR ++AEA   A  R   G  L 
Sbjct: 290 MDGAVAYLVGEQGRGFVQMADMVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLE 349

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAP 409
             P+M+R +  + +    A  + F+ A +   + +   +A A  RI+ P+ K+  C+ A 
Sbjct: 350 QMPLMQRQLDKLRVPAEQARTMVFQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDAR 409

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            V  +AME  GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 410 KVTGDAMEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAIKREGSL 464


>gi|240168573|ref|ZP_04747232.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 592

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 36/322 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           +TE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 MTERTGGSDLGALETTATRCGDA-WLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAS 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+    +GP +    
Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPQADSGPADGKGL 312

Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               ++   + L +A  +V   R +L E++ Y R+R   G  L+D+P+++R +A++ +D+
Sbjct: 313 GRMMELTNKLRLGTASFAVGNARRALVESLCYTRQRRAFGEALVDKPLIRRKLAEMIVDV 372

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL F   +       R  +A   RI  P+TK   C++     ++A+E  GG+GYIE
Sbjct: 373 EAALALIF---DGTGAPNHRQPQAIRQRIAVPVTKLRVCRLGITAASDAVELHGGNGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              +AR  R++  N+I  GS N + LDV   +E+                  + + ++  
Sbjct: 430 TWPVARILRDAQVNTIWEGSDNILCLDVRRGMEQ----------------SRAHEPLLAR 473

Query: 487 LRDSISLCKEDKGLARFLTEKI 508
           +RD++S+  +D+   R ++ +I
Sbjct: 474 MRDAVSVSDDDE-TTRLVSRRI 494


>gi|293603574|ref|ZP_06685995.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818010|gb|EFF77070.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 566

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 215/447 (48%), Gaps = 27/447 (6%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N +++D    AL   + P+ +H      LE LGE +      ELA  A+ + P L   
Sbjct: 20  GLNLFTADPYAAALSQRYLPTALHAHLLPHLERLGE-LAGGVMDELAATADKHPPTLSVR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAARLYL 142
              G    +V+ HPA+  L R +  +    ++  R       EP+    A K   + L++
Sbjct: 79  SRAGTDESRVDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPM--PAAAKYALSHLFV 136

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A+      +S + + A  +     P + +   P++ S+++D   +  M          +
Sbjct: 137 QAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDALRQGAM---------FM 187

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FL 257
           TE+  G+D++A         DG + + G KWF S+P +   ++LA+ E + G      FL
Sbjct: 188 TEQGAGSDVSATEVTATAQPDGTWRIHGDKWFCSNPDAGFAMVLARSETQPGLKGVSLFL 247

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR LEDGS N     R+K+K+G RS A+ E+       +L+G+       + DM     
Sbjct: 248 LPRDLEDGSHNHYRILRVKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMINNSR 307

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L + + +   MR ++ EA++ ++ R   G  LID P+M+R +  + +    A  + F+ A
Sbjct: 308 LSNGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARTVMFQTA 367

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +  +A     + A ARI+ P+ K+  C+ A  V  +AME  GG GYIEE +  R  R++
Sbjct: 368 RALADADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLVRDA 427

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNL 464
              SI  G+ N + LDVL  ++K  +L
Sbjct: 428 HLGSIWEGTSNIVALDVLRAIKKENSL 454


>gi|91782819|ref|YP_558025.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91686773|gb|ABE29973.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 587

 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 215/432 (49%), Gaps = 29/432 (6%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-- 134
           A+ N PQL      GE    ++ HP + AL R +  +     +   S E    KQ+    
Sbjct: 68  ADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAE---LGLAALSHETRDGKQSPPPL 124

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           ++ A  +L  Q E G     S+T +    L     P +   + P++ SR++D   +  M 
Sbjct: 125 VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPRLASRDFDTLFQGAM- 183

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV 249
                    +TE+  G+D+A I ++   +  +DG  + L G KWF S+  +D  ++LA+ 
Sbjct: 184 --------FMTEQAAGSDVARIATRASLETEADGQTWRLYGDKWFCSNADADLAMVLARP 235

Query: 250 E------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +        +G FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++ 
Sbjct: 236 DTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYLIGEVG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + DM  +  L + + +   MR +L EA+H AR R   G  LID P+M+R +  + 
Sbjct: 296 RGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQLLKMM 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           L    A ++  R+A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+
Sbjct: 356 LPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGT 415

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-- 480
           GYIEE S AR  R++   SI  G+ N + LD+    ++   L E L + L+  LG++G  
Sbjct: 416 GYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLQDLLGAAGLP 474

Query: 481 KKVITILRDSIS 492
              + +LR +++
Sbjct: 475 PASLALLRSTLA 486


>gi|221065963|ref|ZP_03542068.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710986|gb|EED66354.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 568

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 212/455 (46%), Gaps = 41/455 (9%)

Query: 33  GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N YS+DS L +L+     A+  + +   L+ +GE +      ELA +A+ N P L   
Sbjct: 28  GANFYSTDSELQSLLRLYLPADLLTHLQPYLQRMGE-LAGGRIDELAGIADRNPPTLEHR 86

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139
              G+   ++  HPA+  L R +  + GL           W     P V+        A 
Sbjct: 87  SRSGQDSQRIIKHPAYEELERIAYGEFGLQAISHRDDMLGWQGKMPPTVKY-------AL 139

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            YL  Q E G     S+T +    L    T  +   + P++ S ++D   +  M      
Sbjct: 140 TYLFVQSEFGLCCPLSMTDSLTRTLKKFGTSELVDKYLPQLLSLDWDNQAQGAM------ 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               +TE+  G+DIA   +      DG + L+G KWF S+P ++  + LA+V+G      
Sbjct: 194 ---FMTEQAAGSDIANTQTMAYPQIDGSWRLTGDKWFCSNPDAEFAMALARVDGAPAGMK 250

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+PR L+DGS N     RLK+K+G +S A+ E+       +L+G+       + D
Sbjct: 251 GISLFLLPRTLDDGSANLYRIIRLKDKMGTKSMASGEIRMEGATAYLVGEQGRGFVQIAD 310

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L + + S   MR ++AEA   A  R   G  L D P+M+R +  + +    A  
Sbjct: 311 MVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLEDMPLMQRQLDKLRVPAEQART 370

Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           + F+ A +   + +  EE AY   RI+ P+ K+  C+ A  V  +AME  GG GYIEE S
Sbjct: 371 MVFQTAQTLMRSDA-GEEGAYPLLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 429

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             R  R++   SI  G+ N + LDV+  + +  +L
Sbjct: 430 DPRLVRDAHLGSIWEGTSNIVALDVIRAIRREGSL 464


>gi|118463683|ref|YP_879516.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773280|ref|ZP_05214796.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118164970|gb|ABK65867.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 589

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 36/312 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AFI+LA+ EG       V  
Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFIVLAKPEGAPDNSRGVAN 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL     + G   D K L
Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSG-EPTDGAASDGKGL 311

Query: 316 ---------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+
Sbjct: 312 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDV 371

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   +       R       RI  P+TK   C++     ++A+E  GG+GYIE
Sbjct: 372 EAAQAMVF---DGTGATNHRQPRGMRQRIAVPVTKLRVCRLGITAASDAIEIHGGNGYIE 428

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              +AR  R++  N+I  G  N + LDV   +E+ T   E L +                
Sbjct: 429 NWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 472

Query: 487 LRDSISLCKEDK 498
           LRD++S+  +D+
Sbjct: 473 LRDAVSVADDDE 484


>gi|264679498|ref|YP_003279405.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210011|gb|ACY34109.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 569

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 40/475 (8%)

Query: 13  NQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVL 66
           +QVH  + ++ A   P P   G N Y++D  L +L+A     +  + +   L+ +GE + 
Sbjct: 7   SQVHAMAQAVRAAAHPVPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGE-LA 65

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI------ 119
                ELA +A+ N P L      G+   ++  HPA+  L R +  + GL          
Sbjct: 66  GGRIDELAGVADRNPPTLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDML 125

Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAP 176
            W     P+V+        A  +L  Q E G     S+T +    L    TP +   + P
Sbjct: 126 GWSGKMPPIVKY-------ALTFLFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLP 178

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S +++   +  M          +TE+  G+DIA   +     +DG + L+G KWF S
Sbjct: 179 QLLSLDWEKQAQGAM---------FMTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCS 229

Query: 237 SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +P ++  ++LA+VEG       +  FL+PR L+DGS N     RLK+K+G +S A+ E+ 
Sbjct: 230 NPDAEFAMVLARVEGGAPGMKGISLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIR 289

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                 +L+G+       + DM     L + + S   MR ++AEA   A  R   G  L 
Sbjct: 290 MDGAVAYLVGEQGRGFVQMADMVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLE 349

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAP 409
             P+M+R +  + +    A  + F+ A +   + +   +A A  RI+ P+ K+  C+ A 
Sbjct: 350 QMPLMQRQLDKLRVPAEQARTMVFQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDAR 409

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            V  +AME  GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 410 KVTGDAMEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAIKREGSL 464


>gi|73539259|ref|YP_299626.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72122596|gb|AAZ64782.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 597

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 214/461 (46%), Gaps = 47/461 (10%)

Query: 33  GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G + Y++D  L AL+     A+  +++   LE +GE        ELA  A+ N P L   
Sbjct: 27  GGSLYTADPDLRALLPLYLPADLLNLLQPHLERMGELA-GGVLDELALTADQNPPTLTHR 85

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139
              G    +V  HPA+  L R +  +    ++        WD+   P  +        A 
Sbjct: 86  TRSGIDQQRVHKHPAYVELERVAFSEFGLAAVSHRGGVFGWDKPMPPAAKY-------AL 138

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            Y++ Q E G     S+T +    L     P + + + P + ++ ++   +  M      
Sbjct: 139 TYMLVQAEFGLCCPLSMTDSLTRTLRKFGDPALVEKFLPNLTTQVFEDLYQGAMF----- 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254
               +TE+  G+D+AA  ++  +   ++G + LSG KWF S+P +   ++LA+VE   G 
Sbjct: 194 ----MTEQGAGSDVAATATRAMRDPQAEGGWRLSGDKWFCSNPDAALAMVLARVEDEAGN 249

Query: 255 ---------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                     FL+PR L DGS N     RLK+K+G RS A+ E+       +L+G+L   
Sbjct: 250 AVPGHKGVSLFLLPRTLSDGSANQYRIIRLKDKLGTRSMASGEIRLEGASAYLVGELGRG 309

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + DM     L + + +   MR +L E +  A  R   G  L D P+M+R +  + L 
Sbjct: 310 FVQMADMINNSRLSNGVRAAGLMRRALTEGLFIAHERKAFGKRLEDMPLMRRQLLKLTLP 369

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              A  + F+ A +   A +  E+ AY   RI+ P+ K+  C+ A  V  +AME  GG G
Sbjct: 370 TEQARTMVFQTAEALRRADA-GEDGAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCG 428

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           YIEE S AR  R++   SI  G+ N + LDVL  + +  +L
Sbjct: 429 YIEEWSDARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 469


>gi|167570574|ref|ZP_02363448.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 591

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 221/449 (49%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A +   +  EL  LG    S     LA  A+ N P LH 
Sbjct: 25  GVNFFTSDPDCAALLRLHLGDARY-RALEPELRALGLRA-SDELDRLASRADKNPPVLHP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP + AL R +  + GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D  ++  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++   +  +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLSKADAGDEQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|316935141|ref|YP_004110123.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602855|gb|ADU45390.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 595

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 215/455 (47%), Gaps = 50/455 (10%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y +D  L  L+  + P      +   L+ LG  +      + AR+A+ +TP 
Sbjct: 24  PDTTGLNFYRADPSLADLLRIHLPKALVDHIEPHLDALGA-LAGGRLDDCARLADRHTPI 82

Query: 84  LHAYGPGGERWDKVEFHPAW-------------HALL-RRSIHDGLHCSIWDRSFEPVVR 129
           LH     G     VE+HPA+             HAL  R+ I D      W   + PV  
Sbjct: 83  LHQRDRFGRDVQSVEYHPAYRELENAAFGTFGIHALSHRKGIMD------WPEVY-PVTA 135

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           K A  +      L  + E G     +VT      L       K  + ++ ++  D   + 
Sbjct: 136 KHAFTL------LFNETEFGMGCPINVTDGCAKLL------SKFGSDELKAKYLDGLTQT 183

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLAQ 248
            M K +   G  +TEK GG+D+  +TS    +S+G +  L G KWF S+  +   ++LA+
Sbjct: 184 DMSKLTQG-GQFMTEKEGGSDVGTLTSIA--VSEGDHWRLYGEKWFCSNADAKVVMLLAR 240

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            EG       VG FL+PR L+DG+PN     RLK+K+G RS A+ E++      + +G L
Sbjct: 241 PEGAGPGTRGVGLFLMPRFLDDGTPNHYRIVRLKDKLGTRSMASGEIKLEGAVAYAVGKL 300

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +     + +M     L + + S + MR +  +AI  A  R V G  +ID P+ +R +  I
Sbjct: 301 DRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIIDLPLARRQLMKI 360

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            L      ++SF  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG
Sbjct: 361 LLPTEQGMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGG 420

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GY+EE + AR  R++   SI  G+GN + +D L 
Sbjct: 421 IGYVEEFATARLLRDAHLGSIWEGTGNIVAIDALK 455


>gi|41406322|ref|NP_959158.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394670|gb|AAS02541.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 589

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 36/312 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFVVLAKPEGAPDNSRGVAN 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL     + G   D K L
Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSG-EPTDGAASDGKGL 311

Query: 316 ---------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+
Sbjct: 312 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDV 371

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F   +       R       RI  P+TK   C++     ++A+E  GG+GYIE
Sbjct: 372 EAAQAMVF---DGTGATNHRQPRGMRQRIAVPVTKLRVCRLGITAASDAIEIHGGNGYIE 428

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              +AR  R++  N+I  G  N + LDV   +E+ T   E L +                
Sbjct: 429 NWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 472

Query: 487 LRDSISLCKEDK 498
           LRD++S+  +D+
Sbjct: 473 LRDAVSVADDDE 484


>gi|91978083|ref|YP_570742.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684539|gb|ABE40841.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 618

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 214/456 (46%), Gaps = 52/456 (11%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPS--VVHKE--LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y +D  L  L+  + P   V H E  L+ LG    S    E AR A+ +TP 
Sbjct: 47  PDTTGLNFYRADPSLADLLRIHLPDALVRHIEPHLDRLGGLAGSVL-DEYARAADRHTPI 105

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135
           LH     G     VE+HPA+  L   +    G+H          W   + PV  K A  +
Sbjct: 106 LHQRDRFGRDAQYVEYHPAYRELENAAFGAFGIHALSHRQGIMGWPDVY-PVTAKHAFTL 164

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP----M 191
                 L  + E G               M  P    D   K+ S+  D   KA     +
Sbjct: 165 ------LFNEAEFG---------------MGCPINVTDGCAKLLSKFGDDALKAKYLDGL 203

Query: 192 QKTSVAI----GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
            +T +A     G  +TEK GG+D+  +T+   +  D  + L+G KWF S+  +   ++LA
Sbjct: 204 TQTDMARLTQGGQFMTEKEGGSDVGTLTTVATRDGDH-WRLTGEKWFCSNADAKIVMLLA 262

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           + EG       VG FL+PR L+DGSPN     RLK+K+G RS A+ E++      + +G 
Sbjct: 263 RPEGAGRGTRGVGLFLMPRFLDDGSPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGR 322

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L+     + +M     L + + S + MR +  +AI  A+ R V G  ++D P+ +R +  
Sbjct: 323 LDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVAKHRVVFGQRIVDLPLARRQLMK 382

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           I L      ++SF  A++ D A++ S++ AA  RI+ P  K+   + A     +A+E  G
Sbjct: 383 ILLPTEQGMSISFLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKACGDALEMRG 442

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+EE + AR  R++   SI  G+GN + LD L 
Sbjct: 443 GIGYVEEFATARLLRDAHLGSIWEGTGNIVALDALK 478


>gi|213023909|ref|ZP_03338356.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 203

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 121/200 (60%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A+ + L   P    DW   + S  YD       QK  + IG+G+TEK+GG+D+ + T+ 
Sbjct: 4   AATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVLSNTTH 63

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +RLK+
Sbjct: 64  AERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKD 123

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + AI+
Sbjct: 124 KLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIY 183

Query: 338 YARRRHVSGGILIDQPVMKR 357
           +A +R   G  LI+QP+M++
Sbjct: 184 HAHQRQAFGKPLIEQPLMRQ 203


>gi|121608848|ref|YP_996655.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553488|gb|ABM57637.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 581

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 48/470 (10%)

Query: 33  GMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N ++SD+ L  L+A +  P ++       E LG  +       LA++A+ N P+L   
Sbjct: 15  GQNLFTSDTQLHGLLALYLPPDLLRHMQPHFERLGA-LAGGRLDALAQVADQNPPRLEHR 73

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139
              G    ++  HPA+  + R +  + GL           W     P+V+          
Sbjct: 74  TRTGIDAQRIVKHPAYVEMERMAFSEFGLAAMSHRQETLGWKGRMPPIVKYLL------- 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            YL  Q E G L  P   S S+   +    +P +   + P++ + ++D   +  M     
Sbjct: 127 TYLFVQAEFG-LCCPVSMSDSLARTLGKFGSPELIGRFLPRLQALDFDQLAQGAM----- 180

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---- 252
                +TE+  G+DIAA  ++  +   G++ LSG KWF S+P +D  ++LA+ +      
Sbjct: 181 ----FMTEQAAGSDIAATQTRAWQDGQGLWRLSGDKWFCSNPDADLAMVLARPDAAPAGM 236

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G        + 
Sbjct: 237 QGLSLFLLPRRLEDGSANHYRIIRLKDKLGTRSMASGEIRLEGAVAYLVGQAGRGFQQMA 296

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           DM     L + + +   MR +LAEA   A  R   G  L D P+M+R +  + L    A 
Sbjct: 297 DMVNNSRLSNGVRAAGLMRRALAEAEFIASERLAFGQRLADMPLMQRQLDKLRLPTEQAR 356

Query: 371 ALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           ++ F+ A +   A    +  AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE 
Sbjct: 357 SMVFQTAQALARADG-GDAGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEW 415

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           S  R  R++   SI  G+ N + LDV+  + +     EQ    L++  G+
Sbjct: 416 SDPRLVRDAHLGSIWEGTSNIVALDVMRAIRR-----EQALPALQRHFGA 460


>gi|260903971|ref|ZP_05912293.1| putative acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 570

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 215/467 (46%), Gaps = 42/467 (8%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQE----LARMANYNTPQLHAYGP 89
           MN    D  L  LI ++     +EL       L   A +    LA +A+ N P+L  +  
Sbjct: 1   MNYVDLDPALQPLIESYLESADRELLAPVLTALGADAAQRLAPLADVADKNPPRLEQFNR 60

Query: 90  GGERWDKVEFHPAWHALLRRSI---------HDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            G+R D +++H ++  L + +          H GLH   WD    P      H ++    
Sbjct: 61  EGDRVDTIDYHHSYQELQKAAYEEYGLSALSHRGLHG--WD-DVPP------HLVKYILS 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y+  Q E G     S+T A+   L       +  +   ++ S + D      M       
Sbjct: 112 YVFVQAEFGLACPVSMTDAAARTLRKFGDGEQIAEAIDRLISTDSDHRFTGAM------- 164

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------R 252
              +TE   GTDIA  ++  ++  +  + LSG KWF S+P +D  + LA+  G       
Sbjct: 165 --FMTEIHAGTDIAQTSTVAERDGEN-WALSGRKWFASNPDADIILTLARFPGGDDTTRG 221

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VG F++P+   DG+ N     RLK+K+G RS  + E+  +  +   +G L      + +M
Sbjct: 222 VGLFMLPKHRPDGTKNSYVIDRLKDKLGTRSMPSGEVTLNGAYAVQVGALERGFLQMAEM 281

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L +A+ + + MR S+ EA+ +AR+R V G  LI+ P+M+  +  +  +  AA  L
Sbjct: 282 VNTSRLSNAMRATALMRRSINEALAHARQRVVFGKALIEAPLMRMTLLPLQAEAEAALGL 341

Query: 373 SFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            F   +   +A +    AA   R++ P+ K++ CK A  V  EAME  GG GYIEE   A
Sbjct: 342 VFYAGDMLQKADAGDASAAAQIRVLTPLAKHYICKRARFVTGEAMEVRGGRGYIEEFPDA 401

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           R  R+S   SI  GS N + LDVL  + K  N  + L  T+ Q L +
Sbjct: 402 RLVRDSHLGSIWEGSSNVIALDVLRCIRK-QNTHQLLAETMTQKLNT 447


>gi|254503869|ref|ZP_05116020.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439940|gb|EEE46619.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 595

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 206/442 (46%), Gaps = 32/442 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y  D  L  L++ + P  +   LE   E   +    E+   +RMA+ + P LH   
Sbjct: 25  GLNFYGIDKSLEDLVSLYLPDDLRAHLEPHLEKFGALVGDEVDDWSRMADKHIPVLHHRD 84

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P G   D +EFHPA+  +   ++ D GL   I         +  +H ++    Y+  Q E
Sbjct: 85  PRGRFEDWIEFHPAYRNMEDVALGDYGLAAMIHKPGMFGWDKPMSHTVKFIFQYIFGQSE 144

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G L   S T        TT  + KD+  +     +     +   KT +     +TE+ G
Sbjct: 145 FGQLCPISATE-------TTATLIKDYGDEATKARFYDGLTSQDTKTMLKGAQFMTERPG 197

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           G+D++ I  +  +  DG + L G KWF S    D  ++LA+ +G       +G F +PR 
Sbjct: 198 GSDVSNIQLEA-RFEDGNWKLYGEKWFCSCTDGDVALLLARPQGAPAGNKGLGLFALPRR 256

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L+DGS N     RLKNK+G+RS A+ E+ F     + LG++    GP E+  + + +D  
Sbjct: 257 LDDGSRNSYRIVRLKNKLGSRSMASGEIVFDGAVAYPLGEV----GPHENKGLKMMMDQV 312

Query: 322 IMS--------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +S         + MR  L EA+  A+ RH     +ID+P+++R +  + +    A +++
Sbjct: 313 SLSRLSHGCRAAAMMRRCLNEALVTAQNRHAFQEKIIDKPLLRRQLMKLMVPTEQALSIT 372

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             L N    A++  E A    RI+ P  KY   +    V   AME  GG+GYIE+   AR
Sbjct: 373 LYLGNQISLAEAGDERAQKITRILTPAHKYRTARDNVRVATGAMEVRGGNGYIEDFVNAR 432

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R++    +  G+ N   LD+
Sbjct: 433 LVRDAHLGVLWEGTSNINSLDI 454


>gi|239815089|ref|YP_002943999.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239801666|gb|ACS18733.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 569

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 219/472 (46%), Gaps = 41/472 (8%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDS-----LLVALIANFPSVVHKELELLGEYVLSCTA 70
           H   D   A++  P   G + Y+ D+     L V L A+  + +    E LG  +     
Sbjct: 4   HAAIDGGTAVHPVPDRHGRSLYAEDAELHRLLAVYLPADLLAHMRPHFERLGT-LAGGRL 62

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDR 122
            ELA  A+ N P L      G    +V  HPA+  + R ++ + GL           W  
Sbjct: 63  DELAHTADRNPPTLTLRTRTGIDDPQVHKHPAYVEMERLALSEFGLAAMSHREDTLGWKG 122

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFS 180
              P+V+           YL  Q E G     S+T   A  +    +P + + + P+  S
Sbjct: 123 RMPPLVKY-------VLTYLFVQAEFGLCCPVSMTDSLARTLKKFGSPELVERFLPRFQS 175

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++D   +  M          +TE+  G+DIAA  ++  +   G + L+G KWF S+P +
Sbjct: 176 LDFDMLAQGAMF---------MTEQAAGSDIAATETRAWQDEQGQWRLAGDKWFCSNPDA 226

Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           D  ++LA+V+G       V  FL+PR L+DGS N     RLK+K+G RS A+ E+     
Sbjct: 227 DFAMVLARVDGGPPGMKGVSLFLLPRRLDDGSANRYRILRLKDKLGTRSMASGEIRLEGA 286

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G+       + DM     L + + +   MR ++AEA + A  R   G  L D P+
Sbjct: 287 LAYLVGEQGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAHERRAFGRRLEDMPL 346

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVI 412
           M+R +  + L    A ++ F+ A +   + S  E  AY   RI+ P+ K+  C+ A  V 
Sbjct: 347 MQRQLDKLRLPAEQARSMLFQTAQALARSDS-GESTAYPLLRILTPLIKFRACRDARKVT 405

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +AME  GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 406 GDAMEVRGGCGYIEEWSDPRLLRDAHLGSIWEGTSNIVALDVIRAVKREGSL 457


>gi|167567257|ref|ZP_02360173.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 589

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 220/449 (48%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A +   +  EL  LG    S     LA  A+ N P LH 
Sbjct: 23  GVNFFTSDPDCAALLRLHLGDARY-RALEPELRALGLRA-SDELDRLASRADKNPPVLHP 80

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP + AL R +  + GL   S  D +  P+V+        A  +L  
Sbjct: 81  RTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 133

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D  ++  M          +
Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF---------M 184

Query: 203 TEKRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++   +  +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 185 TEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVKG 244

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMADM 304

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARSL 364

Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 365 FMQIALLLSKADAGDGQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453


>gi|319762662|ref|YP_004126599.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824803|ref|YP_004388106.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|317117223|gb|ADU99711.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310175|gb|AEB84590.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 568

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 215/454 (47%), Gaps = 41/454 (9%)

Query: 34  MNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           +N Y+ D  L +L+A + P+ +H  L    E +GE +      + A+ A+ N P L    
Sbjct: 28  VNYYTGDGELQSLLALYLPADLHAHLQPYFERMGE-LAGGAVDDWAQEADRNPPTLEMRS 86

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARL 140
             G+   ++  HPA+  + + +       +I        W     P+V+        A  
Sbjct: 87  RAGKEQQRIVKHPAYVEMEKVAFQQFGLAAISHREDMLGWKGKMPPIVKY-------ALT 139

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL  Q E G     S+T +    L     P +   + P++ + ++D         +SV  
Sbjct: 140 YLFVQSEFGLCCPLSMTDSLTRTLKKYGAPELVNKYLPRLLAMDFD---------SSVQG 190

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
            + +TE+  G+DIA   +      DG + L G KWF S+P +   ++LA+V+G       
Sbjct: 191 SMFMTEQAAGSDIANTLTMAYPQEDGSWRLYGEKWFCSNPDAGFSMVLARVDGGPPGMKG 250

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+PR+ +DGS N     RLK+K+G RS A+ E+       +L+G+       + DM
Sbjct: 251 ISLFLLPRIKDDGSTNHYHIVRLKDKMGTRSMASGEIRMEGAVAYLVGEQGRGFVQIADM 310

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L + + S   MR ++AEA   AR R   G  L D P+M+  +  + +    A  +
Sbjct: 311 VNNSRLSNGMRSAGMMRRAVAEAEFIARERWAFGRRLQDLPLMRVQLDKLRVPAEQARTM 370

Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            F+ A +   + +  +++AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE + 
Sbjct: 371 VFQTAATLARSDA-GDKSAYALLRILTPMIKFRACRDARKVAGDAMEVRGGCGYIEEWAD 429

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 430 PRLVRDAHLGSIWEGTSNIVALDVVRAIKREGSL 463


>gi|78066938|ref|YP_369707.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77967683|gb|ABB09063.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 583

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 224/466 (48%), Gaps = 42/466 (9%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++ D  L AL+  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV-SGELDEWASRADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              GE   +++  PA+ AL R +  + GL   S    S  P+V+        A  +L  Q
Sbjct: 79  NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGSESVPPLVKY-------ALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G     S+T +    L     P +   + P + SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDFDTLYQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           E+  G+D+A I ++  + +D     ++ L+G KWF S+  +D  ++LA+ +G       +
Sbjct: 183 EQAAGSDVARIATRATRETDALGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM 
Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+ 
Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLLKMLLPAEAARAMF 362

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR
Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
             R++   SI  G+ N + LDV    ++     EQ    L   LG 
Sbjct: 423 VVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALRAFLGD 463


>gi|220920693|ref|YP_002495994.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945299|gb|ACL55691.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 564

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 213/458 (46%), Gaps = 48/458 (10%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELE--------LLGEYVLSCTAQELARMANYNTPQ 83
           G+N Y +D    AL   + P  + + L+        L G ++      ELA  A+ N P 
Sbjct: 16  GLNLYRADRDAAALFGFYMPDTLFRHLDPHLDRLGALAGGHL-----DELAATADRNPPT 70

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAA 138
           L      GE    VE HPA+  + R +  +    ++  R       EP++    + +   
Sbjct: 71  LRLRRRTGEDCAIVEKHPAYVEMERLAYAEFGLAALSHRGGVLGWPEPMLPAAKYAL--- 127

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA--PKIFSR----EYDPTNKAPMQ 192
             YL  Q E G     S+T +    L  T + + D A   + FSR    ++D   +  M 
Sbjct: 128 -TYLFVQAEFGLCCPVSMTDS----LTRTLKRYGDPALVERFFSRLTSLDFDTLAQGAMF 182

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-- 250
                    +TE+  G+D+AA T++ ++ +DG + L+G KWF S+  +D  ++LA+ E  
Sbjct: 183 ---------MTEQGAGSDVAATTTRAEEQADGTWRLTGDKWFCSNADADLAMVLARSEPV 233

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                V  FL+P+   DG PN     RLK+K+G RS A+ E+       +L+G+      
Sbjct: 234 SGLKGVSLFLLPKQRRDGLPNDFRILRLKDKLGTRSMASGEIRLEGAEAYLVGERGRGFH 293

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM     L + + +   MR +  EA+  A RR   G  LI  P+M+R +A + +   
Sbjct: 294 QMADMINNSRLSNGVRAAGLMRRAATEALFIACRRQAFGRPLIALPLMRRQLAKMLVWTE 353

Query: 368 AATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  + F  A++   A     EAA   RI+ P+ K+  C+ A  V  +AME  GG GYIE
Sbjct: 354 QARTMVFLTADALHRANGGDPEAARLTRILTPLIKFRACRDARRVTGDAMEVRGGCGYIE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E S  R  R++   SI  G+ N + LDVL  + + T L
Sbjct: 414 EWSDPRLVRDAHLGSIWEGTSNIVALDVLRAITRDTAL 451


>gi|311104130|ref|YP_003976983.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758819|gb|ADP14268.1| acyl-CoA dehydrogenase, middle domain protein 3 [Achromobacter
           xylosoxidans A8]
          Length = 566

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 209/445 (46%), Gaps = 23/445 (5%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N +S+D    AL   + P+ +H      LE LG  +      ELA  A+ + P L   
Sbjct: 20  GQNLFSADPYAEALSRRYLPAALHAHLLPHLERLGA-LAGGVMDELAATADKHPPTLSVR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVVRKQAHKIRAARLYLMA 144
              G    +++ HPA+  L R +  +    ++  R      P     A K   + L++ A
Sbjct: 79  SRAGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPMPAAAKYALSHLFVQA 138

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +      +S + + A  +     P + +   P++ S+++D   +  M          +TE
Sbjct: 139 EFGLCCPVSMTDSLARTLRKFGDPELVERVLPEVTSQDFDTLRQGAM---------FMTE 189

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FLVP 259
           +  G+D++A         DG + + G KWF S+P +   ++LA+ E + G      FL+P
Sbjct: 190 QGAGSDVSATEVTATAQDDGTWLIHGDKWFCSNPDAGYAMVLARSEAQPGLKGVSLFLLP 249

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R L DGS N     RLK+K+G RS A+ E+       +L+G+       + DM     L 
Sbjct: 250 RDLADGSHNHYRILRLKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMINNSRLS 309

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           + + +   MR ++ EA++ ++ R   G  LID P+M+R +  + +    A ++ F+ A +
Sbjct: 310 NGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARSVMFQTARA 369

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              A     + A ARI+ P+ K+  C+ A  V  +AME  GG GYIEE +  R  R++  
Sbjct: 370 LAGADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLVRDAHL 429

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464
            SI  G+ N + LDVL  + K  +L
Sbjct: 430 GSIWEGTSNIVALDVLRAINKENSL 454


>gi|296387903|ref|ZP_06877378.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 575

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 214/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E++ +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLEWLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL R +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|192290292|ref|YP_001990897.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284041|gb|ACF00422.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 595

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 211/449 (46%), Gaps = 38/449 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y +D  L  L+  + P+     +   L+ LG  +      E AR+A+ +TP 
Sbjct: 24  PDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGA-LAGGRLDECARLADRHTPI 82

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135
           LH     G     VE+HPA+  L   +    G+H          W   + PV  K A  +
Sbjct: 83  LHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVY-PVTAKHAFTL 141

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                 L  + E G     +VT      L        D A K  ++  D   +  M K +
Sbjct: 142 ------LFNETEFGMGCPINVTDGCAKLLSK----FGDEALK--AKYLDGLTQTDMSKLT 189

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
              G  +TEK GG+D+  +TS    + DG  + L G KWF S+  +   ++LA+ EG   
Sbjct: 190 QG-GQFMTEKEGGSDVGTLTSVA--VPDGDHFRLYGEKWFCSNADAKVVMLLARPEGAGP 246

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               VG FL+PR L+DG PN     RLK+K+G RS A+ E++      + +G L+     
Sbjct: 247 GTRGVGLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 306

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     L + + S + MR +  +AI  A  R V G  ++D P+ +R +  I +    
Sbjct: 307 MAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQ 366

Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             ++SF  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE
Sbjct: 367 GMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEE 426

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
            + AR  R++   SI  G+GN + +D L 
Sbjct: 427 FATARLLRDAHLGSIWEGTGNIVAIDALK 455


>gi|39934769|ref|NP_947045.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39648619|emb|CAE27140.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 595

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 211/449 (46%), Gaps = 38/449 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y +D  L  L+  + P+     +   L+ LG  +      E AR+A+ +TP 
Sbjct: 24  PDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGA-LAGGRLDECARLADRHTPI 82

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135
           LH     G     VE+HPA+  L   +    G+H          W   + PV  K A  +
Sbjct: 83  LHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVY-PVTAKHAFTL 141

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                 L  + E G     +VT      L        D A K  ++  D   +  M K +
Sbjct: 142 ------LFNETEFGMGCPINVTDGCAKLLSK----FGDEALK--AKYLDGLTQTDMSKLT 189

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
              G  +TEK GG+D+  +TS    + DG  + L G KWF S+  +   ++LA+ EG   
Sbjct: 190 QG-GQFMTEKEGGSDVGTLTSVA--VPDGDHFRLYGEKWFCSNADAKVVMLLARPEGAGP 246

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               VG FL+PR L+DG PN     RLK+K+G RS A+ E++      + +G L+     
Sbjct: 247 GTRGVGLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 306

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     L + + S + MR +  +AI  A  R V G  ++D P+ +R +  I +    
Sbjct: 307 MAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQ 366

Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             ++SF  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE
Sbjct: 367 GMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEE 426

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
            + AR  R++   SI  G+GN + +D L 
Sbjct: 427 FATARLLRDAHLGSIWEGTGNIVAIDALK 455


>gi|183985329|ref|YP_001853620.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M]
 gi|183178655|gb|ACC43765.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M]
          Length = 598

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 228/492 (46%), Gaps = 62/492 (12%)

Query: 32  IGMNAYSSDSLLVALIANF--P---SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y +D  L + +A +  P   +VV   L   GE +    A+  A   + + P+L  
Sbjct: 36  VGLNWYLTDPTLRSTVAYYLQPDELAVVEPHLIRAGELMGGAVAR-WAEETDRDPPRLQR 94

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    ++   PA     +R++ D    ++ D +    +R       A+  YL+ Q 
Sbjct: 95  YDRWGHDVSRI-VMPASFTQSKRAVLDA-QAALRDEARGAGMRPTVALFAAS--YLLNQA 150

Query: 147 EAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           + G    L + +    S+VA      V      K  S E+     A +          LT
Sbjct: 151 DIGMGCALGTGAGMVQSLVAAFAPADVRDHVLAKFDSGEW-AGETAQL----------LT 199

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+    AF++LA+ EG       V  FL
Sbjct: 200 ERTGGSDLGALETTATRDGDS-WRLNGFKWFASNCAGQAFVVLAKPEGAPDTTRGVANFL 258

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNVSTGP----- 308
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL           GP     
Sbjct: 259 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSAEPSGPQALAGPSGGRG 318

Query: 309 ---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + ++     L  A  ++   R +L E++ YAR+R   GG LID+P+M+R +A++ +D
Sbjct: 319 LARMMELTNAARLGIASFALGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVD 378

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L F   +    A  R       RI  P+TK   C++  +  ++A+E  GG+GY+
Sbjct: 379 VEAAQTLVF---DGLGVANHRQPRTIRQRIAVPVTKLKVCRLGISAASDAIEIHGGNGYV 435

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           E   +AR  R++  N+I  G  N + LDV   +E+ T+  E L +               
Sbjct: 436 ENWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TSAHETLLAR-------------- 480

Query: 486 ILRDSISLCKED 497
            LRD++S+   D
Sbjct: 481 -LRDAVSVADRD 491


>gi|115352248|ref|YP_774087.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115282236|gb|ABI87753.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 584

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 232/485 (47%), Gaps = 39/485 (8%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66
           MN   +  D+  + N P    G+N +++D  L AL+     A   + +  +L  LG  V 
Sbjct: 1   MNDTARTPDAGASGNIPD-SRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S    E A  A+ + P L      GE   +++  PA+ AL R +  +     +   S +P
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAE---LGLAALSHQP 115

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
                A  ++ A  +L  Q E G     S+T +    L     P + + + P++ SR++D
Sbjct: 116 --DAVAPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPRLASRDFD 173

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMS 240
              +  M          +TE+  G+D+  I ++  + +    + ++ L G KWF S+  +
Sbjct: 174 TLFQGAMF---------MTEQAAGSDVGRIATRAVRDTHTSGEAVWRLYGDKWFCSNADA 224

Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+     
Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYGIVRLKDKLGSRSMASGEIALEGA 284

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G++      + DM  +  L + + +   MR +L E++H A  R   G  LI+ P+
Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMPL 344

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413
           M+R +  + L   AA A+  ++A    EA +  E+AA   RI+ P+ K+  C+ A  V  
Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPEADAGDEQAARCVRILTPLIKFRACRDARRVTG 404

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++     EQ    L 
Sbjct: 405 DAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALR 459

Query: 474 QDLGS 478
             LG 
Sbjct: 460 TFLGD 464


>gi|254247749|ref|ZP_04941070.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124872525|gb|EAY64241.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 583

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 225/465 (48%), Gaps = 34/465 (7%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++ D  L AL+  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTVDPDLGALLKLHLGDAHYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              GE   +++  PA+ AL  R  +  L  +    S E V       ++ A  +L  Q E
Sbjct: 79  NRRGEAVQRIDKDPAYVAL-ERVAYAELGLASLSHSAETV----PPLVKYALTFLFVQAE 133

Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T +    L     P +   + P++ SR++D   +  M          +TE+
Sbjct: 134 FGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDFDTLYQGAMF---------MTEQ 184

Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
             G+D+  I ++    +D     ++ L+G KWF S+  +D  ++LA+ +G       +  
Sbjct: 185 AAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGLAL 244

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 245 FLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMINM 304

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+  +
Sbjct: 305 SRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMPLMQRQLMKMLLPAEAARAMFMQ 364

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR  
Sbjct: 365 IALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARLV 424

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           R++   SI  G+ N + LDV    ++  +  + L + L   LG++
Sbjct: 425 RDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468


>gi|15598789|ref|NP_252283.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9949748|gb|AAG06981.1|AE004779_13 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 575

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL R +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|107103107|ref|ZP_01367025.1| hypothetical protein PaerPA_01004176 [Pseudomonas aeruginosa PACS2]
 gi|254236509|ref|ZP_04929832.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719]
 gi|126168440|gb|EAZ53951.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719]
          Length = 575

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL R +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|116051591|ref|YP_789571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115586812|gb|ABJ12827.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 575

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL R +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|259415587|ref|ZP_05739508.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259348817|gb|EEW60579.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 577

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 221/476 (46%), Gaps = 29/476 (6%)

Query: 29  PLFIGMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
           P   G+NA+ +D  L  L       A++   +  EL+ +G   L+   +ELA  A+ N P
Sbjct: 10  PDSAGLNAFDADRALQDLAWLYLEKADYTRAL-PELQRMGS--LTQQLEELALTADKNPP 66

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            L      G   +++  HPA+  L R +  + GL              K    ++ A +Y
Sbjct: 67  TLQIRARNGADLERIHKHPAYVELERYAFGEFGLAAMSHRGGVFGAPDKLPPMVKYALVY 126

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L  Q E G     S+T +    L+      K  + ++ +  +D      M  T     + 
Sbjct: 127 LFVQAEFGLCCPLSMTDSLTRTLV------KFGSEELVNTYFDQLTSQDMD-TVFQGAMF 179

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           +TE+  G+D+ AI +   ++ DG + L G KWF S+P +   ++LA+ EG       +  
Sbjct: 180 MTEQAAGSDVGAIDTTA-RLEDGEWKLYGDKWFCSNPDAALGMVLARPEGGDAGTRGLSL 238

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+PR L DGS N     RLK K+G +S A+ E+       +L+GD       + DM  +
Sbjct: 239 FLLPRTLPDGSKNAYRILRLKEKMGTKSMASGEITLDGATAYLVGDPGQGFKQMTDMINM 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + S   MR +++EA+  ++ R   G  LID P+M+R +  + +      ++ F 
Sbjct: 299 SRLANGVRSAGLMRRAVSEALFISKNRTAFGKRLIDLPLMRRQLMKMLVTAEQGRSMVFH 358

Query: 376 LANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A     + +  ++ A   RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR  
Sbjct: 359 TAKVLQASDAGDAKMAKVLRILTPLIKFRTCRDARKVAGDAMEVRGGCGYIEEWSDARVL 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF---STLEQDLGSSGKKVITIL 487
           R++   SI  G+ N + LDV     +   L + LF   STL  +  S G  V  IL
Sbjct: 419 RDAHLGSIWEGTSNIVALDVARATRREGAL-DALFDYCSTLLTEAASKGLMVGDIL 473


>gi|241663140|ref|YP_002981500.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240865167|gb|ACS62828.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 587

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 201/420 (47%), Gaps = 28/420 (6%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +L+ LG+ V S      A  A++N PQL      GE    ++ HP + AL R +   
Sbjct: 50  LEPQLKSLGQRV-SDELDAWAISADHNPPQLRHRTRRGEALQTIDKHPDYVALERVA--- 105

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
             +  +   S   V       ++ A  YL  Q E G     S+T +    L     P + 
Sbjct: 106 --YAELGLASMSHVGNASPPLVKYALTYLFVQAEFGLCCPVSMTDSLTRTLRKFGDPALL 163

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGI--YC 227
             + P + SR++D   +  M          +TE+  G+D+A I ++   +   DG   + 
Sbjct: 164 ARYLPMLASRDFDVLYQGAM---------FMTEQAAGSDVARIATRAALETAPDGTQTWR 214

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           L G KWF S+  +D  ++LA+ +G       +  FL+P+ L DGS N     RLK+K+G 
Sbjct: 215 LYGDKWFCSNADADLAMVLARPDGAPSGINGLALFLLPKTLRDGSRNHYRIVRLKDKLGT 274

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           RS A+ E+       +L+G++      + DM  +  L + + +   MR +  EA+H AR 
Sbjct: 275 RSMASGEIALEGATAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHIARN 334

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPIT 400
           R   G  LID P+M+R +  + L    A ++  ++A     A +   +AA   RI+ P+ 
Sbjct: 335 REAFGRKLIDMPLMQRQLLKMLLPTEQARSMFMQIAQLLPLADAGDAQAAKCVRILTPLI 394

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K+  C+ A  V  +AME  GG+GYIEE S AR  R++   SI  G+ N + LD+   +++
Sbjct: 395 KFRACRDARRVTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAVKR 454


>gi|317402306|gb|EFV82883.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 566

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 216/463 (46%), Gaps = 28/463 (6%)

Query: 18  PSDSLFALNQP-PLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQ 71
           P+    A   P P   G+N + +D     L   + P+ +H      L+ LGE +      
Sbjct: 4   PAQPAVATATPVPDARGLNLFRADPYAAPLARRYLPAALHAHLLPHLDRLGE-LAGGVMD 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EP 126
           ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R       EP
Sbjct: 63  ELAATADKHPPTLSVRSRAGADESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEP 122

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +    A K   + L++ A+      +S + + A  +     P + +   P++ S+++D  
Sbjct: 123 M--PAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDAL 180

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            +  M          +TE+  G+D++A      +  DG + + G KWF S+P +   ++L
Sbjct: 181 RQGAMF---------MTEQGAGSDVSATEVTATRQDDGSWRIHGDKWFCSNPDAGFAMVL 231

Query: 247 AQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           A+ E   G      FL+PR L DG+ N     RLK+K+G RS A+ E+       +L+G+
Sbjct: 232 ARSESEPGLKGVSLFLLPRDLADGTHNHYRILRLKDKLGTRSMASGEIRLEGAVAWLVGE 291

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + DM     L + + +   MR ++ EA + ++ R   G  LID P+M+R +  
Sbjct: 292 RGKGFKHMADMINNSRLSNGMRAAGLMRRAVTEATYVSQHRRAFGKRLIDMPLMQRQLVK 351

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +    A ++ F+ A +  +A     + A ARI+ P+ K+  C+ A  V  +AME  GG
Sbjct: 352 MTVWSEQARSVMFQTARALADADQGRGDPALARILTPLIKFRACRDARKVTGDAMEVRGG 411

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GYIEE +  R  R++   SI  G+ N + LDVL  + K  +L
Sbjct: 412 CGYIEEWTEPRLVRDAHLGSIWEGTSNIVALDVLRAIRKEGSL 454


>gi|313108949|ref|ZP_07794925.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310881427|gb|EFQ40021.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 575

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 205/435 (47%), Gaps = 28/435 (6%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLVPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL R +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDV 454
            SI  G+ N + LDV
Sbjct: 425 GSIWEGTSNIVALDV 439


>gi|107028660|ref|YP_625755.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116690181|ref|YP_835804.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105897824|gb|ABF80782.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116648270|gb|ABK08911.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 583

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 38/467 (8%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++ D  L AL+  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              GE   +++  PA+ AL R +  + GL   S    +  P+V+        A  +L  Q
Sbjct: 79  NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G     S+T +    L     P +   + P++ SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPTLVARYLPRLASRDFDTLYQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           E+  G+D+  I ++    +D     ++ L+G KWF S+  +D  ++LA+ +G       +
Sbjct: 183 EQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM 
Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+ 
Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR
Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             R++   SI  G+ N + LDV    ++  +  + L + L   LG++
Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468


>gi|319796278|ref|YP_004157918.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598741|gb|ADU39807.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 573

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 211/455 (46%), Gaps = 41/455 (9%)

Query: 33  GMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N +++D+ L  L+A     +  + +    E LG  +      ELA  A+ N P L   
Sbjct: 23  GQNLFTADTALHDLLALYLPDDLRAHMQPHFERLGG-LAGGQLDELAGTADRNPPTLKQR 81

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139
              G    KV  HPA+  + R ++ +    +I        W     P+V+          
Sbjct: 82  TRTGLDEQKVVKHPAYVEMERLALREFGLAAISHRDETLGWKGKMPPLVKY-------VL 134

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            YL  Q E G     S+T +    L     P +   + P++ S ++D   +  M      
Sbjct: 135 TYLFVQAEFGLCCPVSMTDSLTRTLKKFGDPELVARFLPRLTSLDFDELAQGAMF----- 189

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               +TE+  G+DIAA  +  ++ +DG + ++G KWF S+P +D  ++LA+ E       
Sbjct: 190 ----MTEQAAGSDIAATATMARREADGSWRITGDKWFCSNPDADFAMVLARAEDGAAGMK 245

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G+       + D
Sbjct: 246 GVSLFLLPRQLEDGSLNHYRIIRLKDKLGTRSMASGEIRLEGAVAYLVGEEGRGFVQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     L + + +   MR ++AEA + A  R   G  L   P+M+R +  + L    A  
Sbjct: 306 MVNNSRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQRQLDKLRLPAEQART 365

Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +  + A +   + +  E  AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S
Sbjct: 366 MVCQTALALARSDA-GEPDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 424

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 425 DPRLVRDAHLGSIWEGTSNIVALDVIRAVKREGSL 459


>gi|167589972|ref|ZP_02382360.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 586

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 38/467 (8%)

Query: 33  GMNAYSSD-SLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N +++D  L V L  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTADPDLGVLLRLHLGDARYAELEPQLHALGARV-SGELDEWAACADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQ 145
              GE   +++ HPA+ AL R +  + GL      R    P+V+        A  +L  Q
Sbjct: 79  NRRGEPVQRIDKHPAYVALERVAYAELGLASLSHQRVPASPLVKY-------ALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G     S+T +    L     P +   + P + SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGEPELVARYLPMLASRDFDTLYQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           E+  G+D+  I ++  + +D     ++ L G KWF S+  +D  ++LA+ +G       +
Sbjct: 183 EQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNADADLAMVLARPDGAPDGIKGL 242

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+P+ L DG+ N     RLK+K+G+RS A+ E+        L+G++      + DM 
Sbjct: 243 ALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEGAHAHLIGEIGRGFHQMADMI 302

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L + + +   MR ++ EA+H A  R   G  LI+ P+M+R +  + L   AA  + 
Sbjct: 303 NMSRLSNGVRAAGLMRRAMNEALHVAMHREAFGRKLIEMPLMQRQLMKMLLPTEAARTMF 362

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            R+A    +A +   EAA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR
Sbjct: 363 IRIALLLQQADAGDAEAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             R++   SI  G+ N + LDV    ++   L + L + L   LG +
Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQRERAL-DALHAFLADRLGQA 468


>gi|167837216|ref|ZP_02464099.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 593

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 217/449 (48%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N +++D    AL+      A F  +   EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTNDPDCAALVRLHLGEARFRDL-EPELRTLGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP + AL R +  + GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEALETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  +   + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVGRFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQKIS--DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  + +  DG  I+ L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRDTSADGSAIWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A     +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADEGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|170733514|ref|YP_001765461.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169816756|gb|ACA91339.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 583

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 38/467 (8%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++ D  L AL+  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV-SGELDEWASRADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              GE   +++  PA+ AL R +  + GL   S    +  P+V+        A  +L  Q
Sbjct: 79  NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G     S+T +    L     P +   + P++ SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDFDTLYQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           E+  G+D+  I ++    +D     ++ L+G KWF S+  +D  ++LA+ +G       +
Sbjct: 183 EQAAGSDVGRIATRATCETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM 
Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+ 
Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR
Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             R++   SI  G+ N + LDV    ++  +  + L + L   LG++
Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468


>gi|221214813|ref|ZP_03587782.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221165352|gb|EED97829.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 583

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N +S D  L AL+      A++ + +  +L  LG  V S    E A  A+ + P L  
Sbjct: 20  GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
               GE   +++  PA+ AL R +  + GL          P +      ++ A  +L  Q
Sbjct: 78  RNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDAAPPL------VKYALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199
            E G     S+T +    L  T R   D      + P + SR++D   +  M        
Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
             +TE+  G+D+  I ++  + +D     ++ L G KWF S+  +D  ++LA+ +G    
Sbjct: 181 --MTEQAAGSDVGRIATRATRDTDAQGDTVWRLYGDKWFCSNADADLAMVLARPDGAPNG 238

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      +
Sbjct: 239 IHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLEGAHAYLIGEIGRGFHQM 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  +  L + + +   MR ++ EA+H A  R   G  LID P+M+R +  + L   AA
Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPTEAA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE 
Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           S AR  R++   SI  G+ N + LDV     +     EQ    L   LG 
Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463


>gi|152988795|ref|YP_001346933.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150963953|gb|ABR85978.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 575

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 214/461 (46%), Gaps = 29/461 (6%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   + E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPVFERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    V  HP + AL R +  +    ++  R   P        ++    +L  Q E 
Sbjct: 80  RRGEDRQSVRKHPDYIALERIAYAELGLAAMSHRPDGP-----PPLVKYTLTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   S  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTCSVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L EDGS N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 LREDGSRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L EA+  AR R   G  L++ P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALNEALFVARHRRAFGRYLVEMPLMQKQLLKLMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR  R++  
Sbjct: 365 PRADGGDGEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
            SI  G+ N + LD+   + +   L E L   L   L +SG
Sbjct: 425 GSIWEGTSNIVALDIARAVSREQAL-EPLRRHLRGLLDASG 464


>gi|221198466|ref|ZP_03571512.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221208585|ref|ZP_03581586.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221171576|gb|EEE04022.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221182398|gb|EEE14799.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 583

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N +S D  L AL+      A++ + +  +L  LG  V S    E A  A+ + P L  
Sbjct: 20  GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
               GE   +++  PA+ AL R +  + GL          P +      ++ A  +L  Q
Sbjct: 78  RNRRGEAVQRIDKDPAYVALERVAYSELGLSALSHQPDAAPPL------VKYALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199
            E G     S+T +    L  T R   D      + P + SR++D   +  M        
Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
             +TE+  G+D+  I ++  + +D     ++ L G KWF S+  +D  ++LA+ +G    
Sbjct: 181 --MTEQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNADADLAMVLARPDGAPDG 238

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      +
Sbjct: 239 IHGLALFLLPKTLADGTRNHYRIVRLKDKLGSRSMASGEIVLDGAHAYLIGEIGRGFHQM 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  +  L + + +   MR ++ EA+H A  R   G  LID P+M+R +  + L   AA
Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPAEAA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE 
Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           S AR  R++   SI  G+ N + LDV     +     EQ    L   LG 
Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463


>gi|218890181|ref|YP_002439045.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218770404|emb|CAW26169.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 575

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL + +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|254242291|ref|ZP_04935613.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192]
 gi|126195669|gb|EAZ59732.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192]
          Length = 575

 Score =  151 bits (381), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N Y+ D  L  L+  + P  +  E   L E + +    EL   A  A+ N P L    
Sbjct: 20  GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  HP + AL + +  +    S+  R   P        ++ A  +L  Q E 
Sbjct: 80  RRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T +    L     P + + + P + SR++D   +  M          +TE+ 
Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
            G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL+P+
Sbjct: 186 AGSDVARTRTVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  L +
Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  ++A   
Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  R++  
Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
            SI  G+ N + LDV   + +     EQ    L++ L
Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456


>gi|161524286|ref|YP_001579298.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189350958|ref|YP_001946586.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160341715|gb|ABX14801.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189334980|dbj|BAG44050.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 583

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N +S D  L AL+      A++ + +  +L  LG  V S    E A  A+ + P L  
Sbjct: 20  GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
               GE   +++  PA+ AL R +  + GL          P +      ++ A  +L  Q
Sbjct: 78  RNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDAAPPL------VKYALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199
            E G     S+T +    L  T R   D      + P + SR++D   +  M        
Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
             +TE+  G+D+  I ++  + +D     ++ L G KWF S+  +D  ++LA+ +G    
Sbjct: 181 --MTEQAAGSDVGRIATRAARDTDAHGNTVWRLYGDKWFCSNADADLAMVLARPDGAPDG 238

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      +
Sbjct: 239 IHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLDGAHAYLIGEIGRGFHQM 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  +  L + + +   MR ++ EA+H A  R   G  LID P+M+R +  + L   AA
Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPAEAA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE 
Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           S AR  R++   SI  G+ N + LDV     +     EQ    L   LG 
Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463


>gi|172061116|ref|YP_001808768.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171993633|gb|ACB64552.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 584

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 228/485 (47%), Gaps = 39/485 (8%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66
           MN   +  D+  A +  P   G+N +++D  L AL+     A   + +  +L  LG  V 
Sbjct: 1   MNDTARTPDA-GASDNIPDSRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S    E A  A+ + P L      GE   +++  PA+ AL  R  +  L  +      + 
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVAL-ERVAYSELGLAALSHQPDA 117

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
           V    A  ++ A  +L  Q E G     S+T +    L     P + + + P + SR++D
Sbjct: 118 V----APLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDFD 173

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG----QKISDGIYCLSGHKWFLSSPMS 240
              +  M          +TE+  G+D+  I ++         + ++ L G KWF S+  +
Sbjct: 174 TLFQGAMF---------MTEQAAGSDVGRIATRAVHETHASGEAVWRLYGDKWFCSNADA 224

Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+     
Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEGA 284

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G++      + DM  +  L + + +   MR +L E++H A RR   G  LI+ P+
Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAARRTAFGRTLIEMPL 344

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413
           M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  
Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTG 404

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           +AME  GG GYIEE S AR  R++   SI  G+ N + LDV    ++     EQ    L 
Sbjct: 405 DAMEVRGGIGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALR 459

Query: 474 QDLGS 478
             LG 
Sbjct: 460 TFLGD 464


>gi|304391704|ref|ZP_07373646.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303295933|gb|EFL90291.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 484

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 236/529 (44%), Gaps = 67/529 (12%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+S +++L       P  V ++L  L  Y  +  A+ELAR+     P+L          
Sbjct: 10  NAFSRNTVLNGAANGLPDPVLEDLAELAIYTEARQAKELARLTTLFQPRLDGDAAA---- 65

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              +FHPA+HAL RR +  GL  S+W  S E V     H  RA RL   A LE  HL   
Sbjct: 66  --FDFHPAFHALARRGVTAGLAGSVW--SNEEVEAGARHLTRALRLATAATLEPTHLTLL 121

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S T ASM ALM        WA  + SR+YD   +   +K  + + L +       D    
Sbjct: 122 SHTHASMAALMNDSESLGRWASGLMSRQYDTGARLSAEKQGLTVALAV-------DAVMT 174

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNG 269
             +G+    G + ++G    L +P +D  ++  Q           CF++ R     + +G
Sbjct: 175 AEKGE----GGWTITGRGLPLPAPAADLILVRGQTTANGPPQAETCFVIDRYA--AASSG 228

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L   RL     + S+     +F+N     +G        + ++  L+ LD A++    M+
Sbjct: 229 L---RL-----SISDGAAHCDFANVPAQPIGRPGDGADVMAELTTLLRLDRAVIEAGTMK 280

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +++ A   A                 RA+AD ALD+AAA AL+ RLA SFD A     E
Sbjct: 281 AAISRAAETAH-----------NDAQLRALADAALDVAAAHALALRLAASFDRAADDPVE 329

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A YAR+MAP+  +W  ++   V+A   EC    G   E +       SPA         A
Sbjct: 330 AGYARLMAPVAAFWSGRLLAPVLA---EC----GLTTEPA------RSPA---------A 367

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +  DV  +  +G    +++   + QDLG SG+    +LR S  +   D G  R   E++A
Sbjct: 368 LCDDVAQIARRGPRTVDRVVDRVAQDLGESGEGTANVLRSSREMAVADPGSIRMFMEQLA 427

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            A++AA L R     +A+ F E R      S++ ML  R +A  I+++L
Sbjct: 428 FAAAAAELQRIAPGILAEAFTETRLGRPWRSSYGMLDARHDAGDILEAL 476


>gi|309781942|ref|ZP_07676673.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308919286|gb|EFP64952.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 604

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 200/420 (47%), Gaps = 28/420 (6%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +L+ LG+ V S      A  A++N PQL      GE    +  HP + AL R +   
Sbjct: 67  LEPQLKSLGQRV-SDELDAWAISADHNPPQLRHRTRRGEALQTIVKHPDYVALERVA--- 122

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
             +  +   S   V       ++ A  YL  Q E G     S+T +    L     P + 
Sbjct: 123 --YAELGLASMSHVGNAPPPLVKYALTYLFVQAEFGLCCPVSMTDSLTRTLRKFGDPALL 180

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGI--YC 227
             + P + SR++D   +  M          +TE+  G+D+A I ++   +   DG   + 
Sbjct: 181 ARYLPMLASRDFDVLYQGAM---------FMTEQAAGSDVARIATRAALETAPDGTQTWR 231

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           L G KWF S+  +D  ++LA+ +G       +  FL+P+ L DGS N     RLK+K+G 
Sbjct: 232 LYGDKWFCSNADADLAMVLARPDGAPSGINGLALFLLPKTLRDGSRNHYRIVRLKDKLGT 291

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           RS A+ E+       +L+G++      + DM  +  L + + +   MR +  EA+H AR 
Sbjct: 292 RSMASGEIALEGATAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHIARN 351

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPIT 400
           R   G  LID P+M+R +  + L    A ++  ++A     A +   +AA   RI+ P+ 
Sbjct: 352 REAFGRKLIDMPLMQRQLLKMLLPTEQARSMFMQIAQLLPLADAGDAQAAKCVRILTPLI 411

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K+  C+ A  V  +AME  GG+GYIEE S AR  R++   SI  G+ N + LD+   +++
Sbjct: 412 KFRACRDARRVTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAVKR 471


>gi|171317918|ref|ZP_02907094.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171096925|gb|EDT41797.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 584

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 233/486 (47%), Gaps = 35/486 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66
           MN   +  D+  + N P    G+N +++D  L AL+     A   + +  +L  LG  V 
Sbjct: 1   MNDTTRTPDAGASGNIPD-SRGINFFTADPDLGALLKLHLGAAQYTRLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S    E A  A+ + P L      GE   +++  PA+ AL  R  +  L  +      E 
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVAL-ERVAYAELGLAALSHQPEA 117

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
           V    A  ++ A  +L  Q E G     S+T +    L     P + + + P + SR++D
Sbjct: 118 V----APLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDFD 173

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMS 240
              +  M          +TE+  G+D+  I ++  + +      ++ L G KWF S+  +
Sbjct: 174 TLFQGAM---------FMTEQAAGSDVGRIATRAVRETHAQGGAVWRLYGDKWFCSNADA 224

Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+     
Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGA 284

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G++      + DM  +  L + + +   MR +L E++H A  R   G  LI+ P+
Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMPL 344

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413
           M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  
Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTG 404

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++   L + L + L 
Sbjct: 405 DAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRTFLA 463

Query: 474 QDLGSS 479
             LG++
Sbjct: 464 DRLGAA 469


>gi|325525345|gb|EGD03187.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 446

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 216/441 (48%), Gaps = 35/441 (7%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88
           G+N +++D  L AL+  +     + ELE     + +  + EL   A  A+ + P L    
Sbjct: 20  GVNFFTADPDLGALLKLHLGDAQYAELEPQLRALGARVSDELDAWASRADKHPPVLEHRN 79

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS--FEPVVRKQAHKIRAARLYLMAQL 146
             GE   +++  PA+ AL R +  +    ++  RS    P+V+        A  +L  Q 
Sbjct: 80  RRGEAVQRIDKDPAYVALERVAYSELGLAALSHRSDAVPPLVKY-------ALTFLFVQA 132

Query: 147 EAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           E G     S+T +    L     P +   + PK+ SR++D   +  M          +TE
Sbjct: 133 EFGLCCPVSMTDSLTRTLRRFGDPDLVAHYLPKLASRDFDTLYQGAMF---------MTE 183

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
           +  G+D+  I ++  + +D     ++ L G KWF S+  +D  ++LA+ +G       + 
Sbjct: 184 QAAGSDVGRIATRAARDTDAQGNAVWRLYGDKWFCSNADADLAMVLARPDGAPEGIKGLA 243

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  
Sbjct: 244 LFLLPKTLPDGTRNRYRIIRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMIN 303

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+  
Sbjct: 304 MSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLIKMLLPAEAARAMFM 363

Query: 375 RLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR 
Sbjct: 364 QIALLLPQADAGDLQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARL 423

Query: 434 YRESPANSILLGSGNAMVLDV 454
            R++   SI  G+ N + LDV
Sbjct: 424 VRDAHLGSIWEGTSNIVALDV 444


>gi|291614632|ref|YP_003524789.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291584744|gb|ADE12402.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 570

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 194/414 (46%), Gaps = 44/414 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A EL+  A+   P L  +   G R D+V  HP +H L R +   G+    +D +F    R
Sbjct: 57  ATELSARADKQGPTLATHDARGMRRDRVVQHPDYHELERLAYGRGIVGIKYDAAFLAQHR 116

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H       Y  AQ E G               +  P    D   ++  R    T + 
Sbjct: 117 EVRHLAGFGAGYYFAQSEIG---------------LYCPICMTDGVGRVLERRPAGT-QT 160

Query: 190 PMQKTSVAI------------GLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKW 233
           P+ +T++A              + LTE++GG+D+ A     T QG++     + L+G KW
Sbjct: 161 PLYETTIAHLAASDLENLWQGAMFLTERQGGSDVGANTVTATRQGRR-----WLLNGDKW 215

Query: 234 FLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           F S+  +DA + LA++ G       +G FLV R    G+   +  QRLK+K+G RS AT 
Sbjct: 216 FCSNVAADAILALARMPGGAPGTKGLGLFLVLRQEPAGNSGTIRIQRLKDKLGVRSMATG 275

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           E+ F NT   L+   N     + +M  L  L +A+ SV+GMR +L EA+ Y   R+  G 
Sbjct: 276 EVTFENTVAHLVAGENEGFKQMAEMLNLSRLYNAVASVAGMRRALLEALKYGAGRNAFGH 335

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCK 406
            L + P+ + A+AD+  +      L F    + D + +  ++A    RI  P+ K    K
Sbjct: 336 RLDELPLWRAAMADLVAEHLGIFTLVFETVRALDRSDNGDDQARKLLRIAIPMAKALSGK 395

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A   ++EAME IGG+ YIEE  + R  R+     I  G+ + + LD L  ++K
Sbjct: 396 LAVFAVSEAMEAIGGNAYIEESILPRLLRDCQVLPIWEGTTHILTLDALRAIQK 449


>gi|323166668|gb|EFZ52426.1| aidB domain protein [Shigella sonnei 53G]
          Length = 256

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 131/245 (53%), Gaps = 8/245 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFL 257
           + CFL
Sbjct: 235 LSCFL 239


>gi|271967416|ref|YP_003341612.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270510591|gb|ACZ88869.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 584

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 212/463 (45%), Gaps = 58/463 (12%)

Query: 33  GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N Y SD  L  L+     A         LE  G  ++     E A   + N P+L  Y
Sbjct: 33  GLNWYGSDPTLRFLMHRHLGAGALEWAAPHLERAGA-LMGGPILEHAEETDRNPPRLERY 91

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR-----SFEPVVRKQAHKIRAARLYL 142
              G    ++   P++ A  R  +        + R       +PV    A        YL
Sbjct: 92  DRWGHDVSRIVMPPSFEAARRELVAGSFTRPEFAREAKAAGADPVTMGLAWN------YL 145

Query: 143 MAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           + Q + G +     T   MV LM     P+  K+   +IF+        A M        
Sbjct: 146 LYQADIG-MGCALGTGGDMVVLMAEAFAPQDVKERVREIFADGMFSGEAAQM-------- 196

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
              TE+ GG+D+AA+ S      D  + L+G KWF S+    AF++LA+ EG       V
Sbjct: 197 --FTERTGGSDLAALESTATPAGDA-WRLNGLKWFASNANGSAFVVLAKAEGGPDGSRGV 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLV R   DG  NG+  +RLK+K+G RS A+ E+EF++   FLL   +  TG  + + 
Sbjct: 254 APFLVLRERRDGGHNGIRVRRLKDKLGTRSVASAEIEFTDAEAFLLAPESTGTGDGKGLG 313

Query: 314 ILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++ L +      A M +S  R +L E++ YAR R   G  LIDQP+M+R +A++ +++ 
Sbjct: 314 RMMELTNGARLGIATMGLSCARRALVESLCYARSREAFGAALIDQPLMRRKLAELIVEVE 373

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA AL       FD   +R       R+   + K    ++     ++A+E  GG+GYIE+
Sbjct: 374 AAQAL------VFDGFHTR------LRLGPALIKLRAARLGVTAASDAIEVHGGNGYIEQ 421

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQL 468
             +AR  R++  N I  G  N + LDV   ++K  +L  F++L
Sbjct: 422 WPVARILRDAQVNPIWEGGDNILCLDVRRAVKKDQHLPFFDRL 464


>gi|206560596|ref|YP_002231361.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198036638|emb|CAR52536.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 583

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 225/467 (48%), Gaps = 38/467 (8%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N ++ D    AL+  +     + ELE     LG  V S    E A  A+ + P L   
Sbjct: 20  GINFFTVDPDFGALLKLHLGDARYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              GE   +++  PA+ AL R +  + GL   S    +  P+V+        A  +L  Q
Sbjct: 79  NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G     S+T +    L     P +   + P + SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDFDTLYQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           E+  G+D+  I ++    +D     ++ L+G KWF S+  +D  ++LA+ +G       +
Sbjct: 183 EQAAGSDVGRIATRATCETDVHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+P+ L DG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM 
Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L + + +   MR +L EA+H A  R   G  LI+ P+M+R +  + L   AA A+ 
Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR
Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             R++   SI  G+ N + LDV    ++  +  + L + L   LG++
Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468


>gi|188591922|ref|YP_001796520.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170938296|emb|CAP63281.1| Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 600

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 192/413 (46%), Gaps = 41/413 (9%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRS 123
           ELA +A+ N P+L      G    +++ HPA+  + R +  + GL  +        WD+ 
Sbjct: 73  ELAGVADRNPPELSYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRSGVLGWDQP 132

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181
             P  +        A  YL  Q E G     S+T +    L     P +   + P + ++
Sbjct: 133 MPPAAKY-------ALTYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRFLPNLTTQ 185

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239
            +D   +  M          +TE+  G+D+AA  ++  +   ++G + L G KWF S+P 
Sbjct: 186 VFDDLYQGAMF---------MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPD 236

Query: 240 SDAFIMLAQVEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +   ++LA+VE   G           FL+PR L DGS N     RLK+K+G RS A+ E+
Sbjct: 237 AALAMVLARVEDEAGNAVPGHKGVSLFLLPRKLADGSANHYRIIRLKDKLGTRSMASGEI 296

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                  +L+G+       + DM     L + + +   MR +L E +  AR R   G  L
Sbjct: 297 RLEGAHAWLVGEPGRGFVQMADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRL 356

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKM 407
            D P+M+R +  + L    A  + F+ A +   A +  E  AYA  RI+ P+ K+  C+ 
Sbjct: 357 QDMPLMRRQLLKLTLPTEQARTMVFQTAEALRRADA-GEADAYALMRILTPLIKFRACRD 415

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  V  +AME  GG GYIEE S  R  R++   SI  G+ N + LDVL  + +
Sbjct: 416 ARKVTGDAMEIRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAVRR 468


>gi|213513810|ref|NP_001133849.1| AIDB protein [Salmo salar]
 gi|209155562|gb|ACI34013.1| aidB [Salmo salar]
          Length = 628

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 209/471 (44%), Gaps = 54/471 (11%)

Query: 35  NAYSSDSLLVA-LIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           N +  D+LL   L  + PS  V+ +L + GE ++        R      P+L  Y P G 
Sbjct: 69  NPFLEDALLQGYLRRHLPSEAVYSDLHVFGERLVR-EVDGWGRECEVTPPRLVTYDPWGC 127

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D++   PAW  +   S  +GL    ++RS+             +R+Y M +L   +L 
Sbjct: 128 RVDRIVTSPAWQRMKDLSAQEGLVAIGYERSYG----------EWSRVYQMCKL---YLY 174

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKI-------------FSREYDPTNKAPMQKTSVAIG 199
           SPS        L T P    D A K+             FSR    T++ P    +   G
Sbjct: 175 SPSS------GLYTCPLAMTDGAAKVIQSLGVSWPVADAFSRL---TSRNPEHFWTS--G 223

Query: 200 LGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGR--- 252
             +TE+RGG+D+   T       SDG Y LSG KWF S+  +D  + LA+V   +G+   
Sbjct: 224 QWMTERRGGSDVGNGTETIALPQSDGTYRLSGFKWFTSATDADMTLTLARVTDVDGQTTS 283

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  F      E G   G+  QRLK+K+G R   T EL         L +       
Sbjct: 284 GSRGLSMFYAAVRDEQGMVQGIEVQRLKDKLGTRQMPTAELLLDGLPAHRLSEEGRGVAC 343

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +  + +++ +V+GMR  L  A  YA RR   G +L D P+  + +A + ++   
Sbjct: 344 IANMLTVSRIHNSVSAVAGMRRVLQLARDYATRRSAFGKLLRDHPLHMQTLARMEVETRG 403

Query: 369 ATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           A  L     RL    +   +   E    R++ P+ K +  K A AVI+E +E  GG GYI
Sbjct: 404 AFLLVMEVCRLIGREETGHASQLETHLLRLLTPVAKLYTGKQAIAVISEGLESFGGQGYI 463

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           E+  +    R++   SI  G+ N + LDVL  + + + L  Q + T  Q L
Sbjct: 464 EDTGLPAMLRDAQVLSIWEGTTNVLSLDVLRCVSRSSGLVLQAYFTHTQSL 514


>gi|167619358|ref|ZP_02387989.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 593

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F   +  EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP + AL R +  + GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++   ++  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  + +     G + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRETSADGAGTWRLFGDKWFCSNADADLAMVLARPEGAPDGVNG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|167825010|ref|ZP_02456481.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|226195529|ref|ZP_03791117.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225932489|gb|EEH28488.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 597

 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|126455351|ref|YP_001066955.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242315972|ref|ZP_04814988.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|126228993|gb|ABN92533.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|242139211|gb|EES25613.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 595

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|254191357|ref|ZP_04897861.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157939029|gb|EDO94699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 595

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 23  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 80

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 81  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 133

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 184

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 185 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 244

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 304

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 364

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 365 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453


>gi|76809492|ref|YP_334166.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|167911738|ref|ZP_02498829.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|254259404|ref|ZP_04950458.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|254296987|ref|ZP_04964440.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|76578945|gb|ABA48420.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
 gi|157807916|gb|EDO85086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|254218093|gb|EET07477.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 597

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|254209407|ref|ZP_04915753.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|147750180|gb|EDK57251.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
          Length = 595

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 23  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 80

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 81  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 133

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 184

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 185 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 244

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 304

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 364

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 365 FMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453


>gi|53724187|ref|YP_103373.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67639362|ref|ZP_00438227.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|124384158|ref|YP_001028996.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126450449|ref|YP_001081083.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|254178355|ref|ZP_04885010.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254200330|ref|ZP_04906696.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254357923|ref|ZP_04974196.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52427610|gb|AAU48203.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|124292178|gb|ABN01447.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126243319|gb|ABO06412.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147749926|gb|EDK57000.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|148027050|gb|EDK85071.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160699394|gb|EDP89364.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238519897|gb|EEP83363.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
          Length = 597

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|167919739|ref|ZP_02506830.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
          Length = 597

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|134278016|ref|ZP_01764731.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167816609|ref|ZP_02448289.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|134251666|gb|EBA51745.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 597

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|213586298|ref|ZP_03368124.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 176

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 1/175 (0%)

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ 
Sbjct: 2   LVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASA 61

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + AI++A +R   G 
Sbjct: 62  EVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGK 121

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            LI+QP+M++ ++ +AL +   TAL FRLA ++ E +  ++EA +AR+  P  K+
Sbjct: 122 PLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKF 175


>gi|167739400|ref|ZP_02412174.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 470

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|237813068|ref|YP_002897519.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|237505300|gb|ACQ97618.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
          Length = 595

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|53719939|ref|YP_108925.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|52210353|emb|CAH36332.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
          Length = 597

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|254184327|ref|ZP_04890917.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184214858|gb|EDU11901.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 597

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|254503978|ref|ZP_05116129.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222440049|gb|EEE46728.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 601

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 223/502 (44%), Gaps = 46/502 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---- 128
           L+R A+ + P LH   P G   D +EFHPA+  + + +  D    ++   + +P V    
Sbjct: 75  LSRTADRHVPVLHHRDPRGRFEDWIEFHPAYKRMEQITFCD---FAMAGMTGKPGVFGWP 131

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TN 187
               H ++    YL+ Q E G L   S+T        T   + K     +  R YD   +
Sbjct: 132 EPMPHTVKFLFQYLLGQSEFGQLCPISMTET------TAAMIKKFGGEALIERFYDRLIS 185

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           + P  +T ++ G  +TE+ GG+D++ +  +  +  DG + L G KWF S+  +D  ++LA
Sbjct: 186 QDP--ETRMSGGQFMTERHGGSDVSQLAVEA-RFDDGEWRLYGEKWFCSAADADVVLVLA 242

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +  G       +  F +PR LEDGS N     RLK+K+G  S A+ E+ F     + LGD
Sbjct: 243 RPRGAPAGNKGLAVFALPRRLEDGSRNAYRVVRLKDKLGTLSMASGEVVFEGAVAYPLGD 302

Query: 302 LNVSTGPVEDMKI----LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     P   M +    L  L     + S MR  L EA+  AR R   G  +I +P+++R
Sbjct: 303 VGAKENPGLKMMMNQVSLSRLSHGARAASMMRRCLNEAMTVARSRKAFGETIIGKPLLRR 362

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAM 416
            +  + +    A +++  L      A +    A   ARI+ P  KY   +    V   AM
Sbjct: 363 QLMKLLVPTEQALSMTLYLGTVLTAAANGDTHAERVARILTPAHKYRTARDNIRVATGAM 422

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           E  GG+GYIE+   AR  R++    +  G+ N   LD+       T   + L S L + +
Sbjct: 423 EVRGGNGYIEDFVNARLVRDAHVGLLWEGTSNINALDITTRAIGRTEAHKDLKSALLEQI 482

Query: 477 -------GSSGKKVITILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMND 524
                  GS    + + L  S+ L +E     ++ LAR     +  AS+A  L   G   
Sbjct: 483 EDCPGLPGSFASALKSSLIKSLDLAEEIARRGEESLARQAASAVYHASTAVLLACEGARL 542

Query: 525 IAD------VFLENRFLDNCHS 540
            AD      + L    +D+C S
Sbjct: 543 GADGGDARRLLLARMVIDHCLS 564


>gi|167846523|ref|ZP_02472031.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
          Length = 597

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|254195904|ref|ZP_04902330.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|169652649|gb|EDS85342.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
          Length = 597

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|167903488|ref|ZP_02490693.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
          Length = 601

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|217420505|ref|ZP_03452010.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|217395917|gb|EEC35934.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 597

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|126441421|ref|YP_001059673.1| Acyl-CoA dehydrogenases [Burkholderia pseudomallei 668]
 gi|126220914|gb|ABN84420.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 599

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLRP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|326930039|ref|XP_003211160.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Meleagris
           gallopavo]
          Length = 638

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 234/523 (44%), Gaps = 43/523 (8%)

Query: 4   REIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFP----SVVHKEL 58
           +++   L M    + +++LF     P     N Y  D+LL + L A+ P      V +EL
Sbjct: 45  KQVGADLEMPVARREAETLFQERPEP----GNQYLEDALLRSYLEAHLPPKVLEEVSQEL 100

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           E  G  +L+   + L      N P    Y   G+R D +    AW  +   +  +GL   
Sbjct: 101 EGFGNRLLT-KIRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLVAE 159

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAP 176
            ++R +    R   H+  A +LYL +    G     ++T  +A ++  +  P   K+   
Sbjct: 160 AYERRYSNWSR--VHQ--AVKLYLFSTASGGFNCPLAMTDGAAKVIESLGVPASLKNAFD 215

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFL 235
            + SR  DP       +     G  +TE+RGG+D+A  T    +K  DG Y L G KWF 
Sbjct: 216 HLTSR--DP-------RKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYHLYGFKWFT 266

Query: 236 SSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           S+  SD  + LA++E          G +  F +    E+   NG+  QRLK K+G R  A
Sbjct: 267 SAADSDMALTLARIEDAEGHVKQGSGGLSLFFLRVRDEEEKLNGIQVQRLKAKLGTRQMA 326

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T EL  +     L+         + +M  +  + + I +V+ MR  ++ +  YA +R   
Sbjct: 327 TAELWLNGAKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSRQYALKRVAF 386

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKY 402
           G +L D P+  + IA + +    A  L   +A     A++     ++    R++ P+ K 
Sbjct: 387 GKLLKDHPLHMQTIARMEVQTRGAFLLLMEMARLLGLAETNMASEQDQLLLRLLVPVAKL 446

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +  K A A+  EAME  GG GY+E+  +    R++   SI  G+ N + LDVL  L K  
Sbjct: 447 YTGKQASAIAIEAMESFGGQGYMEDTGLPVIVRDTLVLSIWEGTTNVLSLDVLRSLAKSQ 506

Query: 463 -NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG-LARF 503
             +    FST++  LG +       L+ ++   ++  G LARF
Sbjct: 507 GQVMAVFFSTVQNKLGLASSSA--ELQPAVQFVQDAAGRLARF 547


>gi|239817931|ref|YP_002946841.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804508|gb|ACS21575.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 574

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 190/406 (46%), Gaps = 35/406 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GL-------HCSIWDRSFEPVV 128
           A+ N P L      G    KV  HPA+  + R ++ + GL           W     P+V
Sbjct: 71  ADRNPPTLKQRTRTGLDEQKVVKHPAYVEMERLALSEFGLAAMSHRDQTLGWKGRMPPLV 130

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186
           +           YL  Q E G     S+T +    L     P +   + P++ S ++D  
Sbjct: 131 KY-------VLTYLFVQAEFGLCCPVSMTDSLTRTLKKFGGPELVARFLPRLTSLDFDEL 183

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            +  M          +TE+  G+DIAA  +  ++ +DG + LSG KWF S+P +D  ++L
Sbjct: 184 AQGAM---------FMTEQAAGSDIAATATMARQEADGSWRLSGDKWFCSNPDADFAMVL 234

Query: 247 AQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           A+ +        V  FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G
Sbjct: 235 ARADNGPAGMKGVSLFLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLEGAVAYLVG 294

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + DM     L + + +   MR ++AEA + A  R   G  L   P+M+R + 
Sbjct: 295 EEGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQRQLD 354

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMEC 418
            + L    A  +  + A +   + +  E  AYA  RI+ P+ K+  C+ A  V  +AME 
Sbjct: 355 KLRLPAEQARTMVCQTALALARSDA-GEPDAYALLRILTPLIKFRACRDARKVTGDAMEV 413

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L
Sbjct: 414 RGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAVKREGSL 459


>gi|215425048|ref|ZP_03422967.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T92]
          Length = 370

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 141/255 (55%), Gaps = 19/255 (7%)

Query: 233 WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           WF S+   +AF++LA+ EG       V  FLV R   DGS NG+  +RLK+K+G RS A+
Sbjct: 1   WFASNCAGEAFVVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVAS 60

Query: 287 VELEFSNTFGFLL-GDLNVSTGPVE--------DMKILIYLDSAIMSVSGMRVSLAEAIH 337
            E+EF +   FLL G+ +   GP +        ++   + L +A  ++   R +L E++ 
Sbjct: 61  GEIEFVDAEAFLLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLC 120

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   GG LID+P+M+R +A++ +D+ AA A+ F   + F  A  R       RI  
Sbjct: 121 YAGQRRAFGGALIDKPLMRRKLAEMVVDVEAALAMVF---DGFGAANHRQPRCLPQRIAV 177

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+TK   C++   V ++A+E  GG+GYIE   +AR  R++  N+I  G  N + LDV   
Sbjct: 178 PVTKLKTCRLGITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRG 237

Query: 458 LEKGTNLFEQLFSTL 472
           +E+ T   E L + L
Sbjct: 238 IEQ-TRAHETLLARL 251


>gi|313117232|ref|YP_004044215.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312294123|gb|ADQ68554.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 586

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 213/455 (46%), Gaps = 31/455 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRS 123
           ++  T  + A +A+ N P+L  +   GE  +++E HPA H    R +++ G+   +++  
Sbjct: 51  MIGHTVADNADVADDNPPKLRTHNKHGEVINEIEHHPA-HIENERLVYEAGVIADVFE-- 107

Query: 124 FEPVVRKQ--AHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIF 179
             P  R+   +      + YLM    +  L  P   +  A++V         + +   + 
Sbjct: 108 -SPPGREDPVSFPYHFGQFYLMEYASSVGLSCPGAMTGGAALVLDKFDDGSLQRFYDGLT 166

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           +R+YD      M          LTEK+GGTD+ A     +   DG Y L G KWF S+  
Sbjct: 167 ARDYDDLMTGAMF---------LTEKQGGTDVGANEVTAEPQEDGTYELYGEKWFCSNID 217

Query: 240 SDAFIMLAQ-------VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           S+A ++LA+        EG +  FLV     DG P    ++RLK+K+G  +  T E+ F 
Sbjct: 218 SEAALVLARRPAAPDGTEG-LSLFLVSTHDRDGEPTNYRFRRLKDKLGTVTVPTGEVVFE 276

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               +L+G+       + +M     L +AI S   M  SL E+  +A  R V G  L + 
Sbjct: 277 GAEAYLIGESENGFRQMSEMLNAERLYNAIGSCGSMGRSLLESKVHAANREVFGKRLDEH 336

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYWCCKMAPA 410
           P+M+R +A++A D  AA A +F    +    +  +++ A+   RI+ P  KY   +MA  
Sbjct: 337 PLMRRDLAEMATDHEAALAFTFEAVEALHRRERENDDEAHRLMRILVPTAKYRTARMAVD 396

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
             + AME  GG+GY+EE    R  R +    I  G+ N M LDVL  +++     E L +
Sbjct: 397 TASYAMEIKGGNGYVEEFVHPRLLRNAQVLPIWEGASNVMALDVLRSMDREA-AHEPLLT 455

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
            +++ L S    V+  L  +  +  E  GLA  +T
Sbjct: 456 LIDERLDSVTHPVLERL--AAEIRDERDGLANAIT 488


>gi|167581276|ref|ZP_02374150.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 593

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 216/447 (48%), Gaps = 35/447 (7%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F   +  EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
               GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L  Q 
Sbjct: 83  RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRGDAP-----PPLVKYALTFLFVQA 137

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           E G     S+T +    L    +  + + + P++ SR++   ++  M          +TE
Sbjct: 138 EFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------MTE 188

Query: 205 KRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
           +  G+D+  I ++   +  +DG   + L G KWF S+  +D  ++LA+ EG       + 
Sbjct: 189 QAAGSDVGRIATRAVRETSADGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVNGLA 248

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM  
Sbjct: 249 LFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADMIN 308

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +L  
Sbjct: 309 MSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFM 368

Query: 375 RLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR 
Sbjct: 369 QIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDARV 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
            R++   SI  G+ N + LDV   +++
Sbjct: 429 LRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|169858313|ref|XP_001835802.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
 gi|116503140|gb|EAU86035.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
          Length = 597

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 196/429 (45%), Gaps = 42/429 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V  +LE LG+ VL+   + LA  A  + P L  Y   G R D +E    W  L   +  +
Sbjct: 40  VQPDLERLGKEVLTVI-RPLADSAAVSNPTLTQYDQWGRRIDNLETSEGWRKLKAIAQQE 98

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVH 171
           GL    ++R++    R        A++ LM     E    +S +  +A ++ L+  P + 
Sbjct: 99  GLPGIFYERTYGEHSRIYGF----AKMLLMVGDTQEVFCPLSMTDGTARVIELIGNPALK 154

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-----IY 226
           +D  P++ SR  DP+        +   G  +TE+ GG+D++   +    +S        Y
Sbjct: 155 RDVLPRLISR--DPSQ-------AFTAGQWMTERPGGSDVSLTETTATDLSQTHSYGPKY 205

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLL------EDGSP----NGL 270
            L+G KWF S+  S+  + LA+      G  G   FL+P  L       D  P    N +
Sbjct: 206 SLNGIKWFSSATDSEVSVALARTGSISAGSRGLSLFLIPLRLPLFPAPSDSKPSSTSNNI 265

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              RLKNKIG     T EL   NT G+L+  LN     +  +  +  L SAI SV  +R 
Sbjct: 266 FIHRLKNKIGTHVLPTAELSLQNTEGYLISPLNQGVKHITPVLNITRLWSAITSVGHLRK 325

Query: 331 SLAEAIHYARRRHVSGG--ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK---S 385
            L+ A  YAR R +  G  +L D P+    +A I L   A T + F +A    + +   +
Sbjct: 326 CLSIATSYARVRAIKSGTQLLQDNPLHVAQLAQINLLYRALTHMCFSVAGLMGKVECGVA 385

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             EEA   R++ P+ K +C + A   + EAM  +GG+GY+EE  I R  R+     I  G
Sbjct: 386 SGEEAKRLRMLTPVVKAFCAEKASVGMEEAMSALGGAGYMEENGIGRAIRDGLVEKIWEG 445

Query: 446 SGNAMVLDV 454
           +   + LD+
Sbjct: 446 TVVVLALDL 454


>gi|83719195|ref|YP_442364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|257138566|ref|ZP_05586828.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83653020|gb|ABC37083.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 593

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F   +  EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP + AL R +  + GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++   ++  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  + +       + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVNG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|116694047|ref|YP_728258.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528546|emb|CAJ94893.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 598

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 191/413 (46%), Gaps = 41/413 (9%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRS 123
           ELA +A+ + P+L      G    +++ HPA+  + R +  + GL  +        WD+ 
Sbjct: 72  ELAGVADRHPPELTYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRGGVLGWDKP 131

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181
             P  +        A  YL  Q E G     S+T +    L     P +   + P + ++
Sbjct: 132 MPPAAKY-------ALTYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRYLPNLTTQ 184

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239
            +D   +  M          +TE+  G+D+AA  ++  +   ++G + L G KWF S+P 
Sbjct: 185 VFDDLYQGAMF---------MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPD 235

Query: 240 SDAFIMLAQVEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +   ++LA+VE   G           FL+PR L DGS N     RLK+K+G RS A+ E+
Sbjct: 236 AALAMVLARVEDEAGNAVPGHKGVSLFLLPRKLADGSDNHYRIIRLKDKLGTRSMASGEI 295

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                  +L+G+       + DM     L + + +   MR +L E +  AR R   G  L
Sbjct: 296 RLEGAHAWLVGEPGRGFVQMADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRL 355

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKM 407
            D P+M+R +  + L    A  + F+ A +   A +  E  AY   RI+ P+ K+  C+ 
Sbjct: 356 QDMPLMRRQLLKLTLPTEQARTMVFQTAEALRRADA-GEADAYPLMRILTPLIKFRACRD 414

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  V  +AME  GG GYIEE S  R  R++   SI  G+ N + LDVL  + +
Sbjct: 415 ARKVTGDAMEIRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAVRR 467


>gi|86563381|ref|NP_001033378.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis
           elegans]
 gi|3881018|emb|CAA21490.1| C. elegans protein Y45F3A.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 617

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 22/440 (5%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V  +L   G+ + S   + L R A    P+L      G+R DK+     WH L +    +
Sbjct: 68  VAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEE 126

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+    ++ S +P VR+  H++  A+L+L +   AG +  P   +   V  +T+  ++  
Sbjct: 127 GVISIGYEDSVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYG- 181

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK 232
              K+ +   D        K   + G  +TEK+GG+D+A    +   +I    Y L G+K
Sbjct: 182 -KHKLATEAVDRLRSRDPSKAWTS-GQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYK 239

Query: 233 WFLSSPMSDAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           WF S+  +D  + LA++        EG  G   FL+    E G+ NG+   RLKNK+G +
Sbjct: 240 WFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRLKNKLGTK 299

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
              T EL         +GD       + +M  +  + +A+ S+  MR  ++ A  Y+ +R
Sbjct: 300 QLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKR 359

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPI 399
            V G      P+    +A + +D   +  L F   RL    +  KS   EA   R++ P+
Sbjct: 360 VVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPV 419

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  K A  +++E +EC GG GY+E+  +    R++    I  G+ N + LDVL +  
Sbjct: 420 LKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFS 479

Query: 460 KGTNLFEQLFSTLEQDLGSS 479
              N+       +EQ LG++
Sbjct: 480 GKENILLAFGKRVEQLLGNT 499


>gi|86563383|ref|NP_001033379.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis
           elegans]
 gi|74832016|emb|CAJ30236.1| C. elegans protein Y45F3A.3b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 608

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 22/440 (5%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V  +L   G+ + S   + L R A    P+L      G+R DK+     WH L +    +
Sbjct: 59  VAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEE 117

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+    ++ S +P VR+  H++  A+L+L +   AG +  P   +   V  +T+  ++  
Sbjct: 118 GVISIGYEDSVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYG- 172

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK 232
              K+ +   D        K   + G  +TEK+GG+D+A    +   +I    Y L G+K
Sbjct: 173 -KHKLATEAVDRLRSRDPSKAWTS-GQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYK 230

Query: 233 WFLSSPMSDAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           WF S+  +D  + LA++        EG  G   FL+    E G+ NG+   RLKNK+G +
Sbjct: 231 WFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRLKNKLGTK 290

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
              T EL         +GD       + +M  +  + +A+ S+  MR  ++ A  Y+ +R
Sbjct: 291 QLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKR 350

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPI 399
            V G      P+    +A + +D   +  L F   RL    +  KS   EA   R++ P+
Sbjct: 351 VVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPV 410

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  K A  +++E +EC GG GY+E+  +    R++    I  G+ N + LDVL +  
Sbjct: 411 LKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFS 470

Query: 460 KGTNLFEQLFSTLEQDLGSS 479
              N+       +EQ LG++
Sbjct: 471 GKENILLAFGKRVEQLLGNT 490


>gi|302689643|ref|XP_003034501.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8]
 gi|300108196|gb|EFI99598.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8]
          Length = 591

 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 213/462 (46%), Gaps = 52/462 (11%)

Query: 27  QPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELE----LLGEYVLSCTAQELARMANYNT 81
           Q P +   N+Y++D +L +L+    P  + +ELE     LG+ + +   +++ R    + 
Sbjct: 8   QIPPYEEGNSYTTDPVLQSLLKRILPDEIFRELEPDLVRLGDDI-NTVIRDIHRRGEVSD 66

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  Y   G R D+++    W  L   +  +GL    ++R      R        AR+ 
Sbjct: 67  PTLVQYDQWGRRVDRLQTSEGWRKLKAIAQKEGLPALFYERKHGEFSRVDGF----ARVL 122

Query: 142 LMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +M           S+T   A ++ LM TP + KD  P++ SR  +P +       +   G
Sbjct: 123 MMTGDMHTIFCPISMTDGCARVIELMGTPAMKKDIFPRLISR--NPEH-------AFTAG 173

Query: 200 LGLTEKRGGTDIAAI----TSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
             +TE+ GG+D++      TS G+    G  Y L G KWF S+  SD  + L    GR G
Sbjct: 174 QWMTERPGGSDVSQTETVATSTGRAHEYGPAYTLDGFKWFSSATDSDVALAL----GRSG 229

Query: 255 ----------CFLVP---RLLEDG--SP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                      FLVP    LL D   SP  N +   RLKNK G ++  T EL    T G+
Sbjct: 230 PASSGSRGLSLFLVPLRKPLLGDPAVSPISNNIFVHRLKNKFGTKALPTAELSLEGTEGY 289

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILIDQPVM 355
            +G  N     +  +  +  + SA+ SVS +R SL  A  YA+ R + GG  +L D P+ 
Sbjct: 290 RVGPENQGVKLITPVLNITRVWSAVHSVSALRRSLFIATSYAKVRKIRGGAQLLQDTPLH 349

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVI 412
              +A + L   A T  SF + +   +++   + +EE    RIM P  K +  + A   I
Sbjct: 350 VAQLASLHLTYRALTHFSFGVVHLLGKSEYGTASTEERHLLRIMTPTVKAFATEKAVPAI 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           A+AM  +GG+GY+EE  I R  R++    I  G+   + LD+
Sbjct: 410 ADAMSALGGNGYMEENDIPRLLRDAMVERIWEGTTTVLSLDL 451


>gi|94314812|ref|YP_588021.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93358664|gb|ABF12752.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 598

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 208/460 (45%), Gaps = 45/460 (9%)

Query: 33  GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G + +++D  L AL+     A+  + +   LE +G         ELA  A++  P L   
Sbjct: 28  GASLFTADPDLRALLPLYLPADLFNHLLPHLERMGALA-GGVLDELANEADHAPPTLSHR 86

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139
              G    ++  HP++  L R +  + GL  +        WD+   P  +        A 
Sbjct: 87  IRTGLDAQRIHKHPSYVELERVAFSEFGLAAASHRGGVLGWDKPMPPAAKY-------AL 139

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            YL  Q E G     S+T +    L     P +   + P + ++ +D   +  M      
Sbjct: 140 TYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVDRFLPNLTTQVFDDLYQGAMF----- 194

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVE----- 250
               +TE+  G+D+AA T++  +   ++G + L G KWF S+P +   ++LA+VE     
Sbjct: 195 ----MTEQGAGSDVAATTTRAIRDGNAEGGWRLVGDKWFCSNPDAALAMVLARVEEADGS 250

Query: 251 -----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  V  FL+PR L DGS N     RLK+K+G RS A+ E+       +++G+L   
Sbjct: 251 AVAGIKGVSLFLLPRTLADGSANHFRIIRLKDKLGTRSMASGEIRLEGAHAYMVGELGRG 310

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + DM     L + + +   MR +L E    AR R   G  L D P+M+R +  + L 
Sbjct: 311 FVQMADMINNSRLSNGVRAAGLMRRALTEGQFIARERRAFGKRLADMPLMRRQLLKLTLP 370

Query: 366 IAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              A  + F+ A +   A +   +A    RI+ P+ K+  C+ A  V  +AME  GG GY
Sbjct: 371 TEQARTMVFQTAEALRRADAGDADAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCGY 430

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           IEE S  R  R++   SI  G+ N + LDVL  + +  +L
Sbjct: 431 IEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 470


>gi|163793385|ref|ZP_02187360.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181187|gb|EDP65702.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 574

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 201/441 (45%), Gaps = 23/441 (5%)

Query: 33  GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+NAY  D  L  L+     A+  + +    E LG+ ++     +LA  A+ N P LH  
Sbjct: 26  GINAYRDDEALQQLLALYLPASDLATLRPTFESLGD-LIGGRLDQLAHSADRNPPTLHPR 84

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G     +E HPA+  + R    +    ++  R    +     H  + A  YL AQ E
Sbjct: 85  DRQGRDRQWIEKHPAYTEMERIGYGEFAMAAMSHRPALGLNHPVPHAAKYAIQYLFAQAE 144

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G L   S+T A    L  T R   D  P +  R Y P   A   +  +   + +TE+  
Sbjct: 145 FGLLCPISMTDA----LTRTIRHFAD--PALVER-YLPGLTADDLEHQIQGAMFMTERAA 197

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
           G+D+ A  ++   + +G  + L G KWF S+  +   ++LA+ EG       V  FL+PR
Sbjct: 198 GSDVGATITRA--VPNGNAWRLHGDKWFCSNTDAGLALVLARPEGAPSGIKGVSLFLLPR 255

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            L +G  N     RLK+K+G RS  + E+       +++G+       + +M     L +
Sbjct: 256 DLPEGGRNAYRIVRLKDKLGTRSMPSGEITLEGALAWMVGEPGQGFVQMAEMINQSRLSN 315

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR +  EA+  AR R   G  LID P+ +R +  I L    A ++    A++ 
Sbjct: 316 AVRSAGMMRRAWREAVTVARGRSAFGRRLIDMPLQQRQLLKILLPGEQALSMVLYTADAL 375

Query: 381 DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             A S   E  A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE    R  R+S  
Sbjct: 376 SRADSGDAEGKALRRILTPLVKFRVCRDARKVTGDAMEARGGVGYIEEWIEPRLLRDSHL 435

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            SI  G+ N + LDVL    K
Sbjct: 436 GSIWEGTSNIVALDVLRAARK 456


>gi|120610521|ref|YP_970199.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120588985|gb|ABM32425.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 571

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 168/334 (50%), Gaps = 20/334 (5%)

Query: 141 YLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL  Q E G     S+T +    L    +P +   + P + S ++D   +  M       
Sbjct: 131 YLFVQAEFGLCCPVSMTDSLTRTLRRFGSPELLARYLPALTSLDFDELAQGAMF------ 184

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
              +TE+  G+DIAA  ++    +DG + L+G KWF S+P +   ++LA+++G       
Sbjct: 185 ---MTEQGAGSDIAATATRATPAADGSWRLTGDKWFCSNPDAGFAMVLARIDGAPEGLKG 241

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           V  FL+PR LEDGS N     RLK+K+G RS A+ E+  +     L+G+       + DM
Sbjct: 242 VSLFLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLAGAVAHLVGEEGRGFVQMADM 301

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L + + +   MR +++EA   A  R   G  L D P+M+R +  + +    A  +
Sbjct: 302 VNNSRLSNGVRAAGLMRRAVSEAEFVASERRAFGRALQDMPLMRRQLDKLRVPAEQARTM 361

Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            F+ A +   + +  E+ AYA  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S 
Sbjct: 362 VFQTARALARSDA-GEKDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEFSD 420

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           AR  R++   SI  G+ N + LDVL  + +  +L
Sbjct: 421 ARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 454


>gi|33591863|ref|NP_879507.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571506|emb|CAE44996.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381280|gb|AEE66127.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 600

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 197/442 (44%), Gaps = 56/442 (12%)

Query: 43  LVALIANFPSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           L+AL A+   + H     + LGE +   T  ELA  A+ + P L      G   D++++H
Sbjct: 41  LLALCADTEELRHFTPHFDRLGE-LAGNTLDELADAADKHPPTLAPRDRHGRDVDRIDYH 99

Query: 101 PAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           PA+  + R +  +    +I        W     P+V+           YL +Q E G   
Sbjct: 100 PAYREMERIAFSEFGMAAIGHKPGVLGWPGHASPLVKYTL-------TYLFSQAEFG--- 149

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM-------QKTSVAIGLGLTEK 205
                       +  P    D A  +  R  D T K  M        +T + IG  +TE+
Sbjct: 150 ------------LLCPVNGNDAAVGMIQRYADDTLKQRMAGMLSQDMRTLLKIGHFMTER 197

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVP 259
            GG+D+A I +   +     + + G KWF S+  +D  ++LA+ EG       +G F+VP
Sbjct: 198 TGGSDLAGIGTHA-RFDGSAWKIYGEKWFYSAIDADYVLVLARPEGAPAGTRGLGMFVVP 256

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKIL 315
           RLLEDG+ N     RLKNK+G RS AT E+ F       +G     +  +  P+   +  
Sbjct: 257 RLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQGRDGIRYAVLPINASR-- 314

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + +   MR  L E++H+ARRR   G  +I  P+MKR++  I +    A +    
Sbjct: 315 --LSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKIMVPTEQALSACMF 372

Query: 376 LANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A++   A +    +    R+   + K+  C+    V   AME  GGSGYIEE   AR  
Sbjct: 373 VASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGGSGYIEEWINARLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++    +  G+ N   LD++ 
Sbjct: 433 RDAQTGLLWEGTSNINALDIVT 454


>gi|33603779|ref|NP_891339.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577904|emb|CAE35169.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 600

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 197/442 (44%), Gaps = 56/442 (12%)

Query: 43  LVALIANFPSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           L+AL A+   + H     + LGE +   T  ELA  A+ + P L      G   D++++H
Sbjct: 41  LLALCADTEELRHFTPHFDRLGE-LAGNTLDELADAADKHPPTLAPRDRHGRDVDRIDYH 99

Query: 101 PAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           PA+  + R +  +    +I        W     P+V+           YL +Q E G   
Sbjct: 100 PAYREMERIAFSEFGMAAIGHKPGVLGWPGHASPLVKYTL-------TYLFSQAEFG--- 149

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ-------KTSVAIGLGLTEK 205
                       +  P    D A  +  R  D T K  M        +T + IG  +TE+
Sbjct: 150 ------------LLCPVNGNDAAVGMIQRYADDTLKQRMTGMLSQDMRTLLKIGHFMTER 197

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVP 259
            GG+D+A I +   +     + + G KWF S+  +D  ++LA+ EG       +G F+VP
Sbjct: 198 TGGSDLAGIGTHA-RFDGSAWKIYGEKWFCSAIDADYVLVLARPEGAPAGTRGLGMFVVP 256

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKIL 315
           RLLEDG+ N     RLKNK+G RS AT E+ F       +G     +  +  P+   +  
Sbjct: 257 RLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQGRDGIRYAVLPINASR-- 314

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + +   MR  L E++H+ARRR   G  +I  P+MKR++  I +    A +    
Sbjct: 315 --LSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKIMVPTEQALSACMF 372

Query: 376 LANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A++   A +    +    R+   + K+  C+    V   AME  GGSGYIEE   AR  
Sbjct: 373 VASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGGSGYIEEWINARLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++    +  G+ N   LD++ 
Sbjct: 433 RDAQTGLLWEGTSNINALDIVT 454


>gi|121600118|ref|YP_993575.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|167003817|ref|ZP_02269597.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|121228928|gb|ABM51446.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|243060716|gb|EES42902.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 597

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 213/449 (47%), Gaps = 39/449 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             ++A    +A +   +A    RI+  + K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 367 FMQIALLLAKADTGDAQAGGCVRILTLLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   SI  G+ N + LDV   +++
Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455


>gi|33600084|ref|NP_887644.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567682|emb|CAE31596.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 552

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 213/453 (47%), Gaps = 38/453 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P  +G N Y +D+ L AL++ +  P ++      L  LGE +     ++LA  A+ +TP+
Sbjct: 15  PDSLGQNLYLADADLPALLSLYLAPDLLAHLTPHLHRLGE-LAGGRLEQLAAQADKHTPE 73

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAAR--- 139
           L      G    +V  HPA+  L R +  + GL  +    S  P V      + AA    
Sbjct: 74  LVVRTRQGHDCSEVVKHPAYVELERWAFSEFGLAAA----SHAPGVLGWHEPLPAAAKYT 129

Query: 140 -LYLMAQLEAGHLMSPSVTSASMVALMTT---PRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             YL +Q E G L  P   + S    +     P + + +  ++ S ++D   +  M    
Sbjct: 130 LFYLFSQSEYG-LTCPVNMTDSFTRTLKKYGEPALVQRYLARLTSLDFDTYYQGAMF--- 185

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVE---- 250
                 +TE+  G+DIA   +  ++  DG  + LSG KWF S+  +D  ++LA+ +    
Sbjct: 186 ------MTEQGAGSDIAQTAATARR--DGEHWLLSGDKWFCSNASADLAMVLARPDDAPA 237

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               V  FL+PR+  DG+PN     RLK+K+G RS A+ E+       +L+G++      
Sbjct: 238 GMAGVSLFLMPRVKADGTPNAYRIIRLKDKLGTRSMASGEIRLEGAQAYLIGEVGKGFQQ 297

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     L + + S + MR +L+EA + A  R   G  L D P+++R +  + L    
Sbjct: 298 MAEMVNSSRLSNGVRSGALMRRALSEASYVAEHRRAFGKRLADLPLIRRQLDKMRLMTEQ 357

Query: 369 ATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   ++  A +   A    E A    RIM P+ K+  C+ A  V  +AME  GG GYIEE
Sbjct: 358 ARTFAYHTAQALRGADEGDETARRVVRIMTPLIKFRACRDARKVTGDAMEVRGGCGYIEE 417

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              AR  R++   SI  G+ N + LDV   + +
Sbjct: 418 WPEARLLRDAHLGSIWEGTSNIVALDVYRAINR 450


>gi|118098887|ref|XP_415303.2| PREDICTED: similar to LOC446287 protein [Gallus gallus]
          Length = 586

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 215/487 (44%), Gaps = 40/487 (8%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFP----SVVHKELELLGEYVL 66
           M    + +++LF     P     N Y  D+LL + L A+ P      V +ELE  G  +L
Sbjct: 1   MPVARREAETLFQERPEP----GNQYLEDALLRSYLEAHLPPKVLEEVSQELEGFGNRLL 56

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   + L      N P    Y   G+R D +    AW  +   +  +GL    ++R +  
Sbjct: 57  T-KIRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLIAEAYERRYSN 115

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYD 184
             R      +A +LYL +    G     ++T  +A ++  + TP   K+    + SR  D
Sbjct: 116 WSRV----YQAVKLYLFSTASGGFNCPLAMTDGAAKVIESLGTPASLKNAFDHLTSR--D 169

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAF 243
           P       +     G  +TE+RGG+D+A  T    +K  DG Y L G KWF S+  SD  
Sbjct: 170 P-------RKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYRLYGFKWFTSAADSDMA 222

Query: 244 IMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           + LA++           G +  F +    E+   N +  QRLK K+G R  AT EL  + 
Sbjct: 223 LTLARIVDAEGHVKQGSGGLSLFFLRVRDEEEKLNSIQVQRLKEKLGTRQMATAELWLNG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+         + +M  +  + + I +V+ MR  ++ +  YA +R V G +L D P
Sbjct: 283 AKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSREYALKRVVFGKLLKDHP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKYWCCKMAPA 410
           +  + IA + +    A  L   +      A++     ++    R++ P+ K +  K A A
Sbjct: 343 LHMQTIARMEVQTRGAFLLLMEMVRLLGLAETNMASEQDQLLLRLLVPVAKLYTGKQATA 402

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFEQLF 469
           V  EAME  GG GY+E+  +    R++   SI  G+ N + LDVL  L K    +    F
Sbjct: 403 VATEAMESFGGQGYMEDTGLPVIVRDALVLSIWEGTTNVLSLDVLRSLTKSQGQVMAVFF 462

Query: 470 STLEQDL 476
           ST++  L
Sbjct: 463 STVQNKL 469


>gi|89272879|emb|CAJ82159.1| novel acyl-CoA-dehydrogenase protein [Xenopus (Silurana)
           tropicalis]
          Length = 587

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 32/425 (7%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L R    N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R   
Sbjct: 62  LGRDCELNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSRL-- 119

Query: 133 HKIRAARLYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             I+  +LYL +   AG    P   +  +A ++  +  P   +D    + SR  +P+N  
Sbjct: 120 --IQVVKLYLYSP-SAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSN-- 172

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                    G  +TE+RGG+D+A  T     +  DG Y L G+KWF S+  S+  + L +
Sbjct: 173 -----FWTSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGR 227

Query: 249 VEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           V    G           F +     +G+ NG+  QRLK K+G R   T EL         
Sbjct: 228 VVDNHGNTVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALK 287

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +         +  M  +  + + I +V+GMR  +  A  YA +R V G ++ D P+  + 
Sbjct: 288 ISPEGRGVASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQT 347

Query: 359 IADIALDIAAATALSFRLAN--SFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEA 415
           +A + ++   A  +   ++     +E    +E+     R++ P+TK +  K A +VI+E 
Sbjct: 348 MARMEVEARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEG 407

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474
           +EC GG GY+E+  +    R++   +I  G+ N + LDVL ++++    +   LFS  ++
Sbjct: 408 LECFGGQGYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQE 467

Query: 475 DLGSS 479
            L ++
Sbjct: 468 KLDAA 472


>gi|71896191|ref|NP_001025577.1| MGC107841 protein [Xenopus (Silurana) tropicalis]
 gi|60551258|gb|AAH91017.1| MGC107841 protein [Xenopus (Silurana) tropicalis]
          Length = 587

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 32/425 (7%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L R    N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R   
Sbjct: 62  LGRDCELNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSRL-- 119

Query: 133 HKIRAARLYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             I+  +LYL +   AG    P   +  +A ++  +  P   +D    + SR  +P+N  
Sbjct: 120 --IQVVKLYLYSP-SAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSN-- 172

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                    G  +TE+RGG+D+A  T     +  DG Y L G+KWF S+  S+  + L +
Sbjct: 173 -----FWTSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGR 227

Query: 249 VEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           V    G           F +     +G+ NG+  QRLK K+G R   T EL         
Sbjct: 228 VVDNHGNTVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALK 287

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +         +  M  +  + + I +V+GMR  +  A  YA +R V G ++ D P+  + 
Sbjct: 288 ISPEGRGVASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQT 347

Query: 359 IADIALDIAAATALSFRLAN--SFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEA 415
           +A + ++   A  +   ++     +E    +E+     R++ P+TK +  K A +VI+E 
Sbjct: 348 MARMEVEARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEG 407

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474
           +EC GG GY+E+  +    R++   +I  G+ N + LDVL ++++    +   LFS  ++
Sbjct: 408 LECFGGQGYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQE 467

Query: 475 DLGSS 479
            L ++
Sbjct: 468 KLDAA 472


>gi|237798438|ref|ZP_04586899.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021289|gb|EGI01346.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 242

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 116/214 (54%), Gaps = 2/214 (0%)

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I S + MR +L +A H+   R V G +L  QP+M+  +AD+AL+  AA AL+ RL  + D
Sbjct: 2   IGSSALMRQALTQATHHCAHRAVGGRLLAGQPLMQNVLADLALESEAALALTLRLGRALD 61

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS
Sbjct: 62  HLDD-DHERRFVRLITAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNS 120

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGL 500
              GSGN   LDVL  L K     + LF  L    G     + I+ L+ +     + +  
Sbjct: 121 TWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLALHISKLKTAFHDTGDIEYR 180

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           AR LTE IA+A     L  AG   ++D F+  R 
Sbjct: 181 ARQLTEDIAVAVQGKLLLEAGNAAVSDGFIAGRI 214


>gi|51258380|gb|AAH80048.1| LOC446287 protein [Xenopus laevis]
          Length = 636

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 192/422 (45%), Gaps = 32/422 (7%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L R    N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R   
Sbjct: 111 LGRDCELNLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVAEAYERRYSSWSRL-- 168

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPM 191
             I+  ++YL +   AG    P   +     ++ +  V     PK     Y+  T++ P 
Sbjct: 169 --IQVVKIYLYSP-SAGLFTCPLAMTDGAAKVIESLGV-----PKPLQNAYNHLTSRNP- 219

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
             +    G  +TE+RGG+D+A  T     +  DG Y L G+KWF S+  SD  + L +V 
Sbjct: 220 -SSFWTSGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWFTSATDSDMSLTLGRVV 278

Query: 251 GRVGCFLVPR------LLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              G  +V         LE    +G+ NG+  QRLK K+G R   T EL         + 
Sbjct: 279 DNHGNTVVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALQIS 338

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                   + +M  +  + + I +V+GMR  +  A  YA +R V G ++ + P+  + +A
Sbjct: 339 PEGRGVASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFVFGKLIKEHPLHIQTMA 398

Query: 361 DIALDIAAATALSF-----RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +++ A  A  F     RL    +   +  ++    R++ P+ K +  K A AVI+E 
Sbjct: 399 --RMEVEARGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAKLYTGKQALAVISEG 456

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474
           +EC GG GY+E+  +    R++   +I  G+ N + LDVL ++++    +    FST ++
Sbjct: 457 LECFGGQGYMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKSNGKVLSAFFSTAQE 516

Query: 475 DL 476
            L
Sbjct: 517 KL 518


>gi|268574760|ref|XP_002642359.1| Hypothetical protein CBG18356 [Caenorhabditis briggsae]
          Length = 615

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 216/480 (45%), Gaps = 38/480 (7%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMA 77
           F  + P L    N Y  D +L  ++    S      V ++L   G+ + S   Q L R A
Sbjct: 36  FNQDAPTLH---NPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITSEIDQ-LGRQA 91

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P+L      G+R DK+     W  L +    +G+    ++   +P VR+  H++  
Sbjct: 92  ELEQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR-IHQV-- 148

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--KDWAPKIFSR--EYDPTNKAPMQK 193
           A+L+L +   AG +  P   +   V  +T+  ++   + A +   R    DPT       
Sbjct: 149 AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYGKHELATETVDRLRSRDPTK------ 201

Query: 194 TSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--- 249
            +   G  +TEK+GG+D+A    +   +I    Y L G+KWF S+  +D  + LA+V   
Sbjct: 202 -AWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDS 260

Query: 250 -----EGRVGCFL-VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                EG  G  L + R+ +D G+ NG+   RLKNK+G +   T EL         +G+ 
Sbjct: 261 DGNAVEGSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQ 320

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +  + +A+ S+  MR  ++ A  Y+ +R V G      P+    IA +
Sbjct: 321 GRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKL 380

Query: 363 ALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            ++   +  L F   RL    +  KS   EA   R++ P+ K +  K A  +++E +EC 
Sbjct: 381 EIETRGSMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECF 440

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY+E+  +    R++    I  G+ N + LDVL +     N+       +EQ L ++
Sbjct: 441 GGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANT 500


>gi|309357473|emb|CAP35829.2| hypothetical protein CBG_18356 [Caenorhabditis briggsae AF16]
          Length = 616

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 216/480 (45%), Gaps = 38/480 (7%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMA 77
           F  + P L    N Y  D +L  ++    S      V ++L   G+ + S   Q L R A
Sbjct: 36  FNQDAPTLH---NPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITSEIDQ-LGRQA 91

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P+L      G+R DK+     W  L +    +G+    ++   +P VR+  H++  
Sbjct: 92  ELEQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR-IHQV-- 148

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--KDWAPKIFSR--EYDPTNKAPMQK 193
           A+L+L +   AG +  P   +   V  +T+  ++   + A +   R    DPT       
Sbjct: 149 AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYGKHELATETVDRLRSRDPTK------ 201

Query: 194 TSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--- 249
            +   G  +TEK+GG+D+A    +   +I    Y L G+KWF S+  +D  + LA+V   
Sbjct: 202 -AWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDS 260

Query: 250 -----EGRVGCFL-VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                EG  G  L + R+ +D G+ NG+   RLKNK+G +   T EL         +G+ 
Sbjct: 261 DGNAVEGSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQ 320

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +  + +A+ S+  MR  ++ A  Y+ +R V G      P+    IA +
Sbjct: 321 GRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKL 380

Query: 363 ALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            ++   +  L F   RL    +  KS   EA   R++ P+ K +  K A  +++E +EC 
Sbjct: 381 EIETRGSMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECF 440

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY+E+  +    R++    I  G+ N + LDVL +     N+       +EQ L ++
Sbjct: 441 GGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANT 500


>gi|42524329|ref|NP_969709.1| acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39576538|emb|CAE80702.1| probable acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 505

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 216/496 (43%), Gaps = 60/496 (12%)

Query: 35  NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLS---CTAQELARMANYNTPQLHA 86
           N + SD  L  ++     A+   V    LE LGE  ++     AQE       + P    
Sbjct: 13  NTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTDMLTWAQEAESQPPVHVP---- 68

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P G R D ++    W AL + +  +G+  + +DR F            A+R+Y MA L
Sbjct: 69  FDPWGRRIDDIKTSHGWKALEKVAAEEGIVATAYDRRFGA----------ASRVYQMALL 118

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM--------QKTSVAI 198
              +L SPS       A+ + P    D A +      D   KA +         KT    
Sbjct: 119 ---YLYSPSS------AIFSCPLAMTDGAARALELYADADLKARVLPHLLSRDPKTFWTA 169

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
           G  +TE+ GG+D++  ++     +        + L G KWF S+  S   + LA+ +G  
Sbjct: 170 GQWMTERTGGSDVSGTSTDAHPFTGTSEFGATHSLHGTKWFTSATTSQMALTLARPDGAA 229

Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +  F +    + G  N +   RLK+K+G ++  T EL    T   ++G +     
Sbjct: 230 PGSRGLSLFFLELRNDKGELNHIQIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVK 289

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  +  +  + ++I +V  +R +L  A  Y+ +R   G +L D P+ K  +  +  D  
Sbjct: 290 RIASVLNITRIYNSICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFR 349

Query: 368 AATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              A SF +AN   +    ++ + E    R++ PI K +  K +  + +E +E  GG+GY
Sbjct: 350 KCIAFSFFVANLLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVEMFGGAGY 409

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKK 482
           +E+  I R  R++   SI  G+ N + LD+L   EK     +Q    LEQ   L  +G +
Sbjct: 410 VEDTGIPRLLRDAQVFSIWEGTTNVLSLDMLRAFEK-----DQAGQILEQFLVLNEAGSE 464

Query: 483 VITILRDSISLCKEDK 498
            +  L+  ++L  E K
Sbjct: 465 ELVRLQKLLTLSGEQK 480


>gi|148222252|ref|NP_001086464.1| hypothetical protein LOC446287 [Xenopus laevis]
 gi|86577742|gb|AAI12957.1| LOC446287 protein [Xenopus laevis]
          Length = 587

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 189/429 (44%), Gaps = 46/429 (10%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L R    N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R   
Sbjct: 62  LGRDCELNLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVAEAYERRYSSWSRL-- 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR--EYDPTNKAP 190
             I+  ++YL          SPS        L T P    D A K+       +P   A 
Sbjct: 120 --IQVIKIYLY---------SPSA------GLFTCPLAMTDGAAKVIESLGVPEPLQNAY 162

Query: 191 MQKTS------VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAF 243
              TS         G  +TE+RGG+D+A  T     +  DG Y L G+KWF S+  SD  
Sbjct: 163 NHLTSRNPSSFWTSGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWFTSATDSDMS 222

Query: 244 IMLAQVEGRVGCFLVPR------LLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           + L +V    G  +V         LE    +G+ NG+  QRLK K+G R   T EL    
Sbjct: 223 LTLGRVVDNHGNTVVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                +         + +M  +  + + I +V+GMR  +  A  YA +R V G ++ + P
Sbjct: 283 VKALQISPEGRGVASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFVFGKLIKEHP 342

Query: 354 VMKRAIADIALDIAAATALSF-----RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +  + +A   +++ A  A  F     RL    +   +  ++    R++ P+ K +  K A
Sbjct: 343 LHIQTMA--RMEVEARGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAKLYTGKQA 400

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQ 467
            AVI+E +EC GG GY+E+  +    R++   +I  G+ N + LDVL ++++    +   
Sbjct: 401 LAVISEGLECFGGQGYMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKSNGKVLSA 460

Query: 468 LFSTLEQDL 476
            FST ++ L
Sbjct: 461 FFSTAQEKL 469


>gi|167895105|ref|ZP_02482507.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
          Length = 430

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 197/422 (46%), Gaps = 35/422 (8%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
               GE  + ++ HP +  L R +       ++  R   P        ++ A  +L  Q 
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAP-----PPLVKYALTFLFVQA 137

Query: 147 EAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           E G     S+T +    L    +  + + + P++ SR++D   +  M          +TE
Sbjct: 138 EFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------MTE 188

Query: 205 KRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
           +  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       + 
Sbjct: 189 QAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKGLA 248

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM  
Sbjct: 249 LFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADMIN 308

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L  
Sbjct: 309 MSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFM 368

Query: 375 RLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++A    +A +   +A    RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S AR 
Sbjct: 369 QIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDARV 428

Query: 434 YR 435
            R
Sbjct: 429 LR 430


>gi|238579210|ref|XP_002388976.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553]
 gi|215450767|gb|EEB89906.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553]
          Length = 548

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 188/411 (45%), Gaps = 37/411 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           ++L        PQL  Y   G R D++     W  L   +  +G+    ++R ++   R 
Sbjct: 12  RQLGSPHRVTPPQLVQYDQWGRRIDELRTSDGWKNLKATAQKEGIPAIFYERKYQEHSR- 70

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             +    A + +    EA   +S +  +A ++ L+ TP + K   P++ +R  DPT+   
Sbjct: 71  -VYGFVKAFMMVGDCHEAFCPISMTDGAARVLELLGTPGMKKHVFPRLIAR--DPTH--- 124

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-----YCLSGHKWFLSSPMSDAFIM 245
               +   G  +TE+ GG+D++ I +  Q +         Y L G KWF S+  SD  + 
Sbjct: 125 ----AFVSGQWMTERPGGSDVSQIETTAQHMGKTHRLGPHYLLHGFKWFSSATDSDISVA 180

Query: 246 LAQV----EGRVGC--FLVP------RLLEDGSP----NGLCYQRLKNKIGNRSNATVEL 289
           LA+     EG  G   FLVP      R   D +P    NG+   RLKNKIG  +  T EL
Sbjct: 181 LARTGTLQEGSRGLSLFLVPLRRPLLRDPTDPTPSPISNGIRVHRLKNKIGTHTLPTAEL 240

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
               T G+L+G        +  +  +  + SAI S   +R  LA A  Y+  R ++GG  
Sbjct: 241 SLEYTEGYLIGKPGQGVRSITPLLNITRVWSAIASTGALRRCLAIATAYSDVRAINGGKT 300

Query: 348 ILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            L D P+    +A I+L   A T L+F   RL    +   +  +E    R++ P+ K + 
Sbjct: 301 FLRDTPIHVAQLAKISLVYRALTHLTFGVIRLVGKTECNVADEQEKLQLRLLTPLVKAFA 360

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            + A   + EAM  +GG+GY+EE  I R  R++    I  G+   + LD++
Sbjct: 361 AEKAVTAMEEAMTALGGAGYMEENDIGRMIRDALVEKIWEGTTTVLALDLV 411


>gi|198434786|ref|XP_002132169.1| PREDICTED: similar to MGC107841 protein [Ciona intestinalis]
          Length = 623

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 207/488 (42%), Gaps = 59/488 (12%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGE 63
           R    + HQ +   F    P +   +N Y  D LL + +  N P      +  +L+  GE
Sbjct: 26  RCKNTKYHQAAVGSFTQEAPSV---LNPYQCDGLLKSYLQRNIPKEHFQHISMDLQNFGE 82

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +    E+ +    + P L  Y   G R ++VE    W+ +   S  +GL    + R 
Sbjct: 83  TIKN-EITEMGQKCEASPPTLKQYDAWGNRINQVETCNEWNQMKNISAREGLIAHGYTRQ 141

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F           + +R+Y  A+L    L SP         +   P    D A  +  R  
Sbjct: 142 FG----------KYSRIYQFAKL---FLFSPCS------GMYACPLAMTDGAALVLERVL 182

Query: 184 DPTNK-------------APMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLS 229
           + + +             +P   T    G  +TEK GG+D+A  T     K  D  Y L 
Sbjct: 183 NSSEEKHSILLKAFKCLTSPNPDTFWTSGQWMTEKAGGSDVANATDTFAYKQDDKTYKLF 242

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVG-----------CFLVPRLLEDGSP---NGLCYQRL 275
           G+KWF S+  +D  + LA+V  R G            +L  R  +   P   NG   +RL
Sbjct: 243 GYKWFTSATDADMALTLARVVDRDGNSLSGTKGLSLFYLETRDEDKKLPSGLNGFQVERL 302

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           K+K+G R   T EL    T   ++GD +     +  M  +  + +++ S + MR  L  +
Sbjct: 303 KDKLGTRQLPTGELLLDGTVAHMVGDRSNGIRLISGMLTVTRIHNSVWSAASMRRLLLLS 362

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--SFDEAKSRSE-EAAY 392
             YA +R   G +L D P+  + +A + ++  AA  ++F +       E K  SE +   
Sbjct: 363 KDYATKRSAFGSLLNDHPLHMQTLARMEIESRAAFLVTFEVVRLLGLIEVKEGSEIDNDM 422

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            R++ P+ K +  K A AV +E +E  GG+GY+E+  +    R++   SI  G+ N + L
Sbjct: 423 LRLLTPLAKLYTAKQAIAVASEGLESFGGAGYLEDTGLPSFLRDAQVLSIWEGTTNVLSL 482

Query: 453 DVLNLLEK 460
           D L  + K
Sbjct: 483 DTLRAIAK 490


>gi|196010794|ref|XP_002115261.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens]
 gi|190582032|gb|EDV22106.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens]
          Length = 545

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 48/432 (11%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E  R A  N PQL  +   G R +++E    W ++   S  +GL    +++ +       
Sbjct: 23  ENGRQAELNPPQLVTHDAWGRRINRLETSSGWKSMHAVSAQEGLVAIPYEKKY------- 75

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS---REYDP--- 185
                 +R+Y +A+L   H  S          L T P    D A K+     +E      
Sbjct: 76  ---AEWSRIYQVAKLSLFHCSS---------GLYTCPLAMTDGAAKVIEGIRKEKKSIYL 123

Query: 186 -------TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                  T++ P Q  +   G  +TEKRGG+D+    +   K S+G Y L G KWF S+ 
Sbjct: 124 LNAYSRLTSRDPEQFWTS--GQWMTEKRGGSDVGNTETIAIKYSNGRYKLYGDKWFTSAV 181

Query: 239 MSDAFIMLAQVEG----------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            S+    LA++                F +     DG  N +   RLKNK+G R   T E
Sbjct: 182 DSNIAFTLAKIANDKSNTPAGGDNPSLFYLETRNPDGELNNINVNRLKNKLGTRQLPTAE 241

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           L    T    + +       +  M  +  L ++I +V  MR  L  A  YA++R      
Sbjct: 242 LTLDGTIAEKVSEDGRGVSGISPMLTITRLHNSISAVGSMRRILTLAEAYAKQRTAFRKY 301

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLAN--SFDE-AKSRSEEAAYARIMAPITKYWCC 405
           L   P+  R +  + ++   A  L   L      +E  KS  +     R++ PITK +  
Sbjct: 302 LCQHPLHARTLTQMEVESRGALLLVMELGRLIGLEECGKSNEQNLNLMRLLVPITKLYTA 361

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNL 464
           K A  +++E +EC GG GYIE+  +   +R++    I  G+ N + LDVL +L +   ++
Sbjct: 362 KQAMQIVSEGLECFGGQGYIEDTGLPTIFRDAQVLPIWEGTTNILSLDVLRSLFKSKGSV 421

Query: 465 FEQLFSTLEQDL 476
            +   S++++ L
Sbjct: 422 LQAFLSSVQERL 433


>gi|260803587|ref|XP_002596671.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae]
 gi|229281930|gb|EEN52683.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae]
          Length = 632

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 182/422 (43%), Gaps = 45/422 (10%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +L R    N P L  Y   G R D+V    AW  L   S  +G+    ++R F       
Sbjct: 109 DLGRECELNPPYLQQYDAWGRRTDEVVTCQAWRTLHDISAQEGIIAIPYEREFG------ 162

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT----- 186
               + +RLY +A+L   H+ +P+        L + P    D A K+     D       
Sbjct: 163 ----QWSRLYQVAKL---HMFNPAS------GLYSCPLAMTDGATKVAESTGDSVLMQTA 209

Query: 187 -----NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMS 240
                ++ P Q  +   G  +TE+RGG+D+A  T        DG + L G+KWF S+  +
Sbjct: 210 FPHLVSRNPAQFWTS--GQWMTERRGGSDVANGTETVAVPQEDGTHRLYGYKWFSSATDA 267

Query: 241 DAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           D  + LA+V        +G  G   F +      G  N +  QRLKNK+G R   T EL 
Sbjct: 268 DMTLTLARVMDSSGEVVQGTRGLSLFYLETRDSSGQLNNIQVQRLKNKLGTRQLPTGELL 327

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                   + D       + DM  +  + +++M+   MR  L  A  Y+ RR V G ++ 
Sbjct: 328 LDGAVAHKVSDDGRGVAAIADMLTITRIHNSLMASGCMRRLLNLARDYSTRRRVFGKLIC 387

Query: 351 DQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           + P+  + +A +  +   AT L     RL    D   +  ++    R++ P+TK +  K 
Sbjct: 388 EHPLHMQTLARLETETRGATLLVLEVGRLLGLQDCKMASEQDELMLRLITPLTKLYTAKQ 447

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A A+ +E +E  GG GYIE+  +    R++   SI  G+ N +  DVL  L K      Q
Sbjct: 448 AVALCSEGLESFGGQGYIEDTGLPTFLRDAQVLSIWEGTTNVLSHDVLRSLVKTKGAVLQ 507

Query: 468 LF 469
            F
Sbjct: 508 AF 509


>gi|289748322|ref|ZP_06507700.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92]
 gi|289688909|gb|EFD56338.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92]
          Length = 359

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 19/244 (7%)

Query: 244 IMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++LA+ EG       V  FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   F
Sbjct: 1   MVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAF 60

Query: 298 LL-GDLNVSTGPVE--------DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           LL G+ +   GP +        ++   + L +A  ++   R +L E++ YA +R   GG 
Sbjct: 61  LLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGA 120

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           LID+P+M+R +A++ +D+ AA A+ F   + F  A  R       RI  P+TK   C++ 
Sbjct: 121 LIDKPLMRRKLAEMVVDVEAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLG 177

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
             V ++A+E  GG+GYIE   +AR  R++  N+I  G  N + LDV   +E+ T   E L
Sbjct: 178 ITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETL 236

Query: 469 FSTL 472
            + L
Sbjct: 237 LARL 240


>gi|270159432|ref|ZP_06188088.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae
           D-4968]
 gi|289165758|ref|YP_003455896.1| acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269987771|gb|EEZ94026.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae
           D-4968]
 gi|288858931|emb|CBJ12856.1| putative acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 562

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 213/484 (44%), Gaps = 41/484 (8%)

Query: 27  QPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           Q P  +G N Y  D +L A     L  +  + +  EL  LG+  +    Q L + A    
Sbjct: 6   QTPPCLG-NQYDDDRILKAYLEWKLPPSMLTEIQPELHHLGQRAIEDIYQ-LGQEAEAYP 63

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   Y P G+R D +E   AW  L + S  + L    ++R      R   H+   A++Y
Sbjct: 64  PKHIPYDPWGKRIDHIEVSRAWKELDKISAEEKLIAIGYERRHGAFSR--IHQF--AKIY 119

Query: 142 LMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           L     A +    ++T  +  AL      P  H+   P + S   DPT            
Sbjct: 120 LFHPSSAIYTCPLAMTDGAARALELYADKPLKHRV-LPHLISS--DPTQ-------FWTS 169

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVG 254
           G  +TE+ GG+D++  TS   K     + L+G KWF S+  S   + LA++EG      G
Sbjct: 170 GQWMTERTGGSDVSG-TSTTAKPEGTYFLLNGDKWFTSATTSQIAMTLARIEGAPEGSKG 228

Query: 255 CFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             L    L D  G  NG+   RLK+K+G R+  T EL   NT   L+G        +  +
Sbjct: 229 LSLFYLELRDQMGKLNGISINRLKDKLGTRALPTAELTLKNTRALLIGGAGDGVKKISSL 288

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  + +A  +V  MR ++A A  YA +R   G  L    +    +A++ ++  AA  L
Sbjct: 289 FNITRIYNACCAVGYMRRAIALARDYATKRVSFGHTLSKHGLHLETLANMQIEFTAAFHL 348

Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            F    L    +  ++   E A  R++ P+ K +  K A ++ +EA+E  GG+GYIE+  
Sbjct: 349 VFHAIELLGKDELGEASQAERAVLRLLTPLVKLYSAKQAISLASEALESFGGAGYIEDTG 408

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLE----QDLGSSGKK 482
           + +  R +   SI  G+ N + LDVL  + K        E +   LE    QDL  S  K
Sbjct: 409 LPQLLRNAQVLSIWEGTTNILSLDVLRAIHKENAAVAFLEDIHKRLEQIKLQDLIQSKVK 468

Query: 483 VITI 486
           V  I
Sbjct: 469 VQYI 472


>gi|330823859|ref|YP_004387162.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309231|gb|AEB83646.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 612

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 186/402 (46%), Gaps = 34/402 (8%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWH-----ALLRRSIHDGLH---CSIWDRS 123
           ELA +A+ + P LHA    GE  D VE+HPA+      A  +   H   H      +  +
Sbjct: 74  ELATVADKHGPVLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGT 133

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSR 181
             PV +        A  YL  Q E G +   SVT  S  ++    +  +     P++ + 
Sbjct: 134 LSPVTKY-------AFQYLFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLPRMLAE 186

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           + +   K             +TEK GG+D+  + +  + I DG + L G KWF S   +D
Sbjct: 187 KLEDLWKGTQ---------FMTEKAGGSDVGQVETTARLI-DGQWHLFGEKWFSSHVDAD 236

Query: 242 AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             ++LA+ E        +  F +PR  EDGS N     RLK+K+G RS A+ EL     F
Sbjct: 237 VALILARPENAPAGTRGLALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAF 296

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +L+GD       + +   L  L  A+ + + MR  L EA+  A  RH  G  ++D P+M
Sbjct: 297 AYLVGDPTRGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLM 356

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAE 414
           +R +  I +   AA +++   A+   +  +  ++AA A R++ P+ K   C+    V   
Sbjct: 357 QRQLLKIMVPTEAALSVTLATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATG 416

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           AME  GG+GYIE+   AR  R++    +  G+ N   LD + 
Sbjct: 417 AMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIG 458


>gi|33595570|ref|NP_883213.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565648|emb|CAE40296.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 615

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 210/482 (43%), Gaps = 67/482 (13%)

Query: 16  HQPSDSLFALNQP-----------PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY 64
           +QP    FA  +P           P   G++ ++ D  L  L++ +  V   ELE    +
Sbjct: 3   YQPDYGSFARKRPARSTQSSEKLAPDCAGLDFFAIDPSLQQLLSVY--VPGAELEYFRPH 60

Query: 65  ------VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
                 +      ELA +A+ + P LHA    GE  D +E+HPA+  +         H +
Sbjct: 61  FERMGKLAGGRLNELAMVADKHGPVLHARSRWGEDEDWIEYHPAYQEME--------HIA 112

Query: 119 IWDRSFEPVVRKQAHKIRAARL---------YLMAQLEAGHLMSPSVTSAS--MVALMTT 167
                F  +  +      A  L         YL  Q E G +   SVT  S  ++    +
Sbjct: 113 FEQFQFHAMTHRPGAMGYAGTLSPITKYVFQYLFVQSEFGQMCPISVTDTSIHLIRKFGS 172

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +     P++ +       K             +TEK GG+D+  + +  ++I DG + 
Sbjct: 173 EALQARLLPRMLADNLQDLWKGTQ---------FMTEKSGGSDVGQVETTARQI-DGQWH 222

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           L G KWF S   +D  ++LA+ EG       +  F +PR  EDGS N     RLK+K+G 
Sbjct: 223 LHGEKWFSSHVDADIALILARPEGAPAGTRGLALFAMPRYREDGSRNSYRIVRLKDKLGT 282

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           RS A+ EL     F +L+GD      P +D+K ++       L  A+ + + MR  L E+
Sbjct: 283 RSMASGELRIDGAFAYLVGD------PTQDIKQMMEQVNLSRLSHAVRAAAMMRRCLNES 336

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYAR 394
           +  AR R   G  ++D P+M+R +  + +   AA  ++   A++  +A     +  A  R
Sbjct: 337 MQAARHRQAFGRQVVDYPLMQRQLLKLLVPTEAALTMTMATADAMAKAYGGDAQCKAALR 396

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K   C+    V   AME  GG+GYIE+   AR  R++    +  G+ N   LD 
Sbjct: 397 LLTPLLKLRACRDNVTVATGAMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDA 456

Query: 455 LN 456
           + 
Sbjct: 457 IE 458


>gi|33599969|ref|NP_887529.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567567|emb|CAE31480.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 615

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 206/476 (43%), Gaps = 55/476 (11%)

Query: 16  HQPSDSLFALNQP-----------PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY 64
           +QP    FA  +P           P   G++ ++ D  L  L++ +  V   ELE    +
Sbjct: 3   YQPDYGSFARKRPARSTQSSEKLAPDCAGLDFFAIDPSLQQLLSVY--VPGAELEYFRPH 60

Query: 65  ------VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
                 +      ELA +A+ + P LHA    GE  D +E+HPA+  +         H +
Sbjct: 61  FERMGKLAGGRLNELAMVADKHGPVLHARSRWGEDEDWIEYHPAYQEME--------HIA 112

Query: 119 IWDRSFEPVVRKQAHKIRAARL---------YLMAQLEAGHLMSPSVTSAS--MVALMTT 167
                F  +  +      A  L         YL  Q E G +   SVT  S  ++    +
Sbjct: 113 FEQFQFHAMTHRPGAMGYAGTLSPVTKYVFQYLFVQSEFGQMCPISVTDTSIHLIRKFGS 172

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +     P++ +       K             +TEK GG+D+  + +  ++I DG + 
Sbjct: 173 EALQARLLPRMLADNLQDLWKGTQ---------FMTEKSGGSDVGQVETTARQI-DGQWH 222

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           L G KWF S   +D  ++LA+ EG       +  F +PR  EDGS N     RLK+K+G 
Sbjct: 223 LHGEKWFSSHVDADIALILARPEGAPAGTRGLALFAMPRYREDGSRNSYRIVRLKDKLGT 282

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           RS A+ EL     F +L+GD       + +   L  L  A+ + + MR  L E++  AR 
Sbjct: 283 RSMASGELRIDGAFAYLVGDPTQGIKQMMEQVNLSRLSHAVRAAAMMRRCLNESMQAARH 342

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPIT 400
           R   G  ++D P+M+R +  + +   AA  ++   A++  +A     +  A  R++ P+ 
Sbjct: 343 RQAFGRQVVDYPLMQRQLLKLLVPTEAALTMTMATADAMAKAYGGDAQCKAALRLLTPLL 402

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K   C+    V   AME  GG+GYIE+   AR  R++    +  G+ N   LD + 
Sbjct: 403 KLRACRDNVTVATGAMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIE 458


>gi|66826751|ref|XP_646730.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4]
 gi|60474589|gb|EAL72526.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4]
          Length = 628

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 66/516 (12%)

Query: 26  NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYN 80
            Q PL    N Y  D+ L+ AL    P+ + KE+E      GE V+     EL R +  N
Sbjct: 22  QQSPLL--GNQYIEDTQLIRALQRVLPAKILKEIEGDLTQFGERVVKDIL-ELGRASENN 78

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y   G+R DK+    +W+ L      +GL    ++R ++   R   +     ++
Sbjct: 79  PPKLIQYDAWGKRIDKIVVDESWNKLKDIGCSEGLVSIGYERKYQEYSRIYQY----IKI 134

Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL A   A     MS +  +A ++ L     + +D      SR  DP       KT    
Sbjct: 135 YLFACSSAVFDCPMSMTDGAARLIELYGDKGMKEDEYKHFISR--DP-------KTFWTS 185

Query: 199 GLGLTEKRGGTDIA-----AITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLAQ---- 248
           G  +TEK GG+D++     A++S      DG  C LSG+K+F S+  S+  ++LA+    
Sbjct: 186 GQWMTEKTGGSDVSKSETIAVSSGS---GDGKTCNLSGYKYFTSATTSEGAMVLARDVDD 242

Query: 249 -------VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                  VEG  G   + +     +G  + +   +LKNK G ++  T ELE   T    +
Sbjct: 243 AKTMKGAVEGSRGLSVYFIKLRKPNGELDRIQVHKLKNKFGTKAVPTAELELMGTPAVRV 302

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G        +  +  +  + + I S + MR  +A    +A RR V G +L D  +    +
Sbjct: 303 GPKGRGVPVIASILNITRIHNVIHSAATMRRCVAIVRDFAHRRTVFGKLLKDNLLYLSTL 362

Query: 360 ADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMA 408
           A++ L+  A+  L         +     ++  S SEE        RI+ P++K +  K +
Sbjct: 363 AEMELEFRASLHLLLDVTLLLGKSERIVEKQSSNSEEQKQIDLLLRIVTPLSKLYTAKQS 422

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
             V +EA+E +GG+GY+E+  + R +R++   SI  G+ N + +D+   L++   + +  
Sbjct: 423 VTVASEAIEALGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDIWRTLKEPLTI-KFY 481

Query: 469 FSTLEQDLGSSGK---------KVITILRDSISLCK 495
           F ++E  L  + K         KVI+++R+++   +
Sbjct: 482 FQSIENRLIQANKLLNNDNNIQKVISVIREAMKTIR 517


>gi|126324967|ref|XP_001380314.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 669

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 206/482 (42%), Gaps = 54/482 (11%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVA-LIANFPSVV----HKELELLGEYVLSCTAQELARMA 77
           F   QP L    N Y  D+LL   L  + P  V    +++L+  G  V S     L +  
Sbjct: 83  FFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEANQDLQRFGARV-SGEILSLGQDC 138

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P+L  +   G+R D +   PAW  L   S  +GL    ++R      R      +A
Sbjct: 139 EAMPPRLQQFDAWGKRVDLILTCPAWKKLKGISAEEGLIAIAYERKHSNWSRV----YQA 194

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+L++ +               S   + T P    D A K+   E   ++  P +  S  
Sbjct: 195 AKLFMFS---------------SSSGMFTCPLAMTDGATKVL--EVMKSSGPPGEAFSHL 237

Query: 198 I----------GLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIML 246
           I          G  +TE++GG+D+A  T     K  DG Y L G KWF S+  +D  + L
Sbjct: 238 ISRDPKLFWTSGQWMTERKGGSDVAHGTETVACKQDDGTYKLYGFKWFTSATDADMTMAL 297

Query: 247 AQV---EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           A++   +G V         F +    E G  NGL  QRLK K+G     T EL       
Sbjct: 298 ARIMDAQGSVTKGTQGLSLFFLKLRDEQGQLNGLEVQRLKEKLGTHQLPTAELLLDGAQA 357

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+         + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  
Sbjct: 358 HLVSQEGRGVATIANMLNVTRIYNSIGAVGSMRRMVFMARDYATQRFVFGKFIKDHPLHT 417

Query: 357 RAIADIALDIAAATALSFRLAN--SFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +A + + +     L   L      +E   + ++++   R++A + K +  K A A+++
Sbjct: 418 QTLARMEVQVRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVS 477

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           E +EC GG GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   
Sbjct: 478 EGLECFGGQGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASV 537

Query: 474 QD 475
           QD
Sbjct: 538 QD 539


>gi|162454035|ref|YP_001616402.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161164617|emb|CAN95922.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 562

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 203/459 (44%), Gaps = 33/459 (7%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ-ELARM 76
            A  Q P  +G N Y  D +L + +A        + +   L  +GE       Q +LA  
Sbjct: 1   MAFYQDPPTLG-NQYDDDRVLRSYLARALPREVAASITPSLREMGELAGGRLYQLQLADR 59

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L ++   G R D VE    W    R +   G+  + ++R+     R   H+  
Sbjct: 60  AN--EPKLTSWDAWGRRIDHVEVTELWKEAARIACERGVVATAYERAHGAFSR--VHQFA 115

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTP-RVHKDWA-PKIFSREYDPTNKAPMQKT 194
            A  YL       +    ++T  +   L+ +  R   D A P++ SR  DP         
Sbjct: 116 LA--YLFDASSDVYTCPLAMTDGAARTLLASDNRALIDRAVPRLTSR--DPA-------A 164

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
           +   G  +TE+ GG+D+    +  +   DG Y L G KWF SS  S+  + LA+ EG   
Sbjct: 165 AWTSGQWMTERTGGSDVGRSETAARLGPDGAYRLHGTKWFASSTTSEMALTLARPEGNPE 224

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  F V    E G   G+   RLK+K+G R   T EL         +  L+     
Sbjct: 225 GSRGLALFYVELAGEAGRREGVLINRLKDKLGTRKVPTAELTLDGVLATPVAGLSNGVRA 284

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +    +AI +++GMR  LA A  YA+ R   G  L ++P+    +A++  +   
Sbjct: 285 IAPMLNVTRTWNAIGAIAGMRRGLALARSYAQSRVQFGTTLAEKPLHMDTLAELQAEFEG 344

Query: 369 ATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           A  L+FR        ++ S    EA   R++ P+ K    K A +V++E +E  GG+GY+
Sbjct: 345 AFHLTFRAIELLGREETGSLTDSEAKLLRLIIPLAKLTTAKQAVSVLSEVLEAFGGAGYV 404

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E+  + R  R++   +I  G+ N + LD L ++ K  +L
Sbjct: 405 EDTGLPRLLRDAQVLTIWEGTTNVLALDALRVILKDGSL 443


>gi|302562000|ref|ZP_07314342.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479618|gb|EFL42711.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 215

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 106/188 (56%), Gaps = 5/188 (2%)

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMA 408
           +DQP+M+  +AD+AL+  AAT L+ RLA + D A +  + EAA+ RI   + KYW  K  
Sbjct: 1   MDQPLMRNVLADLALESEAATTLTLRLAGAADRAVRGDAGEAAFRRIATAVGKYWVTKRG 60

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           PA  AEA+EC+GG+GY+E+  + RHYRE+P  SI  GSGN   LDVL  L + T   + L
Sbjct: 61  PAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIWEGSGNVNALDVLRALGRDTATAQAL 120

Query: 469 FSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
           F  L    G+  +    +  L+D   L +  +  AR L E++AL    + L R     ++
Sbjct: 121 FDELALTRGADARLDAAVAGLKD--QLAEGSQAGARRLVERMALTLQGSLLVRHAPPAVS 178

Query: 527 DVFLENRF 534
           D F   R 
Sbjct: 179 DAFCATRL 186


>gi|229541648|ref|ZP_04430708.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326068|gb|EEN91743.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 552

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 205/449 (45%), Gaps = 38/449 (8%)

Query: 34  MNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y  D  L  L+       F     KEL   GE       +          P+L  Y 
Sbjct: 1   MNFYHDDPNLARLLKQYLDPLFFDWAEKELAEFGEMCAGEIDERATHTDREGQPKLIKYN 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYLM 143
             GE   +V  +  +   + +  + G+    H  I      P + ++ + + A A+ YL+
Sbjct: 61  RYGEDVSRVWVNEGYFKTVEQVYNKGIVGYVHKPI------PALGQKGNYVYAFAQGYLL 114

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +Q E G     ++T+A+   L    +  + + + P++ S     T +A   + +      
Sbjct: 115 SQSELGFYCPVTLTAAASYLLDHYGSHELKQTYLPQLIS-----TGEAERYEGATF---- 165

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VG 254
           LTE++GG+D+ A  ++     DG Y L G K+F S+  M    ++LA+ EG       + 
Sbjct: 166 LTERQGGSDVGANETKAVS-EDGCYRLYGEKYFASNVGMCGVAMVLARREGAPSGTKGLS 224

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP   E+G  NG+  +RLK+K+G R+  + E+ F     +L+GD       + +   
Sbjct: 225 LFLVPWEKENGEKNGIYIRRLKDKLGVRAVPSGEVVFDGAKAYLVGDPRKGFYYMMEALN 284

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  + +A+ S+  MR +  EA  YA RR   G  L D P++K  +  +A      T+  F
Sbjct: 285 LSRICNAVASIGIMRRAYREARAYALRRTAFGSRLADYPMVKETLVKMAAKQEVETSAVF 344

Query: 375 RLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           RLA  FD     K+  +E   AR++  I K    + A     EA+E  GG+GYIE+    
Sbjct: 345 RLATLFDRTASGKADEKENIMARLLIAILKMETAEQAIHFAHEAIEMHGGNGYIEDFVTP 404

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   ++  G+ N + L+VL L+ K
Sbjct: 405 RLLRDAQVLTVWEGTANILGLEVLRLMRK 433


>gi|332973175|gb|EGK11110.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 604

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 37/458 (8%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYN 80
           N P   +  N Y  D  L  L+  + P+ +H    +EL  LG  V     Q  A      
Sbjct: 20  NIPRPTVEPNFYLEDFNLQYLMRRYLPASMHQWADRELTHLGARVAGPIDQRAAYTDGEG 79

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y   GE   ++  +  +   ++     G+   ++ R    + RK  +     + 
Sbjct: 80  QPRLVRYNRRGEEISQIVKNEGYLKTVKEVYGAGIVGYLY-REVPELGRKAPYLYSYLQG 138

Query: 141 YLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL+++ E G    ++ ++++A ++    TP   + +   + S +         ++T    
Sbjct: 139 YLLSESEPGFYCPVTLTLSAAHLIDRYGTPAQKETYLTGLTSLD---------EETLYEG 189

Query: 199 GLGLTEKRGGTDIAA---ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-- 253
              LTE++GG+D+ A   + +   +   G+Y L+G K+F     S+A  M+A V  R+  
Sbjct: 190 ATWLTERQGGSDVGANLTVATADPEAGPGVYRLTGEKFF----ASNAGAMVATVLARIHP 245

Query: 254 --------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                   G FLVP +  DG+ N +  +RLK K+G  +  + E+      G+L+GD +  
Sbjct: 246 DRPGTRGLGLFLVPWIKPDGTRNRIYVRRLKEKLGVNAVPSAEVILEEAEGYLIGDPDQG 305

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +   +  + +A+ +   MR +  EA HYAR RH  G  ++   ++K+ +A++ ++
Sbjct: 306 FKYMAEALNISRICNAVAATGIMRRAWYEAFHYARERHAFGRPILQYSMVKQTLAEMLME 365

Query: 366 IAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +   T  +F + + FD+  S     E+   AR++  + KY   + A  +  +A+E +GG+
Sbjct: 366 LEVNTGSTFDMIHLFDKVNSGQAAPEKEVMARMLISLLKYRTGEAAKEMTHQAIETLGGN 425

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GYIEE    R  R++   ++  G+ N + LD+  ++ K
Sbjct: 426 GYIEEYVTPRLLRDAQVLTVWEGTANILALDLWRVIRK 463


>gi|332083187|gb|EGI88418.1| protein aidB domain protein [Shigella boydii 5216-82]
          Length = 259

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA
Sbjct: 4   FDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLA 63

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 64  RAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREM 122

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    L K  
Sbjct: 123 PVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPA 182

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + L R +T ++ L    A + +     +A  + +
Sbjct: 183 EELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 216


>gi|319763877|ref|YP_004127814.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118438|gb|ADV00927.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 612

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 34/402 (8%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWH-----ALLRRSIHDGLH---CSIWDRS 123
           ELA +A+ + P LHA    GE  D VE+HPA+      A  +   H   H      +  +
Sbjct: 74  ELATVADKHGPVLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGT 133

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSR 181
             PV +        A  YL  Q E G +   SVT  S  ++    +  +      ++ + 
Sbjct: 134 LSPVTKY-------AFQYLFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLQRMLAE 186

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           + +   K             +TEK GG+D+  + +  + I DG + L G KWF S   +D
Sbjct: 187 KLEDLWKGTQ---------FMTEKAGGSDVGQVETTARLI-DGQWHLFGEKWFSSHVDAD 236

Query: 242 AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             ++LA+ E        +  F +PR  EDGS N     RLK+K+G RS A+ EL     F
Sbjct: 237 VALILARPENAPAGTRGLALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAF 296

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +L+GD       + +   L  L  A+ + + MR  L EA+  A  RH  G  ++D P+M
Sbjct: 297 AYLVGDPTRGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLM 356

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAE 414
           +R +  I +   AA +++   A+   +  +  ++AA A R++ P+ K   C+    V   
Sbjct: 357 QRQLLKIMVPTEAALSVTLATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATG 416

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           AME  GG+GYIE+   AR  R++    +  G+ N   LD + 
Sbjct: 417 AMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIG 458


>gi|126324963|ref|XP_001380274.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 633

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 201/480 (41%), Gaps = 50/480 (10%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMA 77
           F   QP L    N Y  D+LL   +     P V   V+++L+  G  V S     L +  
Sbjct: 47  FFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEVNQDLQRFGARV-SGEILSLGQEC 102

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P+L  +   G+R D +    AW  L R S  +GL    ++R +             
Sbjct: 103 EAMPPRLQHFDGWGQRVDHILTCSAWKKLKRISAEEGLIAIGYERKYS----------NW 152

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS--REYDPTNKAPMQKTS 195
           +R+Y  A+L    +  PS        + + P    D A K+    +   P  +A    TS
Sbjct: 153 SRVYQAAKL---FMFCPSS------GMFSCPLAMTDGATKVLEVMKSSGPPGEAFSHLTS 203

Query: 196 ------VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                    G  +TE++GG+D+A  T     K  DG Y L G KWF S+  +D  + LA+
Sbjct: 204 RDPKLFWTSGQWMTERKGGSDVAHGTETVACKQDDGTYKLFGFKWFTSATDADMTLALAR 263

Query: 249 V---EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +   +G V         F +    E G  NGL  QRLK K+G     T EL        L
Sbjct: 264 IMDAQGSVTKGTQGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHL 323

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +         + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  + 
Sbjct: 324 VSQEGRGVATIANMLNITRIYNSISAVGYMRRIVFMARDYATQRFVFGKFIKDHPLHTQT 383

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEA 415
           +A + + +     L   L+ S  + + +S         R + PI        A A+++E 
Sbjct: 384 LARMEVQVRGGFLLVMELSRSLGKWRLQSSAQKIRGIFRGLTPIAGQTLSSQAVAIVSEG 443

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +EC GG GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   QD
Sbjct: 444 LECFGGQGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQD 503


>gi|322370195|ref|ZP_08044757.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320550531|gb|EFW92183.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 568

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 206/448 (45%), Gaps = 37/448 (8%)

Query: 33  GMNAYSSDSLLVALIA-NFPSVVHKELELLGEY--VLSCTAQELARMANYNTPQLHAYGP 89
           GMN +  D +L   +   +P       E   E+  ++  T    +   + + P+L  Y  
Sbjct: 13  GMNYWQYDPVLQHEVERTYPGDRGWAEERFDEFGAIVGTTVAPNSDTIDEHGPELRQYDR 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE--PVVRKQAHKIRAARL-YLMAQL 146
            G   + +E+HPA   L    +  G    I   SF   P     A  +    + YL+A  
Sbjct: 73  HGRLVNDIEYHPA--QLENEELVYG--AGIVADSFRAPPDRDDPASMLHHLTMDYLLAYA 128

Query: 147 EAGHLMSPSVTSASMVALMTTPRVH------KDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           + G L  P   +A  VAL+     H       ++  ++ +REYD   +  M         
Sbjct: 129 DVG-LTCPVAMTAG-VALVLERFDHGSDGSLSEFFDRLTAREYDDLLQGAMF-------- 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC- 255
            LTE++GG+D+ A  +  ++  DG + L+G KWF S+  S A + LA+     +G  G  
Sbjct: 179 -LTERQGGSDVGATETVAERTDDG-WELTGEKWFCSNVDSGAILTLARTPDAPDGTEGLS 236

Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP    +G  +G   +RLK+K+G  S  T E+EF      L+G+L      + +M  
Sbjct: 237 LFLVPGTTSNGERDGAFVRRLKDKLGTVSVPTGEVEFRGAEAHLVGELESGFRYMSEMLN 296

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  + +A  S   +  +L E+   A  R   G  +   P+M+R + ++A+   AATA +F
Sbjct: 297 LERIANAFASCGLIGRALLESKVRAANREAFGSTIDRYPLMRRDLVEMAVAHEAATAFTF 356

Query: 375 RLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               +FD    R +E A+A  R++ PI K    +MA  V + AME  GG+GY+ +    R
Sbjct: 357 DAGRAFDR-YHRGDEDAFALMRLLVPIAKSRTGRMAVDVASYAMEIHGGNGYVNDFVTNR 415

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
             R++    I  G+ N + LDVL  L +
Sbjct: 416 LLRDAQVLPIWEGTSNILSLDVLRALAR 443


>gi|288556197|ref|YP_003428132.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288547357|gb|ADC51240.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 556

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 233/509 (45%), Gaps = 44/509 (8%)

Query: 34  MNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y +D +L  ++     +   +   K+LE  GE   +   +          P+L  Y 
Sbjct: 1   MNFYQNDPVLKKILKTHLDSRMFNWADKQLESFGEMCGTVIDERAKHTDREGQPKLVKYN 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  +  +   +R +   G+   +  +    +  K  +    A+ YL++Q E 
Sbjct: 61  QFGEDISHIWVNEGYKQTVRETYQTGIVGYV-HKKIPELNTKGNYMYSYAQGYLLSQSEP 119

Query: 149 GHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G    ++ S+ +A ++       V + + P + S     T +  + + +      LTE++
Sbjct: 120 GFYCPVTLSMATALLLEKYANEDVKERFLPHVLS-----TGETELYEGATF----LTERQ 170

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVP 259
           GG+D+ A      K  D  Y +SG K+F S+  +    ++LA+ +G       +  F VP
Sbjct: 171 GGSDVGANEVAAVKNGDH-YLISGEKYFASNAGVCGVAMVLARGDGSSSGTKGLSLFAVP 229

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             LE G  NG+  +RLK+K+G R+  + E+EF+N   +L+GD +     + +   L  + 
Sbjct: 230 WRLEGGELNGISIRRLKDKLGVRAVPSAEVEFTNAKAYLVGDESKGIYYMMEALNLSRIC 289

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+ S+  MR +  EA+ YA +R      LID P+++ ++  + +     T   F L   
Sbjct: 290 NAVASIGIMRRAYQEALRYAFKREAFKKQLIDYPMVQESLLALCVKHEIETVAIFDLIKE 349

Query: 380 FD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +D       + +   E+AAY R++  I K    + A     EA+E +GG+GYIE+    +
Sbjct: 350 YDLLMNDDQKDQKDHEQAAYVRLLIAILKKETAEQAIHFSHEAIELLGGNGYIEDFVTPK 409

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL-----------FSTLEQDLGSSGK 481
             R++   ++  G+ N + L++L L++K T++ +Q                EQ+     K
Sbjct: 410 LLRDAQVLTVWEGTANILGLELLRLMKK-THVHKQFSKRIKAFVESDLKQFEQEKEILSK 468

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIAL 510
           ++  + R +  + + D+    +  +KIA+
Sbjct: 469 ELHALNRMTTYIERADEETQTYYAKKIAV 497


>gi|126324965|ref|XP_001380303.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 781

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 209/474 (44%), Gaps = 38/474 (8%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIA-NFPSVV----HKELELLGEYVLSCTAQELARMA 77
           F   QP L    N Y  D+LL   +  + P  +    +++L+  G  V S     L +  
Sbjct: 195 FFQGQPSL---GNQYLEDALLRGYLKRHLPPKIFAEANQDLQKFGARV-SGEILSLGQEC 250

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P L  +    ++ D +   PAW  L R S  +GL    ++R +    R      +A
Sbjct: 251 EAMPPTLQNFDARVKQVDLILTCPAWKKLKRISAEEGLIAIAYERKYSNWSRV----YQA 306

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP--KIFSREYDPTNKAPMQKTS 195
           A+L++ +   +G  + P   +     ++    V K   P  + FS     T++ P  K  
Sbjct: 307 AKLFMFSS-SSGMFICPLAMTDGATKVL---EVMKSSGPPGEAFSHL---TSRDP--KLF 357

Query: 196 VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EG 251
              G  +TE +GG+D+A  T     K  DG Y L G KWF S+  +D  + LA++   +G
Sbjct: 358 WTSGQWMTEHKGGSDVAHGTETVACKQVDGSYKLFGFKWFTSATDADMTMALARIMDAQG 417

Query: 252 RV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            V         F +    E G  NGL  QRLK K+G     T EL        L+  +  
Sbjct: 418 SVTKGTHGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHLVSQVGR 477

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  + +A + +
Sbjct: 478 GVATIANMLNVTRIYNSIGAVGSMRRIVFMARDYATQRFVFGKFIKDHPLHTQTLARMEV 537

Query: 365 DIAAATALSFRLAN--SFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            +     L   L      +E   + ++++   R++A + K +  K A A+++E +EC GG
Sbjct: 538 QVRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVSEGLECFGG 597

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   QD
Sbjct: 598 QGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQD 651


>gi|290992490|ref|XP_002678867.1| predicted protein [Naegleria gruberi]
 gi|284092481|gb|EFC46123.1| predicted protein [Naegleria gruberi]
          Length = 594

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 193/427 (45%), Gaps = 44/427 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           + K+L   G+ V S T  + + +A  N P+L  Y     R D++E H +W  L   S  +
Sbjct: 49  IMKDLTAFGDKV-SSTIWKWSDLAERNEPKLIHYDAWHNRVDRIEMHSSWKELYDTSARE 107

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL    ++R           + R  AR+Y  A+L   +L  PS       A+ T P    
Sbjct: 108 GLIALGYERD----------RFRQFARVYQFAKL---YLYDPSC------AVQTCPLSMG 148

Query: 173 DWAPKIFSREYDP---------TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           D A K+   + +          T++ P Q  +      +TEK GG+D++   +   ++ D
Sbjct: 149 DGASKLLETKREQLMIECRQHLTSRDPEQFWTS--NQWMTEKSGGSDVSGCETIATQVKD 206

Query: 224 GIYCLSGHKWFLSSPMSDAFIM-------LAQVEGRVGCFLVPRLLEDGSP-NGLCYQRL 275
             Y L+G KWF SS  + A ++         +V+ +V  FL+    E G   NGL + + 
Sbjct: 207 FDYLLNGFKWFGSSDSAMALLLAKIKDEKTGKVDDKVSLFLLKTKDETGQNWNGLLFHKF 266

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           KNK+G ++  T E+E  N    L+         +  M  +  + ++I +V+ MR ++  A
Sbjct: 267 KNKLGTKAMPTSEIELKNAKATLISPRGQGVKFIATMINVTRIYNSICAVAKMRRAVNIA 326

Query: 336 IHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAA 391
             +A +R V+ G IL    +  R ++ +  +   +        R+    +   +   E  
Sbjct: 327 QDFASKRIVNKGQILAHNTLHLRWLSKMVAETTGSLHFVMDCVRILGKEECGIANQNERQ 386

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             R+  PI K +  K +  V++E +E +GG GY E+  + R  R++   SI  G+ N + 
Sbjct: 387 ILRLCIPIIKLYTGKKSLQVVSEGLEMLGGVGYTEDSGMPRLLRDAQVLSIWEGTTNILS 446

Query: 452 LDVLNLL 458
           LDVL +L
Sbjct: 447 LDVLRVL 453


>gi|311106641|ref|YP_003979494.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761330|gb|ADP16779.1| acyl-CoA dehydrogenase, middle domain protein 8 [Achromobacter
           xylosoxidans A8]
          Length = 597

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 213/477 (44%), Gaps = 60/477 (12%)

Query: 29  PLFIGMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQ 83
           P   G + Y+ D  L  L+  + P   H +L    + +G+ +       LA +A+   P 
Sbjct: 27  PDCAGQDFYALDRGLQDLLRLYVPEAAHAKLLPQFQRMGQ-LAGGRLNALATVADKFPPV 85

Query: 84  LHAYGPGGERWDKVEFHPAW-------------HALLRRSIHDGLHCSIWDRSFEPVVRK 130
           LH     GE  D +E+HPA+             HA+  R+    L C   D    PV + 
Sbjct: 86  LHPRTRWGEDEDWIEYHPAYQEMEHIAFADFQFHAMSHRA--GVLGC---DAPLPPVAKY 140

Query: 131 QAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A  YL  Q E G +  +S S TS  ++    +P + +   P++ S + D   K
Sbjct: 141 -------ALQYLFVQAEFGQMCPISVSDTSIHLIRKFGSPALQEKLLPRMLSSDPDTLWK 193

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                        +TEK GG+D+ A+ +  +++ DG + L G KWF S   +D  ++LA+
Sbjct: 194 GTQ---------FMTEKAGGSDVGALETVARQV-DGTWRLHGEKWFCSHTDADVALLLAR 243

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            EG       +  F +PR LEDGS N     RLK+K+G RS A+ E+       +L+G +
Sbjct: 244 PEGAPAGTRGLALFAMPRRLEDGSRNAYRIVRLKDKLGTRSMASGEIRLEGAQAYLVGQV 303

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI--- 359
           +     + +   L  L   + + + MR  L EA+  AR RH  G  ++  P+++R +   
Sbjct: 304 DQGLKHMMEQVNLSRLSHGVRAAAMMRRCLNEAMLAARHRHAFGRDVMAYPLLRRQLLKL 363

Query: 360 ---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
               + AL +  ATA   R A   D A      A   R++ P+ K   C+   +V   AM
Sbjct: 364 LTPTEAALSMVMATADIMRRAQEGDTAA-----APVLRLLTPLLKLRTCRDNVSVATGAM 418

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           E  GG+GYIE+   AR  R++    +  G+ N   LD +    +     E L + LE
Sbjct: 419 EVRGGNGYIEDFINARLVRDAHIGVLWEGTSNINALDAIQRAVRKERAHEALSALLE 475


>gi|262195083|ref|YP_003266292.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262078430|gb|ACY14399.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 557

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 208/479 (43%), Gaps = 53/479 (11%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
             QPP     N Y  D  L       L A   + V  EL  LGE  LS       ++A+ 
Sbjct: 4   FQQPPAL--GNQYDDDFFLQDYLARTLPAEVLAAVEDELRELGE--LSGGHFYRMQLADA 59

Query: 80  NTPQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
               +H  +   G+R D++E  P W      +   GL  + +D          +   R A
Sbjct: 60  RNEPVHVPWDAWGQRVDRIEVSPLWREAQALAAERGLVAAAYD----------SPHGRFA 109

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP----------TNK 188
           R++   Q    ++++PS+       + + P    D A +      +           T++
Sbjct: 110 RVH---QFALNYVIAPSLD------VYSCPLAMTDGAARTLLSSGNQALIEHAVTRLTSR 160

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P Q  +   G  +TE+ GG+D+    ++ ++  D  + L G KWF S+  S   + L +
Sbjct: 161 DPAQAWTS--GQWMTERTGGSDVGLSETEARRDGD-TWRLWGTKWFTSATTSQMALTLGR 217

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD- 301
            +G       +  F V    +DG    +   RLK+K+G R   T EL  + T   L+ + 
Sbjct: 218 PDGNGPGGRGLALFYVELRDDDGRLRNIEVNRLKDKLGTRKVPTAELTLAGTPATLVTEE 277

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +     +  M  +    +AI++ S MR  LA A  YA+RR   G  L ++P+    +AD
Sbjct: 278 AHNGVRSITPMLNITRTWNAIIATSLMRRGLALAKDYAQRRRAFGARLAEKPLHLDTLAD 337

Query: 362 IALDIAAATALSFRLA---NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +  + A A  L+FR A    S +  ++   +AA AR++ PI K    K A  V +EA+E 
Sbjct: 338 MQAETAGAVLLAFRAAELLGSLESGEATDSDAALARVLTPIAKLSTGKQAVTVTSEALES 397

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
            GG+GY+E+  + R   ++    I  G+ N + LD L  L +  + F  L    E+ LG
Sbjct: 398 FGGAGYVEDTGLPRLLADAQVLPIWEGTTNVLSLDTLRALGQ-EDGFRALQGECERLLG 455


>gi|268317756|ref|YP_003291475.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335290|gb|ACY49087.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 558

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 209/472 (44%), Gaps = 32/472 (6%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQEL--ARMANYNT 81
           + +PP     N Y +DSLL   +A   P+ V +E+E   + + +     L   ++ +  +
Sbjct: 3   VQEPPRLD--NTYEADSLLRGYLARALPAEVLREIEPELQELGTLAGGPLYHLQLEDRTS 60

Query: 82  PQLH-AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D++     W      ++  GL  + +++ +    R   H+   A++
Sbjct: 61  EPVHIPWSAWGERIDEIRLTRVWQEAEPLAVRFGLVATAYEQRYGAFSR--IHQF--AKV 116

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL A     +    ++T  +   L+ +   R+ +   P + SR     N A    T    
Sbjct: 117 YLFAPSTDIYACPLAMTDGAARTLLDSGNRRLIERALPHLTSR-----NPA----TFWTS 167

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           G  +TE  GG+D+ +  +  +   DG + L G KWF+S+  S   ++LA+ EG       
Sbjct: 168 GQWMTELTGGSDVGSSQTVARPEPDGTWHLYGRKWFVSAITSQMALILARPEGNPPGGRG 227

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F      E G P G    RLK+K+G R   T E+         +  L   T  +  M
Sbjct: 228 LALFYAELRDERGRPRGFQILRLKDKLGTRKLPTAEVLLEGLPAEPVAGLTHGTRTIAPM 287

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +    +AI + + MR  L  A  YARRR   G  L + P+    +A +  + AAA  L
Sbjct: 288 LNVTRTWNAITAAALMRRGLLLARDYARRRVAFGRPLAEHPLHLDTLAGLQAETAAAFHL 347

Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +F    L    +  ++  +E A  R++ P+ K    + A AV++E +E  GG+GY+E+  
Sbjct: 348 AFCVAELMGRVETDEASDDERALLRLLTPVAKLTTARQAVAVLSEVLEAFGGAGYVEDTG 407

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSS 479
           +    R++    I  G+ N + LDVL  LE   G     + F    QD+  S
Sbjct: 408 LPVLLRDAQVLPIWEGTTNVLALDVLRALEDIGGLQPLHKAFDVWLQDVPES 459


>gi|254495593|ref|ZP_05108515.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254355163|gb|EET13776.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 529

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 24/417 (5%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  EL  LG+ V+    Q L + A  + P+   Y P G+R D++E   AW+ L + S  +
Sbjct: 5   IEPELRHLGQRVIEDIHQ-LGQEAEASPPKHVPYDPWGKRIDQIEVPAAWNELDKISAEE 63

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
            L    ++R    + R   H+    +LYL     A +    ++T  +  AL     ++ D
Sbjct: 64  KLIAIGYERRHGALSR--IHQF--VKLYLFHPSSAIYTCPLAMTDGAARAL----ELYAD 115

Query: 174 WAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            A K   R +   T+  P Q  +   G  +TE+ GG+D++  T+   K     + LSG K
Sbjct: 116 EALK--KRAFSHLTSADPTQFWTS--GQWMTERTGGSDVSG-TATIAKPDGAQFRLSGVK 170

Query: 233 WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           WF S+  S   + LA +EG       +  F +     +G+ NG+   RLK+K+G R+  T
Sbjct: 171 WFTSATTSQIAMTLASIEGAPAGSKGLSLFYLELRDPNGALNGIRINRLKDKLGTRALPT 230

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            EL   N    L+G        +  +  +  + +A  +V  MR ++A A  YA +R   G
Sbjct: 231 AELTLENASATLVGSAGDGVKKISSLFNITRIYNACCAVGYMRRAIALARDYANKRVAFG 290

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSF--DEAKSRSE-EAAYARIMAPITKYW 403
             L    +    ++++ ++  AA  L F        DE    +E E A  R++ P+ K +
Sbjct: 291 RPLSQHGLHLETLSNMQVEFTAAFHLVFHAVELLGKDELGEATESERAVLRLLTPLAKLY 350

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             K A A+++EA+E  GG+GYIE+  + +  R +   SI  G+ N + LD L  + +
Sbjct: 351 TAKQAIALVSEALEAFGGAGYIEDTGLPQLLRNAQVLSIWEGTTNILSLDALRAIHR 407


>gi|156744093|ref|YP_001434222.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156235421|gb|ABU60204.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 573

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 51/470 (10%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTA 70
           M   HQPS +L            N Y+ D +L + +    P  V  ++E     +     
Sbjct: 15  MELFHQPSPTLG-----------NQYTDDRVLRSFLQRTLPRDVLAQVEPDMMAMGELAG 63

Query: 71  QELARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            EL R+      N P L  +   GER D +E  P W    R +   GL    ++R++  +
Sbjct: 64  GELYRLHLADRLNEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGAL 123

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT- 186
            R             + Q    +L  PS        + T P    D A +   +  D   
Sbjct: 124 SR-------------VVQFALVYLFHPSTD------VYTCPLAMSDGAARTLVQAGDAAL 164

Query: 187 -NKAPMQKTS------VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
            ++A  + TS         G  +TE  GG+D++   +  +   DG++ L G KWF S+  
Sbjct: 165 IDRALPRLTSRDPDRCWTSGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATT 224

Query: 240 SDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               + LA+ EG       +  F +    E+G   G+   RLK+K+G R   T EL    
Sbjct: 225 GQMALALARPEGNPSGSRGLALFYIELRDEEGRLQGIRVNRLKDKLGTRKVPTAELSLEG 284

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           T   L+G LN     +  M  +  + +++ +VS MR  +A A  YARRR      L  QP
Sbjct: 285 TPARLVGALNGGVRAIVPMLQVTRIWNSVSAVSFMRRGIALARDYARRRVAFEAPLNRQP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAY-ARIMAPITKYWCCKMAPA 410
           +    +A +  +   A  LSF  A     +EA +  +   +  R++  ITK    + A  
Sbjct: 345 LHTETLATLQAEFEGAFHLSFLTAGLLGAEEAGTADKRQQHLLRVLTSITKLTTGRQAVD 404

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V++E +E  GG+GY+E+  +    R++    I  G+ N + LD L  L +
Sbjct: 405 VMSEVIEAFGGAGYVEDTGLPALLRDAHVLPIWEGTTNVLALDTLRALAQ 454


>gi|330805830|ref|XP_003290880.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum]
 gi|325078965|gb|EGC32589.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum]
          Length = 625

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 216/485 (44%), Gaps = 50/485 (10%)

Query: 27  QPPLFIGMNAYSSDSLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
           Q PL +G        LL AL    P    + +  +L   G+ V++    EL R +  N P
Sbjct: 22  QSPL-LGNQFLEDTELLKALKRVLPLEVLNEIKPDLTQFGDRVVN-DILELGRASENNPP 79

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L      G R DK+    +W+ L      +GL    ++R ++   R   +     ++YL
Sbjct: 80  KLLQLDAWGRRIDKIVVDESWNKLKDIGCKEGLVSIGYERKYKEFSRIYQY----IKIYL 135

Query: 143 MAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            A   A      S+T   A ++ L  T  + KD      +R  DP+            G 
Sbjct: 136 FACSSAVFDCPLSMTDGGARLLELHGTDSMKKDELQHFITR--DPSQ-------FWTSGQ 186

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-----------IYCLSGHKWFLSSPMSDAFIMLAQ- 248
            +TEK GG+D++   +  Q++++             + +SG+K+F S+  SD+ ++LA+ 
Sbjct: 187 WMTEKTGGSDVSGSETIAQELTNPSEYPKLLSTPPTHKVSGYKYFTSATTSDSSMILARD 246

Query: 249 --------VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                   V G  G   +L+     +G  + +   +LKNK G ++  T ELE   T    
Sbjct: 247 VDKDGNGGVSGSRGLSVYLIKLRTPNGELDRIRVHKLKNKFGTKAVPTAELELMGTPAVR 306

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G        +  +  +  + + I SVS MR  +A    +A RR V G +L D  +    
Sbjct: 307 IGPKGRGVPVIASILNITRIHNVIHSVSTMRRCIAIGRDFAHRRTVFGKLLKDNLLYLST 366

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A++ L+  A   L F L  S    KS      E  +  RI+ P++K +  K +  V +E
Sbjct: 367 LAEMELEFRAG--LHFLLDVSLLLGKSECCATPETDSLLRILTPLSKLYTAKQSIWVSSE 424

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            +E +GG+GY+E+  + R +R++   SI  G+ N + +DV   L K T   E  F +++ 
Sbjct: 425 GIELLGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDVWRSL-KNTKTIECFFKSIQD 483

Query: 475 DLGSS 479
            + ++
Sbjct: 484 RVSNT 488


>gi|76802108|ref|YP_327116.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160]
 gi|76557973|emb|CAI49558.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160]
          Length = 603

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 236/536 (44%), Gaps = 73/536 (13%)

Query: 59  ELLGEY--VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS------ 110
           E+L E+  VL     + A   +    +L ++   GER ++VE+HP      R +      
Sbjct: 44  EVLSEFGDVLGHRMADTADRIDKEGHELCSFDKFGERRNEVEYHPLIEEQERITYEEFGV 103

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            HD  H        EPV       ++     L++ ++AG     S+T+ + + L      
Sbjct: 104 THDAFHAPPG--RDEPVGLSHTLMMQT----LLSYVDAGFCCPVSMTTGAAIVLDKFDDG 157

Query: 171 H-KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS------- 222
               +   + +R+ D         T +   + LTE++GG+D+ A  ++ + +        
Sbjct: 158 ELSSYFEGLTARDLD---------THIEGAMFLTEEQGGSDVGANETRAEPVEADDSVAA 208

Query: 223 -----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLC 271
                D IY L G KWF S+  ++  + LA+  G       +  FLVPR   DG  N   
Sbjct: 209 ADIDRDRIYRLHGEKWFCSNIDAEGALALARTPGAPEGVDGLSLFLVPRTKPDGEVNEAH 268

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++RLK+K+G  S  T E++F     +L+G+       + +M     L +A  ++  M   
Sbjct: 269 FRRLKDKLGTISVPTGEIQFEGAEAYLVGEEGRGFKYMSEMMNFERLTNATGALGVMGRG 328

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA- 390
           L EA   A +R   G  + + P+++R + D+++D  AA A SF  A + DE + + +++ 
Sbjct: 329 LLEAKVRAAQREAFGDAIDEYPLLRRDLVDMSVDYEAAAAFSFEAARTLDERERQGDDSD 388

Query: 391 AYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           AY   R+  P+ KY   +M+  + + AME +GG+GY+ E +  R  R++    I  G  N
Sbjct: 389 AYQLMRLFIPVAKYKTARMSVDMSSYAMEILGGNGYVREHTTERLLRDAQVLPIWEGPSN 448

Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDL------------GSSGKKVITILRDSISLCKE 496
            + LDVL    +  +  E L   L+  L            G+  ++ + +     SL  E
Sbjct: 449 ILALDVLRAFNR-EDAHEALVPYLQAKLDAVEHPALEPLAGTVEERFVELQNALASLATE 507

Query: 497 DKGLARFLTEKIA-----LASSAAALYRAGMNDIAD----------VFLENRFLDN 537
           D   A++  +++A     + S A  L  A     AD           F+E RF D+
Sbjct: 508 DGDYAQYHAKRLADLVFDVVSGALLLEEAQEQIDADGNGRKALVATRFIETRFEDD 563


>gi|115712879|ref|XP_787606.2| PREDICTED: similar to LOC446287 protein, partial
           [Strongylocentrotus purpuratus]
 gi|115955109|ref|XP_001185668.1| PREDICTED: similar to LOC446287 protein, partial
           [Strongylocentrotus purpuratus]
          Length = 436

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 14/271 (5%)

Query: 199 GLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------- 249
           G  +TE+RGG+D+A  T       +DG + L G+KWF S+  SD  + LA++        
Sbjct: 27  GQWMTERRGGSDVAGGTETLAYPQNDGSFHLHGYKWFSSASDSDMTVALARIVDDDGQYK 86

Query: 250 EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           EG  G   F +     +G  NG+  Q+LKNK+G R   T EL    T   L+ +      
Sbjct: 87  EGTRGLSLFYLETRTPEGKLNGIEIQQLKNKLGTRQLPTAELLLDGTKAHLVSEPGYGVA 146

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  +    +A M+V+ MR  +  A  Y+ +R   G +++D P+  + ++ + L+  
Sbjct: 147 SISPMLTITRFHNATMAVAAMRRMVHYARDYSFQRRAFGKLIVDWPLHVQTLSRMELETR 206

Query: 368 AATALSFRLANSF--DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            A AL    A+    DEAK  SE+     R++ P+ K +  K A +V +E +E IGG GY
Sbjct: 207 GAMALLLECAHLLGKDEAKEGSEDDLNLLRLLIPVLKLYTGKQAVSVASEGLESIGGQGY 266

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           IE+       R++   SI  G+ N + LD+L
Sbjct: 267 IEDTGFPGILRDAQVLSIWEGTTNILSLDIL 297


>gi|108757033|ref|YP_632158.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460913|gb|ABF86098.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 553

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 206/480 (42%), Gaps = 55/480 (11%)

Query: 27  QPPLFIGMNAYSSDSLLVALIA-NFPSVVHKEL--------ELLGEYVLSCTAQELARMA 77
           Q P  +G N Y  D+LL + +A   P  + + L        EL G+Y      ++     
Sbjct: 5   QDPPRLG-NQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRD----- 58

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
             N P+L  +   G+R D +E  P W      +   GL  + +++       K A   R 
Sbjct: 59  RLNEPELTQWDAWGQRVDHIEVSPLWKEAESLAARRGLVATAYEQ-------KNAELSRV 111

Query: 138 ARLYLMAQLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            +  L   ++A        L      + S++ L  T  + +   P + SR  DP      
Sbjct: 112 HQFILNYLVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRA-LPHLTSR--DPA----- 163

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
             T+   G  +TE+ GG+D+    +  ++  +G + LSG KWF S+  +   + LA+ EG
Sbjct: 164 --TAWTSGQWMTERTGGSDVGLTQTVARQTPEG-WRLSGTKWFTSATTAQMALTLARPEG 220

Query: 252 R------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +  F V      G  NG+   RLK+K+G R   T EL         +  L   
Sbjct: 221 NGPGGKGLALFYVETRDAAGRLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGL--- 277

Query: 306 TGPVEDMKILIYLD---SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           T  + +M  ++ +    +A+ S   MR +LA A  YA+RR   G  L D+P+    +A +
Sbjct: 278 TDGIRNMAWMLNVTRTWNAVGSAWAMRRALALARDYAQRRVQFGAKLADKPLHMDTLAGL 337

Query: 363 ALDIAAATALSFRLANSFD--EAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  A   L+FR        EAK+ +E E    R++ P+ K    +    V +E  E  
Sbjct: 338 EAEFQAGFLLAFRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAF 397

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG+GY+E+  I R   ++   SI  G+ N + LD L  L K   L E  F  +E  LG +
Sbjct: 398 GGAGYVEDTGIPRIQADAQVLSIWEGTTNVLSLDTLRALAKEGAL-EAFFHEVEGRLGQT 456


>gi|226311186|ref|YP_002771080.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226094134|dbj|BAH42576.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 603

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 232/494 (46%), Gaps = 37/494 (7%)

Query: 28  PPLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTP 82
           P +  G N + +D  L  L+  + P+ +H    ++L  LG  V     +  A       P
Sbjct: 20  PRMPQGENFFKADPNLNYLLERYLPASMHEWAKQQLSWLGAQVAGPIDERAAYTDREGKP 79

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  Y   GE   ++  +  +   +      G+   ++ +    + RK  +       YL
Sbjct: 80  RLRKYNRLGEDISEIITNEGYKETVAEVYGAGIVSYLY-QDIPELGRKAPYSYSFFMGYL 138

Query: 143 MAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG- 199
           ++Q E G    ++ S+++A ++    +    + +   + SR+          +T +  G 
Sbjct: 139 VSQSEPGFYCPVTLSMSAAYLLDRYGSEEQKEQYLTGLTSRD----------RTRLYEGA 188

Query: 200 LGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
             LTE++GG+D+ A  +  + ++   G+Y L+G K+F S+  +    +LA+++       
Sbjct: 189 TWLTERQGGSDVGANLTVAEPVAGRPGVYRLTGEKFFASNAGAFVATVLARIDEEKPGTK 248

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +G FLVP +  D   N +  +RLK K+G  +  + E+  +   G+L+G+       + +
Sbjct: 249 GLGLFLVPWVKPDNERNHIQVRRLKEKLGVNAVPSAEILLNGAEGYLIGEPQNGFKYMAE 308

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  + +AI S+  MR +  EA +YA +R   G  +   P++K  +  + LD   +T 
Sbjct: 309 ALNLSRICNAIASIGIMRRAFYEARNYAEQRRAFGKPIDQYPMVKEMLVSLLLDTEVSTG 368

Query: 372 LSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             F +   +D  +S S   E+ A AR++ P+ KY   + A      A+E  GG+GYIEE 
Sbjct: 369 AVFDMIAVYDRLQSHSVSKEDNALARLLIPLLKYRTGEEAVKSTHTAIEIHGGNGYIEEY 428

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT--- 485
              R  R++   ++  G+ N + LD+L +++K  +   ++FS + ++  +  K V +   
Sbjct: 429 VTPRLLRDAQVLTVWEGTSNILALDILRVMQKENS--HEVFSRMLRERIAGWKHVFSQPY 486

Query: 486 --ILRDSISLCKED 497
             ++R  +++ +E+
Sbjct: 487 AELIRTELAILEEN 500


>gi|115380414|ref|ZP_01467405.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Stigmatella aurantiaca DW4/3-1]
 gi|310821695|ref|YP_003954053.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115362575|gb|EAU61819.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Stigmatella aurantiaca DW4/3-1]
 gi|309394767|gb|ADO72226.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 552

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 195/460 (42%), Gaps = 59/460 (12%)

Query: 35  NAYSSDSLLVALIA-NFPSVVHKEL--------ELLGEYVLSCTAQELARMANYNTPQLH 85
           N Y  DSLL   +A   P  + + L        EL G+Y  +   ++       N P+L 
Sbjct: 12  NQYDDDSLLQGYLARKLPEELRRSLTDTFRELGELSGQYFYAFQLRD-----RLNEPELT 66

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+++  P W      +   GL                A++ ++A L  + Q
Sbjct: 67  QWDAWGRRVDRIDVTPLWREAEVLTARHGLVAV-------------AYEQKSAELSRIHQ 113

Query: 146 LEAGHLMSPSV------------TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
               +++ PS+             + ++++L  T  + +   P + SR  DP        
Sbjct: 114 FALNYVIQPSLDVYSCPLAMTDGAARTLLSLGNTALIDRA-LPHLTSR--DPAE------ 164

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
                G  +TE+ GG+D+    +  ++  +G + L G KWF S+  +   + LA+ EG  
Sbjct: 165 -FWTSGQWMTERTGGSDVGLTQTVARQTPEG-WRLYGTKWFTSATTAQMALTLARPEGNG 222

Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +  F V     DG  NG+   RLK+K+G R   T EL         +  L     
Sbjct: 223 PGGKGLALFYVETRQPDGFLNGILINRLKDKLGTRKVPTAELTLDGALAVPVAGLTDGIR 282

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  +    +A+ SV  MR ++A A  YA RR   G  L ++P+    +A +  +  
Sbjct: 283 NMSSMLNVTRTWNAVASVWMMRRAMALARDYASRRVQFGAKLSEKPLHVDTLAGMEAEFE 342

Query: 368 AATALSFRLANSFD--EAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            A  L+FR A      EAK  +E+     R++ P+ K    K   A+ +EA+E  GG+GY
Sbjct: 343 GAFLLAFRAAELLGRMEAKVATEQDLQLQRLVTPLAKLTTGKQTVALTSEALESFGGAGY 402

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +E+  + R   ++   SI  G+ N + LD L  L K   L
Sbjct: 403 VEDTGLPRMLADAQVLSIWEGTTNVLSLDALRALAKEGTL 442


>gi|170089285|ref|XP_001875865.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649125|gb|EDR13367.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 594

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 231/506 (45%), Gaps = 57/506 (11%)

Query: 27  QPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELE-----LLGEYVLSCTAQELARMANYN 80
           QP  F   N Y+SD +L  L+    P  V +++E     L GE + S   + L      +
Sbjct: 8   QPVPFQEENTYTSDPVLPDLLKRTLPPSVFQQIEPDLIRLGGEIITSI--RSLGDGNKIS 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  Y   G R D ++    W  L   +  +G+    ++R F     K+  ++     
Sbjct: 66  PPILTQYDQWGRRVDNLQTSEGWRDLKAVAQKEGIPGIFYERKF-----KEHSRVYGFAK 120

Query: 141 YLMAQLEAGHLMSP-SVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            +M   +   +  P S+T  SA ++ L+ TP + K   P++ SR  DP+        +  
Sbjct: 121 MMMMVGDTHEVFCPLSMTDGSARVIELIGTPEMKKKILPRLISR--DPS-------FAFT 171

Query: 198 IGLGLTEKRGGTDIAAITSQ----GQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV--- 249
            G  +TE+ GG+D++   +     G+  S G  Y L+G KWF S+  S+  + LA+    
Sbjct: 172 SGQWMTERPGGSDVSRTETTAVDTGKSHSFGPKYSLNGFKWFSSATDSEVSVALARTGTA 231

Query: 250 -EGRVGC----------FLVPRLLEDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            +G  G            L  R     SP  N +   RLKNKIG  +  T EL  ++T  
Sbjct: 232 EDGSRGLSLFLVPLRLPLLRERSDPPSSPVSNNIFVHRLKNKIGTHALPTAELTLTSTEA 291

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILIDQPV 354
           +L+G+ N     +  +  +  L SA  SV  +R  L+ A  YA+ R + GG  +L D P+
Sbjct: 292 YLMGEPNQGIKNITPVLNITRLWSAATSVGNLRKCLSIATAYAKVRSIKGGSQLLQDTPI 351

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAV 411
               +A I L   A T L+F + +   +++   + ++E    R++ P  K +  + A A 
Sbjct: 352 HVAQLASINLLYRALTHLTFGVISLLGKSECGVATTDELRRLRMLTPAAKAFAAEKACAG 411

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLF 465
           + EAM  +GG+GY+EE  I R  R++    I  G+   + LD+         +E  T+  
Sbjct: 412 MEEAMAALGGAGYMEENGIGRSIRDALVEKIWEGTVVVLALDLARSAQDRESMESFTSWA 471

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSI 491
            ++ S+   DL    ++ + +L++++
Sbjct: 472 NRVISSAASDLQEIIQRPLDLLKNAL 497


>gi|94312720|ref|YP_585929.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93356572|gb|ABF10660.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 596

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 202/440 (45%), Gaps = 29/440 (6%)

Query: 31  FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
           F+ ++    D L + L A+  + +   LE +G+ +       LA +A+ + P LH     
Sbjct: 34  FLALDRGLQDMLRLYLPADAHAHLLPHLERMGK-LAGGRLNTLAIVADKHAPVLHVRTRW 92

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAARLYLMAQ 145
           GE  D +E+HPA+  +   +  D    ++  R       EP+     +  +    YL  Q
Sbjct: 93  GEDADWIEYHPAYQEMEHIAFGDFQFHAMSHRGGVLGWKEPLPAAAKYAFQ----YLFVQ 148

Query: 146 LEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            E G +  +S S TS  ++    +  + +   P++ S     ++   M K +      +T
Sbjct: 149 AEFGQMCPISVSDTSIHLIRKYGSAALQEKLLPRLLS-----SDPGTMWKGTQF----MT 199

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV------GCFL 257
           EK GG+D+ AI +  ++  DG + L G KWF S   +D  ++LA+ EG V        F 
Sbjct: 200 EKAGGSDVGAIETVARE-EDGEWRLYGEKWFCSHTDADIALLLARPEGAVDGTRGLALFA 258

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR L+DGS N     RLK+K+G RS A+ E+       +L+GD       + +   L  
Sbjct: 259 LPRTLDDGSRNAYRIVRLKDKLGTRSMASGEIRLDGAVAYLVGDPTQGLKQMMEQVNLSR 318

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ + + MR  L EA+  AR R   G  ++   +++R +  + +   AA ++    A
Sbjct: 319 LSHAVRAAAMMRRCLNEALVAARHRRAFGREVVGHALLRRQLLKVMVPTEAALSMVMATA 378

Query: 378 NSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    A K     A   R++ P+ K   C+    V   AME  GG+GYIE+   AR  R+
Sbjct: 379 DIMARAGKGDKTAALALRLLTPLLKLRTCRDNIEVATGAMEVRGGNGYIEDFVNARLVRD 438

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +    +  G+ N   LD + 
Sbjct: 439 AHIGVLWEGTSNINALDAIQ 458


>gi|196248430|ref|ZP_03147131.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196212155|gb|EDY06913.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 569

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 198/450 (44%), Gaps = 39/450 (8%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P L   +  Y  D L             ++LE   E+ L+   +          P+L  Y
Sbjct: 19  PNLLANLKRYLDDELY--------QYAEEKLESFYEFCLTEVDRRAVHTDREGQPRLMKY 70

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYL 142
              G    +V  +  +    +++   G+    H  I      P + KQ + I + A+ Y+
Sbjct: 71  DRFGNDISEVWVNEGYEQTAKQTYETGIVGYVHKPI------PELGKQGNYIYSYAQGYI 124

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           ++Q E G     ++T       M T  V + +A       Y P   +  +         L
Sbjct: 125 LSQAEPGFYCPVTLT-------MATAYVLEHFADHELKTRYLPHVISTGEIELYEGATFL 177

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGC 255
           TE++GG+D+ A   +     D  Y L G K+F S+       ++LA+++G       +  
Sbjct: 178 TERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSL 236

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L
Sbjct: 237 FLVPWRNEDGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNL 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +AI SV  M+ +L EA  YA RR   G  L D P+++  +AD+       T+  F 
Sbjct: 297 SRVCNAIASVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFE 356

Query: 376 LANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +   FD   +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+   
Sbjct: 357 MVALFDRVMTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVT 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++   ++  G+ N + L+VL L+ K
Sbjct: 417 PRLLRDAQVLTVWEGTANILALEVLRLMRK 446


>gi|308497222|ref|XP_003110798.1| CRE-ACDH-11 protein [Caenorhabditis remanei]
 gi|308242678|gb|EFO86630.1| CRE-ACDH-11 protein [Caenorhabditis remanei]
          Length = 640

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 214/484 (44%), Gaps = 72/484 (14%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V  +L   G+ + S   + L R A    P+L      G+R DK+     W  L +    +
Sbjct: 68  VSADLTKFGDRITS-EIEHLGRQAELEQPRLEHQDAWGKRIDKLVVCNEWQKLKQICAEE 126

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP----- 168
           G+    ++   +P VR+  H++  A+L+L +   AG +  P   +   V  +T       
Sbjct: 127 GVISIGYENDVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTVGILYSL 182

Query: 169 ------RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKI 221
                 ++  +   ++ SR  DPT       ++   G  +TEK+GG+D+A    +   +I
Sbjct: 183 NLYGKHKLATEAVDRLRSR--DPT-------SAWTSGQWMTEKKGGSDVAGGCDTYAVQI 233

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQ--------VEGRVGC--FLVPRLLEDGSPNGLC 271
            +  Y L+G+KWF S+  +D  + LA+        VEG  G   FL+    ++G+ NG+ 
Sbjct: 234 ENDTYRLNGYKWFSSAIDADVALTLARIVDSDGNAVEGSRGLSLFLLRIRDDNGNLNGIQ 293

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR-- 329
             RLKNK+G +   T EL         +G+       + +M  +  + +A+ S+  MR  
Sbjct: 294 MVRLKNKLGTKQLPTAELLLDGAIAERIGEPGRGVAGISNMLNITRIHNAVASLGYMRRF 353

Query: 330 ---------------VSLAEAIHYARRRHVSGGILIDQ---PVMKRAIADIALDIAAATA 371
                          +SLA    Y+ +R V G   +     P+    +A + ++   +  
Sbjct: 354 PALFSFLFKCSFSRIISLAR--DYSTKRVVFGQTQVKYSKWPLHTTTLAKMEVETRGSML 411

Query: 372 LSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           L F   RL    +  KS   +A   R++ P+ K +  K A  +++E +EC GG GY+E+ 
Sbjct: 412 LLFESARLLGLSEAGKSSDVDAMMLRLITPVLKLYAGKQAVPLVSEGIECFGGQGYMEDT 471

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +    R++    I  G+ N + LDVL           ++FS  E  L + GK+V  +L 
Sbjct: 472 GLPTILRDAQVTPIWEGTTNVLSLDVL-----------RVFSGKENILLAFGKRVSQLLS 520

Query: 489 DSIS 492
           ++ S
Sbjct: 521 NTKS 524


>gi|138895000|ref|YP_001125453.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266513|gb|ABO66708.1| Probable acyl-CoA dehydrogenase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 569

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 198/450 (44%), Gaps = 39/450 (8%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P L   +  Y  D L             +++E   E+ L+   +          P+L  Y
Sbjct: 19  PNLLANLKRYLDDELY--------QYAEEKIESFYEFCLTEVDRRAVHTDREGQPRLMKY 70

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYL 142
              G    +V  +  +    +++   G+    H  I      P + KQ + I + A+ Y+
Sbjct: 71  DRFGNDISEVWVNEGYEQTAKQTYETGIVGYVHKPI------PELGKQGNYIYSYAQGYI 124

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           ++Q E G     ++T       M T  V + +A       Y P   +  +         L
Sbjct: 125 LSQAEPGFYCPVTLT-------MATAYVLEHFADHELKTRYLPHVISTGEIELYEGATFL 177

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGC 255
           TE++GG+D+ A   +     D  Y L G K+F S+       ++LA+++G       +  
Sbjct: 178 TERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSL 236

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L
Sbjct: 237 FLVPWRNEDGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNL 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +AI SV  M+ +L EA  YA RR   G  L D P+++  +AD+       T+  F 
Sbjct: 297 SRVCNAIASVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFE 356

Query: 376 LANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +   FD   +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+   
Sbjct: 357 MVALFDRVMTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVT 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++   ++  G+ N + L+VL L+ K
Sbjct: 417 PRLLRDAQVLTVWEGTANILALEVLRLMRK 446


>gi|218289265|ref|ZP_03493500.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240613|gb|EED07793.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 533

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 170/338 (50%), Gaps = 23/338 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253
           +TE +GG+D+ A  +Q     DG ++ L+G K+F S + ++D  I  A+ EG       +
Sbjct: 156 MTEVQGGSDLGA--NQTTARFDGEVWRLTGDKYFASGAGLTDYAIATARPEGAPSGPKGL 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVPRL  DG+ N    +RLK+K   R+  + E+EF++T  FL+GD ++      +  
Sbjct: 214 ALFLVPRLRRDGNLN-FHVRRLKDKSATRAVPSGEVEFADTEAFLIGDPHLGIYYTLENL 272

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L +A  ++   + +L E +H  R R   G +L +  +++R + D A+  A   AL+
Sbjct: 273 TVSRLANAAGAMGIAQKALLEVMHRVRHRRSFGHVLHEHALIRRDLTDFAVRHAGGLALT 332

Query: 374 FRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           F   + FD+A       S +   AR+   + K      A  + A AME  GG G++EE +
Sbjct: 333 FHAIDLFDQAWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYA 392

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN---LFEQLFSTLEQDLGSSGKKVITI 486
           IAR +RE+    I  G  N   LD L  L K  N   + +++ + L       G+ V++ 
Sbjct: 393 IARWHREALITPIWEGPSNIQALDFLETLMKLGNVDDVIDRIAAPLACRSVPGGRVVVSR 452

Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYR 519
           +R  ++  +     E +  ++ +   +A  + AA+LYR
Sbjct: 453 VRQEVTALRALPRPEAEWQSKSVLRTVADLAQAASLYR 490


>gi|212639116|ref|YP_002315636.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560596|gb|ACJ33651.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 556

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 172/355 (48%), Gaps = 25/355 (7%)

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           A+ YL++Q+E G     ++T A+   L       +   + P + S     T +  + + +
Sbjct: 110 AQGYLLSQVEPGFYCPVTLTMATAYVLEHFADEEIKAKYLPHVIS-----TGEVELYEGA 164

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-- 252
                 LTE++GG+D+ A   +     D  Y + G K+F S+  M    ++LA+++G   
Sbjct: 165 TF----LTERQGGSDVGANEVRAVLCGDH-YEIYGEKYFASNAGMCGVALVLARIDGSEA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +L+GD       
Sbjct: 220 GTKGLSLFLVPWRNEDGTLNGIHIRRLKDKLGVRAVPSAEVVFEGAKAYLIGDAKKGFYY 279

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +   L  + +A+ S+  M+ +L EA  YA  R   G  L   P++K  +A++      
Sbjct: 280 MMEALNLSRVCNAVASIGIMKRALEEAKQYAVNRQAFGHPLTSYPMVKETLANLTARQEV 339

Query: 369 ATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            T+  F L + FD       ++  +E A+ R++  + K    + A A   EA+E  GG+G
Sbjct: 340 QTSACFELISFFDRVMRTADQASEQEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNG 399

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           YIE+    R  R++   ++  G+ N + L+VL L+ K   + E    T+ + L +
Sbjct: 400 YIEDFVTPRLLRDAQVLTVWEGTANILGLEVLRLIRK-YRVHETFIQTINEQLAA 453


>gi|281201441|gb|EFA75651.1| Probable acyl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 617

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 195/446 (43%), Gaps = 42/446 (9%)

Query: 35  NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y  DS L+  +     +N+ + +  +L   G+ V+     E  R    N P+  AY  
Sbjct: 30  NQYLEDSYLIESLKRVVPSNYLNEIEPDLVRFGDRVMG-DILEYGRACENNPPKHVAYDA 88

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R DK+     W+ L   S  +GL    ++R  +   R   +     ++YL A   A 
Sbjct: 89  WGRRIDKIVVDEGWNILKDISAVEGLVSIGYERKQKEFSRLYQY----LKIYLFACSSAV 144

Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                S+T   A ++ L     +     P   +R  DP N           G  +TEK G
Sbjct: 145 FDCPLSMTDGGARLLELYGDKELMTTAYPHYVTR--DPKN-------FWTSGQWMTEKTG 195

Query: 208 GTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIMLAQ------------VEGRV 253
           G+D+A   S  +   DG   Y +SG+K+F S+  +   ++LA+              G  
Sbjct: 196 GSDVANSESVAEPRKDGSNRYDISGYKYFTSATTAQTAMILARDREPETGGFRSGSRGLS 255

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+  R       N +   ++KNK G ++  T E+E   T G ++G+       +  + 
Sbjct: 256 AFFIKIRKDNGKDLNNMMIHKMKNKFGTKAVPTTEIELLGTEGVMIGNKGRGVPIIASIL 315

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  + + I SV+ MR  +A A  +A RR V G  L +  +    +A++ ++  A   L 
Sbjct: 316 NITRIHNVIHSVATMRRGVALARDFAHRRKVFGSSLAENQLYISTLAEMEIEYRAG--LQ 373

Query: 374 FRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           F L  S    +S   E      +  RI+ P++K +  K +  V +E +EC+GG+GY+E+ 
Sbjct: 374 FLLNVSLLLGQSECLEKNPKIDSLLRILTPLSKLYTAKQSILVSSETIECMGGTGYMEDS 433

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I R  R++   +I  G+ N + +DV
Sbjct: 434 DIPRLLRDTQVTAIWEGTTNVLSMDV 459


>gi|299537942|ref|ZP_07051228.1| protein aidB [Lysinibacillus fusiformis ZC1]
 gi|298726524|gb|EFI67113.1| protein aidB [Lysinibacillus fusiformis ZC1]
          Length = 555

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 191/442 (43%), Gaps = 26/442 (5%)

Query: 35  NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L  ++       F S   +EL   GE                  P+L  Y  
Sbjct: 13  NFFTEDDTLQKIVEMMLDKEFLSYAQRELTDFGELCAGDIDTRAKHTDRLGEPRLQRYDA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEISEVWVNDGYKKTIEETYNTGIVGYV-HKHIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                ++T       M T  +   +A +   + + P   A            LTE++GG+
Sbjct: 132 FYCPVTLT-------MATAYLLDHYADEEVKQRFLPHVCATGDTDLYEGATFLTERQGGS 184

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRL 261
           D+ A   + +K  DG  Y L G K+F S+  M    ++LA++EG       +  F VP  
Sbjct: 185 DVGANVVEARK--DGTAYRLYGEKYFASNAGMCGVAMVLARIEGAPAGSKGLTLFAVPWR 242

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            EDG+ N L  +RLK+K+G R+  + E+EF     +++G+ N     + +   L  + +A
Sbjct: 243 KEDGTTNHLRIRRLKDKLGVRAVPSGEVEFDGALAYVVGEQNKGIYYMLEALNLSRICNA 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S+  MR    EA HY   RH  G  L   P+++  +   A  +    A  F L   +D
Sbjct: 303 VASIGIMRRGFLEAKHYVTNRHAFGKPLTQYPMIQDTLGKFAAKLHVEVATVFDLIQLYD 362

Query: 382 EAKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +  S     +E    R+   I K    + A    +EA+E  GG+GYIE+    R  R++ 
Sbjct: 363 KVTSGQGTQQELIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQ 422

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             ++  G+ N + L+++ L++K
Sbjct: 423 VLTVWEGTANILALELIRLVDK 444


>gi|149183596|ref|ZP_01862016.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1]
 gi|148848686|gb|EDL62916.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1]
          Length = 560

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 25/420 (5%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           HKEL   G        +          P+L  Y   GE   ++  +  +   ++ + + G
Sbjct: 31  HKELIEFGRMCAGEIDERAVHTDREGQPRLIKYDRFGEDISEIWVNEGYKQTVKDTYNKG 90

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
           +   I  +    + RK  +    A+ YL++Q E G     ++T A+   L    +  +  
Sbjct: 91  IVGYI-HKEIPELGRKGNYLYSYAQGYLLSQSEPGFYCPVTLTMATAYLLEHYASEEIKD 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P + S     T +  + + +      LTE++GG+D+ A  ++  K  +  Y L G K
Sbjct: 150 RFLPHVLS-----TGEVELYEGATF----LTERQGGSDVGANDTKAVKSGES-YRLYGEK 199

Query: 233 WFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           +F S S M    ++LA++EG       +  F VP   EDG  NG+  +RLK+K+G R+  
Sbjct: 200 YFASNSGMCGVAMVLARMEGAKQGSKGLSLFAVPWRKEDGKLNGIKIRRLKDKLGVRAVP 259

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + E+EF     FL+G+ +     + +   L  + +AI S+  MR +  EA +YA  R   
Sbjct: 260 SAEVEFDGAEAFLVGEASRGIHYMMEALNLSRVCNAIASIGIMRRAYMEARNYAFHREAF 319

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAYARIMAPIT 400
           G  L + P++K  + ++A+     T+  F L   FD+  S       +E    R++  + 
Sbjct: 320 GKKLAEYPMVKETLTNLAVKQEIETSAVFSLVELFDKVMSHEHPVSEKEMVLNRLLIALL 379

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    + A     EA+E  GG+G+IE+  + R  R++   ++  G+ N + L++L L+ +
Sbjct: 380 KKETAEQAIHFSHEAIEMHGGNGFIEDFVLPRLLRDAQVLTVWEGTANILGLEILRLMNR 439


>gi|328875500|gb|EGG23864.1| putative acyl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 623

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 199/444 (44%), Gaps = 34/444 (7%)

Query: 35  NAYSSDSLLVALIANF-PSVVHKE----LELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y  DS L+ L+    P  V+++    L   G+ V+    Q   R +  N P+L  Y  
Sbjct: 29  NQYLEDSYLLELLPRVVPEKVYEQIKGDLTRFGDRVMGDILQ-YGRASEANPPKLVQYDA 87

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R  K+     W  L   S  +GL    ++R     V++ +   +  ++YL A   A 
Sbjct: 88  WGRRVSKIIVDEGWKILQDISAQEGLVAIGYERP----VQEYSRLYQYLKVYLFACSSAV 143

Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                S+T   A ++ L     + +       +R  DP N              +TEK G
Sbjct: 144 FDCPLSMTDGGARLLELYGDKEMMQGPFKHFTTR--DPKN--FWTSGQWVKYTEMTEKTG 199

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA----------QVEGRVG-- 254
           G+D+A   +      DG  Y +SG+K+F S+  +++ I+LA          + EG  G  
Sbjct: 200 GSDVANSETIAVGKGDGKNYDISGYKFFTSATTANSAILLARDKESAESGFRAEGSRGLS 259

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F +    + G  N +   +LKNK G ++  T ELE   T   L+G        +  +  
Sbjct: 260 AFYINIRDKQGELNNIIIHKLKNKFGTKAVPTAELELLETPSRLIGAKGRGVPVIASILN 319

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA--- 371
           +  + + I SV  MR S+A A  +A RR V    L +  +    +A++ +++ A      
Sbjct: 320 ITRIHNVIHSVGTMRRSVAIARDFAHRRMVFSSKLAENKLYLSTLAEMEIELRAGMQFFL 379

Query: 372 -LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++  L  S   AK+   E +  RI+ P++K +  K +  V +E MEC+GG+GY+E+  I
Sbjct: 380 DVTILLGKSECLAKNDQTE-SLLRILTPLSKLYTAKQSITVASEVMECLGGTGYMEDSDI 438

Query: 431 ARHYRESPANSILLGSGNAMVLDV 454
            R +R++   SI  G+ N + +DV
Sbjct: 439 PRLFRDTQVTSIWEGTTNVLSMDV 462


>gi|47226533|emb|CAG08549.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1206

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 194/464 (41%), Gaps = 89/464 (19%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E  R    + P+L  +   G R D +   PAW  +   S  +GL    ++R+F       
Sbjct: 111 EWGRECELHPPRLVHFDSWGCRVDHIVTSPAWKRMKDLSAQEGLVAIGYERAFG------ 164

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI------------- 178
                 +R+Y M++L    L SPS        L T P    D A K+             
Sbjct: 165 ----EWSRVYQMSKL---FLFSPSS------GLYTCPLAMTDGAAKVIQSTGVSSAVAEA 211

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSS 237
           +SR    T + P Q  +   G  +TE+RGG+D+A+ T +     +DG Y L G KWF S+
Sbjct: 212 YSRL---TTRQPAQFWTS--GQWMTERRGGSDVASGTETVALPQTDGSYKLHGFKWFTSA 266

Query: 238 PMSDAFIMLAQVEGRVGC-----------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             +D  + LA+V+GR G            +   R  EDG   G+  QRLK+K+G R   T
Sbjct: 267 TDADVTLTLARVQGRGGATTPGSRGLSLFYAEVRRDEDGRLKGIEVQRLKDKLGTRQMPT 326

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            EL        LL  L                          R  +  A  YA RR   G
Sbjct: 327 AEL--------LLDGLQAH-----------------------RRVVQLARDYATRRTAFG 355

Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYW 403
             L D  +  + +A + ++   A  +     RL    +   +   +    R++ P+ K +
Sbjct: 356 KRLKDHALHMQTLARMEVETRGAFLMVMDVCRLLGREESGLASQLDTNLLRLLTPLVKLY 415

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             K A AV++E +EC GG GY E+  +    R++   SI  G+ N + LDVL  +E+ + 
Sbjct: 416 TGKQAVAVVSEGLECFGGQGYCEDTGLPGLLRDAQVLSIWEGTTNILSLDVLRCVERSSG 475

Query: 464 LFEQLFSTLEQDL--GSSG----KKVITILRDSISLCKEDKGLA 501
           +    + T  + L  G+SG       +  +  ++S  K+  GLA
Sbjct: 476 MVLHAYFTHTKSLLAGASGVSSLAPAVNAVDRALSELKDFSGLA 519


>gi|56420027|ref|YP_147345.1| hypothetical protein GK1492 [Geobacillus kaustophilus HTA426]
 gi|56379869|dbj|BAD75777.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 560

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 20/344 (5%)

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           RK  +    A+ Y+++Q E G     ++T       M T  V + +A       Y P   
Sbjct: 101 RKGNYMYSYAQGYILSQAEPGFYCPVTLT-------MATAYVLEHFADDELKARYLPHVT 153

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           +  +         LTE++GG+D+ A   +     D  Y L G K+F S+       ++LA
Sbjct: 154 STGEVELYEGATFLTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLA 212

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +++G       +  FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD
Sbjct: 213 RIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAEAYVVGD 272

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +   L  + +A+ SV  M+ +L EA  YA RR   G +L D P+++  +A+
Sbjct: 273 PRKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETLAN 332

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAM 416
           +       T+  F +   FD   +   EA     A+ R++  + K    + A A   EA+
Sbjct: 333 LTARQEVETSACFDMIALFDRVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHEAI 392

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  GG+GYIE+    R  R++   ++  G+ N + L+VL L+ K
Sbjct: 393 EMHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436


>gi|313216949|emb|CBY38153.1| unnamed protein product [Oikopleura dioica]
          Length = 616

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 231/568 (40%), Gaps = 85/568 (14%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQ 83
           P  +  N Y  + LL   I       H E     L+  GE +++     L        P 
Sbjct: 51  PKPVLKNPYDGNELLQDFILRHCPPEHFERIDADLKQCGERIVN-EIDALGDECERQQPY 109

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR---SFEPVVRKQAHKIRAARL 140
           L      GER D++    AWH   R S  +GL    ++    SF  V             
Sbjct: 110 LRRTDGWGERIDEIVVSNAWHEQHRISAEEGLIAIGYENESGSFSRV------------- 156

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR---EYDPTNKAPMQKTSV- 196
                    H M+ ++ + +   L   P    D A  I      +++   +A    TS  
Sbjct: 157 ---------HQMAKNLLTGASSGLYNCPLAMTDGAAMITKSKRGDHEFLEEAYQNLTSRN 207

Query: 197 -----AIGLGLTEKRGGTDIAAITSQGQKISDGIYC--LSGHKWFLSSPMSDAFIMLAQV 249
                  G  +TEK GG+D+   T    + ++   C  LSG+KWF S+  S     LA++
Sbjct: 208 GEQFWTSGQWMTEKAGGSDVGDATHTEARWNEEKNCYELSGYKWFTSAITSQMTFTLARI 267

Query: 250 ---------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                    EG  G   F +    E+GS NG+   ++K K+G +   T EL        L
Sbjct: 268 IDDEFDAVKEGSRGLSMFYLKVRDENGSLNGIQVHKMKKKLGTKQLPTAELILDGCEAHL 327

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       +  M  +  + +A+ + S MR  +  A  YA +R      L + P     
Sbjct: 328 VGEPGRGIALISGMLTVTRIHNAVAACSFMRRMMHLARDYATKRTAFKETLSNHPAHVSV 387

Query: 359 IADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +A +  D+ AA  LS    RL    +  ++ S E    RI+ P+ K    K    V +E 
Sbjct: 388 LARMEADVRAAELLSLEVTRLFGKCENGQASSIEEDLMRILTPLAKAQTAKQGVVVCSEG 447

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFEQLFSTLEQ 474
           +EC GG GYIEE  I R  R++    I  G+   M LDVL  ++K + +  + L   +++
Sbjct: 448 LECFGGQGYIEETPIPRLLRDAQVLPIWEGTSTVMSLDVLRSIQKSSGSSLQALIGDIQK 507

Query: 475 DL-GSSGKKVITILRDSISLCKEDKGLARFL--TEKIAL----------ASSAAALYRAG 521
            L  ++  + +   R++I+   +D  + RFL   EK ++          A S A LY+A 
Sbjct: 508 KLSAANSSEKLASCRNTIATSVKD--VLRFLAQVEKESMTFQLKSARDFAFSLAKLYQAT 565

Query: 522 M-----------NDI--ADVFLENRFLD 536
           +           +DI  A++F +NR  D
Sbjct: 566 LLMDHAVFTRKESDIYAANLFSKNRLND 593


>gi|325967554|ref|YP_004243746.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
 gi|323706757|gb|ADY00244.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
          Length = 555

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 14/288 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VG 254
            TE +GG+D+ A T+   K+  G + L G K+F S   ++D  +  A+ EG       + 
Sbjct: 170 FTEIQGGSDLGANTTVA-KVDGGKWRLYGDKYFASGVGLADIALTSARPEGGKPGAKGLA 228

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VPRL   G+ N +  +RLK+K G  S  T E+EF  +  +L+GD +     + +  +
Sbjct: 229 LFAVPRLDSSGNLNFMV-RRLKDKSGTNSVPTGEVEFHGSEAYLVGDQSNGIYYIMEDLM 287

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L +AI +V   R +  EA  YA RR   G +LI+ P++ R + D+ + +  ATAL F
Sbjct: 288 VSRLANAIGAVGVARKAYLEAYEYASRRRAFGKLLIEHPLVIRDLMDMEVALEGATALVF 347

Query: 375 RLANSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + FD    +     +   YAR++  I K      A  +   AME  GG G++ E  I
Sbjct: 348 KAVDEFDRSWHDKPPYGDRYHYARLLTHIAKNVTADAAAYITRLAMELYGGIGFLSEYPI 407

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            R +RE+    I  G+ N   LD+L  + K  N    + S +E  + S
Sbjct: 408 ERWHREALITPIWEGTSNIQALDMLEAMNK-KNAHITMLSEMENTVAS 454


>gi|297530310|ref|YP_003671585.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297253562|gb|ADI27008.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 560

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 24/346 (6%)

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186
           RK  +    A+ Y+++Q E G     ++T A+   L      ++   + P + S     T
Sbjct: 101 RKGNYVYSYAQGYILSQAEPGFYCPVTLTMATAYVLEHFADEKLKATYLPHVIS-----T 155

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIM 245
            +  + + +      LTE++GG+D+ A   +     D  Y L G K+F S+       ++
Sbjct: 156 GEVELYEGATF----LTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALV 210

Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           LA+++G       +  FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +++
Sbjct: 211 LARIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVV 270

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD       + +   L  + +A+ SV  M+ +L EA  YA RR   G +L D P+++  +
Sbjct: 271 GDPAKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETL 330

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAE 414
           A++       T+  F +   FD   +   EA     A+ R++  + K    + A A   E
Sbjct: 331 ANLTARQEVETSACFDMIALFDRVMAAPHEANEAEKAWLRLLIALLKMRTAEEAIAFSHE 390

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A+E  GG+GYIE+    R  R++   ++  G+ N + L+VL L+ K
Sbjct: 391 AIEMHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436


>gi|261419729|ref|YP_003253411.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319766547|ref|YP_004132048.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376186|gb|ACX78929.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317111413|gb|ADU93905.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 560

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 24/346 (6%)

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186
           RK  +    A+ Y+++Q E G     ++T A+   L      ++   + P + S     T
Sbjct: 101 RKGNYVYSYAQGYILSQAEPGFYCPVTLTMATAYVLEHFADEKLKATYLPHVIS-----T 155

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIM 245
            +  + + +      LTE++GG+D+ A   +     D  Y L G K+F S+       ++
Sbjct: 156 GEVELYEGATF----LTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALV 210

Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           LA+++G       +  FLVP   EDG+ NG+  +RLK+K+G R+  + E+ F     +++
Sbjct: 211 LARIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVV 270

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD       + +   L  + +A+ SV  M+ +L EA  YA RR   G +L D P+++  +
Sbjct: 271 GDPAKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVREPL 330

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAE 414
           A++       T+  F +   FD   +   EA     A+ R++  + K    + A A   E
Sbjct: 331 ANLTARQEVETSACFDMIALFDRVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHE 390

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A+E  GG+GYIE+    R  R++   ++  G+ N + L+VL L+ K
Sbjct: 391 AIELHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436


>gi|295695774|ref|YP_003589012.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411376|gb|ADG05868.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 539

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 36/385 (9%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++T  +  A+      H +W  K+ + E             +     +TE +GG+D+ A 
Sbjct: 122 TITGQTAYAIHKYAPAHAEWKEKLLAGE-------------MFGATWMTENQGGSDLGAN 168

Query: 215 TSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGS 266
           T+  +   DG ++ L+G K+F S + ++D  I+ A+ EG       +  FLVPRL   G 
Sbjct: 169 TTVAR--PDGEVWRLTGDKYFASGAGLTDVAIVTARPEGAPAGPKGLALFLVPRLNRAGE 226

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N    +RLK+K   R+  + E+E  N+  +L+G          +   +  L +A+  + 
Sbjct: 227 LN-YRVRRLKDKSATRAVPSGEVELENSEAYLVGRAEQGIYYTLENLTVSRLANAVAGMG 285

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +  E +   RRRH  G  L D P+++R + D+A+ +   T L F    +F  A   
Sbjct: 286 IAKKAHLEVMERVRRRHSFGRALQDHPLVRRDLVDMAVRLVGGTVLGFHAVEAFQRAWHE 345

Query: 387 ----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S    YAR ++ + K      A  +   AME  GG G++EE ++AR +RE+    I
Sbjct: 346 RPPYSPAYHYARFLSHLAKNRTADHAAEITRLAMELFGGLGFLEEYAVARWHREALITPI 405

Query: 443 LLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQ----DLGSSGKKVITILRDSISLCK 495
             G  N   LD+L  ++K         +    LE+    + G + + +  +  D+  L  
Sbjct: 406 WEGPSNIQALDLLETVQKKNAHEGFLAEFIPILEKVGTVEAGWARETIEKVFTDAAGLNP 465

Query: 496 ED-KGLARFLTEKIALASSAAALYR 519
           E+ +  A+    ++A A+  A LYR
Sbjct: 466 EELQWYAKHWVVQMADAAQVALLYR 490


>gi|258512811|ref|YP_003186245.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479537|gb|ACV59856.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 533

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253
           +TE +GG+D+ A  +Q     DG ++ LSG K+F S + ++D  I  A+ EG       +
Sbjct: 156 MTEVQGGSDLGA--NQTTARFDGEVWRLSGDKYFASGAGLTDYAIATARPEGAPSGPKGL 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVPRL +DGS N    +RLK+K   R+  + E+EF +T  FL+GD ++      +  
Sbjct: 214 ALFLVPRLRKDGSLN-FHVRRLKDKSATRAVPSGEVEFVDTEAFLIGDKHLGIYYTLENL 272

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L +A  ++   + +L E +H  R R   G  L D  +++R + D A+  A   AL+
Sbjct: 273 TVSRLANAAGAMGIAQKALLEVMHRVRHRRSFGHALRDHALIRRDLTDFAVRHAGGLALT 332

Query: 374 FRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           F+  + FD+A       S +   AR+   + K      A  + A AME  GG G++EE +
Sbjct: 333 FQAVDLFDQAWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYA 392

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK-GT--NLFEQLFSTLEQDLGSSGKKVITI 486
           IAR +RE+    I  G  N   LD L  L K G+  ++ +++ + L       G   +  
Sbjct: 393 IARWHREALITPIWEGPSNIQALDFLETLIKLGSVDDVIDRIAAPLLGHDVPGGGDAVKR 452

Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYR 519
           +R  ++  +     E +  ++ +   +A  + AA+LYR
Sbjct: 453 VRQEVAALRALPRPEAEWQSKSVLRTVADLAQAASLYR 490


>gi|126652595|ref|ZP_01724759.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905]
 gi|126590586|gb|EAZ84703.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905]
          Length = 555

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 24/441 (5%)

Query: 35  NAYSSDSLL-----VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L     + L   F S  H+EL   GE                  P+L  Y  
Sbjct: 13  NFFTDDDTLQKVLEMMLDKEFSSYAHRELTDFGELCAGAIDVRAKHTDRQGEPRLQRYNA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                ++T       M T  +   +A +   + + P   A            LTE++GG+
Sbjct: 132 FYCPVTLT-------MATAYLLDHYAEEGVKQRFLPHVCATGDMELYEGATFLTERQGGS 184

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLL 262
           D+ A   + + + +  Y L G K+F S+  M    ++LA++EG       +  F VP   
Sbjct: 185 DVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIEGAQAGSKGLTLFAVPWRN 243

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           EDGS N L  +RLK+K+G ++  + E+EF     +++GD N     + +   L  + +A+
Sbjct: 244 EDGSANQLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDQNKGIYYMLEALNLSRICNAV 303

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+  MR    EA HY   R+  G  L   P+++  +   A  +    A  F L   +D+
Sbjct: 304 ASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLYDK 363

Query: 383 AKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             S     ++    R+   I K    + A    +EA+E  GG+GYIE+    R  R++  
Sbjct: 364 VTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQV 423

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            ++  G+ N + L+++ L++K
Sbjct: 424 LTVWEGTANILALELIRLVDK 444


>gi|295400114|ref|ZP_06810094.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110641|ref|YP_003988957.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294977893|gb|EFG53491.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215742|gb|ADP74346.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 557

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 34/455 (7%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQ----ELARMANYN----TPQLHAYGPGGERWDKV 97
           L+AN    + KEL    E  L    Q    ++ R A +      P+L  Y   G    +V
Sbjct: 11  LLANLKKYLDKELYAYAEKELEQFYQLCMTDIDRRAVHTDREGQPRLIKYDRFGNEISEV 70

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
             +  +    +++   G+   +  +    + RK  +    A+ YL++Q+E G     ++T
Sbjct: 71  WVNEGYQQTAKQTYETGIVGYV-HKPIPELGRKGNYIYSYAQGYLLSQVETGVYCPVTLT 129

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
            A+   L       + K + P + S     T +  + + +      LTE++GG+D+ A  
Sbjct: 130 MATAYLLEHFADENLKKKYLPHVIS-----TGEIELYEGATF----LTERQGGSDVGANA 180

Query: 216 SQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLLEDGSPN 268
            +     D  Y L G K+F S+        +LA+++G       +  FLVP   EDG+ N
Sbjct: 181 VRAVPCGDH-YKLFGEKYFASNAGRCGVAAVLARIDGSEPGTKGLSLFLVPWRNEDGTLN 239

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +A+ S+  M
Sbjct: 240 SIQIRRLKDKLGVRAVPSAEVVFDGAKAYVIGDPKKGFYYMMEALNLSRVCNAVGSIGIM 299

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA----- 383
           + +L EA  YA  R   G  L D P+++  +AD+       T+  F + + F+       
Sbjct: 300 KRALEEAKQYAANRTAFGHKLTDYPMVRETLADLTARQEVQTSACFEMISVFERVMTAPD 359

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  EE A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R++   ++ 
Sbjct: 360 EATEEEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNGYIEDFVTPRLLRDAQVLTVW 419

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            G+ N + L+VL L+ K   + EQ  + + + L S
Sbjct: 420 EGTANILGLEVLRLMRK-YRVHEQFIAKMAEALSS 453


>gi|311032765|ref|ZP_07710855.1| hypothetical protein Bm3-1_19884 [Bacillus sp. m3-13]
          Length = 568

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 199/427 (46%), Gaps = 38/427 (8%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
            KEL  LGE   +   +          P+L  Y   GE   +V  +  +   +  + + G
Sbjct: 31  EKELADLGESCANEIEERAVHTDREGQPRLIKYNKMGEDVSEVWVNEGYKKTVEETYNRG 90

Query: 115 L----HCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVAL--MTT 167
           +    H  I      P + +Q + + + A+ YL++Q E G     ++T A+   L     
Sbjct: 91  IVGYVHKEI------PALGRQGNYLYSYAQGYLLSQTEPGFYCPVTLTMATAYLLDHYAD 144

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIY 226
             V   + P + S     T +  + + +      LTE++GG+D+ A  +Q     S   Y
Sbjct: 145 QHVKNKFLPHVIS-----TGEVELFEGATF----LTERQGGSDVGANETQAVPHPSKHTY 195

Query: 227 CLSGHKWFLSSPMSDAFIM-LAQVEGR------VGCFLVPRLLEDGSP--NGLCYQRLKN 277
            L+G K+F S+       M LA++ G       +  F VP   EDGS   NG+  +RLK+
Sbjct: 196 LLTGEKYFASNAGQCGVAMVLARIPGAPKGTKGLSLFAVPWKKEDGSGKLNGIEIRRLKD 255

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R+  + E+ F++  G+L+G+ +     + +   L  + +AI S+  MR +  EA +
Sbjct: 256 KLGVRAVPSAEVLFNDAEGYLVGEPSKGIHYMMEALNLSRVCNAIASLGIMRRAYTEARN 315

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAA 391
           YA+ R   G  LI+ P+++ ++ D+A+ +    + SF L   FD        K   EE A
Sbjct: 316 YAKNRVTFGDRLINFPMIRESLVDMAVKLEVELSASFELVALFDRVMRNDGVKVSEEEIA 375

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             R++  + K    + A     EA+E  GG+G+IE+    R  R++   ++  G+ N + 
Sbjct: 376 LNRLLIALLKKETAEQAVHFSHEAIEMHGGNGFIEDFVTPRLLRDAQVLTVWEGTANILG 435

Query: 452 LDVLNLL 458
           ++VL L+
Sbjct: 436 MEVLRLM 442


>gi|118431019|ref|NP_147195.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|116062346|dbj|BAA79340.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 543

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 211/451 (46%), Gaps = 37/451 (8%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNT 81
           A  +  +  G+N Y  D  L   +  F S   KE +L  LGEYV +   +   R+   + 
Sbjct: 6   AFGEVSMAYGLNHYLVDKPLRDTLRYFTS---KEPDLAGLGEYVGTELYEVAYRVDRLSW 62

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P    +   GER D V   PA    LRR++   ++    +R   P V    H+   A + 
Sbjct: 63  PVHVMWSVRGERSDTVLVDPA----LRRAVDRLMYEYGVNR--HPYVGGSWHE-HFAGIN 115

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L+     G +++ ++ +A  +       +      K + R     ++ PM   +      
Sbjct: 116 LVGDPGVGCILTITMQTAYALWKYGGEEL------KHYYRRLAGLDRPPMIGATW----- 164

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
            TE +GG+D+ A  +  +K  DG++ L+G+K+F S + ++D  ++ A+ EG       + 
Sbjct: 165 FTEIQGGSDLGANETVARKAGDGVWLLTGYKYFASGAGLADIALVTARPEGAPAGAKGLS 224

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK 313
            F VPR    G  N    +RLK+K G  +  T E+E  ++  +L+GD +      +ED+ 
Sbjct: 225 LFAVPRYRRGGGLN-YSVRRLKDKSGTIAVPTGEVELQDSEAYLIGDADKGIYYTLEDLM 283

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I    +SA  +V   R +  EA +YA+ R   G  +I+ P+++R + ++ + I  + AL+
Sbjct: 284 ISRIANSA-GAVGIARKAYLEAYNYAKHRRAFGKRIIEHPLVRRDLLEMEVLIEESLALT 342

Query: 374 FRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + F+++       S    YAR+M  I K    + A  V   AME  GG G++ E +
Sbjct: 343 HKAVDLFEKSTGDRPPYSMTYHYARLMTHIAKNMTAQAAARVTMLAMELFGGIGFLREYA 402

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R +RE+    I  G+ N   LD+L  + K
Sbjct: 403 VERWHREALITPIWEGTSNIQALDMLEAMWK 433


>gi|89097346|ref|ZP_01170236.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911]
 gi|89088169|gb|EAR67280.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911]
          Length = 557

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 195/442 (44%), Gaps = 24/442 (5%)

Query: 34  MNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y  D  L  ++      +F +   KELE  G        +          P+L  Y 
Sbjct: 1   MNFYKDDPNLAFVLKQYMYEDFFAWAEKELEAFGGLCAGEIDERAVHTDREGQPRLIKYD 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G     V  +  +   + ++ + G+   +  +    + RK  +    A+ YL++Q E 
Sbjct: 61  KMGNDISHVWLNEGYKKTVEQTYNAGIVGYV-HKEIPELGRKGNYVYSYAQGYLLSQTEP 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G     ++T       M T  +   +A +    +Y P   +  +         LTE++GG
Sbjct: 120 GFYCPVTLT-------MATAYLIDHYADEELKEKYLPHVISTGETELFEGATFLTERQGG 172

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR------VGCFLVPRL 261
           +D+ A   +   + DG Y + G K+F S+  +    M LA+ EG       +  FLVP  
Sbjct: 173 SDVGANEVKAV-LEDGQYRIYGEKYFASNAGACGVAMVLARREGAASGSKGLSLFLVPWR 231

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            E G  NGL  +RLK+K+G R+  + E+ F      L+GD +     + +   L  + ++
Sbjct: 232 KETGELNGLEIRRLKDKLGVRAVPSGEVVFHGAEAHLVGDADKGIHYMMEALNLSRICNS 291

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S+  M+ +  EA  YA  R+  G  L D P++K  +A +A      T+  F L   +D
Sbjct: 292 VASIGIMQRAFLEAKQYAFVRNAFGSRLADFPMVKETLAKLACKQEVETSAVFSLIALYD 351

Query: 382 E---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                ++  EE A  R++  + K    + A     E++E  GG+GYIE+    R  R++ 
Sbjct: 352 RVAAGEASREEEAMNRLLIALLKKETAEQAIHFAHESIEMHGGNGYIEDFVTPRLLRDAQ 411

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             ++  G+ N + L++L L+EK
Sbjct: 412 VLTVWEGTANILGLEILRLIEK 433


>gi|54293780|ref|YP_126195.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens]
 gi|53753612|emb|CAH15070.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens]
          Length = 567

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 35/367 (9%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P++  Y   G+R D+V  HPA+       +  G    I+  +    + K     +   
Sbjct: 73  NLPKIEQYNAIGQRDDRVIHHPAY-------VRAG--DIIYGSNLMQYLLKPGQMKKTLS 123

Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           L+L++    EAGH   P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               LTE +GG+D+ A  ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGANATRANLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E++F     + +GD  V+ G    
Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEIDFEGALAYPMGD--VAEGIHLV 294

Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           M+ +++L       SV GM R +   A +YA+ R      +I+ P++K ++A I  +  A
Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354

Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+
Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414

Query: 423 GYIEERS 429
           G IE  S
Sbjct: 415 GTIENFS 421


>gi|169826548|ref|YP_001696706.1| protein aidB [Lysinibacillus sphaericus C3-41]
 gi|168991036|gb|ACA38576.1| Protein aidB [Lysinibacillus sphaericus C3-41]
          Length = 555

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 191/441 (43%), Gaps = 24/441 (5%)

Query: 35  NAYSSDSLL-----VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L     + L   F S  H+EL   GE                  P+L  Y  
Sbjct: 13  NFFTGDETLQKVLEMMLDKEFSSYAHRELTDFGELCADAIDVRAKHTDRQGEPRLQRYNA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                ++T       M T  +   +A +   + + P   A            LTE++GG+
Sbjct: 132 FYCPVTLT-------MATAYLLDHYAEEEVKQRFLPHVCATGDLELYEGATFLTERQGGS 184

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLL 262
           D+ A   + + + +  Y L G K+F S+  M    ++LA+++G       +  F VP   
Sbjct: 185 DVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIDGAQAGSKGLTLFAVPWRN 243

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           EDGS N L  +RLK+K+G ++  + E+EF     +++GD N     + +   L  + +A+
Sbjct: 244 EDGSVNHLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDPNKGIYYMLEALNLSRICNAV 303

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+  MR    EA HY   R+  G  L   P+++  +   A  +    A  F L   +D+
Sbjct: 304 ASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLYDK 363

Query: 383 AKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             S     ++    R+   I K    + A    +EA+E  GG+GYIE+    R  R++  
Sbjct: 364 VTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQV 423

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            ++  G+ N + L+++ L++K
Sbjct: 424 LTVWEGTANILALELIRLVDK 444


>gi|307609596|emb|CBW99098.1| hypothetical protein LPW_08831 [Legionella pneumophila 130b]
          Length = 567

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 35/367 (9%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P++  Y   G+R D+V  HPA+       +  G    I+  +    + K     +   
Sbjct: 73  NLPKIEQYNAIGQRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123

Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           L+L++    EAGH   P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               LTE +GG+D+ A  ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E+ F     + +GD  V+ G    
Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGD--VAEGIHLV 294

Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           M+ +++L       SV GM R +   A +YA+ R      +I+ P++K ++A I  +  A
Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354

Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+
Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414

Query: 423 GYIEERS 429
           G IE  S
Sbjct: 415 GTIENFS 421


>gi|148658395|ref|YP_001278600.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148570505|gb|ABQ92650.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 558

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 189/460 (41%), Gaps = 50/460 (10%)

Query: 26  NQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARM---A 77
            QPP     N Y+ D +L      AL  +  + V  +L  +GE        EL R+    
Sbjct: 7   QQPPSL--GNQYTDDRVLRSFLRRALPRDVLAQVEPDLTTMGE----LAGGELYRLHLAD 60

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
             N P L  +   GER D +E  P W    R +   GL    ++R++    R        
Sbjct: 61  RLNEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGVFSR-------- 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT--NKAPMQKTS 195
                + Q    +L  PS        + T P    D A +      D T  ++A  +  S
Sbjct: 113 -----IVQFALVYLFHPSTD------VYTCPLAMSDGAARTLVEAGDATLIDRALPRLIS 161

Query: 196 ------VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                    G  +TE  GG+D++   +  +   DG++ L G KWF S+      + LA+ 
Sbjct: 162 RDPDRCWTSGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATTGQMALALARP 221

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +G       +  F +    ++G   G+   RLK+K+G R   T EL    T   L+G  N
Sbjct: 222 DGNPPGSRGLALFYIELRDDEGRLQGIRVNRLKDKLGTRKVPTAELSLEGTPARLVGAPN 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +  M  +  + +++ + S MR  +A A  YARRR      L  QP+    +A + 
Sbjct: 282 GGVRAIVPMLQVTRIWNSVSAASFMRRGIALARDYARRRVAFDAPLNRQPLHTETLATLQ 341

Query: 364 LDIAAATALSFRLANSF--DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +   A  LSF  A     +E     E   +  R++  ITK    + A  V++E +E  G
Sbjct: 342 AEFEGAFHLSFLTAGLLGAEETGVADERQRHLLRVLTSITKLTTGRQAVDVMSEVIEAFG 401

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+GY+E+  +    R++    I  G+ N + LD L  L +
Sbjct: 402 GAGYVEDTGLPTLLRDAHVLPIWEGTTNVLALDTLRALAQ 441


>gi|148360550|ref|YP_001251757.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila
           str. Corby]
 gi|296106385|ref|YP_003618085.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282323|gb|ABQ56411.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila str. Corby]
 gi|295648286|gb|ADG24133.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 567

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 35/367 (9%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P++  Y   G+R D+V  HPA+       +  G    I+  +    + K     +   
Sbjct: 73  NLPKIEQYNAIGKRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123

Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           L+L++    EAGH   P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               LTE +GG+D+ A  ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E+ F     + +GD  V+ G    
Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGD--VAEGIHLV 294

Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           M+ +++L       SV GM R +   A +YA+ R      +I+ P++K ++A I  +  A
Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354

Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+
Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414

Query: 423 GYIEERS 429
           G IE  S
Sbjct: 415 GTIENFS 421


>gi|52841039|ref|YP_094838.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296824|ref|YP_123193.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris]
 gi|52628150|gb|AAU26891.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750609|emb|CAH12016.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris]
          Length = 567

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 166/367 (45%), Gaps = 35/367 (9%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P++  Y   G+R D+V  HPA+       +  G    I+  +    + K     +   
Sbjct: 73  NLPKIEQYNAIGQRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123

Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           L+L++    EAGH   P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
               LTE +GG+D+    ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGTNATRANLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E++F     + +GD  V+ G    
Sbjct: 237 GLGLFLVPGRLDDGSPNHYYLRRLKQKIGTRTMATAEIDFEGALAYPMGD--VAEGIHLV 294

Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           M+ +++L       SV GM R +   A +YA+ R      +I+ P++K ++A I  +  A
Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354

Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+
Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414

Query: 423 GYIEERS 429
           G IE  S
Sbjct: 415 GTIENFS 421


>gi|294948872|ref|XP_002785937.1| Protein aidB, putative [Perkinsus marinus ATCC 50983]
 gi|239900045|gb|EER17733.1| Protein aidB, putative [Perkinsus marinus ATCC 50983]
          Length = 561

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 178/399 (44%), Gaps = 17/399 (4%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +E  R    +TP    Y   G R D++   P W  +   +  +GL    + R   P+ ++
Sbjct: 52  REAGRQCELHTPYHIPYDAWGNRIDEIWTCPQWKNMHIIAAQEGLIALAYTR---PLGKE 108

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            +   + A+LYL A     +    ++T  +   +  + R   +              +  
Sbjct: 109 LSRVYQLAKLYLFAPSSGLYSCPLAMTDGAAFVIEKSERYRNEQLEAALGHLMSQDGEEF 168

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSDAFIMLA 247
                   G  +TE+ GG+D+ A T+     S   DG++ L+G+KWF S+  +     LA
Sbjct: 169 WTS-----GQWMTERGGGSDVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLA 223

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +     GR+  F +P   + G  NGL   RLK+K+G R   T E+E + +    +     
Sbjct: 224 RTPDTNGRLEMFYLPARDQQGKLNGLKIVRLKDKLGTRQLPTAEMELNASKAVRVTYDGR 283

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + ++  +  + + + + +GMR  +  A  Y+ +R   G  L + P     +A++ +
Sbjct: 284 GLSMIMNLASITRIHNTVSAAAGMRRIIQLAKDYSTKREAFGRRLQELPAHVATLAELEV 343

Query: 365 DIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  AA +L     RL    + + +  +E    R++ P++K    + A  V ++ +E  GG
Sbjct: 344 EARAACSLWLEMARLLGKVEASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGG 403

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +G++E+  +  H R++   +I  G+ N   +DVL ++ +
Sbjct: 404 AGFMEDTGLPSHLRDAQVLAIWEGTSNVQAMDVLRVITQ 442


>gi|328951545|ref|YP_004368880.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451869|gb|AEB12770.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 534

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 20/336 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           +TE +GG+D+ A  +  +K         G K+F S + ++D  ++ A+ EG       + 
Sbjct: 156 MTEIQGGSDLGANRTLARKEDGAWRLFGGDKYFASGAGLADVALVTARPEGAPPGPKGLA 215

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVPRL   G+ N    +RLK+K G R+  + E+E   +  + +G L        +   
Sbjct: 216 LFLVPRLNRKGTLNYRV-RRLKHKSGTRAVPSGEVELEGSEAYPIGRLEEGIYYTLETLT 274

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L +A+ ++   + +  EA    R RH  G  L++QP+++  + D+A+  A   AL+F
Sbjct: 275 VSRLANAVAAMGIAQKAQLEARFRVRARHAFGKRLLEQPLVRYDLTDLAVRQAGGLALAF 334

Query: 375 RLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +FD A       +    YAR ++ + K      A A+   AME  GG G++EE ++
Sbjct: 335 HAVAAFDAAWRDRPPYTPAYHYARFLSHLAKNRTADHAAAITQRAMELFGGLGFLEEYAV 394

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG---TNLFEQLFSTLEQDLGSSGKKVITIL 487
           AR +RE+    I  G  N   LD+L  ++K        E++ +TL        +  + +L
Sbjct: 395 ARWHREALITPIWEGPSNIQALDMLEAMQKKHAHRPFLEEVTATLGAQPDPEAQATLKVL 454

Query: 488 RDSISLCKEDK-----GLARFLTEKIALASSAAALY 518
             ++S     +      LA+   E++A A++ AALY
Sbjct: 455 EATLSRLNGARPEAAAWLAKAALERLADAATVAALY 490


>gi|289806286|ref|ZP_06536915.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 214

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W    E   R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD       QK  + IG+G+
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           TEK+GG+D+ + T+  ++++D  Y L GHK
Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHK 214


>gi|167720412|ref|ZP_02403648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
          Length = 406

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 184/400 (46%), Gaps = 39/400 (9%)

Query: 33  GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           G+N ++SD    AL+      A F      EL  LG    S     LA  A+ N P L  
Sbjct: 25  GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144
               GE  + ++ HP +  L R +    GL   S  D +  P+V+        A  +L  
Sbjct: 83  RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135

Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           Q E G     S+T +    L    +  + + + P++ SR++D   +  M          +
Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186

Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
           TE+  G+D+  I ++  +   +DG   + L G KWF S+  +D  ++LA+ EG       
Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +L
Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAV 411
             ++A    +A +   +A    RI+ P+ K+  C+ A  V
Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRV 406


>gi|86159445|ref|YP_466230.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775956|gb|ABC82793.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 559

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 195/448 (43%), Gaps = 39/448 (8%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMAN 78
           L  PP+    +A+ +D LL   +A   P    S +  EL  LG        AQ+LA    
Sbjct: 5   LQDPPVLP--HAFDADPLLQEYLARTLPPDVLSAISPELRELGALASGPLAAQQLAE--R 60

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P L  + P G R D++E  P W    R +   GL  + ++R   P  R         
Sbjct: 61  LVEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERRHGPHSR--------- 111

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKT 194
               + QL   +L+ PS+   +    MT    R   D AP+       P  T++ P +  
Sbjct: 112 ----VHQLAMVYLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARMW 167

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
           +   G  +TE+ GG+D++   +  ++  +  + L G KWF S+  ++  + LA+ EG   
Sbjct: 168 TS--GQWMTERAGGSDVSGTETVARRDGEA-FRLWGTKWFSSATTAEMALALARPEGNPP 224

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  F +     DG+ NG+   RLK+K+G R   T EL         +   +     
Sbjct: 225 GSAGLALFYLETRGPDGASNGILVNRLKDKLGTRKLPTAELTLEGALAQPVAGTSGGVRA 284

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A
Sbjct: 285 ITPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAGLEAEREA 344

Query: 369 ATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              L+FR       A++   +    A  R + P+ K    K A AV ++A+E  GG+GY+
Sbjct: 345 GFLLAFRAVELLGRAEAGEADPGARALLRAVTPLAKLTTGKQAVAVASDAVEAFGGAGYV 404

Query: 426 EERSIARHYRESPANSILLGSGNAMVLD 453
           E+  + R  R++    I  G+ N + L+
Sbjct: 405 EDTGLPRLLRDAQVLPIWEGTTNVLALE 432


>gi|313902989|ref|ZP_07836384.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466713|gb|EFR62232.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 539

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 200/459 (43%), Gaps = 68/459 (14%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G R D+V   PA  ALLR                 P+ R           Y +  L A  
Sbjct: 70  GHRVDRVRLSPAQQALLR--------------ELAPMNRPPYEGGSWHHHYALGYLVA-- 113

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              P +     +   T   +HK +AP+          KA + +        +TE +GG+D
Sbjct: 114 --DPGIYCILTITNQTAYVIHK-YAPEF------AEWKAKLLRGEFWGATWMTEVQGGSD 164

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLE 263
           + A T Q  +  D  + L G K+F S + ++D  ++ A+ EG       +  FLVPR+  
Sbjct: 165 LGANTLQATRDGDA-WRLDGEKYFCSGAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNR 223

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N    +RLK+K   R+  + E++F  +  FL+G+              IY    ++
Sbjct: 224 AGELN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEKG----------IYYTLEVL 272

Query: 324 SVSGMRVSLAEAIHYARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATAL 372
           +VS +  ++A  +  AR+ H+            G  L+D P+++R + D+A+ IA    L
Sbjct: 273 TVSRLANAIA-GMGIARKAHLEVLERVRRRRSFGRQLVDHPLIRRDLTDMAVRIAGGLVL 331

Query: 373 SFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            F  A+ F    DE    +    YAR ++ + K      A  V   AME  GG G++EE 
Sbjct: 332 GFHAADLFEKAWDELPPYTSRYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEY 391

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGS----SGKK 482
           ++AR +RE+    I  G  N   LD+L  + K      F   F  + +  G+    + ++
Sbjct: 392 AVARWHREALITPIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIAMLEKAGTPEARTARE 451

Query: 483 VI--TILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
           VI  T++R + S  +E +  A+  T ++A A+    LY+
Sbjct: 452 VIEGTLVRLAGSEPEEAQWYAKDATARLADAAQVGLLYK 490


>gi|159899922|ref|YP_001546169.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892961|gb|ABX06041.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 556

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 204/501 (40%), Gaps = 53/501 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            NQP   +G N YS D LL   +     A+  S +   L+ +G+   +   Q L      
Sbjct: 4   FNQPAPQLG-NQYSDDRLLQLYLRRRLPADVLSQIKPALQTIGDLAGNELYQ-LQLADRL 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N PQL  +   GER D++   P W    + +   GL  + ++++F    R          
Sbjct: 62  NEPQLTQWDAWGERIDQIVLTPLWQRAEQIAASYGLIATAYEQTFHEYSRT--------- 112

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVH-----------KDWAPKIFSREYDPTNK 188
                Q    +L  PS    S    MT                +   P + SR+ D    
Sbjct: 113 ----CQFALAYLFHPSSDVYSCPLAMTDGAARTLLQAGNQALIERAIPHLISRDPDQFWT 168

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           +         G  +TE  GG+D+    +  ++  DG + L G KWF S+  S   + LA+
Sbjct: 169 S---------GQWMTESTGGSDVGLSETIARQAEDGTWRLYGRKWFSSATTSQMALTLAR 219

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            EG       +  F V    + G    +   RLK+K+G R   T EL    T    +  L
Sbjct: 220 PEGNPAGGRGLALFYVETRDQRGRLTQIEVNRLKDKLGTRKVPTAELNLLGTPAIPVQGL 279

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +  M  +    +++ +V  MR  +A A  YA++R   G +L  +P+    +A +
Sbjct: 280 RDGVRAIVPMLQITRTWNSVSAVGFMRRGMALAQDYAQKRWAFGSLLNQKPLHVDTLAGL 339

Query: 363 ALDIAAATALSFRLAN--SFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             + A A  L+F L      DE  +S  ++    R++  I K    + A    +E +E  
Sbjct: 340 QAEYAGAFLLTFYLIELLGLDETGRSTPQQRQLLRLLTSIAKLTTARQAVNHTSEIIESF 399

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF----EQLFSTLEQD 475
           GG+GY+E+  +    R++   SI  G+ N + LD L  L +   ++    EQ+   L   
Sbjct: 400 GGAGYVEDTGLPSLLRDAQVLSIWEGTTNVLALDSLRALSEDPGIWPVLREQVNLWLSNA 459

Query: 476 LGSSGKKVITILRDSISLCKE 496
              S  + I +++ ++  C++
Sbjct: 460 HDPSLSQAIVVVQTALDRCEQ 480


>gi|220918318|ref|YP_002493622.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956172|gb|ACL66556.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 559

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 200/447 (44%), Gaps = 39/447 (8%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMANY 79
             PP+    +A+ +D LL   +A   P    S +  EL  LG        AQ+LA     
Sbjct: 6   QDPPILP--HAFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQQLAE--RL 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P L  + P G R D++E  P W    R +   GL  + ++R          H I  +R
Sbjct: 62  VEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERR---------HGI-LSR 111

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKTS 195
           ++ MA +   +L+ PS+   +    MT    R   D AP+       P  T++ P +  +
Sbjct: 112 VHQMAMV---YLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARTWT 168

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
              G  +TE+ GG+D++   +  +   +  + L G KWF S+  ++  + LA+ EG    
Sbjct: 169 S--GQWMTERAGGSDVSGTETVARPDGEA-FRLWGTKWFSSATTAEMALALARPEGNPPG 225

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F +   L DG+ NG+   RLK+K+G R   T EL         +  L+     +
Sbjct: 226 SAGLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAI 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M  +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A 
Sbjct: 286 SPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAG 345

Query: 370 TALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             L+FR   L    +  ++ +   A  R + P+ K    K A AV ++A+E  GG+GY+E
Sbjct: 346 FLLAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVE 405

Query: 427 ERSIARHYRESPANSILLGSGNAMVLD 453
           +  + R  R++    I  G+ N + L+
Sbjct: 406 DTGLPRLLRDAQVLPIWEGTTNVLALE 432


>gi|197123520|ref|YP_002135471.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196173369|gb|ACG74342.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 559

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 200/447 (44%), Gaps = 39/447 (8%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMANY 79
             PP+    +A+ +D LL   +A   P    S +  EL  LG        AQ+LA     
Sbjct: 6   QDPPVLP--HAFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQQLAE--RL 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P L  + P G R D++E  P W    R +   GL  + ++R          H +  +R
Sbjct: 62  VEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERR---------HGV-LSR 111

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKTS 195
           ++ MA +   +L+ PS+   +    MT    R   D AP+       P  T++ P +  +
Sbjct: 112 VHQMAMV---YLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARTWT 168

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
              G  +TE+ GG+D++   +  +   +  + L G KWF S+  ++  + LA+ EG    
Sbjct: 169 S--GQWMTERAGGSDVSGTETVARPDGEA-FRLWGTKWFSSATTAEMALALARPEGNPPG 225

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F +   L DG+ NG+   RLK+K+G R   T EL         +  L+     +
Sbjct: 226 SAGLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAI 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M  +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A 
Sbjct: 286 SPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAG 345

Query: 370 TALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             L+FR   L    +  ++ +   A  R + P+ K    K A AV ++A+E  GG+GY+E
Sbjct: 346 FLLAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVE 405

Query: 427 ERSIARHYRESPANSILLGSGNAMVLD 453
           +  + R  R++    I  G+ N + L+
Sbjct: 406 DTGLPRLLRDAQVLPIWEGTTNVLALE 432


>gi|153005858|ref|YP_001380183.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029431|gb|ABS27199.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 560

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 210/482 (43%), Gaps = 57/482 (11%)

Query: 25  LNQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLS-CTAQELARMAN 78
              PP     NAY SD LL      AL    P     ELE LGE       AQ+ A    
Sbjct: 4   FQDPPRLA--NAYLSDPLLREHLARALSGTLPEA-EPELEHLGELAAGRLFAQQAAE--R 58

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
           +  P+L  +   G R D+VE  P W      +   GL  + ++R       +     R  
Sbjct: 59  HLEPRLEPFDAWGRRVDRVELTPLWREAAALAARHGLVAAAYER-------RHGGASRVH 111

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA---------PKIFSREYDPTN 187
           +L L+      +++ PS+   +    MT    R   D           P++ SR  DP  
Sbjct: 112 QLALV------YVLEPSLDVYACPLAMTDGAARTLLDAGNAALVARALPRLTSR--DPAR 163

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                 TS   G  +TE+ GG+D++   +  ++  +  + L G KWF S+  ++  + LA
Sbjct: 164 ----MWTS---GQWMTERTGGSDVSGTETVARRDGEA-WRLHGTKWFSSATTAEMALALA 215

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           + +G       +  F +    EDGS NG+   RLK K+G R   T EL         +  
Sbjct: 216 RPDGAPAGSRGLALFYLETRDEDGSTNGVLVNRLKEKLGTRKLPTAELTLDGALALPVSG 275

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L      V  M  +    +++++ +GM+ +LA A  YARRR   G  L  +P+    +A 
Sbjct: 276 LADGVRAVAPMLTVTRTWNSVVAAAGMQRALALARDYARRRAAFGAPLARKPLHADTLAG 335

Query: 362 IALDIAAATALSFRLANSFDEAK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +  +   A  L+FR A     A+    S +E  A  R + P+ K    K A AV +EA+E
Sbjct: 336 LEAEREGAFLLAFRAAALLGRAECGEASDAERLAL-RAVTPLAKLTTGKQAVAVASEALE 394

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           C GG+GY+E+  + R  R++    I  G+ N + LDVL  L  G    E L + + + LG
Sbjct: 395 CFGGAGYVEDTGLPRLLRDAQVLPIWEGTTNVLALDVLRAL-AGEGTAEALAAEIRRHLG 453

Query: 478 SS 479
            +
Sbjct: 454 DA 455


>gi|16081732|ref|NP_394117.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum
           DSM 1728]
 gi|10639812|emb|CAC11784.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum]
          Length = 538

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 198/445 (44%), Gaps = 47/445 (10%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           MN +S D +L  ++      +  +L+ +G YV     ++   + +Y  P L  +G    R
Sbjct: 1   MNYFSDDIVLQDVLNYLGYDIDDKLQEMGRYVSEEMIEDSIFIDHYGEPVLQMWGILDNR 60

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D +        ++ R +  G+   I                 A+   LM    +G+L+S
Sbjct: 61  TDGIWISRTHQNMIDRLLDMGVVSKI-----------------ASENDLMYHFISGYLIS 103

Query: 154 PSVTSASMVALMTTP---RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRG 207
            +    ++     T    R + D   + F   Y  ++            LG    TE +G
Sbjct: 104 DAGLFCTLTLTGQTAYGLRKYGDARLQQFLNHYANSDHW----------LGATYYTEIQG 153

Query: 208 GTDIAAITSQGQKISDGIYCLSG-HKWFLSSP-MSDAFIMLAQVEGR------VGCFLVP 259
           G+D+ A  +   +  D  Y L+G +K+F S+  ++D  I+ A++EG       +  F VP
Sbjct: 154 GSDLGANQTTAVRSGDK-YILNGENKYFASNAGLADGAIVTARMEGARPGAKGISVFFVP 212

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L  DG+ N    +R+K+K+G     T E+   ++ G+LLGD         ++  +  +D
Sbjct: 213 TLRSDGTRN-YEIRRIKDKLGTIMVPTGEVVLKDSEGYLLGDEKNGIYIALEILEVSRID 271

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AI ++   R +L EA  YA +R   G  +ID P+M R +A++  ++ A+T LS   A+ 
Sbjct: 272 DAIAAMGIARKALWEAYFYANKRTAFGKPIIDHPLMLRDLAEMESEVEASTVLSMIAADM 331

Query: 380 FDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           F++A        ++   AR    + K      +  V    ME  GG G+++E  + + +R
Sbjct: 332 FNKASHLKPPYDDQYHMARAFTHMAKNIASWSSDYVTRYTMEVFGGKGFLKEFPVEKFHR 391

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   S+  G+ N   LD L +++K
Sbjct: 392 DSIVTSLWEGTSNIQALDFLEIVQK 416


>gi|289581512|ref|YP_003479978.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289531065|gb|ADD05416.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 625

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 195/454 (42%), Gaps = 67/454 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L   GE V    A     + N+ +P+L  Y   GE  + V +  A +   R +   G+  
Sbjct: 47  LSAFGETVGHTIADNADDIDNH-SPELEPYDKYGEVQNWVRYPEAQYENERLTYEQGIVA 105

Query: 118 SIWDRSFE-PVVRKQ----AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
                SFE P  R +    +H +  A  YL++  + G     ++T+ + + L    R   
Sbjct: 106 D----SFEAPPGRDEPMPLSHNL--AMQYLLSYADPGFDCPVAMTAGAALVLEKFGREDD 159

Query: 173 ---DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCL 228
              ++   + SR+Y+   +  M          LTEK+GG+D+ A  ++ +   S G + L
Sbjct: 160 VLCEYYDALTSRDYEDLIEGAM---------FLTEKQGGSDVGANETRAEWDESAGYWRL 210

Query: 229 SGHKWFLSSPMSDAFIMLAQVE----GRVGC--FLVPRLLEDG----------------- 265
           SG KWF S+  ++  + LA+ E    G  G   FLVP    DG                 
Sbjct: 211 SGEKWFCSNIDAEGTLALARTENAPAGTAGLSMFLVPHADPDGVSRDDSDDADGNGPYTK 270

Query: 266 ------------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
                         N   Y+RLK+K+G  S  T E+EF+    +L+G+       + +M 
Sbjct: 271 GQRREDGPLAPAETNDQFYRRLKDKLGTISVPTGEVEFTGAKAYLVGEEEAGFRQMAEML 330

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L +A  S   +   L E+  YA  R   G  +   P+M+  + D+A+   AAT  +
Sbjct: 331 NLERLSNAAASCGIIGRVLLESKIYAANREAFGETIDQYPLMRADLVDMAVTHEAATTYT 390

Query: 374 F---RLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           F   RL +  + A+   E A  A    R++ PI K    +MA    +  ME  GG+GY+ 
Sbjct: 391 FEAARLLSKRERAERAGETADDAYRLMRLLIPIAKARTARMAVDTASYGMEIHGGNGYVN 450

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E    R  R++    I  G+ N + LDVL  LE+
Sbjct: 451 EFVTNRLLRDAQVLPIWEGTENILSLDVLRALER 484


>gi|4157980|emb|CAA76079.1| SOS response Ada system protein [Geodia cydonium]
          Length = 446

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 26/288 (9%)

Query: 199 GLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-- 255
           G  +TE+RGG+D+   T +   K  DG Y L G+KWF S+  +D    LA+V+   G   
Sbjct: 40  GQWMTERRGGSDVGQSTDTVALKQEDGSYRLYGYKWFTSASDADITFTLARVQDTHGLVT 99

Query: 256 --------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                   F +   LE  + N L   RLK+K+G R   T E+    +   L+G       
Sbjct: 100 PGSRGLSMFYLKTQLESEAHNRLELVRLKDKLGTRQLPTAEVLLDGSTAHLVGIEGRGVA 159

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  +  L ++++S + MR  L  +  Y  RR V G  L DQP+    +  + ++  
Sbjct: 160 HISPMLTITRLHNSVISSAYMRRILQLSRDYCTRRTVFGKYLADQPLHMHTLGQMEVETR 219

Query: 368 AATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             T L+    RL    +   +   ++   R++  I K +  K A +VI+E +E  GG+  
Sbjct: 220 GCTLLALETARLVGLQEAGLATKSDSLLLRLLNSINKLYTAKQAVSVISEGLESFGGA-- 277

Query: 425 IEERSIARHY-----RESPANSILLGSGNAMVLDVLNLLEK-GTNLFE 466
               +I RH+     R++   +I  G+ N + LD+L +L+K G  +FE
Sbjct: 278 ----AIWRHWSPCLLRDAQVGTIWEGTTNVLSLDLLRVLQKVGQEIFE 321


>gi|313903798|ref|ZP_07837187.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313465986|gb|EFR61511.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 529

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 224/526 (42%), Gaps = 83/526 (15%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCT-AQELARMANYNTPQ-LHAYGP 89
           G N +  D  L  ++A++ P+    E +L     LS     E+A   +++ P  L  +  
Sbjct: 9   GQNHWEVDPDLRHVLAHYWPAFTAHEAQLRRFGALSGKEVYEVAYHVDHDAPPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   PA  ALLR                 P+ R           Y +  L A 
Sbjct: 69  DGHRVDRVRLSPAQEALLR--------------ELAPMNRPPYEGGSWHHQYALGYLVA- 113

Query: 150 HLMSPSVTSASMVALMTTPRVHK------DWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               P +     +   T   +HK      +W  K+   E+                  +T
Sbjct: 114 ---DPGIYCILTITNQTAYIIHKYAAEFGEWKDKLLRGEFWGAT-------------WMT 157

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256
           E +GG+D+ A T Q  +  D  + L G K+F S + ++D  ++ A+ +G       +  F
Sbjct: 158 EVQGGSDLGANTLQATRNGDA-WRLDGEKYFCSGAGLTDVAVVTARPQGAPAGPKGLALF 216

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR+   G+ N    +RLK+K   R+  + E++F  +  FL+G+              I
Sbjct: 217 LVPRMNRAGALN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEQG----------I 265

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVS-----------GGILIDQPVMKRAIADIALD 365
           Y    +++VS +  ++A  +  AR+ H+            G  L+D P+++R + D+A+ 
Sbjct: 266 YYTLEVLTVSRLANAIA-GMGIARKAHLEVLERVRRRRSFGRPLVDHPLIRRDLTDMAVR 324

Query: 366 IAAATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           IA    L F  A+ F    DE    +    YAR ++ + K      A  V   AME  GG
Sbjct: 325 IAGGLMLGFHAADLFEKAWDELPPYTARYHYARFLSHLAKNRTADHAAEVTRLAMELFGG 384

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGS- 478
            G++EE ++AR +RE+    I  G  N   LD+L  + K      F   F  + +  G+ 
Sbjct: 385 LGFLEEYAVARWHREALITPIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIPMLEKAGTA 444

Query: 479 ---SGKKVI--TILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
              + ++VI  T+ R + S  +E +  A+  T ++A A+    LY+
Sbjct: 445 EARTAREVIEATLARLAGSKPEEAQWYAKDATARLADAAQVGLLYK 490


>gi|229578308|ref|YP_002836706.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228009022|gb|ACP44784.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
          Length = 546

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLVLVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N L  +RLK K G  S  T E+EF+++  +L+G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|294952949|ref|XP_002787528.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239902534|gb|EER19324.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 1295

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 137/273 (50%), Gaps = 9/273 (3%)

Query: 199  GLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
            G  +TE+ GG+D+ A T+     S   DG++ L+G+KWF S+  +     LA+     GR
Sbjct: 906  GQWMTERGGGSDVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLARTPDTNGR 965

Query: 253  VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            +  F +P   ++G  NGL   RLK+K+G R   T E+E + +    +         + ++
Sbjct: 966  LDMFYLPTRDQEGKLNGLKIVRLKDKLGTRQLPTSEMELNASKAVRVTYNGRGLSMIMNL 1025

Query: 313  KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              +  + + + + +GMR  +  A  Y+ +R   G  L + P     +A++ ++  AA +L
Sbjct: 1026 ASITRIHNTVSAAAGMRRIIQLAKDYSTKRVAFGRRLQELPAHVATLAELEVEARAACSL 1085

Query: 373  SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                 RL    + + +  +E    R++ P++K    + A  V ++ +E  GG+G++E+  
Sbjct: 1086 WLEMARLLGKVEASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGGAGFMEDTG 1145

Query: 430  IARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            +  H R++   +I  G+ N   +DVL ++ + T
Sbjct: 1146 LPSHLRDAQVLAIWEGTSNVQAMDVLRVITQTT 1178


>gi|163846383|ref|YP_001634427.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524149|ref|YP_002568620.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667672|gb|ABY34038.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448028|gb|ACM52294.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 485

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 183/396 (46%), Gaps = 37/396 (9%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
            TP L  +   G+R D++ +   +  ++R+    G+   IW R F        + +    
Sbjct: 47  GTPWLRMFDRQGQRVDEILYPAEYWRMVRQGYQSGV---IW-RVFTETSLVPHYLLG--- 99

Query: 140 LYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            YL A  +AG L  P   S+++A  +A   T  V   + P +             Q  +V
Sbjct: 100 -YLTAFYDAG-LYCPYTVSLSTAVPLAKYGTEAVKAQFLPLLLR-----------QDATV 146

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ------- 248
             G   +TE  GG+D+    +      DG + LSG K+F S+  ++  ++ A+       
Sbjct: 147 WQGATWMTEIGGGSDLGTTVATIAVAEDGRWYLSGDKYFASNVGAELAVVAARFATGPAD 206

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           + G +G FLVPR   DGS N    +RLK+KIG R+  T E+E   +  +LLG        
Sbjct: 207 IRG-LGLFLVPRYRADGSLN-YTIRRLKDKIGTRAVPTGEVELRRSEAYLLGRAEWGIYL 264

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +   L  + +++ SV+  + +LAEA+ +A +R   G  +   P++KR I +  +++ A
Sbjct: 265 ILETLNLSRVANSVGSVALAQRALAEAVSFAHQRRAFGKPIAAHPLLKRQIEERIVELEA 324

Query: 369 ATALSFR----LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A AL++     L   +       E+    R++A + KYW  + A       ME  GG G 
Sbjct: 325 AFALAWEAVCLLEQVWHVTPPYPEQYHLFRLLAHLAKYWTAEFAVQTAKWGMEVHGGIGT 384

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E +  R  R++    I  G+ +  +LD L ++E+
Sbjct: 385 LAEYNAERWLRDAMILPIWEGTPHRQILDGLEVMER 420


>gi|227826884|ref|YP_002828663.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227458679|gb|ACP37365.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
          Length = 546

 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N L  +RLK K G  S  T E+EF+++  +L+G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|15898411|ref|NP_343016.1| partial transposase ISC1225 [Sulfolobus solfataricus P2]
 gi|229582993|ref|YP_002841392.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238619012|ref|YP_002913837.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|13814828|gb|AAK41806.1| Partial transposase ISC1225 [Sulfolobus solfataricus P2]
 gi|228013709|gb|ACP49470.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238380081|gb|ACR41169.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 546

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N L  +RLK K G  S  T E+EF+++  +L+G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|291297408|ref|YP_003508806.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290472367|gb|ADD29786.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 534

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 161/340 (47%), Gaps = 23/340 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253
           +TE +GG+D+ A  +Q + + +G ++ L G K+F S + ++D  I+ A+ EG       +
Sbjct: 156 MTEVQGGSDLGA--NQVRAVPEGAVWRLWGDKYFSSGAGLTDYAIVSARPEGAPAGPKGI 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVPRL   G  N    +RLK+K+  R+  + E+EF+     L+G        + +  
Sbjct: 214 ALFLVPRLDSQGQLN-YRVRRLKDKLATRAVPSGEVEFAGAEAHLIGRAEEGIYYILETL 272

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L +A  ++   R +  EA+   + R   G  L + P+++R + D+A+ IA   AL+
Sbjct: 273 TLSRLANAAGAMGLARKAQLEALFRVQARRAFGKKLEEHPLIRRDLTDLAVRIAGGLALT 332

Query: 374 FRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           FR   ++DEA       S    YAR++A + K    +         ME  GG G++E+ +
Sbjct: 333 FRAVAAWDEAWQETPPYSPRYHYARLLAHLAKARTAEHGTYCTQLGMELFGGVGFVEDFA 392

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL-EKGTN--LFEQLFSTLEQDLGSSGKKVITI 486
           IAR  RE+    I  G  N   LD L +L  KG       +  + LE       +  +  
Sbjct: 393 IARLAREALITPIWEGPANVQALDTLEVLFRKGAAEPFLAEFGAKLEAIQSEEARLALAR 452

Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYRAG 521
           LR ++   +     E +  A+     +A A++ A LY  G
Sbjct: 453 LRHTLDYLQTLSPEEAQWHAKEALRTLADAATVALLYELG 492


>gi|323473995|gb|ADX84601.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
          Length = 546

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 211/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N    +RLK K G  S  T E+EF+++  +L+G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFFI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|229584058|ref|YP_002842559.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019107|gb|ACP54514.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 546

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 211/453 (46%), Gaps = 41/453 (9%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++  + G     ++T+ +  AL    +   +   K  S     +++     T      
Sbjct: 115 YLVS--DPGIACILTITNQTAYALY---KYGSEELKKYVSYLIGDSDELLFGAT------ 163

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR------ 252
             TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G       
Sbjct: 164 WFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKG 222

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP+    G  N L  +RLK K G  S  T E+EF+++  +L+G+       + + 
Sbjct: 223 LSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITED 281

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     +
Sbjct: 282 LMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVV 341

Query: 373 SFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G++EE
Sbjct: 342 TFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEE 401

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             I R +RE+    I  G+GN   L++L  + K
Sbjct: 402 FPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|323476950|gb|ADX82188.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 546

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 211/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+ K+F S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N    +RLK K G  S  T E+EF+++  +++G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFFI-RRLKRKSGTNSVPTGEVEFNSSEAYIIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|227830022|ref|YP_002831801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|227456469|gb|ACP35156.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
          Length = 546

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 210/456 (46%), Gaps = 47/456 (10%)

Query: 26  NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
           N P  +I    G N ++ D  L  ++  F   V  +   LGE+       E+A   +   
Sbjct: 5   NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61

Query: 82  PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +H  +   GER D+V   P+  A ++R I D      +D +  P   +  HK   A +
Sbjct: 62  RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL++         P +     +   T   ++K  + ++  ++Y P     +   S  +  
Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160

Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQVEGR--- 252
           G    TE +GG+D+ +   + +  +   + L G+    +S   ++D  ++ A+  G    
Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKHFASGVGLADLALVSARPMGSKSG 219

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FLVP+    G  N L  +RLK K G  S  T E+EF+++  +L+G+       +
Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +  ++  L +A+ ++   R S  E+ +Y++ R   G  LI+ P++++ + ++ L I   
Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338

Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++F+  + F ++        +E+  YAR++  I+K+   ++A  V   AME  GG G+
Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +EE  I R +RE+    I  G+GN   L++L  + K
Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434


>gi|297565898|ref|YP_003684870.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296850347|gb|ADH63362.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 533

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 26/340 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           +TE +GG+D+ A  ++  ++   ++ L G K+F S + ++D  ++ A+ EG       + 
Sbjct: 156 MTEVQGGSDLGANLTRA-RMDGEVWRLEGDKYFSSGAGITDYAVVSARPEGAPVGPKGLA 214

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVPRL   G  N    +RLK K+  R+  + E+E +NT  +L+G          ++  
Sbjct: 215 LFLVPRLDRAGHLN-YRVRRLKEKLATRAVPSGEVELANTEAYLVGKAEEGIYYTLEVLT 273

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L +A  ++   R +  EA+   +RR   G  L   P+++R + D+A+ IA   AL+F
Sbjct: 274 LSRLANAAGAMGLARKAQLEALTRTKRRTAFGKTLDAHPLIRRDLTDLAVRIAGGLALTF 333

Query: 375 RLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           R   +++ A S     S    YAR +  + K    +   +    AME  GG G++E+ +I
Sbjct: 334 RAVQAWEGAWSERPPYSSRYHYARFLTHLAKARTAEHGTSCTQLAMELFGGVGFVEDFAI 393

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILR 488
           AR  RE+    I  G  N   LD L ++ +   L  F   F    + +G+   +      
Sbjct: 394 ARLAREALITPIWEGPANVQALDTLEVMFRKGALEPFLGEFVPALERVGTPSSR------ 447

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
             I+L   +K LAR    + A    A  L +  +  +ADV
Sbjct: 448 --IALEALEKTLARL---RQAEPEEAQWLAKESLRTLADV 482


>gi|50545948|ref|XP_500511.1| YALI0B04906p [Yarrowia lipolytica]
 gi|49646377|emb|CAG82739.1| YALI0B04906p [Yarrowia lipolytica]
          Length = 577

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 201/486 (41%), Gaps = 71/486 (14%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMA 77
           F  ++P L   +N Y  +S L  +   + S      V  EL  LG+YV+S    E    A
Sbjct: 8   FFQDRPTL---LNQYDGNSALKKVAEFYLSHKTLAAVLPELRELGDYVISKEIFEWQEDA 64

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
             N P++   G  G   +++     W  L  ++   G+    ++R +     +++  +  
Sbjct: 65  ETNIPRVEHQGTFGHPKNRLIVSQGWKLLKAKAFAAGIISDSYERKYA----EESRVVAF 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH---KDWAPKIFSREYDPTNKAPMQKT 194
            + +L +   A  L   ++T  +   L    +     ++W   + S   DPT        
Sbjct: 121 LKNWLFSASSATVLCPFAMTDGTARVLEVFAKDDERLQEWYNHLVSS--DPTQ------- 171

Query: 195 SVAIGLGLTEKRGGTDI----AAITSQGQK--------------------ISDGI----- 225
           +   G  +TE+ GG+D+       TS  +K                     SD +     
Sbjct: 172 AWTSGQWMTERPGGSDVRNTETVATSSYRKEEGAESRPNASANNQIENNATSDIVTVGTG 231

Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIG 280
              Y ++G KWF S+  S+  I+LA+ EG  G  CF + +L    +P  +   RLK K G
Sbjct: 232 PKDYTVNGFKWFSSATDSECSILLAKREGETGLSCF-IGKL----TPETVIINRLKKKFG 286

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             +  T ELE  N    LLG  N     +  +  +  L S+  ++S    SL  A  YA 
Sbjct: 287 TIALPTAELELRNHPVILLGQANNGVPVIATVLNITRLYSSTSALSCYGRSLHIAKQYAL 346

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR----LANSFDEAKSRSEEAAYARIM 396
            R V G  L   P   + +A   + +     L F     L  S     S   EA   R++
Sbjct: 347 VRSVFGKKLSATPAHLKTLAHEQVQLTGLMFLLFEGISLLGQSEVTGLSPHREAVL-RVL 405

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLD 453
             I K +CCK A    +E ME +GG+GY+E     +IAR YRES  N I  G+ N +  D
Sbjct: 406 PGIAKAYCCKKATIGCSECMEALGGAGYLEHEIDINIARLYRESQVNVIWEGTTNVLSDD 465

Query: 454 VLNLLE 459
           V  +++
Sbjct: 466 VARVMK 471


>gi|121599453|ref|YP_994234.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385253|ref|YP_001028113.1| protein aidB [Burkholderia mallei NCTC 10229]
 gi|121228263|gb|ABM50781.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
          Length = 261

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 6/187 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     NA+ +D+ LV  +  +  S     L   G  + +     LA +AN + P+L
Sbjct: 14  NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P GER D +EFHP+WH LL R   +GLH   +    +P  R  A   R A  +L A
Sbjct: 74  ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           QLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ +G+G+TE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 205 KRGGTDI 211
           K+GG+D+
Sbjct: 189 KQGGSDV 195


>gi|257075763|ref|ZP_05570124.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 550

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 181/433 (41%), Gaps = 31/433 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N Y  D     ++ +F    H  L  LG Y      +    +   + P    +   G+
Sbjct: 15  GKNHYDIDKPFQKIL-DFYMGKHLNLSPLGAYAGKDLYETTDYIDKVSQPLQKMWSIDGK 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D +   P    +L + IH+             + R   H       Y M  L A    
Sbjct: 74  RIDSILISPMEKHVLDKLIHE-----------YGISRPYFHGKSIMEHYAMGYLVA---- 118

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
            P +     +   T   +HK +AP  F  +Y P      + T +      TE +GG+D+ 
Sbjct: 119 DPGIYCILTLTHQTAYAIHK-YAPD-FQNDYVPGLIGDTKDTLLG-ATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP------MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           A  ++ +   +G++ L+G K+F S+       ++ AF         +  FL+PR   DG 
Sbjct: 176 ANKTRAES-GNGLWYLTGDKYFASNAGLADVALTSAFHGDNHGAKGLSLFLIPRKNNDGE 234

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N    +RLK K   +S  + E+E  ++  +++GD   +   + +  ++  LD+A  +  
Sbjct: 235 LN-YRLRRLKEKSATKSVPSGEVELDSSEAYMIGDAGKAIYYITEDLMVSRLDNAAAACG 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR----LANSFDE 382
             R +  EA +Y  +R   G +LI+ P + + + D+ + +  + AL+F+      NS + 
Sbjct: 294 IARKAYLEAYYYTGKRKTFGKLLIEHPGIVKDLLDMEVLLEGSIALTFKSIELFNNSINS 353

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E  Y R+M  I K      +  +   A E  GG G++ E  + R +RE+    I
Sbjct: 354 KPPYDDEYNYTRLMTHIVKNITADSSARITQMATELHGGIGFLSEFPVERWHREALITPI 413

Query: 443 LLGSGNAMVLDVL 455
             G+ N   LD+L
Sbjct: 414 WEGASNIQALDML 426


>gi|255951270|ref|XP_002566402.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593419|emb|CAP99803.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 633

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 221/504 (43%), Gaps = 63/504 (12%)

Query: 17  QPS--DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCT 69
           QP+  DS +  +  PL    N Y+SD SL  AL    PS     V   L   G   +S  
Sbjct: 5   QPATADSGYITDPGPL---ENTYTSDPSLQRALAWYLPSATLQSVQPHLTQFGAEAISEQ 61

Query: 70  AQELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            +E +  A  N P + ++   G+R+D  ++     W  L +    + +  + +D+S   V
Sbjct: 62  VREWSADAERNVPYVKSHNVWGKRYDYDRLVTTEGWKQLGKWGARNRIVSAGYDKSLG-V 120

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-T 186
            R+    ++ A  YL +   +  L S  ++     A + + R++K  +   F   +    
Sbjct: 121 DRR---TVQYALNYLYS--PSSGLYSCPISMTDGAAFILSSRINKLPSTHPFHTAFQGLI 175

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIA-----------AITSQGQKISDGIYCLSGHKWFL 235
           ++     TS   G  +TE+ GG+D+            A +S  + + DG Y +SG K+F 
Sbjct: 176 SEKDDHWTS---GQWMTERAGGSDVQNTETWATYSPLASSSGSEPLGDGDYLISGFKFFS 232

Query: 236 SSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNAT 286
           S+  ++  ++LA+   G++  FL P  R +  G        NG+   RLKNK+G +   T
Sbjct: 233 SATDANLALLLAKTPSGKLSTFLAPLRRTVVGGDGVSRVVSNGVRIHRLKNKLGTKELPT 292

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            ELE  +    L+G+++     +  +  +  L + + S++G R +++    +A+ R   G
Sbjct: 293 AELELKDMRAHLIGEIDQGIVTIAPLLNVTRLHTFVGSLAGWRRAISITKSFAKARTTVG 352

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS--------------EEAAY 392
             L   P+  R +AD+ +    A  L++     F   + R+              E    
Sbjct: 353 EPLWLIPMHLRLLADMEVKHRGAMNLAWFTVALFGVVEDRTPSSNKIAHLPQPGKEAEVV 412

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSG 447
            R +    K    KMA A I E  E +GG GY++E      +I+R  R +  NSI  G+ 
Sbjct: 413 FRTLTATAKAVISKMATAGIQECQESMGGVGYMDEADEPEFNISRILRNNAVNSIWEGTT 472

Query: 448 NAMVLDVLNLLEKGTNLFEQLFST 471
           N +  + +  L K  NL  ++F T
Sbjct: 473 NVLASEFVRFLIKKDNL--KIFGT 494


>gi|48478531|ref|YP_024237.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48431179|gb|AAT44044.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 537

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 188/435 (43%), Gaps = 40/435 (9%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G+N ++ D  L + I  + +     L  +G Y+ S   ++   + +Y  P L  +G    
Sbjct: 13  GVNYFNDDKTLHS-IMKYLNYHDDALADMGLYISSEMIEDSMFIDHYAKPVLKTWGILDN 71

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             + V      ++++ R +  G+   I D+                   LM    +G+L+
Sbjct: 72  EIEGVWISRDHNSIIERLLDMGVVSRILDKD------------------LMFHFTSGYLI 113

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           S S    ++     T    K ++  +  F   Y   N   +  T        TE +GG+D
Sbjct: 114 SDSGLFCTLTLTGQTVYALKKYSNNLNDFIEHY--RNDHWLGATYY------TEIQGGSD 165

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-----FLVPRLLED 264
           + A  +      D       +K+F S   ++D  I+ A++  + G      F VP L  D
Sbjct: 166 LGANKTVAVSNGDSFILNGENKYFASDAGLADGAIVTARLNNKPGVKGISVFFVPALKPD 225

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GSPN    +RLK+K+G     T E+  +N+ G++LG+ N       ++  +  +D A+ +
Sbjct: 226 GSPN-YNIRRLKDKLGTILVPTGEVILNNSIGYMLGNDNNGIYIALEILEISRIDDALAA 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF---- 380
               R +L E+  Y+  RH  G  +I+ P++ R + ++  ++ A+T LSF  A+ F    
Sbjct: 285 AGIARKALWESYLYSLERHAFGKAIIEHPLIIRDLIEMQSEVDASTVLSFIAADMFSKVT 344

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE     ++   AR    + K      +  V   AME  GG G++ +  + + +R+S   
Sbjct: 345 DEEPPYHDDYHMARAFTHMAKNISSWASDHVTRYAMEIFGGKGFLYDFPVEKFHRDSIVT 404

Query: 441 SILLGSGNAMVLDVL 455
           S+  G+ N   LD L
Sbjct: 405 SLWEGTSNIQALDFL 419


>gi|212543523|ref|XP_002151916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210066823|gb|EEA20916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 611

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 211/516 (40%), Gaps = 75/516 (14%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           HQPS        PP ++   A +   +   L    PS +  EL    E+VLS        
Sbjct: 13  HQPS-------LPPQYLEDRALNR-IISFHLPTPTPSSISNELLQFSEFVLSKPVLGYIA 64

Query: 76  MANYNTPQLHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            +  + P L      GE  R D +     W  L    I +G+    ++RS      +   
Sbjct: 65  DSEKHPPYLKPLTSFGEENRDDPLVTSEGWRRLQEIGIAEGIVALAYERS-----ERWNP 119

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM--------TTPRVHKDWAPKIFSREYDP 185
           +I     Y +    +G +  PS  +     L+         T  V K    ++ SRE   
Sbjct: 120 RIHQFVKYHIWSGSSGIVTCPSAMTDGAAKLLGKHLDDDSETKEVFKSARERLISRE--- 176

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---------------GIYCLSG 230
                    +   G  +TE++GG+D+    +   K+SD               G + + G
Sbjct: 177 ------NGFAWTSGQWMTERKGGSDVRGTETIAVKLSDVQSRDGGLDANGQPLGPWRVDG 230

Query: 231 HKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNR 282
            KWF S+  ++  I+LA+  + ++  F  P  R + + +      NG+  QRLKNK+G +
Sbjct: 231 FKWFSSATDANMTILLAKTGDNQISAFYAPLRRRVANAANGKTELNGIKIQRLKNKLGTK 290

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           +  T E+E      +L+G        +  +  +  + + + SV      LA +  +AR R
Sbjct: 291 ALPTAEIEIKGMRAYLIGKQGQGVKEISHVLNITRMQNIVSSVGAWGRGLAISRAFARVR 350

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393
           +V G +L D P   R +A   +   A   LSF +A     ++  ++ ++ A         
Sbjct: 351 NVGGKLLCDVPAHVRGLAQEHVKYTAHMHLSFFIAALLGRSEGSNDTSSAASSIIPQDIN 410

Query: 394 ------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE----ERSIARHYRESPANSIL 443
                 R++ PI K      A   +   ME +GG GY+E    E +IAR +R++   +I 
Sbjct: 411 RINALYRLLTPIAKAQTALSAINGLRACMESLGGVGYLENEDPELNIARLFRDTNVLAIW 470

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
            G+ + M  D + ++++G +   ++    E+ LG S
Sbjct: 471 EGTTDIMADDFMRVVKRGKD-GAKVLEYFEEWLGES 505


>gi|284163450|ref|YP_003401729.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013105|gb|ADB59056.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 645

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 202/473 (42%), Gaps = 77/473 (16%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           V+  T  + A   + + P+L  Y   GE W++V +        R +   G+       +F
Sbjct: 51  VVGRTIADNADYVDDHGPELEPYDAHGEVWNRVRYPAEQFENDRLAYERGIVAD----AF 106

Query: 125 E-PVVRKQ----AHKIRAARLYLMAQLEAGHLMSPSVTS-ASMVALMTTPRVHKDWAPKI 178
           E P+ R +    AH +  A  YL++  + G     ++T+ A++V          ++   +
Sbjct: 107 EAPLDRDEPMPLAHTL--AMQYLLSYADVGFDCPVAMTAGAALVLEKFDDGSLAEYYEAL 164

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSS 237
            SREYD   +  M          LTEK+GG+D+ A  ++ +     G + LSG KWF S+
Sbjct: 165 TSREYDDLIEGAMF---------LTEKQGGSDVGANETRAEYDPESGYWRLSGEKWFCSN 215

Query: 238 PMSDAFIMLAQV----EGRVGC--FLVPR------------------LLEDG-----SPN 268
             ++  + LA+     EG  G   FLVP                    LEDG     + N
Sbjct: 216 VDAEGTLALARTPDAPEGTAGLSMFLVPHSDPDSDARPADGPYTKGDRLEDGPLEPEAVN 275

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              Y+RLK+K+G  +  T E+EF+    FL+G+       + +M  L  L +A  +   M
Sbjct: 276 DQLYRRLKDKLGTTAVPTGEVEFTGAKAFLVGEEEKGFTQMTEMLNLERLSNAAAACGLM 335

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL---DIAAATALSFRLANSFDEAK- 384
             +  E+  YA  R   G  +   P+M+  + D+ +      A T  + RL +  + A+ 
Sbjct: 336 GRATLESAIYAANREAFGDTIDRYPLMRADLVDMTVAHEAATAFTFEAARLLSERERAER 395

Query: 385 -------------------SRSEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                                S + AY   R++ PI K    +MA    + AME  GG+G
Sbjct: 396 SARSDDAASADGDAASTTADESADEAYRLMRLLTPIAKLRTGRMAVDTASYAMEIHGGNG 455

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           Y+ +    R  R++    I  G+ N + LDVL  LE+  +  E L  T+E  L
Sbjct: 456 YVNDFVTNRLLRDAQVLPIWEGTENVLSLDVLRALER-EDAHEPLLETIEDRL 507


>gi|326477649|gb|EGE01659.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 618

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 198/487 (40%), Gaps = 82/487 (16%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102
           L +  P  + K+       V+S    + A  A  N P L     +G   +R D +     
Sbjct: 35  LPSPLPPSLEKDFTRFSSLVISKPVLDYAADAERNQPYLKPLSTFGTENKR-DPLVTGEG 93

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG---HLMSPSVTSA 159
           W AL   +I +GL          P      H     R     ++  G   HL +PS    
Sbjct: 94  WRALQDINIREGLV------GLAPEPGLTGH-----RTQWNTRVSKGIKTHLWTPSS--- 139

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGG 208
              A++T P    D A K+ SR  D  N         +   +  ++A   G  +TE+ GG
Sbjct: 140 ---AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPAIAWTSGQWMTERSGG 196

Query: 209 TDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIMLAQV-EG 251
           +D+    +  +K++       DG+         + L G KWF S+  ++  IMLA+  E 
Sbjct: 197 SDVRGTETVARKLTPKEMEEDDGVDSTGMPLGPWRLDGFKWFSSATDANMSIMLAKTGED 256

Query: 252 RVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            +  F  P  R ++   P     NG+  QRLKNK G ++  T ELE     G+L+G    
Sbjct: 257 SISAFYAPLRRQVKGKDPQESELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQ 316

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +  +  +    + I SVS    SLA    Y++ R  SG +L D P   R +A   +
Sbjct: 317 GVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLRDTPSYVRTLARDHV 376

Query: 365 DIAAATALSFRL-----------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
             AA+  L+F +                 A      + ++   A  R++ P+ K      
Sbjct: 377 KYAASMHLTFFVVVLLGISEGSNCCSCMAAQINILPRDKNHTLALLRLLTPMAKARTALR 436

Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE--KG 461
           A   +  +ME +GG GY+E      +IAR +R++   SI  G+   M  DV+ +++  KG
Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDVMRVVKGSKG 496

Query: 462 TNLFEQL 468
            +    L
Sbjct: 497 PDCLNAL 503


>gi|169598071|ref|XP_001792459.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15]
 gi|111070363|gb|EAT91483.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15]
          Length = 666

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 187/433 (43%), Gaps = 82/433 (18%)

Query: 177 KIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD------------ 223
           K+F+  Y+  T++ P    +   G  +TE+ GG+D++   +   ++S             
Sbjct: 192 KVFTEAYERLTSRDP--NFAWTSGQWMTERAGGSDVSGTETFAHRVSKEYLEQEKKAGRG 249

Query: 224 --------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSP----- 267
                   G + + G KWF S+  S+  ++LA+  +G +  F +P  R   +G+      
Sbjct: 250 SDAVGMPLGPWKIDGFKWFSSATDSEMAVLLARTSKGGLSAFYIPMRRRAGEGASATNEQ 309

Query: 268 -------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                  NG+  QRLKNK+G +S  T ELE +   G+L+G        +  +  +  L +
Sbjct: 310 APPPTELNGIRIQRLKNKLGTKSLPTAELELNGARGWLIGTEGQGVKDISAILNITRLST 369

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------ 374
              SV+     LA    Y++ R V GG+L D P   + +AD  +   AA   +F      
Sbjct: 370 GAGSVASWSRGLAICRAYSKVRKVRGGLLQDNPAHLKWMADETVKYWAAAHFAFLGVALQ 429

Query: 375 -RLANSFDE-----------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             L   +D+            + ++  AA  R++ P+ K      +   + + MEC+GG 
Sbjct: 430 GSLEQDWDKMVANTRAANLIPRDKAHVAALLRLILPVMKAQVTVASVHGLRQCMECLGGI 489

Query: 423 GYIEER------SIARHYRESPANSILLGSGNAMVLDVLN-LLEK---GTNLFEQLFSTL 472
           GY E        +IA+ YR++  N I  G+ + M  DV+  LL+K     N+   +F+  
Sbjct: 490 GYCENNEDGGLLNIAKIYRDNLVNPIWEGTVSVMAEDVVRVLLDKRLGDGNVLTSIFAPW 549

Query: 473 EQDL-----------GSSGKKVITILRDSISLCKEDKGLAR---FLTEKIALASSAAALY 518
            +D+             S ++ + +L D +   ++D+ L R    L     + SS   LY
Sbjct: 550 VRDVLQHCGFIFATQAESIRRRLQVLIDVVQGARKDELLYRGRESLDHIEVIVSSTTLLY 609

Query: 519 RAGMNDIADVFLE 531
            A ++   D F E
Sbjct: 610 DATVS--PDPFAE 620


>gi|302502975|ref|XP_003013448.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371]
 gi|291177012|gb|EFE32808.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371]
          Length = 618

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 197/494 (39%), Gaps = 96/494 (19%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  P  + K+L      V+S    + A  A  N P L      G   + D +     W
Sbjct: 35  LPSPLPPSLEKDLTRFSSLVISKPVLDFAAEAERNQPYLKPLSTFGIENKQDPLVTGEGW 94

Query: 104 HALLRRSIHDGL-----------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            AL   +I +GL           H + W+      ++                    HL 
Sbjct: 95  RALQDINIREGLVGLAPEPGLTGHGTQWNTRVSKGIKS-------------------HLW 135

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLG 201
           +PS       A++T P    D A K+ SR  D  N         +   +  S+A   G  
Sbjct: 136 TPSS------AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPSIAWTSGQW 189

Query: 202 LTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIM 245
           +TE+ GG+D+    +  +K++       DG+         + L G KWF S+  ++  IM
Sbjct: 190 MTERSGGSDVRGTETVARKLTPKEMEEDDGVDSEGMPLGPWRLDGFKWFSSATDANMSIM 249

Query: 246 LAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           LA+  E  +  F  P  R ++   P     NG+  QRLKNK G ++  T ELE     G+
Sbjct: 250 LAKTGEHSISAFYAPLRRQVKGKDPRESELNGVRIQRLKNKFGTKALPTAELEIKGMRGY 309

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G        +  +  +    + I SVS    SLA    Y++ R  SG +L D P   R
Sbjct: 310 LVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTPSYVR 369

Query: 358 AIADIALDIAAATALSFRLANSFDEA-----------------KSRSEEAAYARIMAPIT 400
            +A   +  AA+  L+F +      +                 +  +   A  R++ P+ 
Sbjct: 370 TLARDHVKYAASMHLTFFIVALLGVSEGSSSSSCMASQTNILPRDNNHTLALLRLLTPMA 429

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLN 456
           K      A   +  +ME +GG GY+E      +I+R +R++   SI  G+   M  D++ 
Sbjct: 430 KARTALRAIKGVRASMENLGGIGYLENEDPILNISRIFRDTCVLSIWEGTTEVMADDLMR 489

Query: 457 LLE--KGTNLFEQL 468
           +++  KG +  + L
Sbjct: 490 VVKGSKGPDCLDAL 503


>gi|326473184|gb|EGD97193.1| hypothetical protein TESG_04607 [Trichophyton tonsurans CBS 112818]
          Length = 618

 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 198/487 (40%), Gaps = 82/487 (16%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102
           L +  P  + K+       V+S    + A  A  N P L     +G   +R D +     
Sbjct: 35  LPSPLPPSLEKDFIRFSSLVISKPVLDYAADAERNQPYLKPLSTFGTENKR-DPLVTGEG 93

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG---HLMSPSVTSA 159
           W AL   +I +GL          P      H     R     ++  G   HL +PS    
Sbjct: 94  WRALQDINIREGLV------GLAPEPGLTGH-----RTQWNTRVSKGIKTHLWTPSS--- 139

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGG 208
              A++T P    D A K+ SR  D  N         +   +  ++A   G  +TE+ GG
Sbjct: 140 ---AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPAIAWTSGQWMTERSGG 196

Query: 209 TDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIMLAQV-EG 251
           +D+    +  +K++       DG+         + L G KWF S+  ++  IMLA+  E 
Sbjct: 197 SDVRGTETVARKLTPKEMEEDDGVDSTGMPLGPWRLDGFKWFSSATDANMSIMLAKTGED 256

Query: 252 RVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            +  F  P  R ++   P     NG+  QRLKNK G ++  T ELE     G+L+G    
Sbjct: 257 SISAFYAPLRRQVKGKDPQESELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQ 316

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +  +  +    + I SVS    SLA    Y++ R  SG +L D P   R +A   +
Sbjct: 317 GVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLRDTPSYVRTLARDHV 376

Query: 365 DIAAATALSFRLAN--SFDEA---------------KSRSEEAAYARIMAPITKYWCCKM 407
             AA+  L+F +       E                + ++   A  R++ P+ K      
Sbjct: 377 KYAASMHLTFFVVALLGISEGSNCCSCMAAQINILPRDKNHTLALLRLLTPMAKARTALR 436

Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE--KG 461
           A   +  +ME +GG GY+E      +IAR +R++   SI  G+   M  DV+ +++  KG
Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDVMRVVKGSKG 496

Query: 462 TNLFEQL 468
            +    L
Sbjct: 497 PDCLNAL 503


>gi|303323515|ref|XP_003071749.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111451|gb|EER29604.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 614

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 208/506 (41%), Gaps = 80/506 (15%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q P  I   +   DS+   +++       P  ++++L      VLS   Q
Sbjct: 2   EPSSSTAGFFQSPPVI-PPSIEDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P +      G   + D +     W  L    I +G+  S ++++      
Sbjct: 61  SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKA------ 114

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-- 187
                +   R+Y   +     L  PS       A++T P    D A  +  R  D  N  
Sbjct: 115 -SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAACLLGRHLDGENGE 164

Query: 188 -------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS-------DGI------ 225
                  +   +  S+A   G  +TE++GG+D+    +  +K+S       DG+      
Sbjct: 165 IFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMP 224

Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQR 274
              + + G KWF S+  ++  I+LA+   +G V  F  P  R +  G+     NG+  QR
Sbjct: 225 LGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQR 284

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           LKNK+G +   T ELE      +L+G        +  +  +  L +AI +VS     LA 
Sbjct: 285 LKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAI 344

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----SFDEAKSRSEEA 390
           +  YA+ R V   +L+D P   R +A   +  AA T L+F +A     S  +   R+  A
Sbjct: 345 SKAYAKVRAVRNTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAA 404

Query: 391 -------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARH 433
                        A  R++ P+ K      A   +   ME +GG GY+E      +IAR 
Sbjct: 405 QANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARI 464

Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459
           +R++   SI  G+ + M  DV+ +++
Sbjct: 465 FRDACVLSIWEGTTDIMADDVVRVVK 490


>gi|320035110|gb|EFW17052.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 614

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 208/506 (41%), Gaps = 80/506 (15%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q P  I   +   DS+   +++       P  ++++L      VLS   Q
Sbjct: 2   EPSSSTAGFFQSPPVI-PPSIEDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P +      G   + D +     W  L    I +G+  S ++++      
Sbjct: 61  SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKA------ 114

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-- 187
                +   R+Y   +     L  PS       A++T P    D A  +  R  D  N  
Sbjct: 115 -SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAACLLGRHLDGENGE 164

Query: 188 -------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS-------DGI------ 225
                  +   +  S+A   G  +TE++GG+D+    +  +K+S       DG+      
Sbjct: 165 IFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMP 224

Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQR 274
              + + G KWF S+  ++  I+LA+   +G V  F  P  R +  G+     NG+  QR
Sbjct: 225 LGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQR 284

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           LKNK+G +   T ELE      +L+G        +  +  +  L +AI +VS     LA 
Sbjct: 285 LKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAI 344

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----SFDEAKSRSEEA 390
           +  YA+ R V   +L+D P   R +A   +  AA T L+F +A     S  +   R+  A
Sbjct: 345 SKAYAKVRAVRNTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAA 404

Query: 391 -------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARH 433
                        A  R++ P+ K      A   +   ME +GG GY+E      +IAR 
Sbjct: 405 QANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARI 464

Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459
           +R++   SI  G+ + M  DV+ +++
Sbjct: 465 FRDACVLSIWEGTTDIMADDVVRVVK 490


>gi|296810944|ref|XP_002845810.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238843198|gb|EEQ32860.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 619

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 198/474 (41%), Gaps = 76/474 (16%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102
           L +  P  + ++L    + VLS T  E A  A  N P L     +G   +R D +     
Sbjct: 35  LPSPLPQSMEQDLTRFSKLVLSRTTLEYAAEAERNQPYLRPLTTFGVENKR-DSLVTSEG 93

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASM 161
           W AL   +I +GL          P     +H I+   R++   +    HL +PS      
Sbjct: 94  WRALQDINIKEGLV------GLSPEPTHTSHSIQWNNRVFKGIKT---HLWTPSS----- 139

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTD 210
            A++T P    D A  + S+  D  N         +   +  ++A   G  +TE++GG+D
Sbjct: 140 -AMVTCPGSMTDGAASLLSKHLDDENGRIFAEALRRLVSRDPAIAWTSGQWMTERKGGSD 198

Query: 211 IAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
           +    +  +K++                 G + L G KWF S+  ++  IMLA+  E  +
Sbjct: 199 VRGTETVARKLTAQEMAEDNGVDSAGMPLGPWRLDGFKWFSSATDANMSIMLAKTGENSI 258

Query: 254 GCFLVP-------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             F  P       +  E+   NG+  QRLKNK G ++  T ELE     G+L+G      
Sbjct: 259 SAFYAPLRRRAKGKDYEETELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQGV 318

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +  +    ++I +VS    SLA    Y++ R  +G  L   P   R +A   +  
Sbjct: 319 KEISTILNITRTGNSIAAVSYWGRSLAICRAYSKVRITNGRSLQATPSYVRTLAKDHVKY 378

Query: 367 AAATALSFRL------------ANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAP 409
           AA+  L+F +            A+S         K +S   A  R++ P+ K      A 
Sbjct: 379 AASMHLAFFIVALLGISEGGSSASSMAAQVHIFPKDKSHSLALLRLLTPMAKARTALRAI 438

Query: 410 AVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             +  +ME +GG GY+E      ++AR +R++   SI  G+   M  D++ +++
Sbjct: 439 KGVRASMENLGGIGYLENEDPMLNVARIFRDTCVLSIWEGTTEVMADDLMRVVK 492


>gi|119188865|ref|XP_001245039.1| hypothetical protein CIMG_04480 [Coccidioides immitis RS]
          Length = 628

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 213/519 (41%), Gaps = 82/519 (15%)

Query: 6   IYRRLAMNQVH--QPSDSLFALNQPPLFIGMNAYSSDSLL-----VALIANFPSVVHKEL 58
           + + L   +VH  +PS S     Q P  I   +   D +      + L +  P  ++++L
Sbjct: 3   VAKHLTHFEVHGMEPSSSTAGFFQGPPVI-PPSIEDDGIFRRVVSLHLPSPIPQHLYQDL 61

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLH 116
                 VLS   Q     A  N P +      G   + D +     W  L    I +G+ 
Sbjct: 62  TQFSNLVLSKPIQSHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIV 121

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            S ++++           +   R+Y   +     L  PS       A++T P    D A 
Sbjct: 122 ASGYEKA-------SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAA 165

Query: 177 KIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS--- 222
            +  R  D  N         +   +  S+A   G  +TE++GG+D+    +  +K+S   
Sbjct: 166 CLLGRHLDGENGEIFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAE 225

Query: 223 ----DGI---------YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDG 265
               DG+         + + G KWF S+  ++  I+LA+   +G V  F  P  R +  G
Sbjct: 226 KLETDGVDAHGMPLGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGG 285

Query: 266 SP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           +     NG+  QRLKNK+G +   T ELE      +L+G        +  +  +  L +A
Sbjct: 286 NSETELNGIRIQRLKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNA 345

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--- 378
           I +VS     LA +  YA+ R V   +L+D P   R +A   +  AA T L+F +A    
Sbjct: 346 IAAVSYWGRGLAISKAYAKVRAVRNTMLMDMPAHVRKLAQDHVKYAANTHLTFLVAALLG 405

Query: 379 -SFDEAKSRSEEA-------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            S  +   R+  A             A  R++ P+ K      A   +   ME +GG GY
Sbjct: 406 VSEGQESGRTPAAQANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGY 465

Query: 425 IEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +E      +IAR +R++   SI  G+ + M  DV+ +++
Sbjct: 466 LENEDPLFNIARIFRDACVLSIWEGTTDIMADDVVRVVK 504


>gi|327439047|dbj|BAK15412.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 550

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 197/424 (46%), Gaps = 42/424 (9%)

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ YL++Q E G     ++T       M T  + + +A +   +++ P   A        
Sbjct: 120 AQGYLLSQTEPGFYCPVTLT-------MATAYLLEHYASEELKQKFMPHICATGDTELFE 172

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-----EG 251
               LTE++GG+D+ A   +  ++  G + L G K+F S+  M    ++LA+      +G
Sbjct: 173 GATFLTERQGGSDVGANVVEA-RLDQGEWRLYGEKYFASNAGMCGVAMVLARQTTNSKQG 231

Query: 252 RVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             G   F VP   ++G  N +  +RLK+K+G ++  + E+EF+    +++GD +     +
Sbjct: 232 SKGLTLFAVPWREDNGELNHITIRRLKDKLGVKAVPSGEVEFNGAKAYVVGDPSKGIYYM 291

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +   L  + +A  SV  M+ +L EA+HY   R   G  + + P+++ ++  +     A+
Sbjct: 292 LEALNLSRICNAAASVGIMKRALDEAVHYTNGRIAFGQKVAEFPMVQHSLGALHAKWHAS 351

Query: 370 TALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               F L + +DE     +  +E    R++  + K    + A     EA+E  GG+GYIE
Sbjct: 352 LVALFDLVSRYDEVIGGNASEDEQQIVRLLIALVKKESAEWAIEFTHEAIELHGGNGYIE 411

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-------------FEQLFSTLE 473
           +  + R  R++   ++  G+ N +  +++ L++K  ++              +QL S +E
Sbjct: 412 DFVLPRLLRDAQVLTVWEGTANILAHELIRLVQKNAHITLLHELQQTSHPYLQQLASVVE 471

Query: 474 QDLGSSGKKVITILRDSISLCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           Q        V   L  ++   +     + LAR     +A+  + +A  R  M  +A++++
Sbjct: 472 QRFA-----VFVTLDPAMQTLEAKPLMQQLARLYEAVVAVKHAESAGEREQM--LAEIYI 524

Query: 531 ENRF 534
           E +F
Sbjct: 525 EEQF 528


>gi|183219648|ref|YP_001837644.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909786|ref|YP_001961341.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774462|gb|ABZ92763.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778070|gb|ABZ96368.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 571

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 57/471 (12%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV---HK--ELELLGEY------V 65
            PS   F +++     G N Y  D  L  ++  +       HK   +E + EY      +
Sbjct: 8   HPSLQPFDISEYKGLRGKNFYDMDPALQRMVDRYSESFDPKHKLAMVEHIREYGELVGGI 67

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWD 121
           L    +E  +   Y   ++  Y   G+R D +++        + S   G+        W+
Sbjct: 68  LDELTEECHKEGKYG--EVVKYDRTGKRIDFIKYSDEQKRARKISYDHGVVNLDFHREWN 125

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL--MTTPRVHKDWAPKI 178
             F        H  R A  YLM     G +  P ++T   ++AL  + T    K + P +
Sbjct: 126 YEF-------THIHRYALTYLMNLNGEGGVACPLAMTDGMILALKKIGTEEQKKKYLPLV 178

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
             +  D         +    G  +TE+ GG++++A  +  +K+ +G + L+G KWF S+P
Sbjct: 179 AGKGSD---------SHFMAGQYVTERVGGSNVSANRTIAKKLPNGKWELTGEKWFCSNP 229

Query: 239 MSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             D ++  A++EG   VG FLVPR+ E+G  NG    R K+ IG+R   TVE+ +     
Sbjct: 230 -GDLWVTTAKMEGTNTVGMFLVPRIKENGELNGQHILRKKDIIGSRGKITVEIIYDKVEA 288

Query: 297 FLLGDLNVSTGPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              G      G V  ++ +I    L   + S    R S+ EA  YA+ R   G  +++ P
Sbjct: 289 EEFG--RPGHGLVNLIRYIIKTSRLHVGLGSCGNARRSVMEASEYAKFRTAYGKKILEFP 346

Query: 354 VMKRAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + +A++ +   A   ++FR   LA   D+A         A I  P+ KY     A  
Sbjct: 347 SFVKTLAEMQILQTANCFVNFRSVGLAEKGDDA---------AEITVPLLKYKSSSQASY 397

Query: 411 VIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +A+  +GG+G I + S + R + +S  N    G+   +    L+ L+K
Sbjct: 398 ITQKAILTLGGNGIIGDFSPLPRLHNDSIINETWEGTHLIITDHCLHALQK 448


>gi|327296357|ref|XP_003232873.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892]
 gi|326465184|gb|EGD90637.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892]
          Length = 641

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 193/483 (39%), Gaps = 94/483 (19%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  P  + K+       V+S    + A  A  N P L      G   + D +     W
Sbjct: 58  LPSPLPPNLEKDFTRFSSLVISKPVLDYAAEAERNQPYLKPLSTFGIENKQDPLVTGEGW 117

Query: 104 HALLRRSIHDGL-----------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            ALL  SI + L           H + W+      ++                    HL 
Sbjct: 118 RALLEISIRESLVGLAPEPGLTGHGTQWNTRVSKGIKT-------------------HLW 158

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-----KAPMQKTSV------AIGLG 201
           +PS       A++T P    D A K+ SR  D  N     +A  + TS         G  
Sbjct: 159 TPSS------AMVTCPGSMTDGAAKLLSRHLDSKNGRIFAEALKRLTSCDPAIAWTSGQW 212

Query: 202 LTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIM 245
           +TE+ GG+D+    +  +K++       DG+         + L G KWF S+  ++  I+
Sbjct: 213 MTERSGGSDVRGTETVARKLTPEEMEEDDGVDSVGMPLGPWRLDGFKWFSSATDANMSII 272

Query: 246 LAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           LA+  E  +  F  P  R ++  +P     NG+  QRLK K G ++  T ELE     G+
Sbjct: 273 LAKTGEHSISAFYAPLRRQVKGRNPRESELNGVRIQRLKIKFGTKALPTAELEIKGMRGY 332

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G        +  +  +    + I SVS    SLA    Y++ R  SG +L D P   R
Sbjct: 333 LVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTPSYVR 392

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----------------RIMAPIT 400
            +A   +  AA+  L+F +      ++ RS  +  A                 R++ P+ 
Sbjct: 393 TLARDHVKYAASMHLTFFIVALLGISEGRSSSSCMAAQTNILPRDKNSTLALLRLLTPMA 452

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLN 456
           K      A   +  +ME +GG GY+E      +IAR +R++   SI  G+   M  D++ 
Sbjct: 453 KARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDLMR 512

Query: 457 LLE 459
           +++
Sbjct: 513 VVK 515


>gi|297183600|gb|ADI19727.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 587

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 152/325 (46%), Gaps = 40/325 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR------ 252
           LTE   GTD+  + ++  + SDG Y LSG K F++S    +++  I L            
Sbjct: 164 LTEPVCGTDLGLLKTKAVEQSDGTYKLSGQKIFITSGDHDLTENIIHLVIARSSDSPPGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DGS    NG+    +++K+G + +AT  L F +  G+++G  N  
Sbjct: 224 KGISLFLVPKFLVKDDGSIGSRNGVSTGSIESKMGIKGSATCVLNFDDAIGYMIGPKNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHV----------SGGILIDQ 352
              +  M  ++ L+  ++ + G+ +S      A+ Y++ R            +   +I+ 
Sbjct: 284 ---LNSMFTMMNLERIVVGIQGLGISEIAYQNALSYSKERKQGQSNNSKSTNAADYIIEH 340

Query: 353 PVMKRAIADIALDIAAATALSFRLAN------SFDEAKSRSEEAAYARIMAPITKYWCCK 406
             ++R++ ++   I    AL F L+       + ++ K R E + +  +M P+ K     
Sbjct: 341 ADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHNDEKVRQEASDFVSLMTPVVKSMFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
           M   + +EAM+  GG GY +++ I + YR++    I  G+ +    D++   L+ K  ++
Sbjct: 401 MGMEITSEAMQIYGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLVNKNGDI 460

Query: 465 FEQLFSTLEQDLGSSGKKVITILRD 489
             +    ++ D  +  +K    +++
Sbjct: 461 INKYLDMIKNDCNTENEKTKPFIKE 485


>gi|209964932|ref|YP_002297847.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958398|gb|ACI99034.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 598

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 59/340 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE + G+D+ A+ S+     DG Y ++G K F++    D       ++LA+      
Sbjct: 162 MNLTEPQAGSDVGAVRSRAVPAGDGTYRITGQKIFITYGEHDFTSNIIHMVLARTPDAPP 221

Query: 249 -VEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L   DGSP   N L    L++K+G  ++ T  + F +     GFL+
Sbjct: 222 GVKG-ISLFIVPKFLVNPDGSPGARNDLRCAGLEHKLGIHASPTAVMAFGDNGGATGFLI 280

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI------ 348
           G+ N     +E M     +++A + V    V +AE     A  YA+ R  S  +      
Sbjct: 281 GEENRG---IEYM--FTMMNNARLGVGVQGVGIAERAYQQARDYAKTRVQSRALTGRDPG 335

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPI 399
              +I+ P ++R +      I AA ALS+  A++FD AK       R    A   ++ PI
Sbjct: 336 PVAIINHPDVRRMLLTAKSQIEAARALSYLTASAFDRAKRHPDAEERRRAKALNDLLTPI 395

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           TK WC  +     +  ++  GG G+IEE   A+H R++    I  G+      D+     
Sbjct: 396 TKAWCTDLGVESASLGVQVHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQANDL----- 450

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                   +F  + +D G +  +++  +RD+ +  K+  G
Sbjct: 451 --------VFRKVARDGGETALRLLAEIRDTAAAAKDRPG 482


>gi|126734643|ref|ZP_01750389.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126715198|gb|EBA12063.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 568

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 163/350 (46%), Gaps = 41/350 (11%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +SP +T   + AL    +  + + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LSPLMTQGQIEALEHHASDAIKELYIPKMISGEWSGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VEGRVGC--FLV 258
           D+ A+ S+ +   DG Y ++G K ++S   +D       ++LA+    V G  G   F+V
Sbjct: 171 DVGALRSKAEPNGDGTYAITGQKIYISWADNDFTQNVCHLVLARLPDGVPGTKGISLFMV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+L+ D     G+ N L    L++K+G   + T  +E++   G+L+G  +     +  M 
Sbjct: 231 PKLIPDADGNPGAKNDLRVVSLEHKMGLHGSPTAVMEYAGAKGWLVGREHGGMAAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG--GILIDQPVMKRAIADIALDIAA 368
               L   +  V     +L  A+ YA+ R     SG  G +ID   ++R +  +  D  A
Sbjct: 291 NNARLGVGVQGVGAAEGALQHALAYAKDRKQGKTSGITGTIIDHADVRRMLTTMKADTYA 350

Query: 369 ATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A A++   A + D A +  +E   AR   + PI+K +   +   V A  ++  GG G++E
Sbjct: 351 ARAITLMNAVAIDMAHASGDEGWKARAAFLTPISKAFGSDVGCEVSATGIQVHGGMGFVE 410

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474
           E   A++ R+    +I  G+     +D++   L++ G   F ++   +EQ
Sbjct: 411 ETGAAQYARDVRVTTIYEGTNGIQAMDLVARKLMDGGEAAF-RILEEIEQ 459


>gi|320450348|ref|YP_004202444.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus
           SA-01]
 gi|320150517|gb|ADW21895.1| acyl-CoA dehydrogenase, short-chain specific [Thermus scotoductus
           SA-01]
          Length = 515

 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 197/448 (43%), Gaps = 55/448 (12%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTP-QLHA 86
           G + Y  DS L A++  F P +  +EL    +L+GE VL     E+A   + + P +L  
Sbjct: 9   GEDHYKLDSDLKAILDTFAPGLPQEELSAFGKLVGEEVL-----EVAHHVDQDAPPRLQM 63

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +   G+R D+    PA   LL +     L   I      P    +   +  A  YL+A  
Sbjct: 64  HDLDGKRIDRALLSPAQKILLEK-----LRPMI-----RPAYEGRGWPLHYAFGYLLA-- 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LT 203
           + G     ++T     AL      HK          Y P ++   ++       G   +T
Sbjct: 112 DGGLYCILTITHQVAYAL------HK----------YAPEHEGVKRELLYGPAFGATWMT 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256
           E +GG+D+ A  +  ++  +      G K+F S + ++D  I+ A+ EG       +G F
Sbjct: 156 EIQGGSDLGANRTVARQEGNAYRLYQGDKYFASGAGLADYAIVTARPEGAPAGPKGLGLF 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR +E G  N    +R K K+  R+  + E+E   +  + +G L        +   + 
Sbjct: 216 LLPREVE-GRLN-FTVRRFKEKLATRAVPSGEVELEGSLAYPIGRLEEGIYYTLENLTVS 273

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L +A  ++   + +  EA+   RRR   G  L+   +++  + ++ L     TAL F  
Sbjct: 274 RLANAAAAMGIAKKAHLEALFRVRRRTAFGKTLLQHDLIQHDLLEMRLRQVGGTALGFLA 333

Query: 377 ANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +FD+A       SE    AR+++ + K    + A A+ A AME  GG G++EE  +AR
Sbjct: 334 IQAFDQAWEERPPYSEGYHLARLLSHLAKGRTAEHASAITALAMELFGGLGFLEEYGVAR 393

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            +RE+    I  G  N   LD+L  + K
Sbjct: 394 WHREALITPIWEGPANIQALDMLEAILK 421


>gi|225677980|gb|EEH16264.1| hypothetical protein PABG_06351 [Paracoccidioides brasiliensis
           Pb03]
          Length = 618

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 46/307 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDA 242
           G  +TE++GG+D+    + G+K+S                 G + L G KWF S+  ++ 
Sbjct: 187 GQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNPLGPWQLDGFKWFSSATDANM 246

Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293
            IMLA+   +G++  F  P  R +  G+      NG+  QRLKNK+G ++  T ELE   
Sbjct: 247 TIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKG 306

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G+L+G        +  +  +    + I +V G   +LA +  YAR R   G +L D P
Sbjct: 307 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 366

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396
              RA+A   +   A   L+F +A+    ++ +                  + +A  R++
Sbjct: 367 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLATRASILPTDAQQASALLRLL 426

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452
            P+ K      A   +   ME +GG GY+E      ++AR +R++   SI  G+ + M  
Sbjct: 427 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVARIFRDTCVVSIWEGTTDIMAD 486

Query: 453 DVLNLLE 459
           D++ +++
Sbjct: 487 DLVRVIK 493


>gi|242213407|ref|XP_002472532.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728423|gb|EED82318.1| predicted protein [Postia placenta Mad-698-R]
          Length = 495

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 184/451 (40%), Gaps = 64/451 (14%)

Query: 27  QPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELEL----LGEYV---LSCTAQELARMAN 78
           QP  F+  + Y++D  L  L+   FP  V +++E      G+ V   +S  +Q +     
Sbjct: 8   QPASFVEGHPYTTDPALPGLLKRLFPPTVLQDVEADLIHFGDIVETRMSVLSQLV----- 62

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L  Y   G+R D+++    W  L      +G+    ++R      R  AH     
Sbjct: 63  -EPPRLVQYNQWGQRVDELQTSEGWRGLKALFHEEGIVGIFYERRNREFSR--AHGFAKI 119

Query: 139 RL-----YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            L      ++  +  GH++       S +        H  W               P Q+
Sbjct: 120 LLAIGDSQVVCDIANGHIIRNDKNDTSYINQFKLSNEHDRWL-------------CPGQQ 166

Query: 194 TSVAIGLGLTEKRGGT--DIAAITSQ--GQKISDGIYCLSGHKWFLSSPMSDAFIMLA-- 247
            +    + LTE       + A+ T    GQK     Y L   KWF S+  S+  + LA  
Sbjct: 167 RAGGSDVSLTETLASPVPETASTTPSHYGQK-----YTLDRFKWFSSATDSNFALALART 221

Query: 248 --QVEGR--VGCFLVPRLL----EDGSP------NGLCYQRLKNKIGNRSNATVELEFSN 293
             Q +G   +  FLVP  L    E G+P      N +   RLKNK+G ++  T EL    
Sbjct: 222 GSQADGSRALSLFLVPLRLPMFREPGAPRPPSTSNNVFVHRLKNKVGTQALPTAELSLEG 281

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILID 351
             G+L+G+       +  +  +  L SA  SV  +R  LA    Y+R R + GG  +L D
Sbjct: 282 AEGYLIGEPGQGVKLITPVLNITRLHSATTSVGSLRRCLAIVTAYSRVRAIKGGAQLLKD 341

Query: 352 QPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
            P+    +A +++   A   + F    L    +   +  EEA   R++ P  K +  + A
Sbjct: 342 TPLHVAELAKVSVLYRALVHMLFGTISLLGKTECGVAHEEEALRLRLLTPAIKAFAAEKA 401

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              + E M  +GG+GY+ E  I R  ++S A
Sbjct: 402 CTAMEECMAALGGAGYMSENEIGRAVKKSTA 432


>gi|296411298|ref|XP_002835370.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629149|emb|CAZ79527.1| unnamed protein product [Tuber melanosporum]
          Length = 685

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 220/522 (42%), Gaps = 73/522 (13%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +HKEL+ L    LS         A  + P L ++     R D +     W  L     H 
Sbjct: 79  LHKELDSLAVAALSPQVLHWVEDAEAHPPTLESHDAFANRSDTLRTSEGWRRLAELGAHQ 138

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLM----------AQLEAGHLMSPSVTSASMVA 163
           G+    ++  +  + +   + I +    L           A+L + H+  P+ +  S  +
Sbjct: 139 GIVAEGYEGRYGRIGQFAKYYIFSPSSALTTCPFAMTDGAARLLSQHIPHPATSIQSFFS 198

Query: 164 LMTTPRVHKDWAPK---IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-----AIT 215
           L  +    ++   K    ++  +   ++   Q      G  +TE+ GG+D++     A+ 
Sbjct: 199 LNCSLSSRREAEAKRQVFYNAHFRLISRD--QSARWTSGQWMTERSGGSDVSRSETVAVY 256

Query: 216 SQ---GQKISDGI-----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG---CFLVPRLLED 264
           S      +I DG      + + G+K+F S+  +D  I+LA+  G  G    F  P  L +
Sbjct: 257 SPLAPSSQIEDGTEELGPWVIDGYKFFSSATDADMTILLARTPGGGGKPSAFYAPMRLAN 316

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  NG+   RLK K+G R+  T ELE      +++G+       +  +  +  + +A+ +
Sbjct: 317 GERNGVRIMRLKRKLGTRALPTAELELKGMRAWMIGEEGEGIKQIATVLNITRVHNAVSA 376

Query: 325 VSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSF------RLA 377
           +S MR  LA A  +++ R V+    L   P+  R +A + L   A T L+F       L+
Sbjct: 377 ISFMRRGLAIAKAFSKVRVVARNRPLWTIPLHLRTLAHLELYQRATTHLAFFTIHLLSLS 436

Query: 378 NSFDEAKSRSEEAAYA-----------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +     + S  A+             R++ PI K    K+A + ++E  E +GG GY E
Sbjct: 437 ETSAAPSTPSPNASSPLHTPSTPHQLLRLLTPIAKALTAKLAMSTLSECAESLGGVGYCE 496

Query: 427 ER---SIARHYRESPANSILLGSGNAMVLDVLNLL---------EKGTNLFEQLFSTLEQ 474
                +IAR  R++   SI  G+ N +V D+++ L         E+G   F +    +E+
Sbjct: 497 NEEPLNIARLLRDAQVLSIWEGTTNVLVTDLISSLKRTSRAGGEEQGWVPFNEF---VEE 553

Query: 475 DLGSSGKKVITIL---------RDSISLCKEDKGLARFLTEK 507
           +LGS      +++         R  ++L +E K   + L  +
Sbjct: 554 NLGSPATATTSLVGEVEAEILERCKVALWEEWKEFEKILETR 595


>gi|226287271|gb|EEH42784.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 618

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 46/307 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDA 242
           G  +TE++GG+D+    + G+K+S                 G + L G KWF S+  ++ 
Sbjct: 187 GQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNPLGPWQLDGFKWFSSATDANM 246

Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293
            IMLA+   +G++  F  P  R +  G+      NG+  QRLKNK+G ++  T ELE   
Sbjct: 247 TIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKG 306

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G+L+G        +  +  +    + I +V G   +LA +  YAR R   G +L D P
Sbjct: 307 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 366

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396
              RA+A   +   A   L+F +A+    ++ +                  + +A  R++
Sbjct: 367 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLATRASILPTDAQQASALLRLL 426

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452
            P+ K      A   +   ME +GG GY+E      ++AR +R++   SI  G+ + M  
Sbjct: 427 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVARIFRDTCVVSIWEGTTDIMAD 486

Query: 453 DVLNLLE 459
           D + +++
Sbjct: 487 DFVRVIK 493


>gi|13475804|ref|NP_107374.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14026563|dbj|BAB53160.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 583

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 69/401 (17%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+   +P + + +  K+ S ++  T             + LTE + G+
Sbjct: 118 LCPLLTDGAIEALLRFGSPEIQQTYLHKLVSGKWTGT-------------MNLTESQAGS 164

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A I ++ ++ ++G Y +SG K F++    D       ++LA+  G       +  FLV
Sbjct: 165 DLALIRTRAERQANGTYQISGTKIFITYGEHDLAENIIHLVLARTPGAPDGVKGISLFLV 224

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+LL     E G+ N L  Q +++K+G R++ T  LEF    GFL+G  N     +E M 
Sbjct: 225 PKLLVGESGEPGAQNSLRCQSIEHKLGVRASPTCMLEFEGATGFLIGRENAG---LEIM- 280

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH----VSGGI-----LIDQPVMKRAI 359
               +++A  +V    V++AE     A+ YA+ R     V G       +I  P ++R +
Sbjct: 281 -FTMMNAARFAVGVQGVAIAERAYQMALSYAKTRMQGRPVDGSAFEAVPIIRHPDVRRML 339

Query: 360 ADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIA 413
           A +        AL+   A   D A+       R+E  A    + P+ K +C +M+    +
Sbjct: 340 AHMRATTEGGRALAAAAAGWQDRAQFAATPELRAEALAIGEFLVPLVKGFCTEMSLQTAS 399

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
             ++  GG G+IEE  +A++YR++    I  G+      D+L               TL 
Sbjct: 400 TGVQIFGGMGFIEETGVAQYYRDARILPIYEGTTAIQANDLLGR------------KTL- 446

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           +D GS+ +++  ++  + +  ++   LA+ +  +++ A  A
Sbjct: 447 RDGGSTARRLAAMITQTETALRQGSPLAQEIAAQLSCARQA 487


>gi|145537093|ref|XP_001454263.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422018|emb|CAK86866.1| unnamed protein product [Paramecium tetraurelia]
          Length = 599

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 16/276 (5%)

Query: 199 GLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRV-- 253
           G  +TEK GG+D+  + T+         Y L G+KWF S+  S+  + LA+V  E ++  
Sbjct: 187 GQWMTEKDGGSDVNNSTTTIAVHQGGNKYKLYGYKWFSSATDSEMTLALARVVPEKKIED 246

Query: 254 ------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                   F++    +DG+ N +    +K+K+G R   T EL    +  +L+ +      
Sbjct: 247 FRKYPLSLFIMRVKKDDGTLNNIKIMTMKDKMGTRQLPTAELLLQGSEAYLISEEGKGVK 306

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  +  L +A  +V  M    +  ++Y+ +R   G  LI++P  +  +    L++ 
Sbjct: 307 GISQMLNVTRLYNASSAVGSMNRLYSIVVNYSLKRKAFGKELIEKPAHQTMLTKFNLNVR 366

Query: 368 AATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           A +   F++A  F    + A ++ +E  + RI+ P+ K +  K+    ++E +E +G  G
Sbjct: 367 ACSLFYFKVAQLFSKIQNNAATKDDEEMF-RILTPLLKLYTAKICMYWMSEGIEALGALG 425

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           Y+E   I    R++   +I  G+ N + LD L  L+
Sbjct: 426 YMENSYIPLMLRDAQVLTIWEGTTNVLCLDFLRALK 461


>gi|295663895|ref|XP_002792500.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226279170|gb|EEH34736.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 628

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 46/307 (14%)

Query: 199 GLGLTEKRGGTDIAA-------ITSQGQKISDGI---------YCLSGHKWFLSSPMSDA 242
           G  +TE++GG+D+          +++ Q  SDG+         + L G KWF S+  ++ 
Sbjct: 193 GQWMTERKGGSDVRGTETVARKFSAEEQSASDGVDSLGNPLGPWQLDGFKWFSSATDANM 252

Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293
            IMLA+   +G++  F  P  R +  G+      NG+  QRLKNK+G ++  T ELE   
Sbjct: 253 TIMLAKTGPDGQISAFYAPLRRKVPGGTEGETELNGVRIQRLKNKLGTKTLPTAELELKG 312

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G+L+G        +  +  +    + I +V G   +LA +  YAR R   G +L D P
Sbjct: 313 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 372

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396
              RA+A   +   A   L+F +A+    ++ +                  + +A  R++
Sbjct: 373 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSRLTLATRASILPTDAQQASALLRLL 432

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452
            P+ K      A   +   ME +GG GY+E      ++AR +R++   SI  G+ + M  
Sbjct: 433 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDPLFNVARIFRDTCVVSIWEGTTDIMAD 492

Query: 453 DVLNLLE 459
           D + +++
Sbjct: 493 DFVRVIK 499


>gi|83949836|ref|ZP_00958569.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83837735|gb|EAP77031.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 591

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 182/433 (42%), Gaps = 68/433 (15%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS + +  T +    + PK+FS ++  T             + LTE   GTD+  + S+
Sbjct: 132 AASAILVHGTDQQKDTYLPKMFSCDWTGT-------------MNLTEPHCGTDLGLMRSK 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL--ED 264
                DG Y +SG K F+S+   D       ++LA++ G       V  F+VP+ L  ED
Sbjct: 179 AVPQDDGSYAISGQKIFISAGEHDMAENIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKED 238

Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           GS    NG+   +++ K+G   N+T  +++    G+LLG+ +     +  M     +   
Sbjct: 239 GSLGERNGVKCSKIEEKMGIHGNSTCVMDYDGAKGWLLGEEHKGMRAMFTMMNEARIGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAA 369
           +  ++   V+   A+ YAR     R V+G          LI  P ++R + D    I  A
Sbjct: 299 MQGLAQAEVAYQNALDYARDRLQGRSVTGVENPDGPADPLIVHPDIRRNLLDQKSFIEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D A+   +EAA+  +  + P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFLLWGAQMIDRAERGKDEAAHGMVSLLTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +++  R++    I  G+     LD++                L QD G        ++
Sbjct: 419 TGMSQFTRDARIAMIYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLV 465

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           +  I     D  +A F TE   L S++  L  AGM      F++N       + +  L G
Sbjct: 466 KGFIKEAGTDGAMAEF-TEP--LKSASKDLQSAGM-----FFMQN----GMKNPNAALAG 513

Query: 548 RFNAAHIIDSLYL 560
            ++  H+   + L
Sbjct: 514 SYDFMHLFGHVCL 526


>gi|293604778|ref|ZP_06687177.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816829|gb|EFF75911.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 589

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 57/364 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T+ ++ AL+T  +P + K +   + S ++  T             + LTE + G+
Sbjct: 124 LCPLLTNGAIEALLTAGSPELKKRFIGPMISGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+A I ++ Q + DG Y LSG K F++    D       ++LA++    EG  G   FLV
Sbjct: 171 DLAMIRTRAQPVGDGTYRLSGTKIFITYGDHDLTENILHLVLARLPDAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G+L+G  N     ++
Sbjct: 231 PKFLVNEDGSLGARNDVTCVSIEHKLGIKASPTATLQFGDAGGALGYLVGQENRG---LD 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKR- 357
            M I++      + V G+ ++       LA A    + R V G       +I  P ++R 
Sbjct: 288 AMFIMMNAARYAVGVQGIAIADRAYQHALAYAAERVQSRPVDGSSREAVTIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ +    +A  TA    LA++  +A  R    A    + PI K WC +M+  V 
Sbjct: 348 LGTMRALTEAGRALAYVTAGHADLAHASPDADERKRHLAIQEFLVPIVKGWCTEMSIDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L  
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLIGRKTLRDGGAVAQGLLD 467

Query: 471 TLEQ 474
            + Q
Sbjct: 468 AIRQ 471


>gi|116327391|ref|YP_797111.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331995|ref|YP_801713.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120135|gb|ABJ78178.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125684|gb|ABJ76955.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 563

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 199/460 (43%), Gaps = 53/460 (11%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS---VVHKE--LELLGEY-- 64
           +NQ   P  + F ++      G N Y  D +L AL+  +     V HK+  +E L  Y  
Sbjct: 5   LNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIGYGA 64

Query: 65  ----VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GL---- 115
               VL    +   +   Y   ++  Y   G R D V +      L R+  +D G+    
Sbjct: 65  LVGGVLDELTEASHKEGKYG--EVVKYDRTGNRIDAVMYSNE-QKLSRKISYDYGIVNLN 121

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHK 172
           + S W   F  + R        A  YL  Q   G +  P   +  M+ ++    TP    
Sbjct: 122 YHSSWKHPFTDLHR-------YALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTPEQKD 174

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +   +     D         +    G  +TE+ GG++++A  +  +K  +G + L+G K
Sbjct: 175 KYLSLVAGEGSD---------SHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEK 225

Query: 233 WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           WF S+P  D ++  A+VE    +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ 
Sbjct: 226 WFCSNP-GDLWVTTARVEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEII 284

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV--SGM-RVSLAEAIHYARRRHVSGG 347
           +       LG    + G    MK +I +    +S+  SG+ R +  EA  YA+ R   G 
Sbjct: 285 YDGVEAEALG--RPAHGIANLMKYVIGISRLHVSLAASGISRRAWMEAYEYAKFRTAYGS 342

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +++   + + ++D  L   A     FR  ++ +  K   E      I+AP+ KY C   
Sbjct: 343 KILEFSSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGE------ILAPLLKYKCSAT 396

Query: 408 APAVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGS 446
           +  +   ++  +GG+G + + S + R + +S  N    G+
Sbjct: 397 STEITYNSILVLGGNGIVGDFSALPRLHNDSIINETWEGT 436


>gi|317031932|ref|XP_001393689.2| hypothetical protein ANI_1_1336084 [Aspergillus niger CBS 513.88]
          Length = 650

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 50/317 (15%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----------------GIYCLSGHKWFL 235
           K +   G  +TE++GG+D+    +  ++++                  G + + G KWF 
Sbjct: 201 KVAWTSGQWMTERKGGSDVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFS 260

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           S+  S+  +MLAQ    +  F  P             D   NG+  QRLKNK+G +   T
Sbjct: 261 SATDSEMTVMLAQTTKGLSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPT 320

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            ELE     G+L+G+       V  +  +  L +A  S +G    LA    Y R R V G
Sbjct: 321 AELELKGVRGWLIGEEGRGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQG 380

Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDE---------------AKSRSE 388
            +L D P   R +A   +  AAA    F    L  S ++                + R +
Sbjct: 381 SLLEDIPQHVRWMAGETVKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQ 440

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSI 442
            A   R++ P  K      +   + E ME +GG GY E        ++AR +R++  N I
Sbjct: 441 AATLLRLITPALKALSSVGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPI 500

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+ + M  DV+ +++
Sbjct: 501 WEGTVSVMAEDVVRVIK 517


>gi|134078234|emb|CAK96815.1| unnamed protein product [Aspergillus niger]
          Length = 672

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 50/317 (15%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----------------GIYCLSGHKWFL 235
           K +   G  +TE++GG+D+    +  ++++                  G + + G KWF 
Sbjct: 223 KVAWTSGQWMTERKGGSDVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFS 282

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           S+  S+  +MLAQ    +  F  P             D   NG+  QRLKNK+G +   T
Sbjct: 283 SATDSEMTVMLAQTTKGLSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPT 342

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            ELE     G+L+G+       V  +  +  L +A  S +G    LA    Y R R V G
Sbjct: 343 AELELKGVRGWLIGEEGRGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQG 402

Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDE---------------AKSRSE 388
            +L D P   R +A   +  AAA    F    L  S ++                + R +
Sbjct: 403 SLLEDIPQHVRWMAGETVKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQ 462

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSI 442
            A   R++ P  K      +   + E ME +GG GY E        ++AR +R++  N I
Sbjct: 463 AATLLRLITPALKALSSVGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPI 522

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+ + M  DV+ +++
Sbjct: 523 WEGTVSVMAEDVVRVIK 539


>gi|297180334|gb|ADI16552.1| acyl-CoA dehydrogenases [uncultured bacterium HF4000_009C18]
          Length = 589

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 156/341 (45%), Gaps = 47/341 (13%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K + PKI   ++  T             + LTE   GTD+  + ++  + SDG + LS
Sbjct: 145 IKKKFLPKIVEGKWSGT-------------MCLTEPVCGTDLGLLKTKATEQSDGSFKLS 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQ 273
           G K F++S   D       ++LA+          +  FLVP++   EDGS    NG+   
Sbjct: 192 GQKIFITSGDHDLTENIIHLVLARTSDAPSGTKGISLFLVPKVQVKEDGSLGPRNGVSTG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G + ++T  L F    G+++G  N     +  M  L  +   I ++    ++  
Sbjct: 252 SIESKMGIKGSSTCVLNFDEAIGYMIGSKNKGLSSMFTMMNLERIVVGIQALGISEIAYQ 311

Query: 334 EAIHYARRRHVS----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            A++Y++ R               ++ID   ++R++  +   I    ALSF LA   +  
Sbjct: 312 NALNYSKERKQGKSNNSKTANGADLIIDHADIRRSLLSMKSIIEGERALSFWLAQQIEVS 371

Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + K + E +    +M P+ K     M   + ++AM+  GG GY +++ I + YR++
Sbjct: 372 LHHSDNKIKQEASDLVSLMTPVVKSLFTDMGMEITSDAMQIFGGYGYTKDQGIEQLYRDN 431

Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
               I  G+ +A  +D++   L+ K  ++ ++    +E+++
Sbjct: 432 RITPIYEGTNSAQSIDLVFRKLINKDGSVIDRYIKFIEEEI 472


>gi|225562669|gb|EEH10948.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 615

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 201/499 (40%), Gaps = 93/499 (18%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           PP ++   A+    + + L +  PS + ++L      VLS +    A  A  N P L   
Sbjct: 18  PPQYVEDAAFRR-IISLYLPSPIPSSIDEDLSRFSRLVLSRSHMAYAADAEKNQPYLRPL 76

Query: 88  GPGG--ERWDKVEFHPAWHALLRRSIHDGL--------HCSIWDRSFEPVVRKQAHKIRA 137
              G   + D +     W  L  R I +G+          S W+                
Sbjct: 77  STFGTENKQDPLVTSEGWRKLQYRGIEEGMVGIAYANARGSPWNN--------------- 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT--- 194
            R Y   +L   HL + S       AL+T P    D A K+  R  +  N +   +    
Sbjct: 122 -RAYQFIKL---HLWTSSA------ALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNR 171

Query: 195 ------SVAI--GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSG 230
                 SVA   G  +TE++GG+D+    +  +K+S                 G + L G
Sbjct: 172 LISRDPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCPLGPWQLDG 231

Query: 231 HKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGN 281
            KWF S+  ++  IMLA+   +G++  F  P  R +  G+      NG+  QRLKNK+G 
Sbjct: 232 FKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGT 291

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++  T ELE     G+L+G        +  +  +  + +   +V G    LA +  YA+ 
Sbjct: 292 KALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKV 351

Query: 342 RHVSGGILIDQP----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS---- 387
           R   G +L + P          VM R +  +A  +A+   +S    +   +A   S    
Sbjct: 352 RIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQATQASILPT 411

Query: 388 ---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPAN 440
              +  A  R++ P+ K      +   +   ME +GG GY+E      ++AR +R+    
Sbjct: 412 NAEQSGALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVL 471

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+ + M  D++ +++
Sbjct: 472 SIWEGTTDIMADDLVRVMK 490


>gi|322710100|gb|EFZ01675.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 530

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 58/339 (17%)

Query: 177 KIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIA--------------AITSQGQKI 221
           K+F+  Y   T++ P  K +   G  +TE+ GG+D++                 S+  +I
Sbjct: 65  KVFTDAYKRLTSRDP--KYAWTSGQWMTERTGGSDVSLTETVATYQPEGANGFASKQGQI 122

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED-------GSP------ 267
             G + ++G KWF S+  S+  ++LA+   G +  FL P    D       G P      
Sbjct: 123 PLGPWSINGFKWFSSATDSEMTVLLARTAAGGLSTFLAPMRKHDPEATTLTGEPKDDGRA 182

Query: 268 -NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            NG+  QRLKNK G +S  T EL   N  G+++G        +  +  L  + SA+ +V 
Sbjct: 183 LNGVRIQRLKNKFGTQSLPTAELVLDNMRGWMVGREGRGIHEISTILTLTRVHSAVAAVG 242

Query: 327 GMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLA---- 377
           G+   L  A  YA  R V  G      L+D P+  R +A I+ +      ++F  +    
Sbjct: 243 GVGRGLGIARAYALVRDVGAGGRKRTRLVDSPLHMRTLAKISAEYRRLMLVTFYTSYVLG 302

Query: 378 ---NSFDEAKSRSEEA---------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              +S D   S + +A            RIM+ + K + CK + A++   ME +GG GY+
Sbjct: 303 VSEHSLDARPSPALDALTPQGKLVEPLLRIMSQLAKAYVCKPSVALLFSCMEALGGVGYL 362

Query: 426 --EER---SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             EE+   +I+R YR++    I  G+ + +  D++  ++
Sbjct: 363 VNEEQEYLNISRIYRDTCVLPIWEGTTDVLCTDLIRAMK 401


>gi|114569386|ref|YP_756066.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339848|gb|ABI65128.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 585

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 182/411 (44%), Gaps = 73/411 (17%)

Query: 136 RAARLYLMAQLEAGHL---MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAP 190
           RA  + ++  ++  +L   + P +T  ++ AL+   T      + PK+ + E+  T    
Sbjct: 105 RALGVTVLEMIQGSNLSFGLGPMLTYGAIEALIEHGTDEQKAMYLPKLITGEWSGT---- 160

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIM 245
                    + LTE   G+D+ A+ ++ +   DG + +SG K F++    D       ++
Sbjct: 161 ---------MNLTEPSAGSDVGALRTKAEPNPDGSWAISGQKIFITWGDHDCAENIIHLV 211

Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           LA+  G       +  F+VP++L DGS N L    L++K+G   + T  +E++   G+L+
Sbjct: 212 LARTPGSPDGTKGISLFIVPKVLPDGSANSLKAIGLEHKLGIHGSPTCTMEYAGATGWLI 271

Query: 300 GDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI----- 348
           G  N        M+ +   ++SA ++V    V +AE     A+ YA  R     I     
Sbjct: 272 GGENAG------MRCMFTMMNSARLNVGVQGVGIAERAYQQALAYASDRKQGRAIDAEGP 325

Query: 349 ----LIDQPVMKRAIA------DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
               +I  P +KR ++        A  I  + A++  LA   DE + ++       ++ P
Sbjct: 326 APHAIIHHPDIKRTLSLMKAKIAAARAICVSCAVAADLAYHGDEDEEKAAAKRREELLTP 385

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           I K W   +   V +  ++  GG GYIEE   A+H R++    I  G+     +D++   
Sbjct: 386 IAKAWSTDVGVEVASANIQVHGGMGYIEETGAAQHLRDARITPIYEGTNAIQAIDLVGRK 445

Query: 457 LLEKGTNLFEQLFSTLEQ-----------DLGSSGKKVITILRDSISLCKE 496
           L       F++L++ ++Q           DL   G++    LRDS+   +E
Sbjct: 446 LSMADGAAFDELYADIDQTIESCLTSSHPDLPPLGER----LRDSLEALQE 492


>gi|152981179|ref|YP_001352277.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
 gi|151281256|gb|ABR89666.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 596

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 60/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ ALMT  + +  + + P   + ++  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALMTAGSDQQKEKFLPNFIAGKWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+A + S+     DG Y +SG K F++    D       ++LA+     EG  G   FLV
Sbjct: 171 DLALVRSRAVPQGDGTYKISGTKIFITYGEHDMAENIIHLVLARTPDAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           P+ L  EDGS     +  C   +++K+G +++ T  L+F +     G L+G  N     +
Sbjct: 231 PKFLVNEDGSLGERNDAFCVS-IEHKLGIKASPTAVLQFGDHGGAIGTLIGQENRG---L 286

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMK 356
           E M   I +++A  +V    +S+AE     A+ YA+ R  S  +        +I QP ++
Sbjct: 287 ETM--FIMMNAARFAVGIQGISVAERAYQKAVAYAKDRVQSKDLEGSATAVSIIHQPDVR 344

Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +   I AA AL++  A++FD      + K R  + A+   + PI K W  +M+  
Sbjct: 345 RMLMSMRAQIEAARALAYVGASAFDIAHHHGDEKVRDAQQAFYEFLVPIIKGWSTEMSID 404

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 405 VASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGT 440


>gi|321474240|gb|EFX85205.1| hypothetical protein DAPPUDRAFT_300359 [Daphnia pulex]
          Length = 621

 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 194/448 (43%), Gaps = 37/448 (8%)

Query: 35  NAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N++  D+LL       L A   S V  EL + G  V +    +L R      P L     
Sbjct: 53  NSFEGDTLLQRNLQRILPAEAYSNVKDELSMFGARV-ATDIYKLGRECELIPPYLKLQDA 111

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +KV    +W  L + S  +GL    ++R  +P  +  +  I+ ++ YL A     
Sbjct: 112 WANPQNKVVTCESWKELKKISAREGLISLAYER--DPKHQGFSRLIQMSKNYLFAPSSGL 169

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +    ++T  +   L ++  + H +    + SR  DP       +     G  +TEKRGG
Sbjct: 170 YSCPLAMTDGAAKTLEVSGLKDHGESFKNLTSR--DP-------EKFWTSGQWMTEKRGG 220

Query: 209 TDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---------EGRVGC 255
           +D+A  T +   I D     +Y L G+K+F S+  +D  + LA+V          G  G 
Sbjct: 221 SDVAGGT-ETLAIQDPNKENMYKLYGYKFFSSATDADIALTLARVVDPATGKITSGTKGL 279

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L   L+    P+ L   RLK K+G +   T EL        L+         +  M  +
Sbjct: 280 SLF--LIYVDQPSNLHLMRLKQKLGTKQLPTGELLLDGMTAELISPPGRGVASISQMLNI 337

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL--- 372
             L +A  SVS MR  ++ A  Y+ RR   G ++ + P+  R +AD+ L+  A  +L   
Sbjct: 338 TRLHNASASVSAMRRIISLARDYSNRRVAFGKLIRNHPLHVRTLADMELECRAGFSLFME 397

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RL +  +      E+    R++ P+ K +  K    V++E +E  GG GY+E+  I  
Sbjct: 398 AGRLLSLEENGTPTIEQQQLLRLLLPLLKLYTGKQCMKVVSEGLESFGGQGYMEDTGIPV 457

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
             R++    I  G+ N + LDVL  L K
Sbjct: 458 ILRDAQVTPIWEGTTNILSLDVLRALAK 485


>gi|322698381|gb|EFY90152.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 530

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 67/366 (18%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           GHL  P ++++  VA     +V  D   ++ SR  DP       K +   G  +TE+ GG
Sbjct: 48  GHLSQPKLSASLSVA---ERKVFTDAYRRLTSR--DP-------KYAWTSGQWMTERTGG 95

Query: 209 TDIA--------------AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           +D++                 S+  +I  G + ++G KWF S+  S+  ++LA+   G +
Sbjct: 96  SDVSLTETVATYQPEGASGFASKHGQIPLGPWSINGFKWFSSATDSEMTVLLARTAAGGL 155

Query: 254 GCFLVPRLLED-------GSP-------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             FL P    D       G P       NG+  QRLKNK G +S  T EL   N  G+++
Sbjct: 156 STFLAPMRKHDPEATTLTGEPKDDGRALNGVRIQRLKNKFGTQSLPTAELVLENMRGWMI 215

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPV 354
           G        +  +  L  + SA+ +V G+   L  A  YA  R V  G      L+D P+
Sbjct: 216 GQEGRGIHEISTILTLTRVHSAVAAVGGVGRGLGIARAYALVRDVGAGNRKRMRLVDSPL 275

Query: 355 MKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEA---------AYARIMAP 398
             R +A I+ +      ++F  +       +S D     + EA            R+M+ 
Sbjct: 276 HMRTLAKISAEYRRLMLVTFYTSYVLGVSEHSLDARPPPALEALTPQKKLVEPLLRVMSQ 335

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSILLGSGNAMVLD 453
           + K + CK +  ++   ME +GG GY+  EE+   +I+R YR++    I  G+ + +  D
Sbjct: 336 LAKAYVCKHSVELLFSCMEALGGVGYLVNEEQEYLNISRIYRDACVLPIWEGTTDVLCTD 395

Query: 454 VLNLLE 459
           ++  ++
Sbjct: 396 LIRAMK 401


>gi|83945393|ref|ZP_00957741.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851227|gb|EAP89084.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 594

 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 67/354 (18%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           KI S E+  T             + LTE   G+D+ A+ ++ +   DG + +SG K +++
Sbjct: 151 KILSGEWSAT-------------MNLTEPGAGSDVGALRTKAEPNGDGSWAISGQKIYIT 197

Query: 237 SPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKIG 280
               D       ++LA+  +G  G      F+VP+ + D  G+P   N L    L++K+G
Sbjct: 198 WGEHDCAENIIHLVLARTPDGAAGTKGISLFIVPKFIPDADGNPGERNALQAIGLEHKMG 257

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
              + T  +E+    G+LLGD            + I ++SA ++V    V +AE     A
Sbjct: 258 IHGSPTCTMEYDGAKGWLLGDEFKGMA-----AMFIMMNSARLNVGVQGVGIAERAYQQA 312

Query: 336 IHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAK 384
           + YA+ R     I         +I  P ++R +A +   I A  A+ +  A   D  E  
Sbjct: 313 LAYAKDRKQGRAINMDDHGPHAIIHHPDVRRTLAVMKAKIEAGRAICYHAAVEADLGEHH 372

Query: 385 SRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             ++E A+++    +M PI K WC  M   V +  ++  GG G+IEE   A+H R++   
Sbjct: 373 DDADEKAWSKRREDLMIPIAKAWCTDMGVDVASMGVQVHGGMGFIEETGAAQHLRDARIA 432

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
            I  G+     +D++                L +D G++  ++I  +R +I  C
Sbjct: 433 PIYEGTNGIQAIDLVG-------------RKLARDAGTAVGELIEDVRQTIEDC 473


>gi|317122676|ref|YP_004102679.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315592656|gb|ADU51952.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 566

 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 34/258 (13%)

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKN 277
           ++ L G K+F S + ++D  ++ A+ EG       +  FLVPR+   G  N    +RLK+
Sbjct: 212 VWRLDGEKYFCSGAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNRAGELN-YHVRRLKD 270

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K   R+  + E++F  +  FL+G+              IY    +++VS +  ++A  + 
Sbjct: 271 KSATRAVPSGEVDFRGSEAFLVGEAAQG----------IYYTLEVLTVSRLANAIA-GMG 319

Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSF----DE 382
            AR+ H+            G  LI+ P+++R + D+A+ IA    L F  A+ F    DE
Sbjct: 320 IARKAHLEVLERVRRRRSFGRALIEHPLIRRDLTDMAVRIAGGLVLGFHAADRFEKAWDE 379

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +    YAR ++ + K      A  V   AME  GG G++EE ++AR +RE+    I
Sbjct: 380 RPPYTARYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEYAVARWHREALITPI 439

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G  N   LD+L  ++K
Sbjct: 440 WEGPSNIQALDLLEAMDK 457


>gi|302414678|ref|XP_003005171.1| aidB [Verticillium albo-atrum VaMs.102]
 gi|261356240|gb|EEY18668.1| aidB [Verticillium albo-atrum VaMs.102]
          Length = 647

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 47/319 (14%)

Query: 199 GLGLTEKRGGTDIAAITS---------------QGQKISD---GIYCLSGHKWFLSSPMS 240
           G  +TE+ GG+D+    +               +GQ +     G + + G KWF S+  S
Sbjct: 205 GQWMTERSGGSDVRGTETIATRLTPTDLKGPGGRGQDVLGQPLGPWSIDGFKWFSSATDS 264

Query: 241 DAFIMLAQVEGRVGCFLVP--RLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           D  ++LAQ    +  F VP  R    GS  NG+  QRLKNK+G +   T ELE     G+
Sbjct: 265 DMTMLLAQTPKGLSAFCVPMRRKAGKGSELNGIRIQRLKNKMGTKGLPTAELELKGARGW 324

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+       +  +  +  L +   SVS     LA    Y + R V G  L +      
Sbjct: 325 LVGEEGKGVKAISTVLNITRLYTGAGSVSYWARGLAVCRAYTKVRKVRGAYLYENLQHNH 384

Query: 358 AIADIALDIAAATALSF--------------RLANSFDEAKSRSEEAA--YARIMAPITK 401
            +A   +   AATAL+F               + N+   A   ++E A    R++ P+ K
Sbjct: 385 WMAGETVKYQAATALTFFGVALLGCNEQGSSVMRNTPAAALIPNDETAKLLLRLLTPVIK 444

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSILLGSGNAMVLDVL 455
                 A A +   MEC+GG GY E        ++A+ +R+S   +I  G+ + M  DV 
Sbjct: 445 AQTSVAAVAGLRANMECLGGVGYCENHEDGGILNLAKIFRDSVVQTIWEGTVSVMADDVG 504

Query: 456 NLLE----KGTNLFEQLFS 470
            +L+    +G  + E +F+
Sbjct: 505 RVLKDKRIQGGRIIEDVFA 523


>gi|154279652|ref|XP_001540639.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412582|gb|EDN07969.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 615

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 202/499 (40%), Gaps = 93/499 (18%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           PP ++   A+    + + L +  PS + ++L      VLS +    A  A  N P L   
Sbjct: 18  PPQYVEDAAFRR-IISLYLPSPIPSSIDEDLSRFSRLVLSRSHMAYAADAEKNQPYLRPL 76

Query: 88  GPGG--ERWDKVEFHPAWHALLRRSIHDGL--------HCSIWDRSFEPVVRKQAHKIRA 137
              G   + D +     W  L  R I +G+          S W+                
Sbjct: 77  STFGTENKQDPLVTSEGWRKLQDRGIVEGMVGIAYANARGSPWNN--------------- 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT--- 194
            R Y   +L   HL + S       AL+T P    D A K+  R  +  N +   +    
Sbjct: 122 -RAYQFIKL---HLWTSSA------ALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNR 171

Query: 195 ------SVAI--GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSG 230
                 SVA   G  +TE++GG+D+    +  +K+S                 G + L G
Sbjct: 172 LISRNPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCPLGPWQLDG 231

Query: 231 HKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGN 281
            KWF S+  ++  IMLA+   +G++  F  P  R +  G+      NG+  QRLKNK+G 
Sbjct: 232 FKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVVGGAEDETELNGVRIQRLKNKLGT 291

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++  T ELE     G+L+G        +  +  +  + +   +V G    LA +  YA+ 
Sbjct: 292 KALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKV 351

Query: 342 RHVSGGILIDQP----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS---- 387
           R   G +L + P          VM R +  +A  +A+   +S    +   +A   S    
Sbjct: 352 RIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQATQASILPT 411

Query: 388 ---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPAN 440
              + +A  R++ P+ K      +   +   ME +GG GY+E      ++AR +R+    
Sbjct: 412 NAEQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVL 471

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+ + M  D++ +++
Sbjct: 472 SIWEGTTDIMADDLVRVMK 490


>gi|302667173|ref|XP_003025177.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517]
 gi|291189267|gb|EFE44566.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517]
          Length = 618

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 64/378 (16%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-----KAPMQKTS------VA 197
           GHL + S       A++T P    + A K+ SR  D  N     +A  + TS        
Sbjct: 132 GHLWTASS------AMVTCPGSMTNGAAKLLSRHLDSENGRIFAEALKRLTSHDPAIAWT 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSD 241
            G  +TE+ GG+D+    +  +K++       DG+         + L G KWF S+  ++
Sbjct: 186 SGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSVGMPLGPWRLDGFKWFSSATDAN 245

Query: 242 AFIMLAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293
             IMLA+  E  +  F  P  R ++   P     NG+  QRLKNK G ++  T ELE   
Sbjct: 246 MSIMLAKTGENSISAFYAPLRRQVKGKDPRESELNGVRIQRLKNKFGTKALPTAELEIKG 305

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G+L+G        +  +  +    + I SVS    SLA    Y++ R  SG +L D P
Sbjct: 306 MRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTP 365

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEA-----------------KSRSEEAAYARIM 396
              R +A   +  AA+  L+F +      +                 +  +   A  R++
Sbjct: 366 SYVRTLARDHVKYAASMHLTFFVVALLGVSEGSSSSSCMASQTNILPRDNNHTLALLRLL 425

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452
            P+ K      A   +  +ME +GG GY+E      +IAR +R++   SI  G+   M  
Sbjct: 426 TPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMAD 485

Query: 453 DVLNLLE--KGTNLFEQL 468
           D++ +++  KG +  + L
Sbjct: 486 DLMRVVKGSKGPDCLDAL 503


>gi|55978299|ref|YP_145355.1| acyl-CoA dehydrogenase, short-chain specific ( AidB protein)
           [Thermus thermophilus HB8]
 gi|55773472|dbj|BAD71912.1| acyl-CoA dehydrogenase, short-chain specific (probable AidB
           protein) [Thermus thermophilus HB8]
          Length = 541

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 185/445 (41%), Gaps = 46/445 (10%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y +D  L  L+ +F P    +E ELL  G Y+     +    +     P+L  +  
Sbjct: 17  GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    +L+R                P+VR           + +  L A 
Sbjct: 77  DGNRVDRVRLSPVQREVLKR--------------LRPIVRPPYEGGSWHHHFALGYLLAD 122

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206
             +   +T    VA      +HK          Y P   +  ++       G   +TE +
Sbjct: 123 GGLYCILTITHQVAYP----IHK----------YAPGLASWKERVLYGEAFGATWMTEIQ 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVP 259
           GG+D+ A  +  ++  +      G K+F S + ++D  ++ A+ EG       +  FL+P
Sbjct: 169 GGSDLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLP 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           RL  +G  N    +RLK K G R+  + E+E   +  +L+G          +   +  L 
Sbjct: 229 RLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLA 287

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +AI ++     +L E     RRR   G  L D P+++  + D+++  A   AL+     +
Sbjct: 288 NAIAAMGIAAKALLETRQRVRRRQSFGRFLADHPLVRHDLLDLSVRQAGGLALALAAVEA 347

Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           FD    E     E    AR ++ + K    + +  +   AME  GG G++EE ++AR +R
Sbjct: 348 FDRAWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHR 407

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ES    I  G  N   LD+L  ++K
Sbjct: 408 ESLITPIWEGPSNIQALDLLEAMQK 432


>gi|67541170|ref|XP_664359.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4]
 gi|40739383|gb|EAA58573.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4]
 gi|259480348|tpe|CBF71395.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_5G09980) [Aspergillus nidulans FGSC A4]
          Length = 643

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 207/505 (40%), Gaps = 82/505 (16%)

Query: 35  NAYSSDS----LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
           N +++D     +L   I +    +   L  LG+  +S    E +  A  N P +  Y   
Sbjct: 23  NTFTTDPSLRRILEWYIPHHVDALSPHLTRLGDEAVSAKIHEWSADAERNLPYVKWYNVW 82

Query: 91  GERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           GER+  D++     W  L      +GL      R  + ++  +  K R      MAQ   
Sbjct: 83  GERYGVDRLVTSEGWKRLGAWGAENGLR-----RECDLLMADKYGKERR-----MAQYAV 132

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY--------DPTNKAPMQKTSVAI-- 198
            ++  PS    S  A MT      D A  I S E          P   A  + TS     
Sbjct: 133 NYMTGPSSGLTSCPASMT------DGAALILSNEIARRSLPQDHPFQVALRRLTSRGTDA 186

Query: 199 ---GLGLTEKRGGTDIAAI---------------TSQGQ-KISDGIYCLSGHKWFLSSPM 239
              G  +TE+ GG+D+                   + GQ +I +G Y ++G K+F S+  
Sbjct: 187 WTSGQWMTERAGGSDVQNTETWATYSPLPASELRNATGQPQIDEGEYLVNGFKFFSSATD 246

Query: 240 SDAFIMLAQV--EGRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNATVEL 289
           ++  ++LA+    G++  FL P  R + D         NG+   RLKNK+G +   T EL
Sbjct: 247 ANIALLLAKTTPSGKLSVFLAPLRRTITDKDGKRHEVSNGVRIHRLKNKMGTKELPTAEL 306

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E  +    L+GDL+     +  +  +    + + S+   R +L+ A  +A+ R   G  L
Sbjct: 307 ELVDMRAHLVGDLDRGVQTIAPLLNITRAHTFLGSLGNWRRALSIAKAFAKTRTTVGEPL 366

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA-------------R 394
              P+  R +A++     A   L+F      D  E K+R  +   A             R
Sbjct: 367 WLIPMHLRLMAELEGRHRAGMELAFFTIAVMDLVENKTRDGQRELAHLPRAGAEANTVFR 426

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNA 449
            +  ++K    KMA   + E  E +GG GY++E      +++R  R +  NSI  G+ N 
Sbjct: 427 TLTALSKAVISKMAVVGVQECQEAMGGVGYMDEPDEPEFNVSRILRNTFVNSIWEGTTNV 486

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQ 474
           +  + +  L KG N F+ L   +E+
Sbjct: 487 LASECVRFLLKGEN-FDVLAGWVER 510


>gi|1703067|sp|Q06319|ACDS_MEGEL RecName: Full=Acyl-CoA dehydrogenase, short-chain specific;
           AltName: Full=Butyryl-CoA dehydrogenase; Short=BCAD;
           AltName: Full=SCAD
 gi|1065243|pdb|1BUC|A Chain A, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase
           From Megasphaera Elsdenii
 gi|1065244|pdb|1BUC|B Chain B, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase
           From Megasphaera Elsdenii
 gi|149886|gb|AAA03594.1| acyl-CoA dehydrogenase [Megasphaera elsdenii]
          Length = 383

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 35/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-L 257
            GLTE   GTD +   +   K  DG Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 126 FGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
              +LEDG+P G  Y + ++K+G  ++ T+EL F         D+ V   P E+M     
Sbjct: 186 TAFILEDGTP-GFTYGKKEDKMGIHTSQTMELVFQ--------DVKV---PAENMLGEEG 233

Query: 313 ---KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              KI ++ LD   + V+         +LA+A+ Y+++R   G  L     +   +AD+ 
Sbjct: 234 KGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMK 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  L ++ A    E K  + +AA A+ +A         +A  V  EA++  GG G
Sbjct: 294 MQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVA-------SDVAMRVTTEAVQIFGGYG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y EE  +ARH R++    I  G+    ++
Sbjct: 347 YSEEYPVARHMRDAKITQIYEGTNEVQLM 375


>gi|45656282|ref|YP_000368.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599516|gb|AAS69005.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 565

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 43/328 (13%)

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           R A  YL  Q   G +  P   +  M+    AL T+ +  K          Y P      
Sbjct: 135 RYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEK----------YLPLVAGEG 184

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
            ++    G  +TE+ GG++++A  +  +K  +G + L+G KWF S+P  D ++  A+VE 
Sbjct: 185 SQSHFMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFCSNP-GDLWVTTARVED 243

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ +       LG       P 
Sbjct: 244 TNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDGVEAEALGR------PA 297

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRAI 359
             +  LI     ++ +S + VS+A          EA  YA+ R   G  +++   + + +
Sbjct: 298 HGIANLI---KYVIGISRLHVSIAASGISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQL 354

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +D  L   A     FR  ++ +  K   E      ++AP+ KY C   +  +   ++  +
Sbjct: 355 SDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEITYNSILVL 408

Query: 420 GGSGYIEERS-IARHYRESPANSILLGS 446
           GG+G + + S + R + +S  N    G+
Sbjct: 409 GGNGIVGDFSPLPRLHNDSIINETWEGT 436


>gi|85374006|ref|YP_458068.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis
           HTCC2594]
 gi|84787089|gb|ABC63271.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis
           HTCC2594]
          Length = 601

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 159/365 (43%), Gaps = 55/365 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL+   +P   + + PK+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  I ++ +  +DG Y ++G K F+S+    M+D  I  +LA+  G       +  F+V
Sbjct: 173 DLGLIRTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  EDG+P   NG+    +++K+G   NAT  + + +  G+++G+ N     +  M 
Sbjct: 233 PKFIVDEDGNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD----------IA 363
               L   I  +    V+   A+ YA  R    G  +  P    A AD          + 
Sbjct: 293 NAARLGVGIQGLGQAEVAYQNAVAYALDRRQ--GRALTGPAEPEAKADPIFVHPDVRRML 350

Query: 364 LDIAAAT----------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +D  A T          AL   L +     + R+E  A   +M P+ K +      A+  
Sbjct: 351 MDGKAFTEGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYGTDKGYAIAT 410

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471
           +  +  GG GYIEE  ++++ R++    I  G+     +D+    L + G    +  F  
Sbjct: 411 DMQQVFGGHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRM 470

Query: 472 LEQDL 476
           + +++
Sbjct: 471 IGEEI 475


>gi|24213138|ref|NP_710619.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193845|gb|AAN47637.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 565

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 43/328 (13%)

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           R A  YL  Q   G +  P   +  M+    AL T+ +  K          Y P      
Sbjct: 135 RYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEK----------YLPLVAGEG 184

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
            ++    G  +TE+ GG++++A  +  +K  +G + L+G KWF S+P  D ++  A+VE 
Sbjct: 185 SQSHFMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFCSNP-GDLWVTTARVED 243

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ +       LG       P 
Sbjct: 244 TNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDGVEAEALGR------PA 297

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRAI 359
             +  LI     ++ +S + VS+A          EA  YA+ R   G  +++   + + +
Sbjct: 298 HGIANLI---KYVIGISRLHVSIAASGISRRAWTEAYEYAKFRTAYGSKILEFSSLLKQL 354

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +D  L   A     FR  ++ +  K   E      ++AP+ KY C   +  +   ++  +
Sbjct: 355 SDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEITYNSILVL 408

Query: 420 GGSGYIEERS-IARHYRESPANSILLGS 446
           GG+G + + S + R + +S  N    G+
Sbjct: 409 GGNGIVGDFSPLPRLHNDSIINETWEGT 436


>gi|46255145|ref|YP_006057.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27]
 gi|46197994|gb|AAS82404.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27]
          Length = 541

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 185/445 (41%), Gaps = 46/445 (10%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y +D  L  L+ +F P    +E ELL  G Y+     +    +     P+L  +  
Sbjct: 17  GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    +L+R                P+VR           + +  L A 
Sbjct: 77  DGNRVDRVRLSPVQREVLKR--------------LRPIVRPPYEGGSWHHHFALGYLLAD 122

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206
             +   +T    VA      +HK          Y P   +  ++       G   +TE +
Sbjct: 123 GGLYCILTITHQVAYP----IHK----------YAPGLASWKERVLYGEAFGATWMTEIQ 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVP 259
           GG+D+ A  +  ++  +      G K+F S + ++D  ++ A+ EG       +  FL+P
Sbjct: 169 GGSDLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLP 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           RL  +G  N    +RLK K G R+  + E+E   +  +L+G          +   +  L 
Sbjct: 229 RLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLA 287

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +AI ++     +L E     RRR   G  L D P+++  + D+++  A   AL+     +
Sbjct: 288 NAIAAMGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALALAAVEA 347

Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           FD    E     E    AR ++ + K    + +  +   AME  GG G++EE ++AR +R
Sbjct: 348 FDRAWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHR 407

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ES    I  G  N   LD+L  ++K
Sbjct: 408 ESLITPIWEGPSNIQALDLLEAMQK 432


>gi|315051740|ref|XP_003175244.1| aidB protein [Arthroderma gypseum CBS 118893]
 gi|311340559|gb|EFQ99761.1| aidB protein [Arthroderma gypseum CBS 118893]
          Length = 618

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 192/476 (40%), Gaps = 80/476 (16%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  PS + ++       V+S    + A  A  N P L      G   + D +     W
Sbjct: 35  LPSPLPSSLEEDFTRFSRLVISKPVLDYAAEAERNQPYLKPLSTFGIENKQDSLVTSEGW 94

Query: 104 HALLRRSIHDGLHCSIWDRSFEP--VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            AL   +I +GL       + EP   V       R ++          HL +PS      
Sbjct: 95  RALQDINIREGLV----GLAPEPGWAVNDTKWNTRVSKGI------KSHLWTPSS----- 139

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTD 210
            A++T P    D A ++ SR  D  N         +   +  ++A   G  +TE++GG+D
Sbjct: 140 -AMVTCPGSMTDGAARLLSRHLDGENGQIFAEALKRLTSRDPTIAWTSGQWMTERKGGSD 198

Query: 211 IAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
           +    +  +K++                 G + L G KWF S+  ++  IMLA+  E  +
Sbjct: 199 VRGTETVARKLTPQEMEEDAGVDSVGMPLGPWRLDGFKWFSSATDANMSIMLAKTGENSI 258

Query: 254 GCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             F  P  R ++   P     NG+  QRLK K G ++  T ELE     G+L+G      
Sbjct: 259 SAFYAPLRRQVQGKDPKASELNGVRIQRLKKKFGTKALPTAELEIKGMRGYLVGKEGQGV 318

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +  +    + I SV     SLA    Y++ R  SG +L D P   R +A   +  
Sbjct: 319 KEISTILNITRAGNCIASVGYWGRSLAICRAYSKVRVTSGRLLQDTPSYIRTLARDHVKY 378

Query: 367 AAATALSFRL-------------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           AA+  L+F +                    N   + K+ + +    R++ P+ K      
Sbjct: 379 AASMHLTFFILALLGISEGGTISSCMAAQVNIIPQDKNHTLQ--LIRLLTPMAKARTALR 436

Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           A   +  +ME +GG GY+E      +IAR +R++   SI  G+   M  D++ +++
Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDLMRVVK 492


>gi|115399798|ref|XP_001215488.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191154|gb|EAU32854.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 634

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 198/481 (41%), Gaps = 76/481 (15%)

Query: 35  NAYSSD-SLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD SL   L    P    + +   L  LG   +S   +E +  A    P + +Y  
Sbjct: 24  NTYTSDASLQRQLSWYIPHDTLTHIQSHLTQLGAEAISDQIREWSANAERQQPYVKSYNV 83

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            GER+D  K+     W  L R  +  G+    +D++  P  R             + Q  
Sbjct: 84  WGERYDYDKLVTSEGWKQLGRWGVRHGVVSLGYDQTLGPERR-------------LIQYA 130

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY-----DPTNKAPMQK------TSV 196
             +L +PS        L + P    D A ++ +        D    A  QK       S 
Sbjct: 131 VNYLYAPSS------GLYSCPISMTDGAARVLTNHLSALPADHPFHAVFQKLTSRGEDSW 184

Query: 197 AIGLGLTEKRGGTDI-----------AAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFI 244
             G  +TE+ GG+D+           A  TSQ    + +G Y ++G K+F S+  ++  +
Sbjct: 185 TSGQWMTERTGGSDVQETETWATYSPATHTSQASNGLDEGDYLINGFKFFSSATDANIAL 244

Query: 245 MLAQV-EGRVGCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +LA+   G++  FL P     +  DG+P    NG+   RLKNK+G +   T ELE  +  
Sbjct: 245 LLAKTASGKLSLFLAPLRKTVVGSDGTPREVTNGVRIHRLKNKLGTKELPTAELELRDMR 304

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G L+     +  +  +    + I S++G R +++ A  +A+ R   G  L   P+ 
Sbjct: 305 AHLVGALDAGIPTIAPLLNITRAHTFIGSLAGWRRAISIAKAFAKARTTVGEPLWLIPMH 364

Query: 356 KRAIADIALDIAAATALSF----RLANSFDEA---------KSRSEEAAYARIMAPITKY 402
              +AD+ +    A  L F     +A + +           ++  E A   R +  I K 
Sbjct: 365 LNLLADMEIRHRGAMNLGFFAIAVMAMTENPGAAPVAPHLPRAGDEAAVVLRALTAIGKA 424

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNL 457
              K A A I E  E +GG GY++E      +IAR  R +  N+   G    +  +++  
Sbjct: 425 VVSKSAIAGIQECQEAMGGVGYMDEADEPEFNIARIMRNTIVNATWEGPTGVLASELIRF 484

Query: 458 L 458
           L
Sbjct: 485 L 485


>gi|313679494|ref|YP_004057233.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152209|gb|ADR36060.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 535

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 13/286 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           +TE +GG+D+ A  +  ++        +G K+F S + ++D  +  A+ EG       + 
Sbjct: 156 MTEIQGGSDLGANRTVARREGGVWRLFAGDKYFASGAGLADVAVATARPEGAPAGPKGLA 215

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVPRL  DG+ N    +RLK K G R+  + E+E   +  +L+G          +   
Sbjct: 216 LFLVPRLRADGTLN-FTVRRLKVKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLT 274

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L +A+ ++     ++ E     +RR   G  L   P+++  + ++A+  A   AL+F
Sbjct: 275 VSRLANAVAAMGIAGKAILEVRERVQRREAFGRPLAAWPLVRHDLLELAVRQAGGLALAF 334

Query: 375 RLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              ++FD A +     +E   +AR ++ + K      A A+   AME  GG G++EE ++
Sbjct: 335 AAVDAFDRAWADRPPYTERYHFARFLSHLAKNRTADHAAAITRLAMELFGGLGFLEEYAV 394

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           AR +RE+    I  G  N   LD+L  ++K     E   + LE+ L
Sbjct: 395 ARWHREALITPIWEGPSNVQALDLLEAMQK-KRAHEPFLAWLEERL 439


>gi|218782675|ref|YP_002433993.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764059|gb|ACL06525.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 615

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 68/364 (18%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           I  A     A   AGH       +  M+ +  T +  + +  K++S E+  T        
Sbjct: 117 IIGANFAFAAYGYAGH------GTGKMIEIFGTDKQKELYLKKLYSAEWGGT-------- 162

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+D+  +++      DG Y +SG+K F++    D        +LA++
Sbjct: 163 -----MVLTEPEAGSDVGNLSTTATPNDDGTYNISGNKIFITGAEQDLTPNVIHPVLARI 217

Query: 250 EGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
           EG       +  F+VP++   +DGS   PN +    +++K+G + ++T  L F       
Sbjct: 218 EGAPKGTKGISLFIVPKIWVNDDGSLGEPNDVVCTGIEHKMGLKGSSTCSLTFGGQGKCK 277

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSA----IMSVSGMRVSLAE--AIHYARRR------- 342
           G LLG++N      + M+++ ++ +     + ++     S A   A++YA+ R       
Sbjct: 278 GVLLGEVN------KGMQVMFHMMNEARLLVGTIGACNASAAYLYAVNYAKERVQGRDLD 331

Query: 343 -----HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------A 391
                  +   +I  P ++R +  +   +    +L +  AN FD+ +  ++EA       
Sbjct: 332 DMFNHDATPVTIIKHPDVRRMLLWMKAHVDGMRSLCYYGANLFDKIELETDEAKKDYMQG 391

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I+ PI K +C      V  EA++C GG GY +E  + +  R+S  NSI  G+     
Sbjct: 392 VIEILTPIIKSYCTDRGFQVCGEAIQCYGGYGYTQEFPVEQIMRDSKINSIYEGTNGIQA 451

Query: 452 LDVL 455
           +D+L
Sbjct: 452 MDLL 455


>gi|163738877|ref|ZP_02146290.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161387682|gb|EDQ12038.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 568

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 45/326 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+   + DG Y +SG K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKADPLDDGTYAISGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA++         +  FLVP+ L D     G  N L    L++K+
Sbjct: 197 SWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLPDADGNPGKANDLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----E 334
           G   + T  +++    G+++G             +   +++A + V G  V +A     +
Sbjct: 257 GLHGSPTCVMQYDGAIGWMIGQPGGGLA-----AMFTMMNNARLGVGGQGVGIAGAAYQK 311

Query: 335 AIHYARRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
           A+ YA  R     + G ++D   ++R + ++  D+ AA A+    + + D   A +  E 
Sbjct: 312 ALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATATQEW 371

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A  + PI K +  +    V    ++  GG G+IEE   A+ YR+    +I  G+   
Sbjct: 372 AARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGI 431

Query: 450 MVLDVLNL-LEKGTNLFEQLFSTLEQ 474
             +D++   +  G ++  +L   +E+
Sbjct: 432 QAMDLVGRKMMDGGDMAHRLIDEIEE 457


>gi|163741877|ref|ZP_02149267.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161385050|gb|EDQ09429.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 568

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 45/326 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+   + DG Y +SG K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKADPLDDGTYAISGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA++         +  FLVP+ L D     G  N L    L++K+
Sbjct: 197 SWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLPDADGNPGKANDLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----E 334
           G   + T  +++    G+++G             +   +++A + V G  V +A     +
Sbjct: 257 GLHGSPTCVMQYDGAIGWMIGQPGGGLA-----AMFTMMNNARLGVGGQGVGIAGAAYQK 311

Query: 335 AIHYARRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
           A+ YA  R     + G ++D   ++R + ++  D+ AA A+    + + D   A +  E 
Sbjct: 312 ALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATATQEW 371

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A  + PI K +  +    V    ++  GG G+IEE   A+ YR+    +I  G+   
Sbjct: 372 AARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGI 431

Query: 450 MVLDVLN-LLEKGTNLFEQLFSTLEQ 474
             +D++   +  G ++  +L   +E+
Sbjct: 432 QAMDLVGRKMMDGGDMAHRLIDEIEE 457


>gi|70607507|ref|YP_256377.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68568155|gb|AAY81084.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 557

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 22/293 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLS-SPMSDAFIMLAQVEGR------ 252
            TE +GG+D+ A   +  K  DG  + L+G  K+F S + ++   ++ A+ +G       
Sbjct: 168 FTEVQGGSDLGANLVEAYK--DGNTWKLNGITKYFASDAGLAHYALVTARPKGAPSGAKG 225

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G FL P+L   G  N L  +RLK K    S  T E+EF  +    +G+LN       + 
Sbjct: 226 LGLFLAPKLDSSGRRNFLI-RRLKEKSATISVPTGEVEFHGSEAQPIGELNQGIYYTVET 284

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  + +A  ++   R +  EA +YA++R   G  LI+ P+++R + D+ + I    AL
Sbjct: 285 LTVSRIANAFGALGLARKAYLEAYYYAQKRKAFGKPLIEHPLVRRDLLDMEVYIEGTMAL 344

Query: 373 SFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + +  + F ++       +E   YAR++  I K     M+  V   AME  GG G++ E 
Sbjct: 345 ALKSVSEFQKSWMSTPPYNENYNYARLLTHIAKNMTADMSAYVTKMAMELHGGIGFLREF 404

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL-----FEQLFSTLEQD 475
            I R +RE+    I  G  N   LD+L  L++K  +L      E L + L++D
Sbjct: 405 PIERLHREALITPIWEGPSNIQALDMLEALVKKKAHLTLIKDMENLVNQLKED 457


>gi|260431589|ref|ZP_05785560.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415417|gb|EEX08676.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 584

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 34/302 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+TS+ +   DG Y ++G K ++
Sbjct: 167 PKLMSGEWSGT-------------MNLTEPQAGSDVGALTSKAEPNGDGTYSVTGQKIYI 213

Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLL--EDGSP---NGLCYQRLKNKI 279
           S   +D       ++LA++ +G  G      FLVP+ +  E+G+P   N L    L++K+
Sbjct: 214 SWGDNDFCENVCHLVLARLPDGAPGTKGISLFLVPKFIPDENGNPGVANDLKVVSLEHKM 273

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G  +     +  M     L      V     +   A+ YA
Sbjct: 274 GLHGSPTCVMQYDGAKGWLVGQEHKGMAAMFTMMNNARLGVGGQGVGAAEGAYQHALAYA 333

Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYAR 394
             R       G +ID   ++R + D+  D+ AA A+    A + D AK+   ++ AA A 
Sbjct: 334 LERKQGKTPSGTIIDHADVRRMLMDMRADLFAARAIMLANAAATDMAKATGNADWAARAA 393

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ PI K +  +    V    ++  GG GYIEE   A++YR+    +I  G+     +D+
Sbjct: 394 LLTPICKAFGTQTGMRVAETGLQVHGGMGYIEETGAAQYYRDVRVTAIYEGTNGIQAMDL 453

Query: 455 LN 456
           + 
Sbjct: 454 VG 455


>gi|254455519|ref|ZP_05068948.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082521|gb|EDZ59947.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 587

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 40/319 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++  + SDG Y +SG K F++S   D       +++A+        
Sbjct: 164 LTEPVCGTDLGMLKTKAVEQSDGTYKISGQKIFITSGDQDLTENIIHLVIARASDSPPGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  EDG+    NG+    +++K+G + +AT  L F    G+++G  N  
Sbjct: 224 KGISLFLVPKFIVNEDGTIGPRNGVSTGSVEHKMGIKGSATCVLNFDEAVGYMIGPKNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILIDQ 352
              +  M  ++ L+  I+ V G+ +S      ++ YA+ R                +I+ 
Sbjct: 284 ---LSQMFTMMNLERIIVGVQGLGISEIAYQNSLSYAKERKQGKTNNSKSTNGADFIIEH 340

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
             ++R++ ++   I    AL F L+   +      + K + E + Y  +M P+ K     
Sbjct: 341 ADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHPDEKIKQEASDYVSLMTPVVKSLFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
           +A  + ++AM+  GG G+ +++ I + YR++    I  G+ +    D++   L  K  N+
Sbjct: 401 LATEITSDAMQIHGGYGFTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLSNKNGNI 460

Query: 465 FEQLFSTLEQDLGSSGKKV 483
                + ++ +  S  +KV
Sbjct: 461 IGNFLNMIKMECESKNEKV 479


>gi|304321110|ref|YP_003854753.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303300012|gb|ADM09611.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 594

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 36/311 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE + GTD+  I ++ +   DG Y +SG K ++S+    MSD  I  +LA++ G   
Sbjct: 163 MNLTEPQCGTDLGLIRTKAEPQDDGTYKISGQKIWISAGEHDMSDNIIHLVLAKIPGGPD 222

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ +  EDGS    N +    L+ K+G   NAT  + +    G+L+G+ +
Sbjct: 223 GVKGISLFIVPKFMVNEDGSLGERNNVVCGGLEEKMGIHGNATCVMNYDEATGYLVGEEH 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354
                +  M     L   +  +S   V+   A  +A+     R +SG    DQP      
Sbjct: 283 KGLRAMFIMMNEARLGVGLQGLSAAEVAYQNAAAFAKDRLQMRSISGTKAPDQPADPIIV 342

Query: 355 ---MKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++R + D  +    A  L++       LA+  ++  +R +   Y  ++ PI K +  
Sbjct: 343 HPDVRRMLLDTRVFTEGARMLTYWAALHEDLAHKSEDEATRQKAKDYMGLLTPIIKAFNT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
                   ++M+  GGSGY+EE  +++  R++    I  G+     LD++   L+ +G  
Sbjct: 403 HKGFEGTCDSMQVFGGSGYVEEWGMSQFLRDTKIAMIYEGTNGIQALDLVGRKLMAEGGR 462

Query: 464 LFEQLFSTLEQ 474
           L++  F  +++
Sbjct: 463 LWQTFFKEVDE 473


>gi|134093872|ref|YP_001098947.1| putative acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133737775|emb|CAL60820.1| Acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 596

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 163/345 (47%), Gaps = 57/345 (16%)

Query: 143 MAQLEAGHL---MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           M  L A +L   + P +T  ++ ALMT  +    + + P   + ++  T           
Sbjct: 112 MEMLNAANLSFALCPLLTDGAIEALMTAGSEAQKETFLPNFIAGKWTGT----------- 160

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
             + LTE + G+D+A + S+     DG Y +SG K F++    D       ++LA+    
Sbjct: 161 --MNLTEPQAGSDLAMVRSRAVPQGDGTYKISGTKIFITYGEHDMAENIVHLVLARTPDA 218

Query: 250 -EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298
            EG  G   F+VP+ L +     G+ N      +++K+G R++ T  L+F +     G L
Sbjct: 219 PEGVKGISLFVVPKFLVNADGSLGARNDAYCVSIEHKLGIRASPTAVLQFGDHGGAIGTL 278

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI------- 348
           +G+ N     +E M I++      + + G+ V+     +A+ YA+ R  S  +       
Sbjct: 279 VGEENRG---LETMFIMMNAARFAVGIQGIAVAERAYQKAVSYAKDRVQSKDLEGSATAV 335

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401
            +I QP ++R +  +   I AA AL++  A +FD      +A+ RS   A+   + P+ K
Sbjct: 336 SIIHQPDVRRMLMSMRAQIEAARALAYVGAAAFDIAHHHADAEVRSSHQAFYEFLVPVIK 395

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            W  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 396 GWATEMSIDVASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGT 440


>gi|327277826|ref|XP_003223664.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Anolis
           carolinensis]
          Length = 534

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 173/450 (38%), Gaps = 119/450 (26%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQE---LARMANY 79
           A+ QP   IG N +  D LL + + ++ P+ + +E+ L  +   +   +E   L R    
Sbjct: 49  AMEQP--HIG-NPFQEDPLLKSYLGSHLPAQIFREVSLDLDRFGARVTKEIDFLGRECEL 105

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  + P G+R D++                 L C+ W         KQ  K+ A  
Sbjct: 106 HPPRLLTFDPWGQRKDQL-----------------LTCAAW---------KQMKKVAA-- 137

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                  E G           +VA+              + R+Y               G
Sbjct: 138 -------EEG-----------LVAM-------------AYERKYAQWXXXXXXXXXWTSG 166

Query: 200 LGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------E 250
             +TE++GG+D+   T    ++ SDG Y L G KWF S+P SD  + LA++        E
Sbjct: 167 QWMTERKGGSDVVGSTETIAREQSDGTYSLHGFKWFTSAPDSDVALALARIMTPHGATKE 226

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G +  F +  L  +G  NG+  +RLK+K+G R   T E+         +         + 
Sbjct: 227 G-LSLFYLQLLDGEGKRNGMEIRRLKDKLGTRQLPTAEILLDGAKALRISPEGRGVPSIA 285

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +  + +AI + + MR     A  YA +R   G  L D P+  + +A +        
Sbjct: 286 AMLTITRIYNAISAAAAMRRVTHLARDYATKRKAFGKTLNDHPLHVQTLARM-------- 337

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                                              K A AV +E +EC GG G++E+  +
Sbjct: 338 -----------------------------------KSAVAVASEGLECFGGQGFMEDTGL 362

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A   R++    I  G+ N + LDVL  + K
Sbjct: 363 AAILRDAQVLPIWEGTTNILSLDVLRSIHK 392


>gi|311105565|ref|YP_003978418.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760254|gb|ADP15703.1| acyl-CoA dehydrogenase, middle domain protein 6 [Achromobacter
           xylosoxidans A8]
          Length = 589

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 51/332 (15%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + P +T+ ++ AL+T        +P++  R  +P        T     + LTE + G+D+
Sbjct: 124 LCPLLTNGAIEALLTA------GSPELKQRFIEPMISGRWTGT-----MNLTEPQAGSDL 172

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLVPR 260
           A + S+ Q + DG Y +SG K F++    D       ++LA++    EG  G   FLVP+
Sbjct: 173 AMVRSRAQPVGDGTYRISGTKIFITYGEHDLAENILHLVLARLPDAPEGVKGISLFLVPK 232

Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L  EDG+    N +    +++K+G +++ T  L+F +     G+L+G  N     ++ M
Sbjct: 233 FLVNEDGTLGARNDVHCVSIEHKLGIKASPTCTLQFGDAGGALGYLVGQENRG---LDAM 289

Query: 313 KILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKRAIA 360
            I++      + V G+ V+       LA A    + R V G       +I  P ++R + 
Sbjct: 290 FIMMNAARYAVGVQGVAVADRAHQHALAYAAERVQSRPVDGSSKDAVPIIQHPDVRRMLG 349

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAE 414
            +     A  AL++  A   D+A +  +  A  R +A      PI K WC +M+  V + 
Sbjct: 350 TMRALTEAGRALAYYTAGHADQAHANPDAEARKRHLAVQEYLVPIVKGWCTEMSIDVASL 409

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 410 GVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441


>gi|316932355|ref|YP_004107337.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600069|gb|ADU42604.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 596

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  AL    +P   + + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++  K +DG Y ++G K F+S+    M+D  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ NG+    +++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFLVNPDGTVGTRNGVICGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355
               L  A+  ++   V+   A+ YAR     R +SG    D+P              + 
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A  +   TAL   +A+   +AK R     +  +M P+ K        A    A
Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQSADDHLGLMTPVLKGVLTDGGFANAVAA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI    + +  R++    I  G+     LD++ 
Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|218295425|ref|ZP_03496238.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244057|gb|EED10583.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 514

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 195/448 (43%), Gaps = 55/448 (12%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANY----NTPQLHAY 87
           G N Y+ D  L A++  F P +  +EL   G  V     +E+  +A++    + P+L  +
Sbjct: 9   GENHYNLDPDLKAVLDAFAPGLPQEELSAFGRLV----GEEVLEVAHHVDALSPPRLLMH 64

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-YLMAQL 146
              G R D+    PA  ALL +                P+VR  A++ R   L Y +  L
Sbjct: 65  DLDGNRIDRALLSPAERALLEK--------------LRPMVRP-AYEGRGWPLHYALGYL 109

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LT 203
            A   +   +T    VA      +HK          Y P   A  ++       G   +T
Sbjct: 110 LADGGLYCILTITHQVAYA----LHK----------YAPEWSAVKRELLYGKAYGATWMT 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256
           E +GG+D+ A  +  ++  +      G K+F S + ++D  ++ A+ EG       +  F
Sbjct: 156 EVQGGSDLGANRTLARREGEAYRLYHGDKYFASGAGLADYALVTARPEGAPEGPKGLALF 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR +E G  N    +R K K+  R+  + E+E   +  +LLG          +   + 
Sbjct: 216 LLPREVE-GRLN-FRVRRFKEKLATRAVPSGEVELEGSLAYLLGRPEEGIYYTLETLTVA 273

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF-- 374
            L +A+ ++   + +  E +   RRR   G  L+D  +++  + ++ L   A TAL+F  
Sbjct: 274 RLANAVAAMGLAKKAHLEVLFRVRRRTAFGRRLLDHDLVQHDLLEMRLRQVAGTALAFLA 333

Query: 375 --RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R    ++E    S+    AR+++ + K    + A  +   AME  GG G++E+  +AR
Sbjct: 334 VARFDQVWEERPPYSQAYHLARLLSHLAKGRTAEHAAQITGLAMELFGGLGFLEDYGVAR 393

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            +RE+    I  G  N   LD+L  + K
Sbjct: 394 FHREALITPIWEGPANIQALDMLEAVAK 421


>gi|255937167|ref|XP_002559610.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584230|emb|CAP92262.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 605

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 195/476 (40%), Gaps = 84/476 (17%)

Query: 35  NAYSSDSLLVALIANF-PS----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD  L  ++  + P+    ++   L  LGE  +S         A  N P +  Y  
Sbjct: 24  NTYTSDISLQRMLGWYLPAQTLKLIEPHLAQLGEEAVSPQVFAWNADAETNLPYVKKYNV 83

Query: 90  GGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+  D++     W  L +     G+    +D ++  V R+             AQ  
Sbjct: 84  WGQRYAYDRLVTTDGWKQLGKWGAKHGVVSLGYDHTYG-VYRR------------TAQYA 130

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A +L +PS       A+   P    D A                   ++  G  +TE+ G
Sbjct: 131 AVYLYAPSS------AMYRCPMSMSDGA-------------------ALTSGQWMTERAG 165

Query: 208 GTDIA--------AITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           G+D+         A   Q  K SD    G Y +SG K+F S+  ++   +LA+ + G++ 
Sbjct: 166 GSDVQNTETWATYAPLPQESKTSDVLAEGDYLISGFKFFSSATDANVAFLLAKTDSGKLS 225

Query: 255 CFLVP----RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            F+ P     +  DG P    NG+   R KNK+G +   T ELE       L+G+L+   
Sbjct: 226 TFIAPLRKTSIGADGKPEETSNGVRIHRFKNKLGTKELPTAELELKGMRAHLVGELDQGI 285

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +     + + + ++S  R +++   ++A+ R   G  L   P+  R +AD+ +  
Sbjct: 286 VTIAPLLNTTRIQTLLGTLSTWRRAISITKNFAKSRTTVGEPLWLIPMHLRLLADVEVKH 345

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYA-------------RIMAPITKYWCCKMAPAVIA 413
             A  L+F         ++ S  A +A             R++   +K    KM+   + 
Sbjct: 346 RGAINLAFFTIAVMGLIENPSSPARHAHMPRDPTEAKVVFRVLTATSKGVVSKMSMVGVQ 405

Query: 414 EAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E  E IGG GYI+E      +I+R  R +    I  G+ N +  +++  L KG NL
Sbjct: 406 ECQEAIGGVGYIDEPDEPEFNISRLLRSAAVYPIWEGTTNVLASELVRFLMKGDNL 461


>gi|119385593|ref|YP_916648.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376188|gb|ABL70952.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 592

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D       ++LA+  G   
Sbjct: 161 MNLTEPHAGTDLGLLRTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGE 220

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ L  EDGSP   N L    L+ K+G   NAT  + +    G+LLG+L+
Sbjct: 221 GTRGISLFIVPKFLVNEDGSPGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351
                +  M     +   +   S    +   A+ YAR     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARIGVGLQGYSVAEAAYQNAVAYARDRLQGRAVTGDANPSGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYWCCKMAP 409
            P ++R + D    +  A AL+F  A+  D A    ++ A+    ++ P+ K +      
Sbjct: 341 HPDIRRNLMDQKSFLEGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               +A +  GG GYIEE+ +++  R++    I  G+     LD++ 
Sbjct: 401 ETAVQAQQVFGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLVG 447


>gi|238482813|ref|XP_002372645.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220700695|gb|EED57033.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 637

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 204/477 (42%), Gaps = 56/477 (11%)

Query: 35  NAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD SL  AL    P+        +L  LGE  +S   +E +  A  + P +  +  
Sbjct: 23  NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L +     G+  S+    +EP    +   ++ A  YL +   
Sbjct: 83  WGQRYDYDRLITSEGWKQLGKWGARHGV-VSL---GYEPTYGAERRLVQYAVNYLYS--P 136

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKR 206
           +  L S  V+ +   AL+         A   F   Y    +K     TS   G  +TE+ 
Sbjct: 137 SSGLYSCPVSMSDGAALVLNQERKNVAADHPFQTAYQKLISKKEDYWTS---GQWMTERA 193

Query: 207 GGTDIAAIT--------SQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
           GG+D+            S   K S+G+    Y ++G K+F S+  ++  +MLA+   G++
Sbjct: 194 GGSDVQNTETWATYSPLSHRSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKL 253

Query: 254 GCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             FL P     + EDG P    NG+   RLKNK+G +   T ELE  +    L+G ++  
Sbjct: 254 STFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHG 313

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  +  +    + I S++  R +++    +A+ R   G  L   P+    +AD+ + 
Sbjct: 314 VMAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKVRTTVGEPLWLIPMHLSLLADLEVK 373

Query: 366 IAAATALSF------------RLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVI 412
              A  L+F             ++       ++ +EA    R +  I K    K A A I
Sbjct: 374 HRGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGKEAQVVFRALTAIAKAVISKNAIAGI 433

Query: 413 AEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            E  E +GG GY++E      +IAR  R +  NSI  G+ N +  +++  L K  NL
Sbjct: 434 QECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNL 490


>gi|317407384|gb|EFV87348.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 589

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T+ ++ AL+T  +P + + +   + S ++  T             + LTE + G+
Sbjct: 124 LCPLLTNGAVEALLTAGSPELRERFIGPMLSGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+ Q + DG Y +SG K F++    D       ++LA++    EG  G   FLV
Sbjct: 171 DLALLRSRAQPVGDGTYRISGTKIFITYGEHDLAENIIHLVLARLPDAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G+L+G  N     ++
Sbjct: 231 PKFLVNDDGSLGARNDVTCVSIEHKLGIKASPTATLQFGDAGGAIGYLVGQENRG---LD 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKRA 358
            M I++      + V G+ V+       LA A    + R V G       +I  P ++R 
Sbjct: 288 AMFIMMNAARFAVGVQGIAVADRAYQHALAYAAERVQSRPVDGSSRDAVPIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVI 412
           +  +     A  AL++  A   D A + ++ AA AR +A      PI K WC + +  V 
Sbjct: 348 LGTMRALTEAGRALAYYTAGHADLAHASADPAARARHLAVQEFLVPIVKGWCTEASIDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441


>gi|134101222|ref|YP_001106883.1| hypothetical protein SACE_4690 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007789|ref|ZP_06565762.1| hypothetical protein SeryN2_24959 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913845|emb|CAM03958.1| hypothetical protein SACE_4690 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 466

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 1/177 (0%)

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           A+ E+   + F   +G+L      + +M  +  L +A+ + + MR ++ E++ + RRR  
Sbjct: 2   ASGEVTLDDAFAVPVGELTNGFRQMAEMLNVSRLSNAMRAAALMRRAVLESVEHTRRRPA 61

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYW 403
            G  L DQP+M+  +  +  D  AA  L    A   D++ +  + A +  R++ P+ KY 
Sbjct: 62  FGKALFDQPLMRATLLPMITDAEAALGLVLESAARLDDSDAGDQAARSLIRVLTPLAKYK 121

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            CK A  +  EAME  GG+GYIE+    R  R++   SI  GS N + LDVL  + +
Sbjct: 122 VCKQARGITGEAMEIRGGNGYIEDWVNPRLLRDAHLGSIWEGSSNVIALDVLRCMRR 178


>gi|39933893|ref|NP_946169.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647740|emb|CAE26260.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 596

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  AL    +P   + + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++  K +DG Y ++G K F+S+    M+D  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ NG+    +++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFLVNPDGTVGARNGVMCGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355
               L  A+  ++   V+   A+ YAR     R +SG    D+P              + 
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A  +   TAL   +A+   +AK R     +  +M P+ K        A    A
Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQTADDHLGLMTPVLKGVLTDGGFANAVAA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI    + +  R++    I  G+     LD++ 
Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|192289313|ref|YP_001989918.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283062|gb|ACE99442.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 596

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  AL    +P   + + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++  K +DG Y ++G K F+S+    M+D  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ NG+    +++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFLVNPDGTVGARNGVMCGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355
               L  A+  ++   V+   A+ YAR     R +SG    D+P              + 
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A  +   TAL   +A+   +AK R     +  +M P+ K        A    A
Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQTADDHLGLMTPVLKGVLTDGGFANAVAA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI    + +  R++    I  G+     LD++ 
Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|71082955|ref|YP_265674.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762621|ref|ZP_01264586.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
 gi|71062068|gb|AAZ21071.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718423|gb|EAS85073.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 587

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 154/326 (47%), Gaps = 42/326 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++  + SDG + LSG K F++S    +++  I L         A  
Sbjct: 164 LTEPVCGTDLGLLKTKAIEQSDGTFKLSGQKIFITSGDQDLTENIIHLVIARAADSPAGT 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+ L  EDGS    NG+    +++K+G + +AT  L F +  G+++G   +
Sbjct: 224 KG-ISLFLVPKFLVNEDGSIGARNGVSTGSIESKMGIKGSATCVLNFDDATGYMIG---L 279

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILID 351
               +  M  ++ L+  ++ + G+ +S      ++ YA+ R                +I+
Sbjct: 280 KNKGLNAMFTMMNLERIVVGIQGLGISEIAYQNSLSYAKERKQGKTNNTKSTNGADFIIE 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              +++++ ++   I    AL F L+   +      + K + E +    +M P+ K    
Sbjct: 340 HADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDEKIKQEASDLVSLMTPVVKTMFS 399

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            M   + +EAM+  GG GY +++ I + YR++    I  G+ +    D++   L+ K  +
Sbjct: 400 DMGMEITSEAMQVHGGYGYTKDQGIEQLYRDNRITPIYEGTNSIQAADLVFRKLVNKNGD 459

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRD 489
           + ++    ++ D  +  +K+   +++
Sbjct: 460 IIDKYLELIKNDCSTENEKLKPFIKE 485


>gi|325092605|gb|EGC45915.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 556

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 57/357 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT---------SVAI--GLGLTEKRGG 208
           S  AL+T P    D A K+  R  +  N +   +          SVA   G  +TE++GG
Sbjct: 75  SSAALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNRLISRDPSVAWTSGQWMTERKGG 134

Query: 209 TDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--E 250
           +D+    +  +K+S                 G + L G KWF S+  ++  IMLA+   +
Sbjct: 135 SDVRGTETVARKLSTEEQNAGKGVDELGCPLGPWQLDGFKWFSSATDANMTIMLARTGPD 194

Query: 251 GRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G++  F  P  R +  G+      NG+  QRLKNK+G ++  T ELE     G+L+G   
Sbjct: 195 GQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGTKALPTAELELKGMRGYLIGKEG 254

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------- 353
                +  +  +  + +   +V G    LA +  YA+ R   G +L + P          
Sbjct: 255 DGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKVRIAGGRLLTELPAHVRALAREH 314

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCK 406
           VM R +  +A  +A+   +S    +S  +A   S       + +A  R++ P+ K     
Sbjct: 315 VMYRGLLHLAHFVASLLGISEGQDSSLTQATQVSILPTNAEQSSALLRLLTPMGKAQTAL 374

Query: 407 MAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   +   ME +GG GY+E      ++AR +R+    SI  G+ + M  D++ +++
Sbjct: 375 RSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVLSIWEGTTDIMADDLVRVMK 431


>gi|240279475|gb|EER42980.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 556

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 57/357 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT---------SVAI--GLGLTEKRGG 208
           S  AL+T P    D A K+  R  +  N +   +          SVA   G  +TE++GG
Sbjct: 75  SSAALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNRLISRDPSVAWTSGQWMTERKGG 134

Query: 209 TDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--E 250
           +D+    +  +K+S                 G + L G KWF S+  ++  IMLA+   +
Sbjct: 135 SDVRGTETVARKLSTEEQNVGKGVDELGCPLGPWQLDGFKWFSSATDANMTIMLARTGPD 194

Query: 251 GRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G++  F  P  R +  G+      NG+  QRLKNK+G ++  T ELE     G+L+G   
Sbjct: 195 GQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGTKALPTAELELKGMRGYLIGKEG 254

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------- 353
                +  +  +  + +   +V G    LA +  YA+ R   G +L + P          
Sbjct: 255 DGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKVRIAGGRLLTELPAHVRALAREH 314

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCK 406
           VM R +  +A  +A+   +S    +S  +A   S       + +A  R++ P+ K     
Sbjct: 315 VMYRGLLHLAHFVASLLGISEGQDSSLTQATQVSILPTNAEQSSALLRLLTPMGKAQTAL 374

Query: 407 MAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   +   ME +GG GY+E      ++AR +R+    SI  G+ + M  D++ +++
Sbjct: 375 RSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVLSIWEGTTDIMADDLVRVMK 431


>gi|4894856|gb|AAD32627.1|AF135399_1 AidB [Thermus thermophilus]
          Length = 447

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 13/292 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           +TE +GG+D+ A   +G +  +      G K+F S + ++D  ++ A+ EG       + 
Sbjct: 128 MTEIQGGSDLGANPHRGPQEGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLA 187

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+PRL  +G  N    +RLK K G R+  + E+E   +  +L+G          +   
Sbjct: 188 LFLLPRLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSERYLIGRAEEGIYYTLETLT 246

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L +AI ++     +L E     RRR   G  L D P+++  + D+++  A   AL+ 
Sbjct: 247 VSRLANAIAAMGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALAL 306

Query: 375 RLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +FD A       +    + R ++ + K    + +  +   AME  GG G++EE ++
Sbjct: 307 AAVEAFDRAWHERPLTARPTTWPRFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAV 366

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           AR +RES    I  G  N   LD+L  ++K         + LE  L   G++
Sbjct: 367 ARWHRESLITPIWEGPSNIQALDLLEAMQK-KGAHRPFLAWLEARLKGRGEE 417


>gi|213024630|ref|ZP_03339077.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 120

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TAL FRLA ++ E +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  
Sbjct: 2   TALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESE 60

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           + R YRE P NSI  GSGN M LDVL +L K   +++ L
Sbjct: 61  LPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVL 99


>gi|237653153|ref|YP_002889467.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|237624400|gb|ACR01090.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 595

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 61/337 (18%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E+  T             + LTE + G+D+AA  ++ +  +DG Y L G 
Sbjct: 148 RTWLPKVVSGEWGST-------------MNLTEPQAGSDLAATRTRAEPQADGSYKLFGQ 194

Query: 232 KWFLS------SPMSDAFIML------AQVEGRVGCFLVPRLLED-----GSPNGLCYQR 274
           K F+S      +P     ++       A V+G +  F+VP+ L +     G+ N +    
Sbjct: 195 KIFISYGEHELTPNIVHLVLARLPDAPAGVKG-LSLFIVPKFLVEPDGSLGARNDVRCIS 253

Query: 275 LKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +++K+G   + T  L F       G+L+G+ N     +E M   + ++ A   V     +
Sbjct: 254 IEHKMGIHGSPTCTLSFGEGGGAIGWLVGEPNRG---LEVM--FVMMNEARFGVGVQGAA 308

Query: 332 LAE-----AIHYARRR--------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           LAE     A+ YAR R          +G  ++  P +KR +  +   + A   L +  A 
Sbjct: 309 LAERAYQMALGYARERVQGRDAVSGAAGRPILCHPDVKRMLLSMRARVMAMRTLLYTAAG 368

Query: 379 SFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FD A    + A       Y  ++ P+ K WC ++   V  EA++  GG G++EE  +A+
Sbjct: 369 WFDIAHHHPDAAVADKHRRYVDLLMPVAKGWCTELGNDVCDEAIQVFGGMGFVEETGVAQ 428

Query: 433 HYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE 466
           H+R++   +I  G+      D++    L E G  L E
Sbjct: 429 HFRDARIITIYEGTTGIQANDLVGRKILREGGATLRE 465


>gi|169766142|ref|XP_001817542.1| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
 gi|83765397|dbj|BAE55540.1| unnamed protein product [Aspergillus oryzae]
          Length = 637

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 203/477 (42%), Gaps = 56/477 (11%)

Query: 35  NAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD SL  AL    P+        +L  LGE  +S   +E +  A  + P +  +  
Sbjct: 23  NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L +     G+  S+    +EP    +   ++    YL +   
Sbjct: 83  WGQRYDYDRLITSEGWKQLGKWGARHGV-VSL---GYEPTYGAERRLVQYTVNYLYS--P 136

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKR 206
           +  L S  V+ +   AL+         A   F   Y    +K     TS   G  +TE+ 
Sbjct: 137 SSGLYSCPVSMSDGAALVLNQERKNVAADHPFQTAYQKLISKKEDYWTS---GQWMTERA 193

Query: 207 GGTDIAAIT--------SQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
           GG+D+            S   K S+G+    Y ++G K+F S+  ++  +MLA+   G++
Sbjct: 194 GGSDVQNTETWATYSPLSHKSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKL 253

Query: 254 GCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             FL P     + EDG P    NG+   RLKNK+G +   T ELE  +    L+G ++  
Sbjct: 254 STFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHG 313

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  +  +    + I S++  R +++    +A+ R   G  L   P+    +AD+ + 
Sbjct: 314 VMAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKARTTVGEPLWLIPMHLSLLADLEVK 373

Query: 366 IAAATALSF------------RLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVI 412
              A  L+F             ++       ++ +EA    R +  I K    K A A I
Sbjct: 374 HRGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGKEAQVVFRALTAIAKAVISKNAIAGI 433

Query: 413 AEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            E  E +GG GY++E      +IAR  R +  NSI  G+ N +  +++  L K  NL
Sbjct: 434 QECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNL 490


>gi|163795812|ref|ZP_02189776.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159178845|gb|EDP63381.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 597

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 66/391 (16%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T A++ AL  + T      + PK+ + E+  T             + LTE + GT
Sbjct: 125 LCPLLTQAAIDALREVGTDEQKATYLPKLVTGEWTGT-------------MNLTEPQAGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA------QVEGRVGC--FLV 258
           D+ AI ++ +K+ DG Y L G K F++      +D  I L        + G  G   ++V
Sbjct: 172 DLGAIRTRAEKVDDGSYRLRGQKIFITYGDHDFTDNIIHLVLARSPDGIAGTKGLSLYIV 231

Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGP 308
           P+ L +  P+G    R       L++K+G  ++ T  + +    G   +L+G+ N     
Sbjct: 232 PKFLVN--PDGSLGARNDAKPLSLEHKLGIHASPTCIMAYGENEGAVAYLVGEENRG--- 286

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVM 355
           +E M   I +++A ++V    +++AE     A  +AR R  S  +        +I  P +
Sbjct: 287 IEYM--FIMMNNARLAVGLQGLAVAERAYQQAADFARTRVQSRAVQGSTGSVSIIHHPDV 344

Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  +   I A   L + +A   D      +A +R+   A   ++ P+ K WC   A 
Sbjct: 345 RRMLLTMKAQIEAMRGLIYDVAAGIDIADRHPDAATRAGAQARVDLLIPVVKAWCTDTAI 404

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
            + +  ++  GG G+IEE   A+HYR++    I  G+     LD++   +   G    + 
Sbjct: 405 EICSTNVQVHGGMGFIEETGAAQHYRDARITPIYEGANGVQALDLIGRKVARDGGAAMQG 464

Query: 468 LFSTLEQDLG--SSGKKVITILRDSISLCKE 496
             + ++  LG  +     + I+RD ++  +E
Sbjct: 465 FLADVDATLGALADADAPLAIIRDRLASGRE 495


>gi|110680588|ref|YP_683595.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           denitrificans OCh 114]
 gi|109456704|gb|ABG32909.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           denitrificans OCh 114]
          Length = 564

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 41/303 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ + E+  T             + LTE + G+D+ A++S+ Q   DG Y ++G K ++
Sbjct: 150 PKLIAGEWTAT-------------MNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIYI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S    D       ++LA++         +  FLVP+ + +     G+ N +    L++K+
Sbjct: 197 SWGDHDVADNICHLVLARLPDAPAGTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA---- 335
           G   + T  +++    G+L+G      G +  M     +++A + V G    +AEA    
Sbjct: 257 GLHGSPTAVMQYDGATGWLVG---AKEGGMAAM--FTMMNNARLGVGGQGTGVAEAAYQH 311

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAY 392
            + YAR R      ++D   ++R +  +  DI AA A+    A + D   A   ++  A 
Sbjct: 312 ALSYARERKQGKSAIVDHADVRRMLGTMKADIYAARAIGLSCAVAIDMAHATGSADWQAR 371

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++ PI K +      AV    ++  GG G++EE   A++ R+    +I  G+     +
Sbjct: 372 AALLTPIAKAFGSDTGIAVADAGIQVHGGMGFVEETGAAQYSRDVRVTAIYEGTNGIQAM 431

Query: 453 DVL 455
           D++
Sbjct: 432 DLV 434


>gi|115522699|ref|YP_779610.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516646|gb|ABJ04630.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 596

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 47/315 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + GTD+  + ++  K +DG Y ++G K F+
Sbjct: 152 PKMVSGEWTGT-------------MNLTEPQCGTDLGLLRAKAVKQADGSYKITGTKIFI 198

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           S+   D       ++LA++EG       V  F+VP++L  EDGS    NG+    L++K+
Sbjct: 199 SAGDHDLTENIIHLVLARIEGAPAGIKGVSLFVVPKVLVNEDGSLGERNGVTCGALEHKM 258

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  L + N  G+L+G+ N     +  M     L  A+  ++   V+   A+ YA
Sbjct: 259 GIHGNATCVLNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVIYA 318

Query: 340 RRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFD 381
           + R     ++G    D+P              +  RA  + A      TAL   +++  D
Sbjct: 319 QERLQGRSLTGAKATDKPADPIIVHPDIRRTLLTIRAFNEAARAFVIWTALKGDISHRSD 378

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +AK R     +  +M PI K     +  A    A +  GG GYI +  + +  R++    
Sbjct: 379 DAKERQAADDHMGLMTPILKGVLTDIGFANAVSAQQVWGGHGYIADNGMEQFVRDARIAM 438

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     LD++ 
Sbjct: 439 IYEGANGIQALDLVG 453


>gi|167045703|gb|ABZ10350.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine bacterium HF4000_APKG2098]
          Length = 541

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 42/301 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249
           LTE   GTD+  + ++  +  DG + LSG K F++S   D       ++LA+       +
Sbjct: 164 LTESVCGTDLGLLKTKAVEQPDGTFKLSGQKIFITSGDHDLTENIIHLVLARTPEAPPGI 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP++   EDGS    NG+    +++K+G R +AT  L F    G ++G  N 
Sbjct: 224 KG-ISLFLVPKIQVKEDGSLGPRNGVSTGSIESKMGIRGSATCVLNFDGAVGHIIGPKNK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVS----------GGILID 351
               +  M  ++ L+  ++ + G+    ++   A++Y++ R               ++ID
Sbjct: 283 G---LSSMFTMMNLERIVVGIQGLGLSEIAYQNALNYSKERKQGKSNSSKTKNGADLIID 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              ++R++ ++   I    ALSF LA   +      + K + E      +M P+ K    
Sbjct: 340 HADIRRSLLNMKSIIEGERALSFWLAQQTEVSLHHKDNKIKEEALDLVSLMTPVVKSLFT 399

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            M   + ++AM+  GG GY +++ I + YR++    I  G+ +   +D++   L  K  N
Sbjct: 400 DMGMEITSDAMQIFGGYGYTKDQGIEQLYRDNRITPIYEGTNSIQSIDLVFRKLFNKDRN 459

Query: 464 L 464
           +
Sbjct: 460 I 460


>gi|327355369|gb|EGE84226.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 622

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 188/473 (39%), Gaps = 69/473 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  PS + ++L      VLS +       A  N P L      G     D +     W
Sbjct: 35  LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R I +G+           +    A               A   +  ++ ++S  A
Sbjct: 95  RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212
           L+T P    D A K+  R  +  + A   +    +           G  +TE++GG+D+ 
Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARNRLISRDPSFAWTSGQWMTERKGGSDVR 204

Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254
              + G+K+S                 G + L G KWF S+  ++  IMLA+    G++ 
Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264

Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            F  P  R +  G+      NG+  QRLKNK+G ++  T ELE     G+L+G       
Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360
            +  +  +  + +   +V G    LA +  YA+ R   G +L + P   RA+A       
Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384

Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410
              ++   +A+   +S    +S  +A   S       +  A  R++ P+ K      +  
Sbjct: 385 GHLNLLHFVASILGISEGQDSSLTQATQASILPTNAQQSGALLRLLTPMGKAQTALRSIN 444

Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   ME +GG GY+E      +IAR +R+    SI  G+ + M  D++ +++
Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497


>gi|217970666|ref|YP_002355900.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217507993|gb|ACK55004.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 598

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 163/336 (48%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +TS ++ ALM   T      + PK+ + E+  T             + LTE   G+
Sbjct: 125 LCPMLTSGAIEALMLRGTDEQKNLYLPKMIAGEWTGT-------------MNLTEPNAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++     ++D  I  +LA++    EG  G   F+V
Sbjct: 172 DLAAVRTKAEPQGDGTYKIFGQKIFITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVV 231

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ + +     G+ N +    +++K+G  ++ T  L F +     G L+G+ N     +E
Sbjct: 232 PKFMVNADGSLGARNDVHCVSIEHKLGIHASPTAVLAFGDKGGAIGTLVGEPNRG---LE 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGGILID---QPVMK 356
            M   I ++ A  +V    ++L+E     A+ YA+ R       V GG  ++      ++
Sbjct: 289 YM--FIMMNEARFAVGMEGLALSERSYQHALQYAKDRIQGTDAGVRGGPKVNILHHADVR 346

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPA 410
           R + ++     A  AL++ +  +FD+A   ++EA      A+  +M P+ K WC + +  
Sbjct: 347 RLLMNMKSKTEAMRALAYVVGAAFDKAHHHADEAVRAQNQAFVDLMIPVVKGWCTENSID 406

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V ++ ++  GG G+IEE   A+H+R+S   +I  G+
Sbjct: 407 VTSDGVQVHGGMGFIEETGAAQHFRDSRITTIYEGT 442


>gi|258576001|ref|XP_002542182.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902448|gb|EEP76849.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 524

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 59/331 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDA 242
           G  +TE++GG+D+    +  +K+S       DG+         + + G KWF S+  ++ 
Sbjct: 108 GQWMTERKGGSDVRGTETVARKLSAAEKSESDGVDANSLPLGPWRIDGFKWFSSATDANM 167

Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNT 294
            I+LA+   +G V  F  P  R ++ G+     NG+  QRLKNK+G +   T ELE    
Sbjct: 168 TILLAKTSQDGAVSAFYAPLRRRVKGGNGETELNGIRIQRLKNKLGTKPVPTAELELKGM 227

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G        +  +  +  L +AI            A  YA+ R V   +L+D P 
Sbjct: 228 RAYLIGKEGQGVKEISTLLNITRLQNAI------------AAAYAKVRMVRNTLLMDMPA 275

Query: 355 MKRAIADIALDIAAATALSFRLAN--SFDEA---------------KSRSEEAAYARIMA 397
             R +A   +  AA   L+F LA      E                +++ E  A  R++ 
Sbjct: 276 HVRKLAQDYVKYAANMHLTFLLAALLGLSEGQDSGPTPAARANIVPQTQREAQALLRLLT 335

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLD 453
           P+ K      A   +   ME +GG GY+E      +IAR +R+S   SI  G+ + M  D
Sbjct: 336 PMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDSCVLSIWEGTTDIMADD 395

Query: 454 VLNLLE--KGTNLFEQLFSTLEQDLGSSGKK 482
           ++ + +  +G+     L + +   LG++  K
Sbjct: 396 LIRVAKGREGSECLAVLGAWVSNVLGAADSK 426


>gi|115374699|ref|ZP_01461976.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|310822702|ref|YP_003955060.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115368270|gb|EAU67228.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309395774|gb|ADO73233.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 614

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 194/435 (44%), Gaps = 74/435 (17%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLE-------AGHLMSPSVT--SASMVALMTTPR 169
           ++++ F+ V   Q H  + A + L   +E       A   M P +   +A ++A   TP 
Sbjct: 89  LYEQGFKTVGVSQEHGGQGAPMMLQMAVEEMLCGANAAFNMYPGLAYGAAELIAECGTPE 148

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  ++ +  +  T             + LTE + G+D+ A  +  ++ +DG Y + 
Sbjct: 149 QKHHYVERMLNGTWGGT-------------MCLTEPQAGSDVGAAKTTARRNADGTYNIR 195

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR-VGC-----FLVPRLL--EDGSP---NGLCYQ 273
           G K F+S+   D       ++LA+VEG  VG      F+VP+L   +DGS    N +   
Sbjct: 196 GTKIFISAGDHDLAENIIHLVLARVEGAAVGTKGLSLFIVPKLRINKDGSAGPSNDVALG 255

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G   ++T  L F       +G+L      V   ++   ++ A ++V    V+LA
Sbjct: 256 SIEHKMGINGSSTCVLNFGENDA-CVGELVGGVEHVGMSQMFKMMNGARIAVGIQGVALA 314

Query: 334 -----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRL 376
                 A+ YA+ R   G              +I+ P ++R + +I   +    AL F+L
Sbjct: 315 SAAYFNALDYAKERKQGGSFTKWKDPASPRVPIIEHPDVRRMLLEIKSHVEGIRALIFKL 374

Query: 377 ANSFDEAKS----RSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A   D+AK       ++AAY R    ++ P+ K +    A  + A+A++  GG+G+ ++ 
Sbjct: 375 AMHTDKAKQLAGKDDDKAAYHRGQVEVLTPLVKAYGSDQAFRLCAQAIQIYGGAGFCQDY 434

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            + ++ R+S   SI  G+ +   +D++   L + G   F+Q      +D+G      I  
Sbjct: 435 PVEQYCRDSKIFSIYEGTNHIQAMDLVGRKLGQAGGANFQQFM----EDVGG----FIEA 486

Query: 487 LRDSISLCKEDKGLA 501
            RD  +   E K LA
Sbjct: 487 NRDHKTFGTEVKVLA 501


>gi|254465242|ref|ZP_05078653.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
 gi|206686150|gb|EDZ46632.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
          Length = 593

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 50/356 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  + ++ +  +DG + +SG K F+SS   D       ++LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSFRISGQKIFISSGDHDMAENIVHLVLAKIPGGPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L  EDGS    NG+   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFLVNEDGSLGERNGVSVGKIEEKMGIHGNSTCVMNYDGAVGYLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351
                +  M     +   +  ++    +   A+ YA+ R     V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARVGVGMQGLAQAEAAYQNALEYAKDRLQGRDVTGAKNPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R++ D       A A     A   D+A    ++ A   I  M P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFAEGARAFLLWGATLIDQAHRAGDKDADGLISLMTPVIKGFLTDQGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +  +A +  GG GYIEE  ++++ R++    I  G+     LD++              
Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKI--ALASSAAALYRAGM 522
               + LG  G K +    D + S C+E+K ++   T+     L +++  L  AGM
Sbjct: 448 ----RKLGQHGGKYVLAFFDMVKSFCQENKDISEDYTKDFIKPLQAASKDLQAAGM 499


>gi|312114716|ref|YP_004012312.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219845|gb|ADP71213.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 597

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 181/419 (43%), Gaps = 68/419 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T A + AL+   +  +   + PK+ S E+       MQ         LTE + G+
Sbjct: 124 LNPLLTQAGVHALIAHGSEPLQTQYLPKLISGEW----TGSMQ---------LTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVE------GRVGC--FLV 258
           D+  + ++   + DG Y L+G K F++    PM+D  I L          G  G   F+V
Sbjct: 171 DLRFLKTRATPVGDGTYKLTGTKIFITYGEHPMTDNIIHLVLARMPDAPFGTKGISLFVV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ + +     G  N +   +L++K+G   + T  + F +     G+L+G+ N     + 
Sbjct: 231 PKFIPNADGSLGERNDVMAAKLEHKLGIHGSPTCVMNFGDRGGATGWLVGEPNGGLKAMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGGI------LIDQPVMKRAIA 360
            M     L   I  V     +  +A+ YAR R      SGG       +I+ P + R + 
Sbjct: 291 TMMNEARLGVGIQGVGIGERAFQQALDYARDRRQGAPESGGAADASVAIIEHPDVVRMLL 350

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++    +AA A+++  + + D      +A  R   A  A ++ PI K           +E
Sbjct: 351 NMKSKTSAARAIAYTTSVAIDISHRAADASERKRAANEAALLTPIAKAVSTDFGVETASE 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
            ++  GG G+IEE   A+HYR++    I  G+     +D++   L   G   F +  + L
Sbjct: 411 GIQVHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVTRKLPLAGGETFREFLAGL 470

Query: 473 EQ-----------DLGSSGKKVITILRDSISLCKEDKG-LARFLTEKIALASSAAALYR 519
           ++            LG +G+     L +SI+  +E  G L R L E  A A + A  ++
Sbjct: 471 KETAREVASSNDDGLGHTGE----CLWESITALEETGGWLTRQLAENRAAALAGATPFQ 525


>gi|86137376|ref|ZP_01055953.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85825711|gb|EAQ45909.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 593

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 147/338 (43%), Gaps = 45/338 (13%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M   +T  +  A++   T +    + PK+ S E+  T             + LTE   G
Sbjct: 123 VMYQGLTHGAAAAILAHGTDQQKDTYLPKMVSCEWTGT-------------MNLTEPHCG 169

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++ +   DG Y +SG K F+S+    M+D  I  +LA++ G       V  F+
Sbjct: 170 TDLGLMRTKAEPQDDGSYKVSGQKIFISAGDHDMADNIIHLVLAKIPGGPDGIKGVSLFI 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ +  EDG+P   NG+    ++ K+G   N+T  + +    G+LLGD +     +  M
Sbjct: 230 VPKFVLNEDGTPGPRNGVSVGNIEKKMGIHGNSTCVMNYDEATGYLLGDAHKGMRAMFTM 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIA 360
                L   +  VS    +   A+ YA+     R V+G          LI  P ++R++ 
Sbjct: 290 MNEARLGVGMQGVSQAEAAYQNAVEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRSLM 349

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMEC 418
           D    +    A     +   D+A     + A     ++ P+ K +       +  +A + 
Sbjct: 350 DQKSFVEGGRAFLLWGSTMIDQAHRDGNKDADGLVSLLTPVIKGFLSDEGYDMTVKAQQV 409

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 410 YGGHGYIEEHGMSQYTRDARIAQIYEGANGVQALDLVG 447


>gi|254476967|ref|ZP_05090353.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
 gi|214031210|gb|EEB72045.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
          Length = 568

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 35/321 (10%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ + + DG Y +SG K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPLDDGTYAISGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVP+ L D     G  N L    L++K+
Sbjct: 197 SWGDNDFTQNVCHLVLARLPDAVPGTKGISLFLVPKFLPDAEGNPGKANSLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+++G        +  M     L      V     +  +A+ YA
Sbjct: 257 GLHGSPTCVMQYDGAIGWMVGKPGGGLAAMFTMMNNARLGVGGQGVGVAGAAYQKALAYA 316

Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R     + G ++D   ++R + ++  D+ AA A+    + + D   A    + AA A 
Sbjct: 317 LERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATGAQDWAARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI K +  +    V    ++  GG G+IEE   A+ YR+    +I  G+     +D+
Sbjct: 377 FLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDL 436

Query: 455 LNL-LEKGTNLFEQLFSTLEQ 474
           +   +  G ++  +L   +E+
Sbjct: 437 VGRKMMDGGDMAHRLIDEIEE 457


>gi|121713392|ref|XP_001274307.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus
           clavatus NRRL 1]
 gi|119402460|gb|EAW12881.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus
           clavatus NRRL 1]
          Length = 643

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 201/495 (40%), Gaps = 91/495 (18%)

Query: 35  NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD+ L  ++A + PS +++ ++     LGE  +S   +E +  A  N P + +Y  
Sbjct: 22  NTYTSDATLHRVLAWYLPSDINQSIQPNLTQLGEEAISPQIREWSADAERNQPYVKSYNV 81

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L R     G+    ++ ++    R             + Q  
Sbjct: 82  WGQRYDYDRLVTSEGWKQLGRWGARHGVVAIGYEPTYGASRR-------------LVQYA 128

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI--------- 198
             +L SPS    S  A MT      D A  I S++    +  P      A+         
Sbjct: 129 VNYLYSPSSGLTSCPAAMT------DGAALILSQQLQ-QHSYPADHPFRAVYARLISRTE 181

Query: 199 -----GLGLTEKRGGTDIAAITSQGQ------------KISDGIYCLSGHKWFLSSPMSD 241
                G  +TE+ GG+D+    +                +SDG Y ++G K+F S+  ++
Sbjct: 182 DCWTSGQWMTERAGGSDVQNTETWATYSPLPSSSSSSDALSDGAYTINGFKFFSSATDAN 241

Query: 242 AFIMLAQVE--GRVGCFLVP--RLLEDGSP------------NGLCYQRLKNKIGNRSNA 285
             ++LA+    G++  FL P  R +   +P            NG+   RLKNK+G +   
Sbjct: 242 VTLLLAKTSPSGKLSTFLAPLRRTIPIPAPTNPQTTTTKQVANGVRIHRLKNKLGTKELP 301

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T ELE       L+G+       +  +  +    + I S+   R +L+ A  +AR R   
Sbjct: 302 TAELELHGMRAHLVGEPEKGVATIAPLLNVTRTHTFIGSLGAWRRALSIAKAFARARSTV 361

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYA----- 393
           G  L   P+  R +A++     AA  + F        + N  D  +  +  AA+      
Sbjct: 362 GEPLWLIPMHLRLLAELEARHRAALQVGFFTVAVMGAVENPADGGEGSARPAAHVPRGRE 421

Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSIL 443
                R +    K    KMA   I E  E +GG GY++E      ++AR  R +  NSI 
Sbjct: 422 ATVVFRALTAAAKAVVSKMAVLGIQECQEALGGVGYMDEADEPEFNVARLLRNTAVNSIW 481

Query: 444 LGSGNAMVLDVLNLL 458
            G+ N +  +++  L
Sbjct: 482 EGTTNVLASELVRFL 496


>gi|56479154|ref|YP_160743.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56315197|emb|CAI09842.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 597

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 179/399 (44%), Gaps = 63/399 (15%)

Query: 91  GERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           G +WD  KV   P W    R+    G      D  +      +        ++  A +  
Sbjct: 64  GAKWDHGKVTTAPGWKEAYRQFSEAGWTAVAGDPEYGGQGLPKLLSTAVMEMWKAANM-- 121

Query: 149 GHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              + P +T+ ++  VAL  +      + PK+ S E+  T             + LTE +
Sbjct: 122 AFSLCPMLTNGAIEAVALRGSDEQKAAYLPKMISGEWTGT-------------MNLTEPQ 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255
            G+D+AA+ ++ +   DG Y L G K F++    D       ++LA++    EG  G   
Sbjct: 169 AGSDLAAVRTRAEPQGDGTYRLFGQKIFITYGEHDLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
           F+VP+ L   DG+P   N +    +++K+G  ++ T  L F ++    G L+G+ N    
Sbjct: 229 FVVPKFLLNADGTPGERNDVQCVSIEHKLGIHASPTCVLAFGDSGGAIGTLVGEANRG-- 286

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGG---ILIDQP 353
            +E M   I ++ A  +V    ++L+E     A+ YA+ R       V GG    ++  P
Sbjct: 287 -LEYM--FIMMNEARFAVGMEGLALSERAYQHALAYAKDRVQGTEAGVRGGPKVSILHHP 343

Query: 354 VMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +     A  AL++       LA+   +A  R+++ A+  +M P+ K WC + 
Sbjct: 344 DVRRMLMSMKSQTEAMRALAYVVGAATDLAHRHPDAAVRAQKQAFVDLMIPVVKGWCTEN 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  + +  ++  GG G+IEE   A+H R++   +I  G+
Sbjct: 404 SIDIASTGVQVHGGMGFIEEAGAAQHLRDARITTIYEGT 442


>gi|163742451|ref|ZP_02149838.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161384401|gb|EDQ08783.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 590

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 36/290 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR-- 252
           + LTE + G+D+  +  + +  +DG Y +SG K F++     +S+  I  +LA+  G   
Sbjct: 161 MNLTEPQAGSDLGRVRCKAEPRADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPD 220

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ L  +DG+P   N +    +++K+G R++ T  LE+ N  G+L+G+ N
Sbjct: 221 GHRGLSLFLVPKFLVDQDGTPGDRNSVNCVSIEHKLGVRASPTAVLEYDNATGYLIGEEN 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LID 351
                +E M  ++      + V G+ VS      A+ YA+ R     I         +I 
Sbjct: 281 RG---LEYMFTMMNAARFAVGVQGVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIG 337

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCK 406
            P ++R +  +   +    +LS   A   D +++     R+E A  A  + P+ K +C +
Sbjct: 338 HPDVRRMVLRMRALVEGGRSLSMAAAGWLDLSQNGDDDIRAETAPVAEFLVPLVKAFCSE 397

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            A  V +  ++  GG G+IEE  +A+ YR++    I  G+      D+L 
Sbjct: 398 RAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLG 447


>gi|282857316|ref|ZP_06266553.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455]
 gi|282584816|gb|EFB90147.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455]
          Length = 377

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 27/264 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
            GLTE   G+D AAI S  +K  DG Y L+G K W  +S ++D ++++A+ +   G    
Sbjct: 119 FGLTESNAGSDAAAIKSVAEKQPDGGYILNGSKAWITNSGVADYYLIMAKTDPAAGNHGI 178

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+  E     GL   + + K+G R  AT EL F N    L  D  V       M 
Sbjct: 179 SVFVVPKDAE-----GLTVGKFEKKMGMRGTATCELSFDNVR--LPADSLVGDEGKGFMI 231

Query: 314 ILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD A +S+       M+ ++ +A  YAR R   G  +     +    AD+A  I A
Sbjct: 232 AMQALDGARISIGAIASGLMQHAMDKAAAYARERTTFGKPIARHQAVGFKFADMAAKIRA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              + +       + K  S EAA  +++A     W C+    V  + ++  GG+GY  E 
Sbjct: 292 TDLMVWDTCELKRQGKRFSVEAAELKLLAS---RWACE----VCDDCIQIFGGNGYSAEF 344

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            + R YR+  A  + +G G + +L
Sbjct: 345 DVERFYRD--AKLLEIGEGTSEIL 366


>gi|163739943|ref|ZP_02147349.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
 gi|161386817|gb|EDQ11180.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
          Length = 590

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 36/290 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR-- 252
           + LTE + G+D+  +  + +  +DG Y +SG K F++     +S+  I  +LA+  G   
Sbjct: 161 MNLTEPQAGSDLGRVRCKAEPRADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPD 220

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ L  +DG+P   N +    +++K+G R++ T  LE+ N  G+L+G+ N
Sbjct: 221 GHRGLSLFLVPKFLVDQDGTPGDRNSVNCVSIEHKLGVRASPTAVLEYDNATGYLIGEEN 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LID 351
                +E M  ++      + V G+ VS      A+ YA+ R     I         +I 
Sbjct: 281 RG---LEYMFTMMNAARFAVGVQGVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIG 337

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCK 406
            P ++R +  +   +    +LS   A   D +++     R+E A  A  + P+ K +C +
Sbjct: 338 HPDVRRMVLRMRALVEGGRSLSMAAAGWLDLSQNGDDDIRAETAPVAEFLVPLVKAFCSE 397

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            A  V +  ++  GG G+IEE  +A+ YR++    I  G+      D+L 
Sbjct: 398 RAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLG 447


>gi|119383188|ref|YP_914244.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119372955|gb|ABL68548.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 563

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 32/299 (10%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+T++ ++  DG Y ++G K F+
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALTTKAERAEDGSYRVTGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279
           +   SD       ++LA++ +G  G      F+VP+ + D     G  N L    L++K+
Sbjct: 197 TWGDSDVTENVCHLVLARLPDGAAGTRGISLFMVPKFIPDEAGRPGIANDLRVVSLEHKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  + F    G+L+G+ +     +  M     L   +  V+    +L +A+ YA
Sbjct: 257 GIHGSPTCVMSFEGAKGWLVGEEHKGMAAMFTMMNAARLGVGVQGVAQAEAALQQAVAYA 316

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMA 397
             R V  G +I  P ++R +A+   ++ AA A+    A + D A++   E  AA A  + 
Sbjct: 317 AER-VQMGPIIRHPDVRRMLAESRAEVFAARAICLGCAVALDMARATGSEEWAARAAFLT 375

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           PI K     +   V   A++  GG GYIEE   A++ R+    +I  G+     +D++ 
Sbjct: 376 PIAKAHGTDVGIRVADTAVQVHGGMGYIEETGAAQYLRDVRITAIYEGTNGIQAMDLVG 434


>gi|163745662|ref|ZP_02153022.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161382480|gb|EDQ06889.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 575

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 49/331 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y +SG K ++
Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSRAEDNGDGTYAVSGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKI 279
           S   +D       ++LA++ G       +  FLVP+ +  E+G P   NG+    L++K+
Sbjct: 197 SWGDNDFAGNVCHLVLARLPGAPAGTKGISLFLVPKFIPDENGEPGQRNGVSVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           G   + T  +++    G+++G             +   +++A + V    +  AE     
Sbjct: 257 GLHGSPTAVMQYDKATGWMIGREGGGMA-----AMFTMMNNARLGVGEQGIGAAEGAYQL 311

Query: 335 AIHYARRRHV------SG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+ YA  R        SG G ++D   ++R +  +  DI A+ A++   A + D A++  
Sbjct: 312 ALDYALERKQGRSPVESGTGTIVDHADVRRMLLSMKADIFASRAIALSCAYASDMARAGQ 371

Query: 388 --EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E AA A  + PITK +   +  +V    ++  GG G+IEE   A+  R+    +I  G
Sbjct: 372 GDEWAARAAFLTPITKAFGTDVGMSVAEMGVQVHGGMGFIEETGAAQFSRDVRVTAIYEG 431

Query: 446 SGNAMVLDVLNL-LEKGTNLFEQLFSTLEQD 475
           +     +D++   +  G     +L   +E D
Sbjct: 432 TNGIQAMDLVGRKMMDGGEAANRLLDEIEAD 462


>gi|170741462|ref|YP_001770117.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195736|gb|ACA17683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 597

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 169/405 (41%), Gaps = 61/405 (15%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M P +T  +M AL+    VH   A K   R Y P     M + S    + LTE   GTD+
Sbjct: 126 MYPGLTQGAMAALL----VHGTDAQK---RTYLPR----MIEGSWTGTMNLTEPHCGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260
             + ++     DG Y L+G K F+S+   D       ++LA++EG       +  F+VP+
Sbjct: 175 GLLKTRAVPNPDGSYSLTGTKIFISAGEHDLSENIIHLVLARIEGAPAGTKGISLFVVPK 234

Query: 261 LLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           LL +G     + NG+    +++K+G  +NAT  + +    G+L+G+ N     +  M   
Sbjct: 235 LLVNGDGSLGARNGVSCGSIEHKMGIHANATCVMNYDGAKGWLVGEANRGLNAMFVMMNE 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VMKR 357
             L   I  ++   V+   A+ YA+ R     ++G    D+P              +  R
Sbjct: 295 ARLAVGIQGLALSEVAYQNAVAYAKERLQGRALTGAKAPDKPADPIIVHPDVRRTLLSIR 354

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A  +    +   TAL   +A+   +A  R     +  +M P+ K        A   +A +
Sbjct: 355 AFNEAGRALVLWTALQADVAHRSGDAAERQAADDHMGLMTPVVKGVLTDRGFANAVDAQQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GYIEE  +++  R++    I  G+     +D++                L +D  
Sbjct: 415 MFGGHGYIEEWGMSQFVRDARIAQIYEGANGIQAMDLVG-------------RKLPRD-- 459

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
             G+ ++  L++    CKE+       T    LA +   L +A M
Sbjct: 460 -GGRAMMRFLQEVEGFCKENGADETLKTYTAPLAKALGDLQKATM 503


>gi|108760804|ref|YP_634058.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108464684|gb|ABF89869.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 395

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 30/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GR----VGC 255
           LTE   G+D+A + +  +   D  Y L+G K F+++   +  + + A V+ G+    + C
Sbjct: 141 LTEPEAGSDVANMQTTARLDGDH-YVLNGAKCFITNGGQASQYTVFATVDKGKKHKGITC 199

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           F+V     +G P GL   + +NK+G R++ TV L F       +N  G       ++   
Sbjct: 200 FVV-----EGRPEGLSVSKHENKMGQRASETVSLTFEDVRVPVANRIGEEGQGFAIAMAT 254

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +++ + L    +A+ SV   R +L  ++ Y+ +R   G  +I+   ++  IAD+A++  A
Sbjct: 255 LDNSRPL----TAMFSVGIARAALEHSMEYSTQRRTFGKPIIEHQAIQFMIADMAMNTHA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE K  S +++YA+  A         MA  V  +A++  GG GYI+E 
Sbjct: 311 ARMLTYESAWLLDEGKRNSLQSSYAKCFA-------ADMAMKVATDAVQVYGGYGYIKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +  R++    +  G+     L +   L K
Sbjct: 364 PVEKLMRDAKLIQVYEGTSQVQRLVIARELFK 395


>gi|84683803|ref|ZP_01011706.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84668546|gb|EAQ15013.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 592

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 152/345 (44%), Gaps = 41/345 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   GTD+  + ++ +   DG Y +SG K F+S+    MS+  I  +LA++ G   
Sbjct: 161 MNLTEPHSGTDLGLMRTKAEPQEDGTYKISGQKIFISAGDHDMSENVIHLVLAKIPGGPD 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L  EDGS    NG+    L+ K+G   NAT  + +    G+LLG  +
Sbjct: 221 GIKGVSLFIVPKFLVKEDGSLGERNGVSVGALEEKMGIHGNATCVMNYDEATGYLLGTEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354
                +  M     L   +  +     +   A+ YAR     R V+G    D+P      
Sbjct: 281 KGMRAMFTMMNEARLGVGVQGLGQATAAYQNALEYARDRLQGRAVTGVEAPDKPADPIIV 340

Query: 355 ---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAP 409
              ++RA+ D    I  A A     A   D ++   +E A     ++ P+ K +      
Sbjct: 341 HPDIRRALLDQKSFIEGARAFVLWSAELIDRSQRNGDEEAEGLVSLIIPVLKGFLTDKGL 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG----TN 463
               +A +  GG GYIEE  +++  R+S    I  G+     LD++   L + G      
Sbjct: 401 ESAVQAQQVFGGHGYIEEWGMSQFVRDSRIAMIYEGANGIQALDLVGRKLAQDGGKHVMG 460

Query: 464 LFEQLFSTLEQDLGSSGKKV--ITILRDSISLCKEDKGLARFLTE 506
            FE + S ++++ G+   K   +  L+D+    K+ +G A F  +
Sbjct: 461 FFEMIKSFIKENEGNEALKADFLDPLKDA---SKDLQGAAMFFMQ 502


>gi|84515814|ref|ZP_01003175.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84510256|gb|EAQ06712.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 568

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 37/317 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y ++G K ++
Sbjct: 150 PKLISGEWCGT-------------MNLTEPQAGSDVGALRTKAEPNGDGTYAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA++ G       +  F+VP+L+ D     G  N L    L++K+
Sbjct: 197 SWADNDFTANVCHLVLARLPGANPGTKGISLFMVPKLIPDADGNPGRKNDLRVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +E++   G+L+G  +     +  M     L   +  +     +L  A+ YA
Sbjct: 257 GLHGSPTAVMEYAGATGWLVGPEHGGMAAMFTMMNNARLGVGMQGIGTAERALQHALAYA 316

Query: 340 RRRHV----SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394
           + R        G +I+   ++R +  +  DI AA A++   A + D A +  + A  AR 
Sbjct: 317 QDRKQGRADGTGAIIEHADVRRMLTTMRADIYAARAIALMNAVAIDMATATHDPAWTARA 376

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             + PITK +   +        ++  GG G+IEE   A+  R+   ++I  G+     +D
Sbjct: 377 AFLTPITKAFGTDVGVEATNTGVQIHGGMGFIEETGAAQFVRDVRVSTIYEGTNGIQAMD 436

Query: 454 VL--NLLEKGTNLFEQL 468
           ++   L++ G   F  L
Sbjct: 437 LVARKLMDGGDAAFRLL 453


>gi|261196950|ref|XP_002624878.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239596123|gb|EEQ78704.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 622

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 188/473 (39%), Gaps = 69/473 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  PS + ++L      VLS +       A  N P L      G     D +     W
Sbjct: 35  LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R I +G+           +    A               A   +  ++ ++S  A
Sbjct: 95  RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212
           L+T P    D A K+  R  +  + A   +    +           G  +TE++GG+D+ 
Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARNRLISRDPSFAWTSGQWMTERKGGSDVR 204

Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254
              + G+K+S                 G + L G KWF S+  ++  IMLA+    G++ 
Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264

Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            F  P  R +  G+      NG+  QRLKNK+G ++  T ELE     G+L+G       
Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360
            +  +  +  + +   +V G    LA +  YA+ R   G +L + P   RA+A       
Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384

Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410
              ++   +A+   +S    +   +A   S       + +A  R++ P+ K      +  
Sbjct: 385 GHLNLLHFVASLLGISEGQDSRLTQATQASILPTNAQQSSALLRLLTPMGKAQTALRSIN 444

Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   ME +GG GY+E      +IAR +R+    SI  G+ + M  D++ +++
Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497


>gi|291336326|gb|ADD95886.1| acyl CoA dehydrogenase [uncultured marine bacterium
           MedDCM-OCT-S08-C1068]
          Length = 587

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 150/320 (46%), Gaps = 42/320 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++  + SDG Y +SG K F++S    +++  I L         A  
Sbjct: 164 LTEPVCGTDLGLLKTKAAQQSDGTYKISGQKIFITSGDHDLTENIIHLVLARSTDSPAGT 223

Query: 250 EGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+ +  +DG+    NG+    +++K+G + +AT  L F    G+++G  + 
Sbjct: 224 KG-ISLFLVPKFIVNDDGTVGQRNGISTGSIESKMGIKGSATCVLNFDEATGYMIGSKDK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILID 351
               +  M  ++ L+  ++ + G+ +S      ++ YA+ R                +I+
Sbjct: 283 G---LNAMFTMMNLERIVVGIQGLGISEIAYQNSLAYAKERKQGKTNNTKSTNGADFIIE 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              +++++ ++   I    AL F L+   +      + K + E + Y  +M P+ K    
Sbjct: 340 HADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDDKIKQEASDYVSLMTPVVKSLFT 399

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            +A  +  +AM+  GG GY +++ I + YR++    I  G+ +    D++   L  K  N
Sbjct: 400 DLAMEITNDAMQIHGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLSNKNGN 459

Query: 464 LFEQLFSTLEQDLGSSGKKV 483
           + ++    ++ +  S  +KV
Sbjct: 460 IIQKFLDMVKVETDSKNEKV 479


>gi|239609710|gb|EEQ86697.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 622

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 187/473 (39%), Gaps = 69/473 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103
           L +  PS + ++L      VLS +       A  N P L      G     D +     W
Sbjct: 35  LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R I +G+           +    A               A   +  ++ ++S  A
Sbjct: 95  RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212
           L+T P    D A K+  R  +  + A   +    +           G  +TE++GG+D+ 
Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARKRLISRDPSFAWTSGQWMTERKGGSDVR 204

Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254
              + G+K+S                 G + L G KWF S+  ++  IMLA+    G++ 
Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264

Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            F  P  R +  G+      NG+  QRLKNK+G ++  T ELE     G+L+G       
Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360
            +  +  +  + +   +V G    LA +  YA+ R   G +L + P   RA+A       
Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384

Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410
              ++   +A+   +S    +   +A   S       +  A  R++ P+ K      +  
Sbjct: 385 GHLNLLHFVASLLGISEGQDSRLTQATQASILPTNAQQSGALLRLLTPMGKAQTALRSIN 444

Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   ME +GG GY+E      +IAR +R+    SI  G+ + M  D++ +++
Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497


>gi|254449900|ref|ZP_05063337.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus
           238]
 gi|198264306|gb|EDY88576.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus
           238]
          Length = 566

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 37/317 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ S+ +   DG Y +SG K ++
Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALRSKAEPNDDGSYAISGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKI 279
           S   +D       ++LA++ +G  G      F+VP+L+ D  G+P   N L    L++K+
Sbjct: 197 SWADNDFTENVCHLVLARLPDGVAGTKGISLFMVPKLIPDADGNPGERNDLRVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +E++   G+L+G+ +     +  M     L  A   +     +   A+ YA
Sbjct: 257 GLHGSPTAVMEYAGAKGWLVGEKHAGLAAMFTMMNNARLGVATQGIGVAEAAYQHALAYA 316

Query: 340 --RRRHVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394
             R++  +GG   + +   ++R +A +  DI  A A+S   A + D + +  +    AR 
Sbjct: 317 MDRKQGKAGGTGTIAEHADVRRMLASMKADIFTARAISLANAVAIDMSNATGDAGWKARA 376

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ PI+K +   +   + +  ++  GG G+IEE   A++ R+    +I  G+     +D
Sbjct: 377 ALLTPISKAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMD 436

Query: 454 VL--NLLEKGTNLFEQL 468
           ++   +++ G   F  L
Sbjct: 437 LVARKMMDGGDAAFALL 453


>gi|73541828|ref|YP_296348.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119241|gb|AAZ61504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 600

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  + + + P++ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDELKQRYLPRLIAGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+ ++ +DG Y +SG K F++    D       ++LA+     EG  G   FLV
Sbjct: 171 DLALVRSRAERQADGSYKVSGTKIFITYGEHDMAENIVHLVLARTPDAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVECVSIEHKLGIKASPTAVLQFGDNGGAIGYLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M +++      + V G+ +S     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFVMMNAARFGVGVQGIAISDRAYQQAVAYAKERVQSRPVDGSSKDAVTIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           + ++      A AL+        LA+   +A++R+   A    + P+ K W  +M+  V 
Sbjct: 348 LIEMRALTEGARALALVAAGYSDLAHQSPDAETRAHYGAAYEYLVPVIKGWSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A+HYR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|99081398|ref|YP_613552.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037678|gb|ABF64290.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 593

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 165/398 (41%), Gaps = 66/398 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264
            +   DG Y ++G K F+S+    MS+  I  +LA++ G       V  F+VP+ +  ED
Sbjct: 179 AEPQDDGSYLVTGQKIFISAGDHDMSENVIHLVLAKIPGGPDGIKGVSLFIVPKFIVNED 238

Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+P   NG+   +++ K+G   N+T  + +    G+LLGD++     +  M     L   
Sbjct: 239 GTPGERNGVSVGKIEEKMGIHGNSTCVMNYDGAKGWLLGDMHKGMRAMFTMMNEARLGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAA 369
           +  ++    +   A+ YA+     R V+G          LI  P ++R + D       A
Sbjct: 299 MQGLAQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D+A    ++ A   I  + P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFILWGATMIDKAHRSGDKDADGLISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             ++++ R++    I  G+     LD++                L QD    GK V+   
Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462

Query: 488 RDSISLCKED----KGLARFLTEKIALAS---SAAALY 518
                 CKE+       A+   E +  AS    AA +Y
Sbjct: 463 DMVKGFCKENAEISDAYAKDFIEPLKAASKDLQAAGMY 500


>gi|229590748|ref|YP_002872867.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas
           fluorescens SBW25]
 gi|229362614|emb|CAY49522.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas
           fluorescens SBW25]
          Length = 582

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 41/346 (11%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
             P +   + P+I S +  PT             + LTE + G+D+  +  + +  +DG 
Sbjct: 144 AAPWLQARYLPEIVSGQTLPT-------------MCLTEPQAGSDVGLLRCRAEPQADGS 190

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQR 274
           Y LSG K F+S    D       ++LA+V         +  FLVP+ L+DG PNG+    
Sbjct: 191 YRLSGSKIFISGGEHDLTANILHLVLARVPDAPPGSRGISLFLVPKQLDDGQPNGVRCDG 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  L F    G+L+G  N     +  M     L   +  +  +  +   
Sbjct: 251 IEHKMGIKGSATCSLVFDGAQGWLIGATNRGLAAMFVMMNSARLHVGLQGLGHVEAAWQN 310

Query: 335 AIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           A  YA  R               +   +   P M+R + ++        A+ +  A+  D
Sbjct: 311 ARQYAAERLQMRAPSRPEEVVAQAADPIRYHPAMRRVLLELRTTSEGMRAIGYWAAHLLD 370

Query: 382 EAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +A+    S  A  A ++ PI K +  +      + A++  GG GY+ E +I +  R+S  
Sbjct: 371 QAEHDQDSSAAQLAPLLTPIIKAFFTEQGFRQASHALQVFGGYGYVTEFAIEQTLRDSRI 430

Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             I  GS      D+L   +L      F  L      + G  G+ V
Sbjct: 431 AMIYEGSNEIQANDLLLRKVLGDEGRAFGLLLDAFRAEAGQGGQSV 476


>gi|118389496|ref|XP_001027832.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89309602|gb|EAS07590.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 621

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 171/433 (39%), Gaps = 59/433 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
            K+LE LG+  ++    +LA+      PQL  +   G R DK+    AWH +   S   G
Sbjct: 60  QKDLEKLGDLAVNKML-DLAKQCEREQPQLVQFDAYGRRIDKLNLSNAWHKMHEISAEQG 118

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--K 172
           +  + +D    P   + A  I+  +LY+ +   +G    P   +     ++T    H  K
Sbjct: 119 IVATAYD----PQNGQYARLIQLIKLYIYST-SSGLYGCPLAMTDGASYVLTQVLAHDSK 173

Query: 173 DWAPKIFSREYDPTNKAPMQKTSV--AIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLS 229
               K+  +  D  N       +     G  +TEKRGG+D++  T +         Y L 
Sbjct: 174 VLDKKVIGKIQDALNHLTTYNPAEFWTSGQWMTEKRGGSDVSGSTETVAVNYKPNKYRLY 233

Query: 230 GHKWFLSSPMSDAFIMLAQV--EGR-----------------------VGCFLVPRLLED 264
           G+KWF S+      + LA++  EG                        +  FL+    +D
Sbjct: 234 GYKWFSSATDCQVTLALARIIPEGAKLTLEINWQVITFQNKKEMHKIPLSLFLLKLRKKD 293

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIM 323
              N +   RLK K+G +   T EL    T  +L+  +      +  M  I    +SA+ 
Sbjct: 294 KELNKIEIIRLKEKLGTKQLPTAELLLKGTPAYLISPVGKGIKYISHMLNITRLYNSALR 353

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V G ++S                     P+  + ++D+ +       L  R+     + 
Sbjct: 354 AVFGNKLSKI-------------------PLQVKVLSDMEVTFRGNLILLLRVGYWLSKE 394

Query: 384 KSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +S +    E    RI +PI K +  K    + +E +E  GG GY+E   +   +R+S   
Sbjct: 395 QSNTATQMEGDLLRISSPILKLYSGKDVVRLCSEGLEYFGGLGYMENSHLPNLFRDSQVL 454

Query: 441 SILLGSGNAMVLD 453
           +I  G+ N + LD
Sbjct: 455 AIWEGTTNVLCLD 467


>gi|325291892|ref|YP_004277756.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325059745|gb|ADY63436.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 598

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   T    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+    M+D  +  ++A++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFI 231

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  EDGS    NG+    +++K+G   NAT  + + +  G+LLG  N     +  M
Sbjct: 232 VPKFLVKEDGSLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360
                L   +  +S   ++   A+ YAR     R +SG    D+        P ++R + 
Sbjct: 292 MNEARLGVGLQGLSVGEIAYQNAVEYARERIQGRSLSGAKFPDKKADPIIVHPDIRRTLM 351

Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            I     A       TAL   +A+   + K R        ++ PI K             
Sbjct: 352 TIKAYNEAGRAFLLWTALQSDIAHRSTDEKERQTADDLLGLVTPILKGVLTDKGFDHAVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  ++++ R++    I  G+     LD++                  +
Sbjct: 412 AQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            LG + G+ V+ + ++    C+E++       EK++L +      + G+ND+
Sbjct: 455 KLGMNGGRAVMALFKEIGDFCEENR-----PDEKLSLYTKG---LKKGLNDL 498


>gi|325283937|ref|YP_004256478.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315746|gb|ADY26861.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 611

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 161/379 (42%), Gaps = 52/379 (13%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAP 190
           H +  A L +M        M P +T  ++ AL  + +P + + + PK+ S E+  T    
Sbjct: 111 HTVANAMLEMMNSANVAWAMYPGLTHGAVSALSEVGSPELQQLYLPKLISGEWTGT---- 166

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIM 245
                    + LTE   GTD+  I ++     DG Y ++G K F+S+   D       ++
Sbjct: 167 ---------MCLTEPHAGTDLGIIRTKAADNGDGTYSITGTKIFISAGEHDFTDNIIHLV 217

Query: 246 LAQVEGR------VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNT 294
           LA++EG       +  FLVP+ +   DG+P   NG+    L++K+G   NAT  L F   
Sbjct: 218 LARLEGSPEGTKGISLFLVPKFVPNADGTPGERNGVVCGSLEHKMGIHGNATAVLNFDGA 277

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGG 347
            G+L+G++N     +  M     L + +  +    V+   A+ YA+ R        V+  
Sbjct: 278 KGWLVGEVNRGMNHMFIMMNAARLGTGLQGLGLGEVAYQNAVAYAKDRTQMRAEPRVNPA 337

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRL-----------ANSFDEAKSRSEEAAYARIM 396
              D  ++   +  + +   A T     L           A+  DEAK + E A    ++
Sbjct: 338 EQADPIIVHPDVRRMLMTGKAYTEAGRALALWLALALDTEAHHPDEAKQK-EAADTVALL 396

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K +       +  ++ +  GG GYI E  + +  R++    I  G+     LD+L 
Sbjct: 397 TPIAKAFMTDNGFNIAVQSQQVFGGHGYIAEWGMEQFVRDARIGQIYEGTNGIQSLDLLG 456

Query: 457 --LLEKGTNLFEQLFSTLE 473
             +L  G    + L  TL+
Sbjct: 457 RKVLMDGGKKLQALAGTLQ 475


>gi|154250918|ref|YP_001411742.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154868|gb|ABS62085.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 597

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 51/360 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ + E+  T             + LTE   GT
Sbjct: 125 MYPGLSHGAYSALSQHGTDEQKKKYLPKLVTGEWTGT-------------MNLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  + ++   + DG + +SG K F+S+   D       ++LA++EG       +  FLV
Sbjct: 172 DLGLLRTKAVPVGDGSFKISGQKIFISAGEHDLADNILHLVLARIEGAPAGVKGISLFLV 231

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  EDGS    NG+    L+ K+G   NAT  L +    G+L+G+ +     +  M 
Sbjct: 232 PKFLVNEDGSLGNRNGVSCGSLEEKMGIHGNATCVLNYDEAIGWLVGEEHKGLRAMFTMM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILIDQPVMKRAIAD 361
               L   +  +S    +   A+ YA    + R ++G          LI  P ++R + D
Sbjct: 292 NEARLGVGLQGLSQSEAAYQNAVTYALERLQGRSLTGPKAADKAADPLIVHPDIRRMLLD 351

Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I      A  +   TAL   L++  D+ K+R        ++ P+ K +          +A
Sbjct: 352 IKSFNEGARALLVWTALHGDLSHRSDDEKTREFGEDMMSLLTPVLKGYFTDRGFMNAVDA 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            +  GG GYIEE  + +  R++    I  G+     LD++   L + G       F T++
Sbjct: 412 QQVYGGHGYIEEWGMEQFVRDARIAMIYEGANGVQALDLVGRKLAQNGGRAVFAFFKTID 471


>gi|27376269|ref|NP_767798.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349409|dbj|BAC46423.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 596

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 170/393 (43%), Gaps = 68/393 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M   +T  +  AL+   +P   K + PK+ + E+  T             + LTE   GT
Sbjct: 126 MYGGLTMGATAALIVHGSPEQKKTYVPKMVAGEWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++  + +DG + ++G K F+S+    ++D  I  +LA++EG       V  F+V
Sbjct: 173 DLGMLRTKAVRQADGSFKITGTKIFISAGEHDLADNIIHLVLARIEGAPAGIKGVSLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ NG+    +++K+G   N+T  + + +  G+L+G+ N     +  M 
Sbjct: 233 PKFLVNADGSVGARNGVVCGSIEHKMGIHGNSTCVMNYDSATGWLIGEENKGMQGMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355
               L  A+  ++   V+   A+ YAR R     ++G    D+P              + 
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVAYARERIQGRSLTGTKAPDKPADPIIVHPDVRRTLLS 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A      TAL   +A+  ++AK R     +  +M P+ K +      A   +A
Sbjct: 353 IRAFNEAARAFVMWTALKSDVAHRSEDAKDRQAADDHMGLMTPVLKGFLTDYGFANAVQA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GYI E+ + +  R++    I  G+     LD++                L +D
Sbjct: 413 QQMYGGHGYIAEQGMEQFVRDARIAMIYEGANGIQALDLVG-------------RKLPRD 459

Query: 476 LGSSGKKVITILRDSISLCKE---DKGLARFLT 505
               G+ ++    + ++  KE   D+ L  F+T
Sbjct: 460 ---GGRAIMAFFGEVMAFAKENGGDEALKPFIT 489


>gi|254463326|ref|ZP_05076742.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206679915|gb|EDZ44402.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 593

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 159/376 (42%), Gaps = 59/376 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   GTD+  + ++     DG Y +SG K F+SS    M+D  I  +LA++EG   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAAPQDDGSYKISGQKIFISSGEHDMADNIIHLVLAKIEGGPE 220

Query: 252 ---RVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+  + EDGS    NG+    ++ K+G   N+T  + +    G+LLGD +
Sbjct: 221 GIKGVSLFIVPKFNINEDGSLGARNGVAVGSIEEKMGIHGNSTCVMNYDEATGYLLGDEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---------HVSGG---ILID 351
                +  M     L   +  ++    +   A+ YA+ R            GG    LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLAQADAAYQNAVDYAKDRLQGRAVTGTENPGGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409
            P ++R++ D       A A     A   D+A    ++ A     ++ P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFTEGARAFLLWGATMIDDAHRSGDKDADGLVSLLTPVIKGFLTDQGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +  +A +  GG GYIEE  ++++ R++    I  G+     LD++              
Sbjct: 401 DMTVKAQQIYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGL-----ARFLTEKIALASSAAALYRAGMND 524
             L QD    GK V+       + CKE+ G      A F+     L +S+  L  AGM  
Sbjct: 448 RKLAQD---GGKHVMAFFDLVKTFCKENAGQDDAYDAEFIE---PLKASSKDLQAAGM-- 499

Query: 525 IADVFLENRFLDNCHS 540
               F++N   +  H+
Sbjct: 500 ---YFMQNGMKNPNHA 512


>gi|254509704|ref|ZP_05121771.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221533415|gb|EEE36403.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 593

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   GTD+  + ++ +   DG Y +SG K F+S+    M+D  I  +LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQKIFISAGDHDMADNIIHLVLAKIPGGPE 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    NG+   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFIVNEDGSLGERNGVSVGKIEEKMGIHGNSTCVMNYDEATGWLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351
                +  M     L   +  +S    +   A+ YA+     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLSQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R + D       A A     A   D+A    ++ A   I  + P+ K +      
Sbjct: 341 HPDIRRNLMDQKSFTEGARAFILWGATMIDKAHRSDDKDADGLISLLTPVIKGFLTDEGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +  +A +  GG GYIEE  ++++ R++    I  G+     LD++              
Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499
             L QD    GK V+       S CKE+ G
Sbjct: 448 RKLAQD---GGKHVMAFFEMVKSFCKENGG 474


>gi|109898458|ref|YP_661713.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700739|gb|ABG40659.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 616

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 53/340 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++       +   + P++ + E+  T             + LTE   G+ +A I
Sbjct: 145 TVAAANVIKNFAEQSIKDKFMPRMLTGEFTGT-------------MALTEPHAGSSLADI 191

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261
           T+  +   DG Y + G K F+S+    +SD  +  +LA+++G       +  F+VP  RL
Sbjct: 192 TTNAKPADDGTYRIKGSKMFISAGDHELSDNIVHLVLAKIQGAPAGVKGISLFVVPKFRL 251

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311
            E+G P   N +    L +K+G R   +  L F    +  G+L+G+    L      + +
Sbjct: 252 DENGEPAQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCHGYLVGEAHQGLKYMFLMMNE 311

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364
            +I +   +A++  SG R SL  A    + R        D+P        +KR +     
Sbjct: 312 ARIGVGFGAAMLGYSGYRYSLGYAKERTQGRVAPNNKPTDKPATIIKHGDVKRMLLAQKS 371

Query: 365 DIAAATALSFRLANSFDE--------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +  A +L F  +   DE        AK R+ E     ++ P+ K W  +  P     A+
Sbjct: 372 YVEGAMSLCFYASRLVDELHIAETPEAKQRTAE--LLDLLTPVVKAWPSEFGPKANDLAI 429

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + +GGSGY  E  + + +R++  N I  G+     LD++ 
Sbjct: 430 QILGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLMT 469


>gi|254436626|ref|ZP_05050120.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252072|gb|EDY76386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 566

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 37/317 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ S      DG Y +SG K ++
Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALRSTAVPNDDGSYAISGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA++ +G  G      F+VP+ + D     G  N L    L++K+
Sbjct: 197 SWADNDFTENVCHLVLARLPDGVAGTKGISLFMVPKRIPDADGNLGERNDLRVISLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +E++   G+L+G+ +     +  M     L  A   +     +   A+ YA
Sbjct: 257 GLHGSPTAVMEYAGAKGWLVGEKHAGMAAMFTMMNNARLGVATQGIGVAEAAYQHALAYA 316

Query: 340 --RRRHVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394
             R++  +GG   + +   ++R +A +  DI AA A+S   A + D A +  + A  AR 
Sbjct: 317 MDRKQGKAGGTGTIAEHADVRRMLASMKADIFAARAISLANAVAIDMANATGDGAWTARA 376

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ PI+K +   +   + +  ++  GG G+IEE   A++ R+    +I  G+     +D
Sbjct: 377 ALLTPISKAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMD 436

Query: 454 VL--NLLEKGTNLFEQL 468
           ++   +++ G   F  L
Sbjct: 437 LVARKMMDGGDAAFALL 453


>gi|149184496|ref|ZP_01862814.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21]
 gi|148831816|gb|EDL50249.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21]
          Length = 601

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 52/370 (14%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL+      +   + PK+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTNGAISALLAKGSDEQKAMYLPKMVSGEWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  I ++ + + DG Y ++G K F+S+    MS+  I  +LA+  G       +  F+V
Sbjct: 173 DLGMIRTKAEPLGDGSYAITGTKIFISAGEHDMSENIIHLVLAKTPGAPDSTKGISLFVV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  EDG+P   NG+    ++ K+G   N+T  L +    G+++G+ N     +  M 
Sbjct: 233 PKFLVNEDGTPGERNGVMCGSIEEKMGIHGNSTCVLNYDGAKGWMVGEENKGLAAMFIMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGI--------LIDQPVMKRAIAD 361
               L   +  +S   V+   A+ YA  RR  R ++G          +   P ++R + D
Sbjct: 293 NAARLGVGMQGLSQAEVAYQNAVAYALDRRQGRALTGPAEPEAQADPIFVHPDVRRMLMD 352

Query: 362 IALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                 A  AL+        L +     + R+E      +M P+ K +       V    
Sbjct: 353 AKAFTEAMRALALWGGLLVDLTHKAQTEEERAEADLLLGLMTPVIKGYGTDKGYEVATNM 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            +  GG GYIEE  +++  R++    I  G+     +D+    L +KG    +  F  + 
Sbjct: 413 QQVFGGHGYIEEWGMSQFVRDARIAQIYEGTNGVQAMDLCGRKLAQKGGAAVQAFFKHVG 472

Query: 474 QDLGSSGKKV 483
            ++ ++GK++
Sbjct: 473 DEI-AAGKEI 481


>gi|119479329|ref|XP_001259693.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119407847|gb|EAW17796.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 639

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 206/521 (39%), Gaps = 87/521 (16%)

Query: 35  NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y++D+ L  L++ + PS  ++ ++     LGE  +S   +E +  A  + P +  Y  
Sbjct: 25  NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQPYVKGYNV 84

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L R     G+    +D S+    R             + Q  
Sbjct: 85  WGQRYDYDRLITSEGWKQLSRWGARHGVVALGYDPSYGASRR-------------LVQYT 131

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI--------- 198
             +L  PS        L + P    D A  I S++    +        V           
Sbjct: 132 VNYLYGPSS------GLTSCPVAMTDGAALILSQQLQQHSFPEDHPFRVVFNHLTSRNED 185

Query: 199 ----GLGLTEKRGGTDI---------------AAITSQGQ---KISDGIYCLSGHKWFLS 236
               G  +TE+ GG+D+               ++ TS       + +G Y +SG K+F S
Sbjct: 186 FWTSGQWMTERAGGSDVQNTETWATHDPLPASSSTTSNNNPLGTLGEGEYSISGFKFFSS 245

Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN--------GLCYQRLKNKIGNRSNAT 286
           +  ++  ++LA+    G++  FL P       PN        G+   RLK K+G +   T
Sbjct: 246 ATDANVTLLLAKTAPSGKLSTFLAPLRRTITPPNQAPREVTNGVRIHRLKTKLGTKELPT 305

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            ELE  +    L+G  +     +  +  +    + I S+   R +L+ A  ++R R   G
Sbjct: 306 AELELRDMRAHLVGQRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARSFSRARSTVG 365

Query: 347 GILIDQPVMKRAIADIALDIAAATALSF-------------RLANSFDEAKSRSEEAAYA 393
             L   P+  R +A++ +   AA  L F               A         +E     
Sbjct: 366 EPLWLIPMHLRLLAEVEVRQRAAMQLGFFTVGVMGVVENPGATAEVPGHVPKGAEATVVF 425

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGN 448
           R +  ++K    KMA   I E  E +GG GY++E      +++R  R +  NSI  G+ N
Sbjct: 426 RALTAVSKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTN 485

Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILR 488
            +  +++  L    N F    + +E+ LG   G+K+   LR
Sbjct: 486 VLASEMVRFLLARDN-FAVFAAWVERVLGMIRGEKLAQALR 525


>gi|254720095|ref|ZP_05181906.1| hypothetical protein Bru83_11263 [Brucella sp. 83/13]
 gi|265985101|ref|ZP_06097836.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839066|ref|ZP_07471886.1| acyl-COA dehydrogenase [Brucella sp. NF 2653]
 gi|264663693|gb|EEZ33954.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306405889|gb|EFM62148.1| acyl-COA dehydrogenase [Brucella sp. NF 2653]
          Length = 597

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T    + + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKETYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|56478462|ref|YP_160051.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314505|emb|CAI09150.1| probable acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 599

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 66/358 (18%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V  A  + +  +  + + W PK+ S E+  T             + LTE + G+D+AA 
Sbjct: 131 NVGQAEALLIAASDELKQTWLPKVVSGEWGST-------------MNLTEPQAGSDLAAT 177

Query: 215 TSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL 262
            ++ +   DG + L G K F+S     ++   + L         A V+G +  FLVP+ L
Sbjct: 178 RTRAEPAPDGSFRLFGQKIFISYGEHELTSNIVHLVLARLPDAPAGVKG-LSLFLVPKFL 236

Query: 263 --EDGSPNGLCYQR---LKNKIGNRSNATVELEFSNT------FGFLLGDLNVSTGPVED 311
              DG+P      R   +++K+G   + T  + + +        G+L+G      GP   
Sbjct: 237 LDADGNPGAKNDVRCIAIEHKLGIHGSPTCTMSYGDAGDAGGAVGWLVG------GPNRG 290

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR--------HVSGGILIDQPVMKR 357
           ++ + I ++ A   V      L E     A+ YAR R          +G  ++  P +KR
Sbjct: 291 LETMFIMMNEARFGVGVQGAGLGERAYQLALGYARERVQGRDAITGEAGQPILHHPDVKR 350

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAV 411
            +  +   + A  AL +  A  FD A+   + A       Y  ++ P+ K WC ++   V
Sbjct: 351 MLLSMRARVMAMRALLYTAAGWFDFAEHHPDAALAAKCRRYVDLLMPVAKGWCTEVGQQV 410

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE 466
            ++A++  GG G++EE  IA+  R++   +I  G+      D++    L E G  L E
Sbjct: 411 CSDAIQVFGGMGFVEETGIAQFARDARIITIYEGTTGIQANDLIGRKILRESGETLRE 468


>gi|126728299|ref|ZP_01744115.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
 gi|126711264|gb|EBA10314.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
          Length = 546

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 35/295 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGR------ 252
           + LTE + G+D+ A++++     DG Y ++G K ++S   +D    +   V GR      
Sbjct: 145 MNLTEPQAGSDVGALSTKAVPNGDGTYAITGQKIYISWGDNDFTGNVCHLVLGRLPDAGP 204

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ + D     G+ N L    L++K+G   + T  + +    G+L+G  N
Sbjct: 205 GTKGISLFLVPKFVPDENGEPGARNDLRVVSLEHKMGLHGSPTCVMSYEGATGWLVGAEN 264

Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG---GILIDQPV 354
                 + M+ +   +++A + V    + +AE     A+ YA  R       G ++    
Sbjct: 265 ------DGMRAMFTMMNNARLGVGVQGIGVAEGAYQHALAYAEERKQGKSETGNILGHAD 318

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVI 412
           ++R +A++  D+ AA ++   LA + D A++  ++  AA A ++ PI K +       V 
Sbjct: 319 VRRMLAEMKADVFAARSIGLMLAVALDMARATGDKSWAARAGVLTPIAKAFGTDTGIEVA 378

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
           ++ ++  GG GYIEE   A++ R+    SI  G+     +D++   L++ G  +F
Sbjct: 379 SKGVQVHGGMGYIEETGAAQYLRDVRVTSIYEGTNGIQAMDLVGRKLMDGGEAVF 433


>gi|71003177|ref|XP_756269.1| hypothetical protein UM00122.1 [Ustilago maydis 521]
 gi|46096274|gb|EAK81507.1| hypothetical protein UM00122.1 [Ustilago maydis 521]
          Length = 649

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 48/451 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  Y   G+R DK+     W  L   +  D +    + R        +A   + ARL+
Sbjct: 76  PTLVQYDAWGQRVDKLVTGEGWKRLKGVAAQDAIVAESYSRPEATSGGGRARLGQHARLF 135

Query: 142 ------LMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                 + A +    L   S+T  ++  + L  T +  ++  P++ S   DP        
Sbjct: 136 AFTRSVMFAPVSKVVLCPVSMTDGAVRVLELFGTEKQKRENIPRLCS--TDPI------- 186

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKI-------SDGIYCLSGHKWFLSSPMSDAFIML 246
           T+   G  +TE+ GG+D++   +  + +       +   + +SG KWF S+   D  + L
Sbjct: 187 TAWTAGQWMTERPGGSDVSRTETVARPVNAHKKPEAGDQFVISGFKWFSSATDGDIALAL 246

Query: 247 A------QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           A      Q+  R     + ++ +D  G  NG+   RLK K+G +   T ELE     G L
Sbjct: 247 ARTNDDLQLGSRGLSLFLIKIRDDKTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGEL 306

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQPVMKR 357
           +G++      +  +  +  L SA  +V  +   L  A  YA+ R  + GG L   P+   
Sbjct: 307 VGEIGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLEKLPLHTD 366

Query: 358 AIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  + +       + F    L  + +  ++   +    R++ P  K +    A      
Sbjct: 367 QLLKVTVTYRVFLQIFFSNVLLMGASESGQASKRDQTRLRLLTPALKAFIATRASESYLT 426

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGT---------- 462
            +E  GG GY+EE  +A   R+     I  G+   + LDVL +L   KG           
Sbjct: 427 LIESFGGQGYMEEVGMAEMLRDCTVERIWEGTPAILSLDVLRVLVQSKGQALVEFFQDIG 486

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           N+   L S L QDL +    +  ++R + S+
Sbjct: 487 NILASLPSKLSQDLSAEISFLGNVVRRTASI 517


>gi|300310835|ref|YP_003774927.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073620|gb|ADJ63019.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 594

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 67/387 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ ALMT  T +  + +     S ++  T             + LTE + G+
Sbjct: 124 LCPLLTDGTIEALMTAGTQQQKETFIANFISGKWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++     DG Y L G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAVPEGDGTYKLFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------LIDQPVMKRAI 359
            M I++      + + G+ VS     +A+ YAR R  S  +        +I QP ++R +
Sbjct: 288 YMFIMMNAARFAVGIQGLSVSERAYQKAVAYARDRIQSRDLAGSPGPVAIIHQPDVRRML 347

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIA 413
             +   I AA ALS+  A + D A    +EA      A+   + PI K W  +M+  V +
Sbjct: 348 MSMRAQIEAARALSYVAAATSDAAHFSDDEATRKSNQAFYEYLVPIVKGWITEMSIDVTS 407

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
             ++  GG G+IEE   A++YR++    I  G+     +   +L+ + T           
Sbjct: 408 TGVQVHGGMGFIEETGAAQYYRDARILPIYEGT---TAIQANDLVGRKT----------A 454

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGL 500
           +D G+  K ++  +R ++S  + D  L
Sbjct: 455 RDGGAVAKGILAQVRKTVSELQGDAQL 481


>gi|46137383|ref|XP_390383.1| hypothetical protein FG10207.1 [Gibberella zeae PH-1]
          Length = 638

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 204/505 (40%), Gaps = 91/505 (18%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG--GERWDKVEFHPAWHALLRRSI 111
           V  E+  LG+ VLS         A  N P L   G    G+    +     W  L    +
Sbjct: 43  VEAEVTALGDDVLSDEVFSWITDAERNKPYLKGSGRDVFGQWKGDLVTGEGWRGLQNFGL 102

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYL---------------MAQLEAGHLMSPSV 156
             G   + +D  + P  R  A++    +L+                 A+L   HLMSP +
Sbjct: 103 SRGFVAAGYDTEYGPFAR--AYQFLRIQLWTPSCANVGCPSAMQDGAARLLQTHLMSPEL 160

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA--AI 214
              S     T  RV ++    + SR+      A    TS   G  +TE+ GG+D++    
Sbjct: 161 ---SKRLTDTQRRVFENAFQHLTSRD------ASYAWTS---GQWMTERTGGSDVSLTET 208

Query: 215 TSQGQKISD------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-- 259
           T+  Q ISD            G + +SG KWF S+  S   ++LA+  +G +  F+ P  
Sbjct: 209 TAIHQPISDLGLASKIEDIPLGPWSISGFKWFSSATDSRMTVLLARTSKGGLSTFIAPMY 268

Query: 260 -----------RLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                      +  E+G   NG+  QRLKNK G +S  T EL   +   +L+G       
Sbjct: 269 KHDPHALTATGQSKENGENLNGVRIQRLKNKSGTQSLPTAELVLEDMRAWLVGQEGHGIQ 328

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADI 362
            + ++  L  + S++ +V  +   LA A  YAR R V  G      L +  +  R ++ I
Sbjct: 329 EIANVLTLTRVHSSVSAVGYLGRGLAIARAYARVREVGAGRGARMKLTESSLHMRTLSKI 388

Query: 363 ALDIAAATALSFRLANSFDEAK------------------SRSEEAAYARIMAPITKYWC 404
           + +      LS   ++    ++                  S+   A   R++  +TK + 
Sbjct: 389 SCEYRGLMLLSMFTSHVLGVSEHGVSSTSSLSPALETLTPSKQHAAPLVRVVTQLTKAYI 448

Query: 405 CKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           CK +  ++   ME +GG GY+  EE+   +IAR +R+     I  G+ + +  D L  L+
Sbjct: 449 CKASVQLLFSCMESLGGVGYLANEEQEYLNIARLHRDCAVLPIWEGTTDVLSTDFLRALK 508

Query: 460 K---GTNLFEQLFSTLEQDLGSSGK 481
               G    + L   + + + S GK
Sbjct: 509 HTKGGREALDALEDFVRRGITSQGK 533


>gi|126726056|ref|ZP_01741898.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126705260|gb|EBA04351.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 571

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 152/315 (48%), Gaps = 55/315 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + G+D+ A+ S+     DG Y +SG K 
Sbjct: 148 YLPKLTSGEWTGT-------------MNLTEPQAGSDVGALKSKAVDNGDGTYAISGQKI 194

Query: 234 FLSSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKN 277
           +++    DA      ++LA++ EG  G      FLVP+ + D  G+P   N L    L++
Sbjct: 195 YITWGDHDAAENICHLVLARLPEGGDGTKGISLFLVPKFIPDEAGNPGVANSLKVVSLEH 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-- 335
           K+G   + T  +++    G+L+G    + G ++ M     +++A + V+   V +AEA  
Sbjct: 255 KMGIHGSPTAVMQYDGATGWLVGQ---AQGGMKAM--FTMMNNARLGVAAQGVGMAEAAF 309

Query: 336 ---IHYARRRH-----VSG-GILIDQPVMKRAIADIALD------IAAATALSFRLANSF 380
              + +++ R      V G G + D   ++R +  +  D      I A+ A++  LA + 
Sbjct: 310 QHALAFSQDRKQGRTPVEGKGAIFDHADVRRMLMTMRADTFAARAICASNAVAIDLARAT 369

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A  ++  A    ++ PI+K +C  +A  V ++ ++  GG G+IEE   A++ R++   
Sbjct: 370 DSADWQTRAA----LLTPISKAFCTDIANEVASDGLQVFGGMGFIEETGAAQYARDARIL 425

Query: 441 SILLGSGNAMVLDVL 455
            I  G+     +D++
Sbjct: 426 PIYEGTNGIQAMDLV 440


>gi|83854874|ref|ZP_00948404.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842717|gb|EAP81884.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
          Length = 571

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 51/364 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y +SG K ++
Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQKVYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +   +D       ++LA++ G       +  FLVP+ L  EDGS    N L    L++K+
Sbjct: 197 TWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNEDGSLGNANTLNVVSLEHKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-- 337
           G   + T  +++    G+L+G      G +  M     +++A + V G  + +AEA +  
Sbjct: 257 GIHGSPTCVMQYDKATGWLVGP---EQGGMAAM--FTMMNNARLGVGGQGIGIAEAAYQH 311

Query: 338 ---YARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385
              YA  R           G ++D   ++R +  +  +  AA A++   A + D   A  
Sbjct: 312 ALAYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATG 371

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++E  A A  + PI K +      AV    ++  GG G+IEE   A++ R+    +I  G
Sbjct: 372 QAEWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEG 431

Query: 446 SGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503
           +     +D V   +  G     +L   +E D   + + V   + D++    E  +    +
Sbjct: 432 TNGIQAMDLVARKMMDGGEAANRLLDEIEAD-AEAARDVFPNMTDALWQASETLREATDW 490

Query: 504 LTEK 507
           LTE+
Sbjct: 491 LTEQ 494


>gi|89056385|ref|YP_511836.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865934|gb|ABD56811.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 584

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 26/295 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAF--IMLAQVEGR-- 252
           + LTE + G+D+ A+T++ +   DG Y +SG K ++S     M+D    ++LA++ G   
Sbjct: 187 MNLTEPQAGSDVGALTTKAEPQGDGTYAISGQKIYISWGDHDMADNICHLVLARLPGAPK 246

Query: 253 ----VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ +   DG+P   N L    +++KIG   + T  +++    G+L+G+ N
Sbjct: 247 GTKGISLFLVPKKIPDADGNPGVANSLQVVSIEHKIGLHGSPTCVMQYDGARGWLIGEEN 306

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMK 356
                +  M     L  A+  +S    +  +A+ +A  R           G ++D   ++
Sbjct: 307 KGMAAMFTMMNNARLGVAVQGLSVAERAYQQALAFATDRKQGRSLIENGTGTILDHADVR 366

Query: 357 RAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           R + ++  +I +  A++  LA S D E    ++ A+ A  + PI K +       +    
Sbjct: 367 RMLMEMKAEIFSVRAMALDLAVSLDLEKTGDAQAASRAAFLTPIAKVYGTDTGVKLANMG 426

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
           ++  GG G IEE   A+  R+    +I  G+     +D++   L++ G   F  L
Sbjct: 427 IQIHGGMGVIEETGAAQFVRDVRVTTIYEGTTGIQAMDLVGRKLMDGGAAAFALL 481


>gi|289423230|ref|ZP_06425041.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156330|gb|EFD04984.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 377

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 16/263 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM         GLTE   G+D A+I +  +K  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMVTGEKMFAFGLTEPGAGSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +   G   +   + D    G+ + + +NK+G     T ++   N   +   +LG     
Sbjct: 170 TDASAGAKGISTFIVDTKLEGVSFGKAENKMGMIGCPTSDVVLDNVRVSKDDMLG--KEG 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  MK L    L  A  ++     ++ EAI YA+ RH  G  L      +  IA++ 
Sbjct: 228 KGFINAMKTLSVGRLGIACQALGLAEGAMEEAIKYAKARHQFGKSLAKFQNTQFMIAEME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             IAA   L +  A   D  K   +EA+ A++ A     W       VI +A++  GG G
Sbjct: 288 TKIAAMRHLVYDAAYKMDLGKKADKEASMAKLFATEEAKW-------VIDKALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI+E  I R YR+    SI  G+
Sbjct: 341 YIKEYPIERMYRDIRVTSIYEGT 363


>gi|224368000|ref|YP_002602163.1| Acd2 [Desulfobacterium autotrophicum HRM2]
 gi|223690716|gb|ACN13999.1| Acd2 [Desulfobacterium autotrophicum HRM2]
          Length = 603

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 51/298 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+  +K  DG Y ++G+K F+S     +++  I  +LA++EG     
Sbjct: 164 LTEPEAGSDVGALTTTAKKNDDGTYSIAGNKIFISGGDHDLTENIIHPVLARIEGAPAGT 223

Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDL 302
             +  FLVP  ++ +DG+P   N +    L+ K+G   NAT  L F    N  G L+G+ 
Sbjct: 224 KGISLFLVPKFKINDDGTPGESNDVVCTGLEEKMGIHGNATAALAFGSKGNCIGELIGEE 283

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYARRRHVSGGIL------- 349
           N          + I ++ A + V GM+       S   +++YA+ R V G  L       
Sbjct: 284 NKGM-----RAMFIMMNEARLGV-GMQGFGFATTSYINSVNYAKER-VQGVNLMNMFDAD 336

Query: 350 ------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                 I+ P +KR +  +  ++     L +     FD+AK+      + +      ++ 
Sbjct: 337 PKPVAIINHPDVKRQLLSMKANVDGMRTLLYYTGFLFDKAKTAATPEEKEKWEGLIELLT 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           P+ K +C   +  V A+ ++  GG G+I+E    +  R+    SI  G+     +D+L
Sbjct: 397 PVVKSYCTDRSFEVCAQGIQIYGGYGFIKEYPQEQLLRDCKITSIYEGTNGIQAMDLL 454


>gi|254703131|ref|ZP_05164959.1| hypothetical protein Bsuib36_04187 [Brucella suis bv. 3 str. 686]
 gi|261753750|ref|ZP_05997459.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261743503|gb|EEY31429.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 597

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPDTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|146308122|ref|YP_001188587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576323|gb|ABP85855.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 592

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 46/337 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL +  TP     + P++ S E+  T             + LTE + GT
Sbjct: 128 MYPGLTHGAINALTSHGTPEQQAQYLPQLISGEWTGT-------------MCLTEPQCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQ-------VEGRVGCFL 257
           D+  I ++    +DG + L+G K +++    D       ++LA+       V+G +  FL
Sbjct: 175 DLGLIRTRAVPQADGSFALTGTKIWITGGEHDLVDNIIHLVLAKLPDAPDSVKG-ISLFL 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----K 313
           VP+ L DG+ N      L++K+G + +AT  + F    G+L+G+ N     +  M    +
Sbjct: 234 VPKFLADGTRNSAFCGGLEHKMGIKGSATCVMNFEGAKGWLIGEPNKGLSCMFTMMNSAR 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKRAIADIALD 365
           +++ +    ++ S  +++L  A    + R ++G    D+P         ++R +    + 
Sbjct: 294 LMVGMQGLGVAESAYQIALGFARERLQSRSIAGPKAADKPADPILVHPDVRRMLLRQKVM 353

Query: 366 IAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           I    AL++       +A+  ++A++R+      +++ P+ K +          E ++ +
Sbjct: 354 IEGCRALAYFAGLQQDIAHGAEDAEARTRADDLVQLLTPVVKAFLTDEGFTCANEGLQVL 413

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GGSG+ E+  I +  R+S    I  G+     LD++ 
Sbjct: 414 GGSGFTEDWGIEQLVRDSRITRIYEGTNGIQALDLVG 450


>gi|306846013|ref|ZP_07478580.1| acyl-COA dehydrogenase [Brucella sp. BO1]
 gi|306273648|gb|EFM55493.1| acyl-COA dehydrogenase [Brucella sp. BO1]
          Length = 597

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|225629267|ref|ZP_03787300.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|225615763|gb|EEH12812.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
          Length = 617

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 146 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 192

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 193 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 252

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 253 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 312

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 313 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 372

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 373 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 432

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 433 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 472


>gi|306841672|ref|ZP_07474359.1| acyl-COA dehydrogenase [Brucella sp. BO2]
 gi|306288202|gb|EFM59586.1| acyl-COA dehydrogenase [Brucella sp. BO2]
          Length = 597

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|294853431|ref|ZP_06794103.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819086|gb|EFG36086.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 597

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|23500529|ref|NP_699969.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|148557925|ref|YP_001257741.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|161620854|ref|YP_001594740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|163844921|ref|YP_001622576.1| hypothetical protein BSUIS_B0787 [Brucella suis ATCC 23445]
 gi|254700009|ref|ZP_05161837.1| hypothetical protein Bsuib55_03987 [Brucella suis bv. 5 str. 513]
 gi|254705725|ref|ZP_05167553.1| hypothetical protein BpinM_01630 [Brucella pinnipedialis
           M163/99/10]
 gi|254710958|ref|ZP_05172769.1| hypothetical protein BpinB_11992 [Brucella pinnipedialis B2/94]
 gi|254712570|ref|ZP_05174381.1| hypothetical protein BcetM6_04182 [Brucella ceti M644/93/1]
 gi|254715642|ref|ZP_05177453.1| hypothetical protein BcetM_04202 [Brucella ceti M13/05/1]
 gi|256015560|ref|YP_003105569.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029340|ref|ZP_05442954.1| hypothetical protein BpinM2_01550 [Brucella pinnipedialis
           M292/94/1]
 gi|256059026|ref|ZP_05449236.1| hypothetical protein Bneo5_01540 [Brucella neotomae 5K33]
 gi|256157532|ref|ZP_05455450.1| hypothetical protein BcetM4_01585 [Brucella ceti M490/95/1]
 gi|256253493|ref|ZP_05459029.1| hypothetical protein BcetB_04172 [Brucella ceti B1/94]
 gi|260167572|ref|ZP_05754383.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|260567940|ref|ZP_05838409.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261217391|ref|ZP_05931672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261220620|ref|ZP_05934901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261313146|ref|ZP_05952343.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318538|ref|ZP_05957735.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320264|ref|ZP_05959461.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261322972|ref|ZP_05962169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261750492|ref|ZP_05994201.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261756992|ref|ZP_06000701.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986339|ref|ZP_06098896.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265996033|ref|ZP_06108590.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|23464162|gb|AAN33974.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|148369210|gb|ABQ62082.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|161337665|gb|ABX63969.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|163675644|gb|ABY39754.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255998220|gb|ACU49907.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260154605|gb|EEW89686.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260919204|gb|EEX85857.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260922480|gb|EEX89048.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292954|gb|EEX96450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297761|gb|EEY01258.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261298952|gb|EEY02449.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261302172|gb|EEY05669.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736976|gb|EEY24972.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740245|gb|EEY28171.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|262550330|gb|EEZ06491.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264658536|gb|EEZ28797.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 597

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|317131264|ref|YP_004090578.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
 gi|315469243|gb|ADU25847.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
          Length = 378

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 29/284 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG- 230
           + W       +Y P   +  +  S A    L+E   G+D+  I +      DG Y L+G 
Sbjct: 97  EKWGNDALKNKYLPLLASGEKLASFA----LSEPDAGSDLKQIKTAAV-YEDGSYILNGL 151

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            KW     +SD F++ AQV  +    LV R     +P G   + +K  +G R +   EL 
Sbjct: 152 KKWITFGQISDLFLVFAQVGDKPTALLVDR----NTP-GFSIKPIKGLLGARGSMLAELT 206

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR 342
           F         L+G   +    V        LD    SV+   V LA     E+I Y+++R
Sbjct: 207 FEQCRVPADNLVGKEGLGLSHVAQY----CLDYGRFSVASGCVGLAQACLDESIGYSKKR 262

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             SG +L   P++++ IA++A++I AA  L  + A   D    +S  A +        KY
Sbjct: 263 ICSGKLLRKHPLIQKKIAEMAVNIEAARLLCQKAAALKDAGDPQSILATWH------AKY 316

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +C KM   V +EA++  G +G   E  + R+YR++  N I+ GS
Sbjct: 317 FCAKMVVQVASEAVQIHGANGCTNEYPVERYYRDAKINEIIEGS 360


>gi|17545192|ref|NP_518594.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427483|emb|CAD14001.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 595

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 161/391 (41%), Gaps = 64/391 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T  + + + PK+ S E+  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257
           D+  + ++ + ++DG Y ++G K F+S+    +SD  I L         A  +G +  F+
Sbjct: 174 DLGILRTRAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKG-ISLFV 232

Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N     +  M
Sbjct: 233 VPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVM 292

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------V 354
                L   +  +    V+   +  YA+ R     +SG    D+P              +
Sbjct: 293 MNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLL 352

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +RA A+     A   AL      S  +   R E A    ++ P+ K +    A     E
Sbjct: 353 TQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNE 412

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            M+  GG GYI E  + ++ R++  N I  G+     LD+L                +  
Sbjct: 413 GMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG-------------RKILG 459

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           D+G+  KK   I++D +     ++ +  F+ 
Sbjct: 460 DMGAKMKKFGKIVQDFVEAEGTNEAMQEFVN 490


>gi|159184345|ref|NP_353529.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159139661|gb|AAK86314.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 598

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   T    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+    M+D  +  ++A++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFI 231

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  EDG+    NG+    +++K+G   NAT  + + +  G+LLG  N     +  M
Sbjct: 232 VPKFLVKEDGTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360
                L   +  +S   ++   A+ YAR     R +SG    D+        P ++R + 
Sbjct: 292 MNEARLGVGLQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLM 351

Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            I     A       TAL   +A+   + K R        ++ PI K             
Sbjct: 352 TIKAYNEAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  ++++ R++    I  G+     LD++                  +
Sbjct: 412 AQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            LG + G+ V+ + ++    C+E++       EK++L +      + G+ND+
Sbjct: 455 KLGMNGGRAVMALFKEIGDFCEENRA-----DEKLSLYTKG---LKKGLNDL 498


>gi|119774878|ref|YP_927618.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B]
 gi|119767378|gb|ABL99948.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B]
          Length = 578

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 41/338 (12%)

Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S+T+ + +A+    T  +   + PK++S E+             A  + +TE + G+D+ 
Sbjct: 130 SLTAGAALAINAHGTEELKSTYLPKLYSGEW-------------AGAMDMTEPQAGSDLR 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--VGCFLVPRLLEDG 265
            I ++ +   DG Y ++G K F++    D       ++LA++ G   +  FLVP++  D 
Sbjct: 177 HIRTRAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDD 236

Query: 266 S-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                 PNG+    +++K+G + +AT  + F +  G+L+G  N     +  M     L  
Sbjct: 237 QGNLTEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAI 296

Query: 321 AIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVM-----------KRAIADIALDI 366
            I  +   + ++  A  YAR R   +  G      P++            R + D    +
Sbjct: 297 GIQGLGSAQAAVQMASDYARERLQGNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRAL 356

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T     LA   D+   +++   Y  ++ P+ K +       +   A +  GG GYI 
Sbjct: 357 AVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLDITIMAQQVFGGHGYIR 416

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E  I +  R++    I  G+     +D L     G NL
Sbjct: 417 ETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 454


>gi|17988840|ref|NP_541473.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|17984662|gb|AAL53737.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 617

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 146 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 192

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 193 DLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 252

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 253 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 312

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 313 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 372

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 373 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 432

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 433 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 472


>gi|134293268|ref|YP_001117004.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134136425|gb|ABO57539.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 596

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPMLTDGAIEALLTAGSDEQKARYVPKMISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D++ + S+ +   DG Y + G K F++     M++  I  +LA+  G       +  F+V
Sbjct: 171 DLSMVRSRAEPQQDGSYKVFGTKIFITWGEHDMTENIIHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G + + T  L+F +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGARNDVQCVSIEHKLGIKGSPTAVLQFGDHGGATGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ +S A   +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGLQGVGISEAAYQKAVEYAKERVQSRPVDGSAKEAVTIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ D +  IA   A    +A+  ++A +R+   A    + PI K W  +++  V 
Sbjct: 348 LGTMRALTDASRAIAYVAAAHNDIAHQHEDAATRAHHQAIYEFLVPIVKGWSTELSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A+ YR+S   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQFYRDSRILTIYEGT 441


>gi|311103476|ref|YP_003976329.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758165|gb|ADP13614.1| acyl-CoA dehydrogenase, middle domain protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 593

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 170/383 (44%), Gaps = 71/383 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P +     P++ S E+  T             + LTE   G+D+ A+ ++   + DG Y
Sbjct: 141 SPALKDQLLPRLISGEWTGT-------------MNLTEPAAGSDLGAVRTRATPLEDGSY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL--EDGSP---NGL 270
            +SG K F++    D       ++LA+      G  G   F VP+ L  +DGSP   N +
Sbjct: 188 AISGQKIFITYGDHDLASNIIHLVLARTPDAPAGAKGLSLFAVPKYLIQDDGSPGARNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               L++K+G  ++ T  ++F       G+L+G+LN        M + + ++ A  +V  
Sbjct: 248 HCSALEHKLGIHASPTAVMQFGAGQGATGYLVGELNQGL-----MNMFVMMNEARCAVGN 302

Query: 328 MRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSF 374
             +++AE     A+ YAR R     +        ++  P ++R +  +   I +  AL  
Sbjct: 303 QGLAVAERAFQHAVWYARERSQGKVVGEEGAALPILRHPDVRRLLLSMKSRIESMRALGM 362

Query: 375 RLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            L+   D A +      RS   A   ++ P+ K W  + A  +  +A++  GG G+IEE 
Sbjct: 363 YLSMQRDLAHAGADLEVRSRAQARIDLLIPVMKGWFTETAQRITYDAVQVFGGMGFIEET 422

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQLFSTL--E 473
             A++YR++   +I  G+      D+L              LL++ + L E + +     
Sbjct: 423 GAAQYYRDARILTIYEGTTAIQANDLLGRKTVRDSGAQATLLLDEISQLAEAMLAGAAPA 482

Query: 474 QDLGSSGKKVITILRDSISLCKE 496
           ++ G S ++  T LR++I+   E
Sbjct: 483 REFGRSLRQGCTHLRETIAWLLE 505


>gi|329851455|ref|ZP_08266212.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328840301|gb|EGF89873.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 596

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 183/434 (42%), Gaps = 71/434 (16%)

Query: 109 RSIHDGLHCSIWDR-SFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           R  +  L  + W   S +P    Q   H +  A   +++   +   M P +T  ++ AL 
Sbjct: 80  REAYKALSEAGWTALSGDPAYGGQGLPHFVNTAFSEMLSGASSAFGMYPGLTEGAISALT 139

Query: 166 TT-PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               +  KD + PK+ S E+  T             + LTE   GTD+  + S+    +D
Sbjct: 140 AGGTQAQKDVYLPKLISGEWSGT-------------MNLTEPHCGTDLGLLRSKAVPAAD 186

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP--- 267
           G Y +SG K ++S+   D       ++LA++EG       +  F+VP+ + D  G+P   
Sbjct: 187 GSYRISGQKIWISAGEHDFTSNICHLVLARIEGAPEGVKGISLFMVPKFIPDADGNPGER 246

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N L    L++K+G   N+T  + +    GFLLG       P E +KI+ Y+ +A     G
Sbjct: 247 NSLHCAGLEHKMGIHGNSTCVMVYEEAKGFLLG------APNEGLKIMFYMMNAARYGVG 300

Query: 328 MR------VSLAEAIHYARRR-------------HVSGGILIDQPVMK-----RAIADIA 363
           ++       S   A  +A+ R               +  IL+   V +     RA+ +  
Sbjct: 301 LQGLAIGHASYVAAAEFAKDRLQGRALTGPKSPEKPADSILVHPDVRRMLLESRALIEGG 360

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                  AL     ++ ++ K R + + +  ++ P+ K +  +    V  +AM+  GGSG
Sbjct: 361 RAFLTWVALQADFQHAAEDEKDREKASDFMSLLTPVLKAYLTEKGLKVTQDAMQVHGGSG 420

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE-----QDL 476
           + E    +++ R+     I  G+     LD++   L  KG    +     ++     ++ 
Sbjct: 421 FTEHFPASQYMRDVRITLIYEGTNGVQALDLVGRKLPSKGGRAMQSFLGEIDAYIAAEEA 480

Query: 477 GSSGKKVITILRDS 490
           GS+  + I  L+++
Sbjct: 481 GSAVPQYIKALKET 494


>gi|154252131|ref|YP_001412955.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156081|gb|ABS63298.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 616

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 159/381 (41%), Gaps = 71/381 (18%)

Query: 152 MSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+A+  AL  T  P + +  A K+ + E+  T             + LTE   GT
Sbjct: 125 MYPGLTNAAYSALWATGEPWMREHVAKKMIAGEWTGT-------------MCLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR----------VG 254
           D+  + ++  +  DG Y ++G K F+S     M+D  I  ++A++ G           V 
Sbjct: 172 DLKLMKTKAVEQEDGTYRITGTKIFISGGDHDMTDNIIHMVIAKIPGEDGKLANDLSTVN 231

Query: 255 CFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNV 304
            F+VP++L      E    NG+    ++ K+G + NAT  L F +   + LG    +   
Sbjct: 232 FFMVPKMLVNKETGEITGRNGVSCGSIEKKMGIKGNATAVLNFDDAVAYRLGGAPKEKKT 291

Query: 305 STGPVEDMK------ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGIL 349
            TG V+  K      +   ++ A M V    +++ E      + YA  R     ++G   
Sbjct: 292 ETGEVKKSKSAGMAGMFGMMNGARMGVGIQGIAIGEVAYQNGVTYANERLAGRSLTGAKN 351

Query: 350 IDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            D P              +  RA  + A  +A   ++ F L     + K R E A  A++
Sbjct: 352 PDGPADPIMVFPDVRRLLISSRAFVEGARALAMYVSMLFTLQVFGKDEKEREEAADMAQL 411

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M P+ K +          +AM+  GG GY+ +  + +  R++  N +  G+     LD++
Sbjct: 412 MTPVIKAFFTDRGFQAANDAMQVFGGHGYVRDHGMEQFVRDARINQVYEGANGIQALDLV 471

Query: 456 N--LLEKGTNLFEQLFSTLEQ 474
              +  KG       F+ LE+
Sbjct: 472 GRKMTAKGGRATMTFFAKLEE 492


>gi|225686562|ref|YP_002734534.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|256043671|ref|ZP_05446596.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111292|ref|ZP_05452318.1| acyl-COA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256262301|ref|ZP_05464833.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564861|ref|ZP_05835346.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990091|ref|ZP_06102648.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265992798|ref|ZP_06105355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|225642667|gb|ACO02580.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|260152504|gb|EEW87597.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763668|gb|EEZ09700.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000760|gb|EEZ13450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092027|gb|EEZ16324.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410948|gb|ADZ68012.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M28]
 gi|326554239|gb|ADZ88878.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M5-90]
          Length = 597

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|224825621|ref|ZP_03698726.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602542|gb|EEG08720.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 594

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 59/355 (16%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+   TP     +  K+ S E+  T             + LTE + G+
Sbjct: 125 LCPMLTQGALEALLHHGTPEQQNAYLAKLVSGEWTGT-------------MNLTEPQAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------VEGRVGCFL 257
           D++A+ S+     D  Y + G K F++    D       ++LA+       V+G +  F+
Sbjct: 172 DLSAVRSRAMP-EDDHYRIFGSKIFITWGEHDVTENIVHLVLARLPDAPAGVKG-ISLFV 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           VP+ L   DG+P   N +    L++K+G   + T  L F  +    G+L+G+ N     +
Sbjct: 230 VPKYLLNADGTPGTRNDVQCVSLEHKLGIHGSPTAVLAFGESAGAIGYLVGEPNRG---L 286

Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR-------HVSGGILIDQPVMKRAI 359
           E M  ++      + + G+ +S     +A  YAR R       H S G +I  P ++R +
Sbjct: 287 EYMFTMMNHARLAVGLEGVAISERAYQQARDYARERVQGRALGHESAGPIIRHPDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIA 413
             +     A  AL++  A   D A   ++ A  AR      ++ P+ K WC + A  V +
Sbjct: 347 MTMKSQAEAMRALAYVTAAYMDLAARHTDPAERARYQSRVELLTPVVKGWCTETAQEVAS 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLF 465
             ++  GG G+IEE   A+H R++   +I  G+      D+L    L E+G  L 
Sbjct: 407 LGVQVHGGMGFIEETGAAQHLRDARITTIYEGTTGIQANDLLGRKTLREQGRTLL 461


>gi|254476560|ref|ZP_05089946.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
 gi|214030803|gb|EEB71638.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
          Length = 593

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 57/388 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE   GTD+  + ++ +   DG Y ++G K F+SS    M+D  I  +LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPD 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  +DGS    NG+   +++ K+G   N+T  + + +  G+LLG  +
Sbjct: 221 GIKGVSLFIVPKFIVKDDGSLGDRNGVSVGKIEEKMGIHGNSTCVMNYDSATGYLLGTEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351
                +  M     L   +  ++    +   A+ YA+ R     V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALEYAKDRLQGRDVTGAKNPEGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R + D       A A     A   D+A    ++ A   I  + P+ K +      
Sbjct: 341 HPDIRRNLMDQKSFAEGARAFILWGAKMLDQAHRSEDKDADGLISLLTPVIKGFLTDQGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +  +A +  GG GYIEE  ++++ R++    I  G+     LD++              
Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIAD 527
             L QD    GK V+       + CKE+  ++   +++    L +++  L  AGM     
Sbjct: 448 RKLAQD---GGKHVMAFFEMIKNFCKENGDISDAYSKEFIEPLKAASKDLQAAGM----- 499

Query: 528 VFLENRFLDNCHSTHCMLHGRFNAAHII 555
            F++N   +  H+    L G ++  H+ 
Sbjct: 500 YFMQNGMKNPNHA----LAGSYDFMHMF 523


>gi|325292117|ref|YP_004277981.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325059970|gb|ADY63661.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 594

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 180/439 (41%), Gaps = 59/439 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE V+    QE  R A      L   G   G    D KV     W  L RR    G + 
Sbjct: 31  LGEDVVDAILQEAGRFATEQVAPLADIGDRQGARLSDGKVSTPDGWADLYRRWAEAGWNS 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175
                 F    +   H +  A L +         ++P++T  ++ AL+   +  + + + 
Sbjct: 91  LTAPEEFGG--QNLPHMLNVAALEMWNSGSMAFALAPTLTMGAVEALVAHGSNDLKRIYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K F+
Sbjct: 149 PKLVSGEWTGT-------------MNLTEPHAGSDLGVLKTRAERNGDGTYRIFGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DG+P   N +    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLPEDDGTPGSRNDVFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + F +          G+L+G+ N     +  M     L   +  V+    +
Sbjct: 256 GIHGSPTCTMIFGDGKFGEEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAICEAA 315

Query: 332 LAEAIHYARRR--------HVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +AI YAR R          SG   +I+ P + R +  +      A A+SF  A++ D 
Sbjct: 316 TQKAIEYARERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGARAISFNCAHAIDM 375

Query: 383 AKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +      R+     A ++ PI K +       V +  ++  GG G+IEE   AR+ R+
Sbjct: 376 AHAAEDVAERAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGGMGFIEETGAARYLRD 435

Query: 437 SPANSILLGSGNAMVLDVL 455
           +    I  G+     +D++
Sbjct: 436 ARIAPIYEGTNGIQAIDLV 454


>gi|238028608|ref|YP_002912839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           glumae BGR1]
 gi|237877802|gb|ACR30135.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1]
          Length = 595

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ + I DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPIGDGAYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R              +   +I  P ++R +         A A ++  A  
Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQ 371

Query: 380 FDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454


>gi|71905869|ref|YP_283456.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71845490|gb|AAZ44986.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 592

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 31/277 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   G+D+AAI+S+ + + DG Y +SG K F++    D       ++LA++     
Sbjct: 162 MNLTEPNAGSDLAAISSKAKAVGDGTYLVSGTKIFITWGEHDVAENIIHLVLARLPDAPP 221

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLG 300
               +  FLVP+ L  +DGS    N L    +++K+G   + T  + +       G+L+G
Sbjct: 222 GLKGISLFLVPKFLVNDDGSLGARNDLICASIEHKLGIHGSPTAVMSYGEKEGAIGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-------- 352
           + N   G +  M     ++  +  V     +   A+ YAR R V GGI+ D+        
Sbjct: 282 EENKGIGYMFTMMNHARVNVGLEGVGIAERAYQHALWYARER-VQGGIIGDKSGEKKPIL 340

Query: 353 --PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAP 409
             P ++R + D      A   L++  A + D+A +    A     ++ P+ K W  +   
Sbjct: 341 HHPDVRRLLMDCKARTEAMRTLAYYGAANIDKAHAGDAAAQARIDLLTPVIKGWSTEQGV 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + + A++  GG G++EE   A++YR+S   +I  G+
Sbjct: 401 ELSSTALQVFGGVGFVEETGAAQYYRDSRITTIYEGT 437


>gi|254465622|ref|ZP_05079033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
 gi|206686530|gb|EDZ47012.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
          Length = 567

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 36/322 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA++ +G  G      FLVP+ L D     G  N L    L++K+
Sbjct: 197 SWGDNDFCENICHLVLARLPDGAPGTKGISLFLVPKFLPDADGNPGKANDLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G  +     +  M     L      V     +   A+ YA
Sbjct: 257 GLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLGVGGQGVGAGEGAYQHALAYA 316

Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYAR 394
             R     + G++ D   ++R + ++  D+ A+ A+    A + D   +  E+  AA A 
Sbjct: 317 LERKQGKSASGVIADHADVRRMLMEMKADLFASRAILLACAQAIDMQTATGEKDWAARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI K +       V    ++  GG G+IEE   A++YR+    +I  G+     +D+
Sbjct: 377 FLTPIAKAFGTDTGIRVSETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQSMDL 436

Query: 455 L--NLLEKGTNLFEQLFSTLEQ 474
           +   +++ G   F  +    EQ
Sbjct: 437 VARKMMDGGETAFALIDEIEEQ 458


>gi|299140247|ref|ZP_07033413.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298597786|gb|EFI53958.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 383

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 41/288 (14%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W PK+                S+     L+E   G+D  A+  +  +  DG Y L+G
Sbjct: 109 KKSWLPKL--------------AESLTGAYALSEAVSGSDAFALQCRAARQEDGDYLLNG 154

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K W  ++  +  F++ A ++   G     CFLV    E G+P G    R ++K+G R++
Sbjct: 155 SKLWITNAVEAGLFLVFATLDATAGYKGITCFLV----EKGTP-GFTLGRKEDKLGIRAS 209

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHY 338
           +T EL FSN     +   NV   P +  KI I  L+   + +    V LA      A  Y
Sbjct: 210 STCELLFSNC---RVPAANVLGEPGKGYKIAIETLNEGRIGIGAQLVGLASGAWRHAARY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  L +   M+  +A +A+D+ AA  + +  A   D      +EAA A++ A 
Sbjct: 267 ARERKQFGKPLAEFQAMQFQLARMAMDVEAARLMVYNAARLKDSGVEYLKEAAMAKLFA- 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  ++A    + A+E  GG+G+++E  + + YR++    I  G+
Sbjct: 326 ------SEVAERTASLAVEVFGGAGFVKEYPVEKLYRDAKIGKIYEGT 367


>gi|289572449|ref|ZP_06452676.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis K85]
 gi|289536880|gb|EFD41458.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis K85]
          Length = 370

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 8/115 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE+ GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  
Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPV 309
           FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL G+ +   GPV
Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPV 307


>gi|320333832|ref|YP_004170543.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319755121|gb|ADV66878.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 599

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 51/405 (12%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAP 190
           H +  A + +M        M P ++  +  AL  + +  +   + PK+ + E+  T    
Sbjct: 111 HLVGNALVEMMNSANVAWSMYPGLSHGAYSALAAVGSDDLKATYLPKLVNGEWTGT---- 166

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--M 245
                    + LTE   GTD+  I ++ +   DG Y ++G K F+S+    M+D  +  +
Sbjct: 167 ---------MCLTEPHAGTDLGIIRTRARDNGDGTYAITGTKIFISAGEHDMADNILHLV 217

Query: 246 LAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           LA++EG       +  FLVP+ L +     G  N +    +++K+G   NAT  L F + 
Sbjct: 218 LARLEGSPEGTKGISLFLVPKYLVNADGTLGERNTVVCGSIEHKMGIHGNATAVLNFDDA 277

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------H 343
            G+L+G+LN     +  M     L + +  +    V+   A+ YA+ R            
Sbjct: 278 KGYLVGELNKGMNHMFIMMNAARLGTGLQGLGIGEVAYQNAVAYAKDRLQMRAPQRVRPD 337

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMA 397
            +   +I  P ++R +        A  AL+  LA S D      +   R E      ++ 
Sbjct: 338 EAADPIIVHPDVRRMLLTAKAYTEAGRALAMWLALSLDVEHHHPDDAKRKEAGDLVALLT 397

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K +           A +  GG GYI+E  + +  R++    I  G+     LD++  
Sbjct: 398 PIAKAFMTDNGFQSAVLAQQVFGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLIGR 457

Query: 457 -LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKG 499
            +L  G    ++L   LE  L  + G + +    D++S   +  G
Sbjct: 458 KVLMDGGRKLQKLAGMLETFLEENEGNEDLAPYLDTLSRAAQQVG 502


>gi|294675962|ref|YP_003576577.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           capsulatus SB 1003]
 gi|294474782|gb|ADE84170.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB
           1003]
          Length = 560

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 34/323 (10%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T   + AL    +  +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LNPLLTQGQIEALEHHASEEIKALYIPKLISGEWSGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+ A+ S+ + + DG Y ++G K F+S   SD       ++LA++         +  F+V
Sbjct: 171 DVGALRSRAEPLGDGTYAITGQKIFISWGDSDVTENICHLVLARLPDASPGTKGISLFMV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D     G  N L    L++K+G   + T  + F    G+++G+       +  M 
Sbjct: 231 PKYIPDAAGKPGVANTLGVVSLEHKMGLHGSPTCVMSFEAAKGWMVGEPGKGMAAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L   +  +     +  +A+ YA+ R V    +I    ++R +A++  +I AA +++
Sbjct: 291 NNARLAVGVQGIGVAEAAFQQALAYAQER-VQFSQIIQHADVRRMLAEMRAEIFAARSIA 349

Query: 374 FRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              A + D  ++  E+   AR  ++ PI K +       V  + ++  GG G+IE+   A
Sbjct: 350 LACAVALDLGRATGEDHWLARAALLTPIAKAYGTDTGIWVAEQGVQVHGGMGFIEQTGAA 409

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           ++ R+    +I  G+     +D+
Sbjct: 410 QYCRDVRVTAIYEGTNGIQAMDL 432


>gi|83941397|ref|ZP_00953859.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
 gi|83847217|gb|EAP85092.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
          Length = 571

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 51/364 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y +SG K ++
Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQKVYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +   +D       ++LA++ G       +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 197 TWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNDDGSLGNANSLKVVSLEHKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-- 337
           G   + T  +++    G+L+G      G +  M     +++A + V G  + +AEA +  
Sbjct: 257 GIHGSPTCVMQYDKATGWLVGP---EQGGMAAM--FTMMNNARLGVGGQGIGIAEAAYQH 311

Query: 338 ---YARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385
              YA  R           G ++D   ++R +  +  +  AA A++   A + D   A  
Sbjct: 312 ALAYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATG 371

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++E  A A  + PI K +      AV    ++  GG G+IEE   A++ R+    +I  G
Sbjct: 372 QAEWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEG 431

Query: 446 SGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503
           +     +D V   +  G     +L   +E D   + + V   + D++    E  +    +
Sbjct: 432 TNGIQAMDLVARKMMDGGEAANRLLDEIEAD-AEAARDVFPNMTDALWQASETLREATDW 490

Query: 504 LTEK 507
           LTE+
Sbjct: 491 LTEQ 494


>gi|260461928|ref|ZP_05810173.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032175|gb|EEW33441.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 596

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 75/412 (18%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++T  T      W P++    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKAKWLPRMVEGAWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+    MSD  +  +LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHDMSDNIVHLVLARIEGAPEGVKGISLFI 231

Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+L  D  G+P   N L    ++ K+G   N+T  + +    G LLG+ N     +  M
Sbjct: 232 VPKLKLDASGNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEANGGLKAMFTM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM---------- 355
                L   +  +S   ++   A+ YA+     R +SG    D+   P++          
Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVAYAKDRLQGRSLSGPKAPDKKADPIIVHPDIRRSLM 351

Query: 356 -KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             RA  +    +A  TA+   +A+   + K R     Y  +M P+ K             
Sbjct: 352 TMRAFNEAGRALALWTAIKSDVAHRSGDDKDRQAADDYTGLMTPVVKGVLTDKGFDHTVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  +++  R++    I  G+     LD++                  +
Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            LG + G+ V    ++    C+E++       EK+A  + A    + G+ND+
Sbjct: 455 KLGLNGGRAVQAFFKEVGEFCEENRA-----DEKMAPFTKA---LKKGLNDL 498


>gi|312797296|ref|YP_004030218.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169071|emb|CBW76074.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 595

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 54/348 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ S ++  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELQQRYLPKLVSGQWTGT-------------MCLTEPHCGTDLGILRTRAEPNGDGSY 190

Query: 227 CLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNG 269
            ++G K F+SS    ++D  + L         A  +G +  F+VP+ + D     G  NG
Sbjct: 191 SITGTKIFISSGEHDLADNIVHLVLARLPDAPAGTKG-ISLFIVPKFIPDDNGEPGQRNG 249

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    +++K+G   NAT  +   +  G+L+G+ N     +  M     L   +  +    
Sbjct: 250 VKCGSIEHKMGIHGNATCVINLDDARGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTE 309

Query: 330 VSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLA 377
           V+   ++ YAR+R     +SG          +I  P ++R +      + A  A ++  A
Sbjct: 310 VAYQNSLAYARQRLQMRSLSGPKAPDKAADPIIVHPDVRRMLLTQKAYVEAGRAFTYWAA 369

Query: 378 NSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              D+  S  +EA          ++ P+ K +    A      AM+ +GG GYI E  I 
Sbjct: 370 LQIDKELSHEDEAVRRDAADLVALLTPVIKAFLTDNAFEATNNAMQVLGGHGYIAEWGIE 429

Query: 432 RHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDL 476
           ++ R++  N I  G+     LD+L    L + G  L  + F  L QD 
Sbjct: 430 QYVRDARINMIYEGTNTIQSLDLLGRKVLGDMGAKL--KKFGKLVQDF 475


>gi|259415225|ref|ZP_05739147.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259349135|gb|EEW60889.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 570

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 39/325 (12%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y +SG K F+
Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALSSKAEDNGDGTYAVSGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVP+ L  E+G+P   N L    L++K+
Sbjct: 197 SWGDNDFTENVCHLVLARLPDGVPGTKGISLFLVPKYLPDENGNPGKANSLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G  +     +  M     L      V     +   A+ YA
Sbjct: 257 GLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLGVGGQGVGAAEGAYQHALSYA 316

Query: 340 RRRH-----VSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEA 390
             R      V G  G ++D   ++R + ++  D+ A+ A+    A + D   A   +E  
Sbjct: 317 LDRKQGKTPVEGGTGTIVDHADVRRMLMEMKADVYASRAIMLACAGAIDMGTATGDAEWK 376

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A  + PI K +  +    V  + ++  GG G+IEE   A+ YR+    +I  G+    
Sbjct: 377 TRAAFLTPIAKAFGTETGIRVSEQGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQ 436

Query: 451 VLD-VLNLLEKGTNLFEQLFSTLEQ 474
            +D V   +  G  +  +L   +E+
Sbjct: 437 AMDLVARKMMDGGEMAHRLIDEIEE 461


>gi|62317369|ref|YP_223222.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269345|ref|YP_418636.1| sugar transporter family protein [Brucella melitensis biovar
           Abortus 2308]
 gi|189022621|ref|YP_001932362.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|237816921|ref|ZP_04595913.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|254690868|ref|ZP_05154122.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695821|ref|ZP_05157649.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698649|ref|ZP_05160477.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732096|ref|ZP_05190674.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 4 str.
           292]
 gi|256256053|ref|ZP_05461589.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260544605|ref|ZP_05820426.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756450|ref|ZP_05868798.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260759882|ref|ZP_05872230.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763120|ref|ZP_05875452.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882272|ref|ZP_05893886.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261216241|ref|ZP_05930522.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297249407|ref|ZP_06933108.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197562|gb|AAX75861.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939619|emb|CAJ12608.1| Sugar transporter superfamily:Acyl-CoA dehydrogenase,
           C-terminal:Acyl-CoA dehydrogenase, central domain
           [Brucella melitensis biovar Abortus 2308]
 gi|189021195|gb|ACD73916.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|237787734|gb|EEP61950.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|260097876|gb|EEW81750.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670200|gb|EEX57140.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673541|gb|EEX60362.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676558|gb|EEX63379.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260871800|gb|EEX78869.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917848|gb|EEX84709.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297173276|gb|EFH32640.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 597

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +     +DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+V
Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232

Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  L E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKSILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG +        +I  P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL   +A   D A    +EA          ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE+ ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|126740734|ref|ZP_01756420.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
 gi|126718249|gb|EBA14965.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
          Length = 593

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 178/417 (42%), Gaps = 70/417 (16%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M   +T  +  A++   T      + PK+ S E+  T             + LTE   G
Sbjct: 123 VMYQGLTHGAAAAILAHGTDEQKDSYLPKMISCEWTGT-------------MNLTEPHCG 169

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++ +   DG + +SG K F+S+    MSD  I  +LA++ G       V  F+
Sbjct: 170 TDLGLMRTKAEPQDDGSFKISGQKIFISAGDHDMSDNVIHLVLAKIPGGPEGIKGVSLFI 229

Query: 258 VPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+  L  DG+P   NG+    ++ K+G   N+T  + +    G+LLG  +     +  M
Sbjct: 230 VPKFKLKADGTPGERNGVAVGNIEKKMGIHGNSTCVMNYDEATGYLLGSEHKGMRAMFTM 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LIDQPVMKRAIA 360
                L   +  VS    +   A+ YA+ R     V+G          LI  P ++R++ 
Sbjct: 290 MNEARLGVGMQGVSQAEAAYQNAVEYAKDRLQGRDVTGAKNPEGPADPLIVHPDIRRSLM 349

Query: 361 DIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMEC 418
           D         A     +   D+A +  S++A     ++ P+ K +       +  +A + 
Sbjct: 350 DQKSFAEGGRAFLLWGSTMIDQAHRDESKDADGLISLLTPVIKGFLSDEGYDMTVKAQQV 409

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG GYIEE  ++++ R++    I  G+     LD++                  + LG+
Sbjct: 410 FGGHGYIEEHGMSQYTRDARIAQIYEGANGVQALDLVG-----------------RKLGA 452

Query: 479 SGKKVITILRDSI-SLCKEDKGLAR-FLTEKIA-LASSAAALYRAGMNDIADVFLEN 532
            G K +    D I + CK++  L+  +  + IA L +++  L  AGM      F++N
Sbjct: 453 DGGKHVMAFFDLIKNFCKDNAELSEDYARDFIAPLKAASKDLQAAGM-----YFMQN 504


>gi|254511130|ref|ZP_05123197.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221534841|gb|EEE37829.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 567

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 34/301 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ + E+  T             + LTE + G+D+ A+T++ +  SDG Y ++G K ++
Sbjct: 150 PKMMAGEWSGT-------------MNLTEPQAGSDVGALTAKAEDNSDGTYSVTGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVP+ +  E+G+P   N L    L++K+
Sbjct: 197 SWGDNDFCENVCHLVLARLPDGVPGTKGISLFLVPKHIPDENGNPGVANDLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G  +     +  M     L      V     +   A+ YA
Sbjct: 257 GLHGSPTCVMQYDGARGWLVGKEHGGMAAMFTMMNNARLGVGGEGVGVAEGAYQHALAYA 316

Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R       G +ID   ++R +  +  D+ AA A+    A + D  +A   ++ AA A 
Sbjct: 317 LERKQGKTPSGTIIDHADVRRMLMSMRADVFAARAIMLANAAAIDMAQATGDADWAARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ PI K +  +    V    ++  GG G+IEE   A++YR+    +I  G+     +D+
Sbjct: 377 LLTPICKAFGTETGMRVAETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQAMDL 436

Query: 455 L 455
           +
Sbjct: 437 V 437


>gi|163732339|ref|ZP_02139785.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           litoralis Och 149]
 gi|161394637|gb|EDQ18960.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           litoralis Och 149]
          Length = 564

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 28/279 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE + G+D+ A++S+ Q   DG Y ++G K ++S    D       ++LA++     
Sbjct: 161 MNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIYISWGDHDVADNICHLVLARLPNAPA 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ + +     G+ N +    L++K+G   + T  +++    G+L+G+  
Sbjct: 221 GTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHKLGLHGSPTAVMQYDAATGWLIGE-- 278

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
              G +  M     +++A + V G    +AE     A+ YAR R      +++   ++R 
Sbjct: 279 -KEGGMAAM--FTMMNNARLGVGGQGTGVAEAAYQQALSYARERKQGKSAIVNHADVRRM 335

Query: 359 IADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +  +  DI AA  +    A + D   A   ++  A A ++ PI K +      AV    +
Sbjct: 336 LGTMKADIYAARVIGLTCAVAIDMAHATGSADWQARAALLTPIAKAFGSDTGIAVADAGI 395

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  GG G++EE   A+  R+    +I  G+     +D++
Sbjct: 396 QVHGGMGFVEETGAAQFSRDVRVTAIYEGTNGIQAMDLV 434


>gi|312376076|gb|EFR23271.1| hypothetical protein AND_13184 [Anopheles darlingi]
          Length = 404

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 27/276 (9%)

Query: 184 DPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241
           D  N+   +  S  IG   L+E   G+D+AA+T++  + SDG + L+G K W  S   + 
Sbjct: 124 DQRNRFFSKYPSDTIGAFALSEAGAGSDVAAMTTRAAQSSDGSWLLNGRKAWVTSGVEAV 183

Query: 242 AFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           A I+   ++  +G      FLV    E+    GL   R ++K+G R  +T +L   N   
Sbjct: 184 AGIVFGTIDASLGYKGISAFLVD--FEEAKAKGLSLGRPEDKLGIRGTSTCDLVLENVSI 241

Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                 G + G + ++   ++  +I I    A  ++   + SL E++ YA++R   GG L
Sbjct: 242 PAENVLGPVGGGMRIAMEQLDRARIGI----ASQAIGIAQASLEESVAYAKQRTAFGGTL 297

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           ID P ++  IA+I + I  A  L  + A   D  +  ++  + A+ +A  T  +      
Sbjct: 298 IDLPAVRTRIAEIGMRIETARLLVRKAAGEVDRGQRATKACSMAKWVAGETATFAAH--- 354

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  + +GG GYI+     R YR++    I  G
Sbjct: 355 ----GCQQIMGGMGYIKNLPAERFYRDARITEIYGG 386


>gi|255264517|ref|ZP_05343859.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
 gi|255106852|gb|EET49526.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
          Length = 567

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 39/365 (10%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T   + AL    +  + + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LNPLMTQGQIEALEHHASDAIKELYLPKLISGEWCGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VEGRVGC--FLV 258
           D+ A+ S+ +   DG + +SG K ++S   +D       ++LA+    V+G  G   F+V
Sbjct: 171 DVGALRSKAEPNGDGTFKISGQKIYISWADNDFTENVCHLVLARLPDAVDGVKGISLFMV 230

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   N L    L++K+G   + T  +E+ N  G+L+G+ +     +  M 
Sbjct: 231 PKRIPDENGAPGVANSLRVVSLEHKMGLHGSPTAVMEYDNAVGWLIGEEHAGLAAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSG-GILIDQPVMKRAIADIALDIAAA 369
               L   +  V     +   A+ YA  R     SG G +I+   ++R +A +  DI AA
Sbjct: 291 NNARLGVGVQGVGVAEGAYQHAVTYAMDRKQGKASGAGTIIEHADVRRMLASMKTDIFAA 350

Query: 370 --TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              ALS  +A   ++A    E    A  + PI K +  ++   V  + ++  GG G+IEE
Sbjct: 351 RGIALSCAVAIDMEQATGDVEWRDRAAFLTPIAKAFGTEVGMDVSHQGIQVHGGMGFIEE 410

Query: 428 RSIARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              A++ R+    +I  G+     +D V   +  G     +L   +EQ    + K    +
Sbjct: 411 TGAAQYSRDVRVTAIYEGTNGIQAMDLVARKMMDGGEAAMRLLDEIEQ-AAETAKATFPV 469

Query: 487 LRDSI 491
           L + +
Sbjct: 470 LAEQV 474


>gi|53724999|ref|YP_102032.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67642503|ref|ZP_00441259.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|121600694|ref|YP_994044.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385804|ref|YP_001028292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126449791|ref|YP_001081936.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|251767556|ref|ZP_02267698.2| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|254177110|ref|ZP_04883767.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254203718|ref|ZP_04910078.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254208693|ref|ZP_04915041.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|52428422|gb|AAU49015.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121229504|gb|ABM52022.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124293824|gb|ABN03093.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126242661|gb|ABO05754.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147745230|gb|EDK52310.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147750569|gb|EDK57638.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|160698151|gb|EDP88121.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238523668|gb|EEP87105.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|243062317|gb|EES44503.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 595

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 57/328 (17%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDLSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+L+G+ N          + + +++A + V    + 
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLN-----AMFVMMNAARLGVGMQGLG 306

Query: 332 LAEAIH-----YARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSF 374
           L EA +     YA+ R     ++G    D+P         ++R +         A A ++
Sbjct: 307 LTEAAYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTY 366

Query: 375 RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   D+A S ++EA          ++ PI K +    A      AM+  GG G+I E 
Sbjct: 367 WSALQIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEW 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            + ++ R++  N I  G+ +   LD+L 
Sbjct: 427 GMEQYVRDARINMIYEGTNSVQALDLLG 454


>gi|260433041|ref|ZP_05787012.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416869|gb|EEX10128.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 605

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 153/368 (41%), Gaps = 59/368 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASTILAHGTDEQKNTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264
            +   DG Y ++G K F+SS    M+D  I  +LA++ G       V  F+VP+ L  ED
Sbjct: 179 AEPQGDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVNED 238

Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           GS    NG+   +++ K+G   N+T  + +    G+LLG  +     +  M     +   
Sbjct: 239 GSLGERNGVSVGKIEEKMGIHGNSTCVMNYDGAVGYLLGQEHKGMRAMFTMMNEARVGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369
           +  ++    +   A+ YA+ R     V+G          LI  P ++R++ D    +  A
Sbjct: 299 MQGLAQAEAAYQNALEYAKDRLQGRDVTGPKNPDGPADPLIVHPDIRRSLMDQKSFVEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D+A    ++ A   I  M P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFILWGATLIDKAHRAGDKDADGLISLMTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             ++++ R++    I  G+     LD++                L QD    GK V+   
Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462

Query: 488 RDSISLCK 495
               + CK
Sbjct: 463 DMVKTFCK 470


>gi|254460812|ref|ZP_05074228.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677401|gb|EDZ41888.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 573

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 51/331 (15%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG + ++G K ++
Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSKAEPNGDGSFSVTGQKIYI 196

Query: 236 SSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKI 279
           S    D       ++LA++ +G  G      FLVP+ L D  G+P   N L    L++K+
Sbjct: 197 SWGDHDVAENVCHLVLARLPDGVAGTKGISLFLVPKYLPDDAGNPGVANTLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           G   + T  ++F    G+L+G      G +  M     +++A + V G  +  AE     
Sbjct: 257 GLHGSPTAVMQFDGAKGWLVGP---EAGGMRAM--FTMMNNARLGVGGQGIGAAEGALQK 311

Query: 335 AIHYARRRHVS-------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385
           A+ YA  R           G ++D   ++R +A +  D+ AA A++   A + D   A  
Sbjct: 312 AMIYACERKQGRSPIENGTGTIMDHADVRRMLAVMKADVFAARAIALMCAAAIDMQSATG 371

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S   A A  + PI K +  +    V    ++  GG G+IEE   A+ YR+    +I  G
Sbjct: 372 SSGWGAKAAFLTPIAKAFGTETGMRVSEMGVQVHGGMGFIEETGAAQFYRDVRVTAIYEG 431

Query: 446 SGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474
           +     +D++   L++ G   F  L   +EQ
Sbjct: 432 TNGIQAMDLVARKLMDGGDAAF-ALLDEVEQ 461


>gi|126459925|ref|YP_001056203.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126249646|gb|ABO08737.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 540

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 18/266 (6%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ-------VEGRVG 254
           TE + G+D+ +  +   +  +  + L G K+F S+  ++DA I+ A+        +G V 
Sbjct: 161 TEVQAGSDLGSTEAVAYQEGERRWRLRGIKYFTSNVGLADAAIITAKPHPPRPGAKG-VA 219

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F  P    DG PN     RLK+K+G  +  T E+E  +T   LLG   V TG    ++I
Sbjct: 220 AFFAPAYRPDGEPNWRIL-RLKDKLGTVTVPTGEVELVDTVAHLLG--TVDTGIYIALEI 276

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +D++   +   R +L EA  Y + R   G  L++ P+  R + ++   + A   L
Sbjct: 277 LTIARIDNSTAGLGLARKALWEAYLYGQERRAFGKRLVEHPLYIRDLVEMEAKLEATLLL 336

Query: 373 SFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + + A  F +A       +    YAR++  I K     ++  V   +ME +GG G++EE 
Sbjct: 337 TLKAAKLFSDASRERPPYTPSYHYARLLTHIVKNMAAWVSIDVTRYSMELLGGIGFLEEF 396

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            +A+ +R++   SI  G+ N   LD+
Sbjct: 397 PLAKLHRDALVTSIWEGTSNIQSLDM 422


>gi|84500240|ref|ZP_00998506.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84392174|gb|EAQ04442.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 575

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 54/380 (14%)

Query: 152 MSPSVTSASMVALMT-TPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T   + AL    P   K+ + P++ S E+  T             + LTE + G+
Sbjct: 124 LNPLLTQGQIEALQHHAPDWMKELYLPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258
           D+ A+T++     DG Y ++G K ++S    D       ++LA++ E   G      F+V
Sbjct: 171 DVGALTTRAVAQDDGTYAVTGQKIYISWGDHDFGGNVCHLVLARLPEAPAGTRGISLFMV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D     G PN L    L++K+G   + T  ++F    G+L+G+ N     +  M 
Sbjct: 231 PKYIPDADGNLGDPNSLRVVSLEHKMGLHGSPTCVMQFDGATGWLVGEENKGMAAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----------HVSGGILIDQPVMKRAIADIA 363
               L   +  +     +L  AI YA  R              G ++D   ++R IA + 
Sbjct: 291 NNARLGVGMQGIGIAEGALQHAIVYALERKQGRTPLEGAEGGTGTILDHADVRRMIATMR 350

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGG 421
            D  AA +++     + D A +  + A  AR   + PI K +       V    ++  GG
Sbjct: 351 ADTFAARSIALACGVAIDMAAATGDAAWKARAAFLTPIAKGFGTDTGMRVSEMGVQVHGG 410

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG---TNLFEQLFSTLEQ-- 474
            GY+EE   A++ R+    +I  G+     +D++   +++ G     L +++ +T E+  
Sbjct: 411 MGYVEETGAAQYSRDVRVTAIYEGTNGIQAMDMVARKMMDGGDAANALIDEISATAEKAR 470

Query: 475 ----DLGSSGKKVITILRDS 490
               +LG S  +    LR++
Sbjct: 471 ADLPELGESLWEAAETLREA 490


>gi|126733241|ref|ZP_01748988.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2]
 gi|126716107|gb|EBA12971.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2]
          Length = 591

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 172/420 (40%), Gaps = 70/420 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+  T             + LTE   GTD+  + ++     DG Y +SG 
Sbjct: 146 QKYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPNGDGSYKISGQ 192

Query: 232 KWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRL 275
           K F+S+    M+D  I  +LA+++G       V  F+VP+ +  +DGS    NG+   ++
Sbjct: 193 KIFISAGEHDMADNIIHLVLAKIQGGPEGIKGVSLFIVPKFMVNDDGSLGQRNGVACGKI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + K+G   N+T  + +    GFL+G+ +     +  M     L   +   +    +   A
Sbjct: 253 EEKMGIHGNSTCVMNYDEATGFLVGEEHKGMRAMFTMMNEARLGVGLQGYAQAESAYQNA 312

Query: 336 IHYA----RRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA    + R V+G          LI  P ++R + D    +  A A +F  A   D A
Sbjct: 313 VAYANDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFVEGARAFTFWGAYLIDRA 372

Query: 384 KSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +  A   I  M P+ K +           A +  GG GYIEE  ++++ R++    
Sbjct: 373 HKNEDADADGLISLMTPVIKGFLTDKGFEYATAAQQVYGGHGYIEEWGMSQYARDARIAM 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD++                L QD    GK V+       +  KE++G  
Sbjct: 433 IYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMIKTFIKENEGNE 476

Query: 502 RFLTEKIA-LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
               E +  L +++  L  AGM           F+ N    +  L G ++  H++  + L
Sbjct: 477 ALNKEFLTPLKAASKDLQAAGM----------YFMQNATKPNNALSGSYDFMHMMGHVCL 526


>gi|149927086|ref|ZP_01915344.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter
           sp. MED105]
 gi|149824307|gb|EDM83527.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter
           sp. MED105]
          Length = 490

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 64/341 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+   + ++ + + PK+ S E+  T             + LTE + G+
Sbjct: 13  LCPLLTDGAIEALLVAGSQQLKETYIPKMISGEWTGT-------------MNLTEPQAGS 59

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+     DG Y +SG K +++    D       ++LA+     EG  G   F+V
Sbjct: 60  DLALVRSKAVPQGDGTYRISGQKIYITYGEHDMAGNIVHLVLARTPDAPEGVKGISLFVV 119

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT--------FGFLLGDLNVS 305
           P+ L  EDGS    N +    +++K+G +++ T  L + +          G+L+G+ N  
Sbjct: 120 PKFLVNEDGSLGKRNDVYCASIEHKLGIKASPTAVLLYGDNKGEVGQGAIGYLVGEENKG 179

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA----RRRHVSGGI-----LID 351
                   + + +++A   V    + LAE     A+ YA    + R V G       +I 
Sbjct: 180 L-----QYMFVMMNAARFQVGVQGIGLAERAYQKAVQYANDRVQSRPVDGSANEAVAIIH 234

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCC 405
            P +KR +  +   + AA A++     ++D A   ++EA      A    M P+ K W  
Sbjct: 235 HPDVKRMLMSMRSQVEAARAMACVAGAAYDAAHFHADEATRKQNMAVYEFMVPLVKGWST 294

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 295 EMSIDVTSTGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 335


>gi|220922793|ref|YP_002498095.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219947400|gb|ACL57792.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 592

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 28/285 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++ + ++ +   DG Y + G K F++    D       ++LA++EG   
Sbjct: 161 MNLTEPQAGSDLSGLRTRAEPAGDGSYRIRGEKIFITWGEHDLTDNIVHLVLARIEGAPA 220

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVS 305
               +  F+VP++L DGS N L    L++K+G   + T  +   E     G+L+G+ N  
Sbjct: 221 GTKGISLFVVPKVLPDGSRNDLRCAGLEHKLGIHGSPTCTMVYGEKGGAVGWLVGEANRG 280

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGI-------LIDQPVMKR 357
              +  M     L   +  V     +  +A+ YAR RR    G        +I+ P ++R
Sbjct: 281 LACMFTMMNNARLCVGLQGVGIAERAYQQALSYARERRQGRAGAAASGMSPIIEHPDVQR 340

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAV 411
            +  +     AA  + +  A + D A    +EA        A ++ P+ K +   +   V
Sbjct: 341 MLLTMKAMTGAARGICYLTAEALDRAHRAPDEAERRAALDRASLLTPVAKAFSTDIGIEV 400

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  ++  GG GY+EE   A+H R++   +I  G+     +D++ 
Sbjct: 401 ASLGIQVHGGMGYVEETGAAQHLRDARIAAIYEGTNGIQAIDLVT 445


>gi|15807352|ref|NP_296082.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460177|gb|AAF11909.1|AE002067_1 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 612

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 36/309 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           +GLTE   GTD+  I ++     DG Y ++G K F+S+   D       ++LA++EG   
Sbjct: 167 MGLTEPHAGTDLGIIRTKASDNGDGTYSVTGTKIFISAGEHDMSENIVHLVLARLEGSPK 226

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ + +     G  NG+    L++K+G   NAT  L F    G+L+G++N
Sbjct: 227 GTKGISLFLVPKFIPNADGSLGERNGVVCGSLEHKMGIHGNATAVLNFDGAKGWLVGEVN 286

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQ 352
                +  M     L + +  +    V+   A+ YA+ R             +  IL+  
Sbjct: 287 KGMNHMFIMMNAARLGTGMQGLGLGEVAYQNALAYAKDRIQMRHEPRVSSEEADPILVHP 346

Query: 353 PVMKRAIADIALDIAAATALSFRL------ANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
            V +  +   A   A      +        ++  DEA+ R E      ++ PI K +   
Sbjct: 347 DVRRMLLTGKAYSEAGRALALWLALNLDIESHHADEAQ-RKEAGDMVALLTPIAKAFMTD 405

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
               V  ++ +  GG GYI+E  + +  R++    I  G+     LD+L   +L  G   
Sbjct: 406 NGFNVAVQSQQVFGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLLGRKVLMDGGKK 465

Query: 465 FEQLFSTLE 473
            ++L  TL+
Sbjct: 466 LQKLAGTLQ 474


>gi|242786918|ref|XP_002480899.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218721046|gb|EED20465.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 608

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 206/512 (40%), Gaps = 97/512 (18%)

Query: 37  YSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
           Y  D  L+ +I+ +     PS +  +L    + VLS         A  N P L      G
Sbjct: 21  YLEDRALLRIISLYLPTPLPSTISSDLLRFSKLVLSKPVLGYIADAEKNLPYLKPLTSFG 80

Query: 92  E--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           E  R D +     W  L    I +G+    ++        K ++  +A     + Q    
Sbjct: 81  EENRDDPLVTSEGWRRLQEIGIEEGIVALAYE--------KNSNGEKAGWNPRIHQFVKY 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY--DP-TNK----------APMQKTSV 196
           H+ S S       A++T P    D A K+  +    DP TN+          +     + 
Sbjct: 133 HIWSGSS------AIVTCPSAMTDGAAKLLGKHLHDDPETNEIFAHARERLISRQNGFAW 186

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD------------GIYCLSGHKWFLSSPMSDAFI 244
             G  +TE++GG+D+    +   K++D            G + + G KWF S+  ++  I
Sbjct: 187 TSGQWMTERKGGSDVRGTETIAVKLNDATDGYDTNGQPLGPWRIDGFKWFSSATDANMTI 246

Query: 245 MLAQVEG-------RVGCFLVP-RLLEDGSP------NGLCYQRLKNKIGNRSNATVELE 290
           +LA+  G       ++  F  P R   +GS       NG+  QRLKNK+G R        
Sbjct: 247 LLAKTGGGSDRKDSQISAFYAPLRRRANGSDENQTELNGIRIQRLKNKLGMR-------- 298

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                G+L+G        +  +  +  + + I +V      LA +  +AR R VSG +L 
Sbjct: 299 -----GYLIGKEGQGVKEISHILNITRMQNIISAVGAYGRGLAISRAFARVRSVSGKLLS 353

Query: 351 DQPVMKRAIADIALDIAAATALSFRLA------NSFDEA-------------KSRSEEAA 391
           D     R +A   ++  A   LS+ +A        F+               K+  E  A
Sbjct: 354 DVSAHVRGLAQEHVNYTAHMHLSYFIAALLGRSEGFEPGDDTSAATSSGILPKTMEEINA 413

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSG 447
             R++ PI K      A + +   ME +GG GY+E      +IAR +R++   +I  G+ 
Sbjct: 414 LYRLLTPIAKAQTALSAISGLRSCMESLGGVGYLENEDPDLNIARLFRDANVLAIWEGTT 473

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           + M  D + ++++G +   ++ +  E  +G+S
Sbjct: 474 DVMADDFVRVVKRGKDGM-KILAVFEGWVGNS 504


>gi|75674835|ref|YP_317256.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74419705|gb|ABA03904.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 592

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 163/343 (47%), Gaps = 62/343 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGR 252
           LTE + G+D+ A+ S+ ++ SDG Y + G K F++     M+D  +  +LA++    +G 
Sbjct: 162 LTEPQAGSDVGALRSRAERASDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGT 221

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
            G   FL+P+ L D     G+ N +    +++K+G   + T  +   +     G+L+G+ 
Sbjct: 222 RGISLFLIPKFLVDADGSLGARNDIHASGIEHKLGIHGSPTCTMTMGDDGGAIGYLIGEE 281

Query: 303 NVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH------VSGGI-- 348
           N        M+ +   ++ A + V    V +AE     A+ YAR R        S G+  
Sbjct: 282 N------RGMRCMFTMMNQARLCVGLEGVGIAERASQQALAYARERRQGRAAGTSDGMSP 335

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKY 402
           +I  P +KR +  +    AAA A+ +  A S D A        R+  AA   ++ PI K 
Sbjct: 336 IIAHPDVKRMLMQMRALTAAARAICYATAVSLDMAARAADPDVRTAAAARGALLTPIAKA 395

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN------ 456
           +   +   V +  ++  GG G+IEE   A+HYR++   SI  G+     +D++       
Sbjct: 396 FSTDIGNEVASLGIQVHGGMGFIEETGAAQHYRDARITSIYEGTNGIQAIDLVTRKLAAD 455

Query: 457 -------LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
                  LL++ ++  +++ ++ +   G++G++    LRD++ 
Sbjct: 456 DGAAVSALLDELSDTVKRVEASNDPAFGTTGER----LRDALG 494


>gi|254296191|ref|ZP_04963648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157806275|gb|EDO83445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
          Length = 599

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 149 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 195

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 196 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 255

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+
Sbjct: 256 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 315

Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R     ++G    D+P         ++R +         A A ++  A  
Sbjct: 316 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 375

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 376 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 435

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 436 VRDARINMIYEGTNSVQALDLLG 458


>gi|103487022|ref|YP_616583.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977099|gb|ABF53250.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 600

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 54/381 (14%)

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAI 198
           Y MA  +A   M P +T A++ A++      +   + PK+ S E+  T            
Sbjct: 116 YRMAANQA-FAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGGT------------ 162

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA-------- 247
            + LTE   GTD+  I ++     DG Y ++G K F+SS    ++D  I L         
Sbjct: 163 -MNLTEPHCGTDLGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAP 221

Query: 248 -QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             V+G +  F+VP+ L  EDGS    N L    +++K+G  +N+T  + +    G+++G+
Sbjct: 222 DSVKG-ISLFIVPKFLVKEDGSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGE 280

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------L 349
            N     +  M     L   I  +    ++   A+ YA+ R     +            L
Sbjct: 281 ENKGLAAMFVMMNAARLGVGIQGLGQADIAFQNAVAYAQDRRQGRALTGPKDPQEKADPL 340

Query: 350 IDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
              P ++R + D    +          AL   LA+  +  + R        ++ P+ K +
Sbjct: 341 FVHPDVRRMLMDAKATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGY 400

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
                  V   A +  GG GYIEE  ++++ R++    I  G+     +D++   L + G
Sbjct: 401 GTDKGYEVATNAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNG 460

Query: 462 TNLFEQLFSTLEQDLGSSGKK 482
               + LF+ ++ +  ++  K
Sbjct: 461 GRAIQTLFAIVDAECAAAKDK 481


>gi|53718291|ref|YP_107277.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia pseudomallei K96243]
 gi|76810606|ref|YP_332270.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|126440782|ref|YP_001057732.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126452094|ref|YP_001064977.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|134279500|ref|ZP_01766212.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167718152|ref|ZP_02401388.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167737181|ref|ZP_02409955.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
 gi|167814314|ref|ZP_02445994.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167822790|ref|ZP_02454261.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|167844365|ref|ZP_02469873.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167892877|ref|ZP_02480279.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167901363|ref|ZP_02488568.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909593|ref|ZP_02496684.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167917608|ref|ZP_02504699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|217419388|ref|ZP_03450894.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|226196647|ref|ZP_03792227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810882|ref|YP_002895333.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|242316558|ref|ZP_04815574.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254187697|ref|ZP_04894209.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196771|ref|ZP_04903195.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254260436|ref|ZP_04951490.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|52208705|emb|CAH34641.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia pseudomallei K96243]
 gi|76580059|gb|ABA49534.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
 gi|126220275|gb|ABN83781.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|126225736|gb|ABN89276.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|134248700|gb|EBA48782.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|157935377|gb|EDO91047.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653514|gb|EDS86207.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|217396692|gb|EEC36708.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|225931178|gb|EEH27185.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505147|gb|ACQ97465.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|242139797|gb|EES26199.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254219125|gb|EET08509.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 595

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R     ++G    D+P         ++R +         A A ++  A  
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454


>gi|71906854|ref|YP_284441.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71846475|gb|AAZ45971.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 593

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 64/379 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ ALM   T      + P + S E+  T             + LTE   G+
Sbjct: 125 LCPMLTQGAIEALMIAGTDEQKAAYLPNLVSGEWTGT-------------MNLTEPSAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258
           D+AA+ S+ + + DG Y + G K F++     M+D  +  +LA+     EG  G   F+V
Sbjct: 172 DLAAVRSRAEPVGDGTYKVFGQKIFITYGEHDMTDNIVHLVLARTPNAPEGVKGISLFVV 231

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L   DG+P   N +    +++K+G   + T  L F +     G L+G+ N     +E
Sbjct: 232 PKFLLKADGTPGERNDVYCVSIEHKLGIHGSPTAVLAFGDNGGAIGTLVGEENRG---LE 288

Query: 311 DMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------HVSGGI---LIDQPVMKRA 358
            M I++      + + G+     +   A+ YA+ R       V GG    +I  P ++R 
Sbjct: 289 YMFIMMNAARFNVGLEGLGDAERAYQRAVVYAKERVQGTEVGVRGGPKVPIIKHPDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  +   I A  AL++  A + D A        R++  A+A ++ P+ K W  + A  + 
Sbjct: 349 LMSMRSRIEAMRALAYVTAAAQDNAHGNPDEVERTKAQAFADLLIPVVKGWSTESAIDIA 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL----- 464
           +  ++  GG GYIEE   A+H R++   +I  G+      D++      EKG  +     
Sbjct: 409 SLGVQVHGGMGYIEETGAAQHLRDARITAIYEGTTAIQANDLIGRKIAREKGVTIKSVIA 468

Query: 465 -FEQLFSTLEQDLGSSGKK 482
                 S L+ DL S G +
Sbjct: 469 EMRAAASQLDGDLASIGAR 487


>gi|192290813|ref|YP_001991418.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284562|gb|ACF00943.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 128 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL    LK K+G  ++ T  L F N     G LLG           M I++
Sbjct: 187 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----MIIMM 240

Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  ++     ++  RV L EA  YAR+R   G  L+   V++  + D+A  IAA+ A
Sbjct: 241 NFNSERLTMAAGCIAASRVCLDEATEYARQRFTFGKPLVKHQVIRHKLVDMAQKIAASQA 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA   D+ +S   E    +  A  T  +C        +EA++  GG+GY+    + 
Sbjct: 301 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 353

Query: 432 RHYRESPANSILLGSGNAM 450
           R YR+   N+I  G+   M
Sbjct: 354 RIYRDVKVNAIGGGTEEIM 372


>gi|91975284|ref|YP_567943.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91681740|gb|ABE38042.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 596

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE + GTD+  + ++  K +DG Y L+G K F+S+    ++D  I  +LA++EG   
Sbjct: 163 MNLTEPQCGTDLGLLRTKAVKQADGSYKLTGTKIFISAGEHDLADNIIHLVLARIEGAPA 222

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L +     G+ NG+    +++K+G   NAT  + + +  G+L+G+ N
Sbjct: 223 GIKGVSLFVVPKFLVNPDGSIGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEEN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354
                +  M     L  A+  ++   V+   A+ YAR     R +SG    D+P      
Sbjct: 283 KGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIV 342

Query: 355 ---MKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++RA+  I      A  +   TAL   +A+  D+AK R     +  +M P+ K    
Sbjct: 343 HPDVRRALLTIRSFNEAARALVMWTALKSDVAHRSDDAKERQTADDHLGLMTPVLKGVLT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +    A +  GG GYI    + +  R++    I  G+     LD++ 
Sbjct: 403 DVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|99078037|ref|YP_611295.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99035175|gb|ABF62033.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 570

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 26/301 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VE 250
           + LTE + G+D+ A++S+ +   DG Y +SG K ++S   +D       ++LA+    V 
Sbjct: 161 MNLTEPQAGSDVGALSSKAEDNGDGTYAVSGQKIYISWGDNDFTENVCHLVLARLPDGVP 220

Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+ L  E+G+P   N L    L++K+G   + T  +++    G+L+G  +
Sbjct: 221 GTKGISLFLVPKYLPDENGNPGKANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLVGKEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSG--GILIDQPVMK 356
                +  M     L      V     +   A+ YA  R      V G  G ++D   ++
Sbjct: 281 GGMAAMFTMMNNARLGVGGQGVGVAEGAYQHALAYALDRKQGKTPVEGGTGTIVDHADVR 340

Query: 357 RAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           R + ++  D+ AA A+    A + D   A   +E    A  + PI K +  +    V  +
Sbjct: 341 RMLMEMKADVYAARAIMLACAGAIDMGTATGDAEWKTRAAFLTPIAKAFGTETGIRVAEQ 400

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLE 473
            ++  GG G+IEE   A+ YR+    +I  G+     +D V   +  G  +  +L   +E
Sbjct: 401 GVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDLVARKMMDGGEMAHRLIDEIE 460

Query: 474 Q 474
           +
Sbjct: 461 E 461


>gi|163743962|ref|ZP_02151332.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161382807|gb|EDQ07206.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 593

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 70/414 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K 
Sbjct: 148 YLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKI 194

Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F+SS    M+D  I  +LA++ G       V  F+VP+ +  EDGS    NG+   +++ 
Sbjct: 195 FISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKEDGSLGDRNGVSVGKIEE 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   N+T  + + +  G+LLG  +     +  M     L   +  ++    +   A+ 
Sbjct: 255 KMGIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALE 314

Query: 338 YARRR----HVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA+ R     V+G          LI  P ++R + D       A A     A   D+A  
Sbjct: 315 YAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGAKMIDQAHR 374

Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++ A   I  + P+ K +       +  +A +  GG GYIEE  ++++ R++    I 
Sbjct: 375 AEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEEWGMSQYTRDARIAMIY 434

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     LD++                L QD    GK V+       + CKE+  ++  
Sbjct: 435 EGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMVKNFCKENGDISES 478

Query: 504 LTEKI--ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            +++    L +++  L  AGM      F++N   +  ++    L G ++  H+ 
Sbjct: 479 YSKEFIEPLKAASKDLQAAGM-----YFMQNGMTNPNNA----LSGSYDFMHMF 523


>gi|171463914|ref|YP_001798027.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193452|gb|ACB44413.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 595

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 182/375 (48%), Gaps = 65/375 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +P + + + PK+ S E+  T             + LTE + G+
Sbjct: 126 LCPLLTDGAIEALLTAASPALQEQYVPKMISGEWTGT-------------MNLTEPQAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++ + S+     DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 173 DLSMVCSRAVPEGDGTYKIFGTKIFITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G  N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 233 PKFLVNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRG---LE 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKR 357
            M   + +++A  +V    +++AE     A+ YA+ R  S  +        +I QP +KR
Sbjct: 290 YM--FVMMNAARFAVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKR 347

Query: 358 AIADIALDIAAATALSFRLANSF-------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            +  +   I A+ AL++  A+++       DEA  ++ +A Y   + PI K +  +M+  
Sbjct: 348 MLMTMRAYIEASRALAYYAASAYDAQHAAPDEAVRKANQAVY-EFLVPIVKGFSTEMSID 406

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468
           V +  ++  GG G+IEE   A+HYR++   +I  G+      D++    +  G  + ++L
Sbjct: 407 VASLGVQVHGGMGFIEETGAAQHYRDARILTIYEGTTAIQANDLIGRKTVRDGGAIAKEL 466

Query: 469 ---FSTLEQDLGSSG 480
               +  E+DL +SG
Sbjct: 467 SQRIAATEKDLAASG 481


>gi|149204214|ref|ZP_01881182.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149142656|gb|EDM30701.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 572

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 37/286 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VE 250
           + LTE + G+D+ A+ S+ + + DG Y ++G K ++S   +D       ++LA+    V 
Sbjct: 161 MNLTEPQAGSDVGALRSKAEPMGDGTYAVTGQKIYISWGDNDFTENVCHLVLARLPDGVP 220

Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+ +  E+G+P   N L    L++K+G   + T  +++    G+L+G+ +
Sbjct: 221 GTKGISLFLVPKFIPDENGAPGKQNSLKVVSLEHKMGLHGSPTAVMQYDGAIGWLVGEAH 280

Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI--LI 350
                 + M+ +   +++A + V G  + +AE     A+ YA  R      V GG   +I
Sbjct: 281 ------DGMRAMFTMMNNARLGVGGQGIGVAEGAYQHALAYAMDRKQGRTPVQGGSGSII 334

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMA 408
           +   ++R +A +  DI AA A++   A + D   A  +   AA A  + PI K +     
Sbjct: 335 EHADVRRMLATMKADIFAARAIALACAQAIDMQTATDKPHWAARAAFLTPIAKAFGTDTG 394

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            AV    ++  GG G+IEE   A++ R+    +I  G+     +D+
Sbjct: 395 IAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDL 440


>gi|254486755|ref|ZP_05099960.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214043624|gb|EEB84262.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 593

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   GTD+  + ++     DG Y ++G K F+SS   D       ++LA++EG   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQGDGSYKITGQKIFISSGEHDMAANIIHLVLAKIEGGPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    NG+    ++ K+G   N+T  + +    G+LLGD +
Sbjct: 221 GIKGVSLFIVPKFIVKEDGSLGDRNGVAVGSIEEKMGIHGNSTCVMNYDGATGYLLGDEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG--------ILID 351
                +  M     +   +  ++   V+   A+ YA+ R     V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARIGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGAENPNGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMA 408
            P ++R++ D    +  A A     AN  D A  RSE+        +M P+ K +   + 
Sbjct: 341 HPDIRRSLMDQKSFVEGARAFILWGANLID-AAHRSEDKDADGLVSLMTPVIKGFLTDVG 399

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +  +A +  GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 400 YDMTVKAQQIYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447


>gi|56698615|ref|YP_168992.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56680352|gb|AAV97018.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 588

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 146/322 (45%), Gaps = 47/322 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE + G+D++ +        DG Y +SG K F++    D       ++LA+     E
Sbjct: 161 MNLTEPQAGSDLSRVRCTAVPQDDGTYAISGTKIFITFGEHDLSENIVHLVLARTPDAPE 220

Query: 251 GRVGC--FLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP+LL     E    N L    L++K+G R++ T  +E+ N  G+L+G+ N
Sbjct: 221 GVRGLSLFVVPKLLAGEGGETSQRNTLGCVSLEHKLGVRASPTAVMEYDNATGYLVGEEN 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQPV 354
                     + I + SA  +V    V++AE     A+ YAR     R V G      P+
Sbjct: 281 SGL-----RYMFIMMTSARYAVGVQGVAIAERAYQHALSYARDRIQSRPVDGSAQDAVPI 335

Query: 355 MK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           ++           RA+ +    +A AT     LA    E ++R+E  + A  + P+ K +
Sbjct: 336 IQHPDVRRMLLRMRALTEGGRALAIATGGWLDLAEHGPE-EARAEAQSMAEFLVPLVKGF 394

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
           C + A  V +  ++  GG G+IEE  +A+ YR++    I  G+      D+L   +L  G
Sbjct: 395 CTERAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLGRKVLRDG 454

Query: 462 TNL---FEQLFSTLEQDLGSSG 480
                 F ++ +  E +L   G
Sbjct: 455 GRTARRFAEMIAATEGELSKGG 476


>gi|94499983|ref|ZP_01306518.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65]
 gi|94427841|gb|EAT12816.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65]
          Length = 589

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 154/354 (43%), Gaps = 46/354 (12%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  ++ AL       +   + P++ S E+  T             + LTE + GT
Sbjct: 127 MYPGLSHGAIDALTEHAEQELKDKYLPQLISGEWTGT-------------MCLTEPQCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++ +  +DG Y +SG K +++    D       ++LA++ G       +  FLV
Sbjct: 174 DLGLIRTKAEPQADGSYNISGTKIWITGGEHDMVDNIVHLVLAKLPGAPDSSKGISLFLV 233

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----KI 314
           P+ LEDGS N      L++K+G + +AT  + F    G+L+G  N     +  M    +I
Sbjct: 234 PKFLEDGSRNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLIGKENEGLKCMFTMMNAARI 293

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIADIALDI 366
           ++ +    ++    ++SL  A    + R ++G          +I  P ++R +    + +
Sbjct: 294 MVGVQGLGLAEKAYQISLGFAKERLQSRSLTGPKSPDEKADPIIVHPDVRRMLMQQKVFL 353

Query: 367 AAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             A  +++       LA+  D+   R E     +IM PI K +          +A++ +G
Sbjct: 354 EGARCMAYFTGYHLDLAHKHDDESVREESDDIVQIMTPIIKAYLTDEGFFSTDQALQSMG 413

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
           GSG+ ++  + +  R+     I  G+     LD+    L  KG  L +  F  +
Sbjct: 414 GSGFTQDWEVEQLLRDGRIARIYEGTNGIQALDLTGRKLTIKGGRLPKTFFKVM 467


>gi|259416521|ref|ZP_05740441.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259347960|gb|EEW59737.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 593

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 165/398 (41%), Gaps = 66/398 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264
            +   DG Y ++G K F+S+    MS+  I  +LA++ G       V  F+VP+ +   D
Sbjct: 179 AEPQDDGSYKITGQKIFISAGDHDMSENVIHLVLAKIPGGPEGIKGVSLFIVPKFIVNAD 238

Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+P   NG+   +++ K+G   N+T  + +    G+LLGD++     +  M     L   
Sbjct: 239 GTPGERNGVSVGKIEEKMGIHGNSTCVMNYDAATGWLLGDMHKGMRAMFTMMNEARLGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAA 369
           +  ++    +   A+ YA+     R V+G          LI  P ++R + D       A
Sbjct: 299 MQGLAQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D+A    ++ A   I  + P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFILWGATMIDKAHRSEDKDADGLISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             ++++ R++    I  G+     LD++                L QD    GK V+   
Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462

Query: 488 RDSISLCKEDKGL----ARFLTEKIALAS---SAAALY 518
                 CKE+  +    A+   E +  AS    AA +Y
Sbjct: 463 DLVKGFCKENAEISDSYAKDFIEPLKAASKDLQAAGMY 500


>gi|319760887|ref|YP_004124824.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822791|ref|YP_004386094.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|317115448|gb|ADU97936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308163|gb|AEB82578.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 385

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 17/274 (6%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PM 239
           RE+ P     M    V   L +TE   G+D+ AI +  + + DG + ++G K F+++   
Sbjct: 117 REFLPK----MASGEVVGSLAMTEPGAGSDLKAIRTTAKAV-DGGFEITGQKTFITNGAH 171

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
           +D  I+ A+     G   +     D    G    R+ +KIG  +  T EL F   F    
Sbjct: 172 ADRVIVFAKTSPEAGARGISLFWVDTKTPGFAVGRVLDKIGQLAQDTAELFFDKVFVPRD 231

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+LN   G      +   L  A+     + V+L   I Y ++R   G  LID   ++
Sbjct: 232 ALIGELNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIDYVKQRQAFGHALIDNQYIR 291

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +ADI    AA  A        + + +  ++ AA A       K W  + A   I + M
Sbjct: 292 FRLADIKTHAAATRAFVDSCLAQYLQGQLTADGAAMA-------KLWASE-ATRAIDDLM 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG+GY+ E  IAR Y +   N I  GS   M
Sbjct: 344 QFFGGNGYMREYPIARAYADVRPNRIYGGSSEIM 377


>gi|146324137|ref|XP_753642.2| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|129558050|gb|EAL91604.2| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159126625|gb|EDP51741.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 647

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 210/507 (41%), Gaps = 77/507 (15%)

Query: 35  NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y++D+ L  L++ + PS  ++ ++     LGE  +S   +E +  A  + P +  Y  
Sbjct: 26  NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQPYVKGYNV 85

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L R     G+    +D S+    R   + +     YL     
Sbjct: 86  WGQRYDYDRLVTSEGWKQLSRWGARHGVVALGYDPSYGASRRLVQYTVN----YLYG--P 139

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPK------IFSREYDPTNKAPMQKTSVAIGLG 201
           +  L S  V      AL+ + ++ +   P+      +F+R    T++     TS   G  
Sbjct: 140 SSGLTSCPVAMTDGAALILSQQLQQHAFPEDHPFRVVFNRL---TSRNEDFWTS---GQW 193

Query: 202 LTEKRGGTDIAAITSQGQ----------------------KISDGIYCLSGHKWFLSSPM 239
           +TE+ GG+D+    +                          + +G Y +SG K+F S+  
Sbjct: 194 MTERAGGSDVQNTETWATHDPVPASSTASNNNITNNNPLGTLGEGEYSISGFKFFSSATD 253

Query: 240 SDAFIMLAQV--EGRVGCFLVPRLLEDGSPN--------GLCYQRLKNKIGNRSNATVEL 289
           ++  ++LA+    G++  FL P       PN        G+   RLKNK+G +   T EL
Sbjct: 254 ANVTLLLAKTAPSGKLSTFLAPLRRTITGPNQAPREVTNGVRIHRLKNKLGTKELPTAEL 313

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E  +    L+G  +     +  +  +    + I S+   R +L+ A  ++R R   G  L
Sbjct: 314 ELRDMRAHLVGPRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARAFSRARSTVGEPL 373

Query: 350 IDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKS-------RSEEAAYARI 395
              P+  R +A++ +   AA  L F        + N  D   +        ++     R 
Sbjct: 374 WLIPMHLRLLAEVEVRQRAAMQLGFFTVAVMGVVENPGDPGAAVPAHVPNGADATVVFRA 433

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAM 450
           +  ++K    KMA   I E  E +GG GY++E      +++R  R +  NSI  G+ N +
Sbjct: 434 LTAVSKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTNVL 493

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             +++  L    N F    + +E+ LG
Sbjct: 494 ASEMVRFLLAREN-FAVFAAWVERVLG 519


>gi|300313303|ref|YP_003777395.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300076088|gb|ADJ65487.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 591

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 54/342 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252
           LTE + G+D+  + ++     DG Y LSG K F+S    D       ++LA++     G 
Sbjct: 166 LTEAQAGSDLGQLRTRAVPQDDGSYRLSGDKIFISGGEHDLTPNIVHLVLARLPDAPAGS 225

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G   FL PR+L+DGS NG+    +++K+G   +AT  L F     +L+G+         
Sbjct: 226 KGLSLFLAPRVLDDGSRNGVHCTGIEHKMGIHGSATCSLHFEQAQAWLVGEAGRGLA--- 282

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVS-------GGILIDQPVMKRA 358
              + + +++A + V    + LAEA +     YAR R  S         +++  P +++ 
Sbjct: 283 --AMFVMMNAARLHVGAQGLGLAEAAYQRASAYARERRQSRAPGSSGNDLIVHHPAVQKL 340

Query: 359 IADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           + +    I  A  L+        LA    EA  RS        + P+ K +         
Sbjct: 341 LMEQRCRIEGARLLTCWAGLLLDLAEHDPEAALRSRHHERLEFITPVIKAFLTDQGFQCA 400

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           + A++  GG GY+ E  I +  R++                 + ++ +GTN  + +   +
Sbjct: 401 SRALQVFGGHGYVVETGIEQFMRDA----------------RITMIYEGTNEIQAIDFLM 444

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
            + LG  G++    L D + L + D   A  L E+  L   A
Sbjct: 445 RKVLGDEGRR----LDDFLGLVRADIAEASGLGEQARLLGEA 482


>gi|85703464|ref|ZP_01034568.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85672392|gb|EAQ27249.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 600

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 50/310 (16%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ S+ +  +DG Y ++G K ++
Sbjct: 178 PKLVSGEWSGT-------------MNLTEPQAGSDVGALRSKAEADADGTYAITGQKIYI 224

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA+    V+G  G   FLVP+ + D     G  N L    L++K+
Sbjct: 225 SWGDNDFTENVCHLVLARLPDGVQGTKGISLFLVPKFIPDESGNPGKQNSLKVVSLEHKM 284

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE---- 334
           G   + T  +++    G+L+G       P + M+ +   +++A + V G  + +AE    
Sbjct: 285 GLHGSPTAVMQYDRATGWLVGK------PHDGMRAMFTMMNNARLGVGGQGIGVAEGAYQ 338

Query: 335 -AIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
            A+ YA  R           G +I+   ++R +A +  DI AA A++   A + D   S 
Sbjct: 339 HALAYAMDRKQGRTPSEAGTGSIIEHADVRRMLATMKADIFAARAIALACAQAIDMQTST 398

Query: 386 -RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++  ++ A  + PI K +      A+    ++  GG G+IEE   A++YR+    +I  
Sbjct: 399 GKAHWSSRAAFLTPIAKAFGTDTGIAMAEMGVQVHGGMGFIEETGAAQYYRDVRVTAIYE 458

Query: 445 GSGNAMVLDV 454
           G+     +D+
Sbjct: 459 GTNGIQAMDL 468


>gi|84502508|ref|ZP_01000644.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389320|gb|EAQ02117.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 594

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 46/382 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM 245
           +PM +      + L+E + G+ ++ IT+Q ++  DG Y +SG K ++S     +S+  I 
Sbjct: 149 SPMLEGRFLGTMCLSEPQAGSSLSDITTQARRREDGTYSISGRKMWISCGDHNISENIIH 208

Query: 246 LA---------QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF 291
           L           V+G +  F+VP+   D     G  N +    L +K+G ++     L F
Sbjct: 209 LVLAKLPDSPPGVKG-ISLFVVPKYRVDADGQIGVQNDVALAGLNHKMGYKATTNCALNF 267

Query: 292 S---NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
               +  G+L+G     L      + + +I + + +  +   G + SLA A    + RH 
Sbjct: 268 GENGDCIGYLIGKEHQGLRYMFQMMNEARIAVGVGATALGQCGFQASLAYARERPQGRHP 327

Query: 345 SGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------ 391
                     +L D   ++R +      +  A AL    A+  D A S SEE        
Sbjct: 328 DNKDATKPQVLLTDHADIRRLLLAQKAAVEGALALCLYCASLVDLAASTSEEDERHEAEL 387

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ PITK W  +        A++ +GG+GY  +  I R YR++  N I  G+     
Sbjct: 388 LLEMLTPITKSWPSEFCLEANKHALQVLGGAGYTRDYPIERCYRDNRLNPIHEGTHGIQG 447

Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           LD L   +L + +   + L   +  D+ ++ + V   L +S+     D+ L RF     +
Sbjct: 448 LDFLGRKVLMQDSAGVKLLVERIRTDMAAANRTVSPDLIESL-----DEALERFEVVTRS 502

Query: 510 LASSAAALYRAGMNDIADVFLE 531
           L    A   RAG+ + A +FL+
Sbjct: 503 LTEEVARDRRAGLAN-ATLFLD 523


>gi|330818283|ref|YP_004361988.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
 gi|327370676|gb|AEA62032.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
          Length = 595

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ + I+ G Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPITGGAYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMAKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNATGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    ++P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454


>gi|146340423|ref|YP_001205471.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146193229|emb|CAL77244.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 569

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 46/382 (12%)

Query: 149 GHLMSPSVTSASMVALMTTPR-VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G L  P  ++  ++   TT   +  +W PK+ + E+  T             + ++E   
Sbjct: 128 GMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIAGEWGAT-------------ICISEVGA 174

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPR 260
           G+D++ I ++     DG + ++G K ++S    D        +LA+ EG  G   FLVP 
Sbjct: 175 GSDVSRIRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPD 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + DG+ NG+  ++L++K+G   + T  + F +  G LLG+           ++ + + +
Sbjct: 235 RI-DGAANGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLA-----QMFVMITN 288

Query: 321 AIMSVSGMRVSLAEAIHYAR----RRHVSGGI------LIDQPVMKRAIADIALDIAAAT 370
             M+V  M + +A A         R+ + GG       +I    ++R +  +  D+  A 
Sbjct: 289 MRMAVGAMGLGIASAAADVALAYARQRLQGGAGPQPLPIIVHADVQRTLLSMQADVECAR 348

Query: 371 ALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL +  A   D A+      +R + AA A+ + PI K    ++A A    A++ +GG+GY
Sbjct: 349 ALIYAAAVEADLARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQVLGGAGY 408

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK 482
             +  + +  R+S    I  G+     LD+L+  L + G        S    D+    ++
Sbjct: 409 TTDWPVEQLLRDSRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAER 468

Query: 483 VITILRDSISLCKEDKG-LARF 503
            +    + I L +   G LAR 
Sbjct: 469 DVAAATEIIDLLETTAGQLARM 490


>gi|158522175|ref|YP_001530045.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511001|gb|ABW67968.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 605

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 143/344 (41%), Gaps = 52/344 (15%)

Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  +A M+  + T    K +   +++ ++  T             + LTE   G
Sbjct: 124 MMYPGLTHGAAKMIESLGTEEQKKIYVKNMYTGKWAGT-------------MLLTEPDAG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+ A+T+  +K  DG Y ++G+K F+S+    M++  I  +LA++EG       +  F+
Sbjct: 171 TDVGALTTTAKKNDDGTYSITGNKIFISAGEHDMTENIIHPVLARIEGAPAGTRGISLFI 230

Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPV 309
           VP  R+  DGS    N +    ++ K+G   NAT  L      N  G LLG  N     +
Sbjct: 231 VPKYRVNPDGSLGEFNDVVCTGIEEKMGIHGNATCSLTLGGKGNCIGTLLGQENKGMKAM 290

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------IDQPVMKR 357
             M         +   S    S A A+ YA+ R     +L            I  P ++R
Sbjct: 291 FLMMNEARFGVGVQGFSLGATSFANAVAYAKERIQGRELLKFMDADAPSVNIIKHPDVRR 350

Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +  +   +    AL + +A  FD      E+  + +  A    + P+ K +C      V
Sbjct: 351 QLLVMKSYVEGMRALLYYVARCFDMERVLEESDEKEKYKALIEFLIPVVKAYCTDKGFEV 410

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
               M+  GG GYI E    +  R+    SI  G+     +D+L
Sbjct: 411 CVLGMQVYGGYGYIAEYPQEQLVRDCKITSIYEGTNGVQAMDLL 454


>gi|27376092|ref|NP_767621.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349231|dbj|BAC46246.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 409

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 164/372 (44%), Gaps = 40/372 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P   AL R++   GL    +   +  +   Q  KI A++   +AQ  A
Sbjct: 58  PFAHEWDEAGEFP--RALYRKAAEIGLLGLGFPEEYGGIAADQFMKIVASQE--LAQAGA 113

Query: 149 G----HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           G     LMS ++ S   +A    P V     P++ + E          K S    L +TE
Sbjct: 114 GGVSASLMSHTIGSPP-IARAARPEVKARVLPQVLAGE----------KISA---LAITE 159

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             GG+D+A + ++ ++  D  Y +SG K F++S M   ++ +A   G  G   V  LL  
Sbjct: 160 PGGGSDVANLRTRARRDGDH-YVVSGEKTFITSGMRADYLTVAVRTGGEGAGGVSLLLIA 218

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
           G   GL   +LK K+G  ++ T  L F +     +   N+     +  KI++   +S  M
Sbjct: 219 GDTPGLSRTKLK-KMGWWASDTATLHFDDC---RVPAENLIGEEGQGFKIIMQNFNSERM 274

Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++       RV L EAI YA+ R   G  L    V++  I D+A  +AA+ A+   LA 
Sbjct: 275 GMAAGCTAFARVCLDEAIAYAKERKTFGKPLAQHQVIRHKIVDMAQKVAASQAMLEMLAW 334

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ +S   E    +  A  T  +C        +EA++  GG+G++      R YRE  
Sbjct: 335 RLEQGESPVAEICMMKNQATQTMAFCA-------SEAVQIFGGAGFMRGIKAERIYREVK 387

Query: 439 ANSILLGSGNAM 450
            N+I  G+   M
Sbjct: 388 VNAIGGGTEEIM 399


>gi|119898785|ref|YP_933998.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119671198|emb|CAL95111.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 595

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 182/418 (43%), Gaps = 75/418 (17%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V  A  + +  T    + W  K+ S E+  T             + LTE + G+D+AA 
Sbjct: 130 NVGQAEALLIAATDEQKQTWLHKVVSGEWGST-------------MNLTEPQAGSDLAAT 176

Query: 215 TSQGQKISDGIYCLSGHKWFLS------SPMSDAFIML------AQVEGRVGCFLVPRLL 262
            ++ +  +DG Y L G K F+S      +P     ++       A V+G +  F+VP+ L
Sbjct: 177 RARAEPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKG-LSLFIVPKYL 235

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
            +     G  N +    +++K+G   + T  + + +     G+L+G  N     +E M  
Sbjct: 236 VNADGSLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRG---LETM-- 290

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRR--------HVSGGILIDQPVMKRAIAD 361
            I ++ A   V      LAE     A+ YAR R          +G  ++  P +KR +  
Sbjct: 291 FIMMNEARFGVGVQGAGLAERAYQFALGYARDRVQGRDAVSGEAGKPILHHPDVKRMLLG 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           +   + A  AL +  A  FD A   +++A       Y  ++ P+ K W  ++   V  EA
Sbjct: 351 MRARVMAMRALLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWSTEVGNDVCDEA 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ++  GG G++EE  IA+ +R++   +I  G+      D++     G  +  +  +TL   
Sbjct: 411 IQVFGGMGFVEETGIAQFFRDARIITIYEGTTGIQANDLI-----GRKILRENGATL--- 462

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARF---LTEKI-ALASSAAALYRAGMNDIADVF 529
                +++I  L  ++   +ED+ LA       E I AL ++A  +   G + +ADV 
Sbjct: 463 -----RELIADLSATVLALREDEQLADIADAFAETIDALETAADWVLANGKDRLADVL 515


>gi|146343493|ref|YP_001208541.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196299|emb|CAL80326.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 596

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 139/319 (43%), Gaps = 47/319 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K + PK+ + E+  T             + LTE   GTD+  + ++  + +DG + +SG 
Sbjct: 148 KTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFKISGT 194

Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       ++LA++EG       +  F+VP+ + +     G+ NG+    +
Sbjct: 195 KIFISAGEHDLADNIIHLVLARIEGAPAGIKGISLFVVPKFMVNADGTLGARNGVMCGSI 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   N+T  + + N  G+L+G+ N     +  M     L  A+  ++   V+   A
Sbjct: 255 EHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNA 314

Query: 336 IHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLA 377
             YAR R     ++G    D+P              +  RA  + A  +   T+L   +A
Sbjct: 315 AAYARERIQGRSLTGAKATDKPADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLKSDVA 374

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   + K R     +  +M P+ K +   M  A   +A +  GG GYI E  + +  R++
Sbjct: 375 HRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVQAQQMYGGHGYIAEWGMEQFVRDA 434

Query: 438 PANSILLGSGNAMVLDVLN 456
               I  G+     LD++ 
Sbjct: 435 RIAMIYEGANGIQALDLVG 453


>gi|254454294|ref|ZP_05067731.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198268700|gb|EDY92970.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 591

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 184/438 (42%), Gaps = 74/438 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+ + E+  T             + LTE   GT
Sbjct: 124 MYPGLTHGNISAIVTHGTDAQKAMYLPKMATGEWSGT-------------MNLTEPHCGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFLV 258
           D+  + ++     DG Y +SG K ++S+    +SD  I  +LA++ G       +  F+V
Sbjct: 171 DLGLMRTKAVPQDDGTYKISGQKIWISAGEHDLSDNIIHLVLAKIPGGPDGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  EDGS    N L    L+ K+G   NAT  + +    G+L+G+++     +  M 
Sbjct: 231 PKFMVHEDGSLGERNALSCGGLEEKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV--------MKRAIAD 361
               L   +   +   V+   A+ +AR     R V+G    D+P         ++R + D
Sbjct: 291 NEARLGVGLQGYAQGAVAYENALGFARDRLQGRAVTGVEAPDKPADPIIVHPDVRRNLMD 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECI 419
               +  A AL++  A   D +    +E A A I  M P+ K +           A + +
Sbjct: 351 QKSFVEGARALTYWGATLMDRSHKNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTL 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GGSG+ +E  + +  R++    I  G+     LD++                  + LG +
Sbjct: 411 GGSGFTQEWGLEQFVRDARITMIYEGTNGIQALDLVG-----------------RKLGLN 453

Query: 480 GKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDN 537
           G K +    + I +   ++KG A F  + +  L  ++  L  AGM           F+ N
Sbjct: 454 GGKTVMAFFEIIKTYIADNKGDAAFEADFLEPLKEASKDLQAAGM----------YFMQN 503

Query: 538 CHSTHCMLHGRFNAAHII 555
             + +  L G ++  H++
Sbjct: 504 MKNPNDALSGSYDFMHMM 521


>gi|163745780|ref|ZP_02153139.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex
           HEL-45]
 gi|161380525|gb|EDQ04935.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex
           HEL-45]
          Length = 593

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 43/329 (13%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--ED 264
                DG Y +SG K F+SS    M+D  I  +LA++EG       V  F+VP+ +  ED
Sbjct: 179 AVPQDDGSYKISGQKIFISSGEHDMADNIIHLVLAKIEGGPEGIKGVSLFIVPKFMVKED 238

Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           GS    NG+    ++ K+G   N+T  + +    G+LLG  +     +  M     +   
Sbjct: 239 GSLGERNGVSVGSIEEKMGIHGNSTCVMNYDGATGYLLGTEHKGMRAMFTMMNEARVGVG 298

Query: 322 IMSVSGMRVSLAEAIHYA----RRRHVSGGI--------LIDQPVMKRAIADIALDIAAA 369
           +  ++   V+   A+ YA    + R V+G +        LI  P ++R++ D    + AA
Sbjct: 299 MQGLAQAEVAYQNAVIYANDRLQGRAVTGAVAPEKAADPLIVHPDIRRSLMDQKSFVEAA 358

Query: 370 TALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D A    ++ A     ++ P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFILWGATMIDAAHRADDKDADGLVSLLTPVIKGFLTDQGYDMTVKAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
             +++  R++    I  G+     LD++ 
Sbjct: 419 WGMSQFTRDARIAQIYEGANGVQALDLVG 447


>gi|312884108|ref|ZP_07743820.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368156|gb|EFP95696.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 384

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           M+    +  + + + PK+ + E+                LG   LTE   G+D AA+T+ 
Sbjct: 96  MIGSFGSEEIKQQYCPKLITAEW----------------LGSYCLTEPNAGSDAAALTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K++D  Y L+G K F+S    +D  +++A+  G  G   V   +   + NG+ Y R +
Sbjct: 140 A-KLTDEGYVLNGSKVFISGAGDTDVLVVMART-GEPGAKGVSAFVVPANANGISYGRRE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G +  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRSITFDNVLVEKSNLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQHA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  + D   ++  +AD+A ++ AA  +    A+  D   ++     
Sbjct: 256 LEQATQYMQERKQFGKPIADFQALQFKLADMATELVAARQMVRLAASKLDNGDTQ----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V  +A++  GG GYI E  + RH+R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDIGFKVCDQALQIHGGYGYIREYPLERHFRDVRVHQILEGTNEIMR 369

Query: 452 LDVL-NLLEKGTNLF 465
           L +   LL  G  +F
Sbjct: 370 LIIARRLLTDGLQIF 384


>gi|330895556|gb|EGH27866.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 190

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 7/183 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQPP   G N Y  D  L    + F +      ++  G  +          +AN + P+ 
Sbjct: 14  NQPPPLDGANLYRIDVPLQDWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANRHKPEF 72

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++   G R D VEFHPA+H L+  +I  G+    W        +  AH  RAA  YL  
Sbjct: 73  ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHT 127

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TE
Sbjct: 128 QADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187

Query: 205 KRG 207
           K+G
Sbjct: 188 KQG 190


>gi|299067968|emb|CBJ39182.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CMR15]
          Length = 595

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 51/342 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T  + + + PK+ S E+  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257
           D+  + ++ + ++DG Y ++G K F+S+    +SD  I L         A  +G +  F+
Sbjct: 174 DLGILRTKAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKG-ISLFV 232

Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N     +  M
Sbjct: 233 VPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVM 292

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------V 354
                L   +  +    V+   +  YA+ R     +SG    D+P              +
Sbjct: 293 MNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLL 352

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +RA A+     A   AL      S  +   R E A    ++ P+ K +    A     E
Sbjct: 353 TQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNE 412

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            M+  GG GYI E  + ++ R++  N I  G+     LD+L 
Sbjct: 413 GMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG 454


>gi|315499620|ref|YP_004088423.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417632|gb|ADU14272.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 594

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 63/385 (16%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAP 190
           H +  A   ++    +   M P +T  ++ AL    T  +   + PK+ + E+  T    
Sbjct: 106 HVVATAYSEMLTGASSAFAMYPGLTDGAVAALSVGGTDELKALYLPKLIAGEWSGT---- 161

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIM 245
                    + LTE   GTD+  + S+    SDG Y +SG K ++S+   D       ++
Sbjct: 162 ---------MNLTEPHCGTDLGLLRSKAVPDSDGTYKISGQKIWISAGEHDFTGNICHLV 212

Query: 246 LAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNT 294
           LA++EG       +  FLVP+ + D  G+P   N L    L++K+G   N+T  + + + 
Sbjct: 213 LARIEGAPAGVKGISLFLVPKFIPDANGNPGERNSLHCAGLEHKMGIHGNSTCVMIYEDA 272

Query: 295 FGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAEAIHYA---------RRRHV 344
            G+LLG+ +      E +KI+ Y+ ++A + V    +++  A H A         + R +
Sbjct: 273 KGWLLGNAH------EGLKIMFYMMNNARLGVGLQGLAIGHASHVAAVEFAKDRLQGRAL 326

Query: 345 SGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +G    D+P              +  RA+ +         AL   LA   ++  +R +  
Sbjct: 327 TGPKSPDKPADSILVHPDVRRMLLESRALLEGGRGFLTWVALQADLAKYAEDEATREKAN 386

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +  ++ P+ K +  +    V  ++M+  GGSG+ E    +++ R+     I  G+    
Sbjct: 387 DFLSLLTPVVKAYLTEKGLKVTQDSMQVHGGSGFTEHFPASQYMRDIRITLIYEGTNGVQ 446

Query: 451 VLDVLN--LLEKGTNLFEQLFSTLE 473
            LD++   L  KG       F+ ++
Sbjct: 447 ALDLVGRKLPSKGGRAVMAYFAEID 471


>gi|83952431|ref|ZP_00961162.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83836104|gb|EAP75402.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 569

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 50/336 (14%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +SP +T   + AL    +  + + + PK+ S ++  T             + LTE   G+
Sbjct: 124 LSPLMTQGQIEALEHHASDEIKEVYLPKLVSGDWAGT-------------MNLTEAHAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+ A+ ++ +   DG Y ++G K F+S   +D       ++LA++ G       +  F+V
Sbjct: 171 DVGALRTKAEPQGDGSYAVTGQKIFISWGDNDITENVCHLVLARLPGAPEGTKGISLFMV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D     G  N L    L++K+G   + T  ++F    G+L+G+     G ++ M 
Sbjct: 231 PKYIPDEAGNPGQANDLRVVSLEHKLGLHGSPTAVMQFDGARGWLIGE---EGGGMKAM- 286

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSG------GILIDQPVMKRAIADI 362
               +++A + V G  + +AEA     + YA  R V G        +I    ++R +A++
Sbjct: 287 -FTMMNNARLGVGGQGIGVAEAACQTALAYAEER-VQGRSAGPEKAIIGHADVRRMLAEM 344

Query: 363 ALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             D  AA +++   A + D   A   ++ AA A  + PI K +  +    V    ++  G
Sbjct: 345 RADTFAARSIALACAVAIDMAHATGGADWAARAAFLTPIAKAFGTETGMRVAELGVQVHG 404

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G G+IEE   A++ R+    +I  G+     +D++ 
Sbjct: 405 GMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDLVG 440


>gi|86751704|ref|YP_488200.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574732|gb|ABD09289.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 596

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + GTD+  + ++  K +DG Y ++G K F+S+   D       ++LA++EG   
Sbjct: 163 MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPA 222

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP++L +     G+ NG+    +++K+G   NAT  + + +  G+L+G+ N
Sbjct: 223 GIKGVSLFVVPKILVNADGSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEEN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP------ 353
                +  M     L  A+  ++   V+   A+ YAR     R +SG    D+P      
Sbjct: 283 KGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIV 342

Query: 354 --------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
                   +  RA  + A  +   TAL   +A+  D+AK R     +  +M P+ K    
Sbjct: 343 HPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGVLT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +    A +  GG GYI    + +  R++    I  G+     LD++ 
Sbjct: 403 DVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|34499271|ref|NP_903486.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105122|gb|AAQ61478.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 593

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 139/303 (45%), Gaps = 37/303 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIM 245
           PM  +    G + LTE + G+D+A + ++    +DG Y +SG K F++     M++  + 
Sbjct: 149 PMMASGQWTGTMNLTEPQAGSDLAQVRTKAAPAADGSYRVSGQKIFITWGEHDMAENIVH 208

Query: 246 L---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF 291
           L         A V+G +  F+VP+ L +     G+ N +    L++K+G   + T  + F
Sbjct: 209 LVLARLPDAPAGVKG-ISLFIVPKFLVNADGSLGARNDVRCVSLEHKLGIHGSPTAVMSF 267

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--- 345
            +     G+L+G+ N     +  M     L   I  V+    +  +A+ YAR R  S   
Sbjct: 268 GDNDGAVGYLVGEPNKGLNYMFTMMNHARLGVGIEGVAVSERAYQKAVEYARDRVQSRAI 327

Query: 346 ------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----- 394
                 G  +I  P ++R +  +   I A  AL+F  A + D A      A  AR     
Sbjct: 328 GSPDPAGVAIIRHPDVRRMLMTMRAQIEAQRALTFYAAAALDRAARHPVAAEAARNQALL 387

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             + PI K W  + A  + + A++  GG GYIEE  +A++YR++   +I  G+     LD
Sbjct: 388 NFLIPIVKGWNTEQANEITSLAVQVHGGMGYIEETGVAQYYRDARITAIYEGTTGIQALD 447

Query: 454 VLN 456
           ++ 
Sbjct: 448 LIG 450


>gi|5107394|gb|AAD40109.1| ZmaE [Bacillus cereus]
          Length = 382

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 94  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRQTDAVIETT 309

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 310 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361


>gi|72384174|ref|YP_293528.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72123517|gb|AAZ65671.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 594

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +      + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPMLTDGAIEALLTAGSDEQKATFLPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNSARFAVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVKRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                 + + A  +A   A    +A++  +A  R E  A    + P+ K W  +++  V 
Sbjct: 348 LMTMRGLVEGARSVAYVAAAICDVAHNHPDAAVRKESQAVYEFLVPVVKGWSTELSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A+HYR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDARILTIYEGT 441


>gi|116327188|ref|YP_796908.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116119932|gb|ABJ77975.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 570

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 69/396 (17%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KVEF P    L+ + I  G+    + R +  +      K   + ++         +    
Sbjct: 85  KVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIPWTVKSFISEIFYRVDTSLA-IAIGC 143

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V  A ++    T  + ++W PK+ + ++                +GLTE   G+D++ + 
Sbjct: 144 VNLAEILEHHATREMKEEWIPKLAAGKF-------------VCAMGLTEPDHGSDLSNLR 190

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS----DAFIMLAQVEGRVGC-------FLVPRLLED 264
           ++  K  +G + L+G K F++         A ++     G++G        FLV      
Sbjct: 191 TKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLTLARSGKIGSGARGLSLFLV------ 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDS 320
                +    ++ K+G   + T E+ F N+ G L+G+        E + ++ Y    L+ 
Sbjct: 245 -QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGE--------EGLGLVKYTMGILNG 295

Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           A M ++     LA     EA+ Y + R   G  LI+ P +K+ I  I  ++ A   L+  
Sbjct: 296 ARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIEREMYAMRCLTLE 355

Query: 376 LANSFDEAKSRS----EEAAYAR----------------IMAPITKYWCCKMAPAVIAEA 415
            +   D    R+    ++ A  R                I+ PI+K++C +    V+++A
Sbjct: 356 GSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFYCSETCLKVVSDA 415

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++  GGSGY E+  I+R YR++   +I  G+    +
Sbjct: 416 LQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQI 451


>gi|84499506|ref|ZP_00997794.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84392650|gb|EAQ04861.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 592

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 148/338 (43%), Gaps = 45/338 (13%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  +  A+    T    + + PK+ S E+  T             + LTE   G
Sbjct: 123 MMYPGLTHGAYSAIHAHGTDAQKQTYLPKMVSCEWTGT-------------MNLTEPHCG 169

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFL 257
           TD+  + ++ +   DG Y ++G K F+S+    MS+  I  +LA++ G       V  F+
Sbjct: 170 TDLGLMRTRAEPQDDGSYAITGQKIFISAGDHDMSENVIHLVLAKIPGGPEGIKGVSLFI 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  +D +P   N +   +++ K+G   NAT  + +    G+LLG+ +     +  M
Sbjct: 230 VPKFLVKDDNTPGDRNAVSVGKVEEKMGIHGNATCVMNYDGATGYLLGEEHKGMRAMFTM 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG--------ILIDQPVMKRAIA 360
                L  A+  +S   V+   A+ YA+     R V+G          LI  P ++R++ 
Sbjct: 290 MNEARLGVAMQGLSQATVAYENALAYAKDRLQGRAVTGAENPDGPADPLIVHPDIRRSLM 349

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMEC 418
           D    +  A A     A+  D +    ++ A     +M P+ K +       +   A + 
Sbjct: 350 DQKSFVEGARAFGLWSASLIDRSHRMGDDQAEGLVSLMTPVLKGFLTDQGFDMTVLAQQI 409

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 410 YGGHGYIEEWGMSQFTRDARIAMIYEGANGIQALDLVG 447


>gi|94309330|ref|YP_582540.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93353182|gb|ABF07271.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 595

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 160/374 (42%), Gaps = 64/374 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP + + + PK+ S  +  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVG------CFLV 258
           D+  + S+ +  +DG Y ++G K F+S+   D       ++LA++    G       F+V
Sbjct: 174 DLGILRSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVV 233

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N          
Sbjct: 234 PKFIPDANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353
           + + +++A + V    + L E     ++ YA+ R     ++G    D+P           
Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSLAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVR 348

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++A A+     A  TAL      S  +   R E      ++ P+ K +    A  
Sbjct: 349 RMLLTQKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFT 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465
              E M+  GG GYI E  + ++ R++  N I  G+     LD+L    L + G  L  F
Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAF 468

Query: 466 EQLFSTLEQDLGSS 479
            ++  T  ++ G+S
Sbjct: 469 GKIVQTFVEEEGTS 482


>gi|220925085|ref|YP_002500387.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949692|gb|ACL60084.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 597

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 163/387 (42%), Gaps = 75/387 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +M AL+   +    + + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAMAALLVHGSAEQKRTFLPKMTEGVWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y ++G K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGLLKTRAVPNPDGSYSITGTKIFISAGEHDLSENIIHLVLARIEGAPAGTKGISLFVV 232

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+LL   DGS    NG+    ++ K+G  +NAT  + +    G+LLG+ N          
Sbjct: 233 PKLLVKADGSLAERNGVSCGSIEQKMGIHANATCVMNYDGARGWLLGEANRGLN-----A 287

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGGILIDQP----------- 353
           + + ++ A ++V    + L+EA     + YA+ R     ++G    DQP           
Sbjct: 288 MFVMMNEARLAVGIQGLGLSEAAYQNAVAYAKDRLQGRALTGAQAPDQPADPIIVHPDVR 347

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              +  RA  + A  +   TAL   +A+   +   R     +  +M P+ K        A
Sbjct: 348 RTLLSIRAFNEAARALVMWTALQADVAHRATDPAERQAAEDHLGLMTPVVKGVLTDRGFA 407

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
              EA +  GG GYIEE  +++  R++    I  G+     +D++               
Sbjct: 408 NAVEAQQVFGGHGYIEESGMSQFVRDARIAQIYEGANGIQAMDLVG-------------R 454

Query: 471 TLEQDLGSSGKKVITILRDSISLCKED 497
            L +D    G+ ++  L++  + C+E+
Sbjct: 455 KLPRD---GGRAMMRFLQEVETFCREN 478


>gi|116332160|ref|YP_801878.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125849|gb|ABJ77120.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 570

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 69/396 (17%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KVEF P    L+ + I  G+    + R +  +      K   + ++         +    
Sbjct: 85  KVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIPWTVKSFISEIFYRVDTSLA-IAIGC 143

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V  A ++    T  + ++W PK+ + ++                +GLTE   G+D++ + 
Sbjct: 144 VNLAEILEHHATREMKEEWIPKLAAGKF-------------VCAMGLTEPDHGSDLSNLR 190

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS----DAFIMLAQVEGRVGC-------FLVPRLLED 264
           ++  K  +G + L+G K F++         A ++     G++G        FLV      
Sbjct: 191 TKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLTLARSGKIGSGARGLSLFLV------ 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDS 320
                +    ++ K+G   + T E+ F N+ G L+G+        E + ++ Y    L+ 
Sbjct: 245 -QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGE--------EGLGLVKYTMGMLNG 295

Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           A M ++     LA     EA+ Y + R   G  LI+ P +K+ I  I  ++ A   L+  
Sbjct: 296 ARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIEREMYAMRCLTLE 355

Query: 376 LANSFDEAKSRS----EEAAYAR----------------IMAPITKYWCCKMAPAVIAEA 415
            +   D    R+    ++ A  R                I+ PI+K++C +    V+++A
Sbjct: 356 GSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFYCSETCLKVVSDA 415

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++  GGSGY E+  I+R YR++   +I  G+    +
Sbjct: 416 LQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQI 451


>gi|228921920|ref|ZP_04085232.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229070975|ref|ZP_04204202.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185]
 gi|228712157|gb|EEL64105.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185]
 gi|228837752|gb|EEM83081.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 347

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 59  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 168

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 221 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|16950563|gb|AAL32268.1| putative acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           kurstaki]
          Length = 309

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 21  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 75

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 76  KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 130

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 131 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 182

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 183 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 236

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V   A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 237 IAKYFASKMAMKVATNAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 288


>gi|90422257|ref|YP_530627.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104271|gb|ABD86308.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 596

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M   +T  +  AL+   R  +   + PK+ + E+  T             + LTE + GT
Sbjct: 126 MYHGLTMGATAALLVHGRPEQKAIFIPKMVTGEWTGT-------------MNLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++  K +DG Y ++G K F+S+   D       ++LA++EG       V  F+V
Sbjct: 173 DLGLLRTKAIKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P++L +     G  NG+    +++K+G   NAT  + + +  G+L+G+ N     +  M 
Sbjct: 233 PKILVNADGSLGGRNGVTCGAIEHKMGIHGNATCVMNYDDATGWLIGEENKGMQGMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355
               L  A+  ++   V+   A+ YA+ R     ++G    D+P              + 
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVIYAQERLQGRSLTGAKATDKPADPIIVHPDIRRTLLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A  +   TAL   +A+  ++AK R     +  +M P+ K     +  A    A
Sbjct: 353 IRAFNEAARAMVVWTALKGDVAHRSEDAKERQAADDHMGLMTPVLKGVLTDVGFANAVSA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI +  + +  R++    I  G+     LD++ 
Sbjct: 413 QQVWGGHGYIADNGMEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|229182035|ref|ZP_04309331.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W]
 gi|228601450|gb|EEK58975.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W]
          Length = 347

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 59  KRWGTEEQKRKWLP----KMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 168

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 221 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|83721478|ref|YP_441121.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167579871|ref|ZP_02372745.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
 gi|257140217|ref|ZP_05588479.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83655303|gb|ABC39366.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 595

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R     ++G    D+P         ++R +         A A ++  A  
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454


>gi|40788122|emb|CAD60270.1| putative feruloyl-CoA dehydrogenase [Pseudomonas fluorescens]
          Length = 584

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 49/350 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + P I S    PT             + LTE R  +D+  +  + +  +DG Y
Sbjct: 143 APWLQERYLPAIISGASLPT-------------MCLTEPRLASDVGLLRCRAEPQADGSY 189

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCYQRL 275
            LSG K F+S    D       ++LA++    EG  G   FLVP+ LE G  NG+    +
Sbjct: 190 RLSGSKLFISGGEHDLTDNILHLVLARLPDAPEGSRGISLFLVPKRLEQGQDNGVRCNGI 249

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G + +AT  L F    G+L+G+ N     +  M     L   +  +  +  +   A
Sbjct: 250 EHKMGIKGSATCSLVFDAAQGWLVGEANRGLAAMFVMMNSARLHVGLQGLGHVEAAWQNA 309

Query: 336 IHYARRRHV-------SGGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + YA  R         +GG       +   P M+R + ++        A+ +  A+  D+
Sbjct: 310 LAYAGERQQMRAPLRPAGGAAQAADPIRYHPAMRRVLLELRATSEGLRAIGYWAAHLLDQ 369

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+      +R +    A+++ PI K +  +      + A++  GG GY+ E +I +  R+
Sbjct: 370 AEHHPEPLARRQADQLAQLLTPIIKAFFTEQGFRQASNALQVFGGYGYVAEFAIEQTLRD 429

Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTN----LFEQLFSTLEQDLGSSG 480
           S    I  GS      D+L   +L  G      L EQL    EQ    +G
Sbjct: 430 SRIAMIYEGSNEIQANDLLLRKVLGDGGQGFALLLEQLRDEAEQGAAVAG 479


>gi|226227951|ref|YP_002762057.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091142|dbj|BAH39587.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 596

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 48/317 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  IT++    +DG Y ++G K F+S+   D       ++LA++     G 
Sbjct: 164 LTEAHAGTDLGIITTKAVPAADGTYAITGQKIFISAGEHDLTENIVHLVLARLPDAPSGT 223

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   FLVP+ L       G+ N +    +++K+G +++AT  L+F N  G+++G+ +  
Sbjct: 224 KGISLFLVPKFLPTADGGVGARNAVTCGSVEHKMGIKASATCVLDFDNATGWMVGEAH-- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------------HVSG 346
               + M+ + + ++SA ++V    + L+E     A+ YA+ R              V+ 
Sbjct: 282 ----KGMRAMFVMMNSARLAVGLQGLGLSEVAYQNALAYAKERLQGRSLTGPKNAGGVAD 337

Query: 347 GILIDQPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
            IL+   V K     +A+ +    +A A  +   L +   +A  R +     ++M P+ K
Sbjct: 338 PILVHPDVRKGLLRIKALNEGMRSLAYAVGIRIDLEHRHPDAAVRQDAEDMVQLMTPVIK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
            +           A++ +GG GYI+E  I ++ R++    I  G+     LD++   L  
Sbjct: 398 AFLTDKGFDNTNIALQTLGGHGYIKEYGIEQYVRDARIAQIYEGTNAVQALDLVGRKLPM 457

Query: 460 KGTNLFEQLFSTLEQDL 476
           +G  L  + F  ++ D+
Sbjct: 458 EGGRLVRRFFELVKADV 474


>gi|206972798|ref|ZP_03233720.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134]
 gi|206731682|gb|EDZ48882.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134]
          Length = 382

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 94  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 309

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 310 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361


>gi|226357335|ref|YP_002787075.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319325|gb|ACO47321.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 611

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL  + +  +   + PKI S E+  T             + LTE   GT
Sbjct: 130 MYPGLSHGAYSALHAVGSDELKNLYLPKIVSGEWTGT-------------MCLTEPHAGT 176

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  I ++     DG Y ++G K F+S+    M+D  +  +LA++EG       +  F+V
Sbjct: 177 DLGMIRTRATDNGDGSYSVTGTKIFISAGEHDMADNIVHLVLARLEGSPEGTKGISLFVV 236

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  NG+    L++K+G   NAT  L F    G+L+G++N     +  M 
Sbjct: 237 PKFVPSAEGGVGERNGVVCGSLEHKMGIHGNATAVLNFDGAKGWLVGEVNKGMNHMFIMM 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVS---GGILIDQPVMKRAIADIA 363
               L + +  +     +   A+ YA+ R        VS      +I  P ++R +    
Sbjct: 297 NAARLGTGLQGLGLGEGAYQNALVYAKDRIQMRHTPRVSSEPADPIIVHPDVRRMLLTGK 356

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
               A  AL+  LA S D      +   R E A    ++ PI K +       V  ++ +
Sbjct: 357 AYTEAGRALAMWLALSIDTEHHHPDEARRKEAADLVALLTPIAKAFMTDNGFHVAVQSQQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
             GG GYI+E  + +  R++    I  G+     LD+L   +L  G    ++L  TL++
Sbjct: 417 IYGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLLGRKVLMDGGKKLQKLAGTLQE 475


>gi|152980951|ref|YP_001354781.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium
           sp. Marseille]
 gi|151281028|gb|ABR89438.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium
           sp. Marseille]
          Length = 596

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 50/328 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + GTD+  + S+ +  +DG Y ++G K 
Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAQCGTDLGLLRSKAEPQADGSYKITGSKI 198

Query: 234 FLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+   D       ++LA++    EG  G   F+VP+ L D     G+ N +    L+ 
Sbjct: 199 FISAGEHDMAANILHLVLARLPDAPEGTKGISLFIVPKFLPDAAGKLGARNPIFCGALEE 258

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT ++      G+L+G+ N     +  M     L   + S+    V+   A+ 
Sbjct: 259 KMGIHGNATCQMNIDGATGWLIGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNALV 318

Query: 338 YARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA+ R     ++G    D+P         ++R +           A S  +A   D+  +
Sbjct: 319 YAKDRLQMRSLTGPKATDKPADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVALQIDKELN 378

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +EA  A       ++ PI K +         +EAM+  GG G+I E  + ++ R+S  
Sbjct: 379 HPDEAVRAEAVDEVALLTPIIKAFLTDNGWISTSEAMQVYGGHGFISEWGMEQYVRDSRI 438

Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464
           N I  G+     LD+L    LL+ G  L
Sbjct: 439 NMIYEGTNTIQSLDLLGRKILLDNGAKL 466


>gi|323507642|emb|CBQ67513.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 651

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 21/295 (7%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKI-------SDGIYCLSGHKWFLSSPMSDAFIM 245
           +T+   G  +TE+ GG+D++   +  + +       +   + +SG KWF S+   D  + 
Sbjct: 186 RTAWTAGQWMTERPGGSDVSRTETVAKPLNPNKKPEAGDAFVISGFKWFSSATDGDIALA 245

Query: 246 LAQVE-----GRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           LA+       G  G  L    + D   G  NG+   RLK K+G +   T ELE     G 
Sbjct: 246 LARTSDDLTLGSKGLSLFLIKIRDDRTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGE 305

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMK 356
           L+G+L      +  +  +  L SA  +V  +   L  A  YA+ R   GG  +D+ P+  
Sbjct: 306 LVGELGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLDRLPLHT 365

Query: 357 RAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  + +       + F    L  + +  ++   +    R++ P  K +    A     
Sbjct: 366 DQLLKVTVTYRVFLQIFFSNVLLMGASEAGQASKRDQTRLRLLTPALKAFVATRASESYL 425

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFE 466
             +E  GG GY+EE  +A   R+     I  G+   + LDVL +L   KG  L E
Sbjct: 426 TLIESFGGQGYMEEVGMAEMLRDGTVERIWEGTPAILSLDVLRVLVQSKGQALLE 480


>gi|301166975|emb|CBW26554.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 585

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 54/333 (16%)

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPM-QKTSV 196
           L L+AQL    L      S++ +A  T+    +H+      F  E       PM  +  +
Sbjct: 120 LMLLAQLSRACL-----ASSTQMAFFTSIGEMIHR------FCDEETAQRLVPMIARGEI 168

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---- 252
           +  + LTE   G+D+  I +      DG Y L+G K F+++       +LA+++G     
Sbjct: 169 SGSMCLTEPGCGSDLGMIKTSATPTEDGKYLLNGSKIFITNGGGGLGFVLARIKGDKEGL 228

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             +  FL  + + +    GL Y   KN  K+G   + T E+ + N+   L+G+       
Sbjct: 229 AGISMFLCEQNIPE--KEGLNYSIAKNEEKMGMHGSFTTEVVYENSVATLVGEAG----- 281

Query: 309 VEDMKILIYLDSAIMSVSGMRV------SLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K +++L +      GM+       S+  AI YA  R   G  L + P+MKR + D 
Sbjct: 282 -KGFKYMLHLMNEARIAVGMQALGTIEGSIGYAISYASEREQFGKPLTELPLMKRNLEDF 340

Query: 363 ALDIAAATAL------SFRLANSFDEAKSRSEEAA------------YARIMAPITKYWC 404
             +  A  AL       + +    D  K +S + +            + R   P+ KY+ 
Sbjct: 341 TTERDALRALLVDTISHYDIFQRLDLKKQKSGDLSKEEEELLKESSLWTRKRTPLVKYYA 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           C+ A  +   A++ +GG G++EE  + R++R+S
Sbjct: 401 CEQATLLSQRAIQVLGGYGFMEEYPVERYHRDS 433


>gi|296140757|ref|YP_003648000.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028891|gb|ADG79661.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 387

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MV    +    ++W PK+          APM    +     LTE   G+D A++T++ ++
Sbjct: 97  MVDTYGSQEQRQEWIPKL----------APM---DIMASYCLTEPGAGSDAASLTTKAER 143

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + L+G K F+S    SD ++++A+ EG     +   L++ G+P GL +   + K+
Sbjct: 144 DGDD-FVLNGTKQFISGGGASDLYVVMARSEGEGARGISTFLVDKGTP-GLSFGPAEVKM 201

Query: 280 GNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           G  S  T ++ F N                  FG  +  LN              L+ A 
Sbjct: 202 GWHSQPTTQVIFENVRIPASRMLGGPEGAGKGFGIAMNGLNGGR-----------LNIAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G + +   A+ Y   R   G  LID+P ++  +AD+A  + AA  + +R A + DE
Sbjct: 251 CSMGGAQAAYDLALQYMTERETFGRKLIDEPTIRFTLADMATSLEAARLILWRAATALDE 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E      +  + K +  +    V  +A++  GG GY+ E  + +  R+   N I
Sbjct: 311 NDPDKVE------LCAMAKKFVTETCFQVADQALQLHGGYGYLHETGVEKIVRDLRVNRI 364

Query: 443 LLGSGNAM 450
           L G+   M
Sbjct: 365 LEGTNEIM 372


>gi|167835477|ref|ZP_02462360.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 595

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVINLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R     ++G    D+P         ++R +         A A ++  A  
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454


>gi|167585485|ref|ZP_02377873.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 595

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 47/322 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++  N I  G+ +   LD+L
Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453


>gi|73540152|ref|YP_294672.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72117565|gb|AAZ59828.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 595

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 160/394 (40%), Gaps = 80/394 (20%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP + + + PK+ + E+  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQAYLPKLVTGEWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLV 258
           D+  + ++ +   DG Y L+G K F+S+    M++  I L         Q    +  F+V
Sbjct: 174 DLGILRTKAEPQPDGSYLLTGTKIFISAGEHDMAENIIHLVLARLPDAPQGTKGISLFVV 233

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D  G+P   NG+    +++K+G   NAT  +      G+L+G+ N          
Sbjct: 234 PKFIPDASGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWLVGEANKGLN-----A 288

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353
           + + +++A + V    + L E     ++ YA+ R     ++G    D+P           
Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVR 348

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++A A+     +  TAL      S  +   R +      ++ P+ K +    A  
Sbjct: 349 RMLLTQKAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-------------- 456
              E M+  GG GYI E  + ++ R++  N I  G+     LD+L               
Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLGRKILGDMGAKMKAF 468

Query: 457 -------LLEKGTNLFEQLFSTLEQDLGSSGKKV 483
                  + E+GTN   Q F     DLG   +K+
Sbjct: 469 GKIVQAFVEEEGTNEAMQEFVNPLADLGDKVQKL 502


>gi|127513796|ref|YP_001094993.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126639091|gb|ABO24734.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 602

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 44/306 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244
           PMQ+   A  + +TE   G+ +A IT++    +DG Y ++G K F+S     +++  I  
Sbjct: 152 PMQEGRFAGTMAMTEPGQGSALADITTKAVPQADGSYLITGQKMFISGGDQSITENIIHM 211

Query: 245 MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN 293
            LA++EG       +  F+VP+ L  +DGS    N +    L +K+G R+  +  L F  
Sbjct: 212 TLAKIEGAPAGVKGISLFIVPKFLVNDDGSQGERNDVALAGLLHKMGFRNTTSTVLSFGE 271

Query: 294 ---TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-- 344
                G+L+G+ +     +  M    +I +   +A++   G   SL     YAR R    
Sbjct: 272 KGGAVGYLVGEPHKGLAYMFQMMNEARIFVGSTAAVLGYQGFNASL----EYARERPQGR 327

Query: 345 --------SGGILIDQP-------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                   S  I I Q        + ++A  + +L +    +  F  +++ D  ++R + 
Sbjct: 328 LPSNKDPESKQIPIVQHADVRRMLLAQKAYVEGSLALCLYASSLFEDSHTADTPEARQQA 387

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ PI K W  K A      A++ +GGSGYI E  + ++YR++  N I  G+   
Sbjct: 388 FMLLDLLTPIVKSWPSKYALKANDLAIQVLGGSGYIREYPVEQYYRDNRLNPIHEGTEAI 447

Query: 450 MVLDVL 455
             LD+L
Sbjct: 448 HGLDIL 453


>gi|161523758|ref|YP_001578770.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189351481|ref|YP_001947109.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|221200078|ref|ZP_03573121.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221206769|ref|ZP_03579781.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221211260|ref|ZP_03584239.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|160341187|gb|ABX14273.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189335503|dbj|BAG44573.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|221168621|gb|EEE01089.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221173424|gb|EEE05859.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221180317|gb|EEE12721.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 595

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 60/373 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 SPELQKAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGL 270
            ++G K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+
Sbjct: 191 SITGTKIFISSGEHDMASNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATAL 372
           +   ++ YA+ R     ++G    D+P              + ++A A+ A      +AL
Sbjct: 311 AYQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                 S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ D + 
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKIVSDFVE 477

Query: 493 LCKEDKGLARFLT 505
                  +A F+ 
Sbjct: 478 AEGVKPEMAEFVN 490


>gi|319785585|ref|YP_004145061.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171473|gb|ADV15011.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 596

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 75/412 (18%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++T  T      W P++    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKATWLPRMIEGAWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+    MSD  +  +LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHDMSDNIVHLVLARIEGAPEGVKGISLFI 231

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+L  D     G+ N +    ++ K+G   N+T  + +    G LLG+ N     +  M
Sbjct: 232 VPKLKLDPSGNPGNRNTVSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEPNGGLKAMFTM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKR--- 357
                L   +  +S   ++   A+ YA+     R +SG          +I  P ++R   
Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVGYAKDRLQGRSLSGPKAPDKKADPIIVHPDIRRSLM 351

Query: 358 ---AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
              A  +    +A  TA+   +A+   + K R     Y  +M P+ K             
Sbjct: 352 TMKAFNEAGRALALWTAIKSDIAHRSGDDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  +++  R++    I  G+     LD++                  +
Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            LG   G+ V    ++    C+E++       EK+A  + A    + G+ND+
Sbjct: 455 KLGLHGGRAVQAFFKEVGEFCEENRA-----NEKMAPFTKA---LKKGLNDL 498


>gi|295699088|ref|YP_003606981.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295438301|gb|ADG17470.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 600

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  + + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEELKQRYVPKMISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++ + ++ +   DG Y +SG K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLSLVRTRAEPQGDGSYRISGTKIFITWGEHDMTENIVHLVLARTPSAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358
            M I++      + V G+ +S     +A+ YA+ R     V G       +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGVQGVAISDRAYQQAVAYAKERVQGRPVDGSAKQSVAIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           ++ +      A AL++       LA+   +  +R+   A    + PI K W  +M+  V 
Sbjct: 348 LSTMRALTEGARALAYVSASHCDLAHRHPDRATRANHQAIYEYLVPIVKGWSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|229192908|ref|ZP_04319865.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876]
 gi|228590518|gb|EEK48380.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876]
          Length = 347

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 59  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMKGVSTNKMSKLLASNSSHIAEIH 168

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 221 SRRRKQGNRYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|163736082|ref|ZP_02143501.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161389952|gb|EDQ14302.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 593

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 66/398 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPR-LLEDG 265
            +   DG Y ++G K F+SS    M+D  I  +LA++ G       V  F+VP+ +++DG
Sbjct: 179 AEPQDDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKDG 238

Query: 266 SP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
                 NG+   +++ K+G   N+T  + + +  G+LLG  +     +  M     L   
Sbjct: 239 GSLGDRNGVSVGKIEEKMGIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369
           +  ++    +   A+ YA+ R     V+G          LI  P ++R + D       A
Sbjct: 299 MQGLAQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D+A    ++ A   I  + P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFILWGAKMIDQAHRAEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             ++++ R++    I  G+     LD++                L QD    GK V+   
Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462

Query: 488 RDSISLCKED----KGLARFLTEKIALAS---SAAALY 518
               + CKE+    +G ++   E +  AS    AA +Y
Sbjct: 463 EMVKNFCKENGDISEGYSKEFIEPLKAASKDLQAAGMY 500


>gi|302912925|ref|XP_003050806.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI
           77-13-4]
 gi|256731744|gb|EEU45093.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI
           77-13-4]
          Length = 636

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 55/316 (17%)

Query: 199 GLGLTEKRGGTDI--------------AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
           G  +TE+ GG+D+              A + S+ + I  G + ++G KWF S+  S   +
Sbjct: 191 GQWMTERTGGSDVSLTETTAIYEPTPEAKLASKIENIPLGPWSINGFKWFSSATDSRMTV 250

Query: 245 MLAQV-EGRVGCFLVP-------------RLLEDGSP-NGLCYQRLKNKIGNRSNATVEL 289
           +LA+  +G +  FL P             R +E+G   NG+  QRLKNK G +S  T EL
Sbjct: 251 LLARTAKGGLSTFLAPMRKHDPQATTSTGRPVENGEALNGVRIQRLKNKSGTQSLPTAEL 310

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
              +  G+L+G        +  +  L  + S++ ++S +   L  A  YAR R +  G  
Sbjct: 311 VLEDMRGWLIGQEGRGIHEISTVLTLTRVHSSVAAMSYVGRGLGIARAYARVREIGAGKG 370

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----------------SRSE 388
               LI+  +  R +A +  +      L+   A+    ++                S  +
Sbjct: 371 ARMKLIESSLHMRTLAKMTSEYRGLMLLTMLTAHVLGVSEHPVDANLPPALAALTPSAKD 430

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSIL 443
                R++  +TK + CK +  ++   ME +GG GY+  EE+   ++AR +R+     I 
Sbjct: 431 APPLIRVLTQLTKAYVCKASVQLLFSCMESLGGVGYLLNEEQEYLNVARLHRDCAVLPIW 490

Query: 444 LGSGNAMVLDVLNLLE 459
            G+ + +  D L  L+
Sbjct: 491 EGTTDVLSTDFLRALK 506


>gi|187922667|ref|YP_001894309.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713861|gb|ACD15085.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 595

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +  SDG Y
Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++ G       +  F+VP+ +     E G  NG+
Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPGAPNGTKGISLFIVPKFVPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   + S+    +
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEI 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               ++ YA+ R              +   +I  P ++R +        AA A S+  A 
Sbjct: 311 GYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAARAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFESTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|296163804|ref|ZP_06846494.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295885951|gb|EFG65879.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 566

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 115 LCPLLTDGAIEALLTAGSEEQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 161

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 162 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 221

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 222 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 278

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 279 YMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 338

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +A +     A+ AL++  A   D      +  +R+E  A    + PI K W  +++  V 
Sbjct: 339 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAEHQAIYEYLVPIVKGWSTELSIDVT 398

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 399 SLGVQVHGGMGFIEETGAAQYYRDA 423


>gi|254480326|ref|ZP_05093574.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039888|gb|EEB80547.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 391

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 29/265 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE  GG+D+A I +  +   D  Y ++G K F+S  M   ++  A   G+ G   
Sbjct: 134 ISLGITEPSGGSDVAGIQTTAKAEGD-FYIVNGSKTFISGGMGANWVSTAVRTGKAGPKG 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           V  LL      G+    L  K G   + T  L F N              GFL+   N +
Sbjct: 193 VSMLLIPMDLAGVSRTPLDKKQGWWCSDTATLYFDNVKVPKKYLMGEEGHGFLVIMHNFN 252

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +   E + +++ +++A       R  L EA+ +A+ R   G  L D  V++  +A +   
Sbjct: 253 S---ERLAMIVTMEAA------ARCCLEEAVTWAQERKTFGKRLADHQVIRHKVAMMKQK 303

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I A  A +  L  +F E +    + A  ++ A  T  +C +       EA + +GGS Y+
Sbjct: 304 INATQAYALHLTEAFIEGRCHPGDLAMLKVQASETMEFCAR-------EASQILGGSSYL 356

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
               + R YRE   N+I  GS   M
Sbjct: 357 RGSKVERIYREVRVNAIGGGSEEIM 381


>gi|146339215|ref|YP_001204263.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192021|emb|CAL76026.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 592

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 161/362 (44%), Gaps = 56/362 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249
           LTE + G+D+ A+ ++ ++ +DG Y ++G K +++     M+D  +           A  
Sbjct: 163 LTEPQAGSDVGALRTRAERAADGTYRIAGSKIYITYGEHDMTDNIVHFVLARLPDAPAGT 222

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +G +  FLVP+ L +     G+ N +    +++K+G  ++ T  +   +     G+L+G+
Sbjct: 223 KG-ISLFLVPKFLVNADGSLGARNDIYATGVEHKLGMHASPTCTMTMGDNGGAIGYLIGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352
            N     +  M     L   +  V     +  +A+ YA+ R     +         +I  
Sbjct: 282 ENAGMRCMFTMMNQARLGVGLEGVGVADRAYQQALAYAQERRQGRAVGSKGAGSDAIIAH 341

Query: 353 PVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P +KR +  +      +  I  ATA++  +A    +   R+E AA   ++ PI K +   
Sbjct: 342 PDVKRMLMQMRSLTAASRSICYATAVALDVAVRAKDPVVRAEAAARGALLTPIAKAFSTD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------------- 453
           +   V    ++  GG G+IEE   A+HYR++   +I  G+     +D             
Sbjct: 402 IGNEVAYLGVQIHGGMGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGAS 461

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           V  LL++ T +  ++ ++ +   G++G K    LRD++         +R+L EK+  A +
Sbjct: 462 VFKLLDELTEIVRRVEASNDPAFGTTGTK----LRDALGALDRS---SRWLLEKLGTAPN 514

Query: 514 AA 515
            A
Sbjct: 515 DA 516


>gi|90418708|ref|ZP_01226619.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336788|gb|EAS50493.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 637

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 49/389 (12%)

Query: 124 FEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           F+P    Q   H +  A    M+       M P +T+ ++ A+     VH        S 
Sbjct: 135 FDPEYGGQGLPHTLATAVSEYMSSANMAFAMYPGLTAGAIAAI----SVHG-------SN 183

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---P 238
           E   T    M   S    + LTE   GTD+  + ++     DG Y +SG K F+S+    
Sbjct: 184 EQKQTYLPKMIDGSWTGTMNLTEPHCGTDLGLLRTKAVPQDDGSYRISGQKIFISAGEHD 243

Query: 239 MSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNA 285
           M+D  +  +LA++EG       +  F+VP+ +   DG+P   NG+    L+ K+G   NA
Sbjct: 244 MADNIVHLVLARIEGAPEGVKGISLFIVPKFVLDADGNPGERNGVVCGSLEEKMGIHGNA 303

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T  + + +  G+L+G+ +     +  M     L   +  ++   V+   A+ YAR     
Sbjct: 304 TCVMNYDDATGYLIGEADKGLRAMFTMMNEARLGVGVQGLAISEVAYQNAVTYARERIQG 363

Query: 342 RHVSGGI--------LIDQPVMK------RAIADIALDIAAATALSFRLANSFDEAKSRS 387
           R +SG          +I  P ++      R+I +    +   TAL   L++  DE K R 
Sbjct: 364 RSLSGAKAPEKKADPIIVHPDIRRILMTIRSINEAGRALVLWTALKGDLSHRADEEKDRQ 423

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
               +  +M P+ K             A +  GG GYI E  + +  R++    I  G+ 
Sbjct: 424 AADDWMGLMTPVIKGVLTDKGFDNAVMAQQVYGGHGYIGEWGMEQFVRDARIAQIYEGAN 483

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
               LD++   L   G    +  F+ + Q
Sbjct: 484 GIQALDLVGRKLGLNGGRAVQSFFAEVGQ 512


>gi|148252398|ref|YP_001236983.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404571|gb|ABQ33077.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 596

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 149/362 (41%), Gaps = 63/362 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K + PK+ + E+  T             + LTE   GTD+  + ++  + +DG + +SG 
Sbjct: 148 KTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFKISGT 194

Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       ++LA++EG       V  F+VP+ L +     G  NG+    +
Sbjct: 195 KIFISAGEHDLADNIIHLVLARIEGAPAGIKGVSLFVVPKFLVNPDGSVGQRNGVTCGSI 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   N+T  + + N  G+L+G+ N     +  M     L  A+  ++   V+   A
Sbjct: 255 EHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNA 314

Query: 336 IHYARRR-------------HVSGGILIDQPVMK-----RAIADIALDIAAATALSFRLA 377
           + YAR R               +  I++   V +     RA  + A  +   T+L   +A
Sbjct: 315 VAYARERIQGRSLTGPKAPDKAADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLKSDVA 374

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   + K R     +  +M P+ K +   M  A    A +  GG GYI E  + +  R++
Sbjct: 375 HRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVAAQQMYGGHGYIAEWGMEQFVRDA 434

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               I  G+     LD++                L +D    G+ V+    +  S  KE 
Sbjct: 435 RIAMIYEGANGIQALDLVG-------------RKLPRD---GGRAVMAFFNEVGSFAKEQ 478

Query: 498 KG 499
            G
Sbjct: 479 GG 480


>gi|260574555|ref|ZP_05842559.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259023451|gb|EEW26743.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 591

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA+  G   
Sbjct: 161 MNLTEPQCGTDLGLMRTKAEPQADGSYAITGTKIFISAGEHDLAENIIHLVLARAPGGAP 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L +     G+ N +   ++++K+G   +AT  + +    GFLLGDL+
Sbjct: 221 GIRGVSLFIVPKFLVNPDGSLGARNKVTAGKVEHKMGIHGSATCVMNYDGATGFLLGDLH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351
                +  M     L   +   +    +   A+ YAR     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAVAEAAFQNAVAYARERLQGRAVTGDANPAGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R++ D    +  A A +   A+  D ++ + + AA A I  + P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFVEGARAFTLWGAHLIDRSRRQGDAAAEAMISLLTPVIKGFQTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +   A +  GG GYIE   +++  R++    I  G+     LD++ 
Sbjct: 401 EMAVAAQQVWGGHGYIEANGMSQFVRDARIAMIYEGANGVQALDLVG 447


>gi|224368635|ref|YP_002602798.1| Acd5 [Desulfobacterium autotrophicum HRM2]
 gi|223691351|gb|ACN14634.1| Acd5 [Desulfobacterium autotrophicum HRM2]
          Length = 602

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 41/318 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+  +K  DG Y ++G+K F++     +++  I  +LA+VEG     
Sbjct: 164 LTEPEAGSDVGALTTSAKKNPDGTYSITGNKIFITGGDHDLAENIIHPVLARVEGAPSGS 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302
             +  F+VP++  +     G  N +    ++ K+G   +AT  +      N  GFLLG  
Sbjct: 224 KGISIFIVPKIWVNDDKSLGKNNDVQCTGIEEKMGMHGSATCSMSLGSKGNCRGFLLGQE 283

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------- 349
           N     +  M     L+      S   ++   A+ YA++R + G  L             
Sbjct: 284 NQGLAIMFHMMNEARLNVGFQGSSAASMAYLYALDYAKQR-IQGKALHDMKNPEAKSVPI 342

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYW 403
           I  P ++R +  +   +    +L F ++N FD      +     +      ++ PI K +
Sbjct: 343 IQHPDVRRMLTWMKAHVDGMRSLVFYVSNLFDTQGLFPDTPEGEQAGKLIELLTPIVKAY 402

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG 461
           C +    V  +A++  GG GYI E  + +  R+    SI  G+     +D+L   L   G
Sbjct: 403 CAQRGFEVCVQAVQVHGGYGYISEFPVEQLVRDVKIASIYEGTDGIQAMDLLARKLGMDG 462

Query: 462 TNLFEQLFSTLEQDLGSS 479
             +F  L   + + + S+
Sbjct: 463 GKVFTGLLEIIGKTIKSA 480


>gi|115387195|ref|XP_001211103.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114195187|gb|EAU36887.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 616

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 44/317 (13%)

Query: 202 LTEKRGGTDI-----AAITS-----QGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           +TE+ GG+D+      A+ S     +G+  +I  G Y LSG K+F S+   +  ++LA+ 
Sbjct: 165 MTERVGGSDVRNSETIAVYSPLPSKEGRFGRIDQGDYLLSGFKFFSSATDCNVALILAKT 224

Query: 250 EG-RVGCFLVPRLL----EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           E  ++  F+ P +     EDG      NG+   RLKNK G +   T ELE  +    ++G
Sbjct: 225 ESSQLSLFVAPTVKTIIGEDGKEKEVTNGIRIHRLKNKFGTKELPTAELELKDVRAHMIG 284

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             +     +  +  +    + I ++S +R ++  A  +AR R      L   P+  R +A
Sbjct: 285 PKDRGIATIALLLNVTRTHNFITALSCLRRAMDIAKAFARSRKTIDQPLWTFPMHLRMLA 344

Query: 361 DIALDIAAATALSFRL------------ANSFDE----AKSRSEEAAYARIMAPITKYWC 404
            + +       L+F              AN  D     AKS        R +   +K   
Sbjct: 345 QLEVKHRGWMQLAFFTTSLLSYGDHGFPANVSDHYSLLAKSPELTTLVLRALTSTSKAVI 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           CK A     E  E +GG GY++E      +++R +R++ +NS+  G+ N +  + +  L 
Sbjct: 405 CKSATLAFQECQEAMGGVGYMDEPEEPEFNVSRLWRDTASNSVWEGTSNVLASETVRHLT 464

Query: 460 KGTNLFEQLFSTLEQDL 476
           +G NL  + F T  +D+
Sbjct: 465 RGHNL--ESFGTWIRDV 479


>gi|319426357|gb|ADV54431.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 585

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++   + DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++  +     GS NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + + N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           RH    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|167617946|ref|ZP_02386577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 595

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A S  +   R E      ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKALSHADEVVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454


>gi|120598792|ref|YP_963366.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120558885|gb|ABM24812.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
          Length = 585

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++   + DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++  +     GS NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + + N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           RH    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|146293131|ref|YP_001183555.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564821|gb|ABP75756.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 585

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++   + DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++  +     GS NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + + N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           RH    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|148253980|ref|YP_001238565.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146406153|gb|ABQ34659.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 592

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 163/362 (45%), Gaps = 56/362 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249
           LTE + G+D+ A+ ++ ++  DG Y ++G K F++     M+D  +           A  
Sbjct: 163 LTEPQAGSDVGALRTRAERAPDGSYRITGSKIFITYGDHDMTDNIVHFVLARLPDAPAGT 222

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
           +G +  FL+P+ L  +DGS    N +    +++K+G  ++ T  +   +     G+L+G 
Sbjct: 223 KG-ISLFLIPKFLVNKDGSLGARNDIYPSGIEHKLGMHASPTCTMTMGDHGGAIGYLIGQ 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352
            N     +  M     L   +  V     +  +A+ YA+ R     +         +I  
Sbjct: 282 ENAGMRCMFTMMNQARLGVGLEGVGVADRAYQQALAYAQDRKQGRAVGSKGSGSDAIIAH 341

Query: 353 PVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P +KR +  +      +  I  ATA++  +A    +   R+E AA   ++ PI K +   
Sbjct: 342 PDVKRMLMQMRSLTAASRSICYATAVALDVAVRAKDPAVRAEAAARGALLTPIAKAFSTD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------------- 453
           +   V    ++  GG G+IEE   A+HYR++   +I  G+     +D             
Sbjct: 402 IGNEVAYLGVQIHGGMGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGAS 461

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           V  LL++ T++  ++ ++ +   G++G K    LR+++S  +     +R+L EK+  A +
Sbjct: 462 VFKLLDELTDIVRRVEASNDPAFGTTGAK----LREALSALERS---SRWLLEKLGTAPN 514

Query: 514 AA 515
            A
Sbjct: 515 DA 516


>gi|222147473|ref|YP_002548430.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221734463|gb|ACM35426.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 597

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 166/385 (43%), Gaps = 67/385 (17%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   T +  + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILAHGTDQQKQTYLPKMVEGTWSGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+    MS+  I  +LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHGMSENIIHLVLARIEGAPEGTKGISLFI 231

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+++  EDG+    NG+    +++K+G   NAT  + +    G+L+G  N     +  M
Sbjct: 232 VPKVIVGEDGALGAKNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGAENKGLSAMFVM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360
                L   +  +S   ++   A+ YAR     R +SG    D+        P ++RA+ 
Sbjct: 292 MNEARLGVGLQGLSIAEIAYQNAVTYARERIQGRSLSGAKAPDKTADPIIVHPDIRRALM 351

Query: 361 DI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            I A + A       TAL   +A+   +A  +        +M PI K             
Sbjct: 352 TIKAFNEAGRAFTLWTALKSDIAHRAGDAAEKQTADDILGLMTPILKGVLTDKGFDHAVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  ++++ R++    I  G+     LD++                  +
Sbjct: 412 AQQVYGGHGYIEEWGMSQYVRDARIAMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLGSSGKKVITILRDSI-SLCKEDK 498
            LG +G + +  L + I + C+E++
Sbjct: 455 KLGLNGGRAVMALFNEIGAFCEENR 479


>gi|167561592|ref|ZP_02354508.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
 gi|167568828|ref|ZP_02361702.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 595

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ + E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQKVYLPKLVAGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFIPDASGEPGERNGVK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379
              ++ YA+ R     ++G    D+P         ++R +         A A ++  A  
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454


>gi|322796936|gb|EFZ19288.1| hypothetical protein SINV_12082 [Solenopsis invicta]
          Length = 401

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++   K++  +Y ++G K W  +   + A ++ A  +       +  
Sbjct: 142 LSEPGNGSDAGAASTTA-KLNGSVYTINGTKSWITNGFEASAIVLFATTDKSKKHKGISA 200

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
           +L D    GL   + ++K+G R ++T  L F +     +   N    P    KI ++ LD
Sbjct: 201 ILVDSPTAGLSLGKKEDKLGIRGSSTCSLIFEDC---QMPQDNTLGKPGMGFKIAMMTLD 257

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++G  + +A+A     + YA +R   G  +I    +++ IAD+AL + ++  L++
Sbjct: 258 AGRIGIAGQALGIAQASLDCAMDYANKRQAFGQSIIKLQTIQQKIADMALKLESSRLLTW 317

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    RHY
Sbjct: 318 RAAQLKDSGKPYTKEAAMAKLSASETATFCAH-------QCIQILGGMGYVSDMPAERHY 370

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 371 RDARITEIYEGT 382


>gi|167570773|ref|ZP_02363647.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 596

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 69/405 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSSYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   V 
Sbjct: 348 LATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           +  ++  GG G+IEE   A++YR++   +I  G+     +   +L+ + T          
Sbjct: 408 SLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKTV--------- 455

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
            +D G+  K ++  +R ++       G A F   K  LA+ A AL
Sbjct: 456 -RDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKTQLANGARAL 498


>gi|320588653|gb|EFX01121.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera
           kw1407]
          Length = 609

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 129/306 (42%), Gaps = 64/306 (20%)

Query: 199 GLGLTEKRGGTDIA---------AITSQGQKISD------GIYCLSGHKWFLSSPMSDAF 243
           G  +TE+ GG+D++           T+ G    D      G + + G KWF S+  +   
Sbjct: 189 GQWMTERPGGSDVSQTETVATYVGATAGGDDDVDANGDPLGPWAIDGFKWFSSATDAGMA 248

Query: 244 IMLAQVEGRVG--CFLVP--RLLEDGSP------------NGLCYQRLKNKIGNRSNATV 287
           I+LA+     G   F  P  R     SP            NG+  QRLK+K G R   T 
Sbjct: 249 ILLARTHSSKGLSAFFAPMRRRRRASSPATAMAGPNNTELNGVRIQRLKDKFGTRPVPTA 308

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           ELE   T  +L+G        +  M  +  ++   A + ++G  + +A+A  YA  RHVS
Sbjct: 309 ELELRGTRAWLIGREGDGIREIATMLAITRVHCSVACLGLAGRALGVAKA--YALVRHVS 366

Query: 346 GG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           GG        L   P+  R +AD+  +      L+   A                 IM  
Sbjct: 367 GGPGGRSRMPLYKSPLHMRTLADLTGEYHGMMLLTMYTAY----------------IMGS 410

Query: 399 ITKYWCCKMA-PAVIAEAMECIGGSGYI-----EERSIARHYRESPANSILLGSGNAMVL 452
           + K +CCK A P +    ME +GG GY+     E  ++AR +R+   N+I  G+ + +  
Sbjct: 411 LHKAYCCKQAVPLLHGACMEALGGVGYLLNHETEPLNLARLFRDGCVNAIWEGTTDVLST 470

Query: 453 DVLNLL 458
           D+L  L
Sbjct: 471 DLLRTL 476


>gi|224367888|ref|YP_002602051.1| Acd1 [Desulfobacterium autotrophicum HRM2]
 gi|223690604|gb|ACN13887.1| Acd1 [Desulfobacterium autotrophicum HRM2]
          Length = 615

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 43/322 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+   K  DG Y ++G+K F+++    ++D  I  +LA++EG     
Sbjct: 164 LTEPSAGSDLGALTTTATKNDDGTYSITGNKIFITNGEQNLTDNIIHPVLARIEGAPAGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             +  F+VP++   EDGS    N +    ++ K+G   + T  L   +     GFLLG  
Sbjct: 224 RGISIFIVPKIWVNEDGSFGESNDVVCTGVEEKMGLHGSPTCSLSLGSKGQCRGFLLGKE 283

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LI 350
           N     +  M   + L+    + +    +   A+ YAR R     +            +I
Sbjct: 284 NQGMQIMFHMMNEVRLEVGTQAATHASCAYLYALDYARTRCQGRSLETSRDSSAPQVPII 343

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAY---ARIMAPITKYWC 404
             P ++R +  +   +    +L +  A   D+   A +++E+  Y     I+ PI K +C
Sbjct: 344 QHPDVRRMLTKMKAHVEGMRSLLYYTAFCIDKGHCADTQAEKDRYQGLTEILTPIVKAYC 403

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
            +    V  +AM+  GG GY  E  + +  R+    SI  G+     +D L     + KG
Sbjct: 404 SERGFDVCVDAMQVFGGYGYTREYPMEQLVRDCKICSIYEGANGIQAMDFLGRKLTMAKG 463

Query: 462 ---TNLFEQLFSTLEQDLGSSG 480
              T+L E++  T ++ + + G
Sbjct: 464 AFLTSLVEEIKKTGQRAMETEG 485


>gi|295697021|ref|YP_003590259.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295412623|gb|ADG07115.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 381

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 12/255 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE   G+D+AAI ++  +  DG Y LSG+K F+++ + +D +++ A+     G   V
Sbjct: 123 LAITEPGAGSDVAAIRTKAVREGDG-YVLSGNKIFITNGVYADFYVVAAKTNPEAGHRGV 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              + D    G   QR   K+G+ ++ T EL F +       LLG+ N     V      
Sbjct: 182 SLFIVDRDAPGFHVQRKLEKVGHHASDTAELFFDDCRIPADRLLGEENRGFYLVMQNFQW 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ ++   + +L  A+ YA+ R   GG L    V++  + D+A+++  A  L++ 
Sbjct: 242 ERLMIALQTLGTAQAALDMAVEYAKTRQQFGGPLTQFQVIRHRLVDMAVEVEKARQLTYH 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
             + +        E + A++ A  T    CK+A     EA++  GG GY+ E  I R +R
Sbjct: 302 ALDLYARGIDAVAETSMAKLTATET---ACKVAD----EALQIHGGYGYMNEYPIQRAWR 354

Query: 436 ESPANSILLGSGNAM 450
           +     I  G+   M
Sbjct: 355 DMRVTRIYGGTSEIM 369


>gi|11498631|ref|NP_069859.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304]
 gi|2649568|gb|AAB90217.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304]
          Length = 397

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 33/273 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K         TE + G+D+A I ++  K  D  Y ++G K F+++  ++D +I+LA+
Sbjct: 113 PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDE-YVINGTKMFITNGSIADYYIVLAR 171

Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            +         +  FLV R  E     G+   +LKNK+G R+N T E+ F N       L
Sbjct: 172 TDPNPPKRHHGMSVFLVERERE-----GVQANKLKNKLGIRANDTAEVVFKNVRVPKENL 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           +G+           + +I+ +   + V+   V LA+     A HYAR R V    L D  
Sbjct: 227 IGEEGKGF-----YQTMIFFNVTRIPVAFQAVGLAQGAFELAYHYARNREVFERKLADFQ 281

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           V +  +A +  ++ AA  L+++ A  F +     +       +  + KY+  K A  ++ 
Sbjct: 282 VTQEKLAKMRTELEAARLLAYQAA-YFQDKMGMPDPG-----LTAMAKYYTAKAAQFIVN 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           EA++  GG G++ E+ I+R YR+     I  G+
Sbjct: 336 EALQIHGGYGFMGEQHISRMYRDVRILEIYEGT 368


>gi|328544858|ref|YP_004304967.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414600|gb|ADZ71663.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 598

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL    T  +   + P + +  +  T             + LTE   GT
Sbjct: 126 MYPGLTAGAVAALTLHGTDALKAKYLPNMIAGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++    +DG Y ++G K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGLIRTRAVSQADGSYRITGTKIFISAGDHDLSENIIHLVLARIEGAPEGTKGISLFVV 232

Query: 259 P-RLLED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P RL+ D    G+ NG+    +++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKRLVGDDGSLGAANGVSCGSIEHKMGIHGNATCVMNYDGATGWLVGEENKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIAD 361
               L  A+  ++   V+   A+ YAR R     +SG          +I  P ++R +  
Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVAYARDRLQGRALSGPKAPDKAADPIIVHPDIRRILMQ 352

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + AA      TAL   +A   D+AK+R++      +M P+ K        A    A
Sbjct: 353 IRAFNEAARALVLWTALHGDVARRSDDAKTRAQAEDMMGLMTPVLKGVLTDTGFANAVNA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI E  + +  R++    I  G+     LD++ 
Sbjct: 413 QQVFGGHGYIAEWGMEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|149201324|ref|ZP_01878299.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035]
 gi|149145657|gb|EDM33683.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035]
          Length = 592

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 143/330 (43%), Gaps = 46/330 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   GTD+  + ++ +   DG Y L+G K F+SS    M+D  I  +LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQGDGSYKLTGQKIFISSGEHDMADNIIHLVLAKIPGGPE 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    NG+   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFIVKEDGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351
                +  M     +   +  ++   V+   A+ YA+     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARIGVGMQGLAQAEVAYQNALAYAKDRLQGRAVTGTENPNGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R++ D    I  A A     A   D +   ++ AA   I  M P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFIEGARAFMLWGAELIDRSHRGNDAAAEGLISLMTPVIKGFLTDEGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +   A +  GG GYIEE  +++  R++    I  G+     LD++              
Sbjct: 401 DMTVLAQQIYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499
             L QD    GK V+       +  KE++G
Sbjct: 448 RKLAQD---GGKHVMAFFELVKTFLKENEG 474


>gi|237813278|ref|YP_002897729.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|237505187|gb|ACQ97505.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 596

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 179/407 (43%), Gaps = 73/407 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V +  ++  GG G+IEE   A++YR++   +I  G+     +   +L+ + T        
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKT-------- 454

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
              +D G+  K +I  +R +        G A F   K  L S A AL
Sbjct: 455 --ARDGGAVAKALIGEIRQTAEALGAHDGPA-FTAMKTQLESGARAL 498


>gi|172061680|ref|YP_001809332.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171994197|gb|ACB65116.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 595

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 47/322 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+L+G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++  N I  G+ +   LD+L
Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453


>gi|167563609|ref|ZP_02356525.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 596

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 69/405 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   V 
Sbjct: 348 LATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           +  ++  GG G+IEE   A++YR++   +I  G+     +   +L+ + T          
Sbjct: 408 SLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKTV--------- 455

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
            +D G+  K ++  +R ++       G A F   K  LA+ A AL
Sbjct: 456 -RDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKTQLANGARAL 498


>gi|108756925|ref|YP_632837.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460805|gb|ABF85990.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 614

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/415 (21%), Positives = 180/415 (43%), Gaps = 76/415 (18%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLE-------AGHLMSPSVT--SASMVALMTTPR 169
           ++++ F+ V     H  + + + L   +E       +   M P +   +A +VA   TP 
Sbjct: 89  LYEQGFKTVGVSPEHGGQGSPMMLQVTVEELLSGANSAFNMYPGLAFGAAEVVAECGTPE 148

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K +  ++ +  +  T             + LTE   G+D+ A  S  ++  DG Y + 
Sbjct: 149 QQKQFVERMLNGTWGGT-------------MCLTEPHAGSDVGAAKSTARRNGDGTYNIR 195

Query: 230 GHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQ 273
           G K F+S    D       ++LA+++G       +  F+VP+L        G PN +   
Sbjct: 196 GTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRINADGSSGQPNDVGVG 255

Query: 274 RLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G   +AT  + F    N  G L+G +      V   ++   ++ A ++V    +
Sbjct: 256 SIEHKMGINGSATCVINFGESDNCVGELVGTVE----HVGMSQMFKMMNGARIAVGIQGI 311

Query: 331 SLA-----EAIHYARRRHVSG------------GILIDQPVMKRAIADIALDIAAATALS 373
            LA      A+ YA+ R                  +I+ P ++R + DI   +    +L 
Sbjct: 312 GLASAAYYNALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDIKAHVEGIRSLI 371

Query: 374 FRLANSFDEAK---SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            +LA   D+A+    + ++AA        ++ P+ K +  + A  + A+A++  GG+GYI
Sbjct: 372 IKLAMHLDKARQLAGKDDDAATYHKGQVELLTPLVKAYSSEQAFRLCAQAIQIYGGAGYI 431

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478
           ++  + ++ R+S   SI  G+ +   +D++   + + G   F+Q       D+GS
Sbjct: 432 QDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMG----DVGS 482


>gi|84514409|ref|ZP_01001773.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84511460|gb|EAQ07913.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 592

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 36/315 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  + ++     DG Y +SG K F+S+   D       ++LA+++G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQDDGSYKISGQKIFISAGDHDLAENIIHLVLAKIQGGPD 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+++  +DGS    NG+   +++ K+G   NAT  + + +  GFL+G+ +
Sbjct: 221 GIKGVSLFIVPKIMVNDDGSLGARNGVSVGKIEEKMGIHGNATCVMNYDDATGFLVGEAH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGG--------ILID 351
                +  M     L   +   +    +   A+ YA    + R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQAESAYQNAVAYANDRLQGRAVTGAENPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R + D    +  A A ++  A   D A   S++ A   I  M P+ K +      
Sbjct: 341 HPDIRRNLMDQKSFVEGARAFTYWGAYLIDRAHRNSDKDADGLISLMTPVIKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL-- 464
                A +  GG GYIEE  ++++ R++    I  G+     LD++     L+ G ++  
Sbjct: 401 EYATAAQQVYGGHGYIEEWGMSQYARDARIAMIYEGANGIQALDLVGRKLALDGGKHVMA 460

Query: 465 -FEQLFSTLEQDLGS 478
            FE + + ++++ G+
Sbjct: 461 FFEMIKTFIKENEGN 475


>gi|146278328|ref|YP_001168487.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556569|gb|ABP71182.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 591

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 155/385 (40%), Gaps = 58/385 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M   +T  +  A+ T  T    + W PK+ + ++  T             + LTE   GT
Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVTCDWTGT-------------MNLTEPHAGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + ++ +   DG Y ++G K F+S+   D       ++LA+  G       V  F+V
Sbjct: 171 DLGMMRTKAEPQEDGSYLITGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  EDGS    N +   ++++K+G   NAT  L +    G+LLG+L+     +  M 
Sbjct: 231 PKYLVNEDGSLGDRNHVSVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361
               L   +   +    +   A+ YAR     R +SG          LI  P ++R + D
Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQATTAGAADPLIVHPDIRRNLMD 350

Query: 362 IALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
               +  A AL+F  A   D +     +E      ++ P+ K +           A +  
Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRLGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY+EE  +++  R++    I  G+     LD++                L  D G  
Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG-------------RKLAADGGKP 457

Query: 480 GKKVITILRDSISLCKEDKGLARFL 504
                 ++R  +   +ED  L  FL
Sbjct: 458 AMAFFHMIRAFLKENEEDARLKGFL 482


>gi|307730602|ref|YP_003907826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307585137|gb|ADN58535.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 596

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 158/327 (48%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +  +DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAEPQADGSFKLFGTKIFITWGEHDMAANIAHLVLARTPSAPEGVKGISLFIV 230

Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
           P+ L +  P+G   +R       +++K+G +++ T  L+F +     G L+G+ N     
Sbjct: 231 PKFLVN--PDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG--- 285

Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356
           +E M I++      + + G+ VS     +A+ YA+ R  S  +         +I+ P ++
Sbjct: 286 LEYMFIMMNAARFAVGMQGVGVSDRAYQKAVAYAKERVQSRPVDGSSKQPVPIIEHPDVR 345

Query: 357 RAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R ++ +     A+ AL++       +A+   +A  R+E  A    + PI K W  +++  
Sbjct: 346 RMLSTMRALTEASRALAYVAAAHSDIAHRHPDAGKRAEHQAINEFLVPIVKGWSTELSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A++YR++
Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|260576256|ref|ZP_05844248.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259021524|gb|EEW24828.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 567

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 41/345 (11%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T   + AL    +P +   + PK+ S ++  T             + LTE + G+
Sbjct: 124 LNPLLTQGQIEALEHHASPEIKALYLPKLISGDWCGT-------------MNLTESQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+ A+ ++ +  +DG Y ++G K F+S   +D       ++LA++         +  FLV
Sbjct: 171 DVGALRAKAEPNADGTYAVTGQKIFISWADADFAANICHLVLARLPDAAPGTRGISLFLV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D     G+ N L    L++K+G   + T  +++    G+L+G  +     +  M 
Sbjct: 231 PKFIPDAAGNPGARNSLSVVSLEHKMGLHGSPTAVMQYDAAKGWLIGAPHKGMAAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSG-GILIDQPVMKRAIADIALDIA 367
               L   +  ++    +   A+ YA  R      V G G +ID   ++R +  +  +I 
Sbjct: 291 NNARLGVGVQGIAAAEGAYQLALDYAMDRKQGKTPVPGAGAIIDHADVRRMLVQMRAEIF 350

Query: 368 AATALSFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           AA A++   A + D A++   ++  A A ++ PI K         V +  ++  GG G+I
Sbjct: 351 AARAIALSCAVATDMARATGSADWQARAALLTPIAKACGTDTGVNVASLGVQVHGGMGFI 410

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
           EE   A++ R+    +I  G+     +D++   L + G   F  L
Sbjct: 411 EETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLADGGEAAFRLL 455


>gi|300705170|ref|YP_003746773.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299072834|emb|CBJ44190.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
          Length = 595

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225

Query: 253 --VGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N  
Sbjct: 226 KGISLFVVPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   +  +    V+   +  YA+ R     +SG    D+P        
Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + +RA A+     A   AL      S  +  +R E A    ++ P+ K +    
Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESARKEAADLVALLTPVIKAFLTDN 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D+G+  KK   I++D +      + +  F+ 
Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490


>gi|73542233|ref|YP_296753.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119646|gb|AAZ61909.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 594

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +      + PK+   E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDEQKATFLPKLICGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N      +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNADGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNSARFAVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVKRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVI 412
           +  +   I  A ++++  A + D A + ++EA      A    + PI K W  +++  V 
Sbjct: 348 LMTMRGLIEGARSVAYVAAATCDAAHNHADEAVRTKNQALYEFLVPIVKGWSTELSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A+HYR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|85706101|ref|ZP_01037196.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85669265|gb|EAQ24131.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 582

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   GTD+  + S+ +   DG Y ++G K F+SS    M+D  I  +LA++ G   
Sbjct: 151 MNLTEPHCGTDLGLMRSKAEPQGDGSYKITGQKIFISSGEHDMADNIIHLVLAKIPGGPE 210

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    NG+   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 211 GIKGVSLFIVPKFIVKEDGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEH 270

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG--------ILID 351
                +  M     +   +  ++   V+   A+ YA+     R V+G          LI 
Sbjct: 271 KGMRAMFTMMNEARIGVGMQGLAQAEVAYQNALAYAKDRLQGRAVTGAENPNGPADPLIV 330

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R++ D    I  A A     A   D +    + AA   I  M P+ K +      
Sbjct: 331 HPDIRRSLMDQKSFIEGARAFMLWGAELIDRSHRGDDAAAEGLISLMTPVIKGFLTDEGY 390

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +   A +  GG GYIEE  +++  R++    I  G+     LD++              
Sbjct: 391 DMTVLAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 437

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499
             L QD    GK V+       +  KE++G
Sbjct: 438 RKLAQD---GGKHVMAFFDLVKTFLKENEG 464


>gi|297617070|ref|YP_003702229.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144907|gb|ADI01664.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 31/275 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-----EGRV 253
             +TE   G+D ++I ++ +   D  + L G K F + +P +D +I++A+        R 
Sbjct: 123 FAMTEPWAGSDASSIRTRCRLEGDE-WVLDGTKLFTTNAPYADIYIVMARTGSADDRHRN 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
            C LV   +E GSP G  + R  +K+G R +AT +L F N       LLG   V  G   
Sbjct: 182 TCALV---VEKGSP-GFTFGRQDDKMGIRGSATCQLVFDNCRIPRENLLG--QVGEGFAI 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALD 365
            M+ L   D   + V+   V +A+A +    R+    I  ++P+     ++  +AD+A  
Sbjct: 236 AMRTL---DGGRIGVAAQAVGIAQAAYEYALRYAKERIQFEKPIATFQAIQFKLADMATR 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+++ A   +     S+E+A+A++ A     W       V  EA++ +GG GYI
Sbjct: 293 IEAARLLTYQAAWLQENGFPYSKESAFAKVFAGDVAMW-------VTTEAVQVLGGHGYI 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  + R+ R++    I  G+     + + N + K
Sbjct: 346 KDHPVERYMRDAKITQIYEGTAEVQKMVIANHILK 380


>gi|313498919|gb|ADR60285.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 592

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 36/315 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +   A  + LTE   GTD+  I ++ Q ++DG Y +SG K F++    D       +
Sbjct: 154 PMYQGRWAGSMCLTEPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP++L D     G  N +    +++K+G +++AT  + F  
Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDADGVLGEANAVSCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI-- 348
             G+L+G+ N     +  M     L   I  ++    S   AI YAR R       G+  
Sbjct: 274 AIGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEA 333

Query: 349 -------LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
                  +I  P ++R      A+ +     +   AL   +A   D+  +R+   A   +
Sbjct: 334 PSQYADPIIVHPDVRRMLLTMKALNEGGRAFSTYVALQLDMAKYSDDPATRANAEAKVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +   M         + +GG GYI E    +  R+     I  G+     LD++
Sbjct: 394 LTPVAKAFLTDMGLETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453

Query: 456 N--LLEKGTNLFEQL 468
              LL  G   +  L
Sbjct: 454 GRKLLGDGGKAYRGL 468


>gi|148547881|ref|YP_001267983.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511939|gb|ABQ78799.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 592

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +   A  + LTE   GTD+  I ++ Q ++DG Y +SG K F++    D       +
Sbjct: 154 PMYQGRWAGSMCLTEPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP++L D     G  N +    +++K+G +++AT  + F  
Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDVDGVLGEANAVSCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----------- 342
             G+L+G+ N     +  M     L   I  ++    S   AI YAR R           
Sbjct: 274 AIGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEA 333

Query: 343 -HVSGGILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
              S   +I  P ++R      A+ +     +   AL   LA   D+  +R+   A   +
Sbjct: 334 PSQSADPIIVHPDVRRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDPATRANAEAKVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +   M         + +GG GYI E    +  R+     I  G+     LD++
Sbjct: 394 LTPVAKAFLTDMGLETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|170699188|ref|ZP_02890241.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170135913|gb|EDT04188.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 595

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 47/322 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQRQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++  N I  G+ +   LD+L
Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453


>gi|332557636|ref|ZP_08411958.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides WS8N]
 gi|332275348|gb|EGJ20663.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides WS8N]
          Length = 591

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 45/337 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M   +T  +  A+ T  T    + W PK+ S ++  T             + LTE   GT
Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDWTGT-------------MNLTEPHAGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + ++ +   DG Y ++G K F+S+   D       ++LA+  G       V  F+V
Sbjct: 171 DLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +   ++++K+G   NAT  L +    G+LLG+L+     +  M 
Sbjct: 231 PKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L   +   +    +   A+ YAR     R +SG          LI  P ++R + D
Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMD 350

Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
               +  A AL+F  A   D +  +  +E      ++ P+ K +           A +  
Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY+EE  +++  R++    I  G+     LD++ 
Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG 447


>gi|171694311|ref|XP_001912080.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947104|emb|CAP73909.1| unnamed protein product [Podospora anserina S mat+]
          Length = 615

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 57/318 (17%)

Query: 199 GLGLTEKRGGTDIA-----------------AITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           G  +TE+ GG+D++                  + SQ + I  G + +SG KWF S+  S 
Sbjct: 175 GQWMTERTGGSDVSQTETVATYDPFPSSAPVPLASQSESIPLGPWSISGFKWFSSATDSH 234

Query: 242 AFIMLAQVEGRVG--CFLVPRLLEDGSP-------------NGLCYQRLKNKIGNRSNAT 286
             I+LA+     G   F  P   ++ S              NG+  QRLK+K G +S  T
Sbjct: 235 MTILLARTHPSKGVSAFFAPMRRDNPSLVSHTGESGNGTELNGITIQRLKHKFGTQSLPT 294

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            ELE     G+L+G+       +  +  +  + + + S+  +  SL  A  +A  R V  
Sbjct: 295 AELELKGMRGWLIGEEGKGIQEISTILNITRVHTTVSSMGYLGRSLGIARSFALVRPVGM 354

Query: 347 G-----ILIDQPVMKRAIADIALDIAAATALSFRL--ANSFDEAKSRSEEAAYA------ 393
           G      L   P+  R +A++  D      L+F    A   DE    S +AA        
Sbjct: 355 GKGKRIALSSHPLHMRTLANMTTDYHGMMLLTFYTIHALGLDERFLPSNQAATKVPTPPK 414

Query: 394 -------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI-----EERSIARHYRESPANS 441
                  R+++ + K + C+    ++   ME +GG GY+     E  +I+R +R+    +
Sbjct: 415 ELVQPLLRVLSSLHKSYVCETTVPLVYGCMEALGGVGYMQNVESEHLNISRLFRDCCVGA 474

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+ + +  D L  L+
Sbjct: 475 IWEGTTDVLASDTLRALK 492


>gi|15888075|ref|NP_353756.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15155701|gb|AAK86541.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 594

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 166/401 (41%), Gaps = 56/401 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV     W  L RR    G +       F    +   H +  A L +         ++P+
Sbjct: 69  KVTTPDGWADLYRRWAEAGWNSLTAPEEFGG--QNLPHMLNVAALEMWNSGSMAFALAPT 126

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ A++T  +  + + + PK+ S E+  T             + LTE   G+D+  
Sbjct: 127 LTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGT-------------MNLTEPHAGSDLGV 173

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL 262
           + ++ ++  DG Y + G K F++    DA      ++LA++         +  FLVP+ L
Sbjct: 174 LKTRAERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFL 233

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPV 309
            D     GS N L    L++K+G   + T  + F +          G+L+G+ N     +
Sbjct: 234 PDENGAPGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACM 293

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--------HVSG-GILIDQPVMKRAIA 360
             M     L   +  V+    +  +AI YA+ R          SG   +I+ P + R + 
Sbjct: 294 FTMMNNARLAVGMQGVAICEAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLL 353

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +      + A+SF  A++ D      +A  R+     A ++ PI K +       V + 
Sbjct: 354 TMKALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASM 413

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            ++  GG G+IEE   AR+ R++    I  G+     +D++
Sbjct: 414 GIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLV 454


>gi|300692520|ref|YP_003753515.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           PSI07]
 gi|299079580|emb|CBJ52258.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
          Length = 595

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 49/339 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+    +S+  I L         A  
Sbjct: 166 LTEPHCGTDLGILRTKAEPLADGAYAITGTKIFISAGEHDLSENIIHLVLARLPDAPAGT 225

Query: 250 EGRVGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ + D  G+P   NG     +++K+G   NAT  +      G+++G+ N 
Sbjct: 226 KG-ISLFVVPKFIPDAAGNPGERNGAKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNK 284

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353
               +  M     L   +  +    V+   +  YA+ R     +SG    D+P       
Sbjct: 285 GLNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVH 344

Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                  + +RA A+     A   AL      S  +   R E A    ++ P+ K +   
Sbjct: 345 PDVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDEAQRKEAADLVALLTPVIKAFLTD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L           
Sbjct: 405 NAFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG---------- 454

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
                +  D+G+  KK   I++D +     ++ +  F+ 
Sbjct: 455 ---RKILGDMGAKMKKFGKIVQDFVEAEGTNEAMQEFIN 490


>gi|45656441|ref|YP_000527.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599676|gb|AAS69164.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 571

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 188/463 (40%), Gaps = 75/463 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KVEF P    L+ + I  G+    + R +  +      K   + ++         +    
Sbjct: 85  KVEFPPKMLELVSKVIEAGVQAYGFSRKYGGLGIPWTVKSFISEIFYRVDASLA-IAIGC 143

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V  A ++    T ++  DW P     ++                +GLTE   G+D++ + 
Sbjct: 144 VNLAEILERHATEQMKSDWIPHFADGKF-------------VCAMGLTEPDHGSDLSNLR 190

Query: 216 SQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-------FLVPRLLE 263
           ++  K  +G + L+G K F++       +    + LA+  G +         FLV     
Sbjct: 191 TKATKDKNGNWTLNGTKRFITHGCGFGDLPAVLLTLAR-SGEINSGARGLSFFLV----- 244

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LD 319
                 +    ++NK+G   + T E+ F N+ G L+G+        E   ++ Y    L+
Sbjct: 245 --QSTDVQIAGIENKLGLHCSPTCEVVFENSPGLLIGE--------EGYGLIKYTMGMLN 294

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            A M ++     LA     EA+ YA+ R   G  LI+ P +K+ +  I  +  A   L+ 
Sbjct: 295 GARMGIAQQSTGLATAAYYEALKYAKERTQFGKTLIEIPAVKKILDQIERETYAMRCLTL 354

Query: 375 RLANSFD---------EAKSRSEEA-----------AYARIMAPITKYWCCKMAPAVIAE 414
             +   D         E +  +E+              A I+ PI+K++C +     +++
Sbjct: 355 EGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRYWEKIANILTPISKFYCSESCLKTVSD 414

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-TNLFEQLFSTLE 473
           A++  GGSGY E+  I+R YR++   +I  G+    +   +  +  G T+ F +  S L 
Sbjct: 415 ALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQIQINACIGGITSGLTHTFGEYVSELI 474

Query: 474 QDLGSS-GKKVITILRDSISLCKE--DKGLARFLTEKIALASS 513
               SS   K+    ++ + L KE  +K +     E+I L  S
Sbjct: 475 SRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIYAEEIVLTCS 517


>gi|167841030|ref|ZP_02467714.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 596

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 180/407 (44%), Gaps = 73/407 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ +  +  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLIAGVWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAECAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + PI K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPIVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V +  ++  GG G+IEE   A++YR++   +I  G+     +   +L+ + T        
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKT-------- 454

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
              +D G+  K ++  +R ++       G A F   K+ L + A AL
Sbjct: 455 --ARDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKVQLENGARAL 498


>gi|171317326|ref|ZP_02906522.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097525|gb|EDT42363.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 595

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 47/322 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++  N I  G+ +   LD+L
Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453


>gi|126732007|ref|ZP_01747810.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
 gi|126707539|gb|EBA06602.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
          Length = 593

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE   GTD+  + ++ +   DG + ++G K F+S+    MSD  +  +LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQDDGSHKITGQKIFISAGDHDMSDNVVHLVLAKIPGGPD 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L  EDGS    N +   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFLVNEDGSLGDRNAVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEAH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351
                +  M     L   +   +   V+   A+ YA+ R     V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQAEVAYQNALAYAKDRLQGRDVTGAKNPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++R++ D    +  A A  +  A   D A   S++ A   I  M P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFVEGARAFVYWGAAMIDRAHRNSDKDADGLISLMTPVIKGFLTDRGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +A +  GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 401 DMCTQAQQVYGGHGYIEEWGMSQFARDARIAMIYEGANGVQALDLVG 447


>gi|207727916|ref|YP_002256310.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206591158|emb|CAQ56770.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 595

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 139/338 (41%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ + D     G  NG+    +++K+G   NAT  +      G+++G+ N  
Sbjct: 226 KGISLFVVPKFIPDAGGKPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   +  +    V+   +  YA+ R     +SG    D+P        
Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + +RA A+     A   AL      S  +  +R E A    ++ P+ K +    
Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESARKEAADLVALLTPVIKAFLTDN 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D+G+  KK   I++D +      + +  F+ 
Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490


>gi|325521384|gb|EGD00224.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia sp. TJI49]
          Length = 595

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 47/322 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271
           +SG K F+SS    MS   I L         Q    +  F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++  N I  G+ +   LD+L
Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453


>gi|126461643|ref|YP_001042757.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126103307|gb|ABN75985.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 591

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 45/337 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M   +T  +  A+ T  T    + W PK+ S ++  T             + LTE   GT
Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDWTGT-------------MNLTEPHAGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + ++ +   DG Y ++G K F+S+   D       ++LA+  G       V  F+V
Sbjct: 171 DLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +   ++++K+G   NAT  L +    G+LLG+L+     +  M 
Sbjct: 231 PKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L   +   +    +   A+ YAR     R +SG          LI  P ++R + D
Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMD 350

Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
               +  A AL+F  A   D +  +  +E      ++ P+ K +           A +  
Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY+EE  +++  R++    I  G+     LD++ 
Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG 447


>gi|78067517|ref|YP_370286.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383]
 gi|77968262|gb|ABB09642.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
          Length = 599

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 57/327 (17%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + K + PK+ + E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 149 PELQKAYLPKLVTGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 195

Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED--GSP---NGLC 271
           +SG K F+SS    M++  I L         Q    +  F+VP+ + D  G+P   NG+ 
Sbjct: 196 ISGTKIFISSGEHDMAENIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGAPGERNGIK 255

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N          + + +++A + V    + 
Sbjct: 256 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLN-----AMFVMMNAARLGVGAQGLG 310

Query: 332 LAE-----AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAA 368
           L E     ++ YA+ R     ++G    D+P              + ++A A+ A     
Sbjct: 311 LTEVAYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTY 370

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            +AL      S  +   R E A    ++ PI K +    A      AM+  GG G+I E 
Sbjct: 371 WSALQIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEW 430

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
            + ++ R++  N I  G+ +   LD+L
Sbjct: 431 GMEQYVRDARINMIYEGTNSIQSLDLL 457


>gi|55378707|ref|YP_136557.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55231432|gb|AAV46851.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 379

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 144/308 (46%), Gaps = 55/308 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           +SM+       + + W PKI S E              A    ++E   G+++A I +  
Sbjct: 94  SSMIQKYGDEWMKEKWLPKITSGES-------------ACASAISEPAHGSNVAGIETYA 140

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
           ++ SDG + L+G+K W  +  ++D  +++A+ +   G      FLVP        +GL  
Sbjct: 141 ERDSDG-WVLNGNKMWITNGTVADVMVVMAKTDPDAGHEGISAFLVPT-----DTDGLQA 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIM 323
           +++ NK+G R++   E+        ++ D+ V   P E++         +++ +  S   
Sbjct: 195 EKIDNKLGIRASDLAEI--------IIDDVRV---PEENLIGEAGAGFYQLMDFFASGRA 243

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +V+   V  A+A     I YA  R   G  + +   ++  +A++A ++ AA +L++R A+
Sbjct: 244 NVAAQAVGTAQAAIDDSIEYANEREQFGQPISEFQAIEHKVAEMATNVEAARSLTYRAAS 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D     S     A  +  + K +  + A  V  EA++  GG+GY+ + ++ R+YR++ 
Sbjct: 304 AID-----SGNLDVATKLTSMAKLFASEHAVDVADEAIQVHGGAGYVTDHNVERYYRDAR 358

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 359 ITKIYEGT 366


>gi|260429527|ref|ZP_05783504.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45]
 gi|260420150|gb|EEX13403.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45]
          Length = 568

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 49/354 (13%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +T   + AL    +  +   + PK+ S E+  T             + LTE + G+
Sbjct: 126 LNPLLTQGQIEALEHHASDEIKALYLPKLISGEWSGT-------------MNLTEPQAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+ A++S+     DG Y ++G K F+S   +D       ++LA++ G       +  F+V
Sbjct: 173 DVGALSSRADDNGDGTYAITGQKIFISWGDADFVENVCHLVLARLPGAPAGTKGISLFMV 232

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D  G+P   N L    L++K+G   + T  + +    G+++G       P   MK
Sbjct: 233 PKFIPDAAGNPGVANSLKVVSLEHKMGLHGSPTCVMSYEGATGWMIG------APGSGMK 286

Query: 314 -ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG---ILIDQPVMKRAIADIAL 364
            +   +++A + V G  V  AE     A+ +A  R         +I    ++R +A +  
Sbjct: 287 AMFTMMNNARLGVGGQGVGAAEGAYQHALAFANERKQGKSPFDTIIGHADVRRMLATMKA 346

Query: 365 DIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +I AA A++   A S D   A   +E  A A  + PI K +   +   V    ++  GG 
Sbjct: 347 EIFAARAIALDCAISIDMGRATGEAEWDARAAFLTPIAKAFGTDIGCEVSEMGVQVHGGM 406

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLEQD 475
           GY+EE   A+ YR+    +I  G+     +D++   L  G     +L   +E D
Sbjct: 407 GYVEESGAAQFYRDVRVTAIYEGTNGIQAMDMVGRKLMDGGEAAARLLDEIEAD 460


>gi|187924959|ref|YP_001896601.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187716153|gb|ACD17377.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 596

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ +S     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVGISDRAYQKAVAYAKDRVQSRPVDGSAKQSVAIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           ++ +     A+ AL++  A          DEAK R+E  A    + PI K W  +++  V
Sbjct: 348 LSTMRGLTEASRALAYVAAAHCDIAHRHPDEAK-RAEHQAIYEYLVPIVKGWSTELSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|288960818|ref|YP_003451158.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913126|dbj|BAI74614.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 598

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 57/415 (13%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251
           A  + LTE + G+D+ A+ ++     DG + L G K F++    D       ++LA+  G
Sbjct: 160 AATMNLTEPQAGSDVGALRTRAVPQPDGTHRLFGQKIFITYGDHDLTENIIHLVLARTPG 219

Query: 252 R------VGCFLVPRLL-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT----FGF 297
                  V  FLVP+ L EDG P   N +    +++K+GN  + T  + +        G+
Sbjct: 220 APEGSKGVSLFLVPKFLPEDGWPGRRNDVYCAGIEHKMGNHGSPTCTMVYGGNGEGAVGW 279

Query: 298 LLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----L 349
           L+G  N         V   + ++  +   MS    + +LA A    + R   GG     +
Sbjct: 280 LVGAENKGLQTMFVMVNSARFVVGQEGTAMSERAYQQALAYARERVQGRLAKGGTASVPI 339

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403
           I  P ++R +  +     A  A+++ +A + D A        R E  A+  +M PI K W
Sbjct: 340 IRHPDVRRMLLSMRSQTEAMRAVAYAIAGARDLASRHPDPEIRRERQAFVNLMIPIFKGW 399

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
             + A  V + +++  GG GY+ E  +++  R+   +SI  G+ +    D+++     + 
Sbjct: 400 ASETAVEVTSTSIQVHGGMGYVLESGVSQPLRDVRVSSIYEGTTSIQAHDLVDRKLARDG 459

Query: 461 GTNL---FEQLFSTLEQDLGSSGKK----VITILRDSISLCK--EDKGLARFLTEKIALA 511
           G  L     Q+  TL Q LG  G+     + T LR ++   +   D+ LA +  +   + 
Sbjct: 460 GAALRAWLSQVHLTLRQ-LGDGGRDEFAVIQTNLRKAVDALQGAADRVLAEYERQPQEVL 518

Query: 512 SSAAALYR-----AGMNDIADVFL-ENRFLDNCHST-----HCMLHGRFNAAHII 555
           + A    R     AG   +A   L   R LD            +L  RF A H++
Sbjct: 519 AGAVPFLRLCGVVAGGWQMARAALAAGRQLDRREGNADFLRRKLLSARFYATHVL 573


>gi|114797077|ref|YP_760546.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114737251|gb|ABI75376.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 589

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 44/318 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y ++G K ++
Sbjct: 150 PKLVSGEWTGT-------------MNLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYI 196

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNK 278
           +     M++  I L         A  +G +  FLVP+ +   DG+P   NG+    L+ K
Sbjct: 197 TWGDHDMAENIIHLVLARLPDAPAGSKG-ISLFLVPKFILDADGTPGERNGVRCIGLEKK 255

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   + T  +E+S   G+L+G+ N     +  M     L+  +  V+    +   A  Y
Sbjct: 256 MGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAY 315

Query: 339 A--RRRHVSGGILIDQPVM-----KRAIADIALDIAAATALSFR------LANSFDEAKS 385
           A  R++  + G+    P++     +R +  +   +AAA A+ +       LA+S  +   
Sbjct: 316 AQERKQGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDV 375

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R+       ++ PI K W   +   V +  ++  GG G++ E   A+ YR++    I  G
Sbjct: 376 RAAAKTREDLLTPIAKAWSTDIGVEVASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEG 435

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     +D++     GT 
Sbjct: 436 TNGIQAIDLVGRKLSGTK 453


>gi|83718689|ref|YP_442192.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167619151|ref|ZP_02387782.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
 gi|257138382|ref|ZP_05586644.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83652514|gb|ABC36577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 596

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + PI K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPIVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|23014717|ref|ZP_00054520.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 546

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 42/282 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS---SPMSDAFIML--------- 246
           + LTE + G+D+AAI S+   + DG  + LSG K F++     ++D  + L         
Sbjct: 162 MNLTEPQAGSDLAAIRSK--AVPDGDKFRLSGQKIFITYGDHDLADNIVHLVLARLPDAP 219

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A V+G +  F+VP++L DGS N L    L++K+G   + T  + F +  G  LG+L    
Sbjct: 220 AGVKG-ISLFVVPKILPDGSRNDLKCVSLEHKLGIHGSPTAVMSFGDHEG-ALGELVGQ- 276

Query: 307 GPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----------HVSGGILI 350
            P   ++ + + ++ A ++V    +++AE     A +YAR R            S GI +
Sbjct: 277 -PHRGLEYMFVMMNHARLAVGLQGLAIAERAYQQARNYARDRVQGKPAGWTGSGSAGI-V 334

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWC 404
             P ++R +  +   I A   + +  A S D      E  +R E       + PI K WC
Sbjct: 335 HHPDVRRLLMTMKSGIEAMRGIHYTAAASADIAHHHPEPNARYEANQRLEFLTPIAKGWC 394

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++   + +  ++  GG GYIEE   A+H R++   +I  G+
Sbjct: 395 TELGQHIASLGVQVHGGMGYIEETGAAQHLRDARITTIYEGT 436


>gi|53720107|ref|YP_109093.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126442296|ref|YP_001059884.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126453376|ref|YP_001067171.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|134277599|ref|ZP_01764314.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167720647|ref|ZP_02403883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167816838|ref|ZP_02448518.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167846744|ref|ZP_02472252.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167895330|ref|ZP_02482732.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167911965|ref|ZP_02499056.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167919957|ref|ZP_02507048.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|242314186|ref|ZP_04813202.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254195643|ref|ZP_04902070.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254295639|ref|ZP_04963097.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|52210521|emb|CAH36504.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126221789|gb|ABN85295.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|126227018|gb|ABN90558.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|134251249|gb|EBA51328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|157805512|gb|EDO82682.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|169652389|gb|EDS85082.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|242137425|gb|EES23827.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 596

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|76811404|ref|YP_334354.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167739633|ref|ZP_02412407.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167825240|ref|ZP_02456711.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167903716|ref|ZP_02490921.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
 gi|217420548|ref|ZP_03452053.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|226197861|ref|ZP_03793435.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254192011|ref|ZP_04898511.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254261810|ref|ZP_04952864.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|76580857|gb|ABA50332.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157987833|gb|EDO95598.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217395960|gb|EEC35977.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|225930049|gb|EEH26062.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254220499|gb|EET09883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 596

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|226943545|ref|YP_002798618.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718472|gb|ACO77643.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 585

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 45/336 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +   +   L    TP + + +   I S E  PT             + LTE + G+
Sbjct: 126 MYPGIAHGAYECLRAHGTPELRERYLADIVSGEILPT-------------MCLTEPQAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  + S+ +  +DG Y LSG K F S    D       ++LA++         +  FLV
Sbjct: 173 DVGLLRSRAEPAADGGYRLSGSKLFASGGEHDLTGNILHLVLARLPDAPPGSRGISLFLV 232

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P+LL DG  N +    +++K+G R +AT  L F +  G+LLG+ +     +  M     L
Sbjct: 233 PKLLPDGRRNAVRCDGIEHKLGIRGSATCTLSFEHAEGWLLGEPHKGLAAMFVMMNSARL 292

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------------LIDQPVMKRAIADIALD 365
              +  +     +   A  YA  R     +             +   P M+R + ++   
Sbjct: 293 HVGLQGLGHAEAAWQNAAQYAAERRQMRAVRRPPGRAEAPADPIHYHPAMRRVLLELRTL 352

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
                AL +  A+  DEA+  ++ A  AR      ++ P+ K +  +    + + A++  
Sbjct: 353 TEGMRALGYWTAHLLDEAEQGADPARRARAQGRAMLLTPLVKAFFTEQGFRLASAALQVF 412

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG GY++E +I +  R+S    I  GS      D+L
Sbjct: 413 GGYGYVQEYAIEQTLRDSRIAMIYEGSNEIQANDLL 448


>gi|254437740|ref|ZP_05051234.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198253186|gb|EDY77500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 591

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 182/438 (41%), Gaps = 74/438 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+ + E+  T             + LTE   GT
Sbjct: 124 MYPGLTHGNISAIVTHGTDAQKAMYLPKMATGEWSGT-------------MNLTEPHCGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + ++ +   DG Y +SG K ++S+   D       ++LA++ G       +  F+V
Sbjct: 171 DLGLMRTKAEPQDDGSYKVSGQKIWISAGEHDLSENIIHLVLAKIPGGPDGVKGISLFIV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + +     G+ N L    L+ K+G   NAT  + +    G+L+G+++     +  M 
Sbjct: 231 PKFIVNADGSLGTRNALSCGGLEEKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMM 290

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L   +   +   V+   A+ +AR     R V+G          +I  P ++R + D
Sbjct: 291 NEARLGVGLQGYAQGAVAYENALGFARDRLQGRAVTGVEEPDKPADPIIVHPDVRRNLMD 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECI 419
               +  A AL++  A   D +    +E A A I  M P+ K +           A + +
Sbjct: 351 QKSFVEGARALTYWGATLMDRSHKNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTL 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GGSG+  E  + +  R++    I  G+     LD++                  + LG +
Sbjct: 411 GGSGFTREWGLEQFVRDARITMIYEGTNGIQALDLVG-----------------RKLGLN 453

Query: 480 GKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDN 537
           G K +    + I +   ++KG A F  + +  L +++  L  AGM           F+ N
Sbjct: 454 GGKTVMAFFEMIKTYIADNKGDAAFEADFLEPLKAASKDLQAAGM----------YFMQN 503

Query: 538 CHSTHCMLHGRFNAAHII 555
             + +  L G ++  H++
Sbjct: 504 MKNPNDALSGSYDFMHMM 521


>gi|83746627|ref|ZP_00943677.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207742321|ref|YP_002258713.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726761|gb|EAP73889.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593711|emb|CAQ60638.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 595

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ + D     G  NG+    +++K+G   NAT  +      G+++G+ N  
Sbjct: 226 KGISLFVVPKFIPDAGGKPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   +  +    V+   +  YA+ R     +SG    D+P        
Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + +RA A+     A   AL      S     +R E A    ++ P+ K +    
Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPNESARKEAADLVALLTPVIKAFLTDN 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D+G+  KK   I++D +      + +  F+ 
Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490


>gi|24216375|ref|NP_713856.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24197657|gb|AAN50874.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 571

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 188/463 (40%), Gaps = 75/463 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KVEF P    L+ + I  G+    + R +  +      K   + ++         +    
Sbjct: 85  KVEFPPKMLELVSKVIEAGVQAYGFSRKYGGLGIPWTVKSFISEIFYRVDASLA-IAIGC 143

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V  A ++    T ++  DW P     ++                +GLTE   G+D++ + 
Sbjct: 144 VNLAEILERHATEQMKSDWIPHFADGKF-------------VCAMGLTEPDHGSDLSNLR 190

Query: 216 SQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-------FLVPRLLE 263
           ++  K  +G + L+G K F++       +    + LA+  G +         FLV     
Sbjct: 191 TKATKDKNGNWTLNGTKRFITHGCGFGDLPAVLLTLAR-SGEINSGARGLSFFLV----- 244

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LD 319
                 +    ++NK+G   + T E+ F N+ G L+G+        E   ++ Y    L+
Sbjct: 245 --QSTDVQIAGIENKLGLHCSPTCEVVFENSPGLLIGE--------EGYGLIKYTMGMLN 294

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            A M ++     LA     EA+ YA+ R   G  LI+ P +K+ +  I  +  A   L+ 
Sbjct: 295 GARMGIAQQSTGLATAAYYEALKYAKERTQFGKTLIEIPAVKKILDRIERETYAMRCLTL 354

Query: 375 RLANSFD---------EAKSRSEEA-----------AYARIMAPITKYWCCKMAPAVIAE 414
             +   D         E +  +E+              A I+ PI+K++C +     +++
Sbjct: 355 EGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRYWEKIANILTPISKFYCSESCLKTVSD 414

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-TNLFEQLFSTLE 473
           A++  GGSGY E+  I+R YR++   +I  G+    +   +  +  G T+ F +  S L 
Sbjct: 415 ALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQIQINACIGGITSGLTHTFGEYVSELI 474

Query: 474 QDLGSS-GKKVITILRDSISLCKE--DKGLARFLTEKIALASS 513
               SS   K+    ++ + L KE  +K +     E+I L  S
Sbjct: 475 SRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIYAEEIVLTCS 517


>gi|224823857|ref|ZP_03696966.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224604312|gb|EEG10486.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 593

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 59/321 (18%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+A + ++     DG Y +SG K F+
Sbjct: 149 PKMASGEWTGT-------------MNLTEPQAGSDLAQVRTRAVPQDDGSYRISGQKIFI 195

Query: 236 SSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLE--DGSP---NGLCYQRLKNK 278
           +    D       ++LA+       V+G +  F+VP+ L   DG+P   N L    L++K
Sbjct: 196 TWGEHDLAENIVHLVLARLPDAPAGVKG-ISLFVVPKFLPGADGTPGARNDLRCVSLEHK 254

Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---L 332
           +G   + T  + F +     G+L+G+ N   G +  M     L    + V GM VS    
Sbjct: 255 LGIHGSPTCVMSFGDQGGAAGYLVGEANKGLGYMFTMMNHARLG---VGVEGMAVSERAY 311

Query: 333 AEAIHYARRR---------HVSGGILIDQPVMKRAIADIALDIAA--------ATALSFR 375
            +A+ YAR R           +G  +I  P ++R +  +   I A        A AL   
Sbjct: 312 QQAVAYARERVQSRAVGSPDAAGVAIIKHPDVRRMLMTMKAQIEAQRALAFVAAAALDRA 371

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
             +   + K+R++  A    + PI K W  + A  + + A++  GG GYIEE  +A++YR
Sbjct: 372 ARHPHPQEKARNQ--ALVNFLIPIVKGWNTEQANEITSLALQVHGGMGYIEETGVAQYYR 429

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           ++   +I  G+     LD++ 
Sbjct: 430 DARITAIYEGTTGIQALDLIG 450


>gi|307244669|ref|ZP_07526772.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678]
 gi|306491920|gb|EFM63970.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678]
          Length = 377

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 16/263 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM         GLTE   G+D A+I +  +K  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMVTGEKLFAFGLTEPGAGSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +G   +   + D    G+ + + +NK+G     T ++   N   +   +LG     
Sbjct: 170 TNPELGVKGISTFVVDSKLEGVSFGKAENKMGMIGCPTSDVVLENVRVSKDCMLG--REG 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  MK L    L  A  ++     ++ EAI YA+ RH  G  +      +  +A++ 
Sbjct: 228 KGFINAMKTLSVGRLGIACQALGLAEGAMEEAIKYAKSRHQFGKSIAKFQNTQFILAEME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             +AA   L +  A   D  ++  +EA+ A++ A     W       +I +A++  GG G
Sbjct: 288 TKLAAMRHLVYDAAYKMDLGQAADKEASMAKLFATEEAKW-------IIDKALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI+E  + R YR+    SI  G+
Sbjct: 341 YIKEYPVERMYRDIRVTSIYEGT 363


>gi|170691427|ref|ZP_02882592.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143632|gb|EDT11795.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 595

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + K + PK+ S  +  T             + LTE   GTD+  + ++ +  SDG Y
Sbjct: 144 TPELQKVYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNDAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +         A A S+  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|94984213|ref|YP_603577.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94554494|gb|ABF44408.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 612

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 159/401 (39%), Gaps = 61/401 (15%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL  + +  +   + PK+ S E+  T             + LTE   GT
Sbjct: 130 MYPGLSHGAYSALSAVGSEELKNLYLPKLVSGEWTGT-------------MCLTEPHAGT 176

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  I ++     DG Y ++G K F+S+   D       ++LA++EG       +  FLV
Sbjct: 177 DLGIIRTKATDNGDGTYAITGTKIFISAGEHDLAENILHLVLARLEGSPMGTKGISLFLV 236

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + +     G  N +    L++K+G   NAT  L F    G+L+G++N     +  M 
Sbjct: 237 PKFIPNADGTLGERNAVVCGSLEHKMGIHGNATAVLNFDGAKGYLVGEINKGMNHMFIMM 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQPVMKRAIADI 362
               L + +  +    V+   A+ YA+ R                 +I  P ++R +   
Sbjct: 297 NAARLGTGLQGLGLGEVAYQNALAYAKERLQMRHEPRVKPSEPADPIIVHPDVRRMLLTG 356

Query: 363 ALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                A  AL+  LA + D      +   R E A    ++ P+ K +           + 
Sbjct: 357 KAYTEAGRALAMWLALNIDLEHHHPDEAGRQEAADLVALLTPVAKAFMTDNGFQTAVLSQ 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +  GG GYI E  + +  R++    I  G+     LD+L                +  D 
Sbjct: 417 QVFGGHGYIREWGMEQFVRDARIGQIYEGTNGIQALDLLG-------------RKVLMDG 463

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
           G   +K+  +L+  +    ED+ LA +L +    AS    L
Sbjct: 464 GKKLQKLAGMLQQFVEENAEDEQLAPYLDQLSKAASQLGTL 504


>gi|307320678|ref|ZP_07600091.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893713|gb|EFN24486.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 598

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 83/416 (19%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   +    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAAPNGDGSYSISGQKIFISAGEHDMAENVVHLVLARIEGAPDGVKGISLFI 231

Query: 258 VPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+       E G  NG+    +++K+G   NAT  + +    G+L+G  N         
Sbjct: 232 VPKFKLDASGEPGERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355
            + + ++ A ++V    +S+AE     A  YAR     R +SG          +I  P +
Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAASYARERIQGRSLSGPKAPDKKADPIIVHPDI 346

Query: 356 KRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I             TAL   +A+  D  + R        +M PI K        
Sbjct: 347 RRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSEEERQTADDILSLMTPILKGVLTDKGF 406

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A +  GG GYIEE  ++++ R++    I  G+     LD++     G  L     
Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAM--- 458

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
                   + G+ V+ + ++    C+E++G      EK++  + A    + G+ND+
Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRG-----DEKLSGYTKA---LKKGLNDL 498


>gi|290968887|ref|ZP_06560424.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781183|gb|EFD93774.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 379

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F+++  S D +I+ A  +   G   +
Sbjct: 123 FGLTEPNAGTDASGQQTVAVK-KDDYYILNGSKVFITNGGSADIYIVFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  + +L++K+G  ++ T+EL F +     +   N+     E  KI ++ 
Sbjct: 182 SAFIVEKGTEGFTFGKLEDKMGIHTSKTMELVFQDA---KVPAENLLGKEGEGFKIAMMT 238

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AEA     + Y+++R   G  L     +   +AD+ + + AA  L
Sbjct: 239 LDGGRIGVAAQALGIAEAALNDAVEYSKQRVQFGKPLCKFQNIGFKLADMKMKVEAARNL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E +  + +AA       I K +   +A  V  EA++  GG GY EE   AR
Sbjct: 299 VYKAAFKKQEGQPFTVDAA-------IAKRYASDVAMEVSVEAVQIFGGYGYSEEYPAAR 351

Query: 433 HYRESPANSILLGSGNAMVL 452
           H R++    I  G+   M++
Sbjct: 352 HLRDAKITQIYEGTNEVMLM 371


>gi|45659102|ref|YP_003188.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602348|gb|AAS71825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 534

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           GLGLTE   G+D A + +  +K  DG + L+G K F+++ P+   FI++A+     G   
Sbjct: 127 GLGLTEPDSGSDAAGMRTYAEKTKDG-FVLNGSKTFITNGPIGQVFIIMARTTKSRGPMG 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G    ++  K+G+ ++ T EL F + +     LLG L+  +G +   K 
Sbjct: 186 ISAFIVESKNKGFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLH--SGFLRIGKA 243

Query: 315 LIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +  +  ++    + GM   L   I Y+ +R   G  +++   +K  IA I + + AA  
Sbjct: 244 TLEWERTVLLAALMGGMENILENCIRYSWQRQQFGKSILNFFAIKEKIARIWVYLCAARR 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++ +A      K   E      + + I K +  +++  V ++A++  GG GY+ E S++
Sbjct: 304 MTYFVAR-----KKDFEPNVSLPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVS 358

Query: 432 RHYRESPANSILLGSGNAMV 451
           R YR+    +I  G G + +
Sbjct: 359 RFYRDVKLGTI--GGGTSEI 376


>gi|209521554|ref|ZP_03270255.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209498024|gb|EDZ98178.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 596

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 57/372 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSETQKQTFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D       ++LA+     EG  G   FLV
Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIVHLVLARTPNAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ +S     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAVAYAKERVQSRPVDGSAKQSVAIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           ++ +     A+ AL++  A+  D A    +EA  A+       + PI K W  +++  V 
Sbjct: 348 LSTMRSLTEASRALAYVAASHCDVAHRHPDEATRAKHQAIYEYLVPIVKGWSTELSVDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++    I  G+      D++    L  G  + ++L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTLRDGGKVAKELLA 467

Query: 471 TLEQDLGSSGKK 482
            + + + + G +
Sbjct: 468 GIAETVEALGAQ 479


>gi|91784793|ref|YP_559999.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91688747|gb|ABE31947.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 596

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 156/325 (48%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +A +     A+ AL++  A   D A   ++EA  A+       + PI K W  +++  V 
Sbjct: 348 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWSTELSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|254251442|ref|ZP_04944760.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124894051|gb|EAY67931.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 595

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 60/372 (16%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQRYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWIVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADDAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            R++  N I  G+ +   LD+L     G             D+G+  KK   I+ D +  
Sbjct: 432 VRDARINMIYEGTNSIQALDLLGRKVLG-------------DMGAKLKKFGKIVSDFVEA 478

Query: 494 CKEDKGLARFLT 505
                 +A F+ 
Sbjct: 479 EGVKPEMAEFVN 490


>gi|241661981|ref|YP_002980341.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864008|gb|ACS61669.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 595

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+   D       ++LA++    G  
Sbjct: 166 LTEPHCGTDLGILRTKAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGT 225

Query: 255 ----CFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                F+VP+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N  
Sbjct: 226 KGISLFVVPKFIPDASGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   + S+    V+   +  YA+ R     +SG    D+P        
Sbjct: 286 LNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + +RA A+     +   AL      S  +   R + A    ++ PI K +    
Sbjct: 346 DVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHKDESVRKDAADLVALLTPIAKAFLSDN 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 406 AFIATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D+G+  KK   +++D +     ++ +  F+ 
Sbjct: 455 --RKILGDMGAKMKKFGKLVQDFVEAEGTNEAMQEFIN 490


>gi|332185888|ref|ZP_08387635.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332014246|gb|EGI56304.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 598

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 51/342 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  +  ALM   +  +   + PK+ S E+  T             + LTE   GT
Sbjct: 125 LYPGLTHGATTALMGHGSEDLKSFYLPKMISGEWSGT-------------MCLTEAHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QVEGRVGCFL 257
           D+  + ++ +   DG Y ++G K F+S+    ++D  I L           V+G +  FL
Sbjct: 172 DLGLLRTRAEPQEDGSYAITGGKIFISAGDHDLTDNVIHLVLARTPDAPKGVKG-ISLFL 230

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  +DGS    NG+    +++K+G +++AT +LEF+++ G+++G+LN     +  M
Sbjct: 231 VPKYLPKDDGSVGPANGVSVAAIEHKMGLKASATCQLEFNDSKGWVVGELNKGLAAMFTM 290

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQPVMKRAIA 360
                +   I  +    ++   A+ YA+ R      GG          +I  P ++R + 
Sbjct: 291 MNTERVSVGIQGLGVNEIAYQSAVAYAKDRLQGRALGGAKRPDLPADPIIVHPDVRRMLM 350

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            + +      AL    A   D      +   ++  A +  +M P+ K     +A      
Sbjct: 351 TMRVYAEGCRALGQWAARGLDAEAHAIDPADKARAADFVALMTPVVKALFTDLAFDAANL 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A++  GG G+I +  I +  R++    I  G+     LD++ 
Sbjct: 411 AVQVHGGHGFIRDHGIEQFVRDARIAQIYEGTNGVQALDLVG 452


>gi|167581071|ref|ZP_02373945.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 596

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   ++E   A+       + P+ K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|254181106|ref|ZP_04887704.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184211645|gb|EDU08688.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 596

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A +      A ALS+  A   D A   + E   A+       + P+ K W  +M   
Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAANEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|228942797|ref|ZP_04105318.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975656|ref|ZP_04136197.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228784044|gb|EEM32082.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228816857|gb|EEM62961.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 337

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M   ++     LTE   G+D  A+ +  +++ D  + L+GH
Sbjct: 49  KRWGTEEQKRKWLP----EMATGNLLFSFALTEPEVGSDAKAVGTSYKQVDDH-FILNGH 103

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 104 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 158

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 159 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 210

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 211 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQ------EAGKKRQDRHTDAVIETT 264

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 265 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 316


>gi|256371495|ref|YP_003109319.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008079|gb|ACU53646.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 1146

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 29/337 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCL-SGHKWFLSSP-MSDAFIMLAQVEGRV------ 253
            TE   G+D+ ++ ++  +  +G + + +  K+F S+  ++D  ++ A V G V      
Sbjct: 157 FTETHAGSDLGSLRARATQTPNGEWRIGTAEKFFASNAGLADVALVAAHV-GEVRGVRSL 215

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FLV R   DGS      +RLK+K+  R+  T E++ ++    LL     +  P    +
Sbjct: 216 GLFLVRREQPDGS-LAFSVRRLKDKLATRAVPTGEVDLADAPAELL-----AAPPDGIHR 269

Query: 314 ILIYLDSA----IMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           IL  L  A     MS +G+ R++LAEA    +RR   G  L+   +    +A +     A
Sbjct: 270 ILESLTIARVANAMSAAGIARIALAEATIRGQRRVAFGRPLLAHALFADELARLRASQLA 329

Query: 369 ATALSFRLANSFDEA-KSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            + L+F LA     +  S   + AY   R  + + K    + A  V   AME  GG G++
Sbjct: 330 TSLLAFELAEETQSSLGSHHGDRAYQILRARSHVAKVRTAEQAAFVTQRAMEAFGGLGFV 389

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQDLGSSGKK 482
           E+  IAR +RE+    I  G+ +   LD   +L          E++ + L+   GS GK+
Sbjct: 390 EDAPIARWHREALVLPIWEGTPHVHALDAAEVLADRVVRDGFVERITAALD---GSVGKR 446

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
           +   +R + +   E    AR L   +   S AAA+ R
Sbjct: 447 LGDAVRRTAAELAEAPTNARHLLTHLGALSEAAAVAR 483


>gi|24216816|ref|NP_714297.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24198183|gb|AAN51315.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 534

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           GLGLTE   G+D A + +  +K  DG + L+G K F+++ P+   FI++A+     G   
Sbjct: 127 GLGLTEPDSGSDAAGMRTYAEKTKDG-FVLNGSKTFITNGPIGQVFIIMARTTKSRGPMG 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G    ++  K+G+ ++ T EL F + +     LLG L+  +G +   K 
Sbjct: 186 ISAFIVESKNKGFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLH--SGFLRIGKA 243

Query: 315 LIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +  +  ++    + GM   L   I Y+ +R   G  +++   +K  IA I + + AA  
Sbjct: 244 TLEWERTVLLAALMGGMENILENCIRYSWQRQQFGKSVLNFFAIKEKIARIWVYLCAARR 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++ +A      K   E      + + I K +  +++  V ++A++  GG GY+ E S++
Sbjct: 304 MTYFVAR-----KKDFEPNVSLPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVS 358

Query: 432 RHYRESPANSILLGSGNAMV 451
           R YR+    +I  G G + +
Sbjct: 359 RFYRDVKLGTI--GGGTSEI 376


>gi|325187778|emb|CCA22323.1| shortchain specific acylCoA dehydrogenase putative [Albugo
           laibachii Nc14]
          Length = 409

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 34/276 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRV 253
            GLTE   G+D  A ++  ++  DG + ++G K W  ++   D  I+ A     Q    +
Sbjct: 147 FGLTEPGNGSDAGAASTTARETKDG-FVINGTKAWTTNAHEGDQVIIFATTDKAQKHKGI 205

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP         G    + + K+G R+++T  L   +       LLG L       E
Sbjct: 206 SAFIVPM-----KTPGFSLGKKEEKLGIRASSTANLILEDVHIPKENLLGRLG------E 254

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +I LD+  + V+   + +A+A     I YA +R   G IL    +++  +AD+A+
Sbjct: 255 GFKIAMITLDAGRIGVAAQALGIAQASLDCAIKYAHQRKAFGQILAKNAIIQSKLADMAM 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  L+++ A   D     ++ AA A++ A      C         +A++ +GG GY
Sbjct: 315 EIEAARLLTYKAAMDKDNGLPITKIAAMAKLKASEVATMCSH-------QAIQILGGMGY 367

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +    RHYR++    I  G+     L +   L K
Sbjct: 368 VSDMPAERHYRDARITEIYEGTSEIQRLVIATSLNK 403


>gi|228909059|ref|ZP_04072888.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200]
 gi|228850567|gb|EEM95392.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200]
          Length = 382

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M   ++     LTE   G+D  A+ +  +++ D  + L+GH
Sbjct: 94  KRWGTEEQKRKWLP----EMATGNLLFSFALTEPEVGSDAKAVGTSYKQVDD-YFILNGH 148

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203

Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338
                   L D+ V      GP+       +   LD    S++   V++A+      + Y
Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +RRR      + +   ++  +A+ +++I AA +L        +  K R +    A I   
Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQ------EAGKKRQDRHTDAVIETT 309

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I KY+  KMA  +  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 310 IAKYFASKMAMKIATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361


>gi|316934710|ref|YP_004109692.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602424|gb|ADU44959.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 379

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 125 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL    LK K+G  ++ T  L F N     G LLG           M I++
Sbjct: 184 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----MIIMM 237

Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  ++     ++  +V L EA  YA++R   G  L+   V++  + D+A  IAA+ A
Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATAYAKQRVTFGKPLVKHQVIRHKLVDMAQKIAASQA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA   D+ +S   E    +  A  T  +C        +EA++  GG+GY+    + 
Sbjct: 298 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350

Query: 432 RHYRESPANSILLGSGNAM 450
           R YR+   N+I  G+   M
Sbjct: 351 RIYRDVKVNAIGGGTEEIM 369


>gi|227820752|ref|YP_002824722.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234]
 gi|227339751|gb|ACP23969.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234]
          Length = 598

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 83/416 (19%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   +    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAIPNGDGSYRISGQKIFISAGEHDMAENIIHLVLARIEGAPEGVKGISLFI 231

Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP  +L +DG P   NG+    +++K+G   N+T  + +    G+L+G  N         
Sbjct: 232 VPKFKLNDDGEPGARNGVSCGAIEHKMGIHGNSTCVMNYDEATGYLIGAENKGLN----- 286

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355
            + + ++ A ++V    +++AE     A +YAR     R +SG          +I  P +
Sbjct: 287 AMFVMMNEARLAVGMQGLAIAEIAYQNAANYARERLQGRSLSGVKAPEQKADPIIVHPDV 346

Query: 356 KRAIADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R++  I A + A       TAL   +A+  D    R        +M PI K        
Sbjct: 347 RRSLMTIKAFNEAGRAFTLWTALKSDIAHRSDNEAERQAADDILGLMTPILKGVLTDKGF 406

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A +  GG GYIEE  ++++ R++    I  G+     LD++     G  L     
Sbjct: 407 DHTVVAQQLFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAI--- 458

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
                   + G+ V+ + ++    C+E++G  R      AL        + G+ND+
Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRGDERLSAYTKAL--------KKGLNDL 498


>gi|11498451|ref|NP_069679.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304]
 gi|2649762|gb|AAB90397.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304]
          Length = 381

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 143/302 (47%), Gaps = 30/302 (9%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAA 213
           S+ SA + A +  P V      K F  E       P + K      + +TE   G+D+ A
Sbjct: 82  SIGSAVLTASLGCPMV------KYFGTEEQKERYLPKVVKGETPSAIAITEPDAGSDVQA 135

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           I ++ +++ DG + L+G K F+++  +S+  ++LA+ +   G   +   L +   +G   
Sbjct: 136 IKTKAERV-DGGWKLNGTKTFITNGSVSEWVVILAKTQPDAGYRGISAFLVETGWDGYEA 194

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +R+K K+G   + T E+   + F     ++G  N         +++ + + + + V  ++
Sbjct: 195 RRIK-KMGLNCHDTAEIYLKDVFVPETHIIGQENFGF-----YQLMRFFNESRVFVGAVQ 248

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + +A      A+ YA++R   G  LI+   ++  +AD+  DI AA  L ++ A   D  K
Sbjct: 249 LGMAVGAYERALEYAKQRKAFGKPLIEHQAIQFKLADMWKDIEAAKLLIYKAAWLIDRGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +    ++ A++ A  T       A     EA++  GG GY +E  I R+YR++   +I  
Sbjct: 309 ANPALSSAAKLFASET-------AIKATYEALQIFGGYGYSKEYDIERYYRDARVGTIYE 361

Query: 445 GS 446
           G+
Sbjct: 362 GT 363


>gi|39935206|ref|NP_947482.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649057|emb|CAE27578.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 379

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 125 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL    LK K+G  ++ T  L F N       LLG           M I++
Sbjct: 184 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAANLLGTEGAGF-----MIIMM 237

Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  ++     ++  +V L EA  YAR+R   G  L+   V++  + D+A  IAA+ A
Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATEYARQRVTFGKPLVKHQVIRHKLVDMAQKIAASQA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA   D+ +S   E    +  A  T  +C        +EA++  GG+GY+    + 
Sbjct: 298 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350

Query: 432 RHYRESPANSILLGSGNAM 450
           R YR+   N+I  G+   M
Sbjct: 351 RIYRDVKVNAIGGGTEEIM 369


>gi|300788948|ref|YP_003769239.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299798462|gb|ADJ48837.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 31/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVEG----- 251
            GLTE   G+D A+I ++ ++  DG + L+G K F+S   + MS    +LA V G     
Sbjct: 123 FGLTEPTAGSDAASIRTRARRDGDG-WVLNGTKMFISNAGTEMSLGVTVLA-VTGDGDKR 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G F +P    DG+P     Q L+ K+G  +  T EL F++    L GD  +       
Sbjct: 181 RFGTFFIP----DGTPGYEKGQPLR-KLGWHAMDTRELVFTDVR--LPGDHLIGEEGNGL 233

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + L  LD+  +SV+ + +SLA+A     + +A  R   G  L     +   +AD+A +I
Sbjct: 234 RQFLEVLDAGRISVAALGLSLAQASLDLALRHATDRQQFGRPLSGFQAVAHKLADMATEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL +R A   D+ +  S+EAA A       K +  ++A    + +++  GG GY+ 
Sbjct: 294 EAARALVYRAAWLGDQGRPFSQEAAMA-------KLYASEVANRAASASVQIHGGYGYMR 346

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E +I+R Y  + A  + +G G + V
Sbjct: 347 ESAISRFY--ADAKILEIGEGTSEV 369


>gi|254505266|ref|ZP_05117417.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222441337|gb|EEE48016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 620

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 51/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL T  T    + + P + S ++  T             + LTE   GT
Sbjct: 148 MYPGLTAGAIAALTTHGTDEQKQTYLPNMISGKWTGT-------------MNLTEPHCGT 194

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  I ++    +DG Y +SG K F+S+    MSD  I  +LA++EG       +  F+V
Sbjct: 195 DLGLIRTKAVSQADGSYKISGTKIFISAGEHEMSDNIIHLVLARIEGAPEGNKGISLFVV 254

Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           PR  + EDG+    NG+    +++K+G   NAT  + + +  G+L+G+ N     +  M 
Sbjct: 255 PRNEIAEDGTSGARNGVSCGSIEHKMGIHGNATCVMNYDDATGWLVGEENKGLRAMFVMM 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIA 360
               L  A+  +S   V+   A+ YA+ R + G  L             I  P ++R + 
Sbjct: 315 NEARLGVAVQGLSQSEVAYQNAVTYAKDR-IQGRALTGPKSPDKAADPIIVHPDVRRTLM 373

Query: 361 DI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            I A + AA      TAL   +++  ++ K +        +M P+ K     +       
Sbjct: 374 SIRAFNEAARALVIWTALHGDVSHRSEDDKDKQFSDDMMGLMTPVLKGVLTDIGFENAVN 433

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A +  GG GYI E  + +  R++    I  G+     LD++
Sbjct: 434 AQQMYGGHGYIGEWGMEQFVRDARIAMIYEGANGIQALDLV 474


>gi|221638614|ref|YP_002524876.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221159395|gb|ACM00375.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 591

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 43/315 (13%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S ++  T             + LTE   GTD+  + ++ +   DG Y ++G 
Sbjct: 146 RTWLPKMVSCDWTGT-------------MNLTEPHAGTDLGMMRTRAEPQEDGSYLVTGE 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       ++LA+  G       V  F+VP+ L +     G  N +   ++
Sbjct: 193 KIFISAGDHDMAENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   NAT  L +    G+LLG+L+     +  M     L   +   +    +   A
Sbjct: 253 EHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNA 312

Query: 336 IHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YAR     R +SG          LI  P ++R + D    +  A AL+F  A   D +
Sbjct: 313 VAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRS 372

Query: 384 --KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +E      ++ P+ K +           A +  GG GY+EE  +++  R++    
Sbjct: 373 VRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAM 432

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     LD++ 
Sbjct: 433 IYEGANGIQALDLVG 447


>gi|239817373|ref|YP_002946283.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239803950|gb|ACS21017.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 589

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 156/371 (42%), Gaps = 48/371 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++    +DG   ++G K F+S    D       ++L ++ G     
Sbjct: 164 LTEAHAGSDLGQVRTRATAQADGSLRVNGGKIFISGGEHDLTPNIVHLVLCRMHGSEVQA 223

Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +   LVP+LL DG+ N +  +R++ K+G   + T  + F +  G+L+G+     
Sbjct: 224 PAGPKGLSLVLVPKLLPDGTRNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGL 283

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG------------ILIDQ 352
             +  M     L  A+  +  +  +  +A  YA  RR+  + G            ++ + 
Sbjct: 284 AAMFVMMNAARLHVALQGIGLLDAAWQKADAYAAERRQMRAPGTVPASRGSEAADLIAEH 343

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R +      I  A  L++R A   D      +AK+R     +  ++ P+ K  C +
Sbjct: 344 PAIRRILDTQRAWIDGARTLAYRSALMLDVAAHDADAKARERAQRWCSLVTPVLKAACTQ 403

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
            A    +E ++  GG GY+ E  I +  R++    I  G+     +D+L   +L  G   
Sbjct: 404 QAFHGASECLQVFGGHGYVREWGIEQIVRDARVTMIYEGTNEIQAIDLLVRKVLPDGGAG 463

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
              +   L   L +S        RD+ +  +      R+L   IA+A+ A  +      +
Sbjct: 464 MSAVLLELRDALDAS--------RDADADVQRRLAQLRYLGTTIAMAAQANPVL---PYE 512

Query: 525 IADVFLENRFL 535
           +AD +L    L
Sbjct: 513 VADAYLRAVML 523


>gi|221134571|ref|ZP_03560876.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Glaciecola sp. HTCC2999]
          Length = 589

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 46/330 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++    +  +   + PK+ + +Y  T             + LTE   G+ +A I
Sbjct: 128 TTAAANVIKHFASETLQAQFLPKMLTGQYSGT-------------MALTEPHAGSGLADI 174

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261
           T+       G Y + G K ++S     +S+  I  +LA++ G       +  F+VP  RL
Sbjct: 175 TTTAYPTEQGHYLIKGSKLYISGGEHELSENIIHLVLAKIPGGPAGVKGISLFVVPKFRL 234

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311
             DG P   N +    L +K+G R   +  L F    +  G+L+G+    L      + +
Sbjct: 235 NNDGQPEQRNDVTLAGLIHKLGYRGTTSTALTFGENGDCHGYLVGEPHKGLQYMFMMMNE 294

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++ +   +A++   G + SL     YA+ R   G  +++   +KR +         A  
Sbjct: 295 ARVGVGFGAAMIGYRGFQYSL----DYAKDRIQGGKPIVEHGDVKRMLLLQKAYTEGAMN 350

Query: 372 LSF---RLAN---SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L F   RL +   + D+  +R   A    ++ PI K W  +  P     A++ +GG+GY 
Sbjct: 351 LCFYGARLVDDMHTHDDESTRQSSAQLLDLLTPIIKAWPSEYGPKSNDLAIQVLGGAGYT 410

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  + + +R++  N I  G+     LD++
Sbjct: 411 REYPVEQLWRDNRLNPIHEGTNGIQALDLI 440


>gi|261251343|ref|ZP_05943917.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP
           102891]
 gi|260938216|gb|EEX94204.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP
           102891]
          Length = 384

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 25/275 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D AA+ +  Q++ DG Y ++G K F+S +  +D  +++A+   +G  G   F
Sbjct: 124 LTEPNAGSDAAALVTSAQQVDDG-YLINGSKVFISGAGETDVLVVMARTSDDGAKGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +VP      +  G+ Y R + K+G  S  T  + F N       LLG+     G V  MK
Sbjct: 183 VVP-----ATAQGISYGRKEPKMGWNSQPTRSINFDNVKIPKDHLLGE--EGQGFVFAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    ++ A  S+   + +L +A  Y + R   G  +     ++  +AD+A ++ AA  
Sbjct: 236 GLDGGRINIATCSIGTAQQALNQATQYLKERKQFGKPIAQFQALQFKLADMATELVAARH 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A+  D   +  E  AY      + K +   +   V  +A++  GG GYI+E  + 
Sbjct: 296 LVRLAASKLDSGDT--EATAYC----AMAKRFATDVGFKVCDQALQLYGGYGYIKEYPME 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNLF 465
           R++R+   + IL G+   M V+    LL +G  +F
Sbjct: 350 RYFRDVRVHQILEGTNEIMRVIIARRLLAEGAQIF 384


>gi|56695213|ref|YP_165561.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56676950|gb|AAV93616.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 567

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 34/301 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K F+
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVPR L D     G  N L    L++K+
Sbjct: 197 SWGDNDFCDNVCHLVLARLPDGVPGTKGISLFLVPRNLPDENGNAGVANSLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G+ +     +  M     L      V     +   A+ YA
Sbjct: 257 GLHGSPTCVMQYDGATGWLVGEEHGGMAAMFTMMNNARLGVGGQGVGVAEAAWQHAMAYA 316

Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R     + G + D   ++R +  +  D+ AA A+    A + D   A   +E  A A 
Sbjct: 317 MERKQGKSASGTIADHADVRRMLTSMKADVFAARAILAACAVAIDMGNATGSAEWKARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI K +      AV    ++  GG G+IEE   A+ YR+    +I  G+     +D+
Sbjct: 377 FLTPIAKAFGTDTGIAVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDL 436

Query: 455 L 455
           +
Sbjct: 437 V 437


>gi|77462751|ref|YP_352255.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77387169|gb|ABA78354.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 591

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 43/320 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + ++  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 141 TEEQKRTWLPKMVTCDWTGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            ++G K F+S+   D       ++LA+  G       V  F+VP+ L +     G  N +
Sbjct: 188 LVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              ++++K+G   NAT  L +    G+LLG+L+     +  M     L   +   +    
Sbjct: 248 TVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAET 307

Query: 331 SLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR     R +SG          LI  P ++R + D    +  A AL+F  A 
Sbjct: 308 AYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQ 367

Query: 379 SFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             D +  +  +E      ++ P+ K +           A +  GG GY+EE  +++  R+
Sbjct: 368 LIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRD 427

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +    I  G+     LD++ 
Sbjct: 428 ARIAMIYEGANGIQALDLVG 447


>gi|115372660|ref|ZP_01459967.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|310823814|ref|YP_003956172.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115370381|gb|EAU69309.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396886|gb|ADO74345.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 378

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 44/279 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----VGC 255
           LTE   G+D+A +++  +   D  Y L+G K F+++   ++ + + A V+       + C
Sbjct: 124 LTEPGAGSDVAGLSTTARLDGDH-YVLNGSKCFITNGTYAEQYTVFATVDKDRKHKGISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV------ 309
           F+V     +G P GL   + +NK+G R++ TV L F         D+ V   PV      
Sbjct: 183 FVV-----EGQPPGLTIGKHENKMGQRASNTVTLTFE--------DVRV---PVANRIGE 226

Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E    LI +++        A+ SV   R +L  ++ Y+ +R   G  + +   ++  +AD
Sbjct: 227 EGQGFLIAMETLDNSRPLTAMFSVGIARAALEHSLEYSSQRRTFGKAIREHQGVQFMLAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + ++I AA  L+++ A   DE +  +  ++YA+  A         MA  V  +A++  GG
Sbjct: 287 MGMNIQAARLLTYQSALLLDEGQKNTLISSYAKCFA-------ADMAMKVTTDAVQVYGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GYI+E  + +  R++    I  G+     L +   L K
Sbjct: 340 YGYIKEYPVEKLMRDAKLIQIYEGTSQVQRLVIARELFK 378


>gi|294084749|ref|YP_003551507.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664322|gb|ADE39423.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 590

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 175/388 (45%), Gaps = 66/388 (17%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           HL++     A  +  + +P     + P + S E+  T             + LTE + GT
Sbjct: 126 HLLTQGAIDA--LEQVASPEQKATFLPNLISGEWSGT-------------MNLTEPQAGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257
           D+ A+ +      D  Y + G K +++     MS   I L           V+G +  F 
Sbjct: 171 DLGALRTMATPNGDH-YLIKGQKIYITYGQHDMSKNIIHLVLARTPDAPDGVKG-ISLFA 228

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           VP++L  +DGS    N +    ++ K+G +++ T  L++ +     G+L+G+ N     +
Sbjct: 229 VPKILVNDDGSLGEANDVFCVSIEKKLGIKASPTAVLQYGDNNGAVGYLIGEENKG---L 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------HVSGGILIDQPVMKR 357
           E M   + +++A  +V    V+++E     A+HYA  R          G  +I  P + R
Sbjct: 286 EYM--FLMMNNARFAVGMQGVAISERAYQQAVHYAHDRVQGTPIAGNKGDSIIHHPDVLR 343

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIA 413
            +  +  +I A  AL        D++    E AA+    A ++ P+ K W  + + A+ +
Sbjct: 344 MLTIMKAEIEAMRALMVVGGACLDKSHG-DENAAFWHERASLLIPVIKGWMTERSQALTS 402

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFST 471
           +A++  GG G+IEE  +A+HYR++    I  G+      D++    L  G      LF+ 
Sbjct: 403 DAVQIHGGMGFIEETGVAQHYRDARILPIYEGTTAIQANDLVFRKTLRDGGAAVTSLFAD 462

Query: 472 LEQDLGSSGKKVITILRDS-ISLCKEDK 498
           ++ D+ +    +IT   DS ++L K+ K
Sbjct: 463 IDTDMNA----IITTQNDSTMALAKQVK 486


>gi|158521318|ref|YP_001529188.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510144|gb|ABW67111.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 604

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 62/343 (18%)

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
           ++A M+    T    K + P + S ++  T             + LTE + GTD+ AI +
Sbjct: 132 STAGMIQHHGTEEQKKKYIPNLVSGKWGGT-------------MLLTEPQAGTDVGAIET 178

Query: 217 QGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFLVPRLL--E 263
              K  DG Y L+G+K F+++    +++  I  +LA++EG       +  F+VP+ +  +
Sbjct: 179 SAVKNPDGTYSLTGNKIFITNGEQNLTENIIHPVLARIEGHDPGTKGISIFIVPKFMVND 238

Query: 264 DGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           DGS    N +     + K+G  ++AT  +   +     GFLLG+        + MKI+  
Sbjct: 239 DGSLGERNDIVCTGTEEKMGIHASATCSMSLGSKGKCVGFLLGEEK------QGMKIMFE 292

Query: 318 LDSAIMSVSGMRV------SLAEAIHYARRRHVSGGIL------------IDQPVMKR-- 357
           + +     +G++       +   A++YAR R  S  I+            I  P ++R  
Sbjct: 293 MMNEARMATGLQAFAYASAAYLIAVNYARERIQSRDIMDYKNPAAPGVPIIKHPDVRRNL 352

Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
               +I D        T ++   A   ++   R   +    ++ P+ K +       V  
Sbjct: 353 LWMKSIVDGMRSFFYYTGVAGTKAEIVEDETERRRNSGLFELLTPLIKEYLSFRGHEVCV 412

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +AM+ +GGSGYI+E  + ++ R+    +I  G      +D+L 
Sbjct: 413 QAMQVLGGSGYIKEYLVEQYTRDCKITTIYEGCSGVQAMDLLG 455


>gi|284164207|ref|YP_003402486.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013862|gb|ADB59813.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 134/276 (48%), Gaps = 40/276 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +     G  ++E   G+D+++++++ +K  D  + ++G+K W  +  + D F+ML +
Sbjct: 112 PVARGEKISGAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGTVGDFFVMLCK 170

Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                EGR   F   +++ +   +G   +++  K+G R++ T EL        +L D+ V
Sbjct: 171 TDPDAEGRYDGF--SQIVVEADRDGFESEKITGKLGIRASDTAEL--------ILDDVRV 220

Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
              P E++         + + + D+    V+   V +A+     A+ YA+ R   G  + 
Sbjct: 221 ---PEENLIGDQGAAFLQQMQFFDATRTGVAAQGVGIAKGALRAALEYAQDREQFGQPIS 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  +AD+A    AA  L+++ A + D+    ++       +A + K +  ++A  
Sbjct: 278 EFQAIQHKLADMATKTEAARNLTYKAAWNVDQGNDITK-------LASMAKEYSSRIAVD 330

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  EA++  GGSGY+ +  + R YR+S    I  G+
Sbjct: 331 VANEAVQIHGGSGYVNDFPVERFYRDSKITQIYEGT 366


>gi|171060702|ref|YP_001793051.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170778147|gb|ACB36286.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 596

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 143/341 (41%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP     + P++ S E+  +             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTPEQQATYLPRLTSGEWTGS-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ + ++DG Y ++G+K F+S+   D       ++LA++ G       +  F+V
Sbjct: 175 DLGLLRTKAEPLADGSYAITGNKIFISAGEHDLAANIVHLVLARLPGAPEGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G+ NG+    L++K+G   NAT +L      G L+G+ +     +  M 
Sbjct: 235 PKFNVNADGSLGARNGIWCGGLEHKMGIHGNATAQLVLDGAVGTLVGEPHKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355
               L   + S+    V+   A+ YA+ R     ++G   +D+P              + 
Sbjct: 295 NAARLGVGMQSLGLTEVAYQNAVAYAKDRIQMRALTGPKALDKPADPIIVHPDVRKMLLT 354

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA A+    +   TAL      S  +   R   A    ++ PI K +         +  
Sbjct: 355 ARAYAEGGRALCVHTALMLDQELSHPDEAVRRASADEVALLTPIVKAFLTDNGWIATSHC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG GYI E  + ++ R++  N I  G+     LD+L 
Sbjct: 415 LQVFGGHGYIREWGMEQYVRDARINMIYEGTNTIQSLDLLG 455


>gi|110681102|ref|YP_684109.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans
           OCh 114]
 gi|109457218|gb|ABG33423.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans
           OCh 114]
          Length = 593

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251
           + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPE 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ L  EDG+    NG+   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFLVKEDGTLGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351
                +  M     L   +  +S    +   A+ YA+     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAP 409
            P ++R++ D    +  A A     A   D A +S  ++A     ++ P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +A +  GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 401 DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447


>gi|148547625|ref|YP_001267727.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511683|gb|ABQ78543.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 581

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 31/302 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE----GR 252
           LTE + G+D++ +  +   + DG Y +SG+K F+S    D       ++LA++     G 
Sbjct: 164 LTEPQAGSDLSLLRCRAVPLGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAPPGN 223

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G    LVP+ LEDG  N L    L++K+G R +AT  L      G+L+G  +     + 
Sbjct: 224 RGLSLLLVPKWLEDGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLAAMF 283

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVS------GGILIDQPV-----MKRA 358
            M     L   +  +     +  +A  YA  RR +S      GG+    P+     M+R 
Sbjct: 284 VMMNSARLHVGLQGLGHAEAAWQQARDYALERRQMSAPGRAKGGVQGADPIHLYPAMRRV 343

Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           + ++ +      AL++       +A++  E   R++ A    ++ PI K    +   ++ 
Sbjct: 344 LLELRVRTEGMRALAYWTAQWLEIADAAVEPAQRAKAATLVALLTPIVKAAFTEQGFSLA 403

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFS 470
           ++A++  GG GY +E +I +  R+S    I  G+      D++   +L  G   F  L  
Sbjct: 404 SQALQVFGGYGYTQEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFALLLG 463

Query: 471 TL 472
            L
Sbjct: 464 EL 465


>gi|145225519|ref|YP_001136197.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315445872|ref|YP_004078751.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145218005|gb|ABP47409.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315264175|gb|ADU00917.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 380

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 24/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+T +   + DG Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALTCRATAV-DGGYRITGSKAWITHGGIADFYNLFARTGEGSQGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR  E     GL + + + K+G  +  T    + +    L  D  + T           
Sbjct: 186 VPRDTE-----GLTFGKPEEKMGLHAVPTTAAHYDDAN--LDSDRRIGTEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA     EA+ Y++ R   G  +ID   +   +AD+A  + +A   
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYSQERTTFGRKIIDHQGLAFLLADMAAAVDSAR-- 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++ +GG+GY  +  + R
Sbjct: 297 ----ATYLDAARRRDAGLPYSR-HASVAKLVATDAAMKVTTDAVQVLGGAGYTRDYRVER 351

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
           + RE+    I  G+     L +   L +G
Sbjct: 352 YMREAKITQIFEGTNQIQRLVISRHLTRG 380


>gi|226941823|ref|YP_002796897.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716750|gb|ACO75888.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
          Length = 594

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 65/349 (18%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P +++ ++ AL    +  +   + PK+ S E+  T             + LTE   G+
Sbjct: 122 LAPMLSTGAIEALEHNGSDEIKATYLPKLISGEWAGT-------------MNLTEPNAGS 168

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++    +DG Y ++G K F++     M+D  + L         A V+G +  F+
Sbjct: 169 DLAQVRTKAVPQADGSYLITGQKIFITWGEHDMTDNIVHLVLARLPDAPAGVKG-ISLFV 227

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           VP+ L +     G+ N +    +++K+G   + T  + F +     G+L+G+LN      
Sbjct: 228 VPKFLVNADGSLGARNDVRCVSIEHKLGIHGSPTAVMSFGDQGGAVGYLVGELNKGLA-- 285

Query: 310 EDMKILIYLDSAIMSVS--GMRVS---LAEAIHYAR---------RRHVSGGILIDQPVM 355
               + + +++A M V+  GM +S     +A+ YAR          R  +   +I  P +
Sbjct: 286 ---HMFVMMNNARMGVAVQGMAISERAYQQAVEYARDRIQCRELGSRDPASVAIIRHPDV 342

Query: 356 KRAIADIALDIAAATALSFRLA--------NSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           +R +  +   I A   L++           +   E K+R +  A    + PI K W  + 
Sbjct: 343 RRMLMTMRAQIEAQRLLTYAAGAALDRAARHPVPEEKARQQ--ALINFLIPIVKGWNTEQ 400

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  + +  ++  GG G+IEE   A+H+R++   SI  G+     +D++ 
Sbjct: 401 SVEITSLGVQVHGGMGFIEETGAAQHFRDARITSIYEGTTGIQAMDLIG 449


>gi|77461388|ref|YP_350895.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385391|gb|ABA76904.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 598

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 52/337 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  I ++    +DG Y ++G K F+S+    MSD  I L         A  
Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAVTGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L D     G  NG+    +++K+G +++AT  L F +  GFL+G+ N 
Sbjct: 224 KG-ISLFIVPKFLPDASGEAGERNGVSCGSIEHKMGIKASATCVLNFDDAKGFLIGEPNK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV------ 354
               +  M     L + +  +     S   AI YA    + R ++G    D+P       
Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRALTGAKSPDKPADPIIVH 342

Query: 355 --MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
             ++R +  +        AL++  A   D      +A++R E       + PI K +   
Sbjct: 343 PDVRRMLLTMKAFNEGNRALTYFTAQMLDVAHLSPDAEARQEAEDLLAFLTPICKAFMTD 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
               V    M+  GG G+I E  + +  R+     I  G+     LD+L           
Sbjct: 403 TGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG---------- 452

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                  + LGS GK +    +     C  + G A+ 
Sbjct: 453 ------RKVLGSQGKLLRNFTKIVHKFCAANAGNAQL 483


>gi|89899081|ref|YP_521552.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89343818|gb|ABD68021.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 569

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 30/305 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252
           LTE + G+D+  + ++ Q  +DG   LSG K F+S    D       ++LA++     G 
Sbjct: 164 LTEPQAGSDLGLVRTKAQPQADGSCRLSGTKIFISGGEHDLTDNIVHLVLARLPDAPPGP 223

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G   FL P+ + DG+ N +  +R++ K+G   +AT  + F    G+++G+       + 
Sbjct: 224 KGLSLFLSPKFMPDGARNPVHCERIEEKMGLHGSATCVMRFDEATGWIVGEPGRGLNAMF 283

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----------VSGGILIDQPVMKR-- 357
            M     L   +  +  +  +  +A  YA+ R                ++++ P M+R  
Sbjct: 284 VMMNAARLHVGLQGIGLLDAAWQKADAYAKERRQMRAPVRGTSAAEADLIVEHPAMRRIL 343

Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
               A  D    +A  TAL   +      +K ++E   +  ++ P+ K      A    +
Sbjct: 344 DTQRAWIDGGRVLAYKTALELDVIKHHPNSKRKAEAERWCSLVTPVLKAAWTAQAFNGAS 403

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFST 471
           + ++  GG GY+ E  I +  R+S    I  G+     +D+L   +L  G      L   
Sbjct: 404 DCLQVFGGHGYVREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGAGLTALLQQ 463

Query: 472 LEQDL 476
           L  DL
Sbjct: 464 LSDDL 468


>gi|170750227|ref|YP_001756487.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656749|gb|ACB25804.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 579

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 26/280 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+A + ++     DG Y ++G+K +++     ++D  + L         A
Sbjct: 152 MNLTEPQAGSDLALLRTRAVPAGDGTYRITGNKIYITYGEHDLADNIVHLVLARLPDAPA 211

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
              G +  FLVP++L DG+ N L    +++K+G  ++ T  + F +     G+L+G  N 
Sbjct: 212 GTRG-ISLFLVPKVLPDGTRNDLRCSGIEHKLGIHASPTCSMAFGDQVGATGWLIGQENK 270

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMK 356
               +  M     L+  +  V     +   A+ YA+ R     +        +   P ++
Sbjct: 271 GLACMFTMMNAARLNVGLQGVGVAEAATQRALAYAQERRQGKAVGAAEATSPIAAHPDVQ 330

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAE 414
           R +  +    AAA A+ +  A + D AK    +AA  R  ++ P+ K +   +A  V + 
Sbjct: 331 RMLLTMKASTAAARAICYLTAAALDAAKGPEGQAALDRASLLTPVAKAFATDLANEVTSL 390

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            ++  GG G++EE   A+  R++    I  G+     +D+
Sbjct: 391 GVQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDL 430


>gi|162451848|ref|YP_001614215.1| butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161162430|emb|CAN93735.1| Butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 619

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 159/365 (43%), Gaps = 64/365 (17%)

Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +A ++    TPR    +  +++  ++  T             + LTE + G+
Sbjct: 132 MYPGLTYGAAEVIEHFGTPRQRDLFLKRMYGGQWSGT-------------MCLTEPQAGS 178

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+ +  +   K  DG Y + G K F+S    D       ++LA+VEG       +  F+V
Sbjct: 179 DVGSSRTSAVKQKDGKYLIRGTKIFISGGDQDLTENVVHLVLARVEGAPPGTKGLSLFVV 238

Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P  R+ +DGS   PN +    +++K+G   ++T  L F  +    G L+G +     P  
Sbjct: 239 PKIRVNDDGSLGGPNDVVVGNIEHKMGINGSSTCVLNFGESDACLGELVGTVEHQGMP-- 296

Query: 311 DMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL------------IDQP 353
             ++   ++ A +SV    VS+A      A+ YA+ R     IL            ID P
Sbjct: 297 --QMFRMMNGARISVGLQGVSVASSAYLNALEYAKDRKQGSSILQWKDATAPRVPVIDHP 354

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYAR----IMAPITKYWCC 405
            ++R + D+   +    AL  +LA   D            AAY +    ++ P+ K +  
Sbjct: 355 DVRRMLLDMKSRVEGIRALIIKLARHQDAVAVYQGKDDRAAAYNQGQVDLLVPLVKAYSS 414

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNL 464
             A  V   A++  GG+GY ++  + ++ R++   SI  G+ +   +D++   L +G  +
Sbjct: 415 DQAFRVCETAIQTFGGAGYTKDYPVEQYCRDAKVFSIYEGTNHIQAMDLVGRKLGQGGGV 474

Query: 465 FEQLF 469
             Q F
Sbjct: 475 NLQAF 479


>gi|159037973|ref|YP_001537226.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157916808|gb|ABV98235.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 381

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 17/266 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E +GG+D A +T++  +  DG Y +SG K W   + ++D F +  +  G  G   +  
Sbjct: 127 LSEPQGGSDAAGLTTRAARDGDG-YVVSGTKAWITHAHVADFFNIFCRTGG-AGARGISC 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           LL D S  G+  Q  +  +G  ++   ++ F  T   +  D  +          +  LDS
Sbjct: 185 LLADRSMPGIQPQVAERTMGLHASPVAQIAFDETR--VPADRLIGGEGEGFGIAMSALDS 242

Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   V LA+A     + YAR R   G  ++D   +   +AD A  I+AA AL   
Sbjct: 243 GRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDFQGLGFMLADAATQISAARALMLT 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  S EAA A++ A         +A  V  +A++ +GG+GY+ +  + R+ R
Sbjct: 303 AARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTIDAVQVLGGAGYVADHPVERYMR 355

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           E+    I+ G+     + +   L KG
Sbjct: 356 EAKVLQIVEGTNQIQRVVISRALAKG 381


>gi|332016277|gb|EGI57190.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 411

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             L+E   G+D  A ++  +  +DG IY ++G K W  ++  + A I+ A  +       
Sbjct: 150 FALSEPGNGSDAGAASTTAK--ADGSIYTINGTKSWITNAFEASAIILFATTDKSKKHKG 207

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +  ++ D    GL   + ++K+G R ++T  L F +     +   N+   P    KI ++
Sbjct: 208 ISAIVMDSPTAGLSLGKKEDKLGIRGSSTCSLIFEDC---QVPQDNILGKPGMGFKIAMM 264

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++   + +A+A     + YA +R   G  +I    +++ IAD+AL + ++  
Sbjct: 265 TLDAGRIGIAAQALGIAQASLDCAMDYASKRQAFGQSIIKLQAIQQKIADMALKLESSRL 324

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A   D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    
Sbjct: 325 LTWRAAQLKDNGKPYTKEAAMAKLSASETATFCAH-------QCLQILGGMGYVSDMPAE 377

Query: 432 RHYRESPANSILLGS 446
           RHYR++    I  G+
Sbjct: 378 RHYRDARITEIYEGT 392


>gi|83854767|ref|ZP_00948297.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842610|gb|EAP81777.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
          Length = 600

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 46/330 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE   GTD+  + ++     DG Y ++G K F+SS    M+D  I  +LA++EG   
Sbjct: 168 MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQKIFISSGEHDMADNIIHLVLAKIEGGPE 227

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    N +    ++ K+G   N+T  + +    G+LLGD +
Sbjct: 228 GIKGVSLFIVPKFMVKEDGSLGERNAVSVGSIEEKMGIHGNSTCVMNYDGAVGYLLGDEH 287

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351
                +  M     +   +  ++   V+   A+ YA+ R     V+G          LI 
Sbjct: 288 KGMRAMFTMMNEARVGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGTEHPDKPADPLIV 347

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409
            P ++R++ +    +  A A     A+  D A    ++ A     +M P+ K +   +  
Sbjct: 348 HPDIRRSLMEQKSFVEGARAFILWGASLIDAAHRADDKDADGLVSLMTPVIKGFLTDIGY 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +  +A +  GG GYIEE  +++  R++    I  G+     LD++              
Sbjct: 408 DMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 454

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499
             L QD    GK V+       +  KE+ G
Sbjct: 455 RKLAQD---GGKHVMAFFDMVKTFIKENAG 481


>gi|312898588|ref|ZP_07757978.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
 gi|310620507|gb|EFQ04077.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
          Length = 379

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A   +   K  D  Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 123 FALTEPNAGTDAAGQQTVAVKEGDH-YVLNGSKIFITNGGAADIYIVFAMTDKSQGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +   +G  + + ++K+G  ++ T+EL F N     +   N+     +  KI ++ 
Sbjct: 182 SAFILEKGMDGFTFGKKEDKMGIHTSQTMELVFQNV---KVPAENLLGQEGKGFKIAMMT 238

Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+         +LA+AI Y+++R   G  L     +   +A++A  I AA  L
Sbjct: 239 LDGGRIGVAAQALGIAEAALADAIEYSKQRVQFGKPLCKFQAISFKLAEMATKIEAARQL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A   +E K  S +AA A++       +   +A  V  +A++  GG GY EE  +AR
Sbjct: 299 VYKAAMRKEEKKPYSVDAAMAKM-------YASDIAMEVTTDAVQIFGGYGYSEEYPVAR 351

Query: 433 HYRESPANSILLGSGNAMVL 452
           H R++    I  G+  A  L
Sbjct: 352 HMRDAKITQIYEGTNEAQRL 371


>gi|111017325|ref|YP_700297.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110816855|gb|ABG92139.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 396

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 38/284 (13%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           REY P     M          L+E   G+D+AA++++ ++ +DG + +SG K W   +  
Sbjct: 115 REYLPR----MATGDFLSAFALSEPDAGSDVAALSTRARREADG-WRISGQKMWCTFADG 169

Query: 240 SDAFIMLAQVEG--------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +D   + A+            + CF++P+   +  P G+    ++ KIG     T EL F
Sbjct: 170 ADYLQVFARTSPIDRDHRSRGISCFIMPKPRGE-LPPGVTGTPVR-KIGYHGWKTWELSF 227

Query: 292 SNTFGFLLGD---------LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            N +    GD           V+ G +E  +I     +A  ++   R +L +++ YAR+R
Sbjct: 228 DNAYA--AGDSMVGPEGEGFKVAMGDLETARI----HTAARAIGVARGALEDSVAYARQR 281

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  IA +A ++ AA +L +R+    D  +  + EA+       + KY
Sbjct: 282 VQFGRPIGENQAIRFKIAHMATEVEAARSLMYRVCTEVDAGRRNTVEAS-------MVKY 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +MA  V +EA++  GG+GY  + ++ R++R++    I  G+
Sbjct: 335 LATEMAERVTSEALQIHGGAGYTTDFAVERYWRDAKLTKIFEGT 378


>gi|94497944|ref|ZP_01304509.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94422672|gb|EAT07708.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 572

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 151/340 (44%), Gaps = 36/340 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIM 245
           AP+        + LTE   GTD+A + ++ + + DG + ++G K F+SS    M+   + 
Sbjct: 150 APLISGEWTGAMALTESGAGTDLALLKTKAEDLGDGRFAITGQKIFISSGDHDMASNIVH 209

Query: 246 L---------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           L         A V+G +  FLVP++L D + N +    L+ K+G  +  T  + +    G
Sbjct: 210 LVLARLPDAPAGVKG-ISLFLVPKMLPDDTRNTMSVGALEKKMGIHAQPTCVMNYDGATG 268

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGG-- 347
           +L+G+ +     +  M  ++  +  ++ + G+ ++ A     A       + R   GG  
Sbjct: 269 WLVGEPHRG---LAAMFTMMNAERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSSDGGRG 325

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPI 399
              +I+   ++R +  +   + A  AL+   A  +D A+       R++  A   ++ P+
Sbjct: 326 PVAIIEHADVRRMLLKVRAFVEAGRALAGWTALQWDRAQGHADPAIRADADALVALLTPV 385

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYI E  + +  R++    I  G+     +D++   L
Sbjct: 386 VKAAFTDFGFESAVAAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVGRKL 445

Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496
              G  + E+LF  +E DL    G ++   +R+++ L ++
Sbjct: 446 PMAGGTVVERLFDQIEMDLQKCEGVEMAERVRNALGLFRD 485


>gi|307728456|ref|YP_003905680.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307582991|gb|ADN56389.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 595

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ S  +  T             + LTE   GTD+  + ++ +  SDG Y
Sbjct: 144 TPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFIPNDAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +         A A S+  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADEAVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|148259028|ref|YP_001233155.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146400709|gb|ABQ29236.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 596

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 64/390 (16%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++  + VAL    +    K W P I S ++  T             + LTE   GT
Sbjct: 125 LYPGLSHGAYVALKHSGSDEQKKAWLPNIVSGKWTGT-------------MCLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257
           D+  + ++     DG Y ++G+K F+S+   D       ++LA+       V+G +  FL
Sbjct: 172 DLGMLRTKAVPNDDGTYSITGNKIFISAGEHDLAENIVHLVLARLPDAPAGVKG-ISMFL 230

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  EDG+    NG+    +++K+G   +AT  + F    G+L+G+ N     +  M
Sbjct: 231 VPKFLPREDGTLGPRNGMQCTAIEHKMGLNGSATCAMSFDGATGWLVGEPNKGLAAMFKM 290

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK--- 356
                L   I  +    V+   A+ YAR R     ++G          IL+   V +   
Sbjct: 291 MNTERLSVGIQGLGIAEVAYQNAVAYARERIQGRSLTGTKAPEKQADPILVHPDVRRMLL 350

Query: 357 --RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             RA  +    +A   A    +    D+  ++     +A +M P+ K     +   + + 
Sbjct: 351 TSRAYIEGCRALAGWVARELEILEKSDDGDAKQAADDFASLMTPVVKAMFTDLGFEIASL 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A++  GG GYI +  I ++ R++    +  G+     LD++                L Q
Sbjct: 411 AVQTYGGHGYIRDHGIEQYVRDARIAMLYEGTNGIQALDLVG-------------RKLPQ 457

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFL 504
           D G    + +  + + I   +++  LA FL
Sbjct: 458 DGGRLLTRFLDPVLEFIDAHQDNDALAEFL 487


>gi|83311733|ref|YP_421997.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946574|dbj|BAE51438.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 592

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 40/281 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+AAI ++     D  + LSG K F++     ++D  I L         A
Sbjct: 162 MNLTEPQAGSDLAAIRTKAAPEGD-KFRLSGQKIFITYGDHDLADNIIHLVLARLPDAPA 220

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            V+G +  F+VP++L DGS N +    L++K+G   + T  + F +  G  LG+L     
Sbjct: 221 GVKG-ISLFVVPKMLPDGSRNDVKCVSLEHKLGIHGSPTAVMSFGDHEG-ALGELVGQ-- 276

Query: 308 PVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG----------GILID 351
           P   ++ + + ++ A ++V    +++AE     A +YAR R V G            ++ 
Sbjct: 277 PHRGLEYMFVMMNHARLAVGLQGLAIAERAYQQARNYARDR-VQGKPVGWTGSGPASIVH 335

Query: 352 QPVMKRAIADIALDIAAA-----TALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +   I A      TA +F  +A+   E  +R E +     + PI K WC 
Sbjct: 336 HPDVRRLLMTMKSGIEAMRGIHYTAAAFSDIAHHHPEPNARYEASQRLEFLTPIAKGWCT 395

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++   + +  ++  GG GYIEE   A+H R++   +I  G+
Sbjct: 396 ELGQHIASLGVQVHGGMGYIEETGAAQHLRDARITTIYEGT 436


>gi|170106339|ref|XP_001884381.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82]
 gi|164640727|gb|EDR04991.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82]
          Length = 370

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 39/276 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++ +K  D  + ++G K W  +S  ++ F++ A ++   G     C
Sbjct: 114 LSEPASGSDAFALQTRAKKDGDN-WIINGSKMWITNSYEAEIFLIFANIDTTKGYKGITC 172

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL  + +      G+   + + K+G R+++T  L F +     +   NV  G     KI 
Sbjct: 173 FLATKDM------GIQIAKKEQKLGIRASSTCTLNFDD---LKIPAENVIGGEGRGYKIA 223

Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
           I  L+   + ++   + LA+     A+ Y  +R   G     QP+     M   IA  A+
Sbjct: 224 IEILNEGRIGIAAQMLGLAQGAFEKAVPYTYQRQQFG-----QPIGTFQGMAFQIAQAAI 278

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I +A  +++  A   +E K+ ++EAA A       KYW   +A  V  +A+E  GG G+
Sbjct: 279 EIESARLMTYNAARRKEEGKTFTKEAAMA-------KYWSSVVAQRVSGQAIEWAGGVGF 331

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             E  I +++R+S   +I  G+ N  +  +   ++K
Sbjct: 332 TRETGIEKYWRDSKIGAIYEGTSNIQLQTISKFIQK 367


>gi|317419510|emb|CBN81547.1| 'Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial ' [Dicentrarchus labrax]
          Length = 432

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 28/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++ +K  D  Y ++G K W  ++  +  F+++A V+   G     C
Sbjct: 174 LSEAEAGSDAFALKTRAEKHKD-YYIINGSKMWISNAEHAGVFLVMANVDPSAGYRGITC 232

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V     D    GL   + +NK+G R+++T  L F N     + + N+        K  
Sbjct: 233 FIV-----DQDTEGLEICKKENKLGLRASSTCPLNFDNV---KVPEKNILGQIGHGYKYA 284

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y R+R   G  + D   M+  IA +A  I AA
Sbjct: 285 IGMLNEGRIGIAAQMLGLAQGCFDNTIPYTRQRVQFGKRIFDFQGMQHQIAHVATQIEAA 344

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA  A       KY+C ++A    ++ +E +GG G+ ++  
Sbjct: 345 RLLTYNAARLKEAGRPFIKEACMA-------KYFCAELATLTTSKCIEWMGGVGFTKDYP 397

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I ++YR+    +I  G+ N  +  +   ++K
Sbjct: 398 IEKYYRDCKIGTIYEGTTNVQLSTMAKFIDK 428


>gi|15964287|ref|NP_384640.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307307024|ref|ZP_07586763.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15073464|emb|CAC45106.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306901964|gb|EFN32563.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 598

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 83/416 (19%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   +    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPNGDGSYRISGQKIFISAGEHDMAENVVHLVLARIEGAPDGVKGISLFI 231

Query: 258 VPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+       E G  NG+    +++K+G   NAT  + +    G+L+G  N         
Sbjct: 232 VPKFKLDASGEPGERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355
            + + ++ A ++V    +S+AE     A  YAR     R +SG          +I  P +
Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAASYARERIQGRSLSGPKAPDKKADPIIVHPDI 346

Query: 356 KRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I             TAL   +A+  D  + R        +M PI K        
Sbjct: 347 RRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSEEERQTADDILSLMTPILKGVLTDKGF 406

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A +  GG GYIEE  ++++ R++    I  G+     LD++     G  L     
Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAM--- 458

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
                   + G+ V+ + ++    C+E++G      EK++  + A    + G+ND+
Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRG-----DEKLSGYTKA---LKKGLNDL 498


>gi|225873978|ref|YP_002755437.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225793527|gb|ACO33617.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 383

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 35/298 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   R+Y      P+  T +A    L+E   G+D  A+ ++ +   D  Y L+G K 
Sbjct: 103 WGNEQQKRKY-----LPLLATEMAGAYALSEASSGSDAFALQTRAELRGDH-YHLNGQKL 156

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF- 291
           W  ++  +  FI+ A V+   G   +   L D    G    + ++K+G R+++T EL F 
Sbjct: 157 WITNAKEAGVFIVFASVDLAAGYKGITAFLVDRDAPGFSLGKKEDKLGIRASSTCELIFE 216

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
                  N  G +     ++ G + + +I          +    + LA+     A  YA+
Sbjct: 217 DCRVPAENVLGEVGKGYKIAIGTLNEGRI---------GIGAQMLGLAQGAWNCAARYAK 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D   ++  IA +A++I A   L +  A   D  K   +EAA A       
Sbjct: 268 ERKQFGKAIADFQGVQFQIAQMAVEIEATRLLVYNAARLKDAGKDFVKEAAMA------- 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           KY+  + A  V ++A+E  GG G++++  + + YR++    I  G+ N  +  +  L+
Sbjct: 321 KYFASQTAERVASQAVEIYGGYGFVKDYPVEKFYRDAKIGKIYEGTSNMQLATIAKLM 378


>gi|149913216|ref|ZP_01901750.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
 gi|149813622|gb|EDM73448.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
          Length = 576

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 158/346 (45%), Gaps = 61/346 (17%)

Query: 151 LMSPSVTSASMVALMTTPRV-----------HKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +MS +  +  ++ LMT  ++            + + PK+ S E++ T             
Sbjct: 114 MMSSACLALQIIPLMTQGQIDALEHHASDALKRTYLPKLVSGEWNGT------------- 160

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRV 253
           + LTE + G+D+ A+T++ +   DG Y ++G K ++S   +D       ++LA++ +G  
Sbjct: 161 MNLTEPQAGSDVGALTTRAEPRGDGTYAITGQKIYISWGDNDFTDNVVHLVLARLPDGPP 220

Query: 254 GC-----FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G      FLVP+ L D     G  N L    +++K+G   + T  +++    G+L+G  +
Sbjct: 221 GTKGISLFLVPKFLPDEHGKPGRANDLKVVGVEHKMGLHGSPTCTMQYDGATGWLVGREH 280

Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI--LI 350
                 + M+ +   +++A + V G  + +AE     A+ YA  R      V GG   ++
Sbjct: 281 ------DGMRAMFTMMNNARLGVGGQGIGVAEAALQHALAYATDRKQGRTPVEGGTGAIV 334

Query: 351 DQPVMKRAIADIALDI--AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           D   ++R +  +  DI  A A AL+  +A   + A    + +A A  + PI K +     
Sbjct: 335 DHADVRRMLTTMKADIFAARAIALACAVAIDMETATGAPDWSARAAFLTPIAKAFGTDTG 394

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             V    ++  GG G++EE   A++ R+    +I  G+     +D+
Sbjct: 395 IEVANLGVQVHGGMGFVEETGAAQYLRDVRVTAIYEGTNGIQAMDL 440


>gi|301168211|emb|CBW27800.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Bacteriovorax marinus SJ]
          Length = 572

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 41/337 (12%)

Query: 169 RVHKDW-APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           +  KD+  PK+ S E+  T             + LTE   G+D+ A  S  + + +G Y 
Sbjct: 138 KEQKDFFIPKMMSGEWGGT-------------MCLTEPGAGSDVGACKSTAKPLDNGKYA 184

Query: 228 LSGHKWFLSSPMSDAF-----IMLAQV----EGRVG--CFLVPRL-LEDGSPNGLCYQRL 275
           +SG K F+SS  SD +     ++LA+     EG  G   F+VPR   E G  N +   ++
Sbjct: 185 ISGVKIFISSGESDLYENNIHLVLAKTPGAAEGTKGLSLFIVPRFNTETGESNNVVCTKI 244

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSG-MRVSLA 333
           + K+G   +AT EL F    G  +G+L       + +M I++     +  + G  + +LA
Sbjct: 245 EEKMGIHGSATCELTFGEN-GECVGELIGEEFEGMANMFIMMNEARLLCGLQGEAQANLA 303

Query: 334 EAI--HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEA 390
             +   YA+ R   G  + + P ++R +  +        AL+    N FD EAK     A
Sbjct: 304 YMLTEQYAKERAQFGVEICNLPDVRRLLLRMRALSRGMRALTIYTGNLFDKEAKGDEVAA 363

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K +C      V  +A++  GG G+  E  + +  R++   SI  G+    
Sbjct: 364 KEIALLTPICKAYCSDQGFNVSVDAVQVHGGYGFCTEYGVEQFIRDTKIASIYEGTNGIQ 423

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
            +D +           ++     Q   + GKK+  I+
Sbjct: 424 AIDFVT---------RKILKDKAQTFFAVGKKIQAIM 451


>gi|187929709|ref|YP_001900196.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187726599|gb|ACD27764.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 593

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 38/322 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           APM +      + LTE + G+D+AA+ S+     D  Y +SG+K F++    D       
Sbjct: 151 APMVEGRWTGTMNLTEPQAGSDLAALRSRAVHEGD-HYHVSGNKIFITWGEHDMAENIVH 209

Query: 244 IMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF 291
           ++LA+       V+G +  FL P+ L  +DG+    N L    +++K+G   + T  + F
Sbjct: 210 LVLARLPDAPPGVKG-ISLFLCPKYLVNDDGTLGERNDLACTSIEHKMGIHGSPTASMSF 268

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            ++    G+L+G+ +     +  M     L+  +  V     +   A  YA  R V G  
Sbjct: 269 GDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGISERAYQRARAYALER-VQGKP 327

Query: 349 LID-------QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARI 395
           LI         P ++R + D+     A  AL++  A   D      +A+ R++  A   +
Sbjct: 328 LISGSTAIAGHPDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHADAQERAQAQALVGL 387

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K WC   A  + ++ ++  GG GY+EE   ++H R++   +I  G+      D++
Sbjct: 388 LIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGASQHMRDARITTIYEGTTGIQANDLI 447

Query: 456 N--LLEKGTNLFEQLFSTLEQD 475
              L  +G    + L   ++ D
Sbjct: 448 GRKLAREGGRTLKALLGRIDGD 469


>gi|326402155|ref|YP_004282236.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325049016|dbj|BAJ79354.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 596

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 64/390 (16%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++  + VAL    +    K W P I S ++  T             + LTE   GT
Sbjct: 125 LYPGLSHGAYVALKHSGSEEQKKAWLPNIVSGKWTGT-------------MCLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257
           D+  + ++     DG Y ++G+K F+S+   D       ++LA+       V+G +  FL
Sbjct: 172 DLGMLRTKAVPNDDGTYSITGNKIFISAGEHDLAENIVHLVLARLPDAPAGVKG-ISMFL 230

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  EDG+    NG+    +++K+G   +AT  + F    G+L+G+ N     +  M
Sbjct: 231 VPKFLPREDGTLGPRNGMQCTAIEHKMGLNGSATCAMSFDGATGWLVGEPNKGLAAMFKM 290

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK--- 356
                L   I  +    V+   A+ YAR R     ++G          IL+   V +   
Sbjct: 291 MNTERLSVGIQGLGIAEVAYQNAVAYARERIQGRSLTGTKAPEKQADPILVHPDVRRMLL 350

Query: 357 --RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             RA  +    +A   A    +    D+  ++     +A +M P+ K     +   + + 
Sbjct: 351 TSRAYIEGCRALAGWVARELEILEKSDDGDAKQAADDFASLMTPVVKAMFTDLGFEIASL 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A++  GG GYI +  I ++ R++    +  G+     LD++                L Q
Sbjct: 411 AVQTYGGHGYIRDHGIEQYVRDARIAMLYEGTNGIQALDLVG-------------RKLPQ 457

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFL 504
           D G    + +  + + I   +++  LA FL
Sbjct: 458 DGGRLLTRFLDPVLEFIDAHQDNDALAEFL 487


>gi|118589350|ref|ZP_01546756.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118438050|gb|EAV44685.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 598

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 179/424 (42%), Gaps = 75/424 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL    T    + + P + +  +  T             + LTE   GT
Sbjct: 126 MYPGLTAGAVAALTIHGTDEQKQTYLPNMIAGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  I ++    +DG Y ++G K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGLIRTKAVPQADGSYKITGTKIFISAGQHDMAENIIHLVLARIEGAPEGTKGISLFVV 232

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           PR  + +DG+    NG+    +++K+G   NAT  + + +  G+L+G+ N     +  M 
Sbjct: 233 PRNAIGDDGTVGDNNGVSCGSIEHKMGIHGNATCVMNYDDATGWLVGEENKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355
               L  A+  +S   V+   A+ YA+     R ++G    D+P              + 
Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVTYAKDRIQGRALTGPKAPDKPADPIIVHPDVRRTLMQ 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            R+  + A  +   TAL   +++  D+ KS+        +M P+ K        A    A
Sbjct: 353 IRSFNEAARALIIWTALHGDVSHRSDDEKSKQFSDDMMGLMTPVLKGVLTDTGFANAVNA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GYI E  + +  R++    I  G+     LD++     G  L           
Sbjct: 413 QQLYGGHGYISEWGMEQFVRDARIAMIYEGANGIQALDLV-----GRKL----------- 456

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI--ADVFLENR 533
             + G+ V++   +  +  KE+K       +  ALA+  A L + GM+D+  A ++  N 
Sbjct: 457 PANGGRAVMSFFNEVNTFLKENK-------DNEALAAFTAPL-KKGMDDLQAATMWFMNN 508

Query: 534 FLDN 537
            + N
Sbjct: 509 AMKN 512


>gi|170752125|ref|YP_001758385.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658647|gb|ACB27702.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 595

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 171/425 (40%), Gaps = 82/425 (19%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +M AL+      +   + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAMAALLVHGSEEQKALYLPKMVEGAWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y ++G K F+S+   D       +++A++EG       +  F+V
Sbjct: 173 DLGLLKTKAVPNGDGSYSITGTKIFISAGEHDLAENIVHLVIARIEGAPAGTKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ NG+    L++K+G   NAT  + +    G+L+G  N     +  M 
Sbjct: 233 PKFLVNADGSLGARNGVSCGSLEHKMGIHGNATCVMNYDGATGWLVGQENRGLNAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L   +  +    V+   A  YA+ R              +   +I  P ++R +  
Sbjct: 293 NEARLAVGVQGLGQSEVAYQNAAAYAKDRLQGRALTGAKAPEKAADPIIVHPDVRRTLMQ 352

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + AA      TAL   + +  ++AK R     +  +M P+ K        A   EA
Sbjct: 353 IRAFNEAARALMLWTALQADILHRSEDAKERQAADDHLGLMTPVVKGVFTDRGFANAVEA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            + +GG GYIEE  +++  R++    I  G+     +D++                L +D
Sbjct: 413 QQLLGGHGYIEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459

Query: 476 LGSSGKKVITILRDSISLCK---EDKGLARFLTEKIALASSAAALYRAGMNDIADV---F 529
               G+ ++T L +  +  K   ED  +A F               +AG+ND+       
Sbjct: 460 ---GGRAMMTFLGEVQTFLKDHGEDPAMAPFTKP-----------LQAGLNDLQGAVMWL 505

Query: 530 LENRF 534
           ++N F
Sbjct: 506 MQNAF 510


>gi|83941290|ref|ZP_00953752.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
 gi|83847110|gb|EAP84985.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
          Length = 593

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE   GTD+  + ++     DG Y ++G K F+SS    M+D  I  +LA++EG   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQKIFISSGEHDMADNIIHLVLAKIEGGPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  EDGS    N +    ++ K+G   N+T  + +    G+LLGD +
Sbjct: 221 GIKGVSLFIVPKFMVKEDGSLGARNAVSVGSIEEKMGIHGNSTCVMNYDGAVGYLLGDEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351
                +  M     +   +  ++   V+   A+ YA+ R     V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARVGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGTEHPDKPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409
            P ++R++ +    +  A A     A+  D A    ++ A     +M P+ K +   +  
Sbjct: 341 HPDIRRSLMEQKSFVEGARAFILWGASLIDAAHRADDKDADGLVSLMTPVIKGFLTDIGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +A +  GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 401 DMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447


>gi|218778890|ref|YP_002430208.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760274|gb|ACL02740.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 39/350 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+  +   DG Y +SG K F+S     +++  I  +LA++EG     
Sbjct: 163 LTEPEAGSDVGALTTTAKPNGDGTYSISGTKIFISGGEHDLTENIIHPVLARIEGAPAGT 222

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             +  F VP++   +DGS    N +   R++ K+G   + T  L         G LLG+ 
Sbjct: 223 AGISLFAVPKIWVNDDGSLGEDNDVVCDRIEEKMGIHGSCTCVLTLGGKGKCKGTLLGEE 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------I 350
           N     +  M     L   +   S    +   A+ Y R+R     +L            I
Sbjct: 283 NKGMRAMFQMMNEARLGVGLQGFSMASCAYMYALDYTRQRKQGKNLLEFANPDAQSVTII 342

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
           + P ++R +  +   I    +  + + N FD+ K+   E    +      ++ P+ K +C
Sbjct: 343 NHPDVRRMLMTMKAYIDGMRSFLYFVGNCFDKHKTAGNEEEAEKYMNLIEVLIPVIKAYC 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGT 462
              A  V + A++  GG GY +E  + +  R++    I  G+     +D+L   L  KG 
Sbjct: 403 TDRAFDVCSLAVQSYGGYGYTKEYPVEQLLRDTKITCIYEGTNGIQAMDLLGRKLGMKGG 462

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
             F +L   + Q +  + +  +  L   +       G    L  K A++ 
Sbjct: 463 KPFMELMGVMMQTVAEAKEAGLEDLAAKVEAAVNGAGEIAMLMGKTAMSE 512


>gi|254247246|ref|ZP_04940567.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124872022|gb|EAY63738.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 595

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271
           +SG K F+SS    MS   I L         Q    +  F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454


>gi|315182695|gb|ADT89608.1| hypothetical acyl-CoA dehydrogenase [Vibrio furnissii NCTC 11218]
          Length = 384

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T      + PK+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFATADAKAQFCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K+SDG Y LSG K F+S    +D  +++A+  G  G   +   +     +G+ Y R +
Sbjct: 140 ATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVVPAQADGITYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F         LLG+     G    MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRSVTFDKVHVPASALLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D    +     
Sbjct: 256 LNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKLDRGDPQ----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V   A++  GG GYI+E  + RH+R+   + IL G+   M 
Sbjct: 311 -ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369

Query: 452 LDVL-NLLEKGTNLF 465
           L V   LL  G  L 
Sbjct: 370 LIVARRLLSDGGELL 384


>gi|289582756|ref|YP_003481222.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532309|gb|ADD06660.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 383

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 131/259 (50%), Gaps = 24/259 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRV 253
           G  ++E   G+D+++++++ +K  D  + ++G+K W  +  + D F++L +     +GR 
Sbjct: 121 GAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGTVGDFFVVLCKTNPDAQGRY 179

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM 312
             F   +++ +   +G   +++  K+G R++ T EL F +     + + N V T     M
Sbjct: 180 NGF--SQIIVESDRDGFSAEKITGKLGIRASDTAELVFDDV---RVPEENLVGTKDAAFM 234

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + + + D    +V+   V +A+     A+ YA+ R   G  + +   ++  +A++A D  
Sbjct: 235 QQMQFFDETRTAVAAQGVGIAKGATRAALEYAQDREQFGQSISEFQAIQHKLAEMATDTE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+++ A + D+    ++       +A + K +  ++A  V  EA++  GG+GY+ +
Sbjct: 295 AARNLTYKAAWNVDQGNDITK-------LASMAKEYASRIAVDVADEAVQIHGGAGYVND 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R YR++    I  G+
Sbjct: 348 FPVERLYRDAKITQIYEGT 366


>gi|239817691|ref|YP_002946601.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804268|gb|ACS21335.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 376

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE + G+D +++ +  +K  DG Y + G K F++S  +    ++  V     G+ G   
Sbjct: 123 LTEPQAGSDASSLRTTARKDGDG-YVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           F+VP         G    RL++K+G  S+ T ++ F        N  G       ++ G 
Sbjct: 182 FIVPT-----DAPGYSVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGA 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I   S  M+ S   V+LA    YA+ R   GG + DQ  +   +A+ A  + A
Sbjct: 237 LEGGRIGIAAQSVGMARSAFDVALA----YAKERQAFGGAIFDQQAVGFRLAECATQLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  D  +   +EAA A++ A        +MA  V + A++ +GG GY+ + 
Sbjct: 293 ARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAIQTLGGYGYVNDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PLERIYRDVRVCQIYEGTSD 365


>gi|170693737|ref|ZP_02884895.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170141519|gb|EDT09689.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 596

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 59/373 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAENIAHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLINEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ VS        A A    + R V G       +I+ P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVGVSDRAYQKAAAYAKERVQSRPVDGSAKQPVAIIEHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           ++ +     A+ AL++  A   D       EAK R+E  A    + PI K W  + +  V
Sbjct: 348 LSTMRALTEASRALAYVAAGHCDIAHRHPDEAK-RAEHQAIYEFLVPIVKGWSTESSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
            +  ++  GG G+IEE   A++YR++    I  G+      D++    +  G  + + L 
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLL 466

Query: 470 STLEQDLGSSGKK 482
           +++ + +G  G +
Sbjct: 467 ASVAETVGLLGAQ 479


>gi|13474682|ref|NP_106251.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025437|dbj|BAB52037.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 596

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 166/412 (40%), Gaps = 75/412 (18%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++T  T      W PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  + ++     +G Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGLLRTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFI 231

Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+   D  G+P   N L    ++ K+G   N+T  + +    G LLG+ N     +  M
Sbjct: 232 VPKFKLDASGNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKR--- 357
                L   +  +S   ++   A+ YA+     R +SG    D+        P ++R   
Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVAYAKDRLQGRSLSGAKAPDKKADPIIVHPDIRRSLM 351

Query: 358 ---AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
              A  +    +A  TA+   +A+   + K R     Y  +M P+ K             
Sbjct: 352 TMKAFNEAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVM 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYIEE  +++  R++    I  G+     LD++                  +
Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454

Query: 475 DLGSSGKKVI-TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            LG +G + I    ++    C+E++       EK+A  +      + G+ND+
Sbjct: 455 KLGLNGGRAIQAFFKEVGEFCEENRA-----DEKMAPFTKG---LKKGLNDL 498


>gi|86750378|ref|YP_486874.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86573406|gb|ABD07963.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 379

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 125 LAITEPSGGSDVANLRTSAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL   +LK K+G  ++ T  L F N     G LLG           M I++
Sbjct: 184 LLLIPGDTPGLTRTQLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGF-----MIIMM 237

Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  ++     ++  +V L EA  YA++R   G  L    V++  + D+A  IAA+ A
Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATAYAKQRVTFGKPLTKHQVIRHKLVDMAQRIAASQA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA   ++ +S   E    +  A  T  +C        +EA++  GG+G++    + 
Sbjct: 298 MLELLAWRVEQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGFMRGVKVE 350

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE   N+I  G+   M
Sbjct: 351 RIYREVKVNAIGGGTEEIM 369


>gi|260770186|ref|ZP_05879119.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
 gi|260615524|gb|EEX40710.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
          Length = 384

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T      + PK+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFATAEAKAQFCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K+SDG Y LSG K F+S    +D  +++A+  G  G   +   +     +G+ Y R +
Sbjct: 140 ATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVVPAQADGITYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F         LLG+     G    MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRSVTFDKVHVPASALLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D    +     
Sbjct: 256 LNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKLDRGDPQ----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V   A++  GG GYI+E  + RH+R+   + IL G+   M 
Sbjct: 311 -ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369

Query: 452 LDVL-NLLEKGTNLF 465
           L V   LL  G  L 
Sbjct: 370 LIVARRLLSDGGALL 384


>gi|260549873|ref|ZP_05824089.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407123|gb|EEX00600.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 607

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + + +  +LA+   +A +R ++AA+           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456


>gi|237785180|ref|YP_002905885.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758092|gb|ACR17342.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 391

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           + +TE   G D+A I +  +K +DG Y ++G K F+S+ +   F ++  V    +GR G 
Sbjct: 130 IAMTEPGAGADLAGIRTLAKKDADGNYIVNGAKTFISNGVQADFTIIVAVTDPEKGRAGV 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            L+  ++EDG         LK K+G ++  T EL F N       LLG+     G +   
Sbjct: 190 SLL--IVEDGMEGYTKTGPLK-KVGLKAQDTAELSFENVTVPAENLLGEEGAGFGYLRHN 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ SV+  R +      +++ R   G  L+D       +A++A  I AA + 
Sbjct: 247 LAQERLSIAVGSVATSRRAFDLVYQHSQDRKTFGKRLVDHQAYGWMLAEMATKIQAAQSF 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                ++  EAK + E        A + K+W   +   V+  A++  GG G++ E  IA 
Sbjct: 307 ----VDACIEAKVKGE---LDETTAAMAKWWTTDLQVEVVNNALQMHGGYGFMMEYPIAT 359

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
           HY ++    I  G    M   +   L KG
Sbjct: 360 HYLDTRVQPIYGGPNEIMKEIIARRLAKG 388


>gi|124009420|ref|ZP_01694097.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Microscilla marina ATCC 23134]
 gi|123984968|gb|EAY24926.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Microscilla marina ATCC 23134]
          Length = 604

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 51/371 (13%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFS 180
           SFE   ++    + AA   +M+    G +M   +T  SA ++A   +  + + +  K+ S
Sbjct: 96  SFEHGGQQLPQMVTAASGAIMSAANNGVVMFTGLTAGSAHLIASFGSKELKEKYTGKMLS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+ ++ I S       G Y L G K F+SS   
Sbjct: 156 SEWQGT-------------MALTEPQAGSSLSDIVSSATPTDQGHYKLKGQKIFISSGDY 202

Query: 241 DA-----FIMLAQVEGR------VGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNA 285
           +       +MLA+++G       +  F+VP+L ED +     N +    + +K+G +S  
Sbjct: 203 EGTENVVHLMLARIDGAPLGTKGISLFVVPKLREDENGNLIDNDVTTAGVYHKMGQKSTP 262

Query: 286 TVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            V     +  N  G+L+G+ N     +  M     L   +M  +    +   ++ YA  R
Sbjct: 263 AVHYIAGDNDNCHGWLVGEPNKGLSYMFQMMNEARLGVGLMGAAIASAAYYASLEYANER 322

Query: 343 HVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                I            +I+   +KR +      +    +L F  +   D   +  +E 
Sbjct: 323 PQGRKISEQSAKDKPQTFIINHADVKRMLLFQKSVVEGGLSLIFECSRYADLEMTTEDET 382

Query: 391 AYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           A  R      ++ P+ K +  +     ++E M+C+GG GY  +  + +HYR+    SI  
Sbjct: 383 ARKRYKGLLDLLTPVAKTFPAEYGIKSVSEGMQCLGGFGYTTDFPLEQHYRDIRITSIYE 442

Query: 445 GSGNAMVLDVL 455
           G+     LD+L
Sbjct: 443 GTTGIQSLDLL 453


>gi|126643126|ref|YP_001086110.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 567

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 86  MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 133 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 192

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 193 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 253 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 312

Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + + +  +LA+   +A +R ++AA+           PI K +  ++     
Sbjct: 313 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 372

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 373 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 416


>gi|134296918|ref|YP_001120653.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134140075|gb|ABO55818.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 595

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271
           +SG K F+SS   D       ++LA++    +G  G   F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454


>gi|169632319|ref|YP_001706055.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|184159630|ref|YP_001847969.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|239503267|ref|ZP_04662577.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|332876115|ref|ZP_08443899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169151111|emb|CAO99775.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
 gi|183211224|gb|ACC58622.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509540|gb|ADX04994.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519560|gb|ADX93941.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735733|gb|EGJ66776.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 607

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTAEGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + + +  +LA+   +A +R ++AA+           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456


>gi|169794563|ref|YP_001712356.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213158866|ref|YP_002320864.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482151|ref|YP_002324333.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260556995|ref|ZP_05829212.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|332856626|ref|ZP_08436235.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868656|ref|ZP_08438303.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147490|emb|CAM85351.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|193078500|gb|ABO13508.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
 gi|213058026|gb|ACJ42928.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988651|gb|ACJ58950.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260409601|gb|EEX02902.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|332727019|gb|EGJ58509.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733228|gb|EGJ64423.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 607

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + + +  +LA+   +A +R ++AA+           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456


>gi|113866489|ref|YP_724978.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113525265|emb|CAJ91610.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 595

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 59/346 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP + + + PK+ S  +  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVG------CFLV 258
           D+  + S+ +  +DG Y +SG K F+S+   D       ++LA++    G       F+V
Sbjct: 174 DLGILRSKAEPQADGSYLISGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVV 233

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N          
Sbjct: 234 PKFIPDANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353
           + + +++A + V    + L E     ++ YA+ R     ++G    D+P           
Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSLAYAKDRLQMRALTGPKAPDKPADPIIVHPDVR 348

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++A A+     +  TAL      S  +   R +      ++ P+ K +    A  
Sbjct: 349 RMLLTQKAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              E M+  GG GYI E  + ++ R++  N I  G+     LD+L 
Sbjct: 409 STNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQALDLLG 454


>gi|239834346|ref|ZP_04682674.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239822409|gb|EEQ93978.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 656

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 185 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 231

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +      DG Y +SG K F+S+    MS+  I  +LA+++G       +  F+V
Sbjct: 232 DLGLLRTSATPQEDGSYKISGQKIFISAGEHDMSENIIHLVLARIDGAPEGVKGISLFIV 291

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   NAT  + +    G+L+G+ +     +  M 
Sbjct: 292 PKFILDENGNPGERNGVSCGSIEEKMGIHGNATCVMNYDEAKGYLIGEAHKGLRAMFTMM 351

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361
               L  A+  +S    +   A+ YAR     R +SG    D+        P ++R + +
Sbjct: 352 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAAAPDKKADPIIVHPDIRRNLMN 411

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
           I     A  AL    A + D A    +EA          ++ P+ K             A
Sbjct: 412 IRAFNEAGRALILWTALNSDIAHRSGDEAERQTADDLVGLLTPVLKGVLTDKGFEHAVMA 471

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE  ++++ R++    I  G+     LD++
Sbjct: 472 QQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 511


>gi|323136899|ref|ZP_08071979.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397660|gb|EFY00182.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 597

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 149/341 (43%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+T  +    + +APK+    +  T             + LTE + GT
Sbjct: 126 MYPGLTQGALAALLTHGSDEQKRLYAPKMTEGRWTGT-------------MNLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  +T++    +DG Y ++G K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGLLTTKAVPRADGSYSITGQKIFISAGEHDLAENIIHLVLARIEGAPAGVKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P++L +     G+ NG+    ++ K+G   NAT  + +    GFL+G+ N     +  M 
Sbjct: 233 PKILVNPDGSLGARNGVACGSIEEKMGIHGNATCVMNYDGAQGFLVGEANRGLNAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIAD 361
               L  A+  +S   V+   A+ YAR R     +            +I  P ++R + +
Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVAYARERLQGRALTGPKNPGKNADPIIVHPDIRRMLLE 352

Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I      A  +A A AL   +A+  D+  +R        ++ P+ K     +      +A
Sbjct: 353 IRSFNEAARGLALAAALDSDIAHRSDDPAARQAAEDRLGLLTPVLKGVFTDVGFDNAVKA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG GYI E  + +  R++    I  G+     LD++ 
Sbjct: 413 QQVFGGHGYIREWGMEQFVRDARIAMIYEGANGIQALDLVG 453


>gi|160898202|ref|YP_001563784.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363786|gb|ABX35399.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 596

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 45/294 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + G+D+  + SQ +   DG Y L G K F+S     MS+  + L         A  
Sbjct: 172 LTEPQAGSDLGLLRSQARPRGDGSYSLDGSKIFISGGDQDMSENIVHLVLARLPDAPAGT 231

Query: 250 EGRVGCFLVPR-LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G +  FL PR + +DG    PN +    ++ K+G + +AT  + F     +L+G  +  
Sbjct: 232 RG-LSLFLAPRGIPQDGGGFLPNAIHCDGIEKKMGIKGSATCAMRFEGAQAWLVGQPHQG 290

Query: 306 TGPVEDMKILIYLDSAIMSV-------SGMRVSLAEAIHYARRRHVSGGILID------- 351
                   + + ++SA + V       + M   LA A    RR+  +     D       
Sbjct: 291 LA-----AMFVMMNSARLHVGLQGLGHAEMAWQLARAYAAERRQMRAQPRPADAQGPADP 345

Query: 352 ---QPVMKRAIADIAL------DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              QP ++R +AD+ +       IA   A    LA    +A+ R++  A A ++ P+ K 
Sbjct: 346 IALQPAVQRMLADLRVWTEGMRAIAGWVAHQLDLAEQAPDAEERAQAHALASLLTPVVKS 405

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  +   A+ +EA++  GG GY+ E  I +  R++    I  G+     LD+L 
Sbjct: 406 FFTERGFALASEALQVFGGYGYVHEYRIEQTLRDARIAMIYEGTNQIQALDLLQ 459


>gi|327190780|gb|EGE57849.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 598

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 51/343 (14%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   T    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILVHGTQEQKQTYLPKMVDGSWSGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  + ++    +DG Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISLFI 231

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  EDG+P   N +    +++K+G   NAT  + +    GFL+G  N     +  M
Sbjct: 232 VPKFLVGEDGAPGTRNAVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMFVM 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----GI---------LIDQPVMKRAI 359
                L   +  ++   ++   A  YAR R + G    G+         +I  P ++R +
Sbjct: 292 MNEARLMVGLQGIAISEIAYQNAAAYARDR-IQGRALSGVKAPDKKADPIIVHPDIRRTL 350

Query: 360 ADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             I A + A       TAL   +A+   + K R        ++ PI K            
Sbjct: 351 MTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPILKGVMTDKGFDHAV 410

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            A +  GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 411 MAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453


>gi|107023656|ref|YP_621983.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116690741|ref|YP_836364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|170734083|ref|YP_001766030.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|206559277|ref|YP_002230038.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia cenocepacia J2315]
 gi|105893845|gb|ABF77010.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116648830|gb|ABK09471.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
 gi|169817325|gb|ACA91908.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
 gi|198035315|emb|CAR51190.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia cenocepacia J2315]
          Length = 595

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 47/323 (14%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191

Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271
           +SG K F+SS    MS   I L         Q    +  F+VP+ + D     G  NG+ 
Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V+
Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311

Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              ++ YA+ R     ++G    D+P              + ++A A+ A      +AL 
Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                S  +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++
Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++  N I  G+ +   LD+L 
Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454


>gi|148252257|ref|YP_001236842.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404430|gb|ABQ32936.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 379

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 23/317 (7%)

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++++A  E     +  V+++ M   +  P + +   P++ +R   P   A  + +++AI 
Sbjct: 70  MHIVASQELARAGAGGVSASLMSHSIGAPPIARAARPEVRARVL-PEILAGRKISALAI- 127

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
              TE  GG+D+A + ++  +  D  Y +SG K F++S M   +I +A   G  G   V 
Sbjct: 128 ---TEPSGGSDVANLRTKAVRDGDH-YVVSGEKTFITSGMRADYITVAVRTGGPGPSGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-L 318
            LL  G   GL   +L NK+G  ++ T  L F    G  +   N+     +  K++++  
Sbjct: 184 LLLVPGDTPGLTRTKL-NKMGWWASDTATLHFD---GCRVPIENLIGEEGQGFKLIMHNF 239

Query: 319 DSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +S  M ++       RV L +AI YA+ RH  G  L    V++  + D+A  +AA+ A+ 
Sbjct: 240 NSERMGMAASCTAFARVCLEDAIAYAKERHTFGKPLAQHQVIRHKLVDMAQRVAASQAML 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             LA   ++  +   E    +  A  T   CC       +EA++  GG+G++    + R 
Sbjct: 300 EMLAWRLEQGDNPVAEICMMKNQATQTMA-CCA------SEAVQIFGGAGFMRGIRVERI 352

Query: 434 YRESPANSILLGSGNAM 450
           YRE   N+I  G+   M
Sbjct: 353 YREVKVNAIGGGTEEIM 369


>gi|146343641|ref|YP_001208689.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196447|emb|CAL80474.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 379

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 38/371 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD+    P    L  ++   GL    +   F  V   Q  +I +++    A +  
Sbjct: 28  PFANAWDEAGEFP--RTLYTKAAEIGLLGLGFPEEFGGVAADQFMRIVSSQELARAGIGG 85

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  LMS S+  A  +A    P V     P+I S           +K S    L +TE  
Sbjct: 86  VSASLMSHSI-GAPPIARAARPEVRAKVLPEILSG----------RKISA---LAITEPS 131

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GG+D+A + ++   + DG  Y +SG K F++S +   +I +A   G  G   V  LL  G
Sbjct: 132 GGSDVANLRTKA--VRDGNHYVVSGEKTFITSGVRADYITVAVRTGGPGPAGVSLLLIPG 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324
              GL   RL NK+G  ++ T  L F N     +   N+     +  K++++  +S  M 
Sbjct: 190 DTPGLTRTRL-NKMGWWASDTATLHFDNC---RVPAENLIGEEGQGFKLIMHNFNSERMG 245

Query: 325 VSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++       RV L +AI YA+ R   G  L    V++  + D+A  +AA+ A+   LA  
Sbjct: 246 MAASCTAFARVCLDDAIAYAKERQTFGKPLAQHQVIRHKLVDMAQRVAASQAMLEMLAWR 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  +   E    +  A  T  +C        +EA++  GG+G++    + R YRE   
Sbjct: 306 LEQGDNPVAEICMMKNQATQTMAYCA-------SEAVQIFGGAGFMRGVRVERIYREVKV 358

Query: 440 NSILLGSGNAM 450
           N+I  G+   M
Sbjct: 359 NAIGGGTEEIM 369


>gi|126740571|ref|ZP_01756258.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
 gi|126718372|gb|EBA15087.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
          Length = 566

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 34/301 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ S+     DG + +SG K F+
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALASKAVPNGDGTFAVSGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVP+ + D     G  N L    L++K+
Sbjct: 197 SWGDNDFAGNVCHLVLARLPDGVPGTKGISLFLVPKYIPDESGDPGEANSLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  ++F    G+L+G  +     +  M     L      V     +  +A+ YA
Sbjct: 257 GLHGSPTCVMQFDGAKGWLVGPEHGGMAAMFTMMNNARLGVGGQGVGVAEGAYQQALTYA 316

Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R       G + D   ++R + ++  D  A+ A+    A++ D   A   +E  A A 
Sbjct: 317 TERKQGKTPSGFIADHADVRRMLMEMKADTYASRAILLACAHAIDMHTATGDAEWKARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI K +  +    V    ++  GG G+IEE   A+  R+    +I  G+     +D+
Sbjct: 377 FLTPIAKAFGTETGNRVADTGVQVHGGMGFIEETGAAQFLRDVRVTAIYEGTNGIQAMDL 436

Query: 455 L 455
           +
Sbjct: 437 V 437


>gi|297564353|ref|YP_003683326.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848802|gb|ADH70820.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 605

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 53/349 (15%)

Query: 147 EAGHLMSPS--VTSASMVALMTTPRVHKDWA-PKIFSREYDPTNKAPMQKTSVAIGLG-- 201
           E G L +P   V SA+ + L + P VH   A P   S  +   N+   +   +AI  G  
Sbjct: 100 ELGGLGAPRSLVWSAAELILGSNPAVHMYSAGPGFASILHSEGNEEQKRFAELAIERGWG 159

Query: 202 ----LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR 252
               LTE   G+D+ A  ++     DG + + G K F++S   D       ++LA+ EG 
Sbjct: 160 ATMVLTEPDAGSDVGAGRTKAVDQGDGTWHIEGVKRFITSAEQDMTENIFHLVLARPEGA 219

Query: 253 ------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298
                 +  FLVP+ L  EDGSP   NG     +++K+G +++ T EL F +     G+L
Sbjct: 220 GPGTKGLSLFLVPKYLINEDGSPGERNGAYVTNVEHKMGLKASTTCELTFGDKHPAIGYL 279

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGG-------- 347
           +GD +     +  M ++I     ++   +++ +      A+ YA+ R V G         
Sbjct: 280 VGDKHDG---IRQMFLVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGNDLAAGKDS 335

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMA 397
               +   P ++R++      + A  AL    A   D         +  +E  A   ++ 
Sbjct: 336 PKVTITHHPDVRRSLMTQKSYVEAMRALVLYTATQQDAIQIAHRTGQDATELEAMNDLLL 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           PI K    + + A++AE+++ +GGSG+++E  I ++ R++  +++  G+
Sbjct: 396 PIVKGVGSERSYALLAESLQTLGGSGFLQEYPIEQYIRDAKIDTLYEGT 444


>gi|218532360|ref|YP_002423176.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|218524663|gb|ACK85248.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 587

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++A+ ++ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DGS N L    +++K+G  ++ T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGTPEPVSAIVAHADIQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AA+  + +  A   D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           ++  GG G++EE   A+  R++    I  G+     +D++     L  G  +  Q+ S
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457


>gi|89055461|ref|YP_510912.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865010|gb|ABD55887.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 591

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 156/377 (41%), Gaps = 58/377 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y +SG K 
Sbjct: 148 YLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQKI 194

Query: 234 FLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F+S+    MSD  I  +L ++ G       V  F+VP+ L  +DGS    NG+   +++ 
Sbjct: 195 FISAGEHDMSDNIIHLVLGKITGGPEGIKGVSLFIVPKFLVNDDGSLGARNGVSCGKIEE 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   N+T  + +    G+LLG+ +     +  M     L   +  VS   V+   A+ 
Sbjct: 255 KMGIHGNSTCVMNYDEATGYLLGEDHKGMRAMFTMMNEARLGVGMQGVSQAEVAYQNALE 314

Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA+     R V+G          LI  P ++R + +       A A     ++  D A  
Sbjct: 315 YAKDRLQGRDVTGIKNPDGPADPLIVHPDIRRNLMEQKSFAEGARAFLLWGSSLIDAAHR 374

Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++ A   I  + P+ K +       +  +A +  GG GYIEE  +++  R++    I 
Sbjct: 375 GDDKDADGLISLLTPVIKGFLTDKGFDMAVQAQQVYGGHGYIEEWGMSQFARDARIAMIY 434

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     LD++                L QD G        +++       E  G+  F
Sbjct: 435 EGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLVKGFAKDNAEVDGMGEF 481

Query: 504 LTEKIALASS--AAALY 518
           LT   A +    AAA+Y
Sbjct: 482 LTPLKAASKDLQAAAMY 498


>gi|296160996|ref|ZP_06843807.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295888695|gb|EFG68502.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 595

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +  SDG Y
Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +         A A S+  A 
Sbjct: 311 AYQNSLVYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|56697753|ref|YP_168123.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56679490|gb|AAV96156.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 593

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 59/372 (15%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +AS +    T      + PK+ S E+  T             + LTE   GTD+  + ++
Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGMMRTK 178

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264
            +   DG Y ++G K F+SS    M+D  +  +LA++ G       V  F+VP+ +  ED
Sbjct: 179 AEPQGDGSYKITGQKIFISSGDHDMADNIVHLVLAKITGGPEGIKGVSLFIVPKFMVNED 238

Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+    N +   +++ K+G   N+T  + +    G+LLG+ +     +  M     L   
Sbjct: 239 GTLGARNAVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVG 298

Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369
           +  ++    +   A+ YA+ R     V+G          LI  P ++R + D       A
Sbjct: 299 MQGLAQADAAYQNALEYAKDRLQGRDVTGVKNPEGPADPLIVHPDIRRNLMDQKSFTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     A   D A    ++ A     ++ P+ K +       +  +A +  GG GYIEE
Sbjct: 359 RAFLLWGATLIDAAHRAGDKDADGLVSLLTPVIKGFLSDQGYDMTVQAQQVYGGHGYIEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             ++++ R++    I  G+     LD++                L  D    GK V+   
Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAAD---GGKHVMAFF 462

Query: 488 RDSISLCKEDKG 499
               S CKE+ G
Sbjct: 463 ELVKSFCKENAG 474


>gi|209521640|ref|ZP_03270334.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209497918|gb|EDZ98079.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 600

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 153/325 (47%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  + + + PK+ S  +  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEELKQRYVPKMISGVWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++ + S+ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLSLVRSRAEPQGDGSYRIFGTKIFITWGEHDMTENIVHLVLARTPSAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + V G+ +S     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGVQGVAISDRAYQQAVAYAKERVQSRPVDGSAKQSVTIIQHPDVRRM 347

Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           ++ +      A AL++       LA+   +  +R+   A    + PI K W  +M+  V 
Sbjct: 348 LSTMRALTEGARALAYVSAAHCDLAHRHPDELTRANHQAIYEYLVPIVKGWSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|91779709|ref|YP_554917.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692369|gb|ABE35567.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 595

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 123 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 169

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + L G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 170 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 229

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 230 PKFLVNKDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 286

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YA+ R  S  +         +I  P ++R 
Sbjct: 287 YMFIMMNAARFAVGMQGVGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 346

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +A +     A+ AL++  A   D      +  +R+E  A    + PI K W  +++  V 
Sbjct: 347 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAEHQAIYEYLVPIVKGWSTELSIDVT 406

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 407 SLGVQVHGGMGFIEETGAAQYYRDA 431


>gi|47205322|emb|CAF95757.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 383

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 28/279 (10%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           T V     L+E   G+D  ++ ++ +K  D  Y ++G K W  ++  +  F+++A V+  
Sbjct: 118 TDVIGSFCLSESEAGSDAFSLKTRAEKHKD-YYVINGSKMWISNAEHAGVFLVMANVDPS 176

Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            G     CF+V R  E     GL   + +NK+G R+++T  L F N     + + N+   
Sbjct: 177 AGYKGITCFIVDRDTE-----GLEICKKENKLGLRASSTCPLNFDNV---KVPEKNILGQ 228

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  K  I  L+   + ++   + LA+     AI Y R+R   G  + D   M+  IA 
Sbjct: 229 VGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDHAIPYTRQRSQFGKRIFDFQGMQHQIAH 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L++  A   +  +   +EA  A       KY+  ++A    ++ +E +GG
Sbjct: 289 VATQIEAARLLTYNAARLKEAGRPFIKEACMA-------KYFSAEIATLTTSKCIEWMGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G+ ++  I ++YR+    +I  G+ N  +  +  +++K
Sbjct: 342 VGFTKDYPIEKYYRDCKIGTIYEGTTNVQLSTMAKIIDK 380


>gi|126725190|ref|ZP_01741033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126706354|gb|EBA05444.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 592

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 151/366 (41%), Gaps = 56/366 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   GTD+  + ++     DG + +SG K F+S+   D       ++LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQDDGSFKISGQKIFISAGEHDLADNIIHLLLAKIPGGPD 220

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+   D     G+ NG    +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFNVDEDGNLGARNGAFAGKIEEKMGIHGNSTCVMNYDEATGYLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILID 351
                +  M     L  A+   +   V+   A+ YA    + R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVALQGFAQAEVAYQNAVVYANDRLQGRDVTGTKNPEGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAP 409
            P ++R + D    +  A A ++  AN  D +    ++ A+    ++ P+ K +      
Sbjct: 341 HPDIRRNLMDQKSFVEGARAFAYWAANLIDRSNRMDDKEAHGLVSLVTPVLKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A +  GG GYIEE  +++  R++    I  G+     LD++              
Sbjct: 401 ENTIAAQQIYGGHGYIEESGMSQFARDARIAMIYEGANGVQALDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS---SAAALYRAGMNDIA 526
             L QD G        +++D I   ++D+ L     E +  AS     A++Y        
Sbjct: 448 RKLGQDGGKHVMAFFALVKDFIKENEKDEILQNGFLEPLKNASKDLQTASMY-------- 499

Query: 527 DVFLEN 532
             FLEN
Sbjct: 500 --FLEN 503


>gi|329851503|ref|ZP_08266260.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328840349|gb|EGF89921.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 584

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 45/335 (13%)

Query: 154 PSVTSASMVALMT-TPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P+++  ++ A+     +  KD + P++ S E+  T             + LTE + G+D+
Sbjct: 126 PTLSQGAIEAVHAHGTQAQKDLYLPRLISGEWAGT-------------MNLTEPQAGSDL 172

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQV----EGRVGC--FLVPR 260
           AA+ ++ +   DG Y + G K F++        +   ++LA++    +G  G   FL P+
Sbjct: 173 AALAARAEPNGDGTYAIHGQKIFITWGEHGGAENIVHLVLARLPDAPKGTRGISLFLCPK 232

Query: 261 LL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L   DG P   N +    L++K+G  ++ T  + F    G L+G  +     +  M   
Sbjct: 233 FLVGSDGQPGERNRVKCVGLEHKLGIHASPTCVMAFEGAQGELIGPPHGGLAAMFTMMNA 292

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIA 367
             L      V     +  +A+ YA+ R           G  + D P ++  +A +     
Sbjct: 293 ARLAVGFQGVGVAEAAWQQAVTYAKDRKQGRSLITGQDGAAIYDHPDVRLMLAKMKAKTE 352

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA A+ F  A + D+ K   +E    R       + PI K W   +   V +  ++  GG
Sbjct: 353 AARAICFLTAAAIDQGKVAEDEDERLRAKRREDFLVPIAKAWSTDVGVEVASLGVQVHGG 412

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            G+IEE   A++YR++    I  G+      D++ 
Sbjct: 413 MGFIEETGAAQYYRDARIAPIYEGTNGIQAADLVG 447


>gi|288961576|ref|YP_003451886.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510]
 gi|288913856|dbj|BAI75342.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510]
          Length = 596

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 48/323 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++     DG + ++G K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGIIRTRAVPAGDGSFKITGTKIFISAGEHDLTENILHLVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +   DG+P   NG+    +++K+G ++++T  + F +  G+L+G+    
Sbjct: 224 RGISLFLVPKFMPNADGTPGDRNGVACGSIEHKMGIKASSTCVMNFEDATGWLVGE---- 279

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQP-- 353
             P + M+ + + +++A ++V    + LAE     A+ YAR     R +SG    D+P  
Sbjct: 280 --PHKGMRAMFVMMNAARLAVGIQGLGLAEVSYQNAVTYARERLQGRSLSGVKAPDKPAD 337

Query: 354 ------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
                       +  RA  + A  + A TA    +A    + ++R +   + ++M PI K
Sbjct: 338 PIIVHPDVRRNLLTARAFTEGARALGALTAYKLDVAEKHPDPRTRRDADEFVQLMTPIVK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
                +       A++  GG G+I E  + ++ R++    I  G+     LD++   L +
Sbjct: 398 ALFTDIGFDSANIAVQVHGGHGFIWETGVEQYVRDARICQIYEGTNGIQALDLVGRKLPQ 457

Query: 460 KGTNLFEQLFSTLEQDLGSSGKK 482
               L    F  + +D+ ++ +K
Sbjct: 458 DVGRLLRHFFHPVGRDIEAAMEK 480


>gi|332306487|ref|YP_004434338.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173816|gb|AEE23070.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 601

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 49/337 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++       +   + P++ + E+  T             + LTE   G+ +A I
Sbjct: 130 TVAAANVIKNFACQSIKDKFMPRMLTGEFTGT-------------MALTEPHAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261
           T+  +   DG Y + G K F S+    +SD  +  +LA+++G       +  F+VP  RL
Sbjct: 177 TTNAKPAGDGSYRIKGSKMFTSAGDHELSDNIVHLVLAKIQGAPPGVKGISLFVVPKYRL 236

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311
            E+  P   N +    L +K+G R   +  L F    +  G+L+G+    L      + +
Sbjct: 237 DENDQPSQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCHGYLVGEEHQGLKYMFLMMNE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364
            ++ +   +A++  +G R SL  A    + R        D+P        +KR +     
Sbjct: 297 ARLGVGFGAAMLGYAGYRHSLQYAKERTQGRVAPNNKPTDKPATIIQHGDVKRMLLAQKS 356

Query: 365 DIAAATALSF---RLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMEC 418
            +    +L F   RL +    A +  E+   A ++    P+ K W  +  P     A++ 
Sbjct: 357 YVEGGMSLCFYAARLVDDLHTAATPEEKQKTAELLDLLTPVVKAWPSEFGPKANDLAIQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +GGSGY  E  + + +R++  N I  G+     LD++
Sbjct: 417 LGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLM 453


>gi|312195699|ref|YP_004015760.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227035|gb|ADP79890.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 395

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 39/284 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W PK+ S E+  +               LTE   G+D + +T+   +  D  +
Sbjct: 111 TEEQKKTWLPKVASGEWTAS-------------FALTESGAGSDPSGLTTTAVRDGD-EW 156

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K F++ +P++D F++ A+ +        +  F+V    E G+P GL      +K+
Sbjct: 157 VINGSKRFITNAPLADVFMVFARTDPEAASSRGISTFMV----EKGTP-GLSVGPRDHKM 211

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           G     T ++ F N    +   + G+  V  G    M+ L +  +  A + V   +  + 
Sbjct: 212 GQAGAWTADVYFDNVRVPSSVLIGGEAGVGRGYATAMRCLAHGRIHIAALCVGMSQRLVD 271

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E++ YA  R   GG++    +++  IAD A D+ AA AL   +A  FD+   +       
Sbjct: 272 ESVAYAATREQGGGVIGSHQLIQGLIADSATDLYAARALVSDVAAKFDDGSDK------- 324

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           RI     KY+  +    +   A++  GGSGYI    + R YR++
Sbjct: 325 RIGPSCAKYFASEAVGRIADRAVQIHGGSGYIRGVPVERFYRDA 368


>gi|110632385|ref|YP_672593.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110283369|gb|ABG61428.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 598

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 72/412 (17%)

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIA 212
           ++SA+M ALM  P + +     I +   D   K   P     V  G + LTE   GTD+ 
Sbjct: 117 LSSANM-ALMMYPGLTQGAIAAILAHGTDEQKKTYLPRMVKGVWTGTMNLTEPHCGTDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRL 261
            + ++      G Y +SG K F+S+   D       ++LA++EG       +  F+VP+L
Sbjct: 176 LLRTKAVPNGGGSYRISGQKIFISAGEHDMAENIIHLVLARIEGAPEGTKGISLFIVPKL 235

Query: 262 -LEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            L+D      PNG+    ++ K+G   NAT  + +    GFLLG  N   G ++ M    
Sbjct: 236 KLDDAGNPAGPNGVSCGSIEEKMGIHGNATCVMNYDEAEGFLLGAEN---GGLKAM--FT 290

Query: 317 YLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQ--------PVMKRAI 359
            ++ A + V+   +++AEA +           + R +SG    D+        P ++R +
Sbjct: 291 MMNEARLGVALQGLAVAEAAYQNAANYARERLQGRSLSGAKAPDKKADPIIVHPDVRRNL 350

Query: 360 ADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             I A + A       TAL   +A+S ++ ++R     Y  +M P+ K            
Sbjct: 351 MTIRAFNEAGRALLLWTALQSDIAHSSEDEQARQLAEDYLALMTPVLKGVLTDKGFEHAV 410

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
            A +  GG GYIEE+ +++  R++    I  G+     LD++                L 
Sbjct: 411 MAQQVFGGHGYIEEQGMSQFVRDARIAMIYEGANGIQALDLVG-------------RKLP 457

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           QD G + +    I+ D    C+E +       EK+A  + A    + G+ND+
Sbjct: 458 QDGGRAVQAFFKIVGD---FCEEHRS-----DEKMAPYTKA---LKKGLNDL 498


>gi|262280256|ref|ZP_06058040.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262258034|gb|EEY76768.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 607

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADSGIGERNAVTCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRLLLT 352

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + +  + +LA+   +A +R ++AAY           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NNGMQVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIG 456


>gi|284046093|ref|YP_003396433.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950314|gb|ADB53058.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 376

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 34/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGCFL 257
           LTE   G+D  A+ ++    +D    ++G K F+++   +   I+ A+ E   G +  F+
Sbjct: 126 LTEPEAGSDAGALRTR----ADAEGRITGAKQFITTGAQAHLLIVFARDESAGGEISAFV 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           V R       +GL   R + K+G  S++T  L F  T G  LG           M+I L 
Sbjct: 182 VKR-----PASGLAVAREEEKMGLHSSSTAALTFEQTPGERLGPAGAG------MRIALG 230

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   V +A+A       YAR RH  GG +     ++  +A++  +I AA A
Sbjct: 231 TLDGGRIGIAAQAVGIAQAALDVATAYARERHAFGGPIGRFGAIQEKLAEMQTEIEAARA 290

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L++R A         + E A A++ A  + ++W          EA++ +GG GY  E   
Sbjct: 291 LTWRAARLKQAGLPHTVEGAQAKLFASRVARHWT--------GEAIQILGGYGYTREFPA 342

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R+YR++    I  G+     L +   L
Sbjct: 343 ERYYRDAKVTEIYEGTSEIQRLVIARAL 370


>gi|319795998|ref|YP_004157638.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598461|gb|ADU39527.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 376

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE + G+D +++ +  +K +DG Y + G K F++S  +    ++  V
Sbjct: 111 PLAQGQMLGAFCLTEPQAGSDASSLRTTARKDADG-YVIDGVKQFITSGKNGQVAIVIAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
                G+ G   F+VP         G    RL++K+G  S+ T ++ F        N  G
Sbjct: 170 TDKGAGKRGMSAFIVPT-----DAPGYAVARLEDKLGQHSSDTAQINFDGCRIPAENLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I   S  M+ S   V+LA    YA+ R   GG + DQ  + 
Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDVALA----YAKERQAFGGSIFDQQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+ A  I AA  L +  A+  D      +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYVNDFPLERIYRDVRVCQIYEGTSD 365


>gi|326381772|ref|ZP_08203465.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199198|gb|EGD56379.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 590

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 49/338 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++A   TP     W   +    Y  T             + L+E + G+ +A I
Sbjct: 130 TVGNANLLAKYGTPDQIDTWVRPMLEGRYFGT-------------MCLSEPQAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263
           T++     DG Y ++G K ++S    +       ++LA+  G       +  F+VP+ L 
Sbjct: 177 TTKAAPAPDGTYRITGTKMWISGGDHELTENIVHLVLAKAPGGGPGVKGISLFIVPKFLP 236

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDM--- 312
           DG+ N +    L +K+GNR      L F +          G+L+G+L+     + +M   
Sbjct: 237 DGTRNDVALVGLNHKMGNRGTTNTLLNFGDGSFGDGTGAVGYLVGELHRGLFYMFNMMNE 296

Query: 313 -KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPVMKRAIADIAL 364
            +I +   +  +  +G + SL  A    + R V           +ID P + R +     
Sbjct: 297 ARIGVGFLATALGYAGFQKSLEYAKVRTQGRPVDAKGPDVPPVPIIDHPDVMRMMLAQKS 356

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMEC 418
               A AL    A   DE ++  ++ A AR      ++ PI K W  +      + A++ 
Sbjct: 357 YAEGALALGLYCARLLDEEQTAPDDEARARAHLLLEVLTPIAKSWPSQWCLEANSLAIQV 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY  E  + + YR++  N I  G+     LD+L 
Sbjct: 417 HGGYGYTTEFDVEQFYRDNRLNPIHEGAHGIHGLDLLG 454


>gi|218961565|ref|YP_001741340.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans]
 gi|167730222|emb|CAO81134.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans]
          Length = 381

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGC 255
             LTE   G+D  AI +  QK  D  Y L+G K ++++         F M  + +G  GC
Sbjct: 122 FALTEANAGSDAGAIETTAQKEGD-YYLLNGTKQWITNGGEAGIYCVFAMTDKTKGARGC 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
                L+E G+P G  + + +NK+G R++AT EL F +       L+G     TG +  M
Sbjct: 181 SCF--LVEKGTP-GFNFGKKENKMGIRASATRELIFEDCKVPAENLIG--REGTGFITAM 235

Query: 313 KILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+       +   SV   R +   AI Y+R R   G  +     ++  +AD+A  I AA 
Sbjct: 236 KVFDKSRPMVGAQSVGVARGAFEVAIKYSRERQQFGKPISSFQGIQFMLADMATQIEAAR 295

Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL  + A   D  AK+ S+E+A       + KY+   +A  V  +A++ +GG GY++E  
Sbjct: 296 ALVMQTARMIDSGAKNYSKESA-------MCKYFASDVAMKVTTDAVQILGGYGYMKEYP 348

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 349 VEKMMRDAKILQIYEGT 365


>gi|88798867|ref|ZP_01114449.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297]
 gi|88778347|gb|EAR09540.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297]
          Length = 593

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 49/348 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  + L  T    + +  K+ S E+  T             + LTE   G+
Sbjct: 125 MYPGLSHGAMNTIELHGTDEQKETYLTKLVSGEWTGT-------------MCLTEPHCGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + S+ +   DG Y ++G K F+SS   D       I+LA++ G       +  F+V
Sbjct: 172 DLGILKSKAEPNGDGSYAITGTKIFISSGEHDMAENIVHIVLARLPGAPEGTKGISLFIV 231

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P+ L DG+ N +    +++K+G   NAT  + F    GFL+G  +     +        L
Sbjct: 232 PKFLPDGTRNDVKCGSIEHKMGIHGNATCVMNFDAAKGFLIGPEHQGLKCMFTFMNFARL 291

Query: 319 DSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKR------AIA 360
            +A+  V+   +S   A+ YA+ R              +   +I  P ++R      A A
Sbjct: 292 GTAMQGVASAELSFQGALEYAKDRLAMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAFA 351

Query: 361 DIA-LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +   + + AA+ L   +  S DEAK++ E       + PI K +  ++        ++  
Sbjct: 352 EGGRVMMHAASQLVDVVKYSKDEAKAK-EADELLSFLTPIAKAFLTEVGTEAANHGVQVY 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           GG G+I E  + +  R++    +  G+     LD+L    L+ +G +L
Sbjct: 411 GGHGFIAEWGMEQIVRDNRIAQLYEGTTGIQALDLLGRKVLMSQGESL 458


>gi|312602128|ref|YP_004021973.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169442|emb|CBW76454.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 596

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 61/328 (18%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++  L+T     +   + PK+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIETLLTAGSDGQKACYLPKLIAGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257
           D++ + ++ ++ +DG Y L G K F++     M+D  + L           V+G +  F+
Sbjct: 171 DLSLVRTRAERQADGTYKLFGTKTFITYGEHDMADNIVHLVLARTSDAPPGVKG-ISLFI 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           VP+ L   DG P   N +    +++K+G +++ T  L+F +     G L+G+ N     +
Sbjct: 230 VPKFLLGGDGLPGTRNDVDCVSIEHKLGIKASPTAVLQFGDHGGAIGELVGEENRG---L 286

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSG----GILIDQ-PVM 355
           E M   I ++SA  SV    V++AE         A    + R V G     + IDQ P +
Sbjct: 287 EYM--FIMMNSARFSVGVQGVAIAERAYQQAAAYAAERVQSRPVDGSAKQAVTIDQHPDV 344

Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           KR +  +   I  A +L++  A++ D      +A  R + A     + PI K W  +++ 
Sbjct: 345 KRMLMTMRALIEGARSLNYFAASACDIAHRHPDASVRQQYARRYEFLVPIVKGWSIELSV 404

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437
            V +  ++  GG G++EE   A+HYR++
Sbjct: 405 EVASMGVQVHGGMGFVEETGAAQHYRDA 432


>gi|254563431|ref|YP_003070526.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
 gi|254270709|emb|CAX26714.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
          Length = 587

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++A+ ++ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSALRTRAEPNGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DGS N L    L++K+G  ++ T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGLEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AA+  + +  A   D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           ++  GG G++EE   A+  R++    I  G+     +D++     L  G  +  Q+ S
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457


>gi|91781807|ref|YP_557013.1| putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia
           xenovorans LB400]
 gi|91685761|gb|ABE28961.1| Putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia
           xenovorans LB400]
          Length = 595

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +  SDG Y
Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +         A A S+  A 
Sbjct: 311 AYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|288919956|ref|ZP_06414277.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288348609|gb|EFC82865.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 609

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 170/373 (45%), Gaps = 58/373 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++     DG + + G K F++S     P +   ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRAKAIAQPDGTWHIEGVKRFITSGDWDVPENIFHLVLARPEGHGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  FLVP+ + D      G+ NG     L+ K+G + +AT EL F       G+L+GD
Sbjct: 224 KGLSMFLVPKYMPDPETGELGARNGAYVTNLEKKMGLKVSATCELRFGEREPAVGWLVGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
             V  G  +  +++ Y  +     +++ +      A+ +AR R V G             
Sbjct: 284 --VHEGIAQMFRVIEYARMMVGTKAIATLSTGYLNALDFARER-VQGADLPRSTDKSAPR 340

Query: 348 -ILIDQP------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAP 398
             +I+ P      ++++A A+    +   TA +F+ A +   A+  ++EAA     ++ P
Sbjct: 341 VTIINHPDVRRMLMLQKAYAEGMRSLVLFTA-TFQDAVALAAARGEADEAAERMNDLLLP 399

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           I K    + +  ++A +++  GGSGY+++  I ++ R++  +++  G+ +    D+    
Sbjct: 400 IVKGVGSERSYELLATSLQVFGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRK 459

Query: 457 LLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKED-----KGLARFLTEKIAL 510
           ++    +    LF  +++   G +G   +   R+ +    ED       L  FLT   A 
Sbjct: 460 IVRDQGHALTSLFGQIQEFAKGETGNGALRSEREVLGASLEDVQAMVAALVGFLT---AG 516

Query: 511 ASSAAALYRAGMN 523
           A   A +YR G+N
Sbjct: 517 AEDPAQVYRVGLN 529


>gi|311104938|ref|YP_003977791.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759627|gb|ADP15076.1| acyl-CoA dehydrogenase, middle domain protein 5 [Achromobacter
           xylosoxidans A8]
          Length = 608

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 65/332 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+T  +    K + P++   ++  T             + LTE + G+
Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRKQYVPQLIGGKWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++  K +DG Y LSG K F++     +++  I L         A V+G +  F+
Sbjct: 171 DLAQVATRAVKQADGSYRLSGQKIFITYGDHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNV 304
           VP+ L   DGS    N +    L++K+G   + T  L + +          G+L+G+ N 
Sbjct: 230 VPKFLVQADGSLGKRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEVGEGAIGYLVGEQNR 289

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGI----LID 351
               +E M   I +++A  SV    + ++E     A+ YAR R     V G      ++ 
Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERACQHALAYARERVQGRAVEGSAAAVAIVR 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +     AA A+S+  A + D+       + RS   A+   M PI K +  
Sbjct: 345 HPDVQRMLMTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRSRNRAFYEYMVPIVKGFST 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + A  V +  ++  GG GYIEE   A++YR++
Sbjct: 405 ETAVEVASLGLQVHGGMGYIEETGAAQYYRDA 436


>gi|301061625|ref|ZP_07202382.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300444262|gb|EFK08270.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 594

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/409 (22%), Positives = 171/409 (41%), Gaps = 62/409 (15%)

Query: 91  GERWDKVEFH-------PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           GE W  V+F        P + A  +    +G   +I D  +    +   H +R     LM
Sbjct: 60  GENWG-VKFEDGRVLCAPEFKAAFKDYGENGWTAAIHDPEYGG--QGFPHMMRIVINDLM 116

Query: 144 AQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M+PS+T  +A ++    +  + + + PK++  ++  T             + 
Sbjct: 117 YGAAQSFNMAPSLTRGAAHLIEAFGSEELKERYVPKMYGGQWAGT-------------MA 163

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+++AA+ S   +  D  + + G K F+S    D       ++LA++EG     
Sbjct: 164 LTESNAGSNLAALRSTAYREGDH-FKIKGSKIFISWGEHDLTENIIHLVLARIEGAPEGI 222

Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
             +  F+VP  R+  DGSP   N +    ++ K+G  ++ T  L F +     G+L G  
Sbjct: 223 KGISLFVVPKIRVNADGSPGEFNDVVCTGVEKKMGLHASPTCALNFGDNDGCIGYLCGRE 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL----------IDQ 352
           N+    +  M     ++S +  ++    +   A+ Y + R V G  L          ID 
Sbjct: 283 NMGLAHMFVMMNEARINSGVSGMTLGSTAYQNALAYTKER-VQGSDLCGRKKGYVPIIDH 341

Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R      A  D    +  A A    L+++ ++   ++        M PI K +C  
Sbjct: 342 PDVRRMLLWMKATVDGMRSMIYAGAYWDDLSHALEDGDEKTHYKNLTEFMTPIIKAYCSD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +   V   A++C+GG GY  E  + ++ R+S   S+  G+     +D++
Sbjct: 402 LGFKVCETAVQCLGGYGYCREYPLEQYLRDSKIVSLYEGTNGIQSMDLM 450


>gi|226943757|ref|YP_002798830.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718684|gb|ACO77855.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 614

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 67/367 (18%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ A+    +  +   + PK+ S E+  T             + LTE   G+
Sbjct: 148 LCPMLTQGALEAIAHHASAELQAAYLPKLVSGEWTGT-------------MNLTEPDAGS 194

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+AAI ++     D  Y +SG K F++     M+D  I L         A V+G +  F+
Sbjct: 195 DLAAIKTRAVPNGDH-YLISGQKIFITWGDHQMTDNVIHLVLARLPDAPAGVKG-ISLFI 252

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPV 309
           VP+ L D     G+ N      L++K+G  ++ T  + F       G+L+G+      P 
Sbjct: 253 VPKFLLDAQGNPGARNDAQCVSLEHKLGIHASPTCVMSFGEKEGAVGYLVGE------PH 306

Query: 310 EDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR------RRHVSGGILIDQPVMKR 357
           + +  +   ++ A  SV    +S++E     A  YAR      R+  S   +I+ P ++R
Sbjct: 307 KGLACMFTMMNHARQSVGLQGLSISERAYQQARQYARERLQGTRKDGSRFPIIEFPDVRR 366

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411
            +  +   I A  AL+   A   D      + AA AR      ++ PI K W  ++A  V
Sbjct: 367 MLLQMKASIEAMRALALVAAAEVDRVTHAPDPAAAARHQGRVDLLTPIVKGWLTELAQEV 426

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG---TNLF 465
            +  ++  GG G+IEE   ARHYR++   +I  G+     LD++    LL +G     LF
Sbjct: 427 TSLGVQIHGGMGFIEETGAARHYRDARILTIYEGTTGIQALDLVGRKTLLNRGELLAGLF 486

Query: 466 EQLFSTL 472
           +++  T+
Sbjct: 487 DEIGETV 493


>gi|114563237|ref|YP_750750.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334530|gb|ABI71912.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 601

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 150/332 (45%), Gaps = 52/332 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM++      + +TE   G+ +  + ++  K  DG Y ++G+K ++S     +SD  +  
Sbjct: 152 PMREGRFMGTMAMTEPGSGSALGDLITKAVKSDDGTYRITGNKIYISGGDHDLSDNIVHL 211

Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF-- 291
           +LA+++G       +  F+VP+ L  EDGS    N +    L +K+G R+  +  L F  
Sbjct: 212 VLARIQGAPKGVKGISLFVVPKFLLNEDGSVGEDNEVALAGLFHKMGGRAQTSTALSFGE 271

Query: 292 -SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            + + G+L+G+    L      + + +I++    A+++V+G + S    + YA+ R   G
Sbjct: 272 KNGSIGYLVGEEHCGLKYMFHMMNEARIMVGTSGAVLAVAGYQYS----VDYAKNR-PQG 326

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAY 392
            +            +I+   +KR +         A AL        D+ ++   SE+  +
Sbjct: 327 RLPSCKDPQSPMVNIIEHADVKRMLLAQKAYAEGAMALVLYGTQLSDDERTADTSEQREH 386

Query: 393 AR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A      + PI K W  +  P   + A++ +GG GYI E  +   YR++  N I  G+  
Sbjct: 387 AHTLLDFLTPIIKTWPSEYGPKANSYAIQVMGGHGYINEHPVEMFYRDNRLNPIHEGTTG 446

Query: 449 AMVLDV------LNLLEKGTNLFEQLFSTLEQ 474
              LD+      +N ++       ++  T+EQ
Sbjct: 447 IQSLDLITRKVPMNKMQGYKATLHEITKTIEQ 478


>gi|312963447|ref|ZP_07777929.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311282253|gb|EFQ60852.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 592

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 51/375 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +TS + V++ T  +  +   + PK++S E+             A  + LTE   GT
Sbjct: 127 LYPMLTSGACVSIATHASEELKAAYLPKMYSGEW-------------AGSMCLTEAHAGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++ +  +DG Y +SG K F++    D       ++LA++         +  FLV
Sbjct: 174 DLGMIRTKAEPQADGSYTVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLV 233

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + +     G+ N +    +++K+G +++AT  + F    G+L+G+ N     +  M 
Sbjct: 234 PKFMVNADGSLGARNPVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMM 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIAD 361
               L   I  ++    S   AI YAR R  S               +I  P ++R +  
Sbjct: 294 NYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQAKDKAADPIIVHPDVRRMLLT 353

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415
           +        A S  +A   D AK   + AA  R      ++ P+ K +   +        
Sbjct: 354 MKASNEGGRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLTDLGLETTVLG 413

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            +  GG GYI E    +  R+     I  G+     LD++   ++  G   +      + 
Sbjct: 414 QQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYRLFADEIR 473

Query: 474 QDLGSSGKKVITILR 488
           Q +  +G +++   +
Sbjct: 474 QFIAGAGAELVEFTK 488


>gi|114767660|ref|ZP_01446370.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114540328|gb|EAU43422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601]
          Length = 566

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 34/302 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279
           S   SD       ++LA++         +  F+VP+ L D  G+P   N L    L++K+
Sbjct: 197 SWGDSDLVENVCHLVLARLPDAAPGTKGISLFMVPKFLPDEAGNPGVANTLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  + +    G+++G+       +  M     L      V     +   A+ +A
Sbjct: 257 GLHGSPTCVMSYEGATGWIVGEPGGGMKAMFTMMNNARLGVGGQGVGAAEGAYQHALAFA 316

Query: 340 RRRHVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R         +I    ++R +A +  +I AA A++   A S D   A    E  A A 
Sbjct: 317 NERKQGKNPHDTIIGHADVRRMLATMKAEILAARAIALDCAVSIDMGRATGAPEWTARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI K +   +   V    ++  GG GY+EE   A+ YR+    +I  G+     +D+
Sbjct: 377 FLTPIAKAFGTDIGCEVSEMGVQVHGGMGYVEESGAAQFYRDVRVTAIYEGTNGIQAMDM 436

Query: 455 LN 456
           + 
Sbjct: 437 VG 438


>gi|23012171|ref|ZP_00052323.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 463

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 24/281 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++ + S+ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSGLRSRAEPHGDGSYRITGAKIYITYGEHDLADNIVHLVLARLKDAPS 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DG+ N L    L++K+G   + T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGTRNDLRCSGLEHKLGIHGSPTCSMAFGDGGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADVQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AAA  + +  A   D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 MLLTMKAYTAAARGICYLTAQGLDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G++EE   A+  R++    I  G+     +D++ 
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVT 440


>gi|13541951|ref|NP_111639.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325382|dbj|BAB60286.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 384

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 40/285 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GR---- 252
           GL +TE   G+D A I++  +K  D  Y ++G K F+S+  +SD F+  A  + G+    
Sbjct: 122 GLAITEPGAGSDAAGISTTAEKRGDK-YIINGDKIFISNGRISDFFVFDAVTDPGKRHKG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305
           +  F+V     D +  GL   R  +K+G R ++TVEL F        N  G L G   V 
Sbjct: 181 ITAFVV-----DANTPGLKISRDIHKMGIRGSSTVELVFEDMEVPAENIVGELNGGFKV- 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                   I+  LD+  + ++   + +AE     A+ Y ++R   G  +     ++  IA
Sbjct: 235 --------IMETLDAGRIGIAAQALGIAEEAFAEAMDYIKQRKQFGTTISSFEGIQFMIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I AA  L++  A  +   +   E +A A++ A         +A  V  +A++  G
Sbjct: 287 DMATEIEAARYLTYVAAEKWQHKEDTIEISAMAKLKA-------SDVAVRVTTDALQLFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           G GY  +    RH R+S    I  G+     L +   L K TN +
Sbjct: 340 GYGYTVDLDAERHMRDSKITQIYEGTNQIQRLVIAKELLKKTNYY 384


>gi|217973249|ref|YP_002358000.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217498384|gb|ACK46577.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 585

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 41/326 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK++S E+             A  + +TE + G+D+  I ++     DG Y
Sbjct: 144 SEELKQAYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQR 274
            ++G K F++    D       ++LA++    G   FLVP++    DGS    NG+    
Sbjct: 191 AITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGS 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  + F N  GFL+G+ N     +  M     L   I  +   + +   
Sbjct: 251 IEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSSQAAYQM 310

Query: 335 AIHYARRRH---VSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           A  YA+ R+    +GG         +I    ++R +  I     A  ALS       D A
Sbjct: 311 AADYAKERNQGVAAGGSPTGSESDAIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLA 370

Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           K   +E     A Y  ++ P+ K +           A +  GG GYI E  I +  R++ 
Sbjct: 371 KYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+     +D L     G NL
Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|134095998|ref|YP_001101073.1| acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133739901|emb|CAL62952.1| putative butyryl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 596

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 52/329 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  + S+ +  +DG Y ++G K 
Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAHCGTDLGLLRSKAEPQADGSYKITGSKI 198

Query: 234 FLSSPMSDAF-----IMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+   D       ++LA++    +G  G   F+VP+ L +     G+ N +    L+ 
Sbjct: 199 FISAGEHDMVQNILHLVLARLPDAPQGTHGISLFIVPKFLPNADGTLGARNPIFCGALEE 258

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT ++      G+++G  N     +  M     L   + S+    V+   A+ 
Sbjct: 259 KMGIHGNATCQMNIDGATGWMIGQPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNALL 318

Query: 338 YARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSF-RLAN 378
           YA+ R     ++G    D+P              +  +A A+     ++  AL   R  N
Sbjct: 319 YAKDRLQMRSLTGVKAADKPADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVALQIDRELN 378

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             DEA  R + A    ++ PI K +         +EAM+  GG GYI E  + ++ R++ 
Sbjct: 379 HPDEA-VRKDAADEVALLTPIIKAFLTDNGWIATSEAMQVYGGHGYIAEWGMEQYVRDAR 437

Query: 439 ANSILLGSGNAMVLDVLN---LLEKGTNL 464
            N I  G+     LD+L    LL+ G  L
Sbjct: 438 INMIYEGTNTIQSLDLLGRKILLDNGAKL 466


>gi|332994472|gb|AEF04527.1| putative acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 586

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 152/354 (42%), Gaps = 51/354 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD++ ++++ +   DG Y ++G+K F+++   D       ++LA+      
Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYKVTGNKIFITAGDQDWSSNVIHLVLARLPDAPK 221

Query: 249 -VEGRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+L+     E G PN L    +++K+G +++ T  + F +  G+L+G+ 
Sbjct: 222 GVKG-ISLFLVPKLMLDENNEPGEPNSLSVGSIEHKMGIKASPTCVMNFDDATGWLVGEE 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350
           N     +  M         +  +     S   A+ YAR R  S    GI         ++
Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPDGKADPIV 340

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA----RIMAPITKYWCC 405
            QP + R +      I  + ALS   A   D E     EE   A    + + PI K +  
Sbjct: 341 FQPDVARMLLTQKSQIEGSRALSLLYAKYMDIEKLGTDEEKENADKVLQFLTPICKAYMT 400

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            M     +  ++  GG G+I E  + +  R+     +  G+     LD++   L   G  
Sbjct: 401 DMGLETTSIGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
           + E  +    Q        ++  + D+     E+KGLA+ L +    ASSA  L
Sbjct: 461 MMEATYQAFAQ--------LVADISDA-----ENKGLAQGLLDDWR-ASSADCL 500


>gi|295696336|ref|YP_003589574.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411938|gb|ADG06430.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 382

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 22/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           LG+TE   G+D+A I ++ ++  DG + + G K F+++ P +D   ++A+     G   +
Sbjct: 126 LGITEPDHGSDVAGIETRARREGDG-WVIRGRKLFITNGPRADFITLVARTSDEPGYRGI 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G+   R  +K+G RS+ T EL F + +     LLG+           +I+
Sbjct: 185 SLFLVEMDRPGVSVGRKLDKVGMRSSDTAELVFDDVWVPAESLLGEEGKGF-----YQIM 239

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    M  +   V+ A+  H     YA+ R   G  +    V+   +A++A++I A  
Sbjct: 240 WELQGERMIAAAGAVATAQYAHELALAYAKERRQFGRPIAGFQVVSHLLAEMAVEIEACR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++ +A  F   +  S+E + A++ A  T +W       V+  A++  GG+GY+ E  I
Sbjct: 300 QLTYSVAWRFARGEVPSKEISMAKLAASQTAFW-------VVDRALQIFGGNGYMAEYPI 352

Query: 431 ARHYRESPANSILLGSGNAM 450
            R +R+   N I  G+   M
Sbjct: 353 ERLWRDVRLNRIGAGTDEIM 372


>gi|194288931|ref|YP_002004838.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|193222766|emb|CAQ68769.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 594

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKATFLPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAQNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNDDGSTGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I ++SA  SV    ++++E     A+ YAR R  S  +         +I  P +K
Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVK 345

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A+ + A  +A   A +   A+   +   R +  A+   M P+ K W  +++  
Sbjct: 346 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRRQSQAFYEFMVPVVKGWSTELSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+HYR++
Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|323524745|ref|YP_004226898.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381747|gb|ADX53838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 595

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ S  +  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFIPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +         A A S+  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453


>gi|84684409|ref|ZP_01012310.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667388|gb|EAQ13857.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 571

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 49/364 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+T++     DG + ++G K ++
Sbjct: 150 PKLTSGEWTGT-------------MNLTEPQAGSDVGALTTKAVPNGDGTFAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLL--EDGSP---NGLCYQRLKNKI 279
           S    D       ++LA++ +G  G      F+VP+ +  E+G+P   N L    L++K+
Sbjct: 197 SWGDHDMAENICHLVLARLPDGAPGTKGISLFMVPKYIPDENGNPGKANDLRVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  + +    G+++G+ +     +  M     L+  +  V     +   A+ YA
Sbjct: 257 GLHGSPTCVMSYEGATGWIVGEEHAGMAAMFTMMNNARLNVGVQGVGVAEGAYQHALAYA 316

Query: 340 RRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             R           G + D   ++R +  +  +  AA A+S   + + D A +  ++   
Sbjct: 317 LERKQGKTPIENGTGTIADFADVRRMLVQMRAETYAARAISLACSTAIDMAGATGDKGWK 376

Query: 393 AR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           AR   + PI K +       V    ++  GG GY+EE   A++YR+    SI  G+    
Sbjct: 377 ARAAFLTPIAKSYGTDTGIKVAELGVQVHGGMGYVEETGAAQYYRDVRVTSIYEGTNGIQ 436

Query: 451 VLDVL--NLLEKGT---NLFEQLFSTLE---QDLGSSGKKV---ITILRDSISLCKEDKG 499
            +D++   +++ G     L +++  T E   + LG   K V      LR++     E   
Sbjct: 437 AMDLVARKMMDGGDMAFRLLDEIEGTAEGARETLGELAKPVWEAAETLREATEWLVEQDL 496

Query: 500 LARF 503
             RF
Sbjct: 497 QTRF 500


>gi|253559433|gb|ACT32397.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens]
          Length = 598

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 121/291 (41%), Gaps = 38/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  I ++    +DG Y +SG K F+S+    MSD  I L         A  
Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L D     G+ NG+    +++K+G +++AT  L F    GFL+G+ N 
Sbjct: 224 KG-ISLFIVPKFLPDATGEAGARNGVSCGSIEHKMGIKASATCVLNFDGAKGFLIGEPNK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILID 351
               +  M     L + +  +     S   AI YA  R              V+  I++ 
Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRALTGPKAPEKVADPIIV- 341

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +        AL++  A   D A       +R E       + PI K +  
Sbjct: 342 HPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSPDETARQEAEDLLAFLTPICKAFMT 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                V    M+  GG G+I E  + +  R+     I  G+     LD+L 
Sbjct: 402 DTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG 452


>gi|330812185|ref|YP_004356647.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380293|gb|AEA71643.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 598

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 132/334 (39%), Gaps = 54/334 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  I ++    +DG Y +SG K F+S+    MSD  I L         A  
Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L D     G  NG+    +++K+G +++AT  L F    GFL+G+ N 
Sbjct: 224 KG-ISLFIVPKFLPDATGEAGPRNGVSCGSIEHKMGIKASATCVLNFDGAKGFLIGEPNK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILID 351
               +  M     L + +  +     S   AI YA  R              V+  I++ 
Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRSLTGPKVPEKVADPIIV- 341

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405
            P ++R +  +        AL++  A   D A   ++E A          + PI K +  
Sbjct: 342 HPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSADETARQEAEDLLAFLTPICKAFMT 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                V    M+  GG G+I E  + +  R+     I  G+     LD+L          
Sbjct: 402 DTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG--------- 452

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                   + LGS GK +    R     C  + G
Sbjct: 453 -------RKVLGSQGKLLRGFTRIVHKFCAANAG 479


>gi|300309596|ref|YP_003773688.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300072381|gb|ADJ61780.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 596

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 62/334 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  + S+ +  +DG Y ++G+K 
Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAHCGTDLGLLRSKAEPQADGSYKITGNKI 198

Query: 234 FLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+  +D       ++LA++    EG  G   FLVP+ L +     G+ N +    ++ 
Sbjct: 199 FISAGENDVSANIIHLVLARLPDAPEGSKGISLFLVPKFLPNADGSLGARNPIFCGAIEE 258

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-- 334
           K+G   NAT ++      G+L+G       P + ++ + +++++A + V    + L E  
Sbjct: 259 KMGIHGNATCQMNLDGATGWLIGQ------PHKGLQAMFVFMNAARLGVGMQGLGLTEVA 312

Query: 335 ---AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373
              A+ YA+ R     +SG    D+P              +  +A A+      +  AL 
Sbjct: 313 YQNALVYAKDRLQMRSLSGIKAADKPADPIIVHPDVRRMLLTAKAFAEGGRAFTSYVALE 372

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                +  + + R + A    ++ P+ K +    A    +E ++  GG GYI E  + ++
Sbjct: 373 LDKELTHPDEQVRKDSADIVALLTPVVKAFLTDNAWMATSECLQVYGGHGYIAEWGMEQY 432

Query: 434 YRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
            R++  N I  G+     LD+L    L++ G  L
Sbjct: 433 VRDARINMIYEGTNTIQSLDLLGRKILMDNGAKL 466


>gi|209515063|ref|ZP_03263932.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504689|gb|EEA04676.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 594

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 163/400 (40%), Gaps = 71/400 (17%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           LMSP +T  +   L T  + RV  +  PK+ S E+  T             + LTE + G
Sbjct: 126 LMSPGLTHGATACLQTYGSERVKTELLPKVASGEWLST-------------MCLTEPQAG 172

Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GRVGC-- 255
           +D+  I S+  +   +DG Y + G K F++    D       ++LA++     G  G   
Sbjct: 173 SDVGLIRSRATEAPGTDG-YFVDGSKIFITGGAHDLTENIVHLVLARLPDAPPGTKGLSL 231

Query: 256 FLVPRLLE-DG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           F+VP  LE DG   S NG+  + ++ K+G + + T  + F   FG+L+G+ +     +  
Sbjct: 232 FVVPEWLEGDGAGRSRNGVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLNCLFV 291

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILID---------QPVMK 356
           M     L  A+  +     +   A  YA+ R       V  G  +           P M+
Sbjct: 292 MMNAARLQVAMQGLGHAHTAWQRAHAYAQERAQMRAVSVPSGAAVASGHAAPISFHPAMR 351

Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R + ++   +    A+ +  A+  D      +A  R + A  A ++ PI K +       
Sbjct: 352 RILLELRAIVEGERAIGYWTAHWLDVAARHADAAERVQAAQLASLLTPIAKTFFTANGFD 411

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468
             + A++  GG GYI E  I +  R+S  + +  G+     +D+L   +L  G+   + L
Sbjct: 412 AASNALQVFGGYGYIHEYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGSAALDVL 471

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
                             +R    LC+E   L R    K+
Sbjct: 472 LRH---------------VRTEAQLCRESDPLVRSAGAKL 496


>gi|224370196|ref|YP_002604360.1| Acd10 [Desulfobacterium autotrophicum HRM2]
 gi|223692913|gb|ACN16196.1| Acd10 [Desulfobacterium autotrophicum HRM2]
          Length = 615

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 153/359 (42%), Gaps = 58/359 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A++V    T    + +  K+FS E+  T             + LTE   G+D+ A++S 
Sbjct: 130 AATLVEAFGTDEQKRLYMKKMFSGEWGGT-------------MLLTEAEAGSDVGALSSV 176

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--RLLED 264
            +K +DG Y ++G K F+S+   D        +LA++EG       +  FLVP  R+ +D
Sbjct: 177 AKKNADGTYSITGTKIFISAGEHDLAKNIIHPVLARIEGAPEGTRGISLFLVPKYRVNDD 236

Query: 265 GSP---NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           GS    N +    ++ K+G   NAT  L   E   + G LLG  N     +  M  ++  
Sbjct: 237 GSLGEFNNVVCTGIEEKMGLHGNATCTLSLGEKGESIGTLLGAENKG---MSAMFRMMNE 293

Query: 319 DSAIMSVSGMRVSLAE---AIHYARRRHVSGGIL------------IDQPVMKRAIADIA 363
             A + + G  VS A    A+ YAR R     IL            I+ P ++R + ++ 
Sbjct: 294 ARAFVGLQGFAVSTASYMYALDYARTRIQGKNILKARQPGVKSCPIIEHPDVRRQLLNMK 353

Query: 364 LDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             I    +L +       +A + ++ + +        ++ P+ K +    +  V +  ++
Sbjct: 354 ALIEGMRSLIYFNGKCLDIAETSEDPEQKERYGDMVELLTPLVKGYVTDRSLEVCSHGVQ 413

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474
             GG GYI+E  + +  R+S    I  G+     +D+L   L  K   LF      + Q
Sbjct: 414 VYGGYGYIKEFPVEQLMRDSRIYMIYEGTNGIQAMDLLGRKLAMKDGKLFRDFIDEIRQ 472


>gi|153000792|ref|YP_001366473.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151365410|gb|ABS08410.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 585

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++     DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++    DGS    NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + F N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           R+    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|138894835|ref|YP_001125288.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266348|gb|ABO66543.1| Probable acyl-coA dehydrogenase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 382

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 126/303 (41%), Gaps = 43/303 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK  S E             +   + +TE   G+D+A I++   K 
Sbjct: 99  IASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAGSDLANISTTAVKA 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270
            D  Y ++G K F+++ +    I++A       C   P            ++E  +P G 
Sbjct: 146 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPHAKPPHRGISLLVVERDTP-GF 196

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  +  T EL F +       LLG+       + +      L  AI + + 
Sbjct: 197 TRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
             V  + A HY ++R   G  + +   ++  +A++A DIA       R+       K   
Sbjct: 257 AEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIV 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E + A       K+W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I  G+ 
Sbjct: 317 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 369

Query: 448 NAM 450
             M
Sbjct: 370 EMM 372


>gi|163852660|ref|YP_001640703.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163664265|gb|ABY31632.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 596

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 157/389 (40%), Gaps = 62/389 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+   +P     + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M 
Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMK---- 356
               L   +  +     +   A+ YA+ R              V+  I++   V +    
Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKVADPIIVHPDVRRTLMQ 352

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA  + A  +   TAL+  +A+   +A  R        +M P+ K        A   EA
Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GY+EE  +++  R++    I  G+     +D++                L +D
Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504
            G +    +T ++  I    ED+G+  F+
Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488


>gi|126174298|ref|YP_001050447.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125997503|gb|ABN61578.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155]
          Length = 585

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++     DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++    DGS    NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + F N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           R+    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|304408833|ref|ZP_07390454.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307302836|ref|ZP_07582591.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304352654|gb|EFM17051.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306913196|gb|EFN43618.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 585

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 41/326 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK++S E+             A  + +TE + G+D+  I ++     DG Y
Sbjct: 144 SEELKQAYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQR 274
            ++G K F++    D       ++LA++    G   FLVP++    DGS    NG+    
Sbjct: 191 AITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGS 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  + F N  GFL+G+ N     +  M     L   I  +   + +   
Sbjct: 251 IEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310

Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           A  YA+ R+    +GG         +I    ++R +  I     A  ALS       D A
Sbjct: 311 AADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLA 370

Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           K   +E     A Y  ++ P+ K +           A +  GG GYI E  I +  R++ 
Sbjct: 371 KYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+     +D L     G NL
Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|187927451|ref|YP_001897938.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309779847|ref|ZP_07674602.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|187724341|gb|ACD25506.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921424|gb|EFP67066.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 595

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           LTE   GTD+  + ++ + ++DG Y ++G K F+S+   D       ++LA++    G  
Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGT 225

Query: 255 ----CFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                F+VP+ + D  G+P   N +    +++K+G   NAT  +      G+++G+ N  
Sbjct: 226 KGISLFVVPKFIPDANGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   + S+    V+   +  YA+ R     +SG    D+P        
Sbjct: 286 LNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + +RA A+     +   AL      S  +  +R + A    ++ PI K +    
Sbjct: 346 DVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKAFLSDN 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 406 AFISTNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D+G+  KK   +++D +     ++ +  F+ 
Sbjct: 455 --RKILGDMGAKMKKFGKLVQDFVEAEGTNEAMQEFIN 490


>gi|330824270|ref|YP_004387573.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309642|gb|AEB84057.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 594

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 38/311 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+AA+ S+     D  Y +SG+K F++     M++  + L         A
Sbjct: 162 MNLTEPQAGSDLAALRSRAMPEGD-HYRVSGNKIFITWGEHDMAENIVHLVLARLPDAPA 220

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299
            V+G +  FL P+ L +     G  N L    +++K+G  ++ T  + F       G+L+
Sbjct: 221 GVKG-ISLFLCPKFLANDDGTLGERNDLACTSIEHKLGIHASPTASMCFGERGGAIGYLI 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILIDQ 352
           G+ +     +  M     L+  +  V     +   A  YA  R V G       G +   
Sbjct: 280 GEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARAYALER-VQGRPALAGSGTIAGH 338

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R + D+     A  AL++  A   D      +A+ R+   A   ++ P+ K WC  
Sbjct: 339 PDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHPDAQERTRAQALVGLLTPVVKGWCTD 398

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
            A  + ++ M+  GG GY+EE   A++ R++   +I  G+      D++   L  +G   
Sbjct: 399 NALGIASDGMQVHGGMGYVEETGAAQYLRDARITTIYEGTTGIQANDLIGRKLAREGGAT 458

Query: 465 FEQLFSTLEQD 475
            + L   ++ D
Sbjct: 459 LKALLRRIDAD 469


>gi|218777915|ref|YP_002429233.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759299|gb|ACL01765.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 595

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 50/340 (14%)

Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M+PS+T  +A ++    T    + + PK++  E+  T             + LTE   G+
Sbjct: 125 MAPSLTHGAAHLIESFGTDEQKQTYIPKMYGGEWAGT-------------MALTEPNAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           ++AA+ +      D  Y + G+K F+S    D       + LA++EG       +  F+V
Sbjct: 172 NLAALETMAYPEGDH-YKIKGNKIFISWGDHDLAGNIVHLALARIEGAPEGVRGISLFIV 230

Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P  R+ E+G+P   N +    ++ K+G  S+ T  L F       G+L G  N+    + 
Sbjct: 231 PKYRVDENGNPGEFNDVVCTGIEKKLGLHSSPTAALAFGGKDGCIGYLCGKANMGLAHMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAI-- 359
            M     +++ +  +S    +   A+ Y + R     I         +ID P ++R +  
Sbjct: 291 QMMNAARINTGVSGMSMASAAYQHALDYTKSRVQGRDIAKRKQGSVPIIDHPDVRRMLLW 350

Query: 360 ----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                D    +   TA    LA    + + +         M PI K +C  +   V   A
Sbjct: 351 MKGAVDGMRSMIYTTAFWADLAQVTTDPEEKERCTMLMEFMTPIVKSYCSDIGFKVCETA 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M+C+GG G+ ++  I ++ R+S   S+  G+      D++
Sbjct: 411 MQCLGGYGFCKDYPIEQYLRDSKIMSLYEGTNGIQSTDLM 450


>gi|183222449|ref|YP_001840445.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912487|ref|YP_001964042.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777163|gb|ABZ95464.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780871|gb|ABZ99169.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 570

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 64/366 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+++ +  +  +  +W PK+ S  Y  T             +GL+E   G+D+  IT++ 
Sbjct: 157 AAILEVCASEEMKNEWIPKLISGNYTVT-------------MGLSEPDFGSDLPNITTKA 203

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFL-VPRL-LEDGSPNGLCY--- 272
            K        +G +WFL+   +  F  +A  V G  G  L + R   ++    GL +   
Sbjct: 204 FK--------NGEEWFLNG--TKRFQTVACGVNGGSGITLTLARTGTQESGARGLSFFIV 253

Query: 273 -------QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
                  Q ++ K+G +++AT E  F N+ G L+G      G V+   ++  L+ A +SV
Sbjct: 254 ENKDYVVQGIEKKLGIKASATCETVFENSKGHLVGKEGF--GLVK--YVMGMLNGARLSV 309

Query: 326 SG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      +  +  E+  YA  R   G  + + P ++R +  +  ++A    L    A S 
Sbjct: 310 SSQGTGIVTAAFEESYKYANERIQFGKPIYEIPAVRRMLDRMERELAGMRCLMVEAAYSV 369

Query: 381 D--------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           D              E KS       A  + PI+KY+  +M   ++ + ++ +GG+GY E
Sbjct: 370 DKYYWYEDGREVSTEELKSAKFWEKVANTLTPISKYYNSEMCNDLVYDGLQVLGGAGYTE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFEQLFSTLEQDLGSSGKKV 483
           +  ++R YR++   +I  G+    V   +  +     GT  F      L   LGS G K 
Sbjct: 430 DYDLSRLYRDARITNIYDGTTQIQVNAAIGGITSGMSGTGTFRAYLDHL--SLGSDGNKR 487

Query: 484 ITILRD 489
           +  +R+
Sbjct: 488 LKEIRE 493


>gi|323495209|ref|ZP_08100293.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
 gi|323310568|gb|EGA63748.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
          Length = 384

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MV    T    + + PK+ S E+                LG   LTE   G+D AA+T+ 
Sbjct: 96  MVGSFGTQAAIESYCPKLISGEW----------------LGSYCLTEPNAGSDAAALTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K+++  Y L+G K F+S    +D  +++A+  G  G   +   +      G+ Y R +
Sbjct: 140 A-KLTEQGYVLNGAKVFISGAGDTDVLVVMART-GEAGAKGISAFIVPADSQGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G    MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRSISFDNVVVPVENLLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  +    A+  D+  S  +  A
Sbjct: 256 LNQATQYLKERKQFGQPLAQFQALQFKLADMATELVAARQMVRLAASKLDQGSS--DATA 313

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           Y      + K +   +  AV  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 314 YC----AMAKRYATDIGFAVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 LDVL-NLLEKGTNLF 465
           + V   LL++G  L 
Sbjct: 370 MIVARRLLQEGAQLL 384


>gi|240140922|ref|YP_002965402.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
 gi|240010899|gb|ACS42125.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
          Length = 587

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++A+ ++ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DGS N L    +++K+G  ++ T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AA+  + +  A   D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           ++  GG G++EE   A+  R++    I  G+     +D++     L  G  +  Q+ S
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457


>gi|307941476|ref|ZP_07656831.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307775084|gb|EFO34290.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 598

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL    +    + + P + S  +  T             + LTE   GT
Sbjct: 126 MYPGLTAGAIAALTQHGSQEQKEKYLPNMISGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGLIRTKAIPNGDGSYKISGTKIFISAGDHDLSENIIHLVLARIEGAPQGTKGISLFVV 232

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  + +DGS    NG+    +++K+G  SNAT  + +    G+L+G+ N     +  M 
Sbjct: 233 PKFAVADDGSVGASNGVSCGSIEHKMGIHSNATCVMNYDEATGWLVGEENKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L  A+  +S   V+   A+ YA+     R +SG          +I  P ++R +  
Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVAYAKDRLQGRSLSGPKSPDKAADPIIVHPDVRRTLMS 352

Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I      A  +   TA+   +++  ++ K+R        +M P+ K     +  A    A
Sbjct: 353 IRSFNEAARALVLWTAMHGDISHHAEDEKTRQAADDVMGLMTPVLKGVLTDIGFANTVNA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYI+E  + +  R++    I  G+     LD++
Sbjct: 413 QQMFGGHGYIQEWGMEQFVRDARIAMIYEGANGIQALDLV 452


>gi|254485501|ref|ZP_05098706.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101]
 gi|214042370|gb|EEB83008.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101]
          Length = 571

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 59/347 (17%)

Query: 150 HLMSPSVTSASMVALMTTPRVH----------KD-WAPKIFSREYDPTNKAPMQKTSVAI 198
            +MS +  S  +  LM+  ++           KD + PK+ S E+  T            
Sbjct: 113 EMMSGACLSLQLAPLMSQGQIEALEHHASDAIKDLYLPKLISGEWTGT------------ 160

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR- 252
            + LTE + G+D+ A+ S+ +   DG + +SG K ++S   +D       ++LA++ G  
Sbjct: 161 -MNLTEPQAGSDVGALASKAEDNGDGTFSISGQKIYISWGDNDFAENVCHLVLARLPGAP 219

Query: 253 -----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                +  FLVP++L +     G  N L    L++K+G   + T  +++    G+L+G  
Sbjct: 220 AGTKGISLFLVPKILPNDDGTLGKANSLKVVSLEHKMGLHGSPTCVMQYDQATGWLVGP- 278

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG-------GILI 350
               G +  M     +++A + V    + +AE     A+ YA  R           G ++
Sbjct: 279 --EQGGMAAM--FTMMNNARLGVGEQGIGVAEGAYQHALAYALDRKQGKTSTADGTGSIV 334

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMA 408
           D   ++R +  +  D  AA A++   A + D   A   ++  + A  + PI K +     
Sbjct: 335 DHADVRRMLMTMKADTFAARAIALSCAVAIDMTNATGEADWKSRAAFLTPIAKAFGTDTG 394

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            AV    ++  GG G IEE   A++ R+    +I  G+     +D++
Sbjct: 395 IAVSETGVQVHGGMGVIEETGAAQYCRDVRVTAIYEGTNGIQAMDLV 441


>gi|240139993|ref|YP_002964470.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
 gi|240009967|gb|ACS41193.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
          Length = 596

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+   +P     + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M 
Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361
               L   +  +     +   A+ YA+ R     ++G    D+        P ++R +  
Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + AA      TAL+  +A+   +A  R        +M P+ K        A   EA
Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GY+EE  +++  R++    I  G+     +D++                L +D
Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504
            G +    +T ++  I    ED+G+  F+
Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488


>gi|115524259|ref|YP_781170.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518206|gb|ABJ06190.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 379

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 125 LAITEPSGGSDVANLRTSAKRDGDD-YVVNGEKTFITSGMRADYITTAVRTGGPGPGGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            L+  G   GL    LK K+G  ++ T  L F N     G LLG           + I++
Sbjct: 184 LLVIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----LIIMM 237

Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  +S++       +V L EAI YA+ R   G  L+   V++  + D+A  IAA+ A
Sbjct: 238 NFNSERISMAAGCTAASKVCLDEAIAYAKERVTFGKPLVKHQVIRHKLVDMAQRIAASQA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA   ++ ++   E    +  A  T  +C        +EA++  GG+GY+    + 
Sbjct: 298 MLEMLAWRLEQGENPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350

Query: 432 RHYRESPANSILLGSGNAM 450
           R YR+   N+I  G+   M
Sbjct: 351 RIYRDVKVNAIGGGAEEIM 369


>gi|163795653|ref|ZP_02189619.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium
           BAL199]
 gi|159179252|gb|EDP63785.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium
           BAL199]
          Length = 380

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 27/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ ++ +K+ +  Y L+G K F+S +  SD + ++ +  G     V C 
Sbjct: 124 LTEPGSGSDAAALKTKAEKVGNSHYMLNGGKAFISGAGTSDVYAVMCRTGGDGPKGVSCI 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LV    E  +P GL + + + K+G  S  T  + F        N  G       ++   +
Sbjct: 184 LV----EKDTP-GLSFGKKERKLGWNSQPTAMVTFEDCKVPAENLVGTEGEGFRIAMQGL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A  S+ G R +L +A+ Y + R   G  + D    +  +AD+A ++ AA
Sbjct: 239 DGGRINI----AACSLGGARAALEQALSYVKERKQFGKSIADFQATQFRLADMATELDAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+ R A S D AKS       A + A + K +   +   ++ EA++  GG GY+++  
Sbjct: 295 RLLTHRAAASLD-AKSPD-----ATLHAAMAKRFATDIGFKIVDEALQLHGGYGYLKDFP 348

Query: 430 IARHYRESPANSILLGSGNAM 450
           + R  R+   + IL G+   M
Sbjct: 349 VERLLRDLRVHRILEGTNEIM 369


>gi|319795700|ref|YP_004157340.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598163|gb|ADU39229.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 586

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 51/351 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252
           LTE   G+D+  + ++    +DG + +SG K F+S    D       ++L ++     G 
Sbjct: 164 LTESHAGSDLGQVRTRAVPQADGSFRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPAGP 223

Query: 253 VGCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G  LV  P+LL DG+ N +  +R++ K+G   + T  + F +  G+L+G+       + 
Sbjct: 224 KGLSLVLMPKLLPDGARNAVHCERIEEKMGLHGSPTCSMRFDDATGWLVGEAGRGLAAMF 283

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG------------ILIDQPVMK 356
            M     L  A+  +  +  +  +A  YA  RR+  + G            ++ + P ++
Sbjct: 284 VMMNSARLHVALQGIGLLDAAWQKADAYAAERRQMRAPGAVPANRGTEAADLIAEHPAIR 343

Query: 357 RAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +      I  A  L++R A   D A      K+R     +  ++ P+ K  C   A  
Sbjct: 344 RILDTQRAWIDGARTLAYRSALMLDVAAHDADPKARERAQRWCSLVTPVLKAACTHQAFH 403

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
             +E ++  GG GY+ E  I +  R++    I  G+     +D+             L  
Sbjct: 404 GASECLQVFGGHGYVREWGIEQVVRDARVTMIYEGTNEIQAIDL-------------LVR 450

Query: 471 TLEQDLGSSGKKVITILRDSISLCKE-----DKGLA--RFLTEKIALASSA 514
            +  D G++   V+  LRD++   +E      + LA  R+L   IA+++ A
Sbjct: 451 KVLPDGGAAMSAVLLELRDTLDASREADADVQRRLAQLRYLGTTIAMSAHA 501


>gi|218531501|ref|YP_002422317.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523804|gb|ACK84389.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 596

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+   +P     + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M 
Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361
               L   +  +     +   A+ YA+ R     ++G    D+        P ++R +  
Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + AA      TAL+  +A+   +A  R        +M P+ K        A   EA
Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVLTDRGFANAVEA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GY+EE  +++  R++    I  G+     +D++                L +D
Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504
            G +    +T ++  I    ED+G+  F+
Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488


>gi|288957345|ref|YP_003447686.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288909653|dbj|BAI71142.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 598

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 59/333 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+AA+ ++  +  DG Y ++G K F++     +++  I L         A
Sbjct: 161 MNLTEPQAGSDLAAVRTRAARAGDGSYRITGQKIFITYGEHDLTENIIHLVLARLPDAPA 220

Query: 248 QVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
            ++G +  F+VP+ L   DG+P   N L    L++K+G  ++ T  + + +     G+L+
Sbjct: 221 GIKG-ISLFIVPKFLPEADGTPGRRNDLRCASLEHKLGIMASPTAVMAYGDDEGAIGYLV 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR---------HVS 345
           G+ N     +E M     +++A + V    V++AE     A  YA+ R           S
Sbjct: 280 GEENRG---IEYM--FTMMNNARLGVGIQGVAIAERAYQQARDYAKSRVQSKDLADPKGS 334

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPI 399
           G  +I  P ++R + D+     AA AL+       D      +A  R+   A   ++ PI
Sbjct: 335 GVAIIKHPDVRRMLLDMRAKTEAARALALYAGTQLDISRHHADATVRAAALARVDVLTPI 394

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K W   +   V +  ++  GG G+IEE   A+HYR++    I  G+             
Sbjct: 395 VKAWSTDIGCEVASTGVQIHGGMGFIEETGAAQHYRDARITPIYEGT------------- 441

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            G +  +  F    +D G++ +  +  +R +++
Sbjct: 442 NGIHGNDLTFRKTGRDKGAAARAFVADMRATVA 474


>gi|254562420|ref|YP_003069515.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
 gi|254269698|emb|CAX25670.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
          Length = 596

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+   +P     + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M 
Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361
               L   +  +     +   A+ YA+ R     ++G    D+        P ++R +  
Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352

Query: 362 I-ALDIAAAT-----ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + AA T     AL+  +A+   +A  R        +M P+ K        A   EA
Sbjct: 353 IRAFNEAARTLMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GY+EE  +++  R++    I  G+     +D++                L +D
Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504
            G +    +T ++  I    ED+G+  F+
Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488


>gi|160875501|ref|YP_001554817.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160861023|gb|ABX49557.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315267688|gb|ADT94541.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 585

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++     DG Y ++G K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++    DGS    NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNADGSLANANGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + F N  GFL+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           R+    +GG         +I    ++R +  I     A  ALS       D AK   +E 
Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A Y  ++ P+ K +           A +  GG GYI E  I +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|163853502|ref|YP_001641545.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665107|gb|ABY32474.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 587

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++A+ ++ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DGS N L    +++K+G  ++ T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AA+  + +  A   D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           ++  GG G++EE   A+  R++    I  G+     +D++     L  G  +  Q+ S
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457


>gi|271967132|ref|YP_003341328.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270510307|gb|ACZ88585.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 380

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256
           L+E   G+D AA+T++    +DG Y + G K W     ++D + ++A+     GR + CF
Sbjct: 127 LSEPHSGSDAAALTTRAVPDADG-YVVDGVKAWITHGGVADFYTLMARTSDDGGRGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
            VP   E     GL Y   + K+G RS+ T ++ F +     L    +     E  +I +
Sbjct: 186 HVPAGTE-----GLSYGVPERKMGMRSSPTAQVRFDSV---RLASDALLGAEGEGFRIAM 237

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   V +A+A       YA+ R   G  + D   +   +AD+A  IAAA 
Sbjct: 238 AALDGGRLGIAACAVGVAQAALDAATGYAKERRQFGSRIADFQGVGFMLADMATQIAAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +    +AA A++ A         M   V  +A++ +GG GY+E+  +
Sbjct: 298 ALYLDAARLRDAGRPYGTQAAMAKLFA-------TDMCMKVTTDAVQVLGGYGYVEDFPV 350

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 351 ERYMREAKVLQIVEGT 366


>gi|116695276|ref|YP_840852.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529775|emb|CAJ96122.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 521

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +      + PK+ S E+  T             + LTE + G+
Sbjct: 54  LCPMLTDGAIEALLTAGSDAQKATFLPKLISGEWTGT-------------MNLTEPQAGS 100

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 101 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAQNIVHLVLARTPNAPEGVKGISLFIV 160

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 161 PKFLVNDDGSTGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 217

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I ++SA  SV    ++++E     A+ +AR R  S  +         +I  P +K
Sbjct: 218 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVK 275

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A+ + A  +A   A +   A+   +   R +  A+   M P+ K W  +++  
Sbjct: 276 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRGQSQAFYEFMVPVVKGWSTELSID 335

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+HYR++
Sbjct: 336 VTSLGVQVHGGMGFIEETGAAQHYRDA 362


>gi|153837593|ref|ZP_01990260.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus
           AQ3810]
 gi|149749090|gb|EDM59901.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus
           AQ3810]
          Length = 384

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T  V   + PK+ + E+                LG   LTE   G+D A++++ 
Sbjct: 96  MVASFATEDVRAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLSTT 139

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  D  Y L+G K F+S +  +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 AHKKGD-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQADGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G +  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D   S      
Sbjct: 256 LNQATQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDSD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   +  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|119897993|ref|YP_933206.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670406|emb|CAL94319.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 599

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T+ ++ AL+      +   + PK+ S E+  T             + LTE + G+
Sbjct: 126 LCPMLTTGAIEALLLRGNDEQKAMYLPKMVSGEWTGT-------------MNLTEPQAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++     ++D  I  +LA++    EG  G   F+V
Sbjct: 173 DLAAVRTRAEPQGDGTYRIFGQKIFITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ + +     G+ N +    +++K+G  ++ T  L F +     G L+G+ N     +E
Sbjct: 233 PKFMVNADGSLGARNDVECVSIEHKLGIHASPTCVLAFGDKGGAIGTLVGEANRG---LE 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGG---ILIDQPVMK 356
            M   I ++ A  +V    ++L+E     A+ YA+ R       V GG    +I    ++
Sbjct: 290 YM--FIMMNEARFAVGMEGLALSERAYQHALAYAKDRVQGTEAGVRGGPKVSIIHHADVR 347

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPA 410
           R +  +     A  AL++ +  + D A   ++EA      A+  +M P+ K WC + +  
Sbjct: 348 RMLMSMKSQTEAMRALAYVVGAATDLAHHHADEAVRASNQAFVDLMIPVVKGWCTENSIE 407

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +  ++  GG G+IEE   A+H R++   SI  G+
Sbjct: 408 IASTGVQVHGGMGFIEESGAAQHLRDARITSIYEGT 443


>gi|163734515|ref|ZP_02141954.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och
           149]
 gi|161392008|gb|EDQ16338.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och
           149]
          Length = 593

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251
           + LTE   GTD+  + ++ +  +DG Y L+G K F+S+   D       ++LA++ G   
Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSYTLTGQKIFISAGEHDMSSNIIHLVLAKIPGGPE 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  +DGS    N +   +++ K+G   N+T  + +    G+LLG+ +
Sbjct: 221 GIKGVSLFIVPKFIVKDDGSLGERNAVAVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351
                +  M     L   +  +S    +   A+ YA+     R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGMQGMSQAAAAYQNALEYAKDRLQGRDVTGEKNPDGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAP 409
            P ++R++ D    +  A A     A   D A +S  ++A     ++ P+ K +      
Sbjct: 341 HPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +A +  GG GYIEE  +++  R++    I  G+     LD++ 
Sbjct: 401 DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447


>gi|295701069|ref|YP_003608962.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440282|gb|ADG19451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 594

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 56/361 (15%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           LMSP +T  +   L T  + RV  +  PK+ S E+  T             + LTE + G
Sbjct: 126 LMSPGLTHGATACLQTHGSERVKTELLPKVASGEWLST-------------MCLTEPQAG 172

Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255
           +D+  I S+  +   +DG Y + G K F+S    D       ++LA++     G  G   
Sbjct: 173 SDVGLIRSRAAQAPGTDG-YFIDGSKIFISGGAHDLTENIVHLVLARLPDAPSGTKGLSL 231

Query: 256 FLVPRLLEDG----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           F+VP  LEDG    S N +  + ++ K+G + + T  + F   FG+L+G+ +     +  
Sbjct: 232 FVVPEWLEDGDGGRSRNAVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLACLFV 291

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILID---------QPVMK 356
           M     L  A+  +     +   A  YA+ R       V  G  +           P M+
Sbjct: 292 MMNAARLQVAMQGLGHAHTAWQRAHAYAQERAQMRAVSVPPGATVPAGQAAPIAFHPAMR 351

Query: 357 RAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPA 410
           R + ++   +    A+ +  A+  D A        R + A +A ++ P+ K +       
Sbjct: 352 RILMELRAIVEGERAIGYWTAHWLDIAAHHADAAEREQAAQFASLLTPVAKAFFTANGFD 411

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468
             ++A++  GG GYI E  I +  R+S  + +  G+     +D+L   +L  G    + L
Sbjct: 412 AASKALQVFGGYGYIHEYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGAGALDAL 471

Query: 469 F 469
            
Sbjct: 472 L 472


>gi|218781160|ref|YP_002432478.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762544|gb|ACL05010.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 55/320 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A+T+   K  DG Y ++G+K F+S+   D        +LA++EG     
Sbjct: 164 LTEPEAGSDVGALTTTAVKNEDGTYNITGNKIFISAADHDLVDNVVHPVLARIEGDPAGT 223

Query: 253 --VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             +  FLVP+  + EDG+    N +   R++ K+G  ++AT  ++F       G LLG+ 
Sbjct: 224 SGISIFLVPKYWVNEDGTTGDYNNVYVDRIEEKMGIHASATCSVQFGAKGPCRGLLLGEE 283

Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRR------------HV 344
                  + M+I+ +      L+  +  +     +   A++YAR R              
Sbjct: 284 R------KGMRIMFHMMNEERLNVGVQGLGSASAAFLLALNYARERVQGKEILKSRDPEA 337

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARI---MAP 398
            G  +I+ P ++R +  +   +    +L++      D+   ++S  E++ Y  I   + P
Sbjct: 338 KGATIINHPDVRRMLLQMKAYVEGLRSLNYYTGYCMDKVVTSESDEEKSLYQGIVDLLTP 397

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL- 457
           I K +  + +  V  +A++  GG G+ +E  + +  R++   +I  G+      D+L   
Sbjct: 398 ICKGYTTEKSVLVCNDAIQTYGGYGFTKEYPVEQLARDTKILTIYEGTTGIQAADLLGRK 457

Query: 458 --LEKGT---NLFEQLFSTL 472
             ++KG       EQ+ +T+
Sbjct: 458 LGMQKGQVFMKFLEQINATI 477


>gi|288931943|ref|YP_003436003.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894191|gb|ADC65728.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 383

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 132/297 (44%), Gaps = 33/297 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E       P   +  AI  G  TE   G+D+ AI ++ +K  D  + ++G K F++ 
Sbjct: 101 FGSEEQKEEVLPKVASGKAITAGCYTEPEAGSDLTAIRTKAEKDGDE-WVINGTKTFITN 159

Query: 237 SPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +P++D F++LA      + R   F     L   +  GL   ++  K G RS+ T E+ F 
Sbjct: 160 APIADYFVVLAVTDPNAQPRYRGFTT--FLVRKNAEGLKINKITGKFGIRSSPTAEVSFK 217

Query: 293 N---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
           +   +   ++G LN         ++L + D + + ++   + +A+      I Y ++R  
Sbjct: 218 DVRVSEEDVIGQLNRGF-----YQVLEFFDGSRIEIAAQAIGIAQGALDKTISYVKQRKQ 272

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     ++  IAD+A  + A   L ++ A  +D  +           +  + KY+ 
Sbjct: 273 FGQPIGAFQALQHRIADMAAQLEACRLLVYKAAWKYDRGEIDP-------ALTSMAKYYA 325

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            K+A  +  EA++  GG GYI E  + R YR++    I  G+        LN + KG
Sbjct: 326 GKLAVRICDEAIQMHGGYGYIAEYDVERFYRDAKITEIYEGTKEIQ----LNTIAKG 378


>gi|186475154|ref|YP_001856624.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191613|gb|ACC69578.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 595

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELKQAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPKGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D  G+P   NG+
Sbjct: 191 AISGTKIFISSGEHDLADNIVHLVLARLPDAPHGTKGISLFVVPKFVPDANGNPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLIYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 HIDKELSHADEAVRKDAADLVALLTPIIKAFLTDNAFEGTNMAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+ +   LD+L
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLL 453


>gi|319652848|ref|ZP_08006954.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317395425|gb|EFV76157.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 591

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 46/307 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           +    TP   + + PK+ S EY              IG   LTE   G+D  A++SQ   
Sbjct: 122 ITYFGTPEQKEKYLPKLASGEY--------------IGAYCLTEPNAGSD--ALSSQTTA 165

Query: 221 I--SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +   +G  Y L+G K ++++ + SD FI+ A+V+G+   +    ++E  +P GL     +
Sbjct: 166 VLNQEGTHYILNGTKIYITNAVFSDTFIVYAKVDGQ---YFTAFIVERDTP-GLSLGPEE 221

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMR 329
           NK+G + ++T  + F +       LLG+  V  G +  + +L      L SA M  S  +
Sbjct: 222 NKMGIKGSSTRSVIFEDCPVPANQLLGE--VGKGHIIALNVLNLGRFNLGSACMGAS--K 277

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L +AI +   R   G  + D P  K  IA +A  I AA +L +R AN  +E+ +   +
Sbjct: 278 TGLKKAIQFTGERKQFGKSIADFPATKEKIAKMAGRIYAAESLQYRTANLLEESLADLYD 337

Query: 390 AAYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           ++  +++            I K +  +       E ++  GG+G+I+E  + + YR+S  
Sbjct: 338 SSDLKLIGKRMSEYATECAICKVFGSETLDYAADEVLQLHGGAGFIKEYGVEQMYRDSRI 397

Query: 440 NSILLGS 446
           N I  G+
Sbjct: 398 NRIFEGT 404


>gi|299768636|ref|YP_003730662.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
 gi|298698724|gb|ADI89289.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
          Length = 607

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSYQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRLLLT 352

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + +  + +LA+   +A +R ++AAY           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NNGMQVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIG 456


>gi|295675473|ref|YP_003603997.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435316|gb|ADG14486.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 595

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +        A  A S+  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGRAFSYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNGIQSLDLL 453


>gi|269967501|ref|ZP_06181557.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269827883|gb|EEZ82161.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 384

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+T+   K  D  Y L+G K F+S +  +D  +++A+  G  G   V  
Sbjct: 124 LTEPNAGSDAAALTTSATKKGDK-YVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316
            +     +G+ Y R + K+G  S  T  + F N       LLG+     G V  MK L  
Sbjct: 182 FVVPAHADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFVFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L +A  Y + R   G  L     ++  +AD+A ++ AA  L   
Sbjct: 240 GRINIATCSVGTAQQALNQAARYIQERKQFGKPLAQFQALQFKLADMATELVAARQLVRY 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A+  D  ++  +  AY      + K +   +   V  +A++  GG GYI+E  + RH+R
Sbjct: 300 AASKLD--RNDPDATAYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|254229385|ref|ZP_04922801.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262396842|ref|YP_003288695.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151938076|gb|EDN56918.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262340436|gb|ACY54230.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 384

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 22/302 (7%)

Query: 160 SMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITS 216
           S  A MT   +H    W    F+ +   T   P   T   +G   LTE   G+D AA+T+
Sbjct: 82  STTAFMT---IHNMVSWMIASFATDEAKTQFCPKLVTGEWLGSYCLTEPNAGSDAAALTT 138

Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
              K  D  Y L+G K F+S +  +D  +++A+  G  G   V   +      G+ Y R 
Sbjct: 139 SATKKGDK-YVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQAGGISYGRK 196

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRV 330
           + K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + 
Sbjct: 197 EPKMGWNSQPTRAVTFENVVVPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQ 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D  ++  +  
Sbjct: 255 ALNQAAWYIQERKQFGKPLAQFQALQFKLADMATELVAARQLVRYAASKLD--RNDPDAT 312

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           AY      + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL G+   M
Sbjct: 313 AYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTNEIM 368

Query: 451 VL 452
            L
Sbjct: 369 RL 370


>gi|167623980|ref|YP_001674274.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354002|gb|ABZ76615.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 586

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 35/297 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           +G+TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G
Sbjct: 164 MGMTEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  NG+    +++K+G + ++T  + F +  G+L+G  N   G
Sbjct: 224 ISLFLVPKIKVDADNSLGDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRAN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG         IL+  
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGASIDPILVHG 340

Query: 353 PVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            V +     RA+ +    ++  T L   LA   +++ ++++ + Y  ++ P++K +    
Sbjct: 341 DVRRMLLTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDR 400

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                  A +  GG GYI E  I +  R++    I  G+     +D L     G N+
Sbjct: 401 GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNV 457


>gi|113868125|ref|YP_726614.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113526901|emb|CAJ93246.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 386

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 17/274 (6%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
           RE+ P     M    V   + +TE   G+D+ AI +   K+ DG Y L+G K F+++   
Sbjct: 118 REFLPR----MASGDVVGSIAMTEPGAGSDLKAIRTSAVKV-DGGYRLNGQKTFITNGYH 172

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
           +D  ++ A+ E   G   +     D +  G    RL +KIG ++  T EL F +      
Sbjct: 173 ADRVLVFAKTEPAAGARGISLFWVDTTSPGFSRGRLLDKIGQKAQDTAELFFEDVLVPDD 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+ N   G      +   L  A+     + V+L   I + + R      LID   ++
Sbjct: 233 MLVGERNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIAHVKERRAFDKALIDNQFIR 292

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+I     A  A        +       + AA A       KYW  + A   I + M
Sbjct: 293 FRLAEIKTHACATRAFVDSCLEQYLAGTLTPDGAAMA-------KYWAGE-ATRAIDDLM 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y +   N I  GS   M
Sbjct: 345 QFFGGYGYMREYPIARAYTDVRPNRIYGGSAEIM 378


>gi|121603717|ref|YP_981046.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592686|gb|ABM36125.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 563

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 39/345 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+   +++     DG + +SG K F+S    D       ++LA++     G 
Sbjct: 166 LTEPHAGSDLGLASTRAVPQPDGSFQISGTKIFISGGEHDLSDNIVHLVLARLPDSPSGP 225

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G   FLVP+  EDGS + +  +R++ K+G   + T  + F    G+L+G+       + 
Sbjct: 226 KGLSLFLVPKFYEDGSRSAVFCERIEEKMGLHGSPTCVMRFDQATGWLVGEHGKGLNAMF 285

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----------VSGGILIDQPVM---- 355
            M     L  A+  V  +  +  +A  YA+ R             +  ++I  P +    
Sbjct: 286 LMMNAARLHVALQGVGLLDAAWQKADAYAQERRQMRAPGPRDPSQAADLIIRHPAVQRLL 345

Query: 356 --KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +RA  D    +A  TA+   +A    +   R +   +  ++ P+ K      A    +
Sbjct: 346 DTQRAWVDAGRLLAYQTAIELDVAKHHPDPARRQQAGQWCALVTPVLKASWTDQAFHGSS 405

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           + ++  GG GY+ E  I +  R+S           AM+ +  N ++    LF ++ S   
Sbjct: 406 DCLQVFGGHGYVREWGIEQIVRDSRV---------AMIYEGTNEIQAQDLLFRKVLSDQG 456

Query: 474 QDLGS--SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
           + LG+  SG +      +S S  +  +G AR      A+ SS  A
Sbjct: 457 RGLGAVLSGLQADLQGGNSASAQRTQEGFARLRDLLAAIESSGGA 501


>gi|257455691|ref|ZP_05620920.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257446974|gb|EEV21988.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 606

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 70/397 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++   M  +M   TP     + P +    +  T             + LTE + GT
Sbjct: 127 MYPGLSVGCMNTIMQYGTPEQKATYMPALVEGRWSGT-------------MCLTEPQCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++     DG Y +SG K F+SS   D       I+LA++    EG  G   F+V
Sbjct: 174 DLGQVKTKAIPQDDGTYKISGTKIFISSGEHDLTENIVHIVLARLPDAPEGTKGISLFIV 233

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L     + G  N +    +++K+G +++AT  L F N  G+L+G+ N     +    
Sbjct: 234 PKFLVTENGDIGERNPVNCGSIEHKMGIKASATAVLNFDNATGYLIGEPNKGLKAMFTFM 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               L + +  ++ M ++   ++ YA+ R              V+  I+    V +  + 
Sbjct: 294 NTARLGTGMQGLAHMELAFQNSLPYAKERRSMRTLSGTKEPNQVADAIIHHADVARMLLT 353

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A    A + +  + R A+   E     ++A + +         PI K +  +++    
Sbjct: 354 QKAFSEGARSMIYHASRYADKMFEGAMLGDDAEFHKWDDKLGFYTPILKGFLTELSIECA 413

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
              M+  GG GYI+E  + +  R++  +++  G+     LD+L     G  +  Q     
Sbjct: 414 KHGMQIYGGHGYIKEWGMEQIARDARISTLYEGTTGVQALDLL-----GRKVLIQ----- 463

Query: 473 EQDLGSSGKKVITILRDSISLCKE---DKGLARFLTE 506
                S GK ++    + +  C E   DKG+ +F+ E
Sbjct: 464 -----SKGKVLLDYTANIMKWCSEYALDKGMRKFVWE 495


>gi|103487794|ref|YP_617355.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977871|gb|ABF54022.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 391

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 16/267 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+      I LG+TE  GG+D+A + +   +  D  Y ++G K F++S M   ++  A  
Sbjct: 124 PVLAGEKIIALGITEASGGSDVANLRTTAVRDGDS-YIVNGDKMFITSGMRADWLTCAVR 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
            G  G   +  LL D    G+   RL +K+G R + T  + FS+       L+G  N   
Sbjct: 183 TGGPGAGGISLLLIDMDSPGVERTRL-DKMGWRCSDTAAIHFSDVRVPVENLIGPEN--G 239

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G +  M+      L  A+   +  RV++AEA  +A+ R   G  L+    ++  +AD+  
Sbjct: 240 GFIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMER 299

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I A  A     A    E K R  + A  ++ A        +M  AV  EA + +GG+ Y
Sbjct: 300 QIEATQAWVDLCAWQVKEGKDRPADFAMLKVQA-------TRMLEAVAREAAQVLGGASY 352

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           I    + R YRE   N+I  GS   M+
Sbjct: 353 ITGSKVERIYREVRVNAIGGGSEEIML 379


>gi|301059293|ref|ZP_07200220.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300446522|gb|EFK10360.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 375

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 34/262 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGC 255
           +G  +TE   G+D+ AI    +K  D  Y L+G K F ++  ++  + +LA+  E  +  
Sbjct: 120 MGYLVTEPEAGSDVQAIRCTARKSGDH-YVLNGRKVFATNGSVAGLYSVLAKTGEKELSF 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVE 310
           F+V R  E     G+   R++ K G R + T E+        +L D+ V        P E
Sbjct: 179 FMVERDRE-----GISIGRIEEKCGFRGSNTAEV--------ILEDVKVPAENLIGRPGE 225

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +   D +  +V+ + + LAE      + YAR R   G  LI+   ++  +AD A 
Sbjct: 226 GFKIAMGDFDMSRPAVAALSLGLAEGALDYTVEYARNRQTFGKPLIEHQAIQFLLADAAT 285

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I A+  L  + A +FD  +  ++       +A + K++C   A  +  + ++ +GG GY
Sbjct: 286 LIEASRGLMEQAAVAFDSGRKNTK-------LASMAKFFCSDAAMKITTDMVQVLGGYGY 338

Query: 425 IEERSIARHYRESPANSILLGS 446
           I +  I R +R++    I  G+
Sbjct: 339 IRDYPIERMFRDAKLTQIFEGA 360


>gi|52138966|gb|AAH82665.1| LOC494679 protein [Xenopus laevis]
          Length = 438

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 32/273 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ +  QK  D  Y ++G K W  +S  +  F+++A      G     C
Sbjct: 182 LSEAESGSDAFSLRTNAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP+  E     G    + ++K+G R+++T  L F N       +LG L        +M
Sbjct: 241 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESSILGQLGHGYKYAIEM 295

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+   + ++   + LA+      I Y ++R   G  +ID   M+  I+ +A  + 
Sbjct: 296 -----LNEGRIGIAAQMLGLAQGCFDHTIPYTKQRVQFGKRIIDFQGMQHQISQVATQLE 350

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L++  A   +  +   +EA  A       KY+  ++A    ++ +E +GG GY ++
Sbjct: 351 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFASEVACLTTSKCIEWMGGVGYTKD 403

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             I +++R+S   +I  G+ N  +  +  L+E+
Sbjct: 404 YPIEKYFRDSKIGTIYEGTSNIQLSTIAKLIEQ 436


>gi|150395373|ref|YP_001325840.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150026888|gb|ABR59005.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 598

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 178/426 (41%), Gaps = 86/426 (20%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ A++   +    + + PK+    +  T             + LTE   G
Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  + ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+
Sbjct: 172 TDLGLLRTRAVPNGDGSYRISGQKIFISAGEHDMAENIVHLVLARIEGAPDGVKGISLFI 231

Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP  RL   G P   NG+    +++K+G   NAT  + +    G+L+G  N         
Sbjct: 232 VPKFRLDAGGEPSERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355
            + + ++ A ++V    +S+AE     A +YAR     R +SG          +I  P +
Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAANYARDRIQGRSLSGPKSPDKKADPIIVHPDI 346

Query: 356 KRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYA-----RIMAPITKYWCCKMAP 409
           +RA+  I        A +   A   D A +S SEE          +M PI K        
Sbjct: 347 RRALLTIKAFNEGGRAFTLWTALKSDIAHRSESEEERQTADDILSLMTPILKGVLTDKGF 406

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A +  GG GYIEE  ++++ R++    I  G+     LD++     G  L     
Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAL--- 458

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV- 528
                   + G+ V+ + ++    C+E++       EK++  + A    + G+ND+    
Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRN-----DEKLSAYTKA---LKKGLNDLQSAT 502

Query: 529 --FLEN 532
             F++N
Sbjct: 503 MWFMQN 508


>gi|119502971|ref|ZP_01625056.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119461317|gb|EAW42407.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 388

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 152/382 (39%), Gaps = 47/382 (12%)

Query: 97  VEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYL------------ 142
            + H AW   LRR I   +  +   WD + E  +           L L            
Sbjct: 16  TDLHHAWREQLRRFIDVEIMPYADDWDEAGEIPIGLWPKAAEVGLLGLSYPEVYGGTPGD 75

Query: 143 --MAQL---EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             + Q+   E G + +  + ++ MV  +  P +  +W  +    E  P    P+ +    
Sbjct: 76  VWLGQITAEELGRVGAGGINASLMVHNIGLPPI-INWGSQTMKDEIAP----PILRGEAW 130

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE  GG+D+A + +   +  D  Y ++G K +++  M   ++  A   G  G   
Sbjct: 131 ISLGITEPGGGSDVANLQTTAVRDGDD-YVVNGSKTYITGGMRANWVSTAVRTGGEGAGG 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGP 308
           V  LL      G     L  K G  ++ T  L F N       L+G+ N      ++   
Sbjct: 190 VSMLLIPTDAEGFSRTPLNRKQGWWASDTATLYFDNVRVPATQLIGEENQGFRVIMTNFN 249

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            E M + I++++A       RV + EA+ +AR R   G  L D  V++  IA +   I A
Sbjct: 250 SERMGMAIHMEAA------ARVCMEEAVSWARERKTFGKRLGDHQVIRHKIAMMKQKINA 303

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A       S +  +    + A  ++ A     +C +       EAM+ +GG G++   
Sbjct: 304 TQAYIRVCNESIERGEPNPADIALLKVQASEVMEFCAR-------EAMQVLGGLGFMRGS 356

Query: 429 SIARHYRESPANSILLGSGNAM 450
              R YRE   N+I  GS   M
Sbjct: 357 RTERIYREVRVNAIGGGSEEIM 378


>gi|28900477|ref|NP_800132.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365630|ref|ZP_05778151.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260877430|ref|ZP_05889785.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260898911|ref|ZP_05907352.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|260901255|ref|ZP_05909650.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|28808857|dbj|BAC61965.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089187|gb|EFO38882.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|308090576|gb|EFO40271.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308106793|gb|EFO44333.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308111450|gb|EFO48990.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 384

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T  V   + PK+ + E+                LG   LTE   G+D A++++ 
Sbjct: 96  MVASFATEDVGAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLSTT 139

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  D  Y L+G K F+S +  +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 AHKKGD-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQADGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G +  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D   S      
Sbjct: 256 LNQATQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDSD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   +  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDIGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|295677259|ref|YP_003605783.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295437102|gb|ADG16272.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 596

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 59/365 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQTFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257
           D+A + ++ +   DG + L G K F++    D       ++LA+       V+G +  FL
Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIVHLVLARTPDAPDGVKG-ISLFL 229

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           VP+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +
Sbjct: 230 VPKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGALGQLIGEENRG---L 286

Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR 357
           E M I++      + + G+ +S     +A+ YA+ R  S  +         +I  P ++R
Sbjct: 287 EYMFIMMNAARFAVGMQGVAISDRAYQKAVAYAKERVQSRPVDGSAKQSVAIIQHPDVRR 346

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411
            ++ +     A+ AL++  A   D A    ++A  A+       + PI K W  +++  V
Sbjct: 347 MLSTMRSLTEASRALAYVAAAHCDIAHRHPDDATRAKHQAIYEYLVPIVKGWSTELSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
            +  ++  GG G+IEE   A++YR++    I  G+      D++    L  G  + ++L 
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTLRDGGKVAKELL 466

Query: 470 STLEQ 474
           + + +
Sbjct: 467 AGIAE 471


>gi|241202995|ref|YP_002974091.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240856885|gb|ACS54552.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 598

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 51/368 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +M P +T  ++ AL+    VH        S E   T    M   + +  + LTE   GTD
Sbjct: 125 MMYPGLTQGAIAALL----VHG-------SDEQKATYLPKMVDGTWSGTMNLTEPHCGTD 173

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP 259
           +  + ++    +DG Y +SG K F+S+   D       ++LA++EG       +  F+VP
Sbjct: 174 LGMLRTKAVPQADGSYKISGQKIFISAGEHDLTGNIIHLVLARIEGAPEGTKGISLFIVP 233

Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + L  +DG+P   N +    +++K+G  +NAT  + +    GFL+G  N     +  M  
Sbjct: 234 KFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMFVMMN 293

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADI 362
              L   +  ++   ++   A  YAR     R +SG          +I  P ++R +  I
Sbjct: 294 EARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTI 353

Query: 363 -ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            A + A       TAL   +A+   + K R        ++ PI K             A 
Sbjct: 354 RAFNEAGRAFLLWTALKSDIAHRASDEKERQTADDILGLVTPILKGVMTDKGFDHAVMAQ 413

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------LNLLEKGTNLFEQLFS 470
           +  GG GYIEE  ++++ R++    I  G+     LD+      LN       LF+++  
Sbjct: 414 QVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKLALNGGRAAMALFKEIGD 473

Query: 471 TLEQDLGS 478
             E++ G+
Sbjct: 474 FCEENRGN 481


>gi|91976675|ref|YP_569334.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683131|gb|ABE39433.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 379

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V 
Sbjct: 125 LAITEPSGGSDVANLRTTAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGDGPGGVS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL    LK K+G  ++ T  L F N     G LLG           M I++
Sbjct: 184 LLLIPGDTPGLTRTSLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGF-----MIIML 237

Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +S  +S     ++  RV L EA  YA+ R   G  L    V++  + D+A  IAA+ A
Sbjct: 238 NFNSERLSMAAGCIAASRVCLDEASAYAKERVTFGKPLSKHQVIRHKLVDMAQRIAASQA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA    + +S   E    +  A  T  +C        +EA++  GG+G++    + 
Sbjct: 298 MLELLAWRVQQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGFMRGVKVE 350

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE   N+I  G+   M
Sbjct: 351 RIYREVKVNAIGGGTEEIM 369


>gi|153011352|ref|YP_001372566.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563240|gb|ABS16737.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 597

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 146/340 (42%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ A++T  T      + PK+    +  T             + LTE   GT
Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + +      DG Y +SG K F+S+    MS+  I  +LA+++G       +  F+V
Sbjct: 173 DLGLLRTSAAPQKDGSYKISGQKIFISAGEHDMSENIIHLVLARIDGAPEGVKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G+P   NG+    ++ K+G   N+T  + +    GFL+G+ +     +  M 
Sbjct: 233 PKFILDENGNPGERNGVSCGSIEEKMGIHGNSTCVMNYDEAKGFLIGEAHKGLRAMFTMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361
               L  A+  +S    +   A  YAR     R +SG    D+        P ++R + +
Sbjct: 293 NEARLGVALQGLSIAETAYQNAAIYARERIQGRALSGAAAPDKKADPIIVHPDIRRNLMN 352

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I A + A       TAL+  +A+   +   R        ++ P+ K             A
Sbjct: 353 IRAFNEAGRALILWTALNSDIAHRAGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYIEE  ++++ R++    I  G+     LD++
Sbjct: 413 QQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|299533137|ref|ZP_07046522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718914|gb|EFI59886.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 587

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%)

Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           LTE   G+D+  + +Q    G+      + +SG K F+S    D       ++LA++ G 
Sbjct: 164 LTEAHAGSDLGQVRTQAVPVGESEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGA 223

Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  FLVP+LL  G  N +  +R++ K+G   + T  + F    G+L+G      
Sbjct: 224 PAGPKGLSLFLVPKLLPGGERNRVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGL 283

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351
             +  M     L  A+  +  +  +  +A  YA  RR+  + G             ++I+
Sbjct: 284 NAMFVMMNAARLHVALQGIGLLDAAWQKAHAYALERRQMRAPGAVPASRGTGDAADLIIE 343

Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P       ++RA  D    +A  T +   +A   + A+ R +   +  ++ P+ K    
Sbjct: 344 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARDAESAREREQAQQWCSLITPVLKAAWT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
           + A    +  ++  GG GYI E  I +  R+S    I  G+     +D+L   +L  G  
Sbjct: 404 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501
              Q   TL   L +       +LR    L          CKED  LA
Sbjct: 464 AMGQWLLTLRNSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 511


>gi|262377342|ref|ZP_06070566.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
 gi|262307795|gb|EEY88934.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
          Length = 607

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 37/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  + ++ +   DG Y +SG K F+S+   D       I+LA++    +G 
Sbjct: 165 LTEPQCGTDLGQVKTKAEPKEDGSYAISGTKIFISAGEHDLTENIVHIVLARLPDAPQGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ +       G  N +    +++K+G R++AT  L F N  G+L+G+ N  
Sbjct: 225 KGISLFIVPKFIAAADGGIGERNPVNCGSIEHKMGIRASATAVLNFDNATGYLIGEPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +AI  +    +S   A+ YA+ R              V+  I+   
Sbjct: 285 LHAMFTFMNTARIGTAIQGICHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344

Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
            V +  +   A+       +  + ++A++ ++A  R + AA+ +         PI K + 
Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAKIADNMNDALLRGDTAAFEQHDDHLGFYTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +M        M+  GG GYI+E  + +  R+S  +++  G+     LD++
Sbjct: 405 TEMGYEASNHGMQVFGGHGYIKEWGMEQIVRDSRISTLYEGTTGVQALDLI 455


>gi|226943853|ref|YP_002798926.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718780|gb|ACO77951.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 594

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 193/462 (41%), Gaps = 73/462 (15%)

Query: 151 LMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  ++ +L    +P     + P + S  +  T             + LTE   G
Sbjct: 124 VMCPGLTLGAIESLCAAASPEQKALYLPNLVSGRWSGT-------------MNLTEPDAG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FL 257
           +D+ A+  +  + +DG Y L G K F+S    D       ++LA+     EG  G   FL
Sbjct: 171 SDVGALRCKAIEQADGSYRLHGQKIFISYGEHDLTENIVHLVLARTPDAPEGVKGISLFL 230

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           VP+ L +     G+ N +     ++K+G   + T  L + +     G+L+G+ N     +
Sbjct: 231 VPKFLVNPDGSLGARNDVRCVSTEHKLGIHGSPTCVLAYGDREGATGYLVGEKNRG---L 287

Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPV-------MKRAI 359
           + M +++ +   I+ + G+ +S     +A+ YAR R      L  +PV       ++R +
Sbjct: 288 QAMFVMMNMARLIVGLEGVALSERAYQQALDYARERIQGVDALSGEPVAIVRHPDVRRML 347

Query: 360 ADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +   I A  ALS  +A + D A+       R    A+  ++ P+ K W  +    +  
Sbjct: 348 LSMKSQIEAMRALSLVIAQAQDLAQRHADPEVRRRNQAFVELLTPVFKAWATENGIRLTQ 407

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471
             ++  GG G++EE   A+H R++    I  G+      D++   L   G   F  L   
Sbjct: 408 LGVQIHGGMGFVEETGAAQHLRDAVIGVIYEGTTGIQAADLVGRKLARDGGAAFAALLRD 467

Query: 472 LE---------QDLGSSGKKV---ITILRDS----ISLCKEDKGLARFLTEK-IALASSA 514
           +          +DLG  G  +   I  LR +    + L ++D   A  ++   + LA + 
Sbjct: 468 MSDVAEELQRHRDLGDIGSGLAGGIASLRQAGEHILPLYRDDAQAALAVSVPFLMLAGTV 527

Query: 515 AALYRAGMNDIADV-FLENRFLDNCHSTHCMLHGRFNAAHII 555
           A  ++ G   +A    +E R          ++  RF  AH++
Sbjct: 528 AGAWQHGRGALAAARLIEARGEPGAFLKGKLVSARFYVAHVL 569


>gi|138895108|ref|YP_001125561.1| butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196248310|ref|ZP_03147011.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|134266621|gb|ABO66816.1| Butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196212035|gb|EDY06793.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 380

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 21/266 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238
           S E   T   PM K       GLTE   G+D     +    + DG  Y ++G K ++++ 
Sbjct: 103 SEEQKQTWLVPMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNA 160

Query: 239 MSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                +++  V G+   G  ++  L+      G   +   +K+G R++ T EL F N   
Sbjct: 161 QYARQVIVTAVTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV-- 218

Query: 297 FLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILI 350
             +   NV   P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  + 
Sbjct: 219 -RVPKENVLGDPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSIS 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +AD+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C     
Sbjct: 278 KFQAIQFKLADMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN---- 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRE 436
              +A++  GG GY++E  + RH R+
Sbjct: 334 ---QAIQIHGGYGYMKEYGVERHLRD 356


>gi|307294247|ref|ZP_07574091.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880398|gb|EFN11615.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 388

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           PM      + + +TE   G+D+  +    +K ++G Y L+G K F+S+  +++  ++ A+
Sbjct: 121 PMCTGEYILAIAMTEPGAGSDLQGMKMSARK-TEGGYLLNGQKTFISNGQIANLILVAAK 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF----------- 295
            + + G   +   + D    G  ++R +N  K+G     T EL F + F           
Sbjct: 180 TDTQAGSKGISLFIVDTEQAGDSFRRGRNLEKVGQEGQDTSELYFDDVFVPDDCVLGGAP 239

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G  +G L ++  P E + I      A  +++ +  ++AE I Y R R + G  LID    
Sbjct: 240 GLGMGQL-MAKLPQERLVI------AWQAMAMIERAVAETIAYVRDRKMFGQALIDFQNT 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+I     A  A  F      D       +       A + KYW    A  +I E 
Sbjct: 293 QFKLAEIK--TTATIARVF-----LDHCTRLQLDGKLDASTASMAKYWISDRASEIIDEC 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           ++  GG GY+ E  IAR YR+S  + I  G+   M L
Sbjct: 346 LQFFGGYGYMLEYPIARLYRDSRIHRIYGGANEVMKL 382


>gi|325968201|ref|YP_004244393.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
 gi|323707404|gb|ADY00891.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
          Length = 402

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 21/273 (7%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV---GCFLV 258
           TE   GTDI  + +  +K  D  Y + G K F++ +P +   ++LAQ E      G  L 
Sbjct: 133 TEPEHGTDITQLNTVAEKKGDK-YIIRGMKTFITNAPTAKYGLLLAQTEPEKRHRGQTLF 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++    P G+  +RL  K+G R+    E+   N     +   NV  G  + +    Y 
Sbjct: 192 --IIHTDWP-GITIRRLTGKMGQRTIPVGEIYLDNV---EVPAENVLGGEEKGLNQGFYW 245

Query: 319 DSAIMSVS-------GMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             A  +VS       G+ ++LA   +A+ YA++R+  G  LI+  +++  +A +A+ I A
Sbjct: 246 TLAYFNVSRIGVATLGLGIALAAFDKALEYAQKRNQFGQPLINFEMIQEKLARMAMLIEA 305

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A +L +R A   D+      +      +A   K +  ++A  V+ EA++  GG GY EE 
Sbjct: 306 ARSLIYRAAYYVDDYLKFKIDPRAMGAIAGAAKVYGTEVANYVVDEAIQIHGGYGYFEEF 365

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            + R++R+     I  G+    +L + + L +G
Sbjct: 366 DVERYWRDHRVTRIYEGTNEINLLTISDALRRG 398


>gi|171059219|ref|YP_001791568.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170776664|gb|ACB34803.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 596

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 138/284 (48%), Gaps = 40/284 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+AA+ ++ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLAAVRTRAEPQPDGTYKIFGTKIFITYGEHDMAENIVHLVLARVVGAPE 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ + +     G  N +    +++K+G +++ T  L+F +     G L+G
Sbjct: 221 GVKGISLFVVPKFMVNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGQLIG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI----- 348
             N     +E M I++      + V G+ V+     +A+ YAR     R V G +     
Sbjct: 281 QENRG---LEYMFIMMNAARFAVGVQGIAVAEMAYQKAVAYARDRVQSRPVDGSVAGSAA 337

Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +I  P ++R      A A+    +A  +A ++  ++S  + ++R +  A+   M P+ K 
Sbjct: 338 IIHHPDVRRMLSTMRAYAEGCRALALVSAAAYDASHSHPDPEARQQNQAFYEFMVPLIKG 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +M+  V +  ++  GG G+IEE   A+ YR++   +I  G+
Sbjct: 398 FSTEMSLEVTSLGVQVHGGMGFIEETGAAQFYRDAKILTIYEGT 441


>gi|71024205|ref|XP_762332.1| hypothetical protein UM06185.1 [Ustilago maydis 521]
 gi|46101856|gb|EAK87089.1| hypothetical protein UM06185.1 [Ustilago maydis 521]
          Length = 465

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 45/284 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+ +  +K  DG  + L+G K W  +S  ++ FI+ AQ +   G     
Sbjct: 205 LSEPSSGSDAFAMKTSCKKSDDGKTWTLNGSKMWITNSAEAEFFIVFAQSDASKGYKGIN 264

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F V + +      G+   + + K+G R+++T  L F         D+ V   P E++  
Sbjct: 265 AFAVEKSM------GVEIAKKEKKLGIRASSTCTLNFD--------DIKV---PAENLIG 307

Query: 313 ------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                 KI I  L+   + ++   + LA+     AI YA  R   G  +     M+  I+
Sbjct: 308 EEGKGYKIAIEILNEGRVGIAAQMIGLAQGAVDKAIRYAADRKQFGKKITQFQGMQFQIS 367

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            I ++I AA  L++  A   +E +  ++EAA A++ A        ++A      A+E  G
Sbjct: 368 QIMMEIEAARVLTYNAARLKEEGRPFTKEAAMAKLFA-------SQVAQRASGSAIEWCG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           G G+  E  I +++R+S   +I  G+ N M+  +  L+E+  +L
Sbjct: 421 GVGFTRETGIEKYWRDSKIGAIYEGTSNIMLETIFKLVEREMDL 464


>gi|89092344|ref|ZP_01165298.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Oceanospirillum sp. MED92]
 gi|89083432|gb|EAR62650.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Oceanospirillum sp. MED92]
          Length = 598

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 45/295 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247
           + LTE + G+D+AAI S  + + D  Y + G K F++     M++  I L          
Sbjct: 162 MNLTEPQAGSDLAAIRSTAKPVGDH-YRIKGQKIFITWGEHDMAENIIHLVLARLPDAPP 220

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
            V+G +  F+VP+ L  +DGS    N      L++K+G  ++ T  + F +     G+L+
Sbjct: 221 GVKG-ISLFVVPKFLVNDDGSLGERNDAKCVSLEHKLGIHASPTCVMAFGDDEGAIGYLV 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI------ 348
           G+ N     +  M     +++A ++V    V+++E     A+ YA  R  S  +      
Sbjct: 280 GEENRGLACMFTM-----MNNARLAVGLQGVAISERAYQHALEYAHDRVQSPPVGSREAA 334

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITK 401
            +I    ++R +  +     A  AL++    S D A        R++E+A A  + PI K
Sbjct: 335 PIIQHADVRRMLLTMKTMTEAGRALAYDACASLDFAHHSEDPAIRAKESARAAYLTPIVK 394

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            WC + A  V +  ++  GG G+IEE   A+HYR++    I  G+     LD++ 
Sbjct: 395 GWCTEFAQEVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTNAIQALDLVG 449


>gi|188583773|ref|YP_001927218.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179347271|gb|ACB82683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 587

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 138/298 (46%), Gaps = 27/298 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++A+ ++ +   DG Y ++G K +++    D       ++LA+++    
Sbjct: 160 MNLTEPQAGSDLSALRTRAEPRGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +  FLVP++L DG+ N L    +++K+G  ++ T  + F +     G+L+G+ N  
Sbjct: 220 GTRGISLFLVPKVLPDGTRNDLRCSGIEHKLGIHASPTCSMAFGDGGGATGWLIGEENRG 279

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357
              +  M     L+  +  V     +  +A+ YAR R         +PV        ++R
Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGAPEPVSAIVAHADVQR 339

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415
            +  +    AA+  + +  A + D A     +AA+ R  ++ P+ K +   +A  V +  
Sbjct: 340 MLLTMKAYTAASRGICYLTAQALDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           ++  GG G++EE   A+  R++    I  G+     +D++     L  G  +  Q+ S
Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLADGATVGAQIAS 457


>gi|212635305|ref|YP_002311830.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212556789|gb|ACJ29243.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 586

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 50/344 (14%)

Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S+T+ + +A+    T  + + + P ++S E+             A  + +TE + G+D+ 
Sbjct: 130 SLTAGAALAIHAHGTEAIKQQYLPMMYSGEW-------------AGAMDMTEPQAGSDLR 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED- 264
            I ++     DG Y ++G K F++    D       ++LA++    G   FLVP++  + 
Sbjct: 177 NIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVND 236

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G PNG+    +++K+G + +AT  + F +  G+L+G  N   G V    ++ Y   
Sbjct: 237 DNSLGLPNGVSVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPN--RGLVCMFTMMNYERL 294

Query: 321 AIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQPVMK-----RAIA 360
           AI  + G+  S A    A  YA+ R     +GG         IL+   V +     R + 
Sbjct: 295 AI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPILVHGDVRRMLLTVRTLT 353

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +    ++  T     LA   D  +++++ + Y  ++ P++K +           A +  G
Sbjct: 354 EAGRALSVYTGQQLDLAKYSDNGEAKAKASRYVGLLTPVSKAFLSDRGLDAAIMAQQVFG 413

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           G GYI E  I +  R++    I  G+     +D L     G NL
Sbjct: 414 GHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 457


>gi|224371965|ref|YP_002606131.1| Acd17 [Desulfobacterium autotrophicum HRM2]
 gi|223694684|gb|ACN17967.1| Acd17 [Desulfobacterium autotrophicum HRM2]
          Length = 604

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 154/347 (44%), Gaps = 58/347 (16%)

Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M P +T  +  +V    T    + +  K++S E+  T             + LTE   G
Sbjct: 125 MMYPGLTHGAGKLVEEFGTDEQKRVFLKKMYSGEWAGT-------------MLLTEPGAG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257
           +D+ A+T+  ++  DG + ++G K F+S     +++  I  +LA++EG       +  FL
Sbjct: 172 SDVGALTTTAKRNDDGTFSITGEKIFISGGEHDLTENIIHPVLARIEGAPEGTKGISLFL 231

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           VP+ L  EDGS    N +    +++K+G   N+T  L   +     G LLG+ N     +
Sbjct: 232 VPKFLVNEDGSLGEFNDVVCTGIEHKLGIHGNSTCSLALGSNGKCVGTLLGEENKG---M 288

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGIL------------IDQPV 354
           + M +++     ++   G   + A    A++YA++R     +L            I  P 
Sbjct: 289 KAMFVMMNEARLLVGFQGFACATASYMYAVNYAKQRIQGKNLLEMMDANAKAVPIIQHPD 348

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAY---ARIMAPITKYWCCKMA 408
           ++R +  +   +    ++ + +    D A   K  +E A Y     ++ PI K +    A
Sbjct: 349 VRRQLLKMKALVEGMRSILYYVNYCADMAAIGKDEAERAKYQGLVEVLTPIAKGYVTDRA 408

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             V ++ M+  GG G+IEE  +A+  R+     I  G+     +D+L
Sbjct: 409 FEVCSQGMQIYGGYGFIEEYPMAQLLRDCRITMIYEGTNGIQAMDLL 455


>gi|39934035|ref|NP_946311.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647883|emb|CAE26402.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 593

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 190/457 (41%), Gaps = 60/457 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114
            G+Y    TAQ L     + +  L      G++        KV   P W    +R I  G
Sbjct: 29  FGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +       F       A       ++  + +  G  + P +T +++ AL T  +  + +
Sbjct: 89  WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDALKQ 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T    MQ         LTE + G+D+ A+ ++ ++ +DG Y + G K
Sbjct: 147 VYLGKLISGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYRIFGSK 193

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275
            F++     M+D  +           A  +G +  FLVP+ L +     G+ N +    +
Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVNADGTLGARNDIYPSGV 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  ++ T  +   +     G+L+G+ N     +  M     L   +  V     + 
Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAA------TALSFRLA 377
            +A+ YA+ R     I         +I  P +KR +  +   I AA      TA++  +A
Sbjct: 313 QQALAYAQERKQGRAIGSAGPGSDPIIKHPDVKRTLLTMRALIGAARTICYSTAVALDIA 372

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + K ++  AA   ++ PI K +   +   V +  ++  GG G+IEE   A+HYR++
Sbjct: 373 ARSTDPKVKASAAARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
               I  G+     +D++   + G N    +F+ L++
Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGANGGASVFALLDE 468


>gi|213965498|ref|ZP_03393693.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium
           amycolatum SK46]
 gi|213951882|gb|EEB63269.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium
           amycolatum SK46]
          Length = 390

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 18/269 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           L +TE   G+D+A + +  +K  D  Y L+G K F+S+ M   F ++A +    +GR G 
Sbjct: 130 LAMTEPGAGSDLAGMRTFAKKDGDH-YVLNGTKIFISNGMMADFALVAAITDPSKGRAG- 187

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             V   + D    G        K+G ++  T EL F N       LLG+   + G +   
Sbjct: 188 --VSMFIVDADLEGFTKAGPLQKVGLKAQDTAELNFDNVRVPAENLLGEEGAAFGYLRTN 245

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A  SV+  R +   A  YA+ R   G  +I   V    +ADIA  + A  A 
Sbjct: 246 LAHERLTLACGSVATSRRAWTLAYKYAQEREAFGRPIIQHQVHGHYLADIATRVTALQAF 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                   D+A             A + KYW  +    ++   ++  GG G++ E  I+ 
Sbjct: 306 -------VDQAVMAHNAGQLDETGASMAKYWTTEEQQDIVTRCLQMFGGYGFMLEYPIST 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
           HY +S   +I  G+   M   +   + KG
Sbjct: 359 HYLDSKVQTIYGGTNEIMKEIIFRRIAKG 387


>gi|308050792|ref|YP_003914358.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307632982|gb|ADN77284.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 596

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 147/351 (41%), Gaps = 70/351 (19%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWA------PKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M P ++  +   LM     H D A      PK+ S E+  T             + LTE 
Sbjct: 125 MYPGLSHGAQATLM----AHGDEALQARFMPKLVSGEWTGT-------------MCLTEA 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254
             G+D+  + ++     DG Y L G K F+SS   D       I++A++EG       + 
Sbjct: 168 HCGSDLGLLRTKATPQEDGSYRLDGSKIFISSGDHDLAENIVHIVIARIEGAPAGTKGIS 227

Query: 255 CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            FLVP++   +DGS    NG+    +++K+G   NAT  + F    G+LLG+ N     +
Sbjct: 228 LFLVPKMAVADDGSITGRNGVSCGSIEHKMGIHGNATCVINFDGATGYLLGEPNRGLNAM 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------------ 353
                   +  A   V+    S   A+ YAR R     +SG    D+P            
Sbjct: 288 FTFMNAARVGVAAEGVAAAEASFQGALAYARERLQMRSLSGIKAPDKPADPIIVHPDVRR 347

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWC 404
             + ++AIA+         AL + +A+  D +KS       R    A   ++ PI K + 
Sbjct: 348 MLLTQKAIAE------GGRALVYEMASWVDISKSSTVSSEARQRAEARLSLLTPIAKAFL 401

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +M     +  ++ +GG GY+ E  + +  R++  + +  G+     LD+L
Sbjct: 402 TEMGFEATSLGVQVLGGHGYVAEWGMEQLMRDTKISCLYEGTTGIQALDLL 452


>gi|213422064|ref|ZP_03355130.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 167

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 6/162 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
           AQ+EAG L   ++T +A+ + L   P    DW   + S  YD
Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYD 166


>gi|188591193|ref|YP_001795793.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|170938087|emb|CAP63071.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 595

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 59/346 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP + + + PK+ S  +  T             + LTE   GT
Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + S+ +  +DG Y ++G K F+S+   D       ++LA++         +  F+V
Sbjct: 174 DLGILRSKAEPQADGSYRITGTKIFISAGEHDLAENIIHLVLARLPDAPAGTKGISLFVV 233

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + D  G+P   NG+    +++K+G   NAT  +      G+++G+ N          
Sbjct: 234 PKFIPDASGNPGERNGIQCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------------HVSGGILIDQPVMK 356
           + + +++A + V    + L E     ++ YA+ R              +   +I  P ++
Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPEKAADPIIVHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +           A S+  A   D   S  +EA   +      ++ P+ K +    A  
Sbjct: 349 RMLLTQRAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              E M+  GG GYI E  + ++ R++  N I  G+     LD+L 
Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLG 454


>gi|190890257|ref|YP_001976799.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190695536|gb|ACE89621.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 598

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 37/344 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206
           H      TSA+ ++LM  P + +     I    ++E   T    M   S +  + LTE  
Sbjct: 110 HCAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGTMNLTEPH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255
            GTD+  + ++    +DG Y +SG K F+S+   D       ++LA++EG       +  
Sbjct: 170 CGTDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISL 229

Query: 256 FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNVST 306
           F+VP+ L  +DG+P   N +    +++K+G   NAT  + +    GFL+G     LN   
Sbjct: 230 FIVPKFLVGKDGAPGARNAVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRA 358
             + + ++++ L    +S    + + A A    + R +SG          +I  P ++R 
Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAAAYARDRIQGRSLSGVKAPDKKADPIIVHPDIRRT 349

Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  I A + A       TAL   +A+   + K R        ++ PI K           
Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERRTADDILGLVTPILKGVMTDKGFDHA 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A +  GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453


>gi|329888332|ref|ZP_08266930.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328846888|gb|EGF96450.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 375

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 32/301 (10%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219
           L T   VH         RE   + KA   P       IG   LTE   G+D AA+T++  
Sbjct: 81  LSTVVSVHNAPVVAALVREGTESQKATFLPSLCGGEMIGAFALTESGAGSDAAALTTRAI 140

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQ 273
           +   G + ++G K F++S  +    ++  V     G+ G   FLVP         GL   
Sbjct: 141 Q-EGGDWRINGAKQFITSGRTAGLTIIFAVTNPVLGKKGLTAFLVPS-----GAKGLLVD 194

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332
           ++++K+G  ++ T  L+F +    +L D     G  E  +I L  L++  + ++   V +
Sbjct: 195 KVEHKMGQHASDTCALKFED---LILNDGLRLGGEGEGYRIALANLETGRIGIAAQSVGM 251

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ YAR R   G  ++D   +   +AD+A  + AA  L    A++ D  +   
Sbjct: 252 AQSALEVAVKYARERVAFGKPIMDHQAVGFRLADLAARLEAARQLVLHAASTKDAGRPCL 311

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EA+ A+++A  T       A AV + A++ +GG GY+EE  +A+ YR+     I  G+ 
Sbjct: 312 KEASMAKLIASET-------AEAVCSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTS 364

Query: 448 N 448
           +
Sbjct: 365 D 365


>gi|209886008|ref|YP_002289865.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
 gi|209874204|gb|ACI94000.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
          Length = 597

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + G+D+ A+ +  +  +DG Y LSG K F++    D       ++LA++ G     
Sbjct: 163 LTEPQAGSDVGALRTHAETQADGSYRLSGTKIFITYGDHDMTENIVHLVLARLPGAPEGT 222

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  F+VP+ L +     G+ N +    L++K+G   + T  +   +     G+LLG+ 
Sbjct: 223 KGISLFVVPKFLVNADGSLGARNDIYASGLEHKLGIHGSPTCTMTMGDHGGAVGYLLGEE 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQP 353
           N     +  M     L   +  V     ++ +AI YAR R     I         +I  P
Sbjct: 283 NNGMACMFTMMNQARLGVGLEGVGIAERAMQQAIAYARERRQGRAIGKKDGGPDPIIVHP 342

Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +KR      A+   A  I  ATA++  +A    +   R++ +A A ++ P+ K +   +
Sbjct: 343 DVKRNLVTMRALTAAARTICYATAVAIDVARESTDENIRTKASARAGLLTPLAKAFSTDI 402

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A    A  ++  GG+G+IEE   A++ R++   +I  G+      D++
Sbjct: 403 ANDAAALGVQVHGGAGFIEETGAAQYIRDARILTIYEGTNGIQANDLV 450


>gi|254702972|ref|ZP_05164800.1| hypothetical protein Bsuib36_03344 [Brucella suis bv. 3 str. 686]
          Length = 110

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 64/107 (59%)

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           DV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LTE++A A+
Sbjct: 1   DVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLTEQLAFAA 60

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           +AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 61  AAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 107


>gi|108762147|ref|YP_631178.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108466027|gb|ABF91212.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 379

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 13/304 (4%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +S S+ +   +AL+   ++      +I + E       P  K      LG++E   G+D+
Sbjct: 76  LSRSLNAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEKIAALGVSEPGCGSDV 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A+I +  ++  D  Y ++G K ++++     FI LA   G  G   +  +       G  
Sbjct: 136 ASIKTTARRDGDD-YVINGSKMWITNGTRADFITLAVRTGEAGYGGISLVTFPTDVKGFG 194

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +  +K+GN S+ T  L F +      ++LG+ N     +        L  AI +V+GM
Sbjct: 195 VSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQGERLVGAITTVAGM 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + ++I Y   R   G  L+   V +    +    I AA  L++   + FD  ++  +
Sbjct: 255 ERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDRKENPVK 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E + A++ A         +A  V  +  +  GG GY+EE SIAR +R+     I +G G 
Sbjct: 315 EVSMAKLFA-------GDLAQRVAYDCQQFYGGMGYVEETSIARMWRD--VRLITIGGGT 365

Query: 449 AMVL 452
           + V+
Sbjct: 366 SEVM 369


>gi|83859545|ref|ZP_00953065.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851904|gb|EAP89758.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 593

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 61/346 (17%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ +  AL+      +   + PK+FS E+  T             + LTE   GT
Sbjct: 125 MYPGLTNGAAQALLVGGSQEQKELYLPKMFSGEWSGT-------------MNLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++     DG Y +SG K ++S+    MS   +  +LA+VEG       +  F+V
Sbjct: 172 DLGMLRTKAVPQGDGTYKISGQKIWISAGEHEMSGNIVHLVLARVEGAPQGVKGISLFVV 231

Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L D  G+P   N L    L+ K+G   NAT  + +    G+L+G+ N      + +K
Sbjct: 232 PKYLPDADGNPGERNSLKCGGLEEKMGIHGNATCVMNYDEATGWLVGEEN------KGLK 285

Query: 314 ILIYL----------DSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVM 355
           I+  +              ++ +  + SLA A    + R ++G          +I  P +
Sbjct: 286 IMFVMMNEARLGVGLQGLGLAETAYQYSLAFAKDRIQGRSLTGPKNPDGPADPIIVHPDV 345

Query: 356 KRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R + D  + +  A      TAL   L +  ++   R +   +  ++ PI K +      
Sbjct: 346 RRMLMDQKVFVEGARAFTYWTALQGDLEHKAEDEAVREKAGDFMALLTPIVKGYLTDKGY 405

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             ++  ++  GGSG+  E  I +  R++    I  G+     LD++
Sbjct: 406 ESVSTGLQVHGGSGFTREWGIEQLLRDARITLIYEGTNGVQALDLV 451


>gi|126730544|ref|ZP_01746355.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126709277|gb|EBA08332.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 532

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 137/326 (42%), Gaps = 34/326 (10%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P +  +W PK+ S E+  T             + ++E   G+D+  I ++     DG + 
Sbjct: 134 PDLAAEWCPKLASGEWAAT-------------ICISEPDAGSDVGRIRTKAMPAGDG-WT 179

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCYQRLK 276
           +SG K ++S    D       + LA+     +G  G   FLV   L+DG+ NG+  +R++
Sbjct: 180 VSGTKCWISFGDHDMAERIGHLCLARTGAPEDGTRGLSLFLVADTLDDGTRNGIFVERIE 239

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   + T  L F      L+G        + +M  L+ L   +            A 
Sbjct: 240 EKLGLHGSPTCVLRFETAEASLIGTPGRGLPALFNMIELMRLQVGVQGAGVAATCATLAR 299

Query: 337 HYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEE 389
            YA  R   G        +   P ++R +  +      ATAL    A +  +A +  +E 
Sbjct: 300 DYADDRRQGGRPDAAPVAIASHPDVRRQLWQMEARALIATALVVETAVTLGDAHAGNTEA 359

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA +  + P+ K +  ++  A    A++ +GG+GY  E    RH+R+    ++  G+   
Sbjct: 360 AALSAFLLPLAKTFGGELGQANADAAIQVLGGAGYTREWPAERHFRDVRITTVYEGTTGM 419

Query: 450 MVLDVL--NLLEKGTNLFEQLFSTLE 473
              DVL   LL+ G  +   L + L+
Sbjct: 420 QAQDVLFRRLLKDGPAIRAALLARLD 445


>gi|153004046|ref|YP_001378371.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152027619|gb|ABS25387.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 381

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP  +      L ++E   G+D+AAI +  ++  D +       W  +   +D F+ +A 
Sbjct: 115 APAIRGEKVAALAISEPDAGSDVAAIRTTARRDGDALVVNGAKMWITNGARAD-FLTMAV 173

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
             G  G   +  LL      G    R   K+GN S+ T  L F +      +LLG+ N  
Sbjct: 174 RTGGEGHEGISLLLFPTDTPGFQVSRTLEKVGNPSSDTALLFFEDCRVPARWLLGEENQG 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              V        L +A+ +V+GM++ + +A+ YA  R   G  L    V +  +A+    
Sbjct: 234 FYHVMANFQGERLVAAVQAVAGMQLMVEDAMRYAGERSAFGRPLARMQVWRHKLAEHLTA 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L++R  +     +   +E + A++ A       C++A  V  + M+  GG GY+
Sbjct: 294 IEAARWLTYRACDLLQRGEPAVKEISMAKLFA-------CELAQRVAYDCMQLHGGMGYV 346

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  +AR +R+    +I  G+   M
Sbjct: 347 LETDVARAWRDVRVMTIAGGTSEIM 371


>gi|68536548|ref|YP_251253.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577688|ref|ZP_05845623.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264147|emb|CAI37635.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604083|gb|EEW17325.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 391

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 17/271 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           L +TE   G D+A I +  +K  +G Y ++G K F+S+ +   F +L  V    +GR G 
Sbjct: 131 LAMTEPGAGADLAGIRTFAKKDENGDYIVNGAKTFISNGVQADFTLLVVVTNPEKGRAGV 190

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            ++  ++EDG         LK K+G +S  T EL F +T      LLG+   + G +   
Sbjct: 191 SML--IVEDGMEGYTKTGPLK-KVGLKSQDTAELSFEDTRVPKENLLGEEGAAFGYLRTN 247

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ S++  R +      +++ R   G  LID    +  +A +A +I  +   
Sbjct: 248 LAQERLSIAVGSIATSRRAFDLVYKHSQDRKTFGQRLIDHQAYRWELAKMATNIQGSQ-- 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           SF  A   ++     +E     +   + KY   ++   V+ EA++  GG G++ E  I+ 
Sbjct: 306 SFVDACIMEKVNGTLDE-----VTGAMAKYQTTELQIEVVNEALQLHGGYGFMLEYPIST 360

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           HY +S    I  G    M+  +   L KG N
Sbjct: 361 HYLDSRVQPIYGGPNEIMIEIISRRLAKGEN 391


>gi|297616645|ref|YP_003701804.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144482|gb|ADI01239.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 608

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 54/339 (15%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A ++    +  + + + PK++S ++  T             + LTE + G+D+   T++
Sbjct: 134 AAGLIRDFGSEELKRIYLPKMYSGQWAGT-------------MVLTEPQAGSDVGDATTR 180

Query: 218 GQKISD-GIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLE-- 263
                + G+Y + G K F+S    D       ++LA++EG       +  F+VP+ L   
Sbjct: 181 AIPTDEPGVYLIKGTKCFISGGEQDVTENIVHLVLARIEGAASGTRGLSLFVVPKYLPNA 240

Query: 264 DGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIY 317
           DG+P   N +    +++K+G+R + T  L F       GFLLGD     G  + M  +  
Sbjct: 241 DGNPGEWNDITCVGIEHKLGHRGSPTCVLNFGEEGKCKGFLLGDPPGEDGSGQGMAQMFR 300

Query: 318 LDSAIMSVSGMR-VSLA-----EAIHYARRR---------HVSGGILIDQPVMKRAIADI 362
           + +    +SG+   +LA      A+ Y + R               +I    +KR +   
Sbjct: 301 MMNEERLMSGLSGCALAASAYHNAVKYCQERIQGRAATNPKAGRCAIIKHEDVKRMLMFQ 360

Query: 363 ALDIAAATALSFRLANSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              + A  A++ +     D  K  S      +   +  +  PI K +C  +A   I+EA+
Sbjct: 361 KAHVEAFRAMAIQTYYWVDIEKYSSDPDLVQQAKVFLEVNTPIVKAYCSDVALQCISEAL 420

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +C GG G+ EE  IA  YR++    I  G+     LD++
Sbjct: 421 QCYGGYGFSEEYPIAEIYRDARIYPIWEGTNYIQALDLV 459


>gi|264680266|ref|YP_003280176.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210782|gb|ACY34880.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 535

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%)

Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           LTE   G+D+  + +Q    G+      + +SG K F+S    D       ++LA++ G 
Sbjct: 112 LTEAHAGSDLGQVRTQAVPVGESEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGA 171

Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  FLVP+LL  G  N +  +R++ K+G   + T  + F    G+L+G      
Sbjct: 172 PAGPKGLSLFLVPKLLPGGERNRVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGL 231

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351
             +  M     L  A+  +  +  +  +A  YA  RR+  + G             ++I+
Sbjct: 232 NAMFVMMNAARLHVALQGIGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIE 291

Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P       ++RA  D    +A  T +   +A   + A+ R +   +  ++ P+ K    
Sbjct: 292 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPVLKAAWT 351

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
           + A    +  ++  GG GYI E  I +  R+S    I  G+     +D+L   +L  G  
Sbjct: 352 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 411

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501
              Q   TL   L +       +LR    L          CKED  LA
Sbjct: 412 AMGQWLLTLRNSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 459


>gi|254471938|ref|ZP_05085339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062]
 gi|211959140|gb|EEA94339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062]
          Length = 598

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ +M AL+      +   + PK+ + E+  T             + LTE   GT
Sbjct: 126 MYPGLTAGAMAALLVHANDEIKNTYLPKMVTGEWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y +SG K F+S+   D       ++LA++EG       +  F+V
Sbjct: 173 DLGMLRTKAAPQGDGSYKISGTKIFISAGDQDLSENIVHLVLARIEGAPEGTKGISLFVV 232

Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P  +L  DG+P   NG+    ++ K+G   NAT  + +  + G+L+G+ N     +  M 
Sbjct: 233 PKKKLDADGNPGEMNGVSVGSIEEKMGIHGNATCVMNYDESVGYLVGEENKGLRAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L   I  ++   V+   A+ YA+ R                  +I  P ++R +  
Sbjct: 293 NEARLGVGIQGLAQSEVAYQNAVTYAKDRIQGRSLTGPKNPEKQADPIIVHPDVRRVLMT 352

Query: 362 IALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMA---PITKYWCCKMAPAVIAEA 415
           I     AA AL    +   D    ++  +E+ A   IM    P+ K             A
Sbjct: 353 IRSFNEAARALYMWTSLHGDVSHLSQDDAEKQASDDIMGLLTPVVKGVLTDKGFDNTVMA 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG GYI+E  + +  R++    I  G+     LD++
Sbjct: 413 QQLYGGHGYIQEWGMEQFVRDARIAMIYEGANGVQALDLV 452


>gi|118467998|ref|YP_888269.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169285|gb|ABK70181.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 377

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 44/341 (12%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK--IFSREYDPTNKAPMQKTSV-AI 198
           L AQ  A   +S +  S +MV L+       +WA    +  +  D   K  +   S  A+
Sbjct: 62  LAAQAIAVEELSAACASTAMVLLV-------NWAGTCTVIHQGSDELKKLVVPDVSTGAV 114

Query: 199 GLG--LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGR 252
           G G  LTE  GG+D++ I ++ Q+  DG  + L+G K F+S +   D F +LA+   E  
Sbjct: 115 GAGWCLTEPTGGSDLSGIRTKAQR--DGSDWVLNGQKRFISNADWGDWFAVLARSGEENE 172

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE--LEFSNTFG-FLLGDLNVSTGPV 309
            G F+V +     S  GL +   + K+G R + T +  LE     G  ++GD      P 
Sbjct: 173 FGVFMVHK-----SDAGLSFGPPEKKMGLRGSPTADVILEDCRIPGERVVGD------PT 221

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K +I  L+ +   ++   + LA+     AI Y   R   G  L    +++  +AD A
Sbjct: 222 QGYKYIIDELNGSRALIAAQALGLAKGALRTAIEYTAERRQFGSALSTFQMVRAMVADAA 281

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + + +A+AL ++  ++ +    R      AR +  + K  C   A AV  +A++ +GG G
Sbjct: 282 IRVESASALLYKAVDAIENKDPR------ARSLVSMAKVLCSDNAMAVTTDAVQLLGGYG 335

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +  E  + R  R++    I  GS     L +   L KG  L
Sbjct: 336 FTREYPVERMMRDAKVTQIYEGSNQIQRLVISKGLYKGEAL 376


>gi|312898450|ref|ZP_07757840.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
 gi|310620369|gb|EFQ03939.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
          Length = 379

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 36/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-F 256
             LTE   G+D  ++++Q  K  DG  Y L+G K F+++  +++ F++ A      G   
Sbjct: 121 FALTEPGTGSDAGSVSTQATKTEDGKGYILNGTKCFITNGALAEVFVVFANTRKGGGVRG 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED----- 311
           L   +++ G+P G    + +NK+G R++ T EL F + F            P+ED     
Sbjct: 181 LTAFIVKKGTP-GFSVGKAENKMGIRASNTTELIFQDCFV-----------PMEDRLGRE 228

Query: 312 ---MKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362
               +I +  LD+A   V  + V +AEA   A   +    +  D+P+     ++  IAD+
Sbjct: 229 GQGFRIAMNTLDAARPFVGAVSVGIAEAAFRACTEYAKVRVQFDKPIASFQMVQAMIADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ +  A  L  R     D+    S EAA A+  A         +A  V  +A++ +GG 
Sbjct: 289 AMKVEGARLLVQRACWMKDQGMDFSREAAIAKCNAS-------DVAMQVTTDAVQVMGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GYI+E  + ++ R++    I  G+     L + N
Sbjct: 342 GYIKEYPVEKYMRDAKIMQIYEGTNQIQRLVIAN 375


>gi|300814959|ref|ZP_07095187.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300510929|gb|EFK38201.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 642

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T    ++    Y L+G K F++ +P +D +++ A 
Sbjct: 112 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAV 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G  +    +K+G RS++T EL F+      +   N+    
Sbjct: 171 TTPGIGTHGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELTFNKV---KVPKENLLGQE 227

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  +I +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   IAD+
Sbjct: 228 GQGFRIAMQTLDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADM 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I AA  L +  A      +  S EAA A+  A  T  +C         EA++  GGS
Sbjct: 288 ATKIRAARLLIYSAAEMKTNHEKYSMEAAMAKTYASETALFCAN-------EALQIHGGS 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY++   + R YR++   +I  G+     + V N
Sbjct: 341 GYMKGMEVERFYRDAKITTIYEGTSEVQRVVVAN 374


>gi|146278496|ref|YP_001168655.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556737|gb|ABP71350.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 562

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 46/320 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ + + DG + ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLPDGTHAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279
           +   +D       ++LA++         +  FLVP+ L D  G+P   N +    L+ K+
Sbjct: 197 TWGDTDFNANVCHLVLARLPDAEPGTRGISLFLVPKFLPDADGNPGPRNAVSVVSLEEKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHY 338
           G   + T  ++++   G+L+G       P + M  +   +++A + V    V +AEA   
Sbjct: 257 GLHGSPTAVMDYAEAKGWLVG------APHKGMAAMFTMMNNARLGVGAQGVGVAEAATQ 310

Query: 339 A------RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEA 390
           A       RR    G +I    ++R +A +  +  +A A++   A + D   A  +SE  
Sbjct: 311 AAVAYAMERRQGGQGTIIGHADVRRMLAVMRAETFSARAIALACAVAIDMGRATGQSEWQ 370

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I  G+    
Sbjct: 371 ARAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQ 430

Query: 451 VLDVLN--LLEKGTNLFEQL 468
            +D++   +++ G   F  L
Sbjct: 431 AMDLVGRKMMDGGEAAFRLL 450


>gi|71907187|ref|YP_284774.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71846808|gb|AAZ46304.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 597

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 174/377 (46%), Gaps = 67/377 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T+ +  AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 125 IGPLLTTGATEALLTCASDELKSIYLEKMVTGEWTGT-------------MNLTEPQAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A I S+ +  +DG Y + G K F+S     M+D  + L         A V+G +  FL
Sbjct: 172 DLALIRSRAEPQADGSYRVFGQKIFISYGDHDMTDNIVHLVLARLPDAPAGVKG-ISMFL 230

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           VP+ + +     G+ N      +++K+G  ++ T  + + +     G+LLG+ N     +
Sbjct: 231 VPKFMVNADGSLGARNDAHCVSIEHKLGIHASPTCVMAYGDNGGAVGYLLGEANRG---L 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGILI---DQPVMK 356
           E M   I ++ A + V    V+L E     A+ YAR R      ++G  L+     P ++
Sbjct: 288 EYM--FIMMNEARLGVGLQGVALGERAYQHALAYARERKQGRDALTGEALVTLDKHPDIR 345

Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +   + A+ A ++  A+  D      + + +      A  + PI K    +M   
Sbjct: 346 RMLMLMKTRVEASRAATYYTASLLDRVHAINDPEEKKRNLYLAEFLIPIVKGGGTEMGIE 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN---L 464
           V +  ++  GG G+IEE   A+H+R+S   +I  G+      D+L    + ++G     +
Sbjct: 406 VTSLGIQIHGGMGFIEETGAAQHWRDSRITTIYEGTTGIQANDLLFRKLMRDQGATAKVV 465

Query: 465 FEQLFSTLEQDLGSSGK 481
           F ++++T  + LG+SGK
Sbjct: 466 FGEVYAT-AKTLGASGK 481


>gi|330505312|ref|YP_004382181.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919598|gb|AEB60429.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 592

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 36/314 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+++ +     G  N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKVMVNADGSLGEKNALGCGSIEHKMGIKASATCVMNFDGATGYLIGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +S    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLSLGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++A   R      ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDKATAKRADELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
           A        +  GG G+I E    +  R+     I  G+     LD++   ++  G + +
Sbjct: 406 ALETTVHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQSLDLVGRKIVGSGGSYY 465

Query: 466 EQLFSTLEQDLGSS 479
           +     ++  +GS+
Sbjct: 466 KHFADEIKAFVGSA 479


>gi|296284062|ref|ZP_06862060.1| putative acyl-CoA dehydrogenase protein [Citromicrobium
           bathyomarinum JL354]
          Length = 601

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 155/366 (42%), Gaps = 51/366 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ ++ AL+   +    + + PK+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTNGAISALIAKGSQEQKEKYLPKMVSCEWTGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  I ++ +  +DG Y ++G K F+S+   D       ++LA+  G       +  F+V
Sbjct: 173 DLGLIRTKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLAKTPGAPDSSKGISLFVV 232

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  +DGS    NG+    +++K+G   N+T  + + +  G+++G+ N     +  M 
Sbjct: 233 PKFLVNDDGSVGDRNGVMCGSIEHKMGIHGNSTCVMNYDDAKGWMVGEENKGLAAMFIMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGILIDQ--------PVMKRAIAD 361
               L   I  +S   VS   A+ YA  RR  R ++G    D+        P ++R + D
Sbjct: 293 NAARLGVGIQGLSQAEVSYQNAVTYALDRRQGRALTGPAEPDEKADPIFVHPDVRRMLMD 352

Query: 362 IAL------DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                      A  TAL   L+++  +   R        +M P+ K +       V    
Sbjct: 353 AKAFNEGMRAFALWTALQQDLSHALQDEDERQLADDLVGLMTPVIKGYGTDKGYDVANNM 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            +  GG GYI E  + +  R++    I  G+     +D+    L   G    +  F  ++
Sbjct: 413 QQVYGGHGYIAEWGMEQFVRDARIAMIYEGTNGIQAMDLAGRKLAMHGGRAVQAFFKLVD 472

Query: 474 QDLGSS 479
            ++ S+
Sbjct: 473 DEVASA 478


>gi|15898849|ref|NP_343454.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2]
 gi|284173359|ref|ZP_06387328.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus 98/2]
 gi|13815346|gb|AAK42244.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2]
 gi|261603260|gb|ACX92863.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus
           98/2]
          Length = 371

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 33/261 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K  +     LTE  GG+DI ++ +  +K  +G + + GHK W      +D FI +A+
Sbjct: 102 PLSKGEIIGSFALTEPSGGSDIGSMKTLAEK-RNGSWIIKGHKMWITQGLYADVFITVAK 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR          C +  K ++ GNR   T E+ F N   +  +++G+
Sbjct: 161 TGSSRRDLSVFIVPR--------SNCVETRKIEVMGNRGTGTAEVIFHNCEVSNDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LA     EA  +A+ R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEAFKWAKSRFAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              AD    + A  +++  +++ FDE  +  ++  Y  ++    K     +A  VI  ++
Sbjct: 268 WYFADAIAKLNAVKSMAKDVSSKFDE--NSKDKGVYVSML----KLLSANIANEVIDISL 321

Query: 417 ECIGGSGYIEERSIARHYRES 437
           +  GG GY +  +I R YR++
Sbjct: 322 QVFGGMGYAKGTNIERIYRDA 342


>gi|89070202|ref|ZP_01157530.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
 gi|89044218|gb|EAR50369.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
          Length = 563

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/333 (21%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L+ G LMS     A  ++    P +   + P++ S E+  T             + LTE 
Sbjct: 122 LQLGPLMSQGAIEA--LSHHAAPELQALYLPRLVSGEWCGT-------------MNLTEP 166

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254
           + G+D+ A+ ++ +   DG Y ++G K +++   +D       ++LA++         + 
Sbjct: 167 QAGSDVGALRTRAEPADDGTYRITGEKIYITWADNDFTENVCHLVLARLPDAAPGSKGIS 226

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            FLVP+ L D     G+ N L    L++K+G   + T  + +     +L+G  +     +
Sbjct: 227 LFLVPKRLPDADGRPGAANALRVVSLEHKLGLHGSPTAVMAYEGATSWLVGPPHGGLAAM 286

Query: 310 EDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             M    ++ + L    ++ + ++++L  A    + R    G +I+   ++R +A +  +
Sbjct: 287 FTMMNNARLGVGLQGIGVAEAALQLALGHASERRQGRAGGEGTIIEHADVRRMLAQMKAE 346

Query: 366 IAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             AA A++   A + D   A    E +A A ++ P+ K +       V +  ++  GG G
Sbjct: 347 TFAARAIALDCARAIDMETATGAPEWSARAALLTPVAKAFGTDTGFDVASTGVQVHGGMG 406

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +IEE   A++ R+    SI  G+     +D++ 
Sbjct: 407 FIEETGAAQYLRDVRVTSIYEGTNGIQAMDLVG 439


>gi|163849086|ref|YP_001637130.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222527059|ref|YP_002571530.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163670375|gb|ABY36741.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450938|gb|ACM55204.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 394

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 16/238 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           LTE   G+D A I +  +++S G Y L+G K W  ++  +D  ++ AQ E  GR+G FLV
Sbjct: 137 LTEPYVGSDAAHIRTTAKRVSGG-YLLNGAKRWIGNATFADVIVVWAQDEETGRIGGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316
               E G+P G    +++ KI  RS    ++   N F      L ++    +   IL   
Sbjct: 196 ----EKGTP-GYRATKIEGKIAKRSVINADITLENVFVPEENRLPLARSFRDTANILKNT 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  +V   + +   A+ Y  +R   G  +    ++++ +  +  D+ A   +++RL
Sbjct: 251 RYGVAWEAVGHAQAAYELALEYTLQREQFGRPIAGFQLVQQKLVHMLGDLTAIQLMAWRL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +   DE +S+  E      MA + K +C   A  ++A   E +GG+G + +R IARH+
Sbjct: 311 SKLRDEDESQITEG-----MASLAKQYCAAKARQIVALGREVLGGNGILLDRHIARHF 363


>gi|329888447|ref|ZP_08267045.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847003|gb|EGF96565.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 593

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 60/346 (17%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +TS +   +    +  + + + PK+ S E+  T             + LTE + GT
Sbjct: 124 MYPGLTSGAFHGIEASASDEIKQKYLPKMASGEWTGT-------------MNLTEPQCGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGRV------GCFLV 258
           D+  + ++  K  DG Y ++G K ++S+     +D  I  +LA+VEG V        F+V
Sbjct: 171 DLGMVRTKAVKNDDGSYSITGQKIWISAGEHDFADNIIHTVLARVEGAVPGIKGLSLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  EDGS    NG+    L++K+G   NAT  + + N  G+L+G+            
Sbjct: 231 PKFLVNEDGSLGERNGVSCAGLEHKMGIHGNATCVMAYENAKGWLIGEEGRGMN-----N 285

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQPV--------MK 356
           + + ++ A +      +++ +A + A         + R ++G    D P         ++
Sbjct: 286 MFVVMNEARLGTGLQGLAIGDAAYQAAVEFANDRLQGRSLTGPKNPDGPADPIMVHPDVR 345

Query: 357 RAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R + +    +         TAL   L  + DEA + ++   Y  ++ P+ K +       
Sbjct: 346 RMLLEAKAFVEGGRAFILWTALQADLQKAADEAVA-TKAKDYMGLITPVLKAYLTDKGFH 404

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           V + AM+  GGSGY E    +++ R++    I  G+     LD++ 
Sbjct: 405 VASLAMQVHGGSGYTEHFPASQYLRDARITMIYEGTNGIQALDLVG 450


>gi|322819443|gb|EFZ26564.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 411

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 43/275 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ + E+              IG + ++E   GTD+  +++  +K+ D  Y L+G K
Sbjct: 144 WLPKVLTGEH--------------IGAMCMSEPGAGTDVLGMSTAAKKLGDEKYVLNGCK 189

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D  ++ A+V+G++  F+V    E G+P   C  ++ +K G RS+   +L F
Sbjct: 190 TWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGTKI-DKCGMRSSQMCQLFF 244

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
            N       +L+ +    E+ K ++     L+   +++S M + +A+        YA  R
Sbjct: 245 DNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRCVELMTRYASER 298

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++R IA+   +  AA AL++ ++ S     +        R+ +   K 
Sbjct: 299 QAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-------RLGSDAAKL 351

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   +A  V    M+ +GG GY  E  + R +R++
Sbjct: 352 FAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDA 386


>gi|91788978|ref|YP_549930.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698203|gb|ABE45032.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 575

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 34/305 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++     DG + LSG K F+S    D       ++LA++ G     
Sbjct: 164 LTEPHAGSDLGLVRTKAMPQPDGSFLLSGTKIFISGGEHDLTDNIVHLVLARLHGPGIEA 223

Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  FLVP+ + DG+ + +  +R++ K+G   + T  + F +  G+++G+     
Sbjct: 224 PPGPKGLSLFLVPKFMPDGTRSPVHCERIEEKMGLHGSPTCVMRFDDATGWIVGEPGRGL 283

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSG--------GILIDQPVM 355
             +  M     L  A+  +  +  +  +A  YAR R    V G         ++   P +
Sbjct: 284 SAMFVMMNAARLHVALQGIGLLDAAWQKADAYARERRQMRVPGQRNSAEAADLIAGHPAI 343

Query: 356 KR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R      A  D    +A  T +   +A    +A  R     +  ++ P+ K      A 
Sbjct: 344 RRILDTQRAWIDGGRLLAYKTGIELDIARHHPDAARRGSAQRWCSLVTPVLKAALTSQAF 403

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQ 467
              ++ ++  GG GY++E  I +  R+S    I  G+     +D+L   +L  G +    
Sbjct: 404 HGASDCLQVFGGHGYVKEWGIEQIVRDSRVTMIYEGTNEVQAIDLLVRKVLPDGGSALAA 463

Query: 468 LFSTL 472
           L   L
Sbjct: 464 LLDEL 468


>gi|114770393|ref|ZP_01447931.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
 gi|114549230|gb|EAU52113.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
          Length = 592

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 189/442 (42%), Gaps = 83/442 (18%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P+  + + PK+    +  T             + LTE   GTD+ ++ S      D  Y 
Sbjct: 142 PQQKQTYLPKLIDGSWTGT-------------MNLTEPHAGTDLGSLKSTALSEGDH-YR 187

Query: 228 LSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271
           + G K +++     MS+  I  +LA++EG       +  F+VP+ L +     G  N + 
Sbjct: 188 IKGQKIYITYGEHDMSENIIHLVLARIEGAPAGIKGISLFIVPKFLVNSDGTLGVKNDVK 247

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMS 324
              +++K+G   + T  L+F       GFL+G     L++    + D +  + L    +S
Sbjct: 248 CLSIEHKLGINGSPTTVLQFGENEGAIGFLVGQENQGLSIMFAMMNDARFAVGLQG--LS 305

Query: 325 VSGMRVSLAEAIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +S    +  +A  YA  R          G  +   P + R +A +  +I A   ++   A
Sbjct: 306 ISNR--AFHQAKSYAAERIQGIPLERKEGDTIHHHPDVMRLLASMRSEIEAMRGITIYTA 363

Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + D AK+  +   +    + +M PI K W  + + ++ ++ ++  GG G+IEE   A+H
Sbjct: 364 AAIDLAKTNLDNNGFWSSRSELMIPIMKGWLTERSISITSDGIQVHGGMGFIEETGAAQH 423

Query: 434 YRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQ---------DLGSSGK 481
           YR++   +I  G+      D+L+   L ++  N+ E +   ++           L  S K
Sbjct: 424 YRDARILTIYEGTTAIQANDLLHRKILRDEAANILELINEIIKDAESVNQSYASLNFSSK 483

Query: 482 KVITI---LRDSISLCKEDKGLARFLTE---------------KIALASSAAALYRAGMN 523
           K++     +++ I    ++K L R L+                 + L S+ AA  +   +
Sbjct: 484 KLLEATYSVKECIQYILDNKELLRELSAISVPLLMMMGTLCGGWMTLRSADAAFKQKNSS 543

Query: 524 DIADVFLENRFLDN-CHSTHCM 544
           +  + FLE +   N  +++HC+
Sbjct: 544 NWNNDFLEAKLTYNRIYTSHCL 565


>gi|311696587|gb|ADP99460.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 689

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP+ +   A  + LTE + GTD+  + ++ +  +DG Y L+G K F+SS   D       
Sbjct: 235 APLTEGRWAGTMCLTEPQCGTDLGQVKTKAEPQADGSYRLTGTKIFISSGDHDLTENIVH 294

Query: 244 IMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           I+LA++    +G  G   F+VP+ L D     G  NG+    L+ K+G +++AT  L F 
Sbjct: 295 IVLARLPDAPKGTRGISLFIVPKFLPDSNGDVGERNGVVCGSLEKKMGIKASATCVLNFD 354

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI 348
              GFL+G  N     +        + +AI  V    +S   A+ YA+ R     +SG  
Sbjct: 355 GATGFLIGPENDGLNCMFTFMNTARIGTAIQGVGPAELSYQWALAYAKDRRSMRALSGKK 414

Query: 349 LIDQ---------PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR--- 394
             DQ          V +  +   A+       L +  RLA+   E  +  +E    +   
Sbjct: 415 EPDQVADSLIHHADVRRMLLTQKAIAEGGRAMLYYAARLADHMVEGFTEGDEKKADKYDD 474

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               + PI K +  ++        ++  GG GYI E  + +  R++   ++  G+     
Sbjct: 475 KLGFLTPILKGFLTELGCEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLYEGTTGIQA 534

Query: 452 LDVLN 456
           LD+L 
Sbjct: 535 LDLLG 539


>gi|300704734|ref|YP_003746337.1| butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum CFBP2957]
 gi|299072398|emb|CBJ43743.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           CFBP2957]
          Length = 594

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++     M+D  +  +LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNDNGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ + A  +A   A +    +  +E  +R +  A    + P+ K W  +M+  V 
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAEEDAARKQNEALYEFLVPVVKGWSTEMSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|56420132|ref|YP_147450.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56379974|dbj|BAD75882.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 380

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     +    + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYARQVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V G+   G  ++  L+      G   +   +K+G R++ T EL F N     +   NV  
Sbjct: 171 VTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +A
Sbjct: 228 DPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C        +A++  G
Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GY++E  + RH R+
Sbjct: 341 GYGYMKEYGVERHLRD 356


>gi|291513773|emb|CBK62983.1| Acyl-CoA dehydrogenases [Alistipes shahii WAL 8301]
          Length = 555

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 29/335 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSS 237
           F+ E       P         + LTE   G+D+ A+  +     +   + L+G K F+++
Sbjct: 133 FASEEIKQKYLPWVSAGATCAMDLTEPDAGSDLGAVMLKATWSEERQTWLLNGVKRFITN 192

Query: 238 PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              +  ++LA+ E G      +  L+ D    G+  +R++NK+G + + T EL F+N   
Sbjct: 193 GDGEVSLVLARTEEGTTDARGLSMLVYDKRDGGVKVRRIENKLGIKGSPTCELVFTNAPA 252

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351
            L+GD  +  G ++   ++  +++A + +    V L EA     + YA  R   G  +I 
Sbjct: 253 QLVGDRKM--GLIK--YVMSLMNAARLGIGAQSVGLCEAAYREGLKYAHEREQFGKPIIQ 308

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI-- 395
              +   ++++   +    AL +  A   +              EA+ R E   Y R+  
Sbjct: 309 FAAVSEMLSNMKAKVQGVRALLYETARFVEVYKQYGHISHERSLEAEERQEMKFYNRLAD 368

Query: 396 -MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              P+ K +  + A  +  +A++  GGSG++++    R YR++   +I  G+    V+  
Sbjct: 369 GFTPLVKLFSSEYANQLAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAA 428

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +N + KGT   EQ+     +    +   V+T L++
Sbjct: 429 INAVTKGT-FLEQIGRYAAESYTEAMCPVVTKLKE 462


>gi|238021517|ref|ZP_04601943.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147]
 gi|237868497|gb|EEP69503.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147]
          Length = 595

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 48/335 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + L+E   G+D+A + +Q     +G Y ++G K F++     +++  + L         A
Sbjct: 163 MNLSEPNAGSDLAHVATQAAPDGNGAYRITGQKIFITWGEQELTENIVHLVLARLPDAAA 222

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  F+VP+ L +     G+ N +    L++K+G  ++ T  ++F    G+L+G  
Sbjct: 223 GVQG-ISLFIVPKFLLNADGSLGARNAVHAVGLEHKLGIHASPTCTMQFDGATGYLVGRA 281

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMK 356
                 +  M     L+  I   +    +   A  YA  R V G I      +I  P ++
Sbjct: 282 GKGLAYMFTMMKAARLNVGIEGHAVAERAYQNARAYAAER-VQGAIDGRDVAIIAHPDVR 340

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +A     +AA  AL  R A  FD A+  ++  A  +         PI K W       
Sbjct: 341 RMLAVQKATLAAQRALYLRAAALFDLAEGLADNVARKQAERELDFFIPIIKAWLTDNGVL 400

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-------------LNL 457
           +   A++  GG+GY+EE  +A+  R+     I  G+      D+             L L
Sbjct: 401 LTNLAIQIYGGAGYVEESGVAQLMRDVRITPIYEGTNGIQAADLAGRKTTGNQGALPLKL 460

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           L +G  L + L  TL   L    ++ I +   S++
Sbjct: 461 LAEGKTLADALAPTLAHAL----RQAIALAEQSVA 491


>gi|320449278|ref|YP_004201374.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus
           SA-01]
 gi|320149447|gb|ADW20825.1| acyl-coa dehydrogenase, short-chain specific [Thermus scotoductus
           SA-01]
          Length = 372

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 35/258 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D A+I ++ +++  G + L+G K W  S+  +  ++++A+ E  +  FLV  
Sbjct: 123 LTEPQAGSDAASIRTEARRVPGG-FVLNGLKSWITSAGQAHLYVVMARGEKGISAFLV-- 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
             E  +P GL +   + K+G  +  T E+     F     LLG         E+ + L Y
Sbjct: 180 --EKDTP-GLSFGPPEAKMGLHAAHTAEVRLEGVFVPEENLLG---------EEGRGLAY 227

Query: 318 ----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LDS  + V+   V +A      A  YA  R   G  L +   +   IAD+ + IAA
Sbjct: 228 ALAGLDSGRVGVAAQAVGIARGAFEIAKAYADEREQFGRKLREHQAIAFKIADMHVKIAA 287

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL    A   D  +  + EA+ A++ A         +A  V  EA++ +GG GY  + 
Sbjct: 288 ARALVLEAARKKDSGERFTLEASTAKLFA-------SSVAVEVTREAVQVLGGYGYHRDY 340

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 341 RVERYYRDAKVTEIYEGT 358


>gi|146284170|ref|YP_001174323.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572375|gb|ABP81481.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 592

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251
           LTE   GTD+  I ++ +  +DG Y +SG K F++     ++D  I L       A    
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGS 225

Query: 252 R-VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           R +  FLVP++L  +DGS    N L    +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 RGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   +EAA  R      ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQRAEAQVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG G+I E    +  R+     I  G+     LD++   ++  G  ++
Sbjct: 406 GLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMY 465

Query: 466 EQLFSTLEQDLGSSG 480
           +     +   + S+G
Sbjct: 466 QAFVDEIRAFVASAG 480


>gi|113866842|ref|YP_725331.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113525618|emb|CAJ91963.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 594

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 153/327 (46%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKATFLPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAKNIVHLVLARTPTAPEGVKGISLFIV 230

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +   DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFMVNADGSTGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I ++SA  SV    ++++E     A+ +AR R  S  +         +I  P +K
Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVK 345

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A+ + A  +A   A +   A+   +   R +  A+   + P+ K W  +++  
Sbjct: 346 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRQQNQAFYEFLVPVVKGWSTELSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+HYR++
Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|91978757|ref|YP_571416.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91685213|gb|ABE41515.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 593

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 110/511 (21%), Positives = 217/511 (42%), Gaps = 79/511 (15%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHPAWHALLRRSIHDG 114
           LG+Y    TAQ L     + +  L      G++       +KV   P W    +R I  G
Sbjct: 29  LGDYDSEITAQVLEEAGKFASDILAPLNRIGDKHGIKLEHNKVTTAPGWPDAYQRWIAAG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +       F       A       ++  + +  G  + P +T +++ AL    +  +  
Sbjct: 89  WNAVSGPEQFGGQGLPSAVNAVCTEIWASSNMAFG--LCPLLTLSAIDALHAHGSDALKN 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T    MQ         LTE + G+D+ A+ ++ ++ +DG Y + G K
Sbjct: 147 IYLGKLVSGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYKIFGSK 193

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275
            F++     M+D  +           A  +G +  FL+P+ L +     G+ N +    +
Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLIPKFLVNADGSLGARNDIFPSGV 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  ++ T  +   +     G+L+G+ N     +  M     L  A+  V     + 
Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLGVALEGVGIADRAY 312

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLA 377
            +A+ YA+ R     I         +I  P +KR      A+   A  I  +TA++  +A
Sbjct: 313 QQALAYAQERKQGRAIGSTSTGSDPIIKHPDVKRTLLLMRALTGAARTICYSTAVALDVA 372

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ K +++ AA A ++ PI K +   +   V +  ++  GG G+IEE   A+HYR++
Sbjct: 373 ARSDDPKIKADAAARAALLTPIAKAFSTDIGTEVASFGVQIHGGMGFIEETGAAQHYRDA 432

Query: 438 PANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
               I  G+     +D++              LL++ + + + + ++ +   G++G +  
Sbjct: 433 RIAPIYEGTNGIQSIDLVTRKLGVNGGASVWALLDELSVIVKNVEASNDPAFGATGPR-- 490

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAA 515
             LRD++         +++L EK+  +++ A
Sbjct: 491 --LRDALDALTR---ASKYLLEKLGSSTNEA 516


>gi|11499826|ref|NP_071069.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304]
 gi|2648280|gb|AAB89011.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304]
          Length = 402

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 45/279 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K         TE + G+D+A I ++  K  D  Y ++G K F+++  ++D +I+LA+
Sbjct: 118 PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDE-YVINGTKMFITNGSIADYYIVLAR 176

Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +         +  FLV R +      G+   +LKNK+G R++ T E+ F N        
Sbjct: 177 TDPNPPKRHHGMSVFLVERDMP-----GVQANKLKNKLGIRASDTAEVVFKNV------- 224

Query: 302 LNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                 P E++         + +++ +   + V+   + LA+     A HYAR R V   
Sbjct: 225 ----RVPKENLIGQEGQGFYQTMMFFNITRIPVAFQALGLAQGAFELAYHYARNREVFER 280

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D  V +  +A +  ++ AA  L+++ A  F +     +       +  + KY+  K 
Sbjct: 281 KLADFQVTQEKLAKMRTELEAARLLAYQAA-YFQDKMGMPDPG-----LTAMAKYYTAKA 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A  ++ EA++  GG G++ E+ I+R YR+     I  G+
Sbjct: 335 AQFIVNEALQIHGGYGFMGEQHISRMYRDVRILEIYEGT 373


>gi|71656085|ref|XP_816595.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70881734|gb|EAN94744.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 411

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 43/275 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ + E+              IG + ++E   GTD+  +++  +K+ D  Y L+G K
Sbjct: 144 WLPKVLTGEH--------------IGAMCMSEPGAGTDVLGMSTAAKKLGDEKYVLNGCK 189

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D  ++ A+V+G++  F+V    E G+P   C  ++ +K G RS+   +L F
Sbjct: 190 TWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGAKI-DKCGMRSSQMCQLFF 244

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
            N       +L+ +    E+ K ++     L+   +++S M + +A+        YA  R
Sbjct: 245 DNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRCVELMTRYASER 298

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++R IA+   +  AA AL++ ++ S     +        R+ +   K 
Sbjct: 299 QAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-------RLGSDAAKL 351

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   +A  V    M+ +GG GY  E  + R +R++
Sbjct: 352 FAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDA 386


>gi|168183589|ref|ZP_02618253.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|182673284|gb|EDT85245.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
          Length = 377

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 27/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD+ I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDSIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG++N  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RA 358
            G +  MK L    +  A  ++   + ++ EA+ YA++R        ++P+ K       
Sbjct: 228 KGFITAMKTLSVGRIGVASQAIGIAQAAVDEAVKYAKQRK-----QFNRPIAKFQGIQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++ 
Sbjct: 283 LADMETKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAEAAIQIVNDALQI 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
            GG GYI++  I R YR+    +I  G+     + +  NLL+
Sbjct: 336 HGGYGYIKDYKIERLYRDVRVIAIYEGTSQVQQMVIASNLLK 377


>gi|92114549|ref|YP_574477.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797639|gb|ABE59778.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 603

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  I ++ Q   +  Y ++G K F+S+   D       ++LA++    EG 
Sbjct: 165 LTEPQCGTDLGLIKTRAQPDGEEGYRITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L D     G  N +    L++K+G   NAT  + F    GFL+G+ +  
Sbjct: 225 KGISLFVVPKYLPDAEGGIGERNAVSCGSLEHKMGIHGNATCVMNFDGARGFLVGEPHKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353
              +  M  +  +   I  +  M +S   A+ YAR     R +SG    D+P        
Sbjct: 285 LACMFTMMNVARIGVGIQGLGLMEISFQNALAYARERLQMRALSGTQNTDKPADPIIAHP 344

Query: 354 -VMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYARIMA---PITKYWCCKM 407
            V +  +   AL       + +  +LA++ + + S SE  +   ++    PI K +  ++
Sbjct: 345 DVRRMLLTQKALAEGGRMMVLYAAQLADTVECSASDSERESAETLLGLLTPIVKAFLTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                 E ++  GG GYI E  + ++ R++    +  G+     LD+L    L+ +G  L
Sbjct: 405 GFEATNEGVQVFGGHGYIREWGMEQYVRDARITRLYEGTTGIQALDLLGRKVLMSQGEAL 464


>gi|114569089|ref|YP_755769.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339551|gb|ABI64831.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 596

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 150/343 (43%), Gaps = 52/343 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   GTD+  + ++    +DG Y ++G K ++SS   D       ++LA++EG   
Sbjct: 164 MNLTEPHCGTDLGLLRTKAVPQADGSYKITGQKIWISSGEHDMAENIIHLVLARIEGAPE 223

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ + D     G+ N      L++K+G   NAT  +++    G+L+GD N
Sbjct: 224 GVKGISLFVVPKFIPDADGNPGTRNAAKCGGLEHKMGIHGNATCVMDYDEATGWLVGDEN 283

Query: 304 VSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGI--------- 348
                 + +KI+ I ++ A + V     +LAEA +     +A+ R     +         
Sbjct: 284 ------KGLKIMFIMMNEARLGVGLQGYALAEAAYQQSLGFAKDRLQGRSLTGPKNQDGP 337

Query: 349 ---LIDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPI 399
              +I  P ++R + D    + AA      TAL   L     +   R +   Y  ++ PI
Sbjct: 338 ADPIIVHPDVRRMLMDQKSFVEAARCFALWTALQGDLEEKASDPAMREKAGDYMALLTPI 397

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV----- 454
            K +       +++  ++  GGSG+ EE   ++  R++    I  G+     LD+     
Sbjct: 398 VKGYLTGKGYDMVSSGLQIHGGSGFTEEWGASQLLRDARITLIYEGTNGIQALDLVGRKL 457

Query: 455 -LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            +N +   T  F +L + + +      +  +  + D+ +  K+
Sbjct: 458 AMNGMRPITTFFAELDAFVAEGGNDETQPFVQAVADTKAKLKQ 500


>gi|296446824|ref|ZP_06888762.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296255699|gb|EFH02788.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 590

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 54/317 (17%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+A + ++ +++ DG Y L+G K F+
Sbjct: 150 PKMISGEWTAT-------------MNLTEPQAGSDLALLRTRAERVGDGSYRLTGQKIFI 196

Query: 236 SSPMSDA------FIMLAQVEGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D       F++    +   G      FL P+ L D     G  N L    ++ K+
Sbjct: 197 TYGEHDLSENILHFVLARLPDAPPGTRGISLFLAPKFLPDADGRPGERNDLRCAGVERKL 256

Query: 280 GNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
           G  +  T  + + +  G   FL+G+ N     +  M     +++A +SV    V+LAE  
Sbjct: 257 GIHAAPTCTMAYGDNGGARAFLVGEENAGLACMFTM-----MNNARLSVGLQGVALAERA 311

Query: 335 ---AIHYARRR---HVSGG----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              A+ YAR R      GG     ++  P + R +  +    AAA A+SF  A S D A+
Sbjct: 312 TQAALAYARERLQGRAPGGPDPSPIVAHPDVARMLLTMKAQTAAARAISFLTAASLDRAR 371

Query: 385 SRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +S EAA        ++ P+ K +   +     +  ++  GG G+IEE   A+  R++  
Sbjct: 372 RQSGEAAREAEERAGLLTPLAKAYSTDIGVETASLGVQVHGGMGFIEETGAAQLLRDARI 431

Query: 440 NSILLGSGNAMVLDVLN 456
             I  G+     +D++ 
Sbjct: 432 TPIYEGTNGIQAIDLVT 448


>gi|124265612|ref|YP_001019616.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
 gi|124258387|gb|ABM93381.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
          Length = 596

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 54/367 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  AL T  T    + + PK+ S  +  T             + LTE   GT
Sbjct: 128 MYPGLTHGAYEALHTHGTDEQKRTYLPKLTSGHWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + S+ +  +DG Y ++G K F+SS   D       ++LA++    +G  G   F+V
Sbjct: 175 DLGLLRSKAEPQADGSYRITGSKIFISSGEHDLAENIVHLVLARLPDAPQGSKGISLFVV 234

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    L++K+G   NAT ++      G L+G+ +     +  M 
Sbjct: 235 PKFLVQPDGSLGARNPIWCTGLEHKMGIHGNATAQISLDGAVGTLVGEPHKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355
               L   + S+    V+   A+ YA+ R     +SG    D+P              + 
Sbjct: 295 NAARLGVGMQSLGLTEVAYQNAVAYAKDRIQMRSLSGPKAPDKPADPIIVHPDVRKMLLT 354

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            RA A+    ++   AL      S  +   R + A    ++ PI K +    A    +  
Sbjct: 355 ARAYAEGGRALSLYCALLIDRELSHPDEAVRRDAADQVALLTPIVKAFLTDNAWLATSHC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG GYI E  + ++ R++  N I  G+     LD+L    L + G  L  F QL  
Sbjct: 415 LQVYGGHGYIREWGMEQYVRDARINMIYEGTNTIQSLDLLGRKVLADNGAKLKKFGQLIV 474

Query: 471 TLEQDLG 477
              ++ G
Sbjct: 475 DFVEEEG 481


>gi|271967603|ref|YP_003341799.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270510778|gb|ACZ89056.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM
           43021]
          Length = 386

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 39/282 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GR 252
           G+ LTE   GTD+  I  Q + + DG  Y ++G K W  ++  +D   +L +        
Sbjct: 121 GIALTEPAAGTDLQGI--QTRAVRDGDHYVINGTKTWITNARHADPMPVLVKTSVTEPAH 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308
            G  L+  L+E G+P G    R   K+G +   T E+        +L D+ V      G 
Sbjct: 179 RGMSLI--LVEAGTP-GYTVSRDLPKLGYKGTETCEI--------VLEDVRVPASRLLGG 227

Query: 309 VED---MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           VE     + L  L+   ++++   V +++     A++Y+R RH  G  + D   ++  +A
Sbjct: 228 VEGRGMQQALSALELGRVNIAARAVGISQCAYDAALNYSRERHAFGHPIADFQAIQLKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A DI AA  L++  A   +     SE        A + KY+  ++A  V  EAM   G
Sbjct: 288 DMATDIQAARLLTYWAATRSESGAVNSE--------AAMAKYFASEVALRVTMEAMRIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           G GY +E  I R YR++P  +I  G+ +   + +   L  GT
Sbjct: 340 GYGYSQEFVIERLYRDAPLMAIGEGTNDVQRMVIARSLISGT 381


>gi|257095856|ref|YP_003169497.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048380|gb|ACV37568.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 378

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 30/285 (10%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   P+ +  +     LTE   G+D AAI+++  +  D  + L+G K F++
Sbjct: 98  KYGTDEQKETWLKPLARGEMLGCFCLTEPHTGSDAAAISTRADRDGDH-FVLNGVKQFIT 156

Query: 237 S----PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +     ++  F +  +  G+ G  CFLVP      +  G    R++ K+G  ++ T ++ 
Sbjct: 157 TGKYAQVAIVFAVTDKAAGKKGISCFLVPT-----TTPGYIVARIEEKMGQHASDTAQIL 211

Query: 291 FSNT---FGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           F +       LLG       ++   +E  +I I    A  SV   R +   A+ YA+ R 
Sbjct: 212 FEDCRIPASCLLGREGDGYRIALSNLEAGRIGI----AAQSVGMARAAFDAAVQYAKERV 267

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +I+   +    AD+A  I AA  + +R A   D  K   +EA+ A++ A      
Sbjct: 268 TFGKPIIEHQAVSFRFADMATQIDAARLMVWRAATFKDAGKPCLKEASMAKMFAS----- 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             +MA  V ++A++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 323 --EMAEKVCSDAIQILGGYGYVSDFPVERIYRDVRVCQIYEGAND 365


>gi|159043391|ref|YP_001532185.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911151|gb|ABV92584.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 592

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 49/360 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE + GTD+  I ++ +   DG Y ++G K ++S+    MS+  I  +LA++ G   
Sbjct: 161 MNLTEPQCGTDLGLIRTKAEPQEDGSYAITGQKIWISAGEHDMSENIIHLVLAKIPGGPE 220

Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ L  +DGS    N +    L++K+G   NAT  + +    GFL+G+++
Sbjct: 221 GVKGISLFIVPKFLVNDDGSLGARNAVSCGGLEHKMGIHGNATCVMNYDGATGFLVGEMH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351
                +  M     L  A+   +   ++   A+ +AR     R ++G          +I 
Sbjct: 281 KGLRAMFTMMNEARLSVALQGYAQGDIAYQNALGFARDRLQGRDITGAQAPNKPADPIIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAP 409
            P ++R + D    +  A AL F  A   D+A     +E  A   ++ P+ K +      
Sbjct: 341 HPDVRRNLMDQKSFVEGARALVFWGATLIDQAHRCKDAEADAMISLLIPVMKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
                A + +GGSG+  E  + +  R++    I  G+     LD++              
Sbjct: 401 ETTVLAQQTLGGSGFTREWGLEQFVRDARIAMIYEGTNGIQSLDLVG------------- 447

Query: 470 STLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIAD 527
               + LG +G K +    D + +  KE++  A   +  +  L +++  L  AGM  ++D
Sbjct: 448 ----RKLGLNGGKTVMAFFDMVKTFLKENEDNAELKSGFLDPLKAASKDLQAAGMYFMSD 503


>gi|218779149|ref|YP_002430467.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760533|gb|ACL02999.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 43/295 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252
           + LTE + G+ ++ IT+      +G Y + GHK F+S    DA      +MLA+++G   
Sbjct: 162 MALTEPQAGSSLSDITTTAYPTDEGYYKIRGHKIFISGGDHDALDNIVHLMLARIDGAPA 221

Query: 253 ----VGCFLVP--RLLEDGSP--NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGD 301
               +  F+VP  R+  DGS   N +    + +K+G +     EL   E ++  G+L+G+
Sbjct: 222 GTKGISLFVVPKKRVEPDGSLVFNDIVCSSVYHKLGYKGMPLTELSIGEKNDCRGYLIGE 281

Query: 302 ----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---- 353
               L      + + +I + L +A ++ +    SL     YAR R     I    P    
Sbjct: 282 PHKGLKCMFQMMNEARIEVGLGAAGIATAAYYASL----EYARDRPQGRKITEKDPTQPQ 337

Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                        +++R+I + +L +     + + LA   D  + + +      I+ PI 
Sbjct: 338 TPIINHADVKRMLLLQRSIVEGSLSLLTQCGMYYDLALVADNEEDKEKYHLLLEILTPIA 397

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           K +  +M    ++  ++C GG GY ++  + ++YR+   + I  G+     +D+L
Sbjct: 398 KSFPSEMGVLSVSNGLQCFGGYGYCDDFPLEQYYRDIRIHPIHEGATGIQAMDLL 452


>gi|188582682|ref|YP_001926127.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179346180|gb|ACB81592.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 596

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 145/339 (42%), Gaps = 45/339 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M P +T  ++ AL+    VH   A K     Y P     M + +    + LTE   GTD+
Sbjct: 126 MYPGLTQGAIAALL----VHGSEAQKA---TYLPK----MVEGAWTGTMNLTEPHCGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260
             + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+
Sbjct: 175 GLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPK 234

Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L  EDGS    N +    L++K+G   NAT  + +    G+L+G  N     +  M   
Sbjct: 235 FLVNEDGSLGDRNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGQENRGLAAMFVMMNE 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIADI- 362
             L   +  +     +   A+ YAR R     ++G    D+        P ++R +  I 
Sbjct: 295 ARLAVGVQGLGQSEAAYQNAVAYARERLQGRALTGAKAPDKAADPIIVHPDVRRTLMQIR 354

Query: 363 ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A + AA      TAL+  +A+   +A  R        +M P+ K        A   EA +
Sbjct: 355 AFNEAARALILWTALNSDIAHRSPDAGQRQAADDMLGLMTPVVKGVLTDRGFANAVEAQQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+EE  +++  R++    I  G+     +D++ 
Sbjct: 415 MFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG 453


>gi|313676498|ref|YP_004054494.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312943196|gb|ADR22386.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 379

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 51/292 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY-CLS 229
           K W PK+ + E+              +G  GLTE   G+D   + +    + DG Y  ++
Sbjct: 108 KRWLPKLATAEW--------------LGAWGLTEPNTGSDAGNMKTTA--VQDGDYWVIN 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           G K +++  +S    ++    G +G    +   ++E+G+  G    R +NK+G R + T 
Sbjct: 152 GAKNWITHGISRDIAVVIVRTGEIGDSHGMTAFVIENGT-EGFKGGRKENKLGMRLSETA 210

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
           E+ F +       +LG  NV  G ++ MK+L   D   +S++ + + +AE     A+ Y+
Sbjct: 211 EMIFEDCRVHKDNILG--NVGEGFIQAMKVL---DGGRISIAALSLGIAEGAYEAALAYS 265

Query: 340 RRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           + RH       +QP+     +   +AD+A ++  A  L+F+ A+  +  KS ++E+A A 
Sbjct: 266 KERH-----QFNQPISSFQGIAFKLADMATELEGAKLLTFQAADLKNNGKSVTKESAMA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 KY+  ++A     EA++  GG GY ++  + ++YR+S   +I  G+
Sbjct: 320 ------KYYASEVAVKNSVEAVQIFGGYGYTKDYPVEKYYRDSKLCTIGEGT 365


>gi|196248594|ref|ZP_03147295.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196212319|gb|EDY07077.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 382

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 125/303 (41%), Gaps = 43/303 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK  S E             +   + +TE   G+D+A I++   K 
Sbjct: 99  IASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAGSDLANISTTAVKD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270
            D  Y ++G K F+++ +    I++A       C   P            ++E  +P G 
Sbjct: 146 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPHAKPPHRGISLLVVERDTP-GF 196

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  +  T EL F +       LLG+       + +      L  AI + + 
Sbjct: 197 TRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
             V  +   HY ++R   G  + +   ++  +A++A DIA       R+       K   
Sbjct: 257 AEVMFSLVKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIV 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E + A       K+W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I  G+ 
Sbjct: 317 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 369

Query: 448 NAM 450
             M
Sbjct: 370 EMM 372


>gi|260460334|ref|ZP_05808586.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033979|gb|EEW35238.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 589

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 184/439 (41%), Gaps = 60/439 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+  G   G    D  V   P W  L RR I  G + 
Sbjct: 31  LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLKDASVITPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                ++          + A  ++  A +  G  + P++T  ++ AL    +  +   + 
Sbjct: 91  LSGPEAYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASEDLKAKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F+
Sbjct: 149 EKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFI 195

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278
           +      +D  I L         A   G +  FLVP+ L  +DGS    N +    L++K
Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFLVGDDGSLGARNDVFCSGLEHK 254

Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G  ++ T  + + + F        G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHASPTCTMIYGDGFQGAKPGAIGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEA 314

Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA  R       +   G+  ++  P ++R +  +      A A+S+  A++ D
Sbjct: 315 ATQKAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374

Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A+ S  +EAA+    A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR+
Sbjct: 375 MARVSSGDEAAHWRDRANLLTPLAKAFSTDVGVEVASLGLQVHGGMGFIEETGAAALYRD 434

Query: 437 SPANSILLGSGNAMVLDVL 455
           +    I  G+     +D++
Sbjct: 435 ARIAPIYEGTNGIQAIDLV 453


>gi|219847033|ref|YP_002461466.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541292|gb|ACL23030.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 394

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 16/243 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           LTE   G+D A I +  +++ DG Y L+G K W  ++  +D  ++ A+ E  GR+G FLV
Sbjct: 137 LTEPYVGSDAAHIRTTAKRV-DGGYLLNGEKRWIGNATFADVIVVWAKDEETGRIGGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316
               E G+P G    +++ KI  RS    +++ +N F      L ++    +   IL   
Sbjct: 196 ----EKGTP-GYQATKIEGKIAKRSVINADIKLNNVFVPEANRLPLARSFRDTANILKNT 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  +V   + +   A+ Y  +R   G  +    ++++ +  +  D+ A   +++RL
Sbjct: 251 RYGVAWEAVGHAQAAYELALDYTLQREQFGRPIAGFQLVQQKLVQMLGDLTAIQLMAWRL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +   DE +++  E      MA + K +C   A  ++A   E +GG+G + +R IARH+ +
Sbjct: 311 SKLRDEDENQITEG-----MASLAKQYCAGKARQIVALGREVLGGNGILLDRHIARHFAD 365

Query: 437 SPA 439
             A
Sbjct: 366 IEA 368


>gi|50552918|ref|XP_503869.1| YALI0E12573p [Yarrowia lipolytica]
 gi|49649738|emb|CAG79462.1| YALI0E12573p [Yarrowia lipolytica]
          Length = 417

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           ++L TTP   + + P + + +               IG L ++E   G+D+ ++ +  +K
Sbjct: 133 LSLHTTPEQGEKYLPDLIAGK--------------KIGALAMSEAGAGSDVVSMKTTAKK 178

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + DG Y L+G K W  + P +D  ++ A+ +   G   +   + +   +G    R  +K+
Sbjct: 179 V-DGGYVLNGTKMWITNGPDADYMVVYAKTDPAAGARGITAFIVEKGMDGFSCARKLDKL 237

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLA 333
           G R + T EL F + F   G +LG +N   G V  +   + L+  +++   +  M  +L 
Sbjct: 238 GMRGSNTGELIFEDVFVPEGNVLGKIN---GGVYVLMSGLDLERLVLAAGPIGLMHRALD 294

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           EA+ Y   R   G  +    +++  +AD+    A+  A  ++ A + D  +  S+E A  
Sbjct: 295 EALPYVHTRTQFGKPIAHNQLLQGKLADMYTAFASTRAFQYQTAKAADLGQHTSKECASV 354

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++A        + A  V  +A++C+GG GY+ E    R  R++    I  G+G + V  
Sbjct: 355 ILLA-------AEQATQVALDAIQCMGGMGYMMETVPQRLLRDAKLYEI--GAGTSEVRR 405

Query: 454 VL 455
           +L
Sbjct: 406 ML 407


>gi|330826395|ref|YP_004389698.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311767|gb|AEB86182.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 599

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 45/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   G+D+A I S+ +  +DG Y + G K F++     M+D  + L         A
Sbjct: 162 MNLTEPNAGSDLALIRSRAEPQADGSYRVFGQKIFITYGDHDMTDNIVHLVLARLPDAPA 221

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V G +  FLVP+ L +     G+ N      +++K+G  ++ T  L F +     G+LL
Sbjct: 222 GVRG-ISLFLVPKFLVNADGSLGARNDAHCVSIEHKLGIHASPTCVLAFGDNGGAVGYLL 280

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGIL 349
           G+ N     +E M   I ++ A + V    ++LAE     A+ YAR R      V+G  L
Sbjct: 281 GEANRG---LEYM--FIMMNEARLGVGLQGIALAERAYQQALAYARERKQGRDAVTGEAL 335

Query: 350 ID---QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400
           +     P ++R +  +   + A  A+++  A   D      +A  +  +   A  M PI 
Sbjct: 336 VTIDRHPDVRRMLMLMKSRVEACRAVAYYTAGLLDRAHAGADAGQKQRDLFLAEFMIPIV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K    +M   V +  ++  GG G+IEE   A+H+R++   +I  G+
Sbjct: 396 KGGSTEMGIDVTSLGIQVHGGMGFIEETGAAQHWRDARITTIYEGT 441


>gi|121603373|ref|YP_980702.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592342|gb|ABM35781.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 376

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 34/288 (11%)

Query: 178 IFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           I  R  +P  K     P+ +  +     LTE   G+D +++ +   K  DG Y LSG K 
Sbjct: 95  ILMRYGNPAQKKQWLMPLAQGDLLGAFCLTEPHTGSDASSLRTTAVKDGDG-YVLSGVKQ 153

Query: 234 FLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           F++S  +    ++  V     G+ G   F+VP         G    RL++K+G  S+ T 
Sbjct: 154 FITSGQNGQVAIVIAVTDKGAGKKGMSAFIVPT-----DAPGYSASRLEDKLGQHSSDTA 208

Query: 288 ELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++ F N         G       ++ G +E  +I I   S  M+ S   V++A    YA+
Sbjct: 209 QVNFDNCRIPAENLIGAEGEGYKIALGGLEGGRIGIAAQSVGMARSAFEVAVA----YAK 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +   +   +AD A  + AA  L +  A+  D  +   +EAA A++ A   
Sbjct: 265 ERQSFGSAIFNHQAVGFRLADCATQLEAARQLIWHAASLRDAGRPCLKEAAMAKLFAS-- 322

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +MA  V + A++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 323 -----EMAEKVCSAAIQTLGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|94971873|ref|YP_593913.1| acyl-CoA dehydrogenase-like [Deinococcus geothermalis DSM 11300]
 gi|94553924|gb|ABF43839.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 598

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 37/317 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + L+E   G+ +A IT+      DG Y ++G K ++S+    +S+  I  +LA+++G   
Sbjct: 161 MALSEPHAGSGLADITTTATPRGDGTYSITGTKMWISAGEHELSENIIHLVLARIKGAPA 220

Query: 253 ----VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VPR  +  DGS    N +    L +K+G R      L F     T G L+G
Sbjct: 221 GVKGISLFIVPRYRVNADGSLGESNNVVLAGLNHKMGYRGTTNTLLNFGEGGETIGELIG 280

Query: 301 DLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-- 354
           +     G +  M    +I + + + ++  +G   SL  A    + RH S      +PV  
Sbjct: 281 EPGRGLGYMFHMMNSARIGVGMGAVMLGYAGYLASLEYARERRQGRHASNKDPESEPVRI 340

Query: 355 -----MKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEEAAYARIMAPITKYWC 404
                ++R +      +    AL    A+  DE     A+ R +      ++ PI K W 
Sbjct: 341 IEHADVRRLLLRQKSIVEGGLALGLYAAHLEDEIETGPAEEREDNVLLLDLLTPIVKSWP 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
            + +   +++A++ +GG+GY  +  +  +YR++  N I  G+      D+L   + + G 
Sbjct: 401 SRYSQEALSDAIQVMGGAGYTRDYPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKVTQAGG 460

Query: 463 NLFEQLFSTLEQDLGSS 479
                L   ++ DL +S
Sbjct: 461 RGLHVLLERIQTDLQAS 477


>gi|282882090|ref|ZP_06290731.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
 gi|281298120|gb|EFA90575.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
          Length = 642

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T    ++    Y L+G K F++ +P +D +++ A 
Sbjct: 112 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAV 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G  +    +K+G RS++T EL F+      +   N+    
Sbjct: 171 TTPGIGTHGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELTFNKV---KVPKENLLGQE 227

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  +I +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   IAD+
Sbjct: 228 GQGFRIAMQTLDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADM 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I AA  + +  A      +  S EAA A+  A  T  +C         EA++  GGS
Sbjct: 288 ATKIRAARLMIYSAAEMKTNHEKYSMEAAMAKTYASETALFCAN-------EALQIHGGS 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY++   + R YR++   +I  G+     + V N
Sbjct: 341 GYMKGMEVERFYRDAKITTIYEGTSEVQRVVVAN 374


>gi|119505099|ref|ZP_01627175.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459081|gb|EAW40180.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 587

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 38/327 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----- 249
           + LTE   G+D+  + ++ ++  D  Y + G K +++    DA      ++LA++     
Sbjct: 163 MNLTESGAGSDLGPVKTRAERDGD-RYRIFGQKIYITWGDHDATDNIVHLVLARLPDAPA 221

Query: 250 -EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L +     G  N       ++K+G   + T  + + +     G+L+G
Sbjct: 222 GSKGISLFIVPKYLVNADGSLGERNDAFPVSTEHKLGIHGSPTCVMAYGDKDGAIGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           + N     +  M     L   +  V     +  +A+ YAR R   G  +I+   +KR + 
Sbjct: 282 EENNGLACMFTMMNEARLKVGLQGVGASEGAYQKAVAYARERVQGGVAIIEHADVKRMLM 341

Query: 361 DIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +   I A  AL++  A + D     EA  +SE+     +M P+ K WC ++   + +  
Sbjct: 342 TMRALIEAMRALAYNEAVTMDLAHYAEADVKSEQRQRIDLMIPVIKGWCTEIGVELTSLG 401

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG-----------T 462
           ++  GG G+IEE   A++ R+     I  G+      D++N  L   G            
Sbjct: 402 VQVHGGMGFIEETGAAQYLRDVRITPIYEGTNGIQAADLVNRKLARDGGSGMEAMQTQIA 461

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRD 489
            L +QL  +   +LG+ GK + + L D
Sbjct: 462 ELTQQLLQSSHPELGALGKSLASALAD 488


>gi|254293297|ref|YP_003059320.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041828|gb|ACT58623.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 593

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 49/350 (14%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +M+       M P +T  +  A++   +    + + PK+ S E+  T             
Sbjct: 116 MMSSANMAFAMYPGLTHGAYSAIVAGGSQEQKETYVPKMVSGEWSGT------------- 162

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  + ++    +DG Y ++G K ++S   +D       ++LA++EG   
Sbjct: 163 MNLTEPHCGTDLGLMKTKAAPQADGTYKITGQKIWISGGENDFTDNIIHLVLAKIEGAPE 222

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               V  F+VP+ +  E+G+P   N      L+ K+G   NAT  + +    G+L+G+ N
Sbjct: 223 GIKGVSLFIVPKFILDENGNPGERNACGCGGLEEKMGIHGNATCVMNYDGATGYLVGEPN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351
                +  M     L   +  ++   +S   A+ +A+ R     VSG          +I 
Sbjct: 283 KGMRTMFVMMNAARLGVGMQGLAQSEISYQNAVDFAKDRIQGRSVSGVKAPEKAADPVIV 342

Query: 352 QPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P ++R + D       A   +  T+L   L +  ++  +R +   Y  ++ P+ K +  
Sbjct: 343 HPDVRRMLMDQKAFNEGARAFSLWTSLQNDLEHRAEDEATREKAGDYMGLLTPVIKAFLT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   +AM+  GGSG+  E  + +  R+     I  G+     LD++
Sbjct: 403 DKGLKGCIDAMQIHGGSGFTREWGMEQFVRDCRIALIYEGTNGVQALDLV 452


>gi|261419842|ref|YP_003253524.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297530200|ref|YP_003671475.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319766656|ref|YP_004132157.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376299|gb|ACX79042.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297253452|gb|ADI26898.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317111522|gb|ADU94014.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 380

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     +    + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYARQVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V G+   G  ++  L+      G   +   +K+G R++ T EL F N     +   NV  
Sbjct: 171 VTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +A
Sbjct: 228 DPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C        +A++  G
Sbjct: 288 DMAMEIELARNMVYKAAWLKDKGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GY++E  + RH R+
Sbjct: 341 GYGYMKEYGVERHLRD 356


>gi|209516716|ref|ZP_03265568.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209502833|gb|EEA02837.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 606

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 164/422 (38%), Gaps = 65/422 (15%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVR 129
           +E+    N    +  A+   G+      F  AW A      H   L   +      PV+ 
Sbjct: 50  EEVLHPINQKADEAGAHFADGQVTTPAGFKAAWDAYREAGWHSLSLASELGGGGLPPVMS 109

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               ++RAA  +  +    G   SP+   A M+  +    V     PK+ S E+  T   
Sbjct: 110 VPISEMRAATGHSFSMY--GSFCSPA---AYMLGTLAPDWVKTHVVPKLASGEWTAT--- 161

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + +TE + GTD+  IT++     DG + ++G+K F+S    D       I
Sbjct: 162 ----------MSMTEPQAGTDLRQITTRAVPQEDGTWLITGNKIFISGGDHDLTDNIVHI 211

Query: 245 MLAQV---EGR-------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE 288
           +LA+    EGR       V  FLV +   D      G  NG+  + +++K+G  ++AT  
Sbjct: 212 VLAKAVDEEGRVPQSLSAVNVFLVSKQNIDPQTGVLGDRNGVHVRSIEHKMGIEASATCA 271

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYL------DSAIMSVSGMRVSLAEAIHYARRR 342
           L+F N  G+ +       G   +M  +  L       +A+  +    ++L  A+ YAR R
Sbjct: 272 LDFENAVGYRIASTE-GKGTTANMAPMFRLMNYARVGTAVSGIGYAEIALQNAVEYARER 330

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                             +I  P ++R + + +     A A + + A    EA+  SE A
Sbjct: 331 RSGRAASSSRDTKTVADPIIAHPDVRRLLLESSAFAEGARAGAMKAAVLQSEARYLSERA 390

Query: 391 AYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           A  +      ++ P+ K +             +  GG GY+++  I R  R S    I  
Sbjct: 391 ARQKAADILDLLTPVMKAFFTDRGFETTVACQQVFGGHGYVKDYGIERLVRNSRITQIYE 450

Query: 445 GS 446
           G+
Sbjct: 451 GA 452


>gi|78065649|ref|YP_368418.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77966394|gb|ABB07774.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 596

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    +  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|13476195|ref|NP_107765.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14026955|dbj|BAB53551.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 589

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 60/440 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWDK-VEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+  G   G    D  V   P W  L RR I  G + 
Sbjct: 31  LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLRDAAVTMPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                 +          + A  ++  A +  G  + P++T  ++ AL    +  +   + 
Sbjct: 91  LSGPEDYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASEALKAKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F+
Sbjct: 149 AKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFI 195

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278
           +      +D  I L         A   G +  FLVP+    +DGS    N +    L++K
Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFFVNDDGSLGARNDVFCSGLEHK 254

Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G  ++ T  + + + F        G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHASPTCTMIYGDGFRGATPGAIGWLIGEENKGLACMFTMMNNARLAVGMQGVAVAEA 314

Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA  R       +   G+  ++  P ++R +  +      A A+S+  A++ D
Sbjct: 315 ATQKAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374

Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A+ S  ++AA+    A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR+
Sbjct: 375 MARVSDGDQAAHWRDRANLLTPLAKAFSTDVGVEVASLGVQVHGGMGFIEETGAAAFYRD 434

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +    I  G+     +D++ 
Sbjct: 435 ARIAPIYEGTNGIQAIDLVT 454


>gi|121606175|ref|YP_983504.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595144|gb|ABM38583.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 593

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 63/372 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+   +  + + +A K+ S E+  T             + LTE + G+
Sbjct: 124 LCPMLTDGAIEALLVAGSDELKRKFAAKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+AA+ S+ +   DG Y + G K F++    D       ++LA+V G       +  F+V
Sbjct: 171 DLAAVRSRAEPQEDGTYKVFGTKIFITYGEHDMTGNIVHLVLARVPGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N      +++K+G +++ T  L+F +     G+L+G  N     +E
Sbjct: 231 PKFMVNDDGSLGERNDAWCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGQENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI--------LIDQPVMKR 357
            M   I +++A  +V    +++A     +A+ +A  R  S  +        +I+ P +KR
Sbjct: 288 YM--FIMMNAARFAVGMQGIAIADRAYQQAVRFAHDRAQSRDLAGSAGPVAIINHPDVKR 345

Query: 358 AIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +  +   +  A AL++  A + D A       +R +  A    + P+ K +  +M+  +
Sbjct: 346 MLLTMRAHVEGARALAYVAAAASDMAHHAADDATRIQNQAVYEYLVPVVKGFSTEMSIDM 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG--TNLFE 466
            +  ++  GG GYIEE   A+HYR++   +I  G+      D++    L +KG       
Sbjct: 406 ASLGVQVHGGMGYIEETGAAQHYRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALC 465

Query: 467 QLFSTLEQDLGS 478
              +T EQDL +
Sbjct: 466 DRIATTEQDLAA 477


>gi|116250362|ref|YP_766200.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255010|emb|CAK06084.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 598

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 45/340 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +M P +T  ++ AL+    VH        S E   T    M   + +  + LTE   GTD
Sbjct: 125 MMYPGLTQGAIAALL----VHG-------SDEQKATYLPKMVDGTWSGTMNLTEPHCGTD 173

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP 259
           +  + ++    +DG Y +SG K F+S+    ++D  I  +LA++EG       +  F+VP
Sbjct: 174 LGMLRTKAVPQADGSYKISGQKIFISAGEHDLTDNIIHLVLARIEGAPDGTKGISLFIVP 233

Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + L  +DG+P   N +    +++K+G  +NAT  + +    GFL+G  N     +  M  
Sbjct: 234 KFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMFVMMN 293

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADI 362
              L   +  ++   ++   A  YAR     R +SG          +I  P ++R +  I
Sbjct: 294 EARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTI 353

Query: 363 -ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            A + A       TAL   +A+   + K R        ++ PI K             A 
Sbjct: 354 RAFNEAGRAFLLWTALKSDIAHRAADEKERQTADDILGLVTPILKGVMTDKGFDHAVMAQ 413

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 414 QVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453


>gi|319784729|ref|YP_004144205.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317170617|gb|ADV14155.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 589

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 184/439 (41%), Gaps = 60/439 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWDK-VEFHPAWHALLRRSIHDGLHC 117
           LG+ ++     E  R A      L+  G   G    D  V   P W  L RR I  G + 
Sbjct: 31  LGDDLVDAVLGEAGRFATEEVAPLYTIGDRQGAALKDAAVTTPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                 +          + A  ++  A +  G  + P++T  ++ AL    +  +   + 
Sbjct: 91  LSGPEEYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASTDLKAKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D+AA+ ++ + + DG Y + G K F+
Sbjct: 149 EKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPVGDGSYRIFGQKIFI 195

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--ED---GSPNGLCYQRLKNK 278
           +      +D  I L         A   G +  FLVP+ L  +D   G+ N +    L++K
Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFLVGDDGALGARNDVFCSGLEHK 254

Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G  ++ T  + + + F        G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHASPTCTMIYGDGFQGTKPGAVGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEA 314

Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA  R       +   G+  ++  P ++R +  +      A A+S+  A++ D
Sbjct: 315 ATQKAIAYANERRQGKAASYTGTGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374

Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A+ S  +EAA+    A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR+
Sbjct: 375 MARVSAGDEAAHWRDRANLLTPLAKAFSTDIGVEVASLGLQVHGGMGFIEETGAAAFYRD 434

Query: 437 SPANSILLGSGNAMVLDVL 455
           +    I  G+     +D++
Sbjct: 435 ARIAPIYEGTNGIQAIDLV 453


>gi|169628281|ref|YP_001701930.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169240248|emb|CAM61276.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 382

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 160/380 (42%), Gaps = 50/380 (13%)

Query: 111 IHDGLHCSIWDR-SFEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSAS 160
           IH   H   WDR  + PV +  +A  +    +Y+        + +L+A  +     T  S
Sbjct: 21  IHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGCS 80

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219
            V+   +      W    F  E       P   T   IG   LTE   G+D AA+ +   
Sbjct: 81  AVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGAYCLTEPECGSDAAALRTSAI 140

Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQR 274
           +  D  Y L+G K F+S +  +D ++++A+  G     +   +VP+    G+P GL +  
Sbjct: 141 RQGDE-YVLNGVKQFISGAGAADLYVVMARTGGPGPRGISTIVVPK----GTP-GLSFGA 194

Query: 275 LKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            + K+G  +  T ++ F +              GF +    ++ G          L+ A 
Sbjct: 195 PERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGG---------RLNIAS 245

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G R +L + I Y R R   G  LI    ++  +AD+A ++ AA  + +R A +  E
Sbjct: 246 CSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVTE 305

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R+ E      +  + K     +   V  EA++  GG GY+ E  I +  R+   + I
Sbjct: 306 GDPRAAE------LCAMAKRIATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQI 359

Query: 443 LLGSGNAM-VLDVLNLLEKG 461
           L G+   M V+    L+E+G
Sbjct: 360 LEGTNEIMRVIVSRKLIEQG 379


>gi|121533413|ref|ZP_01665241.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307972|gb|EAX48886.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD A  + Q   + DG  Y L+G K F+++   ++ +++ A
Sbjct: 113 PLIKGKKLGAFGLTEPNAGTDAA--SQQTTAVLDGDHYVLNGSKIFITNGGEAEIYVVFA 170

Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             +   G   +   +LE G P G  + + ++K+G R++ T+EL F +     +   N+  
Sbjct: 171 MTDKTKGVKGISAFILEKGMP-GFTFGKKEHKMGIRASQTMELIFQDV---KVPKENLLG 226

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
              E  KI +  LD   + ++   + +A+A     + YA+ R   G  +     +   +A
Sbjct: 227 KEGEGFKIAMSTLDGGRIGIAAQALGIAQAALDHAVKYAKERVQFGKPIASNQAIAFMLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I AA  L++R A + D+ +  S+EA+ A++       +   +A  V  +A++  G
Sbjct: 287 DMATEIDAARLLTYRAAYAKDQGRPFSKEASMAKM-------YASDVAMRVTTDAVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E  + R  R +    I  G+
Sbjct: 340 GYGYTREYPVERLMRNAKITQIYEGT 365


>gi|258648036|ref|ZP_05735505.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC
           51259]
 gi|260851889|gb|EEX71758.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC
           51259]
          Length = 575

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 33/318 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSS 237
           F  E   +   P       + + LTE   G+D+  +  +      DG + L+G K F+++
Sbjct: 152 FGNEDQHSRFIPRVCEGATMSMDLTEPDAGSDLQRVMLKATYSEKDGCWLLNGVKRFITN 211

Query: 238 PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +D  ++LA+ E G      +   + D    G+  +R++NK+G   + T EL + N   
Sbjct: 212 GDADIHLVLARSEEGTTDGRGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAHA 271

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILID 351
            L GD  +  G ++   ++  ++ A + ++   V +++A +     YA  R   G  +I+
Sbjct: 272 ELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGISQAAYNEGLAYAADRQQFGKPIIE 327

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI-- 395
            P +   +A +   + A  AL ++ +   D              EA  R E+  YA++  
Sbjct: 328 FPAVYDMLALMKAKLDAGRALLYQCSRYVDLYKALEDISRERKLEADERKEQKEYAKLAD 387

Query: 396 -MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + P+ K    + A     ++++  GGSG++ +  I R YR++   SI  G+    V+  
Sbjct: 388 SLTPLAKGINSEYANQNTYDSIQIHGGSGFMLDYPIQRFYRDARITSIYEGTTQLQVVAA 447

Query: 455 LNLLEKGTNL-----FEQ 467
           +  +  G+ L     FEQ
Sbjct: 448 IRYVTNGSYLKQMRDFEQ 465


>gi|170740607|ref|YP_001769262.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194881|gb|ACA16828.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 592

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 30/286 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D++ + ++ +   DG Y + G K +++     ++D  I L         A
Sbjct: 161 MNLTEPQAGSDLSGLRTKAEPAGDGTYRIRGEKIYITWGEHDLTDNIIHLVLARLPDAPA 220

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNV 304
              G +  FLVP++L DG  N L    L++K+G   + T  +   E     G+L+G+ N 
Sbjct: 221 GTRG-ISLFLVPKVLPDGRRNDLRCAGLEHKLGIHGSPTCTMVYGEGEGAVGWLVGEANR 279

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSGGI-----LIDQPVMK 356
               +  M     L   +  V     +  +A+ YAR R     +GG      +I  P ++
Sbjct: 280 GLACMFTMMNNARLCVGLQGVGIAERATQQALAYARDRRQGRAAGGTEGMSPIIGHPDVQ 339

Query: 357 RAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +     A+  + +  A + D A        R E    A ++ P+ K +   +   
Sbjct: 340 RMLLTMKALTGASRGICYLTAEALDRAHRAPSEAERREALDRASLLTPVAKAFSTDIGIE 399

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           V +  ++  GG G++EE   A+H R++   +I  G+     +D++ 
Sbjct: 400 VASLGIQVHGGMGFVEETGAAQHLRDARIAAIYEGTNGIQAIDLVT 445


>gi|222084817|ref|YP_002543346.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221722265|gb|ACM25421.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 598

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 146/344 (42%), Gaps = 37/344 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206
           H      TSA+ ++LM  P + +     I    S E   T    M + + +  + LTE  
Sbjct: 110 HAAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSDEQKRTYLPKMVEGTWSGTMNLTEPH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGC 255
            GTD+  + ++     DG Y +SG K F+S+    M+D  +  +LA++EG       +  
Sbjct: 170 CGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHDMTDNIVHLVLARIEGAPEGTKGISL 229

Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ +  EDGS    N +    +++K+G   NAT  + +    GFL+G  N     + 
Sbjct: 230 FIVPKFMVKEDGSLGARNPVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358
            M     L   +  +S   ++   A  YAR     R +SG          +I  P ++R 
Sbjct: 290 VMMNEARLGVGLQGLSIAEIAYQNAAAYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRT 349

Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  I A + A       TAL   +A+   + K R        +  PI K           
Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRSQDEKERQAADDILGLATPILKGVLTDKGFDHA 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A +  GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG 453


>gi|313888931|ref|ZP_07822591.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845104|gb|EFR32505.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 645

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D     ++   + DG  Y L+G+K F++ +P +D +++ A     +G   
Sbjct: 125 FGLTEPNAGSDAGG--TETTAVLDGDYYILNGNKIFITNAPAADTYVVYAVTTPGIGTHG 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + +    G  +    +K+G RS+ T EL+F+N     +   N+     +  +I + 
Sbjct: 183 ISAFIVEKGWEGFTFGDHYDKLGIRSSTTAELQFNNV---KVPKENLLGKEGQGFRIAMQ 239

Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   IAD+A  I AA  
Sbjct: 240 TLDGGRIGIASQALGIAQGAFEAALAYAKERVQFGRPIAQQQAVAFKIADMATKIRAARL 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +  A      ++ S EAA A+ +A     W       V+ EA++  GG+GY++   + 
Sbjct: 300 MVYSAAEMKQNHENYSMEAAMAKTVASEVAMW-------VVNEALQIHGGNGYLKGMDVE 352

Query: 432 RHYRESPANSILLGS 446
           R +R++   +I  G+
Sbjct: 353 RFFRDAKITTIYEGT 367


>gi|300934074|ref|ZP_07149330.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 390

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 17/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGC 255
           L +TE   G D+A I S  +K  +G Y L+G K F+S+ +   F ++  V     GR G 
Sbjct: 131 LAMTEPGAGADLAGIRSFARKDENGDYILNGSKTFISNGVQADFTLVVAVTNPEAGRAGV 190

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            ++  ++EDG         LK K+G +S  T EL F +       LLG+   + G +   
Sbjct: 191 SML--IIEDGMEGYTKTGPLK-KVGLKSQDTAELSFEDVRIPKENLLGEEGAAFGYLRTN 247

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ S++  R +      +++ R   G  LID    +  +A +A  I AA + 
Sbjct: 248 LAQERLSIAVGSIATSRRAFDLVYKHSQDRKTFGNRLIDHQAYRWELAKMATSIQAAQSF 307

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                   D A     E     +   + KY   ++   V+  A++  GG G++ E  IA 
Sbjct: 308 -------VDAAIMEKVEGNLDEVTGAMAKYHTTELQIEVVNTALQLHGGYGFMMEYPIAT 360

Query: 433 HYRESPANSILLGSGNAMV 451
           HY +S    I  G    M+
Sbjct: 361 HYLDSRVQPIYGGPNEIMI 379


>gi|296137031|ref|YP_003644273.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797153|gb|ADG31943.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 598

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 148/361 (40%), Gaps = 48/361 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   GTD+  I ++     DG Y L+G K F+SS    ++D  I  +LA++ G     
Sbjct: 167 LTEPHCGTDLGLIRTKAVPQDDGSYKLTGQKIFISSGEHDLTDNIIHMVLAKLPGAPEGS 226

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +       G  NG+    +++K+G  +N+T ++   +  G+++G+ N  
Sbjct: 227 KGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   + S+    V+   A+ YAR R     ++G    D+P        
Sbjct: 287 LAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILVHP 346

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 +  RA A+    +A   +L    +    +A+ R +      ++ PI K +    
Sbjct: 347 DVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFITDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                 E ++  GG GYI E  + +  R++  N I  G+     LD+L            
Sbjct: 407 GLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG----------- 455

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIA 526
               +  D G+  +K   IL D I     ++ +  F+     LA     L    GM  +A
Sbjct: 456 --RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKAMA 513

Query: 527 D 527
           D
Sbjct: 514 D 514


>gi|255263408|ref|ZP_05342750.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
 gi|255105743|gb|EET48417.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
          Length = 592

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 150/358 (41%), Gaps = 59/358 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K + PK+ S E+  T             + LTE   GTD+  + ++     DG + +SG 
Sbjct: 146 KTYLPKLASCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSFQVSGQ 192

Query: 232 KWFLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--EDGS---PNGLCYQRL 275
           K F+S+    MSD  I  +LA++ G       V  F+VP+ L  +DGS    NG+   ++
Sbjct: 193 KIFISAGEHDMSDNIIHLVLAKIPGGPDGIKGVSLFIVPKFLVNDDGSVGARNGVSCGKI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + K+G   N+T  + +    G+L+G+ +     +  M     L   +   +    +   A
Sbjct: 253 EEKMGIHGNSTCVMNYDEATGYLIGEEHKGMRAMFVMMNEARLGVGLQGYAAAEAAYQNA 312

Query: 336 IHYA----RRRHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA    + R V+G          LI  P ++R + +    I  A A ++  AN  D A
Sbjct: 313 VIYANDRLQGRAVTGTENPEGPADPLIVHPDIRRNLMEQKSFIEGARAFTYWGANLIDRA 372

Query: 384 -KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            + R  +A     ++ PI K +           A +  GG GYIEE  +++  R++    
Sbjct: 373 HRMRDADADGLISLLTPIIKGFQTDKGFEYATAAQQVYGGHGYIEEWGMSQFARDARIAM 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           I  G+     LD++                L QD    GK V+       +  KE+KG
Sbjct: 433 IYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMVKTFIKENKG 474


>gi|323526936|ref|YP_004229089.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323383938|gb|ADX56029.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 596

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++ +   DG + + G K F++    D     A ++LA+     EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSFRIFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ VS        A A    + R + G       +++ P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVGVSERAYQKAAAYAKERVQSRPIDGSAKQSVAIVEHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           ++ +     A+ AL++  A          DEAK R+E  A    + PI K W  +++  V
Sbjct: 348 LSTMRALTEASRALAYVAAAHSDIAHRHPDEAK-RAEHQAIYEFLVPIVKGWSTELSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|291300660|ref|YP_003511938.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569880|gb|ADD42845.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 383

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 27/271 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE  GG+D A+++++  +  DG + + G K F++ + ++D   + A+  G     V C 
Sbjct: 127 LTEPSGGSDAASLSTKAVRDGDG-FVVEGTKAFITHAGVADFHSVFARTGGPGARGVSCL 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           ++P    +G+P G+  QRL++K+G  ++ T ++ F    G  +G   +         I +
Sbjct: 186 VLP----EGTP-GVVPQRLEHKMGLSASPTAQIVFD---GARVGSDCLVGEEGRGFSIAM 237

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L++  + ++   V LA+A       YAR R   G  +ID   +   +AD+A  I+AA 
Sbjct: 238 AALNAGRLGIAACAVGLAQAACDYATQYARGRRQFGSPVIDFQGVGFMLADMATQISAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +         R+ A   K +   +A  V  +A++ +GG GY+ +  +
Sbjct: 298 ALVSHAARLRDAGRG-------FRVAAAQAKLFATDVAMRVTTDAVQVLGGYGYVSDHPV 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R++RE+    I+ G+     L +   L +G
Sbjct: 351 ERYFREAKVLQIVEGTNQIQRLVISRALAQG 381


>gi|329902137|ref|ZP_08273041.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548860|gb|EGF33488.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 596

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 52/327 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE + G+D+A + S+     DG + + G K +++    D       ++LA+     E
Sbjct: 161 MNLTEPQAGSDLAMVRSRAVPQDDGSFKVFGTKIYITYGEHDMAENIIHLVLARTPSAPE 220

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           G  G   F+VP+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G
Sbjct: 221 GIKGISLFVVPKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------L 349
           + N     +E M +++      + + G+ V+     +A+ YA+ R  S  +        +
Sbjct: 281 EENRG---LEYMFVMMNAARFAVGLQGIGVADRAYQKAVRYAKDRVQSRDLAGSAGPVAI 337

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYW 403
           I QP ++R +  +   I A+ ALS+  A + D A   ++EA       +   M PI K W
Sbjct: 338 IHQPDVRRMLMTMRSQIEASRALSYVTAAAHDAALYHTDEATRKANNLFYEFMVPIVKGW 397

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +++  V +  ++  GG G+IEE   A++YR++   +I  G+     +   +L+ + T 
Sbjct: 398 STELSIDVASTGVQIHGGMGFIEETGAAQYYRDARILTIYEGT---TAIQANDLIGRKT- 453

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDS 490
                     +D G++ K +I  +R S
Sbjct: 454 ---------ARDGGANAKAIIAQVRHS 471


>gi|91215197|ref|ZP_01252169.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
 gi|91186802|gb|EAS73173.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
          Length = 388

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   +  D  + ++G K F+++ + SD  I+ A+     G   +
Sbjct: 125 LCITEPYGGSDVAGMKTTAVEKED-TFVINGSKTFITNGVYSDYLIVAAKTAPEKGGKGM 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L D    G+   +L NK+G R++ T EL F N       L+G+ N     +      
Sbjct: 184 SIFLVDRDTPGISATKL-NKLGWRASDTAELAFDNVEIPKSHLMGERNQGFPYIMQH--- 239

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L+  IM V+G      +L  AI Y   R   G  +     ++  IA+ + ++  A A 
Sbjct: 240 FALERLIMGVNGHARAEYALEYAIKYMSEREAFGQTIDKFQALRHKIAERSSEVEMAKAF 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  A   D  +   +EA  +++++        K+A  VI + ++ +GG GY+E+  +AR
Sbjct: 300 NYTTAKRLDAGEYVVKEATMSKLLS-------TKIADEVIYDCLQMLGGYGYVEDYPLAR 352

Query: 433 HYRESPANSILLGSGNAMVL 452
            +R+S    I  G G + +L
Sbjct: 353 MFRDSRLGPI--GGGTSEIL 370


>gi|78059987|ref|YP_366562.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964537|gb|ABB05918.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 596

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    +  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|330829883|ref|YP_004392835.1| acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565]
 gi|328805019|gb|AEB50218.1| Acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565]
          Length = 385

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 49/299 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIY 226
           V K+W PK+ S E                 LG   LTE   G+D AA+ ++  +  D  Y
Sbjct: 105 VAKEWVPKLASGEL----------------LGSYCLTEPGAGSDAAALKTRAVREGD-CY 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            + G K F+S +  SD  +++A+  G     +  F+VP      +  G+ Y + + K+G 
Sbjct: 148 LIEGTKVFISGAGSSDVLVVMARTGGEGAKGISAFMVP-----ANAPGVSYGKAEEKMGW 202

Query: 282 RSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            S  T E+ F+       + LG+       +   ++  +I I    A  SV   + +L +
Sbjct: 203 NSQPTREVVFNGVRIPASYRLGEEGEGFKFAMQALDGGRINI----ATCSVGTAQQALDD 258

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA 393
           A+ Y ++R   G  + +   ++  +AD+A ++AAA  L  + A+  D  A  +S   A A
Sbjct: 259 ALAYVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAADKLDRGAPDKSAWCAMA 318

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +  A    Y  C        EA++  GG GYI E  + R+ R++  + IL G+   M L
Sbjct: 319 KRFATDVGYRICD-------EALQLFGGYGYIREYPLERYLRDTRVHRILEGTNEVMRL 370


>gi|218781220|ref|YP_002432538.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762604|gb|ACL05070.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 604

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 56/344 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+      DG Y ++G+K F++     +++  I  +LA++EG     
Sbjct: 164 LTEPEAGSDVGALTTTAVPNEDGSYSITGNKIFITVGDHDLTENIIHAVLARIEGAPAGT 223

Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             V  F+VP  R+ EDGS   PN +    L+ K+G   +AT  +   +     GFLLG+ 
Sbjct: 224 AGVSLFIVPKIRVNEDGSLGIPNDVICTGLEEKMGIHGSATCSMALGSKGQCQGFLLGEA 283

Query: 303 NVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID----- 351
           N      + M+ + ++ + A ++VS   + +A      A +YA+ R V G  L D     
Sbjct: 284 N------KGMRAMFHMMNEARLAVSMQSLGIASTAYLHAANYAKER-VQGRDLSDMLNKD 336

Query: 352 --------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMA 397
                    P ++R +  +   +    +  + +A+  ++ ++  +   + R      ++ 
Sbjct: 337 AVSVPIVRHPDVRRMLTWMKAYVDGMRSFVYFIADCIEKEENSQDIEEHKRCKGLVDLLT 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K +  K    V  +A++  GG GYI E  + +  R++   S+  G+     +D+L  
Sbjct: 397 PIIKTYNAKYGFEVCVQAIQTYGGYGYIREYPVEQLLRDAKITSLYEGTDGVQAMDLLAR 456

Query: 458 ---LEKGTNLFEQLFSTLEQDLGSSGKK-VITILRDSISLCKED 497
              +E+G  +F+     +   +  + K   +  + D++  C +D
Sbjct: 457 KIGMEQGA-VFQSFIKEINNVIDRARKSDALASMADAVDQCLKD 499


>gi|148554752|ref|YP_001262334.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499942|gb|ABQ68196.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 385

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           M +  V   L +TE RGG+D+ AI+++     D  Y L+G K F+++  ++D  I+ A+ 
Sbjct: 122 MARGEVIGSLAMTEPRGGSDLRAISTRAMAFGDH-YILNGAKTFITNGYITDLIIVAAKT 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           E   G   +   L +    G+      +K+G ++    EL F +     G LLG      
Sbjct: 181 EQDDGTTGLSLFLVEADRAGVSKSMPLDKVGQKAQDAAELFFDDVHVPKGNLLG--RQGE 238

Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M+ L +  L  AI +V+G  V+L   + Y + R++ G  LID    +  +A+   
Sbjct: 239 GLHYLMQELAWERLMIAIRAVAGCEVALETTVDYVKSRNMFGKSLIDFQNTRFKLAECKT 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
               A     +      + K  +E +A A       K+WC ++   V+ E ++  GG GY
Sbjct: 299 KTQIARVYIDKCIELACDGKLDAEASAMA-------KWWCTELQNRVLDECVQFHGGYGY 351

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR + ++ A  I  G+   M
Sbjct: 352 MLEYPVARAWTDARAQMIYGGTNEIM 377


>gi|103487255|ref|YP_616816.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977332|gb|ABF53483.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 580

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 164/380 (43%), Gaps = 71/380 (18%)

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ ALM   T    + W PK+ + E++ T             + LTE   G+D+ A
Sbjct: 128 LTPGAIHALMAYGTEEQRQTWLPKLITGEWNGT-------------MNLTEPAAGSDVGA 174

Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           + S  +K+++G    +Y + G K F++    D       ++LA+  G       +  FLV
Sbjct: 175 LRSTAEKVTEGEHAGLYRIKGQKIFITFGEHDLTDNIVHLVLARTPGAPEGTRGISLFLV 234

Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
           P  RL  DG+P   NG+    +++K+G   + T  +   E  +  G ++G+     G + 
Sbjct: 235 PKYRLDADGNPTISNGVHCASIEHKLGIHGSPTAVMVYGEDEDCLGEIVGE---EMGGMR 291

Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVSG--------GILIDQ-PVMKRA 358
            M +++     ++   G+++   ++ +A  +A  R  S          + ID+ P +KR 
Sbjct: 292 AMFVMMNNARLMIGCQGIQIGERAMQQAQRFAAERVQSALAGSPDRTPVTIDKHPDVKRM 351

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAME 417
           +  +     AA AL +  A   D  K   E AA  A ++ P+ K     +   V +  ++
Sbjct: 352 LWRMRAQTEAARALVYYAAAQTDFGKLGDEAAASRADVLIPLAKAHATDIGCEVASLGIQ 411

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG G+IEE   A+HYR++    I  G+      D++                  + LG
Sbjct: 412 VHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAADLVG-----------------RKLG 454

Query: 478 SSGKKVITILRDSISLCKED 497
            +G  ++  L D I+    D
Sbjct: 455 MAGGDLVRALIDDIARGAAD 474


>gi|254483050|ref|ZP_05096285.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036735|gb|EEB77407.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 601

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 36/302 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P +    A  + ++E   G+ ++ +T+      DG Y +SG+K ++S    +       +
Sbjct: 152 PQRSGRFAGTMAMSEPGAGSSLSDLTTTAIPQQDGTYRISGNKIWISGGDHELTENIVHL 211

Query: 245 MLAQVEGRV------GCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292
           +LA+V+G V        F+VP+ +  +DGS    N +    L +K+G R   +  L F  
Sbjct: 212 VLARVKGAVKGVKGISLFIVPKFMVNDDGSLGERNDVTLAGLFHKMGGRGQTSTALNFGE 271

Query: 293 --NTFGFLLGDLNVST----GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                G+L+G+ N         + + +I++   +AI++++G + SL  A    + R  S 
Sbjct: 272 KEGAVGYLVGEENRGLMYMFHMMNEARIMVGSGAAIIALAGYQYSLDYAKERPQGRLPSA 331

Query: 347 GILIDQPVMKRAIADIALDIAAATALS----------FRLANSFDEAKSRSEEAAYARIM 396
              +  PV     AD+   + A  A S            LA+    A ++ E AA   ++
Sbjct: 332 KDPLAPPVNIIEHADVKRMLLAQKAYSEGAYALCLFGTMLADDEHTAHTQEERAAAHELL 391

Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
               P+ K W  +  P   + A++ +GG+GY+ E  +   YR++  N I  G+     LD
Sbjct: 392 DFLTPVIKSWPSEYGPKANSMAIQVLGGAGYVNEHPVEMMYRDNRLNPIHEGTTGIQSLD 451

Query: 454 VL 455
           +L
Sbjct: 452 LL 453


>gi|111024069|ref|YP_707041.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823599|gb|ABG98883.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 389

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              +G + +TE   G+D+  IT+Q  +   G Y ++G K
Sbjct: 119 WLPKLTSGEW--------------VGAIAMTEPSAGSDLQNITTQAVR-DGGDYVITGAK 163

Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            F+S+  + D  I+ A+ +   G  G  LV   + D +P G    ++ +K+G +   T E
Sbjct: 164 TFISNGRNCDLVIIAAKTDATLGAKGVSLVVAEVNDDTP-GFSRGQIFDKLGQKGQDTTE 222

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F     +   LLG+     G V+ M+ L    L   + +V+ +  ++A  I Y + R 
Sbjct: 223 LFFDGLRVSVDNLLGERE-GAGFVQLMQQLPQERLICGVAAVAAIERAVALTIEYTKSRT 281

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402
           + G  L D       + +   ++A   AL+ R++ +F D+   +          A + KY
Sbjct: 282 MFGKTLFD-------LQNTRFELAECAALA-RVSRTFIDDCIDKHLRGELDVTTAAMAKY 333

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W      AVI   ++  GG GYI E  IA+ Y ++    I  GS   M
Sbjct: 334 WLTDQQCAVIDRCLQLFGGYGYILEYPIAQMYADARIQRIYAGSNEVM 381


>gi|301632163|ref|XP_002945160.1| PREDICTED: acyl-CoA dehydrogenase-like [Xenopus (Silurana)
           tropicalis]
          Length = 385

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 33/279 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W P++ + E             +     LTE   G+D AA+ +   K  D  Y
Sbjct: 102 TPEQQAQWLPRLATGE-------------IMASFALTEPEAGSDAAALRTSAIKKGDE-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F++ +P +  F ++A+ + G  G   V   + D    G+ + +   K+G R  
Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTDPGDKGAGGVSAFIVDAQSPGISFGKNDKKMGQRGA 207

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIH 337
            T ++ F N       L+G L    G    MK+L    I++  A ++V   R  L +A+ 
Sbjct: 208 HTCDVIFDNVRVPAANLIG-LQEGQGFKTAMKVLEKGRIHI--AAVAVGCARRILRDALA 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + D  +++  +AD   ++ AA  ++   A   DE +  + EA+      
Sbjct: 265 YALERQQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDEGRDVAIEAS------ 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             TK +  +M   V   A++ +GG+GY+ E  I R YR+
Sbjct: 319 -CTKMFTTEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356


>gi|225012640|ref|ZP_03703075.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
 gi|225003173|gb|EEG41148.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
          Length = 387

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 135/265 (50%), Gaps = 27/265 (10%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           + V+IG  GLTE   G+D   +++  +K  D  + L+G K F++  +S A  ++    G 
Sbjct: 123 SGVSIGAWGLTEHNTGSDAKGMSTTAKKDGDN-WILNGTKNFITHGISGAIAVVIARSGE 181

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VST 306
            G    +   ++E G+P G    + +NK+G R++ T E+ F N    ++ D N    +  
Sbjct: 182 KGDNRGMTAFVVERGTP-GFTSGKKENKLGMRASETAEMVFDNC---IIPDQNRLGPIGD 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           G ++ MKI   LD   +S++ + + +A+     ++ Y++ R   G  +     +   IAD
Sbjct: 238 GFIQSMKI---LDGGRISIAALSLGVAKGAFNASLKYSKERKQFGRPISSFQGISFKIAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA  L+ + +   ++ K+ +++ A A++ A      C K+A     EA++  GG
Sbjct: 295 MATEIEAAVLLTEKASELKNQGKNVTQQGAMAKLFASEV---CVKVA----NEAVQIHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+ ++  + + +R+S   +I  G+
Sbjct: 348 YGFTKDFPVEKFFRDSKLCTIGEGT 372


>gi|218749864|ref|NP_001136342.1| short-chain acyl-CoA dehydrogenase [Nasonia vitripennis]
          Length = 402

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 17/270 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++  +    G Y L+G K W  +   ++  ++ A  +       +  
Sbjct: 143 LSEPGNGSDAGAASTTAKTSGSGGYLLNGTKCWITNGYEAEGIVVFATTDKAKKHKGISA 202

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + D    GL   + ++K+G R ++T  L F +     + + N+   P    KI ++ LD
Sbjct: 203 FIVDKPTPGLSLGKKEDKLGIRGSSTCSLIFEDC---KVPEENLLGEPGMGFKIAMMTLD 259

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   + +A+A     + YA +R   G  +     ++  +AD+A+ + A+  L++
Sbjct: 260 AGRIGIASQALGIAQASLDCAVEYATKRTAFGNAIAKLQAIQMKLADMAMRVEASRLLTW 319

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  K  ++EAA A++ A     +C         +A++ +GG GY+ +    RHY
Sbjct: 320 RAAYLKDNGKPYTKEAAMAKLSASEAATFCSH-------QAIQILGGMGYVTDMPAERHY 372

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           R++    I  G+     L +   L K  NL
Sbjct: 373 RDARITEIYEGTSEIQRLVIAGNLLKEYNL 402


>gi|163739914|ref|ZP_02147320.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
 gi|161386788|gb|EDQ11151.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
          Length = 592

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 162/355 (45%), Gaps = 47/355 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246
           PM     +  + LTE + G+D+  +  + ++  DG + ++G K F++     +S+  I L
Sbjct: 157 PMITGQWSGTMNLTEPQAGSDLGRVRCKAERCDDGSFAITGTKIFITYGEHDLSENIIHL 216

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                    A  +G +  F+VP+ +   DGS    N +    +++K+G R++ T  LEF 
Sbjct: 217 VLARTPDAPAGPKG-LSLFIVPKYMVQNDGSLGARNAVNCVSIEHKMGVRASPTAVLEFD 275

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRH----VS 345
              GFL+G+ N     +E M +++      + V G+ VS   L  A+ +A+ R     V 
Sbjct: 276 AAKGFLVGEENRG---LEYMFVMMTSARFSVGVQGVAVSERALQHALAFAQERQQGRPVD 332

Query: 346 G----GILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPI 399
           G     + I+Q P ++R +  +   +    AL+   A   D A S  E+A A A  + P+
Sbjct: 333 GSTKDAVSINQHPDVRRMLLRMRGMVEGGRALALATAGWLDLAHSGDEQANAMAEFLVPL 392

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K  C + +  V +  ++  GG G+IEE  +A+  R++    I  G+      D+L    
Sbjct: 393 VKGNCSERSVEVTSLGLQIHGGMGFIEETGVAQLCRDARILPIYEGTTAIQANDLLG--- 449

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
                       + +D G + ++   ++ ++      D   +R + E+++ A +A
Sbjct: 450 ----------RKVLRDGGETARRFSALIAETEDQLNSDCPQSRMIAERLSQARTA 494


>gi|149926650|ref|ZP_01914910.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149824579|gb|EDM83795.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 596

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV-EGRVGC 255
           LTE   GTD+  + S+ +  +DG Y ++G K F+SS   D       ++LA++ +  VG 
Sbjct: 167 LTEPHCGTDLGMLRSKAEPQADGSYKITGAKIFISSGEHDMAENIIHLVLARLPDAPVGT 226

Query: 256 -----FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                FLVP+ + +     G  N +    +++K+G   NAT ++      G+L+G  +  
Sbjct: 227 KGISLFLVPKFIPNADGSIGERNPIFCGAIEHKMGIHGNATCQMNLDGATGWLIGQPHRG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   + S+    V+   A+ YA+ R     ++G    D+P        
Sbjct: 287 LAAMFVMMNAARLGVGMQSLGLTEVAYQNAVVYAKDRIQGRSLTGPKSADKPADSILVHP 346

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 +  RA A+    +   TAL      S  +   R E +    +  PI K +    
Sbjct: 347 DVRKMLLTTRAYAEGGRALCMWTALELDKELSHPDEAVRKEASEMVALATPIVKAFITDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A    +  M+  GG GYI E  + ++ R+S  N I  G+     LD+L 
Sbjct: 407 AWEATSHCMQVYGGHGYIAEWGMEQYVRDSRINMIYEGTNTIQSLDLLG 455


>gi|113970269|ref|YP_734062.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113884953|gb|ABI39005.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 585

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 41/326 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK++S E+             A  + +TE + G+D+  I ++     DG Y
Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274
            +SG K F++    D       ++LA++    G   FLVP+   +     G  NG+    
Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVTVGS 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  + F    G+L+G+ N     +  M     L   I  +   + +   
Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310

Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           A  YA+ R+    +GG         +I    ++R +  I     A  ALS       D A
Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLMTIRAMTEAGRALSVFTGKQLDLA 370

Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           K   +E     A Y  ++ P+ K +           A +  GG GYI E  I +  R++ 
Sbjct: 371 KYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+     +D L     G NL
Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|257483067|ref|ZP_05637108.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 592

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA+++      
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYKITGSKIFITGGEHDLTENIIHLVLAKLQDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA+ R  S               +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|256822625|ref|YP_003146588.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256796164|gb|ACV26820.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 565

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 35/310 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   G+D+  + ++ +   DG Y LSG K F++     M+D  I L         A  
Sbjct: 164 LTEAHAGSDLGILKTKAEPQEDGTYKLSGSKIFITGGEHDMTDNIIHLVLARLPDAPAGP 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+ +  +DGS    NG+    +++K+G ++++T  +   +  GF++G  + 
Sbjct: 224 KG-ISLFLVPKFMVNDDGSLGERNGIRCGSIEHKMGIKASSTCVINMDDATGFIIGGPHQ 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGILIDQPVMK-----R 357
               +  M  L  L   +  V    +S  +A  YA  R +  + G+    P+++     R
Sbjct: 283 GLRCMFTMMNLERLSIGLQGVGLGEMSYQQAFDYANDRLQGRAEGVEGTAPIIRHGDVQR 342

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411
            +  +     A  AL+  L    DEA    +EA  ++      ++ P+ K +   +   V
Sbjct: 343 MLKTMQAYTQAGRALAVWLGAWLDEAFHSEDEAVVSKAQNMAALLTPVAKAFFTDIGYEV 402

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468
                +  GG GY+ E  + +H R++    I  G+     LD++    +  KG  L E L
Sbjct: 403 CTIGQQVFGGHGYVREWGMEQHVRDARIAQIYEGTNGIQALDLIGRKIVSNKGAFLSE-L 461

Query: 469 FSTLEQDLGS 478
            + +  D+ S
Sbjct: 462 LTDMRDDMQS 471


>gi|326329425|ref|ZP_08195749.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952751|gb|EGD44767.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 377

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 27/313 (8%)

Query: 151 LMSPSVTSASMVALMT----TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           +MS   +S  +  L T     P + K  +P +      PT           IG L +TE 
Sbjct: 69  MMSEGASSGLLAGLFTHGIALPHIAKHGSPHLIETYVKPTLAGEK------IGSLAITEP 122

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D++ + +   +  D  + ++G K F++S +   F+  A   G  G   +  L+ D 
Sbjct: 123 DGGSDVSHLRTTAVRDGDE-FVVNGAKTFITSGVRADFVTTAVRTGGPGAGGISLLVIDK 181

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G + + T EL F +     G L+GD N     + +  +   +  A+
Sbjct: 182 DTPGFTVTRKLEKMGWKCSDTAELAFEDVRVPAGNLVGDENAGFIYIAEAFVTERIALAV 241

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                    LA    Y R+R   G  LI + V++  + ++   +  A A +  +   +D 
Sbjct: 242 QGYGTAARCLALTADYCRQRETFGEPLIKRQVVRHKLVEMHRQVEVAKAYTHAVVARYDR 301

Query: 383 AKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             S  +   EAA A+  A     W       V+ +A++  GG+GY+    + RHYR+  A
Sbjct: 302 EGSTQQTIAEAALAKQTAVEACTW-------VVDQAVQLHGGTGYMHGTEVERHYRD--A 352

Query: 440 NSILLGSGNAMVL 452
             + +G G   V+
Sbjct: 353 RILPIGGGATEVM 365


>gi|222479743|ref|YP_002565980.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452645|gb|ACM56910.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 384

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 127/260 (48%), Gaps = 23/260 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML----AQVEGR 252
           +G  ++E + G+D+ ++ ++ +K  D  + ++G K W  +  ++D F+++     +++ R
Sbjct: 120 MGSAISEPQAGSDVTSVATRAEKDGDE-WVINGSKMWITNGTVADYFVVVCETDPEIDDR 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVED 311
              +   ++L +G  +GL   ++  K+G R++ T EL F +     + D N +    +  
Sbjct: 179 YSGY--SQILVEGDRDGLTRDKITGKLGIRASDTAELRFDDV---RVPDENLIGQRGMGF 233

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           ++++ + D    +V+   V +A      A+ YA  R      + D   +K  +A++  + 
Sbjct: 234 LQLMQFFDETRTAVAAQGVGIARGAAERALEYAEEREQFDRPISDFQAIKHKLAEMHTNT 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++R A + D       E+     +A + K +  + A  V  EA++  GG+GY+ 
Sbjct: 294 EAARWLTYRSAWAVDN------ESGDLTALASMAKEFASRTAVEVANEAVQVHGGAGYVN 347

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R YR++    I  G+
Sbjct: 348 DHDVERLYRDAKITQIYEGT 367


>gi|116751348|ref|YP_848035.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116700412|gb|ABK19600.1| butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 400

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 36/277 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K  +     LTE   GTD+AA ++    + DG  Y L+G K F+S +P++  FI+ A
Sbjct: 134 PLCKGQILGSFALTEPGAGTDVAAGSTTA--VLDGDSYVLNGTKMFISNAPVAGVFIIFA 191

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +   G      F+VP        +G+      NK+G R   T E+   N     G LL
Sbjct: 192 STDKSKGPKGLSAFIVP-----ADTSGIKPGEHLNKMGIRGALTSEVVLKNCRIPKGNLL 246

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
           G      G  +  KI ++ LD   + ++   + +A     E+IHY++ R   G  +    
Sbjct: 247 G------GEGQGFKIAMMTLDGGRIGIAAQALGIAQAALDESIHYSKERVQFGKPISSFQ 300

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A ++ A+  L++  A  +D+    S+EAA A++ A  T       A     
Sbjct: 301 AIQWMLADMATEVEASRFLTYHAAWCYDQGLPYSKEAAMAKLHAAET-------AARQTN 353

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A++  GG G+I+   + R YR++    I  G+   M
Sbjct: 354 RAIQIHGGIGFIKGHKVERLYRDAKITEIYEGTSEVM 390


>gi|91225743|ref|ZP_01260772.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91189632|gb|EAS75907.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 384

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 22/302 (7%)

Query: 160 SMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITS 216
           S  A MT   +H    W    F+ +   T   P   T   +G   LTE   G+D A++ +
Sbjct: 82  STTAFMT---IHNMVSWMIASFATDEAKTQFCPKLVTGEWLGSYCLTEPNAGSDAASLAT 138

Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
              K  D  Y L+G K F+S +  +D  +++A+  G  G   V   +     +G+ Y R 
Sbjct: 139 TASKKGD-TYVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSAFVIPAHADGISYGRK 196

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRV 330
           + K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + 
Sbjct: 197 EPKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQ 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D  ++  +  
Sbjct: 255 ALERAARYIQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLD--RNDPDAT 312

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           AY      + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL G+   M
Sbjct: 313 AYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTNEIM 368

Query: 451 VL 452
            L
Sbjct: 369 RL 370


>gi|237796728|ref|YP_002864280.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|229261133|gb|ACQ52166.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 377

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 27/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG++N  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RA 358
            G +  MK L    +  A  ++   + ++ EA+ YA++R        ++P+ K       
Sbjct: 228 KGFITAMKTLSVGRIGVASQAIGIAQAAVDEAVKYAKQRK-----QFNRPIAKFQGIQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++ 
Sbjct: 283 LADMETKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAEAAIQIVNDALQI 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
            GG GYI++  I R YR+    +I  G+     + +  NLL+
Sbjct: 336 HGGYGYIKDYKIERLYRDVRVIAIYEGTSQVQQMVIASNLLK 377


>gi|54020956|ref|NP_001005724.1| acyl-CoA dehydrogenase, short/branched chain [Xenopus (Silurana)
           tropicalis]
 gi|49523138|gb|AAH75324.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus
           (Silurana) tropicalis]
          Length = 361

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ +  QK  D  Y ++G K W  +S  +  F+++A      G     C
Sbjct: 105 LSEAESGSDAFSLRTSAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 163

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP+  E     G    + ++K+G R+++T  L F N       +LG L         M
Sbjct: 164 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESNILGQLGHGYKYAIGM 218

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+   + +S   + LA+      I Y ++R   G  + D   M+  I+ +A  + 
Sbjct: 219 -----LNEGRIGISAQMLGLAQGCFDHTIPYTKQRVQFGKRIFDFQGMQHQISHVATQLE 273

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L++  A   +  +   +EA  A       KY+  ++A    ++ +E +GG GY ++
Sbjct: 274 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFSSEVACLTTSKCIEWMGGVGYTKD 326

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             I ++YR++   +I  G+ N  +  +  L+E
Sbjct: 327 YPIEKYYRDAKIGTIYEGTSNIQLSTIAKLIE 358


>gi|170723989|ref|YP_001751677.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169761992|gb|ACA75308.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 592

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 36/342 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNDDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R              +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATAERSYQNAVEYARDRLQSRAPTGPQAKEKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +   I    A S  +A   D AK   E     R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEEPGTRKRSEELVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G   +
Sbjct: 406 GLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYY 465

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           +     + Q + S+G  +   ++   +   +  GL  ++ E+
Sbjct: 466 KLFSEEIRQFIASAGGDLDEFVKPLGAYLDQLDGLTEWVLEQ 507


>gi|89092144|ref|ZP_01165099.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92]
 gi|89083879|gb|EAR63096.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92]
          Length = 595

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 35/297 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +   DG Y +SG K F+S+   D       I+LA++    EG 
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQEDGSYKISGTKIFISAGEHDMADNIVHIVLARLPDAPEGT 224

Query: 253 VGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G   F+VP+ L +  G  NG+    L++K+G   NAT  + F N  G+L+G  N     
Sbjct: 225 KGISLFIVPKHLPETLGEDNGVSCGSLEHKMGIHGNATCVMNFDNATGYLIGPANKGLNC 284

Query: 309 VEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQP---------VM 355
           +        L +A+  ++    G + SL  A    + R ++G    D+P         V 
Sbjct: 285 MFTFMNTARLGTALQGLAHAEWGFQNSLVYAKDRLQMRALTGPARPDKPADPIIVHPEVR 344

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYAR----IMAPITKYWCCKMAPA 410
           K  +   A       AL +  A   D+ K +  EE A A      + PI K +  ++   
Sbjct: 345 KMLLTQKAF-AEGGRALIYYCAQLVDKVKLAEGEEKAQADALLAFLTPIAKAFLTEVGFE 403

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G +L
Sbjct: 404 SANHGLQIFGGHGFIAEWGMEQNVRDSRISMLYEGTTQIQALDLLGRKVLMTQGESL 460


>gi|325523272|gb|EGD01632.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 596

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 59/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +A+     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVADRAYRKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   
Sbjct: 346 RMLGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVND 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 406 VASLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|192289455|ref|YP_001990060.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283204|gb|ACE99584.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 593

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 189/457 (41%), Gaps = 60/457 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114
            G+Y    TAQ L     + +  L      G++        KV   P W    +R I  G
Sbjct: 29  FGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +       F       A       ++  + +  G  + P +T +++ AL T  +  + +
Sbjct: 89  WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDALKQ 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T    MQ         LTE + G+D+ A+ ++ ++ +DG Y + G K
Sbjct: 147 VYLGKLISGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYRIFGSK 193

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275
            F++     M+D  +           A  +G +  FLVP+ L +     G+ N +    +
Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVNADGTLGARNDIYPSGV 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  ++ T  +   +     G+L+G+ N     +  M     L   +  V     + 
Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAA------TALSFRLA 377
            +A+ YA+ R     +         +I  P +KR +  +   I AA      TA++  +A
Sbjct: 313 QQALAYAQERKQGRAVGSAGPGSDPIIKHPDVKRTLLTMRALIGAARTICYSTAVALDIA 372

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + K ++   A   ++ PI K +   +   V +  ++  GG G+IEE   A+HYR++
Sbjct: 373 ARSTDPKVKASATARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
               I  G+     +D++   + G N    +F+ L++
Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGANGGASVFALLDE 468


>gi|320333820|ref|YP_004170531.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus
           maricopensis DSM 21211]
 gi|319755109|gb|ADV66866.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus
           maricopensis DSM 21211]
          Length = 599

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 164/387 (42%), Gaps = 56/387 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + L+E   G+ +A IT+      DG Y ++G K ++S     +S+  +  +LA+  G   
Sbjct: 161 MALSEPHAGSGLADITTLATPRDDGTYTVAGTKMWISGGEHELSENILHLVLARTPGAPP 220

Query: 253 ----VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
               +  FLVPR  + +DG   + N +    L +K+G R      L F           G
Sbjct: 221 GVKGISLFLVPRYRVTDDGRAGASNHVVLAGLNHKLGYRGTTNTLLNFGEGGDSLGELVG 280

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L G LN     + + +I + L + ++ V+G + SLA A    + R  S       PV  
Sbjct: 281 TLGGGLNAMFHMMNEARIGVGLGATMLGVAGYQYSLAYARERTQGRAASTRDPSSPPVPI 340

Query: 357 RAIADI-------ALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403
            A AD+          +  A AL    A   D+ ++      R+       ++ P+ K W
Sbjct: 341 IAHADVRRMLLAQKATVEGALALGLYAARLVDDERTADTPEERATATLLLDLLTPLAKAW 400

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
                   +  A++ +GG+GY  +  + + +R++  N I  G+     LD+L   +   G
Sbjct: 401 PSSHVQTALDHALQILGGAGYTRDHPVEQLWRDNRLNPIHEGTNGIQGLDLLGRKVTAHG 460

Query: 462 TNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
               + L   + QDL ++ G   + ++RD++               + AL +SA AL +A
Sbjct: 461 GRSLQLLAQAVTQDLAAAEGLPDVQVIRDAV---------------RHALTTSAQAL-QA 504

Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHG 547
            +    D+   +RFL N  S   ML G
Sbjct: 505 ILTQAPDLG-PDRFLANADSALEMLGG 530


>gi|114047542|ref|YP_738092.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113888984|gb|ABI43035.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 585

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 41/326 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK++S E+             A  + +TE + G+D+  I ++     DG Y
Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274
            +SG K F++    D       ++LA++    G   FLVP+   +     G  NG+    
Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVTVGS 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  + F    G+L+G+ N     +  M     L   I  +   + +   
Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310

Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           A  YA+ R+    +GG         +I    ++R +  I     A  ALS       D A
Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLA 370

Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           K   +E     A Y  ++ P+ K +           A +  GG GYI E  I +  R++ 
Sbjct: 371 KYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+     +D L     G NL
Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|262376517|ref|ZP_06069746.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308656|gb|EEY89790.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 593

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 56/376 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK ++ E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 151 YLPKFYTGEWSGT-------------MCLTEPHSGTDLGIIKTKAEPNEDGSYNITGTKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++S   D       ++LA+          +  F+VP+ L +     G  N +    +++
Sbjct: 198 FITSGEHDLSENIIHLVLAKTPNAPAGSRGISLFIVPKFLVNADGSVGERNAVSAGSIEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G + +AT  + F    G+++G+ N     +  M     L   I  +     +   A  
Sbjct: 258 KMGIKGSATCVMNFDGAKGYMVGNENEGLAGMFVMMNYERLSMGIQGIGAAEFAYQNAAQ 317

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  +G    ++P         ++R + ++  +  A+ A +  +    D  K 
Sbjct: 318 YATDRLQGRASTGAKSPEKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKY 377

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A  +      ++ PI K +    A     EA  C GG GYI E  + +  R+   
Sbjct: 378 STDPEAVRKATDRVALLTPIAKAYLTDKALDSALEAQMCFGGHGYIREWGMEQCIRDLRI 437

Query: 440 NSILLGSGNAMVLDVLNLLE---KGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC 494
           + I  G+     +D++        GT + E +    E  Q+L  S    +TI   ++  C
Sbjct: 438 SQIYEGTNGVQAIDLIGRKTTKCNGTYIAEYIAEIREFAQNLDDS----LTIKTATLEAC 493

Query: 495 KEDKGLARFLTEKIAL 510
           ++ + + +F+ E+  L
Sbjct: 494 QQLEDITKFIVEQSKL 509


>gi|296804532|ref|XP_002843118.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238845720|gb|EEQ35382.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 425

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 27/246 (10%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++  T++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 163 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 222

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           ++ R  +   P  L    +KNK   R++ T  ++  N       +  +++   GP     
Sbjct: 223 VIER--DQCPPGTLSTPAIKNKTALRASITGMIQMDNCPVPEANMFPEVSGLVGP----- 275

Query: 314 ILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIA 367
               L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D A
Sbjct: 276 -FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDAA 334

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +E
Sbjct: 335 YGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGARTLQEIFGGNAASDE 387

Query: 428 RSIARH 433
             I RH
Sbjct: 388 YHIGRH 393


>gi|301096828|ref|XP_002897510.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
 gi|262106970|gb|EEY65022.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
          Length = 413

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 28/276 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++  +    G Y L+G K W  ++  +D  I+ A  +       +
Sbjct: 151 FGLSEPGNGSDAGAASTTARSTDKG-YVLNGTKAWITNAHDADQAIVFATTDKSLKHKGI 209

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         G    + ++K+G R+++T  L F +     +   N+     +  K
Sbjct: 210 SAFLVPT-----DAPGFSLGKKEDKLGIRASSTGNLIFEDV---EVPKENLLGKEGDGFK 261

Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +I LDS  + ++   + +A+A     I YA+ R   G  +   P+++  ++ +A +I 
Sbjct: 262 IAMITLDSGRIGIASQALGIAQASYDCAIAYAQTRKTFGVPIAKNPIIQTKLSTMATEIE 321

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+++ A   D  +  ++ AA A++ A      C         +A++ +GG GY+ E
Sbjct: 322 AARLLAWKAAVEKDAGRPFTKLAAMAKLKASEAATMCSH-------QAIQVLGGMGYVFE 374

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
               RHYR++    I  G+   M L +   L K  N
Sbjct: 375 MPAERHYRDARITEIYEGTSEIMHLVIGGALNKEFN 410


>gi|242010283|ref|XP_002425898.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212509874|gb|EEB13160.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 338

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 33/282 (11%)

Query: 195 SVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE 250
           SVAI +G   LTE   G+D  A+ +  ++  D  + L+G K W  +S ++  FI+ A  +
Sbjct: 71  SVAILVGSFCLTEPYSGSDAFAMKTSAKQEGD-YFILNGSKMWISNSDIAKFFIVFANAD 129

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGDLN 303
              G   +   L +    GL   + +NK+G R++ T ++ F N         G L     
Sbjct: 130 SSKGYRGITTFLVERDAPGLSVGKKENKLGIRASGTCQVNFDNVKIHKSAVLGELYQGYK 189

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
            + G         +L+ + + V+   + LA+      I Y   R   G  + D   M+  
Sbjct: 190 YAAG---------FLNESRIGVAAQMLGLAQGCFDVTIPYTLERKQFGHKIFDFQAMQHQ 240

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IADIA+ +  +  L +  +   +   S ++EA+ A       K++  +MA  V    ++ 
Sbjct: 241 IADIAVKLECSRLLVYNASRRVEAGISFAKEASMA-------KFYVTEMAHEVTKRCIDW 293

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           IGG G+ ++    + YR+    +I  G+ N  +  +   L+K
Sbjct: 294 IGGVGFTKDFPQEKFYRDCKIGTIYEGTSNIQLNTIAKFLKK 335


>gi|239827224|ref|YP_002949848.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239807517|gb|ACS24582.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 380

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     +    + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAEYARQVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V G+   G  ++  ++      G   +   +K+G R++ T EL F N     +   NV  
Sbjct: 171 VTGKDERGKNIISAIIVPTDTPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +A
Sbjct: 228 DPKKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C        +A++  G
Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GY++E  + RH R+
Sbjct: 341 GYGYMKEYGVERHLRD 356


>gi|218778066|ref|YP_002429384.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759450|gb|ACL01916.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 604

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 51/298 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252
           LTE   G+D+  +++  +K  DG Y ++G+K F++     +++  I  +LA++EG     
Sbjct: 164 LTEAEAGSDVGNLSTTARKNDDGTYSITGNKIFITYGEHDLTENIIHPVLARIEGAPAGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             +  F+VP++   +DGS   PN +    ++ K+G  +++T  L F       G+LLG+ 
Sbjct: 224 AGISIFIVPKIWVNDDGSLGEPNDVVCTGIEEKMGIHASSTCSLAFGGKGQCRGYLLGEE 283

Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------- 349
           N      + MK++        L+      S   V+   A +YA+ R + G  L       
Sbjct: 284 N------KGMKVMFLMMNEARLNVGFQGFSAASVAYMYACNYAKER-IQGRALEDSANKD 336

Query: 350 ------IDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIM---A 397
                 I+ P ++R +  +        +  + +A+ FD+   A+S  E   + +++    
Sbjct: 337 AKPVAIINHPDVRRNLLTMKAYTDGMRSFIYYVADLFDKEELAESPEEADRFNKLIQLYT 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           P+ K +C      + +  ++  GG GYI E  + +  R++   SI  G+     +D++
Sbjct: 397 PVIKAYCTDKGFELASTGIQVYGGYGYISEYPMEQILRDAKIGSIYEGTNGIQAMDLI 454


>gi|187776796|ref|ZP_02993269.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC
           15579]
 gi|187775455|gb|EDU39257.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC
           15579]
          Length = 377

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG+LN  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELN-- 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  MK L    +  A  ++   + ++ EA+ YA++R      +     ++  +A++ 
Sbjct: 228 KGFITAMKTLSVGRIGVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++  GG G
Sbjct: 288 TKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI++  I R YR+    +I  G+
Sbjct: 341 YIKDYKIERLYRDVRVIAIYEGT 363


>gi|323366578|gb|ADX43863.1| CarC [Acetobacterium woodii]
          Length = 352

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+      +   LTE   G+D   +++    + D  Y L+G K F++ +P+ D  ++ A+
Sbjct: 85  PIITGKKKLAFALTEPGAGSDAGGMSTTAVDMGD-YYLLNGRKTFITMAPLCDDAVIYAK 143

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301
            +   G   +   + D    G+   + ++K+G    AT       V++   N  G     
Sbjct: 144 TDMSKGTRGISAFIVDLKSEGVSMGKNEHKMGLIGCATSDIIMEDVKVPKENRLG----- 198

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             V+ G    MK L    L  A  S+   + +L EAI YA+ R   G  + D   +   I
Sbjct: 199 -EVNKGFSNAMKTLDVGRLGVASQSIGVAQGALDEAIKYAKERKQFGKRIADFQAIAFMI 257

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA  L +  A+  D  K+ ++EA+ A       K++  ++   + A+A++  
Sbjct: 258 ADMATKLEAAKLLVYNAASLMDNKKNATKEASMA-------KFYASEICNEICAKAVQIH 310

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GYI+E  + R YR+    +I  G+     + +  +L K
Sbjct: 311 GGYGYIKEYKVERMYRDCRVFTIYEGTSQVQQMVISGMLLK 351


>gi|212638028|ref|YP_002314548.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212559508|gb|ACJ32563.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 380

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 31/261 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D  A  +Q + + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGEAFGSFGLTEPNAGSD--AGGTQTRAVLDGDEYVINGEKCWITNAGYARQVIVTA 170

Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           V G+       +  F+VP         G       +K+G R++ T EL   +     +  
Sbjct: 171 VTGKDERGKNIISAFIVPT-----DAPGFTINCHYDKMGVRASNTCELVLQDV---RVPK 222

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
            N+   P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     +
Sbjct: 223 ENILGDPKKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERKQFGQPIAKFQAI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A+ +  A  + ++ A   D+ K  ++EAA+A++ A  T +  C        +A
Sbjct: 283 QFKLADMAMQLELARNMVYKAAWLKDQGKPFTKEAAFAKLFASETGFHICN-------QA 335

Query: 416 MECIGGSGYIEERSIARHYRE 436
           ++  GG GY++E  + RH R+
Sbjct: 336 IQIHGGYGYMKEYGVERHLRD 356


>gi|332373428|gb|AEE61855.1| unknown [Dendroctonus ponderosae]
          Length = 416

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 37/297 (12%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +H      +F +  +   K    P   T +     LTE   GTD  A+ +  +K+ D  Y
Sbjct: 123 IHNTLVNSVFFKYANEAQKEKYLPKLATEMVGSFALTEPSSGTDAFALKTTAKKVGDE-Y 181

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            L+G K W  +S  S  F+++A  +   G     CF+V R     +P G    R +NK+G
Sbjct: 182 VLNGSKMWISNSDFSGVFLVMANADTSKGYKGISCFIVDR----DTP-GFTINRPENKLG 236

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA- 335
             ++ T  L F +       LLG++       +  KI I  L+   + ++   + LA+  
Sbjct: 237 IVASGTCMLTFEDVKIPTSHLLGEIG------QGYKIAIDILNEGRIGIAAQMLGLAQGC 290

Query: 336 ----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
               I Y   R   G  + +   M+  IA+IA +I AA  L++  A   ++     +EA+
Sbjct: 291 FDATIPYTLERQQFGQPIFNFQAMQHQIAEIATEIEAARLLTYNAARLLEQKVPYIKEAS 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A++       +  ++A     + ++ +GG G+ ++    + YR+    SI  G+ N
Sbjct: 351 MAKL-------YASEVAQRTTIKCIDWMGGVGFTKDFPQEKFYRDCKIGSIYEGTSN 400


>gi|321468573|gb|EFX79557.1| hypothetical protein DAPPUDRAFT_304439 [Daphnia pulex]
          Length = 406

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++     +DG + L+G K W  +   S+A ++ A  +       +  
Sbjct: 147 LSEPGNGSDAGAASTTAVTSADGGWTLNGTKAWITNGYESEATVVFATTDKSLKHKGISA 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP+        GL   + ++K+G R ++T  L F +     +   N+   P    KI 
Sbjct: 207 FVVPK-----PTPGLSLGKKEDKLGIRGSSTCNLIFEDCH---IAKDNLLGKPGLGFKIA 258

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + + +A     + YA +R   G  +     ++  IAD+AL + +A
Sbjct: 259 MSILDGGRIGIAAQALGIGQAALDCAVDYASKRKAFGQPITKLQSIQNKIADMALQLESA 318

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R A   DE ++  +EAA A++ A        + A  +  +A++ +GG GY+ +  
Sbjct: 319 RLLTWRAAALQDEGRAFIKEAAMAKLAA-------SEAATFISHQAIQILGGMGYVSDMP 371

Query: 430 IARHYRESPANSILLGS 446
             RHYR++    I  G+
Sbjct: 372 AERHYRDARITEIYEGT 388


>gi|311742051|ref|ZP_07715861.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314544|gb|EFQ84451.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 384

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 9/259 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE  GG+D+A I ++  +  D  Y ++G K F++S +   F+      G  G   + 
Sbjct: 125 LGVTEPGGGSDVANIRTKAVR-DDDHYVVNGAKTFITSGVRADFVTTVVRTGGEGYGGIS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ D    G        K+G   + T EL F +       L+G+ N     V    +  
Sbjct: 184 LLVIDKDAPGFTVTGPLRKMGWHCSDTAELSFEDVRVPAENLVGEENGGFVLVMQQFVNE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ + +  + +   A+ YAR+R   G  LI + V++  + D+    AAA AL+ + 
Sbjct: 244 RLGLAVQAYATAQRATDLAVEYARQRETFGKPLITRQVIRHKLVDMQRRTAAARALTRQA 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +  +         ++A   K    +    V+ EA++  GG GY+ E  I RHYR+
Sbjct: 304 VERSIDGSTTDPSIILDAVLA---KNTAVEAVEHVVTEAVQIFGGMGYMRESEIDRHYRD 360

Query: 437 SPANSILLGSGNAMVLDVL 455
             A  I +G G   VL+ L
Sbjct: 361 --ARIIGIGGGATEVLNDL 377


>gi|86139041|ref|ZP_01057612.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85824272|gb|EAQ44476.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 567

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 34/301 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+     DG Y ++G K ++
Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSKAVPNGDGTYAVTGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           S   +D       ++LA+    V G  G   FLVP+ + +     G+ N L    L++K+
Sbjct: 197 SWGDNDFAENVCHLVLARLPDGVPGTKGISLFLVPKYIPNADGSLGAANSLGVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  ++F    G+L+G  +     +  M     L      V     +  +A  YA
Sbjct: 257 GLHGSPTCVMQFDGAKGWLVGAEHAGMAAMFTMMNNARLGVGGQGVGVAEGAFQKATAYA 316

Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394
             R       G + D   ++R + ++  D  A+ A+    A++ D   A   ++  A A 
Sbjct: 317 LERKQGKTPSGSIADHADVRRMLMEMKADTYASRAIMLACAHAIDMGNATDEADWKARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            + PI+K +       +    ++  GG G+IEE   A+  R+    SI  G+     +D+
Sbjct: 377 FLTPISKAFGTDTGIRIADMGIQVHGGMGFIEETGAAQFLRDVRVTSIYEGTNGIQAMDL 436

Query: 455 L 455
           +
Sbjct: 437 V 437


>gi|307546535|ref|YP_003899014.1| acyl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307218559|emb|CBV43829.1| probable acyl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 595

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +  A   AL+   +      W  KI S E+  T             + LTE + G+
Sbjct: 125 MLPQLNVAQAEALLFAASEAQKATWLEKIVSGEWTAT-------------MNLTEPQAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+AA   + +    G Y L G K ++S    +       ++LA++    EG  G   FLV
Sbjct: 172 DLAATRMRAEPDESGNYRLHGQKIYISYGEHELTPNILHLVLARLPDAPEGVKGLSLFLV 231

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L     E G  N +    +++K+G   + T  L + +     G L+G+      P  
Sbjct: 232 PKYLLDERGEPGEKNDVRCISIEHKMGIHGSPTCTLSYGDHDGAIGQLIGE------PHT 285

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI---LIDQPVMK 356
            +K + I ++ A   V    ++L E     A+ +AR R      VSG +   ++  P +K
Sbjct: 286 GLKTMFIMMNEARFGVGVQGLALGERAYQAALDHARERVQGRNVVSGEMGLPILHHPDVK 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSE-EAA-----YARIMAPITKYWCCKMAPA 410
           R +  +   + A     +  A  FD A+   + E A     +  ++ P+ K WC ++  A
Sbjct: 346 RMLVGMRARLLAMRTFLYTAAGWFDLARHHPDAEVADKHRRHVDLLMPVAKGWCSELGNA 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQ 467
           +  EA++  GG G++EE  +A+ +R++   +I  G+      D+L    L + G  L E 
Sbjct: 406 LCDEAIQVFGGMGFVEETGVAQLFRDARIITIYEGTTGIQANDLLGRKILHDNGATLREL 465

Query: 468 L 468
           L
Sbjct: 466 L 466


>gi|221065119|ref|ZP_03541224.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710142|gb|EED65510.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 587

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%)

Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           LTE   G+D+  + +Q    G       + +SG K F+S    D       ++LA++ G 
Sbjct: 164 LTEAHAGSDLGQVRTQAVPAGASELGERFEISGSKIFISGGEHDLSANIVHLVLARLPGA 223

Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  FLVP+LL  G  NG+  +R++ K+G   + T  + F    G+L+G      
Sbjct: 224 PAGPRGLSLFLVPKLLPGGERNGVVCERIEEKMGLHGSPTCVMRFEAAQGWLIGQPGAGL 283

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351
             +  M     L  A+  +  +  +  +A  YA  RR+  + G             ++I+
Sbjct: 284 NAMFVMMNAARLHVALQGMGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIE 343

Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P       ++RA  D    +A  T +   +A   + A+ R +   +  ++ PI K    
Sbjct: 344 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPILKSAWT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
           + A    +  ++  GG GYI E  I +  R+S    I  G+     +D+L   +L  G  
Sbjct: 404 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501
              Q    L + L +       +LR    L          CKED  LA
Sbjct: 464 AMGQWLLGLRKSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 511


>gi|209519037|ref|ZP_03267845.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209500549|gb|EEA00597.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 595

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 47/323 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270
            +SG K F+SS   D       ++LA++    +G  G   F+VP+ +     E G  NG+
Sbjct: 191 SISGTKIFISSGEHDLAENIIHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+++G+ N     +  M     L   + S+    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVINLDNANGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310

Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R              +   +I  P ++R +        A  A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGRAFTYWSAL 370

Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+  S      R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
           + R++  N I  G+     LD+L
Sbjct: 431 YVRDARINMIYEGTNGIQSLDLL 453


>gi|328854905|gb|EGG04035.1| hypothetical protein MELLADRAFT_49293 [Melampsora larici-populina
           98AG31]
          Length = 426

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   TS      L+E   G+D  A+ ++  K S+G Y ++G K W  +S  ++ F++ A 
Sbjct: 157 PKLATSKVACFCLSEPSSGSDAFALKTKVTKDSNGNYVVNGSKMWITNSKEAEIFVVFAN 216

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ + G     CFLV + +      G+   + + K+G ++++T  L F N    ++   N
Sbjct: 217 LDPQKGYKGICCFLVEKEM------GVQVAKKEQKLGIKASSTCTLNFDNV---VVPKEN 267

Query: 304 VSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     +  K  I  L+   + ++   + LA+     ++ Y  +R   G  + +   M+ 
Sbjct: 268 LIGEEGKGYKYAIEILNEGRIGIAAQMIGLAQGAFDKSVSYTYQREQFGRPIGEFQGMQF 327

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             ADI  +I AA  L++  A   +E+K  +E       MA + K +  ++A      A+E
Sbjct: 328 QFADIQTEIEAARLLTYNAARLKEESKPFTE-------MAAMAKLFSSEVAQRASGSAIE 380

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
             GG G+  E  I +++R+S   +I  G+ N
Sbjct: 381 WCGGVGFTRETGIEKYWRDSKIGAIYEGTSN 411


>gi|119718773|ref|YP_925738.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539434|gb|ABL84051.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 29/318 (9%)

Query: 145 QLEAGHLMSPSVTSASMVALMTT----PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +L+ G +     +S  M  L T     P +    +P +  R   PT     +K      L
Sbjct: 76  ELQEG-MFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPTLAG--EKIGA---L 129

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFL 257
           G+TE  GG+D+A I +  ++  D +Y ++G K F++S +   F+  A     +G  G  L
Sbjct: 130 GVTEPGGGSDVAGIRTTARREGD-VYVVNGAKTFITSGVRGDFVTTAVRTGPDGHAGLSL 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  ++E G+P G    R   K+G   + T EL F +       L+G+ N     + +  +
Sbjct: 189 L--VIEKGAP-GFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYIAEQFV 245

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L  A+ +      SL     Y R R   G  LI   V++  + ++   +  A A + 
Sbjct: 246 VERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVARAYAR 305

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A      +S   E   A       K   C  A  V  +A++  GG+GY+    + RHY
Sbjct: 306 EVARRHAAGESVIAEVCLA-------KQTACDAATYVCDQAVQLHGGTGYMHGTEVERHY 358

Query: 435 RESPANSILLGSGNAMVL 452
           R+  A  + +G G   VL
Sbjct: 359 RD--ARILPIGGGATEVL 374


>gi|327482498|gb|AEA85808.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 619

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 142/342 (41%), Gaps = 51/342 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  L    TP   + +  K+ S ++  T             + LTE   GT
Sbjct: 144 MYPGLSHGAMNTLHAHGTPEQQQTYLTKLVSGQWTGT-------------MCLTEPHCGT 190

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 191 DLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMAENIVHIVLARLPDAPAGTKGISLFIV 250

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L     E G  NG+    +++K+G   NAT  + F    GFL+G  N     +    
Sbjct: 251 PKFLPNAEGEAGERNGVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKGLNCMFTFM 310

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    I YAR R              +   +I  P ++R +  
Sbjct: 311 NTARLGTALQGLAHAEVAFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 370

Query: 362 IALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +        A+ +  A        S DE + ++ +A  A  + PI K +  ++       
Sbjct: 371 MKAFAEGNRAMLYFAAKQVDVMQRSQDEEQRKAADAMLA-FLTPIAKAFMTEVGFEAANH 429

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 430 GVQIYGGHGFIAEWGMEQNVRDSRISCLYEGTTGIQALDLLG 471


>gi|256374678|ref|YP_003098338.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255918981|gb|ACU34492.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 40/306 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +S  V S+  +    TP     W P     E             +  G  L+E   G+D 
Sbjct: 90  LSVHVMSSYALVNFGTPEQRAKWLPDALGGE-------------LLGGYALSESHAGSDA 136

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCFLVPRLLEDGS 266
           AA++++  +  D  Y + G K W     ++D + ++A+     GR V CF  P     G 
Sbjct: 137 AALSTRAVREGD-EYVVRGTKAWITHGGVADFYTLMARTGEPGGRGVSCFFAP-----GE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
            +GL     + K+G   + T +L F    G   G   +     + M+I L  LDS  + +
Sbjct: 191 LDGLSAAAPERKMGLTGSVTAQLTFD---GARFGADRLIGAEGDGMRIALSALDSGRLGI 247

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V LA     EA+ YAR R   G  +I+   ++  +AD+A  + +A A         
Sbjct: 248 AACAVGLAQAALDEAVAYARGRSQFGRPIIEFQGLEFLLADMAAAVDSARA------TYL 301

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A+ R     + R  A + K  C   A  V  +A++ +GG+GY  +  + R+ RE+   
Sbjct: 302 DAARRRDRGLPFTR-QAAVAKLVCTDAAMKVTTDAVQVLGGAGYTRDFPVERYMREAKVL 360

Query: 441 SILLGS 446
            I  G+
Sbjct: 361 QIFEGT 366


>gi|24374306|ref|NP_718349.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24348850|gb|AAN55793.1|AE015716_3 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 596

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 161/371 (43%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  A+    +  + + + PK+ S E+  T             + LTE   GT
Sbjct: 125 MYPGLTHGAYSAIHAHGSEALKQKYLPKLVSGEWTGT-------------MNLTESHAGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258
           D+A + ++    +DG + ++G K F+SS   P +D  +  +LA++    EG  G   F V
Sbjct: 172 DLALLRTKAVPAADGYFAITGEKIFISSGDHPFTDNIVHLVLARLPDAPEGVKGISLFAV 231

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P++L   DGS    N L    L++K+G   N+T  + F    G L+G+ +     +  M 
Sbjct: 232 PKVLVNSDGSLGQANSLYASGLEHKMGIHGNSTCVMVFDGALGELVGEPHQGLRAMFTMM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILIDQPVMKRAIA 360
               L   +  +    ++   A+ YA+     R +SG          IL+   V +  ++
Sbjct: 292 NQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRMLLS 351

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAE 414
             A +   A AL  + A   DEA+  S+ A        A +  P+ K +          +
Sbjct: 352 QKAFN-EGARALVGQQALWLDEAERHSDPAKAKAASQLAALFTPVVKGFITNRGFNACVD 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFST 471
           A +  GG GYI E  + +  R+S    I  G+     LD++    L ++G  +  Q +ST
Sbjct: 411 AQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAM--QQWST 468

Query: 472 LEQD-LGSSGK 481
           L  + + S GK
Sbjct: 469 LVTEFIQSQGK 479


>gi|330505038|ref|YP_004381907.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919324|gb|AEB60155.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 590

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 34/311 (10%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E   T   PM +   A  + LTE   GTD+  I ++ +  +DG Y ++G K F++   
Sbjct: 144 SEELKTTYLPPMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYKVTGSKIFITGGE 203

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++         +  FLVP+++ +     G+ N +    +++K+G ++
Sbjct: 204 QDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNADGSLGARNAVSCGSIEHKMGIKA 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342
           +AT  + F    G+L+G++N     +  M     L   I  +     S   A+ YAR R 
Sbjct: 264 SATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAVSYARERI 323

Query: 343 ------------HVSGGILIDQPVMKRAIADIALD-----IAAATALSFRLANSFDEAKS 385
                        V+  I++   V +  +   AL+      A        LA   ++A  
Sbjct: 324 QSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACYVGQQLDLAKYAEDASE 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R    A   ++ P+ K +             +  GG GYI E    +  R+     I  G
Sbjct: 384 RQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEG 443

Query: 446 SGNAMVLDVLN 456
           +     LD+L 
Sbjct: 444 TNGIQALDLLG 454


>gi|262374894|ref|ZP_06068128.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309907|gb|EEY91036.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 600

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 47/324 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K 
Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPQADGSYAISGEKI 197

Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQRLKN 277
           F+S+   D       I+LA++ G       +  F+VP+  L  DGS    NG+    +++
Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNLNADGSIGERNGVRCGSIEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + F N  GFL+G  N     +        + +A+  ++    S   A+ 
Sbjct: 258 KMGIHGNATCVINFDNAKGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGSFQGALA 317

Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA+     R +SG          +I  P ++  +           AL + LA   D  + 
Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAYAEGGRALVYLLAQYADVVEH 377

Query: 386 RSEEA--AYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +EEA   +A     ++ PI K +  +         ++  GG G+I E  + +  R++  
Sbjct: 378 AAEEADRKFADNILSLLTPIAKAFLTETGSEAAKHGVQVFGGHGFISEHGMEQIVRDTRI 437

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463
             +  G+     LD+L     GT 
Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461


>gi|300692097|ref|YP_003753092.1| Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum PSI07]
 gi|299079157|emb|CBJ51825.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           PSI07]
          Length = 594

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 149/325 (45%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG Y L G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTYRLFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ + D     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFMVDEDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ + A  +A   A +    +   +  +R +  +    + P+ K W  +M+  V 
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADEPTRQQNESLYEFLVPVVKGWSTEMSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A++YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|293610792|ref|ZP_06693092.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827136|gb|EFF85501.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123637|gb|ADY83160.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 607

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/344 (20%), Positives = 148/344 (43%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++S  M  ++   T    + + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPQADGSYKITGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFMPTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+     + + +  ++A+   +A +R ++AA+           PI K +  ++     
Sbjct: 353 QKAIAEGGRSMIYYAAQIADKMTDALARGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI+E  + +  R++   ++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLIG 456


>gi|329906036|ref|ZP_08274337.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547368|gb|EGF32198.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 596

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 52/336 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  T             + LTE   GTD+  + S+ +  +DG +
Sbjct: 145 TPEQKALYLPKLVSGEWTGT-------------MCLTESHCGTDLGMLRSKAEPQADGSF 191

Query: 227 CLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNG 269
            +SG K F+S+    MS+  + L         A  +G +  F+VP+ L +     G+ N 
Sbjct: 192 KISGGKIFISAGEHDMSENIVHLVLARLPDAPAGTKG-ISLFIVPKFLPNADGSVGARNP 250

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    ++ K+G   N+T ++      G+++G  N     +  M     L   + S+    
Sbjct: 251 IFCGAIEEKMGIHGNSTCQMNMDEATGWIIGQPNKGLNAMFVMMNAARLGVGMQSLGLTE 310

Query: 330 VSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           V+   A+ YA+ R              +   +I  P ++R +           A S  +A
Sbjct: 311 VAFQNALVYAKDRLQMRSLTGVKAPEKAADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVA 370

Query: 378 NSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              D      + + R + A    ++ PI K +         +EAM+  GG G+I E  + 
Sbjct: 371 LQIDKELNHPDEEVRKDAADEVALLTPIIKSFLTDNGWIATSEAMQVYGGHGFIAEWGME 430

Query: 432 RHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++ R+S  N I  G+     LD+L    L++ G  L
Sbjct: 431 QYVRDSRINMIYEGTNTIQSLDLLGRKVLMDNGAKL 466


>gi|197099871|ref|NP_001124722.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Pongo abelii]
 gi|75062038|sp|Q5RF40|ACDSB_PONAB RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|55725671|emb|CAH89617.1| hypothetical protein [Pongo abelii]
          Length = 432

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   L D    GL   + +NK+G R+++T  L F N     + + N+     
Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPETNILGQIG 280

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
              K  I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A
Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G
Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y ++  + +++R++   +I  G+ N
Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418


>gi|312140886|ref|YP_004008222.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890225|emb|CBH49543.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 380

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E + G+D AA++ +  ++ DG + ++G K W  +   +D + + A+   +G  G  CF
Sbjct: 127 LSEPQAGSDAAALSCRATEV-DGGFRINGSKAWITNGGRADFYTLFARTSDDGARGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVP+  E     GL + + + K+G R+  T    + + F      L   TG  + + I  
Sbjct: 186 LVPKDTE-----GLGFGKPEEKMGLRAVPTTAAHYDDAF-VPTERLIGKTG--QGLPIAF 237

Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++ + V LA+     A+ YA+ R   G  +ID   +   +AD+A  + +A 
Sbjct: 238 SALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                 A   D A+ R     Y+R  A + K      A  V  +A++  GG GY ++  +
Sbjct: 298 ------ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPV 350

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I  G+
Sbjct: 351 ERYMREAKITQIFEGT 366


>gi|294341208|emb|CAZ89609.1| Acyl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 598

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 150/361 (41%), Gaps = 48/361 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252
           LTE   GTD+  I ++    +DG Y L+G K F+SS    ++D  I  +LA++    EG 
Sbjct: 167 LTEPHCGTDLGLIRTKAVPQADGSYKLTGQKIFISSGEHDLADNIIHMVLAKLPDAPEGS 226

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ +       G  NG+    +++K+G  +N+T ++   +  G+++G+ N  
Sbjct: 227 KGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   + S+    V+   A+ YAR R     ++G    D+P        
Sbjct: 287 LAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILVHP 346

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 +  RA A+    +A   +L    +    +A+ R +      ++ PI K +    
Sbjct: 347 DVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFITDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                 E ++  GG GYI E  + +  R++  N I  G+     LD+L            
Sbjct: 407 GLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG----------- 455

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIA 526
               +  D G+  +K   IL D I     ++ +  F+     LA     L    GM  +A
Sbjct: 456 --RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKAMA 513

Query: 527 D 527
           D
Sbjct: 514 D 514


>gi|30268183|emb|CAD38535.2| hypothetical protein [Homo sapiens]
          Length = 427

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 160 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 218

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   L D    GL   + +NK+G R+++T  L F N     + + N+     
Sbjct: 219 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 275

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
              K  I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A
Sbjct: 276 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYVKERIQFGKRLFDFQGLQHQVAHVA 335

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G
Sbjct: 336 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 388

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y ++  + +++R++   +I  G+ N
Sbjct: 389 YTKDYPVEKYFRDAKIGTIYEGASN 413


>gi|154244575|ref|YP_001415533.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158660|gb|ABS65876.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 585

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 44/333 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD+  + ++     DG Y ++G K F+SS   D       ++LA+      
Sbjct: 163 MALTEASAGTDLGLLNTRAVPNGDGSYAITGTKIFISSGDQDFGGNVIHLVLARLPDAPK 222

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FL P+ L   DGS    NG+    L++K+G  +  T  + +    G+L+G+ 
Sbjct: 223 GVKG-ISLFLAPKFLVHADGSLGARNGVNVGALEHKMGIHAQPTCVMNYDGATGWLVGEP 281

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRR---HVSGGI-----LID 351
                 +  M  ++  +   + + G+ ++ A   +A+ YAR R   H + G      +I+
Sbjct: 282 GRG---LNAMFTMMNAERLFVGIQGLGIAEAANQKAVAYARERLQGHGADGTPGPVAIIN 338

Query: 352 QPVMK------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P ++      RA AD A  +A  TAL   +A+   +A  R E  A   ++ P+ K    
Sbjct: 339 HPDVRKMLLTGRAFADAARALAVWTALQMDIADRHPDATVRREADALVALLTPVVKAAFT 398

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
                    + + +GG GYI E  + +  R++    I  G+     LD++   L  +G  
Sbjct: 399 DFGFETAVASQQVLGGHGYIREWGMEQFVRDARIAQIYEGTNGVQALDLVGRKLGLEGGK 458

Query: 464 LFEQLFSTLEQDLG----SSGKKVITILRDSIS 492
           L ++ F  ++ DL     S+G  ++T + ++++
Sbjct: 459 LPQRFFDLIKADLDAALPSAGAALVTPVAEALA 491


>gi|70732970|ref|YP_262743.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347269|gb|AAY94875.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 598

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 134/329 (40%), Gaps = 54/329 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  I ++    +DG Y ++G K F+S+    MS+  + L         A  
Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAVTGSKIFISAGEHDMSENIVHLVLAKLPDAPAGT 223

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L D     G  NG+    +++K+G +++AT  L F    GFL+G  N 
Sbjct: 224 KG-ISLFIVPKFLPDAAGEAGERNGVSCGSIEHKMGIKASATCVLNFDGARGFLIGQANK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILIDQ 352
               +  M     L + +  +     S   AI YA    + R ++G          +I  
Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGETSFQGAIRYANDRLQMRSLTGPKSPDKAADPIIVH 342

Query: 353 PVMKRAIADIALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCC 405
           P ++R +  +        AL++  A        S DEA+ +  E   A  + PI K +  
Sbjct: 343 PDVRRMLLTMKAFNEGNRALAYFTAQLLDVAHLSRDEAQRQDAENLLA-FLTPICKAFMT 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +    V    M+  GG G+I E  + +  R+     I  G+     LD+L          
Sbjct: 402 ETGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG--------- 452

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLC 494
                   + LGS GK ++   R     C
Sbjct: 453 -------RKVLGSQGKLLLGFTRIVHKFC 474


>gi|89269093|emb|CAJ81939.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus
           (Silurana) tropicalis]
          Length = 429

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ +  QK  D  Y ++G K W  +S  +  F+++A      G     C
Sbjct: 173 LSEAESGSDAFSLRTSAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 231

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP+  E     G    + ++K+G R+++T  L F N       +LG L         M
Sbjct: 232 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESNILGQLGHGYKYAIGM 286

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+   + +S   + LA+      I Y ++R   G  + D   M+  I+ +A  + 
Sbjct: 287 -----LNEGRIGISAQMLGLAQGCFDHTIPYTKQRVQFGKRIFDFQGMQHQISHVATQLE 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L++  A   +  +   +EA  A       KY+  ++A    ++ +E +GG GY ++
Sbjct: 342 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFSSEVACLTTSKCIEWMGGVGYTKD 394

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             I ++YR++   +I  G+ N  +  +  L+E
Sbjct: 395 YPIEKYYRDAKIGTIYEGTSNIQLSTIAKLIE 426


>gi|163761301|ref|ZP_02168376.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281458|gb|EDQ31754.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 598

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 67/416 (16%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206
           H+      S++ ++ M  P + +     I     D      + K    I  G   LTE  
Sbjct: 110 HVAVGEYMSSANLSFMMYPGLTQGAIAAIHEHGSDEQKAKYLPKMVEGIWTGTMNLTEPH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGC 255
            GTD+  + ++     DG Y +SG K F+S+    MSD  I  +LA++EG       +  
Sbjct: 170 CGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHDMSDNIIHLVLARIEGAPEGVKGISL 229

Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ +  +DGS    N +    L+ K+G   NAT  + +    G+L+G  N     + 
Sbjct: 230 FIVPKFMVGDDGSLGDRNPVSCGSLEEKMGIHGNATCVMNYDEATGYLIGAENAGLKAMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358
            M     L   +   +   ++   A+ YAR     R +SG          +I  P ++R 
Sbjct: 290 VMMNEARLGVGLQGQAMGEIAYQNAVVYARERLQGRSLSGPKAPEKKADPIIVHPDVRRT 349

Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA--PA 410
           +  I A + A       TAL   +A+  +    + E      ++ P+ K          A
Sbjct: 350 LMTIRAFNEAGRAFMLWTALKSDIAHRSEVESEKQEADDLLTLVTPVVKGVLTDKGFDHA 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V+A+ M   GG GYIEE  ++++ R++    I  G+     LD++               
Sbjct: 410 VMAQQM--FGGHGYIEEWGMSQYVRDARIAMIYEGANGIQALDLVG-------------- 453

Query: 471 TLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              + LG + G+ V+   ++    C+E++G      E++AL +      + G+ND+
Sbjct: 454 ---RKLGQNGGRAVMAFFKEIGDFCEENRG-----NEELALYTKG---LKKGLNDL 498


>gi|149915945|ref|ZP_01904469.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b]
 gi|149810268|gb|EDM70114.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b]
          Length = 598

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 30/287 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   GTD+  I ++ +   DG Y +SG K ++S+   D       ++LA++    E
Sbjct: 161 MNLTEPHCGTDLGLIRTKAEPAEDGTYRISGQKIWISAGEHDMCENIIHLVLAKLPDAPE 220

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP+ L  EDGS    N L    L+ K+G   NAT  + +    GFL+G+ +
Sbjct: 221 GTKGISLFIVPKFLVNEDGSLGARNALSCGGLEQKMGIHGNATCVMNYDGATGFLVGEPH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV----- 354
                +  M     L   +   +   V+   A+ +A    + R V+G    D+P      
Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQGEVAYQNALGFALDRLQGRDVTGTQAPDKPADPIIV 340

Query: 355 ---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409
              ++R + D    +  A A +F  A+  D      +  A     +M P+ K +      
Sbjct: 341 HPDVRRNLMDQKAFVEGARAFTFWGASLLDAGHRAGDAQAEQMVSLMTPVIKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                A + +GGSG+  E  + +  R++    I  G+     LD++ 
Sbjct: 401 ETTVLAQQTLGGSGFTREWGLEQFVRDARITMIYEGTNGIQALDLVG 447


>gi|87122133|ref|ZP_01078017.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86162680|gb|EAQ63961.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 705

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 79/344 (22%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ K   A  L +TE   G+D+  I ++  K  +G+Y + G K F+S+ M D     A+I
Sbjct: 175 PLAKNDFAACLCMTEPDAGSDVGNIRTKAVKQDNGLYRIEGEKIFISAGMHDLNDNIAYI 234

Query: 245 MLAQVEGR------VGCFLVPRLLEDGSP------------------------NGLCYQR 274
           +LA+VEG       + CF+VPR   +G                          NG+   R
Sbjct: 235 VLARVEGAKKGTVGLSCFVVPRYELEGEAKEATTPNHEERDSRLGSFIDSRLDNGVRCVR 294

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L+ K+G    AT ++ F      +G+LLG+  NV    +  M  L  + + I ++     
Sbjct: 295 LEQKMGLHGCATAQISFGQAAPCYGYLLGERENVGLKQLMTMMNLARIATGIYALGMASS 354

Query: 331 SLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATA------ 371
           +   A  YA  R + G               +I+   +KR + ++   +    A      
Sbjct: 355 AYLNAAEYAGNR-IQGTSFKEAFNPRAQRVAIIEHIDVKRMLLEMKSKVEGCRALILKLC 413

Query: 372 --------LSFRLAN--SFD-----EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAV 411
                   L+ RLAN   F+     E K + E  AY       ++ PI K +    A  V
Sbjct: 414 MHQSQLMNLNIRLANPEQFEQSPTAEDKEKIEAQAYRHQSLVNLLTPIVKAYTSDQAFHV 473

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              +++  GG GYI +  + ++ R+    S+  G+      D+ 
Sbjct: 474 AETSIQVYGGHGYISDNPVEQYARDIKVMSLWEGTNFVQSADLF 517


>gi|21326612|gb|AAL03980.1| acyl-CoA dehydrogenase [Azospirillum brasilense]
          Length = 596

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 62/359 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   GTD+  I ++     DG + ++G K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGLIRTKAVPQEDGSHKITGTKIFISAGEHDLTENILHLVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    NG+    +++K+G +++AT  + F +  G+L+G+    
Sbjct: 224 RGISLFLVPKFLPKEDGSVGPRNGVACGSIEHKMGIKASATCVMNFEDATGWLVGE---- 279

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQP-- 353
             P + M+ + + +++A ++V    + +AE     A+ YA+     R + G    D+P  
Sbjct: 280 --PHKGMRAMFVMMNAARLAVGIQGLGVAEVSYQNAVAYAKERLQGRSLKGTAHPDKPAD 337

Query: 354 ------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
                       +  RA  + A  + A       +A    + K+R E   + ++M PI K
Sbjct: 338 PIIVHPDVRRNLLTARAYTEGARALGALVGYKLDVAEKHADEKTRKEADEFVQLMTPIVK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
                +       A++  GG G+I E  + ++ R++    I  G+     LD++      
Sbjct: 398 ALFTDIGFESANIAVQVHGGHGFIWETGVEQYVRDARICQIYEGTNGIQALDLVG----- 452

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                     L QD+G   ++    +   I    E + LA F+   + LA + A L +A
Sbjct: 453 --------RKLPQDMGRLLRRFFHPVGAEIEADMEREELAEFV---LPLAKAFAKLQQA 500


>gi|300773910|ref|ZP_07083779.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760081|gb|EFK56908.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 389

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 40/308 (12%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           SA ++  M+ P + K +A +   + Y     A    ++VAI    TE   G+DI  I + 
Sbjct: 88  SALVIQYMSAPYLLK-YASEELKQRYLTGVIAGDLVSAVAI----TEPGAGSDIQHIKTT 142

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G K F+++    D FI   + +       +  LL D +  G+   ++ 
Sbjct: 143 AVREGD-YYIVNGSKTFITNGYYGDFFITAVKTDPSKKSKGISLLLIDRNTPGVSAHKI- 200

Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           NK+G  ++ T EL F                 FG+L+G L +             L +AI
Sbjct: 201 NKMGWHASDTAELGFDQVKVPVSHLIGEEGAGFGYLMGGLQLER-----------LTAAI 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+S    +L   + Y  +R   G  L+D  V++  IA +  DIA   A  +   +    
Sbjct: 250 QSISTADSALQYTLAYIDKREAFGKKLMDFQVLRHRIAQMVADIATTKAFVYHCCD---- 305

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +   YA     I K    ++A  ++ E ++  GG G+ E+  I+R YR+    +I
Sbjct: 306 ---LQQRGDYAVQECSIAKLQSSELAIKIVHECLQLFGGYGFTEDYKISRLYRDVRVGTI 362

Query: 443 LLGSGNAM 450
           + G+   M
Sbjct: 363 IGGTSEIM 370


>gi|260222964|emb|CBA33057.1| hypothetical protein Csp_B17130 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 824

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 44/277 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITWGEHDMAENIVHLVLARVSGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F+VP+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G
Sbjct: 221 GVKGISLFVVPKFMVNKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILID 351
             N     +E M   I +++A   V    +++AE     A+ +++     R V G     
Sbjct: 281 QENRG---LEYM--FIMMNAARYGVGVQGIAIAERAYQKAVQFSKDRVQSRPVDGSTPGS 335

Query: 352 QPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            P++            RA  +    +A+  A ++  A+   +A++R +  A+   M P+ 
Sbjct: 336 APIIHHPDVRRMLMTMRAYTEGCRALASVAASAYDAAHHHTDAEARKQNQAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           K +  +M+  V +  ++  GG G+IEE   A++YR++
Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|302419223|ref|XP_003007442.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261353093|gb|EEY15521.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 435

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++ +  +K+ DG Y ++G K W  + P +D  ++ A+ E   G   +
Sbjct: 170 LAMSESGAGSDVVSMRTTAKKV-DGGYLINGSKMWITNGPDADVIVVYAKTEPDAGSKGI 228

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E  + +G   QR  +K+G R + T EL F   F     +LG+LN   G V  +  
Sbjct: 229 TAFIVETKTSDGFSCQRKLDKMGMRGSNTGELSFDAVFVPDDRVLGNLN---GGVRVLME 285

Query: 315 LIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + L+  ++S      M+ +L   + +A +R   G  +    +++  +AD+   + A+ A
Sbjct: 286 GLDLERLVLSAGPLGIMQAALDVTLPFAHQRKQFGQPIAHNQLVQGKLADMYTKLQASRA 345

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++  A + DEA + R+++ A A +       +  + A     + ++ +GG GY+EE   
Sbjct: 346 YTYATARTVDEAGTIRTQDCAGAIL-------YAAERATECTLDCIQLLGGMGYVEEMPA 398

Query: 431 ARHYRESPANSILLGS 446
           +R  R++    I  G+
Sbjct: 399 SRLLRDAKLYEIGAGT 414


>gi|146280706|ref|YP_001170859.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145568911|gb|ABP78017.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 596

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ +  +DG Y +SG K F+S     MS+  + L         A V
Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +   LVP+ +   DG+P   N L    +++K+G +  AT  + F    G+++G+ N 
Sbjct: 222 KG-ISLLLVPKFIANADGTPGARNALSCGAIEHKMGIKGAATCVMNFDGATGWIVGEPNQ 280

Query: 305 STG----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------- 353
                   + D +  + L    ++    + SLA A    + R ++G    D+P       
Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARERLQSRGLAGAQRPDKPADPIIVH 340

Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                  + ++ + + +  +AA  A    L +   E   R   +  A ++ PI K +   
Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEPSYRKAASKRAALLIPIVKAFFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M   V +  ++  GG GYI E  + +  R+S    +  G+     LD +
Sbjct: 401 MGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449


>gi|89093403|ref|ZP_01166352.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89082382|gb|EAR61605.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 590

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 57/353 (16%)

Query: 149 GHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G  + P ++  ++ AL+   +  +   + P++ S E+  T             + LTE  
Sbjct: 122 GFGLCPLLSQGAVEALIAHGSDELKTQYLPQLISGEWTGT-------------MNLTEPN 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVG 254
            G+D+AA++++     D  Y +SG K F++     M+   + L         A V+G + 
Sbjct: 169 AGSDLAAVSAKAMPDGD-TYKISGQKIFITWGDHQMASNIVHLVLARLPDAPAGVKG-IS 226

Query: 255 CFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
            F+VP+ L  E G P   N +    L++K+G   + T  + F +     G+L+G+ N   
Sbjct: 227 LFIVPKYLLDEQGQPGALNDVSCVSLEHKLGIHGSPTCVMSFGDNGGATGYLIGEPNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGGILIDQPVM 355
                  +   ++ A  SV    +S++E     A+ Y++ R        S   +I+ P +
Sbjct: 287 S-----YMFTMMNHARQSVGLQGLSISERAYQQALEYSQERLQGSNPDGSKIAIINHPDV 341

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +R +  +     A  AL+   A   D      +E      +  PI K W  ++A  + + 
Sbjct: 342 RRMLMAMKSGNEAMRALALSAAADIDRTHHGDAESKTRVELYTPIVKGWMTELAQEITSL 401

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL 464
            ++  GG G+IEE   A+HYR++    I  G+     LD++    L +KG  L
Sbjct: 402 NIQVHGGMGFIEETGAAQHYRDARILPIYEGTTGIQALDLIGRKTLFDKGAAL 454


>gi|127512889|ref|YP_001094086.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638184|gb|ABO23827.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 583

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 34/295 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++     DG Y +SG K F++    D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRNIRTKAIPQDDGSYLISGSKIFITGGDHDLTENVIHLVLAKLPDSNG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  NG+    +++K+G + +AT  + F +  G+L+G  N   G
Sbjct: 224 ISLFLVPKIKVDDNGELGETNGVTVGSIEHKMGLKGSATCVMNFDDAQGYLIGKAN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRR---HVSGG-------ILIDQPV 354
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG       IL+   V
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERLQGQAAGGSDNASDPILVHGDV 340

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWCCKMAP 409
            +R +  I     A  ALS       D AK    E     A Y  ++ P+ K +      
Sbjct: 341 -RRMLMTIRCYTEAGRALSVFTGQQLDLAKHAEGEVQEKAARYVGLLTPVAKAFLSDRGL 399

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                A +  GG GYI E  I +  R++    I  G+     +D L     G +L
Sbjct: 400 DAAVMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAVDFLGRKTTGDDL 454


>gi|332978383|gb|EGK15105.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 597

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 52/339 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 164 LTEAHAGSDLGIIRTKAEPNDDGSYSITGQKIFISAGEHDMTDNIVHIVLARLPGAPAGT 223

Query: 253 --VGCFLVPRL--LEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP++    DGS   PN +    +++K+G +++AT  + F    GFL+G  N  
Sbjct: 224 KGISLFIVPKINVNADGSLAEPNQVTCGSIEHKMGIKASATCVMNFDGAKGFLIGPENRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353
              +     +  + +AI  ++   ++   ++ YA+     R +SG    D+        P
Sbjct: 284 LQCMFTFMNVARIGTAIQGLTASEIAFQGSLEYAKDRLAMRSMSGAKAPDKVADPIIVHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA----RIMAPITKYWCCKMA 408
            ++  +           AL++ L+   D   K   EE  YA     ++ PI K +  +  
Sbjct: 344 AVRNMLLTEKAFAEGGRALAYYLSFFADVVVKGTGEEQEYADQMLSLLTPIAKAFLTETG 403

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                  ++  GG G+I E  + ++ R++    +  G+     LD+L             
Sbjct: 404 YESANHGVQVYGGHGFIREWGMEQNVRDTRIACLYEGTTEIQSLDLLG------------ 451

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKE---DKGLARFL 504
                + LGS GK +    +     CKE   D+ +  F+
Sbjct: 452 ----RKVLGSQGKMLANFTKVINDFCKEHESDESMGEFI 486


>gi|117920429|ref|YP_869621.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612761|gb|ABK48215.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 585

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 41/326 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK++S E+             A  + +TE + G+D+  I ++     DG Y
Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274
            +SG K F++    D       ++LA++    G   FLVP+   +     G  NG+    
Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVSVGS 250

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  + F    G+L+G+ N     +  M     L   I  +   + +   
Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310

Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
           A  YA+ R+    +GG         +I    ++R +  I     A  ALS       D  
Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLA 370

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              E + +++ A Y  ++ P+ K +           A +  GG GYI E  I +  R++ 
Sbjct: 371 KYAEGEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+     +D L     G NL
Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|86356210|ref|YP_468102.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86280312|gb|ABC89375.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 598

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 37/343 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206
           H      TSA+ ++LM  P + +     I    ++E   T    M   S +  + LTE  
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGTMNLTEPH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255
            GTD+  + ++    +DG Y +SG K F+S+   D       ++LA++EG       +  
Sbjct: 170 CGTDLGMLRTRAVPQADGSYKISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISL 229

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ L       G+ N +    +++K+G   NAT  + +    GFL+G  N     + 
Sbjct: 230 FIVPKFLVGKDGALGARNAVTCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358
            M     L   +  ++   ++   A +YAR     R +SG          +I  P ++R+
Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGVKAPDKKADPIIVHPDIRRS 349

Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  I A + A       TAL   +A+   + K R        ++ PI K           
Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPILKGVMTDRGFDHA 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             A +  GG GYIEE  ++++ R++    I  G+     LD++
Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 452


>gi|325675476|ref|ZP_08155160.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553447|gb|EGD23125.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 380

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 33/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E + G+D AA++ +  ++ DG + ++G K W  +   +D + + A+   +G  G  CF
Sbjct: 127 LSEPQAGSDAAALSCRATEV-DGGFRINGSKAWITNGGRADFYTLFARTSDDGARGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           LVP+  E     GL + + + K+G R+  T    + + F     L+G     TG  + + 
Sbjct: 186 LVPKDTE-----GLNFGKPEEKMGLRAVPTTAAHYDDAFVPAERLIG----KTG--QGLP 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I    LDS  + ++ + V LA+     A+ YA+ R   G  +ID   +   +AD+A  + 
Sbjct: 235 IAFSALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVD 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A       A   D A+ R     Y+R  A + K      A  V  +A++  GG GY ++
Sbjct: 295 SAR------ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQD 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ RE+    I  G+
Sbjct: 348 FPVERYMREAKITQIFEGT 366


>gi|327478975|gb|AEA82285.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 596

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ +  +DG Y +SG K F+S     MS+  + L         A V
Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +   LVP+ +   DG+P   N L    +++K+G +  AT  + F    G+++G+ N 
Sbjct: 222 KG-ISLLLVPKFIANADGTPGARNALSCGAIEHKMGIKGAATCVMNFDGATGWIVGEPNQ 280

Query: 305 STG----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------- 353
                   + D +  + L    ++    + SLA A    + R ++G    D+P       
Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARERLQSRGLAGAQHPDKPADPIIVH 340

Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                  + ++ + + +  +AA  A    L +   E   R   +  A ++ PI K +   
Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEPSYRKAASKRAALLIPIVKAFFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M   V +  ++  GG GYI E  + +  R+S    +  G+     LD +
Sbjct: 401 MGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449


>gi|312110767|ref|YP_003989083.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311215868|gb|ADP74472.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 380

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     +    + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYSRQVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V G+   G  ++  ++      G   +   +K+G R++ T EL F N     +   NV  
Sbjct: 171 VTGKDERGKNIISAIIVPTDAPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K  ++ LD   +S++ + V +A+A     + YA+ R   G  +     ++  +A
Sbjct: 228 DPKKGFKQFLHTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C        +A++  G
Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GY++E  + RH R+
Sbjct: 341 GYGYMKEYGVERHLRD 356


>gi|90021530|ref|YP_527357.1| putative acyl-CoA dehydrogenase [Saccharophagus degradans 2-40]
 gi|89951130|gb|ABD81145.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40]
          Length = 595

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ ++  DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 165 LTEAHCGTDLGMLRTKAEQNEDGSYSISGTKIFISAGEHDLAENIVHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  +DGS    N +    L+ K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKFLPSDDGSVGERNQVACGSLEEKMGIHGNATCVMNFDGAKGYLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSG--------GILIDQP 353
              +        L +A+  ++    G + SLA A    + R +SG          +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAELGYQKSLAYAKDRIQMRALSGVKNPDGPADPIICHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407
            ++R +            L + LA   D    A++ +++AA + ++A   PI K +  + 
Sbjct: 345 DVRRMLLTQKAFAEGGRMLIYFLAKQVDIESHAQNEADKAAASDMLALLTPIAKAFLTET 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  A++C GG GYI E    ++ R++  + +  G+     LD+L
Sbjct: 405 GFESANLAVQCFGGHGYIREWGAEQNVRDARISMLYEGTTGIQALDLL 452


>gi|254284206|ref|ZP_04959174.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
 gi|219680409|gb|EED36758.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
          Length = 602

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 59/329 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P++ S E+  T             + L+E   G+ ++ IT++    SDG Y L G K 
Sbjct: 149 WVPRLRSGEFAGT-------------MALSEPHAGSSLSDITTKAVLQSDGSYRLYGSKI 195

Query: 234 FLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLLEDGSP-----NGLCYQRLKN 277
           ++S     +S   +  +LA++EG       +  F+ P+ L D S      N +    L +
Sbjct: 196 WISGGDQELSSNIVHAVLARIEGAPPGVPGISLFICPKFLLDESGQVSRRNDVHLTGLFH 255

Query: 278 KIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRV 330
           K+G R + +  L F    G   FL+G  N   G +  M    ++++ + +A ++++G + 
Sbjct: 256 KMGGRGHTSTALNFGEREGAVAFLVGQPNAGLGYMFHMMNEARVMVGMMAATLALTGFQY 315

Query: 331 SLAEAIHYARRRH----------VSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANS 379
               A+ YAR R           +S  + LID   ++R +         A +L    +  
Sbjct: 316 ----ALWYARERTQGRLPSNKNPLSAPVALIDHADVRRMLLAQKAYAEGAFSLCLFASQL 371

Query: 380 FDEAKSR--SEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+A++   SE+  +A      + PI K +  +  P     A++ +GG+GY +E  +   
Sbjct: 372 VDDARTHPDSEQREWAHDLLDFLTPIVKTFPSEFGPRANDLAIQVLGGAGYTDEHPVEMM 431

Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEK 460
           YR++  N I  G+     LD+L   L EK
Sbjct: 432 YRDNRLNPIHEGTTGIQALDLLGRKLTEK 460


>gi|313499828|gb|ADR61194.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 591

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 31/284 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ Q  +DG Y ++G K F+S     ++D  + L         A V
Sbjct: 162 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307
            G +  FLVP+LL  G  N L    L++K+G +  +T  + F    G+L+G++N      
Sbjct: 222 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEVNQGLACM 280

Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353
              + D +  + L    ++ +  +  LA A    + R ++G +  ++P            
Sbjct: 281 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 340

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + ++ + +    +   TA    L ++   A +R   A  A ++ PI K +   +   V
Sbjct: 341 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 400

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  ++  GG GYI E  + +  R+S    +  G+     LD++
Sbjct: 401 ASLGVQLYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 444


>gi|330872314|gb|EGH06463.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 592

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    ++NK+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIENKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|15559225|gb|AAH13756.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|312150506|gb|ADQ31765.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic
           construct]
          Length = 432

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   L D    GL   + +NK+G R+++T  L F N     + + N+     
Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
              K  I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A
Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G
Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y ++  + +++R++   +I  G+ N
Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418


>gi|212532319|ref|XP_002146316.1| electron transport oxidoreductase, putative [Penicillium marneffei
           ATCC 18224]
 gi|210071680|gb|EEA25769.1| electron transport oxidoreductase, putative [Penicillium marneffei
           ATCC 18224]
          Length = 687

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 44/302 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQG--------QKISD------GIYCLSGHKWFLSSPMSDAFI 244
           GL +TE+ GG+D+    +           K +D      G + L+G KWF +S      I
Sbjct: 266 GLWMTERAGGSDLTPTETTATYSPLGPDDKSTDADGFPLGPWVLNGLKWFSTSTEGSMAI 325

Query: 245 MLAQVEGRVGCFLVPR---LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            +A+    +  F VP    +  +G P    NG+  +RLKNK+G +   T ELE S   G+
Sbjct: 326 AVARTPIGLSAFYVPMRRAVTVNGVPSVELNGVRIRRLKNKMGTKGLPTGELELSGMRGY 385

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMK 356
           L+G        +  +  +  +  A++SV      L+ A  +AR R V+ G  L   P+  
Sbjct: 386 LIGKEGKGVNEIGVVLNITRIHLAMVSVGYAARGLSIARAFARVRKVARGTQLSSVPLHM 445

Query: 357 RAIADIALDIAAATALSFRLA-------------NSFDEAKSRSEEAAYARIMAPITKYW 403
           + +A   +   A  AL   +A             N F  A ++ +  A  R++  + K  
Sbjct: 446 KTLAKAHVTYRAHLALCMFIAALLGRTEQPKASLNDFVPANAQ-DAGALLRLLGSVAKAT 504

Query: 404 CCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL--DVLNL 457
                  V+  +ME +GG GY+E      ++AR  R+  A  IL+G G   V+  DV+ +
Sbjct: 505 ATMDCVGVLQCSMESLGGVGYLENDEAGFNVARVLRDCTA--ILIGEGTTDVIATDVVKV 562

Query: 458 LE 459
           L+
Sbjct: 563 LK 564


>gi|330501353|ref|YP_004378222.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915639|gb|AEB56470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 596

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ +  +DG Y +SG K F+S     +S+  I L         A V
Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYRVSGSKIFISGGEQDLSENIIHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +   LVP+ +   DG+P   N L    +++K+G +  +T  + F    G+L+G+ N 
Sbjct: 222 KG-ISLLLVPKFIAAADGTPGERNSLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQ 280

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQ 352
               +  M         +  +     +   A+ YAR R  S G+            +I+ 
Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPEKPADPIINH 340

Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R       + + +  +AA TA    L +  + A++R      A ++ PI K +   
Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYTARQLDLEHGAESAEARKAAGKRAALLIPIVKAFFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M   V +  ++  GG G+I E  + +  R+S    +  G+     LD +
Sbjct: 401 MGQEVASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449


>gi|256375705|ref|YP_003099365.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255920008|gb|ACU35519.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 383

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 47/266 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCF 256
           LTE   G+D  ++ +   +++ G + LSG K F+++   +D  ++ A+  G     V  F
Sbjct: 125 LTEPDTGSDAGSLAASATRVAGG-WRLSGRKVFITNGTWADVALVFARTGGPGPRGVTAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           LVP      SP G   + ++ K+G R  AT EL        LL D+     PV D  +L 
Sbjct: 184 LVP----TDSP-GFTAREIRGKLGMRGQATAEL--------LLDDV-----PVPDDALLG 225

Query: 316 ----------IYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                       LD   MSV+       R SL  A+ YAR R   G  +    +++  +A
Sbjct: 226 EEGGGFALAMAALDRGRMSVAAGCVGAARGSLEAALRYAREREQFGRPIAGFQLVQELLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++  AA  L++R A+  D  +    EA+ A       K +  + +  V   A++ +G
Sbjct: 286 DMAVETDAARLLTWRCADLADRGEPFRTEASMA-------KLYASEASVRVADRAVQVLG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+++  +A+H R++   ++  G+
Sbjct: 339 GYGYLDDHPVAKHLRDTRVTTLYEGT 364


>gi|158293343|ref|XP_314701.4| AGAP008602-PA [Anopheles gambiae str. PEST]
 gi|157016659|gb|EAA10182.4| AGAP008602-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 24/258 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D+AA+T++  + +DG + L+G K W  S   S A I+ A V+       +
Sbjct: 154 FALSEAGAGSDVAAMTTRATRDADGSWILNGTKAWVTSGIESVAAIVFATVDPALKYKGI 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLV    + G+  G+   R ++K+G R  +T +L   N     + + NV       M+
Sbjct: 214 TAFLVD--FDSGALAGVHRGRPEDKLGIRGTSTCDLMLENV---RVPEANVLGTVGSGMR 268

Query: 314 ILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD A + ++   + + +A     + YA++R   GG LID P ++  IA++   + 
Sbjct: 269 IAMEQLDRARIGIASQAIGIGQAALETAVEYAKQRTAFGGTLIDLPAVRTRIAEMGTRLE 328

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L  + A   D     ++  + A+ +A  T  +       +       +GG GY++ 
Sbjct: 329 MARLLVRKAAGEIDRGLRATKACSMAKWIAGETATYAAHGCQQI-------LGGMGYVKS 381

Query: 428 RSIARHYRESPANSILLG 445
               R+YR++    I  G
Sbjct: 382 LPAERYYRDARITEIYGG 399


>gi|170702384|ref|ZP_02893274.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132698|gb|EDT01136.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 596

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            +   + + GK
Sbjct: 468 EIGDTVAALGK 478


>gi|86135909|ref|ZP_01054488.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826783|gb|EAQ46979.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 580

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 43/275 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+A + S+ +  ++G Y +SG K F++     MS+  + L         A
Sbjct: 152 MNLTEPQAGSDLALVRSRAEAQANGTYKISGTKIFITYGEHDMSENTVHLVLARTPDAPA 211

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+ + +     G+ N +    +++K+G +++ T  L+F    GFL+G+ 
Sbjct: 212 GVKG-ISLFLVPKYMVNADGSLGARNSVICPSVEHKLGIKASPTAVLQFEEATGFLIGEE 270

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------- 348
           N     + +M     ++SA  +V    +++ E     A+ +A+ R  S  +         
Sbjct: 271 NAGLTYMFEM-----MNSARYAVGLQGIAVGERAYQQALAFAKERVQSAPVDGSTREAVT 325

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKY 402
           ++  P ++R +  + +    A  ++   A   D A+      +++E  A +  + P+ K 
Sbjct: 326 IVHHPDVRRMLMRMRVLTEGARGMAMFAAGCQDMARNAPTPDAQTEAKALSEFLTPLVKG 385

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  +    V +  ++  GG G+IEE   A+HYR++
Sbjct: 386 FSTENGVEVASLGVQVHGGMGFIEETGAAQHYRDA 420


>gi|262370610|ref|ZP_06063935.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314410|gb|EEY95452.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 607

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 37/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPQCGTDLGQVKTKAELNADGTYNISGTKIFISAGEQDLTENIIHIVLARLPDAPTGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  N +    +++K+G R++AT  L F N  G+L+G+ N  
Sbjct: 225 KGISLFIVPKFLVNADSSLGERNPVTCGSIEHKMGIRASATAVLNFDNAVGYLIGEPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +AI  ++   +S   A+ YA+ R              V+  I+   
Sbjct: 285 LHAMFTFMNTARIGTAIQGIAHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344

Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
            V +  +   A+     + + +  ++A+   +A  R + AA+           PI K + 
Sbjct: 345 DVRRMLLTQKAIAEGGRSMIYYAAQIADKMADALERGDTAAFEAHDDHLGFYTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            ++        M+  GG GYI+E  + +  R++   ++  G+     LD++
Sbjct: 405 TELGLEAANHGMQVYGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLI 455


>gi|255319399|ref|ZP_05360615.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255303535|gb|EET82736.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 593

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 53/372 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITGTKI 196

Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++     +SD  I L       A    R +  F+VP+ L  EDGS    N +    +++
Sbjct: 197 FITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    GF++G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQNAAQ 316

Query: 338 YARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YA  R              V+  IL+   V +R + ++  +  A+ A +  +    D  K
Sbjct: 317 YATDRIQGRSASGIKSPNKVADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++  A  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCK 495
              I  G+      D++   L++      E+  + + +D  ++    +  ++D ++    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEK 507
           + + ++RF+ E+
Sbjct: 495 DIEAVSRFIIEQ 506


>gi|78223474|ref|YP_385221.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194729|gb|ABB32496.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 615

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 168/404 (41%), Gaps = 70/404 (17%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A ++    +    K +  K+F+ E+  T             + LTE   G+++ A+ + 
Sbjct: 133 AAKVIEAYGSEEQKKSYMTKLFAGEWMGT-------------MCLTEPDAGSEVGAVQTV 179

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS 266
             +  DG Y ++G K F+++   D       ++LA+V G       +  F+VP+ L DG 
Sbjct: 180 ATRNGDGSYAITGTKIFITAGEHDLAGNIIHMVLARVAGDPPGTKGLSLFIVPKFLPDGV 239

Query: 267 PNG-----LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMKI 314
            N      +    +++K+G     T  + F ++    G+LLG+       +     + ++
Sbjct: 240 GNAGERNDVYCTGIEHKMGLHGLVTCTMAFGDSGKCTGYLLGEQGKGMAEMFHMMNEQRL 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIA 363
           L+ ++    S S    +   A+ Y + R     +           +I+ P +KR +  + 
Sbjct: 300 LVGVEGLSFSTS----AFMNAVDYTKSRVQGLSVYPGADKQKSVAIINHPDVKRMLLTMK 355

Query: 364 LDIAAATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
             +    +L++  ++  D A       R+       ++ PI K +    A  V A AM+C
Sbjct: 356 AYVEGCRSLAYFTSSCMDNAGVADGADRARWQGLVELLTPIVKAYITDNAWTVTALAMQC 415

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLFEQLFSTL 472
            GG GY  +    R  R+    +I  G+     +D++      N      NL E +  T+
Sbjct: 416 AGGYGYCSDYPFERLARDCKVTTIFEGTNGIQAMDLMFRKILGNNRVNFNNLLEMIDQTI 475

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
           E+    +    I++    +   +E  GLAR + E   +A+S+AA
Sbjct: 476 EK---GAADAEISVYAAIVKRARE--GLARIVEE---MAASSAA 511


>gi|4501859|ref|NP_001600.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Homo sapiens]
 gi|1168283|sp|P45954|ACDSB_HUMAN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|531391|gb|AAA74424.1| acyl-CoA dehydrogenase [Homo sapiens]
 gi|9739137|gb|AAF97921.1| short/branched chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|55859559|emb|CAI10847.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|119569676|gb|EAW49291.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|189054383|dbj|BAG36909.1| unnamed protein product [Homo sapiens]
 gi|261858534|dbj|BAI45789.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic
           construct]
          Length = 432

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   L D    GL   + +NK+G R+++T  L F N     + + N+     
Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
              K  I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A
Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G
Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y ++  + +++R++   +I  G+ N
Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418


>gi|329896907|ref|ZP_08271760.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328921534|gb|EGG28917.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 390

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 36/292 (12%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P V    APK+ + E               I LG+TE  GG+D+A++ +  ++  D  Y 
Sbjct: 116 PEVKAAVAPKVLAGE-------------AWISLGITEPGGGSDVASLQTTARRDGDE-YV 161

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +SG K F++  M   ++  A   G  G   V  LL      G     L  K G  ++ T 
Sbjct: 162 VSGSKTFITGGMRANWVSTAVRTGGPGPGGVSMLLIPTDAAGFSRTPLNKKQGWWASDTA 221

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEAIHY 338
            L F         L+G+ N      +  K++++  +S  M ++       RV L +A+++
Sbjct: 222 TLYFDEVRVPVTNLIGEEN------QGFKVIMHNFNSERMGMAAQMEAAARVCLEDAVNW 275

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  L D  V++  I+ +   + A  A         +  +  + + A  ++ A 
Sbjct: 276 ARERKTFGKRLADHQVIRHKISAMKQKLNATQAYIRACYEQIEIGQPNAADIALLKVQAS 335

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               +C +       EAM+ +GG+GY+    + R YRE   N+I  GS   M
Sbjct: 336 EVMEFCAR-------EAMQILGGAGYLRGNRVERIYREVRVNAIGGGSEEIM 380


>gi|319763044|ref|YP_004126981.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825124|ref|YP_004388427.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117605|gb|ADV00094.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310496|gb|AEB84911.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 596

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 160/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ S ++  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDALKATYLEKLISGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ +  +DG Y L G K F++    D       ++LA+V G       +  F+V
Sbjct: 171 DLALVRTRAEPQADGTYKLFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +   DGS    N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 231 PKFMVHADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKR- 357
            M I++      + V G+ V+     +A+ YA+     R V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVQYAKDRVQSRPVDGSVAGSAAIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A  +    +A+  A ++  A+   +A+ R + AA+   M P+ K +  +M+  V 
Sbjct: 348 LMTMRAYTEGCRGMASVAAAAYDAAHHHPDAQVRKDNAAFYEFMVPLVKGYSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441


>gi|146284172|ref|YP_001174325.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572377|gb|ABP81483.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 619

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 36/290 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y L+G K F+SS   D       I+LA++       
Sbjct: 183 LTEPHCGTDLGMLRTKAEPQADGSYKLNGTKIFISSGEHDMAENIVHIVLARLPDAPAGT 242

Query: 253 --VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L     E G  NG+    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 243 KGISLFIVPKFLPNAEGEAGERNGVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKG 302

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+    I YAR R              +   +I  P
Sbjct: 303 LNCMFTFMNTARLGTALQGLAHAEVAFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 362

Query: 354 VMKRAIADIALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCCK 406
            ++R +  +        A+ +  A        S DE + ++ +A  A  + PI K +  +
Sbjct: 363 DVRRMLLTMKAFAEGNRAMLYFAAKQVDVMQRSQDEEQRKAADAMLA-FLTPIAKAFMTE 421

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +        ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 422 VGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISCLYEGTTGIQALDLLG 471


>gi|158520643|ref|YP_001528513.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509469|gb|ABW66436.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 386

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 11/262 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE  GG+D+A + +   +  D  Y ++G K F++S +    +  A   G  G   + 
Sbjct: 131 LGITEPGGGSDVANLQTTAVRDGDD-YIVNGSKTFITSGIRADQLTCAVRTGDKGAHGIS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R   K+G  ++ T E+ F N        +G+ N     + +   + 
Sbjct: 190 FLVIEADTPGYATGRKLEKMGWLASDTGEIFFDNCRVPVANRIGEENSGFYTIMENFQME 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L   +M+    +++L E+I YA++R   G  L    V +  + D+A  + A+   ++R+
Sbjct: 250 RLHLCVMANMTAQLALEESIKYAKQRQAFGKPLKGFQVTRHKLVDMATLVEASREFTYRV 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +++ +E + A       K + C+++  V  +A++  GG GY++E  + R YR+
Sbjct: 310 AAKMNAGQNQVKEISMA-------KNFACQVSDKVTYDAVQIFGGYGYMKEYMVERLYRD 362

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +   SI  G+   M   + N +
Sbjct: 363 NRILSIGGGTTEIMKEIIANFV 384


>gi|301064561|ref|ZP_07204957.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300441309|gb|EFK05678.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 377

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 24/262 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           LTE   G+D+  +++  QK   G Y L+G K W  + P++D + +L Q + +     +  
Sbjct: 123 LTEPEAGSDLGNVSTLAQKTDSG-YRLNGMKTWVTNGPVADFYTVLMQTDPKKKFRGLNF 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F VPR    G+P G    +  + +G R+    E+ F +       +LG        +  +
Sbjct: 182 FFVPR----GTP-GFSNSKAFDLLGTRTTPISEIAFKDCLVPHHHMLGAEGRGLSNLLSI 236

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              I   +A +++   R ++ ++I YAR R   G  +    +++  +A++A+D+ A+  +
Sbjct: 237 LAEIRTMTAALAIGLQRAAMNDSIQYARERVQFGQTISKYQLIQAKVANMAVDLEASRLM 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +++  +  DE K    E++ A       KY+  + A      A   +G   Y  E +  R
Sbjct: 297 TYKATHMIDEKKEALTESSMA-------KYFATEAACRAADHATRILGAYAYSMEYAAQR 349

Query: 433 HYRESPANSILLGSGNAMVLDV 454
           +YR++    +L G G+  +L  
Sbjct: 350 YYRDN--RFLLYGGGSHEILQT 369


>gi|124009115|ref|ZP_01693798.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123985329|gb|EAY25249.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 384

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 51/300 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
           K W PK+ + E+              IG  GLTE   G+D   + +    + DG  + L+
Sbjct: 112 KRWLPKLATGEW--------------IGAWGLTEPNTGSDAGNMRTTA--VLDGNEWVLN 155

Query: 230 GHKWFLSSPMS-DAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K F++  +S +  +++A+       G    F+V R        G    + +NK+G R+
Sbjct: 156 GAKNFITHGISGNIAVVVARTGEPNESGNASAFVVER-----GTMGFAGGKKENKLGMRA 210

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+ F N       +LG  NV  G  + + IL   D   +S+S + + +AE     A
Sbjct: 211 SETAEMIFDNCRIPKENILG--NVGDGFRQALAIL---DGGRISISALSIGIAEGAYEAA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  + +   +   +AD+A +I AA  L+ R ++  D  K   +E+A A  
Sbjct: 266 LQYAKERQQFGQSIANFQGISFKLADMATEIDAAKLLTERASDLKDAGKKVGKESAMA-- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KY+  ++A  V  EA++  GG GY+++  + + YR+S   +I  G G + +  V+
Sbjct: 324 -----KYYSSEVAVRVSNEAVQIFGGYGYVKDFPVEKFYRDSKLCTI--GEGTSEIQKVV 376


>gi|126666970|ref|ZP_01737946.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
 gi|126628686|gb|EAZ99307.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
          Length = 599

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 39/310 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++ +   DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEAHCGSDLGTLRTKAEPNMDGSYSITGTKIFISAGEHDLTDNIVHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  +DGS    N L    +++K+G  +NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFVVPKCLPAQDGSAGERNALSCGSIEHKMGIHANATCLMNFDGAKGWLIGAENKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LIDQP 353
              +     +  + +AI  +    + L  ++ YA+ R     +SG          +I  P
Sbjct: 285 LNAMFTFMNVARIGTAIQGLGAAELGLQGSVAYAKDRLAMRALSGAKNPDSYADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR-----IMAPITKYWCCKM 407
            ++R +         A AL +  A   D  +S ++EE   A       + PI K +  ++
Sbjct: 345 DVRRMLLTQKAIAEGARALIYMTAQKADIVQSGKTEEERKAADELLGFLTPIAKAFLTEI 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                +  M+  GG GY+ E  + ++ R++    I  G+     LD+L    L+ +G +L
Sbjct: 405 GYESASLGMQVFGGHGYVSEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 464

Query: 465 --FEQLFSTL 472
             F +L  T 
Sbjct: 465 KGFTKLVHTF 474


>gi|91088951|ref|XP_973830.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Tribolium castaneum]
 gi|270011559|gb|EFA08007.1| hypothetical protein TcasGA2_TC005596 [Tribolium castaneum]
          Length = 405

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
             L+E   G+D+ A+++    ++DG  + L+G K W  S P+  A I+ A V+ +     
Sbjct: 145 FALSEPDAGSDVGAMSTTA--VADGDCFVLNGTKSWVTSGPVGKAAIVFATVDKQLRHKG 202

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F+VP L  DG   G    + ++K+G R++ T  L   N       ++GD  V  G V
Sbjct: 203 ITAFIVP-LPSDGVTLG----KKEDKLGIRASPTCNLIMDNVRVPKSNVIGD--VGDGFV 255

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             M     LD A + ++   + +A+A     +HYA +R   G  +     +K  +AD+A+
Sbjct: 256 IAMA---QLDFARVGIAAQALGIAQAALELAVHYASQRKSFGQTINQFQAVKLRLADMAI 312

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L +R A   DE +  ++E++ A++ A        + A  +   A++ +GG GY
Sbjct: 313 KLESARLLVWRAAVLCDEPQRSTKESSMAKLAAS-------EAATFITHGAIQILGGMGY 365

Query: 425 IEERSIARHYRESPANSILLG 445
           I +    RHYR++    I  G
Sbjct: 366 ISDMPAERHYRDARITEIYGG 386


>gi|170726671|ref|YP_001760697.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812018|gb|ACA86602.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 585

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 36/297 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRNIRTKATPNDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDTSG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  NG+    +++K+G +++AT  + +    G+L+G  N   G
Sbjct: 224 ISLFLVPKIKVDDEGNLGEANGVTVGSIEHKMGLKASATCVMNYDGAQGYLIGKPN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG         IL+  
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATSDPILVHG 340

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKM 407
            V +R + +I +   A  ALS       D AK    EA      Y  ++ P++K +    
Sbjct: 341 DV-RRMLLNIRVLTEAGRALSVLTGQQLDIAKYGDGEAQAKANRYVGLLTPVSKAFLSDR 399

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                  A +  GG GYI E  I +  R++    I  G+     +D L     G NL
Sbjct: 400 GLDAAVTAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|254429877|ref|ZP_05043584.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196196046|gb|EDX91005.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 598

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  ++  +    T      + PK+ S E+  T             + LTE   G+
Sbjct: 125 MYPGLSHGAVATIEEHGTDEQKNGYLPKLTSGEWTGT-------------MCLTEPSCGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  + S+ +  +DG Y ++G K F+S+   D       I+LA++ G       +  F+V
Sbjct: 172 DLGILKSKAEPNADGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIV 231

Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L DG+      N +    +++K+G +++AT  + F    G+L+G  N     +    
Sbjct: 232 PKFLTDGNGSVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L +AI  V+   +     + YA+     R +SG          +I  P ++R +  
Sbjct: 292 NFARLGTAIQGVAHAEIGFQGGLTYAKDRLAMRSLSGPKNPEGPADPIIVHPDVRRMLLT 351

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415
                    AL +  A   D+ K   +EAA         ++ PI K +  +         
Sbjct: 352 SKSFAEGGRALVYLCAQLGDKVKLEKDEAARKEADDLMALLTPIAKAFVTEAGLEAANHG 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + ++ R++  +++  G+     LD+L 
Sbjct: 412 VQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLG 452


>gi|88802456|ref|ZP_01117983.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781314|gb|EAR12492.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 388

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + S   K  D  Y L+G K F+++ + SD  I+ A+ +       +
Sbjct: 125 LCITEPFGGSDVAGMRSTAAKQGDK-YILNGSKTFITNGVYSDYLIVAAKTDPSDKYKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + D S  GL   +L +K+G R++ T EL F N       ++ +     E+ K   Y 
Sbjct: 184 SLFVVDRSSKGLSATKL-DKLGWRASDTAELAFDNV------EIPLENRLGEEGKGFPYI 236

Query: 318 -----LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                L+  IM V+       +L  A+ Y + R   G  L     ++  IA++A  +   
Sbjct: 237 MQHFALERLIMGVNAHARAEFALDYAVDYIQERVAFGKSLDQFQALRHKIAEMASKVDMC 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              ++ +    D         AY    A I+K    KMA  VI +A++ +GG GYIE+  
Sbjct: 297 REYNYSITKRLDAG-------AYVVKEASISKLLSTKMADEVIYDALQMLGGYGYIEDYP 349

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           +AR  R+S    I  G G + +L
Sbjct: 350 MARLLRDSRLGPI--GGGTSEIL 370


>gi|291334178|gb|ADD93846.1| acyl CoA dehydrogenase [uncultured marine bacterium
           MedDCM-OCT-S08-C116]
          Length = 596

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 38/295 (12%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  S E   T   PM +      + LTE + GTD+A I S+     D  + ++G K +++
Sbjct: 138 KSASPELQQTFIPPMVEGRWTGTMNLTEPQAGTDLAGIKSRAVPHGDH-FLITGQKIYIT 196

Query: 237 SPMSDA-----FIMLAQV----EGRVG--CFLVPRLLEDGS-----PNGLCYQRLKNKIG 280
               D       ++LA+     EG  G   F+VP+ L D +     PN L    ++ K+G
Sbjct: 197 YGEHDMAENIIHLVLARTPDAPEGMKGISVFIVPKFLPDDAGNYTKPNDLRCLSIEKKLG 256

Query: 281 NRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAE 334
            + + T  +++       G+L+G  N     ++ M  ++      + + G+ +S     +
Sbjct: 257 IKGSPTAVMQYGEAGGAVGYLVGAENHG---IDIMFAMMNHARIAVGLQGLAISERAYQQ 313

Query: 335 AIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--- 384
           A  YA+ R          G  +++ P + R +  +  +I A  AL    A + D+A+   
Sbjct: 314 ARGYAKDRVQGVPLDGKKGDAIVNHPDVLRLLGSMKAEIEAMRALMMVGAAAMDKARHAS 373

Query: 385 --SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              +++  A A ++ PI K W  + +  + ++A++  GG G+IEE   A+HYR++
Sbjct: 374 ANGKNDHEARAGLLIPIIKGWMTERSLDITSDALQIHGGMGFIEETGAAQHYRDA 428


>gi|257093920|ref|YP_003167561.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046444|gb|ACV35632.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 597

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 60/362 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----E 250
           + LTE   G+D+AA+ ++ +  +DG Y + G K F++     M+D  I  +LA+     E
Sbjct: 162 MNLTEPSAGSDLAAVRTRAEPQADGSYKIFGQKIFITYGEHDMADNIIHLVLARTPTAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLL 299
           G  G   F+VP+ L  +DGS     +  C   +++K+G  ++ T  + F   S   G+L+
Sbjct: 222 GVKGISLFVVPKFLVNDDGSLGARNDAYCVS-IEHKLGIHASPTAIMAFGDHSGAIGYLV 280

Query: 300 GDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRR------HVSGG--- 347
           G+ N     +E M I++        +  V+    +   A  YAR R       V GG   
Sbjct: 281 GEENRG---LEYMFIMMNAARFGVGLEGVAACERAYQRARDYARDRIQCTDIGVRGGPKV 337

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401
            +I  P ++R +  +     A  AL++ +A + D A      ++R    A+  +M P+ K
Sbjct: 338 AIIQHPDVRRMLMTMKSYAEATRALAYVVAAAHDAAVHHADAETRKRNQAFVDLMIPVVK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            W  +    + +  ++  GG GY+EE   A+H R++  ++I  G+      D++      
Sbjct: 398 GWSTESGVTIASIGVQVHGGMGYVEETGAAQHLRDAQISTIYEGTTGIQANDLIG----- 452

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKEDKGLARFLTEKIALASSAAALYR 519
                     + ++ G++ K VI ++R  DS  L K+  G A F   +  LA+   AL  
Sbjct: 453 --------RKMAREGGATLKSVIAMMRALDS-DLAKQ--GGAHFAAIRSRLAAGVDALAT 501

Query: 520 AG 521
           AG
Sbjct: 502 AG 503


>gi|163856212|ref|YP_001630510.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259940|emb|CAP42241.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 608

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 48/281 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+    +DG Y LSG K F++    D       ++LA+  G   
Sbjct: 161 MNLTEPQAGSDLAQVASRAVPQADGTYRLSGQKIFITYGEHDLAENIIHLVLARTPGAPA 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295
               +  F+VP+ L  +DGS    N +    L++K+G   + T  L + +          
Sbjct: 221 GVKGISLFIVPKFLVNDDGSLGARNDVWCASLEHKLGIHGSPTAVLLYGSGKGDVGEGAV 280

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------H 343
           G+L+G+ N     +E M   I +++A   V    ++L+E     A+ YA+ R        
Sbjct: 281 GYLVGEQNRG---LEYM--FIMMNAARFGVGQQGIALSERAYQHALAYAQERVQGRAVEG 335

Query: 344 VSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIM 396
            +G + I + P ++R +  +     AA A+SF  A + D      +A+ R+   A+   +
Sbjct: 336 SAGPVTISRHPDVQRMLLTMRGLTEAARAVSFVAAAAHDKGVHHPDAEVRARNRAFYEYL 395

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            PI K +  + A  V +  ++  GG GYIEE   A++YR++
Sbjct: 396 VPIVKGFSTESAVEVASLGIQVHGGMGYIEETGAAQYYRDA 436


>gi|83592644|ref|YP_426396.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83575558|gb|ABC22109.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 596

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 65/367 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249
           LTE + GTD+  + ++     +G Y ++G K F+S+   D       ++LA+       +
Sbjct: 164 LTEPQCGTDLGLLRTKAVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGI 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP++L  E+G+    N +    L++K+G ++++T  L F    G+L+G+   
Sbjct: 224 KG-ISLFLVPKVLVTEEGALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGE--- 279

Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGGILIDQP- 353
              P + M+ +   +++A + V    + LAEA     + YAR R      SG    D+P 
Sbjct: 280 ---PHKGMRAMFAMMNTARLGVGVQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPA 336

Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                        + +RAI +    +AA   L+    +   +  +R+E   +  +M P+ 
Sbjct: 337 DPLIVHPDVRRMLLTQRAIVEGGRALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVV 396

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K     +        ++  GG GYI E  + ++ R+     I  G+     LD++     
Sbjct: 397 KALLTDLGSEATNLGVQVFGGHGYIREHGMEQYIRDCRITQIYEGTNGIQALDLVG---- 452

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL----TEKIALASSAAA 516
                      L ++ G + ++    + D I    +D  LA F+       + L  + A 
Sbjct: 453 ---------RKLPENAGRNLRRFFHPVADYIEARLDDDTLAEFVGPLAKTFVRLQQATAQ 503

Query: 517 LYRAGMN 523
           + R GM 
Sbjct: 504 VARVGMT 510


>gi|33592120|ref|NP_879764.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33602428|ref|NP_889988.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33571764|emb|CAE41265.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33576867|emb|CAE33947.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|332381536|gb|AEE66383.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 608

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 65/332 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+T  +    + + PK+   ++  T             + LTE + G+
Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++  +  DG Y LSG K F++     +++  I L         A V+G +  F+
Sbjct: 171 DLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304
           VP+ L  EDGS    N +    L++K+G   + T  L +            G+L+G+ N 
Sbjct: 230 VPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANR 289

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LID 351
               +E M   I +++A  SV    + ++E     A  YAR R     I        +  
Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAH 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +     AA A+S+  A + D      +A+ R+   A+   + PI K +  
Sbjct: 345 HPDVQRMLLTMRALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFST 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + A  V +  ++  GG G+IEE   A+HYR++
Sbjct: 405 ESAVEVASLGIQVHGGMGFIEETGAAQHYRDA 436


>gi|254785957|ref|YP_003073386.1| acyl-CoA dehydrogenase domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686128|gb|ACR13392.1| acyl-CoA dehydrogenase domain protein [Teredinibacter turnerae
           T7901]
          Length = 594

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +   DG Y + G K F+S+   D       I+LA++    EG 
Sbjct: 165 LTEAHCGTDLGMLKTRAEPQDDGSYRIQGSKIFISAGDHDLAENIVHIVLARLPDAPEGT 224

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L  EDGS    N +    +++K+G   NAT  L F +  G+L+G  N  
Sbjct: 225 KGISLFIVPKYLPAEDGSVGERNAVTCGSIEHKMGIHGNATCVLNFDDATGYLIGPPNRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQP 353
              +        L +A+  ++   V   +++ YA+ R     +SG          +I  P
Sbjct: 285 LHCMFTFMNTARLGTALQGLAHAEVGYQKSLSYAKERLQMRALSGPKNPSGPADPIIVHP 344

Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R      A A+    +    +    +    D+A  ++E A     + PI K +  + 
Sbjct: 345 DVRRMLLTQKAFAEGGRMLIHYCSQLVDIEQLSDDAGRKTEAADLLAFLTPIAKAFLTET 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  A++C GG GYI E  + ++ R++    +  G+     LD+L 
Sbjct: 405 GFEAANHALQCFGGHGYIREWGVEQNVRDARIAMLYEGTTGIQALDLLG 453


>gi|213584052|ref|ZP_03365878.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 85

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 45/75 (60%)

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           R+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI  GSGN M LD
Sbjct: 1   RLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLD 60

Query: 454 VLNLLEKGTNLFEQL 468
           VL +L K   +++ L
Sbjct: 61  VLRVLTKQHGVYDVL 75


>gi|299134749|ref|ZP_07027941.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590559|gb|EFI50762.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 594

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 48/358 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + G+D+ A+ ++ +K  DG Y LSG K F++    D       ++LA++ G     
Sbjct: 163 LTEPQAGSDVGALRTRAEKQPDGSYRLSGTKIFITYGDHDMTGNIVHLVLARLPGAPEGT 222

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  F+VP+ L +     G+ N +    L++K+G   + T  +   +     G+LLG+ 
Sbjct: 223 KGISLFVVPKFLVNADGSLGARNDIYASGLEHKLGIHGSPTCTMTMGDKGGAVGYLLGEE 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------GG----ILIDQ 352
           N     +  M     L   +  V     +  +A+ YA  R         GG    I +  
Sbjct: 283 NNGMACMFTMMNQARLGVGLEGVGIAERATQQALAYAHERKQGRALGHKGGEPDPIAVHP 342

Query: 353 PVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            V +     RA+   A  I  ATA++  +++   +  +R +  A A ++ P+ K +   +
Sbjct: 343 DVKRNLLTMRALTAAARTICYATAVAIDISHEAKDETAREKADARAGLLTPLAKAFSTDI 402

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS----GNAMVLDVLNLLEKGTN 463
           A  V A  ++  GG+G+IEE   A++ R++   +I  G+     N +V+  L   +KG  
Sbjct: 403 ANEVAALGVQVHGGAGFIEETGAAQYVRDARILTIYEGTNGIQANDLVMRKLG-ADKGAA 461

Query: 464 L------FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
           +       EQ+ + +E     +      ILR++I         + +L EKI  +S  A
Sbjct: 462 VRDLLDELEQIVTRVEASNDPAFGATGAILREAIGSAAR---ASEWLLEKIMNSSDEA 516


>gi|78224498|ref|YP_386245.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78195753|gb|ABB33520.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 380

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 33/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGC-- 255
           ++E   G+D+ +I +    + DG  Y +SG K F  + P++  + +LA+    GR G   
Sbjct: 124 VSEPGAGSDVGSIRTTA--VRDGNEYVISGTKCFSTNGPVASYYTVLARTSENGRNGLSF 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDM 312
           FLV     DG   GL   +++ K+G R + T E+   E     G LLG+ N   G +  M
Sbjct: 182 FLV-----DGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEEN--KGFLLAM 234

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           K     D +  ++    + +AE      + ++R R   G  L +  ++++ IAD A  I 
Sbjct: 235 K---DFDMSRPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIE 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R A  +D+ K  ++       +A + K +    A  +  +A++  GG GY+++
Sbjct: 292 AARGLIYRAAALYDQGKRNTK-------LASMGKLFASDAAMQITTDAIQVFGGYGYMQD 344

Query: 428 RSIARHYRESPANSILLGS 446
             + R +R++    I  G+
Sbjct: 345 YPVERMFRDAKLTQIFEGA 363


>gi|89894462|ref|YP_517949.1| hypothetical protein DSY1716 [Desulfitobacterium hafniense Y51]
 gi|219668887|ref|YP_002459322.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|89333910|dbj|BAE83505.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539147|gb|ACL20886.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 380

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC-FL 257
            GLTE   G+D +   +   K  D  Y ++G K F+++   +D +++ AQ++   G   +
Sbjct: 123 FGLTEPMAGSDASGTRTTAVKDGDD-YIINGTKIFITNAYEADTYVVTAQMDKSKGNKGI 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
              +LE G P G  + + + K+G RS+AT EL F N     +   N+     +  KI ++
Sbjct: 182 AAFILEKGMP-GFSFGKKEKKMGIRSSATYELVFDNV---RVPGENLLGQEGQGFKIAMV 237

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIALDIAAATA 371
            LD   + ++   + +A+  +   R++    +   QP+      +  +AD+A  I AA  
Sbjct: 238 TLDFGRIGIASQALGIAQGAYEQARKYAKERVQFGQPIAQFQANQFKLADMATQIEAARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A    + K  S+ +A A++ A  T  W       V  +A++  GG GY  E  + 
Sbjct: 298 LVYQAAYLATQHKPVSKASAMAKLHASETAMW-------VTTQAVQMHGGYGYTREYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKITEIYEGT 365


>gi|262380863|ref|ZP_06074014.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|262297498|gb|EEY85416.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 593

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 53/372 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITGTKI 196

Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++     +SD  I L       A    R +  F+VP+ L  EDGS    N +    +++
Sbjct: 197 FITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    GF++G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQNAAQ 316

Query: 338 YARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YA  R              V+  IL+   V +R + ++  +  A+ A +  +    D  K
Sbjct: 317 YATDRIQGRNASGIKSPNKVADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++  A  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCK 495
              I  G+      D++   L++      E+  + + +D  ++    +  ++D ++    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEK 507
           + + ++RF+ E+
Sbjct: 495 DIEAVSRFIIEQ 506


>gi|187477865|ref|YP_785889.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115422451|emb|CAJ48976.1| probable acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 606

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 65/332 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+   +P   K + P++    +  T             + LTE + G+
Sbjct: 124 LCPMLTDGVIEALLMVGSPAQQKAYVPQLIGGRWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++     DG Y L+G K F++     +++  I L         A V+G +  F+
Sbjct: 171 DLALLATRAVPQPDGSYRLTGQKIFITYGEHDLAENIIHLVLARLPDAPAGVKG-ISLFI 229

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304
           VP++L  EDGS    N +    L++K+G   + T  + +            G+L+G  N 
Sbjct: 230 VPKVLVNEDGSLGRRNDVWCASLEHKLGIHGSPTAVMLYGAGKGEVGEGAVGYLIGQANR 289

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------HVSGGILIDQ 352
               +E M   I +++A  SV    ++L+E     A  YAR R        ++G + I  
Sbjct: 290 G---LEYM--FIMMNAARFSVGQQGIALSERAYQKAQAYARERIQGRAIEGLAGPVSISH 344

Query: 353 -PVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCC 405
            P ++R +  +     AA A+S+  A + D+ K       R+   A+   + PI K +  
Sbjct: 345 HPDVQRMLLTMRALTEAARAVSYVAAAAHDKGKHHPDAEVRARNQAFYEYLVPIVKGFST 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + A  V +  ++  GG G+IEE   A+HYR++
Sbjct: 405 ESAVEVASLGVQVHGGVGFIEETGAAQHYRDA 436


>gi|86738776|ref|YP_479176.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86565638|gb|ABD09447.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 614

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 165/372 (44%), Gaps = 56/372 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F+++     P +   ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTRAIEQPDGTWHIEGVKRFITNGDWDVPENIIHLVLARPEGHGPGS 223

Query: 253 --VGCFLVPRLLED---GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+ + D   G+P   NG+    ++ K+G + +AT EL F       G+L+GD
Sbjct: 224 KGLSMFVVPKFMPDPRTGTPGARNGVYVTNIEKKMGLKVSATCELRFGERAPAVGWLVGD 283

Query: 302 LNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGG------------ 347
             V  G  +  +++ Y    + S  ++ +      A+ +AR R V G             
Sbjct: 284 --VHEGIAQMFQVIEYARMMVGSKAIATLSTGYLNALEFARTR-VQGADLARASDKTAPR 340

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYAR----IMAPI 399
             +I  P ++R +    +      +L    A   D    A  R E    A     ++ PI
Sbjct: 341 VTIIHHPDVRRMLMMQKVYAEGMRSLVLYTATFQDRVALAGERGEADELAERINDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + +  ++A +++ +GGSGY+++  I ++ R++  +++  G+ +    D+     
Sbjct: 401 VKGVGSERSYELLASSLQILGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 460

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-----KGLARFLTEKIALA 511
           + ++G  L   L        G +G   +   R+++ +  ED       L  FLT     A
Sbjct: 461 VRDQGQALASVLGEIQTFVKGEAGNGALRAEREALGVALEDVQSMVNSLVGFLT---GAA 517

Query: 512 SSAAALYRAGMN 523
             AAA+Y+ G+N
Sbjct: 518 EEAAAIYKVGLN 529


>gi|310658439|ref|YP_003936160.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium
           sticklandii DSM 519]
 gi|308825217|emb|CBH21255.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium
           sticklandii]
          Length = 379

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD A    Q   + DG  Y L+G K F+++   +  +I++A
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDEYVLNGSKIFITNAGYAHTYIIMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             + + G   +   + D    G      + K+G R +AT EL F N              
Sbjct: 171 MTDKKAGTRGISAFIVDADTPGFSVGPKEKKLGIRGSATCELIFEN-----------CRI 219

Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353
           P E++  K  I    A+ ++ G R+ +A            E IHY + R   G  + +  
Sbjct: 220 PKENILGKEGIGFKVAMKTLDGGRIGIAAQALGIAQGALDETIHYVKERKQFGRSIANFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  +AD+A  I +A  L ++ A + D+  S S EAA A+++A  T       A  V  
Sbjct: 280 NTQFQLADMAAKIESARLLVYKAAYNKDKGLSYSYEAAMAKLVAAET-------AMEVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY  E  + R  R++    I  G+
Sbjct: 333 KAVQLHGGYGYTREYPVERMMRDAKITEIYEGT 365


>gi|295399983|ref|ZP_06809963.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977762|gb|EFG53360.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 380

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     +    + DG  Y ++G K ++++      +++  
Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYSRQVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           V G+   G  ++  ++      G   +   +K+G R++ T EL F N     +   NV  
Sbjct: 171 VTGKDERGKNIISAIIVPTDAPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K  ++ LD   +S++ + V +A+A     + YA+ R   G  +     ++  +A
Sbjct: 228 DPKKGFKQFLHTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQAISKFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  + ++ A   D+ K  ++EA++A++ A    +  C        +A++  G
Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GY++E  + RH R+
Sbjct: 341 GYGYMKEYGVERHLRD 356


>gi|258589057|gb|ACV82568.1| acyl-CoA dehydrogenase domain protein [uncultured bacterium]
          Length = 548

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ YL+ QL    +M P   +  ++AL+           K F  ++ P  K+ ++  +  
Sbjct: 120 AKRYLLHQLGEFGVMCPIACTEGLIALI-----------KQFPEDHSPEIKSILEHCTEG 168

Query: 198 I----GLG---LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV 249
           +    G+G   +TE +GG++I A  +  + + +G  Y L G K+F S+  +D  ++ A+V
Sbjct: 169 VNGEYGIGAQFVTEIQGGSNIPA--NLLEAVPEGSHYRLYGSKFFTSAVHADYAVITAKV 226

Query: 250 EGR--VGCFLVPRLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            G   VG F+VP  ++        N     R+K K+G     T ELE+     + +G  N
Sbjct: 227 SGSEDVGTFVVPAWMQGNKDKEIRNHFRINRIKWKLGTAEVPTAELEYDGAICYKVGPTN 286

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                V  + + L  + +AI + + M  +  EA  Y+  R V G  + +  +  + + D+
Sbjct: 287 RGVANVVGIVLSLSRIAAAITNAASMTRASREAQLYSEFREVFGAKIGEWALANQQVRDV 346

Query: 363 ALDIAAATALSFRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             +   + A  F++ + F             +E      E    R +  I K      A 
Sbjct: 347 VHEAQRSLAGLFKIFSLFQSLGGHLQPGLASEEPSKIQRERFLLRELIIIQKLVTSHDAV 406

Query: 410 AVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             I + +   GG+G IE+ S + R +R++  N +  G  N +++ V   + +    +
Sbjct: 407 NTIRKGIAIFGGNGVIEDFSALPRLFRDAMVNELWEGPRNVLLMQVFRDISRAAAFY 463


>gi|194391390|dbj|BAG60813.1| unnamed protein product [Homo sapiens]
          Length = 330

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V+  +G   +  
Sbjct: 74  LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 132

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            L D    GL   + +NK+G R+++T  L F N     + + N+        K  I  L+
Sbjct: 133 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIGHGYKYAIGSLN 189

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + LA+      I Y + R   G  L D   ++  +A +A  + AA  L++
Sbjct: 190 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 249

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   +  K   +EA+ A       KY+  ++A    ++ +E +GG GY ++  + +++
Sbjct: 250 NAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYF 302

Query: 435 RESPANSILLGSGN 448
           R++   +I  G+ N
Sbjct: 303 RDAKIGTIYEGASN 316


>gi|54302789|ref|YP_132782.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
 gi|46916213|emb|CAG22982.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
          Length = 396

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 43/290 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR---- 252
           LTE   G+D AA+T+  +KI D  Y L+G K F+S +  +D  +++A+     +GR    
Sbjct: 124 LTEPNAGSDAAALTTSAKKIKDQ-YILNGAKTFISGAGETDVLVVMARTVNDEQGRNKKA 182

Query: 253 --------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
                   +  F+VP         G+ Y R + K+G  S  T  + F N       LLG 
Sbjct: 183 EHKSGAKGISAFIVP-----ADATGITYGRKEPKMGWNSQPTRSITFDNVAIPARNLLG- 236

Query: 302 LNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  SV   + +L +A  Y   R   G  L     ++  +
Sbjct: 237 -QEGEGFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGKSLAQFQGLQFKL 295

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAM 416
           AD+A ++ AA  L    A+  D  +   E  AY   A+  A  T +  C        +A+
Sbjct: 296 ADMATELVAARQLVRYAASKLD--RQDPEATAYCAMAKRFATDTGFTVCD-------QAL 346

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
           +  GG GYI+E  + R++R+   + IL G+   M L +   LL +GT + 
Sbjct: 347 QLYGGYGYIKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396


>gi|302533579|ref|ZP_07285921.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442474|gb|EFL14290.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 384

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 50/305 (16%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   T    + W P++ S E              A+G  GLTE   G+D  A+T++
Sbjct: 95  AKTVAAWGTEEQKRSWLPRLCSGE--------------ALGCFGLTEPGTGSDAGALTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGL 270
             +  D  Y +SG K F+++   +D  ++ A+++    G  G   FLVP      SP GL
Sbjct: 141 AVREGDA-YVISGSKMFITNGTWADVVLLFARIDPAIPGHRGISAFLVPA----DSP-GL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI----MSVS 326
             + +  K+G R  AT EL    T   +    +   GP  + K      SA+    MSV+
Sbjct: 195 TRREVHGKLGLRGQATAEL----TLDAVRVPASAMLGP--EGKGFSVAMSALAKGRMSVA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A+     A+ YA RR   G  +    +++  IADI++D+ AA  L++R+A+  D
Sbjct: 249 AGCVGIAQAALDAAVSYAARREQFGKPIAHHQLVQELIADISVDVDAARLLTWRVADLID 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  + E++ A++ A        + A    + A++  GG GY++E    +  R++   +
Sbjct: 309 RGRPFATESSTAKLFA-------SEAAVRAASNALQVHGGYGYVDEYPAGKLLRDARVMT 361

Query: 442 ILLGS 446
           +  G+
Sbjct: 362 LYEGT 366


>gi|110834963|ref|YP_693822.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648074|emb|CAL17550.1| acyl-CoA dehydrogenase, putative [Alcanivorax borkumensis SK2]
          Length = 598

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 143/341 (41%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  ++  +    T    + + PK+ S E+  T             + LTE   G+
Sbjct: 125 MYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTGT-------------MCLTEPSCGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  + ++ +   DG Y ++G K F+S+   D       I+LA++ G       +  F+V
Sbjct: 172 DLGILKTKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIV 231

Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ + DG+      N +    +++K+G +++AT  + F    G+L+G  N     +    
Sbjct: 232 PKFMTDGNGSVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIAD 361
               L +AI  V+   +     + YA+ R     +SG          +I  P ++R +  
Sbjct: 292 NFARLGTAIQGVAHAEIGFQGGLTYAKERLAMRSLSGPKNPEGPADPIIVHPDVRRMLLT 351

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415
                    AL +  A   D+ K   +EAA         ++ PI K +  +         
Sbjct: 352 SKAFAEGGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVTETGLEAANHG 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + ++ R++  +++  G+     LD+L 
Sbjct: 412 VQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLG 452


>gi|327482496|gb|AEA85806.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 592

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251
           LTE   GTD+  I ++ +  +DG Y +SG K F++     ++D  I L       A    
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGS 225

Query: 252 R-VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           R +  FLVP++L  +DGS    N L    +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 RGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADPIIVHP 345

Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R      A+ +     ++  AL   +A   D+  +R    A   ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQLAEAQVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG G+I E    +  R+     I  G+     LD++   ++  G  ++
Sbjct: 406 GLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMY 465

Query: 466 EQLFSTLEQDLGSSG 480
           +     +   + S+G
Sbjct: 466 QAFVDEIRAFVASAG 480


>gi|167033807|ref|YP_001669038.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166860295|gb|ABY98702.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 592

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +      + LTE   GTD+  I ++ + I++G Y +SG K F++    D       +
Sbjct: 154 PMYQGRWTGSMCLTEPHAGTDLGLIRTRAEPIAEGCYRISGTKIFITGGEQDLTENIIHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP++L D     G  N +    +++K+G +++AT  + F  
Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDADGALGEANAVSCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGIL 349
             G+L+G+ N     +  M     L   I  ++    S   AI YAR     R  +G   
Sbjct: 274 ATGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPTGAEA 333

Query: 350 IDQ--------PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------I 395
           + Q        P ++R +  +        A S  +A   D AK   + AA A+      +
Sbjct: 334 LAQHADPIVVHPDVRRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDLAACAKAEAKVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +   M         + +GG GYI E    +  R+     I  G+     LD++
Sbjct: 394 LTPVAKAFLTDMGLETTVHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|104784029|ref|YP_610527.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95113016|emb|CAK17744.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 601

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQETYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  NG+    L++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLPNAEGGVGERNGVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + R +  A    + PI K +  ++        
Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G  G        + ++   ++ G    LT KI +A+
Sbjct: 473 KFCQ--GQEGNAATKEFVEPLAAINKEWGE---LTMKIGMAA 509


>gi|307595745|ref|YP_003902062.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307550946|gb|ADN51011.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 387

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 32/274 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR---VG 254
           LTE   GTD AAI ++ ++   G + ++G K W      +D +++ A+    E R   + 
Sbjct: 126 LTEPCCGTDAAAIETRAER-RGGEWVINGRKIWITQGAYADIYLLFARTGPKEARHRAIT 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            FLV R        G C +  K   +G R     E++F++    ++GD +V     E  K
Sbjct: 185 AFLVRR--------GDCVEVSKLEMMGMRGAGEAEVKFNDC---VVGDDDVLGKINEGFK 233

Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I ++ LD A + +SG+ V L+     EA+ +A+ R   G  LID   ++  +AD+   + 
Sbjct: 234 IAMVTLDLARIGISGVAVGLSQGVLDEALEWAKTRTAFGKPLIDWEWIQFQLADMKAKLE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               ++++ A  +D     +++ ++  + A I K +  +MA  +  + ++ +GG GY +E
Sbjct: 294 IGRTVTYKAAWLYD-----NKDPSFI-LYASIAKLYTAQMAVEIARDGVQILGGFGYSKE 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
               R YR++    I  G+  A  + +  +L +G
Sbjct: 348 SFSERAYRDAKVLEIAEGTNEAQRIVIHRILARG 381


>gi|255320722|ref|ZP_05361899.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262380647|ref|ZP_06073800.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255302338|gb|EET81578.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262297595|gb|EEY85511.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 600

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++    +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAVPNTDGSYAISGEKIFISAGEHDLAENIIHIVLARLPDAPAGT 225

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  L  DG+    NG+    L++K+G   NAT  L F    GFL+G  N  
Sbjct: 226 KGISLFIVPKFNLDSDGNIAERNGVVCSALEHKMGIHGNATCVLNFDQAKGFLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        + +AI  ++    S   A+ YAR R             +    +I  P
Sbjct: 286 LNCMFTFMNSARIGTAIQGLAASEASYQGALAYARERLAMRSLAGPQHPELPADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            +++ +    +    + AL++ L+   D A+  + E    +      ++ PI K +  + 
Sbjct: 346 AVRQMLLTQKVFAEGSRALAYYLSTYVDMAEFSNNEDEKEQAENKLALLTPIAKAFMTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   M+  GG GYI E  + +  R++    +  G+     +D+L         NLL
Sbjct: 406 GVESAKHGMQIFGGHGYIAEHGMEQIARDARIACLYEGTTEIQAIDLLARKVIGSKGNLL 465

Query: 459 EKGTNLFEQL---------FSTLEQDLGSSGKKVITILRDSISLCKE 496
           +  T+  ++          FS   Q L    K+ + + RD +   ++
Sbjct: 466 KALTDEIQEFTAQHQQHDKFSAQVQQLEQLVKEWLELTRDVVDKMQQ 512


>gi|332211989|ref|XP_003255101.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Nomascus leucogenys]
          Length = 432

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   L D    GL   + +NK+G R+++T  L F N     + + N+     
Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
              K  I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A
Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERVQFGRRLFDFQGLQHQVAHVA 340

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G
Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y ++  + +++R++   +I  G+ N
Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418


>gi|152987960|ref|YP_001349460.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150963118|gb|ABR85143.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 606

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 43/317 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ +      + LTE + GTD+  + ++ +   DG Y +SG K F+SS  
Sbjct: 143 TEEQKQTYLTPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202

Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++    +G  G   F+VP+ L       G  NG+    L+ K+G ++
Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGAGGSLGPRNGVSCGALEKKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F +  GFL+G  N     +        + +AI  V+   ++   A+ YAR R 
Sbjct: 263 SATCVMNFDDATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322

Query: 344 ----VSG--------------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +SG              G +    + ++AIA+      A   L+ + A+   +   
Sbjct: 323 SMRALSGTKEPGQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            S++A YAR       + PI K    ++        M+  GG GYI E  + +  R++  
Sbjct: 380 TSDDAEYARWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439

Query: 440 NSILLGSGNAMVLDVLN 456
            ++  G+     LD+L 
Sbjct: 440 ATLYEGTTGIQALDLLG 456


>gi|294676032|ref|YP_003576647.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           capsulatus SB 1003]
 gi|294474852|gb|ADE84240.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB
           1003]
          Length = 591

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 55/391 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA+  G   
Sbjct: 161 MNLTEPHCGTDLGLLRTKAEPQADGSYKITGTKIFISAGDHDLAENIIHLVLAKAPGGGE 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ L +     G+ N +   ++++K+G   +AT  + +    G+LLGDL+
Sbjct: 221 GTKGISLFIVPKFLVNADGSLGARNAVSVGKVEHKMGIHGSATCVMNYDGATGYLLGDLH 280

Query: 304 VSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351
                +  M    ++ + L    ++ +  + +LA A    + R V+G          LI 
Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAVAEAAYQAALAYAKDRLQGRAVTGVANPAGPADPLIV 340

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409
            P ++RA+ D    +  A A +F  A   D A    +  A   I  M P+ K +      
Sbjct: 341 HPDIRRALMDQKSFLEGARAFTFWGATLIDRAHGLQDAEAEGLISLMTPVIKGFLTDKGF 400

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
               +A +  GG GYIEE+ +++  R++    I  G+     LD++     G  L  +  
Sbjct: 401 EACVQAQQVWGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLV-----GRKLAAE-- 453

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
                     GK ++       + CK   G  R      AL  ++  +  AGM      F
Sbjct: 454 ---------GGKPLMGFFEMVKAECKAHDGDERMKPFTDALKVASKQMQAAGM-----FF 499

Query: 530 LENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           L+N       +    L G ++  H++  + L
Sbjct: 500 LQNA----AKNPDAALSGSYDFMHLMGHVCL 526


>gi|194366382|ref|YP_002028992.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349186|gb|ACF52309.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 382

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 24/274 (8%)

Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           N+A  QK   AI  G       LTE + G+D  A+  +  K +DG + ++G K W  S P
Sbjct: 103 NEAQKQKYVRAIAEGEAIGAFALTEPQSGSDATAMRCRAVKQADGSFVINGKKSWITSGP 162

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++   ++ A  E   G   +   + D    G    + + K+G R++AT E+EF++   ++
Sbjct: 163 VAKYIVLFAMSEPDKGARGITAFMIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YV 219

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352
               +V     E  KI +  LD+  + ++   + +A A     I Y + R   G  +   
Sbjct: 220 AQAEDVLGQEGEGFKIAMGVLDAGRIGIASQAIGIARAAYEATIEYVKERKAFGAAIGTF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + +  IAD+   + AA  L+ R A    + K  S EAA A++ A     W       + 
Sbjct: 280 QMTQAKIADMKCKLDAALLLTLRAAWVKGQGKRFSNEAAIAKLTASEAAMW-------IT 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A++  GG GY +E  + R++R++    I  G+
Sbjct: 333 HQAVQIHGGMGYSKEMPLERYFRDAKITEIYEGT 366


>gi|157375831|ref|YP_001474431.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157318205|gb|ABV37303.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 596

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 38/292 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD+A + ++  +  +G Y +SG K F+SS   D     A ++LA+      
Sbjct: 162 MNLTESHAGTDLALLRTKAIEAGEGQYAISGEKIFISSGDHDLAENIAHLVLARLPDAPA 221

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  F+VP+ L  EDGS    N LC   L++K+G   N+T  + F    G L+GD 
Sbjct: 222 GVKG-ISLFVVPKFLINEDGSLGDANTLCATGLEHKMGIHGNSTCVMNFDGALGELVGDP 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------IL 349
           +     +  M     L   +  +    ++   A+ YA+ R    G             IL
Sbjct: 281 HQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRGLSGVKAPEMAADPIL 340

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS--EEAAYARIMA----PITKYW 403
           +   V +  ++  + +   A A+  + A   DEA+  S  E+A  A  +A    PI K +
Sbjct: 341 VHGDVRRMLMSQKSFN-EGARAMIGQQALWLDEAERHSDPEKAKMANKLAALFTPIVKGF 399

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                     +A +  GG GYI E  + +  R+   + +  G+     LD++
Sbjct: 400 VTDRGFNACVDAQQVFGGHGYIHEWGMEQFVRDIRISMLYEGTNGVQALDLV 451


>gi|147676350|ref|YP_001210565.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|147676848|ref|YP_001211063.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|147678104|ref|YP_001212319.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146272447|dbj|BAF58196.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146272945|dbj|BAF58694.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274201|dbj|BAF59950.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 379

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 19/277 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM K  +     LTE   GTD A+  S    + D  Y L+G K F+S +P++   ++ A 
Sbjct: 113 PMCKGEILGSFALTEPGAGTDAASGQSTAVLVGDE-YVLNGTKMFISNAPVAGVLVIFAS 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +      GL   +  NK+G R + T E+   +     +   N+    
Sbjct: 172 TDKSKGAKGISAFIVPADAPGLQIGKHLNKMGIRGSLTAEVIMKDC---RIPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A     E+I Y++ R   G  +     ++  IA++
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQAALDESISYSKERVQFGKPISSFQAIQWMIANM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ AA  L++  A  +D+ +  S+EAA AR+ A        + A      A++  GG 
Sbjct: 289 ATDVEAARFLTYYAAWCYDQGRPYSKEAAMARLFA-------SECAARHTNRAVQIHGGI 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458
           GYI+   + R YR++    I  G+   M + +  NLL
Sbjct: 342 GYIKGHKVERLYRDAKITEIYEGTNEVMRMVIAGNLL 378


>gi|312199133|ref|YP_004019194.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230469|gb|ADP83324.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 386

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 37/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250
            GLTE   G+D A+I +Q ++  +G + ++G K F++   +P+S    +LA        +
Sbjct: 123 FGLTEPTAGSDAASIRTQARR-DNGGWLINGTKMFITNAGTPISLGVTILAVTGVSDDGK 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
            R G F +P    DG+P G        K+G  +  T EL F + +     L+G+      
Sbjct: 182 KRYGTFFIP----DGTP-GYEKGNALRKLGWHAMDTRELVFRDCWIPDDHLIGEEGNGL- 235

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
                + L  LD   +SV+ + +SLA+     A+ +A  R   G  L     +   +AD+
Sbjct: 236 ----RQFLEVLDGGRISVAALGLSLAQTALDLALRHANEREQFGSKLSRFQAIGHKLADM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I A  AL +R A   D+ +  S+EAA A++       +  ++A    + +++  GG 
Sbjct: 292 ATEIEAGRALVYRAAWLGDQGRPFSKEAAMAKL-------YTSELANRAASASVQIHGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY+ E +I+R Y  + A  + +G G + +
Sbjct: 345 GYVRESAISRFY--ADAKVLEIGEGTSEI 371


>gi|307296093|ref|ZP_07575924.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878264|gb|EFN09486.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 576

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 148/334 (44%), Gaps = 41/334 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD+A + ++    +DG Y ++G K F+SS   D       ++LA+      
Sbjct: 161 MALTESGAGTDLALLKAKAVPDADGGYAVTGQKIFISSGDHDFGGNIIHLVLARLPDAPA 220

Query: 249 -VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+ L D        N +    L+ K+G  +  T  + +    G+L+G+ 
Sbjct: 221 GVKG-ISLFLVPKYLPDADGNFTVRNAMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEP 279

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGG----ILID 351
           +     +  M  ++  +  ++ + G+ ++ A     A       + R   G      +I+
Sbjct: 280 HRG---LAAMFTMMNAERLMVGIQGLGIAGAAYQQAAGYAKERLQGRSADGTREPVAIIE 336

Query: 352 QPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++R + +I      A  +   TAL    A+  ++A  R++      ++ P+ K    
Sbjct: 337 HADVRRMLLNIRAFVEGARALGGWTALQLDRAHHHEDAAERAKADGLVALLTPVVKAAFT 396

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
                   +A +  GG GYI E  + ++ R++    I  G+     +D++   L   G  
Sbjct: 397 DYGFESAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMAGGA 456

Query: 464 LFEQLFSTLEQDLGSSGKKVITI-LRDSISLCKE 496
           + E  F+ +  DLG++G   I +  R++++L +E
Sbjct: 457 VVEGFFALVADDLGAAGASGIAVSTREALALLRE 490


>gi|292653659|ref|YP_003533557.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291369845|gb|ADE02073.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 381

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 129/276 (46%), Gaps = 39/276 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+      +G  ++E + G+D+++I +Q ++  D  + ++G+K W  +  + D F++L +
Sbjct: 112 PVATGEAIMGAAISEPQAGSDVSSIATQAERDGDK-WVINGNKMWITNGSVGDYFVVLCE 170

Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                E R G F   +++ +   +G   +++  K+G R++ T EL        +L D+ V
Sbjct: 171 TNPDAERRHGGF--SQIIVESDRDGFDAEKITGKMGMRASDTAEL--------ILNDVRV 220

Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
              P E++         + + + D     V+   + +A      A+ YA+ R   G  L 
Sbjct: 221 ---PAENLVGEVDGGFYQQMQFFDETRTMVAAQALGIARGAAERALEYAQEREQFGQTLS 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +A++  +I AA  L+++     +E             ++ + K +  ++A  
Sbjct: 278 GFQAIQHKLAEMFTNIEAARQLTYKATWGVEEGHDDDTS------LSSMAKEFASRVAVD 331

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  EA++  GGSGY+ +  + R YR++  + I  G+
Sbjct: 332 VTNEAVQIHGGSGYVNDFDVERFYRDAKISQIYEGA 367


>gi|258541668|ref|YP_003187101.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632746|dbj|BAH98721.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635803|dbj|BAI01772.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638858|dbj|BAI04820.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641912|dbj|BAI07867.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644967|dbj|BAI10915.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648022|dbj|BAI13963.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651075|dbj|BAI17009.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654066|dbj|BAI19993.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
          Length = 380

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 21/271 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   GTD++ I +   K  +G     G  W  ++P++D   +LA+ +   G   +   
Sbjct: 121 ITEPEAGTDVSGIRTTAVKDGEGWVLNGGKIWIHNAPVADIGFVLARTDKEAGNRGMSIF 180

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + D    G+     ++K+G R++    L+F +       LLGD+N          ++  L
Sbjct: 181 IVDLHAKGVERGPKEHKMGQRASQVGALDFQDVRLGPNALLGDMNRGF-----HMMMSVL 235

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   + ++ + V +A+     A+ YA  R   G  + +   ++  +AD+A DI AA  L 
Sbjct: 236 DKGRVGIASLAVGIAQAGLEAAVEYAGTRKQFGKHISEFQGVQWLLADMAKDIEAARLLV 295

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     +   + A       K +   MA A  A+A++  GGSGYI    + R 
Sbjct: 296 YAAAMKIDHGLDATRSCSMA-------KCFAGDMAVARTADAVQVFGGSGYIRGFEVERL 348

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTN 463
           YR++    I  G+     + +   LL+KG  
Sbjct: 349 YRDAKITQIYEGTNQIQRMIIARELLKKGAT 379


>gi|146308834|ref|YP_001189299.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577035|gb|ABP86567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 590

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 34/311 (10%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S +   T   PM +   A  + LTE   GTD+  I ++ +  +DG Y ++G K F++   
Sbjct: 144 SEDLKTTYLPPMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYKVTGSKIFITGGE 203

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRS 283
            D       ++LA++         +  FLVP+++  +DGS    N +    +++K+G ++
Sbjct: 204 QDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNDDGSLGARNAVSCGSIEHKMGIKA 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342
           +AT  + F    G+L+G++N     +  M     L   I  +     S   A+ YAR R 
Sbjct: 264 SATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAVSYARERI 323

Query: 343 ------------HVSGGILIDQPVMKRAIADIALD-----IAAATALSFRLANSFDEAKS 385
                        V+  I++   V +  +   AL+      A        LA   ++A  
Sbjct: 324 QSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACYVGQQLDLAKYAEDASE 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R    A   ++ P+ K +             +  GG GYI E    +  R+     I  G
Sbjct: 384 RQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEG 443

Query: 446 SGNAMVLDVLN 456
           +     LD+L 
Sbjct: 444 TNGIQALDLLG 454


>gi|301167941|emb|CBW27527.1| acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 343

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 52/312 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +S S  S S++A        K + P + S E             +A    L+E   G+D 
Sbjct: 49  LSVSTMSQSILAEFGNEEQKKKYLPALTSGE------------EIA-AFALSESHSGSDA 95

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
           AA+ +  +K+  G Y L+G K W  S  ++  +I++A+   EG  G  +   ++ DG+  
Sbjct: 96  AALKTTAKKVEGG-YILNGTKMWITSGGIAKTYIVMARTGEEGHKG--ISAFIVRDGA-E 151

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------KI-LIYLD 319
           G  Y + +NK+G + + T EL F N F            P ED+        KI L  LD
Sbjct: 152 GFSYGKKENKMGWKVSPTRELVFENCFV-----------PEEDLLQTEGMGFKIALSALD 200

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +++  + V LA     EA+ YA  R      + D   ++  + D+A ++  +  L  
Sbjct: 201 RGRITIGSIAVGLAQRALDEAVKYALDRKQFNQAIFDFQGLQFMMTDMATEVECSRLLVE 260

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A +FD      + A  A++ A  T       A  V  +A++ +GG GY  E  + R  
Sbjct: 261 EAARNFDNGIKNQKVACMAKLKATDT-------AMKVTTDAVQVLGGVGYTSEYPVERFM 313

Query: 435 RESPANSILLGS 446
           R++    I+ G+
Sbjct: 314 RDAKVLQIVEGT 325


>gi|33595598|ref|NP_883241.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565676|emb|CAE40324.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 597

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 49/327 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +AP++ S E+  T             + LTE + GTD+  + ++ +   DG Y +SG K 
Sbjct: 152 YAPRLASGEWTGT-------------MCLTESQAGTDLGLLRTRAEPDGDGAYRISGSKM 198

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+SS   D       ++LA++         +  F+VP+ L D     G  NG+    +++
Sbjct: 199 FISSGEHDLASNIVHMVLARLPDAPAGTRGISLFVVPKRLPDAQGEPGERNGVYCDAIEH 258

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G  +NAT  L F N  G+L+G+ N     +  M     L +   ++     +L +++ 
Sbjct: 259 KLGLHANATCVLRFENARGYLVGEPNKGLAAMFVMMNSARLGTGAQALGLTETALQKSLA 318

Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           YA  R  S              +I QP ++R +         A    + LA   D     
Sbjct: 319 YAAERLQSRAPGHEKAITRADPIILQPDVRRMLLTQQAWAQGARMFLYWLALQIDTELHA 378

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +   R        ++ P+ K +    A   +  A++  GGSGYI E  I +  R+    
Sbjct: 379 ADPAERDRAGGLLSLLTPVAKAFVSDNAVESVNLAVQVHGGSGYIVESGIEKTLRDVRIL 438

Query: 441 SILLGSGNAMVLDVLN---LLEKGTNL 464
            I  G+      D+L    L ++G  L
Sbjct: 439 PIYEGTNGVQAHDLLARKVLADQGARL 465


>gi|237802424|ref|ZP_04590885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025281|gb|EGI05337.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 592

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTRAEPQADGTYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +D   GS N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSVGSRNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYALDRLQSRAPTGAQNKEKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   +E A  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSPDEVARKRADDLVALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N  F 
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAFY 465

Query: 467 QLFS 470
           Q+FS
Sbjct: 466 QVFS 469


>gi|94969498|ref|YP_591546.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551548|gb|ABF41472.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 597

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 33/275 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           L+E   G+D     ++    +DG  Y L+G K W  ++  +D +I+ A+V+G +   F+V
Sbjct: 153 LSESTSGSDAMNPRTKAVLAADGKHYVLNGEKMWITNANFADLYIVFAKVDGEKFTAFIV 212

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
            +        G      + K+G R ++T  L  ++       LLG+  +  G +    IL
Sbjct: 213 EKTFP-----GFSVGAEEKKLGIRGSSTAPLILNDCQVPVENLLGE--IGKGHIIAFNIL 265

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A   V G R  L+  I YA++R   G ++ D  +++  +A I   I    A
Sbjct: 266 NIGRFKLGAA--CVGGARNILSHTIAYAKQRKAFGKVIADFGLIREKLAQIVAGIYTGEA 323

Query: 372 LSFRLANSFDEA-----KSRSEEAAYAR-------IMAPITKYWCCKMAPAVIAEAMECI 419
           + +R     D A     K  +EE+   R       +   I K W  +M    + E ++  
Sbjct: 324 MVYRTVGMMDVALGEVEKGGAEESKETRKAIEEYAVECSIIKVWASEMLDMAVDETVQVY 383

Query: 420 GGSGYIEERSIARHYRESPANSILLGSG--NAMVL 452
           GG G++EE    R YR+S  N I  G+   N M++
Sbjct: 384 GGYGFVEEYPAERAYRDSRVNRIFEGTNEINRMII 418


>gi|262376444|ref|ZP_06069673.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
 gi|262308583|gb|EEY89717.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
          Length = 600

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y +SG K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAVPNEDGSYSISGEKIFISAGEHDLAENIVHIVLARLPDAPAGT 225

Query: 253 --VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  L E G   S NG+    L++K+G   NAT  L F N  GFL+G  N  
Sbjct: 226 KGISLFIVPKYNLDEAGNVASRNGVVCSALEHKMGIHGNATCVLNFDNAKGFLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP----VMKR 357
              +        + +AI  ++    S   A+ YA+     R + G     QP    ++  
Sbjct: 286 LNCMFTFMNSARIGTAIQGLAAAESSYQGALAYAQDRLAMRSLEGAKAPGQPADPIIVHP 345

Query: 358 AIADIALD----IAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
           A+ ++ L        + AL++ LA   D  EA    EE   A     ++ PI K    + 
Sbjct: 346 AVRNMLLTQKVFAEGSRALAYYLATYADIAEATDSPEEKKAAEDRLALLTPIAKALMTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   M+  GG GYI E  + +  R++   S+  G+     +D+L
Sbjct: 406 GIEAAKHGMQIFGGHGYIAEHGMEQIARDARIASLYEGTTEIQSIDLL 453


>gi|197295451|ref|YP_002153992.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|195944930|emb|CAR57542.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 596

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALLA 467

Query: 471 TLEQDLGSSGK 481
            +   + + GK
Sbjct: 468 EIGDTVTALGK 478


>gi|221069550|ref|ZP_03545655.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714573|gb|EED69941.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 386

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W P++ + E             V     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K F++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIV-----DARSAGISFGKYDRKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++  A ++V   +  L
Sbjct: 203 GQRGAHTCDVIFDNVKVPVANLIG-LQEGKGFKTAMKVLEKGRIHI--AAVAVGCAKRIL 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 RDALQYALERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGGNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GGSGY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGSGYMSEYGIERFYRD 356


>gi|325271496|ref|ZP_08138014.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103386|gb|EGC00715.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 592

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 40/344 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  EDGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFMVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405
            ++R +  +   I    A S  +A   D AK         RSEE     ++ P+ K +  
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDPGVRKRSEE--LVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            +         +  GG GYI E    +  R+     I  G+     LD++   ++  G  
Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGA 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
            +      + Q + S+G ++    R   +   +  GL  ++ ++
Sbjct: 464 YYTLFSDEIRQFMASAGSELDEFTRPLGAALGQLDGLTEWVLQQ 507


>gi|76802143|ref|YP_327151.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160]
 gi|76558008|emb|CAI49593.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160]
          Length = 384

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 133/280 (47%), Gaps = 45/280 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+       G  ++E   G+D+++++++ +K  D  + ++G+K W  +  + D F++L 
Sbjct: 111 APIATGDAICGAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGSVGDFFVVLC 169

Query: 248 QV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +     EGR   F   +++ +   +G    ++  K+G R++ T EL        +L D+ 
Sbjct: 170 KTDPDAEGRYNGF--SQIIVESDRDGFEADKITGKLGIRASDTAEL--------ILDDVR 219

Query: 304 VSTGPVED---------MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349
           V   P E+         ++ + + D     V+   V +A+     A+ YA+ R   G  +
Sbjct: 220 V---PEENLVGTEGMGFLQQMQFFDETRTGVAAQGVGIAKGAAERALEYAQEREQFGRPI 276

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D   ++  +AD+  ++ AA  L+++ A S D A  +  +      +A + K +  ++A 
Sbjct: 277 GDFQAIQHKLADMHTNVEAARNLTYKSAWSVDNADGQLTK------LASMAKEYASRVA- 329

Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRESPANSILLGS 446
             +  A EC+   GGSGY+++    R +R++    I  G+
Sbjct: 330 --VENANECVQIHGGSGYVDDFDAERFFRDAKITQIYEGT 367


>gi|172040286|ref|YP_001800000.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851590|emb|CAQ04566.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 389

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           + +TE   G D+A I +  +   DG + ++G K F+S+ +   F ++  +    +GR G 
Sbjct: 130 IAMTEPEAGADLAGIRTLARDNGDGSFTVNGAKTFISNGVQADFTIIVAITDPEKGRAGI 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  ++EDG         LK K+G +S  T EL F N       LLG+     G +   
Sbjct: 190 SLL--IVEDGMEGYTKTGPLK-KVGLKSQDTAELSFENVQVPAENLLGERGAGFGYLRHN 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ SV+  R +      +++ R   G  L+D    +  +A +   + AA + 
Sbjct: 247 LAQERLSIAVGSVATSRRAFDLVYQHSQDRKTFGNRLVDHQAYRWELAKMVQGLQAAQSF 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                ++  EAK + E        A + KY   ++   V+ +A++  GG G++ E  IA 
Sbjct: 307 ----VDACIEAKVKGE---LDETTAAMAKYHTTELQIEVVNQALQMHGGYGFMMEYPIAT 359

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
           HY +S    I  G    M+  +   L KG
Sbjct: 360 HYLDSRVQPIYGGPNEIMLEIISRKLAKG 388


>gi|153939781|ref|YP_001392633.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152935677|gb|ABS41175.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
          Length = 377

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG++N  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  MK L    +  A  ++   + ++ EA+ YA++R      +     ++  +A++ 
Sbjct: 228 KGFITAMKTLSVGRIGVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++  GG G
Sbjct: 288 TKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI++  I R YR+    +I  G+
Sbjct: 341 YIKDYKIERLYRDVRVIAIYEGT 363


>gi|171318080|ref|ZP_02907250.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171096759|gb|EDT41643.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 596

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGG-----ILIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R     V G       +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERIQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDVAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|111020379|ref|YP_703351.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819909|gb|ABG95193.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+T +    ++G Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALTCKASA-TEGGYVVNGAKAWITHGGIADFYNLFARTGEGSKGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP+  E     GL + + + K+G  +  T    + + F  +  +  +             
Sbjct: 186 VPKDTE-----GLTFGKPEEKMGLHAVPTTSAHYDDAF--VPAERRIGAEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA     EA+ YA+ R   G  +ID   +   +AD+A  + +A   
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYAQERTAFGKKIIDHQGLGFLLADMAAAVDSAR-- 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++ +GG GY  +  + R
Sbjct: 297 ----ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVER 351

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 352 YMREAKITQIFEGT 365


>gi|226941183|ref|YP_002796257.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716110|gb|ACO75248.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
          Length = 619

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+    +SD  I L           V
Sbjct: 191 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFISAGEHDLSDNIIHLVLARMPDSPKDV 250

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G +  F+VP+ LEDGS N +    L++K+G ++NAT  +      G+L+G+ N     +
Sbjct: 251 KG-ISLFIVPKFLEDGSRNPVSCGALEHKMGIKANATAVINLDGAKGWLIGEKNKGLACM 309

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV--------MKR 357
             M     L   +  +     S   A+ YA+     R ++G    D+P         ++R
Sbjct: 310 FTMMNAARLGCGMQGLGIGEASFQGALAYAKERLQMRALNGPACPDKPADPIIVHPDVRR 369

Query: 358 AIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYAR-----IMAPITKYWCCKMAPAV 411
            +        A  AL+  LA   D E KS  + A         ++ P+ K +        
Sbjct: 370 MLMTQKAYTEAGRALTAFLALQLDIEEKSTDDAARQDAADTVALLTPVAKAFMTDNGFLA 429

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
               ++  GG G+I E  + +  R+   + +  G+     +D+L    L+++G  L
Sbjct: 430 ANMGVQVFGGHGFIREWGMEQLVRDCRISQLYEGTNGIQAIDLLGRKVLMDQGAKL 485


>gi|145579859|pdb|2JIF|A Chain A, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579860|pdb|2JIF|B Chain B, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579861|pdb|2JIF|C Chain C, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579862|pdb|2JIF|D Chain D, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
          Length = 404

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V+  +G   +  
Sbjct: 148 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 206

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            L D    GL   + +NK+G R+++T  L F N     + + N+        K  I  L+
Sbjct: 207 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIGHGYKYAIGSLN 263

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + LA+      I Y + R   G  L D   ++  +A +A  + AA  L++
Sbjct: 264 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 323

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   +  K   +EA+ A       KY+  ++A    ++ +E +GG GY ++  + +++
Sbjct: 324 NAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYF 376

Query: 435 RESPANSILLGSGN 448
           R++   +I  G+ N
Sbjct: 377 RDAKIGTIYEGASN 390


>gi|163755824|ref|ZP_02162942.1| tryptophan synthase subunit beta [Kordia algicida OT-1]
 gi|161324345|gb|EDP95676.1| tryptophan synthase subunit beta [Kordia algicida OT-1]
          Length = 388

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 16/264 (6%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
           T   IG L +TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  ++ A+   
Sbjct: 118 TGEKIGCLCITEPFGGSDVAGMRTTAVKKGDK-YIINGSKTFITNGVYSDYLVVAAKTNP 176

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +G   +   + D    G+   +L +K+G +++ T E+ F N       L+G+ N+    
Sbjct: 177 ELGNKGISIFIMDRDTPGISATKL-DKLGWKASDTGEIAFDNVEIPIENLMGEENMGFPY 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +     L  L  AI + +    ++   + Y   R   G  +     ++  +AD+A ++  
Sbjct: 236 IMQHFALERLIMAINAHARAEFAIEYTLQYMSERQAFGRTIDKFQALRHTMADLATEVEV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               ++ +A+  D+ +   +EA  +++ +        KMA  VI + ++ +GG GY+EE 
Sbjct: 296 CKTFNYAVASRLDKKEYVVKEATMSKLQS-------TKMADNVIYQCLQMLGGYGYMEEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            +AR  R+S    I  G G + +L
Sbjct: 349 PLARMLRDSRLGPI--GGGTSEIL 370


>gi|134291066|ref|YP_001114835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134134255|gb|ABO58580.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 596

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ + A  +A   A    +A+   +  +R+   A    + PI K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHADDATRTRHQAIYEYLVPIVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR+    +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDGRILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            ++  + + GK
Sbjct: 468 EIDATVAALGK 478


>gi|221640200|ref|YP_002526462.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221160981|gb|ACM01961.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 562

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ + + DG Y ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           +   +D       ++LA++    +G  G   FLVP+ L D     G  N +    L+ K+
Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337
           G   + T  +++    G+L+G  +     +  M     + +    + V+      A A  
Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395
             RR+   GGI I+   ++R +A +  +  +A A++   A + D   A  + E  A A +
Sbjct: 317 IERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAV 375

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +   +   V +  ++  GG+G+IE    A+  R+    +I  G+     +D++
Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435

Query: 456 N--LLEKGTNLFEQL 468
              +++ G   F  L
Sbjct: 436 GRKMMDGGEAAFRLL 450


>gi|24373942|ref|NP_717985.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24348377|gb|AAN55429.1|AE015680_4 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 585

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 41/319 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++S E+             A  + +TE + G+D+  I ++     DG Y +SG K 
Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPQEDGSYAISGSKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281
           F++    D       ++LA++    G   FLVP++  +     G  NG+    +++K+G 
Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKITVNKDGCLGGTNGVSVGSIEHKMGL 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + F    G+L+G+ N     +  M     L   I  +   + +   A  YA+ 
Sbjct: 258 KGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMATDYAKE 317

Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-----S 385
           R     +GG         +I    ++R +  I     A  ALS       D AK      
Sbjct: 318 RSQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLAKYAQDDV 377

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +++ A Y  ++ P+ K +           A +  GG GYI E  + +  R++    I  G
Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGVEQLVRDTRIAQIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     +D L     G NL
Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456


>gi|154339806|ref|XP_001565860.1| isovaleryl-coA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063178|emb|CAM45378.1| putative isovaleryl-coA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 410

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 43/306 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     W PK+ + E+              +G +G++E   GTD+  + +  +K S G 
Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPGAGTDVLGMQTTAKKDSFGN 180

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +  ++D +++ A+V G++  F+V R ++     G       +K G R++
Sbjct: 181 YVLNGSKIWITNGTVADVYLIYAKVNGKITAFVVERGMK-----GFTQGPKIDKCGMRAS 235

Query: 285 ATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
              +L F +        L GD     G + ++++        ++++GM V +AE      
Sbjct: 236 HMCQLFFEDVVVPAENLLGGDGKGMVGMMRNLEL------ERVTLAGMAVGIAERSVELM 289

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  + +   ++R IA+   D  AA AL + ++++              R+
Sbjct: 290 TSYASQRKAFGHPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNQN-------RL 342

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +   K +   +A  V   A++ +GG GY ++  + R +R++    I  G+  A   ++ 
Sbjct: 343 GSDAAKLFATPIAKKVADSAIQVMGGMGYTQDMPVERLWRDAKLLEIGGGTIEAHHKNIA 402

Query: 456 NLLEKG 461
             L KG
Sbjct: 403 KDLLKG 408


>gi|26988773|ref|NP_744198.1| acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|24983569|gb|AAN67662.1|AE016396_4 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 616

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 31/284 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ Q  +DG Y ++G K F+S     ++D  + L         A V
Sbjct: 187 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 246

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307
            G +  FLVP+LL  G  N L    L++K+G +  +T  + F    G+L+G+ N      
Sbjct: 247 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACM 305

Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353
              + D +  + L    ++ +  +  LA A    + R ++G +  ++P            
Sbjct: 306 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 365

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + ++ + +    +   TA    L ++   A +R   A  A ++ PI K +   +   V
Sbjct: 366 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 425

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  ++  GG GYI E  + +  R+S    +  G+     LD++
Sbjct: 426 ASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 469


>gi|85112132|ref|XP_964284.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28926060|gb|EAA35048.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 482

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 25/265 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +K+  G Y L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 211 LAMSESGSGSDVVSMRTTAKKVEGGGYKLNGSKMWITNGPDADVIVVYAKTEPDAGSKGI 270

Query: 259 PRLLEDGSPNGL------CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
              + +   +G+      C ++L +K+G R + T EL F N F     +LG +N   G V
Sbjct: 271 TAFIVETKKDGVKAEGFECLRKL-DKMGMRGSNTGELVFENVFVPEENVLGKVN---GGV 326

Query: 310 EDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +   + L+  ++S      M+ +L  A+ YA  R   G  +    +++  +AD+   +
Sbjct: 327 RVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHSRKQFGTPIAHFQLLQGKLADMYTKL 386

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A ++  A + DE      +     I+      +  + A  V  +A++ +GG GY+E
Sbjct: 387 QASRAYTYATAKTVDEQGVIKTQDCAGAIL------YAAERATEVALDAIQILGGMGYME 440

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R  R++    I  G+G + V
Sbjct: 441 EMPVSRIMRDAKLYEI--GAGTSEV 463


>gi|108757986|ref|YP_631942.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108461866|gb|ABF87051.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 381

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 33/285 (11%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           ++F  +       P   T   +G  GLTE   G+D +++ +   +  DG + L+G K F+
Sbjct: 99  RVFGSDAQRQKYLPKLATGEYLGAWGLTEPGSGSDASSMKTTAMRKGDG-WVLNGAKMFI 157

Query: 236 S-SPMSDAFIMLA-----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +   + D F++LA     + +  +  FL    LE G P G   + +  K+G RS+ T EL
Sbjct: 158 TQGTVGDVFVVLAVTSPQKRQKGITAFL----LEKGLP-GFSQRAIHGKLGMRSSDTAEL 212

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARR 341
              N        +G+L+   G ++ MKIL   D   +++  +     R +L E+I Y+R 
Sbjct: 213 VLENVEVPDSARVGELD--HGFIDTMKIL---DRGRITIGALAVGLGRGALEESIGYSRE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +   ++  +AD+  ++ AA  L  R A   DE K  S EA+  ++ A    
Sbjct: 268 RTAFGQPISEFQGLRWMMADMKTELDAARLLVHRAAKLADEGKPYSREASMGKLFASEAA 327

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              C        +A++  GG GY  E  + R+ R++    I  G+
Sbjct: 328 MRACN-------KAVQIHGGYGYTREFPVERYLRDAKLCEIGEGT 365


>gi|15596481|ref|NP_249975.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|313106269|ref|ZP_07792514.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9947219|gb|AAG04673.1|AE004558_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|310879016|gb|EFQ37610.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 606

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 43/317 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T  AP+ +      + LTE + GTD+  + ++ +   DG Y +SG K F+SS  
Sbjct: 143 TEEQKQTYLAPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202

Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++    +G  G   F+VP+ L       G  NG+    L+ K+G ++
Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R 
Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322

Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +SG    DQ               + ++AIA+      A   L+ + A+   +   
Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +++A Y R       + PI K    ++        M+  GG GYI E  + +  R++  
Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439

Query: 440 NSILLGSGNAMVLDVLN 456
            ++  G+     LD+L 
Sbjct: 440 ATLYEGTTGIQALDLLG 456


>gi|66557634|ref|XP_623170.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Apis mellifera]
          Length = 408

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 25/264 (9%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           T   IG   L+E   G+D  A ++   K++   Y ++G K W  ++  SDA I+ A  + 
Sbjct: 140 TGTKIGCFALSEPGNGSDAGAASTIA-KLNGSNYLINGTKSWITNAYESDAIILFATTDK 198

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
                 +   + D +  GL   + ++K+G   ++T  L F +       LLG+  +    
Sbjct: 199 SKKHKGISAFIVDKTTEGLFVGKKEDKLGICGSSTCSLIFEDCKLPKENLLGESGMG--- 255

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
               KI +  LD+  + ++   + +A+A     I YA +R   G  +I    +++ IAD+
Sbjct: 256 ---FKIAMTTLDAGRIGIAAQALGIAQASLDCAIEYAAKRQAFGSSIIKLQTIQQKIADM 312

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +L + ++  L++R A   D  KS ++EAA A++ +  T  +C         + M+ +GG 
Sbjct: 313 SLRLESSRLLTWRAAALKDNNKSYTKEAAMAKLSSSETSTFCAH-------QCMQILGGM 365

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+ +    R+YR++    I  G+
Sbjct: 366 GYVSDMPAERYYRDARITEIYEGT 389


>gi|167752047|ref|ZP_02424174.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216]
 gi|167660288|gb|EDS04418.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216]
          Length = 577

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 29/293 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFL 257
           + LTE   G+D+ A+  +       G + L+G K F+++      ++LA+ E G      
Sbjct: 173 MDLTEPDAGSDLGAVMLKATYDEKSGRWLLNGVKRFITNGDGHISLVLARTEEGTSDARG 232

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  L+ D    G+  +R++NK+G + + T EL F+N    L+GD  +  G ++   ++  
Sbjct: 233 LSMLVHDKRDGGVKVRRIENKLGIKGSPTCELVFTNAPARLVGDRKM--GLIK--YVMSL 288

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +++A + +    V L EA     + YA+ R   G  +I    +   ++++   +  A AL
Sbjct: 289 MNAARLGIGAQSVGLCEAAYREALKYAQERAQFGKPIIQFAAVAEMLSNMKAKLQGARAL 348

Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            +      +              E + R E   Y R+     P+ K +  + A  +  +A
Sbjct: 349 LYETTRFVEIYKQYGHIAQERSLEPEERQEMKFYNRLADGFTPLVKLFASEYANQLAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           ++  GGSG++++    R YR++   +I  G+    V+  +N + KGT   EQ+
Sbjct: 409 VQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINAVTKGT-FLEQI 460


>gi|332141164|ref|YP_004426902.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551186|gb|AEA97904.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 586

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 40/322 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD++ ++++ +   DG Y ++G+K F+++   D       ++LA+      
Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYMITGNKIFITAGDQDWSSNVIHLVLARLPDAPK 221

Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+ L D     G  N L    +++K+G +++ T  + F    G+L+G+ 
Sbjct: 222 GVKG-ISLFLVPKFLPDANNEPGEANTLSVGSIEHKMGIKASPTCVMNFDGAKGYLVGEE 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350
           N     +  M         +  +     S   A+ YAR R  S    GI         ++
Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPDGKADPIV 340

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCC 405
            QP + R +      I    ALS   A   D     E + + +     + + PI K +  
Sbjct: 341 FQPDVARMLLTQKSLIEGCRALSLFYAKFMDVEKLGEGQEKEDAEKILQFLTPICKAFMT 400

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            M     +  ++  GG G+I E  + +  R+     +  G+     LD++   L   G  
Sbjct: 401 DMGLETTSLGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460

Query: 464 LFE---QLFSTLEQDLGSSGKK 482
           + E   + FS L  D+  S  K
Sbjct: 461 MMEATYKAFSALVGDIQDSEAK 482


>gi|207743723|ref|YP_002260115.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206595122|emb|CAQ62049.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 594

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++     M+D  +  +LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  +      A AL++  A       ++ D+A  +  EA Y   + P+ K W  +M+  V
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|86751552|ref|YP_488048.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574580|gb|ABD09137.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 593

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 48/352 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249
           LTE + G+D+ A+ ++ ++ +DG Y + G K F++     M+D  +           A  
Sbjct: 163 LTEPQAGSDVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGT 222

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
           +G +  FL+P+ L +     G+ N +    +++K+G  ++ T  ++  +     G+L+G+
Sbjct: 223 KG-ISLFLIPKFLVNADGTLGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID----QPVMK- 356
            N     +  M     L   +  V     +  +A+ YA+ R     I  D     P++K 
Sbjct: 282 ENRGMQCMFTMMNQARLGVGLEGVGIADRAYQQALAYAQERKQGRAIGSDSKGSDPIIKH 341

Query: 357 ----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                     RA+   A  I  +TA++  +A    + K ++  AA A ++ PI K +   
Sbjct: 342 PDVKRTLLLMRALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTN 463
           +   V +  ++  GG G+IEE   A+HYR++    I  G+     +D++      + G +
Sbjct: 402 IGTEVASLGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGAS 461

Query: 464 LFEQL--FSTLEQDLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIA 509
           +F  L   S + +D+ +S           LRD++         +R+L EK+ 
Sbjct: 462 VFALLDELSIIVKDVEASNDPAFGATGVRLRDALGALDR---TSRYLLEKLG 510


>gi|328951154|ref|YP_004368489.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451478|gb|AEB12379.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 381

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D AA+ ++ ++  D  Y L+G K W  +   +D  ++ A 
Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALRTRAERDGD-YYILNGTKMWISNGGEADVIVVFAT 172

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           V+  +    +V  ++E G+P GL   +L  K+G R++ T EL F N              
Sbjct: 173 VDPAKRHKGVVALVVEKGTP-GLSAHKLHGKMGQRASGTYELVFENVRVPVANRLGEEGE 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F   +  LN +  PV           A  SV   R +L EA  YA+ R   G  + D  
Sbjct: 232 GFKIAMNTLNKTRIPV-----------AAGSVGVARRALEEATKYAKEREAFGRPIADFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+ + +  A   ++  A   D+    ++ +A       + K +  ++A     
Sbjct: 281 AIQFKLADMYIGLETARMYTYYAAWLCDQGLPHAQASA-------VAKAYASEIAFKAAN 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460
           EA++  GG GY+ E  + +  R+   N I  G+     V+   NLL++
Sbjct: 334 EAIQIHGGYGYMHEYPVEKLLRDVKLNQIYEGTNEIQRVIIARNLLKE 381


>gi|295695910|ref|YP_003589148.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411512|gb|ADG06004.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 390

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 20/273 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
            R+Y P    PM +        LTE   G++ A + +   +  D  Y L+G K F+++  
Sbjct: 107 KRKYLP----PMARGEWIGAFALTEPGAGSNAANLKTTAVRKGDK-YILNGSKHFITNGS 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
           ++  F ++A  +  +G   +   + +    G    +++ K+G R + +VEL F +     
Sbjct: 162 IAQVFTVMAVTDPMMGPKGITSFIVERDFPGFRIGKIEEKMGLRGSHSVELFFEDCEVPV 221

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQP 353
             +LG      G V  +KIL    + + + + G  V L E +I YA +R   G  + +Q 
Sbjct: 222 ENVLG--REGQGYVNALKILANGRAGLAARNLGSCVKLLELSIEYAFQREQFGKPIFEQQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A++ALDI A  +L++R+A   DE  +  +EAA A+++         ++   V  
Sbjct: 280 IIQHYLAEMALDIEALRSLTYRVAWMVDEKMNVIKEAAMAKLLG-------SEVYNRVAD 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY++E  + R+YR++    I  G+
Sbjct: 333 KALQIHGGMGYMKEMPVERYYRDARITKIYEGT 365


>gi|193782672|ref|NP_436012.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|307304464|ref|ZP_07584215.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|307318172|ref|ZP_07597608.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|193073128|gb|AAK65424.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306896213|gb|EFN26963.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306902666|gb|EFN33260.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 380

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 21/269 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   GTD++ I +  ++  DG     G  W  ++P++D   +LA+ +   G   +   
Sbjct: 121 ITEPEAGTDVSGIRTTAERDGDGWMLNGGKIWIHNAPVADVGFVLARTDKEAGNRGMSIF 180

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           + D +  G+     ++K+G R++    L F++     G LLG      G    M ++  L
Sbjct: 181 IVDLNSAGVERGPKEHKMGQRASQVGALTFTDVRLPGGALLG----QEGRGFHM-MMSVL 235

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   + ++ + V +A+     A+ YA  R   G  + D   ++  +AD+A DI AA  L 
Sbjct: 236 DKGRVGIAALAVGIAQAGLEAAVDYAGTRKQFGKAISDFQGVQWLLADMAKDIEAARLLV 295

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A+  D    R  +A  A     I K +   MA    A+A++  GGSGYI    + R 
Sbjct: 296 HSAASKID----RGLDATKA---CSIAKCFAGDMAVQRTADAVQVFGGSGYIRGFEVERL 348

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKG 461
           YR++    I  G+     + +   LL+KG
Sbjct: 349 YRDAKITQIYEGTNQIQRMIIARELLKKG 377


>gi|328470429|gb|EGF41340.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 384

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T  V   + PK+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFATEDVRAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTT 139

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  +  Y L+G K F+S +  +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 ASKKGN-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQDDGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G +  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFDNVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y   R   G  L     ++  +AD+A ++ AA  L    A+  D          
Sbjct: 256 LNQATQYMLERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   +  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|221215708|ref|ZP_03588669.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221164410|gb|EED96895.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
          Length = 596

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDG+    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + PI K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  +   L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|148548899|ref|YP_001269001.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512957|gb|ABQ79817.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 591

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 31/284 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE + GTD+A + ++ Q  +DG Y ++G K F+S     ++D  + L         A V
Sbjct: 162 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307
            G +  FLVP+LL  G  N L    L++K+G +  +T  + F    G+L+G+ N      
Sbjct: 222 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACM 280

Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353
              + D +  + L    ++ +  +  LA A    + R ++G +  ++P            
Sbjct: 281 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 340

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + ++ + +    +   TA    L ++   A +R   A  A ++ PI K +   +   V
Sbjct: 341 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 400

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  ++  GG GYI E  + +  R+S    +  G+     LD++
Sbjct: 401 ASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 444


>gi|89902284|ref|YP_524755.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347021|gb|ABD71224.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 598

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 46/347 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249
           LTE   GTD+  + S+ +  +DG Y ++G K F+S+  +D       ++LA+       +
Sbjct: 167 LTEAHCGTDLGLMRSKAEPQADGTYKITGEKIFISAGENDMASNIIHLVLARLPDAPVGI 226

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G V  F+VP+ L  +DGS    NG+    L++K+G   NAT +L      G ++G  N 
Sbjct: 227 KG-VSLFIVPKFLVKQDGSLGARNGIYCGGLEHKMGICGNATAQLVLDGAVGTMVGQPNK 285

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353
               +  M     L     S+    V+   A+ YA+ R     ++G    D+P       
Sbjct: 286 GMQAMFVMMNAARLGVGNQSLGQTEVAYQNALAYAKERIQMRSLTGVKAKDKPADPIIVH 345

Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                  +  +A A+    +   +A+     +S  + K R +      ++ PI K +   
Sbjct: 346 PDVRKMLLTAKAYAEGGRALLCYSAMLLEKEHSHPDEKVRKDAGELLAMLTPIVKAFITD 405

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463
                    M+  GG GYI++  + +  R++  N I  G+     LD+L    L   G  
Sbjct: 406 NGHISTNACMQVFGGHGYIKDWGMEQFARDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 465

Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503
           L  F +L   L  + G + K       I IL D ++    + G   F
Sbjct: 466 LRKFGKLVGQLVAEEGVNEKMAEFITPIAILGDQMTKFTTEIGFKGF 512


>gi|110351008|gb|ABG73396.1| acyl-Coa dehydrogenase [Pimephales promelas]
          Length = 243

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 28/253 (11%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRL 261
           G+D  ++ ++ +K SD  Y ++G K W  ++  +  F+++A  E   G     CFLV R 
Sbjct: 4   GSDAFSLKTKAEKHSD-YYIINGSKMWISNAEHAGVFLVMANAEPAAGYRGITCFLVDR- 61

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320
                 +GL   R +NK+G R+++T  L F N     +   N+        K  I  L+ 
Sbjct: 62  ----DTDGLSIGRKENKLGXRASSTCPLTFDN---MKIHQKNILGKVGHGYKYAIGMLNE 114

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + LA+     A+ Y R+R   G  + D   ++  IA +A  + AA  L++ 
Sbjct: 115 GRIGIAAQMLGLAQGCFDHAVPYTRQRVQFGKRVFDFQGLQHQIAHVATQLEAARLLTYN 174

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +   +EA  A       KY+  ++A    ++ +E +GG G+ ++  I ++YR
Sbjct: 175 AARLKEAGRPFIKEACMA-------KYFSAEVAALTTSKCIEWMGGVGFTKDYPIEKYYR 227

Query: 436 ESPANSILLGSGN 448
           +    SI  G+ N
Sbjct: 228 DCKIGSIYEGTTN 240


>gi|120610844|ref|YP_970522.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589308|gb|ABM32748.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 597

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 133/275 (48%), Gaps = 40/275 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + ++ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQGDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPE 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F+VP+ L +     G+ N +    +++K+G +++ T  L+F +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVNADGSLGARNDVQCVSIEHKLGIKASPTAVLQFGDAGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGILIDQP 353
           + N     +E M I++      + + G+ V+     +A+ YAR     R V G +    P
Sbjct: 281 EENRG---LEYMFIMMNAARYAVGLQGIAVAERAYQQAVQYARDRVQSRPVDGSLPGSAP 337

Query: 354 VMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           ++            RA+ +    +A+  A ++  A+   +A  R +  A+   M P+ K 
Sbjct: 338 IIHHPDVRRMLMTMRALTEGCRAMASVAAAAYDAAHHHPDAGVRKQNQAFYEFMVPLVKG 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  +M+  V +  ++  GG G+IEE   A+HYR++
Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|207725352|ref|YP_002255748.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590588|emb|CAQ37550.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 594

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++     M+D  +  +LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  +      A AL++  A       ++ D+A  +  EA Y   + P+ K W  +M+  V
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|167035986|ref|YP_001671217.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166862474|gb|ABZ00882.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 600

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 46/307 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ +A I ++ +  +DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAADGSYRLKGNKIFISGGDHELSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+  +  DGS    NG+    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFNVNPDGSRGPRNGVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           +     G+L+G  +     +  M    +I + + + ++  +G   SL     YAR+R   
Sbjct: 271 DNGECVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQG 326

Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
                   H     +I+   +KR +      +  A  L    A  FD+  + SEE+   +
Sbjct: 327 RLPDNKDPHSQAVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTASEESTRQQ 386

Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W           A++ +GG GY  E  + ++YR++  N I  G+  
Sbjct: 387 TQELLDLLTPIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446

Query: 449 AMVLDVL 455
              LD+L
Sbjct: 447 IQSLDLL 453


>gi|219847153|ref|YP_002461586.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541412|gb|ACL23150.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 382

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 46/283 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D  A  +  + + D  + ++G K W  ++P++   I+ A 
Sbjct: 113 PAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGD-EWVINGQKMWITNAPIAGHIIVTAV 171

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +  +G      F+VPR    G+P GL + + + K+G R + +  +        +L D+ 
Sbjct: 172 TDPELGKKGISAFIVPR----GTP-GLSFGKHEPKMGLRGSVSTAV--------MLDDVR 218

Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGIL 349
           V   P E++         + L  LD   + +  M + LA+A + A     R R   G  +
Sbjct: 219 V---PRENLLGERGRGFIQFLQVLDGGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +   IA++A+D+AAA AL +  A   D  K  + EAA A++ A       C+   
Sbjct: 276 GAHQSVANMIANMAVDLAAARALVYTAARMKDAGKPYTREAAIAKLFASEASERICR--- 332

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               +A++  GG GY +E  + R YR++    + +G G + +L
Sbjct: 333 ----DAIQVFGGYGYSQEYPVERLYRDT--RLLTIGEGTSEIL 369


>gi|149185012|ref|ZP_01863329.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831123|gb|EDL49557.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 388

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 126/254 (49%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K+ DG Y L+G K W  ++P +D  ++ A+         +
Sbjct: 129 LAMSEAGAGSDVVSMKAKAEKV-DGGYILNGTKFWITNAPYADTLVVYAKTAPEAASRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +   +G    +   K+G R + T EL F + F   + + NV       + +L+  
Sbjct: 188 TTFLIEKDFDGFSIGQKIEKVGMRGSPTAELVFDDCF---VPEENVMGPENGGVGVLMSG 244

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++G+++ + +A     I Y R R   G  +    +M+  +AD+ + + +A A 
Sbjct: 245 LDYERVVLAGLQLGVMQACLDTVIPYLRERKQFGKFIGSFQLMQAKVADMYVALQSARAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++ +A S D  K+   +AA A ++A        + A  V AE+++ +GG+GY  +  + R
Sbjct: 305 TYAVAKSCDANKTTRFDAAGAILLA-------SENAFRVAAESVQALGGAGYTLDWPVER 357

Query: 433 HYRESPANSILLGS 446
           + R++    I  G+
Sbjct: 358 YMRDAKLLDIGAGT 371


>gi|55377902|ref|YP_135752.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230627|gb|AAV46046.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 385

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 33/273 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+      +G  ++E   G+D++++++Q +K  D  + ++G+K W  +  + D F++L +
Sbjct: 112 PVATGDAIMGAAISEPDTGSDVSSVSTQARKDGDE-WVINGNKMWITNGSVGDYFVVLCE 170

Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                EGR   F   ++L +   +G   +++  K+G R++ T EL        +L D+ V
Sbjct: 171 TDPDAEGRYNGF--SQILIESDRDGFEAEKITGKLGIRASDTAEL--------ILNDVRV 220

Query: 305 ------STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
                  T     ++I+ + D     V+   V +A      A+ YA+ R   G  + +  
Sbjct: 221 PEDNLVGTRGAGFLQIMQFFDETRTGVAAQGVGIARGAAERALEYAQDREQFGQSISEFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  +A++  +I AA  L+ + A S D    +  +      +A + K    ++A     
Sbjct: 281 ATQHKLAEMFTEIEAARQLTHKSAWSVDNDADKLTQ------LASMAKEKASRVAVETAD 334

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           EA++  GG+GY+ +  + R YR++    I  G+
Sbjct: 335 EAVQIHGGAGYVNDFDVERFYRDAKITQIYEGT 367


>gi|261753581|ref|ZP_05997290.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261743334|gb|EEY31260.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 109

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/103 (39%), Positives = 62/103 (60%)

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
           +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+AR LTE++A A++AA 
Sbjct: 4   VLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLTEQLAFAAAAAE 63

Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 64  LRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 106


>gi|167031416|ref|YP_001666647.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857904|gb|ABY96311.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 592

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 142/345 (41%), Gaps = 42/345 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405
            ++R +  +   I    A S  +A   D AK         RSEE     ++ P+ K +  
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDANVRKRSEE--LVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            +         +  GG GYI E    +  R+     I  G+     LD++   ++  G  
Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGA 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARFLTEK 507
            + +LFS   +   +S    +      +++C +   GL  ++ E+
Sbjct: 464 YY-RLFSDEIRQFIASADGALDEFAKPLAVCLDQLDGLTEWVLEQ 507


>gi|85375184|ref|YP_459246.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788267|gb|ABC64449.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 388

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + + +  G Y L+G K W  ++P +D  ++ A+ +G  G   +
Sbjct: 129 LAMSEAAAGSDVVSMKLKAEAVQGG-YVLNGTKFWITNAPEADTLVVYAKTDGSAGSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +   K+G R + T EL F +       ++G +N   G      ++
Sbjct: 188 TAFLVEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPEDRVMGPVNGGVGV-----LM 242

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++G+++ + +A     I Y R R   G  +    +M+  +AD+ + + +A 
Sbjct: 243 SGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLMQAKVADMYVSLQSAR 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++ +A S D  K+   +AA A ++A    +        V AE+++ +GG+GY  +  +
Sbjct: 303 AYTYAVAKSCDAEKTTRFDAAGAILLASENAF-------RVAAESVQALGGAGYTLDWPV 355

Query: 431 ARHYRESPANSILLGS 446
            R+ R++    I  G+
Sbjct: 356 ERYMRDAKLLDIGAGT 371


>gi|76801583|ref|YP_326591.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160]
 gi|76557448|emb|CAI49026.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160]
          Length = 374

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 44/266 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
             L+E   G++ A ++++  K  D  Y ++G K W  +   S   I+ A+ +      V 
Sbjct: 120 FALSEPDAGSNPAEMSTEAVKDGDE-YVINGKKQWITNGERSGVVILFAKTDRDDPNTVT 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312
            FLVP+ +E     GL   + ++K+G R+        S+T   L  D+ +   P E+   
Sbjct: 179 QFLVPKDVE-----GLEVGKKEDKLGLRA--------SDTTTLLFDDVRI---PAENRLT 222

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           ++   L +A   ++G R+++A            +A+ YA  R   G  LI+   +   +A
Sbjct: 223 EVGDGLQAAFSILTGGRIAIAAQAVGLAQAALDDAVEYANDREQFGKPLIEHQAIAHKLA 282

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  DI AA  L+   A        R  E       A + KY+  + A  V  EA++  G
Sbjct: 283 DMQTDIQAARLLTRDAA--------RKNETGVDPKAASMAKYFASETAVDVANEAVQVHG 334

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY ++  + R+YR++   +I  G+
Sbjct: 335 GYGYTKDFDVERYYRDAKITTIYEGT 360


>gi|149375646|ref|ZP_01893415.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149360048|gb|EDM48503.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 606

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 37/292 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  + ++     DG + LSG K F+SS   D       I+LA++    +G 
Sbjct: 165 LTEPQCGTDLGQVKTKAAPQEDGSFKLSGTKIFISSGDHDLTENIVHIVLARLPDAPKGT 224

Query: 253 VGC--FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+LL DG+      NG+    L+ K+G +++AT  + F    GFL+G  N  
Sbjct: 225 RGISLFIVPKLLPDGNGGVGEANGVTCGSLEKKMGIKASATCVMNFDEATGFLIGPENEG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +AI  V    +S   A+ YAR R              V+  ++   
Sbjct: 285 LNCMFTFMNTARIGTAIQGVGPAELSYQWALDYARERRSMRALSGKKEPDEVADSLIHHA 344

Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEA---AYAR---IMAPITKYWC 404
            V +  +   A+       L +  RLA+   E  +  ++    AY      + PI K + 
Sbjct: 345 DVRRMLLTQKAVAEGGRAMLYYAARLADHMVEGHTAGDQKKADAYDDKLGFLTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++        ++  GG GYI E  + +  R++   ++  G+     LD+L 
Sbjct: 405 TELGNEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLYEGTTGIQALDLLG 456


>gi|160897834|ref|YP_001563416.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363418|gb|ABX35031.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 596

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDELKATYLEKLVTGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++     DG Y + G K F++    D       ++LA+V G       +  F+V
Sbjct: 171 DLALVRTKADPQPDGSYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR----HVSGGI-----LIDQPVMKR- 357
            M I++      + V G+ V   S   A+ YAR R     V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERSYQHAVAYARERVQSRPVDGSVKASATIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A  +    +AA  A ++  ++   +A+ R   AA+   M P+ K +  +M+  V 
Sbjct: 348 LMTMRAYTEGCRAMAATAAAAYDASHHHADAQVREANAAFYEFMVPLVKGYSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|148652719|ref|YP_001279812.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571803|gb|ABQ93862.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 597

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 52/339 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQVEGR---- 252
           LTE   G+D+  I ++ +   DG Y ++G K F+S+    M+D    I+LA++ G     
Sbjct: 164 LTEAHAGSDLGIIRTKAEPKGDGTYAITGQKIFISAGEHDMTDNIIHIVLARLPGAPEGT 223

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  +  DGS    N +    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 224 KGISLFIVPKVNVNADGSLAERNQVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG----ILIDQPVMKR 357
              +     +  + +A+  ++   V+   ++ YA+     R +SG      + D  ++  
Sbjct: 284 LNCMFTFMNVARIGTAVQGLTASEVAFQGSLEYAKERLAMRSLSGAKAPEKVADPIIVHP 343

Query: 358 AIADIALDIAA----ATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKMA 408
           A+ ++ L   A      AL + LA   D  AK   EE  YA     ++ PI K +  +  
Sbjct: 344 AVRNMLLTEKAFAEGGRALVYYLAMFADTVAKGTGEEQQYADQMLSLLTPIAKAFLTETG 403

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                  ++  GG G+I E  + ++ R++    +  G+     LD+L             
Sbjct: 404 YEAANHGVQVYGGHGFIREWGMEQNVRDTRIACLYEGTTEIQSLDLLG------------ 451

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKE---DKGLARFL 504
                + LGS GK +    +     C+E   ++ +A F+
Sbjct: 452 ----RKVLGSQGKMLANFTKVIHKFCQEHQDNEAMAEFI 486


>gi|83591775|ref|YP_425527.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83574689|gb|ABC21240.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 589

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 60/325 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QKISDGIYCLSG 230
           W PK+ S E+  T             + LTE + G+D+AA+ ++      + DG+Y + G
Sbjct: 148 WLPKLISGEWTGT-------------MNLTEPQAGSDLAAVRTKAVAAPDLGDGVYRIFG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  F+VP+ L       G+ N L    
Sbjct: 195 SKIFITYGDHDLAPNIVHMVLARISDAPPGIKGISLFIVPKTLPTAEGGLGAANDLRCVS 254

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L++K+G  ++ T  + F +     G+L+G  N     +E M     +++A + V    V 
Sbjct: 255 LEDKLGIHASPTCVMAFGDQGGAVGYLVGAANHG---IEYM--FTMMNNARLGVGVQGVG 309

Query: 332 LAE-----AIHYARRR------HVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLA 377
            AE     A+ YAR R       V GG    +I  P ++R +  +     AA  +++  A
Sbjct: 310 QAERATQAAVEYARARVQGGDASVRGGPSVSIIHHPDVRRMLMTMRARTQAARLITYLTA 369

Query: 378 NSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + D AK  ++ A        A ++ PI K W  +    V    ++  GG GYIE+   A
Sbjct: 370 AALDTAKRHADAALRAEAATRAALLTPIAKAWSTEAGIDVANLGIQVHGGQGYIEDAGAA 429

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           +  R++   SI  G+     +D++ 
Sbjct: 430 QFLRDARIASIYEGTNGIQAIDLVG 454


>gi|299533791|ref|ZP_07047162.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718207|gb|EFI59193.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 386

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W P++ + E             V     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K F++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIV-----DARSAGISFGKYDRKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++  A ++V   +  L
Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGKGFKTAMKVLEKGRIHI--AAVAVGCAKRIL 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 HDALQYALERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGSNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GGSGY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGSGYMSEYGIERFYRD 356


>gi|187927891|ref|YP_001898378.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187724781|gb|ACD25946.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 594

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 150/325 (46%), Gaps = 55/325 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ +  EDGS    N      +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFMVNEDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ + A  +A   A +    +   +  +R + AA    + PI K W  +M+  V 
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSIDVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
           +  ++  GG G+IEE   A+ YR++
Sbjct: 408 SLGVQVHGGMGFIEETGAAQFYRDA 432


>gi|33600112|ref|NP_887672.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567710|emb|CAE31624.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 595

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 49/327 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +AP++ S E+  T             + LTE + GTD+  + ++ +   DG Y +SG K 
Sbjct: 152 YAPRLASGEWTGT-------------MCLTESQAGTDLGLLRTRAEPDGDGAYRISGSKM 198

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+SS   D       ++LA++         +  F+VP+ L D     G  NG+    +++
Sbjct: 199 FISSGEHDLASNIVHMVLARLPDAPAGTRGISLFVVPKRLPDAQGEPGERNGVYCDAIEH 258

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G  +NAT  L F N  G+L+G+ N     +  M     L +   ++     +L +++ 
Sbjct: 259 KLGLHANATCVLRFENARGYLVGEPNKGLAAMFVMMNSARLGTGAQALGLTETALQKSLA 318

Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           YA  R  S              +I QP ++R +         A    + LA   D     
Sbjct: 319 YAAERLQSRAPGHEKAITRADPIILQPDVRRMLLTQQAWAQGARMFLYWLALQIDTELHA 378

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +   R        ++ P+ K +    A   +  A++  GGSGYI E  I +  R+    
Sbjct: 379 ADPAERDRAGGLLSLLTPVAKAFVSDNAVESVNLAVQVHGGSGYIVESGIEQTLRDVRIL 438

Query: 441 SILLGSGNAMVLDVLN---LLEKGTNL 464
            I  G+      D+L    L ++G  L
Sbjct: 439 PIYEGTNGVQAHDLLARKVLADQGARL 465


>gi|107023106|ref|YP_621433.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116686652|ref|YP_839899.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105893295|gb|ABF76460.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116652367|gb|ABK13006.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 596

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|311067526|ref|YP_003972449.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310868043|gb|ADP31518.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 571

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 17/271 (6%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D + A T+         + L+G K W  ++ ++D +++ A+    +  F+V 
Sbjct: 148 LTEPSAGSDALNAKTTAVLNEEGTAWILNGEKQWITNAQVADVYVVFAKTTEGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316
           R  E     G+     + K+G + ++T  L   E S     +LG +        ++  + 
Sbjct: 208 RSFE-----GVSVGPEEKKMGIKGSSTATLILEEVSIPIENVLGKVGKGHRVALNILNMA 262

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A  ++   + +L  A++YA++R      +I   +++  IAD+A+ I  A + ++R 
Sbjct: 263 RLKLAFSNIGTSKQALKLAVNYAKQRKQFNRPIISFSMIQEKIADMAISIYGAESAAYRT 322

Query: 377 ANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A S D           R  E A       I K  C ++   ++ EA++  GG GY++E  
Sbjct: 323 AGSLDNVFDCADPLDDRLRELATYASECAINKVNCSEVLDRIVDEAVQIHGGYGYMQEYE 382

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R YR+   N I  G+     L +  LL K
Sbjct: 383 VERLYRDVRINRIFEGTNEINRLTIAKLLMK 413


>gi|309792197|ref|ZP_07686669.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308225738|gb|EFO79494.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 417

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K  +  G  LTE   GTD  A+ +  ++  D  Y L+G K W   + ++D F+++A+
Sbjct: 130 PQAKGELLAGYCLTEPNSGTDAVAMQATARRDGDA-YILNGEKIWISLADIADTFLVIAK 188

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG- 307
            +   G   +   + + +  G+    L  K+G R+         NT G +L D+ V    
Sbjct: 189 TDPTKGARGISAFIVERTMPGVSSYPLHGKLGMRAG--------NTGGLVLQDVRVPLAN 240

Query: 308 ----PVEDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                 E  KI +  LD+   +V+      ++ SL  ++ YA  RH  GG + D  ++KR
Sbjct: 241 RLGEEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASLKYAEERHSFGGPIADHQLVKR 300

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            I+ +   +  +  L +R     ++ +  + E   A+  A ++ + C         +A++
Sbjct: 301 MISHMVRKLDTSRLLVYRAGWMKNQGQRNTRETTLAKWHATVSSFECAD-------DAIQ 353

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY +E  + R+ R +    I  G+
Sbjct: 354 IHGAYGYSDEYPVERYLRNARGGIIYEGT 382


>gi|269128562|ref|YP_003301932.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313520|gb|ACY99894.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 418

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             V     LTE   G+D + +++   K  DG Y
Sbjct: 141 TEEQKRQWLPRLASGE-------------VIGAFALTEAEAGSDPSTLSTTAVKDDDGNY 187

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F++ +P +D F++ A+  G     +   L+E  +P GL       K+G R   
Sbjct: 188 VINGAKRFITNAPEADVFMVFARTGGPGSRGISTFLVERDAP-GLKVGPPDEKMGQRGAH 246

Query: 286 TVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           T E+ F N              GF     +++ G +    + + L   I         L 
Sbjct: 247 TAEVFFDNVRVPASAMVGPEGTGFRTAMASLAHGRLSIAAVCVGLAQRI---------LD 297

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E + YA+ R   G  + +  +++  IAD   ++ A  A+    A ++D  + R       
Sbjct: 298 ETVAYAKERAQGGRKIGEYQLVQGMIADSQAELYAGRAMVLEAARAYDAGEDR------- 350

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++     KY+C +M   V   A++  GG GY+   ++ R YR++
Sbjct: 351 KLGPSCAKYFCSEMLGRVADRAVQVFGGMGYMRGVAVERFYRDA 394


>gi|159045625|ref|YP_001534419.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter
           shibae DFL 12]
 gi|157913385|gb|ABV94818.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter
           shibae DFL 12]
          Length = 571

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 25/299 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRV 253
           + LTE + G+D+ A+T++     DG Y ++G K ++S   +D       ++LA++ +G  
Sbjct: 161 MNLTEPQAGSDVGALTTKAVPKGDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAP 220

Query: 254 GC-----FLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G      FLVPR L D  G+P   N L    L++K+G   + T  +++    G+L+G  +
Sbjct: 221 GTKGISLFLVPRHLPDAAGNPGVANALKVVSLEHKLGLHGSPTAVMQYEGATGWLVGPEH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------QPVMKR 357
                +  M     L   +  +     +   A+ +AR R      + D         ++R
Sbjct: 281 GGMRAMFTMMNNARLGVGVQGIGVAEAAYQHALAHARDRKQGQTPVADADSILAHADVRR 340

Query: 358 AIADIALDI--AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +  +  ++  A A ALS  +A     A      AA A ++ PI K +       V    
Sbjct: 341 MVMTMRAEVFAARAIALSTAVATDMHHATGAESWAARAALLTPICKAYGTDTGIRVADLG 400

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLE 473
           ++  GG G IEE   A++ R+    +I  G+     +D++   L  G     +L   +E
Sbjct: 401 LQVHGGMGVIEETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLADGGEAMSRLLDEIE 459


>gi|104784027|ref|YP_610525.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95113014|emb|CAK17742.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 592

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 36/318 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    N      +++K+G + +AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQGSATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKVADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   + A   R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVAMQLDSAKYSEDAATRKRSEELVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G   +
Sbjct: 406 GLECTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYY 465

Query: 466 EQLFSTLEQDLGSSGKKV 483
           +     + Q + S+G ++
Sbjct: 466 QLFADEIRQFIASAGGEL 483


>gi|294140852|ref|YP_003556830.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293327321|dbj|BAJ02052.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 585

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 34/296 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++   + DG Y ++G K F++    D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDSKG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  N +    +++K+G +++AT  + +    G+L+G+ N   G
Sbjct: 224 ISLFLVPKIKVDDSGALGESNKVTVGSIEHKMGLKASATCVMNYDEAQGYLIGEPN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGGI--------LIDQP 353
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG         +I   
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHG 340

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMA 408
            ++R + +I +   A  ALS       D     E +++++ + Y  ++ P+ K +     
Sbjct: 341 DVRRMLLNIRVLTEAGRALSVLTGQQLDIAKYGEGEAKAKASRYVGLLTPVAKAFLSDRG 400

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                 A +  GG GYI E  I +  R++    I  G+     +D L     G NL
Sbjct: 401 LDAAIMAQQVFGGHGYIRETGIVQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|262373555|ref|ZP_06066833.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
 gi|262311308|gb|EEY92394.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
          Length = 607

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 146/344 (42%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +++  M  +M   T      + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEAAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDSPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G R++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEINKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+       +  + +LA+   +A +  ++AAY           PI K +  ++     
Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMADALASGDQAAYEAADDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              ++  GG G+I+E  + +  R++  +++  G+     LD+L 
Sbjct: 413 NHGIQVYGGHGFIKEWGMEQIARDARISTLYEGTTGVQALDLLG 456


>gi|229592982|ref|YP_002875101.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364848|emb|CAY52895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 592

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/444 (21%), Positives = 177/444 (39%), Gaps = 62/444 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWHALLRRS 110
           +V  + +E + E     TA+ +A ++     Q       G RWD    F P       ++
Sbjct: 34  TVDAETVEAILEEAGKVTAKSIAPLSRGGDEQ-------GCRWDNTAVFTPDGFPQAYKT 86

Query: 111 IHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167
             +G    +  D +F  +   +A   +   +   + L  G  + P +TS + V++ T  +
Sbjct: 87  YAEGGWVGVGGDPAFGGMGMPKAVSAQVEEMINSSSLAFG--LYPMLTSGACVSINTHAS 144

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +   + PK++S E+             A  + LTE   GTD+  I ++ +  +DG Y 
Sbjct: 145 EDLKATYLPKMYSGEW-------------AGSMCLTEAHAGTDLGIIRTKAEPQADGSYK 191

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271
           +SG K F++    D       ++LA++         +  FLVP+ + +     G  N + 
Sbjct: 192 VSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGERNTVS 251

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S
Sbjct: 252 CGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGVGIQGLASGERS 311

Query: 332 LAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              AI YAR R              V+  I++  P ++R +  +        A S  +A 
Sbjct: 312 YQNAIEYARDRVQSRAPTGAQAKDKVADPIIV-HPDVRRMLLTMKASNEGGRAFSTYVAT 370

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D AK   +  A  R      ++ P+ K +   +         +  GG GYI E    +
Sbjct: 371 QLDIAKFSEDAVARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYIREWGQEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
             R+     I  G+     LD++ 
Sbjct: 431 LVRDVRITQIYEGTNGIQALDLMG 454


>gi|148381231|ref|YP_001255772.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153930801|ref|YP_001385606.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935189|ref|YP_001389012.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|168179065|ref|ZP_02613729.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|170757106|ref|YP_001782911.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|170758551|ref|YP_001788604.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|148290715|emb|CAL84846.1| putative acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC
           3502]
 gi|152926845|gb|ABS32345.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931103|gb|ABS36602.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|169122318|gb|ACA46154.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|169405540|gb|ACA53951.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|182670268|gb|EDT82244.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|322807598|emb|CBZ05173.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 377

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG++N  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227

Query: 306 TGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            G +  MK L    I + S  + ++  + ++ EA+ YA++R      +     ++  +A+
Sbjct: 228 KGFITAMKTLSVGRIGVASQALGIA--QAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLAN 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++  GG
Sbjct: 286 METKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GYI++  I R YR+    +I  G+
Sbjct: 339 YGYIKDYKIERLYRDVRVIAIYEGT 363


>gi|309388390|gb|ADO76270.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228]
          Length = 379

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +       GLTE   GTD +A  +  +   D  Y L+G K F+++  ++D FI+ A 
Sbjct: 113 PLARGDKLGAFGLTEPDAGTDASAQKTTAELDGDE-YVLNGSKIFITNAGVADTFIVFAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + +    G    + +NK+G  ++ T EL F         D  V   P
Sbjct: 172 TDKSKGTRGISAFIVEKEYPGFSVGKKENKLGINASDTRELIFK--------DCRV---P 220

Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPV 354
            E++  K  +    A+ ++ G R+ +A            E + Y + R   G  +     
Sbjct: 221 KENLLGKEGMGFKIAMATLDGGRIGVAAQALGIAQRALDETVQYVKERQQFGRAISKFQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA++A  + AA  L ++ A + D  +  S+EAA A       KY+  + A AV  +
Sbjct: 281 LQWEIAEMATKVEAARLLVYKAAKTKDSGQRFSKEAAMA-------KYYASEAAFAVANK 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GYI+E  + R  R++    I  G+
Sbjct: 334 AIQLHGGYGYIKEYPVERLLRDAKITEIYEGT 365


>gi|256544587|ref|ZP_05471959.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
 gi|256399476|gb|EEU13081.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
          Length = 400

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K+    Y L+G K F+++   +D +++ A  +   G   +
Sbjct: 144 FGLTEPNAGTDASGQQTTA-KLDGDEYVLNGTKIFITNGGYADIYVVFAMTDKSKGNHGI 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +  L+NK+G   ++T+EL F +     +   N+     +  KI +  
Sbjct: 203 SAFIVEKGTKGFDFGTLENKMGINGSSTMELIFQDC---RIPKENLLGEEGKGFKIAMAT 259

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +AE     A+ Y++ R   G  L      +  +A++A++I AA  L
Sbjct: 260 LDGGRIGIAAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARNL 319

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A+  D  ++ S  AA A++ A  T       A  V   A++ +GG GYI+E  + R
Sbjct: 320 VYKAASLKDAGENYSVAAAMAKLKASRT-------ASFVADRAVQILGGYGYIKEYDVER 372

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R++    I  G+   M++ V
Sbjct: 373 MMRDAKITEIYEGTSEVMLMVV 394


>gi|226950713|ref|YP_002805804.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
 gi|226841227|gb|ACO83893.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 377

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM +    +   LTE   G+D  A+ +  ++  D  Y L+G K F++ +P+SD  I+ A+
Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +   G   +   + D    G+ + + ++K+G     T ++   N       +LG++N  
Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227

Query: 306 TGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            G +  MK L    I + S  + ++  + ++ EA+ YA++R      +     ++  +A+
Sbjct: 228 KGFITAMKTLSVGRIGVASQALGIA--QAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLAN 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D  +   +EA+ A       KY+  + A  ++ +A++  GG
Sbjct: 286 METKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GYI++  I R YR+    +I  G+
Sbjct: 339 YGYIKDYKIERLYRDVRVIAIYEGT 363


>gi|254522364|ref|ZP_05134419.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219719955|gb|EED38480.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 382

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 18/258 (6%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           AIG   LTE + G+D  A+  +  K +DG + ++G K W  S P++   ++ A  E   G
Sbjct: 119 AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVLFAMSEPEKG 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   + D    G    + + K+G R++AT E+EF++   ++    +V     E  KI
Sbjct: 179 ARGITAFIIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAAAEDVLGQEGEGFKI 235

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD+  + ++   + +A A     + Y + R   G  +    + +  IAD+   + A
Sbjct: 236 AMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKIADMKCKLDA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+ R A    + K  S EAA A++ A     W       +  +A++  GG GY +E 
Sbjct: 296 ALLLTLRAAWVKGQGKRFSTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEM 348

Query: 429 SIARHYRESPANSILLGS 446
            + R++R++    I  G+
Sbjct: 349 PLERYFRDAKITEIYEGT 366


>gi|120555661|ref|YP_960012.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325510|gb|ABM19825.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 599

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEPHCGSDLGTLRTKAEPNADGSYSITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  EDGS    N +    L++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKQLPNEDGSAGERNAVSCGSLEHKMGIHGNATCVMNFDGAKGWLIGPENKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353
              +        + +AI  +    +    ++ YA+ R     +SG     GI   +I  P
Sbjct: 285 LNCMFTFMNTARIGTAIQGLGSAELGFQGSLAYAKERLAMRSLSGPKNPDGIADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEA-----AYARIMAPITKYWCCKM 407
            ++R +    +    A AL +      D   S ++EE      A    + PI K +  ++
Sbjct: 345 DVRRMLLTQKVVAEGARALIYLAGQQVDVVHSGKTEEERKHADALLGFLTPIAKAFLTEI 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   M+  GG GYI E  + ++ R+S    I  G+     LD+L 
Sbjct: 405 GYESANLGMQVFGGHGYIAEWGMEQNVRDSRIGMIYEGTTGIQALDLLG 453


>gi|146292689|ref|YP_001183113.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564379|gb|ABP75314.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 596

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F +  G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEDALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLPAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++       +  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|315500028|ref|YP_004088831.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315418040|gb|ADU14680.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 584

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 59/356 (16%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P+++ A++ AL    T R    + P + S E+  T             + LTE + G+
Sbjct: 124 LYPTLSQAAIEALHHHGTERQKALYLPYLTSGEWSGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFL 257
           D+A +TSQ   + DG  Y L+G K +++    +       ++LA++ G       +  FL
Sbjct: 171 DLALLTSQA--VPDGDAYRLTGQKIYITWGDHETRDNILHLVLARLPGAPEGTRGISLFL 228

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            P+ L  EDGS    N L    L++K+G  ++ T  + F      L+G  +        M
Sbjct: 229 CPKYLVNEDGSLGERNALRAVGLEHKLGIHASPTCVMAFEGAKAELVGQPHQGL-----M 283

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL--------IDQPVMKRAI 359
            +   +++A ++V    V +AE     A+ YAR R     +L         D P ++  +
Sbjct: 284 AMFTMMNAARLAVGVQGVGIAERAYQLALAYARDRRQGNSVLTGEKKAPIFDHPDVRLML 343

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAME 417
           A     I AA  +    A + D+ +  ++     R   + P+ K W   +   V +  ++
Sbjct: 344 AVSKAKIEAARGICLLTAIAADDYRLNADARVKRREDFLVPVAKAWATDIGVEVASAGVQ 403

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
             GG G+IEE   A+HYR++    I  G+      D++     G  L +   S LE
Sbjct: 404 VHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAGDLV-----GRKLGDDAASALE 454


>gi|17545644|ref|NP_519046.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427937|emb|CAD14627.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 594

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKVFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  +      A AL++  A       ++ D+A  +  EA Y   + P+ K W  +M+  V
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDATRKQNEALY-EFLVPVVKGWSTEMSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|309781061|ref|ZP_07675799.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA]
 gi|308920127|gb|EFP65786.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 594

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           P+ + +  P+G    R       +++K+G +++ T  L+F +     G L+G+ N     
Sbjct: 231 PKFMVN--PDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG--- 285

Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356
           +E M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +K
Sbjct: 286 LEYMFIMMNAARYAVGMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVK 345

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A+ + A  +A   A +    +   +  +R + AA    + PI K W  +M+  
Sbjct: 346 RMLLTMRAMTEGARALAYVAAAACDAGHHSADDAARKQNAALYEFLVPIVKGWSTEMSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+ YR++
Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQFYRDA 432


>gi|206970403|ref|ZP_03231356.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|206734980|gb|EDZ52149.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
          Length = 379

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 18/278 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYVLNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +           + +    G    + ++K+G RS+ T E+ F +     +   N+  G 
Sbjct: 172 TDPESKQHGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +AD+
Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  GG 
Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|77464317|ref|YP_353821.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77388735|gb|ABA79920.1| probable acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 562

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ + + DG Y ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           +   +D       ++LA++    +G  G   FLVP+ L D     G  N +    L+ K+
Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337
           G   + T  +++    G+L+G  +     +  M     + +    + V+      A A  
Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395
             RR+   GGI I+   ++R +A +  +  +A A++   A + D   A  + E  A A +
Sbjct: 317 MERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAL 375

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +   +   V +  ++  GG+G+IE    A+  R+    +I  G+     +D++
Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435

Query: 456 N--LLEKGTNLFEQL 468
              +++ G   F  L
Sbjct: 436 GRKMMDGGEAAFRLL 450


>gi|262203444|ref|YP_003274652.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086791|gb|ACY22759.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 591

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 50/339 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++A   TP     W   +    +  T             + L+E + G+ +A I
Sbjct: 130 TVGNANLLATYGTPEQIDTWVRPVVEGRFFGT-------------MCLSEPQAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263
           T++     DG Y ++G K ++S+   +       ++LA+  G       +  F+VP+ L 
Sbjct: 177 TTKAVPADDGTYRITGTKMWISAGEHELTENIVHLVLAKAPGGGPGVKGISLFVVPKYLA 236

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGD----LNVSTGPV 309
           DG+ N +    L +K+GNR+     L F +            G+L+G+    L+     +
Sbjct: 237 DGTRNDVALVGLNHKMGNRATTNTLLNFGDGTHSPTTVPGAVGYLVGEEHKGLSYMFHMM 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADI 362
            + +I +   +  +  +G + SL  A    + R ++      +PV       +KR +   
Sbjct: 297 NEARIGVGFLATALGYAGYQASLEYARVRTQGRPITAKDPSSKPVPIIEHADVKRMLLAQ 356

Query: 363 ALDIAAATALSFRLANSFD-EAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAME 417
              +  A AL    +   D EA +  +E A       ++ PI K W  +      + A++
Sbjct: 357 KSYVEGALALGLYCSKLVDIEATTDGDERARTTLLLDVLTPIAKSWPSQWCLEANSLAIQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY +E  + ++YR++  N I  G+     LD+L 
Sbjct: 417 VHGGYGYTKEFDVEQYYRDNRLNPIHEGTHGIQALDLLG 455


>gi|254250777|ref|ZP_04944096.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124879911|gb|EAY67267.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|304382787|ref|ZP_07365271.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973]
 gi|304336106|gb|EFM02352.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973]
          Length = 574

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 32/341 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      DG + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  + +++K+G   + T EL + N    L G  +   G ++ +  L
Sbjct: 231 RGLSMFIYDRNQGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------DQPVMKRAIADIALDI 366
           +    L  A  SV   + +  EA+ YAR R   G  +I      D   + +A  D    +
Sbjct: 289 MNGARLGIAAQSVGVSQAAYDEALAYARERKQFGTPIIAMAPVYDMLAVMKAKLDAGRSL 348

Query: 367 AAATALSFRLANSFDE--------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
              TA    L  +FD+         + ++E+  Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDLYKAFDDIARERKLTPEEKAEQKRYTRLADAFTPLAKGMNSEYANQNAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLE 473
           ++  GGSG+I E    R YR++   SI  G+    V+  +  +  G  T + +++ +   
Sbjct: 409 IQVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYTAMIDEMLAGDV 468

Query: 474 QD----LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
            D    L +  +K+  +LR++I   KE  D+ L  FL  ++
Sbjct: 469 ADAMKPLKARTEKLAAMLREAIDKVKEAGDQELQDFLARRL 509


>gi|237737830|ref|ZP_04568311.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419710|gb|EEO34757.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           mortiferum ATCC 9817]
          Length = 373

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 37/260 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---GRVGC 255
            G TE   GT   AI ++ +      Y L+G K  ++ S  +D F++ A+ +   G +  
Sbjct: 123 FGWTEAEAGTKTTAIKNENK------YVLNGKKVLITNSHEADIFVVFAKTDLENGTLSA 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R        G      ++K+G R ++T EL F N       LLG+L       E +
Sbjct: 177 FIVER-----GTKGFSVGEAEDKMGVRGSSTAELFFDNCTIPEENLLGNLG------EGL 225

Query: 313 KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  L+   + V+   V LA+     AI Y + R   G  +      +  IAD+   I
Sbjct: 226 KIAMSTLNGGRIGVAAQAVGLAQGALDAAIDYVKNRMQLGKPISHHQNTQFVIADLQTKI 285

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +++R AN     K   E+  Y   MA + K +  ++A  V  +A++  GG+GY +
Sbjct: 286 DAARLMTYRAAN----MKDLGEDYGY---MASMAKLFASEIAMEVTTKAVQLFGGNGYSK 338

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R  R++    I  G+
Sbjct: 339 KFPVERMMRDAKVTEIYEGT 358


>gi|217977902|ref|YP_002362049.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2]
 gi|217503278|gb|ACK50687.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2]
          Length = 594

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 43/293 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249
           LTE   GTD+  + ++ +  +DG Y LSG K F+S+    ++D  I L           V
Sbjct: 164 LTEPHCGTDLGLLRTRAEPEADGSYRLSGSKMFISAGEHDLTDNIIHLVLARLPDAPKGV 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FL P+ L  EDGS    NG+    +++K+G +++AT  + F     FL+G+ + 
Sbjct: 224 KG-ISLFLCPKYLVHEDGSLGARNGVSCGSIEHKMGIKASATCVMNFDGATAFLIGEPHK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARR----RHVSGGILIDQP---- 353
               +  M  ++  +   + V G+ V+ A    A  YAR     R +SG    ++P    
Sbjct: 283 G---LRAMFAMMNAERLAVGVQGLGVAEASYQGAAAYARERLQGRSLSGAKDPEKPADPI 339

Query: 354 ----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
                     + +RA A+    +A   A    L+   D A  R  E  +  ++ PI K  
Sbjct: 340 IVHPDVRRMLLTQRAYAEGCRALAVLAAKQLDLSRHSDAAVRRDAE-DFVALVTPIVKAL 398

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +        M+ +GG GYI E  + ++ R++    I  G+     LD++ 
Sbjct: 399 LTDLGTECANLGMQIMGGHGYIRENGMEQYARDARIAQIYEGTNGVQALDLVG 451


>gi|153000248|ref|YP_001365929.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151364866|gb|ABS07866.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKERLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++ A        A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|295687527|ref|YP_003591220.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429430|gb|ADG08602.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 597

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 62/363 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    T    + + PK+ + E+  T             + LTE   GTD+  + ++  
Sbjct: 136 SAIHFGGTDEQKETYLPKMVTGEWTGT-------------MNLTEPHCGTDLGLLRTKAV 182

Query: 220 KISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLLE--DGS 266
              DG Y ++G K ++S+    M+D  +  +LA++EG       +  F+VP+     DGS
Sbjct: 183 PQGDGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFFPKADGS 242

Query: 267 ----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSA 321
                 G+    L+ K+G   NAT  +++ +  G+L+G+ N        +KI+ + ++ A
Sbjct: 243 VGERNQGVKCVGLEEKMGIHGNATCVMQYDDAVGYLIGEENAG------LKIMFVMMNEA 296

Query: 322 IMSVSGMRVSLAEAIHYA---------RRRHVSG--------GILIDQPVMKRAIADIAL 364
            + V    V+  EA + A         + R ++G          +I  P ++R + D   
Sbjct: 297 RLGVGLQGVAQGEAAYQAAVAFAKDRLQGRSLTGPKNADGPADPIIVHPDVRRMLMDSKA 356

Query: 365 DIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +         TAL   L++   + K R + A Y  +M P+ K +       + + A++ 
Sbjct: 357 ILEGGRAFLFWTALHGDLSHIHPDEKVREKSADYMSLMTPVLKGYLTDKGFQICSNAVQV 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL 476
            GGSG+ E   +++  R+     I  G+     LD++   L  KG       F  ++Q +
Sbjct: 417 HGGSGFTEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEVDQFI 476

Query: 477 GSS 479
           G +
Sbjct: 477 GEN 479


>gi|218296834|ref|ZP_03497529.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218242714|gb|EED09249.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 372

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 28/278 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P  K  VA    LTE   G+D+AAI ++ +K   G        W   +P +  F++ A+V
Sbjct: 105 PRLKEEVA-SYALTEPHAGSDVAAIRTRAEKAPGGFRLFGRKAWISHAPEASFFVVFAKV 163

Query: 250 -EGRVG--CFLVPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            EGR G   FLV R   +E G P          K+G +++   E+      G L+ +  +
Sbjct: 164 AEGREGIAAFLVERKEGMEVGPP--------LPKMGQKASPAAEVPLE---GVLVPEEAL 212

Query: 305 STGPVEDMKILIYLDS----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  + + ++  S    A M+V  +R +L EA+ YAR R   G  L +   +   +A
Sbjct: 213 IAREGFRLAMRVFDRSRPMVAAMAVGLLRRALDEALAYARVREAFGKPLWEHQGVGFKLA 272

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+D+ AA  L+ R A+  +  ++ S EAA A+  A              ++EA++  G
Sbjct: 273 EMAMDLEAARLLTHRAADLAERGEANSMEAAMAKAFAADAAVRG-------VSEALQVFG 325

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GY E+  +A+ YR++    I  G+     + VL  L
Sbjct: 326 GNGYSEDCPMAKLYRDAKVLQIYEGTSEIQRVIVLREL 363


>gi|34497240|ref|NP_901455.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103096|gb|AAQ59459.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 594

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 36/308 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249
           LTE   GTD+  + S+ +   DG Y +SG K F+S+    +S+  I L           V
Sbjct: 167 LTEPHCGTDLGLLKSKAEPQEDGSYRISGTKIFISAGEHDLSENIIHLVLARLPDAPKDV 226

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G +  F+VP+ L DGS N +    L++K+G ++NAT  +      G+L+G+ N     +
Sbjct: 227 KG-ISLFIVPKYLADGSRNAVACGSLEHKMGIKANATAVINLDGAKGWLIGEANKGLSCM 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM------- 355
             M     L   +  +     S   A+ YAR     R ++G    D+   P++       
Sbjct: 286 FTMMNAARLGCGMQGLGLGEASFQGALAYARERLQMRALNGAKCPDKAADPIIVHPDVRR 345

Query: 356 ----KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
               ++A  +    +AA  AL   + +   +A  R++ A    ++ P+ K +        
Sbjct: 346 MLLTQKAYTEAGRALAALLALQLDIEDKHPDAAVRADAADLVALLTPVAKAFMTDNGFVA 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FE 466
               ++  GG GYI E  + +  R++  + I  G+     +D+L    LL++G  L  F 
Sbjct: 406 ANHGVQVFGGHGYIREWGMEQLVRDARISQIYEGTNGIQAIDLLGRKVLLDQGAKLRKFT 465

Query: 467 QLFSTLEQ 474
           +L  T  Q
Sbjct: 466 KLIHTFCQ 473


>gi|16082014|ref|NP_394434.1| acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
 gi|10640289|emb|CAC12103.1| probable acyl-CoA dehydrogenase [Thermoplasma acidophilum]
          Length = 384

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 18/274 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           GL +TE   G+D A I++   K  D  Y ++G K F+S+  +SD F++ A  +       
Sbjct: 122 GLAITEPGAGSDAAGISATAVKKGDR-YVINGDKIFISNGRISDFFVLDAVTDPGKRHRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + D    GL   R  +K+G R ++TVEL F +     +   N+     E  K+++ 
Sbjct: 181 ITAFVADRDTPGLKISRDIHKMGIRGSSTVELAFED---MEIPAENIVGKENEGFKVIME 237

Query: 317 YLDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++   +     +LAEAI Y ++R   G  + +   ++  IA++A +I AA  
Sbjct: 238 TLDAGRIGIAAQALGIAENALAEAIDYVKQRKQFGTEIANFEGIQFMIAEMATEIEAARY 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A  +   ++  E +A A++ A         +A  V  +A++  GG GY  +    
Sbjct: 298 LTYVAAEKWQNKENTIEISAMAKMKA-------SDVAMRVTTDALQLFGGYGYTTDLDAE 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           RH R++    I  G+     L +   + K T  +
Sbjct: 351 RHMRDAKITQIYEGTNQIQRLVIAKEILKKTRYY 384


>gi|228911181|ref|ZP_04074986.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228848357|gb|EEM93206.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 379

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F N       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFENCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|332559207|ref|ZP_08413529.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           WS8N]
 gi|332276919|gb|EGJ22234.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           WS8N]
          Length = 562

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++ + + DG Y ++G K ++
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196

Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279
           +   +D       ++LA++    +G  G   FLVP+ L D     G  N +    L+ K+
Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337
           G   + T  +++    G+L+G  +     +  M     + +    + V+      A A  
Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395
             RR+   GGI I+   ++R +A +  +  +A A++   A + D   A  + E  A A +
Sbjct: 317 IERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAL 375

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +   +   V +  ++  GG+G+IE    A+  R+    +I  G+     +D++
Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435

Query: 456 N--LLEKGTNLFEQL 468
              +++ G   F  L
Sbjct: 436 GRKMMDGGEAAFRLL 450


>gi|183219484|ref|YP_001837480.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909627|ref|YP_001961182.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774303|gb|ABZ92604.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777906|gb|ABZ96204.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 388

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 22/284 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +T       +TE   G+D+A I +  +++ D  Y ++G K W  ++  +D F +LA+
Sbjct: 113 PMSETFTLAAYAVTEPGAGSDVAGIRTTAKRVGDE-YIVNGSKMWITNAGHADWFFVLAK 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGD 301
            +   G   +   + D    G+   + +  +G R + T  + F        N  G     
Sbjct: 172 TDPNAGHKGMTGFIVDAKTPGIIIGKKEKNMGQRCSDTRGVTFEDVKVPKENMIGKEGEG 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIA 360
             ++ G  +  +  +    AI +V   R +L  +I YA  R+  G  I ++Q V    IA
Sbjct: 232 FKIAMGAFDKTRPAV----AIGAVGVARAALDHSIRYANTRNAFGKPISVNQGV-SFMIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A DI A   L ++ A   D     + +A+ A++       +C  MA  V  +A++  G
Sbjct: 287 EMARDIEAGRLLCWQSAWLIDNGFRNTYQASIAKV-------FCADMAMRVTTDAVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           G G+ EE  + +  R++    I  G+     + +   L  G  +
Sbjct: 340 GYGFNEEYPVEKLMRDAKIFQIYEGTSQIQRVIISKFLNDGVGI 383


>gi|167648444|ref|YP_001686107.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167350874|gb|ABZ73609.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 581

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 48/317 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ------ 248
           + LTE + G+D+AA+T+       G Y L+G K F++    D       ++LA+      
Sbjct: 159 MNLTEPQAGSDLAALTTTATPDGAGGYTLNGQKIFITWGDHDVADNVCHLVLARTPDAPP 218

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FL P +L  +DG+    N L    L++K+G   + T  + +      L+G+L
Sbjct: 219 GVKG-ISLFLAPTVLVGDDGALGEANALRVGSLEHKLGIHGSPTCVMLYEGAKAELVGEL 277

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI----L 349
                      +   +++A + V    V++AE         ++  A+ R    G     L
Sbjct: 278 GKGLA-----HMFTMMNAARLQVGTQGVAIAERAYQQALDFSLERAQGRSAWTGAYPARL 332

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYA---RIMAPITKYW 403
            D P +++ +  +   I AA  +    A + D    A +  E AA      ++ PI K W
Sbjct: 333 FDHPDIRKTLLLMKARIEAARGICLSTAVAADLSRHAATEDERAAAKLREELLTPIAKAW 392

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEK 460
              M   + +  ++  GG G+IEE   A+HYR++  N I  G+     +D++     L +
Sbjct: 393 STDMGVEIASMGVQIHGGMGFIEETGAAQHYRDARINPIYEGANGIQAIDLIGRKLGLGE 452

Query: 461 GT---NLFEQLFSTLEQ 474
           G    +L + +  TLE+
Sbjct: 453 GQAIGDLMDDMRDTLER 469


>gi|304409826|ref|ZP_07391446.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307304182|ref|ZP_07583935.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304352344|gb|EFM16742.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306913080|gb|EFN43503.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 650

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 216 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 275

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 276 GVKGISLFAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 335

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 336 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 395

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++ A        A +  P+ K + 
Sbjct: 396 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 454

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 455 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 506


>gi|293604192|ref|ZP_06686600.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292817417|gb|EFF76490.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 608

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 65/332 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+T  +    K++ P + + ++  T             + LTE + G+
Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRKEYVPNLIAGKWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++  +  DG + L G K F++     +++  I L         A V+G +  F+
Sbjct: 171 DLAQVATRAVRQDDGTFRLFGQKIFITFGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNV 304
           VP+ L D     G  N +    L++K+G   + T  L +            G+ +G+LN 
Sbjct: 230 VPKFLVDANGAVGKRNDVWCASLEHKLGIHGSPTAVLLYGTGQGEVGEGAVGYQVGELNR 289

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG----ILID 351
               +E M   I +++A  SV    + ++E     A+ YAR R     V G      ++ 
Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHALAYARERVQGRAVEGSPGPVAIVR 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +     AA A+S+  A + D+       + RS   A+   M PI K +  
Sbjct: 345 HPDVQRMLLTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRSRNRAFYEYMVPIVKGYST 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + A  V +  ++  GG G+IEE   A+ YR++
Sbjct: 405 ETAVEVASLGIQVHGGMGFIEETGAAQFYRDA 436


>gi|226311664|ref|YP_002771558.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis
           NBRC 100599]
 gi|226094612|dbj|BAH43054.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus
           brevis NBRC 100599]
          Length = 379

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 34/267 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
            GLTE   G+D A  T     ++DG + ++G K F+++    +F+ L  V  +      +
Sbjct: 123 FGLTEPNAGSD-AGGTRTNAILADGEWTINGSKCFITNASYASFLALTAVTDKEQGSRGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             F+VP      +P    +Q L N  K+G  S+ T EL   N     + + NV     E 
Sbjct: 182 TAFIVP----TDTPG---FQVLANYEKLGLHSSNTTELVLENV---RVPEENVLGKRGEG 231

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  LI LD   + +  M V +A+A     + Y+++R   G  L     ++  +AD+A+ 
Sbjct: 232 FKQFLITLDGGRIGIGAMAVGIAQAAYDKALQYSKQRTAFGNSLSHFQAIQHKLADMAMH 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  + ++ A   D  +  ++EAA A++       +  ++A +   +A++  GG GY+
Sbjct: 292 IELARTMVYKAAWLKDHGRKFTKEAAMAKL-------YASEIAMSATHQAIQIHGGYGYM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            E  + R +R+  A  + +G G + +L
Sbjct: 345 REYQVERFFRD--ARLLEIGEGTSEIL 369


>gi|170735260|ref|YP_001774374.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821298|gb|ACA95879.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|284045673|ref|YP_003396013.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283949894|gb|ADB52638.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 400

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M    +     L+E   G+D+AAI +  +K+ DG Y ++G K W  +   SD   +L + 
Sbjct: 115 MATGEIRAAFSLSEPELGSDVAAIKTAAKKLDDGAYEINGQKMWVTNGLRSDLVFVLVKT 174

Query: 250 EGR-------VGCFLVPR---LLED-GSPNGLCYQRLKNKIGNRSNATVELEF------- 291
           +         + CF+  +   + E+ G   GL       K+G +   + EL F       
Sbjct: 175 DPNAEKAHRGMTCFIAEKEGGVAENTGDFRGLIVPPQLKKMGYKGVESTELVFDGYRCPA 234

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
            N  G     LN     + D   L  ++ A   V   + +L  A+ Y++ R   G  +  
Sbjct: 235 ENILGGEAAGLNKGFAQMMDALELGRVNVAARGVGIAQRALELALRYSQERKTFGKPIAQ 294

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD+A  + AA  L+ R A   D  +    EA  A++ A     +C       
Sbjct: 295 HQAIQFKLADMATQVDAARLLTNRAARMKDAGERSDIEAGMAKLFASEAGRFC------- 347

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           + E+    GG GY +E  I R YR++P   +L+G G + +
Sbjct: 348 VEESFRIHGGYGYSKEYEIERLYRDAPL--LLIGEGTSEI 385


>gi|119505310|ref|ZP_01627384.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2080]
 gi|119458765|gb|EAW39866.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2080]
          Length = 597

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 54/338 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+SS   D       I+LA+       V
Sbjct: 165 LTEAHCGTDLGLLRTKAEAAADGSYQITGTKIFISSGEHDLTENIVHIVLARLPDAPIGV 224

Query: 250 EGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F++P+  + +DGS    N +    +++K+G   NAT  + F    G+LLG+ N 
Sbjct: 225 KG-ISLFIIPKFNVNDDGSMGERNTVRCGSIEHKMGIHGNATCVMNFDGARGYLLGEPNQ 283

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP------- 353
               +        + +A+  ++ M +   +++ YA+     R V+G    D P       
Sbjct: 284 GLQAMFTFMNTARIGTALQGIAHMELGYQKSLAYAKDRLQMRSVTGPKNPDGPADPIIVH 343

Query: 354 -------VMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
                  + ++A+++    + A T  L   +  + DE + +S E   +  M PI K +  
Sbjct: 344 PDVRRMLLTQKALSEGGRMMVAYTGKLVDVIECTTDEMEKKSAEDMLS-FMTPIAKAFLT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +        A++C GG GYI+E  + ++ R++    +  G+     LD +          
Sbjct: 403 ETGFESANLALQCFGGHGYIKEWGVEQNVRDARIGMLYEGTTGIQALDFIG--------- 453

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                   + LGS G  +    R+    CKE+  +A  
Sbjct: 454 -------RKVLGSGGVLLQNFTREIHHFCKENAEVAEL 484


>gi|126173955|ref|YP_001050104.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125997160|gb|ABN61235.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++ A        A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|331005707|ref|ZP_08329071.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
 gi|330420499|gb|EGG94801.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
          Length = 591

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 138/278 (49%), Gaps = 35/278 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ-------V 249
           LTE + G+D+AA+T++ ++  D  Y ++G K F++     M+D  +  +LA+       V
Sbjct: 164 LTEPQAGSDLAALTTKAERNGDH-YLITGSKIFITWGDHDMTDNIVQFILARLPDAPPGV 222

Query: 250 EGRVGCFLVPR--LLEDGSPNGLCYQR---LKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +G +  FLVP+  +  DGS   L   +   +++K+G  ++ T  + F +     G+L+G+
Sbjct: 223 KG-ISLFLVPKYHVNPDGSLGELNDSKPVSVEHKMGIHASPTCVMSFGDNGGAVGYLVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPV 354
            N     +  M I   L+  +  V     +   A+ YA  R       H     + + P 
Sbjct: 282 ENNGLACMFTMMIHARLEVGLEGVGLSERAYQGAVDYAINRKQGKKLGHEGSVSIAEHPD 341

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYAR---IMAPITKYWCCKMA 408
           ++R +  +     A+ A+++  + ++D +K     +++  Y +   ++ PI K W  ++A
Sbjct: 342 VRRMLMLMRSLTEASRAIAYVTSAAYDHSKYNPDTNQQQYYLQRLELLTPIVKAWPTEIA 401

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V    ++ +GG G+IEE  +A+HYR++   +I  G+
Sbjct: 402 QEVTGLGVQVLGGMGFIEESGMAQHYRDARIITIYEGT 439


>gi|237737961|ref|ZP_04568442.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
 gi|229419841|gb|EEO34888.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
          Length = 639

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +  + + D  Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAELVGD-YYILNGGKIFITNADKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q ++   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIASQALGIAQGAYEHALEYAKERVQFGKPIAQQQIISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A    E K   E       MA   K +   +   V+ +A++  GGS
Sbjct: 289 ATKLRAARFLVYSAA----ELKENHEPFGMESAMA---KQYASDICLEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|121595129|ref|YP_987025.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|222111471|ref|YP_002553735.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|120607209|gb|ABM42949.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
 gi|221730915|gb|ACM33735.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 157/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDELKATYLEKLVTGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++     DG Y + G K F++    D       ++LA+V G       +  F+V
Sbjct: 171 DLALVRTKADPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNQDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKR- 357
            M I++      + V G+ V+     +A+ YAR     R V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVQYARDRVQSRPVDGSVAGSAAIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A  +    +A   A ++  A+   +A+ R + A +   M P+ K +  +M+  V 
Sbjct: 348 LMTMRAYTEGCRAMATTAAAAYDAAHHHPDAEVRKQNAVFYEFMVPLVKGYSTEMSLEVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|33597649|ref|NP_885292.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574077|emb|CAE38401.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 608

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 65/332 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+T  +    + + PK+   ++  T             + LTE + G+
Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + ++  +  DG Y LSG K F++     +++  I L         A V+G +  F+
Sbjct: 171 DLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304
           VP+ L  EDGS    N +    L++K+G   + T  L +            G+L+G+ N 
Sbjct: 230 VPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANR 289

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LID 351
               +E M   I +++A  SV    + ++E     A  YAR R     I        +  
Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAH 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R +  +      A A+S+  A + D      +A+ R+   A+   + PI K +  
Sbjct: 345 HPDVQRMLLTMRALTEGARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFST 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + A  V +  ++  GG G+IEE   A+HYR++
Sbjct: 405 ESAVEVASLGIQVHGGMGFIEETGAAQHYRDA 436


>gi|85708606|ref|ZP_01039672.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1]
 gi|85690140|gb|EAQ30143.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1]
          Length = 601

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 51/363 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ +  A+    +    + + PK+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTNGATAAIEAAGSQEQKETYLPKMISGEWSGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++ +  +DG + ++G K F+S+   D       ++LA+  G       +  F+V
Sbjct: 173 DLGMIRTKAEPQADGSFKITGTKIFISAGEHDLTSNIIHLVLAKTPGAPDSAKGISLFIV 232

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  E+G P   NG+    ++ K+G   N+T  L +    G+++G+ N     +  M 
Sbjct: 233 PKYILDENGEPGERNGVVCGSIEKKMGIHGNSTCVLNYDEATGYMVGEENKGLAAMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGILID--------QPVMKRAIAD 361
               L   I  ++   VS    ++YA  RR  R ++G    D         P ++R + D
Sbjct: 293 NAARLGVGIQGLAQAEVSYQNGVNYALDRRQGRALTGPADKDSKADPIFVHPDVRRMLMD 352

Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEA 415
             +      AL    A   D   K+++EE          +M P+ K +       +    
Sbjct: 353 AKVFNEGMRALCLWGALQVDLTHKAQTEEERQLADDLIGLMTPVIKGYGTDKGYDIANNM 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            +  GG GYI E  + +  R++    I  G+     +D+    L  KG    +  F  L+
Sbjct: 413 QQVYGGHGYISEWGMEQFVRDARIAMIYEGTNGVQAMDLCGRKLASKGGRAIQAFFKMLD 472

Query: 474 QDL 476
            ++
Sbjct: 473 DEI 475


>gi|331238719|ref|XP_003332014.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
 gi|309311004|gb|EFP87595.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 446

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 26/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   TS      L+E   G+D  A+ ++  K S+G Y ++G K W  +S  ++ F++ A 
Sbjct: 177 PDLSTSKVACFCLSEPASGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFAN 236

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++   G     CFL+ + +      G+   + + K+G ++++T  L F N       +L 
Sbjct: 237 LDPSKGYKGISCFLLEKSM------GVEIAKKEEKLGIKASSTCTLNFDNV-KVPKENLI 289

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
              G      I I L+   + ++   V LA+     A+ Y  +R   G  + +   M+  
Sbjct: 290 GQEGLGYKYAIEI-LNEGRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQ 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            AD+  +I AA  L++  A   +E K  +E       MA + K +  ++A      A+E 
Sbjct: 349 FADVHTEIEAARMLTYNAARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEW 401

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG G+  E  I +++R+S   +I  GS N     +   ++K
Sbjct: 402 CGGVGFTRETGIEKYWRDSKIGAIYEGSSNIQRQTLAKFIQK 443


>gi|149376537|ref|ZP_01894298.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359204|gb|EDM47667.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 374

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 21/260 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVP 259
           LTE  GG+D+    ++ Q   DG + L+G K +++ +  SD + +LA+  E   G F V 
Sbjct: 122 LTEIHGGSDVWGARTRAQ-YKDGQWVLNGQKRYITNASRSDWYSVLARTGENSFGVFAVH 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILI 316
           +     S  GL + +L++K+G R + T ++ F         LLGD       + D   L 
Sbjct: 181 K-----SDPGLSFGKLESKMGVRGSPTADVIFEECRVDDYRLLGDSKEGRQYITDS--LA 233

Query: 317 YLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           Y    I   ++   + +L  AI Y + R V G  +    +++  I D+A +I A+  L +
Sbjct: 234 YTRPLIGAQALGIAQGALDAAIKYVKEREVFGQQVARFQMIRGTIGDLATEIEASRQLLY 293

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R   + +  +        AR +A + K +C  +A  V  E+++  GG+GY+ +  + R  
Sbjct: 294 RSCEAVENKEPE------ARTLASMAKLFCSNVAMKVATESVQLHGGAGYLTDFPVERMM 347

Query: 435 RESPANSILLGSGNAMVLDV 454
           R++    I  G+     L V
Sbjct: 348 RDAKITQIYEGTSEIQKLIV 367


>gi|226946604|ref|YP_002801677.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226721531|gb|ACO80702.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 601

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGLLRTRAEPQADGSYRVSGTKIFISAGEHDLAENIVHIVLARLPDAPPGT 224

Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  +D   G+ N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPADDGGLGARNQVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+   AI YAR R             +    +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGAIRYARERLQMRALSGPKAPELPADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  I        AL +  A   D A+   + A  A        + PI K +  + 
Sbjct: 345 DVRRMLLTIKAFAEGNRALLYFSARQVDIARCSQDAAERAAADLLLGFLTPIAKAFMTET 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                +  ++  GG GYI E  + ++ R+S    +  G+     LD+L    L+ +G +L
Sbjct: 405 GFEASSLGLQVYGGHGYIREWGMEQNLRDSRIAMLYEGTTGVQALDLLGRKVLMTQGESL 464


>gi|254283095|ref|ZP_04958063.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
 gi|219679298|gb|EED35647.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
          Length = 587

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 40/321 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   G+D+  + ++ ++  D  Y + G K +++    DA      ++LA++    E
Sbjct: 163 MNLTESGAGSDLGPMKTRAEREGD-HYRIFGQKIYITWGDHDANENIIHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           G  G   FLVP+ L  +DGS    N +    +++K+G   + T  + + +     G+L+G
Sbjct: 222 GSRGISLFLVPKFLVNDDGSLGARNDVYPVSVEHKLGIHGSPTCVMAYGDNDGAIGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAI 359
           + N     +  M     L   +  +     +  +A+ YAR R V GG+ +I+   +KR +
Sbjct: 282 EENNGLACMFTMMNEARLKVGLQGLGTSEGAYQQAVDYARER-VQGGVPIIEHADVKRML 340

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAE 414
             +     A  AL+F  A + D A    EEA         +M P+ K W  ++   V + 
Sbjct: 341 LTMRALNEAMRALAFSEAVTMDLAHYGPEEARTPNQRRIDLMIPVIKGWLTEVGLEVTSN 400

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            ++  GG GY+EE   A++ R+    SI  G+      D+LN               + +
Sbjct: 401 GVQVHGGMGYVEETGAAQYMRDVRIASIYEGTNGIQAADLLN-------------RKVGR 447

Query: 475 DLGSSGKKVITILRDSISLCK 495
           D G++ + V   +RD++   K
Sbjct: 448 DGGATMEAVQQEIRDTVEALK 468


>gi|296135828|ref|YP_003643070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295795950|gb|ADG30740.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 594

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 172/394 (43%), Gaps = 70/394 (17%)

Query: 152 MSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++  ++ AL+T       + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLSDGAIEALLTAGIDAQKQRYIPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + S+ +   DG Y L G K +++     M+D  + L         A V+G +  F+
Sbjct: 171 DLALVRSRAEPQGDGTYRLFGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKG-ISLFI 229

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           VP++LEDG  N +    +++K+G +++ T  L + +  G       V TG + ++     
Sbjct: 230 VPKVLEDGRRNDVWCASIEHKLGIKASPTAVLIYGDGKG------EVGTGAIGELVGEAN 283

Query: 313 ----KILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI-----LIDQPV 354
                + I +++A  +V    +++AE         A    + R V G       ++  P 
Sbjct: 284 RGLEYMFIMMNAARYAVGLQGIAVAERAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPD 343

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKM 407
           ++R +  +        AL+   A+  D  ++  +       EAAY   + P+ K +  +M
Sbjct: 344 VRRMLMTMRALTEGCRALALVAASLHDVGRAHPDAGQRAAHEAAY-EFLVPLVKGYSTEM 402

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL- 464
           +  V +  ++  GG G+IEE   A++YR++   +I  G+      D++    +  G  L 
Sbjct: 403 SIEVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVGRKTVRDGGALA 462

Query: 465 --FEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             F    S +E+ L ++G      +   +   +E
Sbjct: 463 LHFAARVSKVEEALTATGDAQAVAMAGQLRQARE 496


>gi|256371531|ref|YP_003109355.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008115|gb|ACU53682.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 379

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 37/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  A  ++ ++++D  + L G K +++   +P++    + A+ +  +  F
Sbjct: 123 FGLTEPEAGSDAGATRTRAERVAD-RWRLRGEKAYITNSGTPITSVVTVTARTDEGISAF 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVED 311
           +VP         GL       K+G R+        S+T G +L D  V        P   
Sbjct: 182 IVP-----AGTAGLTVLPSYRKLGWRA--------SDTHGIVLEDAEVGDDALLGAPGAG 228

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +  L  LD   ++++ + + L EA     + +A+ R+  GG +     +   +AD+ + 
Sbjct: 229 FRQFLATLDEGRVAIAALALGLQEACLREGLEWAKARNAFGGPIGRFQAIAFKLADLEVA 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  L +R A   D+ +  + EAA       I K +  + A +   EA + +GG+G+I
Sbjct: 289 VEASRHLVYRAAWLRDQGRPFAREAA-------IAKLYATEAAVSAAREATQILGGAGFI 341

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
           E+  +AR+YR+  A  + +G G + +
Sbjct: 342 EDTPVARYYRD--AKILEIGEGTSEI 365


>gi|85717536|ref|ZP_01048481.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85695653|gb|EAQ33566.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 593

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 198/462 (42%), Gaps = 70/462 (15%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V   P W    RR    G +     + F       A       ++  A +  G  + P 
Sbjct: 70  RVTTAPGWADAYRRWTAAGWNAVSGPQDFGGQGLPLAINAACTEIWSAANIAFG--LCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T +++ AL T     + K +  K+ S E+  T    MQ         LTE + G+D+ A
Sbjct: 128 LTLSAIEALHTHGNDTLKKIYLEKLVSGEWTGT----MQ---------LTEPQAGSDVGA 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLVPRLL 262
           + S+ ++ +DG Y + G K F++     M+D  +  +LA++    +G  G   FL+P+ +
Sbjct: 175 LRSRAERATDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGTRGISLFLIPKFV 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            D     G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     +  M  
Sbjct: 235 VDADGSLGARNDIHASGIEHKLGIHASPTCTMTMGDDGGAIGYLIGEENRGMRCMFTMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI------LIDQPVMKRAIADIALDI 366
              L   +  V     +  +A+ YA  RR+  + G       +I  P ++R +  +    
Sbjct: 295 QARLAVGLEGVGIADRACQQALAYALERRQGRAAGTSDGMSPIIAHPDVRRMLMQMRALT 354

Query: 367 AAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           AAA A+ +  A S D A        R+  AA   ++ PI K +   +   V +  ++  G
Sbjct: 355 AAARAICYATAVSLDVATRAADPDVRAAAAARGALLTPIAKAFSTDIGNEVASLGIQVHG 414

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQ 467
           G G+IEE   A+HYR+    SI  G+     +D++              LL+  +    +
Sbjct: 415 GMGFIEETGAAQHYRDVRITSIYEGTNGIQAIDLVTRKLAADGGAAVSALLDDMSATVHR 474

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           + +  E   G++G K    LRD++   +      ++L E++A
Sbjct: 475 VEALNEAAFGTTGMK----LRDALGSLER---AGKWLLERLA 509


>gi|307195515|gb|EFN77401.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 340

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++ G+   D  + ++G K W  ++  +   I+ A  +       +  
Sbjct: 81  LSEPGNGSDAGAASTVGKANGD-TFIINGTKAWITNAFEAGGIILFAATDKAKKHKGISA 139

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
            + D    GL   + ++K+G R ++T  L F +       +LG+  +        KI ++
Sbjct: 140 FIVDSPTVGLTLGKKEDKLGIRGSSTCSLIFEDCEVPKDQILGEEGMG------FKIAMM 193

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++G  + +A+A     + YA +R   G  +I    +++ IAD+AL +  +  
Sbjct: 194 TLDAGRIGIAGQALGIAQASLDCAMEYASKRQAFGAPIIKLQSIQQKIADMALRVDGSRL 253

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A   D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    
Sbjct: 254 LTWRAAQMKDAGKPFTKEAAMAKLSASETATFCAH-------QCIQILGGMGYVTDMPAE 306

Query: 432 RHYRESPANSILLGS 446
           RHYR++    I  G+
Sbjct: 307 RHYRDARITEIYEGT 321


>gi|126651843|ref|ZP_01724044.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126591311|gb|EAZ85419.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 552

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 20/272 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +  +   DG  + ++G K W  ++ ++D F++ AQ    +   +V 
Sbjct: 136 LTESDAGSDALRPKTNARLTEDGTAWIVNGEKQWITNAQLADVFVVFAQTHNGMTALIVE 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL- 315
           R     S  G+   + + K+G + ++T  L   +       +LG+  V  G +  M IL 
Sbjct: 196 R-----SFKGVSVGQEEEKMGIKGSSTATLILEDVIVPIDHVLGE--VGKGHIVAMNILN 248

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  ++   + +   A++Y + R      ++D  +++  +AD+A+ I  A + ++
Sbjct: 249 MARLKLAFSNIGTAKQAFQLAVNYGKGRRQFERSIVDFTMIQEKLADMAVLIYGAESAAY 308

Query: 375 RLANSFDEA-KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           R A   DEA  S S+E    +I        + K  C +    +  EA++  GG GY++E 
Sbjct: 309 RTAGKMDEAIASGSKETMVQKISDFALECALHKVHCSEALGKIADEAVQIHGGYGYMQEY 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R YR++  + I  G+     L +  +L K
Sbjct: 369 DVERLYRDARISRIFEGTNEINRLTLAKMLWK 400


>gi|311748610|ref|ZP_07722395.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577134|gb|EAZ81382.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 379

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 33/284 (11%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +F  E       P   T   +G  GLTE   G+D   + +   K  D  + L+G K F++
Sbjct: 100 LFGSEEQKQKYLPKLATCELLGAWGLTEPNTGSDAGNMKTVAVKDGD-YWILNGAKNFIT 158

Query: 237 SPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +S    ++    G VG       F+V R    G+P G    R ++K+G R++ T E+ 
Sbjct: 159 HGVSGDLAVVIARTGEVGDSHGMTAFIVER----GTP-GFKGGRKEDKLGMRASETAEMI 213

Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F +       +LG  NV  G ++ MK+L   D   +S++ + + +AE     +I Y++ R
Sbjct: 214 FEDCKIHESQVLG--NVGDGFIQSMKVL---DGGRISIAALSLGIAEGALEASIQYSKER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     +   +AD+A  + AA  L  + ++     K+R E+   A   A   KY
Sbjct: 269 EQFGKPISRFQGISFKLADMATQVEAAKLLIMKASD----MKNRGEKVTLASAQA---KY 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  +V  EA++  GG G+ ++  + ++YR+S   +I  G+
Sbjct: 322 YASEVCVSVSNEAVQIFGGYGFTKDYPVEKYYRDSKLCTIGEGT 365


>gi|299066892|emb|CBJ38087.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           CMR15]
          Length = 594

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKVFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  +      A AL++  A       ++ D+A  +  EA Y   + P+ K W  +M+  V
Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDATRKQNEALY-EFLVPVVKGWSTEMSIDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432


>gi|217973729|ref|YP_002358480.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217498864|gb|ACK47057.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++ A        A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|114563286|ref|YP_750799.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334579|gb|ABI71961.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 585

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE   G+D+  I ++ + + DG Y ++G+K F++    D       ++LA++ G  G
Sbjct: 164 MDMTEPHAGSDLKGIRTKAEPLDDGSYSITGNKIFITGGDHDLTENVIHLVLAKLPGSKG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              F+VP++  +     G  NG+    +++K+G +++AT  + + N  GFL+G+ +    
Sbjct: 224 ISLFIVPKISVNADGSLGESNGVTVGSIEHKMGLKASATCVMNYDNAKGFLVGEPDRGLV 283

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILIDQPVM-----K 356
            +  M     L   +  +   + +   A  YA+ R        S       P++     +
Sbjct: 284 CMFTMMNYERLAIGLQGLGNAQAAYQMASDYAKERLQGVAAAGSATGATSDPIIVHGDVR 343

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWCCKMAPAV 411
           R +  I     A  ALS       D AK  S +     A Y  ++ P++K +        
Sbjct: 344 RMLLTIRAMTEAGRALSVYTGKQLDLAKYASGDVQAKAARYVGLLTPVSKAFLTDRGLDA 403

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                +  GG GYI E  I +  R++    I  G+     +D L
Sbjct: 404 TVMGQQVFGGHGYIRETGIEQFVRDTRIAQIYEGTNGIQAIDFL 447


>gi|322370176|ref|ZP_08044738.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320550512|gb|EFW92164.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 381

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 44/267 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------V 253
           ++E   G+++A I +  ++  D  Y + G+K W  +  ++D  +++A+ +         +
Sbjct: 124 ISEPGHGSNVAGIETVARRDGDE-YVIDGNKMWITNGTVADVAVVMAKTDPEAEPPHRGI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312
              LVP  ++   P      ++ NK+G R++   E+        +L D+ V   P E++ 
Sbjct: 183 SAILVPTDVDGFEPT-----KIDNKLGIRASDLAEI--------VLDDVRV---PTENVI 226

Query: 313 --------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
                   +++ +  S  +SV+   V +A     E+I YA  R   G  + +   +   +
Sbjct: 227 GEENEGFYQLMDFFASGRVSVASQAVGVAQAAVDESIDYANEREQGGRRIKEYQAIGHKV 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA +L++R A+  D    +      A   A + K +  + A  V  EA++  
Sbjct: 287 ADMATDVEAARSLTYRAASHVDSGDDQ-----LATRFASMAKLFASEHAVDVADEAIQVH 341

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY+ +  + R+YR++    I  G+
Sbjct: 342 GGAGYVTDHPVERYYRDARITKIYEGT 368


>gi|302692004|ref|XP_003035681.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8]
 gi|300109377|gb|EFJ00779.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8]
          Length = 410

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++ ++  K+  G Y L+G+K W  + P++  F++ A+ E   G   +
Sbjct: 150 LAMSETGSGSDVVSMRTRADKVKGG-YKLNGNKFWITNGPIASTFVVYAKTEPEKGSKGI 208

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E G+P    +Q+L +K G R + T EL F +       +LG +N          +
Sbjct: 209 TAFIVEKGTPGFSTHQKL-DKFGMRGSDTCELVFEDCVVPEENVLGQVNRGAAV-----L 262

Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M+ +   A+ Y   R   G  + +  +M+  IAD+   + A+
Sbjct: 263 MSGLDLERLVLSGGPLGLMQSAFDMAVEYVHDRKQFGQPVGEFQLMQAKIADMYTKLNAS 322

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + +A + D+ +    + A A +       +  + A  V  EA +C GG+GYI +  
Sbjct: 323 RSYVYAVARACDKGRISRRDCAGAIL-------YSTEKAIEVCIEAQQCFGGNGYINDYP 375

Query: 430 IARHYRESPANSILLGS 446
           I R  R+S   ++  G+
Sbjct: 376 IGRLVRDSRLYAVGAGT 392


>gi|289650649|ref|ZP_06481992.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 592

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|326317771|ref|YP_004235443.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374607|gb|ADX46876.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 597

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 40/275 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + ++ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQGDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPE 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L +     G+ N +    +++K+G +++ T  L+F +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVNADGSLGARNDVQCVSIEHKLGIKASPTAVLQFGDGGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGILIDQP 353
           + N     +E M I++      + + G+ V+     +A+ YAR     R V G +    P
Sbjct: 281 EENRG---LEYMFIMMNAARYAVGLQGIAVAERAYQQAVQYARDRVQSRPVDGSLPGSAP 337

Query: 354 VMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           ++            RA+ +    +A+  A ++  A+   +A +R E  A+   M P+ K 
Sbjct: 338 IIHHPDVRRMLMTMRALTEGCRAMASVAAAAYDAAHHHPDAAARKENQAFYEFMVPLVKG 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  +M+  V +  ++  GG G+IEE   A+HYR++
Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|170758768|ref|YP_001788163.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169405757|gb|ACA54168.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 635

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + + S  G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNIGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYSKERIQFGKPICHQQIIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365


>gi|120556795|ref|YP_961146.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326644|gb|ABM20959.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 606

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 44/329 (13%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M T  +H D        +   T  AP+ +      + LTE + GTD+  + ++ +  +DG
Sbjct: 135 MNTIYLHGD-------EQQQQTYLAPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEPQADG 187

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPN 268
            Y L+G K F+SS   D       I+LA++    +G  G   F+VP+ L D     G  N
Sbjct: 188 SYKLTGTKIFISSGEHDLTENIVHIVLARLPDAPKGTKGISLFIVPKFLPDAQGGVGERN 247

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +    L+ K+G +++AT  + F    G+L+G  N     +        + +AI  V   
Sbjct: 248 AVSCGALEKKMGIKASATCVMNFDGATGYLIGPENQGLECMFTFMNTARIGTAIQGVGPA 307

Query: 329 RVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSF- 374
            +S   A+ YA+ R              V+  ++    V +  +   A+     + L + 
Sbjct: 308 ELSYQWALDYAKERRSMRALSGKKEPDEVADSLIHHADVRRMLLTQKAIAEGGRSMLYYA 367

Query: 375 -RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            ++A+   EA +  + A   +       + PI K +  ++        M+  GG GYI E
Sbjct: 368 AKIADHMVEAHTAGDTAKVEKYDDKLGFLTPILKGFLTELGCEATNLGMQVFGGHGYIRE 427

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
             + +  R++   ++  G+     LD+L 
Sbjct: 428 HGMEQIVRDTRIATLYEGTTGIQALDLLG 456


>gi|327309819|ref|YP_004336717.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326955154|gb|AEA28850.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 591

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 38/310 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  +T++     DG Y +SG K F++S    ++D  + L         A  
Sbjct: 162 LTEPHCGTDLGLLTTRAVPRGDGAYRISGTKIFITSGDHDLTDNIVHLVLARTPDAPAGT 221

Query: 250 EGRVGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            G +  F VP  R+ +DG P   NG+    L++K+G   +AT  L F +  G L+G+ + 
Sbjct: 222 RG-ISLFAVPKRRITDDGEPGPANGVHCDGLESKMGLHGSATCVLRFDDAVGHLVGEESR 280

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQ 352
               +  M     L + +M++     +   A+ ++R R      G +         +IDQ
Sbjct: 281 GLAAMFVMMNGARLGTGVMALGVAETAGQAALAFSRERLQSRAPGSLHDPAQPADPIIDQ 340

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD---EAKS---RSEEAAYARIMAPITKYWCCK 406
           P ++R +      +  +    + L+   D   EA     R +      ++ P+ K +   
Sbjct: 341 PDVRRMLLTQQAWVGGSRLFLYWLSLQTDLRREATDLGVRVQADDLLSLLTPVAKAFVSD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
            A  V + AM+ +GG+GYI +  + +  R++    I  G+      D+L   ++  G   
Sbjct: 401 RAVEVSSLAMQVLGGAGYITDNGVEQSLRDARILPIYEGTNGVQAHDLLARKVIGDGGRR 460

Query: 465 FEQLFSTLEQ 474
            +QL   + Q
Sbjct: 461 MKQLLEMVSQ 470


>gi|321311473|ref|YP_004203760.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320017747|gb|ADV92733.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           BSn5]
          Length = 380

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 36/324 (11%)

Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           Y +A  E G    S  ++ A+ V+L  +P  +        + E   T+  P+   +    
Sbjct: 69  YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256
            GLTE   G+D     +Q + IS+G  Y ++G K ++++      +++  V G+   G  
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           ++  L+      GL      +K+G R + T E+   +       LLGD      P +  K
Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++I 
Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  +  + A   D  +  ++EAAYA++ A        +MA     +A++  GGSGY++E
Sbjct: 295 LARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             + R  R+  A  + +G G + +
Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369


>gi|169600779|ref|XP_001793812.1| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15]
 gi|160705514|gb|EAT89972.2| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15]
          Length = 927

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 126/266 (47%), Gaps = 30/266 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +++ DG Y L+G K W  + P +   ++ A+ E       +
Sbjct: 661 LAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKGI 719

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + D +  G    +  +K+G R + T EL F + F      LGD+N        +++L
Sbjct: 720 TAFIVDTTSKGFSITKKLDKLGMRGSNTGELVFDDVFVPKENTLGDIN------RGVRVL 773

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ SL   + Y  +R   G  +    +++  +AD+     A+
Sbjct: 774 MEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGYPIAHNQLVQGKLADMYTKFRAS 833

Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A ++ +A + DE+ +    R+++ A A +       +  + A  V A+A++ +GG GY+
Sbjct: 834 QAFTYSIARAVDESHADPVIRTQDCAGAIL-------YAAERASEVAADAVQLMGGMGYM 886

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            E  + R  R++    I  G+G + V
Sbjct: 887 NEVPVGRILRDAKLYEI--GAGTSEV 910


>gi|70729290|ref|YP_259027.1| hypothetical protein PFL_1908 [Pseudomonas fluorescens Pf-5]
 gi|68343589|gb|AAY91195.1| fadE13 [Pseudomonas fluorescens Pf-5]
          Length = 382

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 19/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A +  Q + + DG  Y LSG K F++S +   F  +A   G  G   +
Sbjct: 127 LAVTEPGGGSDVANL--QTRAVRDGDHYRLSGSKTFITSGVRADFYTVAVRTGEPGYGGI 184

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
             LL E G+P G    R   K+G  ++ T EL F +     G L+G  N+    +     
Sbjct: 185 SLLLVEKGTP-GFTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQ 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+M+    +++L E++ +AR R   G  +    V+K  +A++A  +  +   ++
Sbjct: 244 SERLALALMANMTSQMALEESLKWAREREAFGKPIAKFQVLKHRLAEMATALEVSREFTY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A      KS  +E + A+  A  T       A  +  +A++ +GG GY+ E  + R Y
Sbjct: 304 RQAAKMAAGKSVIKEISMAKNFATDT-------ADRITHDAVQILGGMGYMRESLVERLY 356

Query: 435 RESPANSIL-LGSGNAMVLD 453
           R+   N IL +G G   V++
Sbjct: 357 RD---NRILSIGGGTREVMN 373


>gi|270157370|ref|ZP_06186027.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289164236|ref|YP_003454374.1| acyl CoA dehydrogenase, short chain specific [Legionella
           longbeachae NSW150]
 gi|269989395|gb|EEZ95649.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857409|emb|CBJ11237.1| acyl CoA dehydrogenase, short chain specific [Legionella
           longbeachae NSW150]
          Length = 384

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 45/375 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+ ++ P   A+LR +   G+   +   + E +   Q  ++ +A L+   QL  
Sbjct: 26  PMADNWDEHDYFPI--AVLREAAALGMAGMM---AREDIGGAQLTRLDSALLF--EQLAT 78

Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           G + + +  S      S+V       +   W PK+ S E             V     LT
Sbjct: 79  GCISTSAYLSIHNMVTSLVDRYAHSELRTQWGPKLTSME-------------VLASYCLT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D A++ ++  K  D  Y L+G K F+S   +SD ++ + +        +   L+
Sbjct: 126 EPESGSDAASLKTKAVKDGD-YYVLNGSKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKIL 315
           E  +P GL + +L+ K+G RS  T  + F N        +GD      ++   +   +I 
Sbjct: 185 EKDTP-GLSFGKLEKKMGWRSQPTCIVYFENCRIPIANRVGDEGMGFKIALNALNGGRIN 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           I    A  S+ G    L     Y   R   G  L +   ++   AD+  D  AA  + +R
Sbjct: 244 I----ASCSLGGALACLRLTQAYMHERKQFGKPLSEMQALRFYFADMLTDYEAARLMVYR 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            AN+ D+ +          +   + K +   +A  +  +AM+  GG GY+ +  I R +R
Sbjct: 300 AANAMDKNEPN------VPMYCAMAKRFATDVAFRISDKAMQIHGGYGYLRDYQIERIFR 353

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 354 DLRVHQILEGTNEIM 368


>gi|161522396|ref|YP_001585325.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189348728|ref|YP_001941924.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345949|gb|ABX19033.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189338866|dbj|BAG47934.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 596

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDG+    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + PI K W  +M   V 
Sbjct: 348 LGTMRGLTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  +   L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|169342202|ref|ZP_02863287.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|169299686|gb|EDS81743.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
          Length = 378

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + +  +K  D  Y L+G K F++ +P+S  FI+ A  +   G   +
Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGSKGL 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G+   ++++K G +S    E+ F++    ++   N+     +  KI +  
Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEGDGFKIAMKT 237

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  +
Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E K  S  AA A+++       C   A  V  EA++ +GG+GY+ E  + R
Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 351 MMRDAKITQIYEGT 364


>gi|16078887|ref|NP_389708.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309717|ref|ZP_03591564.1| hypothetical protein Bsubs1_10061 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314039|ref|ZP_03595844.1| hypothetical protein BsubsN3_10002 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318961|ref|ZP_03600255.1| hypothetical protein BsubsJ_09916 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323235|ref|ZP_03604529.1| hypothetical protein BsubsS_10037 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669137|sp|O34421|ACDC_BACSU RecName: Full=Probable acyl-CoA dehydrogenase YngJ
 gi|2266423|emb|CAA74221.1| yngJ [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634209|emb|CAB13709.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 380

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 36/324 (11%)

Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           Y +A  E G    S  ++ A+ V+L  +P  +        + E   T+  P+   +    
Sbjct: 69  YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256
            GLTE   G+D     +Q + IS+G  Y ++G K ++++      +++  V G+   G  
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           ++  L+      GL      +K+G R + T E+   +       LLGD      P +  K
Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++I 
Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  +  + A   D  +  ++EAAYA++ A        +MA     +A++  GGSGY++E
Sbjct: 295 LARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             + R  R+  A  + +G G + +
Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369


>gi|89092176|ref|ZP_01165131.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083911|gb|EAR63128.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 592

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 176/397 (44%), Gaps = 74/397 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ A+    + ++ + + PK+ S E+  T             + LTE   GT
Sbjct: 125 LCPLLTQGAIEAIEAHGSEQLQQFYLPKLISGEWTGT-------------MNLTEPDAGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257
           D+AA+ ++     D  Y ++G K F++     M+D  + L           V+G +  F+
Sbjct: 172 DLAALKARAVPEGDH-YRITGQKIFITWGDHQMTDNIVHLVLARLPDAPPGVKG-ISLFV 229

Query: 258 VPRLLEDGSPNG-LCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
           VP+ L D   NG L  +R       L++K+G   + T  + F       G+L+G+ N   
Sbjct: 230 VPKFLLD--ENGELTDKRNDAYAVALEHKLGIHGSPTCVMSFGENEGAIGYLVGEENNGL 287

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI-------LIDQPV 354
             +  M     ++ A   V    ++++E     A+ YA+ R V G +       +I+ P 
Sbjct: 288 ACMFTM-----MNDARQGVGLQGLAISERAYQHALAYAKDR-VQGTLRDGSRITIINHPD 341

Query: 355 MKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +     A  AL++      D       A+ +++  A   ++ PI K W  ++A
Sbjct: 342 VRRMLMQMKAGSQAMRALTYVAKAESDYYHNATCAEQKAQHKARTELLTPIVKGWITELA 401

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLF 465
             +    ++  GG G+IEE   A+HYR++   +I  G+     LD++    L++ G  L 
Sbjct: 402 QEITYLGVQIHGGMGFIEETGAAQHYRDARILTIYEGTTGIQALDLIGRKTLVDNGAAL- 460

Query: 466 EQLFSTLEQDLGSSG----KKVITILRDSISLCKEDK 498
             L   ++ DL +      + V+   +D ++  KE K
Sbjct: 461 TALLDEIQGDLNAISSPELQDVVESFQDVLNEAKEAK 497


>gi|302504910|ref|XP_003014676.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371]
 gi|291177982|gb|EFE33773.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371]
          Length = 610

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 23/244 (9%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 225

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           +V R   D  P G L    +KNK   R++ T  ++  N     + + N+       +   
Sbjct: 226 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNC---PVPETNMFPEVTGLVGPF 279

Query: 316 IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAA 369
             L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D A  
Sbjct: 280 TCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDAAYG 339

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +E  
Sbjct: 340 TLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASDEYH 392

Query: 430 IARH 433
           I RH
Sbjct: 393 IGRH 396


>gi|317402923|gb|EFV83463.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 608

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 50/282 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE + G+D+A + ++  +  DG Y LSG K F++    D       ++LA+      
Sbjct: 161 MNLTEPQAGSDLAQVATRAVRQEDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPP 220

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------T 294
            V+G +  F+VP+ L   DGS    N +    L++K+G   + T  L + +         
Sbjct: 221 GVKG-ISLFIVPKFLVGADGSLGPRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEAGEGA 279

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVS 345
            G+L+G+LN     +E M   I +++A  SV    + ++E     A+ YAR R     V 
Sbjct: 280 VGYLVGELNRG---LEYM--FIMMNAARYSVGQQGIGVSERAYQHALAYARERVQGRAVE 334

Query: 346 GG----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARI 395
           G      +   P ++R +  +     AA A+S+  A + D+       + R+   A+   
Sbjct: 335 GSSAAVAIARHPDVQRMLLTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRARNRAFYEY 394

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           M P+ K +  + A  V +  ++  GG GYIEE   A++YR++
Sbjct: 395 MVPVVKGFATESAVEVASLGVQVHGGMGYIEETGAAQYYRDA 436


>gi|330468024|ref|YP_004405767.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810995|gb|AEB45167.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 380

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 17/266 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E +GG+D AA+T++  +  D  Y ++G K +++   +  F  +    G  G   +  L
Sbjct: 126 LSEPQGGSDAAALTTKAARDGDE-YVVTGTKAWITHAHTADFYNIFCRTGGPGPKGISCL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320
           L D +  G+  Q  +  +G RS+   +L F +    +  D  +  G  +   I +  LDS
Sbjct: 185 LADRATPGIAPQTAERTMGLRSSPVAQLVFDDAR--VPADRLIG-GEGKGFTIAMAALDS 241

Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   V LA+A     + YAR R   G  +I+   +   +AD+A  I+AA AL+  
Sbjct: 242 GRLGIAACAVGLAQAALDYAVTYARERQQFGRAIIEFQGLGFTLADMATQISAARALTLA 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  S EAA A++ A         +A  V  +A++ +GG+GY+ +  + R++R
Sbjct: 302 AARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYFR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           E+    I+ G+     + +   L KG
Sbjct: 355 EAKVLQIVEGTNQIQRMVISRALAKG 380


>gi|190575063|ref|YP_001972908.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190012985|emb|CAQ46617.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 382

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 18/258 (6%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           AIG   LTE + G+D  A+  +  K +DG + ++G K W  S P++   ++ A  E   G
Sbjct: 119 AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVLFAMSEPDKG 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   L D    G    + + K+G R++AT E+EF++   ++    +V     E  KI
Sbjct: 179 ARGITAFLIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAQAEDVLGQEGEGFKI 235

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD+  + ++   + +A A     + Y + R   G  +    + +  IAD+   + A
Sbjct: 236 AMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKIADMKCKLDA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+ R A    + K  S EAA A++ A     W       +  +A++  GG GY +E 
Sbjct: 296 ALLLTLRAAWVKGQGKRFSTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEM 348

Query: 429 SIARHYRESPANSILLGS 446
            + R++R++    I  G+
Sbjct: 349 PLERYFRDAKITEIYEGT 366


>gi|284030163|ref|YP_003380094.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283809456|gb|ADB31295.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 381

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 29/292 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           + T    + W PK  S E             +   +G+TE  GG+D+A + +  +K+ DG
Sbjct: 103 LGTEEQKQRWLPKFCSGE-------------LIAAIGMTEPSGGSDLAGLRTSAKKV-DG 148

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  M+D  I   + +   G   +     +   +G    R  +K+G   
Sbjct: 149 GWVLNGSKTFITNGDMADLTITAVRTDPSKGAKGITLFAVEQGMHGFARGRKLDKVGQTE 208

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
           + T EL F + F     +LG+  V  G +  M+ L    + +A+ +++     LAE I Y
Sbjct: 209 SGTSELFFEDVFVPEENVLGE--VDRGFIHMMERLAQERVGAAVSNIAHATQILAETIEY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++R   G  +      K  IA++        A       + DE +  + +AA A     
Sbjct: 267 VKQRKAFGQPVGSFQYNKFLIAELVTKAEVTQAYVDNAIVAHDEDRLTAVDAAKA----- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             K+W  ++   ++   ++  GG GY+ E  +AR +R++    I  GS   M
Sbjct: 322 --KWWSAQVQNEILDACVQLHGGYGYMNEYRVARAWRDARVTKIWAGSNEIM 371


>gi|260904523|ref|ZP_05912845.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 378

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 24/279 (8%)

Query: 183 YDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
           + P  +A   P   T   +G   L+E   G+D+A I  +  +  DG + ++G K W   +
Sbjct: 94  FSPEQEARLLPKVATGEYLGAFALSEAEAGSDVANIRCKATRADDGGWVINGTKMWCTFA 153

Query: 238 PMSDAFIMLAQV----EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +D  I+ A+     E R   +  FLV +   +  P G+    +K KIG     T +L 
Sbjct: 154 DQADYIILFARTSTDEEKRHRGISAFLVEKNRGE-FPEGMSGTAVK-KIGYFGWKTWDLN 211

Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F +       LLG+             +    +A  S+   + +L ++I Y ++R   G 
Sbjct: 212 FDDFHLPADALLGEEERGFYQAVSGLEVGRAHTAARSIGLAQAALEDSIAYLKQRVQFGH 271

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D   ++  +AD+A  I A+ AL + +    D      +EAA       + KY   +M
Sbjct: 272 PLADFQHLRFKVADMAAQIEASRALMYHVCTQIDSGARCDKEAA-------MVKYLAAEM 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A  V +EA++  GG+GY ++ ++ RH+R++    I  GS
Sbjct: 325 AEKVTSEAVQIHGGAGYTKDFAVERHWRDARLTKIFEGS 363


>gi|330892469|gb|EGH25130.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 503

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 77  LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 136

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 137 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 196

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 197 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 255

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 256 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 315

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 316 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 375

Query: 466 EQLFS 470
            QLFS
Sbjct: 376 YQLFS 380


>gi|109090817|ref|XP_001104844.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
 gi|67971122|dbj|BAE01903.1| unnamed protein product [Macaca fascicularis]
          Length = 432

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 39/275 (14%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWVSSAEYAGLFLVMANV 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  +G   +   + D    GL   + +NK+G R+++T  L F N               V
Sbjct: 224 DPTIGYKGITTFIVDRDTPGLHIGKPENKLGLRASSTCPLTFENV-------------KV 270

Query: 310 EDMKILIYL----DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQP 353
            + KIL  +      AI S++  R+ +A              I Y + R   G  L D  
Sbjct: 271 PEAKILGQVGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQ 330

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A +A  + AA  L++  A   +  K   +EA+ A       KY+  ++A    +
Sbjct: 331 GLQHQVAHMATQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTS 383

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +E +GG GY ++  + +++R++   +I  G+ N
Sbjct: 384 KCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASN 418


>gi|73995317|ref|XP_534712.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short-chain specific,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Canis familiaris]
          Length = 404

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  Q   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 144 FALSEPGNGSDAGAASTTAQADGDA-WILNGTKAWITNSWEASAAVVFASTDRSLQNKGI 202

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             FLVP        +GL   + ++K+G R+++T  L F +       LLG+      P  
Sbjct: 203 SAFLVPM-----PTSGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 251

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL
Sbjct: 252 GFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 311

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D+ +  ++EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 312 ALESARLLTWRAAMLKDKKQPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 364

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 365 VTEMPAERHYRDARITEIYEGT 386


>gi|15807914|ref|NP_285573.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460683|gb|AAF12388.1|AE001863_13 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 637

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 46/377 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + L+E + G+ +A IT+      DG Y ++G K ++S    +       ++LA+++G   
Sbjct: 200 MALSEPQAGSGLADITTTATLRDDGTYSITGTKMWISGGEHELTENIVHLVLARIKGAPA 259

Query: 253 ----VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  FLVPR  +  DGS    N +    L +K+G+R      L F     T G L+G
Sbjct: 260 GVKGISLFLVPRYRINPDGSVGESNHVVLAGLNHKLGHRGTTNTLLNFGEGGETIGELVG 319

Query: 301 DLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349
           +       +  M    +I + + + +   +G   SL  A    + RH S          +
Sbjct: 320 EPGRGLAQMFHMMNEARIGVGMGAVMSGYAGYLASLEYARDRRQGRHASNRDPQAESVAI 379

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWC 404
           I+   +KR +    + +    AL    A+  D+  +  EE     A    ++ PI K W 
Sbjct: 380 IEHADVKRMLLRQKVFVEGGLALGLYAASLVDDLNTGPEEEKADTALLLDLLTPIVKSWP 439

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGT 462
            K +   +++A++ +GG+GY  +  +  +YR++  N I  G+      D+L   L +   
Sbjct: 440 SKYSQEALSDAIQVMGGAGYTRDTPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKLTQANG 499

Query: 463 NLFEQLFSTLEQDLGSSGKK-----VITILRDSISLCKEDKG--LARF--LTEKIALASS 513
              + L   +  DL ++ ++     + T L+++I  C    G  L R   L   + LA++
Sbjct: 500 RGLQVLLGKMGADLKAAEQEGELSDIRTALQEAIGQCAAALGSLLGRAAELGPDLFLANA 559

Query: 514 AAALYRAGMNDIADVFL 530
            AAL   G   +  ++L
Sbjct: 560 NAALDMVGHTVVGWMWL 576


>gi|154248365|ref|YP_001419323.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162450|gb|ABS69666.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 626

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249
           LTE   GTD+  + ++ +   DG Y ++G+K F+S+   D       ++LA+       +
Sbjct: 194 LTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIHLVLARLPDAPKGI 253

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+ L  EDGS    NG+    +++K+G   ++T ++ F    G+L+G+   
Sbjct: 254 KG-ISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGE--- 309

Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQP- 353
              P + M+ +   ++S  +SV    + L EA + A         + R +SG    D+P 
Sbjct: 310 ---PHKGMRAMFSMMNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPA 366

Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                        +  RA  +    +A   A +  L    ++A+ R     +  +M PI 
Sbjct: 367 DPIIVHPDVRRTLMTMRAYNEGCRALAGWVARALDLMEHAEDAQERQRAEDFTALMTPIV 426

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K     +     +  M+  GG GYI +  + ++ R++    I  G+     LD++ 
Sbjct: 427 KALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDLVG 482


>gi|152975579|ref|YP_001375096.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152024331|gb|ABS22101.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 381

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y ++G K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVINGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP + E     GL      +K+G R++ T E+   +       +
Sbjct: 171 VNGVDENGRKRISAFIVPTISE-----GLTISSPYDKMGVRASNTCEIVLEDVRVPRENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERKQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A +I  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEIELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIS 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + V
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEV 369


>gi|313496736|gb|ADR58102.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405
            ++R +  +   I    A S  +A   D AK         RSEE     ++ P+ K +  
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +         +  GG GYI E    +  R+     I  G+     LD++ 
Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454


>gi|116748841|ref|YP_845528.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697905|gb|ABK17093.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 619

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 158/393 (40%), Gaps = 69/393 (17%)

Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           LM P +T  S+ ++    T  + + +  K+++ E+  T             + LTE   G
Sbjct: 123 LMYPGLTHGSSRLLEKYGTSELKETYLYKMYAGEWSGT-------------MCLTEPDAG 169

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           +D+  + ++ +++ DG Y + G K F+S  M D       ++LA++EG       +  F 
Sbjct: 170 SDVGNLRTRAKRLPDGTYSIRGQKIFISCGMHDLTDNIIHMVLARIEGAPKGVRGISIFA 229

Query: 258 VPRL--LEDG--SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           VPRL   E G  + N +    L++K+G    AT  + F       G+LLG  N     + 
Sbjct: 230 VPRLRVTETGELAENDVVCTGLEHKLGIHGAATCTMNFGENERCVGYLLGKENTGMRIMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRA 358
           +M     L + +  +     +   A++YA+ R     I            +I  P ++R 
Sbjct: 290 EMMNEARLFTGLQGLGHASAAYLHALNYAKERRQGALIQHMKHPETPRVPIIRHPDVRRM 349

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVI 412
           +  +        AL        D +++   E        YA ++ P+ K     +   V 
Sbjct: 350 LMFMKSSTEGLRALMHLGGYCIDRSRAAEAEEEKELFQGYADLLIPLCKSVGSDLGFRVC 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LLEKGTN 463
             A++  GG GY+ E  + +  R+    SI  G+     LD++          L++   N
Sbjct: 410 ETAIQVYGGYGYVTEYPVEQFLRDCKIASIYEGTNGIQALDLVGRKLTYRRGLLVKNALN 469

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             E + S + ++           LRD + + +E
Sbjct: 470 AIENILSRIRRNFS---------LRDLVRIYEE 493


>gi|28867735|ref|NP_790354.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28850970|gb|AAO54049.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLAALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N    
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465

Query: 467 QLFS 470
           QLFS
Sbjct: 466 QLFS 469


>gi|148556505|ref|YP_001264087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148501695|gb|ABQ69949.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE   G+D AA+ ++  + ++G + L+G K F++S       M+  V     G+ G   
Sbjct: 123 LTEADAGSDAAALRTRATR-AEGGWVLNGAKQFITSGKIAGVAMVFAVTDPAAGKKGISA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGP 308
           FLVP      SP G    ++++K+G  ++ T  + F + F   G L G      N++   
Sbjct: 182 FLVP----TDSP-GYAVDKVEHKLGQAASDTCAIRFDDLFVEDGLLFGAEGRGYNIALAN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I      M+ + + +++A    YAR R   G  +I+   +   +AD+A  + A
Sbjct: 237 LEQGRIGIAAQCVGMAQAALEIAVA----YARDRRSMGKPIIEHQAVGFRLADLATRLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A+  D      +EA+ A++ A        + A A+++ A++ +GG GY+EE 
Sbjct: 293 ARQLVLHAASVKDAGLPCLKEASMAKLFA-------SEAAEAIVSGAIQTLGGYGYLEEF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            +A+ YR+     I  G+ +
Sbjct: 346 GLAKIYRDVRVCQIYEGTSD 365


>gi|284042015|ref|YP_003392355.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946236|gb|ADB48980.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 382

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG--CFLV 258
           L+E   G+D  A+ ++ ++  DG        W      +D + + A+  EG  G  CFL 
Sbjct: 127 LSEADAGSDPGAMRARAKRDGDGFRVTGSKAWVTHGGEADFYTLFARTGEGSRGISCFLA 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
           P     G   GL  Q  + K+G   + T  ++F +     L    +     E + I L  
Sbjct: 187 P-----GQAGGLTSQSPERKMGLTGSTTATVDFDDV---ALERDRLVGAEGEGLAIALQA 238

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA+A     + +AR+R   G  +I+   +   +AD+A  + +A A 
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDHAVDHARQRQTFGKPIIEHQGLGFLLADMAAAVESARAT 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D     S  AA A+++A          A  V  +A++ +GG+GY ++  + R
Sbjct: 299 MLEAARRRDRGLPFSRHAAIAKLVA-------TDAAMQVSTDAVQVLGGAGYTQDFPVER 351

Query: 433 HYRESPANSILLGS 446
             RE+    I  G+
Sbjct: 352 MMREAKVMQIFEGT 365


>gi|146296802|ref|YP_001180573.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410378|gb|ABP67382.1| butyryl-CoA dehydrogenase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 381

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D++ I +  +K  D  Y L+G+K W  +   +D +++ A  +   G   +
Sbjct: 122 FALTEADAGSDVSNIKTVAEKNGD-FYILNGNKHWITNGGEADIYVVFAVTDKSKGPRGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G  + + ++K+G R+++T EL F N       LLG     TG +  MK  
Sbjct: 181 SAFIVEKGYEGFYFGKKEDKMGIRASSTTELVFENCKVPKENLLG--REGTGFIIAMKT- 237

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+ M V +A+     A+ YA+ R   G  L     ++  +AD+ ++I AA 
Sbjct: 238 --FDRTRPGVAAMAVGIAQGAYEHALKYAKERVQFGQPLSSFQAIQHMLADMYINIEAAR 295

Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL +      D  AK  ++E++  ++ A         +A  V  +A++ +GG+GY+++  
Sbjct: 296 ALLYSTCKMIDSGAKDYTKESSACKVFAS-------DVAMKVTIDAVQIMGGNGYVKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 349 VEKMMRDAKVTQIFEGA 365


>gi|72160614|ref|YP_288271.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71914346|gb|AAZ54248.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 607

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 62/356 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAIKQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGHGPGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  FLVP+ L  EDGS    NG+    ++ K+G + + T EL F       G+L+GD 
Sbjct: 224 KGLSLFLVPKYLVNEDGSLGERNGVYVTNVEEKMGLKVSTTCELTFGAKHPAIGYLVGDK 283

Query: 303 NVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQ------- 352
           +     +  M ++I     ++   +++ +      A+ YA+ R V G  L  Q       
Sbjct: 284 HDG---IRQMFLIIEYARMMVGTKAIATLSTGYLNALAYAKER-VQGADLTQQADKTAPR 339

Query: 353 ------PVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMA----PI 399
                 P ++R++        A  AL    A   D    A +R E+ A    M     P+
Sbjct: 340 VTITHHPDVRRSLMLQKSYAEAMRALVLYTATFQDAVQIATARGEDPAEYEAMNDLLLPL 399

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    + + A++AE+++ +GGSGY+++  I ++ R+S  +++  G+     +D+     
Sbjct: 400 VKGVGSERSYALLAESLQTLGGSGYLQDYPIEQYIRDSKIDTLYEGTTAIQGMDL----- 454

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
                F ++     Q LG        ++ +     K D G  +   E   LA +AA
Sbjct: 455 ----FFRKIVKNNGQALGK-------LMGEIQEFAKSDPGNGQLKNECALLAQAAA 499


>gi|326381424|ref|ZP_08203118.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199671|gb|EGD56851.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 391

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 28/297 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MV    TP   K W P + S E            S+A    LTE   G+D AA+++  ++
Sbjct: 97  MVDTYGTPEQRKRWVPAMASME------------SIA-SYCLTEPGAGSDAAALSTSARR 143

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + L G K F+S   +SD ++++A+        +   ++E G+P GL +   + K+
Sbjct: 144 DGD-HFVLRGSKQFISGGGVSDVYVVMARTGDAGARGISTFVVEKGTP-GLSFGPPEAKM 201

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
           G  +  T ++ F +        L G     TG    M  L    L+ A  S+ G + +  
Sbjct: 202 GWHNQPTAQVVFDDVRVPADAMLGGPDGQGTGFSIAMNGLNGGRLNIAACSMGGAQSAYD 261

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A+ YA  R   GG LI +P +   +A++A  + A+  + +R A + D       E    
Sbjct: 262 QALVYATEREAFGGPLIAEPTIAATLAEMATSLEASRLMLWRAAEALDADDPDKVE---- 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +  + K +  +    V  +A++  GG GY+ E  I +  R+   N IL G+   M
Sbjct: 318 --LCAMAKRFVTENCFTVADQALQLHGGYGYLHETGIEKIVRDLRVNRILEGTNEIM 372


>gi|298489175|ref|ZP_07007195.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156312|gb|EFH97412.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|257077075|ref|ZP_05571436.1| acyl-CoA dehydrogenase, short-chain specific [Ferroplasma
           acidarmanus fer1]
          Length = 377

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 22/257 (8%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           GL +TE   G+D A+I+++ +K   G Y ++G K F+S+  ++  F+M A  +   G   
Sbjct: 118 GLAITEPGSGSDAASISTRAEKCEGG-YKITGTKTFISNGRIAKFFVMDASTDKSKGYKG 176

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + DG+  GL   R  +K+G R ++TVEL F   F     ++G+ N     + D   
Sbjct: 177 ITTFVVDGNAPGLEISRDIHKMGIRGSSTVELNFHEVFVPESNIVGEYNKGFSVIMDT-- 234

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD+  + ++   + +A     EA+ Y   R      +ID   ++  IA++   I A+
Sbjct: 235 ---LDAGRIGIAAQALGIARSAFHEALEYINTRKQFNKKIIDFQGIQFMIAEMESRIKAS 291

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A  +   +   E       ++ I K +    A  V   +++  GG GY  + +
Sbjct: 292 DLLIREAAEKWQNHEDTVE-------LSSIAKMYASDTAVYVAERSLQLFGGYGYTTDFN 344

Query: 430 IARHYRESPANSILLGS 446
             RH R++    I  G+
Sbjct: 345 AERHMRDAKITQIYEGT 361


>gi|121605030|ref|YP_982359.1| acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
 gi|120593999|gb|ABM37438.1| Acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
          Length = 386

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 35/283 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP    D+ PK+ S E             + +   LTE   G+D A++ ++ +   D  Y
Sbjct: 102 TPEQKSDYLPKVASGE-------------LVMSFALTEPDAGSDAASLKTRAELDGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            LSG K F++ +P + AF ++A+      G V  F+VP  L      G+   +   K+G 
Sbjct: 148 VLSGTKRFITNAPRAGAFTLMARTGGPGAGGVSSFIVPADLP-----GIKLGKTDKKMGQ 202

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334
           R   T ++   N     +   N+  G P +  K  +  LD   +++S +   +A     E
Sbjct: 203 RGTKTCDVILENV---RVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVACGMAQRILEE 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YAR R   G  + +  +++  +AD   ++ A  +L   +A  FD   +   +   + 
Sbjct: 260 SVGYARDRKQFGKAIGEFQLIQAMLADSQAELLAGWSLVQDVARRFDGKPAHVSDPDIS- 318

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +     K +C +M   V    ++  GG+GYI E  + R YR+S
Sbjct: 319 MRVSCAKLFCTEMVGRVADRGVQVHGGAGYINEYPVERFYRDS 361


>gi|134299636|ref|YP_001113132.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134052336|gb|ABO50307.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
          Length = 379

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           LGLTE   G+D  A+  +   + DG  Y L+G+K F+++   +D ++++A  +       
Sbjct: 123 LGLTEPGAGSD--AVGQKTTAVLDGDEYVLNGNKIFITNGYYADTYVIIAVTDKSKKSKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E G+P G  + + ++K+G R++AT EL F N       LLG+           +
Sbjct: 181 ISSFIVEKGTP-GFSFGKKEHKMGIRASATYELVFENCRIPKANLLGEEGQGF-----KQ 234

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +++ LD   + ++   + +A+     AI Y++ R   G  +     ++  +AD+A  + A
Sbjct: 235 VMMTLDGGRIGIASQALGIAQGALDAAIEYSKIREQFGKPISANQGLQWMMADMATQVEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + ++ A   D     S+EAA A++ A  T       A AV  +A++  GG GY  E 
Sbjct: 295 ARLMVYQAAYRKDNKMPYSKEAAMAKLFAAET-------AMAVTTKAVQIFGGYGYTREY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 PVERMMRDAKITEIYEGT 365


>gi|238059069|ref|ZP_04603778.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237880880|gb|EEP69708.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 381

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 19/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E +GG+D AA+T++   + DG  Y ++G K W   + ++D + +  +  G  G   + 
Sbjct: 126 LSEPQGGSDAAALTTR--AVRDGEAYVVTGTKAWITHARVADFYNIFCRTGG-PGPKGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            LL D    G+  Q  +  +G  ++   ++ F +    +  D  +          +  LD
Sbjct: 183 CLLADRDTPGIVPQAAERMMGLHASPVAQIAFDDAR--VPADRLIGGEGAGFTIAMSALD 240

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           S  + ++   V LA+A     + YAR+R   G  ++D   +   +AD A  ++AA AL+ 
Sbjct: 241 SGRLGIAACAVGLAQAALDHAVGYARQRQQFGRAIVDFQGLGFLLADAATQVSAARALTL 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +  S EAA A++ A         +A  V  +A++ +GG+GY+ +  + R+ 
Sbjct: 301 HAARLRDAGRPYSTEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYL 353

Query: 435 RESPANSILLGS 446
           RE+    I+ G+
Sbjct: 354 REAKVLQIVEGT 365


>gi|157375429|ref|YP_001474029.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317803|gb|ABV36901.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 585

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 36/297 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRNIRTKAVPNDDGSYNITGSKIFITGGDHDLTENVIHLVLAKLPDSNG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  NG+    +++K+G +++AT  + + +  G+L+G  N   G
Sbjct: 224 ISLFLVPKIKVDDSGNLGESNGVTVGSIEHKMGLKASATCVMNYDDAQGYLIGRPN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG         IL+  
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATCDPILVHG 340

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKM 407
            V +R + +I     A  ALS       D     E + +++ A Y  ++ P+ K +    
Sbjct: 341 DV-RRMLLNIRTLTEAGRALSILTGKQLDIAKYGEGEDKAKAARYVGLLTPVAKAFLSDR 399

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                  A +  GG GYI E  I +  R++    I  G+     +D L     G NL
Sbjct: 400 GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456


>gi|291562703|emb|CBL41519.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SS3/4]
          Length = 383

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 26/270 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKYADTYIVIA 170

Query: 248 -----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                +  G++   +   ++E G+P G  +   + K+G R +AT EL F++     +   
Sbjct: 171 VTGTVEKRGKMQKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDC---RIPKD 226

Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
           N+     E  KI ++ LD   + ++   + LAE      I Y + R   G  +      +
Sbjct: 227 NLLGKKGEGFKIAMHTLDGGRIGIAAQALGLAEGALDRTIAYVKERKQFGRTIGQFQNTQ 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  + +R A +    K+ S EAA A++       +  ++A  V  +A+
Sbjct: 287 FQLADMATKVKAAQMMVYRAAMAKATQKTYSVEAAMAKL-------YAAEVAMEVTTKAV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI E  + R  R++    I  G+
Sbjct: 340 QLHGGYGYIREYDVERMMRDAKITEIYEGT 369


>gi|152997029|ref|YP_001341864.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150837953|gb|ABR71929.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 592

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 142/323 (43%), Gaps = 55/323 (17%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + + + PKI S E+              + + LTE   G+D+ A+ ++     DG Y + 
Sbjct: 144 IQQRYLPKIVSGEW-------------TVAMALTEPNAGSDLGALNTKAVPQQDGTYKIK 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--RLLEDGSPNGLCYQR-- 274
           G K +++    D     A ++LA+          +  F+VP  R+ +DGS  G    R  
Sbjct: 191 GQKIYITYGDHDLTDNIAHLVLARTPDAPAGSRGISLFIVPKYRVSDDGSLGGFNDVRCT 250

Query: 275 -LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G   + T  + + +     G L+G+LN        M + + ++ A +S     V
Sbjct: 251 GIEHKMGLHGSPTCSISYGDQDDCVGELVGELNQGL-----MAMFVLMNEARLSCGLQGV 305

Query: 331 SLAE-----AIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +L E     A+ YA+ R            +++   +KR + ++  +  A  AL +++A  
Sbjct: 306 ALGELGYQRALEYAKERTQGTNAQGEKVAIVEHADVKRMLLEMRSETFALRALGYQIAAQ 365

Query: 380 FDEA-----KSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            D       K+ S ++   R+  + PI K +  +    +  + ++  GG G++EE  +A+
Sbjct: 366 IDATESAVDKTESNQSKKDRVALLTPIFKAFATERVNVMAGQVIQVFGGMGFVEETGVAQ 425

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
             R++   +I  G+      D++
Sbjct: 426 IMRDARITTIYEGTTGIQARDLM 448


>gi|116626102|ref|YP_828258.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229264|gb|ABJ87973.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 381

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC--FLV 258
           LTE   G+D A   +  +    G + L+G K F ++   +D  + +A V  R      + 
Sbjct: 125 LTEPEAGSDAAGTRTHAETDESGGWVLNGSKTFTTNAHYADVCVAMA-VTDRAAAQHGIS 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKIL 315
             L+E  +P   C ++ +NK+G R++AT E+ F N   G   LLG LN   G V  +K+L
Sbjct: 184 AFLIEKDTPGYRCGKK-ENKLGLRASATGEVIFENCRLGPTQLLGKLN--DGFVASLKVL 240

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D   +S++ + + +A+     A+ Y++ R   G  + +   ++  + D+A+D+ AA 
Sbjct: 241 ---DGGRISIAALSIGMAQGAYDAALRYSKLRKQFGRPISEFQAIQHKLVDMAVDLDAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A   D     + E++ A++ A        + A  +  EA++  GG G+I++  +
Sbjct: 298 LLNYRAAWMLDRGMRVTRESSMAKLFA-------SEAAVRIAGEAVQIHGGYGFIKDYPV 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + YR+    +I  G+     L +   L K
Sbjct: 351 EKFYRDVKLCTIGEGTSEIQRLVIARQLLK 380


>gi|312958586|ref|ZP_07773106.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311287129|gb|EFQ65690.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 600

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 53/338 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247
           + LTE   G+ ++ I ++ +  +DG Y L G+K F+S    P+S+  + +         A
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F    N  G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGARNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352
           G     L+     + + +I + + + ++  +G   SL     YAR R    G L D    
Sbjct: 281 GKPHQGLSCMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334

Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
              PV              ++A  + A D+    A  F    + D    R +      ++
Sbjct: 335 ATAPVSIIQHADIKRMLLTQKAYVEGAFDLGLYAARLFDDTTTLDTETERKQAHELLDLL 394

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
            PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L 
Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454

Query: 456 -NLLEKGTNLFEQLFSTLEQDLGSSGK-KVITILRDSI 491
             L + G    +QL   + +    + K   +T LR  +
Sbjct: 455 RKLAQNGGAGLKQLIRLIAETAARAQKYPSLTALRTPL 492


>gi|312963448|ref|ZP_07777930.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311282254|gb|EFQ60853.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 589

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 47/338 (13%)

Query: 152 MSPSVTSASMVALMTTPRV-HKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +M A+     V  KD +  K+ + E+  T             + LTE   GT
Sbjct: 125 MYPGLTHGAMSAIHAHGTVEQKDTYLNKLTAGEWTGT-------------MCLTEAHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257
           D+  I ++    +DG Y ++G K F+S+    MS   I L         A  +G +  F+
Sbjct: 172 DLGLIKTRAVPQADGSYAVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKG-ISLFI 230

Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           VP+   D G  N +    +++K+G +++AT  L F    GFL+G+ N     +  M    
Sbjct: 231 VPKFHADSGERNAVHCGAIEHKMGIKASATCVLNFDGAKGFLIGEANKGLNCMFTMMNHA 290

Query: 317 YLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ---PVMKRA-IADIALDIAA 368
            L + +  +     S   AI YA    + R ++G    D+   P++  A +  + L + A
Sbjct: 291 RLGTGMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPDKAADPIIVHADVRRMLLTMKA 350

Query: 369 AT----ALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
                 AL++  A   D      +A  R E       + PI K +  +    V    M+ 
Sbjct: 351 FNEGNRALTYLTAQLLDTAHLSSDAGQRQEAEDLLAFLTPICKAFMTETGLEVTNHGMQV 410

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GYI E  + +  R++    I  G+     LD+L 
Sbjct: 411 FGGHGYIREWGMEQLARDARIAPIYEGTNGIQALDLLG 448


>gi|187778569|ref|ZP_02995042.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC
           15579]
 gi|187772194|gb|EDU35996.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC
           15579]
          Length = 635

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D     +      D  Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAVLEGDN-YVLNGEKIFITNAGEADIYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + + S  G  + +  +K+G RS+AT EL        +L D+ V    
Sbjct: 172 TTPNIGTRGISAFIVEKSFQGFSFGKHYDKMGIRSSATAEL--------ILNDVKVPKEN 223

Query: 309 V-----EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++  
Sbjct: 224 LLGKEGEGFKIAMSTLDGGRIGIAAQAIGIAQGAYENALEYSKERIQFGKPICHQQIIAF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++
Sbjct: 284 KLADMATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GGSGY++   + R YR++   +I  G+
Sbjct: 337 IFGGSGYMKGMEVERAYRDAKICTIYEGT 365


>gi|255527687|ref|ZP_05394545.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296185563|ref|ZP_06853972.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255508631|gb|EET85013.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296049691|gb|EFG89116.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|308066799|gb|ADO12110.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 379

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 38/274 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD +A   Q Q I +G  Y L+G K F+++   +D F++ A
Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDSSA--QQSQAILEGDHYILNGQKIFITNGAYADVFVVFA 170

Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             +   G   +   +LE G P G  + +++NK+G R+++T EL F         D+ V  
Sbjct: 171 MTDRSKGNKGISAFILEKGMP-GFSFGKVENKLGIRASSTTELVFE--------DVKV-- 219

Query: 307 GPVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQ 352
            PVE++  K       A+ ++ G R+ +A            EAI Y + R   G  L   
Sbjct: 220 -PVENLIGKEGKGFAVAMKTLDGGRIGIAAQALGLAEGALDEAIKYMKERKQFGKTLSRF 278

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +A++ + I AA  L ++       A  R E      I A   K +  + A  V 
Sbjct: 279 QGLAWMVAEMDVKIEAARNLVYK-------AAMRKENGLPFTIDAARAKLFAAETAMEVT 331

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A++  GG GY ++  + R  R++    I  G+
Sbjct: 332 TKAVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365


>gi|114563210|ref|YP_750723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334503|gb|ABI71885.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 598

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 46/294 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y LSG K F+S+   D       I++A++ G     
Sbjct: 164 LTEPHCGTDLGMLRTKAELQADGTYSLSGTKIFISAGEHDLSDNIVHIVIARIPGAPEGN 223

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + EDG+    NG+    +++K+G   NAT  + F    G L+G+    
Sbjct: 224 KGISLFIVPKFNVNEDGTISDRNGVSCGSIEHKMGINGNATCVINFDGATGHLIGE---- 279

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------G 347
             P   +K +  ++++A + V+   V+ AE     A+ YA+     R +SG         
Sbjct: 280 --PNRGLKCMFTFMNAARIGVASEGVAAAEASFQGALAYAKDRLQMRSISGVKNPNGPAD 337

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITK 401
            +I  P ++R +           AL   LA   D   +  +EA  A       ++ PI K
Sbjct: 338 PIIVHPDVRRMLLTQKSIAEGGRALISYLAQLVDIGHAEKDEAIKADAETKLALLTPIAK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  ++     +  ++  GG G+I+E  + +  R++  + +  G+     LD+L
Sbjct: 398 AFLSELGFECTSHGVQIFGGHGFIKEWGMEQLMRDTKISCLYEGTTGIQALDLL 451


>gi|90422668|ref|YP_531038.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104682|gb|ABD86719.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 615

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 201/469 (42%), Gaps = 71/469 (15%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P W    +R I  G +    D +F       A       ++  + +  G  + P 
Sbjct: 92  KVTTAPGWPDAYQRWIAAGWNAVSGDEAFGGQGLPLALNAACTEIWAASNVAFG--LCPL 149

Query: 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T +++ AL    +  + K +  K+ S E+  T    MQ         LTE + G+D+ A
Sbjct: 150 LTLSAIEALDAHGSDALKKIYLEKLVSGEWPGT----MQ---------LTEPQAGSDVGA 196

Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLL 262
           + S+ ++  DG Y + G K F++     M+D  +  +LA++         +  FL+P+ L
Sbjct: 197 LRSRAERYGDGSYRIIGSKIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFL 256

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G  N +    +++K+G  +  T  +   +     G+L+G+ N     +  M  
Sbjct: 257 VNADGSLGERNDIYPTGIEHKLGMHAAPTCTMTIGDHGGAVGYLVGEENRGMQCMFTMMN 316

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKR------AI 359
              L   +  V     +  +A+ +A+ R     I         +I  P +KR      A+
Sbjct: 317 QARLAVGLEGVGIADRAYQQALAFAQDRKQGRAIGEKPSKSDPIIVHPDVKRMLLQMRAM 376

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
              A  I  ATA++  +AN  D+   ++  A  A ++ PI K +   +   V +  ++  
Sbjct: 377 TAAARTICYATAVAIDIANRSDDPAIKAAAATRAALLTPIAKAYATDIGNEVASLGVQVH 436

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLFEQLFSTLE 473
           GG G+IEE   A+H+R++    I  G+     +D++      N  E    L  +L +T++
Sbjct: 437 GGMGFIEETGAAQHFRDARITPIYEGTNGIQAIDLVTRKLAPNGGEAVWALISELSATVD 496

Query: 474 Q-------DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
           +         G++G K    LR++++  +     +++L E++  A + A
Sbjct: 497 EVEASNDPSFGTTGAK----LREALAALER---ASKWLLERVVSAPNDA 538


>gi|330807159|ref|YP_004351621.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375267|gb|AEA66617.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 600

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 48/312 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248
           + LTE   G+ ++ I ++ +  SDG Y L G+K F+S    P+S+  +  +LA+      
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPP 221

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344
           G     L+     + + +I + + + ++  +G   SL     YAR R             
Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQGRVPDSKDPTT 336

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398
           +   +I    ++R +      +  +  L    A  FD+  +   EA   R      ++ P
Sbjct: 337 APVAIIQHADVRRMLLTQKAYVEGSFDLGLYAARLFDDTTTLESEAERRRAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           I K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L   
Sbjct: 397 IVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQL 468
           L + G    +QL
Sbjct: 457 LAQNGGAGLKQL 468


>gi|153004998|ref|YP_001379323.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028571|gb|ABS26339.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 380

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253
             LTE   G+D A + +   +  D  Y L G K F+++ P +D  ++ A  +       +
Sbjct: 123 FALTEPMSGSDAAEMRTVAARRGDE-YVLDGSKNFITNGPQADVLLVFAMTDKAKKHKGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         G    +   K+G R++ +  + F        F LG+        +
Sbjct: 182 SAFLVP-----SDAKGFTRGKPDEKVGIRASGSCSVFFEGCAIPARFRLGEEG------D 230

Query: 311 DMKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + V+G      R +  EA  YA+ R   G ++     ++  +AD+A 
Sbjct: 231 GFKIAMATLDGGRIGVAGQALGIARAAFDEARAYAKERKAFGQVISSFQAIQFMLADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  L +R A   D     S E+A A       K +  +M+  V ++A++  GG GY
Sbjct: 291 EIDAARLLVWRAATLKDRGVRHSAESAMA-------KLYASEMSERVTSKAIQIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++E  + RH+R+S    I  G+
Sbjct: 344 VKEYDVERHWRDSRITEIYEGT 365


>gi|87122711|ref|ZP_01078586.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86162008|gb|EAQ63298.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 587

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 56/344 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   G+D+AAI ++     D  + +SG K F++     M+D  I L         A
Sbjct: 161 MNLTEPNAGSDLAAIAAKATPNGDH-FLVSGQKIFITWGDHQMTDNVIHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  FLVP+ L  +DGS    N +    ++ K+G  ++ T  + F       G+L+
Sbjct: 220 GVKG-ISLFLVPKYLVKDDGSLGERNDVTVVSVEKKLGIHASPTCVMSFGENQGAIGYLV 278

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG-------- 346
           G  +        M +   +++A   V    +++AE     A+ YA+ R V G        
Sbjct: 279 GQEHQGI-----MAMFTMMNNARQGVGLQGLAIAERAYQQALDYAKDR-VQGMSADRSKR 332

Query: 347 GILIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I+ P + R +  +   I A      + A+   LAN+    + RS +     +  PI 
Sbjct: 333 APIIEHPDVLRMLMTMKSQIDAMRSLVLSAAVEIDLANATQGPEQRSHKE-RVNMYTPIV 391

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---L 457
           K W  + A  + + A++  GG G+IEE  +A+H R++    I  G+     LD++     
Sbjct: 392 KGWITEQAQEITSLAIQVHGGVGFIEETGVAQHARDARILPIYEGTNGIQALDLIGRKMY 451

Query: 458 LEKG---TNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKE 496
            +KG   +N  E L + ++  + LG  G  ++      ++L K+
Sbjct: 452 SDKGLGFSNWVEDLTAEVQVAKSLGIKGTDLVLNALSDLTLSKQ 495


>gi|229164290|ref|ZP_04292222.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228619173|gb|EEK76067.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 379

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM + +     GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGTKIGAYGLTETGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVIFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A DI AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDIEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|254516972|ref|ZP_05129030.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219674477|gb|EED30845.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 365

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 21/257 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE  GG+D+A++ +   +  D  Y ++G K +++  M   ++  A   G  G   
Sbjct: 108 ISLGITEPGGGSDVASLRTTAVRDGD-HYIVNGSKTYITGGMRANWVSTAVRTGGDGAGG 166

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           V  LL      G     L  K G  ++ T  L F N       L+G+ N        + I
Sbjct: 167 VSMLLIPTDAEGFSRTSLDRKQGWWASDTATLYFDNVRVPVENLIGEENRGF-----LVI 221

Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +S  M ++       RV L +A ++AR R+  G  L D  V++   A +   + A 
Sbjct: 222 MTNFNSERMFMAASMEALGRVCLEDAANWARERNTFGKRLADHQVIRHKFAMMKQKLNAT 281

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A       S +   +   + A  ++ A  T  +C +       EAM+ +GGSGY+    
Sbjct: 282 QAYIRVCYESMENGNANPGDIALLKVQASETMEFCAR-------EAMQILGGSGYMRGNR 334

Query: 430 IARHYRESPANSILLGS 446
           + R YRE   N+I  GS
Sbjct: 335 VERIYREVRVNAIGGGS 351


>gi|120599237|ref|YP_963811.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559330|gb|ABM25257.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
          Length = 596

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++       +  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|313159324|gb|EFR58688.1| acyl-CoA dehydrogenase, C-terminal domain protein [Alistipes sp.
           HGB5]
          Length = 575

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 134/303 (44%), Gaps = 29/303 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ 248
           P         + LTE   G+D+ A+  +     +   + L+G K F+++   D  ++LA+
Sbjct: 163 PWVSAGATCAMDLTEPDAGSDLGAVMLKATWSEEKQTWLLNGVKRFITNGDGDVSLVLAR 222

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            E G      +  L+ D    G+  +R++NK+G + + T EL F+N    L+GD  +  G
Sbjct: 223 TEEGTTDARGLSMLVYDKRDGGVKVRRIENKMGIKGSPTCELVFTNAPAQLVGDRKM--G 280

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   ++  +++A + +    V L EA     + YA  R   G  +I    +   ++++
Sbjct: 281 LIK--YVMSLMNAARLGIGAQSVGLCEAAYREALKYAHEREQFGKPIIRFAAVSEMLSNM 338

Query: 363 ALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCC 405
              +    AL +      +              E + R E   Y R+     P+ K +  
Sbjct: 339 KAKLQGVRALLYETTRFVEVYKQYGHIAHERSLEGEERQEMKFYNRLADGFTPLVKLFSS 398

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + A     +A++  GGSG++++    R YR++   +I  G+    V+  +N + KGT   
Sbjct: 399 EYANQQAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINSVTKGT-FM 457

Query: 466 EQL 468
           EQ+
Sbjct: 458 EQI 460


>gi|115360517|ref|YP_777654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115285845|gb|ABI91320.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 596

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S  +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSHAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA   R       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            +   + + GK
Sbjct: 468 EIGDTVAALGK 478


>gi|168184488|ref|ZP_02619152.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Bf]
 gi|237796281|ref|YP_002863833.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Ba4 str. 657]
 gi|182672441|gb|EDT84402.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Bf]
 gi|229260783|gb|ACQ51816.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Ba4 str. 657]
          Length = 635

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + + S  G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365


>gi|148545651|ref|YP_001265753.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148509709|gb|ABQ76569.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 592

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405
            ++R +  +   I    A S  +A   D AK         RSEE     ++ P+ K +  
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +         +  GG GYI E    +  R+     I  G+     LD++ 
Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454


>gi|167524819|ref|XP_001746745.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775015|gb|EDQ88641.1| predicted protein [Monosiga brevicollis MX1]
          Length = 630

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 43/302 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++  K +DG Y ++G K F+S    D       I+LA+ E      
Sbjct: 188 LTEPQCGTDLGQMKTKAVKQADGSYKITGTKIFISCGEHDFTENIVHIVLARTENAPPGT 247

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  EDGS      L    L+ K+G   ++T  + F ++ G+L+G+ N  
Sbjct: 248 KGISLFIVPKYLQKEDGSLETKKNLVCGGLEKKMGIHGSSTCVMNFEDSKGWLIGEENKG 307

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        + +A+  +    ++   A+ Y + R              +G  +I   
Sbjct: 308 LFQMFTFMNTARIGTALQGLGAAELAYQGALPYTKERMSMRALSGTREPEKAGDAIIHHG 367

Query: 354 VMKR------AIADIALDIAAATAL--SFRL-ANSFDEAKSRSEEAAYARIMAPITKYWC 404
            ++R      A A+ A  +   T++   + L A + +E K   +E  +   + PI K + 
Sbjct: 368 DVRRMLLTCKAFAEGARSMMYETSMLADYMLTAKTPEEHKKVDDEMGF---LTPILKGFI 424

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
            ++     ++ ++C GG GY+++  + ++ R++   ++  G+     LD+L    LL+ G
Sbjct: 425 TEIGVEAASQGLQCFGGHGYLQDWGMEQNMRDARIGTLYEGTTGIQALDLLGRKILLQGG 484

Query: 462 TN 463
            N
Sbjct: 485 KN 486


>gi|294651674|ref|ZP_06728977.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822453|gb|EFF81353.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 607

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +++  M  +M   T      + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G +++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+       +  + +LA+   +A    ++AAY           PI K +  ++     
Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIG 456


>gi|227500885|ref|ZP_03930934.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227216989|gb|EEI82374.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 642

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K     G GLTE+  G+D     +  +   D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGD-YYILNGKKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F N     +   N+    
Sbjct: 172 TTPGIGTHGISAFIVEKGFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + + +     A+ Y + R   G  +         +AD+
Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYGKEREQFGLPIAHLQANTFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  + +  A   +  +  S EAA A       K +   +A  +  EA++  GGS
Sbjct: 289 ATNLHAARLMIYTAAELKENHERYSAEAAMA-------KQFASDLAMKITTEAIQIYGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G+I+   + R +R++    I  G+   M
Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369


>gi|226953831|ref|ZP_03824295.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835422|gb|EEH67805.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 607

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 52/344 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +++  M  +M   T      + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGQVKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G +++AT  L F N  G+L+G++N     +    
Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360
               + +A+  ++   +S   A+ YA+ R              V+  I+    V +  + 
Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352

Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
             A+       +  + +LA+   +A    ++AAY           PI K +  ++     
Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              M+  GG GYI E  + +  R++  +++  G+     LD++ 
Sbjct: 413 NHGMQVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIG 456


>gi|183981098|ref|YP_001849389.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M]
 gi|183174424|gb|ACC39534.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 56/315 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++          A M   +      LTE   G+D +A++++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRL----------ATMDAIASYC---LTEPGAGSDASALSARA 139

Query: 219 --QKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
             Q  + G  Y L G K F+S +  SD ++++A+   EG  G  +   ++E G+P GL +
Sbjct: 140 VRQGSAPGSDYVLDGVKQFISGAGASDVYVVMARTGAEGPRG--ISAFIVEKGTP-GLSF 196

Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315
             L+ K+G  +  T ++                      FG  +  LN            
Sbjct: 197 GALEEKMGWHAQPTAQVVLEGVRVPADAMLGGVDGTGAGFGIAMNGLNGGR--------- 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+ G + + A+A  Y R R   G  L+D+P ++  +AD+A  + A+  L +R
Sbjct: 248 --LNIAACSLGGAQSAFAKAGAYVRERQAFGASLLDEPTVRFTLADMATGLEASRMLLWR 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            AN+ DE  +   E      +  + K +       V  +A++  GG GY+ E  + +  R
Sbjct: 306 AANALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQLHGGYGYLREYGLEKIVR 359

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 360 DLRVHRILEGTNEIM 374


>gi|320326438|gb|EFW82491.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331590|gb|EFW87528.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 592

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|255530749|ref|YP_003091121.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255343733|gb|ACU03059.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 29/289 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F+ E       P   T+  IG  GLTE   G+D  A+      +SDG  Y ++G K W  
Sbjct: 111 FANEQQKQKWLPKLATAEWIGAWGLTEANTGSD--ALRMMTTAVSDGDEYVINGAKNWIT 168

Query: 236 SSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
                D A +M+   E      +   ++E G+P G    + +NK+G R++ T E+ F N 
Sbjct: 169 HGKTGDVAVVMVRTGEKGDSKGISAIVVERGTP-GFSAGKKENKLGMRASETTEMIFDNC 227

Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                 LLG   V  G  + MK+   LD   +S++ + + +A+     A+ YA+ RH  G
Sbjct: 228 RVPAANLLG--KVGEGFKQAMKV---LDGGRISIAALSLGIAKGAYEAAVAYAKERHQFG 282

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   +AD+A +I AA  L  + A+  +     ++E+A A       KY+  +
Sbjct: 283 QPIASFQGISFKLADMATEIEAAELLIRQAADLKNRGLQMTKESAMA-------KYFASE 335

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A     EA++  GG GY ++  + + YR+S   +I  G G + +  ++
Sbjct: 336 VAVRCATEAVQIFGGYGYTKDFPVEKFYRDSKLCTI--GEGTSEIQKIV 382


>gi|40063116|gb|AAR37963.1| acyl-CoA dehydrogenase family protein [uncultured marine bacterium
           561]
          Length = 601

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 51/341 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P++ + E+  T             + L+E + G+ +A + ++     DG Y + G+K 
Sbjct: 149 WVPRLRTGEFAGT-------------MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKI 195

Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277
           ++S     +S   +  +LA++EG       +  F+ P+ L  EDGS    N +    L +
Sbjct: 196 WISGGDHELSSNIVHAVLARIEGAPPGVKGISMFICPKFLLNEDGSVGERNDVQLAGLFH 255

Query: 278 KIGNRSNATVELEFSNTFG---FLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G R   +  L F    G   +L+G+    L      + + ++++    A ++++G + 
Sbjct: 256 KMGGRGQTSTALNFGEGEGAVAYLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQY 315

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA-------ATALSFRLANSFDEA 383
           SL  A    + R  S    +  PVM    AD+   + A       A +L    +   D+ 
Sbjct: 316 SLDYAKERPQGRKASSKDPLADPVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDW 375

Query: 384 KSRSEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           K+  +E            + PI K W  +  P     A++ +GG+GY  E  +   YR++
Sbjct: 376 KTHPDEVGRTGAFELLDFLTPIVKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDN 435

Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
             N I  G+     LD+L   + + G   ++   S +E  L
Sbjct: 436 RLNPIHEGTTGIQSLDLLGRKVPQNGLAGYQACLSAIESTL 476


>gi|187927093|ref|YP_001893438.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665422|ref|YP_002983781.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187728847|gb|ACD30011.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867449|gb|ACS65109.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 380

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 44/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +   + SDG  Y L+G K F+++   +D  I++A+     G   
Sbjct: 124 IAMTEPGAGSDLQGVRTTATRSSDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               + D S  G    +   K+G ++  T EL F N               F +L+ +L 
Sbjct: 184 TSLFVVDTSMEGFSKGKRLKKVGMKAQDTAELFFDNVRVPAANLLGEEHRGFAYLMQEL- 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E ++I I    AI S  G   +L   + Y R R   G  ++D    + A+A++ 
Sbjct: 243 ----PWERLQIAI---GAIASAEG---ALEWTLRYVRERQAFGKSILDFQTARHALAELK 292

Query: 364 LDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            ++          ++ +LA   D A             A + KYW   +   V+   ++ 
Sbjct: 293 TEVQIGRVFVDQCIALKLAGKLDAA------------TASMAKYWTTDLQFKVMDRCVQL 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR + +S    I  G+   M
Sbjct: 341 HGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 372


>gi|329895299|ref|ZP_08270941.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328922421|gb|EGG29764.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 589

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 177/396 (44%), Gaps = 60/396 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P ++S + +A+    T      +A KI S E+  T             + LTE   G+
Sbjct: 128 LAPFLSSGAALAITAHGTQEQKALYATKINSGEWSGT-------------MNLTESGAGS 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+  + ++     D  Y + G K +++    +A      ++LA++    EG  G   F+V
Sbjct: 175 DLGPLKTRAVPEGDH-YRIYGQKIYITWGDHEATDNIVHLVLARLPDAPEGSKGISLFIV 233

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G  ++ T  + + +T    G+L+G  N     + 
Sbjct: 234 PKYLVNEDGSLGARNDVYPVSVEHKLGIHASPTCVMAYGDTEGAIGYLVGRENEGLRCMF 293

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M     L   +  +     +   A  YAR R   G  +I+ P +KR +  +     A  
Sbjct: 294 TMMNEARLKVGLQGLGAAEGAFQLAKAYARERVQGGVAIIEHPDVKRMLLTMRSGCEAMR 353

Query: 371 ALSFRLANSFDEAKS--RSEEA-AYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           AL++  A + D A S   SE+A A ARI  M P+ K W       + +  ++  GG GY+
Sbjct: 354 ALAYSEAVTMDLAHSGPESEKALAQARIDLMIPVIKGWLTTFGEEITSLGVQVHGGMGYV 413

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE   A+++R+    SI  G+      D++N               L +D G++ + V T
Sbjct: 414 EETGAAQYFRDVRITSIYEGTNGIQAADLVN-------------RKLGRDGGATMELVQT 460

Query: 486 ILRDSIS-LCKED----KGLARFLTEKIALASSAAA 516
            + ++++ L   D    KG+ + L  K+ALA+   A
Sbjct: 461 EIAETVADLMASDNDVLKGMGQAL--KVALAAQVRA 494


>gi|239994396|ref|ZP_04714920.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 586

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 50/339 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD++ ++++ +   DG Y ++G+K F+++   D       ++LA+      
Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYKVTGNKIFITAGDHDWSSNVIHLVLARLPDAPK 221

Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+ L D     G  N L    +++K+G +++ T  + F    G+L+G+ 
Sbjct: 222 GVKG-ISLFLVPKFLPDASNEPGEANSLSVGSIEHKMGIKASPTCVMNFDGATGYLVGEE 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350
           N     +  M         +  +     S   A+ YAR R  S    GI         ++
Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPEGKADPIV 340

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCC 405
            QP + R +      I    ALS   A   D     E + + +     + + PI K +  
Sbjct: 341 FQPDVARMLLTQKSLIEGCRALSLFYAKFMDVEKLGEGQEKEDADKILQFLTPICKAFMT 400

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            M     +  ++  GG G+I E  + +  R+     +  G+     LD++   L   G  
Sbjct: 401 DMGLETTSLGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           + E  ++            +++ ++DS     E KGLA+
Sbjct: 461 MMEATYNAF--------NALVSDIQDS-----EAKGLAQ 486


>gi|115379922|ref|ZP_01466980.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|115363073|gb|EAU62250.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
          Length = 332

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 39/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ +   +  D  + L+G K W  S   +   ++ A+  G     L   
Sbjct: 75  LSEAHAGSDPGALRTTAVRQGD-QWVLNGSKQWITSGAYAGVMVVWARTSGTGNKGLSAF 133

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKI- 314
           ++E G+  GL   + ++K+G R + TV L F         D ++    +     E  K+ 
Sbjct: 134 IVEGGT-KGLHVGKHEDKMGLRGSNTVSLTFE--------DCHIPADQILGKEGEGFKLA 184

Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364
           ++ LD   + ++       R +L  A+ Y + RH       +QPV      +  +AD+ +
Sbjct: 185 MVALDGGRIGIASQACGVARAALEAAVRYTKDRHA-----FNQPVSEFQGPRFMMADMKV 239

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IAAA  L+FR A   ++ +  + EA+ A++ A        +MA  V  +A++  GG GY
Sbjct: 240 QIAAAELLTFRAATLKEKGQPFTREASMAKLFAS-------EMANRVCDKAVQLHGGYGY 292

Query: 425 IEERSIARHYRESPANSILLGS 446
           I+E  + R+YR++   +I  G+
Sbjct: 293 IDEFPVERYYRDARVQTIYEGT 314


>gi|152983819|ref|YP_001346002.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150958977|gb|ABR81002.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 598

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 50/345 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++    +DG + +SG K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHSISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D     G+ N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354
              +  M     L + +  +     S   A+ YAR R     +SG    D+P        
Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLSGPKAPDKPADPIIVHP 343

Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        AL++  A   D      +A  R   A     + PI K +  + 
Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
              V    M+  GG GYI E  + +  R+     I  G+     LD+L            
Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLG----------- 452

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
                 + LGS GK +    +    LC+   G  +   +   LA+
Sbjct: 453 -----RKVLGSQGKLLRGFTKLVHQLCQAQAGHPQLKGQVAQLAA 492


>gi|28211065|ref|NP_782009.1| acyl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28203504|gb|AAO35946.1| acyl-coA dehydrogenase [Clostridium tetani E88]
          Length = 635

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +  G Y L+G K F+++   +D +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGGHYILNGSKIFITNAGKADIYIIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNIGTRGISAFIVEKGWEGFSFGQHYDKLGIRSSATGELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q V+   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYSKERIQFGKPICQQQVIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A   +  +  S E+A A       K +   +   ++ +A++  GG+
Sbjct: 289 ATKLRAARLLIYSAAELKENNEPYSMESAMA-------KQYASDVCLEIVNDALQIFGGN 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|26987112|ref|NP_742537.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24981741|gb|AAN66001.1|AE016229_2 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 592

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  EDGS    N      +++K+G +++AT  + F    G+++G+ N  
Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405
            ++R +  +   I    A S  +A   D AK         RSEE     ++ P+ K +  
Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +         +  GG GYI E    +  R+     I  G+     LD++ 
Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454


>gi|84687656|ref|ZP_01015530.1| FadE25_4 [Maritimibacter alkaliphilus HTCC2654]
 gi|84664333|gb|EAQ10823.1| FadE25_4 [Rhodobacterales bacterium HTCC2654]
          Length = 385

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGR----V 253
           +GLTE + G+D++ I +  ++  D  Y ++G K F++      +I+L     EG+    +
Sbjct: 125 IGLTEPQTGSDVSGIKTTAKRDGDD-YVINGQKVFITKADQAKYILLFARTSEGKGHDGI 183

Query: 254 GCFLVPR----LLEDGSPNGLCYQRLKNKIGNRSNATVELE---------FSNTFGFLLG 300
             F+VP     +   GSP  +  + +KN      N  V  E         F N  G L  
Sbjct: 184 SSFIVPMDSPGVKIGGSPKKMGLRGIKNCDLFFENVRVPAENLVGEEGQGFKNAMGVL-- 241

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +LN  T                 SV   + +L  A+ YA+ R   G  + +  +++  +A
Sbjct: 242 NLNRPT-------------VGAASVGIAQGALDAAMAYAKEREQFGQPIGNFQLVQAMLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA AL +++A   D   +  +   Y+ ++    K +   MA  V  +A++  G
Sbjct: 289 DMAIQIEAARALLYKVAAFIDRDPTHPQVPMYSSMI----KTFASDMAMKVTTDAVQVFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G+GY+++  + R+ R++    I  G+     L +   + KG
Sbjct: 345 GAGYLQDHPVERYMRDAKVCQIYEGTNQIQRLIIARAMLKG 385


>gi|18309079|ref|NP_561013.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|168207714|ref|ZP_02633719.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|168211542|ref|ZP_02637167.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|168215038|ref|ZP_02640663.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|168218168|ref|ZP_02643793.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
 gi|182625955|ref|ZP_02953719.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|18143754|dbj|BAB79803.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|170660951|gb|EDT13634.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|170710483|gb|EDT22665.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|170713535|gb|EDT25717.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|177908762|gb|EDT71269.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|182379811|gb|EDT77290.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
          Length = 378

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + +  +K  D  Y L+G K F++ +P+S  FI+ A  +   G   +
Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGPKGL 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G+   ++++K G +S    E+ F++    ++   N+     +  KI +  
Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEGDGFKIAMKT 237

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  +
Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E K  S  AA A+++       C   A  V  EA++ +GG+GY+ E  + R
Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 351 MMRDAKITQIYEGT 364


>gi|119504010|ref|ZP_01626091.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460013|gb|EAW41107.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 601

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 51/341 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P++ + E+  T             + L+E + G+ +A + ++     DG Y + G+K 
Sbjct: 149 WVPRLRTGEFAGT-------------MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKI 195

Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277
           ++S     +S   +  +LA++EG       +  F+ P+ L  EDGS    N +    L +
Sbjct: 196 WISGGDHELSSNIVHAVLARIEGAPPGVKGISMFICPKFLLNEDGSVGARNDVQLAGLFH 255

Query: 278 KIGNRSNATVELEFSNTFG---FLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G R   +  L F    G   +L+G+    L      + + ++++    A ++++G + 
Sbjct: 256 KMGGRGQTSTALNFGEGEGAVAYLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQY 315

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA-------ATALSFRLANSFDEA 383
           SL  A    + R  S    +  PVM    AD+   + A       A +L    +   D+ 
Sbjct: 316 SLDYAKERPQGRKASSKDPLADPVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDW 375

Query: 384 KSRSEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           K+  +E            + PI K W  +  P     A++ +GG+GY  E  +   YR++
Sbjct: 376 KTHPDEVGRTGAFELLDFLTPIVKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDN 435

Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
             N I  G+     LD+L   + + G   ++   S +E  L
Sbjct: 436 RLNPIHEGTTGIQSLDLLGRKVPQNGLAGYQACLSAIESTL 476


>gi|330815914|ref|YP_004359619.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3]
 gi|327368307|gb|AEA59663.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3]
          Length = 596

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKTRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML------AQVEGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L      +  EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPSAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVKEDGSLGERNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D+A +  + A  AR       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDQAHAHPDAAERARHQAIYEYLVPVVKGWSTEMVNEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|163800396|ref|ZP_02194297.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
 gi|159175839|gb|EDP60633.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
          Length = 384

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T  V   + PK+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFATDEVKDAFCPKLITGEF----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y L+G K F+S +  +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 ATRQGDN-YILNGGKTFISGAGETDVLVVMART-GDAGAKGVSAFVVPADADGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFDNVSIAASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R+  G  L     ++  +AD+A ++ AA  L    A+  D          
Sbjct: 256 LNQAAQYMQERNQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|110798756|ref|YP_694556.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110673403|gb|ABG82390.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
          Length = 378

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + +  +K  D  Y L+G K F++ +P+S  FI+ A  +   G   +
Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGPKGL 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G+   ++++K G +S    E+ F++    ++   N+     +  KI +  
Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEDDGFKIAMKT 237

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  +
Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E K  S  AA A+++       C   A  V  EA++ +GG+GY+ E  + R
Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 351 MMRDAKITQIYEGT 364


>gi|90075722|dbj|BAE87541.1| unnamed protein product [Macaca fascicularis]
          Length = 371

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 38/264 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V+  +G   +  
Sbjct: 115 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWVSSAEYAGLFLVMANVDPTIGYKGITT 173

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-- 318
            + D    GL   + +NK+G R+++T  L F N               V + KIL  +  
Sbjct: 174 FIVDRDTPGLHIGKPENKLGLRASSTCPLTFENV-------------KVPEAKILGQVGH 220

Query: 319 --DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               AI S++  R+ +A              I Y + R   G  L D   ++  +A +A 
Sbjct: 221 GYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQGLQHQVAHMAT 280

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG GY
Sbjct: 281 QLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGY 333

Query: 425 IEERSIARHYRESPANSILLGSGN 448
            ++  + +++R++   +I  G+ N
Sbjct: 334 TKDYPVEKYFRDAKIGTIYEGASN 357


>gi|288554425|ref|YP_003426360.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545585|gb|ADC49468.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 380

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 33/288 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S EY              +G  GLTE   G+D  ++ +  +K  +  
Sbjct: 103 TEEQKQKYVPKLASGEY--------------LGAFGLTEPGAGSDAGSLKTTAKKEGND- 147

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +D +I+ A  + ++G   +   + D    G    + + K+G   +
Sbjct: 148 YILNGSKVFITNGGEADVYIVFASTDSQLGTKGISAFIVDKDTPGFSVGKKEKKMGLHGS 207

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHY 338
            T EL F +     + + N+     E  KI +  LD+  + ++   + +AE     A+ Y
Sbjct: 208 NTTELTFEDA---RVPEENLLGQEGEGFKIAMSNLDAGRIGIAAQSLGIAEAALEAAVGY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +  Q  +   +AD+A  +  +  L +R A   +  K    EA+ A++   
Sbjct: 265 AKERKQFGKPIGHQQGLGFKLADMATKVEGSKLLVYRAAKLRELGKKSGMEASMAKL--- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +  + A  V  EA++  GG GY ++  + R++R++    I  G+
Sbjct: 322 ----FASRTAVEVSIEAVQVYGGYGYTKDYPVERYFRDAKICEIYEGT 365


>gi|294146601|ref|YP_003559267.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292677018|dbj|BAI98535.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 577

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 41/343 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM        + LTE   GTD+A + ++    +DG Y ++G K F+SS   D       +
Sbjct: 151 PMVSGEWTGAMALTESGAGTDLALLKTKAAPDADGSYAITGQKIFISSGDHDFGGNIVHL 210

Query: 245 MLAQ-------VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  FLVP+ L D        N +    L+ K+G  +  T  + + 
Sbjct: 211 VLARLPDAPAGVKG-ISLFLVPKYLPDADGGFTIRNSMSVGALEKKMGIHAQPTCVMNYD 269

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR------- 342
              G+L+G+ +     +  M  ++  +  ++ + G+ +   S  +A  YA+ R       
Sbjct: 270 GATGWLVGEPHKG---LAAMFTMMNAERLMVGIQGLGIAGASYQQAAGYAKERLQGRSAD 326

Query: 343 HVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARI 395
              G + +I+   ++R + +I   + A  AL+   A   D A        R+   A   +
Sbjct: 327 GARGPVTIIEHADVRRMLLNIRAFVEAGRALAGWTALQLDRAHHHPDAAERARADALVAL 386

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K            +A +  GG GYI E  + ++ R++    I  G+     +D++
Sbjct: 387 LTPVVKAAFTDFGFESAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLV 446

Query: 456 N--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCK 495
              L   G  + E  F+ +E DL ++ G  +    R++++L +
Sbjct: 447 GRKLPMAGGAVVEGFFALVEMDLAAAEGLNIAAKTREALALLR 489


>gi|289624775|ref|ZP_06457729.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
          Length = 592

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDGATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|126459920|ref|YP_001056198.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126249641|gb|ABO08732.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 407

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 18/292 (6%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SP 238
            ++Y P    P+ +      L LTE   G+DI  +++  +K  D  Y L G K F++ +P
Sbjct: 120 KKQYIP----PVARGEKTFFLALTEPDHGSDITQLSTVAKKEGD-YYVLKGIKTFITNAP 174

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            ++  ++LAQ E   G       L      G+  + LK K+G R++   E+      G  
Sbjct: 175 TAEYGLILAQTEPEKGYRGQTLFLIHTDWPGVDVKPLKGKMGQRASPLGEIRLD---GVK 231

Query: 299 LGDLNVSTGPVEDMK----ILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349
           +    V  GP    K     L YL+   + V       M  +   A  +A++R   G  +
Sbjct: 232 VPKEYVVGGPEGLNKGFYWALQYLNIGRVHVGAVALGMMLAAFDRAYDFAQKRVQFGRPI 291

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+  ++++ +A++A  I  +    +R     DE    + E      ++ ITK +  + A 
Sbjct: 292 IEFQLIQQKLAEMAQLIDISRLAVYRAHLILDEYIKGAVEPRTMAAISSITKVFVTENAT 351

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            VI  A++ +GGSGY+EE  + R +R+     I  G+     L +++ L +G
Sbjct: 352 KVIDHAIQILGGSGYMEEYDVERIWRDHRVTRIYEGTTEINTLTIVDSLRRG 403


>gi|119385946|ref|YP_917001.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376541|gb|ABL71305.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 584

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/333 (20%), Positives = 142/333 (42%), Gaps = 51/333 (15%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A  +A   +  + + + P++ S E+                + LTE   GTD+  +TS+
Sbjct: 134 AAEALASHASDELRRTYLPRLISSEWSGV-------------MALTEASAGTDLGLLTSR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED- 264
            + + DG + ++G K F+SS   D       ++LA+       V+G +  FLVP+ L + 
Sbjct: 181 AEPVGDGSFRITGTKIFISSGDHDFGGNVIHLVLARLPDAPKGVKG-ISLFLVPKFLVNP 239

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N +    L++K+G  +  T  + +    G+L+G+       +  M  ++  + 
Sbjct: 240 DGTLGERNAMAVGSLEHKMGIHAQPTCVMNYDGAIGWLVGEEGRG---LNAMFTMMNAER 296

Query: 321 AIMSVSGMRVSL---AEAIHYARRRHVSGGI--------LIDQPVMK------RAIADIA 363
             + + G+ +S     +AI YA  R     +        +I+ P ++      R++ D +
Sbjct: 297 LFVGIQGLGISEIANQKAIAYAHDRKQGRSLDGTRSPVPIIEHPDVRKLLLTGRSLTDAS 356

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             +A  TA+   +A    +A+ R++      ++ P+ K             + + +GG G
Sbjct: 357 RGLAVWTAMQMDIAARHPDAQVRADAGDLVALLTPVIKAAFTDFGFETAVASQQVLGGHG 416

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           YI E  + +  R+     I  G+     +D++ 
Sbjct: 417 YIREWGMEQFVRDVRIAQIYEGTNGVQAMDLVT 449


>gi|124266491|ref|YP_001020495.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
 gi|124259266|gb|ABM94260.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
          Length = 596

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 183/403 (45%), Gaps = 69/403 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T   + AL+T  +    + + PK+ S ++  T             + LTE + G+
Sbjct: 124 LCPLLTDGCIEALLTAGSEAQQQTYIPKMISGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ +   DG + L G K F++    D       ++LA+V G       +  F+V
Sbjct: 171 DLALVRTRAEPQPDGSFKLFGTKIFITYGEHDMAENIVHLVLARVSGAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L   DGS    N +    +++K+G +++ T  L++ +     G+L+G  N     +E
Sbjct: 231 PKFLVKADGSLGERNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGQENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKRA 358
            M I++      + V G+ V+     +A+ YA+     R V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVAYAKDRVQSRPVDGSVRGSAPIIHHPDVRRM 347

Query: 359 IADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  +         +A   A ++  A++  +A+ R++  A+   M P+ K +  +M+  V 
Sbjct: 348 LMTMRSHTEGCRAMAIVAAAAYDAAHAHPDAEVRAQNEAFYEFMVPLVKGYSTEMSVEVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           +  ++  GG GYIEE   A++YR++   +I  G+     +   +L+ + T          
Sbjct: 408 SLGVQVHGGMGYIEETGAAQYYRDAKILTIYEGT---TAIQANDLVGRKT---------- 454

Query: 473 EQDLGSSGKKVIT-ILRDSISLCKEDKGLARFLTEKIALASSA 514
            +D G + K +   I R    L   D   AR + +++  A +A
Sbjct: 455 ARDGGGTAKAIAAQIARTEAELAARDSVAARAVLKRLTAARTA 497


>gi|326568038|gb|EGE18128.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC7]
          Length = 606

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 58/347 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ S+  ++      +   + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++    +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L     E    N +    +++K+G  S+AT  + F    GFL+G+ N     +    
Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355
               + + I  ++ + +S   ++ YA+ R     +SG    +QP              + 
Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409
           ++A A+ A  +   TA   R A+   EA ++ +E A  +      +  PI K +  ++  
Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGVFTPILKGFLTELGI 409

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  +  GG GYI+E  +    R++   ++  G+     LD+L 
Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456


>gi|146309095|ref|YP_001189560.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577296|gb|ABP86828.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 601

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V     I YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYA-----RIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D  K S++EE   A       + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQNEEEKKAADELLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                +  M+  GG G+I E  + ++ R+   + +  G+     LD+L 
Sbjct: 405 GFEAASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGTTGVQALDLLG 453


>gi|94309684|ref|YP_582894.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93353536|gb|ABF07625.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 594

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+AA+ ++ +   DG + + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLAAVRTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L   DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLLNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I ++SA  SV    ++++E     A+ +A+ R  S  +         +I  P +K
Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFAKERVQSRPVDGSAREAVTIIHHPDVK 345

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPA 410
           R +  +   I  A ++++  A + D A    +E    + MA      P+ K W  +++  
Sbjct: 346 RMLMTMRALIEGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTELSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+HYR++
Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432


>gi|209547822|ref|YP_002279739.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533578|gb|ACI53513.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 598

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 37/344 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206
           H      TSA+ ++LM  P + +     I    S E   T    M   +    + LTE  
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSTEQKATYLPKMVDGAWTGTMNLTEPH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255
            GTD+  + ++    +DG Y ++G K F+S+   D       ++LA++EG       +  
Sbjct: 170 CGTDLGMLRTKAVPQADGSYKIAGQKIFISAGEHDLADNIVHLVLARIEGAPEGTKGISL 229

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ L       G+ N +    +++K+G  +NAT  + +    GFL+G  N     + 
Sbjct: 230 FIVPKFLVGKDGALGARNAVTCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358
            M     L   +  ++   ++   A +YAR     R +SG          +I  P ++R 
Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRT 349

Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  I A + A       TAL   +A+   + K R        ++ PI K           
Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDDKERQTADDILGLVTPILKGVMTDKGFDHA 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A +  GG GYIEE  ++++ R++    I  G+     LD++ 
Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453


>gi|327482516|gb|AEA85826.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 600

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 65/336 (19%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S    P+S+  +  
Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
              N  G+L+G+ +     +  M    +I + + + ++  +G   SL    +YAR R   
Sbjct: 271 DNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSL----NYARER--P 324

Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P++           ++A  + A D+   +A   RL +  DE  + 
Sbjct: 325 QGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSA---RLVD--DEHTAE 379

Query: 387 SEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           SEEA  +      ++ PI K W  +        A++ +GG GY  E  + ++YR++  N 
Sbjct: 380 SEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNP 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           I  G+     LD+L     G  L +   + L Q LG
Sbjct: 440 IHEGTHGIQSLDLL-----GRKLMQNKGAGLRQLLG 470


>gi|311695370|gb|ADP98243.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 623

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 189 LTEPHCGSDLGTLRTKAEPNADGTYAITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 248

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  EDGS    N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 249 KGISLFIVPKCLPNEDGSAGERNAVSCGSIEHKMGIHGNATCVMNFDGAKGWLIGPENKG 308

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353
              +        + +AI  +    +    ++ YA+ R     +SG     GI   +I  P
Sbjct: 309 LNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKERLAMRSLSGPKNPEGIADPIIVHP 368

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR-----IMAPITKYWCCKM 407
            ++R +         A AL +  A   D   S ++EE   A       + PI K +  ++
Sbjct: 369 DVRRMLLTQKAVAEGARALIYLTAQQADVVHSGKTEEERKAADEALGFLTPIAKAFLTEI 428

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                   M+  GG G+I E  + ++ R++    I  G+     LD+L    L+ +G +L
Sbjct: 429 GYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 488


>gi|308049643|ref|YP_003913209.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307631833|gb|ADN76135.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 586

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 30/311 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           +TE + G+D+  I ++     DG Y +SG K F++    D       ++LA++    G  
Sbjct: 165 MTEPQAGSDLRHIRTKAVPQEDGSYRVSGTKIFITGGDHDLTENVIHLVLAKLPDAPGGS 224

Query: 255 ----CFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                FLVP+  + +DGS   PNG+    +++K+G +++AT  + F++  G+L+G +N  
Sbjct: 225 RGLSLFLVPKFEVADDGSVGGPNGVECGSVEHKMGIKASATCVINFNDAKGYLVGQVNRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVM 355
              +  M     L   I  +         A  YA  R    G           +I    +
Sbjct: 285 LAAMFTMMNYERLSIGIQGLGCAEAGYQMARDYALERKQGQGSGQGLGNGADPIIVHGDV 344

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIA 413
           +R +  IA    A  AL+     S D+ K   +  A     ++ P+ K +          
Sbjct: 345 RRMLMQIAAMTEAGRALAVLTGQSLDKQKHLKDAQADDLVGLLVPLAKAFFTDTGLESSV 404

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471
            A +  GG GY+ E  + +  R+     I  G+     LD+L   +L +   + + L + 
Sbjct: 405 AAQQVFGGHGYVRETGVEQLVRDVRIAQIYEGTNGIQALDLLGRKVLPRDAAMLKTLIAM 464

Query: 472 LEQDLGSSGKK 482
           +E DL  +G +
Sbjct: 465 VEADLAETGAE 475


>gi|158424598|ref|YP_001525890.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331487|dbj|BAF88972.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 596

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 50/297 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA+       +
Sbjct: 164 LTEPHCGTDLGLLRTKAEPQADGSYKITGSKIFISAGEHDLTENIIHLVLARLPDAPKGI 223

Query: 250 EGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+ L  EDG P   NG+    +++K+G   +AT ++ F    G+L+G    
Sbjct: 224 KG-ISLFLVPKFLPTEDGRPGPRNGVTCTGIEHKMGLNGSATCQMSFDEATGWLVGT--- 279

Query: 305 STGPVEDM-KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL--------- 349
              P + M  +   ++S  +SV    + + E     A+ YAR R V G  L         
Sbjct: 280 ---PHKGMAAMFTMMNSERLSVGTQGLGIGEASYQSAVAYARDR-VQGRALSGAKYPEKA 335

Query: 350 ----IDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPI 399
               I  P ++R++  +        ALS  +A + D      + + R +   +  +M PI
Sbjct: 336 ADPIIVHPDVRRSLMTMRAYNEGCRALSGWVARNLDLMERSNDPEERQQAEDFTALMTPI 395

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            K     +     +  ++  GG GYI +  + ++ R++    I  G+     LD++ 
Sbjct: 396 VKALFTDLGFTNASLGVQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGIQALDLVG 452


>gi|307185584|gb|EFN71538.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 353

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 22/206 (10%)

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLK-----NKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           ++GCF +     +GS  G      K     +K+G R ++T  L F +     +   NV +
Sbjct: 141 KIGCFALSEP-GNGSDAGAASTTAKASKKEDKLGIRGSSTCSLIFEDC---QVPRDNVLS 196

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            P    KI ++ LDS  + ++G  + +A+A     I YA +R   G  +I    +++ IA
Sbjct: 197 EPGMGFKIAMMTLDSGRIGIAGQALGIAQASLDCAIDYAAKRQAFGQSIIKLQTIQQKIA 256

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+AL + ++  L++R A   D  KS ++EAA A++ A  T  +C         + ++ +G
Sbjct: 257 DMALRLESSRLLTWRAAQLKDNDKSYTKEAAMAKLSASETATFCAH-------QCIQILG 309

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ +    RHYR++    I  G+
Sbjct: 310 GMGYVSDMPAERHYRDARITEIYEGT 335


>gi|229033974|ref|ZP_04188927.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|229176017|ref|ZP_04303512.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228607449|gb|EEK64776.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228728349|gb|EEL79372.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 379

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM + +     GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGTKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|227438951|gb|ACP31205.1| isovaleryl-CoA dehydrogenase [Bacillus pumilus]
          Length = 161

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 7/154 (4%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH  + ++F  NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 5   DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 63  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           A   RAAR  L AQ+EAG L   ++T A+   L+
Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLL 152


>gi|291165783|gb|EFE27831.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
          Length = 643

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +  + + D  Y L+G+K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPEAGSDAGGTQTVAELVGDH-YILNGNKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPGIGVKGISAFIIEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  +I +  LD   + ++   + +A+     A++YA+ R   G  +  Q  +   IAD+
Sbjct: 229 GQGFRIAMATLDGGRIGIASQALGIAQGAYEHALNYAKERVQFGKPIAFQQAISFKIADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + A+  + +  A   +  +S   EAA A       K +       ++ +A++  GGS
Sbjct: 289 ATKLRASRFMIYSAAELKEHHESYGMEAAMA-------KQYASDNCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|116049236|ref|YP_791961.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892742|ref|YP_002441611.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254239657|ref|ZP_04932979.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192]
 gi|296390335|ref|ZP_06879810.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584457|gb|ABJ10472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126193035|gb|EAZ57098.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192]
 gi|218772970|emb|CAW28782.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 606

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ +      + LTE + GTD+  + ++ +   DG Y +SG K F+SS  
Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202

Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++    +G  G   F+VP+ L       G  NG+    L+ K+G ++
Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R 
Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322

Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +SG    DQ               + ++AIA+      A   L+ + A+   +   
Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +++A Y R       + PI K    ++        M+  GG GYI E  + +  R++  
Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439

Query: 440 NSILLGSGNAMVLDVLN 456
            ++  G+     LD+L 
Sbjct: 440 ATLYEGTTGIQALDLLG 456


>gi|229588007|ref|YP_002870126.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229359873|emb|CAY46726.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 600

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 63/340 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247
           + LTE   G+ ++ I ++ +  +DG Y L G+K F+S    P+S+  + +         A
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352
           G     L+     + + +I + + + ++  +G   SL     YAR R    G L D    
Sbjct: 281 GKPHQGLSCMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334

Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
              PV              ++A  + A D+    A  F    + +    R        ++
Sbjct: 335 TTAPVSIIQHADIKRMLLTQKAYVEGAFDLGLYAARLFDDTTTLETDAERKHAHELLDLL 394

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L 
Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                          L Q+ G+  K++I ++ ++ +  +E
Sbjct: 455 -------------RKLAQNGGAGLKQLIRLMAETGAHAQE 481


>gi|221198533|ref|ZP_03571578.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221207762|ref|ZP_03580769.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221172259|gb|EEE04699.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221180984|gb|EEE13386.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 596

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDG+    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A    +EA  AR       + PI K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  +   L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467

Query: 471 TLEQDLGSSGK 481
            + + + + GK
Sbjct: 468 EIGETVAALGK 478


>gi|121534270|ref|ZP_01666094.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307040|gb|EAX47958.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A  + Q   + +G  Y ++G K F+++   ++ +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAA--SQQTTAVLNGDHYVINGSKMFITNAGEAEIYVIFAMTDKSKGVKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           +   +LE G P G  + + ++K+G RS+ T+EL F +     +   N+     E  KI +
Sbjct: 181 ISAFILEKGMP-GFTFGKKEHKMGIRSSQTMELIFQDV---KVPKENLLGKEGEGFKIAM 236

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + V+   + +A+A     + YA+ R   G  +     +   +AD+A  + AA 
Sbjct: 237 TTLDGGRIGVAAQALGIAQAALDYAVKYAKERVQFGKPIAANQAISFMLADMATKVDAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A    +    S+EAA A++       +   +A AV  +A++  GG GY  E  +
Sbjct: 297 LLTYRAAYLKQQGLPYSKEAAMAKM-------YASDVAMAVTTDAVQIFGGYGYSREYPV 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 350 ERLMRDAKITQIYEGT 365


>gi|186472767|ref|YP_001860109.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195099|gb|ACC73063.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 600

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 61/326 (18%)

Query: 154 PSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           PS+T  ++ AL+   +    + + P++ S E+  T             + LTE + G+D+
Sbjct: 126 PSLTDGAIEALLMAGSDAQKRRYLPRLVSGEWSGT-------------MNLTEPQAGSDL 172

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVP 259
             + ++ ++  DG Y + G K F+S     MS   + L         A V+G +  FLVP
Sbjct: 173 GLLRTRAERQHDGSYRVFGTKIFISWGEHEMSRNIVHLVLARTPDAPAGVKG-ISLFLVP 231

Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
           + L D     G  N +    +++K+G   + T  L++ +     G L+G+ N     +E 
Sbjct: 232 KYLVDEDGHAGERNDVNCVSIEHKMGLTGSPTAVLQYGDRGGAIGELIGEENRG---LEY 288

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMKR 357
           M +++   +A  +V    +++AE     A  YA+ R  S  +         +I+ P ++R
Sbjct: 289 MFVMMV--AARFAVGTQGIAIAERAYQKARSYAKERVQSRPVDGSAQQSVTIINHPDVRR 346

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAPITKYWCCKMAPAV 411
            +  +     A+ AL++  A   D A+   +  A A        M PI K W  +M+  V
Sbjct: 347 MLGTMRALTEASRALAYVAAAHSDHAQRHPDAQARAMHHGLYEFMVPIVKGWSTEMSVDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A+ YR++
Sbjct: 407 ASLGVQIHGGMGFIEETGAAQFYRDA 432


>gi|148556698|ref|YP_001264280.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148501888|gb|ABQ70142.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 596

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 46/295 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249
           LTE   GTD+  + ++     DG + ++G+K F+S+    +S+  I L           V
Sbjct: 164 LTEPHCGTDLGMLRTKAVPQPDGSHRITGNKIFISAGDHDLSENIIHLVLARLPDAPPGV 223

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L  EDGS    NG+    +++K+G +++AT ++ F ++ G+L+G+ N 
Sbjct: 224 KG-ISLFVVPKYLPKEDGSVGPSNGVSCTGIEHKMGLKASATCQMSFDDSTGWLVGEPNS 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRR------------HVSGGIL 349
               +  M  ++  +   + V G+ V+ A    A+ YA+ R             ++   +
Sbjct: 283 G---LNAMFTMMNTERVSVGVQGLGVATAAYQSAVAYAKDRIQGRALSGPKRPDLAADPI 339

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEAAYARIMAPITK 401
           I  P ++R +  +         LS  +A + D        E + R+E+     +M P+ K
Sbjct: 340 IVHPDVRRMLMTMRAYTEGCRMLSIWVARALDAERHSPDAEVRQRAED--MTALMTPVVK 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                +        ++  GG GYI E  + ++ R++    I  G+     LD++ 
Sbjct: 398 ALLTDLGHETAQIGIQVYGGHGYIREHGMEQYARDARITMIYEGTNGVQALDLVG 452


>gi|11499639|ref|NP_070881.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304]
 gi|2648474|gb|AAB89194.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304]
          Length = 409

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 32/270 (11%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA----QVEGRVGCFL 257
           TE   G+D+ AI ++ +K  D  + ++G K F+++  ++D +++LA      + R   F 
Sbjct: 151 TEPEAGSDLTAIKTKAEKDGDE-WVINGSKTFITNGTIADYYVVLAVTDPNAQPRYRGF- 208

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              L++  +P GL   ++  K+G R++ T E+ F +       ++G LN         ++
Sbjct: 209 TTFLVKKDTP-GLKTTKIGGKLGIRASPTAEVVFKDVRVDDSAVIGQLNRGF-----YQV 262

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L + D + + ++   + +A+      ++Y ++R   G  +     ++  IAD+   + AA
Sbjct: 263 LEFFDESRIEIAAQALGIAQGAFDRLVNYVKQRKQFGQPIAAFQALQHRIADLKTQLEAA 322

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A ++D+ +           +  + KY+  K+A  +  EA++  GG GYI E  
Sbjct: 323 RLLIYKAAWNYDQGRIDPG-------LTSMAKYYAGKLAVKICDEAVQMHGGYGYIAEYE 375

Query: 430 IARHYRESPANSILLGSG----NAMVLDVL 455
           + R +R++    I  G+     N +  D+L
Sbjct: 376 VERFFRDAKITEIYEGTKEVQLNTIARDIL 405


>gi|257455069|ref|ZP_05620312.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257447541|gb|EEV22541.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 597

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 49/330 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+    ++ +   DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 164 LTEAHAGSDLGITRTKAEPNEDGSYAITGQKIFISAGEHDMADNIVHIVLARLPGAPAGT 223

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + EDGS    N +    +++K+G +++AT  L F    G+L+G  N  
Sbjct: 224 KGISLFIVPKFNVNEDGSIGERNTVTCGSIEHKMGIKASATAVLNFDKAKGYLIGPENKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI----LIDQPVMKR 357
              +        + +AI  ++   ++    + YA+     R +SG      + D  ++  
Sbjct: 284 LNCMFTFMNTARIGTAIQGLTAAELAFQGGLSYAKDRLAMRALSGAKAPEQVADPIIVHP 343

Query: 358 AIADIALDIAA----ATALSFRLANSFD-EAKSRSEEAAYARIM----APITKYWCCKMA 408
           A+ ++ L   A      AL + L+   D   K   E  AYA  M     PI K +  +  
Sbjct: 344 AVRNMVLTCKAFAEGGRALVYYLSQFSDVVTKGEGESQAYADQMLSFLTPIAKAFLTETG 403

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                  ++  GG G+I E  + ++ R++    I  G+     LD+L             
Sbjct: 404 YEAANHGVQVYGGHGFIREWGMEQNVRDTRIACIYEGTTEIQSLDLLG------------ 451

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDK 498
                + LGS GK +    +     C+E+K
Sbjct: 452 ----RKVLGSQGKMLANFSKVIYQFCEENK 477


>gi|319425993|gb|ADV54067.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 596

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++       +  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI E  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQLFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|310821595|ref|YP_003953953.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309394667|gb|ADO72126.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 35/262 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A+ +   +  D  + L+G K W  S   +   ++ A+  G     L 
Sbjct: 123 FALSEAHAGSDPGALRTTAVRQGD-QWVLNGSKQWITSGAYAGVMVVWARTSGTGNKGLS 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI- 314
             ++E G+  GL   + ++K+G R + TV L F +       +LG         E  K+ 
Sbjct: 182 AFIVEGGT-KGLHVGKHEDKMGLRGSNTVSLTFEDCHIPADQILGKEG------EGFKLA 234

Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364
           ++ LD   + ++       R +L  A+ Y + RH       +QPV      +  +AD+ +
Sbjct: 235 MVALDGGRIGIASQACGVARAALEAAVRYTKDRHA-----FNQPVSEFQGPRFMMADMKV 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IAAA  L+FR A   ++ +  + EA+ A++ A        +MA  V  +A++  GG GY
Sbjct: 290 QIAAAELLTFRAATLKEKGQPFTREASMAKLFA-------SEMANRVCDKAVQLHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
           I+E  + R+YR++   +I  G+
Sbjct: 343 IDEFPVERYYRDARVQTIYEGT 364


>gi|107100735|ref|ZP_01364653.1| hypothetical protein PaerPA_01001762 [Pseudomonas aeruginosa PACS2]
          Length = 606

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ +      + LTE + GTD+  + ++ +   DG Y +SG K F+SS  
Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202

Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++    +G  G   F+VP+ L       G  NG+    L+ K+G ++
Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R 
Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322

Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +SG    DQ               + ++AIA+      A   L+ + A+   +   
Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +++A Y R       + PI K    ++        M+  GG GYI E  + +  R++  
Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439

Query: 440 NSILLGSGNAMVLDVLN 456
            ++  G+     LD+L 
Sbjct: 440 ATLYEGTTGIQALDLLG 456


>gi|307243631|ref|ZP_07525774.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM
           17678]
 gi|306493000|gb|EFM65010.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM
           17678]
          Length = 380

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA 247
           P+   ++    GLTE   G+D  A  +Q   + +G  Y L+G K W  + P  D  I+ A
Sbjct: 114 PLADGTLVGAFGLTEPGAGSDAGA--TQTTAVLEGDYYILNGRKCWITNGPFCDFAIVSA 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300
             E   G   +   + +    G  +   ++K+G R   T +L F N         G L G
Sbjct: 172 VTEKGKGTRGISTFIVETKWEGFSHGAHEDKMGIRGTRTSDLIFENMKIPKENLLGKLGG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              V    +E  +I +    A  +V   + +L EAI Y + R   G  +      +  IA
Sbjct: 232 GFKVMMNTLEAGRIGV----AAQAVGVAQSALDEAIKYTKERVQFGKTISKFQNTQFTIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L  + A   D  +S +       +++ + KY+  ++A  V  +A++  G
Sbjct: 288 DMATKVEAARLLVHQAAQLKDNKQSPA-------LLSSMAKYYAAEVANEVAYKALQLHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G++++  I R YR++   SI  G+
Sbjct: 341 GYGFVKDYRIERIYRDARILSIYEGT 366


>gi|254234405|ref|ZP_04927728.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719]
 gi|126166336|gb|EAZ51847.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719]
          Length = 606

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ +      + LTE + GTD+  + ++ +   DG Y +SG K F+SS  
Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202

Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++    +G  G   F+VP+ L       G  NG+    L+ K+G ++
Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R 
Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322

Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +SG    DQ               + ++AIA+      A   L+ + A+   +   
Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +++A Y R       + PI K    ++        M+  GG GYI E  + +  R++  
Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439

Query: 440 NSILLGSGNAMVLDVLN 456
            ++  G+     LD+L 
Sbjct: 440 ATLYEGTTGIQALDLLG 456


>gi|257469706|ref|ZP_05633798.1| acyl-coa dehydrogenase, short-chain specific [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063938|ref|ZP_07928423.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689614|gb|EFS26449.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           ulcerans ATCC 49185]
          Length = 375

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 33/281 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ K       G TE + GT + A+   G K     Y L+G K  +++ + ++ F++ A+
Sbjct: 113 PLAKGEKLGAFGWTESQAGTRVTAVLD-GDK-----YILNGKKVLITNALEAEIFVVFAK 166

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                 E  +  F+V +        G      ++K+G R ++T EL F N    ++   N
Sbjct: 167 TDMEKTENNLSGFIVEK-----GAKGFTIGEPEDKMGVRGSSTCELIFENC---IVPKEN 218

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357
           +        KI +  L+   + V+   V LA     EAI Y + R V+G  +      + 
Sbjct: 219 LLRKEGTGFKIAMCTLNGGRIGVAAQAVGLAQGALDEAIKYVKEREVNGKKVSQFQHTQF 278

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   I A   L++R A++ D       E  YA  MA + K+   K+A  V  +A++
Sbjct: 279 LLADLQTRIDAVRLLTYRAADTKDS------EGEYAH-MASMAKFLASKVALKVTEKAVQ 331

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+GY+++  + R  R++    I  G+     + + N +
Sbjct: 332 LFGGNGYLKKYPVERMLRDAKVTEIYEGTSEVQKIVIANWM 372


>gi|148380801|ref|YP_001255342.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933447|ref|YP_001385086.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153937098|ref|YP_001388555.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. Hall]
 gi|148290285|emb|CAL84406.1| acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|152929491|gb|ABS34991.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|152933012|gb|ABS38511.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. Hall]
          Length = 635

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLGKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + + S  G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365


>gi|70733998|ref|YP_257638.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68348297|gb|AAY95903.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 600

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 50/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248
           + LTE   G+ ++ I ++ +  +DG Y L G+K F+S    P+S+  +  +LA+      
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPP 221

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352
           G     L+     + + +I + + + ++  +G   SL     YAR R    G L D    
Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334

Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
              PV              ++A  + A D+    A  F    +  +A  R +      ++
Sbjct: 335 STAPVAIIQHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTTTLADAAERQQAHELLDLL 394

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L 
Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454


>gi|83745809|ref|ZP_00942866.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|83727499|gb|EAP74620.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
          Length = 915

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S E+  T             + LTE + G+
Sbjct: 445 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 491

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++     M+D  +  +LA+  G       +  F+V
Sbjct: 492 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 551

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 552 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 608

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +KR 
Sbjct: 609 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 668

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  +      A AL++  A       ++ D+A  +  EA Y   + P+ K W  +M+  V
Sbjct: 669 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 727

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            +  ++  GG G+IEE   A++YR++
Sbjct: 728 TSLGVQVHGGMGFIEETGAAQYYRDA 753


>gi|328470877|gb|EGF41788.1| branched-chain acyl-CoA dehydrogenase [Vibrio parahaemolyticus
           10329]
          Length = 384

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP  +E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADIE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
             + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|89902597|ref|YP_525068.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347334|gb|ABD71537.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 376

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D + + +   +  D  Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQLLGAFCLTEPHVGSDASGLRTTATREGDA-YVINGVKQFITSGQNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
            +   G      F+VP      +  G    RL++K+G  S+ T ++ F N         G
Sbjct: 170 TDKGAGKKGMSAFIVPT-----NAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I   S  M+ S   V+LA    YA+ R   G  + +   + 
Sbjct: 225 LEGEGYKIALGALEGGRIGIAAQSVGMARSAFEVALA----YAKERQSFGTAIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+ A  I AA  L +  A   D  +   +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLAECATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMAEQVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|332527385|ref|ZP_08403441.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332111794|gb|EGJ11774.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 595

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 142/346 (41%), Gaps = 65/346 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +   DG Y ++G K F+S+   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGMLRTKAEPQPDGTYRITGQKIFISAGEHDITPNIVHLVLARLPDAPAGS 225

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  +  DGS    NG+    +++K+G   NAT +L      G L+G+ N  
Sbjct: 226 KGISLFVVPKFQVAADGSIGERNGIYCTAVEHKMGIHGNATCQLSLEGAVGTLVGEPNRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP--- 353
                   + + +++A + V    + L E     A+ YA+ R     ++G    D+P   
Sbjct: 286 L-----QAMFVMMNAARLGVGCQALGLTETAYQMAVAYAKDRIQMRSLTGPKAPDKPADP 340

Query: 354 -----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
                      +  RA A+    +A  TAL      + D+   R+E A    ++ PI K 
Sbjct: 341 IIVHPDVRKMLLTARAYAEGGRALALYTALLLDREIASDDEDERAECADLVALLTPIVKA 400

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN------ 456
           +    A    +  M+  GGSGYI    I +  R++  N I  G+     LD+L       
Sbjct: 401 FMTDNAWIATSHCMQVFGGSGYIRGTGIEQFVRDARINMIYEGTNTVQSLDLLGRKVLGD 460

Query: 457 ---------------LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
                          + E+G N   Q F     DLG    K+ T L
Sbjct: 461 NGKKLKKFGRIVAEFIEEEGVNESMQEFVNPLADLGDKVTKLTTEL 506


>gi|257467952|ref|ZP_05632048.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|317062238|ref|ZP_07926723.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|313687914|gb|EFS24749.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
          Length = 636

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F+++   ++ +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDYYILNGGKIFITNADKAETYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI ++ LD   + ++   + +A+     A+ YA+ R   G  +  Q V+   +AD+
Sbjct: 229 GEGFKIAMFTLDGGRIGIASQALGIAQGAFENALAYAKEREQFGKPIAFQQVISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A    E K   E+ A    MA   K +   +   ++ EA++  GG+
Sbjct: 289 ATKLRAARFLVYSAA----ELKENHEDYAMESAMA---KQYASDVCLEIVNEALQIFGGT 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|331015061|gb|EGH95117.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 581

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLAALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N    
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465

Query: 467 QLFS 470
           QLFS
Sbjct: 466 QLFS 469


>gi|309783450|ref|ZP_07678155.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308917781|gb|EFP63473.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 386

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 24/254 (9%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR- 252
           + +   LTE   G+D A+I ++G  + DG  Y LSG K F++ +P + AF ++A+ EG  
Sbjct: 118 LVVSFALTEPDAGSDAASIKTKG--VKDGSDYLLSGTKRFITNAPRAGAFTLMARTEGAG 175

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-P 308
              +  F+VP  L      GL   +   K+G R   T ++   N     +   N+  G P
Sbjct: 176 AGGITAFIVPAALP-----GLSLGKPDRKMGQRGTKTCDVNLDNV---RVPAANIIGGEP 227

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K  +  LD   + +S +   +A     E++ YA++R   G  + D  +++  +AD 
Sbjct: 228 GKGFKTAMKVLDRGRLHISALACGMASRILQESVAYAQQRKQFGQRIGDFQLVQAMLADS 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  +L   +A  +D AK          + A   K +  +M   V    ++  GG+
Sbjct: 288 QAELLAGWSLVQSVAQRYD-AKPFGVSDPDVSMQASCAKMFTTEMVGRVADRGVQIHGGA 346

Query: 423 GYIEERSIARHYRE 436
           GYI E  + R YR+
Sbjct: 347 GYINEYKVERFYRD 360


>gi|330874806|gb|EGH08955.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 592

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 36/314 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAIGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++ A  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N    
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465

Query: 467 QLFS-TLEQDLGSS 479
           QLFS  + Q +G+S
Sbjct: 466 QLFSDEVRQFIGAS 479


>gi|224825725|ref|ZP_03698829.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601949|gb|EEG08128.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 594

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 47/324 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  + S+ +   DG Y ++G K 
Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEPHCGTDLGLLKSKAEPNGDGSYSITGTKI 198

Query: 234 FLSS---PMSDAFIMLA---------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           F+S+    MS   I L           V+G +  F+VP+  +DGS N +    L++K+G 
Sbjct: 199 FISAGEHDMSANIIHLVLARLPDAPKDVKG-ISLFIVPKFHDDGSRNSVYCGALEHKMGI 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++NAT  +      G+L+G+ N     +  M     L   +  +     S   A+ YA+ 
Sbjct: 258 KANATAVINLDGAKGWLIGEPNKGLSCMFTMMNAARLGCGMQGLGIGEASFQGALAYAKE 317

Query: 342 ----RHVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEA 383
               R ++G    D+P              + ++A  +    +    AL   +     ++
Sbjct: 318 RLQMRALNGVHSPDKPADPIIVHPDVRRMLLTQKAYTEAGRALTTLLALQLDIEEKHPDS 377

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +R + A    ++ P+ K +            M+  GG G+I E  + +  R+   + I 
Sbjct: 378 AARQDAADLVALLTPVAKAFMTDNGYTAANMGMQVFGGHGFIREWGMEQLVRDCRISQIY 437

Query: 444 LGSGNAMVLDVLN---LLEKGTNL 464
            G+     +D+L    LL++G  L
Sbjct: 438 EGTNGIQAIDLLGRKVLLDQGQKL 461


>gi|118462433|ref|YP_881859.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254820075|ref|ZP_05225076.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
 gi|118163720|gb|ABK64617.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 26/255 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+T +    +DG Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALTCKA-TATDGGYRVNGAKAWITHGGIADFYSLFARTGEGGQGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V     D    GL + + + K+G  +  T    + N    L+          + ++I   
Sbjct: 186 V-----DKDTEGLTFGKPEEKMGLHAIPTTTAHYDNA---LVSAQRRIGAEGQGLQIAFS 237

Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++ + V LA     EA+ YA++R   G  +ID   +   +AD+A  + +A  
Sbjct: 238 ALDSGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAFLLADMAAAVDSAR- 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D A+ R     Y+R  A + K      A  V  +A++  GG GY  +  + 
Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLIATDAAMKVTTDAVQVFGGYGYTRDYRVE 350

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I  G+
Sbjct: 351 RYMREAKITQIFEGT 365


>gi|289676303|ref|ZP_06497193.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5]
          Length = 600

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                    A V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     LN     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N+I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|241765282|ref|ZP_04763262.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241365038|gb|EER59935.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 596

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 40/284 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + ++ +   DG Y + G K F++    D       ++LA+V+G   
Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQPDGTYKIFGTKIFITYGEHDMAENIVHLVLARVQGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L  +DGS    N      +++K+G +++ T  L+F +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVNKDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI----- 348
             N     +E M I++      + + G+ +S     +A+ YA+     R V G I     
Sbjct: 281 QENRG---LEYMFIMMNAARYAVGMQGIAISERAYQKAVQYAKDRVQSRPVDGSINASAA 337

Query: 349 LIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +I  P +KR +  +   +          A +F  A+   +A +R +  A+   M P+ K 
Sbjct: 338 IIHHPDVKRMLMTMRATVEGCRAMATVAAAAFDAAHHHPDADTRKQNQAFYEFMVPLVKG 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  + +  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 398 YSTETSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|83312685|ref|YP_422949.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947526|dbj|BAE52390.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 399

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ ++ ++  D  Y L+G K F+S    SD ++++ +        + C 
Sbjct: 145 LTEPNAGSDAASLRTKAERDGDH-YVLNGTKAFISGGGRSDVYVVMVRTGAPGPKGISCL 203

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           +V    E G+P GL + + + K+G ++  T  + F       +N  G       ++   +
Sbjct: 204 VV----EAGTP-GLSFGKQEKKLGWKTQPTASVIFEDCRVPVANRIGAEGDGFKIAMKGL 258

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I       S+ G R  L  AI Y  +R   G  +      +  +AD+A ++ AA
Sbjct: 259 DGGRINI----GACSLGGARACLEHAIEYTGQRQQFGQAISAFQATQFKLADMATELEAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  R A+S D   S+S +A    +   + K     +  AV   A++  GG GYI+E  
Sbjct: 315 RLMIHRAAHSLD---SKSPQAT---VHCAMAKRMATDVGFAVTDAALQLHGGYGYIKEYP 368

Query: 430 IARHYRESPANSILLGSGNAM 450
           I R++R+   + IL GS   M
Sbjct: 369 IERYFRDLRVHQILEGSNEIM 389


>gi|239817250|ref|YP_002946160.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239803827|gb|ACS20894.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 596

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 44/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVGKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348
             N     +E M   I ++SA  +V    +++AE     A+ YA+     R V G +   
Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSMNAS 335

Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I  P +KR      A  +    +A+  A ++  A+   +A++R +  A+   M P+ 
Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDAEARKQNQAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|187933576|ref|YP_001885630.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
 gi|187721729|gb|ACD22950.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
          Length = 636

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   G+D     ++   + DG  Y L+G K F+++   +D +++ A
Sbjct: 113 PLAKGKKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+   
Sbjct: 171 VTTPDIGVKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q V+   +AD
Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L +  A   +  +S S EAA A       K +   +   V+ +A++  GG
Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDALQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365


>gi|332977280|gb|EGK14071.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 388

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 14/255 (5%)

Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++T++  +K  +  Y LSG K F+S   S   +++    G  G   V  
Sbjct: 124 LTEPNAGSDAGSLTTKAVKKDGEDYYLLSGEKTFISGAGSTDILVVMARTGNAGPKGVSA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + D    G+ Y + ++K+G ++  T  + F +       L+G  N   G    MK L  
Sbjct: 184 FVVDAHSEGISYGKNEHKMGWKAQPTRTIHFKDVKVPARNLMG--NEGEGFKFAMKGLDG 241

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++  I +V   + +L  A++Y + R   G  + +   ++  +AD+     AA  + + 
Sbjct: 242 GRINIGICAVGTAQAALETALNYVQERKQFGSAIAELQSVQFKLADMLTQTIAARQMLYL 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            AN  D  K  S+   Y      + K     ++ AV  EA++  GG GY+ E  + RH R
Sbjct: 302 AANKVD--KKHSDATTY----CAMAKRLATDLSFAVANEALQLHGGYGYLNEYPLERHVR 355

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 356 DLRVHQILEGTNEIM 370


>gi|328950895|ref|YP_004368230.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451219|gb|AEB12120.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 584

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     ++ +   DG  Y L+G K F+S +  +D F + A+V+G     FLV
Sbjct: 150 LTEPGSGSDALGAKTRAELSPDGKYYILNGTKQFISNAAFADLFTVFAKVDGEHFTAFLV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R  E     G+     + K+G ++++T +L   N       +LG++        ++  +
Sbjct: 210 ERSFE-----GVSVGPEEKKMGIKASSTRQLILENVKVPVENVLGEVGKGHKIAFNVLNV 264

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                   +V G + +L +A  YA+ RH  G  +     +++ +A IA+   AA +  +R
Sbjct: 265 GRYKLGAGAVGGAKEALGQAARYAKERHQFGQPIASFGAIRQKLARIAIKTFAAESAVYR 324

Query: 376 LANSFD---EAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                D   E K  +E        YA + A I K    ++    + EA++  GG GYI+E
Sbjct: 325 TMGLIDAALEGKKGAEAVLKGIEEYA-VEASIIKVLGSEVLDYAVDEALQIHGGYGYIQE 383

Query: 428 RSIARHYRESPANSILLGS 446
             I R YR+S  N I  G+
Sbjct: 384 YPIERAYRDSRINRIFEGT 402


>gi|172064817|ref|YP_001815529.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171997059|gb|ACB67976.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 596

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 57/371 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ +  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +  +      A AL++  A   D A   S+EA   R       + P+ K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A++YR++   +I  G+      D++    L  G  + + L +
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467

Query: 471 TLEQDLGSSGK 481
            +   + + GK
Sbjct: 468 EIGDTVAALGK 478


>gi|192289955|ref|YP_001990560.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283704|gb|ACF00085.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 374

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 21/253 (8%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLV 258
           GLTE +GG+D+ A +++  +  DG + ++G K F+++   +D +++ A+  E R G FLV
Sbjct: 120 GLTEPKGGSDLMAASTKATRTGDG-WIINGVKRFITNGGWADWYMVFARTSEKRFGLFLV 178

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED--MK 313
            +     +  G+ +   + K+G R++ T ++   N       LLGD       +    +K
Sbjct: 179 NK-----ADPGVSFGAREKKMGMRASPTSDVILDNVIVPEWRLLGDPERGAEYINKALLK 233

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             + + +  + ++G   +L EA+ Y + R   G  + +  +++  +AD+A+ + AA A +
Sbjct: 234 SRMQMSAHALGIAG--AALTEALRYTKERVQFGQPVAEFQLVRGLVADMAIKVEAARA-T 290

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A         +     A+  A I K  C   A AV  +A++  GG GY+++  + R 
Sbjct: 291 LRSACELYIGGDPA-----AKTQASIAKVLCSDAAMAVTTDAVQLHGGYGYLQDYPVERM 345

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 346 MRDAKVTQIWEGT 358


>gi|229592983|ref|YP_002875102.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364849|emb|CAY52897.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 589

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +M A+    T      +  K+ + E+  T             + LTE   GT
Sbjct: 125 MYPGLTHGAMSAIHAHGTAEQKDTYLSKLTAGEWTGT-------------MCLTEAHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------------AQVEGRVGCFL 257
           D+  I ++    +DG Y ++G K F+S+   D  + +            A  +G +  F+
Sbjct: 172 DLGLIKTRAVPQADGSYAVTGSKIFISAGEHDMSVNIIHLVLAKLPDAPAGTKG-ISLFI 230

Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           VP+   D G  N +    +++K+G + +AT  L F    GFL+G+ N     +  M    
Sbjct: 231 VPKFHADSGERNAVHCGSIEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHA 290

Query: 317 YLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGI--------LIDQPVMKRAIADIAL 364
            L + +  +     S   AI YA    + R ++G          +I  P ++R +  +  
Sbjct: 291 RLGTGMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPEKAADPIIVHPDVRRMLLTMKA 350

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
                 AL++  A   D      +A  R +       + PI K +       V    M+ 
Sbjct: 351 FNEGNRALTYFTAQLLDTAHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQV 410

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GYI E  + +  R++    I  G+     LD+L 
Sbjct: 411 FGGHGYIREWGMEQLARDARIAPIYEGTNGIQALDLLG 448


>gi|226308146|ref|YP_002768106.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187263|dbj|BAH35367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 392

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              +G + +TE   G+D+  IT++  +  D  Y +SG K
Sbjct: 122 WLPKLVSGEW--------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-YLISGAK 166

Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            F+S+  + D  I+ A+ +   G  G  L+   ++D +P G    R+  K+G +   T E
Sbjct: 167 TFISNGRNCDLVIIAAKTDPGLGARGVSLIVAEVDDNTP-GFERGRILEKVGQKGQDTTE 225

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F         LLGD    TG  + M+ L+   L   + + + M  ++A  + Y + R+
Sbjct: 226 LFFDRLRVPATNLLGDRE-GTGFAQLMQQLLPERLICGVAATAAMERAVALTVEYTKSRN 284

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402
           + G  L D       + +   ++A   +++ R++ +F D+   +          A + KY
Sbjct: 285 MFGQTLFD-------LQNTRFELAECASIA-RISRTFIDDCIVKYLAGQLDATTAAMAKY 336

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W      AVI   ++  GG GYI E  IA+ Y ++    I  GS   M
Sbjct: 337 WLTDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVM 384


>gi|323497125|ref|ZP_08102145.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM
           21326]
 gi|323317700|gb|EGA70691.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM
           21326]
          Length = 384

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 158/371 (42%), Gaps = 42/371 (11%)

Query: 120 WDRS--FEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVALMTTP 168
           WD    F   V +QA ++    LY         +++L+A  +    ++   S  A MT  
Sbjct: 31  WDEEQLFPKSVLQQAGELGFMSLYTPEDQGGLALSRLDASIIFEQLAMGCTSTTAFMT-- 88

Query: 169 RVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            +H    W    F++E    +  P   T   +G   LTE   G+D A++T+   K  D  
Sbjct: 89  -IHNMVTWMVASFAQEAVKAHFCPKLITGEWLGSYCLTEPNAGSDAASLTTSATKQGDQ- 146

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           Y ++G K F+S    ++  +++A+        V  F+VP         G+ Y R + K+G
Sbjct: 147 YIINGSKVFISGAGDTEVLVVMARTSDDGAKGVSAFVVP-----ADAEGISYGRKEPKMG 201

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335
             S  T  + F        +LLG+     G +  MK L    ++ A  SV   + +L  A
Sbjct: 202 WNSQPTRSVTFEQVSIPAEYLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQHALNAA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  L     ++  +AD+A ++ AA  L    A   D+          A  
Sbjct: 260 LQYVQERKQFGQALAHFQGLQFKLADMATELVAARQLVRLAAYKLDQGDPE------ATT 313

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL G+   M L + 
Sbjct: 314 YCAMAKRFATDVGFNVCDQALQIFGGYGYIKEYPLERHFRDVRVHQILEGTNEIMRLIIA 373

Query: 456 -NLLEKGTNLF 465
             +L +GT + 
Sbjct: 374 RRVLTEGTQIL 384


>gi|307296783|ref|ZP_07576601.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306877696|gb|EFN08922.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 380

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ S E             V   + +TE   G+D+  + +  ++  D  Y ++G K 
Sbjct: 113 WLPKMISGE-------------VITAIAMTEPGAGSDLQGVKATARRDGDE-YVINGSKT 158

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+SS   +D  I++A+ +   G   V  +L + +  G    R  +KIG R+  T EL FS
Sbjct: 159 FISSGQNADLIIVVAKTDADAGAKGVSLILVEATREGFKRGRNLDKIGQRAADTSELFFS 218

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+  L     P E + I      AI + +G + +  EA+ Y
Sbjct: 219 DVRVPASNLLGQEGKGFTYLMTQL-----PQERLSI------AISAQAGAQRAFDEAVAY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D    +  +A++A  +    A         D A SR          A 
Sbjct: 268 TKDRKAFGRTVFDFQNTRFTLAELATRLQVGWA-------HLDWALSRHLRGELTAAEAS 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             K +  ++   V  +A++  GG+GY+ E +IAR +R++    I  G+   M
Sbjct: 321 AAKLFHSELNFEVCDKALQLHGGAGYMNEYAIARLWRDARVQRIYGGTSEIM 372


>gi|291407027|ref|XP_002719859.1| PREDICTED: short-chain acyl-CoA dehydrogenase [Oryctolagus
           cuniculus]
          Length = 412

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 34/276 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGD-TWVLNGTKAWITNSWEASATVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R+++T  L F +       LLG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCHIPRDNLLGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQAVQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K  ++EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E    RHYR++    I  G+     L +   L K
Sbjct: 373 VSEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 408


>gi|290969187|ref|ZP_06560712.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780693|gb|EFD93296.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 380

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 36/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-F 256
             LTE   G+D  +++++  K  DG  Y L+G K F+++  +++ F++ A      G   
Sbjct: 122 FALTEPGTGSDAGSVSTRAVKTEDGKGYVLNGTKCFITNGALAEMFVVFANTRKTGGIRG 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED----- 311
           L   ++  G+P G    + +NK+G RS+ T EL F + F            P ED     
Sbjct: 182 LTAFIVRKGTP-GFTVGKAENKMGIRSSNTTELIFQDCFV-----------PAEDRLGRE 229

Query: 312 ---MKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362
               +I +  LD+A   V  + V +AEA       YA+ R   G  +    +++  IAD+
Sbjct: 230 GQGFRIAMNTLDAARPLVGAVSVGIAEAAFRACSEYAKVRVQFGKPIASFEMVQSMIADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A++I AA  +  +     D+    S +AA       ++K +   +A  V   A++ +GG 
Sbjct: 290 AIEIEAARMMVQKACWMKDQGLDFSRQAA-------MSKCYASDVAMRVTTNAVQVMGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GYI+E  + ++ R++    I  G+     L + N
Sbjct: 343 GYIKEYPVEKYMRDAKIMQIYEGTNQIQRLVIAN 376


>gi|47570205|ref|ZP_00240858.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|47553111|gb|EAL11509.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
          Length = 381

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+   +       +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDSVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|312197807|ref|YP_004017868.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311229143|gb|ADP81998.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--C 255
           L+E   G+D AA+  T+     + G Y LSG K W      +D + + A+  EGR G  C
Sbjct: 127 LSEPHAGSDPAALRTTATPPTTTGGDYVLSGTKAWVTHGGAADFYTVFARTGEGRGGISC 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLV     D S  GL     + K+G  ++ T ++ F +     + D  +   P + + I 
Sbjct: 187 FLV-----DASTPGLIVYPPERKMGLTASPTTQIGFEDA---PVADSRLVGVPGQGLPIA 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDS  + ++     LA+     AI YAR R   G  +ID   +   +AD+A  + ++
Sbjct: 239 LSALDSGRLGIAAAATGLAQRALDDAIAYAREREAFGRPIIDHQGLGFLLADMAAAVESS 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A     A   D  +  S+ A+ A+++A          A  V  +A++  GG+GY ++  
Sbjct: 299 RATMLTAARLRDAGRPFSKAASIAKLVA-------TDAAMKVTEDAVQVFGGAGYTKDYP 351

Query: 430 IARHYRESPANSILLGS 446
           + R+ RE+    I  G+
Sbjct: 352 VERYMREAKVMQIFEGT 368


>gi|148651933|ref|YP_001279026.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571017|gb|ABQ93076.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 606

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 143/343 (41%), Gaps = 52/343 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+  +  LM   T      + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTWSGT-------------MCLTEPQAGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++     DG Y L+G K F+SS   D       I+LA++    EG  G   F+V
Sbjct: 173 DLGQVKTKAVPQEDGSYTLNGTKIFISSGEHDLTDNIIHIVLARLPDAPEGTRGISLFIV 232

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+       E G  NG+    +++K+G  S+AT  L F N  G+L+G+ N     +    
Sbjct: 233 PKFNINEEGEAGERNGVSCGSIEHKMGIASSATCVLNFDNAKGYLIGEPNRGLKAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQPVMKRAIAD 361
               + + I  ++   ++   A+ YA+ R     +SG          +I+   ++R +  
Sbjct: 293 NTARIGTGIQGLAHCELAFQNALPYAKERRSMRTLSGTKEPEKVADAIINHADVRRMLLT 352

Query: 362 IALDIAAATALSF---RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +        ++ +   R A+   +  + +    + +         PI K +  ++A    
Sbjct: 353 MKAFAEGGRSMIYHAARYADKMSQGVAENNNEEFEKWDDKLGFYTPILKGFLTELAIEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  +  GG GYI+E  +    R++  +++  G+     LD+L
Sbjct: 413 KEGQQVYGGHGYIKEWGMELIARDARISTLYEGTTGVQALDLL 455


>gi|159184750|ref|NP_354421.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140038|gb|AAK87206.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 520

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 39/330 (11%)

Query: 151 LMSPSVTSASMVALMTTPR--VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +M+   T A+   L  T    V  +W P++ + E+  T             + ++E   G
Sbjct: 111 MMASGSTRAACHLLAETAEGAVADEWVPRLAAGEWAAT-------------ICISEPDAG 157

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-----FLV 258
           +D+A + S+     +G + + G K ++S       M     +LA+     G      FLV
Sbjct: 158 SDLARLRSRA-VFREGAWRIEGRKIWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLV 216

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P  + DG  NG+  +R++ K+G   + T  L F    G LLG+       +  M  L+ L
Sbjct: 217 PDEI-DGERNGVTVERIEEKMGLHGSPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRL 275

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATAL 372
            +    +     ++  A  YA+ R   G        +   P ++R + +  L      A 
Sbjct: 276 QTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAIAHHPDIRRQLQEARLRTETLRAA 335

Query: 373 SFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +  LA   D A+   +E       A +R + P+ K +       V  +A++ +GG+GY  
Sbjct: 336 TLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTR 395

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E  + ++ R++   +I  G+     +D+L 
Sbjct: 396 EWPLEQYLRDARVMTIYEGTTGMQAIDLLT 425


>gi|254292807|ref|YP_003058830.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041338|gb|ACT58133.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 591

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 29/285 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA------QVE 250
           + LTE   G+D+ A+ S+     DG + ++G K F++     ++D  I L         E
Sbjct: 161 MNLTEASAGSDVGALKSKAIPNDDGSFSITGQKIFITWGEHDVTDNIIQLVLARTPDSPE 220

Query: 251 GRVGC--FLVPRLL--EDGS-PNGLCYQ--RLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+    +DGS  +   YQ   L+ KIG  ++ T  +E++   G+L+G+ N
Sbjct: 221 GSRGISLFLVPKFFVNDDGSLGDRNTYQCIGLEEKIGIHASPTCVMEYNGAKGWLIGEEN 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------VSG-GILIDQPVMK 356
                +  M     L   +  V+    ++  A  YAR R       V G   +I  P +K
Sbjct: 281 KGLAAMFIMMNAARLQVGLQGVAVCESAMQAANAYARDRKQGSAPGVQGDAAIIHHPDIK 340

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410
           R +  +A    AA A+ +  A + D A+  +++A+ A+      ++ PI K W       
Sbjct: 341 RTLVSMAATTQAARAIVYAAAGASDLAEHSTDDASKAKFKQREDLLVPIAKAWATDRGCE 400

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  +A++  GG G++ E   A+   ++  N I  G+     +D++
Sbjct: 401 MANQAVQVYGGMGFMNETDAAQIMLDARINPIYEGTNGIQAMDLV 445


>gi|241662479|ref|YP_002980839.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864506|gb|ACS62167.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 594

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 149/327 (45%), Gaps = 59/327 (18%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+A + ++ + + DG + + G K F++    D       ++LA+  G       +  F+V
Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230

Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           P+ + +  P+G    R       +++K+G +++ T  L+F +     G L+G+ N     
Sbjct: 231 PKFMVN--PDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG--- 285

Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356
           +E M I++      + + G+ VS     +A+ YAR R  S  +         +I  P +K
Sbjct: 286 LEYMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVK 345

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A+ + A  +A   A +    +   +  +R + AA    + PI K W  +M+  
Sbjct: 346 RMLLTMRAMTEGARALAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSID 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +  ++  GG G+IEE   A+ YR++
Sbjct: 406 VTSMGVQVHGGMGFIEETGAAQFYRDA 432


>gi|71735218|ref|YP_276814.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555771|gb|AAZ34982.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 592

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA+        
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKFPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|229592985|ref|YP_002875104.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364851|emb|CAY52900.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 601

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 137/341 (40%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQTAYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    L++K+G   NAT  + F    GFL+G  N     +    
Sbjct: 233 PKFLPNADGSIGERNAVTCGSLEHKMGIHGNATCVMNFDAATGFLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  +S   +     + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLSHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D  K  +++ A          M PI K +  ++        
Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGTDDEAKKHADGLLAFMTPIAKAFMTEVGFESANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|146309093|ref|YP_001189558.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577294|gb|ABP86826.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 592

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 36/303 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +   DGS    N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKFMVGADGSLGEKNALGCGSIEHKMGIKASATCVMNFDGATGYLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LNAMFTMMNYERLGVGIQGLALGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++    R      ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDKDTAKRADELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
           A        +  GG G+I E    +  R+     I  G+     LD++   ++  G + +
Sbjct: 406 ALETTVHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQSLDLMGRKIVGSGGSYY 465

Query: 466 EQL 468
           + L
Sbjct: 466 KHL 468


>gi|134292556|ref|YP_001116292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135713|gb|ABO56827.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 586

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 151/360 (41%), Gaps = 41/360 (11%)

Query: 123 SFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKI 178
           + +P    Q   H +  A   ++A      LMSP +T  ++  V+     RV +D  PKI
Sbjct: 96  ALDPACGGQGLPHLLDVALQEMLAGANHAWLMSPGLTHGAVACVSAHGCARVKRDILPKI 155

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGIYCLSGHKWFLS 236
            S  +  T             + +TE + G+D+  + ++       DG Y +SG K F++
Sbjct: 156 ASGAWLTT-------------MCITEPQAGSDLGLLRTRAAPDPTGDG-YRISGSKLFIT 201

Query: 237 SPMSD-----AFIMLAQVE----GRVGC--FLVPRLLEDGSP---NGLCYQRLKNKIGNR 282
               D       ++LA++     G  G   F+VP+ L+       NG+    +++K+G +
Sbjct: 202 GGDHDLTENIVHLVLARLPDAPAGTKGLSLFVVPKWLDAAGGRVRNGIWCDGIEHKMGLK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++ T  + F    G+L+GD +     +  M     L  A+  V     +   A  YA  R
Sbjct: 262 ASPTCTMRFDAALGWLVGDAHRGLAAMFVMMNAARLQVAMQGVGHAHSAWQAASAYAGER 321

Query: 343 HVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARI 395
                  I Q P ++R + D    +    A+ + +A+  D      +A +R      A +
Sbjct: 322 VQGRAASIAQHPAIRRILLDARATVEGERAIGYWIAHWLDVAAHDPDASARDAATKLASL 381

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +      A  + A++  GG GY+ E  I +  R+   + +  G+     +D+L
Sbjct: 382 LTPVAKAFFTANGFATASNALQVFGGYGYVHEYGIEQTLRDCRVSMLYEGTNEIQAIDLL 441


>gi|322705526|gb|EFY97111.1| isovaleryl-CoA dehydrogenase IvdA, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 401

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 34/270 (12%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  +K+ DG Y L+G K W  +
Sbjct: 146 NGSPEQKKKYLPGLIAGTKIGALAMSESGSGSDVVSMRTSAKKV-DGGYLLNGSKMWITN 204

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   L +   +G    R  +K+G R + T EL F N F 
Sbjct: 205 GPDADLIVVYAKTEPDKGSKGITAFLVETKADGFSCARKLDKMGMRGSNTGELMFDNVFV 264

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350
               ++G +N   G V  +   + L+  ++S      M+ +L  A+ ++ +R   G  + 
Sbjct: 265 PEDNVVGSVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQFGSPIA 321

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAP 409
              +++  +AD+   + A+ A ++  A   DE    R+++ A A + A      C     
Sbjct: 322 HNQLVQGKLADMYTKLQASRAYTYATARQVDEQGVIRTQDCAGAILYAAERATEC----- 376

Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRE 436
                A++CI   GG GY+EE   +R  RE
Sbjct: 377 -----ALDCIQLLGGMGYVEEMPASRLLRE 401


>gi|126463158|ref|YP_001044272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104822|gb|ABN77500.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 562

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 23/291 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE + G+D+ A+ ++ + + DG Y ++G K +++   +D       ++LA++    +
Sbjct: 161 MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQ 220

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+ L D     G  N +    L+ K+G   + T  +++    G+L+G  +
Sbjct: 221 GTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPH 280

Query: 304 VSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                +  M     + +    + V+      A A    RR+   GGI I+   ++R +A 
Sbjct: 281 KGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYAMERRQGGPGGI-IEHADVRRMLAV 339

Query: 362 IALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  +  +A A++   A + D   A  + E  A A ++ PI K +   +   V +  ++  
Sbjct: 340 MKAETFSARAIALACAVALDMGRATGQPEWQARAALLTPIAKAYGTDVGIEVASMGVQVH 399

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
           GG+G+IE    A+  R+    +I  G+     +D++   +++ G   F  L
Sbjct: 400 GGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLVGRKMMDGGEAAFRLL 450


>gi|299136480|ref|ZP_07029663.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298600995|gb|EFI57150.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 387

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 42/304 (13%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W PK+ S E+  +              GLTE   G+D   + +   K+ DG + L+G
Sbjct: 112 RKRWIPKLASGEWLGS-------------WGLTEPGSGSDAGGMRTTAMKV-DGGWLLNG 157

Query: 231 HKWFLSS-PMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            K F+++   +D  ++LA  +      G +  FLV +  +   P      + +NK+G R+
Sbjct: 158 SKTFITNGTYADCALVLAVTDKEKSTHGGISAFLVEKGTKGFRPG-----KKENKLGLRA 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIH 337
           + T EL F N    L+ + N+     E  K  +  LD   +S++ + + +A      A+ 
Sbjct: 213 SDTAELIFENC---LIPEENIVGKLGEGFKDAMRVLDGGRISIAALSLGMARGALDAAMK 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA++R   G  + +   ++  +AD+A  + AA  L+ R A + D  +  + EAA A++ A
Sbjct: 270 YAQQRRQFGKAISEFQAIQFKLADMATQLDAAWLLTMRAARTKDAGQKVTMEAAMAKLYA 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A  +  E ++  GG G+I++    + YR+    +I  G+     + +   
Sbjct: 330 S-------EAACRICDEGVQIHGGYGFIKDYPAEKFYRDVKLCTIGEGTSEIQRMVIARE 382

Query: 458 LEKG 461
           L KG
Sbjct: 383 LLKG 386


>gi|302660472|ref|XP_003021915.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517]
 gi|291185835|gb|EFE41297.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517]
          Length = 633

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G + LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFFSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 225

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           +V R   D  P G L    +KNK   R++ T  ++  N       +  ++    GP    
Sbjct: 226 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 278

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D 
Sbjct: 279 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 336

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +
Sbjct: 337 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 389

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 390 EYHIGRH 396


>gi|330970884|gb|EGH70950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 592

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA+ R  S               +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++ A  R      ++ P++K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLVALLTPVSKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|66047901|ref|YP_237742.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258608|gb|AAY39704.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 592

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA+ R  S               +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++ A  R      ++ P++K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|58262444|ref|XP_568632.1| acyl-CoA oxidase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118936|ref|XP_771971.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254575|gb|EAL17324.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230806|gb|AAW47115.1| acyl-CoA oxidase, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 429

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 29/272 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+ +  +  S G  Y L+G K W  +S  ++ F++ A V+   G     
Sbjct: 170 LSEPNAGSDAFALQTTAKLDSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGIT 229

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF++ + +      G+   + + K+G R+++T  L F +     +   NV     +  KI
Sbjct: 230 CFIMSKDM------GVEIAKKEAKLGIRASSTCLLNFDDV---KIPKENVVGEIGKGYKI 280

Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            I  L+   + ++   + LA+     ++ YA +R   G  + +   M    A++A +I A
Sbjct: 281 AIEILNEGRIGIAAQMIGLAQGAFEKSLEYAYQRKQFGKPVGEFQGMSFQFAEVATEIEA 340

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   +E +  ++EAA A       KY+   +A      A+E  GG G++ E 
Sbjct: 341 ARLLTYNAARLKEEGRPFTKEAAMA-------KYYASVIAQKAAGSAIEWAGGQGFVREV 393

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +++R+S   +I  G+ N  +  +   L K
Sbjct: 394 GLEKYWRDSKIGAIYEGTNNIQLDTIAKFLRK 425


>gi|196036724|ref|ZP_03104116.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|228946184|ref|ZP_04108517.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195990688|gb|EDX54664.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|228813475|gb|EEM59763.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 381

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDIN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|94310754|ref|YP_583964.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354606|gb|ABF08695.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 429

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A+ +      G 
Sbjct: 165 FALTEPEAGSDATALQTTAVRDGDA-YILNGTKCFITNAPIAGLFTVMARTDPANLGAGG 223

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308
           +  F+VPR        GL   R   K+G   +   E+ F N        + G+     G 
Sbjct: 224 ISAFIVPR-----ETPGLSTGRPYQKMGQAGSPVSEVHFDNCRVPAVNLIGGEEG--KGF 276

Query: 309 VEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              MK+L    I+L +A+ +   +R+ L +A+ +   R   G +L D  +++  IAD   
Sbjct: 277 RTAMKVLNKQRIHL-AALCTGPAIRM-LEDAVRFVTERKQFGQVLADFQLVQAMIADCQT 334

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI AA AL    A   D  +  + +A+       I KY+  +M   V    ++  GG GY
Sbjct: 335 DIHAARALILETARKRDLGEDVTMQAS-------ICKYFASEMCGRVADRCVQLFGGYGY 387

Query: 425 IEERSIARHYRE 436
           I +  I R YR+
Sbjct: 388 IADYGIERFYRD 399


>gi|329889533|ref|ZP_08267876.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328844834|gb|EGF94398.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 594

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 70/400 (17%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++ AS+ AL      H+   + PK+ S E+          T   +   LTE   G+
Sbjct: 124 LCPMLSLASIEALEQVGNEHQKATYLPKLVSGEW----------TGAMV---LTEPHAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+ A+T+      DG Y L+G K F++    DA      ++LA++         +  FL 
Sbjct: 171 DLGALTATAVPNGDGTYALTGQKIFITWGDHDATDNIVHLVLARLPDAPAGPKGISLFLT 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G  N      +++K+G  ++ T  + +      L+G  N          
Sbjct: 231 PKFAVNADGSLGERNAFRPVGVEHKLGIHASPTCVMSYEGARAELVGQPNQGLA-----H 285

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAIA 360
           + + +++A ++V    V +AE     A+ YA  R     +        + D P ++R ++
Sbjct: 286 MFVMMNAARLAVGVEGVGIAERAYQHALAYALERRQGRSVWTGEKDAPIFDHPDVRRMLS 345

Query: 361 DIALDIAAATALSFRLANSFD---EAKSRSEEAAYA---RIMAPITKYWCCKMAPAVIAE 414
            +   +AAA A+      + D    A S  E  A+     +  PI K W   +   V + 
Sbjct: 346 VMKAKVAAARAICLSTGVAADLARHASSEEERKAWKGREDLFTPIAKAWSTDVGCEVASL 405

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
            ++  GG G+IEE   A++YR++    I  G+     +D++                L  
Sbjct: 406 GVQVHGGMGFIEETGAAQYYRDARITPIYEGTNGIQAMDLVG-------------RKLSM 452

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           D G S K +I  ++   +L + D+  A    E+ A A  A
Sbjct: 453 DGGESAKALIAEMK--ATLAQIDRLYAGKPVERFATAIEA 490


>gi|146284190|ref|YP_001174343.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572395|gb|ABP81501.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 600

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 73/355 (20%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S    P+S+  +  
Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
              N  G+L+G+ +     +  M    +I + + + ++  +G   SL    +YAR R   
Sbjct: 271 DNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSL----NYARER--P 324

Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P++           ++A  + A D+   +A   RL +  DE  + 
Sbjct: 325 QGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSA---RLVD--DEHTAE 379

Query: 387 SEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           SEEA  +      ++ PI K W  +        A++ +GG GY  E  + ++YR++  N 
Sbjct: 380 SEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNP 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           I  G+     LD+L                L Q+ G+  +++I +++D      E
Sbjct: 440 IHEGTHGIQSLDLLG-------------RKLMQNKGAGLRQLIGLIQDCCQRAAE 481


>gi|109897732|ref|YP_660987.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700013|gb|ABG39933.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 606

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++     DG Y + G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEPQCGTDLGQVKTKAIPNDDGTYDIVGTKIFISAGEHDLTENIIHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP++  D     G  N +    +++K+G ++++T  L F N  G L+G  N  
Sbjct: 225 RGISLFIVPKVQVDQQGNLGEGNKVTCGAIEDKMGIKASSTAVLNFDNAKGVLIGPENKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +A+  V    ++   ++ YA+ R              V+  I++  
Sbjct: 285 LECMFTFMNTARVGTALQGVCASELAYQNSLLYAKDRLSMRALTGKKCPDKVADPIIVHP 344

Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSE-EAAYARI--MAPITKYWCCKM 407
            V K  +   A+       + +  ++ +  + AK+ +E E A  R+  + PI K +  +M
Sbjct: 345 DVRKMLMTQKAISEGGRAMIYYTAKIVDEIEMAKTDAEREKADDRLGFITPILKAFLTEM 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                ++ M+  GG GYI+E  + +  R+   +++  G+     LD+L    LL +G +L
Sbjct: 405 GCESTSQGMQIFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLGRKILLTRGKSL 464


>gi|309389794|gb|ADO77674.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228]
          Length = 379

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +       GLTE   GTD +A  +  +   D  Y L+G K F+++   +D FI+ A 
Sbjct: 113 PLARGDKLGAFGLTEPDAGTDASAQKTTAELDGDE-YILNGSKIFITNAGEADTFIVFAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + +    G    + +NK+G  ++ T EL F         D  V   P
Sbjct: 172 TDKSKGTRGISAFIVEREYPGFSVGKKENKLGINASDTRELIFK--------DCRV---P 220

Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPV 354
            E++  K  +    A+ ++ G R+ +A            E + Y + R   G  +     
Sbjct: 221 KENLLGKEGMGFKIAMATLDGGRIGVAAQALGIAQRALDETVQYVKERQQFGRAISKFQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA++A  + AA  L ++ A + D  +  S+EAA A       KY+  + A AV  +
Sbjct: 281 LQWEIAEMATKVEAARLLVYKAAKTKDSGQRYSKEAAMA-------KYYASEAAFAVANK 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GYI+E  + R  R++    I  G+
Sbjct: 334 AIQLHGGYGYIKEYPVERLLRDAKITEIYEGT 365


>gi|288930013|ref|ZP_06423854.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288328672|gb|EFC67262.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 569

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 24/289 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      DG + ++G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLINGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G+  +  G ++ +  L
Sbjct: 231 RGLSMFIYDKRQGGVTVRHIENKLGIHGSPTCELVYKNAKAELCGETRL--GLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E ++YAR R      +ID P +   +A +   + A  ++
Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEGLNYARERRQFETNIIDFPAVYDMLARMKAKLDAGRSI 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D  K+              R+E+  Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDVYKALDDIARERKLTSEERAEQKKYMRLADAFTPLAKGMNSEYANQNAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           ++  GGSG+I E    R YR++   SI  G+    V+  +  +  GT L
Sbjct: 409 IQIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457


>gi|325954364|ref|YP_004238024.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323436982|gb|ADX67446.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 380

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 35/289 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + W PK+ + E+              IG  GLTE   G+D   +++   K  D  
Sbjct: 103 TEEQKQRWIPKLATGEW--------------IGAWGLTEHNTGSDAGGMSTTAVKDGDE- 147

Query: 226 YCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           + ++G K F++  +S   A +M    E          ++E G+P G    + +NK+G R+
Sbjct: 148 WVINGAKNFITHAISGDVAVVMTRTGEKGAKNNATAFVVEKGTP-GFTSGKKENKLGMRA 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIH 337
           + T EL F N     + D N      E  K  L  LD   +S++ + + +A+     A+ 
Sbjct: 207 SETAELIFDNV---RVSDENRLGEVGEGFKQALTILDGGRISIAALSLGIAKGAYKAALK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ RH  G  + +   +   +A++A +I A+  L ++ A   +  +  S E A A    
Sbjct: 264 YSKERHQFGQPIANFQAINFKLAEMATEIEASELLIYKAAYLKNNQQPMSTEGAMA---- 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              KY+  +    +  EA++  GG GY ++  + + YR+S   +I  G+
Sbjct: 320 ---KYFASEACVRIANEAVQIFGGYGYTKDFPVEKFYRDSKLCTIGEGT 365


>gi|330938907|ref|XP_003305779.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1]
 gi|311317037|gb|EFQ86110.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1]
          Length = 428

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           GL ++E   G+D+ ++ +  +++ DG Y L+G K W  + P +   ++ A+ E       
Sbjct: 161 GLAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKG 219

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + D + +G       +K+G R + T EL F N F     +LG++N        +++
Sbjct: 220 ITAFIVDTTTDGFSVASKLDKLGMRGSNTGELVFENVFVPSENVLGEVN------RGVRV 273

Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+    L+  ++S      M+ SL   + Y  +R   G  +    +++  +AD+     A
Sbjct: 274 LMEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRA 333

Query: 369 ATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A ++ +A + DE  +    ++++ A A +       +  + A  V A+A++ +GG GY
Sbjct: 334 SQAFTYSVARAVDELHASPDIKTQDCAGAIL-------YAAERASEVAADAVQLMGGMGY 386

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           + E  + R  R++    I  G+G + V
Sbjct: 387 MNEVPVGRILRDAKLYEI--GAGTSEV 411


>gi|50083856|ref|YP_045366.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49529832|emb|CAG67544.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 596

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 49/372 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 153 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNVDGSYHITGTKI 199

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L  EDGS    N +    +++
Sbjct: 200 FITGGDHDLSQNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNAVGPGSIEH 259

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    GFL+G  N     +  M     L   I  +     +   A  
Sbjct: 260 KMGIKASATCVMNFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 319

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  SG    ++P         ++R + ++  +  A+ A +  +    D  K 
Sbjct: 320 YATDRLQGRSASGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 379

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A  +      ++ PI K +    A     +A  C GG GYI E  + +  R+   
Sbjct: 380 STDPEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMCFGGHGYIREWGMEQCVRDLRI 439

Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
             I  G+      D++    ++ G     +  S +     + G  +  I   ++    E 
Sbjct: 440 AQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYISEIRDFTNTLGADLNFIKDATLDAATEV 499

Query: 498 KGLARFLTEKIA 509
           + + +F+ E+ A
Sbjct: 500 EAITQFIIEQAA 511


>gi|299141592|ref|ZP_07034728.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735]
 gi|298576928|gb|EFI48798.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735]
          Length = 576

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 23/307 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  E       P       + + LTE   G+D+  +  +  + +DG + L+G K F+++ 
Sbjct: 152 FGTEEQRKKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATQDADGTWRLNGVKRFITNG 211

Query: 239 MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            SD  ++LA+  EG      +   + D    G+  + ++NK+G   + T EL + N    
Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271

Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           L GDL +  G ++ +  L+    L  A  SV   + +  EA+ YA+ R   G  +I  P 
Sbjct: 272 LCGDLKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397
           +   ++ +   + A  ++ +  A   D  K+              R E   Y R+     
Sbjct: 330 VYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKEMKQYNRLADAFT 389

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K    + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  
Sbjct: 390 PIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRY 449

Query: 458 LEKGTNL 464
           +  GT L
Sbjct: 450 ITNGTYL 456


>gi|320449975|ref|YP_004202071.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150144|gb|ADW21522.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 387

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 29/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           LTE   G+D AAI +Q +++  G Y L G K W   +P +  F++ A+V EGR G   FL
Sbjct: 131 LTESHAGSDAAAIRTQAERVPGG-YRLHGRKTWISHAPEASFFVVFAKVAEGREGIAAFL 189

Query: 258 VPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           V R   +E G P          K+G +++   E+      G L+ + ++ T     + + 
Sbjct: 190 VERGTGVEVGPP--------LPKLGQKASPAAEVYLD---GVLVPEESLITRQGFALAMR 238

Query: 316 IYLDS----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           ++  S    A ++V  +R +L EA+ YA  R   G  L++   +   +A++ +D+ AA  
Sbjct: 239 VFNRSRPMVAALAVGLLRRALDEALAYAVMREAFGRPLLEHQGVGVKLAEMHMDLEAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ + A    E   R EE A     A              ++EA++  GG+GY EE  +A
Sbjct: 299 LTLKAA----ELAERGEENALEAATAKAFAADAAVRG---VSEALQVFGGNGYSEEYPLA 351

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           + YR++    I  G+     L +L  L
Sbjct: 352 KLYRDAKVLQIYEGTSEIQRLIILREL 378


>gi|134100540|ref|YP_001106201.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006453|ref|ZP_06564426.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913163|emb|CAM03276.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 383

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 37/288 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   TP   + W P++ S +              AIG   LTE   G+D  ++ ++
Sbjct: 95  AKSIATHGTPMQKQRWLPRLTSGQ--------------AIGCFALTEPESGSDAGSLATR 140

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            ++  D  + LSG K F+++   ++  ++ A+ E  V  FLVP      +  G     L 
Sbjct: 141 ARRDGDD-WLLSGQKMFITNGTWAEVALVFARAEEGVTAFLVPT-----ATPGFTANTLH 194

Query: 277 NKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            K+G R  AT EL   +         G     L ++ G +   +I      A  +V   +
Sbjct: 195 GKLGLRGQATAELVLEDVRVPDSARLGAAGKGLGIALGALTKGRI----SVAAGAVGVAQ 250

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA  R   G  +    +++  +A+ A+++ AA  L++R A   +    R EE
Sbjct: 251 AALTAAVRYAGERVQFGKPIAAHQLVQELLAESAVEVEAARLLTWRAAELAERGVPR-EE 309

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            A A  MA   KY   + A  V   A++  GG GYI+E  + ++ R++
Sbjct: 310 LATASSMA---KYHAGETAVRVANNALQVFGGYGYIDEYPVGKYLRDA 354


>gi|55981885|ref|YP_145182.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|126030329|pdb|2DVL|A Chain A, Crystal Structure Of Project Tt0160 From Thermus
           Thermophilus Hb8
 gi|126030330|pdb|2DVL|B Chain B, Crystal Structure Of Project Tt0160 From Thermus
           Thermophilus Hb8
 gi|55773298|dbj|BAD71739.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 372

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 35/258 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D  ++ ++ +++  G + L+G K W  S+  +  ++++A+ E  +  FLV  
Sbjct: 123 LTEPQAGSDAKSLRAEARRVKGG-FVLNGVKSWITSAGHAHLYVVMARTEKGISAFLV-- 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
             E G+P GL + R + K+G  +  T E+     F     LLG         E+ + L Y
Sbjct: 180 --EKGTP-GLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLG---------EEGRGLAY 227

Query: 318 ----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LDS  + V+   V +A      A  YA  R   G  L +   +   IAD+ + IAA
Sbjct: 228 ALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAA 287

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL    A   D  +  + EA+ A++            A  V  EA++ +GG GY  + 
Sbjct: 288 ARALVLEAARKKDRGERFTLEASAAKLF-------ASAAAVEVTREAVQVLGGYGYHRDY 340

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 341 RVERYYRDAKVTEIYEGT 358


>gi|50084848|ref|YP_046358.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|15812042|gb|AAL09094.1| DcaA [Acinetobacter sp. ADP1]
 gi|49530824|emb|CAG68536.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 384

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPEAGSDAASLKTTAVKDGD-FYILNGTKRFITNAPHAATFTVMARTNPAIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAVERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   DE ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDEGQNISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E SI R YR+
Sbjct: 347 EYSIERFYRD 356


>gi|189192472|ref|XP_001932575.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187974181|gb|EDU41680.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 428

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           GL ++E   G+D+ ++ +  +++ DG Y L+G K W  + P +   ++ A+ E       
Sbjct: 161 GLAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKG 219

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + D +  G       +K+G R + T EL F N F     +LG++N        +++
Sbjct: 220 ITAFIVDTATTGFSVASKLDKLGMRGSNTGELVFENVFVPRENILGEVN------RGVRV 273

Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+    L+  ++S      M+ SL   + Y  +R   G  +    +++  +AD+     A
Sbjct: 274 LMEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRA 333

Query: 369 ATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A ++ +A + DE+ +    ++++ A A +       +  + A  V A+A++ +GG GY
Sbjct: 334 SQAFTYSVARAVDESHASPDIKTQDCAGAIL-------YAAERASEVAADAVQLMGGMGY 386

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           + E  + R  R++    I  G+G + V
Sbjct: 387 MNEVPVGRILRDAKLYEI--GAGTSEV 411


>gi|317505087|ref|ZP_07963033.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606]
 gi|315663798|gb|EFV03519.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606]
          Length = 576

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 23/307 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  E       P      ++ + LTE   G+D+  +  +  + +DG + L+G K F+++ 
Sbjct: 152 FGTEEQRKKYIPRISAGESMSMDLTEPDAGSDLQRVMLKATQDADGTWRLNGVKRFITNG 211

Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            SD  ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    
Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKKDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271

Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           L GD  +  G ++ +  L+    L  A  SV   + +  EA+ YA+ R   G  +I  P 
Sbjct: 272 LCGDRKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397
           +   ++ +   + A  +L +  A   D  K+              R E   Y R+     
Sbjct: 330 VYDMLSRMKAKLDAGRSLLYMTARYVDIYKALEDISRERKLTPEERKEMKQYTRLADAFT 389

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K    + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  
Sbjct: 390 PIAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRY 449

Query: 458 LEKGTNL 464
           +  GT L
Sbjct: 450 ITNGTYL 456


>gi|260553755|ref|ZP_05826026.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405155|gb|EEW98654.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 600

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +  SDG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNSDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q  S  + +  L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521


>gi|197104024|ref|YP_002129401.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196477444|gb|ACG76972.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 582

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 57/343 (16%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T A++ AL    T R  +   PK+ S E+          T   +   LTE + G+
Sbjct: 122 LCPMLTQAAIEALTLHGTERQKRLVLPKLVSGEW----------TGAMV---LTEPQAGS 168

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------VEGRVGCFL 257
           D+AA+T++ +   +G Y L G K F++    DA      ++LA+       V+G +  FL
Sbjct: 169 DLAALTTRAEPDGEGGYRLHGQKIFITWGDHDATDNIIHLVLARTPDAPPGVKG-ISLFL 227

Query: 258 VPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             +  L+D    GS N      +++K+G  ++ T  + +      L+G+L          
Sbjct: 228 TSKYELKDDGSLGSRNDFRPGSIEHKLGIHASPTCVMLYEGAKAELVGELGQGLA----- 282

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAI 359
            + + +++A + V    V +AE     A+ +A+ R     +        + D P ++R +
Sbjct: 283 HMFVMMNAARVQVGVQGVGIAERAFQQALAFAQERRQGRAVWSADYPAAIYDHPDVRRTL 342

Query: 360 ADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +   I AA      T +   LA+  ++   R+   A   ++ PI K W   +   V +
Sbjct: 343 MLMKAKIEAARGICLTTGVLADLAHRAEDEDERAAAKARQELLTPIAKAWSTDVGVEVAS 402

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++  GG G+IEE   A+HYR++    I  G+      D++ 
Sbjct: 403 AGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAADLVG 445


>gi|115373995|ref|ZP_01461285.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|310825230|ref|YP_003957588.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115369002|gb|EAU67947.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309398302|gb|ADO75761.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 605

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 41/294 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR---- 252
           LTE   G+D+ A  ++ + +   ++ + G K F++S   DA      ++LA+ EG     
Sbjct: 168 LTEPDAGSDVGAARTRARHVGGDVWEIEGVKRFITSGEHDASENIVNMVLARPEGAGPGT 227

Query: 253 --VGCFLVPRLL--EDG---SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  F+VP+    EDG     NG+    L+ K+G + + T EL F +     G L+G++
Sbjct: 228 KGLSLFIVPKFWVEEDGRMGERNGVVCTNLEKKMGIKGSVTCELTFGDGKPARGLLVGEV 287

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------------ 350
           +     +  +     +   I S++ +  +   A+ + R R V G  L+            
Sbjct: 288 HEGIRQMFHIIEQARMGVGIKSMATLSTAYLNALAFTRER-VQGSDLLAARDKTAPRVPI 346

Query: 351 -DQPVMKRAIADIALDIAAATALSFRLANSFDE--------AKSRSEEAAYARIMAPITK 401
              P ++R +           AL    A+  D+        A   +E  A   ++ P+ K
Sbjct: 347 HRHPDVRRMLMAQKAHAEGMRALILFTASIQDQVALKGGHRATEAAELDAINDLLLPLVK 406

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +C + A  ++A +++C+GGSGY+ +  I ++ R+   +S+  G+ +   LD+L
Sbjct: 407 GYCSEKAYELLAVSLQCLGGSGYLTDYPIEQYVRDQKIDSLYEGTTHIQALDLL 460


>gi|121593019|ref|YP_984915.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120605099|gb|ABM40839.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 598

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 49/348 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL+   T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALLAHGTDEQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++ + + DG Y ++G+K F+S+   +       ++LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPVGDGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G  N +    L++K+G   NAT ++      G L+G+ +     +  M 
Sbjct: 235 PKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPHKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK---- 356
               L     S+    V+   A+ YA+ R     +SG          I++   V K    
Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGKKAPDKEADPIIVHPDVRKMLLT 354

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +A A+ A  +     L    A+S  + K R +      ++ PI K +            
Sbjct: 355 AKAYAEGARALQVFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFVTDNGHIATNAC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           M+  GG G+I+E  + +  R++  N I  G+     LD+L     G N
Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN 462


>gi|239816345|ref|YP_002945255.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802922|gb|ACS19989.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 596

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 44/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVGKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348
             N     +E M   I ++SA  +V    +++AE     A+ YA+     R V G +   
Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSMNAS 335

Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I  P +KR      A  +    +A+  A ++  A+   +A++R +  A+   M P+ 
Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDAEARKQNQAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|312892236|ref|ZP_07751733.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311295366|gb|EFQ72538.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 390

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 142/303 (46%), Gaps = 40/303 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S+ +  ++A     + H+ W PK+ + E+              IG  GLTE   G+D   
Sbjct: 103 SLCTGHILAFGNEEQKHR-WLPKLATGEW--------------IGAWGLTEANTGSDALG 147

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           + +    I DG  Y ++G K W       +  +++ +   +     +  L+ +   +G  
Sbjct: 148 MNTTA--ILDGDHYVVNGSKNWITHGKSGNVAVVMVRTGEKGDSHGISALVVEKGTDGFT 205

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           + + +NK+G R++ T EL F N       LLG  +   G  + MK+   LD   +S++ +
Sbjct: 206 HGKKENKLGMRASETTELIFDNCRVPRENLLG--SQGDGFKQAMKV---LDGGRISIAAL 260

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +A+     A+ YA+ RH  G  + +   +   +AD+A +I AA  L  + A+  +  
Sbjct: 261 SLGIAKGAFEAAVKYAKERHQFGQPICNFQGISFKLADMATEIEAAQLLIMQAADLKNRN 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           KS ++++A A       KY+  ++A     +A++  GG GY ++  + + YR++   +I 
Sbjct: 321 KSVTKQSAMA-------KYFASEVAVKAANDAVQIFGGYGYTKDFPVEKFYRDAKLCTIG 373

Query: 444 LGS 446
            G+
Sbjct: 374 EGT 376


>gi|291484441|dbj|BAI85516.1| hypothetical protein BSNT_03021 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 380

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 36/324 (11%)

Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           Y +A  E G    S  ++ A+ V+L  +P  +        + E   T+  P+   +    
Sbjct: 69  YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256
            GLTE   G+D     +Q + IS+G  Y ++G K ++++      +++  V G+   G  
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           ++  L+      GL      +K+G R + T E+   +       LLGD      P +  K
Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++I 
Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  +  + A   D     ++EAAYA++ A        +MA     +A++  GGSGY++E
Sbjct: 295 LARQMVLKAAWLKDHNHPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             + R  R+  A  + +G G + +
Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369


>gi|225864526|ref|YP_002749904.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|229184774|ref|ZP_04311967.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|225790484|gb|ACO30701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|228598678|gb|EEK56305.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 381

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|312622530|ref|YP_004024143.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202997|gb|ADQ46324.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 381

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +D +++ A  +   G    PR     ++E G     C ++ ++K+G RS++T EL 
Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRSSSTTELI 212

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F +       LLG     TG +  MK     D     V+ M V +A+     AI YA+ R
Sbjct: 213 FEDCKVPKENLLG--REGTGFIIAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKER 267

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401
              G  L     ++  +AD+ ++I AA +L +      D  AK  S+E++  ++ A    
Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSGAKDFSKESSACKVFAS--- 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 325 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|327306175|ref|XP_003237779.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326460777|gb|EGD86230.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 385

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 123 FGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 182

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           +V R   D  P G L    +KNK   R++ T  ++  N       +  ++    GP    
Sbjct: 183 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 235

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D 
Sbjct: 236 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +
Sbjct: 294 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 346

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 347 EYHIGRH 353


>gi|188588929|ref|YP_001920742.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43]
 gi|188499210|gb|ACD52346.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43]
          Length = 636

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   G+D     ++   + DG  Y L+G K F+++   +D +++ A
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+   
Sbjct: 171 VTTPDIGVRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGE 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q V+   +AD
Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L +  A   +  +S S EAA A       K +   +   V+ +A++  GG
Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDALQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365


>gi|94496861|ref|ZP_01303435.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58]
 gi|94423537|gb|EAT08564.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58]
          Length = 600

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 51/339 (15%)

Query: 155 SVTSASMVALM---TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +T+ ++ AL+   ++ + H+ + PK+ S E+  T             + LTE   GTD+
Sbjct: 129 GLTTGAISALLAKGSSEQQHR-YIPKMVSGEWTGT-------------MNLTEPHCGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPR 260
             I ++     DG Y ++G K F+S+   D       ++LA+     EG  G   F+VP+
Sbjct: 175 GLIKTKAVPQGDGSYAITGTKIFISAGEHDLADNIIHLVLAKTPDAPEGSKGISLFVVPK 234

Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           ++  +DG+    N +    +++K+G   NAT  + +    G+++G+ N     +  M   
Sbjct: 235 IMVGDDGALSDRNAVSCGSIEHKMGIHGNATCVMNYDGATGWMVGEENKGLAAMFIMMNA 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKR------ 357
             L   +  +    V+   A+HYA+ R     +            L   P ++R      
Sbjct: 295 ARLGVGLQGLGQAEVAFQNAVHYAQDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEAK 354

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A+ +    +   TA+   L++  +  + R       +++ P+ K +       V   A +
Sbjct: 355 ALTEGLRALTLWTAVQVDLSHYAETEEERQAADDLLQLLTPVVKGYGTDKGFDVAVSAQQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GYI E  + ++ R++    I  G+     +D++ 
Sbjct: 415 VFGGHGYIWENGVEQYVRDARIAQIYEGTNGIQAMDLVG 453


>gi|302186018|ref|ZP_07262691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 592

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ ++ +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAERQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ Y            A+ +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++ A  R      ++ P+ K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLVALLTPVAKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|262198232|ref|YP_003269441.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081579|gb|ACY17548.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 609

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 157/361 (43%), Gaps = 46/361 (12%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK---TSVAIGLGLTEKR 206
           H M+    S +  A    P +    A  I +   D   +A  +K    +    + LTE  
Sbjct: 112 HTMAEEFMSGANTAFTMYPGLTLGVAELIEAHGTDEQKQALCEKLYDGTFGGTMCLTEPH 171

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255
            G+D+ A T++   I DG Y +SG K +++    D       ++LA+     +G  G   
Sbjct: 172 AGSDVGANTTRATPIGDGKYKISGTKIYITGGDQDLSENIIHMVLARTADAPQGTRGLSL 231

Query: 256 FLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
           F+VPR   DGS  N +    +++K+G   +AT  L F       G L+G  +     +  
Sbjct: 232 FIVPRDRLDGSGSNDVSVAGIEHKMGINGSATCILNFGENDECIGELVG--SEEQKGIRQ 289

Query: 312 MKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI------------LIDQPVMK 356
           M  L+ L    + + G+ V+ +    A+ YA+ R     I            +I    ++
Sbjct: 290 MFHLMNLARIGVGIQGLAVASSAYLNALEYAKDRKQGTDIAQRKDPDAERVPIIRHADVR 349

Query: 357 RAIADIALDIAAATALSFRLANSFDEAK----SRSEEAA-----YARIMAPITKYWCCKM 407
           R + D+   +    ALS +L    D A+    S  E+AA        ++ P+ K +    
Sbjct: 350 RMLLDMKCRVEGIRALSVKLTMHNDRARLALESGDEKAAAYHHGQVDLLVPLLKAYATDQ 409

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLF 465
           +  + A A++  GG+GY+++  + ++ R+S   SI  G+ +   LD++   L +KG   F
Sbjct: 410 SFLICANAIQVYGGAGYLKDWPVEQYCRDSKIFSIYEGTNHIQALDLVGRKLGQKGGMNF 469

Query: 466 E 466
           +
Sbjct: 470 Q 470


>gi|320335140|ref|YP_004171851.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756429|gb|ADV68186.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 393

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++  + ++  D  Y L+G K W  S   +D ++++A+  G     V CF
Sbjct: 136 LTESTAGSDAASLQLRAERDGDH-YVLNGSKAWITSGSQADTYLVMARTGGAGARGVSCF 194

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPV 309
           +V    E+G+P GL + R + K+G  +  T  ++F        N  G     L ++   +
Sbjct: 195 IV----ENGTP-GLSFGRPEEKMGLHAAHTTTVQFEDVRVPAENLVGAEGEGLIIALSSL 249

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A+ ++   R +   A  YA  R   G  L +   +   IAD+A  I AA
Sbjct: 250 DAGRIGI----AMQALGIARAAFEHAARYALEREQFGRKLREFEGVSFKIADMAAHIEAA 305

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             ++ + A   D  +    EA+ A+++A          A  V  +A++  GG+GY  E  
Sbjct: 306 RLVALKAAWLKDAGRPYGREASIAKLLA-------SDAAVNVTRDAIQVFGGNGYSREYP 358

Query: 430 IARHYRESPANSILLGS 446
           + R YR++    I  G+
Sbjct: 359 VERLYRDAKVTEIYEGT 375


>gi|229489141|ref|ZP_04383007.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324645|gb|EEN90400.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 392

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              +G + +TE   G+D+  IT++  +  D  Y +SG K
Sbjct: 122 WLPKLVSGEW--------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-YLISGAK 166

Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            F+S+  + D  I+ A+ +   G  G  L+   ++D +P G    R+  K+G +   T E
Sbjct: 167 TFISNGRNCDLVIIAAKTDPSLGARGVSLIVAEVDDNTP-GFERGRILEKVGQKGQDTTE 225

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F         LLGD    TG  + M+ L+   L   + + + M  ++A  + Y + R+
Sbjct: 226 LFFDRLRVPATNLLGDRE-GTGFAQLMQQLLPERLICGVAATAAMDRAVALTVEYTKSRN 284

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402
           + G  L D       + +   ++A   +++ R++ +F D+   +          A + KY
Sbjct: 285 MFGQTLFD-------LQNTRFELAECASIA-RISRTFIDDCIVKYLAGQLDATTAAMAKY 336

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W      AVI   ++  GG GYI E  IA+ Y ++    I  GS   M
Sbjct: 337 WLTDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVM 384


>gi|121609169|ref|YP_996976.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553809|gb|ABM57958.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 382

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 14/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A +T+  ++ +   Y ++G K F++  M   ++ +A   G  G   + 
Sbjct: 128 LAITEPSCGSDVAQLTTTARR-AGAFYIVNGGKTFITCGMRADYLTVAVRTGGPGAGGIS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL DG   GL    LK K+G  +  T EL F +       L+G  +   G +       
Sbjct: 187 LLLVDGDTPGLARSPLK-KMGWWACDTAELFFQDCRVPAANLIGAQDQGFGVLMHNFTQE 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A  +    RV L +A+ +AR+RH  G  L    V++  + D+A  I A   L   +
Sbjct: 246 RLALAAAACGYARVCLHDALEWARQRHTFGQPLAQHQVIRHKLVDMATRIEATRTLLDDV 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+ +S   + A A+  A  T  +C         +A++ +GG G +    + R YRE
Sbjct: 306 AARLDDGQSPVAQIAMAKNFAAQTFQFCAD-------QAVQILGGMGLMRGTRVERLYRE 358

Query: 437 SPANSILLGSGNAMVLDVL 455
             A  + +G G   V+  L
Sbjct: 359 --AKIMAIGGGAQEVMKEL 375


>gi|116054234|ref|YP_788678.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313111860|ref|ZP_07797652.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|115589455|gb|ABJ15470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310884154|gb|EFQ42748.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 592

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R        ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG G+I E    +  R+     I  G+     LD++ 
Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454


>gi|89900744|ref|YP_523215.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345481|gb|ABD69684.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 596

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 40/284 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+AA+ S+ + ++DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLAAVRSRAEPLADGSYKVFGTKVFITWGEHDMAENIVHLVLARVTGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L  +DGS    N +    +++K+G +++ T  L+F +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVNKDGSLGARNDVQCVSIEHKMGIKASPTAVLQFGDHGGALGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVS---------GGI 348
             N     +E M I++      + V G+ +   S  +A+ +A+ R  S            
Sbjct: 281 QENRG---LEYMFIMMNAARFGVGVQGIAIAERSYQQAVTFAKDRVQSRPVDALAPANAT 337

Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +I  P +KR      A  +    +A   A ++  A+   +A+ R +  A+   M P+ K 
Sbjct: 338 IIYHPDVKRMLMTMRAYTEGCRAMATVAAAAYDAAHHHADAEVRKQNQAFYEFMVPLIKG 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +M+  V +  ++  GG GYIEE   A++YR++   +I  G+
Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGYIEETGAAQYYRDAKILTIYEGT 441


>gi|49185378|ref|YP_028630.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|165868334|ref|ZP_02212994.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167631825|ref|ZP_02390152.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167637642|ref|ZP_02395921.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170685119|ref|ZP_02876343.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170704739|ref|ZP_02895205.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177649576|ref|ZP_02932578.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190565459|ref|ZP_03018379.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196040402|ref|ZP_03107703.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|227814643|ref|YP_002814652.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229122085|ref|ZP_04251301.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|254685114|ref|ZP_05148974.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254722523|ref|ZP_05184311.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254737565|ref|ZP_05195268.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743251|ref|ZP_05200936.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254751880|ref|ZP_05203917.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254760400|ref|ZP_05212424.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|301054083|ref|YP_003792294.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|49179305|gb|AAT54681.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164715060|gb|EDR20577.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167514191|gb|EDR89558.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167532123|gb|EDR94759.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170130540|gb|EDS99401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170670479|gb|EDT21218.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172084650|gb|EDT69708.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190563486|gb|EDV17451.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196028887|gb|EDX67493.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|227005728|gb|ACP15471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228661428|gb|EEL17052.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|300376252|gb|ADK05156.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 381

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|297618143|ref|YP_003703302.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145980|gb|ADI02737.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 29/300 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   T      W PK  S +             + + + +TE   G+D+AA+ ++ 
Sbjct: 96  APYIASYGTEDQKARWLPKCVSGD-------------IILAIAMTEPGAGSDLAAMRTRA 142

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y L+G K F+S+  ++D  ++ A+ +   G   V   L +    G    R   
Sbjct: 143 VKDGDH-YILNGSKTFISNGILADLVVVAAKTDPAAGAKGVSLFLVERDTPGFIRSRQIP 201

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           KIG  +  T EL F +       LLG      G +  M+ L    L +AI++V+     L
Sbjct: 202 KIGLHAQDTAELFFEDCRVPASNLLG--KEGNGFIYLMQKLQQERLLAAIVNVTLAERCL 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y ++RH+ G  L      +  +A+IA +I  A      L       K   +E + 
Sbjct: 260 KLTLDYVKQRHLFGKPLSSFQNTQFVLAEIATEIQLARGFVDTLVLHHMAGKDVVQEVSM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       KYW C+M+  V    ++  GG GY  E  I+R + ++   SI  G+   M L
Sbjct: 320 A-------KYWVCEMSHRVANRCVQLFGGYGYCTEYEISRLWADTRVQSIYAGTSEVMKL 372


>gi|148554389|ref|YP_001261971.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499579|gb|ABQ67833.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 571

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 49/323 (15%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A+ ++     DG + +SG K F+
Sbjct: 149 PKLVSGEWTGT-------------MNLTEPQAGSDVGALRAKATPRGDGTWSISGTKIFI 195

Query: 236 S---SPMSDAFIMLAQV---EGRVGC-----FLVP--RLLEDGSP---NGLCYQRLKNKI 279
           S     ++D  + L  V   +G  G      FLVP  R+  DGSP   N +    +++K+
Sbjct: 196 SFGDHDLADNIVHLVLVRTPDGPAGTKGISLFLVPKYRVNPDGSPGAENDVRTVSIEHKM 255

Query: 280 GNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEA 335
           G   + T  L F +  G  +G+L     G +  M  ++    L+  +  V     +  +A
Sbjct: 256 GLHGSPTCVLSFGDR-GECVGELIGPEFGGMRAMFTMMNNARLNVGLQGVQAAEAATQKA 314

Query: 336 IHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + YAR R  S            +I+ P ++R +  +     AA AL +  A   D A + 
Sbjct: 315 VAYARERIQSARAGSGSPAPVAIIEHPDVRRMLLRMKALTQAARALLYYSAGMVDRA-TL 373

Query: 387 SEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++AA AR  ++ P+ K +   +   V    ++  GG GYIEE   A+ +R+    +I  
Sbjct: 374 GDKAAQARLELLTPLAKAYGTDLGCEVANLGIQVHGGMGYIEETGAAQFFRDVRITTIYE 433

Query: 445 GSGNAMVLDVLNL---LEKGTNL 464
           G+      D++     LE G  L
Sbjct: 434 GTNGIQAADLVGRKLGLEGGGTL 456


>gi|29347216|ref|NP_810719.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
 gi|298387470|ref|ZP_06997022.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14]
 gi|29339115|gb|AAO76913.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
 gi|298259677|gb|EFI02549.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14]
          Length = 568

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 155/343 (45%), Gaps = 36/343 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +      DG + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R+++K+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVDVRRIEHKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L     FE +
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETV 466

Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
             + E + L S  KK+  +   S +  KE  D+ L  F   ++
Sbjct: 467 PCSPEMEPLMSRLKKMADLFEASTNAVKEAQDQELLDFTARRL 509


>gi|294648825|ref|ZP_06726282.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825317|gb|EFF84063.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 375

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGHNAGLIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA HYA+ R   G  + +   + 
Sbjct: 225 KQGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATHYAKERLTFGKPIFEHQAIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M+  V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMSERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+++  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|149278901|ref|ZP_01885036.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149230520|gb|EDM35904.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 393

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 25/279 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F+ E       P   T+  IG  GLTE   G+D   +T+   +  D  Y ++G K W   
Sbjct: 114 FANESQKLRWLPKLATAEWIGAWGLTEANTGSDSLRMTTTAVQDGDE-YVINGAKNWITH 172

Query: 237 SPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
               D A +M+   E      +   ++E G+P G    + +NK+G R++ T E+ F N  
Sbjct: 173 GKTGDLAVVMVRTGEQGDSKGISAIVVERGTP-GFSAGKKENKLGMRASETTEMIFDNCR 231

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                LLG  N   G  + MK+L   D   +S++ + + +A+     A+ YA+ RH  G 
Sbjct: 232 VPKENLLG--NAGEGFKQAMKVL---DGGRISIAALSLGIAKGAYEAAVAYAKERHQFGQ 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     +   +AD+A +I AA  L  + A+  +     ++E+A A       KY+  ++
Sbjct: 287 PIASFQGISFKLADMATEIEAAELLIRQAADFKNRGIPVTKESAMA-------KYFASEV 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     EA++  GG GY ++  + ++YR+S   +I  G+
Sbjct: 340 AVRCATEAVQIFGGYGYTKDFPVEKYYRDSKLCTIGEGT 378


>gi|83643532|ref|YP_431967.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83631575|gb|ABC27542.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 386

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 39/301 (12%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+A      + + W PK+ S E             +     LTE   G+D A++ +  +K
Sbjct: 96  MIASFGHDELRQAWLPKLVSGE-------------LLASYCLTEPNAGSDAASLRTSAKK 142

Query: 221 ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             DG  Y ++G K F+S   S   +++    G  G   V  L+      G+ Y R ++K+
Sbjct: 143 --DGSDYVINGSKMFISGAGSTDVLVVMARTGEPGAKGVSALVVPADAPGVAYGRKEDKM 200

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS-----AIMSVSGMRVSLA 333
           G  S  T  + F N     +   N      E  K  ++ LD      A  S+   + +L 
Sbjct: 201 GWNSQPTRAITFDNV---RIPQTNRLGAEGEGFKFAMMGLDGGRINIATCSIGTAQAALE 257

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL----SFRLANSFDEAKSRSEE 389
            A  Y + R   G  L D   ++  +AD+A D+ AA  +    +F+L +   EA + S  
Sbjct: 258 TAQRYMQEREQFGRKLSDFQALQFKLADMATDLVAARQMVRLAAFKLDSKHPEASTYS-- 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A A+  A    +  C        +A++  GG GYI E  + R+ R+S  + IL G+   
Sbjct: 316 -AMAKRFATDAGFKICN-------DALQIHGGYGYIREYPLERYVRDSRVHQILEGTNEI 367

Query: 450 M 450
           M
Sbjct: 368 M 368


>gi|77456679|ref|YP_346184.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77380682|gb|ABA72195.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 600

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 48/312 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247
           + LTE   G+ ++ I ++ +  SDG Y L G+K F+S    P+S+  + +         A
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344
           G     L+     + + +I + + + ++  +G   SL     YAR R             
Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQGRVPDSKDPTT 336

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398
           +   +I    ++R +      +  A  L    A  FD+  +   EA   +      ++ P
Sbjct: 337 APVAIIQHADVRRMLLTQKSYVEGAFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           I K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L   
Sbjct: 397 IVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQL 468
           L + G    +QL
Sbjct: 457 LAQNGGAGLKQL 468


>gi|309779292|ref|ZP_07674054.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921850|gb|EFP67485.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 380

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 44/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +   +  DG  Y L+G K F+++   +D  I++A+     G   
Sbjct: 124 IAMTEPGAGSDLQGVRTTATRSRDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               + D S  G    +   K+G ++  T EL F N               F +L+ +L 
Sbjct: 184 TSLFVVDTSMEGFSKGKRLKKVGMKAQDTAELFFDNVRLPAGNLLGEEHRGFAYLMQEL- 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E ++I I   +AI S  G   +L   + Y R R   G  ++D    + A+A++ 
Sbjct: 243 ----PWERLQIAI---TAIASAEG---ALEWTLRYVRERQAFGKSILDFQTARHALAELK 292

Query: 364 LDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            ++          ++ +LA   D A             A + KYW   +   V+   ++ 
Sbjct: 293 TEVQIGRVFVDQCIALKLAGKLDAA------------TASMAKYWTTDLQFKVMDRCVQL 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR + +S    I  G+   M
Sbjct: 341 HGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 372


>gi|325280801|ref|YP_004253343.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324312610|gb|ADY33163.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 569

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 132/277 (47%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFL 257
           + LTE   G+D+ A+  +     +DG + L+G K F+++      ++LA+ E G      
Sbjct: 173 MDLTEPDAGSDLQAVQLKATYNEADGQWYLNGVKRFITNGDGHISLVLARSEAGTNDGRG 232

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + D + N +  +R++NK+G + + T EL F N    L+G+  +  G ++   ++  
Sbjct: 233 LSMFIYDRNSNAVTVRRIENKLGIKGSPTCELVFKNAPAELVGERKM--GLIK--YVMAL 288

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +++A + +    V +AEA     + YA+ R   G  +I+ P +   ++++   +    ++
Sbjct: 289 MNAARLGIGAQSVGIAEAAYREGLKYAQERKQFGKAIIEFPAIYEMLSNMEAKLHGIRSV 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAY---ARIMAPITKYWCCKMAPAVIAEA 415
            +  A   D  K+              R+E   Y   A I  P+ K +  + A  +  +A
Sbjct: 349 LYETARFVDMYKTYYHISKERALDKDERNEMKEYQKLADIYTPLQKLFASEYANEITYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           ++  GGSG++++  I R+ R++   +I  G+    V+
Sbjct: 409 LQIHGGSGFMKDYPIQRYVRDARITNIYEGTSQLQVV 445


>gi|187929703|ref|YP_001900190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187726593|gb|ACD27758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 381

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 48/279 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TE   G+D+ AI+++ ++  D  Y + G K F+++  +   +++A      G   V 
Sbjct: 126 IAMTEPGCGSDLKAISTRARRDGD-YYVIDGAKTFITNGFTGNLLIVAARTSGAGSKGVS 184

Query: 260 R-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303
             +LE  +  G    RL  KIG +++ T EL F +                FG L+G L 
Sbjct: 185 LFVLETENLPGFRVGRLLEKIGMQASDTAELFFDSVRVPADQLLGSVEGQGFGQLMGAL- 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E M I      A+ + + +  +L   I Y ++R + G  L D    ++ +A++A
Sbjct: 244 ----PYERMVI------AVPAAAVIDRALELTIEYTKQRKIFGAPLFDMQTTRQKLAEMA 293

Query: 364 LDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
               A    SF      RL +      +   EAAY      + K+WC +    V+ E ++
Sbjct: 294 --TIAHVVRSFVNDCTQRLLDG-----TLDNEAAY------MAKWWCTEQQCRVVDECLQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ E  IAR Y  S    I  G  N ++ D+++
Sbjct: 341 LFGGYGYMAEYPIARMYAASRVQKI-YGGANEVLKDLVS 378


>gi|304440341|ref|ZP_07400230.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371093|gb|EFM24710.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 752

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +  +   D  Y L+G+K F++ +P +D +++ A 
Sbjct: 220 PLAKGEKIGAFGLTEPEAGSDAGGTETVAELDGD-YYILNGNKIFITNAPKADYYVVFAV 278

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL+F+N     +   N+    
Sbjct: 279 TTPGIGTHGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELQFNNV---KVPKENLLGQE 335

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  +I +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 336 GQGFRIAMQTLDGGRIGIAAQALGIAQGAYEAALKYAKERIQFGRPIAQQQAISFKLADM 395

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K+  E       MA   K +   +A  V+ +A++  GG+
Sbjct: 396 ATKLRCARFLIYSAA----EMKTNHENYGMESAMA---KMYASDIALEVVNDALQIHGGN 448

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 449 GYLKGMDVERMYRDAKITTIYEGT 472


>gi|300857084|ref|YP_003782068.1| putative acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM 13528]
 gi|300437199|gb|ADK16966.1| predicted acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM
           13528]
          Length = 380

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 36/278 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF 256
           G  LTE   G+D A +  +G  + DG  Y L+  K F+++  ++  F+ + +     G  
Sbjct: 120 GFALTEPNAGSDPAGM--RGTAVKDGDEYILNATKTFITNGALASVFVGIFKTNPEAGNK 177

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
            +   + D +  G+   + ++K+G R + T ++ F N               F   L  L
Sbjct: 178 GISAFIVDANTLGITIGKHEDKMGLRLSNTTDVTFENVRVPASNMLGEEGSGFKLALNSL 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N+S   V           A ++V  M+ +L E++ YA+ R   G  +I   ++++ +AD+
Sbjct: 238 NLSRAFV-----------ATLAVGIMQRALDESVKYAKERKQFGKPIIKFQMVQQMLADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ I A+ AL        D      +E A       ITK +    A  V + A++  GG 
Sbjct: 287 AIKIEASRALVNNTMKLMDNGNLVRKEGA-------ITKAFVSDCAQEVTSNAVQIFGGY 339

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY +E  + +  R+     I  G+     + +   LEK
Sbjct: 340 GYSKEYPVEKLMRDCKVFQIFEGANQIQRMTIAGALEK 377


>gi|260428167|ref|ZP_05782146.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45]
 gi|260422659|gb|EEX15910.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45]
          Length = 592

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 43/313 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 148 YLPKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTRAEPQEDGSYRITGSKI 194

Query: 234 FLSSPMSDAF-----IMLAQVEG------RVGCFLVPRLL--EDGSP---NGLCYQRLKN 277
           ++S+   D       ++LA++ G       +  F+VP+ L  EDGSP   N L    L+ 
Sbjct: 195 WISAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFLVNEDGSPGARNSLSCGGLEK 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + +    GFL+G+ +     +  M     L   +   +   V+   A+ 
Sbjct: 255 KMGIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGFAQGAVAYENALG 314

Query: 338 YARRRH----VSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +AR R     V+G  + + P         ++R + D       A A  +  A   D A  
Sbjct: 315 FARERQQGRAVTGTQMPEAPADTIMVHPDVRRNLMDQKSITEGARAFVYWGAMLIDMAHR 374

Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             +  A   I  + P+ K +           A + +GGSG+  E  + +  R++    I 
Sbjct: 375 AEDPDAEGLISLLTPVIKGFLTDKGFETCVLAQQTLGGSGFTREWGLEQFVRDARITMIY 434

Query: 444 LGSGNAMVLDVLN 456
            G+     LD++ 
Sbjct: 435 EGTNGIQSLDLVG 447


>gi|229020562|ref|ZP_04177304.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229026780|ref|ZP_04183112.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228734503|gb|EEL85165.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228740726|gb|EEL90982.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 379

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM + +     GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGTKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F         LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEECRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|167515960|ref|XP_001742321.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778945|gb|EDQ92559.1| predicted protein [Monosiga brevicollis MX1]
          Length = 409

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 24/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++  ++  D  + L+G K W  + P SDA ++ A     +    +  
Sbjct: 151 LSEPGNGSDAGAASTTARREGD-QWILNGTKAWITNGPESDAVVVFATTNKELKHKGISA 209

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + D    GL   + ++K+G R++ T  L F +       +LG+  +        KI + 
Sbjct: 210 FIVDKKTPGLSCGKKEDKLGIRASGTCNLIFEDCAIPAANILGEEGMG------FKIAMS 263

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + +A+     A+ Y + R   G  L+    +   +AD+A  + +A  
Sbjct: 264 TLDGGRIGIAAQALGIAQAALDCAVAYGQERKSMGVPLVSHQAISMKLADMATRLESARL 323

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A   DE K   +EAA  ++ A        + A  V  +A++ +GG GY+ E    
Sbjct: 324 LTWRAAALKDEGKPFIKEAAMGKLAA-------SEAATFVSHQAIQILGGMGYVTEMPAE 376

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           RHYR++    I  G+     L +   L K
Sbjct: 377 RHYRDARITEIYEGTSEIQRLVIAGQLVK 405


>gi|118477942|ref|YP_895093.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|118417167|gb|ABK85586.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
          Length = 385

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 117 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 174

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 175 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 229

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 230 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 284 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 337 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 373


>gi|315047290|ref|XP_003173020.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311343406|gb|EFR02609.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 424

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 162 FGLTEPNHGSDPGSMETVARPHPTKTGYYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 221

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           ++ R   D  P G L    +KNK   R++ T  ++  N       +  ++    GP    
Sbjct: 222 VIER---DQCPEGTLKTPAIKNKTALRASITGMIQMDNCPVPEANMFPEVTGLVGP---- 274

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D 
Sbjct: 275 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 332

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +
Sbjct: 333 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 385

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 386 EYHIGRH 392


>gi|288800850|ref|ZP_06406307.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288332311|gb|EFC70792.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 574

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 30/328 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +G + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEEEGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + +++K+G   + T EL + N    L G  +   G ++ +  L
Sbjct: 231 RGLSMFIYDKRQGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  EA+ YA  R      ++D P +   +A I   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEALAYAEERKQFDTAIVDMPAVYDMVARIKAKLDAGRSL 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ +   D  K+              ++E+  Y R+     PI K    +       +A
Sbjct: 349 LYQTSRYVDIYKALDDIARERKLTPEEKAEQKKYTRLADAFTPIAKGMNSEYVNQNTYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469
           ++  GGSG+I E    R YR++   SI  G+    V+  +  +  GT       + +   
Sbjct: 409 IQVHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYASMIQEMLQNEV 468

Query: 470 STLEQDLGSSGKKVITILRDSISLCKED 497
           S   Q L     K++  L ++I   KED
Sbjct: 469 SAEMQPLKDRVVKMVAKLEEAIEKVKED 496


>gi|160874881|ref|YP_001554197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160860403|gb|ABX48937.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315267117|gb|ADT93970.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 596

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++   +S+G++ ++G K F+SS    ++D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  ++ A        A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +A +  GG GYI +  + +  R+S    I  G+     LD++ 
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHDWGMEQFVRDSRIALIYEGTNGIQALDLVG 452


>gi|88704323|ref|ZP_01102037.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701374|gb|EAQ98479.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 390

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 21/261 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE  GG+D+A + +   +  D  Y ++G K +++  M   ++  A   G  G   
Sbjct: 133 ISLGITEPGGGSDVARLRTTAVRDGD-HYIVNGSKTYITGGMRANWVSTAVRTGGEGAGG 191

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           V  LL      G     L  K G  ++ T  L F N       L+G+ N        + I
Sbjct: 192 VSMLLIPTDAPGFSRTALDRKQGWWASDTATLYFDNVRVPVENLIGEENRGF-----IVI 246

Query: 315 LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +S  M+++       RV L EA  +AR R+  G  L D  V++   A +   + A 
Sbjct: 247 MTNFNSERMAMAVSMEAQGRVCLEEAATWARERNTFGKRLADHQVIRHKFAQMKQKLNAT 306

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A       S +       + A  ++ A  T  +C +       EAM+ +GG+GY+    
Sbjct: 307 QAYIRSCYESIENGNPNPGDIALLKVQASETLEFCAR-------EAMQILGGTGYMRGNR 359

Query: 430 IARHYRESPANSILLGSGNAM 450
           + R YRE   N+I  GS   M
Sbjct: 360 VERIYREVRVNAIGGGSEEIM 380


>gi|327267682|ref|XP_003218628.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 433

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 28/283 (9%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           ++  E       P    ++   + ++E   G+D  ++ ++ +K  D  Y ++G K W   
Sbjct: 153 VYGTEEQKMTYLPKMSRNLVGSVCISETGSGSDAFSLKTRAEKKGD-YYIINGSKMWISL 211

Query: 237 SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +  +  F ++A      G     CF+V R  E     GL  ++ +NK+G R+ +T  + F
Sbjct: 212 AEQAGVFFVMANANLSAGYKGITCFIVDRNTE-----GLHVEKKENKLGIRATSTCPVTF 266

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
            N     + + N+     +  K  I  L++  + +S   + LA+      I Y ++R+  
Sbjct: 267 DNV---KVPESNIVGQFGKGYKYAIEMLNTGRIGISAQMLGLAQGCFDQTIPYIKQRNQF 323

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +   M+  IA +A  I AA  L++  A   +  K   +EA+ A       KY+  
Sbjct: 324 GKSIFEFQGMQHQIAHVATQIEAARLLTYNAARLAETGKPFIKEASMA-------KYYTA 376

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++A    ++ +E +GG G+ ++  I ++YR+    +I  G+ N
Sbjct: 377 EVATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTSN 419


>gi|261880075|ref|ZP_06006502.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361]
 gi|270333229|gb|EFA44015.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361]
          Length = 573

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 27/309 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  E       P       + + LTE   G+D+  +  +  +  DG + L+G K F+++ 
Sbjct: 152 FGSEEQKQKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNG 211

Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            SD  ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    
Sbjct: 212 DSDIHLVLARSEAGTKDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKAE 271

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ 352
           L GD  +  G ++   ++  ++ A + ++   V LA     +AI YA  R   G  +   
Sbjct: 272 LCGDRRL--GLIK--YVMSLMNGARLGITAQSVGLAQEAYTQAIEYANARVQFGKKIAMF 327

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI--- 395
           P +   ++ +   + A  A+ ++ +   D  K+              R E   Y+R+   
Sbjct: 328 PAVYDMLSRMKAKLDAGRAILYQTSRYVDIYKTLEDISRERKLTPEERKEMKTYSRLADA 387

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P++K    + A     + +   GGSG+I E    R YR+    SI  G+    V+  +
Sbjct: 388 LTPLSKGMVSEYANQCAYDCISVHGGSGFIMEYKCQRLYRDVRIFSIYEGTTQLQVVAAM 447

Query: 456 NLLEKGTNL 464
             +  GT L
Sbjct: 448 RYITNGTYL 456


>gi|281420471|ref|ZP_06251470.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205]
 gi|281405244|gb|EFB35924.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205]
          Length = 567

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 31/340 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCF 256
           + + LTE   G+D+  +  +  +  DG + L+G K F+++  SD  ++LA+  EG     
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNGDSDIHLVLARSEEGTKDGR 230

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + D    G+  + +++K+G   + T EL + N+   L G  N   G ++ +  L+
Sbjct: 231 GLSMFIYDKRDGGVTVRHIEHKLGIHGSPTCELVYKNSKAELCG--NTRLGLIKYVMALM 288

Query: 317 ---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  SV   + +  E + YA+ R   G  +I+ P +   ++ +   + A  +L 
Sbjct: 289 NGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGEKIINFPAVYDMLSRMKAKLDAGRSLL 348

Query: 374 FRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEAM 416
           +  A   D  K+              R E   Y R+     P+ K    + A     +A+
Sbjct: 349 YCCARYVDIYKALEDIARDTKLTPEERQEMKKYTRLADAFTPLAKGMNSEYANQNAYDAI 408

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF---EQLFSTLE 473
              GGSG+I E    R +R++   SI  G+    V+  +  +  GT L    E L S + 
Sbjct: 409 SIHGGSGFIMEYKCQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLESEVS 468

Query: 474 QDLGSSGKKV---ITILRDSISLCKE--DKGLARFLTEKI 508
           +DL    ++V   + +   +I+  KE  D+ +  FL  ++
Sbjct: 469 EDLKPLKERVAKLVDLYEAAINKVKEANDQAIHDFLARRL 508


>gi|70732969|ref|YP_262742.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347268|gb|AAY94874.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 592

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPRADGSYAISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ + +     G  N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVNADGSLGERNPVTCGSIEHKMGIQASATCVMNFDQAIGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   AI YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGPQAKDKVADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R    +   ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAANEGGRAFSTYVAMQLDTAKFSEDPDTRKRAESLVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+   F 
Sbjct: 406 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465

Query: 467 QLFS 470
           +LF+
Sbjct: 466 KLFA 469


>gi|328770164|gb|EGF80206.1| hypothetical protein BATDEDRAFT_35120 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 424

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 33/272 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ +   K  +G Y ++G K W  +S  ++ F++ A V+   G     C
Sbjct: 168 LSEAGSGSDAFALQTSAVK-KNGKYIINGSKMWITNSYEAEIFLVFANVDPSQGYKGITC 226

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+V + +      G+   + + K+G R+++T  L F +       +LG+  V  G    +
Sbjct: 227 FIVEKDM------GVKVAKKEIKLGIRASSTCSLSFDDVEVPAENVLGE--VGKGYKYAI 278

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +IL   +   + ++   + LA+     A+ Y  +R   G  + D   M+  +A +A++I 
Sbjct: 279 EIL---NEGRIGIAAQMLGLAQGAFDNALPYMYQRKQFGQAIGDFQGMQFQVAQVAMEIE 335

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L++  A   +E KS  +EAA A++       +  ++A    ++A+E +GG G+  E
Sbjct: 336 AARLLTYNAARLKEEGKSFVKEAAMAKL-------YASQVAEKSASKAIEWVGGVGFTRE 388

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             I + YR+    +I  G+ N  +  +  LL+
Sbjct: 389 FPIEKFYRDCKIGAIYEGTSNIQLQTIAKLLK 420


>gi|301791405|ref|XP_002930673.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 478

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D+ ++ ++  K  +  Y ++G K W  S+  +  F+++A V   +G     C
Sbjct: 222 LSEAGAGSDLFSLKTRADKKGN-YYVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITC 280

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     GL   + +NK+G R+++T  L F N     + + N+        K  
Sbjct: 281 FLVDRDTE-----GLHIGKAENKMGIRASSTCPLTFENV---KIPEANILGQIGHGYKYA 332

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  + D   ++  +A +A+ + AA
Sbjct: 333 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYMKERMQFGKRIFDFQGLQHQVAHVAIQLEAA 392

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ +E +GG GY ++  
Sbjct: 393 RLLTYNSARLLEAGQPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 445

Query: 430 IARHYRESPANSILLGSGN 448
           + +++R++   +I  G+ N
Sbjct: 446 VEKYFRDAKVGTIYEGASN 464


>gi|158314832|ref|YP_001507340.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110237|gb|ABW12434.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 619

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 170/375 (45%), Gaps = 62/375 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S     P +   ++LA+ EG     
Sbjct: 174 LTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGT 233

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+ L D      G+ NG     L+ K+G + + T EL F       G+L+GD
Sbjct: 234 KGLSMFVVPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGD 293

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349
             V  G  +  +++ Y  +     +++ +      A+ +AR R + G  L          
Sbjct: 294 --VHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAFARER-IQGADLTRASDKTAPR 350

Query: 350 ---IDQPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399
              I+ P ++R +           AL     +F+ A +   A+   ++ A     ++ PI
Sbjct: 351 VAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI 410

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + +  ++A +++ +GGSGY+++  I ++ R++  +++  G+ +    D+     
Sbjct: 411 VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 470

Query: 457 LLEKG---TNLFEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKG-LARFLTEKI 508
           + +KG   T LF Q+   ++   G +G   +   R+S+      C+   G +  FLT   
Sbjct: 471 VRDKGRALTTLFTQVQEFVK---GEAGNGALRAERESLGAALDECQAMVGSMVGFLT--- 524

Query: 509 ALASSAAALYRAGMN 523
           A A   + +YR G+N
Sbjct: 525 ATAQDKSQVYRVGLN 539


>gi|72383895|ref|YP_293249.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72123238|gb|AAZ65392.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 598

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 157/351 (44%), Gaps = 43/351 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++    +DG + ++G K F+S    D       ++LA++       
Sbjct: 172 LTEPHCGTDLGLLRTRAVPNADGTFGITGTKIFISGGEHDFTDNIVHLVLARLPDSPPGV 231

Query: 253 --VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             +  FLVP+ L   SP G   +R       L++K+G  +NAT  + F    G+L+G+ +
Sbjct: 232 RGISLFLVPKFLV--SPEGDLAERNAVTCGSLEHKMGIHANATCTMNFDGATGYLVGEPD 289

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQ 352
                +  M     L   + ++  M  +  +A+ YA+ R           +     +I+ 
Sbjct: 290 KGLAAMFVMMNHARLLVGVNAIGLMEAAYQKALGYAKDRTQGRSPTASARNSPADPIIEH 349

Query: 353 PVMKRAIADIALDIAAATALS---FRLANS---FDEAKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      I    A +    +LA++    ++++ R   A  + ++ PI K +   
Sbjct: 350 ADVRRMLLTQKAYIEGTRAFAQWACQLADTQHFGNDSEIRHHAAELSALVTPIVKAFSSD 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463
           +A    + AM+ +GG GYI +  + +H R++    +  G+     +D+L    L ++GT 
Sbjct: 410 LAVECTSLAMQVLGGHGYIVDNQVEQHLRDARIIPLYEGANGIQAMDLLGRKVLPDQGTR 469

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           L E   + + + +G++      +LR+  +       + R  T ++++ + A
Sbjct: 470 L-EMFLAIVNEFIGANAGN--PVLREFTAPLSSATDVLRNATHEVSMQAKA 517


>gi|158318988|ref|YP_001511496.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158114393|gb|ABW16590.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 609

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 170/375 (45%), Gaps = 62/375 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S     P +   ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+ L D      G+ NG     L+ K+G + + T EL F       G+L+GD
Sbjct: 224 KGLSMFVVPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349
             V  G  +  +++ Y  +     +++ +      A+ +AR R + G  L          
Sbjct: 284 --VHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAFARER-IQGADLTRASDKTAPR 340

Query: 350 ---IDQPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399
              I+ P ++R +           AL     +F+ A +   A+   ++ A     ++ PI
Sbjct: 341 VAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + +  ++A +++ +GGSGY+++  I ++ R++  +++  G+ +    D+     
Sbjct: 401 VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 460

Query: 457 LLEKG---TNLFEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKG-LARFLTEKI 508
           + +KG   T LF Q+   ++   G +G   +   R+S+      C+   G +  FLT   
Sbjct: 461 VRDKGRALTTLFTQVQEFVK---GEAGNGALRAERESLGAALDECQAMVGSMVGFLT--- 514

Query: 509 ALASSAAALYRAGMN 523
           A A   + +YR G+N
Sbjct: 515 ATAQDKSQVYRVGLN 529


>gi|326564972|gb|EGE15173.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           12P80B1]
          Length = 606

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 58/347 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ S+  ++      +   + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++    +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L     E    N +    +++K+G  S+AT  + F    GFL+G+ N     +    
Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355
               + + I  ++ + +S   ++ YA+ R     +SG    +QP              + 
Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409
           ++A A+ A  +   TA   R A+   EA ++ +E A  +         PI K +  +++ 
Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGFFTPILKGFLTELSI 409

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  +  GG GYI+E  +    R++   ++  G+     LD+L 
Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456


>gi|313205892|ref|YP_004045069.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445208|gb|ADQ81563.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022204|gb|EFT35232.1| Acyl-CoA dehydrogenase, short-chain specific [Riemerella
           anatipestifer RA-YM]
 gi|325336668|gb|ADZ12942.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 376

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 37/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W PK+ S +             V    GLTE   G+D   + +   K  D  + ++G 
Sbjct: 105 KKWLPKLASGQ-------------VIGAWGLTEHNTGSDAGGMNTTAVKDGDE-WVINGA 150

Query: 232 KWFLSSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F++  +S   A +M    E          +LE G P G    + +NK+G R++ T EL
Sbjct: 151 KNFITHAISGDIAVVMTRTGEKNTSNNATAFVLEKGMP-GFSSGKKENKLGMRASETAEL 209

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            F N        LG   V  G  + +KIL   D   +S++ + + +A+     A+ YA+ 
Sbjct: 210 IFDNVRVPDSHRLG--QVGEGFKQALKIL---DGGRISIAALSLGIAKGAYKAALKYAKE 264

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           RH  G  + +   +   +AD+A +I AA  L  R A   +  +  + E A A++ A    
Sbjct: 265 RHQFGQAIANFQAINFMLADMATEIDAAELLIQRAATLKNAKQKMTREGAMAKLYASEA- 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             C +++      A++  GG GY ++    ++YR+S   +I  G+
Sbjct: 324 --CVRISN----NALQIFGGYGYTKDFPAEKYYRDSKLCTIGEGT 362


>gi|229181590|ref|ZP_04308915.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228601786|gb|EEK59282.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 379

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYVLNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +           + +    G    + ++K+G RS+ T E+ F +     +   N+  G 
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +AD+
Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  GG 
Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|34497221|ref|NP_901436.1| isovaleryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103077|gb|AAQ59440.1| probable isovaleryl-CoA dehydrogenase [Chromobacterium violaceum
           ATCC 12472]
          Length = 389

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K +DG Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 127 LAMSEPNAGSDVVSMKLRADK-TDGGYLLNGSKMWITNGGDADTLVVYAKTDVNAGPKGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316
              + + S  G  +    +K+G R + T  + F N F   + D NV  G    +K+L+  
Sbjct: 186 TAFIIEKSFAGFSHGSKLDKLGMRGSNTYPIFFDNCF---VPDENVLGGEGNGVKVLMSG 242

Query: 317 --YLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             Y  S + +  +  M+ SL   + Y   R   G  + D  +M+  +AD+ + ++A+ A 
Sbjct: 243 LDYERSVLAAGPLGIMQASLDIVVPYLNERSQFGQPIGDFQLMQGKLADMYVKLSASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D    R E     R  A     +  + A  +  +A++C+GG+GYI E +  R
Sbjct: 303 VYAVGQALD----RGETGRQTRKDAAGAILYAAENATQLALDAIQCLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|254237268|ref|ZP_04930591.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719]
 gi|126169199|gb|EAZ54710.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719]
          Length = 598

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++    +DG + +SG K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D     G+ N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354
              +  M     L + +  +     S   A+ YAR R     ++G    D+P        
Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343

Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        AL++  A   D      +A  R   A     + PI K +  + 
Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458
              V    M+  GG GYI E  + +  R+     I  G+     LD+L          LL
Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463

Query: 459 EKGTNLFEQL 468
              T L  QL
Sbjct: 464 RGFTKLVHQL 473


>gi|295687743|ref|YP_003591436.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429646|gb|ADG08818.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 585

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 62/353 (17%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+AA+T+      +G + ++G K ++
Sbjct: 148 PKLVSGEWTGT-------------MNLTEPQAGSDLAALTTMATPDGEGGWRITGQKIYI 194

Query: 236 SSPMSDA-----FIMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278
           +    DA      ++LA+       V+G V  FL P++L  +DG     NGL    L++K
Sbjct: 195 TWGDHDAADNIVHLVLARTPDAPPGVKG-VSLFLAPKVLVGDDGKLGEANGLRVGGLEHK 253

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334
           +G   + T  + F      L+G L           +   +++A + V     ++AE    
Sbjct: 254 LGIHGSPTCVMLFEGAKAELVGGLGQGL-----PNMFTMMNAARLQVGTQGTAIAERAYQ 308

Query: 335 -AIHYARRRHV-----SGGI---LIDQPVMKRAIADIALDIAAA------TALSFRLANS 379
            A+ +++ R       +G     L D P ++R++  +   I AA      TA++  LA +
Sbjct: 309 QALAFSQERAQGRSAWTGAYPSRLFDHPDVRRSLVLMKAHIEAARGICLSTAVAADLARA 368

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +  +R+       ++ PI K W   +   V ++ ++  GG G+IEE   A+HYR++  
Sbjct: 369 AADETTRTSAKLREELLTPIAKAWSTDVGVWVASQGVQIHGGMGFIEETGAAQHYRDARI 428

Query: 440 NSILLGSGNAMVLDVLNL---LEKG---TNLFEQLFSTLEQDLGSSGKKVITI 486
             I  G+     +D++     L +G    +L + +  T+E DL SS  K + +
Sbjct: 429 APIYEGTNGIQAIDLVGRKLSLGEGQAVADLMDDIRDTIE-DLKSSDLKAVGL 480


>gi|229161448|ref|ZP_04289429.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228621985|gb|EEK78830.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 371

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 160

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           + G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 161 INGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359


>gi|254237267|ref|ZP_04930590.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719]
 gi|254243601|ref|ZP_04936923.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192]
 gi|126169198|gb|EAZ54709.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719]
 gi|126196979|gb|EAZ61042.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192]
          Length = 592

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R        ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG G+I E    +  R+     I  G+     LD++ 
Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454


>gi|302866634|ref|YP_003835271.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302569493|gb|ADL45695.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 377

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 66/309 (21%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    + W P   S E             +   + ++E   G+D+A IT+   +  D 
Sbjct: 102 LTTEEQKQRWLPGFCSGE-------------IVTAIAMSEPGAGSDLAGITTTAVRDGDD 148

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKN--K 278
            + L+G K F+S+  ++D  +++A+ +   GR G  L+  ++E G P    ++R +N  K
Sbjct: 149 -WVLNGQKTFISNGILADLVVVVARTDPGAGRRGISLL--VVERGMPG---FERGRNLDK 202

Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G ++  T EL FS+               F +L+ +L     P+E + I      A+ +
Sbjct: 203 LGQKAQDTAELFFSDVRVPAANLLGAEGEGFAYLMRNL-----PLERLSI------AVAA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD--IAAATALSFRLANSF-D 381
           ++G     A+ + Y R+R   G          R I     +  + A  A   RL   F D
Sbjct: 252 LAGAETVFAQTLDYCRQRQAFG----------RPIGSFQHNRFVLAELATELRLGRVFVD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 +  A    MA   K+WC ++   V+   ++  GG GY+ E  +AR Y ++   +
Sbjct: 302 NCLVAPDLTAETAAMA---KWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLDARVQT 358

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 359 IYGGTTEIM 367


>gi|256028604|ref|ZP_05442438.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D11]
 gi|289766521|ref|ZP_06525899.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|289718076|gb|EFD82088.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 377

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 27/280 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236
           F  E    N      T   IG  GLTE   G+D  A T+    + DG  Y L+G K F++
Sbjct: 99  FGTETQKQNYLKPLATGEKIGCFGLTEPGAGSDAGASTTTA--VLDGDYYILNGRKCFIT 156

Query: 237 -SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            +P++D  I+ A  +   G   +   + D +  G      +NK+G R + T ++   N  
Sbjct: 157 NAPIADFAIISAMTDRTKGTKGISTFIVDSTLEGWSVGAHENKMGIRGSITSDIVLDNVK 216

Query: 296 ---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSG 346
                LLGD        +  KI++  LD+  + V+   + +A     EAI Y + R   G
Sbjct: 217 VPKENLLGDKG------KGFKIMLNTLDAGRIGVAAQALGIAQGALDEAIKYVKERVQFG 270

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L      +  IA++A  + AA  L +  A   DE K+         + + + KY+  +
Sbjct: 271 RKLAAFQNTQFKIAEMATKVEAARLLVYDAAKIKDEGKNPG-------LKSSMAKYYAAE 323

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A  V   A++  GG GYI++  I R YR++   SI  G+
Sbjct: 324 IANEVAYWALQLHGGYGYIKDYPIERIYRDARITSIYEGT 363


>gi|254524761|ref|ZP_05136816.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219722352|gb|EED40877.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 387

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMEAGAKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G RS+ T EL F        N  G + G + V    ++ 
Sbjct: 187 TAFLVEKGMKGFSTAQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++      +  + M V +     Y   RH  G  +    +++  IAD+ + + A  A
Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D+ ++  ++AA A + A     W       +  +A++ +GG+GYI E    
Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 356 RLWRDAKLYEIGAGT 370


>gi|146305420|ref|YP_001185885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573621|gb|ABP83153.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 596

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249
           LTE + GTD+A + ++ +  +DG Y +SG K F+S    D       ++LA+       V
Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEQDLSENIVHLVLARLPDAPAGV 221

Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +   LVP+ +   DG+P   N L    +++K+G +  +T  + F    G+L+G+ N 
Sbjct: 222 KG-ISLLLVPKFIAAADGTPGERNTLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQ 280

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQ 352
               +  M         +  +     +   A+ YAR R  S G+            +I  
Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPDKAADPIIVH 340

Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R       + + +  +AA TA    L +  + A +R      A ++ PI K +   
Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYTARQLDLEHGAESADARKAAGKRAALLIPIVKAFFTD 400

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M   V +  ++  GG G+I E  + +  R+S    +  G+     LD +
Sbjct: 401 MGQEVASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449


>gi|332528789|ref|ZP_08404766.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332041855|gb|EGI78204.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 602

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 163/346 (47%), Gaps = 69/346 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDELKAIYLEKLVSGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSD--AFIMLAQVEGR------VGCFLV 258
           D+A + S+ +   DG Y + G K F++     M+D  A ++LA+V G       +  FLV
Sbjct: 171 DLALVRSRAEPQPDGSYKVYGTKIFITYGEHDMADNIAHLVLARVTGAPEGIKGISLFLV 230

Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--- 308
           P+ L +  P+G   +R       +++K+G +++ T  L++ +    ++  +  STGP   
Sbjct: 231 PKFLVN--PDGSLGKRNDVQCVSIEHKMGIKASPTAVLQYGDG---MVASIASSTGPGAV 285

Query: 309 ----------VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI--- 348
                     +E M I++      + V G+ V+     +A+ YA+     R V G I   
Sbjct: 286 GYLVGQENRGLEYMFIMMNAARYAVGVQGIAVAERAYQQAVAYAKDRVQSRPVDGSIKAS 345

Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I  P ++R      A+ +    +A+  A ++  A+   +A++R +   +   + P+ 
Sbjct: 346 AAIIHHPDVRRMLMTSRALIEGCRAMASVAAAAYDAAHHHTDAEARKQNQTFYEFLVPLV 405

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A+HYR++   +I  G+
Sbjct: 406 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDAKILTIYEGT 451


>gi|15595704|ref|NP_249198.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099493|ref|ZP_01363411.1| hypothetical protein PaerPA_01000505 [Pseudomonas aeruginosa PACS2]
 gi|218889248|ref|YP_002438112.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254243600|ref|ZP_04936922.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192]
 gi|9946371|gb|AAG03896.1|AE004487_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126196978|gb|EAZ61041.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192]
 gi|218769471|emb|CAW25231.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 598

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++    +DG + +SG K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D     G+ N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354
              +  M     L + +  +     S   A+ YAR R     ++G    D+P        
Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343

Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        AL++  A   D      +A  R   A     + PI K +  + 
Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458
              V    M+  GG GYI E  + +  R+     I  G+     LD+L          LL
Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463

Query: 459 EKGTNLFEQL 468
              T L  QL
Sbjct: 464 RGFTKLVHQL 473


>gi|319764486|ref|YP_004128423.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330826702|ref|YP_004390005.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119047|gb|ADV01536.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312074|gb|AEB86489.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 376

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   K  DG Y ++G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAAKDGDG-YVINGVKQFITSGKNGQVAIVIAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296
                G+ G   FLVP         G    RL++K+G  S+ T ++ F        N  G
Sbjct: 170 TDKGAGKKGMSAFLVPT-----DTPGYVVARLEDKLGQHSSDTAQINFDGCRIPAENLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I    A  SV   R +   A+ YA+ R   G  + +   + 
Sbjct: 225 AEGEGYKIALGALEGGRIGI----AAQSVGMARSAFEFAVQYAKERESFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A  I AA  L +  A+  D  +   +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADCATQIEAARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG G + +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365


>gi|296282193|ref|ZP_06860191.1| isovaleryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 399

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 16/253 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +   + DG Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 140 LAMSEASAGSDVVSMKLKADAV-DGGYRLNGTKFWITNAPYADTLVVYAKTDSEAGSRGI 198

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              L +    G    +   K+G R + T EL F + F  +  D  +         ++  L
Sbjct: 199 TAFLIEKGDEGFSIGQKIEKVGMRGSPTAELVFDDCF--VPEDRVMGPVGGGVGVLMSGL 256

Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   + ++G+++ + +A     I Y R R   G  +    +M+  +AD+ + + +A A +
Sbjct: 257 DYERVVLAGLQLGIMQACLDTVIPYLRERTQFGKPIGSFQLMQAKVADMYVALQSARAYT 316

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A S D  K+   +AA A ++A        + A  V AE+++ +GG+GY  +  + R+
Sbjct: 317 YAVAKSCDANKTTRFDAAGAILLA-------SENAFRVAAESVQALGGAGYTLDWPVERY 369

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 370 MRDAKLLDIGAGT 382


>gi|330956960|gb|EGH57220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 601

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKR---- 357
               L +A+  ++   ++    + YAR R              +   +I  P ++R    
Sbjct: 293 NTARLGTALQGLAHAEIAFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 358 --AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             A A+    +   TA    +    D+A+ +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSDDAEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTRIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G+ G + +      ++   ++ G    LT K+ +A+
Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGE---LTMKVGMAA 509


>gi|313204175|ref|YP_004042832.1| acyL-CoA dehydrogenase domaiN-containing protein [Paludibacter
           propionicigenes WB4]
 gi|312443491|gb|ADQ79847.1| acyl-CoA dehydrogenase domain-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 570

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 139/293 (47%), Gaps = 35/293 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRV 253
           + LTE   G+D+ A+  +     +DG++ L+G K F+++  +   ++LA+ E     GR 
Sbjct: 172 MDLTEPDAGSDLQAVQLKATYNENDGLWYLNGVKRFITNGDAQIKLVLARSEEGTSDGRG 231

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             + V    E+   N +  +R++NK+G + + T EL F+NT   L+G   +  G ++   
Sbjct: 232 LSYFVA---ENKHDNTVLVRRIENKLGIKGSPTCELVFNNTPAKLVGTRRL--GLIK--Y 284

Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++ A + +    V L+     EA+ YAR R   G  +I+ P +   ++ I   + A
Sbjct: 285 VMSLMNGARLGIGAQSVGLSAAAYNEALAYARDRRQFGKAIIEFPAVFEMVSIIKAKLDA 344

Query: 369 ATALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAV 411
           + AL +      D              EA  +++   Y+++   + P+ K +  + A   
Sbjct: 345 SRALLYETTRFVDIYKAYEAIENERKLEADEKADYKEYSKLADALTPMLKMFTSEYANQN 404

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             + ++  GGSG++++ +  R +R++   +I  G+    V+  +  +  G  L
Sbjct: 405 AYDCIQVHGGSGFMKDYACERLFRDARIMTIYEGTSQLQVVAAIRHVTTGNYL 457


>gi|312135048|ref|YP_004002386.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor owensensis OL]
 gi|311775099|gb|ADQ04586.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor owensensis OL]
          Length = 381

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 24/280 (8%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +D +++ A  +   G   +   + +    G    + ++K+G R+++T EL F +  
Sbjct: 158 NGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYCGKKEDKMGIRASSTTELIFEDCK 217

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                LLG     TG +  MK     D     V+ M V +A+     AI YA+ R   G 
Sbjct: 218 VHKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKERVQFGQ 272

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCK 406
            L     ++  +AD+ ++I AA A+ +      D  AK  S+E++  ++ A         
Sbjct: 273 PLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS-------D 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 326 VAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|322419601|ref|YP_004198824.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320125988|gb|ADW13548.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 380

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 47/282 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGC 255
           LTE   G+D A I ++     DG + L G K+F+S+    A +++      A+  G +  
Sbjct: 124 LTEPEAGSDAAGIKTRA-IYDDGRWRLEGTKYFISNGSRAAVLVVMALTDPAKGGGGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVED- 311
           F+VP     G   GL   +  +K+G RS+ TV L       FL G         G  +D 
Sbjct: 183 FIVP-----GEAEGLEKGKNLDKLGYRSSDTVAL-------FLKGVRLHEEALVGARDDG 230

Query: 312 ----MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M++L    +  A M++   R  L +++ Y R+RH  G  + D   ++  +AD+A +
Sbjct: 231 FRQAMQVLAAGRIGLAAMAIGIGRACLEQSLVYLRKRHAFGHPIADFQALQWMVADMATE 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGS 422
           I AA  L+ R A   D       EA+ A++ A          + AV+  A++ +   GG+
Sbjct: 291 IDAARLLTLRAARLKDRGMPFGREASMAKLYA----------SEAVMRAALKAVQIHGGN 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG 461
           GY     + R++RE+    I  G G + V  +L   +LL++G
Sbjct: 341 GYTRAFPVERYFREAKLCEI--GEGTSEVQRLLIARSLLKEG 380


>gi|209966788|ref|YP_002299703.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209960254|gb|ACJ00891.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 396

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 55/329 (16%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP + + +      RE+ P    PM        LG++E   G+D+A++ +  +K  D 
Sbjct: 93  MATPALAR-FGSDELRREFLP----PMIAGDQVWCLGVSEPGAGSDVASVKTTARKDGDD 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-------------GLC 271
                G  W  S   +D   +LA                DG+P+             G+ 
Sbjct: 148 YVINGGKMWTTSGTQADVMCLLANTS-------------DGAPHKNKSLIVLPMKTKGVT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG- 327
             R  +K+G R + T ++ F +      +L+G+  +        ++L + +  +   +G 
Sbjct: 195 VARKLDKLGMRCSDTAQIHFEDVRVPRRYLIGEEGMGF----TYQMLQFQEERMWGAAGS 250

Query: 328 ---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M + + + + Y R R   G  LID   +   +A++  ++ A  AL++R   +F   K
Sbjct: 251 LRSMDIMIDDVVAYTRNRIAFGKPLIDNQYIHFRLAELKAEVEALRALTYRAVETFINGK 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A ++A + K    ++   V    ++  GG GY+ E  I+R++R+S   SI  
Sbjct: 311 D-------ATMLASMAKLKSGRLLREVADGCLQYYGGMGYMNEMPISRYFRDSRLTSIGG 363

Query: 445 GSGNAMV------LDVLNLLEKGTNLFEQ 467
           G+   M+      +  L  +  GT+  EQ
Sbjct: 364 GADEVMLSIICKYMGTLPKVRFGTDAPEQ 392


>gi|218780484|ref|YP_002431802.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761868|gb|ACL04334.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 601

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 49/308 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A+T+   K  DG Y +SG K F+++    +++  +  +LA+VEG     
Sbjct: 164 LTEPEAGSDVGALTTTAVKNEDGTYSISGAKIFITNGEHQLTENIVHPVLARVEGAPEGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
             +  F+VP+    EDGS    N +    ++ K+G   +AT  L         G LLG  
Sbjct: 224 KGISIFIVPKYWVNEDGSMGDFNDVVCTGVEEKMGIHGSATCSLTLGGAGKCRGLLLGQ- 282

Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG----- 347
                  E MKI+ + ++ A ++V     + A      A +YA+ R     ++ G     
Sbjct: 283 -----ECEGMKIMFHMMNDARLNVGFQAFTYASSAYLYACNYAKERIQGKDLTAGKNSPS 337

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPIT 400
             +I+ P ++R +  +   +    +  +  A+ FD  +A+  S++A   +       P+ 
Sbjct: 338 VTIINHPDIRRMLTWMKAHVDGMRSFIYYTASLFDWMKAEPDSDQAQNRQDLIDFFIPLV 397

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458
           K +  + +  V   AM+  GG GY +E  I +  R+    SI  G+     +D+L   L 
Sbjct: 398 KGYSAQRSFDVCVNAMQVYGGYGYTKEYPIEQLLRDCKITSIYEGTDGIQAMDLLGRKLQ 457

Query: 459 EKGTNLFE 466
            +G  LF+
Sbjct: 458 MRGGALFQ 465


>gi|312127705|ref|YP_003992579.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777724|gb|ADQ07210.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 381

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKKKYLPKIAKGELIAAFALTESDAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +D +++ A  +   G    PR     ++E G     C ++ ++K+G R+++T EL 
Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 212

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F +       LLG     TG +  MK     D     V+ M V +A+     AI YA+ R
Sbjct: 213 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEYAIRYAKER 267

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401
              G  L     ++  +AD+ ++I AA A+ +      D  AK  S+E++  ++ A    
Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 325 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|304394048|ref|ZP_07375971.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303293488|gb|EFL87865.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 602

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 150/359 (41%), Gaps = 51/359 (14%)

Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ +  AL+   +    + + PK+ S E+  T             + LTE   GT
Sbjct: 130 MYPGLTAGAAAALVEHASEEQKQAYVPKMLSGEWSGT-------------MNLTEPHCGT 176

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+  + ++  +  DG + ++G K ++S+   D       +++A++EG       +  F+ 
Sbjct: 177 DLGMLRTKAARNDDGSFAITGQKIWISAGEHDMSSNIIHLVIARIEGEPEGTKGISLFVC 236

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  EDG+P   N L    L++K+G   NAT  + +     FL+G+ N     +  M 
Sbjct: 237 PKYILDEDGNPGERNKLSCGSLEHKMGINGNATCVMNYEGAKAFLVGEENKGLAAMFVMM 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361
               L  A+  ++   V+   A  +AR     R ++G    DQ        P ++R +  
Sbjct: 297 NEARLGVAVQGLAQSEVAYQNAADWARDRVQGRALTGAKYPDQKADPIIVHPDIRRVLLT 356

Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           I      A  +   TAL   L++  D+   +        ++ P+ K             A
Sbjct: 357 IRSFNEAARALVLWTALKGDLSHRSDDEDEKQNADDIMGLLTPVLKGVLTDKGFDNTVMA 416

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
            +  GG+GY +++ + +  R++    I  G+     LD++   L  KG    +  F  +
Sbjct: 417 QQVFGGTGYTKDQGVEQFVRDARIAMIYEGANGIQALDLVGRKLPSKGGRAVQAYFKEV 475


>gi|291295512|ref|YP_003506910.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470471|gb|ADD27890.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 373

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 27/266 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        LTE   G+D A++    QK+  G + L+G K W  S   +  ++++A+
Sbjct: 112 PLARGEWIGAFSLTEPHAGSDPASLKLSAQKVPGG-WELNGLKSWVTSGGQAQVYVVMAR 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            E  +  F+V    E  +P GL +   + K+G  +  T EL F   F     LLG     
Sbjct: 171 SEAGISSFIV----EKDTP-GLSFGSPEEKMGLHAAHTCELRFEGVFVPEENLLGQEGRG 225

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIA 360
                  + L  LDS  + ++   V +A A       YA  R   G  + +   +   +A
Sbjct: 226 LA-----QALAGLDSGRIGIAAQAVGMARAAFEIAKQYADERTQFGQKIREFQGVGFKLA 280

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++   IAAA AL    A   D ++  + EA+ A++ A         +A  V  EA++ +G
Sbjct: 281 EMHTRIAAARALVLEAAAKKDRSEKYTLEASTAKLFA-------SDVAVNVTREAVQVLG 333

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E  + R+YR++    I  G+
Sbjct: 334 GYGYHREYRVERYYRDAKITEIYEGT 359


>gi|91224762|ref|ZP_01260022.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91190308|gb|EAS76577.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 384

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP   E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
             + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|15595705|ref|NP_249199.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099494|ref|ZP_01363412.1| hypothetical protein PaerPA_01000506 [Pseudomonas aeruginosa PACS2]
 gi|218889249|ref|YP_002438113.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|9946373|gb|AAG03897.1|AE004488_1 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218769472|emb|CAW25232.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 592

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R        ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG G+I E    +  R+     I  G+     LD++ 
Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454


>gi|116054233|ref|YP_788677.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589454|gb|ABJ15469.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 598

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++    +DG + +SG K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D     G+ N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354
              +  M     L + +  +     S   A+ YAR R     ++G    D+P        
Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343

Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        AL++  A   D      +A  R   A     + PI K +  + 
Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458
              V    M+  GG GYI E  + +  R+     I  G+     LD+L          LL
Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463

Query: 459 EKGTNLFEQL 468
              T L  QL
Sbjct: 464 RGFTKLVHQL 473


>gi|158522511|ref|YP_001530381.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511337|gb|ABW68304.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 380

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 23/278 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           PM   +      LTE   G+D  A+T    +  D  Y ++G K F++S  +   ++L   
Sbjct: 113 PMAAGAFIGAFALTEPEAGSDPQAMTCTAVRDGDH-YIINGTKRFITSGKNGGVVILLAR 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
               G   +   L      G    R+++K+G  ++ TV+L F++       +LG    S 
Sbjct: 172 TAEKGSRGISAFLVTHDFAGFSVGRIEDKMGQCASDTVDLLFNDCRVPASRMLG----SE 227

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
           G  E  KI +  LD+  + ++ + + +A     E+I Y+R R   G  L     ++  IA
Sbjct: 228 G--EGFKIAMSGLDAGRIGIASLSLGIAQAALDESIRYSRNRKQFGQNLSGFQGLRWMIA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+D+ AA  L    A      K   E    A  MA   K +  +MA  V  +A++  G
Sbjct: 286 DMAMDVEAARLLVLNAA----AVKEHGENCTAAASMA---KCYASEMAQRVTGQAIQIHG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GYI+E  + R YR++   +I  G+     + + N L
Sbjct: 339 GYGYIKEYPVERFYRDARITTIYEGTNQIQRIVIANEL 376


>gi|91789001|ref|YP_549953.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698226|gb|ABE45055.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 596

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 139/286 (48%), Gaps = 44/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L  EDGS    N +    +++K+G +++ T  L++ +     G+++G
Sbjct: 221 GVKGISLFVVPKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGI--- 348
           + N     +E M   I +++A  +V    +++AE     A+ +AR R     V G I   
Sbjct: 281 EENRG---LEYM--FIMMNAARYAVGMQGIAVAERAYQKAVSFARERVQSRPVDGSIKAS 335

Query: 349 --LIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I  P +KR +  +   I          A ++  ++   +A+ R +  A+   M P+ 
Sbjct: 336 APIIHHPDVKRMLMTMRAYIEGCRAMASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A++ R++   +I  G+
Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYMRDAKILTIYEGT 441


>gi|149927974|ref|ZP_01916223.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149823270|gb|EDM82504.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 380

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 19/270 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +    I L +TE  GG+D+A + ++     D  Y +SG K +++S +   +  +A  
Sbjct: 115 PVLRGEKIIALAVTEPGGGSDVANLKTRAVDCGDH-YKVSGSKTYITSGIRADYYTVAVR 173

Query: 250 EGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G  G   +  LL E G P     Q LK K+G   + T EL F N        + +  G 
Sbjct: 174 TGGDGYGGISMLLMEKGMPGFTTGQPLK-KMGWWCSDTAELFFDNVVVPKSNLIGIENGG 232

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
              M I+   ++  + ++    +L+E     A++YA+ R   G  L    V++  +AD+A
Sbjct: 233 F--MMIMTNFEAERLGLACYANTLSELAFNEALNYAKNRSTFGKPLSKHQVIRHKLADMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+   ++R+A      K   +E + A       K +  K +  +  EA++  GG G
Sbjct: 291 TQLEASREFTYRVAARMQAGKPALKEVSMA-------KNFATKTSDFITYEAVQIFGGMG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++ E  + R YR++   SI  G G   +++
Sbjct: 344 FMRESLVERLYRDNRIASI--GGGTYEIMN 371


>gi|228955589|ref|ZP_04117590.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804092|gb|EEM50710.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 379

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +           + +    G    + ++K+G RS+ T E+ F +     +   N+  G 
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +AD+
Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  GG 
Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|149243125|pdb|2PG0|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Geobacillus Kaustophilus
 gi|149243126|pdb|2PG0|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Geobacillus Kaustophilus
          Length = 385

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 43/303 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK  + E             +   + +TE   G+D+A I++   K 
Sbjct: 102 IASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAGSDLANISTTAVKD 148

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270
            D  Y ++G K F+++ +    I++A       C   P+           ++E  +P G 
Sbjct: 149 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPQAKPPHRGISLLVVERDTP-GF 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  +  T EL F +       LLG+       + +      L  AI + + 
Sbjct: 200 TRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 259

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
             V  +    Y ++R   G  + +   ++  +A++A +IA       R+       K   
Sbjct: 260 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIV 319

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E + A       K+W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I  G+ 
Sbjct: 320 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 372

Query: 448 NAM 450
             M
Sbjct: 373 EMM 375


>gi|296112458|ref|YP_003626396.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4]
 gi|295920152|gb|ADG60503.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4]
 gi|326561590|gb|EGE11929.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 7169]
 gi|326562046|gb|EGE12375.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           46P47B1]
 gi|326565329|gb|EGE15508.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           103P14B1]
 gi|326570570|gb|EGE20608.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC1]
 gi|326570729|gb|EGE20755.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC8]
 gi|326573566|gb|EGE23528.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis CO72]
 gi|326577351|gb|EGE27237.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           101P30B1]
 gi|326577837|gb|EGE27704.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis O35E]
          Length = 606

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 58/347 (16%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ S+  ++      +   + PK+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++    +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L     E    N +    +++K+G  S+AT  + F    GFL+G+ N     +    
Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355
               + + I  ++ + +S   ++ YA+ R     +SG    +QP              + 
Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409
           ++A A+ A  +   TA   R A+   EA ++ +E A  +         PI K +  ++  
Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGFFTPILKGFLTELGI 409

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  +  GG GYI+E  +    R++   ++  G+     LD+L 
Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456


>gi|213967726|ref|ZP_03395873.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382364|ref|ZP_07230782.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302062376|ref|ZP_07253917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato K40]
 gi|213927502|gb|EEB61050.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 592

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++ A  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N    
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465

Query: 467 QLFS 470
           QLFS
Sbjct: 466 QLFS 469


>gi|26990069|ref|NP_745494.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Pseudomonas putida KT2440]
 gi|24984996|gb|AAN68958.1|AE016527_4 acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Pseudomonas putida KT2440]
          Length = 584

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 34/308 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDA-----FIMLAQVE--- 250
           LTE + G+D++ +  +   + DG    Y +SG+K F+S    D       ++LA++    
Sbjct: 164 LTEPQAGSDLSLLRCRAVPLGDGGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAP 223

Query: 251 -GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            G  G    LVP+ LEDG  N L    L++K+G R +AT  L      G+L+G  +    
Sbjct: 224 PGNRGLSLLLVPKWLEDGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLA 283

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVS------GGILIDQPV-----M 355
            +  M     L   +  +     +  +A  YA  RR +S      GG     P+     M
Sbjct: 284 AMFVMMNSARLHVGLQGLGHAEAAWQQARDYALERRQMSAPGRAKGGAQGADPIHLHPAM 343

Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R + ++ +      AL++  A   D      E   R++ A  A ++ PI K    +   
Sbjct: 344 RRVLLELRVRTEGMRALAYWTAQWLDIADAAVEPAQRAKAATLAALLTPIVKAAFTEQGF 403

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQ 467
           ++ ++A++ +GG GY +E +I +  R+S    I  G+      D++   +L  G   F  
Sbjct: 404 SLASKALQVLGGYGYTQEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFAL 463

Query: 468 LFSTLEQD 475
           L S L  +
Sbjct: 464 LLSELRTE 471


>gi|86140292|ref|ZP_01058851.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis
           MED217]
 gi|85832234|gb|EAQ50683.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis
           MED217]
          Length = 389

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 31/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + S   +  D  Y L+G K F+++ + SD  I+ A+     G   +
Sbjct: 125 LCITEPFGGSDVAGMRSTAVRQGDH-YVLNGSKTFITNGVFSDYLIVAAKTSPEKGNKGL 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILI 316
              + D    G+   +L +K+G R++ T E+ F+        D+ V    +  E+ K   
Sbjct: 184 SIFVVDREAEGVSATKL-DKLGWRASDTGEIAFT--------DVKVPAANLMGEEDKGFS 234

Query: 317 Y------LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           Y      L+  IM V+       +L  A+ Y   R   G  +     ++  +A++A +I 
Sbjct: 235 YIMQHFALERLIMGVNAHARAEYALEYALEYMGEREAFGKTINKFQALRHTVAEMASEIE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A ++ +A + D+     +EA+ +++M         K+A  VI + ++ +GG GY+E+
Sbjct: 295 MVKAFNYSIAYNLDKGDYVVKEASMSKLMG-------TKIADEVIYKCLQMLGGYGYMED 347

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             +AR +R+S    I  G G + +L
Sbjct: 348 YPLARMFRDSRLGPI--GGGTSEIL 370


>gi|153836696|ref|ZP_01989363.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149750045|gb|EDM60790.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 384

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP  +E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADIE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465
             + RH+R+   + IL G+   M L +   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384


>gi|42781609|ref|NP_978856.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|52142954|ref|YP_083875.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|206974102|ref|ZP_03235020.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217959999|ref|YP_002338555.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|222096085|ref|YP_002530142.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228985654|ref|ZP_04145807.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229091537|ref|ZP_04222746.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|229139191|ref|ZP_04267766.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229156137|ref|ZP_04284235.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|229196721|ref|ZP_04323464.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|42737532|gb|AAS41464.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|51976423|gb|AAU17973.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|206748258|gb|EDZ59647.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217063605|gb|ACJ77855.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|221240143|gb|ACM12853.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228586796|gb|EEK44871.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228627320|gb|EEK84049.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228644250|gb|EEL00507.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228691831|gb|EEL45579.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|228774049|gb|EEM22462.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324326516|gb|ADY21776.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 381

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|290462331|gb|ADD24213.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Lepeophtheirus salmonis]
          Length = 408

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 28/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
            GLTE   G+D  A ++  +   DG  Y L+G K W  ++P +   ++ A    +     
Sbjct: 146 FGLTEPGNGSDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKG 205

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+VP+     S  G+   + ++K+G R ++T  +   +    ++   NV  G     
Sbjct: 206 ITAFIVPK-----SIPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + V+     +A+     A+ YA +R   G  +    +++  IAD+A+ +
Sbjct: 258 KIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRV 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L +R A + D     ++EAA  ++ A  T  W       V+ ++++ +GG G++ 
Sbjct: 318 EASRLLLYRAAAAKDTGMPYTKEAAMTKLFASETATW-------VVHQSIQVLGGMGFVT 370

Query: 427 ERSIARHYRESPANSILLGS 446
           +    R+YR++    I  G+
Sbjct: 371 DMPSERNYRDARITEIYEGT 390


>gi|302526139|ref|ZP_07278481.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435034|gb|EFL06850.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 31/260 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K ++      TE  GG+D+AAI +  ++  D  + ++G K F+S      F++L   
Sbjct: 111 PVIKENLRCCYAFTEPGGGSDVAAIRTTAERKGD-TWVINGVKTFISYAERAGFVILFAT 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             R      V CFLV    E G+P G    R    +G+      +L F +    ++ D N
Sbjct: 170 TDRARGAKGVTCFLV----EKGTP-GFSLSRPIPTMGDDWEPH-QLTFEDC---VIPDAN 220

Query: 304 VSTGPVED-MKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
              GPV    K+ +  L    + ++  ++ +A+     A+ +AR R   G  +  +  ++
Sbjct: 221 -RLGPVGGGWKLAVEQLTHGRLKIAAYQLGIAQRCLDIAVEWARNRTTWGKPIASRQAVQ 279

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A ++ AA  L++R A  +D+ K RSE  A+      + K +  +MA  V    +
Sbjct: 280 WMVADSATELDAARLLTYRAAWLYDQGK-RSETEAF------MAKLYATEMAQRVTDRCL 332

Query: 417 ECIGGSGYIEERSIARHYRE 436
           + +GG GY +E  I   YR+
Sbjct: 333 QILGGLGYSKELPIQSFYRQ 352


>gi|110834959|ref|YP_693818.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648070|emb|CAL17546.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 593

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/337 (21%), Positives = 139/337 (41%), Gaps = 49/337 (14%)

Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P++TS + +A+       +   + PK++S E+  T             + LTE   GTD+
Sbjct: 130 PALTSGACLAVDAHACEELKSQYLPKLYSGEWSGT-------------MCLTEPHSGTDL 176

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260
             + ++     DG + ++G K F++    D       ++LA++         +  FLVP+
Sbjct: 177 GILRTKAVPNDDGSFNITGTKIFITGGEHDLTGNHVHLVLAKLPDAPAGSKGISLFLVPK 236

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L D     G  NG+    +++K+G + +AT  + F +  G+++G+ N     +  M   
Sbjct: 237 FLPDADNNPGEANGVTCGSIEHKMGIKGSATCVMNFDDAKGWIIGEPNQGLACMFTMMNY 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK-----R 357
             L   +  +    VS   A+ YAR R      +G          I++   V +     R
Sbjct: 297 ERLSIGLQGLGLGEVSYQSAVEYARERLQGRSATGAKNPQGPADPIIVHGDVRRMLMNMR 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           AI +    +AA   +    +   ++A+++ +      ++ P+ K +             +
Sbjct: 357 AINEGGRALAAYVGMQLDTSKFSEDAEAKKKAEDRVALLTPVAKAFFTDRGLDTTITGQQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG GYI E  + +  R+   + I  G+     LD+
Sbjct: 417 VFGGHGYIREWGMEQFVRDCRISQIYEGTNGIQALDL 453


>gi|169828469|ref|YP_001698627.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168992957|gb|ACA40497.1| Acyl-CoA dehydrogenase family member 9 [Lysinibacillus sphaericus
           C3-41]
          Length = 552

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 20/272 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +  +   DG  + ++G K W  ++ ++D F++ AQ    +   +V 
Sbjct: 136 LTESEAGSDALRPKTNARLTEDGKAWLVNGEKQWITNAQLADVFVVFAQTNRGMTALIVE 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL- 315
           R     S  G+   + + K+G + ++T  L   +       +LG+  V  G +  M IL 
Sbjct: 196 R-----SIKGVSVGQEEEKMGIKGSSTATLILEDVIVPINCVLGE--VGKGHIVAMNILN 248

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  ++   + +   A++Y + R      ++D  +++  +AD+A+ I  A + ++
Sbjct: 249 MARLKLAFSNIGTAKQAFQIAVNYGKGRKQFERPIVDFTLIQEKLADMAVLIYGAESGAY 308

Query: 375 RLANSFDEA-KSRSEEAAYARIMA-----PITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           R A   DEA  S S E    +I        + K  C +    +  EA++  GG GY+++ 
Sbjct: 309 RTAGKVDEAIASASNETIVQKISEFALECALHKVHCSEALGRIADEAVQIHGGYGYMQDY 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R YR++  N I  G+     L +  +L K
Sbjct: 369 EVERLYRDARINRIFEGTNEINRLTMAKMLWK 400


>gi|301787025|ref|XP_002928931.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 414

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 154 FALSEPGNGSDAGATSTTARAEGDS-WVLNGTKAWITNSWEASAAVVFASTDRSLQNKGI 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R+++T  L F +       LLG+      P  
Sbjct: 213 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 261

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL
Sbjct: 262 GFKIAMQTLDMGRIGIASQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + ++  L++R A   D  K  ++EAA A++ A        + A AV  +A++ +GG GY
Sbjct: 322 ALESSRLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGY 374

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 375 VTEMPAERHYRDARITEIYEGT 396


>gi|260555411|ref|ZP_05827632.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411953|gb|EEX05250.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 600

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPHAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353
              +        + +A+  ++   +S   ++ YA+     R +SG    D+        P
Sbjct: 286 LNSMFTFMNTARIGTAVQGLAASEISFQGSLSYAKERLAMRSLSGPKYPDKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFS--TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L EQ  S     + L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIEQFISQHQFNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521


>gi|262376554|ref|ZP_06069783.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308693|gb|EEY89827.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 602

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 50/350 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++    +P+  + + P + S  +  T             + +TE   G+ +  +
Sbjct: 136 TAAAANLIQAFASPKQKQIFLPHMLSGRFAGT-------------MAMTEPNVGSSLGDL 182

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++    +DGIY + G K F+S    D       ++LA+++        +  F+VP+   
Sbjct: 183 NTKAIPQADGIYKIKGQKMFISGGDQDITENIVHLVLARIQDAPQGVKGISLFIVPKFKT 242

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311
            EDGS    N +    L +K+G R   +  L F    N  G+L+G+    L      + +
Sbjct: 243 NEDGSLGEANDVQLAGLLHKMGYRGTTSTVLSFGENDNCLGYLIGEPGHGLKYMFKMMNE 302

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364
            ++ + L +A++   G   SL  A +  + R V       +PV       +KR +     
Sbjct: 303 ARVGVGLGAAMIGYRGYLESLDYAKNRPQGRPVHEKTPDSKPVNIIEHTDVKRMLLAQKS 362

Query: 365 DIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +  + AL    A   DE ++  +E  A    ++ P+ K +     P     A++ +GG+
Sbjct: 363 YVEGSLALCLFAARLIDELQAAQDEDSAILLDLITPVVKSFPSAYGPKANDLAIQVLGGA 422

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLE---KGTNLFEQ 467
           GY  E  + + YR++  N I  G+     LD+L   L +   KG NL  Q
Sbjct: 423 GYTREYPVEQCYRDNRLNPIHEGTYGIQSLDLLGRKLWQHNGKGLNLLMQ 472


>gi|229153504|ref|ZP_04281682.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228630108|gb|EEK86759.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
          Length = 379

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +           + +    G    + ++K+G RS+ T E+ F +     +   N+  G 
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +AD+
Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  GG 
Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|254451856|ref|ZP_05065293.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198266262|gb|EDY90532.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 378

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++      G Y LSG+K F+S    SDA+I++A+  G  G   +  
Sbjct: 124 LTEPASGSDAASLKTKADVTEQG-YALSGNKAFISGGGYSDAYIVMART-GVAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI- 316
            + +    GL +  L++K+G RS  T +++  N   +   LLGD++   G    MK L  
Sbjct: 182 FVVENGTEGLSFGGLEDKMGWRSQPTRQVQLVNCAISAENLLGDID--QGFKYAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+   + +L + +HY   R   G  L     ++  +AD+ +D+ +A     +
Sbjct: 240 GRLNIAACSIGAAQSALDKTVHYMAERQAFGQSLDQFQALQFRLADMEIDLQSARTFLRQ 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D       +   A +   + K  C +    V  + ++  GG GY+ +  I +  R
Sbjct: 300 AAWKLD------TQVPDATVFCAMAKKLCTETGSRVADQCLQLHGGYGYLADYGIEKIVR 353

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 354 DLRVHQILEGTNEIM 368


>gi|330505314|ref|YP_004382183.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919600|gb|AEB60431.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 601

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   +     I YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEIGFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407
            ++R +  +        A+ +  A   D    +++  E+ A   ++A   PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVQHSQNEEEKKAADELLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                +  M+  GG G+I E  + ++ R+   + +  G+     LD+L 
Sbjct: 405 GFESASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGTTGVQALDLLG 453


>gi|163849111|ref|YP_001637155.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222527084|ref|YP_002571555.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163670400|gb|ABY36766.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450963|gb|ACM55229.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 382

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 46/283 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D  A  +  + + D  + ++G K W  ++P++   I+ A 
Sbjct: 113 PAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGD-EWVINGQKMWITNAPIAGHIIVTAV 171

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +  +G      F+VPR    G+P GL + + + K+G R + +  +        +L D+ 
Sbjct: 172 TDPDLGKKGISAFIVPR----GTP-GLSFGKHEPKMGLRGSVSTAV--------MLDDVR 218

Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGIL 349
           V   P E++         + L  LD   + +  M + LA+A + A     R R   G  +
Sbjct: 219 V---PRENLLGERGRGFIQFLQVLDGGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +   IA++A+D+AAA AL +  A   D  +  + EAA A++ A       C+   
Sbjct: 276 GAHQSVANMIANMAVDLAAARALVYGAARLKDAGRPYTREAAIAKLFASEASERICR--- 332

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               +A++  GG GY +E  + R YR++    + +G G + +L
Sbjct: 333 ----DAIQVFGGYGYSQEYPVERLYRDT--RLLTIGEGTSEIL 369


>gi|330812188|ref|YP_004356650.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380296|gb|AEA71646.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 601

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    L++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLPNADGSIGQRNAVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   +     + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + + +  A    M PI K +  ++        
Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G+ G + +    + ++   ++ G    LT K+ +A+
Sbjct: 473 KFCQ--GNEGNEAVKEFVEPLAALNKEWGE---LTMKVGMAA 509


>gi|288931930|ref|YP_003435990.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894178|gb|ADC65715.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 395

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 24/280 (8%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +F RE       P      AI     TE + G+D+A I +  ++ ++  + ++G+K F++
Sbjct: 100 LFGREDQKEKYLPPLAKGEAISCACFTEPQSGSDLAGIKTTAREENEH-FVINGNKIFIT 158

Query: 237 S-PMSDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  ++D +I+LA+    E R   +  F+V R  E     GL  +++K+K+G R++ T E+
Sbjct: 159 NGSIADFYIVLARTDKGEKRHHGLSVFVVERGTE-----GLEARKMKDKLGIRASDTAEV 213

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N       L+G+         +   +  +  A  +V   + +   A+ YA+ R +  
Sbjct: 214 FFKNVKVPKENLIGERGRGFYQAVEFFNVTRIHVAFQAVGIAQGAFELALEYAKNRELFE 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LID  + +  +A +  +I AA  L+++ A  +D+   +S+       +  + KY+  K
Sbjct: 274 RKLIDFQMTREKLAKMRTEIEAARLLAYQAALYYDK-NHKSDPG-----LTAMAKYYTAK 327

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A   + EA++  GG G++   +I+R YR+     I  G+
Sbjct: 328 IAQKAVTEALQIFGGHGFVSS-AISRMYRDVRVLEIYEGT 366


>gi|190572315|ref|YP_001970160.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010237|emb|CAQ43845.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 387

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMDAGAKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G RS+ T EL F        N  G + G + V    ++ 
Sbjct: 187 TAFLVEKGMKGFSTSQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++      +  + M V +     Y   RH  G  +    +++  IAD+ + + A  A
Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D+ ++  ++AA A + A     W       +  +A++ +GG+GYI E    
Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 356 RLWRDAKLYEIGAGT 370


>gi|330941649|gb|EGH44428.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 600

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                    A V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     LN     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324

Query: 346 GGILID------QPV-------MKRAIADIALDIAAATALSFRLANSFDEAKS------R 386
            G L D      +PV       ++R +      +  A  L    +  FD+ ++      R
Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKTYVEGAFDLCLYASRLFDDTQTGESEDDR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N+I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|226952229|ref|ZP_03822693.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226837067|gb|EEH69450.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 375

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGHNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA HYA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATHYAKERLTFGKPIFEHQAIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M+  V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMSERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+++  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|262376461|ref|ZP_06069690.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308600|gb|EEY89734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 384

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 35/309 (11%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
           ++  +E GH      TSA+  +L+ T          I   E       P   T   IG  
Sbjct: 69  ILVAMELGH------TSAAFRSLIGTNNGIGSSGIIIDGTEEQKQKYLPRYATGEIIGSF 122

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA----QVEGRVGC 255
            LTE   G+D AA+ +   K  D  Y L+G K F++ +P +  F ++A    +++G  G 
Sbjct: 123 CLTEPDSGSDAAALKTSAVKDGD-YYILNGTKRFITNAPRATTFTVMARTNQEIKGASG- 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            +   L+E G+P GL   ++  K+G   + T ++ F N       L+G +    G    M
Sbjct: 181 -ISAFLVEAGTP-GLSLGKIDKKMGQHGSYTCDVIFDNCKVHKDQLIGGVE-GIGFKTAM 237

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + ++G  V +AE     A++YA  R   G  + +  +++  +AD   +I 
Sbjct: 238 RVL---DKGRLHIAGYSVGMAERMLEDALNYAVERKQFGQPIANFQLIQGMLADSKAEIY 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    A   D  ++ + EA+ A++ A        +M   V    ++  GG+GYI E
Sbjct: 295 AAKCMVLDAARLRDAGQNVTTEASCAKMFAT-------EMCGRVADRCLQIHGGAGYISE 347

Query: 428 RSIARHYRE 436
            SI R YR+
Sbjct: 348 YSIERFYRD 356


>gi|171057674|ref|YP_001790023.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775119|gb|ACB33258.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 597

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 55/330 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           TP + + +  K+ S E+  T             + LTE + G+D+  I S+ + + DG  
Sbjct: 146 TPELRERYLSKVVSGEWLAT-------------MNLTEPQAGSDLGLIRSKAEPL-DGTL 191

Query: 226 -----YCLSGHKWFLSSPMSD-----AFIMLAQVE----GRVGC--FLVPRLLEDGSPNG 269
                  +SG+K F+S    D       ++LA++     G  G    LVP+ L DG+ N 
Sbjct: 192 TSGSRVAVSGNKIFISGGDQDMTANIVHLVLARLPDAPAGTKGLSLILVPKFLPDGTRNA 251

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                +++K+G   ++T ++ F    G+LLG+       +  M     L  A+  ++ + 
Sbjct: 252 AWCDGIEHKMGIHGSSTSQMRFERATGWLLGEPGTGLAAMFLMMNSARLHVAMQGLAHLE 311

Query: 330 VSLAEAIHYARRR----------------HVSGG--ILIDQPVMKRAIADIALDIAAATA 371
            +  +A+ YA+ R                  SGG   ++  P M+R +  +      A  
Sbjct: 312 GATQKALAYAQERVQLRAPGRPADAMPSGGASGGPDPIVWHPAMRRILLTLQAQTEGARV 371

Query: 372 LSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L+  +    DE++   E A  AR      ++ P+ K +   +      +A+   GG GY+
Sbjct: 372 LAGWIGLLLDESEQHPEPAQRARAADLVALLTPVAKAFLTDLGHRGADDALGVFGGYGYV 431

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  I +  R+S    I  G+     +D++
Sbjct: 432 HEYGIEQQVRDSRIAMIYEGTNQIQAIDLV 461


>gi|121608205|ref|YP_996012.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552845|gb|ABM56994.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 598

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 149/374 (39%), Gaps = 64/374 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +   L    TP   K + PK+ S  +  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYACLHAHGTPEQKKIYLPKLTSGAWTGT-------------MCLTEAHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       ++LA++         +  F+ 
Sbjct: 175 DLGLLRTKAEPQADGSYKITGSKIFISAGEHDMAGNIVHLVLARLPDAPAGSKGISLFVC 234

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +   DGS    N +    L++K+G   NAT ++      G L+G  +          
Sbjct: 235 PKFIVHADGSLGERNAIDCAGLEHKMGIHGNATAQIMLDGASGSLVGQPHKGLA-----A 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYA------------RRRHVSGGILIDQPVMK 356
           + + +++A + V    + L E     A+ YA            R R +    +I  P ++
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKERLQMRSLAGPRARDLPADPIIVHPDVR 349

Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R      A A+    +++  AL         + K R   +    ++ PI K +       
Sbjct: 350 RMLLTAKAYAEGGRALSSYCALLLDKEQQHPDEKVRQASSEMLALLTPIVKAFITDNGYE 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465
                 +  GG GYI+E  + +H R++  N I  G+     LD+L     G N      F
Sbjct: 410 ATTLCQQVFGGHGYIKESGMEQHVRDARINMIYEGTNTIQALDLLGRKVLGNNGATLKKF 469

Query: 466 EQLFSTLEQDLGSS 479
            QL   L Q+ G++
Sbjct: 470 GQLLGQLAQEAGTN 483


>gi|254227625|ref|ZP_04921056.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|262395673|ref|YP_003287526.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151939667|gb|EDN58494.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|262339267|gb|ACY53061.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 384

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A+  G     V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGASGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP   E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
             + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|313111862|ref|ZP_07797654.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310884156|gb|EFQ42750.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 598

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 45/311 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  I ++    +DG + +SG K F+S+    MS+  + L         A  
Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDMSENIVHLVLAKLPDAPAGT 223

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+VP+ L D     G  N +    +++K+G +++AT  + F    G+L+G+ N 
Sbjct: 224 KG-ISLFIVPKFLPDAAGEAGVRNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------ 354
               +  M     L + +  +     S   A+ YAR R     ++G    D+P       
Sbjct: 283 GLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVH 342

Query: 355 --MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
             ++R +  +        AL++  A   D      +A  R   A     + PI K +  +
Sbjct: 343 PDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTE 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------L 457
               V    M+  GG GYI E  + +  R+     I  G+     LD+L          L
Sbjct: 403 TGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKL 462

Query: 458 LEKGTNLFEQL 468
           L   T L  QL
Sbjct: 463 LRGFTKLVHQL 473


>gi|302871966|ref|YP_003840602.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574825|gb|ADL42616.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 381

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 24/280 (8%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +   +D +++ A  +   G   +   + +    G    + ++K+G R+++T EL F +  
Sbjct: 158 NGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYCGKKEDKMGIRASSTTELIFEDCK 217

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                LLG     TG +  MK     D     V+ M V +A+     AI YA+ R   G 
Sbjct: 218 VPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKERVQFGQ 272

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCK 406
            L     ++  +AD+ ++I AA A+ +      D  AK  S+E++  ++ A         
Sbjct: 273 PLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS-------D 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 326 VAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|284048812|ref|YP_003399151.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953033|gb|ADB47836.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 383

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 20/270 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           AP+ + +     GLTE   GTD +A  +      D  Y L+G K F+++   +D +++ A
Sbjct: 112 APIAEGTHVGAFGLTEPSAGTDASAQQTTAVLKGDK-YILNGSKIFITNGKEADTYVVFA 170

Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             +   G   +   +LE G P G  + ++++K+G  ++ T EL F +     +   N+  
Sbjct: 171 MTDKSQGVHGISAFILEKGMP-GFRFGKIEDKMGGHTSITAELIFEDC---EVPKENLLG 226

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
              E  KI +  LD   + V+   + +AE     A+ Y++ R   G  +     ++  +A
Sbjct: 227 KEGEGFKIAMETLDGGRIGVAAQALGIAEGALAAAVKYSKEREQFGRSISKFQALQFMMA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L +  A   +E K  SE AA A+  A         +A  V  +A++  G
Sbjct: 287 DMATKIEAARYLVYHAAMLKNEGKPYSEAAAMAKCFA-------SDVAMEVTTDAVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY  +    R+ R +    I  G+   M
Sbjct: 340 GYGYTVDYPAERYMRNAKITQIYEGTNQVM 369


>gi|197103757|ref|YP_002129134.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477177|gb|ACG76705.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 395

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE  GG+D A++ +  +K+ DG Y L+G K W  +SP+SD  ++ A+++G++  FLV
Sbjct: 141 FGLTEPDGGSDPASMRTTARKV-DGGYVLNGAKMWITNSPISDVALVWAKLDGKIRGFLV 199

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R  E     G    ++KNK+  R++ T E+  S+ F     +L  +    GP       
Sbjct: 200 ERGTE-----GFETPQIKNKLSLRASVTGEIALSDAFVPEDMMLPGVEGLRGPFS----- 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   +A R +VS     G  L  + ++++ +AD+  +IA   
Sbjct: 250 -CLNKARYGIAWGAMGAAEFCLHASRDYVSSRSLFGRTLASRQLVQKKLADMQTEIALGF 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             +  L    D       E A+      + K   C  A  +   A +  GG+G   E  +
Sbjct: 309 EGALALGRLID-------EGAWVPEAISMLKRNNCGKALDIARVARDMHGGNGISGEYHV 361

Query: 431 ARH 433
            RH
Sbjct: 362 MRH 364


>gi|302130683|ref|ZP_07256673.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 592

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353
              +  M     L   I  ++    S   A+ Y            A+ +  +   +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++ A  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N    
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465

Query: 467 QLFS 470
           QLFS
Sbjct: 466 QLFS 469


>gi|311899801|dbj|BAJ32209.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 382

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A +T++ ++  DG + LSG K F+++   +D  ++ A+  G     V  F
Sbjct: 125 LTEPGTGSDAANLTTRAERDGDG-WLLSGTKMFITNGTWADVALVFARTGGPGHRGVTAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
           LVP         G   + +  K+G R  AT EL             G   G   V+   +
Sbjct: 184 LVPT-----DAPGFERRLVHGKLGLRGQATAELVLDRVRVPDGARLGAEGGGFAVAMAAL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              ++ +    A   V   + SL  A+ YA  R   G  +    +++  +ADIA+D+ AA
Sbjct: 239 AKGRMSV----AAGCVGIAQASLDAAVRYAGEREQFGKPIAAHQLVQELLADIAVDVDAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R+A+  D     + E++ A++ A      C          A++  GG G+I+E  
Sbjct: 295 RLLTWRVADLIDRGLPFAAESSVAKLFASEAAVRCAN-------NALQVFGGYGFIDEYP 347

Query: 430 IARHYRESPANSILLGS 446
           + ++ R++   ++  G+
Sbjct: 348 VGKYLRDARVMTLYEGT 364


>gi|110639765|ref|YP_679975.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282446|gb|ABG60632.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 351

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 142/298 (47%), Gaps = 35/298 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E       P+  T   IG   LTE   G+D   + +  ++  D  + L+G K F++ 
Sbjct: 73  FGNEEQKAKYLPLLATGKWIGAWALTEANTGSDSGNMKTVARQDGD-YWILNGSKNFITH 131

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +  S+  ++LA+  +     F    ++E G+  GL + R +NK+G R++ T EL   N  
Sbjct: 132 AKSSNVVVVLARHADSEDKKFSSAFIIEKGT-EGLTHGRKENKMGMRASETCELLLDNVR 190

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                LLG  N+  G  + MK+L   D   +S++ + + +A+     A+ Y++ R     
Sbjct: 191 VHKSQLLG--NIGDGFKQAMKVL---DGGRISIAALSLGIAQGAYEAALQYSKERQ---- 241

Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              +QP+     +   + D+A +I AA  L+++ A+   + +  + EAA A++ A     
Sbjct: 242 -QFNQPIGNFQGISFKLVDMATEIEAARLLTYKAADMKMKGQPMTREAAMAKLYAS---- 296

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              +++  V  EA++  GG GY ++  + + YR++   +I  G+     + +   L+K
Sbjct: 297 ---EVSVRVANEAVQIFGGYGYTKDYPVEKFYRDAKLCTIGEGTSEIQKIVIAKSLQK 351


>gi|325478441|gb|EGC81555.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 642

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K     G GLTE+  G+D     +  +   D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F N     +   N+    
Sbjct: 172 TTPGIGTHGISAFIVEKDFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + + +     A+ YA+ R   G  +         +AD+
Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  + +  A   +  +  S EAA A+ +A         +A  +  EA++  GGS
Sbjct: 289 ATHLHGARLMIYHAAELKENHERYSAEAAMAKQVA-------SDLAMKIATEAVQVYGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G+I+   + R +R++    I  G+   M
Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369


>gi|319792925|ref|YP_004154565.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315595388|gb|ADU36454.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 596

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 44/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + S+ +   DG Y + G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F+VP+ +  +DG+    N +    +++K+G +++ T  L++ +     G+L+G
Sbjct: 221 GVKGISLFVVPKFMVGKDGALGERNDVHCVSIEHKMGIKASPTAVLQYGDNGGAVGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348
             N     +E M   I ++SA  +V    +++AE     A+ YA+     R V G I   
Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSINAS 335

Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             +I  P +KR      A  +    +A+  A ++  A+   +A +R +  A+   M P+ 
Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|302387339|ref|YP_003823161.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1]
 gi|302197967|gb|ADL05538.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1]
          Length = 380

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 38/308 (12%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ SP+  S   + L  T    +++ P + S      NK         +   LTE   G+
Sbjct: 85  YVSSPNSLSGGPLLLSGTEEQKRNYLPSLIS-----GNKK--------LCFALTEPGAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED--GS 266
           D   + S   K  D  Y L+G K F++ +P++D  ++ A+ +   G   +   + D   +
Sbjct: 132 DAGGMQSTAVKDGDS-YILNGRKTFITMAPLADYAVIYAKTDMTKGTKGISAFIVDMKNT 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           P G+   + ++K+G    AT ++   N       LLG+  +  G +  MK L   D+  M
Sbjct: 191 P-GISCGKPEHKMGVIGCATSDIIMDNARIPAENLLGEEGM--GFINAMKTL---DTGRM 244

Query: 324 SVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            V+   + +A     EAI YA+ R   G  + D   +   IAD+A  + AA  L ++ A 
Sbjct: 245 GVAAQSIGVAQGALDEAIKYAKERKQFGKRIGDFQAIAFMIADMATKLEAAKQLVYKTAY 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  S EA+ A       KY+  ++   + ++A++  GG G+I++  I R YR+  
Sbjct: 305 LMDTHQPASMEASMA-------KYYASEVCNEIASKALQIHGGYGFIKDYKIERMYRDCR 357

Query: 439 ANSILLGS 446
             +I  G+
Sbjct: 358 VFTIYEGT 365


>gi|295085068|emb|CBK66591.1| Acyl-CoA dehydrogenases [Bacteroides xylanisolvens XB1A]
          Length = 568

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 50/374 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
            P  H  + P+I   E               + + LTE   G+D+ ++  +      DG 
Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +R++NK+G   +
Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339
            T EL + N    L GD  +  G ++   ++  ++ A + ++   V L++A +     YA
Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385
           + R   G  +I+ P +   +A +   + A  AL ++ +   D  K+              
Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375

Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           R E+  YA++     P+ K    + A     + ++  GGSG++ E +  R YR++   SI
Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435

Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
             G+     +  +  +  G+ +     FE +  + E + L S  KK+    + S +  KE
Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFKASTNAVKE 495

Query: 497 --DKGLARFLTEKI 508
             D+ L  F   K+
Sbjct: 496 VQDQELLDFTARKL 509


>gi|77461391|ref|YP_350898.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385394|gb|ABA76907.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 601

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G+ N +    +++K+G   NAT  + F    GFL+G  N     +    
Sbjct: 233 PKFLPNADGTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   +     + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + + +  A    M PI K +  ++        
Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|315925640|ref|ZP_07921850.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621181|gb|EFV01152.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 639

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 18/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +      D  Y L+G K F++ +P +D +++ A     +G   +
Sbjct: 123 FGLTEPNAGSDAGGTETTAVDKGDH-YLLNGGKVFITNAPKADTYVVFAVTTPDIGTHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +    +K+G RS++T EL F+N     +   N+     +  KI ++ 
Sbjct: 182 SAFIVEKGWAGFDFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGQEGDGFKIAMMT 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ YAR R   G  +  Q  +   IAD+A  +  A  L
Sbjct: 239 LDGGRIGIASQALGIAQGAYEAALAYARERVQFGKPIGFQQSISFKIADMATKLRMARFL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A      +  S EAA A       K +   MA  V+ +A++  GG+GY++   I R
Sbjct: 299 VYSAAELKTHHEPYSVEAAMA-------KGYASDMALEVVNDALQIFGGTGYLKGMDIER 351

Query: 433 HYRESPANSILLGSGNAM 450
            YR++   +I  G+   M
Sbjct: 352 MYRDAKITTIYEGTNEIM 369


>gi|269964390|ref|ZP_06178632.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269830887|gb|EEZ85104.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 384

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP   E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
             + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|311743087|ref|ZP_07716895.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313767|gb|EFQ83676.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 381

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 55/345 (15%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  F  V+ ++  K+ AA    +        +   +T+  +V L T  +  K W P + +
Sbjct: 67  DFRFNAVLAEELSKVSAALASCVG-------IHSDITAPYLVDLGTEEQ-KKRWLPGVAT 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             + + +G+TE  GG+D+AA+ +   +  D  + ++G K F+++  S
Sbjct: 119 GE-------------ILLAIGMTEPGGGSDLAALKTTAVRDGDQ-WVINGSKTFITNGFS 164

Query: 241 -DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
            D  +   +     G   +     + +  G    R  +K+G   + T EL F N     L
Sbjct: 165 ADLIVTAVRTSPEKGAKGITLFGIEATDEGFSRGRKLDKVGQTESDTAELFFENV---RL 221

Query: 300 GDLNVSTGPVEDMKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           GD  V  G V+  +  IY         L  AI +V+  +  LAE I Y + RH  G    
Sbjct: 222 GDDRV-LGEVD--RGFIYMMERLPQERLSCAISNVAHAKQILAETIQYTKDRHAFG---- 274

Query: 351 DQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            QP+      K  +A++   I AA A         D A           I A   K+W  
Sbjct: 275 -QPIGAFQHNKFLLAELVTKIEAAEAY-------VDAAVVAHTAGRLTAIDAAKVKWWSS 326

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +   V+   ++  GG G++ E  +AR +R++    I  GS   M
Sbjct: 327 DIQNDVLDHCVQLHGGYGFMNEYRVARAWRDARVTRIWAGSNEIM 371


>gi|228917950|ref|ZP_04081486.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228841747|gb|EEM86858.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 379

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|322807153|emb|CBZ04727.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 635

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + + S  G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 VTKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365


>gi|56419851|ref|YP_147169.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261419522|ref|YP_003253204.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297530508|ref|YP_003671783.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319766338|ref|YP_004131839.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56379693|dbj|BAD75601.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261375979|gb|ACX78722.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297253760|gb|ADI27206.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317111204|gb|ADU93696.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 381

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 43/303 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK  + E             +   + +TE   G+D+A I++   K 
Sbjct: 98  IASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAGSDLANISTTAVKD 144

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270
            D  Y ++G K F+++ +    I++A       C   P+           ++E  +P G 
Sbjct: 145 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPQAKPPHRGISLLVVERDTP-GF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  +  T EL F +       LLG+       + +      L  AI + + 
Sbjct: 196 TRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
             V  +    Y ++R   G  + +   ++  +A++A +IA       R+       K   
Sbjct: 256 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIV 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E + A       K+W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I  G+ 
Sbjct: 316 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 368

Query: 448 NAM 450
             M
Sbjct: 369 EMM 371


>gi|321265712|ref|XP_003197572.1| acyl-CoA oxidase [Cryptococcus gattii WM276]
 gi|317464052|gb|ADV25785.1| Acyl-CoA oxidase, putative [Cryptococcus gattii WM276]
          Length = 427

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 43/312 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           +++ L  +P + + W P +               T       L+E   G+D  A+ +  +
Sbjct: 142 TVIRLYGSPEIQQKWLPDL--------------ATCKVGSFCLSEPSAGSDAFALQTTAK 187

Query: 220 KISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
             S G  Y L+G K W  +S  ++ F++ A V+   G     CF++ + +      G+  
Sbjct: 188 LDSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGITCFIMSKDM------GVEI 241

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            + + K+G R+++T  L F +     +   N+     +  KI I  L+   + ++   + 
Sbjct: 242 AKKEAKLGIRASSTCLLNFDDV---KIPKENIVGEIGKGYKIAIEILNEGRIGIAAQMIG 298

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+     ++ YA +R   G  + +   M    A++A +I AA  L++  A   +E +  
Sbjct: 299 LAQGAFDKSLEYAYQRKQFGKPVGEFQGMGFQFAEVATEIEAARLLTYNAARLKEEGRPF 358

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++EAA A       KY+   +A      A+E  GG G++ E  + +++R+S   +I  G+
Sbjct: 359 TKEAAMA-------KYYASVIAQKAAGSAIEWAGGQGFVREVGLEKYWRDSKIGAIYEGT 411

Query: 447 GNAMVLDVLNLL 458
            N  +  +   L
Sbjct: 412 NNIQLDTIAKFL 423


>gi|300693600|ref|YP_003749573.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299075637|emb|CBJ34934.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 385

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           I   LTE   G+D A++ ++     D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPNAGSDAASLQTRATLDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISAFIVP-----ADTPGIALGKPDRKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYAKERRQFGQPIADFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK   ++     ++A  TK +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGKQDHEVSMLASCTKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           + E  + R YR+
Sbjct: 349 VAEYKVERFYRD 360


>gi|281347553|gb|EFB23137.1| hypothetical protein PANDA_018993 [Ailuropoda melanoleuca]
          Length = 396

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 137 FALSEPGNGSDAGATSTTARAEGDS-WVLNGTKAWITNSWEASAAVVFASTDRSLQNKGI 195

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R+++T  L F +       LLG+      P  
Sbjct: 196 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 244

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL
Sbjct: 245 GFKIAMQTLDMGRIGIASQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 304

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + ++  L++R A   D  K  ++EAA A++ A        + A AV  +A++ +GG GY
Sbjct: 305 ALESSRLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGY 357

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 358 VTEMPAERHYRDARITEIYEGT 379


>gi|90411314|ref|ZP_01219326.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
 gi|90327843|gb|EAS44174.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
          Length = 396

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 27/282 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-----------QV 249
           LTE   G+D AA+T+  +K+  G Y L+G K F+S +  +D  +++A           + 
Sbjct: 124 LTEPNAGSDAAALTTSAKKVK-GQYILNGAKTFISGAGETDVLVVMARTVNEDQGSNKKA 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           E + G   +   +      G+ Y R + K+G  S  T  + F N       LLG      
Sbjct: 183 EHKSGAKGISAFIVPVDATGITYGRKEPKMGWNSQPTRSITFDNVAIPARNLLG--QEGE 240

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L +A  Y   R   G  L     ++  +AD+A 
Sbjct: 241 GFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGKSLAQFQGLQFKLADMAT 300

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L    A+  D  +   E  AY      + K +   +   V  +A++  GG GY
Sbjct: 301 ELVAARQLVRYAASKLD--RQDPEATAYC----AMAKRFATDIGFTVCDQALQLYGGYGY 354

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
           I+E  + R++R+   + IL G+   M L +   LL +GT + 
Sbjct: 355 IKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396


>gi|46199854|ref|YP_005521.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|46197481|gb|AAS81894.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
          Length = 372

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 27/254 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D  ++ ++ +++  G + L+G K W  S+  +  ++++A+ E  +  FLV  
Sbjct: 123 LTEPQAGSDAKSLRAEARRVKGG-FVLNGVKSWITSAGHAHLYVVMARTEKGISAFLV-- 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
             E G+P GL + R + K+G  +  T E+     F     LLG+             L  
Sbjct: 180 --EKGTP-GLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGWGLAYA-----LAG 231

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + V+   V +A      A  YA  R   G  L +   +   IAD+ + IAAA AL
Sbjct: 232 LDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARAL 291

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D  +  + EA+ A++            A  V  EA++ +GG GY  +  + R
Sbjct: 292 VLEAARKKDRGERFTLEASAAKLF-------ASAAAVEVTREAVQVLGGYGYHRDYRVER 344

Query: 433 HYRESPANSILLGS 446
           +YR++    I  G+
Sbjct: 345 YYRDAKVTEIYEGT 358


>gi|71065525|ref|YP_264252.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038510|gb|AAZ18818.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 597

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 141/330 (42%), Gaps = 49/330 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y ++G K F+S+   D       I LA++ G     
Sbjct: 164 LTEAHAGSDLGIIRTKAEPNTDGSYSITGQKIFISAGEHDLTDNIIHICLARLPGAPAGT 223

Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+++  ED   G  N +    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 224 KGISLFIVPKIMVNEDNSLGEKNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQP 353
              +     +  + +A+  ++    +   ++ YA+     R +SG          +I  P
Sbjct: 284 LQCMFTFMNVARIGTAVQGLTAAEYAFQGSLMYAKDRLAMRSLSGAKAPEKAADPIIVHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKMA 408
            ++  +           AL + L++  D  AK   +E  +A     ++ PI K +  +  
Sbjct: 344 AVRNMLLTEKAFAEGGRALVYYLSHFADTVAKGEGDELKFADQMLSLLTPIAKAFLTETG 403

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                  ++  GG G+I E  + ++ R++    +  G+     LD+L             
Sbjct: 404 LEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLG------------ 451

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDK 498
                + LGS GK +   ++   + C ++K
Sbjct: 452 ----RKVLGSQGKLLTNFVKIIQAFCDDNK 477


>gi|85705433|ref|ZP_01036531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669858|gb|EAQ24721.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 391

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 18/280 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG---RVGC 255
             +TE   G+D   + ++   + DG + LSG KWF++S   SD  I+ A V+    +   
Sbjct: 122 FAITEADAGSDPRRVKTKA-VMRDGQWYLSGEKWFVTSYNASDFIIVHAHVDDDPDKPTL 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV     D     + + R    + N +    EL F  T       LG++       +D 
Sbjct: 181 FLV-----DKPVLNMTHVRSPKFMHNFAFDHAELIFDETPVAADRQLGEIGQGFELTKDW 235

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            +   L  A  S+     +   A  +A  RH     + D   ++  +AD+A+DI AA ++
Sbjct: 236 FVEARLQIAAHSIGAATRAAEIANEFATSRHQFDRAIRDFQGIEFMLADMAVDIFAAKSM 295

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R+A   D    RS   A+A  +    K +C + +  VI +A++ +GG GY+ E    R
Sbjct: 296 LYRVAAEIDAGADRSRVHAHASAL----KLFCSEASGRVIDKAVQILGGRGYMRENPAER 351

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFST 471
            YR+   + I  G+       V   + K G  ++ + F T
Sbjct: 352 LYRDIRVDRIWEGTSEIQRSVVGGRIRKHGMRIYSEAFET 391


>gi|115525226|ref|YP_782137.1| butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
 gi|115519173|gb|ABJ07157.1| Butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
          Length = 378

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR-VGCFLV 258
           +TE   G+D+  I +   K+ DG Y L G K W  S+P++D F + A+  E R +  FLV
Sbjct: 125 MTEPDAGSDLGGIATTATKV-DGGYRLKGQKIWVTSAPVADFFTVFARAGEARKLTIFLV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R  E     GL   +   K+G  +  T EL   + F     +L    V  G     K+L
Sbjct: 184 ERHFE-----GLIVGKAIPKMGVWALPTSELALDDCFVPDSHML-SREVGDGEAHLRKLL 237

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             + + +  +++ G R +L EAI YA  R   G  +     ++  +A++A D+ AA  L 
Sbjct: 238 AEVRIVTGALALGGARGALDEAIRYAAERKQFGKPINAYQAVQIKLAEMATDLEAARRLV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A   D  K    EAA A++ A       C  A  ++A         GY  E  + RH
Sbjct: 298 HYAAWLKDSGKPHHREAAMAKLFASEAAAQICDKAARILAS-------YGYSMEFPVQRH 350

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
            R+      L+G G +   D+L L+
Sbjct: 351 LRD--IRFTLIGGGTS---DILKLI 370


>gi|226944607|ref|YP_002799680.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226719534|gb|ACO78705.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 591

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 46/316 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P+++S E+  T             + LTE   G+D+  + ++ +  +DG Y +SG K 
Sbjct: 151 YLPRLYSGEWAGT-------------MCLTEAHAGSDLGLLRTRAEPRADGSYAISGGKI 197

Query: 234 FLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRLKN 277
           F++    D       ++LA++         +  FLVP+ L     E G+ N L    L++
Sbjct: 198 FITGGEQDLTANILHLVLARLPDAPAGSKGISLFLVPKFLVAPNGELGARNALSCGSLEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G+ +     +  M     L   I  +     S   A  
Sbjct: 258 KMGIKASATCVMNFDGATGYLIGEPHKGLAAMFTMMNYERLSIGIQGIGCAEASYQNARA 317

Query: 338 YARRR---HVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384
           YAR R      GG          ++  P ++R +  +        A S  +A   D AK 
Sbjct: 318 YARERLQGRAPGGARAPQKSADPIVAHPDVRRMLLTMKALTEGGRAFSTYVAQQLDLAKY 377

Query: 385 ----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                R    A   ++ PI K +             +  GG GYI E    +  R+    
Sbjct: 378 SEDDERRHAEALVALLTPIAKAFFTDTGLESCIHGQQVFGGHGYIREWGQEQLVRDVRIA 437

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+     LD+L 
Sbjct: 438 QIYEGTNGIQALDLLG 453


>gi|116624770|ref|YP_826926.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116227932|gb|ABJ86641.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 599

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 37/318 (11%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGT 209
           L S SV  ++ V + T P V   W    +          P   T   IG   L+E    +
Sbjct: 109 LASFSVAFSAHVGIGTLPIV---W----YGTAAQKQKYLPKLATGEWIGAYALSESSSAS 161

Query: 210 DIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           D     ++    +DG  Y L+G K W  +S  +D F + A+V+G +   FL+ R    G+
Sbjct: 162 DAMNCRTRAVLSADGTHYVLNGEKMWITNSGFADLFTVFAKVDGEKFSAFLIER----GT 217

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           P G      ++K+G R ++T  L  ++       LLG++        ++  +        
Sbjct: 218 P-GFAVGAEEHKLGIRGSSTCPLILADCQVPVENLLGEIGKGHHIAFNILNIGRFKLGAA 276

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            V G R  L +AI YA+ R   G  + +  +++  +A+ A  I A  A+ +R     D  
Sbjct: 277 CVGGARNGLQDAIGYAKERKAFGKSISEFGLIQEKLAESAAGIYAGEAMVYRAIGMIDAA 336

Query: 382 -------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                        E + R EE A   +   I K W  +M   V+   ++   G GY+EE 
Sbjct: 337 LADVDTKAEGASREIQKRIEEYA---VECSILKVWASEMLDMVVDHVVQIYAGYGYVEEY 393

Query: 429 SIARHYRESPANSILLGS 446
              R YR+S  N I  G+
Sbjct: 394 PAERAYRDSRINRIFEGT 411


>gi|326476534|gb|EGE00544.1| glutaryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 432

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 170 FGLTEPNHGSDPGSMETVARPHPTKKGFYALSGTKTWITNSPISDAFLVWAKLDGKIRGF 229

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           ++ R   D  P G L    +KNK   R++ T  ++  N       +  ++    GP    
Sbjct: 230 VLER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 282

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D 
Sbjct: 283 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 340

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T  + ++A   DE K+  E       M  + K   C  A A      E  GG+   +
Sbjct: 341 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 393

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 394 EYHIGRH 400


>gi|260910060|ref|ZP_05916742.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635828|gb|EEX53836.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 569

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 32/328 (9%)

Query: 198 IGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ +A+        DG + ++G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSAMLKATYSEKDGCWLINGVKRFITNGDSDIHLVLARSEAGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + +    L G+  +  G ++ +  L
Sbjct: 231 RGLSMFIYDKRQGGVTVRHIENKLGIHGSPTCELVYKDAKAELCGETRL--GLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E ++YAR R      +ID P +   ++ +   + A  ++
Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEGLNYARERRQFETNIIDFPAVYDMLSRMKAKLDAGRSI 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D  K+              R+E+  Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDIYKALDDIARERKLTPEERAEQKKYMRLADAFTPLAKGMNSEYANQNAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ++  GGSG+I E    R YR++   SI  G+    V+  +  +  GT L   +   LE+D
Sbjct: 409 IQIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL-GIMKEMLEED 467

Query: 476 LGSSGK-------KVITILRDSISLCKE 496
           +  S K       K++    +S++  KE
Sbjct: 468 VADSLKSLKERVAKLVERYEESVNNVKE 495


>gi|169796342|ref|YP_001714135.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156922|ref|YP_002318967.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483803|ref|YP_002326028.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|301346103|ref|ZP_07226844.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB056]
 gi|301511201|ref|ZP_07236438.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB058]
 gi|301595047|ref|ZP_07240055.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB059]
 gi|332852002|ref|ZP_08433869.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871754|ref|ZP_08440194.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149269|emb|CAM87152.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056082|gb|ACJ40984.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987087|gb|ACJ57386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332729579|gb|EGJ60917.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731224|gb|EGJ62522.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 600

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 153/358 (42%), Gaps = 49/358 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC 255
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++ +  VG 
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPVGT 225

Query: 256 -----FLVPRL-------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                F+VP+        LED   N +    +++K+G   NAT  L F    G+L+G  N
Sbjct: 226 KGISLFIVPKFNVDDEGNLED--RNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPEN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ------- 352
                +        + +A+  ++   +S   A+ YA+     R +SG    D+       
Sbjct: 284 RGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIV 343

Query: 353 -PVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCC 405
            P ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  
Sbjct: 344 HPAVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------N 456
           +         ++  GG G+I E  + +  R++  +++  G+     LD+L          
Sbjct: 404 ESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGK 463

Query: 457 LLEKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           LL+  T+L +Q  S  + +  L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 464 LLKNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEEAKHNPEEIGAAS 521


>gi|194214228|ref|XP_001914880.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Equus caballus]
          Length = 408

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 148 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNSWEASATVVFASTDRSLQNKGI 206

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 207 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGFK 258

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL + 
Sbjct: 259 IAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALALE 318

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++EAA A++ A        + A A+  +A++ +GG GY+ E
Sbjct: 319 SARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 371

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               RHYR++    I  G+     L +   L K
Sbjct: 372 MPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 404


>gi|15599394|ref|NP_252888.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9950410|gb|AAG07586.1|AE004836_5 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 593

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|121604132|ref|YP_981461.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593101|gb|ABM36540.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 596

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 138/286 (48%), Gaps = 44/286 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+AA+ S+ +  +DG Y + G K F++    D       ++LA+  G   
Sbjct: 161 MNLTEPQAGSDLAAVRSRAEPQADGSYKVFGTKIFITYGEHDMAENIVHLVLARASGAPE 220

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L +     G  N +    +++K+G +++ T  L+F +     G+L+G
Sbjct: 221 GVKGISLFVVPKFLVNADGTLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAAGYLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILID 351
           + N     +E M   I ++SA  +V    +++AE     A+ +A+     R V G I   
Sbjct: 281 EENRG---LEYM--FIMMNSARYAVGVQGIAIAERAYQKAVGFAKDRVQSRPVDGSIKAS 335

Query: 352 QPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            P++            RA  +    +A+  A ++   +   +A+ R +  A+   M P+ 
Sbjct: 336 APIIHHPDVRRMLMTMRAYTEGCRAMASVAAAAYDATHHHPDAEVRKQSLAFYEFMVPLV 395

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K +  +M+  V +  ++  GG G+IEE   A+++R++   +I  G+
Sbjct: 396 KGYSTEMSQEVTSLGVQVHGGMGFIEETGAAQYFRDARILTIYEGT 441


>gi|330900801|gb|EGH32220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 491

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLRGNKIFISCGDHSLSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                    A V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     LN     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N+I  G+
Sbjct: 385 RHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|229079713|ref|ZP_04212246.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228703553|gb|EEL56006.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 371

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 160

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 161 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 269

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359


>gi|257065599|ref|YP_003151855.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256797479|gb|ACV28134.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 642

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 18/268 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K     G GLTE+  G+D     +  +   D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F N     +   N+    
Sbjct: 172 TTPGIGTHGISAFIVEKDFEGFTFSDHYDKLGIRSSSTAELHFENV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + + +     A+ YA+ R   G  +         +AD+
Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  + ++ A   +  +  S EAA A+ +A         +A  +  EA++  GGS
Sbjct: 289 ATQLHGARLMIYQAAELKENHERYSAEAAMAKQVA-------SDLAMKISTEAVQIYGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G+I+   + R +R++    I  G+   M
Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369


>gi|77735757|ref|NP_001029573.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
 gi|122144069|sp|Q3ZBF6|ACADS_BOVIN RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|73587179|gb|AAI03366.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Bos taurus]
          Length = 412

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 33/250 (13%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + LSG K W  ++  + A ++ A  +       +  FLVP         GL   + ++K+
Sbjct: 177 WVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPM-----PTPGLTLGKKEDKL 231

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           G R+++T  L F +       LLG+      P    KI +  LD+  + ++   + +A+A
Sbjct: 232 GIRASSTANLIFEDRRIPKDSLLGE------PGLGFKIAMQTLDTGRIGIASQALGIAQA 285

Query: 336 -----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                + YA  R   G  L     ++  +AD+AL + +A  L++R A   D  K  ++EA
Sbjct: 286 ALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEA 345

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A++ A        + A A+  +AM+ +GG GY++E    RHYR++    I  G+    
Sbjct: 346 AMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQ 398

Query: 451 VLDVLNLLEK 460
            L V   L K
Sbjct: 399 RLVVAGHLLK 408


>gi|296387250|ref|ZP_06876749.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 593

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVASDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|47569766|ref|ZP_00240438.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|206975851|ref|ZP_03236762.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217962830|ref|YP_002341408.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|222098813|ref|YP_002532871.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228988568|ref|ZP_04148655.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229142084|ref|ZP_04270609.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|47553562|gb|EAL11941.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|206745945|gb|EDZ57341.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217064522|gb|ACJ78772.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|221242872|gb|ACM15582.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228641373|gb|EEK97679.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228771185|gb|EEM19664.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|324329291|gb|ADY24551.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|256544645|ref|ZP_05472017.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
 gi|256399534|gb|EEU13139.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
          Length = 643

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 18/269 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE+  G+D     +  +   DG  Y L+G K F++ +P +D +++ A
Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAELDLDGKRYILNGKKIFITNAPKADTYVVFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +G   +   + +    G       +K+G RS+ T EL F N     +   N+   
Sbjct: 173 VTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGIRSSCTAELHFDNV---KVPKENLLGK 229

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++   + + +     A+ YA+ R   G  +         +AD
Sbjct: 230 EGQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGMPIAHLQANTFKLAD 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A ++ AA  + +  A   +  +  S +AA A       K +   +A  +  EA++  GG
Sbjct: 290 MATNLKAARLMIYSAAELKENHERYSADAAMA-------KQFASDLASKITNEALQLYGG 342

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
           SG+I+   + R YR+S    I  G+   M
Sbjct: 343 SGFIKGIDVERFYRDSKITQIYEGTNEIM 371


>gi|239503645|ref|ZP_04662955.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 600

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A++YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALNYAKERLAMRSLSGPKYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q  S  + +  L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521


>gi|229076555|ref|ZP_04209515.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|229118836|ref|ZP_04248185.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228664637|gb|EEL20130.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228706588|gb|EEL58801.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|170723991|ref|YP_001751679.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169761994|gb|ACA75310.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 601

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYRISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  NG+    +++K+G   NAT  + F +  G+L+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVTCGSIEHKMGIHGNATCVMNFDSATGYLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+    + YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D      + + R +  A    + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|94984843|ref|YP_604207.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555124|gb|ABF45038.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P+ +        L+E   G+D AA+++    + DG  + ++G K W  +  ++D  ++ A
Sbjct: 113 PLTEKPALAAFALSEPNNGSDAAAMSTTA--VLDGDEWVINGTKMWISNGGVADITVVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300
               + G      L+      G  + ++K+K+G R++ T EL F N         G +  
Sbjct: 171 TTNRQGGHRATVALVVPKDAPGFSFNKIKHKMGQRASLTSELVFENVRVPKENQLGGVGD 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++   ++  +I +    A  SV   R +L E++ YA++R   G  +     ++  +A
Sbjct: 231 GFKIAMKTLDKTRIPV----AAGSVGVARRALEESLKYAKQREAFGQPIAQFQAIQFKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+ I     ++++ A   D+      E+A       I K +C +MA     EA++  G
Sbjct: 287 EMAMGIETGRLMTWKAAWLVDQGLPHGYESA-------IAKAYCSEMAFDAANEAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ E  + +  R+   N I  G+
Sbjct: 340 GYGYVGEYPVEKLLRDVKLNQIYEGT 365


>gi|251779239|ref|ZP_04822159.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083554|gb|EES49444.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 636

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   G+D     ++   + DG  Y L+G K F+++   +D +++ A
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+   
Sbjct: 171 VTTPDIGVRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q V+   +AD
Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L +  A   +  +S S EAA A       K +   +   V+ ++++  GG
Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDSLQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365


>gi|212696807|ref|ZP_03304935.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325847079|ref|ZP_08169905.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212676097|gb|EEB35704.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481051|gb|EGC84096.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 643

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 18/269 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE+  G+D     +  +   DG  Y L+G K F++ +P +D +++ A
Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAELDLDGERYILNGKKIFITNAPKADTYVVFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +G   +   + +    G       +K+G RS+ T EL F N     +   N+   
Sbjct: 173 VTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGIRSSCTAELHFDNV---KVPKENLLGK 229

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +         +AD
Sbjct: 230 EGQGFKIAMATLDGGRIGIASQALGIAQGAYESALSYAKEREQFGMPIAHLQANTFKLAD 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  + +  A   +  +  S +AA A       K +   +A  +  EA++  GG
Sbjct: 290 MATYLKAARLMIYSAAEMKENHERYSADAAMA-------KQFASDLASKITNEALQMYGG 342

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
           SG+I+   + R YR+S    I  G+   M
Sbjct: 343 SGFIKGIDVERFYRDSKITQIYEGTNEIM 371


>gi|299069056|emb|CBJ40307.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 392

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252
           I   LTE   G+D AA+ ++     D  Y ++G K F++ +P + AF ++A+      G 
Sbjct: 120 ISFALTEPNAGSDAAALQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGAEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISAFIVP-----ADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YAR R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYARERRQFGQPIADFQLIQAMLADSQT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A+ +D AK   +      ++A   K +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCAHRYD-AKPAGKPDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           + E  + R YR+
Sbjct: 349 VAEYKVERFYRD 360


>gi|254483196|ref|ZP_05096429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036567|gb|EEB77241.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 383

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 36/335 (10%)

Query: 142 LMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L+AQ E G     SV  S ++   M TP +      +  S E       P     +   +
Sbjct: 69  LVAQEEWGSASHGSVPLSIAVQTDMATPAL-----ARFGSDELKRNFLTPAIAGDMVTSI 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRVG 254
           G++E   G+D+AAI +   K  D  Y ++G K W  +S  +D   +LA     Q      
Sbjct: 124 GVSEPHAGSDVAAIKTTAIKRGDD-YVINGTKMWITNSTQADYICLLANTSDDQKHVNKS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
             +VP  +      G     L NK+G R++ T +L F +      +L+G+     G    
Sbjct: 183 LIIVPTDVP-----GFSTSSLLNKLGMRASDTAQLFFDDVVVPQRYLIGE----EGKGFT 233

Query: 312 MKILIYLDSAI----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +++ + +  I    +++ G+   + E I Y  +R   G  L++  ++   +A++ ++I 
Sbjct: 234 YQMMQFQEERIAGSAITIKGLENCINETIEYTSQRQAFGKPLLNNQIVNMKLAEMQMEIE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  AL++R   ++      +  A+YA++ A        K+  ++  E ++  GG GY+ +
Sbjct: 294 SLRALTYRACETYINGGDPTLLASYAKLKA-------GKLCNSIPTECLQFWGGMGYMWD 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             + R  R+    SI  G+   M+  +  ++  GT
Sbjct: 347 NPVGRAMRDMRLTSIGGGADEVMLGIIGKMMGLGT 381


>gi|228930350|ref|ZP_04093354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228829336|gb|EEM74969.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|196043351|ref|ZP_03110589.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|196025660|gb|EDX64329.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
          Length = 381

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|114706901|ref|ZP_01439801.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
 gi|114537849|gb|EAU40973.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
          Length = 604

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 176/433 (40%), Gaps = 79/433 (18%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  + P++T  ++ AL      H+  +  + SR  D         T     + LTE + G
Sbjct: 120 GFAIGPTLTVGAIEAL------HQHGSEDLRSRYLDKLVSGEWTGT-----MNLTEPQAG 168

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           +D++ I ++ +   DG Y + G K +++    D       ++LA++ G       +  FL
Sbjct: 169 SDLSGIKTRAEPAGDGTYRIFGQKIYITYGEQDFTDNIVHLVLARLPGAPEGVKGISLFL 228

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---------TFGFLLGDLN 303
           VP+ L +     G+ N +    L+ K+G   + T  + + +           G+L+G+ N
Sbjct: 229 VPKFLVNDDLSLGARNDVFCAALEKKLGIHGSPTCTMIYGDDKGETGEPGAIGWLIGEEN 288

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------VSGGI--------L 349
                +  M     L  AI  V     +  +A+ +AR R       ++ G         +
Sbjct: 289 RGLACMFTMMNNARLLVAIQGVGIAEAATQKALEFARDRRQGRSTRLAKGAEPKGQMAPI 348

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYAR-------IMAPIT 400
           +D P + R +  +     AA A+S+   ++ D AK  +R+ +   A+       ++ P+ 
Sbjct: 349 VDHPDVTRMLLTMKALTGAARAISYACGHAGDMAKHHARAGDGDAAKSWKDRVDLLTPVA 408

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K +   +   V    ++  GG GY+EE   A+  R++    I  G+     +D++     
Sbjct: 409 KAFSTDVGVEVAGLGVQVHGGMGYVEETGAAKLLRDARIAPIYEGTNGIQAIDLVTRKIG 468

Query: 458 LEKG---TNLFEQLFSTLEQ-------DLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           L  G   TN   +L S LE        D G S   +   LR       E +   RFL+E 
Sbjct: 469 LSGGGAVTNYILELRSVLETLEARNLPDFGRSASMIDAALR-------ELEASTRFLSEA 521

Query: 508 IALASSAAALYRA 520
           IA      AL  A
Sbjct: 522 IARGERETALAGA 534


>gi|229017861|ref|ZP_04174744.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229024064|ref|ZP_04180538.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228737242|gb|EEL87763.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228743452|gb|EEL93569.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 381

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           + G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGVEDNGRKRISAFIVPTTSE-----GLTITSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|195054501|ref|XP_001994163.1| GH16400 [Drosophila grimshawi]
 gi|193896033|gb|EDV94899.1| GH16400 [Drosophila grimshawi]
          Length = 406

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++   +  D  Y L+G K W  ++  ++A I+ A    +     +
Sbjct: 146 FALSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNAFEAEASIVFATTNKQLKHKGI 204

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+VP+ ++     G    + ++K+G R ++T +L F +       LLG   +      
Sbjct: 205 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKESLLGTAGLG----- 254

Query: 311 DMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD+  + ++G  + +A+A     + YA++R   G  +     +++ IAD++L
Sbjct: 255 -FKIAMKTLDAGRIGIAGQALGIAQASLEVAVDYAQKRQSFGKPISKLQAIQQKIADMSL 313

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D+  S ++EAA A++ A      C         + ++ +GG GY
Sbjct: 314 AVESARLLTWRAAWLKDQKMSYTKEAAMAKLAASEAATLCAH-------QCIQILGGMGY 366

Query: 425 IEERSIARHYRESPANSILLGS 446
           + + S  RHYR++    I  G+
Sbjct: 367 VTDMSAERHYRDARITEIYEGT 388


>gi|187934827|ref|YP_001886181.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187722980|gb|ACD24201.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +K  D  Y L+G K F+++ P+S+ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    ++++K G +S    EL F N       L+G      G    MK+L
Sbjct: 182 SAFIVEKEFEGFSIGKIEDKCGIKSAQVSELIFENCKVPAENLVGAEGKGFGIA--MKVL 239

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D   + V+   + +AE     A  Y + R   G  L     +   +A++ L+I  A 
Sbjct: 240 ---DGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAK 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + ++ A    E +  S  AA A++        C  +A  V  EA++ +GG+GY++E ++
Sbjct: 297 YILYKAAMDKQEGRQYSVSAAKAKLS-------CTDVAMKVTVEAVQMLGGNGYMKEYNV 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 350 ERMMRDAKITQIYEGT 365


>gi|325271494|ref|ZP_08138012.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103384|gb|EGC00713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 601

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMAENIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  NG+    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+    + YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D      + + R +  A    + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|311104902|ref|YP_003977755.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759591|gb|ADP15040.1| acyl-CoA dehydrogenase, N-terminal domain protein 5 [Achromobacter
           xylosoxidans A8]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 13/264 (4%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           M +  +   + +TE   G+D+ AI +   K   G Y ++G K F+++   +D  +++A+ 
Sbjct: 117 MAQGDIVASIAMTEPGAGSDVKAIRTAAAKAQGG-YVINGQKTFITNGFHADRVLVVAKT 175

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +   G   +     D +  G    RL +K+G ++  T EL F + F     +LG+     
Sbjct: 176 DPAAGARGISLFWVDAATPGFTRGRLLDKVGQKAQDTAELFFQDMFVPDEDMLGEPGQGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G +    +   L  A+     +  +L   + Y + R      LID   ++  +ADI    
Sbjct: 236 GYLMKELVRERLMIAVRCAMALESALQWTVDYTKDRRAFDKALIDNQHIRFKLADIKTLA 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  A        + + +  +  AA A++       W  + A + I + ++  GG GY+ 
Sbjct: 296 AATRAFVDGCVQQYLDGELDAGGAAMAKL-------WASE-ATSAIDDLLQFHGGYGYMR 347

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR Y +   N I  G+   M
Sbjct: 348 EYPIARAYTDVRPNRIYGGASEVM 371


>gi|229099774|ref|ZP_04230699.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228683663|gb|EEL37616.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|149918910|ref|ZP_01907396.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149820284|gb|EDM79701.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 374

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 27/314 (8%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK---APMQKTSVAIGLGLTEKRG 207
           L+S  +T A    L+     H    P I +   +   +    P+      I L +TE  G
Sbjct: 61  LVSEELTRAGSGGLIAGLMSHGIGLPPIIALGSEALKERIAPPVIAGEAIIALAVTEPSG 120

Query: 208 GTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           G+D+A I ++ +K+ +G    Y + G K F++S +   ++  A   G  G   V  L   
Sbjct: 121 GSDVANIQTKARKVGEGDEARYIVDGAKTFITSGVRADWLTTAVRTGGEGMGGVSLLAIP 180

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G   G+    L +K+G   + T  + F N       L+G  N        M I++  ++ 
Sbjct: 181 GDAEGVSRAPL-DKMGWHCSDTAAIYFDNVEVPASNLIGFENAGF-----MGIMVNFNNE 234

Query: 322 IMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            M ++ M     R+   EA  +A++R   G  L+   V++  + D+A  I A   +   L
Sbjct: 235 RMMLAAMALGFARLCFEEAADWAQQRETFGKPLVRHQVVRHKLVDMATSIRAVECVLDDL 294

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +    E   A+ +A      C K       EA++ +GG+GYI      R YRE
Sbjct: 295 AWRIDRGEQPIAEVCMAKNLATQCVELCAK-------EAVQILGGAGYIVGTHCERIYRE 347

Query: 437 SPANSILLGSGNAM 450
           +   SI  G+   M
Sbjct: 348 TKVLSIGGGAEEIM 361


>gi|152985377|ref|YP_001346004.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960535|gb|ABR82560.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 592

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 KGISLFLVPKVLVNADGSLGERNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  ++    S   AI YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R        ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG G+I E    +  R+     I  G+     LD++ 
Sbjct: 406 GLETTLHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454


>gi|228936626|ref|ZP_04099420.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229199466|ref|ZP_04326129.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228584042|gb|EEK42197.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228823061|gb|EEM68899.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|188587652|ref|YP_001921196.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|188497933|gb|ACD51069.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +K  D  Y L+G K F+++ P+S+ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +++NK G +S    EL F N     +   N+     +   I +  
Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENC---KVPAENLVGAEGKGFGIAMKA 238

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AE        Y + R   G  L     +   +A++ L+I  A  +
Sbjct: 239 LDGGRIGVAAQGLGIAEGAFDIVKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAKYI 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E ++ S  AA A++        C  +A  V  EA++ +GG+GY++E ++ R
Sbjct: 299 LYKAAMDKQEGRTYSVSAAKAKLS-------CTDVAMKVTVEAVQMLGGNGYMKEYNVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKITQIYEGT 365


>gi|194363976|ref|YP_002026586.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346780|gb|ACF49903.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 387

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMAAGAKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G RS+ T EL F        N  G + G + V    ++ 
Sbjct: 187 TAFLVEKGMKGFSTAQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++      +  + M V +     Y   RH  G  +    +++  IAD+ + + A  A
Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D+ ++  ++AA A + A     W       +  +A++ +GG+GYI E    
Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 356 RLWRDAKLYEIGAGT 370


>gi|1168286|sp|P15651|ACADS_RAT RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
          Length = 412

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  ++  D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA  RH  G  L     ++  +AD+AL + 
Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++E+A A++ A        + A A+  +A++ +GG GY+ E
Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 375

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 376 MPAERYYRDARITEIYEGT 394


>gi|254255643|ref|ZP_04948959.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124901380|gb|EAY72130.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 596

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++    D       ++LA+     EG  G   F+V
Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357
            M I++      + + G+ V+     +A  +A+ R  S  +         +I  P ++R 
Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                A+ + A  +A   A    +A+   +  +R+   A    + PI K W  +M   V 
Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHADDATRAHHQAIYEYLVPIVKGWSTEMVNDVA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|330951405|gb|EGH51665.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 600

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     LN     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N+I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|323490854|ref|ZP_08096052.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus
           donghaensis MPA1U2]
 gi|323395462|gb|EGA88310.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus
           donghaensis MPA1U2]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 34/286 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM + +     GLTE   G+D  A+ +  ++  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGTKIGAYGLTEPASGSDAGAMRTSAKEDGDH-YVLNGSKIFITNGGIADIYIVFAV 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
            +          F++ +  E     G    + + K+G RS+ T E+ F N       +LG
Sbjct: 172 TDPESKHKGTTAFIIEKDFE-----GFSVGKKERKLGIRSSPTTEIIFDNCRVPKENVLG 226

Query: 301 DLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           +L       +  KI +  LD     ++   V +A+     +I YA+ R   G  ++    
Sbjct: 227 ELG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASIDYAKEREQFGKPIVANQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I A+  L+++ A       S S+E+A A++MA  T       A  V  E
Sbjct: 281 VSFKLADMATSIEASRLLTYQAAWLESNKLSYSKESAMAKLMAGDT-------AMKVTVE 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG GY ++  + R+ R++    I  G+     L +  ++ K
Sbjct: 334 AVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEVQRLVISRMVTK 379


>gi|154303962|ref|XP_001552387.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10]
 gi|150854449|gb|EDN29641.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10]
          Length = 430

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 27/267 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +K+ DG Y L G K W  + P +D  ++ A+ E   G   +
Sbjct: 166 LAMSESGAGSDVVSMRTTAKKV-DGGYVLDGTKMWITNGPDADVIVVYAKTEPEKGSKGI 224

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    R  +K+G R + T EL F   F     +LG++N        +K+L
Sbjct: 225 TAFLVEKGFKGFSCARKLDKMGMRGSNTGELVFEGVFVPEENILGEVN------RGVKVL 278

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +S      M+ +L  A+ +  +R   G  +    +++  +AD+   + A+
Sbjct: 279 MEGLDIERLVLSAGPLGIMQAALDVALPFTHQRKQFGQPIAHNQLVQGKLADMYTKLQAS 338

Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A ++  A + DE  + R+++ A A IM      +  + A  V  + ++ +GG GY+EE 
Sbjct: 339 RAYTYDTARTVDETGNIRTQDCAGA-IM------YAAERATEVSLDCIQLLGGMGYVEEM 391

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
             +R  R++    I  G+G   V  V+
Sbjct: 392 PASRLLRDAKLYEI--GAGTTEVRKVV 416


>gi|50083857|ref|YP_045367.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49529833|emb|CAG67545.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 625

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I S+ +   DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 191 LTESHAGSDLGIIRSKAEPNEDGSYAISGEKIFISAGEHDMADNIIHIVLARLPGAPKGT 250

Query: 253 --VGCFLVPRLL--EDGSPNGLCYQR---LKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  EDGS     + R   +++K+G   NAT  + F    G+L+G  N  
Sbjct: 251 KGISLFIVPKFLVNEDGSLGERNHVRCGSIEHKMGIHGNATCVINFDRAKGYLIGPENRG 310

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 311 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKDRLAMRSLSGPKAPEKDADPIIVHP 370

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 371 AVRNMLLTQKAFAEGGRALVYLLAQYADVVEHGITEEERKFADNILSLLTPIAKAFLTET 430

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 431 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 478


>gi|87118372|ref|ZP_01074271.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121]
 gi|86166006|gb|EAQ67272.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121]
          Length = 599

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 49/335 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGLLKTKAEPQADGSYAISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   D        NG+    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKFNVDDQGEAADRNGVACGSIEHKMGIHGNATCVMNFDGAKGYLIGPENKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++    +L  ++ YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHSEWALQNSVSYARDRLQMRALSGPKAPEKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYA----RIMAPITKYWCCKMA 408
            ++R +           AL    +   D  K  S +E A+A     ++ PI K +  +  
Sbjct: 345 DVRRMLLTQKAFAEGGRALIHYCSMLVDITKKGSPDEKAHADELMSLLTPIAKAFLTETG 404

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                  M+  GG G+I E  + ++ R+   + +  G+     LD+L             
Sbjct: 405 YEAANLGMQVYGGHGFISEWGMEQNVRDCRISMLYEGTTGIQALDLLG------------ 452

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                + L S GK + T  +     CKE KG  RF
Sbjct: 453 ----RKVLMSQGKTLKTFTKIIHKFCKEHKGDKRF 483


>gi|254242880|ref|ZP_04936202.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192]
 gi|126196258|gb|EAZ60321.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192]
          Length = 593

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|167031196|ref|YP_001666427.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857684|gb|ABY96091.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 393

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDEGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPDENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|150019353|ref|YP_001311607.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149905818|gb|ABR36651.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +   K  +  Y L+G K F+++ P+S+ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGSDAGGCITTADKNGE-YYILNGAKCFITNGPLSETFLVFALTDKSKGAKGL 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313
              + +    G    +++NK G RS    EL F N              PVE++      
Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIRSAQVSELVFENC-----------KVPVENLVGAEGK 230

Query: 314 ----ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + V+   + +AE     A  Y + R   G  L     +   +A++ L
Sbjct: 231 GFGIAMKTLDGGRIGVAAQGLGIAEGAFEVAKQYMKEREQFGKPLWKNQYLAFKMAELEL 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  + ++ A    E K  S  AA A++        C   A  V  EA++ +GG+GY
Sbjct: 291 EIEQAKYMVYKAAMDKQEGKPYSVSAAKAKLA-------CTDAAMHVTTEAVQMLGGNGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E ++ R  R++    I  G+
Sbjct: 344 MREYNVERMMRDAKITQIYEGT 365


>gi|307544734|ref|YP_003897213.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307216758|emb|CBV42028.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 603

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   GTD+  I ++     D  Y LSG K F+S+   D       ++LA++       
Sbjct: 165 LTEPHCGTDLGLIKTRAVPNDDDSYTLSGTKIFISAGDHDLAENIVHLVLAKLPDAPAGS 224

Query: 251 GRVGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D  G+P   NG+    L++K+G   NAT  + F    GFL+G  +  
Sbjct: 225 KGISLFVVPKFLPDADGNPGERNGVSCGSLEHKMGIHGNATCVMNFDGARGFLVGKPHKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353
              +  M     +   I  +     S   A+ YAR     R +SG    D+P        
Sbjct: 285 LACMFTMMNAARIGVGIQGLGLTEASFQNALAYARDRLQMRALSGAKAEDKPADPIIVHP 344

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + ++A A+    +    A    +    D+ +          ++ PI K +  ++
Sbjct: 345 DVRRMLLTQKAFAEGGRMLVLYAAQMVDVVERSDDTEQTERAETLLGLLTPIVKAFLTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                 E ++  GG G+I+E  + +  R++    +  G+     LD+L    L+ +G  L
Sbjct: 405 GFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETL 464


>gi|158522377|ref|YP_001530247.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511203|gb|ABW68170.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 601

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 62/376 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +  +V +  T    + +  K+++ E+  T             + LTE   G+D+ A+T+ 
Sbjct: 133 AGRLVEVFGTQEQKETYLKKLYTGEWSGT-------------MLLTEAEAGSDVGALTTT 179

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RLLED 264
             K  DG Y +SG K F+S     M++  I  +LA++EG       +  FLVP  R+  D
Sbjct: 180 AVKNPDGTYSISGSKIFISGGEHDMTENIIHPVLARIEGAPPGTRGISLFLVPKYRVNAD 239

Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           GS    N +    ++ K+G   ++T  L         G LLG  N     +  M     L
Sbjct: 240 GSLGDFNDVVCTGIEEKMGIHGSSTCSLTLGGKGKCIGTLLGQENKGMSAMFVMMNEARL 299

Query: 319 DSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDI 366
              + +      S   A++YA+ R             V G  +I  P ++R + ++ + +
Sbjct: 300 LVGMQAFGCATASYMSALNYAKERIQGRPLTAGKDASVGGVPIIRHPDVRRQLMNMKVMV 359

Query: 367 AAATALSFRLANSFDE---AKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +L + +    D    A +  E+  Y     I+ PI K +    A  V +  ++  G
Sbjct: 360 EGMRSLHYYVGYCQDMAVLAGTEEEKEKYEGLVDILTPIAKGYGTDKAFEVCSHGVQVYG 419

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT---NLFEQLFSTLEQ 474
           G GY +E  + ++ R+     I  G+     +D+      ++KG    +LF ++  T+  
Sbjct: 420 GYGYTKEYPVEQYLRDCRITMIYEGTNGIQAMDLFGRKMTMKKGKLVMDLFGEIMKTV-- 477

Query: 475 DLGSSGKKVITILRDS 490
               +  K I  L+D+
Sbjct: 478 ----NAAKAIDSLKDA 489


>gi|104783924|ref|YP_610422.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95112911|emb|CAK17639.1| probable acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 598

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 46/307 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ +A I ++ +   DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAGDGTYRLKGNKIFISGGDHELSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L +     G  N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYLVNVDGSLGQRNDVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           +     G+L+G  +     +  M    +I + + + ++  +G   SL     YAR+R   
Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----DYARQRPQG 326

Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
                   H     +I+   +KR +      +  A  L    A  FD+  + ++E A  +
Sbjct: 327 RLPDNKDPHSPAVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENARRQ 386

Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W           A++ +GG GY  E  + ++YR++  N I  G+  
Sbjct: 387 ALELLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446

Query: 449 AMVLDVL 455
              LD+L
Sbjct: 447 IQSLDLL 453


>gi|295675629|ref|YP_003604153.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435472|gb|ADG14642.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 396

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 18/240 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +SP++D F++ A++E      + 
Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDNIR 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             +LE G   GL    +  K+G R++ T E+   + F   + + N+  G          L
Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDDVF---VPEENIMPGVSGLRGPFTCL 251

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATALS 373
           +SA   ++   +  AEA  +  R++V      G  L    ++++ +AD+  +I       
Sbjct: 252 NSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL    DE  + +E       +  I K   C  A  +   A + +GG+G  +E  +ARH
Sbjct: 312 LRLGRMKDEGTAATE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARH 364


>gi|229030226|ref|ZP_04186283.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228731070|gb|EEL81995.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 381

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|148652112|ref|YP_001279205.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571196|gb|ABQ93255.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 388

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  ++T++  K  DG   Y LSG K F+S   S   +++    G  G   V 
Sbjct: 124 LTEPNAGSDAGSLTTKAVK-QDGEDYYLLSGEKTFISGAGSTDILVVMARTGDAGPKGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312
             + D    G+ Y + ++K+G ++  T  + F        N  G        +   ++  
Sbjct: 183 AFVVDAHSEGISYGKNEHKMGWKAQPTRTIHFKDVKVPAKNLLGSEGEGFKFAMKGLDGG 242

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I     I +V   + +L  A++Y + R   G  + +   ++  +AD+     AA  +
Sbjct: 243 RINI----GICAVGTAQAALETALNYVQERKQFGSAIAELQSVQFKLADMLTQTIAARQM 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  AN  D  K  S+   Y      + K     ++ AV  EA++  GG GY+ E  + R
Sbjct: 299 LYLAANKVD--KKHSDATTYC----AMAKRLATDLSFAVANEALQLHGGYGYLNEYPLER 352

Query: 433 HYRESPANSILLGSGNAM 450
           H R+   + IL G+   M
Sbjct: 353 HVRDLRVHQILEGTNEIM 370


>gi|196041019|ref|ZP_03108316.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196028187|gb|EDX66797.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 379

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTTGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|206971677|ref|ZP_03232627.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|218230994|ref|YP_002367222.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218897497|ref|YP_002445908.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228901095|ref|ZP_04065301.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228952869|ref|ZP_04114938.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228958775|ref|ZP_04120487.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229070017|ref|ZP_04203293.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|229150738|ref|ZP_04278952.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|229178865|ref|ZP_04306225.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|229193927|ref|ZP_04320840.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|206733662|gb|EDZ50834.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|218158951|gb|ACK58943.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218546035|gb|ACK98429.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228589568|gb|EEK47474.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228604630|gb|EEK62091.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228632825|gb|EEK89440.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228713118|gb|EEL65017.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228800914|gb|EEM47819.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228806825|gb|EEM53375.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228858546|gb|EEN03000.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 381

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|313109647|ref|ZP_07795591.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310882093|gb|EFQ40687.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 593

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|289422724|ref|ZP_06424564.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156903|gb|EFD05528.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 380

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P+ + +     GLTE   G+D  A  +    + DG  Y L+G K W  ++P  D  I+ A
Sbjct: 114 PLAEGTKVGAFGLTEPGAGSDAGATATTA--VLDGDHYILNGRKCWITNAPFCDFAIVTA 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD--- 301
             E   G   +   + +    G  +   ++K+G R   T +L F N       LLG    
Sbjct: 172 VTEKGKGTKGISTFIVEAGWEGFSHGAHEDKMGIRGTRTSDLIFENVKVPKDNLLGKEGK 231

Query: 302 -LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              V    +E  +I +    A  +V   + +L EAI Y + R   G  L      +  IA
Sbjct: 232 GFVVMMNTLEAGRIGV----AAQAVGVAQSALDEAIKYTKERVQFGKPLSAFQNTQFTIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L ++ A   D+ KS +       I + + K++  ++A  V  +A++  G
Sbjct: 288 DMATKVEAARLLVYQAAQLKDDGKSPA-------IASSMAKFYAAEVANEVAYKALQLHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+++  I R YR++   SI  G+
Sbjct: 341 GYGYVKDYRIERIYRDARILSIYEGT 366


>gi|107103716|ref|ZP_01367634.1| hypothetical protein PaerPA_01004787 [Pseudomonas aeruginosa PACS2]
 gi|116052236|ref|YP_788920.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889472|ref|YP_002438336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|115587457|gb|ABJ13472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218769695|emb|CAW25455.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 593

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|262066901|ref|ZP_06026513.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291379370|gb|EFE86888.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 637

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F+++  +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GGS
Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|228908265|ref|ZP_04072110.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228921228|ref|ZP_04084557.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228939660|ref|ZP_04102242.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228965477|ref|ZP_04126563.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228972521|ref|ZP_04133128.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979131|ref|ZP_04139478.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|229044240|ref|ZP_04191914.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229109949|ref|ZP_04239530.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130893|ref|ZP_04259824.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|296503074|ref|YP_003664774.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|228652575|gb|EEL08482.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228673516|gb|EEL28779.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228725111|gb|EEL76394.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228780606|gb|EEM28826.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228787204|gb|EEM35176.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228794207|gb|EEM41725.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228819998|gb|EEM66041.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228838443|gb|EEM83755.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228851306|gb|EEM96115.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|296324126|gb|ADH07054.1| Acyl-CoA dehydrogenase, short-chain [Bacillus thuringiensis BMB171]
 gi|326940251|gb|AEA16147.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|168179253|ref|ZP_02613917.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum NCTC 2916]
 gi|226950255|ref|YP_002805346.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|182669735|gb|EDT81711.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum NCTC 2916]
 gi|226840911|gb|ACO83577.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A2 str. Kyoto]
          Length = 635

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTALLEGDHYILNGEKIFITNAGEADIYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + + S  G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L +  A+  +  +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 VTKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365


>gi|121701011|ref|XP_001268770.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119396913|gb|EAW07344.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 437

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 35/301 (11%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           ++ K W PK+               T       L+E   G+D  A+ ++ +K +DG Y L
Sbjct: 159 QLKKTWLPKL--------------ATDTVGSFCLSEPASGSDAFALQTKAEKTADG-YKL 203

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K W  +S  +  FI+ A ++   G   +   ++E G+P G    + + K+G R+++T
Sbjct: 204 NGSKMWITNSMEAGVFIVFANLDPSKGYKGITAFVVEKGTP-GFSIAKKEKKLGIRASST 262

Query: 287 VELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             L F +     G LLG+       + G + + +I I      +++ G   + A  +   
Sbjct: 263 CVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAASYVWND 321

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           RR+   G ++     M+  +A   ++IAAA AL +  A   +  +   ++AA A++    
Sbjct: 322 RRQF--GQLIGTFQGMQHQLAQAYVEIAAARALLYNAARKKEAGQDFVQDAAMAKL---- 375

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+
Sbjct: 376 ---YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQ 432

Query: 460 K 460
           K
Sbjct: 433 K 433


>gi|320335137|ref|YP_004171848.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756426|gb|ADV68183.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 22/267 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           AP+ +        L+E   G+D AA+ +    + DG  + ++G K W  +  ++D  ++ 
Sbjct: 112 APLVEKPALAAFALSEPNNGSDAAAMGTTA--VLDGDEWVINGTKMWISNGGVADITVVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299
           A  +   G      ++      G  Y ++K+K+G R++ T EL F N         G + 
Sbjct: 170 ATTDKNGGHKATVAIVVPKDAPGQSYNKIKHKLGQRASLTSELVFDNVRVPKDHILGGIG 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++   ++  +I +    A  SV   R ++ E+I YA+ R   G  +     ++  +
Sbjct: 230 DGFKIAMKTLDKTRIPV----AAGSVGVARRAMEESIKYAKERAAFGKPIATFQAIQFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ I     +S + A   D+      E+A       I K +C +MA     EA++  
Sbjct: 286 AEMAMGIETGRLMSLKAAWLVDQGLPHGYESA-------IAKAYCSEMAFNAANEAIQVH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+ E  + +  R+   N I  G+
Sbjct: 339 GGYGYVGEYPVEKLLRDVKLNQIYEGT 365


>gi|229145127|ref|ZP_04273519.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228638325|gb|EEK94763.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|86356551|ref|YP_468443.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86280653|gb|ABC89716.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 593

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 100/443 (22%), Positives = 187/443 (42%), Gaps = 67/443 (15%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L   G   G    D +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLVDGEVRLPDGWRDLYRSWISGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175
                +F    +   H +  A L +         ++P++T  ++ A+    +  +   + 
Sbjct: 91  LTAPEAFGG--QALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALKDKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+  + ++ ++ +DG Y +SG K F+
Sbjct: 149 AKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRISGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     +++A ++V    V+
Sbjct: 256 GIHGSPTCTMIYGDGRFGGEKGAIGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310

Query: 332 LAE-----AIHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALSFRLA 377
           +AE     A+ YAR R        SG G+  +I+ P + R +  +      A A+SF  A
Sbjct: 311 IAEAATQKALAYARERTQGRAPGWSGPGMSPIIEHPDVARMLLTMKALTQGARAISFACA 370

Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++ D ++   + + +    A ++ P+ K +       V +  ++  GG G+IEE   AR+
Sbjct: 371 HAIDMSRRAGDTSRHWQERAALLTPVAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARY 430

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++    I  G+     +D++ 
Sbjct: 431 LRDARIAPIYEGTNGIQAIDLVT 453


>gi|312876071|ref|ZP_07736060.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797269|gb|EFR13609.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 395

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 113 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 171

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +D +++ A  +   G    PR     ++E G     C ++ ++K+G R+++T EL 
Sbjct: 172 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 226

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F +       LLG     TG +  MK     D     V+ M V +A+     A+ YA+ R
Sbjct: 227 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAVRYAKER 281

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401
              G  L     ++  +AD+ ++I AA A+ +      D  AK  S+E++  ++ A    
Sbjct: 282 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 338

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 339 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 379


>gi|239826721|ref|YP_002949345.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239807014|gb|ACS24079.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 43/298 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK  S E             +   + +TE   G+D+A I++   K  D  Y
Sbjct: 103 TEEQKRKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGD-YY 148

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRL 275
            ++G K F+++ +    +++A       C   P            ++E  +P G    R 
Sbjct: 149 IVNGQKTFITNGIHADLVVVA-------CKTNPNAQPPHKGISLLVVERDTP-GFTRGRK 200

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G  +  T EL F++       LLG+       + +      L  AI + +   V  
Sbjct: 201 LDKVGLHAQDTAELFFNDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMF 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y ++R   G  + +   ++  +A++A +IA       R+     + K+     + 
Sbjct: 261 ELTKQYVKQRSAFGKRISEFQTVQFRLAEMATEIAIGRTFVDRVIEEHMQGKNVVTHVSM 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A       K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I  G+   M
Sbjct: 321 A-------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371


>gi|316966600|gb|EFV51153.1| acyl-CoA dehydrogenase [Trichinella spiralis]
          Length = 539

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 142/308 (46%), Gaps = 38/308 (12%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLS 236
           F  E    +  P+ ++ +     L+E + G+D  A+ +  ++  DG  + ++G K W  +
Sbjct: 206 FGSESQKKHYLPLLESHMVGAFCLSEVQSGSDAFALKTFAKQ--DGTDFVINGTKMWITN 263

Query: 237 SPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +  +D F+++A  +           + CF V R L      G+   + ++K+G R+++T 
Sbjct: 264 AEHADIFLVMATTDPSKVVYTGYKGISCFAVERALA-----GVSVGKKEDKLGIRASSTC 318

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA 339
            +   N       ++G   +  G    ++IL   +   + ++   + +A+      I Y 
Sbjct: 319 PVHLDNVRVPMSAVVG--TIGQGYKYAIEIL---NEGRIGIAAQMIGIAQGCLDRTIPYL 373

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + D   M+  +AD+  ++ AA  L++      +  ++  ++AA A++    
Sbjct: 374 KERKQFGRHIFDFQAMQHQVADMFTELEAARLLTYNAGRLLETGQTVVKQAAMAKL---- 429

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  +MA  V +  +E +GG G+I++  + ++YR+    +I  G+ N  +  +  +++
Sbjct: 430 ---YSSQMASKVTSRCIEWMGGVGFIKDYPVEKYYRDCKIGAIYEGTSNIQLNTIAKIID 486

Query: 460 KGTNLFEQ 467
           K T L  Q
Sbjct: 487 KHTGLANQ 494


>gi|313238943|emb|CBY13932.1| unnamed protein product [Oikopleura dioica]
          Length = 402

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++   K+ DG Y ++G K W  ++  ++A ++ A  +       +
Sbjct: 143 FGLSEPGNGSDAGAASTTATKV-DGGYVINGTKMWITNAYEAEASVIFATTDKSMKHKGI 201

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF+VP      + +G    + ++K+G R ++T  L + N F   + + N+   P    K
Sbjct: 202 SCFVVPN-----NSDGFSLGKKEDKLGIRGSSTASLIYENCF---VPEENLIGEPGFGFK 253

Query: 314 ILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIAD 361
           I      A+ ++ G R+ +A             A+ Y+  R      +    ++++ IAD
Sbjct: 254 I------AMNTLDGGRIGIAAQAIGIAQAAMDCAVKYSLDRKSFNVPIAKHQMIQQKIAD 307

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + I +A  L+++ A   D  +S ++ AA A++ A     W       V  ++++ +GG
Sbjct: 308 MEVKIESARMLNYKAAALKDNGQSYTKHAAMAKLAASEAATW-------VAHQSIQVLGG 360

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ +    RHYR++    I  G+
Sbjct: 361 MGFVSDMPAERHYRDARITEIYEGT 385


>gi|296269777|ref|YP_003652409.1| butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833]
 gi|296092564|gb|ADG88516.1| Butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833]
          Length = 386

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 38/298 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   T    ++W P++ S E              A+G   LTE   G+D A+++++
Sbjct: 98  AKTIAAHGTEEQKREWLPRLTSGE--------------ALGCFALTEPGTGSDAASVSTR 143

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRL 275
             +   G + ++G K F+++   +D  +  A+  E  +  FLVP         G     +
Sbjct: 144 AVR-DGGDWVINGAKMFITNGTWADLALTFARTSEKGITAFLVPT-----DTPGFRTTEI 197

Query: 276 KNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             K+G R  AT EL F       S   G +   L ++ G +   +I +    A  +V   
Sbjct: 198 HGKLGLRGQATAELTFDEVRVPDSARLGEVDRGLGIALGTLSRGRISV----AAGAVGLA 253

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L  A+ YA  R   G  +    +++  +AD A +I AA AL+ ++A   D   +  E
Sbjct: 254 QGALDAAVRYATERTQFGRPIASFQLVQELLADSAAEIKAARALTHQVARMVDAGATPKE 313

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  A     I KY+  +MA  V    ++  GG GYI+E    ++ R++   ++  G+
Sbjct: 314 YATDA----SIAKYFASEMAVRVANNCLQVFGGYGYIDEYPAGKYLRDARVLTLYEGT 367


>gi|87121780|ref|ZP_01077667.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121]
 gi|86163031|gb|EAQ64309.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121]
          Length = 607

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 44/316 (13%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS--- 236
           S E+  T   PM     A  + LTE   G+ +A IT+  +  +DG Y + G K F++   
Sbjct: 143 SEEHKATYLPPMMDGRFAGTMALTEPGQGSALADITTSAKPQTDGTYRIFGQKMFITGGD 202

Query: 237 SPMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRS 283
             ++D  I  +LA+VE        +  F+ P++L  EDGS    N +    L +K+G ++
Sbjct: 203 QSLTDNIIHMVLARVEDAPAGTKGISMFICPKVLVNEDGSLGERNDVALAGLLHKMGYKN 262

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLAEAI 336
             +  L F       G+L+G+ N     +     + +I +   ++++   G   SL    
Sbjct: 263 ATSTVLNFGEKDGAVGYLVGEENKGLSYMFQLMNEARISVGSGASLLGYQGYNYSL---- 318

Query: 337 HYARRRHVSGGILIDQPVMKRAI----ADIALDIAA-------ATALSFRLANSFDEAKS 385
            YAR R          P  K+      AD+   + A       + AL    ++ F+++++
Sbjct: 319 EYARNRPQGRPPTDRDPSSKQVNIVEHADVRRMLLAQKAYSEGSLALCLYASSLFEDSQT 378

Query: 386 RSEE----AAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            + E    AA+    ++ PI K +  K        A++ +GGSGYI E  + ++YR++  
Sbjct: 379 GATEEDRKAAFTLLDLITPIVKSFPSKYGLKANELAIQILGGSGYIREYPVEQYYRDNRL 438

Query: 440 NSILLGSGNAMVLDVL 455
           N+I  G+     LD+L
Sbjct: 439 NAIHEGTDGIHGLDLL 454


>gi|332307341|ref|YP_004435192.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332174670|gb|AEE23924.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 606

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 135/301 (44%), Gaps = 39/301 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++     DG Y + G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEPQCGTDLGQVKTKAIPNDDGTYDIVGTKIFISAGEHDLTENIIHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP++  D     G  N +    +++K+G ++++T  L F N  G L+G  N  
Sbjct: 225 RGISLFIVPKIQVDQQGNLGEGNQVTCGAIEDKMGIKASSTAVLNFDNAKGVLIGPKNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +A+  V    ++   ++ YA+ R              V+  I++  
Sbjct: 285 LECMFTFMNTARVGTALQGVCASELAYQNSLLYAKDRLSMRALTGKKCPDKVADPIIVHP 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEA---AYARI--MAPITKYWCCK 406
            V K  +   A+      A+ +  A   DE + +++EEA   A  R+  + PI K +  +
Sbjct: 345 DVRKMLMTQKAIS-EGGRAMIYYTAKIVDEIEMAKTEEARKVADDRLGFITPILKAFLTE 403

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463
           M     +  M+  GG GYI+E  + +  R+   +++  G+     LD+L    LL +G +
Sbjct: 404 MGCESTSHGMQVFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLGRKILLTRGKS 463

Query: 464 L 464
           L
Sbjct: 464 L 464


>gi|149377504|ref|ZP_01895245.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358196|gb|EDM46677.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 599

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + S+ +  +DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEPHCGSDLGTLRSKAEPNADGTYSITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 224

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  +DGS    N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKQLPNDDGSSGERNAVSCGSIEHKMGIHGNATCVMNFDGAKGWLIGPENRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353
              +        + +AI  +    +    ++ YA+ R     +SG     GI   +I  P
Sbjct: 285 LNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKDRLAMRSLSGPKNPEGIADPIIVHP 344

Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R      A+A+ A  +   TA    + +S    + R         + PI K +  ++
Sbjct: 345 DVRRMLLSQKAVAEGARALIYLTAQQADIVHSGKTEEDRKAADEALGFLTPIAKAFLTEI 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                   M+  GG G+I E  + ++ R++    I  G+     LD+L    L+ +G +L
Sbjct: 405 GYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 464


>gi|54293844|ref|YP_126259.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens]
 gi|53753676|emb|CAH15134.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens]
          Length = 384

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 155/380 (40%), Gaps = 55/380 (14%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P    +LR +   G+   +     E +   Q  ++ AA ++   QL  
Sbjct: 26  PMADFWDEQGYFPI--EILREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78

Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           G + + +  S     AS+V    +  + K W PK+ S E             V     LT
Sbjct: 79  GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D A++ ++  K  +  Y L+G K F+S   +SD ++ + +        +   L+
Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310
           E  +P GL + +L+ K+G R+  T  L F N              GF +  LN   G   
Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+ G    L  +  Y   R   G  L     ++   +D+  D  AA 
Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFSDMLTDYEAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +R A + D       +A  A +   + K     +A  +  +AM+  GG GY+ +  I
Sbjct: 295 LMVYRAAAAMDN------DAPNAPMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            R +R+   + IL G+   M
Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368


>gi|167031414|ref|YP_001666645.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857902|gb|ABY96309.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 601

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  NG+    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+    + YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D      + + R +  A    + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|256420334|ref|YP_003120987.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256035242|gb|ACU58786.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 35/284 (12%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   ++  IG  GLTE   G+D   +    ++  D  + L+G K W   
Sbjct: 101 FGSEEQKQRYLPKLASAEWIGAWGLTEPNTGSDAMNMKCVARREGDE-WVLNGTKCWITH 159

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
               D  +++A+  + R    +   ++E G+P G    + +NK+G R++ T E+ F N  
Sbjct: 160 GKSGDVAVVIARTGDVRDSHGMSAFVVERGTP-GFSGGKKENKLGMRASETAEMIFDNCR 218

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                +LG  N   G ++ MK+L   D   +S++ + + +A+     A+ YA+ RH    
Sbjct: 219 IPVANMLG--NEGDGFIQSMKVL---DGGRISIAALSLGIAKGAYEAALKYAQERH---- 269

Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              D+P+     +   +AD+A +I AA  L+ + A+        ++ AA A       KY
Sbjct: 270 -QFDKPIASFQGISFKLADMATEIMAAELLTMQAADGKTRGAKVTQHAAMA-------KY 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++A     EA++  GG GY ++  + + YR++   +I  G+
Sbjct: 322 YASEVAVKAANEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGEGT 365


>gi|228942488|ref|ZP_04105024.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975420|ref|ZP_04135975.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982055|ref|ZP_04142347.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228777593|gb|EEM25868.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228784214|gb|EEM32238.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817171|gb|EEM63260.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943139|gb|AEA19035.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPASGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|257388115|ref|YP_003177888.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170422|gb|ACV48181.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 385

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 130/276 (47%), Gaps = 39/276 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA- 247
           P+      +G  ++E   G+D+++++++ +K  D  + ++G+K W  +  + D F++L  
Sbjct: 112 PVATGDAIMGAAISEPDVGSDVSSVSTRAEKDGDE-WVINGNKMWITNGSIGDYFVVLCK 170

Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              + EGR   F   +++ +   +G    ++  K+G R++ T EL        +L D+ V
Sbjct: 171 TDPEAEGRYNGF--SQIVVEADRDGFEADKITGKLGIRASDTAEL--------ILDDVRV 220

Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
              P E++         +++ + D     V+   V +A+     A+ YA  R      + 
Sbjct: 221 ---PEENLVGTRGAGFLQLMQFFDETRTGVAAQAVGIAKGAAERALDYAEDREQFSKPIS 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  ++++   + AA  L+++ A S D    +        ++A + K +  ++A  
Sbjct: 278 EFQAIQHKLSEMHTQVEAARMLTYKSAWSVDNEDDQ------LTMLASMAKEFASRVAVE 331

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  EA++  GG+GY+ +  + R YR++    I  G+
Sbjct: 332 VADEAVQIHGGAGYVNDFDVERFYRDAKITQIYEGT 367


>gi|42784517|ref|NP_981764.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|42740449|gb|AAS44372.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|11968090|ref|NP_071957.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Rattus
           norvegicus]
 gi|202687|gb|AAA40669.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Rattus
           norvegicus]
 gi|48734846|gb|AAH72545.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Rattus
           norvegicus]
 gi|149063586|gb|EDM13909.1| acetyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Rattus
           norvegicus]
          Length = 414

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  ++  D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 154 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 213 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 264

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA  RH  G  L     ++  +AD+AL + 
Sbjct: 265 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 324

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++E+A A++ A        + A A+  +A++ +GG GY+ E
Sbjct: 325 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 377

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 378 MPAERYYRDARITEIYEGT 396


>gi|289622491|emb|CBI51113.1| unnamed protein product [Sordaria macrospora]
          Length = 473

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 28/267 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++ +  +K+  G Y L+G K W  + P +D  ++ A+ E   G    
Sbjct: 201 LAMSESGSGSDVVSMRTTAKKVEGG-YKLNGSKMWITNGPDADVIVVYAKTEPEAGSKGI 259

Query: 255 -CFLV-PRLLEDGSP-NGL-CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             F+V  + LE G   +G  C ++L +K+G R + T EL F N F     +LG +N   G
Sbjct: 260 TAFIVETKDLETGKKADGFECLRKL-DKMGMRGSNTGELVFENVFVPEENVLGKVN---G 315

Query: 308 PVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            V  +   + L+  ++S      M+ +L  A+ YA  R   G  +    +++  +AD+  
Sbjct: 316 GVRVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHSRKQFGTPIAQFQLLQGKLADMYT 375

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+ A ++  A + DE      +     I+      +  + A  V  +A++ +GG GY
Sbjct: 376 KLQASRAYTYTTAKTVDEQGIIKTQDCAGAIL------YAAERATEVALDAIQILGGMGY 429

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           +EE  ++R  R++    I  G+G + V
Sbjct: 430 MEEMPVSRIMRDAKLYEI--GAGTSEV 454


>gi|20150494|pdb|1JQI|A Chain A, Crystal Structure Of Rat Short Chain Acyl-Coa
           Dehydrogenase Complexed With Acetoacetyl-Coa
 gi|20150495|pdb|1JQI|B Chain B, Crystal Structure Of Rat Short Chain Acyl-Coa
           Dehydrogenase Complexed With Acetoacetyl-Coa
          Length = 388

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  ++  D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 128 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 186

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 187 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 238

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA  RH  G  L     ++  +AD+AL + 
Sbjct: 239 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 298

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++E+A A++ A        + A A+  +A++ +GG GY+ E
Sbjct: 299 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 351

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 352 MPAERYYRDARITEIYEGT 370


>gi|71754657|ref|XP_828243.1| isovaleryl-coA dehydrogenase [Trypanosoma brucei TREU927]
 gi|70833629|gb|EAN79131.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei]
          Length = 411

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 43/283 (15%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG 224
           +T    + W PK+ + E+              IG +G++E   GTD+  + +   K S+G
Sbjct: 136 STAAQRERWLPKVLTGEH--------------IGAMGMSEPGAGTDVLGMLTTATKESNG 181

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  +  ++D  ++ A+V+G++  F+V +       +G    +  +K G R 
Sbjct: 182 KYILNGGKTWVTNGTVADLVLVYAKVDGKITAFVVEK-----GASGFSVGKKIDKCGMRG 236

Query: 284 NATVELEFSNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           +   +L F N    +LG+ N+      G V  M+    L+   ++++ M V +A+     
Sbjct: 237 SHMCQLFFDNV---VLGEENLLGTEGKGLVAMMR---NLEVERLTLAAMAVGIADRCVEL 290

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              YA  R   G  + +   ++R IA+   +  AA +L++ ++ S              R
Sbjct: 291 MTCYANERKTFGKHIWNYGQIQRYIAETFAETEAAKSLTYAVSRSVAPGNCN-------R 343

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + +   K +   +A      AM+ +GG GY  +  + R +R++
Sbjct: 344 LGSDAVKLFAAPVAKRAADNAMQVMGGMGYARDMPVERLWRDA 386


>gi|309791992|ref|ZP_07686470.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308225986|gb|EFO79736.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 382

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  A  +      D  + ++G K W  ++P++   I+ A  +   G   +
Sbjct: 124 FGLTEPHAGSDAGATRTTAVLEGD-EWVINGSKMWITNAPVAGHVIVTAVTDKEKGKKGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++  G   G+ + + + K+G R + T  ++  N       LLG+          ++ L
Sbjct: 183 SAIIIPGGTPGMTFGKPEEKMGLRGSVTTAIQLENVRVPKENLLGERGKGF-----IQFL 237

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + +  M V LA+     A+ YAR R   G  +     +   IAD+ + ++AA 
Sbjct: 238 QVLDGGRVGIGAMSVGLAQGAYEAAVQYARERESFGQPIGKHQSVANMIADMEVAVSAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A      K  + EAA A++ A       C+       +A++ +GG GY +E  +
Sbjct: 298 LLVYQAAWLKQLGKPYTREAAVAKLYASEASEKVCR-------DAIQIMGGYGYSQEFPV 350

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R YR++    + +G G + +L
Sbjct: 351 ERMYRDT--RLLTIGEGTSEIL 370


>gi|146309443|ref|YP_001189908.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577644|gb|ABP87176.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 392

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 114 FGNEATKQRYLPKLASGEYIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRLTGSKMWITN 172

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 173 SPIADVFVVWAKDDAGEIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 227

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   D+    GP         L+SA   +S   +  AE     A  Y   RH  G 
Sbjct: 228 CPEENAFPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRHQFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 282 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  IARH
Sbjct: 335 ALDIARMARDMLGGNGISDEFGIARH 360


>gi|52140219|ref|YP_086610.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51973688|gb|AAU15238.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|26987110|ref|NP_742535.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|148545649|ref|YP_001265751.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|24981738|gb|AAN65999.1|AE016228_12 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|148509707|gb|ABQ76567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
 gi|313496734|gb|ADR58100.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 601

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  NG+    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V+    + YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D      + + R +  A    + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|91788874|ref|YP_549826.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698099|gb|ABE44928.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 389

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 30/266 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + ++E   G+D+  + +   K SDG Y L+G K F+++   +D  I++A+     G  G 
Sbjct: 124 IAMSEPAAGSDLQGVKTTAIKQSDGSYLLNGSKTFVTNGWHADLVIVVAKTNPAAGAKGT 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-DLNVSTGPVED 311
            L+  L+E G P     +RLK K+G ++  T EL F +     G LLG + + + G +  
Sbjct: 184 SLL--LVERGMPGFEVGKRLK-KLGLKAQDTSELFFHDVKVPAGHLLGGEAHENRGFICL 240

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L +  L  AI +VS  + ++   + Y + R V G  +      +  +A++  ++  A
Sbjct: 241 MEQLPWERLQIAITAVSAAQAAIDWTLAYVKERKVFGQPVASYQNTRYKLAELQTEVQVA 300

Query: 370 TAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
                       A+  D A             A + KYWC  +   V+ E ++  GG GY
Sbjct: 301 RVFVDKCTELVAADMLDTAT------------ASMAKYWCSDLQCKVMDECVQLFGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I R Y ++    I  G+   M
Sbjct: 349 MWEYPITRAYADARVQRIYGGTNEIM 374


>gi|228924077|ref|ZP_04087353.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229193594|ref|ZP_04320538.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228589899|gb|EEK47774.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228835567|gb|EEM80932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|170722513|ref|YP_001750201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760516|gb|ACA73832.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 60/306 (19%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ S E             +  G+ +TE   GTD+ AI ++ ++  D  Y
Sbjct: 106 TEEQKQRWLPKLSSGE-------------MLAGIAMTEPGCGTDLKAIATRARRDGDH-Y 151

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            + G K F+++  + + +++    G VG   L   ++E     G    RL  KIG  ++ 
Sbjct: 152 VIDGAKTFITNGFTCSLLIVVARTGEVGSKGLSLIVVETEDLPGFRVGRLLEKIGMPASD 211

Query: 286 TVELEFSNT---------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           T EL F +                F  L+G L     P E M I      A+ + + +  
Sbjct: 212 TAELFFGDVRVPVDQLLGGVEGHGFKQLMGQL-----PYERMSI------AVPAAAVIDR 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAK 384
           +L   I Y + R + G  L D    +  +A++A    A    +F      RL +      
Sbjct: 261 ALELTIEYTKERKIFGAPLFDMQATRHKLAELA--TIAHVVRTFVNDCIQRLLDG----- 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +EAAY      + K+WC +    V  E ++  GG G++ E  IAR Y  S    I  
Sbjct: 314 TLDDEAAY------MAKWWCTEQQCRVTDECLQLFGGYGFMAEYPIARMYAASRVQKIYG 367

Query: 445 GSGNAM 450
           G+   M
Sbjct: 368 GANEVM 373


>gi|111018540|ref|YP_701512.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818070|gb|ABG93354.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 382

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 179/409 (43%), Gaps = 70/409 (17%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A  A +  P  HA       WD+ +  P    +LR++   G+   I+ R
Sbjct: 8   ERAISDTARDFA--AEHLAP--HAV-----EWDQAKHFPV--DVLRKAASLGMG-GIYIR 55

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA----SMVALMT----TPRVHKDW 174
             E V   +  ++ AAR++   QL  G    PS+ +     +MV  M     T    + W
Sbjct: 56  --EDVGGSELTRVDAARIF--EQLAKG---CPSIAAYISIHNMVTWMIDRFGTDEQRRAW 108

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + S +         Q  S      LTE   G+D AA++++  +  D  Y L+G K F
Sbjct: 109 VPGLCSMD---------QLGSYC----LTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQF 154

Query: 235 LS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +S +  S+ ++++A+      G +  F+VP+    GSP GL +   + K+G  +  T ++
Sbjct: 155 ISGAGTSEVYVVMARTGEGGPGGISAFIVPK----GSP-GLSFGPNEVKMGWNAQPTRQV 209

Query: 290 EF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            F        N  G   G   ++   +   ++ I    A  SV G + +L  A+ Y   R
Sbjct: 210 IFEDVRVPAGNLLGSEGGGFRIAMAGLNGGRLNI----AACSVGGAQTALERAVAYLADR 265

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITK 401
              G  L+D   ++  +AD+  ++ AA  L +R A +  D A    E  A A+  A  T 
Sbjct: 266 KAFGAPLLDSQALQFQLADMRTELEAARTLLWRAAAALEDGAPDVVELCAMAKRFATDTG 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +        V   A++  GG GY+ E  I +  R+   + IL GS   M
Sbjct: 326 F-------EVANRALQLHGGYGYLAEYGIEKIVRDLRVHQILEGSNEIM 367


>gi|89901050|ref|YP_523521.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345787|gb|ABD69990.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 593

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 173/374 (46%), Gaps = 63/374 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+   +  + + +  K+ S ++  T             + LTE + G+
Sbjct: 124 LCPMLTDGAIEALLVAGSDELKRKFVGKLISGQWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+AA+ S  Q  +DG Y + G K F++    D       ++LA+V G       +  FLV
Sbjct: 171 DLAAVRSTAQPQADGSYKVFGTKIFITYGEHDMAENIIHLVLARVPGAPEGVKGISLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+L+  +DG+    N +    +++K+G +++ T  L+F +     G+++G  N     +E
Sbjct: 231 PKLMVGDDGALGARNDVACVSIEHKLGIKASPTAVLQFGDQGGAVGYVVGQENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------LIDQPVMKRAI 359
            M I++      + + G+ V+     +A+ +A  R  S  +        +I+ P +KR +
Sbjct: 288 YMFIMMNAARFAVGMQGIAVADRAYQKAVRFAHDRAQSRDLAGSDGPVSIINHPDVKRML 347

Query: 360 ADIALDIAAA-------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +           A S    ++ DE   ++ +A Y   + P+ K +  +M+  + 
Sbjct: 348 LTMRAHVEGTRALAYVAAAASDAAHHAADELTRKNNQAVY-EYLVPVVKGFATEMSVEMT 406

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGT---NLFE 466
           +  ++  GG GYIEE   A+H+R++   +I  G+      D++    L +KG     L  
Sbjct: 407 SLGVQVHGGMGYIEETGAAQHFRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALCA 466

Query: 467 QLFSTLEQDLGSSG 480
           Q+  T EQDL + G
Sbjct: 467 QIALT-EQDLSARG 479


>gi|330467508|ref|YP_004405251.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810479|gb|AEB44651.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 382

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 41/294 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P   +  A+G   LTE   G+D AA+T++  +  D  + L+G K F+++   +D  ++ A
Sbjct: 112 PALCSGTALGCFALTEPDSGSDAAALTTRAVRDGDD-WLLTGRKTFITNGTTADVALLFA 170

Query: 248 QVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
           +  G     +  FLVP      SP GL    +K K+G R  AT EL             G
Sbjct: 171 RTGGPGHRGITAFLVP----TDSP-GLSRSEIKGKLGLRGQATAELVLDGVRVPDTARLG 225

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
                  ++ G +   +         MSV+   V +A+     A+ YA  R   G  +  
Sbjct: 226 ECGAGFRLALGTLAKGR---------MSVAAGCVGIAQGCLNAAVDYAGARTQFGKPIAG 276

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +A IA+D AAA  L +++A+  D  +  + EA+ A++ A        + A   
Sbjct: 277 HQLVQQLLARIAVDTAAARLLVWQVADLIDRGQPYATEASMAKLFA-------SEAAVRA 329

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             +A++  GG GYI+E  + ++ R++   ++  G+     L +   L  G N F
Sbjct: 330 ANDAIQVFGGYGYIDEYPVGKYLRDARVTTLYEGTSQIQQLLIGRAL-TGVNAF 382


>gi|227500411|ref|ZP_03930473.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227217474|gb|EEI82793.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 561

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
           G GLTE+  G+D A   +      D  Y L+G K F++ +P +  +++ A      G   
Sbjct: 122 GFGLTEENAGSDSAGTQTTAVLKGDH-YILNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + D    G  +    +K+G RS+ T EL F+N       LLG         E+ K 
Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFNNVKVPKENLLG---------EEGKG 231

Query: 315 LIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADI 362
             Y   A+M + G R+ +A             A  Y   R   G  +         +AD+
Sbjct: 232 FKY---AMMILDGGRIGIASQALGIAQGAYESAKDYGLNREQFGQAIARMQHNAFILADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  L +  A   D+ +   ++AA A++ A         MA  + ++A++  GGS
Sbjct: 289 ATELKAARLLIYDAARKKDKHEPYGKDAAMAKLFA-------SDMAEKLTSKALQLYGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL 452
           G+I+   + R+YR+S    I  G+   M L
Sbjct: 342 GFIKGVDVERYYRDSKITQIYEGTNEIMRL 371


>gi|118616613|ref|YP_904945.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99]
 gi|118568723|gb|ABL03474.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 56/313 (17%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-- 218
           M+    T    KDW P++          A M   +      LTE   G+D +A++++   
Sbjct: 95  MIDSFGTDEQRKDWIPRL----------ATMDAIASYC---LTEPGAGSDASALSARAVR 141

Query: 219 QKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Q  + G  Y L G K F+S +  SD ++++A+   EG  G  +   ++E G+P GL +  
Sbjct: 142 QGSAPGSDYVLDGVKQFISGAGASDVYVVMARTGAEGPRG--ISAFIVEKGTP-GLSFGA 198

Query: 275 LKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIY 317
           L+ K+G  +  T ++                      FG  +  LN              
Sbjct: 199 LEEKMGWHAQPTAQVVLEGVRVPADAMLGGVDGTGAGFGIAMNGLNGGR----------- 247

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  S+ G + + A+   Y R R   G  L+D+P ++  +AD+A  + A+  L +R A
Sbjct: 248 LNIAACSLGGAQSAFAKTGAYVRERQAFGASLLDEPTVRFTLADMATGLEASRMLLWRAA 307

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           N+ DE  +   E      +  + K +       V  +A++  GG GY+ E  + +  R+ 
Sbjct: 308 NALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQLHGGYGYLREYGLEKIVRDL 361

Query: 438 PANSILLGSGNAM 450
             + IL G+   M
Sbjct: 362 RVHRILEGTNEIM 374


>gi|89069610|ref|ZP_01156949.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89044808|gb|EAR50908.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 592

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 62/381 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P + S ++  T             + LTE + GTD+  I ++ +   DG Y ++G K 
Sbjct: 148 WLPNMISGQWSGT-------------MNLTEPQCGTDLGLIRTRAEPAGDGSYRITGQKI 194

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277
           ++S+   D       ++LA++ G       +  F+VP+ L  +DG P   N +    +++
Sbjct: 195 WISAGEHDLTENIVHLVLARIPGAPEGTRGLSLFIVPKFLLDDDGRPGPRNAVSCGGVEH 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  +      G+LLG+ N     +  M     +   +  V+   V+   A  
Sbjct: 255 KMGFHGNATCVINHDGATGYLLGEENAGMRAMFTMMNEARIGVGLQGVAQAAVAYENAAA 314

Query: 338 YARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384
           +AR     R ++G          +I  P ++R + D    +    A     A+  D A +
Sbjct: 315 FARDRLQGRALAGAAAPERPADPIIVHPDVRRNLMDQKAFVEGGRAFLLWGASLIDRAHR 374

Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            R  +A     ++ P+ K +           A +  GG+G++ E  + +  R++    I 
Sbjct: 375 GRDADAEGLVSLLTPVIKGFLTDKGFETTVLAQQTFGGAGFVRETGVEQFVRDARITMIY 434

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR 502
            G+     LD++                  + LG+ G K I    + I + C+E  G   
Sbjct: 435 EGTNGVQALDLVG-----------------RKLGAGGGKYIMAYFELIKTWCREAAGDPD 477

Query: 503 FLTEKI-ALASSAAALYRAGM 522
           F    +  L +++  L +AGM
Sbjct: 478 FDAAFVEPLKTASKQLQQAGM 498


>gi|296478490|gb|DAA20605.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
          Length = 412

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 33/250 (13%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + LSG K W  ++  + A ++ A  +       +  FLVP         GL   + ++K+
Sbjct: 177 WVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPM-----PTPGLTLGKKEDKL 231

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           G R+++T  L F +       LLG+      P    KI +  LD+  + ++   + +A+A
Sbjct: 232 GIRASSTANLIFEDCRIPKDSLLGE------PGLGFKIAMQTLDTGRIGIASQALGIAQA 285

Query: 336 -----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                + YA  R   G  L     ++  +AD+AL + +A  L++R A   D  K  ++EA
Sbjct: 286 ALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEA 345

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A++ A        + A A+  +AM+ +GG GY++E    RHYR++    I  G+    
Sbjct: 346 AMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQ 398

Query: 451 VLDVLNLLEK 460
            L V   L K
Sbjct: 399 RLVVAGHLLK 408


>gi|239787389|emb|CAX83865.1| Probable acyl-CoA dehydrogenase protein [uncultured bacterium]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)

Query: 190 PMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD----AFI 244
           P   T   IG+  LTE + G+D A + ++  K  +  Y L+G K F++S  +     AF 
Sbjct: 110 PEMATGKKIGIFALTEPQAGSDAANLKTKAVKDGNSGYILNGTKQFITSGRNGQVMIAFA 169

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           +     G+ G   F+VP         G    R++ K+G  ++ T ++ F +        L
Sbjct: 170 VTDPAAGKKGITAFIVPT-----DTPGYKVWRVEEKMGQHASDTCQVLFEDMRLPVDLRL 224

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G       ++   +E  +I I    A  SV   + +L  AI YA+ R   G  +     +
Sbjct: 225 GQEGEGYKIALSNLEGGRIGI----ASQSVGMAKAALETAISYAKERTAFGKPIAQHQAV 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A+ I AA  L    A   DE     +EA+ A++ A        +MA  V+++A
Sbjct: 281 GFRLADMAMRIEAARHLVLEAARLRDEGLPCLKEASMAKLFA-------SEMAERVVSDA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 IQTLGGYGYLADFPLERIYRDVRVTQIYEGTSD 366


>gi|111019745|ref|YP_702717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819275|gb|ABG94559.1| probable long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii
           RHA1]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 19/300 (6%)

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V+S S+   + TP +  D A +   RE+ P     M +  V   +G+TE  GG+D+A++ 
Sbjct: 86  VSSFSIHFDIVTPYI-VDLATEETKREWLPQ----MAEGEVVAAIGMTEPAGGSDLASLK 140

Query: 216 SQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +    + DG  + L+G K F+++  S D  ++ A+ + +     +   L D S  G    
Sbjct: 141 TSA--VRDGSDWILNGSKTFITNGYSADLVVVAARTDPQQRSRGISLFLVDSSLPGFERG 198

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R  +K+G   + T EL F         +LG+       + +      L +A+ +V+  + 
Sbjct: 199 RKLDKVGQPESDTAELFFDGLRLPAAAMLGEPETGFAAMMERLPQERLGTAVANVAHAKQ 258

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L+E I Y R R   G  +      K  +A++   I  A A         D A +   E+
Sbjct: 259 ILSETIDYVRNRKAFGRSIGSFQHNKFLLAELVTKIEVAQAF-------VDAAVTEHAES 311

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             + + A   K+W   +   V+   ++  GG GY+ E  +AR + ++    I  GS   M
Sbjct: 312 GLSPVDAAKAKWWSAHVQNEVLDHCVQLYGGYGYMREYRVARAWMDARVTKIWAGSNEIM 371


>gi|16127623|ref|NP_422187.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221236440|ref|YP_002518877.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13425103|gb|AAK25355.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220965613|gb|ACL96969.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 603

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 42/293 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ------ 248
           + LTE + G+D+AA+T+      DG + ++G K +++    DA      ++LA+      
Sbjct: 177 MNLTEPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPP 236

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FL P++L  +DG     N L    L++K+G   + T  + F      L+G L
Sbjct: 237 GVKG-ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGL 295

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY---------ARRRHVSGGI----L 349
                      + + +++A + V    V++AE  +          A+ R    G     L
Sbjct: 296 GQGL-----PNMFVMMNAARLQVGTQGVAIAERAYQQALAFSQDRAQGRSAWTGAYPSRL 350

Query: 350 IDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            D P ++R +  +   I AA      TA++  LA +  +A +R+       ++ PI K W
Sbjct: 351 FDHPDVRRTLVLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLREELLTPIAKAW 410

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +   V ++ ++  GG G+IEE   A+HYR++    I  G+     +D++ 
Sbjct: 411 STDIGVWVASQGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVG 463


>gi|326795540|ref|YP_004313360.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
 gi|326546304|gb|ADZ91524.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
          Length = 582

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 56/341 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----E 250
           + LTE   G+D+AAI ++     D  + + G K F++     MS+  +  +LA++    E
Sbjct: 161 MNLTEPNAGSDLAAIRTKATPHEDH-FLIQGQKIFITWGDHQMSENIVHLVLARLPDAPE 219

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           G  G   F+VP+ L D     G  N +    L++K+G  ++ T  + F  T    G+L+G
Sbjct: 220 GVKGISLFVVPKFLVDENGALGRRNDVSVASLEHKMGIHASPTCVMAFGETSGAVGYLVG 279

Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG------- 347
           +      P + +K +   +++A   V    +++AE     A+ YA+ R V G        
Sbjct: 280 E------PNQGLKAMFAMMNNARQGVGLQGLAIAERAYQQALEYAQER-VQGYDSSRKNR 332

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSF---------RLANSFDEAKSRSEEAAYARIMA 397
             ++  P +KR +  +   I A+  L +         +LA   D+AK+ +E  A   +  
Sbjct: 333 VAIVAHPDVKRMLMTMKSLIDASRLLIYVAAVENDVSKLAVG-DQAKTAAELTA---LYT 388

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-- 455
           P+ K W  ++A  V + A++  GG G+IEE  +A+H R++    I  G+     +D++  
Sbjct: 389 PVVKGWITEIAQEVTSLAVQVHGGMGFIEETGVAQHARDARILPIYEGTNGIQAIDLIGR 448

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            LL    +    L + +  D+ +S  K    +   ++L K+
Sbjct: 449 KLLGDNASAMATLINQIVADVHASQSKYSEAVLSEVALFKQ 489


>gi|194014442|ref|ZP_03053059.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Bacillus pumilus ATCC 7061]
 gi|194013468|gb|EDW23033.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Bacillus pumilus ATCC 7061]
          Length = 380

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 46/329 (13%)

Query: 141 YLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           Y +A  E G    S  ++ A+ V+L  +P  +        + E    +  P+   +    
Sbjct: 69  YALAVEEIGKQCASTGLSYAAAVSLGASPLYY------FGTEEQKMDHLVPLASGTALGS 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GR- 252
            GLTE   G+D  A  ++ + + DG  Y +SG K W  ++  +   I+ A  +    GR 
Sbjct: 123 FGLTEPNAGSD--AKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTAVSDHDEHGRP 180

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F+V +        GL      +K+G R + T E+   N       +LGD      P
Sbjct: 181 IISAFIVEK-----GQKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHILGD------P 229

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  L     ++  +AD+
Sbjct: 230 NKGFKQFLYTLDGGRISIAALSVGIAQAALDASLSYAKERKQFGQTLSSFQAIQFKLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ I  A  + ++ A   D  K  ++EAAYA++ A        +MA     +A++  GG+
Sbjct: 290 AMQIELARQMVWKAAWLKDHGKPFTKEAAYAKLFA-------SEMATKASLDAVQIHGGT 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY++E  + R  R+  A  + +G G + +
Sbjct: 343 GYMKECGVERLVRD--AKLMEIGEGTSEI 369


>gi|30262538|ref|NP_844915.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47527836|ref|YP_019185.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|229602030|ref|YP_002866861.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|30257170|gb|AAP26401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47502984|gb|AAT31660.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|229266438|gb|ACQ48075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 381

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAVLAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|302189846|ref|ZP_07266519.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 600

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     LN     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|226355911|ref|YP_002785651.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317901|gb|ACO45897.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 378

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 22/267 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
            P+ + +      L+E   G+D AA+ +    + DG  + L+G K W  +  +++  ++ 
Sbjct: 111 GPLTEKAGLAAFALSEPNNGSDAAAMHTTA--VLDGDEWVLNGTKMWISNGGLAEITVVF 168

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299
           A  + + G      L+      G  Y ++K+K+G R++ T EL F N         G L 
Sbjct: 169 ATTDRQGGHKATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLG 228

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++   ++  +I +    A  SV   R ++ E++ YA+ R   G  +     ++  +
Sbjct: 229 DGFKIAMKTLDKTRIPV----AAGSVGIARRAMDESVKYAKEREAFGKPIAQFQAIQFKL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ I     +  + A   D+ +    E+A       I K +C +MA     EA++  
Sbjct: 285 AEMAMGIETGRLMYQKAAWLVDQGQPHGYESA-------IAKAYCSEMAFDAANEAIQVH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+ E  + +  R+   N I  G+
Sbjct: 338 GGYGYVGEYPVEKLLRDVKLNQIYEGT 364


>gi|300117855|ref|ZP_07055622.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|298724719|gb|EFI65394.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 379

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 34/299 (11%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F    
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFE--- 215

Query: 296 GFLLGDLNVSTGPVEDM--------KILIY-LDSAIMSVSGMRVSLAE-----AIHYARR 341
                D  +   PVE++        KI +  LD     ++   V +A+     ++ YAR 
Sbjct: 216 -----DCRI---PVENLLGEEGRGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A    
Sbjct: 268 RHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA---- 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                 A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 324 ---GDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|89890183|ref|ZP_01201694.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89518456|gb|EAS21112.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 389

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
           T   IG LG+TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  ++ A+ + 
Sbjct: 118 TGEKIGCLGITEPFGGSDVAGMRTTAVKDGDH-YVINGSKTFITNGVYSDYLVIAAKTDP 176

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
                 +   + D    G+   +L NK+G R++ T E+ F N       L+G+       
Sbjct: 177 DAKGRGISIFVMDRDTPGISATKL-NKLGWRASDTGEIGFDNVRIPAENLMGEEGKGFPY 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +     L  L   I + +    +L     Y R R   G  +     ++  +AD+  ++  
Sbjct: 236 IMQHFALERLIMGINAHARAEYALGYTAQYMRERTAFGTTIDKFQALRHGMADMYSEVEM 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A   ++ ++   D+     +EA+ +++++        K+A  VI + ++ +GG GYIEE 
Sbjct: 296 AKNFNYSISEQLDQGLYPVKEASMSKLVS-------TKIADEVIYKCLQYLGGYGYIEEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            +AR +R+S    I  G+   M
Sbjct: 349 PLARMWRDSRLGPIGGGTSEIM 370


>gi|290975558|ref|XP_002670509.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi]
 gi|284084069|gb|EFC37765.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi]
          Length = 394

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 130/272 (47%), Gaps = 20/272 (7%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           GLG   L+E   G+D  ++ ++ +  SDG Y L+G K W  SS  +  +I++A  +   G
Sbjct: 130 GLGSFCLSEASSGSDAFSLKTKAELQSDGSYVLNGTKCWITSSQEASFYIVMANTDFSKG 189

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   L D +  G+   + ++K+G R+++T E+   +     +G  ++  G  +  KI
Sbjct: 190 YKGITAFLVDKTNPGVKIGKKEDKLGIRASSTCEVILEDC---KVGPESILGGVGKGYKI 246

Query: 315 LI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            I  L+   + ++   + LA+ +      Y + R   G  + D  +M+   + +A +I A
Sbjct: 247 AIEMLNEGRIGIAAQMIGLAQGVFDYTMPYLKSRKQFGTPIADFQMMEYHYSKLATEIEA 306

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              + +  A   +  +  ++EAA A       K++  ++A  V  + +E +GG G+  + 
Sbjct: 307 GRLMVYNAARMKEAGQVFTKEAAMA-------KFYTSEVAGNVATKCIEMLGGVGFCRDF 359

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           S  ++YR+     I  G+ N  ++ +   ++K
Sbjct: 360 SAEKYYRDCIIGKIYEGTSNINLVTIAKHVKK 391


>gi|255319846|ref|ZP_05361051.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262380377|ref|ZP_06073531.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255303165|gb|EET82377.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262297823|gb|EEY85738.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 607

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 37/292 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++ +  +D  Y ++G K F+S+   D       I+LA++       
Sbjct: 165 LTEPQCGTDLGQLKTKAEPQADSTYKITGTKIFISAGEHDLTENIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L       G  N +    +++K+G +++AT  L F N  G+L+G+ N  
Sbjct: 225 KGISLFIVPKFLPTAEGSVGERNAVNCGSIEHKMGIKASATAVLNFDNATGYLIGEQNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +A+  ++   +S   A+ YA+ R              V+  I+   
Sbjct: 285 LHAMFTFMNTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344

Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
            V +  +   A+       +  + +LA+   +A +R + A Y           PI K + 
Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAQLADKMTDALARGDNAEYEEYDDKLGFYTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++        M+  GG GYI+E  + +  R++   ++  G+     LD++ 
Sbjct: 405 TELGLEAANHGMQVFGGHGYIKEWGMEQIVRDARIATLYEGTTGVQALDLIG 456


>gi|254427010|ref|ZP_05040717.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193179|gb|EDX88138.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 604

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 154/354 (43%), Gaps = 55/354 (15%)

Query: 142 LMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +MA       M P ++  +M  + +  T + H+D+               P+ + +    
Sbjct: 116 MMATANWSFSMYPGLSLGAMNTIQMHGTEQQHQDYL-------------VPLTEGTWGGT 162

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE + GTD+  + ++ +   DG Y +SG K F+SS   D       I+LA++    +
Sbjct: 163 MCLTEPQCGTDLGQVKTKAEPQKDGSYKISGTKIFISSGDHDLTENIVHIVLARLPDAPK 222

Query: 251 GRVGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           G  G   F+VP+ L    G  NG+    L+ K+G +++AT  + F    GFL+G  +   
Sbjct: 223 GTKGISLFIVPKYLPGKIGEDNGVSCGSLEKKMGIKASATCVINFDEATGFLIGPEH--- 279

Query: 307 GPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRH----VSG------------- 346
           G +E M   +    + +A+  V+   +S   A+ YA+ R     +SG             
Sbjct: 280 GGLECMFTFMNSARIGTAMQGVAHAELSYQGALPYAKERKSMRALSGKKEPDAIADSLIH 339

Query: 347 -GILIDQPVMKRAIAD--IALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402
            G +    + ++AIA+   A+   AA      +A    D+ K      +    + PI K 
Sbjct: 340 HGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMKKYEHWDSELGFLTPILKG 399

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  +       E M+  GG GYI+E  + +  R++  +++  G+     LD+L 
Sbjct: 400 FLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGTTGIQALDLLG 453


>gi|90022774|ref|YP_528601.1| acyl-CoA dehydrogenase family protein [Saccharophagus degradans
           2-40]
 gi|89952374|gb|ABD82389.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40]
          Length = 589

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 47/315 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK++S E+             A  + LTE   GTD+  I ++ Q  +DG Y ++G K F+
Sbjct: 152 PKMYSGEW-------------AGAMDLTEPHAGTDLGLIRTKAQPQADGSYAITGTKIFI 198

Query: 236 S---SPMSDAFIML-------AQVEGR-VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +     M+D  + L       A    R +  FLVP+++ +     G+ NG+    ++ K+
Sbjct: 199 TWGEHDMADNIVHLVLAKLPDAPAGSRGISLFLVPKVIPNADGSLGARNGVSCGSIEKKM 258

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G +++AT  + F    G+L+G+ N     +  M     L   +  +S    S   A  YA
Sbjct: 259 GIKASATCVMNFDGAQGWLVGEPNKGLMAMFTMMNYERLMVGVQGISVAEASYQNAAEYA 318

Query: 340 RR----RHVSGGILIDQ--------PVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +     R  SG  + D+        P ++R +  +        A    +A   D AK  +
Sbjct: 319 KERIQSRSPSGPQMPDKEADSLLVHPDVRRMLMTMRAYNEGGRAFYIYVARWLDTAKYGA 378

Query: 388 EEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            E           ++ P+ K +   +A        +  GG GYI E    +H R+     
Sbjct: 379 TEELRKHADNMVALLTPVAKAFMTDVAFDSAVMGQQVYGGHGYIREWGQEQHVRDIRITQ 438

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     +D++ 
Sbjct: 439 IYEGTNGIQAMDLIG 453


>gi|291412758|ref|XP_002722640.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain
           [Oryctolagus cuniculus]
          Length = 432

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 18/265 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  ++ +  +K  +  Y L G K W  ++  +D F+++A V+  +G   +  
Sbjct: 176 LSEAGAGSDSFSLKTTAEKKGN-YYILKGAKMWISNAGQADLFLVMANVDPALGYKGITS 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            L D    G    + +NK+G R+++T  L F N     + + N+        K  I  L+
Sbjct: 235 FLVDRDTEGFHIGKPENKLGLRASSTCPLTFENV---KVPESNILGQVGHGYKYAIGILN 291

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + LA+      I Y + R   G  L D   ++  +A +A  + AA  L++
Sbjct: 292 EGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 351

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   +  +   +EA+ A       KY+  ++A    ++ +E +GG GY ++  + +++
Sbjct: 352 NAARLLEAGRPFIKEASMA-------KYYASEIAGLTTSKCIEWMGGVGYTKDYPVEKYF 404

Query: 435 RESPANSILLGSGNAMVLDVLNLLE 459
           R+S    I  G+ N  +  +  +++
Sbjct: 405 RDSKIGVIYEGASNIQLNTIAKVID 429


>gi|222055283|ref|YP_002537645.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564572|gb|ACM20544.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 380

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGCFL 257
           ++E   G+D+  I +    + DG  Y +SG K F  + P++  + +LA+    GR G  L
Sbjct: 124 VSEPGAGSDVGNIRTTA--VRDGNHYVISGTKCFSTNGPIASFYTVLARTSENGRNG--L 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKI 314
              L+E  +P G    +++ K+G R + T E+   E     G LLG+ N   G    MK 
Sbjct: 180 TFFLVERDTP-GFSVGKIEKKLGQRGSKTSEMYLDEVRVPVGNLLGEEN--KGFNLAMK- 235

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
               D +  ++    + +AE      + +AR R   G  L +  ++++ IAD A  I AA
Sbjct: 236 --DFDMSRPAIGAQALGIAEGAFDQMLRHARERKTFGQALCEHQMIQQIIADSATAIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A  +D+ +  ++       +A + K +    A  +  +A++  GG GY+++  
Sbjct: 294 RGLVYRSAALYDQGQRNTK-------LASMAKLFASDAAMKITTDAIQVFGGYGYMQDYP 346

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 347 VERMFRDAKLTQIFEGA 363


>gi|260826029|ref|XP_002607968.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae]
 gi|229293318|gb|EEN63978.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae]
          Length = 383

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 26/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T       L+E   G+D  A+ ++  K  D  + L+G K W  +S  +  F++ A 
Sbjct: 113 PRLATDTVGSFCLSESESGSDAFALKTRADKKGD-YWVLNGSKMWISNSEQAGLFLVFAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +   G   +   L D    GL   + ++K+G R+++T  + F +       LLG L   
Sbjct: 172 ADSSQGYKGISTFLVDRDTPGLTIDKHEDKLGIRASSTCPVHFEDVKIPESHLLGTLG-- 229

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
                  K  I  L+   + ++   V LA+     A+ Y   R   G  + +   M+  I
Sbjct: 230 ----HGYKYAIGLLNEGRIGIAAQMVGLAQGCFDHAVPYTMDRKQFGQSIFNFQSMQHQI 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMEC 418
           ++IA +I AA  L +  A        R  EA +  I  A + K++  ++A    A+++E 
Sbjct: 286 SEIATEIEAARLLVYNAA--------RLREAGHPFIKQAAMAKFYAAEVAAKTTAKSIEW 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G+ ++  + + YR+    +I  G+ N  +  +   L++
Sbjct: 338 MGGVGFTKDYPVEKFYRDCKIGAIYEGTNNIQLSTIARYLKQ 379


>gi|93006278|ref|YP_580715.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393956|gb|ABE75231.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 597

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 141/331 (42%), Gaps = 51/331 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 164 LTEAHAGSDLGIIRTKAEPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGT 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP++   EDGS    N +    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 224 KGISLFIVPKVTVNEDGSLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +     +  + +A+  ++    +   ++ YA+ R              V+  I++  
Sbjct: 284 LQCMFTFMNVARIGTAVQGLTAAEYAFQGSLTYAKDRLAMRSLSGVKAPEKVADPIIVHP 343

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKM 407
            V    + + A       AL + L++  D  AK   +   +A     ++ PI K +  + 
Sbjct: 344 AVRNMLLTEKAF-AEGGRALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLTET 402

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                   ++  GG G+I E  + ++ R++    +  G+     LD+L            
Sbjct: 403 GLEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLG----------- 451

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
                 + LGS GK +   ++   + C+E+K
Sbjct: 452 -----RKVLGSQGKLLANFVKIIQTFCEENK 477


>gi|330826857|ref|YP_004390160.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329312229|gb|AEB86644.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 597

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 146/356 (41%), Gaps = 65/356 (18%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           P+  + +  G + LTE   G+ +  I +  +   DG Y +SGHK F+S    D       
Sbjct: 148 PLMASGICAGTMALTEPGQGSALGDIKTVAEPADDGSYRISGHKMFISGGDQDFSDNIVH 207

Query: 244 IMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEF- 291
           ++LA+++G       +  FLVP+ +       G  N +    L +K+G R+  +  L F 
Sbjct: 208 MVLARIKGAPAGVKGISLFLVPKFIPRADASRGERNDVALAGLLHKMGWRNTTSTVLSFG 267

Query: 292 --SNTFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                 G+LLG+ N         + + +I + L +A ++  G   SLA    YAR R   
Sbjct: 268 EKGGATGWLLGEPNRGLAHMFQLMNEARIGVGLIAACLAYRGFTESLA----YARER-PQ 322

Query: 346 GGI------------LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRS 387
           G +            +I+   +KR      A A+ AL +    +  F   +S  +   R 
Sbjct: 323 GRLPSCKNPLSPQVRIIEHADVKRLLLTQKAYAEGALALCLQASAWFEDQHSHPDQTRRE 382

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ P+ K W  +        A++ +GGSGY  E  + + YR+   N I  G+ 
Sbjct: 383 LAGHLLDLLTPVVKSWPSRYGCRSNDMAIQVLGGSGYTREYPVEQLYRDQRLNPIHEGTE 442

Query: 448 NAMVLDV----------------LNLLEKGTNLFEQLFSTLEQDL--GSSGKKVIT 485
               LD+                LNL+ + ++  E     L Q L  G+ G + +T
Sbjct: 443 AIHGLDLLSRKVRQADGVGLRAFLNLMRQESDAAEAPLQVLAQALRQGADGLEAVT 498


>gi|302383676|ref|YP_003819499.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194304|gb|ADL01876.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 594

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 138/321 (42%), Gaps = 43/321 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE + G+D+ A+TS      DG Y L+G K +++    DA      ++LA++       
Sbjct: 163 LTEPQAGSDLGALTSTATPNGDGTYSLTGQKIYITWGDHDATDNIVHMVLARLPDAPAGP 222

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FL  + L       G  N      +++K+G  ++ T  +++      L+G  N  
Sbjct: 223 KGISLFLANKFLVKADGTLGDRNAFRPVGIEHKLGIHASPTCVMQYEGATAELVGRPNEG 282

Query: 306 TGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGGILIDQPVMKR 357
              +  M    ++ + ++   ++    + +LA A+   + R V    +G  + D P ++R
Sbjct: 283 LAHMFTMMNAARVGVGMEGVGIADRAYQHALAYALDRRQGRSVWTGEAGAPIFDHPDVRR 342

Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411
            ++ +   I AA A+      + D A+       R+       ++ PI K W       +
Sbjct: 343 TLSVMKAKIEAARAICLSTGVAADMARHAATPEMRAHWKGREDLLTPIAKAWSTDAGVEI 402

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            ++ ++  GG G++EE   A+ YR++    I  G+     +D++                
Sbjct: 403 ASQGVQIHGGMGFVEETGAAQFYRDARIAPIYEGTNGIQAMDLVG-------------RK 449

Query: 472 LEQDLGSSGKKVITILRDSIS 492
           L QD G+S K VI  ++ +++
Sbjct: 450 LSQDGGASAKAVIAEMKATLT 470


>gi|160886528|ref|ZP_02067531.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483]
 gi|237723365|ref|ZP_04553846.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4]
 gi|260173358|ref|ZP_05759770.1| acyl-CoA dehydrogenase [Bacteroides sp. D2]
 gi|293373189|ref|ZP_06619551.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|299149419|ref|ZP_07042476.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23]
 gi|315921630|ref|ZP_07917870.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108413|gb|EDO10158.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483]
 gi|229447887|gb|EEO53678.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4]
 gi|292631837|gb|EFF50453.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298512606|gb|EFI36498.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23]
 gi|313695505|gb|EFS32340.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 568

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 155/343 (45%), Gaps = 36/343 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +      DG + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDANLHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ +     FE +
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFEAI 466

Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
             + E + L S  KK+      S +  KE  D+ L  F   K+
Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEVQDQELLDFTARKL 509


>gi|126324367|ref|XP_001376623.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 412

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  Q   D  + L+G K W  +S  + A ++ A          +
Sbjct: 152 FALSEPGNGSDAGAASTTAQLDGDS-WVLNGTKAWITNSWEASAAVVFATSSKSLKHKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   NV  G     K
Sbjct: 211 TAFLVPM-----PTPGLSLGKKEDKMGIRASSTANLIFEDC---RIPKDNVLGGTGTGFK 262

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA +R   G  L     ++  +AD+AL + 
Sbjct: 263 IAMQTLDMGRIGIAAQALGIAQAALDCAVDYAEKRMAFGSPLTKLQSIQFKLADMALALE 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  S+EAA A++ A        + A  +  +A++ +GG GY+ E
Sbjct: 323 SARLLTWRAAMLKDNQKPFSKEAAMAKLAA-------SEAATQIAHQAIQILGGMGYVTE 375

Query: 428 RSIARHYRESPANSILLGS 446
               RHYR++    I  G+
Sbjct: 376 MPAERHYRDARITEIYEGT 394


>gi|324326369|gb|ADY21629.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 572

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 38/320 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST 471
           L V  +L K     EQ+  T
Sbjct: 403 LTVAKMLMKQMEQMEQIEDT 422


>gi|257457881|ref|ZP_05623040.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
 gi|257444594|gb|EEV19678.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 26/268 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D     ++ + I DG  Y L+G K F++ +P +D +++ A
Sbjct: 116 PLAKGEKIGAFGLTEPNAGSDAGG--TETEYIDDGSNYILNGSKIFITNAPKADTYVIFA 173

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
                 G   +   + +    G  +    +K+G R++AT EL F+        LLG    
Sbjct: 174 ANPDVPGTKGISAFIVEKGDAGFEFGEHYDKLGIRTSATSELIFNEVTIPHDRLLGKEG- 232

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
                E  KI +  LD   + ++   + +A     EA+ YAR R   G  +  Q  +   
Sbjct: 233 -----EGFKIAMKTLDGGRIGIASQALGIAQGAYEEAVKYARTREQFGKPIGAQQNLAFK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   I AA  L ++ A    E K   E+      MA   K +   +A  V+ +A++ 
Sbjct: 288 LADMLTKIEAARLLIYKAA----EKKENHEDYGLDSAMA---KMYASDIALEVVNDALQI 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GGSG+I+   + + YR++   +I  G+
Sbjct: 341 HGGSGFIKGIPVEKMYRDAKITTIYEGT 368


>gi|322492910|emb|CBZ28190.1| putative isovaleryl-coA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 410

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 41/307 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     W PK+ + E+              +G +G++E   GTD+  +    +K S+G 
Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +  ++D F++ A+V+G++  F V R ++     G       +K G R++
Sbjct: 181 YVLNGSKIWITNGTVADVFLIYAKVDGKITAFAVERGMK-----GFTQGPKIDKCGMRAS 235

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
              +L F +       LLG+     G V  M+    L+   ++++ M V +AE       
Sbjct: 236 HMCQLFFEDVVVPAENLLGE--EGKGMVGMMR---NLELERVTLAAMAVGIAERSVELMT 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  + +   ++R IA+   D  AA AL + ++++              R+ 
Sbjct: 291 SYASERKAFGQSISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNKN-------RLG 343

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +   K +   +A  V   A++ +GG GY +   + R +R++    I  G+  A   ++  
Sbjct: 344 SDAAKLFATPIAKKVADSAIQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAHHKNITK 403

Query: 457 LLEKGTN 463
            L KG N
Sbjct: 404 DLLKGHN 410


>gi|226365367|ref|YP_002783150.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243857|dbj|BAH54205.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 464

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 54/318 (16%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    TP     WAP+ F    +P N   ++  ++ I    +E  GG+D+  + +   
Sbjct: 96  SSIGQAATPEQMLRWAPECFG---EPGN---LKLAALCI----SEPEGGSDVRNLRTTAT 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  ++D  ++ A V+  +G      F+VP     GSP G+   
Sbjct: 146 RDGDD-WVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVP----GGSP-GIELV 199

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN---------------VSTG-PVEDMKI 314
           R  +K+G R++ T EL+F         LLG  +               V+TG P      
Sbjct: 200 RKLDKLGCRASHTAELKFHRVRVPADHLLGGDDKLQHRMRKAREVQEEVATGAPRRKSAT 259

Query: 315 LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   +      A  ++   R +L  A  YA RR   GG +ID   +   +AD+A  I AA
Sbjct: 260 LGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLATQIDAA 319

Query: 370 TALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++R +  +    + R  E + A++ A        ++A      A++ +GG GYI + 
Sbjct: 320 RLLTWRASWMAATGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWGYISDH 372

Query: 429 SIARHYRESPANSILLGS 446
            + + YR++   +I  G+
Sbjct: 373 PVEKWYRDAKLYTIFEGT 390


>gi|56965647|ref|YP_177381.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56911893|dbj|BAD66420.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 380

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 35/287 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T+ AIG   LTE   G+D  A+ ++  K  +G Y L+G K F+++   +D +++ A
Sbjct: 113 PKLATAEAIGAFCLTEPNAGSDARALQTRAVKKGEG-YVLNGSKVFITNGGEADTYLVFA 171

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +   G     CF+V    E G+P GL   + + K+G   + T E+ F +       +L
Sbjct: 172 VTDADKGAKGISCFIV----EAGTP-GLIVGKKERKLGLAGSTTTEIIFEDCKVPQTQML 226

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
           G+        + +KI L  L++  + ++   + +AEA       YA  R   G  L++  
Sbjct: 227 GEEG------QGLKIALSNLNAGRIGIAAQALGIAEAALEAACTYANERKQFGKKLLNHQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A +  AA  L++  A   +     ++EA+ A++ A  T       A  V  
Sbjct: 281 GLAFKLADMATETEAAKQLTYAAARLKEAGTPCAKEASMAKLFASRT-------AMDVAT 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++  GG GY++E  + R++R++ A  I  G+     + +    EK
Sbjct: 334 KAVQVFGGYGYMKEYPVERYFRDAKACEIYEGTSEIQKMVIARQFEK 380


>gi|229173199|ref|ZP_04300748.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228610283|gb|EEK67556.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 381

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           + G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|149182452|ref|ZP_01860927.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus sp. SG-1]
 gi|148849845|gb|EDL64020.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus sp. SG-1]
          Length = 378

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +D +I+ A  +   G   +  
Sbjct: 124 LTEPSAGSDAGSLKSRAIK-KDDHYVINGAKVFITNGGEADVYIVFAATDPDKGGRGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLHGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +AEA       YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KIAMANLDVGRIGIAAQALGIAEAAFEHSTAYAKERAQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L +R AN   E  +  +EA+       I K +  K A  V  EA++  GG GY E
Sbjct: 292 EASKLLVYRAANMRSEGLNCGKEAS-------IAKLFASKTAVDVTTEAIQVYGGYGYTE 344

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 345 EYPVERLFRDAKVTEIYEGT 364


>gi|205375296|ref|ZP_03228086.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
 gi|205375427|ref|ZP_03228216.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 378

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ ++     D  Y L+G K F+++   +D +++ A  +   G   +  
Sbjct: 124 LTEPSSGSDAGSLRTRAVLEGDQ-YRLNGSKIFITNGGEADTYVVFASTDPEKGTRGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    GL   + + K+G   + TV+L F +    L+   N+     E  KI +  LD
Sbjct: 183 FIVEKDTPGLVIGKDEEKMGLHGSRTVQLTFED---MLVPASNLLGAEGEGFKIAMANLD 239

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AEA     + YA+ R   G  +  Q  +   +AD+   I A+  L +
Sbjct: 240 VGRIGIAAQALGIAEAAFDEAVEYAKERVQFGKPIAAQQGLAFKLADMGTAIEASKLLVY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + AN   E +   +EA+ A++ A        K A  V  EA++  GG GY E+  + R++
Sbjct: 300 QGANLRTEGRPCGKEASMAKLFA-------SKTAVHVTTEAIQVFGGYGYTEDYPVERYF 352

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 353 RDAKVTEIYEGT 364


>gi|119494950|ref|XP_001264273.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119412435|gb|EAW22376.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 437

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K +DG Y L+G K W  +S  +  F++ A ++   G   +  
Sbjct: 178 LSEPASGSDAFALQTKAEKTADG-YKLNGSKMWITNSMEAGVFVVFANLDPSKGYKGITA 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMK 313
            + +    G    + + K+G R+++T  L F +     G LLG+       + G + + +
Sbjct: 237 FVVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGR 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I      +++ G   + A  +   RR+   G ++     M+  +A   ++IAAA AL 
Sbjct: 297 IGIAAQMTGLAL-GAWENAASYVWNDRRQF--GQLIGTFQGMQHQLAQAYVEIAAARALV 353

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +   ++AA A       K++  ++A  V + A+E +GG G++ E    + 
Sbjct: 354 YNAARKKEAGQDFVQDAAMA-------KFYASQVAGRVASSAVEWMGGMGFVREGIAEKM 406

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +  LL+K
Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|312963450|ref|ZP_07777932.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311282256|gb|EFQ60855.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 601

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 49/341 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    L++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLPNADGSIGERNAVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   +     + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D  K  +++ A  +       M PI K +  ++        
Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGTDDEAKKQADGLLAFMTPIAKAFMTEVGFESANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|254506623|ref|ZP_05118764.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16]
 gi|219550496|gb|EED27480.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16]
          Length = 384

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 46/320 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   T  V + +  K+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFATDAVKQRYCDKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCY 272
             K  D  Y L+G K F+S    +D  +++A+        V  F+VP      S  G+ Y
Sbjct: 140 AIKQGD-RYILNGAKAFISGAGDTDVLVVMARTSDDGAKGVSAFVVP-----ASAEGISY 193

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVS 326
            R + K+G  S  T  + F    G ++ D +      E     +       ++ A  S+ 
Sbjct: 194 GRKEPKMGWNSQPTRSVTFD---GVVIPDDHRLGAEGEGFTFAMKGLDGGRINIATCSIG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L +A  Y + R   G  + D   ++  +AD+A ++ AA  L    A   D+  + 
Sbjct: 251 TAQQALNQATQYIQERKQFGKRIADFQSIQFRLADMATELVAARQLVRLAACKLDQ--NS 308

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S+  AY      + K +   +   V  +A++  GG GYI+E  + R++R+   + IL G+
Sbjct: 309 SDATAYC----AMAKRYATDIGFKVCDQALQLFGGYGYIQEYPMERYFRDVRVHQILEGT 364

Query: 447 GNAMVLDV-LNLLEKGTNLF 465
              M L +   LL +G  L 
Sbjct: 365 NEIMRLIISRRLLAQGAQLL 384


>gi|162455189|ref|YP_001617556.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161165771|emb|CAN97076.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 389

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 17/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQV---EGRVGC 255
           LG++E   G+D+A I +  +K  D  Y L+G K F+++     F+ +LA+    +G  GC
Sbjct: 124 LGVSEPAAGSDVAGIRTIARKEGDD-YVLNGQKTFITNGTRADFVTLLAKTSPDKGAHGC 182

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             FLVP  L      G    +   KIGN+S+ T EL   +      +LLG+ +     + 
Sbjct: 183 SFFLVPTAL-----RGFNVAKKLKKIGNKSSDTAELFLEDVRVPGRYLLGEPDQGFAYLM 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L +A+ +++   ++L   + Y R R   G  +I +   +  + D+     AA 
Sbjct: 238 QNFQTERLVAAVSAIASSFMTLDGTVEYGRERVAFGKPIIKRESWQHKLVDLYTRCEAAR 297

Query: 371 ALSFRLANSF-DEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A +++  + + DE   R    ++  + +  + K     +A  V+   ++  GG GYIE+ 
Sbjct: 298 AFAYKCVDHYNDERYVRKVPISFDTVKLISMAKILAGDVANDVVDTCLQFHGGWGYIEDF 357

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR +R+     I  G+   M
Sbjct: 358 PIARAWRDQRLLRIGGGTTETM 379


>gi|153006023|ref|YP_001380348.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029596|gb|ABS27364.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 598

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 59/346 (17%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL    +  + + + PK+ S E+  T             + LTE + G+
Sbjct: 125 LCPMLTRGAIAALELKGSEELKRRYLPKLTSGEWTGT-------------MVLTEPQAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++A+ ++  +  DG Y L G K F++    D       ++LA+     EG  G   F+V
Sbjct: 172 DLSAVRTRAVRQGDGSYRLEGQKIFITYGDHDLTENIVHLVLARTPDAPEGVKGISLFVV 231

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P++L   DGS    N +    +++K+G  ++ T  L F +     G+L+G+ +     +E
Sbjct: 232 PKVLVNADGSLGPRNDVRCVSIEHKLGIHASPTAVLAFGDREGAVGWLVGEEHRG---LE 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I ++ A  +V    V LAE     A+ YAR R     +         ++  P ++
Sbjct: 289 YM--FITMNEARYAVGLEAVGLAERAYQAALAYARERLQGTELGARSKEKVPILRHPDVR 346

Query: 357 RAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +       +    +A  TA +   A    +A+ R+   A+  +  PI K W    A  
Sbjct: 347 RMLLLMKSRTEAMRAVACVTAAAMDAARCHPDAERRARSQAFVELTIPIVKAWSSDSAIE 406

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + +  ++  GG GY+EE   A+  R++   SI  G+     +D++ 
Sbjct: 407 IASLGIQVHGGMGYVEETGAAQLLRDARITSIYEGTNGIQAVDLVG 452


>gi|116695314|ref|YP_840890.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113529813|emb|CAJ96160.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 385

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 30/294 (10%)

Query: 151 LMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           L+  +V   S   LM  TP     W P++ + E             +     LTE   G+
Sbjct: 85  LLGTTVGIGSQGILMDGTPEQQAAWLPRLATGE-------------ILASFALTEPDAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           D  ++ +   +  D  Y ++G K F++ +P +  F ++A+    + G   V   + D   
Sbjct: 132 DAGSLRTTAVRNGDH-YVVNGTKRFITNAPQAGMFTLMARTNPEIKGSAGVSAFIVDART 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAI 322
            G+ + +   K+G +   T ++ F N       L+G L    G    MK+L    L  A 
Sbjct: 191 PGISFGKRDVKMGQKGAHTCDVIFDNVRVPAENLIG-LKEGQGFKTAMKVLDKGRLHIAA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +SV   R  L +A++YA  R   G  + +  +++  +AD   ++ AA  +    A   DE
Sbjct: 250 VSVGVARRVLRDALNYALERQQFGQPICEFQLIQAMLADSQAELYAAECMVIDAARRRDE 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++ S EA+         K +  +M   V   A++ +GGSGYI E  I R YR+
Sbjct: 310 GRNVSTEAS-------CCKMFATEMVGRVADRAVQILGGSGYISEFGIERFYRD 356


>gi|220917382|ref|YP_002492686.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955236|gb|ACL65620.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 389

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 22/255 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLV 258
           L+E + G+D  A+ ++  +  DG       +W  S  ++   ++ A+    E   G  + 
Sbjct: 125 LSEPQAGSDAGAMRTRAVRRGDGWVIDGAKQWITSGDVAGVLVVWARTGPAEAGGGGGVT 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
             L+E G+P GL   R ++K+G R+++TV L F       S   G +   L V+   ++ 
Sbjct: 185 AFLVEQGTP-GLLVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDG 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++ I    A  +   +R +L  ++ YAR R   G  + +   +   +AD+A++   A  
Sbjct: 244 GRVGI----ASQATGTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTARL 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ R A   +  +  + EA+ A       K W  + A   +  A++  GG GY E+  +A
Sbjct: 300 LALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVA 352

Query: 432 RHYRESPANSILLGS 446
           R++R++   +I  G+
Sbjct: 353 RYFRDARVQTIYEGT 367


>gi|169860487|ref|XP_001836878.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130]
 gi|116501600|gb|EAU84495.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130]
          Length = 416

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 31/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+ ++ +K  DG  + ++G K W  +S  ++ F++ A V+   G     
Sbjct: 160 LSEPASGSDAFALQTRAKK--DGNDWIINGSKMWITNSYEAEIFLIFANVDPSKGYKGIT 217

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL  + +      G+   + + K+G R+++T  +   +     + + N+  G  +  KI
Sbjct: 218 CFLATKDM------GVQIAKKEQKLGIRASSTCTISLDD---LKVPEENIIGGIGKGYKI 268

Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            I  L+   + ++   + LA+     A+ Y   R   G  +     M   IA  A+DI  
Sbjct: 269 AIEILNEGRIGIAAQMLGLAQGAFDKAVPYTYERKQFGQAIGTFQGMAFQIAQAAIDIET 328

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +++  A   +E    ++EAA A       KYW   +A  V  +A+E  GG G+  E 
Sbjct: 329 ARLMTYNAARRKEEGLPFTKEAAMA-------KYWASVVAQRVSGQAIEWAGGVGFTRET 381

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            I + +R+S   +I  G+ N  +  +   ++K
Sbjct: 382 GIEKFWRDSKIGAIYEGTSNIQLQTIAKFIQK 413


>gi|118480375|ref|YP_897526.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196045470|ref|ZP_03112701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|225867323|ref|YP_002752701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|229187567|ref|ZP_04314707.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|118419600|gb|ABK88019.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196023677|gb|EDX62353.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|225787815|gb|ACO28032.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|228595934|gb|EEK53614.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|27374346|gb|AAO01087.1| Arc42-PA [Drosophila willistoni]
          Length = 405

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  +   ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGD-RWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+ ++     G    + ++K+G R ++T +L F +     +   N+   P    K
Sbjct: 204 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + +A+A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALE 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  +S ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDNKQSYTKEAAMAKLAASEAATLCSH-------QCIQVLGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|319763010|ref|YP_004126947.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825090|ref|YP_004388393.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117571|gb|ADV00060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310462|gb|AEB84877.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 389

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVE 250
           A+   L+E+  G+D AAIT+   +  DG + + G K W  +   S+ FI+ A        
Sbjct: 123 AVNFALSERGAGSDAAAITATAVREGDG-WRIRGEKCWLGNGGHSEHFIVFALTGEPGAR 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNV 304
             +  F VPR     S  G      ++K+G R   T   +       S+  G     L +
Sbjct: 182 NNISAFWVPR-----STPGAAVDFYEDKMGIRGTTTTNFKVDVWVPRSSMVGSEGHGLKL 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   +   +I++   +  +++   R     A  +A +R   G  +ID   +   +AD A 
Sbjct: 237 ALSTLNIGRIVVAAQALGIALCSYRA----AAEFATQRQTFGQAIIDHQGVGFMLADAAT 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            ++AA  + +  A ++DE +  S   A A++ A    +  C        +AM+ +GG GY
Sbjct: 293 SLSAARMMVYEAAKAYDEGRDVSTLGAMAKLFASEAAHKVCD-------DAMQILGGRGY 345

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++  ++ R YR+     I  G+
Sbjct: 346 VKPSAVERCYRDQRITEIYEGT 367


>gi|157692556|ref|YP_001487018.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157681314|gb|ABV62458.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 380

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P+   +     GLTE   G+D  A  ++ + + DG  Y +SG K W  ++  +   I+ A
Sbjct: 113 PLASGTALGSFGLTEPNAGSD--AKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTA 170

Query: 248 QVE----GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
             +    GR  +  F+V +        GL      +K+G R + T E+   N       +
Sbjct: 171 VSDHDEHGRPIISAFIVEK-----GQKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352
           LGD      P +  K  +Y LD   +S++ + V +A+A     + YA+ R   G  L   
Sbjct: 226 LGD------PNKGFKQFLYTLDGGRISIAALSVGIAQAALDASLSYAKERKQFGQTLSSF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A+ I  A  + ++ A   D  K  ++EAAYA++ A        +MA    
Sbjct: 280 QAIQFKLADMAMQIELARQMVWKAAWLKDHGKPFTKEAAYAKLFA-------SEMATKAS 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG+GY++E  + R  R+  A  + +G G + +
Sbjct: 333 LDAVQIHGGTGYMKECGVERLVRD--AKLMEIGEGTSEI 369


>gi|94314426|ref|YP_587635.1| long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358278|gb|ABF12366.1| Long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 385

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 22/321 (6%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           E G ++ P + + S+ + +    +H ++A +   +E+ P     M K  +  GL +TE  
Sbjct: 77  EQGRMLCPGLGN-SLHSGIVAHYIH-NFASEQQKQEWLP----KMAKGELVGGLAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLL-ED 264
            G+D+ +I +  +K   G Y ++G K ++++  +   I ++ + +  +G   +  ++ E 
Sbjct: 131 AGSDVQSIRTAARK-EGGDYVINGAKTYITNGSTANLICVVVKTDPNLGAKGISIIVVET 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LD 319
               G    R  +K+G  S  T EL F +       LLG++    G  + MK L    + 
Sbjct: 190 DKVEGFRRGRTLSKVGLHSQDTAELFFDDVRVPQANLLGNVE-GQGFKQLMKELSRERVI 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A MS++ M  ++ E + +A  R V G  L+     +  +A+    +  A A+    + S
Sbjct: 249 TAFMSMACMERAIEETLKFAADRKVFGQTLLSMQNTRFKLAECETKLTLAKAMLSHCSAS 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             E +  SE AA A       K+W       V+ E ++  GG+G++ E  IAR Y+    
Sbjct: 309 LLEGQLSSEIAAMA-------KWWITDACGQVVDECVQLHGGAGFMLEYPIARLYQNVRI 361

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
           + IL G+   M   +   LEK
Sbjct: 362 HRILAGTNEIMKEVIARELEK 382


>gi|119474784|ref|ZP_01615137.1| putative acyl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2143]
 gi|119450987|gb|EAW32220.1| putative acyl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2143]
          Length = 614

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 157/382 (41%), Gaps = 84/382 (21%)

Query: 160 SMVALMTTPRVHKDW-----APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SM AL +   +  D+      PK+ + E+  T             + LTE   GTD+  +
Sbjct: 130 SMAALWSLMALGNDFQKSVIVPKLVAGEWTGT-------------MNLTEPHCGTDLKLM 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVE----------GRVGCFLVP 259
            ++     DG Y ++G K F+S     ++D  I  ++A+V           G V  F+VP
Sbjct: 177 KTKAVAQDDGTYRITGTKIFISGGDHDLTDNIIHMVIAKVPDDHGKLNDSLGAVNFFMVP 236

Query: 260 RLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-----------GDLN 303
           + L  EDGS    NG+    ++ K+G + NAT  L + N   + +           G+  
Sbjct: 237 KFLINEDGSIGEANGVSTGSIEKKMGIKGNATCVLNYDNAIAYKVPESQPKAASAGGEKK 296

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYA----RRRHVSGGILID-- 351
            S   +  M   + ++ A M V GM+      V+   A  YA    + R +SG    D  
Sbjct: 297 SSVSGMAGM--FLMMNGARMGV-GMQGYAQSEVAYQNAALYANDRLQGRSLSGAKNPDGA 353

Query: 352 -QPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396
             P+           M RA  + A   A    LSF L  S  ++ +  E+ A   I   +
Sbjct: 354 ADPIIVFPDVRRMLMMSRAFTEGAR--ALHMWLSF-LGTSASKSTNPEEQMASGEISNLL 410

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K +   M       AM+C GG G+I E  + +  R+S  N I  G+     LD+L 
Sbjct: 411 TPVIKGYLTDMGFHCTNAAMQCFGGHGFIREHGMEQFVRDSRINQIYEGANGVQALDLLG 470

Query: 457 --LLEKGTNLFEQLFSTLEQDL 476
             +   G       F+ +++++
Sbjct: 471 RKVFANGMQGTNAFFNMIDEEI 492


>gi|116696491|ref|YP_842067.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113530990|emb|CAJ97337.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 385

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           I   LTE   G+D A++ ++ +   D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGAGASG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENVRVPAANIIGGVP-GVGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YAR R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYARERKQFGKPIGDFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK   +      ++A  TK +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E    R YR+
Sbjct: 349 IAEYKAERFYRD 360


>gi|229097074|ref|ZP_04228041.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|229103134|ref|ZP_04233821.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|229116036|ref|ZP_04245430.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228667431|gb|EEL22879.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228680323|gb|EEL34513.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228686360|gb|EEL40271.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 381

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           + G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|255590293|ref|XP_002535231.1| conserved hypothetical protein [Ricinus communis]
 gi|223523709|gb|EEF27157.1| conserved hypothetical protein [Ricinus communis]
          Length = 150

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 59/120 (49%)

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A+EC+GG+G+IE+ ++ R YR++P N I  GSGN + LDVL  L++     + L   L++
Sbjct: 1   ALECLGGAGFIEDSAMPRLYRQAPLNGIWEGSGNVICLDVLRTLQRDALAGQALRGLLKE 60

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
              S       +      L   D   AR L E +AL      L R     +AD F+  R 
Sbjct: 61  AAASDRALAEKVAAIETQLRNPDPAQARLLVEDLALVLQGKLLRRHSPPALADAFIATRI 120


>gi|147677911|ref|YP_001212126.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274008|dbj|BAF59757.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 376

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 38/264 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---GRVG- 254
             +TE   G+DI AI++  +K  D  Y L+G K F++   ++  +I+ A  +   G+ G 
Sbjct: 120 FAMTEPCAGSDIGAISTTARKKGDE-YVLNGTKCFITQGGLAAIYIVFASTDKSKGKKGL 178

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---- 309
             F+V R  E     G+   ++++K+G R++ TVEL        +L D+ V    +    
Sbjct: 179 SAFIVERWRE-----GISTGKVEDKMGIRASNTVEL--------ILQDVRVPASHLLGKE 225

Query: 310 -EDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            + MK+ +  LDS  + V+   V +A     E + + + R  +G  L  Q  +   IAD+
Sbjct: 226 GDGMKLAMKALDSGRLMVAAQAVGVARRALDECVKFVKARVDNGKPLASQQAVSFKIADM 285

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A   L +R A   D  +  S  +A       I K +C +MA  V  +AME +G  
Sbjct: 286 VAAVEAGKQLVYRGAMLKDTCQPYSRHSA-------IAKLFCTEMAIRVARDAMEIMGVY 338

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  E  + + +R++   SI  G+
Sbjct: 339 GYTRETYVEKIWRDARILSIYEGT 362


>gi|299530009|ref|ZP_07043436.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721989|gb|EFI62919.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 596

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDELKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ +   DG Y + G K F++     M+D  +  +LA+V G       +  F+V
Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ V   S   A+ YA+ R     V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGLQGLAVAERSYQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRM 347

Query: 359 IADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  +         +A   A ++  A+   +A+ R     +   M P+ K +  +M+  V 
Sbjct: 348 LMTMRASNEGCRAMATTAAAAYDAAHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|90416685|ref|ZP_01224615.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2207]
 gi|90331438|gb|EAS46674.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2207]
          Length = 603

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 56/356 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  ++  L T  T +  KD+  K+ S  +  T             + LTE   GT
Sbjct: 125 MYPGLSEGAVATLETSGTEQQKKDYLVKLISGVWSGT-------------MCLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++     DG Y ++G K F+S+   D       I+LA++    +G  G   F++
Sbjct: 172 DLGLMKTKAVPNDDGSYKVNGTKIFISAGEHDLTDNIVHIVLAKLPDAPKGTKGLSLFII 231

Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L  EDGS    NG+    +++K+G   N T  L F +   FL+G+ N     +    
Sbjct: 232 PKFLVAEDGSAGERNGVRCGSIEHKMGIHGNGTAVLNFDDAKAFLIGEPNQGLAAMFTYM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
            +  + +A    +    S   A  YAR     R +SG          +I+ P ++R +  
Sbjct: 292 NVARIGTASQGAAAAERSYQGAAKYARERLAMRSISGVKNPEGPADAIIEHPDVRRMLLT 351

Query: 362 ---IALDIAAATALSFRLANSFDEAKSRSE-EAAYARI--MAPITKYWCCKMAPAVIAEA 415
              IA    A    + + A+ +    S+ E +AA  R+    PI K +  ++        
Sbjct: 352 QRVIAEGGRAMVTYASQFADLYRGGNSQEERDAAEIRLGFCTPILKGFITELGVEAANHG 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468
           ++  GG GYI+E  + +  R+S   ++  G+     LD++    L++K    F+QL
Sbjct: 412 VQVFGGHGYIKEWGMEQILRDSRIATLYEGTTGIQALDLVGRKVLMDK----FKQL 463


>gi|49477755|ref|YP_036653.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218903676|ref|YP_002451510.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|228927603|ref|ZP_04090655.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|49329311|gb|AAT59957.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218538372|gb|ACK90770.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|228832083|gb|EEM77668.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 381

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 39/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEG------- 251
            GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  V G       
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTAVNGVEENGRK 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
           R+  F+VP   E     GL      +K+G R++ T E+           +LGD+N     
Sbjct: 181 RISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVN----- 230

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + +   ++  +AD+
Sbjct: 231 -KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNFQAIQFKLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++  A  L  + A   D  K   +EAA A++ A        + A  +  +A++  GG 
Sbjct: 290 ATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIANQAVQIHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY+ E  + RH R+  A  + +G G + +
Sbjct: 343 GYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|304312544|ref|YP_003812142.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798277|emb|CBL46499.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 599

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+    M+D    I+LA++    +G 
Sbjct: 165 LTEPHCGTDLGILRTKAEPNADGSYNITGTKIFISAGDHDMADNIVHIVLARLPDAPKGT 224

Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+  +  DGS    NG+    +++K+G +++AT  L F    GFL+G  N  
Sbjct: 225 KGISLFIVPKNHVNADGSIGDRNGVVCGSIEHKMGIKASATCVLNFEGARGFLIGPPNRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 285 LNCMFTFMNTARVGTAVQGIAAAELSFQGALTYAKDRLAMRSLSGPKFPEKEADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407
            ++R +           AL + LA   D   E    +   A   +MA   PI K +C + 
Sbjct: 345 DVRRMLLTQKAFAEGGRALIYFLAQQIDLVEEGADETSRQAADDLMAFLTPIAKAFCTET 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++   ++  G+     +D+L
Sbjct: 405 GLESANHGVQVYGGHGFIREWGMEQIVRDTRIATLYEGTTGVQAIDLL 452


>gi|229076818|ref|ZP_04209728.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|228706307|gb|EEL58570.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 371

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + + DG  Y +SG K ++++      I++  
Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 160

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           + G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 161 INGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 323 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359


>gi|330938539|gb|EGH42122.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 505

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 30  MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 76

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 77  DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 136

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 137 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 196

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 197 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 256

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +      A A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 257 MKAFAEGARAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 316

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 317 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 368


>gi|298480751|ref|ZP_06998947.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22]
 gi|298273185|gb|EFI14750.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22]
          Length = 568

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 50/374 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
            P  H  + P+I   E               + + LTE   G+D+ ++  +      DG 
Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +R++NK+G   +
Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339
            T EL + N    L GD  +  G ++   ++  ++ A + ++   V L++A +     YA
Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385
           + R   G  +I+ P +   +A +   + A  AL ++ +   D  K+              
Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375

Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           R E+  YA++     P+ K    + A     + ++  GGSG++ E +  R YR++   SI
Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435

Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
             G+     +  +  +  G+ +     FE +  + E + L S  KK+      S +  KE
Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEASTNAVKE 495

Query: 497 --DKGLARFLTEKI 508
             D+ L  F   K+
Sbjct: 496 VQDQELLDFTARKL 509


>gi|297617060|ref|YP_003702219.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144897|gb|ADI01654.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 33/284 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K        +TE   GTD+ A T+    + DG  Y ++G K F S+ P++D FI+ A
Sbjct: 113 PLAKGEKIGAFAITEPGAGTDVGAATTTA--VLDGDEYVINGTKTFTSNGPVADTFIIFA 170

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTF 295
             +   G      F+VP+        GL   +   K+G R++ T E+          N  
Sbjct: 171 WTDKSQGPKGMSAFIVPK-----EAPGLKVGQHFLKMGIRASQTSEIILKDCRVPKENLL 225

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G     L ++    ++ +I I    A  +V  M+ +L E+I Y+++R   G  +     +
Sbjct: 226 GKEGEGLKIAMASFDNGRIGI----AAQAVGIMQAALDESISYSKQRVQFGKPIARHQAI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+A D+AAA  L++  A   ++    S+EAA A++ A        + A    ++A
Sbjct: 282 QWMIADMATDLAAARFLTYYAAWLKEQGLPYSKEAAMAKVFA-------AEAATKHTSKA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458
           ++  GG GY +   + R  R++    I  G+  A  + +  NLL
Sbjct: 335 VQIHGGYGYCKGFKVERLMRDAKITEIYEGTSEAQRMVIAGNLL 378


>gi|253583423|ref|ZP_04860621.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251833995|gb|EES62558.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 636

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F+++   ++ +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDYYILNGGKIFITNADKAETYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q V+   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIASQALGIAQGAFENALEYAKEREQFGKPIAFQQVISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A    E K   E  A    MA   K +   +   ++ EA++  GG+
Sbjct: 289 ATKLRAARFLVYSAA----ELKENHENYAMESAMA---KQYASDVCLEIVNEALQIFGGT 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|55377709|ref|YP_135559.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230434|gb|AAV45853.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 375

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 50/305 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + S +A   +  V  DW P++        +  P+          L+E + G++   +++ 
Sbjct: 91  ATSCIAQFGSKAVQDDWLPEMV-------DGRPVG------AFALSEPQAGSNPREMSTT 137

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCY 272
            ++  D  Y ++G K W  +   S   I+ A+ +      +  FLVP+  E     GL  
Sbjct: 138 ARRDGDE-YVINGEKQWITNGKRSGVVIVFAKADPDDPDSITQFLVPKDTE-----GLTV 191

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKILIYLDSAI--MSVS 326
              ++K+G R++ T  L+F    G  + +         G    + IL     AI   +V 
Sbjct: 192 GEKEDKLGLRASDTTPLQFD---GVRVPERYQLTEEGKGLAAALSILTTGRVAIAAQAVG 248

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381
             + +L EA+ YA+ R        DQP+     ++  +AD+A ++ AA  L++  A   +
Sbjct: 249 LAQSALDEALDYAKERE-----QFDQPISEFQTIQHKLADMATNVQAARLLTWNAAQQLE 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R E+A   R  A + KY+  + A  V  EA++  GG GY  +  + R YR++   +
Sbjct: 304 ----RGEDA---RAAASMAKYFASETAVEVANEAIQIHGGYGYTTDYPVERFYRDAKVTT 356

Query: 442 ILLGS 446
           I  G+
Sbjct: 357 IYEGT 361


>gi|316932503|ref|YP_004107485.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600217|gb|ADU42752.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 593

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 100/457 (21%), Positives = 187/457 (40%), Gaps = 60/457 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114
            G+Y    TAQ L     + +  L      G++        KV   P W    +R I  G
Sbjct: 29  FGDYDGEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +       F       A       ++  + +  G  + P +T +++ AL T  +  + +
Sbjct: 89  WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDELKQ 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T    MQ         LTE + G+D+ A+ ++ ++   G Y + G K
Sbjct: 147 IYLSKLVSGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAEGGSYRIFGSK 193

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275
            F++     M+D  +           A  +G +  FLVP+ L       G+ N +    +
Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVGADGTLGARNDIYPSGV 252

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  ++ T  +   +     G+L+G+ N     +  M     L   +  V     + 
Sbjct: 253 EHKLGIHASPTCTMTMGDNGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLA 377
            +A+ YA+ R     I         +I  P +KR      A+   A  I  +TA++  +A
Sbjct: 313 QQALAYAQERKQGRAIGSTGSGSDPIIKHPDVKRTLLTMRALTGAARTICYSTAVALDIA 372

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + K ++  AA   ++ PI K +   +   V +  ++  GG G+IEE   A+HYR++
Sbjct: 373 ARSTDPKVKAAAAARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
               I  G+     +D++   + G N    +F+ L++
Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGNNGGASVFALLDE 468


>gi|228933834|ref|ZP_04096680.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228825906|gb|EEM71693.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 381

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM         GLTE   G+D     +Q + I DG  Y +SG K ++++      I++  
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           V G       R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++     L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELTRNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|167644104|ref|YP_001681767.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346534|gb|ABZ69269.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 596

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 52/367 (14%)

Query: 152 MSPSVTSASMVALMTT-PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +   +  A+ T      KD + PK+ S E+  T             + LTE   GT
Sbjct: 125 MYPGLAHGAYSAIHTGGSDQQKDLYLPKMVSGEWTGT-------------MNLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++    +DG Y ++G K ++S+    M+D  +  +LA++EG       +  F+V
Sbjct: 172 DLGLLRTKAVPEADGSYRITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIV 231

Query: 259 PRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG----P 308
           P+ L  EDGS      G+    L+ K+G   NAT  +++ +  G+L+G+ N         
Sbjct: 232 PKFLPKEDGSVGPRNEGVKCVGLEEKMGIHGNATCVMQYEDAKGWLIGEENSGLKLMFVM 291

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIA 360
           + + ++ + L     + +  + ++A A    + R ++G          +I  P ++R + 
Sbjct: 292 MNEARLGVGLQGIAQAEAAYQAAVAFAKDRLQGRSLTGPKNPEGPADPIIVHPDVRRMLL 351

Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +    I         TAL   LA+   +  +R++   Y  +M P+ K +       + ++
Sbjct: 352 ESKALIEGGRAFLFWTALHGDLAHQHPDEATRAKAEDYMGLMTPVLKGYLTDKGFKICSD 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
           AM+  GGSG+ E    +++ R+     I  G+     LD++   L  KG       F  +
Sbjct: 412 AMQVHGGSGFTEHFPASQYLRDVRIALIYEGTNGIQALDLVGRKLASKGGRAVMTFFQEV 471

Query: 473 EQDLGSS 479
           +Q +G +
Sbjct: 472 DQFIGEN 478


>gi|308475057|ref|XP_003099748.1| CRE-ACDH-3 protein [Caenorhabditis remanei]
 gi|308266403|gb|EFP10356.1| CRE-ACDH-3 protein [Caenorhabditis remanei]
          Length = 424

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 33/279 (11%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           AIG   L+E   G+D  A+ +  +K  D  + +SG K W  ++  +  F++ A  E   G
Sbjct: 156 AIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANAEPGKG 214

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
                CFLV R  E     G+   + ++K+G R+++T  + F N       +LG+    T
Sbjct: 215 YKGITCFLVDRNQE-----GVSVGKKEDKLGIRASSTCSVHFDNVRVHKSAILGEYGKGT 269

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
                 K  I  L++  + +    + LA+      I Y ++R   G  LID   M+  I 
Sbjct: 270 ----SYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGKRLIDFQGMQHQIG 325

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            + ++I AA  L +  A   +       EAA A++ A        ++A    +  +E +G
Sbjct: 326 QVRMEIEAARLLVYNAARMKENGIPFVREAAMAKLFA-------SQVATTATSRCVEWLG 378

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G G+ +E  + + YR+S   +I  G+ N  +  +  L++
Sbjct: 379 GVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 417


>gi|229158902|ref|ZP_04286959.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228624513|gb|EEK81283.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|30023372|ref|NP_835003.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|218232901|ref|YP_002370118.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|228961605|ref|ZP_04123214.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051012|ref|ZP_04194560.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229112755|ref|ZP_04242287.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130590|ref|ZP_04259546.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229147881|ref|ZP_04276222.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|296505765|ref|YP_003667465.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|29898933|gb|AAP12204.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|218160858|gb|ACK60850.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|228635531|gb|EEK92020.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228652929|gb|EEL08811.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228670589|gb|EEL25901.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228722321|gb|EEL73718.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228798087|gb|EEM45091.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296326817|gb|ADH09745.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis BMB171]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMRVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|294501895|ref|YP_003565595.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351832|gb|ADE72161.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 375

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 127/260 (48%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++ ++  D  Y L+G K F+++   +D +I+ A+     G   +  
Sbjct: 123 LTEPSAGSDAASLKTKAERKGDH-YLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312
            + + +  G    + ++K+G   + TV+L F N        + V   PVE+         
Sbjct: 182 FIVEKTMEGFSVGKDEHKMGLHGSRTVQLHFEN--------MQV---PVENRLGEEGEGF 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +I +  L++  + ++   V +AE     A +YA  R+  G +++ Q  +   +AD+   +
Sbjct: 231 RIAMANLNAGRIGIAAQAVGIAEGALTAAKNYANERYQFGKLILSQQGIAFKLADMETAV 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L +R A  +D+     +EA+ A++ A  T       A  V  +A++ +GG GY++
Sbjct: 291 ESAKLLMYRAAFLYDQKLPCKKEASMAKLFASQT-------AMNVAIDAIQVLGGYGYMK 343

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R++R++    I  G+
Sbjct: 344 DYPVERYFRDAKVCEIYEGT 363


>gi|241766996|ref|ZP_04764787.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241362494|gb|EER58407.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 385

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP    +W PK+ + E             V     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQAEWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKNGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K +++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPDDKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++ +  + V+  R+ L
Sbjct: 203 GQRGAHTCDVIFDNVRVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 RDALAYALDRKQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDDGHNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GG+GY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356


>gi|218906520|ref|YP_002454354.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|218536716|gb|ACK89114.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|49480422|ref|YP_039334.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|49331978|gb|AAT62624.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR RH  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|302341475|ref|YP_003806004.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
 gi|301638088|gb|ADK83410.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
          Length = 386

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258
           LG+TE   G+D+AAI ++  +  D  Y ++G K F+++     FI LA + E   G   +
Sbjct: 125 LGVTEPGAGSDVAAIRAKASRQGDH-YLINGAKTFITNGADGHFITLACKTEPGAGARGI 183

Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             ++ D  +P   C +RL+ K+G  ++ T EL F +       L+G  N     +     
Sbjct: 184 SLIVVDLDAPGVSCTRRLE-KMGWHASDTAELTFEDVRAPLANLVGQENKGFYYIMQAFQ 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L  A M +   ++ L  A+ Y   R+  G  L +   +   +A+++    AA  L++
Sbjct: 243 LERLACAAMGLGLAQLCLEHAVKYMGERNAFGAPLSNLQALAHRLAELSARQEAARQLTY 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A  +        + + A+++A       C++A  V  E ++  GG G +EE  +AR  
Sbjct: 303 HAAWLYQNDLPCVAQCSMAKLLA-------CELAKRVADECLQFFGGYGLMEEYPMARLL 355

Query: 435 RESPANSILLGSGNAM 450
           R+S   +I+ G+   M
Sbjct: 356 RDSRLGTIVAGTSEVM 371


>gi|289645155|ref|ZP_06477173.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505032|gb|EFD26112.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 382

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 26/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           L+E   G+D +A+ ++    +DG + L+G K W      +D + + A+        + CF
Sbjct: 127 LSETHAGSDPSAMRTRATATTDGGFLLAGTKAWVTHGGAADFYTVFARTSDDRSSGISCF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           +      D + +GL  Q  + K+G R + T  + FS+    L  D  V   P + + I L
Sbjct: 187 VA-----DATSDGLTTQPPERKMGLRGSPTAIVNFSDVR--LPADRLVGQ-PGQGLSIAL 238

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   V LA+     A+ YAR+R   G  +I+   +   +AD+A  + +A 
Sbjct: 239 SALDSGRLGIAATAVGLAQRALDDAVAYARQRTSFGKPIIEHQGLGFLLADMAAAVESAR 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A +   A   D     S +A+ A+++A          A  V  +A++  GG+GY  +  +
Sbjct: 299 ATTLAAARRRDAGLPFSRQASIAKLVA-------TDAAMKVTEDAVQVFGGAGYTHDYPV 351

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I  G+
Sbjct: 352 ERYMREAKVMQIFEGT 367


>gi|254427489|ref|ZP_05041196.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193658|gb|EDX88617.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 385

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 27/296 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP + + +      R+Y     AP     +   + ++E   G+D+AA+ +   K  D 
Sbjct: 93  MATPAIAR-FGSDELRRDY----LAPAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDD 147

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            Y ++G K W  +SP +D F +LA              +VP+        G+   +  NK
Sbjct: 148 -YLINGTKMWITNSPSADFFCLLANTSDAKPHVNKSLIVVPK-----DAAGITVDKPLNK 201

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G RS+ T ++ F N       L+G   +             L +A  S+ GM   + E 
Sbjct: 202 LGMRSSETAQVFFDNVRVPQRNLIGQEGMGFMMQMMQFQEERLFAAANSLKGMEHVIDET 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA+ R V G  LID   +   +A++  ++ A  AL+++    +   K   +       
Sbjct: 262 IAYAKDRKVFGMSLIDNQSVHFRLAELQTEVEALRALTYQACEMYVNGKDVLQ------- 314

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A + K    +++  V    ++  GG+G++ E    + YR+    SI  G+   M+
Sbjct: 315 LASMAKLKVGRLSREVADSCLQYWGGNGFMWENPAGQLYRDGRLGSIGGGADEVML 370


>gi|332142140|ref|YP_004427878.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552162|gb|AEA98880.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 600

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 150/360 (41%), Gaps = 51/360 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++    +  +   + PK+ + ++  T             + LTE   G+ +A I
Sbjct: 130 TAAAANVIKHFASSDIKNAFLPKMLTGDFTGT-------------MALTEPHAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261
            +  +   DG Y + G K ++S     +SD  +  +LA++ G       +  F VP  RL
Sbjct: 177 RTSAKPQDDGTYRIKGSKIYISGGEHELSDNIVHLVLAKIPGGPAGVKGISLFAVPKYRL 236

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311
             DG+P   N +    L +K+G R   +  L F    +  G+L+G+    L      + +
Sbjct: 237 DADGNPDVRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLIGEPHQGLRYMFMMMNE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-------------VMKRA 358
            +I +   +A++   G R SL  A    + R        D P             + ++A
Sbjct: 297 ARIGVGYGAAMIGYRGYRYSLEYAKDRTQGRAAPNLAPEDDPSPIINHGDVRRMLLAQKA 356

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
             +  + +    ++      +  +++ R+E +    ++ P+ K W  +  P     A++ 
Sbjct: 357 YCEGGMSLCLYGSMLIDKMETETDSEKRTELSQLLDLLTPVFKAWPSEFGPKANDLAIQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
           +GG+GY  E  + + +R++  N I  G+     LD+L   L +      E L S +  D+
Sbjct: 417 LGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKLWQHDGKGLEALLSRVTGDM 476


>gi|325918170|ref|ZP_08180321.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325918365|ref|ZP_08180498.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535420|gb|EGD07283.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535615|gb|EGD07460.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 372

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +  
Sbjct: 115 LTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGITA 174

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + D    G    + + K+G R++AT E+EF++        L V     E  K  +  LD
Sbjct: 175 FMVDTDKPGFHRGKTEPKLGIRASATCEIEFADYIAHADDVLGVEG---EGFKTAMSVLD 231

Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L+ 
Sbjct: 232 AGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLLTL 291

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A    + K    EAA A++ A     W       +  +A++  GG GY +E  + R++
Sbjct: 292 RAAWLKGQGKKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLERYF 344

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 345 RDAKITEIYEGT 356


>gi|126665781|ref|ZP_01736762.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
 gi|126629715|gb|EBA00332.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
          Length = 600

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 44/295 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE + G+ +  + ++ +   DG Y L G+K ++S     +S+  I  +LA++ G     
Sbjct: 164 LTEPQAGSSLGDLRTRAEPQPDGTYRLFGNKIYISGGDHELSENIIHMVLARLPGAPLGV 223

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302
             +  FLVP++L  EDGS    N +    L +K+G R   +  L F       G+L+G+ 
Sbjct: 224 KGISLFLVPKILVNEDGSLGERNDVALAGLIHKMGYRGTTSTMLNFGEKDGAAGYLVGEA 283

Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------- 348
           N     +  M    +I + L S ++  +G       A+ YAR R     I          
Sbjct: 284 NNGLAAMFHMMNEARIGVGLGSVMLGYTG----YLHALEYARERRQGRPIGEKDPSAPQV 339

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITK 401
            LI  P ++R +      +    AL  + A   DE K       R+  A    ++ P+ K
Sbjct: 340 PLIRHPDIRRMLLAQKSYVEGGLALCLQGAMLVDEKKLAATDDQRNLAAGLLDLLTPVIK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            W  +      + A++  GG GY  E  + + YR++  N I  G+     +D+L 
Sbjct: 400 SWPSRYCLEANSLAIQVHGGYGYTREYPVEQFYRDNRLNQIHEGTHGIQGIDLLG 454


>gi|229072808|ref|ZP_04206007.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228710299|gb|EEL62274.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|153808413|ref|ZP_01961081.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185]
 gi|149128735|gb|EDM19952.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185]
          Length = 568

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 36/343 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      DG + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTARYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ +     FE +
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFEAI 466

Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
             + E + L S  KK+      S +  KE  D+ L  F   ++
Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEAQDQELLDFTARRL 509


>gi|111022859|ref|YP_705831.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822389|gb|ABG97673.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 464

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 54/318 (16%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    TP     WAP+ F    +P N   ++  ++ I    +E  GG+D+  + +   
Sbjct: 96  SSIGQAATPEQMLRWAPECFG---EPGN---LKLAALCI----SEPEGGSDVRNLRTTAT 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  ++D  ++ A V+  +G      F+VP     GSP G+   
Sbjct: 146 RDGD-EWVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVP----GGSP-GIELV 199

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN---------------VSTG-PVEDMKI 314
           R  +K+G R++ T EL+F         LLG  +               V+TG P      
Sbjct: 200 RKLDKLGCRASHTAELKFHQVRVPADHLLGGDDKLQNRMRKAREVQEEVATGAPQRKSAT 259

Query: 315 LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   +      A  ++   R +L  A  YA RR   GG +ID   +   +AD+A  I AA
Sbjct: 260 LGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLATQIDAA 319

Query: 370 TALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++R +  +    + R  E + A++ A        ++A      A++ +GG GYI + 
Sbjct: 320 RLLTWRASWMAAAGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWGYISDH 372

Query: 429 SIARHYRESPANSILLGS 446
            + + YR++   +I  G+
Sbjct: 373 PVEKWYRDAKLYTIFEGT 390


>gi|326799657|ref|YP_004317476.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326550421|gb|ADZ78806.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 390

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 47/288 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  GLTE   G+D   + +      D  Y ++G K
Sbjct: 116 WLPKLASGEW--------------IGAWGLTEANTGSDALNMLTTAVLEGDH-YVINGTK 160

Query: 233 -WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W       D  +++A+       G +  F++    E G+P G  + + +NK+G R++ T
Sbjct: 161 NWITHGKSGDIAVVMARTGNKGESGGISAFMI----EKGTP-GFMHGKKENKLGMRASET 215

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            EL   N       LLG      G  + MK+L   D   +S++ + + +A+     AI Y
Sbjct: 216 TELILDNVRVPKSNLLG--LEGEGFKQAMKVL---DGGRISIAALALGIAKGALDAAITY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +++RH  G  + +   +   IAD+A ++ AA  L  R A    E K++      A  MA 
Sbjct: 271 SQQRHQFGQPIANFQAISFKIADMATEVEAAELLIQRAA----EWKNKGIPVTKASAMA- 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             KY+  ++A  V  EA++  GG GY ++  + + YR++   +I  G+
Sbjct: 326 --KYYASEVAVKVATEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGEGT 371


>gi|258514955|ref|YP_003191177.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778660|gb|ACV62554.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 386

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC-FL 257
            GLTE   G+D  A  +      D  Y L+G K F+++   +D +++ A  +   G   +
Sbjct: 124 FGLTEPAAGSDAGATKTTAVLEGDN-YVLNGTKIFITNGYYADIYVITAMTDKSKGLKGI 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
              ++E G+P G  + + + K+G R++AT EL F N     +   N+     E  K+ + 
Sbjct: 183 TAFIVEKGTP-GFTFGKKEEKMGIRASATYELVFDNC---KIPKENMLGKEGEGFKVAMA 238

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   V +A+     A++YA  R   G  +  Q  +   +AD+A+ I A+  
Sbjct: 239 TLDGGRIGIASQAVGIAQGAYDYALNYANTREQFGKPISAQQAIAFKLADMAMKIEASRL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ + A   D    R     Y  + + + K +    A  V  EA++  GG+GY  E  + 
Sbjct: 299 LTLKAAYMKDAGDKR-----YG-LYSAMAKCFAGDTAMEVTTEAVQICGGNGYTREYPVE 352

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 353 RMMRDAKITQIYEGT 367


>gi|306821130|ref|ZP_07454746.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550823|gb|EFM38798.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 646

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 18/268 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +  +   D  Y L+G K F+++   +D +++ A 
Sbjct: 115 PLAKGEKIGAFGLTEPEAGSDAGGTQTTAELDGD-YYILNGGKIFITNAGKADIYVVFAV 173

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G  +    +K+G RS+ T EL F N     +   N+    
Sbjct: 174 TTPGIGTKGISAFIVEKGWDGFSFSDHYDKLGIRSSQTCELIFDNV---KVPKENLLGKE 230

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  +I +  LD   + ++   + +A+     A++YA++R   G  +  Q  ++   AD+
Sbjct: 231 GQGFRIAMQTLDGGRIGIASQALGIAQGAYESALNYAKQRVQFGKPIAFQQAIEFKFADM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A+  +  +  S EAA A       K +   +A  V  +A++  GGS
Sbjct: 291 ATKLRAARLLIYSAADLKEAHEDYSMEAAMA-------KKYASDIALEVCNDALQIYGGS 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY++   + R YR++   +I  G+   M
Sbjct: 344 GYMKGMDVERFYRDAKITTIYEGTNEIM 371


>gi|322435753|ref|YP_004217965.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163480|gb|ADW69185.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 608

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 30/276 (10%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--- 249
           ++     L+E   G+D     ++     DG  Y L+G K W  +   +D + + A+    
Sbjct: 152 TIVAAYALSESTSGSDAVNARTRAVLSEDGQHYILNGEKMWITNGGFADLYTVFAKCLIP 211

Query: 250 ------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                 E ++  FL+ R    G+P G      ++K+G R ++T  L  ++       LLG
Sbjct: 212 SGKGAGEEKLTAFLIER----GTP-GFTNGPEEHKLGIRGSSTTPLILNDCKIPAANLLG 266

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           ++        ++  +        +V   R +L  AI YAR R   G  + +  +++  +A
Sbjct: 267 EVGKGHHIAFNILNVGRYKLGNAAVGAARHTLGNAIRYARDRKAFGKSISEFGLIQEKLA 326

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEA----------AYARIMAPITKYWCCKMAPA 410
           D+A+ I    AL +R     D+A +++E++          +YA +   I K W  +M   
Sbjct: 327 DMAVGIYVGEALCYRTVGLIDQALAQTEKSDTPAIQRAIESYA-VECSIVKVWASEMLDF 385

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V+ E ++   G GY+EE    R YR++  N I  G+
Sbjct: 386 VVDETVQIFAGYGYVEEFPAERAYRDARINRIFEGT 421


>gi|226362475|ref|YP_002780253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240960|dbj|BAH51308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 26/255 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+  +    +DG Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALACK-AAATDGGYVVNGAKAWITHGGIADFYNLFARTGEGSKGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP+  E     GL + + + K+G  +  T    + + F      L       + ++I   
Sbjct: 186 VPKDTE-----GLTFGKPEEKMGLHAVPTTSAHYDDAFVPTERRLGAEG---QGLQIAFS 237

Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++ + V LA     EA+ YA+ R   G  +ID   +   +AD+A  + +A  
Sbjct: 238 ALDSGRLGIAAVAVGLAQAALDEAVAYAQERTTFGKKIIDHQGLGFLLADMAAAVDSAR- 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D A+ R     Y+R  A + K      A  V  +A++ +GG GY  +  + 
Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVE 350

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I  G+
Sbjct: 351 RYMREAKITQIFEGT 365


>gi|255690222|ref|ZP_05413897.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260624241|gb|EEX47112.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 568

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 50/374 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
            P  H  + P+I   E               + + LTE   G+D+ ++  +      DG 
Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +R++NK+G   +
Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339
            T EL + N    L GD  +  G ++   ++  ++ A + ++   V L++A +     YA
Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385
           + R   G  +I+ P +   +A +   + A  AL ++ +   D  K+              
Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375

Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           R E+  YA++     P+ K    + A     + ++  GGSG++ E +  R YR++   SI
Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435

Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
             G+     +  +  +  G+ +     FE +  + E + L S  KK+      S +  KE
Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEASTNAVKE 495

Query: 497 --DKGLARFLTEKI 508
             D+ L  F   K+
Sbjct: 496 VQDQELLDFTARKL 509


>gi|118587976|ref|ZP_01545386.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118439598|gb|EAV46229.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 28/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ +  +   D  Y L+G K F+S   +SD + ++ +  G     V C 
Sbjct: 124 LTEPGSGSDAASLRTSARDDGDH-YILNGSKAFISGGGVSDLYAVMVRTGGEGPSGVSCL 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LV    E G+P GL +   + K+G +S  T ++ F       SN  G       ++   +
Sbjct: 183 LV----EKGTP-GLSFGANEVKLGWKSQPTAQVNFQDCRVPKSNLIGSEGQGFKIAMAAL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I       S+   +  L  A+ Y + R   G  + D   ++  +AD+A ++ AA
Sbjct: 238 DGGRLNI----GACSMGAAQACLDHALAYVQERKQFGRPIADFQALQFRLADMATELEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A++ D AKS       A  +A + K         V+ EA++  GG GY+ +  
Sbjct: 294 RLLLHKAASAVD-AKSHD-----ATKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYP 347

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I R++R+   + IL G+   M L +   L K
Sbjct: 348 IERYFRDVRVHQILEGTNEIMRLIIARQLLK 378


>gi|315503042|ref|YP_004081929.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409661|gb|ADU07778.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 377

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 66/309 (21%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    + W P   S E             +   + ++E   G+D+A IT+   +  D 
Sbjct: 102 LTTEEQKQRWLPGFCSGE-------------IVTAIAMSEPGAGSDLAGITTTAVRDGDD 148

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKN--K 278
            + L+G K F+S+  ++D  +++A+ +   GR G  L+  ++E G P    ++R +N  K
Sbjct: 149 -WVLNGQKTFISNGILADLVVVVARTDPGAGRRGISLL--VVERGMPG---FERGRNLDK 202

Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G ++  T EL FS+               F +L+ +L     P+E + I      A+ +
Sbjct: 203 LGQKAQDTAELFFSDVRVPAANLLGAEGEGFAYLMRNL-----PLERLSI------AVAA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD--IAAATALSFRLANSF-D 381
           ++G     A+ + Y ++R   G          R I     +  + A  A   RL   F D
Sbjct: 252 LAGAETVFAQTLDYCKQRQAFG----------RPIGSFQHNRFVLAELATELRLGRVFVD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 +  A    MA   K+WC ++   V+   ++  GG GY+ E  +AR Y ++   +
Sbjct: 302 NCLVAPDLTAETAAMA---KWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLDARVQT 358

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 359 IYGGTTEIM 367


>gi|260903040|ref|ZP_05911435.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308108326|gb|EFO45866.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
          Length = 384

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 33/279 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP   E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465
             + RH+R+   + IL G+   M L +   LL +G  L 
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384


>gi|229105933|ref|ZP_04236557.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228677507|gb|EEL31760.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 379

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
                        + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TNPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|197105827|ref|YP_002131204.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479247|gb|ACG78775.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 374

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 41/259 (15%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEG 251
           AIG   LTE   G+D AA+ ++  ++  G Y L+G K F++S     ++  F +     G
Sbjct: 116 AIGAFALTEADAGSDAAAVRTRATRVPGG-YRLNGAKQFITSGKIAKLAIVFAVTDPDAG 174

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297
           + G   FLVP         G    ++++K+G  ++ T  L F + F            G+
Sbjct: 175 KRGLSAFLVPT-----DRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGY 229

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +   N+ TG     +I I    A  SV   + +L  A+ YAR+R   G  +I+   +  
Sbjct: 230 GIALSNLETG-----RIGI----AAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGF 280

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A   D  +    +A+ A++ A  T       A AV++ A++
Sbjct: 281 RLADLATRLEAARQLVLSAAALKDAGEPALRQASMAKLFASET-------AEAVVSGAIQ 333

Query: 418 CIGGSGYIEERSIARHYRE 436
            +GG GY+EE  +A+ YR+
Sbjct: 334 TLGGYGYLEEFGLAKIYRD 352


>gi|212697486|ref|ZP_03305614.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675485|gb|EEB35092.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 400

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD +   +   K+    Y L+G K F+++   ++ +I+ A  +   G   +
Sbjct: 144 FALTEPNAGTDASGQQTVA-KLDGDEYVLNGTKIFITNGGYAETYIVFAMTDKSKGNHGI 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +  L+NK+G   ++T+EL F +     +   N+     +  KI +  
Sbjct: 203 SAFIVEKGTKGFDFGTLENKMGINGSSTMELIFQDC---RIPKENLLGEEGKGFKIAMAT 259

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +AE     A+ Y++ R   G  L      +  +A++A++I AA  L
Sbjct: 260 LDGGRIGIAAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARHL 319

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A+  D  ++ S  AA A++ A  T       A  V   A++ +GG GYI+E  + R
Sbjct: 320 VYKAASLKDAGENYSVAAAMAKLKASRT-------ASYVANRAVQILGGYGYIKEYDVER 372

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R++    I  G+   M++ V
Sbjct: 373 MMRDAKITEIYEGTSEVMLMVV 394


>gi|84495592|ref|ZP_00994711.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84385085|gb|EAQ00965.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 391

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 22/342 (6%)

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F   V  Q   I  A L   A +E+G   S  + +A     + TP +       +     
Sbjct: 55  FPESVGGQGGSIVDANLVTEAIIESGG--SGGLIAALFTHGIATPHIVSSGDAHLIDTYV 112

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
            PT    +  +     L +TE  GG+D+A I +  ++  D  + ++G K F++S +   F
Sbjct: 113 RPTLDGQLIGS-----LAVTEPSGGSDVAGILTTARRDGDD-WIVNGAKTFITSGVRADF 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           +  A   G  G   +  L+ D    GL   R   K+G   + T EL F +       ++G
Sbjct: 167 LTTAVRTGDPGHGGISLLVIDKDSPGLTVSRPLRKLGWHCSDTAELSFDDVRVPGHHIVG 226

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            ++     + +  +   L+ A  + +    + A A+ YA  RH  G  L  + V++  + 
Sbjct: 227 QVHSGFALIMEQFVSERLNLATQAHATASRATALAVAYAGTRHTFGRSLSQRQVIRHLLV 286

Query: 361 DIALDIAA-------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           D+A   AA       A   +  LA S D   +  E+   A + A   K    + A  V++
Sbjct: 287 DMARRTAAARALTRQAITYAAELAESSDAPDA--EQRRKATLEAVFAKNTAVEAAERVVS 344

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A++  GG GY+ E  + RHYR+     + +G G   VL+ L
Sbjct: 345 DAVQIFGGMGYMRESEVERHYRD--VRILGIGGGATEVLNDL 384


>gi|218777966|ref|YP_002429284.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759350|gb|ACL01816.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 606

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 67/351 (19%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ M+    T      + PKI + E+  T             + LTE   GTD+ A+T+ 
Sbjct: 135 TSDMIEKYGTQEQKDLYIPKITTGEWGGT-------------MLLTEPDAGTDVGALTTT 181

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-- 264
             K  DG Y L+G+K F+++   D        +LA++EG       +  F+VP+   +  
Sbjct: 182 AVKNDDGTYSLTGNKIFITNGEHDLCENIIHPVLARIEGDPAGTKGISIFIVPKYFVNPD 241

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K G +++AT ++   +     GFLLG         E MK++  +
Sbjct: 242 GSLGDRNDILCTGVEHKHGIKASATCQMSMGSKGKCIGFLLGK------EREGMKVMFNM 295

Query: 319 DSAIMSVSGMR------VSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIA 360
            +     +G++       S  +A++YAR R     I            +I+ P ++R + 
Sbjct: 296 MNGARMATGLQALAYASASYLDALNYARDRIQGRSIDDMANHGAPPVAIINHPDVRRNLL 355

Query: 361 DIALDIAA-------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +         ++ L+ + A + DE + +     Y  +M P+ K +   +   V  
Sbjct: 356 WMKSYVCGFRSFFQYSSMLATKAAMAEDEEERKLNNGLY-ELMTPLIKAYLSDLGYEVCV 414

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG 461
           + ++  GG G+ ++    ++ R+    SI  G+     +D+L     +EKG
Sbjct: 415 QGIQVYGGVGFCQDFLAEQYARDCKITSIYEGTSGIQSMDLLGRKLGMEKG 465


>gi|77461387|ref|YP_350894.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385390|gb|ABA76903.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 592

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ + +     G+ N      +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVNADGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   AI YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   + A   R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+   F 
Sbjct: 406 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465

Query: 467 QLF--------STLEQDLGSSGKKVITILRDSISLCKE 496
           +LF        +T   DLG   K     L D++    E
Sbjct: 466 KLFADEIRHFTATASADLGEFTKP----LNDAVDTLDE 499


>gi|209965427|ref|YP_002298342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958893|gb|ACI99529.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 599

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 44/298 (14%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI- 244
           APM        + L+E + G+ +A I +      DG Y ++G K ++S+    +S+  + 
Sbjct: 151 APMLTGRFFGTMALSEPQAGSSLADIRTSAAPEPDGSYSITGTKQWISAGEHELSENIVH 210

Query: 245 -MLAQVEGR------VGCFLVP--RLLEDGSPNGLCYQRLK---NKIGNRSNATVELEFS 292
            +LA+++G       +  F+VP  R+ EDGS  G    RL    +K+G R   +  L F 
Sbjct: 211 MVLARIKGAPAGVKGISLFIVPRFRVAEDGSLQGDNDVRLVSLLHKMGYRGTTSTILSFG 270

Query: 293 NTF---GFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                 GFL+G  N     +  M    +I + L +A +  +G R SL     YAR R   
Sbjct: 271 EAGRCQGFLVGQENQGLACMFHMMNEARIGVGLGAAALGYAGFRYSL----DYARTRPQG 326

Query: 346 GGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
                  P            +KR +         A AL    A   DE K+  E AA  R
Sbjct: 327 RPPEARDPASPMIPIAGHADVKRMLLQQKAASEGALALCLYCARLVDEQKTAPEPAARER 386

Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 I+ P+ K W  +        A++ +GG GY  +  + ++YR++  N I  G+
Sbjct: 387 AGLLLDILTPVAKSWPSEHCLEANKWAIQILGGYGYTRDYPVEQYYRDNRLNPIHEGT 444


>gi|83643932|ref|YP_432367.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83631975|gb|ABC27942.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 376

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 15/280 (5%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W   I   +  P+    +Q   +A  L +TE  GG+D+A + +   +  D  Y ++G K 
Sbjct: 99  WGSPILQNKVIPS---VLQGEKIA-ALAITEPGGGSDVANLQTHAVRKGD-FYRINGSKT 153

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           F++S     F  +A   G  G   +  +L +   NG    +   K+G  ++ T EL F++
Sbjct: 154 FITSGHRADFYTVAVRTGGEGHGGISLILVERDRNGFSTGQPLKKMGWWASDTAELFFND 213

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  L+G  N     +    ++  L  +IM+    +++  +A+ YAR+R   G  + 
Sbjct: 214 CLVPAENLIGPENSGFIAIMSNFLMERLALSIMAYMTAQIAYEQALSYARQRDAFGRKIA 273

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              V+K  + ++A  +  A   +  +A       +  +E A A       K +C + A  
Sbjct: 274 KFQVIKHRLVEMATQVDIARNYTLNIAQRIQNGDNPIKEVAMA-------KNFCSQAAQE 326

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V   A++  GG GY+ E  + R YR++   SI  GS   M
Sbjct: 327 VTNAAVQIHGGMGYMRESVVERLYRDARILSIGGGSTEIM 366


>gi|73537997|ref|YP_298364.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121334|gb|AAZ63520.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 379

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 53/295 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ S EY              + +G+TE   G+D+ AI +   +  D  Y ++G K 
Sbjct: 112 WLPKVCSGEY-------------VLAIGMTEPGTGSDLKAIRTTAVRDGDE-YVINGSKT 157

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  IM+ + +   G   V  ++ +    G    R  +K+G  +  T EL F 
Sbjct: 158 FISNGLNADLIIMVCKTDPAAGARGVSLIVVEADREGFRRGRKLDKVGQHAQDTAELFFD 217

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           N               F +L+G+L     P E + I      AI + + +   L   ++Y
Sbjct: 218 NVRVPVGNLLGEEGRGFAYLMGEL-----PQERLSI------AISAAAKLETCLEHTLNY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARI 395
            + R      + D    K  +ADI    A A A+   + +   E   R    EEAA    
Sbjct: 267 VKERKAFNQTVWDFQNTKFKLADIK---AQAIAVRLMVDHYLGEHIRRRLTLEEAA---- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              I K +  +     + E ++  GG GY+ E  +AR + +S    I  G+   M
Sbjct: 320 ---IAKLYATEALGKALDEMVQLHGGYGYMMEYPVARAFADSRVTRIYGGTSEVM 371


>gi|116053168|ref|YP_793489.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313110055|ref|ZP_07795958.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|115588389|gb|ABJ14404.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310882460|gb|EFQ41054.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 600

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 46/308 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +  +DG Y + G+K F+S    P+S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGSYRIKGNKIFISGGDHPLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L +     G  N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           +     G+L+G     L      + + +I + + + ++  +G   SL     YAR R   
Sbjct: 271 DNGACVGYLVGKPHHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQG 326

Query: 343 HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            +  G     P              + ++A  + A D+    A  F  + + ++ + R +
Sbjct: 327 RLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQ 386

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+  
Sbjct: 387 AHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHG 446

Query: 449 AMVLDVLN 456
              LD+L 
Sbjct: 447 IQSLDLLG 454


>gi|229087252|ref|ZP_04219396.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus
           Rock3-44]
 gi|228696042|gb|EEL48883.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus
           Rock3-44]
          Length = 381

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W PK  S EY                + +TE   G+D+A+I +  +K  D  Y
Sbjct: 103 TEEQKKRWLPKCVSGEY-------------ITAIAMTEPGAGSDLASIRTTARKEGD-YY 148

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++ + +D  I++ + + +V     G  L+  +LE G       ++LK KIG
Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTKVKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             S  T EL F N        +  S    E+ K   YL   +     + V++A       
Sbjct: 206 LHSQDTAELIFENV------KVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKTAAEV 258

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARI-- 395
             H++   + ++    + I+D          + FRLA  + E    K+  ++   A +  
Sbjct: 259 MLHITKKYVKERKAFGKHISDFQ-------TVQFRLAEMYTEIEIGKTFVDDCITAHMNG 311

Query: 396 -----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   + K+W   +A  V  E ++  GG GY+EE  IAR YR+ P +SI  G+   M
Sbjct: 312 ENIVTKVSMAKWWLTDLAKKVSTECIQLHGGYGYMEEYEIARRYRDIPVSSIYAGTNEIM 371


>gi|184157723|ref|YP_001846062.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876406|ref|ZP_08444175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209317|gb|ACC56715.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322508030|gb|ADX03484.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517616|gb|ADX91997.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735416|gb|EGJ66474.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 600

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353
              +        + +A+  ++   +S   A+ YA+     R +SG    D+        P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q  S  + +  L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521


>gi|24216326|ref|NP_713807.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656481|ref|YP_000567.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24197600|gb|AAN50825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599716|gb|AAS69204.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 437

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 20/283 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +        +TE   G+D+AAI +  +K+ D  Y L+G K W  ++  +D F +L +
Sbjct: 162 PMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDE-YILNGSKMWITNAGYADWFFVLTK 220

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301
            +   G   +   + D    G+   + +  +G + + T  + F +         G     
Sbjct: 221 TDPSAGHKGITGFIVDSKTPGIIMGKKEINMGQKCSDTRGITFEDVKVPAWQMIGREGEG 280

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++ G  +  +  +    AI +V   R ++  +I YA  R+  G  +++   +   IA+
Sbjct: 281 FKIAMGAFDHTRPGV----AIGAVGVARAAMEHSIQYANTRNTFGRPIMENQGISFMIAE 336

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A DI A   L ++ A   D     + +A+       I K +C  M   V  +A++ +GG
Sbjct: 337 MARDIEAGRLLCYQAAWMIDNGFRNTYQAS-------IAKMFCADMCMRVCTDAVQVLGG 389

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            G+  E  + +  R++    I  G+     + V   L  G  +
Sbjct: 390 YGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 432


>gi|195450120|ref|XP_002072373.1| Arc42 [Drosophila willistoni]
 gi|194168458|gb|EDW83359.1| Arc42 [Drosophila willistoni]
          Length = 405

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  +   ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGD-RWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+ ++     G    + ++K+G R ++T +L F +     +   N+   P    K
Sbjct: 204 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + +A+A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALE 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  +S ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDNKQSYTKEAAMAKLAASEAATLCSH-------QCIQVLGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|195112096|ref|XP_002000612.1| GI22432 [Drosophila mojavensis]
 gi|193917206|gb|EDW16073.1| GI22432 [Drosophila mojavensis]
          Length = 406

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++   + SD  Y L+G K W  ++  ++A ++ A    ++    +  
Sbjct: 148 LSEPGNGSDAGAASTVATEKSD-RYVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGISA 206

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + D    G    + ++K+G R ++T +L F +     +   N+  G     KI +  LD
Sbjct: 207 FIVDKGIKGFSLGKKEDKLGIRGSSTCQLIFEDCE---IPKENLLGGTGLGFKIAMQTLD 263

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++G  + +A+A     + YA++R   G  +     +++ IAD++L + +A  L++
Sbjct: 264 AGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQAIQQKIADMSLAVESARLLTW 323

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D     ++EAA A++ A      C         + ++ +GG GY+ + +  RHY
Sbjct: 324 RAAWLKDNKLPYTKEAAMAKLAASEAATLCAH-------QCIQVLGGMGYVTDMAAERHY 376

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 377 RDARITEIYEGT 388


>gi|308450853|ref|XP_003088452.1| hypothetical protein CRE_07946 [Caenorhabditis remanei]
 gi|308247223|gb|EFO91175.1| hypothetical protein CRE_07946 [Caenorhabditis remanei]
          Length = 377

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE + G+D  A+  + Q+  D  + ++G K F++S       ++  V  +      + C
Sbjct: 123 LTEPQAGSDAGALLCKAQRDGDS-WVINGTKQFITSGQHAQVAIVFAVTDKSAAKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP   E     G    R+++K+G   + T  + F N     +   N+     E  KI 
Sbjct: 182 FIVPTNTE-----GYIVSRIEDKMGQHCSDTATIVFENC---RIPAENILGNEGEGYKIA 233

Query: 315 LIYLDSAIMSVS----GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+S  + ++    GM R +L  A+ YA +R   G  L+    +   +AD+A  I AA
Sbjct: 234 LSNLESGRIGIAAQCVGMARAALDAAVEYANQRKAFGVELVQHQAVAFRLADMATQIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A+  D   +  +EA+ A++ A        ++A  V ++A++  GG GY+ +  
Sbjct: 294 RQLIYHAASLKDAGLACLKEASMAKLFAS-------EIAEKVCSDAIQIHGGYGYVADFP 346

Query: 430 IARHYRESPANSILLGSGN 448
           + R YR+   + I  G+ +
Sbjct: 347 VERIYRDVRVSQIYEGASD 365


>gi|307545729|ref|YP_003898208.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307217753|emb|CBV43023.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 595

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 42/334 (12%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + P +T+ ++ AL+     H D   ++    Y     AP+ +      + LTE + G+D+
Sbjct: 125 LCPMLTAGAIEALIQ----HGD---EVLCERY----LAPLVEGRWTGTMNLTEPQAGSDL 173

Query: 212 AAITSQGQKIS-DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVP 259
           + + ++ +    DG+Y L+G K F++    D       ++LA++    EG  G   FLVP
Sbjct: 174 SLVRTRAEPSGEDGVYRLTGQKIFITWGEHDCAENIVHLVLARLPDAPEGNKGISLFLVP 233

Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVED 311
           + L  +DG+P   N +    L++K+G   + T  L F       G+L+G+       +  
Sbjct: 234 KFLVDDDGAPGERNDVVCTALEHKMGIHGSPTCVLSFGEREGAIGYLVGEPGRGLNHMFT 293

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
           M         I  +     +  +A+ YAR     RR+ +   + +   +KR +  +    
Sbjct: 294 MMNAARHKVGIQGIGVAERACQQALAYARERRQGRRNGAECAIAEHLDVKRMLLSMRART 353

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420
            A  AL+   A   D+A+   EE    R      ++ P+ K +    A  + +  ++  G
Sbjct: 354 DALRALALTCAAQMDKARHAEEEETRQRAQARVDVLIPVVKAFSTDQAVEIASLGIQVHG 413

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G GYIEE   A+  R++    I  G+     LD+
Sbjct: 414 GMGYIEETGAAQLLRDARIAPIYEGTNGIQALDL 447


>gi|228991442|ref|ZP_04151395.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228768287|gb|EEM16897.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 381

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q +   DG  Y +SG K W  ++  ++  I+ A
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP      +  GL      +K+G R++ T E+           +
Sbjct: 171 INGVEENGKKRISAFIVPT-----TSKGLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|120436729|ref|YP_862415.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117578879|emb|CAL67348.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 388

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 123/257 (47%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L ++E  GG+D+A + +   K  D  Y ++G K F+++ + +D +++ A+     G   +
Sbjct: 124 LCISEPFGGSDVAGMKTTAVKKGDK-YIINGSKTFITNGVYADFYVVAAKTAPEKGNKGM 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L D    G+   +L NK+G R++ T EL F N      +LLG+       +     +
Sbjct: 183 SMFLVDKEVKGISATKL-NKLGWRASDTAELAFDNVEIPEEYLLGEEGKGFNYIMQHFAM 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   I + +    +L  A+ Y + R   G  L    V++ ++A++  ++      ++ 
Sbjct: 242 ERLIMGINAHARSEFALDYAMGYMKEREAFGKTLDKFQVLRHSLAEMVSEVEVIKEFNYA 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   ++     +EA+ ++++A        K+A  V+ + ++ +GG GY+E+  +AR  R
Sbjct: 302 TAQRLNDGDYVVKEASMSKLLA-------TKIADEVMYKCLQMLGGYGYMEDYPMARLLR 354

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 355 DSRLGPI--GGGTSEIL 369


>gi|319760924|ref|YP_004124861.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822828|ref|YP_004386131.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115485|gb|ADU97973.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308200|gb|AEB82615.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 382

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 26/265 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + +  ++   G Y ++G K F++S M   +  +A   G  G   V 
Sbjct: 128 LAITEPGGGSDVAQLATTARR-DGGHYVVNGSKLFITSGMRADWFTVAVRTGGPGAAGVS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL  G   GL    L+ K+G  ++ T E+ F++       LLGD        +   IL+
Sbjct: 187 LLLVPGDTPGLTRSPLQ-KMGWWASDTAEIGFTDCRVPVENLLGDEG------QGFAILM 239

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A  +    +V L +A+ +AR R   G  L ++ V++  + D+A  I A  
Sbjct: 240 RNFNHERLALAAAACGYAQVCLHDAVAWARERRTFGQPLSERQVIRHRLVDMATRIEATR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL   LA+  D  +S + + A A+  A  T  +C          A++ +GG G++    +
Sbjct: 300 ALLDDLASRLDAGESPAAQIAMAKNFATRTFQFCADA-------AVQILGGMGFMRGTRV 352

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
            R YRE     +++G G   V+  L
Sbjct: 353 ERLYRE--VKVMMIGGGAEEVMKDL 375


>gi|262201939|ref|YP_003273147.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262085286|gb|ACY21254.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 366

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 40/291 (13%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W PK+ S E             V   + +TE   G+D+  + ++  +  D  Y + G 
Sbjct: 96  KTWLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKTKAIRDGDD-YVIDGS 141

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +D  I++A+ +   G   +  +L +   +G    R+ +K+G R   T EL 
Sbjct: 142 KTFITNGAQADLIILVAKTDVSEGAKGISLILVEAERDGFRRGRVLDKVGQRGQDTSELF 201

Query: 291 F-------SNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           F       SN  G   G   +   +  P E + I      A+ SV+GM  +LA  + Y +
Sbjct: 202 FDGVRVPTSNLLGAEEGQGFIQLMAQLPQERLII------AVASVAGMETALAHTLAYTK 255

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPI 399
            R   G  +      K  +A++A +         R+A  F D+  ++  +         +
Sbjct: 256 ERTAFGRPVFGFQNTKFKLAEVATET--------RIARVFVDDCITKHLDGELDIPTVAM 307

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            K+W    A  V  E ++  GG GY+ E  IAR + +     I  G+   M
Sbjct: 308 AKWWTSDRAMVVADECLQLFGGYGYMNEYPIARMWSDQRVQKIYAGTNEIM 358


>gi|83859140|ref|ZP_00952661.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83852587|gb|EAP90440.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 395

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 38/297 (12%)

Query: 146 LEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
           +++G+  + SV S+ ++    A  T  + HK + PK+ S EY              +G  
Sbjct: 96  IDSGYRSAMSVQSSLVMYPIEAFGTEEQKHK-YLPKLASGEY--------------VGCF 140

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           GLTE  GG+D  A+ +  +K +DG Y L+G K W  +SP+SD  ++ A+++G +  F+V 
Sbjct: 141 GLTEPDGGSDPGAMRTTARK-ADGGYVLNGAKMWITNSPISDLAVVWAKLDGEIRGFIV- 198

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
               D    G    +++ K+  R++ T  +  ++ F     LL  +    GP   +    
Sbjct: 199 ----DKGTEGFDCPKIEGKLSLRASITGSISLNDAFVPEENLLPHVKGLRGPFSCLNKAR 254

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           Y   A  ++      L  A  YA  R V G  +    ++++ +AD+  +IA     +  L
Sbjct: 255 Y-GIAWGAMGAAEFCLHAARDYAMERVVFGKPIAGTQLVQKKLADMQTEIALGYQGALAL 313

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               D       + A+      + K   C  A A+  EA +  GG+G  EE  I RH
Sbjct: 314 GRMLD-------QGAWIPEAISMMKRNNCGKALAIAREARDIHGGNGIAEEYHILRH 363


>gi|148360485|ref|YP_001251692.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila
           str. Corby]
 gi|296106448|ref|YP_003618148.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282258|gb|ABQ56346.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila str. Corby]
 gi|295648349|gb|ADG24196.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|307609660|emb|CBW99167.1| hypothetical protein LPW_09511 [Legionella pneumophila 130b]
          Length = 384

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 153/380 (40%), Gaps = 55/380 (14%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P    +LR +   G+   +     E +   Q  ++ AA ++   QL  
Sbjct: 26  PMADFWDEQGYFPI--EILREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78

Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           G + + +  S     AS+V    +  + K W PK+ S E             V     LT
Sbjct: 79  GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D A++ ++  K  +  Y L+G K F+S   +SD ++ + +        +   L+
Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310
           E  +P GL + +L+ K+G R+  T  L F N              GF +  LN   G   
Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+ G    L  +  Y   R   G  L     ++   AD+  D  AA 
Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +R A + D           A +   + K     +A  +  +AM+  GG GY+ +  I
Sbjct: 295 LMVYRAAAAMDNDDPN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            R +R+   + IL G+   M
Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368


>gi|6978433|ref|NP_037216.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Rattus norvegicus]
 gi|2492630|sp|P70584|ACDSB_RAT RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|1498500|gb|AAB17136.1| short-branched chain acyl-CoA dehydrogenase precursor [Rattus
           norvegicus]
 gi|149061278|gb|EDM11701.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b
           [Rattus norvegicus]
          Length = 432

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 31/287 (10%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           K+F +      KA      V   LG   L+E   G+D  A+ ++  K S   Y ++G K 
Sbjct: 148 KLFRKHGTEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFALKTRADK-SGNYYVINGSKM 206

Query: 233 WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           W  ++  ++ F++ A V+   G     CFLV R  E     G    R +NK+G R+++T 
Sbjct: 207 WISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTE-----GFQIGRRENKMGIRASSTC 261

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341
           +L F N     + + +V        K  I  L+   + ++   + LA+      I Y + 
Sbjct: 262 QLTFENV---KVPETSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKE 318

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + D   ++  +A +A  + AA  L++  A   +  +   +EA+ A       K
Sbjct: 319 RMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNAARLVEAGRPFIKEASMA-------K 371

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           Y+  ++A    ++ +E +GG GY ++  + + +R++   +I  G+ N
Sbjct: 372 YYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGTSN 418


>gi|163943029|ref|YP_001647913.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229014510|ref|ZP_04171628.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229064991|ref|ZP_04200289.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229136160|ref|ZP_04264913.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|229170050|ref|ZP_04297741.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|163865226|gb|ABY46285.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228613397|gb|EEK70531.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228647319|gb|EEL03401.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228716292|gb|EEL68004.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|228746860|gb|EEL96745.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 379

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPDSKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIIFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A++     + YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQSALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|229085274|ref|ZP_04217516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228697993|gb|EEL50736.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 569

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 43/329 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLSEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 TWTLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R      L+D  +++  IA++ +    A + ++R A   D+A   S+E+   ++ 
Sbjct: 283 QYGKERKQFQKELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDDAIHESDESIMQKMS 342

Query: 397 A-----PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  I K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAMECAINKVNASETLGNIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK-----GTNLFEQLFSTLEQD 475
           L V  +L K     G  + E  F  +E++
Sbjct: 403 LTVAKMLMKETKSLGDQVEEDTFENVERN 431


>gi|222109369|ref|YP_002551633.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728813|gb|ACM31633.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W PK+ + E             V     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKDGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K +++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++ +  + V+  R+ L
Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 RDALAYALERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GG+GY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356


>gi|302341942|ref|YP_003806471.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301638555|gb|ADK83877.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 548

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 34/341 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259
           ++E +GG+DI A   +     D  Y L G K+F S+  +D  ++ A+V G  + G F+VP
Sbjct: 180 MSEIQGGSDIPANLLEAVPAGDH-YLLHGSKFFCSAMQADYAVVTAKVSGGEKPGAFIVP 238

Query: 260 RLL----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMK 313
             L    E    N     R+K K+G     T E+E+     + +G  D  V+   V  + 
Sbjct: 239 AWLPGDKEREKRNACRINRIKWKMGTAELPTAEVEYDGAVAYAVGPTDRGVANA-VGVVL 297

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L     S + M  +  EA  Y++ R V G  +   P+    +  +       TA +
Sbjct: 298 TLSRLTVGFSSAAAMVRAAREAGLYSQFRDVFGQKICQTPLAAHQLRGMINTSRRTTAAA 357

Query: 374 FRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           F++   F             +E  +   +    R +  I K      AP VI +AM   G
Sbjct: 358 FKVFGLFVSLGRRLQGGLDSNEPLAMRRKRFLLRELIIIQKLVTAFEAPEVIRQAMSIFG 417

Query: 421 GSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           G G IE+  S+ R YR++  N +  G  N +++  L  L +    +       +   G+ 
Sbjct: 418 GHGVIEDFVSLPRLYRDAAVNELWEGPRNVLLMQALRDLLRVQGWYPAADFVADMLAGAQ 477

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
             +V  +  +          LA F+ +  A+ ++A ++ RA
Sbjct: 478 PARVAELAAE----------LAGFMADPPAVEATAQSMARA 508


>gi|115461843|ref|NP_001054521.1| Os05g0125500 [Oryza sativa Japonica Group]
 gi|47900455|gb|AAT39231.1| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|57863927|gb|AAS90672.2| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113578072|dbj|BAF16435.1| Os05g0125500 [Oryza sativa Japonica Group]
 gi|215694715|dbj|BAG89906.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630047|gb|EEE62179.1| hypothetical protein OsJ_16966 [Oryza sativa Japonica Group]
          Length = 409

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 14/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +K+ DG Y ++G+K W  + P +   ++ A+ +   G   +
Sbjct: 151 LAMSEPNSGSDVVSMKCKAEKV-DGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P     Q+L +K+G R + T EL F N F      L      V  M   + 
Sbjct: 210 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLD 268

Query: 318 LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+  +++   +  M+  L  A+ Y R+R   G  + +   ++  +AD+   + ++ +  +
Sbjct: 269 LERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVY 328

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A   D  K   ++ A   + A        + A  V  +A++C+GG+GYI E    R  
Sbjct: 329 SVARDCDNGKVDRKDCAGVILFA-------AERATQVALQAIQCLGGNGYINEYPTGRLL 381

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 382 RDAKLFEIGAGT 393


>gi|293608460|ref|ZP_06690763.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829033|gb|EFF87395.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 600

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPQYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q     +    L S  +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLMDQFIGQQQSSGTLKSYQEKLAELKQQWLSLTKMIAEKAKHNPEEIGAAS 521


>gi|261334054|emb|CBH17048.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 411

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 43/275 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ + E+              IG +G++E   GTD+  + +   K S+G Y L+G K
Sbjct: 144 WLPKVLTGEH--------------IGAMGMSEPGAGTDVLGMLTTATKESNGKYILNGGK 189

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D  ++ A+V+G +  F+V +       +G    +  +K G R +   +L F
Sbjct: 190 TWVTNGTVADLVLVYAKVDGEITAFVVEK-----GASGFSVGKKIDKCGMRGSHMCQLFF 244

Query: 292 SNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
            N    +LG+ N+      G V  M+    L+   ++++ M V +A+        YA  R
Sbjct: 245 DNV---VLGEENLLGTEGKGLVAMMR---NLEVERLTLAAMAVGIADRCVELMTCYANER 298

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++R IA+   +  AA +L++ ++ S              R+ +   K 
Sbjct: 299 KTFGKHIWNYGQIQRYIAETFAETEAAKSLTYAVSRSVAPGNCN-------RLGSDAVKL 351

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   +A      AM+ +GG GY  +  + R +R++
Sbjct: 352 FAAPVAKRAADNAMQVMGGMGYARDMPVERLWRDA 386


>gi|153941172|ref|YP_001392122.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. Langeland]
 gi|170754517|ref|YP_001782454.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum B1 str. Okra]
 gi|152937068|gb|ABS42566.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. Langeland]
 gi|169119729|gb|ACA43565.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum B1 str. Okra]
 gi|295320127|gb|ADG00505.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. 230613]
          Length = 635

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + + +  G  + +  +K+G RS+AT EL        +L D+ V   P
Sbjct: 172 TTPNIGTRGISAFIVEKTFEGFSFGKHYDKMGIRSSATAEL--------ILNDVKV---P 220

Query: 309 VEDM--------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
            E++        KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q +
Sbjct: 221 KENLLGKEGDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQI 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  + AA  L +  A+  +  +  S EAA A       K +   +   ++ +
Sbjct: 281 ISFKLADMATKLRAARLLIYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVND 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GGSGY++   + R YR++   +I  G+
Sbjct: 334 ALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365


>gi|159901273|ref|YP_001547520.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894312|gb|ABX07392.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 386

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP  +  +   + ++E   G+D+AAI ++  +  D  Y ++GHK W  +   +D   +LA
Sbjct: 114 APAIRGEMIAAVAISEPDAGSDVAAIRTRAVRDGDE-YVINGHKMWITNGTQADFITLLA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           +     G   +  L+   +  G    +   K+GN S+ T  L F +        +GD   
Sbjct: 173 RTSDEPGYKSMSLLIVPTNTPGFHVSKKLEKLGNHSSDTALLAFDDVRVPVANRIGD--E 230

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G V  M+      L  A+ +VS M   +    HY R R   G  LI+   ++  +A++
Sbjct: 231 GQGFVLQMQQFQKERLIGAVSAVSAMERIVEMTSHYCRERQTFGKPLIENQYIQFRLAEL 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I A   L++            ++E + A++ A        ++A  V    ++  GG 
Sbjct: 291 LTEIEALRQLNYHCTRLLLAGHDITKEVSMAKLKA-------GRLAREVADTCLQFHGGM 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY+EE  +AR++R++   SI  G+   M+
Sbjct: 344 GYVEEYPMARYFRDARLLSIGGGADEIML 372


>gi|197104356|ref|YP_002129733.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477776|gb|ACG77304.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 382

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 29/248 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GRVG 254
           LTE   G+D  A+ ++  +  D  Y L+G K ++++   +D F ++A+ +        V 
Sbjct: 124 LTEPEAGSDSGAVQTKAVRDGDD-YVLNGSKRYITNANRADLFTVMARTDPSKPGGSGVS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLV R L      G+   + + K+G +     ++ F N     +   N   G  E  KI
Sbjct: 183 AFLVERNLP-----GVTVGKPEKKMGQQGAHICDVNFDNV---RVPAENRLGGEGEGFKI 234

Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + +S + V +AE     ++ YA  R   G  L +  +++  IAD   +  A
Sbjct: 235 AMQVLDRGRLHISAICVGVAERLIADSVAYAAERKQFGQALSNFQLVQGMIADCKTEALA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL    A   D  +S + EAA A       KY+  +M   V   A++  GG+GYI E 
Sbjct: 295 ARALVMETARKRDAGQSVTMEAAAA-------KYFASEMVGRVADRAVQIFGGAGYIAEY 347

Query: 429 SIARHYRE 436
            I R YR+
Sbjct: 348 GIERFYRD 355


>gi|299144482|ref|ZP_07037561.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517570|gb|EFI41310.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 645

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +   D  Y L+G K F++ +P +D +++ A     +G   +
Sbjct: 123 FGLTEPEAGSDAGGTETTAELDGD-YYILNGGKIFITNAPKADFYVVFAVTTPGIGTHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  +    +K+G RS++T EL F+N     +   N+     +  +I +  
Sbjct: 182 SAFIVEKGWEGFSFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKEGQGFRIAMQT 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ YA+ R   G  +  Q ++   +AD+A  + AA  L
Sbjct: 239 LDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQIISFKLADMATKLRAARFL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A    E K   E       MA   K +   +A  ++ +A++  GG+GY++   + R
Sbjct: 299 VYSAA----EMKHNHENYGMESAMA---KQYASDVALEIVNDALQIHGGNGYLKGMDVER 351

Query: 433 HYRESPANSILLGS 446
            YR++   +I  G+
Sbjct: 352 FYRDAKITTIYEGT 365


>gi|297616691|ref|YP_003701850.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144528|gb|ADI01285.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 382

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 18/262 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D+A ++++ QK+ D  Y L+G K F+S+  ++  + + A ++ ++G   +  
Sbjct: 124 LTEPGAGSDVAGLSTRCQKVGDE-YILNGTKQFISNGGVAGQYTVFATLDKKLGHKGICA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + D    G+   + ++K+G RS+ T ++ F +     +   N+     +  KI +  LD
Sbjct: 183 FMVDRDTPGISVGKKEDKLGIRSSNTTQVIFEDV---KVPAKNMLGKEGDGFKIAMKTLD 239

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            +   V+ M + +A+A     + YA  R   G  +I    ++  +AD+A  I A   L  
Sbjct: 240 ISRACVAAMALGVAQAAFEVSVKYAMERQQFGKPIISFQAIQFMLADMAQLIEAGRLL-- 297

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                + EA  + ++       A + K +C  +A  V  +A++  GG GY +E  + +++
Sbjct: 298 -----YLEASCKQDQGLPYTDAASLAKCFCGDVAMKVATDAVQIYGGYGYTKEYPVEKYF 352

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++    I  G+     + + N
Sbjct: 353 RDAKIMQIFEGTAQVQRIVIAN 374


>gi|296269787|ref|YP_003652419.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092574|gb|ADG88526.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D AA+ ++     DG Y + G K W     ++D + ++A+   EG  G  CF
Sbjct: 127 LSEPHSGSDAAALRTRAAADEDG-YVIDGVKAWITHGGVADFYTLMARTSDEGARGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
            VP        +GL +   + K+G RS+ T ++ F    G  L    +     E  KI +
Sbjct: 186 HVP-----AGVDGLSFGAPERKMGMRSSPTAQVRFD---GVRLRREALLGAEGEGFKIAM 237

Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   V +A+A       YA+ R   G  + D   +   +AD+A  I+AA 
Sbjct: 238 AALDGGRLGIAACAVGVAQAAFEAASRYAKERRQFGSRIADFQGISFMLADMATQISAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +    +AA A++ A         M   V  +A++  GG GY+E+  +
Sbjct: 298 ALYLEAARLRDAGRPYGTQAAMAKLFA-------TDMCMKVTTDAVQVFGGYGYVEDFPV 350

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 351 ERYMREAKVLQIVEGT 366


>gi|228997544|ref|ZP_04157157.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229005167|ref|ZP_04162890.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228756142|gb|EEM05464.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228762172|gb|EEM11105.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 381

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q +   DG  Y +SG K W  ++  ++  I+ A
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGVEENGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIILDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|222529223|ref|YP_002573105.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456070|gb|ACM60332.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 381

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 36/286 (12%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKEKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +D +++ A  +   G    PR     ++E G     C ++ ++K+G R+++T EL 
Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIIEKGYEGFYCGKK-EDKMGIRASSTTELI 212

Query: 291 FSNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
           F +     +   N+     TG +  MK     D     V+ M V +A+     AI YA+ 
Sbjct: 213 FEDC---KVPKENILGREGTGFIIAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPIT 400
           R   G  L     ++  +AD+ ++I AA +L +      D  AK  S+E++  ++ A   
Sbjct: 267 RVQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSGAKDFSKESSACKVFAS-- 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +A  V  +A++ +GG+GY+++  + +  R++    I  G+
Sbjct: 325 -----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|170719703|ref|YP_001747391.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169757706|gb|ACA71022.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 600

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 50/310 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ +A I ++ +   DG Y + G+K F+S     +S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLADIRTRAEPAGDGSYRIKGNKIFISGGDHELSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGSPNG---LCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS  G   +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYLVNQDGSCGGRNDVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G  +     +  M    +I + + + ++  +G   SL     YAR+R   
Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQR--P 324

Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P++           ++A  + A D+    A  F    + D   +R
Sbjct: 325 QGRLPDSKDPLSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTADGESAR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A   ++ PI K W           A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 QQAQALLDLLTPIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLN 456
                LD+L 
Sbjct: 445 EGIQSLDLLG 454


>gi|297180173|gb|ADI16395.1| acyl-CoA dehydrogenases [uncultured bacterium HF130_12L15]
          Length = 596

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 36/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ ++ IT++ +   DG Y L G K ++S    +       ++LA++ G     
Sbjct: 162 LSEPQAGSSLSDITTRAEPAGDGTYRLIGRKMWISGGDQEISENIVHLVLAKIPGGPAGV 221

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGD- 301
             +  F+VP+  +LE G     NG+    L +K+G R      L   E S   G+LLG+ 
Sbjct: 222 KGISLFIVPKHEVLEGGGIGERNGVTLAGLNHKMGYRGTTNTLLHLGEDSPCVGYLLGEP 281

Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILID 351
              L+     + + +I + L +  +  +G + SLA A    + R   G         +I+
Sbjct: 282 HKGLSYMFQMMNEARIGVGLGATALGAAGYQASLAYARERPQGRQPDGKDPSSAQVPIIE 341

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405
              ++R +      +  + AL    A+  D  +  ++E A         ++ P+ K W  
Sbjct: 342 HADIRRLLLAQKAAVEGSLALGLYCADLVDTLRVETDETARRENELLLDLLTPVAKSWPS 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +        A++ +GG GY  +  + R YR++  N I  G+     LD+L 
Sbjct: 402 EFCLEANKHAIQILGGYGYTRDFPLERIYRDNRLNPIHEGTHGIQGLDLLG 452


>gi|296284823|ref|ZP_06862821.1| acyl-CoA dehydrogenase family protein [Citromicrobium bathyomarinum
           JL354]
          Length = 580

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 154/352 (43%), Gaps = 55/352 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQVE 250
           + LTE + G+D+ A+ +  Q I DG     Y + G K +++     +++  I  +LA++ 
Sbjct: 162 MNLTESQAGSDVGALRTTAQPIEDGEHAGKYRIKGQKIYITWGEHELAENIIHLVLARLP 221

Query: 251 GR------VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           G       +  FLVP+  L +DG+P   N L    L++K+G  ++ T  + + +     G
Sbjct: 222 GAPEGSRGISLFLVPKYHLKDDGTPGAHNDLRCVSLEHKLGINASPTCVMSYGDNDECIG 281

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348
            L+G  N     +  M     +++A ++V    V +AE     A+ YA  R  S      
Sbjct: 282 ELVGAENRGLAAMFTM-----MNNARINVGSQGVQIAERATQQALAYALERVQSARAGAE 336

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITK 401
                 ++D P ++R +  +     A   L +  A   D        A A A ++ P+ K
Sbjct: 337 DRTPVAIMDHPDVRRMLLRMRSLTEAMRGLLYYTAGQVDRGDIGDAAAKARAEVLVPMLK 396

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---L 458
            W       V +  ++  GG G++EE   A+H+R++    I  G+      D++     L
Sbjct: 397 AWATDTGIEVASLGIQVHGGMGFVEETGAAQHFRDARIAPIYEGTNGIQAADLVTRKLGL 456

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           E G  + + LF+ + +D G   +          +L  E   +AR++ E  +L
Sbjct: 457 ENG-EVLQALFADIARDAGEEPQLQ--------ALAGECAAIARWMREDASL 499


>gi|301057558|ref|ZP_07198638.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300448282|gb|EFK11967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 384

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA----QVE 250
           IG GLTE   G+D  A ++   +  D  + ++G K   +   +PM+   I+ A    +  
Sbjct: 123 IGFGLTEPNAGSDAGATSTTATRDGDS-WIINGRKTLTTNADTPMTKGSIVQALTGTRPN 181

Query: 251 GRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G+V   CF+V    E+ +P G     LK K+  R + T EL  +N     + D  V   P
Sbjct: 182 GKVEYTCFIV----ENDTP-GFTRNTLKRKLMWRGSNTAELFLNNC---RVPDNAVLGNP 233

Query: 309 VEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K +L  LD   +S+  M +  A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 234 GDGFKQMLATLDGGRLSIGAMGLGCAQGAYEAALRYSKERVQFGKPISRQQAISFKLADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL I  A  L ++     +  +   +E+A A++       +C ++A  V  EA++  GG 
Sbjct: 294 ALKIELARNLLYKACWLAENKRPYGKESAMAKL-------YCSEIAREVADEAVQVHGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           G  ++  + R YR+     + +G G + VL ++
Sbjct: 347 GLFKDYDVERFYRDQ--RLLQIGEGTSEVLRIV 377


>gi|218900467|ref|YP_002448878.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228905095|ref|ZP_04069127.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228968470|ref|ZP_04129458.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218543147|gb|ACK95541.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228791176|gb|EEM38790.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228854538|gb|EEM99164.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 379

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
                        + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TNPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|330954906|gb|EGH55166.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 592

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAPAGTDLGMIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVADDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA+ R  S               +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++AA  R      ++ P++K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVSKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI      +  R+     I  G+     LD++     G+N  F
Sbjct: 405 IGLETTVHGQQVFGGHGYIRGWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|294339993|emb|CAZ88356.1| acyl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 594

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 172/394 (43%), Gaps = 70/394 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++  ++ AL+T  T    + + P++ S E+  T             + LTE + G+
Sbjct: 124 LCPLLSDGAIEALLTAGTDAQKQRYIPRLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+A + S+ +   DG Y L G K +++     M+D  + L         A V+G +  F+
Sbjct: 171 DLALVRSRAEPQGDGTYRLFGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKG-ISLFI 229

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V ++LEDG  N +    +++K+G +++ T  L + +      G   V TG + ++     
Sbjct: 230 VLKVLEDGRRNDVWCASIEHKLGIKASPTAVLIYGD------GKGEVGTGAIGELVGEAN 283

Query: 313 ----KILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI-----LIDQPV 354
                + I +++A  +V    +++AE         A    + R V G       ++  P 
Sbjct: 284 RGLEYMFIMMNAARYAVGLQGIAVAERAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPD 343

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKM 407
           ++R +  +        AL+   A+  D  ++  +       EAAY   + P+ K +  +M
Sbjct: 344 VRRMLMTMRALTEGCRALALVAASLHDVGRAHPDAGQRAAHEAAY-EFLVPLVKGYSTEM 402

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL- 464
           +  V +  ++  GG G+IEE   A++YR++   +I  G+      D++    +  G  L 
Sbjct: 403 SIEVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVGRKTVRDGGALA 462

Query: 465 --FEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             F    S +E+ L ++G      +   +   +E
Sbjct: 463 LHFAARVSKVEEALTATGDAQAVAMAGQLRQARE 496


>gi|62465535|gb|AAX83264.1| short-chain acyl-CoA dehydrogenase [Equus caballus]
          Length = 332

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255
           L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +  
Sbjct: 78  LSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNSWEASATVVFASTDRSLQNKGISA 136

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    KI 
Sbjct: 137 FLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGFKIA 188

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL + +A
Sbjct: 189 MQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALALESA 248

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R A   D  K  ++EAA A++ A        + A A+  +A++ +GG GY+ E  
Sbjct: 249 RLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMP 301

Query: 430 IARHYRESPANSILLGS 446
             RHYR++    I  G+
Sbjct: 302 AERHYRDARITEIYEGT 318


>gi|332305102|ref|YP_004432953.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172431|gb|AEE21685.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 586

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 51/332 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK+ S E+  T             + LTE   GTD+AA+ ++     D  Y
Sbjct: 146 SEHLQQSYLPKMLSGEWPGT-------------MNLTEPDAGTDLAAVKTKAVPNGD-HY 191

Query: 227 CLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPR--LLEDGSP----N 268
            +SG K F++     M+D  + L         A V+G +  F+VP+  L E+G P    +
Sbjct: 192 LISGQKIFITWGDHQMTDNIVHLVLARLPDAPAGVKG-ISLFIVPKFNLDENGEPGERND 250

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             C   L++K+G   + T  + F +  G   +L+G+ +     +  M         +  +
Sbjct: 251 AYCV-SLEHKLGIHGSPTCVMSFGDNGGAKGYLVGEAHKGLSYMFTMMNHARQGVGLQGL 309

Query: 326 SGMRVSLAEAIHYARRR------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +    S   A+ YA+ R        S   ++  P ++R +  +     A  AL    A  
Sbjct: 310 AISEGSYQHALAYAKERLQGTNKDGSRFTIMKFPDVRRMLMQMKSSTEAMRALCLVAAAE 369

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D   S     A + +  PI K WC +++  +     +  GG G++EE   A+ YR++  
Sbjct: 370 IDRGNS-----ARSELFTPIVKGWCTELSQELTYLGTQIHGGMGFVEETGSAQFYRDARI 424

Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468
            +I  G+     LD++    L+ +G +L E L
Sbjct: 425 LTIYEGTTGVQALDLVGRKTLVNQGESLGELL 456


>gi|326387565|ref|ZP_08209171.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207611|gb|EGD58422.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 596

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 151/345 (43%), Gaps = 57/345 (16%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T+ ++ A+    +  + + + PK+   E+  T             + LTE   GT
Sbjct: 125 LYPGLTNGAIAAIDAYASDTLKETYLPKMVGGEWSGT-------------MCLTEPHCGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257
           D+  + ++ +   DG Y +SG K F+S+   D       ++LA+       V+G +  FL
Sbjct: 172 DLGLLRTRAEPAGDGSYKVSGAKIFISAGEQDLTDNIVHLVLARLPDAPRGVKG-ISLFL 230

Query: 258 VPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L D +      NG     +++K+G +++AT ++ F    G+L+G+ +     +E M
Sbjct: 231 VPKFLPDAAGAWSVRNGAHCTMIEHKMGIKASATCQMLFEEATGWLVGEPHRG---LEAM 287

Query: 313 KILIYLDSAIMSVSGMRVSLA---EAIHYARRR----HVSGGILIDQPV--------MKR 357
             ++  +   + + G+ +  A    A+ YA+ R     +SG    D+P         ++R
Sbjct: 288 FTMMNAERVGVGIQGLGIGEAAYQSAVWYAKERVQGRSLSGTKHPDKPADPIIVHPDVRR 347

Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411
            +  I         ++  ++ + D  K       R   A    +M P+ K     +    
Sbjct: 348 MLLTIRAWNEGCRGIAGWISRALDAEKHGETPEVRQRAADLVALMTPVVKALFTDLGLES 407

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + A++C GG G+I E  + ++ R++    +  G+     LD++ 
Sbjct: 408 ASLAVQCYGGHGFIRESGVEQYMRDARIAMLYEGTNGIQALDLVG 452


>gi|253682754|ref|ZP_04863549.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253560953|gb|EES90407.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 25/284 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + F  E   +   P   T V +G  GLTE   GTD A   +      D  Y L+G+K
Sbjct: 96  WPIETFGTEEQKSKYLPDLATGVKLGAFGLTEPNAGTDAAGQLTVAVDKGD-YYLLNGNK 154

Query: 233 WFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+++  ++D +++ A  +  +G   +   + +    G  +   + K+G   ++T EL F
Sbjct: 155 IFITNGEVADVYVVFAMTDKALGNRGISAFIVEKGMEGFSFGSHEKKMGIHGSSTCELIF 214

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            +       LLG++N      +  KI ++ LD   + V+   + +AE    A   +V   
Sbjct: 215 KDVKLPKENLLGEIN------KGFKIAMMTLDGGRIGVAAQALGIAEGALDATVEYVKTR 268

Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              ++P+      +  +A++   I AA  L +  A + D  ++ +E+AA A++ A  T  
Sbjct: 269 EQFNRPLSAFQNTRFTLAEMKTRIEAARYLVYSAAQAKDNGEAYAEKAAMAKLFASET-- 326

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                A  V  +A++  GG GY  +  + R  R++    I  G+
Sbjct: 327 -----ARDVTCKAVQLFGGYGYTRDYPVERMMRDAKITEIYEGT 365


>gi|229085424|ref|ZP_04217665.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228697900|gb|EEL50644.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 371

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q +   DG  Y +SG K W  ++  ++  I+ A
Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 160

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP      +  GL      +K+G R++ T E+   +       +
Sbjct: 161 INGVEENGKKRISAFIVPT-----NSEGLTISSPYDKMGVRASNTCEIVLDSVRVPKENI 215

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 322

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359


>gi|167768666|ref|ZP_02440719.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1]
 gi|317498911|ref|ZP_07957195.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167710190|gb|EDS20769.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1]
 gi|291559747|emb|CBL38547.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
 gi|316893836|gb|EFV16034.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 44/267 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253
            GLTE   G+D     +  +K  D  Y L+G K F  + P++D  A   L + E +   +
Sbjct: 124 FGLTEPNAGSDAGGCVTVAEKDGDD-YILNGLKCFNTNGPLADYTAVYALTEPEKKAKGL 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF+V +    G+P G    ++++K+G RS    E+        +L ++ V   P E+M 
Sbjct: 183 SCFVVKK----GTP-GFSVGKIEDKMGIRSAQVSEM--------ILENVRV---PKENMI 226

Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
           +         +  LD   + V+   + +AE     A  Y + R   G  L     +   +
Sbjct: 227 VESGQGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ ++I AA  + ++ A    E +  S  AA A       KY C + A  V  EA++ +
Sbjct: 287 AELEMEIEAAKLMLYKAATDKQEGRPYSLPAAKA-------KYLCTEAAMHVTTEAVQML 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY++E  + R  R++    I  G+
Sbjct: 340 GGNGYMKEYHVERMMRDAKITQIYEGT 366


>gi|319787394|ref|YP_004146869.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465906|gb|ADV27638.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 382

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D + +  +  +  DG Y ++G K W  S P++   I+ A      G   +
Sbjct: 123 FALTEPQSGSDASNMRCRAVRQDDGSYVINGKKSWITSGPVARYIILFAVTNPEQGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D S  G    + + K+G R++AT E+EF++   ++     V     +  KI +  
Sbjct: 183 TAFMIDTSREGFHRGKTEPKLGIRASATCEIEFAD---YVARPEEVVGVEGQGFKIAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   + +A A     I Y R R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAIGIARAAYEKTIEYVRERKAFGSPIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + K  S EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGKPFSAEAAIAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|186683598|ref|YP_001866794.1| acyl-CoA dehydrogenase domain-containing protein [Nostoc
           punctiforme PCC 73102]
 gi|186466050|gb|ACC81851.1| acyl-CoA dehydrogenase domain protein [Nostoc punctiforme PCC
           73102]
          Length = 394

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 38/283 (13%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           DW PK+ S E             +     L+E   G+D  ++ +    +S   Y L+GHK
Sbjct: 108 DWLPKLASGE-------------IIAAFALSEPNVGSDAKSVETTA-TLSGDAYILNGHK 153

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W     ++D F++ AQ EG+   FLV    E  SP GL  + +   +G R++   EL  
Sbjct: 154 KWITYGQIADVFLVFAQCEGKPSAFLV----EKNSP-GLSIKPIFGMLGVRASMLAELHL 208

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH 343
           ++       L+G L      V        LD    SV+   V +A+A     I Y   R 
Sbjct: 209 NDCRIPQENLVGRLGFGFSYVASSA----LDYGRYSVAWGSVGIAQACLSACIRYTSDRK 264

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L +  ++++ I ++  +I AA  L ++ A    E    S     + I   I KY+
Sbjct: 265 QFGVYLKEHQLIRQMITNMIANIKAARLLCYQ-AGYLKEIGDPS-----SIIETSIAKYF 318

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +A  V ++A++  GG+G   E  + R+ R++    I+ GS
Sbjct: 319 TSTIASQVASDAVQIHGGNGCSSEYPVERYLRDAKIMEIIEGS 361


>gi|171463650|ref|YP_001797763.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193188|gb|ACB44149.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 595

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 53/342 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +D  Y ++G K F+SS   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTKAELQADDTYAITGTKIFISSGDHDLAENIVHLVLARLPDSPIGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F VP+     DGS    N +    L++K+G   NAT  + F    G L+G+ +  
Sbjct: 226 KGISLFAVPKFQVGADGSVGKSNAVSCGSLEHKMGIHGNATCVMNFDGAIGTLVGEPHKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +  M     L   + S+    V+   +  YA+ R              +   +I  P
Sbjct: 286 LNAIFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLTGAKAPEKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCK 406
            ++R +        A  A S+ +A       N  DE   R E      ++ PI K +   
Sbjct: 346 DVRRMLLTQRAYAEAGRAFSYWVALMIDTELNHPDEG-VRKETGEMVTLLTPIIKAFLTD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A     E M+  GG GYI E  + ++ R++  N I  G+     LD+L           
Sbjct: 405 NAFVATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLG---------- 454

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
                  + LG  GKK +T     I    +D+G+ + + E I
Sbjct: 455 ------RKVLGDMGKK-LTKFGKIIEKFIDDEGVRKEMQEFI 489


>gi|317130792|ref|YP_004097074.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475740|gb|ADU32343.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 383

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D A I ++  K  D  Y L+G K F+++  ++D +I+ A+    +G   V
Sbjct: 123 FALTEPSAGSDAANIKTRAVKKGDQ-YILNGEKVFITNAGVADTYIVFAKTNPNLGSKGV 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306
              + + +  GL     + K+G   + T+ + F +              GF +   N++ 
Sbjct: 182 TAFIVEKNTPGLFIGTKEKKMGLHGSNTMPIHFDDAIVPAENRLGEEGEGFKIALANLNV 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G +           A  ++     +L +A +YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 242 GRI---------GIAAQALGIAEAALEQATNYAKERKQFGKTIGSQQAIALKLADMATKV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++R A   +  K   +E +       ++K +   +A     EA++  GG GY E
Sbjct: 293 EAAKLLTYRAAYLHEHRKPCEKEVS-------MSKSYASTIAMEAATEAIQVFGGYGYTE 345

Query: 427 ERSIARHYRESPANSILLGS 446
              + R +R++    I  G+
Sbjct: 346 AYPVERFFRDAKVTQIYEGT 365


>gi|303312981|ref|XP_003066502.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106164|gb|EER24357.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036633|gb|EFW18572.1| glutaryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 429

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y L+G K W  +SP+SD F++ A++E  G++ 
Sbjct: 165 FGLTEPNHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIK 224

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R  +   P  L    +KNK   R++ T  ++  N       +L D+    GP   
Sbjct: 225 GFIVQR--DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP--- 279

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D
Sbjct: 280 ---FTCLNSARLGIAFGTMGALEDCIDRARTYSIERKQFKGNPLAKYQLIQKKLADAATD 336

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   DE K   E       M  +TK   C  A        E  GG+   
Sbjct: 337 AAYGTLAAVQVARLKDEGKCTPE-------MISMTKRQNCDRALVGARTLQEVFGGNAAS 389

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 390 DEYHIGRH 397


>gi|149924253|ref|ZP_01912626.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149814878|gb|EDM74443.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 383

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 58/292 (19%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           PK+ S EY            V  G  L+E   G+D  A+T++ +K   G + L G K W 
Sbjct: 111 PKLCSGEY------------VVGGFALSETGAGSDPGAMTTKARKTDKG-WVLDGSKLWI 157

Query: 235 LSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            S   +  F++ A+     G     CFLVP     G   G+   + + K+G R + T  L
Sbjct: 158 TSGTDAGLFVVWARTSDAPGTKGISCFLVP-----GDAPGVTRGKAEEKMGQRGSPTTAL 212

Query: 290 EFSNT-FG--FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE------------ 334
           EF     G   LLG+L     P+           A+M++ G R+ +A             
Sbjct: 213 EFEGVELGEEALLGELERGF-PI-----------AMMALDGGRIGIASLALGVGLAASEF 260

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G  +     ++  +AD   +++AA  L+ R A+  D  +  + EA+ A+
Sbjct: 261 ANKYASERKQFGRPINSFQALQWYMADSHTELSAARLLTLRAASLKDAKQPFTREASMAK 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +    +  C         A++ +GG GY ++  + R+ R+     I  G+
Sbjct: 321 LYSSEKAFQACN-------RALQMLGGYGYTQDFPVERYLRDVRVTMIYEGT 365


>gi|121592565|ref|YP_984461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604645|gb|ABM40385.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W PK+ + E             V     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKDGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K +++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++ +  + V+  R+ L
Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 RDALAYALERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GG+GY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356


>gi|152986136|ref|YP_001346285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961294|gb|ABR83319.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 593

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGMIRTRAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNPVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353
              +  M     L   I  +    +S   A+ YAR R  S    G +  D+        P
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQGAVAYARERLQSRAPTGPVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK       RS+  A   ++ P+ K +    
Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    +  GG GYI E    +  R+     I  G+     LD++   ++  G  LF
Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464

Query: 466 EQLFS 470
             +FS
Sbjct: 465 LSIFS 469


>gi|153005024|ref|YP_001379349.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028597|gb|ABS26365.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 389

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 24/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +       GLTE   G+D A + +   +  D  + L+G K F++   + D F++LA 
Sbjct: 123 PLARGEKLAAWGLTEPGSGSDAAGLRTTAVRRGD-RWLLNGAKTFITQGTVGDTFVVLAN 181

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNV 304
            E  R    +   +LE G+  G   + +  K+G RS+ T EL   E        LG++N 
Sbjct: 182 TEPERKQHGITAFVLEKGA-KGFSQRPIHGKLGMRSSDTAELHLDEVEVPDAQRLGEVN- 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
             G V  ++IL   D   +++  + V LA     E+  YA+ R   G  + +   +   +
Sbjct: 240 -QGFVNTLQIL---DRGRITIGALAVGLARGALEESRAYAKERRTFGRPIAEHQAVAFML 295

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++AAA  L  R A   D  +    EA+ A++ A        + A     +A++  
Sbjct: 296 ADVATEVAAARLLVHRAAALCDAGEPFGAEASMAKLFA-------SEAAMRATTKAVQIH 348

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY  +  + R++R++    I  G+
Sbjct: 349 GGYGYTRDFPVERYFRDAKLTEIGEGT 375


>gi|237713780|ref|ZP_04544261.1| acyl-CoA dehydrogenase [Bacteroides sp. D1]
 gi|262409314|ref|ZP_06085857.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644960|ref|ZP_06722694.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294805964|ref|ZP_06764831.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229446227|gb|EEO52018.1| acyl-CoA dehydrogenase [Bacteroides sp. D1]
 gi|262352766|gb|EEZ01863.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639681|gb|EFF57965.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294446846|gb|EFG15446.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 568

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 36/343 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      DG + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ +     FE +
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETI 466

Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
             + E + L S  KK+      S +  KE  D+ L  F   K+
Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEVQDQELLDFTARKL 509


>gi|15600213|ref|NP_253707.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107104120|ref|ZP_01368038.1| hypothetical protein PaerPA_01005193 [Pseudomonas aeruginosa PACS2]
 gi|218894119|ref|YP_002442988.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254238271|ref|ZP_04931594.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719]
 gi|254244096|ref|ZP_04937418.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192]
 gi|9951307|gb|AAG08405.1|AE004914_6 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126170202|gb|EAZ55713.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719]
 gi|126197474|gb|EAZ61537.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192]
 gi|218774347|emb|CAW30164.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 600

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 46/308 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +  +DG Y + G+K F+S    P+S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGSYRIKGNKIFISGGDHPLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L +     G  N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           +     G+L+G     L      + + +I + + + ++  +G   SL     YAR R   
Sbjct: 271 DNGACVGYLVGKPHHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQG 326

Query: 343 HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            +  G     P              + ++A  + A D+    A  F  + + ++ + R +
Sbjct: 327 RLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQ 386

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+  
Sbjct: 387 AHDLLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHG 446

Query: 449 AMVLDVLN 456
              LD+L 
Sbjct: 447 IQSLDLLG 454


>gi|71282231|ref|YP_267920.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71147971|gb|AAZ28444.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 598

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +   DG Y L+G K F+S+   D       I++A++ G     
Sbjct: 164 LTEPHCGTDLGMLRTKAELNDDGSYSLTGTKIFISAGEHDLSDNIVHIVIARIPGSPEGS 223

Query: 253 --VGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+       E    N +    +++K+G  +NAT  + F    G+L+G++N  
Sbjct: 224 KGISLFIVPKFNVTNEGETSDRNAVNCGSIEHKMGINANATCVINFDGAKGYLIGEVNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +     +  L  A   V+    S   A+ YA+     R +SG          +I  P
Sbjct: 284 LNCMFTFMNVARLGVATEGVAAAEASFQGALAYAKDRLQMRSLSGVKNPDGPADAIIVHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++R +           AL   LA   D   A +  EE A A     ++ PI K +  ++
Sbjct: 344 DVRRMLLTQKSIAEGGRALIAYLAQLVDIGHASTCEEEKATAEAKLALLTPIAKAFLTEL 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                +  ++  GG G+I+E  + +  R++  + +  G+     LD+L
Sbjct: 404 GLECTSHGVQVFGGHGFIKEWGMEQLMRDTKISCLYEGTTGIQALDLL 451


>gi|226305373|ref|YP_002765331.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184488|dbj|BAH32592.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E + G+D AA++ +    +DG Y ++G K W  +   +D + + A+   +G  G  C 
Sbjct: 127 LSEAQAGSDAAALSCKA-TATDGGYRINGSKAWITNGGKADFYNLFARTSDDGSRGISCL 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LV     D    GL + + + K+G R+  T    + + F   + D  +     + + I  
Sbjct: 186 LV-----DKDTEGLSFGKPEEKMGLRAVPTASANYDDAF---VPDERLIGQRGQGLPIAF 237

Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++ + V +A+     A+ YA+ R   G  +ID   +   +AD+A  + +A 
Sbjct: 238 SALDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                 A   D A+ R     Y+R  A + K      A  V  +A++  GG GY ++  +
Sbjct: 298 ------ATYLDAARRRDAGVPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPV 350

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I  G+
Sbjct: 351 ERYMREAKITQIFEGT 366


>gi|225717626|gb|ACO14659.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Caligus clemensi]
          Length = 411

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 44/266 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           LTE   G+D  A ++  +   DG Y  L+G K W  ++P + + ++ A  +       + 
Sbjct: 151 LTEPGNGSDAGAASTMAKISKDGSYFILNGTKAWITNAPEAKSMVVFATTDSSLKHKGIT 210

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F+VP+ L      G+   + ++K+G R ++T  +        +L D+ V   P E +  
Sbjct: 211 AFIVPKDLP-----GVGLGKKEDKLGIRGSSTSNV--------ILEDVEV---PKEYVLG 254

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           K+ +    A+ ++ G R+ +A             A+ YA +RH  G  +    +++  IA
Sbjct: 255 KLGMGFKIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRHSFGTAIAKLQMVQSKIA 314

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D++  + A+  L +R A + D     ++EAA +++ A  T  W       V  ++++ +G
Sbjct: 315 DMSTRVEASRLLLYRAAAAKDAGMPFTKEAAMSKLFASETATW-------VAHQSIQVLG 367

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G++ +    R+YR++    I  G+
Sbjct: 368 GMGFVTDMPSERNYRDARITEIYEGT 393


>gi|297195300|ref|ZP_06912698.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719618|gb|EDY63526.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 383

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 57/308 (18%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   T    +DW P++ S E              A+G  GLTE   G+D   + ++
Sbjct: 95  AKTVAAHGTEEQKRDWLPRLTSGE--------------ALGCFGLTEPGTGSDAGNLITR 140

Query: 218 GQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270
              ++DG  Y ++G K F+++   +D  ++ A+     G      FLVP         GL
Sbjct: 141 --AVADGGDYVINGSKMFITNGTWADVVLLFARTNDTPGHKGVSAFLVPT-----DTPGL 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIM 323
             + +  K+G R  AT EL        +L D+ V      GP E     I + +     M
Sbjct: 194 TRRTVHGKLGLRGQATAEL--------VLEDVRVPAAAMLGP-EGKGFSIAMSALAKGRM 244

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           SV+   V +A+A     + YA+ R   G  +    +++  ++D+A+D+ AA  L++R+A+
Sbjct: 245 SVAAGCVGIAQAALDAAVGYAKEREQFGRSIAHYQLVQELLSDVAVDVDAARLLTWRVAD 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  +  A+ A++ A        + A      A++  GG GYI+E  + +  R++ 
Sbjct: 305 LIDRGQQFATAASQAKLFA-------SEAAVRSANNALQVFGGYGYIDEYPVGKLVRDAR 357

Query: 439 ANSILLGS 446
             ++  G+
Sbjct: 358 VMTLYEGT 365


>gi|219363163|ref|NP_001136884.1| hypothetical protein LOC100217040 [Zea mays]
 gi|194697474|gb|ACF82821.1| unknown [Zea mays]
          Length = 390

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 31/291 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P     + PK+ S E+              IG L ++E   G+D+ ++  + +K+ DG 
Sbjct: 112 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 156

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +   ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 157 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 215

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++   +  M+  L   + Y R
Sbjct: 216 SDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 275

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A   
Sbjct: 276 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                + A  V  +A++C+GG+GYI E    R  R+  A    +G+G + V
Sbjct: 333 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 377


>gi|332992797|gb|AEF02852.1| Acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 599

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 166/408 (40%), Gaps = 65/408 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++   M  +    T  +   + PK+ S E+  T             + LTE   G+
Sbjct: 125 MYPGLSQGCMETIKAHGTETLQNQYLPKLISGEWTGT-------------MCLTEAHCGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  +  + +   DG Y L+G K F+S+   D       I+LA++ G       +  F+V
Sbjct: 172 DLGMLKCRAEPQDDGSYSLTGTKIFISAGEHDMSENIVHIVLARLPGAPEGTKGISLFVV 231

Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  + ++G     NG+    +++K+G +++AT  + F    GFL+G  N     +    
Sbjct: 232 PKFNVSDEGEKLDRNGVACGSIEHKMGIKASATCVINFDGAKGFLIGQPNRGLNCMFTFM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355
               + + +  ++    S   A+ YA+ R     ++G    D P              + 
Sbjct: 292 NTARIGTGLEGLAASEASFQGALRYAKDRIQFRSLTGRKNQDGPADPIIVHPDVRRMLLT 351

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++A A+    +AA       +    D+A+ ++        + PI K +  + A    +  
Sbjct: 352 QKAFAEGNRALAAYCMQLVDVTLYGDDAQEKTLADTKLAFLTPIVKAFLTETAQESTSYG 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           M+  GG G+I+E  + +  R++   ++  G+     +D+L                  + 
Sbjct: 412 MQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLG----------------RKV 455

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523
           +GS+G+ +   +++    C+  +G A+F     AL S      +  MN
Sbjct: 456 MGSNGELLNVFVQEVREYCESLRGKAQFSAWTNALTSHLDEWQQLTMN 503


>gi|229584191|ref|YP_002842692.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019240|gb|ACP54647.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 371

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGIYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A  ++  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|187926711|ref|YP_001893056.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665043|ref|YP_002983402.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187728465|gb|ACD29629.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867070|gb|ACS64730.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 385

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 37/277 (13%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           D+ P+I S E             + I   LTE   G+D A++ ++     D  Y ++G K
Sbjct: 108 DYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATLDGDH-YVINGTK 153

Query: 233 WFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            +++ +P + AF ++A+  G     +  F+VP         G+   +   K+G R   T 
Sbjct: 154 RYITNAPRAGAFTLMARTGGEGASGISAFIVP-----ADTPGITLGKPDKKMGQRGTKTC 208

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
           ++   N       ++G +    G    MK+L   D   + +S +   +A     +A+ YA
Sbjct: 209 DVMLDNVRVPAANIIGGV-AGQGFKTAMKVL---DRGRLHISALACGMAHRLITDAVAYA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + D  +++  +AD   ++ A  ++    A  +D AK   ++     ++A  
Sbjct: 265 KERKQFGQPIADFQLIQAMLADSQAELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASC 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           TK +C +M   V   A++  GG+GYI E    R YR+
Sbjct: 324 TKMFCTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360


>gi|330956958|gb|EGH57218.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 592

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +   D  Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGMIRTRAEPQPDDTYRITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSVGERNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ--------P 353
              +  M     L   I  ++    S   AI YA    + R  +G    D+        P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAIEYALDRIQSRAPTGAQNTDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   ++ A  R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSDDDTARKRADDLVALLTPVAKAFLSDI 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+N  F 
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAFY 465

Query: 467 QLFS 470
           QLFS
Sbjct: 466 QLFS 469


>gi|330812184|ref|YP_004356646.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380292|gb|AEA71642.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 592

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ + +     G+ N      +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   AI YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   +     R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPVTRKRAEDLVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+   F 
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465

Query: 467 QLFS 470
           +LF+
Sbjct: 466 KLFA 469


>gi|251779321|ref|ZP_04822241.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243083636|gb|EES49526.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 379

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +K  D  Y L+G K F+++ P+S+ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +++NK G +S    EL F N     +   N+     +   I +  
Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENC---KVPAENLVGAEGKGFGIAMKA 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +AE     A  Y + R   G  L     +   +A++ L+I  A  +
Sbjct: 239 LDGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAKYI 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A    E +  S  AA A++        C  +A  V  E+++ +GG+GY++E ++ R
Sbjct: 299 LYKAAMDKQEGRPYSVSAAKAKLS-------CTDVAMKVTVESVQMLGGNGYMKEYNVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKITQIYEGT 365


>gi|283798801|ref|ZP_06347954.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1]
 gi|291073488|gb|EFE10852.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1]
 gi|295092704|emb|CBK78811.1| Acyl-CoA dehydrogenases [Clostridium cf. saccharolyticum K10]
 gi|295114947|emb|CBL35794.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SM4/1]
          Length = 384

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 39/277 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD  A   Q + + DG  + L+G K F+++   +D ++++A
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKIFITNGKEADIYVIIA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NT 294
                    GR    +   ++E G+P G  +   + K+G R +AT EL F+       N 
Sbjct: 171 VTGTKEDARGRKKKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDCRIPKENL 229

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGIL 349
            G      N++         +  LD   + ++   + LAE      I Y + R   G  L
Sbjct: 230 LGQQGKGFNIA---------MHTLDGGRIGIAAQALGLAEGALERTIEYVKERKQFGRAL 280

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +AD+A  + AA  L +R A +    K+ S EAA A++       +  ++A 
Sbjct: 281 GQFQNTQFQLADMATKVKAAQLLVYRAAMAKATQKTYSVEAAMAKL-------YAAEVAM 333

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            V  +A++  GG GYI E  + R  R++    I  G+
Sbjct: 334 EVTTKAVQLHGGYGYIREYDVERMMRDAKITEIYEGT 370


>gi|146305598|ref|YP_001186063.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573799|gb|ABP83331.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 622

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ------ 248
           + LTE   G+ ++ I ++ +  +DG Y + G+K F+S    P+S+  +  +LA+      
Sbjct: 183 MALTEPHAGSSLSDIRTKAEPHADGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPP 242

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  FLVP+    +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 243 GVKG-ISLFLVPKFHVNDDGSLGARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 301

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------I 348
           G     L+     + + +I + + + ++  +G   SL  A +  + R   G         
Sbjct: 302 GKPHAGLSYMFQMMNEARIGVGMGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPTSPQIS 361

Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +++   ++R      A  + A D+    A  F    + + A+ R+       ++ PI K 
Sbjct: 362 IVEHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTQTLETAEDRTRALELLDLLTPIVKS 421

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L
Sbjct: 422 WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLL 474


>gi|297819030|ref|XP_002877398.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323236|gb|EFH53657.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K+ DG Y L+G+K W  + P ++  ++ A+ + + G   +
Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F N F   + + N+     + + +L+  
Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENIIDKEGKGVYVLMSG 266

Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L+  ++S      M+  L   + Y R+R   G  + +   ++  +AD+   + ++ + 
Sbjct: 267 LDLERLVLSAGPLGIMQACLDTVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GYI E +  R
Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 380 LLRDAKLYEIGAGT 393


>gi|167769780|ref|ZP_02441833.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM
           17241]
 gi|167668141|gb|EDS12271.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM
           17241]
          Length = 664

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE+  G+D A  T     +    Y L+G K F++ +P SD +++ A     +G   +
Sbjct: 151 FGLTEQNAGSD-AGGTETTAVLKGDYYLLNGSKIFITNAPKSDIYVVFAVTTPDIGTRGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +    +K+G RS++T EL F++     +   N+     E  KI +  
Sbjct: 210 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMAT 266

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   IAD+A  +  A  L
Sbjct: 267 LDGGRIGIAAQALGIAQGAFEHAVEYAKERIQFGKPIAFQQALSFKIADMATKLRCARML 326

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   +       E+A A++       +   +A  V  +A++  GGSGY++   + R
Sbjct: 327 IYSSAELKEHHVPYGMESAMAKM-------YASDIALEVTNDALQIFGGSGYLKGMEVER 379

Query: 433 HYRESPANSILLGS 446
            YR++   +I  G+
Sbjct: 380 AYRDAKITTIYEGT 393


>gi|11498279|ref|NP_069505.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304]
 gi|2649946|gb|AAB90570.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304]
          Length = 414

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 35/319 (10%)

Query: 147 EAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           E G L +    S +MV+++     R  ++W  + F +        P+ K       GLTE
Sbjct: 79  EVGVLGNGIGCSYAMVSIVGEAIYRFGQEWQKEEFLK--------PIIKGKKVSAEGLTE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE------GRVGCFL 257
            RGG+D    T++ +K  + ++ L+G K F++   ++D +++ A+ +        +  FL
Sbjct: 131 PRGGSDFFGTTTRAEKKGN-VWVLNGAKRFIAGGKVADFYLIYARTDPTAPGHKALTAFL 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +      G+  + L N +G R   T  + F +      + LG++N +      M I
Sbjct: 190 VERDM------GVEVEELYNLLGFRGMGTARIVFKDVEVPDEYRLGEVNGARVIFNRMMI 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + SA  ++   R +L  A+ Y+ +R   G  + +   +   +A+    + AA AL++
Sbjct: 244 PERMTSAAGALGTARAALEVAVKYSNKRKAFGRKIREFQGVNFMVAEAVTKLDAARALTY 303

Query: 375 ---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              R  + +D  K         R +    KY+   +   V+ +AM+ +GG GY +   + 
Sbjct: 304 NAARAVDLYDAGKGPD-----PRRLVSEAKYFATDVGWDVVNKAMQILGGIGYTQVYPVE 358

Query: 432 RHYRESPANSILLGSGNAM 450
           R  R+     I  GS   M
Sbjct: 359 RMLRDMRLAPIWTGSNEIM 377


>gi|304312977|ref|YP_003812575.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium
           HdN1]
 gi|301798710|emb|CBL46943.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium
           HdN1]
          Length = 382

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 15/258 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + ++  +  D  Y ++G K F++S     +  +A   G  G   + 
Sbjct: 127 LAITEPSGGSDVARLKTRAVREGD-YYRVTGSKTFITSGYYADYYTVAVRTGSEGYGGIS 185

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL +    G    R   K+G  ++ T EL F +       L+G  N+    +     + 
Sbjct: 186 LLLIEKGTLGFSVGRKLKKMGWWASDTAELFFDDCKVPVANLIGAENMGFYAIMSNFQME 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L+ A+M+    +++L E++ Y   R   G  L    V++  +A++A  +  A   ++R+
Sbjct: 246 RLNLAVMAYMTAQLALEESLRYVHEREAFGKPLAKFQVLRHKLAEMATKVEVAKEYTWRI 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A       S  +E + A       K +   ++  V  EA++  GG G++ E  + R YR+
Sbjct: 306 AARIQAGDSVVKEISMA-------KNFATSVSDYVTYEAVQIFGGMGFMRETLVERLYRD 358

Query: 437 SPANSIL-LGSGNAMVLD 453
              N IL +G G A +++
Sbjct: 359 ---NRILAIGGGTAEIMN 373


>gi|299768808|ref|YP_003730834.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698896|gb|ADI89461.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 600

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I S+ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFHVNADGTVGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKDADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++  + +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRISCLYEGTTEIQALDLL 453


>gi|170694994|ref|ZP_02886143.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170140092|gb|EDT08271.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 600

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 40/310 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D++ + ++ +    G Y ++G K F+S    D       ++LA++       
Sbjct: 165 LTEPDSGSDLSRLRTRAEPDEQGSYRITGTKIFISGGDHDLTENIVHLVLARLPDAPPGT 224

Query: 253 --VGCFLVPRLLEDG--------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +  F+VP+L+ D         S N +    +++K+G R++AT  L F    G+++G  
Sbjct: 225 RGISLFVVPKLIPDSATGEVAPDSDNLVSTGAIEHKMGIRASATAVLNFEGARGWMIGQP 284

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------------VSGGILI 350
           N     +  M     +  A+ SV    +S   A+ YA+ R              +   +I
Sbjct: 285 NGGLRAMFTMMNSSRIGVAVQSVGVSEISYQNALAYAKERRQGKAPGHCGEQRATPDAII 344

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI--MAPITKYWC 404
           D P ++RA+  + + +    AL    A   D    +  S   EAA +R+  + P+ K + 
Sbjct: 345 DHPDVRRALLTMKVLVEGIRALYVESAMLLDVRASQPDSTEGEAAESRLALLTPVLKSFI 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG 461
              A  +    ++  GG GY+ E  +   +R++    +  G+     LD++     LE G
Sbjct: 405 SDCAVQITDLGVQIHGGYGYVHETGMEHLFRDARIVPLYEGTNGIQALDLVTRKIGLEDG 464

Query: 462 TNLFEQLFST 471
             L   L ST
Sbjct: 465 RVLDAWLAST 474


>gi|121609052|ref|YP_996859.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553692|gb|ABM57841.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 605

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 51/294 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + ++ +  +DG Y L G K F++    D       ++LA+V G   
Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQADGSYKLFGTKIFITYGEHDMAENIVHLVLARVPGAPE 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+ P+ L  +DGS    N +    +++K+G +++ T  L+F    G + GD  
Sbjct: 221 GVKGLSLFVCPKFLVRQDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGAGPG-VAGD-- 277

Query: 304 VSTGP-------------VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGG 347
            STGP             +E M I++      + + G+ +S     +A+ YAR R  S  
Sbjct: 278 -STGPGAVSHLVGQENRGLEYMFIMMNAARYAVGMQGIAISERAYQKAVQYARERVQSRP 336

Query: 348 I---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAY 392
           +         +I  P ++R +  +   I    AL+   A +FD      +A+ R    A 
Sbjct: 337 VDGSGNASIAIIGHPDVQRMLMTMRAGIEGCRALATVAAAAFDTAQHHPDAQIRQHNRAC 396

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              M P+ K +C + +  +   A++  GG G+IEE   A++YR++   +I  G+
Sbjct: 397 YEFMVPLVKGYCTETSLELTCLALQVHGGMGFIEETGAAQYYRDARILTIYEGT 450


>gi|227827022|ref|YP_002828801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227458817|gb|ACP37503.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
          Length = 371

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A  ++  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|229578811|ref|YP_002837209.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|229582443|ref|YP_002840842.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238619167|ref|YP_002913992.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|228009525|gb|ACP45287.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228013159|gb|ACP48920.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238380236|gb|ACR41324.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 371

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 37/276 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A  ++  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++  GG GY +  +I R YR+  A  + +G G   V
Sbjct: 321 LQVFGGMGYAKGTTIERIYRD--ARLLRIGEGTDEV 354


>gi|332521255|ref|ZP_08397711.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332042983|gb|EGI79181.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 390

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE  GG+D+A + +   K  D  Y L+G K F+++ + SD  ++ A+    +G   +
Sbjct: 125 MAVTEPFGGSDVAGMRTTAVKKGD-TYVLNGSKTFITNGVYSDYIVVAAKTSPELGNKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + D    G+   +L +K+G R++ T E+ F N       L+G+       +      
Sbjct: 184 SMFIVDRDAKGVSATKL-DKLGWRASDTGEIAFDNVTIPASHLMGEEGKGFPYIMQHFAF 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   I + +    +L  A+ Y   R   G  +     ++  +AD   D+      ++ 
Sbjct: 243 ERLIMGINAHARAEFALEYAVKYMGERQAFGKSIDKFQALRHTMADCFADMEVCKEFNYT 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A   D+ +   +EA        I+K    KMA  VI + ++ +GG GY+EE  +AR  R
Sbjct: 303 VAARLDKNEYVVKEAT-------ISKLRSTKMADEVIYQCLQMLGGYGYMEEYPMARLLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|294786063|ref|ZP_06751348.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|294486285|gb|EFG33650.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 636

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|237745307|ref|ZP_04575788.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1]
 gi|229432536|gb|EEO42748.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1]
          Length = 637

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|150019864|ref|YP_001312118.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149906329|gb|ABR37162.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 634

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGDYYILNGEKIFITNGGEADIYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  + +  +K+G RS+AT EL F++     +   N+    
Sbjct: 172 TTPNIGTRGISAFIVEKGSEGFSFGKHYDKMGIRSSATAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERVQFGKPICQQQIIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A      +  S EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 ATKLRAARFLIYSAAELKGNHEHYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|326498703|dbj|BAK02337.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 18/285 (6%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226
           H +       R   PT K    P   +   IG L ++E   G+D+ ++  + +K+ DG Y
Sbjct: 145 HSNLCINQLVRHGSPTQKEKYLPKLISGDHIGALAMSEPNSGSDVVSMKCKAEKV-DGGY 203

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G+K W  + P +   ++ A+ +   G   +   ++E G P     Q+L +K+G R +
Sbjct: 204 VINGNKMWCTNGPSAQTLVVYAKTDITAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRGS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341
            T EL F N F      L      V  M   + L+  +++   +  M+  L   + Y R+
Sbjct: 263 DTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVLAGGPIGLMQACLDVVLPYVRQ 322

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A    
Sbjct: 323 REQFGRPIGEFQFLQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA---- 378

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + A  V  EA++C+GG+GYI E    R  R++    I  G+
Sbjct: 379 ---AERATQVALEAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGT 420


>gi|323476742|gb|ADX81980.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 371

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A  ++  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|262201223|ref|YP_003272431.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084570|gb|ACY20538.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 379

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 30/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+  +   ++DG Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALNCRA-VVADGGYRINGAKAWITHGGIADVYNVFARTGEGSKGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R       +GL + + ++K+G  +  T    + +    +  D  + T   E   + I 
Sbjct: 186 VAR-----DTDGLRFGKPEDKMGLHAVPTTAANYDDAL--VDADRLIGT---EGQGLPIA 235

Query: 318 ---LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LDS  + ++ +   LA+A     + YA+ R   G  +ID   +   +AD+A  + +A
Sbjct: 236 FSALDSGRLGIAAVATGLAQAALDAAVEYAQERTTFGRKIIDHQGLSFVLADMAAAVDSA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A     A   D   + S  AA A+++A          A  V  +A++  GG GY  +  
Sbjct: 296 RATYLDAARRRDAGMTYSRAAATAKLVA-------TDAAMKVTTDAVQVFGGYGYTRDFP 348

Query: 430 IARHYRESPANSILLGS 446
           + R+ RE+    I  G+
Sbjct: 349 VERYMREAKITQIFEGT 365


>gi|297204601|ref|ZP_06921998.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710669|gb|EDY54703.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 380

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 47/302 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP     W P + S E                 L L+E   G+D+ AI +  ++  D 
Sbjct: 102 LTTPEQKARWLPGVISGE-------------TICALALSEPSAGSDLKAIRTTARRDGDE 148

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + + G K F+++  ++D  I+  + +   G   +  ++ +    G    R  +K+G ++
Sbjct: 149 -WVIDGSKTFITNGILADLVIVACKTDPEAGHKGISLIVVERGAEGFERGRKLDKVGMKA 207

Query: 284 NATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             T EL F                 F  ++G+L     P E + I      A+ S++   
Sbjct: 208 QDTAELFFHEVRVPAENLIGEEGRGFYHMMGNL-----PTERLAI------AVSSLAAAE 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YA+ R   G  + +    + A+ADI   + AA         +  + +  ++E
Sbjct: 257 RAYVLALDYAKTRTAFGQPIGEFQANRFALADIRAKLNAARVYVDGCIMALFQGELTADE 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       KYW  +    VI   M+  GG GY+ E  IAR +R+S    +  G+   
Sbjct: 317 AAAA-------KYWTSETGWEVIDRCMQLFGGYGYVNEYEIARIWRDSRVQRVFGGTSEI 369

Query: 450 MV 451
           M+
Sbjct: 370 ML 371


>gi|148545434|ref|YP_001265536.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148509492|gb|ABQ76352.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 393

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|70996198|ref|XP_752854.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66850489|gb|EAL90816.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159131607|gb|EDP56720.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 437

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K +DG Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 178 LSEPASGSDAFALQTKAEKTADG-YKLNGSKMWITNSMEAGVFIVFANLDPSKGYKGITA 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMK 313
            + +    G    + + K+G R+++T  L F +     G LLG+       + G + + +
Sbjct: 237 FVVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGR 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I      +++ G   + A  +   RR+   G ++     M+  +A   ++IAAA AL 
Sbjct: 297 IGIAAQMTGLAL-GAWENAASYVWNDRRQF--GQLIGTFQGMQHQLAQAYVEIAAARALV 353

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +   ++AA A++       +  ++A  V + A+E +GG G++ E    + 
Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVASSAVEWMGGMGFVREGIAEKM 406

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +  LL+K
Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|323474188|gb|ADX84794.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
          Length = 371

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A  ++  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|325676123|ref|ZP_08155804.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553033|gb|EGD22714.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 385

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 21/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV------EG 251
           + +TE   G+D+A I +     +DG  Y L+G K F++   ++D  +++ +       + 
Sbjct: 124 IAMTEPGTGSDLANIGTTAVLSADGSHYVLNGAKTFITGGALADLVLVVCRTSPSTPEDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R G  +   L  D +  G    R  +KIG +++ T EL F++     G  LG+   +   
Sbjct: 184 RAGLTI---LAVDTTSEGFAVGRKLHKIGLKASDTAELSFTDVEVPVGDRLGEEGAAFTY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+   +  R +L  AI Y + RHV G  +      K  +A+ A D+ A
Sbjct: 241 LTHNLAQERLSIALGGAATARAALQHAIAYVKDRHVFGKPVASFQNTKFVLAECATDVEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            T ++ R     D  +    +AA A++       +C + A  VI + ++  GG GYI E 
Sbjct: 301 ITLMADRALELHDADELSVADAAKAKL-------FCTETAGKVIDKCLQLHGGYGYITEY 353

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR Y ++  + I  G+   M
Sbjct: 354 PIARLYADTRVSRIYGGTSEVM 375


>gi|226361951|ref|YP_002779729.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240436|dbj|BAH50784.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 32/287 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W P I S E               I + ++E   G+D+ AI +  ++   G + ++G
Sbjct: 110 QKRWLPDIVSGER-------------TIAVSMSEPGTGSDLRAIKTTARREGSG-WRITG 155

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F++S M +D  I+ A++    G      ++EDG P G    R  +KIG ++  T EL
Sbjct: 156 SKTFVTSGMQADLVIVAARIPDEDGGGFGLFVVEDGQP-GFERGRKLSKIGRKAQDTAEL 214

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F N     +   NV     + ++ L+       L  A+++V+    +L  A+ YA+ R 
Sbjct: 215 FFQNV---EVQPENVLGEAGKGLRYLMANLAQERLSMAVVAVASAEYALELALSYAKERR 271

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      +  +A+++  +  A     R  ++    +  + +AA A       K+W
Sbjct: 272 AFGSPIGSFQANRFTLAELSTKVQIARIYLDRCLDAHGNGELTAADAAGA-------KFW 324

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++    +   ++  GG GY+EE  +AR +R+S    I  G+   M
Sbjct: 325 TTELEFEALDTCLQLHGGYGYMEEYEVARRWRDSRVQQIYGGTNQIM 371


>gi|197119937|ref|YP_002140364.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197089297|gb|ACH40568.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 380

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 31/258 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGC--F 256
           ++E   G+D+A+I +   +  D  Y ++G K F  + P++  + +LA+    GR G   F
Sbjct: 124 VSEPGAGSDVASIRTTAVREGDE-YVINGTKVFSTNGPVASVYTVLARTSENGRNGLSFF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R        GL   +++ K+G R + T E+   N     G LLG+ N   G    MK
Sbjct: 183 LVER-----GTAGLSVGKIEKKLGQRGSKTSEMYLDNVRIPAGNLLGEEN--KGFHLAMK 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                D +  ++    + +A+      + ++R R   G  L +  ++++ IAD A  I A
Sbjct: 236 ---DFDMSRPAIGAQALGIAQGAFDQMVRHSRERKTFGQQLCEHQMIQQIIADSATKIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L +R +  +D+ +  ++       +A + K +    A  +  +A++  GG GY+++ 
Sbjct: 293 SRGLIYRASALYDKGQRNTK-------LASMGKLFASDAAMQITTDAIQVFGGYGYMQDY 345

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 346 PVERMFRDAKLTQIFEGA 363


>gi|91790023|ref|YP_550975.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91699248|gb|ABE46077.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 376

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVG-----C 255
           LTE   G+D +++ +   K  DG Y ++G K F++S  +  A I++A  +   G      
Sbjct: 123 LTEPHVGSDASSLKTAAVKDGDG-YVINGVKQFITSGKNGHAAIVIAVTDKGAGKKGMSA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308
           F+VP         G    RL++K+G  S+ T ++ F N         G       ++ G 
Sbjct: 182 FIVPT-----DAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIGAEGEGYRIALGA 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  SV   R +   A+ YA+ R   G  + +   +   +A+ A  + A
Sbjct: 237 LEGGRIGI----AAQSVGMARSAFEFALGYAKERQSFGTAIFNHQAVGFRLAECATKLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  D  +   +EAA A++ A        +MA  V + A++ +GG GY+ + 
Sbjct: 293 ARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAEEVCSAAIQTLGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRVCQIYEGTSD 365


>gi|260495500|ref|ZP_05815626.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|260197037|gb|EEW94558.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
          Length = 637

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|126434102|ref|YP_001069793.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233902|gb|ABN97302.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 379

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 48/301 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT      W P  F+R  + T             LGLTE   G+D+AAI +  ++  D 
Sbjct: 102 LTTAEQRDRWLPA-FTRGENVT------------ALGLTEPGAGSDLAAIKTSARRDGDH 148

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           +  L+G K F++S  + D  I+L +   R G       +E+G+P G    R  +KIG R+
Sbjct: 149 L-VLNGQKTFITSGATCDLAIVLVRTGERDGRGTTFVAVENGTP-GFERGRPMHKIGRRA 206

Query: 284 NATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             T EL F +               FG  + +L     P E + I +   ++        
Sbjct: 207 QDTAELFFDDCRVPVSNIVGEPGRGFGCAIANL-----PRERLSIAVAAVASARH----- 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + +AR+R   G  L     ++  IA++  DI        R   + ++ +  + E
Sbjct: 257 -ALELGLEHARQRSAFGAPLAQLQSVRMQIAEMHTDIVVLQEYVDRCVVALNDGELTAAE 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       KY   ++   V+   ++  GG GY+EE  IAR +R++    I  G+   
Sbjct: 316 AAGA-------KYKATELQWEVLDRVLQLFGGYGYMEEYPIARMWRDARIQRIYGGANEV 368

Query: 450 M 450
           M
Sbjct: 369 M 369


>gi|182439898|ref|YP_001827617.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780564|ref|ZP_08239829.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178468414|dbj|BAG22934.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660897|gb|EGE45743.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 390

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257
           L+E   G+D A++ ++  +  D         W     ++D + +LA+  VEG  G   FL
Sbjct: 133 LSEPASGSDAASLRTKAVRDGDDWVITGTKAWITHGGVADFYTVLARTGVEGPRGITAFL 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T +L F    G  +GD        +   I L 
Sbjct: 193 VP-----GDAEGLNAAVPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIALS 244

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   + LA     EA+ YA  R   G  + D   ++  +AD+A  I A  A
Sbjct: 245 ALDSGRLGIAACAIGLAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S +AA A       K +C   A  V  +A++ +GG GY  +  + 
Sbjct: 305 LYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVE 357

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I+ G+
Sbjct: 358 RLMREAKVLQIVEGT 372


>gi|26986902|ref|NP_742327.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24981507|gb|AAN65791.1|AE016205_4 glutaryl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 393

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|330790553|ref|XP_003283361.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum]
 gi|325086786|gb|EGC40171.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum]
          Length = 419

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 25/258 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  ++ ++  K  DG + L+G K W  ++  +  FI++A V+   G   +  
Sbjct: 160 LSESGSGSDAFSLATRATKQPDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITA 219

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            + + S  GL   + ++K+G R+++T E+   N   +   +LG L       +  KI I 
Sbjct: 220 FIVESSNPGLKIGKKEDKLGIRASSTCEVILDNCVVSSDSILGQLG------KGYKIAIE 273

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + ++   + LAE      I Y   R   G  + +   M+   AD+A+DI AA  
Sbjct: 274 GLNEGRIGIAAQMLGLAEGVFESTIPYLMERKQFGKPIAEFQGMQFTYADLAIDIEAAKL 333

Query: 372 LSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L++  A        R +EA    +  A + K +  ++A    +  +  +GG G+ +E   
Sbjct: 334 LTYNAA--------RMQEAGLPFVHQASMAKLYASRVAEKTASACISMLGGVGFTKEFPA 385

Query: 431 ARHYRESPANSILLGSGN 448
            + +R+S    I  G+ N
Sbjct: 386 EKFFRDSKVGQIYEGTTN 403


>gi|302185797|ref|ZP_07262470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|237741102|ref|ZP_04571583.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|229430634|gb|EEO40846.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13]
          Length = 636

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|186472764|ref|YP_001860106.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195096|gb|ACC73060.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 596

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 173/390 (44%), Gaps = 70/390 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S ++  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGDWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + ++ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSYRIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L   DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVHADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ +S        A A    + R V G       +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           ++ +      + AL++  A       +  D+AK R+E  A    + PI K W  +++  V
Sbjct: 348 LSTMRALTEGSRALAYVAAAHSDIAHHHADQAK-RAEHLAIYEYLVPIVKGWSTELSVDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            +  ++  GG G+IEE   A++YR++    I  G+      D++               T
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGR------------KT 454

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           L +D G+  K ++  +  ++   K+ KG A
Sbjct: 455 L-RDGGAVAKALLADIAQTVEALKQHKGAA 483


>gi|256846241|ref|ZP_05551698.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256718010|gb|EEU31566.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 636

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|206890770|ref|YP_002248410.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742708|gb|ACI21765.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 39/267 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC- 255
           +   LTE   G+D   I +   K  D  Y L+G K W  +   ++ + ++A  +   G  
Sbjct: 120 VAFALTEPNAGSDAGGIQTTATKDGD-YYILNGRKQWITNGGEAEIYTVIALTDKSKGAR 178

Query: 256 ----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
               F+V    E G+P G  + + +NK+G R++AT EL F        N  G        
Sbjct: 179 GASAFIV----EKGTP-GFSFGKKENKMGIRASATRELIFEDCKIPKENMLG------RE 227

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
             G +  MK    LD + + V    + +A     EA  +A++R   G  +I    ++  +
Sbjct: 228 GMGFIVAMKT---LDQSRVGVGAQGLGVAQGAFEEAAKFAKQRVQFGQPVISFQAVQHML 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ I AA AL + +A   D   S +++   A  MA   K +   +A  V  +A++ +
Sbjct: 285 ADMAIQIEAARALIYSVARYID---SGAKDITKASAMA---KTFATDVAMKVTVDAVQVM 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GGSGY+++  + +  R++    I  G+
Sbjct: 339 GGSGYMKDYPVEKMMRDAKILQIYEGT 365


>gi|71737907|ref|YP_276816.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558460|gb|AAZ37671.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTST-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G+ G + +      ++   ++ G    LT K+ +A+
Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509


>gi|127513092|ref|YP_001094289.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638387|gb|ABO24030.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 596

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 41/304 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD+A + ++ + + +  Y +SG K F+SS   D       ++LA+      
Sbjct: 162 MNLTEAHAGTDLALLRTKAKPVGEDTYAISGEKIFISSGDHDLADNIVHLVLARLPDAPD 221

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  F VP+ L  +DG+    NG+    L++K+G   N+T  + F    G L+G+ 
Sbjct: 222 GVKG-ISLFAVPKYLVNDDGTLGCRNGVEASALEHKMGIHGNSTCVMVFDGAIGELVGEP 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG---------GIL 349
           +     +  M     L   +  +    ++   A+ YAR     R +SG          IL
Sbjct: 281 HQGLRAMFTMMNEARLGVGVQGLGVSEIAYQNALSYARERLQGRALSGVKESESPADPIL 340

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYW 403
           +   V +  +A  A +   A AL  + A   DE+    ++      A  A +  P+ K +
Sbjct: 341 VHGDVRRMLMAQKAFN-QGARALMGQQALWLDESHRHQDKAKATIAAKLAALFTPVVKGF 399

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
                     +A +  GG GYI E  + +  R+S    I  G+     LD++    L +K
Sbjct: 400 VTDQGFKACVDAQQVYGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKLLADK 459

Query: 461 GTNL 464
           G  L
Sbjct: 460 GEAL 463


>gi|229082555|ref|ZP_04215018.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228700987|gb|EEL53510.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 379

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  K+ +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|77458036|ref|YP_347541.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77382039|gb|ABA73552.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 382

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 17/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A +  Q + + DG  Y +SG K F++S +   +  +A   G  G   +
Sbjct: 127 LAVTEPGGGSDVANL--QTRAVRDGDYYRVSGSKTFITSGVRADYYTVAVRTGAPGFGGI 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             LL + S  G    R   K+G  ++ T EL F +     G L+G  N+    +      
Sbjct: 185 SLLLIEKSTPGFTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQS 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+M+    +++L E++ +A+ R   G  +    V+K  +A++A  +  +   ++R
Sbjct: 245 ERLALALMANMTAQLALEESVKWAKEREAFGKPIGKFQVIKHRLAEMATTLEVSREFTYR 304

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A      +S  +E + A+  A  T       +  +  EA++ +GG GY+ E  + R YR
Sbjct: 305 QAAKMAAGQSVIKEISMAKNFATDT-------SDRITNEAVQILGGLGYVRESLVERLYR 357

Query: 436 ESPANSIL-LGSGNAMVLD 453
           +   N IL +G G   V++
Sbjct: 358 D---NRILSIGGGTREVMN 373


>gi|313496530|gb|ADR57896.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 393

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGAMGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|144900128|emb|CAM76992.1| acyl-CoA dehydrogenase family protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 586

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 60/311 (19%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ + E+  T             + LTE   G+D+AAI ++     D  Y +SG K F+
Sbjct: 150 PKMVTGEWTGT-------------MNLTEPGAGSDLAAIRTKAVPEGDH-YRISGSKIFI 195

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +     M +  I L         A V+G +  F+VP+ L +     G+ N      L++K
Sbjct: 196 TYGDHEMVENIIHLVLARLPDAPAGVKG-ISLFIVPKFLVNADGSLGARNDAVCASLEHK 254

Query: 279 IGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---L 332
           +G   + T  + F       G L+G+ N     +E M  ++      + + G+ ++    
Sbjct: 255 LGIHGSPTAVMAFGEKDGAIGTLVGEANRG---LEYMFTMMNHARQAVGLQGLAIAERAY 311

Query: 333 AEAIHYARRRHVSG-----------GILIDQPVMKRAIADIALDIAAATALSFR------ 375
            +A++YAR R V G           GI ++ P ++R +  +   I A   L +       
Sbjct: 312 QQALYYARER-VQGKPTGWTGSGPTGI-VNHPDVRRMLMTMKCQIEAMRGLIYSAAAYVD 369

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A++ D+A  R+     A +  P+ K W  ++   + +  ++  GG GY+EE   A+H+R
Sbjct: 370 IAHNHDDAAERARAQLLADLYTPLVKGWSTELGNVIASLGVQVHGGMGYVEETGAAQHFR 429

Query: 436 ESPANSILLGS 446
           ++   +I  G+
Sbjct: 430 DARITTIYEGT 440


>gi|186475529|ref|YP_001856999.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191988|gb|ACC69953.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 596

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 172/390 (44%), Gaps = 70/390 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +    + + P++ S  +  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGNWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + ++ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRTRAEPQGDGSYRIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L   DGS    N +    +++K+G +++ T  L+F +     G L+G+ N     +E
Sbjct: 231 PKFLVHADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ +S        A A    + R V G       +I  P ++R 
Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRM 347

Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           ++ +      + AL++  A       +  D+AK R+E  A    + PI K W  +++  V
Sbjct: 348 LSTMRALTEGSRALAYVAAAHSDIAHHHADQAK-RAEHLAIYEYLVPIVKGWSTELSVDV 406

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            +  ++  GG G+IEE   A++YR++    I  G+      D++               T
Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGR------------KT 454

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           L +D G+  K ++  +  ++   K+ KG A
Sbjct: 455 L-RDGGAVAKALLADIAQTVEALKQHKGAA 483


>gi|121606366|ref|YP_983695.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595335|gb|ABM38774.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 598

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 59/353 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTDAQKKLYLPKLVSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+  + ++ +  +DG + L+G+K F+S+   D       ++LA++    +G  G   F+V
Sbjct: 175 DLGMLRTKAEPQADGTFKLTGNKIFISAGEHDMTSNILHLVLARLPDAPQGSKGISLFIV 234

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  + EDGS    NG+    L++K+G   NAT ++   +  G ++G  N          
Sbjct: 235 PKFNVNEDGSIGSRNGIYCGGLEHKMGIHGNATAQIVLEDAVGTMVGAPNKGLA-----A 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353
           + + +++A + V    + L E     A+ YA+ R     +SG    D+P           
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIVHPDVR 349

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              +  +A A+    +A    L         + K R +      ++ PI K +       
Sbjct: 350 KMLLTAKAYAEGGRALAIYCTLLLDKELYHPDEKVRKDSGEIVALLTPIVKAFLTDNGHI 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
                M+  GG GY++E  + +  R++  N I  G+     LD+L     G N
Sbjct: 410 ATNACMQVFGGHGYVKEWGMEQLVRDNRINMIYEGTNTIQSLDLLGRKILGNN 462


>gi|294783831|ref|ZP_06749153.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294479643|gb|EFG27422.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 636

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F+++  +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GGS
Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|212635764|ref|YP_002312289.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557248|gb|ACJ29702.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 596

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 54/353 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  A+      R+ + +  K+ S E+  T             + LTE   GT
Sbjct: 125 MYPGLTHGAYAAIHVHGNDRLKQKYLEKLVSGEWTGT-------------MNLTESHAGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QVEGRVGCFL 257
           D+A + ++        + ++G K F+SS    ++D  I L           V+G +  F 
Sbjct: 172 DLALLRTKAVPAGQDTFAITGEKIFISSGDHDLTDNIIHLVLARLPDAPKGVKG-ISLFA 230

Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+++  EDGS    N LC   L++K+G   N+T  + F    G L+G  +     +  M
Sbjct: 231 VPKVMVNEDGSLGELNSLCAASLEHKMGIHGNSTCVMNFDGAIGELVGAPHQGLRAMFTM 290

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPVM---------- 355
                L   I  +    ++   A+ YA+ R        V    L   P++          
Sbjct: 291 MNQARLGVGIQGLGVSDIAYQNALAYAKDRIQGRALSGVKNANLAADPILVHGDVRRMLL 350

Query: 356 -KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +++  + A  +    AL    A   ++ + +   A  A +  PI K +          +
Sbjct: 351 SQKSFNEGARALMGQQALWLDEAERHNDPQQQKRAAQLAALFTPIVKGFVTDQGFKACVD 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           A +  GG GYI E  + +  R+   + I  G+     LD++    + +KG  L
Sbjct: 411 AQQVFGGHGYIHEWGMEQFVRDIRISMIYEGTNGVQALDLVGRKVMADKGAAL 463


>gi|311695467|gb|ADP98340.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 600

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 37/316 (11%)

Query: 177 KIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           ++F  E   T   P M     +  + LTE   G+ +A I +      +G Y + G K ++
Sbjct: 138 RVFGNEQQKTTFLPNMLSGRFSGTMALTEPHAGSSLADIRTSASPTDEGHYLIKGAKIYI 197

Query: 236 S---SPMSDAFI--MLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279
           S     ++D  +  +LA+++G       +  F+VP+ L D  G+P   NG+    L +K+
Sbjct: 198 SGGEQSITDNIVHMVLAKIKGAPAGVKGISLFIVPKFLVDDEGNPTERNGVSLAGLIHKL 257

Query: 280 GNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G R   +  L F +     G+L+G+    L      + + ++ +   +A++   G   SL
Sbjct: 258 GYRGTTSTALSFGDDAPCHGYLVGEPHQGLKYMFQMMNEARVGVGFGAAVIGYRGYMHSL 317

Query: 333 AEAIHYARRRHVSGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-- 383
             A    + R  S          +ID   ++R +           AL    A   D+   
Sbjct: 318 EYAKDRLQGRKASEKNPESPQVPIIDHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHT 377

Query: 384 ----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               + R E      ++ P+ K W  +  P     A++  GG+GY  E  + + +R++  
Sbjct: 378 HPDEQKRQEAGKLLDLLTPVIKAWPSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRL 437

Query: 440 NSILLGSGNAMVLDVL 455
           N I  G+     +D+L
Sbjct: 438 NPIHEGTNGIQAMDLL 453


>gi|71895109|ref|NP_001026411.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Gallus gallus]
 gi|53132103|emb|CAG31873.1| hypothetical protein RCJMB04_12m17 [Gallus gallus]
          Length = 433

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++ +K  D  Y ++G K W   +  +  F ++A  +   G     C
Sbjct: 177 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWITLAEHAGVFFVMANTDPASGYKGITC 235

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V R  E     GL   + ++K+G R+++T  + F N     + + N+     +  K  
Sbjct: 236 FIVDRDTE-----GLHVGKKEDKLGIRASSTCPVTFENV---KVPETNILGQIGQGYKYA 287

Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+     A+ Y + R   G  + D   M+  IA +A  + AA
Sbjct: 288 IGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGKRIFDFQAMQHQIAQVATQLEAA 347

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G+ +   
Sbjct: 348 RLLTYNAARLAETGKPFIKEASMA-------KYYAAEVATLTTSKCIEWMGGVGFTKNYP 400

Query: 430 IARHYRESPANSILLGSGN 448
           I ++YR+    +I  G+ N
Sbjct: 401 IEKYYRDCKIGTIYEGTSN 419


>gi|239625370|ref|ZP_04668401.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239519600|gb|EEQ59466.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 380

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 140/336 (41%), Gaps = 52/336 (15%)

Query: 143 MAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +A+++AG+ ++   T  ++  V L  TP   + +A        D  N+          G 
Sbjct: 76  LAKVDAGYAITFVTTFVALRNVILAGTPEQAQYFA--------DIINRGSFA------GF 121

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            LTE   G+D A I  +G  + DG  Y L+  K F+++  +SD ++   +     G   +
Sbjct: 122 ALTEPNAGSDPAGI--RGTAVLDGDEYVLNATKTFITNGALSDIYVGFFKTSPEAGHKGI 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
              + D +  G+     +NK+G R + T +L F N               F   L  LN+
Sbjct: 180 SAFIIDRNMPGVSVGAHENKMGLRLSNTTDLIFENVRVPRDRMLGPEGSGFKLALNALNL 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           S   V           A ++V  M+ +L EA+ YA+ R      +I+  +++  +AD+A+
Sbjct: 240 SRAFV-----------ATLAVGIMQRALDEAVKYAKERKQFNTPIINFQMVQALLADMAI 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L        D      +E +       ITK +    A  V + A++  GG GY
Sbjct: 289 KVEASRCLVNNTMRMMDAGSLVQKEGS-------ITKTFVTDCAQEVTSNAVQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             E  + +  R+     I  G+     + + N+L K
Sbjct: 342 SREYPVEKLMRDVKVFQIFEGTNQIQRMTIANVLNK 377


>gi|152984092|ref|YP_001351076.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150959250|gb|ABR81275.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 600

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 134/310 (43%), Gaps = 50/310 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +  +DG Y + G+K F+S    P+S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEAAADGSYRIRGNKIFISGGDHPLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L +     G  N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270

Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G  +     +  M    +I + + + ++  +G   SL     YAR R   
Sbjct: 271 DNGACVGYLVGKPHQGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--P 324

Query: 346 GGILIDQ--------PVMKRA-----------IADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++ A             + A D+    A  F  + + ++ + R
Sbjct: 325 QGRLPDGKDPSAPQVPIIRHADVRRMLLAQKTYVEGAFDLGLYAARLFDDSQTLEDDEQR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +      ++ PI K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 RQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLN 456
                LD+L 
Sbjct: 445 HGIQSLDLLG 454


>gi|160895625|ref|YP_001561207.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361209|gb|ABX32822.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 385

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 47/286 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           TP     W PK+ + E             +     LTE   G+D A++ +    I DG  
Sbjct: 102 TPEQQAAWLPKLATGE-------------IMASFALTEPEAGSDAASLRTTA--IRDGDH 146

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y ++G+K F++ +P +  F ++A+ +      G V  F+V     D    G+ + +   K
Sbjct: 147 YVVNGNKRFITNAPHAGMFTLMARTDPANKGAGGVSAFIV-----DAKSPGISFGKNDVK 201

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           +G +   T ++ F N       L+G L    G    MK+L   D   + ++ + V +A+ 
Sbjct: 202 MGQKGAHTCDVFFDNVRVPAANLIG-LKEGQGFKTAMKVL---DKGRIHIAAVSVGVAQR 257

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A++YA  R   G  + +  +++  +AD   ++ AA  +    A   DE ++ S EA
Sbjct: 258 ILRDALNYALERKQFGQPICEFQLVQAMLADSQAELYAAECMVIDAARRRDEGRNVSTEA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +         K +  +M   V   A++ +GGSGY+ E  I R YR+
Sbjct: 318 S-------CCKMFATEMVGRVADRAVQILGGSGYLAEFGIERFYRD 356


>gi|213023648|ref|ZP_03338095.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 145

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83
            NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN + P+
Sbjct: 9   FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAAR  L 
Sbjct: 69  LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLH 124

Query: 144 AQLEAGHLMSPSVTSAS 160
           AQ+EAG L   ++T A+
Sbjct: 125 AQVEAGTLCPVTMTFAA 141


>gi|330954908|gb|EGH55168.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|259488893|tpe|CBF88712.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_1G14850) [Aspergillus nidulans FGSC A4]
          Length = 439

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 33/300 (11%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           +V + W PK+               T       L+E   G+D  A+ ++ +K +DG Y L
Sbjct: 161 QVQRTWLPKL--------------ATGTVGSFCLSEPVSGSDAFALQTKAEKTADG-YKL 205

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K W  +S  +  FI+ A +    G   +   + +    G    + + K+G ++++T 
Sbjct: 206 NGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIKASSTC 265

Query: 288 ELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            L F +     G LLG+       + G + + +I I      +++ G   + A+ +   R
Sbjct: 266 VLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAAKYVWNDR 324

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R+   G ++ +   M+  IA    +IAAA AL +  A   +  +   ++AA A++     
Sbjct: 325 RQF--GQLVGEFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL----- 377

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 378 --YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|254420905|ref|ZP_05034629.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187082|gb|EDX82058.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 594

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 48/350 (13%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           + A   A   M P +TS++   +  +    +   + PK+ S E+  T             
Sbjct: 115 MTAGASAAFSMYPGLTSSAYAGIHASASDEIKAKYLPKMVSGEWSGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGRV- 253
           + LTE + GTD+  + ++     DG Y ++G K ++S+     SD  I  +LA++EG V 
Sbjct: 162 MNLTEPQCGTDLGMVRTKAVPNGDGSYSITGQKIWISAGEHDFSDNIIHTVLARIEGAVP 221

Query: 254 -----GCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD-- 301
                  F+VP+ L  EDGS    N L    L++K+G   NAT  +++    G+LLG+  
Sbjct: 222 GIKGLSLFVVPKYLVNEDGSLGERNTLECAGLEHKMGIHGNATCVMQYDGAKGWLLGEEG 281

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351
             +N     + + ++   L    +  +  + +   A    + R ++G          +I 
Sbjct: 282 RGMNNMFVVMNEARLGTGLQGLAIGTAAYQAAAEFAKDRLQGRSLTGPKNPEGPADPIIV 341

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCK 406
            P ++R + +    +    A     A   D  KS  E  A     Y  ++ P+ K +   
Sbjct: 342 HPDVRRMLLEARAFVEGGQAFILWTALHADLEKSEDEAVATKAKDYMGLLTPVLKAYLTD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               V + AM+  GGSGY E    +++ R++    I  G+     LD++ 
Sbjct: 402 KGFHVASLAMQVHGGSGYTEHFPASQYLRDARITMIYEGTNGIQALDLVG 451


>gi|110834101|ref|YP_692960.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110647212|emb|CAL16688.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 387

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++T +  K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMTLRADKQGDH-YVLNGNKMWITNGPDAHTYVIYAKTDTNAGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + + S  G    +  +K+G R + T EL F +     + + NV     E +K+L+  
Sbjct: 187 TAFIVERSFAGFSQAQKLDKLGMRGSNTCELVFQDC---RVPEENVLGSVGEGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG    + +A     + Y   R   G  + +  +M+  IAD+ + + A+ + 
Sbjct: 244 LDYERTVLSGATTGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIADMYVTLNASRSY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +C + A  +  EA++ +GG+GYI E    R
Sbjct: 304 LYNVAKACDRGETNRKDAAGVIL-------YCAENATKMALEAIQALGGNGYINEYPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|73539029|ref|YP_299396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72122366|gb|AAZ64552.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 387

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 14/265 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A +T+   +  D  Y ++G K +++S M   +  +A   G  G   V 
Sbjct: 133 LAITEPGAGSDVAHLTTSACREGD-HYVVNGTKLYITSGMRADYFTVAVRTGDPGASGVS 191

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL +G   GL    LK K+G  ++ T +L F N       L+G+       +       
Sbjct: 192 LLLIEGDTPGLSRTELK-KMGWWASDTAQLYFDNCRVPVDNLIGEEGKGFAAITKNFNHE 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A  +    +V   +A+ +A  RH  G  L D  V++  + D+A  I A  A+   L
Sbjct: 251 RLALAAAACGYAQVCFHDALAWAGDRHTFGKRLADHQVVRHQLVDMATRIEATRAMLDDL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+  +   + A A+ MA  T  +C          A++ +GG GY+    + R YRE
Sbjct: 311 AARLDDGAAPVAQIAMAKNMATRTFQFCAD-------RAVQLLGGMGYMRGSRVERLYRE 363

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
                +++G G   ++  L   + G
Sbjct: 364 --VKVMMIGGGAEEIMKDLAARQLG 386


>gi|285016972|ref|YP_003374683.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73]
 gi|283472190|emb|CBA14697.1| putative acyl-coa dehydrogenase protein [Xanthomonas albilineans]
          Length = 387

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 36/281 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLRAEARGD-RYVLNGNKMWITNGPDADVLVVYAKTDPAGGARGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + + +  G    +  +K+G R + T EL F        N  G + G + V       
Sbjct: 187 TAFVVEKTMPGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENVLGEVGGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M  +L   + Y   RH  G  + +  +M+  +AD+ + +
Sbjct: 240 --LMSGLDYERVVLSGGPLGLMAAALDVVLPYVHERHQFGEAIGNFQLMQGKLADMYVGL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A  + +A S D  ++  ++AA A + A     W       +  +A++ +GG+GYI 
Sbjct: 298 NACRAYVYAVARSCDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +    R +R++    I  G+G + +  +L     G  LFEQ
Sbjct: 351 DYPTGRLWRDAKLYEI--GAGTSEIRRIL----IGRELFEQ 385


>gi|312196625|ref|YP_004016686.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227961|gb|ADP80816.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 131/311 (42%), Gaps = 56/311 (18%)

Query: 169 RVHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           R H D     F R  D   +      +    +   + LTE   G+D+AA+ +  ++  D 
Sbjct: 89  RTHLDVILPYFRRYCDAAQRDRWFPGISSGELMTAIALTEPDTGSDLAAVRTAARREGDH 148

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K +++   ++D  I+L +        R G  L+  ++EDG P G    R   K
Sbjct: 149 -YVLNGAKTYITGGSLADLVIVLCRTSTDPANRRDGLTLL--VVEDGMP-GFVKGRKLEK 204

Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           IG ++  TVEL F++               FG+L  +L     P E + I      A+ S
Sbjct: 205 IGLKAQDTVELSFTDVVVPVANRLGEADQAFGYLGANL-----PQERLAI------AVGS 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR-----LANS 379
           V+  R +L   + Y   RH+ G  +      K  +A ++ +I A  A   R     +A S
Sbjct: 254 VAQARAALDLTVEYVMSRHIFGRPVSGFQNTKFELAAMSTEIEAGQAFLDRGIEQLVAGS 313

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              A +       AR+     K +C ++   V+   ++  GG GYI E  IAR Y ++  
Sbjct: 314 LSPADA-------ARV-----KLFCTELQGRVVDRCLQLFGGFGYITESPIARLYADARV 361

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 362 TRIYGGTSEVM 372


>gi|194700346|gb|ACF84257.1| unknown [Zea mays]
 gi|195642912|gb|ACG40924.1| isovaleryl-CoA dehydrogenase [Zea mays]
 gi|223947637|gb|ACN27902.1| unknown [Zea mays]
          Length = 407

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 31/291 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P     + PK+ S E+              IG L ++E   G+D+ ++  + +K+ DG 
Sbjct: 129 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 173

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +   ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 174 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 232

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++   +  M+  L   + Y R
Sbjct: 233 SDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 292

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A   
Sbjct: 293 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 349

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                + A  V  +A++C+GG+GYI E    R  R+  A    +G+G + V
Sbjct: 350 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 394


>gi|237739189|ref|ZP_04569670.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31]
 gi|229423789|gb|EEO38836.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31]
          Length = 636

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F+++  +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GGS
Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|255570831|ref|XP_002526368.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223534327|gb|EEF36039.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 406

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 35/289 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++  +   + DG 
Sbjct: 130 SPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADCV-DGG 174

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P++   ++ A+ + + G   +   ++E G P     Q+L +K+G R 
Sbjct: 175 YILNGNKMWCTNGPVAQTLVIYAKTDVKAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 233

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIH 337
           + T EL F N F   + D NV     + + +++    L+  ++S      M+  L   + 
Sbjct: 234 SDTCELVFENCF---VPDENVLGQEGKGVYVMMSGLDLERLVLSAGPLGIMQACLDVILP 290

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A
Sbjct: 291 YIRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDRGKVDPKDCAGVILCA 350

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   + A  V  +A++C+GG+GY+ E    R  R++    I  G+
Sbjct: 351 A-------ERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 392


>gi|94501687|ref|ZP_01308202.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94426174|gb|EAT11167.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 594

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 42/294 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   GTD+  I ++ +  +DG Y +SG K F++     M++  I L         A
Sbjct: 164 MDLTEPHCGTDLGIIRTKAEPQADGSYAISGTKIFITWGEHDMAENIIHLVLAKLPDAPA 223

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +G +  FLVP+ L  EDGS    N +    +++K+G + +AT  + +    G+L+G++
Sbjct: 224 GPKG-ISLFLVPKYLVNEDGSLGEKNTMGCGSIEHKMGIKGSATCVMNYDGAKGWLVGEV 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR------------HVSGG 347
           N     +  M  ++  +   + + G+ V   S   A+ YA  R              +  
Sbjct: 283 NKG---LAAMFTMMNYERVAVGIQGLGVAENSYQNAVLYANDRLQSRAPTGKQFPEKAAD 339

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITK 401
            +I  P ++R +  +  +   + A S   +   D AK   +E       A   ++ P+ K
Sbjct: 340 PIIVHPDVRRMLMTMRANTEGSRAFSTYASRWLDLAKFSEDEDVRKNAEAMVALLTPVVK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +   +A     E  +  GG G+I E    +H R+     I  G+     LD++
Sbjct: 400 SFLTDLALESAIEGQQVFGGHGFIREWGQEQHVRDIRITQIYEGTNGIQSLDLI 453


>gi|257483065|ref|ZP_05637106.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289624776|ref|ZP_06457730.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650647|ref|ZP_06481990.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298489178|ref|ZP_07007197.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156260|gb|EFH97361.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320326436|gb|EFW82489.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331592|gb|EFW87530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872316|gb|EGH06465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G+ G + +      ++   ++ G    LT K+ +A+
Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509


>gi|124487759|gb|ABN11966.1| putative acyl-coenzyme A dehydrogenase, short chain
           [Maconellicoccus hirsutus]
          Length = 297

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             L+E   G+D  AA T+  QK +D  + L+G K W  +   S+A I+ A  +       
Sbjct: 37  FALSEPGNGSDAGAASTTATQKGND--FVLNGSKCWITNGYESEAGIVFATTDKSKKHKG 94

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   L +    GL   + ++K+G R ++T  L F +    ++   N+   P    KI ++
Sbjct: 95  ISAFLINKPCPGLTLGKKEDKLGIRGSSTCTLNFEDC---IVNGENILGEPGMGFKIAMM 151

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++   + +A+A     + YA  R   G  ++    ++  IAD+AL + +A  
Sbjct: 152 SLDAGRIGIASQALGIAQASLDVAVEYASTRTAFGASILKLQAIQTKIADMALRLESARL 211

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEER 428
           L++R A   D+ +  ++EAA A++ A          + A    + +CI   GG GY+ + 
Sbjct: 212 LTWRAAYLKDKKQPFTKEAAMAKLAA----------SEAATFNSHQCIQILGGMGYVSDM 261

Query: 429 SIARHYRESPANSILLGS 446
              RHYR++    I  G+
Sbjct: 262 PAERHYRDARITEIYEGT 279


>gi|325969830|ref|YP_004246022.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
 gi|323709033|gb|ADY02520.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
          Length = 387

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 45/309 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T R  ++  PKI S E+                  L+E   G+D AAI ++ ++   G +
Sbjct: 104 TDRQREEILPKIASGEW-------------VASYALSEPCCGSDAAAIETRAER-RGGEW 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLK-NK 278
            ++G K W      +D +++ A+    E R   V  FLV R          C +  K   
Sbjct: 150 VINGRKIWITQGAYADIYLLFARTGPKEARHKAVTAFLVKR--------SDCVEVSKLEM 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA---- 333
           +G R     E++F++    ++GD +V     E  +I ++ LD A + +SG+ + L+    
Sbjct: 202 MGMRGAGEAEVKFNDC---VVGDDDVLGKVNEGFRIAMVTLDLARIGISGVALGLSQGVL 258

Query: 334 -EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            EA+ +A+ R   G  LID   ++  +ADI   +     ++++ A  +D     +++ ++
Sbjct: 259 DEALEWAKTRTAFGKPLIDWEWVQFQLADIKAKLEIGRTVTYKAAWLYD-----NKDPSF 313

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             + A I K +  +MA  +  + ++ +GG GY +E    R YR++    I  G+     +
Sbjct: 314 V-LYASIAKLYTAQMAVEIARDGVQILGGFGYSKESFSERAYRDAKVLEIAEGTNEVQRM 372

Query: 453 DVLNLLEKG 461
            +  +L +G
Sbjct: 373 VIYKILTRG 381


>gi|229542902|ref|ZP_04431962.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229327322|gb|EEN92997.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 380

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 25/258 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           PM K       GLTE   G+D     ++   + DG  + ++G K ++++      +++  
Sbjct: 113 PMAKGEALGAFGLTEPNAGSDAGGTRTKA--VLDGDEWVINGEKCWITNAEYARQVIVTA 170

Query: 249 VEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           V G+   G  ++  ++      G+       K+G R + T ++   N       LLGD N
Sbjct: 171 VTGKRENGRNIISAIIVPADAPGVAITSPYEKMGVRGSNTCQIVLENVRVPRENLLGDEN 230

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                    + L  LD   +S++ + V +A+A     + YA+ R   G  +     ++  
Sbjct: 231 KGFS-----QFLYTLDGGRISIAALSVGIAQAAFEKALRYAKERMQFGQAISKFQAIQFK 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A++I  A    ++ A   D+ K  S+EAAYA++ A    +  C        +A++ 
Sbjct: 286 LADMAMEIDLARNAVYKAAWLKDQGKPFSKEAAYAKLFASEMGFRVCN-------QAIQI 338

Query: 419 IGGSGYIEERSIARHYRE 436
            GGSGY+ E  + RH R+
Sbjct: 339 HGGSGYMREYGVERHLRD 356


>gi|330967254|gb|EGH67514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 601

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|229094455|ref|ZP_04225526.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|301056809|ref|YP_003795020.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|228688937|gb|EEL42765.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|300378978|gb|ADK07882.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 379

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  L+++ A    E     +E+A +++ A          A  V  EA++  
Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|327188068|gb|EGE55295.1| putative acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 591

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/442 (22%), Positives = 183/442 (41%), Gaps = 66/442 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LG+ ++     E  R A      L   G   G    D +V     W  L R  I  G + 
Sbjct: 31  LGDDLVDAILSEAGRFATEEVAPLSDIGDRQGARLVDGEVRLPDGWRDLYRNWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175
               ++F          + A  ++    +     ++P++T  ++ A+ T  +  + + + 
Sbjct: 91  LTAPQAFGGQALPDMLNVAALEMWNSGSMA--FALAPTLTMGAIEAVHTHGSAALKETYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+ A+ ++ ++  DG Y + G K F+
Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     +++A ++V    V+
Sbjct: 256 GIHGSPTCTMIYGDGRFGGEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310

Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377
           +AEA     + YAR R           G+  ++D P + R +  +      A A+S+  A
Sbjct: 311 IAEAATQKALAYARERTQGRAPGSTGPGMSPIVDHPDVARMLLTMRALTQGARAISYACA 370

Query: 378 NSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++ D    A  R      A ++ PI K +       V +  ++  GG G+IEE   AR+ 
Sbjct: 371 HAIDMSRRAGDRRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGIGFIEETGAARYL 430

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++    I  G+     +D++ 
Sbjct: 431 RDARIAPIYEGTNGIQAIDLVT 452


>gi|67517089|ref|XP_658428.1| hypothetical protein AN0824.2 [Aspergillus nidulans FGSC A4]
 gi|40746498|gb|EAA65654.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 437

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 33/300 (11%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           +V + W PK+               T       L+E   G+D  A+ ++ +K +DG Y L
Sbjct: 159 QVQRTWLPKL--------------ATGTVGSFCLSEPVSGSDAFALQTKAEKTADG-YKL 203

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K W  +S  +  FI+ A +    G   +   + +    G    + + K+G ++++T 
Sbjct: 204 NGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIKASSTC 263

Query: 288 ELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            L F +     G LLG+       + G + + +I I      +++ G   + A+ +   R
Sbjct: 264 VLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAAKYVWNDR 322

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R+   G ++ +   M+  IA    +IAAA AL +  A   +  +   ++AA A++     
Sbjct: 323 RQF--GQLVGEFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL----- 375

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 376 --YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|327479105|gb|AEA82415.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 393

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 44/275 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
             + + PK+ S EY              IG  GLTE   G+D  ++ ++ +K+ DG Y L
Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164

Query: 229 SGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SG K W  +SP++D F++ A+ + G +  F++ +  E     GL    +  K+G R++ T
Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDAGEIRGFVLEKGWE-----GLSAPTIHGKVGLRASIT 219

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+   N F        D+    GP         L+SA   +S   +  AE     A  Y
Sbjct: 220 GEIVMDNVFCPEENAFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +  E       +  
Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I K   C  A  V   A + +GG+G  +E  +ARH
Sbjct: 327 IMKRNSCGKALDVARMARDMMGGNGISDEFGVARH 361


>gi|228915131|ref|ZP_04078728.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228844560|gb|EEM89614.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 381

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 37/278 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           PM         GLTE   G+D A  T     + +  Y +SG K ++++      I++  V
Sbjct: 113 PMASGKTLGAFGLTEPNAGSD-AGGTQTKAILDEDEYVISGEKCWITNAEYANTIIVTAV 171

Query: 250 EG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            G       R+  F+VP   E     GL      +K+G R++ T E+           +L
Sbjct: 172 NGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENIL 226

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           GD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + +  
Sbjct: 227 GDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  +  
Sbjct: 281 AIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIAN 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 334 QAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369


>gi|62988280|ref|NP_001017933.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Bos taurus]
 gi|75060971|sp|Q5EAD4|ACDSB_BOVIN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|59857635|gb|AAX08652.1| acyl-Coenzyme A dehydrogenase, short/branched chain precursor [Bos
           taurus]
 gi|113911860|gb|AAI22699.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Bos taurus]
 gi|296472531|gb|DAA14646.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Bos taurus]
          Length = 432

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T  A  + ++E   G+D  A+ ++  K  D  Y ++G K W  S+ ++  F+++A 
Sbjct: 164 PKLATEKASSICISETGAGSDSFAMKTRADKKGD-YYIINGSKMWISSAEIAGLFVVMAN 222

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +   G     CFLV     DG   GL   + +NK+G R+++T  + F N     +   N
Sbjct: 223 ADFSAGYKGITCFLV-----DGDTEGLHVGKPENKLGIRASSTCPVTFENV---KVPKTN 274

Query: 304 VSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           +        K  I  L+   + ++   + +A+      I Y + R   G  + D   ++ 
Sbjct: 275 ILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKERKQFGRRVFDFQGLQH 334

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +A  + AA  L++  A   +  +   +EA+ A       KY   ++A  + ++ +E
Sbjct: 335 QVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMA-------KYHASELAGLITSKCIE 387

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY +   + +++R++   +I  G+ N
Sbjct: 388 WMGGVGYTKSYPVEKYFRDAKIGTIYEGTSN 418


>gi|17548908|ref|NP_522248.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17431158|emb|CAD17838.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 385

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252
           I   LTE   G+D AA+ ++     D  Y ++G K F++ +P + AF ++A+      G 
Sbjct: 120 ISFALTEPNAGSDAAALQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGAEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISAFIVP-----ADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YAR R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYARERRQFGQPIADFQLIQAMLADSQT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK   +      ++A   K +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGKPDHEVGMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           + E  + R YR+
Sbjct: 349 VAEYKVERFYRD 360


>gi|296449145|ref|ZP_06890932.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296261964|gb|EFH08772.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
          Length = 381

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A   +  + + D  Y L+G K F+++ P  D  I++A  +   G    
Sbjct: 125 FGLTEPGAGSDAAGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311
              + +   +G      ++K+G R   T +L F N       LLG       ++ G +E 
Sbjct: 184 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I +    A +++   + +L EA+ Y ++R   G  +      +  IAD+   + AA  
Sbjct: 244 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   D     ++E+A A       KY+  ++A  V  +A++  GG G+I++  I 
Sbjct: 300 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 352

Query: 432 RHYRESPANSILLGS 446
           R YR++   SI  G+
Sbjct: 353 RMYRDARIVSIYEGT 367


>gi|162457525|ref|YP_001619892.1| isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161168107|emb|CAN99412.1| Isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 387

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 38/272 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S E+              IG +G+TE   GTD+  + +  ++  D  Y L G K
Sbjct: 120 YLPKVLSGEW--------------IGAMGMTEPTSGTDVLGMKTFARRDGD-RYILKGRK 164

Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             ++ +P +  F++ A +EGRV  F+V R    G P G        K+G R +   EL F
Sbjct: 165 ALITNAPEAQIFLVYATIEGRVTTFVVER----GFP-GFSTDEKTPKMGMRGSTMSELLF 219

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
            +        L    G + +M   + L+   ++++ M + +A+      I YA  R   G
Sbjct: 220 DDCVVPAWNVLGQEGGGIRNMMRNLELER--LTLAAMSLGIADRCLEIMIQYAGERRSFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCC 405
             + +   ++R IA+      AA AL + +A N   E ++R    A     AP+ K    
Sbjct: 278 KPIAEHGQIQRYIAESYAKTEAARALIYAVARNVSPERRNRLGTDAAKLFAAPVGK---- 333

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                V   AM+ +GG GY  E  + R +R++
Sbjct: 334 ----EVADNAMQVLGGWGYCTEYKVERFFRDA 361


>gi|56476574|ref|YP_158163.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312617|emb|CAI07262.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 377

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           +TE   G+D+ +I +   ++ DG Y ++G K W  S+P++D F + A+   E ++  FLV
Sbjct: 125 MTEPNAGSDLESIATTATRV-DGGYVINGQKTWITSAPVADFFTVFARAGDEKKLTIFLV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL- 315
               E   P G+   R  +K+G  +  T E+ F   F      L+   G  E    K L 
Sbjct: 184 ----EKDVP-GITVGREIHKMGVWALPTSEVAFDGCFVPDSHRLSKEEGDGEGHLKKTLA 238

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I + +  M++   R +L  A+ YA  R   G  +     ++  +AD+A  + AAT L  
Sbjct: 239 EIRIITGAMALGVARAALFAAVRYAGERKQFGKPINRFQAIQLKLADMATGLEAATTLVH 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  +   +EAA A++ A  T    C  A  V+A         GY  E  + R+ 
Sbjct: 299 RAAWLCDMKRPHHKEAAMAKLFATETAAGICDDAARVLAS-------YGYAMEYPVQRYL 351

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R+      L+G G + +L ++
Sbjct: 352 RD--VRFTLIGGGTSEILKLV 370


>gi|15595703|ref|NP_249197.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099492|ref|ZP_01363410.1| hypothetical protein PaerPA_01000504 [Pseudomonas aeruginosa PACS2]
 gi|116054232|ref|YP_788676.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254237269|ref|ZP_04930592.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719]
 gi|254243599|ref|ZP_04936921.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192]
 gi|296387005|ref|ZP_06876504.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           aeruginosa PAb1]
 gi|313111863|ref|ZP_07797655.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946370|gb|AAG03895.1|AE004487_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115589453|gb|ABJ15468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169200|gb|EAZ54711.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719]
 gi|126196977|gb|EAZ61040.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192]
 gi|310884157|gb|EFQ42751.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 601

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       I+LA++    +G 
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L +     G  N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V     I YAR R                  +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D   +S+ EE   A       + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLG 453


>gi|323524855|ref|YP_004227008.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381857|gb|ADX53948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 396

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEENGKDTIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AEA  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  IARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364


>gi|254503377|ref|ZP_05115528.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439448|gb|EEE46127.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 428

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y L+G K W  +SP++D F++ A+ E   G  + 
Sbjct: 170 FGLTEPDAGSDPAGMRTRAEKI-DGGYKLTGSKMWISNSPIADVFVVWAKSEAHDGA-IR 227

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+   N     G LL +++   GP       
Sbjct: 228 GFVLEKGM-KGLSAPKVGGKLSLRASITGEIVMDNVEVGEGALLPNVSGLKGP------F 280

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 281 GCLNRARYGISWGAMGAAEDCWTRARQYGLDREQFGRPLAQTQLFQKKLADMQTEIALGL 340

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R+   FD  +   E       M  I K   C  A  +  +A +  GG+G  EE  +
Sbjct: 341 QAALRVGQLFDAGQMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEEYHV 393

Query: 431 ARH 433
            RH
Sbjct: 394 MRH 396


>gi|209517637|ref|ZP_03266475.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209501933|gb|EEA01951.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 396

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 18/240 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +SP++D F++ A++E      + 
Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITNSPIADVFVVWAKLEEDGNDNIR 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             +LE G   GL    +  K+G R++ T E+     F   + + N+  G          L
Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPEENIMPGVSGLRGPFTCL 251

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATALS 373
           +SA   ++   +  AEA  +  R++V      G  L    ++++ +AD+  +I       
Sbjct: 252 NSARYGIAWGALGAAEACWHISRQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  +ARH
Sbjct: 312 LRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARH 364


>gi|225713624|gb|ACO12658.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Lepeophtheirus salmonis]
          Length = 408

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 28/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
            GLTE   G+D  A ++  +   DG  Y L+G K W  ++P +   ++ A    +     
Sbjct: 146 FGLTEPGNGSDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKG 205

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+VP+     S  G+   + ++K+G R ++T  +   +    ++   NV  G     
Sbjct: 206 ITAFIVPK-----SIPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + V+     +A+     A+ YA +R   G  +    +++  IAD+A+ +
Sbjct: 258 KIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRV 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L +R A + D     ++EAA  ++ A  T  W       V  ++++ +GG G++ 
Sbjct: 318 EASRLLLYRAAAAKDAGMPYTKEAAMTKLFASETATW-------VAHQSIQVLGGMGFVT 370

Query: 427 ERSIARHYRESPANSILLGS 446
           +    R+YR++    I  G+
Sbjct: 371 DMPSERNYRDARITEIYEGT 390


>gi|148260554|ref|YP_001234681.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146402235|gb|ABQ30762.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 386

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 22/247 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++T++ ++  +  Y L+G K +++ +P +  F ++A+  G     +  F
Sbjct: 124 LTEPDAGSDAASLTTRAERDGED-YILNGAKRYITNAPRAGGFTLMARTGGPGASGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKIL 315
           +VP         GL   R   K+G R   T ++   N     +   N+  G P +  +  
Sbjct: 183 IVP-----ADTPGLKLGRPDRKMGQRGTKTCDVILENA---RVPAANIIGGVPGQGFRTA 234

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +S +   +A     EAI YAR R   G  + +  +++  +AD   +++A 
Sbjct: 235 MKVLDRGRLHISAVACGMARRLQDEAIAYARERRQFGRPIGEFQLVQAMLADSEAELSAG 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL   +A ++D+ ++     A   + A   K +C +M   V   A++  GG+GY+ E  
Sbjct: 295 WALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTEMVGRVADRAVQVHGGAGYMAEYK 353

Query: 430 IARHYRE 436
           + R YR+
Sbjct: 354 VERFYRD 360


>gi|325274718|ref|ZP_08140761.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324100147|gb|EGB97950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 375

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 28/272 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+   ++  G  LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  
Sbjct: 110 APLASGAMLGGFALTEPQAGSDASSLKTRARLDGDH-YVLNGSKQFITSGQNAGVVIVFA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           V     G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    +   L
Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
                  E  KI L  L+   + ++   V +A A       YA  R   G  L++   + 
Sbjct: 224 GAEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVAREYANERQSFGKALVEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSHAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|312793411|ref|YP_004026334.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180551|gb|ADQ40721.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 381

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 34/285 (11%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           ++ +E       P + K  +     LTE   G+D+++I +  +K  D  Y L+G K W  
Sbjct: 99  LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +D +++ A  +   G    PR     ++E G     C ++ ++K+G R+++T EL 
Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 212

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F +       LLG     TG +  MK     D     V+ M V +A+     A+ YA+ R
Sbjct: 213 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAVRYAKER 267

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401
              G  L     ++  +AD+ ++I AA A+ +      D  AK  S+E++  ++ A    
Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A  V  + ++ +GG+GY+++  + +  R++    I  G+
Sbjct: 325 ----DVAMKVTTDVVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365


>gi|229017657|ref|ZP_04174549.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|228743640|gb|EEL93748.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 615

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 26/281 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +      DG  + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 194 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 253

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 254 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 304

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 305 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 364

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 365 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
             + R YR++  + I  G+     L V  +L K    FEQ+
Sbjct: 425 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---FEQI 462


>gi|148380150|ref|YP_001254691.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932288|ref|YP_001384448.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934592|ref|YP_001387985.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|148289634|emb|CAL83737.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium botulinum
           A str. ATCC 3502]
 gi|152928332|gb|ABS33832.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930506|gb|ABS36005.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
          Length = 377

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|170724225|ref|YP_001751913.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169762228|gb|ACA75544.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 393

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  +ARH
Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361


>gi|330874800|gb|EGH08949.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 601

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|260777485|ref|ZP_05886379.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607151|gb|EEX33425.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 384

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 43/305 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           M+A   T    +++ PK+ + ++                LG   LTE   G+D A++T+ 
Sbjct: 96  MIASFATEEAKEEFCPKLITGDW----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCY 272
            +K  D  Y ++G K F+S       +++    G      +  F++P         G+ Y
Sbjct: 140 AKKQGDE-YIINGGKTFISGAGDTEVLVVMARTGDSSAKGISAFVIP-----ADAEGISY 193

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R + K+G  S  T  + F N      +LLG      G    MK L    ++ A  S+  
Sbjct: 194 GRKEPKMGWNSQPTRAITFDNVVVPEKYLLG--KEGEGFTFAMKGLDGGRINIATCSIGT 251

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L E + Y + R   G  L     ++  +AD+  ++ AA  +    A+  D      
Sbjct: 252 AQQALNEVMQYVKERKQFGKELAQFQGLQFRLADMVTELVAARQMVRLAASKLD--NQDP 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E  AY      + K +   +   +  +A++  GG GYI+E  + RH+R+   + IL G+ 
Sbjct: 310 EATAYC----AMAKRFATDVGFKICDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTN 365

Query: 448 NAMVL 452
             M L
Sbjct: 366 EIMRL 370


>gi|255654422|ref|ZP_05399831.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-23m63]
 gi|296880876|ref|ZP_06904824.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|296428163|gb|EFH14062.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 377

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A   +  + + D  Y L+G K F+++ P  D  I++A  +   G    
Sbjct: 121 FGLTEPGAGSDAAGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311
              + +   +G      ++K+G R   T +L F N       LLG       ++ G +E 
Sbjct: 180 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I +    A +++   + +L EA+ Y ++R   G  +      +  IAD+   + AA  
Sbjct: 240 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   D     ++E+A A       KY+  ++A  V  +A++  GG G+I++  I 
Sbjct: 296 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 348

Query: 432 RHYRESPANSILLGS 446
           R YR++   SI  G+
Sbjct: 349 RMYRDARIVSIYEGT 363


>gi|183220535|ref|YP_001838531.1| putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910645|ref|YP_001962200.1| isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775321|gb|ABZ93622.1| Isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778957|gb|ABZ97255.1| Putative acyl-CoA dehydrogenase, short-chain specific (SCAD;
           Butyryl-CoA dehydrogenase) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 394

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 21/270 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG---RVG 254
           G+G+TE   GTD+  +T+Q  K  D  Y ++G K ++++  +   F++  +++    ++ 
Sbjct: 134 GMGMTEPGAGTDVLGMTTQAVKKGDR-YIINGVKQYITNGSVGQVFVLYTKLDKNAKKMT 192

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V     + S  G    + + K+G RS+ T +L F +        L V  G +  M  
Sbjct: 193 SFVV-----ESSYKGFSVGKKEEKMGMRSSPTTQLVFEDMEVPEENLLGVENGAITHMMR 247

Query: 315 LIYLDSAIMSVSGM----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            + ++   ++   +    R       +  R R   G  L++   ++R IA+   D  AA 
Sbjct: 248 NLEIERVTLAAQSLGIARRCVDIMCDYTVRHREAFGKKLMEFGQIQRLIAESYADYQAAR 307

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL +++A+        S  AA A+++A        +MA  V   A++ +GG GY  E  +
Sbjct: 308 ALVYQVASELGPDVRNSLGAASAKLVA-------TQMAERVSRNAIQVLGGYGYCREYPV 360

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R +R++   SI  G+  AM  ++ + L+K
Sbjct: 361 ERLHRDAILLSIGGGTNEAMQKNIASDLKK 390


>gi|15964628|ref|NP_384981.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307304205|ref|ZP_07583957.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15073806|emb|CAC45447.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306902673|gb|EFN33266.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 593

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 186/448 (41%), Gaps = 76/448 (16%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDG 114
           LGE ++     E  R A+     L   G  G+R         V+    W  L R  I  G
Sbjct: 31  LGEDLVDAILGEAGRFASEEVAPL---GDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +      +F    +   H +  A + +         ++P++T  ++ AL    T  +  
Sbjct: 88  WNGLTAPEAFGG--QNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKA 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K
Sbjct: 146 TFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQK 192

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRL 275
            F++      +D  + L         A  +G +  FLVP+ L  EDGS    N +    L
Sbjct: 193 IFITWGEHDFTDNIVHLVLARLPDAPAGTKG-ISLFLVPKFLVNEDGSLGERNDVFCHSL 251

Query: 276 KNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           ++K+G   + T  + + +          G+L+G+ N     +  M     +++A ++V  
Sbjct: 252 EHKLGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTM-----MNNARLAVGM 306

Query: 328 MRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALS 373
             V++AEA     I YA+ R        SG G+  +I+ P + R +  +      + A++
Sbjct: 307 QGVAIAEAATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIA 366

Query: 374 FRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  A++ D A +   E A      + ++ PI K +       V +  ++  GG G+IEE 
Sbjct: 367 YACAHAVDMAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEET 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
             AR+ R++    I  G+     +D++ 
Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVT 454


>gi|262376431|ref|ZP_06069660.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308570|gb|EEY89704.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 375

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDH-YILNGAKQFITSGHNAGMIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++         G
Sbjct: 170 TDPAAGKKGMSAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRIHESLRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA  R   G  + +Q  + 
Sbjct: 225 AEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATAYAHDRVAFGKPIFEQQAIS 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +S   EA+ A++ A        +MA  V ++A+
Sbjct: 281 FRLASMATEIEAARQLVHFAARKKEAGESCLTEASMAKLFA-------SEMAERVCSKAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+++  I R YR++    I  G+ +
Sbjct: 334 QIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|241666659|ref|YP_002984743.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240862116|gb|ACS59781.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 395

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 30/268 (11%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           + F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W 
Sbjct: 114 ETFGSEAQKLKYLPKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWI 172

Query: 235 LSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            ++P++D F++ A+ E G +  F    +LE G   GL    +  K+G R++ T E+    
Sbjct: 173 SNAPIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDG 227

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F     LL D+    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 228 VFVPEENLLPDVTGLKGP------FTCLNSARFGIAWGALGAAEDCYARARQYTLERKQF 281

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+A +I+       RL    +E     E       +  I K   C
Sbjct: 282 GRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSC 334

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  IARH
Sbjct: 335 GKALEIARAARDMLGGNGISDEFGIARH 362


>gi|257094018|ref|YP_003167659.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046542|gb|ACV35730.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 607

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 41/294 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  +T++ +   DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 165 LTEAQCGTDLGQVTTRAESRPDGSYAITGTKMFISAGEHDLAANIVHIVLARLSGAPAGT 224

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  E GSP   N +    +++K+G R++ T  L F    G L+ + N  
Sbjct: 225 RGLSLFVVPKFLPNEGGSPGQRNAVNCGAIEHKMGIRASPTAVLNFDAAVGQLIFEPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352
              +        L  A+  ++    S   A+ YAR R              V+  ++   
Sbjct: 285 LEAMFTFMNTARLGIALQGIAHAEASFQGALAYARERRSMRALSGKKDPDSVADALIWHA 344

Query: 353 PV-----MKRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA---PITKY 402
            V      ++AIA+   A+  AAA           +E   R+ +A Y  ++    PI K 
Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYAAAQTADIMFNAVLEE--DRATQAEYDNLLGFYTPILKG 402

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  ++        M+  GG GYI E  + +  R++   ++  G+     LD+L 
Sbjct: 403 FLTELGLEAANLGMQVFGGHGYIHEHGMEQMVRDARIATLYEGTTGIQALDLLG 456


>gi|226225961|ref|YP_002760067.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089152|dbj|BAH37597.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 385

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 19/263 (7%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           TS  +G   L+E   G+D   + ++  + ++G + L+G K W  +   ++ F++ A  + 
Sbjct: 122 TSNTVGAYALSEPGSGSDAFGLATRADR-AEGGWTLNGSKAWITNGGEAEVFVVFANTKP 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +   + +    G    + ++K+G R+++T  L F N F   + D NV     + 
Sbjct: 181 EAGYKGITAFIVERDAKGFSVGKKEDKLGIRASSTTSLHFENVF---VSDANVLGEVGQG 237

Query: 312 MKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI I  L+   + +    + +A+     A  Y + R   G  L D   ++  +A  A +
Sbjct: 238 YKIAIETLNEGRIGIGAQMIGVAQGALSAATAYLKERKQFGKALADFQGIQFQVAQAATE 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + +  A   D  +  + E A A++       +  +M   V +  +E  GG GY 
Sbjct: 298 LEAARLMVYNAARLKDAGQDIAREGAMAKL-------YASQMCERVTSLCVELFGGYGYT 350

Query: 426 EERSIARHYRESPANSILLGSGN 448
            E  + + YR++   +I  G+ N
Sbjct: 351 REYPVEKFYRDAKIGAIYEGTSN 373


>gi|182439592|ref|YP_001827311.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468108|dbj|BAG22628.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 383

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 49/292 (16%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
            + W P++ S E              AIG  GLTE   G+D   + ++ ++   G Y ++
Sbjct: 107 KRTWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLATRAER-DGGDYVVN 151

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K F+++   +D  ++ A+     G      FLVP         GL  + +  K+G R 
Sbjct: 152 GTKMFITNGTWADVVLLFARTNDAPGHRGVSAFLVPT-----DTPGLTRRTVHGKLGLRG 206

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA---- 335
            AT EL         G LLG         +   I +  L    MSV+   V +A+A    
Sbjct: 207 QATAELVLQGVRVPAGALLGPEG------KGFSIAMSALAKGRMSVAAGCVGIAQAALDA 260

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YA  R   G  +    +++  ++DIA+D+ AA  L++R+A+  D  +  +  A+ A+
Sbjct: 261 AVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLIDRGQEFATAASKAK 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A      C          A++  GG GYI+E  + +  R++   ++  G+
Sbjct: 321 LYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVMTLYEGT 365


>gi|315652762|ref|ZP_07905736.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
 gi|315484964|gb|EFU75372.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
          Length = 382

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +    +   LTE   G+D A +T+   K  D  Y L+G K F++ +P+SD  ++ A+
Sbjct: 115 PVVRGEKKLSFALTEPGAGSDAAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAK 173

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301
            +   G   V   + D    G+   + ++K+G    AT       V +  SN  G     
Sbjct: 174 TDMTKGTRGVSAFIIDMKQEGVSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKG 233

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
            N++         +  LD+  + V+   + +AE     A  YA+ R   G  +     + 
Sbjct: 234 FNLA---------MATLDTGRLGVASQAIGVAEGCLEEACKYAKERKQFGKNIGAFQAIG 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+A  + AA  L++R A   D  +          + A + K +  ++   + A+A+
Sbjct: 285 FTIADMATKLEAAKQLTYRAAYMMDTKQDSG-------MAASMAKLYATEVCNEIAAKAV 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI++  + R YR+    +I  G+
Sbjct: 338 QIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367


>gi|170722619|ref|YP_001750307.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760622|gb|ACA73938.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 375

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 30/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+   S+     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  
Sbjct: 110 APLASGSMIGAFALTEPQAGSDASSLKTRARLDGD-YYVLNGSKQFITSGQNAGVVIVFA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           V     G+ G   F+VP  L      G    R+++K+G  ++ T ++ F N        L
Sbjct: 169 VTDPEAGKRGISAFIVPTDLP-----GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+      ++   +E  +I I    A  SV   R +   A  YA+ R   G  LI+   +
Sbjct: 224 GEEGQGYKIALANLEGGRIGI----ASQSVGMARAAFEVARDYAKERCSFGKPLIEHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V ++A
Sbjct: 280 AFRLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 333 LQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|15789868|ref|NP_279692.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10580266|gb|AAG19172.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 397

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 29/283 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ +        L+E   G+D+ A+ +  Q+  D  Y +SG K W  +  ++D   + A
Sbjct: 129 APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDA-YVISGEKLWISNGSVADTVTVFA 187

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           + +   G      F+V R  ED   +G      ++K+G++   T EL F +       LL
Sbjct: 188 KTDPDAGHRGISSFIV-RPAED---DGFIVAGTEDKLGDKGCPTAELRFDDMRVPADRLL 243

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+       +   +   +I I    A  SV   R +L +A  YA+ R   G  + D   +
Sbjct: 244 GEEGDGFKHALETLNGGRITI----AARSVGLARAALDDAREYAQDRDQFGQAISDFQTI 299

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   + AA  L  + A+     +S  +EAA A++       +  +++  V  E 
Sbjct: 300 QHKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQAKL-------YASEISREVANEG 352

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY ++    R+YR++  N I  G+   +   + N L
Sbjct: 353 IQIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 395


>gi|326780257|ref|ZP_08239522.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326660590|gb|EGE45436.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 383

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 49/292 (16%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
            + W P++ S E              AIG  GLTE   G+D   + ++ ++   G Y ++
Sbjct: 107 KRTWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLATRAER-DGGDYVVN 151

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K F+++   +D  ++ A+     G      FLVP         GL  + +  K+G R 
Sbjct: 152 GTKMFITNGTWADVVLLFARTNDAPGHRGVSAFLVPT-----DTPGLTRRTVHGKLGLRG 206

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA---- 335
            AT EL         G LLG         +   I +  L    MSV+   V +A+A    
Sbjct: 207 QATAELVLQGVRVPAGALLGPEG------KGFSIAMSALAKGRMSVAAGCVGIAQAALDA 260

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YA  R   G  +    +++  ++DIA+D+ AA  L++R+A+  D  +  +  A+ A+
Sbjct: 261 AVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLIDRGQEFATAASKAK 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A      C          A++  GG GYI+E  + +  R++   ++  G+
Sbjct: 321 LYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVMTLYEGT 365


>gi|163748947|ref|ZP_02156198.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161331323|gb|EDQ02211.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 585

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 34/288 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++   + DG Y ++G K F+++   D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITAGDHDLTENVIHLVLAKLPDSNG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  D     G  N +    +++K+G ++++T  + + +  G+L+G  N   G
Sbjct: 224 ISLFLVPKIKVDDSGALGESNHVTVGSIEHKMGLKASSTCVMNYDDAQGYLIGRAN--RG 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGGI--------LIDQP 353
            V    ++ Y   AI  + G+  S A    A  YA+ R     +GG         +I   
Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHG 340

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMA 408
            ++R + +I +   A  ALS       D     E +++++ + Y  ++ P+ K +     
Sbjct: 341 DVRRMLLNIRVLTEAGRALSVLTGQQLDIAKYGEGEAQAKASRYVGLLTPVAKAFLSDRG 400

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 A +  GG GYI E  I +  R++    I  G+     +D L 
Sbjct: 401 LDAAITAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLG 448


>gi|261364332|ref|ZP_05977215.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996]
 gi|288567591|gb|EFC89151.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996]
          Length = 589

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 47/314 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247
           + L+E + G+D+  I ++     +G Y LSG K F++     M++  + L          
Sbjct: 161 MNLSEPQAGSDLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAP 220

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G V  F+VP+ L +     G  NG+    +++K+G  ++ T  +EF N  G+L+G  
Sbjct: 221 GVQG-VSMFIVPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRA 279

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQP 353
                 +  M     L+  I   +    +   A+ YA+ R V G           +I  P
Sbjct: 280 GKGLAYMFTMMKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHP 338

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKM 407
            ++R +      +AA  AL  R A   D A +      R E       + PI K W    
Sbjct: 339 DVRRMLLIQKATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWPTDN 398

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------- 454
              +   A++  GG+GY+EE  +A++ R+     I  G+      D+             
Sbjct: 399 GVVLTNLAVQIYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKNGALP 458

Query: 455 LNLLEKGTNLFEQL 468
           L LL +G +L ++L
Sbjct: 459 LKLLAEGKDLADKL 472


>gi|218889247|ref|YP_002438111.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218769470|emb|CAW25230.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 601

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       I+LA++    +G 
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L +     G  N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V     I YAR R                  +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D   +S+ EE   A       + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLG 453


>gi|66047905|ref|YP_237746.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258612|gb|AAY39708.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 601

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|289674347|ref|ZP_06495237.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|330979901|gb|EGH78201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 601

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|256026640|ref|ZP_05440474.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           D11]
 gi|289764636|ref|ZP_06524014.1| acyl-COA dehydrogenase [Fusobacterium sp. D11]
 gi|289716191|gb|EFD80203.1| acyl-COA dehydrogenase [Fusobacterium sp. D11]
          Length = 637

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F++ + +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GG+
Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDAVQIFGGA 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|242240504|ref|YP_002988685.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
 gi|242132561|gb|ACS86863.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 397

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 21/268 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
              L+E + GTDIAA+T + Q+   G + L+G K W     ++   I++A+     G   
Sbjct: 133 AFALSELQAGTDIAALTLEAQRCEGG-WLLNGDKAWIALGDIASDIIVIARTGEGPGPLG 191

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   + D    G+  + L + +  RS +   L F N     +   N+   P +   I L 
Sbjct: 192 LSAFIVDAVAGGVSARPL-DAVAPRSWS--HLHFDNV---RVSPENLLGQPGQGFIIALD 245

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   M+V+   +  A      A+ +A +R +  G L+D  + +  +A + + ++AA+ 
Sbjct: 246 ILDRFRMTVASAAIGFARRAADIALRHAAQRKIYRGRLLDLQLTQATLAKMEVSLSAASL 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ R A   D+ +  + E+A A       KY+ C+ A  ++  A++ +G +G +    + 
Sbjct: 306 LTARAAWQHDDDRPFARESAAA-------KYFACEQACKIVDAALQLLGAAGVVAGSQLE 358

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLE 459
           R YR+     I  G+  A+++++ + L+
Sbjct: 359 RLYRQIRPLRIYEGASEALLMNIASALD 386


>gi|182678727|ref|YP_001832873.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182634610|gb|ACB95384.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 594

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 41/292 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249
           LTE   GTD+    ++     DG Y ++G K F+S+   D       ++LA+       +
Sbjct: 164 LTEPHCGTDLGLSRTKAVPAEDGTYRITGTKIFISAGEHDLTENILHLVLARLPDAPKGI 223

Query: 250 EGRVGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  FLVP+    +D   G+ NG+    +++K+G +++AT  + F    G+L+G+ + 
Sbjct: 224 KG-ISLFLVPKFFVHDDNTLGARNGVSCGSIEHKMGIKASATCVINFDEATGWLVGEPHK 282

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353
               +  M     L   +  +    VS   A+ YAR R     ++G    D+P       
Sbjct: 283 GMRAMFTMMNTERLAVGLQGLGIAEVSYQGAVAYARERLQGRSLTGAKYPDKPADPIIVH 342

Query: 354 -------VMKRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
                  + +RA A+   A  I AA  L  R   +  +A  R E   +  ++ P+ K   
Sbjct: 343 PDIRRMLLTQRAYAEGCRAFGIWAAKHLDLR---NHPDATVRQEAEEFVALVTPVVKALF 399

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +        M+  GG GYI E  + ++ R+     I  G+     LD + 
Sbjct: 400 TDLGSEAANLGMQVFGGHGYIREHGMEQYARDVRIAQIYEGTNGVQALDFVG 451


>gi|152986723|ref|YP_001345944.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961881|gb|ABR83906.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 393

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
             + + PK+ S EY              IG  GLTE   G+D  ++ ++ +K+ DG Y L
Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164

Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SG K W  +SP++D F++ A+  EG++  F++ +  E     GL    +  K+G R++ T
Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+   N F        ++    GP         L+SA   +S   +  AE     A  Y
Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +  E       +  
Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I K   C  A  +   A + +GG+G  +E  IARH
Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361


>gi|21356377|ref|NP_650840.1| Arc42 [Drosophila melanogaster]
 gi|7300557|gb|AAF55709.1| Arc42 [Drosophila melanogaster]
 gi|21430902|gb|AAM51129.1| SD24551p [Drosophila melanogaster]
          Length = 405

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+     +  G    + ++K+G R ++T +L F +    ++   N+   P    K
Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D+ +  ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|330824273|ref|YP_004387576.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|329309645|gb|AEB84060.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 381

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 35/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   GTD+ AI ++ ++   G Y + G K F+++  + +  I++A+  G     L 
Sbjct: 126 IAMTEPGCGTDLKAIGTRARRDGGG-YVIDGAKTFITNGFTCNLLIVVARTGGPGSRGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303
             +LE     G    RL  KIG  ++ T EL F                  FG L+G L 
Sbjct: 185 LIVLETEDLPGFRVGRLLEKIGLHASDTAELFFDGVRVPADQLLGGEEGQGFGQLMGQL- 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E M I      A+ + + + ++L   + YAR R V G  L+D    +  +A++A
Sbjct: 244 ----PYERMLI------AVPAAATIELALQLTLDYARERKVFGAPLLDMQNTRFKLAEVA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                             + K  +E AAY      + K+WC +    V+ E ++  GG G
Sbjct: 294 TIAHVVRTFVNDCTQRLVDGKLDAE-AAY------MAKWWCTEQQCRVVDECLQLFGGYG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  IAR Y  S    I  G+   M
Sbjct: 347 YMTEYPIARLYAASRVQKIYGGANEVM 373


>gi|298369590|ref|ZP_06980907.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282147|gb|EFI23635.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 595

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 49/346 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL    +    + + PK+ S E+  T             + L+E + G+
Sbjct: 124 LMPMLTLGAVDALFKHGSEEQKQTYLPKMCSGEWAGT-------------MNLSEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257
           D+  I ++     +G Y LSG K F++     M++  + L           V+G V  F+
Sbjct: 171 DLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAPGVQG-VSMFI 229

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L +     G  NG+    +++K+G  ++ T  +EF N  G+L+G        +  M
Sbjct: 230 VPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTM 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIA 363
                L+  I   +    +   A+ YA+ R V G           +I  P ++R +    
Sbjct: 290 MKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHPDVRRMLLIQK 348

Query: 364 LDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             +AA  AL  R A   D A +      R E       + PI K W       +   A++
Sbjct: 349 ATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWLTDNGVVLTNLAVQ 408

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+GY+EE  +A++ R+     I  G+      D+      G N
Sbjct: 409 IYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKN 454


>gi|241203347|ref|YP_002974443.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857237|gb|ACS54904.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 592

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 184/443 (41%), Gaps = 67/443 (15%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L   G   G    D +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILAEAGRFATEEVAPLADIGDRQGARLIDGEVRLPDGWRDLYRHWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175
                +F    +   H +  A L +         ++P++T  ++ A+ T  +  +   + 
Sbjct: 91  LTAPEAFGG--QALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKDTYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+  + ++ ++  DG Y L G K F+
Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     +++A ++V    V+
Sbjct: 256 GIHGSPTCTMIYGDGKFGSEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310

Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377
           +AEA     + YAR R         S G+  +++ P + R +  +      A A+S+  A
Sbjct: 311 IAEAATQKALAYARERTQGRAPGSGSAGMSPIVEHPDVARMLLTMKALTQGARAISYVCA 370

Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++ D +    + + +    A ++ PI K +       V +  ++  GG G+IEE   AR+
Sbjct: 371 HAIDMSHRAGDSSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARY 430

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++    I  G+     +D++ 
Sbjct: 431 LRDARIAPIYEGTNGIQAIDLVT 453


>gi|289741097|gb|ADD19296.1| mitochondrial short-chain specific acyl-CoA dehydrogenase precursor
           [Glossina morsitans morsitans]
          Length = 407

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A ++      D  Y L+G K W  ++    A I+ A  +  +    +
Sbjct: 147 FALSEPGNGSDAGAASTTASDKGDH-YLLNGTKAWITNAFEGGAAIVFATTDKSLKHKGI 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              +     NG    + ++K+G R+++T +L F +    ++   N+   P    KI +  
Sbjct: 206 SAFIVTKGINGFSLGKKEDKLGIRASSTCQLIFEDC---IIPKENMLGQPGYGFKIAMKT 262

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   + +A+A     + YA++R   G  +     ++  IAD+AL I +A  L
Sbjct: 263 LDAGRIGIASQALGIAQASLELAVDYAQKRTAFGKPIAKLQAIQGKIADMALKIESARLL 322

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D  +S ++EAA A++ A     +C         + ++ +GG GY+ + +  R
Sbjct: 323 TWRSAWLKDNNQSYTKEAAMAKLSASEAATFCSH-------QCIQILGGMGYVSDMAAER 375

Query: 433 HYRESPANSILLGS 446
           +YR++    I  G+
Sbjct: 376 YYRDARITEIYEGT 389


>gi|114762746|ref|ZP_01442180.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114544656|gb|EAU47662.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 384

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 47/292 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +  TP   + W P + S +             V     LTE   G+D   I +  ++ 
Sbjct: 95  IVMDGTPEQKEQWLPGVASGD-------------VVASFALTEPDNGSDAGGIRTSAKR- 140

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQR 274
             G + ++G K ++++ + +  F + A+ +        V  F+VP         G+   +
Sbjct: 141 DGGDFVINGTKRYITNAVRAGVFTVFARTDADKPGADGVSAFIVP-----ADTPGITVAK 195

Query: 275 LKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              K+G +   T ++ F N        + G  N+  G    MK+L   D   + V  M V
Sbjct: 196 PDRKLGQKGTKTSDVIFENVRVPESAIIGGPKNLHKGFRTAMKVL---DRGRIHVGAMAV 252

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAK 384
             ++     A  YA  R   G  + +  +++  IAD   ++ AA AL    A++FD E K
Sbjct: 253 GQSQRMLDIATDYALERKQFGKPIGEHQLVQGLIADCQAELHAARALVRASADTFDREGK 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                   A I A  TKY+C + A  +   A++  GG+GY+ E  I R YR+
Sbjct: 313 --------AIIEASCTKYFCTEAAGRIADRALQIHGGAGYMAEYDIERLYRD 356


>gi|308474967|ref|XP_003099703.1| hypothetical protein CRE_23552 [Caenorhabditis remanei]
 gi|308266358|gb|EFP10311.1| hypothetical protein CRE_23552 [Caenorhabditis remanei]
          Length = 437

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 26/289 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T       L+E   G+D  A+ +  +K  D  Y ++G K W  +S  S+AF++ A 
Sbjct: 149 PRSVTEAVGSFALSEVSSGSDAFALKTTAKKDGDD-YIINGSKMWITNSEHSEAFLLFAN 207

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +   G   +   + D    G    + ++K+G R+++T  + F N       +LG+    
Sbjct: 208 ADPSQGYKGITAFMVDKDSKGFSIGKPEDKLGIRASSTCPIHFDNVRVPKSAILGEYG-- 265

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
               +  K  I  L++  + +    + LA+      I Y ++R   G  LID   M+  I
Sbjct: 266 ----KGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGERLIDFQGMQHQI 321

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPA 410
           A I  +I AA  L +  A   +       EAA A++ A           ++    ++A  
Sbjct: 322 AQIRTEIEAARLLVYNAARMKENGLPFVREAAMAKLFASQVTTETESLRSQSTYFQVATN 381

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             ++ +E +GG G+ +E  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 382 TTSKCVEWLGGVGFTKEFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 430


>gi|253559432|gb|ACT32396.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens]
          Length = 592

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ + +     G+ N      +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   A+ YAR R  S               +I  P
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK   +     R      ++ P+ K +   +
Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPTTRKRAEDLVALLTPVAKAFLTDL 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+   F 
Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465

Query: 467 QLFS 470
           +LF+
Sbjct: 466 KLFA 469


>gi|237802421|ref|ZP_04590882.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025278|gb|EGI05334.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 601

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/402 (20%), Positives = 163/402 (40%), Gaps = 59/402 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP   + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFISAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              S   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKSADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L  F ++  
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              Q  G+ G + +      ++   ++ G    LT K+ +A+
Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509


>gi|114566040|ref|YP_753194.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336975|gb|ABI67823.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 379

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 30/263 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254
             LTE   GTD+++ T+   K  D  Y L+G K F+++  ++D F++ A  +   G    
Sbjct: 123 FALTEPGAGTDVSSATTTAVKKGDK-YILNGTKTFITNAILADVFVVFAYTDRSAGAKGM 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVST 306
            CFLVP+       +GL   +  +K+G R + T E+ F +       +LG       ++ 
Sbjct: 182 SCFLVPQ-----GSSGLNVGQHFDKMGVRGSQTSEVVFKDCVVAADCMLGKEGDGFKIAM 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  +I I    A MS    +  L E+I Y++ R      +  Q  ++  IA++A DI
Sbjct: 237 SALDVGRIGI----AAMSTGITQGCLDESIKYSKERVQFKKPIASQQAIQWFIANMATDI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A   D+ K  S  A+ A++       +C + A     +A++  GG G+++
Sbjct: 293 DAARFLYMNAAFIKDQGKPFSVAASKAKL-------FCSECAARHTTKAVQIQGGYGFMK 345

Query: 427 ERSIARHYRESPANSILLGSGNA 449
              + R YR+     I  G+  A
Sbjct: 346 GAKVERFYRDVKLTEIGEGTSEA 368


>gi|269955842|ref|YP_003325631.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304523|gb|ACZ30073.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 388

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 34/277 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P   T+  +G L +TE   G+D+ A+ +  +K+ DG Y ++G K F+SS   +D  +   
Sbjct: 118 PRMATAEVLGALAMTEPGAGSDLRAVKTTAKKV-DGGYVVNGAKTFISSGKTADVVVTFV 176

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----------- 295
           +  EG         L+EDG   G  + +  +K+G   + T EL F++ F           
Sbjct: 177 KTGEGNRPDAFSLILVEDGMA-GFEHSKTLHKMGFPGHDTAELSFTDVFVPDENLIGGVE 235

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             GFL   +N+   P+E + I        ++ +    +L   + Y   R   G  ++D  
Sbjct: 236 GRGFLQLMMNL---PLERLSI------GAVAAAVAEAALGWTLDYTTSREAFGQPIVDFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  +A++A  + A  A   R    + + +  ++EAA         K+WC +    V+ 
Sbjct: 287 NTRFRLAEMATTVDAMWAFLDRAMTLYRQGELTADEAAK-------VKFWCTEREWEVLD 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + ++  GG GYI E  IAR + ++  + I  G+   M
Sbjct: 340 QGVQLHGGYGYILEYPIARAFVDARVHRIYGGTNEVM 376


>gi|195569586|ref|XP_002102790.1| GD19319 [Drosophila simulans]
 gi|194198717|gb|EDX12293.1| GD19319 [Drosophila simulans]
          Length = 405

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+     +  G    + ++K+G R ++T +L F +    ++   N+   P    K
Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D+ +  ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|19704756|ref|NP_604318.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328472|ref|ZP_06870992.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19715082|gb|AAL95617.1| ACYL-COA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154378|gb|EFG95176.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 636

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F+++  +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GGS
Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDAVQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|328949605|ref|YP_004366940.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328449929|gb|AEB10830.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 393

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 34/277 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252
           GLTE   G+D A + ++ ++ +DG + L+G K F++   ++  +++ A+     EG+   
Sbjct: 132 GLTEPGSGSDAAGMRTRAEETADG-WVLNGTKQFITQGSVAGVYVINARTDPAPEGKKHL 190

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F+ P     G+P GL   R + K+G  S+ T +L F +    L  D  V       
Sbjct: 191 GISAFVFP----AGTP-GLKIGRKEEKLGLTSSDTAQLVFEDLK--LPKDALVGERGKGF 243

Query: 312 MKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +L  LD      A +SV   R +L  A  YA  R   G  + +   +   +A++A  +
Sbjct: 244 YDVLRVLDGGRIGIAALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEMATAL 303

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  + A   D  K  + EAA A++ A       C        EA++ +GG GYI+
Sbjct: 304 EAARLLYLKAAELKDAGKPFTMEAAQAKLFASEVAVKACD-------EAIQILGGYGYIK 356

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           E  + R++R+  A  + +G G + +L ++   NLL +
Sbjct: 357 EYPVERYWRD--ARLMRIGEGTSEILKIVISRNLLAR 391


>gi|257056459|ref|YP_003134291.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586331|gb|ACU97464.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 373

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 31/292 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++W PK+ S EY              +G + +TE   G+D+ +IT++  +  D  Y ++G
Sbjct: 103 REWLPKLASGEY--------------VGAIAMTEPGTGSDLQSITTRAVRDGDH-YVING 147

Query: 231 HKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++  ++D  ++  + +   G   +  ++ + S  G    R+ +K+G R   T EL
Sbjct: 148 AKTFITNGALADLVVVAVKTDPDAGAKGISLIVVETSTPGFRRGRVLDKVGLRGQDTAEL 207

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F +       LLGD     G ++ M+ L    L  AI +V+GM  ++ + I Y + R  
Sbjct: 208 FFDDVRVPVENLLGD-EEGQGFIQLMQQLPQERLIIAITAVAGMESAIEQTIAYTKERSA 266

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G     +P++K    +    +A A   +       DE   R          A + K W 
Sbjct: 267 FG-----RPLIK--FQNTRYKLAEAATEAAVARAFLDECIERHLRGELDVQSAAMVKLWS 319

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +    V+ E ++  GG GY+ E  IAR + +   + I  G+ N ++ D+++
Sbjct: 320 TERVNKVVDECVQLFGGYGYMTEYPIARAWADVRVSRIFGGT-NEIMKDIIS 370


>gi|50086253|ref|YP_047763.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49532229|emb|CAG69941.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 607

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 129/293 (44%), Gaps = 39/293 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++ +  +DG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPQCGTDLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +       G  N +    +++K+G +++AT  L F    G+L+G++N  
Sbjct: 225 RGISLFIVPKFIPTQDGGVGERNTVACGSIEHKMGIKASATAVLNFDGATGYLIGEINKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        + +A+  ++   +S   A+ YA+ R              V+  I+   
Sbjct: 285 LHAMFTFMNTARIGTAVQGIAHAELSYQGALPYAKERMSMRALSGKKDPDKVADAIIHHA 344

Query: 353 PVMKRAIADIALD------IAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYW 403
            V +  +   A+       I  A  L+ ++A++    D+AK    +        PI K +
Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAQLADKMADALIIGDQAKFEEYDDKLG-FYTPILKGF 403

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++     +  M+  GG GYI+E  + +  R++   ++  G+     LD++ 
Sbjct: 404 LTELGLEAASHGMQVFGGHGYIKEWGMEQILRDARIATLYEGTTGVQALDLIG 456


>gi|94314827|ref|YP_588036.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93358679|gb|ABF12767.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 385

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 37/283 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PKI S E             + I   LTE   G+D A++ ++     D  Y
Sbjct: 102 TEEQKQTYLPKIASGE-------------LIISFALTEPNAGSDAASLQTRADLDGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            ++G K F++ +P + AF ++A+  G+    +  F+VP         G+   +   K+G 
Sbjct: 148 VINGTKRFITNAPRAGAFTLMARTGGQGASGISSFIVP-----ADTPGISLGKPDKKMGQ 202

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----- 333
           R   T ++   N       ++G +    G    MK+L   D   + +S +   +A     
Sbjct: 203 RGTKTCDVVLENVRVPAANIIGGVP-GVGFKTAMKVL---DRGRLHISALACGMAHRLIT 258

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A+ YA+ R   G  + D  +++  +AD   ++ A  ++    A  +D AK   +     
Sbjct: 259 DAVAYAKERKQFGKPIGDFQLIQGMLADSQAELYAGLSMVRDCAQRYD-AKPAGKSDPEV 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++A  TK +C +M   V   A++  GG+GYI E    R YR+
Sbjct: 318 SMLASCTKMFCTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360


>gi|15595644|ref|NP_249138.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099431|ref|ZP_01363349.1| hypothetical protein PaerPA_01000443 [Pseudomonas aeruginosa PACS2]
 gi|116054176|ref|YP_788620.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889187|ref|YP_002438051.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254237322|ref|ZP_04930645.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
 gi|254243543|ref|ZP_04936865.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
 gi|296386944|ref|ZP_06876443.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313111928|ref|ZP_07797717.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946306|gb|AAG03836.1|AE004482_3 glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115589397|gb|ABJ15412.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169253|gb|EAZ54764.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
 gi|126196921|gb|EAZ60984.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
 gi|218769410|emb|CAW25170.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310884219|gb|EFQ42813.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 393

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
             + + PK+ S EY              IG  GLTE   G+D  ++ ++ +K+ DG Y L
Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164

Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SG K W  +SP++D F++ A+  EG++  F++ +  E     GL    +  K+G R++ T
Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+   N F        ++    GP         L+SA   +S   +  AE     A  Y
Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +  E       +  
Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I K   C  A  +   A + +GG+G  +E  IARH
Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361


>gi|255524923|ref|ZP_05391871.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|255511401|gb|EET87693.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
          Length = 634

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F+++   +D +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGDYYILNGEKIFITNGGEADTYIIFAI 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  + +  +K+G RS+AT EL F+N     +   N+    
Sbjct: 172 TTPNIGTHGISAFIVEKGWEGFSFGQHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICRQQAIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + +A  L +  A   +  +  + EAA A       K +   +   ++ +A++  GGS
Sbjct: 289 ATKLRSARLLIYSAAELKENHEHYNMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|255065462|ref|ZP_05317317.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256]
 gi|255050287|gb|EET45751.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256]
          Length = 589

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 34/296 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247
           + L+E + G+D+  I ++     +G Y LSG K F++     M++  + L          
Sbjct: 161 MNLSEPQAGSDLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAP 220

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G V  F+VP+ L +     G  NG+    +++K+G  ++ T  +EF N  G+L+G  
Sbjct: 221 GVQG-VSMFIVPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRA 279

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQP 353
                 +  M     L+  I   +    +   A+ YA+ R V G           +I  P
Sbjct: 280 GKGLAYMFTMMKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHP 338

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKM 407
            ++R +      +AA  AL  R A   D A +      R E       + PI K W    
Sbjct: 339 DVRRMLLIQKATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWPTDN 398

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
              +   A++  GG+GY+EE  +A++ R+     I  G+      D+      G N
Sbjct: 399 GVVLTNLAIQIYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKN 454


>gi|218296043|ref|ZP_03496812.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243420|gb|EED09949.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 372

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 35/270 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        LTE + G+D  ++ ++ +++  G + L+G K W  S+  +  ++++A+
Sbjct: 111 PLAKGEWIGAFCLTEPQAGSDAKSLRAEARRVPGG-FVLNGVKSWITSAGQAHLYVVMAR 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            E  +  FLV    E G+P GL +   + K+G  +  T E+     F     LLG     
Sbjct: 170 TEKGISAFLV----EKGTP-GLSFGPPEEKMGLHAAHTAEVRLEEVFVPEENLLG----- 219

Query: 306 TGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356
               E+ + L Y    LDS  + V+   V +A   +     YA +R   G  L +   + 
Sbjct: 220 ----EEGRGLAYALAGLDSGRVGVAAQAVGIARGAYEIAKAYADQREQFGKKLREHQAIA 275

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + AA AL+ R A   D  +  + EA+ A++ A        ++A  V  EA+
Sbjct: 276 FKIADMHVSLEAARALTLRAAEKKDRGERFTLEASAAKLFA-------SRVAVEVTREAV 328

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  +  + R+YR++    I  G+
Sbjct: 329 QVLGGYGYHRDYRVERYYRDAKVTEIYEGT 358


>gi|114565833|ref|YP_752987.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336768|gb|ABI67616.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 379

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 35/285 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K        +TE   GTD+ A T+      D  Y L+G K F S+ P++D F++ A 
Sbjct: 113 PLAKGQHIGAFAVTEPGAGTDVGAATTTATLDGDS-YVLNGIKTFTSNGPVADTFVVFAF 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  +G   +   +      GL   +   K+G R++ T E+        +L D  V   P
Sbjct: 172 TDKSLGGKGMSAFIISKDNPGLKVGQHFYKMGIRASQTSEI--------ILKDCRV---P 220

Query: 309 VEDM------KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            ED+       + I + S        A  +V   + +L E+I Y+++R   G  +     
Sbjct: 221 REDLLGKEGQGLQIAMSSFDHGRIGIAAQAVGITQAALDESISYSKQRVQFGKPISKNQA 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD+A DIAAA  L    A   D+ +  S+EAA A++ A        +M+    ++
Sbjct: 281 IQWMIADMATDIAAARFLYSYAAFLKDQKQPFSKEAAMAKVFA-------AEMSTRHTSK 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458
           A++  GG GYI+ + + R  R++    I  G+  A  + +  NLL
Sbjct: 334 AVQIHGGYGYIKGQKVERLMRDAKITEIYEGTSEAQRMVIAGNLL 378


>gi|307294245|ref|ZP_07574089.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880396|gb|EFN11613.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 377

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 41/271 (15%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEG 251
           AIG   LTE   G+D +AI +  ++ ++G Y L+G K F++S     ++  F +     G
Sbjct: 117 AIGAFALTEADAGSDASAIRTSARQ-AEGGYVLNGSKQFITSGRIAKLAIVFAVTDVAAG 175

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297
           + G   FLVP         G    +++ K+G  ++ T  + F   F            G+
Sbjct: 176 KRGISAFLVPT-----DTQGFFVDKVEQKLGQGASDTCAIRFDEMFVADDLILGVPGNGY 230

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +   N+  G +      + +  A MS+         A+ YA+ R   G  +I+   +  
Sbjct: 231 AIALSNLEAGRIGIAAQCVGMAQAAMSI---------AVGYAQERRSFGRPIIEHQAVGF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + A+  L    A   D      +EA+ A+++A  T       A +V++ A++
Sbjct: 282 RLADLAAKLEASRQLVLHAAAVKDSGGDCLKEASMAKLVASET-------AESVVSGALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+EE  +A+ YR+     I  G+ +
Sbjct: 335 TLGGYGYLEEFGVAKIYRDVRVCQIYEGTSD 365


>gi|237798206|ref|ZP_04586667.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021058|gb|EGI01115.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 600

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +  +DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGTYRLRGNKIFISGGDHSLSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ +  EDGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFMVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L +A++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKAHQGLSYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARDR--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +      ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KQAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 QGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|169235589|ref|YP_001688789.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167726655|emb|CAP13441.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 380

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 29/283 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ +        L+E   G+D+ A+ +  Q+  D  Y +SG K W  +  ++D   + A
Sbjct: 112 APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDA-YVISGEKLWISNGSVADTVTVFA 170

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           + +   G      F+V R  ED   +G      ++K+G++   T EL F +       LL
Sbjct: 171 KTDPDAGHRGISSFIV-RPAED---DGFIVAGTEDKLGDKGCPTAELRFDDMRVPADRLL 226

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+       +   +   +I I    A  SV   R +L +A  YA+ R   G  + D   +
Sbjct: 227 GEEGDGFKHALETLNGGRITI----AARSVGLARAALDDAREYAQDRDQFGQAISDFQTI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   + AA  L  + A+     +S  +EAA A++       +  +++  V  E 
Sbjct: 283 QHKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQAKL-------YASEISREVANEG 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY ++    R+YR++  N I  G+   +   + N L
Sbjct: 336 IQIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 378


>gi|149182451|ref|ZP_01860926.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1]
 gi|148849844|gb|EDL64019.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1]
          Length = 379

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 28/283 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247
           PM +     G GLTE   G+D   + +   K+    Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAQGEKIGGYGLTEPASGSDAGGMKTTA-KLDGDHYILNGSKIFITNGGIADIYVVFAL 171

Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               Q +     F++    E     G    + + K+G RS+ T E+ F N     +   N
Sbjct: 172 TDPSQRQRGTTAFIIESDFE-----GFSVGKKEKKLGIRSSPTTEIVFDNC---RVPKEN 223

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI ++ LD     ++   V +A+     +I YA+ R   G  +     +  
Sbjct: 224 MLGKEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDASISYAKEREQFGKPIAANQGISF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A  I A+  L+++ A    E     +E+A +++MA  T       A  V  EA++
Sbjct: 284 KIADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLMAGDT-------AMKVTTEAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY ++  + R+ R++    I  G+     L +  ++ K
Sbjct: 337 IFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMVTK 379


>gi|119713661|gb|ABL97712.1| acyl-CoA dehydrogenase [uncultured marine bacterium EB0_39H12]
          Length = 380

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 17/267 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LG+TE  GG+D+A + +   +  DG  + L+G K F++  M  ++ ++    G+ G   +
Sbjct: 125 LGITEPGGGSDVAQMKTIAHR--DGNEWVLNGSKTFITGGMQASYFVIGARTGKEGLGGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV-EDMKI 314
                +    G     ++ K+G  ++ T  L F +       L+G+ N     +  +   
Sbjct: 183 SLFFVEADTPGFTRSAIEKKMGWWTSDTATLYFDDCRIPADNLMGEENKGFYAIMNNFNY 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y+  A M     R    E + Y++ R   G  LI+  V++  +AD++  I A  A   
Sbjct: 243 ERYMMGAQMLGMAKRC-FEECVQYSQDRKTFGKSLIEHQVIRHKLADMSAKIDAMDAYLN 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++A   ++      E   A I     K++C +   ++ +EAM+  GG+GY+    + R Y
Sbjct: 302 QVAQLMNDG-----EMPVAEISK--IKFFCSECLESIASEAMQIFGGAGYLRGNPVERIY 354

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           RE    +I  G G+  ++  L + + G
Sbjct: 355 REVKVMAI--GGGSKEIMKDLTVKQLG 379


>gi|104779425|ref|YP_605923.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95108412|emb|CAK13106.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 393

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|296330517|ref|ZP_06872995.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305674566|ref|YP_003866238.1| short-chain specific acyl-CoA dehydrogenase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296152199|gb|EFG93070.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305412810|gb|ADM37929.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 380

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 33/270 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256
            GLTE   G+D     +Q + I++G  Y ++G K ++++      +++  V G+   G  
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKN 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
           ++  L+      GL      +K+G R + T E+        LL D+     N+   P + 
Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEI--------LLEDVRVPACNLLGDPTKG 232

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++
Sbjct: 233 FKQFLYTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAME 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +  + A   D  +  ++EAAYA++ A        +MA     +A++  GGSGY+
Sbjct: 293 IDLARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYM 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
           +E  + R  R+  A  + +G G + +  ++
Sbjct: 346 KEYGVERMLRD--AKLMEIGEGTSEIQRIV 373


>gi|293332891|ref|NP_001168588.1| hypothetical protein LOC100382372 [Zea mays]
 gi|223949393|gb|ACN28780.1| unknown [Zea mays]
          Length = 407

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 29/286 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              IG L ++E   G+D+ ++  + +K+ DG 
Sbjct: 129 SPEQRLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 173

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +   ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 174 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 232

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++   +  M+  L   + Y R
Sbjct: 233 SDTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 292

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A   
Sbjct: 293 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 349

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + A  V  +A++C+GG+GYI E    R  R++    I  G+
Sbjct: 350 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGT 391


>gi|86157558|ref|YP_464343.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774069|gb|ABC80906.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 385

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP  +      L ++E   G+D+AAI +  ++   G   ++G K ++++     F+ +A 
Sbjct: 119 APAVRGERVAALAVSEPDAGSDVAAIRTTARR-DGGDLVVNGSKMWITNGARADFLTMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
             G  G   +  LL      G    R   K+G  S+ T  L F +       LLG+ +  
Sbjct: 178 RTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQG 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              V        L +A+ +V+GM++ L +AI Y   R   G  +      +  +AD    
Sbjct: 238 FYHVMANFQGERLVAAVQAVAGMQLMLEDAIRYGGERSAFGRPVGKFQAWRHRLADHLTS 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L++R A+     +    E + A++ A       C++A  V  + M+  GG GY+
Sbjct: 298 VEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGYV 350

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IAR +R+  A +I  G+   M
Sbjct: 351 LESDIARAWRDVRAMTIAGGTSEIM 375


>gi|332978365|gb|EGK15088.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 594

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  I ++     DG Y +SG K F++    D       ++LA+     EG 
Sbjct: 166 LTEPHAGTDLGIIKTKANPNDDGSYSISGTKIFITGGEHDLTENIIHLVLAKTPNAPEGS 225

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ +  EDGS    N L    +++K+G + +AT  + F    G+++G+ N  
Sbjct: 226 KGISLFVVPKFIVNEDGSLGERNSLAAGSIEHKMGIKGSATCVMNFDGAKGWMIGEENTG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +  M     +   +  + G  ++   A  YA  R                  +I   
Sbjct: 286 LASMFVMMNYERVTMGLQGLGGTELAYQNAAAYALDRAQGRSDTQIQSPEKPADQIIHHA 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R + +   +  A+   +  +A   DE+K      +    AA   ++ PI K +    
Sbjct: 346 DVRRMLLNARANAEASRCFAMYVAKQLDESKFSVDPENAKAAAARVALLTPIAKAFLTDK 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A     +  +  GG GYI E  + +  R++    I  G+     LD+L
Sbjct: 406 ALEATVDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGANGIQALDLL 453


>gi|296445505|ref|ZP_06887462.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296257071|gb|EFH04141.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 595

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM        + LTE + GTD+  +T++     DG Y ++G K F+S+   D       +
Sbjct: 153 PMAAGRWTGTMNLTEPQCGTDLGLLTTKATPRGDGSYSITGQKIFISAGEHDLSENIIHL 212

Query: 245 MLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++EG       +  F+VP+  +  DGS    N +    +++K+G   NAT  + +  
Sbjct: 213 VLARIEGAPAGVKGISLFIVPKFEVAADGSLGVRNKVVCGAIEHKMGIHGNATCVMNYDG 272

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----------H 343
             G L+G+ N     +  M     L  A+  ++   V+   A+ YA+ R          +
Sbjct: 273 ARGHLVGEANRGLAAMFVMMNEARLGVAVQGLALSEVAYQNALSYAKERLQGRSLSGAKN 332

Query: 344 VSGGI--LIDQPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            SGG   +I  P ++R + +I      A  +A   AL   +A+  ++A++R        +
Sbjct: 333 PSGGADPIIVHPDVRRNLLEIRAFNEAARGLALLAALDSDVAHRAEDARARQAAEDRLGL 392

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K     M      +A +  GG GYI E  + +  R++    I  G+     LD++
Sbjct: 393 LTPVLKGVFTDMGFDNAVKAQQIWGGHGYINENGMEQFVRDARIAMIYEGANGIQALDLV 452

Query: 456 N 456
            
Sbjct: 453 G 453


>gi|32967544|gb|AAP92447.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens]
          Length = 467

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 35/304 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LT    GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++       
Sbjct: 41  LTGPHAGTDLGIIRTKAEPRADGSYAISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 100

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ + +     G  N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 101 KGISLFLVPKFMVNADGSLGERNPVTCGSIEHKMGIQASATCVMNFDQAIGYLVGEPNKG 160

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              +  M     L   I  ++    S   AI YAR R  S               +I  P
Sbjct: 161 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGPQAKDKVADPIIVHP 220

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A S  +A   D AK      +R    +   ++ P+ K +   +
Sbjct: 221 DVRRMLLTMKAANDGGRAFSTYVAMQLDTAKFSEDPDTRKRAESLVALLTPVAKAFLTDL 280

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466
                    +  GG GYI E    +  R+     I  G+     LD++     G+   F 
Sbjct: 281 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 340

Query: 467 QLFS 470
           +LF+
Sbjct: 341 KLFA 344


>gi|331002206|ref|ZP_08325725.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411300|gb|EGG90716.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 382

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +    +   LTE   G+D A +T+   K  D  Y L+G K F++ +P+SD  ++ A+
Sbjct: 115 PVVRGEKKLSFALTEPGAGSDAAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAK 173

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301
            +   G   V   + D    G+   + ++K+G    AT       V +  SN  G     
Sbjct: 174 TDMTKGTRGVSAFIIDMKQEGVSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKG 233

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
            N++         +  LD+  + V+   + +AE     A  YA+ R   G  +     + 
Sbjct: 234 FNLA---------MATLDTGRLGVASQAIGVAEGCLEEACKYAKERKQFGKNIGAFQAIG 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+A  + AA  L++R A   D  +          + A + K +  ++   + A+A+
Sbjct: 285 FTIADMATKLEAAKQLTYRAAYMMDTKQDSG-------MAASMAKLYSTEVCNEIAAKAV 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI++  + R YR+    +I  G+
Sbjct: 338 QIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367


>gi|328545885|ref|YP_004305994.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326415625|gb|ADZ72688.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 403

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y L G K W  +SP++D F++ A+ E   G  + 
Sbjct: 145 FGLTEPDAGSDPAGMRTRAEKI-DGGYRLKGSKMWISNSPIADVFVVWAKSEAHDGA-IR 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   LL +++   GP       
Sbjct: 203 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP------F 255

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 256 GCLNRARYGISWGAMGAAEDCWHRARQYGLDRKQFGRPLAQTQLFQKKLADMQTEIALGL 315

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  V  +A +  GG+G  EE  +
Sbjct: 316 QASLRVGRLFDEGKVAPE-------MISIVKRNNCGKALDVARQARDMHGGNGIQEEYHV 368

Query: 431 ARH 433
            RH
Sbjct: 369 MRH 371


>gi|325273964|ref|ZP_08140125.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
 gi|324100898|gb|EGB98583.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
          Length = 393

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRAKKVEGG-YRLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347
                +  D+    GP         L+SA   +S   +  AEA  H AR+    R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361


>gi|293402114|ref|ZP_06646253.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304506|gb|EFE45756.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 633

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F++ +P++D +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGGKIFITNAPVADTYVVFAS 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TNPDAGTHGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GQGFKIAMATLDGGRIGIAAQALGIAQGAYEHALEYAKERIQFGKPIAQQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +   V+ +A++  GGS
Sbjct: 289 ATKLRCARFLVYSAA----ELKEAHEPYGMESAMA---KQYTSDICLEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365


>gi|117920993|ref|YP_870185.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613325|gb|ABK48779.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 596

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++    +DG + ++G K F+SS     +D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPTADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L   DGS    N L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  S+       A  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
                    +A +  GG GYI E  + +  R+S    I  G+     LD++   LL    
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460

Query: 463 NLFEQLFSTLEQDLGSSGK 481
              +Q  + + + + S GK
Sbjct: 461 AAMQQWSALVTEFIQSQGK 479


>gi|170722519|ref|YP_001750207.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760522|gb|ACA73838.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 594

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 40/312 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-----AFIMLAQ----- 248
           + LTE + G+D+AA+  +G+ + +G  Y + G+K F++    D       ++LA+     
Sbjct: 162 MNLTEPQAGSDLAAL--RGRAVPEGDHYRIVGNKIFITWGEHDMAENIVHLVLARLPDAP 219

Query: 249 --VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298
             V+G +  FL P+ L   DGS    N L    +++K+G   + T  + F +     G+L
Sbjct: 220 PGVKG-ISLFLCPKFLINADGSLGERNDLICTSIEHKLGIHGSPTASMSFGDGGGAIGYL 278

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILID 351
           +G+ +     +  M     L+  +  V     +   A  YA +R V G         +  
Sbjct: 279 VGEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARSYALQR-VQGKPTLAGSSTIAG 337

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              ++R + D+     A  A+++  A   D      +A+ R++      ++ P+ K WC 
Sbjct: 338 HADVRRMLMDMKARTEAMRAVAYFCAGQMDRAAGHPDAQERTQAQDLVGLLTPVVKGWCT 397

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
             A  + ++ ++  GG GY+EE   A+++R++   +I  G+      D++   +  +G  
Sbjct: 398 DNAEGITSDGVQIHGGMGYVEETGAAQYFRDARITTIYEGTTGIQANDLIGRKIAREGGR 457

Query: 464 LFEQLFSTLEQD 475
             + L + ++ D
Sbjct: 458 TIKALLTRIDSD 469


>gi|49088442|gb|AAT51570.1| PA0447 [synthetic construct]
          Length = 394

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
             + + PK+ S EY              IG  GLTE   G+D  ++ ++ +K+ DG Y L
Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164

Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SG K W  +SP++D F++ A+  EG++  F++ +  E     GL    +  K+G R++ T
Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+   N F        ++    GP         L+SA   +S   +  AE     A  Y
Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +  E       +  
Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I K   C  A  +   A + +GG+G  +E  IARH
Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361


>gi|295133017|ref|YP_003583693.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294981032|gb|ADF51497.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 390

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + S  +K  D  Y L+G K F+++ + +D  ++ A+    +    +
Sbjct: 122 LCVTEPFGGSDVAGMRSTAEKKGD-TYILNGSKTFITNGVYADYLVVAAKTSPELKSKGM 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + + +  G+   +L NK+G R++ T E+ F N       ++  S    E+ K   Y 
Sbjct: 181 SIFIVNRNAKGVSASKL-NKLGWRASDTGEIAFDNV------EIPASNMLGEENKGFSYI 233

Query: 318 -----LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                ++  IM V+       +L  AI+Y   R   G  + +   ++  IAD+  ++   
Sbjct: 234 MQHFAMERLIMGVNAHARAEFALDYAINYMNEREAFGKKINEFQALRHKIADMVSEVTVI 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              ++  A    + +   +EA+ +++++        K+A  VI  +++ +GG GY+E+  
Sbjct: 294 KEFNYATAYKLGKGEYPVKEASMSKLLS-------TKIADEVIYGSLQMLGGYGYMEDYP 346

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           +AR +R+S    I  G G + +L
Sbjct: 347 LARMFRDSRLGPI--GGGTSEIL 367


>gi|293608467|ref|ZP_06690770.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829040|gb|EFF87402.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 384

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAMKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|269837232|ref|YP_003319460.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786495|gb|ACZ38638.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 383

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA------QVEGRVG 254
           LTE   G+D AA+T++ ++  D  Y L G K F++    +  +I+ A      +   R+ 
Sbjct: 125 LTEPSAGSDAAALTTRARRDGDH-YVLDGRKIFVTHGDHAGLYIIFAVTDPEARTSRRIS 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F V R        GL   R ++K+G R++   E+  +        LLG+     G    
Sbjct: 184 AFAVDR-----DTPGLAVPRREHKLGLRASEIAEVTLTECRVPATRLLGNEGDGFGIA-- 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  LD   + +    V +A      A  YAR R   G  + D   ++  +AD+A  I
Sbjct: 237 ---MALLDGGRIGIGAQAVGIARGAFDLARRYARERQQFGRPIADFQAIQWKLADMATRI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A   D+ +  +  A+ A++ A  T  +       V  +A++  GG GY+E
Sbjct: 294 DAARLLVWRAATLRDQGQPHTLAASQAKLFASETATF-------VTDQAVQIHGGYGYLE 346

Query: 427 ERSIARHYRESPANSILLGS 446
           E ++ R++R++ A  I  G+
Sbjct: 347 EYAVERYFRDARATVIYEGT 366


>gi|226372490|gb|ACO51870.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rana catesbeiana]
          Length = 409

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 18/266 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +  +    +  
Sbjct: 151 LSEPGNGSDAGAASTVARLDGDH-WVLNGTKSWITNAWDASATVVFATTDKSLKHKGISA 209

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            L +    GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD
Sbjct: 210 FLVEMPSPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRENLLGKPGMGFKIAMQTLD 266

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   + +A+A     + YA +R   G  +     ++  +AD+AL + +A  L++
Sbjct: 267 AGRIGIASQALGIAQAALDCAVDYAEKRIAFGAPITKLQAIQFKLADMALALESARLLTW 326

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  K  ++EAA A+++A        + A  +  +A++ +GG GY+ E    RHY
Sbjct: 327 RAAMLKDNKKPYTKEAAMAKLVA-------SEAATRISHQAIQILGGMGYVTEMPAERHY 379

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+     L + N L K
Sbjct: 380 RDARITEIYEGTSEIQRLVIANQLVK 405


>gi|28900976|ref|NP_800631.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366187|ref|ZP_05778647.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260879829|ref|ZP_05892184.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260894503|ref|ZP_05902999.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|28809422|dbj|BAC62464.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086388|gb|EFO36083.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|308092698|gb|EFO42393.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308114759|gb|EFO52299.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 384

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 32/265 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256
           LTE   G+D A++T+   +  D  + L+G K F+S    +D  +++A    +  G V  F
Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP   E     G+ Y + + K+G     T  + F N      +LLG+        E  K
Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231

Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD      A  SV   + +L EA  Y   R   G  L     ++  +AD+A ++ 
Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +  +A+  +E++AY      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             + RH+R+   + IL G+   M L
Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRL 370


>gi|70733629|ref|YP_257269.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68347928|gb|AAY95534.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 393

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  A+ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKV-DGGYSLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                +  D+    GP         L+SA   +S   +  AE     A  Y   R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  IARH
Sbjct: 336 SLDIARMARDMLGGNGISDEFGIARH 361


>gi|258591366|emb|CBE67665.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 383

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 29/282 (10%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFL 235
           +F  E   +   P   +  A+G   +TE   G+D A +  Q   + +G  + L+G K F+
Sbjct: 100 LFGNEAQRSRYLPQLTSGQALGAWAMTEPGSGSDAAGM--QATAVLEGDHWVLNGTKNFI 157

Query: 236 S-SPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +   ++  ++++A       E  +  F+V    E G+P GL   R ++K+G R++ T ++
Sbjct: 158 TQGSVAGIYVIMALTDRATRERGISAFIV----EQGTP-GLRVGRKEHKMGFRASDTAQV 212

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHV 344
              +       LLGDL+   G ++ + IL    +  A +SV   R  L E + YA+ R  
Sbjct: 213 ILEDVRIPDANLLGDLH--HGFIDALTILDAGRIGMAALSVGIARGCLEEGLKYAKERQA 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +   ++  +AD+A +I AA  L  + A   D  +  ++EA+YA++ A  T    
Sbjct: 271 FGRPIANFEAIQWKLADMATEIDAARLLVLQAAYLKDTDQPFTKEASYAKLFASET---- 326

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A     EA++  GG GYI+E  + R++R++   +I  G+
Sbjct: 327 ---AMKAATEAVQIHGGYGYIKEFPVERYFRDAKFCAIGEGT 365


>gi|197097734|ref|NP_001125424.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pongo abelii]
 gi|55728011|emb|CAH90758.1| hypothetical protein [Pongo abelii]
          Length = 412

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 34/277 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           + E    RHYR++    I  G+     L +   L +G
Sbjct: 373 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRG 409


>gi|297181807|gb|ADI17987.1| acyl-CoA dehydrogenases [uncultured Chloroflexi bacterium
           HF0200_09I09]
          Length = 384

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 34/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC-- 255
           LTE   G+D++A+++      D  Y LSG K ++++   +  +++ A++E   GR G   
Sbjct: 127 LTEPSAGSDVSALSTTAHLDGDD-YVLSGQKTYVTNGDRAGIYLIFAKLEPGRGRDGIAL 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F+V R        GL   R+++K+G R++ T ++   +   T   L+G+ +      E  
Sbjct: 186 FIVER-----KARGLSVVRVEDKMGLRASGTAQIALDDVRVTKNQLVGEAD------EGF 234

Query: 313 KI-LIYLDSAIMSVSGMRVSLA-EAI----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +I L  L+ + + +  M + +A EA+     YA  R + G  + D  V + A AD+ ++I
Sbjct: 235 RIALGTLNGSRVGIGAMCLGVAKEALELGWQYAHERELFGQTVGDFQVTQHAFADMEVEI 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  ++ +R A         + EA+       I K +  + A  ++  +++  GG+GY++
Sbjct: 295 FAIESMVYRTARRLSNGDDVAAEAS-------ICKIFATEAAQRIVDRSLQMHGGAGYLK 347

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +I R YR+     I  G+      +V  ++++
Sbjct: 348 DSAIERLYRDIRVARIYEGANEVQRNNVYRVMKR 381


>gi|227821069|ref|YP_002825039.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234]
 gi|227340068|gb|ACP24286.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234]
          Length = 593

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 50/301 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   G+D+  + ++ ++ +DG Y + G K F++      +D  + L         A
Sbjct: 160 MNLTEPHAGSDLGVLKTRAERRADGTYRIFGQKIFITWGEHDFTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------T 294
             +G +  FLVP+ L +     G+ N L    L++K+G   + T  + + +         
Sbjct: 220 GTKG-ISLFLVPKFLVNADGSLGARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGA 278

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH------ 343
            G+L+G+ N     +  M     +++A ++V    V++AEA     I YAR R       
Sbjct: 279 IGYLVGEENRGLACMFTM-----MNNARLAVGMQGVAIAEAATQKAIAYARERTQGRAPG 333

Query: 344 -VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-----ARI 395
               G+  +I+ P + R +  +      A A+++  A++ D A +   E A+     + +
Sbjct: 334 WTGQGMSPIIEHPDIARTLLTMKALTQGARAIAYACAHAVDMAHASHSEKAHQWQERSSL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +       V +  ++  GG G+IEE   AR+ R++    I  G+     +D++
Sbjct: 394 LTPIAKSFATDAGVDVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLV 453

Query: 456 N 456
            
Sbjct: 454 T 454


>gi|169632453|ref|YP_001706189.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151245|emb|CAO99931.1| acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 600

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|332528089|ref|ZP_08404120.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332112660|gb|EGJ12453.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 591

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 153/331 (46%), Gaps = 54/331 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P ++  ++ AL+T  +  + + + P + S  +  T             + LTE + G+
Sbjct: 124 LCPLLSDGAIEALLTAGSHEMQQAYIPNLISGRWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D++ + ++ +   DG Y + G K F++    D       ++LA+V G       +  F+ 
Sbjct: 171 DLSLVRTRAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARVTGAPEGVKGISLFVC 230

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           P++L DG+ N +    +++K+G +++ T  L+F +     G+L+G+ N     +E M   
Sbjct: 231 PKVLADGTRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRG---LEYM--F 285

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS---------GGILIDQPVMKRAIAD 361
           I +++A   V    ++LAE     A+ YAR R  S            +I  P ++R +  
Sbjct: 286 IMMNAARFGVGVQGIALAERAYQQAVAYARDRVQSRPVDGSTPGAAAIIRHPDVRRMLMT 345

Query: 362 IALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +              A ++  A++  +A +R +  A+   + P+ K    +M+  V +  
Sbjct: 346 MRAHTEGCRAMALVAAAAYDAAHAHPDAAARKQNQAFYEFLVPLVKGLSTEMSLDVASLG 405

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG G+IEE   A+H R++   +I  G+
Sbjct: 406 VQVHGGMGFIEETGAAQHLRDAKILTIYEGT 436


>gi|254429459|ref|ZP_05043166.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195628|gb|EDX90587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 591

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/337 (21%), Positives = 137/337 (40%), Gaps = 49/337 (14%)

Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P++TS + +A+    +  +   + PK++S E+  T             + LTE   GTD+
Sbjct: 128 PALTSGACLAVDAHASEELKGQYLPKLYSGEWSGT-------------MCLTEPHSGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260
             + ++     DG + ++G K F++    D       ++LA++         +  FLVP+
Sbjct: 175 GILRTKAVPNDDGSFNITGTKIFITGGEHDLTGNHIHLVLAKLPDAPAGSKGISLFLVPK 234

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L D     G  NG     +++K+G + +AT  + F +  G+++G+ N     +  M   
Sbjct: 235 FLPDADNNPGEANGATCGSIEHKMGIKGSATCVMNFDDAKGWIIGEPNQGLACMFTMMNY 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK-----R 357
             L   +  +     S   A+ YAR R      +G          I++   V +     R
Sbjct: 295 ERLSIGLQGLGLGEASYQSAVEYARERLQGRSATGAKNPEGPADPIIVHGDVRRMLMNMR 354

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           AI +    +AA   +    +   ++A ++ +      ++ PI K +             +
Sbjct: 355 AINEGGRALAAYVGMQLDTSKFSEDADAKKKAEDRVALLTPIAKAFFTDRGLDTTITGQQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG GYI E  + +  R+   + I  G+     LD+
Sbjct: 415 VFGGHGYIREWGMEQFVRDCRISQIYEGTNGIQALDL 451


>gi|304311605|ref|YP_003811203.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797338|emb|CBL45558.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 387

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 34/278 (12%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQV-------EGRV 253
           TE + G+  A  T++  K +DG + ++G K F+++  +D  A+ ++  V       + ++
Sbjct: 125 TEPQAGSWTAGFTTRATKQTDGQWSITGEKAFITNSGADITAYNLICAVTSAPTDPKSKM 184

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP     G+P G+   +  +K+G RS+ T  +      G  +GD  +  G   D +
Sbjct: 185 SLFLVPA----GTP-GVTIGKSYDKLGWRSSDTHPIYLD---GAKVGD-EMMVGNEGDGR 235

Query: 314 ILIY--LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +++    SA   +S   + L++A     I YA+ R   G  L    ++++ IAD+A+ +
Sbjct: 236 YIVHKTYQSARCFLSACALGLSQACLDHSIAYAKDRQAFGRTLGGLQLVQKMIADMAVKV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  L+ + A   D+  +   E A A       KY CC+M+  V   A++  GG G++ 
Sbjct: 296 ETSRLLARQAAMKADQGTASILELAMA-------KYHCCEMSSEVADLALQVHGGFGFMN 348

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +  I+R+ R++    I  G G++ +  ++   E G ++
Sbjct: 349 DCPISRYLRDTRITRI--GDGSSQIQTMIIAKELGLDV 384


>gi|301061812|ref|ZP_07202545.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444102|gb|EFK08134.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 387

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 34/291 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T  + + + PK+ S EY               G G+TE   G+D+ A+ S  Q   D  +
Sbjct: 104 TDEIKEKYIPKLVSAEY-------------MGGFGITEPNAGSDVMAMKSTAQDKGDH-W 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K W  ++ ++DA I  A  +    G  L   ++E  + NG+    L +K+G+RS+
Sbjct: 150 LINGSKTWISNTSVADALIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSS 208

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
            T E+   +T    +   N+   P +  KI+   L+   +S +   + LA+A       Y
Sbjct: 209 PTGEIYLEDT---KVPKENILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAVTSY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397
            + R   G  +    + +  +  I  ++ AA  + ++ A   D+     + E A A    
Sbjct: 266 CQEREQFGKSIGQFQMNQDMVGQITSELEAARLVVYKAAWQKDQGNLGNTLEVAQA---- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              KY   ++A      AM+ +G  GY  E  +AR+YR++P   ++ GS N
Sbjct: 322 ---KYVAGEIAVKASQVAMKILGAYGYSTEYPVARYYRDAPTYQLVEGSTN 369


>gi|317051571|ref|YP_004112687.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
 gi|316946655|gb|ADU66131.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
          Length = 382

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 41/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR----- 252
            GLTE   G+D     ++   + DG  + L+G K F+++   +D +++ A+ + +     
Sbjct: 124 FGLTEPSAGSDAGG--TRTTAVRDGESWILNGSKNFITNGGEADIYVVFARTDPQARKHH 181

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FLV    E G+P G  + + + K+G RS+ T EL F N    L    N+     E 
Sbjct: 182 GISAFLV----EKGTP-GFSFGKKEVKMGIRSSPTTELVFENCHIPLE---NLLGSESEG 233

Query: 312 MKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIA 360
            K+ +  LD   + ++   + +A+     A+ YAR R        DQP+     +  A+A
Sbjct: 234 FKVAMKTLDGGRIGIAAQALGIAQGALDHAVAYARERR-----QFDQPIGNFQAITFALA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L +R A   D   S S EAA A++ A  T       A  V   A++  G
Sbjct: 289 DMQTRVDAARMLVYRAAVQADSGSSYSREAAMAKLFASET-------AMDVTTRAVQIHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E  + R  R++    I  G+
Sbjct: 342 GYGYTREYPVERMMRDAKITEIYEGT 367


>gi|257055678|ref|YP_003133510.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256585550|gb|ACU96683.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 384

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A++ +   +  D  Y ++G K F++S     F+  A   G+ G   + 
Sbjct: 127 LAITEPDGGSDVASLRTTAVRDGDH-YVVNGAKTFITSGCRADFVTTAVRTGQPGAHGLS 185

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G+P     +RL+ K+G   + T EL F +       L+G  N + G +    + 
Sbjct: 186 LLVIEKGTPGFFVSRRLE-KMGWHCSDTAELSFDDVRVPASHLVGAENSAFGQIATQFVA 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + +  + +L   + + R R   G  LI +  ++  +A++A  I  A     +
Sbjct: 245 ERLTLAVQAYATAQRALERTVEWCRLRETFGRPLISRQTVQHTLAEMARRIDVARTYVRQ 304

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A      +    +  +A+  A     W       V+ +A++  GG GY  E  + RHYR
Sbjct: 305 VAARHAAGEEVIAQTCFAKNTAVEAGSW-------VVDKAVQLHGGLGYSRESEVERHYR 357

Query: 436 E 436
           +
Sbjct: 358 D 358


>gi|187927212|ref|YP_001897699.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780089|ref|ZP_07674841.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724102|gb|ACD25267.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921121|gb|EFP66766.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 384

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 14/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A++T++  +  D  Y +SG K F++S M   +I +A   G  G   + 
Sbjct: 129 LAITEPSGGSDVASLTTRAVRDGDH-YVVSGSKIFITSGMRADYITVAVRTGEAGAGGIS 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL +G   GL    LK K+G   + T +L F N     G LLG  N     V       
Sbjct: 188 VLLVEGDTPGLSRTPLK-KMGWWCSDTAQLHFDNCRVPVGNLLGAENRGFELVMRNFNHE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ +    R  L EA+ +A +R   G  L+   V ++ +  +A  I A  AL   L
Sbjct: 247 RLALAMQAYGLARTCLIEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDL 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                   S   +    +  A  +  +C          A++ +GG G++      R YRE
Sbjct: 307 MRRMQAGDSPVAQLCMLKNFATQSLQFCADT-------AVQLLGGMGFMRGTKSERIYRE 359

Query: 437 SPANSILLGSGNAMVLDVL 455
                 ++G G   VL  L
Sbjct: 360 --VKVYMIGGGAEEVLSDL 376


>gi|113970722|ref|YP_734515.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885406|gb|ABI39458.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 596

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++    +DG + ++G K F+SS     +D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L   DGS    N L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  S+       A  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
                    +A +  GG GYI E  + +  R+S    I  G+     LD++   LL    
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460

Query: 463 NLFEQLFSTLEQDLGSSGK 481
              +Q  + + + + S GK
Sbjct: 461 AAMQQWSALVTEFIQSQGK 479


>gi|229489405|ref|ZP_04383268.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323502|gb|EEN89260.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 380

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 23/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E + G+D AA++ +    +DG Y ++G K W  +   +D + + A+     G   V  
Sbjct: 127 LSEAQAGSDAAALSCKATP-TDGGYRVNGSKAWITNGGRADFYNLFARTSDD-GSRGVSC 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           LL D    GL + + + K+G R+  T    + + F     L+G       P+        
Sbjct: 185 LLVDKDTEGLSFGKPEEKMGLRAVPTASANYDDAFIPEERLIGQRGQGL-PI----AFSA 239

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V +A+     A+ YA+ R   G  +ID   +   +AD+A  + +A   
Sbjct: 240 LDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR-- 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++  GG GY ++  + R
Sbjct: 298 ----ATYLDAARRRDAGVPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPVER 352

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 353 YMREAKITQIFEGT 366


>gi|157961676|ref|YP_001501710.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846676|gb|ABV87175.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 596

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 39/303 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE   GTD+A + ++     DG Y ++G K F+SS   D     A ++LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAIPTGDGNYSITGEKIFISSGDHDLTDNIAHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP++L  +DGS    N L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFVVPKILINDDGSLGESNSLYAASLEHKMGIHGNSTCVMNFDAAIGELVGEAH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350
                +  M     L   +  +    ++   A+ YA+ R               +  IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNAVAYAKDRIQGRALSGVKQPEQAADSILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404
              V +  ++  A +     AL  + A   D+A+           +  A +  PI K + 
Sbjct: 342 HGDVRRMLLSQKAFN-QGTRALMGQQALWLDQAQRDCSPEQAKAASKLAALFTPIVKGFV 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
                    +A +  GG GYI E  + +  R+S    I  G+     LD++    L +KG
Sbjct: 401 TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKG 460

Query: 462 TNL 464
             L
Sbjct: 461 ATL 463


>gi|319953889|ref|YP_004165156.1| isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319422549|gb|ADV49658.1| Isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 389

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L ++E  GG+D+A + +  +K  D  Y ++G K F+++ +  D  I+ A+    +G   +
Sbjct: 125 LCISEPFGGSDVAGMLTTAEKKGD-TYVINGSKTFITNGVYCDYMIVAAKTNSELGNKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L D    G+   +L NK+G R++ T E+ F N       L+G+ N     + +   L
Sbjct: 184 SIFLIDKKTPGVSATKL-NKLGWRASDTGEIAFDNVTIPASNLMGEENKGFSYIMEHFAL 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   I + +    +L  A+ Y   R   G  +     ++    ++  D+      ++ 
Sbjct: 243 ERLIMGINAHARAEYALDYALQYMSERQAFGKTIDKYQALRHRFVELQADMEMCREYNYL 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A        R  +  Y    A I+K    KMA  VI + ++ +GG GY+E+  +AR  R
Sbjct: 303 VA-------YRLNKGEYVVKEATISKLKSTKMADEVIYDCLQFLGGYGYMEDYPLARLLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|209965240|ref|YP_002298155.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958706|gb|ACI99342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 597

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 163/387 (42%), Gaps = 67/387 (17%)

Query: 141 YLMAQLEAGHLMS----PSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           ++M +L  G  MS    P +T  ++ A+    +  + + + PK+ + E+  T        
Sbjct: 110 FVMEELMNGANMSFSMYPGLTHGAINAIKVHASDELKRRYLPKMIAGEWSGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   GTD+  I ++     DG Y ++G K F+S+   D       ++LA++
Sbjct: 162 -----MCLTEPHCGTDLGLIKTRAVPADDGSYRITGTKIFISAGEHDLTQNIIHLVLAKL 216

Query: 250 EGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                    +  F+VP+ L  ED  P   NG+    +++K+G +++AT  + F    G+L
Sbjct: 217 PDAPAGTKGISLFIVPKFLPTEDNRPGPRNGVMCGAVEHKMGIKASATCVMNFDEATGWL 276

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYARRR---HVSGGI- 348
           +G+      P + M+ +  + +A     GM+      V+   A+ YA+ R      GG  
Sbjct: 277 VGE------PHKGMRAMFTMMNAARLGVGMQGLGVATVAYQNAVAYAKDRLQGRSLGGTK 330

Query: 349 --------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYAR 394
                   +I  P +++ +         A AL + +    D      + + R E   +  
Sbjct: 331 APEQPADPIIVHPDVRKNLMTAKAFTEGARALGYWVGMMIDVYEKHPDPRVRQEAEDFVA 390

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K +           + +  GG GYI E  + +  R++    I  G+     LD+
Sbjct: 391 LLTPVVKAYFTDAGFETAVTSQQMYGGHGYIREWGMEQFVRDARIAMIYEGANGIQALDL 450

Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSS 479
           +   + +    L  + F  ++ +L ++
Sbjct: 451 VGRKMPQNMGRLLRRFFHPMQAELAAA 477


>gi|6449060|gb|AAF08800.1|AF184956_7 YngJ [Bacillus subtilis subsp. spizizenii ATCC 6633]
          Length = 380

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 33/270 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256
            GLTE   G+D     +Q + I++G  Y ++G K ++++      +++  V G+   G  
Sbjct: 123 FGLTEPNAGSDAGG--TQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKN 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
           ++  L+      GL      +K+G R + T E+        LL D+     N+   P + 
Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEI--------LLEDVRVPACNLLGDPTKG 232

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  +Y LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++
Sbjct: 233 FKQFLYTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAME 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +  + A   D  +  ++EAAYA++ A        +MA     +A++  GGSGY+
Sbjct: 293 IDLARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYM 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
           +E  + R  R+  A  + +G G + +  ++
Sbjct: 346 KEYGVERMLRD--AKLMEIGEGTSEIQRIV 373


>gi|262281092|ref|ZP_06058874.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257323|gb|EEY76059.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 600

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I S+ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFHVNADGTIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKDADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|184159453|ref|YP_001847792.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|239501702|ref|ZP_04661012.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|260557139|ref|ZP_05829355.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|332876295|ref|ZP_08444070.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183211047|gb|ACC58445.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193078318|gb|ABO13292.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
 gi|260409245|gb|EEX02547.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|322509367|gb|ADX04821.1| acdB [Acinetobacter baumannii 1656-2]
 gi|323519391|gb|ADX93772.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735567|gb|EGJ66619.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 600

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|326924088|ref|XP_003208264.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Meleagris gallopavo]
          Length = 433

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++ +K  D  Y ++G K W   +  +  F ++A  +   G     C
Sbjct: 177 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWITLAEHAGVFFVMANTDPASGYKGITC 235

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V R  E     GL   + ++K+G R+++T  + F N     + + N+     +  K  
Sbjct: 236 FIVDRDTE-----GLHVGKKEDKLGIRASSTCPVTFENV---KVPETNILGQIGQGYKYA 287

Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+     A+ Y + R   G  + D   M+  IA +A  + AA
Sbjct: 288 IGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGKRVFDFQAMQHQIAQVATQLEAA 347

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG G+ +   
Sbjct: 348 RLLTYNAARLAETGKPFIKEASMA-------KYYAAEVATLTTSKCIEWMGGVGFTKNYP 400

Query: 430 IARHYRESPANSILLGSGN 448
           I ++YR+    +I  G+ N
Sbjct: 401 IEKYYRDCKIGTIYEGTSN 419


>gi|241767637|ref|ZP_04765282.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361440|gb|EER57913.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 376

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 159/397 (40%), Gaps = 57/397 (14%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A  +  Q   + P   RWDK    P       +  H GL          P    
Sbjct: 7   QEMIRDAVRDFAQTELW-PNAARWDKEHHFP-------KEAHQGLAALGAYGICVPEEFG 58

Query: 131 QAH---KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYD 184
            AH      A  L  +A  + G   + SVT+  + A++      +  +DW          
Sbjct: 59  GAHLDYVTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL--------- 109

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P+ +  +     LTE   G+D +A+ +   K  D  Y ++G K F++S  +    
Sbjct: 110 ----TPLARGEMLGAFCLTEPHVGSDASALRTTAVKQGDE-YVINGVKQFITSGKNGHVA 164

Query: 245 MLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---- 294
           ++  V     G+ G   FLVP      +  G    RL++K+G  S+ T ++ F N     
Sbjct: 165 IVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDNCRIPA 219

Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               G       ++ G +E  +I I   S  M+ S    +LA    Y++ R   G  + +
Sbjct: 220 ENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFEAALA----YSKERESFGTPIFN 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +AD A  I AA  L +  A   D  K   +EAA A++ A        +MA  V
Sbjct: 276 HQAVGFRLADCATQIEAARQLIWHAAAMRDAGKPCLKEAAMAKLFAS-------EMAERV 328

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            + A++ +GG G + +  + R YR+     I  G+ +
Sbjct: 329 CSAAIQTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|111024023|ref|YP_706995.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823553|gb|ABG98837.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 180/409 (44%), Gaps = 70/409 (17%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A  A +  P  HA       WD+ +  P    +LR++   G+   I+ R
Sbjct: 8   ERAISDTARDFA--AEHLAP--HAV-----EWDQAKHFPV--DVLRKAASLGMG-GIYIR 55

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA----SMVALMT----TPRVHKDW 174
             E V   +  ++ AAR++   QL  G    PS+ +     +MV  M     T    + W
Sbjct: 56  --EDVGGSELTRVDAARIF--EQLAKG---CPSIAAYISIHNMVTWMIDRFGTDEQRRAW 108

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + S +         Q  S      LTE   G+D AA++++  +  D  Y L+G K F
Sbjct: 109 VPGLCSMD---------QLGSYC----LTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQF 154

Query: 235 LS-SPMSDAFIMLAQV-EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +S +  S+ ++++A+  EG    +  F+VP+    GSP GL +   + K+G  +  T ++
Sbjct: 155 ISGAGTSEVYVVMARTGEGGPRGISAFIVPK----GSP-GLSFGPNEVKMGWNAQPTRQV 209

Query: 290 EF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            F        N  G   G   ++   +   ++ I    A  SV G + +L  A+ Y   R
Sbjct: 210 IFEDVRVPAGNLLGSEGGGFRIAMAGLNGGRLNI----AACSVGGAQTALERAVAYLTDR 265

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITK 401
              G  L+D   ++  +AD+  ++ AA  L +R A +  D A    E  A A+  A  T 
Sbjct: 266 KAFGAPLLDSQALQFQLADMRTELEAARTLLWRAAAALEDGAPDVVELCAMAKRFATDTG 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +        V   A++  GG GY+ E  I +  R+   + IL GS   M
Sbjct: 326 F-------EVANRALQLHGGYGYLAEYGIEKIVRDLRVHQILEGSNEIM 367


>gi|169794774|ref|YP_001712567.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213157898|ref|YP_002320696.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482318|ref|YP_002324500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332852225|ref|ZP_08434030.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332870447|ref|ZP_08439211.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147701|emb|CAM85564.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213057058|gb|ACJ41960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987206|gb|ACJ57505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332729355|gb|EGJ60695.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332732184|gb|EGJ63452.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 600

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|330970886|gb|EGH70952.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGVMRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|307728568|ref|YP_003905792.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307583103|gb|ADN56501.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 396

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEENGKDTIRGFILERGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AEA  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  IARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364


>gi|307941533|ref|ZP_07656888.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307775141|gb|EFO34347.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 593

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 94/447 (21%), Positives = 179/447 (40%), Gaps = 72/447 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLM 152
           +V   P W  L  R I  G     W+    P     +     +  A L L         +
Sbjct: 69  EVSTPPGWKELYHRWIEGG-----WNGLSSPESAGGQGLPQMLSTAALELWNSGSMAFAI 123

Query: 153 SPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            P++T  ++ AL    + ++   +  K+ S E+  T             + LTE + G+D
Sbjct: 124 GPTLTIGAIEALEKHASDKLKATYLEKLVSGEWMGT-------------MNLTEPQAGSD 170

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLV 258
           + A+ S+ ++  DG Y + G K +++     M+D  + L         A   G +  FLV
Sbjct: 171 LNALKSKAERAGDGTYRIFGQKIYITYGEHDMTDNIVHLVLARLPDAPAGTRG-ISLFLV 229

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G   + T  + + +     G+L+G+ N     + 
Sbjct: 230 PKFLVNEDGSLGDRNDVRCAGVEHKMGIHGSPTCTMIYGDNDGAIGWLIGEENKGLACMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG------GILIDQPVMKRAI-- 359
            M     L   +  +     +  +A  YA  R    V G        +   P +KR++  
Sbjct: 290 TMMNNARLAVGVQGLGVAERACQDAYAYAMERKQGRVPGQKEEGMAPIAHHPDIKRSLLG 349

Query: 360 ----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                 +A  I  A A +  +AN+  +   ++  +  A ++ PI K         V +  
Sbjct: 350 MRARTQVARSICYACAHAIDMANTATDRDQKTFWSERAGLLTPIAKALSTDFGVEVASIG 409

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-------------NLLEKGT 462
           ++  GG GY+EE  +A+H R++    I  G+     +D++               +++  
Sbjct: 410 VQIHGGMGYVEETGVAQHLRDARIAPIYEGTNGIQSIDLIMRKLPLSGGDHVRGFIQELR 469

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRD 489
            + ++   +   DLG++G ++   L D
Sbjct: 470 EVADEAIQSNRDDLGTAGARLNAALAD 496


>gi|284167580|ref|YP_003405858.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017235|gb|ADB63185.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 374

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 29/269 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G   L+E   G++ A +T++ +   D  Y ++G K W  +   ++  I+ A
Sbjct: 109 PEMVTGRPVGAFALSEPEAGSNPAEMTTEARLEGDE-YVINGTKQWITNGERAEVVILFA 167

Query: 248 QVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           + +      V  FLVP+ +     +GL   + ++K+G R++ T  L F    G  +   N
Sbjct: 168 KTDRGDPDSVTQFLVPKDV-----DGLEVGKKEDKLGLRASDTTTLVFD---GVRIPAEN 219

Query: 304 VSTGPVEDMKILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             T   E +K    + +      A  +V   + +L ++I YA  R   G  +ID   +  
Sbjct: 220 RLTEVGEGLKAAFSILTGGRVGIASQAVGVAQAALDDSIAYANDREQFGKPIIDHQAIGH 279

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  D+ AA  L+ R A   +E    ++ AA A       KY+  + A  V  EA++
Sbjct: 280 KLADMQTDVQAARLLT-RDAARKNEGDVDAKSAAMA-------KYFASEAAVDVANEAVQ 331

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY ++  + R+YR++   +I  G+
Sbjct: 332 IHGGYGYTKDFDVERYYRDAKITTIYEGT 360


>gi|242089359|ref|XP_002440512.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor]
 gi|241945797|gb|EES18942.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor]
          Length = 410

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 135/294 (45%), Gaps = 37/294 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P     + PK+ S E+              IG L ++E   G+D+ ++  + +K+ DG 
Sbjct: 132 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 176

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +   ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 177 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 235

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IH 337
           + T EL F N F   +   NV     + + +++  LD   + ++G  + L +A     + 
Sbjct: 236 SDTCELVFENCF---VPRENVLGEEGKGVYVMMSGLDLERLVLAGGPIGLMQACLDVVLP 292

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++ A   + A
Sbjct: 293 YVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA 352

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                   + A  V  +A++C+GG+GYI E    R  R+  A    +G+G + V
Sbjct: 353 -------AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 397


>gi|52841104|ref|YP_094903.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296890|ref|YP_123259.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris]
 gi|52628215|gb|AAU26956.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750675|emb|CAH12082.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris]
          Length = 384

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 152/380 (40%), Gaps = 55/380 (14%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P     LR +   G+   +     E +   Q  ++ AA ++   QL  
Sbjct: 26  PMADFWDEQGYFPI--ETLREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78

Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           G + + +  S     AS+V    +  + K W PK+ S E             V     LT
Sbjct: 79  GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D A++ ++  K  +  Y L+G K F+S   +SD ++ + +        +   L+
Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310
           E  +P GL + +L+ K+G R+  T  L F N              GF +  LN   G   
Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+ G    L  +  Y   R   G  L     ++   AD+  D  AA 
Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +R A + D           A +   + K     +A  +  +AM+  GG GY+ +  I
Sbjct: 295 LMVYRAAAAMDNDDPN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            R +R+   + IL G+   M
Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368


>gi|330891274|gb|EGH23935.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|330501553|ref|YP_004378422.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915839|gb|AEB56670.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 148/338 (43%), Gaps = 51/338 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ------ 248
           + LTE   G+ ++ + ++ +   DG Y + G+K F+S    P+S+  +  +LA+      
Sbjct: 162 MALTEPHAGSSLSDLRTRAEPHVDGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPP 221

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  FLVP+    +DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFLVPKFHVNDDGSLGARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------I 348
           G     L+     + + +I + + + ++  +G   SL  A +  + R   G         
Sbjct: 281 GKPHAGLSYMFQMMNEARIGVGMGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPSSPQIS 340

Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +++   ++R      A  + A D+    A  F   ++ + A+ R+       ++ PI K 
Sbjct: 341 IVEHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTHTLETAEDRTRALELLDLLTPIVKS 400

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L       
Sbjct: 401 WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG------ 454

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
                    + Q+ G++ K+++ ++ D      E + L
Sbjct: 455 -------RKVSQNGGAALKQLLKLINDCCQRASEHESL 485


>gi|281202669|gb|EFA76871.1| acyl-Coenzyme A dehydrogenase [Polysphondylium pallidum PN500]
          Length = 591

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 26/270 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P   T +     L+E   G+D  A+ ++  K  D      G  W  ++  +  FI++A V
Sbjct: 322 PKLATEMVGSFCLSESSSGSDAFALKTRADKQGDYYVINGGKAWITNAKEAGVFIVMANV 381

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   L D +  GL   + ++K+G RS++T E+ F+        D+ V    V
Sbjct: 382 DPSAGYRGITAFLVDRNTPGLEVGKKEDKLGIRSSSTCEVIFN--------DVKVPASNV 433

Query: 310 -----EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                +  KI I  L+   + ++   + LAE      + Y  +R   G  + +   M+  
Sbjct: 434 LGQVGKGYKIAIEGLNEGRIGIAAQMLGLAEGAFESTLPYLMQRKQFGKPIAEFQGMQFT 493

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            AD+A+DI A   L++  A   +  K    EA+ A++       +C ++A  V +  +  
Sbjct: 494 YADLAVDIEAGKLLTYNAARLQEAGKPFVTEASMAKL-------YCSRIAEKVSSACITM 546

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448
           +GG G  +E    +++R+     I  G+ N
Sbjct: 547 LGGVGITKEFDAEKYFRDCKVGQIYEGTTN 576


>gi|257462359|ref|ZP_05626774.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           D12]
 gi|317060022|ref|ZP_07924507.1| acyl-COA dehydrogenase [Fusobacterium sp. D12]
 gi|313685698|gb|EFS22533.1| acyl-COA dehydrogenase [Fusobacterium sp. D12]
          Length = 637

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F++ +P +D +I+ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301
               +G   +   + +    G  +    +K+G RS++T +L F+N         G     
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            N++   ++  +I I    A  ++   + +  EA++YA+ R   G  +  Q  +   +AD
Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L +  A    E K   E       MA   K +   +A  ++ +A++  GG
Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365


>gi|152986838|ref|YP_001346001.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961996|gb|ABR84021.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       I+LA++    +G 
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L +     G  N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   V     I YAR R                  +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D   +S+ EE   A       + PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 405 GFESANHGVQIYGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLGRKVLMTQGEAL 464


>gi|54297867|ref|YP_124236.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris]
 gi|53751652|emb|CAH13074.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris]
          Length = 375

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L LTE   G+D+  + +Q     D        K+     ++D F++LA  +G     L  
Sbjct: 121 LALTESNIGSDLEHVETQLLDAGDEFILKGSKKYITLGQIADLFLVLANCQGE----LTA 176

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+E  +P GL    + N +G RSN   E+ F N       LLG++ +    V    I  
Sbjct: 177 VLVEKDTP-GLIITPMSNFLGLRSNMLAEIFFDNCRIPKTNLLGNIGIGFNCV----IQT 231

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD    + +   V L +A     + Y ++R      L +  ++++ I ++ + I AA  
Sbjct: 232 ALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQFDRRLDEHQLIQKMITEMVVQIKAARE 291

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L F       E + +   A  A  +  I KY   KMA  V   A++  G +G+ E   + 
Sbjct: 292 LCFYAG----ELRQQKNPAYIAETL--IAKYAASKMAVFVSNHALQLFGAAGFEETYPVE 345

Query: 432 RHYRESPANSILLGS 446
           R+YR++    I+ G+
Sbjct: 346 RYYRDAKVMEIIEGT 360


>gi|325121799|gb|ADY81322.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 384

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAMKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|91789797|ref|YP_550749.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91699022|gb|ABE45851.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 598

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 155/376 (41%), Gaps = 64/376 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTDEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++ +   DG Y L+G+K F+S+   D       ++LA++    +G  G   F V
Sbjct: 175 DLGLLRTKAEPQPDGTYKLTGNKIFISAGEHDMTSNIVHLVLARLPDAPQGSKGISLFAV 234

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  + +DGS    NG+    +++K+G   N+T ++   +  G ++G  N          
Sbjct: 235 PKFNVNKDGSLGARNGIYCGGIEHKMGIHGNSTCQMVLEDAVGTMVGAPNKGLA-----A 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353
           + + +++A + V    + L E     A+ YA+ R     +SG    D+P           
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIVHPDVR 349

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              +  +A A+    +A    L         + K R E      ++ PI K +       
Sbjct: 350 KMLLTAKAYAEGGRALAIYCTLLLDKELHHPDEKVRKESGEIVALLTPIVKAFLTDNGHI 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465
                M+  GG G+I+E  + +  R++  N I  G+     LD+L    L   G  L  F
Sbjct: 410 ATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGATLKKF 469

Query: 466 EQLFSTLEQDLGSSGK 481
            +L   L ++ G + K
Sbjct: 470 GKLIGALIEEEGVNEK 485


>gi|296162198|ref|ZP_06844994.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887584|gb|EFG67406.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 396

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AEA  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364


>gi|224007423|ref|XP_002292671.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana
           CCMP1335]
 gi|220971533|gb|EED89867.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana
           CCMP1335]
          Length = 447

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 17/248 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQG--QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           G+ ++E   GTD+  + S        DG + L+G K W  +    D F++ A+       
Sbjct: 178 GMCMSEPNAGTDVLGMRSNAVYDAKRDG-FVLNGTKMWITNEETGDLFLVYARTGTEKRT 236

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311
            +   ++E G       Q++ +K+G R++ T EL F N F      ++GD+N +T  +  
Sbjct: 237 DITQFIVEGGMEGFSVGQKINDKLGMRASPTAELVFENVFLPSKTHVVGDVNGATLCMMR 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAAT 370
              +  +  A M++   R SL E I YA  R   G   L     +++ IA+   +  A  
Sbjct: 297 NLEIERVALAAMAIGLARRSLDEMIAYAGNRPAFGKPNLYGFGQIQKHIAESYAEYMAGK 356

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +  ANS D        + Y   + A   K +C +M+  V   A++ +GG GY+ E +
Sbjct: 357 CYLYGFANSLD-------LSTYGHGLDADGVKLYCAQMSKNVADRAIQVLGGYGYVGEYT 409

Query: 430 IARHYRES 437
           + R +R+S
Sbjct: 410 VERLWRDS 417


>gi|195498051|ref|XP_002096360.1| GE25631 [Drosophila yakuba]
 gi|194182461|gb|EDW96072.1| GE25631 [Drosophila yakuba]
          Length = 405

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+     +  G    + ++K+G R ++T +L F +    ++   N+   P    K
Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKDNMLGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D+ +  ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|170761146|ref|YP_001787571.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408135|gb|ACA56546.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|117620593|ref|YP_856610.1| acyl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562000|gb|ABK38948.1| acyl-CoA dehydrogenase family member 8 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 407

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 51/315 (16%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           M+     P+V ++W P++ S E                 LG   LTE   G+D AA+ ++
Sbjct: 118 MLGSWLPPKVAEEWVPRLASGEL----------------LGSYCLTEPGAGSDAAALKTR 161

Query: 218 GQKISDG-IYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLC 271
              + DG  Y + G K F+S   S D  +++A+  G     +  F+VP         G+ 
Sbjct: 162 A--VRDGEDYVIDGSKVFISGAGSTDVLVVMARTGGEGAKGISAFMVP-----AQTPGVS 214

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMS 324
           Y + + K+G  S  T E+ FS       + LG        +   ++  +I I    A  S
Sbjct: 215 YGKAEEKMGWNSQPTREVNFSAVRIPARYRLGQEGEGFKFAMQALDGGRINI----ATCS 270

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383
           V   + +L +A+ + ++R   G  + +   ++  +AD+A ++AAA  L  + A   D  A
Sbjct: 271 VGTAQQALDDALAHVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAAARLDAGA 330

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             +S   A A+  A    +  C        +A++  GG GYI E  + R+ R++  + IL
Sbjct: 331 PDKSAWCAMAKRFATDVGHRICD-------DALQLFGGYGYIREYPLERYLRDTRVHRIL 383

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M L +   L
Sbjct: 384 EGTNEVMRLIIARRL 398


>gi|222109787|ref|YP_002552051.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221729231|gb|ACM32051.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 598

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 49/348 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTDEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++ +  +DG Y ++G+K F+S+   +       ++LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPQADGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G  N +    L++K+G   NAT ++      G L+G+ N     +  M 
Sbjct: 235 PKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPNKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK---- 356
               L     S+    V+   A+ YA+ R     +SG          I++   V K    
Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVHPDVRKMLLT 354

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +A A+ A  +     L    A+S  + K R +      ++ PI K +            
Sbjct: 355 AKAYAEGARALQIFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITDNGHIATNAC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           M+  GG G+I+E  + +  R++  N I  G+     LD+L     G N
Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN 462


>gi|163858095|ref|YP_001632393.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261823|emb|CAP44125.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 605

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 54/283 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D++ I ++     DG Y L G K F++    D       ++LA+V+G   
Sbjct: 161 MNLTESQAGSDLSQIATRAVPQDDGSYRLFGQKIFITYGEHDFAENIVHLVLARVQGAAA 220

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ L  +DG+    N +    L++K+G   + T  L F +      G   
Sbjct: 221 GISGLSLFVVPKYLVAQDGTLGPRNDVWCASLEHKLGIHGSPTAMLLFGD------GKGE 274

Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVS 345
           V  G V  +          + I ++SA  SV    V++++     A+ YA+ R      S
Sbjct: 275 VGQGAVGHLIGEAGHGLANMFIVMNSARFSVGLQGVAISDRAFQLALGYAKERLQGKGRS 334

Query: 346 GGILIDQPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           GG    QP+             +++ +    +A ATA    L+    +A  R+   A+  
Sbjct: 335 GG---SQPIAHHPDVQRMLMTMKSLTESMRALAYATAAHQDLSVHHPDADMRARHEAFFE 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + P+ K +C + +  V +  ++  GG G+IEE   A++YR++
Sbjct: 392 FLIPVLKGYCTETSLEVTSLGIQVHGGMGFIEESGAAQYYRDA 434


>gi|16124335|ref|NP_418899.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221233017|ref|YP_002515453.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13421179|gb|AAK22067.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220962189|gb|ACL93545.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 597

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 62/347 (17%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++    +DG Y ++G K ++
Sbjct: 152 PKMVSGEWTGT-------------MNLTEPHCGTDLGLLRTKAVPQADGSYKITGQKIWI 198

Query: 236 SS---PMSDAFI--MLAQVEGR------VGCFLVPRLLE--DGS----PNGLCYQRLKNK 278
           S+    M+D  +  +LA++EG       +  F+VP+ +   DGS      G     L+ K
Sbjct: 199 SAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFIPNADGSVGPRNEGAKCVGLEEK 258

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIH 337
           +G   NAT  +++    G+L+G+ N        +KI+ + ++ A + V    V+  EA +
Sbjct: 259 MGIHGNATCVMQYDEAVGYLIGEEN------SGLKIMFVMMNEARLGVGMQGVAQGEAAY 312

Query: 338 YA---------RRRHVSG--------GILIDQPVMKRAIADIALDIAAA------TALSF 374
            A         + R ++G          +I  P ++R + +    I         TAL  
Sbjct: 313 QAAVAFAKDRLQGRSLTGPKNAEGPADPIIVHPDVRRMLLESKALIEGGRAFLFWTALHG 372

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L++   +   R + + Y  +M P+ K +       V + A++  GGSG+ E   +++  
Sbjct: 373 DLSHVHPDPAVREKSSDYMGLMTPVLKGYLTDKGFQVCSNAVQVHGGSGFTEHFPVSQFM 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
           R+     I  G+     LD++   L  KG       F  ++Q +G +
Sbjct: 433 RDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEIDQFIGEN 479


>gi|114047951|ref|YP_738501.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889393|gb|ABI43444.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 596

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++    +DG + ++G K F+SS     +D  +  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP++L   DGS    N L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350
                +  M     L   +  +    ++   A+ YA+     R +SG          IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +   A AL  + A   DEA+  S+       A  A +  P+ K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
                    +A +  GG GYI E  + +  R+S    I  G+     LD++   LL    
Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460

Query: 463 NLFEQLFSTLEQDLGSSGK 481
              +Q  + + + + S GK
Sbjct: 461 AAMQQWSALVTEFIQSQGK 479


>gi|289582550|ref|YP_003481016.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532103|gb|ADD06454.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 379

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 45/292 (15%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + ++W PK+ + E   T    M          ++E   G+++A I +  +   DG Y L+
Sbjct: 105 MKEEWLPKVANGE---TASCSM----------ISEPAHGSNVAGIETVAEADGDG-YVLN 150

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G+K W  +  ++D  +++A+     G   +   L +   +G+  +++ NK+G R++   E
Sbjct: 151 GNKMWITNGTVADVGVLMAKTSPDEGHRGITAFLVEMDTDGISTEKIDNKLGIRASDLAE 210

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE----- 334
           +        ++ D+ V   P E++         +++ +  S   SV+   V  A+     
Sbjct: 211 V--------VVDDVRV---PEENVIGEVDKGFYQLMEFFASGRTSVASQAVGAAQGALDA 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA  R   G  + +   ++  +A++A  + AA +L++R A   +  ++  + AA   
Sbjct: 260 AIDYAGEREQFGQKIKEFQAIEHKLAEMATRVEAARSLTYRAATEVE--QNNQDVAAQFS 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            MA   K +  ++A  V  E ++  GGSGY+ +    R+YR++    I  G+
Sbjct: 318 SMA---KLFASEIAVEVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366


>gi|239624683|ref|ZP_04667714.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521069|gb|EEQ60935.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFL 257
             +TE   G+D AAIT+  +K  D  Y L+G K F+++ P  D   + A+ +    G   
Sbjct: 119 FAITEPGAGSDTAAITTTAEKDGD-YYILNGRKCFITNGPCCDFVTVFAKTDVNARGVKG 177

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   + + +  G     ++NK+G   + T +L F N     +   N+  G  +  KI + 
Sbjct: 178 ISAFIVESAWEGFSTGAVENKMGMHGSPTCDLIFENV---RVPKENLLGGEGQGFKICMA 234

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  ++V+   + +A     EA+ Y + R   G  +      +  IAD+A  +     
Sbjct: 235 TLDSGRITVATQGLGIAQGALDEAVKYVKERVQFGKPIAKLQNTQFEIADMATRVECGRQ 294

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   D  +  S+ AA A       KY+C  +   +   +++  GG GY+++  I 
Sbjct: 295 LVYNAARLKDAGQPYSKNAAMA-------KYYCGDLCNNIAYRSLQLHGGYGYMKDYPIE 347

Query: 432 RHYRESPANSILLGS 446
           R +R++   +I  G+
Sbjct: 348 RMFRDARLVAIYEGT 362


>gi|71282509|ref|YP_268983.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71148249|gb|AAZ28722.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 606

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 45/339 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  + ++ +   DG Y ++G K F+S+   D       I+LA++    +G 
Sbjct: 165 LTEPQCGTDLGQVKTKAEPNGDGTYNITGTKIFISAGEHDLTDNIIHIVLARLPDAPKGT 224

Query: 253 VGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP++   +DG+    N +    +++K+G +++AT  L F N  G L+G  N  
Sbjct: 225 RGISLFIVPKVKASQDGTLGDFNNVTCGSIEDKMGIKASATAVLNFDNAVGELIGPENKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352
              +        L +A+  V    ++   ++ YA+ R              V+  I++  
Sbjct: 285 LECMFTFMNTARLGTALQGVCSAELAFQNSLIYAKERLSMRSLTGKKFPEQVADPIIVHP 344

Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEE-AAYARI--MAPITKYWCCKM 407
            V K  +   A+       + +  ++ +    AK+  E  AA  R+  + PI K +  ++
Sbjct: 345 DVRKMLMTQKAISEGGRAMIYYTAKIVDDISMAKTEEERLAADDRLGFITPILKAFLTEL 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                   ++  GG GYI+E  + +  R+   +++  G+     LD+L           +
Sbjct: 405 GSESANHGLQIFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLG---------RK 455

Query: 468 LFSTLEQDLGSSGKKVITILRDS--ISLCKEDKGLARFL 504
           +  T  + L    K+V+   +D+  IS     + + RF+
Sbjct: 456 ILMTRGKSLNDFSKEVLGFCKDNSLISSNPHKRQMNRFI 494


>gi|322806444|emb|CBZ04013.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|260548811|ref|ZP_05823033.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260407979|gb|EEX01450.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 600

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGTIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|229023875|ref|ZP_04180359.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228737462|gb|EEL87973.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
          Length = 583

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 41/317 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 140 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 185

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 186 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 242

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 243 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 296

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 297 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 356

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 357 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 416

Query: 452 LDVLNLLEKGTNLFEQL 468
           L V  +L K    FEQ+
Sbjct: 417 LTVAKMLMKQ---FEQI 430


>gi|111019512|ref|YP_702484.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819042|gb|ABG94326.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 397

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 41/267 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------- 252
           L+E   G+D+A I+ +  +  D  + +SG K W   +  +D  ++ A+ + +        
Sbjct: 132 LSEAEAGSDVANISCRATRDGDD-WVISGTKMWCTYADEADYLVLFARTDPKKDPAKPHR 190

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLL 299
            +  FL+ +    G P G+   +++ KIG    +T EL F N              GF L
Sbjct: 191 GISAFLIEKQ-RGGFPVGISGTKIR-KIGYFGWSTWELSFDNFRVPATAMLGEEGKGFYL 248

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               +  G            +A  ++   R +L ++I Y   R   G  L D   ++  I
Sbjct: 249 AVSGLEVGRAH---------TAARAIGLARGALEDSIAYLHTRRQFGHELADFQHLRFKI 299

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +A DI AA  L + +A   D  +  S EA+  +++A        +MA  V +EA++  
Sbjct: 300 AKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKLVA-------TEMAERVTSEAVQIH 352

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY  +  + RH+R++    I  G+
Sbjct: 353 GGAGYTTDFQVERHWRDARLTKIFEGT 379


>gi|93006279|ref|YP_580716.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393957|gb|ABE75232.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 594

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 40/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252
           LTE   GTD+  I ++     DG Y +SG K F++     ++D  I  +LA+     EG 
Sbjct: 166 LTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGS 225

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L  EDGS    N L    +++K+G +++AT  + F +  G+++G  N  
Sbjct: 226 KGISLFVVPKFLVNEDGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------------HVSGGILI 350
              +  M I++  +   M + G+    ++   A  YA  R                  +I
Sbjct: 286 ---LSSMFIMMNYERVTMGLQGLGGSELAYQNAALYANDRGQGRSDTQLQSPEKPADAII 342

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
               ++R + +   +  A+   +  +A + DE K  ++       AA   ++ P+ K + 
Sbjct: 343 HHADVRRMLLNAKANTEASRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKAFL 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              A     +  +  GG GYI E  + +  R++    I  G+     LD+L
Sbjct: 403 TDKALEATIDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLL 453


>gi|94311466|ref|YP_584676.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355318|gb|ABF09407.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans
           CH34]
          Length = 378

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 29/298 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A + T    + W P I +            KT +A+ +  TE  GG+D+ A  +  
Sbjct: 96  APYIARLGTEEQKQRWLPDICA-----------GKTILAVAI--TEPGGGSDVKACRTTA 142

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +  D  + ++G K F+S+   SD  +++ + +   G   V  +L + +  G    R  +
Sbjct: 143 VRDGDE-WVINGSKTFISNGFCSDMVMVVCKTDPAAGARGVSLILVETNREGFRRGRKLH 201

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV-EDMKILIYLDSAIMSVSGMRVSLA 333
           K+G  S  T EL F N     G LLG++N   G +  D+    ++  A+ + + +   L 
Sbjct: 202 KVGMHSQDTAELFFDNVRVPAGNLLGEVNKGFGYLMHDLAQERFI-IAVTAAAKIERLLE 260

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALD-IAAATALSFRLANSFDEAKSRSEEAAY 392
           + I Y + R   GG + D    K  +AD+  + +A  T + + L        S  EEAA 
Sbjct: 261 QTIEYVKDRKAFGGTVWDFQNTKFKLADVKANAVALRTMVDYYLGEHMRRRLS-GEEAAI 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A++ A   ++ C       I + ++  GG GY+ E  IAR + +     +  GS   M
Sbjct: 320 AKLHATEVQWKC-------IDDMVQLHGGYGYMLEYPIARAFVDMRVARVYGGSNEVM 370


>gi|323137353|ref|ZP_08072431.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397340|gb|EFX99863.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 576

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 46/296 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+A + ++ ++  DG Y L G K F++    D       ++LA++     
Sbjct: 161 MNLTEPQAGSDLALLRTRAERAGDGTYRLFGQKIFITYGEHDLADNIVHLVLARLPDAPP 220

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFG---FL 298
               +  FL P+ L D   NG   +R       +++K+G   + T  + + +  G   +L
Sbjct: 221 GTKGISLFLAPKFLPD--ENGAFTRRNDLRCGGVEHKLGIHGSPTCTMIYGDNGGAVAYL 278

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-------VSG 346
           +G+ N     +  M     +++A ++V    V+LAE     A+ +AR R        V  
Sbjct: 279 VGEENKGLACMFTM-----MNNARLAVGLQGVALAERSTQHALAWARERKQGRAPGAVQT 333

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEA-AYARIMAPIT 400
             +++ P + R +  +A   AA+ A+ +  A + D A+      R+ EA   A ++ P+ 
Sbjct: 334 SAIVEHPDVARMLMTMAGMTAASRAICYETAAAIDRARREKNPVRAAEAEERASLLTPVA 393

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +   +A    +  ++  GG GY+EE   A+  R++    I  G+     +D++ 
Sbjct: 394 KAFSTDIANEATSLGVQVFGGMGYVEETGAAQLMRDARICGIYEGTNGIQAIDLVT 449


>gi|229144927|ref|ZP_04273324.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228638649|gb|EEK95082.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
          Length = 569

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR+S  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDSRISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|170755992|ref|YP_001781803.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|169121204|gb|ACA45040.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|108800147|ref|YP_640344.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869275|ref|YP_939227.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770566|gb|ABG09288.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695364|gb|ABL92437.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 399

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 20/289 (6%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +  R   PT    M  +     LG+TE   G+D+A
Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G   
Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R  +K+G R + T EL F +       L+G  N  +G ++ M+      L  A+ + + 
Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A+ +AR R   G  L  + +++  +A++A  +  A   +  +   +   +   
Sbjct: 274 AGRALDLAMSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            E +    MA  T  + C     V+ EA++  GG GY+ E  I RHYR+
Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375


>gi|212544850|ref|XP_002152579.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065548|gb|EEA19642.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
          Length = 426

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  ++ A++E  G++ 
Sbjct: 162 FGLTEPNHGSDPGSMETVAREHPTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIK 221

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FL+ R      P  L    +KNK   R++ T  ++  N       +L D    +GP   
Sbjct: 222 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPVENMLPDAEGLSGP--- 276

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G+  +L ++I  AR     R+   G  L    ++++ +AD + D
Sbjct: 277 ---FTCLNSARLGIAFGVTGALEDSISRAREYALDRKQFRGNPLAKYQLIQKKLADASTD 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   D  KS  E       M  + K   C  A A      E  GG+   
Sbjct: 334 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 386

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 387 DEYHIGRH 394


>gi|182680173|ref|YP_001834319.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182636056|gb|ACB96830.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 589

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 35/288 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+  + +      DG Y +SG K F+SS   D       ++LA++ G   
Sbjct: 163 MALTEAQAGSDLGLLKATATPREDGSYTVSGSKIFISSGDQDLSENVIHLVLARLPGAPA 222

Query: 253 ----VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FL P+ L  ED   GS N +    L++K+G  +  T  + + ++ G+L+G+ N
Sbjct: 223 GSRGISLFLCPKFLVNEDGSLGSRNNVNVGSLEHKMGIHAQPTCVMNYDDSQGWLVGEPN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR---HVSGGI----LIDQP 353
                +  M  ++  +   + V G+     S   A  YA+ R      GG     +I+ P
Sbjct: 283 RG---LNAMFTMMNAERLFVGVQGLGLAEASYQTAASYAKERKQGRTPGGKDTTSIIEHP 339

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            +++ +  I   + AA AL+   A   D+ K+  +EA          ++ P+ K      
Sbjct: 340 DVRKMLLTILSFVEAARALTVFTALEMDKEKAHQDEATRKTASGLIALLTPVVKAAFTDF 399

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                    + +GG GYI E    +  R++    I  G+      D++
Sbjct: 400 GFEATVLGQQVLGGHGYIREWGQEQFVRDARIAMIYEGTNGIQAQDLV 447


>gi|168179877|ref|ZP_02614541.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|182669242|gb|EDT81218.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|163931094|pdb|2VIG|A Chain A, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931095|pdb|2VIG|B Chain B, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931096|pdb|2VIG|C Chain C, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931097|pdb|2VIG|D Chain D, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931098|pdb|2VIG|E Chain E, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931099|pdb|2VIG|F Chain F, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931100|pdb|2VIG|G Chain G, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931101|pdb|2VIG|H Chain H, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
          Length = 391

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 124 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKSI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 183 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 231

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 232 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 292 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 344

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 345 VTEMPAERHYRDARITEIYEGT 366


>gi|309776307|ref|ZP_07671295.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915903|gb|EFP61655.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 379

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A   +   K  DG Y L+G K F+++   +D +++ A  +   G   +
Sbjct: 123 FGLTEPNAGTDAAGQQTTAVKDGDG-YILNGTKIFITNAGEADVYVIFAMTDKTKGTHGI 181

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P G    + + K+G R +AT EL F+N     LG  ++     +  KI   
Sbjct: 182 SAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNV---RLGKEHLLGQEGKGFKI--- 234

Query: 318 LDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              A+M++ G R+ +A            E + Y + R   G  +      +  +AD+ + 
Sbjct: 235 ---AMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLADMQVK 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +  A   ++    S EAA A++ A        ++A  V  +A++ +GG GY 
Sbjct: 292 TDAARWLVYDAAMKKEKGLPYSVEAAKAKLFA-------AEVAMEVTTKAIQLMGGYGYT 344

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R +R++    I  G+
Sbjct: 345 RDYPVERMFRDAKITEIYEGT 365


>gi|226949464|ref|YP_002804555.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
 gi|226841710|gb|ACO84376.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 377

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDHYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|28867730|ref|NP_790349.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28850965|gb|AAO54044.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|15616361|ref|NP_244666.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176424|dbj|BAB07518.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 379

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + +   K  D  Y L+G K F+++   +D +++ A      G   +
Sbjct: 123 FGLTEPSAGSDAANLKTTALKQGDH-YRLNGSKVFITNGGAADTYVVFASTNPSAGRKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G    + + K+G   + T EL F +    L+   N+     +  KI +  
Sbjct: 182 SAFIVEKETPGFTVGKKEKKMGLHGSNTTELIFEDA---LVPKENLLGVEGDGYKIAMAN 238

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++  + ++   + +AEA       YA+ R   G  +  Q  +   +AD+A  + AA  L
Sbjct: 239 LEAGRIGIAAQSLGIAEAALEAATSYAKERKQFGKSIGQQQAIAFKLADLATQVEAAKLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A    +  S ++E++ A++ A        K A     EA++  GG GY +E  + R
Sbjct: 299 TYRAAQLKQQGISCAKESSMAKLFA-------SKTAMKAAIEAVQIFGGYGYTKEYPVER 351

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 352 YFRDAKVCEIYEGT 365


>gi|119504013|ref|ZP_01626094.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine
           gamma proteobacterium HTCC2080]
 gi|119460016|gb|EAW41110.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine
           gamma proteobacterium HTCC2080]
          Length = 382

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 16/289 (5%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +H +      SR   P  KA   P   T   +G L +TE   G+D+ +I +   +  D  
Sbjct: 91  IHSNIIAPYLSRHGTPEQKAHWLPRMVTGECVGALAMTEPGAGSDVQSIRTNAVRDGDE- 149

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++ + +D  I+ A  +   G       L D    G    +   KIG  ++
Sbjct: 150 WVLNGSKIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTS 209

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L F++       LLG+ N     + D      L  A  +V+    +L   + Y + 
Sbjct: 210 DTALLFFTDVRLPADALLGEANKGFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +AD+  DIA   A   +    +      SEEAA  ++ +    
Sbjct: 270 REAFGQKIGGFQNTRFKLADVKTDIAINRAFYEKCTEKYANEDLSSEEAAMLKLAS---- 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              C+M   V  + ++C GG GY  E  I+R Y ++    I  G+   M
Sbjct: 326 ---CEMQCRVADQCLQCFGGYGYTTEYPISRFYVDARIQPIYGGTSEIM 371


>gi|56421928|ref|YP_149246.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261420798|ref|YP_003254480.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297531593|ref|YP_003672868.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319768468|ref|YP_004133969.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56381770|dbj|BAD77678.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261377255|gb|ACX79998.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297254845|gb|ADI28291.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317113334|gb|ADU95826.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 380

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 35/297 (11%)

Query: 183 YDPTNKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           Y   N+   QK   A+  G       L+E   G+D+A++ ++  K  D  Y L+G K W 
Sbjct: 99  YKFGNEEQKQKYLRALATGEKLGAYALSEPGAGSDVASMKTRAVKDGDH-YILNGSKVWI 157

Query: 235 LSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            +   ++ +++ A  +       +  F+V    E G+P G  + + + K+G RS+ T EL
Sbjct: 158 TNGGEAEIYVVFAVTDPEKRHKGISAFIV----EKGTP-GFSFGKKEKKLGIRSSPTTEL 212

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
            F +     +   N+     E  KI ++ LD     ++   V +A+     A+ YA++R 
Sbjct: 213 IFEDC---RIPKENLLGQEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRV 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +I+Q  +   +AD+A  I AA  L+++ A          + +A A++ A  T   
Sbjct: 270 QFGKPIIEQQGVAFKLADMATAIEAARLLTYQAAWLESNGLPYGKASAMAKLFAGDT--- 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               A  V  EA++  GG+GY ++  + R  R++    I  G+     L +  +L +
Sbjct: 327 ----AMKVTVEAVQIFGGNGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|213967729|ref|ZP_03395876.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382366|ref|ZP_07230784.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302130681|ref|ZP_07256671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213927505|gb|EEB61053.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|331015047|gb|EGH95103.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 601

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|19684166|gb|AAH25963.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo
           sapiens]
 gi|123982738|gb|ABM83110.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic
           construct]
 gi|123997405|gb|ABM86304.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic
           construct]
 gi|311349322|gb|ADP91826.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349344|gb|ADP91837.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349370|gb|ADP91850.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349376|gb|ADP91853.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
          Length = 412

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKSI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|87120142|ref|ZP_01076038.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86164844|gb|EAQ66113.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 388

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 35/289 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T +  + + PK+ S E+              IG L ++E   G+D+ ++    +   D  
Sbjct: 110 TQKQKETYLPKLVSGEH--------------IGALAMSEPNAGSDVVSLKLHARDEGDH- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P ++ +++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 155 YVLNGNKMWITNGPDANVYVIYAKTDLHAGSKGITAFIVERDSEGFTQAQKLDKLGMRGS 214

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G L G + V  G ++  ++++    A   +  M+ ++  A+ 
Sbjct: 215 NTCELVFQDCKVPKENILGELNGGVKVLMGGLDYERLVL----AGGPLGIMQAAMDVAVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  + +  +++  IAD+   + AA +  + +A S D  ++  ++AA   +  
Sbjct: 271 YIRDRQQFGKAIGEFELVQGKIADMYTRMNAAKSYVYMVAMSADRGETTRKDAAGVIL-- 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +  +MA  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 329 -----YAAEMATQIALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 372


>gi|299770613|ref|YP_003732639.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700701|gb|ADI91266.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 600

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  E+ +  E+  ++      + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q     +  + L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIDQFIGQQQSSETLKPYLEKLAELKQQWLSLTKTIAEKAKHNPEEIGAAS 521


>gi|239609836|gb|EEQ86823.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 428

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D +++ S  +      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F++ R  +   P  L    +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   DE KS  E       M  I K   C  A        E  GG+   
Sbjct: 336 AAYGTLAAVQVARLNDEGKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 389 DEYHIGRH 396


>gi|5596622|gb|AAD45605.1|AF160729_1 isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana]
 gi|21592889|gb|AAM64839.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
          Length = 409

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K+ DG Y L+G+K W  + P ++  ++ A+ + + G   +
Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F N F   + + N+     + + +L+  
Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266

Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L+  +++      M+  L   + Y R+R   G  + +   ++  +AD+   + ++ + 
Sbjct: 267 LDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GYI E +  R
Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 380 LLRDAKLYEIGAGT 393


>gi|322368778|ref|ZP_08043345.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320551509|gb|EFW93156.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 384

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 129/269 (47%), Gaps = 23/269 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+      +G  ++E   G+D++++++  +K  D  + ++G+K W  +  + D F+++ 
Sbjct: 111 APVAAGDAVMGTAISEPDTGSDVSSVSTTAEKDGDE-WVINGNKMWITNGSIGDYFVVMT 169

Query: 248 QVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           + +     R   F   +++ +   +G    ++  K+G R++ T EL F +     + + N
Sbjct: 170 KTDPDADDRYAGF--SQIIVESDRDGFEADKITGKLGIRASDTAELIFDDV---RVPEEN 224

Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
            V T  +  ++++ + D    +V+   V +A+     A+ YA+ R   G  + D   ++ 
Sbjct: 225 LVGTRGMGFLQLMQFFDETRTAVAAQGVGIAKGACERALDYAQEREQFGRSISDFQAIQH 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++     AA  L+++ A S      +  +      +A + K +  ++A     EA++
Sbjct: 285 KLAEMHTKTEAARNLTYKSAWSVANGDGQLTQ------LASMAKEFSSRVAVECADEAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GGSGY+ +  + R YR++    I  G+
Sbjct: 339 IHGGSGYVNDFDVERLYRDAKITQIYEGT 367


>gi|302062363|ref|ZP_07253904.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato K40]
          Length = 601

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361
               L +A+  ++   V+    + YAR R              +   +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +        A+ +  A   D      + + +    A    M PI K +  ++        
Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L
Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464


>gi|284997063|ref|YP_003418830.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
 gi|284444958|gb|ADB86460.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
          Length = 371

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A   +  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANETVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|119714508|ref|YP_921473.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535169|gb|ABL79786.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFL 257
           L+E   G+D AA+ ++ ++  D  Y L+G K W      +D + ++A+     G + CFL
Sbjct: 127 LSEPHAGSDPAAMRTRARRDGD-EYVLNGAKAWTTHGGHADFYKVMARTGDQRGDISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           VP         GL     ++K+G   +AT  + F +       LLG      G  + +KI
Sbjct: 186 VP-----ADTPGLSADPPEHKMGLTGSATATMRFDDVRIPAERLLG------GEGDGLKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LD+  + ++ +   LA+     A+ YA+ R   G  +ID   +   +AD+   + +
Sbjct: 235 ALAGLDAGRLGIAAVATGLAQGALDRAVAYAQERETFGRRIIDHQGLAFVLADMEAAVQS 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A +   A   D       EA+ A+++A          A  V  +A++ +GG GY  + 
Sbjct: 295 ARATTLHAARLKDAGLPYGREASVAKLVA-------TDNAMRVTTDAVQVLGGYGYTRDF 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            + R+ RE+    I  G+     + +   L++ T
Sbjct: 348 PVERYMREAKVMQIFEGTNQIQRMVISRALDRST 381


>gi|295707243|ref|YP_003600318.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804902|gb|ADF41968.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 375

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++ ++  D  Y L+G K F+++   +D +I+ A+     G   +  
Sbjct: 123 LTEPSAGSDAASLKTKAERKGDH-YLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312
            + + +  G    + ++K+G   + TV+L F N        + V   PVE+         
Sbjct: 182 FIVEKTMEGFSVGKDEHKMGLHGSRTVQLHFEN--------MQV---PVENRLGEEGEGF 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +I +  L++  + ++   V +AE     A +YA  R+  G  ++ Q  +   +AD+   +
Sbjct: 231 RIAMANLNAGRIGIAAQAVGIAEGALTAAKNYANERYQFGKPILSQQGIAFKLADMETAV 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L +R A  +D+     +EA+ A++ A  T       A  V  +A++ +GG GY++
Sbjct: 291 ESAKLLMYRAAFLYDQKLPCKKEASMAKLFASQT-------AMNVAIDAIQVLGGYGYMK 343

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R++R++    I  G+
Sbjct: 344 DYPVERYFRDAKVCEIYEGT 363


>gi|301631915|ref|XP_002945040.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 389

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 29/262 (11%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVE 250
           A+   L+E+  G+D AAIT+      DG + + G K W  +   S+ FI+ A        
Sbjct: 117 AVNFALSERAAGSDAAAITTTAVHEGDG-WRIRGEKCWLGNGGHSEHFIVFALTGESGAR 175

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNV 304
             +  F VPR     S  G      ++K+G R   T   +       S+  G     L +
Sbjct: 176 NNISAFWVPR-----STPGAAVDFYEDKMGIRGTTTTNFKLDVWRPRSSMVGSEGHGLKL 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   +   +I++   +  +++   R     A+ +A +R   G  +ID   +   +AD A 
Sbjct: 231 ALSTLTIGRIVVAAQALGIALCSYRA----AVEFATQRQTFGQAIIDHQGVGFMLADAAT 286

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            ++A   + +  A ++DE +  S   A A++ A    +  C        +AM+ +GG GY
Sbjct: 287 HLSATRMMVYEAAKAYDEGRDVSTLGAMAKLFASEAAHKVCD-------DAMQILGGRGY 339

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++   + R YR+     I  G+
Sbjct: 340 VKPSVVERCYRDQRITEIYEGT 361


>gi|154247194|ref|YP_001418152.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154161279|gb|ABS68495.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 596

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 33/290 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+AA+ ++  K +DG Y + G K F+S    D       ++LA++     
Sbjct: 160 MNLTEPQAGSDLAALRAKAVKQADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPA 219

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----NTFGFLL 299
               +  FLVP++L +     G  N +    +++K+G   + T  + F        G+L+
Sbjct: 220 GTRGISLFLVPKVLVNADGSFGERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLV 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI-----LIDQ 352
           G+ N     +  M     L   I  V+    +   A  YA  RR+  + G      +I  
Sbjct: 280 GEENRGLACMFTMMNNARLAVGIQGVAVAERATQRAFAYAKDRRQGKAPGFEGSAPIIAH 339

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCK 406
           P +KR +  +  +  AA A+  + A++ D A       +R+   A A ++ P+ K +   
Sbjct: 340 PDVKRMLLTMRAETDAARAICLKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTD 399

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +   V +  ++  GG GY+EE   A+H R++   +I  G+     +D++ 
Sbjct: 400 IGIEVASTGVQVHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVT 449


>gi|254304392|ref|ZP_04971750.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324584|gb|EDK89834.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 636

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +   K  D  Y L+G K F+++  +++ +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGDH-YILNGEKIFITNADVAETYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T +L F+N     +   N+    
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  V+ +A++  GGS
Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|116193399|ref|XP_001222512.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88182330|gb|EAQ89798.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 446

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 24/275 (8%)

Query: 187 NKAPMQKTSVAIGLGLTEKRG---------GTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL   EK G         G+D+ ++ ++ +++ DG Y L+G K W  +
Sbjct: 160 NGSPEQKQKYLPGLISGEKVGALAMSESGSGSDVVSMRTRAKEV-DGGYILNGSKMWITN 218

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            P +D  ++ A+     G   +   + D  SP   C ++L +K+G R + T EL F N F
Sbjct: 219 GPDADVVVVYAKTVPDGGSKGITAFIVDTASPGFTCLRKL-DKMGMRGSNTGELVFENLF 277

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQ 352
                 L    G V  +   + L+  ++S      M+ +L  A+ YA  R   G  +   
Sbjct: 278 VPAENVLGAVNGGVRVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHTRKQFGTPVAQF 337

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAV 411
            +++  +AD+   + A+ A ++  A + DE    R+++ A A + A      C       
Sbjct: 338 QLVQGKLADMYTKLQASRAYTYATARAVDEQGLIRTQDCAGAILYAAERATECA------ 391

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A++ +GG GY+EE   +R  R++    I  G+
Sbjct: 392 -LDAIQVLGGMGYVEEMPASRIMRDAKLYEIGAGT 425


>gi|91781939|ref|YP_557145.1| putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685893|gb|ABE29093.1| Putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 396

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-RGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AEA  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364


>gi|322417928|ref|YP_004197151.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320124315|gb|ADW11875.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 582

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  +  +     +DG  Y L+G K F++ S  +D F + A+++G+    FLV
Sbjct: 146 LTEPDCGSDPLSSRTTAVLSADGTHYILNGAKQFITNSSFADLFTVFAKIDGKHFSAFLV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            +  E     G      + K+G + ++T  L   +       LLG++        ++  +
Sbjct: 206 EKGFE-----GFSVGAEEKKMGLKGSSTTPLVLQDVKVPVANLLGEVGKGHKIAFNVLNV 260

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A  ++   + +  ++  Y+  R   G ++ D   +K  +AD++  I A+ ++ +R
Sbjct: 261 GRLKVATQTLGMAKAAFGDSAAYSAERKQFGRVIGDFGAIKEKLADMSAAIFASESVIYR 320

Query: 376 LANSFDEAKSRSEEAA---YARIMAPI---------TKYWCCKMAPAVIAEAMECIGGSG 423
           +A   D   +  +      Y R    I          K +C +    V+ EA++  GG G
Sbjct: 321 VAGLLDGQIATLDHGGPDYYERYQKAIEEFAAECAIAKVFCTEQLDFVVDEAVQIHGGYG 380

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI E ++ RHYR+S    I  G+
Sbjct: 381 YISEYAVERHYRDSRIQRIFEGT 403


>gi|170722319|ref|YP_001750007.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760322|gb|ACA73638.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 595

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)

Query: 155 SVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
            +T  +++AL    +P + +D+  K+ S E+  T             + LTE + GTD+A
Sbjct: 126 GLTEGAVLALHRHGSPELKRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLA 172

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPR 260
            + ++ +   DG Y +SG K F+S     ++D  I L         A V G +  FLVP+
Sbjct: 173 LLRTRAEPQGDGSYRISGSKIFISGGDQDLTDNIIHLVLARLPDAPAGVRG-ISLFLVPK 231

Query: 261 L--LEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                DG    PN L    L++K+G +  AT  + F    G+L+G+ N     +  M   
Sbjct: 232 FECAADGGPGVPNALGCGALEHKMGIKGAATCVMNFDGARGWLVGEANQGLACMFTM--- 288

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRR------------HVSGGILIDQPVMKR- 357
             ++ A   V    + +AEA     + YAR R              S   +I  P ++R 
Sbjct: 289 --MNDARFQVGLQGLGIAEAAFQGGLTYARERLQSRSLAGPVAPERSADPIICHPDVRRM 346

Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
                 +++    +AA  A +  L +   + + ++     A ++ P+ K +   +   V 
Sbjct: 347 LLTQKTLSEGCRMLAAYAAQALDLEHGAAQPEVQAAAGRRAALLIPVVKAFLTDVGQEVA 406

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  ++  GG GYI E  + +  R+S    +  G+     LD++
Sbjct: 407 SLGVQLYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLV 449


>gi|120555033|ref|YP_959384.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120324882|gb|ABM19197.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 382

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 34/305 (11%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           AL T   VH D      S   +   K    P   +  A+G + +TE   G+D+ A+ +  
Sbjct: 84  ALSTNVMVHSDIVAPYLSHIGNEQQKQQWLPKMVSGEAVGAIAMTEPGAGSDLQAMRTSA 143

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y L+G K F+++   +D  I+ A+ + + G   +   L D S  G    R  +
Sbjct: 144 VKDGDD-YILNGSKTFITNGQHADMVIVAAKTDPKAGAKGISLFLVDTSLPGFSKGRNLD 202

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI---------MSVS 326
           KIG  S  T EL FS        D+ V    +  E+ +  +YL   +         + V+
Sbjct: 203 KIGQHSGDTSELFFS--------DMRVPASALLGEEGQGFVYLMRELPRERLVIGALGVA 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKS 385
             R SL   I YA+ R + G  L      +  IA +  D        +R+  +F D+   
Sbjct: 255 AARGSLDMTIQYAQERELFGQKLSQLQNTRFEIARMETD--------YRINKAFVDQCIR 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             EE       A + KY   +M   V    ++  GG GY  E  I+R++ ++    I  G
Sbjct: 307 EYEEGKLDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTTEYPISRNFIDARVQRIYGG 366

Query: 446 SGNAM 450
           +   M
Sbjct: 367 TSEVM 371


>gi|294651448|ref|ZP_06728762.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822694|gb|EFF81583.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 593

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 161/386 (41%), Gaps = 55/386 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++   +D       ++LA+          +  F+VP+ L  EDGS    N +    +++
Sbjct: 197 FITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNPVGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  +G    ++P         ++R + ++  +  A+ A +  +    D  K 
Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A  +      ++ PI K +    A     +A    GG GYI E  + +  R+   
Sbjct: 377 STDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRI 436

Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKE 496
             I  G+      D++   +++ G     +  + + +D  ++    +  ++D ++    E
Sbjct: 437 AQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI-RDFANTLDADLNFIKDATLDAATE 495

Query: 497 DKGLARFLTEKIA----LASSAAALY 518
            + + +F+ E+ A      +SAA  Y
Sbjct: 496 IEAVTQFIIEQAAENVEFPNSAAVDY 521


>gi|17647119|ref|NP_080102.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Mus musculus]
 gi|26006698|sp|Q9DBL1|ACDSB_MOUSE RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|12836415|dbj|BAB23646.1| unnamed protein product [Mus musculus]
 gi|148685767|gb|EDL17714.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b
           [Mus musculus]
          Length = 432

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++  K S   Y L+G K W   +  ++ F++ A V+   G     C
Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     G    + +NK+G R+++T +L F N     + + N+        K  
Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV---KVPETNILGKIGHGYKYA 286

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  + D   ++  +A +A  + A 
Sbjct: 287 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEAT 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ +E +GG GY ++  
Sbjct: 347 RLLTYNAARLVEAGRPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 399

Query: 430 IARHYRESPANSILLGSGN 448
           + + +R++   +I  G+ N
Sbjct: 400 VEKFFRDAKIGTIYEGASN 418


>gi|25453062|sp|Q9FS88|IVD1_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 1, mitochondrial;
           Short=IVD 1; Flags: Precursor
 gi|10129808|emb|CAC08233.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum]
          Length = 412

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 35/289 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + + PK+ S ++              IG L ++E   G+D+ ++  +  ++ DG 
Sbjct: 134 TPDQKQKYLPKLISGDH--------------IGALAMSEPNAGSDVVSMKCRADRV-DGG 178

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P+++  I+ A+ +   G   +   ++E   P     Q+L +K+G R 
Sbjct: 179 YVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGITAFIIEKEMPGFSTAQKL-DKLGMRG 237

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMS---VSGMRVSLAEAIH 337
           + T EL F N F   +   NV     + + +L+    L+  +++   V  M+  +   I 
Sbjct: 238 SDTCELVFENCF---VPKENVLGQEGKGVYVLMSGLDLERLVLAAGPVGIMQACMDIVIP 294

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +  +++  +AD+   + ++ +  + +A   D  K   ++ +   ++A
Sbjct: 295 YVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLA 354

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   + A  V  +A++C+GG+GYI E    R  R++    I  G+
Sbjct: 355 -------AERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAAGT 396


>gi|299532697|ref|ZP_07046085.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298719332|gb|EFI60301.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 598

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 171/401 (42%), Gaps = 68/401 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP   K +  K+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258
           D+  + ++ + ++DG Y ++G+K F+S+   D       ++LA++ +  VG      F+V
Sbjct: 175 DLGLLRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVV 234

Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P  ++  DGS    N +    L++K+G   NAT ++      G L+G+ N          
Sbjct: 235 PKFKVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQ---PVMKRAIAD 361
           + + +++A + V    + L E     A+ YA+     R +SG    D+   P++      
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349

Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             L  A A A   R  ++F            + K R +      ++ PI K +       
Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465
               + +  GG G+I+E  + +  R++  N I  G+     LD+L    L  +G  L  F
Sbjct: 410 ATTLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            +L + L ++ G + K  ++     I++  E   + +F TE
Sbjct: 470 GKLIAQLVEEEGVNEK--MSEFITPIAMLGEQ--MTKFTTE 506


>gi|227829855|ref|YP_002831634.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|227456302|gb|ACP34989.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
          Length = 371

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 35/262 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM K  +     LTE  GG+DI ++ +  +K  +G++ + GHK W      +D F+ + +
Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160

Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301
                  +  F+VPR        G C +  K ++ GNR   T E+ F +   +  +++G+
Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           +N     V  +     L+   +++SG+ + LAEA       +AR R   G  + D   ++
Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              AD    + A  +++  ++N FDE +K +    A  ++++ I       +A   +  +
Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANETVDIS 320

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG GY +  +I R YR++
Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342


>gi|224368186|ref|YP_002602349.1| Acd4 [Desulfobacterium autotrophicum HRM2]
 gi|223690902|gb|ACN14185.1| Acd4 [Desulfobacterium autotrophicum HRM2]
          Length = 379

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 34/282 (12%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
           + E   T   P+ +  +     LTE   G+D  + T+   +  D  Y ++G K F++S  
Sbjct: 103 TEEQKQTFLVPLAQGEIIGAFALTEPDAGSDPVSQTTTAVR-DDNNYVINGTKRFITSGK 161

Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            S A I+ A+ +       +  FLV +     +P GL    +++K+G R++ T +L F N
Sbjct: 162 NSRAVIVTAKTDETARHKGISAFLVAK----DTP-GLIVGHMEDKMGLRASDTTDLIFEN 216

Query: 294 T---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
                  LLG+        +  KI +  LDS  + ++   + +A+A     + YA++R  
Sbjct: 217 CRVPASALLGNEG------DGFKIAMAGLDSGRIGIAAQSLGVAQAALDASVKYAKKRKQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +   ++  IAD+A  I AA  L    A+  D  ++ + +A+ A++ A       
Sbjct: 271 FGKAIANHQGIRWQIADMATQIEAARQLVMSAASMKDRKENYTTQASMAKLFA------- 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +M   V A A++  GG G+ ++  + R YR++   +I  G+
Sbjct: 324 SEMVNQVTARAIQIHGGYGFTKDYPVERFYRDARVFTIYEGT 365


>gi|32450737|gb|AAH54428.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Mus musculus]
          Length = 432

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++  K S   Y L+G K W   +  ++ F++ A V+   G     C
Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     G    + +NK+G R+++T +L F N     + + N+        K  
Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV---KVPETNILGKIGHGYKYA 286

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  + D   ++  +A +A  + A 
Sbjct: 287 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEAT 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ +E +GG GY ++  
Sbjct: 347 RLLTYNAARLVEAGRPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 399

Query: 430 IARHYRESPANSILLGSGN 448
           + + +R++   +I  G+ N
Sbjct: 400 VEKFFRDAKIGTIYEGASN 418


>gi|31982522|ref|NP_031409.2| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Mus musculus]
 gi|16740777|gb|AAH16259.1| Acyl-Coenzyme A dehydrogenase, short chain [Mus musculus]
 gi|74151647|dbj|BAE41170.1| unnamed protein product [Mus musculus]
 gi|74199397|dbj|BAE33217.1| unnamed protein product [Mus musculus]
 gi|148687936|gb|EDL19883.1| acyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Mus
           musculus]
          Length = 412

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  ++  D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA  R+  G  L     ++  +AD+AL + 
Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALE 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++E+A A++ A        + A A+  +A++ +GG GY+ E
Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 375

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 376 MPAERYYRDARITEIYEGT 394


>gi|75762983|ref|ZP_00742780.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218897304|ref|YP_002445715.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228900950|ref|ZP_04065163.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228965323|ref|ZP_04126415.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74489529|gb|EAO52948.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218543929|gb|ACK96323.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228794313|gb|EEM41827.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228858648|gb|EEN03095.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 569

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPVENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|308270656|emb|CBX27267.1| hypothetical protein N47_I06870 [uncultured Desulfobacterium sp.]
 gi|308272123|emb|CBX28731.1| Acyl-CoA dehydrogenase [uncultured Desulfobacterium sp.]
          Length = 387

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256
           G  +TE   G+D+ AI S  +   D  + L+G K W  ++ ++DA I  A  +   G   
Sbjct: 123 GFAITEPDAGSDVMAIKSIAEDKGDH-WLLNGSKTWISNANVADAVIYYAYTDKAAGAKG 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L   ++E  + NG+    L +K+G+RS+ T E+  ++T    +   N+   P +  KI+ 
Sbjct: 182 LSAFVVELKNFNGIRTTDL-DKMGSRSSPTGEIYLTDT---KVPKENIIGKPGDGTKIVF 237

Query: 317 -YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+   +S +   V LA+A       YA  R   G  +    + +  +  +  +I AA 
Sbjct: 238 GSLNQTRLSAAAGGVGLAQACLDVVTKYAMERKQFGQEIGKFQMNQDMVGQMNAEIEAAR 297

Query: 371 ALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L +R A + DE   +   E A A+  A  T   C   A       M  +G  GY  E  
Sbjct: 298 FLVYRAACTKDEGNLNNGLEVAQAKYFAGETASKCANYA-------MRILGAYGYSTEYP 350

Query: 430 IARHYRESPANSILLGSGN 448
           +AR+YR++P  +++ GS N
Sbjct: 351 VARYYRDAPTYTMVEGSAN 369


>gi|302917934|ref|XP_003052548.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733488|gb|EEU46835.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 426

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 30/278 (10%)

Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           N +P QK          TSV   L ++E   G+D+ ++ +  + + DG Y L+G K W  
Sbjct: 142 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRTTAKAV-DGGYVLNGSKMWIT 199

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + P +D  ++ A+ E       +   L D    G    R  +K+G R + T EL F N F
Sbjct: 200 NGPDADVIVVYAKTEPDKASKGITAFLVDTKTEGFSCARKLDKMGMRGSNTGELMFDNVF 259

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349
                +LG +N   G V  +   + L+  ++S      M+ +L  A+ +  +R   G  +
Sbjct: 260 VPTENILGKIN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQFGQPI 316

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMA 408
                ++  +AD+   + A+ A ++  A + DE    R+++ A A +       +  + A
Sbjct: 317 AHNQFLQGKLADMYTKLQASRAYTYMTAKAVDENGLIRTQDCAGAIL-------YAAERA 369

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + ++ +GG GY+EE   +R  R++    I  G+
Sbjct: 370 TECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 407


>gi|261198997|ref|XP_002625900.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239595052|gb|EEQ77633.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 428

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D +++ S  +      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F++ R  +   P  L    +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   DE KS  E       M  I K   C  A        E  GG+   
Sbjct: 336 AAYGTLAAVQVARLNDEGKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 389 DEYHIGRH 396


>gi|322434140|ref|YP_004216352.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321161867|gb|ADW67572.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 387

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 22/254 (8%)

Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLV 258
           L+E   G+D  A+ ++  Q+ SD  Y L+G K W  ++  +  +++ A ++  +G   + 
Sbjct: 131 LSEAASGSDAFALQTRATQRGSD--YVLNGQKLWITNAKEAGLYLVFATLDPALGYKGIT 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
             ++E G+P G    + ++K+G R+++T EL F +    ++G   V   P +  KI I  
Sbjct: 189 GFVVEKGTP-GFSVGKKEDKLGIRASSTCELVFQDC---VVGADQVLGEPGKGYKIAIET 244

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+   + +    + LA      A  +A+ R   G  L++   M+  +A++A +I  A  +
Sbjct: 245 LNEGRIGIGAQMLGLASGAWGHAAKWAKERKQFGKALVEFQAMQFQLAEMATEIEMAKLM 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   D      +EAA       + KY   ++A    + A+E  GGSG+++E  + +
Sbjct: 305 VYNAARLKDNGSEFLKEAA-------MCKYVASQVAEKTASLAVEVFGGSGFVKEFPVEK 357

Query: 433 HYRESPANSILLGS 446
            YR++    I  G+
Sbjct: 358 LYRDAKIGKIYEGT 371


>gi|110677891|ref|YP_680898.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109454007|gb|ABG30212.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 381

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 41/320 (12%)

Query: 160 SMVALMTT------PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
            +V L+TT       +  +D W P I +            KT VA    +TE   GTD++
Sbjct: 86  GLVELITTLLVTHGTQAQRDMWLPDILA-----------AKTKVA--YCITEPEAGTDVS 132

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            I +   +  +G     G  W  ++P++D   +LA+ +   G   +   + D   +G+  
Sbjct: 133 GIRTTAVRDGEGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFVVDLHADGVAR 192

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              ++K+G R++    L F N       LLG    + G    M ++  LD   + ++ + 
Sbjct: 193 GPKEHKMGQRASQVGPLHFDNVTLPAHALLG----AEGRGFHM-MMSVLDKGRVGIAALA 247

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V + +     A+ YA +R      + +   ++  +ADIA D+ AA  L+   A+  D   
Sbjct: 248 VGIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDIGA 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++  + A+  A         MA A  A+A++  GGSGYI+   + R YR++    I  
Sbjct: 308 DATKACSMAKCFA-------GDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQIYE 360

Query: 445 GSGNAMVLDVL-NLLEKGTN 463
           G+     + +   LL KG +
Sbjct: 361 GTNQIQRMIIARELLAKGAD 380


>gi|332285292|ref|YP_004417203.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429245|gb|AEC20579.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 397

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 24/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K +DG Y +SG+K W  +
Sbjct: 115 FGSEEQKQKYLPKLASGAWIGCFGLTEPNHGSDPGSMETRAVKTADG-YKVSGNKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSN 293
           SP++D F++ A+V G      +   + D    GL    +  K+G R++ T E+   E   
Sbjct: 174 SPIADVFVVWAKVVGGDDDGKIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDEVEI 233

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348
           +   +L  ++   GP         L+SA   ++   +  AEA  H AR+    R   G  
Sbjct: 234 SAEQMLPKVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFGRP 287

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  DI  A     RL    D+  +  E       +  I K   C  A
Sbjct: 288 LAQNQLIQKKLADMQTDITLALQGCLRLGRMKDDGTAAVE-------ITSIMKRNSCGKA 340

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 341 LDIARMARDMLGGNGISDEFGVARH 365


>gi|229133184|ref|ZP_04262017.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228650273|gb|EEL06275.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
          Length = 615

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 23/279 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +      DG  + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 194 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 253

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +++   I   S AT+ LE       N  G       V  G    + I
Sbjct: 254 RTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 304

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 305 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESA 364

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 365 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             + R YR++  + I  G+     L V  +L K     E
Sbjct: 425 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQIEQIE 463


>gi|15230664|ref|NP_190116.1| IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA
           dehydrogenase [Arabidopsis thaliana]
 gi|110816334|sp|Q9SWG0|IVD_ARATH RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|4995051|emb|CAA73227.1| Isovaleryl-CoA Dehydrogenase [Arabidopsis thaliana]
 gi|6967096|emb|CAB72479.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
 gi|110738147|dbj|BAF01005.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana]
 gi|332644499|gb|AEE78020.1| isovaleryl-CoA-dehydrogenase [Arabidopsis thaliana]
          Length = 409

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K+ DG Y L+G+K W  + P ++  ++ A+ + + G   +
Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F N F   + + N+     + + +L+  
Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266

Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L+  +++      M+  L   + Y R+R   G  + +   ++  +AD+   + ++ + 
Sbjct: 267 LDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GYI E +  R
Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 380 LLRDAKLYEIGAGT 393


>gi|21230969|ref|NP_636886.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769029|ref|YP_243791.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112588|gb|AAM40810.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574361|gb|AAY49771.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 382

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K  DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D +  G    + + K+G R++AT E+EF++   ++     V     E  K  +  
Sbjct: 183 TAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVLGAEGEGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A+++A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLIASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|327438662|dbj|BAK15027.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 380

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 36/317 (11%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L +G  +   + +  + A  T  +  K W PK  + EY                + +T
Sbjct: 80  AGLASGISLHSDIVTPYIEAYGTAAQKEK-WLPKSVTGEYISA-------------IAMT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL--VPR 260
           E   G+D+A I +  +K  D  Y L+G K F+++ + +D  +++ + + +       +  
Sbjct: 126 EPGAGSDLAGIQTTAKKDGD-FYILNGEKTFITNGIHADYVVVVCKTDPQASPAYKGISL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMK 313
           L+ +    G    +  +KIG  S  T EL F +       LLG+ N         ++  +
Sbjct: 185 LIVESGTAGFKRGKKLDKIGMHSADTGELIFEDVRVPAENLLGEENRGFYYLMEKLQQER 244

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +++ L++ I +   ++++    + Y + R   G  + D    +  +A++A +I       
Sbjct: 245 LIVALETQIEAECCLKLT----VDYVKERKAFGSRIADFQNTQFKLAEMATEIDLGRTYV 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             L       +   +E + A       K+W  +MA  V+A+ ++  GG GY+EE  IAR 
Sbjct: 301 DSLIAKHIAGQDIVKEVSMA-------KWWISEMAKRVVADCLQLHGGYGYMEEYEIARR 353

Query: 434 YRESPANSILLGSGNAM 450
           YR+ P  +I  G+   M
Sbjct: 354 YRDIPVAAIYAGTTEIM 370


>gi|262374895|ref|ZP_06068129.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145]
 gi|262309908|gb|EEY91037.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145]
          Length = 593

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 47/316 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y +SG K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYSISGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L  EDGS    N +    +++
Sbjct: 197 FITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSIGERNPVGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  +G    ++P         ++R + ++  +  A+ A +  +    D  K 
Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A  +      ++ PI K +    A     +A    GG GYI E  + +  R+   
Sbjct: 377 STDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGLEQCIRDLRI 436

Query: 440 NSILLGSGNAMVLDVL 455
           + I  G+      D++
Sbjct: 437 SQIYEGTNGVQSQDLI 452


>gi|119476267|ref|ZP_01616618.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119450131|gb|EAW31366.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 561

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 55/335 (16%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG L++    +A  +    TP   + W P++ S E           T  AI +  TE   
Sbjct: 247 AGSLITRPEIAARALLKGGTPAQQQQWLPRLASAE-----------TLCAISI--TEPDF 293

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-------FLVP 259
           G+D+A+I+ +     +G + L+G K W   +  ++  + LA+ +   G        FLV 
Sbjct: 294 GSDVASISLKATPTENG-WLLNGSKTWCTFAGQAELLVTLARTDTDSGLGFKGLSMFLVE 352

Query: 260 RLLEDG------SPNGLCYQRLKNK----IGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +    G       P G    RL  K    IG R   + +L F + F   + + N+  G  
Sbjct: 353 KPAFSGHQFDYQQPQG---GRLIGKSISTIGYRGMHSFDLFFEDYF---VAENNLVGGEE 406

Query: 310 EDMKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              K   +         + +A  +   M+ +  +A+ YAR R V    + +  + +  +A
Sbjct: 407 GKGKGFYFTMAGLSGGRIQTAARATGVMQAAFEQAVSYARERKVFAKPIGEYQLTQVKLA 466

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +   I A+   S+ +A   D+ K + E        A + K + C+ A  V  EAM+  G
Sbjct: 467 RMLAAITASRQFSYAVARMMDDGKGQME--------ASLVKLFSCRSAEWVTREAMQIHG 518

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           G GY EE +++R++ ++   SI  G+   + L V+
Sbjct: 519 GMGYAEETAVSRYFVDARVLSIFEGAEETLALKVI 553


>gi|40063113|gb|AAR37960.1| acyl-CoA dehydrogenase [uncultured marine bacterium 561]
          Length = 382

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 16/289 (5%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +H +      SR   P  KA   P   T   +G L +TE   G+D+ +I +   +  D  
Sbjct: 91  IHSNIIAPYLSRHGTPEQKAHWLPRMVTGECVGALAMTEPGAGSDVQSIRTNAVRDGDE- 149

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++ + +D  I+ A  +   G       L D    G    +   KIG  ++
Sbjct: 150 WVLNGSKIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTS 209

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L F++       LLG+ N     + D      L  A  +V+    +L   + Y + 
Sbjct: 210 DTALLFFTDVRLPADALLGEANKGFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +AD+  DIA   A   +    +      SEEAA  ++ +    
Sbjct: 270 REAFGQKIGGFQNTRFKLADVKTDIAINRAFYEKCTEKYANDDLSSEEAAMLKLAS---- 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              C+M   V  + ++C GG GY  E  I+R Y ++    I  G+   M
Sbjct: 326 ---CEMQCRVADQCLQCFGGYGYTTEYPISRFYVDARIQPIYGGTSEIM 371


>gi|264679027|ref|YP_003278934.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209540|gb|ACY33638.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 596

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 158/334 (47%), Gaps = 55/334 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDALKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ +   DG Y + G K F++     M+D  +  +LA+V G       +  F+V
Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358
            M I++      + + G+ V+      A+ YA+ R     V G +     +I  P ++R 
Sbjct: 288 YMFIMMNAARYAVGLQGLAVAERAYQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRM 347

Query: 359 IADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +  +         +A A A ++  A+   +A+ R     +   M P+ K +  +M+  V 
Sbjct: 348 LMTMRASNEGCRAMATAAAAAYDAAHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441


>gi|196009394|ref|XP_002114562.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens]
 gi|190582624|gb|EDV22696.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens]
          Length = 370

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+  Q + ++DG  + L+G K W  +S  +D F++ A      G     
Sbjct: 114 LSEFGSGSDAFAL--QTRAVADGDHFVLNGTKAWISNSEHADIFLVFANASPEKGYKGIT 171

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF+V R +      GL   + ++K+G R+++T  +   N     + + N+     E  KI
Sbjct: 172 CFIVERNMP-----GLSLGKKEDKLGIRASSTCPVILENV---RVPESNIMGKFGEGYKI 223

Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            I  L+   +S++   V LA+     AI Y   R      + D   ++  IA+++  +AA
Sbjct: 224 AIGILNEGRISIASQMVGLAQGALDAAIPYTMERKQFNQRIFDFQGVQHQIAEMSTMVAA 283

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+++  A      K   +E A A       KY+  +MA  V ++A+E +GG G+ ++ 
Sbjct: 284 ARAITYDAARLKVAGKPVVKEGAMA-------KYFASEMAQKVSSKALEWLGGVGFTKDF 336

Query: 429 SIARHYRESPANSILLGSGN 448
            + + YR++    I  GS N
Sbjct: 337 PVEKFYRDAKIGVIYEGSSN 356


>gi|302550362|ref|ZP_07302704.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467980|gb|EFL31073.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 383

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 53/306 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   +    + W P + S E              A+G  GLTE   G+D   + ++
Sbjct: 95  AKTVAAWGSEEQRRRWLPGLTSGE--------------AVGCFGLTEPGTGSDAGNLATR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y ++G K F+++   +D  ++ A+     G      FLVP     G+P GL 
Sbjct: 141 AVRDGDD-YVINGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVP----TGTP-GLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI----MSV 325
            + +  K+G R  AT EL        +L D+ V    +  ++ K      SA+    MSV
Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRVPASALLGQEGKGFSIAMSALAKGRMSV 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  
Sbjct: 247 AAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIAVDVDAARLLTWRVADLI 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +S + E++ A++ A        + A      A++  GG GYI+E    +  R++   
Sbjct: 307 DRGQSFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVM 359

Query: 441 SILLGS 446
           ++  G+
Sbjct: 360 TLYEGT 365


>gi|324515384|gb|ADY46184.1| Short/branched chain specific acyl-CoA dehydrogenase [Ascaris suum]
          Length = 420

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 24/268 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ +  +K  D  Y ++G K W  ++  +  FI++A V+  +G   +  
Sbjct: 161 LSESTSGSDAFALKTTAKKDGDD-YVITGSKMWTSNAANAHFFIVMANVDPSMGYKGITT 219

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            L D    G+   + ++K+G R+++T  + F +       +LG++          KI I 
Sbjct: 220 FLVDRHLKGVEVGKKEDKLGIRASSTCPVHFDDVRVNKDMVLGEVG------NGYKIAIE 273

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L++  + +    V LAE      I Y + R      +ID   ++  IADIA  I  A  
Sbjct: 274 CLNAGRIGIGAQMVGLAEGCFEATIPYLQERKQFNKRIIDFQGIQHQIADIATQIETARL 333

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   + +    +EAA A       K++   +A    ++ +E +GG G+ +   + 
Sbjct: 334 LVYNTARMKEASIDYVKEAAMA-------KWYSSVVATNTTSKCIEWMGGVGFTKSYPVE 386

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLE 459
           ++YR+    +I  G+ N  +  +  L++
Sbjct: 387 KYYRDCKVGTIYEGTSNIQLNTIAKLID 414


>gi|289674344|ref|ZP_06495234.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae FF5]
          Length = 592

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSVGERNAVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYA------------RRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA            + +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++ A  R      ++ P++K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N   
Sbjct: 405 IGLETTIHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAL 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|170726269|ref|YP_001760295.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169811616|gb|ACA86200.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 596

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 39/303 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247
           + LTE   GTD+A + ++     +G + +SG K F+SS    +++  I L         A
Sbjct: 162 MNLTESHAGTDLALLRTKAVDAGEGFFAISGEKIFISSGDHDLAENIIHLVLARLPDAPA 221

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  F VP+ L  +DGS    N LC   L++K+G   N+T  + F    G L+G+ 
Sbjct: 222 GVKG-ISLFAVPKYLVNDDGSIGDANKLCATGLEHKMGIHGNSTCVMNFDGALGELVGEP 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVM 355
           +     +  M     L   +  +    ++   A+ YA+ R    G+       +   P++
Sbjct: 281 HQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALIYAKGRIQGRGLSGVKAPEMAADPIL 340

Query: 356 -----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
                      ++A  + A  +    AL    A      +   E +  A +  PI K + 
Sbjct: 341 VHGDVRRMLMSQKAFNEGARAMMGQQALWLDKAERHSNPEKAKEASKLAALFTPIVKGFV 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
                    +A +  GG GYI E  + +  R+     I  G+     LD++    L +KG
Sbjct: 401 TDRGFNACVDAQQVFGGHGYIHEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKILSDKG 460

Query: 462 TNL 464
             L
Sbjct: 461 AAL 463


>gi|329888448|ref|ZP_08267046.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847004|gb|EGF96566.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 387

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 30/276 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248
           +Q   +   + +TE   G+D+  + +   K  D  Y L+G K F+++     FI++    
Sbjct: 122 LQSGELVGAIAMTEPGAGSDLQGVKTTAVKQGDH-YVLNGSKTFITNGQLANFIIVVAKT 180

Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
              EG  G  L+   LE     G    R  +KIG  +N T EL F++       ++GD  
Sbjct: 181 DPAEGAKGTSLI--CLETDGAEGFERGRNLHKIGMEANDTSELFFNDVKVPLENVIGDTE 238

Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G V+ M+ L    L+ A+  V+     L   + Y + R   G  +ID    +  +A+
Sbjct: 239 -GQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLAYVKERKAFGKRVIDFQNTQFKLAE 297

Query: 362 IALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           I   +  A       +   L    D A             A + KYW   +    I E +
Sbjct: 298 IKTKLTVAKVFVDHCIGLHLKGQLDAA------------TASMAKYWVTDIQGETIDEML 345

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +  GG GY+ E  IA+ Y+++    I  G+   M L
Sbjct: 346 QLFGGYGYMTEYPIAQLYKDARVQRIYGGTNEIMKL 381


>gi|300310260|ref|YP_003774352.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073045|gb|ADJ62444.1| acyl-CoA dehydrogenase oxidoreductase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 382

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 34/303 (11%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  T   V    A  I  +   PT K     P+ +  +     LTE   G+D AAI ++ 
Sbjct: 80  ATSTIVSVQNSLACGITEKYGSPTQKEQWLKPLARGEMLGCFCLTEPHTGSDAAAIRTRA 139

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCY 272
           ++  D  + L+G K F++S       ++  V  R      + CFLVP         G   
Sbjct: 140 ERDGDD-FILNGTKQFITSGKHAGVAIVFAVTDRSAGKKGISCFLVP-----CDTPGFVV 193

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSV 325
            R + K+G  ++ TV++   N       LLG       ++   +E  +I I    A  SV
Sbjct: 194 GRSEEKMGQHASDTVQIMLDNCRVPATALLGKEGEGYRIALSNLEAGRIGI----AAQSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +   A+ YAR+R   G  +I+   +   +AD+   + AA  + +R A   D+ + 
Sbjct: 250 GMARAAFEAAVSYARQRESFGVPIIEHQAVNFRLADMNTLLDAARLMVWRAAQLKDQGRP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +EA+ A++ A        + A  + ++A++  GG GY  +  + R YR+     I  G
Sbjct: 310 CLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIYEG 362

Query: 446 SGN 448
           + +
Sbjct: 363 AND 365


>gi|293606863|ref|ZP_06689211.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814715|gb|EFF73848.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 391

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 20/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + ++E   G+D+ ++ +   +  D +Y ++G K F+++ + +D   ++A+ +   G  G 
Sbjct: 133 IAMSEPGAGSDLKSVRTTAARDGD-VYVINGSKTFITNGLHADLICVVAKTDPSAGTRGV 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  ++E     G    +L  K+G +S  T EL F +       LLG+     G  + M
Sbjct: 192 SLI--MVETLDLPGFRRGKLLEKLGQKSLDTAELFFDDVRVPVANLLGEAE-GQGFTQLM 248

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L    L  A+ +V+ MR ++ + + Y + R V G  LID       + +    +A   
Sbjct: 249 QQLPRERLLIAVGAVATMRRAIDDTVAYTKTRQVFGQALID-------LQNTRFKLAECE 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++   A   D+  +R  +       A + K+W  +M   VI E ++  GG GY+ E  I
Sbjct: 302 TIATIAARFVDDCIARQLQGTLDLSTAAMAKWWTTQMNCQVIDECLQLHGGYGYMLETPI 361

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR Y ++    I  GS   M
Sbjct: 362 ARMYADARVGKIYGGSNEIM 381


>gi|156740271|ref|YP_001430400.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231599|gb|ABU56382.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 383

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 33/267 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D  A T    ++ +G + ++G K W  S+ ++   I+ A  +      +   
Sbjct: 125 LTEPHAGSDAGA-TRTTARLENGEWVINGAKMWITSASIAGHLIVTAVTDPGERHAISAI 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +VP     G+P GL + + + K+G R + T  + F N       LLG            +
Sbjct: 184 IVP----AGTP-GLSFGKPEPKMGLRGSITNAVTFENVRVPEANLLGRRGRGL-----QQ 233

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LD   + +  M + LA+A       YAR R   G ++     +   IAD+A+ + A
Sbjct: 234 FLAVLDGGRIGIGAMAIGLAQAAFEVASAYARERTAFGKLIGAYESVSNMIADMAVGLEA 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A   D+ +  S EAA A++ A       C+       +A++ +GG GY  E 
Sbjct: 294 ARLLVYQAAWLKDQGRQYSREAAIAKLYASEVGEKICR-------DAIQVLGGYGYSSEY 346

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
            + R YR+     + +G G + +L V+
Sbjct: 347 PLERIYRDQ--RLLTIGEGTSEILRVV 371


>gi|70730430|ref|YP_260171.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68344729|gb|AAY92335.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 375

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ ++  D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARRDGDH-YVLNGCKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  G
Sbjct: 170 TDPAAGKRGISAFIVP----TDSP-GYKVARIEDKLGQHASDTCQILFEDVKVPLANRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  ++ I    A  SV   R +   A  YAR R   G  +I+   + 
Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERETFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  K        A + A + K +  +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKP-------ALVEASMAKLFASEMAEKVCSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLSDFPVERIYRDVRICQIYEGTSD 365


>gi|294626169|ref|ZP_06704775.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294667554|ref|ZP_06732769.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599521|gb|EFF43652.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292602674|gb|EFF46110.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 597

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 151/356 (42%), Gaps = 58/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y+R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|257066844|ref|YP_003153100.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256798724|gb|ACV29379.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 379

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
             LTE   GTD     + GQK     DG  Y L+G K F+++   +D +++ A  +   G
Sbjct: 122 FALTEPDAGTD-----ASGQKTVAKLDGDHYVLNGSKIFITNAGYADTYVVFAMTDKEQG 176

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312
              +   + +    G  +  +++K+G + ++T+EL F         D  V    +  E+ 
Sbjct: 177 TRGISAFIVEKGMEGFDFGTVEDKMGIKGSSTMELIFR--------DCKVPKENLLGEEG 228

Query: 313 KILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K   Y    LD   + ++   + +AE     A+ Y + R+  G  L      +  +A++A
Sbjct: 229 KGFKYAMQTLDGGRIGIAAQALGIAEGALDKAVKYVKERNQFGRPLAKFQNTQFKLAEMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +DI +A  L ++ A   D  +S +  AA A++ A        ++A  V  +A++ +GG G
Sbjct: 289 IDIESARHLVYKAATLKDAGESYTVAAAEAKLKAS-------RVAMDVTTKAVQLLGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI+E  + R  R++    I  G+   M++ V   L
Sbjct: 342 YIKEYEVERMMRDAKITEIYEGTSEVMLMVVSGAL 376


>gi|114766433|ref|ZP_01445402.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541374|gb|EAU44422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601]
          Length = 593

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 157/394 (39%), Gaps = 72/394 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 148 YLPKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTKAEPQEDGTYKITGSKI 194

Query: 234 FLSSPMSDAF-----IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           ++S+   D       ++LA++ G       +  F+VP+ + +     G  N +    L++
Sbjct: 195 WISAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFMVNADGSRGDRNAVSCGGLEH 254

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + +    GFL+G+ +     +  M     L   +   +   V+   A+ 
Sbjct: 255 KMGIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGYAQGAVAYQNALG 314

Query: 338 YARR----RHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +A+     R V+G          ++  P ++R + D       A A  F  A+  D+A  
Sbjct: 315 FAKDRLQGRDVTGAKNPEGPADSIMVHPDVRRNLMDQKALTEGARAFVFWGASLIDQAHR 374

Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++ A   I  + P+ K +           A + +GGSG+  E  + +  R++    I 
Sbjct: 375 SGDKDAEGLISLLTPVIKGFLTDKGFETAVLAQQTLGGSGFTREWGLEQFVRDARITMIY 434

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--- 500
            G+     LD++                L QD    GK V+           E KG    
Sbjct: 435 EGTNGIQSLDLVG-------------RKLAQD---GGKHVMAFFDMVKRFIAEHKGQDEA 478

Query: 501 --ARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
             A+FL     L +++  L +AGM      F++N
Sbjct: 479 FDAQFLE---PLKAASKDLQQAGM-----FFMQN 504


>gi|326403749|ref|YP_004283831.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050611|dbj|BAJ80949.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 386

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 22/247 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++T++ ++  +  Y L+G K +++ +P +  F ++A+  G     +  F
Sbjct: 124 LTEPDAGSDAASLTTRAERDGED-YILNGAKRYITNAPRAGGFTLMARTGGPGASGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKIL 315
           +VP         GL   R   K+G R   T ++   N     +   N+  G P +  +  
Sbjct: 183 IVP-----ADTPGLKLGRPDRKMGQRGTKTCDVILENA---RVPAANIIGGVPGQGFRTA 234

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++ +   +A     EAI YAR R   G  + +  +++  +AD   +++A 
Sbjct: 235 MKVLDRGRLHIAAVACGMARRLQDEAIAYARERRQFGRPIGEFQLVQAMLADSEAELSAG 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL   +A ++D+ ++     A   + A   K +C +M   V   A++  GG+GY+ E  
Sbjct: 295 WALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTEMVGRVADRAVQVHGGAGYMAEYK 353

Query: 430 IARHYRE 436
           + R YR+
Sbjct: 354 VERFYRD 360


>gi|169796349|ref|YP_001714142.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156915|ref|YP_002318960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483810|ref|YP_002326035.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|239503638|ref|ZP_04662948.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|260553748|ref|ZP_05826019.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|332851995|ref|ZP_08433862.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332871726|ref|ZP_08440186.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|169149276|emb|CAM87159.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056075|gb|ACJ40977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988607|gb|ACJ58906.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|260405148|gb|EEW98647.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|322508023|gb|ADX03477.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517609|gb|ADX91990.1| acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729572|gb|EGJ60910.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332731294|gb|EGJ62591.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 384

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|145588701|ref|YP_001155298.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047107|gb|ABP33734.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 595

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 155/336 (46%), Gaps = 60/336 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +P + + + P + S E+  +             + LTE + G+
Sbjct: 126 LCPMLTDGAIEALLTAASPELLERFVPNMISGEWTGS-------------MCLTEPQAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++ + ++     +G Y + G K +++    D       ++LA+     EG  G   F+V
Sbjct: 173 DLSMVRARAVPEGNGAYKIFGTKIYITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G  N +    +++K+G +++ T  L+F +     G+L+G+ N     +E
Sbjct: 233 PKFLVNADGSLGDRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRG---LE 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKR 357
            M   + +++A  +V    +++AE     A+ YA+ R  S  +        +I QP +KR
Sbjct: 290 YM--FVMMNAARFAVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKR 347

Query: 358 AIADI-------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            +  +             A A         DEA  ++ +A Y   + PI K +  +M+  
Sbjct: 348 MLMTMRAYTEASRALAYYAAAAYDAQHADPDEAVKKANQAIY-EFLVPIVKGFSTEMSIE 406

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V +  ++  GG G+IEE   A+HYR++   +I  G+
Sbjct: 407 VASLGVQVHGGMGFIEETGAAQHYRDARILTIYEGT 442


>gi|77456345|ref|YP_345850.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77380348|gb|ABA71861.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 393

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  A+ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKV-DGGYSLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                +  D+    GP         L+SA   +S   +  AE     A  Y   R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  +ARH
Sbjct: 336 SLEIARMARDMLGGNGISDEFGVARH 361


>gi|332876399|ref|ZP_08444168.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|332735409|gb|EGJ66467.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 384

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|302561497|ref|ZP_07313839.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479115|gb|EFL42208.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 384

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 44/302 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   +    + W P + S  Y              +G  GLTE   G+D   +T++
Sbjct: 95  AKTVAAWGSEEQKRAWLPGLTSGGY--------------VGCFGLTEPGTGSDAGNLTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +   G Y ++G K F+++   +D  ++ A+     G   V   L      GL  + L 
Sbjct: 141 AVRDGGGGYVVNGTKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPADTPGLTRRALH 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329
            K+G R  AT EL        +L D+ V      GP E     + + +     MSV+   
Sbjct: 201 GKLGLRGQATAEL--------VLEDVRVPASAMLGP-EGKGFSVAMSALAKGRMSVAAGC 251

Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D  +
Sbjct: 252 VGIAQAALDAAVRYAGEREQFGKAIARHQLVQELISDIAVDVDAARLLTWRVADLVDRGR 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E++ A++ A        + A      A++  GG GYI+E    +  R++   ++  
Sbjct: 312 PFAVESSKAKLFA-------SEAAVRAANSALQVFGGYGYIDEYPAGKLLRDARVMTLYE 364

Query: 445 GS 446
           G+
Sbjct: 365 GT 366


>gi|126642910|ref|YP_001085894.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 562

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 128 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 187

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 188 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 247

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 248 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 307

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 308 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 367

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 368 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 415


>gi|111334|pir||B30605 acyl-CoA dehydrogenase (EC 1.3.99.3) precursor,
           short-chain-specific - rat
          Length = 412

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R+++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|146280837|ref|YP_001170990.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145569042|gb|ABP78148.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 393

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 44/275 (16%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
             + + PK+ S EY              IG  GLTE   G+D  ++ ++ +K+ DG Y L
Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164

Query: 229 SGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SG K W  +SP++D F++ A+ + G +  F++ +  E     GL    +  K+G R++ T
Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDAGEIRGFVLEKGWE-----GLSAPTIHGKVGLRASIT 219

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+   N F        D+    GP         L+SA   +S   +  AE     A  Y
Sbjct: 220 GEIVMDNVFCPEENAFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +  E       +  
Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + K   C  A  V   A + +GG+G  +E  +ARH
Sbjct: 327 LMKRNSCGKALDVARMARDMMGGNGISDEFGVARH 361


>gi|116327038|ref|YP_796758.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332303|ref|YP_802021.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119782|gb|ABJ77825.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125992|gb|ABJ77263.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 387

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 20/283 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +        +TE   G+D+AAI +  +K+ D  Y ++G K W  ++  +D   +LA+
Sbjct: 112 PMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDE-YIINGSKMWITNAGYADWLFVLAK 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301
            +   G   +   + D    G+   + +  +G + + T  + F +         G     
Sbjct: 171 TDPSAGHKGITGFIVDAKSPGIIVGKKEINMGQKCSDTRAITFEDVKVPSWQMIGREGEG 230

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++ G  +  +  +    AI +V   R ++  +++YA  R   G  ++D   +   IA+
Sbjct: 231 FKIAMGAFDRTRPGV----AIGAVGVARAAMEHSVNYANTRSTFGRPIMDNQGISFMIAE 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A DI A   L ++ A   D     + +A+       I K +C  M   V  +A++ +GG
Sbjct: 287 MARDIEAGRLLCYQAAWIIDNGFRNTYQAS-------IAKMFCADMCMKVCTDAVQVLGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            G+  E  + +  R++    I  G+     + V   L  G  +
Sbjct: 340 YGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 382


>gi|260555418|ref|ZP_05827639.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411960|gb|EEX05257.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 384

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|265765878|ref|ZP_06093919.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16]
 gi|263253546|gb|EEZ25011.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16]
          Length = 567

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      D  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G + + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   ++ +   + A+ 
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L +  A   D  K+              R+E+  +A++     P+ K    + A     
Sbjct: 347 SLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  +  G  L
Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457


>gi|262371684|ref|ZP_06064963.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
 gi|262311709|gb|EEY92794.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
          Length = 593

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 101/482 (20%), Positives = 195/482 (40%), Gaps = 60/482 (12%)

Query: 71  QELARMANYNTPQLHAYG-PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIW-DRSFEPV 127
           +E+A+ A   T  L+  G   G RW+  E F PA      R   +G    +  D  +   
Sbjct: 44  EEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKDAFRQYAEGGWIGLGADEEWGGQ 103

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP 185
              +   + A  +          L+ P ++  + +AL +  +    + + PKI+S E+  
Sbjct: 104 AMPKMLTVLADEMLFATN--PSFLLYPLLSVGAGMALNSYASQEQKETYLPKIYSGEWSG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE   GTD+  I ++ ++  DG Y ++G K F++    D    
Sbjct: 162 T-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKIFITGGDHDLAEN 208

Query: 242 -AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVEL 289
              ++LA+          +  F+VP+ L  EDGS    N +    +++K+G +++AT  +
Sbjct: 209 IIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGAGSIEHKMGIKASATCVM 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVS 345
            F    GFL+G  N     +  M     L   I  +     +   A  YA    + R  S
Sbjct: 269 NFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQYATDRLQGRSAS 328

Query: 346 G---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
           G          IL+   V +R + ++  +  A+ A +  +    D  K  ++  A  +  
Sbjct: 329 GVQSPSKPADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITKFSTDAEAVKKAN 387

Query: 395 ----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K +    A     +A    GG G+I E  + +  R+     I  G+    
Sbjct: 388 DRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGFIREWGMEQCIRDLRIAQIYEGTNGVQ 447

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKEDKGLARFLTEK 507
             D++   +++ G     +  + + +D  ++    +  ++D ++    E + + +F+ E+
Sbjct: 448 SQDLIGRKVIKNGGAFIAEYIAEI-RDFANTLDADLNFIKDATLDAATEVEAVTQFIIEQ 506

Query: 508 IA 509
            A
Sbjct: 507 AA 508


>gi|213586532|ref|ZP_03368358.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 119

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V FHPAWH L++    + +H   W+       R  +   RAAR  L AQ+EAG L   ++
Sbjct: 7   VRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLHAQVEAGTLCPVTM 62

Query: 157 T-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           T +A+ + L   P    DW   + S  YD       QK  + IG+G+TEKRG  D+
Sbjct: 63  TFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGMTEKRGRIDV 118


>gi|75061870|sp|Q5RAS0|ACADS_PONAB RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|55728802|emb|CAH91140.1| hypothetical protein [Pongo abelii]
          Length = 412

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|186477187|ref|YP_001858657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184193646|gb|ACC71611.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 396

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 18/240 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +SP++D F++ AQ+E      + 
Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGAKMWITNSPIADVFVVWAQLETDGKDEIR 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             +LE G   GL    +  K+G R++ T E+     F   + + N+  G          L
Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPEENLMPGVKGLRGPFTCL 251

Query: 319 DSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +SA   ++   +  AE+  H AR+    R   G  L    ++++ +AD+  +I       
Sbjct: 252 NSARYGIAWGALGAAESCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  +ARH
Sbjct: 312 LRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVARH 364


>gi|53714660|ref|YP_100652.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46]
 gi|60682673|ref|YP_212817.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343]
 gi|253565164|ref|ZP_04842620.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5]
 gi|52217525|dbj|BAD50118.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46]
 gi|60494107|emb|CAH08899.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343]
 gi|251946629|gb|EES87006.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5]
 gi|301164151|emb|CBW23707.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 638R]
          Length = 567

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      D  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G + + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   ++ +   + A+ 
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L +  A   D  K+              R+E+  +A++     P+ K    + A     
Sbjct: 347 SLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  +  G  L
Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457


>gi|294341456|emb|CAZ89873.1| Short-chain specific acyl-CoA dehydrogenase (SCAD) (Butyryl-CoA
           dehydrogenase) [Thiomonas sp. 3As]
          Length = 375

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLA 247
           P+ +        LTE + G+D + + +  +   D  Y L G K F++S  +   A +M A
Sbjct: 111 PVARGEWIGAFALTEPQAGSDASNLRTTARLEGDH-YVLDGVKQFITSGKNGQVAIVMAA 169

Query: 248 --QVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
             +  G+ G   FLVP     G+P G   +RL++K G  ++ T ++ F       +N  G
Sbjct: 170 TNRAAGKKGISAFLVP----TGTP-GYIVERLEDKAGQSASDTAQIRFEGCRVPAANRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YAR R   G  + +   ++
Sbjct: 225 AEGEGYKIALSGLEGGRIGI----AAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A+ I AA  L +  A+  D      +EAA A++MA        +MA  V + A+
Sbjct: 281 FRLAEMAMQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMA-------SEMAERVCSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R +R+     I  G+ +
Sbjct: 334 QIHGGYGYVADFPVERIWRDVRVCQIYEGTSD 365


>gi|224825342|ref|ZP_03698447.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602263|gb|EEG08441.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 386

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 167/407 (41%), Gaps = 55/407 (13%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           +A+E AR         H   P    WD+ E  P     LRR+   G  C +    + P  
Sbjct: 15  SAREFAR---------HELAPYAAHWDEEEVFP--KDTLRRAGEMGF-CGL----YTPQQ 58

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPT 186
                  R     +  +L AG          S  A +T   +H    W    F+R     
Sbjct: 59  YGGLGLTRLDAAIVFEELAAG--------CTSTAAYLT---IHNMVSWMIGSFARAEVAE 107

Query: 187 NKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
              P   +   +G   LTE   G+D A + ++ ++  D +Y L+G K F+S   S D  +
Sbjct: 108 QWGPALASGAKLGSYCLTEPGAGSDAANLRTRAERDGD-VYRLNGSKAFISGAGSTDVLV 166

Query: 245 MLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
           ++A+  G     +  F+VP  L      G+ Y + + K+G  S  T  + F N       
Sbjct: 167 VMARTGGTGAKGISAFVVPADLP-----GISYGKKERKMGWNSQPTRTITFDNVAVPSAN 221

Query: 298 LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           LLG+     G    MK L    ++ A  SV   + +L  A  Y + R   G  L +   +
Sbjct: 222 LLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQAALEAAARYVQERQQFGQALAEFQTV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD++ ++ AA  +    A   D   S S +A     MA   K +       V+ EA
Sbjct: 280 QFRLADMSTELVAARQMVRLAAWKLD---SGSPDATAYCAMA---KRFVTDAGFKVVNEA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461
           ++  GG GYI+E  + RH R+S  + IL G+   M V+    LL+ G
Sbjct: 334 LQLFGGYGYIKEYPLERHLRDSRVHQILEGTNEIMRVIVARRLLQDG 380


>gi|254502174|ref|ZP_05114325.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222438245|gb|EEE44924.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 379

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 30/264 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCF 256
           LTE   G+D AA+ +  +   D  Y L+G K F+S   +SD + ++ +      G + C 
Sbjct: 124 LTEPGSGSDAAALRTTAKDDGDH-YILNGSKAFISGGGVSDLYAVMVRTGDEGPGGISCL 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LV    E G+P GL +   + K+G +S  T ++ F       SN  G       ++   +
Sbjct: 183 LV----EKGTP-GLSFGANEVKMGWKSQPTAQVNFQDCRVPKSNLIGVEGQGFKIAMAAL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I       S+   +  L +AI Y R R   G  L     ++  +AD+A ++ AA
Sbjct: 238 DGGRLNI----GACSIGPAQECLDQAIAYMRERKQFGKPLTAFQALQFRLADMATELEAA 293

Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L ++ A   D     + + AA A+ +A  T +        V+ +A++  GG GY+ + 
Sbjct: 294 RLLLYKAATEVDAKTPDAPKFAAMAKRLATDTGF-------KVVNDALQLHGGYGYLRDY 346

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            I R  R+   + IL G+   M L
Sbjct: 347 PIERFLRDVRVHQILEGTNEVMRL 370


>gi|91793117|ref|YP_562768.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91715119|gb|ABE55045.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
          Length = 583

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 28/292 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           + +TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G
Sbjct: 164 MDMTEPQAGSDLRNIRTKAVPQEDGSYQITGSKIFITGGDQDLTENVIHLVLAKLPDSNG 223

Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              FLVP++  +     G  NG+    +++K+G +++AT  + F +  GFL+G+ N    
Sbjct: 224 ISLFLVPKIAVNADGSLGEANGVTVGSIEHKMGLKASATCVMNFDSARGFLIGEANRGLA 283

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVMKR 357
            +  M     L   I  +   + +   A  YA  R + G            +I    ++R
Sbjct: 284 CMFTMMNYERLAIGIQGLGSAQAAYQMARDYANER-IQGTAADATEKRNDPIIVHGDVRR 342

Query: 358 AIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVI 412
            +  +     A  AL+       D AK      + + A Y  ++ P+ K +         
Sbjct: 343 MLLTVNAMTQAGRALAVMTGKQLDLAKYATGDIQQKAAKYVGLLTPVAKAFLTDRGLDAT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             + +  GG GYI E  I +  R++    I  G+     LD +     G +L
Sbjct: 403 IMSQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQALDFIGRKVTGDDL 454


>gi|307320510|ref|ZP_07599925.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893786|gb|EFN24557.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 593

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 185/448 (41%), Gaps = 76/448 (16%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDG 114
           LGE ++     E  R A+     L   G  G+R         V+    W  L R  I  G
Sbjct: 31  LGEDLVDAILGEAGRFASEEVAPL---GDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172
            +      +F    +   H +  A + +         ++P++T  ++ AL    T  +  
Sbjct: 88  WNGLTAPEAFGG--QNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKA 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K
Sbjct: 146 TFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQK 192

Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRL 275
            F++      +D  + L         A  +G +  FLVP+ L  EDGS    N +    L
Sbjct: 193 IFITWGEHDFTDNIVHLVLARLPDAPAGTKG-ISLFLVPKFLVNEDGSLGERNDVFCHSL 251

Query: 276 KNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           ++K+G   + T  + + +          G+L+G+ N     +  M     +++A ++V  
Sbjct: 252 EHKLGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTM-----MNNARLAVGM 306

Query: 328 MRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALS 373
             V++AEA     I YA+ R        SG G+  +I+ P + R +  +      + A+ 
Sbjct: 307 QGVAIAEAATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIV 366

Query: 374 FRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  A++ D A +   E A      + ++ PI K +       V +  ++  GG G+IEE 
Sbjct: 367 YACAHAVDMAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEET 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
             AR+ R++    I  G+     +D++ 
Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVT 454


>gi|312141407|ref|YP_004008743.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325673172|ref|ZP_08152865.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890746|emb|CBH50065.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325556007|gb|EGD25676.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 611

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 135/323 (41%), Gaps = 66/323 (20%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA  +  R +  T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 146 QKQWAATLVERGWGAT-------------MVLTEPDAGSDVGAGRTKAVQQDDGTWHIEG 192

Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRLLED------GSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+   D      G  NG+  
Sbjct: 193 VKRFITSATSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFHFDFEKNELGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G +++AT EL F        G+L+G+++     + D+     +     ++S +
Sbjct: 253 TNVEHKMGLKASATCELTFGGHGTPAVGWLVGEVHNGIAQMFDVIEHARMMVGTKAISTL 312

Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375
                 A+ YA++R V G  L                P ++R++A     +  A A   R
Sbjct: 313 STGYLNALDYAKQR-VQGSDLTQMTDKTAPRVTITHHPDVRRSLA-----LQKAYAEGMR 366

Query: 376 LANSFDEAKSRSEEAAYAR------------IMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               +  A    E A                ++ PI K    + A   + E+++ +GGSG
Sbjct: 367 AVYLYTAAHQEPEMAQLVSGADEQLAHRVNDLLLPIVKGVGSERAYQYLTESLQTLGGSG 426

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++++  I ++ R+S  +S+  G+
Sbjct: 427 FLQDYPIEQYIRDSKIDSLYEGT 449


>gi|15806336|ref|NP_295042.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459067|gb|AAF10888.1|AE001978_8 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 398

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 20/266 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
            P+ +        L+E   G+D A + +      D  + ++G K W  +  +++  ++ A
Sbjct: 131 GPLTEKPGLAAFALSEPNNGSDAAGMHTTAYLDGDE-WVINGTKMWISNGGIAEVTVVFA 189

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300
             + + G      L+      G  Y ++K+K+G R++ T EL F N         G L  
Sbjct: 190 TTDKQGGHRATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPKENQLGGLGD 249

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++   ++  +I +    A  SV   R +L E++ YA++R   G  +     ++  +A
Sbjct: 250 GFKIAMKTLDKTRIPV----AAGSVGLARRALEESVKYAKQRERFGTPISQFQAIQFKLA 305

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ +     +  + A   D+  +   E+A       I K +C +MA     EA++  G
Sbjct: 306 DMAIGVETGRLMYQKAAWLVDQGHTHGAESA-------IAKAYCSEMAFNAANEAIQIHG 358

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ E  + +  R+   N I  G+
Sbjct: 359 GYGYVGEYPVEKLLRDVKLNMIYEGT 384


>gi|330938535|gb|EGH42120.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 592

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 37/305 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYA------------RRRHVSGGILIDQ 352
              +  M     L   I  + SG+R S   A+ YA            + +  +   +I  
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +        A S  +A   D AK   ++ A  R      ++ P++K +   
Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465
           +         +  GG GYI E    +  R+     I  G+     LD++     G+N   
Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAL 464

Query: 466 EQLFS 470
            QLFS
Sbjct: 465 YQLFS 469


>gi|299770620|ref|YP_003732646.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700708|gb|ADI91273.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 384

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|242215320|ref|XP_002473476.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727377|gb|EED81297.1| predicted protein [Postia placenta Mad-698-R]
          Length = 424

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 27/278 (9%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           ++H+ W       +Y P   A  +  S+A    ++E   G+D+ ++  + +K+ DG Y L
Sbjct: 135 QIHR-WGTDAQKEKYLPDLIAGKKVGSLA----MSEPGSGSDVISMKLRAEKV-DGGYKL 188

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G+K W  + P +   ++ A+     G   +   ++E G      +Q+L +K+G R + T
Sbjct: 189 NGNKFWITNGPTASTLVVYAKTSPDKGSRGITAFIIESGFAGFSTHQKL-DKLGMRGSDT 247

Query: 287 VELEFSNTFGFLLGDLNVSTGPVED-MKILIY-LDSAIMSVSG-----MRVSLAEAIHYA 339
            EL F + F   + + +V  GPV+   K+L+  LD   + +SG     M+ +   A+ Y 
Sbjct: 248 CELVFEDCF---VPEESV-LGPVDGGAKVLMSGLDLERLVLSGGPLGLMQAAFDYAVEYV 303

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    +M+  IAD+   + A+ +  + +A + D  K    + A A +    
Sbjct: 304 HERKQFGQPVGTFQLMQAKIADMYTKLNASRSYVYAVAKACDAGKVSRRDCAGAIL---- 359

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              +    A  V  +AM+C+GG+GY  E    R  R++
Sbjct: 360 ---YSSDRAVEVTIDAMQCLGGNGYTNEYPTGRFLRDA 394


>gi|222055284|ref|YP_002537646.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564573|gb|ACM20545.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 380

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           LG TE   G+D+  + ++ ++  D  Y ++G K F+++  ++D  ++ A  +   G   +
Sbjct: 122 LGATEPNAGSDLLNMKTRAERKGDK-YVINGQKCFITNGSVADITVVYAYTDPSKGAKGI 180

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E G+P GL Y R + K+G R +   EL F N       L+G+    TG    M+ 
Sbjct: 181 SAFVVERGTP-GLIYGRDEVKMGMRGSINSELFFENMEIPAENLIGE--EGTGFANLMQT 237

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +  A  +V   + +L  A+++AR R   G  +     ++  IAD+A  + A+  L
Sbjct: 238 LSVNRIFCAAQAVGIAQGALEIAMNHARERVQFGNTIAHLTPIQFMIADMATAVEASRLL 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + + A   DE   +      A +   + K +    A  V  +A++ +GGSGY++E ++ R
Sbjct: 298 TRKAAQLVDEHDKK------AVVFGGMAKTFASDTAMQVTTDAVQVLGGSGYMKENNVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKLTQIYTGT 365


>gi|52842158|ref|YP_095957.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52629269|gb|AAU28010.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 375

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 38/282 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P+I S E                 L LTE   G+D+  + +Q     D  + L+G K 
Sbjct: 108 WLPRIASGE-------------TLAALALTEPNIGSDLEHVETQLLDAGDE-FILNGSKK 153

Query: 234 FLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +++   ++D F++LA  +G+    LV    E G+P GL    + N +G RSN   E+ F 
Sbjct: 154 YITLGQIADLFLVLANCQGQPTAVLV----EKGTP-GLIISPMSNFLGLRSNMLAEIFFD 208

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
           N       LLG + V    V    I   LD    + +   V L +A     + Y + R  
Sbjct: 209 NCRIPKTNLLGSIGVGFTYV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQERKQ 264

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L +  ++++ I ++ + + AA  L F       E + +   A  A  +  I KY  
Sbjct: 265 FNRRLDEHQLIQKMITEMVVQVKAARELCFYAG----ELRQKKNPAYIAETL--IAKYAA 318

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            KM   V   A++  G +G+ E   + R+YR++    I+ G+
Sbjct: 319 SKMVVFVSNHALQLFGAAGFDETYPVERYYRDAKVMEIIEGT 360


>gi|194899891|ref|XP_001979491.1| Arc42 [Drosophila erecta]
 gi|190651194|gb|EDV48449.1| Arc42 [Drosophila erecta]
          Length = 405

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIAIDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+     +  G    + ++K+G R ++T +L F +    ++   N+   P    K
Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L + 
Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D+ +  ++EAA A++ A      C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368

Query: 428 RSIARHYRESPANSILLGS 446
            +  RHYR++    I  G+
Sbjct: 369 MAAERHYRDARITEIYEGT 387


>gi|91790028|ref|YP_550980.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666]
 gi|91699253|gb|ABE46082.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666]
          Length = 393

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +  + G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 129 LAMSEPGAGSDVISMKLKAED-NGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL FSN       +LG LN  +G    M  L
Sbjct: 188 TAFLIEKGMKGFSVAQKLDKLGMRGSHTGELVFSNVEVPAQNILGGLN--SGAKVLMSGL 245

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 246 DY-ERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSF 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++ +A + D     +E A   R        WC + A  +  E ++  GG+GYI +  + R
Sbjct: 305 AYTVAKNLD--MRGAEHARQVRKDCASVILWCAEKATWMAGEGVQIFGGNGYINDYPLGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|332975850|gb|EGK12728.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 380

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 37/274 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K       GLTE   G+D     +   +  D  + ++G K F+++      + L  V
Sbjct: 113 PLCKGESLGAFGLTEPNAGSDAGGTRTTAIREGDD-WVINGSKCFITNASFAKHLALTAV 171

Query: 250 EGRVGCFLVPRLLEDGSP---------NGLCYQRLKN--KIGNRSNATVELEFSNTFGFL 298
            GR          EDGSP         +   ++ + N  K+G  S+ T EL   N     
Sbjct: 172 TGRK---------EDGSPEISAVIVPTDAKGFRVIDNYVKMGLHSSNTTELVMENV---R 219

Query: 299 LGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           +   N+     E  K  LI LD   + +  M V +A+     A+ YA+ R   G  +   
Sbjct: 220 VPHENILGRIGEGFKQFLITLDGGRIGIGAMAVGIAQGAYEAALQYAKERQQFGRPISKF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            V++  +AD+A++I  A  + ++ A   D+ +  S+EAA A++ A        ++A  V 
Sbjct: 280 QVIQHKLADMAMNIELARNMVYKAAWLKDQGRKFSKEAAMAKLFA-------SEVAMGVC 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A++  GG GY+ E  + R +R++    I  G+
Sbjct: 333 DQAVQIHGGYGYMHEYRVERFFRDAKLTEIGEGT 366


>gi|281425458|ref|ZP_06256371.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302]
 gi|281400451|gb|EFB31282.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302]
          Length = 576

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 23/307 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  E       P       + + LTE   G+D+  +  +    +DG + L+G K F+++ 
Sbjct: 152 FGTEEQRKKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATLDADGTWRLNGVKRFITNG 211

Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            SD  ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    
Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271

Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           L GD  +  G ++ +  L+    L  A  SV   + +  EA+ YA+ R   G  +I  P 
Sbjct: 272 LCGDRKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397
           +   ++ +   + A  ++ +  A   D  K+              R E   Y R+     
Sbjct: 330 VYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKEMKQYNRLADAFT 389

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K    + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  
Sbjct: 390 PIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRY 449

Query: 458 LEKGTNL 464
           +  GT L
Sbjct: 450 ITNGTYL 456


>gi|212640554|ref|YP_002317074.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212562034|gb|ACJ35089.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 379

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 28/272 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           GL+E   G+D++A+ ++  +  D  Y L+G K W  +   +D +++ A  +       + 
Sbjct: 124 GLSEPGAGSDVSAMKTRAVRDGDH-YVLNGSKVWITNGGEADIYVVFAVTDPEKKHRGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G    + + K+G RS+ T EL F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGEEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVEYAKGRVQFGKPIAEQQGIAFKLADMATAIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A          +E+A A++ A  T       A  V  EA++  GG GY ++ 
Sbjct: 295 ARLLTYQAAWLESNGLPYGKESAMAKLFAGDT-------AMKVTVEAVQIFGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     + +  +L K
Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRIVISRMLTK 379


>gi|169826437|ref|YP_001696595.1| long-chain specific acyl-CoA dehydrogenase [Lysinibacillus
           sphaericus C3-41]
 gi|168990925|gb|ACA38465.1| Long-chain specific acyl-CoA dehydrogenase [Lysinibacillus
           sphaericus C3-41]
          Length = 382

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 41/290 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W PK  S  Y                + +TE   G+D+A I  Q   I DG  Y ++G K
Sbjct: 111 WLPKCISGHY-------------ITAIAMTEPGTGSDLANI--QTTAIRDGDHYIVNGQK 155

Query: 233 WFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F+++ +    +++A        +   G  L+  ++EDG+P G    R   K+G  +  T
Sbjct: 156 TFITNGIHTNLVVVAVKTNPSAEKKHQGISLL--VIEDGTP-GFTKGRKLEKVGMHAQDT 212

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
            EL F +       LLG+     G V  M+ L    L  AI + + +   LA  + Y + 
Sbjct: 213 AELFFEDCRVPAHNLLGE--EGKGFVYMMEKLQQERLAVAIAAQTAIEDMLALTLDYVKS 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APIT 400
           R   G  + D    +  IA++A  +         L  SF E       A    +    + 
Sbjct: 271 RQAFGKSIGDFQNTQFKIAEMATKM--------ELGKSFLETLIEEHLAGKDVVTKVSMA 322

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           KYW  + A  +  + M+  GG GY+EE  IAR YR+ P  SI  G+   M
Sbjct: 323 KYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372


>gi|307295365|ref|ZP_07575204.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878868|gb|EFN10087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 600

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 48/348 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE   GTD+  I ++    +DG Y ++G K F+S+   D       ++LA+     E
Sbjct: 163 MNLTEPHCGTDLGLIKTRAVPQADGSYIITGTKIFISAGEHDLTENIIHLVLAKTPDAPE 222

Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP+ L   DGSP   N L    L++K+G   NAT  + +    G+L+G+ N
Sbjct: 223 GSKGISLFVVPKFLLNVDGSPGERNALSCGSLEHKMGIHGNATCVMNYDGATGWLVGEEN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQ------- 352
                +  M     L   +  +    ++   A  YA  R     ++G   +D+       
Sbjct: 283 KGLAAMFIMMNAARLGVGLQGLGQAEIAYQNAALYAHERRQGRALTGPKDLDEKADTLFV 342

Query: 353 -PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P ++R      A+ +    +    AL   LA+     + R       +++ P+ K +  
Sbjct: 343 HPDVRRMLMEAKALTEGLRALMLWGALQVDLAHHAATEEERQAADDLLQLLTPVIKGYGT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                V   A +  GG GYI E  + +  R++    I  G+     +D++          
Sbjct: 403 DKGFDVAVTAQQVFGGHGYIWENGVEQFVRDARIAQIYEGTNGIQAMDLVG--------- 453

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
                 L  + G + +  + I+ D ++  K D+ LA  L E +  AS 
Sbjct: 454 ----RKLAMNGGRALQSFLKIVADEVADAKGDEKLAP-LAEALEKASG 496


>gi|229587692|ref|YP_002869811.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|312958214|ref|ZP_07772737.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|229359558|emb|CAY46399.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|311287645|gb|EFQ66203.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 393

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  A+ ++ +K+  G Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKVEGG-YSLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++  + + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWGKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                +  D+    GP         L+SA   +S   +  AE     A  Y   RH  G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRHQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  +ARH
Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361


>gi|50084774|ref|YP_046284.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           sp. ADP1]
 gi|49530750|emb|CAG68462.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           sp. ADP1]
          Length = 375

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE + GTD + + ++  K  D  Y ++G K F++S   +D  I+ A 
Sbjct: 111 PLAQGQMLGAFALTEPQAGTDASNLKTKAIKDGDD-YIITGSKQFITSAQHADVVIVFAV 169

Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                G+ G   FLVP         G    RL+ K+G  ++ T +++      +  +LLG
Sbjct: 170 TNPDAGKKGISAFLVPT-----DTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLG 224

Query: 301 DLNVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           +        E     I LD+        A  SV   + +L  AI YA+ R   G  +I+ 
Sbjct: 225 E--------EGQGYKIALDNLAGGRIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEH 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A  +A A  + +  A+  +  ++   EA+ A++ A        +MA  V 
Sbjct: 277 QAVGFRLADMATQVAVARQMVWHAASLRESNQASLVEASMAKLFA-------SEMAEKVC 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + A++ +GG GY+++  + + YR+     I  G+ +
Sbjct: 330 SGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSD 365


>gi|220916367|ref|YP_002491671.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954221|gb|ACL64605.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 385

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 13/266 (4%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247
           AP  +      L ++E   G+D+AAI +  ++  DG    ++G K ++++     F+ LA
Sbjct: 119 APAVRGERVAALAISEPDAGSDVAAIRTTARR--DGADLVVNGSKMWITNGARADFLTLA 176

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
              G  G   +  LL      G    R   K+G  S+ T  L F +       LLG+ + 
Sbjct: 177 VRTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQ 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V        L +A+ +V+GM++ L +A+ Y   R   G  +      +  +AD   
Sbjct: 237 GFYHVMANFQGERLVAAVQAVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L++R A+     +    E + A++ A       C++A  V  + M+  GG GY
Sbjct: 297 AVEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGY 349

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  IAR +R+  A +I  G+   M
Sbjct: 350 VLESDIARAWRDVRAMTIAGGTSEIM 375


>gi|325283339|ref|YP_004255880.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315148|gb|ADY26263.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 380

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 22/267 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           +P+ +        L+E   G+D A + +    + DG  + ++G K W  +   ++  ++ 
Sbjct: 112 SPLVEKPALAAFALSEPNNGSDAAGMHTTA--VLDGDEWVINGTKMWISNGGEAEVTVVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299
           A  E   G      L+      G  Y ++K+K+G R++ T EL F N         G L 
Sbjct: 170 ATTERGAGHKATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLG 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++   ++  +I +    A  SV   R +L E++ Y++ R   G  +     ++  +
Sbjct: 230 DGFKIAMKTLDKTRIPV----AAGSVGVARRALDESVKYSKEREAFGKPISSFQALQFKM 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ I     +  + A   D+      E+A       I K +C  MA     EA++  
Sbjct: 286 ADMAMGIETGRLMYLKAAWLVDQGLPHGYESA-------IAKAYCSDMAFDAANEAIQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+ E  + +  R+   N I  G+
Sbjct: 339 GGYGYVGEYPVEKLLRDVKLNQIYEGT 365


>gi|213971499|ref|ZP_03399611.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301385793|ref|ZP_07234211.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302062906|ref|ZP_07254447.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302133683|ref|ZP_07259673.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213923781|gb|EEB57364.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 600

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG       A+ YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G N  +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGNALKQLL 469


>gi|170721232|ref|YP_001748920.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169759235|gb|ACA72551.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 582

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 42/308 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE----GR 252
           LTE + G+D+A +  + + + DG Y ++G+K F+S    D       ++LA++     G 
Sbjct: 164 LTEPQAGSDLALLRCRAEPLGDGSYAVTGNKLFISGGDHDLTRDILHLVLARLPDAPAGS 223

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G    LVP  LE G  NG+    L++K+G R +AT  L F    G+L+G  +       
Sbjct: 224 RGLSLLLVPNGLEGGVGNGVQCDGLEHKLGIRGSATCALRFEGGKGWLVGQAHGGLA--- 280

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-----HYA-RRRHV--------SGGILID----Q 352
              + + ++SA + V    +  AEA       YA  RR +        +G    D     
Sbjct: 281 --AMFVMMNSARLHVGLQGLGHAEAAWQLARDYALERRQMRAPGHSPSAGDAAADPIHLH 338

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCK 406
           P M+  + ++ +       L +  A+  D A +      R++ +  A ++ PI K     
Sbjct: 339 PAMRLTLLELRVRTEGMRTLGYWTAHWLDVAGASTDPALRAKASTLAALLTPIIKAAFTD 398

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
              ++ ++A++  GG GY  E  I +  R+S    I  G+      D+L   +L  G   
Sbjct: 399 YGFSLSSKALQVFGGYGYTCEFPIEQVLRDSRIAMIYEGTNEIQANDLLLRKVLGDGGEG 458

Query: 465 FEQLFSTL 472
           F  L   L
Sbjct: 459 FALLLGEL 466


>gi|257452534|ref|ZP_05617833.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           3_1_5R]
 gi|317059075|ref|ZP_07923560.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684751|gb|EFS21586.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R]
          Length = 637

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301
               +G   +   + +    G  +    +K+G RS++T +L F+N         G     
Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            N++   ++  +I I    A  ++   + +  EA++YA+ R   G  +  Q  +   +AD
Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L +  A    E K   E       MA   K +   +A  ++ +A++  GG
Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365


>gi|229178697|ref|ZP_04306061.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228604855|gb|EEK62312.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 569

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 27/292 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+ +  +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTDKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478
             + R YR++  + I  G+     L V  +L K     EQL  T +E D+ +
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|310827112|ref|YP_003959469.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612]
 gi|308738846|gb|ADO36506.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612]
          Length = 641

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +      D  Y L+G+K F++ +P +D +++ A 
Sbjct: 114 PLCKGEKIGAFGLTEPNAGSDAGGTETTAIDKGDH-YLLNGNKIFITNAPKADTYVIFAV 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 173 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELVFNDV---KVPKENLLGEE 229

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A     EA+ YA+ R   G  +  Q  +   IAD+
Sbjct: 230 GQGFKIAMATLDGGRIGIASQALGIAQGAFEEAVAYAKERVQFGKPIGFQQAISFKIADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L ++ A    E K   E       MA   K +   +A  V  +A++  GG+
Sbjct: 290 ATKLHTARLLIYQAA----ELKEYHEPYGMESAMA---KQYASDIALEVTNDALQIFGGT 342

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 343 GYLKGMEVERMYRDAKITTIYEGT 366


>gi|212533453|ref|XP_002146883.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|212533455|ref|XP_002146884.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072247|gb|EEA26336.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072248|gb|EEA26337.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 438

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 27/270 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259
           L+E   G+D  A+ ++ +K +DG Y ++G K W  +S  +  FI+ A ++   G   +  
Sbjct: 179 LSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGFFIVFANIDPSKGYKGITA 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
            ++E G+P G    + + K+G R+++T       VE+  +N  G       ++ G + + 
Sbjct: 238 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKANLLGEEGKGYKIAIGILNEG 296

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +I I        ++G+ +   E A  YA   R   G ++ D   M+  IA    +IAAA 
Sbjct: 297 RIGI-----AAQMTGLALGAWENAAGYAWNDRKQFGQLIGDFQGMQHQIAQAYTEIAAAR 351

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL +  A        R +EA    +M A + K +  ++A  V   A+E +GG G++ E  
Sbjct: 352 ALVYNAA--------RKKEAGQDFVMDAAMAKLYASQVAGRVAGSAVEWMGGMGFVREGI 403

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLE 459
             + +R+S   +I  G+ N  +  +   L+
Sbjct: 404 AEKMFRDSKIGAIYEGTSNIQLTTIAKQLQ 433


>gi|116255587|ref|YP_771420.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260235|emb|CAK03339.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 395

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  ++P++D F++ A
Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWA 185

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + E G +  F    +LE G   GL    +  K+G R++ T E+     F     LL D+ 
Sbjct: 186 KTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVT 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
              GP         L+SA   ++   +  AE     A  Y   R   G  L    ++++ 
Sbjct: 241 GLKGP------FTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKK 294

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A +I+       RL    +E     E       +  I K   C  A  +   A + 
Sbjct: 295 LADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDM 347

Query: 419 IGGSGYIEERSIARH 433
           +GG+G  +E  IARH
Sbjct: 348 LGGNGISDEFGIARH 362


>gi|294862190|dbj|BAJ05798.1| short-chain acyl-CoA dehydrogenase precursor [Homo sapiens]
          Length = 412

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|163940314|ref|YP_001645198.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229011799|ref|ZP_04168980.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229133623|ref|ZP_04262450.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|163862511|gb|ABY43570.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228650023|gb|EEL06031.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228749430|gb|EEL99274.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 381

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q + I DG  Y +SG K W  ++  ++  I+ A
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + R+ R+  A  + +G G + +
Sbjct: 333 NHAVQIHGGYGYMREYEVERYIRD--AKLLEIGEGTSEI 369


>gi|167748723|ref|ZP_02420850.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662]
 gi|167651693|gb|EDR95822.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662]
          Length = 380

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 44/267 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253
            GLTE   G+D     +  ++  D  Y L+G K F  + P++D  A   L + E +   +
Sbjct: 124 FGLTEPNAGSDAGGCVTVAERDGD-EYILNGMKCFNTNGPLADYTAVYALTEPEKKAKGL 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF+V +    G+P G    ++++K+G RS    E+        +L ++ V   P E+M 
Sbjct: 183 SCFVVKK----GTP-GFSVGKVEDKMGIRSAQVSEM--------ILENVRV---PAENMI 226

Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
           +         +  LD   + V+   + +AE     A  Y + R   G  L     +   +
Sbjct: 227 VPSGDGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ ++I AA  + ++ A    E +S S  AA A       KY C + A  V  EA++ +
Sbjct: 287 AELEMEIDAAKLMLYKAATDKQEGRSYSIPAAKA-------KYLCTEAAMHVTTEAVQML 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY++   + R  R++    I  G+
Sbjct: 340 GGNGYMKGYHVERMMRDAKITQIYEGT 366


>gi|27377768|ref|NP_769297.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27350913|dbj|BAC47922.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 592

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 148/330 (44%), Gaps = 49/330 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249
           LTE + G+D+ A+ ++ +K +DG Y + G K F++     M+D  +           A  
Sbjct: 163 LTEPQAGSDVGALRTRAEKQADGTYRIKGTKIFITYGEHDMTDNIVHFVLARLPDAPAGT 222

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
           +G +  FLVP+ + +     G+ N +    +++K+G  ++ T  +   +     GFL+G+
Sbjct: 223 KG-ISLFLVPKFMVNADGSLGARNDIFASGVEHKLGMHASPTCTMTMGDHGGAIGFLIGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352
            N     +  M     L   +  V     +  +A+ YA+ R     +         +   
Sbjct: 282 ENQGMRCMFTMMNQARLGVGLEGVGVADRAYQQALSYAQERKQGRAVGKKGDGSDAIFVH 341

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406
           P +KR +  +    AAA  + +  A + D      + K R++ AA A ++ P+ K +   
Sbjct: 342 PDVKRMLMRMRAQTAAARTICYATAVAIDVSTRARDPKVRADAAARAALLTPMAKGYSTD 401

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------- 456
           +   V    ++  GG G+IEE   A++YR++   +I  G+     +D++           
Sbjct: 402 IGNEVAYLGVQVHGGMGFIEETGAAQYYRDARITAIYEGTNGIQAIDLVTRKLAANGGAA 461

Query: 457 ---LLEKGTNLFEQLFSTLEQDLGSSGKKV 483
              LL++ + + +Q+ ++ +   G++G K+
Sbjct: 462 VWALLDELSAVVKQVEASNDPAFGTTGAKL 491


>gi|332975299|gb|EGK12198.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 601

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 55/341 (16%)

Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P +TSA++  L       + + + P++ + E+  T             + LTE   G+ +
Sbjct: 128 PFLTSAAINVLTHFADDTIKQAFIPRMLTGEFTGT-------------MALTEPHAGSSL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP- 259
           A I +   K  DG Y + G K ++S     +SD  +  +LA+V G       +  F+VP 
Sbjct: 175 ADIRTTAIKQEDGTYRIRGSKIYISGGDHELSDNIVHLVLAKVPGGPAGVKGISLFVVPK 234

Query: 260 -RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
            RL E G     N +    L +K+G R   +  L F +     G+L+G+    L      
Sbjct: 235 YRLDEQGQVVERNDVHLAGLIHKLGYRGTTSTALSFGDKNECVGYLIGEEHFGLRYMFKM 294

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVS----GGILIDQPVMKRAIAD 361
           + + +I +   +A++   G + SLA A    + R   H+S       +I+   +KR +  
Sbjct: 295 MNEARIAVGFGAAMIGYRGYQYSLAYAKDRLQGRVAPHLSPEDDAAPIIEHGDVKRML-- 352

Query: 362 IALDIAAATALSFRL--------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +A        +S  L         N+ D+   + E A    ++ P+ K W  +  P    
Sbjct: 353 LAQKAYGEGGISLCLYGSNLIDRINTCDDETQKQELAELLDLLTPVLKAWPSEYGPKAND 412

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             ++ +GG+GY  E    + +R++  N I  G+     LD+
Sbjct: 413 LGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDL 453


>gi|308173826|ref|YP_003920531.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606690|emb|CBI43061.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553248|gb|AEB23740.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens TA208]
 gi|328911967|gb|AEB63563.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens LL3]
          Length = 380

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
            GLTE   G+D     ++ +K  D  Y ++G K ++++      +++  V G+   G  +
Sbjct: 123 FGLTEPNAGSDAGGTQTKAEKKGDD-YVINGEKCWITNANYARTVIVTAVTGKNSAGKPI 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  L+      G       +K+G R + T EL   +       LLGD      P +  K 
Sbjct: 182 ISALIVPTDTPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGD------PEKGFKQ 235

Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +Y LD   +S++ + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  
Sbjct: 236 FLYTLDGGRISIAALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDL 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  + A   D+    ++EAA+A++       +  +MA     +A++  GGSGY++E 
Sbjct: 296 ARQMVLKAAWLKDQNLPFTKEAAFAKL-------YASEMAVRTCLQAIQIHGGSGYMKEY 348

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            + R  R+  A  + +G G + +
Sbjct: 349 GVERMLRD--AKLMEIGEGTSEI 369


>gi|169333728|ref|ZP_02860921.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259577|gb|EDS73543.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM
           17244]
          Length = 634

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D     +  +   D  Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAELKGD-YYLLNGGKIFITNADKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS+AT EL F++     +   N+    
Sbjct: 172 TTPGIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSATAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ YA+ R   G  +    V+   +AD+
Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENAVEYAKEREQFGTAIAHNQVIGFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L++  A    E K   E       MA   K +   +   V+ +A++  GGS
Sbjct: 289 ATKLRCARFLNYSAA----ELKEHHEPYGMESAMA---KMYSSDICLEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMDVERAYRDAKICTIYEGT 365


>gi|194293008|ref|YP_002008915.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193226912|emb|CAQ72863.1| Putative acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 385

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252
           I   LTE   G+D A++ ++ +   D  Y ++G K F++ +P + AF ++A+      G 
Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGPGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENVRVPAANIIGGVP-GVGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYAKERKQFGRPIGDFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK   +      ++A  TK +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E    R YR+
Sbjct: 349 IAEYKAERFYRD 360


>gi|83773190|dbj|BAE63317.1| unnamed protein product [Aspergillus oryzae]
          Length = 431

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 29/257 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           + K  +A   GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  I+ A
Sbjct: 158 LAKGKIAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGTKTWITNSPISDILIVWA 217

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           ++E  G++  F+V R  +   P  L    +KNK   R++ T  ++  +       +  D+
Sbjct: 218 KLESTGKIRGFVVER--DQCPPGTLETPAIKNKTALRASITGMIQMDDCPVPKENMFPDV 275

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
              TGP         L+SA + ++ G   +L + +  AR     R+   G  L    +++
Sbjct: 276 EGLTGP------FTCLNSARLGIAFGAMGALEDCLSRARTYALERKQFKGNPLAKYQLIQ 329

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD A D A  T  + ++A   DE KS  E       M  + K   C  A A      
Sbjct: 330 KKLADAATDAAYGTLAATQVARLKDEGKSTPE-------MISMIKRQNCDRALANSRILQ 382

Query: 417 ECIGGSGYIEERSIARH 433
           E  GG+   +E  I RH
Sbjct: 383 EVFGGNATSDEYHIGRH 399


>gi|257466398|ref|ZP_05630709.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917554|ref|ZP_07913794.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691429|gb|EFS28264.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 637

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301
               +G   +   + +    G  +    +K+G RS++T +L F+N         G     
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            N++   ++  +I I    A  ++   + +  EA++YA+ R   G  +  Q  +   +AD
Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L +  A    E K   E       MA   K +   +A  ++ +A++  GG
Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY++   + R YR++   +I  G+
Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365


>gi|257464196|ref|ZP_05628576.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D12]
 gi|317061715|ref|ZP_07926200.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313687391|gb|EFS24226.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 377

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A+ T+  +   D  Y L+G K F++ +P++D  I+ A  +   G   +
Sbjct: 121 FGLTEPGAGSDAASGTTTARWEGDH-YVLNGRKCFITNAPIADFAIISAMTDRTKGVKGI 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D +  G      +NK+G R   T ++   N        L+V     +  KI++  
Sbjct: 180 SVFIVDANTEGWSVGAHENKMGIRGTITSDIVLDNVKVPKENLLDVEG---KGFKIMMNT 236

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +A     EAI Y + R   G  L      +  IA++A  + AA  L
Sbjct: 237 LDYGRIGVAAQALGIAQGALDEAIKYVKERKQFGKPLSKFQNTQFKIAELATKVQAARLL 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +      D AK + +E     + + + KY+  ++A  V   A++  GG GYI++  I R
Sbjct: 297 VY------DAAKIK-DEGGKPGLQSSMAKYYAAEIANEVAYWALQLHGGYGYIKDYPIER 349

Query: 433 HYRESPANSILLGS 446
            YR++   SI  G+
Sbjct: 350 MYRDARITSIYEGT 363


>gi|255010864|ref|ZP_05282990.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
 gi|313148666|ref|ZP_07810859.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
 gi|313137433|gb|EFR54793.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
          Length = 567

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      D  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G + + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   ++ +   + A+ 
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L +  A   D  K+              R+E+  +A++     P+ K    + A     
Sbjct: 347 SLLYETARFVDIYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  +  G  L
Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457


>gi|220921271|ref|YP_002496572.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945877|gb|ACL56269.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 413

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +KI DG Y LSG K W  ++P++D F++ A+    + ++  
Sbjct: 155 FGLTEPDAGSDPGGMKTRAKKI-DGGYLLSGVKTWISNAPIADVFVVWAKSAAHDNQIRG 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++K K+  R++ T E+           LL +++   GP    
Sbjct: 214 F----ILEKGM-KGLSAPKIKGKLSLRASVTGEIVMDGVEVPESALLPNVSGLKGP---- 264

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    +++R +AD+  +IA
Sbjct: 265 --FGCLNRARYGISWGAMGAAEDCWHRARQYTLDRTQFGRPLAQTQLVQRKLADMQTEIA 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+   FDE +   E       M  I K   C  A A+  EA +  GG+G + E
Sbjct: 323 LGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALAIAREARDMHGGNGIMGE 375

Query: 428 RSIARH 433
             + RH
Sbjct: 376 YHVMRH 381


>gi|262278695|ref|ZP_06056480.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259046|gb|EEY77779.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 384

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGIE-GIGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|254471846|ref|ZP_05085247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211959048|gb|EEA94247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 592

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 152/362 (41%), Gaps = 53/362 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P++T+ ++ A+    +P +   +  K+ S E+  T             + LTE   G+
Sbjct: 123 LCPTLTTGAVEAIEKHGSPELKAKYLEKLTSGEWTGT-------------MNLTEPHAGS 169

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257
           D+ A+ ++ + + DG Y +SG K F++     M+D  I L         A   G +  F 
Sbjct: 170 DLNALRAKAEPVGDGSYKISGQKIFITYGDHDMTDNVIHLVLARLPDAPAGTRG-ISLFA 228

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           VP+    +DGS    N +    +++K+G   + T  + + +     G+L+G+ N     +
Sbjct: 229 VPKYFVNDDGSLGEKNDVTVAGVEHKLGIHGSPTCTMSYGDNGGAIGWLIGEENRGLACM 288

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIA 360
             M     L   +  +     +  EA+ Y+  R    G+         +   P +KR + 
Sbjct: 289 FTMMNNARLAVGVQGLGIAERAFQEALAYSLDRKQGRGVGSKTDGMDPIAVHPDIKRTLL 348

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +      A A+ +  A++ D      +A+ +   A  A ++ PI K         V + 
Sbjct: 349 SMKSQTQVARAICYACAHALDMAKLAPDAEQKKFWAERAGLLTPIAKALSTDFGVDVASL 408

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL 472
            ++  GG G+IEE   A+H R++    I  G+     +D++   L   G +    L S +
Sbjct: 409 GIQIHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQSIDLVMRKLPMSGGDQVRSLISEI 468

Query: 473 EQ 474
           ++
Sbjct: 469 KE 470


>gi|326441280|ref|ZP_08216014.1| acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 385

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 41/272 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  ++  DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F+V   LE     G    R  +K+G R++ T EL F+        D+ VS G +
Sbjct: 184 RHGISLFVVDTGLE-----GYAVGRKLDKLGLRTSDTAELSFT--------DVRVSAGDL 230

Query: 310 --EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             E+ K   YL           A+ + +    ++     Y R R V G  +      K  
Sbjct: 231 LGEEHKGFSYLGQNLPQERLAIAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFE 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A+  R  ++ D  +  + EAA A++       +C ++A  VI   ++ 
Sbjct: 291 LASCKAEVDAAEAVVDRALDAHDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375


>gi|325123411|gb|ADY82934.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 593

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 165/404 (40%), Gaps = 53/404 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIADIALDI 366
              I  +     +   A  YA    + R  +G    ++P         ++R + ++  + 
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANN 357

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420
            A+ A +  +    D  K  ++ AA  +      ++ PI K +    A     +A    G
Sbjct: 358 EASRAFAVYVGQQLDITKFSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSS 479
           G GYI E  + +  R+     I  G+      D++     K    F   + T  +D  + 
Sbjct: 418 GHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAND 477

Query: 480 GKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
               +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 478 LDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521


>gi|229060210|ref|ZP_04197579.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|228719092|gb|EEL70704.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 381

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q + I DG  Y +SG K W  ++  ++  I+ A
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + R+ R+  A  + +G G + +
Sbjct: 333 NHAVQIHGGYGYMREYEVERYIRD--AKLLEIGEGTSEI 369


>gi|297565526|ref|YP_003684498.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296849975|gb|ADH62990.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 373

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 23/277 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           K  S E       P+ K        LTE   G++ A++ +  +++  G + L G K W  
Sbjct: 99  KFGSLEQKKKYLVPLAKGEWIGAFCLTEPHAGSNPASMKTTAKRVPGG-WQLDGVKSWIT 157

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           S   +  ++++A+ E  +  FLV    E  +P GL + R + K+G  +  T E  F   F
Sbjct: 158 SGGQAHLYVVMARGEAGICSFLV----EKDTP-GLSFGRPEEKMGLHAAHTTETRFDGVF 212

Query: 296 GFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGIL 349
              + + N+     E + + L  LDS  + ++   V +A A       YA  R   G  +
Sbjct: 213 ---VPEENLLGVEGEGLAQALAGLDSGRLGIAAQAVGMARAAFELAKQYADERTQFGQRI 269

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +   +   +A++   IAAA AL+   A   D  +  + EA+ A++ A  T       A 
Sbjct: 270 REFQGVSFKLAEMHTKIAAARALTLEAAAKKDRGERFTLEASSAKLFASET-------AV 322

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            V  +A++ +GG GY  +  + R+YR++    I  G+
Sbjct: 323 DVTRQAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGT 359


>gi|108797080|ref|YP_637277.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866165|ref|YP_936117.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126432702|ref|YP_001068393.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108767499|gb|ABG06221.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692254|gb|ABL89327.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126232502|gb|ABN95902.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+       SDG Y ++G K W      +D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALRCAAVP-SDGKYVITGEKSWITHGGRADFYTLFARTGEGSRGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +P     G   GL + + + K+G  +  T    +      +  D  +             
Sbjct: 186 IP-----GGQPGLSFGKPEEKMGLHAVPTTTAHYDEAR--VDADRRIGAEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA     EA  YA  R   G  +ID   +   +AD+A  + +A A 
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARAT 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D     S +A+ A+++A          A  V  +A++ +GG GY  +  + R
Sbjct: 299 YLDAARRRDLGLPYSTQASVAKLIA-------TDAAMKVTTDAVQVLGGVGYTRDFRVER 351

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 352 YMREAKITQIFEGT 365


>gi|4557233|ref|NP_000008.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Homo sapiens]
 gi|113019|sp|P16219|ACADS_HUMAN RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|337928|gb|AAA60307.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Homo
           sapiens]
 gi|2821942|emb|CAB02492.1| acyl-CoA dehydrogenase [Homo sapiens]
 gi|4099119|gb|AAD00552.1| short chain acyl CoA dehydrogenase [Homo sapiens]
 gi|119618624|gb|EAW98218.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo
           sapiens]
 gi|311349298|gb|ADP91814.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349300|gb|ADP91815.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349302|gb|ADP91816.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349304|gb|ADP91817.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349306|gb|ADP91818.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349308|gb|ADP91819.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349310|gb|ADP91820.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349312|gb|ADP91821.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349314|gb|ADP91822.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349316|gb|ADP91823.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349318|gb|ADP91824.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349320|gb|ADP91825.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349324|gb|ADP91827.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349326|gb|ADP91828.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349328|gb|ADP91829.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349330|gb|ADP91830.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349332|gb|ADP91831.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349334|gb|ADP91832.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349336|gb|ADP91833.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349338|gb|ADP91834.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349340|gb|ADP91835.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349342|gb|ADP91836.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349346|gb|ADP91838.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349348|gb|ADP91839.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349350|gb|ADP91840.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349352|gb|ADP91841.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349354|gb|ADP91842.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349356|gb|ADP91843.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349358|gb|ADP91844.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349360|gb|ADP91845.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349362|gb|ADP91846.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349364|gb|ADP91847.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349366|gb|ADP91848.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349368|gb|ADP91849.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349372|gb|ADP91851.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349374|gb|ADP91852.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|227487|prf||1704375A short chain acyl-CoA dehydrogenase
          Length = 412

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|326328649|ref|ZP_08194989.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953610|gb|EGD45610.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 40/306 (13%)

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           +T+  +V L T  +  + W P + S E             + + +G+TE  GG+D+AA+ 
Sbjct: 96  ITAPYLVRLGTEEQKQR-WLPGVASGE-------------ILLAIGMTEPSGGSDLAALK 141

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           +   +  D  + ++G K F+++  S D  I   + +   G   +     + +  G    R
Sbjct: 142 TTAVRDGDE-WVINGSKTFITNGYSCDLVITAVRTDPEKGAKGITLFAIEATKEGFSRGR 200

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMR 329
             +K+G   + T EL F N   T   ++G+LN   G +  M+ L    +  A+ +++  +
Sbjct: 201 KLDKVGMEESDTAELFFENVRVTDAEIIGELN--RGFIHMMEELPQERVSCAVANIAQAK 258

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L E + YA+ R   G  +      K  +A++   I  A A   +              
Sbjct: 259 QILLETVQYAKDRKAFGQSIGAFQHNKFLLAELVTQIEVAEAYVDKCV------------ 306

Query: 390 AAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           AA+AR     + A   K+W  +    V+   ++  GG G++ E  +AR +R++    I  
Sbjct: 307 AAHARGELTPVEASKAKWWSSQAQSEVLDHCVQIHGGYGFMNEYRVARAWRDARVTKIWA 366

Query: 445 GSGNAM 450
           GS   M
Sbjct: 367 GSNEIM 372


>gi|229170663|ref|ZP_04298307.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228612823|gb|EEK70004.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621]
          Length = 381

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM         GLTE   G+D     +Q + I DG  Y +SG K W  ++  ++  I+ A
Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                   + R+  F+VP   E     GL      +K+G R++ T E+           +
Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LGD+N      +  K  +Y LD   +S++ + V +A+     A+ YA+ R   G  + + 
Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++  A  L  + A   D  K   +EAA A++ A        + A  + 
Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             A++  GG GY+ E  + R+ R+  A  + +G G + +
Sbjct: 333 NHAVQIHGGYGYMREYEVERYLRD--AKLLEIGEGTSEI 369


>gi|148554517|ref|YP_001262099.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499707|gb|ABQ67961.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 383

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 15/268 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLA 247
           P   T   IG + +TE   G+D+ AI +Q +    G Y ++G K F+++  + D  +++A
Sbjct: 116 PALATGEIIGAIAMTEPGAGSDLKAIRTQARPCEGG-YRITGQKTFITNGQTADLILVVA 174

Query: 248 QVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL 302
           + +   G   +  L +E  +  G    R  +K+G  +  T EL F + F      L G+ 
Sbjct: 175 KTDMAAGAKGMSLLAVEAANAEGFVRGRNLDKLGLHAQDTSELFFEDVFVPEENLLGGEP 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             +   + +  I   L   + + + M  ++     YAR R   G  L+D    +  +A+ 
Sbjct: 235 GRAFAQLMEQLIWERLTVTLNAATDMERAIEMTAAYARERSAFGQRLMDFQNTQFKLAEC 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                 A AL       FD+   R  E       A   KYW  +    V  E ++  GG 
Sbjct: 295 KASAVVARAL-------FDDMLQRFLEGTLDAATAASAKYWASEALGKVADECLQLFGGY 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR + ++ A+ I  G+ + M
Sbjct: 348 GYMTEYPIARLWADARASRIYAGASDIM 375


>gi|218780389|ref|YP_002431707.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761773|gb|ACL04239.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 382

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 15/281 (5%)

Query: 185 PTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           P  KA    P+ K      LG+TE  GG+D+A + +   +  D  Y ++G K F++S   
Sbjct: 110 PEQKAKFITPVLKGDRIAALGVTEPSGGSDVANLKTTAVRDGDH-YVVNGSKTFITSGTR 168

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
              +  A   G  G   +  L+ +    G        K+G  ++ T E+ F N       
Sbjct: 169 AHQLTTAVRTGGDGHKGISFLVIESDTPGYSTSPPMKKMGWWASDTAEIYFDNCRVPVEN 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+ N     + +      L  A+M+    +++  E + Y ++R   G  L    V + 
Sbjct: 229 LIGEENKGFYYIMENFQNERLSLAVMANVTAQMAFEECVKYVKQREAFGKTLNAYQVTRH 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + D+A  I A+T  ++R+A   +    + +E + A       K + C++A  V  +A++
Sbjct: 289 KLVDMATLIEASTEFTYRVAAKMNGGIPQIKEVSMA-------KNFACQIADKVTFDAVQ 341

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY+    + R YR++   SI  G+   M   + N +
Sbjct: 342 IFGGYGYMRGHLVERLYRDNRILSIGGGTTEIMKEIISNFI 382


>gi|148359504|ref|YP_001250711.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|148281277|gb|ABQ55365.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
          Length = 375

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 116/281 (41%), Gaps = 36/281 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P+I S E                 L LTE   G+D+  + +Q     D        K+
Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++D F++LA  +G++   LV +       +GL    + N +G RSN   E+ F N
Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
                  LLG++ +    V    I   LD    + +   V L +A     + Y ++R   
Sbjct: 210 CRIPKTNLLGNIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ I ++   + AA  L F       E + +   A  A  +  I KY   
Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           KMA  V   A++  G +G+ E   + R+YR++    I+ G+
Sbjct: 320 KMAVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360


>gi|157961902|ref|YP_001501936.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846902|gb|ABV87401.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 586

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 146/345 (42%), Gaps = 52/345 (15%)

Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S+T+ + +A+    +  + + + P ++S E+             A  + +TE + G+D+ 
Sbjct: 130 SLTAGAALAIHAHGSEEIKEQYLPMMYSGEW-------------AGAMDMTEPQAGSDLR 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED- 264
            I ++     DG Y ++G K F++    D       ++LA++    G   FLVP++  + 
Sbjct: 177 NIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNA 236

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+    +++K+G + +AT  + F +  G+L+G  N   G V    ++ Y   
Sbjct: 237 DNSLGDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPN--RGLVCMFTMMNYERL 294

Query: 321 AIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQPVMKRAIADIALD 365
           AI  + G+  S A    A  YA+ R     +GG         IL+   V +R +  I   
Sbjct: 295 AI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGANCDPILVHGDV-RRMLLTIRTL 352

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A  ALS       D AK   +    A+      ++ P++K +           A +  
Sbjct: 353 TEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDRGLDAAIMAQQVF 412

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           GG GYI E  I +  R++    I  G+     +D L     G N+
Sbjct: 413 GGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNV 457


>gi|114647349|ref|XP_001162935.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 412

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|120556345|ref|YP_960696.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326194|gb|ABM20509.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 379

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 29/310 (9%)

Query: 157 TSASMVALMTT-----PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           TS   VA + +     P V K WA K    +  P    P+ +      L +TE  GG+D+
Sbjct: 81  TSGGFVASIGSLDIGLPPVAK-WAKKDIREQIVP----PVLRGDKIAALAVTEPGGGSDV 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
           A + ++  K  D  Y ++G K F++S + +D + +  +   EG  G  L+  L++ G+P 
Sbjct: 136 ANLKTRAVKDGDH-YIVNGSKTFITSGIRADHYTVAVRTGGEGHGGISLL--LIDKGTPG 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
                +L+ K+G  ++ T EL F +       L+G  N     +    +   L  +IM+ 
Sbjct: 193 FTTGNKLR-KMGWWASDTAELFFEDCRVPADRLIGAENAGFIAIMSNFLAERLSLSIMAY 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +++   A+ Y R+R   G  +    V +  + D+A  I  A   ++R A      K+
Sbjct: 252 MTAQIAYEAALDYTRQRQAFGRPVAGFQVTRHKLVDMATQIDIAREYTYRCAALMQAGKN 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             ++ A A       K +   +   V  EA++  GG GY+ E  + R YR++   SI  G
Sbjct: 312 PIKQVAMA-------KNFSVDVCEKVTREAVQLFGGIGYMRESVVERLYRDAKILSI--G 362

Query: 446 SGNAMVLDVL 455
            G   ++  L
Sbjct: 363 GGTTEIMKEL 372


>gi|320164485|gb|EFW41384.1| short-chain specific acyl-CoA dehydrogenase [Capsaspora owczarzaki
           ATCC 30864]
          Length = 416

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++  + + D  + L+G K W  ++  + A I+ A  +       +
Sbjct: 157 FGLSEPGNGSDAGAASTTAKLVGDE-WVLNGTKAWITNAYEASAAIVFATTDRSLKHRGI 215

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP      +  G    R ++K+G R ++T +L   +       LLG         E
Sbjct: 216 SAFIVPT-----NAPGFSLGRKEDKLGIRGSSTAQLIMEDCRIPKNMLLGKEG------E 264

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI ++ LD   + ++G  + +A+A     + YAR R   G  + D   ++  IAD+ L
Sbjct: 265 GFKIAMMTLDGGRIGIAGQGLGIAQASLDCAVKYARDRKAFGKPICDLQAIQFKIADMNL 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++  A   D     +E AA A++ A  T  +          +A++ +GG GY
Sbjct: 325 KLHSARLLTWAAAQKADSHLDFTEFAAMAKLAASETATFNAH-------QAIQILGGMGY 377

Query: 425 IEERSIARHYRESPANSILLGS 446
           + +    RHYR++    I  G+
Sbjct: 378 VSDMPAERHYRDARITEIYEGT 399


>gi|311696106|gb|ADP98979.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 388

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 17/285 (5%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           WA K    +  P    P+ +      L +TE  GG+D+A + ++  +  D  Y ++G K 
Sbjct: 111 WAKKDIREQIVP----PVLRGEKIAALAVTEPGGGSDVANLKTRAVRDGDH-YIVNGSKT 165

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           F++S M      +A   G  G   +  LL D    G    +   K+G  ++ T EL F +
Sbjct: 166 FITSGMRADHYTVAVRTGGEGHGGISLLLIDRDMPGFSTGKKLRKMGWWASDTAELFFED 225

Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  L+G  N     +    +   L  AIM+    +++   A+ Y ++R   G  + 
Sbjct: 226 CRVPADRLIGAENAGFIAIMSNFLFERLSLAIMAYMTAQLAYEAALEYTQQRTAFGRNIT 285

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              V +  + D+A  I  A   ++R A      K+  +E A A       K +   +   
Sbjct: 286 GFQVTRHKLVDMATQIDVAREYTYRCAALMQAGKNPIKEVAMA-------KNFSVDVCEK 338

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           V  EA++  GG GY+ E  + R YR++   SI  G G   ++  L
Sbjct: 339 VTREAVQLFGGMGYMRETVVERLYRDAKILSI--GGGTTEIMKEL 381


>gi|264680338|ref|YP_003280248.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210854|gb|ACY34952.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 598

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 64/376 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP   K +  K+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258
           D+  + ++ + ++DG Y ++G+K F+S+   D       ++LA++ +  VG      F+V
Sbjct: 175 DLGLLRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVV 234

Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P  ++  DGS    N +    L++K+G   NAT ++      G L+G+ N          
Sbjct: 235 PKFKVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQ---PVMKRAIAD 361
           + + +++A + V    + L E     A+ YA+     R +SG    D+   P++      
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349

Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             L  A A A   R  ++F            + K R +      ++ PI K +       
Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465
               + +  GG G+I+E  + +  R++  N I  G+     LD+L    L  +G  L  F
Sbjct: 410 ATMLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469

Query: 466 EQLFSTLEQDLGSSGK 481
            +L + L ++ G + K
Sbjct: 470 GKLIAQLVEEEGVNEK 485


>gi|121608699|ref|YP_996506.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553339|gb|ABM57488.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 398

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +  AIG  GLTE   G+D  A+ ++  K++ G Y L G K W  +
Sbjct: 114 FGTEAQRQKYLPPLASGAAIGCFGLTEPDHGSDPGAMATRAHKVAGG-YRLEGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G P GL    +  K+G R++ T E+     
Sbjct: 173 SPVADLFVVWAKEVSEAGAVGPIRGFVLEKGMP-GLSAPAIHGKVGLRTSVTGEIVMDAV 231

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        D+    GP         L+SA   ++   +  AE     A  Y   R   G
Sbjct: 232 FVPEENAFPDVQGLKGP------FTCLNSARYGIAWGALGAAEFCWHRARQYTLERKQFG 285

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +IA       RL    DE  +  E  +       I K   C 
Sbjct: 286 RPLAANQLVQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCG 338

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            A  +   A + +GG+G  +E  +ARH
Sbjct: 339 KALDIARLARDMMGGNGISDEFGVARH 365


>gi|327350756|gb|EGE79613.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 428

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D +++ S  +      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F++ R  +   P  L    +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   DE KS  E       M  I K   C  A        E  GG+   
Sbjct: 336 AAYGTLAAVQVARLNDERKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 389 DEYHIGRH 396


>gi|325479865|gb|EGC82950.1| putative butyryl-CoA dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 561

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
           G GLTE+  G+D A   +      D  Y L+G K F++ +P +  +++ A      G   
Sbjct: 122 GFGLTEENAGSDSAGTETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315
           +   + D    G  +    +K+G RS+ T EL F         D+ V    +  E+ K  
Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFK--------DVKVPKENLLGEEGKGF 232

Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363
            Y   A+M + G R+ +A             A  Y   R   G  +         +AD+A
Sbjct: 233 KY---AMMILDGGRIGIASQALGIAQGAYESAKEYGLAREQFGEAVARMQHNAFILADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  L +      D AK +     Y  + A + K +   MA  + ++A++  GGSG
Sbjct: 290 TELKAARLLIY------DAAKKKDAHVPYG-MDAAMAKLYASDMAEKLTSKALQLYGGSG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           +I+   + R+YR+S    I  G+   M L
Sbjct: 343 FIKGVDVERYYRDSKITQIYEGTNEIMRL 371


>gi|120402485|ref|YP_952314.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955303|gb|ABM12308.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+T +    +DG Y ++G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALTCKA-VAADGGYRINGAKAWITHGGIADFYNLFARTGEGSQGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR  E     GL + + + K+G  +  T    + N   F+  D  +             
Sbjct: 186 VPRDTE-----GLTFGKPEEKMGLHAVPTTAAHYENA--FVEADRRIGAEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA+     A+ Y++ R   G  +ID   +        L    A A+
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDAAVDYSQERTTFGRKIIDHQGLA------FLLADMAAAV 292

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++  GG+GY  +  + R
Sbjct: 293 DAARATYLDAARRRDAGLPYSR-HASVAKLTATDAAMKVTTDAVQVFGGAGYTRDYRVER 351

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 352 YMREAKITQIFEGT 365


>gi|330809083|ref|YP_004353545.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377191|gb|AEA68541.1| putative oxidoreductase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 590

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 35/322 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +   A  + LTE   GTD+  I ++ +  +DG Y ++G K F++    D       +
Sbjct: 154 PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYQITGSKIFITGGEQDLTENIIHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP++  D     G  N +    +++K+G +++AT  + F  
Sbjct: 214 VLAKLPDAPAGPKGISLFLVPKIHVDAQGMLGESNAVSCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------- 345
             G+L+G+ N     +  M     L   I  +     S   A  YA+ R  S        
Sbjct: 274 ASGWLIGEANKGLAAMFTMMNYERLSIGIQGIGCAEASYQNARRYAQERIQSRSPAGAQA 333

Query: 346 ----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARI 395
                  +I  P ++R +  +        A +  +    D AK       R +  A   +
Sbjct: 334 KDKIADPIIVHPDVRRMLLSMKAMTEGGRAFACYVGQQLDLAKFCEHSQERHDAEALVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 394 LTPVAKAFFTDTGLDSCIHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLL 453

Query: 456 NLLEKGT-NLFEQLFSTLEQDL 476
                G   +  +LF+T  +D 
Sbjct: 454 GRKVVGNGGVALRLFTTQIRDF 475


>gi|170691314|ref|ZP_02882479.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143519|gb|EDT11682.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 396

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  IARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364


>gi|126697968|ref|YP_001086865.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           630]
 gi|254974039|ref|ZP_05270511.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-66c26]
 gi|255091425|ref|ZP_05320903.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           CIP 107932]
 gi|255099539|ref|ZP_05328516.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-63q42]
 gi|255305396|ref|ZP_05349568.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           ATCC 43255]
 gi|255313085|ref|ZP_05354668.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-76w55]
 gi|255515842|ref|ZP_05383518.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-97b34]
 gi|255648935|ref|ZP_05395837.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-37x79]
 gi|260682146|ref|YP_003213431.1| acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260685744|ref|YP_003216877.1| acyl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519049|ref|ZP_07405396.1| acyl-CoA dehydrogenase family protein [Clostridium difficile
           QCD-32g58]
 gi|115249405|emb|CAJ67220.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium
           difficile]
 gi|260208309|emb|CBA60754.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           CD196]
 gi|260211760|emb|CBE02105.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           R20291]
          Length = 377

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  + + D  Y L+G K F+++ P  D  I++A  +   G    
Sbjct: 121 FGLTEPGAGSDAGGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311
              + +   +G      ++K+G R   T +L F N       LLG       ++ G +E 
Sbjct: 180 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I +    A +++   + +L EA+ Y ++R   G  +      +  IAD+   + AA  
Sbjct: 240 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   D     ++E+A A       KY+  ++A  V  +A++  GG G+I++  I 
Sbjct: 296 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 348

Query: 432 RHYRESPANSILLGS 446
           R YR++   SI  G+
Sbjct: 349 RMYRDARIVSIYEGT 363


>gi|17545475|ref|NP_518877.1| glutaryl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427767|emb|CAD14286.1| probable glutaryl-coa dehydrogenase oxidoreductase protein
           [Ralstonia solanacearum GMI1000]
          Length = 435

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 20/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y LSG K W  +
Sbjct: 153 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLSGAKMWITN 211

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 212 SPIADVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDEVF- 270

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-- 353
             + + N+  G V  +K     L+SA   ++   +  AE+  +  R++V       +P  
Sbjct: 271 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLA 327

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A  
Sbjct: 328 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALD 380

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  + RH
Sbjct: 381 IARMARDMLGGNGISDEFGVIRH 403


>gi|311107961|ref|YP_003980814.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762650|gb|ADP18099.1| acyl-CoA dehydrogenase, N-terminal domain protein 13 [Achromobacter
           xylosoxidans A8]
          Length = 384

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   +G + ++E   G+D+ ++ +   K   G Y L+G K F+++ + +D   ++A
Sbjct: 115 PRMATGELVGAIAMSEPGAGSDLKSVRTTATK-EGGEYVLNGSKTFITNGLHADLVCVVA 173

Query: 248 QVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + + + G   V  ++ E     G    RL  K+G +S  T EL F         LLG + 
Sbjct: 174 KTDAQAGARGVSLIMVETQGLAGFRRGRLLEKLGQKSLDTAELFFDGARVGQDCLLGGIE 233

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G  + M+ L    L  A+ +V+ MR ++ E + YA  R V G  LI+       + +
Sbjct: 234 -GRGFAQLMQQLPRERLLIAVGAVATMRRAIEETVAYASTRQVFGQALIE-------LQN 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               +A    ++   A   D+   R          A + K+W  +M   VI E ++  GG
Sbjct: 286 TRFKLAECETVATIAARFVDDCIERQLAGTLDLSTAAMAKWWTTQMNCQVIDECLQLHGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  IAR Y ++    I  GS   M
Sbjct: 346 YGYMLEYPIARMYADARVGKIYGGSNEIM 374


>gi|301311218|ref|ZP_07217146.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3]
 gi|300830792|gb|EFK61434.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3]
          Length = 569

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKQEGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTARYVDIYKALDDIARERKLTPEERKEQKQYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457


>gi|255319521|ref|ZP_05360735.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378455|ref|ZP_06071612.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303461|gb|EET82664.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299740|gb|EEY87652.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 378

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI+ + ++  D  + ++G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAISCRAERDGDE-WVINGTKQFITSGKHAQVALVFAITDKTSGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP         G     +++K+G  ++ T  + F N       LLG       ++   
Sbjct: 182 FLVPT-----HTPGYVVANIEDKMGQHASDTATIIFENCRIPAKNLLGKEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  SV   R +L  A+ YA  R   G  ++    +   +AD+A  I A
Sbjct: 237 LEAGRIGI----AAQSVGMARAALDAAVQYANERKAFGVEIVQHQAVAFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L F  A+  D      +EA+ A++ A         MA  V +++++  GG GY+ + 
Sbjct: 293 ARQLVFHAASLKDAGLPCLKEASMAKLFAST-------MAERVCSDSIQIHGGYGYVTDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|148653859|ref|YP_001280952.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572943|gb|ABQ95002.1| isovaleryl-CoA dehydrogenase [Psychrobacter sp. PRwf-1]
          Length = 395

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 18/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +   DG Y L+G K W  + P +D  ++ A+    +G   +
Sbjct: 128 LAMSEPGAGSDVTSMKLRAEA-KDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              L+E G P     Q+L +K+G R + T E+ F N F   + + N+  G    +++L+ 
Sbjct: 187 TAFLVEKGMPGFGTAQKL-DKLGMRGSHTGEMVFDNVF---VPEENIMGGLNNGVQVLMS 242

Query: 318 ---LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               + A+++   V  M+  +   I Y   R   G  + +  +++  +AD+   + AA +
Sbjct: 243 GLDYERAVLAAGPVGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAARS 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             + +  + D    R   A ++R +         WC + A  +  E ++  GG+GY  E 
Sbjct: 303 FLYTVGKNLDMLDKRG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEY 360

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 361 PLGRLWRDAKLYEIGAGT 378


>gi|325123410|gb|ADY82933.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 600

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|294501894|ref|YP_003565594.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351831|gb|ADE72160.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 377

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 28/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           PM         GLTE   G+D   + +    + DG  Y L+G K F+++   +D +++ A
Sbjct: 113 PMATGEKIGAYGLTEPSAGSDAGGMRTLA--VKDGEDYILNGSKIFITNGGEADIYVVFA 170

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++   E R   F++ + +      G    + + K+G RS+ T E+ F +     +   N+
Sbjct: 171 RIDPNEKRTSAFIIEKDMP-----GFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENL 222

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
                E  K+ ++ LD     ++   V +A+     A+ YA+ R   G  +I Q  +   
Sbjct: 223 LGNEGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L+++ A    +     +E+A       ++K +    A  V  EA++ 
Sbjct: 283 LADMATSIEAARLLTYQAAWLESQGLPYGKESA-------MSKLYAGDTAMKVTTEAVQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY ++  + R  R++    I  G+     L +   L K
Sbjct: 336 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRYLAK 377


>gi|78042819|ref|YP_360157.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77994934|gb|ABB13833.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 381

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----V 253
            GLTE   GTD  ++ +   K  D  Y L+G K F+++   ++ +++ A V+       +
Sbjct: 123 FGLTEPSAGTDAGSLKTTAVKDGD-YYVLNGSKIFITNGGEAEIYVVFATVDKNKRHKGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E G+P G  + + + K+G RS+ TVEL F N     +   N+     +  K
Sbjct: 182 SAFIV----EKGTP-GFNFGKKEKKMGIRSSPTVELIFENC---RIPKENLLGEEGQGFK 233

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  LD   + ++   V +A+     A+ YA+ R   G  + +   +   +AD+A  I 
Sbjct: 234 IALSTLDGGRIGIAAQAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQ 293

Query: 368 AATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           AA  L +  A    N+    K+           A + K +  + A  V  +A++  GG G
Sbjct: 294 AARLLVYHAAWLESNNLPYGKA-----------ASMAKLFAAETAMEVTTKAVQIFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R  R++    I  G+
Sbjct: 343 YTREYPVERMMRDAKITEIYEGT 365


>gi|23099150|ref|NP_692616.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22777378|dbj|BAC13651.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 380

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 47/273 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252
            GLTE   G+D    T    K+    Y ++G K F+++     FI +  V         R
Sbjct: 123 FGLTEPNAGSDSGG-TKTTAKVDGDDYIINGEKCFITNASYAKFITVTAVTEINKDGRNR 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +   LVP         GL      +K+G R + T E+        +L D+ V   P  ++
Sbjct: 182 ISAILVPT-----DTPGLTITSNYDKMGVRGSDTAEI--------VLNDVRV---PRSNL 225

Query: 313 ---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                    + L  LD   +S++ + V +A+A     + YA+ R   G  + +   ++  
Sbjct: 226 LGTEHKGHPQFLQTLDGGRISIAALGVGIAQAALDKALAYAKERKQFGKSISNFQAIQFK 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+++  A  +  + A   DE K+ S+EAAYA++ A  T             +A++ 
Sbjct: 286 LADMAMEVELARNMVLKAAWLKDEGKNFSKEAAYAKLFATETATRSAN-------QAIQI 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG GY+ E  + R+ R+  A  + +G G + +
Sbjct: 339 HGGYGYMREYEVERYLRD--AKLLEIGEGTSEI 369


>gi|302343873|ref|YP_003808402.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301640486|gb|ADK85808.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 387

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 23/275 (8%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G  +TE   G+D+ AI+S      D  + LSG K W  ++P++D  +  A  +   G   
Sbjct: 123 GFAITEPNAGSDVMAISSVAVDKGDH-FELSGAKTWISNAPVADCVVFYAYTDRAAGSKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + D   N        +K+G+  + T E+      G  +   N+   P +  KI+  
Sbjct: 182 LSAFVVDLKDNPAVRVSTLDKLGSHCSPTGEIVLD---GARVPRENLLGRPGDGAKIVFG 238

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A   V   +  L +A+ YA  R   G  +    +++  IA +A ++  A  
Sbjct: 239 SLNQTRLQAAAGGVGLAQACLDQAVAYANSREQFGRPIAQNQMIQDQIARMATEVECARL 298

Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L +R A   D+ +     E A A       KY   ++A     +AM  +G  GY  E  +
Sbjct: 299 LVYRAAWQKDQGRLDNGREVAMA-------KYKAGEVAAMCAEQAMRILGAYGYSTEYPV 351

Query: 431 ARHYRESPANSILLGSGN----AMVLDVLNLLEKG 461
           AR++R++P   ++ GS N     + LD L L + G
Sbjct: 352 ARYHRDAPTYYMVEGSANICKWIVALDELGLRKAG 386


>gi|330961142|gb|EGH61402.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 600

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +  +DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPATDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  EDGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNEDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L      + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGATMLGYSGYLYSL----EYARDR--P 324

Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D      +PV              ++A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPDSKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTETGETDDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +      ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KQAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|327282658|ref|XP_003226059.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 410

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 34/276 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  + + D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 150 FALSEPGNGSDAGAASTVARLVGDE-WVLNGTKAWITNAWDAAATVVFATTDKGLKHKGI 208

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R+++T  L F +       LLG+  +      
Sbjct: 209 SAFLVPM-----PTPGLSLGKKEDKMGIRASSTANLIFEDCRIPKDNLLGEEGMG----- 258

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LDS  + ++   + +A+A     + YA +R   G  +     ++  +AD+AL
Sbjct: 259 -FKIAMQTLDSGRIGIASQALGIAQAALDCAVDYAEKRMAFGAPITKFQAIQFKLADMAL 317

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K  ++EAA A++ A        + A ++  +A++ +GG GY
Sbjct: 318 ALESARLLTWRAAMLKDNGKPYTKEAAMAKLSA-------SEAATSISHQAIQILGGMGY 370

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E    RHYR++    I  G+     L +   L K
Sbjct: 371 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 406


>gi|288922120|ref|ZP_06416323.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288346522|gb|EFC80848.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 385

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 18/245 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLV 258
           LTE+  G+D A + +  ++  D  + ++G K F++ +P++D F++ A+ +   + G  + 
Sbjct: 122 LTEENAGSDPAGLATSARRDGDD-WVINGAKRFITNAPVADVFMVFARTDPDAKGGRGIT 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKI 314
             ++E G+P GL      +K+G     T ++   +        + G+  V  G    M+ 
Sbjct: 181 AFMVERGTP-GLGVGPKDHKMGQAGAWTADVTLDDVRVPASTVIGGEDGVGRGYATAMRC 239

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  +  A + V   +  L E++ YA  R   G ++ +  +++  +AD A D+ AA AL
Sbjct: 240 LAHGRIHIAALCVGLTQRLLDESVAYAASRVQGGSVIGEHQLVQGLLADSATDLYAARAL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +A  FD+           RI     KY+  +    V   A++  GG+GY+    + R
Sbjct: 300 VTEVAAGFDDGSD-------TRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVER 352

Query: 433 HYRES 437
            YR++
Sbjct: 353 FYRDA 357


>gi|253571951|ref|ZP_04849356.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6]
 gi|251838548|gb|EES66634.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6]
          Length = 568

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 36/343 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +      DG + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R+++K+G   + T EL +      L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVDVRRIEHKLGIHGSPTCELVYKKAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L     FE +
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETV 466

Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
             + E + L S  KK+      S +  KE  D+ L  F   ++
Sbjct: 467 PCSPEMEPLMSRLKKMADQFEASTNAVKEAQDQELLDFTARRL 509


>gi|294651447|ref|ZP_06728761.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822693|gb|EFF81582.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 600

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQVEGR---- 252
           LTE   G+D+  I ++ +   DG Y +SG K F+S+    M+D    I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNDDGSYAISGEKIFISAGEHDMADNIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  L  DGS    N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNLNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGATEIQALDLL 453


>gi|292655298|ref|YP_003535195.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370626|gb|ADE02853.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 380

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 33/296 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ + +      L+E   G+D+ A+ +   K  D      G  W  +  +
Sbjct: 103 NEEQKQTYLTPLNEGTDIGAFALSEPGAGSDVPAMETTAVKDGDEYVVDGGKLWISNGSV 162

Query: 240 SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +D  ++ A+ +   G      F+V   ++DG       +  ++K+G++   T EL F + 
Sbjct: 163 ADTVVVFAKTDPDAGNKGISSFVVRPEVDDG----FVVEGTEHKLGDKGCPTAELRFDDM 218

Query: 295 F---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                 LLG      G V+ +K L    +  A  S+   R +L +A+ YA  R       
Sbjct: 219 RIPEDRLLG--GEGDGFVQALKTLNGGRITIAARSIGIARAALDDAVTYAGERE-----Q 271

Query: 350 IDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            DQP+     +K  +AD+   + AAT L  + A+     ++  +EAA A++       + 
Sbjct: 272 FDQPIGDFQAIKHELADMDTKVQAATLLMHKAADLKMRDETFIKEAAQAKL-------YA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +++  V  E ++  GG GY ++ +  R+YR++  N I  G+   +   + + L+K
Sbjct: 325 SEISREVANEGIQIHGGYGYTKDFAAERYYRDAKLNEIYEGTSEILRNTIGDWLQK 380


>gi|168183859|ref|ZP_02618523.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|237795619|ref|YP_002863171.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|182673115|gb|EDT85076.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|229262853|gb|ACQ53886.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 377

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGNHYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +    G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWEGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|148652718|ref|YP_001279811.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571802|gb|ABQ93861.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 594

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   GTD+  I ++     DG Y +SG K F++    D       ++LA+     EG 
Sbjct: 166 LTEPHAGTDLGIIKTKATPNEDGSYAISGTKIFITGGEHDLTENIIHLVLAKTPNAPEGS 225

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ + +     G  N L    +++K+G + +AT  + F    G+++G+ N  
Sbjct: 226 KGISLFVVPKFIVNADGSLGERNALAAGSIEHKMGIKGSATCVMNFDGAKGWMVGEENTG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +  M     +   +  + G  ++   A  YA  R                  +I   
Sbjct: 286 LASMFVMMNYERVTMGLQGLGGTELAYQNAAAYALDRGQGRSDTQIQSPEKPADAIIHHA 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407
            ++R + +   +  A+   +  +A   DE+K      +    AA   ++ PI K +    
Sbjct: 346 DVRRMLLNARANAEASRCFAMYVAKQLDESKFSIDPENAKAAAARVALLTPIAKAFLTDK 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A     +  +  GG GYI E  + +  R++  + I  G+     LD+L
Sbjct: 406 ALEATVDCQQVFGGHGYIREWGMEQIVRDTRISQIYEGANGIQALDLL 453


>gi|332291020|ref|YP_004429629.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169106|gb|AEE18361.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 394

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 17/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  I+ A+    +G   +
Sbjct: 125 LCITEPFGGSDVAGMRTTAVKDGDH-YVINGSKTFITNGVYSDYLIVAAKTAPELGGKGM 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L D    G+   +L +K+G R++ T E+ F N       L+G+ N   G +      
Sbjct: 184 SIFLLDRDMPGVSATKL-DKLGWRASDTGEIAFDNVKVPVANLMGEENAGFGYIMQHFAS 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSF 374
             L   I + +    ++  A+ Y + R ++ G+ ID+   ++  +A+   ++  + A ++
Sbjct: 243 ERLIMGINAHARAEYAIEYALDYMKER-MAFGVTIDKFQALRHKLAERQAEVEMSKAFNY 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A   ++ +   +EA  +++ A        K+A  VI + ++ +GG GY+EE  +AR  
Sbjct: 302 TIAYRLNKGEYVVKEATMSKLTA-------TKIADEVIYDCLQMLGGYGYMEEYPLARML 354

Query: 435 RESPANSILLGSGNAMVL 452
           R+S    I  G G + +L
Sbjct: 355 RDSRLGPI--GGGTSEIL 370


>gi|328869223|gb|EGG17601.1| acyl-Coenzyme A dehydrogenase [Dictyostelium fasciculatum]
          Length = 426

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 36/263 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +   D  + L+G K W  ++  +  FI++A V+  VG   +  
Sbjct: 169 LSEAGSGSDAFALKTRAEAKGD-YFVLNGTKMWITNAQEAGVFIVMANVDPSVGYKGITA 227

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            L D    G+   + ++K+G RS++T E+        +L D+ V   P E++        
Sbjct: 228 FLVDRDTPGVSIGKKEDKLGIRSSSTCEV--------VLQDVKV---PKENILGHLGKGY 276

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ I  L+   + ++   + LA+      + Y  +R   G  L D   M+   AD+A+DI
Sbjct: 277 KLAIEGLNEGRIGIAAQMIGLAQGAFDSTMPYIMQRTQFGKPLADFQGMQFTYADLAVDI 336

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A   L++  A        R +EA    +  A + K  C ++A  V +  +  +GG G+ 
Sbjct: 337 EAGKLLTYNAA--------RMQEAGLPFVHQASMAKLHCSRVAEKVASACISMMGGVGFT 388

Query: 426 EERSIARHYRESPANSILLGSGN 448
           +E    R++R+     I  G+ N
Sbjct: 389 KEFDAERYFRDCKVGQIYEGTTN 411


>gi|296165235|ref|ZP_06847782.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899424|gb|EFG78883.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 399

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 20/289 (6%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +  R   PT    M  +     LG+TE   G+D+A
Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G   
Sbjct: 157 NLRTRAVRDGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R  +K+G R + T EL F +       L+G  N  +G ++ M+      L  A+ + + 
Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPAENLVGAAN--SGFLQIMQQFQAERLGIAVQAYAT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A  +AR R   G  L  + V++  +A++A  +  A   +  +   +   +   
Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQVIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            E +    MA  T  + C     V+ EA++  GG GY+ E  I RHYR+
Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375


>gi|290967961|ref|ZP_06559510.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781867|gb|EFD94446.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 381

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 21/270 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVGC 255
            GLTE   GTD    ++   K +DG Y L+G K F +    + ++  F    + +G  G 
Sbjct: 123 FGLTEPNAGTDALNGSTTATKNADGTYTLNGSKVFNTNGGDAEITIVFAATDKSKGAKG- 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
            +   ++E G+P G  Y + + K+G R+    EL F +    ++   N+     E  KI 
Sbjct: 182 -MSAFIVEKGTP-GFSYGKKEVKMGIRACVQRELVFQDV---VVPAANLLGKEGEGFKIA 236

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD   + V    + +AE     A+ YA  R   G  ++ Q  +   +AD+ L I  A
Sbjct: 237 MMTLDGGRVGVGAQALGIAEGAFNKAVQYANERIQFGKPIMKQQAVAFMLADMKLKIETA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               ++ A    +   +S    Y+ + A I K +   +A  V  +A++  GG G+  +  
Sbjct: 297 RWAVYKAAWKMGQKDVKS----YS-MDASIAKKYASDIAMQVTTDAVQVFGGYGFTRDYP 351

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLE 459
           + R+ R++    I  G+     + +   L+
Sbjct: 352 VERYMRDAKITQIYEGTNQVQQMIISGFLK 381


>gi|229161302|ref|ZP_04289287.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228622116|gb|EEK78957.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 569

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVISAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMVIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|183220511|ref|YP_001838507.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910620|ref|YP_001962175.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775296|gb|ABZ93597.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778933|gb|ABZ97231.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 524

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 140/294 (47%), Gaps = 25/294 (8%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGC 255
           G  LTE   G+D A++ ++ +++  G + L+G K F+++ P+   FI++A+   +GR   
Sbjct: 129 GFALTEPASGSDAASLLTKAEEVEGG-WKLNGSKTFITNGPVGQVFIVMARTSEKGRGPM 187

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            +   ++E  +P G    ++  K+G+ ++ T EL F +       LLG LN  TG +   
Sbjct: 188 GISAFIVESDTP-GFKVSKVLKKLGHHTSMTAELVFEDMIIPKENLLGPLN--TGFMRIG 244

Query: 313 KILIYLDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           K  +  +  +  V+G    M   L + + YA  R   G  +     M+  +    + I A
Sbjct: 245 KETLEWERTVF-VAGLAGAMEFCLRKGLRYANERVQFGKPISSFYGMRDILVRNWVYIQA 303

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L + +A   D+      E++  ++++        ++A  V  + ++  GG GY++E 
Sbjct: 304 ARRLIYWVAERKDKGIPSPLESSLGKLIS-------SELAEDVAKDTVQLFGGYGYMKEY 356

Query: 429 SIARHYRESPANSILLGSGNAMVL-DVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           ++ R YR+    +I  G G + +   +++ L  G   F++ F  +E    +S K
Sbjct: 357 AVERFYRDVKLGTI--GGGTSEIQRSIISSLYPGKEKFQKEFKRIESPSNTSDK 408


>gi|115378539|ref|ZP_01465695.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822382|ref|YP_003954740.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115364461|gb|EAU63540.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395454|gb|ADO72913.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 379

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 13/266 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P  K      LG++E   G+D+A + +   +I    Y ++G K ++++     FI L   
Sbjct: 114 PALKGEKIAALGVSEPGVGSDVANMKTTA-RIDGDDYVINGSKMWITNGTRADFITLGVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
            G  G   +  +       G    +  +K+GN S+ T  L F +      ++LG  N   
Sbjct: 173 TGEAGYGGISLVTFPTDVKGFSVSKKLDKVGNLSSDTAILFFEDCRIPRRYVLGAENEGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +        L +A+ +V+GM   + +A+ Y   R   G  L+   V +    +    I
Sbjct: 233 YSIMTNFQGERLVTALTAVAGMERMVEDALRYGTEREAFGKPLLKFQVWRHKFVEHLTAI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+ ++  +E + A++ A         +A  V  +  +  GG GYIE
Sbjct: 293 EAAKRLTYHAVAVFDQKENAVKEISMAKLFA-------GDLAQRVAYDCQQFFGGMGYIE 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E  IAR +R+     I +G G + V+
Sbjct: 346 ETPIARAWRD--IRLITIGGGTSEVM 369


>gi|30265365|ref|NP_847742.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530907|ref|YP_022256.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188176|ref|YP_031429.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|65317319|ref|ZP_00390278.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|165871283|ref|ZP_02215932.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167635753|ref|ZP_02394063.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167640413|ref|ZP_02398677.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170688154|ref|ZP_02879365.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170708036|ref|ZP_02898484.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177651922|ref|ZP_02934505.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190569104|ref|ZP_03022003.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196036515|ref|ZP_03103910.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|227818104|ref|YP_002818113.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228949062|ref|ZP_04111334.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124845|ref|ZP_04254023.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|229601594|ref|YP_002869556.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687217|ref|ZP_05151075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254724696|ref|ZP_05186479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735270|ref|ZP_05192979.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744473|ref|ZP_05202153.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254755811|ref|ZP_05207843.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254762151|ref|ZP_05213997.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30260043|gb|AAP29228.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47506055|gb|AAT34731.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182103|gb|AAT57479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164712950|gb|EDR18478.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167511633|gb|EDR87015.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167528862|gb|EDR91619.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170127009|gb|EDS95888.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170667847|gb|EDT18599.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082626|gb|EDT67690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190559772|gb|EDV13758.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|195990848|gb|EDX54821.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|227005111|gb|ACP14854.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228658636|gb|EEL14298.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228810635|gb|EEM56984.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229266002|gb|ACQ47639.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 379

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E   T   PM +       GLTE   G+D   + +  ++  D  Y L+G K F++
Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           +  ++D +++ A  +           + +    G    + ++K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
                LLG+        +  KI +  LD     ++   V +A+     ++ YAR R+  G
Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERYQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A D+ AA  L+++ A    E     +E+A +++ A         
Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|160915342|ref|ZP_02077554.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991]
 gi|158432733|gb|EDP11022.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991]
          Length = 634

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     +    Y L+G+K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYVLNGNKIFITNADKADIYVVFAS 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 172 TNPELGTKGISAFIVEKGMGGFTFGDHYDKMGIRSSSTAELIFNDV---RVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYENALAYAKEREQFGKPIAQQQGIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++ +    E+A A++       +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARMLVYSAAELKEQHEPYGMESAMAKL-------YASDIALEVCNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMDVERAYRDAKITTIYEGT 365


>gi|293611086|ref|ZP_06693385.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826738|gb|EFF85104.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 600

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|239940162|ref|ZP_04692099.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986650|ref|ZP_04707314.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443592|ref|ZP_06582982.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346539|gb|EFE73443.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 383

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 53/306 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   +    + W P++ S E              AIG  GLTE   G+D   + ++
Sbjct: 95  AKTIASWGSEEQKRQWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLVTR 140

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +   G Y ++G K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 141 AVR-DGGDYVVNGTKMFITNGTWADVVLLFARTNDSPGHRGVSAFLVPT-----DTPGLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIY--LDSAIMSV 325
            + +  K+G R  AT EL        +L D+ +      GP      L    L    MSV
Sbjct: 195 RRTVHGKLGLRGQATAEL--------VLQDVRIPASCLLGPEGKGFPLAMSALAKGRMSV 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+A     + YA  R   G  +    +++  ++DIA+D+ AA  L++R+A+  
Sbjct: 247 AAGCVGIAQAAQDAAVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLI 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  +  A+ A++ A      C          A++  GG GYI+E  + +  R++   
Sbjct: 307 DRGQDFATAASKAKLYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVM 359

Query: 441 SILLGS 446
           ++  G+
Sbjct: 360 TLYEGT 365


>gi|188992153|ref|YP_001904163.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167733913|emb|CAP52119.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 382

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K  DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D +  G    + + K+G R++AT E+EF++   ++     V     E  K  +  
Sbjct: 183 TAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVLGAEGEGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|325000273|ref|ZP_08121385.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 371

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 33/328 (10%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +++  AG  ++P V+S      M  P + ++ +P+   R       + +        + +
Sbjct: 67  LSRASAGIAITPLVSS-----YMAAPHLVRNGSPEQRDRWL-----SRISGGEAVAAIAV 116

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCFL 257
           TE   G+D+A +TS+ ++  DG + + G K F+++  ++D  I+ A+  G     +  F 
Sbjct: 117 TEPGAGSDVAGLTSKARRTDDG-WVIDGRKMFITNAGLADVLIVGARSGGPRHSGITLFE 175

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           VP+        GL +     K+G RS+ T E+           ++G  N     + +   
Sbjct: 176 VPK-----DAPGLSFGSPLTKMGWRSSDTREVVLDGVVVPHDAVVGAENRGFHQIMEGFQ 230

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  +  A M +      L     + R R   G  L     ++  +A + +D+ AA  +++
Sbjct: 231 LERIALAGMGIGQAAECLDLVRAHVREREAFGAPLTGLQTVRHRVATMEIDLDAARLVTY 290

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D           A +     KY     A  +I +A++  GG+G++EE  +ARHY
Sbjct: 291 QAAARMDAGHPE------APVSVARAKYLAAVAANRIIDDAVQLFGGAGFVEETPVARHY 344

Query: 435 RESPANSILLGSGNAMV-LDVLNLLEKG 461
           R+  A  + +G G   V L++L+   KG
Sbjct: 345 RD--ARILRIGGGTDEVQLEILSKSMKG 370


>gi|159900483|ref|YP_001546730.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893522|gb|ABX06602.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 376

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 39/271 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  ++ +  + + D  Y L+G K W     ++D F++ AQVEG+V  FLV
Sbjct: 122 FALSEPNVGSDAKSVETSARLVGDR-YVLNGRKRWMTFGQIADVFLLFAQVEGKVTAFLV 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----------FGFLLGDLNVSTGP 308
            R     SP G   + +   +G R +   EL   +            GF L  +  S   
Sbjct: 181 ER----NSP-GFSTEPITGILGTRGSMLAELRLDDCEIPKENRLGGLGFGLAAIGTSA-- 233

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                    LD    SV+   V +A+A     + Y   R   G  + D  ++++ + ++ 
Sbjct: 234 ---------LDIGRYSVAWGSVGIAQACLEACVEYTSTRRQFGVPIKDHDLVRQMMTNMI 284

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  AA  L ++     D   SR+    +      I KY+    A  + A+A++  G +G
Sbjct: 285 TNTKAARMLCYQAGYLKDSGDSRTVMETW------IAKYFASTAAMKIAADAVQLHGANG 338

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454
             EE  + R++R++    I+  S     +++
Sbjct: 339 CSEEYPVQRYFRDAKIMEIIEASTQLQQMNI 369


>gi|111022099|ref|YP_705071.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821629|gb|ABG96913.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 388

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 18/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + +TE   G+D+AAI++      D +  L+G K F+S+ M +D  I++A+ +   G+ G 
Sbjct: 131 IAMTEPGAGSDLAAISTTALPDGDDL-VLNGTKIFISNGMLADFVIVVAKTDPAAGKKGV 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            L+  ++EDG   G       +KIG  +  T EL F +       +LG+ N   G +   
Sbjct: 190 SLL--VVEDGMA-GFTRNGPLHKIGLTAQDTAELVFDDVRVPRENVLGEPNDGFGYLRHN 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ S++ MR +  +A+ Y+  R   G  + D    +  +A++A +I  A   
Sbjct: 247 LPQERLSVAVTSMASMRRTFDQALTYSCDRTAFGRRVADFQANRFYLAELATEIEIAQCF 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R     D A    +E     + A + K+W  ++   V+  A++  GG GY+ E  +A+
Sbjct: 307 TDRCI--LDAANGTLDE-----VTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYDVAQ 359

Query: 433 HYRESPANSILLGSGNAM 450
            Y +     I  G+   M
Sbjct: 360 DYLDCRGGPIYAGTTEIM 377


>gi|94500571|ref|ZP_01307102.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94427361|gb|EAT12340.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 386

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 47/311 (15%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           MS +   AS++  + +    +++ P++ S EY             A    LTE + G+D 
Sbjct: 89  MSVTNMVASVIQAVGSDEQKQNYLPRLCSGEYR------------AGAFCLTESQAGSDP 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GR-VGCFLVPRLLED 264
           +A+  Q  K   G + +SG K +++S   +D  I+ A  +     G+ + CF+V     +
Sbjct: 137 SAMKCQANKTEKG-WQISGSKLYITSGAYADVLIVWAVTDKTAKPGKGISCFVV-----E 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI-YLDS 320
            +  G+   + +NK+G   +AT E+ F N   T G LLG++N      +  KI +  L  
Sbjct: 191 ANRQGISIGKEENKMGQSGSATNEVIFENVVVTEGDLLGEVN------QGFKIAVGELAG 244

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++ + + +A+     AI YA+ R   G  + D   ++  +A+    + A   L   
Sbjct: 245 GRIGIASLALGIAQSAHDYAIEYAKERQQFGQSIADFQGIQWMLAEAETKLNATRLLVL- 303

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 EA  R E+       A + K +  +    +   A++ +GG+GY+++  + +  R
Sbjct: 304 ------EAAHRKEQGQEFATQASMAKLFASEEGNRICYNALQILGGAGYLKDYPLEQKVR 357

Query: 436 ESPANSILLGS 446
           +    SI  G+
Sbjct: 358 DIRITSIYEGT 368


>gi|331698310|ref|YP_004334549.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952999|gb|AEA26696.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 385

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 37/283 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W P++ S E             V    GLTE   G+D + +++  ++  D   
Sbjct: 100 TEEQKKSWLPRLASGE-------------VTASFGLTEAEAGSDPSTLSTVARRDGDDWV 146

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIG 280
                ++  ++P++D  ++ A+      G  G   FLVP     G+P GL      +K+G
Sbjct: 147 INGSKRYITNAPVADVIMVFARTNPDAPGNRGISTFLVPA----GTP-GLSTGPKDHKMG 201

Query: 281 NRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLA-E 334
                T ++   +        + G+  +  G     K L +    I +V  GM   L  E
Sbjct: 202 QFGAWTSDVHLDDVRVPAEAVVGGEAGIDNGFRIAAKCLAHGRVHIAAVCVGMAARLVHE 261

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YAR R   G  +    +++  +AD   D+ A  AL  + A +FD+   +    A A 
Sbjct: 262 TVEYARARQAGGKPIAAFQLVQGMVADSVTDLHAGRALVRQAARAFDDGSDKVAGPAAA- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                 KY+C +M   V   A++  GG+GY+   ++ R YR++
Sbjct: 321 ------KYFCSEMVGRVADRAVQVHGGAGYMRGVAVERFYRDA 357


>gi|226358241|ref|YP_002787980.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319884|gb|ACO47878.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 598

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 37/317 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + L+E   G+ +A IT+      DG Y ++G K ++S    +       ++LA+++G   
Sbjct: 161 MALSEPHAGSGLADITTTAAPRGDGTYSITGTKMWISGGEHELSENIVHLVLARIQGAPA 220

Query: 253 ----VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  FLVPR  + +DGSP   N +    L +K+G R      L F     T G L+G
Sbjct: 221 GVKGISLFLVPRYRVQDDGSPGECNHVVLAGLNHKMGYRGTTNTLLNFGEGGETIGELVG 280

Query: 301 DLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-- 354
           +       +     + +I + + + ++  +G   SL  A    + R  S    +  PV  
Sbjct: 281 EPGRGLAQMFYMMNEARIGVGMGAVMLGYAGYLASLEYARERLQGRPASQKDPLSPPVPI 340

Query: 355 -----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWC 404
                ++R +      +    AL    ++  D+ ++  E+          ++ P+ K W 
Sbjct: 341 IRHADVRRLLLRQKAFVEGGLALGLYASSLVDDLQTGPEDGREDVHLLLDLLTPLVKSWP 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
            K +   +++A++ +GG+GY  +  +  +YR++  N I  G+      D+L   + + G 
Sbjct: 401 SKYSQEALSDAIQVMGGAGYTRDFPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKITQAGG 460

Query: 463 NLFEQLFSTLEQDLGSS 479
              + L S ++ DL +S
Sbjct: 461 RGLQVLLSRIQADLRAS 477


>gi|163940124|ref|YP_001645008.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163862321|gb|ABY43380.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 569

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 RFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|108798473|ref|YP_638670.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867574|ref|YP_937526.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768892|gb|ABG07614.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693663|gb|ABL90736.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 379

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           LGLTE   G+D+AAI +  ++  D +  L+G K F++S  + D  I+L +   R G    
Sbjct: 124 LGLTEPGAGSDLAAIKTSARRDGDHL-VLNGQKTFITSGATCDLAIVLVRTGERDGRGTT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
              +E+G+P G    R  +KIG R+  T EL F +               FG  + +L  
Sbjct: 183 FVAVENGTP-GFERGRPMHKIGRRAQDTAELFFDDCRVPVSNIIGEPGRGFGCAIANL-- 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I +   ++         +L   + +AR+R   G  L     ++  IA +  
Sbjct: 240 ---PRERLSIAVAAVASARH------ALELGLEHARQRSAFGAPLAQLQSVRMQIAGMHT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI        R   + ++ +  + EAA A       KY   ++   V+   ++  GG GY
Sbjct: 291 DIVVLQEYVDRCVVALNDGELTAAEAAGA-------KYKATELQWEVLDRVLQLFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +EE  IAR +R++    I  G+   M
Sbjct: 344 MEEYPIARMWRDARIQRIYGGANEVM 369


>gi|254497654|ref|ZP_05110436.1| acyl CoA dehydrogenase, short chain specific [Legionella
           drancourtii LLAP12]
 gi|254353128|gb|EET11881.1| acyl CoA dehydrogenase, short chain specific [Legionella
           drancourtii LLAP12]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 48/327 (14%)

Query: 142 LMAQLEAGHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           L  QL  G + + +  S      +++     P +   W PK+ + +             V
Sbjct: 72  LFEQLATGCISTSAYLSIHNMVTTVIDRYAGPELRAKWGPKLTAMD-------------V 118

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255
                LTE   G+D A++ ++  K  D  Y L+G K F+S    SD ++ + +       
Sbjct: 119 LSSYCLTEPESGSDAASLKTKAIKDGD-YYVLNGSKAFISGGSASDVYLCMVRTGDESHH 177

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
            +   L+E  +P GL + +L+ K+G R+  T  L F N              GF +  LN
Sbjct: 178 GISCLLIEKDTP-GLTFGKLEKKMGWRNQPTCMLYFENCRVPIVNRVGDEGIGFKIA-LN 235

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G          ++ A  S+ G    L     Y R R      L D   ++   AD+ 
Sbjct: 236 ALNGG--------RVNIASCSLGGALACLRLTQQYMRERRQFHKPLKDMQALRFYFADML 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D   A  + +R AN+ D    R      A +   + K     +A  +  +AM+  GG G
Sbjct: 288 TDYENARLMVYRAANAMDNNDPR------APMYCAMAKRLATDVAFHISDKAMQLHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ +  I R +R+   + IL G+   M
Sbjct: 342 YLRDYQIERIFRDLRVHQILEGTNEIM 368


>gi|147906709|ref|NP_001080869.1| short-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|33417079|gb|AAH55986.1| Acads protein [Xenopus laevis]
 gi|54311373|gb|AAH84756.1| Acads protein [Xenopus laevis]
          Length = 409

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 18/268 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A ++   K+    + L+G K W  ++  + A ++LA  +  +    +
Sbjct: 149 FALSEPGNGSDAGAASTTA-KLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGI 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    GL   + ++K+G R+++T  L F +     +   N+   P    KI +  
Sbjct: 208 SAFLVEMPTPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRKNLLGQPGMGFKIAMQT 264

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   + + +A     + YA +R   G  +     ++  +AD+AL + +A  L
Sbjct: 265 LDAGRIGIASQALGIGQAAIDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLL 324

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D  K+ S+EAA A++ A        + A  +  +A++ +GG GY+ +    R
Sbjct: 325 TWRAAMLKDNKKTFSKEAAMAKLAA-------SEAATQISHQAIQILGGMGYVTDMPAER 377

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
           HYR++    I  G+     L + N L K
Sbjct: 378 HYRDARITEIYEGTSEIQRLVIANQLLK 405


>gi|322698244|gb|EFY90016.1| acyl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102]
          Length = 447

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 130/300 (43%), Gaps = 35/300 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K W PK+               T+      L+E   G+D  A+ ++ ++ +DG     
Sbjct: 170 LKKKWLPKL--------------ATNTVASFCLSEPVSGSDAFALATRAEETADGFKING 215

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G  W  +S  +  FI+ A ++   G   +   ++E G+P G    + + K+G R+++T  
Sbjct: 216 GKMWITNSKEAGFFIVFANLDPSKGYRGITAFVVEKGTP-GFSIAKKEKKLGIRASSTCV 274

Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-R 340
           L F        N  G        + G + + +I I      +++     S   A+ Y   
Sbjct: 275 LNFDDVVVPKENILGERGHGYKYAIGLLNEGRIGIAAQMTGLALG----SFENAVKYVWN 330

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G ++ +   M+  IA    +IAAA AL +  A   +  +   ++AA A++     
Sbjct: 331 DRRQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGEDFVKDAAMAKL----- 385

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  ++A  V   A+E +GG G++ E    +++R+S   +I  G+ N  +  +  LL+K
Sbjct: 386 --YASQVAGRVAGLAVEWMGGMGFVREGLAEKYWRDSKIGAIYEGTSNIQLNTIAKLLQK 443


>gi|184157715|ref|YP_001846054.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183209309|gb|ACC56707.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+HYA  R   G  + +  +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPISNFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E +I R YR+
Sbjct: 347 EYAIERFYRD 356


>gi|188592155|ref|YP_001796753.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938529|emb|CAP63516.1| PUTATIVE ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 392

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257
             LTE   G+D  A+ +  ++  D  Y L+G K F++ +P++D F + A+ + G  G   
Sbjct: 122 FALTEPEAGSDATALQTTARQDGDH-YVLNGSKCFITNAPIADLFTVFARTDPGTPGAHG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   L+E G+P GL     + K+G   +   ++         L D  V    +   K  +
Sbjct: 181 ISAFLVERGTP-GLSTSEPERKMGQHGSPVGDV--------YLKDCRVPASAIVGGKPNV 231

Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              +A+ +++  R++LA            E + YA +R   G  + D  ++++ IAD   
Sbjct: 232 GFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGQPIADYQLVQQMIADSNT 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA AL    A   D  +  + EA+       + K +  +MA  V   A++  GGSGY
Sbjct: 292 ELHAARALVLETARKRDAGEDVTMEAS-------MCKLFASEMAGRVADRAVQVFGGSGY 344

Query: 425 IEERSIARHYRE 436
           +      R YR+
Sbjct: 345 MARTVAERFYRD 356


>gi|332993290|gb|AEF03345.1| acyl-CoA dehydrogenase-like protein [Alteromonas sp. SN2]
          Length = 600

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 53/339 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A++V         + + PK+ + ++  T             + LTE   G+ +A I
Sbjct: 130 TAAAANVVKHFANEETKQAFLPKMLTGDFTGT-------------MALTEPHAGSGLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261
            +      DG Y + G K ++S+    +SD  +  +LA++ G       +  F+VP  RL
Sbjct: 177 RTSATLHEDGTYRVKGSKLYISAGEHELSDNIVHLVLAKIPGGPAGVKGISLFVVPKYRL 236

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311
            E+G+P   N +    L +K+G R   +  L F    +  G+L+G+    L      + +
Sbjct: 237 DENGNPGPRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLVGEPHQGLRYMFMMMNE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMKRAI----- 359
            +I +   +A++   G R SL  A    + R             +I+   ++R +     
Sbjct: 297 ARIGVGYGAAMIGYRGYRYSLEYAKDRTQGRAAPKLAPEDEATPIINHGDVRRMLLAQKS 356

Query: 360 ---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                +AL +  +T +   L    D AK R+E +    ++ P+ K W  +  P     A+
Sbjct: 357 YCEGGMALCLYGSTLID-ALETEEDTAK-RTEISQLLELLTPVFKAWPSEFGPKANDLAI 414

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + +GG+GY  E  + + +R++  N I  G+     LD+L
Sbjct: 415 QILGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453


>gi|297618236|ref|YP_003703395.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297146073|gb|ADI02830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D +++ +  +K+ D  Y L+G K F++   +++ + + A+    V+G  G  
Sbjct: 125 LTEPNAGSDASSMNTFARKVGDE-YILTGTKCFITHGGIANMYTVFAKTDRSVKGTKGIS 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP     G   GL   ++++K+G+R++   E+ F +       DL    G  E  KI
Sbjct: 184 AFLVP-----GDAPGLSMGKVEDKMGDRASHIAEVIF-DEVRVPARDLLGKEG--EGFKI 235

Query: 315 LIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   MS+    V +A     EA++YA++R   G  +  Q  +   +AD+A +I A
Sbjct: 236 AMQTLDRTRMSIGAAAVGVARRAYEEALNYAKQRVQFGKPIASQQAIAFMLADMATEIEA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL ++ A   D      +  A A++ A         +A  V  +A++ +GG GY++E 
Sbjct: 296 ARALVWKAAWEIDHGNPDPKLGAMAKLYA-------GDVAMKVAVDAVQVLGGYGYMKEY 348

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 349 PVEKLMRDAKILQIYEGT 366


>gi|256379667|ref|YP_003103327.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255923970|gb|ACU39481.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 34/287 (11%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           +W PK+ S E+              +G + ++E   G+D+  IT++ ++  DG Y LSG 
Sbjct: 112 EWLPKLASGEH--------------VGAIAMSEPGAGSDLQGITTRARRDGDG-YVLSGS 156

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+S+   +D  I+ A+ +   G   +  L+ E     G    R+ +K+G +   T EL
Sbjct: 157 KTFISNGAQADLVIVAAKTDPEKGAAGISLLVVEAARAEGFRRGRVLDKLGLKGQDTSEL 216

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F +       LLG      G V+ M+ L    L  A+ SV+G+  +L   + Y ++R  
Sbjct: 217 FFDDVRLPASALLG--GEGQGFVQLMRQLPQERLVIAVSSVAGIEAALELTLDYVKQRSA 274

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYW 403
            G  LI     +  +A+ A +         R+A +F DE              A + K+W
Sbjct: 275 FGRELIKFQNTRFTLAECATEA--------RVARAFVDECVGLHLRGELDVPTAAMAKWW 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +    V+ E ++  GG GY+ E  IAR + ++    I  G+   M
Sbjct: 327 STERLCRVVDECVQLFGGYGYMTEYPIARAWADARVQKIYGGTNEIM 373


>gi|156976709|ref|YP_001447615.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116]
 gi|156528303|gb|ABU73388.1| hypothetical protein VIBHAR_05484 [Vibrio harveyi ATCC BAA-1116]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   +  V   + PK+ + ++                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFASEEVKDAFCPKLITGDF----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  D  Y L+G K F+S    +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 ATKQGDN-YILNGGKTFISGAGDTDVLVVMART-GDAGARGVSAFVVPADADGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D          
Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|87120053|ref|ZP_01075949.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86164755|gb|EAQ66024.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 49/383 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPV-VRKQAHKIRAARLYL--------MA 144
           D+V F     A  R  +    + + WD  SF PV V ++A ++  A LY         ++
Sbjct: 8   DQVAFSDMATAFARSELEP--NAAKWDEESFFPVDVIRKAGEMGFASLYSPESVGGLGLS 65

Query: 145 QLEAGHLMSP-SVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
           +L++  +    S+   S  A +T   +H    W    F++       A    ++ A+G  
Sbjct: 66  RLDSSIIFERLSMGCTSTTAYLT---IHNMVTWMVTSFAKPSVLEKYAESLISAQALGSY 122

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+D A++ +  +K  D  Y L+G K F+S   S   +++    G  G   V  
Sbjct: 123 CLTEPNAGSDAASLKTTAKKEGDH-YILNGSKVFISGAGSTDVLVVMARTGGPGARGVSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++ D   +G+ Y R ++K+G  S  T  + F N              GF+L    +  G 
Sbjct: 182 IVVDAHSDGISYGRKEDKMGWNSQPTRMISFDNVKVPVENLLSEEGEGFVLAMKGLDGGR 241

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +         + A  S+   + +L +A  Y + R   G  + D   ++  +AD+A ++ A
Sbjct: 242 I---------NIASCSLGTAQQALNQARDYMQERKQFGKQIGDFQGLQFRLADMATELLA 292

Query: 369 ATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  L    A+  D   K  +   A A+  A    +  C        EA++  GG GYI+E
Sbjct: 293 ARQLVRLAASKLDLGHKDATTYCAMAKRFATDVGFKVCD-------EALQIFGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + R+ R++  + IL G+   M
Sbjct: 346 YPMERYVRDTRVHRILEGTNEIM 368


>gi|224368717|ref|YP_002602878.1| Acd6 [Desulfobacterium autotrophicum HRM2]
 gi|223691433|gb|ACN14716.1| Acd6 [Desulfobacterium autotrophicum HRM2]
          Length = 600

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 57/370 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+A IT+  +   DG Y L G+K F+S    D        +LA++E      
Sbjct: 163 LTESDAGSDLAGITTMAKDNGDGTYSLEGNKIFISGGEQDLTENIVHPVLARLEDSPAGI 222

Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
             +  FLV   RL  DG+P   N +    ++ K+G   +AT  LE        G LLG+ 
Sbjct: 223 KGISLFLVTKYRLNPDGTPGEFNNVVCTGIEEKMGLHGSATCSLELGGKGQCIGTLLGEK 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGI----------L 349
           N        M +++     ++ + G   + A    A+ YAR+R  S  +          +
Sbjct: 283 NKGMAA---MFLMMNEARQMVGLQGQANASAAYMYALDYARQRIQSKSLTAPAGTPPVAI 339

Query: 350 IDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYARIMAPITKY 402
           I+ P +KR +  +   +    +L +       RLA + D+++ R   +    ++ PI K 
Sbjct: 340 INHPDVKRQLLMMKSWVEGMRSLVYYTGLCHDRLAIAADDSE-RQFYSTLLEVLTPIIKG 398

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LE 459
           +    A  V    ++  GG G+IEE  +++  R+     +  G+     +D++     + 
Sbjct: 399 YITDRAFDVCNHGVQIYGGYGFIEEFPVSQLLRDCRIFMLYEGTNGIQAMDLVGRKLGMH 458

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
           KG   F      +E        K IT  R+   L      + RF T    +A   +A  R
Sbjct: 459 KGEP-FIHFLGLIE--------KTITASREVKGLESLADSMQRFFTNYAEVAHEISA--R 507

Query: 520 AGMNDIADVF 529
           A    + +VF
Sbjct: 508 AASGKVMEVF 517


>gi|281355274|ref|ZP_06241768.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281318154|gb|EFB02174.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 572

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/359 (21%), Positives = 165/359 (45%), Gaps = 50/359 (13%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    +    + + P   S EYD +             + LTE   G+D+ ++  + 
Sbjct: 146 AETINFFGSDEQKEKYLPGFASGEYDGS-------------MDLTEPDFGSDLQSVRLRA 192

Query: 219 -QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLK 276
            Q    G + L+G K F+++  +   ++LA+ E G      +   + +  P  L  +R++
Sbjct: 193 WQDEKTGQWYLNGMKRFITNGCAKVHLVLARSEEGTSDGRGLSMFICEACPQ-LVVRRIE 251

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK+G    AT EL++++    L G      G ++   ++  ++ A +++SG  + +AEA 
Sbjct: 252 NKLGIHGVATTELQYNDVPAVLCGKRRF--GLIK--YVMSLMNGARVAISGQAIGIAEAA 307

Query: 337 HYARRRHVSGGIL----IDQ-PVMKRAIADIALDIAAATALSFRLANSFD---------- 381
           +   R++ +  +     IDQ P +   +A + + + AA AL +      D          
Sbjct: 308 YREARKYAAERMQFKKSIDQFPAIYDMLAGMKVKLTAARALLYETTRVVDLRNGYTHLVE 367

Query: 382 -----EAKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                 A  R+++  Y   A ++ P+ K    +MA  V  +A++  GG+G++++ +  R 
Sbjct: 368 HGENVSADDRAKQKYYNKVAAVLTPMCKALATEMANQVAYDAIQIHGGTGFMKDFNAERF 427

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           YR++   +I  G+    V+  +  ++++  ++  Q  ++L+     +GK  +  LRD++
Sbjct: 428 YRDARITNIYEGTTQLQVVAAIGGVIQRDNDVRIQELASLD----YTGK--LARLRDTV 480


>gi|257066017|ref|YP_003152273.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256797897|gb|ACV28552.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 561

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
           G GLTE+  G+D A   +      D  Y L+G K F++ +P +  +++ A      G   
Sbjct: 122 GFGLTEENAGSDSAGTETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315
           +   + D    G  +    +K+G RS+ T EL F         D+ V    +  E+ K  
Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFK--------DVKVPKENLLGEEGKGF 232

Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363
            Y   A+M + G R+ +A             A  Y   R   G  +         +AD+A
Sbjct: 233 KY---AMMILDGGRIGIASQALGIAQGAYESAKEYGLAREQFGEAIARMQHNSFILADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  L +      D A+ +     Y +  A + K +   MA  + ++A++  GGSG
Sbjct: 290 TELKAARLLIY------DAAQKKDAHVPYGK-DAAMAKLYASDMAEKLTSKALQLYGGSG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           +I+   + R+YR+S    I  G+   M L
Sbjct: 343 FIKGVDVERYYRDSKITQIYEGTNEIMRL 371


>gi|90416082|ref|ZP_01224015.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
 gi|90332456|gb|EAS47653.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
          Length = 582

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 53/343 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250
           + LTE + G+D++A+ ++     D  Y +SG K +++      +D  I L         E
Sbjct: 152 MNLTEPQAGSDLSAVKTKAILNGDH-YLISGQKIYITWGDHSCADNIIHLVLARRPDAPE 210

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           G  G   FLVP+ L   DGS    N +    +++K+G  S+ T  L F +     G+L+G
Sbjct: 211 GNQGISLFLVPKFLVNSDGSLGERNDVKPVGVEHKLGIHSSPTCTLAFGDNGGAVGYLVG 270

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY-----------ARRRHVSG-GI 348
           + N          +   +++A +SV    VSL E  +             R   V G   
Sbjct: 271 EENKGL-----QCMFTMMNNARLSVGHQGVSLGERAYQQAVAYAADRVQGRAAGVEGRAA 325

Query: 349 LIDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYARIMAPITK 401
           +I    +KR +  +        A+S+       R ++  DE + RS+ A    ++ P+ K
Sbjct: 326 IIHHSDVKRMLMQMRALTEGGRAMSYYAIAAEDRSSHHPDE-QVRSQNAQLVELLTPLVK 384

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
            WC +++    +  ++  GG G+IEE   A+H R++    I  G+     LD +    L 
Sbjct: 385 GWCTEVSMESTSLGVQVHGGMGFIEETGAAQHMRDARILPIYEGTNGIQALDFIGRKCLR 444

Query: 460 KGTNLFEQLFSTLE---QDLGSSGKKVITI---LRDSISLCKE 496
            G    + L + ++     L S+   V+ +   LR  I  C+E
Sbjct: 445 DGGQAVQLLLADMQATVDQLASAHGSVVDLRNRLRHGIEQCQE 487


>gi|56963271|ref|YP_175002.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56909514|dbj|BAD64041.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 390

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 37/288 (12%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   P+ K       GLTE   G+D A  T       +G Y L+G K ++++ M
Sbjct: 103 TEEQKQTYLVPLAKGESLGAFGLTEPNAGSD-AGGTQTKAVFENGDYILNGEKCWITNAM 161

Query: 240 SDAFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
               +++  V G       R+  F+VP         G       +K+G R++ T EL   
Sbjct: 162 YAQTVIITAVTGTQSNGKKRISAFIVPT-----DTPGFTITAPYDKMGVRASNTCELVLE 216

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRH 343
           +       LLGD      P +     +Y LD   +S++ + V +A+A     + YA+ R 
Sbjct: 217 DVRVPESNLLGD------PGKGFSQFLYTLDGGRISIAALAVGIAQAAFDRALAYAKERK 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
                +     ++  +AD+A++I  A  +  + A   D      +EAAYA++ A      
Sbjct: 271 QFSKPIGSFQAIQFKLADMAMEIELARNMVHKAAALKDAGAPFGKEAAYAKLFA------ 324

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             +MA     +A++  GG GY+ E  + R  R+  A  + +G G + +
Sbjct: 325 -SEMATRTCNQALQIHGGYGYMREYEVERMLRD--AKLLEIGEGTSEI 369


>gi|308493545|ref|XP_003108962.1| CRE-ACDH-2 protein [Caenorhabditis remanei]
 gi|308247519|gb|EFO91471.1| CRE-ACDH-2 protein [Caenorhabditis remanei]
          Length = 425

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 38/273 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG---- 254
             L+E   G+D  A+ +   K  +  + ++G KW +S +P++D F++LA  E   G    
Sbjct: 149 FALSETVSGSDAFAMKTTATK-DNNDFLINGSKWGISNAPIADFFLVLANAEPEKGYRGI 207

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
            CFL+ R  E     G+      + +G R+  T ++ F+N       ++G+       + 
Sbjct: 208 TCFLIDRDQE-----GVVVGEQDDNLGMRAGTTAQVHFNNVRVPKSSIVGEYGKGCLYLR 262

Query: 311 DMKILIY---------LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
            + I ++         L+++ + +    V LA+      I Y R R   G  LID   ++
Sbjct: 263 IILIFVFIGYKYAIDILNASRILIGAQMVGLAQGCFDQTIPYLRERKQFGSRLIDFQGLQ 322

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEA 415
             IA +  +I AA  + +  A        R ++  +  + A  + KY+  ++A       
Sbjct: 323 HQIAKVGTEIEAARLMVYNSA--------RMKDCGFPFVKAASMAKYYAPEVACKTTKMC 374

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +E +GG G+ +E S  + YR++    I  G+ N
Sbjct: 375 IEWLGGRGFTKEFSAEKFYRDAVVGGIYEGTSN 407


>gi|291220761|ref|XP_002730394.1| PREDICTED: short-chain acyl-CoA dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 417

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 37/285 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++   ++ +  + L+G K W  +   ++A ++ A  +       +
Sbjct: 154 FGLSEPGNGSDAGAASTTA-RLENDQWVLNGTKAWITNGFEAEAAVVFATTDKSLKHKGI 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+ P+ +E     GL   + ++K+G R+++T  L + +       LLG+      P  
Sbjct: 213 SAFITPKPME-----GLSLGKKEDKLGIRASSTTYLIYEDAKIPKDHLLGE------PGF 261

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI ++ LD   + ++   + +A+     A+ YA +R   G  +     ++  +AD+  
Sbjct: 262 GFKIAMMTLDDGRIGIASQALGIAQASLECAVEYALKRESFGRPIAKLQAIQMKLADMET 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L+++ A   D  K  ++E+A A++ A     +C         +A++ +GG GY
Sbjct: 322 RLESARLLTWKAAMLKDAGKPYTKESAMAKLAASEAATFCAH-------QAIQVLGGMGY 374

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           + E    RHYR++    I  G+     L +   L K    F+QL 
Sbjct: 375 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLIK---QFQQLI 416


>gi|241766354|ref|ZP_04764239.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363501|gb|EER58959.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 396

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 21/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 132 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPEMGARGV 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E G P     Q+L +K+G R + T EL F+N       +LG LN+        K+
Sbjct: 191 TAFLIEKGMPGFSIAQKL-DKLGMRGSHTGELVFNNVEVPAANVLGGLNMGA------KV 243

Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A
Sbjct: 244 LMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQA 303

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             + ++ +A + D   +  +     R        WC + A  +  E ++  GG+GYI E 
Sbjct: 304 GRSFAYTVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQVFGGNGYINEY 361

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 362 PLGRLWRDAKLYEIGAGT 379


>gi|304310681|ref|YP_003810279.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796414|emb|CBL44622.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 379

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 23/260 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF 256
           + + +TE   G+D+ AI ++ +      Y L+G K F+S+  +SD  I+ A+    V   
Sbjct: 125 LAIAMTEPSTGSDLQAIKTRLED-KGSHYILNGAKTFISNGILSDLVIVAAKAPEGVTLV 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V R + DG   G    R   K+G +S  T EL F N     +   NV   P +    L+
Sbjct: 184 VVERGM-DGFKRG----RRLEKMGLKSQDTAELFFENV---TIPKANVLGAPGQGFVYLM 235

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  AI +V+  + + +E + Y + R   G  +      +  +A++  ++    
Sbjct: 236 QKLAQERLVCAIGAVATAQFAFSETLKYVKERTAFGKPIGTFQNTRFGLAEMRTEVTIGQ 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                L    +  +  SEEA  A       K+WC  M   V+ + ++  GG GY+ E  I
Sbjct: 296 NFVDTLVMKLNAGQISSEEACMA-------KWWCTDMVNRVVDKGVQFHGGYGYMLEYPI 348

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR Y ++    I  G+   M
Sbjct: 349 ARAYVDARIQPIFAGTNEIM 368


>gi|226364603|ref|YP_002782385.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243092|dbj|BAH53440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 12/255 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ AI++      D +  L+G K F+S+ M +D  I+ A+ +   G   V
Sbjct: 131 IAMTEPGAGSDLGAISTTAVVDGDDL-VLNGTKIFISNGMLADFVIVAAKTDPAAGKKGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ +   +G        K+G  +  T EL F +     G +LG+ N   G +      
Sbjct: 190 SLLVVEAGMDGFTRNGPLPKVGLSAQDTAELVFDDVRVPRGNVLGEPNAGFGYLRHNLPQ 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ S++ MR +  +A+ Y   R   G  + D    +  +A++A +I  A   + R
Sbjct: 250 ERLSVAVTSMASMRRTFDQALTYICDRTAFGRRVADFQANRFYLAELATEIEIAQCFTDR 309

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D A    +E     + A + K+W  ++   V+  A++  GG GY+ E  +A+ Y 
Sbjct: 310 CI--LDAAHGTLDE-----VTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYDVAQDYL 362

Query: 436 ESPANSILLGSGNAM 450
           +     I  G+   M
Sbjct: 363 DCRGGPIYAGTTEIM 377


>gi|187779164|ref|ZP_02995637.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC
           15579]
 gi|187772789|gb|EDU36591.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC
           15579]
          Length = 377

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ K       GLTE   G+D  A   Q   + +G  Y L+G K F++ +P+ D  I+ A
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDHYILNGRKTFITNAPICDFAIVTA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E   G   +   + +   +G      +NK+G R   T +L F N     +   N+   
Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  LD   + V+   + +A     EA+ Y + R   G  L      +  IAD
Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAVKYVKERVQFGRPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++++  I R YR++   SI  G+
Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363


>gi|71064718|ref|YP_263445.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71037703|gb|AAZ18011.1| probable acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 606

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 37/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  + S+     DG Y LSG K F+SS   D       I+LA++    EG 
Sbjct: 165 LTEPQCGTDLGQVKSKAIPQDDGSYKLSGTKIFISSGEHDLTENIIHIVLARLPDAPEGT 224

Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L +     G  NG+    +++K+G  S+AT  L F +  G+L+G+ N  
Sbjct: 225 RGISLFIVPKFLPNAEGNIGERNGVSCGSIEHKMGINSSATCVLNFDDAVGYLIGEPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352
              +        + + I  ++   +S   A+ YA+ R              V+  I+   
Sbjct: 285 LKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLSGTKEPEKVADAIIHHA 344

Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
            V +  +   A      + +  S R A+   +     ++  + +         PI K + 
Sbjct: 345 DVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEKWDDKLGFYTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            ++         +  GG GYI+E  +    R++   ++  G+     LD+L
Sbjct: 405 TELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTGIQALDLL 455


>gi|328705939|ref|XP_001952480.2| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 412

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 46/266 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D +A++++  K     Y ++G K W  +   S   ++ A  +       + C
Sbjct: 154 LSEPGLGSDASAVSTKATKKGSN-YIINGTKSWTTNGFESKGLVLFASTDKSKKHKGISC 212

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
           FL+ +        G    + ++K+G R ++T  L F        N  G L    N +   
Sbjct: 213 FLLKKTFP-----GFFVGKKEDKLGIRGSSTCGLVFEDCPVPEENVLGELGKGFNYA--- 264

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +I LD+  + V+     +A+A     + YA +R+  G  +    +++  IAD+A
Sbjct: 265 ------MITLDAGRIGVAAQACGIAQASLELAVDYASKRNSFGVPIAKLQLIQNKIADMA 318

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---G 420
           L + +A  L++R A+  D   S S+EAA A++ A          + A    A +CI   G
Sbjct: 319 LRVESARLLTWRAAHLKDSNASHSKEAAMAKLAA----------SEAATYNAHQCIQVLG 368

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ +    R+YR++    I  G+
Sbjct: 369 GMGYVSDMPAERYYRDARITEIYEGT 394


>gi|154253338|ref|YP_001414162.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157288|gb|ABS64505.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 379

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 43/384 (11%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGL--HCSIWDR-SFEPVVR-KQAHKIRAARLYL------ 142
           R+D  E   A+  + R    D L  H + WDR +F PV   ++A  +  A +Y+      
Sbjct: 2   RFDLTEEQQAFQDVARNFATDELAPHAADWDRDAFFPVATMRKAAALGFAGIYVREDVGG 61

Query: 143 --MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIG 199
             + +L+A  +        +  A   +      W    F  E       P +    +   
Sbjct: 62  SALTRLDAALIFEALSEGCTSTAAFMSIHNMASWMIDRFGNEEQRQKWLPRLTPMDLIAS 121

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D AA+ ++  +  D  Y L+G K F+S +  SD ++ + +  G  G   V
Sbjct: 122 YCLTEPSSGSDAAALKTKAVRDGDH-YVLNGSKAFISGAGTSDLYVCMVRT-GEAGAKGV 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306
             ++ +    G+ +   + K+G  S  T ++ F +              GF +  + +  
Sbjct: 180 SCIVVEKDTPGVSFGAPERKMGWNSQPTAQVIFEDARVPVANRIGEEGEGFKIAMMGLDG 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G          L+    S+   R +L  A  Y   R   G  L     ++  +AD+A ++
Sbjct: 240 G---------RLNIGACSLGTARAALKRAKDYLGEREQFGKKLAQFQALQFKLADMATEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +  + A   D       +A  A + A + K +   +   VI EA++  GG GY++
Sbjct: 291 EAARLMIMQAATKVDA------KAPDATMHAAMAKRFATDVGFNVINEALQIHGGYGYLK 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  + RH R++  + IL G+   M
Sbjct: 345 DFPLERHLRDARVHQILEGTNEIM 368


>gi|194205574|ref|XP_001491178.2| PREDICTED: similar to Short/branched chain specific acyl-CoA
           dehydrogenase, mitochondrial precursor (SBCAD) (2-methyl
           branched chain acyl-CoA dehydrogenase) (2-MEBCAD)
           (2-methylbutyryl-coenzyme A dehydrogenase)
           (2-methylbutyryl-CoA dehydrogenase) [Equus caballus]
          Length = 494

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++  K  D  + ++G K W   +  +  F+++A V+   G     C
Sbjct: 238 LSEAGAGSDSFSLKTRADKKGD-YFVINGSKMWISHAEYAGLFLVMANVDPTRGYKGITC 296

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     GL   + +NK+G R++ T  L F N     + + NV        K  
Sbjct: 297 FLVDRGTE-----GLHIGKPENKLGLRASCTCPLTFDNV---KVPEANVLGQIGHGYKYA 348

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  L D   ++  +A +A  + AA
Sbjct: 349 IGMLNKGRVGIAAQMLGLAQGCFDYTIPYIKERVQFGTRLFDFQGLQHQVAHVATQLEAA 408

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ ++ +GG+GY++   
Sbjct: 409 RLLTYNAARLAEAGRPFIKEASMA-------KYYASEIAGRTTSKCIDWMGGAGYVKAYP 461

Query: 430 IARHYRESPANSILLGSGN 448
           + +++R++   +I  G+ N
Sbjct: 462 VEKYFRDAKIGTIYEGTSN 480


>gi|153938986|ref|YP_001391489.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152934882|gb|ABS40380.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|295319513|gb|ADF99890.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           230613]
          Length = 377

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D  A  +      D  Y L+G K F++ +P+ D  I+ A 
Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGAGETTAVLEGD-YYILNGRKTFITNAPICDFAIVTAM 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E   G   +   + +   +G      +NK+G R   T +L F N     +   N+    
Sbjct: 170 TEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGKE 226

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI L  LD   + V+   + +A     EAI Y + R   G  L      +  IAD+
Sbjct: 227 GKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L +  A   D   +   E+A A       KY+  ++A  V  +A++  GG 
Sbjct: 287 ETKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGY 339

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G++++  I R YR++   SI  G+
Sbjct: 340 GFMKDYPIERMYRDARITSIYEGT 363


>gi|108763214|ref|YP_628693.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108467094|gb|ABF92279.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 604

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 150/325 (46%), Gaps = 49/325 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++ +++SD ++ + G K F++   S MS+  I  +LA+ EG     
Sbjct: 167 LTEPDAGSDVGAARTKARRVSDDVWEIEGVKRFITNGDSDMSENIIHMVLARPEGAAPGT 226

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
             +  F+VP+  + EDGS    NG+   +L+ K+G + + T E+ F +     G LLG++
Sbjct: 227 KGLSLFVVPKYWVNEDGSLGEANGVVCTKLEKKMGLKGSVTCEMTFGDGKPCRGLLLGEV 286

Query: 303 NVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
           +     +  M  +I    +   + S++ +      A+ +++ R + G  L+         
Sbjct: 287 HDG---IRQMFYIIEQARMAVGVKSMATLSAGYGRALAFSKDR-LQGADLMQARDKTAPR 342

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAA----YARIMAP 398
                 P ++R +           AL    A   D    +   R+ EA        ++ P
Sbjct: 343 VPIFRHPDVRRMLMAQKAHAEGMRALCLYTAFIQDGVERKGGHRATEAGELDTLNDMLLP 402

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           + K +C + A  ++A +++  GGSGY+++  + ++ R+   +++  G+ +   LD+L   
Sbjct: 403 LVKGYCSEKAYELLALSLQVHGGSGYLQDYPVEQYIRDQKIDTLYEGTTHIQALDLLMRK 462

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGK 481
           +   G    + L S + +    +G+
Sbjct: 463 VARDGGATLQGLLSQIRETAERTGE 487


>gi|325921333|ref|ZP_08183191.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325548191|gb|EGD19187.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 416

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 157 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 216

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 217 TAFMVDADRAGFHRGKTEPKLGIRASATCEIEFADYIAQPDEVLGVEG---EGFKTAMSV 273

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 274 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 333

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 334 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 386

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 387 YFRDAKITEIYEGT 400


>gi|229109774|ref|ZP_04239359.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228673619|gb|EEL28878.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|242790071|ref|XP_002481490.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718078|gb|EED17498.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 433

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E       +
Sbjct: 167 LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 225

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +P G    R  +K+G R + T EL F + F     LLG+LN        +K+L
Sbjct: 226 SAFIVEKTPKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 279

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R      +    +++  +AD+   +AA+
Sbjct: 280 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHIRKQFNTPIAHNQLIQGKLADMYTKLAAS 339

Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A ++  A S DE+ +       R+++ A A + A      C         +A++ +GG+
Sbjct: 340 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 392

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI E +  R  R++    I  G+
Sbjct: 393 GYINEIAAGRLLRDAKLYEIGAGT 416


>gi|16554489|ref|NP_444213.1| Acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169235992|ref|YP_001689192.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167727058|emb|CAP13843.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 381

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 123/274 (44%), Gaps = 35/274 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+      +G  ++E   G+D+A++++  +K  D  + + G+K W  +  + D F++L +
Sbjct: 112 PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGDE-WIIDGNKMWITNGSVGDYFVVLCR 170

Query: 249 VE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGF 297
            +    GR   F   +++ +   +G   +++  K+G R++ T EL          N  G 
Sbjct: 171 TDPDASGRYEGF--SQIVVESDRDGFTAEKITGKLGIRASDTAELVLDAVRVPEENLIGT 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             G           ++++ + D    +V+   V +A      A+ YA+ R   G  + D 
Sbjct: 229 RGGGF---------LQLMQFFDETRTTVAAQGVGIARGATERALAYAQEREQFGQPVADF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A++     AA  L+ + A S D    +         +A + K +  ++A  V 
Sbjct: 280 QAIQHKLAEMQTKTEAARTLTRKSAWSVDHRDDQ------LTALASMAKSFASRIAVEVA 333

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            EA++  GG+GY+ +  + R YR++    +  G+
Sbjct: 334 DEAVQIHGGAGYVNDFDVERFYRDAKITQLYEGT 367


>gi|148265337|ref|YP_001232043.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398837|gb|ABQ27470.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 24/300 (8%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   V +    +V  +W  +   R Y P     + +  +     LTE   G+D A I
Sbjct: 82  SVRTTVSVQVSLVEQVIFNWGSEAQRRSYLPG----LCRGEILGCFALTEPGVGSDAAGI 137

Query: 215 TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K W  +  ++D  I+ A+     G   +   + D    G    
Sbjct: 138 GATATPHGDG-WLLNGTKNWITNGGVADIAIVFARTGPAAGNKGISAFIVDTKSPGFSSL 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGD-LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
            ++ K+G R+++T  L F +   FL GD L   TG    +KI L  LD+    V+   V 
Sbjct: 197 EIRGKLGLRASSTAALTFRDC--FLPGDALLGETGA--GLKIALSALDNGRYGVAAGCVG 252

Query: 332 LAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + +      + YARRR   G  +    +++  IA +A+D+AAA  L FR     +   + 
Sbjct: 253 IIQGCVDACVAYARRRQQFGRSIASFQLVQDMIARMAVDLAAARLLVFRAGELKNRGAAN 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S E + A       KY+  + A     +A++  G  GY     + R+ R++   +I  G+
Sbjct: 313 SLETSMA-------KYFASEAAVRAATDAIQVHGAYGYSNAHPVERYLRDAKVATIYEGT 365


>gi|88798868|ref|ZP_01114450.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88778348|gb|EAR09541.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 588

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 142/339 (41%), Gaps = 45/339 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + P++T+ + ++L+T    H        S +   T   PM +   +  + LTE   GTD+
Sbjct: 126 LYPALTAGACLSLLT----HG-------SEDLKQTYLPPMYEGRWSGSMCLTEPHCGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260
             + ++     DG Y ++G K F++    D       ++LA++         +  FLVP+
Sbjct: 175 GIMKTKAVPKGDGSYDITGTKIFITGGEHDLNENIIHLVLAKLPDAPAGPKGISLFLVPK 234

Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           ++  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N     +  M   
Sbjct: 235 IMVNDDGSLGDRNAVRCGSIEHKMGIKASATCVMNFDGATGYLIGEENRGLAAMFTMMNY 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ---PVM-----------KR 357
             L   +  +    VS   A  YA    + R  +G +  DQ   P++           +R
Sbjct: 295 ERLSIGLQGIGLGEVSYQSARAYALDRIQSRAPTGAVNPDQAADPIIVHPDVRRMLLTQR 354

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A  +     AA   +   +A   D+A+ +    A   ++ P+ K +             +
Sbjct: 355 AYNEGGRAFAAYVGMWLDVAKGSDDAEQKKTAEAMVALLTPVAKAYFTDRGLDATILGQQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ E  + +  R++    I  G+     LD++ 
Sbjct: 415 VFGGHGYVREWGMEQFVRDARIAQIYEGTNGIQALDLMG 453


>gi|229044080|ref|ZP_04191767.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228725251|gb|EEL76521.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|27374207|gb|AAO00971.1| CG4703-PA [Drosophila erecta]
          Length = 238

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 114/233 (48%), Gaps = 27/233 (11%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  ++  ++A I+ A    +     +  F+VP+     +  G    + ++K+
Sbjct: 3   FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPK-----ATKGFSLGKKEDKL 57

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA--- 335
           G R ++T +L F +    ++   N+   P    KI +  LD+  + ++G  + + +A   
Sbjct: 58  GIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALE 114

Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + YA++R   G  +     +++ IAD++L + +A  L++R A   D+ +  ++EAA A
Sbjct: 115 LAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMA 174

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ A      C         + ++ +GG GY+ + +  RHYR++    I  G+
Sbjct: 175 KLAASEAATLCSH-------QCIQILGGMGYVTDMAAERHYRDARITEIYEGT 220


>gi|88796987|ref|ZP_01112577.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea
           sp. MED297]
 gi|88779856|gb|EAR11041.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea
           sp. MED297]
          Length = 381

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE   G+D AA+ ++  + S G + L+G K F+++  ++D  I+ A  +   G+ G   
Sbjct: 124 LTEPHAGSDAAALKTRAVRTSTG-WRLNGTKQFITNGAIADLAIVFAVTDPDKGKKGLSA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGP 308
           FLVP  L      G     +++K+G R++ T +L F +       LLG       ++ G 
Sbjct: 183 FLVPAHLP-----GFEVPVVESKMGQRASDTAQLVFKDIELPEDALLGAEGQGYAIALGN 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I      M+ +   V    A  YA+ R   G  L+D   +   +AD+   I A
Sbjct: 238 LEGGRIGIAAQCVGMAQAAFDV----AASYAQERESFGTRLMDHQAVAFRLADMDTQIEA 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A   D       EAA A++ A         MA  V+++AM+ +GG GY+ + 
Sbjct: 294 ARQLVWNAARRKDAGLPALREAAMAKLFA-------SDMAEKVVSDAMQTLGGYGYLTDF 346

Query: 429 SIARHYRESPANSILLGSGN 448
            I + YR+     I  G+ +
Sbjct: 347 PIEQIYRDVRVARIYEGTSD 366


>gi|313898664|ref|ZP_07832199.1| rubredoxin [Clostridium sp. HGF2]
 gi|312956548|gb|EFR38181.1| rubredoxin [Clostridium sp. HGF2]
          Length = 634

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D AA T     +    Y L+G K F+++   +D +++ A     +G   +
Sbjct: 123 FGLTEVNAGSD-AAGTETTAVLEGDYYILNGGKIFITNADKADTYVVFASTNPEMGTRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI- 314
              + +   +G  +    +K+G RS++T EL F++       LLG L       +  KI 
Sbjct: 182 SAFIVEKGWDGFTFGDHYDKMGIRSSSTAELIFNDVKVPKENLLGKLG------QGFKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + +A+     A+ YA+ R   G  +  Q V+   +AD+A  +  A
Sbjct: 236 MATLDGGRIGIAAQALGIAQGAYENALEYAKERVQFGKPIAQQQVISFKLADMATKLRCA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A    E K   E       MA   K +   +A  +  +A++  GGSGY++   
Sbjct: 296 RMLIYSSA----ELKENHEPYGMESAMA---KQYASDVALEICNDALQIFGGSGYLKGME 348

Query: 430 IARHYRESPANSILLGS 446
           + R YR++   +I  G+
Sbjct: 349 VERAYRDAKITTIYEGT 365


>gi|187922781|ref|YP_001894423.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713975|gb|ACD15199.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 396

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    + +K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLEEDGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                  +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  IARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364


>gi|111222047|ref|YP_712841.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111149579|emb|CAJ61272.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 380

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 44/310 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           AS +  MTT    + W P   + E             +   + ++E   G+D+A + +  
Sbjct: 96  ASYLVDMTTDEQKERWLPGFVNGE-------------LITAIAMSEPGAGSDLAGVKTSA 142

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQR 274
           ++  D  Y ++G K F+S+ + SD  + + + +   GR G  L+   +E G   G    R
Sbjct: 143 RRAGDH-YVVNGSKTFISNGLLSDLVVTVVKTDPAAGRKGISLLA--IERGM-EGFERGR 198

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSV 325
             +KIG +S  T EL F+        L+G+ N      +S  P E + I      AI +V
Sbjct: 199 NLDKIGQKSADTAELVFNEVKVPVENLIGEENRGFYHLMSNLPAERLGI------AINAV 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           S  R ++     YA  R   G  +    V + AIA++++ +        R   + +  + 
Sbjct: 253 SQARRAVELTKQYASDRSAFGQPIGTFQVNRHAIAEMSVKVDVMQTYVDRCIEAVNAGEL 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EAA A       KYW  +    ++   ++  GG GY+ E  IAR +R+S     L G
Sbjct: 313 TAAEAAGA-------KYWATETQWEILDRCLQLHGGYGYMNEYEIARLWRDSRVQR-LYG 364

Query: 446 SGNAMVLDVL 455
             N ++ D++
Sbjct: 365 GTNEIMKDLI 374


>gi|319943206|ref|ZP_08017489.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743748|gb|EFV96152.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 395

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 116 FGTEEQKQKYLPKLATGELIGCFGLTEPNHGSDPGSMVTRARKVEGG-YSLSGAKTWITN 174

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG++  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                   ++    GP         L+SA   ++   +  AEA + A R++       ++
Sbjct: 230 VPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEACYEAARQYTLDRKQFNR 283

Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           P     ++++ +AD+A +I+       R+    DE  +  E       +  I K   C  
Sbjct: 284 PLAANQLIQKKLADMATEISLGLQAVLRVGRMKDEGIAPVE-------VTSIVKRNSCGK 336

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 337 ALDIARMARDMLGGNGISDEYPVARH 362


>gi|253582720|ref|ZP_04859940.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           varium ATCC 27725]
 gi|251835296|gb|EES63837.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           varium ATCC 27725]
          Length = 375

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 39/272 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ K       G TE + GT + A+ + G+      Y ++G K  +++ + ++ F++ A+
Sbjct: 113 PLAKGEKIGAFGWTEAQAGTRVTAVLN-GEN-----YVINGKKVLITNALEAEIFVVFAK 166

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                 E  +  F++ +  E     G      ++K+G R ++T EL F +       +LG
Sbjct: 167 TDMEKAENNISAFIIEKGTE-----GFSIGEPEDKMGVRGSSTCELIFEDCIVPKNNMLG 221

Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPV 354
            +       E  KI +  L+   + V+   + LA     EAI Y + R V+G  +     
Sbjct: 222 KVG------EGFKIAMSTLNGGRIGVAAQAIGLAQGALDEAIKYIKEREVNGKKVSQFQN 275

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  IAD+   I AA  L ++ A+     K R EE  Y   +A ++K+   ++A     +
Sbjct: 276 TQFLIADLQTRIDAARLLVYKAAD----MKDRGEEYGY---LASMSKFLASEIAMKTTEK 328

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG+GY+++  + R  R++    I  G+
Sbjct: 329 AVQLFGGNGYLKKYPVERMMRDAKVTEIYEGT 360


>gi|212544852|ref|XP_002152580.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|212544854|ref|XP_002152581.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065549|gb|EEA19643.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065550|gb|EEA19644.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  ++ A++E  G++ 
Sbjct: 78  FGLTEPNHGSDPGSMETVAREHPTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIK 137

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FL+ R      P  L    +KNK   R++ T  ++  N       +L D    +GP   
Sbjct: 138 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPVENMLPDAEGLSGP--- 192

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G+  +L ++I  AR     R+   G  L    ++++ +AD + D
Sbjct: 193 ---FTCLNSARLGIAFGVTGALEDSISRAREYALDRKQFRGNPLAKYQLIQKKLADASTD 249

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   D  KS  E       M  + K   C  A A      E  GG+   
Sbjct: 250 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 302

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 303 DEYHIGRH 310


>gi|166711615|ref|ZP_02242822.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 597

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 58/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348
              P + ++ I   +++A +SV    + L+E     A+ Y R R  S  +          
Sbjct: 282 ---PHKGLQAIFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338

Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
             +I  P ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIMHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESEQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 459 ASQAAGLKLFLTDVETFANAQDGSAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|119192250|ref|XP_001246731.1| glutaryl-CoA dehydrogenase [Coccidioides immitis RS]
          Length = 429

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y L+G K W  +SP+SD F++ A++E  G++ 
Sbjct: 165 FGLTEPNHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIK 224

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R  +   P  L    +KNK   R++ T  ++  N       +L D+    GP   
Sbjct: 225 GFIVQR--DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP--- 279

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D
Sbjct: 280 ---FTCLNSARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKKLADAATD 336

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   DE K   E       M  + K   C  A        E  GG+   
Sbjct: 337 AAYGTLAAVQVARLKDEGKCTPE-------MISMIKRQNCDRALVGARTLQEVFGGNAAS 389

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 390 DEYHIGRH 397


>gi|90420133|ref|ZP_01228041.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335467|gb|EAS49217.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 598

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 144/327 (44%), Gaps = 52/327 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D++A+ ++ ++  DG Y + G K +++      +D  + L         A
Sbjct: 160 MNLTEPQAGSDLSALKTKAERADDGSYRIFGQKIYITYGEHDFTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNAT---------VELEFS 292
            V+G +  FLVP+ L  +DGS     +  C+  +++K+G   + T         V+ E +
Sbjct: 220 GVKG-ISLFLVPKFLVNQDGSLGRRNDAFCHS-VEHKLGIHGSPTCTMIYGDGSVDGEEA 277

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------- 344
              G+L+G+ N     +  M     L   +  +     +  +A+ YAR R          
Sbjct: 278 GAVGYLIGEENRGLACMFTMMNNARLLVGVQGIGVAEAAFQKALDYARERRQGRATRLAK 337

Query: 345 ---SGGIL---IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------- 391
              +GG +   +D P + R +  +     A  A+++   ++ D AK+   +A        
Sbjct: 338 NPEAGGQMSPILDHPDVARMLLTMKSLTGAVRAITYACGHATDMAKAHRGDAEASAAWKE 397

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A ++ PI K +   +   V +  ++  GG G++EE   AR  R++    I  G+     
Sbjct: 398 RANLLTPIAKAFSTDVGVEVASLGIQVHGGMGFVEETGAARLLRDARIAPIYEGTNGIQA 457

Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDL 476
           +D++   + + G     + F+ L++ +
Sbjct: 458 IDLVARKIGQSGGEAVRRYFAELDETI 484


>gi|320538366|ref|ZP_08038242.1| rubredoxin [Treponema phagedenis F0421]
 gi|320144781|gb|EFW36521.1| rubredoxin [Treponema phagedenis F0421]
          Length = 643

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     +    Y L+G K F++ +P++D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLQGDHYILNGGKIFITNAPVADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWQGFEFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A     EA+  A+ R   G  +     +   +AD+
Sbjct: 229 GQGFKIAMATLDGGRIGIAAQALGIAQGAYEEALEQAKEREQFGNPIGVHQGISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A   +  +S S E+A A++       +   +   V+ +A++  GGS
Sbjct: 289 ATKLRAARFLIYSAAELKENHESYSMESAMAKM-------YASDICLEVVNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+++   + R YR++   +I  G+
Sbjct: 342 GFLKGMQVERAYRDAKITTIYEGT 365


>gi|313122484|ref|YP_004038371.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312296828|gb|ADQ69424.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 379

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 42/265 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GR----VGC 255
           ++E   G+D+A+I ++ ++  D  Y L+G K W  +  ++D  +++A+   G     +  
Sbjct: 124 ISEPAHGSDVASIETRAEEDGDE-YVLNGTKMWITNGTIADVAVVMAKTTPGERHRGITA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
           FLVP  L     +G    ++ NK+G R++   E+        +L D+ V   P E++   
Sbjct: 183 FLVPTDL-----DGFETTKISNKLGIRASDLAEV--------VLDDVRV---PAENVIGA 226

Query: 313 ------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
                 +++ +      SV+   V + +A       YA  R   G  + +   +   +A+
Sbjct: 227 VDQGFYQLMTFFAGGRTSVAAQAVGVGQAAVDAATDYANEREQGGQKIHEYQAVSHKLAE 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA +L++R A   ++   ++     A   A + K +  + A  V  E ++  GG
Sbjct: 287 MATNIEAARSLTYRAATHVEDGDDQT-----AAKFASMAKLFASEQAVDVADEGIQVHGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +G++ +    R YR++    I  G+
Sbjct: 342 AGFVTDHPAERFYRDARITKIYEGT 366


>gi|148652993|ref|YP_001280086.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572077|gb|ABQ94136.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 383

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 37/295 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    K W PK+ + EY              +G + +TE   G+D+ AI +   K  D  
Sbjct: 107 TQEQKKAWIPKLATGEY--------------VGAIAMTEPTTGSDLQAIKTYAVKEGDD- 151

Query: 226 YCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           Y ++G K F+++      I+LA    + +G  G  L+  ++E     G    R   K G 
Sbjct: 152 YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLI--VVETDGLEGFERGRNLKKTGL 209

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEA 335
            +  T EL FSN       LLG +    G ++ M+ L   +  I+++SG   ++++L   
Sbjct: 210 SAQDTSELFFSNVRVPQNNLLGSIE-GLGFIQMMQELPQ-ERLIIALSGCGAIKLALELT 267

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y ++R   G  +      +  +A++  D  A  AL      +  E K  + +A+    
Sbjct: 268 LDYVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVEAMIEGKLTAPQAS---- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              + KYW  +    VI E ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 324 ---LIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADARVQKIYGGTNEIM 375


>gi|30020420|ref|NP_832051.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228939490|ref|ZP_04102078.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972343|ref|ZP_04132954.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978956|ref|ZP_04139321.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|229127729|ref|ZP_04256718.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|29895971|gb|AAP09252.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228655806|gb|EEL11655.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228780738|gb|EEM28951.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228787360|gb|EEM35328.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820190|gb|EEM66227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326940036|gb|AEA15932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|260437184|ref|ZP_05791000.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876]
 gi|292810497|gb|EFF69702.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 27/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVE------G 251
            GLTE   GTD   +  Q + + DG  + L+G K F+++   +D +I++A  +      G
Sbjct: 123 FGLTEPGAGTDAQGV--QTKAVLDGDEWVLNGSKCFITNGKYADVYIIIAVTDVVEDKKG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R        ++E G+P G  +   + K+G R +AT EL F +     +   N+     + 
Sbjct: 181 RKKKLFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDC---RIPKENLLGQQGKG 236

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
             I ++ LD   + ++   + +AE      I Y + R   G  +  Q   +  +AD+A  
Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALETTIDYVKERKQFGRSIAQQQNTQFVLADLATK 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L ++ A +    K  S EAA A++ A        ++A  V  + ++  GG GYI
Sbjct: 297 VEAAQLLVYKAACTKMTQKVYSVEAAKAKLFA-------AEVAMEVTTKCVQLHGGYGYI 349

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++    I  G+
Sbjct: 350 REYDVERMMRDAKITEIYEGT 370


>gi|226954433|ref|ZP_03824897.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834782|gb|EEH67165.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 595

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/411 (20%), Positives = 173/411 (42%), Gaps = 57/411 (13%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           L+ P ++  + +AL +  +    + + PKI+S E+  T             + LTE   G
Sbjct: 127 LLYPLLSVGAGMALNSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAG 173

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257
           TD+  I ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+
Sbjct: 174 TDLGIIKTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFI 233

Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L  +DGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M
Sbjct: 234 VPKYLVNDDGSLGERNPVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVM 293

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIA 360
                L   I  +     +   A  YA    + R  +G    ++P         ++R + 
Sbjct: 294 MNYERLSMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLL 353

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAE 414
           ++  +  A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +
Sbjct: 354 NVRANNEASRAFAVYVGQQLDITKFSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLD 413

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL 472
           A    GG GYI E  + +  R+     I  G+      D++   +++ G     +  + +
Sbjct: 414 AQMVFGGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI 473

Query: 473 EQDLGSSGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
            +D  ++    +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 474 -RDFANTLDADLNFIKDATLDAATEIEAVTQFIIEQAAENVEFPNSAAVDY 523


>gi|228958605|ref|ZP_04120323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801026|gb|EEM47925.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|229087834|ref|ZP_04219948.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228695470|gb|EEL48341.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 379

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYIVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ A+  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATNVEASRLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|218235650|ref|YP_002367035.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218163607|gb|ACK63599.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|239501461|ref|ZP_04660771.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 378

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    AN  D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 AHQLVLHAANLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVNDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|120555756|ref|YP_960107.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325605|gb|ABM19920.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 600

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+ +A I +     +DG Y + G K ++S            ++LA+++G   
Sbjct: 162 MALTEPHAGSSLADIRTSATPTADGHYLIKGAKIYISGGEQSITENIVHMVLAKIKGAPA 221

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F+VP+    E+G+P   NG+    L +K+G R   +  L F +     G+L+G
Sbjct: 222 GVKGISLFIVPKFHVDENGNPGDRNGVSLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVG 281

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349
           +    L      + + +I +   +A++   G   SL  A    + R  S          +
Sbjct: 282 EPHQGLKYMFQMMNEARIGVGFGAAVIGYRGYMHSLEYAKDRLQGRKASEKNPESPQVPI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYW 403
           ID   ++R +           AL    A   D+       + R E      ++ P+ K W
Sbjct: 342 IDHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAW 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             +  P     A++  GG+GY  E  + + +R++  N I  G+     LD+L
Sbjct: 402 PSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453


>gi|296502892|ref|YP_003664592.1| acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|296323944|gb|ADH06872.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478
             + R YR++  + I  G+     L V  +L K     EQL  T +E D+ +
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|229190414|ref|ZP_04317414.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228593027|gb|EEK50846.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 569

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478
             + R YR++  + I  G+     L V  +L K     EQL  T +E D+ +
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|218289139|ref|ZP_03493375.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240722|gb|EED07901.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 593

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 47/275 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +   DG  Y L+G K F+++   +D F++ A+V+G+    F+V
Sbjct: 148 LTEPSSGSDALGAKTTAKLSEDGKYYILNGTKQFITNAGFADVFVVYAKVDGQHFSAFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +      G+ +   + K+G + ++T ++        +L D+ V   PVE++   +  
Sbjct: 208 ERTMP-----GVSFGPEEQKMGIKGSSTRQV--------ILEDVKV---PVENLLFEVGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               ++ G +++L  +  YA  R   G  L + P+++R +A +  
Sbjct: 252 GHQIAFNILNIGRFKLGAGALGGSKIALETSAKYANERKQFGKKLSEFPLIQRKLARMNT 311

Query: 365 DIAAATALSFRLANSFDE-------------AKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            I A  ++ +R A   D               +S    A YA I   I K +  ++   V
Sbjct: 312 QIYALESVVYRTAGLLDAILETVDVTKPDAGVQSAKAIAEYA-IECSINKVFGSEVLDFV 370

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EA++  GG G+I+E  + + YR+S  N I  G+
Sbjct: 371 VDEAVQIHGGYGFIKEYGVEQMYRDSRINRIFEGT 405


>gi|309779692|ref|ZP_07674451.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921633|gb|EFP67271.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 385

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 29/273 (10%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           D+ P+I S E             + I   LTE   G+D A++ ++     D  Y ++G K
Sbjct: 108 DYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATPDGDH-YVINGTK 153

Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +++ +P + AF ++A+  G  G   +  L+      G+   +   K+G R   T ++  
Sbjct: 154 RYITNAPRAGAFTLMARTGGE-GAGGISALIVPADTPGITLGKPDKKMGQRGTKTCDVML 212

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
            N       ++G +    G    MK+L   D   + +S +   +A     +A+ YA+ R 
Sbjct: 213 DNVRVPAANIIGGV-AGQGFKTAMKVL---DRGRLHISALACGMAHRLITDAVAYAKERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   ++     ++A   K +
Sbjct: 269 QFGQPIADFQLIQAMLADSQTELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASCAKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           C +M   V   A++  GG+GYI E    R YR+
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360


>gi|113868775|ref|YP_727264.1| glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527551|emb|CAJ93896.1| Glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 397

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYELTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A+++G  G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLQGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
             + + N+  G          L+SA   ++   +  AE     A  Y   R   G  L  
Sbjct: 233 --VPEENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAA 290

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 TQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365


>gi|167032850|ref|YP_001668081.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859338|gb|ABY97745.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 375

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKARARLDGDH-YVLTGSKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    ++  L 
Sbjct: 170 TDPDAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVVNRLG 224

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 E  KI L  L+   + ++   V +A A       YA  R   G  LI+   +  
Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V ++A++
Sbjct: 282 RLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+ +  + R YR+     I  G+ +
Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|332875584|ref|ZP_08443396.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|332736157|gb|EGJ67172.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 375

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERMTFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|187918900|ref|YP_001887931.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717338|gb|ACD18561.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 381

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   GTD++ I +   +  DG + LSG K W  ++P++D   +LA+ +   G   +  
Sbjct: 122 ITEADAGTDVSGIRTTAMRTPDG-WELSGAKLWIHNAPVADVAFVLARTDPAAGRRGMSI 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + D +  G+     ++K+G R++   EL F      L  D  +         ++  LD 
Sbjct: 181 FIVDCALAGVSKGAKEHKMGQRASQVGELHFDRV--KLPQDALLGQEGRGFHIMMSVLDK 238

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++ + V +A+     A+ YA+ R   G  + +   ++  +AD+A DI AA  L   
Sbjct: 239 GRVGIAALAVGIAQAGLEAALDYAQTRKQFGSHIAEFQGIQWMLADMATDIQAARLL--- 295

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 +A  R E    A I   + K +    A    A A++  GGSGYI    + R YR
Sbjct: 296 ----VHDAAERLEAGERASIACSMAKCFAGDTAVKHSANAVQIFGGSGYIRGYEVERLYR 351

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 352 DAKITQIYEGT 362


>gi|307596317|ref|YP_003902634.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307551518|gb|ADN51583.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 401

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 36/293 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +         TE   GTDI  +++  ++  D  + L G K F++ +P +   ++LAQ
Sbjct: 120 PVYRGETTFFGAYTEPEHGTDITQLSTVAERKGDK-FILRGVKTFITNAPTAKYGVVLAQ 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------------- 294
            +           +      G+  ++L  K+G R++   E+   N               
Sbjct: 179 TDPEKKHRGQTLFIIHTDWPGVQIRKLSGKMGQRASPVGEITLDNVEVPIDYVVGGEKGI 238

Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F + L   NVS            L  A +++  M  +  +A+ YA++R   G  +I+
Sbjct: 239 NQGFYWTLAYFNVSR-----------LGPAAIALGIMLAAFDKALEYAQKRAQFGQPIIN 287

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT---KYWCCKMA 408
             +++  +A +A+ I  + ++ +R A   D   S  +     R MA IT   K +    A
Sbjct: 288 FQLIQEKLARMAMLIEVSRSMLYRAAYYVD---SYIKFQIDPRAMAAITSAAKVFITDAA 344

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             VI EA++  GG GY EE  + R++R+     I  G+    +L + + L +G
Sbjct: 345 NQVIDEAIQIHGGYGYFEEFDVERYWRDHRVTRIYEGTNEINLLTITDALRRG 397


>gi|315506020|ref|YP_004084907.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315412639|gb|ADU10756.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E +GG+D AA+T++  +  D  Y ++G K W   + ++D + +  +  G  G   +  
Sbjct: 126 LSEPQGGSDAAALTTRAVRDGDA-YVVTGTKAWITHARVADFYNIFCRTGG-PGPKGISC 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
           LL D S  G+  Q  +  +G  ++   ++ F +     +    +  G      I +  LD
Sbjct: 184 LLADRSTAGIHPQAAERTMGLHASPIAQIAFDDA---RVPAERLIGGEGAGFTIAMSALD 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           S  + ++   V LA+     A+ YAR R   G  +ID   +   +AD A  I+AA AL+ 
Sbjct: 241 SGRLGIAACAVGLAQGALDYAVGYARERRQFGRAIIDFQGLGFNLADAATQISAARALTL 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  ++ S EAA A++ A         +A  V  +A++ +GG+GY+ +  + R+ 
Sbjct: 301 AAARLRDAGRAYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYM 353

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           RE+    I+ G+     L +   L KG
Sbjct: 354 REAKVLQIVEGTNQIQRLVISRALAKG 380


>gi|269962592|ref|ZP_06176939.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832705|gb|EEZ86817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 384

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA      V   + PK+ + E+                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFANEEVKDAFCPKLITGEF----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  +  Y L+G K F+S    +D  +++A+  G  G   V   +     +G+ Y R +
Sbjct: 140 ATKQGEN-YILNGGKTFISGAGDTDVLVVMART-GDAGAKGVSAFVVPADADGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPVSHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D          
Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|229150554|ref|ZP_04278769.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228632863|gb|EEK89477.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478
             + R YR++  + I  G+     L V  +L K     EQL  T +E D+ +
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|169826132|ref|YP_001696290.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus
           C3-41]
 gi|168990620|gb|ACA38160.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus
           C3-41]
          Length = 594

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 156/363 (42%), Gaps = 59/363 (16%)

Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           S+T  + V + + P V        K + PK+ S E             +     LTE   
Sbjct: 109 SITHGAHVGIGSLPIVLFGDENQKKKYLPKLASGE-------------LIAAYALTEPGS 155

Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264
           G+D + A T+     +   Y L+G K W  ++  +D F++ A+++G +   F+V R    
Sbjct: 156 GSDALGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFSAFIVERTF-- 213

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319
              NG+     + K+G +S++T  L   +       LLG+  +  G V    IL      
Sbjct: 214 ---NGVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHVIAFNILNIGRYK 268

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + ++ G + +   A+ Y  +R      L D  + K  ++ +A  + A+ +L++R    
Sbjct: 269 LGVGTIGGSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASHLYASESLNYRTVGL 328

Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           F++  S+   EE    +++A           I K +  +    +  EA++  GG G++ E
Sbjct: 329 FEDRLSQLSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388

Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475
             + R YR+S  N I  G+   N M++            L LL+   NL ++L   + +D
Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPED 448

Query: 476 LGS 478
           +G+
Sbjct: 449 IGT 451


>gi|319761394|ref|YP_004125331.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115955|gb|ADU98443.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 598

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL+   T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALLAHGTDAQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+  + ++ +  +DG Y ++G+K F+S+   D       ++LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPQADGTYRITGNKIFISAGEHDVAANIVHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G+ N +    L++K+G   NAT ++      G ++G+ N     +  M 
Sbjct: 235 PKFHVNADGSLGARNPIYCTGLEHKMGIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG---------GILIDQPVMK---- 356
               L     S+    V+   A+ YA+ R     +SG          I++   V K    
Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLT 354

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +A A+ A  +     L    A+   + K R        ++ PI K +            
Sbjct: 355 AKAYAEGARALQIYCTLLLDKAHHHPDEKERKGCDELVALLTPIVKAFITDNGHIATNAC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M+  GG G+I+E  + +  R++  N I  G+     LD+L
Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLL 454


>gi|240167759|ref|ZP_04746418.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 54/312 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++ + +             V     LTE   G+D +A+ ++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRLATMD-------------VIASYCLTEPDAGSDASALGTRA 139

Query: 219 -QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            Q  SD  Y L G K F+S +  SD ++++A+        +   ++E G+  GL +  L+
Sbjct: 140 VQHGSD--YVLDGVKQFISGAGASDVYVVMARTGADGPRGISAFVIEKGTA-GLSFGALE 196

Query: 277 NKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIYLD 319
            K+G  +  T ++                      FG  +  LN              L+
Sbjct: 197 EKMGWHAQPTAQVILDGVRVPADAMLGGADGEGAGFGIAMNGLNGGR-----------LN 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+ G + +  +A  Y R RH  G  L+D+P ++  +AD+A  +  +  L +R A++
Sbjct: 246 IAACSLGGAQAAFDKAGVYVRERHAFGASLLDEPTVRFTLADMATGLETSRMLLWRAASA 305

Query: 380 FD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D +A  + E  A A+     T   C ++A     +A++  GG GY+ E  + +  R+  
Sbjct: 306 LDCDAADKVELCAMAKRYVTDT---CFEVAD----KALQLHGGYGYLREYGLEKIVRDLR 358

Query: 439 ANSILLGSGNAM 450
            + IL G+   M
Sbjct: 359 VHRILEGTNEIM 370


>gi|228908102|ref|ZP_04071950.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228851520|gb|EEM96326.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPVENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|205375297|ref|ZP_03228087.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
 gi|205375428|ref|ZP_03228217.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 35/287 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  +   D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAQGEKIGAYGLTEPGSGSDAGGMRTTARLEGDH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
            +      G    F+V    E     G    + + K+G RS+ T E+ F         +L
Sbjct: 172 TDSEKKQRGGTTAFIVESGFE-----GFSVGKKEKKLGIRSSPTTEIIFEECKVPKENML 226

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
           G+L       E  KI ++ LD     ++   V +A     E+I YA+ R   G  +  Q 
Sbjct: 227 GNLG------EGFKIAMMTLDGGRNGIAAQAVGIAQGALDESIRYAKEREQFGKPIASQQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   IAD+A  I A+  L+++ A    E     +E+A +++MA  T       A  V  
Sbjct: 281 GISFKIADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLMAGDT-------AMNVTT 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++  GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 334 DAVQIFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 380


>gi|197122597|ref|YP_002134548.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172446|gb|ACG73419.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 40/280 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253
             LTE   G+D A + +   +  D  Y L G K F+++ P +DA ++ A  +       +
Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181

Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             FLVP   R    G P+        +K+G R++ +  L F        + LG+      
Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCALPARYRLGEEG---- 229

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++G  + +A A       YA+ R   G  +     ++  +AD
Sbjct: 230 --DGFKIAMGTLDGGRIGIAGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA  L  R A++ D     S E+A A++ A        +M+  V ++A++  GG
Sbjct: 288 MATEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GY++E  + RH+R+S    I  G+     L +   + KG
Sbjct: 341 YGYVKEFDVERHWRDSRITEIYEGTSEIQRLVISASVLKG 380


>gi|90417198|ref|ZP_01225125.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [marine gamma proteobacterium HTCC2207]
 gi|90330974|gb|EAS46235.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [marine gamma proteobacterium HTCC2207]
          Length = 599

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 60/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A I ++ +   DG Y L+G K ++S    D       ++LA++ G     
Sbjct: 163 LSEPQAGSSLADIRTKAEPKPDGSYALTGTKMWISGGEQDITENIVHMVLAKIPGSPPGV 222

Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
             +  FLVP  R+ +DG+    N +    L +K+G R      L F  +    G+L+G+ 
Sbjct: 223 KGISLFLVPKNRVNDDGTIGEYNNIALAGLNHKMGCRGATNCLLNFGESGESIGYLVGEP 282

Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354
           N     +  M    +I + + + + ++ G   SL     YAR R     ++   P     
Sbjct: 283 NQGLANMFHMMNEARISVGMSAVMSALGGYLYSL----DYARNRPQGRPLVNRNPEDPQI 338

Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITK 401
                  +KR +      I  A  L +  A   D  K  ++  A         ++ PI K
Sbjct: 339 MISEHADIKRMLMTQKAFIEGAQTLMYYCAELIDTKKLSTDLEANQRRDLLLDLLTPICK 398

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            W  +        A++ +GG GY  E  + R YR++  N I  G+     +D+L    + 
Sbjct: 399 SWPSEFCLEANKLAIQILGGYGYTREYPVERLYRDNRLNHIHEGTWGIQGIDILGRKVRM 458

Query: 462 TN------LFEQLFSTLEQDLGSSG--------KKVITILRDSISLCK--EDKGLA 501
            N      L E++ +T++   G +G         + + ++ D+IS+ +  ED  LA
Sbjct: 459 QNGAAVKILREEMQATIDSAAGHAGLSSFCDQLNEYLVLIEDTISVVEQAEDPSLA 514


>gi|327440911|dbj|BAK17276.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 46/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
            GLTE   G+D A  T     + +G + ++G K F+++      + L  +  R G     
Sbjct: 123 FGLTEPNAGSD-AGGTETTAVLDNGEFVINGSKVFITNASYAKHLALTAITNRDGNKKEI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312
              +VP         G   +    K+G        L  SNT   ++ ++ V   P E++ 
Sbjct: 182 SAIIVPT-----DAKGFTIKSEYEKMG--------LNASNTTELIIENVRV---PEENLL 225

Query: 313 --------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
                   + L  LD   + ++ M V +A+     A+ YA+ R   G  L D    +  +
Sbjct: 226 GIRGNGFKQFLTTLDGGRIGIAAMAVGIAQGALNKAVQYAKERKQFGKALADFQATQFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + I  A    ++ A   D+ +   +EAA       I KY+  +MA  V  EA++  
Sbjct: 286 ADMEVKIQLARTFVYKAAWLKDQGRPFGKEAA-------IAKYYASEMAMEVCDEAIQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG GY++E  + R  R+  A  + +G G + V
Sbjct: 339 GGYGYMKEYEVERFLRD--AKLLEIGEGTSEV 368


>gi|70732972|ref|YP_262745.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347271|gb|AAY94877.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 601

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G  N +    L++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFLPNADGSVGQRNAVSCGSLEHKMGIHGNATCVMNFDAATGFLIGPANKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        L +A+  ++   +     + YAR R              +   +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +        A+ +  A   D      + + + +  A    M PI K +  ++
Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEV 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                   ++  GG G+I E  + ++ R+S  + +  G+     LD+L 
Sbjct: 405 GFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453


>gi|73539142|ref|YP_299509.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72122479|gb|AAZ64665.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----R 252
           I   LTE   G+D A++ ++ +   D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGPGASG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N       ++G +    G  
Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENARVPAANIIGGVP-GVGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A+ YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYAKERKQFGKPIGDFQLIQGMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK   +      ++A  TK +C +M   +   A++  GG+GY
Sbjct: 290 ELYAGLSMMRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRIADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E    R YR+
Sbjct: 349 IAEYKAERFYRD 360


>gi|330823264|ref|YP_004386567.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308636|gb|AEB83051.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 598

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 49/340 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL+   T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALLAHGTDAQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258
           D+  + ++ +  +DG Y ++G+K F+S+   D       ++LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPQADGTYRITGNKIFISAGEHDVAANIVHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G+ N +    L++K+G   NAT ++      G ++G+ N     +  M 
Sbjct: 235 PKFHVNADGSLGARNPIYCTGLEHKMGIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG---------GILIDQPVMK---- 356
               L     S+    V+   A+ YA+ R     +SG          I++   V K    
Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLT 354

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            +A A+ A  +     L    A+   + K R        ++ PI K +            
Sbjct: 355 AKAYAEGARALQIYCTLLLDKAHHHPDEKERKGCDELVALLTPIVKAFITDNGHIATNAC 414

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M+  GG G+I+E  + +  R++  N I  G+     LD+L
Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLL 454


>gi|195998421|ref|XP_002109079.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens]
 gi|190589855|gb|EDV29877.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens]
          Length = 420

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 32/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A + Q + + DG  Y ++G K W  ++  +D ++++A      G     
Sbjct: 163 LSEPDSGSD--AFSLQTRAVPDGDDYVINGRKLWITNAEKADLYLIMANAAPEQGYKGIT 220

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELE-----FSNTFGFLLGDLNVSTG 307
           CF+V    + G+P GL   R + K+G    SN  V L+      SN  G + G   +   
Sbjct: 221 CFIV----DAGTP-GLSVPRNEQKMGLNIVSNCPVMLDDVRVPASNIIGNVGGGYKIMAN 275

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + D +I I    A   + G +  L  AI Y   R   G  L D   M+  IA   +++ 
Sbjct: 276 ALTDGRIGI----AAQVIGGAQGVLDIAIPYVMERKQFGKRLFDFQAMQHQIAQATVEVT 331

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A   D+     +EA+ A       KY+  ++A  V  + ++ +G  GY++E
Sbjct: 332 AARLLYYNAAKLLDQKLPSVKEASMA-------KYFATEVACQVCIQGIKWLGALGYMKE 384

Query: 428 RSIARHYRESPANSILLGSGN 448
             + +  R+  A +I  G+ N
Sbjct: 385 MPVEKFLRDLVAATIYEGTSN 405


>gi|85709790|ref|ZP_01040855.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1]
 gi|85688500|gb|EAQ28504.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1]
          Length = 593

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 157/358 (43%), Gaps = 67/358 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQVE 250
           + LTE   G+D+ A+ S  + I++G     Y ++G K +++     +++  I  +LA++ 
Sbjct: 175 MNLTEPAAGSDVGALRSTAEPITEGEHAGKYRIAGQKIYITWGDHQLAENIIHLVLARLP 234

Query: 251 GR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           G       +  F+VP+  + +DGS    N L    L++K+G  ++ T  + + +     G
Sbjct: 235 GAPEGSRGISLFVVPKYHVNDDGSLGPHNDLRPVSLEHKLGIHASPTCVMSYGDNGECIG 294

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348
            L+G  N        M +   +++A ++V    V + E     AI YA  R  S      
Sbjct: 295 ELVGQENRGL-----MAMFTMMNNARINVGNQGVQIGERATQQAIAYATDRVQSARAGSP 349

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARI 395
                 +I+ P ++R I  +      A AL +  A   D       +AK+RSE      I
Sbjct: 350 DKNPVAIIEHPDVRRMILRMKALTEGARALLYYCAGQVDRGTIGNADAKNRSE------I 403

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K W   +   V    ++  GG G++EE   A+H+R++    I  G+      D++
Sbjct: 404 LVPLLKAWGTDIGVEVAGIGVQVHGGMGFVEETGAAQHWRDARIAPIYEGTNGIQAADLV 463

Query: 456 NL---LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
                LE G  +   LF  + +D G              +L K+   +AR++ ++ +L
Sbjct: 464 TRKLGLEGGEAMI-ALFEEIARDAGDEAGLA--------ALAKDCADIARWMQDEASL 512


>gi|109896984|ref|YP_660239.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109699265|gb|ABG39185.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 586

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 51/328 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK+ S E+  T             + LTE   GTD+AA+ ++    +D  Y
Sbjct: 146 SEHLQQSYLPKMLSGEWPGT-------------MNLTEPDAGTDLAAVKTKAVP-NDDHY 191

Query: 227 CLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPR--LLEDGSP----N 268
            ++G K +++     M+D  + L         A V+G +  F+VP+  L E+G+P    +
Sbjct: 192 LITGQKIYITWGDHQMTDNIVHLVLARLPDAPAGVKG-ISLFIVPKFNLDENGAPAERND 250

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             C   L++K+G   + T  + F +  G   +L+G+ +     +  M         +  +
Sbjct: 251 AYCV-SLEHKMGIHGSPTCVMSFGDNGGAKGYLVGEAHKGLSYMFTMMNHARQGVGLQGL 309

Query: 326 SGMRVSLAEAIHYARRR------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +    S   A+ YA+ R        S   ++  P ++R +  +     A  AL    A  
Sbjct: 310 AISEASYQHALGYAKERLQGTNKDGSRFTIMKFPDVRRMLMQMKSSTEAMRALCLVAAAE 369

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D         A + +  PI K WC +++  +     +  GG G+IEE   A+ YR++  
Sbjct: 370 IDRGN-----GARSELFTPIVKGWCTELSQELTYLGTQIHGGMGFIEETGSAQFYRDARI 424

Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464
            +I  G+     LD++    L+ KG  L
Sbjct: 425 LTIYEGTTGVQALDLVGRKTLVNKGEAL 452


>gi|330829884|ref|YP_004392836.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565]
 gi|328805020|gb|AEB50219.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 125/256 (48%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    ++  D  + L+G+K W  + P +D F++ A+ +   G   +
Sbjct: 121 LAMSEPGAGSDVVSMRLTAEREGDH-FVLNGNKMWITNGPDADTFVIYAKTDTSAGPKGI 179

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVE 310
              ++E G+P     Q+L +K+G R ++T EL F N         G L G + V    ++
Sbjct: 180 SAFIVEAGTPGFSTAQKL-DKLGMRGSSTCELVFDNCRVPQENLLGTLHGGVKVLMSGLD 238

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++    A   +  M+  +   + Y R R   G  + +  +++  +AD+   +A++ 
Sbjct: 239 YERVVL----AAGPLGIMQACMDVVLPYVRERKQFGQAIGEFQLVQGKLADMYTRLASSR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL + +A++ D+  +  ++ A A + A        + A  +  +A++ +GG+GYI E   
Sbjct: 295 ALVYSVASACDQGHTSRKDCAAAILFA-------AENATQMALDAIQLLGGNGYINEYPT 347

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 348 GRLLRDAKLYEIGAGT 363


>gi|313110252|ref|ZP_07796148.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310882650|gb|EFQ41244.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 596

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLI 449


>gi|84687629|ref|ZP_01015504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664419|gb|EAQ10908.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal
           [Rhodobacterales bacterium HTCC2654]
          Length = 369

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 35/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254
           L+E   G+D++AI +  ++  DG + L+G+K ++S+ +     ++A    R       + 
Sbjct: 113 LSEPHCGSDVSAIRTSAERKGDG-WVLNGYKTYVSNGIKAGQAVVAAYTDRSKGAKDGIS 171

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP         G     +   +G+ +    EL F +       +L       E+ K 
Sbjct: 172 LFLVP-----ADAPGYKLAGILELMGHHTPGVAELAFDDV------ELPADALIGEEGKG 220

Query: 315 LIYL----DSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           L YL    ++  ++++G       ++L EA  YAR R   GG L D   ++  +AD+A +
Sbjct: 221 LSYLMHGLNAGRLAIAGTSLGMGEMALEEARLYARERPAFGGKLSDFQAVQHMLADMATE 280

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A  +D  +        +R +  + K +C + A   +  A++  GG+GY+
Sbjct: 281 MRAARLLMLDAAWRYDRGE-------VSRSLCAMAKLFCSEAAGRTVDTALQIFGGAGYV 333

Query: 426 EERSIARHYRESPANSILLGS 446
             + + R YR+     I  G+
Sbjct: 334 RGQRVERLYRDVRVTRIYEGA 354


>gi|229083243|ref|ZP_04215617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228700049|gb|EEL52661.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQL  T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427


>gi|300778163|ref|ZP_07088021.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503673|gb|EFK34813.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 430

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 20/254 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLV 258
           GLTE   G+D   +++   +  D  + ++G K F++  +S    ++    G  G      
Sbjct: 175 GLTEHNTGSDSGGMSTTAVRDGDE-WIINGAKNFITHAISGDIAVVMTRTGEKGAKNNST 233

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G P G    + +NK+G R++ T EL F N        LG+  V  G  + MK+L
Sbjct: 234 AFVLEKGMP-GFTSGKKENKLGMRASETAELIFDNVRVPDSHRLGE--VGEGFKQAMKVL 290

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A +S+   R +   A+ YA+ RH  G  + D   +   +AD+A +I AA  L 
Sbjct: 291 DGGRISIAALSLGTARGAYKAALKYAKERHQFGKPIADFQAINFMLADMATEIDAAELLI 350

Query: 374 FRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            R A++   AK + ++E A A++ A      C +++      A++  GG GY ++    +
Sbjct: 351 QR-ASTLKNAKQKMTKEGAMAKLYASEA---CVRISN----NAVQIFGGYGYTKDFPAEK 402

Query: 433 HYRESPANSILLGS 446
            YR+S   +I  G+
Sbjct: 403 FYRDSKLCTIGEGT 416


>gi|166711522|ref|ZP_02242729.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 382

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++   +L     V     E  +  +  
Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + ++   EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|54024145|ref|YP_118387.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015653|dbj|BAD57023.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 382

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 37/295 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             V   L +TE   G+D+ AI ++  +  D  Y
Sbjct: 106 TEEQKRTWLPRLCSGE-------------VVGALAMTEPGTGSDLQAIRTRAVREGDD-Y 151

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            ++G K F+++   +D  I++A+     +G  G  L+  L+E   P G    R  +KIG 
Sbjct: 152 VINGAKTFITNGGQADLVIVVAKTGAIADGAAGTSLI--LMETDRP-GFRRGRRLDKIGQ 208

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAI 336
           R   T EL F +     G LLG+ +   G V+ M+ L      I+  SV  M  +LA+ I
Sbjct: 209 RGQDTSELFFDDVRVPVGNLLGE-SEGQGFVQLMQQLPQERLIILVGSVVAMETALAQTI 267

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARI 395
            Y++ R   G  L      K  +A++A +         R+A  F D+  ++         
Sbjct: 268 SYSKERQAFGKPLFAFQNTKFTLAEVATET--------RIARVFLDDCITKHIRGELDVP 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              + K+W  +     + E ++  GG GY+ E  I+R + +     I  G+   M
Sbjct: 320 TVAMAKWWITERTMVALDECLQLHGGYGYMTEYPISRAWVDHRVQKIYAGTNEIM 374


>gi|89092373|ref|ZP_01165327.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083461|gb|EAR62679.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 18/272 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  ++  D  Y L+G K F+S   S D  +++A+  G  G   +  
Sbjct: 124 LTEPNAGSDAASLKTTARREGDN-YILNGSKIFISGAGSTDVLVVMART-GEDGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316
              D    G+ Y R ++K+G  S  T  + F +       LLG  N   G    MK L  
Sbjct: 182 FAVDAKAEGIVYGRKEDKMGWNSQPTRMITFEDVVVPASALLG--NEGDGFKIAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S+   + +L  A  Y   R   G  L +   ++  +AD+A ++ AA  +   
Sbjct: 240 GRINIATCSIGTAQAALNRARDYMHERKQFGKELANFQALQFKLADMATELVAARQMVRM 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D   +  ++ AY      + K +   +   V  EA++  GG+GYI+E  + R+ R
Sbjct: 300 AAAKLD--ANHPDKTAYC----AMAKRFATDVGFNVADEALQIFGGNGYIKEYPMERYIR 353

Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
           ++  + IL G+   M + V    L+E   +L 
Sbjct: 354 DNRVHRILEGTNEIMRVIVARRVLMEDAADLL 385


>gi|328881353|emb|CCA54592.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 47/304 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   +    ++W P++ S E              A+G  GLTE   G+D   + ++
Sbjct: 95  AKTVAAWGSEEQKREWLPRLASGE--------------ALGCFGLTEPGTGSDAGNLATR 140

Query: 218 G-QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             +    G Y ++G K F+++   +D  ++ A+     G   V   L      GL  + +
Sbjct: 141 AVRDGGSGDYVINGSKMFITNGTWADVVLLFARTNDTPGHRGVSAFLVPADTPGLTRRAV 200

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAI----MSVSG 327
             K+G R  AT EL        +L D+ V      GP  + K      SA+    MSV+ 
Sbjct: 201 HGKLGLRGQATAEL--------VLEDVRVPAAALLGP--EGKGFTVAMSALAKGRMSVAA 250

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D 
Sbjct: 251 GCVGIAQAALDAAVRYAGEREQFGKPIASYQLVQELISDIAVDVDAARLLTWRVADLIDR 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +  A+ A       K +  + A      A++  GG GYI+E  + +  R++   ++
Sbjct: 311 GQDFATAASKA-------KLYASEAAVRAANNALQVFGGYGYIDEYPVGKLLRDARVMTL 363

Query: 443 LLGS 446
             G+
Sbjct: 364 YEGT 367


>gi|328881069|emb|CCA54308.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 392

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255
           L+E   G+D AA+ ++  +  DG  + + G K W     ++D   ++A+  G     V  
Sbjct: 133 LSEPHAGSDAAALRTRAVRDGDGGDWVIDGTKAWITHGGIADFCTVMARTGGAGARGVTA 192

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP     G   GL     + K+G + + T +L F    G  + D        +   I 
Sbjct: 193 FLVP-----GDAPGLSAAPPERKMGMKGSPTAQLHFD---GVRVPDERRLGAEGQGFAIA 244

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDS  + ++   V L      EA+ YA+ R   G  + D   ++  +AD+A  + A 
Sbjct: 245 LDALDSGRLGIAACAVGLGQAALDEAVGYAKERRQFGRPIADFQGLRFLLADMATQVEAG 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL    A   DE +     AA A       K +C   A  +  +A++ +GG GY  +  
Sbjct: 305 RALYLEAARLRDEGRPFGRCAAMA-------KLFCTDAAMRITTDAVQVLGGYGYTADFP 357

Query: 430 IARHYRESPANSILLGS 446
           + R+ RE+    I+ G+
Sbjct: 358 VERYLREAKMLQIVEGT 374


>gi|91793296|ref|YP_562947.1| butyryl-CoA dehydrogenase [Shewanella denitrificans OS217]
 gi|91715298|gb|ABE55224.1| Butyryl-CoA dehydrogenase [Shewanella denitrificans OS217]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 29/298 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    TP + K W+  + + +             +     LTE   G+D A++  Q + 
Sbjct: 96  MITTWGTPALRKTWSEGLTTGQ-------------LLASYCLTEPGAGSDAASL--QTKA 140

Query: 221 ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + DG  Y L+G K F+S   +   +++    G  G   +  +      +G+ Y + ++K+
Sbjct: 141 VRDGEHYVLNGSKVFISGAGATEMLVVMCRTGEAGAKGISAIAVPADLDGIIYGKAEDKM 200

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAE 334
           G  +  T ++ F N       LLG+     G    MK L    ++ A  SV   + +L  
Sbjct: 201 GWNAQPTRQITFDNVRVPVDHLLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQAALER 258

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L     ++  +AD+A ++ AA  +  RLA +F       E  AY  
Sbjct: 259 ATQYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLDNQDPEATAYC- 315

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               + K +   +  +V   A++  GG GYI E  + RH+R+   + IL G+   M L
Sbjct: 316 ---AMAKRFATDIGFSVCDSALQIHGGYGYIREYPLERHFRDVRVHQILEGTNEIMRL 370


>gi|290961905|ref|YP_003493087.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651431|emb|CBG74553.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257
           L+E   G+D A++ ++  +  D         W     ++D + ++A+  G     +  FL
Sbjct: 142 LSEPASGSDAASLRTKAVREGDEWVITGTKSWITHGGVADFYTVMARTGGEGSRGITAFL 201

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T +L F    G  +GD        +   I L 
Sbjct: 202 VP-----GDAEGLSAAAPEKKMGMKGSPTAQLNFD---GVRVGDARRLGEEGQGFAIALS 253

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A    A  A
Sbjct: 254 ALDSGRLGIAACAVGVAQAALDEAVAYATGRQQFGRPISDFQGLRFMLADMATQTEAGRA 313

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S++AA A+++       C   A  V  +A++ +GG GY  +    
Sbjct: 314 LYLSAARLRDAGRPFSKQAAMAKLL-------CTDAAMRVTTDAVQILGGYGYTADFPAE 366

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I+ G+
Sbjct: 367 RYMREAKVLQIVEGT 381


>gi|258651208|ref|YP_003200364.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554433|gb|ACV77375.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 390

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 46/265 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+ +  ++  D  Y L+G K W      +D ++++A+  + R G   FL
Sbjct: 127 LSEAQAGSDPAALRTTARRDGD-EYVLNGAKAWTTHGGHADFYLVMARTSDERTGISSFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIG--NRSNATVELEFSNTFGFLLGDLNVSTGPVE----- 310
           VP         GL     + K+G    + ATV LE +               PVE     
Sbjct: 186 VP-----ADTAGLIADPPERKMGLTGSATATVRLEQARV-------------PVERRIGA 227

Query: 311 ---DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
               ++I L  LDS  + ++ +   LA+     A+ YAR R   G  +ID   +   +AD
Sbjct: 228 EGEGLRIALAALDSGRLGIAAVATGLAQGALDRAVAYARERQTFGQAIIDHQGLGFLLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   +  A A+    A   D+    S EAA A+++A          A  V  +A++ +GG
Sbjct: 288 MEAAVQTARAMYLHAARLRDQGLPFSREAAIAKLVA-------TDNAMKVTTDAVQVLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           SGY  +  + R+ RE+    I  G+
Sbjct: 341 SGYTRDFPVERYMREAKVMQIFEGT 365


>gi|118465062|ref|YP_883553.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           104]
 gi|118166349|gb|ABK67246.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           104]
          Length = 386

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 36/367 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGH 150
           WD  E  P    +LR S   G+  +I+ R  E V      ++   R++    +A      
Sbjct: 30  WDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIADPTTAA 84

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +S     A M+    TP   K W P++ + +             V     LTE   G+D
Sbjct: 85  FLSIHNMCAWMIDSYGTPEQRKGWVPRLAAMD-------------VIASYCLTEPGAGSD 131

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            AA++++  +   G Y L G K F+S +  SD ++++A+  G     +   ++E GS  G
Sbjct: 132 AAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEKGSA-G 189

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIM 323
           L +   + K+G  +  T ++            L  + G      I +       L+ A  
Sbjct: 190 LSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRLNIAAC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A + D  
Sbjct: 250 SLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAGALDAD 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E      +  + K +       V  +A++  GG GY+ E  + +  R+   + IL
Sbjct: 310 DPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLRVHRIL 363

Query: 444 LGSGNAM 450
            G+   M
Sbjct: 364 EGTNEIM 370


>gi|108763116|ref|YP_631979.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108466996|gb|ABF92181.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
            GLTE   G+D AA  +   +  D  Y ++G K W  + P +DA +++       G    
Sbjct: 123 FGLTEPEAGSDAAAQKTVAVRKGDE-YVINGSKNWITNGPKADAIVLMTMTNKEAGHKGI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+VP      +P G        K+G  +  +  + F +      ++LG         E
Sbjct: 182 TAFMVP----TDTP-GFIRAEPDKKMGISAAWSCSMFFEDMRVPAKYMLGKEG------E 230

Query: 311 DMKILI-YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++       R +  EA+ Y+  R   G  + +   ++  IAD+A 
Sbjct: 231 GFKIAMSTLDGGRIGIASQALGIARAAYEEAVRYSGERKSFGKPIREHQAIQFMIADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  L +R A   D+    S E+A A++       +  +MA  V  +A++  GG GY
Sbjct: 291 EIDAARLLVWRAALQKDKGVRHSAESAMAKL-------YASEMASRVANKALQVHGGMGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
            +E  + RH R++    I  G+
Sbjct: 344 SKEMDVERHVRDARITEIYEGT 365


>gi|294812769|ref|ZP_06771412.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325368|gb|EFG07011.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 427

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 41/272 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  ++  DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 166 IAMTEPGTGSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDR 225

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F+V   LE     G    R  +K+G R++ T EL F+        D+ VS G +
Sbjct: 226 RHGISLFVVDTGLE-----GYAVGRKLDKLGLRTSDTAELSFT--------DVRVSAGDL 272

Query: 310 --EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             E+ K   YL           A+ + +    ++     Y R R V G  +      K  
Sbjct: 273 LGEEHKGFSYLGQNLPQERLAIAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFE 332

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A+  R  ++ D  +  + EAA A++       +C ++A  VI   ++ 
Sbjct: 333 LASCKAEVDAAEAVVDRALDAHDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQL 385

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 386 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 417


>gi|254776850|ref|ZP_05218366.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 386

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 36/372 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQ 145
           P    WD  E  P    +LR S   G+  +I+ R  E V      ++   R++    +A 
Sbjct: 25  PHALEWDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIAD 79

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+    TP   K W P++ + +             V     LTE 
Sbjct: 80  PTTAAFLSIHNMCAWMIDSYGTPEQRKGWVPRLAAMD-------------VIASYCLTEP 126

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +   G Y L G K F+S +  SD ++++A+  G     +   ++E 
Sbjct: 127 GAGSDAAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEK 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
           GS  GL +   + K+G  +  T ++            L  + G      I +       L
Sbjct: 186 GSA-GLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A 
Sbjct: 245 NIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAG 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D       E      +  + K +       V  +A++  GG GY+ E  + +  R+  
Sbjct: 305 ALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKILRDLR 358

Query: 439 ANSILLGSGNAM 450
            + IL G+   M
Sbjct: 359 VHRILEGTNEIM 370


>gi|218780925|ref|YP_002432243.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762309|gb|ACL04775.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 531

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 29/283 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259
           L+E +GG+D+ +   +  +  DG++ L G K+F S+  +D  ++ A+ +G  +VG F++P
Sbjct: 178 LSEIQGGSDVPSNLVEAVE-EDGVWKLYGTKFFCSAAHADYAMVTAKPKGSEKVGLFVMP 236

Query: 260 RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             L         N     R+K K+G     T EL  +    + +G L+     +  + +L
Sbjct: 237 SWLPGDKKKERRNSFTIDRIKWKMGTSELPTAELTMNGAVAYQVGPLDRGLANMVGV-VL 295

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  L   +   S M     EA  Y   R   G  +   P++   +AD+        A +
Sbjct: 296 TYSRLTVGLSGASSMIRVWREASKYCEFREAFGVNINFFPMVMGQLADMEKTAKRTLAGA 355

Query: 374 FRLANSFDE------AKSRSEEAAYAR---------IMAPITKYWCCKMAPAVIAEAMEC 418
           FRL     +        S+ E+ A  +         ++  I   W C   P V+  AM  
Sbjct: 356 FRLYKEVLDLPGGFLGASKDEDDAMKKKRFMVRELVMLQKICTSWDC---PDVVRAAMSM 412

Query: 419 IGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG G +E+ S + R YR++  N +  G  N ++  +   L+K
Sbjct: 413 FGGHGVMEDFSALPRLYRDAAVNELWEGPRNVLLTQMHRDLQK 455


>gi|120402372|ref|YP_952201.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955190|gb|ABM12195.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 387

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 154/371 (41%), Gaps = 44/371 (11%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGH 150
           WD+    PA   +LR +   G+  +I+ R  + V      +I A R++     A      
Sbjct: 32  WDETHHFPA--DVLREAAELGM-AAIYCR--DDVGGSGLRRIDAVRIFEKLATADPTVAA 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +S     A MV    T    K+W P++ S +                   LTE   G+D
Sbjct: 87  FLSIHNMCAWMVDSFGTEEQRKEWVPRLASMD-------------AIASYCLTEPGAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDG 265
            +A+ ++  +  D  Y L G K F+S +  SD ++++A+   +G  G   F+VP+     
Sbjct: 134 ASALRTKAVRSGDD-YVLDGVKQFISGAGSSDVYVVMARTGSDGPKGISAFVVPK----- 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLD 319
              GL +   + K+G  +  T ++ F          L G     TG    MK L    ++
Sbjct: 188 DTPGLSFGTDEQKMGWNAQPTKQVIFEGARVPADALLGGPDGEGTGFGIAMKGLNGGRIN 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+ G + +  ++  Y   R   GG L+D+P ++  +AD+A  +  +  L +R A +
Sbjct: 248 IAACSLGGAQTAYDKSAAYLADRQAFGGALLDEPTIRFTLADMATALETSRVLLWRAATA 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D       E      +  + K +       V  +A++  GG GY+ E  + +  R+   
Sbjct: 308 LDNDHPDRVE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRV 361

Query: 440 NSILLGSGNAM 450
           + IL GS   M
Sbjct: 362 HRILEGSNEIM 372


>gi|297171157|gb|ADI22167.1| acyl-CoA dehydrogenases [uncultured gamma proteobacterium
           HF0200_24F15]
          Length = 395

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 108/262 (41%), Gaps = 22/262 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +  E+      P   T   IG  GLTE   G+D   + S  + +  G Y      W  ++
Sbjct: 116 YGSEHQRQKFLPRLATGEVIGCFGLTEPDFGSDPGGMKSHARGVEGGFYVSGTKTWITNA 175

Query: 238 PMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           P++D F++ A+  EG +  F    LLE G P GL   R++ K   R++ T E+   N F 
Sbjct: 176 PIADVFVVWAKDEEGVIRGF----LLERGMP-GLVTTRIEGKFSLRASETGEISMDNVF- 229

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILID 351
             + D NV  G          L+ A   ++   +  AE   +A R     RH  G  L  
Sbjct: 230 --VPDENVFNGVHGLRGPFACLNLARFGIAWGAMGAAECCWHASRNYTLERHQFGRPLAA 287

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL   FD A  R  EA        + K   C  A  +
Sbjct: 288 NQLVQKKLADMQTEITLGLTGCLRLGRLFD-AGHRLPEA------VSLLKRNNCGKALDI 340

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A +  G +G  +E  + RH
Sbjct: 341 ARVARDLHGANGISDEYHVIRH 362


>gi|209546212|ref|YP_002278102.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539069|gb|ACI59002.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 395

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 24/263 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 116 FGSEAQKLKYLPKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISN 174

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +P++D F++ A+ E G +  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 APIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF 229

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
              + + N+  G          L+SA   ++   +  AE     A  Y   R   G  L 
Sbjct: 230 ---VPEENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLA 286

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+A +I+       RL    +E     E       +  I K   C  A  
Sbjct: 287 ANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALE 339

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  IARH
Sbjct: 340 IARAARDMLGGNGISDEFGIARH 362


>gi|115400327|ref|XP_001215752.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191418|gb|EAU33118.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 430

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 38/284 (13%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 144 NGSPDQKARFLPGLLSGDKIGALAMSEHSAGSDVVSMKTNAKAV-DGGYVLNGTKMWITN 202

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + + +G    R  +K+G R + T EL F N F 
Sbjct: 203 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFDGFSCARKLDKLGMRGSNTGELIFDNVFV 262

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG++N        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 263 PKENILGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 316

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKY 402
            +    +++  +AD+   +AA+ A ++  A   D + S     R+++ A A + A     
Sbjct: 317 PIAHNQLIQGKLADMYTKLAASRAYTYATARQIDNSASSGVVIRTQDCAGAILYAAERAT 376

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            C         +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 377 ECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|325122697|gb|ADY82220.1| putative acyl-CoA dehydrogenase protein (AcdB-like) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 378

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           LTE   G+D +AI  + ++  D  + L+G K F++S  +    +L  V  +      + C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALLFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP      +  G    R+++K+G  ++ T  + F +     L +L    G  E  KI 
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITFEDCR-IPLENLVGQEG--EGYKIA 233

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       +  A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I AA
Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFCLADMATQIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ +  
Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDFP 346

Query: 430 IARHYRESPANSILLGSGN 448
           + R YR+   + I  G+ +
Sbjct: 347 VERIYRDVRVSQIYEGASD 365


>gi|167837676|ref|ZP_02464559.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis
           MSMB43]
          Length = 395

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ QK+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAQKVPGG-YSLSGSKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +++      +   +LE G   GL    +  K+G R++ T E+     F   + D N+  G
Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPDENILPG 239

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADI 362
                     L+SA   ++   +  AE+  +  R++V      G  L    ++++ +AD+
Sbjct: 240 VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADM 299

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I        RL    DE  +  E       +  I K   C  A  +   A + +GG+
Sbjct: 300 QTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGN 352

Query: 423 GYIEERSIARH 433
           G  +E  +ARH
Sbjct: 353 GISDEFGVARH 363


>gi|254429573|ref|ZP_05043280.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195742|gb|EDX90701.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 380

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 19/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A +  Q + + DG  Y ++G K F++S +   +  +A   G  G   +
Sbjct: 125 LAITEPNGGSDVANL--QTRAVRDGDHYVVNGAKTFITSGVRADYYTVAVRTGDKGYGGI 182

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             LL E G+P     ++LK K+G  ++ T EL F +       L+G  N     +     
Sbjct: 183 SLLLIEKGTPGFTVGRKLK-KMGWWASDTAELFFEDCRVPVENLIGPENGGFYCIMSNFQ 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L  A+ + S  +++L EA+ Y + R   G  L    V +  +A++A D+ A+T  ++
Sbjct: 242 MERLILAVTANSTAQLALDEAMKYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTY 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A      ++   + + A+ +A        + A  V  +A++  GGSGY+    + R +
Sbjct: 302 RVAAQIAAGENCVLDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLF 354

Query: 435 RESPANSIL-LGSGNAMVLD 453
           R+   N IL +G G   +++
Sbjct: 355 RD---NRILSIGGGTHEIMN 371


>gi|121607229|ref|YP_995036.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121551869|gb|ABM56018.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 25/283 (8%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           DW       E   T   P         L +TE   G+D   + +  + + D +    G  
Sbjct: 107 DWGS-----EEQKTRLLPRIADGALAALAITEPDAGSDATGMRTSFRPVGDDVLVNGGKS 161

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +  +   +  +++  + EG  G    +   +LE G+P GL   RL++K+G R++ T  L 
Sbjct: 162 FITNGDRAGLYLLFGKWEGIAGARQSISVLILEQGTP-GLSVLRLEDKMGMRASGTATLA 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHV 344
           F    G  +   NV   P + +KIL   L+ +  SV+       R +  +A+ Y  +R  
Sbjct: 221 FD---GCRVPQANVLGQPGDGLKILFASLNKSRPSVAAHALGIARAAFEDAVAYINQRRQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYW 403
           SG  +++   ++  +AD+A ++A   +  +++A   D  A+    EA+  ++ A      
Sbjct: 278 SGQRILEFQGIQFMVADLAAELALVESWLWQVAGWVDAGAQDFGMEASLLKLRA------ 331

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +A  V  +A++ +GG GY ++  + R  R++    I  G+
Sbjct: 332 -TDLAMRVATDAVQLLGGYGYCKDYRVERLMRDAKITQIWEGT 373


>gi|121713100|ref|XP_001274161.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus
           NRRL 1]
 gi|119402314|gb|EAW12735.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus
           NRRL 1]
          Length = 428

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 162 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGM 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F N F     LLG+LN      + +++L
Sbjct: 221 SAFIVEKTTEGFSCARKLDKLGMRGSNTGELVFDNVFVPKENLLGELN------KGVRVL 274

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   +AA+
Sbjct: 275 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGIPIAHNQLIQGKLADMYTKLAAS 334

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A ++  A   D + S +E +   +  A    Y   + A     +A++ +GG+GYI E  
Sbjct: 335 RAYTYATARHIDNSASLAEVSIRTQDCAGAILY-AAERATECALDAIQLMGGNGYINEIP 393

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 394 AGRLLRDAKLYEIGAGT 410


>gi|226362825|ref|YP_002780603.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241310|dbj|BAH51658.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 16/270 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D +A ++      +G Y ++G KWF++   ++D  I+LA VE      + 
Sbjct: 121 VAISEANAGSDFSAASTTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPDNAATIF 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             L++  +P G+  + +            E  F N       +LG +    G   D+   
Sbjct: 181 --LIDVDTP-GVKIKHIPRYTHTFVYEHPEFTFENVRVGADAVLGGI----GQGHDLTRD 233

Query: 316 IYLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + +  +M    ++     +L  A+ +AR R   G  LI++ +++  IAD  +DI    A
Sbjct: 234 WFTEERLMIGARTIGAAERALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRA 293

Query: 372 LSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L+ ++A  FD+A     +        A   K    + +  V+  A++  GG GYI +  +
Sbjct: 294 LTHQVAWEFDQADPNDADLRKTLHAKAATVKLAASEASNRVVDRAVQIFGGRGYIRDYPV 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R +RE   + I  G+     L + N   K
Sbjct: 354 ERLWRELRVDRIWEGTSEIQRLVIANEANK 383


>gi|158319685|ref|YP_001512192.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139884|gb|ABW18196.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 379

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 24/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD +A   Q   + DG  Y L+G K F+++   +  +I++A
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDASA--QQTTAVLDGDSYILNGSKIFITNAGYAHIYIIMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +  VG   +   + D    G      + K+G + +AT EL F N       LLG    
Sbjct: 171 MTDKSVGTRGISAFIVDADTPGFTVGPKEKKLGIKGSATCELIFENCRIPKENLLGKEGK 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
             G    MK    LD   + ++   + +A     E +HY + R   G  +      +  +
Sbjct: 231 GFGIA--MKT---LDGGRIGIAAQALGIAQGALDETVHYVKERKQFGKPISAFQNTQFQL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + A+  L ++ A++ D     S EAA A++ A        + A  V  +A++  
Sbjct: 286 ADMAAKVEASRLLVYKAAHNKDMGLPYSYEAAMAKLFA-------SEAAMEVTTKAVQLH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY  E  + R  R++    I  G+
Sbjct: 339 GGYGYTREYPVERMMRDAKITEIYEGT 365


>gi|15600380|ref|NP_253874.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9951491|gb|AAG08572.1|AE004931_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 596

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVCGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|262198234|ref|YP_003269443.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081581|gb|ACY17550.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 387

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 20/264 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   T+  +G +G+TE   GTD+  + +  ++  DG Y LSGHK F++ +P ++ F++ A
Sbjct: 121 PRTLTAEHVGAMGMTEPAVGTDVLGMRTSARRTDDG-YVLSGHKTFITNAPEAEVFVVYA 179

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q++ R+  F+V R +     +G        K+G R++   EL F +        L    G
Sbjct: 180 QLDKRLTTFVVERGM-----SGFSVSDKIPKMGMRASTMAELVFEDVRVPAANLLGKEGG 234

Query: 308 PVEDMKILIYLDS---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            + +M   + ++    A MS+      L   + Y+  R   G  + D   ++R I +   
Sbjct: 235 GITNMMRNLEIERLGLAAMSLGIANRCLDVMVRYSSEREAFGKPISDFGQIQRYIGESYA 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A   L + +A +     SR+      R+     K +    A  V   A++ +GG GY
Sbjct: 295 KVEAIRGLLYGVARTVSHG-SRN------RLGTDAVKLFAATAAKEVADAAVQVLGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGSGN 448
             E  + +  R+  A  I +G G 
Sbjct: 348 CAEYRVEQFLRD--AKLIEIGGGT 369


>gi|114800213|ref|YP_759397.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114740387|gb|ABI78512.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 594

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 51/342 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  ALM   +  +   + PK+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWAGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y ++G K ++S    D       ++LA++EG       +  F+V
Sbjct: 173 DLGLMKTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVV 232

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  EDGS    N      L+ K+G   NAT  + +    G+L+G+ +     +  M 
Sbjct: 233 PKYMVKEDGSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----GI---------LIDQPVMKRAIA 360
               L   +  +S   ++   A+ +A+ R V G    G+         +I  P ++R + 
Sbjct: 293 NEARLGVGLQGMSQAEIAYQNALDFAKDR-VQGRSLTGVQAPDKPADPIIVHPDVRRMLL 351

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAE 414
           +    +  A A  + +A   D      +EA       Y  ++ P+ K +           
Sbjct: 352 EQKAFLEGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYLTHKGYESANL 411

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++  GGSG+  E  + +  R+   + I  G+     LD++ 
Sbjct: 412 GLQVHGGSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVG 453


>gi|319791524|ref|YP_004153164.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593987|gb|ADU35053.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 598

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 170/421 (40%), Gaps = 69/421 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALKAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258
           D+  + ++ +   DG Y ++G K F+S+    M+D  I  +LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPQPDGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  +  DGS    N +    L++K+G   NAT ++      G L+G+ N          
Sbjct: 235 PKFKVKADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLA-----A 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQ---PVMKRAIAD 361
           + + +++A + V    + L E     A+ YA+ R     +SG    D+   P++      
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVR 349

Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             L  A A A   R    F            + K R +      ++ PI K +       
Sbjct: 350 KMLLTAKAYAEGGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHI 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465
                M+  GG G+I+E  + +  R++  N I  G+     LD+L     G N      F
Sbjct: 410 ATNSCMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKF 469

Query: 466 EQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
            +L + L ++ G + K       I +L D ++    + G   F       A++   L  A
Sbjct: 470 GKLVARLVEEEGVNEKMAEFINPIAMLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVA 529

Query: 521 G 521
           G
Sbjct: 530 G 530


>gi|117619749|ref|YP_856608.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561156|gb|ABK38104.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 382

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 128/260 (49%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++     +  D  + L+G+K W  + P +D F++ A+ +   G    
Sbjct: 123 LAMSEPGAGSDVVSMRLTAVREGDH-FVLNGNKMWITNGPDADTFVIYAKTDPAAG---- 177

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306
           P+     ++E G+P     Q+L +K+G R ++T EL F       +N  G L G + V  
Sbjct: 178 PKGISAFIVEAGTPGFSTAQKL-DKLGMRGSSTCELVFDNCRVPQANLLGPLHGGVKVLM 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  ++++    A   +  M+  +   + Y R R   G  + +  +++  +AD+   +
Sbjct: 237 SGLDYERVVL----AAGPLGIMQACMDVVLPYVRERKQFGQPIGEFQLVQGKLADMYTRL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A++ AL + +A++ D+A++  ++ A A + A        + A  +  +A++ +GG+GYI 
Sbjct: 293 ASSRALVYSVASACDQARTSRKDCAAAILFA-------AENATQMALDAIQLLGGNGYIN 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 346 EYPTGRLLRDAKLYEIGAGT 365


>gi|71652152|ref|XP_814739.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70879737|gb|EAN92888.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 624

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 54/299 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV--- 253
           LTE + GTD+A + ++ +  +DG Y L+G K F+S+   D       I+LA++   V   
Sbjct: 189 LTEPQCGTDLAQVKTKAEPCADGSYKLNGTKIFISAGDHDMTENIVHIVLARLPDSVPTT 248

Query: 254 ---GCFLVPR--LLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                FLVPR  +  DGS     N  C   L++K+G + +AT +L F N+ G+L+G    
Sbjct: 249 KGISLFLVPRHVVKPDGSLETNKNVKCVG-LESKMGIKGSATAQLSFENSVGYLIG---- 303

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQP- 353
              P E MK +  ++++A +  S   V  AE     A+ YAR    +R +SG    D+P 
Sbjct: 304 --APNEGMKQMFTFMNTARVGTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPN 361

Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMA 397
                        +  +A+A+             RL +   EAK  S   A         
Sbjct: 362 DPLVWHPNVRQNILFAKAVAEGGRAFLTDMG---RLLDIQGEAKDASLRDALEHEIGFYT 418

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           PI K    +      +  ++  GG GYI+   + +  R++  +++  G+     LD + 
Sbjct: 419 PIAKGCLTEWGLEASSRCLQVWGGHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIG 477


>gi|296392044|ref|ZP_06881519.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 596

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|94498439|ref|ZP_01304996.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94422087|gb|EAT07131.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 581

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 46/337 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD+A + ++   + DG Y ++G K F+SS   D       ++LA+      
Sbjct: 161 MALTESGAGTDLALLKTRAAPLDDG-YAITGTKIFISSGDHDFGGNIVHLVLARLPDAPA 219

Query: 249 -VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP+ L D S      N L    L+ K+G  +  T  + +    G+L+G+ 
Sbjct: 220 GVKG-ISLFLVPKFLPDESGGFTARNTLSVGALEKKMGIHAQPTCVMNYDGATGWLVGEP 278

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGGI----LID 351
           +     +  M  ++  +  ++ + G+ ++ A     A       + R   G      +ID
Sbjct: 279 HRG---LAAMFTMMNTERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSADGKAGPVAIID 335

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405
              ++R +  +   + A  AL+   A   D A++  + +  AR      ++ P+ K    
Sbjct: 336 HADVRRMLLGVRAFVEAGRALAGWTALQLDRAQAHPDPSERARADARVALLTPVIKAAFT 395

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            +      +A +  GG GYI E  + +  R++    I  G+     +D++   L   G  
Sbjct: 396 DLGFEGAVQAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVGRKLGMGGGT 455

Query: 464 LFEQLFSTLEQDLGSSGK-----KVITILRDSISLCK 495
           + E+ F+ ++ DL S  +      V+   R +++L +
Sbjct: 456 VVEEFFALIDADLDSLAEAAVNHSVVAQTRQALALLR 492


>gi|27366926|ref|NP_762453.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
 gi|27358493|gb|AAO07443.1| Branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
          Length = 384

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 45/365 (12%)

Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164
           + ++WD + F PV V K+A ++    LY         M++L+A  +    S+   S  A 
Sbjct: 27  NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 86

Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           MT   +H   +W    F ++E        +   ++     LTE   G+D A++ +   + 
Sbjct: 87  MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGALLGSYCLTEPNSGSDAASLKTTATRQ 143

Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLK 276
            D  Y ++G K F+S +  +   +++A+  G     V  F+VP         G+ Y R +
Sbjct: 144 GDE-YRINGAKAFISGAGETQVLVVMARTGGEGAKGVSAFVVP-----ADAQGVSYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            K+G  S  T  + F N        LG+       +   ++  +I I    A  SV   +
Sbjct: 198 PKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  Y + R   G  L +   ++  +AD+A+++ AA  L    A+  D  K   + 
Sbjct: 254 QALNLATQYVQERKQFGHTLAEFQTVQFRLADMAIELIAARQLVRFAASKLD--KGDPDA 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            AY      + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G+   
Sbjct: 312 TAYC----AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEI 367

Query: 450 MVLDV 454
           M L V
Sbjct: 368 MRLIV 372


>gi|300704832|ref|YP_003746435.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299072496|emb|CBJ43846.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 397

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+   + F 
Sbjct: 174 SPIADVFVVWAKLPDENGDDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353
             + + N+  G          L+SA   ++   +  AE+  +  R++V       +P   
Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLAA 290

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365


>gi|282864406|ref|ZP_06273462.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE]
 gi|282560893|gb|EFB66439.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE]
          Length = 383

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 45/302 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   +    + W P++ S E              A+G  GLTE   G+D  ++ ++
Sbjct: 95  AKTVASWGSEEQKRQWLPRLTSGE--------------ALGCFGLTEPGTGSDAGSLATK 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G K F+++   +D  ++ A+     G   V   L      GL  + + 
Sbjct: 141 AVRDGDD-YVINGSKMFITNGTWADVVLLFARTGDTPGHRGVSAFLVPADAPGLTRRTVH 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329
            K+G R  AT EL        +L D+ V      GP E     I + +     MSV+   
Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPATALMGP-EGKGFSIAMSALAKGRMSVAAGC 250

Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +A+A     + YA  R   G  +    +++  I+DI++D+ AA  L++R+A+  D  +
Sbjct: 251 VGIAQAALDAAVRYAGEREQFGKSIASYQLVQELISDISVDVDAARMLTWRVADLVDRGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A++ A        + A      A++  GG GYI+E  + +  R++   ++  
Sbjct: 311 DFATAASTAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPVGKLVRDARVMTLYE 363

Query: 445 GS 446
           G+
Sbjct: 364 GT 365


>gi|325927007|ref|ZP_08188281.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325542626|gb|EGD14094.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            +      G+ Y R + K+G  S  T  + F N       LLG  N   G    MK L  
Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLG--NEGEGFKMAMKALDG 248

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +   
Sbjct: 249 GRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHT 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D           A +   + K +      A+  +A++  GG GYI E  I R  R
Sbjct: 309 AARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLR 362

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           +S  + IL G+   M + V   L  G
Sbjct: 363 DSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|296161567|ref|ZP_06844372.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295888211|gb|EFG68024.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 53/307 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A +V    TP     + PK  + E+               G+GLTE   GTD+ AI +  
Sbjct: 97  AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271
           +++ D  Y ++G+K W  +S   +   +L + +        PR      LL    P G  
Sbjct: 144 KRVGDE-YVVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHRGMSLLLVQKGP-GFE 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324
             R   K+G +   T EL F+        D +VST    G VE     +IL  L+   ++
Sbjct: 198 VSRQLEKLGYKGIDTCELSFN--------DYHVSTDALIGGVEGRGLQQILGGLELGRIN 249

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V +A     E++ Y+++R   G  + +   ++  + ++A  + A   L    A  
Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQK 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D  +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P 
Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPL 362

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 363 LTIGEGT 369


>gi|197121603|ref|YP_002133554.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196171452|gb|ACG72425.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247
           AP  +      L ++E   G+D+AAI +  ++  DG    ++G K ++++     F+ LA
Sbjct: 119 APAVRGERVAALAISEPDAGSDVAAIRTTARR--DGADLVVNGSKMWITNGARADFLTLA 176

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
              G  G   +  LL      G    R   K+G  S+ T  L F         LLG+ + 
Sbjct: 177 VRTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEECRVPAANLLGEQDQ 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V        L +A+ +V+GM++ L +A+ Y   R   G  +      +  +AD   
Sbjct: 237 GFYHVMANFQGERLVAAVQAVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L++R A+     +    E + A++ A       C++A  V  + M+  GG GY
Sbjct: 297 AVEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGY 349

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  IAR +R+  A +I  G+   M
Sbjct: 350 VLESDIARAWRDVRAMTIAGGTSEIM 375


>gi|304321290|ref|YP_003854933.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303300192|gb|ADM09791.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 598

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 54/369 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M  S+T  ++ AL+   T      + PK+ + E+  T             + L+E   G+
Sbjct: 124 MGMSLTQGAVKALLKYGTDEQKALYLPKMATAEWSGT-------------MNLSEPHAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D++ +  + + + DG + + G K ++S    D       ++LA++    EG  G   FLV
Sbjct: 171 DLSQLKCKAEPVGDGTFKIKGTKCWISYGDHDLTENICHLVLARLPDAPEGTKGISMFLV 230

Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           P  R+ EDGS    N +    ++ K+G   + T  + F +     G L+G  N     + 
Sbjct: 231 PKYRVNEDGSLGSRNDVNIVSIEEKLGQHGSPTCVISFGDDDDCLGTLVGKENEGLKNMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILI---DQPVMKRAIAD 361
            M     +D  +   S    S  +A+ YA+ R       V  G  +   + P ++R +  
Sbjct: 291 VMMNSARIDVGMQGTSASEASFQKALQYAQERPQGRPYGVRSGPQVPIYEHPDVRRQLMT 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEE----AAYAR--IMAPITKYWCCKMAPAVIAEA 415
           +     A+ AL +  A + D A+  ++E    AA  R  ++ P+ K +    A  V    
Sbjct: 351 MRALTDASRALGYAAAIAHDIAEKATDEDVRRAAKEREDLLTPLAKAFPTDRAMEVTNHG 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQL--FS 470
           ++  GG G++EE   A+ YR++    I  G+     +D++     + +G   F+ +   S
Sbjct: 411 IQIHGGMGFVEETGAAQFYRDARITQIYEGTNGIQAIDLVGRKLGMGEGKLAFDFMDDIS 470

Query: 471 TLEQDLGSS 479
            L Q+L  S
Sbjct: 471 ALSQELADS 479


>gi|116053335|ref|YP_793659.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588556|gb|ABJ14571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 596

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|317130791|ref|YP_004097073.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475739|gb|ADU32342.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 379

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 26/271 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRV---GC 255
           GLTE   G+D A + +  ++  DG  Y L G K F+++   ++ +++ A  +      GC
Sbjct: 124 GLTESGSGSDAAGMRTTAKR--DGSDYVLDGSKIFITNAGEAEIYVVFALTDPESKHKGC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
                ++E G P G    + ++K+G RS+ T+E+ F    G  +   N+     E  KI 
Sbjct: 182 SAF--IVEKGMP-GFSMGKKESKLGIRSSPTLEIIFD---GCRVPKENLLGKEGEGFKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD     ++   V +A+     +I YA+ R   G  +  Q  +   IA++A  + A+
Sbjct: 236 MMTLDGGRNGIAAQAVGIAQGALDASIEYAKERKQFGKPIGAQQAISFKIAEMATKVEAS 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+++ A    E  S  +E+A       ++K +    A  V  EA++  GG GY +E  
Sbjct: 296 RLLTYQAAWRESEGLSYGKESA-------MSKLFAGDSAMEVTTEAVQVFGGYGYTKEYP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R+ R++    I  G+     L +  +L K
Sbjct: 349 VERYMRDAKITQIYEGTNEIQRLVISKMLLK 379


>gi|217959850|ref|YP_002338406.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|229139044|ref|ZP_04267621.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|217065597|gb|ACJ79847.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|228644399|gb|EEL00654.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|315506402|ref|YP_004085289.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413021|gb|ADU11138.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 606

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 55/304 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A +T++ +   DG Y + G K ++S    +       ++LA++ G     
Sbjct: 166 LSEPQAGSSLADLTTRAEPQDDGTYRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGV 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295
             +  F+VP++L D     G  N +    L +K+G R      L F          +   
Sbjct: 226 KGLSLFIVPKVLLDDDGNLGPRNDVVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAV 285

Query: 296 GFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
           G+L+G       P + + ++ ++ + A + +     +L      +++ YAR+R     + 
Sbjct: 286 GYLVGQ------PHQGLAVMFHMMNEARIGIGAGATALGYTAYLKSVAYARQRPQGRPVA 339

Query: 350 IDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394
              P            ++R +      +  A AL        DE K+   EA   R    
Sbjct: 340 DKDPTTPQMPIVAHSDVRRMLLAQKSYVEGALALVLYCGRLLDEQKTAPAEADRERAQLL 399

Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ PITK W  +   A    A++  GG GY  +  + +H+R++  N+I  G+     L
Sbjct: 400 LDLLTPITKSWPAQWCLAANDLAIQVHGGYGYTRDYDVEQHWRDNRLNAIHEGTHGIQAL 459

Query: 453 DVLN 456
           D+L 
Sbjct: 460 DLLG 463


>gi|257094072|ref|YP_003167713.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046596|gb|ACV35784.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 558

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 143/333 (42%), Gaps = 51/333 (15%)

Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG L++ P + S S++   T  +  K W PK+   E       P+        + +TE  
Sbjct: 244 AGSLITRPEILSRSLLKGGTEAQREK-WLPKVAVGE-------PL------CAIAVTEPD 289

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC--FLV 258
            G+D+AA+  +  K   G + L G K W   +  +   ++LA+       G  G   FLV
Sbjct: 290 TGSDVAAMRLKATKCEGG-WILDGVKTWCTMAGKAGVLLVLARSNPDRSLGHKGLSMFLV 348

Query: 259 PRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +   DG          G+   R  + IG R   + E+ F + F   + D N+  GP  +
Sbjct: 349 EKDSYDGHDFEYRQRQGGVLSGRAISTIGYRGMHSYEVFFDHVF---VPDENLVGGPEGE 405

Query: 312 MKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            K   +         + +A  ++  M+ +   A+ Y++ RH  G  + +  +    +A +
Sbjct: 406 GKGFYFTMAGFAGGRIQTAARAIGVMQAAFERAVSYSQERHAFGKPIGEFQLTLVKLARM 465

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  +   ++ +    D+ + + E        A + K + C+ A  +  EAM+  GG 
Sbjct: 466 ATLLTVSRQFTYAVGALMDQGQGQME--------ASMVKLFTCRTAEWLTREAMQIHGGM 517

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY EE  ++R++ ++   SI  G+   + L V+
Sbjct: 518 GYAEESPVSRYFLDARVLSIFEGAEETLALKVI 550


>gi|29833461|ref|NP_828095.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610584|dbj|BAC74630.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 390

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257
           L+E   G+D A++ ++  +  D         W     ++D + ++A+  G     +  FL
Sbjct: 133 LSEPSSGSDAASLRTKAVRDGDDWVITGTKAWITHGGIADFYTVMARTGGEGARGITAFL 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T ++ F    G  + D        +   I L 
Sbjct: 193 VP-----GDAEGLHAALPEKKMGMKGSPTAQVHFD---GVRVSDERRIGDEGQGFAIALS 244

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A  A
Sbjct: 245 ALDSGRLGIAACAVGVAQAALDEAVAYATGRQQFGRPIADFQGLRFMLADMATQIEAGRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S++AA A+++       C   A  V  +A++ +GG GY  +  + 
Sbjct: 305 LYLAAARLRDAGRPFSKQAAMAKLL-------CTDAAMKVTTDAVQVLGGYGYTADFPVE 357

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I+ G+
Sbjct: 358 RYMREAKVLQIVEGT 372


>gi|300697298|ref|YP_003747959.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299074022|emb|CBJ53559.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum
           CFBP2957]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           I   LTE   G+D A++ ++     D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N   +   ++G +    G  
Sbjct: 179 ISAFIVP-----ADTPGITLGKHDKKMGQRGTKTCDVMLDNVRVSAANIIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A  YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAAAYAKGRRQFGQPIADFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK    +     ++A  +K +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGRQDHEVSMLASCSKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E  + R YR+
Sbjct: 349 IAEYKVERFYRD 360


>gi|224106760|ref|XP_002314277.1| predicted protein [Populus trichocarpa]
 gi|222850685|gb|EEE88232.1| predicted protein [Populus trichocarpa]
          Length = 420

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 35/307 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P   + + PK+ S E+              +G L ++E   G+D+ ++  +  ++ DG 
Sbjct: 143 NPAQRQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 187

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y ++G+K W  + P++   ++ A+     G   +   ++E G P     Q+L +K+G R 
Sbjct: 188 YIINGNKMWCTNGPVAQTLVVYAKTNVTAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 246

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++      M+  L   + Y R
Sbjct: 247 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYIR 306

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  IAD+   + ++ +  + +A   D  +   ++ A   + A   
Sbjct: 307 QREQFGHPIGEFQFIQGKIADMYTSLQSSRSYVYSVARDCDSGRIDPKDCAGVILCAA-- 364

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                + A  V  +A++C+GG+GY+ E S  R  R++    I  G+G + +  ++     
Sbjct: 365 -----ERATQVALQAIQCLGGNGYVNEYSTGRLLRDAKLYEI--GAGTSEIRRMI----I 413

Query: 461 GTNLFEQ 467
           G  LF+Q
Sbjct: 414 GRELFKQ 420


>gi|222095939|ref|YP_002529996.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|221239997|gb|ACM12707.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 38/315 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFE 466
           L V  +L K     E
Sbjct: 403 LTVAKMLMKQVEQIE 417


>gi|167624790|ref|YP_001675084.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354812|gb|ABZ77425.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 385

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+  Q + + DG  Y +SG K F+S   +   +++    G  G   +  
Sbjct: 124 LTEPGAGSDAAAL--QTKAVRDGDEYVISGSKVFISGAGATELLVVMCRTGGAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           +       G+ Y + ++K+G  +  T E+ F N      +LLG+     G    MK L  
Sbjct: 182 IAVPADAAGIIYGKAEDKMGWNAQPTREITFENVRVPASYLLGE--EGQGFTFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S+   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  L  R
Sbjct: 240 GRINIATCSIGTAQAALERATQYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +F   +   E  AY      + K +   +   V   A++  GG GYI E  + RH R
Sbjct: 299 LA-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERHVR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|145298893|ref|YP_001141734.1| isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851665|gb|ABO89986.1| Isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 382

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/345 (20%), Positives = 150/345 (43%), Gaps = 26/345 (7%)

Query: 116 HCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRVHKD 173
           H +++ R   P + +   H I  A  Y    L    H++     S +  ++  +   H +
Sbjct: 33  HSNVFPRDLWPQMGELGLHGITVAEEYDGVSLGYLAHVLVMEQVSRASASVGLSYGAHSN 92

Query: 174 WAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
                  R   P  KA   P   +   +G L ++E   G+D+ ++    +   D  + L+
Sbjct: 93  LCINQIHRHGTPDQKARYLPSLVSGEHVGALAMSETGAGSDVVSMRLTAKHDGDH-FVLN 151

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G+K W  + P +D F++ A+ +   G   +   + +    G    +  +K+G R ++T E
Sbjct: 152 GNKMWITNGPDADTFVIYAKTDTSAGPKGISAFIVEAGTQGFTTAQKLDKLGMRGSSTCE 211

Query: 289 LEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           L F N         G L G   V    ++  ++++    A   +  M+  +   + Y R 
Sbjct: 212 LVFDNCRVPQENLLGTLHGGARVLMSGLDYERVVL----AAGPLGIMQACMDVVLPYVRE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +AD+   +A++ AL + +A++ D+ ++  ++ A A + A    
Sbjct: 268 RKQFGQAIGEFQLVQGKLADMYTRLASSRALVYSVASACDQGRTSRKDCAAAILFA---- 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + A  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 324 ---AENATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 365


>gi|148654496|ref|YP_001274701.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148566606|gb|ABQ88751.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 383

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 45/273 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D  A T    ++ +G + ++G K W  S+ ++   I+ A  +      +   
Sbjct: 125 LTEPHAGSDAGA-TRTTARLENGEWVINGAKMWITSASVAGHLIVTAVTDPGERHSISAI 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
           +VP     G+P GL + + + K+G R + T  + F         D+ V   P E++    
Sbjct: 184 IVP----AGTP-GLSFGKPEAKMGLRGSITNAVTFE--------DVRV---PEENLLGRR 227

Query: 313 -----KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADI 362
                + L  LD   + +  M + LA+A       YAR R   G ++     +   IAD+
Sbjct: 228 GRGLQQFLAVLDGGRIGIGAMAIGLAQAAFEIASAYARERTAFGKLIGAYESVSNMIADM 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ + AA  L ++ A   D+ +  S EAA A++ A       C+       +A++ +GG 
Sbjct: 288 AVGLEAARLLVYQAAWLKDQGRQYSREAAIAKLYASEVGEKICR-------DAIQVLGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY  E  + R YR+     + +G G + +L V+
Sbjct: 341 GYSSEYPLERIYRDQ--RLLTIGEGTSEILRVV 371


>gi|322824208|gb|EFZ29682.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 624

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 54/299 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV--- 253
           LTE + GTD+A + ++ +  +DG Y ++G K F+S+   D       I+LA++   V   
Sbjct: 189 LTEPQCGTDLAQVKTKAEPCADGTYKINGTKIFISAGDHDMTENIVHIVLARLPDSVPTT 248

Query: 254 ---GCFLVPR--LLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                FLVPR  +  DGS     N  C   L++K+G + +AT +L F N+ G+L+G    
Sbjct: 249 KGISLFLVPRHVVKPDGSLETNKNVKCVG-LESKMGIKGSATAQLSFENSVGYLIG---- 303

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQP- 353
              P E MK +  ++++A +  S   V  AE     A+ YAR    +R +SG    D+P 
Sbjct: 304 --APNEGMKQMFTFMNTARVGTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPN 361

Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMA 397
                        +  +A+A+             RL +   EAK  S   A         
Sbjct: 362 DPLVWHPNVRQNILFAKAVAEGGRAFLTDMG---RLLDIQGEAKDASLRDALEHEIGFYT 418

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           PI K    +      +  ++  GG GYI+   + +  R++  +++  G+     LD + 
Sbjct: 419 PIAKGCLTEWGLEASSRCLQVWGGHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIG 477


>gi|304311238|ref|YP_003810836.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796971|emb|CBL45184.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 558

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 30/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           + +TE   G+D+A +  +  + +DG + L+G K W   +  +   + LA+       G  
Sbjct: 282 VAVTEPNYGSDVAQMRLKATR-TDGGWHLNGEKTWCTFAGKAGVLLTLARTNPDLSVGHR 340

Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300
           G   FLV +   DG       +  G    +    IG R   +  + F N F      + G
Sbjct: 341 GLTMFLVEKPSSDGHEFNHTQATGGTVSGKAIPTIGYRGMHSFTVFFDNYFVPDSHVIGG 400

Query: 301 DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +  V  G    M       + +A  +   M+ +    I YA+ R V G  +   P+    
Sbjct: 401 EAGVGQGFYFTMAGFAGGRIQTAARATGVMQAAFERGIAYAQERQVFGKPIAAYPLTLVK 460

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA +A+ ++ +   ++ +A   DE K   E        A + K + CK +  +  EAM+ 
Sbjct: 461 IARMAMLLSVSRQFTYYVARLMDEGKGHME--------ASLVKLYSCKSSEWLCREAMQI 512

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            GG GY EE +++R++ +S   SI  G+   + L V+
Sbjct: 513 HGGMGYAEESAVSRYFIDSRVLSIFEGAEETLALKVI 549


>gi|331224454|ref|XP_003324899.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303889|gb|EFP80480.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 433

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 26/259 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   TS      L+E   G+D  A+ ++  K S+G Y ++G K W  +S  ++ F++ A 
Sbjct: 177 PDLSTSKVACFCLSEPGSGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFAN 236

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++   G     CFL+ + +      G+   + + K+G ++++T  L F N       +L 
Sbjct: 237 LDPSKGYKGISCFLLEKSM------GVEIAKKEEKLGIKASSTCTLNFDNV-KVPKENLI 289

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
              G      I I L+   + ++   V LA+     A+ Y  +R   G  + +   M+  
Sbjct: 290 GQEGLGYKYAIEI-LNEGRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQ 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            AD+  +I AA  L++  A   +E K  +E       MA + K +  ++A      A+E 
Sbjct: 349 FADVHTEIEAARMLTYNAARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEW 401

Query: 419 IGGSGYIEERSIARHYRES 437
            GG G+  E  I +++R+S
Sbjct: 402 CGGVGFTRETGIEKYWRDS 420


>gi|302525971|ref|ZP_07278313.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302434866|gb|EFL06682.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 383

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 15/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LV 258
           L +TE  GG+D+A I +   +  D  Y L+G K F++S     F+      G  G   L 
Sbjct: 126 LAVTEPDGGSDVAGIRTTAVREGD-EYVLNGAKTFITSGCRADFVTTVVRTGEAGAHGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             ++E G+P G    R   K+G  ++ T EL + +       L+G  N     V    + 
Sbjct: 185 LIVVERGTP-GFTVSRKLEKMGWAASDTAELSYVDVRVPAENLVGAENSGFAQVATQFVT 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + +  + +L   + + R R   G  LI + +++  + ++A  +  A   + +
Sbjct: 244 ERLSLAVQAYAHAQRALDLTLDWCRMRETFGRPLISRQLVQHKLTEMAGKVDVARTYARQ 303

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A      +    EA +A+  A  T  W       V+ EA++  GG GY+ E  + RHYR
Sbjct: 304 VALRHVSGEEVIAEACFAKNTAVQTAEW-------VVNEAVQLHGGLGYMRESEVERHYR 356

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 357 D--VRILGIGGGTTEILTGL 374


>gi|302381946|ref|YP_003817769.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192574|gb|ADL00146.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 593

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 151/344 (43%), Gaps = 56/344 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+ +   +    +  +   + PK+ + E+  T             + LTE + GT
Sbjct: 124 MYPGLTAGAYAGIHANASEELKTKYLPKMATGEWGGT-------------MNLTEPQCGT 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258
           D+  + ++     DG Y ++G K ++S+     +D  I  +LA+VEG       +  FLV
Sbjct: 171 DLGMVRTKAVPQGDGTYKITGQKIWISAGEHDFTDNIIHTVLARVEGAPAGIKGLSLFLV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+++  +DGS    N L    L++K+G   NAT  +++ +  G+L+G+       + +M 
Sbjct: 231 PKVMVNDDGSLGERNSLQCAGLEHKMGIHGNATCVMQYDDATGWLIGEEGRG---MNNMF 287

Query: 314 ILI---YLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRA 358
           +++    L + +  ++    +   A+ +A+ R                  ++  P ++R 
Sbjct: 288 VVMNEARLGTGLQGLAIGAAAYQAALEFAKDRIQGRSLTGPKNPDAQADSIMVHPDVRRM 347

Query: 359 IADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           + +    +         TAL   L  S DEA + ++   Y  ++ P+ K +       V 
Sbjct: 348 LLEAKAFVEGGQAFVLWTALQADLEKSADEATA-TKAKDYMGLLTPVLKAYLTDKGFHVA 406

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  M+  GGSGY E    +++ R++    I  G+     LD++ 
Sbjct: 407 SLGMQVHGGSGYTEHFQASQYLRDARITMIYEGTNGIQALDLVG 450


>gi|226939920|ref|YP_002794993.1| acyl-CoA dehydrogenase, short chain specific [Laribacter
           hongkongensis HLHK9]
 gi|226714846|gb|ACO73984.1| acyl-CoA dehydrogenase, short chain specific [Laribacter
           hongkongensis HLHK9]
          Length = 384

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   +  D  Y ++G K F++ +P +  + ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYVINGTKRFITNAPHASIYTVMARTNPEIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     +P G+   +  +K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NTP-GVSLGKCDHKMGQKGAHTSDVIFDNVRVPASQLIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      LA+++ YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAAERMLADSLQYAMERKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   DE ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 RCMVLDAARKRDEGRNVSTEASCA-------KMFATEMCGRVADRGVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|190890618|ref|YP_001977160.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190695897|gb|ACE89982.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 591

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 46/298 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   G+D+ A+ ++ ++  DG Y + G K F++    DA      ++LA++     
Sbjct: 160 MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPA 219

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295
               +  FLVP+ L  +DGS    N L    L++K+G   + T  + + +          
Sbjct: 220 GTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGGEKGAI 279

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR-------H 343
           G+L+G+ N     +  M     +++A ++V    V++AEA     + YAR R        
Sbjct: 280 GWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKALAYARERTQGRAPGS 334

Query: 344 VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAP 398
              G+  ++D P + R +  +      + A+S+  A++ D ++   +   +   A ++ P
Sbjct: 335 TGPGMSPIVDHPDVARMLLTMKALTQGSRAISYACAHAIDMSRRAGDSRHWQERAALLTP 394

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           I K +       V +  ++  GG G+IEE   AR+ R++    I  G+     +D++ 
Sbjct: 395 IAKAFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVT 452


>gi|312113477|ref|YP_004011073.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218606|gb|ADP69974.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 387

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 125/255 (49%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++ ++ +K  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 129 LAMSEAEAGSDVVSMRTRAEKRGD-RYVLNGTKMWITNAPHADVLVVYAKTDPTAGQRGI 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              L+E G P      +L +K+G R + T EL F +     + + NV  G    + +L+ 
Sbjct: 188 TAFLIEKGMPGFTVSPKL-DKLGMRGSDTAELVFEDCE---VPEANVMGGEGRGVSVLMS 243

Query: 318 ---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               + A+++      M+ +L   + Y   R   G  +    +++  +AD+A+ + +A A
Sbjct: 244 GLDYERAVLAAGPLGIMQAALDIVLPYIHERKQFGKPIGTFQLVQGKVADMAVALNSARA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D A++  E+AA A +       +  + A  V  +A++ +GG+GYI + +  
Sbjct: 304 YVYAVARACDRAQTTREDAAGAIL-------YAAEAATRVALDAIQLLGGTGYINDTATG 356

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 357 RLLRDAKLYEIGAGT 371


>gi|89901524|ref|YP_523995.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89346261|gb|ABD70464.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 387

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 34/268 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+  I +   + SDG Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMSEPAAGSDLQGIKATAIRQSDGSYLLNGSKTFITNGWHADLVIVVAKTNPAAGAKGT 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKI 314
             LL +    G    +   K+G ++  T EL F N        L G  + + G +  M+ 
Sbjct: 184 SLLLVERGMAGFSVGKRLKKMGMKAQDTSELFFDNVRVPADNLLGGPAHENRGFICLMEQ 243

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           L +  L  AI +++  + ++   + Y + R V G     QPV      +  +A++  ++ 
Sbjct: 244 LPWERLQIAIGAIAASQAAIHWTVDYVKERKVFG-----QPVAAFQNTRFTLAELQTEVQ 298

Query: 368 AATAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A           + N+ D A             A + KYWC  +   V+ E ++  GG 
Sbjct: 299 IAQVFIDKCTELLMTNTLDTA------------TASMAKYWCSDLQCKVMDECVQLFGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  I R Y ++    I  G+   M
Sbjct: 347 GYMWEYPITRAYVDARPQRIYGGTNEIM 374


>gi|47565708|ref|ZP_00236748.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|47557344|gb|EAL15672.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
          Length = 569

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|302867189|ref|YP_003835826.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570048|gb|ADL46250.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 606

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 55/304 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A +T++ +   DG Y + G K ++S    +       ++LA++ G     
Sbjct: 166 LSEPQAGSSLADLTTRAEPQDDGTYRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGV 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295
             +  F+VP++L D     G  N +    L +K+G R      L F          +   
Sbjct: 226 KGLSLFIVPKVLLDDDGNLGPRNDVVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAV 285

Query: 296 GFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
           G+L+G       P + + ++ ++ + A + +     +L      +++ YAR+R     + 
Sbjct: 286 GYLVGQ------PHQGLAVMFHMMNEARIGIGAGATALGYTAYLKSVAYARQRPQGRPVA 339

Query: 350 IDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394
              P            ++R +      +  A AL        DE K+   EA   R    
Sbjct: 340 DKDPTTPQVPIVAHSDVRRMLLAQKSYVEGALALVLYCGRLLDEQKTAPAEADRERAQLL 399

Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ PITK W  +   A    A++  GG GY  +  + +H+R++  N+I  G+     L
Sbjct: 400 LDLLTPITKSWPAQWCLAANDLAIQVHGGYGYTRDYDVEQHWRDNRLNAIHEGTHGIQAL 459

Query: 453 DVLN 456
           D+L 
Sbjct: 460 DLLG 463


>gi|229091330|ref|ZP_04222545.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|228691959|gb|EEL45701.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
          Length = 569

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|229155931|ref|ZP_04284032.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228627538|gb|EEK84264.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 569

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|86158090|ref|YP_464875.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774601|gb|ABC81438.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 380

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253
             LTE   G+D A + +   +  D  Y L G K F+++ P +DA ++ A  +       +
Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181

Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             FLVP   R    G P+        +K+G R++ +  L F        + LG+      
Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCAIPARYRLGEEG---- 229

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361
             +  KI +  LD   + ++G  + +A A       YA+ R   G  +     ++  +AD
Sbjct: 230 --DGFKIAMGTLDGGRIGIAGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA  L  R A++ D     S E+A A++ A        +M+  V ++A++  GG
Sbjct: 288 MATEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY++E  + RH+R+S    I  G+
Sbjct: 341 YGYVKEFDVERHWRDSRITEIYEGT 365


>gi|258512022|ref|YP_003185456.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478748|gb|ACV59067.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 377

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 32/274 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           PM +       GLTE   G+D A  T     +    + ++G+K F ++     +++L  V
Sbjct: 113 PMARGEALGAFGLTEPGAGSD-AGGTRTTAVLEGDEWVITGNKIFNTNGGYAKYVVLTAV 171

Query: 250 EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
                  +  F+VP   E     G    +   K+G R++ TVEL   +       LLG L
Sbjct: 172 TDPASRGISAFIVPTDAE-----GFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPL 226

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           N         + L  LD   ++++ + V +A A     + YA+ R   G  +     ++ 
Sbjct: 227 NAGF-----KQFLSTLDGGRVAIAALAVGIARAAFETALAYAKTRVQFGQAISKFQAIQH 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ I  A     + A   D+ +  + EA+YA++ A        +M      +A++
Sbjct: 282 KLADMAMHIDLARNAVMKAAWLKDQGRPYTLEASYAKLFA-------SEMCTRTCEQAIQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +GG GY+ E  + RHYR+  A  I +G G + +
Sbjct: 335 ILGGYGYMREYPVERHYRD--AKLIEIGEGTSEI 366


>gi|163787861|ref|ZP_02182308.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159877749|gb|EDP71806.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 388

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 16/261 (6%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254
           AIG L +TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  I+ A+    +G
Sbjct: 121 AIGCLCITEPFGGSDVAGMRTTAVKKGDS-YIINGSKTFITNGVYSDYLIVAAKTSPELG 179

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
              +   + D    G+   +L +K+G R++ T E+ F N       ++G+ N     +  
Sbjct: 180 NKGISIFVMDRDTPGISATKL-DKLGWRASDTGEIAFDNVEIPASNIMGEENQGFPYIMQ 238

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  L  A+ S +    +L  A  Y   R   G  +     ++   AD    +     
Sbjct: 239 HFALERLVMAVNSHARAEYALEYAKQYMSERTAFGRTIDKFQALRHTYADCETQMEICKQ 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            ++ +A   D      +EA  +++ +        KMA  VI + ++ +GG GY+EE  +A
Sbjct: 299 FNYYVAKRLDMGDYVVKEATMSKLQS-------TKMADDVIYQCLQFLGGYGYMEEYPLA 351

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R  R+S    I  G G + +L
Sbjct: 352 RMARDSRLGPI--GGGTSEIL 370


>gi|17064982|gb|AAL32645.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
 gi|22136242|gb|AAM91199.1| isovaleryl-CoA-dehydrogenase precursor IVD [Arabidopsis thaliana]
          Length = 409

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K+ DG Y L+G+K W  + P ++  ++ A+ + + G   +
Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F N F   + + N+     + + +L+  
Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266

Query: 318 --LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L+  +++   +   +  L   + Y R+R   G  + +   ++  +AD+   + ++ + 
Sbjct: 267 LDLERLVLAAGPLGIVQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GYI E +  R
Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 380 LLRDAKLYEIGAGT 393


>gi|254253130|ref|ZP_04946448.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124895739|gb|EAY69619.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 395

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 24/243 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A++       + 
Sbjct: 136 FGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKLNDDGNDTIR 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL    +  K+G R++ T E+   + F     L+ ++N   GP       
Sbjct: 195 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDDVFVPEENLMPNVNGLRGP------F 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AE+  +  R++V      G  L    ++++ +AD+  +I    
Sbjct: 248 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 307

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  +
Sbjct: 308 QGVLRLGRMKDEGTAAVE-------VTSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 360

Query: 431 ARH 433
           ARH
Sbjct: 361 ARH 363


>gi|94985281|ref|YP_604645.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555562|gb|ABF45476.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 392

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++  + ++  D  + L G K W  S   +D ++++A+  G     + CF
Sbjct: 135 LTEPGAGSDAASLCLRAEREGD-EWVLHGSKAWITSGGQADTYLVMARTGGPGARGISCF 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           +VP+ +      GL + R + K+G  +  T  + F        N  G     L ++   +
Sbjct: 194 IVPKDM-----PGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQGLVIALASL 248

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A+ ++   R +L  A  YA  R   G  L +   +   +A +A  I +A
Sbjct: 249 DAGRIGI----AMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAARIESA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             ++ + A   D+ +   +EA+ A+++A  T   C +       +A++  GG+GY  E  
Sbjct: 305 RLVALKAAWLKDQGRPYGKEASIAKLLASETAVDCAR-------DAIQIFGGNGYSREYP 357

Query: 430 IARHYRESPANSILLGS 446
           + R YR++    I  G+
Sbjct: 358 VERLYRDAKVTEIYEGT 374


>gi|228914944|ref|ZP_04078549.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228844740|gb|EEM89786.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|229000130|ref|ZP_04159700.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229007651|ref|ZP_04165244.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228753602|gb|EEM03047.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228759667|gb|EEM08643.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 381

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +D +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKQGD-YYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   PVE++        
Sbjct: 188 FIVEKDTQGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     + YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKICEIYEGT 369


>gi|226939151|ref|YP_002794222.1| CaiA [Laribacter hongkongensis HLHK9]
 gi|226714075|gb|ACO73213.1| CaiA [Laribacter hongkongensis HLHK9]
          Length = 386

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 157/398 (39%), Gaps = 60/398 (15%)

Query: 85  HAYGPGGERWDKVEFHP----------AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           H   P   RWD+ E  P           +  L   + + GL  S  D +   V  + AH 
Sbjct: 22  HELAPFAARWDEEETFPLDTLRRAGEMGFLGLYTPACYGGLELSRLDSAI--VFEELAHG 79

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
             +   YL       H M      + M+A    P + + W P++ + E            
Sbjct: 80  CTSTAAYLTI-----HNMV-----SWMIASFGAPALAEAWVPRMVTGEL----------- 118

Query: 195 SVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                LG   LTE   G+D A+++++ ++  D  Y L+G K F+S   S   +++    G
Sbjct: 119 -----LGSYCLTEPGAGSDAASLSTRAERHGDH-YVLNGSKMFISGAGSTQVLVVMARTG 172

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
             G   V   +      G+ Y + + K+G  S  T  + F       +N  G        
Sbjct: 173 GPGAKGVSAFVVPADAAGVRYGKKEKKMGWNSQPTRSISFEEVSIPVANRLGEEGEGFTF 232

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   ++  +I I    A  +V   + +L  A  Y   R   G  L     ++  +AD+  
Sbjct: 233 AMKGLDGGRINI----ATCAVGTAQAALDAAQRYVGERRQFGAPLAQLQNIQFRLADMLT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D+   + E   Y      + K     +A  V  +A++C GG GY
Sbjct: 289 ELVAARQMVRLAAWQLDQ--QQPEAGCYC----AMAKRLATDLAFNVANQALQCFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461
           +++  + RH R+   + IL G+ + M L +   LL++G
Sbjct: 343 LKDFPLERHVRDLRVHQILEGTNDIMRLIIARRLLQEG 380


>gi|169629171|ref|YP_001702820.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|23573441|gb|AAN38728.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus]
 gi|169241138|emb|CAM62166.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 399

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +  R   PT    M  +     LG+TE   G+D+A
Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G   
Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R  +K+G R + T EL F +       L+G  N  +G ++ M+      L  A+ + + 
Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A  +AR R   G  L  + +++  +A++A  +  A   +  +   +   +   
Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            E +    MA  T  + C     V+ EA++  GG GY+ E  I RHYR+
Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375


>gi|52143125|ref|YP_083705.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51976594|gb|AAU18144.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|134294861|ref|YP_001118596.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134138018|gb|ABO53761.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 395

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGADAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               L+ +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PDENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|321460436|gb|EFX71478.1| hypothetical protein DAPPUDRAFT_216649 [Daphnia pulex]
          Length = 422

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 34/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++  K SD  Y ++G K W  SS ++  ++++A    + G     C
Sbjct: 164 LSEAESGSDAFSLKTRAIK-SDDHYIINGSKMWISSSEIAGVYLVMANANPKDGYKGITC 222

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+V ++    +P G+   + ++K+G R+++T  + F N       +LG+L       +  
Sbjct: 223 FIVDQI----TP-GVSIGKKEDKLGIRASSTCAVHFDNVQVPASNILGELG------QGY 271

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K  I  L+   + +    V LA+      + Y  +R   G  + D   M+  IA +A  I
Sbjct: 272 KYAIGMLNEGRIGIGAQMVGLAQGCFDATVPYTLQRTQFGKRIFDFQAMQHQIAQVATQI 331

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L +  A   +      +EAA A       KY+  ++A    ++ +E +GG G+ +
Sbjct: 332 ESARLLVYNAARLKEAGLPFVKEAAMA-------KYYAAEVATLTTSKCIEWMGGVGFTK 384

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  + + YR+    +I  G+ N  +  +   +E+
Sbjct: 385 DYPVEKFYRDCKIGTIYEGTSNIQLNTIAKYIEQ 418


>gi|312114047|ref|YP_004011643.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219176|gb|ADP70544.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 597

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/361 (20%), Positives = 145/361 (40%), Gaps = 51/361 (14%)

Query: 154 PSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P +T+   S +A   +  +   + PK+ S E+  T             + LTE   GTD+
Sbjct: 127 PGLTAGAYSAIASHASDELKALYLPKMVSGEWSGT-------------MCLTEPHCGTDL 173

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260
             + ++     DG Y ++G K F++S   D       ++LA++         V  F+VP+
Sbjct: 174 GLMKTRAVPAEDGSYTITGTKIFITSGEHDLTNNIIHLVLAKLPDAPAGSKGVSLFVVPK 233

Query: 261 LL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L  +DG P   N +    +++K+G +++AT  + F    G+L+   N     +  M   
Sbjct: 234 FLPDDDGEPGARNAVSCGSVEHKMGIKASATCVMNFDGAVGWLVAQPNQGMRAMFTMMNA 293

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIA 363
             L   I  +    ++   A+ Y + R                  LI  P +++ + +  
Sbjct: 294 ARLGVGIQGLGIAEIARQNAVIYTKERLQGRSLTGVKAPEKPADPLIVHPDVRKNLLEAK 353

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                A AL+  +    D      +A  R +      ++ P+ K +   M      +  +
Sbjct: 354 AFTEGARALAVMIGLGIDRAAHHPDAAVRQQSNDLVALLTPVIKAYYTDMGVETAIKMQQ 413

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
             GG GYI E  + +  R++  + +  G+     LD++   L + G       F+T++ +
Sbjct: 414 MFGGHGYIREHGMEQFVRDARISMLYEGANAIQALDLVGRKLPQNGGAAVRAFFATIQTE 473

Query: 476 L 476
           +
Sbjct: 474 I 474


>gi|146091267|ref|XP_001466486.1| isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5]
 gi|134070848|emb|CAM69207.1| putative isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5]
 gi|322500163|emb|CBZ35239.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 410

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 53/311 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     W PK+ + E+              +G +G++E   GTD+  +    +K S+G 
Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +  ++D F++ A+V+G++  F V R        G       +K G R++
Sbjct: 181 YVLNGSKIWITNGTVADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRAS 235

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE- 334
              +L         L D+ V   P E++          ++  L+   ++++ M V +AE 
Sbjct: 236 HMCQL--------FLEDVVV---PAENLLGEEGKGMVGMMRNLELERVTLAAMAVGIAER 284

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  YA  R   G  + +   ++R IA+   D  AA AL + ++++           
Sbjct: 285 SVELMTSYASERKAFGQPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPGNKN---- 340

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              R+ +   K +   +A  V   A++ +GG GY +   + R +R++    I  G+  A 
Sbjct: 341 ---RLGSDAAKLFATPIAKKVADSAIQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAH 397

Query: 451 VLDVLNLLEKG 461
             ++   L KG
Sbjct: 398 HKNITKDLLKG 408


>gi|126435772|ref|YP_001071463.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235572|gb|ABN98972.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 399

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +  R   PT    M  +     LG+TE   G+D+A
Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G   
Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R  +K+G R + T EL F +       L+G  N  +G ++ M+      L  A+ + + 
Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A  +AR R   G  L  + +++  +A++A  +  A   +  +   +   +   
Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            E +    MA  T  + C     V+ EA++  GG GY+ E  I RHYR+
Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375


>gi|281350594|gb|EFB26178.1| hypothetical protein PANDA_021175 [Ailuropoda melanoleuca]
          Length = 396

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 119/248 (47%), Gaps = 28/248 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D+ ++ ++  K  +  Y ++G K W  S+  +  F+++A V   +G     C
Sbjct: 162 LSEAGAGSDLFSLKTRADKKGN-YYVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITC 220

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     GL   + +NK+G R+++T  L F N     + + N+        K  
Sbjct: 221 FLVDRDTE-----GLHIGKAENKMGIRASSTCPLTFENV---KIPEANILGQIGHGYKYA 272

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  + D   ++  +A +A+ + AA
Sbjct: 273 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYMKERMQFGKRIFDFQGLQHQVAHVAIQLEAA 332

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ +E +GG GY ++  
Sbjct: 333 RLLTYNSARLLEAGQPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 385

Query: 430 IARHYRES 437
           + +++R++
Sbjct: 386 VEKYFRDA 393


>gi|193076005|gb|ABO10592.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGD-YYILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|94311467|ref|YP_584677.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355319|gb|ABF09408.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans
           CH34]
          Length = 379

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 26/264 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCF 256
           + +G+TE  GG+D+ A  +   +  D  + ++G K F+S+ MS   IML  + +   G  
Sbjct: 123 LAVGITEPGGGSDVKACRTTAVRDGDE-WVINGSKTFISNGMSADLIMLVCKTDPAAGAR 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV---- 309
            V  +L + +  G    R  +K+G  +  T EL F N     G LLG+ N   G +    
Sbjct: 182 GVSLILVETNREGFRCGRKLHKVGQPAADTAELFFDNVRVPAGNLLGEPNQGFGYLMQEL 241

Query: 310 --EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD-I 366
             E + I +Y  +A+  +  +R++L     Y + R   GG + D    K  +AD+  + +
Sbjct: 242 AQERLIIALYAATALERL--LRITL----EYVKDRKAFGGTVWDFQNTKFKLADVKANAV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  T + + L       K    EAA A++ +  T + C       I + ++  GG GY+ 
Sbjct: 296 ALRTMVDYYLGEHM-RRKLTVNEAAIAKLYSTETLWKC-------IDDMVQLHGGYGYML 347

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR + +   + ++ G+   M
Sbjct: 348 EYPIARAFTDYRVSRVVGGANEVM 371


>gi|254238116|ref|ZP_04931439.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719]
 gi|126170047|gb|EAZ55558.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719]
          Length = 596

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|311032043|ref|ZP_07710133.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 378

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ ++  K  D  Y L+G K F+++   +D +I+ A     +G   V  
Sbjct: 124 LTEPSAGSDAGSLKTRAVKQGDH-YVLNGAKVFITNGGEADTYIVFASTNPELGTKGVSA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    G    + ++K+G   + TV+L F +     +   N+     E  KI +  LD
Sbjct: 183 FIVEKDTPGFVIGKDEHKMGLHGSKTVQLTFEDA---KVPVANLLGAEGEGFKIAMANLD 239

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AE     A  YA+ R   G  +  Q  +   +AD+A  +  A  L++
Sbjct: 240 VGRIGIAAQSLGIAESAVQAATAYAKERVQFGKPIAAQQGVSFKLADMATAVEGARLLTY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R AN     K   +EA+ A++ A  T       A  V  EA++  GG GY ++  + R++
Sbjct: 300 RAANLRALGKPCGKEASMAKLFASQT-------AMNVAIEAVQVFGGYGYTKDYPVERYF 352

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 353 RDAKVCEIYEGT 364


>gi|256788690|ref|ZP_05527121.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772585|ref|ZP_06531963.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289702784|gb|EFD70213.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 383

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 131/309 (42%), Gaps = 59/309 (19%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A        + W P + S EY              +G  GLTE   G+D   +T++
Sbjct: 95  AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y ++G K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPT-----DTPGLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322
            + +  K+G R  AT EL        +L D+ V   P   M           +  L    
Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243

Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           MSV+   V +A+A     + YA  R   G  +    +++  I+DIALD+ AA  L++R+A
Sbjct: 244 MSVAAGCVGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D  +  + E++ A++ A        + A      A++  GG GYI+E    +  R++
Sbjct: 304 DLIDRGQPFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDA 356

Query: 438 PANSILLGS 446
              ++  G+
Sbjct: 357 RVMTLYEGT 365


>gi|218291431|ref|ZP_03495357.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238721|gb|EED05939.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 377

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 32/274 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           PM +       GLTE   G+D A  T     +    + ++G+K F ++     +++L  V
Sbjct: 113 PMARGEALGAFGLTEPGAGSD-AGGTRTTAVLEGDEWVITGNKIFNTNGGYAKYVVLTAV 171

Query: 250 EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
                  +  F+VP   E     G    +   K+G R++ TVEL   +       LLG L
Sbjct: 172 TDPASRGISAFIVPTDAE-----GFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPL 226

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           N         + L  LD   ++++ + V +A A     + YA+ R   G  +     ++ 
Sbjct: 227 NAGF-----KQFLSTLDGGRVAIAALAVGIARAAFETALAYAKTRVQFGQAISKFQAIQH 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ I  A     + A   D+ +  + EA+YA++ A        +M      +A++
Sbjct: 282 KLADMAMHIDLARNAVMKAAWLKDQGRPYTLEASYAKLFA-------SEMCTRTCEQAIQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +GG GY+ E  + RHYR+  A  I +G G + +
Sbjct: 335 ILGGYGYMREYPVERHYRD--AKLIEIGEGTSEI 366


>gi|83748989|ref|ZP_00945997.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|83724327|gb|EAP71497.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
          Length = 419

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y L+G K W  +
Sbjct: 137 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 195

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+   + F 
Sbjct: 196 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 254

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353
             + + N+  G          L+SA   ++   +  AE+  +  R++V       +P   
Sbjct: 255 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAA 312

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 313 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 365

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 366 ARMARDMLGGNGISDEFGVIRH 387


>gi|302868235|ref|YP_003836872.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302571094|gb|ADL47296.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 384

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 19/257 (7%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255
           AI   LTE+  G+D A I +  ++   G + L G K ++ +   S  +++ A  + + G 
Sbjct: 122 AISFALTEEGAGSDAARIRTTAEREGAG-WRLRGEKIYIGNGGASRYYVVFALTDPQAGT 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLN----VSTGPV 309
             +   L D   +G+   R ++K+G R   T  L+       G +LGDLN    ++   +
Sbjct: 181 RGITAFLVDKDADGVVIDRYEDKMGIRGTLTSNLKLDTWVPDGDVLGDLNRGMRLAMQTL 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I +   S  ++++G  V+  EA     RR   G  +ID   +   +AD+A  I AA
Sbjct: 241 SAGRISVAAQSLGVALAGFDVASREAA----RRETFGRPIIDNQGISFPLADVATGITAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             ++F       EA    +E     I+  + K +  ++A   +  A++  GG G+ +   
Sbjct: 297 RMITF-------EAARTHQEGGDVGILGAMAKLYASEVAHRAVDTAVQVFGGDGFCKPCP 349

Query: 430 IARHYRESPANSILLGS 446
             R YR+     I  G+
Sbjct: 350 AERLYRDQRILEIYEGT 366


>gi|228927410|ref|ZP_04090467.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832306|gb|EEM77886.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|228985439|ref|ZP_04145597.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228774293|gb|EEM22701.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|239813819|ref|YP_002942729.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239800396|gb|ACS17463.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 598

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 158/376 (42%), Gaps = 64/376 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL+   T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALVAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258
           D+  + ++ +  +DG Y ++G+K F+S+    M+D  I  +LA++    +G  G   F+V
Sbjct: 175 DLGLLRTKAEPQADGSYRITGNKIFISAGEHDMADNIIHLVLARLPDAPKGSKGISLFVV 234

Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+  +  DGS    N +    L++K+G   NAT ++      G L+G+ N          
Sbjct: 235 PKYKVKADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGSLVGEPNKGL-----QA 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQ---PVMKRAIAD 361
           + + +++A + V    + L E     A+ YA+ R     +SG    D+   P++      
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVR 349

Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             L  A A A   R    F            + K R +      ++ PI K +       
Sbjct: 350 KMLLTAKAYAEGGRALQIFCTMLLDKEHHHPDEKVRKDSGELVALLTPIVKAFITDNGHI 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465
                M+  GG G+I+E  + +  R++  N I  G+     LD+L     G N      F
Sbjct: 410 ATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKF 469

Query: 466 EQLFSTLEQDLGSSGK 481
            +L + L ++ G + K
Sbjct: 470 GKLVAKLVEEEGVNEK 485


>gi|196043510|ref|ZP_03110748.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|229184564|ref|ZP_04311766.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|196025819|gb|EDX64488.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|228598881|gb|EEK56499.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|94501688|ref|ZP_01308203.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94426175|gb|EAT11168.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 601

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 37/300 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 167 LTEPHCGSDLGILKTKAEPNADGSYSISGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 226

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + EDGS    N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 227 KGISLFIVPKFNVAEDGSVADRNAVVCGSIEHKMGIHGNATCVMNFDGAKGYLIGPENKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        + +A+   +    S   A+ YA+ R              +   +I  P
Sbjct: 287 LNCMFTFMNTARIGTALQGATAAEGSYQGALAYAKDRLAMRSLTGPKAPEKAADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYAR-----IMAPITKYWCCKM 407
            ++R +           AL +  A   D   K  SEE   A       + PI K +  ++
Sbjct: 347 DVRRMLLTQKAFAEGGRALVYLAAQQNDIVHKGESEEERKAADELLGFLTPIAKAFLTEV 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                   ++  GG G+I E  + +  R++  ++I  G+     LD+L    L+ +G +L
Sbjct: 407 GCEATNLGVQVFGGHGFIAEWGMEQLVRDAKISTIYEGTTGIQALDLLGRKVLMSQGQSL 466


>gi|49479443|ref|YP_036455.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196033753|ref|ZP_03101164.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|196039887|ref|ZP_03107190.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|228933642|ref|ZP_04096492.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945958|ref|ZP_04108300.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229121901|ref|ZP_04251120.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|49330999|gb|AAT61645.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|195993433|gb|EDX57390.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|196029146|gb|EDX67750.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|228661550|gb|EEL17171.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228813706|gb|EEM59985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826102|gb|EEM71885.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|88704121|ref|ZP_01101836.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701948|gb|EAQ99052.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 586

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 27/282 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQV----E 250
           + LTE   G+D+  + ++     D  Y +SG K +++    DA      ++LA++    E
Sbjct: 163 MNLTESGAGSDLGVMKTRAVPNGD-HYLISGQKIYITWGDHDAVDNIVHLVLAKLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           G  G   FLVP+ L +     G  N +     ++K+G   + T  + F +     G+L+G
Sbjct: 222 GSSGISLFLVPKFLVNADGSLGERNDVYPVSTEHKLGIHGSPTCVMAFGDDGGAVGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAI 359
           + N     +  M     L   +  +     +  +A+ YA+ R V GG+ +I+ P +KR +
Sbjct: 282 EENRGLTCMFTMMNEARLKVGLQGLGASEGAYQQALAYAKER-VQGGVPIIEHPDVKRML 340

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEE---AAYARI--MAPITKYWCCKMAPAVIAE 414
             +     A  AL++  A + D A    E    A+ ARI  M P+ K W  ++   + + 
Sbjct: 341 LTMKALNEAMRALAYSEAVTMDLAHYGPESDRVASQARIDLMIPVIKGWMTEVGVELTSL 400

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++  GG GY+EE   A++ R+     I  G+      D++ 
Sbjct: 401 GVQVHGGMGYVEETGAAQYLRDVRITPIYEGTNGIQAADLVG 442


>gi|326577417|gb|EGE27301.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis O35E]
          Length = 509

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 139/330 (42%), Gaps = 50/330 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRS-EEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + L+   D  AK  S  E  +A     ++ PITK +  + 
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGESPSEVKFADEMLSLLTPITKAFLTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                   ++  GG GYI E  + ++ R++  + +  G+     LD+L            
Sbjct: 404 GLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLLG----------- 452

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKED 497
                 + LGS G+ +    +     C+E+
Sbjct: 453 -----RKVLGSQGRMLANFTKIIHKFCQEN 477


>gi|260433872|ref|ZP_05787843.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417700|gb|EEX10959.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 380

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++ +DG Y L+G K F+S    SDA++ + +  G     +   
Sbjct: 124 LTEPGSGSDAAALKTRAERTNDG-YTLNGTKAFISGGGYSDAYVCMVRTGGDGPKGISTV 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            +EDG+P GL +  L+ K+G +S  T +++F +     +   N+     +  K  ++ LD
Sbjct: 183 YVEDGTP-GLSFGALEQKMGWKSQPTAQVQFDDC---KIPAENLVGTEGDGFKYAMMGLD 238

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+A     + Y   R   G  +     ++  +AD+ +++ AA     
Sbjct: 239 GGRLNIASCSLGAAQAGLDMTLQYMSERKAFGQTIDQFQALQFRLADMEIELQAARTFLR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D+       A  A     + K +  +    V+ + ++  GG GY+ +  I +  
Sbjct: 299 QAAWKLDQG------APDATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLV 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDLRVHQILEGTNEIM 368


>gi|188577058|ref|YP_001913987.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae
           pv. oryzae PXO99A]
 gi|188521510|gb|ACD59455.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae
           pv. oryzae PXO99A]
          Length = 382

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++   +L     V     E  +  +  
Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + ++   EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|58581642|ref|YP_200658.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188577120|ref|YP_001914049.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58426236|gb|AAW75273.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521572|gb|ACD59517.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 597

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 55/339 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348
              P + ++ +   +++A +SV    + L+E     A+ Y R R  S  +          
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338

Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
             +I  P ++R +  I      +  LS   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSIS 492
                G  LF     T    QD  ++  + I  LRD  S
Sbjct: 459 TSQAAGLKLFLTDVDTFANAQDGNAALAEFIKPLRDKCS 497


>gi|317507483|ref|ZP_07965209.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
 gi|316254221|gb|EFV13565.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
          Length = 611

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 43/296 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++     DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAALQPDGTWHIEGVKRFITSATSDDVFENIFHLVLARPEGAKAG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+   D      G  NG+    +++K+G +++ T EL F        G+L+
Sbjct: 224 TKGLSLFFVPKWHYDFTTRTKGERNGVFVTNVEHKMGIKASTTCELTFGQHGVPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +   I S+S +  +   A+ +A+ R V G             
Sbjct: 284 GEVHDGIAQMFDVIENARMMVGIKSISTLSTAYLNALEFAKER-VQGQDMTQMLNKEAPK 342

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARIMAPI 399
             ++  P ++R++ +         AL    A   D A +       ++ AY     + P+
Sbjct: 343 VTIVHHPEVRRSLLEQKAYAEGLRALYLLTATYQDAAAAERLFGADKDLAYRVNDFLLPL 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            K    +   A +A+A++  GGSG++++  I ++ R++  +++  G+     LD L
Sbjct: 403 VKGVGSEQGYAHLADALQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQALDFL 458


>gi|153833122|ref|ZP_01985789.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01]
 gi|148870552|gb|EDL69460.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01]
          Length = 384

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA   +  V   + PK+ + ++                LG   LTE   G+D A++T+ 
Sbjct: 96  MVASFASEEVKDAFCPKLITGDF----------------LGSYCLTEPNAGSDAASLTTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  D  Y L+G K F+S    +D  +++A+  G  G   V   +      G+ Y R +
Sbjct: 140 ATKQGDN-YILNGGKTFISGAGDTDVLVVMART-GDAGAKGVSAFVVPADAEGISYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            K+G  S  T  + F N       LLG+     G V  MK L    ++ A  SV   + +
Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D          
Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +   V  +A++  GG GYI+E  + R++R+   + IL G+   M 
Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|332262574|ref|XP_003280337.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 1 [Nomascus leucogenys]
          Length = 412

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|226361662|ref|YP_002779440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240147|dbj|BAH50495.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 397

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 41/267 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------- 252
           L+E   G+D+A I+ +  +  D  + ++G K W   +  +D  ++ A+ +          
Sbjct: 132 LSEAEAGSDVANISCRATRDGDD-WVVNGTKMWCTYADEADYLVLFARTDPHKDPAKPHR 190

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLL 299
            +  FL+ +    G P G+   +++ KIG    +T EL F N              GF L
Sbjct: 191 GISAFLIDKQ-RGGFPEGISGTKIR-KIGYFGWSTWELSFDNFRVPATAMLGEEGKGFYL 248

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               +  G            +A  ++   R +L ++I Y   R   G  L D   ++  +
Sbjct: 249 AVSGLEVGRAH---------TAARAIGLARGALEDSIAYLHTRRQFGHELADFQHLRFKV 299

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +A DI AA  L + +A   D  +  S EA+  +++A        +MA  V +EA++  
Sbjct: 300 AKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKLVA-------TEMAERVTSEAVQIH 352

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY  +  + RH+R++    I  G+
Sbjct: 353 GGAGYTTDFQVERHWRDARLTKIFEGT 379


>gi|254462842|ref|ZP_05076258.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206679431|gb|EDZ43918.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 379

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----VEGRVGC 255
           L +TE  GG+D+ AI ++  K  +  Y L+G K F+++      I++A      EG  G 
Sbjct: 122 LAMTEPSGGSDVQAIKTRAIKEGNS-YKLNGQKTFITNGQHANLILVAAKTNPAEGSKGT 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVED 311
            LV  +LE     G    R  +KIG  +  T EL F N        L G+ N+  G  + 
Sbjct: 181 SLV--ILETEGAEGFARGRNLDKIGAHAADTSELFFDNVDIPAENILGGEENL--GFYQM 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L    L     +V  M  ++A  I Y + R   GG ++     +  +A+       A
Sbjct: 237 MQQLPQERLIIGCGAVGAMEGAVARTIEYCKERQAFGGPIMQFQNTRFKLAECQTKTTVA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A         DE  S   +       A + KYW  +    V+ E ++  GG G+++E +
Sbjct: 297 RAF-------LDECISEHLKGELTVEKAAMAKYWLTETQGEVLDECLQLHGGYGFMQEYA 349

Query: 430 IARHYRESPANSILLGSGNAM 450
           +A  + ++    I  G+   M
Sbjct: 350 VAEMWTDARVQRIYGGTNEIM 370


>gi|83593283|ref|YP_427035.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576197|gb|ABC22748.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ ++  D  + L+G K W  + P +D  ++ A+ +  +    +
Sbjct: 128 LAMSETGAGSDVVSMRTRAERRGD-TFVLNGSKMWITNGPDADVLVVYAKSDPDLKSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     +   NV  G  E +K+L+  
Sbjct: 187 TAFIVEKGWKGFTTGPKLDKLGMRGSNTGELVFEDCE---VPAENVLGGVGEGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++G  + + EA     + Y   R   G  +    +M+  +AD+   + A  A 
Sbjct: 244 LDYERLVLAGGPLGIMEACLDAVLPYVHERQQFGRAIGSFQLMQGKLADMYTTLCACKAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  K+ S++AA A + A     W       +  EA++C+GG+GYI +    R
Sbjct: 304 VYAVAQACDRGKATSKDAAGAILFAAEKATW-------MALEAIQCLGGNGYINDYPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|41410312|ref|NP_963148.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399146|gb|AAS06764.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 386

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 36/372 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQ 145
           P    WD  E  P    +LR S   G+  +I+ R  E V      ++   R++    +A 
Sbjct: 25  PHALEWDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIAD 79

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+    TP   K W P++ + +             V     LTE 
Sbjct: 80  PTTAAFLSIHNMCAWMIDSYGTPEQRKAWVPRLAAMD-------------VIASYCLTEP 126

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +   G Y L G K F+S +  SD ++++A+  G     +   ++E 
Sbjct: 127 GAGSDAAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEK 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
           GS  GL +   + K+G  +  T ++            L  + G      I +       L
Sbjct: 186 GSA-GLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A 
Sbjct: 245 NIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAG 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D       E      +  + K +       V  +A++  GG GY+ E  + +  R+  
Sbjct: 305 ALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLR 358

Query: 439 ANSILLGSGNAM 450
            + IL G+   M
Sbjct: 359 VHRILEGTNEIM 370


>gi|326569434|gb|EGE19494.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC8]
          Length = 559

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFMNVALLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRS-EEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + L+   D  AK  S  E  +A     ++ PITK +  + 
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGESPSEVKFADEMLSLLTPITKAFLTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG GYI E  + ++ R++  + +  G+     LD+L
Sbjct: 404 GLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLL 451


>gi|229196565|ref|ZP_04323309.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228586921|gb|EEK44995.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|254515219|ref|ZP_05127280.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219677462|gb|EED33827.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 586

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 29/283 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQV----E 250
           + LTE   G+D+  + ++     D  Y ++G K +++    DA      ++LA++    E
Sbjct: 163 MNLTESGAGSDLGVMKTRAVPQGD-HYLITGQKIYITWGDHDAVDNIVHLVLAKLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           G  G   FLVP+ L +     G  N +     ++K+G   + T  + F +     G+L+G
Sbjct: 222 GSSGISLFLVPKFLVNADGSLGERNDVYPVSTEHKLGIHGSPTCVMAFGDEGGAIGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKR-- 357
           + N     +  M     L   + S+     S   A+ YA+ R V GG+ +I+   +KR  
Sbjct: 282 EENRGLACMFTMMNEARLKVGLQSLGATEGSYQLALAYAKDR-VQGGVPIIEHADVKRML 340

Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
               A+++    +A + A++  LA+  DEA+ R+   A   +M P+ K W  ++   + +
Sbjct: 341 LTMKALSEAMRALAYSEAVTMDLAHYGDEAE-RTAAQARIDLMIPVIKGWMTEVGVELTS 399

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++  GG GY+EE   A++ R+     I  G+      D++ 
Sbjct: 400 LGVQVHGGMGYVEETGAAQYLRDVRITPIYEGTNGIQAADLVG 442


>gi|207744057|ref|YP_002260449.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206595459|emb|CAQ62386.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 397

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+   + F 
Sbjct: 174 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353
             + + N+  G          L+SA   ++   +  AE+  +  R++V       +P   
Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAA 290

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365


>gi|118477758|ref|YP_894909.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|225864317|ref|YP_002749695.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|118416983|gb|ABK85402.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|225789193|gb|ACO29410.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|58581699|ref|YP_200715.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426293|gb|AAW75330.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 439

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 180 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 239

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++   +L     V     E  +  +  
Sbjct: 240 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 296

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 297 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 356

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + ++   EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 357 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 409

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 410 YFRDAKITEIYEGT 423


>gi|21242313|ref|NP_641895.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107744|gb|AAM36431.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 382

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFLINGKKSWITSGPVAKYIVLFAMTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|301060097|ref|ZP_07200967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300445799|gb|EFK09694.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 387

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 34/291 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T  + + + PK+ S EY               G G+TE   G+D+ A+ S  Q   D  +
Sbjct: 104 TDDIKEKYIPKLVSAEY-------------MGGFGITEPNAGSDVMAMKSTAQDKGDH-W 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K W  ++ ++D  I  A  +    G  L   ++E  + NG+    L +K+G+RS+
Sbjct: 150 LINGSKTWISNTSVADVLIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSS 208

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
            T E+   +T    +   N+   P +  KI+   L+   +S +   + LA+A       Y
Sbjct: 209 PTGEIYLEDT---KVPKENILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAATSY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397
            + R   G  +    + +  +  I  ++ AA  + ++ A   D+     + E A A    
Sbjct: 266 CQEREQFGKSIGQFQMNQDMVGQITSELEAARLVVYKAAWQKDQGNLGNTLEVAQA---- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              KY   ++A      AM+ +G  GY  E  +AR+YR++P   ++ GS N
Sbjct: 322 ---KYVAGEIAVKASQVAMKILGAYGYSTEYPVARYYRDAPTYQLVEGSTN 369


>gi|300787183|ref|YP_003767474.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299796697|gb|ADJ47072.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 386

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 36/310 (11%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +H+       S E       P         + +TE   G+D+AA+T++  +  D 
Sbjct: 94  MATPSLHR-----YGSEELKQRYLVPAISGEAVCAVAVTEPDTGSDVAALTTRAVRDGDD 148

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + ++G K ++++   +D   +LA+       G  G  L   ++   +P G    R  +K
Sbjct: 149 -WVINGSKAYITNGTQADWICLLARTSDKPAGGGAGVGLSQIIVPADTP-GFHVSRKLDK 206

Query: 279 IGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329
           +G RS+ T EL F+       NT G       +  G  + M       L     +V GM 
Sbjct: 207 LGMRSSDTAELTFTDARVPVANTIG------EIDLGFYQQMSQFQNERLAMGYAAVGGME 260

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L     Y + R V G  LID   +   +A+++  +      ++  A    EA  R E+
Sbjct: 261 TALTRTADYLKTRKVFGKPLIDNQHLAFTLAELSARLDVLRHYNYAAA----EAYIRGED 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K    ++A  + A  ++  G  GY+EE   AR++R+SP  SI  G  + 
Sbjct: 317 V---NRFATVGKLEAGRLAREISATCLQFHGAIGYMEEMWTARYFRDSPVWSI-GGGADE 372

Query: 450 MVLDVLNLLE 459
           ++L VL+ L+
Sbjct: 373 VMLYVLSRLD 382


>gi|300784058|ref|YP_003764349.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793572|gb|ADJ43947.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 378

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 23/270 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           LTE   G+D   +TS+  +  D  Y LSG K F++ +P+++ F+  A+ +        + 
Sbjct: 122 LTEAEAGSDPGGLTSRAVRDGD-RYRLSGTKRFITNAPLAEVFVAFARTDPESTGSHGIS 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLVP     G+P G+       K+G     T E+ F +       L+G+     G    
Sbjct: 181 AFLVP----AGAP-GVTVGPHDAKMGQAGAWTSEVVFDDVELAADTLVGEEGKGFGIAMA 235

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A + V     +LAEA+ YAR     G ++ +  +++  +A+   ++AA  A
Sbjct: 236 SLARGRLHIAALCVGLAERALAEAVEYARTARQGGRVIGEYQLVQALLAESHAELAAGRA 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A  +D  + R       ++     K +C +M   V   A++  GG+GY+   ++ 
Sbjct: 296 MVHEAAAKYDSGEDR-------KLGPSSAKLFCTEMLGRVADRAVQVHGGTGYVRGVTVE 348

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R YR++    I  G+     L +   L KG
Sbjct: 349 RIYRDARLFRIYEGTSEIQKLVIARQLLKG 378


>gi|285018539|ref|YP_003376250.1| acyl-CoA dehydrogenase oxidoreductase [Xanthomonas albilineans GPE
           PC73]
 gi|283473757|emb|CBA16260.1| putative acyl-coa dehydrogenase oxidoreductase protein [Xanthomonas
           albilineans]
          Length = 382

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 30/277 (10%)

Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           ++A  QK   AI  G       LTE + G+D  A+  +     DG + ++G K W  S P
Sbjct: 103 DEAQKQKYVRAIAQGEQIGAFALTEPQSGSDATAMRCRAVPRDDGSFVINGKKSWITSGP 162

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
           ++   ++ A  E   G   +   + D    G    + + K+G R++AT E+EF +   T 
Sbjct: 163 VAKYIVLFAMSEPERGARGITAFVIDTDKPGFHRGKTEPKLGIRASATCEIEFQDYHATA 222

Query: 296 GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349
             +LG       P E  KI +  LD+  + ++   + LA A +     Y + R   G  +
Sbjct: 223 DEVLGT------PGEGFKIAMSVLDAGRIGIASQAIGLARAAYQATLGYVKERKAFGSPI 276

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               + +  +AD+   + AA  L+ R A    + +  + EA+ A++ A     W      
Sbjct: 277 GAFQMTQAKVADMKCKLDAALLLTLRAAWLKGQGQQFTTEASVAKLTASEAAMW------ 330

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  +A++  GG GY +E  + R++R++    I  G+
Sbjct: 331 -ITHQAVQIHGGMGYSKEMPLERYFRDAKITEIYEGT 366


>gi|228952672|ref|ZP_04114746.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228806948|gb|EEM53493.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST 471
           L V  +L K     EQL  T
Sbjct: 403 LTVAKMLMKQ---IEQLEDT 419


>gi|221633320|ref|YP_002522545.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221156735|gb|ACM05862.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 408

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 128/283 (45%), Gaps = 35/283 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P++ + EY                  LTE   G+D+AA+ ++ ++  D +Y L+GH
Sbjct: 124 RRWLPRLAAGEY--------------ASFALTEPDAGSDVAALATRAERCGD-VYVLNGH 168

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  ++P++  F++ A+ + + G   +   + +    G+  + L+ K+G R+ +  E+E
Sbjct: 169 KRWIGNAPIASFFVVFAKTDPQAGHNGISVFVVERESTGIVTRPLR-KLGQRAISNGEIE 227

Query: 291 FSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           F +         G       ++   +   + ++    A      +R  L E++ YA++R 
Sbjct: 228 FHDVVVPANQRIGREGEGFAIAMQTLRRTRPMV----AAFGAGIIRRCLDESLAYAQQRR 283

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +I    +   +AD+ + + AA  L++  A   D+ +  +  AA A+  A  +  W
Sbjct: 284 TMGQPIIRHQAIGHKLADMQIRLEAARQLTYLAAWLADQGEDNTMAAAVAKAFAADSAMW 343

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                     EA++  GG+GY  +  + + +R++    I  G+
Sbjct: 344 AA-------TEAVQVFGGNGYSPDYPVEKLFRDAKLLQIYEGT 379


>gi|154686272|ref|YP_001421433.1| YngJ [Bacillus amyloliquefaciens FZB42]
 gi|42491133|emb|CAE11270.1| YngJ protein [Bacillus amyloliquefaciens FZB42]
 gi|154352123|gb|ABS74202.1| YngJ [Bacillus amyloliquefaciens FZB42]
          Length = 380

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
            GLTE   G+D     ++ +K   G Y ++G K ++++      +++  V G+   G  +
Sbjct: 123 FGLTEPNAGSDAGGTQTKAEK-KGGDYVINGEKCWITNANYARTVIVTAVTGKNSAGKPI 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  L+      G       +K+G R + T EL   +       LLGD      P +  K 
Sbjct: 182 ISALIVPTDTPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGD------PEKGFKQ 235

Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +Y LD   +S++ + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  
Sbjct: 236 FLYTLDGGRISIAALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDL 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  + A   D+    ++EAA+A++       +  +MA     +A++  GGSGY++E 
Sbjct: 296 ARQMVLKAAWLKDQNLPFTKEAAFAKL-------YASEMAVRTCLQAIQIHGGSGYMKEC 348

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            + R  R+  A  + +G G + +
Sbjct: 349 GVERMLRD--AKLMEIGEGTSEI 369


>gi|309774765|ref|ZP_07669787.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917450|gb|EFP63168.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 634

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE   G+D AA T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AAGTETTAVLEGDHYILNGGKIFITNADKADTYVVFAS 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 172 TNPDMGTRGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q V+   +AD+
Sbjct: 229 GQGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYAKERVQFGKPIAQQQVISFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A    E K   E       MA   K +   +A  +  +A++  GGS
Sbjct: 289 ATKLRCARMLIYSSA----ELKENHEPYGMESAMA---KQYASDVALEICNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|207728208|ref|YP_002256602.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206591453|emb|CAQ57065.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 397

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+   + F 
Sbjct: 174 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353
             + + N+  G          L+SA   ++   +  AE+  +  R++V       +P   
Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRTQFGRPLAA 290

Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365


>gi|10580725|gb|AAG19565.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 340

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 125/274 (45%), Gaps = 35/274 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+      +G  ++E   G+D+A++++  +K  D  + + G+K W  +  + D F++L +
Sbjct: 71  PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGD-EWIIDGNKMWITNGSVGDYFVVLCR 129

Query: 249 VE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGF 297
            +    GR   F   +++ +   +G   +++  K+G R++ T EL          N  G 
Sbjct: 130 TDPDASGRYEGF--SQIVVESDRDGFTAEKITGKLGIRASDTAELVLDAVRVPEENLIGT 187

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             G           ++++ + D    +V+   V +A      A+ YA+ R   G  + D 
Sbjct: 188 RGGGF---------LQLMQFFDETRTTVAAQGVGIARGATERALAYAQEREQFGQPVADF 238

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A++     AA  L+ + A S D    R ++      +A + K +  ++A  V 
Sbjct: 239 QAIQHKLAEMQTKTEAARTLTRKSAWSVDH---RDDQLT---ALASMAKSFASRIAVEVA 292

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            EA++  GG+GY+ +  + R YR++    +  G+
Sbjct: 293 DEAVQIHGGAGYVNDFDVERFYRDAKITQLYEGT 326


>gi|107104289|ref|ZP_01368207.1| hypothetical protein PaerPA_01005363 [Pseudomonas aeruginosa PACS2]
 gi|254243932|ref|ZP_04937254.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192]
 gi|126197310|gb|EAZ61373.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192]
          Length = 596

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|225182056|ref|ZP_03735487.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167269|gb|EEG76089.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 381

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 39/306 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S EY              +G   LTE   G+D +A+ +  ++  D  
Sbjct: 103 TEEQKQKYVPKLASGEY--------------VGAFALTEPGAGSDASALRTSAKRDGDD- 147

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+S+   +  + + A V+   G   +   L +    G     ++ K+G  ++
Sbjct: 148 YVLNGTKIFISNGGHAQVYTVFATVDKGQGTKGITAFLVEKDTPGFKVGAIEKKMGLNAD 207

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EA 335
            T EL F +        LG         E  KI +  LD   + +    + +A     EA
Sbjct: 208 VTTELVFEDCRIPASQRLGKEG------EGFKIAMSLLDGGRIGIGAQGLGIAQAAYDEA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  + +   +   +AD+A +I AA  L +       +A  R E       
Sbjct: 262 LKYAQFREQFGQPIFNNQAIAFKLADMATEIEAARLLVY-------QAAFRKENGLPNGK 314

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K++    A  V  EA++ +GG GY  E  + R  R++    I  G+     L + 
Sbjct: 315 QASMAKFYATDTAMKVTTEAVQVLGGYGYSREYPVERLMRDAKITQIYEGTNQIQRLVIS 374

Query: 456 NLLEKG 461
             +EKG
Sbjct: 375 KAIEKG 380


>gi|297195580|ref|ZP_06912978.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721403|gb|EDY65311.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 390

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257
           L+E   G+D A++ ++  +  D         W     ++D + +LA+  VEG  G   FL
Sbjct: 133 LSEPASGSDAASLRTKAVRDGDDWVVTGTKAWITHGGVADFYTVLARTGVEGPRGITAFL 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T +L F    G  + D        +   I L 
Sbjct: 193 VP-----GDAPGLNPAVPEKKMGMKGSPTAQLHFD---GVRIPDSRRIGEEGQGFAIALS 244

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  A
Sbjct: 245 ALDSGRLGIAACAIGVAQAALDEALGYATGRKQFGRPIADFQGLRFMLADMATRIEAGRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S +AA A       K +C   A +V  +A++ +GG GY ++  + 
Sbjct: 305 LYLAAARLRDAGRPFSRQAAMA-------KLFCTDAAMSVTTDAVQVLGGYGYTQDFPVE 357

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I+ G+
Sbjct: 358 RFMREAKVLQIVEGT 372


>gi|307296301|ref|ZP_07576128.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
 gi|306878103|gb|EFN09326.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
          Length = 403

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 32/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEG------RVG 254
           L+E   G+D++ IT Q ++  D  + ++G+K++ +      FI +L ++EG      +  
Sbjct: 131 LSEPGTGSDLSGITCQARRDGD-HWVITGNKYWCTYADGANFIRVLCRLEGEDEPSGKAK 189

Query: 255 CFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT-----------FGFLLGDL 302
             ++P     G  P G+    +  KIG     T EL F +             G+  G +
Sbjct: 190 TAIIPVEKPAGQLPEGVTGNPIP-KIGYYGWKTWELRFEDVRVPIQSTDEAPLGYGGGGV 248

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N +   +     L    +A  S+   R +L +AI YA+ R   G  + D   ++  IA +
Sbjct: 249 NAAAQSLS----LARAHTAARSIGLARGALEDAIAYAKDRVQFGQPISDFQAIRFKIATM 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  L   +    D  ++        R+   + KY+  +MA  V +EA++  GGS
Sbjct: 305 ATEVEAARQLLHYVCAEIDAGRAE-------RVHTSMVKYFAAEMAERVTSEALQIHGGS 357

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY    ++ RH+R++    I  G+
Sbjct: 358 GYTTLHAVERHWRDARLTKIFEGT 381


>gi|260557633|ref|ZP_05829847.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408806|gb|EEX02110.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSNAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|255595297|ref|XP_002536273.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223520232|gb|EEF26111.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 367

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 26/279 (9%)

Query: 168 PRVH--KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           P VH   D   +   +++ P   +   +  +AI    TE   G+D A + +  ++  D  
Sbjct: 81  PGVHIIVDHGSEALKKKWLPEIASGRSRNCIAI----TEPHAGSDAARMLTSARREGDH- 135

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+S+   + +  +LA  +   G   +   L D +  G    R    +G   +
Sbjct: 136 YVLNGTKTFISNANHAHSITVLASTDRAAGKHGISAFLLDTTTPGFEVARTMPTMGWMDD 195

Query: 285 ATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           +  E+ F++       LLG+    L+ +   + + +    L+    ++   +++L E I 
Sbjct: 196 SLCEITFTDCRIPVENLLGEEGRGLSYAMSGLNEGR----LNVGCQALGPAQIALDETIE 251

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +AR R   G  L +   ++  IAD+A+D+ AA  + F       EA  R+     AR+ A
Sbjct: 252 HARTRVTFGQALAEHQAIQHMIADMAMDLHAARMVLF-------EAVWRATRGEDARMKA 304

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + K  C + A  +  +A++  GGSGY     + R YR+
Sbjct: 305 SMVKVICTEAACRIADKALQIFGGSGYCRGTIVERVYRD 343


>gi|289670077|ref|ZP_06491152.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 382

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|226360658|ref|YP_002778436.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226363908|ref|YP_002781690.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239143|dbj|BAH49491.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242397|dbj|BAH52745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 384

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 45/375 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G+   I+ R  E V   +  ++ AAR++   QL  
Sbjct: 25  PHAVEWDQTKHFPV--DVLRKAASLGMG-GIYVR--EDVGGSELTRVDAARIF--EQLAK 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207
           G    PS+ +   +  M T      W    F  E       P       +G   LTE   
Sbjct: 78  G---CPSIAAYISIHNMVT------WMIDRFGTEEQRHQWVPRLCAMDQLGSYCLTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGR---VGCFLVPRLL 262
           G+D AA++++  +  D  + L+G K F+S +  S+ ++++A+  EG    +  F+VP+  
Sbjct: 129 GSDAAALSTRAVRDGDD-FVLNGVKQFISGAGTSEVYVVMARTGEGGPRGISAFIVPK-- 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKIL 315
                 GL +   + K+G  +  T ++ F       +N  G   G   ++   +   ++ 
Sbjct: 186 ---ESAGLSFGPNEVKMGWNAQPTRQVIFEDVRVPAANLLGSEGGGFRIAMAGLNGGRLN 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           I    A  SV G + +L +A+ Y   R   G  L+D   ++  +AD+  ++ AA  L +R
Sbjct: 243 I----AACSVGGAQTALDKAVAYLADRKAFGAALLDSQALQFQLADMRTELEAARTLLWR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + +E      E      +  + K +       V   A++  GG GY+ E  I +  R
Sbjct: 299 AAAALEEGAPDVVE------LCAMAKRFATDTGFEVANRALQLHGGYGYLAEYGIEKIVR 352

Query: 436 ESPANSILLGSGNAM 450
           +   + IL GS   M
Sbjct: 353 DLRVHQILEGSNEIM 367


>gi|152996282|ref|YP_001341117.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150837206|gb|ABR71182.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 589

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 53/336 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+ +   ++L  +  +   + PK+ + E+  T             + LTE   G+D+AAI
Sbjct: 129 SLGAIEAISLHASAELKNLYLPKMLAGEWAGT-------------MNLTEPAAGSDLAAI 175

Query: 215 TSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFLVPR-L 261
             +     D ++ + G K F++     MSD  I L           V+G +  F+VP+ +
Sbjct: 176 ACKATPDGD-VFRIKGQKIFITWGDHQMSDNIIHLVLARLPNAPDGVKG-ISLFIVPKFI 233

Query: 262 LED-GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
           L D G P   N +    +++K+G  ++ T  + F +     G+L+G  N     ++ M  
Sbjct: 234 LNDLGEPAHRNDVQVVSVEHKMGIHASPTCVMSFGDKEGAVGYLVGQENEG---IKAMFT 290

Query: 315 LIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIAL 364
           ++      + + G+ +S     +A+ YA+ R     +       +I+ P + R +  +  
Sbjct: 291 MMNNARQGVGLQGLAISERAYQQALAYAKERKQGMNVERTARAAIIEHPDVLRMLMTMKS 350

Query: 365 DIAAATALSFRLANSFDE---AKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECI 419
            I A  +L +  A   D    A    ++ A AR  +  PI K W  + A  + + A++  
Sbjct: 351 QIDAMRSLIYVAAVENDMSHLASGDDQQQAIARTALYTPIVKGWITEQAQEITSLAVQVH 410

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG G+IEE  +A+H R++    I  G+     +D++
Sbjct: 411 GGMGFIEETGVAQHARDARILPIYEGTNGIQAIDLI 446


>gi|73544305|ref|XP_848047.1| isovaleryl-coA dehydrogenase [Leishmania major strain Friedlin]
 gi|321438401|emb|CBZ12155.1| putative isovaleryl-coA dehydrogenase [Leishmania major strain
           Friedlin]
          Length = 410

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 43/282 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     W PK+ + E+              +G +G++E   GTD+  +    +K S+G 
Sbjct: 135 SPEQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +  ++D F++ A+V+G++  F V R        G       +K G R++
Sbjct: 181 YVLNGSKIWITNGSVADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRAS 235

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
              +L   +       LLG+     G V  M+    L+   ++++ M V +AE       
Sbjct: 236 HMCQLFLEDVVVPAENLLGE--EGKGMVGMMR---NLELERVTLAAMAVGIAERSVELMT 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARI 395
            YA  R+  G  + +   ++R IA+   D  AA AL + ++ N   + K+R    A    
Sbjct: 291 SYASERNAFGQPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNKNRLGSDAAKLF 350

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             PI K         V   A++ +GG GY +   + R +R++
Sbjct: 351 ATPIAK--------KVADSAIQVMGGMGYSKGMPVERLWRDA 384


>gi|307610654|emb|CBX00242.1| hypothetical protein LPW_19871 [Legionella pneumophila 130b]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 36/281 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P+I S E                 L LTE   G+D+  + +Q     D        K+
Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++D F++LA  +G+    L   L+E G+ +GL    + N +G RSN   E+ F N
Sbjct: 155 ITLGQIADLFLVLANCQGQ----LTAVLVEKGT-SGLIITPMSNFLGLRSNMLAEIFFDN 209

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
                  LLG + +    V    I   LD    + +   V L +A     + Y ++R   
Sbjct: 210 CRIPKTNLLGSIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ I ++ + + AA  L F       E + +   A  A  +  I KY   
Sbjct: 266 DRRLDEHQLIQKMITEMVVQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           KM   V   A++  G +G+ E   + R+YR++    I+ G+
Sbjct: 320 KMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360


>gi|301059557|ref|ZP_07200469.1| putative gas vesicle protein GvpC repeat protein [delta
           proteobacterium NaphS2]
 gi|300446322|gb|EFK10175.1| putative gas vesicle protein GvpC repeat protein [delta
           proteobacterium NaphS2]
          Length = 385

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 41/272 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-- 253
           +  GLTE   G+D++ + ++   + DG  Y ++G K F+S + ++D   + A+ +  V  
Sbjct: 120 VAFGLTEPNAGSDVSGLKTRA--VRDGEDYIINGTKIFISHADIADVICIAARTDTTVPG 177

Query: 254 ----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--- 306
               G F+V    E GS +G    + ++K+G R ++TVE+        +L D+ V     
Sbjct: 178 PRGTGIFIV----EKGS-SGFTIGKHEDKMGVRGSSTVEI--------ILEDVRVPAKNL 224

Query: 307 --GPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
             G      IL+  LD   + V+   V +A+     AI Y + R   G  L     ++  
Sbjct: 225 LGGESLGFPILMKTLDLTRIPVASQAVGIAQGALDYAISYTKERTQFGKPLFSFQGLQWM 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +AD+A  + AA  L+++ A+ F++         +EA     MA   K +  + A  V  +
Sbjct: 285 MADMATQVEAARQLTYKAASVFEKFPKNLDRLPKEAVRQSAMA---KLFAGETAMKVTTD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ +GG G+++E  + R  R++    I  G+
Sbjct: 342 AVQLLGGYGFVKEYPVERMMRDAKITQIYEGT 373


>gi|116330037|ref|YP_799755.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123726|gb|ABJ74997.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 586

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 56/361 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P+I + +Y             +  + LTE   G+D+  + ++  + ++G++ ++G 
Sbjct: 170 EKWLPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDTNGVWRVNGA 216

Query: 232 KWFLSSPMS-----DAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           K F++            + LA+      G   +   L  G  N +    +++K+G   + 
Sbjct: 217 KRFITHACGYIGAPSVILTLARTGSLESGARGLSFFLVKG--NDVHIAGVEHKMGLHCSP 274

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T E+ F N+ G L+G     TG       +  +++A ++++   + +A A +Y  +++ S
Sbjct: 275 TCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAYYEGKKYAS 330

Query: 346 GGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------EAKSRSEE- 389
             I   +P+ +    R I D +  +I A   L      + D          +A+ +SE  
Sbjct: 331 ERIQFGKPIEQIPAVRKILDRMEREILATRVLIVETGKAIDLYHWPKERLIKAEGKSERD 390

Query: 390 ----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                        A +  P++KY+  +   A+ ++A++  GGSGY E+  +AR YR+S  
Sbjct: 391 VSQDETIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVARIYRDSRI 450

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLC 494
            +I  G+    ++  +  +  G +   QL    E++L         KKV + L  S+ L 
Sbjct: 451 TTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYAEEELSKFSPSEDLKKVWSDLNTSVGLY 510

Query: 495 K 495
           K
Sbjct: 511 K 511


>gi|316934920|ref|YP_004109902.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602634|gb|ADU45169.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + +  ++  D  Y ++G K F++S  +   I+L  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R+++K+G  S+ T +L F++    +  DL +     E +
Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAA  +    A+  +       EA+ A+++A  T       A AV + A++ +GG GY++
Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLLASET-------AEAVCSSAIQTLGGYGYLK 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +  + R YR+     I  G+ +
Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365


>gi|54024525|ref|YP_118767.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54016033|dbj|BAD57403.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 381

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 21/266 (7%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--- 250
            + + +G+TE   G+D+  I ++  +  D  Y ++G K F+++  + D  I+ A+ +   
Sbjct: 119 EMVLSIGMTEPGTGSDLQNIKTRAVREGDE-YVITGSKIFITNGWLCDGIIIAAKTDPTK 177

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           G  G  L+   + D +P G    R+ +KIG +   T EL F         LLG+     G
Sbjct: 178 GAAGVSLIFAEVGDDTP-GFTRGRILSKIGGKGQDTAELFFDGLRVPASNLLGEAE-GQG 235

Query: 308 PVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M++L    L +A+++V  M  ++   + Y + R   G     +P+   A+ +   +
Sbjct: 236 FYQMMQLLAQERLVTAVIAVPMMEKAVQLTVEYTKGREAFG-----KPLY--AMQNTKFE 288

Query: 366 IAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +A    ++ R+A +F D+A  +          A +TKYW       V+   ++  GG GY
Sbjct: 289 LAECATIA-RVARTFLDDAIVKHLRGELDIPTAAMTKYWITDQLGGVVDRCLQLFGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I++ Y  +    IL GS   M
Sbjct: 348 MTEYPISQLYTGARVLRILAGSNEVM 373


>gi|304392107|ref|ZP_07374049.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303296336|gb|EFL90694.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 390

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 43/315 (13%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+ +  T    + W PK+ S +             V     LTE   G+D AA+ ++ 
Sbjct: 102 AWMIDVNGTEEQRQHWLPKMTSMD-------------VVASYCLTEPGSGSDAAALKTK- 147

Query: 219 QKISDGI-YCLSGHKWFLSSPMSDA-FIMLAQVE----GRVGCFLVPRLLEDGSPNGLCY 272
             + DG  Y LSG K F+S   ++  + ++A+      G V CFL+    EDG+P GL +
Sbjct: 148 -AVKDGNEYVLSGTKQFISGAGTNGLYAVMARTSDDGAGGVSCFLI----EDGTP-GLSF 201

Query: 273 QRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              + K+G     T ++         +N  G       ++   ++  ++ I       SV
Sbjct: 202 GPQEKKMGWHVQPTAQVILDDCRVPPANMLGGEGNGFRIAMSGLDGGRLNI----GACSV 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G +++L +A  YA  R   G  +      +  +AD+A ++ AA  L +  A   D   +
Sbjct: 258 GGAQLALEKAQAYATERSAFGKPIGQFQATQFKLADMATELEAARVLLYSAAAKLD---A 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++ +A  A  MA   K +       V  +A++  GG GY+ +  + +  R+   + IL G
Sbjct: 315 KAPDATKACAMA---KRFATDTGSKVANDALQIFGGYGYLADYGVEKIVRDLRVHQILEG 371

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   +EK
Sbjct: 372 TNEIMRVIISRAMEK 386


>gi|302867580|ref|YP_003836217.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570439|gb|ADL46641.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 380

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E +GG+D AA+T++  +  D  Y ++G K W   + ++D + +  +  G  G   +  
Sbjct: 126 LSEPQGGSDAAALTTRAVRDGDA-YVVTGTKAWITHARVADFYNIFCRTGG-PGPKGISC 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
           LL D S  G+  Q  +  +G  ++   ++ F +     +    +  G      I +  LD
Sbjct: 184 LLADRSTAGIHPQAAERTMGLHASPIAQIAFDDA---RVPAERLIGGEGAGFTIAMSALD 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           S  + ++   V LA+     A+ YAR R   G  +ID   +   +AD A  I+AA AL+ 
Sbjct: 241 SGRLGIAACAVGLAQGALDYAVGYARERRQFGRAIIDFQGLGFNLADAATQISAARALTL 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +  S EAA A++ A         +A  V  +A++ +GG+GY+ +  + R+ 
Sbjct: 301 AAARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYM 353

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           RE+    I+ G+     L +   L KG
Sbjct: 354 REAKVLQIVEGTNQIQRLVISRALAKG 380


>gi|262279538|ref|ZP_06057323.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259889|gb|EEY78622.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 378

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + ++G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDQ-WVINGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP      +  G    R+++K+G  ++ T  +   N     L +L    G  E  KI 
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLENCR-IPLENLVGQEG--EGYKIA 233

Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       +  A  SV   R +   A+ YA +R   G  L+    +   +AD+A  I AA
Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANQRKAFGVELVQHQAVSFRLADMATQIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   DE     +E++ A++ A         MA  V ++A++  GG GY+ +  
Sbjct: 294 HQLVLHAATLKDEGLPCLKESSMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDFP 346

Query: 430 IARHYRESPANSILLGSGN 448
           + R YR+   + I  G+ +
Sbjct: 347 VERIYRDVRVSQIYEGASD 365


>gi|71065524|ref|YP_264251.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038509|gb|AAZ18817.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 594

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 40/291 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252
           LTE   GTD+  I ++     DG Y +SG K F++     ++D  I  +LA+     EG 
Sbjct: 166 LTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGS 225

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L  EDGS    N L    +++K+G +++AT  + F +  G+++G  N  
Sbjct: 226 KGISLFVVPKFLVNEDGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------------HVSGGILI 350
              +  M I++  +   M + G+    ++   A  YA  R                  +I
Sbjct: 286 ---LSSMFIMMNYERVTMGLQGLGGSELAYQNAALYANDRGQGRSDTQVQSPEKPADAII 342

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
               ++R + +   +  A+   +  +A + D  K  ++        A   ++ P+ K + 
Sbjct: 343 HHADVRRMLLNAKANTEASRCFAMYVAKNLDAEKFSTDPEAAQAATARVALLTPVAKAFL 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              A     +  +  GG GYI E  + +  R++    I  G+     LD+L
Sbjct: 403 TDKALEATVDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLL 453


>gi|288959447|ref|YP_003449788.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288911755|dbj|BAI73244.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 611

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 49/298 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + +TE + G+D+AA  S+     D  + ++G K F++     +++  I L         +
Sbjct: 167 MNITEPQAGSDLAATRSRAVPNGD-HHLVTGQKIFITYGDHDLTENIIHLVLARLPDAPS 225

Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
            V+G +  F+VP+ L +     G+ N +    L++K+G   + T  L F +     GFL+
Sbjct: 226 GVKG-ISLFVVPKFLVNADGGLGARNQVKCVSLEHKLGIHGSPTAVLSFGDEGGATGFLV 284

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL----- 349
           G+ N     +E M     ++ A ++V+   +S+AE     A+ YAR R V G  L     
Sbjct: 285 GEPNRG---LEYM--FTMMNHARLAVAMQGLSIAERAYQQALAYARDR-VQGKPLGWTEG 338

Query: 350 -----IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398
                ++ P ++R +  +   I A   L +  A + D A   ++E A  R      ++ P
Sbjct: 339 RPKGIVNHPDVRRLLMGMKARIEAMRGLLYTAAAAVDVAHHHADEDARGRAALLVDLLTP 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           I K WC +   A+ ++ ++  GG G+IEE   A+H R++   +I  G+      D++N
Sbjct: 399 IAKGWCTETGQALASDGVQVHGGMGFIEETGAAQHLRDARITTIYEGTTAIQANDLIN 456


>gi|315499057|ref|YP_004087861.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417069|gb|ADU13710.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 389

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ +  ++ +DG Y L+G K W  +SP++D F++ A+++G +  F++
Sbjct: 134 FGLTEPDAGSDPASMRTTARRAADG-YVLNGTKMWISNSPIADVFVVWAKLDGIIRGFVL 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
                D   +GL   ++  K+  R++ T E+   N       LL ++    GP       
Sbjct: 193 -----DKGMSGLSAPKIHGKLSLRASITGEIVMDNVLVGEDALLPNVEGLKGPFG----- 242

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +I    
Sbjct: 243 -CLNRARYGISWGVMGAAEDCWHRARQYGLDRQQFGRPLAQTQLFQKKLADMQTEITLGL 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FD  + + E       M  + K   C  A  +   A +  GG+G  EE  +
Sbjct: 302 QASLRVGQLFDAGQVQPE-------MISLIKRNNCGKALDIARMARDMHGGNGIHEEYHV 354

Query: 431 ARH 433
            RH
Sbjct: 355 MRH 357


>gi|229069862|ref|ZP_04203144.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228713265|gb|EEL65158.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST 471
           L V  +L K     EQL  T
Sbjct: 403 LTVAKMLMKQ---IEQLEDT 419


>gi|229173035|ref|ZP_04300586.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228610368|gb|EEK67639.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAQNVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|242814012|ref|XP_002486284.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218714623|gb|EED14046.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 426

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  ++ A++E  G++ 
Sbjct: 162 FGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGAKTWITNSPISDVLLVWAKLESTGKIK 221

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            FL+ R      P  L    +KNK   R++ T  ++  N       +L  +   +GP   
Sbjct: 222 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPEENMLPTVEGLSGP--- 276

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G+  +L +A+  AR     R+   G  L    ++++ +AD A D
Sbjct: 277 ---FTCLNSARLGIAFGVTGALEDALSRAREYSLDRKQFKGNPLAKYQLIQKKLADAATD 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   D  KS  E       M  + K   C  A A      E  GG+   
Sbjct: 334 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 386

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 387 DEYHIGRH 394


>gi|296269561|ref|YP_003652193.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092348|gb|ADG88300.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 389

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 44/269 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L +TE   G+D AA+ ++  +  D  Y L+G K W  ++P ++ FI+ A ++       V
Sbjct: 131 LAVTEPGVGSDAAALQTRAVRQGDH-YVLNGQKTWISNAPYAEYFIIFATIDPSLRSKGV 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
             F+VPR     +  GL   +   K+G R     E+         L D+ V   PVE+  
Sbjct: 190 TAFVVPR-----NTPGLSVGKPMRKMGQRGIVNAEV--------FLDDVRV---PVENRL 233

Query: 312 -------MKILIYLDSAIM----SVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAI 359
                    ++   D++ +    S +G+  +  +A   YA+ R   G  +I+   +   +
Sbjct: 234 GDEGQGFYGLMRTFDASRILIGASATGLARAALDAALQYAKERRQFGTAIINHQAVAFRL 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  +  A  L+ R A  +D+  S +EEA+ A+++A     W       V A A++  
Sbjct: 294 ADMAAKVDTAHLLTVRAARLYDQGLSVTEEASMAKLVASENASW-------VTAAALQTH 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448
           GG GY  E  + R  R++    I  G+ +
Sbjct: 347 GGWGYSREFPLERWMRDAKLEEIEEGTSD 375


>gi|70729530|ref|YP_259268.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343829|gb|AAY91435.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 628

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +   A  + LTE   GTD+  I ++ +  ++G Y +SG K F++    D       +
Sbjct: 192 PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQANGSYRISGSKIFITGGEQDLTENIIHL 251

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP++  D     G+ N +    +++K+G +++AT  L F  
Sbjct: 252 VLAKLPDAPAGPKGISLFLVPKIHVDANGNLGAANAVSCGSIEHKMGIKASATCVLNFDG 311

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGIL 349
             G+L+G+ N     +  M     L   I  +     S   A  YAR R  S    G + 
Sbjct: 312 ASGWLIGEANKGLAAMFTMMNYERLSIGIQGIGCAENSYQNARTYARERIQSRSPAGPVA 371

Query: 350 IDQ--------PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            D+        P ++R      A+ +     A+       LA   D+   R    A   +
Sbjct: 372 KDKIADPIIVHPDVRRMLLTMKAMTEGGRAFASYVGQQLDLAKFADQPHERHNAEALVAL 431

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 432 LTPVAKAFFTDTGLDSCVLGQQIFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLL 491

Query: 456 N 456
            
Sbjct: 492 G 492


>gi|71905738|ref|YP_283325.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71845359|gb|AAZ44855.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 378

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255
           LTE   G+D AAIT++  +  D  + L+G K F+++     M+  F +  +  G+ G  C
Sbjct: 123 LTEPHTGSDAAAITTRADRDGDH-FVLNGVKQFITTGKYAHMAIVFAVTDKAAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FL+P         G    R ++K+G  ++ TV++ F +       LLG       ++   
Sbjct: 182 FLIPT-----DTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  S+   R +   A+ YA+ R   G  +I+   +   +AD+   + A
Sbjct: 237 LEAGRIGI----ASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +R A   D  K   +EA+ A++ A        + A  + ++A++  GG GY  + 
Sbjct: 293 ARLMVWRAAMLKDAGKPCLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRICQIYEGAND 365


>gi|169767448|ref|XP_001818195.1| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus
           oryzae RIB40]
 gi|238484315|ref|XP_002373396.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|83766050|dbj|BAE56193.1| unnamed protein product [Aspergillus oryzae]
 gi|220701446|gb|EED57784.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 437

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K+SDG Y L+G K ++++ M S  FI+ A ++   G   +  
Sbjct: 178 LSEPASGSDAFALQTKAEKLSDG-YKLNGSKMWITNAMESGVFIVFANLDPSQGYKGITA 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + +    G    + + K+G R+++T  L F +    ++   N+     +  K  I  L+
Sbjct: 237 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKSNLLGEEGQGYKYAISVLN 293

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373
              + ++     LA      A  Y        G LI     M+  +A    +IAAA AL 
Sbjct: 294 EGRIGIAAQMTGLALGAWENAARYVWNDRRQFGQLIGTFQGMQHQLAQAYTEIAAARALV 353

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    + 
Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEKM 406

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +  LL+K
Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|45361383|ref|NP_989269.1| short-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|39795787|gb|AAH64210.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus
           (Silurana) tropicalis]
 gi|89271279|emb|CAJ83244.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus
           (Silurana) tropicalis]
          Length = 409

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A ++   K+    + L+G K W  ++  + A ++LA  +  +    +
Sbjct: 149 FALSEPGNGSDAGAASTTA-KLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGI 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    GL   + ++K+G R+++T  L F +     +   N+   P    KI +  
Sbjct: 208 SAFLVEMPTPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRQNLLGQPGMGFKIAMQT 264

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   + + +A     + YA +R   G  +     ++  +AD+AL + +A  L
Sbjct: 265 LDAGRIGIASQALGIGQAALDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLL 324

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D  K  ++EAA A++ A        + A  +  +A++ +GG GY+ +    R
Sbjct: 325 TWRAAMMKDNKKPFTKEAAMAKLAA-------SEAATQISHQAIQILGGMGYVSDMPAER 377

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
           HYR++    I  G+     L + N L K
Sbjct: 378 HYRDARITEIYEGTSEIQRLVIANQLLK 405


>gi|169797690|ref|YP_001715483.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184156452|ref|YP_001844791.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213155516|ref|YP_002317561.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215485044|ref|YP_002327285.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|239503089|ref|ZP_04662399.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|301347774|ref|ZP_07228515.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511935|ref|ZP_07237172.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301597247|ref|ZP_07242255.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332853580|ref|ZP_08434832.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332869303|ref|ZP_08438701.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|169150617|emb|CAM88526.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|183208046|gb|ACC55444.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213054676|gb|ACJ39578.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987328|gb|ACJ57627.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|322506318|gb|ADX01772.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323516189|gb|ADX90570.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332728544|gb|EGJ59917.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332732811|gb|EGJ64026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|17508101|ref|NP_491859.1| Acyl CoA DeHydrogenase family member (acdh-3) [Caenorhabditis
           elegans]
 gi|13384503|gb|AAK21433.1| Hypothetical protein K06A5.6 [Caenorhabditis elegans]
          Length = 419

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 50/317 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A ++  + T    + + PKI +                AIG   L+E   G+D  A+ + 
Sbjct: 130 APLIIQLGTEEQKQKYLPKIVTE---------------AIGSFALSETGSGSDAFALKTT 174

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
            +K  D  + +SG K W  ++  +  F++ A  +   G     CFLV R  E     G+ 
Sbjct: 175 AKKDGDD-FVISGSKMWITNAGHAQFFLVFANADSAKGYKGITCFLVDRNQE-----GVS 228

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
             + ++K+G R+++T  + F N       +LG+        +  K  I  L++  + +  
Sbjct: 229 VGKKEDKLGIRASSTCSVHFDNVRVHKSSILGEYG------KGYKYAIECLNAGRIGIGA 282

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + LA+      I Y ++R   G  LID   M+  I    ++I AA  L +  A     
Sbjct: 283 QMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARMKQN 342

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 EAA A++ A        ++A    ++ +E +GG G+ +E  + + YR+S   +I
Sbjct: 343 GLPFVREAAMAKLFA-------SQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTI 395

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+ N  +  +  L++
Sbjct: 396 YEGTSNIQLNTIAKLVD 412


>gi|169780668|ref|XP_001824798.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus oryzae RIB40]
 gi|46430489|dbj|BAD16690.1| isovaleryl-coenzyme A dehydrogenase [Aspergillus oryzae]
 gi|83773538|dbj|BAE63665.1| unnamed protein product [Aspergillus oryzae]
          Length = 430

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 27/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  +++ DG Y L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLLSGDKIGALAMSEHSAGSDVVSMKTTAKEV-DGGYVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E + G   +   + + + +G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPQKGSKGITAFVVEKTFDGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG++N        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 262 PKENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   + A+ A ++  A   D + S SE +   +  A    Y   + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASLSEVSIRTQDCAGAILY-AAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413


>gi|228921051|ref|ZP_04084386.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838597|gb|EEM83903.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 26/284 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPADNVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             + R YR++  + I  G+     L V  +L K     EQL  T
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDT 419


>gi|254293966|ref|YP_003059989.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254042497|gb|ACT59292.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 382

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 43/293 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T +  K + PK+ S E+  +             L ++E   G+D+  + ++ +K+ DG Y
Sbjct: 106 TDQQKKKYLPKLISGEHVGS-------------LAMSEAGAGSDVLGMVTKAEKV-DGGY 151

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            L+G K W  ++P +D  ++ A+ +       V  FL+ +  E     G    +  +K+G
Sbjct: 152 LLNGTKFWITNAPEADTLVVYARTDPNNKNQGVTTFLIEKEFE-----GFSVSKKLDKLG 206

Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            R + T EL F       SN  G + G   V    ++  +++  L +  + +  ++  L 
Sbjct: 207 MRGSDTAELVFEDCFVPESNIMGEVHGGAKVLMSGLDYERVV--LSAGPLGI--IQACLD 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             I Y + R   G  +    +++  IAD+ + + +A A ++ +A + D  ++   +AA A
Sbjct: 263 VCIPYVKDRKQFGKPIGSFQLVQAKIADMYVALNSARAYTYAVARACDAGQTTRFDAAGA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++A        + A     EA++ +GG+GY++E  + R  R++    I  G+
Sbjct: 323 ILLA-------SENAVKSSLEAIQTLGGAGYLKEWPVERFLRDAKLYDIGAGT 368


>gi|319760919|ref|YP_004124856.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822823|ref|YP_004386126.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115480|gb|ADU97968.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308195|gb|AEB82610.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 385

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 43/284 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     W PK+ + E             V     LTE   G+D A++ +      D  Y
Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAILQGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K F++ +P +  F ++A+        G V  F+V     D    G+ + +   K+
Sbjct: 148 VVNGTKRFITNAPHAGMFTLMARTNPQDKGAGGVSSFIV-----DAKSPGISFGKYDKKM 202

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G R   T ++ F N       L+G L    G    MK+L    I++  A ++V   +  L
Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LKEGQGFKTAMKVLEKGRIHI--AAVAVGVAKRIL 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA  R   G  + +  +++  +AD   ++ AA  ++   A   D+  + S EA+ 
Sbjct: 260 RDALAYALERKQFGQPICEFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ A        +M   V   A++ +GG+GY+ E  I R YR+
Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356


>gi|294012375|ref|YP_003545835.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675705|dbj|BAI97223.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 381

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 47/294 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++  + +K  D  Y
Sbjct: 106 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEKRGD-RY 151

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++P +D  ++ A+  EG  G  +   L+E G       Q++ +K+G R +
Sbjct: 152 ILNGTKFWITNAPYADTLVVYAKTGEGARG--ITAFLIEKGFKGFSIGQKI-DKVGMRGS 208

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-- 335
            T EL F        N  G L G + V         ++  LD     +SG+++ + +A  
Sbjct: 209 PTAELVFDDCEVPEDNVMGPLNGGVGV---------LMSGLDYERAVLSGIQLGIMQACL 259

Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D  K+   +AA 
Sbjct: 260 DVVLPYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACDRGKTTRFDAAG 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A ++A        + A  V  EA++ +GG+GY ++  + R+ R++    I  G+
Sbjct: 320 AILLA-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLDIGAGT 366


>gi|255318694|ref|ZP_05359921.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378125|ref|ZP_06071282.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304192|gb|EET83382.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299410|gb|EEY87322.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  + ++G K F++S  +   I++  +
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKNGDD-WIINGAKQFITSGNNAGVIIVFAI 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   F+VPR        G    R + K+G  ++ T ++  +N       +LG
Sbjct: 170 TDPEAGKKGISAFIVPR-----ETQGYEVVRTEEKLGLHASDTCQIALTNVRVPNTLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 QQGEGLKIALSNLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGQPIFEHQAIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  K    EA+ A       K +  +MA  V + A+
Sbjct: 281 FRLASMATEIEAARQLVHHAARLKEAGKPCLNEASMA-------KLFSSEMAERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+++  I R YR++    I  G+ +
Sbjct: 334 QIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|229007037|ref|ZP_04164664.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock1-4]
 gi|228754186|gb|EEM03604.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock1-4]
          Length = 381

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 59/318 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W PK  S E                 + +TE   G+D+A+I +  +K  D  Y
Sbjct: 103 TEEQKKRWVPKCVSGE-------------CITAIAMTEPGAGSDLASIRTTARKEGD-YY 148

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++ + +D  I++ + +  +     G  L+  +LE G       ++LK KIG
Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             S  T EL F         D+ V    +  E+ K   YL   +     + V++A     
Sbjct: 206 LHSQDTAELIFE--------DVKVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKTAA 256

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSR 386
               H++   + ++    ++I+D          + FRLA  + E            A   
Sbjct: 257 EVMLHITKNYVQERKAFGKSISDF-------QTVQFRLAEMYTEIEIGRTFVDDCIANHM 309

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E    ++   + K+W   +A  V AE ++  GG GY+EE  IAR YR+ P ++I  G+
Sbjct: 310 NGENIVTKV--SMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAIYAGA 367

Query: 447 GNAMVLDVLNLLEKGTNL 464
              M     N++ KG  L
Sbjct: 368 NEIM----KNIIAKGMGL 381


>gi|229060001|ref|ZP_04197373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229167168|ref|ZP_04294909.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228616206|gb|EEK73290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228719318|gb|EEL70924.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENILG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|254516151|ref|ZP_05128211.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR5-3]
 gi|219675873|gb|EED32239.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR5-3]
          Length = 669

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 148/341 (43%), Gaps = 48/341 (14%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           LM P ++   +  L    +P   + + PK+ S  +  T             + LTE   G
Sbjct: 197 LMYPGLSHGCIKTLEAHGSPEQKQQYLPKLVSGNWTGT-------------MCLTESHCG 243

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFIMLAQV----EGRVGC--FL 257
           +D+  + ++ +  +DG Y ++G K F+S+    MSD    I++A++    EG  G   F+
Sbjct: 244 SDLGLLRTKAEPQADGSYAITGTKIFISAGEHDMSDNIVHIVIARMPDAPEGTKGISLFV 303

Query: 258 VPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+  + EDGS    NG+    ++ K+G +++AT  + F    G+L+G+ N     +   
Sbjct: 304 VPKFNVNEDGSIGERNGVHCASIEKKMGIKASATCVMNFDGAKGYLIGEPNRGLNMMFTF 363

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIA 360
                + +AI  ++   ++   ++ YAR R     +            +I  P ++R + 
Sbjct: 364 MNTARIGTAIQGLAHAELAYQGSLEYARERLAMRSLTGPKNPDGPADPIIVHPDVRRMLL 423

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEA 415
                   + A+ + LA   D  +   EE+A        ++ PI K +  +         
Sbjct: 424 TQKSIAEGSRAMLYYLAQLGDIVERGDEESAKKADDLMALLTPIAKAFVTEAGLEAANHG 483

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + +  R++   ++  G+     LD++ 
Sbjct: 484 IQIYGGHGFIREWGMEQIARDARIATLYEGTTGIQALDLIG 524


>gi|153000023|ref|YP_001365704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|160874644|ref|YP_001553960.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|304409611|ref|ZP_07391231.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307303969|ref|ZP_07583722.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|151364641|gb|ABS07641.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
 gi|160860166|gb|ABX48700.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|304352129|gb|EFM16527.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306912867|gb|EFN43290.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|315266886|gb|ADT93739.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 385

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++  Q + + DG  Y +SG K F+S   +   +++    G+ G   +  
Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           +       G+ Y + ++K+G  +  T ++ F N       LLG+     G    MK L  
Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  R
Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +F    S  E  AY      + K +   +   V   A++  GG GYI E  + RH+R
Sbjct: 299 LA-AFKLDSSDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|6942167|gb|AAF32336.1|AF218939_4 acyl-CoA dehydrogenase [Bacillus subtilis]
          Length = 370

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 29/268 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCF 256
            GLTE   G+D     +Q + + DG  Y ++G K ++++      +++  V G+   G  
Sbjct: 113 FGLTEPNAGSDAGG--TQTKAVIDGDEYVINGEKCWITNASYARTVIVTAVTGKNESGNN 170

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           ++  L+      GL      +K+G R + T E+   +      +LLGD      P +  K
Sbjct: 171 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVHASYLLGD------PSKGFK 224

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ LD   +S++ + V +A+A     + YA+ R   G  +     ++  +AD+A++I 
Sbjct: 225 QFLHTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 284

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  +  + A   D  +  ++EAAYA++ A        +MA     +A++   GSGY+ E
Sbjct: 285 LARQMVLKAAWLKDHKRPFTKEAAYAKLFA-------SEMATRACNQAIQIHAGSGYMRE 337

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
            ++ R  R+  A  + +G G + +  ++
Sbjct: 338 YAVERMLRD--AKLMEIGEGTSEIQRIV 363


>gi|282866161|ref|ZP_06275208.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282558945|gb|EFB64500.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 390

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVG--CF 256
           L+E   G+D A++ ++  +  D  + L+G K W     ++D   +LA+  VEG  G   F
Sbjct: 133 LSEPASGSDAASLRTKAVRDGDD-WVLTGTKAWITHGGIADFCTVLARTGVEGPRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G   GL     + K+G + + T +L F    G  +GD        +   I L
Sbjct: 192 LVP-----GDAEGLGAAPPEKKMGMKGSPTAQLHFD---GVRIGDDRRIGDEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDSGRLGIAACAVGVAQAALDEAVGYATGRRQFGRPVADFQGLRFMLADMATRIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     S +AA A       K +C  +A  V  +A++ +GG GY  +  +
Sbjct: 304 ALYLEAARLRDAGLPFSRQAAMA-------KLFCTDVAMQVTTDAVQVLGGYGYTLDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    I+ G+
Sbjct: 357 ERLMREAKVLQIVEGT 372


>gi|288959960|ref|YP_003450300.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288912268|dbj|BAI73756.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 377

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           PM +  +     LTE + G+D +AI ++ ++  D  + L G K F++S   +D  I+ A 
Sbjct: 111 PMARGEMLGAFCLTEPQAGSDASAIRTRARRDGDH-WVLDGTKQFITSGSQADVAIVFAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL- 302
            +   G      F+VP         G    R + K+G   + T ++ F +    + GDL 
Sbjct: 170 TDPAAGKKGLSAFIVPT-----DTPGYQVARTEEKLGQHCSDTCQILFEDCR--VPGDLM 222

Query: 303 --------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                    V+   +E  +I I    A  +V   R +L  A+ YA+ R   G  +I    
Sbjct: 223 LGAEGAGYKVALANLEGGRIGI----ASQAVGMARAALDHAVRYAQERQSMGVPIIQHQA 278

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  + AA  L    A+  D      +EAA A++ A        +MA  V ++
Sbjct: 279 VAFRLADMATKVEAARQLVLHAASLRDAGVPCMKEAAMAKLFAS-------EMAEKVCSD 331

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++  GG GY+ +  + R YR+     I  G+ +
Sbjct: 332 AIQIHGGYGYLNDFPVERIYRDVRVCQIYEGTSD 365


>gi|110834633|ref|YP_693492.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110647744|emb|CAL17220.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 380

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 19/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A +  Q + + DG  Y ++G K F++S +   +  +A   G  G   +
Sbjct: 125 LAITEPNGGSDVANL--QTRAVRDGDHYVVNGAKTFITSGVRADYYTVAVRTGDKGYGGI 182

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             LL E G+P     ++LK K+G  ++ T EL F +       L+G  N     +     
Sbjct: 183 SLLLIEKGTPGFTVGRKLK-KMGWWASDTAELFFEDCRVPAENLIGPENGGFYCIMSNFQ 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L  A+ + S  +++L EA+ Y + R   G  L    V +  +A++A D+ A+T  ++
Sbjct: 242 MERLVLAVTANSTAQLALDEALRYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTY 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A      ++   + + A+ +A        + A  V  +A++  GGSGY+    + R +
Sbjct: 302 RVAAKIAAGENCVLDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLF 354

Query: 435 RESPANSIL-LGSGNAMVLD 453
           R+   N IL +G G   +++
Sbjct: 355 RD---NRILSIGGGTHEIMN 371


>gi|84623614|ref|YP_450986.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84367554|dbj|BAE68712.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++   +L     V     E  +  +  
Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 250

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + ++   EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 311 TLRAAWLKGQRQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 364 YFRDAKITEIYEGT 377


>gi|328877386|pdb|3R7K|A Chain A, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877387|pdb|3R7K|B Chain B, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877388|pdb|3R7K|C Chain C, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877389|pdb|3R7K|D Chain D, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
          Length = 403

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +  R   PT    M  +     LG+TE   G+D+A
Sbjct: 106 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 160

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G   
Sbjct: 161 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 219

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
            R  +K+G R + T EL F +       L+G  N  +G ++ M+      L  A+ + + 
Sbjct: 220 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 277

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A  +AR R   G  L  + +++  +A++A  +  A   +  +   +   +   
Sbjct: 278 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 337

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            E +    MA  T  + C     V+ EA++  GG GY+ E  I RHYR+
Sbjct: 338 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 379


>gi|320168731|gb|EFW45630.1| isovaleryl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 427

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ + R G   V
Sbjct: 165 LAMSEPGSGSDVVSMQLRAEKKGD-KYVLNGNKFWITNGPDADVLVVYAKTDVRGGSKGV 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G       +K G R + T EL F +     +   NV  G  + + +L+  
Sbjct: 224 TAFLVEKGFKGFTTGPKLDKFGMRGSNTCELIFEDC---EIPAENVMGGVGKGVYVLMSG 280

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++G     M+ +L  AI YA  R   G  + +  +M+  +AD+   +A++ + 
Sbjct: 281 LDYERLVLAGGSTGLMQAALDIAIPYAHTRKQFGQKIGEFQLMQGKLADMYTKLASSRSF 340

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A + D  +   ++ A   ++       C + A  V  EA++ +GG+GYI E    R
Sbjct: 341 LYAAARAADRGEIDGKDCAAVILL-------CAENATQVCLEALQTLGGNGYINEYDTGR 393

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 394 LVRDAKLYEIGAGT 407


>gi|320158804|ref|YP_004191182.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
 gi|319934116|gb|ADV88979.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
          Length = 384

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 45/365 (12%)

Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164
           + ++WD + F PV V K+A ++    LY         M++L+A  +    S+   S  A 
Sbjct: 27  NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 86

Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           MT   +H   +W    F ++E        +   ++     LTE   G+D A++ +   + 
Sbjct: 87  MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGTLLGSYCLTEPNSGSDAASLKTTATRQ 143

Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLK 276
            D  Y ++G K F+S +  +   +++A+  G     V  F+VP         G+ Y R +
Sbjct: 144 GDE-YRINGAKAFISGAGETQVLVVMARTGGEGAKGVSAFVVP-----ADAQGVSYGRKE 197

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            K+G  S  T  + F N        LG+       +   ++  +I I    A  SV   +
Sbjct: 198 PKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  Y + R   G  L +   ++  +AD+A ++ AA  L    A+  D  K   + 
Sbjct: 254 QALNLATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFAASKLD--KGDPDA 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            AY      + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G+   
Sbjct: 312 TAYC----AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEI 367

Query: 450 MVLDV 454
           M L V
Sbjct: 368 MRLIV 372


>gi|330984630|gb|EGH82733.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D       PV             +++A  + A D+    +  F    + +   +R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|289670333|ref|ZP_06491408.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 393

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 191 FVVPADAPGITYGRKEEKMGWNSQPTRGVTFENV---RIPAENLLGKECEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|149469715|ref|XP_001519538.1| PREDICTED: similar to acyl-CoA dehydrogenase, short-chain-specific
           [Ornithorhynchus anatinus]
          Length = 350

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +  
Sbjct: 92  LSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWDASATVVFATTDKALKHKGITA 150

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           FLVP         GL   + ++K+G R+++T  L F +        LG+      P +  
Sbjct: 151 FLVPM-----PTPGLSLGKKEDKLGIRASSTANLIFEDCRIPRHHALGE------PGQGF 199

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+A     + YA +R   G  L     ++  +AD+AL +
Sbjct: 200 KIAMQTLDMGRIGIASQALGIAQAALDCAVDYAEKRMAFGAPLTKLQGIQFKLADMALAL 259

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K   +EAA A++ A        + A ++  +A++ +GG GY+ 
Sbjct: 260 ESARLLTWRAAMLKDNGKPYGKEAAMAKLAA-------SEAATSIAHQAIQVLGGMGYVT 312

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 313 EMPAERHYRDARITEIYEGT 332


>gi|152985952|ref|YP_001351247.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961110|gb|ABR83135.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 596

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 59/327 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEPRADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLE--DGS---PNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ +   DGS    N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLPDAPAGVKG-ISLFLVPKFIARPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +AA 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
           + +  R+S    I  G+     LD+++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLVH 450


>gi|145225179|ref|YP_001135857.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217665|gb|ABP47069.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 381

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 16/268 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P   T   +G + +TE   G+D+ ++T++  ++ D  Y ++G K F+++   +D  I++A
Sbjct: 115 PRLATGEMVGAIAMTEPGTGSDLQSVTTKASRVGDE-YVVNGSKTFITNGAQADLIIVVA 173

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +   G   +  +L +G   G    R+ +K+G R   T EL F +       LLG    
Sbjct: 174 KTDPSAGANGISLVLVEGDRPGFRRGRVLDKVGQRGQDTSELYFEDVHIPVENLLGTTE- 232

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G ++ M+ L    L  A+ +V+ +  +L   + Y + RH  G  +      K  +A++
Sbjct: 233 GQGFIQLMQQLPQERLILALGAVTVLETALEFTVEYTKDRHAFGKPVFAFQNTKFKLAEV 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D   +           D+  +R            + K+W  + A   + + ++  GG 
Sbjct: 293 ATDAHISRVF-------IDDCVARHLRGELDIPTVAMAKWWTTERAMVALDDCLQLHGGY 345

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  I R + ++    I  G+   M
Sbjct: 346 GYMTEYPIGRMWADARVQKIYGGTNEIM 373


>gi|307295790|ref|ZP_07575623.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878446|gb|EFN09667.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 592

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 57/338 (16%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  I ++     DG Y ++G K F+
Sbjct: 150 PKLISGEWSGT-------------MCLTESHSGTDLGLIKTRAVPAKDGSYAITGGKIFI 196

Query: 236 SS---PMSDAFIMLA---------QVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNK 278
           S+    M D  + L           V G +  FLVP+ L  E+G+P   NG+    +++K
Sbjct: 197 SAGEHEMVDNIVHLVLAKLPDAPPGVRG-ISLFLVPKYLPDENGAPGARNGVSAGSIEHK 255

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-------RVS 331
           +G +      + F +  G+L+G+ +     +  M  ++ ++  ++S  G        + S
Sbjct: 256 MGMKGAVACVMNFEDATGWLVGEPHRG---LHAMFTMMNVERLLLSAQGQGAAELAYQSS 312

Query: 332 LAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           LA A    + R +SG          +I  P ++R +  +        AL+  +    D A
Sbjct: 313 LAYARDRVQGRALSGAKYPTLAADPIIVHPDVRRMLLTMKAHAEGGRALALWVMKHVDIA 372

Query: 384 K------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +       R + +    +M P+ K W            ++  GG GYI E  + +  R+ 
Sbjct: 373 ERHPDPAEREKASDLVALMTPVVKVWLSDNGSEAANLGVQTFGGHGYIREWGMEQIVRDI 432

Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLE 473
               +  G+     LD++   L  KG +L  +L   ++
Sbjct: 433 RILQLYEGANGIQALDLVARKLPMKGGSLLLRLTDPID 470


>gi|325955394|ref|YP_004239054.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323438012|gb|ADX68476.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA 247
           P+ K        L+E   G+D  A + +   I  G  Y L+G K W  +   +  +I++A
Sbjct: 113 PLAKGEKIGAFCLSEPDAGSD--ATSQKTTAIDKGDYYLLNGTKNWITNGGTASTYIVIA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------F 295
           Q     G   +   + +    G      + K+G R + T  L F++             F
Sbjct: 171 QTHEEKGHRGINAFIVEKGWEGFEIGPKEQKMGIRGSDTHSLFFNDVKVPKENRIGEDGF 230

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           GF    +NV  G        I + S  + ++     LA  + YA+ R   G  +I+   +
Sbjct: 231 GFKFA-MNVLNGG------RIGIASQALGIAQGAYELA--LEYAKIRKAFGTEIINHQGV 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A +I AA  L  + A   DE K  SE  A A++ A  T  W       V  EA
Sbjct: 282 AFKLADMATNITAARMLCLKAAVEKDEGKDISESGAMAKLFASTTAMW-------VTTEA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  GG+GY+ E  + R  R++    I  G+     + +   + KG
Sbjct: 335 VQIHGGNGYVREYHVERMMRDAKITQIYEGTSEIQKIVISRSIAKG 380


>gi|257482485|ref|ZP_05636526.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 147/353 (41%), Gaps = 66/353 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D       PV             +++A  + A D+    +  F    + +   +R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                LD+L                L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|239983225|ref|ZP_04705749.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
 gi|291455056|ref|ZP_06594446.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
 gi|291358005|gb|EFE84907.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 34/262 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           ++E   G+DI+A+  +G+   DG  Y L G K W   +  +D + +  +  GR G   + 
Sbjct: 124 ISEAEAGSDISAMACRGRAHPDGSAYTLDGAKAWTSHAGQADYYNIFCRT-GRAGVRGLS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSN--ATVELEFSNTF----------GFLLGDLNVSTG 307
            LL   +  GL   R + K+G RS+  ATV L+ +             GFL     ++TG
Sbjct: 183 VLLAPATTRGLTTGRPERKMGVRSSPTATVTLDGAEVAADRMIGRPGKGFL-----IATG 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +  ++ I    A  +V     +L +A+ YAR+   SGG  ID   +   +AD++  +A
Sbjct: 238 LFDRGRLGI----AACAVGLATAALDQAVSYARKPRSSGGPAIDSQGLAFLLADLSTQVA 293

Query: 368 AATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AA AL    A + D     S    EAA A++ A  T       A  V  +AM+ +G    
Sbjct: 294 AARALVREAARTLDSGVRDSVVTAEAARAKLFATDT-------AMRVTTDAMQALGAHSA 346

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++    R  RE+    I+ G+
Sbjct: 347 GQDHPAERWMREAKLLQIIEGT 368


>gi|297201058|ref|ZP_06918455.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|197712157|gb|EDY56191.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
          Length = 608

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+ L D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399
                 P ++R++           AL    A   DE + +       + E A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTAAVQDEIQVKEAAGEDVTTENALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + A  ++A++++  GGSG+++E  I ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKAYELLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447


>gi|322420195|ref|YP_004199418.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320126582|gb|ADW14142.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 31/265 (11%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---- 250
           VA    LTE   G+D A +++  ++  D  + L+G K F++S P +  F++ A  +    
Sbjct: 121 VAGSFALTEAGAGSDTAGMSTSARRDGD-RWVLNGAKAFITSAPYAGVFVVWAVTDREAP 179

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303
               + CFLV    E G+P GL   R + K G R++AT  + F         L+G+LN  
Sbjct: 180 RGSGISCFLV----EPGTP-GLVIGREEEKTGQRASATCSVSFEECRIPVDALVGELNRG 234

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             V+ G +   +I I      +++     +L  A  YA +R   G  + +   ++  IAD
Sbjct: 235 YRVAVGELAGGRIGI----GSLALGVGLAALDFATGYASQRRQFGQKICNFQAIRWMIAD 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              ++ AA  L  + A   D  +  ++EA+ A++ A       C         A++ +GG
Sbjct: 291 AYTELEAARLLLMQAAYLKDAGRPFAKEASMAKLFATEAANRACY-------SAVQILGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GYI +  + R+ R+    SI  G+
Sbjct: 344 YGYIADFPVERYARDVRVTSIYEGT 368


>gi|229011604|ref|ZP_04168788.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|228749668|gb|EEL99509.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 575

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 132 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 177

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 178 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 234

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + +++ ++
Sbjct: 235 TATLILEDVVIPAENILG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAISLSV 288

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 289 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 348

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 349 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 408

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 409 LTVAKMLMK 417


>gi|228472001|ref|ZP_04056769.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276613|gb|EEK15326.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
          Length = 377

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 43/296 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           K W PK+ S E+              IG  G+TE   G+D   + +   K  +  + L+G
Sbjct: 108 KRWLPKLASGEH--------------IGAWGITEHNTGSDAGGMLTTAVKQGEE-WVLNG 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F++  +S   +++    G  G    +   ++E G+P G    +  +K+G R++ T E
Sbjct: 153 TKNFITHAISADVVVVIARTGEKGDKHGMTAFVVERGTP-GFSNGKKIDKLGMRASETAE 211

Query: 289 LEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
           L F N     + D N    V  G ++ MKIL   D   +S+  + +  A+     AI YA
Sbjct: 212 LVFQNC---RIPDQNRIGAVGEGFIQAMKIL---DGGRISIGALSLGTAKGAVKAAIQYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +I    +   +A+++ +I AA  +  + A+  +  +  +++AA A++ A  
Sbjct: 266 KERSQFGKPIISFQAIGFKLAELSTEIEAAELMLHKAAHLKETHQPVTQQAAMAKLYAS- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
               C K +     EA++  GG GY  +  + + YR++   +I  G G + +L ++
Sbjct: 325 --ELCVKASN----EAIQIHGGYGYTTDYPVEKFYRDAKLCTI--GEGTSEILKLV 372


>gi|224072021|ref|XP_002199716.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
           [Taeniopygia guttata]
          Length = 412

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTMARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 211 SAFLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDC---RIPKANLLGQPGMGFK 262

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA +R   G  +     ++  +AD+A+ + 
Sbjct: 263 IAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFKLADMAVALE 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L++R A   D  K  ++EAA A++ A        + A ++  +A++ +GG GY+ E
Sbjct: 323 GARLLTWRAAMLKDNGKPFTKEAAMAKLAA-------SEAATSIAHKAIQILGGMGYVTE 375

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               RHYR++    I  G+     L +   L K
Sbjct: 376 MPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 408


>gi|239820039|ref|YP_002947224.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804892|gb|ACS21958.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 592

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 56/321 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI S E+  T             + LTE   GTD+  + ++     DG Y ++G K 
Sbjct: 149 YLPKIASGEWAGT-------------MCLTEPNAGTDLGLMRTRAVAQPDGSYSITGSKI 195

Query: 234 FLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLEDGSPNG-----LCYQRLK 276
           F+S    D       ++LA+       V+G +  F+VP+ + D +        +    ++
Sbjct: 196 FISGGEQDLTENIMHLVLARMPDAPPGVKG-ISLFIVPKFIPDANGAAGARNAVVCGSIE 254

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTG----PVEDMKILIYLDSAIMSVSGMRVSL 332
           +K+G   N+T  + F    G+LLG  +         +  M++L+     ++++  M  + 
Sbjct: 255 HKLGIHGNSTCTINFDGATGWLLGAPHKGLAGMFVQMNHMRVLV----GMIAIGLMEAAY 310

Query: 333 AEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +A+ YA+ R     I           +I    ++R +     +I  A AL+   +   D
Sbjct: 311 QKALAYAKERLQGRAIGARPSGDAVDPIIGHADVRRMLLTQKANIEGARALALWTSQLSD 370

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 +   R+E A    ++ P+ K     +A      AM+  GG GYI E  + +H R
Sbjct: 371 VQRLHPDPAKRNETAELLGLLTPLVKALSSDLAVECTLLAMQVFGGHGYIRENGVEQHLR 430

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +     +  G+     +D+L 
Sbjct: 431 DVRIVGLYEGTNGVQAMDLLG 451


>gi|86360546|ref|YP_472434.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284648|gb|ABC93707.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 395

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 24/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  ++P++D F++ A
Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWA 185

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + E G +  F    +LE G   GL    +  K+G R++ T E+     F   + + N+  
Sbjct: 186 KTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLP 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           G          L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD
Sbjct: 238 GVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYVLERKQFGRPLAANQLIQKKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +IA       RL    +E     E       +  I K   C  A  +   A + +GG
Sbjct: 298 MAAEIALGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEMARAARDMLGG 350

Query: 422 SGYIEERSIARH 433
           +G  +E  IARH
Sbjct: 351 NGISDEFGIARH 362


>gi|78043397|ref|YP_360564.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995512|gb|ABB14411.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 384

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC--FLV 258
           LTE   G+D A+I +   K  D  Y L+G K F+++ P +D F ++A  +   G    + 
Sbjct: 126 LTEPEAGSDAASIRTTAVKKGDR-YILNGVKHFITNGPDADVFTIIAVTDKSKGAKGGIT 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
             ++E   P G     ++ K+G R + T E+          N  G      NV  G +  
Sbjct: 185 AFIVEKNFP-GFKVGTIEKKMGLRGSHTSEIILEDCEVPEENVLG------NVGEGYINA 237

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +KIL    +  A   V  M+  L  +  YA++R   G  +     ++  +A++A+DI A 
Sbjct: 238 LKILAKGRVGLAARCVGSMQKLLELSTRYAQQRVQFGKPISSFQAIQHMLAEMAVDIEAT 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              ++R+A   D+     +EAA  ++ A        +    V+ +A++  GG GY++E  
Sbjct: 298 RWFAYRVAWLVDQGAKVIKEAAAVKLFA-------SEAYGRVVDKAVQIFGGMGYMKEFP 350

Query: 430 IARHYRESPANSILLGS 446
           I R+YR++    I  G+
Sbjct: 351 IERYYRDARITRIYEGT 367


>gi|299536306|ref|ZP_07049619.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis
           ZC1]
 gi|298728292|gb|EFI68854.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis
           ZC1]
          Length = 594

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 59/363 (16%)

Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           S+T  + V + + P V        K + PK+ S E             +     LTE   
Sbjct: 109 SITHGAHVGIGSLPIVLFGNEDQKKKYLPKLASGE-------------LIAAYALTEPGS 155

Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264
           G+D + A T+     +   Y L+G K W  ++  +D F++ A+++G +   F+V R    
Sbjct: 156 GSDALGAKTTAKLNEAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFSAFIVER---- 211

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319
            + NG+     + K+G +S++T  L   +       LLG+  +  G +    IL      
Sbjct: 212 -AYNGVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHIIAFNILNIGRYK 268

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + ++ G + +L  AI Y  +R      L D  + K  ++ +A  + A+ +L++R    
Sbjct: 269 LGVGTIGGSKRALELAIQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGL 328

Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           F++  S+   EE    +++A           I K +  +    +  EA++  GG G++ E
Sbjct: 329 FEDRLSQLSLEEQKQGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388

Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475
             + R YR+S  N I  G+   N M++            L LL+   NL ++L   + ++
Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPEE 448

Query: 476 LGS 478
           +G+
Sbjct: 449 IGT 451


>gi|228991347|ref|ZP_04151304.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228768410|gb|EEM17016.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 571

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 52/356 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
           G+  + SV+    V + T P ++       + + PKI S E+              IG  
Sbjct: 101 GYAGAFSVSFNIHVGVGTLPYIYYGTNEQKEKYLPKIASGEW--------------IGAY 146

Query: 201 GLTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V
Sbjct: 147 ALTEPNAGSDALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
            R  E G   GL  +++   I   S AT+ LE       N  G       V  G    + 
Sbjct: 207 ERTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPVENVLG------EVGKGHYVALN 257

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           IL +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A +
Sbjct: 258 ILNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAES 317

Query: 372 LSFRLANSFDEAKSRSE-EAAYARIMAP------ITKYWCCKMAPAVIAEAMECIGGSGY 424
            ++R A   DEA   +  + +  R M+       I K    +    ++ EA++  GG GY
Sbjct: 318 AAYRTAGVIDEAIHETNGDGSIMRKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGY 377

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475
           ++E  + R YR++  + I  G+     L V  +L K     G  + E  F  +E++
Sbjct: 378 MQEYEVERLYRDARISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433


>gi|258511563|ref|YP_003184997.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478289|gb|ACV58608.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 593

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 47/275 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  +  +  +   DG  Y L+G K ++++   +D F++ A+V+G+    F+V
Sbjct: 148 LTEPNSGSDALSARTTAKLSEDGKYYILNGTKQYITNAGFADVFVVYAKVDGQHFSAFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +      G+ +   + K+G + ++T ++        +L D+ V   PVE++   +  
Sbjct: 208 ERTMP-----GVSFGPEEQKMGIKGSSTRQV--------ILEDVKV---PVENLLFEVGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               ++ G +V+L  +  YA  R   G  L + P+++R +A +  
Sbjct: 252 GHQIAFNILNIGRFKLGAGALGGSKVALETSAKYANERKQFGKKLSEFPLIQRKLARMNT 311

Query: 365 DIAAATALSFRLANSFDE-------------AKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            I A  ++ +R A   D               +S    A YA I   I K +  ++   V
Sbjct: 312 QIYALESVVYRTAGLLDAILETVDVTKPDSGVQSAKAIAEYA-IECSINKVFGSEVLDFV 370

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EA++  GG+G+I+E  + + YR++  N I  G+
Sbjct: 371 VDEAVQIHGGAGFIKEYGVEQMYRDARINRIFEGT 405


>gi|294665598|ref|ZP_06730878.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604647|gb|EFF48018.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 393

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 250

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 311 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 364 YFRDAKITEIYEGT 377


>gi|187922622|ref|YP_001894264.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713816|gb|ACD15040.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 387

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 53/307 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A +V    TP     + PK  + E+               G+GLTE   GTD+ AI +  
Sbjct: 97  AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271
           +++ D  Y ++G+K W  +S   +   +L + +        PR      LL    P G  
Sbjct: 144 KRVGDE-YIVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHLGMSLLLVQKGP-GFE 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324
             R   K+G +   T EL F         D +VST    G VE     +IL  L+   ++
Sbjct: 198 VSRQLEKLGYKGIDTCELSFH--------DYHVSTDALIGGVEGRGLQQILGGLELGRIN 249

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V +A     E++ Y+++R   G  + +   ++  + ++A  + A   L    A  
Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAKK 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D  +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P 
Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSVEAMRIHGAYGYSKEYNVERLYRDAPL 362

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 363 LTIGEGT 369


>gi|78047161|ref|YP_363336.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035591|emb|CAJ23258.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|297564550|ref|YP_003683522.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296848999|gb|ADH62014.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 394

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 41/279 (14%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
           GLTE   G+D AA+ ++ Q+  +G + ++G K F++   ++  +++ A+ +        P
Sbjct: 132 GLTEPGSGSDAAAMRTRAQETPEG-FVINGSKQFITQGSVAGVYVINARTD--------P 182

Query: 260 RLLED------------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              ED            G   GL   R + K+G  S+ T +L F +        L V   
Sbjct: 183 APSEDKKHLGLSAFVFYGPVEGLRIGRKEEKLGLHSSDTAQLLFEDLHLEKDALLGVRGK 242

Query: 308 PVEDMKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              D  +L  LD      A +SV   R +L  A  YA  R   G  + +   +   +A++
Sbjct: 243 GFYD--VLRVLDGGRIGIAALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEM 300

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  L  R A   D  +  S EAA A++ A       C        EA++ +GG 
Sbjct: 301 ATNLEAARLLYLRAAELKDAGRPFSGEAAQAKMFASEVAVRACD-------EAIQILGGY 353

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLL 458
           GYI+E  + R++R+  A  + +G G   VL V+   NLL
Sbjct: 354 GYIKEYPVERYWRD--ARLMRIGEGTTEVLKVIIARNLL 390


>gi|110833849|ref|YP_692708.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646960|emb|CAL16436.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 22/272 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     +   + ++E   G+D+AA+ +   K  D  Y ++G K W  +SP +D F +LA
Sbjct: 112 APAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDD-YVINGTKMWITNSPSADFFCLLA 170

Query: 248 QV-EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
              +G+        +VP+        G+   +  NK+G R + T ++ F N       L+
Sbjct: 171 NTSDGKPHVNKSLIVVPK-----DAGGITVDKPLNKLGMRCSETAQVFFDNVRVPQRNLI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G   +             L +A  S+ GM   + E I YA+ R + G  LID   +   +
Sbjct: 226 GQEGMGFMMQMMQFQEERLFAAANSLKGMEHVIDETIAYAKDRKIFGMPLIDNQSVHFRL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++ +  AL++R    +   K   + A+ A++          +++  V    ++  
Sbjct: 286 AELQSEVESLRALTYRACEMYVNGKDVLQLASMAKLK-------VGRLSREVADSCLQYW 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG+G++ E    + +R+    SI  G+   M+
Sbjct: 339 GGNGFMWENPAGQLFRDGRLGSIGGGADEIML 370


>gi|83648023|ref|YP_436458.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636066|gb|ABC32033.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 599

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 50/328 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   G+D+  + S+ +  +DG Y ++G K 
Sbjct: 150 YLPKLVSGEWTGT-------------MCLTEPHCGSDLGILRSKAEPNADGSYSITGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL--EDGS---PNGLCYQRLKN 277
           F+S+   D       I LA++    +G  G   F+VP+ L  EDGS    N +    +++
Sbjct: 197 FISAGEHDMAENIVHICLARLPDAPQGTKGISLFIVPKFLVNEDGSLGERNSVTCGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   N+T  + F    G+L+G  N     +        L +AI  +S   +S   A+ 
Sbjct: 257 KMGIHGNSTCVMNFDGAKGYLIGPENKGLACMFTFMNFARLGTAIQGLSASELSFQGALT 316

Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381
           YA+     R +SG          +I  P ++R +         + AL +  A   D    
Sbjct: 317 YAKDRLAMRSLSGVKNPNGPADPIIVHPDVRRMLLTQKAFTEGSRALIYYTAVQGDFVHH 376

Query: 382 --EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               + R+E       + PI K +  ++        M+  GG G+I E  + +  R++  
Sbjct: 377 GATEEVRNEADELMGFLTPIAKAFLTEIGYESANLGMQVYGGHGFISEWGMEQIVRDTRI 436

Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464
             +  G+     LD+L    L+ +G +L
Sbjct: 437 ALMYEGTTGIQALDLLGRKILMTQGESL 464


>gi|302533278|ref|ZP_07285620.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442173|gb|EFL13989.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 390

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A++T++  +  D  + ++G K W     ++D + +LA+  G  G   +  
Sbjct: 133 LSEPAAGSDAASLTTKAVRDGD-EWVITGTKAWITHGGVADFYTVLART-GAPGAKGITA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            L  G   GL     + K+G + + T +L F    G  + D        +   I L  LD
Sbjct: 191 FLVPGDAPGLTAAVPEKKMGMKGSPTAQLHFD---GVRVPDSRRIGEEGQGFTIALAALD 247

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  AL  
Sbjct: 248 AGRLGIAACAIGVAQAALDEAVSYALGRKQFGHPIADFQGLRFMLADMATKIEAGRALYL 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  K  S +AA A       K +C   A AV  +A++ +GG GY  +  + R  
Sbjct: 308 AAARLRDAGKPFSRQAAMA-------KLFCTDAAMAVTTDAVQILGGYGYTADFPVERLM 360

Query: 435 RESPANSILLGS 446
           RE+    I+ G+
Sbjct: 361 REAKVLQIVEGT 372


>gi|187927802|ref|YP_001898289.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187724692|gb|ACD25857.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 397

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPASMITRARKV-DGGYSLSGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351
             + + N+  G          L+SA   ++   +  AEA  +  R++V      G  L  
Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAA 290

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 NQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365


>gi|329939155|ref|ZP_08288529.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302040|gb|EGG45933.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 383

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 53/306 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   +    + W P + + EY  +              GLTE   G+D   +T++ 
Sbjct: 95  AKTIAAWGSEEQKRHWLPGLVAGEYVGS-------------FGLTEPGTGSDAGNLTTRA 141

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
            +   G + L+G K F+++   +D  ++ A+     G      FLVP      SP GL  
Sbjct: 142 VR-EGGDHVLNGTKTFITNGTWADVILLFARSTDAPGHKGVTAFLVPA----DSP-GLTR 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSV 325
           + +  K+G R  AT EL        +L D+ V      GP E     + + +     MSV
Sbjct: 196 RTIHGKLGLRGQATAEL--------VLQDVRVPASAMLGP-EGKGFSVAMSALAKGRMSV 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  
Sbjct: 247 AAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIAVDVDAARLLTWRVADLV 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     + EA+ A++ A        + A      A++  GG GYI+E  + +  R++   
Sbjct: 307 DRGLPFATEASKAKLFA-------SEAAVRSANNALQVFGGYGYIDEYPVGKLLRDARVM 359

Query: 441 SILLGS 446
           ++  G+
Sbjct: 360 TLYEGT 365


>gi|297624543|ref|YP_003705977.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165723|gb|ADI15434.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 381

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 48/267 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D AAIT++ +K+  G Y LSG K W  S   +  ++++A+ +   G     C
Sbjct: 125 LSEPHAGSDAAAITTRARKVEGG-YVLSGTKAWITSGGEAQVYLVMAKTDPSAGPRGVSC 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V    + G+P G+ + + + K+G  +  T  + F + F   G L+G         +  
Sbjct: 184 FVV----DKGTP-GMHFGKPEEKLGQHAATTTSVIFEDCFVPDGALVGP--------KGQ 230

Query: 313 KILIYLDSAIMSVSGMRVSL-AEAI------------HYARRRHVSGGILIDQPVMKRAI 359
            ++I L+    S+ G R+ + A+A+            +   RR     I   Q V  + +
Sbjct: 231 GLVIALE----SLDGGRIGIAAQAVGIARAALEAALAYAGERRTFGKPIREHQGVAFK-L 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA  L+ R A   D     ++EA+ A++ A  T       A  V   A++ +
Sbjct: 286 ADMATRVDAARLLTQRAAWLKDHGYRVTQEASMAKLFASET-------ASFVTHAALQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY ++  + R++R++    I  G+
Sbjct: 339 GGYGYSKDYPVERYFRDARVTEIYEGT 365


>gi|260553825|ref|ZP_05826094.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405035|gb|EEW98536.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 406

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLSGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+ ++IA     + R     DE  +  E  +       + K   C
Sbjct: 293 GRPLAANQLIQKKLADMQMEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373


>gi|225378408|ref|ZP_03755629.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM
           16841]
 gi|225209742|gb|EEG92096.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM
           16841]
          Length = 384

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 31/263 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251
             LTE   GTD  A  +Q + + DG  + L+G K F+++  ++D +I++A         G
Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R        ++E G+P G  +   + K+G R ++T EL F +       LLG       P
Sbjct: 181 RKKKNFSAFIVEKGAP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKDALLGPEGKGF-P 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +     +  LD   + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A
Sbjct: 239 I----AMHTLDGGRIGIASQALGIAEGALERAIAYTKERKQFGRSIAQQQNTQFKLADMA 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L ++ A +    K  S EAA A++ A  T       A AV  E ++  GG G
Sbjct: 295 TRIEAAQMLVYKAAMAKANQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYG 347

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI E  + R  R++    I  G+
Sbjct: 348 YIREYDVERMMRDAKITEIYEGT 370


>gi|146307662|ref|YP_001188127.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575863|gb|ABP85395.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 17/261 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + L +TE  GG+D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   
Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRISGSKTFITSGVRADYYTVAVRTGGEGFGG 183

Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           V  LL E G+P G    R   K+G  ++ T EL F +       L+G  N     +    
Sbjct: 184 VSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMANF 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  AIM+    +++L E++ +AR R   G  +    V+K  +A++A  +  +   +
Sbjct: 243 QSERLSLAIMANMTAQLALEESLKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREFT 302

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A      +S  +E + A       K +   +A  +  +A++ +GG GY+ E  + R 
Sbjct: 303 YRQAAQMAAGRSVIKEISMA-------KNFATDIADRLTYDAVQIMGGMGYMRESLVERL 355

Query: 434 YRESPANSIL-LGSGNAMVLD 453
           YR+   N IL +G G   +++
Sbjct: 356 YRD---NRILSIGGGTREIMN 373


>gi|157140168|ref|XP_001647622.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108866505|gb|EAT32290.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 378

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255
           LTE   G+D  AIT++  +  D  + L+G K F+++     M+  F +  +  G+ G  C
Sbjct: 123 LTEPHTGSDAGAITTRADRDGDS-FVLNGVKQFITTGKHAHMAIVFAVTDKAAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP      +  G    R ++K+G  ++ TV++   N       LLG       ++   
Sbjct: 182 FLVPT-----ATPGFIVGRTEDKMGQHASDTVQIILENCRVPASSLLGKEGEGYRIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  S+   R +   A+ YA+ R   G  +I+   +   +AD+   + A
Sbjct: 237 LEAGRIGI----AAQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              + +R A   D  K   +EA+ A++ A        + A  + ++A++  GG GY  + 
Sbjct: 293 GRLMVWRAAQLKDAGKPCLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRISQIYEGAND 365


>gi|260904522|ref|ZP_05912844.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 27/268 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253
           + LTE  GG+D+ A+ +   K  +  Y ++G K W  ++  SD   +L + +        
Sbjct: 120 MALTEPGGGSDLQALRTAAAKDGED-YVINGSKTWITNARKSDLIALLCKTDPSAEPRHK 178

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           G  ++  L+E G   G    +  +K+G +   T EL F N       LLG +    G  +
Sbjct: 179 GISII--LVEKG--EGFTVSKNLSKLGYKGVETCELVFENLRQPQSQLLGSVE-GVGFKQ 233

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  S+   + +L +A+ Y++ R   G  +     +   +A +A  + A
Sbjct: 234 MMKGLEIGRIQVASRSLGVAQAALNDAVKYSQERESMGKPIWRHQAVGNQLAKMATKLEA 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A ++D  +    EA  A       KY+  +MA  V  +A+   GG GY  E 
Sbjct: 294 ARQLVLHAARTYDSGERVDMEAGMA-------KYYASEMAAEVALDAIRVHGGYGYSTEY 346

Query: 429 SIARHYRESPANSILLGSG-NAMVLDVL 455
            + R+YR++P   +++G G N + L V+
Sbjct: 347 DVERYYRDAPL--MIVGEGTNEIQLGVI 372


>gi|319791031|ref|YP_004152671.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593494|gb|ADU34560.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 386

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 33/324 (10%)

Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y MA  EA GH+    V  A  V   M TP + + +      RE+     AP        
Sbjct: 67  YAMAMAEALGHVSCGGVPMAIGVQTDMCTPALAR-FGSDELRREF----LAPAIAGDTVG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV--- 253
            +G++E   G+D+A + S  +K  D  Y +SG K W  +S  +D   ML    +G V   
Sbjct: 122 CIGVSEPGAGSDVAGLKSHARKDGDD-YLISGQKMWITNSLQADWMCMLVNTSDGPVHRN 180

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
               +VP      SP G+   +   KIG  S+ T  + F N      + +G+     G V
Sbjct: 181 KSLVMVPM----DSP-GIEKAKKIRKIGMNSSDTGLIYFDNVRVPQRYRIGE--EGQGFV 233

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+      L +A  S+  M   +A+ I +A++RH+ GG L DQ  ++  +A++  ++ 
Sbjct: 234 YQMQQFQEERLWAAASSLEPMEDCIAQTIEWAQQRHMFGGTLADQQWVQFKLAELKTEVE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  AL++R  +   + +   E A+ A++          ++   V    ++  GG G+  E
Sbjct: 294 ALRALTYRACDLHVQGEDVLELASMAKLKT-------GRLTRQVSDTCLQFWGGMGFTLE 346

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             ++R YR+    SI  G+   M+
Sbjct: 347 NRVSRLYRDGRLGSIGGGADEVML 370


>gi|294624408|ref|ZP_06703099.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601292|gb|EFF45338.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 393

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++        L V     E  K  +  
Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 250

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 311 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 364 YFRDAKITEIYEGT 377


>gi|195157174|ref|XP_002019471.1| GL12205 [Drosophila persimilis]
 gi|198454807|ref|XP_001359731.2| Arc42 [Drosophila pseudoobscura pseudoobscura]
 gi|194116062|gb|EDW38105.1| GL12205 [Drosophila persimilis]
 gi|198132962|gb|EAL28883.2| Arc42 [Drosophila pseudoobscura pseudoobscura]
          Length = 405

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   +  D  Y L+G K W  +   + A ++ A    +     +  
Sbjct: 147 LSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISA 205

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+VP+ L+     G    + ++K+G R ++T +L F +       +LG+      P    
Sbjct: 206 FIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLGE------PGFGF 254

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L +
Sbjct: 255 KIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAM 314

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  ++ ++EAA A++ A      C         + ++ +GG GY+ 
Sbjct: 315 ESARLLTWRAAWLKDNKQAYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVA 367

Query: 427 ERSIARHYRESPANSILLGS 446
           +    RHYR++    I  G+
Sbjct: 368 DMPAERHYRDARITEIYEGT 387


>gi|293609182|ref|ZP_06691485.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829755|gb|EFF88117.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 402

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 118 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 176

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 177 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 234

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F     +  ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 235 VFVPEENVFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 288

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 289 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 341

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 342 GKALDIARMARDMMGGNGISDEFGVARH 369


>gi|153953270|ref|YP_001394035.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri
           DSM 555]
 gi|219853903|ref|YP_002471025.1| hypothetical protein CKR_0560 [Clostridium kluyveri NBRC 12016]
 gi|146346151|gb|EDK32687.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri
           DSM 555]
 gi|219567627|dbj|BAH05611.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 562

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 30/280 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+         GLTE   G+D A  T     +    Y ++G K F+++   +D +++ A 
Sbjct: 113 PLASGKKIAAFGLTEPNAGSD-AGKTETTAVLEGDHYVINGSKVFITNADYADTYVIFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G  +    NK+G RS+AT EL F N     +   N+    
Sbjct: 172 TTPGLGTKGISAFIIEKGMDGFTFGTHYNKMGIRSSATAELLFKN---LKVPKYNLLGKE 228

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMK 356
            E  KI      A+ ++ G R+ +A            +A+ Y++ R   G  +  Q  + 
Sbjct: 229 NEGFKI------AMQTLEGGRIGIAAQALGIAQGAYEKALSYSKERVQFGKPISRQQSIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  + +  A    E K+   E+A A++       +   +   V+ +A+
Sbjct: 283 FKLADMATKIRAARFMVYSAAVLKQEHKNYGMESAMAKL-------YASDICLEVVNDAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GGSG+I+   + R YR++   +I  G+     L + N
Sbjct: 336 QIYGGSGFIKGFPVERMYRDAKICTIYEGTNEIQRLIISN 375


>gi|42781443|ref|NP_978690.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|42737365|gb|AAS41298.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
          Length = 569

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 23/273 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +      DG  + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKQMSQFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R YR++  + I  G+     L V  +L K
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMK 411


>gi|148265075|ref|YP_001231781.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398575|gb|ABQ27208.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 31/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GR- 252
             LTE   G+D A +T+   +  DG + L+G K F++S P +  F++ A  +     G+ 
Sbjct: 125 FALTETGAGSDPAGMTTTAVQDGDG-WLLNGSKIFITSAPYAGVFVVWAVTDRSAPKGKG 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VS 305
           + CFLV    E G P GL   + + K+G  ++AT EL F N       L+G LN    ++
Sbjct: 184 ISCFLV----EQGVP-GLIIGKQEEKMGQHASATNELIFDNCRIPKNALMGKLNDGFRIA 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +   +I I      + ++ M      A  YA  R   G  + D   ++  IAD   +
Sbjct: 239 VGELAGGRIGIGSLGLGLGLAAMDF----ATRYATERSQFGQKISDFQAIQWMIADAYTE 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A   +  KS ++EA+ A++ A       C        +A++ +GG GY 
Sbjct: 295 LEAARLLLMNAAFRKETGKSFAKEASMAKMYATEAANKACY-------KAVQMLGGYGYT 347

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R+ R++   SI  G+
Sbjct: 348 KDFPVERYARDARITSIYEGT 368


>gi|197122598|ref|YP_002134549.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172447|gb|ACG73420.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLV 258
           L+E + G+D  A+ ++  +   G       +W  S  ++   ++ A+    EG  G  + 
Sbjct: 125 LSEPQAGSDAGAMRTRAVRRGGGWVIDGAKQWITSGDVAGVLVVWARTGPAEG--GGGVT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
             L+E G+P GL   R ++K+G R+++TV L F       S   G +   L V+   ++ 
Sbjct: 183 AFLVEAGTP-GLQVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDG 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++ I    A  +   +R +L  ++ YAR R   G  + +   +   +AD A++   A  
Sbjct: 242 GRVGI----ASQATGTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADTAVEHDTARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ R A   +  +  + EA+ A       K W  + A   +  A++  GG GY E+  +A
Sbjct: 298 LALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVA 350

Query: 432 RHYRESPANSILLGS 446
           R++R++   +I  G+
Sbjct: 351 RYFRDARVQTIYEGT 365


>gi|115377697|ref|ZP_01464890.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821553|ref|YP_003953911.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115365303|gb|EAU64345.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394625|gb|ADO72084.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 29/287 (10%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           ++F  E       P   T   +G  GLTE   G+D + + +   +  D  + L+G K F+
Sbjct: 99  RVFGNEAQKRKYLPKLATGEWLGAWGLTEPGSGSDASGLRATAVRQGDA-WVLNGAKMFI 157

Query: 236 S-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +   + DAF++LA    E R    +   +LE G   G   + +  K+G RS+ T EL   
Sbjct: 158 TQGTVGDAFVVLALTSPEKRQKG-ITAFILEKGM-KGFSQRPIHGKLGMRSSDTAELILE 215

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHV 344
           N        LG+  V  G ++ +KIL   D   +++  +     R +L E++ YAR R  
Sbjct: 216 NVEVPDSQRLGE--VDRGFIDTLKIL---DKGRITIGALAVGLGRGALEESVRYARERSA 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +   ++   AD+  ++ AA  L  R A+  D+ +  ++ A+ A++ A       
Sbjct: 271 FGQPIAEFQGLRWMFADMKTELDAARLLVHRAASMADQNQPYTQAASMAKLFASEAATRA 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           C        +A++  GG GY  E  + R+ R++    I  G G + V
Sbjct: 331 CN-------KAVQIHGGYGYTREFPVERYLRDAKLCEI--GEGTSEV 368


>gi|332285779|ref|YP_004417690.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
 gi|330429732|gb|AEC21066.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
          Length = 384

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 24/248 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCF 256
             LTE   G+D A++ +   +  D  Y L+G K F++ +P +D F ++A+ +   R G  
Sbjct: 122 FALTEPGSGSDAASLRTTAVRDGDH-YILNGTKRFITNAPEADVFTVMARTDPAARGGSA 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E  +  GL   ++  K+G R   T ++   +       L+G      G    MK
Sbjct: 181 ISAFVVEKNTA-GLSLGKIDKKMGQRGAHTCDVVLEDCRVPAANLIGGRE-GVGFKTAMK 238

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +L   D   + ++ + V +AE     A+HYA  R   G  + +  +++  +AD   +I A
Sbjct: 239 VL---DKGRLHIAAVSVGVAERMLNDALHYAMEREQFGQPIAEFQLIQAMLADSKAEIYA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ++    A   DE +  S EA+        +K +  +M   V   A++  GG+GY+ + 
Sbjct: 296 ARSMVIDAARRRDEGQDVSTEAS-------CSKLFATEMCGRVADRAVQIYGGAGYVSDY 348

Query: 429 SIARHYRE 436
            I R YR+
Sbjct: 349 GIERFYRD 356


>gi|330505673|ref|YP_004382542.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919959|gb|AEB60790.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 392

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 114 FGNEATKQKYLPKLASGEYIGCFGLTEPNHGSDPGSMVTRAKKVEGG-YRLTGSKMWITN 172

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 173 SPIADVFVVWAKDDAGEIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 227

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   D+    GP         L+SA   +S   +  AE     A  Y   R+  G 
Sbjct: 228 CPEENAFPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRNQFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 282 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  IARH
Sbjct: 335 ALDIARMARDMLGGNGISDEFGIARH 360


>gi|325524811|gb|EGD02776.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 395

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K++ G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YSLSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               L+ +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PDENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|207724418|ref|YP_002254815.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206589639|emb|CAQ36600.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           I   LTE   G+D A++ ++     D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N   +   L+G +    G  
Sbjct: 179 ISAFIVP-----ADAPGITLGKPDRKMGQRGTKTCDVMLDNVRVSAANLIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A  YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLVTDAAAYAKARRQFGRPIADFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK    +     ++A   K +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDGARRYD-AKPAGRQDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E  + R YR+
Sbjct: 349 IAEYKVERFYRD 360


>gi|218781113|ref|YP_002432431.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762497|gb|ACL04963.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 149/370 (40%), Gaps = 71/370 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252
           + LTE + G+ +A IT+      DG Y + G K F+S+   D       +MLA++EG   
Sbjct: 162 MALTEPQAGSSLADITTTAYPQEDGSYKIKGQKVFISAGDHDGVENIVHLMLAKIEGAPP 221

Query: 253 ----VGCFLVP--RLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
               +  F+ P  R   DG    N +   ++ +K+G R     EL   +     G+L+G 
Sbjct: 222 GVKGISLFVAPKYRPTADGKLEYNDIAVSQVFHKMGYRGAPITELAIGDKGECVGWLVGK 281

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGGIL------- 349
                 P   +K +   ++ A + V     S+A A +YA     ++   G  L       
Sbjct: 282 ------PHHGLKYMFQMMNGARLDVGNAATSIACAAYYASLDYAKQRPQGRKLGQKDLSK 335

Query: 350 -----IDQPVMKRAIADIALDIAAATALSFRL--ANSFDEAKSRSEEAA----YARIMAP 398
                I+   +KR +      +  + +L  +       + A +  EEA        I+ P
Sbjct: 336 PQVSIIEHADVKRMLLQQKAIVEGSLSLILQCHKYEDLETAAADPEEAEKYNLLCEILTP 395

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K +  +M     + A++C+GG GY ++  + ++YR+   + I  G+     +D+L   
Sbjct: 396 IAKTYPSEMGIISTSNAIQCLGGYGYCQDFPVEQYYRDIRIHPIHEGTTGIQGMDLL--- 452

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
                                G+KV+ +   +  L KE+      + E+  +    A L 
Sbjct: 453 ---------------------GRKVVMLEGKAFKLFKEEMEKTLVMAEESDVYKEYAGLL 491

Query: 519 RAGMNDIADV 528
           R  + DI +V
Sbjct: 492 RDALADIEEV 501


>gi|126739624|ref|ZP_01755316.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719270|gb|EBA15980.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 31/324 (9%)

Query: 135 IRAARLYLMAQLEAGHL---MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +RAA    MA+  AG +   M+    S   +A +    + +   P+I S E   +     
Sbjct: 70  LRAAYSEEMARCGAGGVTAAMAGRTISVEPIARLACDEIRERVLPEILSGEKGSS----- 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV 249
                   LG+TE  GG+D+A + +  ++  DG  + L+G K F++  M SD F++ A+ 
Sbjct: 125 --------LGVTEPGGGSDVANLKTTARR--DGNHWVLNGSKTFITGGMTSDYFVIPART 174

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG--NRSNATVEL-EFSNTFGFLLGDLNVST 306
            G+ G   +     +    G     L  K+G      AT+ L E       ++G+     
Sbjct: 175 GGK-GLAGISLFFVEADTAGFSRSPLPRKMGWWCSDQATLYLDEVRVPASHMMGEEGTGF 233

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +   +  L+     +  M+  L ++I +A+ R   G  LI+  V++  IA+++  I
Sbjct: 234 LAIMNNFNMERLNLIAAVLGMMKACLEDSIAWAQDRETFGQKLIEHQVIRHKIAEMSARI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  AL   +    +E +    E + A+  A     +C        +EAM+ +GG+GY+ 
Sbjct: 294 DAVEALLRMICWQVNEGEMPVAELSKAKFFATKACEFCA-------SEAMQILGGAGYLR 346

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
              + R YRE    +I  GS   M
Sbjct: 347 GNRVERIYREVKVMAIGGGSEEIM 370


>gi|229541829|ref|ZP_04430889.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326249|gb|EEN91924.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 403

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+A I +  +K  D  Y L+G K W     ++D F++ A 
Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAGIGTTAEKDGD-FYILNGQKTWISLCDVADHFLVFAY 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +       +  F+V R +      G   + +K K+G R+  T EL F N     +   N
Sbjct: 172 TDKAKKHHGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 223

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD+   +V+      ++  L  ++ Y   R   G  +    ++++
Sbjct: 224 LLGEEGEGFKIAMSALDNGRFTVAAGACGLIQACLEASVKYCHERKTFGHEIGKHQLVQQ 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA +      +  L FR     ++ K  + E + A       K+  C  A     +A++
Sbjct: 284 MIAKMEAGYQMSRLLVFRAGELKNQGKRNTRETSLA-------KWQACDFANEAANDAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY  E  + R+ R S A  I  G+
Sbjct: 337 IHGAYGYSSEYPVERYLRNSKAPVIYEGT 365


>gi|78044080|ref|YP_360183.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996195|gb|ABB15094.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 381

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254
            GLTE   G+D  ++ +   +  D  Y L+G K F+++   ++ +++ A V+   G    
Sbjct: 123 FGLTEPSAGSDAGSLKTTAVRDGD-YYILNGSKIFITNGGEAEIYVVFATVDKSKGHRGI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E G+P G  + + + K+G RS+ TVEL F N     +   N+     +  K
Sbjct: 182 SAFIV----EKGTP-GFSFGKKEKKLGIRSSPTVELVFENC---RIPKENLLGEEGQGFK 233

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  LD   + ++   V +A+     A+ YA+ R   G  + +   +   +AD+A  I 
Sbjct: 234 IALSTLDGGRIGIAAQAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQ 293

Query: 368 AATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           AA  L +  A    N+    K+           A + K +  + A  V  +A++  GG G
Sbjct: 294 AARLLVYHAAWLESNNLPYGKA-----------AAMAKLFASETAMEVTTKAVQIFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R  R++    I  G+
Sbjct: 343 YTREYPVERMMRDAKITEIYEGT 365


>gi|313886903|ref|ZP_07820606.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923600|gb|EFR34406.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 577

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +     +D  + L+G K F+++  S+  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSNIHLVLARSEEGTKDA 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G +   T EL F +    L G+  +  G +    ++
Sbjct: 231 RGLSMFIYDAKKGGVTVRRIENKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + +    V ++EA +     YA  RH  G  +   P +   +A I     A  
Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDKFPAVYEMLALIRAKADATR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           A  +  +   D  K+              R E+  Y+R+     PI K    ++A   + 
Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           + ++  GGSGY+++ +  R YR+    +I  G+    V+  +  +  GT      F+ LE
Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461

Query: 474 Q 474
           +
Sbjct: 462 E 462


>gi|296392632|ref|YP_003657516.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296179779|gb|ADG96685.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 611

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 51/300 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEG-RVG 254
           LTE   G+D+ A T++  +  DG + + G K F++S  S  +      ++LA+ EG R G
Sbjct: 164 LTEPDAGSDVGAGTTKAVEQPDGTWHIEGVKRFITSATSGDYFDNIFHLVLARPEGARAG 223

Query: 255 C-----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
                 F VP+   D      G  NG+    +++K+G +++AT EL F        G+L+
Sbjct: 224 TKGLSLFFVPKWHYDFEKRERGERNGVFVTGVEHKMGIKASATCELTFGQHGKPAVGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G ++         +E+ ++LI     I S++ +  +   A+ +A+ R V G         
Sbjct: 284 GGVHDGIAQMFDVIENARMLI----GIKSIATLSTAYLNALEFAKER-VQGSDFTQMLNK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARI 395
                 ++  P ++R++ +         AL    A   D A ++      E+ AY     
Sbjct: 339 DAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLLAAAYQDPAVAQRLFGADEDLAYRVNDF 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +  +   A +A++++  GGSG++++  I ++ R++  +++  G+     LD  
Sbjct: 399 LLPIVKGFGSEQGYAHLADSLQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQSLDFF 458


>gi|149201869|ref|ZP_01878843.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149144917|gb|EDM32946.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++ + G Y L+G K F+S    SDA+I++ +  G     +   
Sbjct: 124 LTEPGSGSDAAALKTRAERTNAG-YTLNGTKAFISGGGYSDAYIVMVRTGGDGPKGISTV 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
            +E G+  GL Y  L++K+G RS  T +++F N         N+S   +  ED K   Y 
Sbjct: 183 YVEAGT-EGLSYGGLEDKMGWRSQPTRQVQFDNC--------NISAENLVGEDGKGFTYA 233

Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+ A  S+   +  L + + Y   R   G  +     ++  +AD+ +++ AA
Sbjct: 234 MNGLDGGRLNIAACSLGAAQQGLTQTLAYMAERRAFGKPIDQFQALQFRLADMEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D       +A  A     + K +  +    V+ + ++  GG GY+ +  
Sbjct: 294 RTFLRQAAWKLD------NDAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           I +  R+   + IL G+   M L V
Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372


>gi|94494915|ref|ZP_01301496.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425181|gb|EAT10201.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 24/256 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           L ++E   G+D+ ++  + ++   G Y L G K W  ++P +D  ++ A+  EG  G  +
Sbjct: 128 LAMSEAGAGSDVVSMKLKARETDKG-YVLDGTKYWITNAPYADTLVVYAKTGEGSRG--I 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              L+E G       Q++ +K+G R + T EL F        N  G L G + V    ++
Sbjct: 185 TAFLIEKGMAGFSIGQKI-DKVGMRGSPTAELVFDGCEVPRENVMGPLNGGVGVLMSGLD 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + ++    A + +  M+  L   I Y R R   G  +    +M+  +AD+ + + +A 
Sbjct: 244 YERAVL----AGIQLGIMQACLDTVIPYVRERKQFGQPIGSFQLMQAKVADMYVALNSAR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A S D  K+   +AA A ++A        + A  V  EA++ +GG+GY  +  +
Sbjct: 300 AYVYAVARSCDAGKTTRFDAAGAILLA-------SENAVRVALEAVQALGGAGYTRDWPV 352

Query: 431 ARHYRESPANSILLGS 446
            R+ R++    I  G+
Sbjct: 353 ERYMRDAKLLDIGAGT 368


>gi|322705809|gb|EFY97392.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 447

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 33/299 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K W PK+               T+      L+E   G+D  A+ ++ ++ +DG     
Sbjct: 170 LKKKWLPKL--------------ATNTVASFCLSEPVSGSDAFALATRAEETADGFKING 215

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G  W  +S  ++ FI+ A ++   G   +   ++E G+P G    + + K+G R+++T  
Sbjct: 216 GKMWITNSKEAEFFIVFANLDPSKGYRGITAFVVEKGTP-GFSIAKKEKKLGIRASSTCV 274

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA-RR 341
           L F +    ++   N+     +  K  I  L+   + ++     LA      A+ Y    
Sbjct: 275 LSFDDV---VVPKENILGERGQGYKYAISLLNEGRIGIAAQMTGLALGSFENAVKYVWND 331

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G ++ +   M+  IA    +IAAA AL +  A   +  +   ++AA A++      
Sbjct: 332 RKQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGEDFVKDAAMAKL------ 385

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 386 -YASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 443


>gi|320321950|gb|EFW78046.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330944|gb|EFW86918.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330872175|gb|EGH06324.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D       PV             +++A  + A D+    +  F    + +   +R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|262278703|ref|ZP_06056488.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259054|gb|EEY77787.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 43/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   G+D+  I ++ +   DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225

Query: 251 GRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   D        N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVDDEGNLQDRNQVVCSAIEHKMGIHGNATCVLNFDGAQGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  +S +++    +       + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFAEGGRALAYFLAQHVDIVESSADQEQQKQSDNLLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLNSEGKLL 465

Query: 459 EKGTNLFEQL 468
           +  T+L +Q 
Sbjct: 466 KNMTDLIDQF 475


>gi|229000129|ref|ZP_04159699.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|228759666|gb|EEM08642.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 379

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDALGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATSVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|228469299|ref|ZP_04054325.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3]
 gi|228309198|gb|EEK17800.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3]
          Length = 576

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +     +D  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSDIHLVLARSEEGTKDA 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R+++K+G +   T EL F +    L G+  +  G +    ++
Sbjct: 231 RGLSMFIYDAKKGGVTVRRIEHKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + +    V ++EA +     YA  RH  G  +   P +   +A I     A  
Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDKFPAVYEMLALIRAKADATR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           A  +  +   D  K+              R E+  Y+R+     PI K    ++A   + 
Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           + ++  GGSGY+++ +  R YR+    +I  G+    V+  +  +  GT      F+ LE
Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461

Query: 474 Q 474
           +
Sbjct: 462 E 462


>gi|254386287|ref|ZP_05001596.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345141|gb|EDX26107.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           L+E   G+D A++T++  +  D  + ++G K W     ++D + +LA+        +  F
Sbjct: 133 LSEPAAGSDAASLTTKAVRDGD-EWVITGTKAWITHGGVADFYTVLARTGAPGPKGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G   GL     + K+G + + T +L F    G  + D        +   I L
Sbjct: 192 LVP-----GDVEGLTAAVPEKKMGMKGSPTAQLHFD---GVRVPDSRRIGEEGQGFTIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 AALDAGRLGIAACAVGVAQAALDEAVTYALDRKQFGHPIADFQGLRFMLADMATKIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  K  S +AA A       K +C   A AV  +A++ +GG GY  +  +
Sbjct: 304 ALYLAAARLRDAGKPFSRQAAMA-------KLFCTDAAMAVTTDAVQILGGYGYTADFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    I+ G+
Sbjct: 357 ERLMREAKVLQIVEGT 372


>gi|170732135|ref|YP_001764082.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169815377|gb|ACA89960.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 395

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               L+ +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|332978732|gb|EGK15426.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 383

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 35/294 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    K W PK+ + EY              +G + +TE   G+D+ AI +   K  D  
Sbjct: 107 TEEQRKAWIPKLATGEY--------------VGAIAMTEPTTGSDLQAIKTYAVKDGDD- 151

Query: 226 YCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           Y ++G K F+++      I+LA    + +G  G  L+  ++E     G    R   K G 
Sbjct: 152 YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLI--VVETDGLEGFERGRNLKKTGL 209

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            +  T EL FSN       LLG +    G ++ M+ L    L  A+     ++++L   +
Sbjct: 210 SAQDTSELFFSNVRVPQKNLLGSVE-GLGFIQMMQELPQERLIIALTGCGAIKLALELTL 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y ++R   G  +      +  +A++  D  A  AL      +  E K  + +A+     
Sbjct: 269 DYVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVEAMIEGKLTAPQAS----- 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             + KYW  +    VI E ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 324 --LIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADARVQKIYGGTNEIM 375


>gi|54294833|ref|YP_127248.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens]
 gi|53754665|emb|CAH16150.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens]
          Length = 375

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 36/281 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P+I S E                 L LTE   G+D+  + +Q     D        K+
Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++D F++LA  +G++   LV +       +GL    + N +G RSN   E+ F N
Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
                  LLG + +    +    I   LD    + +   V L +     A+ Y ++R   
Sbjct: 210 CRIPKTNLLGSIGIGFNCI----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ IA++ + + AA  L F       E + +   A  A  +  I KY   
Sbjct: 266 DRRLDEHQLIQKMIAEMVVQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           KM   V   A++  G +G+ +   + R+YR++    I+ G+
Sbjct: 320 KMVVFVSNHALQIFGAAGFEDTYPVERYYRDAKVMEIIEGT 360


>gi|331009693|gb|EGH89749.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 64/352 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 245 MLAQVEGRVG------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++    G       F+VP+ L  +DGS    N +    L +K+G +   +  L F +
Sbjct: 212 VLAKLPDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGD 271

Query: 294 T---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                G+L+G     L+     + + +I + L + ++  SG   SL     YAR R    
Sbjct: 272 NGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--PQ 325

Query: 347 GILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           G L D       PV             +++A  + A D+    +  F    + +   +R 
Sbjct: 326 GRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDARK 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+ 
Sbjct: 386 HAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTH 445

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
               LD+L                L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 446 GIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|330906226|ref|XP_003295397.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1]
 gi|311333343|gb|EFQ96502.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1]
          Length = 437

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 47/307 (15%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           ++ K+W PK+               T+      L+E   G+D  A+ ++  +  +G Y +
Sbjct: 159 KLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDNG-YKI 203

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           SG K W  +S  ++ FI+ A ++       +  F+V    E G+P G    + + K+G +
Sbjct: 204 SGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIV----EKGTP-GFSIAKKEKKLGIK 258

Query: 283 SNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           +++T       VE+   N  G        + G + + +I I        ++G+ +   E 
Sbjct: 259 ASSTCVITFDDVEIPRDNLLGKEFEGYKYAIGLLNEGRIGI-----AAQMTGLALGAWEN 313

Query: 335 AIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  YA       G LI +   M+  +A    +I AA AL +  A   +  +    +AA A
Sbjct: 314 AASYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARKKEAGEDFIMDAAMA 373

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++MA        ++A  V  +A+E +GG G++ E    +++R+S   +I  G+ N  +  
Sbjct: 374 KLMA-------SQVAGKVSGQAIEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTT 426

Query: 454 VLNLLEK 460
           +  LL+K
Sbjct: 427 IGKLLQK 433


>gi|154484667|ref|ZP_02027115.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC
           27560]
 gi|149734515|gb|EDM50432.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC
           27560]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 49/296 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI------SDGIYCLSGHKWFLSS-PMSDA 242
           P+ K       GLTE   GTD     +QGQ+       +   + L+G K F+++   +D 
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD-----AQGQQTKAVFDEATNEWVLNGSKCFITNGKYADV 167

Query: 243 FIMLA---QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS----- 292
           +I++A   +VE  GR+   +   ++E G+P G  +   + K+G R +AT EL F      
Sbjct: 168 YIVIAVTGKVEKRGRMMKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFEDCRIP 226

Query: 293 --NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
             N  G      N++         +  LD   + ++   + LAE      I Y + R   
Sbjct: 227 AENLLGKKGKGFNIA---------MHTLDGGRIGIAAQALGLAEGALETTIEYVKERKQF 277

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +      +  +AD+A  + AA  L ++ A +    K+ S EAA A++ A        
Sbjct: 278 GRSIGQFQNTQFQLADMATKVEAAKMLVYKAAMAKATQKTYSFEAAQAKLCA-------A 330

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLE 459
           ++A  V  +A++  GG GYI E  + R  R++    I  G+     MV+   NLL+
Sbjct: 331 EVAMEVTTKAVQLHGGYGYIREYDVERMMRDAKITEIYEGTSEVQRMVISA-NLLK 385


>gi|58584002|ref|YP_203018.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625780|ref|YP_453152.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188574667|ref|YP_001911596.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428596|gb|AAW77633.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369720|dbj|BAE70878.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519119|gb|ACD57064.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 387

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 43/311 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++  +     D  
Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  + P +D  ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKL-DKLGMRG 211

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL FS       N  G L G + V    ++  ++++      +  + M V+L    
Sbjct: 212 SNTCELVFSDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALP--- 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  + +  +M+  +AD+ + + A  A  + +A + D   +  ++AA A + 
Sbjct: 269 -YVHERKQFGEPIGNFQLMQAKLADMYVGLNACRAYVYAVARACDAGCTTRQDAAGAILY 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A     W       +  +A++ +GG+GYI +    R +R++    I  G+G + +  +L 
Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377

Query: 457 LLEKGTNLFEQ 467
               G  LFE+
Sbjct: 378 ---IGRELFER 385


>gi|323485654|ref|ZP_08090992.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum
           WAL-14163]
 gi|323401004|gb|EGA93364.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum
           WAL-14163]
          Length = 638

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +       GLTE   G+D A  T     +    Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLARGEKIGAFGLTEPNAGSD-AGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A       K +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHVPYGMESAMA-------KQYASDIALEVTNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|313901750|ref|ZP_07835177.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467986|gb|EFR63473.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 379

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 42/324 (12%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S ++T A+ V+L  TP         +F S E      AP  +       GLTE   G++ 
Sbjct: 82  STALTVAAHVSLGCTPLY-------LFGSEELKARWLAPALRGEKIAAFGLTEPEAGSNT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGC--FLVPRLLEDG 265
           AAI ++ ++  D  + + G K F+++     F+++A V     GR G    LVPR     
Sbjct: 135 AAIRTRARQEGD-RWVIEGTKIFITNGSHADFVVVAAVTDPEAGRDGISNILVPR----- 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  ++ T EL F         L+G+           + L  LD   
Sbjct: 189 EAPGWRAVRRYEKLGLHASDTAELVFDGCRVPLDHLVGERGKG-----HQQFLQTLDGGR 243

Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +  + V +A+A     + YAR R   G  +     ++  +AD+A  + AA  L +R A
Sbjct: 244 IGIGALSVGIAQACLDAALEYARHRRQFGRPISKFQAIQFKLADMATQLEAARWLVYRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +    EAA A++ A        ++A     EA++  GG+GY  +  + R+ R+ 
Sbjct: 304 WLRDRGRPYRREAAMAKLFA-------SELAVRAALEAIQIHGGAGYTRDFPVERYLRD- 355

Query: 438 PANSILLGSGNAMVLDVLNLLEKG 461
            A  + +G G + +  ++   E G
Sbjct: 356 -AKLMEIGEGTSEIQRLVIARELG 378


>gi|262196962|ref|YP_003268171.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080309|gb|ACY16278.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
             L+E   G+D AA  +   +  D         W  + P++D  ++ A  +   G     
Sbjct: 123 FALSEPEAGSDAAAQRTTAVRDGDEWVIQGTKNWITNGPVADTMVLFAMTDKEQGHRGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE-------LEFSNTFGFLLGDLNVSTG 307
            F+VP         G+      +K+G R + + +       L  S   G + G   V+  
Sbjct: 183 SFIVPM-----DTAGVRCGEPDDKLGIRGSKSSQVFLDDARLPASALLGEVGGGFKVAMS 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  ++   R +L +A+ Y+  R   G  +     +   +AD+A ++ 
Sbjct: 238 TLDGGRIGI----AGQALGIARAALEDALDYSLNRKTMGKPIAKHQAISFKLADMATELD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+ R A   D  +   + AA A       K +   +A     EA++  GG+GY+ E
Sbjct: 294 AARLLTLRAAYLKDSGQPYGKAAAMA-------KLYASDVANRAAREAIQIFGGNGYVTE 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + RH+R++    I  G+     L + N L K
Sbjct: 347 YPVERHFRDAKITEIYEGTSEIQRLVIANHLFK 379


>gi|167537125|ref|XP_001750232.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771222|gb|EDQ84891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 395

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGRVGCF 256
           +G+TE   G+D+  I++   K  D  + ++G K F+S+  M D  I++A+  +E +    
Sbjct: 139 IGMTEPGAGSDLQGISTTAVKDGDH-WVINGSKVFISNGQMCDYVIVVAKTDLEAKRAAH 197

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
            +   L D    G       +K+G ++  T EL F +       +LG++N         K
Sbjct: 198 GLSLFLVDAGTAGFTKGANLDKMGLKAQDTSELFFDDCRVPESAILGEVN---------K 248

Query: 314 ILIYLDSAI----MSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364
              YL S +    + +  M  + AEA++     Y   R   GG L +   ++  +A++  
Sbjct: 249 GFYYLMSELPQERLLLGVMATAHAEAMYEWTRAYINDRKAFGGTLANLQTVRHTMAELKT 308

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IA A A +       D+      E    + MA ++KYWC ++   V    ++  GG GY
Sbjct: 309 SIAVARAFT-------DQCIQLHAEGRLTQEMASMSKYWCTELEGKVADVCVQLHGGWGY 361

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I+R + ++    I  G+   M
Sbjct: 362 MSEYKISRAFTDARVQRIYGGANEIM 387


>gi|126640210|ref|YP_001083194.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 333

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 69  PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGD-YYILNGAKQFITSGNNAGVIIVFAV 127

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 128 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 182

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 183 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 238

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 239 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 291

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 292 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 323


>gi|332993525|gb|AEF03580.1| isovaleryl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 389

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + QK  D  Y L+G+K W  + P +  F++ A+ + + G    
Sbjct: 130 LAMSEPNAGSDVVSMKLRAQKRGDK-YILNGNKMWITNGPDAHTFVIYAKTDPQAGPKGI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R      P     Q+L +K+G RS+ T EL F +     +   N+     E ++
Sbjct: 189 TAFIVERDF----PGFTRAQKL-DKLGMRSSNTCELVFQDC---EVPAANILGKEGEGVR 240

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +SG     M+  +   + Y   R   G  +    +++  +AD+   + 
Sbjct: 241 VLMSGLDYERLVLSGGPLGIMQACMDVVVPYIHDREQFGQSIGQFQLVQGKVADMYTQMN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A S D   +  ++AA A +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AARAYVYTVAKSCDRGDTTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGS 446
            S  R  R++    I  G+
Sbjct: 354 YSTGRLLRDAKLYEIGAGT 372


>gi|328952281|ref|YP_004369615.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109]
 gi|328452605|gb|AEB08434.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109]
          Length = 385

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        LTE + G+D  AI +   +  D  Y L+G K W  ++  +  + ++A 
Sbjct: 112 PLAKGDHLAAFALTESQAGSDAGAIQTIAVRDGDS-YILNGTKQWITNAGEAGIYTVIAL 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FG 296
            +   G       + +    G+ + + + K+G R++ T E+ F N             FG
Sbjct: 171 SDRSKGARGASAFIVEADDPGISFGKKEQKMGIRASVTREIVFQNCRIPANRLIAKEGFG 230

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--EAIHYARRRHVSGGILIDQPV 354
           F++            +K L +    + +++      A  EA+ +AR R   G  +I    
Sbjct: 231 FVIA-----------LKTLDFSRPGVGALALGLAQAALEEAVIFARERQQFGHPIISFQA 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++  +A++A  + AA AL + +A + D + K  S+E+A A++       +   MA  V  
Sbjct: 280 VQHMLANMATQLEAARALVYAVARAIDHDPKEFSKESAMAKL-------FPTDMAMQVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +A++ +GG GY+ E  + +  R++    I  G+ N ++ +V+ 
Sbjct: 333 DAVQILGGHGYMREYPVEKMMRDAKILQIFEGT-NQILRNVIG 374


>gi|293611087|ref|ZP_06693386.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826739|gb|EFF85105.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 593

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/404 (21%), Positives = 164/404 (40%), Gaps = 53/404 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIADIALDI 366
              I  +     +   A  YA    + R  +G    ++P         ++R + ++  + 
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANN 357

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420
             + A +  +    D  K  ++ AA  +      ++ PI K +    A     +A    G
Sbjct: 358 EVSRAFAVYVGQQLDITKFSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSS 479
           G GYI E  + +  R+     I  G+      D++     K    F   + T  +D  + 
Sbjct: 418 GHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAND 477

Query: 480 GKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
               +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 478 LDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521


>gi|320354114|ref|YP_004195453.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
 gi|320122616|gb|ADW18162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 41/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-- 255
            GLTE   G+D + I +    + DG  + L+G K W  +   S  + ++A  +   G   
Sbjct: 122 FGLTEANAGSDASGIRTTA--VLDGDEWVLNGTKQWITNGGESQIYTIVALTDPNKGARG 179

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------- 304
              F+V    EDG P G  Y + ++K+G R++AT EL        +L D  +        
Sbjct: 180 ASIFVV----EDGDP-GFSYGKKEDKMGIRASATREL--------ILKDCRIPKDRLVGK 226

Query: 305 -STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             TG +  MK L      I S  V   + +L EA+ YA++R      +I    ++  +AD
Sbjct: 227 RGTGFITVMKTLDMSRPGIASLGVGLAQAALDEAVTYAKQRVQFAKPIISFQAVQHILAD 286

Query: 362 IALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +A+ + AA +L +  A   D+  K  S+       ++ + K +   MA  V  +A++ +G
Sbjct: 287 MAIQLEAARSLVYAAAKHIDKHPKDMSK-------VSSMCKVFATDMAMKVTTDAVQVLG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY++E  + +  R++    I  G+
Sbjct: 340 GYGYMKEYPVEKMMRDAKILQIYEGT 365


>gi|300711203|ref|YP_003737017.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299124886|gb|ADJ15225.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 372

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 26/256 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCF 256
             L+E   G++ A ++++ ++  DG  Y + G K W  +   +   I+ A+  E  +  F
Sbjct: 120 FALSEPEAGSNPAEMSTRAER--DGEEYVIDGKKQWITNGSRAGVVILFAKTGENEITQF 177

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDM 312
           LVP        +GL   + + K+G R++ T  L F    G  + + N  T    G    +
Sbjct: 178 LVP-----ADSDGLEVGKKEEKLGLRASDTTALLFD---GVRVPEENRLTEEGRGLSAAL 229

Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            IL    +  A  SV   + ++ +A+ YA  R   GG + +   ++  +AD+   + AA 
Sbjct: 230 SILTGGRIGIASQSVGLAQAAMDDALAYATEREQFGGPISEIQTIRHKLADMETKLRAAR 289

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+        EA  R +     R+ A I KY+  + A  +  EA++  GG+GY  +  +
Sbjct: 290 LLTR-------EAARREDAGEDPRLDASIAKYFASEAAMEITNEAVQIHGGAGYTTDFDV 342

Query: 431 ARHYRESPANSILLGS 446
            R+YR++   +I  G+
Sbjct: 343 ERYYRDARITTIYEGT 358


>gi|256372298|ref|YP_003110122.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008882|gb|ACU54449.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 404

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 22/281 (7%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   R Y P   +   + S      L+E   G+D+A++T++  +  D  Y LSG K 
Sbjct: 120 WGSEDLKRRYLPRVASGEAQASYC----LSEPDAGSDVASMTTRAVRDGDS-YVLSGTKA 174

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------ 286
           W  ++ +SD + + A+ +   G   +   + + +  G+   +L++K+G R + T      
Sbjct: 175 WITNAGISDTYTVFAKTDPSAGHRGISAFVVE-ADWGVQVAKLEHKLGVRGSPTGQIVLD 233

Query: 287 -VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            V +  +N  G       ++ G ++  + +I       +V   + +L  A+ Y + R   
Sbjct: 234 EVRVPVANRIGEEGQGFYIAMGTLDRSRPMI----GAQAVGIAQGALDAAVAYGKERRQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D   ++  IAD+A  I AA  L +R     D  +  +E     R+ A + K +  
Sbjct: 290 GRPITDNQGIQFTIADLATQIEAARGLVYRACARIDADEPGTE---LTRLGA-MAKLFAS 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             A  V  +A++ +GG GY  +  + R +R++    I  G+
Sbjct: 346 DTAMRVTTDALQLLGGYGYTMDFPLERMFRDAKITQIYEGT 386


>gi|169632134|ref|YP_001705870.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169150926|emb|CAO99533.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 375

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARFKEVGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|117928415|ref|YP_872966.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648878|gb|ABK52980.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 391

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 27/272 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           L+E   G+D AA+ +Q +  + G Y LSG K W   S  +D + ++A+     +  + CF
Sbjct: 121 LSEPHAGSDAAALRTQAEPTAAG-YRLSGTKAWITHSGHADFYTVMARTSPDRDHGISCF 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LV          GL     + K+G R++ T +L  ++    ++          E ++I L
Sbjct: 180 LV-----SADAPGLQAGVPERKMGLRASPTAQLHLADV---VVEPSRRIGAEGEGLRIAL 231

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++     LA+A     + YA +RH  G  + +   +   +A++   +AAA 
Sbjct: 232 AALDVGRLGIAACATGLAQAALDAAVDYAAQRHQFGRPIREFQGVAFLLAEMTAAVAAAR 291

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A     A S D  +  + +AA A+++       C   A  V  +A++  GG+GY+E+  +
Sbjct: 292 ATYLAAARSLDAGRVVTRDAAIAKLI-------CSDTAMRVTTDAIQIFGGAGYVEDYPV 344

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            R++RE+ A  I+ G+     L +   L + T
Sbjct: 345 ERYFREAKALQIVEGTNQIQRLVIARTLGRDT 376


>gi|71733383|ref|YP_272797.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71553936|gb|AAZ33147.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 670

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 52/330 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  +  
Sbjct: 222 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 281

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 282 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 340

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 341 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 394

Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            G L D       PV       ++R +      +  A  L    +  FD+ ++   E A 
Sbjct: 395 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 454

Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 455 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 514

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474
                LD+L   L + G    +QL   + +
Sbjct: 515 HGIQSLDLLGRKLAQNGGTGLKQLLRLISE 544


>gi|84498103|ref|ZP_00996900.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84381603|gb|EAP97486.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 392

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 30/288 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHK-WFLSSPMSDAFIM 245
           P+     +   GL+E+  G+D A++  + +      D  + L+G K W  ++ +SD + +
Sbjct: 119 PLAAGETSFSYGLSEREAGSDTASMKCRAKLDKSAGDDSWVLNGQKSWITNAGVSDYYTV 178

Query: 246 LAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           LA  +        +  F+V +     S  G  +   + K+G + + T EL F N    + 
Sbjct: 179 LAVTDPDGTRGNNISAFVVEK-----SDEGFTFGEKERKLGIKGSPTRELIFDNVR--IP 231

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           GD  +   P E +KI L  LD   +++    V +A+     A+ Y + R   G  + +  
Sbjct: 232 GD-RIIGAPGEGLKIALRTLDHTRVTIGAQAVGIAQGALDHALAYVKERKQFGKNIAEFQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A+++ AA  + +  A     AKS   +A  +       K +   +A  V  
Sbjct: 291 GIQFMLADMAMELEAARQMVYVAA-----AKSERGDADLS-FFGAAAKCFASDVAMKVTT 344

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A++ +GG+GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 345 DAVQLLGGAGYTRDFPLERMMRDAKITQIYEGTNQVQRIVMARQLLKG 392


>gi|107021888|ref|YP_620215.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116688836|ref|YP_834459.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892077|gb|ABF75242.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116646925|gb|ABK07566.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 395

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               L+ +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|110835600|ref|YP_694459.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648711|emb|CAL18187.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 604

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 44/306 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ + +    + LTE + GTD+  + ++     DG Y +SG K F+SS   D       I
Sbjct: 153 PLTEGTWGGTMCLTEPQCGTDLGQVKTKADPQQDGSYKISGTKIFISSGDHDLTENIIHI 212

Query: 245 MLAQV----EGRVGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +LA++    +G  G   F+VP+ L    G  NG+    L+ K+G +++AT  + F    G
Sbjct: 213 VLARLPDAPKGTKGISLFIVPKYLPGKIGEHNGVSCGSLEKKMGIKASATCVINFDEATG 272

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH----VSG- 346
           FL+G  +   G +E M    +++SA +  +   V+ AE     A+ YA+ R     +SG 
Sbjct: 273 FLIGPEH---GGLECM--FTFMNSARIGTAMQGVAHAERSYQGALPYAKERKSMRALSGK 327

Query: 347 -------------GILIDQPVMKRAIAD--IALDIAAATALSFRLANSF-DEAKSRSEEA 390
                        G +    + ++AIA+   A+   AA      +A    D+ +      
Sbjct: 328 KEPDAIADSLIHHGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMEKYDHWD 387

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +    + PI K +  +       E M+  GG GYI+E  + +  R++  +++  G+    
Sbjct: 388 SELGFLTPILKGFLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGTTGIQ 447

Query: 451 VLDVLN 456
            LD+L 
Sbjct: 448 ALDLLG 453


>gi|289663077|ref|ZP_06484658.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 382

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +
Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFFINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + + K+G R++AT E+EF++   ++     V     E  K  +  
Sbjct: 183 TAFMVDTERAGFHRGKTEPKLGIRASATCEIEFAD---YVAQSDEVLGVEGEGFKTAMSV 239

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L
Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R
Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 353 YFRDAKITEIYEGT 366


>gi|255535005|ref|YP_003095376.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341201|gb|ACU07314.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 393

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 26/272 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLV 258
           GLTE   G+D   + +   K  D  + ++G K F++  +S    ++    G  G      
Sbjct: 137 GLTEHNTGSDSGGMNTTAVKDGDD-WIINGAKNFITHAISGDIAVVMTRTGDKGAKNNST 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKI 314
             +LE G   G    R +NK+G R++ T EL F N     + D N    V +G  + MKI
Sbjct: 196 AFVLEKGMA-GFSSGRKENKLGMRASETAELIFDN---IRVPDANRLGEVGSGFKQAMKI 251

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   +S++ + + +A      A+ Y+  RH  G  +     +   +AD+A +I A+
Sbjct: 252 L---DGGRISIAALSLGIARGAYKAALKYSLERHQFGKPINQFQAINFMLADMATEIDAS 308

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  R +N  +  K  ++E A A++ A      C ++A      A++  GG GY ++  
Sbjct: 309 ELLIQRASNLKNAKKPMTKEGAMAKLYASEA---CVRIAN----NAVQIFGGYGYTKDFP 361

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             ++YR++   +I  G+     L +   + KG
Sbjct: 362 AEKYYRDAKLCTIGEGTSEIQKLVIGREISKG 393


>gi|21231868|ref|NP_637785.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768004|ref|YP_242766.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21113589|gb|AAM41709.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66573336|gb|AAY48746.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 597

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGL--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRAISGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++ 
Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454


>gi|301167939|emb|CBW27525.1| isovaleryl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 382

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D   I ++ +K  D  Y L+G K W  ++  +D   +  +  G+    L 
Sbjct: 122 MGMSEPEYGSDAVGIQTKAEK-KDDHYLLNGTKMWITNAEYADVAYVYTRT-GKERKNLS 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             ++E G+  G    +  +K+G R++ T EL F N       L+G+   S        ++
Sbjct: 180 TFIVEKGA-EGFSIGKPIHKMGMRASPTGELVFDNCKVPHSALVGNEGDSI-----YHMM 233

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+   ++++G+ + +A+A     + YA  R   G  L +  ++++ IA++A +     
Sbjct: 234 KNLELERITIAGISLGIAQACVDQCVKYAGEREQFGKSLGNYQMIQKMIAEMATETEMMR 293

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              + +A  +D+ K     AA  ++  P       KMA  +  +A++  GG GY  E  +
Sbjct: 294 RFLYTVAKEYDDGKKGPMVAAQVKLQIP-------KMATKIALDAIQLHGGYGYSREFPV 346

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R  R++  N I  G+   M++
Sbjct: 347 ERMMRDNKLNEIGAGTNEVMIM 368


>gi|183221848|ref|YP_001839844.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911919|ref|YP_001963474.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776595|gb|ABZ94896.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780270|gb|ABZ98568.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 584

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 57/293 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-- 257
           + LTE   G+D+ ++ +   K  DG Y L+G K F+S                 GC L  
Sbjct: 186 MSLTEPDFGSDLNSVRTVAIKQEDGSYRLTGTKRFISQ----------------GCGLGD 229

Query: 258 VPRLL----EDGSPNG--------------LCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
            P LL      G P+G              +    ++ K+G   + T E+ + N++G +L
Sbjct: 230 YPALLLTLARTGKPDGGARGLSVFLVKSSDITVAGIEKKMGLHGSPTCEIVYENSYGEIL 289

Query: 300 GDLNVS-TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           G+  +  T     M   + L SA     G   +  E++ YA  R+  G  + + P +   
Sbjct: 290 GEEGLGLTRYTAGMTNFMRLVSASGGCGGGAAAYFESLKYANERNQFGKPIFEIPAVFEM 349

Query: 359 IADIALDIAAATALSFRLANSFDEAK----------------SRSEEAAY----ARIMAP 398
           +  I  +  A   L+   A   D  +                 + E+  Y    A I+ P
Sbjct: 350 VHKIKRETNAMRLLTLETARVIDMYQHHQIRLEKQGLPDRDIRKDEKVKYWSTLASILTP 409

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           I KY+  +      + A++  GG+GY E+  I+R +R+S  N+I  G+    V
Sbjct: 410 IAKYYSSEEGHKCTSIAVQVFGGAGYTEDYDISRMFRDSRINTIYEGTSQIHV 462


>gi|167624357|ref|YP_001674651.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354379|gb|ABZ76992.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 596

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 42/324 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE   GTD+A + ++    S+G + ++G K F+SS   D       ++LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP++L  +DGS    N L    L++K+G   N+T  + F    G L+G+ +
Sbjct: 222 GVKGISLFVVPKVLINDDGSLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350
                +  M     L   +  +    ++   A+ YA+ R               +  IL+
Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRALSGVKQAAQAADSILV 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404
              V +  ++  A +     AL  + A   DEA+  S        +  A +  PI K + 
Sbjct: 342 HGDVRRMLLSQKAFN-EGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFV 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
                    +A +  GG GYI E  + +  R+S    I  G+     LD++    L +K 
Sbjct: 401 TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKA 460

Query: 462 TNL---FEQLFSTLEQDLGSSGKK 482
             L    EQ+   +++++G+   K
Sbjct: 461 QTLQLWSEQVKLLIQRNMGNDAMK 484


>gi|171685065|ref|XP_001907474.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942493|emb|CAP68145.1| unnamed protein product [Podospora anserina S mat+]
          Length = 461

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++ ++ +++ DG Y L+G K W  + P +D  I+ A+     G   +
Sbjct: 196 LAMSESGSGSDVVSMRTRAKEV-DGGYVLNGSKMWITNGPDADIVIVYAKTVPDGGSKGI 254

Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
              ++E     G  C ++L +K+G R + T EL F N F     +LG +N   G V  + 
Sbjct: 255 TAFIVETDKAEGFECLRKL-DKMGMRGSNTGELVFENVFVPKENVLGKVN---GGVRVLM 310

Query: 314 ILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + L+  ++S      M+ +L  A+ YA  R   G  +     M+  +AD+   + A+ 
Sbjct: 311 EGLDLERLVLSAGPLGLMQAALDVALPYAHGRKQFGTPIAQFQFMQGKLADMYTKLQASR 370

Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A ++  A + DE A  R+++ A A + A      C         +A++ +GG GY EE  
Sbjct: 371 AYTYATAKAVDEQADIRTQDCAGAILYAAERATECA-------LDAIQILGGMGYTEEMP 423

Query: 430 IARHYRESPANSILLGSGNAMV 451
            +R  R++    I  G+G + V
Sbjct: 424 ASRILRDAKLYEI--GAGTSEV 443


>gi|170050078|ref|XP_001859196.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167871659|gb|EDS35042.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 359

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 21/253 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA++++  +  DG + L G K W  S+  + + I+ A V   +    +  
Sbjct: 101 LSEADAGSDVAALSTRAVEDGDG-FVLHGTKAWVTSALEAKSGIIFATVNPELKYKGITA 159

Query: 261 LLED-GSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
            L D     GL   R + K+G R+++T       V++  SN  G + G   ++   ++  
Sbjct: 160 FLVDFEKAQGLTIGRPEEKLGIRASSTCNLILENVKIPKSNLLGTIGGGFRLAMEQLDRA 219

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   + SL EAI YA++R   G  L+  PV++  IA++A+ I ++  L
Sbjct: 220 RIGI----ASQALGIAQASLEEAIAYAKQRIAFGEPLLKLPVVRTRIAEMAVRIESSRLL 275

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D  +  ++  + A+ +A  T  +             + +GG GY+++    R
Sbjct: 276 VRKAATEIDRQRPATKSCSMAKWVAGETATFAAH-------NCQQIMGGMGYVKDLPAER 328

Query: 433 HYRESPANSILLG 445
            YR++    I  G
Sbjct: 329 LYRDARITEIYGG 341


>gi|221134901|ref|ZP_03561204.1| probable acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999]
          Length = 586

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 41/293 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE   GTD++ ++++    +DG Y ++G+K F+++   D       ++LA+      
Sbjct: 162 MNLTEPHAGTDLSLLSTKAVPQNDGSYAITGNKIFITAGDHDWSENIIHLVLARLPDAPK 221

Query: 249 -VEGRVGCFLVPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+G +  FLVP++ + D    GSPN +    ++ K+G +++ T  + +    GFL+G+ 
Sbjct: 222 GVKG-ISLFLVPKINVNDDGTLGSPNAVSVGSIEKKMGLKASPTCVMNYDEAQGFLIGEE 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350
           +     +  M         +  +     S   A+ YA  R  S    GI         +I
Sbjct: 281 HSGLACMFTMMNDARFQVGLQGLGIGEASYQGALEYAVERLQSRAPQGIQAPDKKADPII 340

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEA-AYARIMAPITKY 402
            QP ++R +           ALS   A   D       EAK+ +E   AY   + PI K 
Sbjct: 341 FQPDVRRMLLTQRSLTEGCRALSMLYAKFMDIEKYATGEAKTNAEVVIAY---LTPICKA 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +   MA  V    ++  GG GYI E  + ++ R++    +  G+      D++
Sbjct: 398 FFTDMATEVSNYGIQIYGGHGYIREWGMEQYVRDTRIAQLYEGTNGIQAADLI 450


>gi|328709833|ref|XP_001947176.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 422

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 26/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           L+E   G+D  A+ +  +K  D  Y      W  +S ++  F + A  +   G     CF
Sbjct: 164 LSEPSSGSDAFALKTTAKKDGDHYYINGTKMWISNSDIAGIFYVFANTDPSKGHKGVTCF 223

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V R  E     G    + ++K+G R++ T  L F N     +   N+     E  KI I
Sbjct: 224 IVEREQE-----GFSVAKKEDKLGMRASGTCVLHFDNV---KVHKDNIVGKIGEGYKIAI 275

Query: 317 -YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +L+   + +    V +A+      I Y   R   G  + D   M+  IA    ++  A 
Sbjct: 276 TFLNEGRIGIGAQMVGIAQGCLDHTIPYTLERKQFGSSIFDFQSMQHQIARAVTEVETAR 335

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +  A   D      +EAA A       KY+  ++A  V +  ++ +GG G+  +   
Sbjct: 336 LIVYNTARLVDAGLPFIKEAAMA-------KYYASEVAGKVTSVCIDWMGGVGFTTDYPQ 388

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + YR+     I  G+ N  +  +   ++K
Sbjct: 389 EKFYRDCKVGPIYEGTTNMQLSTIAKFIKK 418


>gi|323691729|ref|ZP_08105989.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323504207|gb|EGB20009.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 638

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +       GLTE   G+D A  T     +    Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLARGEKIGAFGLTEPNAGSD-AGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q ++   +AD+
Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A       K +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHVPYGMESAMA-------KQYASDIALEVTNDALQIFGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   +I  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365


>gi|300727789|ref|ZP_07061171.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14]
 gi|299774942|gb|EFI71552.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14]
          Length = 510

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCF 256
           + + LTE   G+D+  +  +  +  DG + L+G K F+++  SD  ++LA+  EG     
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNGDSDIHLVLARSEEGTHDGR 230

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + D    G+  + +++K+G   + T EL + N    L GD  +  G ++ +  L+
Sbjct: 231 GLSMFIYDKRDGGVDVRHIEHKLGIHGSPTCELTYKNAKAELCGDRKL--GLIKYVMALM 288

Query: 317 ---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  SV   + +  EA+ YA+ R   G  +I  P +   ++ +   + A  +L 
Sbjct: 289 NGARLGIAAQSVGVEQEAYNEALAYAKERQQFGKKIITFPAVYDMLSRMKAKLDAGRSLL 348

Query: 374 FRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEAM 416
           +  A   D  K+              R E   Y+R+     P+ K    + A     +A+
Sbjct: 349 YMTARYVDIYKALEDISRERKLTPEERKEMKLYSRLADAFTPLAKGTNSEYANQNAYDAV 408

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
              GGSG+I E    R  R++   SI  G+    V+  +  +  GT L
Sbjct: 409 SVHGGSGFIMEYKSQRLLRDARIFSIYEGTTQLQVVAAIRYITNGTYL 456


>gi|194366550|ref|YP_002029160.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349354|gb|ACF52477.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 596

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 50/297 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPPGA 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G     
Sbjct: 226 KGISLFVTPKFKVDRDGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354
             P + ++ +   +++A + V    + L+E     A+ Y+R R     +SG    D+P  
Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRSLSGAKFPDKPAD 339

Query: 355 -------MKRAIADIA--------LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
                  ++R +  I         L + AAT +   +A+  D+A  R         + PI
Sbjct: 340 PILVHPDVRRMLLTIKSLVEGSRLLALHAATLID--VAHHADDAAERERADTLVSFLTPI 397

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +K    +        A++C GG GYI E  + +  R++   ++  G+     LD++ 
Sbjct: 398 SKACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454


>gi|111020601|ref|YP_703573.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820131|gb|ABG95415.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 399

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 14/269 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D +A ++      +G Y ++G KWF++   ++D  I+LA VE      + 
Sbjct: 121 VAISEANAGSDFSAASTTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPEHAATIF 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316
             L++  +P G+  + +            E  F N     +G+  V    G   D+    
Sbjct: 181 --LIDVDTP-GVKIKHIPRYTHTFVYEHPEFTFENV---RVGEDAVLGGIGQGHDLTRDW 234

Query: 317 YLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + +  +M    ++     +L  A+ +AR R   G  LI++ +++  IAD  +DI    AL
Sbjct: 235 FTEERLMIGARTIGAAERALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRAL 294

Query: 373 SFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + ++A  FD+A     +        A   K    + +  V   A++  GG GYI +  + 
Sbjct: 295 THQVAWEFDQADPHDADLRKTLHAKAATVKLAASEASNRVADRAVQIFGGRGYIRDYPVE 354

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R +RE   + I  G+     L + N   K
Sbjct: 355 RLWRELRVDRIWEGTSEIQRLVIANEANK 383


>gi|261251347|ref|ZP_05943921.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891]
 gi|260938220|gb|EEX94208.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891]
          Length = 389

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 30/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +     D  Y L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 130 LAMSEPNAGSDVVSMQLKATLNGD-YYLLTGSKMWITNGPDADVIVVYAKTEPDKGSHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +   +G  + +  +K+G R + T EL F N       +LG+LN      + +K+L
Sbjct: 189 TAFIVEKKFSGFSHAQKLDKLGMRGSNTCELVFDNCPVPKENILGELN------QGVKVL 242

Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   ++  +G    M+  L   I Y   R   G  + +  +++  +AD+     AA
Sbjct: 243 MSGLDYERVVLAAGPLGIMQACLDIVIPYIHDRKQFGRSIGEFQLVQAKVADMYTRTNAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++AA A +       +C ++A  +  +A++ +GG+GYI E  
Sbjct: 303 RAYLYTVAKACDNKQTTRKDAAGAIL-------YCAELATQLALDAIQLLGGNGYINEFP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 356 AGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|241763455|ref|ZP_04761509.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367397|gb|EER61718.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 598

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 62/359 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K + PK+ S E+  T             + LTE   GTD+  + ++ +  +DG Y
Sbjct: 145 TEEQKKIYLPKLTSGEWTGT-------------MCLTEPHCGTDLGLLRTKAEPQADGTY 191

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGL 270
            ++G K F+S+   D       ++LA++ +  VG      F+VP+   +     G  N +
Sbjct: 192 KITGAKIFISAGEHDMTSNIVHLVLARLPDAPVGSKGISLFVVPKFKVNADGSLGERNAI 251

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               L++K+G   NAT ++      G ++G  N          + + +++A + V    +
Sbjct: 252 YCGGLEHKMGIHGNATAQIVIDGATGTMVGQPNKGLA-----AMFVMMNAARLGVGNQSL 306

Query: 331 SLAE-----AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIA 367
            L E     A+ YA+ R     +SG    D+P              +  +A A+    + 
Sbjct: 307 GLTEVAYQNALAYAKDRIQMRSLSGTKAKDKPADPIIVHPDVRKMLLTAKAYAEGGRALQ 366

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              AL      S  + K R E      ++ PI K +             +  GG GYI+E
Sbjct: 367 CFCALLLDKELSHPDEKVRKESGEMLALLTPIVKAFITDNGYEAATMCQQVFGGHGYIKE 426

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDLGSSGK 481
             + ++ R++  N I  G+     LD+L    L   G  L  F +L   L ++ G + K
Sbjct: 427 WGMEQYVRDARINMIYEGTNTIQSLDLLGRKILGNNGATLKKFGKLVGQLVEEEGVNEK 485


>gi|219123841|ref|XP_002182225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406186|gb|EEC46126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 437

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSS------PMSDAFIMLA 247
           +V  G+ ++E   GTD+  + +    I   G + L+G K ++++         D F++ A
Sbjct: 161 TVVGGMCMSEPNAGTDVLGMKTNATAIEGGGGWKLNGTKMWITNGTLDGRTTGDIFLVYA 220

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +  G     L   ++E   P     Q++ +K+G R++ T EL F +       ++G++N 
Sbjct: 221 RT-GPAKTDLTQFVVEKNMPGFSLGQKIVDKLGMRASMTAELVFEDVILSHDHVVGEVNE 279

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIA 363
           +T  +     +  +  A M++   R S+ E   YA  R   G   L +   ++R IA+  
Sbjct: 280 ATLCMMRNLEIERIGLAAMALGIARRSIDEMKRYALERQAFGARNLFEFGQIQRLIAESY 339

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  A     + +ANS D  K+ +       + A  TK +C KM+  V   A++ +GG G
Sbjct: 340 AEYMAGRCYVYGVANSLDLNKAGNG------LDADGTKLYCAKMSKEVADRAIQVMGGYG 393

Query: 424 YIEERSIARHYRES 437
           Y+ E  + R +R++
Sbjct: 394 YVGEYKVERLWRDA 407


>gi|192290931|ref|YP_001991536.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284680|gb|ACF01061.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 375

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + +  ++  D  Y ++G K F++S  +   I+L  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R+++K+G  S+ T +L F++    +  DL +     E +
Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAA  +    A+  +       EA+ A++ A  T       A AV + A++ +GG GY++
Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLFASET-------AEAVCSSAIQTLGGYGYLK 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +  + R YR+     I  G+ +
Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365


>gi|109897274|ref|YP_660529.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109699555|gb|ABG39475.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 385

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 36/269 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ +   K+    Y L+G K F+S +  +D  +++A+  G     +  F
Sbjct: 124 LTEPGSGSDAAALRTSA-KLDGDDYVLNGSKMFISGAGETDVLVVMARTGGEGPKGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGPV 309
           LVP         G+ Y + + K+G  +  T  + F N   +   LLGD     + +   +
Sbjct: 183 LVP-----ADAQGITYGKAEEKMGWNAQPTRLITFDNVRVSHINLLGDEGQGFSFAMQGL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I    A  S+   + +L  A  Y + R   G  L     ++  +AD+A ++ AA
Sbjct: 238 DGGRVNI----ATCSIGTAQQALNTATAYMKERTQFGKPLAAFQALQFKLADMATELVAA 293

Query: 370 TAL----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             +    +F+L N   E   RS   A A+  A    +  C        +A++  GG GYI
Sbjct: 294 RQMVRLAAFKLDNKDPE---RSAYCAMAKRFATDIGFEVCN-------QALQIHGGYGYI 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
           +E  + RH R+   + IL G+   M + V
Sbjct: 344 QEYPLERHVRDVRVHQILEGTNEIMRMIV 372


>gi|295696335|ref|YP_003589573.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411937|gb|ADG06429.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 381

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLV 258
           LG+TE   G+D+A++ +  ++  D  Y L+G K F++   S  ++ + A+ +   G   V
Sbjct: 124 LGVTEPDAGSDVASMRTVARREGDH-YVLTGSKMFITGGASADYVCVAAKTDPSAGHRGV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLNV 304
              + +    G    R   K+G R++ T EL              E +  F +++ +   
Sbjct: 183 SMFIVEAGMPGFSVGRTLRKLGWRASDTAELILDGVQVPAENLVGEENQGFRYIMINFQW 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   +I++    A+ SV+    +L +A+ Y+R R   G  +     ++  + D+A+
Sbjct: 243 E-------RIML----ALSSVAAAEKALEDALRYSRERTQFGRPIGTFQALRHKMVDMAV 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI  A +L++R    +    +R E+   A  MA   K +  +M   V   A++  GG+GY
Sbjct: 292 DIEKARSLTYRALYLY----ARGEDVTVAASMA---KAYAGEMVNRVTDAALQIHGGNGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
           + E  + R++R++   SI  G G   ++
Sbjct: 345 MMEYPVQRYWRDARIMSI--GGGTTQIM 370


>gi|313500924|gb|ADR62290.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 42/295 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248
           + LTE   G+ +A I ++ +   DG Y L G+K F+S     +S+  +  +LA+      
Sbjct: 162 MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPP 221

Query: 249 -VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+  +  DGS    N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ------- 352
           G  +     +  M     +   + +V     S   ++ YAR+R    G L D        
Sbjct: 281 GQPHQGLACMFQMMNEARIGVGMGAVMLGYASYLYSLEYARQR--PQGRLPDSKDPLSPA 338

Query: 353 -PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            P++           ++A  + A D+    A  F    + ++  SR++  A   ++ P+ 
Sbjct: 339 VPIIAHTDVKRMLLTQKAYVEGAFDLGLYAARLFDDTQTANDETSRNQAQALLDLLTPVV 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L
Sbjct: 399 KSWPSTFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 453


>gi|293605739|ref|ZP_06688115.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292815864|gb|EFF74969.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 84  LHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           L    P  ERWD+   +PA     + +      L    WD +    V         +   
Sbjct: 19  LERLAPNAERWDREHHYPADAIQEMAQLGFFGMLVPEEWDGNDSGYV---------SYAV 69

Query: 142 LMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            + ++ AG     ++ S  + VA M   +   D     F R        P+   +   G 
Sbjct: 70  ALEEIAAGSGACSTIMSVHNSVACMPILKFGNDAQKDQFLR--------PLASGAHIGGF 121

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG-- 254
            LTE + G+D +++ ++ ++  +  Y L+G K F++S  S   +++  V     G+ G  
Sbjct: 122 ALTEPQAGSDASSLRTRARRDGED-YILNGAKQFITSGKSGQTVIVFAVTDPDAGKRGIS 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTG 307
            F+VP         G    R+++K+G  ++ T  + F +      + LG       ++  
Sbjct: 181 AFIVPT-----DTPGYQVLRVEDKLGQHASDTCHIAFEDMRIPAAYRLGAEGEGYKIALA 235

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +E  +I I    A  SV   R +   A  YAR R   G  + D   +   +AD+A  I 
Sbjct: 236 NLEGGRIGI----ASQSVGMARAAFECARDYARERQAFGKPIFDHQAVAFRLADMATQIH 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +          A +  E    A + A + K +  +MA  V + A++ +GG GY+++
Sbjct: 292 AARQMVL-------HAAALREAGRPALMEASMAKLFASEMAEKVCSAAIQTLGGYGYLKD 344

Query: 428 RSIARHYRESPANSILLGSGN 448
             + R YR+     I  G+ +
Sbjct: 345 FPVERIYRDVRVCQIYEGTSD 365


>gi|227498693|ref|ZP_03928837.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
 gi|226904149|gb|EEH90067.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
          Length = 377

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 46/276 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D   ++++  K  D  Y L+G K F+++  ++D+F++ A      G     C
Sbjct: 123 LTEPDAGSDAGGVSTKAVKEGDH-YVLNGSKVFITNGGIADSFLVFANTRKTGGIRGLTC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP+    G+P G    R ++K+G R + T EL        +L D+ V     E M++ 
Sbjct: 182 FIVPK----GTP-GFSVGRKEDKMGIRPSNTCEL--------ILEDVVVP----ESMRVG 224

Query: 315 ---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                    +  LDSA   V+ + V +A+     A HYAR R   G  +    +++  +A
Sbjct: 225 REGQGFRIAMQTLDSARPFVASVAVGVAQSALDIAAHYARERRQFGQPISSFQLIQGMVA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ +  A  +  +     D+      EAA       ++K +   +A  V  +A++ +G
Sbjct: 285 DMAMKVHGARLMVQQACWMRDQGLEFGMEAA-------MSKCFASDVAMEVTTDAVQIMG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+++  + +  R++    I  G+     L + N
Sbjct: 338 GYGYMKDYPMEKKMRDAKILQIYEGTNQIQRLVIAN 373


>gi|288554424|ref|YP_003426359.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545584|gb|ADC49467.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 20/277 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           PM +       GLTE   G+D A + +    I DG  Y L+G K F+++  ++D +I+ A
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAARMKTTA--IEDGDHYVLNGSKIFITNGGIADIYIVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +           + +    G    + + K+G RS+ T E+ F +     +   N+   
Sbjct: 171 VTDPEARHKGTTAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENMLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  K+ ++ LD     ++   V +A+     A+ YA+ R   G  +  Q  +   +AD
Sbjct: 228 EGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVGYAKERKQFGKPIGAQQGIGFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I A+  L+++ A    E  S  +E+A +++ A  T       A  V  EA++  GG
Sbjct: 288 MATKIEASRLLTYQAAWRESEGVSYGKESAMSKLFAGDT-------AMDVTVEAVQVFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 341 YGYTKDYPVERYMRDAKITQIYEGTNEIQRLVISKML 377


>gi|206973583|ref|ZP_03234501.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|206747739|gb|EDZ59128.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
          Length = 569

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 38/315 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFE 466
           L V  +L K     E
Sbjct: 403 LTVAKMLMKQVEQIE 417


>gi|332300789|ref|YP_004442710.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177852|gb|AEE13542.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
          Length = 576

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +     +D  + L+G K F+++  S+  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSNIHLVLARSEEGTKDA 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G +   T EL F +    L G+  +  G +    ++
Sbjct: 231 RGLSMFIYDAKKGGVTVRRIENKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + +    V ++EA +     YA  RH  G  +   P +   +A I     A  
Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDRFPAVYEMLALIRAKADATR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           A  +  +   D  K+              R E+  Y+R+     PI K    ++A   + 
Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           + ++  GGSGY+++ +  R YR+    +I  G+    V+  +  +  GT      F+ LE
Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461

Query: 474 Q 474
           +
Sbjct: 462 E 462


>gi|229590490|ref|YP_002872609.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229362356|emb|CAY49258.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA----FIM 245
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +      F +
Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGVVIVFAV 169

Query: 246 LAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
              V G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  G
Sbjct: 170 TDPVAGKRGISAFIVP----TDSP-GYTVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  ++ I    A  SV   R +   A  YAR R   G  +I+   + 
Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERESFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  K    EA+ A++ A        +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKPALVEASMAKLFA-------SEMAEKVCSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|221065050|ref|ZP_03541155.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710073|gb|EED65441.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 598

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 166/401 (41%), Gaps = 68/401 (16%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    TP   K +  K+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKIYLGKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLV 258
           D+  + ++ +  +DG Y ++G+K F+S+   D       ++LA++         +  F+V
Sbjct: 175 DLGMLRTKAEPQADGSYKITGNKIFISAGEHDFTSNIVHLVLARLPDAPPGSKGISLFVV 234

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   +     G  N +    L++K+G   NAT ++      G L+G+ N          
Sbjct: 235 PKFKVNADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP---VMKRAIAD 361
           + + +++A + V    + L E     A+ YA+ R     +SG    D+P   ++      
Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349

Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             L  A A A   R  ++F            + K R +      ++ PI K +       
Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465
               + +  GG G+I+E  + +  R++  N I  G+     LD+L    L  +G  L  F
Sbjct: 410 ATTLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            +L + L ++ G + K  ++     I++  E   + +F TE
Sbjct: 470 GKLIAQLVEEEGVNEK--MSEFITPIAVLGEQ--MTKFTTE 506


>gi|115492645|ref|XP_001210950.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114197810|gb|EAU39510.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 439

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 19/279 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T       L+E   G+D  A+ ++ +K +DG Y ++G K W  +S  +  FI+ A 
Sbjct: 168 PQLATGTVGSFCLSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGVFIVFAN 226

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           +    G   +   + +    G    + + K+G R+++T  L F +    ++   N+    
Sbjct: 227 LNPSAGYKGITAFIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKANLLGEE 283

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +  K  I  L+   + ++     LA       A +    R   G ++ +   M+  IA 
Sbjct: 284 GQGYKYAINLLNEGRIGIAAQMTGLALGAWENAASYVWNDRKQFGQLIGNFQGMQHQIAQ 343

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +IAAA AL +  A   +  +   ++AA A++       +  ++A  V + A+E +GG
Sbjct: 344 AYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVASSAVEWMGG 396

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G++ E    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 397 MGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|317470438|ref|ZP_07929826.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316901953|gb|EFV23879.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 44/267 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253
            GLTE   G+D     +  +K  D  Y L+G K F  + P++D  A   L + E +   +
Sbjct: 124 FGLTEPNAGSDAGGCVTVAEKDGD-EYILNGMKCFNTNGPLADYTAVYALTEPEKKAKGL 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF+V +    G+P G    ++++K+G RS    E+        +L ++ V   P E+M 
Sbjct: 183 SCFVVKK----GTP-GFSVGKVEDKMGIRSAQVSEM--------ILENVRV---PAENMI 226

Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
           +         +  LD   + V+   + +AE     A  Y + R   G  L     +   +
Sbjct: 227 VPSGDGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ ++I AA  + ++ A    E +  S  AA A       KY C + A  V  EA++ +
Sbjct: 287 AELEMEIDAAKLMLYKAAADKQEGRRYSIPAAKA-------KYLCTEAAMHVTTEAVQML 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY++   + R  R++    I  G+
Sbjct: 340 GGNGYMKGYHVERMMRDAKITQIYEGT 366


>gi|225024858|ref|ZP_03714050.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC
           23834]
 gi|224942387|gb|EEG23596.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC
           23834]
          Length = 587

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 46/292 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEG--- 251
           + L+E + GTD++ + ++     DG Y +SG K F++     +++  I  +LA++ G   
Sbjct: 161 MNLSEPQAGTDLSQVATKAVPQEDGSYRISGQKTFITWGEHELTENIIHLVLARLPGTTS 220

Query: 252 ---RVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+  +  DGS    NG+    +++K+G  ++ T  ++F    G+L+G   
Sbjct: 221 GIKSLSLFIVPKYKIKPDGSIGERNGVSATAIEHKMGIHASPTCVMQFDEAEGYLIGKAG 280

Query: 304 VSTGPVEDMKILIYLDSAI------MSVSGMRVSLAEAIHYARRRH--VSGG-------I 348
                    + L+Y+ + +      + + G  V+ A         H  + G         
Sbjct: 281 ---------RGLLYMFTMMSHARLGVGIEGHAVAEAAYQQALAYAHERIQGSAPDGTPLT 331

Query: 349 LIDQPVMKRAI----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKY 402
           +I  P + R +    A IA   A     +  L  S    +  +++AA  R+  + PI K 
Sbjct: 332 IIHHPDVARMLLVQKATIAAQRALYLQAAAALDASHQHPEPAAKKAAKGRLDYLIPIVKA 391

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           WC      +   AM+  GG+GYIEE  IA+  R+    +I  G+      D+
Sbjct: 392 WCSDNGTVLANLAMQVFGGAGYIEETGIAQLVRDVRITAIYEGTNGVQAADL 443


>gi|297585455|ref|YP_003701235.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297143912|gb|ADI00670.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 28/270 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VG 254
           GLTE   G+D A + +  ++  D  Y L G K ++++   +D +++ A  +       V 
Sbjct: 124 GLTEPGAGSDAAGMKTTAKRDGDD-YILDGSKIYITNGGEADIYVVFALTDPEKKHKGVT 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V + +E     G    + + K+G RS+ T+E+ F    G  +   N      E  KI
Sbjct: 183 AFIVEKGME-----GFTMGKKERKMGIRSSPTLEIIFD---GVRVPKENRLGEEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A     EA+ YA+ R   G  +  Q  +   +AD+A  + A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDEAVAYAKERKQFGKPIGAQQGIGFKLADMATKVEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L+++ A    E KS  + +A       ++K +    A  V  EA++  GG GY ++ 
Sbjct: 295 SRLLTYQAAWLESEGKSYGKASA-------MSKLFAGDSAMEVTTEAVQVFGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R+ R++    I  G+     L +  +L
Sbjct: 348 PVERYMRDAKITQIYEGTNEIQRLVISKML 377


>gi|50084855|ref|YP_046365.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|15812037|gb|AAC37155.2| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530831|emb|CAG68543.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 43/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y ++G K F+S+   D       I+LA++       
Sbjct: 166 LTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGT 225

Query: 253 --VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   D        N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 226 KGISLFIVPKFNVDEFGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQP 353
              +        + +A+  ++  +++   A+ YAR R       GI         +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASQIAFQGALEYARDRLAMRALSGIQYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407
            ++  +           AL++ LA   D   + K   ++ A   ++A   PI K +  + 
Sbjct: 346 AVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQL 468
           +  T+L +Q 
Sbjct: 466 KNMTDLIDQF 475


>gi|311108082|ref|YP_003980935.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762771|gb|ADP18220.1| acyl-CoA dehydrogenase, N-terminal domain protein 16 [Achromobacter
           xylosoxidans A8]
          Length = 386

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 38/322 (11%)

Query: 149 GHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G + S  +TSA  V + M TP +          REY     AP     +   +G++E   
Sbjct: 76  GEVRSSGLTSAIGVQSTMCTPALAHH-GSDALKREY----LAPTIAGDLVGCIGVSEASA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------CFLVPR 260
           G+D++ I +  ++  D  Y ++G K W  +    D   +L       G        +VP 
Sbjct: 131 GSDVSRIKTWARRDGDD-YIINGSKMWITNGVQGDWICLLCNTSQEGGPHKNKSLIIVPL 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
                SP G+   R  +K+  R++ T EL F       SN  G             ++ +
Sbjct: 190 ----KSP-GVSVSRKLDKLVLRASDTAELFFDDVRVPASNCIGEENMGFIYQMEQFQEER 244

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + +    A  S+  M  ++ E I YA +R V GG ++   V+   +A++  +I A  +L 
Sbjct: 245 MFV----AARSMRSMERAIEETIEYAGQRQVFGGTILSNQVVYHKLAEMQTEIQALRSLL 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R  + + + +  ++        A + KY+  K++  +  E ++  GG G + E  I+R 
Sbjct: 301 YRAIDLYMDGQDIAQ-------FASMAKYYAGKLSMKIPNECLQFWGGQGVMNENWISRA 353

Query: 434 YRESPANSILLGSGNAMVLDVL 455
           YR+    +I  G  N ++L+V+
Sbjct: 354 YRDLRQTAI-GGGANEIMLEVI 374


>gi|195395796|ref|XP_002056520.1| GJ10995 [Drosophila virilis]
 gi|194143229|gb|EDW59632.1| GJ10995 [Drosophila virilis]
          Length = 406

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++   +  D  Y L+G K W  ++  ++A ++ A    +     +
Sbjct: 146 FALSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGI 204

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301
             F+VP+ ++     G    + ++K+G R ++T +L F +             FGF +  
Sbjct: 205 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKESLLGETGFGFKIAM 259

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  G        I + S  + ++  + SL  A+ YA++R   G  +     +++ IAD
Sbjct: 260 QTLDAGR-------IGIASQALGIA--QASLELAVDYAQKRQAFGKPISKLQAIQQKIAD 310

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++L + +A  L++R A   D     ++EAA A++ A      C         + ++ +GG
Sbjct: 311 MSLAVESARLLTWRAAWLKDNKLPYTKEAAMAKLAASEAATLCAH-------QCIQVLGG 363

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY+ + +  RHYR++    I  G+
Sbjct: 364 MGYVTDMAAERHYRDARITEIYEGT 388


>gi|104784423|ref|YP_610921.1| polyketide synthase [Pseudomonas entomophila L48]
 gi|95113410|emb|CAK18138.1| putative polyketide synthase [Pseudomonas entomophila L48]
          Length = 669

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 43/287 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
              TE   G+D  +I +       G   L+G K W  S   +    + AQ          
Sbjct: 123 FAFTEPVAGSDARSIRTTATSQGAGYQRLNGQKAWIGSGAWAGVTTVFAQ---------- 172

Query: 259 PRLLEDGSPNGLCYQRLKN------------KIGNRSNATVELEFSNTF---GFLLGDLN 303
            +L E G P+G+    +K              +G R      ++F +      +LLG  N
Sbjct: 173 -QLDEAGRPSGISGYIVKAGTPGLEQGPEALTMGMRGMIQNIVDFKDAVVSERYLLGTRN 231

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 + + +   L  A +S+ GM+      + YA RR +S G+L+D PV +  ++D++
Sbjct: 232 AGMDIAQQIMMHARLGIAGLSLGGMKRCAQLMLRYAERRRISTGVLLDNPVTQARLSDVS 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEA----MEC 418
             I A   L F +    D+            I  P   Y  CK  AP +  EA     + 
Sbjct: 292 AAITAVDTLVFSIGRLMDQ-----------HIGVPDEVYTACKSTAPELFGEATDHLTQL 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G  GYIE   + +  R++    I  G    M + +   + KG ++F
Sbjct: 341 LGARGYIETNGVPQLLRDARILRIFEGPTETMNMYLGGRILKGADVF 387


>gi|27374374|gb|AAO01112.1| Arc42-PA [Drosophila pseudoobscura]
          Length = 405

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   +  D  Y L+G K W  +   + A ++ A    +     +  
Sbjct: 147 LSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISA 205

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+VP+ L+     G    + ++K+G R ++T +L F +       +LG+      P    
Sbjct: 206 FIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLGE------PGFGF 254

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD+  + ++G  + + +A     + YA++R   G  +     +++ IAD++L +
Sbjct: 255 KIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAM 314

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  ++ ++EAA A++ A      C         + ++ +GG GY+ 
Sbjct: 315 ESARLLTWRAAWLKDNKQAYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVA 367

Query: 427 ERSIARHYRESPANSILLGS 446
           +    RHYR++    I  G+
Sbjct: 368 DMPAERHYRDARITEIYEGT 387


>gi|312222404|emb|CBY02344.1| similar to isovaleryl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 443

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 127/266 (47%), Gaps = 30/266 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +++ DG Y L+G K W  + P +   ++ A+ +       +
Sbjct: 177 LAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTQPDAASKGI 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + D +  G    +  +K+G R + T EL F + F     +LG LN        +++L
Sbjct: 236 TAFIVDTTTPGFSVTKKLDKLGMRGSNTGELVFEDVFVPRENVLGQLN------RGVRVL 289

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L  A+ Y  +R   G  +    +++  +AD+   + A+
Sbjct: 290 MEGLDLERLVLSAGPLGLMQAALDNALPYTHQRKQFGIPIAHNQLVQGKLADMYTKLRAS 349

Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            + ++ +A + DE+      ++++ A A +       +  + A  V A+A++ +GG GY+
Sbjct: 350 QSFTYAVARAVDESYQSPDVKTQDCAGAIL-------YAAERASEVAADAIQLMGGMGYM 402

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            E  + R  R++    I  G+G + V
Sbjct: 403 NEVPVGRILRDAKLYEI--GAGTSEV 426


>gi|300692218|ref|YP_003753213.1| dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299079278|emb|CBJ51950.1| dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 397

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 20/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPDHGSDPASMVTRAKKV-DGGYSLSGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++    G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFLVWAKLPDDNGEDQIRGFILERGWKGLSAPAIHGKVGLRTSITGEIVLDEVF- 232

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILI 350
             + + N+  G V  +K     L+SA   ++   +  AE+  +  R++V      G  L 
Sbjct: 233 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLA 289

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A  
Sbjct: 290 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALD 342

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  + RH
Sbjct: 343 IARMARDMLGGNGISDEFGVIRH 365


>gi|289647594|ref|ZP_06478937.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 66/353 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            G L D       PV       ++R +      +  A  L    +  FD+ ++   E A 
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384

Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                LD+L                L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|239939873|ref|ZP_04691810.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986358|ref|ZP_04707022.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 434

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257
           L+E   G+D A++ ++  +  D         W     ++D   +LA+  VEG  G   FL
Sbjct: 177 LSEPASGSDAASLRTKAVRDGDDWVITGTKAWITHGGVADFCTVLARTGVEGARGITAFL 236

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T +L F    G  +GD        +   I L 
Sbjct: 237 VP-----GDAEGLNAALPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIALS 288

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  A
Sbjct: 289 ALDSGRLGIAACAIGVAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRA 348

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S +AA A       K +C   A  V  +A++ +GG GY  +  + 
Sbjct: 349 LYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVE 401

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I+ G+
Sbjct: 402 RLMREAKVLQIVEGT 416


>gi|154271889|ref|XP_001536797.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150408784|gb|EDN04240.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 428

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 45/256 (17%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 223

Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            F++ R   D  P G      +KNK   R++ T             G + + + PV +  
Sbjct: 224 GFIIER---DSCPPGTFETPMIKNKTALRASIT-------------GMIQMDSCPVPETN 267

Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357
           +L            L+SA + ++ G   +L + I  AR     R+   G  L+   ++++
Sbjct: 268 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLVRYQLVQK 327

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD A D A  T  +  +A   DE KS  E       M  I K   C  A        E
Sbjct: 328 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 380

Query: 418 CIGGSGYIEERSIARH 433
             GG+   +E  I RH
Sbjct: 381 IFGGNAVSDEYHIGRH 396


>gi|150395712|ref|YP_001326179.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027227|gb|ABR59344.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 593

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 186/450 (41%), Gaps = 80/450 (17%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDG 114
           LGE ++     E  R A+     L   G  G+R         VE    W  L    I  G
Sbjct: 31  LGEDLVDAILGEAGRFASEEVAPL---GDAGDRRGARLVGGTVETPEGWRDLYHNWIAGG 87

Query: 115 LHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
                W+    P     +   H +  A + +         ++P++T  ++ AL    T  
Sbjct: 88  -----WNGLTAPEAYGGQNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTEV 142

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +   + PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + 
Sbjct: 143 LKSVFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERCDDGTYRIF 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQ 273
           G K F++    D       ++LA++         +  FLVP+ L +G     + N L   
Sbjct: 190 GQKIFITWGEHDFTDNIVHLVLARLPDAPPGTKGISLFLVPKFLVNGDGSLGARNDLFCH 249

Query: 274 RLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            L++K+G   + T  + + +          G+L+G+ N     +  M     +++A ++V
Sbjct: 250 SLEHKLGIHGSPTCTMIYGDGRFGAEKGAVGYLVGEENRGLACMFTM-----MNNARLAV 304

Query: 326 SGMRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATA 371
               V++AEA     I YA+ R        SG G+  +I+ P + R +  +      + A
Sbjct: 305 GMQGVAIAEAATQKAIAYAKERRQGRAPGWSGEGMSPIIEHPDVARMLLTMKALTQGSRA 364

Query: 372 LSFRLANSFDEAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +++  A++ D A  +  EEA +    + ++ PI K +       V +  ++  GG G+IE
Sbjct: 365 IAYACAHAVDMAHFAEGEEARHWQERSSLLTPIAKSFATDAGVDVASLGVQVHGGMGFIE 424

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E   AR+ R++    I  G+     +D++ 
Sbjct: 425 ETGAARYLRDARIAPIYEGTNGIQAIDLVT 454


>gi|83952653|ref|ZP_00961383.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83835788|gb|EAP75087.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 29/270 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ +K   G Y L+G K F+S    SDA++++ +        +   
Sbjct: 124 LTEPGSGSDAAALKTRAEKTDQG-YRLNGTKAFISGGGYSDAYVVMCRTGDDSPKGISTL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
           L+EDG+P GL +  L++K+G RS  T +++F         D  V  G +  E+ +   Y 
Sbjct: 183 LVEDGTP-GLSFGALEDKMGWRSQPTAQVQFD--------DCTVPAGNLVGEEGRGFSYA 233

Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   +++S   +  A+      + Y   R   G  +     ++  +AD+ +++ AA
Sbjct: 234 MQGLDGGRLNISACSLGAAQTAMNLTLQYMSERRAFGKSIDQFQALQFRLADLEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                  A   D        A  A     + K +  +    ++ + ++  GG GY+ +  
Sbjct: 294 RTFLRHAAWKLDTG------APDATKFCAMAKKFVTETGSHIVNQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLL 458
           I +  R+   + IL G+   M L V  NLL
Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIVARNLL 377


>gi|332284726|ref|YP_004416637.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330428679|gb|AEC20013.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 607

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 48/281 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248
           + LTE + G+D+A + ++  +  DG Y LSG K F++    D       ++LA+      
Sbjct: 161 MNLTEPQAGSDLAQVATRAVRQDDGSYRLSGQKIFITYGEHDMAENIVHLVLARTPDAPK 220

Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------T 294
            V+G +  F+VP+ L  EDGS    N +    L++K+G   + T  L + +         
Sbjct: 221 GVKG-ISLFIVPKFLVNEDGSLGDRNDVWCASLEHKLGIHGSPTAVLLYGSGKGDVGEGA 279

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGIL-- 349
            G+L+G+ N     +E M I++      + + G+ +S     +A  YA  R V G  L  
Sbjct: 280 VGYLVGEENRG---LEYMFIMMNAARYAVGIQGVALSERAFQQATAYAHER-VQGQALEG 335

Query: 350 -------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396
                   + P ++R +  +      A +L++  A + D+++   ++A  A+       +
Sbjct: 336 SAGPVAIANHPDVQRMLFTMKALTEGARSLAYVAAAACDKSRRHPDQAERAKNKALYEYL 395

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            P+ K +  +++  V +  ++  GG G+IEE   A++YR++
Sbjct: 396 VPVVKGFSTELSIEVASLGVQVHGGMGFIEETGAAQYYRDA 436


>gi|228994060|ref|ZP_04153961.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|229007650|ref|ZP_04165243.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228753601|gb|EEM03046.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228765708|gb|EEM14361.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 379

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDPESKQRGTSAFIVESDALGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+     ++ YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA  L+++ A    E     +E+A +++ A  T       A  V  EA++  
Sbjct: 286 ADMATSVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|88705176|ref|ZP_01102887.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88700266|gb|EAQ97374.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 557

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 148/341 (43%), Gaps = 48/341 (14%)

Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           LM P ++   +  L    +P     + PK+ +  +  T             + LTE   G
Sbjct: 125 LMYPGLSHGCIKTLEAHGSPEQKAQYLPKLVAGNWTGT-------------MCLTESHCG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQV----EGRVGC--FL 257
           +D+  + ++ +  +DG Y ++G K F+S+    MSD    I++A++    EG  G   F+
Sbjct: 172 SDLGLLRTKAEPQADGSYAITGTKIFISAGEHDMSDNIVHIVIARMPDAPEGTKGISLFV 231

Query: 258 VPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+  + EDGS    NG+    ++ K+G +++AT  + F    G+L+G+ N     +   
Sbjct: 232 VPKFNVNEDGSLGERNGVHCASIEKKMGIKASATCVMNFDGAKGYLIGEPNRGLNMMFTF 291

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIA 360
                + +AI  ++   +S   ++ YAR     R ++G          +I  P ++R + 
Sbjct: 292 MNTARIGTAIQGLAHAELSYQGSLEYARERLAMRSLTGPKNPDGPADPIIVHPDVRRMLL 351

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEA 415
                   + A+ + LA   D      EEAA        ++ PI K +  +         
Sbjct: 352 TQKAIAEGSRAMLYYLAQLGDIVDRGDEEAAKKADDLMAVLTPIAKAFVTEAGLEAANHG 411

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G+I E  + +  R++   ++  G+     LD++ 
Sbjct: 412 IQIYGGHGFIREWGMEQIARDARIATLYEGTTGIQALDLIG 452


>gi|325928316|ref|ZP_08189516.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325541327|gb|EGD12869.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 423

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++ A  E   G   +  
Sbjct: 166 LTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGITA 225

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + D    G    + + K+G R++AT E+EF++        L V     E  K  +  LD
Sbjct: 226 FMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSVLD 282

Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   V +A A +     Y + R   G  +    + +  IAD+   + AA  L+ 
Sbjct: 283 AGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLLTL 342

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A    + +    EAA A++ A     W       +  +A++  GG GY +E  + R++
Sbjct: 343 RAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLERYF 395

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 396 RDAKITEIYEGT 407


>gi|319442756|ref|ZP_07991912.1| acyl-CoA dehydrogenase domain-containing protein [Corynebacterium
           variabile DSM 44702]
          Length = 393

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------ 254
           L+E   G+D AA+  + ++  D  Y L+G K W  +   +D + ++A+  G  G      
Sbjct: 127 LSEAHAGSDPAALAMRARREGDS-YVLNGSKAWVTNGGFADFYTVMARTSGEPGDGKGIS 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVP         G      + K+G   + T  L F +    +  D  +     + +KI
Sbjct: 186 CFLVP-----ADTPGFSAGPPERKMGLTGSPTAALTFDDVR--IPADQRIGE-EGQGLKI 237

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LDS  + +S     LA+     A+ YA+ R   G  +I+   +   +AD+   + +
Sbjct: 238 ALAALDSGRLGISACATGLAQGALDAAVDYAQERETFGQPIIEHQGLAFLLADMEAAVTS 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A     A   D  +  +EEA+ A++   +T     K    V  +A++ +GG+GY  + 
Sbjct: 298 SRATMLAAARLKDLGEPFAEEASMAKL---VTTDGAMK----VTTDAVQVLGGAGYTRDF 350

Query: 429 SIARHYRESPANSILLGS 446
            + R+ RE+    I  G+
Sbjct: 351 PVERYMREAKVMQIFEGT 368


>gi|149180899|ref|ZP_01859401.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1]
 gi|148851418|gb|EDL65566.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1]
          Length = 379

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 49/313 (15%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS        T    K W PK  + E+                + +TE   G+D
Sbjct: 93  IVVPYITSYG------TEEQKKRWLPKCTTGEF-------------ITAIAMTEPGTGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +A I +    +    Y L+G K F+++ + SD  ++  + + +     V  L+ +    G
Sbjct: 134 LANIKTTAV-LKGNHYILNGQKTFITNGIHSDLIVVACKTDPKAKHKGVSLLVVERDMTG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS------ 320
               R  NK+G  S  T EL F +       LLG         E+ K  IYL        
Sbjct: 193 FSRGRKLNKVGLHSQDTAELIFEDCVVPKENLLG---------EEGKGFIYLMEKLQQER 243

Query: 321 ---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              AI + +   V L + I Y + R   G  +      +  IA++A +I    A   +L 
Sbjct: 244 LLVAIAAQAASEVMLKQTIDYVKSRDAFGKPVSKFQNTQFKIAEMATEIEMTRAFLDQLI 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E ++   + + A       K+     A  + AE M+  GG GY+EE  IAR +R+ 
Sbjct: 304 AEHIEGENIVTKVSMA-------KWKMTDTAKKIAAECMQLHGGYGYMEEYEIARRFRDI 356

Query: 438 PANSILLGSGNAM 450
           P  SI  G+   M
Sbjct: 357 PVASIYAGTNEIM 369


>gi|48478468|ref|YP_024174.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus
           DSM 9790]
 gi|48431116|gb|AAT43981.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus
           DSM 9790]
          Length = 377

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 18/255 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           GL +TE   G+D A+I +   + S   Y L+G K F+S+  ++  F++ A  +       
Sbjct: 118 GLAITEPGAGSDAASIKTTAVR-SGNKYVLNGTKVFISNGRLARFFVVDASTDPERRAKG 176

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + D    GL   R  +K+G R ++TVEL F N     + + N+     E  K+++ 
Sbjct: 177 ITSFVVDADAPGLKISRDIHKLGIRGSSTVELVFDNV---EVPEENIIGNVNEGFKVIMD 233

Query: 317 YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++       + S  EA+ Y + R      +ID   ++  IAD+   I A+  
Sbjct: 234 TLDAGRIGIAAQALGIAKASFEEALKYIKERKQFNQRIIDFEGVQFMIADMETRIKASEL 293

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A  +   ++  E       ++ I K +    A  V   +++  GG GY  +    
Sbjct: 294 LVYDAAEKWQNHENTIE-------ISSIAKMYASDTAMYVAERSLQLFGGYGYTTDFDAE 346

Query: 432 RHYRESPANSILLGS 446
           RH R++    I  G+
Sbjct: 347 RHLRDAKITQIYEGT 361


>gi|291443305|ref|ZP_06582695.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346252|gb|EFE73156.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 390

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVG--CF 256
           L+E   G+D A++ ++  +  D  + ++G K W     ++D   +LA+  VEG  G   F
Sbjct: 133 LSEPASGSDAASLRTKAVRDGDD-WVITGTKAWITHGGVADFCTVLARTGVEGARGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G   GL     + K+G + + T +L F    G  +GD        +   I L
Sbjct: 192 LVP-----GDAEGLNAALPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +  S +AA A       K +C   A  V  +A++ +GG GY  +  +
Sbjct: 304 ALYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    I+ G+
Sbjct: 357 ERLMREAKVLQIVEGT 372


>gi|332141156|ref|YP_004426894.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551178|gb|AEA97896.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 609

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 40/339 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+  +  + +   DG Y L+G K F+S+   D       I+LA++    EG 
Sbjct: 164 LTEAHCGSDLGMLKCRAEPQEDGSYSLTGTKIFISAGEHDMSENIVHIVLARLPDAPEGT 223

Query: 253 VGC--FLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+  + E+G     N +    +++K+G +++AT  + F    GFL+G  N  
Sbjct: 224 KGISLFVVPKFNVSEEGEKQDRNAVACGSIEHKMGIKASATCVINFDGAKGFLIGPPNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +        + + +  ++    S   A+ YA+ R     ++G    D P        
Sbjct: 284 LNCMFTFMNTARIGTGLEGLAASEASFQGALRYAKDRIQFRSMTGRKNPDGPADPIIVHP 343

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + ++A A+    +AA       +    D A  + E  A    + PI K +  + 
Sbjct: 344 DVRRMLLTQKAFAEGNRALAAYCMQMVDVTLYGDNAAEKQEAEAKLAFLTPIVKAFLTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           A    +  M+  GG G+I+E  + +  R++   ++  G+     +D+L     G+N   +
Sbjct: 404 AQESTSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAVDLLGRKVMGSN--GE 461

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           L +   Q++    +     LRD+         L+  L E
Sbjct: 462 LLNVFVQEV----RDYCNSLRDNAQFSAWTNALSSHLDE 496


>gi|323486311|ref|ZP_08091636.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum
           WAL-14163]
 gi|323693899|ref|ZP_08108087.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           symbiosum WAL-14673]
 gi|323400293|gb|EGA92666.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum
           WAL-14163]
 gi|323502050|gb|EGB17924.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           symbiosum WAL-14673]
          Length = 379

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVG---- 254
            GLTE   G+D     +  +K  D  Y L+G K F  + P+SD F + A     +G    
Sbjct: 123 FGLTEPNAGSDAGGCVTIAEKKGD-KYILNGLKCFNTNGPLSDHFAVYALTHPELGSKGL 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
            CF V +    G+P G    +++NK+G RS    EL F N       LLG+        +
Sbjct: 182 SCFHVKK----GTP-GFSIGKIENKMGIRSAQVSELVFENCEIPETALLGEEK------Q 230

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + V+   + +AE A   AR+    R   G  L     +   +A++  
Sbjct: 231 GFKIAMKTLDGGRIGVAAQGLGIAEGAFEIARKYLMTREQFGKPLYRNQYLAFKMAELEC 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  + ++ A    E +  S  AA A+++       C   A  V  EA++ +GG+G+
Sbjct: 291 EIEQAKYMLYKAALDKSEGRPYSIPAAKAKLV-------CTDAAMHVTTEAVQMLGGNGF 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++E  + R  R++    I  G+
Sbjct: 344 MKEYHVERMMRDAKITQIYEGT 365


>gi|188989664|ref|YP_001901674.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167731424|emb|CAP49599.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris]
          Length = 387

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +   D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRAEARGD-RFVLNGNKMWITNGPDADVLVVYAKTDPGAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI E   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|109098972|ref|XP_001091115.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Macaca mulatta]
          Length = 412

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLVP         GL   + ++K+G R ++T  L F +       +LG+      P  
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++   + +A+     A +YA  R   G  L    V++  +AD+AL
Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMAL 319

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394


>gi|326433236|gb|EGD78806.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 634

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 42/293 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++  K  DG Y L+G K F+S    D       I+LA+ E      
Sbjct: 189 LTEPQCGTDLGQVKTKAVKQGDGSYKLTGTKIFISCGEHDFTENIVHIVLARTENSPAGT 248

Query: 253 --VGCFLVPRLLE--DGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             +  FLVP+ LE  DGS     N  C   +++K+G   + T  + F +T G+L+G    
Sbjct: 249 KGLSLFLVPKYLENSDGSLSKEKNVTC-GSIESKMGIHGSPTCVMHFEDTVGYLIGQ--- 304

Query: 305 STGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGIL---IDQPV 354
               +E M + +    + +A+  +    ++    + YAR R     +SG      +  P+
Sbjct: 305 EFKGLEQMFVFMNTARIGTALQGLGAAELAFQGGLTYARDRGSMRALSGTKAPEKVADPI 364

Query: 355 MKRAIADIALDIAAATALSFR--------LANSFDEAKSRSEEAAYARIMA---PITKYW 403
           +        L    A A   R        +++   +A++ +E  A    M    PI K  
Sbjct: 365 IHHGDVRRMLLTCKAVAEGARCMMYDVSMMSDYMLKARTEAERKAIDEEMGFLTPILKGC 424

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++        ++C GG GYI+E  + ++ R++   ++  G+     LD+L 
Sbjct: 425 ITELGLEAANLGVQCYGGHGYIKEWGMEQNVRDARIGTLYEGTTGIQALDLLG 477


>gi|330815686|ref|YP_004359391.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327368079|gb|AEA59435.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 395

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K++ G Y LSG K W  +
Sbjct: 114 FGSEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YALSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               LL +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLLPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLVQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIVKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|320011675|gb|ADW06525.1| Butyryl-CoA dehydrogenase [Streptomyces flavogriseus ATCC 33331]
          Length = 383

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 47/303 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   +    + W PK+ S E              A+G  GLTE   G+D   + ++
Sbjct: 95  AKTIASWGSEEQKRQWLPKLTSGE--------------AVGCFGLTEPGTGSDAGNLGTK 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G K F+++   +D  ++ A+     G   V   L      GL  + + 
Sbjct: 141 AVRDGDD-YVINGSKMFITNGTWADVVLLFARTGDTPGHRGVSAFLVPADAPGLTRRTIH 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPVEDMKILIYLDSAI----MSVSGM 328
            K+G R  AT EL        +L D+ V      GP  + K      SA+    MSV+  
Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASTLVGP--EGKGFSVAMSALAKGRMSVAAG 249

Query: 329 RVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+A     + YA  R   G  +    +++  I+DI++D+ AA  L++R+A+  D  
Sbjct: 250 CVGIAQAALDAAVRYAGEREQFGRSIASYQLVQELISDISVDVDAARMLTWRVADLVDRG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  A+ A++ A        + A      A++  GG GYI+E  + +  R++   ++ 
Sbjct: 310 QDFATAASTAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPVGKLVRDARVMTLY 362

Query: 444 LGS 446
            G+
Sbjct: 363 EGT 365


>gi|108761574|ref|YP_633755.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108465454|gb|ABF90639.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 601

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE+  G+D     ++     DG  + L+G K +++ +  +D F++ A+V+G +   F+V
Sbjct: 155 LTEQGSGSDALGAKTKAVLSPDGKHWILNGSKLYITNAAFADVFVVFAKVDGDKFTGFIV 214

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIY 317
               E  +P GL     ++K+G R ++T  L F +    +   L  V  G      IL Y
Sbjct: 215 ----EKDTP-GLTVGPEEHKMGIRGSSTCPLYFEDARVPVENQLGEVGKGHKIAFNILNY 269

Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L      + GM++ L  A+ + + R      ++  P+ +  +A +A  + A  ++++R
Sbjct: 270 GRLKLGAGVLGGMKLQLQNALRFTQERKQFNAPIVQFPLSREKLARMAALVYAVESMTYR 329

Query: 376 LANSFDEAKSRSEEAA---YARIMAPITKYWCCKMAPAV---------IAEAMECIGGSG 423
            A   D    + ++ A    AR++  + +Y        V         + +A++  GG+G
Sbjct: 330 TAGLVDARLGQGDKDAPDYEARLLEAVEEYAIESSIMKVHGSESFGHLVDDAVQLHGGAG 389

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YIEE  + R YR++  N I  G+
Sbjct: 390 YIEEYPVERSYRDARINRIFEGT 412


>gi|21243295|ref|NP_642877.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108834|gb|AAM37413.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 597

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 58/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y+R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKSPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  +      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|297624541|ref|YP_003705975.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165721|gb|ADI15432.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 16/251 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D  A+ ++ +   D +       W  +  +++  ++ A  +          +
Sbjct: 125 LSEPDNGSDAGAMKTRARLEGDEVVLNGTKMWISNGGLAELTVVFATFDPEAKHRGTLAV 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320
           + +G+P G+ YQ++  K+G R+  T EL F +     +   N+   P +  +I +  LD 
Sbjct: 185 VVEGTPPGMSYQKIHGKLGQRACVTAELVFEDV---RVPAANILGEPGDGFRIAMKTLDK 241

Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + V+   V LA     E+  Y+  RH  G  +     ++  +AD+ + I  A   +  
Sbjct: 242 TRIPVAAGSVGLARRALDESRRYSAERHAFGRPINSFQALQFKMADMKIGIETARLQTLY 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  +E +A       I K +   MA A   EA++  GG GY+ E  + +  R
Sbjct: 302 AAWLVDSGQPHTEASA-------IAKAYASDMAFAAANEAIQIHGGYGYVGEYPVEKLLR 354

Query: 436 ESPANSILLGS 446
           +   N I  G+
Sbjct: 355 DVKLNQIYEGT 365


>gi|229488597|ref|ZP_04382463.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324101|gb|EEN89856.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 21/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-------AQVEG 251
           + +TE   G+D+A I +  +  SDG  Y L+G K F++  +    I++       ++V  
Sbjct: 124 IAMTEPGAGSDLAGIKTTARLSSDGSHYVLNGSKTFITGGVQADLILVVARTSPPSEVNR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R G  +   L  D + +G    R   K+G R+  T EL F++       LLG+     G 
Sbjct: 184 RAGLSI---LCVDTTSDGFGVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +    +   L +A+ S +    ++     Y + R V G  +      K  +A+ + ++AA
Sbjct: 241 LTRNLVRERLGAAVGSYANASAAIEFTTEYVKEREVFGAPVAQFQNTKFVLAECSAEVAA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A   R  +  DE +  +   A ARI     K +C +MA  VI + ++  GG GY+ E 
Sbjct: 301 AQAAVDRALD-LDEIRELTVADA-ARI-----KLFCTEMAGRVIDKCLQLHGGYGYMREY 353

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I+R Y ++  N I  GS   M
Sbjct: 354 PISRLYADTRVNRIYAGSSEVM 375


>gi|284048916|ref|YP_003399255.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953137|gb|ADB47940.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 377

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 46/278 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
             LTE   G+D  A+ ++  K  D  Y L+G+K F+++  ++D+F++ A      G    
Sbjct: 121 FALTEPSAGSDAGAVATKAVKDGDH-YVLNGNKVFITNGGIADSFLVFANTRKTGGIRGL 179

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+     +P G    R ++K+G R + T EL        +L D+ V     E M+
Sbjct: 180 TAFIVPK----DTP-GFSVGRKEDKMGIRPSNTCEL--------ILEDVVVP----ESMR 222

Query: 314 I----------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
           +          +  LDSA   V+ + V LA+     A HYAR R   G  +    +++  
Sbjct: 223 VGREGQGFRIAMNTLDSARPFVAAVAVGLAQSCLDIAAHYARERRQFGQPIASFQMVQAM 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+A+ +  A  +  +     D+     +EAA       ++K +   +A  V  +A++ 
Sbjct: 283 IADMAMKVETARLMVHKACWMRDQGVEFGKEAA-------MSKCFASDVAMEVATDAVQI 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +GG GY+++  + +  R++    I  G+     + + N
Sbjct: 336 MGGYGYMKDYPMEKKMRDAKILQIYEGTNQIQRMVIAN 373


>gi|262281354|ref|ZP_06059135.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257180|gb|EEY75917.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AA+ ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAALKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQAIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+++  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|194290397|ref|YP_002006304.1| glutaryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224232|emb|CAQ70241.1| GLUTARYL-COA DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424]
          Length = 397

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYELTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++ G  G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLAGDDGKEDIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             + + N+  G V+ +K     L+SA   ++   +  AE     A  Y   R   G  L 
Sbjct: 233 --VPEENIMPG-VKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLA 289

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  
Sbjct: 290 QTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLD 342

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  + RH
Sbjct: 343 IARVARDMLGGNGISDEFGVIRH 365


>gi|86158089|ref|YP_464874.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774600|gb|ABC81437.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 387

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 22/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256
             L+E + G+D AA+ ++  +  D        +W  S  ++   ++ A+    +   G  
Sbjct: 123 FALSEPQAGSDAAAMRTRAVRRGDRWVIDGAKQWITSGDVAGVLVVWARTGPADAGGGGG 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           +   L+E G+P GL   R ++K+G R+++TV L F       S   G +   L V+   +
Sbjct: 183 VTAFLVEAGTP-GLHVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAAL 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I    A  +   +R +L  ++ YAR R   G  + +   +   +AD+A++   A
Sbjct: 242 DGGRVGI----ASQATGTIRAALEASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+ R A   +  +  + EA+ A       K W  + A   +  A++  GG GY E+  
Sbjct: 298 RLLALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFP 350

Query: 430 IARHYRESPANSILLGS 446
           +AR++R++   +I  G+
Sbjct: 351 VARYFRDARVQTIYEGT 367


>gi|262381115|ref|ZP_06074253.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|262296292|gb|EEY84222.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B]
          Length = 569

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 131/291 (45%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKREGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
            L ++ A   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 TLLYQTARYVDIYKALDDIARERKLTLEERKEQKQYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457


>gi|238026355|ref|YP_002910586.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
 gi|237875549|gb|ACR27882.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
          Length = 395

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 19/262 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D   ++++ + +  G Y LSG K W  +
Sbjct: 114 FGSEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGGMSTRAKPVPGG-YVLSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D FI+ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFIVWAKLEENGEDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF- 230

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351
             + + N   G          LDSA   +S   +  AE+  +  R++V      G  L  
Sbjct: 231 --VPEENRLPGVKGLRGPFTCLDSARYGISWGALGAAESCWHTARQYVLDRKQFGRPLAA 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A  V
Sbjct: 289 NQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALEV 341

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  +ARH
Sbjct: 342 ARLARDMLGGNGISDEFGVARH 363


>gi|71278527|ref|YP_271124.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71144267|gb|AAZ24740.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 602

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 140/345 (40%), Gaps = 58/345 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G+K F++    D       ++LA++       
Sbjct: 166 LTESHSGSDLGIIRTKAIPQDDGSYSITGNKIFITGGEHDLTENIVHLVLAKLPDAPAGP 225

Query: 253 --VGCFLVPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+  + D    G  N +    +++K+G  ++AT  + F ++ GFL+G+LN  
Sbjct: 226 RGISLFLVPKFNVNDDETLGEYNNVSCGSIEHKMGIHASATCVMNFDDSKGFLIGELNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--------HVSGGILIDQPV--- 354
              +  M     +   I  +S    S   A+ YA+ R          +G    DQ     
Sbjct: 286 LACMFTMMNFERIGVGIQGLSAAVRSYQNALEYAKDRLQGRALDSKTNGVKNPDQEADSI 345

Query: 355 -----MKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWC 404
                ++R + ++      + ALS  ++   D     E + + +    A +M PI K + 
Sbjct: 346 MVHGDVRRMLLNMKALNEGSRALSSYISMQLDYATYAEGEEQVKGETLAALMTPIAKAFF 405

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             +         +  GG GYI E    +  R++    I  G+     +D+L         
Sbjct: 406 TDLGFENTVAGQQVFGGHGYIREWGQEQLVRDARITQIYEGTNGIQAMDLL--------- 456

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKGLARFLT 505
                  + +  GS G  ++ +  D ++     C  D+ ++ F+T
Sbjct: 457 -------MRKVAGSKG-AMLKVFTDEVNTFIESCSHDQAMSEFIT 493


>gi|312960844|ref|ZP_07775349.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311284502|gb|EFQ63078.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLDGDH-YVLNGCKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  G
Sbjct: 170 TDPTAGKRGISAFIVP----TDSP-GYSVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  ++ I    A  +V   R +   A  YAR R   G  LI+   + 
Sbjct: 225 EEGEGYRIALANLEGGRVGI----ASQAVGMARAAFEAARDYARERESFGKALIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  K        A + A + K +  +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKP-------ALVEASMAKLFASEMAEKVCSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|293609434|ref|ZP_06691736.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827886|gb|EFF86249.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 378

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP      +  G    R+++K+G  ++ T  + F +     L +L    G  E  KI 
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATINFEDCR-IPLENLVGQEG--EGYKIA 233

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       +  A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I AA
Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ +  
Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDFP 346

Query: 430 IARHYRESPANSILLGSGN 448
           + R YR+   + I  G+ +
Sbjct: 347 VERIYRDVRVSQIYEGASD 365


>gi|319645561|ref|ZP_07999793.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2]
 gi|317392447|gb|EFV73242.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2]
          Length = 571

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 27/297 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D + A T+         + L+G K W  ++ ++D +++ A+    +  F+V 
Sbjct: 148 LTEPGAGSDALNAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKTAEGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
           R     S  G+     + K+G + ++T       VE+   N  G +    +V+   +   
Sbjct: 208 R-----SFKGVSIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILN-- 260

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A  ++   + +L  A+ YA++R      +I   +++  IAD+A+ I  A + 
Sbjct: 261 --MARLKLAFSNIGTAKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESA 318

Query: 373 SFRLANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++R A+  D           R  +         I K +C ++   +  EA++  GG GY+
Sbjct: 319 AYRTADCLDNVLDSALPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYM 378

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           +E  + R YR++  + I  G+     L +  LL K   + +   S  E  LGS G +
Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNR 433


>gi|329894555|ref|ZP_08270363.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328922993|gb|EGG30319.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 47/314 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++  +  DG + L G K F+S+   D       I++A++EG     
Sbjct: 165 LTEPHCGTDLGLLRTKAVRNDDGSFSLHGTKIFISAGEHDMAENIVHIVIARIEGAPEGT 224

Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + EDG+    N L    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 225 KGISLFVVPKVNVNEDGTLGGRNALNCASIESKMGIKASATCVMNFDGAKGYLIGPENRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353
              +        L +A+  +    ++   A  YAR     R ++G    D P        
Sbjct: 285 LNCMFTFMNAARLGTAVQGLCHAELAYQGAFSYARERLAMRSLTGPKNPDGPADPILVHP 344

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKY 402
                 + +RAIA+       + A  F LA   D  ++ +EE A        ++ PI K 
Sbjct: 345 DVRRMLLTQRAIAE------GSRAFLFFLALQGDIIRAGNEEQAKQADNLMALLTPIAKA 398

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEK 460
           +  ++        ++ +GG GYI E  + +  R++    +  G+     +D++   +L  
Sbjct: 399 FVTELGFEAANHGVQVLGGHGYIREWGMEQIVRDARIALLYEGTTGVQAMDLIGRKVLGS 458

Query: 461 GTNLFEQLFSTLEQ 474
           G  L     + +++
Sbjct: 459 GGKLLMDFTAIMDE 472


>gi|21230718|ref|NP_636635.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769286|ref|YP_244048.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992437|ref|YP_001904447.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21112310|gb|AAM40559.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574618|gb|AAY50028.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734197|emb|CAP52405.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 393

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKTRAQRDGDD-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            +      G+ Y R + K+G  S  T  + F++     G LLG      G    MK L  
Sbjct: 191 FVVAADAPGISYGRKEEKMGWNSQPTRGITFTDVRIPAGNLLG--KEGEGFKMAMKALDG 248

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +   
Sbjct: 249 GRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHT 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D           A +   + K +      A+  EA++  GG GYI E  I R  R
Sbjct: 309 AARKLDAGSHD------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIREYPIERLLR 362

Query: 436 ESPANSILLGSGNAM 450
           +S  + IL G+   M
Sbjct: 363 DSRVHRILEGTNEVM 377


>gi|330886281|gb|EGH20182.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 66/353 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            G L D       PV       ++R +      +  A  L    +  FD+ ++   E A 
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384

Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                LD+L                L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|325915813|ref|ZP_08178112.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537934|gb|EGD09631.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 393

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 32/274 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D A++ ++ Q+  D  Y L+G K F+S +  +D  +++A+   +G  G   F
Sbjct: 133 LTEPGAGSDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            VP         G+ Y R + K+G  S  T  + F++     G LLG         E  K
Sbjct: 192 AVP-----ADAPGISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLGKEG------EGFK 240

Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIA 367
           + +  LD   ++++   +  A+    A RR++      G  L D   ++  +AD+A  + 
Sbjct: 241 MAMKALDGGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLV 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    A   D           A +   + K +      A+  EA++  GG GYI E
Sbjct: 301 AARQMVHTAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIRE 354

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             I R  R+S  + IL G+   M + V   L  G
Sbjct: 355 YPIERLLRDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|254820427|ref|ZP_05225428.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 611

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 159/376 (42%), Gaps = 61/376 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +     +++ +      A+ YA+ R V G             
Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPI 399
             +   P ++R++           AL    +   D + + +     A        +M P+
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLFTSTYQDASVAEALHGVDAELAVKVNDLMLPV 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + A A + E+++  GGSG++++  I ++ R++  +S+  G+      D      
Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462

Query: 457 LLEKGTNLF---EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           + +KG  L    EQ+   ++ + G+              L  E + LA+ LT+  A+A+S
Sbjct: 463 VRDKGVALAHVSEQIQKFVDSESGNG------------RLKTEREYLAKALTDVQAMATS 510

Query: 514 AAALYRAGMNDIADVF 529
                 A   D+  ++
Sbjct: 511 LTGYLMAAQEDVTSLY 526


>gi|167644418|ref|YP_001682081.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346848|gb|ABZ69583.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 17/266 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I+++ + +  G + ++G K F+++   +D  +++ + +   G   +
Sbjct: 125 VAMTEPGAGSDLQRISTRAEPVEGG-FRVTGQKTFITNGQNADLIVIVCKTDPAAGGKGI 183

Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
             L LE     G    R   KIG  +  T EL F +TF     +LG L    G V+ M+ 
Sbjct: 184 SLLVLETEGAEGFTRGRNLKKIGMHAQDTSELFFQDTFIPKSHVLGVLG--GGFVQLMQQ 241

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  +  A+ +V+ M  +L   I Y + R   G  +ID    +  +A+     AA+ A 
Sbjct: 242 LAWERMVIALDAVACMERALEVTIDYVKSRTAFGKQVIDYQNTQFKLAE--CKTAASVAR 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            F      DE   R      +   A + K W  +    VI + ++  GG GY+EE  IAR
Sbjct: 300 IF-----VDELMVRLIAGELSPETAAMAKLWTTETQAKVIDDCLQLHGGYGYMEEYPIAR 354

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            Y ++ A  I  G+   M + +   L
Sbjct: 355 LYADARATRIYGGTNEIMKMIIARTL 380


>gi|219664379|gb|ACL31229.1| acyl-CoA dehydrogenase [Rhodococcus sp. TFB]
          Length = 383

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVG 254
            GLTE   G+D   + ++  +  D  + L+G+K F+++   +D  ++ A+  G     V 
Sbjct: 123 FGLTEPDTGSDAGNLKTRATRDGDD-WILNGNKIFITNGTWADVCLVFARTGGPGPKGVS 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLVP         G     +  K+G R  AT EL F         LLG         + 
Sbjct: 182 AFLVPT-----DTPGFGRTEIHGKLGLRGQATAELSFDGVRVPASALLGAEG------DG 230

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI ++ LD   +SV+   V + +      + Y+ +R   G +L    +++  IADI++D
Sbjct: 231 FKIAMHSLDKGRVSVAAGCVGIIQGCLEAVVDYSTQRQQFGRLLASFQMIQDMIADISVD 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L++R AN  +  +     A+ A       KY+  + A      A++  GG GY+
Sbjct: 291 ADAARLLTWRAANLIERGEPFGTAASKA-------KYFASEAAVRAANLAIQAFGGYGYV 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +E  + ++ R++   ++  G+     L ++   E G + F
Sbjct: 344 DEYPVQKYMRDARVMTLYEGTSQIQKL-LIGRAETGVSAF 382


>gi|104782574|ref|YP_609072.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48]
 gi|95111561|emb|CAK16281.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 30/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  
Sbjct: 110 APLASGAMLGAFALTEPQAGSDASSLKTRARLDGDH-YVLNGSKQFITSGQNAGVVIVFA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           V     G+ G   F+VP         G    R+++K+G  ++ T ++ F N        L
Sbjct: 169 VTDPDAGKRGITAFIVPT-----DAPGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+      ++   +E  +I I    A  SV   R +   A  YA  R   G  LI+   +
Sbjct: 224 GEEGQGYKIALANLEGGRIGI----ASQSVGMARAAFEVARDYANERQSFGKPLIEHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V ++A
Sbjct: 280 AFRLADMATRIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 333 LQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|299536960|ref|ZP_07050265.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298727540|gb|EFI68110.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 397

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 31/269 (11%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ 248
           Q   V IG  GLTE   G+D+AA+T+    + DG  Y L+G K W     ++D FI+ A 
Sbjct: 114 QAKGVRIGAFGLTEPGAGSDVAAMTTTA--VRDGNHYILNGQKTWISLCDIADHFIVFAY 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +       +  F+V R     S  G   + +K K G R+  T EL F +     L   N
Sbjct: 172 TDKSKKHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFED---LRLPIEN 223

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
                 E  KI +  LD+   +V+   V L +A     + Y   R   G  + +  ++ R
Sbjct: 224 RLGEEGEGFKIAMSALDNGRFTVAAGAVGLIQACIEASVKYCHERETFGKPIGEHQLVGR 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++      +  L +R+    ++    + E + A       K+  C  A     +A++
Sbjct: 284 MIANMEAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQSCDFANKAADDAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY +E  +AR+ R S A  I  G+
Sbjct: 337 IHGAYGYSDEYPVARYLRNSKAPVIYEGT 365


>gi|21717402|dbj|BAC02933.1| acyl-CoA dehydrogenase B [Acinetobacter sp. M-1]
          Length = 599

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+  I S+ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 165 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 224

Query: 253 --VGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP      +++  S       + ++K+G   NAT  + F    G+L+G  N  
Sbjct: 225 KGISLFIVPNSTSMLMVQLASVMQYVVVQFEHKMGIHGNATCVINFDQAKGYLIGPENRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  +S    S   A+ YA+     R +SG          +I  P
Sbjct: 285 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + LA   D  E     EE  +A     ++ PI K +  + 
Sbjct: 345 AVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 404

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 405 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 452


>gi|55978205|ref|YP_145261.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|55773378|dbj|BAD71818.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 378

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 39/268 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ ++  +  D  Y L G K F+S + +++ F++ A+ +   G     C
Sbjct: 120 LTEPEAGSDAASLKTRAHREGD-FYVLEGQKTFISHANVAEVFLVFAKTDPEKGAKGITC 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310
           FLV R       +G+    LK K+G R+        ++T    L  + V    V     E
Sbjct: 179 FLVER------GDGVKTSPLKGKLGLRA--------ADTGMVFLDGVRVPKDRVLGKEGE 224

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +I L  LD+  +S++   V L +     ++ Y R R   G  +    +++  +A + L
Sbjct: 225 GFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYTRERKQFGKPIAQFQLVQEHLAAMKL 284

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+ AA  L++R A    + +  + EA+ A++ A        + A  V   A++  GG G+
Sbjct: 285 DLEAARLLTYRAAWKKVKGEPYTLEASLAKLFA-------SEAANRVAYRAIQVHGGYGF 337

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
            EE  +AR YR++   ++  G+     L
Sbjct: 338 FEEYEVARLYRDARILTLYEGTSEVQKL 365


>gi|326382721|ref|ZP_08204411.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198311|gb|EGD55495.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 28/283 (9%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ S E             V   + +TE   G+D+  + ++  K  D  Y + G K 
Sbjct: 112 WLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKTKAIKDGDD-YVIDGSKT 157

Query: 234 FLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++   +D  I++A+ +   G   +  ++ +    G    R+ +K+G R   T EL F+
Sbjct: 158 FITNGGQADVVIVVAKTDSTEGAKGISLIIVETEREGFSRGRILDKVGMRGQDTAELNFT 217

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                   LLGD     G ++ M  L    L   + SV+GM V+L + + Y + R   G 
Sbjct: 218 GVRVPQANLLGDQE-GLGFIQLMTQLPQERLIIGVASVAGMEVALEKTLEYTKERTAFGR 276

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A++A +   A           D+   +            ++K+W  + 
Sbjct: 277 PIYGFQNTKFKLAEVATEAHIARVF-------IDDCIEQHLRGELDIPTVAMSKWWTTEK 329

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  V    ++  GG GY+ E  IAR + ++    I  G+   M
Sbjct: 330 AMEVADTCLQLFGGYGYMNEYPIARMWADNRVQMIYGGTNEIM 372


>gi|323486322|ref|ZP_08091647.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum
           WAL-14163]
 gi|323693887|ref|ZP_08108075.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323400304|gb|EGA92677.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum
           WAL-14163]
 gi|323502038|gb|EGB17912.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 384

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 31/273 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD  A   Q + + DG  + L+G K F+++   +D ++++A
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKIFITNGKEADVYVIIA 170

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
                    GR    +   ++E G+P G  +   + K+G R +AT EL F++       L
Sbjct: 171 VTGIKEDARGRKKKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDCRIPKENL 229

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
           LG      G       +  LD   + ++   + LAE      + Y + R   G  +    
Sbjct: 230 LGQQGKGFGIA-----MHTLDGGRIGIAAQALGLAEGALERTVEYVQERKQFGRTIGQFQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  +AD+A  + AA  L +R A +    K  S EAA A++       +  ++A  V  
Sbjct: 285 NTQFQLADMATKVKAAQLLVYRAAMAKKTQKVYSVEAAMAKL-------YAAEVAMEVTT 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY  E  + R  R++    I  G+
Sbjct: 338 KAVQLHGGYGYTREYDVERMMRDAKITEIYEGT 370


>gi|291539138|emb|CBL12249.1| Acyl-CoA dehydrogenases [Roseburia intestinalis XB6B4]
          Length = 384

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 27/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251
             LTE   GTD  A  +Q + + DG  + L+G K F+++  ++D +I++A         G
Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R        +++ G+P G  +   + K+G R ++T EL F +     +   N+     + 
Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236

Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             I ++ LD   + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  
Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMATR 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L ++ A +    K  S EAA A++ A  T       A AV  E ++  GG GYI
Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYGYI 349

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++    I  G+
Sbjct: 350 REYDVERMMRDAKITEIYEGT 370


>gi|166714162|ref|ZP_02245369.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 387

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 43/311 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++  +        
Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADA-RGAR 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  + P +D  ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKL-DKLGMRG 211

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL FS       N  G L G + V    ++  ++++      +  + M V+L    
Sbjct: 212 SNTCELVFSDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALP--- 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  + +  +M+  +AD+ + + A  A  + +A + D  ++  ++AA A + 
Sbjct: 269 -YVHERKQFGEPIGNFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A     W       +  +A++ +GG+GYI +    R +R++    I  G+G + +  +L 
Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377

Query: 457 LLEKGTNLFEQ 467
               G  LFE+
Sbjct: 378 ---IGRELFER 385


>gi|324999836|ref|ZP_08120948.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 402

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 25/279 (8%)

Query: 184 DPTNKAPMQKTSVAIG----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           DP  +A + + S   G    + L+E   G+D+AA+ ++  +  D  Y ++G K W  ++ 
Sbjct: 114 DPDRRAELLRRSARGGWIGAIALSEPDAGSDLAAVETRAVRDGD-EYVVTGRKRWTGNAK 172

Query: 239 MSDAFIMLAQV------EGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            +D   +L +       E R      +V     D  P+GL    + +KIG     T +LE
Sbjct: 173 AADFVQVLVRTADPEPGEKRSAGLATVVVEKQRDTFPDGLTGTPI-DKIGYHGFVTWDLE 231

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYL---DSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F      +   L        D +  + +    +A  +V   R ++ + + Y +RR     
Sbjct: 232 FDGLRVPVANQLGAGGEGFADAQAWLNIARVHTAARAVGLARAAVEDCVRYLQRRRQFEH 291

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D   ++  +A +A  +  A +    +A+  D+ +S   EAA A+++A        +M
Sbjct: 292 PIGDFQAVRFTLATMAARVEQARSFYQHVAHRLDQGESCEREAAMAKLVA-------TEM 344

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A  V A+ ++  GG+GY  E  + RH+R++   +I  G+
Sbjct: 345 AAEVTADGIQLHGGNGYTTEHQVERHWRDARLTTIFEGT 383


>gi|222053281|ref|YP_002535643.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221562570|gb|ACM18542.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 583

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  +  +     +DG  Y L+G K F++ S  +D F + A+++G     FLV
Sbjct: 147 LTEPDCGSDPLSSRTTATLSADGRHYILNGTKQFITNSAFADLFTVFAKIDGLHFSAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            +  E     G      + K+G R ++T +L   N       LLG+         ++  +
Sbjct: 207 EKSFE-----GFSVGAEEKKMGLRGSSTTQLVLDNVKVPVENLLGEPGKGHKIAFNVLNV 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A  ++   + +  EA  YA  R   G  + +   ++  +AD+   I A+  + +R
Sbjct: 262 GRLKVATQALGMSKGAFGEAASYATERKQFGRTIGEFGAIREKLADMTAAIFASETVIYR 321

Query: 376 LANSFDEAKS---RSEEAAYARIMAPITKY---------WCCKMAPAVIAEAMECIGGSG 423
           +A   D   +    S    Y R    I +Y         +C +    V+ EA++  GG G
Sbjct: 322 VAGLLDSRLALLDHSGSDYYERYQKAIEEYAAECAIAKVFCTEQLDMVVDEAVQIHGGYG 381

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI E  + R+YR+S    I  G+
Sbjct: 382 YIAEYPVERYYRDSRIQRIFEGT 404


>gi|26991626|ref|NP_747051.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24986719|gb|AAN70515.1|AE016693_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 46/297 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248
           + LTE   G+ +A I ++ +   DG Y L G+K F+S     +S+  +  +LA+      
Sbjct: 162 MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPP 221

Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+   +     G  N +    L +K+G R   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKYHVNPNGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280

Query: 300 GDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344
           G  +     +  M    +I + + + ++  +G   SL     YAR+R           H 
Sbjct: 281 GQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQGRLPDNKDPHS 336

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAP 398
               +I+   +KR +      +  A  L    A  FD+  +  +E A         ++ P
Sbjct: 337 PAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAPDENARKPAQDLLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           I K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L
Sbjct: 397 IVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 453


>gi|299771467|ref|YP_003733493.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298701555|gb|ADI92120.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 403

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLSGAKMWITN 177

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIAAVEGTS-------LIKRNNC 342

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370


>gi|296162108|ref|ZP_06844905.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887614|gb|EFG67435.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 379

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 48/334 (14%)

Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKDW-APKI--FSREYDPTNKAPMQKTS 195
           Y     + GH  +++  V  A +  L     VH D  AP I     E       P   T 
Sbjct: 62  YGGGGGDFGHAAILNEEVNRAGLSGLGFG--VHSDIIAPYIARIGNEEQKQKWLPKTCTG 119

Query: 196 VAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
            AI  +G+TE   G+D+ AI +   +  D  Y ++G K F+S+ + +D  I++ + +   
Sbjct: 120 EAILAIGMTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSA 178

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLL 299
           G   V  ++ + +  G    R  +K+G  S  T EL F N               F +L+
Sbjct: 179 GSRGVSLIVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLM 238

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+L     P E + I      AI + + +   L   I+Y + R      + D    K  +
Sbjct: 239 GEL-----PQERLSI------AIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKL 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           ADI    A ATA+   + +   E   R    EEAA A++ A        +     + + +
Sbjct: 288 ADIK---AQATAVRVLVDHYLAEHVRRRLTLEEAAIAKLFA-------TESLGKALDDMV 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  +AR + ++  N I  G+   M
Sbjct: 338 QLHGGYGYMLEYPVARAFADARVNRIYGGTSEVM 371


>gi|254719954|ref|ZP_05181765.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265984964|ref|ZP_06097699.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|306838543|ref|ZP_07471381.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264663556|gb|EEZ33817.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|306406410|gb|EFM62651.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 384

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTATDVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|195055316|ref|XP_001994565.1| GH15455 [Drosophila grimshawi]
 gi|193892328|gb|EDV91194.1| GH15455 [Drosophila grimshawi]
          Length = 336

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 17/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D +A ++  +    G Y L+G K W  +S  +   ++ A ++  +    +  
Sbjct: 77  LSEPGSGSDASAASTTAKLNGSGDYLLNGTKAWISNSKEASGGLVFATIDKSLKHKGITA 136

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
           LL      GL   + +NK+G R+++T +L  ++     +    V  G     +I +  LD
Sbjct: 137 LLTAKDVPGLTIAKRENKLGMRASSTCQLVLND---VAIPQSQVLGGAGHGFRIAMESLD 193

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++     +A+A     + YA +R   G  L    ++++ +AD+AL +  A  L++
Sbjct: 194 CGRIGIAAQATGIAQAALELAVDYADKRVAFGQRLSRLQLIQQKLADMALRVETARLLTW 253

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D   S ++EAA A++ A  T  +C         + ++ +GG GY  +     +Y
Sbjct: 254 RAAWLKDNGLSITKEAAMAKLHASETATFCAH-------QCIQILGGMGYTTDLPAELYY 306

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R +    I  G+     + + N + KG
Sbjct: 307 RNARVTEIYEGTSEIQRIVIANCIMKG 333


>gi|289624132|ref|ZP_06457086.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330865822|gb|EGH00531.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 568

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 151/353 (42%), Gaps = 66/353 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ--------PVMKRA-IADIALDIAAATALSFRL----ANSFDEAKSRSEEAAY 392
            G L D         P+++ A +  + L   A    +F L    +  FD+ ++   E A 
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384

Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                LD+L                L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|311742614|ref|ZP_07716423.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314242|gb|EFQ84150.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 381

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 120/291 (41%), Gaps = 30/291 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ S E             V   + +TE   G+D+  I ++  +  D  Y
Sbjct: 106 TEEQKQHWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAAREGDE-Y 151

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            +SG K F+++   +D  + + + +       +  +L   S  G    R+ +KIG +   
Sbjct: 152 VVSGSKTFITNGSQADLVLTVVKTDPDDRAAGISLMLVPTSAEGFSRGRVLDKIGMKGQD 211

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
           T EL F N       LLG L    G V+ M+ L    L  A+ +V+ M   LAE + Y R
Sbjct: 212 TSELFFDNVRVPVTNLLG-LTEGQGFVQLMQQLPQERLLVAVSNVAAMEFCLAETLAYVR 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPI 399
            R   G  +      K  +A++A +         R+A SF DE              A +
Sbjct: 271 DRTAFGRPIWGFQNTKFKMAEVATEA--------RVARSFVDECIQLHVGEGLDIPTAAM 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            K WC + A  V    ++  GG GY+ E  IAR + +   + I  GS   M
Sbjct: 323 VKLWCSERAQRVADTCLQLHGGYGYMNEYPIARVWADMRVSQIYAGSSEIM 373


>gi|193713629|ref|XP_001947919.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 411

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++   K S   + L+G K W  ++  + A ++ A  +       +
Sbjct: 151 FGLSEPGNGSDAGAASTMAVK-SGSSWILNGTKSWITNAHEAKASVVFATTDKTKKHKGI 209

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLV R        G    + ++K+G R ++T  L F +     + + N+   P    K
Sbjct: 210 SAFLVRREYP-----GFSLGKKEDKLGIRGSSTSNLIFEDCS---IPEENILGEPGMGFK 261

Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I ++ LD+  + ++   + +A+A     + YA +R   G  +     ++  IAD++L + 
Sbjct: 262 IAMMTLDAGRIGIASQALGIAQASLDVAVEYATKRIAFGAPISKLQSIQNKIADMSLRVE 321

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGY 424
           +A  L++R A   DE K  ++EAA A++ A          + A    A +CI   GG GY
Sbjct: 322 SARLLTWRAAVLKDEHKPYTKEAAMAKLAA----------SEAATFNAHQCIQVLGGMGY 371

Query: 425 IEERSIARHYRESPANSILLGS 446
           + +    RHYR++    I  G+
Sbjct: 372 VSDMPAERHYRDARITEIYEGT 393


>gi|126273321|ref|XP_001376267.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, short/branched
           chain [Monodelphis domestica]
          Length = 389

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 28/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++ +K  D  Y ++G K W  ++  +  F+++A V   +G     C
Sbjct: 133 LSEAEAGSDAFALKTKAEKKGD-YYIINGSKMWISNAEHAGIFLVMANVNPGLGYKGITC 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F++ R  E     GL   + +NK+G R+++T  + F N     + + N+        K  
Sbjct: 192 FIIDRDTE-----GLQVGKKENKLGIRASSTNTVIFENV---KVPETNILGQVGHGYKYA 243

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  +     ++   A +A  + AA
Sbjct: 244 IGMLNEGRIGIAAQMLGLAQGCFDHTIPYLKERMQFGKTIYSFQGIQHQTAQVATQLEAA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG GY +   
Sbjct: 304 RLLTYNAARLVENGKPFVKEASMA-------KYFSAEVAGLTTSKCIEWMGGVGYTKNYP 356

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +++R++   +I  G+ N  +  +  LL
Sbjct: 357 MEKYFRDAKIGTIYEGTSNIQLSTIAKLL 385


>gi|227498681|ref|ZP_03928825.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904137|gb|EEH90055.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 635

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   G+D     ++   + DG  + L+G+K F+++   +D +++ A
Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVFDGKNWILNGNKIFITNGGEADTYVVFA 170

Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
             +   G   +   +LE G P G  +    +K+G RS+AT EL F+N       LLG L 
Sbjct: 171 VTDPDAGTRGISAFILEKGMP-GFTFGDHYDKLGIRSSATAELIFNNVKVPQENLLGRLG 229

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
                 +  KI +  LD   + ++   + +A+     A++Y++ R   G  +     +  
Sbjct: 230 ------QGFKIAMATLDGGRIGIAAQALGIAQGAYEAALNYSKERIQFGAPICQNQGVSF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L +  A      + ++E   Y  + + + K +   +A  +  +A++
Sbjct: 284 KLADMATRLRAARFLVYSAA------EMKTEHMDYG-MQSAMAKLYASDLAVEITNDALQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG+GY++   I R YR++   +I  G+
Sbjct: 337 IFGGTGYLKGMDIERMYRDAKITTIYEGT 365


>gi|148550023|ref|YP_001270125.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148514081|gb|ABQ80941.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 600

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 46/307 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + LTE   G+ +A I ++ +   DG Y L G+K F+S     +S+  +  
Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHM 211

Query: 245 MLAQ-------VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+  +  DGS    N +    L +K+G R   +  L F 
Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFG 270

Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           +     G+L+G  +     +  M    +I + + + ++  +G   SL     YAR+R   
Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQG 326

Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA- 393
                   H     +I+   +KR +      +  A  L    A  FD+  + ++E     
Sbjct: 327 RLPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENTRKL 386

Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W           A++ +GG GY  E  + ++YR++  N I  G+  
Sbjct: 387 AQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446

Query: 449 AMVLDVL 455
              LD+L
Sbjct: 447 IQSLDLL 453


>gi|313901888|ref|ZP_07835307.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
 gi|313467829|gb|EFR63324.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
          Length = 604

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 51/309 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     ++     DG  Y L+G K W  +S  +D F++ A+V+G ++  F+V
Sbjct: 159 LTEPDAGSDALGGKTRAVLSPDGKHYILNGQKQWITNSGFADVFVVYAKVDGDKMTAFIV 218

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316
            R     S  G+       K+G        ++ S+T    L D+ V   PVE++   +  
Sbjct: 219 ER-----SFPGVSVSEEVRKMG--------IKGSSTRTLYLNDVPV---PVENVLHEVGK 262

Query: 317 --YLDSAIMSVSGMRVS----------LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             ++   I+++   +++          +A A  YA+ R   G  +   P++++ +A +A 
Sbjct: 263 GHHIAFNILNIGRWKLAAGNLGACKELIALATQYAQGRKQFGQPIASFPLIQQKLAAMAA 322

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPAV 411
              A  A+ +R A +FD + S  ++ A             YA + A I K +  +    V
Sbjct: 323 RTYALEAMVYRTAGAFDASLSEIDQDAPDAGRQAITAISEYA-VEASINKVFGSETLDFV 381

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVL--DVLNLLEKGTNLFEQ 467
           + EA++  GG GY++E  + R YR++  N I  G+   N +++  +++    KG     Q
Sbjct: 382 VDEAVQIHGGYGYMQEYEVERAYRDARINRIFEGTNEINRLLIPRELMRRTMKGQLPLMQ 441

Query: 468 LFSTLEQDL 476
             S +++DL
Sbjct: 442 ALSRVQKDL 450


>gi|294828426|ref|NP_714108.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|293386280|gb|AAN51126.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 72/369 (19%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P+I + +Y             +  + LTE   G+D+  + ++  + ++GI+ ++G 
Sbjct: 170 EKWIPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDANGIWRINGA 216

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLK----------N 277
           K F++      +I    V        +  L   GSP     GL +  +K          +
Sbjct: 217 KRFITHAC--GYINAPSV--------ILTLARTGSPESGARGLSFFLVKGSDVHIAGVEH 266

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   + T E+ F N+ G L+G     TG       +  +++A ++++   + +A A +
Sbjct: 267 KLGLHCSPTCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAY 322

Query: 338 YARRRHVSGGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------- 381
           Y  +++ S  I   +P+ +    R I D +  +I A   L      + D           
Sbjct: 323 YEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHLIK 382

Query: 382 -EAKSRSEE---------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            E KS  E             A +  P++KY+  +   A+ ++A++  GGSGY E+  +A
Sbjct: 383 IEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVA 442

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITI 486
           R YR+S   +I  G+    ++  +  +  G +   QL    E +L         KKV   
Sbjct: 443 RIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVWKD 502

Query: 487 LRDSISLCK 495
           L  SI L K
Sbjct: 503 LDTSIGLYK 511


>gi|195396182|ref|XP_002056711.1| GJ10063 [Drosophila virilis]
 gi|194143420|gb|EDW59823.1| GJ10063 [Drosophila virilis]
          Length = 408

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 120/263 (45%), Gaps = 19/263 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D +A ++  +  ++G Y LSG K W  +S  +   ++ A ++  +    +  
Sbjct: 149 LSEPGSGSDASAASTTAKFNANGDYLLSGTKAWISNSKEASGGLIFATIDKSLKHKGITA 208

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
            L +    GL   + ++K+G R+++T +L         S+  G   G   ++   ++  +
Sbjct: 209 FLTEKDVPGLSVGKKESKLGMRASSTCQLTLDDVCVPQSHVLGTPGGGFKIAMESLDCGR 268

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I    A  S    + +L  A+ YA +R   G  L    ++++ +AD+AL +  A  L+
Sbjct: 269 IGI----AAQSTGIAQAALELAVDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLT 324

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D     ++EAA A++ A  T  +C         + ++ +GG GY  +     +
Sbjct: 325 WRAAWLKDHGLPITKEAAMAKLHASETATYCAH-------QCIQILGGMGYTTDLPAELY 377

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
           YR +    I  G+     + + N
Sbjct: 378 YRNARVTEIYEGTSEIQRIVIAN 400


>gi|13310129|gb|AAK18172.1|AF290950_4 FadFx [Pseudomonas putida]
          Length = 375

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKARARLDGDH-YVLNGSKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 170 TDPEAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLG 224

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 E  KI L  L+   + ++   V +A A       YA  R   G  LI+   +  
Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYAHERQSFGKALIEHQAVAF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V ++A++
Sbjct: 282 RLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+ +  + R YR+     I  G+ +
Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|52080477|ref|YP_079268.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52785859|ref|YP_091688.1| hypothetical protein BLi02106 [Bacillus licheniformis ATCC 14580]
 gi|52003688|gb|AAU23630.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52348361|gb|AAU40995.1| putative protein [Bacillus licheniformis ATCC 14580]
          Length = 571

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 27/297 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D + A T+         + L+G K W  ++ ++D +++ A+    +  F+V 
Sbjct: 148 LTEPGAGSDALNAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKTAEGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
           R     S  G+     + K+G + ++T       VE+   N  G +    +V+   +   
Sbjct: 208 R-----SFKGVSIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILN-- 260

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A  ++   + +L  A+ YA++R      +I   +++  IAD+A+ I  A + 
Sbjct: 261 --MARLKLAFSNIGTAKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESA 318

Query: 373 SFRLANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++R A+  D           R  +         I K +C ++   +  EA++  GG GY+
Sbjct: 319 AYRTADCLDNVLDSALPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYM 378

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           +E  + R YR++  + I  G+     L +  LL K   + +   S  E  LGS G +
Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNR 433


>gi|85703746|ref|ZP_01034850.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672674|gb|EAQ27531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 380

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + ++G Y L+G K F+S    SDA++++ +  G  G   +  
Sbjct: 124 LTEPGSGSDAAALKTRADRTNEG-YTLNGTKAFISGGGYSDAYVVMVRT-GSDGPKGIST 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
           +  +    GL Y  L++K+G RS  T +++F N         N+S+  +  E+ K   Y 
Sbjct: 182 VYVEAGTAGLSYGGLEDKMGWRSQPTRQVQFDNC--------NISSENMVGEEGKGFTYA 233

Query: 318 ---LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   +++S   +      L + + Y   R   G  +     ++  +AD+ +D+ AA
Sbjct: 234 MSGLDGGRLNISACSLGAAQQGLTQTLRYMAERKAFGKPIDQFQALQFRLADMEIDLQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D       +A  A     + K +  +    V+ + ++  GG GY+ +  
Sbjct: 294 RTFLRQAAWKLD------NDAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           I +  R+   + IL G+   M L V
Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372


>gi|330823850|ref|YP_004387153.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309222|gb|AEB83637.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 549

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 32/284 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           + +TE   G+D+A +  +  + ++G + L+G K W   +  +   +++A+ +     G  
Sbjct: 270 IAMTEPDFGSDVAGLQLKATR-AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHR 328

Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300
           G    LV +   +G          G  + R    IG R   + +L F N F      + G
Sbjct: 329 GLSLLLVEKPAFEGHEFAVAQEGGGTLHGRAIPTIGYRGMHSFDLVFENFFVPDENLVGG 388

Query: 301 DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           D  +  G    M  ++   + +A  ++  MR ++  AI YA  R V G  L+   + +  
Sbjct: 389 DAGLGKGFYFTMTGMMGGRMQTAGRALGVMRAAVRAAIRYAGDRQVFGAPLVSYQLTQVK 448

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA +A    A   L++ +A   D    R E        A + K   C+ A  V  EA++ 
Sbjct: 449 IAAMAARFVACRWLAYDVARLLDAGGGRME--------ASLVKLLACRSAELVTREALQI 500

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
            GG GY EE +++R++ ++   SI  G+   + L V+  +LLE+
Sbjct: 501 HGGMGYAEETAVSRYFVDARVLSIFEGAEETLALKVIARSLLEQ 544


>gi|329847548|ref|ZP_08262576.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328842611|gb|EGF92180.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 382

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 32/331 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 69  HVIAMEEISRASASIGLSYGAHSNLCVNQINRNGTPEQKAKYLPKLISGDHVGALAMSET 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  + +D  Y L+G K W  + P +D  ++ A+ +   G   +   L +
Sbjct: 129 GAGSDVVSMRLRADRKND-RYVLNGSKMWITNGPDADVLVVYAKTDMDAGSKGITAFLIE 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F +    +  +LG             ++  LD  
Sbjct: 188 KDFTGFSVAQKLDKLGMRGSHTGELVFEDCEVPYDNVLGTEGRGAAV-----LMSGLDYE 242

Query: 322 IMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + +SG     MR  L   I Y   R   G  +    +M+  +AD+    AA  A  + +
Sbjct: 243 RVVLSGGPLGIMRACLDAIIPYIHDREQFGQAIGTFQLMQGKVADMYSTWAACRAYVYAV 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D  ++  ++AA   + A     W       +  EA++C+GG+GY  E  + R +R+
Sbjct: 303 AQACDRGETTRKDAAGCILYAAEKATW-------MAGEAIQCLGGNGYTNEYPVGRLWRD 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +    I  G+G + +  +L     G  LFE+
Sbjct: 356 AKLYEI--GAGTSEIRRML----IGRELFEE 380


>gi|326576565|gb|EGE26472.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis
           101P30B1]
          Length = 608

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 52/331 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406
            ++  +           AL + L+  F +  ++ E   E  +A     ++ PI K +  K
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTK 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                    ++  GG GYI E  + ++ R++  + +  G+     LD+L           
Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497
                  + LGS G+ +    +     C+E+
Sbjct: 453 ------RKVLGSQGRMLANFTQIIHQFCQEN 477


>gi|260222383|emb|CBA31892.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 393

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 34/291 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ + E+              +G L ++E   G+D+ ++  + +    G 
Sbjct: 109 TPEQRAKYLPKLITGEH--------------VGALAMSEPGAGSDVLSMKLKAED-KGGY 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ E  +G   V   L + S  G    +  +K+G R +
Sbjct: 154 YLLNGNKMWITNGPDADTLVVYAKSEPELGARGVTAFLIEKSMPGFSIAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEA 335
            T EL F+N       +LG +N         K+L+  LD     +SG     M+  +   
Sbjct: 214 HTGELVFNNVEVPLANVLGQVNGGA------KVLMSGLDYERAVLSGGPLGIMQSVMDNV 267

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  + +  +++  +AD+   + A  A ++ +A + D     +E     R 
Sbjct: 268 IPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRAFAYTVAKNLDLLG--AEHVRQVRK 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  W  + A  +  E ++  GG+GYI E  + R +R++    I  G+
Sbjct: 326 DCASVILWTAEKATWMAGEGVQIFGGNGYINEYPLGRLWRDAKLYEIGAGT 376


>gi|21229724|ref|NP_635641.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66766601|ref|YP_241363.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21111212|gb|AAM39565.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66571933|gb|AAY47343.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 387

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRAEARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPSAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI E   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|152977528|ref|YP_001377045.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026280|gb|ABS24050.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 376

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 38/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFLV 258
           LTE   G+D  ++ S+   I DG  Y ++G K F+++   +D +I+ A      G   + 
Sbjct: 124 LTEPGAGSDAGSLKSRA--IKDGNQYVINGSKIFITNGGEADTYIVFASTNPEAGKSGIS 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
             ++E G+P GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 182 AFIVEKGTP-GLIIGKDEHKMGLHGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     + YA+ R   G  +  Q  +   +AD+A 
Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERKQFGKPIAAQQGVGFKLADMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A+   +     +EA+ A++ A        K A  V  EA++ +GG GY
Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEASVAKLFA-------SKTAVEVAIEAVQVLGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
            +E  + R +R++    I  G+
Sbjct: 343 TKEYPVERFFRDAKICEIYEGT 364


>gi|255318748|ref|ZP_05359975.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378073|ref|ZP_06071230.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304246|gb|EET83436.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299358|gb|EEY87270.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 16/242 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A++ +   K  D  Y L+G K F++ +P + AF ++A+    + G   + 
Sbjct: 124 LTEPESGSDAASLRTTAVK-DDDFYILNGTKRFITNAPHAGAFTVMARTNSEIKGARGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L 
Sbjct: 183 AFIIDSKTPGISLGKRDQKMGQKGAHTCDVIFENCRVPASALIGGVE-GVGFKTAMKVLD 241

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A +SV      L +A+ YA  R   G  +    +++  +AD   +I AA  +  
Sbjct: 242 KGRLHIAALSVGAAVRMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEIYAAKCMVL 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D+ ++ S EA+        +K +  +M   V    ++  GG+GYI E SI R Y
Sbjct: 302 DAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYISEYSIERFY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|229591979|ref|YP_002874098.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363845|emb|CAY51303.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 382

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 28/290 (9%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P V +  AP++ S E               I L +TE  GG+D+A++ +   +  D  Y 
Sbjct: 108 PEVRERVAPQVLSGEK-------------IIALAVTEPGGGSDVASLQTHATRDGDH-YR 153

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +SG K F++S +   F  +A   G  G   +  LL +    G    +   K+G  ++ T 
Sbjct: 154 VSGSKTFITSGIRADFYTVAVRTGGPGFAGISLLLIEKDTPGFSVGQPLKKMGWWASDTA 213

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F +     G L+G  N+    +        L  A+M+    +++L E++ +A +R  
Sbjct: 214 ELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANMTAQMALEESLKWAAQREA 273

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    V+K  +A++A  +  +   ++R A       S  +E + A+ +A  T    
Sbjct: 274 FGKPIGKFQVLKHRLAEMATAVEVSREFTYRQAAKMAAGISVIKEISMAKNLATDT---- 329

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL-LGSGNAMVLD 453
              A  V  +A++ +GG GY+    + R YR+   N IL +G G   V++
Sbjct: 330 ---ADRVTYDAVQILGGQGYMRGSLVERLYRD---NRILSIGGGTREVMN 373


>gi|66811156|ref|XP_639286.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium
           discoideum AX4]
 gi|74854817|sp|Q54RR5|ACDSB_DICDI RecName: Full=Probable short/branched chain specific acyl-CoA
           dehydrogenase; Short=SBCAD
 gi|60467914|gb|EAL65927.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium
           discoideum AX4]
          Length = 413

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 25/273 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  + SDG + L+G K W  ++  +  FI++A V+   G   +  
Sbjct: 154 LSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITA 213

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            + + +  GL   + ++K+G R+++T E+   N       +LG+L          KI I 
Sbjct: 214 FIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVKPTDILGELG------RGYKIAIE 267

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + ++   + LA+      I Y   R   G  +     M+   AD+A+DI A   
Sbjct: 268 GLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQGMQFTYADLAVDIEAGRL 327

Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L++  A        R +EA    +  A + K  C ++A    +  +  +GG G+ +E   
Sbjct: 328 LTYNAA--------RIKEAGLPFVFQASMAKLHCSRVAEKAASACISMLGGVGFTKEFPA 379

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            + +R+S    I  G+ N  +  +   + K  N
Sbjct: 380 EKFFRDSKVGQIYEGTSNIQLQTIAKEIVKNFN 412


>gi|311070236|ref|YP_003975159.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310870753|gb|ADP34228.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 379

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 28/270 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA-----QVEGRVG 254
           GLTE   G+D   + +  ++I D  Y L+G K F+++   +D +I+ A     Q +  V 
Sbjct: 124 GLTEAGSGSDAGGMKTVAERIGDD-YLLNGSKIFITNGGAADIYIVFAVTDPEQRKKSVT 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V +  E     G    + + K+G RS+ T E+ F +    L+   N      E  KI
Sbjct: 183 AFIVEKGFE-----GFSIGKKEKKLGIRSSPTTEIIFEDC---LVPAKNRLGEEGEGFKI 234

Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD     ++   V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMSTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKPVAEQQAIAFKLADMATMIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L+++ A          + +A ++++A  T       A  V  EA++  GG GY ++ 
Sbjct: 295 SRLLTYQAAWLESSGLPYGKASAMSKLLAGDT-------AMKVTTEAVQIFGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R+ R++    I  G+     L +  +L
Sbjct: 348 PVERYMRDAKITQIYEGTQEIQRLVISRML 377


>gi|254440209|ref|ZP_05053703.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198255655|gb|EDY79969.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 378

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++   ++D  Y L+G+K F+S    SDA+I++A   G  G   +  
Sbjct: 124 LTEPASGSDAASLKTKAD-VTDTGYALTGNKAFISGGGYSDAYIVMAST-GVSGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNTFG-FLLGDLNVSTGPVEDMKILI- 316
            + +    G+ +  L++K+G RS  T  V+LE  N  G  LLG ++   G    MK L  
Sbjct: 182 FVVESGAEGVSFGGLEDKMGWRSQPTRQVQLEKCNISGDNLLGVID--QGFKYAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+   + +L + IHY   R   G  L     ++  +AD+ +D+ +A     +
Sbjct: 240 GRLNIAACSIGAAQSALDKTIHYMAERQAFGQSLDQFQALQFRLADMEIDMQSARTFLRQ 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D           A +   + K  C +    +  + ++  GG GY+ +  I +  R
Sbjct: 300 AAWKLDCQDPD------ATVFCAMAKKLCTETGSRIADQCLQLHGGYGYLADYGIEKIVR 353

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 354 DLRVHQILEGTNEIM 368


>gi|157694120|ref|YP_001488582.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
 gi|157682878|gb|ABV64022.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
          Length = 380

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   + +   K +   Y L+G K F+++  ++D +I+ A  +          
Sbjct: 125 LTESGSGSDAGGMRTTAVK-AGSEYVLNGAKIFITNGGIADYYIVFAVTDQEAASRNTTA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    G    + ++K+G RS+ T E+ F +     + + N      E  KI ++ LD
Sbjct: 184 FIVEKETPGFSVGKKESKLGIRSSPTTEIRFEDC---RIHEKNRLGQEGEGFKIAMMTLD 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                ++   V +A+     A+HYA+ R   G  +I Q  +   +AD+A  I A+  L++
Sbjct: 241 GGRNGIAAQAVGIAQGALDAAVHYAKERKQFGKPIIQQQGIAFKLADMATAIEASRLLTY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A    +     +E+A +++ A  T       A  V  EA++  GG GY ++  + R+ 
Sbjct: 301 QAAWLETKGLPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGYGYTKDYPVERYM 353

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 354 RDAKITQIYEGT 365


>gi|295707242|ref|YP_003600317.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804901|gb|ADF41967.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 377

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 28/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           PM         GLTE   G+D   + +    + DG  Y L+G K F+++   +D +++ A
Sbjct: 113 PMATGEKIGAYGLTEPSAGSDAGGMRTLA--VKDGEDYILNGSKIFITNGGEADIYVVFA 170

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +    E R   F++ + +      G    + + K+G RS+ T E+ F +     +   N+
Sbjct: 171 RNDPNEKRTSAFIIEKDMP-----GFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENL 222

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
                E  K+ ++ LD     ++   V +A+     A+ YA+ R   G  +I Q  +   
Sbjct: 223 LGNEGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L+++ A    +     +E+A       ++K +    A  V  EA++ 
Sbjct: 283 LADMATSIEAARLLTYQAAWLESQGLPYGKESA-------MSKLYAGDTAMKVTTEAVQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY ++  + R  R++    I  G+     L +   L K
Sbjct: 336 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRYLAK 377


>gi|295675288|ref|YP_003603812.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435131|gb|ADG14301.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 376

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 32/273 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLA 247
           P+ +  +     LTE + G+D +A+ +   +  DG  Y L+G K F++S  + D  I++A
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATR--DGAAYVLNGVKQFITSGKNGDVAIVMA 168

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295
             +   G      F+VP      S  G    R+++K+G  S+ T ++ F       +N  
Sbjct: 169 VTDKTAGKRGISAFIVPT-----STPGYVVARVEDKLGQHSSDTAQIVFEECRVPAANLI 223

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G       ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     +
Sbjct: 224 GAEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALTYAKERESFGAPLFSHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A
Sbjct: 280 QFRLADMATQLEAARQLIWHAASLKDTGQPCLTEAAMAKLFA-------SEAAERICSAA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++  GG GY+ +  + R YR+     I  G+ +
Sbjct: 333 LQIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|218894289|ref|YP_002443159.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218774518|emb|CAW30335.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 596

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y +S
Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189

Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272
           G K F+S    D       ++LA+       V+G +  FLVP+ + +     G  N L  
Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +  +T  + F    G+LLG  N     +  M     ++ A   V    + +
Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303

Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369
           AE     A+ YAR R  S  ++  Q       P++           ++ + +    +A+ 
Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLASC 363

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A    L +   +A  R      A ++ PI K +   +   V +  ++  GG G+I E  
Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + +  R+S    I  G+     LD++
Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449


>gi|289661727|ref|ZP_06483308.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 597

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 58/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A + V    + L+E     A+ Y+R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 459 ASQAAGLKLFLADVETFAKAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|325285451|ref|YP_004261241.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324320905|gb|ADY28370.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 389

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +  +K  D  Y L+G K F+++ + +D  ++ A+    +G   +
Sbjct: 125 LCVTEPFGGSDVAGMRTTAEKKGD-TYVLNGSKTFITNGVYADYMVVAAKTSPELGNKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + D +  G+   +L NK+G R++ T E+ F N       L+G+       +     L
Sbjct: 184 SIFMVDKNTVGVSASKL-NKLGWRASDTAEIAFDNVTIPAANLMGEEGKGFSYIMQHFAL 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + + +    +L  A  Y   R   G  +     ++   +D+  D+      ++ 
Sbjct: 243 ERLVMGVNAHARAEFALDYARQYMSERSTFGKTIDKYQALRHTYSDLYADMEICREYNYS 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A   ++ +   +EA        I+K    KMA  VI   ++ +GG GY+E+  +AR  R
Sbjct: 303 VAYRLNKGEYVVKEAT-------ISKLKSTKMADEVIYGCLQFLGGYGYMEDYPMARMLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|315925783|ref|ZP_07921990.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620892|gb|EFV00866.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 377

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++T+  +   D  Y ++G K F+++  ++D +++ A V+   G   +
Sbjct: 121 FGLTEPNAGSDAGSVTTTAELDGDH-YVINGRKTFITNGGVADVYVVFASVDKSKGLKGL 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G+   + +NK+G R + T ++ F N    ++   N+     E  KI ++ 
Sbjct: 180 SAFIVEKKTPGISVGKEENKMGIRLSNTTDVVFDNV---VIPRANLLGKEGEGFKIAMMT 236

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD A   V  +   +A     E I Y + R   G  +    V++  +AD+ +   AA A+
Sbjct: 237 LDLARPFVGAIACGIAQRAINECIAYMKERVQFGKPIAKLDVLRNKLADMEIKKEAAVAM 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D  K  S EAA       I K +    A  V  EA++  GG GY  E  + +
Sbjct: 297 VEHVFKMIDLGKRYSREAA-------IAKAFAGDTAVEVAMEAIQIHGGYGYSREYPVEK 349

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 350 LLRDAKIFQIFEGT 363


>gi|256059546|ref|ZP_05449745.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261323514|ref|ZP_05962711.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261299494|gb|EEY02991.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|319787232|ref|YP_004146707.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465744|gb|ADV27476.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 385

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 24/258 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257
           L ++E   G+D+        ++ DG++  +G+K W  + P +D  ++  +  G+  G   
Sbjct: 124 LAMSEPGAGSDVVGSMRCSAELRDGVWIANGNKMWITNGPEADVLLVYMRTAGKEAGSRC 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   + +    G    +  +K+G R + T EL F N       +LG++N      + +++
Sbjct: 184 MTAFIVERGMRGFSTAQKLDKLGMRGSNTCELVFDNCEIPQENVLGEVN------QGVRV 237

Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD+  + ++G     M+ +L  A+ Y R R      +    +M+  IAD+   + +
Sbjct: 238 LMSGLDTERLVLTGGPIGLMQSALDIALPYVRERKQFDAAIGTFGLMQGKIADMYTALQS 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A ++++A  FDE + RS  AA   ++         + A  V  E ++ +GG+GYI E 
Sbjct: 298 SRAFAYQVARDFDEGR-RSRAAAAGCLLH------ASEAAVQVALEGIQALGGNGYINEY 350

Query: 429 SIARHYRESPANSILLGS 446
              R  R++   +I  G+
Sbjct: 351 PAGRILRDAKLYAIGAGT 368


>gi|121535631|ref|ZP_01667437.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121305801|gb|EAX46737.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 377

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 20/265 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FL 257
             LTE   G+D  A+ +   K  D  Y L+G K F+++  ++D +++ A      G   L
Sbjct: 121 FALTEPGAGSDAGAVATSAVKDGD-YYVLNGTKCFITNGGIADIYVVFANARKSAGIRGL 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
              ++E  +P G    + ++K+G R++ T EL   N     +   N      E  KI + 
Sbjct: 180 TAFIVERDTP-GFSVGKDEDKMGIRASNTCELILDNV---RIPAANRIGREGEGFKIAMK 235

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+A   V  + V LA+A     + Y+R R   G  +    +++  IAD+A+ I AA  
Sbjct: 236 TLDAARPFVGAVSVGLAQAAFELAVKYSREREQFGKPIASFQLVQAMIADMAMQIEAARL 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++     D+    ++EAA A+  A  T       A  V  + ++ +GG GY ++    
Sbjct: 296 LVYKACWMKDQGLPYAKEAAMAKCFAADT-------AMKVTTDVVQVLGGYGYTKDYPAE 348

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           ++ R++    I  G+     L + N
Sbjct: 349 KYMRDAKIMQIYEGTNQIQRLVIAN 373


>gi|319785584|ref|YP_004145060.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171472|gb|ADV15010.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 390

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 45/296 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
           K W PK+ + E               IG + +TE   G+D+  + ++ QK  DG  Y ++
Sbjct: 119 KKWLPKLATGEL--------------IGAIAMTEPGAGSDLQGVKTRAQK--DGNQYKIN 162

Query: 230 GHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           G K F+++     FI++       +G  G  L+  ++E     G    R  +KIG ++N 
Sbjct: 163 GSKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFQRGRNLDKIGLKAND 220

Query: 286 TVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
           T EL F       SN  G   G      G V+ M+ L    L     +++ +  +LA  I
Sbjct: 221 TSELFFNDMRVPTSNLLGHEEGQ-----GFVQLMQQLPQERLQIGTGAIAMIERALALTI 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  +ID    +  +A++  +              +++  +R        + 
Sbjct: 276 DYVKERKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVARHIAGGLDPVT 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A + KYW   +   V+ E ++  GG GY+ E  IAR +R++    I  G+   M L
Sbjct: 329 ASMAKYWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 384


>gi|297560543|ref|YP_003679517.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844991|gb|ADH67011.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 598

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 68/332 (20%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +      + L+E + G+ +A IT++ ++  +G Y L G+K ++S+   +       +
Sbjct: 152 PMVEGRFTGTMCLSEPQAGSSLADITTRAEEDGEGGYRLFGNKMWISAGDHELTENIVHL 211

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS- 292
           +LA++ G       +  F+VP+ L +     G  N +    L +K+G R      L F  
Sbjct: 212 VLAKIPGGPPGVRGISLFVVPKYLLEADGTIGERNDVVPAGLNHKMGYRGTVNAMLNFGE 271

Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYL----------DSAIMSVSGMRVSLA 333
                       G+L+G+      P + +K + ++           +A +  +G   SLA
Sbjct: 272 GRHAPGGRPGAVGYLVGE------PHQGLKYMFHMMNGARIGVGAGAAAVGYTGYLKSLA 325

Query: 334 EAIHYARRRHVSGGILIDQ-------PVM-----KRAIADIALDIAAATALSFRLANSFD 381
               YAR R + G  L D+       P++     +R +      +  A AL    A   D
Sbjct: 326 ----YARER-LQGRPLGDKDPGQPQVPIVEHTDVRRMLLAQKSYVEGALALVLYCARLVD 380

Query: 382 EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           E  S  ++ A  R      ++ PI K W  +      + A++  GG GY  E  + +HYR
Sbjct: 381 ETASAEDDKARERAHLLLDVLTPIAKSWPSQWCVEANSLAIQVHGGYGYTREYDVEQHYR 440

Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  N I  G+     LD+L    +L+ G+ L
Sbjct: 441 DNRLNPIHEGTHGVQALDLLGRKAVLDGGSRL 472


>gi|326385218|ref|ZP_08206884.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196077|gb|EGD53285.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 608

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 42/286 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A T++  +  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGTTKATQQEDGTWHIEGVKRFITSADQDMTENIFHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLG 300
             +  F VP+   D      G  NG     +++K+G +++AT E+ F    +   G+L+G
Sbjct: 224 KGLSLFFVPKFHFDHETGELGDRNGAFVTGVEHKMGIKASATCEVSFGLHGTPAKGWLVG 283

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--------- 351
           +++     + D+     +     ++S +      A+ YA+ R V G  L           
Sbjct: 284 EVHKGIAQMFDVIEHARMMVGTKAISTLSTGYLNALEYAKER-VQGADLTQMMDKAAPRV 342

Query: 352 ----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPIT 400
                P ++RA+           A+    A+  D A ++    A A        ++ PI 
Sbjct: 343 TITHHPDVRRALLTQKAYAEGLRAVYLYTASHQDPAAAQIVSGADAEMAHKVNDLLLPIV 402

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           K    + A   + E+++ +GGSG++++  I ++ R+S  +S+  G+
Sbjct: 403 KGVGSERAYEKLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGT 448


>gi|317483816|ref|ZP_07942756.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila
           wadsworthia 3_1_6]
 gi|316924919|gb|EFV46065.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila
           wadsworthia 3_1_6]
          Length = 371

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 21/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +        LTE   G+D+ AI +  + +  G Y ++GHK F+++   +D +I+ A+
Sbjct: 106 PMLRGDKLGAFALTEPEAGSDVGAIATTAE-LDGGFYVINGHKIFITNAGRADIYILFAR 164

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             G+ G   +   +      GL     + K+G R   T EL   N    +  D  +   P
Sbjct: 165 TGGQ-GTEGLSAFVVCSDDAGLLISAPQRKMGIRGAQTCELFLRNLC--IPADRLIGR-P 220

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAEA------IHYARRRHVSGGILIDQPVMKRAIAD 361
            +  +I +  LD   + ++   V +A+A      +    RR   G  L     ++   AD
Sbjct: 221 GDGFRIAMETLDGGRLGIAAQAVGIADAAFDEACVRLKERRQF-GRTLEHFQGLRWKAAD 279

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L+   A   D  K    EA+ A+++A     WC        +EA++  GG
Sbjct: 280 MWAKVEAARQLTLYAARLRDGGKRFRAEASAAKLVASEAAVWCA-------SEAVQICGG 332

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           SGY++     R YR++    I  G+
Sbjct: 333 SGYLQGSVAERLYRDAKITQIYEGT 357


>gi|289668680|ref|ZP_06489755.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 597

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 149/355 (41%), Gaps = 56/355 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTENIVHLVLAKLPDAPAGA 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G     
Sbjct: 226 KGISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQ---- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV- 354
             P + ++ +   +++A + V    + L+E     A+ Y+R     R +SG    D+P  
Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPAD 339

Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401
                  ++R +  I      +  L+   A+  D A      + R++       + PI+K
Sbjct: 340 PIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPISK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---- 457
               + +      A++C GG GYI E  + +  R++   +I  G+     LD++      
Sbjct: 400 ACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAA 459

Query: 458 -LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
               G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 460 SQAAGLKLFLADVETFAKAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|330806831|ref|YP_004351293.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327374939|gb|AEA66289.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  A+ ++ +K+  G Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKVEGG-YSLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++  + + G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 174 SPIADVFVVWGKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                +  D+    GP         L+SA   +S   +  AE     A  Y   R   G 
Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I  A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  +ARH
Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361


>gi|224367429|ref|YP_002601592.1| acyl-CoA dehydrogenase family protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223690145|gb|ACN13428.1| acyl-CoA dehydrogenase family protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 601

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 36/312 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S+E   T   PM        + LTE   G+ ++ IT+       G Y + G K F+S+  
Sbjct: 142 SKELIDTYLPPMLAGRWQGTMALTEPHAGSSLSDITTTAFPTDKGFYAIKGQKTFISAGD 201

Query: 240 SDAF-----IMLAQVEGR------VGCFLVPRLL-EDGSP---NGLCYQRLKNKIGNRSN 284
            D       +MLA++EG       +  F+VP+L  E G     N +    + +K+G R  
Sbjct: 202 HDGVDNVVHLMLARIEGEPAGSKGISLFVVPKLRPETGGKFVSNDVVVAGVYHKLGYRGA 261

Query: 285 ATVEL---EFSNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIH 337
              EL   E ++  GFL+G+ N     +  M    ++ + L +  ++ +    +L  A+ 
Sbjct: 262 PITELSIGEKNDCRGFLVGEKNRGLACMFQMMNEARLGVGLGATAIATAAYYAALDYAME 321

Query: 338 YARRRHVSGG-------ILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAK 384
             + R +S          +I+ P +KR      AI + +L +     L   LA +  +  
Sbjct: 322 RPQGRRLSEKNPATPQVPIIEHPDVKRMLLFQRAIVEGSLSLCLQCCLYTDLAKT-TQGD 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +        ++ PI K +  +M     ++A++C GG GY E+  + +++R+S  + I  
Sbjct: 381 EQQRNLLLLDLLTPIAKSYPSEMGILSTSQAIQCFGGYGYCEDFPVEQYFRDSRIHPIHE 440

Query: 445 GSGNAMVLDVLN 456
           G+     +D+L 
Sbjct: 441 GTTGMQGMDLLG 452


>gi|255952857|ref|XP_002567181.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588892|emb|CAP95007.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 429

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 5/251 (1%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +++ DG + L+G K W  + P +D  ++ A+ E  +G   +
Sbjct: 163 LAMSEHSAGSDVVSMKTTAKEV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPELGSKGI 221

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    R  +K+G R + T EL F + F     LLG++N     + +   L
Sbjct: 222 TAFLVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFVPRENLLGEVNRGVRVLMEGLDL 281

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  +   +  M+ +L   + Y   R   G  +    +++  +AD+   +AA+ A ++ 
Sbjct: 282 ERLVLSAGPLGIMQAALDLVLPYTHVRKQFGAPIAHNQLVQGKLADMYTKLAASRAYTYA 341

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D A     E             +  + A     +A++ +GGSGYI E    R  R
Sbjct: 342 TARQVDNAAVEPGELTVRTQDCAGAILYAAERATECTLDAIQLMGGSGYINEIPAGRLLR 401

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 402 DAKLYEIGAGT 412


>gi|85710062|ref|ZP_01041127.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688772|gb|EAQ28776.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 443

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 120/256 (46%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + + +  G Y L+G K W  ++  +D  ++ A+ +G  G   +
Sbjct: 184 LAMSEASAGSDVVSMKLKAEAVQGG-YVLNGTKFWITNATYADTLVVYAKTDGNAGSRGI 242

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +   K+G R + T EL F +       ++G LN   G      ++
Sbjct: 243 TAFLIEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPEDRVMGPLNGGVGV-----LM 297

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++G+++ + +A     I Y R R   G  +    +M+  +AD+ + +  A 
Sbjct: 298 SGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLMQAKVADMYVALQTAR 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++ +A + D  ++   +AA   + A  + +        V AE+++ +GG+GY  +  +
Sbjct: 358 AYTYAVAKACDADQTTRFDAAGVILYASESAF-------KVAAESVQALGGAGYTLDWPV 410

Query: 431 ARHYRESPANSILLGS 446
            R+ R++    I  G+
Sbjct: 411 ERYMRDAKLLDIGAGT 426


>gi|304393471|ref|ZP_07375399.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303294478|gb|EFL88850.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 599

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 136/300 (45%), Gaps = 43/300 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----- 249
           + LTE + G+D+ A+ S+ + + DG Y + G K +++     M+D  +  +LA++     
Sbjct: 160 MNLTEPQAGSDLNALKSRAEPVGDGSYRVFGQKIYITYGEHEMTDNIVHLVLARLPDAPA 219

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLG 300
            +  V  FLVP++LEDG+ N +    +++K+G  ++ T  + + +          G+L+G
Sbjct: 220 GQRGVSLFLVPKVLEDGTRNDVYCHSVEHKLGIHASPTCTMLYGDGKFGDEPGAIGWLIG 279

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI-------LID 351
           + N     +  M     +  AI   +    +  +A+ YA  RR+  + G        +I 
Sbjct: 280 EENRGLACMFTMMNNARIMVAIQGTAVAEAATQKALAYAQERRQGKAEGFDGEGMAPIIH 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---------------YARIM 396
            P ++R IA +     A+  +++  A++   A   +  +A                A ++
Sbjct: 340 HPDVQRNIATMRALTNASRTIAYNCAHAIARADELNHASARNGGEPTPEMPFWQNRAALL 399

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K +   +   V +  ++  GG G++EE   A+  R++    I  G+     +D++ 
Sbjct: 400 TPVAKAFATDIGCEVASIGVQVHGGMGFVEETGAAQLLRDARIAPIYEGTNGIQAIDLVT 459


>gi|254428827|ref|ZP_05042534.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194996|gb|EDX89955.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 379

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 149/381 (39%), Gaps = 55/381 (14%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W+K E  P    L  +   +GL C         V   + +    A   L A    
Sbjct: 24  PHYDQWEKAEMFP--RELWNKMGENGLLC---------VDVPEEYGGFGANFRLSA---- 68

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDW-APKIFSREYDPTNKA--PMQKTSVAIG-LGLTE 204
             ++    + A   AL +   VH D  AP I     +   +A  P   T  A+G +G+TE
Sbjct: 69  --VIVEEASRAGFGALASNISVHSDIVAPYILHLGNEEQKQAWLPKMVTGEAVGAIGMTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+  + ++  K  DG Y +SG K F+++    D  ++  + +   G   +     
Sbjct: 127 PGAGSDLQGMKTRADKDGDG-YSISGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPV 309
           D + +G    R   K+G+ +  T EL F N               F  L+ +L     P 
Sbjct: 186 DCALDGFARGRNLEKMGHHAADTSELFFENVKVGADQILGGEGKGFANLMNEL-----PR 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E    LI    AI +  GM   +   I Y + R   G  +      +  +AD+   +   
Sbjct: 241 ER---LILALGAIAACEGM---IERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVVN 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   +  + +D    RSE  A     A I K    ++   V  + ++  GG GY++E  
Sbjct: 295 RAYGEQCIDQYD----RSELTA---TNASIAKLTTTELQGVVADKCLQLFGGYGYMQEYP 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I+R Y ++    I  G+   M
Sbjct: 348 ISRDYVDARIQRIYGGTSEIM 368


>gi|325121806|gb|ADY81329.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 600

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 149/356 (41%), Gaps = 45/356 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+  I ++ +   +G Y + G K F+S+   D       I+LA++     G 
Sbjct: 166 LTESHAGSDLGLIRTKAEPNPNGSYSIMGEKIFISAGEHDLSENIIHIVLARLPQAPTGT 225

Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+  + +DG     N +    +++K+G   NAT  L F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++   +S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPQYPEKNADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407
            ++  +           AL++ LA   D  +S +++            + PI K +  + 
Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQQQQKHSDELLAFLTPIAKAFLTES 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458
                   ++  GG G+I E  + +  R++  +++  G+     LD+L          LL
Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465

Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  T+L +Q     + +  L    +K+  + +  +SL K     A+   E+I  AS
Sbjct: 466 KNMTDLIDQFIGQQQSNEVLKPYLEKLAELKQQWLSLTKTIADKAKHNPEEIGAAS 521


>gi|262376571|ref|ZP_06069800.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308710|gb|EEY89844.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 431

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 28/226 (12%)

Query: 224 GIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y + G K   L    +D +++ A ++GR   F+V R       +     +    +G +
Sbjct: 222 GHYLIRGQKTLVLLGESADLYLVSADLDGRAEVFVVQR-------DSTITAKKSPAMGLK 274

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           +  TV L+F NT  + LGD        ED     ++D   +    M V   EA+     +
Sbjct: 275 ATETVTLKFENTPAYRLGD--------EDFDYRAFVDLGNLMWCAMAVGTCEAVKKYCVQ 326

Query: 343 HVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           + +  I   +P+  R      IAD+A++I A   L    A+  +  ++   EA  AR++ 
Sbjct: 327 YANERIAFGEPISHRQSVAFMIADMAIEIDAMQMLILNAASLAESGQAFHREAYIARLL- 385

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 425


>gi|294626972|ref|ZP_06705562.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598634|gb|EFF42781.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 408

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 148 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 205

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 206 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 262

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 263 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 322

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 323 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 376

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 377 RDSRVHRILEGTNEVMRMIVARHLLNG 403


>gi|254480257|ref|ZP_05093505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039819|gb|EEB80478.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 589

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 30/323 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQG 218
           +AL   P +    A  I +   +   +  ++K +    +G   LTE   G+D+  + ++ 
Sbjct: 124 MALGLAPMLSSGAALAIHAHGTEAQKQTYLEKMNTGQWMGTMNLTESGAGSDLGVMKAKA 183

Query: 219 QKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQV----EGRVGC--FLVPRLL--EDG 265
               D  Y +SG K +++     S  +   ++LA++    EG  G   F+VP+ L  +DG
Sbjct: 184 VPEGD-HYRISGQKIYITWGDHQSTENIIHLVLAKLPDAPEGSRGISLFIVPKFLVNDDG 242

Query: 266 S---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
           S    N +     ++K+G   + T  + F +     G+LLG+ N     +  M       
Sbjct: 243 SLGERNDVYPVSCEHKLGIHGSPTCVMAFGDDEGAIGYLLGEKNRGLACMFTMMNEARHK 302

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLAN 378
             + ++     SL +A  YAR R V GG+ +I+ P +KR +  +     A   L++  A 
Sbjct: 303 VGVQALGASEGSLQKAAAYARDR-VQGGVPIIEHPDVKRMLLTMKSMCEAMRGLAYTEAV 361

Query: 379 SFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + D A     + R  + +   +M P+ K W  ++A  V +  ++  GG G++EE   A++
Sbjct: 362 TMDLAHRGPQEDRPLQQSRIDLMIPVIKGWLSEVAQEVTSLGLQVHGGMGFVEETGAAQY 421

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R+     I  G+      D+++
Sbjct: 422 LRDVRITPIYEGTNGIQAADLVS 444


>gi|326330373|ref|ZP_08196683.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325951910|gb|EGD43940.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 386

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 20/267 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           AP+          L+E+  G+D A++ ++   + DG  + LSG K W  ++ +SD + +L
Sbjct: 116 APLAAGKSTFSYALSEREAGSDTASMKTRA--VQDGDHWVLSGQKSWISNAGISDYYTVL 173

Query: 247 AQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A  +  GR G  +   ++E  S +G      + K+G + + T EL F   +  L GD  +
Sbjct: 174 AVTDPDGRRGSNISAFVVEK-SDDGFAIGAPEKKLGIKGSPTCELTFDAVY--LPGDRII 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
                     L  LD   ++++   V +A+     A  Y + R   G  + D   ++  +
Sbjct: 231 GEPGTGLQLALRTLDHTRITIAAQAVGIAQGALDHATDYVKERQQFGKRIADFQGIQFML 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ + AA  L +  A     AKS   +A+         K +    A  +  +A++ +
Sbjct: 291 ADMAMKLEAARQLVYVAA-----AKSE-RDASDLSFFGAAAKCFASDAAMEITVDAVQLL 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GGSGY ++  + R  R++    I  G+
Sbjct: 345 GGSGYTQDFPLERMMRDAKITQIYEGT 371


>gi|295394569|ref|ZP_06804789.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972579|gb|EFG48434.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 33/305 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S   A  +  + T    K W P + S E             +   + +TE   G+D+ A+
Sbjct: 96  STIVAHYINAIGTEEQKKRWLPGLASGE-------------LVGAIAMTEPGTGSDLQAV 142

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGL 270
            ++   +  G Y ++G K F+S+   +D  I++A+     G  G  L+   + D    G 
Sbjct: 143 KTKA-VLDGGEYVINGAKTFISNGTHADIVIIVARTNDQPGGKGLSLIVAEVND--LPGF 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
              R+ +K+G R   T EL F +       LLG +    G +  M+ L    L  A+  V
Sbjct: 200 SRGRVLDKVGQRGQDTRELFFEDMRVPAENLLGGVE-GKGFIHLMQQLPQERLALAVTGV 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +    ++   + YA+ R   G  ++     K  +A+ A D  AA      L +   E K 
Sbjct: 259 TTAEYAVRLTVDYAKEREAFGRPILGFQNTKFVLAECATDTFAARTFVDHLVSQHIEGKL 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +E+A+         KYW   +   VI   ++  GG GY+ E  IAR Y ++    I  G
Sbjct: 319 TTEQASAG-------KYWATDIQNTVIDRCVQVFGGYGYMLEYPIARMYADARVQKIYGG 371

Query: 446 SGNAM 450
           +   M
Sbjct: 372 TNEIM 376


>gi|85858067|ref|YP_460269.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721158|gb|ABC76101.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 414

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 35/271 (12%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
           +K+++      TE   G+D+ A+ ++  K  D  Y ++G K F+++  ++D   + A  +
Sbjct: 147 EKSTLMTAFAATEPGAGSDLLAMKTRAVKKGDK-YVINGQKCFITNGSVADILTVWAYTD 205

Query: 251 GRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
              G   +   ++E G+P GL Y   + K+G R     EL F +               F
Sbjct: 206 PSKGAKGMSTFVVERGTP-GLIYGHNEKKMGMRGCPNSELFFEDLEVPAENLVGEEGKGF 264

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +L+G L+++          ++  S  + ++  + +L  A+ + R R   G  +     +
Sbjct: 265 AYLMGALSINR---------VFCASQAVGIA--QGALERAMQHTREREQFGKPIAHLTPI 313

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+A ++ AA  L  R A +  +AK +        ++  + K +    A  V  +A
Sbjct: 314 QFMIADMATEVEAARLL-VRKATTLLDAKDKR-----GPLIGGMAKTFASDTAMKVTTDA 367

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GGSGY++E  + R  RE+    I  G+
Sbjct: 368 VQVMGGSGYMQEYQVERMMREAKLTQIYTGT 398


>gi|332976502|gb|EGK13345.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 606

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 52/343 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T+  +  LM   T      + PK+    +  T             + LTE + GT
Sbjct: 126 MYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTWSGT-------------MCLTEPQAGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+  + ++     DG Y L+G K F+SS   D       I+LA++    EG  G   F+V
Sbjct: 173 DLGQVKTKAVPQEDGTYKLNGTKIFISSGEHDLTDNIIHIVLARLPDAPEGTRGISLFIV 232

Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+       E G  NG+    +++K+G  S+AT  L F +  G+L+G+ +     +    
Sbjct: 233 PKFNVNEEGEAGERNGVSCGSIEHKMGIASSATCVLNFDDATGYLIGEPHRGLKAMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQPVMKRAIAD 361
               + + I  ++   ++   A+ YA+ R     +SG          +I+   ++R +  
Sbjct: 293 NTARIGTGIQGLAHCELAFQNALPYAKERRSMRTLSGVKEPEKVADAIINHADVRRMLLT 352

Query: 362 IALDIAAATALSF---RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412
           +        ++ +   R A+   +  +   +  + +         PI K +  ++     
Sbjct: 353 MKSFAEGGRSMIYHAARYADKMSQGIAEGNDEEFEKWDDKLGFYTPILKGFLTELGIEAA 412

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  +  GG GYI+E  +    R++   ++  G+     LD+L
Sbjct: 413 KEGQQVYGGHGYIKEWGMELIARDARIATLYEGTTGVQALDLL 455


>gi|328543528|ref|YP_004303637.1| acyl-CoA dehydrogenase family member 8 [polymorphum gilvum
           SL003B-26A1]
 gi|326413272|gb|ADZ70335.1| Acyl-CoA dehydrogenase family member 8 [Polymorphum gilvum
           SL003B-26A1]
          Length = 379

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGC 255
           LTE   G+D A++ ++   ++DG  Y L+G K F+S    SD ++++A+  G     + C
Sbjct: 124 LTEPGSGSDAASLRTRA--VADGDHYVLNGSKAFISGGGTSDVYVVMARTGGEGPKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +V    E G+P GL +   + K+G +S  T ++ F +     +   N+     E  +I 
Sbjct: 182 LVV----EKGTP-GLSFGAQEVKLGWKSQPTAQVNFEDC---RVPKANLVGTEGEGFRIA 233

Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L+    S+   +  L  A+ Y + R   G  L +   ++  +AD+A ++ AA
Sbjct: 234 MAGLDGGRLNIGACSLGAAQTCLERAVAYMKERRQFGRALAEFQALQFRLADMATELEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A   D   +++ EA     MA   K     +   V+ EA++  GG GY+ +  
Sbjct: 294 RLLLHKAAVLVD---AKAPEATRTAAMA---KRLATDVGFTVVNEALQMHGGYGYLRDYP 347

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           I R  R+   + IL G+   M L V
Sbjct: 348 IERFLRDVRVHQILEGTNEIMRLIV 372


>gi|325925092|ref|ZP_08186512.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325544508|gb|EGD15871.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 597

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 58/356 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +   DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+     DGS    N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVGRDGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y+R R     +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++     
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                G  LF     T    QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511


>gi|312200902|ref|YP_004020963.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311232238|gb|ADP85093.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 622

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 98/459 (21%), Positives = 191/459 (41%), Gaps = 84/459 (18%)

Query: 139 RLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           RL++ A L  G L +P   +  AS + L + P V    A   F+   D       +K + 
Sbjct: 94  RLFVPAHL--GGLGAPPTVAWAASELILGSNPAVFMYMAGPTFAGILDQLGTESQKKFAA 151

Query: 197 -------AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFI 244
                     + LTE   G+D+ A  ++  +  DG + + G K F++S     P +   +
Sbjct: 152 QAVERQWGATMVLTEPDAGSDVGAGRTRAVQQPDGTWHIEGVKRFITSGDWDIPENIFHM 211

Query: 245 MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+ EG       +  F+VP+ + D      G+ NG+    +++K+G + +AT EL F 
Sbjct: 212 VLARPEGHGPGTKGLSMFIVPKFMPDPETGAPGARNGVYVTNVEHKMGLKVSATTELRFG 271

Query: 293 N---TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                 G+L+GD++         +E  ++++       +++ +      A+ +AR R V 
Sbjct: 272 EKTPAVGWLVGDVHDGIAQMFQVIEHARMMV----GTKAIATLSTGYLNALEFARTR-VQ 326

Query: 346 GG------------ILIDQPVMKRAI-----------------ADIALDIAAATA----L 372
           G              +I  P ++R +                 A     +AAA +     
Sbjct: 327 GADLAATDKGAPRVTIIHHPDVRRMLMAQKAYAEGMRALVLYTASFQDTVAAAESEGGVP 386

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R A S  +  +    A    ++ PI K    + +  ++A +++  GGSGY+++  + +
Sbjct: 387 GSRAALSGADGSAAERAARMNDLLLPIVKGVGSERSYELLASSLQIFGGSGYLQDYPVEQ 446

Query: 433 HYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + R++  +++  G+ +    D+     + ++G  L   L        G +G   +   RD
Sbjct: 447 YIRDAKIDTLYEGTTSIQGQDLFFRKIVRDQGQALTALLIDIQAFAKGDAGNGTLAKERD 506

Query: 490 SISLCKED-----KGLARFLTEKIALASSAAALYRAGMN 523
            ++   ED       L  FLT   + A +   +Y+ G+N
Sbjct: 507 QLAAALEDVQSMVGALVGFLT---SAAENRDEVYKVGLN 542


>gi|255941758|ref|XP_002561648.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586271|emb|CAP94019.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 436

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 35/301 (11%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYC 227
           +  + W PK+               T+  +G   L+E   G+D  A+ ++ +K +DG Y 
Sbjct: 158 KAQRTWLPKL---------------TTGTVGSFCLSEPASGSDAFALQTKAEKTADG-YK 201

Query: 228 LSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L+G K W  +S  +  FI+ A ++   G   +   + +    G    + + K+G R+++T
Sbjct: 202 LNGSKMWITNSMEAGVFIVFANIDPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIRASST 261

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA- 339
             L F +    ++   N+     +  K  I  L+   + ++     LA      A  Y  
Sbjct: 262 CVLNFDDC---VIPKSNLLGEEGQGYKYAISVLNEGRIGIAAQMTGLALGAWENAARYVW 318

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G ++ +   M+  IA    +IAAA AL +  A   +  +   ++AA A++    
Sbjct: 319 NDRRQFGELIGNFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL---- 374

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  ++A  V + A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+
Sbjct: 375 ---YASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQ 431

Query: 460 K 460
           K
Sbjct: 432 K 432


>gi|332667946|ref|YP_004450734.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336760|gb|AEE53861.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 598

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 49/290 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  A  ++    +DG  Y  +G K W  ++  +D FI+ A+++G +   F+V
Sbjct: 151 LTEPGSGSDALAAKTRADLSADGKNYLFNGQKMWISNAGFADLFIVFAKIDGDKFTGFIV 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI-- 314
            R        GL     + K+G + ++T ++ F NT             PVE++  KI  
Sbjct: 211 ER-----DSAGLTLGAEEKKLGIKGSSTRQVFFENT-----------PVPVENVLGKIGK 254

Query: 315 --LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             LI  ++          +S+ G + S+  AI YA  R   G  +     ++  +A+ A+
Sbjct: 255 GHLIAFNALNTGRFKLCALSLGGAKYSVTTAIRYANERIQFGVPISSFGAIQYKLAEQAI 314

Query: 365 DIAAATALSFRLAN--------------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            I +  +  FR++N              SF EA+ ++ E  YA I   I K    +    
Sbjct: 315 RIFSTESALFRVSNLMELKKQEFEANGASFGEAELKAAEE-YA-IECSILKVTGSEALDY 372

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V+ E ++  GG G+ EE + AR YR++  N I  G+     L  +++L K
Sbjct: 373 VVDETLQVHGGMGFSEEGTAARAYRDARINRIYEGTNEINRLLSIDMLLK 422


>gi|289662786|ref|ZP_06484367.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 191 FVVPADAPGITYGRKEEKMGWNSQPTRGVTFENV---RIPAENLLGKEGEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|226355964|ref|YP_002785704.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317954|gb|ACO45950.1| putative Acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 388

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           LTE   G+D A++  + ++  D  + L+G K W  S   +D ++++A+        V CF
Sbjct: 132 LTENSAGSDAASLRLRAERDGDS-WVLNGSKSWITSGGQADTYLVMARTGESGAKGVSCF 190

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           +V    E+G+P GL + + + K+G  ++ T  + F    G  +   N+     + + I L
Sbjct: 191 IV----ENGTP-GLSFGKPEEKLGLHASHTTTVNFE---GVRVSQENMVGAEGQGLIIAL 242

Query: 316 IYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS     A+ ++   R ++  A  YA  R   G  L +   +   IA +A  I +  
Sbjct: 243 ASLDSGRIGIAMQALGIARAAMEHATRYANEREQFGKKLREFEGVSFKIARMAARIESTR 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+  +  +EA+ A+++A  T       A  V  +A++  GG+GY  E  +
Sbjct: 303 LIALKAAWLKDQGLAFGKEASIAKLLASET-------AVDVTRDAIQVFGGNGYSREYPV 355

Query: 431 ARHYRESPANSILLGS 446
            R YR++    I  G+
Sbjct: 356 ERLYRDAKVTEIYEGT 371


>gi|159043390|ref|YP_001532184.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911150|gb|ABV92583.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 382

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 132/325 (40%), Gaps = 35/325 (10%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           I  AR  L A   AGH +   + +  ++A  +  +  K W PK+ S E            
Sbjct: 76  IEIARANLSA-WGAGHGIHSGIVAHYILAYGSEEQKQK-WLPKMVSGE------------ 121

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---- 250
            +   L +TE   G+D+  I ++  K  +G Y LSG K F+++      I++A       
Sbjct: 122 -MVGALAMTEPGAGSDLQGIKTRAVKDGNG-YRLSGSKIFITNGQHANLIVVAAKTDPSA 179

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
           G  G  LV  +LE     G    R  +K+G  ++ T EL F N       LLG   V  G
Sbjct: 180 GAKGVSLV--VLETEGAEGFSRGRNLHKVGMHASDTSELFFDNVAIPPENLLGG-EVGKG 236

Query: 308 PVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M  L    L  A  +V  M  ++   + YA+ R   GG ++     +  +A+    
Sbjct: 237 FYQMMTQLPQERLIIAAGAVGAMEGAVERTVAYAKERQAFGGPILQFQNTRFKLAECQTK 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              A A          E K   E+AA A       KYW       VI E ++  GG GY+
Sbjct: 297 TTVARAFLNECMAEHLEGKLSVEKAAMA-------KYWITDTQGEVIDECVQLHGGYGYM 349

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IA+ + ++    I  G+   M
Sbjct: 350 AEYDIAQMWSDARVQRIYGGTNEIM 374


>gi|118444538|ref|YP_878944.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(butyryl-CoA
           dehydrogenase) [Clostridium novyi NT]
 gi|118134994|gb|ABK62038.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(Butyryl-CoA
           dehydrogenase) [Clostridium novyi NT]
          Length = 379

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F+++  ++D FI  A  +   G   +
Sbjct: 123 FGLTEPNAGTDASGQQTVAVKQGDK-YILNGQKIFITNGGVADVFIAFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    G    ++++K+G R+++T EL F         D  V   P E++      
Sbjct: 182 SAFIVEKGFKGFSIGKVEDKLGIRASSTTELIFE--------DCEV---PAENLIGKEGK 230

Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + VS   + +A     EAI Y + R   G  L     M    A+   
Sbjct: 231 GFAIAMKTLDGGRIGVSAQALGIAEGALEEAIEYMKERKQFGKQLYKFQGMGWMAAECKA 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L ++ A +    K  + EAA A++ A  T       A  V  +A++  GG GY
Sbjct: 291 KIEAARYLVYKAAYNKMTGKPYTVEAATAKLFAADT-------AMEVATKAVQMFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 344 TKDYPVERMFRDAKITEIYEGT 365


>gi|260549383|ref|ZP_05823602.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260407492|gb|EEX00966.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 378

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGD-YWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|171060266|ref|YP_001792615.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170777711|gb|ACB35850.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 593

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 151/333 (45%), Gaps = 48/333 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ + E+  T             + LTE + G+D++A+ S+     D  Y +SG K F+
Sbjct: 151 PKMVAGEWTGT-------------MNLTEPQAGSDLSAVRSRAVPEGDH-YRVSGTKIFI 196

Query: 236 SSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278
           +    D       ++LA+       V+G +  F+ P+ L  +DGS    N L    +++K
Sbjct: 197 TWGEHDLAENIVHLVLARLPEAPAGVKG-ISLFVCPKFLVNDDGSLGARNDLVCASIEHK 255

Query: 279 IGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVS 331
           +G  ++ T  + F       G+L+G+ +   G +  M    ++ + L+   +S    + +
Sbjct: 256 LGIHASPTAVMSFGEGPGAIGYLVGEPHKGLGYMFTMMNHARLNVGLEGVGISERAYQHA 315

Query: 332 LAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-- 388
            A A+   + R ++G   +I  P ++R + D+     A  AL++  A   D A + ++  
Sbjct: 316 RAYALDRVQGRTLTGSKTIIGHPDVRRMLLDMKARTEAMRALAYYAAGQMDRAHAHADAD 375

Query: 389 ----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                 A   ++ P+ K WC + A  + ++ ++  GG G++EE   A++ R++   +I  
Sbjct: 376 ARARSQALVELLTPVVKGWCTENALGIASDGVQVHGGMGFVEETGAAQYLRDARITTIYE 435

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
           G+      D++   L  +G      L + +  D
Sbjct: 436 GTTGIQANDLIGRKLAREGGVTMRALIAQMRSD 468


>gi|93006363|ref|YP_580800.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92394041|gb|ABE75316.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 383

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 29/291 (9%)

Query: 175 APKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP I     +   KA  P   T  ++G + +TE   G+D+ AI +   K  D  Y ++G 
Sbjct: 99  APYILKHGTEEQKKAWLPKLATGESVGAIAMTEPTTGSDLQAIKTYAVKDGDD-YIINGS 157

Query: 232 KWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           K F+++      I+LA    + +G  G  L+  ++E  +  G    R   K G  S  T 
Sbjct: 158 KTFITNGQHTNLIVLACKTDRDQGAQGVSLI--VVETDALEGFSRGRNLKKTGLSSQDTS 215

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-----DSAIMSVSG---MRVSLAEAIHYA 339
           EL FSN     +   NV  G VE +  +  +     +  I+++SG   ++++L   + Y 
Sbjct: 216 ELFFSNV---RVPQKNV-LGGVEGLGFIQMMQELPQERLIIALSGCGAIKLALELTLEYV 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +      +  +A++  D  A  AL        D A             A +
Sbjct: 272 KEREAFGKSIWKFQNTRFKLAEVQADYLAVKALC-------DSAVEAMINGTLTAPQASL 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            KYW  +    V+ E ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 325 IKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIM 375


>gi|330873878|gb|EGH08027.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 600

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFI 244
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  A +
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIAHL 211

Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+       V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPSGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L      + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|313499664|gb|ADR61030.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 375

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 170 TDPEAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLG 224

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 E  KI L  L+   + ++   V +A A       YA  R   G  LI+   +  
Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I+ A  +    A   D  +        A + A + K +  +MA  V ++A++
Sbjct: 282 RLADMATKISVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+ +  + R YR+     I  G+ +
Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|225628681|ref|ZP_03786715.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254699511|ref|ZP_05161339.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254706235|ref|ZP_05168063.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254711472|ref|ZP_05173283.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256029898|ref|ZP_05443512.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256158067|ref|ZP_05455985.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256252978|ref|ZP_05458514.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167001|ref|ZP_05753812.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261220071|ref|ZP_05934352.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261313676|ref|ZP_05952873.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261319081|ref|ZP_05958278.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261749966|ref|ZP_05993675.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261756388|ref|ZP_06000097.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986915|ref|ZP_06099472.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265996581|ref|ZP_06109138.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|306845537|ref|ZP_07478106.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|225616527|gb|EEH13575.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|260918655|gb|EEX85308.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261298304|gb|EEY01801.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261302702|gb|EEY06199.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736372|gb|EEY24368.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261739719|gb|EEY27645.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|262550878|gb|EEZ07039.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264659112|gb|EEZ29373.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|306273858|gb|EFM55685.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|170702516|ref|ZP_02893395.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132583|gb|EDT01032.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D   + ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               LL +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|153004999|ref|YP_001379324.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028572|gb|ABS26340.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 382

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 121/266 (45%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P+     A G  GL+E + G+D A++ ++  +  D ++ L G K W  S  ++   ++ A
Sbjct: 112 PLASGEWAAGAFGLSEPQAGSDAASMRTRAVRRGD-VWVLDGEKQWITSGDVAGVIVVWA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300
           + +   G   V   L +    GL   R + K+G R+++TV L         +   G    
Sbjct: 171 KTDPEAGTRGVTAFLVERDAPGLVVGRHEEKMGIRASSTVSLALDGCEVPEAQRLGPEGE 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++   ++  ++ I    A  +   +R +L  +  YA+ RH  G  + +   +   +A
Sbjct: 231 GFRIALAALDGGRVGI----AAQATGTIRAALDASRRYAKERHAFGRPIAEHQAVAFMLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A D  A+  ++ R A   +     + EAA A+++A        + A   ++ A++  G
Sbjct: 287 DMATDHEASRLMTLRAAALKEAGAPFAREAAMAKLLA-------SEAAQRAVSRAVQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  + S+ + +R++   ++  G+
Sbjct: 340 GYGYTSDYSVEKLFRDARVQTLYEGT 365


>gi|220917381|ref|YP_002492685.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955235|gb|ACL65619.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 380

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 36/278 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253
             LTE   G+D A + +   +  D  Y L G K F+++ P +DA ++ A  +       +
Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181

Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLN 303
             FLVP   R    G P+        +K+G R++ +  L F        +  G       
Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCAIPARHRLGEEGDGFK 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G ++  +I I    A  ++     +  EA+ YA+ R   G  +     ++  +AD+A
Sbjct: 234 IAMGTLDGGRIGI----AGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L  R A++ D     S E+A A++ A        +M+  V ++A++  GG G
Sbjct: 290 TEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y++E  + RH+R+S    I  G+     L +   + KG
Sbjct: 343 YVKEFDVERHWRDSRITEIYEGTSEIQRLVISASVLKG 380


>gi|39935374|ref|NP_947650.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649226|emb|CAE27746.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 375

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + +  ++  D  Y ++G K F++S  +   I+L  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R+++K+G  S+ T +L F++    +  DL +     E +
Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAA  +    A+  +       EA+ A++ A  T       A AV + A++ +GG GY++
Sbjct: 291 AAARQMVLYAASLREAGLPCLTEASMAKLFASET-------AEAVCSSAIQTLGGYGYLK 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +  + R YR+     I  G+ +
Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365


>gi|90422551|ref|YP_530921.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104565|gb|ABD86602.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 396

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D   + S+ +K+ DG Y LSG K W  +
Sbjct: 118 FGNEATRQKYLPKLATGEWIGCFGLTEPDHGSDPGGMISRARKV-DGGYRLSGAKMWITN 176

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G P GL    +  K+G R++ T E+   + F
Sbjct: 177 SPIADVFVVWAKDDAGEIRGF----VLEKGWP-GLSAPAIHGKVGLRASITGEIVLDDVF 231

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 232 CPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEDCYLRARQYVLDRKQFGR 285

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  
Sbjct: 286 PLATNQLVQKKLADMLTEITLGLQGCLRLGRLKDEGAAPVE-------ITSIMKRNSCGK 338

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 339 ALEIARAARDMMGGNGISDEFGVARH 364


>gi|158315718|ref|YP_001508226.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111123|gb|ABW13320.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 385

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 22/247 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE+  G+D A + +  ++  D  + ++G K F++ +P++D F++ A+ + G  G   + 
Sbjct: 122 LTEENAGSDPAGLATSARRDGD-EWVINGAKRFITNAPLADVFMVFARTDPGAEGGHGIT 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKIL 315
             + +    GL      +K+G     T ++  ++        + G+  V  G    M+ L
Sbjct: 181 AFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL 240

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +     + ++ + V LA     E++ YA  R   GG++    +++  +AD A D+ AA 
Sbjct: 241 AH---GRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL   +A  FD+           RI     KY+  +    V   A++  GG+GY+    +
Sbjct: 298 ALVLDVAARFDDGSD-------TRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPV 350

Query: 431 ARHYRES 437
            R YR++
Sbjct: 351 ERFYRDA 357


>gi|294664870|ref|ZP_06730189.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605362|gb|EFF48694.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|21242066|ref|NP_641648.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107471|gb|AAM36184.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 21/274 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RVPAENLLGKEGEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           R+S  + IL G+   M + V   L  G    EQL
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNGE---EQL 392


>gi|260557138|ref|ZP_05829354.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|260409244|gb|EEX02546.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
          Length = 593

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 164/405 (40%), Gaps = 55/405 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365
              I  +     +   A  YA    + R  +G          IL+   V +R + ++  +
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSATGVQSPSKPADSILVHGDV-RRMLLNVRAN 356

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
                +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521


>gi|87200121|ref|YP_497378.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135802|gb|ABD26544.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 600

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 138/339 (40%), Gaps = 49/339 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P + + ++ A+    +P     + P++ + E+  T             + LTE   GT
Sbjct: 126 MYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLGT-------------MNLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++ +   DG Y ++G K F+S+   D       ++LA+  G       +  F+V
Sbjct: 173 DLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIV 232

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ +  +DGS    N +    ++ K+G   NAT  + +    G+++G+ N     +  M 
Sbjct: 233 PKFIVNDDGSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGI--------LIDQPVMKRAIAD 361
               L   +  ++   V+    + YA  RR  R ++G          +I  P ++R + D
Sbjct: 293 NAARLGVGMQGLAQAEVAYQNGLAYALDRRQGRALTGPADPQAKADPIIVHPDVRRMLMD 352

Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
               +    AL    A   D        + R E      ++ P+ K +   M   V  + 
Sbjct: 353 GKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYGTDMGYKVATDM 412

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +  GG GYI E  + +  R++    I  G+     +D+
Sbjct: 413 QQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDL 451


>gi|325919178|ref|ZP_08181233.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325550348|gb|EGD21147.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 597

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D        + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVTHRGETEQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++ 
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454


>gi|240143298|ref|ZP_04741899.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
 gi|257204776|gb|EEV03061.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
 gi|291536834|emb|CBL09946.1| Acyl-CoA dehydrogenases [Roseburia intestinalis M50/1]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 27/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251
             LTE   GTD  A  +Q + + DG  + L+G K F+++  ++D +I++A         G
Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R        +++ G+P G  +   + K+G R ++T EL F +     +   N+     + 
Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236

Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             I ++ LD   + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  
Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAAR 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L ++ A +    K  S EAA A++ A  T       A AV  E ++  GG GYI
Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYGYI 349

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++    I  G+
Sbjct: 350 REYDVERMMRDAKITEIYEGT 370


>gi|188586496|ref|YP_001918041.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351183|gb|ACB85453.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 379

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  +  ++ + + D  Y ++G K F+++   +D +I+ A  E   G   +
Sbjct: 123 FGLTEPNAGSDAGSQETRAE-LKDDHYLINGTKIFITNGDEADTYIVFAMTEPDKGVKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + D    G    + + K+G + +AT EL F N     +   N+     +  KI +  
Sbjct: 182 SAFIVDRDTPGFSVGKREKKMGIKGSATTELIFEN---MKVPKENLLGKEGQGFKIAMKT 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + V+   + +A     E ++Y + R      +     ++  +AD++  + AA  L
Sbjct: 239 LDGGRIGVAAQALGIAQGALDETVNYTKEREQFNRPIAKFQGLQFEMADMSTQVEAARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A +  + K  ++EAA A++       +  ++A  V  +A++  GG GY ++  + R
Sbjct: 299 VYRAAMAKAQGKPYTKEAAMAKL-------YASEVAMHVANKAIQLHGGYGYTKDYPVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MLRDAKITEIYEGT 365


>gi|23499979|ref|NP_699419.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161620297|ref|YP_001594183.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260568457|ref|ZP_05838926.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|23463561|gb|AAN33424.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161337108|gb|ABX63412.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260155122|gb|EEW90203.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|54025518|ref|YP_119760.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017026|dbj|BAD58396.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 380

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+  +   +  G Y + G K W     ++D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALACKATAVEGG-YRIDGTKAWITHGGVADFYTLFARTGEGSRGVSCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V     D    GL + + + K+G  +  T    + N F  L  +  +             
Sbjct: 186 V-----DKDTEGLSFGKPEEKMGLTAVPTTSAHYDNAF--LPAERRIGAEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V LA     EA+ YA+ R   G  +ID   +   +AD+A  + +A   
Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYAQERTAFGRKIIDHQGLGFLLADMAAAVDSAR-- 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++  GG GY  +  + R
Sbjct: 297 ----ATYLDAARRRDAGLPYSR-QASVAKLVATDAAMKVTTDAVQVFGGYGYTRDFRVER 351

Query: 433 HYRESPANSILLGS 446
             RE+    I  G+
Sbjct: 352 FMREAKITQIFEGT 365


>gi|331017847|gb|EGH97903.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++G+ +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRGRSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|229491809|ref|ZP_04385630.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229321490|gb|EEN87290.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-------QVEG 251
           + +TE   G+D+A I +  +   DG  Y L+G K F++   +    ++A       + + 
Sbjct: 124 IAMTEPGTGSDLAGIKTTARLSEDGTHYILNGAKTFITGARNSELCVVAARTSAPSEEDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L   L+      G  + R  +KIG +S+ T EL F+        D+ V   PVE+
Sbjct: 184 RFGLSL---LVVPTDSVGFNFGRKLDKIGMKSSDTNELSFT--------DVRV---PVEN 229

Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     K   YL            +   +    ++  A  Y R+R V G  +      K 
Sbjct: 230 LLGEQDKGFSYLGQNLPRERLSIGVGQTACAAAAIEFASEYVRQRQVFGKPVASFQNTKF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A+ A ++AAA AL+ +  +  D  +  + +AA  RI     K +C +MA  VI + ++
Sbjct: 290 VLAECATEVAAAQALADKGLDLDDSGELTAADAA--RI-----KLFCTEMAGRVIDKCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GYI E  IAR Y ++  + I  G+   M
Sbjct: 343 LHGGYGYILEYPIARLYADTRVSRIYGGTSEVM 375


>gi|195353562|ref|XP_002043273.1| GM26869 [Drosophila sechellia]
 gi|194127387|gb|EDW49430.1| GM26869 [Drosophila sechellia]
          Length = 405

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 118/258 (45%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VG 254
             L+E   G+D  A ++      D         W  ++  ++A I+ A    +     + 
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDHFVVNGTKAWITNAFEAEAAIVFATTNKQLKHKGIS 204

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+VP+     +  G    + ++K+G R ++T +L F +    ++   N+   P    KI
Sbjct: 205 AFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKI 256

Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD+  + ++   + + +A     + YA++R   G  +     +++ IAD++L + +
Sbjct: 257 AMQTLDAGRIGIASQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMES 316

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R A   D+ +  ++EAA A++ A      C         + ++ +GG GY+ + 
Sbjct: 317 ARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTDM 369

Query: 429 SIARHYRESPANSILLGS 446
           +  RHYR++    I  G+
Sbjct: 370 AAERHYRDARITEIYEGT 387


>gi|156324146|ref|XP_001618465.1| hypothetical protein NEMVEDRAFT_v1g154495 [Nematostella vectensis]
 gi|156199014|gb|EDO26365.1| predicted protein [Nematostella vectensis]
          Length = 269

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   K  D  Y ++G K F+++ + +D +++ A+ +  +G   +
Sbjct: 4   LCITEPFGGSDVAGMRTTAIKKGDK-YIINGSKTFITNGVYADYYVVAAKTDPELGNKGI 62

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              L D S  G+   +L +K+G R++ T E+ F N   +   L+G+       +     L
Sbjct: 63  SIFLMDSSSKGVSATKL-DKLGWRASDTAEIAFDNVEISQENLMGEEGKGFPYIMQHFAL 121

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  AI + +    ++   I Y  +R   G  +     ++  I + A D+      ++ 
Sbjct: 122 ERLIMAINAHARAEYAIEYTIEYMSQREAFGKTINKFQALRHTIVEHATDVEHCKLFNYA 181

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D+ +   +EA  A++ +        K+A   I   ++ +GG GY+EE  +AR  R
Sbjct: 182 AVARLDKGEYVVKEATMAKLKS-------TKVADETIYSCLQMLGGYGYMEEYPLARLLR 234

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 235 DSRLGPI--GGGTSEIL 249


>gi|108756791|ref|YP_631977.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460671|gb|ABF85856.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 381

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--G 251
           ++A    L+E   G+D  A+ +   +  D ++ L+G K W  S   +   ++ A+    G
Sbjct: 118 AIAGSFALSEPHAGSDPGALRTTAVRRGD-VWVLNGSKQWITSGAYAGVMVVWARTSPAG 176

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             G  CF+V     +G   GL   + ++K+G RS+ TV L F +     +   N+     
Sbjct: 177 NKGLSCFIV-----EGGTKGLIIGKHEDKMGLRSSNTVSLTFEDC---EVPAENLLGAEG 228

Query: 310 EDMKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K+ ++ LD   + ++       R +L   + Y + R   G  + +    +  +AD+ 
Sbjct: 229 QGFKLAMVALDGGRIGIAAQACGVGRAALEATVAYVKDRQAFGQPIGEFQGPRFMLADMQ 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L+ R A+  ++ +  S EA+ A++ A        +M+  V  +A++  GG G
Sbjct: 289 TQLEAAELLTLRAASMKEKGQPFSREASMAKLFA-------SEMSNKVADKAVQLHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI+E  + R +R++   +I  G+
Sbjct: 342 YIDEFPVERFFRDARVQTIYEGT 364


>gi|119714538|ref|YP_921503.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535199|gb|ABL79816.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 381

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 37/336 (11%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  F  V+ ++ +K+ AA       L +   +   +T+  +V L T  +  + W P + +
Sbjct: 67  DYRFNAVLLEELNKVNAA-------LGSCVGIHADITAPYLVELGTDEQKQR-WLPGVAA 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V + +G+TE  GG+D+AA+ +   K  D  + ++G K F+++  S
Sbjct: 119 GE-------------VLLAIGMTEPSGGSDLAALKTTAVKDGDS-WVINGSKTFITNGYS 164

Query: 241 -DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296
            D  ++ A+         +     + +  G    R  +KIG   + T EL F N   T  
Sbjct: 165 ADLVLVAARTSPEKKARGITLFAVESTAPGYSRGRKLDKIGQDESDTAELFFENVRVTDA 224

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            ++G+L+   G +  M+ L    L  AI +V+  +  L E + YA+ R   G  +     
Sbjct: 225 EIVGELD--GGFIHMMQKLPQERLGCAISNVAHAKQILLETLQYAKDRKAFGQGIGSFQY 282

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +A++   I    A         D+            I A   K+W  ++   V+  
Sbjct: 283 NKFLLAELFTRIEVTEAF-------IDQCVVAHAAGELTPIDAAKAKWWSSQVQNEVLDH 335

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  +AR +R++  + I  GS   M
Sbjct: 336 CVQLHGGYGYMNEYRVARAWRDARVSKIWAGSNEIM 371


>gi|312221598|emb|CBY01538.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 438

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 31/261 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH- 231
           W P +F+ E           TS A  LG+TE  GG+D+A I +   K  DG  Y ++G+ 
Sbjct: 151 WLPGLFTWE-----------TSFA--LGITEPSGGSDVANIETTATKSPDGTHYIVNGYK 197

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-VELE 290
           KW    P +   +  A   G  G   +  L+   S  GL ++R+ N   N   A+ VEL+
Sbjct: 198 KWITGMPWA-THMTTAVRTGGPGMTGISVLVIPTSSRGLTHRRIANSGQNSGGASFVELD 256

Query: 291 -FSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVS---GMRVSLAEAIHYARRRH 343
                 G LLG+ N      +  +I++     +  +MS+      R  L+E+  YA  RH
Sbjct: 257 NVQVPVGNLLGEEN------KGFRIIMKNFNKERFLMSIGCNRKARTCLSESTAYAHTRH 310

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L+   ++   +A +A  I +  A   +LA    +++   ++A  A  +A +TK  
Sbjct: 311 TFGKPLVSNQIIAHKLATMARYIESHWAWLEQLAYHIQQSRDGWQDAEIAGQIA-LTKVH 369

Query: 404 CCKMAPAVIAEAMECIGGSGY 424
             ++      EA +  GG+GY
Sbjct: 370 GGRILEMANREAQQIFGGAGY 390


>gi|300790236|ref|YP_003770527.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799750|gb|ADJ50125.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 378

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 28/255 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E + G+D AA++++  ++    Y ++G K W   + ++D +  +     R G   +  
Sbjct: 127 LSETQAGSDAAALSTRA-RLDGPDYVVNGTKAWITHAGVADFYTTMV----RTGPDEISC 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
           LL DG+  GL     + K+G   + T ++ F N       LLG       P   ++I L 
Sbjct: 182 LLVDGATEGLSAAPRERKMGLTGSPTAQMIFENARVPAERLLG------APGAGLRIALS 235

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L S  + ++   V LA     EA+ YA+ R   G  +ID   ++  +AD+A  + A+ A
Sbjct: 236 SLSSGRLGIAACAVGLAQAALDEAVAYAKGRSQFGRPIIDFQGVEFLLADMAATVEASRA 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L        D A+ R     + R  A I K      A  V  +A++ +GG+GY  +  + 
Sbjct: 296 L------YLDAARRRDRGMPFNR-QASIAKLVATDGAMKVTTDAVQVLGGAGYTRDFPVE 348

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I  G+
Sbjct: 349 RYMREAKVPQIFEGT 363


>gi|218515203|ref|ZP_03512043.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ +K+ DG Y L+G K W  ++P++D F++ A+ E G +  F 
Sbjct: 138 FGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGF- 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              +LE G   GL    +  K+G R++ T E+     F   + + N+  G          
Sbjct: 196 ---ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTC 248

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A +I+     
Sbjct: 249 LNSARFGIAWGALGAAEDCYARARQYTLERKQFGRSLAANQLIQKKLADMAAEISLGLQG 308

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL    +E     E       +  I K   C  A  +   A + +GG+G  +E  IAR
Sbjct: 309 CLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361

Query: 433 H 433
           H
Sbjct: 362 H 362


>gi|166712845|ref|ZP_02244052.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
                   G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 191 FAVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|126666886|ref|ZP_01737862.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628602|gb|EAZ99223.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 448

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 133/315 (42%), Gaps = 38/315 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+ +A I +     + G Y + G K ++S    +       ++LA+++G   
Sbjct: 10  MALTEPHAGSSLADIRTSATPDNAGHYLIKGAKIYISGGEQNITENIVHMVLAKIKGAPA 69

Query: 253 ----VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+L        G  NG+    L +K+G R   +  L F +     G+L+G
Sbjct: 70  GVKGISLFIVPKLRLSETGGSGERNGVALAGLIHKLGYRGTTSTALSFGDDAECHGYLVG 129

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQ-PV 354
           +    L      + + ++ +   +A++   G   SLA A    + RR        +Q P+
Sbjct: 130 EPHQGLKYMFQMMNEARVGVGCGAAVIGYRGYMHSLAYAKDRLQGRRAADNNPQSEQVPI 189

Query: 355 M-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           +           ++A ++  L +    A      N+  E + R E      ++ P+ K W
Sbjct: 190 IEHADVRRMLLAQKAYSEGGLALCLYGARLMDDQNTHPEPQKRQEAGQLLDLLTPVIKAW 249

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
             +  P     A++  GG+GY  E  + + +R++  N I  G+     LD+L   + +  
Sbjct: 250 PSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKVWQNQ 309

Query: 462 TNLFEQLFSTLEQDL 476
           ++  + L   ++ DL
Sbjct: 310 SHGLQLLLDAMQADL 324


>gi|167621911|ref|YP_001676696.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167351652|gb|ABZ74382.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 590

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 46/313 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +   +G + L+G K F++S   D       ++LA++ G     
Sbjct: 163 LTESHAGTDLGLIRTRAEPDGEGAFRLTGGKIFITSGEHDLVENIVHLVLARLPGAPAGV 222

Query: 253 --VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             +  F+VP+ +    P+G   +R       +++K+G +++AT  + F    G L+G  +
Sbjct: 223 KGISLFVVPKFIP--RPDGALGERNAVTCGAIEHKMGLKASATCAMNFDGAVGRLVGQPH 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR------------HVSGGI 348
                ++ M  ++  +  ++S  G  V+      A  YAR R                  
Sbjct: 281 RG---LQAMFTMMNAERLLLSAQGQGVAETAYQSAAAYARDRLQGRAPGDHGEASAHADP 337

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKY 402
           +I  P ++R +  +        AL   +  + D A       +R+   A   +M PI K 
Sbjct: 338 IIVHPDVRRMLLTMRAHAEGGRALGLWVMRALDVAARDPDPDARASANALVALMTPIVKV 397

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           W    A       ++ +GG G+I E  + +  R++    +  G+     LD++   L  +
Sbjct: 398 WLSDTASETANLGIQVMGGHGFIREWGMEQLVRDARILQLYEGANGIQALDLVARKLPME 457

Query: 461 GTNLFEQLFSTLE 473
              L ++L + +E
Sbjct: 458 NGRLLDRLTAPIE 470


>gi|120401921|ref|YP_951750.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954739|gb|ABM11744.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 30/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + ++E   G+D+A I +   +  D  + L+G K F+S+ + SD  I++A+ +   G  G 
Sbjct: 124 IAMSEPGAGSDLAGIRTTAVRAGDD-WILNGSKTFISAGINSDLVIVVARTDPDAGHKGF 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VST 306
            L+  ++E G P G    R  +K+G  +  T EL F++       LLG+ N      ++ 
Sbjct: 183 SLL--VVERGMP-GFERGRKLDKMGQPAQDTAELHFTDVRVPATNLLGEQNRGFYHLMAN 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I      AI +V+G R +  + + YA+ R   G  +      +  +A++  ++
Sbjct: 240 LPSERLSI------AIAAVAGARETYRQTLQYAKDRTAFGQSIGSFQHNRFVLAELDTEL 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R   +  +    + +AA A       K+WC ++A  V+   ++  GG GY+ 
Sbjct: 294 DIAEQYVDRCLQALLDQDFSAVDAAKA-------KWWCTELAKRVVDACLQLHGGYGYMN 346

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  +A+ Y ++   +I  G+   M
Sbjct: 347 EYKVAKDYVDTRIQTIYGGTTEIM 370


>gi|83644527|ref|YP_432962.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83632570|gb|ABC28537.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 599

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  + ++ + + DG Y ++G K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGSDLGLLKTKAEPLPDGAYAITGTKIFISAGDHDLSDNIVHVVLARLPDAPAGT 223

Query: 253 --VGCFLVPRL-LEDG----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + DG    +PN L    L++K+G + +AT  + F    G+L+G+ N  
Sbjct: 224 KGISLFIVPKFNVSDGGEITTPNSLSCGSLEHKMGIKGSATCVMNFDGARGYLIGEPNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353
              +        +   +  ++    +   AI YAR     R + G +  D+P        
Sbjct: 284 LNCMFTFMNAARVGVGLEGLAATEAAFQGAISYARDRLQMRSLKGPVNKDKPADPIIVHP 343

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 + ++AI +    +A        L    ++A  ++   A   ++ PI K +  + 
Sbjct: 344 DVRRMLLTQKAIREGGRALAMYCTQQIDLTLYSEDADVKAAAEAKLALLTPIVKAFLTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A    +  M+  GG G+I+E  + +  R++   ++  G+     +D+L
Sbjct: 404 AQECASYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLL 451


>gi|45658958|ref|YP_003044.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602203|gb|AAS71681.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 595

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 72/369 (19%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P+I + +Y             +  + LTE   G+D+  + ++  + ++GI+ ++G 
Sbjct: 179 EKWIPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDANGIWRINGA 225

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLK----------N 277
           K F++      +I    V        +  L   GSP     GL +  +K          +
Sbjct: 226 KRFITHAC--GYINAPSV--------ILTLARTGSPESGARGLSFFLVKGSDVHIAGVEH 275

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   + T E+ F N+ G L+G     TG       +  +++A ++++   + +A A +
Sbjct: 276 KLGLHCSPTCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAY 331

Query: 338 YARRRHVSGGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------- 381
           Y  +++ S  I   +P+ +    R I D +  +I A   L      + D           
Sbjct: 332 YEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHLIK 391

Query: 382 -EAKSRSEE---------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            E KS  E             A +  P++KY+  +   A+ ++A++  GGSGY E+  +A
Sbjct: 392 IEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVA 451

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITI 486
           R YR+S   +I  G+    ++  +  +  G +   QL    E +L         KKV   
Sbjct: 452 RIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVWKD 511

Query: 487 LRDSISLCK 495
           L  SI L K
Sbjct: 512 LDTSIGLYK 520


>gi|319764065|ref|YP_004128002.1| isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|330823660|ref|YP_004386963.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118626|gb|ADV01115.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|329309032|gb|AEB83447.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 390

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 32/264 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+GLTE   GTD+ AI +  ++  D  Y ++G K W  +S   +   +L + + +     
Sbjct: 127 GVGLTEPDAGTDLQAIRTVARREGDH-YVVNGSKMWITNSMYGNCLALLVKTDPKA---- 181

Query: 258 VPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGD-LNV 304
            PR     LL      G    +   K+G +   T  L F N         G + G  L  
Sbjct: 182 EPRHKGMSLLIAEKGEGFIVSKKLEKLGYKGIDTCALSFENYRVPADRLVGGVEGKGLQQ 241

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G +E    L  ++ A   +   + +L EA+ YA+ R   G  + +   ++  + ++A 
Sbjct: 242 VLGGLE----LGRINVAARGLGIAQAALEEAVAYAQVRKTFGKPIAEHQAIQLKLGEMAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA  L +  A +FD  +    EA  A       KY+  +       EAM   GG GY
Sbjct: 298 RTQAARLLVYAAAEAFDRGERCDMEAGMA-------KYFATEAGQENALEAMRIFGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGN 448
            +E ++ R YR++P   +L+G G 
Sbjct: 351 SKEYNVERLYRDAPL--LLIGEGT 372


>gi|295395834|ref|ZP_06806022.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971369|gb|EFG47256.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 381

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 20/261 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           GL+E+  G+D A + ++  +  DG + L+G K W  ++ +S+ + ++A  +  G+ G  +
Sbjct: 124 GLSEREAGSDTAGMKTRAVRDGDG-WVLNGVKTWITNAGVSEFYTVMAVTDPDGKRGNNI 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
              ++E G   G  +   + K+G + + T EL F + +   + D        + +KI L 
Sbjct: 183 TAFVVEKGD-EGFSFGEKERKLGIKGSPTRELFFEDCW---IPDSRRVGEEGQGLKIALK 238

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   ++++   V +A+     AI Y + R   G  + D   ++  +AD+A  + AA  
Sbjct: 239 TLDHTRVTIAAQAVGVAQGALDYAIDYVKERKQFGKRIADFQAIQFMVADMATKLEAARQ 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A     AKS   +   +       K +   +A  +  +A++ +GG+GY+ +  + 
Sbjct: 299 LTYAAA-----AKSERNDDDLS-FFGAAAKAYASDVAMEITTDAVQLLGGAGYVVDHPVE 352

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R  R++    I  G+     L
Sbjct: 353 RMMRDAKITQIYEGTNQVQRL 373


>gi|212639345|ref|YP_002315865.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560825|gb|ACJ33880.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 380

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 118/313 (37%), Gaps = 63/313 (20%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    K W PK  S E             +   + +TE   G+D+A I +   K 
Sbjct: 97  IASYGTEEQKKKWLPKCVSGE-------------LITAIAMTEPGAGSDLAGIQTTAVKQ 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR----------LLEDGSPNGLC 271
            D  Y ++G K F+++ +    +++        C   P           L+ +    G  
Sbjct: 144 GDH-YIVNGQKTFITNGIHADLVLVV-------CKTNPSANPPHKGISLLVVERETTGFT 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDS------ 320
             R   K+G  +  T EL FS+           +  PVE++     K   YL        
Sbjct: 196 RGRKLEKVGLHAQDTAELFFSD-----------AKVPVENLLGEEGKGFYYLMEKLQQER 244

Query: 321 ---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              AI + +   V       Y + R   G  +     ++  +A++A +IA   A      
Sbjct: 245 LIVAIAAQTAAEVMFDLTKRYVKDRTAFGKTISQFQTVQFRLAEMATEIALGRAF----- 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+   +            + K+W  +MA  + +E M+  GG GY+EE  IAR YR+ 
Sbjct: 300 --LDDVIEQHIAGKDVVANVSMAKWWMTEMAKRIASEGMQLHGGYGYMEEYEIARRYRDI 357

Query: 438 PANSILLGSGNAM 450
           P ++I  G+   M
Sbjct: 358 PVSAIYAGTNEVM 370


>gi|111024923|ref|YP_707343.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|40787236|gb|AAR90153.1| putative acyl-CoA dehydrogenase [Rhodococcus sp. DK17]
 gi|110823902|gb|ABG99185.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 29/298 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +  +TT      W P + S E             V   +G+TE  GG+D+AA+ +  
Sbjct: 97  APYLVQLTTDEQKVRWLPGVCSGE-------------VLTAIGMTEPAGGSDLAALKTTA 143

Query: 219 QKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +  DG + LSG K F+++  S D  ++ A+         +     + S  G    R  +
Sbjct: 144 VRDGDG-WLLSGAKTFITNGYSADLVVIAARTSPEKKAKGITLFGVETSLPGFERGRKLD 202

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G     T EL   N   T   ++G+L+   G +  M  L    L  A+ +++     L
Sbjct: 203 KVGQDEADTAELFLDNVRVTDAHVIGELD--RGFIHMMSFLPQERLGCAVSNLAHAAQIL 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E + Y R R   G  +      K  IAD+   I    A   +   +    +  S +AA 
Sbjct: 261 VETVDYCRERTAFGQSIGTFQHNKFLIADLVTQIEVTQAYVDQCVAAHAAGELTSVDAAK 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A       K+W   +   VI   ++  GG GY+ E  +AR +R++  + I  GS   M
Sbjct: 321 A-------KWWTADVQNRVIDHCVQLHGGYGYMNEYRVARAWRDARVSRIWAGSNEIM 371


>gi|296270123|ref|YP_003652755.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092910|gb|ADG88862.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 383

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 131/318 (41%), Gaps = 61/318 (19%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P              M +  +    GLTE  GG+D+         + +G +
Sbjct: 101 TPEQKRRWLPG-------------MARGEILGAFGLTEPGGGSDVPGAMRTTAVLENGEW 147

Query: 227 CLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++G K F+++  +D    I +A V GR       +   LVP     G+P GL   +  +
Sbjct: 148 VINGTKAFITNSGTDITGVIAVAAVTGRREDGRPEISTILVP----AGTP-GLTVSKKYS 202

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGM 328
           K+G  ++ T EL F+        D  V   P E++         + L  LD   ++++ +
Sbjct: 203 KVGWSASDTRELSFT--------DCRV---PEENLLGVRGRGYAQFLQTLDEGRIAIAAL 251

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V LA     E+I YA+ R   G  L     ++  IAD+   +  A    +  A      
Sbjct: 252 SVGLAQGCVDESIKYAKERTAFGRELARHQAIQFKIADMEARVHTARLAYYHAAERMLAG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EAA A+++A          A     +A +  GG G++ E  + R YR+  A  + 
Sbjct: 312 EPFKKEAAIAKLVA-------SNAAMDNARDATQIFGGYGFMNEYPVGRFYRD--AKILE 362

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + +  +L   E G
Sbjct: 363 IGEGTSEIQRMLIARELG 380


>gi|296164098|ref|ZP_06846717.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295900538|gb|EFG79925.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 399

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 15/242 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A + ++  +  D  Y ++G K F++S +   F+  A   G  G   V 
Sbjct: 144 LAVTEPGAGSDVANLRTRAVRDGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVS 202

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L+ D    G    R  +K+G R + T EL F +        +    G    ++I+    
Sbjct: 203 LLVIDKGTPGFKVDRRLDKMGWRCSDTAELSFFDVRVPAANLVGAENGGF--LQIMQQFQ 260

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           S  + ++    + AE     A  +AR R   G  L  + V++  +A++A  +  A A + 
Sbjct: 261 SERLGIAVQAYATAERALKLAKGWARERQTFGKPLTARQVIRHKLAEMARQVDVARAYTR 320

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +   +   +    E +    MA  T  + C     V+ EA++  GG GY+ E  + RHY
Sbjct: 321 AVMQRWLAGEDVVTEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEVERHY 373

Query: 435 RE 436
           R+
Sbjct: 374 RD 375


>gi|238026553|ref|YP_002910784.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
 gi|237875747|gb|ACR28080.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
          Length = 596

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 61/337 (18%)

Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T     +   + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKARYVPKLVSGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ +   DG Y + G K F++     M+D  +  +LA+  G       +  F+V
Sbjct: 171 DLALVRARAEPQGDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  EDGS    N +    +++K+G +++ T  L++ +     G L+G+ +     +E
Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGHLVGEEHRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356
            M   I +++A   V    + +AE     A  +A+ R  S  +         +I  P ++
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVR 345

Query: 357 RAIADI-------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           R +  +             A A S       DEA+ +  +A Y   + P+ K W  +M  
Sbjct: 346 RMLGTMRALTEGARALAYVAAAHSDHAHAHPDEAERKRHQAIY-EYLVPVVKGWSTEMVN 404

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 405 EVASLGVQIHGGMGFIEETGAAQYYRDARILAIYEGT 441


>gi|171320424|ref|ZP_02909459.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171094342|gb|EDT39414.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D   + ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               LL +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|112253528|gb|ABI14351.1| acyl-CoA dehydrogenase protein 1 [Pfiesteria piscicida]
          Length = 430

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 26/268 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           L+E   G+D  A+ +  ++  D  + + G+K W  +S  +  F++ A  +  +    +  
Sbjct: 173 LSEPGSGSDAFALKTAARQDGDD-WIIDGNKCWISNSKEAGLFVVFANADFSKKHRGITA 231

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            ++E  +P G+   + ++K+G R+++T EL F N       +LG+L       E  K+ I
Sbjct: 232 FVVEKDNP-GMTIGKKEDKLGIRASSTCELNFDNCRVHKSAMLGELG------EGYKMAI 284

Query: 317 -YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+   + +    V LA      A+ Y R R   G  + D   M+   A  A++I AA 
Sbjct: 285 GLLNEGRIGIGAQMVGLARGAFDYALEYMRTRKQFGTAVSDFQGMQFQYARAAMEIEAAR 344

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +  A   +  +    EAA A++ A        ++A  V ++A++ +GG G+ +E   
Sbjct: 345 VLVYNAARMKEAGQPFVTEAAMAKLKAS-------EVAQMVSSQAIDWLGGVGFTKEFIA 397

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++YR+S   +I  G+ N  +L +   L
Sbjct: 398 EKYYRDSKIGTIYEGTSNIQLLTIAKAL 425


>gi|331696949|ref|YP_004333188.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326951638|gb|AEA25335.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 413

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 25/278 (8%)

Query: 184 DPTNKAPMQKTSVA---IG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           DP  +  + + S +   IG + L+E   G+D+AA++++ ++  D  Y L+G K ++ +  
Sbjct: 127 DPARRGELLRRSASGEWIGAIALSEPDAGSDLAAVSTRAERDGD-EYVLTGRKRWIGNAK 185

Query: 240 SDAFIMLAQVEGRVG------CFLVPRLLE---DGSPNGLCYQRLKNKIGNRSNATVELE 290
           +  FI +       G        L   L+E   D  P GL    + +KIG     T ELE
Sbjct: 186 AADFIQVLVRTADPGPGEKRSAGLATLLVEKERDAFPKGLTGSPI-DKIGYHGFVTWELE 244

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           F +     + D     G  E  + L    + +A  +V   R ++ + I Y ++R   G  
Sbjct: 245 F-DGLRVPVADEITEGGFAETQRWLTIARVHTAARAVGLARAAVEDCIGYLQQRRQFGHP 303

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + D   ++  +A +A  +  A A    +A+  D       E+A  +++A        +MA
Sbjct: 304 IGDFQAVRFTLARMAARVDQARAFYQHVAHQIDLGVPCERESAMVKLLA-------TEMA 356

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V  + ++  GG+GY  E  + RH+R++   +I  G+
Sbjct: 357 AEVTGDGIQLHGGNGYTTEHQVERHWRDARLTTIFEGT 394


>gi|301053873|ref|YP_003792084.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|300376042|gb|ADK04946.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 569

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L     ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLTFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|299771990|ref|YP_003734016.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298702078|gb|ADI92643.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 375

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AA+ ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAALKTRAVKDGDD-YILNGAKQFITSGDNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|256015006|ref|YP_003105015.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|255997666|gb|ACU49353.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|222081823|ref|YP_002541188.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221726502|gb|ACM29591.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 393

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 114 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMATRAKKV-DGGYSLTGAKTWISN 172

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +P++D F++  + E G +  F    +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 173 APIADVFVVWGKTEDGVIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMENVF 227

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                LL +++   GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 228 VPEENLLPNVSGLKGP------FTCLNSARFGIAWGALGAAEDCYAKARQYVLDRQQFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I        RL    ++     E       +  I K   C  
Sbjct: 282 PLAANQLIQKKLADMVTEITLGLQGCLRLGRMKEDGHPPVE-------LTSILKRNSCGK 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  IARH
Sbjct: 335 ALDIARAARDMLGGNGISDEFGIARH 360


>gi|50550801|ref|XP_502873.1| YALI0D15708p [Yarrowia lipolytica]
 gi|49648741|emb|CAG81061.1| YALI0D15708p [Yarrowia lipolytica]
          Length = 421

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 35/322 (10%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PSV+  + V         + W       +Y P   A  QK        L+E   G+D 
Sbjct: 119 VDPSVSVMNDVHNTLVNTCIRSWGSDALRNKYLPQLAA--QKVG---SFALSEPSSGSDA 173

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDG 265
            A+ S+  K  DG Y L+G K W  ++  ++ FI+ A ++   G      F+V + +   
Sbjct: 174 FAMKSRATKTDDG-YILNGSKMWITNAAEAELFIVFANLDPSKGYKGITAFVVEKDM--- 229

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324
              G+   + + K+G R+++T  L F + F   +   N+     +  KI I  L+   + 
Sbjct: 230 ---GVQIAKKEQKLGIRASSTCVLNFEDVF---IPKENLLGEEGKGYKIAIECLNEGRIG 283

Query: 325 VSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++   + LA     +A  YA   R   G  + +   M+  I   A +I AA  L +  A 
Sbjct: 284 IAAQMLGLAGGAFKKATGYAFNDRKQFGQYIGEFQGMQHQIGQAATEIEAARLLVYNAAR 343

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +     ++EAA A++       +  ++A  V ++A+E +GG G+  E ++ + +R+S 
Sbjct: 344 LKEAGVPFTKEAAMAKL-------YASQVAGNVASKAVEWMGGVGFTREETLEKFFRDSK 396

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             +I  G+ N  +  +  +++K
Sbjct: 397 IGAIYEGTSNIQLQTIAKIIQK 418


>gi|108797222|ref|YP_637419.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866307|ref|YP_936259.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108767641|gb|ABG06363.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692396|gb|ABL89469.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 611

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 48/371 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIEGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG     +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +     +++ +      A+ YA+ R V G             
Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR-IMAPI 399
             +   P ++R++           AL    A   D A ++      SE A     +M PI
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457
            K    + A A + E+++  GGSG++++  I ++ R++  +S+  G+      D     +
Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462

Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514
           +         +   +EQ + S SG   +   R  ++   ED + +A  LT  + A   + 
Sbjct: 463 VRDKGQALAYVAGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENP 522

Query: 515 AALYRAGMNDI 525
           A LY+ G+  +
Sbjct: 523 AELYKVGLGSV 533


>gi|92116392|ref|YP_576121.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91799286|gb|ABE61661.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 594

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 107/486 (22%), Positives = 200/486 (41%), Gaps = 74/486 (15%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGL 115
           G+Y    TA  L     + T  L      G++        +V   P W A  RR    G 
Sbjct: 30  GDYDADITAAVLEEAGRFATEVLTPLDRTGDQHGARLQDGRVTTAPGWAAAYRRWTAAGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173
           +       F       A       ++  + +  G  + P +T +++ AL    +  + K 
Sbjct: 90  NAVSGPEDFGGQGLPLAINAACTEIWSASNIAFG--LCPLLTLSAIEALTAHGSDALKKI 147

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K+ S E+  T    MQ         LTE + G+D+ ++ S+ ++ +DG Y + G K 
Sbjct: 148 YLEKLVSGEWSGT----MQ---------LTEPQAGSDVGSLRSRAERAADGSYRIVGTKI 194

Query: 234 FLS---SPMSDAFI--MLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277
           F++     M+D  +  +LA++     G  G   FL+ + L +     G+ N +    +++
Sbjct: 195 FITYGDHDMTDNIVHFVLARLPDAPAGTKGTSLFLISKFLVNADGSLGARNDIHASGIEH 254

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T  +   +     G+L+G+ N     +  M     L   +  V     +   
Sbjct: 255 KLGIHASPTCTMTMGDEGGAVGYLIGEENRGMQCMFTMMNQARLGVGLEGVGVAERAYQR 314

Query: 335 AIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLANS 379
           A+ YA+ R     +         +I  P +KR      A+   A  I  ATA++  +A  
Sbjct: 315 ALAYAQERKQGRAVGKSGDGMDAIIVHPDVKRMLMQMRALTAAARTICYATAVALDVAAR 374

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +   R+  AA   ++ P+ K +   +   V +  ++  GG G+IEE   A+HYR++  
Sbjct: 375 ATDPDVRAAAAARGALLTPVAKAFSTDIGNEVASLGVQVHGGMGFIEETGAAQHYRDARI 434

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN------LFEQLFSTLEQ-------DLGSSGKKVITI 486
            SI  G+     +D++     G        L ++L +T+++         G++G K    
Sbjct: 435 TSIYEGTNGIQSIDLVTRKLGGDGGAAVWALLDELSATVKRVEASNDPAFGATGTK---- 490

Query: 487 LRDSIS 492
           LRD++ 
Sbjct: 491 LRDALG 496


>gi|254474141|ref|ZP_05087533.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211956837|gb|EEA92045.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 390

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +  ++  +G Y L+G K F++S M   +  +A   G  G   + 
Sbjct: 136 LAITEPGGGSDVQNLKTVARR-ENGHYVLNGEKTFITSGMRADYYTVAVRTGDTGMGGIS 194

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            +L +    G     L +K+G  ++ T  L F N       L+G  N        M I++
Sbjct: 195 LMLVEKGMEGFTQTPL-HKMGWWASDTATLYFDNVKVPVENLIGGENAGF-----MGIMM 248

Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             ++  + ++      M     EA+ +A++R   G  LI + V++    D+A+ + A  A
Sbjct: 249 NFNNERLFLASACYGHMLGVFEEALDWAQQRETFGKPLIHRQVIRHKFVDMAMKMQAVRA 308

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   LA      +S   E   A+ +A  T  +       V  E ++ +GG+GY+    + 
Sbjct: 309 VLEELAQRLQLGESPITEICMAKNLATSTLEY-------VANECLQILGGAGYMRGTKVE 361

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE+   +I  GS   M
Sbjct: 362 RIYRETKVMTIGGGSSEIM 380


>gi|297155712|gb|ADI05424.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 390

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           L+E   G+D A +T++  +  DG + L+G K W     ++D + ++ +        +  F
Sbjct: 133 LSEPSSGSDAAGLTTRAAREGDG-WTLTGSKAWITHGGIADFYTVMTRTGPDRTRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G  +GL     + K+G + + T ++   +     + D        +   I L
Sbjct: 192 LVP-----GDASGLSAAAPERKMGMKGSPTAQIHLEDVH---VPDARRIGEEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   + LA     EA+ Y  +R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDAGRLGIAACSIGLAQAALDEAVAYTAQRRQFGHPVADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +  S++AA A       K +C   A  V  +A++ +GG GY  +  +
Sbjct: 304 ALYLAAARLRDAGRPFSKQAAMA-------KLFCTDTAMKVTTDAVQLLGGYGYTADFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYMREAKVLQIVEGT 372


>gi|294630414|ref|ZP_06708974.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292833747|gb|EFF92096.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 608

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDKHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399
                 P ++R++           AL    A+  DE + +       S E A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDEIQVKEANGEDASAEHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + A   +A++++  GGSG+++E  I ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447


>gi|239932220|ref|ZP_04689173.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440583|ref|ZP_06579973.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343478|gb|EFE70434.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 383

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 45/302 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   +    + W P + S  Y              +G  GLTE   G+D   ++++
Sbjct: 95  AKTVAAWGSEEQKRTWLPGLTSGAY--------------VGCFGLTEPGTGSDAGNLSTR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G K F+++   +D  ++ A+     G   V   L      GL  + + 
Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHRGVSAFLVPADAPGLTRRAVH 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329
            K+G R  AT EL        +L D+ V      GP E     + L +     MSV+   
Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASAMLGP-EGKGFPVALSALAKGRMSVAAGC 250

Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D  K
Sbjct: 251 VGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELISDIAVDVDAARLLTWRVADLIDRGK 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E++ A++ A        + A      A++  GG GYI+E    +  R++   ++  
Sbjct: 311 PFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYE 363

Query: 445 GS 446
           G+
Sbjct: 364 GT 365


>gi|188991130|ref|YP_001903140.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732890|emb|CAP51084.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 597

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 46/295 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPPGA 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G     
Sbjct: 226 KGISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGL---- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV- 354
             P + ++ +   +++A +SV    + L+E     A+ Y R     R +SG    D+P  
Sbjct: 282 --PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPDKPAD 339

Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401
                  ++R +  I      +  L+   A+  D A      + R++       + PI+K
Sbjct: 340 PIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               + +      A++C GG GYI E  + +  R++   +I  G+     LD++ 
Sbjct: 400 ACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454


>gi|326571368|gb|EGE21383.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC7]
          Length = 559

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 127/289 (43%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFVNVARLGTAIQGLAAPELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPITKYWCCK 406
            ++  +           AL + L+  F +  ++ E  +  +       ++ PITK +  +
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEMLSLLTPITKAFLTE 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                    ++  GG GYI E  + ++ R++  + +  G+     LD+L
Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLL 451


>gi|325124630|gb|ADY84153.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 406

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373


>gi|317124404|ref|YP_004098516.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315588492|gb|ADU47789.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 389

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 50/370 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYL------MAQLEAGHLMSPSVTSASMVALM 165
           HD L  S +   F P V ++   + A  L        +A+++A   + P+V     + L+
Sbjct: 50  HDALVASDF---FAPHVPEEYDGVGADALATCIVIEEVARVDASACLIPAVNKLGSLPLI 106

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                    A +   R Y P    P+         GL+E+  G+D A++  + ++  D  
Sbjct: 107 LA-------ASEDVKRRYLP----PLAHGETTFSYGLSEREAGSDTASMKCRARRDGDD- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           + L+G K W  ++ +S+ + +LA  +        V  F+V +     S  G  +   + K
Sbjct: 155 WVLNGQKSWITNAGVSEYYTVLAVTDPDGPRGNNVTAFVVEK-----SDAGFTFGEKERK 209

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKI-LIYLDSAIMSVSGMRVSLAE-- 334
           +G + + T EL F N    + GD  V  G V D +KI L  LD   +++    + +A+  
Sbjct: 210 LGIKGSPTRELHFDNVR--IPGDRVV--GEVGDGLKIALRTLDHTRVTIGAQAIGIAQGA 265

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ Y + R   G  + D   ++  +AD+A+++ AA  + +  A     AKS   +  
Sbjct: 266 LDQAVAYVKERKQFGKRIADFQGIQFMLADMAMEVEAARQMVYVAA-----AKSERGDKD 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +   +A  V  +A++ +GG+GY ++  + R  R++    I  G+     
Sbjct: 321 LT-FFGAAAKCFASDVAMKVTTDAVQLLGGAGYTKDFPLERMMRDAKITQIYEGTNQIQR 379

Query: 452 LDVLNLLEKG 461
           + +   L KG
Sbjct: 380 VVMARQLLKG 389


>gi|296107547|ref|YP_003619248.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|295649449|gb|ADG25296.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 375

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 36/281 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P+I S E                 L LTE   G+D+  + +Q     D        K+
Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++D F++LA  +G++   LV +       +GL    + N +G RSN   E+ F N
Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
                  LLG + +    V    I   LD    + +   V L +A     + Y ++R   
Sbjct: 210 CRIPKTNLLGSIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ I ++   + AA  L F       E + +   A  A  +  I KY   
Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           KM   V   A++  G +G+ E   + R+YR++    I+ G+
Sbjct: 320 KMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360


>gi|197106815|ref|YP_002132192.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480235|gb|ACG79763.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 595

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 46/297 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  + ++    +DG Y ++G K ++S    D       ++LA++EG   
Sbjct: 162 MNLTEPHCGTDLGLLRTKAVPQADGTYKITGQKIWISGGEQDLTPNIVHLVLARIEGAPA 221

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ + D     G  N +    L+ K+G   NAT  +      G+L+G+ N
Sbjct: 222 GVRGISLFIVPKFIPDANGEPGERNSVKCLGLEEKMGIHGNATCVISHEEATGWLVGEEN 281

Query: 304 VSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQP 353
                 + +K++ + ++ A + V    ++ AEA + A         + R ++G    D P
Sbjct: 282 ------QGLKLMFVMMNEARLGVGLQGIAQAEAAYQAAAEFAKERLQGRSLTGPKNPDGP 335

Query: 354 --------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
                         +  RA+ +      A TAL   LA++ ++   R +   Y  +M P+
Sbjct: 336 ADPIIVHPDVRRMLLDSRALIEGGRAFMAWTALHGDLAHASEDEAVRQKGRDYMALMTPV 395

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            K +       V ++AM+  GGSG+ E    +++ R+     I  G+     LD++ 
Sbjct: 396 VKAFLTDRGFKVCSDAMQVHGGSGFTEHFPASQYLRDVRIALIYEGTNGVQALDLVG 452


>gi|254482934|ref|ZP_05096170.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036806|gb|EEB77477.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 610

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 35/308 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQV----EGR 252
           LTE   G+D+  + S+ +  +DG Y ++G K F+S+    M+D    I+LA++    EG 
Sbjct: 179 LTESHCGSDLGLLRSKAEPQADGSYAITGQKIFISAGEHDMTDNIIHIVLARLPDAPEGT 238

Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+  + EDG+    N +    +++K+G   NAT  L F     +L+G+ N  
Sbjct: 239 KGISLFIVPKVNVSEDGTLGELNAVHCASIEHKMGIHGNATAVLNFDGAKAYLIGEENRG 298

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQP 353
              +        + +A   ++ M +S   A+ YA+ R     +            +I  P
Sbjct: 299 LNCMFTFMNTARVGTAAQGLAHMELSFQGALAYAKDRLAMRSLTGPKNPDGPADPIIVHP 358

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMA 408
            ++R +         + A  + LA   D     +EE A A      ++ PI K +  +  
Sbjct: 359 DVRRMLLTQKAFAEGSRAFLYFLAMQGDIVDKGTEEEAKAADDLMSLLTPIAKAFMTETG 418

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                  ++  GG G+I+E  + +  R+     +  G+     LD++   +L  G  L  
Sbjct: 419 YEAANHGVQIFGGHGFIQEWGMEQIVRDCRIAMLYEGTTGIQALDLIGRKVLGSGGKLLT 478

Query: 467 QLFSTLEQ 474
              + +E+
Sbjct: 479 NFTAMIEE 486


>gi|152977527|ref|YP_001377044.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026279|gb|ABS24049.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 379

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  +  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTTARREGNH-YILNGSKIFITNGGIADIYVVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +           + +    G    + ++K+G RS+ T E+ F +       LLG+    
Sbjct: 172 TDLEAKQRGTSAFIVESDAPGFLIGKKESKLGIRSSPTTEIIFEDCRIPVENLLGEEG-- 229

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  LD     ++   V +A+A     + YAR RH  G  +  Q  +   +
Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQAALDVSVAYARERHQFGKPIAAQQGISFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L+++ A    E     +E+A       ++K +   +A  V  EA++  
Sbjct: 286 ADMATNVEAARLLTYQAAWLESEGLPYGKESA-------MSKLFAGDIAMKVATEAVQIF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|328544910|ref|YP_004305019.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414652|gb|ADZ71715.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 593

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++    D       ++LA++     
Sbjct: 160 MNLTEPQAGSDLNALKARAERRPDGTYRIFGQKIFITYGEHDITDNIVHLVLARLPDAPA 219

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  FLVP+ L  EDGS    N +    +++K+G   + T  + + +     G+L+G
Sbjct: 220 GTRGISLFLVPKFLVNEDGSLGARNDVRCAGVEHKLGIHGSPTCTMIYGDGEGAIGWLVG 279

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------ILID 351
           + N     +  M     L   I  +     +  +A+ YA  RR+  + G        +  
Sbjct: 280 EENRGLACMFTMMNNARLAVGIQGLGIAERAFQQALAYALDRRQGRAPGDAGEGMSAIAG 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405
            P +KR++  +      A A+ F  A++ D A   ++  A A       ++ PI K    
Sbjct: 340 HPDIKRSLLFMQARTQVARAICFACAHAIDMASLATDPEAKAHWSDRAGLLTPIAKALST 399

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +   V +  ++  GG GYIEE   A+H R++    I  G+     +D++ 
Sbjct: 400 DIGVEVASTGVQIHGGMGYIEETGAAQHLRDARIAPIYEGTNGIQAIDLVQ 450


>gi|304405251|ref|ZP_07386911.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346130|gb|EFM11964.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 379

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 18/263 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P+ ++  A+G  GL+E   GTD  ++ ++  +  D        KW     ++D +++ A+
Sbjct: 111 PLLESGEAVGAFGLSETSAGTDAQSLETKAVRNGDSFLLQGTKKWISLGQLADIYLIFAK 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            EG++  FLV R     +  GL  + +    G R +   EL            L  S G 
Sbjct: 171 CEGQISLFLVER-----NTPGLTVEPIPPLAGLRGSMLAELRLEQCR-VREDSLVGSIGT 224

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
              M  L  LD    +V+   V +A      A+ YA  R+  G  L +  ++++ I ++ 
Sbjct: 225 GLSMIGLFCLDYGRYTVAWGCVGIARSCIEHALAYAASRNQFGSQLSEFQLIQKMITEMV 284

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + + AA  L        DE    S    +        KY+  K+      ++++  G SG
Sbjct: 285 VGLEAARLLCLEAGRMRDEGDPDSIMETWK------AKYFASKLVVETAGKSVQIHGASG 338

Query: 424 YIEERSIARHYRESPANSILLGS 446
            ++   + RHYR++    I+ G+
Sbjct: 339 LVQGTPVERHYRDAKVYEIIEGT 361


>gi|294141410|ref|YP_003557388.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293327879|dbj|BAJ02610.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 598

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 57/374 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  A+    +  + + +  K+ S E+  T             + LTE   GT
Sbjct: 125 MYPGLTHGAYAAIHAHGSDALKQKYLEKLVSGEWTGT-------------MNLTESHAGT 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++  +  +G++ +SG K F+SS   D       ++LA++    EG  G   F V
Sbjct: 172 DLALLRTKAVEAGEGLFAISGEKIFISSGDHDLAENIIHLVLARLPNAPEGVKGISLFAV 231

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+++ +     G  N LC   L++K+G   N+T  + F    G L+G+ +     +  M 
Sbjct: 232 PKIMVNADGSLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLRAMFTMM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIA 360
               L   +  +    ++   A+ YA+ R    G             IL+   V +  +A
Sbjct: 292 NQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRGLSGVKDASQAADPILVHGDVRRMLMA 351

Query: 361 DIALDIAAATALSFRLANSFDEAKSR------SEEAAYARIMAPITKYWCCKMAPAVIAE 414
             + +   A AL  + A   DEA+              A +  PI K +          +
Sbjct: 352 QKSFN-EGARALIGQQALWLDEAERHPDADKAKAANKLAALFTPIVKGFITDRGFNACVD 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF---EQL 468
           A +  GG GYI E  + ++ R+     +  G+     LD++    + +KG  L    E +
Sbjct: 411 AQQVFGGHGYIHEWGMEQYVRDIRIAMLYEGTNGVQALDLVGRKVMGDKGATLMVWSEMV 470

Query: 469 FSTLEQDLGSSGKK 482
            + + +++G    K
Sbjct: 471 KTLIGENMGKDAMK 484


>gi|169628168|ref|YP_001701817.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240135|emb|CAM61163.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 385

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K F++S +   +++ A   G  G   V 
Sbjct: 127 LAITEPGGGSDVGHLTTSAKRDGD-HYIVNGAKTFITSGVRADYVVTAVRTGGPGAAGVS 185

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL D    G    R  +K+G RS+ T EL F++       L+G  N     +    +  
Sbjct: 186 LLLIDKDTPGFEVARKLDKMGWRSSDTAELSFTDVRVPAENLVGSENTGFAQIAGAFVSE 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + +  +  L   + + R R   G  LI +  ++  +A++A  I  A   +  L
Sbjct: 246 RIGLAAQAYASAQRCLDLTVEWCRNRETFGRPLISRQSVQNTLAEMARRIDVARVYTHAL 305

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            +     +S    E  +A+  A     W       V  + ++  GG GY+ E  I R YR
Sbjct: 306 VDRAIAGESNLIAEVCFAKNTAVEAGEW-------VANQGVQLFGGMGYMAESEIERQYR 358

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     I +G G   +L  L
Sbjct: 359 D--MRIIGIGGGTTEILTSL 376


>gi|93004979|ref|YP_579416.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92392657|gb|ABE73932.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 606

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 37/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE + GTD+  + S+     D  Y LSG K F+SS   D       I+LA++    EG 
Sbjct: 165 LTEPQCGTDLGQVKSKAIPQDDASYKLSGTKIFISSGEHDLTENIIHIVLARLPDAPEGT 224

Query: 253 VGC--FLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+ L     E G  NG+    +++K+G  S+AT  L F +  G+L+G+ N  
Sbjct: 225 RGISLFIVPKFLPNAEGEIGERNGVSCGSIEHKMGISSSATCVLNFDDAVGYLIGEPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352
              +        + + I  ++   +S   A+ YA+ R              V+  I+   
Sbjct: 285 LKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLSGTKDPEKVADAIIHHA 344

Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404
            V +  +   A      + +  S R A+   +     ++  + +         PI K + 
Sbjct: 345 DVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEKWDDKLGFYTPILKGFL 404

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            ++         +  GG GYI+E  +    R++   ++  G+     LD+L
Sbjct: 405 TELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTGIQALDLL 455


>gi|322371814|ref|ZP_08046357.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320548699|gb|EFW90370.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 380

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 23/271 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ + +      L+E   G+D+ A+ +  +K  D  Y L+G K W  +  ++D   + A+
Sbjct: 113 PLNQGTDIGAFALSEPGAGSDVPAMDTTAEKDGD-EYVLNGGKLWISNGSVADTVTVFAK 171

Query: 249 VEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
            +   G       V R  ED   +G   +  ++K+G++   T EL FS+       LLG+
Sbjct: 172 TDPDAGNKGISSFVVRPEED---DGFHVEGTEHKLGDKGCPTAELRFSDLRIPEDRLLGE 228

Query: 302 LNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  +K L    +  A  S+   R +  +A+ YA++R      + D   ++  +
Sbjct: 229 --EGDGFVHALKTLNGGRITIAARSIGLARAARDDALEYAQQREQFDRPISDFQTIQHKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L  R A+     +   + AA A++ A        +++  V  E ++  
Sbjct: 287 ADMDTKVQAAKLLMHRAADRKIRGEDFIKHAAQAKLFA-------SEISREVANEGIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY  +  + R+YR++  N I  G+   +
Sbjct: 340 GGYGYTTDFDVERYYRDAKLNEIYEGTSEVL 370


>gi|317405891|gb|EFV86173.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 397

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 25/244 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G+D   + ++  K +DG Y L+G+K W  +SP++D F++ A+ V G     +
Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTADG-YKLTGNKMWITNSPIADVFVVWAKCVGGEFDGKI 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKI 314
              +LE G+  GL    +  K+G R++ T E+   E   +   ++  ++   GP      
Sbjct: 196 RGFILEKGT-KGLTAPAIHGKVGLRASITGEIVMDEVEVSADQMMPGVSGLKGP------ 248

Query: 315 LIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  +I  A
Sbjct: 249 FTCLNSARYGIAWGAIGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLA 308

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  
Sbjct: 309 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFG 361

Query: 430 IARH 433
           +ARH
Sbjct: 362 VARH 365


>gi|301632570|ref|XP_002945354.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 376

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 30/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ +  +     LTE   G+D +A+ +   +  DG Y L+G K F++S  +    ++  
Sbjct: 110 APLARGEMLGAFCLTEPHVGSDASALRTTAVQEGDG-YVLNGVKQFITSGQNGQVAIVIA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295
           V     G+ G   FLVP         G    RL++K+G  S+ T ++ F       +N  
Sbjct: 169 VTDKAAGKKGMSAFLVPT-----DTPGYVVARLEDKLGQHSSDTAQIHFDGCRIPAANLI 223

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G       ++   +E  +I I    A  S+   R +   A+ Y++ R   G  + +   +
Sbjct: 224 GAEGEGYKIALSALEGGRIGI----AAQSLGMARAAFECALQYSKERESFGQAIFEHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A+ A  I AA  L +  A+  D  +   +EAA A++ A        +MA  V + A
Sbjct: 280 GFRLAECATQIEAARQLIWHAASLRDAGQPCLKEAAMAKLFAS-------EMAERVCSAA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG G + +  + R YR+     I  G+ +
Sbjct: 333 IQTLGGYGVVSDFPLERIYRDVRVCQIYEGTSD 365


>gi|167563902|ref|ZP_02356818.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
           EO147]
 gi|167571037|ref|ZP_02363911.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
           C6786]
          Length = 395

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGSKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +++      +   +LE G   GL    +  K+G R++ T E+   + F   + + N+  G
Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPTIHGKVGLRASITGEIVLDDAF---VPEENIMPG 239

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADI 362
                     L+SA   ++   +  AE+  +  R++V      G  L    ++++ +AD+
Sbjct: 240 VKGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADM 299

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I        RL    DE  +  E       +  I K   C  A  +   A + +GG+
Sbjct: 300 QTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGN 352

Query: 423 GYIEERSIARH 433
           G  +E  +ARH
Sbjct: 353 GISDEFGVARH 363


>gi|168186034|ref|ZP_02620669.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
 gi|169295969|gb|EDS78102.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
          Length = 379

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F+++  ++D FI  A  +   G   +
Sbjct: 123 FGLTEPNAGTDASGQQTVAVKQGDK-YILNGQKIFITNGGVADVFIAFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    ++++K+G R+++T EL F +       L+G      G    MK  
Sbjct: 182 SAFIVEKGFKGFSIGKVEDKLGIRASSTTELIFEDCEVPAENLIGKEGRGFGIA--MKT- 238

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + VS   + +A     EA+ Y + R   G  L     M    A+    I AA 
Sbjct: 239 --LDGGRIGVSAQALGIAEGALEEAVEYMKERKQFGKQLYKFQGMGWMAAECKAKIEAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A +    K  + EAA A++ A  T       A  V  +A++  GG GY ++  +
Sbjct: 297 YLVYKAAYNKMTGKPYTVEAATAKLFAADT-------AMEVATKAVQMFGGYGYTKDYPV 349

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 350 ERMFRDAKITEIYEGT 365


>gi|91777411|ref|YP_552619.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690071|gb|ABE33269.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 379

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 140/334 (41%), Gaps = 48/334 (14%)

Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKD-WAPKIFSREYDPTNKAPMQKTSVA 197
           Y     + GH  +++  V  A +  L     VH D  AP I     +   +  + KT   
Sbjct: 62  YGGGGGDFGHAAILNEEVNRAGLSGLGFG--VHSDVIAPYIARIGNEEQKQKWLPKTCTG 119

Query: 198 ---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
              + +G+TE   G+D+ AI +   +  D  Y ++G K F+S+ + +D  I++ + +   
Sbjct: 120 ESILAIGMTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSA 178

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLL 299
           G   V  ++ + +  G    R  +K+G  S  T EL F N               F +L+
Sbjct: 179 GSKGVSLIVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLM 238

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+L     P E + I      AI + + +   L   I+Y + R      + D    K  +
Sbjct: 239 GEL-----PQERLSI------AIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKL 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           ADI    A ATA+   + +   E   R    EEAA A++ A        +     + + +
Sbjct: 288 ADIK---AQATAVRVLVDHYLAEHVRRRLTLEEAAIAKLFA-------TESLGKALDDMV 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  +AR + ++  N I  G+   M
Sbjct: 338 QLHGGYGYMLEYPVARAFADARVNRIYGGTSEVM 371


>gi|78046920|ref|YP_363095.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035350|emb|CAJ22995.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 407

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 147 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 204

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            +      G+ Y R + K+G  S  T  + F N     +   N+     E  K+ +  LD
Sbjct: 205 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 262 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 321

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 322 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 375

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 376 RDSRVHRILEGTNEVMRMIVARHLLNG 402


>gi|260221282|emb|CBA29691.1| Long-chain specific acyl-CoA dehydrogenase,mitochondrial
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 412

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + ++E   G+D+  I S   +  DG Y L+G K F+++   +D  +++A+     G  G 
Sbjct: 149 IAMSEPAAGSDLQGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGT 208

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311
            L+  L+E G P     QRLK K+G ++  T EL F N        L G    + G +  
Sbjct: 209 SLL--LVERGMPGFSVGQRLK-KMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICL 265

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L +  L  AI +VS  + ++   + Y + R V G  +      +  +A++   +  A
Sbjct: 266 MEQLPWERLQIAIGAVSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVA 325

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +      + +  +  A+ A       KYW   +   V+ E ++  GG GY+ E  
Sbjct: 326 RVFVDKCCELIGKDQLDTATASMA-------KYWTTDLQCKVMDECVQLFGGYGYMWEYP 378

Query: 430 IARHYRESPANSILLGSGNAM 450
           I R Y ++    I  G+   M
Sbjct: 379 ITRAYADARVQRIYGGTNEIM 399


>gi|224370925|ref|YP_002605089.1| Acd12 [Desulfobacterium autotrophicum HRM2]
 gi|223693642|gb|ACN16925.1| Acd12 [Desulfobacterium autotrophicum HRM2]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 19/258 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256
           G G+TE   G+D+ A+ +  +   D  Y L+G K W  ++ ++D  I  A  +  +G   
Sbjct: 123 GFGITEADAGSDVMAMATTAEDKGDH-YLLNGSKTWISNAAIADVLICYAYTDKEIGTKG 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L   ++E  +  G+    L+ K+G+ S+ T E+   N     +   N+   P +  KIL 
Sbjct: 182 LSAFVIEPKNFPGITTSALE-KLGSHSSPTGEVFLDNV---KVPKENLLGKPGDGAKILF 237

Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L +A   V   +  L EAI Y   R   G  +    + +  IA +A +I AA 
Sbjct: 238 GSLNHTRLSAAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +R A   D+    +       +     KY   ++A      AM  +G  GY  E  +
Sbjct: 298 FMVYRAAFEKDQGNINN------GLDVAKAKYLAGEVATKASNFAMRILGAYGYSTEYPV 351

Query: 431 ARHYRESPANSILLGSGN 448
           AR YR++P  S++ GS N
Sbjct: 352 ARFYRDAPTYSMVEGSAN 369


>gi|171057876|ref|YP_001790225.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775321|gb|ACB33460.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP    D+ P++ S E             + +   LTE   GTD A++ ++ +   D  Y
Sbjct: 102 TPEQKADYLPRVASGE-------------LIMSFALTEPDAGTDAASLKTRAELDGDH-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            L+G K F++ +P + AF ++A+      G V  F+VP     G P GL   +   K+G 
Sbjct: 148 ILNGTKRFITNAPRAGAFTLMARTGGPGAGGVSSFIVPA----GLP-GLKLGKPDKKMGQ 202

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334
           R   T ++   N     +   N+  G P +  K  +  LD   +++S +   LA     E
Sbjct: 203 RGTKTCDVILENV---RVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVSCGLASRIIDE 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           +  YAR R   G  + +  +++  +AD   ++ A  +L   +A  FD AK          
Sbjct: 260 SRRYARERKQFGKAIGEFQLIQAMLADSQAEMLAGWSLVKDVALRFD-AKPAHVSDPDVS 318

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +     K +  +M   V    ++  GG+GYI E  + R YR++
Sbjct: 319 MRVSCAKLFATEMVGRVADRGVQIHGGAGYINEYPVERFYRDA 361


>gi|73540508|ref|YP_295028.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72117921|gb|AAZ60184.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 397

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K++ G Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVNGG-YELTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++ G  G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLAGEDGKEDIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             + + N+  G V+ +K     L+SA   ++   +  AE     A  Y   R   G  L 
Sbjct: 233 --VPEENIMPG-VKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLA 289

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  
Sbjct: 290 QTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLD 342

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  + RH
Sbjct: 343 IARVARDMLGGNGISDEFGVIRH 365


>gi|325919917|ref|ZP_08181906.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325549626|gb|EGD20491.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 393

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 24/270 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D A++ ++ Q+  D  Y L+G K F+S +  +D  +++A+   +G  G   F
Sbjct: 133 LTEPGAGSDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +VP         G+ Y R + K+G  S  T  + F++     G LLG      G    MK
Sbjct: 192 VVP-----ADAPGISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLG--KEGEGFKMAMK 244

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    ++ A  S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  
Sbjct: 245 ALDGGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQ 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A   D           A +   + K +      A+  +A++  GG GYI E  I 
Sbjct: 305 MVHTAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIE 358

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R  R+S  + IL G+   M + +   L  G
Sbjct: 359 RLLRDSRVHRILEGTNEVMRMIIARHLLNG 388


>gi|288931380|ref|YP_003435440.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288893628|gb|ADC65165.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 381

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 36/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEG---R 252
           + +TE   GTD+AA+ ++  K  D  + ++G K F+++     + ++    AQV+     
Sbjct: 121 IAVTEPDCGTDVAAMRTRAVKEGDE-WVINGTKQFITNGSVGIYTVVLAKTAQVDPPHRG 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           +  FLV +  E        Y+ R   K+G   + T E+   N       L+G+ N     
Sbjct: 180 ISAFLVEQDREG-------YEARPIEKMGMHCHDTCEVALKNVRVPADHLIGEENRGF-- 230

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               +++ + + + + ++ +   +A      A+ YA+ R   G  LI+   ++  +A++ 
Sbjct: 231 ---YQLMAFFNESRVKIAALHTGIAIGAYERALEYAKERKAFGKPLIEHQAIQFKLAEMF 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            DI AA  L F+ A   D+ K     ++ A++ A        +MA  V  EA++  GG G
Sbjct: 288 KDIEAAKLLVFKAAWLIDQGKPDPALSSAAKLFA-------SEMAVKVTYEAVQIFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNA 449
           Y +E  + R+YR++   +I  G+  A
Sbjct: 341 YSKEYDVERYYRDARVGTIYEGTSEA 366


>gi|229102936|ref|ZP_04233628.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228680481|gb|EEL34666.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 569

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   D+A   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|197119199|ref|YP_002139626.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197088559|gb|ACH39830.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 385

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 49/293 (16%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K + P+I S EY             A    LTE   G+D A +T+      D  + L+G
Sbjct: 108 KKKYIPRICSGEY------------AAGAFALTETGAGSDPAGMTTSAVAEGDQ-WVLNG 154

Query: 231 HKWFLSS-PMSDAFIMLAQVE-----GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            K F++S P +  F++ A  +     G+ + CFLV    E G+P GL   + + K G  +
Sbjct: 155 SKIFITSAPYAGVFVVWAVTDKDAPKGKGISCFLV----EQGAP-GLVIGKQEEKTGQHA 209

Query: 284 NATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
           +AT E+ F N       L+G LN    ++ G +   +I I          G+ V LA   
Sbjct: 210 SATCEVLFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGI-------GSLGLGVGLAAMD 262

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R   G  + +   ++  +A+   ++ AA  L  + A   D  KS ++EA+ A
Sbjct: 263 FATRYASERVQFGQKITNFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGKSFAKEASMA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ A       C         A++ +GG GY  +  + R+ R++   +I  G+
Sbjct: 323 KMYATEAANRACY-------SAVQMLGGYGYTRDFPVERYARDARITAIYEGT 368


>gi|160896784|ref|YP_001562366.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160362368|gb|ABX33981.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 601

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 161/379 (42%), Gaps = 67/379 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHVHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC----- 255
           D+  + ++ + ++   +G Y ++G+K F+S+   D       ++LA++ +  VG      
Sbjct: 175 DLGLLRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTDNIVHLVLARLPDAPVGSKGISL 234

Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ +   DGS    N +    L++K+G   NAT ++      G L+G  N       
Sbjct: 235 FVVPKFVVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGQPNKGL---- 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP-------- 353
              + + +++A + V    + L E     A+ YA+ R     +SG    D+P        
Sbjct: 291 -QAMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKPADPIIVHP 349

Query: 354 ----VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKM 407
               ++  A A      A  T  +F +   F+  + K R + A    ++ PI K +    
Sbjct: 350 DVRRMLLTAKAYAEGGRALVTYCAFLIDKEFNHPDEKVRKDSAELVALLTPIVKAFITDN 409

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
                  + +  GG G+I E  + +  R++  N I  G+     LD+L    L  +G +L
Sbjct: 410 GWTATTMSQQVYGGHGFITEWGMEQFVRDARINMIYEGTNGIQALDLLGRKVLGNQGASL 469

Query: 465 --FEQLFSTLEQDLGSSGK 481
             F +L + L ++ G + K
Sbjct: 470 KKFGKLVAQLVEEEGVNEK 488


>gi|167645838|ref|YP_001683501.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167348268|gb|ABZ71003.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 51/296 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + P + S E+  +             L ++E   G+D+ ++ ++ +K  D  Y
Sbjct: 112 TPEQKRKYLPGLISGEHLGS-------------LAMSEAGSGSDVMSMRTRAEKKGD-RY 157

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+G K W  +SP +D  ++ A+     G V  FL+ + +      G    +  +K G R
Sbjct: 158 ILNGTKFWITNSPTADTLVVYARTGEGNGGVSTFLIEKGM-----RGFSVSKKLDKFGMR 212

Query: 283 SNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRV 330
            + T EL F        N  G + G   +         ++  LD     +SG     M+ 
Sbjct: 213 GSDTAELVFEDCEVPAENVMGPVGGGAGI---------LMSGLDYERTVLSGGPLGIMQA 263

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L   + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D  K+   +A
Sbjct: 264 CLDVVLPYVRERKQFGKAIGSFQLMQAKVADMYVALNSARAYVYAVARACDAGKTTRFDA 323

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A A ++A        + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 324 AGAILLA-------SENAVRVSLEAVQALGGAGYTKEWPVERFVRDAKLYDIGAGT 372


>gi|218903487|ref|YP_002451321.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|218535100|gb|ACK87498.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
          Length = 569

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 23/273 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +      DG  + L+G K W  ++ M+D +++  +    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFTKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R YR++  + I  G+     L V  +L K
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMK 411


>gi|134098043|ref|YP_001103704.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338]
 gi|291007193|ref|ZP_06565166.1| acyl-CoA dehydrogenase-like protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910666|emb|CAM00779.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338]
          Length = 389

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 32/265 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D AA+  Q + + DG  Y L G K F+S    SD ++++A+  G  G   + 
Sbjct: 133 LTEPEAGSDAAAL--QTRAVRDGDHYVLDGVKQFISGGGNSDVYVVMART-GEPGPKGIS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTG 307
             + +G   GL +   + K+G  +  T ++ F                GF +    +  G
Sbjct: 190 TFVVEGDTPGLSFGPNEKKMGWNAQPTRQVVFQGVRVPATHRLGEEGIGFRIAMAGLDGG 249

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     L  A  S+ G R +L +++ Y   R   G  L D  V++  +AD+A ++ 
Sbjct: 250 ---------RLSIAACSLGGGRAALDKSLGYVHERSAFGSKLSDFQVLRFKLADMATELE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R A + D      ++ +  R+ A + K        AV  EA++  GG GY+ E
Sbjct: 301 AARMLLWRAAWALD-----VKDPSATRLCA-MAKRLATDAGFAVANEALQIHGGYGYLAE 354

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             + +  R+   + IL G+   M L
Sbjct: 355 YGLEKIVRDLRVHQILEGTNEIMRL 379


>gi|119896685|ref|YP_931898.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119669098|emb|CAL93011.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 377

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----C 255
           LTE   G+D +A+ +   +  D  + L+G K F+++   +D  I+ A  +   G     C
Sbjct: 123 LTEPHVGSDASALRTTAVRDGDD-WVLNGVKQFITTGREADVAIVFAVTDKAAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           F+VP      +  G    R++ K+G +++ T ++ F N       LLG       ++   
Sbjct: 182 FIVPT-----ATPGYIVARIEEKMGQKASDTAQILFENCRVPADALLGAEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A   +   R +L  A+ YA+ R   G  + +   +   +AD+A  + A
Sbjct: 237 LEAGRIGI----ASQCLGMARAALEAAVKYAQERETFGKPIFEHQAVNFRLADMATQLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  D  +   +EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 293 ARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAEKVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRVCQIYEGASD 365


>gi|119718511|ref|YP_925476.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539172|gb|ABL83789.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 18/249 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++ A + ++ ++   G + L G K W  +  ++D  ++ A
Sbjct: 122 PRMAAGEAIGCFGLTEPDFGSNPAGMRTRARQEPSGDWVLDGTKMWITNGSVADVAVVWA 181

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           Q EG +  F+VP         G     +K K+  R++ T EL           +L +++ 
Sbjct: 182 QTEGGIRGFVVPT-----DTPGFSAPEIKKKMSLRASVTSELVLDGVRLPADAVLPEVSG 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +GP+  +    +   A  +V   R  L  AI Y R R +    L    + +  +AD+ L
Sbjct: 237 LSGPLSCLNEARF-GIAFGAVGAARDCLETAIAYTREREIFDKPLAAYQLSQAKLADMTL 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++  A  L+ +L    DE + R E+ +  ++          + A A+  E+   +G +G 
Sbjct: 296 ELGKAMLLALQLGRLKDEGRLRPEQVSLGKLN-------NVREALAIARESRTLLGAAGI 348

Query: 425 IEERSIARH 433
             E  + RH
Sbjct: 349 TLEYPVLRH 357


>gi|119387117|ref|YP_918172.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377712|gb|ABL72476.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 403

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K   G Y L+G K W  ++P++D F++ A+ E   G+V  
Sbjct: 145 FGLTEPDAGSDPAGMRTVARKTGGG-YVLNGSKMWISNAPIADVFVVWAKSEAHGGKVRG 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +L+ G+P GL   ++K K+  R++ T E+   N       LL ++    GP    
Sbjct: 204 F----VLDKGTP-GLSAPKIKGKLSLRASITGEIVMENVEVGEDALLPNIEGMGGP---- 254

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   RH     L    + ++ +AD+  +IA
Sbjct: 255 --FGCLNRARYGISWGAMGAAEDCWFRARQYGLDRHQFNRPLAATQLYQKKLADMQTEIA 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+   FDE K       +A  M  I K   C  A  +  +A +  GG+G    
Sbjct: 313 LGLQASLRVGRLFDEGK-------FAPEMISIVKRNNCGKALEIARQARDMHGGNGIQIG 365

Query: 428 RSIARH 433
             + RH
Sbjct: 366 YHVMRH 371


>gi|332662453|ref|YP_004445241.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331267|gb|AEE48368.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 381

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 30/274 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D   +    ++  D  Y ++G K F++   S     +A V  R G  L   
Sbjct: 124 GLTEPNTGSDAGRMKCVAERDGD-YYVINGSKNFITHGASGN---VAVVIVRTGELLDSH 179

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
                ++E G+P G    + +NK+G R++ T E+ F N       +LG+     G ++ M
Sbjct: 180 GMSAFVVERGTP-GFLAGKKENKLGMRASETAEMIFDNCRVHKSQMLGE--EGEGFIQSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           KIL   D   +S++ + + +A      ++ Y++ RH  G  + +   +   +AD+A  I 
Sbjct: 237 KIL---DGGRISIAALSLGIARGAYLASVKYSKERHQFGQAIANFQAISFKLADMATKIE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+  L  +     D  ++ ++       ++ + KY+  + A  V  +A++  GG GYI++
Sbjct: 294 ASELLVRKAGELKDLGQNVTK-------LSAMAKYFASETAVEVSTDAVQIHGGYGYIKD 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             + + YR++   +I  G+     L +   + KG
Sbjct: 347 FPVEKFYRDAKLCTIGEGTSEIQKLVISREILKG 380


>gi|209964651|ref|YP_002297566.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209958117|gb|ACI98753.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 380

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++ +++ D  Y L+G K F+S +  +D +I++ +  G     +   
Sbjct: 124 LTEPGSGSDAASLRTRAERVGD-HYVLNGTKAFISGAGATDLYIVMCRTGGPGPKGISAL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P GL + + + K+G  S  T ++ F        N  G        +   ++  +
Sbjct: 183 VVEKGTP-GLSFGKKERKMGWNSQPTAQVIFEDCRVPVENRLGEEGEGFRFAMKGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I    A  S+ G R  L  A  +   R   G  + +   ++  +AD+A ++ AA  + 
Sbjct: 242 INI----AACSLGGARTCLELARDHMTARQQFGRPIAEFQALQFMLADMATELDAARLMV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A++ D           A     + K +   +   V  +A++  GG GYI+E  + R 
Sbjct: 298 HRAADALDRGDPE------ATTFCAMAKRFATDIGFKVCNDALQLHGGYGYIKEYPVERF 351

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461
            R+   + IL G+   M + V   L  G
Sbjct: 352 VRDLRVHQILEGTNQVMRMIVARRLLAG 379


>gi|206561535|ref|YP_002232300.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
           J2315]
 gi|198037577|emb|CAR53514.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
           J2315]
          Length = 395

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 24/243 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A++E      + 
Sbjct: 136 FGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKLEENGKDAIR 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL    +  K+G R++ T E+     F     L+ +++   GP       
Sbjct: 195 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPDENLMPNVSGLRGP------F 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AE+  +  R++V      G  L    ++++ +AD+  +I    
Sbjct: 248 TCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGL 307

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  +
Sbjct: 308 QGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 360

Query: 431 ARH 433
           ARH
Sbjct: 361 ARH 363


>gi|169632452|ref|YP_001706188.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151244|emb|CAO99930.1| acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 593

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/392 (21%), Positives = 159/392 (40%), Gaps = 51/392 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365
              I  +     +   A  YA    + R  +G          IL+   V +R + ++  +
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATARLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509
                +  ++D ++    E + + +F+ E+ A
Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508


>gi|57525201|ref|NP_001006193.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus
           gallus]
 gi|53130416|emb|CAG31537.1| hypothetical protein RCJMB04_7j20 [Gallus gallus]
          Length = 416

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 34/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +  
Sbjct: 158 LSEPGNGSDAGAASTVARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGISA 216

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           FLVP         GL   + ++K+G R+++T  L F +       LLG L +        
Sbjct: 217 FLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMG------F 265

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+A     + YA +R   G  +     ++  +AD+A+ +
Sbjct: 266 KIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAIQFKLADMAVAL 325

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K  ++EAA A++ A        + A  +  +A++ +GG GY+ 
Sbjct: 326 ESARLLTWRAAMLKDNGKPFTKEAAMAKLAA-------SEAATNIAHQAIQILGGMGYVT 378

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E    RHYR++    I  G+     L +   L K
Sbjct: 379 EMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 412


>gi|260551298|ref|ZP_05825499.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405612|gb|EEW99103.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 375

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D  AI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|111222212|ref|YP_713006.1| butyryl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111149744|emb|CAJ61436.1| Butyryl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 382

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           L+E   G+D AA+T+  +   DG Y LSG K W      +D + + A+      G + CF
Sbjct: 127 LSEPHAGSDPAAMTTAARPDPDGGYRLSGTKAWVTHGGAADFYTVFARTSEDRSGGISCF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LV     D    G+     + K+G  ++ T ++ F      +  D  + T        L 
Sbjct: 187 LV-----DAGTAGMDVHPPERKMGLTASPTTQIGFDAAP--VPADRLIGTEGNGLRIALA 239

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++   V LA+     A+ YA+ R   G  +ID   +   +AD+A  + +A A
Sbjct: 240 ALDAGRLGIAAAAVGLAQRALDDAVAYAKERQAFGKAIIDHQGLGFLLADMAAAVESARA 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +   A   D      + A+ A+++A             V  +A++  GG+GY ++  + 
Sbjct: 300 TTLAAARRRDAGLPAGKAASIAKLVA-------TDAVMKVTEDAVQVFGGAGYTKDYPVE 352

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R+ RE+    I  G+     L +   L +G
Sbjct: 353 RYMREAKIMQIFEGTNQIQRLVISRHLARG 382


>gi|126432845|ref|YP_001068536.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126232645|gb|ABN96045.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 611

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 48/371 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG     +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +     +++ +      A+ YA+ R V G             
Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR-IMAPI 399
             +   P ++R++           AL    A   D A ++      SE A     +M PI
Sbjct: 343 VTITHHPDVRRSLMTQKSYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457
            K    + A A + E+++  GGSG++++  I ++ R++  +S+  G+      D     +
Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462

Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514
           +         +   +EQ + S SG   +   R  ++   ED + +A  LT  + A   + 
Sbjct: 463 VRDKGQALAYVAGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENP 522

Query: 515 AALYRAGMNDI 525
           A LY+ G+  +
Sbjct: 523 AELYKVGLGSV 533


>gi|91977574|ref|YP_570233.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684030|gb|ABE40332.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 375

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + +  ++  D  Y ++G K F++S  +   I++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGKNGQLIIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R+++K+G  S+ T +L F++    L  DL +     E +
Sbjct: 179 ITAFIVPT-----DTPGFEVVRVEHKLGQHSSDTCQLAFNDMR--LPADLRLGA-EGEGL 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEVARDYARERITFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAA  +    A+  +       EA+ A+++A        + A AV + A++ +GG GY+ 
Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLLA-------SEAAEAVCSAAIQTLGGYGYLN 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +  + R YR+     I  G+ +
Sbjct: 344 DFPLERIYRDVRVCQIYEGTSD 365


>gi|304311073|ref|YP_003810671.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796806|emb|CBL45018.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 596

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 143/359 (39%), Gaps = 64/359 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + G+D+  + ++ +  +DG Y ++G K 
Sbjct: 149 YLPKLVSAEWTGT-------------MCLTEPQAGSDVGLVKTRAEPENDGSYRITGTKI 195

Query: 234 FLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGLCYQRLKN 277
           F++   +D       ++LA++    +G  G   F+VP+ L     E GS N +    L+ 
Sbjct: 196 FITQGENDYSTNIIHLVLARLPDAPKGPKGISLFIVPKFLPTPKNEPGSRNAVSCGALEK 255

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++ T  L F    G+++G  N     +  M     LD  I  +    +S   A+ 
Sbjct: 256 KMGLKASPTCVLNFDGATGWMIGSPNGGLAAMFTMMNAARLDVGIEGLGAAELSFQGALA 315

Query: 338 YARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381
           YAR R                  +I  P ++R +           AL++ +A + D    
Sbjct: 316 YARERLQMRAPTEPVCPEKPADPIIAHPDVRRMLMTQKALSEGCRALAYSIALALDTQDH 375

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                + + A    ++ PI K +            ++  GG GYI E  + +        
Sbjct: 376 ASGDVKKQAADLIALLTPINKAFLTDRGLECANYGVQVFGGHGYICENGMEQ-------- 427

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
                    +V DV + L+ +GTN  +       +  GS GK V   +  + + C  +K
Sbjct: 428 ---------IVRDVRIALIYEGTNGIQANDLIGRKLAGSRGKLVFDYIDQAEAFCLGNK 477


>gi|163761042|ref|ZP_02168120.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281823|gb|EDQ32116.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 593

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 191/469 (40%), Gaps = 78/469 (16%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWDK-VEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+  G   G    D  V   P W  L R  I  G + 
Sbjct: 31  LGEDLVDAILAEAGRFATDQIAPLNEIGDTHGAVLEDAAVTTPPGWKELYRNWIDGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWA 175
                 F          + A  ++    L  G  + P++T  ++ AL    T  +   + 
Sbjct: 91  LTGPEEFGGQGLPMLLSVAALEMWNSGSLAFG--IGPTLTMGAVEALEKHATDELKARYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            ++ + E+  T             + LTE + G+D+ A+ ++ + + DG Y + G K ++
Sbjct: 149 EQLVTGEWMGT-------------MNLTEPQAGSDLNALKARAEPVGDGTYRIFGQKIYI 195

Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278
           +      +D  I L         A   G +  FLVP+    +DGS    N +    L++K
Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFFVGDDGSLGARNDVFCSGLEHK 254

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G  ++ T  + + +          G+L+G+ N     +  M     +++A ++V    V
Sbjct: 255 LGIHASPTCTMIYGDGKFGDQPGAIGWLIGEENRGLACMFTM-----MNNARLAVGMQGV 309

Query: 331 SLAE-----AIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRL 376
           ++AE     A+ YAR R           G+  +I+ P + R +  +      A A+ +  
Sbjct: 310 AIAETAYQKALAYARERTQGRAPGFKGEGMSPIIEHPDVARMLMTMKALTQGARAICYSC 369

Query: 377 ANSF--------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A +         DEAK+ +E A+   ++ PI K +   +   V +  ++  GG G+IEE 
Sbjct: 370 AEALELARVSEGDEAKAWAERAS---LITPIAKAFATDIGMEVASLGVQVHGGMGFIEET 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475
             AR+ R++    I  G+     +D++   L   G +  + L S  + D
Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVMRKLPLSGGDTVKALISDFKAD 475


>gi|268568006|ref|XP_002640134.1| Hypothetical protein CBG12633 [Caenorhabditis briggsae]
          Length = 421

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 36/281 (12%)

Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           S AIG   L+E   G+D  A+ +  +K  D  + +SG K W  ++  +  F++ A  +  
Sbjct: 154 SEAIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANADPS 212

Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
            G     CFLV R  E     G+   + ++K+G RS +T  + F N       +LG+   
Sbjct: 213 KGYKGITCFLVDRNQE-----GVSVGKKEDKLGIRS-STCSVHFDNVRVHKSAILGEYG- 265

Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                +  K  I  L++  + +    + LA+      I Y ++R   G  LID   M+  
Sbjct: 266 -----KGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQ 320

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           I  + ++I AA  L +  A   +       EAA A++ A        ++A    ++ +E 
Sbjct: 321 IGQVRMEIEAARLLVYNAARMKENGLPFVREAAMAKLFA-------SQVATTATSKCVEW 373

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +GG G+ +E  + + YR+S   +I  G+ N  +  +  L++
Sbjct: 374 LGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 414


>gi|332969068|gb|EGK08107.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 395

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 116/257 (45%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   DG Y L+G K W  + P +D  ++ A+    +G   +
Sbjct: 128 LAMSEPGAGSDVTSMKLRAEA-KDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGPKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T E+ F+N F   + + N+  G    +++L+  
Sbjct: 187 TAFLVEKGMEGFGTAQKLDKLGMRGSHTGEMTFNNVF---VPEENIMGGLNNGVQVLMSG 243

Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              + A+++   V  M+  +   I Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 244 LDYERAVLAAGPVGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAGRSF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + +  + D    R   A ++R +         WC + A  +  E ++  GG+GY  E  
Sbjct: 304 LYTVGKNLDLLDQRG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRFWRDAKLYEIGAGT 378


>gi|298484981|ref|ZP_07003079.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298160535|gb|EFI01558.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 600

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 145/343 (42%), Gaps = 66/343 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247
           + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + +          
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKLPDAPG 221

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F +     G+L+
Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGKHNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLV 280

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352
           G     L+     + + +I + L + ++  SG   SL     YAR R    G L D    
Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--PQGRLPDSKSP 334

Query: 353 ---PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396
              PV       ++R +      +  A  L    +  FD+ ++   E A         ++
Sbjct: 335 ESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLL 394

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L 
Sbjct: 395 TPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
                          L Q+ G+  K+++ ++ D+   C+  +G
Sbjct: 455 -------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481


>gi|289669926|ref|ZP_06491001.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 138/311 (44%), Gaps = 43/311 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++  +     D  
Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  + P +D  ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 211

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL F+       N  G L G + V    ++  ++++      +  + M V L    
Sbjct: 212 SNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+ + + A  A  + +A + D  ++  ++AA A + 
Sbjct: 269 -YVHERKQFGEPIGSFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A     W       +  +A++ +GG+GYI +    R +R++    I  G+G + +  +L 
Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377

Query: 457 LLEKGTNLFEQ 467
               G  LFE+
Sbjct: 378 ---IGRELFER 385


>gi|238505142|ref|XP_002383800.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus
           NRRL3357]
 gi|220689914|gb|EED46264.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus
           NRRL3357]
          Length = 430

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 27/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  +++ DG Y L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLLSGDKIGALAMSEHSAGSDVVSMKTTAKEV-DGGYVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E + G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPQKGSKGITAFVVEKTFAGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG++N        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 262 PKENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   + A+ A ++  A   D + S SE +   +  A    Y   + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASLSEVSIRTQDCAGAILY-AAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413


>gi|158318151|ref|YP_001510659.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158113556|gb|ABW15753.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 381

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           L+E   G+D AA+        DG Y L+G K W      +D + + A+      G + CF
Sbjct: 127 LSEAHAGSDPAAMRVTATATDDG-YLLNGTKAWVTHGGAADFYTVFARTSSDTRGGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           LV    + G+PN + +   + K+G  ++ T ++ F +       L+G +       + + 
Sbjct: 186 LV----DAGTPN-IRFHPPEKKMGLTASPTTQISFDDVAVPASRLIGKVG------QGLS 234

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  LDS  + ++   V L +     A+ YA+ R   G  +ID   +   +AD+A  + 
Sbjct: 235 IALSALDSGRLGIAATAVGLGQRALDDAVAYAKEREAFGKAIIDHQGLGFLLADMAAAVE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A A +   A   D        A+ A+++A          A  V  +A++ +GG+GY ++
Sbjct: 295 SARATTLAAARRRDAGLQYGRAASVAKLVA-------TDAAMKVTEDAVQVLGGAGYTKD 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             + R+ RE+    I  G+     L +   L +G
Sbjct: 348 FPVERYMREAKVMQIFEGTNQIQRLVISRHLARG 381


>gi|145548916|ref|XP_001460138.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427966|emb|CAK92741.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 16/253 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ S  +K+ D  Y L+G K W  + P+SD  I+ A+ E       +
Sbjct: 141 LAMSEPNAGSDVVSMKSTAKKVGDK-YILNGSKMWITNGPISDILIVYAKTEPEKKQHGI 199

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +KIG + + T  + F N       +LG++N   G    M  L
Sbjct: 200 TAFIVEANMKGFSKGKKLDKIGMKCSDTGPIYFDNVEIPAENVLGEVN--QGVYVLMSGL 257

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  L  A   V  M+ +   +  Y   R   G  +    +M++ +A++   + A+ A+ 
Sbjct: 258 DYERLVLAAGPVGLMQAAFDISRDYCNTREQFGKKIGQFQMMQQKLAEMYTTLQASRAML 317

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + D+    + + A A I      Y+    A  V  EA++C+GG+GY +E  + R 
Sbjct: 318 YSVARAVDQGNITNTDCA-ALI------YYTSANATQVGLEAIQCLGGNGYTKEYPVGRI 370

Query: 434 YRESPANSILLGS 446
             +S    I  G+
Sbjct: 371 MLDSKLYEIAAGT 383


>gi|153206796|ref|ZP_01945637.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218459|ref|YP_002305246.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154]
 gi|120577159|gb|EAX33783.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012721|gb|ACJ20101.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  + ++  D I+ L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E   P     Q+L +K+G R + T EL F +       +LG+LN     +  M  
Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L Y  L      +  M+  L   + Y   R      + +  +++  IAD+   + A+ A 
Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  K  S++AA A + A        + A  V  +A++C+GG+GYI E  + R
Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 356 FLRDAKLYEIGAGT 369


>gi|312131646|ref|YP_003998986.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311908192|gb|ADQ18633.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 372

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 20/252 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
           GLTE   G+D   + +  +K  D  Y L+G K F++  + SD  +++A    R G  +  
Sbjct: 122 GLTETFSGSDAGGMRTVAEKDGD-YYVLNGSKNFITHAISSDVAVVIA----RTGKEMSA 176

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            ++E G+P G    + +NK+G R++ T  L F N    +  D  +        + L  LD
Sbjct: 177 FIIEKGTP-GFSAGKKENKLGMRASETACLFFDNC--RVHKDQRIGDEGTGFKQALQLLD 233

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +S++ + + +A      A+ YA+ R   G  + D   +   +A++A  I AA  L  
Sbjct: 234 GGRISIAALSLGIARGAYECALKYAKEREQFGKPIFDFQAISFKLAEMATKIEAAELLCR 293

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A+  D       +A        + K +  + A  V  E+++  GG GY ++    + +
Sbjct: 294 QAAHFKDNGGGNVSKA------GAMAKLFASETAVEVATESVQIHGGYGYTKDYPAEKFF 347

Query: 435 RESPANSILLGS 446
           R+S   +I  G+
Sbjct: 348 RDSKLCTIGEGT 359


>gi|293611198|ref|ZP_06693496.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826449|gb|EFF84816.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 375

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D  AI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|228994061|ref|ZP_04153962.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228765709|gb|EEM14362.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 381

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +D +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKQGDH-YVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   PVE++        
Sbjct: 188 FIVEKDTPGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     + YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKICEIYEGT 369


>gi|15616360|ref|NP_244665.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176423|dbj|BAB07517.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 380

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 18/276 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D A + +      D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAANMKTTAVLEGDD-YILNGSKIFITNGGIADIYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E       V   + +    G    + + K+G RS+ T E+ F +     +   N+    
Sbjct: 172 TEPEKRHKGVSAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI ++ LD     ++   V +A+     A+ YA  R   G  +  Q  +   +AD+
Sbjct: 229 GDGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVAYANERKQFGKPIGQQQGIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + A+  L+++ A    E  S  +E+A +++ A  T       A  V  EA++  GG 
Sbjct: 289 ATKVEASRLLTYQAAWRESEGLSYGKESAMSKLFAGDT-------AMDVTVEAVQVFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY +E  + R+ R++    I  G+     L +  +L
Sbjct: 342 GYTKEYPVERYMRDAKITQIYEGTNEIQRLVISKML 377


>gi|88859250|ref|ZP_01133890.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata
           D2]
 gi|88818267|gb|EAR28082.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata
           D2]
          Length = 385

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 26/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ ++ +K  D  Y L+G K F+S +  ++  +++A+  G     +  F
Sbjct: 124 LTEPGSGSDAASLKTKAEKQGDN-YVLNGSKMFISGAGETEVLVVMARTGGEGAAGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP         G+ Y + + K+G  +  T  + F N    ++   N+     E  K  +
Sbjct: 183 VVP-----ADAKGVIYGKAEEKMGWNAQPTRLITFENV---IISQDNLLGQEGEGFKFAM 234

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+   + +L  A +Y + R   G  L     ++  +AD+  ++ AA 
Sbjct: 235 QGLDGGRINIATCSIGTAQQALNTAKNYMQEREQFGKPLAAFQALQFKLADMNTELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  RLA +F   ++  E+ AY      + K +   +   V  +A++  GG GYI+E  +
Sbjct: 295 HM-VRLA-AFKLDQNDPEKTAYC----AMAKRFATDVGFKVCDDALQIHGGYGYIKEYPL 348

Query: 431 ARHYRESPANSILLGSGNAMVLDV 454
            RH R+   + IL G+   M L V
Sbjct: 349 ERHVRDVRVHQILEGTNEIMRLIV 372


>gi|331697784|ref|YP_004334023.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952473|gb|AEA26170.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 600

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 53/303 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           L+E + G+ ++ +T++ +   DG Y L+G K ++S     +S+  +  +LA+V G     
Sbjct: 166 LSEPQAGSSLSDVTTRAEPQPDGTYRLTGTKMWISGGDHELSENIVHLVLARVPGSPPGV 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295
             +  F+VPR L   DGS    N +    L +K+G R      L F          +   
Sbjct: 226 KGISLFVVPRFLVAPDGSIGERNDVVLAGLNHKMGYRGTVNTLLNFGEGRHTPGGRAGAV 285

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
           G+L+G+ N     +  M     ++ A + V     +L       A+ YAR R     +  
Sbjct: 286 GYLVGEQNRGLAQMFHM-----MNEARVGVGAGATALGYAGYLHALDYARSRPQGRPVAA 340

Query: 351 DQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----- 394
             P            +KR +      +  A AL    A   DE ++  + A   R     
Sbjct: 341 KDPAAPQVPIIAHADVKRMLLASKSYVEGALALVLYCARLLDEEQTADDPADRERAHLLL 400

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K W  +   A    A++  GG GY  E  + + YR++  N+I  G+     +D
Sbjct: 401 EMLTPVAKSWPAQWCLAANDLAIQVHGGYGYTREYDVEQLYRDNRLNAIHEGTHGIQAID 460

Query: 454 VLN 456
           +L 
Sbjct: 461 LLG 463


>gi|306840952|ref|ZP_07473693.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306289009|gb|EFM60274.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 460

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 200 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 258

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 259 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 312

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 313 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 372

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 373 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 425

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 426 IERFYRD 432


>gi|157104649|ref|XP_001648505.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108880278|gb|EAT44503.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 404

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  +++ ++ A  +       +
Sbjct: 144 FALSEPGNGSDAGAASTVAVLKGD-RWVLNGTKCWITNAYEAESAVVFATTDKSLKHKGI 202

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR       +G    + ++K+G R ++T +L F +     +   N+   P    K
Sbjct: 203 SAFIVPR-----GASGFTLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGFGFK 254

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++   + +A+A     + YA +R   G  +     +++ IAD++L++ 
Sbjct: 255 IAMQTLDAGRIGIASQALGIAQASLECAVDYANKRIAFGKPISKLQAIQQKIADMSLNLE 314

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++EAA A++ A     +C         + ++ +GG GY+ +
Sbjct: 315 SARLLTWRAAWLKDNKKPYTKEAAMAKLAASEAATFCSH-------QCIQVLGGMGYVSD 367

Query: 428 RSIARHYRESPANSILLGS 446
               RHYR++    I  G+
Sbjct: 368 MPAERHYRDARITEIYEGT 386


>gi|120406664|ref|YP_956493.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119959482|gb|ABM16487.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 464

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 141/332 (42%), Gaps = 58/332 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P     WAP+ F    D      ++  ++AI    +E  GG+D+  + +  +
Sbjct: 96  SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145

Query: 220 KI---SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270
           +    +D  + + GHK W  +  ++D  ++ A V+  +G      F+VP     G+P GL
Sbjct: 146 RAGPGADADWIIDGHKMWIGNGGIADVHVVNAVVDQELGHKGQALFIVP----GGTP-GL 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306
              R  +K+G R++ T EL+ +        LLG                       + + 
Sbjct: 201 DMVRKLDKLGCRASHTAELKLTGVRVPADHLLGGQEKLDHKLARAREAIEGARHSGSATL 260

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G  E  + ++    A  ++   R +L     YA RR   G  +ID   +   +AD+A  +
Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGAPIIDNQGISFPLADLATGL 316

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++R   S+  A        + R    ++K    ++A      A++ +GG GY++
Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAVQTMGGWGYVK 370

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + + YR++   +I  G+     + + N L
Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRMVISNAL 402


>gi|212212590|ref|YP_002303526.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212]
 gi|212011000|gb|ACJ18381.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  + ++  D I+ L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E   P     Q+L +K+G R + T EL F +       +LG+LN     +  M  
Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L Y  L      +  M+  L   + Y   R      + +  +++  IAD+   + A+ A 
Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  K  S++AA A + A        + A  V  +A++C+GG+GYI E  + R
Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVAIQAIQCLGGNGYITEFPVER 355

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 356 FLRDAKLYEIGAGT 369


>gi|209548161|ref|YP_002280078.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533917|gb|ACI53852.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 592

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 186/430 (43%), Gaps = 69/430 (16%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +E+A +A+    Q  A   GGE    V     W  L R  I  G +      +F    + 
Sbjct: 49  EEVAPLADIGDRQ-GARLEGGE----VRLPDGWRDLYRSWIAGGWNGLTAPEAFGG--QA 101

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNK 188
             H +  A L +         ++P++T  ++ A+ T  +  + + +  K+ S E+  T  
Sbjct: 102 LPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGT-- 159

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   G+D+  + ++ ++ +DG Y + G K F++    DA      
Sbjct: 160 -----------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIH 208

Query: 244 IMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++         +  FLVP+ L  +DGS    N L    L++K+G   + T  + + 
Sbjct: 209 LVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGIHGSPTCTMIYG 268

Query: 293 N--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA 339
           +          G+L+G+ N     +  M     +++A ++V    V++AEA     + YA
Sbjct: 269 DGRFGDEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKAVAYA 323

Query: 340 RRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           + R        SG G+  +++ P + R +  +      A A+S+  A++ D +    + +
Sbjct: 324 KERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHAIDMSHRAGDVS 383

Query: 391 AY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +    A ++ PI K +       V +  ++  GG G+IEE   AR+ R++    I  G+
Sbjct: 384 RHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGT 443

Query: 447 GNAMVLDVLN 456
                +D++ 
Sbjct: 444 NGIQAIDLVT 453


>gi|172059771|ref|YP_001807423.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171992288|gb|ACB63207.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 395

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D   + ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEEDGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               LL +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|221067817|ref|ZP_03543922.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712840|gb|EED68208.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 384

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 31/312 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + S    +A  +    TP   + W PK+ S E             +  G+ +TE   G+D
Sbjct: 91  ITSVHTITAHYLDTYGTPEQKQRWLPKLCSGE-------------LLAGIAMTEPSVGSD 137

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNG 269
           + A+ ++ Q+  D  Y ++G K F+++  +   +++A   G  G   V  + LE  +  G
Sbjct: 138 LKAMRTRAQRDGDH-YVINGSKTFITNGCTANLLVVAVRTGEAGSAGVSLVVLETENLPG 196

Query: 270 LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R   KIG   + T EL F +       LLG +    G  + M  L Y +  ++ VS
Sbjct: 197 FRVGRRLGKIGQHISDTAELFFEDLNIPASHLLGGIE-GQGFKQLMSQLPY-ERMLLGVS 254

Query: 327 GMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                       + Y ++R   G  + D    +  +A+ A    A    SF      ++ 
Sbjct: 255 AAAAIEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSF-----VNDC 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R  +       A + K+WC +    V+ E ++  GG GY+EE  I R Y ++    I 
Sbjct: 308 IQRLLDGTLENEAAYMAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIGRMYADARIQKI- 366

Query: 444 LGSGNAMVLDVL 455
            G  N ++ D++
Sbjct: 367 YGGANEIMKDLI 378


>gi|229074975|ref|ZP_04207980.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|228708148|gb|EEL60316.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 569

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 42/328 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   D+A   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478
           L V  +L K     EQ+ +T +E D+ +
Sbjct: 403 LTVAKMLMKQ---IEQIEATEVEIDIAT 427


>gi|262196959|ref|YP_003268168.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080306|gb|ACY16275.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 386

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 40/317 (12%)

Query: 143 MAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +A+ +A   ++ SVT+  A++VA + +    K   P++    Y            V    
Sbjct: 76  LARADASVAVAVSVTNMVAALVAQVGSEAQRKQHVPRLVDGSY------------VCGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----C 255
            L+E + G+D +A+ +   +   G       +W      +   ++ A  +   G      
Sbjct: 124 ALSEPQAGSDPSAMRTSATRTGSGWRLRGSKQWITGGDRAGVMVVWAVTDAEAGNRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP     G   GL   R ++K+G   + TV L F +     +G+  +     E  K+ 
Sbjct: 184 FLVP-----GGAAGLSVSRSEDKMGLHGSTTVGLSFDDVE---VGEDALLGREGEGFKLA 235

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD   + +S   + +AE     A+ YA  R   G  +     + + +AD A  + AA
Sbjct: 236 MMALDGGRIGISSQAIGIAEGALDAAVAYACERVQFGKPIGQHQGVSQMLADAATWLDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+ R A   DE K  S+EA+ A++ +       C +       A++  GG GY  +  
Sbjct: 296 KLLTLRAAARKDEGKPFSQEASMAKLFSTEHAGRICDI-------ALQVHGGYGYTRDFP 348

Query: 430 IARHYRESPANSILLGS 446
           + R YR+     I  G+
Sbjct: 349 VERAYRDVRVTRIYEGT 365


>gi|169794773|ref|YP_001712566.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184159454|ref|YP_001847793.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213157899|ref|YP_002320697.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482317|ref|YP_002324499.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239501701|ref|ZP_04661011.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301347102|ref|ZP_07227843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB056]
 gi|301510411|ref|ZP_07235648.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB058]
 gi|301597306|ref|ZP_07242314.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB059]
 gi|332852224|ref|ZP_08434029.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332870446|ref|ZP_08439210.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332876296|ref|ZP_08444071.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169147700|emb|CAM85563.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|183211048|gb|ACC58446.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193078319|gb|ABO13293.2| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978]
 gi|213057059|gb|ACJ41961.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986221|gb|ACJ56520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|322509368|gb|ADX04822.1| acdA [Acinetobacter baumannii 1656-2]
 gi|323519392|gb|ADX93773.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729354|gb|EGJ60694.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332732183|gb|EGJ63451.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332735568|gb|EGJ66620.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 593

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 51/392 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365
              I  +     +   A  YA  R               +  IL+   V +R + ++  +
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509
                +  ++D ++    E + + +F+ E+ A
Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508


>gi|89902601|ref|YP_525072.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347338|gb|ABD71541.1| isovaleryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
          Length = 392

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 21/276 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +T + +    G Y L+G K W  + P +D  ++ A+ +  +G   V
Sbjct: 128 LAMSESGAGSDVLGMTLKAED-KGGFYLLNGSKMWITNGPDADTLVVYAKSDPELGARGV 186

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E G P     Q+L +K+G R + T EL F+N       +LG LN   G    M  
Sbjct: 187 SAFLIEKGMPGFSVAQKL-DKLGMRGSHTGELVFNNVEVPAQNILGGLN--NGAKVLMSG 243

Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L Y + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+   + A  A
Sbjct: 244 LDY-ERAVLTGGPLGIMQAVMDNVMPYIHDRKQFGQSIGEFQLIQGKVADLYTVLQAGRA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            ++ +A + D     +E     R        W  + A  +  E ++  GG+GYI E  + 
Sbjct: 303 FAYTVAKNLDLLG--AEHVRQVRKDCASVILWTAEKATWMAGEGVQIFGGNGYINEYPLG 360

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           R +R++    I  G+G + +  +L     G  LF Q
Sbjct: 361 RLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390


>gi|190895532|ref|YP_001985824.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
 gi|190699477|gb|ACE93561.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 395

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ +K+ DG Y L+G K W  ++P++D F++ A+ E G +  F 
Sbjct: 138 FGLTEPDHGSDPGSMATRARKV-DGGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGF- 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              +LE G   GL    +  K+G R++ T E+     F   + + N+  G          
Sbjct: 196 ---ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTC 248

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A +I+     
Sbjct: 249 LNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQG 308

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL    +E     E       +  I K   C  A  +   A + +GG+G  +E  IAR
Sbjct: 309 CLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361

Query: 433 H 433
           H
Sbjct: 362 H 362


>gi|83646653|ref|YP_435088.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83634696|gb|ABC30663.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 389

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 39/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + + PK+ S E+              IG L ++E   G+D+ ++  Q  K  D  
Sbjct: 110 TPEQRQKYLPKLISGEH--------------IGALAMSEPNAGSDVVSMKLQAVKKGDK- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P +  +++ A+ + + G   +   + +    G       +K+G R +
Sbjct: 155 YVLNGAKMWITNGPDAHTYVIYAKTDVQAGPRGITAFIVERDYPGFSRSPKLDKLGMRGS 214

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS-----AIMSVSGMRVSLAEAIHY 338
            T EL F N     + + N+  G  + +K+L+  LD      A   +  M+  +   + Y
Sbjct: 215 NTCELVFDNC---EVPEENILGGLNQGVKVLMSGLDYERVVLAAGPIGIMQACMDAVVPY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +    +++  +AD+   + A  A  + +A + D  ++  ++AA   +   
Sbjct: 272 IHEREQFGQPIGQFQLIQGKVADMYTTLNACRAYLYAVAAACDRGETTRKDAAGVIL--- 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +C + A  +  +A++ +GG+GYI E S  R  R++    I  G+G + +  +L   
Sbjct: 329 ----YCAEKATQMALDAIQILGGNGYINEFSTGRLLRDAKLYEI--GAGTSEIRRML--- 379

Query: 459 EKGTNLFEQ 467
             G  LFE+
Sbjct: 380 -IGRELFEE 387


>gi|294667775|ref|ZP_06732985.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602401|gb|EFF45842.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 387

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RYVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI +   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|52082252|ref|YP_081043.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52787644|ref|YP_093473.1| MmgC [Bacillus licheniformis ATCC 14580]
 gi|52005463|gb|AAU25405.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52350146|gb|AAU42780.1| MmgC [Bacillus licheniformis ATCC 14580]
          Length = 376

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGC 255
           LTE   G+D  ++ ++ +K  D  Y L+G K F+++   +D +++ A  +     G +  
Sbjct: 124 LTEPSAGSDAGSLKTRAEKRGD-TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V    E G+P G    + + K+G   + TV L F N              GF +   N
Sbjct: 183 FIV----EKGTP-GFFIGKNEEKMGLHGSLTVTLNFDNAVIPARQLLGEEGMGFKMALSN 237

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + TG +           A  ++     +L+EA+ + ++R+  G +  +   +   +AD+A
Sbjct: 238 LDTGRI---------GIAAQALGIAEGALSEAVQFLKKRYPDGELYKNGQALAFKLADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L ++ A+   +     + A+ A++ A  T  +       V  EA++ +G  G
Sbjct: 289 ARTEAARLLVYQAASLKQQGMQTGKAASMAKLFASETAMY-------VAGEAVQLLGDFG 341

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y ++ S  R++R++    I  G+
Sbjct: 342 YTKDFSAERYFRDAKVCEIYEGT 364


>gi|323524561|ref|YP_004226714.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381563|gb|ADX53654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 376

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNAQVAIVMAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
             +      +  F+VP        +G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DSSGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A   D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAAALKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|164660180|ref|XP_001731213.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966]
 gi|159105113|gb|EDP43999.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966]
          Length = 446

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 45/284 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+ +  +K  DG  Y ++G K W  +S  ++ FI+ AQ +   G     
Sbjct: 187 LSEPNSGSDAFAMKTTVKKSDDGSHYIINGSKMWITNSAEAEFFIVFAQGDASKGYKGIS 246

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F V + +      G+   + ++K+G R+++T  + F         ++ V   P E++  
Sbjct: 247 AFAVEKDM------GVEIAKKESKLGIRASSTCTVNFD--------EVKV---PAENLIG 289

Query: 313 ------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                 KI I  L+   + +    V LA+     A+ Y   R   G  +     M+  +A
Sbjct: 290 EEGKGYKIAIEILNEGRVGIGAQMVGLAQGAFDRALAYTFERQQFGKPIAKFQGMQFQMA 349

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            IA +I AA  + +  A   +E +  +++AA A++       +  + A      A+E  G
Sbjct: 350 QIATEIEAARLMVYNAARLKEEGRPFTKQAAMAKL-------YSSQAAERAAGRAIEWCG 402

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           G G+  E+ I +++R+S   +I  G+ N  +  + NL  K   L
Sbjct: 403 GQGFTREQGIEKYWRDSKIGAIYEGTSNIQLNTIFNLTAKEQGL 446


>gi|260548810|ref|ZP_05823032.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407978|gb|EEX01449.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 593

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 51/392 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 KEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365
              I  +     +   A  YA  R               +  IL+   V +R + ++  +
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509
                +  ++D ++    E + + +F+ E+ A
Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508


>gi|171057535|ref|YP_001789884.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170774980|gb|ACB33119.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 26/253 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251
           +   LTE   G+D  A+ ++G  + DG  Y L G K ++++   + AF ++A+ +G    
Sbjct: 120 VSFALTEPDAGSDAGALKTRG--VIDGDDYLLDGTKRYITNATRAGAFTLMARTDGPGTA 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
            +  F+VP         GL   +   K+G R   T ++   N     +   N+  G P  
Sbjct: 178 GISAFIVP-----ADAAGLSLGKPDKKMGQRGTKTCDVNLDNV---RVPAANIIGGVPGR 229

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K  +  LD   + VS +   +A     E+I YA++R   G  + D  +++  +AD   
Sbjct: 230 GFKTAMKVLDRGRLHVSALACGMAQRILQESIAYAQQRRQFGQRIGDFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++ A  A+    A  +DE A  R++      + A  TK +  +M   V    ++  GG+G
Sbjct: 290 ELLAGWAMVQATARRYDERAAGRTDPDVG--MQASCTKLFTTEMVGRVADRGVQIHGGAG 347

Query: 424 YIEERSIARHYRE 436
           YI E  + R YR+
Sbjct: 348 YINEYKVERFYRD 360


>gi|154706589|ref|YP_001424445.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111]
 gi|154355875|gb|ABS77337.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111]
          Length = 387

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  + ++  D I+ L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E   P     Q+L +K+G R + T EL F +       +LG+LN     +  M  
Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L Y  L      +  M+  L   + Y   R      + +  +++  IAD+   + A+ A 
Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  K  S++AA A + A        + A  V  +A++C+GG+GYI E  + R
Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 356 FLRDAKLYEIGAGT 369


>gi|300784791|ref|YP_003765082.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299794305|gb|ADJ44680.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 15/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LV 258
           L +TE  GG+D+A I +   +  D  Y ++G K F++S     F+      G  G   L 
Sbjct: 125 LAVTEPDGGSDVAGIRTTAVREGDE-YVINGAKTFITSGCRADFVTTVVRTGGDGAHGLS 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             ++E G+P G    R   K+G   + T EL + +       L+G  N     V    + 
Sbjct: 184 LIVVERGTP-GFTVSRKLEKMGWLCSDTAELSYVDVRVPVEHLVGAENSGFAQVATQFVT 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + +  + +L   + + R R   G  LI + V++  + ++A  I  A   + +
Sbjct: 243 ERLSLAVQAYAHAQRALDLTLDWCRLRETFGRPLISRQVVQHKLTEMARKIDVARTYTRQ 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A      +    EA +A+  A     W       V++EA++  GG GY+ E  + RHYR
Sbjct: 303 AAIRHVSGEEVIAEACFAKNTAVEAAEW-------VVSEAVQLHGGLGYMRESEVERHYR 355

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 356 D--VRILGIGGGTTEILTGL 373


>gi|262371617|ref|ZP_06064896.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311642|gb|EEY92727.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 390

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L+A +E     S  V  + M+  + TP +H    P+I   E  P   A  + +++AI   
Sbjct: 77  LLAAIEMAKAASGGVHISLMIHSIGTPPIHHFARPEI-RDEVMPQIIAGEKISALAI--- 132

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259
            TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +    G   + 
Sbjct: 133 -TEPSGGSDVAALKTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPNGQGPKGIS 190

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   + 
Sbjct: 191 MLLMDAHSEGITKSPLK-KMGWWASDTAHLHFDEVRVPVSHLLGQENAGFKVIMNNFNME 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL---- 372
                 ++     V   EA+ +A++R   G  LID  V++  + D+A  + A  AL    
Sbjct: 250 RFWLGAIAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTATRALLEDT 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R+     +      + +  + +A  T  +C          A++ +GG G++      R
Sbjct: 310 AYRMGKKELQGSELIAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGMKSER 362

Query: 433 HYRESPANSILLGSGNAM 450
            YRE   N I  G+   M
Sbjct: 363 IYREVKVNMIGGGAEEIM 380


>gi|270008823|gb|EFA05271.1| hypothetical protein TcasGA2_TC015428 [Tribolium castaneum]
          Length = 439

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +   S+A ++LA  +       +
Sbjct: 179 FALSEPGNGSDAGAASTTARLDGDQ-WMLNGTKAWITNGFESEAAVVLATTDKSLKHKGI 237

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +VP+        GL   + ++K+G R ++T  L F +     +   N+   P +  K
Sbjct: 238 SAIIVPK-----PTKGLELGKKEDKLGIRGSSTCSLIFEDC---QVPKANLLGEPGQGFK 289

Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I ++ LD+  + ++   + +A+A       YA +R   G  L+    ++  +A++AL + 
Sbjct: 290 IAMMTLDAGRIGIASQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLD 349

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L++R A   D  K+ ++EAA A++ A        + A  +  + ++ +GG GY+ +
Sbjct: 350 AARLLTWRAAWLKDNHKNFTKEAAMAKLAA-------SEAATYLSHQCIQILGGMGYVSD 402

Query: 428 RSIARHYRESPANSILLGS 446
               RHYR++    I  G+
Sbjct: 403 MPAERHYRDARITEIYEGT 421


>gi|326436268|gb|EGD81838.1| long-chain specific acyl-CoA dehydrogenase [Salpingoeca sp. ATCC
           50818]
          Length = 436

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGRVGCF 256
           + +TE   G+D+  +++   K  D  + L+G K F+S+  +SDA +++A+  +E +    
Sbjct: 180 IAMTEPGAGSDLQGVSTTAIKDGDE-WVLNGSKVFISNGQLSDAVVVVAKTDLEAKRAAH 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
            +   + D    G    +  +K+G ++  T EL F +       LLG LN          
Sbjct: 239 GLSLFIVDAGTPGFSKGKNLHKMGLKAQDTSELFFEDCRVPESALLGQLNKGF-----YH 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  L    + +  M V+ AEA +     Y   R    G L +   ++  +A++  DIA 
Sbjct: 294 LMTELPQERLLLGVMAVAHAEACYEWTREYINERKAFSGTLANLQTVRHKMAELKTDIAV 353

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A + +      E +  +E       MA + KYWC  +   V    ++  GG GY+ E 
Sbjct: 354 CRAFADQCILLHSEGRLNTE-------MASMVKYWCTDLESRVADACVQLHGGYGYMWEY 406

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + R Y ++    I  G+   M
Sbjct: 407 PVCRAYVDARVQRIYGGANEIM 428


>gi|260425978|ref|ZP_05779957.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260420470|gb|EEX13721.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 375

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 30/261 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254
           G  LTE   G+D +AI ++  +  D  Y L+G K F++S  + D  I  A  +   G   
Sbjct: 120 GFALTEPHTGSDASAIRTKAVRDGDH-YVLNGSKQFITSGKNGDVIITFAVTDPTAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305
              F+VP         G     ++ K+G  S+ T  L F+       N  G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMAVERKLGQHSSDTCALAFNEMRLPAENLLGAEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR RH  G  +++Q  +   +AD+A  
Sbjct: 234 LSNLEGGRIGI----ASQAVGMARAAFEAARDYARDRHAFGKPILEQQAVAFKLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  +    A   +  +    EA+ A++MA        +MA  V + A++  GG GY+
Sbjct: 290 IEAARQMVLHAAALREAGRPCLTEASMAKLMA-------SEMAEEVCSGAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R YR+     I  G+
Sbjct: 343 ADYPVERIYRDVRVCQIYEGT 363


>gi|150002926|ref|YP_001297670.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482]
 gi|254884707|ref|ZP_05257417.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294775842|ref|ZP_06741342.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|319642377|ref|ZP_07997031.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A]
 gi|149931350|gb|ABR38048.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482]
 gi|254837500|gb|EET17809.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294450302|gb|EFG18802.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|317385992|gb|EFV66917.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A]
          Length = 568

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P++K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|116250739|ref|YP_766577.1| Acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255387|emb|CAK06462.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 592

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 182/446 (40%), Gaps = 73/446 (16%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L   G   G    D +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILAEAGRFATEEVAPLAEIGDRQGARLIDGEVRLPDGWRDLYRHWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWA 175
                +F          + A  ++    +  G  ++P++T  ++  V    +  +   + 
Sbjct: 91  LTAPEAFGGQALPHMLNVAALEMWNSGSMAFG--LAPTLTMGAIEAVGAHGSAALKDKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+  + ++ ++  DG Y L G K F+
Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     +++A ++V    V+
Sbjct: 256 GIHGSPTCTMIYGDGKFGGEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310

Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377
           +AEA     + YAR R         S G+  +++ P + R +  +      A A+S+  A
Sbjct: 311 IAEAATQKALAYARERTQGRAPGSSSAGMSPIVEHPDVARMLLTMKALTQGARAISYACA 370

Query: 378 NSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           ++ D +       +   E AA   ++ PI K +       V +  ++  GG G+IEE   
Sbjct: 371 HAIDMSHRAGDISRQWQERAA---LLTPIAKSFSTDSGVDVASLGIQVHGGMGFIEETGA 427

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456
           AR+ R++    I  G+     +D++ 
Sbjct: 428 ARYLRDARIAPIYEGTNGIQAIDLVT 453


>gi|120599501|ref|YP_964075.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|146292501|ref|YP_001182925.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|120559594|gb|ABM25521.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
 gi|145564191|gb|ABP75126.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
 gi|319425805|gb|ADV53879.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 385

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++  Q + + DG  Y +SG K F+S   +   +++    G+ G   +  
Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           +       G+ Y + ++K+G  +  T ++ F N       LLG+     G    MK L  
Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  R
Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R
Sbjct: 299 LA-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|297171976|gb|ADI22961.1| acyl-CoA dehydrogenases [uncultured nuHF2 cluster bacterium
           HF0500_39O04]
          Length = 423

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 19/264 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        ++E  GG+D+AA+ +   K+    YCL+G K W  ++ +++ +++ A+
Sbjct: 155 PVAEGKKIAAFAISEPEGGSDVAAMRTTA-KLDGNEYCLNGKKAWISNAGIANYYVLFAR 213

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLN 303
            +   G   +   + D    G+      N I      T+ L+       N  G       
Sbjct: 214 TDDAPGAKGLSAFIVDSDTPGITVSERINVIAPHPLGTLSLKNCRIPTVNILGSSGDGFK 273

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V+   ++  +  +       S+   R ++ EAI  +++R   G  + +  +++  IAD+A
Sbjct: 274 VAMATLDVFRTTV----GAASLGFARRAMDEAIARSKQREAFGKPISEFQLIQEKIADMA 329

Query: 364 LDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           L I A   L +R A   DE  +R + E++ A++       +  + A  VI +A++  GG 
Sbjct: 330 LKIDAMALLIYRSAWVKDEKGTRVTRESSMAKL-------YGTEAAQEVIDQAVQIFGGM 382

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G +   ++ R YRE  A  I  G+
Sbjct: 383 GVVSGVTVERLYREIRALRIYEGT 406


>gi|320011992|gb|ADW06842.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 390

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--C 255
           L+E   G+D A++ ++   + DG  + L+G K W     ++D + +LA+   +G  G   
Sbjct: 133 LSEPSSGSDAASLRTK--AVRDGEDWVLTGTKAWITHGGVADFYTVLARTGEDGPRGITA 190

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP     G   GL     + K+G + + T +L F      + GD  +          L
Sbjct: 191 FLVP-----GDAQGLDAALPEKKMGMKGSPTAQLHFDGVR--ISGDRRIGEEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDSGRLGIAACAVGVAQAALDEAVRYATDRRQFGRPVADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D   + S +AA A       K +C   A  V  +A++ +GG GY  +  +
Sbjct: 304 ALYLEAARLRDAGLAFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    I+ G+
Sbjct: 357 ERLMREAKVLQIVEGT 372


>gi|165918615|ref|ZP_02218701.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334]
 gi|165917743|gb|EDR36347.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334]
          Length = 387

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  + ++  D I+ L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E   P     Q+L +K+G R + T EL F +       +LG+LN     +  M  
Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L Y  L      +  M+  L   + Y   R      + +  +++  IAD+   + A+ A 
Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  K  S++AA A + A        + A  V  +A++C+GG+GYI E  + R
Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 356 FLRDAKLYEIGAGT 369


>gi|78043883|ref|YP_360552.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995998|gb|ABB14897.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 380

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D++AI +  +   D  + L+G K F+++  ++  + + A V+   G   +  
Sbjct: 125 LTEPEAGSDVSAIKTTARLEGDE-WVLNGTKCFITNGGVASLYTVFATVDRSKGIKGITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
            L  G   G+   + + K+G+R++   E+   N         G +     ++   ++  +
Sbjct: 184 FLVPGDTPGIYGGKKEKKMGDRASHVAEVILENVRIPRENVLGEVGSGFKIAMQTLDQTR 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +I       +V   R +L EA+ YA+ R   G  + +   ++  +AD+A+ I AA AL 
Sbjct: 244 PMI----GATAVGVARRALDEALKYAKERKQFGRPIAEFQAIQFMLADMAMQIEAARALV 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++     D+    ++E A A+  A         +A  V  +A++ +GG GY+ +  + + 
Sbjct: 300 WKACWMLDQGMKATKEGAMAKCFA-------SDVAMRVTVDAVQILGGYGYMRDYPVEKL 352

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 353 MRDAKITQIYEGT 365


>gi|332307811|ref|YP_004435662.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175140|gb|AEE24394.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 385

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 127/311 (40%), Gaps = 51/311 (16%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+A    P +   W P + + +             +     LTE   G+D AA+ +   K
Sbjct: 96  MIAKWGKPELKDKWCPDLVTGK-------------LLASYCLTEPGSGSDAAALRTSA-K 141

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRL 275
           +    Y L+G K F+S +  +D  +++A+  G     +  FLVP         G+ Y + 
Sbjct: 142 LDGDEYVLNGSKMFISGAGETDVLVVMARTGGEGPKGISAFLVP-----ADAKGVVYGKA 196

Query: 276 KNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           + K+G  +  T  + F N              GF      +  G V         + A  
Sbjct: 197 EEKMGWNAQPTRLITFDNVRISQINLLGEEGQGFSFAMQGLDGGRV---------NIATC 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +L  A  Y + R   G  L     ++  +AD+A ++ AA  +  RLA +F   
Sbjct: 248 SIGTAQQALNTATAYMQERTQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLD 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              SE +AY      + K +   +   V  +A++  GG GYI+E  + RH R+   + IL
Sbjct: 306 NKDSERSAYC----AMAKRFATDVGFEVCNQALQIHGGYGYIQEYPLERHVRDVRVHQIL 361

Query: 444 LGSGNAMVLDV 454
            G+   M + V
Sbjct: 362 EGTNEIMRMIV 372


>gi|293607052|ref|ZP_06689395.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814542|gb|EFF73680.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 397

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
            GLTE   G+D   + ++  K SDG Y +SG+K W  +SP++D F++ A+      +G++
Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTSDG-YKISGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
             F++     D    GL    +  K+G R++ T E+   E   +   ++  ++   GP  
Sbjct: 196 RGFIL-----DKGMKGLSAPAIHGKVGLRASITGEIVMDEVEVSEDQMMPGVSGLKGP-- 248

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   ++   V  AEA  H AR+    R   G  L    ++++ +AD+  +
Sbjct: 249 ----FTCLNSARYGIAWGAVGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTE 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A     RL    DE  +  E       +  I K   C  A  +   A + +GG+G  
Sbjct: 305 ITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357

Query: 426 EERSIARH 433
           +E  +ARH
Sbjct: 358 DEFGVARH 365


>gi|265754313|ref|ZP_06089502.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA]
 gi|263235022|gb|EEZ20577.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA]
          Length = 568

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P++K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|295400654|ref|ZP_06810631.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112656|ref|YP_003990972.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294977235|gb|EFG52836.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217757|gb|ADP76361.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 379

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           GL+E   G+D+A++ ++  +  D  Y L+G K W  +   ++ +++ A  +       + 
Sbjct: 124 GLSEPGAGSDVASMKTRAVRDGD-YYVLNGSKVWITNGGEAEIYVVFAITDPEKRHKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G    + + K+G RS+ T EL F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A+     AI YA++R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A          + +A A++ A  T       A  V  +A++  GG+GY ++ 
Sbjct: 295 ARLLTYQAAWLETNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     L +  +L +
Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|29654289|ref|NP_819981.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493]
 gi|161830802|ref|YP_001596739.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331]
 gi|29541556|gb|AAO90495.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493]
 gi|161762669|gb|ABX78311.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331]
          Length = 387

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  + ++  D I+ L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E   P     Q+L +K+G R + T EL F +       +LG+LN     +  M  
Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L Y  L      +  M+  L   + Y   R      + +  +++  IAD+   + A+ A 
Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  K  S++AA A + A        + A  V  +A++C+GG+GYI E  + R
Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 356 FLRDAKLYEIGAGT 369


>gi|212690639|ref|ZP_03298767.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855]
 gi|237709681|ref|ZP_04540162.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|237725166|ref|ZP_04555647.1| acyl-CoA dehydrogenase [Bacteroides sp. D4]
 gi|212666739|gb|EEB27311.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855]
 gi|229436432|gb|EEO46509.1| acyl-CoA dehydrogenase [Bacteroides dorei 5_1_36/D4]
 gi|229456317|gb|EEO62038.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA]
          Length = 568

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +ID P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P++K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|160942851|ref|ZP_02090091.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445903|gb|EDP22906.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii
           M21/2]
          Length = 637

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +      D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A++       +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   ++  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365


>gi|120613007|ref|YP_972685.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
 gi|120591471|gb|ABM34911.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
          Length = 395

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G+K W  + P +D  ++ A+ E  +G   V
Sbjct: 131 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPELGARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F N       +LG +N         K+L
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVNGGA------KVL 243

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 244 MSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  E     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 304 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRLWRDAKLYEIGAGT 378


>gi|78045829|ref|YP_362004.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78034259|emb|CAJ21904.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 387

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI E   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|225175023|ref|ZP_03729020.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169663|gb|EEG78460.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 377

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  + + DG Y L+G K F+++  ++D F++ A V+   G      
Sbjct: 123 LTEPNAGSDAASVATNAKAV-DGGYVLNGSKCFITNGDVADLFVVFATVDKSKGLKGLTA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           F+VP+       +G+   + + K+G R+++TV + F        N  G       V+   
Sbjct: 182 FVVPK------SDGVSAGKKEIKLGIRASSTVVVNFDNVFVPAENVLGGEGMGFKVAMQT 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  + LI      +SV   R +   A+ YA+ R   G  + +  +++  +A++A  I A
Sbjct: 236 LDTSRPLI----GALSVGVARGAYESAVKYAKERVQFGQPIANFQMIQAMLANMATRIDA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L +R A+  D+     ++A++A+  A + K +   +A  V  +A++ +GG GY  E 
Sbjct: 292 SRLLVWRAADMVDQ-----KDASFAKESA-MAKMYASDVAMDVTTDAVQILGGYGYSREY 345

Query: 429 SIARHYRESPANSILLGS 446
            + ++ R++    I  G+
Sbjct: 346 PVEKYMRDAKIMQIYEGT 363


>gi|297198581|ref|ZP_06915978.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197715453|gb|EDY59487.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 384

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 49/304 (16%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA   T    + W P + S EY              +G  GLTE   G+D   + ++
Sbjct: 96  AKTVAAWGTEEQKRHWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLATR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y + G K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 142 AVRDGDD-YVIDGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVPT-----DTPGLT 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI----MSVSG 327
            + +  K+G R  AT EL            +  S    E+ K      SA+    MSV+ 
Sbjct: 196 RRTIHGKLGLRGQATAELVLEGV------RVPASAMVGEEGKGFSVAMSALAKGRMSVAA 249

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D 
Sbjct: 250 GCVGIAQAALDAALRYAGEREQFGKPIAGHQLVQELISDIAVDVDAARLLTWRVADLIDR 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + E++ A++ A        + A      A++  GG GYI+E    +  R++   ++
Sbjct: 310 GEPFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTL 362

Query: 443 LLGS 446
             G+
Sbjct: 363 YEGT 366


>gi|220928421|ref|YP_002505330.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
 gi|219998749|gb|ACL75350.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
          Length = 378

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 25/265 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQV 249
           M K  +    GLTE   G+D  +I +      D  Y L+G  KW     ++D F++ A+ 
Sbjct: 113 MSKGHIIGAFGLTEPNVGSDAKSIETTAVLNGD-CYVLNGKKKWITMGQVADVFLIFARC 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           E +   FLV R       +G   + +K  +G R++   EL   +       ++G +    
Sbjct: 172 EDKPTAFLVNR-----DTSGFSTKPIKGLMGARASMVAELIMEDCHIPKENIVGRVGTGL 226

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             V     L  LD    +++   V L EA     + Y+R+R   G  L    ++++ + +
Sbjct: 227 SHVG----LNSLDYGRYTIAWGCVGLGEACLEESVRYSRKRKQFGQPLRQNQLIQKMVTE 282

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++++I AA  L        D     +    +        KY+  KM   V ++A++  G 
Sbjct: 283 MSVNIKAARLLCLNAGYLKDIGDPDTIMETWN------AKYFAAKMVVKVASDAVQIHGA 336

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G   E  + R+YR+S  N I+ G+
Sbjct: 337 KGCCNEYPVERYYRDSKINEIIEGT 361


>gi|260461926|ref|ZP_05810171.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032173|gb|EEW33439.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 389

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 37/292 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
           K W PK+ + E               IG + +TE   G+D+  + ++ QK  DG  Y ++
Sbjct: 118 KKWLPKLATGEL--------------IGAIAMTEPGAGSDLQGVKTRAQK--DGNQYKVN 161

Query: 230 GHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           G K F+++     FI++       +G  G  L+  ++E     G    R  +KIG ++N 
Sbjct: 162 GSKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFERGRNLDKIGLKAND 219

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
           T EL F++       LLG      G ++ M+ L    L     +++ +  +LA  I Y +
Sbjct: 220 TSELFFNDVRVPTSNLLGH-EEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIDYVK 278

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +ID    +  +A++  +              +++  +R        + A + 
Sbjct: 279 ERKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVARHINGGLDPVTASMA 331

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           KYW   +   V+ E ++  GG GY+ E  IAR +R++    I  G+   M L
Sbjct: 332 KYWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 383


>gi|256824680|ref|YP_003148640.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256688073|gb|ACV05875.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 394

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 28/273 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG---- 254
           G GLTE   G+D A+ T     + +G + ++G K F+++  +D       V  R G    
Sbjct: 125 GFGLTEPDAGSD-ASGTRTKASLENGEWVVNGAKSFITNSGTD-ITSCVTVTARTGTREN 182

Query: 255 ------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                   +VP     G+P G   +    K+G   + T  L F N     + + N+  G 
Sbjct: 183 GKPEISAIIVP----SGTP-GFTVEPAYRKLGWHISDTHGLTFENC---RVPESNLLGGV 234

Query: 309 VEDMK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  K  L  LD   +++S + V LA+A       YA+ R   G  +     +   IAD+
Sbjct: 235 GEGYKQFLKTLDDGRIAISALAVGLAQACLEQTTQYAKTRTAFGKPIGAYQGVSFQIADL 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + AA  L+++ A   DE ++        +  A I K +  + A      A +  GG+
Sbjct: 295 QVMVEAARVLTYKAAWLKDEQEAGRRSMQEVKKAASIAKLYSTEAAVTATRIATQVFGGN 354

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           G++EE  +AR YR+  A  + +G G + V  +L
Sbjct: 355 GFMEEYPVARFYRD--AKILEIGEGTSEVQRML 385


>gi|28872134|ref|NP_794753.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855388|gb|AAO58448.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 600

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG       A+ YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTALKQLL 469


>gi|326436776|gb|EGD82346.1| short-chain acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 401

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +   +DA ++ A  +       +
Sbjct: 141 FALSEPGNGSDAGAASTTARDEGDH-WVLNGTKSWITNGYEADAAVVFATTDKSLKHKGI 199

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP+  E     GL   + ++K+G R+++T  L F       +   N+     +  K
Sbjct: 200 SAFLVPKPTE-----GLTLGKKEDKLGIRASSTCNLIFEEC---RIPKENLLGSSGQGFK 251

Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + + +A     I YA++R   G  L    ++   +AD+   + 
Sbjct: 252 IAMATLDGGRIGIAAQALGIGQAAFECAIEYAQQRKSMGRPLSSHQMIAEKLADMGTRLE 311

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L+ + A   DE +  ++EAA A++ A        + A  +  +A++ +GG G++ +
Sbjct: 312 SARLLTHKAAVYKDEGRDFTKEAAMAKLAAS-------EAATFIAHQAIQILGGMGFVTD 364

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               RHYR++    I  G+     L +   L K
Sbjct: 365 MPAERHYRDARITEIYEGTSEIQRLVIAGKLLK 397


>gi|221124478|ref|XP_002165995.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           [Hydra magnipapillata]
          Length = 387

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + ++E   G+D+  I S   +  DG Y L+G K F+++   +D  +++A+     G  G 
Sbjct: 124 IAMSEPAAGSDLQGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGT 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311
            L+  L+E G P     QRLK K+G ++  T EL F N        L G    + G +  
Sbjct: 184 SLL--LVERGMPGFSVGQRLK-KMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICL 240

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L +  L  AI +VS  + ++   + Y + R V G  +      +  +A++   +  A
Sbjct: 241 MEQLPWERLQIAIGAVSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +      + +  +  A+ A       KYW   +   V+ E ++  GG GY+ E  
Sbjct: 301 RVFVDKCCELIGKDQLDTATASMA-------KYWTTDLQCKVMDECVQLFGGYGYMWEYP 353

Query: 430 IARHYRESPANSILLGSGNAM 450
           I R Y ++    I  G+   M
Sbjct: 354 ITRAYADARVQRIYGGTNEIM 374


>gi|218184438|gb|EEC66865.1| hypothetical protein OsI_33363 [Oryza sativa Indica Group]
          Length = 513

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 249 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 307

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F N       +LG +N         K+L
Sbjct: 308 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVNGGA------KVL 361

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 362 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 421

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  E     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 422 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 479

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 480 LGRLWRDAKLYEIGAGT 496


>gi|94313946|ref|YP_587155.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357798|gb|ABF11886.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           metallidurans CH34]
          Length = 379

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 51/309 (16%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A +      + W PK+ S E               + +G+TE   G+D+ A+ +  
Sbjct: 97  APYIARIANEEQKQRWLPKVCSGE-------------AILAIGMTEPGTGSDLKAVRTTA 143

Query: 219 QKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             I DG  Y ++G K F+S+ ++ D  IM+ + +   G   V  ++ +    G    R  
Sbjct: 144 --IRDGDEYVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSLIMVEADREGFRRGRKL 201

Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            K+G  +  T EL F N               F +L+G+L     P E + I      A+
Sbjct: 202 EKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGEL-----PQERLSI------AV 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI-ALDIAAATALSFRLANSFD 381
            + + +   L   I Y + R      + D    K  +ADI A  +A    + + L+    
Sbjct: 251 SAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYLSEHIR 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S  E        A I K +  +     + E ++  GG GY+ E  +AR + +S    
Sbjct: 311 RRLSLEE--------AAIAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADSRVTR 362

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 363 IYGGTSEVM 371


>gi|119774514|ref|YP_927254.1| butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
 gi|119767014|gb|ABL99584.1| Butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
          Length = 385

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 15/268 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++T++  +  D  Y ++G K F+S   +   +++    G  G   +  +
Sbjct: 124 LTEPGAGSDAASLTTKAVREGDE-YVINGSKMFISGAGATELLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L   
Sbjct: 183 AIPADAEGVIYGKAEDKMGWNAQPTRLITFENVRVPVQNLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  +I Y   R   G  L     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERSIAYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E  AY      + K +   +  AV   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDSQDPEATAYC----AMAKRFATDIGFAVCDAALQIHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVLDV-LNLLEKGTN 463
              + IL G+   M L +   LL++  N
Sbjct: 355 VRVHQILEGTNEIMRLIISRRLLDENAN 382


>gi|325124095|gb|ADY83618.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 375

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D  AI ++  K  D  Y L+G K F++S  +   I++  V
Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGDNAGVIIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   FLVPR        G    R++ K+G  ++ T ++  ++       +LG
Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R +L EA  YA+ R   G  + +   + 
Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A +I AA  L    A   +  +    EA+ A++ A        +M   V + A+
Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  I R YR++    I  G+ +
Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365


>gi|313115923|ref|ZP_07801350.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621687|gb|EFQ05215.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 637

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +      D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A++       +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   ++  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365


>gi|294627476|ref|ZP_06706059.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598107|gb|EFF42261.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 387

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RYVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI +   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|254819539|ref|ZP_05224540.1| FadE15 [Mycobacterium intracellulare ATCC 13950]
          Length = 609

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 54/336 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRAKAFEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      GS NG+    L++K+G +S+ T EL F  T     G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGSRNGVFVTGLEHKMGIKSSPTCELTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI---- 348
           GD++         +E  ++ I + +A    +G   +LA   E +  A    +S       
Sbjct: 284 GDVHRGIAQMFTVIEHARMTIGVKAAGTLSTGYLNALAFAKERVQGADLTQMSDKTAPRV 343

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMAPIT 400
            +I  P ++R++           AL    A   D+A ++    A          ++ PI 
Sbjct: 344 TIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDAVAQRVSGADHDMAHRIDDLLLPIV 403

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    + A  V+ E+++ +GGSG++ +  + ++ R+S  +S+  G+     LD       
Sbjct: 404 KGVSSERAYEVLTESLQTLGGSGFLADYPLEQYIRDSKIDSLYEGTTAIQALDF------ 457

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                   F  + +D G + + + T +  +I  C E
Sbjct: 458 -------FFRKIVRDRGQALQFLTTQITATIDDCDE 486


>gi|331014532|gb|EGH94588.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 600

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  SG       A+ YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTALKQLL 469


>gi|300311865|ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300074650|gb|ADJ64049.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 386

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 16/255 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +   ++ DG Y L+G K F+S   S D  +++A+  G  G   V  
Sbjct: 124 LTEPGSGSDAASLKTTA-RLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGE-GARGVSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           ++  G+  G+ Y + ++K+G  S  T  + F N       LLG      G +  MK L  
Sbjct: 182 IVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLG--QEGQGFIFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L  A  Y + R   G  + D   ++  +AD+  ++ AA  +   
Sbjct: 240 GRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRL 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D     S EA     MA   K     +   V  EA++  GG GYI E  + R++R
Sbjct: 300 AATKLDAG---SPEATTYCAMA---KRLATDLGFRVCNEALQLHGGYGYIREYPLERYFR 353

Query: 436 ESPANSILLGSGNAM 450
           +   + IL G+   M
Sbjct: 354 DVRVHQILEGTNEIM 368


>gi|294010955|ref|YP_003544415.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292674285|dbj|BAI95803.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 600

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 137/338 (40%), Gaps = 47/338 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE   GTD+  I ++     DG + ++G K F+S+   D       ++LA+     E
Sbjct: 163 MNLTEPHCGTDLGLIKTRAVPGPDGSFTITGTKIFISAGEHDLTENIIHLVLAKTPDAPE 222

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F+VP+ L  EDGS    N +    L++K+G   N+T  + +    G+L+G+ N
Sbjct: 223 GSRGISLFVVPKFLVNEDGSLGKRNAVSCGSLEHKMGIHGNSTCVMNYDGATGWLVGEEN 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA----- 358
                +  M     L   +  ++   V+   A  YA  R     +   Q   ++A     
Sbjct: 283 KGLAAMFIMMNAARLGVGLQGLAQAEVAYQNAAAYAHERRQGRALTGPQDPQEKADTLFA 342

Query: 359 ---IADIALDIAAAT----------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              +  + ++  A T          AL   LA+     + R       +++ P+ K +  
Sbjct: 343 HPDVRRMLMEARALTEGLRALMLWGALQVDLAHQAATEEERQAADDLLQLLTPVIKGYGS 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                V   A +  GG GYI E  + ++ R++    I  G+     +D++          
Sbjct: 403 DKGFDVTVMAQQVFGGHGYIWENGVEQYVRDARIAQIYEGTNGVQGMDLVG--------- 453

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                 L  + G + +  + I+ + ++  K D+ LA F
Sbjct: 454 ----RKLPMNGGRALQAFLKIVGEEVAQAKGDEKLAGF 487


>gi|302383508|ref|YP_003819331.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194136|gb|ADL01708.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 389

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++ +Q +K+ D  Y
Sbjct: 112 TPDQKTRYLPKLISGEHVGS-------------LAMSEAGSGSDVISMRTQARKVGD-RY 157

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K W  ++P +D  ++ A+ +   G   V   L +    G    +  +K+G R + 
Sbjct: 158 VLNGTKFWITNAPSADTLVVYAKSDPEAGSKGVTAFLIEKGMKGFSVSKKLDKMGMRGSD 217

Query: 286 TVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           T EL F        N  G + G   V    ++  + ++    A   +  M+ +L   + Y
Sbjct: 218 TAELVFEDCEVPEENVMGPVGGGAGVLMSGLDYERAVL----AAGPLGIMQAALDVVLPY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +    +M+  IAD+ + + +A    + +A + D   +   +AA A ++A 
Sbjct: 274 VRDRKQFGKPIGSFQLMQGKIADMYVALNSARTYVYAVAKACDAGLTTRYDAAGAILLA- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  + A  V  EA++ +GG+GY ++  + R  R++    I  G+
Sbjct: 333 ------SENAVKVSLEAVQALGGAGYTKDWPVERLVRDAKLYDIGAGT 374


>gi|126653094|ref|ZP_01725223.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905]
 gi|126590099|gb|EAZ84224.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905]
          Length = 594

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 156/364 (42%), Gaps = 59/364 (16%)

Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           S+T  + V + + P V        K + PK+ S E             +     LTE   
Sbjct: 109 SITHGAHVGIGSLPIVLFGDEDQKKKYLPKLASGE-------------LIAAYALTEPGS 155

Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264
           G+D + A T+     +   Y L+G K W  ++  +D F++ A+++G +   F+V R  + 
Sbjct: 156 GSDALGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFTAFIVERAFK- 214

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319
               G+     + K+G +S++T  L   +       LLG+  +  G V    IL      
Sbjct: 215 ----GVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHVIAFNILNIGRYK 268

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + ++ G + +   A+ Y  +R      L D  + K  ++ +A  + A+ +L++R    
Sbjct: 269 LGVGTIGGSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGL 328

Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           F++  S+   EE    +++A           I K +  +    +  EA++  GG G++ E
Sbjct: 329 FEDRLSQLSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388

Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475
             + R YR+S  N I  G+   N M++            L LL+   NL ++L   + +D
Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPED 448

Query: 476 LGSS 479
           +G+ 
Sbjct: 449 IGTE 452


>gi|326336526|ref|ZP_08202696.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691399|gb|EGD33368.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 378

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 51/300 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + W PK+ S E+              IG  G+TE   G+D   + +   K  D ++ L+G
Sbjct: 109 RRWLPKLASGEH--------------IGAWGITEHNTGSDAGGMHTTAIKKGD-MWVLNG 153

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K F++  +S   +++    G  G       F+V R        G    +  +K+G R++
Sbjct: 154 TKNFITHAISANVVVVIARTGEKGDKHGMTAFVVER-----GTKGFSNGKKISKLGMRAS 208

Query: 285 ATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            T EL F +    L+ D N    +  G ++ MK+L   D   +S+  + +  A+     A
Sbjct: 209 ETAELIFQDC---LIPDENRLGEIGEGFIQAMKVL---DGGRISIGALSLGTAKGAVNAA 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA+ R   G  +I    +   +A+++ +I AA  +  + A+  +  +  +++AA A++
Sbjct: 263 IKYAKERTQFGKPIISFQAIGFKLAELSTEIEAAELMLHKAAHLKETHQKVTQQAAMAKL 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A      C K +     EA++  GG GY  +  + + YR++   +I  G G + +L ++
Sbjct: 323 YAS---ELCVKASN----EAIQIHGGYGYTTDYPVEKFYRDAKLCTI--GEGTSEILKLV 373


>gi|196249788|ref|ZP_03148484.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196210664|gb|EDY05427.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 380

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           GL+E   G+D+A++ ++  K  D  Y L+G K W  +   ++ +++ A  +       + 
Sbjct: 124 GLSEPGAGSDVASMKTRAIKDGDH-YVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G    + + K+G RS+ T EL F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A+     A+ YA++R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A          + +A A++ A  T       A  V  +A++  GG+GY ++ 
Sbjct: 295 ARLLTYQAAWLESNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     L +  +L +
Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|169795529|ref|YP_001713322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii AYE]
 gi|184158668|ref|YP_001847007.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213158530|ref|YP_002319828.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483016|ref|YP_002325221.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|301344986|ref|ZP_07225727.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513238|ref|ZP_07238475.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596353|ref|ZP_07241361.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332874363|ref|ZP_08442274.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|169148456|emb|CAM86322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii AYE]
 gi|183210262|gb|ACC57660.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057690|gb|ACJ42592.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986266|gb|ACJ56565.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|322507521|gb|ADX02975.1| Putative acyl-CoA dehydrogenase protein [Acinetobacter baumannii
           1656-2]
 gi|323518583|gb|ADX92964.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737442|gb|EGJ68358.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 378

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|149375432|ref|ZP_01893202.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893]
 gi|149360137|gb|EDM48591.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893]
          Length = 388

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 128/324 (39%), Gaps = 60/324 (18%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217
           MVA      + K  APK+ S E+                LG   LTE   G+D   + ++
Sbjct: 96  MVAQFGNADIQKQIAPKMASGEW----------------LGSYCLTEPGAGSDAGNLRTK 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-------CFLVPRLLEDGSPNGL 270
             +  D  Y L+G K F+S   +   +++    G  G        F+VP        +G+
Sbjct: 140 ATRDGDS-YVLNGSKVFISGAGATQMLVVMARTGEPGSGPKGISAFVVP-----ADSDGI 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYL 318
            Y + + K+G  S  T ++ F N              GF++    +  G          L
Sbjct: 194 HYGKAEEKMGWNSQPTRQITFENVRVPANNRLGEEGQGFMIAMKGLDGG---------RL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  S+ G + +L  A +Y   R   G  L     ++  +AD+A ++ AA  +    A 
Sbjct: 245 NIATCSLGGAQAALLRARNYMHEREQFGQSLAGFQALQFKLADMATNLVAARQMVRLAAY 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+  +       A +   + K +       V  EA++  GG GYI E  + R+ R+  
Sbjct: 305 RLDQGDTE------ATLHCAMAKRFATDACFEVCNEALQLHGGYGYIREYPLERYVRDLR 358

Query: 439 ANSILLGSGNAMVLDVL-NLLEKG 461
            + IL G+   M L V   LLE G
Sbjct: 359 VHQILEGTNEIMRLIVARRLLEPG 382


>gi|294941816|ref|XP_002783254.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239895669|gb|EER15050.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 436

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 24/266 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255
           + L +TE   G+D+A I +      DG  Y ++G K F++S P +D F     + G  G 
Sbjct: 174 LALAVTEPYAGSDVANIQTTAVLQPDGKHYLVNGMKTFITSGPWADYFTTAVHIAGDSGL 233

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L   L+ D +  G+   RL  + G +S+ T  + F +       L+G        +   
Sbjct: 234 SL---LMIDRTLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGFKAIMHN 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ S    R+ + +AI YA+ R   G  LID  V++  IA++A  + A    
Sbjct: 290 FNHERLMLALQSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRVLATHYY 349

Query: 373 SFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +A  + ++ S+SE   + A  ++ A  T  +C +       EA + +GG  Y++   
Sbjct: 350 IENIAIQWPQS-SQSELAGKVALLKVQATKTFEFCAR-------EASQVLGGRSYLQGSG 401

Query: 430 ----IARHYRESPANSILLGSGNAMV 451
               I R YRE   N+I  GS   M+
Sbjct: 402 PGARIERLYREVRVNAIGGGSEEIML 427


>gi|119504203|ref|ZP_01626284.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460206|gb|EAW41300.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 389

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 39/291 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TPR  + + PK+ S E+              IG L ++E   G+D+ ++  +  K  D  
Sbjct: 110 TPRQREQYLPKLCSGEH--------------IGALAMSEPSAGSDVVSMRLRADKKGDH- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +D +++ A+ E   G   +   ++E  SP     Q+L +K+G R 
Sbjct: 155 YILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDSPGFSRAQKL-DKLGMRG 213

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +       +LG+LN          ++  LD     +SG  V L +A     
Sbjct: 214 SNTCELVFEDCEVPAENILGELNKGVA-----VLMSGLDYERAVLSGGPVGLMQACLDVC 268

Query: 341 RRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +V      DQP+     ++  +AD+    AA+ +  + +  + D  +   ++AA A I
Sbjct: 269 VPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGEDSRKDAA-AVI 327

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +      +  +MA     +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 328 L------YTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGT 372


>gi|221069272|ref|ZP_03545377.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714295|gb|EED69663.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 395

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPEMGARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F N       +LG LN+        K+L
Sbjct: 190 TAFLIEKGMQGFSIAQKLDKLGMRGSHTGELVFQNVEVPAENILGGLNMGA------KVL 243

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLVQGKVADMYTVLQAG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  E     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 304 RSFAYTVAKNLDLLGT--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRLWRDAKLYEIGAGT 378


>gi|126436590|ref|YP_001072281.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236390|gb|ABN99790.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 379

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFL 257
           L+E + G+D AA+  +   ++DG Y ++G K W     ++D + + A+     G + CFL
Sbjct: 127 LSEPQAGSDAAALACKATAVADG-YRINGAKAWITHGGIADFYSLFARTGEGSGGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V +       +GL + + + K+G  +  T    + +    +     + T           
Sbjct: 186 VEK-----DTDGLSFGKPEEKMGLHAVPTTTAHYDDAL--VPTQRRIGTEGQGLQIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++ + V LA     EA+ YA++R   G  +ID   +   +AD+A  + +A   
Sbjct: 239 LDAGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAFLLADMAAAVDSAR-- 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D A+ R     Y+R  A + K      A  V  +A++  GG GY  +  + R
Sbjct: 297 ----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTRDYRVER 351

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 352 YMREAKITQIFEGT 365


>gi|325925878|ref|ZP_08187247.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325543709|gb|EGD15123.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 387

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI E   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|317406282|gb|EFV86525.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 384

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 38/328 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PS T+   +  M T  V K W        + P   +  +  S      LTE   G+D 
Sbjct: 79  VDPSTTAFLTIHNMATWMVGK-WGQPALRETWGPLLASGQKLASYC----LTEPGAGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266
           A+++++ Q+  D  Y L+G K F+S    +D  +++A+  G     +  F VP       
Sbjct: 134 ASLSTRAQRQGD-HYVLNGAKAFISGGGDTDLLVVMARSGGEGAGGISAFAVP-----AD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
             G+ Y R + K+G  S +T  + F N     G LLG+        E  KI +  LD   
Sbjct: 188 SEGISYGRKEEKMGWNSQSTRPIVFENVRVPAGNLLGEEG------EGFKIAMKGLDGGR 241

Query: 323 MSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +++    V  A+    A RR++         L +   ++  +AD+A  + AA  +    A
Sbjct: 242 INIGTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVAARQMVRLAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D        A  A     + K +   M   +  +A +  GG GY+ +  + R  R++
Sbjct: 302 CKLDAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDT 355

Query: 438 PANSILLGSGNAM-VLDVLNLLEKGTNL 464
             + IL G+   M V+    LLEKG ++
Sbjct: 356 RVHQILEGTNEIMRVIIARQLLEKGADI 383


>gi|311106651|ref|YP_003979504.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761340|gb|ADP16789.1| acyl-CoA dehydrogenase 2 [Achromobacter xylosoxidans A8]
          Length = 375

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 30/263 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +++ ++ ++  D  Y L+G K F++S  S   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASSLHTRARRDGDD-YILNGAKQFITSGRSGQVVIVFAVTDPEAGKRG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVS 305
              F+VP         G    R+++K+G  ++ T ++ F +      + LG       ++
Sbjct: 179 ISAFIVPT-----DTPGYKVLRVEDKLGQHASDTCQIAFEDMRIPAAYRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  SV   R +   A  YAR R   G  +++   +   +AD+A  
Sbjct: 234 LSNLEGGRIGI----ASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVAFRLADMATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  +    A   +  +    EA+ A++ A        +MA  V + A++ +GG GY+
Sbjct: 290 IHAARQMVLHAAALREAGRPALTEASMAKLFA-------SEMAEKVCSAAIQTLGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGN 448
           ++  + R YR+     I  G+ +
Sbjct: 343 KDFPVERIYRDVRVCQIYEGTSD 365


>gi|241662385|ref|YP_002980745.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864412|gb|ACS62073.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 397

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPKLVTGEWIGCFGLTEPNHGSDPASMITRAKKV-DGGYSLSGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++  ++    G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWGKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351
             + + N+  G          L+SA   ++   +  AEA  +  R++V      G  L  
Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAA 290

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 NQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365


>gi|149186181|ref|ZP_01864495.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           SD-21]
 gi|148830212|gb|EDL48649.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           SD-21]
          Length = 387

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 53/305 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K + PK+ S E             +   + +TE   G+D+ +IT+   K  +G Y
Sbjct: 111 TEEQKKKYLPKLVSGE-------------LVSAIAMTEPGVGSDLQSITTTALKDGNG-Y 156

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++G K ++S+  +  FI++       E   G  L+  LLE     G    +  +KIG  
Sbjct: 157 RINGAKTYISNGQTADFIIVVAKTDPKERAKGISLM--LLETEGAEGFQRGKKLDKIGMD 214

Query: 283 SNATVELEFSNTF-------------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           +  T EL F + F             GF  L+G+L     P E + I      A+ +++G
Sbjct: 215 AADTSELFFDDVFVPAENVLGGEEGKGFYQLMGEL-----PQERLII------AMGAMTG 263

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +  +L   + + + R   G  + D    +  +AD+     AA           ++  +R 
Sbjct: 264 IEKALETTMDFVKNRKAFGQTIWDFQNTQFVMADLKARATAARVF-------VNDCIARH 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            +   +   A + KYW  ++   V+ + ++  GG+GYI +  IAR YR+S    I  GS 
Sbjct: 317 LKRELSVDTACMAKYWVTELQGEVVDKCLQFHGGAGYINDYPIARMYRDSRITRIFGGSN 376

Query: 448 NAMVL 452
             M +
Sbjct: 377 EVMKM 381


>gi|40062853|gb|AAR37724.1| isovaleryl-CoA dehydrogenase, putative [uncultured marine bacterium
           442]
          Length = 389

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 39/291 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TPR  + + PK+ S E+              IG L ++E   G+D+ ++  +  K  D  
Sbjct: 110 TPRQREQYLPKLCSGEH--------------IGALAMSEPSAGSDVVSMRLRADKKGDH- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +D +++ A+ E   G   +   ++E  SP     Q+L +K+G R 
Sbjct: 155 YILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDSPGFSRAQKL-DKLGMRG 213

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +       +LG+LN          ++  LD     +SG  V L +A     
Sbjct: 214 SNTCELVFEDCEVPAENILGELNKGVA-----VLMSGLDYERAVLSGGPVGLMQACLDVC 268

Query: 341 RRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +V      DQP+     ++  +AD+    AA+ +  + +  + D  +   ++AA A I
Sbjct: 269 VPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGEDSRKDAA-AVI 327

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +      +  +MA     +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 328 L------YTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGT 372


>gi|319648126|ref|ZP_08002343.1| MmgC protein [Bacillus sp. BT1B_CT2]
 gi|317389761|gb|EFV70571.1| MmgC protein [Bacillus sp. BT1B_CT2]
          Length = 376

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGC 255
           LTE   G+D  ++ ++ +K  D  Y L+G K F+++   +D +++ A  +     G +  
Sbjct: 124 LTEPSAGSDAGSLKTRAEKRGD-TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V    E G+P G    + + K+G   + TV L F N              GF +   N
Sbjct: 183 FIV----EKGTP-GFFIGKNEEKMGLHGSLTVTLNFDNAVIPARQLLGEEGMGFKIALSN 237

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + TG +           A  ++     +L+EA+ + ++R+  G +  +   +   +AD+A
Sbjct: 238 LDTGRI---------GIAAQALGIAEGALSEAVQFLKKRYPDGELYKNGQALAFKLADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L ++ A+   +     + A+ A++ A  T  +       V  EA++ +G  G
Sbjct: 289 ARTEAARLLVYQAASLKQQGMQTGKAASMAKLFASETAMY-------VAGEAVQLLGDFG 341

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y ++ S  R++R++    I  G+
Sbjct: 342 YTKDFSAERYFRDAKVCEIYEGT 364


>gi|152975507|ref|YP_001375024.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152024259|gb|ABS22029.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 569

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 23/276 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +      DG  + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTEWTLNGEKQWITNAHMADVYVVFAKTNEGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E  S   L  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCEGVS---LGVEEKKMGIKGSSTATLILEDVVIPAKNVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMTIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   D+A   +++    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGIIDKAVDENDDNIMRKMSQFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + R YR++  + I  G+     L V  +L K  N
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQLN 414


>gi|23014530|ref|ZP_00054341.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 378

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE   G+D A+I ++ ++  D  Y +SG K F+S+  +    ++  V     G+ G   
Sbjct: 123 LTEPEAGSDAASIRTRARRDGDH-YVISGAKQFISTAKNGQVAIVFAVTDPNAGKRGISA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           F+VP         G    R+++K+G   + T +L F +      + LG+    L ++   
Sbjct: 182 FVVPT-----DTPGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASYRLGEEGEGLKIALAN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  ++ I    A  SV   R +L  A+ YA+ R   G  + +   +   +AD+A  +  
Sbjct: 237 LEGGRLGI----AAQSVGMARSALDHALAYAKERKQFGKPIFEHQAVAFRLADMATRLEV 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +   +A+  D  +   +EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 293 AEQMVLHVASLRDAGRPCLKEASMAKLFA-------SEMAERVCSDAIQIHGGYGYLADF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRVCQIYEGTSD 365


>gi|288556703|ref|YP_003428638.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288547863|gb|ADC51746.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 382

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-----GR 252
           + +TE   G+D+ AI +    I DG  Y L+G K F+S+ +  D F+++ + +      R
Sbjct: 124 VAMTEPGTGSDLQAIKTTA--ILDGDSYVLNGSKTFISNGLHGDLFVVVCKTDPRAEPAR 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            G  L   L+ DG+  G    +  +K+G RS  T+EL F +       LLG+       +
Sbjct: 182 AGISL---LVVDGNSEGFIKGKKLDKVGLRSQDTLELTFEDVRVPKENLLGEAGKGFYYL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL-DIAA 368
            +      L  AI +V+   V+L   + Y + R   G     +PV         L ++A 
Sbjct: 239 MEQLQQERLIVAIAAVTAAEVTLDSTLTYVKERKAFG-----KPVGSFQHNQFTLVELAT 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +     +S  E   R E+      MA   K+W   +A   ++  ++  GG GY+EE 
Sbjct: 294 KGEIGRTFLHSLVERHMRGEDVVKEVSMA---KWWLTDLAKETVSTCVQLHGGYGYMEEY 350

Query: 429 SIARHYRESPANSILLGSGNAM 450
            +AR  R+ P ++I  G+   M
Sbjct: 351 EVARRSRDIPVSAIYAGTNEIM 372


>gi|262375286|ref|ZP_06068519.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309540|gb|EEY90670.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 378

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 35/291 (12%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIG--LG---LTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           P   ++ Y    +     T +A G  LG   LTE + G+D +++  + ++  D  + L+G
Sbjct: 92  PCGITQRYGTEEQKQQYLTKLATGEWLGCFCLTEPQAGSDASSLECKAERDGDE-WVLNG 150

Query: 231 HKWFLSS----PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K F+++     ++  F +  +  G+ G  CFLVP         G    RL+ K+G   +
Sbjct: 151 TKQFITTGKHAQIALVFAVTDKSAGKKGISCFLVPT-----DAPGYIVSRLEEKMGQHCS 205

Query: 285 ATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T  +   N       LLG       ++   +E  +I I    A  SV   R +L  A+ 
Sbjct: 206 DTATIVLDNCRIPAANLLGQEGEGYKIALSNLESGRIGI----AAQSVGMARAALDAAVE 261

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  ++    +   +AD+A  I AA  L    A   D   +  +EA+ A++ A
Sbjct: 262 YANDRKAFGVEIVQHQAVAFRLADMATQIEAARQLVLHAATLKDAGLACLKEASMAKLFA 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    +A  V ++A++  GG GY+ +  + R YR+   + I  G+ +
Sbjct: 322 ST-------IAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASD 365


>gi|254502714|ref|ZP_05114865.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222438785|gb|EEE45464.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 392

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 31/297 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           VA   T    + W PK+ S EY              +G + +TE   G+D+ ++ +  + 
Sbjct: 109 VAAYGTDSQKERWLPKLASGEY--------------VGAIAMTEPGTGSDLKSVKTTAEL 154

Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNK 278
           + +  Y L+G K F+++  + D  I++A+ +  +G   V  L LE    +G    R   K
Sbjct: 155 VGNE-YVLNGSKIFITNGQTADLIIVVAKTDKTMGTKGVSLLVLETEGADGFTRGRNLKK 213

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           +G ++N T EL F +       LLG      G  + MK L +  L  A +++  +  ++ 
Sbjct: 214 LGCKANDTSELFFEDVRVPPENLLGG-EEGQGFYQLMKQLPWERLIIACLALGVIDFAID 272

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E + Y + R   G  ++D         +    +A     +  L +  ++  +R +E    
Sbjct: 273 ETVRYVQDRKAFGQRVMD-------FQNTRFKLAECKTKAEVLRSFLNDCIARMDEGTLD 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              A + KYW  ++   +  E ++  GG GY+ E  IAR Y +S    I  GS   M
Sbjct: 326 AATASMAKYWGTQVQNEIANECLQLHGGYGYMMEYPIARIYADSRVQMIYGGSNEIM 382


>gi|212639075|ref|YP_002315595.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560555|gb|ACJ33610.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 403

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+AAI++   +  D  Y L+G K W     ++D FI+ A 
Sbjct: 120 PQAKGEKIGAFGLTEPNAGSDVAAISTTAVRDGDD-YILNGQKTWISLCDIADHFIVFAY 178

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +       +  F+V R +      G   + +K K+G R+  T EL F N     +   N
Sbjct: 179 TDKSKKHRGISAFIVERTMP-----GFSSRAIKGKLGIRAGNTGELFFDNV---RVPKEN 230

Query: 304 VSTGPVEDMKILIY-LDSAIMSVS----GMRVSLAEA-IHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD+   +V+    G+ ++  EA + Y   R   G  +    ++++
Sbjct: 231 LLGEEGEGFKIAMSALDNGRFTVAAGACGLIMACLEASVKYCHERQTFGKEIGRHQLVQQ 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++   +  +  L ++     ++ +  + E + A+ MA       C  A     +A++
Sbjct: 291 MIANMEAGLQMSRLLVYKAGFLKNKGRRNTRETSLAKWMA-------CDFANKAADDAVQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY  E  + R+ R S A  I  G+
Sbjct: 344 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 372


>gi|78065380|ref|YP_368149.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383]
 gi|77966125|gb|ABB07505.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
          Length = 395

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           ++E      +   +LE G   GL    +  K+G R++ T E+     F     L+ +++ 
Sbjct: 184 KLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  +  R++V      G  L    ++++ +
Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  +  +   A + +
Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDML 349

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 350 GGNGISDEFGVARH 363


>gi|311108193|ref|YP_003981046.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762882|gb|ADP18331.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 397

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
            GLTE   G+D   + ++  K +DG Y +SG+K W  +SP++D F++ A+      +G++
Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTADG-YKVSGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
             F++ + ++     GL    +  K+G R++ T E+   E   +   ++  ++   GP  
Sbjct: 196 RGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVMDEVEISADQMMPGVSGLKGP-- 248

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  D
Sbjct: 249 ----FTCLNSARYGIAWGAIGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTD 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A     RL    DE  +  E       +  I K   C  A  +   A + +GG+G  
Sbjct: 305 ITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357

Query: 426 EERSIARH 433
           +E  +ARH
Sbjct: 358 DEFGVARH 365


>gi|327189524|gb|EGE56679.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 395

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+ DG Y LSG K W  ++P++D F++ A+ E  +   + 
Sbjct: 138 FGLTEPDHGSDPGSMATRARKV-DGGYSLSGSKTWISNAPIADIFVVWAKTEDNL---IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             +LE G   GL    +  K+G R++ T E+     F   + + N+  G          L
Sbjct: 194 GFILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTCL 249

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A +I+      
Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL    +E     E       +  I K   C  A  +   A + +GG+G  +E  IARH
Sbjct: 310 LRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIARH 362


>gi|332850707|ref|ZP_08432954.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332866992|ref|ZP_08437309.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332730544|gb|EGJ61860.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332734321|gb|EGJ65449.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 378

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|78048318|ref|YP_364493.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78036748|emb|CAJ24441.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 597

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +   DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+     DGS    N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVGRDGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y+R R     +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++ 
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454


>gi|121603369|ref|YP_980698.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592338|gb|ABM35777.1| isovaleryl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
          Length = 393

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 129 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 187

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              L+E G P     Q+L +K+G R + T EL F N       +LG+LN         K+
Sbjct: 188 TAFLIEKGMPGFSVAQKL-DKLGMRGSHTGELVFQNVEVPEQNILGNLNGGA------KV 240

Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A
Sbjct: 241 LMSGLDYERAVLTGGPLGIMQSVMDNVLPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             + ++ +A + D   +  +     R        WC + A  +  E ++  GG+GYI E 
Sbjct: 301 GRSFAYTVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGIQIYGGNGYINEY 358

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 359 PLGRLWRDAKLYEIGAGT 376


>gi|327440690|dbj|BAK17055.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 391

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 46/273 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR----- 252
           + +TE   G+D+  +T+    + DG  Y ++G K F+++  +SD  I+  + + +     
Sbjct: 133 IAMTEPGAGSDLQKMTTTA--VKDGSDYIVNGQKTFITNGILSDVIIIACKTDPKAVPAH 190

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
             V   ++ R +E     G    R  +K+G  S  T EL F N       LLG       
Sbjct: 191 NGVSLLIIERGME-----GFSRGRKLDKVGMHSQDTAELIFENVRVPAENLLG------- 238

Query: 308 PVEDMKILIYLD---------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             E+ K  +YL          +A+ +++  +  L   + Y + R   G     +P+ K  
Sbjct: 239 --EEGKGFLYLMQKLQQERLLTAVGAITAAKDMLDLTLQYVKEREAFG-----KPIGKFQ 291

Query: 359 IADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                L   A  A   ++  +F D+   R  E         + K+W   MA  +  E M+
Sbjct: 292 NTQFTL---AEIATQVKIGQTFVDDLILRHLEGQDLVTEVSMAKWWTTDMARKISVECMQ 348

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+EE  IAR +R+     I  GS   M
Sbjct: 349 LHGGYGYMEEYKIARRFRDIAVTPIFAGSNEIM 381


>gi|289664949|ref|ZP_06486530.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 382

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 138/311 (44%), Gaps = 43/311 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++  +     D  
Sbjct: 103 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  + P +D  ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 148 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 206

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL F+       N  G L G + V    ++  ++++      +  + M V L    
Sbjct: 207 SNTCELVFTDCQVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+ + + A  A  + +A + D  ++  ++AA A + 
Sbjct: 264 -YVHERKQFGEPIGSFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A     W       +  +A++ +GG+GYI +    R +R++    I  G+G + +  +L 
Sbjct: 323 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 372

Query: 457 LLEKGTNLFEQ 467
               G  LFE+
Sbjct: 373 ---IGRELFER 380


>gi|218673864|ref|ZP_03523533.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 500

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 137/299 (45%), Gaps = 47/299 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252
           + LTE   G+D+  + ++ ++ +DG Y + G K F++    DA      ++LA++     
Sbjct: 160 MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPA 219

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295
               +  FLVP+ L  +DGS    N L    L++K+G   + T  + + +          
Sbjct: 220 GTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGGEKGAI 279

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR-------H 343
           G+L+G+ N     +  M     +++A ++V    V++AEA     + YAR R        
Sbjct: 280 GWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKALAYARERTQGRAPGS 334

Query: 344 VSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMA 397
            + G+   +++ P + R +  +      + A+S+  A++ D ++   +   +   A ++ 
Sbjct: 335 TAAGMSSPIVEHPDVARMLLTMKALTQGSRAISYACAHALDMSRRAGDSRHWQERAALLT 394

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           PI K +       V +  ++  GG G+IEE   AR+ R++    I  G+     +D++ 
Sbjct: 395 PIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVT 453


>gi|138896969|ref|YP_001127422.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134268482|gb|ABO68677.1| Acyl-CoA dehydrogenase (short-chain specific) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 380

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           GL+E   G+D+A++ ++  K  D  Y L+G K W  +   ++ +++ A  +       + 
Sbjct: 124 GLSEPGAGSDVASMKTRAIKDGDH-YVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G    + + K+G RS+ T EL F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A+     A+ YA++R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A          + +A A++ A  T       A  V  +A++  GG+GY ++ 
Sbjct: 295 ARLLTYQAAWLESNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     L +  +L +
Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|41409792|ref|NP_962628.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118462700|ref|YP_884035.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254777353|ref|ZP_05218869.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41398624|gb|AAS06244.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118163987|gb|ABK64884.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 611

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 57/294 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+++         +E  ++++       +++ +      A+ YA+ R V G         
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393
                 +   P ++R++           AL    +   D A +   EA Y          
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLFTSTYQDAAVA---EALYGVDAELAVKV 395

Query: 394 -RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +M P+ K    + A A + E+++  GGSG++++  I ++ R+S  +S+  G+
Sbjct: 396 NDLMLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDSKIDSLYEGT 449


>gi|332971448|gb|EGK10402.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 380

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D +AI ++  +  D  Y L G K F+++   +D ++  A  +   G   +  
Sbjct: 125 LTEPHAGSDASAIRTRAVRKGD-RYILDGSKIFITNAGAADTYVTFAVTDPDQGSKGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVEL-------EFSNTFGFLLGDLNVSTGPVEDMK 313
            + +    GL   + + K+G   + T EL          N  G       ++   +   +
Sbjct: 184 FIVEKDTPGLIVGKKEKKMGLGGSNTSELILESAEVPVKNRLGREGQGYEIALSNLAGGR 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I   +  ++ S + V+ A    YA+ RH  G  +     ++  +ADIA ++ AA  L 
Sbjct: 244 IGIGAQALGIATSALEVATA----YAKERHQFGRPIGKLQAIQYKLADIATEVEAARLLI 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A  + E +   +E++ A++ A  T       A     EA++  GG GY  E  + R 
Sbjct: 300 YRAATLYQEGRPCRKESSMAKMFASDT-------AMKATVEAVQVFGGYGYTREYPVERL 352

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461
           +R++    I  G+     L +   L KG
Sbjct: 353 FRDAKITQIYEGTNEIQRLVIAGELLKG 380


>gi|284038403|ref|YP_003388333.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283817696|gb|ADB39534.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 386

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 32/260 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D   + +   +  D  + L+G K F++  +S     +A V  R G    P 
Sbjct: 124 GLTEPNTGSDAGNMRTTAHRDGDD-WVLNGAKNFITHGISG---HVAVVIARTGEPNTPH 179

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVED 311
                ++E G+P G    R ++K+G R++ T E+ F       + D      V  G ++ 
Sbjct: 180 NATAFIVERGTP-GFAGGRKEDKLGMRASETAEMIFQEC---RISDSQRLGAVGEGFIQS 235

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +K+L   D   +S++ + + +A      A+ YA+ R   G  + +   +   +AD+A  I
Sbjct: 236 LKVL---DGGRISIAALSLGIAYGAYDAAVAYAKEREQFGQPIANFQGISFKLADMATAI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+++ A   D  +  ++E+A A++ A  T       A +V  +A++  GG GY +
Sbjct: 293 EAAKLLTYQAAALKDAGEPVTKESAMAKLFASET-------AVSVANDAVQIFGGYGYTK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + + YR++   +I  G+
Sbjct: 346 DYPVEKFYRDAKLCTIGEGT 365


>gi|228997424|ref|ZP_04157043.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229005069|ref|ZP_04162793.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228756171|gb|EEM05492.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228762300|gb|EEM11227.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 571

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 30/295 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +++   I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPVENVLG------EVGKGHYVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L+D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++R A   DEA   +       ++ +   +   I K    +    ++ EA++  GG GY+
Sbjct: 319 AYRTAGVIDEAIHETNGDGSIMQKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGYM 378

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475
           +E  + R YR++  + I  G+     L V  +L K     G  + E  F  +E++
Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433


>gi|72384229|ref|YP_293583.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72123572|gb|AAZ65726.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 380

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 34/270 (12%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVE 250
           T   +G +GLTE   G+D A I ++   + DG + ++G K F+S+  S+    I++A V 
Sbjct: 114 TGTQVGCIGLTEPNAGSDAANIQTRA-VLKDGCWVINGAKTFISNSGSEITGPIVIAAVT 172

Query: 251 G-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           G        +  F+VP    +G+P G  + +  +KIG R + T EL F +       LLG
Sbjct: 173 GTRPDGRKEISNFIVP----NGTP-GFSHGKKLHKIGWRGSTTFELFFEDCAIPADHLLG 227

Query: 301 DLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           ++ V    +   V   +ILI      + +  ++ SL  ++ Y   R   G  L     ++
Sbjct: 228 EVGVGLRQTLSQVSTGRILI----GTLGLGILQGSLERSVRYMSERTAFGKTLNQFQSLQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A    AA  + +  A + DE +    +A+ A++ A        + A     +A+
Sbjct: 284 FKLADMATHAHAARLMLYDAAVAKDEGRPYDRQASMAKLFA-------TEKAMEAAHQAV 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG+G + E +++R + ++    I+ G+
Sbjct: 337 QIHGGNGIMTEYAVSRAFGDAKVLEIVEGT 366


>gi|71398820|ref|XP_802653.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70864406|gb|EAN81207.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 238

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 28/229 (12%)

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  DG Y L+G K W  +  ++D  ++ A+V+G++  F+V    E G+P   C  ++ +
Sbjct: 3   KKWGDGKYVLNGCKTWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGTKI-D 57

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLA 333
           K G RS+   +L F N       +L+ +    E+ K ++     L+   ++++ M + +A
Sbjct: 58  KCGMRSSQMCQLFFDNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLAAMAIGIA 111

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +        YA  R   G  + +   ++R IA+   +  AA AL++ ++ S     +   
Sbjct: 112 DRCVELMTRYASERQAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-- 169

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                R+ +   K +   +A  V    M+ +GG GY  E  + R +R++
Sbjct: 170 -----RLGSDAAKLFAAPVAKRVADNTMQVMGGMGYSREMPVERLWRDA 213


>gi|254691350|ref|ZP_05154604.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|256256535|ref|ZP_05462071.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260756960|ref|ZP_05869308.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260882772|ref|ZP_05894386.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297249891|ref|ZP_06933592.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|260677068|gb|EEX63889.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260872300|gb|EEX79369.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297173760|gb|EFH33124.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 384

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKMLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|226307441|ref|YP_002767401.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226186558|dbj|BAH34662.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 386

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 166/374 (44%), Gaps = 43/374 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G+   I+ R  E V   +  ++ AAR++   +L  
Sbjct: 25  PNAVEWDQTKHFPV--DVLRKAASLGMG-GIYIR--EDVGGSELSRVDAARIF--EELAK 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207
           G    PS+ +   +  M T      W    F  +       P   +   +G   LTE   
Sbjct: 78  G---DPSIAAYISIHNMVT------WMIDQFGNDEQRHKWVPGLCSMDQLGSYCLTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CFLVPRL 261
           G+D A ++++  +  D  Y L+G K F+S +  SD ++++A+  G  G      F+VP+ 
Sbjct: 129 GSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSDVYVVMART-GSAGAKGISAFIVPK- 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
               SP GL +   + K+G  +  T ++ F +       +LG+    +G    MK L   
Sbjct: 186 ---DSP-GLSFGANEVKMGWNAQPTRQVIFEDVRVPAANMLGEEG--SGFRIAMKGLNGG 239

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L+ A  SV G + +L +A+ Y   R   G  LI+   ++  +AD+  ++ AA  L +R 
Sbjct: 240 RLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQLADMRTELEAARTLLWRA 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + ++  S   E      +  + K +       V  +A++  GG GY+ E  I +  R+
Sbjct: 300 AAALEDGASDVVE------LCAMAKRFATDTGFDVANKALQLHGGYGYLAEYGIEKIVRD 353

Query: 437 SPANSILLGSGNAM 450
              + IL GS   M
Sbjct: 354 LRVHQILEGSNEIM 367


>gi|206971560|ref|ZP_03232510.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|206733545|gb|EDZ50717.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
          Length = 569

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 26/284 (9%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D ++A TS         + L+G K W  ++ M+D +++ A+    +  F+V 
Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314
           R  E G   GL  +  K  I   S AT+ LE       N  G       V  G    + I
Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L +  L  A  ++   + ++  ++ Y + R      L D  +++  IA++ +    A + 
Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELADFTMIQEKIANMIIATYGAESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++R A   DEA   S+E    +     I   + K    +    ++ EA++  GG GY++E
Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             + R YR++  + I  G+     L V  +L K     EQL  T
Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDT 419


>gi|71064890|ref|YP_263617.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71037875|gb|AAZ18183.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 395

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 118/257 (45%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  DG Y L+G K W  + P +D  ++ A+    +G   +
Sbjct: 128 LAMSETGAGSDVVSMKLKAEE-KDGHYVLNGSKMWITNGPDADVMMVYAKTNPELGAKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T E+ F+N     +   N+  G  E +K+L+  
Sbjct: 187 TAFIVEKGMEGFGTAQKLDKLGMRGSHTGEMTFNNV---EVPKENILGGLNEGVKVLMSG 243

Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              + A+++   V  M+  +   + Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 244 LDYERAVLAAGPVGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + +  + D    R+  A ++R +         WC + A  +  E ++  GG+GY  E  
Sbjct: 304 LYTVGKNLDMLDQRA--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R++R++    I  G+
Sbjct: 362 LGRYWRDAKLYEIGAGT 378


>gi|304312504|ref|YP_003812102.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798237|emb|CBL46459.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 385

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 30/297 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +H+ +      REY     AP     +   +G++E  GG+D+AA+ +  +   D 
Sbjct: 93  MCTPALHR-FGSDELKREY----LAPAIAGDMVGCIGVSEVAGGSDVAALKTTARSEGDD 147

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNK 278
            Y ++G K W  +   +D   +LA   EG V       +VP         G+ +Q+++ K
Sbjct: 148 -YVINGSKMWITNGTQADWCCLLANTSEGPVHANKSLIIVPM-----DAAGISHQKIE-K 200

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334
           IG  S+ T +L F N        + +  G    M+++ + +  + + SG   SL      
Sbjct: 201 IGMHSSDTAQLFFDNVRVPKRNRIGIE-GAGFMMQMIQFQEERLCAASGALKSLDRLIDL 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y + RH  G  LI+   +   +A++  ++    +L++R  N +   K  +  A+ A+
Sbjct: 260 TIEYCKERHTFGQPLINNQAIHFRLAELRTEVELLRSLTYRAVNEYISGKDVTRLASMAK 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           + A        ++   V    ++  GG G+  +  +++ YR+S   SI  G+   M+
Sbjct: 320 LKAG-------RLLREVSDSCLQYWGGMGFTYDNPLSQSYRDSRLISIGGGADEIML 369


>gi|299769523|ref|YP_003731549.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298699611|gb|ADI90176.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 378

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP      +  G    R+++K+G  ++ T  +   N     L +L    G  E  KI 
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLENCR-IPLENLVGQEG--EGYKIA 233

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       +  A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I AA
Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ +  
Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDFP 346

Query: 430 IARHYRESPANSILLGSGN 448
           + R YR+   + I  G+ +
Sbjct: 347 VERIYRDVRVSQIYEGASD 365


>gi|134055821|emb|CAK37343.1| unnamed protein product [Aspergillus niger]
          Length = 437

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K +DG Y ++G K ++++ M S  F++ A ++   G   +  
Sbjct: 178 LSEPASGSDAFALKTKAEKTADG-YKINGSKMWITNAMESGVFLVFANLDPSKGYKGITA 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + +    G    + + K+G R+++T  L F +    L+   N+     +  K  I  L+
Sbjct: 237 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILN 293

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373
              + ++     LA      A  Y        G LI +   M+  +A    +IAAA AL 
Sbjct: 294 EGRIGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALV 353

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    + 
Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMGGMGFVREGIAEKM 406

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +  LL+K
Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|118468177|ref|YP_884524.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169464|gb|ABK70360.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 379

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 24/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+    ++  DG + L+G K W      +D + + A+  EG  G  CFL
Sbjct: 127 LSEPQAGSDAAALRCAARRDGDG-FVLNGSKAWITHGGRADFYTLFARTGEGSKGVSCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP     G   GL + + + K+G  +  T    + N    +  D  + T           
Sbjct: 186 VP-----GDLPGLSFGKPEEKMGLHAVPTTSAFYDNAR--IDADRLIGTEGQGLSIAFSA 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++ + V +A     EA+ YA  R   G  +ID   +   +AD+A  + +A A 
Sbjct: 239 LDSGRLGIAAVAVGIAQAALDEAVRYAHERTTFGRKIIDHQGLGFLLADMAAAVVSARAT 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D     S +A+ A+++A          A  V  +A++ +GG GY  +  + R
Sbjct: 299 YLDAARRRDAGLPYSSQASVAKLVA-------TDAAMKVTTDAVQVLGGVGYTRDFRVER 351

Query: 433 HYRESPANSILLGS 446
           + RE+    I  G+
Sbjct: 352 YMREAKITQIFEGT 365


>gi|126173735|ref|YP_001049884.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|217974012|ref|YP_002358763.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|125996940|gb|ABN61015.1| Butyryl-CoA dehydrogenase [Shewanella baltica OS155]
 gi|217499147|gb|ACK47340.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 385

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++  Q + + DG  Y +SG K F+S   +   +++    G+ G   +  
Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           +       G+ Y + ++K+G  +  T ++ F N       LLG+     G    MK L  
Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  R
Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R
Sbjct: 299 LA-AFKLDSHDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|295697789|ref|YP_003591027.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295413391|gb|ADG07883.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 382

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE + G+D AAIT++ ++   G Y + G K F+++   +D +++ A +    G   +  
Sbjct: 125 LTEPQAGSDAAAITTRARREPGG-YRIDGQKVFITNGGEADLYLIFANLNPEAGRRGITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            L +    GL   + + K+G   +AT EL F +     + +     G  E  ++ +  LD
Sbjct: 184 FLVEADNQGLIIGKKERKMGLNGSATTELIFEDC---RVPESARLGGEGEGYRVAMSLLD 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AE     A  Y + R   G  + D   ++  +AD A +I AA  L +
Sbjct: 241 GGRIGIAAQALGIAEGALELARAYVKERQQFGRRIGDFQGVQFILADRAAEIEAARLLVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A    +    ++EAA A++ A  T       A  V  +A++  GG GYI++  + R+ 
Sbjct: 301 RAATMRAKGLPCAKEAAMAKLYASDT-------AMRVTVDAVQLHGGYGYIKDYGVERYM 353

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 354 RDAKVTQIYEGT 365


>gi|295103292|emb|CBL00836.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii SL3/3]
          Length = 637

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +      D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F+N     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A++       +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++   + R YR++   ++  G+
Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365


>gi|169334815|ref|ZP_02862008.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257553|gb|EDS71519.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM
           17244]
          Length = 378

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +    Q + + DG  Y L+G K F+++   +D +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASG--QQTKAVLDGDEYVLNGSKIFITNGKEADTYVIFAMTDKSKGTKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   ++E G+P G  +   + K+G R ++T EL F++       LLG      G      
Sbjct: 181 ISAFIVEKGTP-GFTFGTKEKKMGIRGSSTYELIFTDCRIPKENLLGQEGRGFGIA---- 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + ++   + LA+      I + + R   G  +      +  IAD+A  + A
Sbjct: 236 -MQTLDGGRIGIACQALGLAQGALDATIEFVKERKQFGRPIAKFQNTQFQIADMATKVEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A + D  K  S EAA A++       +  ++A  V  +A++  GG GY  E 
Sbjct: 295 ARNLVYKAAIAKDTKKRFSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGYTREY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 DVERMMRDAKITEIYEGT 365


>gi|326566643|gb|EGE16784.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis 12P80B1]
          Length = 559

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 36/289 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFVNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406
            ++  +           AL + L++ F +  ++ E   E  +A     ++ PI K +  +
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSD-FADTVAKGENPSEVKFADEMLSLLTPIAKAFLTE 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                    ++  GG GYI E  + ++ R++  + +  G+     LD+L
Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLL 451


>gi|313901691|ref|ZP_07835122.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
 gi|313468042|gb|EFR63525.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
          Length = 396

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 36/279 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D AA+ +    + DG  Y L+G K F+S+  ++D +++ A  +   G   + 
Sbjct: 128 LTEPDAGSDAAALKTTA--VRDGEHYVLNGRKTFISNGGVADLYVVFAVTDPAAGSRGIS 185

Query: 260 R-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
             L+E G+P GL + +   K+G R++AT ++        +L  + V   P E++      
Sbjct: 186 AFLVEKGTP-GLSFGKPFKKMGIRASATTDV--------ILEQVRV---PAENLIGREGQ 233

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI L  LD+  + +    V +A+A     + YA +R   G  +     ++  +AD+A 
Sbjct: 234 GYKIALATLDNGRVGIGAQAVGIAQAALDRAVAYAGQRRQFGRPIGSFQGIQFKLADMAT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A  +D++      A+    MA   K +  ++A  V  EA++  GG GY
Sbjct: 294 QVEAARLLVYRAAVLYDQSVHTGRRASKEIAMA---KLFASEVAMKVTTEAVQIHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKG 461
           +++  + R  R++    I  G+     MV+    L E G
Sbjct: 351 LQDFEVERLMRDAKITQIYEGTSEVQRMVIARALLAEAG 389


>gi|300087514|ref|YP_003758036.1| acyl-CoA dehydrogenase domain-containing protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527247|gb|ADJ25715.1| acyl-CoA dehydrogenase domain protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 382

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 16/256 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259
           LTE+  G+D  A+ +   K ++G Y L+G K F+++   ++ + ++A  + G+    L  
Sbjct: 124 LTEESAGSDAGAVKTTAVK-TEGGYLLNGSKRFITNGGDAELYTVIACTDPGKGARGLSA 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            ++E G P G  + R + K+G R+++T EL F++       L+G   +  G    MK+  
Sbjct: 183 FIVEKGIP-GFTFGRKEKKMGIRASSTRELLFNDCLVPAENLIGREGM--GFFHTMKLFE 239

Query: 317 YLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                I S  V   + +   AI +AR R   G  + +   ++  +A++A+DI AA AL +
Sbjct: 240 KSRPGIGSQAVGIAQGAFEAAIDHARNRVQFGEPVFNFQAVQHMLANMAMDIEAARALVY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A + D    +S       + + ++K +   ++  V  +A++ +GG GY+ +  + +  
Sbjct: 300 ASARTIDSGLQKS-----GNLESAMSKVYASDVSMRVATDAVQILGGVGYMRDYPVEKFM 354

Query: 435 RESPANSILLGSGNAM 450
           R++    I  G+   +
Sbjct: 355 RDAKITQIYEGTNQVL 370


>gi|289608274|emb|CBI60621.1| unnamed protein product [Sordaria macrospora]
          Length = 365

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 45/307 (14%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           + +A   +P     + PK+ S E+  +             L ++E   G+D+ ++  +  
Sbjct: 97  NQIARWGSPEQKAKYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAD 143

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           K+ DG Y L+G K W  ++P +   ++ A+     G   +   L +    G    +  +K
Sbjct: 144 KV-DGGYRLNGTKFWITNAPYAATLVVYAKSAPDAGSKGITAFLIEKDFAGFSIGQKIDK 202

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G R + T EL F++ F             V D  ++        ++  M+  L   + Y
Sbjct: 203 MGMRGSPTAELVFNDCF-------------VPDDNVM-----GRSTLGLMQACLDTVLPY 244

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +    +M+  IAD+++ + +A A  + +A + D  ++   +AA A ++A 
Sbjct: 245 VAERKQFGKPIGAFQLMQGKIADMSVALNSARAYVYAVAKACDAGRTTRHDAAGAILLA- 303

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--- 455
                  + A  V  +A++ +GG+GY ++  + R+YR+  A  + +G+G   V  +L   
Sbjct: 304 ------SENAVKVANDAIQALGGAGYTKDWPVERYYRD--AKLLDIGAGTNEVRRMLIGR 355

Query: 456 NLLEKGT 462
            LL +GT
Sbjct: 356 ELLGEGT 362


>gi|260907811|gb|ACX53707.1| isovaleryl coenzyme A dehydrogenase [Heliothis virescens]
          Length = 416

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 17/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +   +    
Sbjct: 156 LAMSEPGAGSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDTSSKPQHG 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   L+E G P     Q+L +K+G R + T EL F +       +LG++N     +    
Sbjct: 215 ISAFLIEKGFPGFSTAQKL-DKLGMRGSNTCELVFEDCKVPATNILGEVNKGVYVLMSGL 273

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  A   V  M+ ++  A  YA  R   G  + +  +++  +AD+   ++A  +  
Sbjct: 274 DLERLVLAAGPVGLMQAAIDTAFAYAHTRKQFGKSIGEFQLLQGKMADMYTTLSACRSYL 333

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + DE    S++ A   +       +C + A  V  +A++ +GG+GYI +    R 
Sbjct: 334 YSVAKACDEGHVNSKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYPTGRI 386

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++    I  G+G + V  +L
Sbjct: 387 LRDAKLYEI--GAGTSEVRRML 406


>gi|269126209|ref|YP_003299579.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311167|gb|ACY97541.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 382

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 43/274 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG--RVGC 255
            GLTE  GG+D+        ++ DG + ++G K F+++  +D  AF  +A + G   +  
Sbjct: 124 FGLTEPGGGSDVPGGMRTTARLEDGHWVINGSKAFITNSGTDITAFTTVAALTGEREIST 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
            LVP    +G+P G    R  +K+G  ++ T EL F+        D+ V   P E++   
Sbjct: 184 ILVP----NGTP-GFTVGRKYSKVGWAASDTRELSFA--------DVRV---PQENLVGE 227

Query: 313 ------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 + L  LD   ++++ + V LA     E + Y R+R   G  + +   ++  IAD
Sbjct: 228 RGRGYAQFLQILDEGRIAIAALSVGLAQGCVDECLRYVRQRQAFGRAIGEYQAIQFKIAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +      A    +  A      +   +EAA A++ A          A     EA +  GG
Sbjct: 288 MEARTHTARLAYYAAAAKMLAGEPFKKEAAIAKLTA-------SNAAMDNAREATQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G++ E  + R YR+  A  + +G G + V  +L
Sbjct: 341 YGFMNEFPVGRFYRD--AKILEIGEGTSEVQRML 372


>gi|317025737|ref|XP_001389698.2| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus
           niger CBS 513.88]
          Length = 438

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K +DG Y ++G K ++++ M S  F++ A ++   G   +  
Sbjct: 179 LSEPASGSDAFALKTKAEKTADG-YKINGSKMWITNAMESGVFLVFANLDPSKGYKGITA 237

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + +    G    + + K+G R+++T  L F +    L+   N+     +  K  I  L+
Sbjct: 238 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILN 294

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373
              + ++     LA      A  Y        G LI +   M+  +A    +IAAA AL 
Sbjct: 295 EGRIGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALV 354

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    + 
Sbjct: 355 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMGGMGFVREGIAEKM 407

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +  LL+K
Sbjct: 408 FRDSKIGAIYEGTSNIQLQTIAKLLQK 434


>gi|188592185|ref|YP_001796783.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938559|emb|CAP63546.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 391

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 41/283 (14%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VEGR 252
           A+   L+E+  G+D +AI +   +  DG + + G K W  +   S  FI+ A+   V  R
Sbjct: 123 AVNFALSEREAGSDPSAIQATAVREGDG-WRIRGEKCWLGNGGHSKHFIVFARTGDVAAR 181

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  F+VPR  E     GL     ++K+G R   T  L       ++  D  V  GP  
Sbjct: 182 KAISAFVVPRDTE-----GLVVDFYEDKMGIRGTTTTNLRLDV---WVPADSIV--GPEG 231

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRA 358
           D      L  A+ +++  RV +A             A  YA  R   G  LID   +   
Sbjct: 232 DG-----LKLALATLTVGRVVVAAQANGIALCAYDAARRYAVTRKTFGHTLIDHQGVGFK 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD A+ ++AA   ++  A  +DE K           +  + K +  + +  V+ +A++ 
Sbjct: 287 LADAAMHLSAARMFTYEAARGYDEGKDIG-------TLGAMAKLYASEASHDVVDDAVQI 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +GG GY++   + R YR+     I  G+     + +   + KG
Sbjct: 340 LGGRGYVKPNVVERCYRDQRIVEIYEGTSEIQRIVLARAVRKG 382


>gi|13474683|ref|NP_106252.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025438|dbj|BAB52038.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 408

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 25/291 (8%)

Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG 230
           AP I  +  E       P   T   IG + +TE   G+D+  + ++ +K  DG  Y ++G
Sbjct: 124 APYILHYGSEEQKKKWLPKLATGELIGAIAMTEPGAGSDLQGVKTRAEK--DGNQYRING 181

Query: 231 HKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++     FI++       +G  G  L+  ++E     G    R  +KIG ++N T
Sbjct: 182 SKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFERGRNLDKIGLKANDT 239

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
            EL F++       LLG      G ++ M+ L    L     +++ +  +LA  I Y + 
Sbjct: 240 SELFFNDVRVPTSNLLGH-EEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIEYVKE 298

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +ID    +  +A++  +              +++  +R        + A + K
Sbjct: 299 RKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVTRHINGGLDPVTASMAK 351

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           YW   +   V+ E ++  GG GY+ E  IAR +R++    I  G+   M L
Sbjct: 352 YWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 402


>gi|83747332|ref|ZP_00944373.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|83726032|gb|EAP73169.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
          Length = 385

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           I   LTE   G+D A++ ++     D  Y ++G K F++ +P + AF ++A+  G     
Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           +  F+VP         G+   +   K+G R   T ++   N   +   L+G +    G  
Sbjct: 179 ISAFIVP-----ADTPGIMLGKPDRKMGQRGTKTCDVMLDNVRVSAANLIGGV-AGQGFK 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + +S +   +A     +A  YA+ R   G  + D  +++  +AD   
Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAAAYAKARRQFGRPIADFQLIQAMLADSQA 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  ++    A  +D AK          ++A   K +C +M   V   A++  GG+GY
Sbjct: 290 ELYAGLSMVRDGARRYD-AKPAGRPDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348

Query: 425 IEERSIARHYRE 436
           I E  + R YR+
Sbjct: 349 IAEYKVERFYRD 360


>gi|254246209|ref|ZP_04939530.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124870985|gb|EAY62701.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 395

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLQENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               L+ +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|126642911|ref|YP_001085895.1| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978]
          Length = 548

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 164/405 (40%), Gaps = 55/405 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 86  SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 132

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ ++  DG Y ++G K F++   +D       ++LA+          +  F+VP+ L 
Sbjct: 133 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 192

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 193 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 252

Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365
              I  +     +   A  YA    + R  +G          IL+   V +R + ++  +
Sbjct: 253 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 311

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 312 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 371

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 372 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 431

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
                +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 432 DLDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 476


>gi|63101332|gb|AAH94479.1| LOC734152 protein [Xenopus laevis]
 gi|77748232|gb|AAI06211.1| LOC733389 protein [Xenopus laevis]
 gi|122936449|gb|AAI30051.1| LOC733389 protein [Xenopus laevis]
          Length = 417

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 25/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV--GCF 256
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +  V     
Sbjct: 157 LAMSEPNSGSDVVSMKLKAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDLSVQPARG 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPV 309
           +   L+E G+P     Q+L +K+G R + T EL F        N  G L   + V    +
Sbjct: 216 ITAFLVEKGTPGFSTAQKL-DKLGMRGSNTCELVFEDCKIPKENILGHLGKGVYVLMSGL 274

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            D++ L+ L    + +  M+  L  AI Y   R   G  +    +M+  +AD+   +AA 
Sbjct: 275 -DLERLV-LSGGPLGI--MQAVLDHAIPYMHTREAFGQKIGHFQLMQGKMADMYTRLAAC 330

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               + +A + D+  +  ++ A   +       +  + A  V  + ++C+GG+GYI +  
Sbjct: 331 RHYVYNVAKACDQGHADPKDCAGVIL-------YSAESATQVALDGIQCLGGNGYINDYP 383

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + R  R++    I  G+G + V  ++
Sbjct: 384 MGRFLRDAKLYEI--GAGTSEVRRII 407


>gi|254387179|ref|ZP_05002447.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345992|gb|EDX26958.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 383

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 55/307 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   T    + W P++ S +              A+G  GLTE   G+D   + ++
Sbjct: 95  AKTIAAWGTEEQKRAWLPRLCSGD--------------ALGCFGLTEPGTGSDAGNLDTR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y LSG K F+++   +D  ++ A+     G      FLVP      SP GL 
Sbjct: 141 AVRDGDA-YLLSGSKMFITNGTWADVVLLFARTSDAPGHRGVSAFLVP----TDSP-GLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMS 324
            + +  K+G R  AT EL        +L  + V      GP E     + + +     MS
Sbjct: 195 RREIHGKLGLRGQATAEL--------VLDGVRVPASAMLGP-EGKGFSVAMSALAKGRMS 245

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V +A+     A+ YA +R   G  +    +++  IADI++D+ AA  L++R+A+ 
Sbjct: 246 VAAGCVGIAQAALDAAVSYAAQREQFGKTIAHHQLVQELIADISVDVDAARLLTWRVADL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     + E++ A++ A        + A    + A++  GG GYI+E    +  R++  
Sbjct: 306 IDRGLPFATESSTAKLFA-------SEAAVRAASNALQVHGGYGYIDEYPAGKLLRDARV 358

Query: 440 NSILLGS 446
            ++  G+
Sbjct: 359 MTLYEGT 365


>gi|169633254|ref|YP_001706990.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii SDF]
 gi|169152046|emb|CAP00930.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii]
 gi|193077720|gb|ABO12576.2| putative acyl CoA dehydrogenase oxidoreductase protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 378

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WILNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|126433697|ref|YP_001069388.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233497|gb|ABN96897.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 388

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 157/387 (40%), Gaps = 66/387 (17%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +LR +   G+  +I+ R  E V      ++ A R++   QL A
Sbjct: 27  PYASEWDESHHFPT--DVLREAAELGM-AAIYCR--EDVGGSGLRRVDAVRIF--EQLSA 79

Query: 149 GH-----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                   +S     A MV    +    K W P++ S E            S+A    LT
Sbjct: 80  ADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME------------SIA-SYCLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPR 260
           E   G+D +A+ ++  +  D  + L G K F+S +  SD ++++A+   EG  G  +   
Sbjct: 127 EPGAGSDASALRTKAVREGDH-FVLDGVKQFISGAGSSDVYVVMARTGSEGPRG--ISAF 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLN 303
           ++E  +P G+ +   + K+G  +  T ++ F                    FG  +  LN
Sbjct: 184 VVEKDTP-GVSFGAQEQKMGWNAQPTAQVVFEGARVPAENMLGGTDAEGSGFGIAMNGLN 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         L+ A  S+ G + +  +A  Y   R   G  L+D+P ++  +AD+A
Sbjct: 243 GGR-----------LNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTIRFTLADMA 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             +  +  L +R A + DE      E      +  + K +       V  +A++  GG G
Sbjct: 292 TALQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQALQLHGGYG 345

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  I +  R+   + IL GS   M
Sbjct: 346 YLREYGIEKIVRDLRVHRILEGSNEIM 372


>gi|62317167|ref|YP_223020.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269149|ref|YP_418440.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022426|ref|YP_001932167.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237816726|ref|ZP_04595718.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254698445|ref|ZP_05160273.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731893|ref|ZP_05190471.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260544401|ref|ZP_05820222.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260759666|ref|ZP_05872014.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260762908|ref|ZP_05875240.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62197360|gb|AAX75659.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82939423|emb|CAJ12380.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021000|gb|ACD73721.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237787539|gb|EEP61755.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260097672|gb|EEW81546.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260669984|gb|EEX56924.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260673329|gb|EEX60150.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 384

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVGCF 256
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADG-- 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E  SP GL   +   K+G +   T ++ F N       L+G +    G    MK
Sbjct: 181 ISAFIIERNSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTAMK 238

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA  
Sbjct: 239 MLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKC 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +I 
Sbjct: 299 MVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIE 351

Query: 432 RHYRE 436
           R YR+
Sbjct: 352 RFYRD 356


>gi|302652212|ref|XP_003017962.1| thermophilic desulfurizing enzyme family protein [Trichophyton
           verrucosum HKI 0517]
 gi|291181555|gb|EFE37317.1| thermophilic desulfurizing enzyme family protein [Trichophyton
           verrucosum HKI 0517]
          Length = 431

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ ++ + + DG + L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKNFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG LN      + +++L+    L+  ++S      M+  L   + Y   R   G 
Sbjct: 262 PHANVLGQLN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D++   S+ A            +  + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSSDGAQVKTQDCAGAILYAAER 375

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414


>gi|167766343|ref|ZP_02438396.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1]
 gi|317496770|ref|ZP_07955100.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167711934|gb|EDS22513.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1]
 gi|291559253|emb|CBL38053.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SSC/2]
 gi|316895782|gb|EFV17934.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 383

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252
            GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A     +  GR
Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGSYADVYIVIAVTGVVEKRGR 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
               +   ++E G+P G  +   + K+G R +AT EL F +       LLG      G  
Sbjct: 181 KMKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFEDCRIPKENLLGKQGKGFGIA 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + ++   + LAE      I Y + R   G  +      +  +AD+A 
Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALERTIEYVKERKQFGRSIGQFQNTQFQLADMAT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L ++ A +    K  S EAA A++       +  ++A  V  +A++  GG GY
Sbjct: 295 KVEAAKQLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E  + R  R++    I  G+
Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369


>gi|37676701|ref|NP_937097.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
 gi|37201244|dbj|BAC97067.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
          Length = 389

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 151/364 (41%), Gaps = 35/364 (9%)

Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164
           + ++WD + F PV V K+A ++    LY         M++L+A  +    S+   S  A 
Sbjct: 32  NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 91

Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           MT   +H   +W    F ++E        +    +     LTE   G+D A++ +   + 
Sbjct: 92  MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGDLLGSYCLTEPNSGSDAASLKTTATRQ 148

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D  Y ++G K F+S       +++    G  G   V   +      G+ Y R + K+G 
Sbjct: 149 GDE-YRINGAKAFISGAGETQVLVVMARTGSEGAKGVSAFVVPADAQGVSYGRKEPKMGW 207

Query: 282 RSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            S  T  + F N        LG+       +   ++  +I I    A  SV   + +L  
Sbjct: 208 NSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQQALNL 263

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y + R   G  L +   ++  +AD+A ++ AA  L    A+  D  K   +  AY  
Sbjct: 264 ATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFSASKLD--KGDPDATAYC- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G+   M L V
Sbjct: 321 ---AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEIMRLIV 377

Query: 455 LNLL 458
              L
Sbjct: 378 ARRL 381


>gi|300023493|ref|YP_003756104.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525314|gb|ADJ23783.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 589

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   G+D+  +T++     DG Y ++G K F++     M++  I L         A
Sbjct: 161 MNLTEPHAGSDLGPLTTRAVPQDDGTYRITGTKIFITYGEHDMAENIIHLVLARRPDAPA 220

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299
              G +  FLVP+ L  +DGS    N +    +++K+G  ++ T  ++F       G+L+
Sbjct: 221 GTRG-ISLFLVPKFLVNDDGSLGERNDVVCAGVEHKLGIMASPTCVMKFGENGGATGYLI 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGIL 349
           G+ N          + + +++A + V    V +AE     AI YAR R       S G  
Sbjct: 280 GEENRGLA-----TMFVMMNAARLGVGLQGVGVAERATQHAIAYARERRQGKSLASNGSS 334

Query: 350 IDQPV-----------MKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARI 395
              P+           M +A+   A  I  ATA      RL+N   E K+  ++AA   +
Sbjct: 335 GMSPIIEHADIRRMLLMMKALTQAARMICFATAREHDIARLSNDPSERKAALDKAA---L 391

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +   +A  V +  ++  GG G++EE   A++ R++    I  G+     +D++
Sbjct: 392 LTPLAKAFSTDIANEVASLGVQVHGGMGFVEETGAAQYLRDARILPIYEGTNGIQAIDLV 451

Query: 456 N 456
            
Sbjct: 452 T 452


>gi|332878891|ref|ZP_08446606.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683242|gb|EGJ56124.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 380

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 41/299 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  G+TE   G+D   + +   K  D  + L+G K
Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDS-WVLNGAK 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            F++   S    ++    G  G    +    +E G+P G    + +NK+G R++ T EL 
Sbjct: 155 NFITHGKSGQIAVVIARTGEKGDKHAITAFAVERGTP-GFSSGKKENKLGMRASETAELV 213

Query: 291 FSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
           F +     + D N    V  G ++ MKIL   D   +S+  + + +A+     A+ YA+ 
Sbjct: 214 FQDC---RIPDANRLGEVGEGFIQAMKIL---DGGRISIGALSLGIAKGAYEAALKYAKE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  LI+   +   +AD+A +I A+  L  + A      K+  +    +  MA   K
Sbjct: 268 RVQFGKRLIELQGVGFKLADMATEIEASELLLHKAAYQ----KNNHQRVTLSGAMA---K 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  +M   V  EA++  GG GY ++  + + +R+S   +I  G+     L +   ++K
Sbjct: 321 MYSSEMCVRVATEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQIDK 379


>gi|241763038|ref|ZP_04761099.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367821|gb|EER62053.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 377

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 17/251 (6%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ-VEGRVGCFLV 258
           GLTE +GG+D+   T++  +   G + L G K F+++   ++ +++ A+  E R G FLV
Sbjct: 122 GLTEPKGGSDLMGATTRAVRDGSG-WVLDGTKRFITNGGWAEWYLIFARTTEKRFGLFLV 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            +     +  G+ +   + K+G R + T ++           LLGD       +    + 
Sbjct: 181 HK-----NDPGVSFGAPERKMGMRGSPTSDVILDAVKLPADRLLGDPERGAEYITQALLR 235

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A  ++     +L E + Y   R   G  +    +++  +AD+A+ + +A A   R
Sbjct: 236 SRLHIASHALGIAAGALEETLRYTGEREQFGKPIARFQMVRSMVADMAIRVESARATLHR 295

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
             + +     +      A+++A I K  C   A AV  +A++  GG GY+E+ ++ R  R
Sbjct: 296 AVSLYQAGDPQ------AKMLASIAKVLCSDAAMAVTTDAVQLHGGYGYLEDYAVERMMR 349

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 350 DAKVTQIWEGT 360


>gi|311899897|dbj|BAJ32305.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 380

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 39/290 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P++ + E             +  G  L+E + G+D AA+  + + + DG Y
Sbjct: 105 TPEQRERWLPRMLAGE-------------LVGGYSLSEPQAGSDAAALNCKAEPV-DGGY 150

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++G K W      +D + + A+       V CFL P     G   GL +   + K+G  
Sbjct: 151 RITGTKAWITHGGKADFYALFARTAPGPHGVSCFLAP-----GRVEGLTFGPPEEKMGLN 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----I 336
           +  T    +    G LL    +     + + I    LDS  + ++     LA+A     +
Sbjct: 206 AVPTTAAYWD---GALLERDRLIGAEGQGLPIAFSALDSGRLGIAACATGLAQAALDHAV 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  ++D   +   +AD+A  + ++ A     A   D  +  S +A+ A+++
Sbjct: 263 AYANERTTFGRRIVDHQGLGFLLADMAAAVDSSRATYLDAARRRDLGRPFSRQASVAKLV 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A          A  V  +A++ +GG GY  +  + R+ RE+    I  G+
Sbjct: 323 A-------TDAAMKVTTDAVQVLGGYGYTRDFPVERYMREAKIMQIFEGT 365


>gi|296271278|ref|YP_003653910.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296094065|gb|ADG90017.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 610

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 162/375 (43%), Gaps = 62/375 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++     DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAIPQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  FLVP+ L D         NG+    ++ K+G + + T EL F       G+L+G 
Sbjct: 224 KGLSMFLVPKYLVDLETGELRERNGVYVTNVEKKMGLKVSTTCELRFGEKHPAIGYLVG- 282

Query: 302 LNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----------- 347
            NV  G +  M ++I    +     +++ +      A+ +A+ R V G            
Sbjct: 283 -NVHDG-IRQMFLVIEHARMMVGTKAIATLSTGYLNALEFAKNR-VQGADMTQMADKTAP 339

Query: 348 --ILIDQPVMKRAIADIALDIAAATAL--------SFRLANSFDEAKSRSEEAAYA--RI 395
              +   P ++R   ++ L  A A  +        +F+ A    EA+ R +  A A   +
Sbjct: 340 RVTITHHPDVRR---ELMLQKAYAEGMRALVIYTSTFQDAVQIAEAEGRDDADAKAMNDL 396

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K    + +  ++A +++ +GGSG++++  I ++ R+S  +S+  G+     +D+ 
Sbjct: 397 LLPIVKGMGSERSYEMLARSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQGMDLF 456

Query: 456 --NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK-----I 508
              ++        QL+S ++    S        L++   L  E     + + +K     I
Sbjct: 457 FRKIVRNQGKALGQLYSEIKAFAASDAGN--GRLKEERKLLDEAADEVKAMVDKMVGWAI 514

Query: 509 ALASSAAALYRAGMN 523
           A A +   +Y+ G+N
Sbjct: 515 ASAETPKEIYKVGLN 529


>gi|73998964|ref|XP_535048.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short/branched chain
           specific, mitochondrial precursor (SBCAD) (2-methyl
           branched chain acyl-CoA dehydrogenase) (2-MEBCAD)
           (2-methylbutyryl-coenzyme A dehydrogenase)
           (2-methylbutyryl-CoA dehydrogenase)... [Canis
           familiaris]
          Length = 521

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 32/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D+ A+ ++  K  +  Y ++G K W  ++  +  F+++  V   +G     C
Sbjct: 265 LSEAGAGSDLFALKTRADKKGN-YYVINGSKMWISNAEYAGLFLVMVNVNPDLGYKGLTC 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R  E     GL   + + K+G R+++T  L F N       +LG   +  G    +
Sbjct: 324 FVVDRDTE-----GLHIGKSEKKMGIRASSTCALTFENVKVPESNILG--QIGHGYKHAI 376

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            IL   +   + ++   + LA+      + Y + R   G  + D   ++  +A +A  + 
Sbjct: 377 GIL---NEGRIGIAAQMLGLAQGCFDYTVPYMKERMQFGKRIFDFQGLQHQVAHVATQLE 433

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L++  A   +  K   +EA+ A       KY+  ++A    ++ +E +GG GY ++
Sbjct: 434 AARLLTYNTARLLETGKPIIKEASMA-------KYYAAEVAGLTTSKCIEWMGGVGYTKD 486

Query: 428 RSIARHYRESPANSILLGSGN 448
             + +++R++   +I  G+ N
Sbjct: 487 YPVEKYFRDAKIGTIYEGTSN 507


>gi|33603557|ref|NP_891117.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577682|emb|CAE34947.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255
           LTE   G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A+   E R   + C
Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV    E G+P G+   +   K+G     T ++ F N       LLG     TG    M
Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGG-KEGTGFRTSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  IAD   ++ 
Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA ++    A   D  ++ + EAA        +K +  +M   V   A++  GG+GYI E
Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAA-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346

Query: 428 RSIARHYRESPANSILLGS 446
            ++ R YR+     I  G+
Sbjct: 347 YAVERFYRDVRLFRIFEGT 365


>gi|311693899|gb|ADP96772.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 383

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 31/308 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGG 208
           ++M  S   A  ++ M      + W PK+ S E              A+G + +TE   G
Sbjct: 88  NVMVHSDIVAPYLSHMGNEEQRQQWLPKLVSGE--------------AVGAIAMTEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ AI +   K  D  Y L+G K F+++   +D  I+ A+ + + G   +   L D S 
Sbjct: 134 SDLQAIRTSAVKDGDE-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVDTSL 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAI 322
            G    R  +KIG  S  T EL FS+       LLG+     G V  MK L    L    
Sbjct: 193 PGFSKGRNLDKIGQHSGDTSELFFSDMRIPASALLGE--EGQGFVYLMKELPRERLVIGA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V+  R SL   I YA+ R + G  L      +  IA +  D     A   +  + +D 
Sbjct: 251 LGVAAARGSLDLTIAYAQERELFGQKLAQLQNTRFEIARMETDYRVNKAFVDQCIDQYDL 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +  A+ A       KY   +M   V    ++  GG GY  E  I+R + ++    I
Sbjct: 311 GELDAPTASMA-------KYSATEMQCRVADGCLQLFGGYGYTTEYPISRAFIDARVQRI 363

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 364 YGGTSEVM 371


>gi|229096830|ref|ZP_04227800.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228686672|gb|EEL40580.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 569

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERACE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   D+A   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|183222662|ref|YP_001840658.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912694|ref|YP_001964249.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777370|gb|ABZ95671.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781084|gb|ABZ99382.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 558

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 134/329 (40%), Gaps = 43/329 (13%)

Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG L++ P + S +++   T  + +K W P + S E                G+ +TE  
Sbjct: 241 AGSLITRPEIMSKALLKGGTEEQKNK-WLPLLASGEK-------------FAGIMVTEPN 286

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLVP 259
            G+D+A ++   +++  G        W   +  ++  ++L + E         +   L  
Sbjct: 287 YGSDVAGVSVTAKEVEGGFVINGVKTWCTFAGYANLLLILCRTEADPSLKHRGLSILLAE 346

Query: 260 RLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGP 308
           +   DG          G    +    IG R   + E+ F + F      L GD     G 
Sbjct: 347 KPSFDGHEFSYKQEGGGSIQGKAIGTIGYRGMHSYEVSFEDYFVPKENLLGGDAGRGKGF 406

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              M+      + +A  +   M+ +L  A+ Y++ R V    + D  + K  IA +A+ +
Sbjct: 407 YFQMEGFAGGRIQTAARANGVMQAALEAALRYSQERKVFAKPIYDYTLTKFKIAKMAMIV 466

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A    +  +A   D+ K + E        A + K +  K+A  V  EAM+  GG GY E
Sbjct: 467 QATRQYTNYVATLLDDHKGQME--------ATLVKLYASKIAEWVTREAMQIHGGMGYAE 518

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           E  ++R++ ++   SI  G+   M L V+
Sbjct: 519 EYPVSRYFVDARVFSIFEGAEEVMALRVV 547


>gi|71279398|ref|YP_267416.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71145138|gb|AAZ25611.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 386

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 20/259 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D+ A+ +  +K+ DG Y ++G K F+S+    D  ++  + +   G   V
Sbjct: 129 IGMTEPGAGSDLKALKTSAKKV-DGGYVINGSKTFISNGQHCDIVVLACKTDPNAGAKGV 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G     T EL F + F     LLG LN  TG +  MK L
Sbjct: 188 SLFIVDADTKGFVKGQKLKKLGIHCQDTSELFFDDMFVPDDALLGPLN--TGFIAMMKEL 245

Query: 316 IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              +  +++V G   +   L   I Y + R+  G  + D    +  +A++A  +      
Sbjct: 246 PR-ERLLLAVGGQAAAEGMLEITIDYVKERNAFGKRIADFQNTRFKLAELATGV------ 298

Query: 373 SFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             R+  +F D+      E     + A + K    ++   V  E ++  GG GY+ E  IA
Sbjct: 299 --RVQKAFVDQCVMLLAENKLDAVTASMAKLHVTELQGKVADECLQFFGGYGYMTEYRIA 356

Query: 432 RHYRESPANSILLGSGNAM 450
           R + ++    I  G+   M
Sbjct: 357 REFVDARVQRIYGGTSEIM 375


>gi|330970202|gb|EGH70268.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 393

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ +++  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARRVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|282891890|ref|ZP_06300369.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498150|gb|EFB40490.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 381

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 30/270 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFIM 245
           A  Q  SV     LTE++ G+D   I ++ +     SD  +     +   +  +S   I+
Sbjct: 110 AIKQGESVPASFALTEEQAGSDPKNIQTRAEVDLNNSDYFWINGSKRLITNGDLSGVLIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
            A+    +  FL+ R    G+P G+   + + K+G  +   V L F         LLG L
Sbjct: 170 FAKTTEGISAFLIER----GTP-GMEVSKTEQKLGLLTANLVGLSFDKCRVHRNQLLGKL 224

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
                  E +KI L  LDS  + V+   + +AEA     +HY++ R   G  + +   + 
Sbjct: 225 G------EGLKIALGSLDSGRIGVAAQAIGIAEASYEAALHYSQVREQFGKKICENQAIA 278

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + ++AA  L         +A  +  +     + A   K +  ++A  + +EAM
Sbjct: 279 FELADMHVKLSAAKLL-------LSKACWQRVQGISYTLAASEAKLYASEIANEIASEAM 331

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI++  + R++R++ A ++  G+
Sbjct: 332 QIFGGYGYIKDYPLERYFRDARATTLYEGT 361


>gi|229033975|ref|ZP_04188928.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228728350|gb|EEL79373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 376

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   PVE++      
Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQ 229

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A 
Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364


>gi|218282346|ref|ZP_03488628.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989]
 gi|218216632|gb|EEC90170.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989]
          Length = 379

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 38/264 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y ++G K F+++   +D +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDGDEYVINGTKIFITNAGEADVYVIFAMTDKTKGTRG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI 314
           +   +LE G+P G  +   + K+G R +AT EL F+N              P E++  K 
Sbjct: 181 ISAFILEKGTP-GFTFGLHEKKLGIRGSATCELIFNNV-----------RIPKENLLGKE 228

Query: 315 LIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +    A+ ++ G R+ +A            EA+ Y ++R   G  +      +  +AD+
Sbjct: 229 GMGFKIAMQTLDGGRIGIAAQALGIAQGAIDEAVAYVKQRKQFGRPIAKFQNTQFQLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                AA  L +  A +  E +  ++ AA A++ A  T       A  +  +A++ +GG 
Sbjct: 289 QTKTDAARWLVYSAATAKQEGRPYTQLAAEAKLFAAET-------AMEITTKAIQLLGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  +  + R +R++    I  G+
Sbjct: 342 GYTRDLPVERMFRDAKITEIYEGT 365


>gi|194741350|ref|XP_001953152.1| GF17623 [Drosophila ananassae]
 gi|190626211|gb|EDV41735.1| GF17623 [Drosophila ananassae]
          Length = 405

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W  ++  ++A I+ A    +     +
Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FLLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP+ L+     G    + ++K+G R ++T +L F +       +LG+      P  
Sbjct: 204 SAFIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCAIPKESMLGE------PGF 252

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD+  + ++G  + + +A     + Y+++R   G  +     +++ IAD++L
Sbjct: 253 GFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYSQKRQAFGKPISKLQSIQQKIADMSL 312

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A  L++R A   D  +  ++EAA A++ A      C         + ++ +GG GY
Sbjct: 313 AMESARLLTWRAAWLKDNKQPYTKEAAMAKLAASEAATMCAH-------QCIQILGGMGY 365

Query: 425 IEERSIARHYRESPANSILLGS 446
           + + +  RHYR++    I  G+
Sbjct: 366 VTDMAAERHYRDARITEIYEGT 387


>gi|83945025|ref|ZP_00957391.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851807|gb|EAP89662.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 393

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 16/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE  GG+D++ I ++ +K  D  + + G K F++  M  ++ ++    G  G   + 
Sbjct: 133 LGMTEPSGGSDLSRIVTKARKDGDD-WVIDGEKTFITGGMKASWYVVGARTGGEGFGGIS 191

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             +      G     + NK+G   + T  L F        + LG   +    + D     
Sbjct: 192 LFVVPADAPGFSRTAITNKMGWWCSDTATLHFDGCRIPERYQLGQEGLCLLAIMDNFNYE 251

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  +   +   +  L +AI YA++R   G  LI    ++  IAD++  I A  A    +
Sbjct: 252 RLTLSAGCLGMAKRCLDDAITYAQQRETFGKPLIKHQAIRHKIADMSGRIDALDAYLQMV 311

Query: 377 ANSFDEAKSR-----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           A   +EA  +     + E A  ++ A  T  +C         EAM+ +GG+GY+   ++ 
Sbjct: 312 AWRVNEATDKGAAMPAAELAKIKVFASKTAEFCAN-------EAMQILGGAGYLRGCAVE 364

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE    +I  GS   M
Sbjct: 365 RIYREVKVMAIGGGSEEIM 383


>gi|99081096|ref|YP_613250.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037376|gb|ABF63988.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 407

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K +DG Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTADG-YRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++     D    GL   +++ K+  R++ T E+      G  +G+       VE +K  
Sbjct: 208 FVL-----DKGTKGLSAPKIQQKMSLRASITGEIVLD---GVEVGE-EALLPHVEGLKGP 258

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA  +A R     RH  G  L +  + +  +A++  +IA  
Sbjct: 259 FGCLNRARYGISWGVMGAAEACWHAARQYGLDRHQFGRPLANTQLFQLKLANMQTEIALG 318

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A  +   A +  GG+G   E  
Sbjct: 319 LQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARHARDMHGGNGISLEFQ 371

Query: 430 IARH 433
           + RH
Sbjct: 372 VIRH 375


>gi|269124543|ref|YP_003297913.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309501|gb|ACY95875.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 610

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 138/298 (46%), Gaps = 48/298 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAIQQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  FLVP+ L      E G  NG+    ++ K+G + + T EL F       G+L+G 
Sbjct: 224 KGLSMFLVPKYLVNLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGEKHPAIGYLVGG 283

Query: 302 LNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGG----------- 347
           ++     ++ M ++I     ++   +++ +      A+ YA++R V GG           
Sbjct: 284 VHEG---IKQMFLIIEYARMMVGTKAIATLSTGYLNALEYAKQR-VQGGDMTQMADKTAP 339

Query: 348 --ILIDQPVMKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAP 398
              +   P ++R++      A  + A   L+    ++   AK    E   A     ++ P
Sbjct: 340 RVTITHHPDVRRSLMTQKAYAEGMRALVMLTATYQDAIQVAKHEGREDKLAEKLNDLLLP 399

Query: 399 ITKYWCCKMAPAVI-AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +  + A A++ +E+++ +GGSG++++  I ++ R+S  +++  G+     +D+ 
Sbjct: 400 VVKGFGSERAYALLGSESLQTLGGSGFLQDYPIEQYIRDSKIDTLYEGTTAIQGMDLF 457


>gi|76801956|ref|YP_326964.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160]
 gi|76557821|emb|CAI49405.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160]
          Length = 379

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 133/292 (45%), Gaps = 45/292 (15%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + ++W PK+ + E   T    M          ++E   G+++A I +  ++  DG Y L+
Sbjct: 105 MKEEWLPKVANGE---TASCSM----------ISEPAHGSNVAGIETVAEEDGDG-YVLN 150

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K W  +  ++D  +++A+     G   +   L +   +G+   ++ NK+G R++   E
Sbjct: 151 GSKMWITNGTVADVGVLMAKTSPGEGHQGITAFLVEMDRDGVTTDKIDNKLGIRASDLAE 210

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVS-----LAE 334
           +        ++ D+ V   P E++         +++ +  S   SV+   V      L  
Sbjct: 211 V--------VVDDVRV---PEENVIGEVDKGFYQLMEFFASGRTSVAAQAVGAAQGALDA 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA +R   G  + +   ++  +A++A  + AA +L++R A   ++        + A 
Sbjct: 260 AIEYADQREQFGQKINEFQAIEHKLAEMATQVEAARSLTYRAATEVEQNNQ-----SVAA 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             + + K +  +MA  V  E ++  GGSGY+ +    R+YR++    I  G+
Sbjct: 315 QFSSMAKLFASEMAVDVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366


>gi|33595280|ref|NP_882923.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565357|emb|CAE36160.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 385

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 150/318 (47%), Gaps = 44/318 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +++ + T++  +A + TP+    + P I   E               + + +TE   G+D
Sbjct: 94  ILTQTDTASPPIAAVGTPQQKARYLPAIVRGE-------------CLVAIAMTEPDVGSD 140

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLE 263
           IA + ++  +  D  + L G K F+++ + +D +++ A+ +        V  FLV    +
Sbjct: 141 IATLRTRAVRDGDE-WVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLV----D 195

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP----VEDMKILI 316
            G+P GL  +R  +K+G +S+ T +L F       G LLG  N         V++ ++++
Sbjct: 196 KGTP-GLRVERRLDKMGWKSSDTAQLSFDGCRVHAGALLGKPNRGFAALMRNVQNERLVL 254

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++ G + ++A+ + Y R R   G  L D+  ++  +A +A  + +A    + +
Sbjct: 255 ----AAQALGGSQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSV 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D   +R  E      M    K  C ++   V+ + ++  G +GY++  ++ R YR+
Sbjct: 311 A-ALD---ARGVECVKEVSM---IKALCGELVNEVMDDCVQFHGATGYMQGTAVERMYRD 363

Query: 437 SPANSILLGSGNAMVLDV 454
           +  ++I  G+   M+ +V
Sbjct: 364 ARVHAIGGGATEIMLEEV 381


>gi|262281483|ref|ZP_06059263.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257071|gb|EEY75809.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 406

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 239 VFVPEENAFPEVRGLRGP------FTCLNSARYGIAWGAMGAAEFCWHTAHRYTMDRKQF 292

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQIALRFGRMKDEGIASVEGTS-------LIKRNNC 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373


>gi|190575228|ref|YP_001973073.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013150|emb|CAQ46782.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Stenotrophomonas maltophilia K279a]
          Length = 596

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 46/295 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTENIVHLVLAKLPDAPPGA 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G     
Sbjct: 226 KGISLFVTPKFKVDREGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354
             P + ++ +   +++A + V    + L+E     A+ Y+R R     +SG    D+P  
Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPAD 339

Query: 355 -------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401
                  ++R +  +   +  +  L+   A   D      +A  R         + PI+K
Sbjct: 340 PILVHPDVRRMLLTVKSLVEGSRLLALHAATLIDIAHHAEDAAERERADTLVSFLTPISK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               +        A++C GG GYI E  + +  R++   ++  G+     LD++ 
Sbjct: 400 ACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454


>gi|126459452|ref|YP_001055730.1| butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548]
 gi|126249173|gb|ABO08264.1| Butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548]
          Length = 410

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254
             +TE   G+D+A I ++ +K+ +  + ++G K F+SS  ++D FI+LA+     + ++ 
Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKVGNK-WVINGRKAFISSSDVADYFIVLARTYPPPDKKLR 190

Query: 255 CF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              L   ++E G+P G   ++  +K+G   N   EL F N     + D N   G  E M 
Sbjct: 191 YLGLTFFIVEKGTP-GFKIEQCYHKMGLHGNHVCELVFENV---EVPDEN-RVGE-EGMG 244

Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            L  +++        A  +V  M+    +A  Y  +R   G  +     ++ ++ ++   
Sbjct: 245 FLYAMETFDRTRIGVAAQAVGMMQGVFEKAFQYVHQRQAFGLPIAAFQAIQFSLVEMMTK 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L++  A   DE  +R E       +A + KY+   +A  VI+EA+   GG G I
Sbjct: 305 IMTARLLTYLAAKLADE--NRKE----FTFVASLAKYYATSVAEEVISEAINLHGGVGVI 358

Query: 426 EERSIARHYRESPANSILLGSGN 448
            E  + R+ R+     I  G+ N
Sbjct: 359 VETGVERYLRDVKITQIYEGANN 381


>gi|311693158|gb|ADP96031.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 591

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 63/363 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL    +  + K +  K+ S E+  T             + LTE + GT
Sbjct: 126 MYPGLTHGAISALYAHGSEELKKTYLEKLISGEWTGT-------------MCLTEPQCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++     DG Y L G K +++    D       ++LA++ G       +  F+V
Sbjct: 173 DLGLIRTRATPNDDGSYALEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVV 232

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           P+ L E G  N      L++K+G + +AT  + F    G+L+G+      P + M+ +  
Sbjct: 233 PKFLPESGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGE------PNDGMRAMFT 286

Query: 318 LDSAIMSVSGMR------VSLAEAIHYARR----RHVSGGILIDQP-------------V 354
           + +    + GM+      ++  E++ +AR     R +SG    D P             +
Sbjct: 287 MMNEARLMVGMQGLGLAEMAYQESLGFARERLQSRSLSGPKNPDGPADPIIVHPDVRRML 346

Query: 355 MKRAIADI---ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           M++ + +    AL + A   L   +A+  +  +  +++    +++ P+ K +        
Sbjct: 347 MRQKVLNEGMRALALFAGHQLDLSVAHPDETVRESADD--LVQLLTPVVKSFLTDEGFNN 404

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
               ++ +GGSG+  +  + +  R+     I  G+     +D++   L  KG  L   LF
Sbjct: 405 ANTGLQVLGGSGFTTDWPLEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRTLF 464

Query: 470 STL 472
            TL
Sbjct: 465 GTL 467


>gi|134097255|ref|YP_001102916.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133909878|emb|CAL99990.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 382

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 25/258 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG-- 254
           G  L+E   G+D AA++++  +  D         W     ++D + ++A+   +G  G  
Sbjct: 125 GYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGGVADFYTLMARTSDDGPRGIS 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           C LV     DG+  GL     ++K+G   + T EL F    G  +    +     + +KI
Sbjct: 185 CLLV-----DGTTPGLSAGTPEHKMGLTGSPTTELRFD---GARVPAERLVGAEGDGLKI 236

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LDS  + ++   V LA+     A+ YA++R   G  +I+   ++  +AD+A  + +
Sbjct: 237 ALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEFQGLEFLLADMAAVVHS 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A       A   D A+ R     +  + A + K      A  V  +A++ +GG GY  + 
Sbjct: 297 AR------ATYLDGARRRDAGMPFG-MQASVAKLVATDAAMKVTTDAVQVLGGVGYTRDF 349

Query: 429 SIARHYRESPANSILLGS 446
              R+ RE+    I  G+
Sbjct: 350 PAERYMREAKVLQIFEGT 367


>gi|326929944|ref|XP_003211113.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Meleagris gallopavo]
          Length = 355

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +  
Sbjct: 97  LSEPGNGSDAGAASTMARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGISA 155

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLVP         GL   + ++K+G R+++T  L F +       LLG L +        
Sbjct: 156 FLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKDNLLGQLGMG------F 204

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+A     + YA +R   G  +     ++  +AD+A+ +
Sbjct: 205 KIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAIQFKLADMAVAL 264

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K  ++EAA A++ A        + A  +  +A++ +GG GY+ 
Sbjct: 265 ESARLLTWRAAMLKDNGKPFTKEAAMAKLAAS-------EAATNIAHQAIQILGGMGYVT 317

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 318 EMPAERHYRDARITEIYEGT 337


>gi|241661733|ref|YP_002980093.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863760|gb|ACS61421.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 384

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 14/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A +T++  +  D  Y ++G K F++S M   +I +A   G  G   + 
Sbjct: 129 LAITEPSGGSDVANLTTRAVRDGDH-YVVNGSKIFITSGMRADYITVAVRTGGAGAGGIS 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL +G   GL    LK K+G   + T +L F +     G LLG  N     V       
Sbjct: 188 VLLVEGDTPGLTRTPLK-KMGWWCSDTAQLHFDDCRVPLGNLLGKENHGFELVMRNFNHE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ +    R  L EA+ +A +R   G  L+   V ++ +  +A  I A  AL   L
Sbjct: 247 RLALAMQAYGLARTCLTEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDL 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                   +   +    +  A  +  +C          A++ +GG G++      R YRE
Sbjct: 307 MRRMQAGDAPLAQLCMLKNFATQSLQFCADT-------AVQLLGGMGFMRGTKAERIYRE 359

Query: 437 SPANSILLGSGNAMVLDVL 455
                 ++G G   VL  L
Sbjct: 360 --VKVYMIGGGAEEVLSDL 376


>gi|126651018|ref|ZP_01723229.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592219|gb|EAZ86268.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 397

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 29/268 (10%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q   V IG  GLTE   G+D+AA+++   +  D  Y ++G K W     ++D FI+ A  
Sbjct: 114 QAKGVRIGAFGLTEPGAGSDVAAMSTTAVRDGDH-YVINGQKTWISLCDIADHFIIFAYT 172

Query: 250 EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +       +  F+V R     S  G   + +K K G R+  T EL F +    +   L V
Sbjct: 173 DKSKRHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFEDLRVPVENRLGV 227

Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                E  KI +  LD+   +V+   V L +A     + Y   R   G  + +  ++ + 
Sbjct: 228 EG---EGFKIAMSALDNGRFTVAAGAVGLIQACLEASVKYCHERETFGKPIGEHQLVGQM 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA++      +  L +R+    ++    + E + A       K+  C  A     +A++ 
Sbjct: 285 IANMEAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQI 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            G  GY +E  +AR+ R S A  I  G+
Sbjct: 338 HGAYGYSDEYPVARYLRNSKAPVIYEGT 365


>gi|299537950|ref|ZP_07051236.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298726532|gb|EFI67121.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 378

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA------QVEGRVG 254
           LTE   G+D  ++ S+  +  D  Y ++G K F+++   +D +I+ A      + +G + 
Sbjct: 124 LTEPSAGSDAGSLQSKAVRDGDD-YVINGSKVFITNGGEADVYIVFASTNPAEKTKG-IS 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F+V    E G+P GL   + ++K+G   + TV+L F N   +   LLG+        E 
Sbjct: 182 AFIV----EKGTP-GLIIGKDEHKMGLHGSRTVQLTFDNCRISADNLLGEEG------EG 230

Query: 312 MKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +  LD   + ++   + +AEA       YA+ R   G  +  Q  +   +AD+A  
Sbjct: 231 FKIAMANLDVGRIGIAAQALGIAEAALEASTAYAKERIQFGKPIAAQQGVGFKLADMATA 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + +A  L +R A+   +  S   EA+ A++       +  + A     EA++  GG GY 
Sbjct: 291 VESAKLLVYRAADLRAKGLSCGAEASMAKL-------FSSRTAVQTAIEAVQIFGGYGYT 343

Query: 426 EERSIARHYRESPANSILLGS 446
           E+  + R++R++    I  G+
Sbjct: 344 EDYPVERYFRDAKVTEIYEGT 364


>gi|93005175|ref|YP_579612.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92392853|gb|ABE74128.1| isovaleryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 395

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/257 (20%), Positives = 117/257 (45%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  DG Y L+G K W  + P +D  ++ A+    +G   +
Sbjct: 128 LAMSETGAGSDVVSMKLKAEE-KDGSYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T E+ F N     +   N+  G  E +K+L+  
Sbjct: 187 TAFIVEKGMEGFGTAQKLDKLGMRGSHTGEMTFKNV---EVPSENILGGLNEGVKVLMSG 243

Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 244 LDYERAVLAAGPIGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + +  + D   +R   A ++R +         WC + A  +  E ++  GG+GY  E  
Sbjct: 304 LYTVGKNLDMLDARG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R++R++    I  G+
Sbjct: 362 LGRYWRDAKLYEIGAGT 378


>gi|255319400|ref|ZP_05360616.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255303536|gb|EET82737.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 600

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 47/324 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K 
Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKI 197

Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+   D       I+LA++ G       +  F+VP+   +     G  N +    +++
Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + F    G+L+G  N     +        + +A+  ++    +   +I 
Sbjct: 258 KMGIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIV 317

Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EA 383
           YA+     R +SG          +I  P ++  +           AL + LA   D  E 
Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEK 377

Query: 384 KSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  EE  ++     ++ PI K +  +       + ++  GG G+I E  + +  R++  
Sbjct: 378 GATEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRI 437

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463
             +  G+     LD+L     GT 
Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461


>gi|295664346|ref|XP_002792725.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226278839|gb|EEH34405.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 439

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 21/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259
           L+E   G+D  A+ ++  K S G Y +SG K W  +S  +  FI+ A ++   G   +  
Sbjct: 180 LSEPASGSDAFALQTKAVKTSSG-YKISGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 238

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
            ++E G+P G    + + K+G R+++T       VE+   N  G        +   + + 
Sbjct: 239 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEISKENLIGVEGQGYKYAINLLNEG 297

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I      +++ G   + A+ I   RR+   G ++ +   M+  +A    +IAAA AL
Sbjct: 298 RIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVAQAYTEIAAARAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    +
Sbjct: 355 VFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEK 407

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            +R+S   +I  G+ N  +  +  LL+K
Sbjct: 408 MFRDSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|224825888|ref|ZP_03698992.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602112|gb|EEG08291.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 386

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 40/313 (12%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219
           M+A    P V + W P++               T   +G   LTE   G+D A++ +  +
Sbjct: 96  MIASFAKPEVAEHWVPQMV--------------TGAKLGSYCLTEPGAGSDAASLKTHAE 141

Query: 220 KISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQR 274
           K  D +Y L+G K F+S   S +  +++A+  G     V  F+VP         G+ Y +
Sbjct: 142 KKGD-VYLLNGSKMFISGAGSTEVLVVMARTGGPGPKGVSAFVVP-----ADAPGIQYGK 195

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329
            + K+G  S  T  + F N       LLG+     G    MK L    ++ A  +V   +
Sbjct: 196 KEKKMGWNSQPTRAVTFDNVEIPAANLLGE--EGQGFTFAMKGLDGGRINIATCAVGTAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +LA A  Y + R   G  L D   ++  +AD+  ++ AA  +    A   D   S S +
Sbjct: 254 AALAAAQRYVQERQQFGHALADFQTVQFKLADMLTELVAARQMVRLAAWKLD---SGSPD 310

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A     MA   K     +A  V  +A++  GG GY+++  + RH R+   + IL G+   
Sbjct: 311 ATAYCAMA---KRLATDLAFNVANQALQLFGGYGYLKDFPLERHVRDLRVHQILEGTNEV 367

Query: 450 MVLDVL-NLLEKG 461
           M + V  +LL+ G
Sbjct: 368 MRMIVARHLLKDG 380


>gi|120401264|ref|YP_951093.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954082|gb|ABM11087.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 611

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 63/342 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F+++  +D        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQADGTWHIDGVKRFITNGDADDLFENILHVVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  FLVP+        E G  NG+    L++K+G +++AT EL F        G+L+
Sbjct: 224 TKGLSLFLVPKFHFDPQTGEPGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
            D +   G  +  K++ Y  +     ++S +      A+ YA+ R V G           
Sbjct: 284 NDTH--NGIAQMFKVIEYARMMVGTKAMSTLSTGYLNALEYAKTR-VQGADMTQMTDKSA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR----IMA 397
               +I  P ++RA+           AL    A   D A +      +AA A     ++ 
Sbjct: 341 PRVTIIHHPDVRRALLIQKAYAEGLRALYLYTAAHQDPAAADIVSGADAAMADRVNDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K    + A   + E+++  GGSG++++  I ++ R++  +S+  G+      D    
Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDF--- 457

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILR---DSISLCKE 496
                      F  + +D G +   V++ LR   D +S  +E
Sbjct: 458 ----------FFRKIARDQGGALLHVVSQLRRFLDDLSAREE 489


>gi|240276621|gb|EER40132.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H143]
 gi|325095334|gb|EGC48644.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 428

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 45/256 (17%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 223

Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            F++ R   D  P G      +KNK   R++ T             G + + + PV +  
Sbjct: 224 GFIIER---DSCPPGTFETPMIKNKTALRASIT-------------GMIQMDSCPVPETN 267

Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357
           +L            L+SA + ++ G   +L + I  AR     R+   G  L    ++++
Sbjct: 268 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLAKYQLVQK 327

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD A D A  T  +  +A   DE KS  E       M  I K   C  A        E
Sbjct: 328 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 380

Query: 418 CIGGSGYIEERSIARH 433
             GG+   +E  I RH
Sbjct: 381 IFGGNAVSDEYHIGRH 396


>gi|85375446|ref|YP_459508.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis
           HTCC2594]
 gi|84788529|gb|ABC64711.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis
           HTCC2594]
          Length = 569

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 160/379 (42%), Gaps = 70/379 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLS 229
           + PK+ S E+  T             + LTE + G+D+ A+ S    I++G     Y + 
Sbjct: 138 YLPKLVSGEWSGT-------------MNLTEPQAGSDVGALRSTAVPITEGEHAGKYRVR 184

Query: 230 GHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLVPR--LLED---GSPNGLCYQ 273
           G K +++     ++   I L         EG  G   FLVP+  + +D   G  N L   
Sbjct: 185 GQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRNDLRPV 244

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            L++K+G  ++ T  + + +     G L+G  N        + +   +++A ++V    V
Sbjct: 245 SLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGL-----VAMFTMMNNARINVGNQGV 299

Query: 331 SLAE-----AIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRL 376
            + E     A+HYAR R  S            +++ P ++R +  +      A AL +  
Sbjct: 300 QIGERATQQALHYARDRIQSARAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYT 359

Query: 377 ANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A   D   +  +EAA AR  I+ P+ K W   +   + +  ++  GG G++EE   A+HY
Sbjct: 360 AGQVDRG-TIGDEAAKARGEILTPMIKAWGTDIGIEIASIGVQVHGGMGFVEETGAAQHY 418

Query: 435 RESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           R++    I  G+      D++     LE G  L   L   + +D     K          
Sbjct: 419 RDARIAPIYEGTNGIQAADLVTRKLGLEDGQALI-GLLEDIARDAADEPKL--------F 469

Query: 492 SLCKEDKGLARFLTEKIAL 510
           +L  +   +AR++ E+ +L
Sbjct: 470 ALAGDCAAIARWMREEASL 488


>gi|189485601|ref|YP_001956542.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287560|dbj|BAG14081.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 389

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 29/275 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG---- 254
            GLTE   G+D   + +   K  D  Y L+G K F+++   ++ + + A+     G    
Sbjct: 124 FGLTEAGAGSDATGMATVAVKDGD-YYVLNGTKCFITNGGDAEIYTIFAKTNPDRGARGI 182

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF+V    E G+P G  + + + K+G R+++T EL F +    +  D  +       + 
Sbjct: 183 SCFIV----EKGTP-GFEFGKKEKKMGIRASSTRELIFDDCR--VHKDQLIGKEGHGLLT 235

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LD++   V+   + +AE     A+ YAR+R   G  +     ++  +A++A ++ A
Sbjct: 236 AQATLDNSRPGVAAQALGIAEGALDEAVEYARKRVQFGQPIASFQAIQHLLAEMATEVEA 295

Query: 369 ATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A AL +  A   D    K  S+E+A A++       +C ++A  V   A++  GG GY  
Sbjct: 296 ARALLYASARMIDSGTGKRTSKESAMAKL-------FCSEVAMRVTTNAVQIFGGYGYTR 348

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV-LNLLEK 460
           E  + +  R++   ++  G+      ++ LNL+++
Sbjct: 349 EYPVEKMMRDAKITTLYEGTSQIQKNEIALNLIKE 383


>gi|148381147|ref|YP_001255688.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|153932219|ref|YP_001385522.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397]
 gi|153936132|ref|YP_001388928.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall]
 gi|148290631|emb|CAL84760.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|152928263|gb|ABS33763.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397]
 gi|152932046|gb|ABS37545.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall]
          Length = 379

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 26/270 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   +LE G P G    + ++K+G R+++T EL F +       LLG      G    MK
Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKQNLLGKEGKGFGIA--MK 237

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L   D   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + A
Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A      K+ + +AA A++ A  T  +       V  ++++ +GG GY ++ 
Sbjct: 295 AKYLVYKSAWKKSAGKNYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + + N L
Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377


>gi|91084343|ref|XP_972925.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum]
          Length = 401

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A ++  +   D  + L+G K W  +   S+A ++LA  +  +    +
Sbjct: 141 FALSEPGNGSDAGAASTTARLDGDQ-WMLNGTKAWITNGFESEAAVVLATTDKSLKHKGI 199

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
             ++      GL   + ++K+G R ++T  L F +     +   N+   P +  KI ++ 
Sbjct: 200 SAIIVPKPTKGLELGKKEDKLGIRGSSTCSLIFEDC---QVPKANLLGEPGQGFKIAMMT 256

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++   + +A+A       YA +R   G  L+    ++  +A++AL + AA  L
Sbjct: 257 LDAGRIGIASQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLDAARLL 316

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D  K+ ++EAA A++ A        + A  +  + ++ +GG GY+ +    R
Sbjct: 317 TWRAAWLKDNHKNFTKEAAMAKLAA-------SEAATYLSHQCIQILGGMGYVSDMPAER 369

Query: 433 HYRESPANSILLGS 446
           HYR++    I  G+
Sbjct: 370 HYRDARITEIYEGT 383


>gi|256393573|ref|YP_003115137.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359799|gb|ACU73296.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 387

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 16/261 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A I +  ++  DG  + ++G K F++S +   +++ A   G  G   +
Sbjct: 129 LAVTEPGGGSDVARIQTTARR--DGEHFVVNGAKTFITSGVRADYVVAAVRTGDSGASGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R   K+G   + T EL F +       L+G  N     + +  + 
Sbjct: 187 SLLVVEKDTPGFTVSRRLEKLGWLCSDTAELAFQDARVPVENLVGAENSGFFQLAEHFLS 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L  A+ + R+R   G  LID+ +++  + ++A  I  A   +  
Sbjct: 247 ERVALAAQAYSHAQRCLDLAVDWTRKRQTFGKPLIDRQLVQNTLTEMARKIDVARTYTHA 306

Query: 376 LAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           L + S    K    E  +A+  A  T  W       V  +A++  GG GY+ E  + RHY
Sbjct: 307 LIDRSLAGEKDLIAEVCFAKNTAVETAEW-------VATQALQLFGGLGYMRESEVERHY 359

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R+     + +G G   V++ L
Sbjct: 360 RD--VRILGIGGGATEVMNGL 378


>gi|299537951|ref|ZP_07051237.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298726533|gb|EFI67122.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 378

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 27/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTYIVFAV 171

Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              + +     F+V    E     G    + + K+G RS+ T E+ F N     +   N+
Sbjct: 172 TDPEAKHGTSAFIVEAGFE-----GFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENL 223

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
                E  KI +  LD     ++   V +A+     A+ YA+ R   G  L     +   
Sbjct: 224 LGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPLTANQGISFK 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I A+  L+++ A          + +A A++MA  T       A +V  EA++ 
Sbjct: 284 LADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAGDT-------AMSVTTEAVQV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378


>gi|91781760|ref|YP_556966.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685714|gb|ABE28914.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 387

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 53/307 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A +V    TP     + PK  + E+               G+GLTE   GTD+ AI +  
Sbjct: 97  AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271
           +++ D  Y ++G+K W  +S   +   +L + +        PR      LL    P G  
Sbjct: 144 KRVGDE-YVVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHRGMSLLLVQKGP-GFE 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324
             R   K+G +   T EL F+          +VST    G VE     +IL  L+   ++
Sbjct: 198 VSRQLEKLGYKGIDTCELSFNG--------YHVSTDALIGGVEGKGLQQILGGLELGRIN 249

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V +A     E++ Y+++R   G  + +   ++  + ++A  + A   L    A  
Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQK 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D  +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P 
Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPL 362

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 363 LTIGEGT 369


>gi|115350748|ref|YP_772587.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115280736|gb|ABI86253.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 395

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D   + ++ +K+  G Y +SG K W  +
Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSVSGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               LL +++   GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|225025846|ref|ZP_03715038.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353]
 gi|224956831|gb|EEG38040.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353]
          Length = 386

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 29/272 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD   +  Q + + DG  + L+G K F+++   +D +I++A
Sbjct: 115 PLAKGEKLGAFGLTEPGAGTDAQGV--QTKAVLDGDEWVLNGSKCFITNGSYADYYIIIA 172

Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                    GR        ++E G+P G  +   + K+G R +AT EL F +     +  
Sbjct: 173 ITSVDTDARGRKKKKFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDC---RIPK 228

Query: 302 LNVSTGPV-EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
            N+  GP+ +   I ++ LD   + ++   + +AE      I Y + R   G  +  Q  
Sbjct: 229 ENL-LGPMGKGFAIAMHTLDGGRIGIAAQALGIAEGALDATIAYVKERKQFGRAIAAQQN 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A++A  + AA  L ++ A +    +  S EAA A++ A  T       A  V  +
Sbjct: 288 TQFQLANMATQVEAAKLLVYKAAMAKATQRVYSVEAAKAKLFAAET-------AMDVTTK 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++ +GG GYI E  + R  R++    I  G+
Sbjct: 341 CVQLLGGYGYIREYDVERMMRDAKITEIYEGT 372


>gi|218673125|ref|ZP_03522794.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 395

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 24/265 (9%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           + F  E       P   +   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W 
Sbjct: 114 ETFGSEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWI 172

Query: 235 LSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            ++P++D F++ A+ E G +  F    +LE G   GL    +  K+G R++ T E+    
Sbjct: 173 SNAPIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEMVMDA 227

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
            F   + + N+  G          L+SA   ++   +  AE     A  Y   R   G  
Sbjct: 228 VF---VPEENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRP 284

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+A +I+       RL    +E     E       +  I K   C  A
Sbjct: 285 LAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKA 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   + + +GG+G  +E  IARH
Sbjct: 338 LDIARASRDMLGGNGISDEFGIARH 362


>gi|157962602|ref|YP_001502636.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157847602|gb|ABV88101.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 385

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G  G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAIREGDE-YVISGSKVFISGAGATELLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           +      G+ Y + ++K+G  +  T E+ F N      +LLG+     G    MK L   
Sbjct: 183 VVPADAAGVIYGKAEDKMGWNAQPTREITFENVRVPVSYLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  S+   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  L  RL
Sbjct: 241 RINIATCSIGTAQAALERATKYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F   +   E  AY      + K +   +   V   A++  GG GYI E  + R+ R+
Sbjct: 300 A-AFKLDQQDPEATAY----CAMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERYVRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|313126840|ref|YP_004037110.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312293205|gb|ADQ67665.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 387

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 34/269 (12%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           T   IG   L+E   G+D+ A+ +   K  D  Y ++G K W  +  ++D   + A+ + 
Sbjct: 121 TGEDIGAFALSEAGAGSDVPAMDTTATK-DDDEYVINGGKLWISNGSVADTVTVFAKTDP 179

Query: 252 RVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             G       V R  ED   +G   +  ++K+G++   T EL F         LLG+   
Sbjct: 180 DAGNKGISSFVVRPEED---DGFIVEGTEDKLGDKGCPTAELRFDEMRIPEDRLLGE--E 234

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357
             G V+ +K L    +  A  S+   R +L +A+ YA  R        DQP+     +K 
Sbjct: 235 GEGFVQALKTLNGGRITIAARSIGIARAALDDAVAYADDRE-----QFDQPIAEFQAIKH 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   + AA  L  + A+     +S  +EAA A++       +  +++  V  E ++
Sbjct: 290 KLADMDTKVQAAKMLMHKAADLKIRGESYIKEAAQAKL-------YASEISREVANEGIQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY ++    R+YR++  N I  G+
Sbjct: 343 IHGGYGYTKDFPAERYYRDAKLNEIYEGT 371


>gi|304311346|ref|YP_003810944.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium
           HdN1]
 gi|301797079|emb|CBL45292.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium
           HdN1]
          Length = 389

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 32/289 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCL 228
           + + W PK+ S E            +VA  + +TE   G+D+ A+ +    I+DG  Y +
Sbjct: 117 LKRHWLPKMASGE------------AVA-AIAMTEPGTGSDLQAVRTTA--IADGDDYVI 161

Query: 229 SGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++  +SD  +++A+   G      +  ++ + S  G    +   K+G R   T
Sbjct: 162 NGSKIFITNGYLSDVVVVVAKTGSGEKAAQNISLIVVEASRAGFTKGKPLKKVGMRGQDT 221

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
            EL F N       LLG   +  G +  MK L +  +  AI+  +G    LA  + Y ++
Sbjct: 222 CELFFDNVRVPKTNLLGMEGM--GFIMLMKELAWERMMIAIICAAGAEAVLANTVDYVKQ 279

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  +I  A     R      ++K   E AA A       K
Sbjct: 280 RKAFGKPISAFQNTRFKLAEMRAEIQIARVYVDRCLELVLQSKLSVEAAASA-------K 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           YW   +   V+ E ++  GG GY+ E  +AR Y ++ AN I  G+   M
Sbjct: 333 YWVSDLLSKVVDECVQLHGGYGYMLEYPVARAYIDTRANRIYGGTNEIM 381


>gi|301168549|emb|CBW28139.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 382

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           LTE   G+D A + +  ++  D  Y ++G K W  ++  +D F++    +       + C
Sbjct: 125 LTEPGNGSDAAGLKTTIKEDGDH-YIINGQKMWITNAGYADLFVIYCTTDPELKHKGISC 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308
            +    L+D +  GL     + K+G+RS+ T  + F+N         G L    N++   
Sbjct: 184 IV----LDDKNVEGLEIGAKEKKMGHRSSDTRAVTFTNVRIPKENLIGNLGDGWNLAKMT 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  + ++    A  +V G + +L  A+ YA+ R      L     ++  +AD+A+ + A
Sbjct: 240 LDHSRPMV----AASAVGGAQCALDHAVKYAKERIQFNKPLAGHQAIQMMVADMAMKVEA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L  + A   D+ KS +E A+YA+  A   K+        V  +A++  GG GY  E 
Sbjct: 296 SRLLVHKAAWLLDQGKSNTELASYAKAFAA-DKFM------EVATDAVQVFGGYGYSNEY 348

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 349 PVEKIMRDAKLIQIYEGT 366


>gi|262380864|ref|ZP_06074015.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|262297499|gb|EEY85417.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 600

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 47/324 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K 
Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKI 197

Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+   D       I+LA++ G       +  F+VP+   +     G  N +    +++
Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + F    G+L+G  N     +        + +A+  ++    +   +I 
Sbjct: 258 KMGIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIV 317

Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EA 383
           YA+     R +SG          +I  P ++  +           AL + LA   D  E 
Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEK 377

Query: 384 KSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  EE  ++     ++ PI K +  +       + ++  GG G+I E  + +  R++  
Sbjct: 378 GATEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRI 437

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463
             +  G+     LD+L     GT 
Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461


>gi|296138435|ref|YP_003645678.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026569|gb|ADG77339.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 606

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 52/331 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + L+E   G+ +A IT++ ++  DG Y ++G K +++     M++  +  
Sbjct: 159 PMMEGRFTGTMCLSEPEAGSALADITARAERREDGTYAITGTKMWITGGDHEMTENIVHL 218

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA+V G       +  F+VP+ L +     G  N +    L +K+GN+      L F +
Sbjct: 219 VLAKVPGSPDGVKGISLFIVPKYLVNDDTSVGERNDVTLVGLNHKMGNKGTTNCLLAFGD 278

Query: 294 ---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
                      G+L+G  N        +++   ++ A ++V     S+A     +++ YA
Sbjct: 279 GTHPQPGGGATGYLVGTENRGL-----IQMFQMMNEARIAVGYTASSIAYTAYLQSLEYA 333

Query: 340 RRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           R R     +         +I+   ++R +           AL+   A   DEA + ++EA
Sbjct: 334 RSRVQGRPVTALDGPQVPIIEHADVRRMLLAQKSFAEGGLALTLYAARLIDEANTAADEA 393

Query: 391 A------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                  +   + PI K W  +        A++  GG GY  + ++ + YR++  N+I  
Sbjct: 394 GKVAAEQFLDFLTPIIKSWPSEFGLKANEYAIQIHGGYGYTRDYNVEQLYRDNRLNAIHE 453

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
           G+     LD+L   + + G   F  L   +E
Sbjct: 454 GAKAIHGLDLLGRKVPQHGGASFGALLGRIE 484


>gi|152985760|ref|YP_001349152.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960918|gb|ABR82943.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 382

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 17/261 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + L +TE  GG+D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   
Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFGG 183

Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           V  LL E G+P G    R   K+G  ++ T EL F +       L+G  N     +    
Sbjct: 184 VSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANF 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A+M+    +++L E++ +AR R   G  +    V++  +A++A  +  +   +
Sbjct: 243 QSERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFT 302

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A      KS  +E + A       K +   +A  +  +A++ +GG GY+ E  + R 
Sbjct: 303 YRQAAKMSAGKSVIKEISMA-------KNFATDVADRLTYDAVQMLGGMGYMRESLVERL 355

Query: 434 YRESPANSIL-LGSGNAMVLD 453
           YR+   N IL +G G+  +++
Sbjct: 356 YRD---NRILTIGGGSREIMN 373


>gi|86131806|ref|ZP_01050403.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817628|gb|EAQ38802.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 394

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 125/258 (48%), Gaps = 17/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  ++ A+    +G   +
Sbjct: 125 LCITEPFGGSDVAGMRTTAVKEGDH-YIINGSKTFITNGVYSDYLVVAAKTAPELGGKGM 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L D    G+   +L +K+G R++ T E+ F N       L+G+ N   G +      
Sbjct: 184 SIFLLDRDMPGINATKL-DKLGWRASDTGEISFDNVKVPAENLMGEENAGFGYIMQHFAS 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSF 374
             L   I + +    ++  A+ Y + R  + G+ ID+   ++  +A+   ++  + A ++
Sbjct: 243 ERLIMGINAHARAEYAIEYALGYMKER-TAFGVTIDKFQALRHKLAERTAEVEMSKAFNY 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A+     +   +EA  +++ A        K+A  VI + ++ +GG GY+EE  +AR  
Sbjct: 302 TVAHRLGNGEYVVKEATMSKLTA-------TKIADEVIYDCLQMLGGYGYMEEYPLARML 354

Query: 435 RESPANSILLGSGNAMVL 452
           R+S    I  G G + +L
Sbjct: 355 RDSRLGPI--GGGTSEIL 370


>gi|225556405|gb|EEH04694.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 483

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 45/256 (17%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 219 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 278

Query: 255 CFLVPRLLEDGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            F++ R   D  P G      +KNK   R++ T             G + + + PV +  
Sbjct: 279 GFIIER---DSCPPGTFETPVIKNKTALRASIT-------------GMIQMDSCPVPETN 322

Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357
           +L            L+SA + ++ G   +L + I  AR     R+   G  L    ++++
Sbjct: 323 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLAKYQLVQK 382

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD A D A  T  +  +A   DE KS  E       M  I K   C  A        E
Sbjct: 383 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 435

Query: 418 CIGGSGYIEERSIARH 433
             GG+   +E  I RH
Sbjct: 436 IFGGNAVGDEYHIGRH 451


>gi|148548730|ref|YP_001268832.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512788|gb|ABQ79648.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 375

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 170 TDPEAGKRGISAFIVPT----DSP-GYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLG 224

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 E  KI L  L+   + ++   V +A A       YA  R   G  LI+   +  
Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  ++ A  +    A   D  +        A + A + K +  +MA  V ++A++
Sbjct: 282 RLADMATKVSVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+ +  + R YR+     I  G+ +
Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|326319047|ref|YP_004236719.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375883|gb|ADX48152.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 395

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 131 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F N       +LG +N         K+L
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPVSQVLGQVNGGA------KVL 243

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  E     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 304 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRLWRDAKLYEIGAGT 378


>gi|221201024|ref|ZP_03574064.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
           CGD2M]
 gi|221206524|ref|ZP_03579537.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221173833|gb|EEE06267.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221178874|gb|EEE11281.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
           CGD2M]
          Length = 395

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +++      +   +LE G   GL    +  K+G R++ T E+     F     L+ +++ 
Sbjct: 184 KLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  +  R++V      G  L    ++++ +
Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  A  +   A + +
Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 350 GGNGISDEFGVARH 363


>gi|117921210|ref|YP_870402.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613542|gb|ABK48996.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 385

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++    G+ G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L   
Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|94500787|ref|ZP_01307316.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94427109|gb|EAT12090.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 596

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 75/461 (16%)

Query: 69  TAQELAR--MANYNT------PQLHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSI 119
           TAQ +A    AN+N+      PQ       GE+   + E   AW       + +  H   
Sbjct: 43  TAQRIAEDYFANHNSKADEHEPQFD-----GEKVSTIPEVKEAWKHFSESGLLNARH--- 94

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPK 177
              S++    +    I +A   L      G    P +TSA+  ++    +      + P 
Sbjct: 95  ---SYDDGGMQLPALINSACCGLFTSANPGTAGYPFLTSAAANVIQAFGSDEQKAKYLPG 151

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +F+  +  T             + LTE   G+ +  +T++     DG Y L G K ++S 
Sbjct: 152 MFNGRFSGT-------------MALTEPDVGSSLGDLTTKAIPQEDGSYKLKGQKMYISG 198

Query: 238 PMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGN 281
              D       ++LA+VEG       +  F+ P+ L  +DGS    N +    L +K+G 
Sbjct: 199 GDQDITENIVHLVLARVEGANKGVKGISLFITPKFLVNDDGSLAERNDVKLAGLLHKMGY 258

Query: 282 RSNATVELEFS---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAE 334
           R   +  L F    N  G+L+G+     G +  M    +I + L +A++   G   SL  
Sbjct: 259 RGTTSTVLSFGEEDNCTGYLIGEEGKGLGYMFKMMNEARIGVGLGAAMIGYRGYLESLDY 318

Query: 335 AIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKS 385
           A +  + R  S          +++   +KR +      +  + AL    +   DE  A  
Sbjct: 319 AKNRPQGRKPSSKDSSSKPLNIVEHADVKRMLLAQKSYVEGSLALCLFASRLVDEHEAGG 378

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++      ++ PI K +           A++ +GG+GYI E  + + YR++  N I  G
Sbjct: 379 HADSGILLDLLTPIVKSFPSSYGLKANDYAIQVLGGAGYIREYPVEQCYRDNRLNPIHEG 438

Query: 446 SGNAMVLDVL--NLLEKGTN----LFEQLFSTLEQ--DLGS 478
           +     LD+L   L  K +     L E++ +TL+Q  DL S
Sbjct: 439 TYGIQSLDLLGRKLWMKNSQGLQLLMERVQNTLKQAKDLAS 479


>gi|21220196|ref|NP_625975.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|5441775|emb|CAB46799.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 383

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 59/309 (19%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A        + W P + S EY              +G  GLTE   G+D   +T++
Sbjct: 95  AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y ++G K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPT-----DTPGLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322
            + +  K+G R  AT EL        +L D+ V   P   M           +  L    
Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243

Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           MSV+   V +A+A     + YA  R   G  +    +++  I+DIALD+ AA  L++R+A
Sbjct: 244 MSVAAGCVGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D  +  + E++ A++ A        + A      A++  G  GYI+E    +  R++
Sbjct: 304 DLIDRGQPFAVESSKAKLFA-------SEAAVRAANNALQVFGAYGYIDEYPAGKLLRDA 356

Query: 438 PANSILLGS 446
              ++  G+
Sbjct: 357 RVMTLYEGT 365


>gi|325920897|ref|ZP_08182792.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325548649|gb|EGD19608.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 387

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 43/311 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + + PK+ + E+              +G L ++E   G+D+ ++  +     D  
Sbjct: 108 TPEQKQRYLPKLCTGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           + L+G+K W  + P +D  ++ A+ +   G   +   ++E G P     Q+L +K+G R 
Sbjct: 153 FVLNGNKMWITNGPDADVLVVYAKTDPAAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 211

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL F+       N  G L G + V    ++  ++++      +  + M V L    
Sbjct: 212 SNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+ + + A  A  + +A + D  ++  ++AA A + 
Sbjct: 269 -YVHERKQFGEPIGTFQLMQAKLADMYVGLNACRAYVYAVARACDAGQTTRQDAAGAILY 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A     W       +  +A++ +GG+GYI +    R +R++    I  G+G + +  +L 
Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377

Query: 457 LLEKGTNLFEQ 467
               G  LFE+
Sbjct: 378 ---IGRELFER 385


>gi|184156982|ref|YP_001845321.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183208576|gb|ACC55974.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322506879|gb|ADX02333.1| Glutaryl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323516749|gb|ADX91130.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 403

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 177

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370


>gi|103487014|ref|YP_616575.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977091|gb|ABF53242.1| isovaleryl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
          Length = 389

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 123/256 (48%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K+  G Y L+G K W  ++  +D  ++ A+     G   +
Sbjct: 130 LAMSEAGAGSDVVSMKLKADKVQGG-YVLNGTKFWITNASHADTLVVYAKTSPDAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F++   +   ++G  N   G      ++
Sbjct: 189 TAFLIEKDMPGFSIGQKIDKVGMRGSPTAELVFTDCEVSEEQVMGPENGGVGV-----LM 243

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++G+++ + +A     I Y R R   G  +    +M+  +AD+ + + +A 
Sbjct: 244 SGLDYERVVLAGLQLGIMQACLDTVIPYVRERKQFGKPIGAFQLMQAKVADMYVMLQSAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  ++   +AA A ++A        + A  V  EA++ +GG+GY ++  +
Sbjct: 304 SYVYNVAKACDAGQTTRFDAAGAILLA-------SESAVKVAGEAIQALGGAGYTKDWPV 356

Query: 431 ARHYRESPANSILLGS 446
            R++R++    I  G+
Sbjct: 357 ERYWRDAKLLDIGAGT 372


>gi|161525739|ref|YP_001580751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189349539|ref|YP_001945167.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|221214378|ref|ZP_03587349.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|160343168|gb|ABX16254.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189333561|dbj|BAG42631.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|221165635|gb|EED98110.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 395

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +++      +   +LE G   GL    +  K+G R++ T E+     F     L+ +++ 
Sbjct: 184 KLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  +  R++V      G  L    ++++ +
Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  A  +   A + +
Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 350 GGNGISDEFGVARH 363


>gi|328950047|ref|YP_004367382.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328450371|gb|AEB11272.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 381

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++  + +++ DG Y L+G K W  S   +  ++++A+  G     +   
Sbjct: 124 LTEPHAGSDPASLKLRAERV-DGGYVLNGVKSWITSGGQAQLYVVMARTGGEGARGITAF 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI--- 314
           L+E  +P GL + + + K+G  +  T E+ F   F      LG+        E M +   
Sbjct: 183 LVEKDTP-GLSFGKPEEKMGLHAAHTTEVRFDEVFVPEENRLGE--------EGMGLKYA 233

Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDS  + ++   V +A A +     YA  R   G  L     +   +AD+A  I AA
Sbjct: 234 LSGLDSGRIGIAAQAVGIARAAYEIARDYADERTQFGQKLRAFEGVSFKLADMATRIEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D     S+EA+ A++ A        + A  V  +A++ +GG GY  E  
Sbjct: 294 RLLLLNAAARKDRGLPFSKEASMAKLFA-------SETAVEVTRQAVQILGGYGYAREYR 346

Query: 430 IARHYRESPANSILLGS 446
           + R+YR++    I  G+
Sbjct: 347 VERYYRDAKITEIYEGT 363


>gi|299067684|emb|CBJ38893.1| dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 397

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 20/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ ++ +K+ DG Y LSG K W  +
Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLSGTKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP+++ F++ A++    G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIANVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPVIHGKVGLRTSITGEIVLDEVF- 232

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-- 353
             + + N+  G V  +K     L+SA   ++   +  AE+  +  R++V       +P  
Sbjct: 233 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLA 289

Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +I        RL    D+  +  E       +  I K   C  A  
Sbjct: 290 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDDGTAAVE-------ITSIMKRNSCGKALD 342

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A + +GG+G  +E  + RH
Sbjct: 343 IARMARDMLGGNGISDEFGVIRH 365


>gi|299753045|ref|XP_001833025.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
 gi|298410118|gb|EAU88714.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
          Length = 438

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 20/263 (7%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           + V +G L ++E   G+D+ ++  +  K+  G Y L+G+K W  + P++   ++ A+   
Sbjct: 168 SGVKVGSLAMSETGSGSDVVSMKLRADKVKGG-YKLNGNKFWITNGPVASTLVVYAKTSP 226

Query: 252 RVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             G   +   ++E G P     Q+L +K G R + T EL F +     +   NV  G V+
Sbjct: 227 DKGSKGITAFIVEKGMPGFSTSQKL-DKFGMRGSDTCELVFEDCVVPEVVAENV-LGQVD 284

Query: 311 DMKILIY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               ++   LD   + +SG     M+ +   A+ Y   R   G  +    +M+  IAD+ 
Sbjct: 285 RGAAVLMSGLDLERIVLSGGPLGLMQAAFDYAVEYVHDRKQFGQPVGTFQLMQAKIADMY 344

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             ++A+ A  + +A + D+ +   ++ A A +       +  + A  V  E M+C+GG+G
Sbjct: 345 TKLSASRAYVYAVARACDQGRISRKDCAGAIL-------YSTEKAVEVTLEGMQCLGGNG 397

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI +    R  R++   ++  G+
Sbjct: 398 YINDYPTGRLVRDARLYTVGAGT 420


>gi|284048908|ref|YP_003399247.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953129|gb|ADB47932.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 635

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D A  T    +     + L+G+K F+++   +D +++ A  E G+    +
Sbjct: 123 FGLTEPNAGSD-AGETETTAEFDGTHWILNGNKIFITNAGKADTYVVFAVTEPGKGTRGI 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
              ++E G P G  +    +K+G RS+AT EL F+N     L   N+     +  KI + 
Sbjct: 182 SAFIVEKGMP-GFTFGDHYDKLGIRSSATAELIFNNV---KLPKENLLGKRGQGFKIAMA 237

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAATA 371
            LD   + ++   + +A+  + A   +    I  + P+ +       +AD+A  + AA  
Sbjct: 238 TLDGGRIGIAAQALGIAQGAYEAALNYSKERIQFNAPICQNQGVSFKLADMATKLRAARF 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A    E +    E+A A++       +    A ++  +A++  GG+GY++   + 
Sbjct: 298 LVYSAAELKQEHQDYGMESAMAKM-------YASDAAVSITNDALQIFGGTGYLKGMDVE 350

Query: 432 RHYRESPANSILLGS 446
           R YR++   +I  G+
Sbjct: 351 RFYRDAKITTIYEGT 365


>gi|332875821|ref|ZP_08443616.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332736001|gb|EGJ67033.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 406

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373


>gi|222833226|gb|EEE71703.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 51/309 (16%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A +      + W PK+ S E               + +G+TE   G+D+ A+ +  
Sbjct: 84  APYIARIANEEQKQRWLPKVCSGE-------------AILAIGMTEPGTGSDLKAVRTTA 130

Query: 219 QKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             I DG  Y ++G K F+S+ ++ D  IM+ + +   G   V  ++ +    G    R  
Sbjct: 131 --IRDGDEYVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSLIMVEADREGFRRGRKL 188

Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            K+G  +  T EL F N               F +L+G+L     P E + I      A+
Sbjct: 189 EKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGEL-----PQERLSI------AV 237

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI-ALDIAAATALSFRLANSFD 381
            + + +   L   I Y + R      + D    K  +ADI A  +A    + + L+    
Sbjct: 238 SAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYLSEHIR 297

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S  E        A I K +  +     + E ++  GG GY+ E  +AR + +S    
Sbjct: 298 RRLSLEE--------AAIAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADSRVTR 349

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 350 IYGGTSEVM 358


>gi|254523722|ref|ZP_05135777.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219721313|gb|EED39838.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 596

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 46/295 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPAGA 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G     
Sbjct: 226 KGISLFVTPKFKVDRDGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354
             P + ++ +   +++A + V    + L+E     A+ Y+R R     +SG    D+P  
Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPAD 339

Query: 355 -------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401
                  ++R +  +   +  +  L+   A   D      +A  R         + PI+K
Sbjct: 340 PILVHPDVRRMLLTVKSLVEGSRLLALHAATLIDVAHHAEDAAERERADTLVSFLTPISK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               +        A++C GG GYI E  + +  R++   ++  G+     LD++ 
Sbjct: 400 ACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454


>gi|222111004|ref|YP_002553268.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221730448|gb|ACM33268.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 388

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 30/263 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254
           LTE   G+D A+I ++ + + +  Y ++G K F+S   S D  +++A+        G + 
Sbjct: 124 LTEPGAGSDAASIKTRAELVGN-EYVINGSKAFISGAGSTDVLVLMARTGDAQSGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307
            F VP  L      G+ Y + + K+G  S  T ++ F N       LLG       ++  
Sbjct: 183 AFAVPANLP-----GIHYGKKEEKMGWNSQPTRQISFDNVRIPANHLLGQEGEGFKIAMK 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  SV   + +L  A  Y + R   G  +     ++  +AD+A ++ 
Sbjct: 238 GLDGGRINI----ATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELV 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA S  +A +R      A     + K +   +   V+ EA++  GG GYI E
Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDVGFTVVNEALQLHGGYGYIRE 347

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + R  R++  + IL G+   M
Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370


>gi|52082251|ref|YP_081042.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52787643|ref|YP_093472.1| AcdA [Bacillus licheniformis ATCC 14580]
 gi|52005462|gb|AAU25404.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52350145|gb|AAU42779.1| AcdA [Bacillus licheniformis ATCC 14580]
          Length = 379

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 28/283 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247
           PM +       GLTE   G+D   + +  +K  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMARGEKIGAYGLTEPGSGSDAGGMKTTAEKKGD-EYILNGTKIFITNGGIADFYIVFAN 171

Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               Q       F+V +        G    + + K+G RS+ T E+ F +    L   L 
Sbjct: 172 LAPEQKHKGTTAFIVEKDF-----PGFSVGKKERKLGIRSSPTTEIIFQDCRVPLKNRLG 226

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
              G  E  KI +  LD     ++   V +A+     A  YA+ R   G  + +Q  +  
Sbjct: 227 ---GEGEGFKIAMKTLDGGRNGIAAQAVGIAQGAFEAAKAYAKERKQFGRPIAEQQGIAF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A +I A+  L+++ A         SE   Y +  A ++K +    A  V  EA++
Sbjct: 284 KLADMATEIEASRLLTYQAAWL------ESEGLPYGKASA-MSKLYAGDTAMKVTTEAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 337 IFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQKLVISRMLMK 379


>gi|169826482|ref|YP_001696640.1| acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           sphaericus C3-41]
 gi|168990970|gb|ACA38510.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           sphaericus C3-41]
          Length = 390

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 23/257 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K       GLTE   G+D A  T     I    Y ++G K ++++      I++  V
Sbjct: 123 PLAKGETLGSFGLTEPNAGSD-AGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAV 181

Query: 250 EGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
            G+   G  ++  ++   +  G+      +K+G R + T E+   N       LLGD   
Sbjct: 182 TGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRSNLLGDEKR 241

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                   + L  LD   +S++ + V +A+A     + +A+ R   G  +     ++  +
Sbjct: 242 GFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A++I  A  L  + A   D+ K   +EAA A++ A    +  C        +A++  
Sbjct: 297 ADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQIH 349

Query: 420 GGSGYIEERSIARHYRE 436
           GGSGY++E  + RH R+
Sbjct: 350 GGSGYMKEYDVERHLRD 366


>gi|5869965|emb|CAB55554.1| Isovaleryl-CoA Dehydrogenase [Pisum sativum]
          Length = 408

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 20/236 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  +  ++ DG Y L+G+K W  +  ++   ++ A+ +   G   +
Sbjct: 150 LAMSEPNSGSDVVGMKCKADRV-DGGYVLNGNKMWCTNGTVAQTLVVYAKTDITAGSKGI 208

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P     Q+L +K+G R + T EL F N F   + D NV     + + +++ 
Sbjct: 209 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCF---VPDENVLGKEGKGVYVMMS 264

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG     M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +
Sbjct: 265 GLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSLQSSRS 324

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GY+ E
Sbjct: 325 YVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNE 373


>gi|239825998|ref|YP_002948622.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239806291|gb|ACS23356.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 401

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+A+I++   +  D  Y L+G K W     ++D FI+ A 
Sbjct: 114 PQAKGEKIGAFGLTEPNAGSDVASISTTAVRDGD-YYILNGQKTWISLCDIADHFIVFAY 172

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +       +  F+V R +      G   + +K K+G R+  T EL F N     +   N
Sbjct: 173 TDKSKKHRGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 224

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD+   +V+   V L  A     + Y   R   G  +    ++++
Sbjct: 225 LLGEEGEGFKIAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQ 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA +   +  +  L +++    ++ +  + EA+ A+ +A       C  A     +A++
Sbjct: 285 MIARMEAGLQISRLLVYKVGFLKNQGRRTTREASLAKWIA-------CDFANQAADDAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY  E  + R+ R S A  I  G+
Sbjct: 338 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 366


>gi|5869967|emb|CAB55555.1| auxin binding protein (ABP44) [Pisum sativum]
          Length = 409

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 20/236 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +  +  ++ DG Y L+G+K W  +  ++   ++ A+ +   G   +
Sbjct: 151 LAMSEPNSGSDVVGMKCKADRV-DGGYVLNGNKMWCTNGTVAQTLVVYAKTDITAGSKGI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P     Q+L +K+G R + T EL F N F   + D NV     + + +++ 
Sbjct: 210 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCF---VPDENVLGKEGKGVYVMMS 265

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG     M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +
Sbjct: 266 GLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSLQSSRS 325

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GY+ E
Sbjct: 326 YVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNE 374


>gi|33594204|ref|NP_881848.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33564279|emb|CAE43573.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332383618|gb|AEE68465.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 382

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255
           LTE   G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A+   E R   + C
Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV    E G+P G+   +   K+G     T ++ F N       LLG     TG    M
Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGG-KEGTGFRTSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  IAD   ++ 
Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA ++    A   D  ++ + EAA        +K +  +M   V   A++  GG+GYI E
Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAA-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346

Query: 428 RSIARHYRESPANSILLGS 446
            ++ R YR+     I  G+
Sbjct: 347 YAVERFYRDVRLFRIFEGT 365


>gi|225872674|ref|YP_002754131.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225794071|gb|ACO34161.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 398

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 24/246 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF-LV 258
           GLTE   G+D A   +   K  D  + L+G K F+++   +D  +++A  +   G   L 
Sbjct: 137 GLTEPGSGSDAAGARTTAVKKGDK-WVLNGSKTFITNGSYADVTVVIAVTDKTQGTHGLS 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             ++E G+P G    + +NK+G R++ T EL F +       LLG L    G V+ M+I 
Sbjct: 196 AFVVEKGTP-GFRPGKKENKLGLRASDTAELIFEDCEIPEENLLGKLG--EGFVDSMRI- 251

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   +S++ + + +A      ++ Y + R   G  + +   ++  +AD+A ++ AA 
Sbjct: 252 --LDGGRISIAALSLGIARGALDCSLKYVKERRQFGKAIAEFQGIQWKLADMATELDAAR 309

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+ R A   D     + E++ A++ A        ++A  +  EA++  GG G+I++   
Sbjct: 310 LLTQRAAVLKDAGNKVTRESSMAKLYA-------SEVAVRICDEAVQLHGGYGFIKDYPA 362

Query: 431 ARHYRE 436
            ++YR+
Sbjct: 363 EKYYRD 368


>gi|300771493|ref|ZP_07081368.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761482|gb|EFK58303.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 592

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 56/294 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +  ++G  Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 146 LTEPNSGSDANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDKNLTAFI 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V +        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 206 VEKDF-----GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILN 260

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
           +           I L +A +  S  R  L +AI YA  R     +  + P+     ++  
Sbjct: 261 IGR---------IKLGAATIGSS--RGVLTQAIKYANER-----VQFNLPISKFGAIRYK 304

Query: 359 IADIALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           IA+ A+ + A  + ++R            +A   DEAK++ +      I   I K W  +
Sbjct: 305 IAEAAIRLFAVESATYRAGQNIDDAYDALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSE 364

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           M   V+ E ++  GG GY  +  + R YR+S  N I  G+     L V+++L K
Sbjct: 365 MLDYVVDEGVQIYGGMGYSADAPMERAYRDSRINRIFEGTNEVNRLLVVDMLLK 418


>gi|239983661|ref|ZP_04706185.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455471|ref|ZP_06594861.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291358420|gb|EFE85322.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 382

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+T++  +  DG + L+G K F+S +  +  ++++A+  G  G   +  
Sbjct: 125 LTEPGAGSDAAALTTRAVRERDG-WALTGVKQFISGAGAAQVYVVMARTGGE-GAEGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313
            L D    G+ +   + K+G  +  T ++         G LLG       ++   +   +
Sbjct: 183 FLVDKDDPGVTFGPNERKMGWNAQPTRQVILDGARLPAGRLLGREGEGFRIAMNGLNGGR 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G R +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL 
Sbjct: 243 LGI----AACSLGGARSALDRSLAHLADREAFGTRLLDAQALRFRLADMATELAAARALV 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A + D+      +A Y   MA   K +      +V  +A++  GG GY+ E  I + 
Sbjct: 299 QQAAQALDQGDP---QAPYLCAMA---KRFATDTGFSVADQALQLHGGYGYLSEYGIEKI 352

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL GS   M
Sbjct: 353 VRDLRVHQILEGSNEIM 369


>gi|227536382|ref|ZP_03966431.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243758|gb|EEI93773.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 592

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 56/294 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +  ++G  Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 146 LTEPNSGSDANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDKNLTAFI 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V +        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 206 VEKDF-----GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILN 260

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
           +           I L +A +  S  R  L +AI YA  R     +  + P+     ++  
Sbjct: 261 IGR---------IKLGAATIGSS--RGVLTQAIKYANER-----VQFNLPISKFGAIRYK 304

Query: 359 IADIALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           IA+ A+ + A  + ++R            +A   DEAK++ +      I   I K W  +
Sbjct: 305 IAEAAIRLFAVESATYRAGQNIDDAYDALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSE 364

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           M   V+ E ++  GG GY  +  + R YR+S  N I  G+     L V+++L K
Sbjct: 365 MLDYVVDEGVQIYGGMGYSADAPMERAYRDSRINRIFEGTNEVNRLLVVDMLLK 418


>gi|226314482|ref|YP_002774378.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226097432|dbj|BAH45874.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 592

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 32/301 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +     +DG  Y L+G K W  ++  +D FI+ A+++G +   F+V
Sbjct: 149 LTEPGSGSDALGAKTTATLSADGTHYILNGEKQWITNAGFADVFIVYAKIDGEKFTAFIV 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R        G+ +   + K+G + ++T  +   +       LLG+     G V    IL
Sbjct: 209 ERTFP-----GVSFGPEEKKMGIKCSSTRTVILQDVPVPVNNLLGE--PGRGHVIAFNIL 261

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A+ +V   + ++  A +YA+ R      + + P++K  +A++A+   AA +  
Sbjct: 262 NVGRYKLAVGAVGSSKKAVELATNYAKERKQFKTPIANFPLIKNKLANMAVKTYAAESSV 321

Query: 374 FRLANSFDEAKSRSEEAA------------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +R    FD A +R  E A            YA I   I K +  ++    + E ++  GG
Sbjct: 322 YRTVGLFDTALTRLGEKADDGAEVAKAIADYA-IECSINKVFATEVLDYCVDEGVQIHGG 380

Query: 422 SGYIEERSIARHYRESPANSILLGSG--NAMVL--DVLNLLEKGTNLFEQLFSTLEQDLG 477
            G++ E  I   YR+S  N I  G+   N M++   ++    KG     Q  S+L+ DL 
Sbjct: 381 YGFMSEYEIENMYRDSRINRIFEGTNEINRMLIPDTLVKKAMKGELPLMQAASSLQADLM 440

Query: 478 S 478
           S
Sbjct: 441 S 441


>gi|330963775|gb|EGH64035.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 600

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   DG Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L +     G  N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNYDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L      + + +I + L + ++  SG   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|330502981|ref|YP_004379850.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917267|gb|AEB58098.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 382

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 19/262 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           + L +TE  GG+D+A + ++   + DG  Y ++G K F++S +   +  +A   G  G  
Sbjct: 125 MALAVTEPSGGSDVANLKTRA--VRDGEHYRINGSKTFITSGVRADYYTVAVRTGGEGFG 182

Query: 257 LVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
            V  LL E G+P G    R   K+G  ++ T EL F +       L+G  N     +   
Sbjct: 183 GVSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMAN 241

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  AIM+    +++L E++ +AR R   G  +    V+K  +A++A  +  +   
Sbjct: 242 FQSERLSLAIMANMTAQLALEESMKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREF 301

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A      +S  +E + A       K +   +A  +  +A++ +GG GY+ E  + R
Sbjct: 302 TYRQAAQMAAGRSVIKEISMA-------KNFATDIADRLTYDAVQIMGGMGYMRESLVER 354

Query: 433 HYRESPANSIL-LGSGNAMVLD 453
            YR+   N IL +G G   +++
Sbjct: 355 LYRD---NRILSIGGGTREIMN 373


>gi|319902924|ref|YP_004162652.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319417955|gb|ADV45066.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 568

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKREGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIQRERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|257485734|ref|ZP_05639775.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289627365|ref|ZP_06460319.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648079|ref|ZP_06479422.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|320321712|gb|EFW77810.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331464|gb|EFW87404.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330880908|gb|EGH15057.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330890641|gb|EGH23302.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330986890|gb|EGH84993.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331012017|gb|EGH92073.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 393

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|289582554|ref|YP_003481020.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532107|gb|ADD06458.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 387

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 51/311 (16%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALM------TTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           LM +LEAG     S+ S     +M       +    ++W PK+   E             
Sbjct: 77  LMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQGE------------- 123

Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----V 249
            A+G  GLTE   G++ + + +  +   DG Y L+G K W  +SP+SD  I+ A+     
Sbjct: 124 -AVGCFGLTEPEHGSNPSGMETYAEADGDG-YVLNGSKTWITNSPISDVAIVWARDRSSE 181

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +  V  FLV     +   +G+   ++  K+  R++ T E+  +N       +L  ++   
Sbjct: 182 DNPVRGFLV-----ETDRDGVSTNKITEKLSLRASITGEIGLNNVHVPEENVLPGVSGMK 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP+  +    Y   A  ++   R +  EA  YA+ R   GG +    + +R +A++A  I
Sbjct: 237 GPLSCLTQARY-GIAWGAIGAARDAFEEARQYAQDREQFGGPIGRFQLQQRKLAEMATQI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAP----ITKYWCCKMAPAVIAEAMECIGGS 422
             A  L++RLA    E K R +       M P    ++K    +MA      A E +GG+
Sbjct: 296 TLAQLLAYRLA----ELKERGD-------MQPHHVSLSKRNNVRMARDQTRVAREMLGGN 344

Query: 423 GYIEERSIARH 433
           G   + S  RH
Sbjct: 345 GITTDYSPMRH 355


>gi|319763886|ref|YP_004127823.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118447|gb|ADV00936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 549

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 38/287 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           + +TE   G+D+A +  +  + ++G + L+G K W   +  +   +++A+ +     G  
Sbjct: 270 IAMTEPDFGSDVAGLQLKATR-AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHR 328

Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           G    LV +   +G          G  + R    IG R   + +L F N   FL+ D N+
Sbjct: 329 GLSLLLVEKPAFEGHEFAVAQEGGGTLHGRAIPTIGYRGMHSFDLVFEN---FLVPDENL 385

Query: 305 STGPVEDMKILIYLDSAIM---------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             G     K   +  + +M         ++  MR ++  AI YA  R V G  L    + 
Sbjct: 386 VGGDAGLGKGFYFTMTGMMGGRMQTAGRALGVMRAAVRAAIRYAGDRQVFGAPLASYQLT 445

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA +A    A   L++ +A   D    R E        A + K   C+ A  V  EA
Sbjct: 446 QVKIAAMAARFVACRWLAYDVARLLDAGGGRME--------ASLVKLLACRSAELVTREA 497

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           ++  GG GY EE +++R++ ++   SI  G+   + L V+  +LLE+
Sbjct: 498 LQIHGGMGYAEETAVSRYFVDARVLSIFEGAEETLALKVIARSLLEQ 544


>gi|239930100|ref|ZP_04687053.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291438439|ref|ZP_06577829.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291341334|gb|EFE68290.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 608

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+ L D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKSAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399
                 P ++R++           AL     S + A    EA      A +A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASIQDAIQVKEANGEDASADHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + A   +A++++  GGSG+++E  I ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447


>gi|254392883|ref|ZP_05008051.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326440112|ref|ZP_08214846.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197706538|gb|EDY52350.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 393

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255
           L+E   G+D A++ ++   + DG  + ++G K W     ++D + +LA+  G     +  
Sbjct: 133 LSEPAAGSDAASLRTR--AVRDGEDWVITGTKAWITHGGVADFYTVLARSGGEGSRGITA 190

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP     G   GL     + K+G + + T +L F    G  + D        +   I 
Sbjct: 191 FLVP-----GDAPGLTAAAPEKKMGMKGSPTAQLHFD---GVRVPDTRRIGEEGQGFTIA 242

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A 
Sbjct: 243 LSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGLRFLLADMATRIEAG 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +L    A   D+    S EAA A       K +C   A +V  +A++ +GG GY  +  
Sbjct: 303 RSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDAVQVLGGYGYTADFP 355

Query: 430 IARHYRESPANSILLGS 446
           + R  RE+    I+ G+
Sbjct: 356 VERLMREAKVLQIVEGT 372


>gi|46198546|ref|YP_004213.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
 gi|46196168|gb|AAS80586.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
          Length = 378

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 39/253 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ ++ ++  D  Y L G K F+S + +++ F++ A+ +   G     C
Sbjct: 120 LTEPEAGSDAASLKTRARREGD-FYVLEGQKTFISHANVAEVFLVFAKTDPEKGAKGITC 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310
           FLV R       +G+    LK K+G R+        ++T    L  + V    V     E
Sbjct: 179 FLVER------GDGVKTSPLKGKLGLRA--------ADTGMVFLDGVRVPKDRVLGKEGE 224

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +I L  LD+  +S++   V L +     ++ YA  R   G  +    +++  +A + L
Sbjct: 225 GFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYAGERKQFGKPIAQFQLVQEHLAAMKL 284

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+ AA  L++R A    + +  + EA+ A++ A        + A  V   A++  GG G+
Sbjct: 285 DLEAARLLTYRAAWKKVKGEPYTLEASLAKLFA-------SEAANRVAYRAIQVHGGYGF 337

Query: 425 IEERSIARHYRES 437
            EE  +AR YR++
Sbjct: 338 FEEYEVARLYRDA 350


>gi|26988940|ref|NP_744365.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24983754|gb|AAN67829.1|AE016414_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 375

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 170 TDPEAGKRGISAFIVPT----DSP-GYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLG 224

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 E  KI L  L+   + ++   V +A A       YA  R   G  LI+   +  
Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I+ A  +    A   D  +        A + A + K +  +MA  V ++A++
Sbjct: 282 RLADMATKISVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +GG GY+ +  + R YR+     I  G+ +
Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365


>gi|294811499|ref|ZP_06770142.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294324098|gb|EFG05741.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 408

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255
           L+E   G+D A++ ++   + DG  + ++G K W     ++D + +LA+  G     +  
Sbjct: 148 LSEPAAGSDAASLRTR--AVRDGEDWVITGTKAWITHGGVADFYTVLARSGGEGSRGITA 205

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP     G   GL     + K+G + + T +L F    G  + D        +   I 
Sbjct: 206 FLVP-----GDAPGLTAAAPEKKMGMKGSPTAQLHFD---GVRVPDTRRIGEEGQGFTIA 257

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDS  + ++   V +A     EA+ YA  R   G  + D   ++  +AD+A  I A 
Sbjct: 258 LSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGLRFLLADMATRIEAG 317

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +L    A   D+    S EAA A       K +C   A +V  +A++ +GG GY  +  
Sbjct: 318 RSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDAVQVLGGYGYTADFP 370

Query: 430 IARHYRESPANSILLGS 446
           + R  RE+    I+ G+
Sbjct: 371 VERLMREAKVLQIVEGT 387


>gi|254712074|ref|ZP_05173885.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715144|ref|ZP_05176955.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261216854|ref|ZP_05931135.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261319721|ref|ZP_05958918.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|260921943|gb|EEX88511.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261292411|gb|EEX95907.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
          Length = 384

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + Y   R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYTLDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|307329464|ref|ZP_07608625.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306884873|gb|EFN15898.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 608

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 167/372 (44%), Gaps = 56/372 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    +SD  I  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAAQQEDGSWHIEGVKRFITSGEHDLSDNIIHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  F+VP+   D      G  NG+    +++K+G R++ T EL F       G+LLGD
Sbjct: 224 KGLSLFVVPKYDFDWDSGELGERNGVYATNVEHKMGLRASNTCELTFGADHPAKGWLLGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
            +   G  +  KI+ +  +     +++ +      A+ YA+ R V G             
Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALEYAKER-VQGPDLAAFTDKTAPR 340

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYA-----RIMAPI 399
             +   P ++R++           AL    A+  DE   K  + E A A      ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGLRALVLYTASVQDEILVKEAAGEDASAVSRLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------ 453
            K +  + A   +A++++ IGGSGY++E  + ++ R++  +++  G+      D      
Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAIQGQDYFFRKI 460

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG--LARFLTEKIALA 511
           V +  +  T + E++   L +   ++G + +   RD ++    D    +   LT+  A  
Sbjct: 461 VRDQGQALTVVSEEIKKFLAE---AAGGEELEAARDQLAQAAVDLEAIVGAMLTDLAATE 517

Query: 512 SSAAALYRAGMN 523
              +++Y+ G+N
Sbjct: 518 QDVSSIYKVGLN 529


>gi|284041703|ref|YP_003392043.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283945924|gb|ADB48668.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 382

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 52/308 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           + L  +    +DW P++ + E               +G  GLTE   G+D   + ++   
Sbjct: 98  IYLFGSEEQKRDWLPRLTAGER--------------LGAFGLTEPEAGSDAGNVQTRA-T 142

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSP---N 268
           + +G + ++G K F+++  +D    +++  V G        +   LVP    +G+P    
Sbjct: 143 LDNGEWVVNGAKQFITNAGTDISGCVVITAVTGTDDRGRKEISNILVP----NGTPGYEQ 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G  Y+    K+G  ++ T  L F++    +  D  V        + L  LD   + V+ M
Sbjct: 199 GTPYR----KMGWNASDTRPLTFTDCR--VPEDQLVGPRGAGFKQFLRVLDIGRIGVAAM 252

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V LA     EA+ Y++ R   G  +     ++  +AD+A ++AAA  L++  A   D  
Sbjct: 253 GVGLAQGALDEAVKYSKERKAFGQPISKFQAIQGKLADVATELAAARLLTYNAAFLKDRG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  AA A++          ++A     EA++  GG GYIEE  + R YR+  A  + 
Sbjct: 313 RDFSLTAAQAKLK-------TGRLAVRASEEAVQIHGGYGYIEEYPVCRFYRD--AKILT 363

Query: 444 LGSGNAMV 451
           +G G   V
Sbjct: 364 IGEGTDEV 371


>gi|282880130|ref|ZP_06288850.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306003|gb|EFA98043.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 575

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 34/329 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKNDCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G   +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVDVRHIENKLGIHGSPTCELVYKNAKAELCGSTRL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V +A     EA+ YA+ R   G  +I+ P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGVAQEAYNEAVAYAKERQQFGQPIIEFPAVYDMLSRMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ A   D  K+              R+E   Y R+     P+ K    + A     
Sbjct: 347 SLLYQTARYVDIYKALEDIQRDRKLTPEERAEMKKYTRLADAFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQ 467
           +A+   GGSG+I E    R YR++   SI  G+    V+  +  +  GT       + EQ
Sbjct: 407 DAISVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQMQVVAAIRYIMNGTYLNIMREMIEQ 466

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKE 496
             S     L    + +++   +SI+  K+
Sbjct: 467 PVSEALTPLRQKVEAMLSQYEESIAFVKD 495


>gi|149924251|ref|ZP_01912624.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149814876|gb|EDM74441.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 382

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 20/253 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA  +   +  D  Y ++G K W  + P +D  I++   +   G   +  
Sbjct: 125 LSEPDAGSDAAAQKTVAVRDGDH-YVITGVKNWITNGPQADTGILMLMTDKAKGHRGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
            + D +  G+      +K+G R++ + ++ F       S   G       V+   ++  +
Sbjct: 184 FIIDMNGEGVSRGPKDDKLGIRASHSCQIFFTDHRVHESQRLGNEGDGFKVAMSTLDCGR 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I    A  ++   R +   A  YA  R   G  + D   +   +AD+A +I AA  L+
Sbjct: 244 IGI----AAQALGIARGAFEAAARYATERKTFGKAIADHQAISFMLADMATEIDAARLLT 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A      K  S E+A  ++MA        ++A  V   A++  GG+GY+ E  + R 
Sbjct: 300 YRAAALKAAGKRHSVESAMCKLMA-------SEVANKVAKNAVQIFGGNGYVSEYPVERA 352

Query: 434 YRESPANSILLGS 446
           YR++    I  G+
Sbjct: 353 YRDAKITEIYEGT 365


>gi|121596068|ref|YP_987964.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42]
 gi|120608148|gb|ABM43888.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42]
          Length = 396

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
            K + PK+ S E+              +G L ++E   G+D+ ++  + +    G Y L+
Sbjct: 116 RKKYLPKLISGEH--------------VGALAMSEPGAGSDVISMKLRAED-KGGYYLLN 160

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K W  + P +D  ++ A+ E  +G   V   L +    G    +  +K+G R + T E
Sbjct: 161 GSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGE 220

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRR 342
           L F N     +   NV  G     K+L+  LD     ++G     M+  +   + Y   R
Sbjct: 221 LVFQNV---EVPAENVLGGVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDR 277

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +  +++  +AD+   + A  + ++ +A + D   S  +     R        
Sbjct: 278 KQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDMLGS--DHVRQVRKDCASVIL 335

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           WC + A  +  E ++  GG+GYI E  + R +R++    I  G+
Sbjct: 336 WCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAKLYEIGAGT 379


>gi|90417337|ref|ZP_01225263.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
 gi|90330922|gb|EAS46185.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
          Length = 390

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 25/286 (8%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++A +   +E  P   A  ++ S+AI    TE   G+D+A +T+  +   D  Y ++G K
Sbjct: 112 NFASEAIKQEVAPPVLAGTKRISLAI----TEPGAGSDVAHLTTTARLDGDH-YVVNGSK 166

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +++  M+  +   A   G  G   V  LL      G+    L  K G   + T  + F 
Sbjct: 167 TYITGGMNANWFTTAVRTGGEGAGGVSALLIPADLEGVSRTALDKKQGWWCSDTATIYFD 226

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHV 344
           N       L+G  N          I+   ++  +++S       RV L +A+++ R R  
Sbjct: 227 NVRVPAANLVGQENRGFSV-----IMTNFNAERLAMSASMEAFSRVCLEDAVNWGRERKT 281

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L D  V++  IA++   I +      ++       +  + + A  ++ +  T  +C
Sbjct: 282 FGQRLADHQVIRHKIAEMKQRINSTQCYLNQICAEVQAGREYAGDIALLKVQSSQTMEFC 341

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +       EAM+ +GG GY+    + R YRE   N+I  GS   M
Sbjct: 342 AR-------EAMQILGGMGYMRGNRVERIYREVRVNAIGGGSEEIM 380


>gi|317121885|ref|YP_004101888.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591865|gb|ADU51161.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 379

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 42/324 (12%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S ++T A+ V+L  TP         +F S E      AP  +       GLTE   G+  
Sbjct: 82  STALTVAAHVSLGCTPLY-------LFGSDEQKARWLAPALRGEYVAAFGLTEPEVGSHT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLLEDG 265
           AAI ++  +  D  + + G K F+++     ++++A V     GR G    LVPR     
Sbjct: 135 AAIRTRAVQDGDA-WVIHGTKAFITNGSRADYVVVAAVTDPERGREGISNILVPR----D 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +P     +R + K+G  ++ T EL F         L+G+           + L  LD   
Sbjct: 190 APGWRAVRRYE-KMGLHASDTAELVFDGCRVPLDHLVGERGKG-----HAQFLRTLDGGR 243

Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +  + V +A+A     + YAR R   G  +     ++  +AD+A ++ AA  L +R A
Sbjct: 244 IGIGALSVGIAQACLDAALEYARYRRQFGRPISKFQAIQFKLADMATELEAARLLVYRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +    EAA A++ A        ++A     EA++  GG+GY+ +  + R+ R+ 
Sbjct: 304 WLRDRGRPYRREAAMAKLFA-------SELAVRAALEAIQIHGGAGYVRDYPVERYLRD- 355

Query: 438 PANSILLGSGNAMVLDVLNLLEKG 461
            A  + +G G + +  ++   E G
Sbjct: 356 -AKLMEIGEGTSEIQRLVIARELG 378


>gi|302342605|ref|YP_003807134.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639218|gb|ADK84540.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 606

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/394 (21%), Positives = 160/394 (40%), Gaps = 73/394 (18%)

Query: 152 MSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +TS  A ++    T    + + P+++S ++  T             + LTE   G+
Sbjct: 127 MYPLLTSGNARLIEAFGTEADRELFVPRMYSGQWAGT-------------MCLTEPLAGS 173

Query: 210 DIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254
           D+  + +      D     +Y + G K F+S+   D       ++LA++EG       + 
Sbjct: 174 DVGWLETSATPDPDSPDKRVYKIKGRKRFISAGNHDLTENIIHLLLARIEGAPHGTKGIS 233

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
            F+VP++  +     G PN +    +++K+G   +AT  L F  +    G LLG+ +   
Sbjct: 234 LFIVPKIWVEPDGALGRPNDVVCTGIEHKMGIHGSATCALHFGGSDQCRGILLGEPHTGM 293

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD----- 361
             +  M     + + +M ++ +  S  +A     +R V G    D+   +  I +     
Sbjct: 294 AKMFQMMNEARVGTGLMGLA-LSASAYDAARTWAKRRVQGPPFTDRRGQRVKIINHEDVR 352

Query: 362 -IALDIAAAT-ALSFRLANSF---------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            + L++ A T A+   +A ++          +A +R + A    +  P+ K +C     +
Sbjct: 353 RMLLNMKAGTEAMRALIAKTYYLMDVARFEPDAAARQKAAGLVELYTPLVKAYCTDFGFS 412

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           +  EA++  GG+GY       ++ R+    SI  G+     LD++               
Sbjct: 413 LTREALQVFGGAGYCNGFPAEQYVRDCKILSIWEGTNYIQSLDLVG-------------- 458

Query: 471 TLEQDLGSSGKKVIT-ILRDSISLCKEDKGLARF 503
              + LG  G  V    L D  + C ++ G A F
Sbjct: 459 ---RKLGLEGGAVFQGALADIQTFCADNAGDADF 489


>gi|284165847|ref|YP_003404126.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015502|gb|ADB61453.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 378

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 40/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
             L+E   G++ A + ++  +  D  Y ++G K W  +   +  +I+ A+ +      V 
Sbjct: 120 FALSEPHAGSNPAEMATEASREGDE-YVINGEKQWITNGQRAGVYILFAKTDRDDPNSVT 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312
            FLVP     G  +GL     ++K+G R++ T  L F         D+ +   PVE+   
Sbjct: 179 QFLVP-----GDVDGLSVGEKEDKLGLRASDTTSLTFD--------DVRI---PVENRLT 222

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           +    L +A   ++G R+++A            EA+ Y++ R   G  + +   ++  +A
Sbjct: 223 EEGKGLSAAFHILTGGRIAIAAQSVGLAQCALDEALAYSQEREQFGDPIAEIQSIRHKLA 282

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A    AA +L+   A +  E  +    A    + A + KY+  + A  V  EA++  G
Sbjct: 283 EMATRTKAARSLTRHAARTRHETDADGTGA----LEASMAKYFASETAMFVTNEAVQIHG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ E  + R YR++    I  G+
Sbjct: 339 GYGYVTEGEVERLYRDAKITEIYEGT 364


>gi|163854671|ref|YP_001628969.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258399|emb|CAP40698.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 382

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 33/252 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE-----GR 252
             LTE   G+D  A++ +   + DG  Y L+G K F++ +P++  F ++A+         
Sbjct: 122 FALTEPDAGSD--AMSLRTSAVRDGDHYVLNGTKRFITNAPVAGLFSVMARTAPERKASS 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           + CFLV    + G+P GL   +   K+G     T ++ F N       LLG     TG  
Sbjct: 180 ISCFLV----DAGTP-GLTLGKPDKKMGQAGALTCDVVFDNCRVPATALLGG-EEGTGFR 233

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             M++L   D   + +S + V +AE     A+ YA  R   G  + +  +++  IAD   
Sbjct: 234 TAMRVL---DKGRLHISALCVGIAERLVRDAVKYATERKQFGQPIAEFQLVQAMIADSQA 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA ++    A   D  ++ + EAA         K +  +M   V   A++  GG+GY
Sbjct: 291 ELYAARSMVLDAARKRDRGENTTLEAA-------CCKLYATEMVGRVADRAVQIHGGAGY 343

Query: 425 IEERSIARHYRE 436
           I E ++ R YR+
Sbjct: 344 ISEYAVERFYRD 355


>gi|229030057|ref|ZP_04186121.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228731227|gb|EEL82145.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 569

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   D A   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDAAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|108797090|ref|YP_637287.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866175|ref|YP_936127.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108767509|gb|ABG06231.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692264|gb|ABL89337.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 588

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 41/304 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM     +  + L+E + G+ +A IT++ +   DG Y L G K ++S    +       +
Sbjct: 152 PMLAGRFSGTMALSETQAGSSLADITTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNL 211

Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292
           +LA++ G       +  F+VP+ L  EDGS    N +    L +K+G R      L F  
Sbjct: 212 VLAKIPGGPPGTKGISLFVVPKYLVAEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGE 271

Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
                       G+L+G+ +     +  M     L   + +V+       +++ YAR R 
Sbjct: 272 GVFNPGGEPGAVGYLVGEPHRGITYMFRMMNEARLGVGMGAVALGYTGYLKSVKYARERP 331

Query: 344 VSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
               +    P            +KR +      +  A AL+   A   D   ++      
Sbjct: 332 QGRPVTAKDPATPQVPIIEHADVKRMLLAQKSYVEGALALALYCARLVDLGDNQD----L 387

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             I+ P+ K W  +      + A++  GG GY  E  + +HYR++  N I  G+     L
Sbjct: 388 LDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSL 447

Query: 453 DVLN 456
           D+L 
Sbjct: 448 DLLG 451


>gi|296137158|ref|YP_003644400.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797280|gb|ADG32070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 375

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ 248
           P+ +        LTE + G+D + + +  +   D  Y L G K F++S  +    I+LA 
Sbjct: 111 PVARGEWIGAFALTEPQAGSDASNLRATARLEGDH-YVLDGVKQFITSGKNGQVAIVLAA 169

Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296
            +   G+ G   FLVP         G   +RL++K G  ++ T ++ F        N  G
Sbjct: 170 TDRAAGKKGISAFLVPT-----DTPGYIVERLEDKTGQSASDTAQIRFEGCRVSAVNRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YAR R   G  + +   ++
Sbjct: 225 AEGEGYKIALSGLEGGRIGI----AAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A+ I AA  L +  A+  D      +EAA A++MA        +MA  V + A+
Sbjct: 281 FRLAEMAMQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMAS-------EMAERVCSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R +R+     I  G+ +
Sbjct: 334 QIHGGYGYVADFPVERIWRDVRVCQIYEGTSD 365


>gi|289581966|ref|YP_003480432.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289531519|gb|ADD05870.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256
           L+E   G+D+ A+ +  +K  D  Y L+G K W  +  +SD   + A+ +   G      
Sbjct: 125 LSEAGAGSDVPAMETTAEKDGD-EYVLNGGKLWISNGSVSDTVTVFAKTDADAGNKGISS 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            V R  ED   +G   +  + K+G++   T EL F +       LLG      G V+ +K
Sbjct: 184 FVVRPEED---DGFIVENTEEKLGDKGCPTAELRFDDLRIPENRLLG--AEGDGFVQALK 238

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    +  A  S+   R +  EA  YA  R   G  + +   +K  +AD+   I AA  
Sbjct: 239 TLNGGRITIAARSIGIARAAFDEARDYAGEREQFGQPIGEFQSIKHKLADMDTKIQAARM 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  + A+     ++  ++AA A++       +  +++  V  E ++  GG GY ++    
Sbjct: 299 LMHKAADKKIRGENYIKDAAQAKL-------YASEISREVANEGIQIHGGYGYTKDFPAE 351

Query: 432 RHYRESPANSILLGS 446
           R YR++  N I  G+
Sbjct: 352 RFYRDAKLNEIYEGT 366


>gi|187477404|ref|YP_785428.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115421990|emb|CAJ48512.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 397

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 27/245 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRV 253
            GLTE   G+D A + ++  KI DG Y LSG K W  +SP++D F++ A     + +G++
Sbjct: 137 FGLTEPNHGSDPAGMETRAVKI-DGGYKLSGAKMWITNSPIADVFVVWAKCVGGEFDGKI 195

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F++ + ++     GL    +  K+G R++ T E+         + D  +  G      
Sbjct: 196 RGFILEKGMK-----GLTAPAIHGKVGLRASITGEIVMDEV---EISDAQMMPGVSGLRG 247

Query: 314 ILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAA 368
               L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  +I  
Sbjct: 248 PFTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITL 307

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A     RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E 
Sbjct: 308 ALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARVARDMLGGNGISDEF 360

Query: 429 SIARH 433
            +ARH
Sbjct: 361 GVARH 365


>gi|261404135|ref|YP_003240376.1| acyl-CoA dehydrogenase domain-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261280598|gb|ACX62569.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. Y412MC10]
          Length = 596

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 25/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +   DG  Y L+G K ++++   +D FI+ A+++G     F+V
Sbjct: 152 LTEPTSGSDALGAKTTARLSDDGEYYILNGSKLYITNAGFADIFIVYAKIDGEHFTAFIV 211

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + +E     G      + K+G + ++T  L F +       LLG++        ++  +
Sbjct: 212 EKEME-----GFTLGPEEKKMGIKGSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNI 266

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  +V   + S+  +  YA  R      +   P+M++ +A++ +      ++ +R
Sbjct: 267 GRYKLAAGTVGAAKESIELSAKYANTRKQFDTPISQFPLMRKKLAEMNITAFVMESMVYR 326

Query: 376 LANSFDEAKS----RSEEAA---------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A   DEA       SE+A          YA I   I K +C +    V  EA++  GG 
Sbjct: 327 TAGLLDEAMQDIDYNSEDAGIHSAAAISDYA-IECSINKVFCSEGLDNVADEAVQIHGGY 385

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI+E  + R YR+S  N I  G+
Sbjct: 386 GYIQEYKVERIYRDSRINRIFEGT 409


>gi|94311587|ref|YP_584797.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355439|gb|ABF09528.1| Glutaryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 397

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 18/262 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K++ G Y L+G K W  +
Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YELTGAKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A++ G  G   +   + +    GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLMGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
             + + N+  G          L+SA   ++   +  AE     A  Y   R   G  L  
Sbjct: 233 --VPEENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAA 290

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD+  +I        RL    DE  +  E       +  I K   C  +  +
Sbjct: 291 TQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343

Query: 412 IAEAMECIGGSGYIEERSIARH 433
              A + +GG+G  +E  + RH
Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365


>gi|255320472|ref|ZP_05361653.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378367|ref|ZP_06071524.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255302444|gb|EET81680.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299652|gb|EEY87564.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 407

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  +++++ +K+  G Y LSG K W  +
Sbjct: 123 FGSEEQKQKYLPKLATGEFIGCFGLTEPDHGSDPGSMSTRAKKVEGG-YRLSGAKMWITN 181

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    +G VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 182 SPIADVFVVWAKEVSTDGNVGP-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 239

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 240 VFVPEENAFPEVQGLRGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 293

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 294 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 346

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 347 GKALDIARLARDMLGGNGISDEFGVARH 374


>gi|163796872|ref|ZP_02190829.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159177861|gb|EDP62410.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 390

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 112/253 (44%), Gaps = 16/253 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L ++E   G+D+ ++ ++ +K  D      G  W  + P +D  ++ A+ +       + 
Sbjct: 131 LAMSEPGAGSDVVSMRTRAEKKGDRYIVNGGKMWITNGPTADVVVVYAKTDPDANQHGIT 190

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             L +    G    +  +K+G R + T EL F +       +LG +N   G V+ +   +
Sbjct: 191 AFLIEKGMKGFSIAQKLDKLGMRGSDTGELVFEDVEVPEENVLGQIN---GGVKVLMSGL 247

Query: 317 YLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             + A+++      M+  +   I Y   R   G  + +  +M+  +AD+ + + AA +  
Sbjct: 248 DYERAVLAAGPTGIMQACMDVVIPYVHERKQFGRSIGEFQIMQGKLADMYVTMNAAKSYV 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + D  +   ++AA A + A     W       +  EA++C+GG+GY  E    R 
Sbjct: 308 YTVAKACDRGEVTRKDAAGAILYAAEKATW-------MTLEAIQCLGGNGYTNEYPTGRL 360

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 361 LRDAKLYEIGAGT 373


>gi|146299692|ref|YP_001194283.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146154110|gb|ABQ04964.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 27/280 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T+  IG  GLTE   G+D   + +   K  D  + ++G K F++ 
Sbjct: 101 FGNEEQKKKYLPKLATAEFIGAWGLTEHNTGSDAGGMNTTAVKDGD-FWIINGAKNFITH 159

Query: 238 PMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            +S   A +++   E      +   +LE G   G    + +NK+G R++ T EL F    
Sbjct: 160 AISGDVAVVIVRTGEKGDSKGMTAFVLEKGMA-GFSSGKKENKLGMRASETAELVFD--- 215

Query: 296 GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           G  + D N    V  G V+ MKIL   D   +S+  + + +++     A+ Y++ R+  G
Sbjct: 216 GCRVPDANRLGEVGQGFVQAMKIL---DGGRISIGALSLGISKGAYEAALKYSKERYQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +   +   +AD+A +I A+  L  + A    + K  +   A A++ A      C K
Sbjct: 273 QPISNFQGISFKLADMATEIEASELLLHKAAYLKQQHKPVTTSGAMAKMYASEA---CVK 329

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A     EA++  GG GY ++  + + YR+S   +I  G+
Sbjct: 330 IAN----EAVQIHGGYGYTKDFPVEKFYRDSKLCTIGEGT 365


>gi|114569090|ref|YP_755770.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339552|gb|ABI64832.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 388

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 18/267 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLV 258
           + ++E   G+D+ ++ +   K  +G Y ++G K F+++  S  FI++ A+ +   G   V
Sbjct: 132 IAMSEPGTGSDLQSVKTTAIKDGNG-YRINGQKTFITNGGSANFIIVVAKTDPEKGYDGV 190

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
             L+ E     G    RL +K+G ++  T EL F + +     LLG      G ++ M+ 
Sbjct: 191 SLLMVETDKVEGFRRGRLLDKVGMKAQDTAELFFEDVWVPADALLGQ-EEGQGFIQLMQQ 249

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    L  A+  V  M+ +L E I+Y + R   G     +P++K       L   A    
Sbjct: 250 LPQERLQIAVQGVGAMKRALHETINYTKEREAFG-----RPILKFQNTQFKL---AECKT 301

Query: 373 SFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              LA  F      R  +       A + KYW  +    V+ E ++  GG GY+ E  IA
Sbjct: 302 KATLAEVFTHHCSERLMKGELDAATASMAKYWVSEAQNEVMDECVQLHGGYGYMREYPIA 361

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           + + +S    I  G+   M L +   L
Sbjct: 362 KMWTDSRVQRIYGGTNEIMKLLIARTL 388


>gi|326564442|gb|EGE14669.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis
           103P14B1]
          Length = 608

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 52/331 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406
            ++  +           AL + L+  F +  ++ E   E  +A     ++ PI K +  +
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTE 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                    ++  GG GYI E  + ++ R++  + +  G+     LD+L           
Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497
                  + LGS G+ +    +     C+E+
Sbjct: 453 ------RKVLGSQGRMLANFTQIIHQFCQEN 477


>gi|149191207|ref|ZP_01869464.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
 gi|148834956|gb|EDL51936.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
          Length = 384

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +   +  D  Y ++G K F+S    +D  +++A+  G  G   +  
Sbjct: 124 LTEATAGSDAASLLTTATRQDDS-YIINGSKAFISGGGETDVLVVMART-GETGAKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316
            +     +G+ Y R + K+G  S  T  + F N      + LG+     G    MK L  
Sbjct: 182 FVVPAHCDGISYGRKEPKMGWNSQPTRAITFDNVVVPATYRLGE--EGQGFTFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL--- 372
             ++ A  SV   + +L +A  Y   R   G  L     ++  +AD+A ++ AA  +   
Sbjct: 240 GRINIATCSVGTAQHALNQAAQYLHERKQFGRSLSQFQALQFKLADLATELVAARQMVRL 299

Query: 373 -SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +F+L N   +A +     A A+  A    +  C          ++  GG GYI+E S+ 
Sbjct: 300 AAFKLDNQHPDATTY---CAMAKRFATDVGFNVCD-------GVLQLFGGYGYIKEYSLE 349

Query: 432 RHYRESPANSILLGSGNAM 450
           RH+R+   + IL G+   M
Sbjct: 350 RHFRDVRVHQILEGTNEIM 368


>gi|187922466|ref|YP_001894108.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713660|gb|ACD14884.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGNVAIVMAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
             +      +  F+VP         G    R+++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DTKGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|70998024|ref|XP_753744.1| isovaleryl-CoA dehydrogenase IvdA [Aspergillus fumigatus Af293]
 gi|66851380|gb|EAL91706.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus
           Af293]
 gi|159126519|gb|EDP51635.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus
           A1163]
          Length = 462

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 18/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 197 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGI 255

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     LLG+LN      + +++L
Sbjct: 256 SAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENLLGELN------KGVRVL 309

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   ++A+
Sbjct: 310 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGAPIAHNQLIQGKLADMYTKLSAS 369

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A ++  A   D + +  E +   +  A    Y   + A     +A++ +GG+GYI E  
Sbjct: 370 RAYTYATARHIDNSAATGEVSIRTQDCAGAILY-AAERATECALDAIQLMGGNGYINEIP 428

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 429 AGRLLRDAKLYEIGAGT 445


>gi|323488555|ref|ZP_08093799.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323397772|gb|EGA90574.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 402

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 35/273 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA- 247
           P  K       GLTE   G+D+AA+ S   K  D  Y L+G K W     ++D FI+ A 
Sbjct: 113 PQAKGEKVGAFGLTEPSAGSDVAAMKSTAVK-KDDHYLLNGQKTWISLCDVADHFIVFAY 171

Query: 248 ---QVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
              Q E    +  F+V R        G   + +K K G R+  T EL F +       LL
Sbjct: 172 TGNQAEKHNAISAFIVERTWP-----GFSSKAIKGKHGIRAGNTGELFFEDVKIPIENLL 226

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQP 353
           G         E  KI +  LD+   +V+   V      L  ++ Y R+R   G  +    
Sbjct: 227 GKEG------EGFKIAMSALDNGRFTVAAGAVGQIMACLEASVSYCRQRQTFGKEIGRHQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ IA++      +  L +R     ++ K  + E + A       K+  C  A     
Sbjct: 281 LVQQMIANMEAGFQMSRLLVYRAGELKNQGKRNTRETSLA-------KWQACDFAYKAAD 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A +  G  GY +E  ++R+ R S A  I  G+
Sbjct: 334 DAFQIHGAYGYSDEYPVSRYLRNSKAPVIYEGT 366


>gi|313679826|ref|YP_004057565.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152541|gb|ADR36392.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 582

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 41/269 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  A  +      DG  Y L+G K F+++   +D FI+ A+++G +   F+V
Sbjct: 150 LTEPGSGSDALAAKTTATLSEDGKHYVLNGTKQFITNAGFADVFIVFAKIDGEKFTGFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
               E G+P GL     ++K+G RS++T ++        +L D+ V   PVE++      
Sbjct: 210 ----EKGTP-GLSLGPEEHKMGIRSSSTRQV--------ILEDVKV---PVENVLGEIGK 253

Query: 313 --KILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI   +           +V   +  L E+  YA +R      +     +K+ +A +A 
Sbjct: 254 GHKIAFNVLNIGRYKLGAAAVGAAKEVLKESAKYALQRQQFNLPIAKFGAIKQKLARMAA 313

Query: 365 DIAAATALSFRLANSFD-EAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAME 417
            I AA + ++R     D E ++R ++        YA I A I K    ++    + E ++
Sbjct: 314 LIYAAESATYRTVGLIDDEIEARGKDQIVDAIEEYA-IEASIIKVLGSEVLDYAVDEGVQ 372

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GYIEE  + R YR+S  N I  G+
Sbjct: 373 IHGGYGYIEEYMVERAYRDSRINRIFEGT 401


>gi|297180741|gb|ADI16949.1| acyl-CoA dehydrogenases [uncultured SAR406 cluster bacterium
           HF0010_18O13]
          Length = 632

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 43/311 (13%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
            K W P I S E             +A   GLTE   G+D     + G    DG  Y ++
Sbjct: 167 KKKWLPGICSGE------------KIA-AFGLTEPEAGSDATNSKTTGVLSDDGKHYIVN 213

Query: 230 GHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+S+   +D FI+  +++G+    +V    E G+P G    + + K+G   ++TV 
Sbjct: 214 GQKIFISNGAWADTFIVALKIDGKFSSIVV----EKGTP-GFDIGKEEKKMGMEGSSTVP 268

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F++       LLG +    GP      +        ++ GM + +  A+ YA+ R   
Sbjct: 269 LYFTDCKVPVENLLGKVGDGAGPAFCGLNIGRFKLGASAIGGMMLGMQHAVEYAKSRKAF 328

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR-------- 394
           G  + D   ++  +A  A+      +  + +     EA +   +++   Y +        
Sbjct: 329 GQSISDFGSIQDKLATSAILTYTLDSTCYSVIGKQTEAINELDKNDPEYYVKQGNTTEQY 388

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS------- 446
                I K +  + A  +I    +  GG G+IEE  +A+ YR++  N I  G+       
Sbjct: 389 IAENSIVKVYGSEAAEELIDHCFQIYGGYGFIEEYPMAQAYRDNRINKIWEGTNEINRML 448

Query: 447 -GNAMVLDVLN 456
            G AM+   L+
Sbjct: 449 CGRAMITKALS 459


>gi|289739515|gb|ADD18505.1| isovaleryl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 423

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 29/261 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCF 256
           GL ++E   G+D+ ++  + ++  D  + L+G K W  +  ++D  I+ A+   G     
Sbjct: 162 GLAMSEPGAGSDVVSMKLKAERKGD-YFVLNGTKFWITNGSVADTLIVYAKTGTGTADKH 220

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMK 313
            +   + + +  G    +  +K+G R + T EL F         DL V    +   E+  
Sbjct: 221 SITAFIIETASEGFSIAQKLDKLGMRGSPTCELVFQ--------DLKVPAKNILGQENKG 272

Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + + +          A   V  M+ ++  A  YA +R   G ++ +  +M+  +AD+   
Sbjct: 273 VYVLMSGLDIERLVLAAGPVGLMQAAIDIAFEYAHQRKQKGQLIGEFQLMQGKMADMYTT 332

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++A  +  + +A + D   + S++ A   +       +C + A  V  EA++ +GG+GYI
Sbjct: 333 LSACRSYLYSVARACDSGHNSSKDCAGVIL-------YCAEKATQVALEAIQTLGGNGYI 385

Query: 426 EERSIARHYRESPANSILLGS 446
            E S  R  R++    I  G+
Sbjct: 386 NEYSTGRIMRDAKLYEIGAGT 406


>gi|324997990|ref|ZP_08119102.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 385

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 30/257 (11%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251
           V    GLTE   G+D +++ ++  +  D        ++  +SP++D  ++ A+ +    G
Sbjct: 116 VTASFGLTEADAGSDPSSLATRAVRDGDSWVINGSKRYITNSPVADVIMVFARTDPDAPG 175

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302
             G   FLVPR        GL       K+G     T       V + F N  G   G+ 
Sbjct: 176 NRGISTFLVPR-----DTPGLSVGPKDLKMGQFGAWTADVHLDDVRVPFENVVG---GEE 227

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIA 360
            +  G +   K L +    I +V  GM   L  E + YAR R   G  +    +++  +A
Sbjct: 228 GIDNGFLTAAKCLAHGRLHIGAVCVGMADRLVHETVEYARTREQGGKPIARFQLVQGLVA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   D  A   L    A SFD+        A A       KY+C +M   V   A++  G
Sbjct: 288 DSVTDARAGRGLVLDAARSFDDGTDMVSGPAAA-------KYFCSEMVGRVADRAVQVHG 340

Query: 421 GSGYIEERSIARHYRES 437
           G+GY+   ++ R +R++
Sbjct: 341 GAGYMRGVAVERFFRDA 357


>gi|163815116|ref|ZP_02206497.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759]
 gi|158449525|gb|EDP26520.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759]
          Length = 388

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 30/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252
            GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A     +  GR
Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIVEKRGR 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
               +   ++E G+P G  +   +NK+G   ++T EL F++       LLG         
Sbjct: 181 KMKEISAFIVEKGTP-GFTFGTKENKMGICGSSTYELIFTDCRIPKDALLGQKG------ 233

Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
           +   I ++ LD   + ++   + +AE      ++Y + R   G  +      +  +AD+A
Sbjct: 234 KGFNIAMHTLDGGRIGIAAQALGIAEGALETTVNYVKERKQFGRSIAQFQNTQFVLADLA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L ++ A   DE +S + + +Y+ + A + K +  ++A  V  + ++  GG G
Sbjct: 294 TKIEAAKLLVYKAARKKDEYQSGA-KVSYS-VEAAMAKLYAAEVAMEVTTKCVQLHGGYG 351

Query: 424 YIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLE 459
           YI+E  + R  R++    I  G+     MV+   NLL+
Sbjct: 352 YIKEYDVERMMRDAKITEIYEGTSEVQRMVISA-NLLK 388


>gi|23100465|ref|NP_693932.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778698|dbj|BAC14966.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 30/318 (9%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGT 209
           S  VT ++ ++L + P         IF    +   K  +Q+ +    LG   L+E   G+
Sbjct: 82  STGVTLSAHLSLASWP---------IFKYGTEDQKKNFLQRLATGEALGAYALSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ ++ +  ++  +  + ++G+K W  +  ++D +I+ A+ +       +   + +    
Sbjct: 133 DVVSMKTTARRDGED-FVINGNKVWITNGGVADIYIVFAKTDTDANHKGISAFIIEKGTE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G  + + + K+G RS+ T EL F N     +   N+     E  KI +  LD     ++ 
Sbjct: 192 GFRFGKKEKKLGIRSSPTTELIFENC---RIPKSNLLGNEGEGFKIAMTTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A  YA+ R   G  + +   +   +AD+A +I AA  L+++       
Sbjct: 249 QAVGIAQGALDAASDYAKERQQFGKPIAENQGISFKLADMATEIEAARLLTYQA------ 302

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A   S    Y +  A ++K +   +A     EA++  GG GY ++  + R+ R++    I
Sbjct: 303 AWLESAGLPYGKASA-MSKLFAGDVAMKSTVEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  ++ K
Sbjct: 362 YEGTNEVQRLVIGRMVTK 379


>gi|322692414|gb|EFY84327.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 433

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 30/295 (10%)

Query: 143 MAQLEAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           M+++E G    L   S   A  +    T    + W P +F+RE +               
Sbjct: 111 MSRVEGGVGIALAGASAIGAPPIVNCGTEEQKRKWLPGLFTRETN-------------FS 157

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           LG+TE  GG+D+A I +   K  DG  Y ++G  KW   +P +   +  A   GR G   
Sbjct: 158 LGITEPSGGSDVARIKTTADKTPDGSFYIVNGVKKWITGTPWA-THMTTAVRTGRPGMKG 216

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVED 311
           V  L+      G+ +Q+++N   N   A+      V++   N  G       +       
Sbjct: 217 VSLLVIPMDSPGIVHQKIQNSGQNAGGASFVYLENVKVPVENLLGGENQGFMIIMKNFNK 276

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + L+ +     +    R  LA +  YA RR   G  LI+  V++R ++++A  I A  A
Sbjct: 277 ERFLLTVGCNRKA----RSCLAMSFQYAMRRETFGKPLIENQVIRRKLSEMAHRIEAHWA 332

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              +LA     +    E+   A  +A + K    ++      EA +  GG+GY++
Sbjct: 333 WLEQLAYHIKCSDLGWEDPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYMK 386


>gi|218263057|ref|ZP_03477302.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222990|gb|EEC95640.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii
           DSM 18315]
          Length = 568

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWLLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L
Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457


>gi|163794410|ref|ZP_02188381.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium
           BAL199]
 gi|159180134|gb|EDP64657.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium
           BAL199]
          Length = 601

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 36/304 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           APM        + L+E   G+ ++ + +  + +    Y + G K + S    +       
Sbjct: 151 APMLDGRFFGTMALSEPHAGSSLSDVRTSARPLGGERYAIKGSKMWTSGGEHELTRNIVH 210

Query: 244 IMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           + LA++EG       +  F+VPR       E  +PN +    L +K+G R      L F 
Sbjct: 211 MTLARIEGAPAGVKGLSLFIVPRYRLDEAGEPAAPNDITLIGLNHKMGYRGTVNTALAFG 270

Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
              +  G+L+G+ N     +  M    ++ + + + +++  G  VSL  A    + RH  
Sbjct: 271 ENDDCVGWLVGEPNRGLAQMFHMMNEARVGVAMGAIMLAYQGYLVSLDYARTRPQGRHPG 330

Query: 346 GG-------ILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                     LI+   ++R      A+A+  L +A   A+     +   +   R  E   
Sbjct: 331 DKDPTTPQLALIEHADVRRMLLQQKAVAEGGLMLALDLAMRIDRQHQDPDETVRRRETLL 390

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              + PI K W    A    + A++ +GG GY  +  + R YR++  N I  G+     +
Sbjct: 391 LDFLTPIIKAWFTDRALEANSNAIQVLGGYGYTRDYPVERIYRDNRLNPIHEGANAIQAI 450

Query: 453 DVLN 456
           D+L 
Sbjct: 451 DLLG 454


>gi|212540746|ref|XP_002150528.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210067827|gb|EEA21919.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 541

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 27/270 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   +D F +  +  G  G 
Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWADYFTVAVRTGGE-GM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +T    G L+G  N      +  
Sbjct: 324 NGISVLLVERENGGVSTRRMDCQ-GVWSSGTTYITFEDTKVPVGNLIGKEN------QGF 376

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I S+   RV   E++ YA +R   G  LID PV++  +AD+A  I
Sbjct: 377 KVIMTNFNHERIGIIIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMKLADMARQI 436

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGY 424
            AA      L N   +A+S  +  A  ++   I   K    K       EA +  GG  Y
Sbjct: 437 EAAYNW---LENVVYQAQSMEDTEAMLKMGGAIAGLKAQSTKTFEFCAREASQIFGGLSY 493

Query: 425 I---EERSIARHYRESPANSILLGSGNAMV 451
               +   I R YR+  A +I  GS   M+
Sbjct: 494 SRGGQGGKIERLYRDVRAYAIPGGSEEIML 523


>gi|120613001|ref|YP_972679.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120591465|gb|ABM34905.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D  Y + G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVIAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296
             R      +  FLVP         G    RL++K+G RS+ T ++ F        N  G
Sbjct: 170 TDRAAGKRGMSAFLVPT-----DTPGYVVARLEDKLGQRSSDTAQIMFEGCRIPVENRIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I   S  M+ S   V    A+ YA+ R   G  +     + 
Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDV----AVQYAKERESFGQPIFQHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A  + AA  L +  A   D  +   +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADCATQLEAARQLIWHAATLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +G  G + +  + R YR+     I  G+ +
Sbjct: 334 QTLGWYGVVNDFPVERIYRDVRVCQIYEGTSD 365


>gi|27378410|ref|NP_769939.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351558|dbj|BAC48564.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 47/305 (15%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           HK   PKI S +  P                ++E   G+D+A I +   + S+G + L+G
Sbjct: 105 HKALIPKILSGDIIPAT-------------AVSEPDHGSDVAGIRTHAVRESNG-WRLNG 150

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W     ++D  ++ A+     G   +  LL DG+  G+   + +  +G       ++
Sbjct: 151 TKAWVTLGGVADRIMVFARTGSEAGHRSISCLLVDGALPGIARGKNEELLGMHGLDDCQI 210

Query: 290 EFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            FS+               F   + + N S            L  A M++   + +  +A
Sbjct: 211 TFSDVRLPADSVMGPENQAFKMAMSNFNFSR-----------LMMASMALGMAQAAFEDA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YAR R   G  +I    ++  +AD++ DIAAA  L    A   D  +  ++EAA A  
Sbjct: 260 TAYARDRKQFGQAIIGFQAVQFMLADMSTDIAAARLLIHHAARLHDAGEPIAKEAAQA-- 317

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +   MA   ++ A++  GG+GY  E  I R +R+     I  G+     L + 
Sbjct: 318 -----KLFTTDMAMKHVSNALQIHGGNGYSREYRIERLFRDVRLAQIYEGTNQIQRLIIA 372

Query: 456 NLLEK 460
             +EK
Sbjct: 373 RQVEK 377


>gi|319648125|ref|ZP_08002342.1| AcdA protein [Bacillus sp. BT1B_CT2]
 gi|317389760|gb|EFV70570.1| AcdA protein [Bacillus sp. BT1B_CT2]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 28/283 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247
           PM +       GLTE   G+D   + +  +K  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMARGEKIGAYGLTEPGSGSDAGGMKTTAEKKGD-EYILNGTKIFITNGGIADFYIVFAN 171

Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               Q       F+V +        G    + + K+G RS+ T E+ F +    L   L 
Sbjct: 172 LAPEQKHKGTTAFIVEKDF-----PGFSVGKKERKLGIRSSPTTEIIFQDCRVPLKNRLG 226

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
              G  E  KI +  LD     ++   V +A+     A  YA+ R   G  + +Q  +  
Sbjct: 227 ---GEGEGFKIAMKTLDGGRNGIAAQAVGIAQGAFEAARAYAKERKQFGRPIAEQQGIAF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A +I A+  L+++ A         SE   Y +  A ++K +    A  V  EA++
Sbjct: 284 KLADMATEIEASRLLTYQAAWL------ESEGLPYGKASA-MSKLYAGDTAMKVTTEAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 337 IFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQKLVISRMLMK 379


>gi|315443171|ref|YP_004076050.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315261474|gb|ADT98215.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 57/306 (18%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +T     K W P I S E               I + +TE   G+D+A I +   +  D 
Sbjct: 102 LTNDEQKKRWLPGITSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + ++G K F+SS ++ D  +++A+ +   G      F+V R +E     G    R  +K
Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERDME-----GFSRGRKLDK 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329
           +G  S  T EL F N       LLG         ++  P E + I      AI +++G R
Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAK 384
               E + Y++ R   G     QP+      +  +A++  ++        R      + +
Sbjct: 257 AVFDETLQYSKDRKAFG-----QPIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGE 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EAA A       K+W  ++A  V+ + ++  GG GY+ E  +AR Y +    +I  
Sbjct: 312 LTAVEAAKA-------KWWATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFG 364

Query: 445 GSGNAM 450
           G+   M
Sbjct: 365 GTTEIM 370


>gi|170087346|ref|XP_001874896.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82]
 gi|164650096|gb|EDR14337.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82]
          Length = 420

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 19/259 (7%)

Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
           V +G L ++E   G+D+ ++  + +K++ G + L+G+K W  + P++   ++ A+     
Sbjct: 155 VKVGSLAMSETGSGSDVVSMKLKAKKVAGG-WSLTGNKFWITNGPVASTLVVYAKTSPEK 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G   +   + +   +G       +K G R + T EL F +    ++ D N+     +   
Sbjct: 214 GSKGITAFIVENIFDGFSTSPKLDKFGMRGSDTCELVFDSC---VVPDSNILGKVDQGAG 270

Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           +L+  LD   + +SG  + L +A       +V      D+PV     M+  IAD+   + 
Sbjct: 271 VLMSGLDLERIVLSGGPLGLMQAAFDYAVEYVHDRKQFDKPVGTFQLMQAKIADMYTKLN 330

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ +  + +A + D+ K   ++ A A + +        + A  V  E M+C+GG+GYI +
Sbjct: 331 ASRSYVYAVAKACDQGKVSRKDCAGAILHS-------TEKAVEVALEGMQCLGGNGYIND 383

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R+S   ++  G+
Sbjct: 384 YPMGRIVRDSRLYTVGAGT 402


>gi|58332612|ref|NP_001011380.1| isovaleryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|56788857|gb|AAH88561.1| isovaleryl Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 419

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 47/299 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 143 EKYLPKLISGEY--------------IGALAMSEPNSGSDVVSMRLKAEKKGD-YYVLNG 187

Query: 231 HK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  ++  + +         +  FLV    E G P     Q+L +K+G R
Sbjct: 188 NKFWITNGPDADVLVVYVKTDPSAQPASHGITAFLV----EKGMPGFSTAQKL-DKLGMR 242

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336
            + T EL F +     + + NV     + + +L+  LD   + +SG     M+  L  AI
Sbjct: 243 GSNTCELVFEDC---KIPEQNVLGHLGKGVYVLMSGLDLERLVLSGGPLGIMQAVLDHAI 299

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   +AA     + +A + D+    S++ A   + 
Sbjct: 300 PYLHTREAFGQKIGHFQLMQGKMADMYTRLAACRQYVYNVAKACDQGHFNSKDCAGVIL- 358

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 +  + A  V  + ++C+GG+GYI +  + R  R++    I  G+G + V  +L
Sbjct: 359 ------YSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEI--GAGTSEVRRML 409


>gi|169826558|ref|YP_001696716.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168991046|gb|ACA38586.1| Acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 378

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 27/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247
           PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTYIVFAV 171

Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              + +     F+V    E     G    + + K+G RS+ T E+ F N     +   N+
Sbjct: 172 TDPEAKNGTSAFIVEAGFE-----GFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENL 223

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
                E  KI +  LD     ++   V +A+     A+ YA+ R   G  +     +   
Sbjct: 224 LGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGVSFK 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I A+  L+++ A          + +A A++MA  T       A +V  EA++ 
Sbjct: 284 LADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAGDT-------AMSVTTEAVQV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378


>gi|168179152|ref|ZP_02613816.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916]
 gi|226950627|ref|YP_002805718.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto]
 gi|182669955|gb|EDT81931.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916]
 gi|226841457|gb|ACO84123.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 26/270 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSIAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   +LE G P G    + ++K+G R+++T EL F +       LLG      G    MK
Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L   D   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + A
Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A      K+ + +AA A++ A  T  +       V  ++++ +GG GY ++ 
Sbjct: 295 AKYLVYKSAWKKSAGKNYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + + N L
Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377


>gi|121608311|ref|YP_996118.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552951|gb|ABM57100.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 396

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 30/289 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + P++ S E+              +G L ++E   G+D+ ++  + +    G 
Sbjct: 112 SPEQKRKYLPRLISGEH--------------VGALAMSESGAGSDVISMQLRAED-KGGY 156

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L G K W  + P +D  ++ A+     G   +   L+E G P   C QRL +K+G R 
Sbjct: 157 YLLDGSKMWITNGPDADILVVYARTGPGTGSQGITAFLIEKGMPGFGCAQRL-DKLGMRG 215

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337
           + T EL F    G  +    V  G  +  K+L+  LD     ++G     M+  L   + 
Sbjct: 216 SPTGELVFD---GVQVPAAQVLGGLDQGAKVLMSGLDYERAVLTGGPLGIMQSVLDHVLP 272

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + A  A ++ +A + D   +           +
Sbjct: 273 YIHERQQFGQSIGQFQLIQAKVADMYTTLQAGRAFAYTVAKNLDLLGTGHVRQVRKDCAS 332

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            I   WC + A  +  E ++  GG+GYI +  + R +R++    I  G+
Sbjct: 333 AI--LWCAEKATWMAGEGLQIHGGNGYINDYPLGRLWRDAKLYEIGAGT 379


>gi|70607943|ref|YP_256813.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68568591|gb|AAY81520.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 374

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 40/267 (14%)

Query: 184 DPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241
           DP ++  M      IG   LTE  GG+D+ ++ +  ++  +G + +SG K W      +D
Sbjct: 101 DPISRGKM------IGSFALTEPTGGSDVGSMKTYAER-RNGEWVISGRKMWITQGIYAD 153

Query: 242 AFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFG- 296
            FI +A+   R G    FL+PR          C +  K ++ GNR   T E+ F      
Sbjct: 154 LFITVARTGSRRGELSVFLLPR--------SNCIESRKIEVMGNRGTGTSEVVFRECKAD 205

Query: 297 --FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349
              ++G++N     V  +     L+   +++SG+ + LAE     A+ +A  R   G  L
Sbjct: 206 ESQVVGEINRGWDMVNTV-----LEVGRLAISGISIGLAESALQEALSWALNREAFGSKL 260

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +K  IAD    + +  +    ++  F+E  + + +  YA ++    K    ++A 
Sbjct: 261 YSFQGIKWYIADSITKLTSVKSFMKEVSKKFEE--NSNTKGVYASML----KLLSGEVAN 314

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRE 436
            V+  +++  GG GY +   I R YR+
Sbjct: 315 QVVDLSLQIFGGMGYAKGTKIERIYRD 341


>gi|326575348|gb|EGE25276.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis CO72]
          Length = 608

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 52/331 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++     DG Y ++G K F+S+   D       I+LA++       
Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G  N  
Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +     +  L +AI  ++   ++   ++ YA+ R            + S   +I  P
Sbjct: 284 LNAMFTFVNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406
            ++  +           AL + L+  F +  ++ E   E  +A     ++ PI K +  +
Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTE 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                    ++  GG GYI E  + ++ R++  + +  G+     LD+L           
Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497
                  + LGS G+ +    +     C+E+
Sbjct: 453 ------RKVLGSQGRMLANFTKIIHQFCQEN 477


>gi|304312807|ref|YP_003812405.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798540|emb|CBL46770.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 390

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 22/240 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D A + +  + +  G Y L+G K W  ++P++D  I+ A++EG++  F  
Sbjct: 135 FALTEPNHGSDPAGMKTNAKAVPGG-YELTGSKLWITNAPIADVMIVWARLEGKLAGF-- 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             LLE   P GL    ++ K+  R++ T  L F + F      L ++ G          L
Sbjct: 192 --LLEKNMP-GLSAHTIEGKLSLRASITGGLSFDSVFVPEAQRLPLAAGLAAPFAC---L 245

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALS 373
           + A   ++   +  AEA  +A R +V      G  L    ++++ +AD+  +IA     +
Sbjct: 246 NKARFGIAFGSLGAAEACWHAARDYVCLREQFGKPLAANQLIQKKLADMQTEIALGLNAA 305

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+    D+    SE       +  + K   C  +  +  EA + +G +G  +E  I RH
Sbjct: 306 LRMGRLMDDDACPSE-------LISLMKRNNCGKSLQIAREARDMLGANGISDEYPIMRH 358


>gi|183222229|ref|YP_001840225.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912282|ref|YP_001963837.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776958|gb|ABZ95259.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780651|gb|ABZ98949.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 388

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 41/264 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           L+E   G+D+  +T++ +K  D        +W   +  + AF + A  +   G     CF
Sbjct: 126 LSEPGAGSDVPGMTTRAEKKGDKWIINGAKQWITGASDAQAFTVFAYTDKNRGTRGVSCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
            VPR     S  GL   + ++K+G R+++T ++ F +               F + L  L
Sbjct: 186 YVPR-----SAKGLTVGKKEDKLGIRASSTHQVIFEDCEVGEDALVGKENLGFVYALQTL 240

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N S   V           A+M V   + +L  A  YAR R   G  +     ++  +AD+
Sbjct: 241 NASRPFV-----------AVMGVGVAQAALDHAARYAREREQFGVKIGTFQAVQHMLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++ +  A  ++++ A   D       +       + I K +  + A     +A++  GG 
Sbjct: 290 SIKVETAREITYKAARLSDANDPNLPK------YSAIAKAYASECAVQCATDAVQIFGGY 343

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY +E  + +  R+S   +I  G+
Sbjct: 344 GYTKEYPVEKLMRDSKILTIFEGT 367


>gi|291009013|ref|ZP_06566986.1| acyl-CoA dehydrogenase domain-containing protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 360

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 25/258 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG-- 254
           G  L+E   G+D AA++++  +  D         W     ++D + ++A+   +G  G  
Sbjct: 103 GYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGGVADFYTLMARTSDDGPRGIS 162

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           C LV     DG+  GL     ++K+G   + T EL F    G  +    +     + +KI
Sbjct: 163 CLLV-----DGTTPGLSAGTPEHKMGLTGSPTTELRFD---GARVPAERLVGAEGDGLKI 214

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LDS  + ++   V LA+     A+ YA++R   G  +I+   ++  +AD+A  + +
Sbjct: 215 ALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEFQGLEFLLADMAAVVHS 274

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A       A   D A+ R     +  + A + K      A  V  +A++ +GG GY  + 
Sbjct: 275 AR------ATYLDGARRRDAGMPFG-MQASVAKLVATDAAMKVTTDAVQVLGGVGYTRDF 327

Query: 429 SIARHYRESPANSILLGS 446
              R+ RE+    I  G+
Sbjct: 328 PAERYMREAKVLQIFEGT 345


>gi|259419424|ref|ZP_05743340.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
 gi|259344665|gb|EEW56552.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
          Length = 391

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 38/261 (14%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
           + +   LTE   G+D A++ ++  K  D  Y L+G K F+++   + AF ++A+  G  G
Sbjct: 118 ITVSFALTEPEVGSDAASLKTRAVKDGD-FYVLNGTKRFITNANRAGAFTLMART-GEAG 175

Query: 255 C-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302
                 F+VP  L     +GL   +   K+G R   T       V +   N  G + G  
Sbjct: 176 ARGISAFVVPAGL-----DGLTIGKHDKKMGQRGTRTADVILEDVRVPAENIIGGIPG-- 228

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
               G    MK+L   D   + ++     +A+     A+ YA  R   G  +    +++ 
Sbjct: 229 ---KGFYTAMKVL---DRGRLHIATQACGMADRLIRDAMAYALDRKQFGQPIASFQLIQG 282

Query: 358 AIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             AD   ++ AA ++  + A  +D   A SR++E + A   A  TK +C +M   V   A
Sbjct: 283 MFADSQAELYAAKSMLQKAATLYDTVPAGSRNDELSMA---AACTKMFCTEMVGRVADRA 339

Query: 416 MECIGGSGYIEERSIARHYRE 436
           ++  GG+GYI E  + R YR+
Sbjct: 340 VQIHGGAGYISEYKVERFYRD 360


>gi|328543424|ref|YP_004303533.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413169|gb|ADZ70232.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 390

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  I+ A+ + + G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKMWITNGPCADTLIVYAKTDPQAGPKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLIEKGFAGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGSVGKGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A  +V  M+ ++  AI Y   R   G  +    +++  IAD+ + + A+ A
Sbjct: 250 ERAVL----AAGAVGIMQAAMDVAIPYVHERQQFGQPIGTFQLVQGKIADMYVAMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A        + A  +  +A++ +GG+GYI +    
Sbjct: 306 YVYAVAQACDRGETTREDAAGAILYA-------AENATKIALDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|317123539|ref|YP_004097651.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587627|gb|ADU46924.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 383

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 40/283 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGR----V 253
            GLTE   G+D   + ++ ++  DG  Y ++G K F+++   +D  ++ A+  G     V
Sbjct: 123 FGLTEPDNGSDPGNLKTRARR--DGSDYVINGQKIFITNGTWADVCLVFARTGGDGPKGV 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GP 308
             FLVP      SP G   + +  K+G R  AT E+         L D+ V         
Sbjct: 181 SAFLVP----TDSP-GFEAREIHGKLGLRGQATAEI--------FLTDVRVPESARLGAE 227

Query: 309 VEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI ++ LD   +SV       ++  L E + Y   R   G  +    +++  IA+I
Sbjct: 228 GEGFKIAMHSLDKGRVSVGAGCTGIIQGCLEEVVKYTTERKQFGRPIASFQLIQEIIAEI 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++D+ AA  L++R A+  +  +    EA+ A       KY+  + A      A++  GG 
Sbjct: 288 SVDVDAARLLTWRAADLIERGEPFGVEASKA-------KYFASEAAVRAANGALQAFGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GY++E  I ++ R++   ++  G+     L ++   E G + F
Sbjct: 341 GYVDEYPIQKYMRDARVMTLYEGTSQIQKL-LIGRAETGISAF 382


>gi|11498891|ref|NP_070122.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304]
 gi|2649289|gb|AAB89955.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304]
          Length = 384

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 39/310 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+ +A  +A++  P V + +  +    +Y P    P+ +      + +TE   GTD+AA+
Sbjct: 84  SIGTAVDLAILGVPMVLR-YGSEEQKEKYIP----PVVQGKAPSAIAITEPDCGTDVAAM 138

Query: 215 TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA---QVEG---RVGCFLVPRLLEDGSP 267
            ++  K  +  + ++G K F+++  ++   I+LA   +VE     +  F+V    E    
Sbjct: 139 RTKAVKEGEE-WVINGSKTFITNGSVAGHTIVLAKTAEVEPPHRGISAFIVEPAWE---- 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G   +R++ K+G   + T E+   N       LLG+ N         +++ + + + + 
Sbjct: 194 -GYEARRIE-KMGLNCHDTAEITLKNVRVPAENLLGEENRGF-----YQLMEFFNESRVK 246

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++ + + +A      A+ YA++R   G  LI+   ++  +AD+  DI AA  L ++ A  
Sbjct: 247 IAALHLGMAVGAYERALEYAKQRKAFGKALIEHQAIQFKLADMWKDIEAARLLVYKAAWL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ K     ++ A++ A        + A  V  EA++  GG GY +E  I R+YR++  
Sbjct: 307 IDQGKPVPAISSAAKLFA-------SEAAVKVTYEALQVFGGYGYSKEYDIERYYRDARV 359

Query: 440 NSILLGSGNA 449
            +I  G+  A
Sbjct: 360 GTIYEGTSEA 369


>gi|330821061|ref|YP_004349923.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           gladioli BSR3]
 gi|327373056|gb|AEA64411.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           gladioli BSR3]
          Length = 615

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 54/332 (16%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+      P  KA   P++ +        TE R GTD+ A+  + + +   +Y L G 
Sbjct: 130 AIKLLQSSGTPAQKALIEPLRASRWDACFCATEPRAGTDLTAVGLRAEPLDQDVYTLRGE 189

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRL 275
           K F+S+ M +      + +L +VE        + CF+VPR   D +     PN +    L
Sbjct: 190 KVFISAGMHELTENTLYFVLGRVESSAPDSFSLSCFVVPRFWPDEASGELRPNHVECIGL 249

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             K+G +  A   L F     T G+LLG    +   V  ++++  ++ A MS     V +
Sbjct: 250 PRKMGLKGCANTHLVFGRGGATRGWLLG----ARRNVGLLQLIPLMNQARMSTGMFGVGV 305

Query: 333 AE-----AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFR 375
           A      A+ YARRR     I            +I+   ++R + D+   +     L  +
Sbjct: 306 ASNAYLHAVDYARRRRQGRPIEQASNTSAERVAIIEHADVQRMLIDMKSRLDGCRGLLGK 365

Query: 376 LANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           LA +       EA   ++ A   R      ++ PI K +    A  +   A++  GG GY
Sbjct: 366 LAATATQALVLEAAPDADPALIERRRKLQQMLTPICKAFISDQAWRICESAIQVHGGLGY 425

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +   + +  R+    SI  G+      D++ 
Sbjct: 426 TDASPVEQCARDVKVLSIWEGTNYIQAQDLVR 457


>gi|326484913|gb|EGE08923.1| glutaryl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 383

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 22/202 (10%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++   ++      G Y LSG K W  +SP+SDAF++ A+++G++  F
Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFYALSGTKTWITNSPISDAFLVWAKLDGKIRGF 225

Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           ++ R   D  P G L    +KNK   R++ T  ++  N       +  ++    GP    
Sbjct: 226 VLER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 278

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A D 
Sbjct: 279 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 336

Query: 367 AAATALSFRLANSFDEAKSRSE 388
           A  T  + ++A   DE K+  E
Sbjct: 337 AYGTLAAVQVARLKDEGKAVPE 358


>gi|228942489|ref|ZP_04105025.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975421|ref|ZP_04135976.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982056|ref|ZP_04142348.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228777594|gb|EEM25869.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228784215|gb|EEM32239.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817172|gb|EEM63261.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 EYPVERFFRDAKITQIYEGT 369


>gi|226287036|gb|EEH42549.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 434

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 145/346 (41%), Gaps = 53/346 (15%)

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
           HC  W +S E       H++R+  L   A          S    + ++L   P     + 
Sbjct: 110 HCVFWRKSAE-------HQVRSIGLSYAAH---------SQLCVNQLSLNGNPEQKAKFL 153

Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           P + S E               +G L ++E   G+D+ ++ +  + + DG Y L+G K W
Sbjct: 154 PSLISGE--------------KVGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMW 198

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F +
Sbjct: 199 ITNGPDADYIVVYAKTKPDAGSKGITAFVVEKTFKGFSCSRKLDKLGMRGSNTGELIFDD 258

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHV 344
            F     +LG++N        +K+L+    L+  ++S      M+ +L   + Y   R  
Sbjct: 259 VFVPQENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQ 312

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA----KSRSEEAAYARIMAPIT 400
               +    +++  +AD+   ++A+ A ++  A   D+A     +RS  A   +  A   
Sbjct: 313 FDAPIAHNQLIQGKLADMYTKLSASRAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAI 372

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            Y   + A     +A++ +GG+GY+ E    R  R++    I  G+
Sbjct: 373 LY-AAERATECALDAIQLMGGNGYVNEIPAGRLLRDAKLYEIGAGT 417


>gi|242800822|ref|XP_002483661.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218717006|gb|EED16427.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 547

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 27/270 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F +  +  G  G 
Sbjct: 271 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTVAVRTGGE-GM 329

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +T      L+G  N      +  
Sbjct: 330 NGISVLLVERENGGVSTRRMDCQ-GVWSSGTTYITFEDTKVPVENLIGKEN------QGF 382

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I S+   RV   E++ YA +R   G  LID PV++  +AD+A  I
Sbjct: 383 KVIMTNFNHERIGIVIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMKLADMARQI 442

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGY 424
            AA      L N   +A+S  E  A  ++   I   K    K       EA +  GG  Y
Sbjct: 443 EAAYNW---LENVVYQAQSMEETEAMLKMGGAIAGLKAQSTKTFEFCAREASQIFGGLSY 499

Query: 425 I---EERSIARHYRESPANSILLGSGNAMV 451
               +   I R YR+  A +I  GS   M+
Sbjct: 500 SRGGQGGKIERLYRDVRAYAIPGGSEEIML 529


>gi|87199662|ref|YP_496919.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135343|gb|ABD26085.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +   ++ G + L+G K W  +   +D  ++ A+     G   +
Sbjct: 129 LAMSEAGAGSDVVSMKLRADAVAGG-FRLNGTKFWITNGTYADTLVVYAKTSPEAGSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F + F       G L G + V    ++ 
Sbjct: 188 SAFLIEKDMPGFSIGQKIDKMGLRGSPTCELVFDDCFVPEENVMGPLHGGVGVLMSGLDY 247

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++    A M +  M+  L   I Y R R   G  +    +M+  +AD+ + I +A A
Sbjct: 248 ERVVL----AGMQIGIMQACLDTVIPYVRERKQFGQPIGTFQLMQAKVADMYVAIQSARA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++   +AA A ++A    +        V  EA++ +GG+GY ++  + 
Sbjct: 304 YVYAVAKACDAGQTTRFDAAGAILLASENAF-------RVSGEAVQALGGAGYTKDWPVE 356

Query: 432 RHYRESPANSILLGS 446
           R+ R++    I  G+
Sbjct: 357 RYLRDAKLLDIGAGT 371


>gi|30265366|ref|NP_847743.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530908|ref|YP_022257.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188177|ref|YP_031430.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|165871314|ref|ZP_02215963.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167635755|ref|ZP_02394065.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167640445|ref|ZP_02398709.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170688210|ref|ZP_02879421.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170708025|ref|ZP_02898473.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177651849|ref|ZP_02934432.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190569118|ref|ZP_03022017.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227818105|ref|YP_002818114.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229601004|ref|YP_002869557.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687216|ref|ZP_05151074.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254724697|ref|ZP_05186480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735271|ref|ZP_05192980.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254755812|ref|ZP_05207844.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254762152|ref|ZP_05213998.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30260044|gb|AAP29229.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47506056|gb|AAT34732.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182104|gb|AAT57480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164712981|gb|EDR18509.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167511665|gb|EDR87047.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167528864|gb|EDR91621.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170126998|gb|EDS95877.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170667903|gb|EDT18655.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082553|gb|EDT67617.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190559786|gb|EDV13772.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227006065|gb|ACP15808.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229265412|gb|ACQ47049.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  + +Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|84503054|ref|ZP_01001150.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84388598|gb|EAQ01470.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SDA++++A+   EG  G   +
Sbjct: 124 LTEPGSGSDAAALRTRAERTNEG-YRLNGTKAFISGGGYSDAYVVMARTGAEGPRGVSTL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              +EDG+  GL +  L+ K+G +S  T +++F N       D++ +    E+ K   Y 
Sbjct: 183 --YVEDGA-EGLSFGGLEQKMGWKSQPTRQVQFDNC------DVSAANLIGEEGKGFTYA 233

Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   +++S   +  A+      + Y   R   G  +     ++  +AD+ +++ AA
Sbjct: 234 MVGLDGGRLNISACSLGAAQTALDMTLAYMAERKAFGQPINQFQALQFRLADMEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D+       A  A     + K +  +    V+ + ++  GG GY+ +  
Sbjct: 294 RTFLRQAAWKLDQG------APDATKFCAMAKKFVTETGSKVVNQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           I +  R+   + IL G+   M L V
Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372


>gi|94968160|ref|YP_590208.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550210|gb|ABF40134.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 392

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 34/275 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+T++ +   D  Y ++G K W  ++  +  F++LA V+   G   +  
Sbjct: 136 LSEAGSGSDAFALTTRAEDKGDH-YVINGRKLWITNAKEAGLFVLLATVDPSAGYKGITA 194

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            L + S  G    + ++K+G R+++T EL        +L D  V   P E++        
Sbjct: 195 FLVEKSFEGFTVGKKEDKLGIRASSTCEL--------ILEDCKV---PKENVLGEVGKGY 243

Query: 313 KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI I  L+   + +    + LA      A  YA  R   G  L     ++  IA +A +I
Sbjct: 244 KIAIETLNEGRIGIGAQMLGLARGAWEHAAKYATERKQFGQALSSFQGIQFQIAQMATEI 303

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   + +  A   D   +  +EAA       +TK +  ++A  V + ++E  GG G+ +
Sbjct: 304 EAVRMMVYNAARMKDAGMNFVKEAA-------MTKLFASQVAERVASLSLEVYGGYGFTK 356

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +    +++R+S    I  G+ N  ++ +  ++  G
Sbjct: 357 DYPAEKYFRDSKIGKIYEGTSNMQLMTIAKMVMGG 391


>gi|326386146|ref|ZP_08207770.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209371|gb|EGD60164.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 573

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 61/352 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
           + LTE + G+D+ A+ S    I++G     Y + G K F++    D       ++LA+  
Sbjct: 161 MNLTEPQAGSDVGALRSTAAPITEGEHAGKYRVKGTKIFITWGEHDLAENIVHLVLARTP 220

Query: 251 GR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296
           G       +  F+VP+  +L DGS    N +    +++K+G  S+ T  + F +     G
Sbjct: 221 GAPAGTRGISLFIVPKYHVLADGSLGARNDVRCVSIEHKLGIHSSPTCVMSFGDHDECIG 280

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGG 347
            ++G      G ++ M     ++SA ++V    V ++EA     + YAR R      S G
Sbjct: 281 EMVG---AEFGGLKAM--FTMMNSARVNVGNQGVQISEAALQKALSYARDRIQSPRASSG 335

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITK 401
                 +I+ P ++R I  +      A  L +  A   D       +A   A ++ P+ K
Sbjct: 336 DKTPVAIIEHPDVRRTIMRMRALTEGARGLLYYTAGQIDRGTLGDTDAQKRAEVLVPLLK 395

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            W       V    ++  GG G+IEE   A+ YR++    I  G+      D +      
Sbjct: 396 AWGTDTGCEVATLGVQVHGGMGFIEETGAAQFYRDARIAPIYEGTNGIQAADFVT----- 450

Query: 462 TNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
                       + LG  +G  V  +L D ++ C E   LA    + +A+A+
Sbjct: 451 ------------RKLGYDNGDVVKALLEDIVADCAESPELASLARDALAIAA 490


>gi|323358382|ref|YP_004224778.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323274753|dbj|BAJ74898.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 389

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 18/258 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AAIT+   +  D  Y L+G K F+S     +  ++    G  G   +   
Sbjct: 134 LTEPGAGSDAAAITTSAIRHGD-TYVLTGVKQFISGAGEASVYVVMARTGEPGARGISAF 192

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L      GL +  L+ K+G  +  T       V +   N  G      +++   +   + 
Sbjct: 193 LVPADAEGLSFGPLEKKMGWNAQPTRQVILDEVRVPAENLLGGEGRGFSIAMTALNGGR- 251

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G R +L  AI Y   R   G  L ++  +  A+AD+A ++ AA  L  
Sbjct: 252 ---LNIATCSIGGARWALDRAIAYVHERFTFGEALAEKQSVVFAVADMATELEAARLLVR 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A + D   ++  + A    MA   K +   +   V  EA++  GG GY+++  I +  
Sbjct: 309 EAATALD---AKDPDTATRCAMA---KRFATDVGFRVANEALQLHGGYGYLQDYGIEKVV 362

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + IL G+   M L
Sbjct: 363 RDLRVHQILEGTNEIMRL 380


>gi|15806274|ref|NP_294979.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459002|gb|AAF10828.1|AE001973_1 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 37/261 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++  + ++  D  + L+G K W  S   +D F+++A+  G     V CF
Sbjct: 130 LTEAHAGSDAASLRLKAERDGDD-WVLNGAKAWITSGNHADTFLVMARTGGPGARGVSCF 188

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +V R    G+P GL   + ++K+G  +  T  + F N       L+G+        E   
Sbjct: 189 IVER----GTP-GLSSGKPEHKMGQHAAQTTTVSFDNVRVPHANLVGE--------EGQG 235

Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           ++I L S         ++ +   R +L  A  YA  R   G  + +   +   IA +A  
Sbjct: 236 LIIALSSLDSGRIGIGMLGLGIARSALEHAAAYANEREQFGKKIREFEGVSFKIARMAAR 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I +A  +  + A   D+ +  S+EA+ A+++         + A  V  +A++  GG+GY 
Sbjct: 296 IESARLVGLKAAWLKDQGQPFSKEASIAKLLG-------SEAAVDVTRDAVQIFGGNGYS 348

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + + YR++    I  G+
Sbjct: 349 AEYPVEKLYRDAKITEIYEGT 369


>gi|331700302|ref|YP_004336541.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954991|gb|AEA28688.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 619

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 66/405 (16%)

Query: 99  FHPAWHAL-LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           F PA H++ L +S+ D     +WD  +              RL L A+L  G+ + PSV 
Sbjct: 80  FDPATHSVTLPQSLKDAYKV-LWDGEW-------------WRLSLPAEL-GGYGIPPSVQ 124

Query: 158 -SASMVALMTTPRVHKDWA-PKIFSREYDPTNKAPMQKTSVAIGLG------LTEKRGGT 209
            +A+ + L + P      A P   S  +            + IG G      LTE   G+
Sbjct: 125 WAAAELILGSNPVAFMYMAGPNFASILHRNGTDEQKHWAELMIGRGWGATMVLTEPDAGS 184

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+ A  ++  + +DG + + G K F++S   D       ++LA+ EG       +  FLV
Sbjct: 185 DVGAGRTKAIQQADGTWHIEGVKRFITSAEQDMTENIMHLVLARPEGAKAGTKGLSLFLV 244

Query: 259 PRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308
           P+        E G  NG     +++K+G + + T EL F        G+LLGD  V  G 
Sbjct: 245 PKFHFDSQTGEPGERNGAFVTGVEHKMGLKGSTTCELTFGQHGVPAVGWLLGD--VHDGI 302

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------------QP 353
            +  +++ Y  +     ++  +      A+ YA+ R V G  L                P
Sbjct: 303 AQMFQVIEYARMMVGTKAIGTLSAGYLAALEYAKER-VQGADLTQMLDKTAPRVTITHHP 361

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---MAPITKYWCCKMAPA 410
            ++R +           AL    A   D  ++  + A   ++   + P+ K    + A  
Sbjct: 362 DVRRILMLQKAYAEGLRALYTYTATYQDRIRAGGDTALAEKVNDLLLPVVKGVGSERASE 421

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           ++  +++ +GGSGY+++  I ++ R++  +S+  G+     LD++
Sbjct: 422 MLLLSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGTTAIQSLDLV 466


>gi|326943140|gb|AEA19036.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 345 EYPVERFFRDAKITQIYEGT 364


>gi|302870352|ref|YP_003838989.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302573211|gb|ADL49413.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 35/278 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A I +   +  D  Y ++G K +++S +   F+  A      G   V 
Sbjct: 124 LAITEPDGGSDVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVCTEFPGSGSVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L+ D    G    R   K+G   + T EL F +    +   +    GP ED   L    
Sbjct: 183 LLVIDKGTPGFTVGRRLEKLGWHCSDTAELSFVD----VRVPVTNRVGP-EDTGFL---- 233

Query: 320 SAIMS-VSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            AIM   +  R+SLA             A+ + R R   G  L+ + V++  +A++    
Sbjct: 234 -AIMQQFANERLSLATQAYATAQRCVDLAVQWCRDRQTFGRPLVGRQVVRHKLAEMHSRT 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A    +A      +    E A A+ +A  T  W       V+  A++  GG GY+ 
Sbjct: 293 DAARAYVHDVAERVAAGQPVVTEVAMAKNVAVATCDW-------VVDAALQLHGGFGYMR 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +  + RHYR++     LLG G      +  ++ KG  L
Sbjct: 346 DAEVERHYRDAR----LLGIGGGTTEIMNEIIAKGMGL 379


>gi|221103162|ref|XP_002163311.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, short/branched
           chain [Hydra magnipapillata]
          Length = 418

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 43/292 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   TS+     L+E   G+D  A+ +  +++ D  Y ++ +K W  ++  +  F++ A 
Sbjct: 145 PKLATSMVGCFNLSEAGSGSDAFAMKATAKQVGDD-YIINANKLWISNAEHAGLFLVFAN 203

Query: 249 VE------------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
            +              + CFLVP+        GL   + ++K+G R+++T  +++++   
Sbjct: 204 AKPDLLNTNPSKAYKGITCFLVPK-----DTKGLVVGKKEDKLGIRASSTCPVDYTDVRV 258

Query: 295 -FGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
               +LG+L +     +E + I        + +    + LA+     A+ Y + R     
Sbjct: 259 PKSSILGELGLGYKYAIECLNI------GRIGIGAQMIGLAQGAMDIAVPYTKERQQFNK 312

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCK 406
            + D   ++  I+D+A  + AA  L +  A        R +EA    +M A + KY+  +
Sbjct: 313 KIFDFQGLQHQISDVATKLEAARLLVYNAA--------RLKEANKDFVMQAAMAKYYSSE 364

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A    ++ +E +GG G+ +E  I + YR+     I  G+ N  +  +  LL
Sbjct: 365 VATLATSKCIEWMGGVGFSKEYPIEKFYRDCKIGCIYEGTSNIQLNTIAKLL 416


>gi|120405539|ref|YP_955368.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958357|gb|ABM15362.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 47/301 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +T     K W P I S E               I + +TE   G+D+A I +   +  D 
Sbjct: 102 LTNDEQKKRWLPGIASGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + ++G K F+SS ++ D  +++A+ +   G      F+V R +E     G    R  +K
Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERGME-----GFTRGRKLDK 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329
           +G  S  T EL F N       LLG         ++  P E + I      AI +++G R
Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E + YA+ R   G  +      +  +A++  ++        R      + +  + E
Sbjct: 257 AVFQETLQYAKDRKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVDGELTAVE 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K+W  + A  V+ + ++  GG GY+ E  +AR Y +    +I  G+   
Sbjct: 317 AAKA-------KWWATETAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEI 369

Query: 450 M 450
           M
Sbjct: 370 M 370


>gi|67537036|ref|XP_662292.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4]
 gi|40741540|gb|EAA60730.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4]
 gi|259482476|tpe|CBF76996.1| TPA: Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10)
           [Source:UniProtKB/TrEMBL;Acc:Q6T5L6] [Aspergillus
           nidulans FGSC A4]
          Length = 431

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 27/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  +++ DG + L+G K W  +
Sbjct: 143 NGTPEQKARFLPGLLSGEKIGALAMSEHSAGSDVVSMKTSAKEV-DGGWVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               LLG++N        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 262 PRENLLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGA 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D   S    A   +  A    Y   + 
Sbjct: 316 PIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASLGSAAIRTQDCAGAILY-AAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|262067060|ref|ZP_06026672.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291379227|gb|EFE86745.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 39/292 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++   +  +I+ A  +   G   +   ++E G+P G    + + K+G R +AT EL
Sbjct: 156 KIFITNAGYAHVYIVFAMTDKSKGLKGISAFIVESGTP-GFSIGKKEMKLGIRGSATCEL 214

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334
            F N       LLGD        +  KI      A+M++ G R+ +A            E
Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDE 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI+YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A+
Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|254481275|ref|ZP_05094520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038438|gb|EEB79100.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 378

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 123/285 (43%), Gaps = 19/285 (6%)

Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP I  F  E       P   T  A+G L +TE   G+D+  I +   +  D  + L+G 
Sbjct: 93  APYIEHFGTEEQKQQWLPKMVTGEAVGALAMTEPGAGSDVQGIRTSAVQDGDE-WVLNGS 151

Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++ + +D  I+ A  +   G       L D S  G    +   KIG  ++ T EL 
Sbjct: 152 KIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDASLPGFDKGKKIEKIGQHASDTAELF 211

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F +       LLGDLN   G V  MK L    L  A  +V+    +L   + Y + R   
Sbjct: 212 FQDVRLPANALLGDLN--KGFVIMMKELPRERLGIAAQAVAAAEGALQITVDYVQERKAF 269

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +      +  +AD+  +IA   A   + AN +  ++  +++AA       + KY   
Sbjct: 270 GQTVGSFQNTRFTLADVKTEIALNRAFYDQCANQYASSELSADDAA-------MLKYAAT 322

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +M    + + ++  GG GY  E  I+R+Y ++    I  G+   M
Sbjct: 323 EMQCKTVDQCLQLFGGYGYTAEYPISRYYTDARIQRIYGGTSEIM 367


>gi|126650984|ref|ZP_01723195.1| CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592185|gb|EAZ86234.1| CoA dehydrogenase [Bacillus sp. B14905]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 23/257 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K       GLTE   G+D A  T     I    Y ++G K ++++      I++  V
Sbjct: 113 PLAKGETLGSFGLTEPNAGSD-AGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAV 171

Query: 250 EGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
            G+   G  ++  ++   +  G+      +K+G R + T E+   N       LLGD   
Sbjct: 172 TGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRTNLLGDEKR 231

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                   + L  LD   +S++ + V +A+A     + +A+ R   G  +     ++  +
Sbjct: 232 GFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A++I  A  L  + A   D+ K   +EAA A++ A    +  C        +A++  
Sbjct: 287 ADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQIH 339

Query: 420 GGSGYIEERSIARHYRE 436
           GGSGY++E  + RH R+
Sbjct: 340 GGSGYMKEYDVERHLRD 356


>gi|56477494|ref|YP_159083.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum
           aromaticum EbN1]
 gi|56313537|emb|CAI08182.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum
           aromaticum EbN1]
          Length = 377

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----C 255
           LTE   G+D +A+ +   +  D  + ++G K F+++   +D  I+ A  +   G     C
Sbjct: 123 LTEPHVGSDASALKTTAVRDGDS-WVINGVKQFITTGREADVAIVFAVTDKTAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           FLVP      +  G    R++ K+G +++ T ++ F +       LLG       ++   
Sbjct: 182 FLVPT-----NTPGYIVARIEEKMGQKASDTAQILFEDCRVPADALLGAEGEGYRIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A   +   R +L  A+ YA  R   G  + +   +   +AD+A  + A
Sbjct: 237 LEAGRIGI----AAQCLGMARAALEAAVKYAHERETFGKPIFEHQAVNFRLADMATQLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  D  +   +EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 293 ARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAEKVCSDAIQVHGGYGYVTDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRVCQIYEGASD 365


>gi|239813462|ref|YP_002942372.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239800039|gb|ACS17106.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 385

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 34/268 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC--- 255
           + ++E   G+D+ A+ +   + +DG Y L+G K F+++   +D  I++A+ +   G    
Sbjct: 124 IAMSEPGAGSDLQAVKTSAIRQADGSYLLNGSKTFITNGWHADLVIVVAKTDPAAGAKGT 183

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-LNVSTGPV 309
             FLV R    G P     +RLK K+G ++  T EL F++       LLGD   ++ G V
Sbjct: 184 SLFLVER----GMPGFEKGKRLK-KLGLKAQDTSELFFTDVRLPADALLGDAAQLNRGFV 238

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+ L +  L  AI +V+  + ++ + + Y + R V G  +      +  +A++  ++ 
Sbjct: 239 CLMEQLPWERLQIAISAVAASQAAIDQTVTYVKERKVFGQPVGSYQNTRYTLAELQTEVQ 298

Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A       +   +A   D A             A + KYW   +   V+   ++  GG 
Sbjct: 299 VAQVFVDKCIELLMAEKLDTA------------TASMAKYWTTDLQCKVMDACVQLHGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G++ E  I R Y ++    I  G+   M
Sbjct: 347 GFMWEYPITRAYADARVQRIYGGTNEIM 374


>gi|126642194|ref|YP_001085178.1| putative acyl CoA dehydrogenase oxidoreductase protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 330

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 75  LTEPHVGSDASAILCKAERDGDH-WILNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 133

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 134 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 188

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 189 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 244

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 245 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 297

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 298 PVERIYRDVRVSQIYEGASD 317


>gi|114763488|ref|ZP_01442893.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114543768|gb|EAU46780.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 523

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGC--- 255
           LTE   G+D++AI ++  +  +  + + G K F+S     M+D  + L  V  R G    
Sbjct: 158 LTEPGAGSDLSAIRTKATRDGES-WRIEGEKIFISGGDQDMTDNILHL--VLARTGAPED 214

Query: 256 -------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                  F  P + EDG  N +   R++ K+G  ++ T +L F    G L+G        
Sbjct: 215 GIRGLSLFACPAIREDGVRNAVTVTRIEEKLGLHASPTCQLAFDGAQGELVGAEGAGLKA 274

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----LIDQ-PVMKRAIADI 362
           +  M     LD  +  V+    +   A+HYA  R    G       IDQ P + R I   
Sbjct: 275 MFAMMNHARLDVGLQGVAHAARAADLALHYAAERKQGRGADGTVASIDQHPDVARMI--- 331

Query: 363 ALDIAAATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             D   A AL  R L +    A+    E  +   M P+ KY+C +        A++ +GG
Sbjct: 332 --DECDALALGGRALCHITLVAQELGTEPDFVEFMTPVCKYFCTEAGSRAADLAIQVMGG 389

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY+ E    +++R++   +I  G+
Sbjct: 390 YGYLREYGAEQNWRDNRICAIYEGT 414


>gi|86158072|ref|YP_464857.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774583|gb|ABC81420.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D +A+ +   +  DG + LSG K F++   +  +F++LA+ + GR    +  
Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDG-WVLSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +LE G   G   + +  K+G RS+ T +L   E        LGD  V  G ++ ++IL 
Sbjct: 184 FILEPGM-KGFSQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGD--VDRGFIDTLQILD 240

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +    ++V   R +L E+  YAR R   G  + +   +   +AD+A ++ AA  L  
Sbjct: 241 RGRITIGALAVGLGRGALEESRAYARERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  +     A+ A       K +  + A    + A++  GG GY  +  + RH+
Sbjct: 301 RAAAMCDAGQPFGAAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353

Query: 435 RESPANSILLGSGNAMV 451
           R++    I  G G + V
Sbjct: 354 RDAKLTEI--GEGTSEV 368


>gi|319950404|ref|ZP_08024320.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319435920|gb|EFV91124.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 50/381 (13%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           GP  + WD+    P    +LR +   G+  +I+    E V      ++   R++   QL 
Sbjct: 24  GPMAQEWDETHHFP--KDVLREAAGMGMG-AIY--VSEDVGGSGMRRLDGVRIF--EQLA 76

Query: 148 AGHLMSPSVTS--------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            G    PSV +          MV    T    ++W P++ S E   +             
Sbjct: 77  RG---CPSVAAYLSIHNMCVWMVDEFGTDEQRQEWIPRLASMELFAS------------- 120

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D AA+ ++  +  D  Y L+G K F+S    SD ++++A+  G  G   +
Sbjct: 121 YCLTEPGAGSDAAALRTKAVRDGD-HYVLTGTKQFISGGGQSDVYLVMART-GDAGPKGI 178

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L      GL +   + K+G  +  T ++           L+G  + S G      I 
Sbjct: 179 SAFLVPADSEGLSFGADERKMGWNAQPTAQVIMEGVRVPAANLIGGAD-SGGEGLGFTIA 237

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       ++ A  S+ G + + A A+ + R R   GG LID+P ++  +A++A ++ A+
Sbjct: 238 MRGLNGGRINIAACSLGGAQEAYARAVAHVRDREAFGGALIDEPTIRFTLAELATELEAS 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +R A + D  +    E      +  + K +       +   +++  GG GY+ E  
Sbjct: 298 RLMLWRAAAALDAKEPDHVE------LCAMAKLFVTDRCFDIADRSLQLFGGYGYLSEYG 351

Query: 430 IARHYRESPANSILLGSGNAM 450
           I +  R+   + IL G+   M
Sbjct: 352 IEKIVRDLRVHRILEGTNEIM 372


>gi|254229382|ref|ZP_04922798.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|151938073|gb|EDN56915.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
          Length = 389

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 37/308 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   K + PK+            +  T V   L ++E   G+D+ ++  + +   D  +
Sbjct: 110 TPSQRKKYLPKL------------IDGTHVG-ALAMSEPNAGSDVISMQLKAENKGDH-F 155

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G+K W  + P +D  ++ A+ +   G   +   + + +  G  + +  +K+G R + 
Sbjct: 156 VLNGNKMWITNGPDADIVVLYAKTDVNAGSRGITAFIVERNVEGFSHAQKLDKLGMRGSN 215

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYA 339
           T EL F+N       +LG+LN     VE +   +  +  +++      M+  +   + Y 
Sbjct: 216 TCELVFNNCVVPKENILGELNQG---VEVLMSGLDYERVVLAAGPLGIMQACMDIVVPYV 272

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD+   ++AA A  + +A + D   +  ++AA A +    
Sbjct: 273 HEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAACDRGNATRKDAAGAIL---- 328

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  ++A  +  +A++ +GG+GYI E    R  R++    I  G+G + +  +L    
Sbjct: 329 ---YSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLYEI--GAGTSEIRRML---- 379

Query: 460 KGTNLFEQ 467
            G  LFE+
Sbjct: 380 IGRELFEE 387


>gi|290958932|ref|YP_003490114.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260648458|emb|CBG71569.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 608

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGHGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+ L D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L D        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGTDLADFMDKAAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399
                 P ++R++           AL    A+  DE + +           A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIQVKEAAGEDFKALEALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  +     +A++++  GGSG+++E  I ++ R++  +++  G+
Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447


>gi|254722338|ref|ZP_05184126.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
          Length = 569

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  +   YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVEEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|65317320|ref|ZP_00390279.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  + +Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|256397917|ref|YP_003119481.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256364143|gb|ACU77640.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 609

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQADGSWHIDGVKRFITSGEHDLSENIIHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300
             +  F+VP+   D      G  NG     +++K+G +++ T E+ F        G+LLG
Sbjct: 224 KGLSLFIVPKYDFDWETGELGERNGAYVTNVEHKMGLKASTTCEVTFGQNGVPAKGWLLG 283

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348
           +++     +  +     +     ++S +      A+ YA++R V G              
Sbjct: 284 EVHDGIAQMFTIIEFARMMVGTKAISTLSTGYLNALEYAKQR-VQGSDLTVPGKDAPRVT 342

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLA---NSFDEAKSRSEEAAYAR----IMAPITK 401
           +   P ++R++      +    +L    A   ++ ++A++   E  +A     ++ PI K
Sbjct: 343 ITHHPDVRRSLMTQKAYVEGMRSLVLYTATHQDAIEQARAAGTEDKHAERMNDLLLPIVK 402

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  + +   +A+A++  GGSG+++E  + ++ R++  +S+  G+     LD+ 
Sbjct: 403 GYGSEKSYEQLAQALQIFGGSGFLQEYPLEQYIRDAKIDSLYEGTTAIQSLDLF 456


>gi|254488050|ref|ZP_05101255.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044919|gb|EEB85557.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + +DG Y L+G K F+S    SDA++ + +        +   
Sbjct: 137 LTEPGSGSDAAALKTKCDRTNDG-YILNGTKSFISGGGYSDAYVAMVRTSDNGSAGVSTV 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            +EDG+ +GL +  L++K+G RS  T +++F N     G L+G         E+ K   Y
Sbjct: 196 YVEDGT-DGLSFGGLEDKMGWRSQPTAQVQFDNCTIPAGNLVG---------EEGKGFKY 245

Query: 318 ---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  S+   + +L   + Y   R   G  +     ++  +AD+ +++ A
Sbjct: 246 AMMGLDGGRLNIAACSLGAAQTALTSTLDYMGDRKAFGQSIDQFQGLQWRLADMEIELQA 305

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A     + A   D        A  A     + K +  +    ++ + ++  GG GY+ + 
Sbjct: 306 ARTFLRQAAWKLDNG------APDATKFCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADY 359

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I +  R+   + IL G+   M
Sbjct: 360 GIEKLVRDLRVHQILEGTNEIM 381


>gi|91093605|ref|XP_966609.1| PREDICTED: similar to GA17761-PA isoform 1 [Tribolium castaneum]
 gi|270015758|gb|EFA12206.1| hypothetical protein TcasGA2_TC005122 [Tribolium castaneum]
          Length = 423

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 36/298 (12%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLS 236
           F  E       P   T+      LTE   G+D  A+ +  +K  DG  Y ++G K W  +
Sbjct: 142 FGNEEQKKTYLPRLATNTVSSFALTEPSSGSDAFALKTIAKK--DGSDYIINGSKMWISN 199

Query: 237 SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           S ++  F++LA  +   G     CF+V R     +P G    + + K+G  ++ T  L F
Sbjct: 200 SDLAGVFLVLANADPSKGYKGITCFIVER----DTP-GFTVAKPEKKLGIAASGTCMLTF 254

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR 342
            N       +LG+        +  K+ I  L+   + +    + LA+      I Y   R
Sbjct: 255 DNVRVPESAILGEFG------KGYKLAIETLNEGRIGIGAQMIGLAQGCFDATIPYTMER 308

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     M+  IA +A +I AA  + +  A   +  ++ ++EAA A       K+
Sbjct: 309 MQFGKPVFSFQGMQHQIAQVATEIEAARLMVYNAARILESGQNYTKEAAMA-------KW 361

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++A     + ++ +GG G+ ++    + YR+    SI  G+ N  +  +  L+EK
Sbjct: 362 YAAEIAQRACIKCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYNIHLSTIAKLIEK 419


>gi|330967954|gb|EGH68214.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|254419540|ref|ZP_05033264.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185717|gb|EDX80693.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 594

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGR 252
           LTE   G+D+ ++ +      DG Y L+G K +++    DA      ++LA++    +G 
Sbjct: 163 LTEPGAGSDLGSLITTATPNGDGTYALNGQKIYITWGDHDATDNIIHLVLARLPDAPKGP 222

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   FL P+    +DGS    NG     +++K+G  ++ T  + +      L+G  N  
Sbjct: 223 KGISLFLAPKFAVNDDGSLGDRNGFRPVGVEHKLGIHASPTCVMSYEGARAELVGRPNEG 282

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQ 352
                   + + +++A ++V    V +AE     A+ YA  R     +        + D 
Sbjct: 283 L-----AHMFVMMNAARLAVGVEGVGIAERAYQHALAYALDRRQGRSVWTGEANAPIFDH 337

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406
           P ++R +  +    +AA A+      + D A+    E    R      +  PI K W   
Sbjct: 338 PDVRRMLGVMKAKTSAARAICLSTGVAADLARHAGTEEDRRRWKAREDLFTPIAKAWSTD 397

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +   V +  ++  GG G+IEE   A++YR++    I  G+     +D++ 
Sbjct: 398 VGCEVASLGVQIHGGMGFIEETGAAQYYRDARIAPIYEGTNGIQAMDLVG 447


>gi|330801552|ref|XP_003288790.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium
           purpureum]
 gi|325081179|gb|EGC34705.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium
           purpureum]
          Length = 411

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +K ++G + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 152 LAMSEPNAGSDVVSMKTNAKK-TNGGWVLNGSKMWITNGPDADVLVVYAKTDINAGSKGI 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F + F   + D NV       +K+L+  
Sbjct: 211 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVIGQVGSGVKVLMSG 267

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +S      M+  L   I Y  +R   G  + +  +M+  +AD+   + A+ + 
Sbjct: 268 LDYERLVLSAGPLGIMQACLDNVIPYIHQREQFGKPIGEFQLMQGKVADMYTILNASRSY 327

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D   +  ++ A A I+      +  + A  +  +A++ +GG+GYI E    R
Sbjct: 328 VYSVAKSADNGYTSRKDCA-AVIL------YTAENATQMALQAIQTLGGNGYINEFPTGR 380

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 381 LLRDAKLYEIGAGT 394


>gi|323490502|ref|ZP_08095708.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323395768|gb|EGA88608.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 382

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252
           + +TE   G+D+A I++   +  D  Y ++G K F+++ ++   +++       A+ + R
Sbjct: 124 IAMTEPGTGSDLANISTTAVRDGDN-YIVNGQKTFITNGINSTLVLVVVKTDPKAEPKHR 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS---- 305
               L   ++E+G+P G    R  +K+G  +  T EL F +       L+G+ N      
Sbjct: 183 GISLL---MVEEGTP-GFEKGRKLDKVGLHAQDTSELYFEDCVVPAANLIGEENKGFTYL 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++  ++++ L + I S   + ++L     Y + R   G     +P+     +   L 
Sbjct: 239 MEKLQQERLVVALAAQIASEDMLDMTL----EYVKSRKAFG-----KPIGSFQNSQFKL- 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSG 423
                A    L +SF E+      A    I++ ++  KYW    A  +  E M+  GG G
Sbjct: 289 --VEMATEIELGHSFLESLIEDHMAG-KDIVSKVSMAKYWLTDTAKKISGECMQLHGGYG 345

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+EE  IAR YR+ P  +I  GS   M
Sbjct: 346 YMEEYKIARRYRDIPVAAIYAGSNEIM 372


>gi|296160331|ref|ZP_06843148.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295889312|gb|EFG69113.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRKGD-TYVLNGVKQFITSGKNGHVAIVMAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
             +      +  F+VP         G    R+++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DTQGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AQGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|315503371|ref|YP_004082258.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409990|gb|ADU08107.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 35/288 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++   L +TE  GG+D+A I +   +  D  Y ++G K +++S +   F+  A  
Sbjct: 114 PVLAGTMIGALAITEPDGGSDVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVC 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               G   V  L+ D    G    R   K+G   + T EL F +    +   +    GP 
Sbjct: 173 TEFPGSGSVSLLVIDKGTPGFTVGRRLEKLGWHCSDTAELSFVD----VRVPVTNRVGP- 227

Query: 310 EDMKILIYLDSAIMS-VSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMK 356
           ED   L     AIM   +  R+SLA             A+ + R R   G  L+ + V++
Sbjct: 228 EDTGFL-----AIMQQFANERLSLATQAYATAQRCVDLAVQWCRDRQTFGRPLVGRQVVR 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++     AA A    +A      +    E A A+ +A  T  W       V+  A+
Sbjct: 283 HKLAEMHSRTDAARAYVHDVAERVAAGQPVVTEVAMAKNVAVATCDW-------VVDAAL 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +  GG GY+ +  + RHYR++     LLG G      +  ++ KG  L
Sbjct: 336 QLHGGFGYMRDAEVERHYRDAR----LLGIGGGTTEIMNEIIAKGMGL 379


>gi|224053133|ref|XP_002189490.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain
           [Taeniopygia guttata]
          Length = 549

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 28/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++ +K  D  Y ++G K W   +  +  F ++A      G     C
Sbjct: 293 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWISLAEDAGVFFVMANTNPSSGYRGITC 351

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V R  E     GL   + ++K+G R+ +T  + F N     + + N+     +  K  
Sbjct: 352 FVVDRNTE-----GLHVGKKEDKLGIRACSTCPVTFDNV---KVPESNILGQVGQGYKYA 403

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L++  + ++   + LA+      I Y + R   G  + D   M+  IA +A  + AA
Sbjct: 404 IGMLNTGRIGIAAQMLGLAQGCFDRTIPYTKERVQFGKSVFDFQGMQHQIAQVATQLEAA 463

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A    ++ +E +GG G+ +   
Sbjct: 464 RLLTYNAARLAEAGRPAIKEASMA-------KYFTAEVATLTTSKCIEWMGGVGFTKNYP 516

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I ++YR+    +I  G+ N  +  +   L
Sbjct: 517 IEKYYRDCKIGTIYEGTSNIQLSTIAKFL 545


>gi|182677610|ref|YP_001831756.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633493|gb|ACB94267.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 33/298 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    TP    +WAP++   ++  +               LTE   G+D AA+ ++  +
Sbjct: 97  MIGRYGTPAQRNEWAPRLCRMDWVGS-------------YCLTEPSAGSDAAALRTRAIR 143

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + ++G K F+S    SD ++++ +  G  G   +  L+      G+ +   + K+
Sbjct: 144 EGDH-FIVNGAKQFISGGGASDVYVVMVRT-GTEGPKGISALVIFKDMEGVSFGANERKM 201

Query: 280 GNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G  +  T  + F N       LLG+      ++   ++  +    L+ A  S+ G + +L
Sbjct: 202 GWNTQPTCTVNFDNVMVPVSHLLGEEGDGFKIAMAGLDGGR----LNIAACSIGGAQSAL 257

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +++ Y R R   G  L     ++  IAD+A ++AAA       A + D       +   
Sbjct: 258 DKSVQYMRERSAFGATLDRFQALQFRIADMATELAAARIFLHHAARALD------AKLPD 311

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A +   + K +   +  AV  EA++  GG GY+ E  I +  R+   + IL G+   M
Sbjct: 312 ATVTCAMAKRFATDIGFAVANEALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIM 369


>gi|167586291|ref|ZP_02378679.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 395

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDVQKEQYLPKLATGEWIGCFGLTEPNHGSDPGSMITRAKKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A++E      +   +LE G   GL    +  K+G R++ T E+   + F 
Sbjct: 173 SPIADVFVVWAKLEEDGRDTIRGFILEKGW-KGLSAPVIHGKVGLRASITGEIVLDDVFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
                L  +    GP         L+SA   ++   +  AEA  +  R++V      G  
Sbjct: 232 PEENRLPHVGGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFCVARH 363


>gi|38505142|gb|AAR23112.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans]
 gi|40388398|gb|AAR85469.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans]
          Length = 430

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 27/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  +++ DG + L+G K W  +
Sbjct: 142 NGTPEQKARFLPGLLSGEKIGALAMSEHSAGSDVVSMKTSAKEV-DGGWVLNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               LLG++N        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 261 PRENLLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGA 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D   S    A   +  A    Y   + 
Sbjct: 315 PIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASLGSAAIRTQDCAGAILY-AAER 373

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 374 ATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 412


>gi|51893601|ref|YP_076292.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857290|dbj|BAD41448.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 26/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AAI +   +  D  Y L+G K F+++   +  +++ A+   +  VG   +
Sbjct: 124 LTEPGAGSDAAAIRTTAIRDGDS-YILNGEKTFITNGGQAGLYVVFARTNPDPSVGHRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI- 314
              L +    G    +   K+G  ++ T  L F +       LLG         E  KI 
Sbjct: 183 SAFLVEADTPGFSVGKPMEKMGLHASHTTTLHFEDCRIPASQLLGKEG------EGFKIA 236

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   V + +A     I +A+ RH  G  + +   +   IAD+A D+ AA
Sbjct: 237 MAILDRGRIGIAAQAVGITQAALEDSIKFAKERHTFGKPIAEHQAIAWKIADMATDLEAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A    +    ++E + A++ A        +MA     EA++  GG GY++E  
Sbjct: 297 RLLLYRAAFLMQQGVRATKEISMAKLFA-------SEMAMKHTVEAVQIHGGYGYMQEYR 349

Query: 430 IARHYRESPANSILLGS 446
           + R  RE+    +  G+
Sbjct: 350 VERLMREAKITQLYEGT 366


>gi|114048154|ref|YP_738704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889596|gb|ABI43647.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 385

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++    G+ G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQPGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L   
Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|309810327|ref|ZP_07704164.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308435719|gb|EFP59514.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 389

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 28/259 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR-V 253
           GL+E+  G+D A++ ++ ++  D  Y L+G K W  ++  S+ + +LA  +     GR +
Sbjct: 130 GLSEREAGSDTASMKTKAKRDGDH-YVLNGQKSWITNAGESEFYTVLAVTDPDGERGRNI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V +     S  G  +   + K+G + + T EL F N     +    +     + +K
Sbjct: 189 SAFVVEK-----SDEGFSFGEPERKLGIKGSPTRELHFDNC---RIPADRIVGAEGDGLK 240

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  LD   +++    V +A+     A+ Y + R   G  + +   ++  +AD+A+ + 
Sbjct: 241 IALRTLDHTRVTIGAQAVGIAQGALDYAVGYVKERQQFGKAIAEFQAIQFMLADMAMKVE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  + +  A     AKS  ++A  +       K +   +A  V  +A++ +GG+GY+++
Sbjct: 301 TARQMVYVAA-----AKSERQDADLS-FFGAAAKCFASDVAMEVTTDAVQLLGGAGYVKD 354

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R++    I  G+
Sbjct: 355 FPVERMMRDAKITQIYEGT 373


>gi|260063568|ref|YP_003196648.1| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|257796364|gb|EAR14186.2| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 137/296 (46%), Gaps = 30/296 (10%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +F  E       P   T+  IG  GLTE   G+D   + +  +K  D  + L+G K F++
Sbjct: 108 LFGDEEQKQRWIPKLATAEWIGAWGLTEHNTGSDAGGMNTTAKKDGDH-WVLNGAKNFIT 166

Query: 237 SPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
             +S    ++    G  G    +   ++E G+P G    + ++K+G R++ T EL F + 
Sbjct: 167 HGISGDVAVIIARTGEKGDSRGMTAFVVEKGTP-GFSSGKKEDKLGMRASETAELIFEDC 225

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               G  LG   V  G ++ MK+L   D   +S+  + + +A+    A  ++    +   
Sbjct: 226 RIPDGNRLGP--VGEGFIQSMKVL---DGGRISIGALSLGVAKGAFEASLKYSKERVQFG 280

Query: 352 QPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           +P+     +   +A++A +I AA  +  +     +  K  ++++A A++ A      C +
Sbjct: 281 KPISAFQGISFKLAEMATEIEAAELMVHKAGFLKNAGKPVTQQSAMAKMYASEV---CVR 337

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLE 459
           +A     EA++  GG GYI E  + + YR++   +I  G G   +  V+   NLL+
Sbjct: 338 VAN----EAVQIHGGYGYIREFPVEKFYRDAKLCTI--GEGTTEIQKVVISKNLLK 387


>gi|254485996|ref|ZP_05099201.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
 gi|214042865|gb|EEB83503.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
          Length = 392

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
           GLTE+  G+D   +T+  ++  DG + L+G K F+   P  D  I+ A+ +   G + V 
Sbjct: 138 GLTERETGSDAMKMTTTARE-RDGGFVLNGAKAFVGMGPACDLAIVFAKTDPDKGAWGVS 196

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312
             L + S  G        K+G R+     L F N +       G +   +++    +E  
Sbjct: 197 AFLVETSDAGFIRGAADEKMGLRTVPLGPLGFDNCWIPKDRLLGPVGAGMSIFQHTMEWE 256

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  I+       V  M   L +   YAR R   G  +ID   +   +AD+ L +  +  L
Sbjct: 257 RCFIFSSH----VGAMARQLKDCTAYARSRETFGVPIIDHQSVSNRLADMRLRLETSRLL 312

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A+  D+ +    EAA A++   I++ +      A   +A+   GG GY+    + R
Sbjct: 313 LYRAASLKDKKRPAPLEAAMAKLH--ISEAFA-----ASSLDAVRIFGGRGYLSADGVER 365

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE 459
             R++ A  I  G+ +     +  LL+
Sbjct: 366 DLRDATAGLIYSGTSDIQRQIIARLLD 392


>gi|71021499|ref|XP_760980.1| hypothetical protein UM04833.1 [Ustilago maydis 521]
 gi|46101055|gb|EAK86288.1| hypothetical protein UM04833.1 [Ustilago maydis 521]
          Length = 424

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L ++E   G+D+ ++T+   K  D      G  W  ++P+S  FI+ A+ + + G   + 
Sbjct: 165 LAMSEPDAGSDVVSMTTTAVKDGDDWVLNGGKMWITNAPISSTFIVYAKTDVKAGSKGIT 224

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + +    G       +K+G R + T E+ F N       +LG +N          ++ 
Sbjct: 225 AFILERGMTGFTTLPKLDKVGMRGSDTGEIHFDNVRVPATNVLGTVNRGAAV-----LMS 279

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366
            LD   + +SG  + LA+     A+ YA +R        +QP+     M+  IAD+   I
Sbjct: 280 GLDLERLVLSGGPLGLAQCAFDYAVRYAHQRK-----QFNQPIAHFQLMQAKIADMYTKI 334

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +AA +  + +A + D       + A A +       +    A  V ++AM+ +G +GY  
Sbjct: 335 SAARSYVYAVARACDLGHISRRDCAGAIL-------YASDRAVEVSSDAMQILGANGYTN 387

Query: 427 ERSIARHYRESPANSILLGS 446
           +  I R +R++   ++  G+
Sbjct: 388 DYGIDRMWRDARLYTVGAGT 407


>gi|301630363|ref|XP_002944291.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 395

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 23/329 (6%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +       R  D   KA   P   +   +G L ++E 
Sbjct: 77  HMVAMEEISRASASVGLSYGAHSNLCVNQIQRNGDAAQKARYLPRLISGEHVGALAMSEP 136

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+  +  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V   L +
Sbjct: 137 GAGSDVMGMQLKAEA-QGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F N     + + +V  G  +  K+L+  LD    
Sbjct: 196 KGMKGFSVAQKLDKLGMRGSHTGELVFENVE---VPESHVLGGVNQGAKVLMSGLDYERA 252

Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A  + ++ +A 
Sbjct: 253 VLTGGPLGIMQSVMDNVLPYIHARKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAK 312

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D      E     R        WC + A  +  E ++  GG+GYI E  + R +R++ 
Sbjct: 313 NLDLLGQ--EHVRQVRKDCASVILWCAEKATWMAGEGVQLFGGNGYINEYPLGRLWRDAK 370

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
              I  G+G + +  +L     G  LF Q
Sbjct: 371 LYEI--GAGTSEIRRML----IGRELFAQ 393


>gi|218663554|ref|ZP_03519484.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli IE4771]
          Length = 591

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/437 (20%), Positives = 176/437 (40%), Gaps = 56/437 (12%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGP-GGERW--DKVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L   G   G R    +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLIEGEVRLPDGWRELYRSWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175
                +F          + A  ++    +     ++P++T  ++ A+    +  +   + 
Sbjct: 91  LTAPEAFGGQALPDMLNVAALEMWNSGSMA--FALAPTLTMGAIEAVSAHGSAALKDKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+  + ++ ++ +DG Y + G K F+
Sbjct: 149 AKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     L   +  V+    +
Sbjct: 256 GIHGSPTCTMIYGDGRFGDEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAISEAA 315

Query: 332 LAEAIHYARRRHV-----SGGI----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +A+ YAR R       S G+    +++ P + R +  +      + A+S+  A + D 
Sbjct: 316 TQKALAYARERTQGRAPGSTGVGMSPIVEHPDVARMLLTMKALTQGSRAISYACAQALDM 375

Query: 383 AKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           ++   +   +   A ++ PI K +       V +  ++  GG G+IEE   AR+ R++  
Sbjct: 376 SRRAGDNRHWQERAALLTPIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARI 435

Query: 440 NSILLGSGNAMVLDVLN 456
             I  G+     +D++ 
Sbjct: 436 APIYEGTNGIQAIDLVT 452


>gi|194873782|ref|XP_001973277.1| GG13447 [Drosophila erecta]
 gi|190655060|gb|EDV52303.1| GG13447 [Drosophila erecta]
          Length = 414

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T +L F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       KY+  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLTTIAKCIKK 410


>gi|189197671|ref|XP_001935173.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981121|gb|EDU47747.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 398

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 39/305 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           + ++ K+W PK+               T+      L+E   G+D  A+ ++  +   G Y
Sbjct: 118 SEKLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDTG-Y 162

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            +SG K W  +S  ++ FI+ A ++  +    +   ++E G+P G    + + K+G +++
Sbjct: 163 KISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKGTP-GFAIAKKEKKLGIKAS 221

Query: 285 AT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AI 336
           +T       VE+   N  G        + G + + +I I        ++G+ +   E A 
Sbjct: 222 STCVITFDDVEIPRENLLGNEFEGYKYAIGLLNEGRIGI-----AAQMTGLALGAWENAA 276

Query: 337 HYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            YA       G LI +   M+  +A    +I AA AL +  A   +  +    +AA A++
Sbjct: 277 SYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARKKEAGEDFITDAAMAKL 336

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           MA        ++A  V  +A+E +GG G++ E    +++R+S   +I  G+ N  +  + 
Sbjct: 337 MA-------SQVAGRVSGQAIEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIG 389

Query: 456 NLLEK 460
             L+K
Sbjct: 390 KALQK 394


>gi|170691621|ref|ZP_02882786.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143826|gb|EDT11989.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S   ++  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNANVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP         G    RL+ K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DSKGYLVARLEEKLGQHSSDTAQIIFDDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGQPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|66043772|ref|YP_233613.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63254479|gb|AAY35575.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 600

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   +G Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                      V+G +  F+VP+ L  EDGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  +G   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|330880073|gb|EGH14222.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|326329059|ref|ZP_08195388.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953141|gb|EGD45152.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 378

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 40/296 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T     +W PK+ S E             V   + +TE   G+D+  I ++  K  D  Y
Sbjct: 98  TEEQKNEWLPKLASGE-------------VVSAIAMTEPGTGSDLQGIRTKAIKDGDE-Y 143

Query: 227 CLSGHKWFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++ +    +++A      +    +   +VP   E     G    R+ +KIG
Sbjct: 144 VVNGAKTFITNGLLADMVLVAVKTDPEEAAAGISLVIVPTDAE-----GFRRGRVLDKIG 198

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEA 335
            +   T EL F +       LLGD     G V+ M  L    L  A+ SV+ M     E 
Sbjct: 199 MKGQDTCELFFDDVRIPASNLLGDKE-GDGFVQLMMQLPQERLIVAVGSVAAMEFCFEET 257

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYAR 394
           + Y   R   G  +      K  +A+IA +         R+A SF DE      +     
Sbjct: 258 LRYVNERTAFGRPVFGFQNTKFEMAEIATEA--------RVARSFIDECVELHVKGELDI 309

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + KYW  + A  V+ + ++  GG G++EE  IAR + +     I  G+   M
Sbjct: 310 PTAAMAKYWSSERAGIVVDKCLQLFGGYGFMEEYPIARAFTDLRVQRIYAGTTEIM 365


>gi|78222919|ref|YP_384666.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194174|gb|ABB31941.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 386

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 51/307 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A ++ ++ +    + + PKI S EY             A    LTE   G+D A + +Q
Sbjct: 95  AAEVIQVVGSEEQKRAYIPKICSGEYS------------AASFALTETCAGSDPAGMVTQ 142

Query: 218 GQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVE-----GR-VGCFLVPRLLEDGSPNG 269
              + DG  + L+G K F++S   +  F++ A  +     G+ + CFLV    E G+P G
Sbjct: 143 A--VDDGDSWVLNGSKIFITSASYAGVFVVWAVTDKAAPKGKGISCFLV----EAGTP-G 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAI 322
           L   + ++K+G  ++AT E+ F++       ++G LN    ++   +   +I I      
Sbjct: 196 LIIGKEEHKMGQHASATNEVIFTDCRIPKSAMMGKLNDGFRIAVAELAGGRIGI------ 249

Query: 323 MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
               G+ V LA    A  YA  R   G  + +   ++  +AD   ++ AA  L    A  
Sbjct: 250 -GSLGLGVGLAAMDHATRYASERTQFGQKISNFQAIQWMVADAYTELEAARLLLMNAAFR 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ KS ++EA+ A++ A       C         A++ +GG GY ++  + R+ R++  
Sbjct: 309 KDQGKSFAKEASMAKLYATEAANRACYA-------AIQMLGGYGYTQDFPVERYARDARI 361

Query: 440 NSILLGS 446
            SI  G+
Sbjct: 362 TSIYEGT 368


>gi|291486303|dbj|BAI87378.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. natto BEST195]
          Length = 379

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 33/282 (11%)

Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           T +A+G       LTE R G+D  ++ +  ++I D  Y L+G K F+++  ++D +I+ A
Sbjct: 112 TQLALGEKIGAFALTEARSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +       +  F+V +  E     G    + + K+G RS+ T E+ F +        L
Sbjct: 171 VTDPEKKKKGITAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
                  E  KI +  LD     ++   V +A+     A+ YA+ R   G  + +Q  + 
Sbjct: 226 GQEG---EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIGEQQGIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I A+  L+++ A          + +A +++MA  T       A  V  EA+
Sbjct: 283 FKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTTEAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 336 QIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377


>gi|167033373|ref|YP_001668604.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859861|gb|ABY98268.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 589

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ +   A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       +
Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSYRISGSKIFITGGEQDLTENIVHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP+   +     G+ N      +++K+G +++AT  + F  
Sbjct: 214 VLAKLPDAPAGAKGISLFLVPKYQVEANGQLGARNAAHCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGIL 349
            FG+L+G+ N     +  M     L   I  +     S   A  YA    + R  SG   
Sbjct: 274 AFGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAASGPQA 333

Query: 350 IDQ---PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            D+   P++            R + +     AA       LA   ++A  R        +
Sbjct: 334 QDKAADPIIHHGDVRRMLLTMRTLTEGGRAFAAYVGQQLDLARYAEDAGEREHAQRLVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|56695488|ref|YP_165835.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56677225|gb|AAV93891.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 17/292 (5%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +AP+ F ++  P     + +  +   L +TE  GG+D+A ++++  +++ G + L+G K
Sbjct: 104 QFAPEPFRQDILPR----IVRGEMNSALAITEPGGGSDVANLSTRAARVAGG-WVLNGAK 158

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +++  M   + ++    G  G   +   L +    G     L  K+G   +    L F 
Sbjct: 159 AYITGGMDAQWFVVGARTGGPGLAGISLFLIEADTPGFSRTPLGGKMGWHCSTQAMLHFD 218

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     + +      L     S+  MRV    A+ +AR R   G  L
Sbjct: 219 DCHVPEAALIGPENKGFLAIMNNFNHERLAMVAGSLGMMRVCYRSALDWARERRTFGQRL 278

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+  V+    A+++  I    A   R+  + ++    + E A A++ A        K   
Sbjct: 279 IEHQVIAHKFAEMSARIDMTEAYLERICWAMNQGLMPAAEIAKAKVQA-------TKALE 331

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            V +E M+  GG+GY+    + R +RE    +I  G G+  +L  L + + G
Sbjct: 332 FVASEGMQIFGGAGYLTGNPVERVWREVKVMAI--GGGSEEILRDLAVRQMG 381


>gi|20807046|ref|NP_622217.1| Acyl-CoA dehydrogenase [Thermoanaerobacter tengcongensis MB4]
 gi|20515533|gb|AAM23821.1| Acyl-CoA dehydrogenases [Thermoanaerobacter tengcongensis MB4]
          Length = 380

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 20/275 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           ++E       P+ +        LTE   GTD A I +      D  Y L+G K F+++  
Sbjct: 103 TKEQKEKYLVPLARGEKLGAFALTEPNAGTDAAGIQTTATLEGDH-YVLNGCKIFITNGG 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++D +I+ A+ +   G   +   ++E G P G    +++ K+G R +   EL F +    
Sbjct: 162 VADVYIVFAKTDKSQGAKGISAFIVEKGFP-GFSIGKIEEKMGIRGSRAAELVFEDC--- 217

Query: 298 LLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351
           ++   N+     E  KI ++ LD   + +    + +A+A     I Y + R   G  +  
Sbjct: 218 IVPKENLLGKEGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVIKYVKERQQFGRPIGK 277

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  IA++A  ++AA  L +  A   +   S S EAA A++ A  T       A  V
Sbjct: 278 FQGLQWYIAEMATKVSAARHLVYYAAWRKENNLSYSMEAAMAKLFASET-------AMEV 330

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A++  GG GY ++  + R  R++    I  G+
Sbjct: 331 TTKAVQIFGGYGYTKDYPVERLMRDAKITEIYEGT 365


>gi|319787343|ref|YP_004146818.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465855|gb|ADV27587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 387

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE  GG+D A + +  +K   G + ++G K W  +  ++D  I+ AQ +  +  F+V
Sbjct: 133 FGLTEPHGGSDPANMKTHAKK-DGGDWVINGSKMWITNGNLADIAIVWAQTDEGIQGFIV 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
               E G+P G   Q +K+K+  R++ T  L F N        L ++    GP+  +   
Sbjct: 192 ----EKGTP-GFTAQEIKHKMSLRASVTSSLFFDNVRVPDSARLPNVKGLKGPLGCLTQA 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y       V      L EA++Y++ R + G  +      +  +AD+A  I  A  L  +
Sbjct: 247 RY-GITWGPVGAAIACLDEALNYSKERILFGRPVAATQSAQIKLADMARRITLAQLLVLQ 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L    D    + ++ + A       K+  C+MA  +  E  + +GG+G   E +  RH
Sbjct: 306 LGRLKDAGTMQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHAAIRH 356


>gi|170739921|ref|YP_001768576.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194195|gb|ACA16142.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 415

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A + ++ +KI DG Y LSG K W  ++P++D F++ A
Sbjct: 146 PKLATGEFVGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLSGAKTWISNAPIADVFVVWA 204

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +    + ++  F    +LE G   GL   ++K K+  R++ T E+           LL  
Sbjct: 205 KSPAHDNQIRGF----VLEKGM-KGLSAPKIKGKLSLRASVTGEIVMDGVEVPESALLPH 259

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           ++   GP         L+ A   +S   +  AE     A  Y   R   G  L    +++
Sbjct: 260 VSGLKGP------FGCLNRARYGISWGALGAAEDCWHRARQYTLDRTQFGRPLAQTQLVQ 313

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           R +AD+  +IA     S R+   FDE +   E       M  I K   C  A  +   A 
Sbjct: 314 RKLADMQTEIALGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALEIARTAR 366

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G + E  + RH
Sbjct: 367 DMHGGNGIMGEYHVMRH 383


>gi|269127099|ref|YP_003300469.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268312057|gb|ACY98431.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 375

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256
           L+E   G+D AA++++  +  D  Y ++G K W      +D +++ A+     GR +  F
Sbjct: 121 LSEPHAGSDAAALSTRAVRDGDH-YVITGTKAWITHGGEADFYVLFARTSDDGGRGISAF 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+     DG  +GL +   + K+G   + T +L F      +  +  +          L 
Sbjct: 180 LI-----DGRMDGLSFGPPERKMGLTGSTTAQLLFDGAR--VPAERRIGAEGQGFPIALS 232

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   V LA     EA+ YAR+R   G  +I+   +   +AD+A  + +A A
Sbjct: 233 ALDSGRLGIAACAVGLAQGALDEAVAYARQREQFGRPIIEHQGLGFLLADMAAAVESARA 292

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D     S +A+ A+++A          A  V  +A++ +GG GY  +  + 
Sbjct: 293 TYLEAARRRDRGLPFSRQASIAKLVA-------TDAAMKVTTDAVQVLGGYGYTRDFPVE 345

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I  G+
Sbjct: 346 RFMREAKVMQIFEGT 360


>gi|85710278|ref|ZP_01041343.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           NAP1]
 gi|85688988|gb|EAQ28992.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           NAP1]
          Length = 387

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 26/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           + +TE   G+D+ +IT+   K  +G Y ++G K ++S+  +  FI++       E   G 
Sbjct: 131 IAMTEPGVGSDLQSITTTALKDGNG-YRINGSKTYISNGQTADFIVVVAKTNPEERAKGI 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVS----TG 307
            L+  LLE     G    R  +KIG  +  T EL F N F      L G+         G
Sbjct: 190 SLM--LLETEGAEGFQRGRKLDKIGLDAADTSELFFDNVFVPAENVLGGEEGKGFYQLMG 247

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +++I + +A    +G+  +L   + Y + R   G  + D    +  +AD+    A
Sbjct: 248 ELAQERLVIAMGAA----TGIEKALETTLDYVKERKAFGQTIWDFQNTQFVLADLK---A 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             TA    + +    AK    E   A   A + KYW  ++   V+ + ++  GG+GYI +
Sbjct: 301 RGTAARVFVNDCI--AKLLKGELDVA--TAAMAKYWVTELQSEVVDKCLQLHGGAGYIND 356

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             IA+ YR++    I  GS   M
Sbjct: 357 YPIAKMYRDARITRIFGGSNEVM 379


>gi|330952465|gb|EGH52725.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 393

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|295689060|ref|YP_003592753.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295430963|gb|ADG10135.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 379

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   K+    Y L+G K F+S   +SD ++++A+  G     +   
Sbjct: 124 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDVYVVMARTGGEGAKGVSAF 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++E G+P GL +   + K+G  +  T ++ F N              GF    + +  G 
Sbjct: 183 VVEKGTP-GLSFGANERKMGWNAQPTAQVNFDNCRVPVENRIGQEGEGFRFAMMGLDGG- 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  S+ G + +L  A  Y   R+  G  L D   ++  +AD+A ++ A
Sbjct: 241 --------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  R A++ D     + +      +  + K +       V  +A++  GG GY+++ 
Sbjct: 293 ARLMVRRAAHALDNKHPEATK------LCAMAKRFATDAGFQVANDALQLHGGYGYLQDY 346

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + R  R+   + IL G+   M
Sbjct: 347 PLERIVRDLRVHQILEGTNEIM 368


>gi|256824703|ref|YP_003148663.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256688096|gb|ACV05898.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 389

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 17/280 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ + +     GL+E   G+D A +  +  + SDG + L+G K W  ++ +S+ + ++A 
Sbjct: 116 PVAEGTAMFSYGLSEAGAGSDTAGMQCKAIEQSDGSFVLNGQKSWITNAGVSEYYTVMAV 175

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
              EG+ G  +   ++E     G  +   + K+G + + T EL F N    +  D  V  
Sbjct: 176 TDPEGKRGKNITAFVVEK-DDEGFSFGEPEGKLGIKGSPTRELLFDNC--VIPADRMVGE 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
                   L  LD   +++    + +A+     A+ Y ++R   G  + D   ++  +AD
Sbjct: 233 RGRGLAIALQTLDHTRVTIGAQAIGIAQGALDAALDYVKQREQFGQRIADFQGVQFMLAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + + AA  L +  A     AKS   + A     A   K +   +A  +  +A++  GG
Sbjct: 293 MGMKLEAARQLVYNAA-----AKSERNDPALTYFGA-AAKCFASDVAMEITTDAVQLFGG 346

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GY ++  + R  R++    I  G+     + +   L KG
Sbjct: 347 YGYTKDFPVERMMRDAKITQIYEGTNQIQRMVMARQLLKG 386


>gi|113867310|ref|YP_725799.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526086|emb|CAJ92431.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 379

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 132/353 (37%), Gaps = 47/353 (13%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +GL C      +        H    A  Y  A L        S   A  +A +      +
Sbjct: 51  EGLLCVTLPTEYGGGGGDFGHSAIYAEEYARAGLSGVGFGVHSDIIAPYIARIGNEEQKQ 110

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W PK+ S EY              + +G+TE   G+D+ AI +   +  D  Y ++G K
Sbjct: 111 RWLPKVCSGEY-------------ILAIGMTEPGTGSDLKAIRTTATRDGDE-YVINGSK 156

Query: 233 WFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+S+ + +D  IM+ + +   G   V  ++ +    G    R  +K+G  +  T EL F
Sbjct: 157 TFISNGLNADLIIMVCKTDPTAGARGVSLIVVEAEREGFRRGRKLDKVGQHAQDTAELFF 216

Query: 292 SNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            N               F +L+ +L     P E + I      A+ + + + V L   + 
Sbjct: 217 DNVRVPVANLLGEEGKGFAYLMAEL-----PQERLSI------AVSAAAKLEVCLEHTLA 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R      + D    K  +ADI     +   L           +   EEAA A++ A
Sbjct: 266 YVKDRKAFSQTVWDFQNTKFKLADIKTQAISVRLLVDHYLGEHIRRRLTLEEAAIAKLHA 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   ++    + + ++  GG GY+ E  +AR + +     I  G+   M
Sbjct: 326 -------TEVLGTALDQMVQLHGGYGYMMEYPVARAFADMRVTRIYGGTSEVM 371


>gi|121594363|ref|YP_986259.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120606443|gb|ABM42183.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 388

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 30/263 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254
           LTE   G+D A+I ++ + + +  Y ++G K F+S   S D  +++A+        G + 
Sbjct: 124 LTEPGAGSDAASIKTRAELVGN-EYVINGSKAFISGAGSTDVLVLMARTGDAQSGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307
            F VP  L      G+ Y + + K+G  S  T ++ F N       LLG       ++  
Sbjct: 183 AFAVPANLP-----GIHYGKKEEKMGWNSQPTRQISFDNVRIPANHLLGQEGEGFKIAMK 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  SV   + +L  A  Y + R   G  +     ++  +AD+A ++ 
Sbjct: 238 GLDGGRINI----ATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELV 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA S  +A +R      A     + K +   +   V+ EA++  GG GYI E
Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDVGFNVVNEALQLHGGYGYIRE 347

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + R  R++  + IL G+   M
Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370


>gi|108798036|ref|YP_638233.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867131|ref|YP_937083.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768455|gb|ABG07177.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693220|gb|ABL90293.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 388

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 62/385 (16%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +LR +   G+  +I+ R  E V      ++ A R++   QL A
Sbjct: 27  PYASEWDESHHFPT--DVLREAAELGM-AAIYCR--EDVGGSGLRRVDAVRIF--EQLSA 79

Query: 149 GH-----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                   +S     A MV    +    K W P++ S E            S+A    LT
Sbjct: 80  ADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME------------SIA-SYCLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D +A+ ++  +  D  + L G K F+S +  SD ++++A+  G  G   +   +
Sbjct: 127 EPGAGSDASALRTKAVREGDH-FVLDGVKQFISGAGSSDVYVVMART-GSDGPRGISAFV 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVS 305
            +    G+ +   + K+G  +  T ++ F                    FG  +  LN  
Sbjct: 185 VEKDTPGVSFGAQEQKMGWNAQPTAQVVFEGARVPAENMLGGTDAEGSGFGIAMNGLNGG 244

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       L+ A  S+ G + +  +A  Y   R   G  L+D+P ++  +AD+A  
Sbjct: 245 R-----------LNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTIRFTLADMATA 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  +  L +R A + DE      E      +  + K +       V  +A++  GG GY+
Sbjct: 294 LQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQALQLHGGYGYL 347

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  I +  R+   + IL GS   M
Sbjct: 348 REYGIEKIVRDLRVHRILEGSNEIM 372


>gi|254417897|ref|ZP_05031621.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196184074|gb|EDX79050.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 387

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 34/278 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248
           +Q   +   + +TE   G+D+  + +   K  +G Y ++G K F+++     FI++    
Sbjct: 122 LQSGELVGAIAMTEPGAGSDLQGVKTTAVKSGNG-YVVNGSKTFITNGQLANFIIVVAKT 180

Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-- 304
              EG  G  L+  ++E     G    R  +KIG   N T EL F++    + GD N+  
Sbjct: 181 DPAEGAKGTSLI--VVETDGAEGFERGRNLHKIGMEGNDTSELFFNDVK--VPGD-NIIG 235

Query: 305 ---STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V+ M+ L    L+ A+  V+     L   + Y + R   G  +ID    +  +
Sbjct: 236 GAEGQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLAYVKERKAFGKRVIDFQNTQFKL 295

Query: 360 ADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           A++   +  A       +   L    D A             A + KYW   +    I E
Sbjct: 296 AEVKTKLTVAKVFVDHCIGLHLKGQLDAA------------TASMAKYWVTDIQGETIDE 343

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            ++  GG GY+ E +IA+ Y+++    I  G+   M L
Sbjct: 344 MLQLHGGYGYMNEYAIAQLYKDARVQRIYGGTNEIMKL 381


>gi|113970930|ref|YP_734723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885614|gb|ABI39666.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 385

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++    G+ G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQPGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L   
Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|327480526|gb|AEA83836.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 379

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 30/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ +        LTE + G+D +++ ++ ++  D  Y L+G K F++S      +++  
Sbjct: 110 GPLARGEQIGAFALTEPQAGSDASSLRTRARRDGDH-YVLNGAKQFITSGKHAGTVIVFA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295
           V     G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  
Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRL 223

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G       ++   +E  +I I    A  +V   R +   A  YAR R   G  +++   +
Sbjct: 224 GEEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYARERETFGKPIVEHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  IA A  +          A +  E    A + A + K +  +MA  V + A
Sbjct: 280 AFRLADMATQIAVARQM-------VHHAAALREAGRPALVEASMAKLFASEMAERVCSAA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 333 IQTLGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|171057878|ref|YP_001790227.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775323|gb|ACB33462.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 394

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A+  EG +  F 
Sbjct: 139 FGLTEPNHGSDPGSMITRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKDDEGAIRGF- 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+     F        D+    GP      
Sbjct: 197 ---VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPDVRGLKGP------ 246

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+  DI+  
Sbjct: 247 FTCLNSARYGIAWGALGAAEDCFQRARQYTMDRKQFGKPLAANQLIQKKLADMLTDISLG 306

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  A  +   A + +GG+G  +E  
Sbjct: 307 LQGCLRLGRMKDEGSASVE-------VTSIMKRNSCGKALDIARVARDMLGGNGISDEFG 359

Query: 430 IARH 433
           +ARH
Sbjct: 360 VARH 363


>gi|126651027|ref|ZP_01723238.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592228|gb|EAZ86277.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 382

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 121/290 (41%), Gaps = 41/290 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W PK  S +Y                + +TE   G+D+A I  Q   I DG  Y ++G K
Sbjct: 111 WLPKCISGDY-------------ITAIAMTEPGTGSDLANI--QTTAIRDGDHYIVNGQK 155

Query: 233 WFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F+++ +     ++A        +   G  L+  ++E+G+P G    R   K+G  +  T
Sbjct: 156 TFITNGIHTNLAVVAVKTNPSAEKKHQGISLL--VIEEGTP-GFTKGRKLEKVGMHAQDT 212

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
            EL F +       LLG+     G V  M+ L    L  AI +       LA  ++Y + 
Sbjct: 213 AELFFEDCRVPVQNLLGE--EGKGFVYMMEKLQQERLAVAIAAQIATEDMLALTLNYVKS 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APIT 400
           R   G  + D    +  IA++A  +         +  SF E+      A    +    + 
Sbjct: 271 RQAFGKSIGDFQNTQFKIAEMATKM--------EIGKSFLESLIEEHLAGKDVVTKVSMA 322

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           KYW  + A  +  + M+  GG GY+EE  IAR YR+ P  SI  G+   M
Sbjct: 323 KYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372


>gi|76801448|ref|YP_326456.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160]
 gi|76557313|emb|CAI48889.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160]
          Length = 381

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 27/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D+ A+ +  +K  D  Y ++G K W  +  ++D   + A+
Sbjct: 113 PLAQGEEIGAFALSEAGAGSDVPAMGTTAEKDGD-EYVINGDKLWISNGSVADTVTVFAK 171

Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
            +   G   +   ++   + +G   +  ++K+G++   T EL F +       LLGD   
Sbjct: 172 TDPEAGNKGISSFIVRPDTDDGFYVEGTEDKLGDKGCPTAELRFDDLRIPESRLLGD--E 229

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357
             G V+ +K L    +  A  SV   + +L EA  YA+ R        DQP+     ++ 
Sbjct: 230 GRGFVQALKTLNGGRITIAARSVGIAQAALDEAADYAQDRE-----QFDQPISDFQAIQH 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+     AA  L    A+     +S ++EAA A++       +  +++  V  E ++
Sbjct: 285 KLADMDTKTRAARLLMHDAADKKIRGESFAKEAAQAKL-------YASEVSREVANEGIQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY ++    R YR++  N I  G+
Sbjct: 338 IHGGYGYTKDFPAERFYRDAKLNEIYEGT 366


>gi|332668315|ref|YP_004451103.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332337129|gb|AEE54230.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 601

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 40/309 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAF-----IMLAQVEGR- 252
           + LTE + G+ ++ ITS  + ++DG  Y + G K ++S    +A      ++LA+++G  
Sbjct: 162 MALTEPQAGSSLSDITSSAEPVNDGEYYKIKGQKIYISGGDHNAVDNVVHLLLARIKGAP 221

Query: 253 -----VGCFLVPRL-LEDGS--PNGLCYQRLKNKIGNRSNATVEL----EFSNTFGFLLG 300
                +  F+VP+L  E+G    N +    +  K+G +      L    +  +  G+L+G
Sbjct: 222 VGTKGISLFVVPKLRYENGELVTNDVTTAGIYGKMGQKGYVAAHLMMGEQHDDCRGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGIL 349
             N     +  M     + + +++ +    +   ++ YA  R           H    ++
Sbjct: 282 QPNQGLRYMFQMMNEARIGTGMVAAATASAAYYASLKYANERPQGRHPSNKDVHQPQVLI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYA----RIMAPITKYWC 404
           I+   ++R +      +  + AL  + +   D A   + E+A  A     ++ PI K + 
Sbjct: 342 IEHADVRRMLLYQKAIVEGSIALLLQCSLYGDLAHHGQGEDAVNANLLLELLTPIAKSYP 401

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
            +M    +++ M+ +GG+GY ++  + +HYR+   N+I  G+     +D+L     +E G
Sbjct: 402 SEMGIHSVSQGMQVLGGAGYTDDFPLEQHYRDIRVNAIYEGTTTIHGMDLLGRKLTMENG 461

Query: 462 TNLFEQLFS 470
             L  QL S
Sbjct: 462 KGL--QLLS 468


>gi|311032041|ref|ZP_07710131.1| short chain acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 379

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 35/284 (12%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
           Q TS+  G GLTE   G+D   + +   K+    Y L+G K F+++  ++D +++ A  +
Sbjct: 116 QGTSIG-GYGLTEPGSGSDAGGMRTTA-KLDGDHYVLNGSKIFITNGGIADIYVVFAVTD 173

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                      + +    G    + + K+G RS+ T E+ F         D  V   PVE
Sbjct: 174 PSSKHKGTSAFIVEADFPGFSVGKKEKKLGIRSSPTTEIIFE--------DCRV---PVE 222

Query: 311 DM--------KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           +M        K+ +  LD     ++   V +A+     A+ YA+ R   G  +  Q  + 
Sbjct: 223 NMLGAEGEGFKVAMTTLDGGRNGIAAQAVGIAQGALDAAVAYAKERVQFGKPIAAQQGVS 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + A+  L+++ A    E  S   E+A +++ A  T       A  V  EA+
Sbjct: 283 FKLADMATTVEASRLLTYQAAWRESEGLSYGLESAMSKLFAGDT-------AMKVTTEAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GY ++  + R+ R++    I  G+     L +  +L K
Sbjct: 336 QVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379


>gi|237741753|ref|ZP_04572234.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|294785633|ref|ZP_06750921.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|229429401|gb|EEO39613.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|294487347|gb|EFG34709.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 381

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 25/285 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   ++ ++++A  +   G   +   + + +  G    + + K+G R ++T EL 
Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341
           F N       LLGD        +  KI ++ LD   + ++   + +A     EAI+YA+ 
Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAINYAKE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L      +  IA++ + + AA  L ++ A         S +AA A++ A  T 
Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|229115816|ref|ZP_04245218.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228667699|gb|EEL23139.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
          Length = 569

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224
           T    + + PKI S E+              IG   LTE   G+D ++A TS        
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   D+A   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIITYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|94969396|ref|YP_591444.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551446|gb|ABF41370.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 380

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 123/267 (46%), Gaps = 23/267 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T   IG  GLTE   G+D     +   +  D  + L+G K F+++   +D  +++A
Sbjct: 112 PKLATGEFIGAWGLTEPGSGSDAGGARTTAVRKGDK-WVLNGTKTFITNGHYADVVVVIA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
             +       +   L D    G    + +NK+G R++ T EL F +       LLG    
Sbjct: 171 VTDKAAHTHGLSAFLVDAGTKGFKLGKKENKLGLRASDTAELIFEDCEIPLANLLG--KE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
             G ++ M+IL   D   +S++ + + +A+  +     Y++ R   G  + +   ++  +
Sbjct: 229 GDGFIDSMRIL---DGGRISIAALGLGMAQGAYEAARDYSKERKQFGKAISENQAIQWKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A +I AA  L++R A   D     + E++ A++       +  ++A  V  E ++  
Sbjct: 286 ADMATEIDAARLLTWRAAWMKDSGMKTTLESSMAKL-------YTSEVAVRVANEGVQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G+I++    + YR+    +I  G+
Sbjct: 339 GGYGFIKDYPAEKFYRDVKLCTIGEGT 365


>gi|260060772|ref|YP_003193852.1| acyl-Coa dehydrogenase-like protein [Robiginitalea biformata
           HTCC2501]
 gi|88784902|gb|EAR16071.1| Acyl-CoA dehydrogenase-like protein [Robiginitalea biformata
           HTCC2501]
          Length = 392

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ A + +  +   D  Y L+G K W  ++P +D  I+ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPAGMVTNFKDAGDH-YLLNGAKLWISNAPFADIAIVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F N     +   N+  G       L  
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNV---KVPKDNLLEGKSGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  L
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERVQFGKPIAGTQLQQKKLAEMITEITKAQLL 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +FRL    +E ++ + + + A       K    +MA  +  EA + +GG G   E SI R
Sbjct: 307 AFRLGQLRNEGRATTAQISMA-------KRNNVEMALNIAREARQVLGGMGITGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|284993040|ref|YP_003411594.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284066285|gb|ADB77223.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 597

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 51/304 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + L+E + G+ +A IT++     DG Y L+G+K ++S    +       ++LA++ G   
Sbjct: 163 MALSEPQAGSSLADITTRAVPQDDGTYRLTGNKMWISGGDHELTENIVHLVLAKIPGGPP 222

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------N 293
               +  F+VP+ L D     G  N +    L +K+G R      L F            
Sbjct: 223 GVKGISLFIVPKFLVDPDGSLGERNDVVLAGLNHKMGYRGTTNTLLNFGEGVHTPGGRPG 282

Query: 294 TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG 346
             G L+G+    L      + + +I + + + ++  +G       A+ YAR R     +G
Sbjct: 283 AVGHLVGEPHRGLTYMFHMMNEARIGVGMGATVLGYTGY----LHALEYARTRTQGRRAG 338

Query: 347 G--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394
                     +I+ P ++R +           AL    A   DE ++   E   AR    
Sbjct: 339 AKDPDSPPVPIIEHPDVRRMLLAAKSYAEGGLALGLYCARLVDEEQTAETEEERARAHLL 398

Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              + PI K W  +  P     A++  GG GY  +  + + YR++  N I  G+     L
Sbjct: 399 LDTLTPIAKAWPSQWGPVADDLAIQVHGGYGYTRDYPVEQFYRDNRLNPIHEGTNGIQAL 458

Query: 453 DVLN 456
           D+L 
Sbjct: 459 DLLG 462


>gi|163855156|ref|YP_001629454.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258884|emb|CAP41183.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 34/265 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+GLTE   GTD+ AI +  ++  D  Y ++G K W  +    + F +L + + +     
Sbjct: 121 GIGLTEPDCGTDLQAIRTVARRDGDA-YVINGAKMWITNGYHGNCFALLVKTDPQA---- 175

Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            PR       + +  P G    R   K+G +   + EL F N    +  D  +  G VE 
Sbjct: 176 EPRHKGMSLFIAEKGP-GFTVSRQLEKLGYKGIDSTELVFENYR--VPADRLI--GGVEG 230

Query: 312 MKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             + + L+         A   V   + +L E++ YA++R   G  + +   ++  + D+A
Sbjct: 231 RGLQMVLNGLELGRINVAARGVGVAQAALRESVKYAQQRKTFGKPICEHQAIQTKLGDMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               A+  L  R A ++D  +    EA  A++ A  T       A     EAM   GG G
Sbjct: 291 TRTEASRLLVQRAAEAYDRGERCDMEAGMAKLFATET-------AVENSLEAMRIHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y +E  + R YR++P   +++G G 
Sbjct: 344 YSKEYLVERFYRDAPL--LVIGEGT 366


>gi|77464873|ref|YP_354377.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77389291|gb|ABA80476.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 403

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K + G Y LSG K W  ++P++D F++ A+ E   G++  
Sbjct: 145 FGLTEPDAGSDTAGMKTVARKTAQG-YVLSGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +LE G   GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA +H AR+    R   G  L    + +  +A++  DIA  
Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A      A +  GG+G  EE  
Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367

Query: 430 IARH 433
           + RH
Sbjct: 368 VMRH 371


>gi|330869522|gb|EGH04231.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 278

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 22  FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 79

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 80  ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 129

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 130 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 189

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 190 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 242

Query: 430 IARH 433
           IARH
Sbjct: 243 IARH 246


>gi|319650928|ref|ZP_08005063.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397284|gb|EFV77987.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 376

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 37/290 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223
           T    + + PK+ S EY                LG   LTE   G+D  ++ S+  K  D
Sbjct: 102 TEEQKQKYIPKLASGEY----------------LGAFCLTEPSAGSDAGSLKSRAVKDGD 145

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++   +D +I+ A     +G   +   + +    GL + + ++K+G  
Sbjct: 146 H-YVINGSKVFITNAGEADVYIVFASTNPELGSKGISAFIVEKDTPGLVFGKDEHKMGLH 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI----- 336
            + T++L F +     +   N+     E  KI +  LD+  + ++   + +AEA      
Sbjct: 205 GSRTLQLTFED---MRVPSENLLGNEGEGFKIAMANLDAGRIGIASQALGIAEAAFEAAA 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+          EA+ A++ 
Sbjct: 262 SYAKERVQFGKPIAAQQGVGFKLADMATSVEAAKLLIYRAADMRQRGIKCGLEASMAKLF 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        K A  V  EA++  GG GY E+  + R++R++    I  G+
Sbjct: 322 A-------SKTAVDVSTEAIQVFGGYGYTEDYPVERYFRDAKITEIYEGT 364


>gi|293608004|ref|ZP_06690307.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828577|gb|EFF86939.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 607

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283

Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +   G L+G+       +  M    +I + L +A +  +G       A+ YA+ R V G
Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388
                         LI    ++R +      ++ A AL    A      +S ++A+ R +
Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 398

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458

Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LD+L     L +G +   L E++ +T+ Q       K    L+D      +   L R
Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIAQ------AKAQPSLKDHADQLDQKWQLIR 512

Query: 503 FLTEKI 508
            +TEK+
Sbjct: 513 NVTEKL 518


>gi|258573685|ref|XP_002541024.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237901290|gb|EEP75691.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 429

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 31/249 (12%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G   L+G K W  +SP+SD F++ A++E  G++ 
Sbjct: 165 FGLTEPNHGSDPGSMETVARPHPTKKGYLSLTGAKTWITNSPISDLFLVWAKLEATGKIK 224

Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
            F++ R   D  P G L    +KNK   R++ T  ++  N       +L D+    GP  
Sbjct: 225 GFIIQR---DQCPTGTLETPTIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP-- 279

Query: 311 DMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIAL 364
                  L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD A 
Sbjct: 280 ----FTCLNSARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKKLADAAT 335

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D A  T  + ++A   DE K   E       M  + K   C  A        E  GG+  
Sbjct: 336 DAAYGTLAAVQVARLKDEGKCTPE-------MISMIKRQNCDRALVGARTLQEVFGGNAA 388

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 389 SDEYHIGRH 397


>gi|78224480|ref|YP_386227.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
 gi|78195735|gb|ABB33502.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
          Length = 390

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 36/281 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 129 LAMSEPGAGSDVVSMRLRADKKGD-RFILNGNKMWITNGPHADTLVVYAKTDMNAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F N     + + N+  G    + +L+  
Sbjct: 188 TAFLIEKGFKGFSTAQKLDKLGMRGSDTCELVFENC---EVPEENILGGVGRGVNVLMSG 244

Query: 318 --LDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366
              + A+++ SG    M+  +   + Y   R        DQP+     M+  IAD+   +
Sbjct: 245 LDYERAVLA-SGPLGIMQACMDVVVPYLHERK-----QFDQPIGQFQLMQGKIADMYTTL 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +AN+    ++  ++ A A + A     W       +  EA++C+GG+GYI 
Sbjct: 299 NASRAYVYAVANACTRGETSRKDCAGAILYAAEKATW-------MALEAIQCLGGNGYIN 351

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           E    R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 352 EYPTGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 386


>gi|327310127|ref|YP_004337024.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326946606|gb|AEA11712.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 381

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 32/275 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
             L+E   G+D AAI ++ ++   G + ++GHK W  +   +D +++ A+   R      
Sbjct: 122 FALSEPCCGSDAAAIQTKAER-RGGEWVINGHKMWITNGYYADYYLLAARTGPREARHKA 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           +  FL+PR          C +    ++ G R   T EL+F++        +    G    
Sbjct: 181 ITVFLLPR--------SRCVEATPIEVMGVRGTGTAELKFNDCVVGDDDVVGEVNG---G 229

Query: 312 MKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI+++ LD   +++SG+ V +A     EA+ +AR R + G  LI+    +  +A++   
Sbjct: 230 WKIIMHTLDVGRVAISGVAVGVARGAFEEALGWARSRELFGKRLIEMQNAQFELAEMLAS 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L++  A  +D   ++S +     +M+ + K    ++A  V   A++  GG GY 
Sbjct: 290 IETAKTLAYYAAYLYD---TKSPDFL---LMSHVAKLQAARLAVDVTRRAVQMEGGFGYS 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++      YR+S    I  G+   M   +  LLEK
Sbjct: 344 KDSKAEMFYRDSKILEIGEGTNEVMKYVIYKLLEK 378


>gi|307946381|ref|ZP_07661716.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4]
 gi|307770045|gb|EFO29271.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4]
          Length = 390

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLKAEKKGD-RYILNGNKMWITNGPTADTLIIYAKTDPDAGPKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPAENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A  +V  M+ ++   I Y   R   G  +    +++  +AD+ + + A+ A
Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYIHERKQFGQSIGTFQLVQGKVADMYVSMNASKA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A        + A  +  +A++ +GG+GYI E    
Sbjct: 306 YVYAVAQACDRGETTREDAAGAILYA-------AENATKMTLDAIQLLGGNGYINEYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|228999481|ref|ZP_04159059.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock3-17]
 gi|228760192|gb|EEM09160.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock3-17]
          Length = 381

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 59/318 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W PK  S E                 + +TE   G+D+A+I +  +K  D  Y
Sbjct: 103 TEEQKKRWVPKCVSGE-------------CITAIAMTEPGAGSDLASIRTTARKEGD-YY 148

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++ + +D  I++ + +  +     G  L+  +LE G       ++LK KIG
Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             S  T EL F         D+ V    +  E+ K   YL   +     + V++A     
Sbjct: 206 LHSQDTAELIFE--------DVKVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKAAA 256

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSR 386
               H++   + ++    ++I+D          + FRLA  + E            A   
Sbjct: 257 EVMLHITKNYVQERKAFGKSISDF-------QTVQFRLAEMYTEIEIGRTFVDDCIANHM 309

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E    ++   + K+W   +A  V AE ++  GG GY+EE  IAR YR+ P ++I  G+
Sbjct: 310 NGENIVTKV--SMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAIYAGA 367

Query: 447 GNAMVLDVLNLLEKGTNL 464
              M     N++ KG  L
Sbjct: 368 NEIM----KNIIAKGMGL 381


>gi|262203762|ref|YP_003274970.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087109|gb|ACY23077.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 392

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 37/266 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA++++  +  D  Y L+G K F+S +  SD ++++A+  G  G   +  
Sbjct: 132 LTEPGAGSDAAALSTKAVRSGD-EYVLTGVKQFISGAGSSDLYVVMART-GDAGPKGIST 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLNVS 305
            L D    GL +   ++K+G  +  T ++ F                  FG  +  LN  
Sbjct: 190 FLVDKDSPGLSFGAQEHKMGWHAQPTAQVIFDEVRVPADRLLGAQEGIGFGIAMNGLNGG 249

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       ++ A  S+ G + +  +A  Y   R   GG L+D+P ++  +AD+A  
Sbjct: 250 R-----------INIAASSLGGAQAAFDKAAAYVASRKAFGGALVDEPTIRFTLADMATG 298

Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A+  +    A + D ++  + E+ A A+     T Y        V   A++  GG GY
Sbjct: 299 LQASRLMLEHAAAALDADSPDKVEQCAMAKRFVTDTCY-------TVADSALQLHGGYGY 351

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I +  R+   + IL G+   M
Sbjct: 352 LSEYGIEKIVRDLRVHRILEGTNEIM 377


>gi|227824886|ref|ZP_03989718.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
 gi|226905385|gb|EEH91303.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
          Length = 384

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +A  +      D  Y L+G K F+++   ++ +++ A  +   G   +
Sbjct: 123 FGLTEPSAGTDASAQQTTAVLKGDK-YILNGSKIFITNGSEAETYVIFAMTDKSAGVHGI 181

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P G  + ++++K+G  ++ T EL F +     +   N+     E  KI + 
Sbjct: 182 SAFIVEKGMP-GFRFGKIEDKMGGHTSLTAELIFEDC---EVPKENLLGKEGEGFKIAMQ 237

Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + V+   + +A+     A+ Y++ R   G  +     +   +AD+A+ I AA  
Sbjct: 238 TLDGGRIGVAAQALGIAQGALDAAVKYSKEREQFGRSICKFQALSFKMADMAMKIEAARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R AN  +E K  S  AA A+  A         +A  V  +A++  GG GY  +    
Sbjct: 298 LVYRAANLKNEGKPYSAAAAMAKCFAS-------DVAMEVTTDAVQIFGGYGYTVDYPAE 350

Query: 432 RHYRESPANSILLGS 446
           R+ R +    I  G+
Sbjct: 351 RYMRNAKITQIYEGT 365


>gi|330809780|ref|YP_004354242.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377888|gb|AEA69238.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 375

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   ++     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGVVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F +     G  LG
Sbjct: 170 TDPSAGKRGISAFIVP----TDSP-GYSVARVEDKLGQHASDTCQILFEDLKVPVGNRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  ++ I    A  +V   R +   A  YAR R   G  +I+   + 
Sbjct: 225 EEGEGYKIALANLEGGRVGI----AAQAVGMARAAFEAARDYARERSSFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGQP-------ALVEASMAKLFASEMAEKVCSMAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLNDFPLERIYRDVRVCQIYEGTSD 365


>gi|78043643|ref|YP_360430.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995758|gb|ABB14657.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 380

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           PM +  +     LTE   G+D A++        D  + L+G K F+++   +D FI  A+
Sbjct: 113 PMAQGRMLGAYALTEPNSGSDAASLRLSAVDKGDH-FVLNGSKIFITNGSYADVFITFAR 171

Query: 249 V-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   EG + C +V    E  +P GL   +   K+G   + T EL F N    ++  
Sbjct: 172 TDPATKGAEG-ITCLIV----EKNTP-GLTISKPVEKMGLNGSVTCELYFENA---IVPK 222

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
            NV     E  K+ +  LD   +++    + +AE      ++Y ++R   G  +     +
Sbjct: 223 ENVLGKIGEGFKVAMQLLDGGRIAIGAQGLGIAEGAFEYTLNYIKQREQFGRPIAANQGI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A +I AA  L +R A   +     S+EAA A       K +    A  V  + 
Sbjct: 283 QWMVADMATEIEAAKLLVYRAAWLKNNGLPHSKEAAMA-------KKYATDTAMRVTTDC 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG GY +E  + R+ R++    I  G+
Sbjct: 336 VQLLGGYGYTKEYPVERYMRDAKITQIYEGT 366


>gi|224026774|ref|ZP_03645140.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM
           18228]
 gi|224020010|gb|EEF78008.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM
           18228]
          Length = 569

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L G+  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   +A I   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|198274173|ref|ZP_03206705.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135]
 gi|198272848|gb|EDY97117.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135]
          Length = 568

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L G+  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   +A I   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|56477122|ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56313165|emb|CAI07810.1| Glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 395

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 26/264 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 116 FGTEAQKKKYLPKLATGEWVGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 174

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG++  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229

Query: 296 GFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349
              + + N     V  +K     L+SA   ++   +  AEA +     Y   R   G  L
Sbjct: 230 ---VPEENAFP-TVRGLKGPFTCLNSARFGIAWGALGAAEACYETARQYTLDRKQFGRPL 285

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++++ +AD+  +I        RL    DE  +  E       +  I K   C  + 
Sbjct: 286 AANQLIQKKLADMLTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSL 338

Query: 410 AVIAEAMECIGGSGYIEERSIARH 433
            +   A + +GG+G  +E  +ARH
Sbjct: 339 DIARVARDMLGGNGISDEFCVARH 362


>gi|330972659|gb|EGH72725.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 600

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM +      + LTE   G+ ++ I ++ +   +G Y L G+K F+S     +S+  + L
Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHL 211

Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292
                    A V+G +  F+VP+ L  +DGS    N +    L +K+G +   +  L F 
Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270

Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +     G+L+G     L+     + + +I + L + ++  +G   SL     YAR R   
Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSL----DYARDR--P 324

Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386
            G L D         P+++           +A  + A D+    +  F    + +    R
Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+
Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469
                LD+L   L + G    +QL 
Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469


>gi|228911182|ref|ZP_04074987.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228848358|gb|EEM93207.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 381

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A     VG   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDVGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|297204595|ref|ZP_06921992.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710663|gb|EDY54697.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 385

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 43/286 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T     +W P+I S +             V     LTE   G+D + +T++     D   
Sbjct: 100 TEEQKAEWLPRIASGD-------------VLASFALTEPEAGSDPSTLTTRAHLDGDDWV 146

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                ++  ++P++D F++ A+ +        +  FLVP     G+P GL      +K+G
Sbjct: 147 INGAKRYITNAPLADVFMVFARTDPDAPRTRGISTFLVPA----GTP-GLTVAPKDHKMG 201

Query: 281 NRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
                T ++ F +        + GD  ++ G    M  + +     + +S + V +AE  
Sbjct: 202 QFGAWTADVYFDDVRVPASALVGGDAGLNRGFSTAMGCIAH---GRVHISALMVGMAERL 258

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              ++ YA  R  SG ++    +++  IAD   D  A  A     A  FD          
Sbjct: 259 VDESVAYASTRKQSGKLIGSFQLVQGLIADSQTDYYAGRATVLEAARGFDAGTD------ 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +I    TKY+  +M   V   A++  GG+GY+   ++ R YR++
Sbjct: 313 -TKIGPSCTKYFASEMVWRVADRAVQVHGGAGYMRGVAVERFYRDA 357


>gi|110833694|ref|YP_692553.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2]
 gi|110646805|emb|CAL16281.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2]
          Length = 595

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 155/367 (42%), Gaps = 46/367 (12%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMT------TPRVHKDWAPKIFSREY-DPTN 187
           IRA  L   A+ E G +  P + +A+   + T      T  V    A     R + + T 
Sbjct: 86  IRAGFLSSRARYEEGGMQLPEIAAAACKGMFTCVNPSSTGYVFLTAAAANVIRNFGNDTL 145

Query: 188 KA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMS 240
           KA    PM        + LTE   G+ +  I ++     +G Y + G K F+S   + ++
Sbjct: 146 KARFLEPMMAGRFTGTMALTEPHAGSSLTDIRTRAVPQDNGSYRIKGSKIFISGGENELA 205

Query: 241 DAFI--MLAQVEGR------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATV 287
           D  +  +LA++ G       +  F+VP  RL  +G P   N +    L +K+G R   + 
Sbjct: 206 DNIVHLVLAKIPGGPVGVKGISLFVVPKYRLDNNGHPDVRNDVILAGLIHKLGYRGTTST 265

Query: 288 ELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            L F +     G+L+G+    L      + + ++ +   + ++   G R +L  A    +
Sbjct: 266 ALSFGDADDCHGYLVGEAHQGLRYMFQMMNEARLGVGFGAGLLGYRGYRFALDYARDRRQ 325

Query: 341 RRHVSGG-------ILIDQPVMKRAIADIALDIAAATALS---FRLANSFDEA-KSRSEE 389
            RH            LI+   +KR +        AA A+S   +RL +  +   ++ S+E
Sbjct: 326 GRHPDDADFSKPQVPLIEHADVKRLLLTQKAYAEAAIAMSLYGYRLVDDIETGNETTSKE 385

Query: 390 A-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A     ++ P+ K W  +        A++  GG+GY  E  + + +R++  N I  G+  
Sbjct: 386 AELLLDLLTPVLKTWPSEFGVRANDMAIQVFGGAGYTREYPVEQVWRDNRLNPIHEGTTG 445

Query: 449 AMVLDVL 455
              LD+L
Sbjct: 446 VQGLDLL 452


>gi|322708406|gb|EFY99983.1| glutaryl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 427

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++ S  +      G + LSG K W  +SP++D  ++ A
Sbjct: 154 MAKGKLLGAFGLTEPNHGSDPGSMESVAKPHPTKKGYFSLSGAKTWITNSPIADVLLVWA 213

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           +++  G++  FLV R  +D  P  L    +K+K G R++ T  ++          +  D+
Sbjct: 214 KLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDECPVPEANMFPDV 271

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
               GP         L+SA   +S G+  +L + I  AR     R+   G  L    +++
Sbjct: 272 EGLKGPFS------CLNSARYGISMGVMGALEDCIARARTYALERKQFKGNPLAKYQLIQ 325

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD A D A  T  + ++    DE K+  E       M  + K   C +A        
Sbjct: 326 KKLADAATDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDVALRNARILQ 378

Query: 417 ECIGGSGYIEERSIARH 433
           E  GG+   +E  I RH
Sbjct: 379 EIFGGNAVSDEYHIGRH 395


>gi|222147745|ref|YP_002548702.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221734733|gb|ACM35696.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 591

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 178/441 (40%), Gaps = 64/441 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117
           L E +     +E  R A      L A G   G +  D KV+    W  L RR    G + 
Sbjct: 31  LSEDLTDAILEEAGRFAANEIAPLAANGDRQGAKLVDGKVQLPDGWADLYRRWAEGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
            + +  +    +   H +  A L +      G  + P +T  +  AL  T    +    K
Sbjct: 91  LVAEERYGG--QGLPHLLNVAALEMWNSGSMGFALGPVLTMGASEAL--TAHGSEALKEK 146

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R       A M          LTE   G+D+  + ++ ++ +D  Y + G K +++ 
Sbjct: 147 FLHRMVSGEWMASMN---------LTEPHAGSDLGVMKTRAERQNDSTYRIFGQKIYITW 197

Query: 238 PMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGN 281
              DA      ++LA++         +  FLVP+ L  +DGS    N L    L++K+G 
Sbjct: 198 GEHDATDNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + T  + F +          G+++G+ N     +  M     +++A ++V    V++A
Sbjct: 258 HGSPTCTMIFGDGRFGDDPGAIGYVIGEENKGLACMFTM-----MNNARLAVGMQGVAIA 312

Query: 334 EA-----IHYARRRH-------VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANS 379
           EA       YAR R           G+  +I+ P + R +  +      A A+ +  A++
Sbjct: 313 EAATQLATAYARERTQGKAPGWTGAGMSPIIEHPDVARTLLTMKALTQGARAICYSCAHA 372

Query: 380 FDEAK-SRSEEA----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            D +  S  +EA    A A  + PI K +   +   V +  ++  GG G+IEE   AR  
Sbjct: 373 IDMSHHSEGDEARHWQARAAFLTPIAKSFATDIGVDVASMGIQVHGGMGFIEETGAARLL 432

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R++    I  G+     +D++
Sbjct: 433 RDARIAPIYEGTNGIQAIDLV 453


>gi|325283664|ref|YP_004256205.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315473|gb|ADY26588.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 385

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 29/257 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           LTE + G+D A++ ++  +  D  + +SG K W  S   +D ++++A+  G     V CF
Sbjct: 128 LTEPQAGSDAASLKTRAVRDGDD-WLISGSKAWITSGGHADLYMVMARTGGEGARGVSCF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309
           +V    E G+P GL + R + K+G  +  T  + F         ++G+    L V+   +
Sbjct: 187 VV----EAGTP-GLSFGRPEEKMGQHAAHTTAVTFEGVRVPASAMIGEEGQGLIVALSSL 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I     ++ V   + +L  A  YA  R   G  +     +   +A +A  + AA
Sbjct: 242 DAGRIGI----GMLGVGIAQAALEHAARYAAEREQFGKPIAAHQAVSFKLARMATQLEAA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  + A   D+ +  S+EA+ A+++         + A  V  +A++  GG+GY  E  
Sbjct: 298 RLVGLKAAWLKDQGQPFSKEASMAKLLG-------SEAAVDVTRDAVQIFGGNGYSAEYP 350

Query: 430 IARHYRESPANSILLGS 446
           + + YR++    I  G+
Sbjct: 351 VEKLYRDAKITEIYEGT 367


>gi|254383379|ref|ZP_04998731.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194342276|gb|EDX23242.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 608

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 82/393 (20%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           Y+  N+A  +   +A+       + LTE   G+D+ A  ++  + +DG + + G K F++
Sbjct: 139 YEEGNEAQKKVAEIAVEKRWGSTMVLTEPDAGSDVGAGRTKAVQQADGSWHIEGVKRFIT 198

Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S   D        +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMEENILHYVLARPEGHGPGTKGLSLFLVPKFHFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333
           G +++ T E+ F +     G+L+GD +     +  M ++I     ++   +++ +     
Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKHDG---IRQMFMIIEFARMMVGTKAIATLSTGYL 315

Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380
            A+ YA+ R V G  L +              P ++R++           AL    A+  
Sbjct: 316 NALEYAKER-VQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQ 374

Query: 381 DEA--KSRSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           DE   K  + E A A I     + PI K +  + +   +A++++  GGSGY++E  I ++
Sbjct: 375 DEIQLKQAAGEDASAEIGLNDLLLPIVKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQY 434

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            R++  +++  G+  A+         +G + F   F  + +D G+S    + +L ++I  
Sbjct: 435 IRDAKIDTLYEGT-TAI---------QGQDFF---FRKIVRDQGAS----LNVLSETIK- 476

Query: 494 CKEDKGLARFLTEKIA---LASSAAALYRAGMN 523
                   +FL E +    LA +  AL +A ++
Sbjct: 477 --------KFLAEAVGGEELAGARDALAKAAVD 501


>gi|167763198|ref|ZP_02435325.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC
           43183]
 gi|167698492|gb|EDS15071.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC
           43183]
          Length = 568

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDETNNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|197119936|ref|YP_002140363.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197089296|gb|ACH40567.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR- 260
           TE   G+D+ A+ ++ +K  D  Y ++G K F+++  ++D  ++ A      G   +   
Sbjct: 125 TEPNAGSDLLAMKTRAEKKGDR-YVINGQKCFITNGSVADVMVVYAYTAPDKGSKGISAF 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           ++E G+P GL Y R ++K+G R +   EL F N       LLG     TG    M+ L  
Sbjct: 184 VVEKGTP-GLVYGRNEHKMGMRGSINSELFFENMEIPAENLLGP--EGTGFANLMQTLST 240

Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  +V   + +L  A+ + R R   G  +     ++  IAD+A  + AA  L+ +
Sbjct: 241 NRVFCAAQAVGIAQGALDIAMAHCRDRVQFGKPIAHLAPVQFMIADMATKVEAARLLTRQ 300

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D A  +S     A +   + K +    A +V  +A++ +GGSGY++E  + R  R
Sbjct: 301 AARALD-ANDKS-----AVLYGSMAKTFASDSAMSVTTDAVQVLGGSGYMKENGVERMMR 354

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 355 DAKLTQIYTGT 365


>gi|126727131|ref|ZP_01742968.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126703559|gb|EBA02655.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 387

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++T + +K  +G Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMTLRAEK-RNGYYRLNGNKYWITNGPDADTLVVYAKTDPDAGAKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVED 311
              + + +  G       +K+G R + T EL F +    F  +LG+    +NV    ++ 
Sbjct: 187 TAFIVEKTMTGFSTSPHFDKVGMRGSNTAELIFEDVEVPFENVLGEEGRGVNVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++    A +    M   + E + Y   R   G  + +  +M+  +AD+   + +A A
Sbjct: 247 ERVVL----AGIGTGIMAACMDEVMPYMVERKQFGQPIGNFQLMQGKVADMYTAMNSARA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  K   ++AA   +       +  + A     +A++ +GG+GY+ + +++
Sbjct: 303 YVYEVARACDRGKVTRQDAAACVL-------YASEQAMVQAHQAVQALGGAGYLADSTVS 355

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 356 RLFRDAKLMEIGAGT 370


>gi|291523045|emb|CBK81338.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 379

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 32/260 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFL 257
           LTE   G+D +A  ++ + ISDG  Y ++G K F+S+      D  +++A  +   G   
Sbjct: 123 LTEPGAGSDASA--AKTKAISDGDDYIINGTKCFISNMGPEEGDYVVLIALTDPSAGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +  ++ D +  G    +L+NK+G R     EL F +     +   N+     E  KI + 
Sbjct: 181 MSAIVVDRNTPGFSVGKLENKMGLRGANVSELIFQDC---RVPKSNLLGKEGEGFKIAMA 237

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366
            LD   + ++   V +AE     A+ YA+ R     +   +P+     ++   ADIA   
Sbjct: 238 ALDGGRIGMASQAVGIAEGAIDLAVAYAKER-----VQFKKPISANQGIQWYFADIATST 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ + A+     ++  + AA A       KY+  + A  V  +A++  GG GY++
Sbjct: 293 EAAKMLTLQAADLRQRGQNIGKLAAMA-------KYYASENAVTVTNKALQIHGGYGYMK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E +I R YR++   ++  G+
Sbjct: 346 EYAIERMYRDARITTLYEGT 365


>gi|256390554|ref|YP_003112118.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256356780|gb|ACU70277.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 385

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 41/281 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
            Q   +   + +TE   G+D+A I +  +   DG  Y L+G K F++   ++D  +++A+
Sbjct: 115 FQSGEMMTAIAMTEPGTGSDLAGIQTTAKLSEDGRHYVLNGAKTFITGGVLADMVLVVAR 174

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                 E R G   +  L  D    G    R  +KIG +++ T EL F+        D+ 
Sbjct: 175 TAPATPEDRRGGLSI--LCVDTKAAGYSVGRKLDKIGLKTSDTAELAFT--------DVP 224

Query: 304 VSTGPVEDM-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           V   PVED+     K   YL           A+   +    +L  A+ Y R R V G  +
Sbjct: 225 V---PVEDLLGEPGKGFSYLTHNLPQERLAIAVGGYASASAALQFALDYVRERTVFGTSV 281

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 K  +A+ A ++ AA  +        D A    E    +   A   K +C + A 
Sbjct: 282 ASFQNTKFVLAECATEVEAAQCM-------VDRALELHEAGELSVADAAKVKLFCTEAAG 334

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            VI + ++  GG GYI E  IAR Y ++  + I  G+   M
Sbjct: 335 RVIDKCLQLHGGYGYITEFPIARLYADTRVSRIYGGTSEVM 375


>gi|126732493|ref|ZP_01748292.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707132|gb|EBA06199.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 410

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A + ++  K ++G Y L+G K W  +SP++D F++ A
Sbjct: 141 PKLATGEWIGCFGLTEPDAGSDPAGMKTRAVK-TEGGYRLNGSKMWISNSPIADVFVVWA 199

Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           + E   G++  F    +LE G+  GL   +++NK+  R++ T E+   N       LL  
Sbjct: 200 KSEAHDGKIRGF----VLEKGA-KGLTAPKIENKLSLRASVTGEVVLDNVEVGEDALLPH 254

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356
           +    GP         L+ A   +S   +  AEA  +A R +       D+P+      +
Sbjct: 255 VQGLKGP------FGCLNRARYGISWGVLGAAEACWHAARAYGLDRKQFDKPIAGTQLFQ 308

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +IA       R+    DEA+   E       M  I K   C  A  +   A 
Sbjct: 309 KKLADMQTEIAFGLQGCLRVGRLMDEARGAPE-------MISILKRNNCGKALEIARMAR 361

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G   E  + RH
Sbjct: 362 DMHGGNGISAEFQVIRH 378


>gi|111019622|ref|YP_702594.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819152|gb|ABG94436.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 47/313 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    ++W P+I S E            ++A   GLTE   G+D   + ++  +  D  Y
Sbjct: 103 TEDQKREWLPRIASGE------------ALAC-FGLTEPDNGSDPGNLKTRAVRSGDD-Y 148

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            ++G K F+++   +   ++ A+  G     V  FLVP         G   + +  K+G 
Sbjct: 149 VINGSKIFITNGTWAKLCLVFARTGGSGPKGVSAFLVPT-----DTPGFESREIHGKLGL 203

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334
           R  AT EL F++       LLG    S G  +   I ++ LD   +SV    V + +   
Sbjct: 204 RGQATAELSFTDVRVPASCLLG----SEG--QGFSIAMHSLDKGRVSVGAGCVGIIQGCL 257

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y+R R      L    +++  IAD+++D  A   L++R A+  +  +     A+ 
Sbjct: 258 EAAVDYSRERTQFNRPLASFQLVQDLIADMSVDADAGRLLTWRAADLIERGEPFGTAASK 317

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       KY+C + A      A++  GG GY++E  +A++ R++   ++  G+     L
Sbjct: 318 A-------KYFCSEAAVRAANNAIQIFGGYGYVDEYPVAKYLRDARVMTLYEGTSQIQKL 370

Query: 453 DVLNLLEKGTNLF 465
            ++   E G + F
Sbjct: 371 -LIGRAETGVSAF 382


>gi|47228564|emb|CAG05384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 399

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 37/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
             L+E   G+D  A ++   +  D  + L+G K W  +S  + A ++ A  + +      
Sbjct: 138 FALSEPGNGSDAGAASTTAFQEGDE-WVLNGTKAWITNSWDASAAVVFATTDKKLKHKAG 196

Query: 253 VGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           +  FLVP       P+ GL   + ++K+G ++++T  +   +      ++LG        
Sbjct: 197 ISAFLVPM------PHPGLSLGKKEDKLGIKASSTANIILEDCRIPLSYMLGPRGAG--- 247

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
               KI +  LDS  + ++   + +A+A     + YA++R+  G  +     ++  +AD+
Sbjct: 248 ---FKIAMQTLDSGRLGIASQALGIAQASLDCAVDYAQKRNAFGAPISKLQAIQFKLADM 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + +A  L+++ A   D  K  ++EAA A++ A     +C         +A++ +GG 
Sbjct: 305 TVALESARLLTWKAAILRDSKKPFTKEAAMAKLAASEAATYCSH-------QAIQILGGM 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+ +    RHYR++    I  G+     L + N + K
Sbjct: 358 GYVSDMPAERHYRDARITEIYEGTSEIQRLVIANQVLK 395


>gi|311897526|dbj|BAJ29934.1| hypothetical protein KSE_41480 [Kitasatospora setae KM-6054]
          Length = 609

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIEGVKRFITSGEHDMSENIVHLVLARPEGGKPGT 223

Query: 253 --VGCFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +G ++VP+      + E G  NG+    +++K+G +++ T E+ F       G+LLG+
Sbjct: 224 KGLGLYIVPKYDFDWEIGELGERNGVYATNVEHKMGLKASNTCEMTFGAKHPAKGWLLGE 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
                G  +  KI+ +  +     +++ +      A+ YA+ R V G  L          
Sbjct: 284 --TVDGIRQMFKIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGADLAQFMDKTAPR 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYAR----IMAPI 399
                 P ++R++           AL    A+  D+   A+ R E  A A     ++ PI
Sbjct: 341 VTITHHPDVRRSLLTQKAYAEGMRALVLYTASVQDDMLAARLRGEHDAAAERLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + +   +A++++  GGSGY++E  I ++ R++  +++  G+
Sbjct: 401 VKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT 447


>gi|30023373|ref|NP_835004.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|29898934|gb|AAP12205.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
          Length = 381

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLMAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|145222706|ref|YP_001133384.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145215192|gb|ABP44596.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 47/301 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +T     K W P + S E               I + +TE   G+D+A I +   +  D 
Sbjct: 102 LTNDEQKKRWLPGVTSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + ++G K F+SS ++ D  +++A+ +   G      F+V R +E     G    R  +K
Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERDME-----GFTRGRKLDK 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329
           +G  S  T EL F N       LLG         ++  P E + I      AI +++G R
Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E + Y++ R   G  +      +  +A++  ++        R      + +  + E
Sbjct: 257 AVFDETLQYSKDRKAFGQSIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGELTAVE 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K+W  ++A  V+ + ++  GG GY+ E  +AR Y +    +I  G+   
Sbjct: 317 AAKA-------KWWATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEI 369

Query: 450 M 450
           M
Sbjct: 370 M 370


>gi|317122092|ref|YP_004102095.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
 gi|315592072|gb|ADU51368.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
          Length = 396

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 24/273 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   +  D  Y L+G K F+S+  +++ +++ A  +   G   +  
Sbjct: 128 LTEPDAGSDAAALKTTAVRDGDH-YVLNGRKTFISNGGVAEIYVVFAVTDPAAGSRGISA 186

Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-L 315
            L+E G+P GL + +   K+G R+++T ++           L+G         +  KI L
Sbjct: 187 FLVEKGTP-GLSFGKPFKKMGIRASSTTDVILEQVRVPASHLIGREG------QGYKIAL 239

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + +    V +A+     A+ YA +R   G  +     ++  +AD+A  I AA 
Sbjct: 240 ATLDNGRVGIGAQAVGIAQAALDRAVAYASQRRQFGRPIGSFQGIQFKLADMATQIEAAR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +R A  +DE+      A+    MA   K +  ++A  V  EA++  GG GY+++  +
Sbjct: 300 LLVYRAAVLYDESVRTGRRASKEIAMA---KLFASEVAMQVTTEAVQIHGGYGYLQDFEV 356

Query: 431 ARHYRESPANSILLGSGNA--MVLDVLNLLEKG 461
            R  R++    I  G+     MV+    L E G
Sbjct: 357 ERLMRDAKITQIYEGTSEVQRMVIARALLAEAG 389


>gi|311695430|gb|ADP98303.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 386

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 30/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP SD   +LA           
Sbjct: 123 IGVSEVGAGSDVAGMKTTARKDGDD-YIINGSKMWITNSPKSDFICLLANTSDDKPHKNK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +VP         G+ +    NK+G RS+ T ++ F +      + +G    + G   
Sbjct: 182 SLIIVPT-----KTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIG----AEGTGF 232

Query: 311 DMKILIYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            M++L + +  I      +  +   + + I Y R R   G  LID  V+   +A++  ++
Sbjct: 233 MMQMLQFQEERIWGAANVIKALENCITKTIEYCRERKTFGQPLIDNQVIHFRLAELQTEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  AL+++      E K  +  A+ A++ A        ++   V    ++  GG+GY+ 
Sbjct: 293 EALRALTYQACELHVEGKDVTRLASMAKLKAG-------RLGREVTDSCLQYWGGNGYMW 345

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           +  I+R +R+    SI  G+   M+
Sbjct: 346 DNPISRAHRDVRLVSIGGGADEIML 370


>gi|306821449|ref|ZP_07455053.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550524|gb|EFM38511.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 377

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
            GLTE   G+D  A    GQ I+      Y L+G K F++ +P+ D  I+ A  +   G 
Sbjct: 121 FGLTEPGAGSDAGA----GQTIAIDKGDYYELNGRKCFITNAPICDFAIISAMTDKSKGT 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
             +   + +    G  +   +NK+G R   T ++   N       LLG +       +  
Sbjct: 177 KGISTFIVESKWEGFSHGAHENKMGIRGTETSDIILENVKVPKENLLGKVG------QGF 230

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR-----AIAD 361
           KI++  LD   + V+   + +A     EAI Y + R     +  ++P+ K       IAD
Sbjct: 231 KIMLNTLDYGRIGVAAQALGVAQGALDEAIKYVKER-----VQFNKPLAKFQNTQFTIAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L +  A   D  +    E+A A       KY+  ++A  V  +A++  GG
Sbjct: 286 MATKVQAARLLVYDAAEKKDNGQVPGLESAMA-------KYYAAEIANEVAYKALQLHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+I++  I R YR++   SI  G+
Sbjct: 339 YGFIKDYPIERIYRDARILSIYEGT 363


>gi|302552787|ref|ZP_07305129.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302470405|gb|EFL33498.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 608

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+ L D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399
                 P ++R++           AL    A+  DE + +           A   ++ PI
Sbjct: 341 VTVTHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIQVKESAGEDVSALEALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  +     +A++++  GGSG+++E  I ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447


>gi|126463715|ref|YP_001044829.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105379|gb|ABN78057.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 403

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K ++G Y LSG K W  ++P++D F++ A+ E   G++  
Sbjct: 145 FGLTEPDAGSDPAGMKTVARKTAEG-YVLSGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +LE G   GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA +H AR+    R   G  L    + +  +A++  DIA  
Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A      A +  GG+G  EE  
Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367

Query: 430 IARH 433
           + RH
Sbjct: 368 VMRH 371


>gi|262197630|ref|YP_003268839.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080977|gb|ACY16946.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 384

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 132/326 (40%), Gaps = 64/326 (19%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP + +  + ++  R   PT           + LG++E   G+D+AAI +  ++  D 
Sbjct: 93  MATPALARYGSEELCERFLRPTISG-----EFVVCLGVSEVGAGSDVAAIRTHARRDGDD 147

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-------------GL 270
            Y + G K W  +   +D  ++LA                DG P+             G+
Sbjct: 148 -YLIRGSKMWITNGTQADYMVLLANTG-------------DGEPHRNKSLLCVPMDTPGV 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY---------L 318
              R  +K+G R + T E+ F +      F +G         E+ K  +Y         L
Sbjct: 194 QVARKLDKLGMRCSDTAEVVFEDVRIPQRFRIG---------EEGKGFLYQMQQFQEERL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M  ++A+ I Y R R V G  LID  V+   +A++A ++    AL +R   
Sbjct: 245 WGATAWLVPMDQAIADTIAYTREREVFGKPLIDNQVIHYRLAELATEVEMLRALVYRAVE 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +   +  +        +A + K    +++  V    ++  GG G++ E  I+R YR+  
Sbjct: 305 LYIGGEDVTR-------LASMVKLKAGRLSREVADSCLQYYGGMGFMNETPISRLYRDCR 357

Query: 439 ANSILLGSGNAM---VLDVLNLLEKG 461
             SI  G+   M   +   + +L +G
Sbjct: 358 ITSIGGGADEVMLSIICKTMGILPRG 383


>gi|225374494|ref|ZP_03751715.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM
           16841]
 gi|225213732|gb|EEG96086.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM
           16841]
          Length = 637

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 29/284 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P  K       GLTE   G+D A  T     +    Y L+G K F+++   +D +++ A 
Sbjct: 113 PCAKGEKLAAFGLTEPNAGSD-AGGTETTAVLEGDHYLLNGEKIFITNGGEADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS+AT +L F++     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKLGIRSSATRQLIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKR 357
            +  KI +  LD   + ++   + +A+     A+ YA+ R     I  D+PV     +  
Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIAQGAYESAVEYAKDR-----IQFDKPVAFQQGISF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A  I  A  L +  A   +E +    EAA A++       +   +A  V  +A++
Sbjct: 284 KIADMATKIRCARFLVYSAAERKEEHEPYGMEAAMAKM-------YASDIALEVCNDAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460
             GG+GY++   + R YR++   +I  G+     V+   N+L K
Sbjct: 337 IYGGAGYLKGTDVERMYRDAKITTIYEGTNEIQRVVIAANILGK 380


>gi|241111860|ref|XP_002399411.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215492973|gb|EEC02614.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 410

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 34/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++      D  Y ++G K W  S+   +A +++A V+       +  
Sbjct: 151 LSEPGNGSDAGAASTTAVLEGDH-YRINGTKAWITSAHEGEAAVVMATVDKSKKHKGISA 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           FLVP         GL   + + K+G R+++T  L F +      + LGD  +        
Sbjct: 210 FLVPM-----PTQGLTLGKKEEKLGIRASSTSYLIFEDCLIPKEYRLGDEGMG------F 258

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LDS  + ++G  + + +A     + Y+ +R   G  L     ++  +AD+ + +
Sbjct: 259 KIAMSVLDSGRIGIAGQALGIGQAALECALEYSGKRQSFGQSLHSFQAIQMKLADMEVRL 318

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D     ++EAA A++ A        + A  V  +A++ +GG GY+ 
Sbjct: 319 QSARLLTWRAAMLKDAGLKFTKEAAMAKLAAS-------EAATYVSHQAIQILGGMGYVT 371

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +    RHYR++    I  G+     L + N L K
Sbjct: 372 DMPAERHYRDARITEIYEGTSEVQRLVIANNLLK 405


>gi|67524609|ref|XP_660366.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4]
 gi|40744014|gb|EAA63196.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4]
 gi|259486321|tpe|CBF84066.1| TPA: glutaryl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_3G06040) [Aspergillus nidulans FGSC A4]
          Length = 424

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           + K  +A   GLTE   G+D  ++ +  ++     G+Y LSG K W  +SP+SD  I+ A
Sbjct: 151 LAKGKLAGCFGLTEPNHGSDPGSMETIAREHPTKKGVYLLSGSKTWITNSPISDILIVWA 210

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           +++  G++  F+V R      P  L    LKNK   R++ T  ++  +       +  D+
Sbjct: 211 KLQSTGKIRGFVVER--SKCPPGTLETPALKNKSALRASITGMIQLDDCPVPVENMFPDV 268

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
              TGP         L+SA + ++ G   +L + I  AR     R+   G  L    +++
Sbjct: 269 EGLTGP------FTCLNSARLGIAFGAMGALEDCIDRARTYALERKQFKGNPLAKYQLIQ 322

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD   D    T  + ++A   D  K   E       M  + K   C  A A      
Sbjct: 323 KKLADAVTDATYGTLAATQVARLKDAGKCTPE-------MISLVKRQNCDRALANSRTLQ 375

Query: 417 ECIGGSGYIEERSIARH 433
           E  GG+   +E  IARH
Sbjct: 376 EVFGGNAASDEYHIARH 392


>gi|72384108|ref|YP_293462.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72123451|gb|AAZ65605.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 378

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 39/306 (12%)

Query: 154 PSVTSA-----SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           PS+ +A      ++ L  T     +W P+I                 V     LTE   G
Sbjct: 84  PSIRNALGPIPQLLLLHGTSAQKDEWLPRI--------------AAGVTACFALTEPDAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +DI A+ +   K S   + L+G K ++S +   D F++ A+ +   G   V   L +   
Sbjct: 130 SDIGAMRTTAVK-SGNQWVLNGAKTYISNAERGDVFLVFAKTDKNKGRDGVSAFLVEPKT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLN----VSTGPVEDMKILIYLDS 320
            G         +G  +N    L F N       LLG+ N     +   + + ++    + 
Sbjct: 189 AGFSMSAPIRTMGFMTNGVYGLTFDNCKIPADNLLGEENRGFYYAVSGLNEARV----NV 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++ G +++   A+ Y++ R   G  L    V++  +AD+A++  AA  L    A   
Sbjct: 245 GCQALGGSQIAFEHALQYSKDRVTFGQPLSTHQVLQHMLADMAMEQHAARMLLLEAAWGL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   +++YA++       +C ++A  +  +A++  GG+GYI+   + R YRE    
Sbjct: 305 QTGVDVRLKSSYAKV-------FCTEVANRIADKALQIFGGAGYIKGMVVERVYRELRVM 357

Query: 441 SILLGS 446
            I  G+
Sbjct: 358 RIFEGA 363


>gi|24373247|ref|NP_717290.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24347481|gb|AAN54734.1|AE015614_1 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 385

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 16/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++  Q + + DG  Y +SG K F+S   S   +++    G+ G   +  
Sbjct: 124 LTEPGAGSDAASL--QTKAVPDGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           +       G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L  
Sbjct: 182 IAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  R
Sbjct: 240 GRINIATCSVGTAQAALERASQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R
Sbjct: 299 LA-AFKLDSGDPEGTAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 354 DVRVHQILEGTNEIMRL 370


>gi|319790823|ref|YP_004152463.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593286|gb|ADU34352.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 399

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 115 FGTEAQKQKFLPKLATGEWIGCFGLTEPDHGSDPGSMVTRAKKVPGG-YSLSGAKMWISN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+     
Sbjct: 174 SPIADVFVVWAKEVSESGTVGPIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDGV 232

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F     +  ++    GP         L+SA   +S   +  AE     A  Y   R   G
Sbjct: 233 FCPEENVFPEVQGLKGP------FTCLNSARYGISWGAIGAAEDCWHRARQYTLDRKQFG 286

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +I      S RL    DE  +  E       +  I K   C 
Sbjct: 287 RPLAANQLIQKKLADMQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCG 339

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            A  +   A + +GG+G  +E  +ARH
Sbjct: 340 KALDIARLARDMMGGNGISDEFGVARH 366


>gi|237801818|ref|ZP_04590279.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331024677|gb|EGI04733.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 393

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGSAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|169634201|ref|YP_001707937.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169152993|emb|CAP02047.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 406

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 33/270 (12%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           SP++D F++ A+    EG VG  C  +   LE G   GL    +  K+G R++ T E+  
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGDICGFI---LEKGW-EGLSAPAIHGKVGLRASITGEIVM 236

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
            N F        ++    GP         L+SA   ++   +  AE     A  Y   R 
Sbjct: 237 DNVFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRK 290

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K  
Sbjct: 291 QFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRN 343

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            C  A  +   A + +GG+G  +E  +ARH
Sbjct: 344 NCGKALDIARMARDMMGGNGISDEFGVARH 373


>gi|32141216|ref|NP_733617.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256786699|ref|ZP_05525130.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289770594|ref|ZP_06529972.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|24427171|emb|CAD55332.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289700793|gb|EFD68222.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 608

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 135/287 (47%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKAAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399
                 P ++R++           AL    A+  DE + +       S E A   ++ P+
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDEIQVKEANGEDASAEHALNDLLLPV 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + A   +A++++  GGSG+++E  I ++ R++  +++  G+
Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447


>gi|319949060|ref|ZP_08023156.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319437279|gb|EFV92303.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 605

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 41/308 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244
           PM +      + L+E   G+++A IT++ +   DG Y L G K ++S     M++  +  
Sbjct: 153 PMIQGRYTGTMCLSEPHAGSNLADITTRAEPQPDGTYRLFGQKMWISGGEHQMAENIVHL 212

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA+V G       +  F+VP+ L D     G  N +    L +K+G R           
Sbjct: 213 VLAKVPGSPAGTRGISLFIVPKFLVDDDGSIGERNDIVITGLNHKMGFRGTVNTMPTLGQ 272

Query: 294 ----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342
                       G+L+G+ N     +  M     L   + + +       +++ YAR R 
Sbjct: 273 GIHTPGGRPGAVGYLVGEENTGLKKMFTMMNEARLGVGLGATAIGYTGYLKSLDYARNRP 332

Query: 343 --HVSGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               +G        +L     ++R +      +  A AL    A   D+ K+ S E + A
Sbjct: 333 QGRPAGADPSTPQVMLTRHTDVRRMLLAQKSYVEGALALCLFCARLVDDEKTGSPEESTA 392

Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +        A++ +GG+GY  +  + +HYR++  N I  G+  
Sbjct: 393 AKTLLDVLTPIAKSWPSQWCLKANELAVQVLGGAGYTIDYDVEQHYRDNRLNPIHEGTHG 452

Query: 449 AMVLDVLN 456
               D+L 
Sbjct: 453 VQGQDLLG 460


>gi|154495110|ref|ZP_02034115.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC
           43184]
 gi|154085660|gb|EDN84705.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC
           43184]
          Length = 568

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRQGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+ L
Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457


>gi|218130260|ref|ZP_03459064.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697]
 gi|317473749|ref|ZP_07933030.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           eggerthii 1_2_48FAA]
 gi|217987544|gb|EEC53872.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697]
 gi|316910006|gb|EFV31679.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           eggerthii 1_2_48FAA]
          Length = 568

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|183980533|ref|YP_001848824.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M]
 gi|183173859|gb|ACC38969.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M]
          Length = 611

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLI 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHEGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A + +     A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAAHGVDAKLAVKINDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 LLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|302187073|ref|ZP_07263746.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 393

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWV-GLSAPAIHGKVGLRASITGEIVMDNVFVPEDNIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|299535046|ref|ZP_07048372.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           fusiformis ZC1]
 gi|298729542|gb|EFI70091.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           fusiformis ZC1]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 25/258 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +    I DG  Y ++G K ++++      I++  
Sbjct: 113 PLAKGETLGSFGLTEPNAGSDAGGTRTTA--IIDGDDYIINGEKCWITNAGYARQIIVTA 170

Query: 249 VEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           V G+   G  ++  ++   +  G+      +K+G R + T E+   N       LLGD  
Sbjct: 171 VTGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLENVRVPRTNLLGDEK 230

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                    + L  LD   +S++ + V +A+A     + +A+ R   G  +     ++  
Sbjct: 231 RGFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFK 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A++I  A  L  + A   D+ K   +EAA A++ A    +  C        +A++ 
Sbjct: 286 LADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQI 338

Query: 419 IGGSGYIEERSIARHYRE 436
            GGSGY++E  + RH R+
Sbjct: 339 HGGSGYMKEYDVERHLRD 356


>gi|295697788|ref|YP_003591026.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295413390|gb|ADG07882.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 50/280 (17%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ + +     GLTE   GTD A + +   +  D  Y L+G K F+++   +D +++ A 
Sbjct: 113 PLAEGTKIGAYGLTEPGAGTDAANLRTTAVREGDH-YVLNGSKIFITNGGEADIYVVFAT 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---------- 293
            +       +  F+    LE G P G  + + + K+G RS+ T+EL F N          
Sbjct: 172 TDREKRHRGISAFI----LEKGMP-GFHFGKKEKKMGLRSSPTMELVFDNCIVPAENRLG 226

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
              FGF +               ++ LD     ++   V +A+     A+ +A+ R   G
Sbjct: 227 EEGFGFKIA--------------MMTLDGGRNGIAAQAVGIAQGALEAAVAHAKEREQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +AD+A  + AA  L+++ A   D      + +A A++ A  T  +   
Sbjct: 273 KSIGQFQAIQFKLADMATRVEAARLLTYQAAWLEDRGLPYGKASAMAKMYASDTAMY--- 329

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               V  EA++  GG GYI E  + R  R++    I  G+
Sbjct: 330 ----VTTEAVQIFGGYGYIREYPVERFMRDAKITQIYEGT 365


>gi|255994680|ref|ZP_05427815.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989]
 gi|255993393|gb|EEU03482.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A   ++ ++  D  + L+G K F+++   +D F+++A  +   G   +
Sbjct: 123 FGLTEPNAGTDAAGQQTRAEQDGD-FWVLNGAKVFITNGGYADVFVVMAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVED 311
              + +    G    + ++K+G  +++T EL F N         G L     V+   ++ 
Sbjct: 182 TAFIVEKGDEGFSIGKTEDKMGICASSTTELIFQNCKIPKDRMLGGLGKGFKVAMSTLDG 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I I   +  ++   + V+    + Y + R   G  L     ++  +AD+A  I AA  
Sbjct: 242 GRIGIASQALGIAQGALDVT----VEYMKSRKQFGKKLSQMQALQFEVADLATRIEAARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A+  +     S+++A A++ A  T       A  V  + ++  GG GY ++  + 
Sbjct: 298 LVYQAADMKERGLPYSKQSAMAKLFAAET-------AMHVTTKCVQLHGGYGYTKDYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKITEIYEGT 365


>gi|253700014|ref|YP_003021203.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251774864|gb|ACT17445.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 385

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 49/293 (16%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K + P+I S EY             A    LTE   G+D A +T+      D  + L+G
Sbjct: 108 KKKYIPRICSGEYP------------AGAFALTETGAGSDPAGMTTSALAEGDE-WVLNG 154

Query: 231 HKWFLSS-PMSDAFIMLA-----QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            K F++S P +  F++ A       +G+ + CFLV    E G+P GL   + + K G  +
Sbjct: 155 SKIFITSAPYAGVFVVWAVTDKDAAKGKGISCFLV----EQGAP-GLVIGKQEEKTGQHA 209

Query: 284 NATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
           +AT E+ F N       L+G LN    ++ G +   +I I          G+ V LA   
Sbjct: 210 SATCEVIFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGI-------GSLGLGVGLAAMD 262

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R   G  +     ++  +A+   ++ AA  L  + A   D  KS ++EA+ A
Sbjct: 263 FATRYASERVQFGQKITGFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGKSFAKEASMA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ A       C         A++ +GG GY  +  + R+ R++   +I  G+
Sbjct: 323 KMYATEAANRACY-------SAVQMLGGYGYTRDFPVERYARDARITAIYEGT 368


>gi|187918808|ref|YP_001887839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717246|gb|ACD18469.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 398

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D  A+ +  ++  D  Y L G K F++ +P++D F ++A+ E      G 
Sbjct: 122 FALTEPDAGSDATALRTTARRDGDH-YILDGSKCFITNAPIADLFTVMARTELAKPGAGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  FLV R    G+P GL      +K+G   +   ++ F         L+G      G  
Sbjct: 181 ISAFLVER----GTP-GLSTSAPYDKMGQAGSPVGDVVFEGCRVPAANLIGGKE-GMGFR 234

Query: 310 EDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             MK+L    I+L +A+ +   MR+ L EA+ Y  RR   G  + +  +++  IA+   +
Sbjct: 235 TAMKVLNKQRIHL-AALCTGPAMRM-LEEAVAYTSRREQFGKPVAEFQLVQALIAECQTE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA ++    A   D  +  + EA+       + K +  +M   V   A++ +GG GY+
Sbjct: 293 IYAARSMILETARKRDAGEDVALEAS-------MCKMFASEMCGRVADRAVQMLGGRGYL 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              ++ R YR+  A  I  G+     L++  +
Sbjct: 346 AGNAVERFYRDVRAFRIYEGTTQIHQLNIAKI 377


>gi|296167526|ref|ZP_06849878.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897148|gb|EFG76757.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 611

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+++         +E  ++++       +++ +      A+ YA+ R V G         
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                 +   P ++R++           AL    A   D A + +     A +       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATYQDAAVAEAVHGVDAELAVKVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++  GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|148685766|gb|EDL17713.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_a
           [Mus musculus]
          Length = 480

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 31/275 (11%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           +F +      KA      V   LG   L+E   G+D  A+ ++  K S   Y L+G K W
Sbjct: 164 LFRKHASEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMW 222

Query: 234 FLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +  ++ F++ A V+   G     CFLV R  E     G    + +NK+G R+++T +
Sbjct: 223 ISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTE-----GFQIGKRENKMGIRASSTCQ 277

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR 342
           L F N     + + N+        K  I  L+   + ++   + LA+      I Y + R
Sbjct: 278 LTFENV---KVPETNILGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 334

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + D   ++  +A +A  + A   L++  A   +  +   +EA+ A       KY
Sbjct: 335 MQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIKEASMA-------KY 387

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  ++A    ++ +E +GG GY ++  + + +R++
Sbjct: 388 YASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDA 422


>gi|15828376|ref|NP_302639.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221230853|ref|YP_002504269.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|3063885|emb|CAA18570.1| putative acyl-coA dehydrogenase [Mycobacterium leprae]
 gi|13093806|emb|CAC32094.1| acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219933960|emb|CAR72662.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 611

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++     D  + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVHQEDDSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           GD++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GDVHDGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A + +     A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAVHGVDAKLAVKINDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPLVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|23098319|ref|NP_691785.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776545|dbj|BAC12820.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 398

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+AA+ S   K  D  Y L+G K W     ++D FI+ A 
Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAALQSTAVKQGDH-YILNGQKTWISLCDIADHFIVFAY 171

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            + R      +  F+V R  E     G   + +K K G RS  T E+ F +     +   
Sbjct: 172 TKDRSEKHKGISAFIVERSWE-----GFSSKAIKGKHGIRSGNTGEIFFDH---IKVPKE 223

Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMK 356
           N+     E  KI +  LD+   +V+   V      +  ++ Y   R   G  +    +++
Sbjct: 224 NLLGKEGEGFKIAMSALDNGRFTVAAGAVGQIMACIEASVKYCHERETFGKEIGKHQLVQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IA +      +  L +R     ++ K  + E + A       K+  C  A     +A+
Sbjct: 284 QMIAKMEAGYQMSKLLVYRAGELKNQGKRNTRETSLA-------KWQACDFANKAADDAV 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  G  GY +E  + R  R S A  I  G+
Sbjct: 337 QIHGAYGYSDEYPVERFLRNSKAPVIYEGT 366


>gi|329955335|ref|ZP_08296243.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056]
 gi|328525738|gb|EGF52762.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056]
          Length = 568

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|331698556|ref|YP_004334795.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953245|gb|AEA26942.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 379

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 24/270 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC- 255
           + +TE   G+D+A I S  +   DG + L G K F+++  ++D  ++ A+    GR G  
Sbjct: 123 IAVTEPDTGSDVARIRSTARPADDG-WVLDGRKMFITNAGIADVLVVAARTGEPGRRGVT 181

Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F VP     G+P GL + R   K+G  S+ T E+           ++G ++     + +
Sbjct: 182 LFEVPA----GTP-GLSFSRPLPKMGWHSSDTREVVLDGVRVPSDAVVGAVDRGFYQIME 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  +  A M +   +  L  A+ Y R R   G  L     ++  +A + +++ AA  
Sbjct: 237 GFQLERIALAAMGLGHAQECLDLALGYTREREAFGAPLTHLQTIRHRLALMEIELDAARL 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ + A   D     +  +  AR      KY     A  ++ +A++  GG+G++EE  +A
Sbjct: 297 VTHQAAARLDSGHPEAGRS-VAR-----AKYLAAVAANRIVDDAVQLFGGAGFVEESPVA 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           RHYR+  A  + +G G   +   L +L +G
Sbjct: 351 RHYRD--ARILRIGGGTDEIQ--LEILTRG 376


>gi|228993442|ref|ZP_04153352.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus
           pseudomycoides DSM 12442]
 gi|228766264|gb|EEM14908.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus
           pseudomycoides DSM 12442]
          Length = 257

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 46/283 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GC 255
           +TE   G+D+A+I +  +K  D  Y ++G K F+++ + +D  I++ + +  +     G 
Sbjct: 1   MTEPGAGSDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGM 59

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMK 313
            L+  +LE G       ++LK KIG  S  T EL F         D+ V    +  E+ K
Sbjct: 60  SLL--VLERGMEGFKRGKKLK-KIGLHSQDTAELIFE--------DVKVPASNLLGEEGK 108

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              YL   +     + V++A         H++   + ++    ++I+D          + 
Sbjct: 109 GFYYLMEKLQQ-ERLIVAIAAKTAAEVMLHITKNYVQERKAFGKSISDF-------QTVQ 160

Query: 374 FRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           FRLA  + E            A   + E    ++   + K+W   +A  V AE ++  GG
Sbjct: 161 FRLAEMYTEIEIGRTFVDDCIANHMNGENIVTKV--SMAKWWLTDLAKKVSAECVQLHGG 218

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GY+EE  IAR YR+ P ++I  G+   M     N++ KG  L
Sbjct: 219 YGYMEEYEIARRYRDIPVSAIYAGANEIM----KNIIAKGMGL 257


>gi|33592543|ref|NP_880187.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33596196|ref|NP_883839.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33601607|ref|NP_889167.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33572189|emb|CAE41735.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33573199|emb|CAE36854.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
 gi|33576044|emb|CAE33123.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|332381961|gb|AEE66808.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 384

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 46/319 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MV     P V + W P + S E   +               LTE   G+D  ++ ++ ++
Sbjct: 96  MVGQWARPAVREQWGPLLASGEKLAS-------------YCLTEPNAGSDAGSLATRAER 142

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
             D  Y L+G K F+S    +D  +++A+      G V  F VP         G+ Y R 
Sbjct: 143 QGDD-YVLNGAKAFISGGGDTDLLVVMARTGGDGPGGVSAFAVP-----ADAAGIAYGRK 196

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS 331
           + K+G  S +T  + F         +LG+      P E  KI +  LD   +++    V 
Sbjct: 197 EEKMGWNSQSTRPITFEQVRVPASHMLGE------PGEGFKIAMKGLDGGRINIGTCSVG 250

Query: 332 LAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            A+    A RR++      ++ +     ++  +AD+A  + AA  +  RLA    +A S 
Sbjct: 251 AAQGAMDAARRYMDERRQFNRKLAQFQALQFKLADMATHLVAARQM-VRLAACKLDAGS- 308

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A A     + K +   M   +  +A +  GG GY+ +  + R  R++  + IL G+
Sbjct: 309 ----ADASTYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDTRVHQILEGT 364

Query: 447 GNAM-VLDVLNLLEKGTNL 464
              M V+    LLEKG ++
Sbjct: 365 NEIMRVIVARQLLEKGADI 383


>gi|116049479|ref|YP_791718.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390097|ref|ZP_06879572.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584700|gb|ABJ10715.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 382

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + L +TE  GG+D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   
Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL +    G    R   K+G  ++ T EL F +       L+G  N     +     
Sbjct: 184 ISLLLVEKGTAGFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+M+    +++L E++ +AR R   G  +    V++  +A++A  +  +   ++
Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A      KS  +E + A       K +   +A  +  +A++ +GG GY+ E  + R Y
Sbjct: 304 RQAAKMAAGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356

Query: 435 RESPANSILLGSGNAM 450
           R++   SI  GS   M
Sbjct: 357 RDNRILSIGGGSREIM 372


>gi|332187101|ref|ZP_08388841.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332012801|gb|EGI54866.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 388

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 146/310 (47%), Gaps = 28/310 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  +L  +   H +       R   P  KA   P   +   +G L ++E 
Sbjct: 73  HVVAIEEVSRASASLGLSYGAHSNLCVNQIRRWGSPEQKAKYLPGLISGEHVGSLAMSEV 132

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLE 263
             G+D+ ++  +  ++  G + L+G K W  ++P +D  ++ A+  EG  G   +   L 
Sbjct: 133 SAGSDVVSMKLRATQVEGG-WRLNGTKFWITNAPYADTLVVYAKTGEGSRG---ITAFLI 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIY-LDSA 321
           D    G    +  +K+G R + T EL F++ F   + D  V  GPV   + +L+  LD  
Sbjct: 189 DKDMAGFSIGQKIDKMGMRGSPTAELVFNDCF---VADEQV-MGPVNGGVGVLMSGLDYE 244

Query: 322 IMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              ++G+++ + +A     + Y R R   G  + +  +++  IAD+ + + +A A  + +
Sbjct: 245 RAVLAGIQLGIMQACLDVVVPYVRERRQFGRAIGEFQLIQAKIADMYVALNSARAYVYAV 304

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A S D  ++   +AA A ++A        + A  V  EA++ +GG+GY ++  + R  R+
Sbjct: 305 ARSCDAGRTTRFDAAGAILLA-------SENAVKVSLEAIQALGGAGYTKDWPVERFARD 357

Query: 437 SPANSILLGS 446
           +    I  G+
Sbjct: 358 AKLLDIGAGT 367


>gi|332716278|ref|YP_004443744.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325062963|gb|ADY66653.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 417

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 23/285 (8%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           ++H+ W  +   R Y P   +     S+A    ++E   G+D+ ++  +  +  D +Y L
Sbjct: 132 QIHR-WGTEEQKRRYLPKLVSGEHVGSLA----MSETEAGSDVVSMRLKADRKGD-VYVL 185

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K W  +   +D  ++ A+ +   G   +   L + S  G    +  +K+G R + T 
Sbjct: 186 NGTKMWITNGHEADTLVVYAKTDMSAGARGITAFLIEKSFKGFRPAQKLDKLGMRGSPTS 245

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341
           ELEF+        +LG LN   G    M  L Y + A+++   V  M+ ++   + YAR 
Sbjct: 246 ELEFTECEVPEENILGRLN--DGVTVLMSGLDY-ERAVLAAGPVGIMQAAIDLVLPYARE 302

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +ADI   + A+ A  + +A + D  +   ++AA A + A    
Sbjct: 303 RKQFGKPIGEFQLVQGKLADIYSAMNASRAYVYAVARACDNGRITRQDAAGAILFA---- 358

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + A  V  +A++ +GGSGY+ E    R  R++    I  G+
Sbjct: 359 ---AERATRVALDAIQLLGGSGYVNESPAGRLLRDAKLYEIGAGT 400


>gi|30262357|ref|NP_844734.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47527647|ref|YP_018996.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185200|ref|YP_028452.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|65319648|ref|ZP_00392607.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|165870535|ref|ZP_02215189.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167633117|ref|ZP_02391443.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167639599|ref|ZP_02397869.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170687028|ref|ZP_02878247.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170706639|ref|ZP_02897098.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177649348|ref|ZP_02932350.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190565496|ref|ZP_03018416.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227814837|ref|YP_002814846.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229602743|ref|YP_002866690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254684931|ref|ZP_05148791.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254737378|ref|ZP_05195082.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743437|ref|ZP_05201122.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254751693|ref|ZP_05203730.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254760212|ref|ZP_05212236.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30256988|gb|AAP26220.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47502795|gb|AAT31471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179127|gb|AAT54503.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164713690|gb|EDR19213.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167512308|gb|EDR87684.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167531929|gb|EDR94594.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170128370|gb|EDS97238.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170669079|gb|EDT19823.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172084422|gb|EDT69480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190563523|gb|EDV17488.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227005385|gb|ACP15128.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229267151|gb|ACQ48788.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 569

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PKI S E+              IG   LTE   G+D  +  +      DG 
Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K W  ++ M+D +++ A+    +  F+V R  E G   GL  +  K  I   S
Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228

Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            AT+ LE       N  G       V  G    + IL +  L  A  ++   + ++  ++
Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394
            Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    +  
Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I   + K    +    ++ EA++  GG GY++E  +   YR++  + I  G+     
Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINR 402

Query: 452 LDVLNLLEK 460
           L V  +L K
Sbjct: 403 LTVAKMLMK 411


>gi|296536689|ref|ZP_06898753.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296262980|gb|EFH09541.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 397

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 19/279 (6%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQK  +    GLTE   G+D A++ ++ +K+ DG Y +SG K W  +SP++D F++ A+ 
Sbjct: 132 MQKGELVGCFGLTEPDAGSDPASMRTRAKKV-DGGYLVSGSKTWITNSPIADVFVVWAKD 190

Query: 250 E-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--T 306
           E G V  +++ + ++     GL   +++ K   R++ T  +     F      L+V    
Sbjct: 191 EAGDVRGYVLEKGMK-----GLSAPKIEGKFSLRASITGMIMMEEVFVPEENKLDVKGLK 245

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP   +    Y   A  ++         A  Y   R + G  L +  ++++ +AD+  +I
Sbjct: 246 GPFSCLNRARY-GIAWGALGAAEFCWHAARTYTLERKMFGRPLANTQLIQKKLADMQTEI 304

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                   RL   FDE +   E       M  + K   C  A  +   + +  GG+G  +
Sbjct: 305 TLGLQSVLRLGRLFDEHRVTPE-------MISLCKRNSCGKALDIARMSRDMHGGNGIAD 357

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           E  + RH     A +   G+ +   L +L   + G + F
Sbjct: 358 EYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLSAF 395


>gi|118472185|ref|YP_885879.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           smegmatis str. MC2 155]
 gi|118173472|gb|ABK74368.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           smegmatis str. MC2 155]
          Length = 395

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A MV    T    K W P++ S E                   LTE   G+D AA+ ++ 
Sbjct: 95  AWMVDTYGTEDQRKTWVPRLASME-------------TIASYCLTEPGAGSDAAALRTRA 141

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y L G K F+S +  SD ++++A+  G     +   ++E  +P GL +   + 
Sbjct: 142 VKDGDH-YVLDGVKQFISGAGTSDLYVVMARTGGEGPRGISTFIVEKDTP-GLSFGADEQ 199

Query: 278 KIGNRSNATVELEF-----------SNT----FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           K+G  +  T ++ F            NT    FG  +  LN              ++ A 
Sbjct: 200 KMGWNAQPTAQVIFEGVRVPAEALLGNTEGTGFGIAMNGLNGGR-----------INIAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G + +  +A+ Y   R   G  L+D+P ++  +AD+A  +  +  L +R A++ D 
Sbjct: 249 CSLGGAQAAYDKAVGYLADRQAFGAALLDEPTIRFTLADMATGLETSRNLLWRAASALDA 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                        +  + K +       V   A++  GG GY+ E  + +  R+   + I
Sbjct: 309 NHPDKV------TLCAMAKRYVTDTCFDVADSALQLHGGYGYLREYGLEKIVRDLRVHRI 362

Query: 443 LLGSGNAM 450
           L G+   M
Sbjct: 363 LEGTNEIM 370


>gi|66048238|ref|YP_238079.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|289677381|ref|ZP_06498271.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5]
 gi|63258945|gb|AAY40041.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|330937471|gb|EGH41436.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330976260|gb|EGH76322.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 393

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|51892709|ref|YP_075400.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856398|dbj|BAD40556.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 381

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVG- 254
            GLTE   G+D AA  +   +  DG + L+G K F+++     +I+   V    +G  G 
Sbjct: 125 FGLTEPGAGSDAAATKTTAVRDGDG-WVLNGSKVFITNANYCGYIVCTAVTRPGQGHRGI 183

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP    + +P G        K+G RS+ T  L F N    L  D  +        +
Sbjct: 184 SAFIVP----NPTP-GFTIGPAYEKMGLRSSDTRPLFFDNVR--LPADALLGREGEGFRQ 236

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   +S+  M V +A+     A+ YA++R   G  +     ++  +AD+A++I  
Sbjct: 237 FMATLDGGRISIGAMAVGIAQGALDAALAYAKQRVQFGQSISKFQAIQFKLADMAMEIEL 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  + A   D+ +  + EAA A++ A  T             +A++  GG+GY+E+ 
Sbjct: 297 ARNMVLKAAWLKDQGRPFTREAAMAKLFASETAVRAAN-------QAIQIHGGAGYMEDL 349

Query: 429 SIARHYRESPANSILLGS 446
            ++R +R++    I  G+
Sbjct: 350 PVSRFWRDAKLTEIGEGT 367


>gi|313897821|ref|ZP_07831362.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2]
 gi|312957356|gb|EFR38983.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++   +D +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVKDGDDYILNGTKIFITNAGEADVYVIFAMTDKTKGTHG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           +   ++E G P G    + + K+G R +AT EL F+N   +   LLG         +  K
Sbjct: 181 ISAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNVRLSKDHLLGQEG------KGFK 233

Query: 314 ILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           I      A+M++ G R+ +A            E + Y + R   G  +      +  +AD
Sbjct: 234 I------AMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA  L +  A   ++    S EAA A++ A        ++A  V  +A++ +GG
Sbjct: 288 MQVKTDAARWLVYDAAMKKEKGLPYSVEAAKAKLFA-------AEVAMEVTTKAIQLMGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY  +  + R +R++    I  G+
Sbjct: 341 YGYTRDYPVERMFRDAKITEIYEGT 365


>gi|294782903|ref|ZP_06748229.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294481544|gb|EFG29319.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 39/292 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++   +  +++ A  +   G   +   ++E G+P G    + + K+G R +AT EL
Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVESGTP-GFSIGKKEMKLGIRGSATCEL 214

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334
            F N       LLGD        +  KI      A+M++ G R+ +A            E
Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDE 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI+YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A+
Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|163734480|ref|ZP_02141920.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392488|gb|EDQ16817.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 369

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 45/322 (13%)

Query: 160 SMVALMTT------PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
            +V L+TT       +  +D W P I +            KT VA    +TE   GTD++
Sbjct: 74  GLVELITTLLVAHGTQAQRDMWLPDILA-----------AKTKVA--YCITEPEAGTDVS 120

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            I +    + DG+ + L+G K W  ++P++D   +LA+ +   G   +     D   +G+
Sbjct: 121 GIRTTA--VRDGVGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFAVDLHADGV 178

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                ++K+G R++    L F +       LLG    + G    M ++  LD   + ++ 
Sbjct: 179 ARGPKEHKMGQRASPVGPLHFDDVKLPAHALLG----AEGRGFHM-MMSVLDKGRVGIAA 233

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V + +A     + YA +R      + +   ++  +ADIA D+ AA  L+   A+  D 
Sbjct: 234 LAVGIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDI 293

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++  + A+  A         MA A  A+A++  GGSGYI+   + R YR++    I
Sbjct: 294 GADATKACSMAKCFA-------GDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQI 346

Query: 443 LLGSGNAMVLDVL-NLLEKGTN 463
             G+     + +   LL KG +
Sbjct: 347 YEGTNQIQRMIIARELLAKGAD 368


>gi|119714318|ref|YP_921283.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119534979|gb|ABL79596.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 387

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 26/264 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGR--- 252
             LTE   G+D +A+ ++ +K+  G Y L+G K F+S   +D  I+ A     + GR   
Sbjct: 121 FALTEPGAGSDNSAMRTRAEKVEGG-YVLNGAKHFISHGNADFAIVFAVTGPPLRGRTPQ 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           V  FLV R    G+P G    + +  +G       EL F N F   + D  V   P E +
Sbjct: 180 VTAFLVDR----GTP-GFTVGKAQRMMGWSGMEECELVFENCF---VPDDQVLGTPGEAL 231

Query: 313 KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           ++ +       L  A   V  M   L  +I Y R R V    L D+  ++  +A+ A++ 
Sbjct: 232 RLGLASVAQRRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEP 291

Query: 367 AAATALSFRLANSFDEAKSRSE-EAAYARIMA---PITKYWCCKMAPAVIAEAMECIGGS 422
             A   +++ A   DEA++    E   +R+ A    I K    +    V   A++  GG 
Sbjct: 292 YLAREATYKAARLCDEARAAGRSEIELSRLFAREISIAKLHATRALNRVADVAVQVHGGM 351

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  E  + R YR++    I+ G+
Sbjct: 352 GWCREYPVERLYRDARVFRIIEGA 375


>gi|239501349|ref|ZP_04660659.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB900]
          Length = 403

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLSGAKMWITN 177

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370


>gi|254428436|ref|ZP_05042143.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194605|gb|EDX89564.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 387

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMGLRADKQGDH-YVLNGNKMWITNGPDAHTYVIYAKTDTSAGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + NV     E +K+L+  
Sbjct: 187 TAFIVERGFAGFSQAQKLDKLGMRGSNTCELVFEDCH---VPEENVLGTVGEGVKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG     M+  +   + Y   R   G  + +  +M+  IAD+ + + A+ + 
Sbjct: 244 LDYERTVLSGGATGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIADMYVMLNASRSY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +C + A  +  EA++ +GG+GYI E    R
Sbjct: 304 LYNVAKACDRGETNRKDAAGVIL-------YCAENATKMALEAIQTLGGNGYINEYPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|148652811|ref|YP_001279904.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571895|gb|ABQ93954.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 601

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 67/357 (18%)

Query: 148 AGHLMS--------PSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           AG+ M+        P +T+A++  LM      V + + P++ S ++  T           
Sbjct: 114 AGYFMAANPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFTGT----------- 162

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
             + LTE   G+ +A I +      DG Y + G K ++S    +       ++LA+V G 
Sbjct: 163 --MALTEPHAGSSLADIRTTATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGG 220

Query: 253 ------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
                 +  F VP  RL   G P   N +    L +K+G R   +  L F +     G+L
Sbjct: 221 PAGVKGISLFAVPKYRLDASGKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYL 280

Query: 299 LGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILID 351
           +G+++     +  M    +I +   +A++   G + SLA    YA+ R    V+  +  D
Sbjct: 281 IGEVHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLA----YAKDRLQGRVAPHLKPD 336

Query: 352 QP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            P              + ++A ++  + +    +      N+ D+   +   +    ++ 
Sbjct: 337 DPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLT 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           P+ K W  +  P      ++ +GG+GY  E    + +R++  N I  G+     LD+
Sbjct: 397 PVLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDL 453


>gi|300711832|ref|YP_003737646.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125515|gb|ADJ15854.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 126/262 (48%), Gaps = 36/262 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           ++E   G+++A + ++ ++  D  + + G+K W  +  ++D  +++A+ +   G      
Sbjct: 124 ISEPAHGSNVAGMETRAERDGDE-WVIDGNKMWITNGTVADVAVVMAKTDPDAGKRGITA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED 311
           FLVP   E     G   +++ NK+G R++   EL        LL D++V      G V +
Sbjct: 183 FLVPTDTE-----GFRAEKIDNKLGIRASDLAEL--------LLDDVHVPEENVIGEVNE 229

Query: 312 --MKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              +++ +  S  +SV+   V      L  A+ YA  R      + +   ++  +A++A 
Sbjct: 230 GFYQLMNFFGSGRVSVAAQAVGAAQGALDAALEYAGEREQFDRKIAEFQAIEHKLAEMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA +L++R A+   +   R+     A   A + K +  + A  V  E+++  GG+GY
Sbjct: 290 NVEAARSLTYRAASEVTDGDQRT-----AMKFASMAKLFASEHAVDVADESIQVHGGAGY 344

Query: 425 IEERSIARHYRESPANSILLGS 446
           + + +  R+YR++    I  G+
Sbjct: 345 VTDHAAERYYRDARITKIYEGT 366


>gi|302541026|ref|ZP_07293368.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458644|gb|EFL21737.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 390

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257
           L+E   G+D AA+T++  +  D      G  W     ++D + +LA+        +  FL
Sbjct: 133 LSEPSSGSDAAALTTRATREGDTWTLEGGKAWITHGGIADFYTVLARTGPERTRGISAFL 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G   + T ++         + D        +   I L 
Sbjct: 193 VP-----GDAPGLSAAAPERKMGMNGSPTAQIHLDRV---RVPDTRRIGEEGQGFAIALS 244

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++   + LA     EA+ Y  +R   G  + D   ++  +AD+A  I A  A
Sbjct: 245 ALDAGRLGIAACAIGLAQAALDEALAYTAQRRQFGRPIADFQGLRFMLADMATQIEAGRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S++AA A       K +C   A  V  +A++  GG GY  +  + 
Sbjct: 305 LYLAAARLRDAGRPFSKQAAMA-------KLFCTDTAMRVTTDAVQLFGGYGYTADFPVE 357

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I+ G+
Sbjct: 358 RYMREAKVLQIVEGT 372


>gi|240172395|ref|ZP_04751054.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 460

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 56/329 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P     WAP+ F    D      ++  ++AI    +E  GG+D+  + ++ +
Sbjct: 96  SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTRAR 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL   
Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEDLGHRGQALFVVP----GGTP-GLELV 199

Query: 274 RLKNKIGNRSNATVELEF-------SNTFG--------------FLLGDLNVST---GPV 309
           R  +K+G R++ T EL F       +N  G               + G    S+   G  
Sbjct: 200 RKLDKLGCRASHTAELRFNGARVPGANLLGGQEKLEHKLAKARELVAGGKRSSSATLGTF 259

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  + ++    A  ++   R +L  A  YA  R   GG +ID   +   +AD+A  I AA
Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATSYATEREAFGGPIIDNQGIAFPLADLATQIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R   S+  A   S    + R    ++K    ++A      A++ +GG GYI +  
Sbjct: 316 RLLTWR--ASWMAANGVS----FERGEGSMSKLAASEIAVKATERAIQTMGGWGYITDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + + YR++   +I  G+     + + N L
Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVISNAL 398


>gi|229087835|ref|ZP_04219949.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228695471|gb|EEL48342.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +D +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAIK-KDDHYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   PVE++        
Sbjct: 188 FIVEKDTPGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +        + +LA A+ YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAKAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKICEIYEGT 369


>gi|226361798|ref|YP_002779576.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240283|dbj|BAH50631.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 47/313 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T     +W P+I S E            ++A   GLTE   G+D   + ++  +  D  Y
Sbjct: 103 TEEQKHEWLPRIASGE------------ALAC-FGLTEPDNGSDPGNLKTKAVRSGD-EY 148

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            ++G K F+++   +   ++ A+  G     V  FLVP         G   + +  K+G 
Sbjct: 149 VINGSKIFITNGTWAKLCLVFARTGGPGPKGVSAFLVPT-----DTPGFESREIHGKLGL 203

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334
           R  AT EL F++       LLG    S G  +   I ++ LD   +SV    V + +   
Sbjct: 204 RGQATAELSFTDVRVPASCLLG----SEG--QGFSIAMHSLDKGRVSVGAGCVGIIQGCL 257

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ YAR R      L    +++  IAD+++D  A   L++R A+  +  +     A+ 
Sbjct: 258 EAAVDYARERTQFDRPLASFQLVQDLIADMSVDTDAGRLLTWRAADLIERGEPFGTAASK 317

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       KY+C + A      A++  GG GY++E  +A++ R++   ++  G+     L
Sbjct: 318 A-------KYFCSEAAVRAANNAIQLFGGYGYVDEYPVAKYMRDARVMTLYEGTSQIQKL 370

Query: 453 DVLNLLEKGTNLF 465
            ++   E G + F
Sbjct: 371 -LIGRAETGISAF 382


>gi|217968860|ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506187|gb|ACK53198.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 395

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+ DG + LSG K W  +
Sbjct: 116 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGFSLSGSKMWITN 174

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG++  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229

Query: 296 GFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349
              + + N     V  +K     L+SA   ++   +  AEA +     Y   R+  G  L
Sbjct: 230 ---VPEENAFP-TVRGLKGPFTCLNSARFGIAWGALGAAEACYETARQYTMDRNQFGRPL 285

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++++ +AD+  +I        R+    DE  +  E       +  I K   C  A 
Sbjct: 286 AANQLIQKKLADMLTEITLGLQAVLRVGRMKDEGIAPVE-------ITSIIKRNSCGKAL 338

Query: 410 AVIAEAMECIGGSGYIEERSIARH 433
            +   A + +GG+G  +E  +ARH
Sbjct: 339 DIARMARDMLGGNGISDEYPVARH 362


>gi|326317408|ref|YP_004235080.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374244|gb|ADX46513.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 388

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 30/263 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254
           LTE   G+D A++ ++ ++  D  Y ++G K F+S   S D  +++A+        G + 
Sbjct: 124 LTEPGAGSDAASLKTRAERSGDA-YVINGSKAFISGAGSTDVLVLMARTGAPDSGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTG 307
            F VP         G+ Y + + K+G  S  T  + F N       LLG       ++  
Sbjct: 183 AFAVP-----ADAAGIHYGKKEEKMGWNSQPTRTISFDNVHVPANHLLGAEGEGFKIAMK 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  SV   + +L  A  Y + R   G  +     ++  +AD+A ++ 
Sbjct: 238 GLDGGRINI----ATCSVGAAQGALNAAQQYMQDRRQFGKAIASFQALQFKLADMATELV 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA S  +A +R      A     + K +       V+ EA++  GG GYI E
Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFDVVNEALQLHGGYGYIRE 347

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + R  R++  + IL G+   M
Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370


>gi|24213260|ref|NP_710741.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658836|ref|YP_002922.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24193991|gb|AAN47759.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45602081|gb|AAS71559.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 557

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 30/278 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------- 250
           G+ +TE   G+D+A ++    K ++G + ++G K W   +  ++  ++L + E       
Sbjct: 278 GIMVTEPNYGSDVAGVSVTA-KPANGGWVINGVKTWCTFAGYANLLLILCRTESDPSLKH 336

Query: 251 -------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLL 299
                       F            G    +    IG R   + E+ F N F      L 
Sbjct: 337 KGLSILLAEKPTFTGHEFTYTQPEGGKIEGKAIGTIGYRGMHSFEVSFDNYFVPAENLLG 396

Query: 300 GDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           G+     G    M+      + +A  +   M+ +L  A+ YAR R V    + +  + K 
Sbjct: 397 GEAGRGKGFYFQMEGFAGGRIQTAARAHGVMQAALEAALRYARERAVFQKPIYEYNLTKY 456

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA +A+ + A+   +  +AN  D  K + E        A + K++  K+A  V  EAM+
Sbjct: 457 KIARMAVILQASRQYANHVANLLDNHKGQME--------ATLIKFYASKVAEWVTREAMQ 508

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             GG GY EE +++R++ ++   SI  G+   M L V+
Sbjct: 509 IHGGMGYAEEYAVSRYFVDARVFSIFEGAEEVMALRVI 546


>gi|50084768|ref|YP_046278.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530744|emb|CAG68456.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 375

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 34/287 (11%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + E       P+ +  +     LTE   G+D AAI ++  K  D  + ++G K F++
Sbjct: 98  KFGTEEQKQKYLVPLAQGEMIGAFALTEPHTGSDAAAIKTRAIKQGDE-WIINGAKQFIT 156

Query: 237 SPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQ--RLKNKIGNRSNATVE 288
           S  +   I++  V     G+ G   F+VPR         L Y+  R + K+G  ++ T +
Sbjct: 157 SGHNAGVIIVFAVTDPNAGKKGLSAFIVPR-------ETLGYEVIRTEEKLGLHASDTCQ 209

Query: 289 LEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +  ++       +LG     L ++   +E  +I I    A  +V   R +L EA  YA+ 
Sbjct: 210 IALTDVRVHHSLMLGQEGEGLKIALSNLEGGRIGI----AAQAVGLARAALEEATKYAKE 265

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +   +   +A +A +I AA  L    A   +  K    EA+ A++      
Sbjct: 266 RVTFGKPIFEHQALAFRLASMATEIEAARQLVHYAARLKEAGKPCLNEASMAKL------ 319

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +  +M   V + A++  GG GY+++  I R YR++    I  G+ +
Sbjct: 320 -FSSEMVERVCSAALQIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365


>gi|152995599|ref|YP_001340434.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150836523|gb|ABR70499.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 601

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 70/397 (17%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  + L  T    + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTIELHGTDEQKQTYLTKLVSGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLKTKAEPQADGSYAITGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+   DGS      N +    +++K+G   NAT  + F    GFL+G+ N     +    
Sbjct: 233 PKHNVDGSGEIADRNQVSCGSIEHKMGIHGNATCVMNFDGAKGFLIGEPNRGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361
               L +A+  ++    +L  ++ YA+     R +SG          +I  P ++R +  
Sbjct: 293 NTARLGTALQGLAHAEWALQNSVAYAKDRLQMRSLSGPKAPEKAADPIIVHPDVRRMLLT 352

Query: 362 IALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                    AL    +   D      A  ++E      ++ PI K +  +         +
Sbjct: 353 QKAFAEGGRALIHYCSMLVDIMKKGTADEKAEADELMSLLTPIAKAFLTETGFESANHGL 412

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG G+I E  + ++ R+   + +  G+     LD+L    L+ +G  L         
Sbjct: 413 QVFGGHGFIAEWGMEQNVRDCRISMLYEGTTGIQALDLLGRKVLMTQGATL--------- 463

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
                  ++   I+      CKE KG  R  +   AL
Sbjct: 464 -------RRFTKIIH---KFCKEHKGDKRLKSYITAL 490


>gi|121596063|ref|YP_987959.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120608143|gb|ABM43883.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 160/400 (40%), Gaps = 63/400 (15%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A  +  Q   + P   RWDK    P       R  H GL       ++   V +
Sbjct: 7   QEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAAL---GAYGICVPE 55

Query: 131 QAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSR 181
           +        L L   LE       G   + SVT+  + A++      +  +DW       
Sbjct: 56  ELGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL------ 109

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                   P+ +  +     LTE   G+D +A+ +   K  +  Y ++G K F++S  + 
Sbjct: 110 -------TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKNG 161

Query: 242 AFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---- 291
              ++  V     G+ G   FLVP      +  G    RL++K+G  S+ T ++ F    
Sbjct: 162 HVAIVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDHCR 216

Query: 292 ---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
               N  G       ++ G +E  +I I   S  M+ S    +LA    Y++ R   G  
Sbjct: 217 IPAENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFDAALA----YSKERESFGQP 272

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + +   +   +AD A  I AA  L +  A   D  +   +EAA A++ A        +MA
Sbjct: 273 IFNHQAVGFRLADCATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMA 325

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             V + A++ +GG G + +  + R YR+     I  G+ +
Sbjct: 326 ERVCSAAIQTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365


>gi|84623559|ref|YP_450931.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84367499|dbj|BAE68657.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 597

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 55/339 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348
              P + ++ +   +++A +SV    + L+E     A+ Y R R  S  +          
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338

Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400
             +I  P ++R +  I      +  LS   A+  D A      + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K    + +      A++C GG GYI E  + +  R++   +I   +     LD++     
Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYECTTGIQALDLIGRKTA 458

Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSIS 492
                G  LF     T    QD  ++  + I  LRD  S
Sbjct: 459 TSQAAGLKLFLTDVDTFANAQDGNAALAEFIKPLRDKCS 497


>gi|90424584|ref|YP_532954.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90106598|gb|ABD88635.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 382

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S   +    ++    G  G   +  L
Sbjct: 125 LTEPGSGSDAAALRTRAVRDGDH-YVLNGQKQFISGASAAGLYVVMVRTGGEGAGGISTL 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPV 309
           + +G   GL +   + K+G  +  T  + F N              GF +    +  G +
Sbjct: 184 VVEGDTPGLSFGANERKMGWNAQPTCAVMFDNARVPAANRLGEEGIGFKIAMAGLDGGRI 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                    + A  S+ G + +L +++ Y ++R   G  L +   ++  +AD+A ++ AA
Sbjct: 244 ---------NIAACSLGGAQSALDKSLSYMKQRKAFGKRLDEFQALQFRLADMATELEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A + D           A ++  + K +   +   V  +A++  GG GY+ E  
Sbjct: 295 RTLVWRAAAALDRKDHD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYG 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I +  R+   + IL G+   M L V   L
Sbjct: 349 IEKIVRDLRVHQILEGTNEIMRLIVARKL 377


>gi|269125478|ref|YP_003298848.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310436|gb|ACY96810.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 599

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 192/467 (41%), Gaps = 70/467 (14%)

Query: 136 RAARLYLMAQLEAGHL-------MSPSVTSASMVALMTTPRVHKDWAPKI------FSRE 182
           RA R++  A L AG L         P+V S +++A      V     P +         E
Sbjct: 81  RALRVFAEAGLLAGELDESLGGMQLPTVVSKAVLAWFQAANVGTAAYPFLTIANANLLVE 140

Query: 183 YDPTNKAPMQKTSVAIG--LG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           Y    +       +A G  LG   L+E + G+ +A I ++ +   DG Y L G K ++S+
Sbjct: 141 YGTPEQVDTWVRPMAAGRFLGTMCLSEPQAGSSLADIATRAEPQPDGTYRLYGTKMWISA 200

Query: 238 PMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              +       ++LA++ G       +  F+VP++L +     G  N +    L +K+G 
Sbjct: 201 GEHELSENIVHLVLAKIPGGPPGVKGISLFIVPKVLVNADGSLGERNDIALVGLNHKMGY 260

Query: 282 RSNATVELEFS----------NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSG 327
           R      L F              G+L+G+    L+     + + +I + L +A +  +G
Sbjct: 261 RGTVNTVLNFGEGAHTPGGAPGAVGYLVGEPHKGLSYMFHMMNEARIGVGLGAAALGYTG 320

Query: 328 M-------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                   +V L      A+   +    LI+   ++R +      +  A AL    +   
Sbjct: 321 YLHSLEYAKVRLQGRPPAAKDPALPPVPLIEHADVRRMLLAQKAYVEGALALGLYCSLLV 380

Query: 381 DEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D++K+  +  A  R      ++ PI K W  +      + A++  GG GY  E ++ + Y
Sbjct: 381 DDSKTAEDAVARDRAALLLDVLTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFY 440

Query: 435 RESPANSILLGSGNAMVLDVLN---LLEKGTN---LFEQLFSTLE--QDLGSSGKKVITI 486
           R++  N I  G+     LD+L    +++ G     L E + +T++   DLG    ++   
Sbjct: 441 RDNRLNPIHEGTHGIQGLDLLGRKVVMKNGMGLRVLGETISATVQCAIDLGGETAEMGRA 500

Query: 487 LRDSIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           L+D+   L      L       + LA+S+  L  AG   +A ++LE 
Sbjct: 501 LQDAFERLTLVTAQLWSAGDPAVTLANSSIYLEAAGHIVVAWIWLEQ 547


>gi|160901416|ref|YP_001566998.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160367000|gb|ABX38613.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 32/274 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIML 246
           AP+ +  +     LTE   G+D +A+ T+  +  SD  Y ++G K F++S  + D  I++
Sbjct: 110 APLARGEMLGAFCLTEPHVGSDASALRTTATRDGSD--YVINGVKQFITSGKNGDVAIVI 167

Query: 247 AQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294
           A  +   G      F+VP      S  G    RL++K+G  S+ T +++F       +N 
Sbjct: 168 AVTDKAAGKRGMSAFIVPT-----SAPGYQVLRLEDKLGQHSSDTAQIQFEGCRIPAANL 222

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       ++   +E  +I I    A  SV   R +   A+ Y++ R   G  + +   
Sbjct: 223 IGAEGEGYRIALSALEGGRIGI----AAQSVGMARAAFDCALQYSKERESFGQPIFNHQA 278

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD A  I AA  L +  A+  D      +EAA A++ A        +MA  V + 
Sbjct: 279 VGFRLADCATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSA 331

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++ +GG G + +  + R YR+     I  G+ +
Sbjct: 332 AIQTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|111018872|ref|YP_701844.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818402|gb|ABG93686.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 30/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           P   T   +G +G+TE   G+D+ AI +   +  D  Y ++G K F+++  S   I+LA 
Sbjct: 115 PSMATGEILGAIGMTEPGAGSDLKAIKTTAIRDGDE-YVVNGSKTFITNGASADMIVLAV 173

Query: 248 QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           + + + G   V  L+ D    P G    R+ +K+G     T EL F++       LLG+ 
Sbjct: 174 KTDPKAGAKGVALLIVDLRDCP-GFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGEE 232

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               G +    +   L     +   M  ++ + + Y R R   G  L +         + 
Sbjct: 233 GQGFGQLMAQLVQERLIIGAQASGAMTRAVEDTVAYTRSRQAFGHSLFE-------FQNT 285

Query: 363 ALDIAAATALSFRLANSFD---EAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEA 415
           A ++A    ++   A   D   EA  R E    EAA       + KYW  +   AVI   
Sbjct: 286 AFELAECQTIARTCAVFLDHCIEAHLRGELDPSEAA-------MVKYWLTEQQCAVIDRC 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 339 VQLHGGYGYMREYLIARMYEDARVQKIYAGANEVM 373


>gi|15596732|ref|NP_250226.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107100966|ref|ZP_01364884.1| hypothetical protein PaerPA_01001996 [Pseudomonas aeruginosa PACS2]
 gi|218892509|ref|YP_002441376.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254234637|ref|ZP_04927960.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719]
 gi|254239883|ref|ZP_04933205.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192]
 gi|9947494|gb|AAG04924.1|AE004582_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126166568|gb|EAZ52079.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719]
 gi|126193261|gb|EAZ57324.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192]
 gi|218772735|emb|CAW28520.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 382

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + L +TE  GG+D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   
Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL +    G    R   K+G  ++ T EL F +       L+G  N     +     
Sbjct: 184 ISLLLVEKGTAGFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+M+    +++L E++ +AR R   G  +    V++  +A++A  +  +   ++
Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A      KS  +E + A       K +   +A  +  +A++ +GG GY+ E  + R Y
Sbjct: 304 RQAAKMAAGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356

Query: 435 RESPANSILLGSGNAM 450
           R++   SI  GS   M
Sbjct: 357 RDNRILSIGGGSREIM 372


>gi|311068395|ref|YP_003973318.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus
           1942]
 gi|310868912|gb|ADP32387.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus
           1942]
          Length = 380

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 124/266 (46%), Gaps = 25/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
            GLTE   G+D     ++ ++  D  Y ++G K ++++      +++  V G+  +G  +
Sbjct: 123 FGLTEPNAGSDAGGTQTKAERKGDE-YVINGEKCWITNANYARTVIVTAVTGKNELGKNI 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  L+      GL      +K+G R + T E+   N       LLGD +         + 
Sbjct: 182 ISALIVPTDTAGLTITNPYDKMGVRGSDTAEILLENVRVPAENLLGDSSKGF-----KQF 236

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LD   +S++ + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  A
Sbjct: 237 LHTLDGGRISIAALAVGIAQGALDASLSYAKERKQFGQSISSFQAIQFKLADMAMEIDLA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  + A   D  +  ++E+A+A++ A        +MA     +A++  GGSGY+ E  
Sbjct: 297 RQMVIKAAWLKDRQRPFTKESAFAKLFA-------SEMATRACNQAIQIHGGSGYMREYG 349

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + R  R+  A  + +G G + +  ++
Sbjct: 350 VERMLRD--AKLMEIGEGTSEIQRIV 373


>gi|302535475|ref|ZP_07287817.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302444370|gb|EFL16186.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 608

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 159/360 (44%), Gaps = 65/360 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGHGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKFHFDWETGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILID------- 351
            +     +  M ++I     ++   +++ +      A+ YA+ R V G  L +       
Sbjct: 284 KHDG---IRQMFMIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLANFMDKTAP 339

Query: 352 ------QPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI-----MAP 398
                  P ++R++           AL    A+  DE   K  + E A A I     + P
Sbjct: 340 KVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQDEIAVKQAAGEDASAEIGLNDLLLP 399

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K +  + +   +A++++  GGSGY++E  I ++ R++  +++  G+  A+        
Sbjct: 400 IVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT-TAI-------- 450

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKIALASSAAAL 517
            +G + F   F  + +D G+S    + IL ++I     E  G       + ALA +A  L
Sbjct: 451 -QGQDFF---FRKIVRDQGAS----LNILSETIKKFLAEGPGGEDLAPARDALAKAAVDL 502


>gi|225182055|ref|ZP_03735486.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167268|gb|EEG76088.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 378

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     G GLTE   GTD A + +   K+    Y L+G K F+++   D F++ A  
Sbjct: 113 PLAQGKALGGYGLTEPSAGTDAAGLRTTA-KLDGDHYILNGTKIFITNGDGDTFVVFAAT 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G      + K+G R+++T EL F +     +   N+     
Sbjct: 172 DKSKGPKGISAFIVEKGFEGFKVGSHEKKLGIRASSTTELIFEDC---KVPKENLLGKEG 228

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +  LD     ++   + LA+     A+ Y++ R   G  + +   +   +AD+A
Sbjct: 229 EGFKIAMSTLDGGRNGIAAQALGLAQGAFEAALEYSKGREQFGQPIFNFQAISFMLADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+  L+++ A    E     + +A A++       +    A  +   A++  GG G
Sbjct: 289 TKIEASRLLTYQAAYLEGEGLPYGKASAMAKL-------YASDAAMEITTNAVQIFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R  R++    I  G+
Sbjct: 342 YSREYPVERMMRDAKITQIYEGT 364


>gi|222112221|ref|YP_002554485.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731665|gb|ACM34485.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 160/401 (39%), Gaps = 65/401 (16%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH-------CSIWDRS 123
           QE+ R A  +  Q   + P   RWDK    P       R  H GL        C   D  
Sbjct: 7   QEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAALGAYGICVPEDLG 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFS 180
              +     +   A  L  +A  + G   + SVT+  + A++      +  +DW      
Sbjct: 59  GAGL----DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL----- 109

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                    P+ +  +     LTE   G+D +A+ +   K  +  Y ++G K F++S  +
Sbjct: 110 --------TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKN 160

Query: 241 DAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF--- 291
               ++  V     G+ G   FLVP      +  G    RL++K+G  S+ T ++ F   
Sbjct: 161 GHVAIVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDHC 215

Query: 292 ----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                N  G       ++ G +E  +I I   S  M+ S    +LA    Y++ R   G 
Sbjct: 216 RIPAENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFDAALA----YSKERESFGQ 271

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   +   +AD A  I AA  L +  A   D  +   +EAA A++ A        +M
Sbjct: 272 PIFNHQAVGFRLADCATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EM 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A  V + A++ +GG G + +  + R YR+     I  G+ +
Sbjct: 325 AERVCSAAIQTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365


>gi|170727539|ref|YP_001761565.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812886|gb|ACA87470.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 385

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G  G   +  +
Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGATELLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                 +G+ Y + ++K+G  +  T E+ F+        LLG+     G    MK L   
Sbjct: 183 AVPADADGITYGKAEDKMGWNAQPTREITFTEVRVPVANLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  S+   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  L  RL
Sbjct: 241 RINIATCSIGTAQAALERATQYMTERKQFGKPIAAFQALQFKLADMATELVAARQL-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F   +   E  AY      + K +   +   V   A++  GG GYI E  + RH R+
Sbjct: 300 A-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHVRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|167647119|ref|YP_001684782.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349549|gb|ABZ72284.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 388

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 37/288 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+  +             L ++E   G+D+ ++  + + + D  Y
Sbjct: 115 TPEQKQRYLPKLISGEHVGS-------------LAMSEAGSGSDVVSMKLKAELVGD-RY 160

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++P +D  ++ A+  E R+  FL+ + ++     G    +  +K G R +
Sbjct: 161 ALNGTKFWITNAPHADTLVVYAKTDERRITAFLIEKGMK-----GFSVSKKLDKFGMRGS 215

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHY 338
            T EL F +     + + NV       + +L+     + A++S      M+  L   + Y
Sbjct: 216 DTAELVFEDC---EVPEENVMGPVGGGVGVLMSGLDYERAVLSAGPLGIMQACLDVVLPY 272

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +    +M+  IAD+ + + +A A  + +A + D  K+   +AA A +MA 
Sbjct: 273 VRDRKQFGQAIGSFQLMQGKIADMYVALNSARAYVYAVARACDAGKTTRFDAAGAILMA- 331

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 332 ------SENAVRVSLEAIQALGGAGYTKEWPVERLMRDAKLYDIGAGT 373


>gi|118473445|ref|YP_884819.1| acyl-CoA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|51507244|gb|AAU04876.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174732|gb|ABK75628.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 48/371 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIEGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+   D      G  NG+    +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFHFDHETGEIGERNGVFVTNVEHKMGLKVSATCELSLGQHGIPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +     +++ +      A+ YA+ R V G             
Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKER-VQGADMTQMTDKTAPR 342

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-------PI 399
             +   P ++R++           A+    A   D   +++       + A       PI
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRAIYLYTATFQDAEVAQAVHGVDGDLAARVNDLLLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457
            K +  + A A + E+++ +GGSG++++  I ++ R+S  +S+  G+      D     +
Sbjct: 403 VKGFGSETAYAKLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKI 462

Query: 458 LEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514
           +         +   +EQ +   +G   +   R+ ++    D +G+A  LT  + A    A
Sbjct: 463 IRDKGQALAYVAGEIEQFIKNENGNGRLKTERELLATALADVQGMAASLTGYLMAAQEDA 522

Query: 515 AALYRAGMNDI 525
           A++Y+ G+  +
Sbjct: 523 ASIYKVGLGSV 533


>gi|332878036|ref|ZP_08445766.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332683998|gb|EGJ56865.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 576

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 33/299 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L G   +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVDVRRIENKMGIHGSPTCELVYKNAKAELCGSRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R+E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQ 467
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G  +     FEQ
Sbjct: 407 DGIQVHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGAYIATIRDFEQ 465


>gi|310799839|gb|EFQ34732.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 446

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 23/281 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K  +G Y ++G K W  +S  +D FI+ A 
Sbjct: 175 PKLATNTVGSFCLSEPVSGSDAFALATKATKTENG-YKINGSKMWITNSKEADFFIVFAN 233

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301
           ++   G   +   + + +  G    + + K+G ++++T       VE+   N  G     
Sbjct: 234 LDPAKGYKGITAFIVEKNTKGFSIAKKEKKLGIKASSTCVINFDDVEIPRENLLGEEGSG 293

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIA 360
              + G + + +I I      +++     S   A+ Y        G L+ +   M+  IA
Sbjct: 294 YKYAIGLLNEGRIGIAAQMTGLALG----SWENAVKYVWNDRKQFGQLVGEFQGMQHQIA 349

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECI 419
               +IAAA AL +  A        R +EA    +M A + K +  ++A  V   A+E +
Sbjct: 350 QSYTEIAAARALVYNAA--------RKKEAGDNFVMDAAMAKLYASQVAGRVSGLAIEWM 401

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG G++ +    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 402 GGMGFVRDGPAEKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 442


>gi|225791074|gb|ACO31278.1| PtmO4 [Streptomyces platensis]
          Length = 388

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 50/274 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L L+E   G+D+AA+ +  ++  D  Y LSG K F+++ +   F+++A       C   P
Sbjct: 123 LALSEPDAGSDLAAMRTTARREGDH-YVLSGQKTFITNGILADFVIVA-------CKTDP 174

Query: 260 R---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296
                     ++E G P G    R  +K+G ++  T EL F +               F 
Sbjct: 175 DARHKGISLLVVERGMP-GFERGRRLDKVGLKAQDTAELFFHDVRVPAANLLGAEGRGFA 233

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +++ +L     P E + I      A+ ++ G + +   A+ YA+ R   G  +      +
Sbjct: 234 YMMENL-----PTERIAI------AVSALGGAQRAFELALEYAKTRTAFGQPIGTFQANR 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            A+AD+   + AA         +  E    + +AA A       KYW  + A  +I   +
Sbjct: 283 FALADMRAKLDAARTYVDGCIMALVEGHLTAVDAAAA-------KYWTTETAWQIIDRCV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GYI E  IAR +R++    I  G+   M
Sbjct: 336 QLFGGYGYINEYEIARIWRDNRIERIFGGTSEIM 369


>gi|299768730|ref|YP_003730756.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698818|gb|ADI89383.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 387

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F     +   LLG  NV    + +  
Sbjct: 185 GISMLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVSVSNLLGKENVGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377


>gi|312111551|ref|YP_003989867.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216652|gb|ADP75256.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 51/297 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK  S E             +   + +TE   G+D+A I++   K  D  Y ++G 
Sbjct: 108 RKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGDH-YIVNGQ 153

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRLKNKIG 280
           K F+++ +    +++A       C   P            ++E  +P G    R  +K+G
Sbjct: 154 KTFITNGIHADLVIVA-------CKTDPNAKPPHKGISLLVVERDTP-GFTRGRKLDKVG 205

Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             +  T EL F        N  G            ++  ++++    AI + +   V   
Sbjct: 206 LHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIV----AIAAQTAAEVMFE 261

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y ++R   G  + +   ++  +A+++ +I         +     + K+     + A
Sbjct: 262 LTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQGKNVVTHVSMA 321

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                  K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I  G+   M
Sbjct: 322 -------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371


>gi|189462651|ref|ZP_03011436.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136]
 gi|189430812|gb|EDU99796.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136]
          Length = 568

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 132/288 (45%), Gaps = 28/288 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L G+  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   +A I   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G
Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNG 454


>gi|167580782|ref|ZP_02373656.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
 gi|167618886|ref|ZP_02387517.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
          Length = 395

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGSKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +++      +   +LE G   GL    +  K+G R++ T E+     F     +L ++  
Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENILPNVKG 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  +  R++V      G  L    ++++ +
Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  A  +   A + +
Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 350 GGNGISDEFGVARH 363


>gi|19704118|ref|NP_603680.1| Acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328674|ref|ZP_06871191.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19714324|gb|AAL94979.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154273|gb|EFG95074.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 37/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +  +++ A  +   G   +   + + +  G    + + K+G R +AT EL 
Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSATCELI 215

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------EA 335
           F N       LLGD        +  KI      A+M++ G R+ +A            EA
Sbjct: 216 FENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDEA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I+YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A++
Sbjct: 264 INYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKL 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 324 FAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|254295199|ref|YP_003061222.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043730|gb|ACT60525.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 602

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           L+E + G+ ++ I ++     +G Y + G K ++S     +++  +  +LA++ G     
Sbjct: 163 LSEPQAGSSLSDIRTKATPTDEGHYLIEGSKMWISGGDHELAENIVEMVLAKIPGGPPGV 222

Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302
             +  F+VP  R+ +DGS    N +    L +K+G+R      L F    +  G+L+G  
Sbjct: 223 RGISLFIVPKYRVNDDGSLGPKNDISLAGLNHKMGHRGTTNCLLNFGENGDCHGYLVGK- 281

Query: 303 NVSTGPVEDMKILIYL----------DSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
                P E +K + ++           S + +++G   SL  A   ++ RH         
Sbjct: 282 -----PHEGLKSMFHMMNEARIGVGQGSVMSALTGFLYSLKYAGERSQGRHPQDKDPTKP 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPI 399
              +I+   +KR +      +  A+AL F   +  ++ K   ++    R      I+ P+
Sbjct: 337 QIPIIEHTDIKRLLMAQKAAVEGASALLFYCMDLVEQQKLTDDKNEQMRLALLLEILTPL 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            K W  +        A++ +GG GY  E  + R+YR++  N I  G+     LD+L
Sbjct: 397 AKSWPSEFCLEANKHAIQILGGYGYTREFPVERYYRDNRLNHIHEGTHAIHGLDLL 452


>gi|254427189|ref|ZP_05040896.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp.
           DG881]
 gi|196193358|gb|EDX88317.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp.
           DG881]
          Length = 595

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244
           PM        + LTE   G+ +  I ++     DG Y L G+K F+S   + ++D  +  
Sbjct: 152 PMMAGRFTGTMALTEPHAGSSLTDIRTRAVPQDDGSYRLKGNKIFISGGENELADNIVHL 211

Query: 245 MLAQVEGR------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++ G       +  F+VP  RL +DG+P   N +    L +K+G R   +  L F +
Sbjct: 212 VLAKIPGGPEGVKGISLFVVPKYRLDDDGNPDARNDVILAGLIHKLGYRGTTSTALTFGD 271

Query: 294 T---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                G+L+G+    L      + + ++ +   + ++   G R +L  A    + RH   
Sbjct: 272 GDDCHGYLVGEPHQGLRYMFQMMNEARVGVGFGAGLLGYRGYRFALDYARDRVQGRHPDD 331

Query: 347 G-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYAR 394
                    +I+   +KR +        AA A+S       DE ++       E      
Sbjct: 332 ADFSKPQVPIIEHADVKRLLLTQKAYAEAAIAMSLYGYRLVDEIQTGEEAAAKEAELLLD 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K W  +        A++  GG+GY  E  + + +R++  N I  G+     LD+
Sbjct: 392 LLTPVLKTWPSEFGLKANDMAIQVFGGAGYTREYPVEQVWRDNRLNPIHEGTTGVHGLDL 451

Query: 455 L 455
           L
Sbjct: 452 L 452


>gi|134100528|ref|YP_001106189.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004993|ref|ZP_06562966.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913151|emb|CAM03264.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 41/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---F 256
           + +TE   G+D+A +++  ++   G Y L+G K F++  ++   +++    GR G     
Sbjct: 124 IAMTEPGTGSDLAGMSTTARR-EGGDYVLNGAKTFITGGINADLVLVVARTGRGGDRRDG 182

Query: 257 LVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT--------------FGFLLG 300
           L   ++E G P    ++R +N  K+G ++  T EL F++               FG+L G
Sbjct: 183 LSLLVVERGMPG---FERGRNLDKLGLKAQDTAELSFTDVRVPAANLLGAEGAAFGYLTG 239

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +L     P E + I +   +A  +      +L   + Y R R   G  +      K  +A
Sbjct: 240 NL-----PQERLSIAVAAQAAAEA------ALETTLEYVRERRAFGTPVSSFQNTKFELA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             A +I A  AL        D A    ++ A +   A   K +C ++   V+   ++  G
Sbjct: 289 ACATEIEAGRAL-------LDRALGEHDDGALSGADAAKVKIFCTELQARVVDRCLQLHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GYI E  IAR Y ++    I  G+
Sbjct: 342 GYGYIREYRIARLYADARVTRIFGGT 367


>gi|157134292|ref|XP_001663227.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108881392|gb|EAT45617.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 424

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 42/293 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S E+              IG L ++E   G+D+ ++ ++ +K  D  
Sbjct: 144 TEEQKQQYLPKLISGEH--------------IGALAMSEAGSGSDVVSMKTKAEKKGD-Y 188

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y L+G K W  + P +D +I+ A+       +  +  F+V R    GSP G       +K
Sbjct: 189 YVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHGISAFIVER----GSP-GFSRGPKLDK 243

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           +G R + T EL F +       +LG LN   G    M  L Y  L  A   V  M+ +  
Sbjct: 244 LGIRGSGTCELVFEDVKVPAKNMLGQLN--KGVYVLMSGLDYERLVLAAGPVGLMQAACD 301

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R      + +  +++  +AD+   + A  A  + +A S D  K+  ++ A  
Sbjct: 302 VAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARSCDMGKANPKDCAGV 361

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       +C + A  V  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 362 IL-------YCAEKATQVALDAIQILGGNGYINDYPTGRIMRDAKLYEIGAGT 407


>gi|34763420|ref|ZP_00144369.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886914|gb|EAA24037.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 386

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 39/292 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDG 224
           T ++ + + PK+ S E+              IG  GLTE   GTD A   +   Q    G
Sbjct: 108 TEKLKQKYLPKLASGEW--------------IGAFGLTEPNAGTDAAGQQTMAVQDPETG 153

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++   ++ ++++A  +   G   +   + + +  G    + + K+G R 
Sbjct: 154 EWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRG 213

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334
           ++T EL F N       LLGD        +  KI ++ LD   + ++   + +A     E
Sbjct: 214 SSTCELIFENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGE 267

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A+
Sbjct: 268 AIGYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 327

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 328 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 372


>gi|320163645|gb|EFW40544.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 644

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 51/356 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE------- 250
             LTE   G+D  +I S+ +  +DG  + L+G K W  +  +++ F + AQ +       
Sbjct: 209 FALTEPSSGSDANSIRSRAKLSADGKHWVLNGSKIWISNGGIAEIFTVFAQTQVPDRKTG 268

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300
               +V  F+V R     S  GL   + +NK+G + + T E+ F        N  G +  
Sbjct: 269 ELKDKVTAFIVER-----SFGGLTNGKPENKMGIKCSNTAEVYFDDVKIPVENVLGQVGE 323

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              V+   + + +  +    A +S + M+  LA++  +A  R   G  + +  ++K   A
Sbjct: 324 GFKVAMAILNNGRFGM---GAALSGT-MKAMLAKSAEHAINRTQFGSKIKEFGMIKEKFA 379

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +AL I A  ++++ LA + D   +  +      I A I+K +  + A +V  EA++ +G
Sbjct: 380 QMALKIYATESMAYTLAANMDRGSNDYQ------IEAAISKVFASEAAWSVADEALQVMG 433

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFE---------QLF 469
           G G+++     R  R+     I  G+     M + +  + + G +L E           F
Sbjct: 434 GIGFMKAAGFERVVRDLRIFRIFEGANEILRMFIALTGIQDAGKDLKEVQAALKSPISNF 493

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
             L Q+     K+++ +  D+I      KG+   L     L  S A  + A ++ +
Sbjct: 494 GVLSQEATKRIKRIVGVGHDTI------KGVHPLLRGPAGLVESQATAFGAAVDSL 543


>gi|262371049|ref|ZP_06064371.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262313935|gb|EEY94980.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 600

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 34/296 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPQADGSYAITGEKIFISAGEHDMAENIVHIVLARLPGAPTGT 225

Query: 253 --VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  L  DG+    N +    +++K+G   N+T  + F N  GFL+G  N  
Sbjct: 226 KGISLFIVPKFNLNADGTVGERNAVRCGSIEHKMGIHGNSTCVINFDNAKGFLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +        + +A+  ++    +   A+ YA+ R                  +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGAFQGALTYAKDRLAMRSLTGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRL---ANSFDEAKSRSEEAAYARIMA---PITKYWCCKM 407
            ++  +           AL + L   A+  ++  +  E  +   I++   PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLSLHADVVEQGATEEERKSSDNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
                   ++  GG G+I E  + +  R++    +  G+     LD+L     GT 
Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLLGRKVLGTQ 461


>gi|254303807|ref|ZP_04971165.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323999|gb|EDK89249.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 37/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +  +++ A  +   G   +   + + +  G    + + K+G R +AT EL 
Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSATCELI 215

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------EA 335
           F N       LLGD        +  KI      A+M++ G R+ +A            EA
Sbjct: 216 FENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDEA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I+YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A++
Sbjct: 264 INYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKL 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 324 FAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|222112226|ref|YP_002554490.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731670|gb|ACM34490.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 396

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
            K + PK+ S E+              +G L ++E   G+D+ ++  + +    G Y L+
Sbjct: 116 RKKYLPKLISGEH--------------VGALAMSEPGAGSDVISMKLRAED-KGGYYLLN 160

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K W  + P +D  ++ A+ E  +G   V   L +    G    +  +K+G R + T E
Sbjct: 161 GCKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGE 220

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRR 342
           L F N     +   NV  G     K+L+  LD     ++G     M+  +   + Y   R
Sbjct: 221 LVFQNV---EVPAENVLGGVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDR 277

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +  +++  +AD+   + A  + ++ +A + D   S  +     R        
Sbjct: 278 KQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDMLGS--DHVRQVRKDCASVIL 335

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           WC + A  +  E ++  GG+GYI E  + R +R++    I  G+
Sbjct: 336 WCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAKLYEIGAGT 379


>gi|218781613|ref|YP_002432931.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762997|gb|ACL05463.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML------AQVEGR 252
             +TE   G+D   +  +   + DG  Y ++G K F++S  +   +++      ++    
Sbjct: 123 FAMTEPLAGSD--PLRQETTAVQDGDHYIINGVKRFITSGQNAGVVIVTAKTDPSKRHRG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
           +  FLV +    G+P G    RL++K+G R++ T +L F       S   G   G  +++
Sbjct: 181 ITAFLVDK----GTP-GFSVGRLEDKMGLRASDTADLYFEDCRVPASQILGGEGGGFSLA 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++  +I I    A  S+   +  L  A+ YA+ R   G  +     +   +ADIA +
Sbjct: 236 MKALDGGRIGI----AAQSIGVAQACLDAAVKYAKEREQFGKPIGQFQGVSGPLADIATE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  ++   A+  D  ++ + EA+ A++ A        +M   V A+A++  GG GY 
Sbjct: 292 IHAARLMALDAASRKDRGQNFTMEASMAKLFA-------SEMVNRVTAKALQIHGGYGYT 344

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R+YR++   +I  G+
Sbjct: 345 KDYPVERYYRDARVFTIYEGT 365


>gi|318061797|ref|ZP_07980518.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318076677|ref|ZP_07984009.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
          Length = 606

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 128/324 (39%), Gaps = 51/324 (15%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           SRE   T   PM +      + L+E + G+ +A + ++ +   DG Y L G+K ++S   
Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTYRLFGNKMWISGGD 209

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            +       ++LA+  G       +  F+VP+ L D     G+ N +    L +K+G R 
Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDDDGGIGARNDVVLAGLNHKMGYRG 269

Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329
                L F              G+L+G+ N     +  M    +I + L +  +  +G  
Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328

Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378
                A+ YAR R     +    P            ++R +      +  A AL+     
Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+ ++  E AA         I+ PI K W  +      + A++  GG GY  E  + +
Sbjct: 386 LVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
            YR++  N I  G+     LD+L 
Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469


>gi|313679641|ref|YP_004057380.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977]
 gi|313152356|gb|ADR36207.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977]
          Length = 373

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 29/255 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   + S  +++ DG Y LSG K W  S   +  ++++A+    +  FLVP 
Sbjct: 124 LTEASAGSDPKGLKSTAERV-DGGYRLSGVKSWITSGGQAQLYVIMARAPEGITAFLVP- 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
                   GL +   + K+G  +  T E+     F      L       E+ K L Y   
Sbjct: 182 ----AGAEGLSFGEPEEKMGLHAAHTTEVRMDGVFVPDEDRLG------EEGKGLHYALA 231

Query: 318 -LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   V +A A       YA  R   G  + +   +   +A++A  I A+  
Sbjct: 232 GLDSGRLGIAAQAVGIARAAFEIARDYADEREQFGRRIREFQGVSFKLAEMATAIEASRL 291

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A         + EA+ A++MA        + A  V  EA++ +GG+GY  +  + 
Sbjct: 292 LVLNGAMKKQAGARFTREASMAKLMA-------SRTAVDVTREAVQILGGNGYAVDYRVE 344

Query: 432 RHYRESPANSILLGS 446
           R+YR++    I  G+
Sbjct: 345 RYYRDAKITEIYEGT 359


>gi|294140054|ref|YP_003556032.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12]
 gi|293326523|dbj|BAJ01254.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12]
          Length = 389

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 28/311 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   T   +G L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLVTGEHVGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + D
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAQTYVIYAKTDLDKGAHGITAFIVD 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDS 320
               G    +  +K+G R + T EL F +       +LG LN        +K+L+  LD 
Sbjct: 195 RDSKGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENILGGLN------NGIKVLMSGLDY 248

Query: 321 AIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +SG     M   +   I Y   R   G  +    +++  +AD+   + AA +  + 
Sbjct: 249 ERVVLSGGPLGIMNACMDIVIPYVHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYN 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R
Sbjct: 309 VAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKLYEIGAGT 372


>gi|329927598|ref|ZP_08281761.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5]
 gi|328938387|gb|EGG34777.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5]
          Length = 596

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 25/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +   DG  Y L+G K ++++   +D FI+ A+++G     F+V
Sbjct: 152 LTEPTSGSDALGAKTTARLSDDGEYYILNGSKLYITNAGFADIFIVYAKIDGEHFTAFIV 211

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + +E     G      + K+G + ++T  L F +       LLG++        ++  +
Sbjct: 212 EKEME-----GFTLGPEEKKMGIKGSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNI 266

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  +V   + S+  +  YA  R      +   P+M++ +A + +      ++ +R
Sbjct: 267 GRYKLAAGTVGAAKESIELSAKYANTRKQFDTPISQFPLMRKKLAKMNITAFVMESMVYR 326

Query: 376 LANSFDEAKS----RSEEAA---------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A   DEA       SE+A          YA I   I K +C +    V  EA++  GG 
Sbjct: 327 TAGLLDEAMQDIDYNSEDAGIHSAAAISDYA-IECSINKVFCSEGLDNVADEAVQIHGGY 385

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI+E  + R YR+S  N I  G+
Sbjct: 386 GYIQEYKVERIYRDSRINRIFEGT 409


>gi|229193595|ref|ZP_04320539.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228589900|gb|EEK47775.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +   +GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTSGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|330996007|ref|ZP_08319901.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329574004|gb|EGG55582.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 576

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 33/299 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L G   +  G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVDVRRIENKMGIHGSPTCELVYKNAKAELCGSRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L+     EA+ YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R+E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIACERKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQ 467
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G  +     FEQ
Sbjct: 407 DGIQVHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGAYIATIRDFEQ 465


>gi|299768807|ref|YP_003730833.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
 gi|298698895|gb|ADI89460.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
          Length = 593

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 49/372 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNEDGTYNITGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277
           F++   +D       ++LA+          +  F+VP+ L  EDGS    N +    +++
Sbjct: 197 FITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDAAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  +G    ++P         ++R + ++  +  A+ A +  +    D  K 
Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A  +      ++ PI K +    A     +A    GG GYI E  + +  R+   
Sbjct: 377 STDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRI 436

Query: 440 NSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKED 497
             I  G+      D++     K    F   + T  +D  +     +  ++D ++    E 
Sbjct: 437 AQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFANDLDTDLNFIKDATLDAATEI 496

Query: 498 KGLARFLTEKIA 509
           + + +F+ E+ A
Sbjct: 497 EAITQFIIEQAA 508


>gi|121636157|ref|YP_976380.1| putative acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224988630|ref|YP_002643317.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121491804|emb|CAL70266.1| Probable acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224771743|dbj|BAH24549.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  + VP+ L   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVRVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|77459092|ref|YP_348598.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77383095|gb|ABA74608.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 375

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+    +     LTE + G+D +++ ++ +   D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLASGEMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGIVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
                G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  G
Sbjct: 170 TDPSAGKRGISAFIVP----TDSP-GYKVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  ++ I    A  SV   R +   A  YAR R   G  +I+   + 
Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERDTFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A   D  +        A + A + K +  +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGQP-------ALVEASMAKLFASEMAEKVCSMAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLNDFPLERIYRDVRVCQIYEGTSD 365


>gi|31791422|ref|NP_853915.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium bovis AF2122/97]
 gi|31617007|emb|CAD93114.1| PROBABLE ACYL-COA DEHYDROGENASE FADE5 [Mycobacterium bovis
           AF2122/97]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  + VP+ L   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVRVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|256396543|ref|YP_003118107.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362769|gb|ACU76266.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 388

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D   +T+  +K+ DG + + G KWF++    +D  I+LA      G    P 
Sbjct: 123 VTEPNAGSDPQNLTTTARKVDDG-WSIDGEKWFVTVGDHADFIIVLAAA----GEDRAPT 177

Query: 261 L-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312
           L L D +  G+  QR    +        E  F++ F       G L    +++     + 
Sbjct: 178 LFLVDKATQGVAVQRTPRFMHTFVYEHPEFTFTDVFVPDDQVLGGLGEGYDITRAWFTEE 237

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +++I    A  ++     +L  A  +A RR   G  + +  +++  +AD A+DIA   A 
Sbjct: 238 RLMI----AARTIGAAERALELAREWAVRREQFGQPIANFQLIQGMLADCAVDIAVNRAY 293

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             ++A    +  +   +  +A+  A I K    + +  VI   ++  GG GY    ++ R
Sbjct: 294 FLQVAWEISQPDA-DRKTLHAK--AAIAKLTASEASNRVIDRCVQIFGGRGYDRSYAVER 350

Query: 433 HYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
            YRE   + I  G+     L +   L+++GTN+ 
Sbjct: 351 LYRELRVDRIWEGTSEIQRLIISGELIKRGTNVL 384


>gi|239813137|ref|YP_002942047.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239799714|gb|ACS16781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 399

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 115 FGTEAQKQKFLPKLATGEWIGCFGLTEPDHGSDPGSMVTRAKKVPGG-YSLSGAKMWISN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G+  GL    +  K+G R++ T E+     
Sbjct: 174 SPIADVFVVWAKEVSESGTVGPIRGFVLEKGT-KGLSAPAIHGKVGLRASITGEIVMDGV 232

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        ++    GP         L+SA   +S   +  AE     A  Y   R   G
Sbjct: 233 FCPEENAFPEVQGLKGP------FTCLNSARYGISWGALGAAEDCWHRARQYTLDRKQFG 286

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +I      S RL    DE  +  E       +  I K   C 
Sbjct: 287 RPLAANQLIQKKLADMQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCG 339

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            A  +   A + +GG+G  +E  +ARH
Sbjct: 340 KALDIARLARDMMGGNGISDEFGVARH 366


>gi|169627170|ref|YP_001700819.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169239137|emb|CAM60165.1| Probable acyl-CoA dehydrogenase (FadE) [Mycobacterium abscessus]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 31/293 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    + W PK  S E             +   +G+TE  GG+D+AA+ +   K  D 
Sbjct: 103 LTTDEQKQRWLPKFCSGE-------------MITAIGMTEPSGGSDLAALKTTAVKDGDD 149

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNR 282
            + ++G K F+++   +D  ++ A+    +    +    +E+G P G    R  +K+G  
Sbjct: 150 -WVINGSKTFITNGARADLVVVAARTAPELKAKGITLFAVEEGMP-GFERGRKLDKVGQP 207

Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIH 337
              T EL F++       ++G++N   G +  M+ L    +  A+ +++     L E + 
Sbjct: 208 EADTAELFFTDVRVPAENVIGEVN--QGFISMMQRLPQERMGCAVANIAHAVAVLEETVE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +      K  IA++   + AA           D+A     +     I A
Sbjct: 266 YAKERKAFGQQIGSLQYNKFLIAELVTKLEAAQVY-------VDQAVLAHSKGELTAIDA 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              K+W  ++   VI   ++  GG GY++E  +AR + ++    I  GS   M
Sbjct: 319 AKAKWWSSQVQNEVIDACVQLHGGYGYMKEYRVARAWMDARVTKIWAGSNEIM 371


>gi|120434501|ref|YP_860198.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117576651|emb|CAL65120.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 391

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G++   +T+  +   D  Y L+G K W  +SP +D  ++ A+ E GR+   +
Sbjct: 136 FGLTEPDHGSNPGGMTTNFKDNGDH-YLLNGAKMWISNSPFADIAVVWAKNEDGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F N     +   N+          L  
Sbjct: 195 VERGME-----GFTTPETHNKWSLRASATGELIFDNV---KVPKENLMPNKSGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ YA+ R   G  +  + + ++ +A++  +I  A  +
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKEREQFGVPIASKQLQQKKLAEMITEITKAQLM 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RL    +E K+ S + + A       K    +MA  +  EA + +GG G   E SI R
Sbjct: 307 AWRLGTLRNEGKATSAQISMA-------KRNNVEMAIKIAREARQVLGGMGISGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|584714|sp|Q07417|ACADS_MOUSE RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|192659|gb|AAA16714.1| short chain acyl-CoA dehydrogenase [Mus musculus]
          Length = 412

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  ++  D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A+A     + YA  R+  G  L     ++  +AD+AL + 
Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALE 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++E+A  ++ A        + A A+  +A++ +G  GY+ E
Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMRKLAA-------SEAATAISHQAIQILGSMGYVTE 375

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 376 MPAERYYRDARITEIYEGT 394


>gi|298246002|ref|ZP_06969808.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297553483|gb|EFH87348.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 386

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 36/263 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255
           L+E   G+D A++  + ++  D  Y L+G+K W  ++  +D ++++A+         + C
Sbjct: 124 LSEAAAGSDAASLQCRAERSGDS-YILNGNKLWVTNAGEADIYLLMARTAPGNDASGISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F +    E  +P G  + + + K+G  S+ T EL F N        + VS    E+ +  
Sbjct: 183 FAI----EKDTP-GFAFGKTERKMGLHSSPTRELIFENC------QIPVSQRLGEEGQ-- 229

Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ S+ G R+++              A  YA+ R   G  +     ++  +AD+A
Sbjct: 230 -GFKIALSSLDGGRINIGAVAVGVAQAAFETARQYAQERQQFGKSIGTFQAIEFMLADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I A+  L +  A   D+++  S++ +   + A + K +    A  V   A++ +GG+G
Sbjct: 289 MKIEASRLLVYEAAYKLDQSRQPSKQVS---MYASMAKCFATDSAMEVTTNAVQVLGGAG 345

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+ +  + R+ R+     I  G+
Sbjct: 346 YVRDYPVERYMRDVKVAQIFEGT 368


>gi|295395252|ref|ZP_06805460.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972014|gb|EFG47881.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 387

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 47/362 (12%)

Query: 116 HCSIWDRS--FEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165
           H   WD +  F   V KQ  ++  A +Y+        + +++A  +     T+   VA  
Sbjct: 34  HALEWDENHHFPVDVIKQTGELGMASIYVSEESGGSGLGRMDAALIFEALSTACPAVAAY 93

Query: 166 TTPRVHKDWAPKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +      W    F+ E D   +   P+          LTE   G+D AA+ +  +   D
Sbjct: 94  ISIHNMVAWVLDKFADE-DQKQRWLTPLTNFDKLSSYCLTEPGAGSDAAALATSARLDGD 152

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+S +  SD+++++A+  G VG   +   + D    GL +   + K+G R
Sbjct: 153 H-YVLNGVKQFISGAGSSDSYLVMART-GDVGAKGISAFMIDKDTPGLSFGTNEKKMGWR 210

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY-LDSAIMSV-----SGM 328
           +  T ++        +L ++ V   PVED         KI +  LD   +++      G 
Sbjct: 211 AQPTRQV--------MLDNVRV---PVEDRIGDEGTGFKIAMSGLDGGRLNIGACALGGA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L +A+ Y   R   G  L     ++  +A +  D+ AA +  +R A+++D     + 
Sbjct: 260 QSALEKAVTYMSERQAFGAELNQFQALRFEVAGMQADLEAARSFLWRAASAYDANDPNTT 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 +++ + K     ++  V   A++  GG GY+ E  + +  R+   + IL G+  
Sbjct: 320 ------LLSAMAKLKSTDISFDVANRALQIFGGYGYLAEYGVEKLVRDLRVHQILEGTNE 373

Query: 449 AM 450
            M
Sbjct: 374 IM 375


>gi|261753219|ref|ZP_05996928.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|261742972|gb|EEY30898.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 320

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G   F++ +P++D F ++A+    V+G  G  
Sbjct: 60  LTEPDAGSDAASLKTTAVRDGD-FYILNGTNRFITNAPIADIFTVMARTAADVKGADGIS 118

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 119 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 172

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 173 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 232

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 233 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 285

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 286 IERFYRD 292


>gi|229164291|ref|ZP_04292223.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228619174|gb|EEK76068.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 127 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 186 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 234

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A 
Sbjct: 235 GFKVAMANLDVGRIGIGAQALGIAEAALTCAIDYAKEREQFGKPIAAQQGIGFKLADMAT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 295 NVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVSIEAVQVFGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 348 TKDYPVERFFRDAKITQIYEGT 369


>gi|15607385|ref|NP_214758.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium tuberculosis H37Rv]
 gi|15839625|ref|NP_334662.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148660009|ref|YP_001281532.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra]
 gi|148821438|ref|YP_001286192.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11]
 gi|167968966|ref|ZP_02551243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis H37Ra]
 gi|215406242|ref|ZP_03418423.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|215409734|ref|ZP_03418542.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 94_M4241A]
 gi|215448531|ref|ZP_03435283.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|218755985|ref|ZP_03534781.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|219556043|ref|ZP_03535119.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|254233622|ref|ZP_04926948.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C]
 gi|254366690|ref|ZP_04982734.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549185|ref|ZP_05139632.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185108|ref|ZP_05762582.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|260199242|ref|ZP_05766733.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|260203389|ref|ZP_05770880.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289441621|ref|ZP_06431365.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|289445777|ref|ZP_06435521.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|289568148|ref|ZP_06448375.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|289572823|ref|ZP_06453050.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289748014|ref|ZP_06507392.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|289760350|ref|ZP_06519728.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|289764361|ref|ZP_06523739.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|294994719|ref|ZP_06800410.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 210]
 gi|298523712|ref|ZP_07011121.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774335|ref|ZP_07412672.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001]
 gi|306779077|ref|ZP_07417414.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002]
 gi|306782866|ref|ZP_07421188.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003]
 gi|306787234|ref|ZP_07425556.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004]
 gi|306791790|ref|ZP_07430092.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005]
 gi|306795832|ref|ZP_07434134.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006]
 gi|306801830|ref|ZP_07438498.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008]
 gi|306806041|ref|ZP_07442709.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007]
 gi|306970437|ref|ZP_07483098.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009]
 gi|306974668|ref|ZP_07487329.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010]
 gi|307082377|ref|ZP_07491547.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011]
 gi|307082720|ref|ZP_07491833.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012]
 gi|2909448|emb|CAA17336.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE5 [Mycobacterium tuberculosis
           H37Rv]
 gi|13879743|gb|AAK44476.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|124603415|gb|EAY61690.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C]
 gi|134152202|gb|EBA44247.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504161|gb|ABQ71970.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra]
 gi|148719965|gb|ABR04590.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11]
 gi|289414540|gb|EFD11780.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|289418735|gb|EFD15936.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|289537254|gb|EFD41832.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289541901|gb|EFD45550.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|289688542|gb|EFD56030.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|289711867|gb|EFD75883.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|289715914|gb|EFD79926.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|298493506|gb|EFI28800.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308217167|gb|EFO76566.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001]
 gi|308327926|gb|EFP16777.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002]
 gi|308332385|gb|EFP21236.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003]
 gi|308336136|gb|EFP24987.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004]
 gi|308339768|gb|EFP28619.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005]
 gi|308343773|gb|EFP32624.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006]
 gi|308347493|gb|EFP36344.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007]
 gi|308351392|gb|EFP40243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008]
 gi|308352120|gb|EFP40971.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009]
 gi|308356070|gb|EFP44921.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010]
 gi|308360025|gb|EFP48876.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011]
 gi|308367590|gb|EFP56441.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012]
 gi|323717235|gb|EGB26444.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CDC1551A]
 gi|326906000|gb|EGE52933.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis W-148]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  + VP+ L   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|297561734|ref|YP_003680708.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846182|gb|ADH68202.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 385

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 37/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           L+E   G+D +A+T++ +   DG        W      +D + + A+          + C
Sbjct: 127 LSEAASGSDASALTTRAEADGDGYRVNGAKAWITHGGQADYYTLFARTGAPDSGARGISC 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-- 313
           F VP         GL     + K+G  S        S T G LL D+ +    +   +  
Sbjct: 187 FHVP-----ADTPGLGSAAPERKMGMNS--------SITAGVLLDDVRLGADALVGERDR 233

Query: 314 ----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  LDS  + ++   V LA+A     + Y+R RH  G  + D   +   +AD+A 
Sbjct: 234 GFGIALSALDSGRLGIAACAVGLAQAALDAAVDYSRERHQFGTAIGDFQGVGFMLADMAT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +AA+  L    A   D      ++AA A+++A  T       A  V  +A++  GG GY
Sbjct: 294 QVAASRELYLSAARLRDAGLPFGKQAAMAKLLATDT-------AMRVTTDAVQVFGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGS 446
             +  + R+ RE+    I+ G+
Sbjct: 347 TRDFPVERYMREAKVLQIVEGT 368


>gi|212640302|ref|YP_002316822.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212561782|gb|ACJ34837.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 594

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 131/308 (42%), Gaps = 39/308 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTAKLNAEGTHYILNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G +S++T  L   +       LLG+  +  G +    IL
Sbjct: 210 ERDF-----PGVSTGAEEKKMGIKSSSTRTLILQDALVPKENLLGE--IGKGHIIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   + +V G + +L   I YA +R      +    + +  +A +A  + AA +  
Sbjct: 263 NIGRYKLGVGAVGGAKRALEVTIQYANQRQQFKTPISKFTLTQEKLATMASKLYAAESSV 322

Query: 374 FRLANSF--------DEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +R    F        DE     +E A A     I   + K +  +M   ++ E ++  GG
Sbjct: 323 YRTVGLFEARMGQLTDEQAKDGKETAKAIAEYAIECSLNKVFATEMLDYIVDEGVQIHGG 382

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLF 469
            G+++E  I R YR+S  N I  G+     L V            L LL+K   L E+L 
Sbjct: 383 YGFMQEYEIERMYRDSRINRIFEGTNEINRLLVPGMYLRKAMKGELPLLQKAQQLQEELM 442

Query: 470 STLEQDLG 477
             + +++G
Sbjct: 443 MLMPEEVG 450


>gi|262396838|ref|YP_003288691.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262340432|gb|ACY54226.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 335

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 37/308 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   K + PK+     D T+            L ++E   G+D+ ++  + +   D  +
Sbjct: 56  TPSQRKKYLPKLI----DGTHVGA---------LAMSEPNAGSDVISMQLKAENKGDH-F 101

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G+K W  + P +D  ++ A+ +   G   +   + + +  G  + +  +K+G R + 
Sbjct: 102 VLNGNKMWITNGPDADIVVLYAKTDVNAGSRGITAFIVERNVEGFSHAQKLDKLGMRGSN 161

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYA 339
           T EL F+N       +LG+LN     VE +   +  +  +++      M+  +   + Y 
Sbjct: 162 TCELVFNNCVVPKENILGELNQG---VEVLMSGLDYERVVLAAGPLGIMQACMDIVVPYV 218

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD+   ++AA A  + +A + D   +  ++AA A +    
Sbjct: 219 HEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAACDRGNATRKDAAGAIL---- 274

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  ++A  +  +A++ +GG+GYI E    R  R++    I  G+G + +  +L    
Sbjct: 275 ---YSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLYEI--GAGTSEIRRML---- 325

Query: 460 KGTNLFEQ 467
            G  LFE+
Sbjct: 326 IGRELFEE 333


>gi|119508872|ref|ZP_01628024.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414]
 gi|119466401|gb|EAW47286.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414]
          Length = 1205

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 33/348 (9%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
              LTE   G +  AI SQ     DG + L G K W  S+  +    +  + E  +  F+V
Sbjct: 689  FALTETGAGANPQAIESQAISDGDG-WRLRGEKIWSGSAAWAGVINVFVKHESGISGFVV 747

Query: 259  PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELE-FSNTFGFLLGDLNVSTGPVEDMKIL 315
             R    G+P GL        +G R     TV LE    T   LLGD+       +D  + 
Sbjct: 748  RR----GTP-GLRQGGEALTMGMRGMVQNTVYLEDIPVTSAELLGDVGAGMNVAQDAMMY 802

Query: 316  IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              L  A   V GM+  +     Y+ RR ++ G L+D PV+   + ++   I A  +L  R
Sbjct: 803  GRLAIASACVGGMQRCVQLMWRYSERRQIATGKLLDHPVVLYRLQELTNAITAVNSLVMR 862

Query: 376  LANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGYIEERSI 430
            +    D   +            P   Y  CK+ AP    +A    ++ +GG GYIE    
Sbjct: 863  VGKLLDAGDN-----------IPAEVYTACKISAPEFYWQAADLLVQSLGGRGYIESNIA 911

Query: 431  ARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILR 488
             +  R++    I  G    +       +L++G  L   L  TL   ++G   K  +  +R
Sbjct: 912  PQILRDARILRIFEGPTETLCGFLGARVLKQGQTLQNFLCQTLGAVEVGQRLKDAVDKIR 971

Query: 489  DSISLCKEDKGLA--RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +    C +D  +   R++  ++   ++ A L+       A  +++NRF
Sbjct: 972  EC---CCDDANIKVQRWIYHQLGKLATEAILWAVLEEPSATAWVKNRF 1016


>gi|145589736|ref|YP_001156333.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048142|gb|ABP34769.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 383

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+S    + ++  F +     G+ G   
Sbjct: 126 LTEPQAGSEANNLKTRA-VLKDGSWTLNGSKQFVSNGKRAKLAIVFAVTDPELGKKGISA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           FLVP         G    R++ K+G R + T  +          N  G     L ++   
Sbjct: 185 FLVPT-----DTPGFIVNRVEKKLGIRGSDTCAITLDNCVIPEENILGPRGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ Y++ R   G  LID P +   +AD+   I A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFESALKYSKERIQFGVPLIDHPPIAHFLADMHTQINA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A+  +       EA+ A++ A        +M+  V ++A++  GG GY+E+ 
Sbjct: 296 ARLLILQAASMKERGLPCLSEASQAKLFA-------SEMSEVVCSKAIQIYGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 349 PVERYYRDARITQIYEGT 366


>gi|20162439|gb|AAM14583.1|AF494018_2 butyryl-CoA dehydrogenase [Clostridium beijerinckii]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + +G  Y L+G K F+++  +++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   + + S  G    +L+NK+G R+++T EL   N    ++   N+ +   +   I + 
Sbjct: 181 ISAFIVEKSFPGFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGFGIAMK 237

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + +A     EA++Y + R   G  L     ++  IA++ + I AA  
Sbjct: 238 TLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKY 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A      +  S +AA A++ A         +A  V  +A++  GG GY +E  + 
Sbjct: 298 LVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTKEYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKICEIYEGT 365


>gi|85858066|ref|YP_460268.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721157|gb|ABC76100.1| acyl-CoA dehydrogenase, medium-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 384

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 116/263 (44%), Gaps = 34/263 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G  ++E   G+D+ AI ++  K  +  + ++G K W  + P++  +  L + +   G   
Sbjct: 123 GYLVSEPGAGSDVKAIRTKAVKDGND-WVINGTKCWATNGPIASFYSCLCRTKDDKGVQG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLN 303
               L + +  GL   ++++K+G R + T E+              E +N F   + D +
Sbjct: 182 YSFFLVERNTPGLSVGKIEHKMGMRGSQTSEVILEDVRVPAENLLGELNNGFKLAMKDFD 241

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +S   +           A  ++     + A+   Y+R R+  G  L +  ++ + IAD A
Sbjct: 242 MSRPAI-----------AAQALGISEGAFAQMETYSRERYTFGKPLCEHGMITQIIADSA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A   L ++ A+ +D+ K  ++       +A + K++    A  +  +A++  GG G
Sbjct: 291 ALIEAGRGLIYQAADLYDKGKKNTK-------LASMAKFFMGDAAVKITTDAIQVFGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  +  + R +R++    I  G+
Sbjct: 344 YTHDYPVERMFRDAKLTQIFEGA 366


>gi|323489846|ref|ZP_08095070.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323396481|gb|EGA89303.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 588

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 46/341 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219
           +    TP+  + + PK+ S E+              IG   LTE   G+D ++A T+   
Sbjct: 120 ITYFGTPQQKETYLPKLASGEF--------------IGAYCLTEPGAGSDALSAKTTAKL 165

Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
                 Y ++G K F++ +  +D FI+ A+V G         ++E   P GL     + K
Sbjct: 166 NEEKTHYIINGTKMFITNAEFADTFIVYAKVNGTA---FTAFIVEKDHP-GLSLGPEEQK 221

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVS 331
           +G + ++T  + F +       LLG+  +  G +  + +L      L SA M  +  +  
Sbjct: 222 MGIKGSSTRAVIFEDCEVPVENLLGE--IGKGHIIALNVLNLGRYNLGSACMGAA--KYG 277

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-----KSR 386
           L   + Y   R   G  + +    +  +A++AL I A+ +L +R A   + A      S+
Sbjct: 278 LELTLKYTSERRQFGKAIAEFSATQEKLANMALQIYASESLQYRTAGYLESALGDLYDSQ 337

Query: 387 SEEAAYARIMAPITKYWCCKMAPA-----VIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  ++M    +   CK+  +     ++ EA++  GG G+I+E  I + YR+S  N 
Sbjct: 338 DHPEIAKQLMEYAVECAVCKVHGSETLDFIVDEALQLHGGYGFIKEYKIEQLYRDSRINR 397

Query: 442 ILLGSGNA-MVLDVLNLLE---KGTNLFEQLFSTLEQDLGS 478
           I  G+     +L V NLL+   KG    ++L +++ ++L +
Sbjct: 398 IFEGTNEVNRLLIVGNLLKQTAKGKVPLQKLMASVVEELAA 438


>gi|118616886|ref|YP_905218.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99]
 gi|118568996|gb|ABL03747.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99]
          Length = 621

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 174 LTEPDAGSDVGAGRTKAVEQADGSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 233

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL          G+L+
Sbjct: 234 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLI 293

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 294 GEVHEGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 348

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A + +     A++       
Sbjct: 349 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAAHGVDAKLAVKINDL 408

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 409 LLPVVKGVGSEQAYANLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 459


>gi|73537716|ref|YP_298083.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121053|gb|AAZ63239.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 395

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257
             LTE   G+D  ++ +  ++  D  Y L G K F++ +P++D F + A+ E G  G   
Sbjct: 122 FALTEPDAGSDATSLRTTARREGDH-YVLDGTKCFITNAPIADLFTVFARSEPGVAGAPG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   L+E G+P GL     + K+G   +   ++   N          V    +   K   
Sbjct: 181 ISAFLIERGTP-GLTTGPAERKMGQHGSPVGDVYLEN--------CRVPASAIVGGKPGT 231

Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              +A+ +++  R++LA            E + YA RR   G  + D  ++++ IAD   
Sbjct: 232 GFKTAMKALNKQRINLAGLCIGPAVRLVDEMVRYATRRSQFGKPIADYQLVQQMIADSNT 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA AL    A   D  +  + EA+       + K +  +MA  V   A++  GGSGY
Sbjct: 292 ELHAARALVLETARRRDNGEDVTMEAS-------MCKMFASEMAGRVADRAVQVFGGSGY 344

Query: 425 IEERSIARHYRE 436
           +      R YR+
Sbjct: 345 MARTVAERFYRD 356


>gi|134299349|ref|YP_001112845.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134052049|gb|ABO50020.1| Butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
          Length = 378

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 26/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG----CF 256
           LTE   G+D+AA+ +   K+    Y ++G K F+++  ++D F + A V+   G    CF
Sbjct: 124 LTEPGAGSDVAALKTTA-KLEGDEYVINGSKCFITNGGVADIFTVCASVDRSKGHKGLCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   +E   P G+   + +NK+G RS++T ++ F +     +   N+     +  KI +
Sbjct: 183 FI---VEKDRP-GVSVGKKENKLGIRSSSTTDVIFEDV---RIPKENLLGKEGDGFKIAM 235

Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD +   V+ + V +A+A      +YA+ R   G  +     ++  +AD+A+ I AA 
Sbjct: 236 KALDMSRPMVAALAVGVAQAAMEYATNYAKERMAFGKPIAALQGIQFMLADMAMQIEAAR 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  +     D     S       +++ ++K +   M   V  +A++ +GG GYI+E  +
Sbjct: 296 LLVHKACWLKDAGLPYS-------VLSSLSKGFAGDMCMKVTTDAVQVLGGYGYIKEYPV 348

Query: 431 ARHYRESPANSILLGS 446
            ++ R++    I  G+
Sbjct: 349 EKYMRDAKIMQIYEGT 364


>gi|332528868|ref|ZP_08404842.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332041727|gb|EGI78079.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 602

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 146/354 (41%), Gaps = 61/354 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +   L    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYECLQAHGTEAQKKQFLPKLVSGEWLGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGCFLVP- 259
           D+  + ++ +  +DG Y ++G K F+SS  +D       ++LA++    +G  G  L   
Sbjct: 175 DLGLLRTKAEPQADGTYKINGTKIFISSGDNDFTENIVHLVLARLPDAPKGSKGISLFAV 234

Query: 260 ---RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +L  DGS    NG+    L++K+G   NAT ++   N  G L+G       P + ++
Sbjct: 235 SKYQLKADGSLGESNGIYCGGLEHKMGIHGNATCQMVLDNAVGTLVGQ------PHKGLQ 288

Query: 314 -ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGG---------ILIDQPV 354
            + + +++A + V    + L E     A+ YA+     R +SG          I++   V
Sbjct: 289 AMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKEADPIIVHPDV 348

Query: 355 MK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            K     +A A+    +A   AL         + + R +      ++ PI K +      
Sbjct: 349 RKMLLTAKAYAEGGRALACYCALLLDQHLHHPDEQVRQDSDELLALLTPIIKAFLTDNGF 408

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
                  +  GG GYI+E  + +  R++  N I  G+     LD+L     G N
Sbjct: 409 QATVMCQQVFGGHGYIKEWGMEQFVRDARINMIYEGTNTVQSLDLLGRKVLGNN 462


>gi|325299703|ref|YP_004259620.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170]
 gi|324319256|gb|ADY37147.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170]
          Length = 569

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANQCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEGLAYAKDRKQFGKAIIEFPAVYDMLATMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|229176018|ref|ZP_04303513.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228607450|gb|EEK64777.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLVIGKDEHKMGLLGSRTVQLTFE--------DMRV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVGVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|218295830|ref|ZP_03496610.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243568|gb|EED10096.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 387

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 33/282 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   +  A+G  GLTE   G+D AA+ ++ + +  G + L+G K F++   ++  ++++A
Sbjct: 114 PKLASGEALGAWGLTEPGAGSDAAALKTRAEAVPGG-FLLNGTKQFITQGSVAGVYVIMA 172

Query: 248 QV------EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +       E R   +  F   R        GL   R + K+G  ++ T +L   + F   
Sbjct: 173 RTDPAPSPEKRHLGISAFAFFR-----PEKGLRVGRKEEKLGLNASDTAQLLLEDLFVPE 227

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
            G L        D  +L  LD   + ++ M V L  A     + +A+ R   G  + +  
Sbjct: 228 EGLLGERGKGFYD--VLRVLDGGRIGIAAMAVGLGRAALDFALRHAKEREAFGRSIAEFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +A++A ++ AA  L  + A   D  +  + EAA A++ A       C        
Sbjct: 286 GVSFKLAEMATELEAARLLYLKAAELKDAGRPFALEAAQAKLFASEVAVRACD------- 338

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           EA++ +GG GY+++  + R++R++    I  G G + +L V+
Sbjct: 339 EAIQILGGYGYVKDYPVERYWRDARLTRI--GEGTSEILKVV 378


>gi|239828623|ref|YP_002951247.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808916|gb|ACS25981.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 28/272 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           GL+E   G+D++++ ++  +  D  Y L+G K W  +   ++ +++ A  +       + 
Sbjct: 124 GLSEPGAGSDVSSMKTRAVRDGD-YYVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G    + + K+G RS+ T EL F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD     ++   V +A+     AI YA++R   G  + +Q  +   +AD+A  I A
Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A          + +A A++ A  T       A  V  +A++  GG GY ++ 
Sbjct: 295 ARLLTYQAAWLETNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     L +  +L +
Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|46203726|ref|ZP_00051081.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 332

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 49/286 (17%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL+   +P     + PK+    +  T             + LTE   GT
Sbjct: 1   MYPGLTQGAIAALLVHGSPEQKSTYLPKMVEGAWTGT-------------MNLTEPHCGT 47

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 48  DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 107

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    L++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 108 PKFLVNADGSLGERNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGEENRGLAAMFVMM 167

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIAD 361
               L   +  +    V+   A+ YA+ R     +            +I  P ++R +  
Sbjct: 168 NEARLAVGVQGLGQSEVAYQNAVAYAKERLQGRALTGAKEPAKAADPIIVHPDVRRTLMQ 227

Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           I A + AA      TAL+  +A+  ++A+ R        +M P+ K
Sbjct: 228 IRAFNEAARALILWTALNSDIAHRSEDAQQRQAAEDMLGLMTPVVK 273


>gi|158520946|ref|YP_001528816.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509772|gb|ABW66739.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 541

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 47/365 (12%)

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMT----TPRVHKDWAPKIFSREYDPTNKAPM 191
           R  +LYL++Q     L+ P + +  M  L+     TP         I     D  N    
Sbjct: 118 RFIKLYLLSQNSEAGLVCPLICTWGMADLLEKYADTPETRH-----ILEHTRDGIN---- 168

Query: 192 QKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                AIG   ++E +GG+D+ A   +  +  DG + L G K+F S+  +D  ++ A+ +
Sbjct: 169 --GEFAIGAQFVSEIQGGSDVPANLLEAVE-EDGRWRLYGTKFFCSAAHADYSVVTAKPK 225

Query: 251 G--RVGCFLVPRLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           G   V  F++P  L+        NG    RLK K+G     T E+ F+    + +G LN 
Sbjct: 226 GSEEVALFVIPMWLDGNREKEIRNGFTIDRLKWKMGTVELPTAEITFNGAAAYPVGPLNR 285

Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               V  + +    L  +I S  GM   L E   Y   R   G  L D P+M       A
Sbjct: 286 GVANVVGIVLTCSRLALSIGSAGGMARGLREVEKYGEFRTAFGIALKDFPMMAAQYLTNA 345

Query: 364 LDIAAATALSFRLANSFDE---------------AKSRSEEAAY-------ARIMAPITK 401
             +    A +F++  +F E                 S+++E           R +  + K
Sbjct: 346 GCVRRTIAGNFKVYKAFIELPGGLSVGLDGGGLSVSSKADEPPELRKHRFDVRQLILLQK 405

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + A  +    +   GG G +E+  S  R +R+   N +  G  N ++  +    +K
Sbjct: 406 ITVARDAIDLSRLGISAFGGHGVMEDFSSFPRMFRDGMVNELWEGPRNVLLTQLFMDFQK 465

Query: 461 GTNLF 465
             N +
Sbjct: 466 VRNWY 470


>gi|148656424|ref|YP_001276629.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148568534|gb|ABQ90679.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 414

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 44/277 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K        LTE   GTD  A+ +  ++  D  Y L+G K W   + ++D F++ A+
Sbjct: 128 PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGD-YYILNGEKTWISLADIADNFLVFAK 186

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +   G     CF+V R +      G     +  K+G R+         NT   +L D+ 
Sbjct: 187 TDPSKGNRGISCFIVERTMP-----GFSSHPIHGKLGVRA--------GNTGSVILEDVR 233

Query: 304 VSTGPV--------EDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349
           V   PV        E  KI +  LD+   +V+      ++ SL  +I YA+ RH  G  +
Sbjct: 234 V---PVANRVGEEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASIRYAKERHTFGVPI 290

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  ++KR I+ +   +  +  L +R     ++ +  + E   A+  A ++ +       
Sbjct: 291 AEHQLVKRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSFEAAD--- 347

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +A++  G  GY +E  I R+ R +    I  G+
Sbjct: 348 ----DAIQIHGAYGYSDEYPIERYLRNARGAIIYEGT 380


>gi|28872567|ref|NP_795186.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28855822|gb|AAO58881.1| acyl-CoA dehydrogenase, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 393

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|312109623|ref|YP_003987939.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311214724|gb|ADP73328.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 594

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 63/357 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D FI+ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFIVYAKVDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R    G P G+     + K+G +S++T  L   +       LLG+  V  G V    IL
Sbjct: 210 ER----GFP-GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--VGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368
                   + +V G + +L   + YA +R         QP+ K        A +A  + A
Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFSLTQEKFATMASRLYA 317

Query: 369 ATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +  +R    FDE             K  ++  A   I   + K++  +    ++ E +
Sbjct: 318 TESSVYRTVGLFDERMGLLDEEKAKDGKEIAKSIAEYAIECSLNKFFATETLDYIVDEGV 377

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464
           +  GG G+++E  I R YR+S  N I  G+     L V            L LL+K   L
Sbjct: 378 QIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQL 437

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
            E+L     +++G               + +++K L R   +KIAL ++  A  R G
Sbjct: 438 QEELIMLAPEEVGD-------------GVLEQEKYLVRN-AKKIALMAAGLAAQRFG 480


>gi|253797168|ref|YP_003030169.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435]
 gi|289552497|ref|ZP_06441707.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605]
 gi|297632725|ref|ZP_06950505.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207]
 gi|297729699|ref|ZP_06958817.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN R506]
 gi|313657025|ref|ZP_07813905.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN V2475]
 gi|253318671|gb|ACT23274.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435]
 gi|289437129|gb|EFD19622.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605]
 gi|328456955|gb|AEB02378.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  + VP+ L   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|126641862|ref|YP_001084846.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 516

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 74  LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 133

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 134 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 192

Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +   G L+G+       +  M    +I + L +A +  +G       A+ YA+ R V G
Sbjct: 193 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 247

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388
                         LI    ++R +      ++ A AL    A      +S ++A+ R +
Sbjct: 248 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 307

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 308 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 367

Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LD+L     L +G +   L E++ +T+E        K    L+D      +   L R
Sbjct: 368 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIEL------AKAEPSLKDHADQLDQKWQLIR 421

Query: 503 FLTEKI 508
            +TEK+
Sbjct: 422 NVTEKL 427


>gi|1903328|emb|CAB07496.1| butyryl-CoA dehydrogenase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 19/264 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           P+ K       GLTE   GTD A    Q   + DG  Y L+G  +  +   +D +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGSIFITNGGKADIYIIFAM 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + +    G    +++ K+G R+++T EL F +    ++   N+    
Sbjct: 171 TDKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDC---IVPKENLLGKE 227

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++  R+ +A+A     I YA+ R   G  +     ++  IAD+
Sbjct: 228 GEGFKIAMATLDGGRIGIAAQRLGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIADM 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I A+  L +  A         + EAA A++ A  T       A  V  + ++  GG 
Sbjct: 288 ATRINASRWLVYNAAWRKQVGLPYTMEAAMAKLYASET-------AMFVTTKTVQIFGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+ ++  + R  R++    I  G+
Sbjct: 341 GFTKDYPVERFMRDAKITEIYEGT 364


>gi|229076556|ref|ZP_04209516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|229099775|ref|ZP_04230700.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|229118837|ref|ZP_04248186.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228664638|gb|EEL20131.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228683664|gb|EEL37617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228706589|gb|EEL58802.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDN-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    GL   + ++K+G   + TV+L F +    ++   N+     +  K+ +  LD
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFED---MIVPAENLLGEEGQGFKVAMANLD 244

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  + AA  L +
Sbjct: 245 VGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVY 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A+   +     +EA+       I K +  K A  V  EA++  GG GY ++  + R +
Sbjct: 305 RAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFF 357

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 358 RDAKITQIYEGT 369


>gi|52140220|ref|YP_086611.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus E33L]
 gi|51973689|gb|AAU15239.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus E33L]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 122 FALTEPNAGSDAGSLKSRAVKKGD-YYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLFGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A 
Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364


>gi|213968564|ref|ZP_03396707.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301383536|ref|ZP_07231954.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302062586|ref|ZP_07254127.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302130253|ref|ZP_07256243.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213926852|gb|EEB60404.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
          Length = 393

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|171317253|ref|ZP_02906451.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
 gi|171097572|gb|EDT42408.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
          Length = 1268

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 27/275 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255
             +TE   G+   A+TS+ ++I  G + +SGHK W  SS  +   + F   A   G VG 
Sbjct: 734 FAITEPGAGSHPRAMTSRARRIEGGDWLVSGHKCWSGSSAWAGIINVFSRRADGAGMVGL 793

Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313
            + P     G+P   +  + L   +      ++ L+ +  +    LG+L       ++  
Sbjct: 794 AVRP-----GTPGVRIGAEELTMGVRGMIQNSIHLDRARISDACRLGELGQGMTVAQEA- 847

Query: 314 ILIYLDSAIMSV----SGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               ++SA + +    +G+    A+ +H Y  RR ++ G+L+D P+ ++ + D+   IA 
Sbjct: 848 ----MNSARLGIAAICTGVMKRCAQLMHRYGARREIATGLLLDNPLSRQRLGDLRHRIAG 903

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             AL   LAN  D      E+A        I K    ++    + E M+ +GG GYIE  
Sbjct: 904 LNALVDHLANDLDNGGDVPEDALL------IAKILGSELLSQSVDEMMQFLGGRGYIETN 957

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
              + +R++    I  G    +++ + + L  G++
Sbjct: 958 LAPQIFRDARLTRIFEGPTETLLVHLGSRLLNGSD 992


>gi|118480376|ref|YP_897527.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196045417|ref|ZP_03112648.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|229187568|ref|ZP_04314708.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|118419601|gb|ABK88020.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196023624|gb|EDX62300.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|228595935|gb|EEK53615.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I+YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAINYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|120401291|ref|YP_951120.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954109|gb|ABM11114.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 611

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 50/372 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIDGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+     E G P   NG+    +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFHFDPETGEPGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
           G+++     + D+     +     +++ +      A+ YA+ R V G  L          
Sbjct: 284 GEVHEGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKER-VQGADLTQMTDKTAPR 342

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-----EEAAYA--RIMAPI 399
                 P ++R++           AL    A   D   +++      E A     +M PI
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYTATHQDAEVAKALYGIEPELALKVNDLMLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+      D      
Sbjct: 403 VKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462

Query: 457 LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASS 513
           + +KG  L   +   +EQ +   +G   +   R  ++   ED +G+A  LT  + A    
Sbjct: 463 VRDKGVAL-AHVAGQIEQFVKAETGNGRLKAERALLATALEDVQGMAASLTGYLMASQED 521

Query: 514 AAALYRAGMNDI 525
           A ++Y+ G+  +
Sbjct: 522 AKSIYKVGLGSV 533


>gi|328770903|gb|EGF80944.1| hypothetical protein BATDEDRAFT_24489 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 406

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 35/259 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D   + ++  K+  G Y L+G K W  +SP++D F++ A
Sbjct: 133 PDLATGKKIGAFGLTEPNHGSDPGGMETRATKLG-GTYVLNGSKTWISNSPIADVFVVWA 191

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLL 299
           +  +  +  F    +LE G P GL    +K K+  R++ T       VE+  SN    + 
Sbjct: 192 KTDDNEIRGF----ILERGMP-GLETPTIKGKLSLRASCTGMIMMDDVEIPVSNMLPLVK 246

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           G L   TGP         L++A   ++   +  AE     A  Y   R   G  L    +
Sbjct: 247 G-LKACTGP------FGCLNNARFGIAWGALGAAESCVESAREYVLNRKQFGVPLARFQL 299

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ +AD   +I  AT  ++++    D+ K+  E       M    K   C  A A+  +
Sbjct: 300 IQKKLADAVSEIGLATMAAYQVGRLKDQDKAAPE-------MISTVKRNSCGKALAIARD 352

Query: 415 AMECIGGSGYIEERSIARH 433
             + +GG+G  +E  I RH
Sbjct: 353 CRDMLGGNGISDEYHIIRH 371


>gi|295399926|ref|ZP_06809907.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978329|gb|EFG53926.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 381

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 51/297 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK  S E             +   + +TE   G+D+A I++   K  D  Y ++G 
Sbjct: 108 RKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGDH-YIVNGQ 153

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRLKNKIG 280
           K F+++ +    +++A       C   P            ++E  +P G    R  +K+G
Sbjct: 154 KTFITNGIHADLVIVA-------CKTDPNAKPSHKGISLLVVERDTP-GFTRGRKLDKVG 205

Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             +  T EL F        N  G            ++  ++++    AI + +   V   
Sbjct: 206 LHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIV----AIAAQTAAEVMFE 261

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y ++R   G  + +   ++  +A+++ +I         +     + K+     + A
Sbjct: 262 LTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQGKNVVTHVSMA 321

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                  K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I  G+   M
Sbjct: 322 -------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371


>gi|294628534|ref|ZP_06707094.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831867|gb|EFF90216.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 383

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 43/301 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A        + W P + S EY              +G  GLTE   G+D  ++ ++
Sbjct: 95  AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGSLATR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G K F+++   +D  ++ A+     G   V   L      GL  + + 
Sbjct: 141 AVRDGDD-YVINGAKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPADTPGLTRRTIH 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI----MSVSGMRV 330
            K+G R  AT EL        +L D+ V    +   + K      SA+    MSV+   V
Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASAMLAPEGKGFAVAMSALAKGRMSVAAGCV 251

Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D    
Sbjct: 252 GIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIAVDVDAARLLTWRVADLIDRGLP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E++ A++ A        + A      A++  GG GYI+E    +  R++   ++  G
Sbjct: 312 FAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYEG 364

Query: 446 S 446
           +
Sbjct: 365 T 365


>gi|302894009|ref|XP_003045885.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726812|gb|EEU40172.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 442

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 39/305 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P + K W P++               T+      L+E   G+D  A+ ++  + +DG  
Sbjct: 162 SPALKKKWLPRL--------------ATNTVASFCLSEPVSGSDAFALATKATETADGFK 207

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
              G  W  +S  S  FI+ A ++   G   +   L+E G+P G    + + K+G R+++
Sbjct: 208 INGGKMWITNSMESGLFIVFANLDPSKGYKGITAFLVEKGTP-GFSIAKKEKKLGIRASS 266

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAI 336
           T  +   +       LLG+           K  I  L+   + ++     LA      A 
Sbjct: 267 TCVINLDDVVVPKENLLGERG------HGYKYAISLLNEGRIGIAAQMTGLALGAWENAA 320

Query: 337 HYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            Y        G L+ +   M+  IA    +IAAA AL +  A   +  ++   +AA A++
Sbjct: 321 RYVWNDRKQFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGENFVRDAAMAKL 380

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  +  ++A  V   A+E +GG G++ E    +++R+S   +I  G+ N  +  + 
Sbjct: 381 -------YASQVAGRVSGLAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIA 433

Query: 456 NLLEK 460
            LL+K
Sbjct: 434 KLLQK 438


>gi|170742081|ref|YP_001770736.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168196355|gb|ACA18302.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 376

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+T++ +++ +  Y LSG K F++S  S D  I+ A  +   G      
Sbjct: 122 LTEPGAGSDAGAVTARARRVGN-RYVLSGTKQFITSGRSADLAIVFAVTDPEAGKRGISA 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGP 308
           F+VP      +P G    R+++K+G R++ T ++ F +   T   LLG     L ++   
Sbjct: 181 FIVP----TATP-GYRVARIEHKLGQRASDTAQIVFEDMELTPDLLLGQEGEGLRIALSN 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  +V   R +   A+ YA  R   G  L     +   +AD+A  I A
Sbjct: 236 LEGGRIGI----AAQAVGMARAAFEAALAYAGERETFGQKLTAHQAVAFRLADMATRIEA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A   D  +   +EAA A++ A        +MA AV ++A++  GG GY+ + 
Sbjct: 292 ARLLVHNAARLRDAGQPCLKEAAMAKLFA-------SEMAEAVCSDAIQIHGGYGYLADY 344

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 345 PVERIYRDVRVCQIYEGTSD 364


>gi|114047887|ref|YP_738437.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7]
 gi|113889329|gb|ABI43380.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7]
          Length = 389

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|308048737|ref|YP_003912303.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307630927|gb|ADN75229.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 27/303 (8%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MVA   T  +   W P + + E   +               LTE   G+D A++ ++ ++
Sbjct: 96  MVASWGTETLKDQWCPSLVTGEKLAS-------------YCLTEPGAGSDAASLRTKAER 142

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D  Y ++G K F+S   +   +++    G  G   +  +       G+ Y + ++K+G
Sbjct: 143 DGDH-YVINGSKMFISGAGATELLVVMCRTGEDGPKGISAIAVPADAEGISYGKAEDKMG 201

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335
             +  T  + F N       LLG+     G    MK L    ++ A  S+   + +L  A
Sbjct: 202 WNAQPTRLVTFENVRVPVANLLGE--EGQGFTFAMKGLDGGRINIAACSLGTAQAALERA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L     ++  +AD+A ++ AA  +  RLA +F    +  E+ AY   
Sbjct: 260 QQYMTERKQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLDSNDPEKTAYC-- 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K +   +   V  EA++  GG GYI E  + RH R+   + IL G+   M L V 
Sbjct: 316 --AMAKRFATDVGFTVCNEALQIHGGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIVA 373

Query: 456 NLL 458
             L
Sbjct: 374 RRL 376


>gi|240171199|ref|ZP_04749858.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 129/317 (40%), Gaps = 48/317 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   V +  ++AL TT    + W PK  S E             +   + +TE   G
Sbjct: 93  GFGLHNDVVAPYLLAL-TTEEQKQRWLPKFCSGE-------------LITAIAMTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+ +   
Sbjct: 139 SDLQGIKTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLVVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313
            G    R  +KIG  +  T EL F++               F +L+ +L     P E + 
Sbjct: 198 QGFERGRHLDKIGLDAQDTAELSFTDVKVPAENLLGEEGMGFIYLMQNL-----PQERIS 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I      AIM+ +GM   L + + Y R R   G  +      +  +A++A +      + 
Sbjct: 253 I------AIMAAAGMEAVLEQTLQYVRERKAFGKPIGSFQNNRFVLAELATEATVVRIMV 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   E K   E+AA A       K++  +    +    ++  GG GY+ E  +AR 
Sbjct: 307 DEFIALHLEGKLTVEQAAMA-------KWYSTEKQVYLNDRCLQLHGGYGYMREYPVARA 359

Query: 434 YRESPANSILLGSGNAM 450
           Y ++   +I  G+   M
Sbjct: 360 YLDARVQTIYGGTTEIM 376


>gi|209518224|ref|ZP_03267051.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209501339|gb|EEA01368.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 376

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S  + D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGDVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP      +  G    R+++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----ATPGYVVARVEDKLGQHSSDTAQIVFEACRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGDGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  + AA  L +  A+  D       EAA A++ A        + A  + + A+
Sbjct: 281 FRLAEMATQLEAARQLIWHAASLKDAGLPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|126726340|ref|ZP_01742181.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126704203|gb|EBA03295.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 380

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 29/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + +DG + L+G K F+S    SDA+I++A+        +   
Sbjct: 124 LTEPGSGSDAAALKTRADRTNDG-FNLTGTKAFISGGGYSDAYIVMARTGDAGPSGVSAM 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
           L+EDGS  GL +  L++K+G RS  T +++  N         N+ T  +  E+ K   Y 
Sbjct: 183 LVEDGS-EGLSFGGLEDKMGWRSQPTRQVQLDNC--------NIPTANLLGEEGKGFTYA 233

Query: 318 ---LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   +++S   +  A+A     + Y   R   G  +     ++  +AD  +++ AA
Sbjct: 234 MKGLDGGRLNISACSLGAAQAAMDTTLAYMGERKAFGKTIDQFQALQFRLADNEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D   + S +A+    MA   K    ++   V+   ++  GG GY+ +  
Sbjct: 294 RTFLRQAAWKLD---TGSPDASKFCAMA---KKHATEVGSRVVDSCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLLE 459
           + +  R+   + IL G+   M L V  NLL+
Sbjct: 348 LEKLVRDLRVHQILEGTNEIMRLIVARNLLK 378


>gi|24666513|ref|NP_649069.2| CG3902 [Drosophila melanogaster]
 gi|7293851|gb|AAF49216.1| CG3902 [Drosophila melanogaster]
 gi|201066169|gb|ACH92494.1| FI09602p [Drosophila melanogaster]
          Length = 414

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T +L F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       KY+  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|83950248|ref|ZP_00958981.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83838147|gb|EAP77443.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 34/274 (12%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P+ +   AI    LTE   G+D+A  T    +  D  Y L+G K W  +  ++  + + A
Sbjct: 117 PLVRRGEAISAFALTEPASGSDVANSTMTATRDGDD-YILNGEKTWISNGGIASVYTLFA 175

Query: 248 QVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-EFSNTFGFLLGD 301
           + E   G      F+VP     G P     +RL+  I     AT+   E       ++G 
Sbjct: 176 RSEDMPGAKGLSAFVVPA----GLPGFEVSERLET-IAPHPLATLRFTECRIPVSAMIGK 230

Query: 302 LNVSTGPVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                 P E  KI +  LD      A  ++   R +L E++   R+RHV G  L +  ++
Sbjct: 231 ------PGEGFKIAMSVLDVFRSTVAAAALGFARRALDESLDRVRKRHVQGAPLAELQMV 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +  IAD+ALDI A+  L +R A + D   +R + EAA A       K +  + A  VI  
Sbjct: 285 QGHIADMALDIDASALLVYRAAWAKDSGAARVTREAAMA-------KLFSTEQAQKVIDR 337

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++  GG G      + R YRE  A  I  G+ +
Sbjct: 338 AVQLHGGDGVRSGAVVERLYREIRALRIYEGASD 371


>gi|150015212|ref|YP_001307466.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901677|gb|ABR32510.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + +G  Y L+G K F+++  +++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   + + S  G    +L+NK+G R+++T EL   N    ++   N+ +   +   I + 
Sbjct: 181 ISAFIVEKSFPGFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGFGIAMK 237

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + +A     EA++Y + R   G  L     ++  IA++ + I AA  
Sbjct: 238 TLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKY 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A      +  S +AA A++ A         +A  V  +A++  GG GY +E  + 
Sbjct: 298 LVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTKEYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKICEIYEGT 365


>gi|113970657|ref|YP_734450.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4]
 gi|113885341|gb|ABI39393.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4]
          Length = 389

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGDH-YILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|315048815|ref|XP_003173782.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311341749|gb|EFR00952.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 431

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ ++ + + DG + L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG LN      + +++L+    L+  ++S      M+  L   + Y   R   G 
Sbjct: 262 PHANVLGKLN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D++   S+              +  + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARHVDQSAVSSDGTQVKTQDCAGAILYAAER 375

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 376 ATECTLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414


>gi|326319041|ref|YP_004236713.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375877|gb|ADX48146.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 376

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D  Y + G K F++S  +    ++  V
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVIAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296
             R      +  F+VP         G    RL++K+G  S+ T ++ F        N  G
Sbjct: 170 TDRAAGKRGMSAFIVPT-----DTPGYVVARLEDKLGQHSSDTAQILFEGCRIPVENRIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I   S  M+ S   V    A+ YA+ R   G  +     + 
Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDV----AVQYAKERESFGQPIFQHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A  + AA  L +  A   D  +   +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG G + +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365


>gi|167524186|ref|XP_001746429.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775191|gb|EDQ88816.1| predicted protein [Monosiga brevicollis MX1]
          Length = 418

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D  ++ ++ + + DG Y L+G K W  ++P++D FI+ A
Sbjct: 149 PRLATGELVGAFGLTEPDHGSDPGSMATKAKAV-DGGYLLNGSKTWITNAPIADVFIIWA 207

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
            ++G +  F+V R   DGS  GL   +++ K+  R++ T ++   N F     L   +  
Sbjct: 208 NLDGDIRGFVVER---DGS-EGLTTPKIEGKLSLRASITGQIMLDNVFVPEENLFPTVKG 263

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
             GP         L++A   ++   +  AE     A  Y   R   G  L    +M++  
Sbjct: 264 LKGP------FGCLNNARYGIAWGALGAAESCFEVARQYTLDRQQFGRPLAANQLMQKKF 317

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        R+       + R E   +   +  + K   C  A  +     + +
Sbjct: 318 ADMLTEINIGLQACLRV------GRLREEHGEFTPDLVSMIKRNSCGKALDIARMTRDML 371

Query: 420 GGSGYIEERSIARH 433
           GG+G  E+  + RH
Sbjct: 372 GGNGISEDYHVLRH 385


>gi|16182654|gb|AAL13543.1| GH07925p [Drosophila melanogaster]
          Length = 414

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T +L F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       KY+  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|117920119|ref|YP_869311.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3]
 gi|117612451|gb|ABK47905.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3]
          Length = 389

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|225677560|gb|EEH15844.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 439

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 21/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259
           L+E   G+D  A+ ++  K S G Y ++G K W  +S  +  FI+ A ++   G   +  
Sbjct: 180 LSEPASGSDAFALQTKAVKTSSG-YKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 238

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
            ++E G+P G    + + K+G R+++T       VE+   N  G        +   + + 
Sbjct: 239 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLIGVEGQGYKYAINLLNEG 297

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I      +++ G   + A+ I   RR+   G ++ +   M+  +A    +IAAA AL
Sbjct: 298 RIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVAQAYTEIAAARAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    +
Sbjct: 355 VFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEK 407

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            +R+S   +I  G+ N  +  +  LL+K
Sbjct: 408 MFRDSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|325914364|ref|ZP_08176711.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539372|gb|EGD11021.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 387

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G + V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI +   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|229105934|ref|ZP_04236558.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228677508|gb|EEL31761.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 381

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDN-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    GL   + ++K+G   + TV+L F +    ++   N+     +  K+ +  LD
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFED---MIVPAENLLGEEGQGFKVAMANLD 244

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  + AA  L +
Sbjct: 245 VGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVY 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A+   +     +EA+       I K +  K A  V  EA++  GG GY ++  + R +
Sbjct: 305 RAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFF 357

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 358 RDAKITQIYEGT 369


>gi|332981892|ref|YP_004463333.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON]
 gi|332699570|gb|AEE96511.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 41/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D++ I +   K  D  Y L+G K W  +   +D +++LA      G    
Sbjct: 122 FALTEANAGSDVSGIQTMAVKDGD-YYILNGTKQWITNGGEADVYVVLAVTNRSKGSRGF 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
              + +    GL + + + K+G R++AT E+ F++              GF++   N   
Sbjct: 181 SAFIVEKDTPGLSFGKKEKKLGIRASATREVIFTDCRIPKENILGKEGMGFIVAMKN--- 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
                       D     +    V +A+     A  YA +R+  G  +     ++  +AD
Sbjct: 238 -----------FDRTRPGIGAQAVGIAQGALDYAASYAHQRYQFGQPISSFQAIQHMLAD 286

Query: 362 IALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +A    AA AL +  A   D  AK  S+E++ A++ A         +A  V  +A++ +G
Sbjct: 287 MATQTEAARALVYATARMIDAGAKDFSKESSMAKVFA-------SDVAMKVTTDAVQILG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ +  + +  R++    I  G+
Sbjct: 340 GYGYMRDYPVEKMMRDAKITQIYEGT 365


>gi|313680955|ref|YP_004058694.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313153670|gb|ADR37521.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 389

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 31/269 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252
           GLTE   G+D AA++++ ++ +DG + L+G K F++   ++  +++ A+     EG+   
Sbjct: 127 GLTEPGAGSDAAALSTRAEE-ADGGWVLNGTKQFITQGSVAGVYVINARTDPAPEGKPHR 185

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F+ P     G+P GL   R ++K+G RS+ T +L F +    L  D  V       
Sbjct: 186 GISTFVFP----AGTP-GLTIGRKEDKLGLRSSDTAQLIFEDLR--LPADALVGERGRGF 238

Query: 312 MKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +L  LD      A +SV   R +L  A  YA  R   G  +     +   +A ++ D+
Sbjct: 239 YTVLRVLDGGRVGIAALSVGLGRAALEFAARYAGERRQFGRPIGRFEGVGFQLAQMSTDL 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  + A   D  +  +  AA A++ A        ++A      A++ +GG GYI+
Sbjct: 299 EAARMLYLKAAELKDAGRDYTLAAAQAKLFA-------SEVATRAADAAIQILGGYGYIK 351

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  + R++R+     + +G G + +L ++
Sbjct: 352 DYPVERYWRD--VRLMRIGEGTSEILKLV 378


>gi|157374614|ref|YP_001473214.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157316988|gb|ABV36086.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 18/258 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G  G   +  +
Sbjct: 124 LTEAGAGSDAASLKTKAVRDGDE-YVISGAKMFISGAGATELLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
           +      G+ Y + ++K+G  +  T E+ F       SN  G        +   ++  +I
Sbjct: 183 VVPADAAGITYGKAEDKMGWNAQPTREITFDKVRVPVSNLLGEEGQGFTFAMKGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  L  
Sbjct: 243 NI----ATCSIGTAQAALERATQYMNERKQFGKPIAAFQALQFKLADMATELVAARQL-V 297

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA +F   +   E  AY      + K +   +   V   A++  GG GYI E  + RH 
Sbjct: 298 RLA-AFKLDEKDPEATAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHV 352

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + IL G+   M L
Sbjct: 353 RDVRVHQILEGTNEIMRL 370


>gi|300771433|ref|ZP_07081308.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761422|gb|EFK58243.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 386

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  A+ ++  K  DG Y L+G K W  ++P+ D  ++ A
Sbjct: 120 PKLATGELIGSFGLTEPNHGSDPGAMETRLSKDGDG-YILTGAKMWITNAPVCDLAVVWA 178

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  EG+V   +V R +     NG       NK   R++ T EL F +       +L D++
Sbjct: 179 RDEEGKVKGIIVERGM-----NGFTTPETHNKWSLRASKTGELIFEDVRIPQANILPDVS 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
              GP      L  L+SA   +S   +  A      A+ Y+  R   G  +    + ++ 
Sbjct: 234 SMKGP------LSCLNSARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+   +I  A  LS+RL    +E K+  ++ + A       K     MA  +  E+ + 
Sbjct: 288 LAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMA-------KRNNVNMALQIARESRQM 340

Query: 419 IGGSGYIEERSIARH 433
           +G  G + E  I RH
Sbjct: 341 LGAMGIVGEFPIMRH 355


>gi|85375042|ref|YP_459104.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84788125|gb|ABC64307.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 387

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 26/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255
           + +TE   G+D+ +IT+   K  +G Y ++G K ++S+  +  FI++       E   G 
Sbjct: 131 IAMTEPGVGSDLQSITTTALKDGNG-YRINGAKTYISNGQTADFIVVVAKTDPNERAKGI 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS-----TG 307
            L+  LLE     G    +  +KIG  +  T EL F N F     +LG +         G
Sbjct: 190 SLM--LLETEGAEGFQRGKKLDKIGLDAADTSELFFDNVFVPAENVLGGVEGKGFYQLMG 247

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +++I + +A    +G+  +L   + Y + R   G  + D    +  +AD+    A
Sbjct: 248 ELAQERLVIAMGAA----TGIEKALEVTLEYVKERKAFGQTIWDFQNTQFVLADLK---A 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             TA    + +    AK    E   A   A + KYW  ++   V+ + ++  GG+GYI E
Sbjct: 301 RGTAARVFVNDCI--AKLLKGELDVA--TAAMAKYWVTELQSEVVDKCLQLHGGAGYINE 356

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             IA+ YR++    I  GS   M
Sbjct: 357 YPIAKMYRDARITRIFGGSNEVM 379


>gi|134298228|ref|YP_001111724.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           reducens MI-1]
 gi|134050928|gb|ABO48899.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 586

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  A  ++     DG  Y L+G K F++ +  +D F++ A+++G +   F+V
Sbjct: 145 LTEPMAGSDALAAKTKAVLTEDGKYYVLNGEKIFITNASFADVFVVYAKIDGEKFTAFIV 204

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R     +P G      + K+G + ++T  L F +       LLG+  +  G V    IL
Sbjct: 205 DR----DTP-GFSIGPEEKKLGIKGSSTCSLIFEDAKVPVENLLGE--IGKGHVIAFNIL 257

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   + SV   + +++ A  YA  R   G  +    +++  +A +A    A+ +L 
Sbjct: 258 NIGRYKLGLGSVGLSKSAISYATKYALERQQFGIPIAKFGMIQNKLAQMAAKTYASESLI 317

Query: 374 FRLANSFDEA-----KSRSEEAA---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +RL  + +EA       R   AA   YA +   I+K  C +    V  EA++  GG GY 
Sbjct: 318 YRLVGNIEEALHGKVDGREIGAAIEEYA-VECSISKVHCSESLAYVTDEAVQIYGGYGYT 376

Query: 426 EERSIARHYRESPANSILLGS 446
           +E    R YR++  N I  G+
Sbjct: 377 QEFPAERMYRDARINRIFEGT 397


>gi|333024237|ref|ZP_08452301.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744089|gb|EGJ74530.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 606

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 51/324 (15%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           SRE   T   PM +      + L+E + G+ +A + ++ +   DG Y L G+K ++S   
Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTYRLFGNKMWISGGD 209

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRS 283
            +       ++LA+  G       +  F+VP+ L DG     + N +    L +K+G R 
Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGARNDVVLAGLNHKMGYRG 269

Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329
                L F              G L+G+ N     +  M    +I + L +  +  +G  
Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328

Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378
                A+ YAR R     +    P            ++R +      +  A AL+     
Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             DE ++  E AA         I+ PI K W  +      + A++  GG GY  E  + +
Sbjct: 386 LVDEQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
            YR++  N I  G+     LD+L 
Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469


>gi|301118951|ref|XP_002907203.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans
           T30-4]
 gi|262105715|gb|EEY63767.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans
           T30-4]
          Length = 425

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 18/251 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS------SPMSDAFIMLAQV-- 249
           G+ ++E   GTD+  + +  +K   G  Y L+G K +++      + + D F++ A+   
Sbjct: 155 GMAMSEPSVGTDVLGMRTTAKKSDCGKFYLLNGTKMWITNGALDDTELGDTFLVYARTGN 214

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G+        L+E G       QR+K+K G R++ T EL F N    +   +      V
Sbjct: 215 SGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAV 274

Query: 310 EDMKILIYLDS---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M   + ++    A MS+   R SL    +YA+ R   G  L +   +++ IA+   + 
Sbjct: 275 LCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGQPLNNFGQIQKNIAESYAEY 334

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A  +      + A+    ++   R+     K +C  MA  V   A++ +GG GY+ 
Sbjct: 335 MAGRAYVY------NTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVG 388

Query: 427 ERSIARHYRES 437
           E ++ R +R+S
Sbjct: 389 EYNVERLWRDS 399


>gi|302530491|ref|ZP_07282833.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302439386|gb|EFL11202.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 33/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256
           L+E   G+D AA++++  ++S+  Y ++G K W   + ++D +  + +     G    C 
Sbjct: 127 LSETHAGSDAAALSTRA-RLSEDEYVVNGTKAWITHAGVADFYTTMVRTSDDGGHGISCL 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV     D S  GL     + K+G   + T +L F +       L+G      G    +K
Sbjct: 186 LV-----DSSTPGLSAAPRERKMGLTGSPTAQLLFEDARVPADRLIG------GKGSGLK 234

Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L S  + ++   V LA     EA+ YA+ R   G  ++D   M+  +AD+A  + 
Sbjct: 235 IALASLSSGRLGIAACAVGLAQAALDEAVEYAKGRTQFGRPIVDFQGMEFLLADMAATVE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A       A   D A+ R     + R  + I K      A  V  +A++ +GG+GY  +
Sbjct: 295 SAR------ATYLDAARRRDRGLDFQR-QSSIAKLVATDGAMKVTTDAVQVLGGAGYTRD 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ RE+    I  G+
Sbjct: 348 FPVERYMREAKVPQIFEGT 366


>gi|229085825|ref|ZP_04218052.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-44]
 gi|228697492|gb|EEL50250.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-44]
          Length = 386

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 37/278 (13%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
           ++ W P++F+   D   K  +           TE + G+       +   I  G  + ++
Sbjct: 101 NRSWKPEMFAWFCDEVKKGAL------FNRAATEPKTGSPTRGGKPETLAIQKGDTWIIN 154

Query: 230 GHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           G K F + +P+ D FI+ A +EGR  +G F++PR        G+  +   + +  R  A+
Sbjct: 155 GRKTFTTMAPVLDYFIISASIEGREEIGEFVIPR-----HEQGVLIEETWDSVAMRGTAS 209

Query: 287 VEL-----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            +L     E  N F     D+  S    + +  L+++ +  + ++  + +   AIH+A+ 
Sbjct: 210 HDLVLQNVEIPNKF---FTDVKGSKSKPKGIGWLLHIPACYLGIA--QAARNYAIHFAKT 264

Query: 342 RHVSG-----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
              +      G+L   P ++R + ++ L++  A    +++A  +DE + +  ++  A + 
Sbjct: 265 YQPNSLSHPIGLL---PSIRRLVGELELELMQARTFLYQIAKRYDEVEDK--QSLQAELA 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A   KY     A +V+ +AM  +G     E+  + R+Y
Sbjct: 320 A--AKYIATNAAISVVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|225686072|ref|YP_002734044.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256262803|ref|ZP_05465335.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642177|gb|ACO02090.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263092625|gb|EEZ16846.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410399|gb|ADZ67463.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326553692|gb|ADZ88331.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 384

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LT+   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTKPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T  + F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|254459770|ref|ZP_05073186.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206676359|gb|EDZ40846.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 387

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLHAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F +    F  +LG+        + +++L
Sbjct: 187 TAFLIEKSMTGFSTSNHFDKLGMRGSNTAELIFEDVQVPFENVLGEEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M   L E + Y   R   G  + +  +M+  IAD+   +  A
Sbjct: 241 MSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKIADMYTKMNTA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D+ +   ++AA   +       +  + A  V  +A++ +GG+G++ +  
Sbjct: 301 RAYVYEVAKACDKGQVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGFLNDSP 353

Query: 430 IARHYRESPANSILLGS 446
           +AR +R++    I  G+
Sbjct: 354 VARIFRDAKLMEIGAGT 370


>gi|29833142|ref|NP_827776.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610264|dbj|BAC74311.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 383

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 59/309 (19%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  +A   +    + W P + S  Y              +G  GLTE   G+D   +T++
Sbjct: 95  AKTIAYWGSEEQKRQWLPGLTSGAY--------------VGCFGLTEPGTGSDAGNLTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +  D  Y ++G K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVPT-----DTPGLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322
            + +  K+G R  AT EL        +L D+ V   P   M           +  L    
Sbjct: 195 RRPIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243

Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           MSV+   V +A+A     + YA  R   G  +    +++  I+DIA+D+ AA  L++R+A
Sbjct: 244 MSVAAGCVGIAQAALDVAVKYATEREQFGKTIAHHQLVQELISDIAVDVDAARLLTWRVA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D  +  +  ++ A++ A        + A      A++  GG GYI+E    +  R++
Sbjct: 304 DLVDRGQPFATASSQAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDA 356

Query: 438 PANSILLGS 446
              ++  G+
Sbjct: 357 RVMTLYEGT 365


>gi|83312698|ref|YP_422962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947539|dbj|BAE52403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 378

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ 248
           PM +        LTE   G+D A+I ++ ++  D  Y LSG K F+S+  +    I+ A 
Sbjct: 111 PMARGEKLGCFCLTEPEAGSDAASIRTRARRDGDH-YVLSGAKQFISTAKNGQVAIVFAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            + + G      F+VP         G    R+++K+G   + T +L F       S   G
Sbjct: 170 TDPQAGKRGISAFVVPT-----DTPGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASRRLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  ++ I    A  SV   R +L  A+ YA+ R   G  + +   + 
Sbjct: 225 EEGDGLKIALANLEGGRLGI----AAQSVGMARSALDHALAYAKERKQFGKPIFEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  +  A  +    A+  D      +EA+ A++ A        +MA  V ++A+
Sbjct: 281 FRLADMATRVEVAEQMVLHAASLRDAGLPCLKEASMAKLFA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLADFPVERIYRDVRVCQIYEGTSD 365


>gi|308449818|ref|XP_003088087.1| hypothetical protein CRE_12446 [Caenorhabditis remanei]
 gi|308249638|gb|EFO93590.1| hypothetical protein CRE_12446 [Caenorhabditis remanei]
          Length = 593

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 126/316 (39%), Gaps = 47/316 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNQDGTYNITGTKI 196

Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++     ++D  I L       A    R +  F+VP+ L +     G  N      +++
Sbjct: 197 FITGGDHDLADNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSLGERNTAGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    GFL+G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDAAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEYAYQNAAQ 316

Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA    + R  +G    ++P         ++R + +   +  A+ A +  +    D  K 
Sbjct: 317 YATDRVQGRSATGVKSPNKPADSILVHGDVRRMLLNARANNEASRAFAVYVGQQLDITKF 376

Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++  A A+      ++ PI K +    A     +A    GG GYI E  + +  R+   
Sbjct: 377 STDPEAVAKANNRVALLTPIAKAYLTDTAFNAAIDAQMVFGGHGYIREWGMEQCVRDLRI 436

Query: 440 NSILLGSGNAMVLDVL 455
             I  G+      D++
Sbjct: 437 AQIYEGTNGVQSQDLI 452


>gi|254295049|ref|YP_003061072.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043580|gb|ACT60375.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 377

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVG--C 255
           LTE   G+D A++ ++   K  D  Y L+G K F+S    SD ++++A+   EG  G   
Sbjct: 123 LTEPNSGSDAASLQTKAVLKGED--YVLNGSKIFISGGNFSDIYVVMARTSDEGARGIST 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           F+VP+        GL + + + K+G R+  T  + F       SN  G +      +   
Sbjct: 181 FVVPK-----DAPGLSFGKNEEKMGWRAQPTCMVNFDDCRIPASNLVGVIGEGFKYAMAG 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++ I    A  S+ G + +L  AI Y + R   G  + D    +  +AD+ +D+ A
Sbjct: 236 LDGGRLNI----ASASLGGAQEALDRAIAYTKDRKQFGKSISDFQATQFKLADMDIDLRA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A+ +  A   D     +  A  A       K +       +  EA++  GG GY+ E 
Sbjct: 292 CRAMLYEAARKLDANAPDATPACAA------AKRFVTDKGFDIANEALQLHGGYGYLSEY 345

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I R  R+   + IL G+   M
Sbjct: 346 EIERIVRDLRVHKILEGTNEVM 367


>gi|229124846|ref|ZP_04254024.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228658637|gb|EEL14299.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
          Length = 381

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   V  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGVSA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|297196619|ref|ZP_06914017.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153309|gb|EFH32283.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 381

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 21/282 (7%)

Query: 190 PMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P+  +  AIG   +TE  GG+D  A+T++ ++  D  + L+G K F+S+ P++D F++ A
Sbjct: 112 PLISSGEAIGAHAITESEGGSDAMAMTTRAERDGDH-FVLNGSKTFVSNGPVADVFVVYA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLG 300
           +     G   V   L D    GL   +   K+G R++   EL F +         G + G
Sbjct: 171 RTRPDGGALGVSAFLVDRDTPGLTVGKPIKKMGLRTSPLSELYFDDCRIPRTRVLGRVGG 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              V    ++ +     L S +++   M+  L   + YA+ R   G  +     +   I 
Sbjct: 231 GFIV----LDHVMKREVLFSFVVNAGEMQHRLDRCLEYAKTRRSFGKPIGSHQSIANKIV 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D  + +  A    +  A   D+ ++ + + A A+++         +   A    A++  G
Sbjct: 287 DTKIGLETARKWLYDTAQRLDDGENVTIDLAIAKLL-------TSQANVASSLAAVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           G GY+ E  + +  R +   +I  G+       + ++L  GT
Sbjct: 340 GHGYMSEYGLEQGVRNAVGGTIYSGTNEIQYNRIASMLGLGT 381


>gi|296140521|ref|YP_003647764.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028655|gb|ADG79425.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 391

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 26/270 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  +K  D  Y ++G K F++S +   +++ A   G  G   + 
Sbjct: 126 LAITEPGGGSDVGHLTTTARKDGD-HYIVNGAKTFITSGVRADWVVTAVRTGGEGAAGIS 184

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKI 314
            L +  G P       LK K+G  ++ T EL F+        D+ V      GP     +
Sbjct: 185 LLVIPKGLPGFEVSAPLK-KLGWHASDTAELSFT--------DVRVPAENLIGPEGSGFL 235

Query: 315 LI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           LI        L  A+ + S  +  L   + + R+R   G  LI +  ++  + ++   I 
Sbjct: 236 LIGAAFVTERLGLAVQAYSHAQRCLDLTLDWVRQRETFGEPLIKRQAVQNTVTEMRRRIE 295

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A   S  +A+ +  A      AA A ++  A   K    +    V  EA++  GG GY+
Sbjct: 296 VARVYSRHVADLYTAALESGGPAAAAELVPQACFAKNTAVECGEWVANEAVQLFGGHGYM 355

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  ++RHYR+     + +G G   +L  L
Sbjct: 356 SEYEVSRHYRD--VRILGIGGGTTQILTTL 383


>gi|116254744|ref|YP_770580.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259392|emb|CAK10527.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 375

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 30/263 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254
           G  LTE + G+D + + ++ ++  D  Y L G K F++S  + D  I+ A  +  VG   
Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-YYVLDGSKQFITSGKNGDVIIVFAVTDPDVGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G    R++ K+G  S+ T ++ F++         G       ++
Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLGAEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +++   +   +AD+A+ 
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERIAFGKPIVEHQAVAFRLADMAVR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L F  A+  +       EA+ A++ A        +MA  V ++A++  GG GY+
Sbjct: 290 IEAARQLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 342

Query: 426 EERSIARHYRESPANSILLGSGN 448
            +  + R YR+     I  G+ +
Sbjct: 343 ADYPVERIYRDVRICQIYEGTSD 365


>gi|126432713|ref|YP_001068404.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126232513|gb|ABN95913.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 588

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 41/304 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM     +  + L+E + G+ +A IT++ +   DG Y L G K ++S    +       +
Sbjct: 152 PMLAGRFSGTMALSETQAGSSLADITTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNL 211

Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292
           +LA++ G       +  F+VP+ L  EDGS    N +    L +K+G R      L F  
Sbjct: 212 VLAKIPGGPPGTKGISLFVVPKYLVAEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGE 271

Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
                       G+L+G+ +     +  M     L   + +V+       +++ YAR R 
Sbjct: 272 GVFNPGGEPGAVGYLVGEPHRGITYMFRMMNEARLGVGMGAVALGYTGYLKSVKYARERP 331

Query: 344 VSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
               +    P            +KR +      +  A AL+   A   D   ++      
Sbjct: 332 QGRPVTAKDPATPQVPIIEHADVKRMLLAQKSYVEGALALALYCARLVDLGDNQD----L 387

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             I+ P+ K W  +      + A++  GG GY  E  + +HYR++  N I  G+     +
Sbjct: 388 LDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSV 447

Query: 453 DVLN 456
           D+L 
Sbjct: 448 DLLG 451


>gi|89902828|ref|YP_525299.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347565|gb|ABD71768.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 398

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ S+  K++ G Y LSG K W  +
Sbjct: 114 FGTEAQKQKYLPKLATGEWIGCFGLTEPDHGSDPGSMASRAHKVAGG-YKLSGAKMWISN 172

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+     G+VG   +   + D    GL    +  K+G R++ T E+    
Sbjct: 173 SPIADVFVVWAKEVSESGKVGP--IRGFVLDKGMAGLSAPAIHGKVGLRASITGEIVMDG 230

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         LDSA   ++   +  AE     A  Y   R   
Sbjct: 231 VFCPEENAFPEVRGLKGP------FTCLDSARYGIAWGTLGAAEDCWLRAHRYVMDRKQF 284

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA       RL    DE  +  E       +  I K   C
Sbjct: 285 GRPLAANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGTASVE-------ITSILKRNSC 337

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 338 GKALDIARLARDMMGGNGISDEFGVARH 365


>gi|126461936|ref|YP_001043050.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126103600|gb|ABN76278.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 39/298 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P     + PK+ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  +G Y L+G K W  + P +D  ++ A+ +   G   +   L + S  G       +
Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
           K+G R + T EL F N    F  +LG         + +++L+  LD   + +SG     M
Sbjct: 206 KVGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D  +    
Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +AA   +       +  + A     +A++ +GG+GY+ +  ++R +R++    I  G+
Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLMEIGAGT 370


>gi|254702633|ref|ZP_05164461.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 326

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G   F++ +P++D F ++A+    V+G  G  
Sbjct: 66  LTEPDAGSDAASLKTTAVRDGD-FYILNGTNRFITNAPIADIFTVMARTAADVKGADGIS 124

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 125 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 178

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA
Sbjct: 179 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 238

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +
Sbjct: 239 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 291

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 292 IERFYRD 298


>gi|126666971|ref|ZP_01737947.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628687|gb|EAZ99308.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 598

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 40/316 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+  I ++ +   DG + ++G K F++    D       ++LA++ G   
Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNDDGSFAVTGTKIFITWGEHDMAENIVHLVLAKLPGAPK 223

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ L  +DGS    N +    ++ K+G + +AT  + +    G+L+G+ N
Sbjct: 224 GPKGISMFLVPKFLVKDDGSLGDRNPVTCGSIEKKMGIKGSATCVMNYDAARGWLVGEEN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350
                +  M     L   +  +     SL  A  YA+ R               +  IL+
Sbjct: 284 KGLNAMFTMMNYERLGVGVQGLGAAEASLQSAREYAKDRIQSRAPSGAQQPEKAADPILV 343

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA--------PITKY 402
             P ++R +  +   +    A S  +A   D AK   +     RI A        P+ K 
Sbjct: 344 -HPDVRRMLLTMKGYVEGGRAFSTYVAQWLDIAKYADDSEQERRIHAEGMVSLLTPVAKA 402

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +       V     + +GG G+I E    +  R+     I  G+     LD++     G+
Sbjct: 403 FLTDRGLDVCIIGQQVLGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGS 462

Query: 463 NLFEQLFSTLEQDLGS 478
               +L+    QD+ +
Sbjct: 463 Q--GKLYELFAQDVAA 476


>gi|118377002|ref|XP_001021683.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89303449|gb|EAS01437.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 405

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 44/361 (12%)

Query: 118 SIWD-RSFEPV-VRKQAHKIRAARLY------------LMAQLEAGHLMSPSVTSASMVA 163
           S WD +S  P+ V K+A K+  A +Y            + A L    L +  V+++S ++
Sbjct: 58  SEWDQKSQSPIEVYKEAGKLGFACIYSSPDHGGSGMDRVSASLVFEALATACVSTSSYLS 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKIS 222
           ++        W    +  E       P   T        LTE   G+D A + +  +K  
Sbjct: 118 ILNM----NHWIIDTYGNEKQKAEWLPQLSTVEKFSSYCLTEPGSGSDAANMKTFAKK-D 172

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G Y ++G K F+S+   SD ++++ +  E    C LVP         GL + + + K+G
Sbjct: 173 GGDYVINGSKCFISNAGFSDLYVVMCKTGENERSCILVP-----SDAKGLSFGKPEVKMG 227

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LAE 334
             ++ T  + F N     +   N+ +      KI +  LD   ++++   +      LA+
Sbjct: 228 WHASPTASITFDNV---RVPQSNLISTEGNGFKIAMTALDGGRVNIASTSLGSAAQCLAK 284

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA 393
              Y  +R   G  +      +  IA++A D+ A+  L    A   D    +++  A+ A
Sbjct: 285 TKEYVGQRKQFGKSIDSFQNTQFRIAEMATDLIASRLLVREAAKKIDLNHPNKTLYASMA 344

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +I A    Y        ++ + ++  GG GYI E +I RH R+   N IL G+   M L 
Sbjct: 345 KIQATEKCY-------NIVDQCLQLHGGYGYISEYNIERHLRDLRVNRILEGTNEIMRLI 397

Query: 454 V 454
           V
Sbjct: 398 V 398


>gi|24373462|ref|NP_717505.1| isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1]
 gi|24347753|gb|AAN54949.1|AE015633_1 isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1]
          Length = 389

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|317406170|gb|EFV86424.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 375

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 30/282 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+   +   G  LTE + G+D +++ ++  +  D  Y L+G K F++S  +   +++  V
Sbjct: 111 PLATGAAIGGFALTEPQAGSDASSLRTRAVRDGDH-YVLNGAKQFITSGRTGQLVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
                G+ G   F+VP         G    R+++K+G   + T ++ F +      + LG
Sbjct: 170 TDPQAGKRGISAFIVPT-----DTPGYQVVRVEDKLGQHLSDTCQIAFEDMRIPAAWRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  SV   R +   A  YAR R   G  +++   + 
Sbjct: 225 EEGEGYKIALSNLEGGRIGI----ASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVS 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  +    A   +  +    EA+ A++ A        +MA  V + A+
Sbjct: 281 FRLADMATQIHAARQMVLHAAALREAGRPALTEASMAKLFA-------SEMAEKVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 334 QTLGGYGYLADFPVERIYRDVRVCQIYEGTSDIQRLVIARAL 375


>gi|167745829|ref|ZP_02417956.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662]
 gi|167654693|gb|EDR98822.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662]
          Length = 632

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE+  G+D A  T     +    Y L+G K F++ +  +D +++ A     +G   +
Sbjct: 123 FGLTEQNAGSD-AGGTETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +    +K+G RS++T EL F++     +   N+     E  KI +  
Sbjct: 182 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMST 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+A  +  A  L
Sbjct: 239 LDGGRIGIAAQALGIAQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A+  +  +    E+A A       K +   +   V+ +A++  GG+GY++   + R
Sbjct: 299 VYSAADLKENHEPYGLESAMA-------KQYTSDICLEVVNDALQIFGGTGYLKGMDVER 351

Query: 433 HYRESPANSILLGS 446
            YR++   +I  G+
Sbjct: 352 AYRDAKICTIYEGT 365


>gi|262369782|ref|ZP_06063110.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315850|gb|EEY96889.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 378

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE + G+D  A+  +  +  +  + L+G K F+++     ++  F +  +  G+ G  C
Sbjct: 123 LTEPQAGSDAGALECKAVREGEE-WVLNGTKQFITTGKHAQVALVFAVTDKGAGKKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           FLVP   E     G    R++ K+G   + T  +   N       LLG       ++   
Sbjct: 182 FLVPTDTE-----GYIVSRIEEKMGQHCSDTATIVLENCRIPADHLLGAEGEGYKIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  SV   R +L  A+ YA  R   G  ++    +   +AD+A  I A
Sbjct: 237 LESGRIGI----AAQSVGMARAALDAAVEYANDRKAFGVEIVQHQAVAFRLADMATQIEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L F  A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 293 ARQLIFHAAALKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 346 PVERIYRDVRVSQIYEGASD 365


>gi|169797090|ref|YP_001714883.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156503|ref|YP_002318164.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215484553|ref|YP_002326788.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
           AB307-0294]
 gi|260555617|ref|ZP_05827837.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|301594728|ref|ZP_07239736.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332856328|ref|ZP_08436195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332867824|ref|ZP_08437862.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169150017|emb|CAM87911.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213055663|gb|ACJ40565.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988121|gb|ACJ58420.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
           AB307-0294]
 gi|260410528|gb|EEX03826.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|332727099|gb|EGJ58570.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733724|gb|EGJ64879.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 406

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 180

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373


>gi|319764945|ref|YP_004128882.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317119506|gb|ADV01995.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 382

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 17/250 (6%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVP 259
           TE + G+D++ I ++  K+  G Y ++G K W  +S ++D  ++ A+ E  G+ G  L  
Sbjct: 124 TEAQSGSDVSGIRTRAVKVQGG-YRINGAKIWCTNSDLADFVLVAAKYEQGGKDGISLF- 181

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            ++E G+P G    + ++KIG R   +  L   + F   + + N+  G  + +       
Sbjct: 182 -IVERGTP-GFTVGKKEDKIGARGVPSCPLFLDDVF---VPEHNLVGGGFKAVMEAFNAS 236

Query: 320 SAIMSVSGMRVSLAEAIH---YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             ++   G+ ++     H   + + R   G  + D   ++  +AD+A+   AA  L +R 
Sbjct: 237 RPLIGARGVGLAQGAIDHASAFIKERRAFGQQICDFQGVRWMLADMAIQTEAARHLVYRA 296

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  D+A   +E A     +A + K +    A  V  +A++  G +G   E  I R++R+
Sbjct: 297 ASLVDQAAPSAELAP----IAAMAKCFASDTAMKVATDAVQLFGAAGVSSEYPINRYFRD 352

Query: 437 SPANSILLGS 446
           +    I+ G+
Sbjct: 353 AKVLQIIEGT 362


>gi|293605089|ref|ZP_06687481.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816492|gb|EFF75581.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 384

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 32/325 (9%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PS T+   +  M T  V + W        + P   +  +  S      LTE   G+D 
Sbjct: 79  VDPSTTAFLTIHNMATWMVGQ-WGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266
           A++T++ Q+  D  Y L+G K F+S    +D  +++A+  G     +  F VP       
Sbjct: 134 ASLTTRAQRQGDD-YVLNGAKAFISGAGDTDLLVVMARTGGEGAGGISAFAVP-----AD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+ Y R + K+G  S +T  + F N     +  L V     E  KI +  LD   +++
Sbjct: 188 SAGISYGRKEEKMGWNSQSTRPITFENVRVPAVNLLGVEG---EGFKIAMKGLDGGRINI 244

Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V  A+    A RR++         L +   ++  +AD+A  + A+  +    A   
Sbjct: 245 GTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVASRQMVRLAACKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D        A  A     + K +   M   +  +A +  GG GY+++  + R  R++  +
Sbjct: 305 DAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLKDYPLERLVRDTRVH 358

Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464
            IL G+   M V+    LLEKG ++
Sbjct: 359 QILEGTNEIMRVIIARQLLEKGADI 383


>gi|254510438|ref|ZP_05122505.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221534149|gb|EEE37137.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 385

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 31/288 (10%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
            + W PK+ S E               IG L +TE   G+D+ A+ +  +K  +  Y L+
Sbjct: 111 KQKWLPKLASGEM--------------IGALAMTEPGTGSDVQAVKTTAEKDGNS-YRLN 155

Query: 230 GHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATV 287
           G K F+++  S D  I+ A+ +  +G   V  + +E     G    R   K+G + N T 
Sbjct: 156 GSKIFITNGQSADLVIVAAKTDKSLGAKGVSLIAVETDGAEGFRRGRNLKKLGMKGNDTA 215

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRR 342
           EL F +       LLG      G  + M+ L +  L   IM++  +  ++AE + Y + R
Sbjct: 216 ELFFEDVKVPMTNLLGS-EEGQGFYQLMRQLPWERLTIGIMALGAIDFAIAETVKYVQER 274

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  ++D         +    +A     +  L +  ++   + E        A + KY
Sbjct: 275 KAFGQRVMD-------FQNTRFKLAECKTKAEVLRSFVNDCIGKLEAGELDAATASMVKY 327

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W  ++   ++ E ++  GG G++ E  IAR Y ++    I  G+   M
Sbjct: 328 WGSEVQNEIMHECLQLFGGYGFMMEYPIARLYADARVQMIYGGTNEVM 375


>gi|326508384|dbj|BAJ99459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 43/294 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE + G+D+  + ++ +   DG Y +SG K F+S     M+D  +  +LA++       
Sbjct: 182 LTEPQCGSDLGQVKTKAEPNGDGTYKISGTKIFISCGDHDMADNILHCVLARLPNAPAGT 241

Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F VP  ++  DGS    N +   R+++K+G   ++T ++ F    G L+G  N  
Sbjct: 242 KGISLFAVPKRKVNADGSLGDFNNVGIDRIEDKMGCHGSSTCQINFEEAEGVLIGSENKG 301

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQP 353
              +        + +A+  ++   +S  +A+ YA+ R     +SG          +I+ P
Sbjct: 302 LPHMFTFINTSRVGTAVQGMAAAELSYQKALAYAKERFSMRALSGTKNPEKAADFIINHP 361

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITK 401
                 + ++AIA+    +    A    LA+   EA+ + +    A I      M PI K
Sbjct: 362 GVRKLLMFQKAIAEGGRSMIYECAF---LADEMFEAEVKGDTKKVAEIDDRLGFMTPILK 418

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  +M        ++  GG GY+++  + +  R+    S+  G+     LD+L
Sbjct: 419 GYLTEMGLEAANAGIQVWGGHGYVKDNGMEQIVRDVRIASVWEGTTQIQGLDLL 472


>gi|239831285|ref|ZP_04679614.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823552|gb|EEQ95120.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 592

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L   DGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNADGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     I     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALSYAKERKQGRAIGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P + R      A+  IA  I  + A +  ++++ D A  +  S+ A    +
Sbjct: 339 QGMTPIIEHPDVSRMLLTMKALTQIARSITYSCAHAIDMSHATDGADQQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVASLGVQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|237740005|ref|ZP_04570486.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31]
 gi|229422022|gb|EEO37069.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31]
          Length = 381

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 39/292 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++   +  +++ A  +   G   +   ++E G+P G    + + K+G R +AT EL
Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEAGTP-GFSIGKKEMKLGIRGSATCEL 214

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334
            F N       LLGD        +  KI      A+M++ G R+ +A            E
Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALEE 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI+YA+ R   G  L      +  IA++ + + AA  L ++ A         S +AA A+
Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|320450391|ref|YP_004202487.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150560|gb|ADW21938.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 577

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 40/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  A  ++    +DG  Y L+G K W  ++  ++ F + A+V+G     FLV
Sbjct: 148 LTEPGSGSDALAAKTRATLSADGKHYVLNGVKQWISNAGFANLFTVFAKVDGEHFTAFLV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        GL +   + K+G ++++T ++        +L D+ V   PVE++   I  
Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               +V G + +L  +  YA+ RH  G  +    +++  + ++A 
Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAKYAKERHQFGRPIGSFGLIQHKLGEMAT 311

Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417
            I AA +  +R     DEA    +  EA  A I      A I K    ++   V+ E ++
Sbjct: 312 RIYAAESAVYRTVGLIDEALQGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY +E  I R YR++  N I  G+
Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400


>gi|310791087|gb|EFQ26616.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 424

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 30/278 (10%)

Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           N +P QK          TSV   L ++E   G+D+ ++      + DG + L+G K W  
Sbjct: 139 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRMTATAV-DGGHVLNGSKMWIT 196

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + P +D  ++ A+ E   G   V   + +    G    R  +K+G R + T EL F + F
Sbjct: 197 NGPDADVIVVYAKTEPDKGSKGVTAFIVETKAKGFSCARKLDKMGMRGSNTGELNFDSVF 256

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349
                +LG +N   G V  +   + L+  ++S      M+ +L  A+ +  +R   G  +
Sbjct: 257 VPKENVLGKVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQFGIPI 313

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMA 408
                ++  +AD+   + A+ A ++  A + DE    R+++ A A +       +  + A
Sbjct: 314 AQNQFIQGKLADMYTKLQASRAYTYSTAKAVDEEGLIRTQDCAGAIL-------YAAERA 366

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                ++++ +GG GY+EE   +R  R++    I  G+
Sbjct: 367 TECTLDSIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 404


>gi|242778135|ref|XP_002479178.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722797|gb|EED22215.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 438

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 25/269 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K +DG Y ++G K W  +S  +  FI+ A ++   G   +  
Sbjct: 179 LSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 237

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
            + +    G    + + K+G R+++T       VE+  +N  G       ++ G + + +
Sbjct: 238 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVEIPKANLLGEEGKGYKIAIGILNEGR 297

Query: 314 ILIYLDSAIMSVSGMRVSLAE--AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I I        ++G+ +   E  A +    R   G ++ +   M+  IA    +IAAA A
Sbjct: 298 IGI-----AAQMTGLAIGAWENAAGYVWNDRKQFGQLIGNFQGMQHQIAQAYTEIAAARA 352

Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L +  A        R +EA    +M A + K +  ++A  V   A+E +GG G++ E   
Sbjct: 353 LVYNAA--------RKKEAGQNFVMDAAMAKLYASQVAGRVAGSAVEWMGGMGFVREGIA 404

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLE 459
            + +R+S   +I  G+ N  +  +   L+
Sbjct: 405 EKMFRDSKIGAIYEGTSNIQLTTIAKQLQ 433


>gi|209520153|ref|ZP_03268926.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209499417|gb|EDZ99499.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 601

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 36/293 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE + G+ ++ +T+     +DG + + G+K F+S     +S+  +  +LA++ G   
Sbjct: 163 MALTEPQAGSSLSDLTTTATPNADGTWSIRGNKIFISGGDHELSENIVHLVLARIPGGPP 222

Query: 253 ----VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F VP  R+ +DGS    N +    L +K+G R   +  L F       G L+G
Sbjct: 223 GVKGISLFTVPKFRVNDDGSLGERNDVALAGLIHKMGWRGTTSTMLSFGEHGECVGELIG 282

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349
           +    L      + + +I + L + ++   G   SL  A    + RH S          L
Sbjct: 283 EPHHGLAYMFHMMNEARIGVGLGAVMLGYRGYLASLDYARERPQGRHPSSKNPLDPQLPL 342

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403
           I+   ++R +      +  A AL    A   DE  +      R+E      ++ PI K W
Sbjct: 343 IEHADVRRMLLAQKAYVEGAYALCLYAARLVDEQNTGESDDARAEAGLLLDLLTPIVKSW 402

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +      + A++  GG GY  E  + + YR++  N I  G+     +D+L 
Sbjct: 403 PSQWCLEANSLAIQIHGGYGYTREYPVEQFYRDNRLNMIHEGTHGIQAIDLLG 455


>gi|307293387|ref|ZP_07573233.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881453|gb|EFN12669.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 381

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 39/290 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++  + +K  D  Y
Sbjct: 106 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEKRGD-RY 151

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++  +D  ++ A+  EG  G  +   L+E G       Q++ +K+G R +
Sbjct: 152 VLNGTKFWITNATYADTLVVYAKTGEGARG--ITAFLIEKGFKGFSIGQKI-DKVGMRGS 208

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----I 336
            T EL F +       ++G LN   G      ++  LD     +SG+++ + +A     +
Sbjct: 209 PTAELVFDDCEVPEENIMGPLNGGVGV-----LMSGLDYERAVLSGIQLGIMQACMDVVL 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  +    +M+  +AD+ + + +A A  + +A + D  K+   +AA A ++
Sbjct: 264 PYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACDRGKTTRFDAAGAILL 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        + A  V  EA++ +GG+GY ++  + R+ R++    I  G+
Sbjct: 324 A-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLDIGAGT 366


>gi|296168603|ref|ZP_06850407.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896666|gb|EFG76305.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 52/313 (16%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    K+W P++   +             V     LTE   G+D +A++++ 
Sbjct: 93  AWMIDTFGTAEQRKEWVPRLAGMD-------------VIASYCLTEPGAGSDASALSTRA 139

Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +   G    Y L+G K F+S +  SDA++++A+  G     +   ++E GS  GL +  
Sbjct: 140 VREGPGKNADYVLTGVKQFISGAGASDAYVVMARTGGDGPRGISAFVVEKGSA-GLSFGA 198

Query: 275 LKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIY 317
            + K+G  +  T ++                      FG  +  LN              
Sbjct: 199 PEEKMGWHAQPTAQVILDGVRVPAEAMLGGADGEGAGFGIAMNGLNGGR----------- 247

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  S+ G + +  +A  Y R R   G  L+D+P ++  +AD+A  +  +  + +R A
Sbjct: 248 LNIAACSLGGAQSAFDKAGAYVREREAFGKPLLDEPTVRFTLADMATGLETSRMMLWRAA 307

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++ D       E      +  + K +       V  +A++  GG GY+ E  + +  R+ 
Sbjct: 308 DALDNDDPDKVE------LCAMGKRYVTDTCFDVADKALQLHGGYGYLREYGLEKIVRDL 361

Query: 438 PANSILLGSGNAM 450
             + IL G+   M
Sbjct: 362 RVHRILEGTNEIM 374


>gi|326318789|ref|YP_004236461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375625|gb|ADX47894.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 601

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 74/407 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255
           D+  + ++ + ++   +G Y ++G+K F+S+   D       ++LA++    +G  G   
Sbjct: 175 DLGLLRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISL 234

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+   +     G  N +    L++K+G   NAT ++      G L+G       P +
Sbjct: 235 FVVPKYQVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQ------PHK 288

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG---------ILID 351
            ++ + + +++A + V    + L E     A+ YA+ R     +SG          I++ 
Sbjct: 289 GLQAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVH 348

Query: 352 QPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             V K     +A A+ A  +     L    A+S  + K R +      ++ PI K +   
Sbjct: 349 PDVRKMLLTAKAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463
                    M+  GG G+I+E  + +  R++  N I  G+     LD+L    L   G  
Sbjct: 409 NGHIATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 468

Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503
           L  F +L   L ++ G + K       I  L D ++    + G   F
Sbjct: 469 LKKFGKLVGKLVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGF 515


>gi|163856823|ref|YP_001631121.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163260551|emb|CAP42853.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 32/325 (9%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PS T+   +  M T  V + W        + P   +  +  S      LTE   G+D 
Sbjct: 79  VDPSTTAFLTIHNMATWMVGQ-WGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266
            +++++ Q+  D  Y L+G K F+S    +D  +++A+  G     V  F VP       
Sbjct: 134 GSLSTRAQRDGD-HYVLNGAKAFISGGGDTDLLVVMARTGGEGPGGVSAFAVP-----AD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+ Y R + K+G  S +T  + F N     +   N+     E  KI +  LD   +++
Sbjct: 188 SAGISYGRKEEKMGWNSQSTRPITFENV---RVPAANMLGSEGEGFKIAMKGLDGGRINI 244

Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V   +    A RR++      G  L +   ++  +AD+A  + AA  +  RLA   
Sbjct: 245 GTCSVGAGQGALDAARRYMDERRQFGRRLAEFQALQFKLADMATHLVAARQM-VRLAACK 303

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +A S       A     + K +   M   V  +A +  GG GY+ +  + R  R++  +
Sbjct: 304 LDAGSPD-----AGTYCAMAKRFATDMGFQVCLDAQQIHGGYGYLRDYPLERLVRDTRVH 358

Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464
            IL G+   M V+    LLEKG ++
Sbjct: 359 QILEGTNEIMRVIVARQLLEKGADI 383


>gi|220922160|ref|YP_002497461.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219946766|gb|ACL57158.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 380

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 20/261 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y L+G K F+S   + D ++++A+  G  G   +  
Sbjct: 125 LTEPGSGSDAAALRTTARREGDD-YVLNGTKQFISGAGAVDLYVVMART-GEAGPRGIST 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           L+   +  GL +   + K+G  +  T ++ F       +N  G       ++   ++  +
Sbjct: 183 LVVPATTPGLSFGPNERKMGWNAQPTRQVIFGECRVPVANRLGEEGTGFRIAMAGLDGGR 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I       S+ G + +L +A+ Y R R   G  L +   ++  +AD+A ++ AA  + 
Sbjct: 243 LNI----GACSLGGAQSALDKALAYTRERRAFGKRLDEFQALQFRLADMATELEAARLMI 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A+S D    R +  A  R  A + K +   +   V  EA++  GG GY+ E  + + 
Sbjct: 299 YAAASSLD----RGDADATQR--AAMAKRFATDVGFKVANEALQLHGGYGYLSEYGVEKI 352

Query: 434 YRESPANSILLGSGNAMVLDV 454
            R+   + IL G+   M L V
Sbjct: 353 VRDLRVHQILEGTNEIMRLIV 373


>gi|148254990|ref|YP_001239575.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146407163|gb|ABQ35669.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 381

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 39/369 (10%)

Query: 116 HCSIWD--RSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165
           H   WD  + F   V +QA  +    +Y+        + +L+A  +     T    V+  
Sbjct: 27  HALRWDEEKHFPVDVMRQAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATGCPTVSAF 86

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            +      W    F  E       P +    +     LTE   G+D AA+ ++  +  D 
Sbjct: 87  ISIHNMASWMIDTFGTEAQRQAYLPKLCAMDLIASYCLTEPGAGSDAAALRTRAVRDGDD 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            Y L+G K F+S   +   ++     G  G   +  L+ D    G+ +   + K+G  + 
Sbjct: 147 -YVLNGQKQFISGAGATDILVAMVRTGADGPGGISTLVIDAKTPGVSFGANERKMGWNAQ 205

Query: 285 ATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            T  + F N              GF +    +  G          L+ A  S+ G + +L
Sbjct: 206 PTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGG---------RLNIAACSLGGAQSAL 256

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            + + Y + R   G  L +   ++  IAD+A+++ AA    +R A + D       + A 
Sbjct: 257 DKTLAYTKERKAFGKRLDEFQALQFRIADMAIELEAARTFVWRAAAALD------RKDAD 310

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + IL G+   M L
Sbjct: 311 ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIMRL 370

Query: 453 DVLNLLEKG 461
            V   L +G
Sbjct: 371 IVSRKLIEG 379


>gi|256822431|ref|YP_003146394.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795970|gb|ACV26626.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 392

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A++ ++ +K+ DG Y L+G+K W  +SP++D FI+  
Sbjct: 125 PKLATGEWVGCFGLTEPDSGSDPASMKTRAKKV-DGGYRLTGNKMWITNSPIADVFIVWG 183

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  EG +  F++ + +E     GL   +++ K   R++ T E+   N F        ++ 
Sbjct: 184 KDDEGEIRGFILEKGME-----GLSAPKIEGKFALRASITGEIVMDNVFVPEENKFPEIK 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRA 358
              GP   + +  Y       +S   +  AE   +A R++       ++P     + ++ 
Sbjct: 239 GLKGPFGCLNVARY------GISWGALGAAEFCWHAARQYGLDRKQFNKPLASMQLFQKK 292

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +I+     + R+    DE + + E       M  + K   C  A  +   A + 
Sbjct: 293 LADMQTEISLGLQGALRVGRLIDEKRFKPE-------MISLVKRNSCGKALDIARMARDM 345

Query: 419 IGGSGYIEERSIARH 433
            GG+G  +E  + RH
Sbjct: 346 HGGNGIADEFHVIRH 360


>gi|149378464|ref|ZP_01896153.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357255|gb|EDM45788.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 386

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 161/388 (41%), Gaps = 60/388 (15%)

Query: 102 AWHALLRRSIHDGL------HCSIWDRSFEPVVRKQAHK--------IRAARLY------ 141
           A H  LR+++ D +      HC  W+ + E  +     K        I+    Y      
Sbjct: 5   AEHEALRKTVRDFVEKEINPHCDEWEEAGEFPIHDIFKKLGNLGLLGIQKPEEYGGMGLD 64

Query: 142 ----LMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
               L+A  E G      V  A  V   M TP + +       S E   T  AP     +
Sbjct: 65  YSYNLVAAEELGTAHCGGVPLAIGVQTDMCTPAISR-----FGSDELKRTFLAPAIAGDM 119

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---- 251
              +G++E   G+D+A + +  ++  D  Y ++G K W  +SP +D   +LA        
Sbjct: 120 VGCIGVSEVAAGSDVAGMKTTAKQDGDD-YVINGSKMWITNSPRADFICLLANTSDDKPH 178

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
                 +VP      +  G+ +    NK+G RS+ T ++ F +      + +G    + G
Sbjct: 179 KNKSLIVVPM-----NTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIG----AEG 229

Query: 308 PVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               M++L + +     A   +  + + +++ I Y R R   G  LI+  V+   +A++ 
Sbjct: 230 TGFMMQMLQFQEERMWGAANVIKALELCISKTIEYCRERKTFGQPLINNQVIHFRLAELQ 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ A  AL+++      E K  ++ A+ A++ A        ++   V    ++  GG+G
Sbjct: 290 TEVEALRALTYQACELHVEGKDVTKLASMAKLKAG-------RLGREVTDSCLQYWGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y+ E  ++R +R+    SI  G+   M+
Sbjct: 343 YMWENPLSRAFRDVRLVSIGGGADEIML 370


>gi|86136638|ref|ZP_01055217.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85827512|gb|EAQ47708.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 386

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 30/287 (10%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  E       P+ ++  AI    LTE R G+D+A  T     +    Y L+G K 
Sbjct: 99  AISLFGTEAQQAEWLPLTRSGKAISAFALTEPRSGSDVANSTMTA-TLDGEDYVLNGEKT 157

Query: 233 WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           W  +  ++D + + A+  EG     +  F+VP     G P      R +  I     AT 
Sbjct: 158 WISNGGIADVYTLFARTGEGPGAKGLSAFIVPA----GLPGFEVVAR-QQVIAPHPLAT- 211

Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRR 342
            L+FS+       LLG      G    M +L    S + + + G  R +L EA+H    R
Sbjct: 212 -LQFSDCRIPKSALLG--QPGGGFKIAMSVLDVFRSTVAAAALGFARRALDEALHRVSTR 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITK 401
            V G  L D  +++  IAD+ALD+ AA  L +R A + D    R + EAA A       K
Sbjct: 269 QVQGAPLFDLQMVQGHIADMALDVDAAALLVYRAAWAKDSGAMRVTREAAMA-------K 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +    A  VI +A++  GG G    + +   YR+  A  I  G+ +
Sbjct: 322 LFSTDQAQQVIDKAVQLHGGDGVRHGQKVEELYRDIRALRIYEGASD 368


>gi|291004058|ref|ZP_06562031.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 389

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 26/269 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M    V   + LTE  GG+D+ A+ +   + +DG Y ++G K W  +S  S    ++ + 
Sbjct: 116 MATGEVRATMALTEPGGGSDLQAMRTVASRDADG-YVVNGSKTWITNSRRSQLIALMCKT 174

Query: 250 EGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
           + R      G  ++  L+E G   GL   R   K+G +   + EL F +   +   +LG 
Sbjct: 175 DPRAEPAHKGISIL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFDDYRASADAVLGG 230

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           +    G  + MK L    L  A  ++   R +L +++ YA+ R   G  +     +   +
Sbjct: 231 VE-GAGFAQMMKGLETGRLQVAARALGVARAALEDSLAYAQERESFGKPIWQHQSIGNYL 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A   +AA  L+   A  +D  +    EA  A++ A  T       A  +  +A+   
Sbjct: 290 ADMATSFSAARQLTLHAAREYDAGRRVDMEAGMAKLFASET-------AMRIALDAVRIH 342

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448
           GG GY  E  + R++R++P   +++G G 
Sbjct: 343 GGYGYSTEFDVERYFRDAPL--MIVGEGT 369


>gi|305664397|ref|YP_003860684.1| AcdA [Maribacter sp. HTCC2170]
 gi|88708414|gb|EAR00650.1| AcdA [Maribacter sp. HTCC2170]
          Length = 384

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  GLTE   G+D   +++   K  D  + L+G K
Sbjct: 115 WIPKLASGEW--------------IGAWGLTEHNTGSDAGGMSTTAVKDGDD-WVLNGAK 159

Query: 233 WFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            F++  +S    ++    G  G    +    +E G+P G    + ++K+G R++ T EL 
Sbjct: 160 NFITHGISGDIAVVITRTGEKGDSHGMTAFAIEKGTP-GFSSGKKEDKLGMRASETAELI 218

Query: 291 FSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F+N     + D N    V  G ++ MK+L   D   +S+  + + +++  + A  ++   
Sbjct: 219 FNNC---RVSDKNRLGKVGEGFIQSMKVL---DGGRISIGALSLGVSKGAYEAALKYSKE 272

Query: 347 GILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
            I   +P+     +   +AD+  +I A+  L  + A   +E +  ++  A  ++ A    
Sbjct: 273 RIQFGKPISQFQGISFKLADMVTEIEASELLLHKAAFLKNEGRPMTKLGAMCKMYASEV- 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             C K+A     EA++  GG GY ++  + + YR+S   +I  G G   +  V+
Sbjct: 332 --CVKVAN----EAVQIHGGYGYTKDFPVEKFYRDSKLCTI--GEGTTEIQKVV 377


>gi|110633080|ref|YP_673288.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110284064|gb|ABG62123.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 591

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/421 (20%), Positives = 171/421 (40%), Gaps = 65/421 (15%)

Query: 102 AWHALLRRSIHDGLHC----SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            W AL RR    G +     + W     P +      +  A L +         + P++T
Sbjct: 74  GWPALYRRWCEGGWNALAAPTRWGGQGLPTM------LSVAALEMWNSASMAFALGPTLT 127

Query: 158 SASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    T  + + +  K+ S E+  T             + LTE + G+D+ A+ 
Sbjct: 128 MGAVEALERHATDALRQTYMEKLVSGEWMAT-------------MNLTEPQAGSDLGALR 174

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-- 262
           ++ ++  DG Y + G K F++    D       ++LA++         +  FLVP+ L  
Sbjct: 175 TRAERAGDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVG 234

Query: 263 EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVED 311
           EDGS    N +    +++K+G  ++ T  + + +          G+L+G+ N     +  
Sbjct: 235 EDGSLGPRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFT 294

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SG---GILIDQPVMKRAIADI 362
           M     L   +  V+    +  +A+ YA+ R        SG     +   P +KR +  +
Sbjct: 295 MMNNARLAVGMEGVAVAEAAYQKALAYAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSM 354

Query: 363 ALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                 + A+++  A++ D     E + R+     A ++ P+ K +         +  ++
Sbjct: 355 KSLAEISRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAFATDGGVEAASLGIQ 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475
             GG G+IEE   A +YR+     I  G+     +D++   L + G +      S L +D
Sbjct: 415 VHGGMGFIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRD 474

Query: 476 L 476
           +
Sbjct: 475 V 475


>gi|323456710|gb|EGB12576.1| hypothetical protein AURANDRAFT_58548 [Aureococcus anophagefferens]
          Length = 373

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++ ++ +DG + L+G K W  ++  +  F++ A  +  +G     C
Sbjct: 114 LSEPGSGSDAFALATRAERKADGSWVLNGEKAWITNAEHAGVFLVFANADPSLGYKGITC 173

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F V     DG   GL   R ++K+G R+++T  +   +       +LGD  V  G    +
Sbjct: 174 FAV-----DGGAPGLTVGRKEDKLGIRASSTCPVVLEDVVVGPEAVLGD--VGAGYKYAI 226

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            I   L+   + +    V LA+      + Y   R   G  + D   M+   A++A +IA
Sbjct: 227 GI---LNEGRIGIGAQMVGLAQGCFDATMPYLFERSQFGSAVGDFQGMQMQYAEVATEIA 283

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A   ++      +AA A++ A        ++A    ++ +E +GG G++++
Sbjct: 284 AARLLVYNAARKKEQGLPFIADAAMAKLKAS-------RVAELSASKCIEWMGGVGFMKD 336

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454
               + +R+     I  G+ N  +L +
Sbjct: 337 YPAEKFFRDCKVGQIYEGTSNIQLLTI 363


>gi|195496409|ref|XP_002095682.1| GE22545 [Drosophila yakuba]
 gi|195496430|ref|XP_002095690.1| GE22549 [Drosophila yakuba]
 gi|194181783|gb|EDW95394.1| GE22545 [Drosophila yakuba]
 gi|194181791|gb|EDW95402.1| GE22549 [Drosophila yakuba]
          Length = 414

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T +L F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       KY+  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAAIKCVDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|84623396|ref|YP_450768.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577295|ref|YP_001914224.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84367336|dbj|BAE68494.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521747|gb|ACD59692.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 393

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
                   G+ Y R + K+G  S  T  +   N     +   N+     E  K+ +  LD
Sbjct: 191 FAVPADAPGISYGRKEEKMGWNSQPTRGVTLENV---RIPAENLLGKEGEGFKMAMKALD 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388


>gi|78223416|ref|YP_385163.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194671|gb|ABB32438.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 615

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 150/369 (40%), Gaps = 66/369 (17%)

Query: 127 VVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           V++  AH++  AA    M  +   H       +A ++ L  + +    +  K++  E+  
Sbjct: 107 VIKNAAHEMFFAANFPFMCYVNLTH------DAAKLIELFGSEQQKSQYLHKMYGGEWLG 160

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE   G+D+  I  +  + +DG Y L G K F+++  SD    
Sbjct: 161 T-------------MALTEPAAGSDVGNIEFKATRNTDGTYSLVGQKIFITNGDSDVCEN 207

Query: 242 -AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVEL 289
              ++LA++EG       +  F+VP+     DGS    N +    +++K+G +++ T  +
Sbjct: 208 TVHMVLARIEGDPAGTKGLSIFIVPKFKINSDGSLGEANDVKCIGIEHKMGIKASPTTTM 267

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM------RVSLAEAIHYAR 340
            F       G+LLG         + +KI+ ++ +A     GM       VS   A+ YA 
Sbjct: 268 SFGEKGCCTGYLLGKEQ------DGIKIMFHMMNASRLEVGMWGQGTCSVSYMHALRYAL 321

Query: 341 RRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKS 385
            R     I         +I  P ++R +  +   I    A+ +    +       D  + 
Sbjct: 322 ERRQGQSIADPDSGQVPIIHHPDIRRTLLMMKSYIQGMRAMLYYCGYAMDRMAVVDNEEE 381

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + +      ++ P+ K +  +      + A++  GG GY +E  + +  R+S    I  G
Sbjct: 382 KKKLQGIVDLLIPLCKAYPTEKGVEFASHAIQVYGGYGYTQEYPVEQFMRDSKVACIFEG 441

Query: 446 SGNAMVLDV 454
           +     +D+
Sbjct: 442 TTGIQAMDL 450


>gi|317124478|ref|YP_004098590.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315588566|gb|ADU47863.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 381

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 31/296 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V  + T    + W P I S E             + I + +TE  GG+D+AA+ +   + 
Sbjct: 100 VVDLGTDEQKQRWLPGIASGE-------------LIIAIAMTEPSGGSDLAALKTTAVRD 146

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + L+G K F+++   +D  I+ A+ +   G   +   + +   +G    R  +K+G
Sbjct: 147 GDD-WVLNGSKTFITNGYQADLVIVAARTDASKGAKGITLFMVERGMDGFVNGRKLDKVG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
              + T EL F N     + D N       G +  M+ L    + SA+ + +  +  L E
Sbjct: 206 MDESDTAELFFDNV---RVPDENRLGEADLGFIAMMQRLPQERVGSAVANTAHAKAILEE 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I YA+ R   G  +      K  IA++   I    A      +    A S+ E  A   
Sbjct: 263 TIQYAKDRKAFGQSIGTFQHNKFLIAELVTKIEVTEA----YVDDCVLAHSKKELTA--- 315

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I A   K+W  ++   V+   ++  GG G++ E  +AR +R++    I  GS   M
Sbjct: 316 IDAAKAKWWSSQVQNDVLDSCVQLHGGYGFMNEYRVARAWRDARVTKIWAGSNEIM 371


>gi|323344864|ref|ZP_08085088.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269]
 gi|323094134|gb|EFZ36711.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269]
          Length = 575

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 24/289 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRLGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  EA+ YA+ R   G  +I+ P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGQKIINFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFDE--------------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D               A+ R E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDIYKALEDIQRDTKLIAEERDELKKYTRLADAFTPLAKGMNSEYASQAAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L
Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457


>gi|229489982|ref|ZP_04383835.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323083|gb|EEN88851.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 386

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 167/375 (44%), Gaps = 45/375 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G+   I+ R  E V   +  ++ AAR++   +L  
Sbjct: 25  PNAVEWDQTKHFPV--DVLRKAASLGMG-GIYIR--EDVGGSELSRVDAARIF--EELAK 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207
           G    PS+ +   +  M T      W    F  +       P   +   +G   LTE   
Sbjct: 78  G---DPSIAAYISIHNMVT------WMIDQFGNDEQRHKWVPGLCSMDQLGSYCLTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CFLVPRL 261
           G+D A ++++  +  D  Y L+G K F+S +  SD ++++A+  G  G      F+VP+ 
Sbjct: 129 GSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSDVYVVMART-GSAGAKGISAFIVPK- 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
               SP GL +   + K+G  +  T ++ F +       +LG+    +G    MK L   
Sbjct: 186 ---DSP-GLSFGANEIKMGWNAQPTRQVIFEDVRVPAANMLGE--EGSGFRIAMKGLNGG 239

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L+ A  SV G + +L +A+ Y   R   G  LI+   ++  +AD+  ++ AA  L +R 
Sbjct: 240 RLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQLADMRTELEAARTLLWRA 299

Query: 377 ANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A +  D A    E  A A+  A  T +        V  +A++  GG GY+ E  I +  R
Sbjct: 300 AAALEDGAPDVVELCAMAKRFATDTGF-------DVANKALQLHGGYGYLAEYGIEKIVR 352

Query: 436 ESPANSILLGSGNAM 450
           +   + IL GS   M
Sbjct: 353 DLRVHQILEGSNEIM 367


>gi|187476740|ref|YP_784764.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115421326|emb|CAJ47831.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 387

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA++ + +  SDG + L+GHK W  +  ++D + + A+  G  G   +
Sbjct: 127 FALSEPEAGSDVAALSCRAEAQSDG-FVLNGHKTWISNGGLADFYCVFART-GEPGSRGI 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIY 317
              + D    GL  +   + +     A +  +        LLGDLN           +  
Sbjct: 185 SAFIVDADTPGLVIEERIDVMSPHPLALLRFDRCRVPASQLLGDLNQGFKLAMRTLDVFR 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  ++   R +LAE + YA +R + G  L D  + + A  + A +I  +  L++R A
Sbjct: 245 ISVAAAALGFARRALAEGLDYASQRKMFGQTLADFQLTQAAFGEAATEIDQSALLTYRAA 304

Query: 378 NSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              D   +S + E A A++ A        + A  VI   ++  GG G +    + R YR+
Sbjct: 305 WVRDVPQQSSTMETAMAKMAA-------TESAQQVIDRVLQMFGGRGVVRGNVLERLYRD 357


>gi|33598606|ref|NP_886249.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574735|emb|CAE39394.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 382

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 31/259 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255
           LTE   G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A+   E R   + C
Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV    E G+P G+   +   K+G     T ++ F N       LLG     TG    M
Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGGKE-GTGFRTSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  IAD   ++ 
Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA ++    A   D  ++ + EA         +K +  +M   V   A++  GG+GYI E
Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAV-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346

Query: 428 RSIARHYRESPANSILLGS 446
            ++ R YR+     I  G+
Sbjct: 347 YAVERFYRDVRLFRIFEGT 365


>gi|145225587|ref|YP_001136265.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145218073|gb|ABP47477.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 387

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 36/303 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A MV    T    K W PK+ S +                   LTE   G+D +A+ ++ 
Sbjct: 95  AWMVDSFGTEEQRKLWVPKLASMD-------------AIASYCLTEPGAGSDASALRTKA 141

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDGSPNGLCYQ 273
            +  D  Y L G K F+S +  SD +I++A+   +G  G   F+VP+        GL + 
Sbjct: 142 VRSGD-EYVLDGVKQFISGAGTSDVYIVMARTGSDGPKGISAFVVPK-----DTPGLSFG 195

Query: 274 RLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
             + K+G  +  T ++            L G     TG    MK L    ++ A  S+ G
Sbjct: 196 TDEVKMGWNAQPTRQVILEGARVPADALLGGPDGEGTGFGIAMKGLNGGRINIAACSLGG 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +  + + Y   R   GG L+D+P ++  +AD+A  +  + AL +R A + D      
Sbjct: 256 AQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLADMATGLETSRALLWRAATALDNDHPDR 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E      +  + K +       V  +A++  GG GY+ E  + +  R+   + IL G+ 
Sbjct: 316 VE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRVHRILEGTN 369

Query: 448 NAM 450
             M
Sbjct: 370 EIM 372


>gi|109898235|ref|YP_661490.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700516|gb|ABG40436.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 600

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 42/300 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+  + ++  K  DG Y L+G K F+S+   D       I++A++    EG 
Sbjct: 164 LTEPHCGSDLGMLKTKAVKNDDGSYNLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGT 223

Query: 253 VGC--FLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLG--- 300
            G   F+VP+   + SP+G    R       +++K+G + +AT  + F    G+L+G   
Sbjct: 224 KGISLFVVPKF--NVSPDGENVDRNAVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTEN 281

Query: 301 -DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351
             LN     +   +I   L+    S +  + +LA A    + R + G          +I 
Sbjct: 282 RGLNCMFTFMNSARIGTGLEGLASSETAFQGALAYAKDRLQFRSMKGVQNPDGPADPIIV 341

Query: 352 QPVMKR--------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            P ++R        A  + AL I A   +   L  S DEA  +  EA  A  + PI K +
Sbjct: 342 HPDVRRMLLTQKAFAEGNRALAIYAMKLVDITLY-SKDEAAKQVSEAKLA-FLTPIVKAF 399

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A    +  M+  GG G+I+E  + +  R++   ++  G+     +D+L     G+N
Sbjct: 400 LTETAQESTSYGMQVFGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLARKVVGSN 459


>gi|108805257|ref|YP_645194.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766500|gb|ABG05382.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 398

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 31/277 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +AL+ +    + W P             PM +        LTE   G+D+  + +  ++ 
Sbjct: 113 IALLGSEEQRQRWLP-------------PMARMEKIGAFALTEPGHGSDVVMLETSAERD 159

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            DG + L+G K W  +   +D  ++ A+ E  G V  FLV +  E     G   +R++ K
Sbjct: 160 GDG-WVLNGRKRWIGNGTFADVVVVWARDEEDGEVKGFLVEKGTE-----GFTAERIEGK 213

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-MSVSGMRVSLAE-AI 336
           IGNRS+   ++   N        L  +    +   +L      +     G  ++  E A+
Sbjct: 214 IGNRSSWQADITLENVRVPAENKLENANSFADTSTVLTNTRYGVAWQALGHALACYEAAV 273

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R + G       +++  +A +  D+     + FRL+   D+ +     A+ A+++
Sbjct: 274 QYAKEREIFGIPQASFQLIQYRLAGMLADLTQMQLVCFRLSQLLDKGEMTHGRASLAKLV 333

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                    +    + AEA + +GG+G + E  + +H
Sbjct: 334 -------TARQGKRICAEARDILGGNGVLLEYLVGKH 363


>gi|324998483|ref|ZP_08119595.1| acyl CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 15/243 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+ AIT++ ++  D  Y +SG K F++S     F+  A   G  G   V 
Sbjct: 127 LGVTEPGTGSDVGAITTRARRDGDD-YVVSGAKTFITSGTRADFVTTAVRTGGPGHRGVS 185

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ +    G        K+G   + T EL F         L+GD    TG V+ M+   
Sbjct: 186 LLIIESDRPGFAVTSKLKKMGWLCSDTAELSFDEVRVPLRNLIGDEG--TGFVQIMQRFE 243

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  + +    SL  A  +AR R   G  L  + V++  +AD+A ++A A     
Sbjct: 244 SERLLMAAQAAATAERSLHLARQWARDRVTFGEPLAHRQVIRHKLADMAREVAVARTFVR 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A  + E     EE A A+  A            +V+  A++  GG GY+ +  + RHY
Sbjct: 304 DVAVRWSEEGHTPEEVAMAKNAA-------VAACDSVVNAAVQIHGGMGYMRDSEVERHY 356

Query: 435 RES 437
           R+S
Sbjct: 357 RDS 359


>gi|112005099|gb|ABH85388.1| isovaleryl-CoA dehydrogenase [Beta vulgaris]
          Length = 409

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 16/253 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +  ++ DG Y L+G+K W  + P +   I+  + +  V    +
Sbjct: 151 LAMSEPNSGSDVVSMKCRADRV-DGGYMLNGNKMWCTNGPTAQTLIVYTKTDMAVHTKGI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P     Q+L +K+G R + T EL F N F      L      V  M   + 
Sbjct: 210 TAFIIEKGFPGFSTAQKL-DKLGMRGSDTCELVFENCFVPQDNVLGEEGKGVYVMMSGLD 268

Query: 318 LDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           L+  +++ SG    M+  L   + Y R+R   G  +     ++  +AD+   + ++ +  
Sbjct: 269 LERLVLA-SGPLGIMQACLDVVLPYVRQREQFGRPIGQFQFIQGKVADMYTSLQSSRSYV 327

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A   D  +   ++ A   + A        + A  V  +A++C+GG GY+ E S  R 
Sbjct: 328 YSVARDCDSGQVDPKDCAGVILCA-------AERATQVALQAIQCLGGHGYVNEYSTGRL 380

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 381 LRDAKLYEIGAGT 393


>gi|317470554|ref|ZP_07929942.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316902069|gb|EFV23995.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 632

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE+  G+D A  T     +    Y L+G K F+++   +D +++ A     +G   +
Sbjct: 123 FGLTEQNAGSD-AGGTETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +    +K+G RS++T EL F++     +   N+     E  KI +  
Sbjct: 182 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMST 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+A  +  A  L
Sbjct: 239 LDGGRIGIAAQALGIAQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A+  +  +    E+A A       K +   +   V+ +A++  GG+GY++   + R
Sbjct: 299 VYSAADLKENHEPYGLESAMA-------KQYTSDICLEVVNDALQIFGGTGYLKGMDVER 351

Query: 433 HYRESPANSILLGS 446
            YR++   +I  G+
Sbjct: 352 AYRDAKICTIYEGT 365


>gi|218777918|ref|YP_002429236.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759302|gb|ACL01768.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 387

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256
           G G+TE   G+D+ AI ++   + D  Y L+G K W  ++  +D  I+ A  +       
Sbjct: 123 GFGITEPNAGSDVLAIETEATDMGDH-YVLNGSKTWISNAHQADVIIIYAYTDKSAKTKG 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L   ++E  + NG+    L NK+G+ S+ T EL F NT    +   N+   P +  +I+ 
Sbjct: 182 LSAFIVEPRNFNGIKTTDL-NKMGSHSSPTGELFFDNT---RVPKENLLGKPGDGARIVF 237

Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L +A  +V   +  L  A  Y  +R   G  +    + +  IA +  +I AA 
Sbjct: 238 SSLANTRLSAAAGAVGCAQACLDIATKYITKREQFGKSVGTFQMNQDLIAQMTTEIEAAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ +   D+    +  A          KY+  + A       M  +G  GY  E  +
Sbjct: 298 LLVYKASWQKDQGMENNGMAV------AQAKYFAGETAMKCANYGMRLMGAYGYSTEYPL 351

Query: 431 ARHYRESPANSILLGSGN 448
           AR+YR+ P   ++ GS N
Sbjct: 352 ARYYRDIPTYVLVEGSAN 369


>gi|83718837|ref|YP_441936.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|257138109|ref|ZP_05586371.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83652662|gb|ABC36725.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 395

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGSKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +++      +   +LE G   GL    +  K+G R++ T E+     F     +L ++  
Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENILPNVKG 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  +  R++V      G  L    ++++ +
Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  A  +   A + +
Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDECTAAVE-------ITSIMKRNSCGKALDIARLARDML 349

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 350 GGNGISDEFGVARH 363


>gi|304320145|ref|YP_003853788.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303299048|gb|ADM08647.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 591

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           L+E   G+ +A IT++     DG Y + G K ++S     +S+  I  +LA++ G     
Sbjct: 159 LSEPHAGSSLADITTKAIPQEDGSYKIIGRKMWISGGDHELSENIIHLLLAKIPGGPEGI 218

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD- 301
             +  F+VP+   D     G  N +    L +K+G +      L F       G L+G+ 
Sbjct: 219 KGISLFIVPKKRVDDEGGVGERNDVALAGLNHKMGYKGITNCALNFGENEACIGELVGEP 278

Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGGI-LID 351
              L      + + ++ + L +A +  SG + SLA A    + RH       SG I +I+
Sbjct: 279 HNGLRYMFQMMNEARVAVGLGAAALGQSGYQASLAYAKERPQGRHPDEKTPGSGQIPIIE 338

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----EAAYARIMAPITKYWCCKM 407
              ++R +      +  A AL    A   D  +   E    +A     + PI K W  + 
Sbjct: 339 HADIRRLLLAQKAAVEPALALGLFCAILLDRIELGEETAETDALLLDFLTPIAKSWPSEF 398

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  A++ +GG+GY ++  + R YR++  N I  G+      D+L 
Sbjct: 399 CLEANKHAIQVLGGAGYTKDYPVERLYRDNRLNPIHEGTHGIQGQDLLG 447


>gi|295099579|emb|CBK88668.1| butyryl-CoA dehydrogenase [Eubacterium cylindroides T2-87]
          Length = 379

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++   ++ +I+ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGTKIFITNAGEAEVYIIFAMTDKSKGTRG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   ++E G+P G  +   + K+G R +AT EL F+N     +   N+     +  KI +
Sbjct: 181 ISAFIVEKGTP-GFTFGLHEKKLGIRGSATSELIFNNV---RIPKENLLGKEGQGFKIAM 236

Query: 317 Y-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +A     E I Y + R   G  +      +  +AD+   + AA 
Sbjct: 237 QTLDGGRIGIAAQALGIAQGAIDEVIPYVKARKQFGRPIAKFQNTQFQLADMQTKVDAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +  A + +E +  +  AA A++ A        ++A  V  +A++ +GG GY  +  +
Sbjct: 297 WLVYSAAMAKEEGRPYTTLAAEAKLFA-------AEVAMEVTTKAIQLMGGYGYTRDLPV 349

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 350 ERMFRDAKITEIYEGT 365


>gi|325915156|ref|ZP_08177482.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538678|gb|EGD10348.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 597

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 48/296 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249
           LTE   GTD+  + ++ +  +DG Y ++G K F+++    ++D  + L         A  
Sbjct: 166 LTEPHCGTDLGLLKTRAESNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225

Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +G +  F+ P+         G  N L    +++K+G + + T  + F    G+L+G    
Sbjct: 226 KG-ISLFVTPKFKVGRDGVVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354
              P + ++ +   +++A +SV    + L+E     A+ Y R     R +SG    D+P 
Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRSLSGAKFPDKPA 338

Query: 355 --------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400
                   ++R +  I      +  L+   A+  D        + R++       + PI+
Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVSHRGVSEQERADAETLVSFLTPIS 398

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K    + +      A++C GG GYI E  + +  R++   +I  G+     LD++ 
Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454


>gi|217969167|ref|YP_002354401.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506494|gb|ACK53505.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 377

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 36/263 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG----- 254
           LTE   G+D +AI +    + DG  + L+G K F+++   +D  I+ A  +   G     
Sbjct: 123 LTEPHVGSDASAIRTSA--VRDGNEWVLNGVKQFITTGKHADVAIVFAVTDKAAGKKGIT 180

Query: 255 CFLVPRLLEDGSPNGLCYQ--RLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVS 305
           CFLVP        N   YQ  R++ K+G +++ T ++ F +         G       ++
Sbjct: 181 CFLVP-------ANAPGYQVGRIEEKMGQKASDTTQILFEDCRIPADSVVGKEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A   +   R +L  A+ YA+ R   G  + +   +   +AD+A  
Sbjct: 234 LSNLEAGRIGI----AAQCLGMARAALEAAVKYAQERESFGKPIFEHQAVNFRLADMATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L +  A+  D  +   +EA+ A++ A        +MA  V ++A++  GG GY+
Sbjct: 290 LEAARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAERVCSDAIQVHGGYGYV 342

Query: 426 EERSIARHYRESPANSILLGSGN 448
            +  + R YR+     I  G+ +
Sbjct: 343 TDFPVERIYRDVRVCQIYEGASD 365


>gi|193077432|gb|ABO12244.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 607

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283

Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +   G L+G+       +  M    +I + L +A +  +G       A+ YA+ R V G
Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388
                         LI    ++R +      ++ A AL    A      +S ++A+ R +
Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 398

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458

Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LD+L     L +G +   L E++ +T+E        K    L+D      +   L R
Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIEL------AKAEPSLKDHADQLDQKWQLIR 512

Query: 503 FLTEKI 508
            +TEK+
Sbjct: 513 NVTEKL 518


>gi|146306407|ref|YP_001186872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574608|gb|ABP84140.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 387

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 33/278 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV--EGRVG--CF 256
           LTE   G+D A + ++ ++  D  Y + G K F+S   S D  I++A+   +G  G  CF
Sbjct: 124 LTEPDAGSDAANLRTRARRDGDD-YVIDGSKCFISGAGSTDVLIVMARTGEDGAKGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LVP         G+ Y R ++K+G ++  T  + F       S+  G          G V
Sbjct: 183 LVP-----ADAPGVRYGRNEDKMGWKAQPTRTIAFDGVRIPASHRIG------PEGEGFV 231

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MK L    L+ A  S+   + +L +++ Y   R   G  L +   ++  +AD+  D+ 
Sbjct: 232 YAMKGLDGGRLNIASCSLGAAQAALQQSLRYVEERKQFGKPLSEFQALQFKLADMLTDLT 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+  +    A+  D           A +   + K +      +V  EA++  GG GY+ +
Sbjct: 292 ASRQMVRLAAHKLDRGHGE------ASLYCAMAKRFATDHCFSVCNEALQLHGGYGYLND 345

Query: 428 RSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
             + R  R++  + IL G+   M V+    LL++G  L
Sbjct: 346 YPLERWVRDARVHQILEGTNEIMRVIVARRLLQQGGML 383


>gi|33591541|ref|NP_879185.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571183|emb|CAE40687.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332380941|gb|AEE65788.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 389

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 21/279 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D+AA+  + +   DG Y L+G K W  +  ++D + + A+
Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181

Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303
                G   +   + D G+P     +R+     + +     A   +  S   G       
Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           ++      M + I+  S + +  G  R +L E +  AR R + G  L D  + + A+ D+
Sbjct: 242 LAM-----MTLDIFRASVVAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  + A+  L++R A   D  + R+  EAA A++ A        + A AVI  A++  GG
Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +G +   ++ R YRE  A  I  G+     L +   L K
Sbjct: 350 AGVVAGTTVERLYREIRALHIYEGATEVQKLIIARELLK 388


>gi|99082079|ref|YP_614233.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99038359|gb|ABF64971.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 384

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  +       P  ++  AI    LTE + G+D+A  T    +  D  Y L+G K 
Sbjct: 98  AISLFGTDAQKAEWLPKTRSGAAIAAFALTEPQSGSDVANSTMTAVRDGDD-YVLNGEKT 156

Query: 233 WFLSSPMSDAFIMLAQV------EGRVGCFLVPRL--------LEDGSPNGLCYQRLKNK 278
           W  +  ++D + + A+       +G     + P L        LE  +P+ L   R  + 
Sbjct: 157 WISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLATLRFSD- 215

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAI 336
                   V +  S   G       ++      M +L    S + + + G  R +L EA+
Sbjct: 216 --------VRIPASAMIGAPGQGFRIA------MSVLDVFRSTVAAAALGFARRALDEAL 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARI 395
                RHV G  L D  +++  IAD+ALD+ AA  L +R A + D   +R + EAA A  
Sbjct: 262 WRVTERHVQGAPLFDLQMVQGHIADMALDVDAAALLVYRAAWTKDSGAARVTREAAMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                K +  + A  VI +A++  GG G      + + YRE  A  I  G+ +
Sbjct: 320 -----KLFSTEAAQVVIDKAVQLFGGEGVRSGAMVEKLYREIRALRIYEGASD 367


>gi|329122109|ref|ZP_08250717.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965]
 gi|327466916|gb|EGF12432.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965]
          Length = 378

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 19/265 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  A+    QK+ DG Y L+G K F+++  +++  ++        G   +
Sbjct: 121 FALTEPGAGSDAGAVACHAQKV-DGGYILNGTKCFITNGSIAEKIVVFTNTRKTGGIRGL 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVED 311
              + D +  G+   + ++K+G R++ T E+ F + F      LG       ++   +E 
Sbjct: 180 TAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFVPESSRLGREGMGFKIAMKTLEK 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++      +SV   + SL  A+ YA +R   G  +    +++  IAD+ +   +A A
Sbjct: 240 SRPVV----GALSVGIAQASLESAVRYAHQRKQFGSKISSFEMVQDMIADMVIKTESARA 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  +     D       +     I +P+ K +   +A  V   +++ +GG+GY +E    
Sbjct: 296 LVQKACWMLD------NDMPSKGIFSPMAKAYASDVAMEVSTISVQVMGGNGYSKENPNE 349

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           ++ R++    I  G+     + + N
Sbjct: 350 KYMRDAKVMQIYEGTNQVQKIVIAN 374


>gi|16080770|ref|NP_391598.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311679|ref|ZP_03593526.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221316006|ref|ZP_03597811.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320917|ref|ZP_03602211.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325201|ref|ZP_03606495.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|1168281|sp|P45867|ACDA_BACSU RecName: Full=Acyl-CoA dehydrogenase
 gi|853760|emb|CAA89868.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636254|emb|CAB15745.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 39/285 (13%)

Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           T +A+G       LTE   G+D  ++ +  ++I D  Y L+G K F+++  ++D +I+ A
Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +       V  F+V +  E     G    + + K+G RS+ T E+ F +        L
Sbjct: 171 VTDPEKKKKGVTAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           G+        E  KI +  LD     ++   V +A+     A+ YA+ R   G  + +Q 
Sbjct: 226 GEEG------EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A  I A+  L+++ A          + +A +++MA  T       A  V  
Sbjct: 280 GIAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EA++  GG GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 333 EAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377


>gi|85094673|ref|XP_959935.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28921392|gb|EAA30699.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 436

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 29/256 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++     +G+Y LSG K W  +SP++D  ++ A
Sbjct: 163 MAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKEGVYLLSGSKTWITNSPIADVLVVWA 222

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           +++  G++  FLV R      P  L   ++KNK G R++ T  ++  N       +  ++
Sbjct: 223 KLQETGKIRGFLVER--SACPPGTLETPQIKNKTGLRASITGMIQLDNCPVPKENMFPEI 280

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
               GP         L+SA   ++ GM  +L + +  AR     R+   G  L    +++
Sbjct: 281 EGLKGP------FTCLNSARFGIAFGMMGALEDCLARARTYALERKQFKGNPLAKYQLVQ 334

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +A+ A D+A  T  + ++    DE K+  E       M  + K   C           
Sbjct: 335 KKLAEAATDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRTLYHARTLQ 387

Query: 417 ECIGGSGYIEERSIAR 432
           E  GG+   +E  I R
Sbjct: 388 EIFGGNAVSDEYHIGR 403


>gi|256845081|ref|ZP_05550539.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256718640|gb|EEU32195.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 381

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   ++ ++++A  +   G   +   + + +  G    + + K+G R ++T EL 
Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341
           F N       LLGD        +  KI ++ LD   + ++   + +A     EAI YA+ 
Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAIGYAKE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L      +  IA++ + + AA  L ++ A         S +AA A++ A  T 
Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|256380944|ref|YP_003104604.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255925247|gb|ACU40758.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 612

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 46/298 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   G+D+ A  ++  +  DG + L G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHLDGVKRFITSGDQDLTENIMHLVLARPEGPGIES 223

Query: 252 RVGC-----FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TF 295
           R G      FLVP+   D       G  NG     +++K+G +++ T EL F        
Sbjct: 224 RPGTKGLSLFLVPKFHFDSETGKSTGERNGAFVTNVEHKMGLKASTTCELTFGQHGVPAK 283

Query: 296 GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
           G+LLG+  V  G  +  +++ Y  +     ++  +      A+ YA+ R  S  +     
Sbjct: 284 GWLLGE--VHNGIAQMFQVIEYARMMVGTKAIGTLSTGYLNALAYAKERVQSADLTRMTD 341

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMA 397
                  +   P ++R++           A+    A   D  K   E  A A     ++ 
Sbjct: 342 KTAPRVTITHHPDVRRSLMLQKAYAEGLRAVYLYTATFQDRIKLGGEGQALAEKVNDLLL 401

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           P+ K    + A   +A++++ +GGSG++++  I ++ R+S  +S+  G+     LD  
Sbjct: 402 PVVKGVGSERAYEQLAQSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQSLDFF 459


>gi|237744392|ref|ZP_04574873.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|256027164|ref|ZP_05440998.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|260494055|ref|ZP_05814186.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289765142|ref|ZP_06524520.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|229431621|gb|EEO41833.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|260198201|gb|EEW95717.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289716697|gb|EFD80709.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 381

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           W    F  E       P   +   IG  GLTE   GTD A   +   Q    G + L+G 
Sbjct: 96  WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   ++ ++++A  +   G   +   + + +  G    + + K+G R ++T EL 
Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341
           F N       LLGD        +  KI ++ LD   + ++   + +A     EAI YA+ 
Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAIGYAKE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L      +  IA++ + + AA  L ++ A         S +AA A++ A  T 
Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|262378082|ref|ZP_06071239.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|262299367|gb|EEY87279.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K +++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLRTTAVKDGD-FYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P G+   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EADNP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+ YA  R   G  +    +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D+ ++ S EA+        +K +  +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E SI R YR+
Sbjct: 347 EYSIERFYRD 356


>gi|255318743|ref|ZP_05359970.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378078|ref|ZP_06071235.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304241|gb|EET83431.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299363|gb|EEY87275.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K +++ +P++  + ++A+        G + 
Sbjct: 124 LTEPESGSDAASLKTTAVKDGD-FYILNGTKRYITNAPLASTYTVMARTNPDIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     + +G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFVVDR-----NTSGISLGKKDKKMGQQGTYTCDVIFENCRVPASALIGGVE-GIGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +S + V  AE     A+ YA  R   G  +    +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHISAVSVGAAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D+  + S E++ A++ A        +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDQGLNVSTESSCAKLFA-------TEMCGRVADHCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E SI R YR+
Sbjct: 347 EYSIERFYRD 356


>gi|332305778|ref|YP_004433629.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173107|gb|AEE22361.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 126/255 (49%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D F++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDH-YVLNGNKMWITNGPDADVFVIYAKTDVSAGSKGM 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G+P     Q+L +K+G RS+ T EL F +     +   N+     +  ++L+ 
Sbjct: 189 SAFIVERGTPGFSQAQKL-DKLGMRSSNTCELVFEDCS---VPAQNLIRNEGDGARVLMS 244

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG  + + +A     + Y   R   G  + +  +++  +AD+   + AA A
Sbjct: 245 GLDYERLVLSGGPLGIMQACMDLVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQMNAARA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA A I+      +  ++A  +  +A++ +GG+GYI E    
Sbjct: 305 YVYTVARACDRGETTRKDAA-AVIL------YSAELATKMALDAIQLLGGNGYINEFPAG 357

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 358 RLLRDAKLYEIGAGT 372


>gi|323449016|gb|EGB04908.1| hypothetical protein AURANDRAFT_59443 [Aureococcus anophagefferens]
          Length = 628

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 60/339 (17%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           S +++A   +P     W PK+ S E   T             + L+E   G+ +  + + 
Sbjct: 163 SITLLAAHGSPEQQATWLPKLTSGEAYGT-------------MCLSESHAGSSLTDLRTS 209

Query: 218 GQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFLVPRLLEDGS 266
                DG Y + G+K +++     +S+  +  +LA++ G       +  FLVP++LE+G+
Sbjct: 210 AAPNGDGSYAIKGNKMWITGGDQGLSENIVHFVLAKLPGAPPGVKGISLFLVPKVLENGA 269

Query: 267 PNGLCYQRLKNKIGNRSNATV-ELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            N +    + +K+G  ++    EL F +      G+L+G+      P E +K +  + + 
Sbjct: 270 RNDVYLGGMNHKMGQIASVNAGELLFGDRTGAATGYLVGE------PHEGLKCMFVMMNE 323

Query: 322 IMSVSGMRVSLA------EAIHYARRRHVSGGILIDQ-------PVMKRAIADIALDIAA 368
           +    GM  + +       A+ YAR R   G  L  +       P+++ A     L  A 
Sbjct: 324 LRVGVGMGAAASGVAGYTAALRYARDR-AQGRPLTSKDPAAPMVPIVQHADVKRMLLAAR 382

Query: 369 A-----TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A      ALS   A   D      +A ++ E      ++ P+ K W  +        A++
Sbjct: 383 AYSEGGVALSLYGAELIDKMAVCEDAAAKQELHLVLELLIPMIKSWPSEWGLEANRLAIQ 442

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+GY  +  + + YR++  NSI  G+     LD+L 
Sbjct: 443 VHGGAGYTTDFIVEQLYRDARVNSIYEGTTGIQSLDLLG 481


>gi|229020563|ref|ZP_04177305.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229026781|ref|ZP_04183113.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228734504|gb|EEL85166.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228740727|gb|EEL90983.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 376

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A 
Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364


>gi|167629183|ref|YP_001679682.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167591923|gb|ABZ83671.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 380

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 35/274 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLA 247
           AP+    +     LTE   G+D A++T       +G Y  L+G+K F+++  S+A + + 
Sbjct: 112 APLAAGEIIGAYALTEPNAGSDAASLTLMAS--DEGEYWRLNGNKVFITNA-SEAGLFIT 168

Query: 248 QV---------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            V         EG + C +V R        G+   R   K+G   + T EL F N    L
Sbjct: 169 FVRTDPASRGAEG-ITCLIVER-----DTPGMTVSRPVEKMGLNGSVTCELHFDNA---L 219

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           +   NV     +  K+ +  LD   ++++   + +AE     A+ Y R+R   G  +   
Sbjct: 220 VPKENVLGDVGQGFKVAMQLLDGGRIAIAAQGLGIAEGALEYALRYIRQREQFGRPIAAN 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A ++ AA  L +R A      K   +EAA A+  A  T       A  V 
Sbjct: 280 QGIQWMVADLATEVDAARLLVYRAAWLKTMGKPHGKEAAMAKKFATDT-------AMRVT 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ ++ +GG GY  E  + R+ R++    I  G+
Sbjct: 333 SDCVQLLGGYGYTREYPVERYMRDAKVTQIYEGT 366


>gi|18311282|ref|NP_563216.1| butyryl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|110801111|ref|YP_696974.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110802678|ref|YP_699561.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101]
 gi|168205130|ref|ZP_02631135.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|168211629|ref|ZP_02637254.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|168213211|ref|ZP_02638836.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|168216735|ref|ZP_02642360.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
 gi|169347121|ref|ZP_02866063.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|18145965|dbj|BAB82006.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|110675758|gb|ABG84745.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110683179|gb|ABG86549.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101]
 gi|169296804|gb|EDS78933.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|170663276|gb|EDT15959.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|170710390|gb|EDT22572.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|170715210|gb|EDT27392.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|182381237|gb|EDT78716.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 24/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD A    Q   + +G  Y L+G K F+++  ++D FI+ A
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTDAAG--QQTTAVLEGDNYILNGSKIFITNGGVADTFIIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   + + +  G    +L+ K+G R+++T EL   N       L+G    
Sbjct: 171 MTDKSQGTRGISAFIVEKNFPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGK 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
             G    MK L   D   + ++   + +AE     A+ Y + R   G  L     ++  +
Sbjct: 231 GFGIA--MKTL---DGGRIGIAAQALGIAEGALEEAVAYMKERKQFGRSLSAFQGLQWMV 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I AA  L ++ A   +E K  S +AA A++ A         +A  V  +A++  
Sbjct: 286 AEMDTKIEAARFLVYKAACLKEEGKPYSIDAARAKLFA-------ADVAMEVTTKAVQLF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY +E  + R  R++    I  G+
Sbjct: 339 GGYGYTKEYPVERMMRDAKITEIYEGT 365


>gi|325955609|ref|YP_004239269.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323438227|gb|ADX68691.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 452

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 39/256 (15%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCF 256
            GLTE    +  A  +T+  +K  +G       KW  ++P +D FI+ A+   + +V  F
Sbjct: 194 FGLTEPEVDSGAAGGLTTTCEKTENGWLLNGEKKWIGNAPFADVFIIWARDIADDQVKGF 253

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNR---------SNATV----ELEFSNTFGFLLGDLN 303
           LV    E  +P G+  +++K K+  R         +N  V    +LE +NTF      L 
Sbjct: 254 LV----EKDNP-GISVEKIKGKMALRIVQNGQITLNNCLVPDTDKLEKANTFKDTANVLR 308

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++   V           A M+    R +   A+ Y R+R   G  +    +++  + ++ 
Sbjct: 309 MTRAGV-----------AWMATGCARGAYENALDYTRKREQFGKPIASFQLIQGHLVEML 357

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ A   + +RL+   DE K + E A+ A++       +C      ++A A E +GG+G
Sbjct: 358 SNLTAMQTMVYRLSKIQDEGKLKDEHASLAKV-------FCTLRTRDIVAHAREVMGGNG 410

Query: 424 YIEERSIARHYRESPA 439
            + + ++AR   ++ A
Sbjct: 411 ILLDHNVARFVADAEA 426


>gi|239996054|ref|ZP_04716578.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii ATCC
           27126]
          Length = 384

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV--EGRVG--CF 256
           LTE   G+D A++ ++  K +DG Y L+G K F+S   S D  +++A+   +G  G   F
Sbjct: 124 LTEPGAGSDAASLKTKATK-ADGGYVLNGSKVFISGAGSTDVLVVMARTGEDGPKGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309
            VP      + +G+ Y + + K+G  +  T  + F N      +LLG+      ++   +
Sbjct: 183 AVP-----ANTDGIEYGKAEEKMGWNAQPTRMITFDNVKLDASWLLGEEGQGFKMAMQGL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A  SV   + +L  A  Y   R   G  +     ++  +AD+A ++ AA
Sbjct: 238 DGGRINI----ATCSVGTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAA 293

Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +    A   D     ++   A A+  A    +  C        +A++  GG GYI+E 
Sbjct: 294 RQMVRMAACKLDNNDPDKTTYCAMAKRFATDVGFNVCN-------DALQLHGGYGYIKEY 346

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + RH+R+   + IL G+   M
Sbjct: 347 PLERHFRDVRVHQILEGTNEIM 368


>gi|256395892|ref|YP_003117456.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362118|gb|ACU75615.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 390

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 143/334 (42%), Gaps = 62/334 (18%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKT 194
           +M +L  G      + S S+  L+T P +        + W PK+ + +            
Sbjct: 72  VMEELGRGDTAVRGIVSVSL-GLVTKPLLAYGTEDQKRRWIPKLTAGD------------ 118

Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
             A+G  GLTE   G+D   + ++  +    G + L+G K F+++   +D  ++ A+   
Sbjct: 119 --ALGCFGLTEPGNGSDAGHLKTKAVRDEKTGDWLLTGSKLFITNGTWADLALIFARTGA 176

Query: 252 RVGC----------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFL 298
           + G           FLVP         G   + +K K+G R  AT EL   E        
Sbjct: 177 KDGAPDDGPRGITAFLVPT-----DTPGFQAREIKGKLGLRGQATAELILDEVRVPDDAR 231

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352
           LG++       +  KI +  LD   MSV+   V L +A     + YA  R   G  + + 
Sbjct: 232 LGEIG------QGFKIAMSTLDKGRMSVAAGCVGLIQACLDASVGYAAERDQFGKPIANY 285

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  +ADI++D+ A   L +R+A+  +     +  A+ A       K +C + A    
Sbjct: 286 QLVQEMLADISVDLDAGRLLVWRVADLIERGLPYATAASTA-------KLFCSEAAVRAA 338

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             A++  GG GYI+E  + ++ R++   ++  G+
Sbjct: 339 NNAIQVFGGYGYIDEYPVGKYLRDARVLTLYEGT 372


>gi|301346698|ref|ZP_07227439.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301510079|ref|ZP_07235316.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|193076509|gb|ABO11161.2| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 403

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 177

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370


>gi|134101122|ref|YP_001106783.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913745|emb|CAM03858.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 151/361 (41%), Gaps = 48/361 (13%)

Query: 121 DRSFEPVVRKQAHK--IRAARLYLMAQLEAGHLMSPSVTSASMVA----LMTTPRVHKDW 174
           D+   PVVR+  H      A +  M QL    L  P     + V+    ++ T  + + W
Sbjct: 23  DKEVRPVVRELEHSGTYPEALIEQMKQLGIFGLAVPESYGGTPVSTPCYVLVTEELARGW 82

Query: 175 ------------APKI---FSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218
                         K+   F  E       P M    V   + LTE  GG+D+ A+ +  
Sbjct: 83  MSLAGAMGGHTVVAKLLLRFGTEEQKRRYLPGMATGEVRATMALTEPGGGSDLQAMRTVA 142

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCY 272
            + +DG Y ++G K W  +S  S    ++ + + R      G  ++  L+E G   GL  
Sbjct: 143 SRDADG-YVVNGSKTWITNSRRSQLIALMCKTDPRAEPAHKGISIL--LVEHGP--GLTV 197

Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327
            R   K+G +   + EL F +   +   +LG +    G  + MK L    L  A  ++  
Sbjct: 198 SRDLPKLGYKGVESCELSFDDYRASADAVLGGVE-GAGFAQMMKGLETGRLQVAARALGV 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L +++ YA+ R   G  +     +   +AD+A   +AA  L+   A  +D  +   
Sbjct: 257 ARAALEDSLAYAQERESFGKPIWQHQSIGNYLADMATSFSAARQLTLHAAREYDAGRRVD 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A++ A  T       A  +  +A+   GG GY  E  + R++R++P   +++G G
Sbjct: 317 MEAGMAKLFASET-------AMRIALDAVRIHGGYGYSTEFDVERYFRDAPL--MIVGEG 367

Query: 448 N 448
            
Sbjct: 368 T 368


>gi|319426128|gb|ADV54202.1| isovaleryl-CoA dehydrogenase, LiuA [Shewanella putrefaciens 200]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|88706436|ref|ZP_01104141.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71]
 gi|88699372|gb|EAQ96486.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71]
          Length = 386

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 35/302 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + SM+    +P V ++W P +            M KT  +    LTE   G+D A++ + 
Sbjct: 93  ATSMIGRYCSPAVIEEWCPDLV-----------MGKTLAS--YCLTEPGAGSDAASLRTS 139

Query: 218 GQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
              ++DG  Y ++G K F+S       +++    G  G   V  LL      G+ Y + +
Sbjct: 140 A--VADGDDYLVNGSKVFISGAGETDVLVVMLRTGDAGPKGVSALLVPADAPGITYGKKE 197

Query: 277 NKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            K+G  +  T  + F N     G  LG       ++   ++  +I I    A  SV   +
Sbjct: 198 EKMGWNAQPTRMVTFDNVRVPKGNRLGAEGQGFAIAMEGLDGGRINI----ATCSVGTAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SE 388
            +L EA  Y   R   G  + +    +  +AD+  ++ AA  +    A+  D    + S 
Sbjct: 254 QALQEAADYVAEREQFGQAIAEFQATQFKLADMLTEVVAARQMVRLAASKLDSKDGQAST 313

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A+ +A    +  C        EA++  GG GYI E  + RH R++  + IL G+  
Sbjct: 314 YCAMAKRLATDLGFRVCN-------EALQLFGGYGYIREYPMERHVRDTRVHQILEGTNE 366

Query: 449 AM 450
            M
Sbjct: 367 IM 368


>gi|325276762|ref|ZP_08142473.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324098104|gb|EGB96239.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 268

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 29/197 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P I S E  PT             + LTE + G+D+  +  + +   DG Y ++G+K F+
Sbjct: 74  PGIVSGEILPT-------------MCLTEPQAGSDLGLLRCRAEPSGDGRYAITGNKLFI 120

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           S    D       ++LA++ G       +   LVP+ LEDG  N +  + L++K+G R +
Sbjct: 121 SGGDHDLTRQIVHLVLARLPGAPAGSRGLSLLLVPKWLEDGQRNAVQCEGLEHKLGIRGS 180

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  L F    G+L+G  +          + + ++SA + V    ++ AEA     R + 
Sbjct: 181 ATCALRFEAASGWLVGQAHGGLA-----AMFVMMNSARLHVGLQGLAHAEAAWQCAREYA 235

Query: 345 SGGILIDQPVMKRAIAD 361
                ++ P   +  AD
Sbjct: 236 MARRQMNAPGQPKGQAD 252


>gi|299529428|ref|ZP_07042865.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298722291|gb|EFI63211.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 395

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G+K W  + P +D  ++ A+ E  +G   V
Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPEMGARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG LN+        K+L
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENILGGLNMGA------KVL 243

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  +     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 304 RSFAYTVAKNLDLLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRLWRDAKLYEIGAGT 378


>gi|163750402|ref|ZP_02157642.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161329892|gb|EDQ00878.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y  +G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYIFNGNKMWITNGPDAQTYVVYAKTDLHKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +  +K+G R + T EL F +       +LG LN      + +K+L
Sbjct: 189 TAFIVDRDSKGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENILGGLN------KGIKVL 242

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M   +   I Y   R   G  + +  +++  +AD+   + AA
Sbjct: 243 MRGLDYERVVLSGGPLGIMNACMDIVIPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +
Sbjct: 303 KSYVYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYA 355

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 356 TGRLLRDAKLYEIGAGT 372


>gi|149377154|ref|ZP_01894903.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893]
 gi|149358572|gb|EDM47045.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893]
          Length = 600

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+ +A I +      +G Y + G K ++S            ++LA+V+G   
Sbjct: 162 MALTEPHAGSSLADIRTSATPTDEGHYLIKGAKIYISGGEQSLTENIVHMVLAKVKGAPA 221

Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F+VP+ +  EDG+    NG+    L +K+G R   +  L F +     G+L+G
Sbjct: 222 GVKGISLFIVPKFIVDEDGNATERNGVNLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVG 281

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349
           +    L      + + ++ +   +A++   G   SL  A    + R  S          +
Sbjct: 282 EPHQGLKYMFQMMNEARVGVGFGAAVIGYRGYMHSLEYAKDRLQGRKPSEKNPEAPQVPI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYW 403
           I+   ++R +           AL    A   D+       + R E      ++ P+ K W
Sbjct: 342 IEHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAW 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             +  P     A++  GG+GY  E  + + +R++  N I  G+     LD+L
Sbjct: 402 PSEFGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453


>gi|170727562|ref|YP_001761588.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812909|gb|ACA87493.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLDKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + D    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVDRDSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + Y   R   G  +    +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 IYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|212640555|ref|YP_002317075.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212562035|gb|ACJ35090.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 383

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 58/316 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223
           T    + + PK+ S EY                LG   LTE   G+D+A++ +    I D
Sbjct: 102 TEEQKQKYVPKLASGEY----------------LGAFCLTEPGAGSDVASLKTTA--IRD 143

Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G  Y L+G K F+++   +D +I+ A+   E +    +   ++E  +P GL   + + K+
Sbjct: 144 GDHYVLNGSKVFITNGGEADTYIVFARTNPEEKGSKGVSAFIVEKHTP-GLVIGKDEKKM 202

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------KI-LIYLDSAIMSVSGMRV 330
           G   + TV+L F         D+ V   P E++        KI +  LD   + ++   +
Sbjct: 203 GLHGSRTVQLSFE--------DMRV---PAENLLGEEGDGFKIAMANLDVGRIGIAAQSL 251

Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +AEA      +YA+ R   G  + +Q  +   +AD+A ++ AA  L +R A        
Sbjct: 252 GIAEAALEHATNYAKERIQFGKPIAEQQGVAFKLADMATNVEAAKLLVYRAAFLRTNGMP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +EA+ A++ A  T      M  A+  EA++  GG+GY E+  + R +R++    I  G
Sbjct: 312 CGKEASMAKLFASKT-----AMENAI--EAVQIFGGNGYTEDYPVERLFRDAKVCEIYEG 364

Query: 446 SGNAMVLDVLNLLEKG 461
           +     L +   L +G
Sbjct: 365 TSEIQRLVISKHLFRG 380


>gi|89053818|ref|YP_509269.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88863367|gb|ABD54244.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 383

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 121/293 (41%), Gaps = 42/293 (14%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  +       P  +   AI    LTE + G+D+A  T       D +Y L G K 
Sbjct: 101 AISLFGTDAQKVEWLPKVRAGTAISAFALTEPQSGSDVANSTMTATLDGD-VYVLDGEKT 159

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC-----FLVP---------RLLEDGSPNGLCYQRLKNK 278
           W  +  ++D + + A+     G      F+VP           LE  +P+ L   R    
Sbjct: 160 WISNGGIADVYTVFARTGDAPGARGLSAFVVPADAPGLEVTERLETIAPHPLSTLRFS-- 217

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAI 336
            G R  A+  L  S   GF +            M +L    S + + + G  R +L EA+
Sbjct: 218 -GCRVPASARLGESGA-GFKIA-----------MSVLDVFRSTVAAAALGFARRALDEAM 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARI 395
                RHV G  L D  +++  IAD+A+DI A+  L +R A + D    R + EAA A  
Sbjct: 265 ARVTTRHVQGAPLFDLQMVQGHIADMAVDIDASALLIYRAAWAKDSGAPRVTREAAMA-- 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                K +    A  VI  A++  GG G     ++ + YRE  A  I  G+ +
Sbjct: 323 -----KLFSTDQAQKVIDRAVQLHGGDGVRSGETVEKLYREIRALRIYEGASD 370


>gi|86137099|ref|ZP_01055677.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Roseobacter sp. MED193]
 gi|85826423|gb|EAQ46620.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Roseobacter sp. MED193]
          Length = 509

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 16/270 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           P+        + LTE   G+D+A +  + + + +  + ++G K F+S     MSD  + L
Sbjct: 146 PLASGETIATMCLTEPGAGSDLAQVRCRAEPVGES-WQITGEKIFISGGDQDMSDRILHL 204

Query: 247 -------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                  + ++G +  FL P    DGS N +   R++ K+G  ++ T +L F      L+
Sbjct: 205 VLARTSDSGIKG-LSLFLCPCTRSDGSRNLVTVTRIEEKMGLHASPTCQLAFEGAEAELI 263

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       +  M     +D A+  V+    S   A  YA  R V G  L   P      
Sbjct: 264 GEEGKGLMAMFTMMNHARVDVALQGVAHAARSYDIASSYAAER-VQGRTLDGAPATLDQH 322

Query: 360 ADI--ALDIAAATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           AD+   LD     A++ R +A+       R +  A    + P+ K  C +         M
Sbjct: 323 ADVRRMLDEIDGLAMTGRAMAHLACVTMERGDNPALVEFLTPLIKVHCTEAGIRAAELGM 382

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY+ E  + + YR++   +I  G+
Sbjct: 383 QVLGGYGYLREYRLEQTYRDARITAIYEGA 412


>gi|158314819|ref|YP_001507327.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110224|gb|ABW12421.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 385

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 36/300 (12%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD- 223
           + TP   + W P   + E                 + +TE   G+D+A + +  +   D 
Sbjct: 102 LGTPEQKRRWLPGFVAGE-------------SMFAIAMTEPGTGSDLAGMRTTAKLSEDR 148

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKI 279
             Y L+G K F++  + +D  I+ A+    +     F +  L+ D    G    R  +K+
Sbjct: 149 SHYVLNGAKTFITGGVHADQVIVCARTASPIDTDRRFGISLLVVDTRSEGYSVGRKLDKL 208

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G R + T EL F +       LLG+ N         +   +++I   +   + + +R+  
Sbjct: 209 GLRVSDTAELAFQDVKVPVENLLGEENAGFYYLGQNLPQERLVIAYGAYAQAAAAVRL-- 266

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A HY + R + G  L      K  +A    ++ AA A++ R   + D  +  + EAA 
Sbjct: 267 --AKHYVQERKIFGQPLSSFQNTKFELAACQAEVDAAQAVADRALEAHDANELTAAEAAS 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A++       +C + A  VI   ++  GG G+I E  IAR Y ++  N I  G+   M L
Sbjct: 325 AKL-------FCTETAHRVIDRCLQLHGGYGFINEFPIARLYADNRVNRIYGGTSEVMKL 377


>gi|169631512|ref|YP_001705161.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|133917311|emb|CAJ77670.1| acyl-CoA dehydrogenase [Mycobacterium abscessus]
 gi|169243479|emb|CAM64507.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 614

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 45/288 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 167 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPG 226

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ +   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 227 TKGLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSFGQHGVPAKGWLV 286

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     + D+     +     +++ +      A+ YA+ R V G             
Sbjct: 287 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTR-VQGADMTQLTDKTAPR 345

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSEEAAYAR-IMAP 398
             +   P ++R++    +      AL +  A +F +A +        +E+A     ++ P
Sbjct: 346 VTITHHPDVRRSLMTQKVYAEGLRAL-YLYATTFQDAVAAKTINGVEAEDAVKLNDLLLP 404

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + K    + A   + E+++  GGSG++++  I ++ R++  +S+  G+
Sbjct: 405 VIKGVGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 452


>gi|58581466|ref|YP_200482.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426060|gb|AAW75097.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 407

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 18/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ S+ Q+  D  Y L+G K F+S +  +D  +++A+  G  G   +  
Sbjct: 147 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 204

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
                   G+ Y R + K+G  S  T  +   N     +   N+     E  K+ +  LD
Sbjct: 205 FAVPADAPGISYGRKEEKMGWNSQPTRGVTLENV---RIPAENLLGKEGEGFKMAMKALD 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   +  A+    A RR++      G  L D   ++  +AD+A  + AA  +  
Sbjct: 262 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 321

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D           A +   + K +      A+  +A++  GG GYI E  I R  
Sbjct: 322 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 375

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S  + IL G+   M + V   L  G
Sbjct: 376 RDSRVHRILEGTNEVMRMIVARHLLNG 402


>gi|326468794|gb|EGD92803.1| isovaleryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326481405|gb|EGE05415.1| isovaleryl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 431

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ ++ + + DG + L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N      + +++L+    L+  ++S      M+  L   + Y   R   G 
Sbjct: 262 PHANVLGQIN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D++   S+              +  + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSSDGTQVKTQDCAGAILYAAER 375

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 376 ATECTLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414


>gi|242024758|ref|XP_002432793.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
 gi|212518302|gb|EEB20055.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
          Length = 423

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 29/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           L ++E   G+D+ ++  + +K   G  Y L+G+K W  + P +D  ++ A+ + +     
Sbjct: 161 LAMSEPGSGSDVVSMKLKAEKDPSGKFYVLNGNKFWITNGPDADVLVVYAKTDTKSKPQH 220

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  FL+ +  E     G    +  +K+G R + T EL F N       LLG  N   G 
Sbjct: 221 GISAFLIEKGFE-----GFSTAQKLDKLGMRGSNTCELIFENCKVPAENLLGPEN--KGV 273

Query: 309 VEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              M  L Y +  ++S   V  M+ +   A  Y   R   G  +    +++  +AD+   
Sbjct: 274 YVLMSGLDY-ERLVLSAGPVGLMQAACDVAFDYVHVRKQFGTKIGQFQLLQGKMADMYTR 332

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++A  +  F +A + D  K+  ++ A   +       +C + A  V  +A++C+GG+GYI
Sbjct: 333 LSACRSYMFSVARACDAGKANKKDCAGVIL-------YCAENATQVALDAIQCLGGNGYI 385

Query: 426 EERSIARHYRESPANSILLGS 446
            +    R  R++    I  G+
Sbjct: 386 NDYPTGRLLRDAKLYEIGAGT 406


>gi|194291322|ref|YP_002007229.1| acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225226|emb|CAQ71168.1| putative Acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 395

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 45/296 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCL 228
           + W P++ S E             +   + ++E   G+D+ AI ++   ++  DG  Y +
Sbjct: 120 QKWLPQMASGE-------------LVAAIAMSEPGAGSDLKAIRTRALREQTPDGDCYRI 166

Query: 229 SGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +G K F+++   +D   ++A+ +   G  G  LV  ++E     G    R+  KIG +  
Sbjct: 167 NGAKTFITNGYHADLICVVAKTDPEAGSRGVSLV--MVETRDLPGFRRGRILEKIGQKGQ 224

Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334
            T EL F +        L    G          P E M I      A+ +V+ M+ ++  
Sbjct: 225 DTAELFFDDVVVPCSNLLGTQEGQGFYQLMQQLPQERMII------ALGAVATMQRAIEL 278

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              Y R+R V G  L D       + +    +A    ++   A   D+   R  +     
Sbjct: 279 TTEYVRQRKVFGQPLGD-------LQNTRFKLAECKTVTTIAATFVDDCMQRLMDGQLDA 331

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + K+WC +    VI E ++  GG GY+ E  IAR Y  +  + I  GS   M
Sbjct: 332 ATAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEIM 387


>gi|311745339|ref|ZP_07719124.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577877|gb|EAZ82097.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+    V     L+E   G+D  +  ++  K++   Y L+G K W  +   +  ++++AQ
Sbjct: 113 PLASGEVLGAFCLSEPEAGSDATSQRTEA-KLNGDHYILNGTKNWITNGNSASIYLVIAQ 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +   +G    + ++K+G R         S+T   +  D+ V   P
Sbjct: 172 THPELGHKGISVFIVEREWDGFVVGKKEDKLGIRG--------SDTHSLMFTDVKV---P 220

Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPV 354
           VE+   +       A+ +++G R+ +A             A+ Y++ R   G  +     
Sbjct: 221 VENRIGEEGFGFTYAMETLNGGRIGIAAQALGIAAGAYELALAYSKEREAFGKPISKHQA 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+A  I AA  L ++ A + D+ +  S+ +A       I K +  ++A  V  E
Sbjct: 281 IQFKLADMATQIEAARLLVYKAAWTKDQGEDYSQASA-------IAKLYASQVAMDVTVE 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GY++E  + R  R++    I  G+
Sbjct: 334 AIQVHGGYGYVKEYHVERLMRDAKITQIYEGT 365


>gi|114570211|ref|YP_756891.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340673|gb|ABI65953.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 406

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++  K + G Y L+G K W  +SP++D F++ A+    +G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRATKTATG-YTLNGAKMWISNSPIADVFVVWAKSDAHDGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++     D    GL   ++  K+  R++ T E+   N       LL  ++   GP    
Sbjct: 207 FVL-----DKGMKGLSAPKIGGKLSLRASITGEIVMDNVEVGEDALLPHVSGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +A R++    I  D+P     + ++ +AD+  +I 
Sbjct: 258 --FGCLNRARYGISWGAMGAAEFCWHAARQYGLDRIQFDKPLAQTQLYQKKLADMQTEIT 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA++  E       M  I K   C  A  +   A +  GG+G  EE
Sbjct: 316 LGLQGSLRIGRLMDEAQAAPE-------MISIMKRNNCGKALDIARMARDMHGGNGISEE 368

Query: 428 RSIARH 433
             + RH
Sbjct: 369 FQVMRH 374


>gi|327448686|gb|EGE95340.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA1]
          Length = 382

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVKKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|296331357|ref|ZP_06873829.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676344|ref|YP_003868016.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151472|gb|EFG92349.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414588|gb|ADM39707.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 33/282 (11%)

Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           T +A+G       LTE   G+D   + +  ++I D  Y L+G K F+++  ++D +I+ A
Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGGMKTTAERIGDD-YVLNGSKVFITNGGIADIYIVFA 170

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +       +  F+V +  E     G    + + K+G RS+ T E+ F +    ++   
Sbjct: 171 VTDPEKKKKGISAFIVEKEFE-----GFLTGKKEKKLGIRSSPTTEIMFEDC---VVPAA 222

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           N      E  KI +  LD     ++   V +A+     A+ YA+ R   G  + +Q  + 
Sbjct: 223 NRLGEEGEGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I A+  L+++ A          + +A ++++A  T       A  V  EA+
Sbjct: 283 FKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLLAGDT-------AMKVTTEAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 336 QIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377


>gi|218232874|ref|YP_002370119.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218160831|gb|ACK60823.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 381

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|196041049|ref|ZP_03108346.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|217962831|ref|YP_002341409.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|229094456|ref|ZP_04225527.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|229142085|ref|ZP_04270610.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229199467|ref|ZP_04326130.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|301056810|ref|YP_003795021.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|196028217|gb|EDX66827.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|217063578|gb|ACJ77828.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|228584043|gb|EEK42198.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228641374|gb|EEK97680.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228688938|gb|EEL42766.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|300378979|gb|ADK07883.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 381

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|91793597|ref|YP_563248.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91715599|gb|ABE55525.1| isovaleryl-CoA dehydrogenase [Shewanella denitrificans OS217]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K+ D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLNARKVGD-RYILNGNKMWITNGPDAHTYVIYAKTDISKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGSKGFTQAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMAACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAARSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYNVARSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|21241039|ref|NP_640621.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106331|gb|AAM35157.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 387

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 28/277 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +     D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++E G P     Q+L +K+G R + T EL F+       N  G L G   V    ++
Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGARVLMSGLD 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++++      +  + M V L     Y   R   G  +    +M+  +AD+ + + A  
Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++  ++AA A + A     W       +  +A++ +GG+GYI +   
Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385


>gi|332993023|gb|AEF03078.1| acyl-CoA dehydrogenase family protein [Alteromonas sp. SN2]
          Length = 384

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ ++   + +G Y L+G K F+S   S D  +++A+  G     +  F
Sbjct: 124 LTEPGAGSDAASLKTKATPVDNG-YVLNGAKVFISGAGSTDVLVVMARTGGDGPKGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309
            VP        +G+ Y + + K+G  +  T  + F N        LGD      ++   V
Sbjct: 183 AVP-----ADADGIIYGKAEEKMGWNAQPTRMITFDNVKIDASCRLGDEGQGFKMAMQGV 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A  S+   + +L  A  Y   R   G  +     ++  +AD+A ++ AA
Sbjct: 238 DGGRINI----ATCSIGTAQQALNVARQYLTEREQFGNPIATFQALQFKLADMATELVAA 293

Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +    A+  D   + S    A A+  A    +  C        +A++  GG GYI+E 
Sbjct: 294 RQMVRMAASKLDSKHADSSTYCAMAKRFATDVGFKVCN-------DALQLHGGYGYIKEY 346

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + RH R+   + IL G+   M
Sbjct: 347 PLERHVRDVRVHQILEGTNEIM 368


>gi|228924078|ref|ZP_04087354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835568|gb|EEM80933.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 381

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|254500145|ref|ZP_05112296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436216|gb|EEE42895.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 603

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 36/291 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  I L         A
Sbjct: 170 MNLTEPQAGSDLNALKARAERNDDGTYRVYGQKIFITYGEHDLTDNIIHLVLARLPDAPA 229

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
              G +  FLVP+ L  EDGS    N +    +++K+G   + T  + + +     G+L+
Sbjct: 230 GTRG-ISLFLVPKFLVNEDGSLGARNDVHCAGVEHKLGIHGSPTCTMVYGDEGGATGWLI 288

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGG------ILI 350
           G+ N     +  M     L   I  +     +  +A  YA  R   +V G        + 
Sbjct: 289 GEENKGLACMFTMMNNARLAVGIQGLGVAERACQDAHAYALERKQGNVPGKKGDGMVAIA 348

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWC 404
             P +KR++  +      A A+ +  A++ D A + ++       +  A ++ PI K   
Sbjct: 349 HHPDIKRSLLGMRTRTQVARAICYSCAHAIDMADTATDPDQKKHWSERAGLLTPIAKALS 408

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 V    ++  GG GY+EE  +A+H R++    I  G+     +D++
Sbjct: 409 TDFGVEVATIGVQIHGGMGYVEETGVAQHLRDARIAPIYEGTNGIQSIDLV 459


>gi|149375956|ref|ZP_01893723.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359836|gb|EDM48293.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 383

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 125/308 (40%), Gaps = 40/308 (12%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           AL T   VH D      S   +   +    P   +  A+G + +TE   G+D+ AI +  
Sbjct: 84  ALSTNVMVHSDIVAPYLSHIGNEEQRQYWLPKMVSGEAVGAIAMTEPGAGSDLQAIRTSA 143

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y L+G K F+++   +D  I+ A+ + + G   +   L D S  G    R  +
Sbjct: 144 VKDGDD-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVDTSLPGYSKGRNLD 202

Query: 278 KIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           KIG  S  T EL FS+               F +L+ +L     P E + I        +
Sbjct: 203 KIGQHSGDTSELFFSDMRIPASALLGEEGQGFMYLMREL-----PRERLVI------GAL 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DE 382
            V+  R +L   I+YA+ R + G  L      +  IA +  D         R+  +F DE
Sbjct: 252 GVAAARGALDLTINYAQERELFGQKLAQLQNTRFEIARMETDC--------RVNRAFVDE 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +  E+       A + KY   +M   V    ++  GG GY  E  I+R + ++    I
Sbjct: 304 CIALYEKGELDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTSEYPISRAFIDARVQRI 363

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 364 YGGTSEVM 371


>gi|85067515|gb|ABC69243.1| probable acyl-CoA dehydrogenase [Pseudomonas citronellolis]
          Length = 386

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 28/271 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------STGPVED 311
             ++      G+      +K+G RS+ T ++ F         D+ V       + G    
Sbjct: 182 SLIMVPMKSKGISVSPHLDKLGMRSSETAQVFFD--------DVRVPQRNRIGAEGAGFM 233

Query: 312 MKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           M++L +    L  A   + GM   +   I Y + R   G  LID  V+   +A++  +I 
Sbjct: 234 MQMLQFQEERLFGAASGIKGMEYCVNATIDYCKERKTFGQALIDNQVIHFRMAELMTEIE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              AL+++    +   K  +  A+ A++          ++A  V    ++  GG G++ E
Sbjct: 294 CLRALTYQATEQYIRGKDVTRLASMAKLKVG-------RLAREVTDACLQYWGGQGFMWE 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             I+R YR++   SI  G+   M+  +  L+
Sbjct: 347 NPISRAYRDTRLVSIGGGADEIMLGIICKLM 377


>gi|296808727|ref|XP_002844702.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238844185|gb|EEQ33847.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 431

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ ++ + + DG Y L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGYVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N      + +++L+    L+  ++S      M+  L   + Y   R   G 
Sbjct: 262 PHANVLGKVN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D++    E           +  +  + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSPEGTQVRTQDCAGSILYAAER 375

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414


>gi|226944579|ref|YP_002799652.1| glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226719506|gb|ACO78677.1| Glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 395

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
            GLTE   G+D   + ++ +K +DG Y LSG K W  +SP++D F++ A+  +GR+  F 
Sbjct: 138 FGLTEPNFGSDPGGMATRARK-ADGGYRLSGSKTWITNSPIADVFVVWAKTDDGRIRGF- 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+     F     +  +++   GP      
Sbjct: 196 ---ILEKGW-QGLSAPAIHGKVGLRASITGEIVMDEVFVPEENMFPEVSGLKGP------ 245

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+  +IA  
Sbjct: 246 FTCLNSARYGIAWGALGAAEFCYETARQYTLDRAQFGRPLAANQLIQKKLADMLTEIALG 305

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R+    DE  +  E  +       I K   C  +  +   A + +GG+G  +E  
Sbjct: 306 LQACLRVGRLKDEGNAPVEATS-------IIKRNSCGKSLDIARMARDMLGGNGISDEFG 358

Query: 430 IARH 433
           +ARH
Sbjct: 359 VARH 362


>gi|120405797|ref|YP_955626.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958615|gb|ABM15620.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 386

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T++  K  D  Y L+G K F++S +   +++ A   G  G   + 
Sbjct: 124 LAITEPGGGSDVGHLTTRAVKDGD-CYILNGAKTFITSGVRADYVVTAVRTGGPGAGGIS 182

Query: 260 RLLED----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            ++ D    G   GL   R  +K+G RS+ T EL +++     G L+G  N     +   
Sbjct: 183 LIVVDKDGPGCSPGLQVTRKLDKMGWRSSDTAELSYTDARVPAGNLVGAENTGFLQIAAA 242

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   
Sbjct: 243 FVSERVGLAAQAYSSAQRCLDLTVEWCRSRETFGKPLITRQSVQNTLAEMARRIDVARVY 302

Query: 373 SFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +       ++    E  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 303 THHVVERELAGETNLIAEVCFAKNTAVDAGEW-------VAHQAVQLFGGMGYMAESEVE 355

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YR+     + +G G + +L  L
Sbjct: 356 RQYRD--MRILGIGGGTSEILTAL 377


>gi|13542136|ref|NP_111824.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325567|dbj|BAB60470.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 369

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 59/320 (18%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  ++F+       KA M       GL +TE  GG+D+A I +   K
Sbjct: 87  VIALFGNDEQKKKYLSRVFA------GKAKM-------GLAVTEPGGGSDVANIKTTAVK 133

Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQ 273
             D  Y L+G K F+++  ++D F++LA+          +  F+V R  E     G    
Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSQEKKKHHGMSVFIVERDFE-----GFRSN 187

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSL 332
           ++K K+G R+  T EL   N     + + N+   P      I+ + D +   V+   + +
Sbjct: 188 KIKGKLGVRATDTAELTLENV---KVPEENLVGEPGRGFYYIMTFFDISRAYVAAQALGI 244

Query: 333 AEAIHYARRRHVS----GGILIDQPV-MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE I     R +S     G L  QP  ++  IAD+A  I A   L++             
Sbjct: 245 AEGI---LERTLSILQKDGPLTSQPERVQFTIADMATRIEATKLLTY------------- 288

Query: 388 EEAAYARIMAP------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E A+Y     P      + K +  + A  V  +AME  G  G     SI R +R++    
Sbjct: 289 EAASYIFNFNPNPAVTSMAKAYAAETAVYVSRKAMEVTGIDGLTS--SIERSFRDAKIME 346

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +  +L+ G
Sbjct: 347 IWEGTSEIEKLVIARMLKTG 366


>gi|299529435|ref|ZP_07042872.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298722298|gb|EFI63218.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 376

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP     G+P G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKTAGKKGMSAFIVP----TGNP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ Y++ R   G  + +   + 
Sbjct: 225 AEGEGYKIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+ A  I AA  L +  A+  D      +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG G + +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|290960182|ref|YP_003491364.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260649708|emb|CBG72823.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 389

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 52/319 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-K 220
           V L  TP    +W P++ S E             V    GLTE  GG+D  A  +  +  
Sbjct: 101 VHLFGTPAQKAEWLPRLCSGE-------------VLGAFGLTEPDGGSDAGATRTTARLD 147

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLK 276
            S   + ++G K F+++  +D  A + +  V GR   G  L+  ++      G       
Sbjct: 148 TSTNEWVINGSKCFITNSGTDITALVTVTAVTGRTPEGKPLISSIIVPSGTPGFTVAAPY 207

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSG 327
           +K+G  ++ T EL F+        D+ V   P E++         + L  LD   +++S 
Sbjct: 208 SKVGWNASDTRELSFA--------DVRV---PAENLLGEEGRGYAQFLRILDEGRIAISA 256

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA     E++ YA+ RH  G  +     ++  IAD  +++ A TA   RL  S+ +
Sbjct: 257 LATGLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RL--SWRD 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A  R       +  A + K +   +A     +A +  GG G++ E  +AR +R+S    +
Sbjct: 310 AAYRLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KIL 367

Query: 443 LLGSGNAMVLDVLNLLEKG 461
            +G G + V  +L   E G
Sbjct: 368 EIGEGTSEVQRMLIARELG 386


>gi|325525847|gb|EGD03572.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 380

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 28/275 (10%)

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241
           Y P        +SVAI    TE   G+D++AI +  ++  D  Y ++G K W   +  + 
Sbjct: 108 YLPEAAKGRTVSSVAI----TEPEAGSDVSAIRTTARRDGDS-YVINGQKSWITWAAQAH 162

Query: 242 AFIMLAQV-EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
             ++ A+  EGR    +  FL+     D    GL   R + K+G   + T ++ F +   
Sbjct: 163 YMLVFARTSEGRGHDGISVFLI-----DTKTPGLKIGRKEVKMGRHGSPTYQVFFEDMRV 217

Query: 294 TFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILID 351
               LLG+     G    MKIL +   S   S  G+ + +L E++ YA+ R   G  + D
Sbjct: 218 AADCLLGE--EGNGFKACMKILDLNRPSVAASSLGLAQAALDESVQYAKDRRQFGKRIGD 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD+A+ I AA AL +      D       + +   +++ + K +   +A   
Sbjct: 276 FQAIQFKLADMAMKIEAARALLYTSTQEIDAG-----DTSRLTLLSSMAKCYVTDIAMEA 330

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA++  G  GY  E  + R  R++  N IL G+
Sbjct: 331 ALEAVQVHGSYGYSTEYPVERFMRDAKLNQILEGT 365


>gi|120555036|ref|YP_959387.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
 gi|120324885|gb|ABM19200.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 19/265 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG L ++E   G+D+ ++    +   D  Y L+G+K W  + P +  +++ A
Sbjct: 119 PKLVTGEHIGALAMSEPNAGSDVISMKLHARDEGDH-YVLNGNKMWITNGPDAHTYVIYA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + + + G   V   + +    G    +  +K+G R + T EL F +     +   NV  G
Sbjct: 178 KTDPKGGSKGVTAFIVERDYPGFSRHQKLDKLGMRGSNTCELVFQDC---KVPKENVLGG 234

Query: 308 PVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                K+L+  LD   + +SG     M+ ++   + Y R R   G  + +  +++  +AD
Sbjct: 235 VGNGAKVLMSGLDYERLVLSGGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   +  A +  + +A S D  ++  ++AA A +       +  +MA  +  +A++ +GG
Sbjct: 295 MYTWMNTAKSYVYMVAQSADRGETTRKDAAGAIL-------YSAEMATKLALDAIQLLGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GYI E    R  R++    I  G+
Sbjct: 348 NGYINEYPTGRLLRDAKLYEIGAGT 372


>gi|298489400|ref|ZP_07007411.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298155974|gb|EFH97083.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 393

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  ++    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPNVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|284990870|ref|YP_003409424.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284064115|gb|ADB75053.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 37/294 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   TP   + W P + + E             +  G  L+E + G+D AA+  + + +
Sbjct: 100 LATFGTPAQQERWLPAMLAGE-------------LVGGYSLSEPQAGSDAAALACRAEAV 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNK 278
             G        W      +D + + A+  EG  G  CFL P     G   GL + R + K
Sbjct: 147 EGGYRVTGTKSWITHGGRADFYALFARTGEGSRGISCFLAP-----GRVEGLSFGRPEEK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-- 335
           +G  +  T     +N  G  +    +     + + I    LDS  + ++ +   LA+A  
Sbjct: 202 MGLHAIPTT---MANWDGARIEADRLIGAEGQGLSIAFSALDSGRLGIAAVATGLAQAAL 258

Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + YA  R   G  +ID   +   +AD+A  +  A       A+  D A+ R     Y
Sbjct: 259 EAAVDYAHERSTFGRRIIDHQGLGFLLADMAAAVDTAR------ASYLDAARRRDAGRPY 312

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            R  A + K      A  V  +A++ +GG GY  +  + R+ RE+    I  G+
Sbjct: 313 GR-QASVAKLVATDAAMRVTTDAVQVLGGYGYTRDFPVERYMREAKVMQIFEGT 365


>gi|296505766|ref|YP_003667466.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|296326818|gb|ADH09746.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis BMB171]
          Length = 376

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|326384314|ref|ZP_08205995.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196912|gb|EGD54105.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 378

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 26/255 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+  + + + D  Y ++G K W     ++D + + A+  +G  G  CFL
Sbjct: 127 LSEPQAGSDAAALACRAEAVGDD-YRITGEKAWITHGGIADFYNLFARTGDGSKGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP    DG+  GL + R + K+G  +  T    +    G L+          + ++I   
Sbjct: 186 VP----DGT-EGLSFGRPEEKMGLAAVPTTSARYD---GALVPAERRIGAEGQGLQIAFS 237

Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++ +   +A     EA+ YA+ R   G  +ID   +   +AD+A  + +A  
Sbjct: 238 ALDSGRLGIAAVATGIAQAALDEAVAYAKERETFGRKIIDHQGLGFLLADMAAAVDSAR- 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D A+ R     Y+R  A + K      A  V  +A++  GG+GY  +  + 
Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGNGYTRDFRVE 350

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I  G+
Sbjct: 351 RFMREAKITQIFEGT 365


>gi|291562341|emb|CBL41157.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SS3/4]
          Length = 637

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D     +      D  Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTESNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F++     +   N+    
Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+
Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  L +  A   ++      E+A A++       +   +A  V  +A++  GGS
Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+++   + R YR++   +I  G+
Sbjct: 342 GFLKGMEVERAYRDAKITTIYEGT 365


>gi|295663286|ref|XP_002792196.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226279371|gb|EEH34937.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 428

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F++ R  +   P       +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTFETPAIKNKTALRASITGMIQMDSCPVPEANMFPDVEGLKGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I+ AR     R+   G  L    ++++ +AD   D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCINRARSYALERKQFKGNPLAKYQLVQKKLADATTD 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + +++   DE K+  E       M  + K   C  A A      E  GG+   
Sbjct: 336 AAYGTLAAIQVSRLKDEGKAAPE-------MISMIKRQNCDRALAGARTLQEIFGGNAAS 388

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 389 DEYHIGRH 396


>gi|33599601|ref|NP_887161.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567197|emb|CAE31111.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 35/280 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + P++ + E             +     LTE   G+D A++ +   K  D  Y
Sbjct: 102 TPEQQEKYLPRLATGE-------------IMASFALTEPEAGSDAASLRTTAIKDGDA-Y 147

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F++ +P +  F ++A+      G   V   + D    G+ + +   K+G +  
Sbjct: 148 VVNGTKRFITNAPHAGMFTLMARTNPADKGAAGVSAFIVDAGTPGISFGKRDRKMGQKGA 207

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
            T ++ F N       L+G L    G    MK+L   +   + ++ + V++AE     A+
Sbjct: 208 HTCDVIFENVRVPAANLIG-LKEGQGFKTAMKVL---EKGRIHIAAVCVAVAERMLDMAL 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +    +++  +AD   +I AA ++    A   D+    S EA+ A   
Sbjct: 264 RYAAERKQFGQPIGTFQLVQAMLADSKAEIYAARSMVLDAARRRDDKLPNSTEASCA--- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               K +  +M   V   A++  GG+GY+ E +I R YR+
Sbjct: 321 ----KMFASEMCGRVADRAVQIFGGAGYMSEYAIERFYRD 356


>gi|326330442|ref|ZP_08196750.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325951717|gb|EGD43749.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 20/282 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           S E   T   P+ +       GL+E+  G+D AA+  +  +  DG + L+G K W  ++ 
Sbjct: 109 SEELKATYLPPVARGDALFAYGLSEREAGSDTAAMKCRAIRTGDG-WVLNGQKSWITNAS 167

Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            ++ + +LA    +GR G  +   ++E  +  G  +   + K+G + + T EL F +   
Sbjct: 168 AAEYYTVLAVTDPDGRRGANVTAFVVER-NDEGFTFGAPERKLGIKGSPTRELRFDDV-- 224

Query: 297 FLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             + +  +     E +K+ L  LD   +++    V +A+     A+ Y R R   G  + 
Sbjct: 225 -RIPEDRMVGREGEGLKLALQTLDHTRVTIGAQAVGIAQGALDHALDYVRERKQFGKRIA 283

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+ + + AA  + +  A     AKS   +A  +       K +   +A  
Sbjct: 284 DFQGLQFMLADMGMKLEAARNMVYVAA-----AKSERNDADLS-FFGAAAKCFASDVAMQ 337

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           V  ++++ +GG GY  +  + R  R++    I  G+     L
Sbjct: 338 VTTDSVQLLGGCGYTRDFPLERMMRDAKITQIYEGTNQVQRL 379


>gi|119503779|ref|ZP_01625861.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma
           proteobacterium HTCC2080]
 gi|119460287|gb|EAW41380.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma
           proteobacterium HTCC2080]
          Length = 382

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 31/248 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
           +G++E   G+ + A+  +  +  D  Y ++G K W  +   SD   +LA+      G +G
Sbjct: 124 VGMSEPDAGSQVTAVRCRAVEDGDD-YVINGEKLWISNGGYSDFIFLLARFNNDPVGGLG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             LV R  +DG      Y+     K+G  S +T ++ F +     +   N+   P E MK
Sbjct: 183 LILVER--QDG------YETCDIEKMGLNSQSTAQVSFQDV---RVPKTNLMVPPGEAMK 231

Query: 314 -ILIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +LI L  +     +M++   + SL E++ YA+ R   G  +    ++   I ++A  + 
Sbjct: 232 TLLISLSGSRPLVSLMALGVAQASLDESVSYAQDRTQFGKPIAGHQLISAKIGEMATKVE 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L+ +  +  D  + RS+      + A ++K++  +MA  V++EA++  GG+G  +E
Sbjct: 292 AGKLLALKALSQIDRGE-RSD------LCAAMSKWFGTQMACEVVSEALQIHGGNGITKE 344

Query: 428 RSIARHYR 435
             +   YR
Sbjct: 345 YPVEYMYR 352


>gi|116050496|ref|YP_790685.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585717|gb|ABJ11732.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 375

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 30/282 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ + S+     LTE + G+D + + ++ ++  D  Y L+G K F++S      +++  V
Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                G+ G   F+VP         G    R+++K+G  ++ T +L F++        LG
Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  +V   R +   A  YA  R   G  +I+   + 
Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +          A S  E        A + K +  +MA  V + A+
Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG GY+++  + R YR+     I  G+ +   L ++  L
Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIVRSL 375


>gi|262376460|ref|ZP_06069689.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308599|gb|EEY89733.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 399

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 115 FGSEEQKQKYLPKLATGEYIGCFGLTEPDYGSDPGSMITRAKKVEGG-YRLTGAKMWITN 173

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 174 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 231

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 232 VFVPEENAFPEVRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 285

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA    ++ R     DE  +  E  +       + K   C
Sbjct: 286 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 338

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 339 GKALDIARLARDMMGGNGISDEFGVARH 366


>gi|206970311|ref|ZP_03231264.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228955590|ref|ZP_04117591.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228961606|ref|ZP_04123215.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051013|ref|ZP_04194561.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229072809|ref|ZP_04206008.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|229082556|ref|ZP_04215019.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|229112756|ref|ZP_04242288.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130591|ref|ZP_04259547.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229147882|ref|ZP_04276223.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|229153505|ref|ZP_04281683.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|206734888|gb|EDZ52057.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228630109|gb|EEK86760.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228635532|gb|EEK92021.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228652930|gb|EEL08812.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228670590|gb|EEL25902.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228700988|gb|EEL53511.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228710300|gb|EEL62275.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228722322|gb|EEL73719.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228798088|gb|EEM45092.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804093|gb|EEM50711.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|195111940|ref|XP_002000534.1| GI22465 [Drosophila mojavensis]
 gi|193917128|gb|EDW15995.1| GI22465 [Drosophila mojavensis]
          Length = 407

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 120/265 (45%), Gaps = 19/265 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D +A ++  +  + G Y L+G K W  +S  +   I+ A ++  +    +  
Sbjct: 148 LSEPGSGSDASAASTTAKLNAGGDYLLNGTKAWISNSKEASGGIIFATIDKSLKHKGITA 207

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
            L + +  GL   + ++K+G  +++T +L         S   G   G   ++   ++  +
Sbjct: 208 FLTEKNVPGLAIAKNESKMGMCASSTCQLTLDDVCVPQSQVLGSPGGGFRIAMESLDCGR 267

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I    A  S    + +L  A+ YA +R   G  L    ++++ +AD+AL +  A  L+
Sbjct: 268 IGI----AAQSTGIAQAALELALDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLT 323

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D   S ++EAA A++ A  T  +C         + ++ +GG GY  +     +
Sbjct: 324 WRAAWLKDNGMSITKEAAMAKLHASETATYCAH-------QCIQILGGMGYTTDLPAEMY 376

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           YR +    I  G+     + + N +
Sbjct: 377 YRNARVTEIYEGTSEIQRIVIANCV 401


>gi|228936627|ref|ZP_04099421.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823062|gb|EEM68900.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|198429737|ref|XP_002129400.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Ciona intestinalis]
          Length = 421

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 161 FALSEPGNGSDAGAASTTARDDGD-CWVLNGTKSWITNSYEASAAVVFATTDKSKKHKGI 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301
             F+VP   E     GL   + ++K+G R ++T  L F +             FGF +  
Sbjct: 220 SAFIVPMPTE-----GLSLGKKEDKLGIRGSSTANLIFDDCKIPKENLVGESGFGFKIAM 274

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  G        I + S  + ++  + SL  AI YA  R   G  +     ++  ++D
Sbjct: 275 STLDAGR-------IGIASQALGIA--QASLDCAIAYADDRKAFGAPISKLQSIQFKLSD 325

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL I +A  L++R A   D   + ++EAA A++ A  T  +          +A++ +GG
Sbjct: 326 MALKIESARLLTWRAAKLKDAGMNFTKEAAMAKLAASETATFASH-------QAIQILGG 378

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ +    RHYR++    I  G+
Sbjct: 379 MGFVSDMPAERHYRDARITEIYEGT 403


>gi|187479665|ref|YP_787690.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424252|emb|CAJ50805.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 31/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---V 253
             LTE   G+D  AI +   +  D  Y L+G K +++ +P++  F ++A+   E R   +
Sbjct: 122 FALTEPDAGSDAMAIRTTATRDGDH-YILNGTKRYITNAPIAGLFSVMARTAPERRADSI 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
            CFLV    E G+P G+   R   K+G     T ++ F N       LLG+    +G   
Sbjct: 181 SCFLV----EAGTP-GITLGRPDKKMGQAGALTCDVVFDNCRVPASALLGEQE-GSGFRT 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            M++L   D   + ++ + V +A+     A  YA+ R   G  + +  +++  +AD   +
Sbjct: 235 AMRVL---DKGRLHIAALCVGIAQRLIRDATRYAQDRQQFGKPIAEFQLVQAMLADSQAE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   D  ++ + EAA A       K +  +M   V   A++  GG+GY+
Sbjct: 292 CYAARCMVLDAARKRDRGENTTMEAACA-------KMFATEMVGRVADRAVQIHGGAGYM 344

Query: 426 EERSIARHYRESPANSILLGS 446
            E ++ R YR+     I  G+
Sbjct: 345 AEYAVERFYRDVRLFRIFEGT 365


>gi|49481208|ref|YP_039335.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|196036517|ref|ZP_03103912.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|218906521|ref|YP_002454355.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|300117856|ref|ZP_07055623.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|49332764|gb|AAT63410.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|195990850|gb|EDX54823.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|218535888|gb|ACK88286.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|298724720|gb|EFI65395.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 376

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|42784518|ref|NP_981765.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|222098814|ref|YP_002532872.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus Q1]
 gi|42740450|gb|AAS44373.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|221242873|gb|ACM15583.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus Q1]
 gi|324329292|gb|ADY24552.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 376

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|227485688|ref|ZP_03916004.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236360|gb|EEI86375.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 641

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 18/268 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE+  G+D A  T     ++   Y L+G K F++ +P +D +++ A 
Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLNGDHYILNGKKIFITNAPKADTYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    +K+G RS++T EL F N     +   N+    
Sbjct: 172 TTPGIGTHGISAFIVEKEFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +   I +  LD   + ++   + + +     A+ YA+ R   G  +         +AD+
Sbjct: 229 GQGFAIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGMPIAHLQRNTFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  + +  A   +  +  S EAA A+ +A         +A  +  EA++  GGS
Sbjct: 289 ATYLRGARLMIYSAAELKENHERYSAEAAMAKQVA-------SDLAMKITTEAVQLYGGS 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G+I+   + R +R++    I  G+   M
Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369


>gi|71907972|ref|YP_285559.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71847593|gb|AAZ47089.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 378

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D AAI +  ++++ G Y L+G K W  ++ ++   ++ A+ +   G   +
Sbjct: 121 FALTEPAAGSDSAAIRTSAKRVAGG-YELTGSKIWISNASLASFMVVFAKTDPAAGHKGI 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + +    GL       K+G R+  T E+ F   F   + + N      E   I +  
Sbjct: 180 SAFIVERESAGLSVGEPLGKLGQRAAPTCEVFFDQVF---VPEENRLGAEGEGFSIAMRT 236

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            D +   V+   + L      E++ YA  R   G  LID  V+   +AD+ + + A+  L
Sbjct: 237 FDQSRPMVAAFGLGLTQRCIDESLAYACERQSMGKRLIDHQVIAHRLADMRIRLEASRLL 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +++ A   D+    + +A+ A+        W          EA++  GG GY  E  + +
Sbjct: 297 TYQSAWLADQGLRNTSQASIAKAFTSDAAMWAAT-------EAIQIFGGMGYSTEYPVEK 349

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 350 LFRDAKVLQIYEGT 363


>gi|163943030|ref|YP_001647914.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163865227|gb|ABY46286.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 376

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|315445940|ref|YP_004078819.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264243|gb|ADU00985.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 387

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 36/303 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A MV    T    K W PK+ S +                   LTE   G+D +A+ ++ 
Sbjct: 95  AWMVDSFGTEEQRKLWVPKLASMD-------------AIASYCLTEPGAGSDASALRTKA 141

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDGSPNGLCYQ 273
            +  D  Y L G K F+S +  SD +I++A+   +G  G   F+VP+        GL + 
Sbjct: 142 VRSGDE-YVLDGVKQFISGAGTSDVYIVMARTGSDGPKGISAFVVPK-----ETPGLSFG 195

Query: 274 RLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
             + K+G  +  T ++            L G     TG    MK L    ++ A  S+ G
Sbjct: 196 TDEVKMGWNAQPTRQVILEGARVPADALLGGPDGEGTGFGIAMKGLNGGRINIAACSLGG 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +  + + Y   R   GG L+D+P ++  +AD+A  +  + AL +R A + D      
Sbjct: 256 AQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLADMATALETSRALLWRAATALDNDHPDR 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E      +  + K +       V  +A++  GG GY+ E  + +  R+   + IL G+ 
Sbjct: 316 VE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRVHRILEGTN 369

Query: 448 NAM 450
             M
Sbjct: 370 EIM 372


>gi|257057813|ref|YP_003135645.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587685|gb|ACU98818.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 614

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 52/302 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----- 251
           LTE   G+D+ A  ++  K  DG + L G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHLEGVKRFITSGDQDMTENIMHLVLARPEGPGIEP 223

Query: 252 -----RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296
                 +  FLVP+ L D      G  NG+    ++ K+G + + T EL F        G
Sbjct: 224 KPGTKGLSLFLVPKFLFDTNTGELGERNGVFVTGVEEKMGLKVSTTCELTFGQHGTPAKG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP- 353
           +LLG+  V  G  +  +++ Y  +     +++ +      A+ YA+ R V G  L  Q  
Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLTRQTD 340

Query: 354 ------------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
                             +M++A A+    +   TA SF+      E  + S + A    
Sbjct: 341 KTAPRVTITHHPDVRRSLMMQKAYAEGLRAVYLYTA-SFQDQVWTQEGDAESLDLAERVN 399

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ PI K    + A   + ++++ +GGSG++++  I ++ R+S  +S+  G+     +D
Sbjct: 400 DLLLPIVKGVGSERASEQLIQSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQSMD 459

Query: 454 VL 455
             
Sbjct: 460 FF 461


>gi|325000306|ref|ZP_08121418.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 589

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 32/327 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +  +   + L+E + G+ +A IT++ +   DG Y ++G K ++S    +       +
Sbjct: 159 PMLEGRMHGTMCLSEPQAGSSLADITTRAEPAPDGTYRVTGTKMWISGGDHELGENIVHL 218

Query: 245 MLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +LA+V G       +  FLVP++L DG  N +    + +K+G R      L F  + G  
Sbjct: 219 VLAKVPGGPAGVRGISLFLVPKILPDGRRNDVALAGVNHKMGYRGTVNTLLAFGESGG-A 277

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR----VSLAEAIHYARRR---HVSGGILID 351
           +G L  + G       L+  ++ +   +G          +++ YAR R     +G     
Sbjct: 278 VGHLVGAEGQGLAAMFLMMNEARVGVGAGAAALACTGYLKSLDYARSRPQGRPAGEKDPS 337

Query: 352 QPVM--------KRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYA--RIMAPIT 400
            P++        +R +         A AL        DE ++  + E A+     + PI 
Sbjct: 338 SPMVPIVRHADVRRMLLAQKSYAEGALALVLYCGRLVDEERTGPDPEEAHLLLETLTPIA 397

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LL 458
           K W  +      A A++  GG GY  E  + +HYR++  N+I  G+      D+L   ++
Sbjct: 398 KSWPSQWGLEANALAIQVQGGYGYSREYDVEQHYRDNRLNAIHEGTHGIQAADLLGRKVV 457

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVIT 485
             G   F  L + +   +G +G    T
Sbjct: 458 MAGGAGFVALRNRIADTIGRAGADPAT 484


>gi|324999635|ref|ZP_08120747.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 612

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 47/289 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQDDGTWHIEGVKRFITSAEQDFTENIMHLVLARPEGAKQGT 223

Query: 253 --VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLG 300
             +  FLVP+        E G  NG     +++K+G +++ T EL F    +   G+LLG
Sbjct: 224 KGLSLFLVPKFHFDTQTGESGERNGAFVTNVEHKMGLKASTTCELTFGAHGTPAVGWLLG 283

Query: 301 DLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---DQPVM 355
           D  V  G  +  +++ Y  +     ++  +      A+ +A+ R V G  L    D+   
Sbjct: 284 D--VHDGIAQMFQVIEYARMMVGTKAIGTLSAGYLTALEFAKER-VQGADLTQMTDKTAP 340

Query: 356 KRAIA---DI--ALDIAAATALSFRLANSF-----------DEAKSRSEEAAYA--RIMA 397
           +  I    D+  +L +  A A   R   ++           DE    S E A     ++ 
Sbjct: 341 RVTITHHPDVRRSLMLQKAYAEGMRAVYTYTATFQDRIRLGDEGGGVSTELAEKVNDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           PI K    + A   + ++++ +GGSG++++ +I ++ R++  +S+  G+
Sbjct: 401 PIVKGVGSERATEQLVQSLQTLGGSGFLQDYAIEQYIRDAKIDSLYEGT 449


>gi|291303470|ref|YP_003514748.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572690|gb|ADD45655.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 391

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A + ++ +K  D        +W  ++ +S  + + A  +   G   +   
Sbjct: 131 LSEPEAGSDVAGMKTKAEKDGDAFVLNGAKRWITNAGVSRYYTVFAVTDPGKGAHGISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320
           + D    G+ +   ++K+G + + T E+ F N     +G   +     E  KI +  LD 
Sbjct: 191 VVDSEDEGVSFGAPEHKLGIKGSPTREVYFDNV---RVGADRLVGAENEGFKIAMRTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++++   V + +     A  Y + R   G  + D   ++  +AD A+ ++AA  L++ 
Sbjct: 248 TRVTIAAQAVGIGQGALDYAAGYVKERQQFGRAVADFQGVQFMVADAAMKLSAARQLTYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     AKS  E+       A   K +   +A  V  +A++ +GG GY  +  + R  R
Sbjct: 308 AA-----AKSEREDDDLTFYGAS-AKCFASDVAMEVTTDAVQLLGGYGYTSDYPVERMMR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKITQIYEGT 372


>gi|254419280|ref|ZP_05033004.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185457|gb|EDX80433.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 389

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 45/294 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + + PK+ S E+              +G L ++E   G+D+ ++ ++  +  D  
Sbjct: 112 TPEQKRKYLPKLISGEH--------------VGALAMSEAGSGSDVMSMRTRADRKGD-R 156

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC--FLVPRLLEDGSPNGLCYQRLKNKI 279
           Y L+G K W  ++P +D  ++ A+ +   G  GC  FL+ + ++     G    +  +K+
Sbjct: 157 YVLNGTKFWITNAPHADTLVVYAKSDPDAGSKGCTAFLIEKGMK-----GFSVSKKLDKM 211

Query: 280 GNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G R + T EL F        N  G + G   V    ++  + ++    A   +  M+ +L
Sbjct: 212 GMRGSDTAELVFEDCEVPEENIMGPVGGGAGVLMSGLDYERAVL----AAGPLGIMQAAL 267

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D   +   +AA 
Sbjct: 268 DVVLPYVRDRQQFGRPIGSFQLMQGKVADMYVALNSARAYVYSVARACDAGLTTRYDAAG 327

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A ++A        + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 328 AILLA-------SENAVKVTLEAVQALGGAGYTKEWPVERLVRDAKLYDIGAGT 374


>gi|17506239|ref|NP_491871.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis
           elegans]
 gi|14573994|gb|AAK68275.1|AC006625_7 Acyl coa dehydrogenase protein 1, isoform a, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 427

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 34/273 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           ++E   G+D  A+ +  ++  D  + +SG K W  +S  +  F++ A  +       + C
Sbjct: 167 ISESGAGSDAFALKTIAKRDGDH-FLISGTKMWITNSGEAQVFVVFANADPSQKYKGITC 225

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R     S +GL   + ++K+G R+++T ++ F N       +LG+        +  
Sbjct: 226 FIVER-----SADGLTVDKEEDKLGIRASSTCQVHFDNVRVHKSAILGEYG------KGY 274

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K  I  L++  +++    + LA+      I Y ++R   G  LID   ++  IA    +I
Sbjct: 275 KYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQIAQARTEI 334

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A   +       EAA A++ A        ++A +  A+ ++ +GG G+ +
Sbjct: 335 EAARLLVYNAARMKEYGIPYVREAAMAKLFAS-------QVATSTSAQCVKWLGGVGFTK 387

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           E    + YR++    I  G+ N  +  +  L++
Sbjct: 388 EFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLID 420


>gi|296170671|ref|ZP_06852246.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894660|gb|EFG74394.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 608

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP+ L D      G  NG+    L++K+G +S+ T E+ F  T     G+L+
Sbjct: 224 TKGLSLFYVPKFLFDPETFELGPRNGVFATGLEHKMGIKSSPTCEMTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           GD++         +E  ++ I + +A    +G   +LA    +A+ R V G         
Sbjct: 284 GDVHNGIAQMFTVIEHARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--- 395
                 ++  P ++R++           AL    A   D+      SR++     R+   
Sbjct: 339 TAPRVTIMHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDTVAQHVSRADHEMAHRVDDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K    + A  V+ E+++ +GGSG++++  + ++ R++  +S+  G+     LD  
Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDAKIDSLYEGTTAIQALDF- 457

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                        F  + +D G + + V   +  +I  C E
Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATIDGCDE 486


>gi|291279846|ref|YP_003496681.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
 gi|290754548|dbj|BAI80925.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
          Length = 592

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 33/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L+G K F+++   +D F + A+V+      FLV
Sbjct: 147 LTEPGSGSDALGAKATATLSEDGKYYILNGTKQFITNAGFADLFTVFAKVDKEHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
            R  E     G+     + K+G + ++T ++  +N       LLG+  +  G      IL
Sbjct: 207 ERTFE-----GVELGPEEKKMGIKGSSTRQVILNNCKVPVENLLGE--IGKGHKIAFNIL 259

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  + +LAE I YA  R   G  +     +K  ++D+   I A+ +
Sbjct: 260 NVGRFKLGAAVTGAA--KFALAEGIKYANERKQFGRQISSFGAIKEKVSDMVAHIFASES 317

Query: 372 LSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPAVIAEAMEC 418
             +RLA   D+  +  +++A             YA I   ITK +  ++   V+ E ++ 
Sbjct: 318 AIYRLAGLIDDRIATIDKSAENYYELYQKAIEEYA-IECSITKVFPSEVLAKVVDEVVQI 376

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG G+I+E    R YR+   N I  G+
Sbjct: 377 FGGYGFIQEYPAERFYRDERINRIFEGT 404


>gi|301097310|ref|XP_002897750.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Phytophthora infestans T30-4]
 gi|262106771|gb|EEY64823.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Phytophthora infestans T30-4]
          Length = 423

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 38/289 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P   T+      LTE   G+D  A+ ++    +DG  Y L+G K W  +   +D F+++A
Sbjct: 152 PRLSTNTVGSFCLTEAESGSDAFALKTKADVSADGSHYTLNGEKMWISNVAHADVFLVMA 211

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            V+  +G     CF+V R    G+P GL +   + K+G        L  S+T   +L D+
Sbjct: 212 TVDPSLGYKGITCFIVER----GTP-GLSFGPPEKKLG--------LNASSTCSVILEDV 258

Query: 303 NVSTGPV-----EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
            +    V     +   I I  L+   + ++  ++ +AE     A+ Y   R   G  + D
Sbjct: 259 KIPKEKVLGKVGQGYAIAIGQLNEGRIGIAAQQLGIAEGAYRHAMPYLFERKQFGRAIGD 318

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              M+   A++AL++A+A  L +  A      K    E   A  MA   K    ++A   
Sbjct: 319 FQAMQHQYAELALELASARLLVYNAAR----LKDAGHEFVKASCMA---KLHASRVAERT 371

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            ++ +E +GG G+ ++    + YR+    +I  G+ N  +  +  L+++
Sbjct: 372 SSKCIELLGGVGFSKQLMAEKFYRDCKVGTIYGGTSNVQLSTIARLVKQ 420


>gi|168183515|ref|ZP_02618179.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf]
 gi|237796654|ref|YP_002864206.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657]
 gi|182673364|gb|EDT85325.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf]
 gi|229263048|gb|ACQ54081.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657]
          Length = 379

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 24/269 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +A  S      D  Y L+G K F+++   +D F++ A  +   G   +
Sbjct: 123 FGLTEPNAGTDASAQQSIAVLKGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGI 181

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G P G    + ++K+G R+++T EL F +       LLG      G    MK 
Sbjct: 182 SAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + AA
Sbjct: 239 L---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      ++ + +AA A++ A  T  +       V  ++++ +GG GY ++  
Sbjct: 296 KYLVYKSAWKKSAGENYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R  R++    I  G+     + + N L
Sbjct: 349 LERMLRDARITEIYEGTSEVQKMVIANNL 377


>gi|322700771|gb|EFY92524.1| glutaryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102]
          Length = 427

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 29/257 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++ S  +      G + LSG K W  +SP++D  ++ A
Sbjct: 154 MAKGKLLGAFGLTEPNHGSDPGSMESVARPHPTKKGYFSLSGAKTWITNSPIADVLLVWA 213

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           +++  G++  FLV R  +D  P  L    +K+K G R++ T  ++          +  D+
Sbjct: 214 KLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDECPVPEANMFPDV 271

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
               GP         L+SA   +S G+  +L + I  AR     R+   G  L    +++
Sbjct: 272 EGLKGPFS------CLNSARYGISMGVMGALEDCIARARTYALERKQFKGNPLAKYQLIQ 325

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD A D A  T  + ++    DE K   E       M  + K   C +A        
Sbjct: 326 KKLADAATDAAYGTLAAIQVGRLKDEGKVTPE-------MISMVKRQNCDIALRNARILQ 378

Query: 417 ECIGGSGYIEERSIARH 433
           E  GG+   +E  I RH
Sbjct: 379 EIFGGNAVSDEYHIGRH 395


>gi|296394805|ref|YP_003659689.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296181952|gb|ADG98858.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 382

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +  ++  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGRLATTARRDGDH-YVINGAKTYITSAVRADYVVTAARTGGEGSAGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            ++ + +  G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LIVVEKTAPGFIVSRALDKMGWRSSDTAELSYTDVRVPAANLVGAENTGFAQIAAAFVAE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A+ + +  +  L  A+ + R R   G  LI +  ++  +A++A  I  A   +  +
Sbjct: 243 RVVLAVQAYASAQRCLDLALQWCRDRSTFGRPLISRQSVQNTLAEMARRIDVAKVYTRHV 302

Query: 377 ANSFDEAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           A   + A S  +    +  +A+  A  T  W       V  +A++  GG GY+ E  I R
Sbjct: 303 A---ERAASGDQDLIAQVCFAKNTAVETGEW-------VANQALQLFGGLGYMAESEIER 352

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
            YR+     + +G G   +L  L
Sbjct: 353 QYRD--MRILGIGGGTTEILTTL 373


>gi|221066398|ref|ZP_03542503.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711421|gb|EED66789.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 606

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 65/344 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDALKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D+A + ++ +   DG Y + G K F++     M+D  +  +LA+V G       +  F+V
Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN-------------TFGFLLG 300
           P+ L  +DGS    N +    +++K+G +++ T  L+F +               G+L+G
Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDGTAASIADSAGPGAVGYLVG 290

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI----- 348
           + N     +E M I++      + + G+ V+      A+ YA+ R     V G +     
Sbjct: 291 EENRG---LEYMFIMMNAARYAVGLQGLAVAERAYQHAVAYAKERVQSRPVDGSVKASAT 347

Query: 349 LIDQPVMKRAIADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +I  P ++R +  +         +A A A ++  A+   + + R     +   M P+ K 
Sbjct: 348 IIHHPDVRRMLMTMRASNEGCRAMATAAAAAYDAAHHHPDVEVRQANQTFYEFMVPLVKG 407

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+
Sbjct: 408 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 451


>gi|88811721|ref|ZP_01126975.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88791112|gb|EAR22225.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 390

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 21/239 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   +TS  QK+  G Y +SG K W   SP++D  ++ A+++G +  F++
Sbjct: 135 FGLTEPDHGSDPGGMTSHAQKVRGG-YRVSGAKSWITHSPIADVLVIWAKLDGEIRGFIL 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R +      GL   +++ K   R++ T ++     F      L V    GP   +    
Sbjct: 194 ERDM-----TGLETPKIEGKFALRASVTGQIHMDEVFVPEANALLVEGLKGPFSCLSKAR 248

Query: 317 YLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           Y    I+  S+         A  Y+  R   G  L    ++++ +AD+  +I      + 
Sbjct: 249 Y---GIIWGSMGAAEFCWQAARRYSLERTQFGRPLAANQLIQKKLADMQTEITLGLQAAL 305

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RL    D  +       +A  M  + K   C  A  +   A +  GG+G ++E  + RH
Sbjct: 306 RLGRLIDADR-------WAPEMVSLLKRNNCGKALEIARTARDIHGGNGIVDEYHVIRH 357


>gi|321313267|ref|YP_004205554.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320019541|gb|ADV94527.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
          Length = 379

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 39/285 (13%)

Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           T +A+G       LTE   G+D  ++ +  ++I D  Y L+G K F+++  ++D +I+ A
Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +       +  F+V +  E     G    + + K+G RS+ T E+ F +        L
Sbjct: 171 VTDPEKKKKGITAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           G+        E  KI +  LD     ++   V +A+     A+ YA+ R   G  + +Q 
Sbjct: 226 GEEG------EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A  I A+  L+++ A          + +A +++MA  T       A  V  
Sbjct: 280 GVAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EA++  GG GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 333 EAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISKML 377


>gi|313891664|ref|ZP_07825271.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E]
 gi|313119942|gb|EFR43127.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E]
          Length = 378

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 19/265 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  A+    QK+ DG Y L+G K F+++  +++  ++    +   G   +
Sbjct: 121 FALTEPGAGSDAGAVACYAQKV-DGGYILNGTKCFITNGSIAEKIVVFTNTKKTGGIRGL 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVED 311
              + D +  G+   + ++K+G R++ T E+ F + F      LG       ++   +E 
Sbjct: 180 TAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFVPESSRLGREGMGFKIAMKTLEK 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++      +SV   + SL  A+ YA +R   G  +    +++  IAD+ +   +A A
Sbjct: 240 SRPVV----GALSVGIAQASLESAVRYAHQRKQFGSKISSFEMVQDMIADMVIKTESARA 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  +     D       +     I +P+ K +   +A  V   +++ +GG+GY +E    
Sbjct: 296 LVQKACWMLD------NDMPSKGIFSPMAKAYASDVAMEVSTISVQVMGGNGYSKENPNE 349

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           ++ R++    I  G+     + + N
Sbjct: 350 KYMRDAKVMQIYEGTNQVQKIVIAN 374


>gi|228917951|ref|ZP_04081487.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228841748|gb|EEM86859.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|226360967|ref|YP_002778745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239452|dbj|BAH49800.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 32/287 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           +  E       P   T   +G +G+TE   G+D+ AI +    I DG  Y ++G K F++
Sbjct: 104 YGTEEQKKTWLPGMATGEILGAIGMTEPGAGSDLEAIKTTA--IRDGDEYVINGSKTFIT 161

Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +  S   I+LA + + + G   V  L+ D    P G    R+ +K+G     T EL F++
Sbjct: 162 NGASADMIVLAVKTDPKAGAKGVALLIVDLRDCP-GFAVGRVLDKVGQHGADTSELSFTD 220

Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  LLG+     G +    +   L     +   M  ++ + + Y + R   G  L 
Sbjct: 221 VRVPVSNLLGEERQGFGQLMAQLVQERLIIGAQASGAMNRAVEDTVAYTKSRQAFGHSLF 280

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSE----EAAYARIMAPITKYW 403
           +         + A ++A    ++   A   D   EA  R E    EAA       + KYW
Sbjct: 281 E-------FQNTAFELAECQTIARTCAVFLDHCIEAHLRGELDPSEAA-------MVKYW 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +   AVI   ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 327 LTEQQCAVIDRCVQLHGGYGYMREYLIARMYEDARVQKIYAGANEVM 373


>gi|156742430|ref|YP_001432559.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233758|gb|ABU58541.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 381

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 27/289 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T   H+ W P   S E                 + +TE   G+D+AAI +   +  D  Y
Sbjct: 104 TSEQHRRWLPGCVSGE-------------CITAIAMTEPGAGSDLAAIRTTALRDGDA-Y 149

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284
            L+G K F+S+  ++D  I+ A+ +   G   V  L+ E G P     +RL+ KIG  + 
Sbjct: 150 VLNGQKTFISNGILNDLVIVAAKTDPDRGAKGVSLLVVERGMPGYERGRRLE-KIGLHAQ 208

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG+       + +      L  A+ +V+    +L + I Y R 
Sbjct: 209 DTAELFFHNVRVPRENLLGEEGQGFRYLMEQLPRERLAIAVGAVAAAETALEQTIRYCRE 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V G  L     ++  +A++A ++        +   + +  +  +E AA A       K
Sbjct: 269 REVFGRPLGALQTVRFTLAELATEVQIGRVFVDQCVLALNRGELTAETAAMA-------K 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +W  ++   V+   ++  GG GY+ E  IAR + ++   +I  G+   M
Sbjct: 322 WWTTELQQRVVGACLQLHGGYGYMREYPIARAFLDARVQTIYGGTTEIM 370


>gi|145594789|ref|YP_001159086.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145304126|gb|ABP54708.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 380

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E +GG+D A +T++   + +G  Y +SG K W   + ++D + +  +  G  G   + 
Sbjct: 126 LSEPQGGSDAAHLTTR--AVPEGEEYIVSGTKAWITHAHVADFYNIFCRTGG-AGARGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL D +  G+  Q  +  +G  ++   ++ F  T      L+G      G       + 
Sbjct: 183 CLLADRNMPGIEPQLAERTMGLHASPVAQVVFDGTRVPAERLIGGEGKGFGIA-----MS 237

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   V LA+A     + YAR R   G  ++D   +   +AD A  I+AA A
Sbjct: 238 ALDSGRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDFQGLGFLLADAATQISAARA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  S EAA A++ A         +A  V  +A++ +GG+GY+ +  + 
Sbjct: 298 LMLAAARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVE 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R+ RE+    I+ G+     L +   L KG
Sbjct: 351 RYMREAKVLQIVEGTNQIQRLVISRALAKG 380


>gi|308177362|ref|YP_003916768.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307744825|emb|CBT75797.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 26/261 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG---RVGC-- 255
           LTE   G+D+ A+ ++  +  D  + +SG K F+ ++   DA ++LA+ +G   R G   
Sbjct: 128 LTEPGAGSDLRAVRTKAVRDGDD-WLISGQKTFIGNAAFGDASLVLARTDGESSRAGAHS 186

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
              F+V R   +G  NG  +    +K+G R++ T EL F     +   L+G++      V
Sbjct: 187 FSLFMVER--SEGYSNGKPF----DKMGLRASDTAELFFDEVRVSATDLVGEVGQGLSYV 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L  A+ + +    S  +A+ + + R   G +L +    +  +AD+  +    
Sbjct: 241 KAQLPQARLALAVAASAICSASFEQALEHTKNRSTFGQVLTEYQNTRFELADLKTEAHVT 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +   R   +F+E +  + +AA  ++       W  + A  +  +A++  GG GYI E  
Sbjct: 301 QSFVDRAVLAFNEGELNASDAAEVKL-------WASESAKKLSDKALQLHGGYGYIMEYP 353

Query: 430 IARHYRESPANSILLGSGNAM 450
           IA+ +  S   +I  G+   M
Sbjct: 354 IAQSFTASRLLTIFGGTSEIM 374


>gi|296392631|ref|YP_003657515.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296179778|gb|ADG96684.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 611

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 56/327 (17%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W   I  + +D T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 146 QKQWCKVIAEQNWDAT-------------MVLTEADAGSDVGAGRTKAVEQPDGTWHIEG 192

Query: 231 HKWFLSSPMS-DAF-----IMLAQVEG-RVGC-----FLVPRL------LEDGSPNGLCY 272
            K F+S   S D F     ++LA+ EG R G      F VP+        E G  NG+  
Sbjct: 193 VKRFISGATSGDLFDNIFHLVLARPEGARAGTKGLSLFFVPKWHYDFEKRERGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             L++K+G +++ T EL F        G+L+G ++     + D+     +   I S + +
Sbjct: 253 TNLEHKMGIKASTTCELAFGQHGIPAVGWLVGGVHDGIAQMFDVIENARMTVGIKSTATL 312

Query: 329 RVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFR 375
                 A+ +A+ R V G               ++  P ++R++ +         AL   
Sbjct: 313 STGYLNALEFAKER-VQGSDFTQMLNKDAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLL 371

Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   D A ++      E+ AY     + PI K +  +   A +A++++  GGSG++++ 
Sbjct: 372 AAAYQDPAVAQRLFGADEDLAYRVNDFLLPIVKGFGSEQGYAHLADSLQIFGGSGFLQDY 431

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
            I ++ R++  +++  G+     LD  
Sbjct: 432 PIEQYIRDAKIDTLYEGTTAIQSLDFF 458


>gi|302381653|ref|YP_003817476.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192281|gb|ADK99852.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 396

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 29/265 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE  GG+D A++ ++  K+ DG Y L+G K W  +
Sbjct: 120 FGNEEQKMRFLPRMAAGELIGCFGLTEADGGSDPASMKTKAVKV-DGGYRLNGGKYWITN 178

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D  I+ A+++  +  F+V R  E     G    ++ +K+  R++ T ++  ++ F 
Sbjct: 179 SPIADLAIVWAKLDDVIRGFIVERGFE-----GFTTGKIGDKLSLRASITGDIGLNDVFV 233

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LL  +    GP         L+ A   +S   +  AE   +A R +V   +L  +P
Sbjct: 234 PEANLLPGVKGLRGPFS------CLNKARYGISWGAMGAAEFCLHATRDYVGERMLFGRP 287

Query: 354 -----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
                ++++ +AD+  +I      ++ L    D         A+      + K   C  A
Sbjct: 288 LSSRQLVQKKLADMQTEIFLGFEGAYALGRLLD-------TGAFVPEAISLMKRNNCGKA 340

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
            A+  EA +  GG+G   E  + RH
Sbjct: 341 LAIAREARDMHGGAGITGELHVMRH 365


>gi|228930351|ref|ZP_04093355.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228949063|ref|ZP_04111335.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810636|gb|EEM56985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228829337|gb|EEM74970.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 381

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|171060874|ref|YP_001793223.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170778319|gb|ACB36458.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 376

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE   G++   + +   +  D  Y L G K F++S    D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSEAGGLKTTAVRDGDH-YVLDGVKQFITSGQHGDVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      S  G    RL++K+G  S+ T ++ F        + LG
Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYTVARLEDKMGQHSSDTAQINFDQCRIPASYRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    L ++   +E  +I I    A  SV   R +   A+ Y++ R   G  + +   ++
Sbjct: 225 EEGQGLKIALSGLEGGRIGI----ASQSVGMARAAFEAALAYSKDRIAFGTAIFNHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I AA  L +  A+  D      +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADMAMQIEAARQLIWHAASLKDAGLPCLKEAAMAKLFAS-------EMAEKVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|268568112|ref|XP_002640162.1| Hypothetical protein CBG12664 [Caenorhabditis briggsae]
 gi|187029266|emb|CAP31609.1| hypothetical protein CBG_12664 [Caenorhabditis briggsae AF16]
          Length = 420

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 125/280 (44%), Gaps = 24/280 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T       L+E   G+D  ++ +  +K  D  + ++G K W  +S  +++ ++ A 
Sbjct: 148 PKSVTGSVGSFALSEVSAGSDAFSLKTVAKKDGDD-FVINGSKMWITNSGHAESLLLFAN 206

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +   G   +   + D    GL   + ++K+G R+++T  + F N       +LG+    
Sbjct: 207 ADVSKGYKGITCFMLDIKTKGLTVGKKEDKLGIRASSTCPIHFDNVRVHKSAILGEFG-- 264

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
               +  K  I  L++  + +    + LA     E I Y ++R   G  +ID   ++  I
Sbjct: 265 ----KGYKYAIECLNAGRIGIGAQMLGLADGCFNETIPYLQQREQFGQRIIDFQGLQHQI 320

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A I  +I AA  L +  A   ++      EAA A++       +  ++A    ++ +E +
Sbjct: 321 AQIRTEIEAARLLVYNAARMKEQGLPFVREAAMAKL-------YASQVATNTTSKCVEWL 373

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GG G+ ++  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 374 GGVGFTKDFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 413


>gi|313106540|ref|ZP_07792768.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879270|gb|EFQ37864.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + L +TE  GG+D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   
Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL +    G    R   K+G  ++ T EL F +       L+G  N     +     
Sbjct: 184 ISLLLVEKGTAGFNVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+M+    +++L E++ +AR R   G  +    V++  +A++A  +  +   ++
Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A      KS  +E + A       K +   +A  +  +A++ +GG GY+ E  + R Y
Sbjct: 304 RQAAKMAVGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356

Query: 435 RESPANSILLGSGNAM 450
           R++   SI  GS   M
Sbjct: 357 RDNRILSIGGGSREIM 372


>gi|302342407|ref|YP_003806936.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639020|gb|ADK84342.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 380

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 39/270 (14%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA------QVEGRVGC 255
           TE   GTD+A   ++  K   G Y ++G K F+++  + D F++ A      +   R   
Sbjct: 125 TEPNAGTDVAGYGTRAVK-DGGDYIINGQKMFITNGTVCDFFLVQAITNPENKRHARFSQ 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
            +VP         G+   ++  K+G RS+ T E+ F         D+ V    +  +   
Sbjct: 184 IIVP-----ADAPGVTRTKIHGKMGIRSSNTAEISFE--------DVRVPQSNLVGVEGR 230

Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIAL 364
              +++ + D+    ++   + L++A       Y+R R V G  L    + ++ +A++A+
Sbjct: 231 GFYQLMHFFDTTRPMIAAQALGLSQACLDTSARYSREREVFGAPLGSFQLTQKKLAEMAI 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I A   L++R     D        AA A+     T  +C         +A+E  GG GY
Sbjct: 291 RIEALRGLTYRACWLIDNGTPDYTLAAMAKYYGGETAVFCAD-------KAVEIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           IEE  + + YR++    +  G+  A ++ +
Sbjct: 344 IEEYPVQKWYRDAKILELYEGTKEAEIMTI 373


>gi|294341460|emb|CAZ89877.1| Isovaleryl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 392

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 127/278 (45%), Gaps = 25/278 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  DG + L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADRRGDG-FVLNGSKMWITNGPDADVLVVYAKTDPAASSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 187 TAFLVEKDFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPADNVLGELN---GGVKVLMSG 243

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   V  M+  +   + Y   R   G  + +  +++  +AD+   + AA +L
Sbjct: 244 LDYERAVLAAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMYTVLQAARSL 303

Query: 373 SFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + +  + D   +  +RS     A ++      WC + A  +  E ++  GG+GYI +  
Sbjct: 304 LYTVGKNLDALGDGHARSVRKDCAAVI-----LWCAEKATWMAGEGIQIFGGNGYINDYP 358

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           + R +R++    I  G+G + +  +L     G  LF Q
Sbjct: 359 LGRLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390


>gi|290961610|ref|YP_003492792.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651136|emb|CBG74257.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 383

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 57/308 (18%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  VA        + W P + + EY              +G  GLTE   G+D   +T++
Sbjct: 95  AKTVAAWGDEEHKRRWLPGLTAGEY--------------VGCFGLTEPGTGSDAGNLTTR 140

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271
             +   G + +SG K F+++   +D  ++ A+     G      FLVP         GL 
Sbjct: 141 AVR-DGGDFVISGTKTFITNGTWADVVLLFARSTDAPGHQGISAFLVPT-----DTPGLR 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAI----M 323
            + +  K+G R   T EL        +L ++ V      GP  + K      SA+    M
Sbjct: 195 RRAIHGKLGLRGQTTAEL--------VLEEVRVPASALLGP--EGKGFTVAMSALAKGRM 244

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           SV+   V +A+A     + YA  R   G  +    +++  I DIA+D+ AA  L++R+A+
Sbjct: 245 SVAAGCVGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELITDIAVDVDAARLLTWRVAD 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  + EA+ A++ A        + A      A++  GG GYI+E    +  R++ 
Sbjct: 305 LVDRGQPFATEASKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDAR 357

Query: 439 ANSILLGS 446
             ++  G+
Sbjct: 358 VMTLYEGT 365


>gi|15806554|ref|NP_295267.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459305|gb|AAF11106.1|AE001998_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 422

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 36/265 (13%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252
           GLTE   G+D   + S  ++  DG + L+G K F++   ++  +++LA+     EG+   
Sbjct: 156 GLTEPGSGSDSGGMFSNAKEQPDGSWILNGSKNFITQGSVAGTYVVLARTDPAREGKGKN 215

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  F+  R        G    R ++K+G RS+ T +L F +       LLG+   +  
Sbjct: 216 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFK 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG-ILIDQPVMKRAIAD 361
            V  M++   LD   + ++ M + L       A  YA  RH  G  I  +Q +  R +AD
Sbjct: 272 DV--MRV---LDGGRVGIAAMGLGLGRGAYEYAARYALGRHQFGKPIAYNQNIAFR-LAD 325

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           I   + AA  L  + A+  D  ++ +   A A++ A +     C        EA++ +GG
Sbjct: 326 IDTKLEAARLLIRKAADLKDAGQNFTVPVARAKLYATVVGVEACD-------EAIQMLGG 378

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GYI+E  + R +R++    I  G+
Sbjct: 379 YGYIKEYPVERMWRDNRLTRIGEGT 403


>gi|319440934|ref|ZP_07990090.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 399

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 17/246 (6%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+        + +TE   G D+A I +   K  +G + L+G K F+S+ +   F ++  
Sbjct: 119 APLCSGEKIGAIAMTEPGAGADLAGIRTTALKNDEGNFVLNGSKTFISNGVQADFTLVVA 178

Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           +    +GR G  +   L+ D    G        K+G ++  T EL F N       +LG+
Sbjct: 179 ITDPSQGRAGVSI---LIVDAETEGFTKTGPLKKVGLKAQDTAELNFENAVVPAENVLGE 235

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G +        +  A+ S++  R +      +++ R   G  L+D    +  +A 
Sbjct: 236 EGAGFGYLRTNLAQERVSIAVGSIATSRRAFDLVYQHSQDRKTFGNRLVDHQAYRWELAK 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I +A +      ++  EAK + E      + A + KY   ++   V+  A++  GG
Sbjct: 296 MATEIQSAQS----FVDAAVEAKVKGE---LDEVTASMAKYLTTELQIKVVNTALQLHGG 348

Query: 422 SGYIEE 427
            G++ E
Sbjct: 349 YGFMME 354


>gi|311271975|ref|XP_001926332.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Sus scrofa]
          Length = 431

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++  K  D  Y ++G K W  S+  +  F+++A V+  +G     C
Sbjct: 175 LSEPSAGSDSFSLKTRADKDGD-YYVINGSKMWITSAEDAGLFLVMANVDPALGYKGITC 233

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R  E     GL   + +NK+G R+++T  +   N     + + N+        K  
Sbjct: 234 FLVDRDTE-----GLRVGKPENKLGIRASSTCPVTLENA---KVPEANIVGQIGHGYKYA 285

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   + LA+      I Y + R   G  + D   ++  +A  A  + AA
Sbjct: 286 IQSLNKGRIGIAAQMLGLAQGCFDLTIPYLKERVQFGKRIFDFQGLQHQVAHTATQLEAA 345

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   +  +   +EA+ A       KY+  ++A     + +E +G  GY ++  
Sbjct: 346 RLLTYNAARLLEAGRPFIKEASMA-------KYYASEVAIQTTNKCIEWMGAVGYTKDYP 398

Query: 430 IARHYRESPANSILLGSGN 448
           + +++R++   +I  G+ N
Sbjct: 399 MEKYFRDAKIGTIYEGTSN 417


>gi|302671840|ref|YP_003831800.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316]
 gi|302396313|gb|ADL35218.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316]
          Length = 386

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 25/271 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD   + ++     DG  + L+G K F+++  ++D +I++A
Sbjct: 113 PLAKGEKLGAFGLTEPMAGTDAQGVQTKAVLSEDGKEWILNGSKCFITNGEVADIYIIIA 172

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +      GR        ++E G+P G  +   +NK+G R ++T EL F +     +  
Sbjct: 173 YTDIVEDKKGRKQKKFSAFIVEKGTP-GFTFGTKENKMGIRGSSTYELIFQDCH---IPA 228

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
            N+     +   I ++ LD   + ++   + +AE      + Y + R   G  +      
Sbjct: 229 ENLLGARGKGFPIAMHTLDGGRIGIAAQALGIAEGALDRTVEYVKERKQFGRAIGAFQNT 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++A    AA  L ++ A++       S EAA A++ A        ++A  V  +A
Sbjct: 289 QFQLANMATQCEAARLLVYQAADAKKNKDVYSVEAAKAKLFA-------AEVAMDVTTKA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GYI E  + R  R++    I  G+
Sbjct: 342 VQLHGGYGYIREYEVERMMRDAKITEIYEGT 372


>gi|258645297|ref|ZP_05732766.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470]
 gi|260402647|gb|EEW96194.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470]
          Length = 378

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 33/272 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  A++ + +K+  G Y L+G K F++ +P++D   + A      G   +
Sbjct: 121 FALTEPGAGSDAGAVSCRAEKVEGG-YILNGTKCFITNAPIADKITLFANTREGGGIRGL 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLG--DLNV 304
              L D    G+   + ++K+G R++AT E+ F + F            GF++    L +
Sbjct: 180 TVFLVDADTKGISIGKEEDKMGIRASATAEVIFEDCFVPDSARVGKEGRGFMIAMQTLQM 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           S  PV           A +SV   + ++  A+ Y+  R   G  +    ++++ IAD+ +
Sbjct: 240 SR-PV----------VAAISVGIAQAAIEAAVAYSHHRKQFGVKIATFEMVQQMIADMVM 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA  L+++         ++  +   A + + ++K +    A  V   A++ +GG+GY
Sbjct: 289 KTEAARILTYK------ACVAQMNKDKKAGLYSAMSKCFASDTAMEVTTTAVQVMGGNGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             E  + ++ R++    I  G+     L + N
Sbjct: 343 SRENPVEKYMRDAKIMQIYEGTNQVQRLVIAN 374


>gi|85712005|ref|ZP_01043059.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
 gi|85694191|gb|EAQ32135.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
          Length = 385

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 26/262 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  +K  D  Y L+G K F+S   S D  +++A+  G  G   +  
Sbjct: 124 LTEPGSGSDAASLRTSAKKEGDE-YVLNGSKMFISGAGSTDVMVVMART-GEAGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
            +      G+ Y + ++K+G  +  T  + F +       LLGD        E  K  ++
Sbjct: 182 FVVPADAKGISYGKKEDKMGWNAQPTRLVTFEDVRIPAKNLLGDEG------EGFKFAMM 235

Query: 317 YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD      A+ SV   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  
Sbjct: 236 GLDGGRINIAVCSVGTAQAALETASAYMHERSQFGKPLAAFQALQFKLADMATELVAARQ 295

Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +    A+  D     ++   A A+  A    +  C        EA++  GG GYI+E  +
Sbjct: 296 MVRLAASKVDNNDPDKTTYCAMAKRFATDIGFQVCN-------EALQIHGGYGYIKEYPL 348

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            RH R+   + IL G+   M L
Sbjct: 349 ERHVRDVRVHQILEGTNEVMRL 370


>gi|114566326|ref|YP_753480.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337261|gb|ABI68109.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 380

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 128/276 (46%), Gaps = 35/276 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   I ++  K  D  Y L+G K F+S+   +  + +LA ++ ++G   +  
Sbjct: 124 LTEPGAGSDAGGIATRCVKSGDE-YILNGSKQFISNGGTAGVYTVLATLDKKMGTKGMCA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------- 313
            + D +  G+   + ++K+G R++ T E+ F         D+ V   P +++        
Sbjct: 183 FIVDRNTPGITVGKTEDKLGIRTSNTTEVIFE--------DVRV---PAKNLLGTEGQGF 231

Query: 314 --ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             I+  LD +  S++ M   +++A     + Y++ R   G  +     ++  +AD+A+ I
Sbjct: 232 YIIMKTLDLSRASIAAMATGVSQACLDASLEYSKLRTQFGKPICSFQAIQFKLADMAMRI 291

Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A+  L    ++  D    R S+ A+ A+  A  T  +C         EA++  GG GY 
Sbjct: 292 EASRLLYLEASSLQDMNVPRFSKAASLAKAYAGDTAVFCA-------TEAVQVFGGYGYT 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  + ++YR++    I  G+G    L +   L +G
Sbjct: 345 KDYPVEKYYRDAKIFQIYEGTGEVQRLVIAGDLLRG 380


>gi|328876781|gb|EGG25144.1| putative acyl-CoA oxidase [Dictyostelium fasciculatum]
          Length = 433

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 27/257 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCF 256
            GLTE   G+D + +  + +K+ +G + L+G K W  ++P +D  I+ A+     ++  F
Sbjct: 175 FGLTEPLAGSDASGLLCEARKVDNG-WILNGEKRWIGNAPFADIIIVWARDTESKKIKGF 233

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD-------LNVSTGPV 309
           +V    E G+P GL  + + NKI  R      + F      L+ D        + ++GP 
Sbjct: 234 IV----EKGTP-GLNVETINNKISLRMVQNGHIYFKEC---LISDDQRLPNANDFNSGPG 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           + +  L  + +A +S+     +      Y + R   G  L    +++  +  +  ++ A 
Sbjct: 286 KCL-FLTRIMAAWISLGVAANAYESCFKYVQSRKQFGTPLSKFQLIQERLVKMLGNLQAM 344

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T +  R+++ FD+ K      +Y +I   + K +C      +++ A EC+GG+G + +  
Sbjct: 345 TLMCLRVSHLFDQQK-----LSYGQI--GLLKAYCTSHGREIVSLARECVGGNGIVTDYG 397

Query: 430 IARHYRESPANSILLGS 446
           +AR + +  A     GS
Sbjct: 398 VARSFVDMEAIHTFEGS 414


>gi|319763240|ref|YP_004127177.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117801|gb|ADV00290.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 388

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254
           LTE   G+D A+I ++ + +  G Y ++G K F+S   S   ++L    G        + 
Sbjct: 124 LTEPGSGSDAASIKTRAELVG-GEYVINGGKAFISGAGSTHVLVLMARTGDAQSGAAGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP  L      G+ Y + + K+G  S  T ++ F N     +   N+     E  KI
Sbjct: 183 AFAVPADLP-----GIHYGKKEEKMGWNSQPTRQISFDNV---RIPAQNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +LA A  Y + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  RLA S  +A +R      A     + K +       V+ EA++  GG GYI E 
Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + R  R++  + IL G+   M
Sbjct: 349 PLERLLRDARVHQILEGTNEIM 370


>gi|332306391|ref|YP_004434242.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173720|gb|AEE22974.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 600

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 38/298 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+  + ++  K  DG Y L+G K F+S+   D       I++A++    EG 
Sbjct: 164 LTESHCGSDLGMLKTKAVKNDDGSYSLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGT 223

Query: 253 VGC--FLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----D 301
            G   F+VP+       E+   N +    +++K+G + +AT  + F    G+L+G     
Sbjct: 224 KGISLFVVPKFNVSADGENEDRNAVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTENRG 283

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQP 353
           LN     +   +I   L+    S +  + +LA A    + R + G          +I  P
Sbjct: 284 LNCMFTFMNSARIGTGLEGLASSETAFQGALAYAKDRVQFRSMKGVQNPDGPADPIIVHP 343

Query: 354 VMKR--------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            ++R        A  + AL I A   +   L  S DEA  +  EA  A  + PI K +  
Sbjct: 344 DVRRMLLTQKAFAEGNRALAIYAMKLVDITLY-SKDEAAKQISEAKLA-FLTPIVKAFLT 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + A    +  M+  GG G+I+E  + +  R++   ++  G+     +D+L     G+N
Sbjct: 402 ETAQESTSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLARKIVGSN 459


>gi|294632956|ref|ZP_06711515.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830737|gb|EFF89087.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 392

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 29/261 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM + +      LTE   G+D + + +     ++G + +SG K F++ +P++D F+  A+
Sbjct: 118 PMAEGACLASFALTEPEAGSDPSGMRTTATWSAEG-WSISGQKRFITNAPLADLFVTFAR 176

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           V     +G++  FLVP         GL       K+G     T ++ F       +G   
Sbjct: 177 VRGTEADGKIAVFLVP-----AGSAGLTVGPKDRKMGQEGATTADVYFDAV---RVGHDA 228

Query: 304 VSTGPVED--MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           + +G VE      +  L    + +S +   LA     E++ Y+ +    G    D+ +++
Sbjct: 229 LISGEVETGFRAAMTVLARGRVHISALATGLAERALDESVRYSAQNRQGGVPTGDRQLVQ 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+    + A  AL+   A  + +   R       RI     K +C + A      A+
Sbjct: 289 AMLAEQQALVLAGKALARDTARKYLDGSDR-------RIAPSAAKLFCTEAAGRAADLAV 341

Query: 417 ECIGGSGYIEERSIARHYRES 437
           +  GGSGY+ E ++ R YR++
Sbjct: 342 QVHGGSGYMREVAVERIYRDA 362


>gi|212534364|ref|XP_002147338.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
 gi|210069737|gb|EEA23827.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
          Length = 431

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E       +
Sbjct: 165 LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     LLG+LN        +K+L
Sbjct: 224 SAFIVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 277

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R      +    +++  +AD+   +AA+
Sbjct: 278 MEGLDLERLVLSAGPLGIMQSALDLVLPYTHTRKQFNTPIAHNQLIQGKLADMYTKLAAS 337

Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A ++  A S DE+ +       R+++ A A + A      C         +A++ +GG+
Sbjct: 338 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 390

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI E    R  R++    I  G+
Sbjct: 391 GYINEIPAGRLLRDAKLYEIGAGT 414


>gi|126640779|ref|YP_001083763.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 375

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 91  FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 149

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G   GL    +  K+G R++ T E+   N
Sbjct: 150 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 207

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 208 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 261

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C
Sbjct: 262 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 314

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 315 GKALDIARMARDMMGGNGISDEFGVARH 342


>gi|118591104|ref|ZP_01548503.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118436180|gb|EAV42822.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 391

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKMWITNGPSADTMIIYAKTDPEAGPKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L + S  G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKSFPGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGQVGKGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A  +V  M+ ++   I Y   R   G  +    +++  +AD+ + + A  +
Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYIHEREQFGQPIGTFQLVQGKVADMYVTMNATKS 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A        + A  +  +A++ +GG+GYI E    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYA-------AENATKLALDAIQLLGGNGYINEYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|116694436|ref|YP_728647.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113528935|emb|CAJ95282.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 400

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 40/256 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252
             LTE   G+D  ++ +  ++  D  Y L+G K F++ +P++D F + A+          
Sbjct: 122 FALTEPEAGSDATSLQTTARQDGDH-YVLNGSKCFITNAPIADLFTVFARTNPDTPGAHG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FL+ R    G+P GL     + K+G   +   ++         L D  V    +   
Sbjct: 181 ISAFLIER----GTP-GLSTSEPERKMGQHGSPVGDV--------YLKDCRVPASAIVGG 227

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           K  +   +A+ +++  R++LA            E + YA +R   G  + D  ++++ IA
Sbjct: 228 KPNVGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGKPIADYQLVQQMIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   ++ AA AL    A   D  +  + EA+       + K +  +M+  V   A++  G
Sbjct: 288 DSNTELHAARALVLDTARKRDAGEDVTMEAS-------MCKLFASEMSGRVADRAVQVFG 340

Query: 421 GSGYIEERSIARHYRE 436
           GSGY+      R YR+
Sbjct: 341 GSGYMARTVAERFYRD 356


>gi|262279186|ref|ZP_06056971.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259537|gb|EEY78270.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 607

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 71/366 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 165 LSEPQAGSSLADIRTRAIKTEDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283

Query: 292 -SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +   G L+G+    L      + + +I + L +A +  +G       A+ YA+ R V G
Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKNR-VQG 338

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388
                         LI    ++R +      ++ A AL    A      +S ++A+ R++
Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQ 398

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 399 ANQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458

Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LD+L     L +G +   L E++ +T+ Q       K    L+D      +   L +
Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTITQ------AKAEPSLKDHADHLAQKWQLIQ 512

Query: 503 FLTEKI 508
            +TEK+
Sbjct: 513 NVTEKL 518


>gi|229181591|ref|ZP_04308916.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228601787|gb|EEK59283.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 381

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|256825977|ref|YP_003149937.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256689370|gb|ACV07172.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 391

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 33/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISD-------GIYCLSGHK-WFLSSPMSDAFIMLAQV---E 250
           L+E   G+D+A++ ++     D         Y +SG K W   +  +D +   A+    +
Sbjct: 127 LSEPAAGSDVASMRTKAVGSGDVDETGRSEEYAISGGKMWISHAGHADFYTTFARTGEND 186

Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           G+ + CF VP     G   GL +   + K+G  S+   E+ +       +   N+   P 
Sbjct: 187 GKGISCFHVP-----GDAPGLTFAEPERKMGLHSDTVREVLYDKV---TVPGENLIGTPG 238

Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
           + + I L  LDS  + ++     LA+A     + YA  R   G  + +   ++  +AD+ 
Sbjct: 239 KGLGIALAALDSGRLGIAAASTGLAQAATDLALKYAAERQQFGKPIAENQGLQFMLADMQ 298

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              +AA A     A   D  K  S EAA A++ A  T       A  V  +A++ +GG G
Sbjct: 299 AQTSAARATYLHAARLKDAGKKFSREAAIAKLFASDT-------AMKVTTDAIQVLGGYG 351

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  +    R++R++    I  G+
Sbjct: 352 YTTDFPAERYFRDAKITQIFEGT 374


>gi|309791007|ref|ZP_07685547.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308226980|gb|EFO80668.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 379

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 24/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+    +     L+E   G+D AA  +   +  D  Y ++G K W  +   +D  I++A 
Sbjct: 113 PLASGKMLGAFSLSEPGAGSDAAAQKTTAVRDGDH-YVINGVKNWVTNGDHADTIILMAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVS 305
            +   G   +   L D    G    +++NK+G RS  + ++   EF      LLG+    
Sbjct: 172 TDPSKGVKGISAFLVDTKEPGCRVVKVENKLGIRSAHSSQMAYDEFRVPAWRLLGEEG-- 229

Query: 306 TGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI +  L++  + ++   + +A     EA+ Y + R   G  + +   +  A+
Sbjct: 230 ----QGFKIAMTILNAGRIGIAAQALGIAQGAYEEALAYTKVREQFGKPIHEFQAVGFAL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  I AA  L++  A   D+     ++AA A++ A  T  W          +A++  
Sbjct: 286 ADMATRIKAARLLTYDAAWRKDQGLDYGKDAAMAKVFASETAMWTA-------TKALQLH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G +GY +E  I R +R++    I  G+
Sbjct: 339 GSNGYSKEYPIERFFRDAKITEIYEGT 365


>gi|111023745|ref|YP_706717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823275|gb|ABG98559.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 34/278 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G    
Sbjct: 124 IAMTEPGTGSDLQGIKTRAVRDGDD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGF 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             L+ +    G    R  +KIG ++  T EL F++              GFL    N+  
Sbjct: 183 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNL-- 240

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I      A+++ + M  +L   I Y R R   G  +      +  +A++A + 
Sbjct: 241 -PQERLSI------AVVAAAAMESALDMTIQYCRDRKAFGKSIGSFQNTRFVLAELATEA 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   L  +     ++ K   +EAA A       K+W  +    +I   ++  GG GY++
Sbjct: 294 TAVRVLVDKFIELLNDEKLSVQEAAMA-------KWWTTEAQVRLIDRCLQLHGGYGYMK 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E  IA+ Y +S   +I  G+   M      ++ +G NL
Sbjct: 347 EYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 380


>gi|110679512|ref|YP_682519.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109455628|gb|ABG31833.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           MA    G  +S       M+    +  +   W PK+ + E                   L
Sbjct: 78  MACPSVGSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCTME-------------TVFSYCL 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D AA+ ++ Q+ + G Y L+G K F+S    SD ++ + +  G  G   +  +
Sbjct: 125 TEPGSGSDAAALRTRAQRSNSG-YVLNGTKAFISGGGYSDVYLTMVRT-GDAGPKGISAV 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTG 307
           L +    GL +  L+NK+G R+  T +++F +               F + +  L+    
Sbjct: 183 LIENGREGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGQEGQGFAYAMAGLDGGR- 241

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     L+ A  ++ G + +L  A+ Y   R   G  L     ++  +AD+ + + 
Sbjct: 242 ----------LNIAASALGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQ 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     + A+  D       +AA A     + K +   +A  V  +A++  GG GY+ +
Sbjct: 292 TARIFLRQAASKLD------AKAADATKYCAMAKLYVTDVAFDVANQALQLHGGYGYLAD 345

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             I +  R+   + IL G+   M
Sbjct: 346 YGIEKIVRDLRVHQILEGTNEVM 368


>gi|264676627|ref|YP_003276533.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207139|gb|ACY31237.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 376

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP     G+P G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKTAGKKGMSAFIVP----TGNP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ Y++ R   G  + +   + 
Sbjct: 225 AEGEGYRIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+ A  I AA  L +  A+  D      +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG G + +  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|322701299|gb|EFY93049.1| isovaleryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa
           102]
          Length = 401

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 34/270 (12%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  +K+ DG + L+G K W  +
Sbjct: 146 NGSPEQKKKYLPGLIAGTKIGALAMSESGSGSDVVSMRTSAKKV-DGGHLLNGSKMWITN 204

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   L +   +G    R  +K+G R + T EL F N F 
Sbjct: 205 GPDADLIVVYAKTEPDKGSKGITAFLVETKTDGFSCARKLDKMGMRGSNTGELMFDNVFV 264

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350
               ++G +N   G V  +   + L+  ++S      M+ +L  A+ ++ +R   G  + 
Sbjct: 265 PEENVVGSVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQFGSPIA 321

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAP 409
              +++  +AD+   + AA A ++  A   DE    R+++ A A + A      C     
Sbjct: 322 HNQLVQGKLADMYTKLQAARAYTYATAKQVDEQGVIRTQDCAGAILYAAERATEC----- 376

Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRE 436
                A++CI   GG GY+EE   +R  RE
Sbjct: 377 -----ALDCIQLLGGMGYVEEMPASRLLRE 401


>gi|307293156|ref|ZP_07573002.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881222|gb|EFN12438.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 380

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 38/387 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+AR    +     A  P    WD+    P     +R +   G   SI+       V +
Sbjct: 14  QEMARRFTAD-----AITPFAAEWDEKHIFP--RETIRAAAELGFG-SIY-------VSE 58

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +A  I   RL     +EA     PS ++   +  M +  + + +  K    +Y P+   P
Sbjct: 59  EAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMASWMIDR-FGGKAVKDKYLPS-MVP 116

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M++        LTE   G+D AA+ ++  K  D  Y ++G K F+S    +   ++    
Sbjct: 117 MERIGSYC---LTEAGSGSDAAALKTRAVKDGDH-YVVTGSKQFISGGGENEIYVVMVRT 172

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G  G   +  L+ +    G+ +   + K+G  S  T ++ F    G  +   N+  G  E
Sbjct: 173 GDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFD---GVRVPVENLVGGEGE 229

Query: 311 DMKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +I ++ LD   +     S+ G +  + EA+ Y + R   G  + D    +  +AD+  
Sbjct: 230 GFRIAMMGLDGGRLNIGACSLGGAQRCIDEALTYTKDRKQFGQSIADFQNTQFMLADMET 289

Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++ AA  L +  A    E A  ++  AA A+ +A  T         +V+  A++  GG G
Sbjct: 290 ELQAARTLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVDRALQLHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ +  + R +R+   +SIL G+   M
Sbjct: 343 YLMDYPVERFWRDLRVHSILEGTNQVM 369


>gi|307728271|ref|YP_003905495.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307582806|gb|ADN56204.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 376

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S   ++  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTAIREGD-TYVLNGVKQFITSGKNANVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP         G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DSQGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  + AA  L +  A   D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLAEMATQLEAARQLIWHAAALKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|183982003|ref|YP_001850294.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M]
 gi|183175329|gb|ACC40439.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M]
          Length = 386

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 48/317 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + +  ++AL T  +  + W PK  + E+          T++A    +TE   G
Sbjct: 93  GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGEF---------ITAIA----MTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   G      L+ +   
Sbjct: 139 SDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEKGAQGFSLLVVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313
            G    R  +KIG  +  T EL FS+               F +L+ +L     P E + 
Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLMQNL-----PQERIS 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I      AIM+ +GM   L + + Y + R   G  + +    +  +A++A +      + 
Sbjct: 253 I------AIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELATEATMVRIMV 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   + K  +E+AA A       K++  +   ++    ++  GG GY+ E  +AR 
Sbjct: 307 DEFIELHLDGKLTAEQAAMA-------KWYSTEKQVSLNDRCLQLHGGYGYMREYPVARA 359

Query: 434 YRESPANSILLGSGNAM 450
           Y +S   +I  G+   M
Sbjct: 360 YLDSRVQTIYGGTTEIM 376


>gi|170759663|ref|YP_001788519.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406652|gb|ACA55063.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 379

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 26/270 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSIAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   +LE G P G    + ++K+G R+++T EL F +       LLG      G    MK
Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L   D   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + A
Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A      ++ + +AA A++ A  T  +       V  ++++ +GG GY ++ 
Sbjct: 295 AKYLVYKSAWKKSAGENYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + + N L
Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377


>gi|121607236|ref|YP_995043.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121551876|gb|ABM56025.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 386

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 46/317 (14%)

Query: 154 PSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           PSV   + +AL+     +  D+A +   +E+ P     +   +V +   LTE   G+D A
Sbjct: 86  PSVDLGTRLALLAWGSMILSDFASEEIKQEFLPR----VASGAVKLSFSLTEPGSGSDAA 141

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS--PMSDAFIMLAQVE------GRVGCFLVPRLLED 264
           ++ ++ +   DG + L+G K F S    +++  I+ A+ +        +  FLVP    +
Sbjct: 142 SLQTRARADGDG-WVLNGQKLFSSGADALNNHIIVAARTDPDAPRHKGISLFLVP----N 196

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMKILI- 316
            SP GL  +RL + +G +     E+ F        +L+G++N      T  +E  +I + 
Sbjct: 197 TSP-GLTIRRL-DTVGRKIVGLCEIFFDAVRIPRRYLIGEVNHGWHYITRHLERERITLA 254

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             YL SA       R +LA+AI YA  R   G  + D  V+   +AD+A ++ AA  +  
Sbjct: 255 ANYLGSA-------RSALADAIAYACERRQFGRPIGDFQVIAHMLADMATEVEAARWMVA 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A  +D     +++A+ A       K +  +M      + M+ + G GY  +  + R++
Sbjct: 308 MAAWRYDMQLPCAKQASMA-------KLFVSEMLVRATTQGMQILAGHGYTTDHDMQRYW 360

Query: 435 RESPANSILLGSGNAMV 451
           R+  A +  +G G + +
Sbjct: 361 RD--ARNCTVGGGTSQI 375


>gi|62550674|gb|AAX88796.1| short-chain acyl-CoA dehydrogenase [Equus caballus]
          Length = 211

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    
Sbjct: 13  ISAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGF 64

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+A     ++YA  R   G  L     ++  +AD+AL +
Sbjct: 65  KIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALAL 124

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K  ++EAA A++ A        + A A+  +A++ +GG GY+ 
Sbjct: 125 ESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 177

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 178 EMPAERHYRDARITEIYEGT 197


>gi|93006061|ref|YP_580498.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393739|gb|ABE75014.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 384

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y ++G K +++ +P +  F ++A+ +      G + 
Sbjct: 124 LTEPDSGSDAASLKTTAIKDGD-TYIINGTKRYITNAPEAGVFTVMARTDPQNKRSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            F+V    E  +P G+   ++  K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV----ESDTP-GITLGKIDKKMGQKGAHTCDVIFDNCIVPADALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A  S       L +A+HYA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQFGQPIANFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ++    +   DE K    E++ A++ A        +M   V   A++  GG+GYI +  
Sbjct: 297 KSMVLDASRLRDEGKDVVTESSCAKMFA-------TEMCGRVADRAVQIHGGAGYIADYG 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|146275645|ref|YP_001165805.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322336|gb|ABP64279.1| acyl-CoA dehydrogenase domain protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 394

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 15/238 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + +  +K+ DG Y LSG K W  ++P++D F++ A+ +   G  + 
Sbjct: 137 FGLTEPDAGSDPGGMRTTARKV-DGGYVLSGSKTWISNAPIADVFVIWAKSDAHDGG-IR 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++NK+  R++ T  +   + F     LL ++    GP   +   
Sbjct: 195 GFVLEKGM-KGLSAPKIENKVSLRASITGMVVMDDVFVPDDALLPNVQGLKGPFGCLNRA 253

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y  S   S+       A A  Y   RH  G  L    + ++ +AD+  DI      S R
Sbjct: 254 RYGIS-WGSLGAAEFCFAAARQYGLDRHQFGRPLAATQLFQKKLADMMTDITLGLHASLR 312

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +    D       E A+A  M  I K      A  +   A +  GG+G   E  + RH
Sbjct: 313 VGRLMD-------EGAFAPEMISIVKRNNVGKALDIARIARDMHGGNGISGEYQVIRH 363


>gi|119479533|ref|XP_001259795.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri
           NRRL 181]
 gi|119407949|gb|EAW17898.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri
           NRRL 181]
          Length = 427

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 18/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 162 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGI 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     LLG+LN      + +++L
Sbjct: 221 SAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENLLGELN------KGVRVL 274

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   ++A+
Sbjct: 275 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 334

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++  A   D + +  E +   +  A    Y   + A     +A++ +GG+GYI E  
Sbjct: 335 RSYTYATARHIDNSAATGEVSIRTQDCAGAILY-SAERATECALDAIQLMGGNGYINEIP 393

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 394 AGRLLRDAKLYEIGAGT 410


>gi|327441463|dbj|BAK17828.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 27/280 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           F  E       P   +  +IG   LTE   G+D  ++ ++   + DG  Y L G K F++
Sbjct: 100 FGNEEQRKKYVPKLASGESIGAFCLTEPSAGSDAGSLKTRA--VRDGEHYVLDGAKVFIT 157

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +   +D +I+ A  +   G   +   + + +  GL   + + K+G   + TV+L F N  
Sbjct: 158 NGGEADVYIVFASTDPEAGSRGISAFIVEKNTPGLIIGKDERKMGLHGSRTVQLTFENMR 217

Query: 295 --FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                LLG +       +  KI L  LD   + ++   + +AEA   A   +    I   
Sbjct: 218 VPAENLLGQVG------DGFKIALANLDVGRIGIAAQSLGIAEAALEAATAYAKERIQFG 271

Query: 352 QPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           +P+ ++      +AD+A  + A+  L +R AN   E  S  +EA+ A++ A  T      
Sbjct: 272 KPIAQQQGVGFKLADMATAVEASKLLVYRAANMRSEGLSCGKEASMAKLFASQT-----A 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M  A+  EA++ +GG GY E+  + R++R++    I  G+
Sbjct: 327 MDTAI--EAVQILGGYGYTEDYPVERYFRDAKVTQIYEGT 364


>gi|264676620|ref|YP_003276526.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207132|gb|ACY31230.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 395

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G+K W  + P +D  ++ A+ E  +G   V
Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPEMGARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG LN+        K+L
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENILGGLNMGA------KVL 243

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D   +  +     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 304 RSFAYTVAKNLDLLGT--DHVRQIRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 362 LGRLWRDAKLYEIGAGT 378


>gi|296137162|ref|YP_003644404.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797284|gb|ADG32074.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 392

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 27/279 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  DG + L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADRRGDG-FVLNGSKMWITNGPDADVLVVYAKTDPAASSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G L G + V    ++ 
Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPAENVLGHLNGGVKVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   V  M+  +   + Y   R   G  + +  +++  +AD+   + AA +
Sbjct: 247 ERAVL----AAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMYTVLQAARS 302

Query: 372 LSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           L + +  + D   +  +RS     A ++      WC + A  +  E ++  GG+GYI + 
Sbjct: 303 LLYTVGKNLDALGDGHARSVRKDCAAVI-----LWCAEKATWMAGEGIQIFGGNGYINDY 357

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            + R +R++    I  G+G + +  +L     G  LF Q
Sbjct: 358 PLGRLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390


>gi|295402212|ref|ZP_06812169.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112297|ref|YP_003990613.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294975707|gb|EFG51328.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217398|gb|ADP76002.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 402

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 28/269 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K        LTE   G+D+A+I++   +  D  Y L+G K W     ++D FI+ A 
Sbjct: 115 PQAKGEKIGAFALTEPNAGSDVASISTTAVRDGDD-YILNGQKTWISLCDIADHFIVFAY 173

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +       +  F+V R +      G   + +K K+G R+  T EL F N     +   N
Sbjct: 174 TDKSKKHRGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 225

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD+   +V+   V L  A     I Y   R   G  +    ++++
Sbjct: 226 LLGEEGEGFKIAMSALDNGRFTVAAGAVGLIMACLEASIKYCHERKTFGKEIGRHQLVQQ 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA +   +  +  L +++    ++ +  + EA+ A+ +A       C  A     +A++
Sbjct: 286 MIAKMEAGLQISRLLVYKVGFLKNQGRRTTREASLAKWIA-------CDFANQAADDAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G  GY  E  + R+ R S A  I  G+
Sbjct: 339 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 367


>gi|84498080|ref|ZP_00996877.1| FadE19 [Janibacter sp. HTCC2649]
 gi|84381580|gb|EAP97463.1| FadE19 [Janibacter sp. HTCC2649]
          Length = 395

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL- 257
           G GLTE   G+D  A  ++  +   G + + G K F+++  +D    +  V  R G    
Sbjct: 126 GFGLTEPDAGSDAGATRTKAAR-DGGEWVVDGAKAFITNSGTD-ITSVVTVTARTGTDTD 183

Query: 258 ----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
               +  ++      G   +   +K+G   + T  L F    G  + + N+     +  K
Sbjct: 184 GNAQISAIMIPSGTTGFTVEPAYDKLGWHISDTHGLTFQ---GVRVPEANLLGEEGQGFK 240

Query: 314 -ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  LD   +++S + V +A+A+      YA+ R   G  +     +   IAD+A+ + 
Sbjct: 241 QFLKTLDDGRIAISALAVGMAQAMLDLSTDYAKTRTAFGRPIGANQGVSFQIADLAVSVE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+++ A   DE ++        +  A I K +  + A      A++  GG+G++EE
Sbjct: 301 AARLLTYKAAWLKDELEAGRRSVKEVKQAASIAKLYSSEAAVTATRIAVQIFGGNGFMEE 360

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
             +AR YR+     + +G G + V  +L
Sbjct: 361 YPVARFYRD--GKILEIGEGTSEVQRML 386


>gi|254695350|ref|ZP_05157178.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|261215723|ref|ZP_05930004.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|260917330|gb|EEX84191.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 384

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG- 254
           LTE   G+D A++ +    + DG  Y L+G K F++ +P++D F ++A+    V+G  G 
Sbjct: 124 LTEPDAGSDAASLKTTA--VRDGNFYILNGTKRFITNAPIADIFTVMARTAADVKGADGI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G   
Sbjct: 182 SAFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKT 235

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK+L    L  A +S       LA+ + +A  R   G  + D  +++  +AD    I A
Sbjct: 236 AMKVLDKGRLHIAALSTGAAERMLADTLAHALDRKQFGKPIADFQLIQAMLADSKAQIYA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E 
Sbjct: 296 AKCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEY 348

Query: 429 SIARHYRE 436
           +I R YR+
Sbjct: 349 AIERFYRD 356


>gi|303319953|ref|XP_003069976.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240109662|gb|EER27831.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 430

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + S  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N        +K+L+    L+  ++S      M+ +L   + Y   R     
Sbjct: 261 PKENILGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +A + A ++  A   D + +  E              +  + 
Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|160898376|ref|YP_001563958.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363960|gb|ABX35573.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 381

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 24/291 (8%)

Query: 170 VHKDW-APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-- 223
           +H D  AP +  F  +       P   T   IG + LTE   G+D+ A+ ++ ++ S+  
Sbjct: 89  IHSDMVAPYLWNFGTQVQKDRWLPRMATGELIGAIALTEPGAGSDLKAVRTRARRKSESE 148

Query: 224 -GIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y L+G K F+++ ++    ++LA  E  +G   +   + +    GL       KIG 
Sbjct: 149 GGGYVLNGQKTFITNGVNAGLMVVLASTEPDLGARGLSLFVVEEGMKGLGKGPALRKIGQ 208

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVED---MKILIYLDSAIMSVSGMRVSLAEA 335
            S  T EL F         LLG  N +   V      + L     A  S  GM   L EA
Sbjct: 209 HSQDTCELFFDELHLPADHLLGRENAAFEHVTQELAQERLAIALRAAASTEGM---LDEA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             + R R V G  ++D    +   AD    +A  T L   L    D+  +R  E +   +
Sbjct: 266 AEFVRNRKVFGRRVLDYQNTRFKFADA---LAKTTMLRVFL----DDCLARHMEGSLDSV 318

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A + K    ++   V+ E ++  GG GY+ E  I R + ++ A  I  GS
Sbjct: 319 TAAMAKLNATELQGQVLDELLQLHGGYGYMAEYGIGRAWADARALRIFGGS 369


>gi|259416027|ref|ZP_05739947.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259347466|gb|EEW59243.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 385

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 42/278 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P  ++  AI    LTE + G+D+A  T    +  D  Y L+G K W  +  ++D + + A
Sbjct: 113 PKTRSGAAIAAFALTEPQSGSDVANSTMTAVRDGDD-YVLNGEKTWISNGGIADVYTLFA 171

Query: 248 QV------EGRVGCFLVPRL--------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +       +G     + P L        LE  +P+ L   R  +         V +  S 
Sbjct: 172 RTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLATLRFTD---------VRIPASA 222

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILID 351
             G       ++      M +L    S + + + G  R +L EA+     RHV G  L D
Sbjct: 223 MIGAPGQGFRIA------MSVLDVFRSTVAAAALGFGRRALDEALRRVTDRHVQGAPLFD 276

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPA 410
             +++  IAD+ALD+ AA  L +R A + D   +R + EAA A       K +  + A  
Sbjct: 277 LQMVQGHIADMALDVDAAALLVYRAAWTKDSGAARVTREAAMA-------KLFSTEAAQV 329

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           VI +A++  GG G      + + YRE  A  I  G+ +
Sbjct: 330 VIDKAVQLFGGEGVRSGAMVEKLYREIRALRIYEGASD 367


>gi|289425895|ref|ZP_06427647.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187]
 gi|289427857|ref|ZP_06429561.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165]
 gi|295131736|ref|YP_003582399.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Propionibacterium acnes SK137]
 gi|289153671|gb|EFD02380.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187]
 gi|289158740|gb|EFD06940.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165]
 gi|291376151|gb|ADE00006.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Propionibacterium acnes SK137]
 gi|313771550|gb|EFS37516.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL074PA1]
 gi|313808615|gb|EFS47075.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA2]
 gi|313811949|gb|EFS49663.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA1]
 gi|313819041|gb|EFS56755.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA2]
 gi|313821682|gb|EFS59396.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA1]
 gi|313823818|gb|EFS61532.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA2]
 gi|313826921|gb|EFS64635.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA1]
 gi|313832381|gb|EFS70095.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL007PA1]
 gi|313834186|gb|EFS71900.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL056PA1]
 gi|314926157|gb|EFS89988.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA3]
 gi|314960996|gb|EFT05097.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA2]
 gi|314975048|gb|EFT19143.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA1]
 gi|314977459|gb|EFT21554.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL045PA1]
 gi|314979047|gb|EFT23141.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA2]
 gi|314985836|gb|EFT29928.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA1]
 gi|314985975|gb|EFT30067.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA2]
 gi|314989281|gb|EFT33372.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA3]
 gi|315081392|gb|EFT53368.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL078PA1]
 gi|315084968|gb|EFT56944.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA2]
 gi|315087499|gb|EFT59475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA3]
 gi|315089593|gb|EFT61569.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA1]
 gi|315096911|gb|EFT68887.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL038PA1]
 gi|327332978|gb|EGE74710.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA2]
 gi|327333970|gb|EGE75685.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA3]
 gi|327449121|gb|EGE95775.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA2]
 gi|328757723|gb|EGF71339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL020PA1]
 gi|332676601|gb|AEE73417.1| acyl-CoA dehydrogenase [Propionibacterium acnes 266]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|212551027|ref|YP_002309344.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549265|dbj|BAG83933.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 569

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 131/306 (42%), Gaps = 42/306 (13%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLS 229
           HK + P++ + E               + + LTE   G+D+ A+  +         + L+
Sbjct: 158 HKQFIPRVCAGE--------------TLSMDLTEPDAGSDLQAVALKATYDEKKDCWRLN 203

Query: 230 GHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++  +D  ++LA+ E G      +   + D    G+  +R++NK+G + + T E
Sbjct: 204 GVKRFITNGDADIHLVLARSEEGTKDGRGLSMFIYDKKDGGVDVRRIENKMGIKGSPTCE 263

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH 343
           L + N    L G      G ++   ++  ++ A + +      L+EA     I YAR R 
Sbjct: 264 LTYKNAKAQLCGKRKY--GLIK--YVMSLMNGARLGIMAQATGLSEAAYREAIVYARERK 319

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--------------SRSEE 389
             G  +I+ P +   I++I   + A+ ++ +  A   D  K               + E 
Sbjct: 320 QFGKTIIEFPAVYEMISNIKAKLYASRSILYETARFVDIYKILEEIAKERPLNDAEKLEL 379

Query: 390 AAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             Y R+     P+ K    + A     + ++  GGSG++++ +  R YR++   SI  G+
Sbjct: 380 KKYKRLSDAFTPLGKAMNTEYANQNTYDCIQIHGGSGFMKDYTCERLYRDARITSIYEGT 439

Query: 447 GNAMVL 452
               V+
Sbjct: 440 TQLQVV 445


>gi|89901589|ref|YP_524060.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89346326|gb|ABD70529.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 383

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 48/281 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---G 254
           +G++E  GG+D+AA+ +  +K  D  Y ++G K W  +   +D   +LA   EG V    
Sbjct: 123 IGVSEVGGGSDVAALKTTAKKDGDD-YLINGSKMWITNGMQADWCCLLANTSEGSVHKNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302
             ++ RL    SP G+  Q++ +KIG  S+ T +L F N              GF+    
Sbjct: 182 SLIMVRL---DSP-GVTRQKI-HKIGMDSSDTAQLFFDNVRVPQRNLIGQEGMGFMF--- 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGILIDQPVMKRA 358
                     ++L + +  +   +G   SL     + I Y R+R   G  ++   V+   
Sbjct: 234 ----------QMLQFQEERLYGAAGCLRSLDRLIDQTIDYTRQRQTFGKPILHNQVVHFR 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  ++ A  AL++R   S+   K  +  A+ A++ A        +++  V    ++ 
Sbjct: 284 LAELRTEVEALRALTYRAVESYISGKDVTRLASMAKLKAG-------RLSREVADSCLQY 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            GG GY  +  I++ YR+S   SI  G  + ++L ++  LE
Sbjct: 337 WGGMGYTRDNPISQAYRDSRLISI-GGGADEIMLGIICKLE 376


>gi|53725603|ref|YP_103644.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|67643911|ref|ZP_00442654.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
 gi|121600521|ref|YP_992186.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385346|ref|YP_001028631.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126449936|ref|YP_001081467.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|126453011|ref|YP_001067460.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|134280085|ref|ZP_01766796.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|166998257|ref|ZP_02264117.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
 gi|167817165|ref|ZP_02448845.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167825577|ref|ZP_02457048.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167895645|ref|ZP_02483047.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           7894]
 gi|167904038|ref|ZP_02491243.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167912294|ref|ZP_02499385.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|167920253|ref|ZP_02507344.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           BCC215]
 gi|217420906|ref|ZP_03452411.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226194177|ref|ZP_03789776.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237813587|ref|YP_002898038.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
           MSHR346]
 gi|242317700|ref|ZP_04816716.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|254175546|ref|ZP_04882206.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|254180842|ref|ZP_04887440.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|254191681|ref|ZP_04898184.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254202338|ref|ZP_04908701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|254207672|ref|ZP_04914022.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|254356425|ref|ZP_04972701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
           2002721280]
 gi|52429026|gb|AAU49619.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|121229331|gb|ABM51849.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124293366|gb|ABN02635.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126226653|gb|ABN90193.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|126242806|gb|ABO05899.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|134248092|gb|EBA48175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|147746585|gb|EDK53662.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|147751566|gb|EDK58633.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|148025422|gb|EDK83576.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
           2002721280]
 gi|157939352|gb|EDO95022.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696590|gb|EDP86560.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|184211381|gb|EDU08424.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|217396318|gb|EEC36335.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225933642|gb|EEH29630.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504311|gb|ACQ96629.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
           MSHR346]
 gi|238525376|gb|EEP88804.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
 gi|242140939|gb|EES27341.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|243065337|gb|EES47523.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
          Length = 395

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348
               +L  +    GP         L+SA   ++   +  AE+  H AR+    R   G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|126440657|ref|YP_001060196.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126220150|gb|ABN83656.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 395

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348
               +L  +    GP         L+SA   ++   +  AE+  H AR+    R   G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|322419624|ref|YP_004198847.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320126011|gb|ADW13571.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 592

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 147/356 (41%), Gaps = 40/356 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +     +DG  Y L+G K F ++  +++ + + A+V+      FLV
Sbjct: 147 LTEPDSGSDALGAKASAILSADGSHYVLNGTKQFTTNGSIANLYTVFAKVDREHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R +E     G+     + K+G + ++T ++   N       +LG++        ++  +
Sbjct: 207 ERTME-----GVSVGPEEQKLGIKGSSTTQVILDNVRVPVANVLGEIGKGHKIAFNVLNI 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                        + +LA+ + YA  R   G  +     +K  +AD+A  I A+ +L +R
Sbjct: 262 GRFKLGAAVTGSAKFALADGVKYAVLRKQFGRPICSFGAIKEKLADMAAGIFASESLVYR 321

Query: 376 LA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           LA               N +D  +   EE A   +   I K +C +M   V  E ++  G
Sbjct: 322 LAGLIDDRLATIPKETPNYYDAYQKGIEEYA---MECAIAKVFCSEMLADVADEVVQIHG 378

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE-QDLGSS 479
           G G+I+E    R+YR+   N I  G+      ++  LL  G  L   L   +  Q     
Sbjct: 379 GYGFIQEYPAERYYRDERINRIFEGTN-----EINRLLIPGILLTRSLKGEIPLQREAMK 433

Query: 480 GKKVITI-----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
               +T      L DS+    E   L+      + +A SAA  Y+A + D  +V L
Sbjct: 434 ALDALTTPSFGELDDSVPFAAEKALLSGLKQLFLVVAGSAAQKYQAQIKDEQEVLL 489


>gi|254509736|ref|ZP_05121803.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533447|gb|EEE36435.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 409

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D AA+ ++ +KI DG Y L+G K W  ++P++D F++ A+    +G++  
Sbjct: 151 FGLTEADAGSDPAAMKTRAEKI-DGGYRLTGSKMWISNAPIADVFVVWAKSDAHDGKIRG 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++     D    GL   +++NK+  R++ T E+           LL  +    GP    
Sbjct: 210 FVL-----DKGTKGLSAPKIENKLSLRTSITGEIVLDGVEVDEAALLPHVQGLKGP---- 260

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +A R++       ++P     + +R +AD+  +I+
Sbjct: 261 --FGCLNRARYGISWGVMGSAECCWHAARQYGLDRKQFNRPLAQTQLFQRKLADMQTEIS 318

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    D+A++  E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 319 LGLQASLRVGRLLDQAEAAPE-------MISIIKRNNCGKALDIARMARDMHGGNGISLE 371

Query: 428 RSIARH 433
             + RH
Sbjct: 372 FHVVRH 377


>gi|56697074|ref|YP_167437.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678811|gb|AAV95477.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 380

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ +K ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAEKSNEG-YVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              +EDG+P GL +  L++K+G +S  T +++F         D  V  G +  ++   + 
Sbjct: 183 --YVEDGTP-GLSFGALEDKMGWKSQPTAQVQFD--------DCKVPAGNLVGVEGDGF- 230

Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             A+M + G R+++A              + Y   R   G  +     ++  +AD+ +++
Sbjct: 231 KYAMMGLDGGRLNIASCSLGAAQTALNMTLQYMGERKAFGKSIDQFQALQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     + A   D   +++ +A     MA   K +  +    V+ + ++  GG GY+ 
Sbjct: 291 QAARTFLRQAAWKLD---NKTPDATKFCAMA---KKFVTETGSKVVDQCLQLHGGYGYLA 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  I +  R+   + IL G+   M
Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368


>gi|323452208|gb|EGB08083.1| hypothetical protein AURANDRAFT_71689 [Aureococcus anophagefferens]
          Length = 1636

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 43/302 (14%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252
            LTE   G+D+A + ++     DG Y ++G K F+S     M+D  +  +LA++ G     
Sbjct: 1185 LTEPACGSDLAQVATKAVPNGDGSYKITGTKIFISCGDHDMTDNVLHCVLARLPGAPEGT 1244

Query: 253  --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
              +  FLVP+ L  +DG+    N     R+++K+G   ++T E+ F  + G+L+G  N  
Sbjct: 1245 KGISLFLVPKHLVGDDGAVGDFNKTNIGRIEDKMGCHGSSTCEINFDESAGWLIGSENKG 1304

Query: 306  TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------RRHV------SGGILI 350
               +        L +A+  V+   ++    + YA+         R++V      +   +I
Sbjct: 1305 LNHMFTFINTSRLGTAMQGVAAAELAFQNGLPYAKDRLAMRALDRKNVDREPDKAADPII 1364

Query: 351  DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---------IMAPITK 401
              P ++R +           ++ F  A   DE +  +E    A+          + PI K
Sbjct: 1365 AHPDVRRMLLTQKAVAEGGRSMVFECALIVDEMQLATEAGDTAKYEALDDRLGFLTPILK 1424

Query: 402  YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LL 458
             +  +M        ++  GG GYI+     +  R++    +  G+     LD+L    LL
Sbjct: 1425 GYLTEMGVEAANLGIQIFGGHGYIKSNKQEQVVRDARIAPVWEGTTQIQALDLLGRKVLL 1484

Query: 459  EK 460
            +K
Sbjct: 1485 QK 1486


>gi|118464348|ref|YP_882491.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254775754|ref|ZP_05217270.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118165635|gb|ABK66532.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 609

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP+ L D      G  NG+    +++K+G +S+ T EL F  T     G+L+
Sbjct: 224 TKGLSLFYVPKYLFDPETFELGPRNGVFVTGVEHKMGIKSSPTCELTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           GD++         +E  ++ I + +A    +G   +LA    +A+ R V G         
Sbjct: 284 GDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALS-FRLANSFDEAKSRSEEAAYA------RI 395
                 +I  P ++R++           AL  +  A+  D+   R   A +        +
Sbjct: 339 TAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRVSGADHDMAHRVDDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K    + A  V+ E+++ +GGSG++++  + ++ R+S  +S+  G+     LD  
Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDSLYEGTTAIQALDF- 457

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                        F  + +D G + + V   +  ++  C E
Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATVDDCDE 486


>gi|41407293|ref|NP_960129.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395645|gb|AAS03512.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 609

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP+ L D      G  NG+    +++K+G +S+ T EL F  T     G+L+
Sbjct: 224 TKGLSLFYVPKYLFDPKTFELGPRNGVFVTGVEHKMGIKSSPTCELTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           GD++         +E  ++ I + +A    +G   +LA    +A+ R V G         
Sbjct: 284 GDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALS-FRLANSFDEAKSRSEEAAYA------RI 395
                 +I  P ++R++           AL  +  A+  D+   R   A +        +
Sbjct: 339 TAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRVSGADHDMAHRVDDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K    + A  V+ E+++ +GGSG++++  + ++ R+S  +S+  G+     LD  
Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDSLYEGTTAIQALDF- 457

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                        F  + +D G + + V   +  ++  C E
Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATVDDCDE 486


>gi|330961365|gb|EGH61625.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 393

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   GL    +  K+G R++ T E+   N F     +  D+    GP      
Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+  +I  A
Sbjct: 245 FTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357

Query: 430 IARH 433
           IARH
Sbjct: 358 IARH 361


>gi|320034301|gb|EFW16246.1| isovaleryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 430

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + S  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N        +K+L+    L+  ++S      M+ +L   + Y   R     
Sbjct: 261 PKENILGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +A + A ++  A   D + +  E              +  + 
Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|120612726|ref|YP_972404.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120591190|gb|ABM34630.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 601

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 170/407 (41%), Gaps = 74/407 (18%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +  AL    T    K + PK+ S E+  T             + LTE   GT
Sbjct: 128 MYPGLSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174

Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255
           D+  + ++ + ++   +G Y ++G+K F+S+   D       ++LA++    +G  G   
Sbjct: 175 DLGLLRTRAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISL 234

Query: 256 FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+  +  DGS    N +    L++K+G   NAT ++      G L+G       P +
Sbjct: 235 FVVPKYKVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQ------PHK 288

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG---------ILID 351
            ++ + + +++A + V    + L E     A+ YA+ R     +SG          I++ 
Sbjct: 289 GLQAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVH 348

Query: 352 QPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             V K     +A A+ A  +     L    A+S  + K R +      ++ PI K +   
Sbjct: 349 PDVRKMLLTAKAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463
                    M+  GG G+I+E  + +  R++  N I  G+     LD+L    L   G  
Sbjct: 409 NGHISTNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 468

Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503
           L  F +L   L ++ G + K       I  L D ++    + G   F
Sbjct: 469 LKKFGKLVGKLVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGF 515


>gi|288924664|ref|ZP_06418601.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17]
 gi|288338451|gb|EFC76800.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17]
          Length = 577

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 32/341 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +     ++  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEAENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRDGGVNVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E + YA+ R   G  +I  P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGQKIIHFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D              +A+ R+E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDIYKALEDISRDRKLDAEERTEMKKYNRLADAFTPLAKGMNSEYANQNAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469
           +   GGSG+I E    R +R++   SI  G+    V+  +  +  GT       + E   
Sbjct: 409 ISIHGGSGFIMEYKSQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLEASV 468

Query: 470 STLEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
               Q L S   K++ +  ++++  KE  ++ L  FL  ++
Sbjct: 469 CDSLQPLRSRVAKLVALYEEAVNHVKEADNQELHDFLGRRL 509


>gi|222480906|ref|YP_002567143.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453808|gb|ACM58073.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 386

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 42/240 (17%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           Y L+G K W  +       I+ A+ +G     +  FLVP   E     G    + + K+G
Sbjct: 155 YVLNGEKQWITNGQRGGVAIVFAKTDGDDERSITQFLVPADTE-----GFAVGKKEEKLG 209

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLA----- 333
            R+        S+T G    D  +   P E+   +    L +A  +++G R+ +A     
Sbjct: 210 LRA--------SDTTGISFDDCRI---PAENRLTEEGKGLSAAFRTLTGGRIGIASQAVG 258

Query: 334 -------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  EA  YA  R   GG + D   ++   A++A DI+AA  L         EA  +
Sbjct: 259 LAQAAFDEAKAYAAEREQFGGPIDDIQTIQHTFAEMATDISAARLL-------VREACRQ 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E     R+ A   KY   + A +V  EA++  GG GY  +  + R YR++    I  G+
Sbjct: 312 AEAGEDNRVAASKAKYRASETAMSVTNEAVQIHGGYGYTTDFDVERFYRDAKITEIYEGT 371


>gi|91787553|ref|YP_548505.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91696778|gb|ABE43607.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 398

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 30/259 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A++ ++ + + DG + L G K W  +SP++D F++ A
Sbjct: 123 PKLATGEWVGCFGLTEPNHGSDPASMLTRAKPV-DGGFILKGSKMWITNSPIADVFVVWA 181

Query: 248 QVE---GRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           ++E   G+VG     R  LLE G   GL   +++ K+  R++ T E+   + F     LL
Sbjct: 182 KLEDPDGKVGGQESIRGFLLEKGM-KGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL 240

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
            +++   GP         L+ A   ++   +  AE     A  Y   R   G  L    +
Sbjct: 241 PNVSGLKGP------FGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQL 294

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ +AD+  +I        R+    DE K+  E       M  + K   C  +  +   
Sbjct: 295 IQKKLADMQTEITLGLQACLRVGRLMDEDKAMPE-------MISLIKRNSCGKSLDIARM 347

Query: 415 AMECIGGSGYIEERSIARH 433
           A +  GG+G  +E  + RH
Sbjct: 348 ARDMHGGNGIHDEYHVIRH 366


>gi|115379923|ref|ZP_01466981.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821597|ref|YP_003953955.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115363074|gb|EAU62251.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394669|gb|ADO72128.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
            GLTE   G+D AA  +   +  D  Y ++G K W  + P +DA ++        G    
Sbjct: 123 FGLTEPEAGSDAAAQQTVAVRRGDE-YVINGSKNWITNGPKADAIVLFTMTNKEAGNKGI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVST 306
             F+VP      +P G        K+G  +  +  + F +      +LLG       V+ 
Sbjct: 182 TAFIVP----TNTP-GFIRAEPDKKMGISAAHSCSMFFEDMRVPAKYLLGKEGEGFKVAM 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  +I I    A  ++   R +  EA+ Y+  R   G  + +   ++  +AD+A +I
Sbjct: 237 STLDGGRIGI----AAQALGIARAAFEEAVRYSGERKTFGKPIREHQAIQFMLADMATEI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  + A   D+    S E+A A++       +  +MA  V  +A++  GG GY +
Sbjct: 293 DAARLLVHQAALLKDKGVRHSMESAMAKL-------YASEMASRVANKALQVHGGMGYSK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RH R++    I  G+
Sbjct: 346 EMDAERHVRDARITEIYEGT 365


>gi|76810110|ref|YP_334609.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|254259102|ref|ZP_04950156.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
 gi|189339699|pdb|3D6B|A Chain A, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339700|pdb|3D6B|B Chain B, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339701|pdb|3D6B|C Chain C, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339702|pdb|3D6B|D Chain D, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|76579563|gb|ABA49038.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|254217791|gb|EET07175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
          Length = 395

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348
               +L  +    GP         L+SA   ++   +  AE+  H AR+    R   G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|226295306|gb|EEH50726.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 439

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 129/299 (43%), Gaps = 33/299 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K W PK+               T       L+E   G+D  A+ ++  K S G Y ++
Sbjct: 162 IKKKWLPKL--------------ATDTVGSFCLSEPASGSDAFALQTKAVKTSSG-YKIN 206

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-- 286
           G K W  +S  +  FI+ A ++   G   +   + +    G    + + K+G R+++T  
Sbjct: 207 GSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIRASSTCV 266

Query: 287 -----VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
                VE+   N  G        +   + + +I I      +++ G   + A+ I   RR
Sbjct: 267 LNFDDVEIPKENLIGVEGQGYKYAINLLNEGRIGIAAQMTGLAL-GAWENAAKYIWNDRR 325

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           +   G ++ +   M+  +A    +IAAA AL F  A   +  +   ++AA A++      
Sbjct: 326 QF--GQLIGEFQGMQHQVAQAYTEIAAARALVFNAARKKEAGQDFVQDAAMAKL------ 377

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 378 -YASQVAGRVSGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|150390841|ref|YP_001320890.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950703|gb|ABR49231.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 379

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 32/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD +A T+    + DG  Y L+G K F+++   +  +I++A
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDASAQTTTA--VLDGDHYILNGSKIFITNAGYAHTYIIMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TF 295
             +  VG   +   + D    G      + K+G R ++T EL F +             F
Sbjct: 171 MTDKSVGTKGISAFIVDVDTEGFTIGPKEKKLGIRGSSTCELIFDDCRIPKENIIGKEGF 230

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           GF +    +  G +           A  ++   + +L E ++Y + R   G  +      
Sbjct: 231 GFKIAMKTLDGGRI---------GIAAQALGIAQGALDETVNYVKERRQFGRPISAFQNT 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD++  I AA  L ++ A + D     + EAA A++ A        + A  V  +A
Sbjct: 282 QFQLADMSSKIEAARLLVYKAAYNKDMGLPYANEAAMAKLFA-------SEAAMEVTTKA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GYI +  + R  R++    I  G+
Sbjct: 335 VQLHGGYGYIRDYPVERMMRDAKITEIYEGT 365


>gi|114563909|ref|YP_751423.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114335202|gb|ABI72584.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 596

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 41/315 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250
           + LTE   GTD+A + ++     D ++ +SG K F+SS    ++D  I  +LA++    E
Sbjct: 162 MNLTESHAGTDLALLRTKAVPAGDDVFAISGEKIFISSGDHDLADNIIHLVLARLPDAPE 221

Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   F VP+ L +     G  N L    L++K+G   N+T  + F    G L+G  +
Sbjct: 222 GVKGISLFAVPKFLVNADGSLGEANKLSATGLEHKMGIHGNSTCVMHFDGAIGELVGAAH 281

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--IDQP-------- 353
                +  M     L   I  +    ++   A+ YA+ R + G  L  + QP        
Sbjct: 282 QGLKAMFTMMNQARLGVGIQGLGVSDIAYQNALVYAKER-IQGRALSGVKQPEQAADSLL 340

Query: 354 ---------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
                    + +++  +    +    AL         + +   +  A A +  PI K + 
Sbjct: 341 VHGDVRRMLLSQKSFNEGTRALMGQQALWLDQVERHTDPEKAKQANALAALFTPIVKGFV 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461
                    +A +  GG GYI E  + +  R+     I  G+     LD++    L +KG
Sbjct: 401 TDQGFKACVDAQQIYGGHGYINEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKLLADKG 460

Query: 462 TNLFEQLFSTLEQDL 476
             L   L+S + ++L
Sbjct: 461 AAL--TLWSVMVKEL 473


>gi|313829293|gb|EFS67007.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA2]
          Length = 382

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|254480511|ref|ZP_05093758.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039094|gb|EEB79754.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 390

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 150/389 (38%), Gaps = 55/389 (14%)

Query: 95  DKVEFHPAWHALLRRSIHDGL--HCSIWD-RSFEPVVRKQAHKIRAARLYLMA------- 144
           D  E H AW   LRR I   +  H   WD + F P    +    +AA   L+        
Sbjct: 14  DLTEEHEAWREQLRRFIDREIMPHVDEWDEQGFLP----EELWGKAAEFGLLGLGYPEQY 69

Query: 145 -QLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKT 194
             +E G      +++S  ++  S+  L +T   H    P +    S         P+   
Sbjct: 70  GGIETGIDLYHHNILSEELSRTSLGGLPSTLLSHGIGMPPVVAFGSESLKSEIIPPVLAG 129

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----Q 248
              I L +TE  GG+D+A +  Q   + DG  Y ++G K F+S  M   +         +
Sbjct: 130 EKRICLAITEPSGGSDVANL--QTTAVRDGEHYIVNGSKTFISGGMGSHWATTGVRTGGE 187

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303
               V   ++P  LE     G+    L  K G   + T  L F N     G LL +    
Sbjct: 188 GGSGVSVLVIPMDLE-----GVSRTPLNKKQGWWCSDTATLYFDNVRVPAGNLLAEEGNG 242

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             V      D ++ +    A+M  +  RV L +A+++A+ R   G  L D  V++  IA+
Sbjct: 243 FLVIANNFNDERLAM----AVMMEAFARVCLEDAVNWAQERKTFGKRLADHQVIRHKIAE 298

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   I                  +   + A  ++    T  +C +       EAM+ +GG
Sbjct: 299 MKQRINVCQTYIQHCTRQVITGTADFGDIALLKVQCSQTMEFCAR-------EAMQILGG 351

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+    + R YRE   N+I  GS   M
Sbjct: 352 IGYMRGNRVERIYREVRVNAIGGGSEEIM 380


>gi|47230106|emb|CAG10520.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 415

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+ + G     +
Sbjct: 158 LAMSEPNAGSDVVSMRLKAKKQGDH-YVLNGNKFWITNGPDADVLIVYAKTDPGAHQRGI 216

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E G P     Q+L +K+G R + T EL F N       +LG LN     +     
Sbjct: 217 TAFVVEKGMPGFSTAQKL-DKLGMRGSNTCELIFENCRIPEENVLGSLNKGVYVMMSGLD 275

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L  A   V  M+  L  A+ Y   R   G  +    +M+  +AD+   +++     +
Sbjct: 276 LERLVLAAGPVGIMQAVLDCAVPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 335

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + D+    +++ A   +       +C + A  V  + ++C+GG+GYI +    R  
Sbjct: 336 NVARAADKGHLSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPAGRFL 388

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 389 RDAKLYEIGAGT 400


>gi|154248585|ref|YP_001419543.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162670|gb|ABS69886.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 375

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D A + ++ ++  D  Y LSG K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDAANLKTRARRDGDQ-YILSGAKQFITSGKNGNVVIVFAVTDPDAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R++ K+G  S+ T +L F++    L  DL +     E +
Sbjct: 179 ISAFIVPT-----DTPGYEVVRVEEKLGQHSSDTCQLAFNDMR--LPADLRLGA-EGEGL 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDI 366
           KI L  L+   + ++   V +A A   A + + S  +   +P+M+       +AD+A  I
Sbjct: 231 KIALSNLEGGRIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AAA  +    A   +  +    EA+ A++ A        +MA  V + A++  GG GY+ 
Sbjct: 291 AAARHMVLHAAALREAGQPCLTEASMAKLFA-------SEMAEQVCSAAIQIHGGYGYLA 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +    R YR+     I  G+ +
Sbjct: 344 DFPEERIYRDVRVCQIYEGTSD 365


>gi|120553452|ref|YP_957803.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120323301|gb|ABM17616.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 591

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 51/357 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL    +  + + +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLTHGAISALYAHGSEELKQTYLEKLISGEWTGT-------------MCLTEPHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  I ++     DG Y + G K +++    D       ++LA++ G       +  F+V
Sbjct: 173 DLGLIRTKATPNDDGSYAIEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVV 232

Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----K 313
           P+ L D G  N      L++K+G + +AT  + F    G+L+G+ N     +  M    +
Sbjct: 233 PKFLPDSGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGEPNKGMSAMFTMMNEAR 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-------------VMKRAIA 360
           +++ +    ++    + SLA A    + R +SG    D P             +M++ + 
Sbjct: 293 LMVGMQGLGLAEMAYQESLAFARERLQSRSLSGPKNPDGPADPIIVHPDVRRMLMRQKVL 352

Query: 361 DI---ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +    AL +     L   +A+  +E +  +++    +++ P+ K +             +
Sbjct: 353 NEGMRALALFTGHQLDLSVAHPDEEVRENADD--LVQLLTPVVKAFLTDEGYNNANWGQQ 410

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
            +GGSG+ ++  + +  R+     I  G+     +D++   L  KG  L   LF+ L
Sbjct: 411 VLGGSGFTQDWPLEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRALFAEL 467


>gi|262371616|ref|ZP_06064895.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311641|gb|EEY92726.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 387

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 156/383 (40%), Gaps = 63/383 (16%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WD+ E  P    L +++   GL    +D ++  +    A         L+A +E     
Sbjct: 33  EWDEAETFP--RELYKKAADIGLLGVGFDENYGGIAGTDAFYT------LLASVELAKCA 84

Query: 153 SPSVTSASMVALMTTP--------RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           S  + ++ +   + TP         V  +  PKI S E          K S    L +TE
Sbjct: 85  SGGLAASLLSHTIGTPPIQHFAQEEVKAEVLPKILSGE----------KISA---LAITE 131

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLL 262
             GG+D+AA+ ++  +  D  Y ++G K F++S + +D + +  + +    G   +  LL
Sbjct: 132 PSGGSDVAALKTKAVRDGDD-YIVNGEKTFITSGIRADYYSVAVRTDPDAKGANGISMLL 190

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLD 319
            D    G+   +L +K+G  ++ T  L F N       LLG         E+M   + ++
Sbjct: 191 IDAHSEGITKSKL-DKMGWWASDTAHLHFDNVRVPAKNLLG--------AENMGFFVIMN 241

Query: 320 S--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +        A  S     V   EA+ +A++R   G  LID  V++  + D+A  + +  A
Sbjct: 242 NFNMERFFLAASSYGYALVCYEEALDWAQQRQTFGKRLIDHQVVRHKLVDMATRLTSTRA 301

Query: 372 L----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           L    ++RL     +      +    + +A  T  +C          A++ +GG G++  
Sbjct: 302 LLEDTAYRLGKPELQGNELIAQICMLKNVATQTMQFCADA-------AVQTLGGMGFMRG 354

Query: 428 RSIARHYRESPANSILLGSGNAM 450
               R YRE   N I  G+   M
Sbjct: 355 TKSERIYREVKVNMIGGGAEEIM 377


>gi|209870540|pdb|3EOM|A Chain A, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870541|pdb|3EOM|B Chain B, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870542|pdb|3EOM|C Chain C, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870543|pdb|3EOM|D Chain D, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870544|pdb|3EON|A Chain A, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870545|pdb|3EON|B Chain B, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870546|pdb|3EON|C Chain C, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870547|pdb|3EON|D Chain D, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|281307101|pdb|3II9|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307102|pdb|3II9|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307103|pdb|3II9|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307104|pdb|3II9|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
          Length = 396

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 115 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 174 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 232

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348
               +L  +    GP         L+SA   ++   +  AE+  H AR+    R   G  
Sbjct: 233 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364


>gi|221066511|ref|ZP_03542616.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711534|gb|EED66902.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 388

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254
           LTE   G+D A++ ++ + + +  Y ++G K F+S   S   ++L    G  G       
Sbjct: 124 LTEPGAGSDAASLKTRAELVGNE-YIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+VP         G+ Y + + K+G  S  T  + F N     +   N+     E  KI
Sbjct: 183 AFVVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +L +A HY + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQHYMQERKQFGKAIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  +  RLA S  +A +R  S   A A+  A    +  C        EA++  GG GYI 
Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346

Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           E  + R  R++  + IL G+   M V+    +LE
Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380


>gi|148261178|ref|YP_001235305.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|326404583|ref|YP_004284665.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|146402859|gb|ABQ31386.1| isovaleryl-CoA dehydrogenase [Acidiphilium cryptum JF-5]
 gi|325051445|dbj|BAJ81783.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 390

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  +  Y L+G K W  + P +D  ++ A+ +   G    
Sbjct: 131 LAMSEPNAGSDVVSMRLRAEKRGNS-YVLNGSKMWITNGPEADTLVVYAKTDPESG---- 185

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306
           PR     L+E   P   C Q+L +K+G R + T EL F       SN  G +   +NV  
Sbjct: 186 PRGITAFLVEKTMPGFSCAQKL-DKLGMRGSNTGELVFEDCVVPESNVLGGVGRGVNVLM 244

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + ++    A   +  M+ +L   I Y   R   G  + +  +++  +AD+ + +
Sbjct: 245 SGLDYERAVL----AAGPLGIMQSALDIVIPYVHEREQFGQKIGEFQLIQGKLADMYVTM 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +AA A  + +A + D  ++  ++AA A + A     W       +  EA++C+GG+GYI 
Sbjct: 301 SAARAYVYAVAKACDRGRTTRKDAAGAILYAAEKATW-------MALEAIQCLGGNGYIN 353

Query: 427 ERSIARHYRESPANSILLGS 446
           + +  R  R++    I  G+
Sbjct: 354 DYATGRLLRDAKLYEIGAGT 373


>gi|315441994|ref|YP_004074873.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315260297|gb|ADT97038.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 611

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 47/289 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + L G K F+++  +D        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDTDDLFENIVHVVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F+VP+   D      G  NG+    L++K+G +++AT EL F        G+L+
Sbjct: 224 TKGLSLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351
            D +  +G  +  K++ Y  +     +++ +      A+ YA+ R + G  +I       
Sbjct: 284 NDTH--SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTR-IQGADMIQMTDKTA 340

Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI---MA 397
                   P ++RA+           AL    A   D    +  S ++ A   R+   + 
Sbjct: 341 PRVTIMHHPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           PI K    + A   + E+++  GGSG++++  + ++ R++  +S+  G+
Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGT 449


>gi|315225079|ref|ZP_07866896.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287]
 gi|314944762|gb|EFS96794.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287]
          Length = 381

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 49/303 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  G+TE   G+D   + +   K  D  + L+G K
Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTK 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F++   +    ++    G  G       F+V R        G    + +NK+G R++ T
Sbjct: 155 NFITHGKTGQIAVVIARTGEKGNKHAITAFVVER-----GTKGFSSGKKENKLGMRASET 209

Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
            E+ F +     + D N    V  G ++ MKIL   D   +S+  + + +A+     ++ 
Sbjct: 210 AEMIFQDC---RIPDANRLGEVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  LID   +   +AD+A +I A+  L  + A   +  +  +   A A++ A
Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQKNNGQRVTLSGAMAKMYA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                 C ++A     EA++  GG GY ++  + + +R+S   +I  G+     L +   
Sbjct: 324 SEV---CVRVA----TEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQ 376

Query: 458 LEK 460
           ++K
Sbjct: 377 IDK 379


>gi|257455070|ref|ZP_05620313.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257447542|gb|EEV22542.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 594

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251
           LTE   GTD+  I ++     DG Y ++G K F+++    ++D  I L       A    
Sbjct: 166 LTEPHAGTDLGIIKTKAVPNQDGSYNITGTKIFITAGEHDLADNIIHLVLAKTPDAPAGS 225

Query: 252 R-VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           R +  F+VP+   +     G  N +    +++K+G +++AT  + F    GF++G  N  
Sbjct: 226 RGISLFIVPKFHVNADGSLGERNAVSCGSIEHKMGIKASATCVMNFDGAKGFMVGAENTG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQP 353
              +  M     L   +  + G  ++   A  Y   R       GI         ++   
Sbjct: 286 LASMFIMMNYERLTMGLQGIGGAELAYQNATAYTLDRIQGRADSGIQEPNKAADPIVFHA 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--MAPITKYWCCKM 407
            ++R + +      A+   +  +A   D  K    + + +AA  R+  + P+ K +    
Sbjct: 346 DVRRMLLNAKTISEASRCFAMYVAKELDTNKYTDDAEARKAADDRVALLTPVAKAFLTDR 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 +A +C GG GYI E  + +  R++  + I  G+     LD+L
Sbjct: 406 GLEASIDAQQCFGGHGYIREWGMEQIVRDTRISQIYEGTNGIQSLDLL 453


>gi|256819569|ref|YP_003140848.1| acyl-CoA dehydrogenase domain-containing protein [Capnocytophaga
           ochracea DSM 7271]
 gi|256581152|gb|ACU92287.1| acyl-CoA dehydrogenase domain protein [Capnocytophaga ochracea DSM
           7271]
          Length = 381

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 49/303 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  G+TE   G+D   + +   K  D  + L+G K
Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTK 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F++   +    ++    G  G       F+V R        G    + +NK+G R++ T
Sbjct: 155 NFITHGKTGQIAVVIARTGEKGNKHAITAFVVER-----GTKGFSSGKKENKLGMRASET 209

Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
            E+ F +     + D N    V  G ++ MKIL   D   +S+  + + +A+     ++ 
Sbjct: 210 AEMIFQDC---RIPDANRLGEVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  LID   +   +AD+A +I A+  L  + A   +  +  +   A A++ A
Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQKNNGQRVTLSGAMAKMYA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                 C ++A     EA++  GG GY ++  + + +R+S   +I  G+     L +   
Sbjct: 324 SEV---CVRVA----TEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQ 376

Query: 458 LEK 460
           ++K
Sbjct: 377 IDK 379


>gi|222479632|ref|YP_002565869.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452534|gb|ACM56799.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 381

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVG-C 255
             L+E   G+D+ A+++  ++  DG     G  W  +  ++D   + A+ +   GR G  
Sbjct: 123 FALSEAEAGSDVPAMSTAAERDGDGYLVNGGKLWISNGSVADTVTLFAKTDPDAGRKGIS 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-GFLLGDLNVSTGPVEDMKI 314
             V R  ED   +G   +  ++K+G++   T EL F + +            G V+ +K 
Sbjct: 183 SFVVRPEED---DGFIVEGTEDKLGDKGCPTAELRFDDLWIPEERRLGEEGEGFVQALKT 239

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +  A  SV   R +L EA  YA+ R      + D   ++  +AD+     AA  L
Sbjct: 240 LNGGRITIAARSVGIARAALDEAKSYAQEREQFDSPIADFQAIQHKLADMDTKARAAELL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A+     +   +EAA A++       +  +++  V  E ++  GG GY ++    R
Sbjct: 300 MHEAADLKIRDEDYIKEAAQAKL-------YASEISREVANEGIQIHGGYGYTKDFPAER 352

Query: 433 HYRESPANSILLGSGNAM 450
            YR++  N I  G+   +
Sbjct: 353 FYRDAKLNEIYEGTSEVL 370


>gi|254494930|ref|ZP_01052594.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|213690512|gb|EAQ42022.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 388

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + S   K  +  Y L+G K F+++ + SD  I+ A+ +       +
Sbjct: 125 LCITEPFGGSDVAGMRSTAVKQGNK-YILNGSKTFITNGVYSDYLIVAAKTDPSDKYKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G+   +L +K+G R++ T E+ F N       L+G+  +    +     L
Sbjct: 184 SIFVVDRDSKGISATKL-DKLGWRASDTGEIAFDNVEIPAENLMGEEGLGFPYIMQHFAL 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + + +    ++  A+ Y + R   G  L     ++  +A++A  +      ++ 
Sbjct: 243 ERLIMGVNAHARAEFAVDYAMQYMQERIAFGKSLDKFQALRHKVAEMASKVDMCREYNYS 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +    D+     +EA+ +++++        K+A  VI +A++ +GG GY+EE  +AR  R
Sbjct: 303 ITKRLDQGTYVVKEASMSKLLS-------TKIADEVIYDALQLLGGYGYMEEYPMARLLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|50843651|ref|YP_056878.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202]
 gi|282854496|ref|ZP_06263832.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139]
 gi|50841253|gb|AAT83920.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202]
 gi|282582357|gb|EFB87738.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139]
 gi|313765182|gb|EFS36546.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA1]
 gi|313817094|gb|EFS54808.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA1]
 gi|314916814|gb|EFS80645.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA4]
 gi|314918991|gb|EFS82822.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA1]
 gi|314921178|gb|EFS85009.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA3]
 gi|314932475|gb|EFS96306.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL067PA1]
 gi|314956298|gb|EFT00670.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA1]
 gi|314958689|gb|EFT02791.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA1]
 gi|314968821|gb|EFT12919.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA1]
 gi|314980744|gb|EFT24838.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA3]
 gi|315090937|gb|EFT62913.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA4]
 gi|315100028|gb|EFT72004.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA2]
 gi|315102811|gb|EFT74787.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA1]
 gi|315105278|gb|EFT77254.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA2]
 gi|315107366|gb|EFT79342.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA1]
 gi|327455501|gb|EGF02156.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA3]
 gi|327456157|gb|EGF02812.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA2]
 gi|328756836|gb|EGF70452.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA1]
 gi|328759117|gb|EGF72733.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA2]
          Length = 382

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|121605031|ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594000|gb|ABM37439.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 394

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG+K W  +
Sbjct: 117 FGTEATKQKYLPRLATGEFIGCFGLTEPDHGSDPGSMITRARKVPGG-YSLSGNKMWITN 175

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG +  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 176 SPIADVFVVWAKDDEGAIRGF----VLEKGW-KGLSAPAVHGKVGLRASITGEIVMDAVF 230

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 231 CPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEDCFERARQYVLDRKQFGK 284

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  DI+       RL    DE  +  E       +  I K   C  
Sbjct: 285 PLAANQLIQKKLADMMTDISLGLQGCLRLGRMKDEGMAAVE-------VTSIMKRNSCGK 337

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 338 ALDIARLARDMLGGNGISDEFGVARH 363


>gi|332557937|ref|ZP_08412259.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332275649|gb|EGJ20964.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 385

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 39/298 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P     + PK+ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMRLKA 146

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  +G Y L+G K W  + P +D  ++ A+ +   G   +   L + S  G       +
Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
           K+G R + T EL F N    F  +LG         + +++L+  LD   + +SG     M
Sbjct: 206 KLGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D  +    
Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +AA   +       +  + A     +A++ +GG+GY+ +  ++R +R++    I  G+
Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLMEIGAGT 370


>gi|315126577|ref|YP_004068580.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913]
 gi|315015091|gb|ADT68429.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913]
          Length = 391

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDADTLVIYAKTDLNAGAKGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +K+G R + T EL F N       +LG+LN      E +K+L
Sbjct: 191 TAFIVEKTFPGFSTAQKLDKLGMRGSNTCELVFDNCEVPEENILGNLN------EGVKVL 244

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + + +A     + Y   R      +    +++  IAD+   + AA
Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERKQFDSPIGQFQLIQGKIADMYTQMNAA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E +
Sbjct: 305 RSYVYTVAKACDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGYINEYA 357

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 358 TGRLLRDAKLYEIGAGT 374


>gi|296141782|ref|YP_003649025.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029916|gb|ADG80686.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 386

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 29/284 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK  S E               + + +TE   G+D+ A+ +   +  D  Y ++G K 
Sbjct: 117 WLPKAASGE-------------AVLAIAMTEPGTGSDLQAVRTTAVREGD-EYVINGSKT 162

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           F+S+  + D  I++A+ +   G   +  ++ E  +  G    R+  KIG     T EL F
Sbjct: 163 FISNGSLCDLLIIVAKTDTSQGAKGISLIVAETDNLPGFERGRVLQKIGQHGQDTRELSF 222

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           ++       LLG +    G  + M+ L    L  AI  V     ++ EAI Y + R   G
Sbjct: 223 TDMRVPVANLLGGVE-GQGFYQLMRQLPRERLSIAIGGVDAAEKAVLEAIAYTKERKAFG 281

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D    K  +AD   ++ A   L        D    R+ +       A + K W   
Sbjct: 282 HPIADFQNTKFVLADAKTEVFAGRTL-------IDHCIGRAIDGTLDAATASMAKLWATD 334

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           M   VI   ++  GG GY+ E  IA+ Y  +    I  G+   M
Sbjct: 335 MQCRVIDSVLQLFGGYGYMMEYPIAQLYAGARVQKIYGGTNEIM 378


>gi|327404135|ref|YP_004344973.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327319643|gb|AEA44135.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 379

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 44/266 (16%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL- 257
           GLTE   G+D  A+  +   + DG Y  ++G K W       D  ++L     R G  L 
Sbjct: 124 GLTEPNTGSD--AMRMKCTAVKDGDYWVVNGAKNWITHGLSGDVAVVLI----RTGELLD 177

Query: 258 ----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
                  ++E G+P G    ++K+K+G R++ T EL F N       ++G+  V  G  +
Sbjct: 178 SNGITAFIVEKGTP-GFSAVKIKDKLGVRASETAELIFDNVRLHESQVIGE--VGQGFKQ 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK-RAI----A 360
            M IL   D   +S++ +   +A      ++ YA+ R   G     QP+ K +AI    A
Sbjct: 235 AMHIL---DGGRISIAALSCGIARGAYEASVKYAKEREQFG-----QPIGKFQAIGFKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A ++ AA  L+F+ A+  +  +  + + A+A       KY+  +++     EA++ +G
Sbjct: 287 DMATEVEAAELLTFQAADYKNRNQKMTTQGAFA-------KYFASEVSVRCGNEAVQIMG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY +E    +  R++   +I  G+
Sbjct: 340 GYGYTKEYPAEKFLRDAKLMTIGEGT 365


>gi|260591324|ref|ZP_05856782.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319]
 gi|260536690|gb|EEX19307.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319]
          Length = 577

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L      E + YA+ R   G  +I  P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ A   D  K+              R E   Y R+     P+ K    + A     
Sbjct: 347 SLLYQTARYVDIYKALEDIARGQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +A+   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L
Sbjct: 407 DAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457


>gi|154253221|ref|YP_001414045.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157171|gb|ABS64388.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 390

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +K  D  + L+G K W  ++P ++  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMRLKAEKKGD-RFVLNGSKMWITNAPDAETLIVYAKTDASAGPKGI 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
            P L+E G       Q+L +K+G R + T EL F +       +LG LN      E +++
Sbjct: 190 TPFLIEKGMKGFRPAQKL-DKLGMRGSNTAELVFEDCEVPEENVLGKLN------EGVRV 242

Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+     + A+++      M+  +   I Y   R   G  +    +M+  +AD+   + A
Sbjct: 243 LMSGLDYERAVLAAGPLGIMQACMDAVIPYVHERKQFGEPIGTFQLMQGKLADMYSTMNA 302

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A  + +A + D  ++  ++AA A + A     W       +  EA++ +GG+GYI + 
Sbjct: 303 CRAYVYAVAKACDRGQTTRKDAAGAILYAAEKATW-------MALEAIQALGGNGYINDY 355

Query: 429 SIARHYRESPANSILLGS 446
           S  R  R++    I  G+
Sbjct: 356 STGRLLRDAKLYEIGAGT 373


>gi|254479683|ref|ZP_05092980.1| Acyl-CoA dehydrogenase, C-terminal domain protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034382|gb|EEB75159.1| Acyl-CoA dehydrogenase, C-terminal domain protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 391

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 20/275 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           ++E       P+ +        LTE   GTD A I +      D  Y L+G K F+++  
Sbjct: 114 TKEQKEKYLVPLARGEKLGAFALTEPNAGTDAAGIQTTAMLEGDH-YVLNGCKIFITNGG 172

Query: 239 MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++D +I+ A+ +   G   +   ++E G P G    +++ K+G R +   EL F +    
Sbjct: 173 VADVYIVFAKTDKSQGAKGISAFIVEKGFP-GFSIGKIEEKMGIRGSRAAELVFEDC--- 228

Query: 298 LLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351
           ++   N+     E  KI ++ LD   + +    + +A+A       Y + R   G  +  
Sbjct: 229 IVPKENLLGKEGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGK 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  IA++A  ++AA  L +  A   +   S S EAA A++ A  T       A  V
Sbjct: 289 FQGLQWYIAEMATKVSAARHLVYYAAWRKENNLSYSMEAAMAKLFASET-------AMEV 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A++  GG GY ++  + R  R++    I  G+
Sbjct: 342 TTKAVQIFGGYGYTKDYPVERLMRDAKITEIYEGT 376


>gi|71065730|ref|YP_264457.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038715|gb|AAZ19023.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 384

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y ++G K +++ +P +  F ++A+ +      G + 
Sbjct: 124 LTEPDSGSDAASLKTTAIKDGD-TYIINGTKRYITNAPEAGVFTVMARTDPQNKRSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            F+V    E  +P G+   ++  K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV----ESDTP-GITLGKIDKKMGQKGAHTCDVIFDNCVVPADALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A  S       L +A+HYA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQFGQPIANFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ++    +   DE K    E++ A++ A        +M   V   A++  GG+GYI +  
Sbjct: 297 KSMVLDASRLRDEGKDVVTESSCAKMFA-------TEMCGRVADRAVQIHGGAGYIADYG 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|75759071|ref|ZP_00739178.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218900468|ref|YP_002448879.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228905096|ref|ZP_04069128.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|74493470|gb|EAO56579.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218542511|gb|ACK94905.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228854539|gb|EEM99165.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 381

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|195998726|ref|XP_002109231.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens]
 gi|190587355|gb|EDV27397.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens]
          Length = 633

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 33/298 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------- 249
           LTE   G+D  +I ++    SDG  Y L+G+K W  +  ++D   + AQV          
Sbjct: 195 LTEPSSGSDANSIQTKAVLDSDGKHYILNGNKIWISNGGLADVMTVFAQVPFQSSDSEKV 254

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             RV  F+V R    G  NG      + K+G RS+ T  + F N       +LG   V  
Sbjct: 255 SQRVTAFIVERDF-GGVTNGPP----EKKMGIRSSNTASVYFDNVKVPVENVLG--KVGD 307

Query: 307 GPVEDMKILIYLDSAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M IL      +   +SG+ R+ +A++I +A  R      LI+   ++  IA +A+
Sbjct: 308 GFKVAMNILNNGRFGMGAGMSGLIRMLIAKSIEHANNRVQFRRKLIEYQSIQEKIAKMAI 367

Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              A  ++++ ++N+ D   K    EAA ++++   + +  C        E ++ +GG G
Sbjct: 368 THYAVESVAYAVSNNMDRGIKEYQVEAAISKVLGSESGWNTCD-------ECLQILGGIG 420

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSG 480
           Y+ E +I R  R+     I  G+ + + L + LN ++   N  ++L   +++ + + G
Sbjct: 421 YMREANIERFMRDLRIFRIFEGTNDILRLFIALNGVQYAGNHLKELQKAMKEPISNFG 478


>gi|118591690|ref|ZP_01549086.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118435683|gb|EAV42328.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 524

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 14/257 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV--EGRVG 254
           LTE   G+D++ I  +  +  DG + +SG K F+S    D       ++LA+   EG  G
Sbjct: 158 LTEPDAGSDLSRIRCRAVQAGDG-WSISGEKIFISGGDQDMSEKIYHLVLARTSDEGVKG 216

Query: 255 C--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              FL P    DGS N +   R++ K+G  ++ T +L F      L+G        +  M
Sbjct: 217 LSLFLCPCTRADGSRNAVTVTRIEEKMGLHASPTCQLAFDGAMAELIGREGEGLKAMFTM 276

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI--ALDIAAAT 370
                +D A+  V+    +   A  YA  R   G     +PV      D+   LD   A 
Sbjct: 277 MNHARVDVALQGVAHAARAADIASAYAAERK-QGRDAAGKPVTLDGHVDVRRMLDEIDAL 335

Query: 371 ALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL  R +A+         E  A A  + PI K +C +         M+ +GG GY++E  
Sbjct: 336 ALGGRAIAHLALVTVEAGENRALAEFLTPIAKTFCTQAGMQATELGMQVLGGYGYLKEYF 395

Query: 430 IARHYRESPANSILLGS 446
           + + YR+    +I  G+
Sbjct: 396 LEQCYRDVRITAIYEGA 412


>gi|315110486|gb|EFT82462.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA2]
          Length = 382

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|226366182|ref|YP_002783965.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244672|dbj|BAH55020.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 34/278 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G    
Sbjct: 130 IAMTEPGTGSDLQGIKTRAVRDGDD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             L+ +    G    R  +KIG ++  T EL F++              GFL    N+  
Sbjct: 189 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNL-- 246

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I      A+++ + M  +L   I Y R R   G  +      +  +A++A + 
Sbjct: 247 -PQERLSI------AVVAAAAMESALDMTIQYCRDRKAFGKSIGSFQNTRFVLAELATEA 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   L  +     ++ K   +EAA A       K+W  +    +I   ++  GG GY++
Sbjct: 300 TAVRVLVDKFIELLNDEKLSVQEAAMA-------KWWTTEAQVRLIDRCLQLHGGYGYMK 352

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E  IA+ Y +S   +I  G+   M      ++ +G NL
Sbjct: 353 EYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 386


>gi|241087444|ref|XP_002409197.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215492666|gb|EEC02307.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 429

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 28/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251
           L ++E   G+D+A++    QK  D  Y L+G K W  + P++D   + A+        + 
Sbjct: 168 LAMSEAGSGSDVASMKLSAQKDGDH-YILNGTKFWITNGPLADVLFVYARTNPSAAKPQH 226

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F++    E  +P     Q+L +K+G R + T EL F +       L+G+LN   G 
Sbjct: 227 GISAFII----EKNTPGFSIGQQL-DKLGMRGSPTSELVFEDCRIPAKNLVGELN--KGM 279

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              M  L Y  L  A   V  M+ S   A  Y   R   G  +    +++  IAD+   +
Sbjct: 280 YVLMSGLDYERLVLAAGPVGIMQASCDIAFEYVHTRKQFGKPIGSFQLLQGKIADMYTTL 339

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  +  +  A + D+    S++ A   +       +C + A  V  +A++C+GG+GYI 
Sbjct: 340 NACRSYLYSTARAVDQGHVLSKDCAGVIL-------YCAEKATQVALDAIQCLGGNGYIN 392

Query: 427 ERSIARHYRESPANSILLGS 446
           +    R  R++    I  G+
Sbjct: 393 DYPTGRLLRDAKLYEIGAGT 412


>gi|72160472|ref|YP_288129.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71914204|gb|AAZ54106.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 391

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           L+E   G+D AA+T++ ++  D  Y L G K W      +D + ++A+        + CF
Sbjct: 127 LSEPHAGSDPAAMTTRARRDGDH-YILDGVKAWITHGGQADFYTVMARTSDDRSRGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVP         GL   R + K+G  ++ T  L F      +  D  +          L 
Sbjct: 186 LVP-----ADTPGLSADRPERKMGLTASHTTMLRFDGVR--IPADQRIGAEGQGLSIALS 238

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++ +   LA+A     + YAR+R   G  +I+   +   +AD+A  +  A A
Sbjct: 239 SLDAGRLGIAAVATGLAQAALDTAVDYARQREAFGKPIIEHQGLAFLLADMAAAVETARA 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + R A   D     S+EA+ A+++A          A  V  +A++ +GG GY  +  + 
Sbjct: 299 ATLRAARLKDSGLPYSKEASIAKLIA-------TDNAMRVTTDAVQVLGGYGYTRDFPVE 351

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I  G+
Sbjct: 352 RYMREAKVMQIFEGT 366


>gi|53720357|ref|YP_109343.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           K96243]
 gi|52210771|emb|CAH36755.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           K96243]
          Length = 413

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 25/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +SP++D F++ A
Sbjct: 143 PKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITNSPIADVFVVWA 201

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +++      +   +LE G   GL    +  K+G R++ T E+     F     +L  +  
Sbjct: 202 KLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKG 260

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAI 359
             GP         L+SA   ++   +  AE+  H AR+    R   G  L    ++++ +
Sbjct: 261 LRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKL 314

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL    DE  +  E       +  I K   C  A  +   A + +
Sbjct: 315 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 367

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  +ARH
Sbjct: 368 GGNGISDEFGVARH 381


>gi|304311065|ref|YP_003810663.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796798|emb|CBL45010.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 606

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 134/302 (44%), Gaps = 41/302 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  + ++ +  +DG Y ++G K F+S    D       I+LA++       
Sbjct: 165 LTEPQCGTDLGQVKTRAEPNADGSYSITGTKIFISGGDHDLTDNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   D     G  N +    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 225 RGISLFIVPKHRPDAAGNTGEFNNVHCGSIEHKMGIKASATCVMNFEGATGYLIGPPNKG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM--- 355
              +        + +++  +    ++   A+ YA+     R +SG    D+   P++   
Sbjct: 285 LQCMFTFMNTARVGTSVQGLGCSELAYQGALPYAKERLSMRALSGKTAPDKVADPLISHG 344

Query: 356 --------KRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
                   ++A A+   A+   AA    + +A    E +  +++  +   M PI K +  
Sbjct: 345 DVRRMLLTQKAFAEGGRAMIYYAAKIADYMMAGETQEDRDAADD--HLGFMTPILKAFLT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT 462
           +         M+  GG GYI+E  + +  R++  +++  G+     LD+L    LL+KG 
Sbjct: 403 ETGLESANIGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGIQALDLLGRKILLQKGK 462

Query: 463 NL 464
           + 
Sbjct: 463 SF 464


>gi|229158903|ref|ZP_04286960.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228624514|gb|EEK81284.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 381

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|187776881|ref|ZP_02993354.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC
           15579]
 gi|187775540|gb|EDU39342.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC
           15579]
          Length = 379

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 24/269 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +   +G    + ++K+G R+++T EL F +       LLG      G    MK 
Sbjct: 181 ISAFILEKEMSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + ++   + +AE     A+ Y + R   G  L     ++  IAD+ + + AA
Sbjct: 239 L---DGGRIGIAAQALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      ++ + +AA A++ A  T  +       V  ++++ +GG GY ++  
Sbjct: 296 KYLVYKSAWKKSTGENYTMDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R  R++    I  G+     + + N L
Sbjct: 349 LERMLRDARITEIYEGTSEVQKMVIANNL 377


>gi|33599571|ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567167|emb|CAE31081.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 385

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 150/318 (47%), Gaps = 44/318 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +++ + T++  +A + TP+    + P I   E               + + +TE   G+D
Sbjct: 94  ILTQTDTASPPIAAVGTPQQKARYLPAIVRGE-------------CLVAIAMTEPDVGSD 140

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLE 263
           IA + ++  +  D  + L G K F+++ + +D +++ A+ +        V  FLV    +
Sbjct: 141 IATLRTRAVRDGDE-WVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLV----D 195

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP----VEDMKILI 316
            G+P GL  +R  +K+G +S+ T +L F       G LLG+ N         V++ ++++
Sbjct: 196 KGTP-GLRVERRLDKMGWKSSDTAQLSFDGCRVPAGALLGEPNRGFAALMRNVQNERLVL 254

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++   + ++A+ + Y R R   G  L D+  ++  +A +A  + +A    + +
Sbjct: 255 ----AAQALGESQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSV 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D   +R  E      M    K  C ++   V+ + ++  G +GY++  ++ R YR+
Sbjct: 311 A-ALD---ARGVECVKEVSM---IKALCGELVNEVMDDCVQFHGATGYMQGTAVERMYRD 363

Query: 437 SPANSILLGSGNAMVLDV 454
           +  ++I  G+   M+ +V
Sbjct: 364 ARVHAIGGGATEIMLEEV 381


>gi|321452407|gb|EFX63798.1| hypothetical protein DAPPUDRAFT_267664 [Daphnia pulex]
          Length = 263

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 13/252 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V  
Sbjct: 1   MSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTA 59

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            L +    G    +  +K+G R + T EL F +     +   NV  G  +  K+L+  LD
Sbjct: 60  FLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDV---EVPAANVLGGVNQGAKVLMSGLD 116

Query: 320 SAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                ++G     M+  +   I Y   R   G  + +  +++  +AD+   + A  + ++
Sbjct: 117 YERAVLTGGPLGIMQSVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAY 176

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + D   +  +     R        WC + A  +  E ++  GG+GYI E  + R +
Sbjct: 177 TVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGRLW 234

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 235 RDAKLYEIGAGT 246


>gi|317507482|ref|ZP_07965208.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
 gi|316254220|gb|EFV13564.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
          Length = 611

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 56/327 (17%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K+W   I +  +D T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 146 QKEWCKVIAAGNWDAT-------------MVLTEADAGSDVGAGRTKATEQPDGTWHIEG 192

Query: 231 HKWFLSSPMS-DAF-----IMLAQVEGRVG------CFLVPRLLED------GSPNGLCY 272
            K F+S   S D F     ++LA+  G  G       F VP+   D      G  NG   
Sbjct: 193 VKRFISGATSGDLFENIFHLVLARPVGAKGGTKGLSLFFVPKYHYDFKTQTRGERNGAFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             L++K+G +++ T E+ F        G+L+GD++     + D+     +   I S + +
Sbjct: 253 TNLEHKMGIKASTTCEIAFGQHGVPAVGWLVGDVHNGIAQMFDVIENARMTVGIKSTATL 312

Query: 329 RVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             +   A+ +A+ R V G               ++  P ++R++ +         AL   
Sbjct: 313 STAYLNALEFAKER-VQGSDFTEMMNKDAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLL 371

Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   D A +       ++ AY     + P+ K    +   + +AE+++  GGSG++++ 
Sbjct: 372 TATYQDPAAAERLFGADKDLAYRVNDFLLPLVKGIGSEQGYSHLAESLQIFGGSGFLQDY 431

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
            I ++ R++  +++  G+     LD  
Sbjct: 432 PIEQYIRDAKIDTLYEGTTAIQSLDFF 458


>gi|126663341|ref|ZP_01734339.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126624999|gb|EAZ95689.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 389

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   K  D  Y ++G K F+++ + +D +++ A+    +G   V
Sbjct: 125 LCITEPFGGSDVAGMRTTAVKKGDS-YVINGSKTFITNGVYADYYVVAAKTTPELGNKGV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L D   +G+   +L +K+G R++ T E+ F N       L+G+       +     L
Sbjct: 184 SIFLVDAKTSGISATKL-DKLGWRASDTAEIAFDNVEIPLENLMGEEGKGFPYIMQHFAL 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  AI + +    ++   I Y  +R   G  +     ++  + + A ++      ++ 
Sbjct: 243 ERLIMAINAHARAEYAIDYTIEYMSQREAFGTTINKFQALRHTMVEHATEVEHCKVFNYA 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                ++ +   +EA  A++ +        K+A   I   ++ +GG GY+EE  +AR  R
Sbjct: 303 AVARLNKGEYVVKEATMAKLKS-------TKVADEAIYSCLQMLGGYGYMEEYPLARLLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|158319150|ref|YP_001511657.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139349|gb|ABW17661.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 379

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + DG  Y L+G K F+++   +D +I++A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQTIAVLDGDHYILNGSKIFITNAGYADIYIIMAMTDKSQGTRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
           +   + +    G    + ++K+G + ++T EL F N       LLG      G    MK 
Sbjct: 181 ISAFIVEADTPGFSIGKKESKLGIKGSSTCELVFENCRIPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + ++   + +A     E + Y + R   G  +      +  +AD+A  I AA
Sbjct: 239 ---LDGGRIGIAAQALGIAQGALDETVSYVKERKQFGKSISYFQNTQFQLADMATKIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A    E    S EAA A++ A  T       A  V  +A++  GG GY  E  
Sbjct: 296 RLLVYKAAFLKQEGLPYSNEAAMAKLFASET-------AMEVTVKAVQLHGGYGYTREYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|302820126|ref|XP_002991731.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii]
 gi|300140412|gb|EFJ07135.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii]
          Length = 416

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 116/252 (46%), Gaps = 14/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++   G Y L+G+K W  + P+++  I+ A+ +   G   +
Sbjct: 158 LVMSEPNSGSDVVSMKCKAERRDKG-YVLNGNKMWCTNGPVANTLIVYAKTDNSAGAHGI 216

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F + F      L      V  M   + L
Sbjct: 217 TAFIIEKGMEGFTTAQKLDKLGMRGSDTCELVFQDCFVPPENILGQEGKGVYVMMSGLDL 276

Query: 319 DSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +++ SG    M+  +   + Y R+R   G  + +  +++  +AD+   + A+ AL  
Sbjct: 277 ERLVLA-SGPLGLMQACMDVVLPYVRQREQFGKPIGEFQLIQGKLADMYTKMQASRALVH 335

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A S D      ++ A A + +        + A  +  +A++C+GG+GY+ E    R  
Sbjct: 336 SVARSCDAGHIDRKDCAAAILFSS-------ENATQMALQAIQCLGGNGYVNEYPTGRLL 388

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 389 RDAKLYEIGAGT 400


>gi|256380219|ref|YP_003103879.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924522|gb|ACU40033.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 383

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 37/279 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252
            GLTE  GG+D  A+ +   ++ DG + L+G K F+++  +   + + +A V GR     
Sbjct: 124 FGLTEPGGGSDAGALRTTA-RLEDGQWVLNGTKAFITNSGTSITSLVTVAAVTGRKPDGR 182

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +   +VP     G+P GL      +K+G  ++ T EL F +       LLG+      
Sbjct: 183 PEISTIIVP----AGTP-GLAVGSKYSKVGWNASDTHELSFQDCRVPEANLLGERGRGY- 236

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                + L  LD   ++++ + V LA     E + YA+ R   G  +     ++  IAD+
Sbjct: 237 ----AQFLRTLDEGRVAIAALGVGLAQGCVDECVRYAKEREAFGSPIGRYQAIQFKIADM 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + +  A    ++ A+     +    EAA A++++        + A     E  +  GG 
Sbjct: 293 EVRVHTARLAYYQAASKMLRGEPFKREAAIAKLVS-------SEAAMDNAREGAQVFGGY 345

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G++ E  + R YR+  A  + +G G + V  +L   E G
Sbjct: 346 GFMNEYPVGRFYRD--AKILEIGEGTSEVQRMLIARELG 382


>gi|228988569|ref|ZP_04148656.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771186|gb|EEM19665.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 381

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DYPVERFFRDAKITQIYEGT 369


>gi|146340123|ref|YP_001205171.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192929|emb|CAL76936.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 381

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 142/362 (39%), Gaps = 39/362 (10%)

Query: 116 HCSIWD--RSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165
           H   WD  + F   V ++A  +    +Y+        + +L+A  +     T    V+  
Sbjct: 27  HALRWDEDKHFPVDVMREAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATGCPTVSAF 86

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            +      W    F  E       P +    +     LTE   G+D AA+ ++  +  D 
Sbjct: 87  ISIHNMASWMIDTFGTEAQRQEYLPKLCPMDLIASYCLTEPGAGSDAAALRTRAVRDGDD 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            Y ++G K F+S   +   ++     G  G   +  L+ D    G+ +   + K+G  + 
Sbjct: 147 -YVINGQKQFISGAGATDILVAMVRTGADGPGGISTLVIDAKTPGVSFGANERKMGWNAQ 205

Query: 285 ATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            T  + F N              GF +    +  G          L+ A  S+ G + +L
Sbjct: 206 PTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGG---------RLNIAACSLGGAQAAL 256

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            + + Y R R   G  L +   ++  IAD+A+++ AA    +R A + D       + A 
Sbjct: 257 DKTLAYTRERKAFGKRLDEFQALQFRIADMAIELEAARTFLWRAAAALD------HKDAD 310

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + IL G+   M L
Sbjct: 311 ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIMRL 370

Query: 453 DV 454
            V
Sbjct: 371 IV 372


>gi|126729532|ref|ZP_01745345.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126709651|gb|EBA08704.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 386

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 130/271 (47%), Gaps = 36/271 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRND-RYVLNGNKYWITNGPDADTLVVYAKTDPDAGPKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F +    F  +LG         + +++L
Sbjct: 187 TAFLVEKSMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGQEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   + E + Y R RH  G  +    +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMAACMDEIMPYLRDRHQFGKPIGSFQLMQGKIADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGY 424
            A  + +A + D  + +R++ AA            CC    + A     +A++ +GG+G+
Sbjct: 301 RAYVYEVAKACDRGEVTRADAAA------------CCLYASEEAMKQAHQAVQAMGGAGF 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + + ++AR +R+  A  + +G+G + +  +L
Sbjct: 349 LNDAAVARIFRD--AKLMEIGAGTSEIRRML 377


>gi|83859544|ref|ZP_00953064.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851903|gb|EAP89757.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 39/289 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           PK+ S EY              +G + +TE   G+D+  I +   K  +G Y ++G K F
Sbjct: 121 PKLISGEY--------------VGAIAMTEPGAGSDLQGIKTTAVKDGNG-YKINGSKTF 165

Query: 235 LSSPMSDAFIML-AQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +++  +  FI++ A+ +   G  G  L   L+E    +G    R  +K+G +S  T EL 
Sbjct: 166 ITNGGTANFIVVVAKTDPKGGAKGTSLF--LVETDGLDGFRRGRNLDKVGMKSQDTAELF 223

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F +       LLG+     G  + M+ L    L  A+ +V  M+ +LAE I Y + R   
Sbjct: 224 FEDMKVPAEALLGEAE-GQGFFQLMEQLPQERLQIAVQAVGMMKRALAETIAYVKERQAF 282

Query: 346 GGILIDQPVM--KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           G     +PVM  +     +A   + AT     + +  D       +AA     A + KYW
Sbjct: 283 G-----KPVMGFQNTQFKLAELKSKATIAEVFVQHCSDLLIKGQLDAA----TASMAKYW 333

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              +   +I E ++  GG G++ E  IAR +R+S    I  G+   M L
Sbjct: 334 TTDIQCELIDECVQLHGGYGFMNEYPIARMWRDSRVQRIYGGTNEIMKL 382


>gi|228312334|pdb|3GQT|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312335|pdb|3GQT|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312336|pdb|3GQT|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312337|pdb|3GQT|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|251836940|pdb|3GNC|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836941|pdb|3GNC|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836942|pdb|3GNC|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836943|pdb|3GNC|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
          Length = 399

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 118 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 176

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 177 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 235

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               +L  +    GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 236 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 289

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 290 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 342

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 343 LDIARLARDMLGGNGISDEFGVARH 367


>gi|313205895|ref|YP_004045072.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445211|gb|ADQ81566.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022207|gb|EFT35235.1| acyl-CoA dehydrogenase domain protein [Riemerella anatipestifer
           RA-YM]
 gi|325336665|gb|ADZ12939.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 379

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 115/290 (39%), Gaps = 44/290 (15%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           K  S E       P+    V     L+E   G+D  +  +  +   D  Y L+G K W  
Sbjct: 100 KYASEEQKQKYLVPLASGEVIGAFALSEPEAGSDATSQKTTAEDKGD-YYLLNGTKNWIT 158

Query: 236 SSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +  +I++AQ     G      F+V R  E     G      ++K+G R        
Sbjct: 159 NGSTATYYIVIAQTHPEKGHKGINAFIVERGWE-----GFEIGPKEDKMGIRG------- 206

Query: 291 FSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AI 336
            S+T   L  D+ V   P E+   +       A+  ++G R+ +A             A+
Sbjct: 207 -SDTHSLLFTDVKV---PKENRIGEDGFGFKFAMAVLNGGRIGIASQALGIASGAYELAL 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +I+   +   +AD+A  I AA  L  + A   D+ K  SE  A A++ 
Sbjct: 263 KYAKERKAFGTEIINHQAVAFKLADMATQITAARMLCLKAAAEKDQGKDISESGAMAKLF 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        K A     EA++  GG GY+ E  + R  R++    I  G+
Sbjct: 323 A-------SKTAMDTTIEAVQIHGGYGYVREYHVERMMRDAKITQIYEGT 365


>gi|221640794|ref|YP_002527056.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221161575|gb|ACM02555.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 403

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K ++G Y L G K W  ++P++D F++ A+ E   G++  
Sbjct: 145 FGLTEPDAGSDPAGMKTVARKTAEG-YVLHGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +LE G   GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA +H AR+    R   G  L    + +  +A++  DIA  
Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A      A +  GG+G  EE  
Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367

Query: 430 IARH 433
           + RH
Sbjct: 368 VMRH 371


>gi|187933914|ref|YP_001884609.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187722067|gb|ACD23288.1| butyryl-CoA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
          Length = 379

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   I DG  Y L+G K F+++  +++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAILDGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + + S  G    +L++K+G R ++T EL   +       L+G      G    MK 
Sbjct: 181 ISAFIVEKSFPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + ++   + +AE     A++Y + R      L  Q  ++  IA++ + I AA
Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      +  S +AA A++ A        ++A  V  +A++  GG GY ++  
Sbjct: 296 RHLVYKAACKKQNGQPYSVDAARAKLFA-------AEVAMDVTTKAVQIFGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|149375973|ref|ZP_01893740.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359853|gb|EDM48310.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +   D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLSAKDAGD-HYVLNGSKMWITNGPDANVYVIYAKTDPSAGPRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   NV  G     K+L+  
Sbjct: 189 TAFIVERDTPGFSQAQKLDKLGMRGSNTCELVFEDA---KVPKENVMGGEGNGAKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+ ++   + Y R R   G  + +  +++  +AD+   +  A + 
Sbjct: 246 LDYERLVLSGGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVADMYTWMNTAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D   +  ++AA A +       +  +MA  +  +A++ +GG+GYI E    R
Sbjct: 306 VYMVAMSADRGNTTRKDAAGAIL-------YSAEMATKLALDAIQLLGGNGYINEYPTGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|333028169|ref|ZP_08456233.1| putative acyl-CoA dehydrogenase domain-containing protein
           [Streptomyces sp. Tu6071]
 gi|332748021|gb|EGJ78462.1| putative acyl-CoA dehydrogenase domain-containing protein
           [Streptomyces sp. Tu6071]
          Length = 389

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P     + I   LTE   GT  A IT+   +  D  Y LSG K  ++  +  D +++ A+
Sbjct: 110 PSITGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           VEG  G       LVPR     +  G+  +   N +G        L F  T       LG
Sbjct: 168 VEGSAGHEGTMALLVPR-----NAPGVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLG 222

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
               + G   D+ +  +L  + +SV+   V LAE     A+ YAR R   G  L  +  +
Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+ A DI AA  L    A  F+E    +E+A+    MA   K     M   V  +A
Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEEG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY + + I R YR++ A     G+
Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363


>gi|315607671|ref|ZP_07882665.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574]
 gi|315250607|gb|EFU30602.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574]
          Length = 577

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 32/341 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +     ++  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEAENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRDGGVNVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E + YA+ R   G  +I  P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGQKIIHFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D              +A+ R+E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDIYKALEDISRDRKLDAEERAEMKKYNRLADAFTPLAKGMNSEYANQNAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469
           +   GGSG+I E    R +R++   SI  G+    V+  +  +  GT       + E   
Sbjct: 409 ISIHGGSGFIMEYKSQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLEAPV 468

Query: 470 STLEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508
               Q L S   K++ +  ++++  KE  ++ L  FL  ++
Sbjct: 469 CDSLQPLRSRVAKLVALYEEAVNHVKEADNQELHDFLGRRL 509


>gi|226364663|ref|YP_002782445.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243152|dbj|BAH53500.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 611

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 135/318 (42%), Gaps = 56/318 (17%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA  I  R +  T             + LTE   G+D+ A  ++  K  DG + + G
Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192

Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRLL------EDGSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+        E G  NG   
Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETNEFGERNGAFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + +AT E+ F        G+L+G+++     + D+     +     +++ +
Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312

Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375
                 A+ YA+ R V G  L                P ++RA+A          A+   
Sbjct: 313 STGYLNALEYAKER-VQGADLTQMTDKAAPRVTITHHPDVRRALAMQKAYAEGLRAVYLY 371

Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   DEA ++      ++ A+    ++ PI K    + A   + ++++  GGSG++++ 
Sbjct: 372 TAAHQDEATAKLVSGADKDLAFRVNDLLLPIVKGVGSERAYQYLTDSLQTFGGSGFLQDY 431

Query: 429 SIARHYRESPANSILLGS 446
            I ++ R++  +S+  G+
Sbjct: 432 PIEQYIRDAKIDSLYEGT 449


>gi|294141872|ref|YP_003557850.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293328341|dbj|BAJ03072.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 385

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G+ G   +  +
Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGATELLVVMCRTGQDGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           +      G+ Y + ++K+G  +  T E+ FS        LLG+     G    MK L   
Sbjct: 183 VVPADAKGVTYGKAEDKMGWNAQPTREITFSEVRVPVTNLLGEEG--QGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERATQYMTERKQFGKPIATFQALQFKLADMATELVAARQI-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E +AY      + K +   +   V   A++  GG GYI E  + RH R+
Sbjct: 300 A-AFKLDCGDPEASAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHVRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|260834039|ref|XP_002612019.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae]
 gi|229297392|gb|EEN68028.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae]
          Length = 411

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +S  + A ++ A  +       +
Sbjct: 147 FALSEPGNGSDAGAASTVARLEGDH-WVLNGTKAWITNSYEASATVVFATTDKGLKHKGI 205

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP   E     GL   + ++K+G R+ +T  L F +     +   N+   P    K
Sbjct: 206 SAFLVPMPTE-----GLTLGKKEDKLGIRATSTAYLIFEDC---KIPKENLLGKPGMGFK 257

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++   + +A+A     + YA +R   G  +     ++  +AD+ + + 
Sbjct: 258 IAMQTLDAGRIGIASQGLGIAQAALELAVDYAMKREAFGSPIAKLQSVQNKLADMHMSVE 317

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L+++ A   D  K+  +EAA A++ A     +C         + ++ +GG GY+ +
Sbjct: 318 SARLLTWKAAAYKDAGKNYIKEAAMAKLAASEAATFCAH-------QCIQVLGGMGYVTD 370

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               R+YR++    I  G+     L +   L K
Sbjct: 371 MPAERYYRDARITEIYEGTSEVQRLVIAGRLLK 403


>gi|220923545|ref|YP_002498847.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948152|gb|ACL58544.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 376

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ K        LTE   G+D AA+ ++ +++ D  + LSG K F++S   +D  I+ A 
Sbjct: 110 PLAKGEKLAAFCLTEPSAGSDAAALKTRARRVGD-RWILSGTKQFITSGRNADVAIVFAV 168

Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
            +   G+ G   F+VP         G    RL++K+G R++ T ++ F     T   +LG
Sbjct: 169 TDPAAGKKGISAFVVPT-----DTPGYTVARLEHKLGQRASDTAQIVFEEMELTPDLMLG 223

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   +E  +I I    A  +V   R + A A+ YA  R   G  L     + 
Sbjct: 224 REGDGLRIALANLEGGRIGI----AAQAVGMARAAFAAALAYAGERETFGQKLTGHQAVA 279

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  L    A   D  +   +EAA A++ A        +MA AV ++A+
Sbjct: 280 FRLADMATRIEAARLLVLNAARLRDAGQPCLKEAAMAKLFA-------SEMAEAVCSDAI 332

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + + YR+     I  G+ +
Sbjct: 333 QIHGGYGYLADYPVEQIYRDVRVCQIYEGTSD 364


>gi|297585456|ref|YP_003701236.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297143913|gb|ADI00671.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 380

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D A++ +  +K  D  Y L+G K W  +   +D +I+ A+ +   G   +
Sbjct: 123 FALSEPGAGSDAASLRTTAKKDGDH-YILNGSKAWITNGGYADTYIVFAKTDPDAGKKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVST 306
              + +    G      + K+G   ++T  L F +              G+ +   N+  
Sbjct: 182 TAFIVEKDTPGFTVLAKERKMGLLGSSTTGLAFEDCRIHESRRLGEEGQGYTIALSNLDY 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G V           A  ++     +L  A  YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 242 GRV---------GIAAQALGIAEAALEHATDYAKERKQFGKPIAMQQGLAFKLADMATAV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++  AN  D+  +   EA+ A+  A  T       A  V  EA++  GG GY +
Sbjct: 293 EAAKLLTYSAANRKDQGLTTGIEASMAKTFASDT-------AMKVTTEAIQVFGGYGYTK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 346 DYPVERFFRDAKVTQIYEGT 365


>gi|167644103|ref|YP_001681766.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346533|gb|ABZ69268.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 43/300 (14%)

Query: 175 APKIF--SREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP IF    E       P   T   +G + +TE   G+D+  I S  + + D  Y ++G 
Sbjct: 103 APYIFHYGTEEQKQRWLPRLCTGELVGAIAMTEPGAGSDLQGIKSSAKVVGDQ-YVINGS 161

Query: 232 KWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           K F+++  +   I++        G  G  L+  ++E     G    R  +K+G+ +  T 
Sbjct: 162 KTFITNGQTANLIIVVVKTDPTAGARGTSLI--VVETDGAEGFERGRNLDKLGHEAQDTS 219

Query: 288 ELEFSNT---------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           EL F++                F  L+G L     P E + I      A+  ++ +  +L
Sbjct: 220 ELFFNDVKVPTENLLGSDEGQGFFQLMGQL-----PQERLNI------AVQGMATIERAL 268

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              I Y ++R   G  +ID    +  +A+   +   A        N   E   + E  A 
Sbjct: 269 ELTIDYVKQRKAFGKAIIDFQNTQFVLAECKTEATVAKVF----VNHCIERHLKGELDAA 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              MA   KYW   +   ++   ++  GG G++ E  IAR YR+S    I  G+   M L
Sbjct: 325 TASMA---KYWVSDLENKIVDRCLQLFGGYGFMNEYPIARMYRDSRVQRIYGGTNEIMKL 381


>gi|110347269|ref|YP_666086.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110287445|gb|ABG65503.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 381

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 30/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246
           P+    + +   LTE   G+D+  + ++  +   G + L G K F+S      FI++   
Sbjct: 112 PVVSGELTVAYALTEPDAGSDLGGLKTRASRTGAG-WVLRGAKQFISGADYADFIIVLAV 170

Query: 247 ----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR-------SNATVELEFSNTF 295
               A +  R   F+VPR     S  G  Y     K+G R       S    EL  S+  
Sbjct: 171 TDLAAPLRSRFTLFIVPR-----SNPGFKYSGNFRKMGWRGYQLGAFSLEDCELPESHVL 225

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G + G        +   +I        M+   +R+    A +Y R R   G  L D   +
Sbjct: 226 GEVGGGFAAMMATINTTRIEYSARYVGMADELLRL----ARNYVRERQAFGSRLADHQAI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD   ++ A+  L++R A   DE           R+    +K +  +M   V    
Sbjct: 282 QFMLADSDCEVEASRLLTYRAATLADEGDPSF------RVAGSRSKLYASEMVGRVADRV 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG+GY+ +  + R YR++ A  I  G+
Sbjct: 336 LQIFGGAGYMCDWPVERMYRDARAFRIGEGT 366


>gi|330825434|ref|YP_004388737.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329310806|gb|AEB85221.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254
           LTE   G+D A+I ++ + +  G Y ++G K F+S   S   ++L    G        + 
Sbjct: 124 LTEPGSGSDAASIKTRAELVG-GEYVINGGKAFISGAGSTHVLVLMARTGDAQSGAAGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP  L      G+ Y + + K+G  S  T ++ F N     +   N+     E  KI
Sbjct: 183 AFAVPADLP-----GIHYGKKEEKMGWNSQPTRQISFDNV---RIPAQNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +LA A  Y + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQFKLADMATELIA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  RLA S  +A +R      A     + K +       V+ EA++  GG GYI E 
Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + R  R++  + IL G+   M
Sbjct: 349 PLERLLRDARVHQILEGTNEIM 370


>gi|313794157|gb|EFS42177.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA1]
 gi|315078300|gb|EFT50339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA2]
 gi|327457590|gb|EGF04245.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL092PA1]
          Length = 382

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|126728635|ref|ZP_01744450.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126710565|gb|EBA09616.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 379

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 34/266 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ QK ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAQKTNEG-YVLNGTKAFISGGGYSDAYVTMVRTGEDGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +EDG+P GL +   ++K+G RS  T +++F +       L+G         E+ K  
Sbjct: 183 --YIEDGTP-GLSFGAAEDKMGWRSQPTAQVQFDDCTIPHDNLIG---------EEGKGF 230

Query: 316 IY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            Y    LD   +++S   +  A+      + Y   R   G  +     ++  +AD+ +++
Sbjct: 231 RYAMAGLDGGRLNISACSLGAAQTALTLTLQYMSERKAFGQSIDQFQALQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     + A   D        A  A     + K +  +     + + ++  GG GY+ 
Sbjct: 291 QAARTFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSRTVDQCLQLHGGYGYLA 344

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           +  I +  R+   + IL G+   M L
Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIMRL 370


>gi|50084817|ref|YP_046327.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530793|emb|CAG68505.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 408

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 124 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 182

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    EG VG  +   +LE G  +GL    +  K+G R++ T E+   N
Sbjct: 183 SPIADVFVVWAKEVSSEGHVGE-IRGFILEKGW-DGLSAPAIHGKVGLRASITGEIVMDN 240

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 241 VFVPEENAFPEVRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTARQYTLDRKQF 294

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +I+    ++ R     DE  +  E  +       + K   C
Sbjct: 295 GRPLAANQLIQKKLADMQTEISLGLQVALRFGRMKDEGIAAVEGTS-------LIKRNNC 347

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   A + +GG+G  +E  +ARH
Sbjct: 348 GKALEIARLARDMMGGNGISDEFGVARH 375


>gi|145221034|ref|YP_001131712.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145213520|gb|ABP42924.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 611

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 47/289 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + L G K F+++  +D        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDADDLFENIVHVVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F+VP+   D      G  NG+    L++K+G +++AT EL F        G+L+
Sbjct: 224 TKGLSLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351
            D +  +G  +  K++ Y  +     +++ +      A+ YA+ R + G  +I       
Sbjct: 284 NDTH--SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTR-IQGADMIQMTDKTA 340

Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI---MA 397
                   P ++RA+           AL    A   D    +  S ++ A   R+   + 
Sbjct: 341 PRVTIMHHPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           PI K    + A   + E+++  GGSG++++  + ++ R++  +S+  G+
Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGT 449


>gi|313813966|gb|EFS51680.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA1]
          Length = 382

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|289756310|ref|ZP_06515688.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium
           tuberculosis EAS054]
 gi|289696897|gb|EFD64326.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium
           tuberculosis EAS054]
          Length = 537

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 90  LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 149

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  + VP+ L   E G P   NG+    +++K+G + +AT EL F        G+L+
Sbjct: 150 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 209

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 210 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 264

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 265 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 325 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 375


>gi|302518153|ref|ZP_07270495.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
 gi|318060019|ref|ZP_07978742.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318077639|ref|ZP_07984971.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
 gi|302427048|gb|EFK98863.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
          Length = 389

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P     + I   LTE   GT  A IT+   +  D  Y LSG K  ++  +  D +++ A+
Sbjct: 110 PSITGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           VEG  G       LVPR     +  G+  +   N +G        L F  T       LG
Sbjct: 168 VEGSAGHEGTVALLVPR-----NAPGVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLG 222

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
               + G   D+ +  +L  + +SV+   V LAE     A+ YAR R   G  L  +  +
Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+ A DI AA  L    A  F+E    +E+A+    MA   K     M   V  +A
Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEEG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY + + I R YR++ A     G+
Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363


>gi|213961958|ref|ZP_03390223.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno]
 gi|213955311|gb|EEB66628.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 49/303 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG  G+TE   G+D   + +   K  D  + L+G K
Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WVLNGTK 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F++   S    ++    G  G       F V R        G    + +NK+G R++ T
Sbjct: 155 NFITHGKSGDIAVVIARTGEKGDKHGITAFAVER-----GTKGFSAGKKENKLGMRASET 209

Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
            E+ F +     + D N    V  G ++ MKIL   D   +S+  + + +A+     ++ 
Sbjct: 210 AEMIFQDC---RIPDTNRLGAVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  LID   +   +AD+A +I A+  L  + A      K+  +    +  MA
Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQ----KNNGQRVTLSGAMA 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  ++   V  EA++  GG GY ++  + + +R+S   +I  G+     L +   
Sbjct: 320 ---KMYSSEVCVRVATEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVITRQ 376

Query: 458 LEK 460
           ++K
Sbjct: 377 IDK 379


>gi|124003158|ref|ZP_01688008.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123991256|gb|EAY30687.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 392

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 17/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCF 256
           L ++E  GG+D+A + +   +  D  Y ++G K F+++ +S  FI+ A     + + G  
Sbjct: 125 LAISEPFGGSDVAGMRTTAVREGDH-YIINGSKTFITNGVSSDFIVAAVKTNPDAKSGG- 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  ++ D    GL   +L NK+G R++ T E+ FS+       LLG  N     +    
Sbjct: 183 -ISMIVIDRDTPGLTATKL-NKLGWRASDTGEIAFSDVKVPVTNLLGGENQGFYYIMQHF 240

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  AI  ++    +L   + Y   R   G  +     ++  +A +A +I       
Sbjct: 241 ALERLMLAIGGMATADYALEVTLKYMDEREAFGRKINRFQALRHRVAQMASEIEMNRMFI 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A+ + +     +EAA A+++         +++  V+ + ++  GG G++E+  +AR 
Sbjct: 301 YAIADRYQQGDYVVKEAAMAKLLG-------TQLSDRVVYDCLQMFGGYGFMEDYPLARM 353

Query: 434 YRESPANSILLGSGNAM 450
           YR+S   +I  G+   M
Sbjct: 354 YRDSRLGTIGGGTSEIM 370


>gi|226308416|ref|YP_002768376.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187533|dbj|BAH35637.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 21/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-------AQVEG 251
           + +TE   G+D+A I +  +   DG  Y L+G K F++  +    I++          + 
Sbjct: 124 IAMTEPGAGSDLAGIKTTARLSGDGSHYMLNGSKTFITGGVQADLILVVARTSPAGDADR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R G  +   L  D +  G    R   K+G R+  T EL F++       LLG+     G 
Sbjct: 184 RAGLSI---LCVDTTSEGFSVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +    +   L +A+ S +    ++  A  Y + R V G  +      K  +A+ + ++AA
Sbjct: 241 LTRNLVRERLGAAVGSYANASAAIEFATAYVKEREVFGTPVAQFQNTKFVLAECSAEVAA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A   R  +  DE +  +   A ARI     K +C +MA  VI + ++  GG GY+ E 
Sbjct: 301 AQAAVDRALD-LDEIRELTVADA-ARI-----KLFCTEMAGRVIDKCLQLHGGYGYMREY 353

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I+R Y ++  N I  GS   M
Sbjct: 354 PISRLYADTRVNRIYAGSSEVM 375


>gi|92118071|ref|YP_577800.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91800965|gb|ABE63340.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L G K F+S +  SD ++++ +  G     +   
Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDH-YMLDGQKQFISGAGASDLYVVMVRTGGDGPGGISTL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
           ++E  +P G+ +   + K+G  +  T  + F N        LGD  +        KI + 
Sbjct: 183 VVERDTP-GVSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIG------FKIAMA 235

Query: 317 YLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +++S     G + +L +A+ Y + R   G  L +   ++  +AD+A ++ AA  
Sbjct: 236 GLDGGRLNISACSLGGAQSALDKALAYMKERKAFGKRLDEFQALQFKVADMATELEAART 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             +R A + D       E   A ++  + K +   +   V  +A++  GG GY+ E  I 
Sbjct: 296 FLWRAACALD------REDTDATMLCAMAKRFATDVGFEVANQALQLHGGYGYLSEYGIE 349

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  R+   + IL G+   M L V   L +G
Sbjct: 350 KIVRDLRVHQILEGTNEIMRLIVSRKLIEG 379


>gi|264676529|ref|YP_003276435.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207041|gb|ACY31139.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 387

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
             L+E   G+D+AA+  + +   D  Y ++G K W  +  ++D +++  +     G   L
Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAAGSRGL 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E G+P     +R+ N I    +    L+FSN       L+G      G    M+ 
Sbjct: 189 SALIVEAGTPGFEIAERI-NVIA--PHPLARLKFSNCRVPAAQLVG--AAGEGFKVAMRT 243

Query: 315 LIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +++ + S G  R ++ EA+  A  R + GG+L D  + +  +A +A  I +A  L
Sbjct: 244 LDVFRTSVAAASLGFARRAMDEALQRATSRKMFGGVLADFQLTQAKLAQMATQIDSAALL 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D+ ++ + EAA A++ A        + A  VI  A++  GG G + E+ + R
Sbjct: 304 TYRAAWLRDQGENVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGVVSEQPVER 356

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 357 LYREIRALRIYEGA 370


>gi|21221225|ref|NP_627004.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|7544038|emb|CAB87211.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 385

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 45/274 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251
           + +TE   G+D+A + S  +   DG  Y L+G K F++  + +D  I+ A+ +       
Sbjct: 124 IAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTDAPTAEDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L      D    G    R  +K+G R++ T EL F         D+ V   PVED
Sbjct: 184 RHGISL---FAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229

Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356
           +     K   YL   + S       G       A+ +A++ +V    +  +PV      K
Sbjct: 230 LLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQDRTVFGKPVAHFQNTK 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A    ++ AA A+  R   + D  +    EAA A++       +C ++A  VI   +
Sbjct: 289 FELAACQAEVDAAEAVVDRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCL 341

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|332141089|ref|YP_004426827.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551111|gb|AEA97829.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 389

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +  F++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLKAEKRGDK-YILNGNKMWITNGPDAHTFVIYAKTDPNAGPKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G RS+ T EL F +     +   N+     E +++L+  
Sbjct: 189 TAFIVERDFPGFSRAQKLDKLGMRSSNTCELVFEDC---EVPAENILGKEGEGVRVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  +    +++  +AD+   + AA A 
Sbjct: 246 LDYERLVLSGGPLGIMQSCMDIVVPYIHDRQQFGQSIGQFQLIQGKVADMYTQMNAARAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 306 VYTVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINEYPTGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|302559586|ref|ZP_07311928.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302477204|gb|EFL40297.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 608

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+ L D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKHLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPI 399
                 P ++R++           AL    A+  D    +      AR       ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLHTASVQDAIALKEAAGEDARTEHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  +     +A++++  GGSG+++E  I ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447


>gi|305665430|ref|YP_003861717.1| acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
 gi|88710185|gb|EAR02417.1| Acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
          Length = 392

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + + ++ + + D  Y L+G K W  +SP +D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPNHGSNPSGMETKFKDMGDH-YLLNGAKLWISNSPFADIAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G        K   R++AT EL F N     +   N+  G       L  
Sbjct: 195 VERGME-----GFSTPETHGKWSLRASATGELIFDNV---KVPKENLLPGKNGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  L
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLL 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +FRL    +E K+ + + + A       K     MA  +  EA + +GG G   + SI R
Sbjct: 307 AFRLGQLKNEGKATTAQISMA-------KRNNVDMAIKIAREARQVLGGMGITGDYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|329935741|ref|ZP_08285546.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329304832|gb|EGG48705.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 608

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG+    +++K+G + + T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKVSNTCEMTFGDKHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA+ R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKSAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPI 399
                 P ++R++           AL    A+  D       + +  S E A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDAIQVKEADGEDASAEHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + A   +A++++  GGSG+++E  + ++ R+S  +++  G+
Sbjct: 401 VKGYGSEKAYEQLAQSLQTYGGSGFLQEYPVEQYIRDSKIDTLYEGT 447


>gi|323140382|ref|ZP_08075312.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067]
 gi|322415138|gb|EFY05927.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 34/273 (12%)

Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG----- 254
           LTE   G+D   ++++      +G Y L+G K F+++  +++ F++ A      G     
Sbjct: 124 LTEPGAGSDAGGVSTRAVHNKEEGTYTLNGTKMFITNGGLAEIFLVFANTRKTGGIRGLT 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            F+VP+     +P G    + +NK+G R + T EL   +      + +G         E 
Sbjct: 184 AFIVPK----DTP-GFSVGKKENKMGIRPSNTTELVLQDVVIPESYRVGREG------EG 232

Query: 312 MKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +I +  LDSA   V  + V +A+A     + YA+ R   G  +    +++  +AD+A+ 
Sbjct: 233 FRIAMNTLDSARPFVGAVSVGIAQAALDCAVKYAKERRQFGQPIASFQMVQGMLADMAMK 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A  +  +     D+    S+EAA A       K +    A  V  +A++ +GG GY 
Sbjct: 293 VETARLMVQKACWMRDQGMEFSKEAAMA-------KCYAADTAMQVTTDAVQVMGGYGYT 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +E  + +  R++    I  G+     L + N L
Sbjct: 346 KEYPVEKMMRDAKIMQIYEGTNQIQRLVIANKL 378


>gi|262281091|ref|ZP_06058873.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257322|gb|EEY76058.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 593

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 85/405 (20%), Positives = 160/405 (39%), Gaps = 55/405 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +   ++   +    + + PKI+S E+  T             + LTE   GTD+  I
Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262
            ++ +   DG Y ++G K F++   +D       ++LA+          +  F+VP+   
Sbjct: 178 KTKAEPNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYFV 237

Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            EDGS    N +    +++K+G +++AT  + F    G+L+G  N     +  M     L
Sbjct: 238 NEDGSLGERNLVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365
              I  +     +   A  YA  R               +  IL+   V +R + ++  +
Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSALGVQSPNKPADSILVHGDV-RRMLLNVRAN 356

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419
             A+ A +  +    D  K  ++  A  +      ++ PI K +    A     +A    
Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478
           GG GYI E  + +  R+     I  G+      D++     K    F   + T  +D  +
Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476

Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518
                +  ++D ++    E + + +F+ E+ A      +SAA  Y
Sbjct: 477 DLDTDLNFIKDATLDAVTEIEAITQFIIEQAAENVDFPNSAAVDY 521


>gi|259419059|ref|ZP_05742976.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member
           8) [Silicibacter sp. TrichCH4B]
 gi|259345281|gb|EEW57135.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member
           8) [Silicibacter sp. TrichCH4B]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D A++ ++  + ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAASLKTRAARDNEG-YVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +EDG+P GL +  L++K+G +S  T +++F +     G L+G+     G    MK L
Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGE--EGHGFKYAMKGL 237

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+ A  S+   +  L+  + Y   R   G  +     ++  +AD+ +++ AA    
Sbjct: 238 DGGRLNIAACSLGAAQAGLSATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D+ +  + +         + K +  +    V+ + ++  GG GY+ +  I + 
Sbjct: 298 RQAAWKLDQGEPDASK------FCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKL 351

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 352 VRDLRVHQILEGTNEIM 368


>gi|197118510|ref|YP_002138937.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197087870|gb|ACH39141.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 592

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 48/360 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +     +DG  Y L+G K F ++  ++  + + A+V+      FLV
Sbjct: 147 LTEPDSGSDALGAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R  E     G+     + K+G + ++T ++   N       +LG+  +  G      +L
Sbjct: 207 ERGFE-----GVSVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGE--IGKGHKIAFNVL 259

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  + +LA+ I YA  R   G  +     +K  IAD+   + AA +
Sbjct: 260 NVGRFKLGAAVTGAA--KGALADGIKYANLRKQFGRTIGSFGAIKEKIADMTSAVFAAES 317

Query: 372 LSFRLA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +RLA               N +D  +   EE A   +   + K +C ++   V  E +
Sbjct: 318 MVYRLAGLIDQRLATIPRDTPNYYDVYQRAIEEYA---MECAVAKVFCSEVLAFVADEVV 374

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQ 474
           +  GG G+++E    R+YR+   N I  G+      ++  LL  GT L   +     L+Q
Sbjct: 375 QIHGGYGFVQEYPAERYYRDERINRIFEGTN-----EINRLLVPGTLLARAMKGEIPLQQ 429

Query: 475 DLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           +   + + ++T     L DS+    E   LA      + LA SAA  ++A + +  +V L
Sbjct: 430 EALKAFESLMTPSFEELDDSVPFAAEKALLAGLKQAFLVLAGSAAQKFQAAVKEEQEVLL 489


>gi|126652586|ref|ZP_01724750.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905]
 gi|126590577|gb|EAZ84694.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905]
          Length = 378

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 27/282 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  ++  +  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGND-YILNGSKIFITNGGVADTYIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +          ++E G   G    + + K+G RS+ T E+ F N     +   N+    
Sbjct: 172 TDPEAKNGTSAFIVEAGY-EGFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENLLGAE 227

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD     ++   V +A+     A+ YA+ R   G  +     +   +AD+
Sbjct: 228 GEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGVSFKLADM 287

Query: 363 ALDIAAATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           A  I A+  L+++ A    N+    K+    +A A++MA  T       A +V  EA++ 
Sbjct: 288 ATQIEASRLLTYQAAWLESNNLPYGKA----SAMAKLMAGDT-------AMSVTTEAVQV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378


>gi|325523056|gb|EGD01469.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 383

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D A++ +   +  D  Y ++G K F++ +P +  F ++A+        G 
Sbjct: 122 FALTEPEAGSDAASLRTTAIRDGDD-YVVNGTKRFITNAPHAGIFTLMARTNPDDKGSGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V     D    G+ + +   K+G +   T ++ F N       L+G      G  
Sbjct: 181 ISAFIV-----DAKSPGISFGKRDKKMGQKGAHTCDVIFDNVRVPAANLIGGKE-GQGFK 234

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + ++ + V++AE     A+ YA  R   G  + D  +++  +AD   
Sbjct: 235 TAMKVL---DKGRIHIAAVCVAVAERMLSMALAYAMERKQFGKPIADFQLVQAMLADSKA 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  +    A   D+    S EA+ A++ A        +M   V   A++  GG+GY
Sbjct: 292 EIYAARCMVLDAARRRDDKLPVSTEASCAKLFA-------SEMCGRVADRAVQIFGGAGY 344

Query: 425 IEERSIARHYRE 436
           + E +I R YR+
Sbjct: 345 MAEYAIERFYRD 356


>gi|322488322|emb|CBZ23569.1| putative acyl-coenzyme a dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 416

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 23/252 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  +++ + +LA+ EG    F+V  
Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGPVEDMKILI 316
              D    G+   + +  +G R + T  + F N    ++   NV      G    MK   
Sbjct: 221 ---DADTPGVTLGQKEMMLGQRCSDTRGITFENV---VVPQENVVGEAGKGFQVAMKAFD 274

Query: 317 YLDSAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  SA+ +S  G+ R +  EA  YAR R   G  +     +   +A++A  + A   +++
Sbjct: 275 FTRSAVAISAVGLARRATDEATKYARERMTMGKPIAQHQGVAFMLAEMAAGVEACRLMTY 334

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R     D+ +  +  A+ A++MA         +A      A++  GG+GY     + + Y
Sbjct: 335 RAGWETDQGRRNTYYASCAKMMAS-------DLAEKCSTNAVQIFGGNGYNAGYPVEKLY 387

Query: 435 RESPANSILLGS 446
           R+    SI  G+
Sbjct: 388 RDCKIFSIYEGT 399


>gi|167720971|ref|ZP_02404207.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           DM98]
          Length = 395

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPVIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               +L  +    GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|167745777|ref|ZP_02417904.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662]
 gi|317470509|ref|ZP_07929897.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167654808|gb|EDR98937.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662]
 gi|316902024|gb|EFV23950.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD + + +    + DG  Y L+G K F + S  +D FI+ A  +   G   
Sbjct: 124 FGLTEPGAGTDASGVKTSA--VLDGDHYILNGQKVFTTNSGFADTFIIFALTDKSAGTRG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + D +  GL   +   ++G R+ +  E+   +     +   NV  G  +  KI + 
Sbjct: 182 MSAFIVDRNTPGLEVSKNIPRMGIRAASNCEVALVDV---RVPKENVIAGEGKGYKIAMS 238

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +     SV   + +L EAI Y + R   G  +      +  IA++ + I AA  
Sbjct: 239 ALAGGRIGIGAQSVGIAQGALDEAIKYVKERKQFGKPIAKFQNTQFLIAELQVKIDAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +R A      K++ +   YA + A   K +   +A  V   A++ +GG GY  E  + 
Sbjct: 299 MVWRAA------KAKDDHENYAPLAAS-CKLFASDVAVEVTRAAVQLLGGYGYSREYPVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R YR++    I  G+  AM + V
Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374


>gi|21717403|dbj|BAC02934.1| acyl-CoA dehydrogenase A [Acinetobacter sp. M-1]
          Length = 622

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 102/497 (20%), Positives = 195/497 (39%), Gaps = 68/497 (13%)

Query: 71  QELARMANYNTPQLHAYG-PGGERWDKVE-FHPAWHALLRRSIHDGLHCSI-----WDRS 123
           +E+A+ A   T  L+  G   G RW+  E F PA      R   DG    +     W   
Sbjct: 44  EEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKEAFRQYADGGWIGLGADEEWGGQ 103

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSR 181
             P +      +      ++       ++ P ++  + +AL +  +    + + PKI+S 
Sbjct: 104 AMPKM------LTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKETYLPKIYSG 157

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K F++   +D
Sbjct: 158 EWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKIFITGGDND 204

Query: 242 -----AFIMLAQVEGR------VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA+          +  F+VP+ L  ED   G  N +    +++K+G +++A
Sbjct: 205 LAENIIHLVLAKTPDAPAGSRGISLFIVPKFLLNEDRSLGERNPVGPGSIEHKMGIKASA 264

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RR 341
           T  +      G+L+G  N     +  M     L   I  +     +   A  YA    + 
Sbjct: 265 TCVMNSDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQYATDRLQG 324

Query: 342 RHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           R  +G    ++P         ++R + ++  +  A+ A +  +    D  K  ++  A  
Sbjct: 325 RSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKFSTDAEAVK 384

Query: 394 R------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +      ++ PI K +    A     +A    GG GYI E  + +  R+     I  G+ 
Sbjct: 385 QANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRIAQIYEGTN 444

Query: 448 NAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKEDKGLARFLT 505
                D++     K    F   + T  +D  +     +  ++D ++    E + + +F+ 
Sbjct: 445 GVQSQDLIGRKTIKCGGAFIAEYITEIRDFANDLDTDLNFIKDATLDAATEIEAITQFII 504

Query: 506 EKIA----LASSAAALY 518
           E+ A      +SAA  Y
Sbjct: 505 EQAAENVDFPNSAAVDY 521


>gi|317472841|ref|ZP_07932151.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316899683|gb|EFV21687.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 383

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252
            GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A     +  GR
Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIIEKRGR 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
               +   +++ G+P G  +   + K+G R ++T EL F +       LLG      G  
Sbjct: 181 KLKEISAFIVDKGTP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKENLLGKQGKGFGIA 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + ++   + LAE      I Y + R   G  +      +  +AD+A 
Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALEATIEYVKERKQFGRTIGQFQNTQFQLADMAT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L ++ A +    K  S EAA A++       +  ++A  V  +A++  GG GY
Sbjct: 295 KVEAAKLLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E  + R  R++    I  G+
Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369


>gi|313803279|gb|EFS44475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA2]
 gi|313839189|gb|EFS76903.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL086PA1]
 gi|314964053|gb|EFT08153.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA1]
 gi|327334391|gb|EGE76102.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL097PA1]
          Length = 382

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|313672317|ref|YP_004050428.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939073|gb|ADR18265.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 588

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 146/354 (41%), Gaps = 36/354 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L+G K W  ++  +D F + A+V+ +    FL+
Sbjct: 143 LTEPGSGSDALGAKTSAVLSDDGKYYILNGTKQWITNAGFADIFTVFAKVDKQHFTAFLI 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R     +P GL +   + K+G + ++T ++   N       +LG++        ++  +
Sbjct: 203 ER----NTP-GLSFGAEEKKMGIKGSSTRQVILDNVKVPVENVLGEVGKGHKIAFNVLNV 257

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A       + +LAE I YA  R     ++     ++  I+D+     A+ +L +R
Sbjct: 258 GRFKLAAAVTGAAKYALAEGIKYANVRKQFDRLISSFGAIQEKISDMTAYTYASESLIYR 317

Query: 376 LANSFDEAKSR-------------SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           LA   D A ++              E   YA I   I+K +C  +   V+ E ++  GG 
Sbjct: 318 LAGLLDNALNKIDPSLPNYYEIYQKEIEEYA-IECSISKVFCSDVLALVVDETLQIFGGY 376

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQDLGSSG 480
           G+ +E    R YR+   N I  G+      ++  LL  G  L   +     L Q+   + 
Sbjct: 377 GFSQEYPAERFYRDERINRIFEGTN-----EINRLLIPGMMLRRAMKGEIPLTQEAMKAV 431

Query: 481 KKVITILRDSIS----LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +++T   D I       KE   L    T  + LA SA   Y   +N+  +V L
Sbjct: 432 NQLMTPSFDEIDESTPYAKEKYTLNNLKTIYLILAGSAVQKYMNNINEQQEVLL 485


>gi|302876744|ref|YP_003845377.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307687422|ref|ZP_07629868.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302579601|gb|ADL53613.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 377

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 30/262 (11%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
           AIG   LTE R G+D  +I  +   ++DG  Y ++G K W     ++D FI+ A+ E + 
Sbjct: 118 AIGAFALTEPRIGSDAKSI--EATAVADGDDYVINGKKKWITMGQIADFFILFAKCEDKP 175

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V +        G   + +   +G R++   EL   N       L+G +      V 
Sbjct: 176 TAFIVEK-----DRVGFSKKPMSGLLGVRASMIAELTLENCRIPKENLVGRIGTGLSHVA 230

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
               L  LD    SV+   V +A+A     + YA+ R      +    ++++ I ++ ++
Sbjct: 231 ----LSCLDYGRYSVACGCVGVAQAALEDSLRYAKERQQFNSTINGNQLIQKMITEMVVN 286

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGY 424
           I AA  L ++     D     S       IM   + KY+   M   + ++A++  GG+G 
Sbjct: 287 IKAARQLYYKAGYLKDICDPDS-------IMETWVVKYFASTMLTKITSDAIQIHGGNGV 339

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + R++R++  N I+ G+
Sbjct: 340 SNEYRVERYFRDARVNEIIEGT 361


>gi|78224497|ref|YP_386244.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78195752|gb|ABB33519.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 35/270 (12%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           ++++   L  TE   G+D+ A+ ++  +  D  Y ++G K F+++  ++D  ++ A  + 
Sbjct: 115 ESTLLTALAATEPAAGSDLLAMKTRAVRQGDK-YVINGQKCFITNGSVADVIVVYAYTDP 173

Query: 252 RVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             G   +   ++E G+P GL Y R ++K+G R +   EL F N        + V   P E
Sbjct: 174 EKGSKGISAFVVEKGTP-GLVYGRNESKMGMRGSINSELFFEN--------MEV---PAE 221

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA--- 358
           ++          ++  L +  +  +   V +A+       RH    +   +P+   A   
Sbjct: 222 NIIGAEGTGFANLMQTLSTNRVFCAAQAVGIAQGALDIAVRHTQDRVQFGKPIAHLAPVQ 281

Query: 359 --IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + A+  L+ + A   D+   +      A +   + K      A  V  +A+
Sbjct: 282 FMVADMATAVEASRLLTRKAAELLDDGDKK------AVLYGSMAKTMASDTAMRVTTDAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GGSGY++E  + R  R++    I  G+
Sbjct: 336 QVLGGSGYMKENGVERMMRDAKLTQIYTGT 365


>gi|158424457|ref|YP_001525749.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331346|dbj|BAF88831.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 390

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 36/281 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMRTRAEKKGD-RYILNGSKMWITNGPIAETLVVYAKTDPAAGARGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV       
Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGQVGRGVNV------- 242

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD     ++G  + + +A     I Y   R   G  +    +M+  IAD+ + +
Sbjct: 243 --LMSGLDYERAVLAGGPIGIMQACMDVVIPYVHERKQFGQPIGTFQLMQGKIADMYVAM 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  A  + +A + D   +  E+AA A ++A     W          EA++ +GG+GYI 
Sbjct: 301 NSVKAYVYAVAKACDRGLTTREDAAGAILIAAEKATWMA-------LEAIQTLGGNGYIN 353

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +    R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 DYPTGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEK 388


>gi|160888726|ref|ZP_02069729.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492]
 gi|270293508|ref|ZP_06199710.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479525|ref|ZP_07938656.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp.
           4_1_36]
 gi|156861625|gb|EDO55056.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492]
 gi|270274975|gb|EFA20835.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316904345|gb|EFV26168.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp.
           4_1_36]
          Length = 568

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ +   D  K+              R E+  YA++     P+ K    + A     
Sbjct: 347 SLLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADAFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|119183636|ref|XP_001242828.1| hypothetical protein CIMG_06724 [Coccidioides immitis RS]
          Length = 430

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + S  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N        +K+L+    L+  ++S      M+ +L   + Y   R     
Sbjct: 261 PKENILGAVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +A + A ++  A   D + +  E              +  + 
Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|327301089|ref|XP_003235237.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326462589|gb|EGD88042.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 431

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ ++ + + DG + L+G K W  +
Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T EL F + F 
Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N      + +++L+    L+  ++S      M+  L   + Y   R   G 
Sbjct: 262 PHANVLGQIN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D++   S+              +  + 
Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAISSDGTQVKTQDCAGAILYAAER 375

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414


>gi|319764491|ref|YP_004128428.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330826707|ref|YP_004390010.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119052|gb|ADV01541.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312079|gb|AEB86494.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 396

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 132 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G    +  +K+G R + T EL F +       +LG +N         K+L
Sbjct: 191 TAFLIEKSMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENVLGQVNGGA------KVL 244

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A 
Sbjct: 245 MSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + ++ +A + D      E     R        WC + A  +  E ++  GG+GYI E  
Sbjct: 305 RSFAYTVAKNLDMLGI--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 362

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 363 LGRLWRDAKLYEIGAGT 379


>gi|16125599|ref|NP_420163.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13422699|gb|AAK23331.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
          Length = 379

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ +   K+    Y L+G K F+S   +SD ++++A+  G     V  F
Sbjct: 124 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V + +E     GL +   + K+G  +  T ++ F N              GF    + +
Sbjct: 183 VVEKGME-----GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGL 237

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G          L+ A  S+ G + +L  A  Y   R+  G  L D   ++  +AD+A 
Sbjct: 238 DGG---------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +  R A++ D   S+  EA     MA   K +       V  +A++  GG GY
Sbjct: 289 ELEAARLMVRRAAHALD---SKHPEATKLCAMA---KRFATDAGFQVANDALQLHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++  + R  R+   + IL G+   M
Sbjct: 343 LQDYPLERLVRDLRVHQILEGTNEIM 368


>gi|307326307|ref|ZP_07605503.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887970|gb|EFN18960.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 379

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 24/257 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGC 255
           G  L+E + G+D AA+T +  K  DG        W      +D + + A+       + C
Sbjct: 124 GYSLSEPQAGSDAAALTCRADKAPDGYRITGAKAWITHGGKADFYALFARTGPGSDGISC 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F  P     G  +GL + R ++K+G  +  T    + +    LL    +     E ++I 
Sbjct: 184 FFAP-----GHTDGLTFGRPEDKMGLHAIPTTSAFWDDA---LLATDRLIGAEGEGLQIA 235

Query: 316 IY-LDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LDS  + V+     L       A  YA  R   G  +ID   +   +AD+A  + +A
Sbjct: 236 FSALDSGRLGVAACATGLAQAALDAATAYAHERTTFGRRIIDHQGLGFLLADMAAAVDSA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                  A   D A+ R     Y R  A + K      A  V  +A++  GG GY  +  
Sbjct: 296 R------ATYVDAARRRDHGRPYTR-QASVAKLTATDAAMKVTTDAVQVFGGYGYTRDFP 348

Query: 430 IARHYRESPANSILLGS 446
           + R+ RE+    I  G+
Sbjct: 349 VERYMREAKIMQIFEGT 365


>gi|295401420|ref|ZP_06811391.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976635|gb|EFG52242.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 594

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 131/313 (41%), Gaps = 49/313 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D FI+ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFIVYAKVDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R    G P G+     + K+G +S++T  L   +       LLG+  +  G V    IL
Sbjct: 210 ER----GFP-GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--IGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368
                   + +V G + +L   + YA +R         QP+ K        A +A  + A
Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFSLTQEKFATMASRLYA 317

Query: 369 ATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +  +R    FDE             K  ++  A   I   + K++  +    ++ E +
Sbjct: 318 TESSVYRTVGLFDERMGLLDEEKAKDGKEIAKSIAEYAIECSLNKFFATETLDYIVDEGV 377

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464
           +  GG G+++E  I R YR+S  N I  G+     L V            L LL+K   L
Sbjct: 378 QIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQL 437

Query: 465 FEQLFSTLEQDLG 477
            E+L     +++G
Sbjct: 438 QEELIMLAPEEVG 450


>gi|99080944|ref|YP_613098.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037224|gb|ABF63836.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +  G  G   +  
Sbjct: 124 LTEPGSGSDAAALKTRASRDNEG-YVLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGIST 181

Query: 261 L-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
           L +EDG+P GL +  L++K+G +S  T +++F +     G L+G      G    MK L 
Sbjct: 182 LYVEDGTP-GLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVG--QEGDGFKYAMKGLD 238

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+   +  L   + Y   R   G  +     ++  +AD+ +++ AA     
Sbjct: 239 GGRLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D+          A     + K +  +    V+ + ++  GG GY+ +  I +  
Sbjct: 299 QAAWKLDQGSPD------ATKFCAMAKKFVTETGSNVVDQCLQLHGGYGYLADYGIEKLV 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDLRVHQILEGTNEIM 368


>gi|221638920|ref|YP_002525182.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
 gi|221159701|gb|ACM00681.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
          Length = 385

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 138/307 (44%), Gaps = 41/307 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P     + PK+ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 101 NQIRLNGSPEQKASYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMRLKA 146

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  +G Y L+G K W  + P +D  ++ A+ +   G   +   L + S  G       +
Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
           K+G R + T EL F N    F  +LG         + +++L+  LD   + +SG     M
Sbjct: 206 KVGMRGSNTGELIFDNCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D  +    
Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYEAARACDAGRVTRA 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA   +       +  + A     +A++ +GG+G++ +  ++R +R+  A  + +G+G 
Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRD--AKLMEIGAGT 370

Query: 449 AMVLDVL 455
           + +  +L
Sbjct: 371 SEIRRML 377


>gi|157374597|ref|YP_001473197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316971|gb|ABV36069.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 389

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 138/308 (44%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   T   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLITGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F +     + + N+  G    +K+L+  LD   +
Sbjct: 195 RDSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251

Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +SG     M   +   I Y   R   G  +    +++  +AD+   + AA +  + +A 
Sbjct: 252 VLSGGPLGIMTACMDIVIPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R++ 
Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 365 LYEIGAGT 372


>gi|317498919|ref|ZP_07957203.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316893844|gb|EFV16042.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 20/263 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD + + +   K+    Y L+G K F + S  +D FI+ A  +   G   +
Sbjct: 124 FGLTEPGAGTDASGVKTTA-KLDGDHYVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGM 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              + D    GL   +   ++G R+ +  E+          N  G       ++ G +  
Sbjct: 183 SAFIVDRDSEGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALAG 242

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I I       SV   + +L EAI Y + R   G  +      +  IA +   I AA  
Sbjct: 243 GRIGI----GAQSVGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +R A + D+ ++ +  AA  ++ A         +A  V   A++ +GG GY  E  + 
Sbjct: 299 MVWRAAKAKDDHENFAPLAAQCKLFA-------SDVAVEVTRGAVQMLGGYGYSREYPVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R YR++    I  G+  AM + V
Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374


>gi|319653302|ref|ZP_08007404.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           2_A_57_CT2]
 gi|317395223|gb|EFV75959.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           2_A_57_CT2]
          Length = 402

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +       GLTE   G+D++A+ S   +  D  Y L+G K W      +D F++ A+
Sbjct: 114 PQAQGKQVGAFGLTEPNAGSDVSAMNSTAIRNGDS-YILNGSKSWISLCDAADNFLIFAK 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  +G   +   + +    G+  + +K K+G R+  T E+         L D+ V   P
Sbjct: 173 TEHDIGHKGISAFIVERKFPGVETKAIKGKLGIRAGNTGEV--------FLSDVRV---P 221

Query: 309 V--------EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
           V        E  KI +  LD+   +V+   V L EA     + Y   R   G  +    +
Sbjct: 222 VSNRLGEEGEGFKIAMSALDNGRFTVAAGAVGLIEASLEASLKYCHERKTFGKEIGRHQL 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ IA ++ ++  +  L F+     ++ K  ++E + A+ +A       C  A     +
Sbjct: 282 VQQMIAKMSANLEISRLLVFKSGWLKNQGKRNTKETSLAKWIA-------CNAAFEAAND 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  G  GY +E  + R  R S A  I  G+
Sbjct: 335 AVQIHGAYGYSDEYPVERFLRNSKAPVIYEGT 366


>gi|302526131|ref|ZP_07278473.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4]
 gi|302435026|gb|EFL06842.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4]
          Length = 376

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 25/271 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K         TE  GG+D+AA+ +   +  D  + ++G K F+S +  +D  I+ A 
Sbjct: 111 PIVKEDKRCCYAFTEPSGGSDVAAMRTTAARKGDD-WIINGTKTFISHAERADFVILFAT 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +  +G   V   L D    G    R    +G+      EL F +        LGD+   
Sbjct: 170 TDRTLGARGVTCFLVDIDTPGFTLSRPIPTMGDDWEP-FELAFDHCVVPDANRLGDVGGG 228

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                D      L    + ++  ++ +AE     A+ +A++R   G  L  +  ++  +A
Sbjct: 229 WALANDQ-----LTHGRLKIAAYQLGIAERCLDIAVEWAKQRVTWGKPLASRQAVQWMLA 283

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D A ++ AA  L +R A   DE +    EA  A++ A        +MA  V    ++ +G
Sbjct: 284 DSATELEAARWLVYRAAWLADEGRPVKTEAFKAKLCA-------TEMAQRVTDRCLQILG 336

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G GY +E  I   YR+     I  G G A +
Sbjct: 337 GLGYSKELPIQSFYRQVRVWRI--GHGTAEI 365


>gi|229494616|ref|ZP_04388379.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus
           erythropolis SK121]
 gi|229318978|gb|EEN84836.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus
           erythropolis SK121]
          Length = 611

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 137/318 (43%), Gaps = 56/318 (17%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA  I  R +  T             + LTE   G+D+ A  ++  K  DG + + G
Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192

Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRL------LEDGSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+        E G  NG+  
Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + +AT E+ F        G+L+G+++     + D+     +     +++ +
Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312

Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375
                 A+ YA++R V G  L                P ++R++A          A+   
Sbjct: 313 STGYLNALDYAKQR-VQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLY 371

Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   DE  ++      ++ A+    ++ PI K    + A   + ++++ +GGSG++++ 
Sbjct: 372 TAAHQDEVVAQLVSGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDY 431

Query: 429 SIARHYRESPANSILLGS 446
            I ++ R+S  +S+  G+
Sbjct: 432 PIEQYIRDSKIDSLYEGT 449


>gi|226304619|ref|YP_002764577.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183734|dbj|BAH31838.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 611

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 137/318 (43%), Gaps = 56/318 (17%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA  I  R +  T             + LTE   G+D+ A  ++  K  DG + + G
Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192

Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRL------LEDGSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+        E G  NG+  
Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + +AT E+ F        G+L+G+++     + D+     +     +++ +
Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312

Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375
                 A+ YA++R V G  L                P ++R++A          A+   
Sbjct: 313 STGYLNALDYAKQR-VQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLY 371

Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   DE  ++      ++ A+    ++ PI K    + A   + ++++ +GGSG++++ 
Sbjct: 372 TAAHQDEVVAQLVSGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDY 431

Query: 429 SIARHYRESPANSILLGS 446
            I ++ R+S  +S+  G+
Sbjct: 432 PIEQYIRDSKIDSLYEGT 449


>gi|126632707|emb|CAM56319.1| novel protein (zgc:55656) [Danio rerio]
          Length = 442

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 29/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGVKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E +     +   L D    G    R   K+G ++  T EL F +       LLG 
Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           +N      ++  P E + I      A+M ++       E+ +Y  +R   G  + D  V+
Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++  +I    A          E K  S  A+ A       KYW   +   V  + 
Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IA+ + ++    I  G+   M
Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430


>gi|228996565|ref|ZP_04156204.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|229004215|ref|ZP_04162016.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228757076|gb|EEM06320.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228763197|gb|EEM12105.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
          Length = 405

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+ A+ +   K  D  Y L+G K W     ++D F++ A+         +
Sbjct: 123 FGLTEPNAGSDVVAMQTTAVKQGD-YYVLNGSKTWISLCDVADHFLIFAKTNSELKHRGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
            CF+V R        G+  + +K K+G R+  T E+   E       LLG+        E
Sbjct: 182 SCFIVERTFP-----GVSTKAIKGKLGIRAGNTGEVFLDEVKVPAENLLGEEG------E 230

Query: 311 DMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD+   +V+      ++ SL  ++ Y   R   G  +    ++++ IA ++ 
Sbjct: 231 GFKIAMASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSA 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++  +  L ++     +E K  + E + A+ +A       C  A     +A++  G  GY
Sbjct: 291 NLEISRLLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + R+ R + A  I  G+
Sbjct: 344 SNEFPVERYLRNAKAPVIYEGT 365


>gi|184157703|ref|YP_001846042.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876388|ref|ZP_08444157.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209297|gb|ACC56695.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322508010|gb|ADX03464.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517598|gb|ADX91979.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735398|gb|EGJ66456.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 383

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V     D    G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +
Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|119471968|ref|ZP_01614253.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7]
 gi|119445226|gb|EAW26517.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7]
          Length = 391

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 123/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDADTLVIYAKTDLNAGAKGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +K+G R + T EL F N       +LG+LN      E +K+L
Sbjct: 191 TAFIVEKTFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
           +  LD   + ++   + + +A     + Y   R        D P+     ++  +AD+  
Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY
Sbjct: 300 QMNAARSYVYTVAKACDSGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E +  R  R++    I  G+
Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374


>gi|15597748|ref|NP_251242.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107102000|ref|ZP_01365918.1| hypothetical protein PaerPA_01003047 [Pseudomonas aeruginosa PACS2]
 gi|218891469|ref|YP_002440336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254235543|ref|ZP_04928866.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719]
 gi|254240984|ref|ZP_04934306.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192]
 gi|313107456|ref|ZP_07793644.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9948611|gb|AAG05940.1|AE004683_4 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126167474|gb|EAZ52985.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719]
 gi|126194362|gb|EAZ58425.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192]
 gi|218771695|emb|CAW27469.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310880146|gb|EFQ38740.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 375

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 30/282 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ + S+     LTE + G+D + + ++ ++  D  Y L+G K F++S      +++  V
Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                G+ G   F+VP         G    R+++K+G  ++ T +L F++        LG
Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  +V   R +   A  YA  R   G  +I+   + 
Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +          A S  E        A + K +  +MA  V + A+
Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG GY+++  + R YR+     I  G+ +   L +   L
Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|302342012|ref|YP_003806541.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301638625|gb|ADK83947.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 378

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 40/320 (12%)

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTE 204
           E GH+    V++A  V   M TP + +      F  EY   T   P     +   + +TE
Sbjct: 73  ELGHIAGMGVSTAICVQTHMATPAIAE------FGSEYLKETYLRPAIAGEMVSAIAVTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-----VGCFLV 258
              G+D+AAI ++ ++  D  Y ++G K ++++ + +D   +LA+          G F+V
Sbjct: 127 PDAGSDVAAIKTRARRDGDH-YLINGSKLYITNGVQADFLTLLARTSDEPGHHSFGLFVV 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
           P  L      G    +  +K+G RS+ T  L F +       L+G      G +  MK  
Sbjct: 186 PTNLP-----GFSVGKKLDKVGLRSSDTALLHFDDVPVPAQNLIG--QEGEGFIMQMKQF 238

Query: 316 IY-----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +     L SA+     M   +   + + R+R V G  L  + V++  + D   +I A  
Sbjct: 239 QHERFCTLPSAVTMCEDM---IKMTMEHLRQRVVFGKPLATRQVLRHRMVDWLTEIEALR 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++ +       +  + E +  ++MA        ++   V    ++  GG G+I E  I
Sbjct: 296 HLTYHIVRMKQAGQDATREVSMGKLMA-------GRLVRNVADGCVQMHGGMGFINETLI 348

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR +R+S   SI  G+   M
Sbjct: 349 ARCFRDSRVLSIGAGADEVM 368


>gi|296389023|ref|ZP_06878498.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 375

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 30/282 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ + S+     LTE + G+D + + ++ ++  D  Y L+G K F++S      +++  V
Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGTKQFITSGSHAGMVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
                G+ G   F+VP         G    R+++K+G  ++ T +L F++        LG
Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  +V   R +   A  YA  R   G  +I+   + 
Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +          A S  E        A + K +  +MA  V + A+
Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG GY+++  + R YR+     I  G+ +   L +   L
Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|134099668|ref|YP_001105329.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912291|emb|CAM02404.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 382

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           AIG L +TE  GG+D+A + +  ++  D +  ++G K F++S     F+  A   G  G 
Sbjct: 121 AIGALAVTEPGGGSDVAGLRTTAERDGDHL-VVNGAKTFITSGCRADFVTTAVRTGAPGA 179

Query: 256 FLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             +  L+ E G+P G    R  +K+G + + T EL F +       L+G  +     +  
Sbjct: 180 HGISLLVVERGTP-GFEVSRRLDKMGWQCSDTAELSFVDCRVPAANLVGAQDSGFVQIAQ 238

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +   +  A+ + +G + +L   + + R R   G  LI + +++  + ++A  +  A +
Sbjct: 239 HFLTERIMLAVQAYAGAQRALDLTVSWCRMRETFGRPLISRQLVRHTLVEMARKVDVARS 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
               +A           E  +A+  A     W       V+ +A++  GG+GY+ E  + 
Sbjct: 299 YVHDVARRHLAGDDVVAEVCFAKNTAVEAGTW-------VVDQAVQLHGGAGYMRESEVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R YR+     + +G G + VL  L    KG
Sbjct: 352 RQYRD--MRILGIGGGTSEVLAELAAKRKG 379


>gi|304317108|ref|YP_003852253.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778610|gb|ADL69169.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K       GLTE   GTD A    Q   + DG  Y L+G K F+++   +D +I+ A
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGSKIFITNGGKADIYIIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G    +++ K+G R+++T EL F +    ++   N+   
Sbjct: 171 MTDKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDC---IVPKENLLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +  LD   + ++   + +A+A     I YA+ R   G  +     ++  IAD
Sbjct: 228 EGEGFKIAMATLDGGRIGIAAQALGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I A+  L +  A         + EAA A++ A  T       A  V  + ++  GG
Sbjct: 288 MATRINASRWLVYNAAWRKQVGLPYTMEAAMAKLYASET-------AMFVTTKTVQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+ ++  + R  R++    I  G+
Sbjct: 341 YGFTKDYPVERFMRDAKITEIYEGT 365


>gi|226362136|ref|YP_002779914.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240621|dbj|BAH50969.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 389

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 24/252 (9%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250
           V     LTE   G++ A +T++   + DG + ++G K F++ +P++D F++ A+      
Sbjct: 121 VVASFALTEPEAGSNPAGLTTRA-VLKDGKWTINGTKRFITNAPLADLFVVFARTRPADE 179

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVST 306
               +  FLVP         G+       K+G     T E+ F +    G  L   +   
Sbjct: 180 TGTGIAVFLVP-----ADTAGVVVGPKDKKMGQEGAWTAEVAFDDVTVPGSALVGGSEEA 234

Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M  L    +  A ++V   + +L E++ +A      G  + D  +++  +AD  +
Sbjct: 235 GYRAAMTSLARGRVHIAALAVGSAQRALDESVAFAAVTKQGGTPIGDFQLVQAMLADQQV 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            ++A  AL    A  +   + R       RI   + K +C +MA  V   A++  GG+GY
Sbjct: 295 GVSAGRALVRDAAQKYVSGEDR-------RIAPSVAKLYCTEMAGKVADLAVQVHGGTGY 347

Query: 425 IEERSIARHYRE 436
           + +  + R YRE
Sbjct: 348 MRDVPVERIYRE 359


>gi|163751337|ref|ZP_02158563.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161328746|gb|EDP99893.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 385

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G+ G   +  +
Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGATELLVVMCRTGQDGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           +      G+ Y + ++K+G  +  T E+ F+        LLG+     G    MK L   
Sbjct: 183 VVPADAKGVTYGKAEDKMGWNAQPTREITFNQVRVPVTNLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ AI SV   + +L  A  Y + R   G  +     ++  +AD+A ++ AA  L  RL
Sbjct: 241 RINIAICSVGTAQAALERATQYMQERQQFGKPIATFQALQFKLADMATELVAARQL-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E +AY      + K +   +   V   A++  GG GY+ E  + R+ R+
Sbjct: 300 A-AFKLDCGDPEASAY----CAMAKRFATDVGFQVCDAALQLHGGYGYLREYPLERYVRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|84502592|ref|ZP_01000711.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84388987|gb|EAQ01785.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 387

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 127/266 (47%), Gaps = 26/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G       +K+G R + T EL F +    F  +LG+        + +++L
Sbjct: 187 TAFIIEKDMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M   L E + Y   R   G  + +  +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKIADMYTKMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A ++ +A + D  +   ++AA   +       +  + A  V  +A++ +GG+GY+ +  
Sbjct: 301 RAYTYEVAKACDRGEVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGYLNDNP 353

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + R +R+  A  + +G+G + +  +L
Sbjct: 354 VGRIFRD--AKLMEIGAGTSEIRRML 377


>gi|221234349|ref|YP_002516785.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|220963521|gb|ACL94877.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ +   K+    Y L+G K F+S   +SD ++++A+  G     V  F
Sbjct: 126 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVSAF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V + +E     GL +   + K+G  +  T ++ F N              GF    + +
Sbjct: 185 VVEKGME-----GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGL 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G          L+ A  S+ G + +L  A  Y   R+  G  L D   ++  +AD+A 
Sbjct: 240 DGG---------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +  R A++ D   S+  EA     +  + K +       V  +A++  GG GY
Sbjct: 291 ELEAARLMVRRAAHALD---SKHPEATK---LCAMAKRFATDAGFQVANDALQLHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++  + R  R+   + IL G+   M
Sbjct: 345 LQDYPLERLVRDLRVHQILEGTNEIM 370


>gi|167768658|ref|ZP_02440711.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1]
 gi|167710182|gb|EDS20761.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1]
 gi|291559739|emb|CBL38539.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
          Length = 380

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 20/263 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD + + +   K+    Y L+G K F + S  +D FI+ A  +   G   +
Sbjct: 124 FGLTEPGAGTDASGVKTTA-KLDGDHYVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGM 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              + D    GL   +   ++G R+ +  E+          N  G       ++ G +  
Sbjct: 183 SAFIVDRDSEGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALTG 242

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I I       SV   + +L EAI Y + R   G  +      +  IA +   I AA  
Sbjct: 243 GRIGI----GAQSVGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +R A + D+ ++ +  AA  ++ A         +A  V   A++ +GG GY  E  + 
Sbjct: 299 MVWRAAKAKDDHENFAPLAAQCKLFA-------SDVAVEVTRGAVQMLGGYGYSREYPVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R YR++    I  G+  AM + V
Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374


>gi|103488529|ref|YP_618090.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
 gi|98978606|gb|ABF54757.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 34/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y L+G K F+S +  +D ++ + +        +   
Sbjct: 126 LTEPGSGSDAAALKTTAKRDGDH-YVLNGTKQFISGAGYNDIYVCMVRTGEEKAKGISCL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306
           ++E  +P GL +   + K+G  ++ T ++ F +               F F +  L+   
Sbjct: 185 VVEKDTP-GLSFGAPEKKLGWNASPTAQVIFEDCRVPVENRVGAEGDGFRFAMAGLDGGR 243

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L+    S+ G +  L EAI Y R R   G  + D    +  +AD+A D+
Sbjct: 244 -----------LNIGACSLGGAQRCLDEAITYTRDRQQFGQPVADFQNTQFMLADMATDL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL +  A     AK  +     +R  A + K         ++ +A++  GG GY++
Sbjct: 293 EAARALLYMAA-----AKVTANAPDKSRFSA-MAKRLATDNGSRIVNDALQLFGGYGYLK 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454
           +  I R +R+   +SIL G+   M + V
Sbjct: 347 DYPIERFWRDLRVHSILEGTNQVMRMIV 374


>gi|83311123|ref|YP_421387.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82945964|dbj|BAE50828.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 554

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 31/300 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM----------LAQ 248
           LTE + G+D+  + +     +DG + +SG K F+S     ++   IM           A 
Sbjct: 158 LTEAQAGSDLGLVRTMASPQADGSWSISGGKIFISGGDQNLTGGQIMHLVLARTPDAPAG 217

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           V+G +  FL P  LEDGS N +   RL+ K+G  ++ T ++ F      ++G        
Sbjct: 218 VKG-LSLFLCPSHLEDGSRNAISVVRLEEKMGMHASPTCQVAFDGARAEIIGAPGEGLAR 276

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GG---ILIDQPVMKRAIA 360
           +  M     LD A+  V    V+L  ++ YA  R        GG   I     V +  +A
Sbjct: 277 MFTMMNAERLDVAVQGVGLAEVALQRSLAYANERKQGRAGKDGGPDFIAKHGDVRRMLLA 336

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +AL +    A+  R     +      +  A   +M P+ K +  + A      A++  G
Sbjct: 337 QMALAM-GCRAMVMRTLVDLE----LGDRPALMELMTPVAKAFATEAAMEAADHAIQVHG 391

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN---AMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           G G++ E  + +  R+     I  G+     A V   +  L+ G  L E   + +E+ +G
Sbjct: 392 GYGFLREYRVEQILRDGRITRIYEGTNGIQAATVAGRVIRLDNGRALTE-FKAEVEESMG 450


>gi|329937763|ref|ZP_08287282.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus
           M045]
 gi|329303162|gb|EGG47050.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus
           M045]
          Length = 379

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---VG 254
           G  L+E   G+D AA+T + +   +G Y ++G K W      +D + + A+       V 
Sbjct: 124 GYSLSEPGAGSDAAALTCKAEPTPEG-YRITGTKAWITHGGKADFYALFARTAPGPHGVS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL P     G+  GL +   + K+G  +  T    +    G LL    +     + + I
Sbjct: 183 CFLAP-----GAVEGLSFGLPERKMGLHAVPTAAAHWD---GALLEKDRLIGAEGQGLAI 234

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LD   + ++     LA+A     + YA  R   G  L+D   +   +AD+   + +
Sbjct: 235 AFSALDCGRLGIAACATGLAQAALDVAVDYANERTTFGRRLVDHQGLGFLLADMTAAVDS 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A     A   D   + S +A+ A+++A          A  V  +A++ +GG GY  + 
Sbjct: 295 ARATYLDAARRRDRGHAFSRQASVAKLVA-------TDAAMKVTTDAVQVLGGYGYTRDF 347

Query: 429 SIARHYRESPANSILLGS 446
            + R+ RE+    I  G+
Sbjct: 348 PVERYMREAKITQIFEGT 365


>gi|329908070|ref|ZP_08274824.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546771|gb|EGF31706.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 394

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K++ G Y L+G K W  +SP++D F++ A
Sbjct: 126 PKLATGEFIGCFGLTEPDHGSDPGSMVTRARKVAGG-YALTGSKMWISNSPIADVFVIWA 184

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  EG +  F    +LE G   GL    +  K G R++ T E+   N F        D+ 
Sbjct: 185 KDDEGAIRGF----ILEKGMA-GLSAPAIHGKFGLRASVTGEIVMDNVFCPEENAFPDVR 239

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRA 358
              GP         L++A   +S   +  AE+  H AR+    R   G  L    ++++ 
Sbjct: 240 GLKGP------FTCLNAARYGISWGALGAAESCWHIARQYVLDRKQFGKPLAANQLIQKK 293

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +I  A     RL    DE  +  E       +  + K   C  +  +   A + 
Sbjct: 294 LADMQTEITMALQGVLRLGRMKDEGTAAVE-------ITSMMKRNSCGKSLDIARVARDM 346

Query: 419 IGGSGYIEERSIARH 433
           +GG+G  +E  + RH
Sbjct: 347 LGGNGISDEYGVIRH 361


>gi|288962555|ref|YP_003452850.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288914821|dbj|BAI76306.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 40/271 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCF 256
           LTE   G+D AA+ ++  +  DG Y L+G K F+S +  SD ++++A+      G +  F
Sbjct: 124 LTEANAGSDAAALRTRAVRDGDG-YILNGAKQFISGAGSSDLYLVMARTGEDGPGGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNT----------FGFLLGDLNV 304
           LVP+        GL +   ++K+G  +  T  V LE +             GF      +
Sbjct: 183 LVPK-----DTAGLSFGSNEHKMGWNAQPTRAVILEDARVPATARLGQEGMGFKFAMAGL 237

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G +         + A  S+ G + +L +A+ Y   R   G  L     ++  IAD+A 
Sbjct: 238 DGGRI---------NIAACSIGGAQAALDKALTYMSERKAFGQTLDRFQALQFRIADMAT 288

Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++ AA     R A++ D  AK  +   A A+  A  T +        V   A++  GG G
Sbjct: 289 ELEAARTFVHRAASALDAGAKDATRLCAMAKRFATDTGF-------EVANNALQLFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454
           Y+ +  + +  R+   + IL G+   M L V
Sbjct: 342 YLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372


>gi|121611018|ref|YP_998825.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555658|gb|ABM59807.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 32/328 (9%)

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A +LY +AQ+E       +     + + +  P + +  + +  SR Y P    PM   ++
Sbjct: 66  ADQLYAVAQIEEIARAGCTGIGFGLHSEIVAPYILRYGSAEQKSR-YLP----PMASGAM 120

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254
              + ++E   G+D+  I +Q  + +DG  Y L G K F+++   +D  I++A+ +   G
Sbjct: 121 IGAIAMSEPAAGSDLQGIQTQAIQSADGSHYLLRGSKTFITNGWHADLVIVVAKTDPAAG 180

Query: 255 CFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV-STGPV 309
              +  LL E G P     +RLK K+G ++  T EL F N     G LLG   +   G +
Sbjct: 181 AKGISLLLVERGMPGFEAGRRLK-KVGLKAQDTAELFFDNVRVPAGNLLGGPALQGRGFI 239

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362
             M+ L +  L  AI +V+  + ++   + Y ++R V G     QPV      +  +A++
Sbjct: 240 CLMEQLPWERLQIAITAVAAAQAAIDSTVDYVKQRQVFG-----QPVAAFQNTRYTLAEL 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++  A     +      + K  S  A+ A       KYW   +   V+ E ++  GG 
Sbjct: 295 QTEVQVARVFVDKCCELLLQQKLDSASASMA-------KYWTTDLQCKVMDECVQLHGGY 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y ++    I  G+   M
Sbjct: 348 GYMWEYPIARAYADARVQRIYGGTNEIM 375


>gi|229490935|ref|ZP_04384770.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229322325|gb|EEN88111.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 411

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G    
Sbjct: 155 IAMTEPGTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGF 213

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG ++  T EL F++               F +L+ +L  
Sbjct: 214 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNL-- 271

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      A+++ + M   L   I Y R R   G  +      +  +A++A 
Sbjct: 272 ---PQERLSI------AVVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 322

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A   L  +     +  K   +EAA A       K+W  +    +I   ++  GG GY
Sbjct: 323 ETTAVRILVDKFIEQLNAEKLTVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 375

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++E  +A+ Y +S   +I  G+   M
Sbjct: 376 MKEYPVAKAYMDSRVQTIYGGTTEIM 401


>gi|182419350|ref|ZP_02950602.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237666601|ref|ZP_04526586.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376681|gb|EDT74253.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237657800|gb|EEP55355.1| butyryl-CoA dehydrogenase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 379

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A   +  +   D  Y L+G K F+++  +++ FI+ A  +  +G   +
Sbjct: 123 FGLTEPGAGTDAAGQQTTARLEGDH-YVLNGSKIFITNGGVAETFIVFAMTDKSMGTRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +L+NK+G R+++T EL F +       L+G      G    MK  
Sbjct: 182 SAFIVEKSFPGFSIGKLENKMGIRASSTTELIFEDCIVPKENLIGKEGKGFGIA--MKT- 238

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +A     EA+ Y + R      L     ++  IA++ + I AA 
Sbjct: 239 --LDGGRIGIAAQALGIAEGAFDEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKIEAAK 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A         S +AA A++ A         +A  V  +A++  GG GY +E  +
Sbjct: 297 HLVYKAAWKKQNGMPYSVDAARAKLFA-------ADVAMEVTTKAVQLFGGYGYTKEYPV 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 350 ERMMRDAKITEIYEGT 365


>gi|170051566|ref|XP_001861821.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167872758|gb|EDS36141.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 404

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G+K W  ++  +++ ++ A  +       +
Sbjct: 144 FALSEPGNGSDAGAASTVAALKGD-RWVLNGNKCWITNAYEAESAVVFATTDKSMKHKGI 202

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR     +  G    + ++K+G R ++T +L F +     +   N+   P    K
Sbjct: 203 SAFIVPR-----NAPGFSLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGMGFK 254

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++   + +A+A     + YA +R   G  +     ++  IAD++L + 
Sbjct: 255 IAMQTLDAGRIGIASQALGIAQASLECAVDYANKRIAFGKPISKLQSIQSKIADMSLGLE 314

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D     ++EAA A++ A  +  +C         + ++ +GG GY+ +
Sbjct: 315 SARLLTWRAAWLKDNKHPFTKEAAQAKLAASESATFCAH-------QCIQILGGMGYVSD 367

Query: 428 RSIARHYRESPANSILLGS 446
               RHYR++    I  G+
Sbjct: 368 MPAERHYRDARITEIYEGT 386


>gi|47939362|gb|AAH71366.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio]
          Length = 442

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 29/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGVKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E +     +   L D    G    R   K+G ++  T EL F +       LLG 
Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           +N      ++  P E + I      A+M ++       E+ +Y  +R   G  + D  V+
Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++  +I    A          E K  S  A+ A       KYW   +   V  + 
Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IA+ + ++    I  G+   M
Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430


>gi|27379066|ref|NP_770595.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27352216|dbj|BAC49220.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 381

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 28/272 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S       ++     G  G   +  L
Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDH-YVLNGQKQFISGAGGTDLLVAMVRTGGDGPGGISTL 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPV 309
           + DG+  G+ +   + K+G  +  T  + F N              GF +    +  G  
Sbjct: 183 VIDGNTPGVSFGANERKMGWNAQPTRAVMFENARVPVANRLSEEGVGFKIAMAGLDGG-- 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+    S+ G + +L +A +Y + R   G  L +   ++  +AD+A+++ AA
Sbjct: 241 -------RLNITACSLGGAQTALDKARNYMKERKAFGKRLDEFQALQFRLADMAIELEAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               +R A + D           A ++  + K +   +   V  +A++  GG GY+ E  
Sbjct: 294 RTFLWRAAAALDRKDPD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           I +  R+   + IL G+   M L V   L +G
Sbjct: 348 IEKIVRDLRVHQILEGTNEIMRLIVARKLIEG 379


>gi|145221687|ref|YP_001132365.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145214173|gb|ABP43577.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 464

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 143/332 (43%), Gaps = 58/332 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P     WAP+ F    D      ++  ++AI    +E  GG+D+  + +  +
Sbjct: 96  SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145

Query: 220 KIS---DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270
           +     D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL
Sbjct: 146 RAGPEPDADWIIDGHKMWIGNGGIANVHVVNAVVDQELGHKGQALFVVP----GGTP-GL 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306
              R  +K+G R++ T EL+F++       LLG                       + + 
Sbjct: 201 DMVRKLDKLGCRASHTAELKFNSVRVPADHLLGGQEKLDHKLARAREAVEGGRHSGSATL 260

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G  E  + ++    A  ++   R +L     YA RR   GG +ID   +   +AD+A  +
Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGGPIIDNQGISFPLADLATGL 316

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++R   S+  A        + R    ++K    ++A      A++ +GG GY++
Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAIQTMGGYGYVK 370

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + + YR++   +I  G+     + + N L
Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402


>gi|159901122|ref|YP_001547369.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894161|gb|ABX07241.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 379

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 20/266 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           AP+          L+E   G+D AA   + + + DG  Y ++G K W  +   +D  +++
Sbjct: 112 APLASGQKLGAFSLSEPGAGSDAAA--QKTRAVEDGDYYIITGTKNWVTNGSKADTILLM 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                  G   +   L D    G+   ++++K+G RS  + ++ +    G+ +    +  
Sbjct: 170 TMTAPEKGVKGITAFLIDTHEPGVSILKVEDKLGIRSAQSAQMSYD---GYRVHKSRMLG 226

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            P E  KI +  L+   + ++   + +A+     A+ YA+ R   G  +I+   +   +A
Sbjct: 227 QPGEGFKIAMTILNGGRIGIASQALGIAQGAYEAALDYAKVREQFGQSIINFQAVGFTLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L++  A   D+ ++    AA A++ A  T  W          +A++  G
Sbjct: 287 DMATRIKAARMLTYHAAWLKDQGENYIAAAAMAKVYASETAMWTA-------TKAVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +GY +E  + R++R++    I  G+
Sbjct: 340 SNGYSKEYPVERYFRDAKITEIYEGT 365


>gi|309812986|ref|ZP_07706714.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433058|gb|EFP56962.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 388

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 36/313 (11%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207
           G ++   + +  +VA  T  +  K W PK+ S E+              +G +G+TE   
Sbjct: 93  GFVVHAIIVTHYIVAYGTEEQKRK-WLPKLCSGEW--------------VGAVGMTEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA------QVEGRVGCFLVPR 260
           G+D+  ++++  +  D  + ++G K F+++   +D  +++A      +  G  G  L+  
Sbjct: 138 GSDLKRVSTRAVRDGDE-FVINGSKTFITNAGHADLIVLVARTCERDKAAGHKGISLI-- 194

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           +LE    +G    R+  KIG     T EL F++       LLG+       + +      
Sbjct: 195 VLETADLDGFERGRVLQKIGQHGQDTRELHFTDMRVPVANLLGEEGRGFYHLMEQLPQER 254

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A  +V    +++   + +A+ R +  G L+D    +  +A+ + D+ AA  L     
Sbjct: 255 LGLACTAVGSAELAVKLGVEHAKSRELFDGTLMDLQNTRFVLAECSTDVLAARTLLDHCI 314

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E K  S  A+ A       KYW   +   VI   ++  GG G++ E  IA+ Y  +
Sbjct: 315 MLHMEGKLDSATASRA-------KYWTTDVQCNVIDRVLQLFGGYGFMLEYPIAKMYAGA 367

Query: 438 PANSILLGSGNAM 450
               I  G+   M
Sbjct: 368 RIQKIYGGANEVM 380


>gi|302526280|ref|ZP_07278622.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435175|gb|EFL06991.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 384

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 20/281 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+         GL+E+  G+D A++  +     D  + L+G K W  ++  S+ + +LA 
Sbjct: 115 PLASGEAGFSYGLSERDAGSDTASMRCRATPSGDD-WILNGQKSWITNAGFSEYYTVLAV 173

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  GR G  +   ++E   P G  +   + K+G + + T EL F      + GD  V  
Sbjct: 174 TDPDGRRGANVTAFVVEKSDP-GFSFGAKEKKLGIKGSPTRELLFDQVR--IPGDRIVGE 230

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            P + +KI L  LD   ++++   V +A+     A+ Y + R   G  + D   ++  +A
Sbjct: 231 -PGQGLKIALKTLDHTRVTIAAQAVGIAQGALDHALAYVKERKQFGKHIADFQGIQFMLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ +  A  + +  A     AKS   +   +       K     +A +V  +A++ +G
Sbjct: 290 DMAMAVETARQMVYTAA-----AKSERGDDDLS-FFGAAAKCHASDVAMSVTTDAVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G GY  +  + R  R++    I  G+     L +   L KG
Sbjct: 344 GYGYTRDFPLERMMRDAKITQIYEGTNQIQRLVMARQLLKG 384


>gi|169796360|ref|YP_001714153.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156904|ref|YP_002318949.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483821|ref|YP_002326046.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|332851984|ref|ZP_08433851.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871715|ref|ZP_08440175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149287|emb|CAM87170.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056064|gb|ACJ40966.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988701|gb|ACJ59000.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|332729561|gb|EGJ60899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731283|gb|EGJ62580.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 383

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V     D    G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +
Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|147678769|ref|YP_001212984.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274866|dbj|BAF60615.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 381

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 20/265 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++  Q   + DG  Y ++G K F+++   +  + ++A  +   G   
Sbjct: 125 FALTEPGAGSDAGSV--QTTAVLDGNEYVINGSKCFITTGGYASIYTVIASTDTSKGVKG 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + +    G+   + +NK+G R++ TVEL F N     +   N+     E  K+ + 
Sbjct: 183 LSAFIVEAEREGIFVGKHENKMGIRASNTVELMFKNV---RVPKENLIGKEGEGFKLAMQ 239

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  ++ + M V L++A     + +   +   G +L     ++  +AD+ + +     
Sbjct: 240 TLDSGRINQAAMAVGLSQAALEAVVDFVNGQQRGGKLLAKSQYIQFKVADMCMAVETCRN 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +++    D  +  S+EAA       I K +C   A  V +EA++  G  GY+++  + 
Sbjct: 300 MVYKVCYLKDSGQHFSKEAA-------IAKAYCTDTAMWVASEAVDIFGIYGYMKDSPVE 352

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           + YR+     I  G+     + + N
Sbjct: 353 KLYRDVKVMQIYEGTNQVQRIVIAN 377


>gi|302875798|ref|YP_003844431.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307689233|ref|ZP_07631679.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302578655|gb|ADL52667.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 379

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++   ++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLDGDNYILNGSKIFITNGGYAETFIVFAMTDRSKGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + + S  G    +++ K+G R+++T EL F N       LLG +    G    MK 
Sbjct: 181 ISAFIVEKSFPGFSIGKVEEKLGIRASSTTELIFENCVVPKENLLGQVGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + ++   + +A     EA  Y + R   G  L     ++  +AD+ + I +A
Sbjct: 239 ---LDGGRIGIAAQALGIAGGAFNEAKAYMKERKQFGRSLDKFQGLQWMMADMEVAIESA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A   D+    + EAA A++ A         +A  V  +A++  GG GY  E  
Sbjct: 296 RYLVYLAAWKKDQGLPYTVEAARAKLHA-------ANVAMDVTTKAVQLFGGYGYTAEYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|259418857|ref|ZP_05742774.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp.
           TrichCH4B]
 gi|259345079|gb|EEW56933.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp.
           TrichCH4B]
          Length = 387

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRND-RYVLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +    G    +  +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       + E + Y   R   G  + +  +M+  IAD+   +  A 
Sbjct: 247 ERVVLAGIGTGIMASC-----MDEMMPYMAERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426
           A  + +A + D+     ++AA            CC  A  V      +A++  GG+GY+ 
Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370


>gi|226306262|ref|YP_002766222.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226185379|dbj|BAH33483.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G    
Sbjct: 124 IAMTEPGTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGF 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG ++  T EL F++               F +L+ +L  
Sbjct: 183 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNL-- 240

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      A+++ + M   L   I Y R R   G  +      +  +A++A 
Sbjct: 241 ---PQERLSI------AVVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A   L  +     +  K   +EAA A       K+W  +    +I   ++  GG GY
Sbjct: 292 ETTAVRILVDKFIEQLNAEKLTVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++E  +A+ Y +S   +I  G+   M
Sbjct: 345 MKEYPVAKAYMDSRVQTIYGGTTEIM 370


>gi|127512598|ref|YP_001093795.1| butyryl-CoA dehydrogenase [Shewanella loihica PV-4]
 gi|126637893|gb|ABO23536.1| Butyryl-CoA dehydrogenase [Shewanella loihica PV-4]
          Length = 385

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++    G  G   +  +
Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGSTELLVVMCRTGDAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T E+ F         LLG+     G    MK L   
Sbjct: 183 AIPADAAGISYGKAEDKMGWNAQPTREITFDKVRVPVTNLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSVGTAQAALERAQQYMNERQQFGKPIAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E  AY      + K +   +   V   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFNVCDSALQLHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|322709234|gb|EFZ00810.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 570

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 42/301 (13%)

Query: 143 MAQLEAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           M+++E G    L   S   A  +    T    + W P +F+R+ +               
Sbjct: 248 MSRVEGGVGIALAGASSIGAPPIVNCGTEEQKRKWLPGLFTRKTN-------------FS 294

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           LG+TE  GG+D+A I +  +K  DG  Y ++G  KW   +P +   +  A   GR G   
Sbjct: 295 LGITEPSGGSDVARIKTTAEKTPDGKFYIVNGVKKWITGTPWA-THMTTAVRTGRPGMKG 353

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVED 311
           V  L+      G+ +Q+++N   N   A+      V +   N    LLG+ N      E 
Sbjct: 354 VSLLVIPMDSPGIMHQKIQNSGQNAGGASFVYLENVRVPVEN----LLGEEN------EG 403

Query: 312 MKILIY---LDSAIMSVS---GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             I++     +  +++V      R  LA +  YA +R   G  LI+  V++R ++++A  
Sbjct: 404 FMIIMKNFNKERFLLTVGCNRKARSCLAMSFQYAMKRETFGKPLIENQVIRRKLSEMAHR 463

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I A  A   +LA     +    E+   A  +A + K    ++      EA +  GG+GY+
Sbjct: 464 IEAHWAWLEQLAYHIKCSDLGWEDPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYM 522

Query: 426 E 426
           +
Sbjct: 523 K 523


>gi|310824678|ref|YP_003957036.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397750|gb|ADO75209.1| Acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 600

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 51/391 (13%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI---RAARLYLMA-QLEAGHLMSPSVTSA 159
           H L+R+     +   +   S  P V  Q   +     A  YLMA  L A   +  ++ +A
Sbjct: 78  HPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYVGLTIGAA 137

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++    TP + + +  +++  E+  T             + LTE + G+ +  + ++  
Sbjct: 138 HLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLGDVKARAF 184

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS-- 266
              DG Y +SG K F+S    D       + LA++EG       +  F VP    +G   
Sbjct: 185 PAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSRRPEGDRL 244

Query: 267 -PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             N +    + +KIG R   ++ L +    +  G+L+G+ N     +  M     +   +
Sbjct: 245 VDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNEARIMVGL 304

Query: 323 MSVSGMRVSLAEAIHYARRR---HVSGGILIDQP--------------VMKRAIADIALD 365
             V+   V+  EA+ YAR R     +G     QP              + ++AI +  L 
Sbjct: 305 NGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKAIVEGGLS 364

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AAT++   LA    + ++R        ++ P+ K +  +        A++  GG GY 
Sbjct: 365 LLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQVHGGYGYS 424

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E       R+   NSI  G+     LD+L 
Sbjct: 425 SEYLPEAWLRDQKLNSIHEGTTGIQGLDLLG 455


>gi|294010131|ref|YP_003543591.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292673461|dbj|BAI94979.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 599

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 51/311 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246
           PM        + ++E + G+ +  I ++ +   DG Y L G K ++S     +S+  + L
Sbjct: 155 PMLAGRFTGTMCMSEPQAGSSLGDIRTRAELQPDGSYRLFGTKMWISGGDHELSETIVHL 214

Query: 247 AQVEGRVG----------CFLVPR-LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFS 292
             V  R G           F+VP+ ++ DG+P   N +    L +K+GNR+     L   
Sbjct: 215 --VLARTGPAEHGVRGLSLFIVPKHIVRDGNPAERNDVALVGLNHKMGNRATTNCVLSLG 272

Query: 293 N----------TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHY 338
           +            G+ +G+ N     +  M    +I++ L + ++  +G       A+ Y
Sbjct: 273 DGQFAVDGQAGAVGYRIGEENRGLSYMFHMMNEARIVVGLGAVMLGYTGY----LHAVQY 328

Query: 339 ARRR------HVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           AR R         GG    +I    +++ +      +    AL   LA   D+  +  EE
Sbjct: 329 ARDRPQGRALTQKGGDPVAIIQHADVRQMLLTQKAYVEGGLALCLYLAKLLDDQSTGDEE 388

Query: 390 AA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            A        ++ PI K W  K        A++  GG+GY  +  + + YR++  N+I  
Sbjct: 389 TARRAYLLLDLLTPIGKSWPAKWCLEANNLAIQVHGGAGYTHDFPVEQFYRDNRINAIHE 448

Query: 445 GSGNAMVLDVL 455
           G+     LD+L
Sbjct: 449 GTHGIQALDLL 459


>gi|110832882|ref|YP_691741.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110645993|emb|CAL15469.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 383

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 31/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCF 256
           LTE   G+D A +++  +K  +G Y L+G K F+S    +D  +++A+      G V CF
Sbjct: 124 LTEPNAGSDAAGLSTTAKK-DNGDYVLNGAKAFISGAGDTDVLVLMARTGGPGAGGVSCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
            VP         G+ Y R + K+G +S  T       V +      G       ++ G +
Sbjct: 183 AVP-----ADAPGVSYGRNEAKMGWKSQPTRAVILEDVRIPAECLIGEEGQGFKIAMGGL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A  S+   + +L +A  Y + R   G  + D   ++  +AD+A ++ AA
Sbjct: 238 DGGRINI----ASCSLGAAQAALHQAQQYVQERKQFGQAISDFQTVQFTLADMATELVAA 293

Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +    A   D+  S +S   A A+ MA    +  C         A++  GG GYI E 
Sbjct: 294 QQMVRLAAWKLDQNHSDKSMLCAMAKRMATDLCFNVCN-------HALQLHGGYGYITEY 346

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
            + R+ R++  + IL G+   M V+   N+L+
Sbjct: 347 PLERYLRDARVHQILEGTNEIMRVIIARNVLK 378


>gi|46128265|ref|XP_388686.1| hypothetical protein FG08510.1 [Gibberella zeae PH-1]
          Length = 426

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 30/278 (10%)

Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           N +P QK          TSV   L ++E   G+D+ ++ +  + + DG Y L+G K W  
Sbjct: 142 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRTTAKAV-DGGYVLNGSKMWIT 199

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + P +D  ++ A+ E       +   + D    G    R  +K+G R + T EL F   F
Sbjct: 200 NGPDADFIVVYAKTEPEKNSKGITAFIVDTKTEGFSCARKLDKMGMRGSNTGELMFDGVF 259

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349
                +LG +N   G V  +   + L+  ++S      M+ +L   + +  +R   G  +
Sbjct: 260 VPTENILGKVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVTLPFTHQRKQFGQPI 316

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMA 408
               +++  +AD+   + A+   ++  A + DE    R+++ A A +       +  + A
Sbjct: 317 AHNQLLQGKLADMYTKLQASRCYTYATAKAVDENGLIRTQDCAGAIL-------YAAERA 369

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + ++ +GG GY+EE   +R  R++    I  G+
Sbjct: 370 TECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 407


>gi|256371816|ref|YP_003109640.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008400|gb|ACU53967.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 381

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 144/308 (46%), Gaps = 26/308 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S+V  M TP + +  + ++      PT    ++  S+A  + ++E   G+D+AA+ ++  
Sbjct: 88  SVVTDMATPSLARYGSHELKLHYLVPT----LRGDSIA-SVAVSEPDAGSDVAALRTRAV 142

Query: 220 KISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +  D  + ++G K ++++   +D   +LA+     G   + +++      G    R  +K
Sbjct: 143 RDGDD-WVITGTKLYITNGTQADWICLLARTSDEGGYRGMSQIVVPTDAPGFRVARALDK 201

Query: 279 IGNRSNATVEL-------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +GN ++ T EL         SNT G +           ++ +++    ++  +V  M  +
Sbjct: 202 LGNHASDTAELVLEECRVPVSNTIGTIGRGFQQQMAQFQNERMI----ASYSAVGAMERA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L     YAR R V G  L+ +  ++  +A+++ ++      ++  A ++   +  +    
Sbjct: 258 LERTAAYARERMVFGEPLLAKQYVQFRLAELSAEVDLLRHYNYACAEAYMAGEDTTR--- 314

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A I K    +++ AV    ++  GG+GY+EE  ++R++R++   SI  G  + ++
Sbjct: 315 ----FATIAKLTAGRLSRAVADWCLQLHGGAGYMEETWVSRYFRDARLLSI-GGGADEVM 369

Query: 452 LDVLNLLE 459
           L +L  LE
Sbjct: 370 LQILTRLE 377


>gi|254390358|ref|ZP_05005575.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294813837|ref|ZP_06772480.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326442255|ref|ZP_08216989.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197704062|gb|EDY49874.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294326436|gb|EFG08079.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 608

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRAKAVRQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+G+
Sbjct: 224 KGLSLFLVPKYEFDVETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGE 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  KI+ +  +     +++ +      A+ YA+ R V G  L++        
Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGSDLVNFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI-----MAPI 399
                 P ++R++           AL    A+  DE   K  ++E+A   I     + PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIAVKEAADESAAELIALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + +   +A++++  GGSGY++E  + ++ R++  +++  G+
Sbjct: 401 VKGYGSERSYEQLAQSLQIFGGSGYLQEYPVEQYIRDAKIDTLYEGT 447


>gi|114563892|ref|YP_751406.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
 gi|114335185|gb|ABI72567.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
          Length = 389

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   +   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNDAQKAKYLPKLVSGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLEKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F +     + + N+  G    +K+L+  LD   +
Sbjct: 195 RGSKGFSQAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +SG  + +  A     + Y   R   G  +    +++  +AD+   + AA A  + +A 
Sbjct: 252 VLSGGPLGIMSACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAARAYVYSVAK 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R++ 
Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 365 LYEIGAGT 372


>gi|312212046|emb|CBX92130.1| similar to acyl-CoA dehydrogenase domain protein [Leptosphaeria
           maculans]
          Length = 438

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 47/315 (14%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +     +  +V +   +A   T +  ++  PKI S E             +    G+T
Sbjct: 120 AGMAGAQAIHANVYATQPLAKFGTEKQLQETIPKIISGE-------------IRTCFGVT 166

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---------V 253
           E   G D   +++Q +K+ DG Y ++G K W   + ++D  I+LA+   R         +
Sbjct: 167 EPNAGLDTLRLSTQAKKLDDGTYTVTGQKIWITCAQVADRMILLARTAAREEAETPSKAL 226

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +P    D S  GL  +R+K K+G R+    E+ F N +      L    G  E  K
Sbjct: 227 SMFCIPI---DRSAPGLDMRRIK-KMGGRAVDANEVFFDN-YKVPADCLVGKEG--EGFK 279

Query: 314 ILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362
           I+++ +++    ++G  +     +LA+A  YAR R     ++  +P+     +   +AD 
Sbjct: 280 IILHGMNAERCLLAGEALGLGYAALAKASSYARER-----VVFQRPIGMNQGVAHPLADA 334

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGG 421
            + + AA   ++  A  +D +K+       A  + A   KY   + A      A+   GG
Sbjct: 335 YMRLEAAKLATYHAARLYDASKTDDTIRQDAIGVAANSAKYLAAEAAFTACERAILAHGG 394

Query: 422 SGYIEERSIARHYRE 436
            GY +E  + R +RE
Sbjct: 395 MGYAQEYDVERWFRE 409


>gi|301061482|ref|ZP_07202246.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444400|gb|EFK08401.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 391

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 36/285 (12%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           PM     AI G  +TE   G+DI ++ S+  K  DG Y L+G K F+++     F++   
Sbjct: 120 PMVTGGEAIFGCAITEANAGSDIFSVRSKAVK-KDGGYVLNGSKMFITNGSIADFLL--- 175

Query: 249 VEGRVGCFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
               V C   P           LL D    G    +L  K+G R++ T  L FS+    L
Sbjct: 176 ----VFCITNPEAKSRYEKYSFLLLDTKTEGFEADKLNGKMGIRASDTASLSFSDV---L 228

Query: 299 LGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILID 351
           + ++N+  G        +      +  I    G+ V+   L  A+ Y + R   G  L  
Sbjct: 229 IPEVNLLGGQEGKGFRQVMECFNFNRIIAGSQGVGVAQGALDLAVKYMKEREQFGKPLTS 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +A++A  + AA AL    A   D      +  + A+++A  T       A  V
Sbjct: 289 FQGLQFKLAEMASRVEAARALVRMGAWMIDNGTLDPKIVSIAKLVAGET-------AVRV 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             EA++  GG GY++E  + R YR++    I  G+     + V N
Sbjct: 342 TDEALQLHGGYGYMDEYHVERFYRDAKIVEIYEGAKEIEKITVAN 386


>gi|253680925|ref|ZP_04861728.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253562774|gb|EES92220.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + DG  Y L+G K F++ +P++D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--GQTIAVKDGDKYILNGQKCFITNAPIADVFVIFAMTDKSKGNKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KIL 315
           +   + +    G+   ++++K+G       E+        +L D  V   P E++  K  
Sbjct: 181 ISAFIVEKEYPGISIGKVEDKMGINGAQVGEI--------ILEDCPV---PAENLLGKEG 229

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A            EA  Y + R   G  L     +   +AD+ 
Sbjct: 230 RGFGIAMKTLDGGRIGVAAQGLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMD 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I  A  L ++ A   +  K  S  AA A++        C   A  V  EA++  GG G
Sbjct: 290 VRIEQARYLLYKAAMDKNNGKPYSVSAARAKLA-------CTDAAMYVTTEAVQLFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI++  + R +R++    I  G+
Sbjct: 343 YIKDYPVERMFRDAKITQIYEGT 365


>gi|114765989|ref|ZP_01445001.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114541707|gb|EAU44746.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 380

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 14/264 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+AA+T+  ++  D  Y + G K W     ++D  ++ A+ +   G   +  
Sbjct: 123 VTEPDHGSDVAAMTTTARREGDE-YVIKGTKAWVTFGQVADVIMVFAKTDPEAGHRGISC 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-DLNVSTGPVEDMKILI 316
           +L +    G+   + +  +G    A   + F +     G L+G +       +E+     
Sbjct: 182 ILVETDRAGVSRGKSEELLGMHGLAECMVSFDDVRVPVGNLIGPEHGAFKMAMENFNFSR 241

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + S+ M++   + ++ +AI YA  R   G  + +   ++  IAD+A DI+AA  L    
Sbjct: 242 LMMSS-MALGMAQAAMEDAIAYANDRKQFGKPIFEHQAVQFMIADMAKDISAARLLIHNA 300

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  +D  +  + EAA A       K +   MA   I+ A++  GG+GY  E  + R +R+
Sbjct: 301 AKLYDAGQPIALEAAQA-------KLFTTDMAQGHISNALQIHGGNGYSREFRVERLFRD 353

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
              + I  G+     + +   ++K
Sbjct: 354 VRLSQIYEGTNQIQRMIIARQVQK 377


>gi|281203924|gb|EFA78120.1| isovaleryl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 424

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 30/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++  K S G + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 155 LAMSEPNAGSDVVSMKTRATKTSGG-WVLNGTKMWITNGPDADVLVVYAKTDINAGSKGI 213

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--- 315
              L +    G    +  +K+G R + T EL F + F   + D NV     + +K+L   
Sbjct: 214 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVLQDVGKGVKVLMSG 270

Query: 316 --------------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                         I+++S+ + +S M+  +   + Y  +R   G  + +  +M+  +AD
Sbjct: 271 LDYERLVLSAGPLGIFINSSHV-ISIMQACMDNVVPYLHQREQFGKKIGEFQLMQGKVAD 329

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + A+ +  + +A S D   +  ++ A A I+      +  + A     +A++ +GG
Sbjct: 330 MYTIMNASRSYVYSVAKSADNGYTSRKDCA-AVIL------YTAENATQCALQAIQTLGG 382

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GYI E    R  R++    I  G+
Sbjct: 383 NGYINEFPTGRLLRDAKLYEIGAGT 407


>gi|256787593|ref|ZP_05526024.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771486|ref|ZP_06530864.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289701685|gb|EFD69114.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 385

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 49/276 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + S  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F V     D    G    R  +K+G R++ T EL F         D+ V   PV
Sbjct: 184 RHGISLFAV-----DTKSQGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PV 227

Query: 310 EDM-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354
           ED+     K   YL   + S       G       A+ +A++ +V    +  +PV     
Sbjct: 228 EDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQDRTVFGKPVAHFQN 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +A    ++ AA A+  R   + D  +    EAA A++       +C ++A  VI  
Sbjct: 287 TKFELAACQAEVDAAEAVVDRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDR 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 340 CLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|293608478|ref|ZP_06690781.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829051|gb|EFF87413.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 383

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 16/242 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+    + G   + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKEGD-FYILNGTKRFITNAPHAGVFTVMARTNTDIKGAGGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L 
Sbjct: 183 AFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA  +  
Sbjct: 242 KGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVL 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +I R Y
Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|111026859|ref|YP_708837.1| isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825398|gb|ABH00679.1| possible isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 38/272 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ---VEGR-VG 254
           L +TE   G+D  ++ ++  + ++G + L+G K F+++ P++D  ++ A+   VE R + 
Sbjct: 124 LAITEPEAGSDAMSMRTKATR-TEGGWLLNGAKTFITNGPVADLALVYAKTGPVEDRELA 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F V     D +  G    R  +K+G R + T EL FS+ F   + D  V  G    +K+
Sbjct: 183 LFAV-----DTTAPGFSKGRKLDKLGWRGSPTGELAFSDCF---VPDDAVIGGIGNGIKV 234

Query: 315 L---IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L   +  +  +M   G+ ++   L EA+ YA  R   G  + D  +++  IAD+ + I  
Sbjct: 235 LRDGLASERVLMGAQGVGLAAGALREAVRYAGERRQFGRPIGDFQLIQAKIADMYVGIEL 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-----EAMECIGGSG 423
             AL  + A + D   S     A A           CK+  + +A     EA++  GG G
Sbjct: 295 GRALVSKTAAAIDAGDSGLTRLASA-----------CKLHGSEVAMNAALEAVQIFGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           Y  E  + R+ R+  A  + +G G + +  ++
Sbjct: 344 YTREFPVERYLRD--AKIMQIGGGTSEIQRII 373


>gi|331005153|ref|ZP_08328553.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
 gi|330421033|gb|EGG95299.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
          Length = 389

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMQLKAEKSGDH-YILNGNKMWITNGPDAHTYVIYAKTDTHAGSKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   N+     + +K+L+  
Sbjct: 189 TAFIVERDSVGFSRHQKLDKLGMRGSNTCELVFQDC---PVPAENILGKEGQGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG  V + +A     + Y   R   G  + +  +++  +AD+  D++A+ A 
Sbjct: 246 LDFERTVLSGGPVGIMQACLDLVVPYIHDRKQFGQSIGEFQLIQGKVADMYTDLSASRAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  +++A A I+      +  + A  +  +A++ +GG+GY+ E S  R
Sbjct: 306 LYAVAQSCDRGEATRKDSA-AVIL------YTAEKATQMALQAIQTLGGNGYVNEFSAGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|313836486|gb|EFS74200.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA2]
 gi|314928941|gb|EFS92772.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL044PA1]
 gi|314971068|gb|EFT15166.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA3]
 gi|328906611|gb|EGG26386.1| acyl-CoA dehydrogenase [Propionibacterium sp. P08]
          Length = 387

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 125 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPSDSRH 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F +T        G     L+V+ G +
Sbjct: 184 RISALMVHADDPGISYGAPEHKMGIRGSVTREVIFKDTRIPKERVIGRRGHGLSVALGTL 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 244 DNSRVSI----AAQAVGIAQGALDTATDYVQKRRQFGQPLSNFEGIQFMLADMAMRLEAA 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A +V  +A++ +GG GY +E +
Sbjct: 300 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMSVCTDAVQLLGGIGYSKESA 353

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 354 VERMFRDAKVTQIYEGT 370


>gi|293401546|ref|ZP_06645689.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305184|gb|EFE46430.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 379

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++   +D +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVKDGDDYILNGTKIFITNAGEADVYVIFAMTDKSKGTHG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           +   ++E G P G    + + K+G R +AT EL F+N   +   LLG         +  K
Sbjct: 181 ISAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNVRLSKDQLLGQEG------KGFK 233

Query: 314 ILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           I      A+M++ G R+ +A            E + Y + R   G  +      +  +AD
Sbjct: 234 I------AMMTLDGGRIGIAAQALGIAQGAIDEVVPYVKSRKQFGRPISKFQNTQFQLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA  L ++ A + +  +  +  AA A++ A        ++A  V  +A++ +GG
Sbjct: 288 MQVKTDAARLLVYQAAMAKENGQPYTYLAAEAKLFA-------AEVAMEVTTKAIQLMGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY  +  + R +R++    I  G+
Sbjct: 341 YGYTRDYPVERMFRDAKITEIYEGT 365


>gi|269925485|ref|YP_003322108.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789145|gb|ACZ41286.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 386

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 22/270 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A+I ++  +  D  Y L+G K W  ++  +  FI+ A+ + R     +
Sbjct: 127 FALTEPESGTDAASIQTRASRDGDH-YFLTGTKVWITNASHAGLFIVFARTDNRGNHKDI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
              + D    GL     ++K+G ++  + TV L+     G  +   +      +  KI +
Sbjct: 186 SAFIVDRESPGLVVDPSESKLGIKAAHSCTVHLD-----GVKVSARDRLGEEGQGFKIAM 240

Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   V + +A     I YA +R   G  + +   ++  IAD+A  + AA 
Sbjct: 241 QSLDGGRIGIAAQAVGIGQACLEMSIQYAVQRRQFGRPIAEFQAIQWKIADMATQVEAAR 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A   D+ ++ +       + A + K +  +M  +   EA++  G  GY  E  +
Sbjct: 301 LLTYRAAMLEDKGENIT-------LAASMAKLFASEMCVSAAREAIQIHGSLGYSAEYPV 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + YR+S    I  G+  A  + + + L K
Sbjct: 354 EKFYRDSKVTEIYEGTSEAQRMVIASRLLK 383


>gi|33595881|ref|NP_883524.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565960|emb|CAE36511.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 418

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
            GLTE   G+D   + ++  K  DG Y L+G+K W  +SP++D F++ A+      +G++
Sbjct: 158 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
             F    +LE G   GL    +  K+G R++ T E+   E   +   ++  ++   GP  
Sbjct: 217 RGF----ILEKGM-KGLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 269

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  +
Sbjct: 270 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 325

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        RL    DE+ +  E       +  I K   C  A  +   A + +GG+G  
Sbjct: 326 ITLGLQGCLRLGRMKDESTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 378

Query: 426 EERSIARH 433
           +E  +ARH
Sbjct: 379 DEFGVARH 386


>gi|327404531|ref|YP_004345369.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327320039|gb|AEA44531.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 380

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 31/287 (10%)

Query: 174 WAPKIFSREYDPTN-KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + F  E        P+ K        L+E   G+D  +  +    + D  Y ++G K
Sbjct: 96  WGLEKFGNEEQKVKFLTPLAKGEKIGAFCLSEPEAGSDATSQRTTAIDMGD-YYLVNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +  +I++AQ    +G   +  L+ +    G      ++K+G R + T  L F
Sbjct: 155 NWITNGSTASTYIVIAQTNAELGHRGINALIIERGMEGFIVGAKEDKLGIRGSDTHTLMF 214

Query: 292 SNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            +             FGF      +S G     +I I   +  ++  G  ++ A    Y+
Sbjct: 215 QDVKVPKANRIGEDGFGFKFAMKTLSGG-----RIGIAAQALGIAAGGFELAAA----YS 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +     +   IAD+A +I AA  L +R A   D  ++  + +A A++    
Sbjct: 266 KERKAFGKEIYKHQAIAFKIADMATEIEAARLLVYRAAADKDAGRNFDQSSAMAKL---- 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +  K+A     EA++  GG GY++E  + R  R++    I  G+
Sbjct: 322 ---YASKVAMEQTVEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGT 365


>gi|212636148|ref|YP_002312673.1| butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557632|gb|ACJ30086.1| Butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 385

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++    G  G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAVRDGDD-YLISGSKVFISGAGATEMLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                 +G+ Y + ++K+G  +  T ++ F N       LLG+     G    MK L   
Sbjct: 183 AIAADADGVSYGKAEDKMGWNAQPTRQITFDNVRVPASNLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  S+   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  L  RL
Sbjct: 241 RINIATCSIGTAQAALERATGYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F   +   E  AY      + K +   +   V   A++  GG GYI E  + RH R+
Sbjct: 300 A-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERHVRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|168702293|ref|ZP_02734570.1| acyl-CoA dehydrogenase domain protein [Gemmata obscuriglobus UQM
           2246]
          Length = 384

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 40/309 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W  +   R+Y P       K    +  GLTE   G++   +TS  +K  D  Y L+G 
Sbjct: 94  QTWGSEALKRKYLPA----AAKGEKILAFGLTEPDAGSNPREMTSTYEKRGDH-YVLNGV 148

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K+ +S+  ++ A +  A   G+VG   +   + D +  G   +         +NA + + 
Sbjct: 149 KYLISNGGIAHAVVAFAYPAGQVGTGRISAFVVDTAAKGFEAESFA------ANAKMGMP 202

Query: 291 FSNTFGFLLGDLNVSTGPVEDMK---------ILIYLDSAIMSVSG-----MRVSLAEAI 336
            SNT  F + D+ V   P E++           +  L S  +SV+      +   LAEAI
Sbjct: 203 TSNTAMFEMHDVAV---PAENLVGEEGDGFRVAMGTLVSGRLSVAAGCLGVIEDCLAEAI 259

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EE 389
            YA+ R   G  +    +++  IA I +D  A+ AL  R A    EAK RS       E 
Sbjct: 260 WYAKERKQHGKEIARHQLVQDHIAHIEMDRVASDALLIRAA----EAKDRSAASPGDKEL 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A +A ++A   K +    A      A++  GG G+       RH  +     I  G+   
Sbjct: 316 ARHADLLAAQAKLFATNAAWDAADRAVQVFGGRGWSTLYRPGRHLTDVRVCRIYEGTDEI 375

Query: 450 MVLDVLNLL 458
           + L +   L
Sbjct: 376 LKLKIAAAL 384


>gi|126665775|ref|ZP_01736756.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126629709|gb|EBA00326.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 27/242 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D + + ++ +K+ DG Y +SG K W  +SP++D F++ A+++G+V  F++
Sbjct: 134 FGLTEPNHGSDPSGMETRAKKV-DGGYLVSGSKTWITNSPIADVFVIWAKLDGKVTGFVL 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R        GL   +++ K   R++ T  +   + F      L+V    GP        
Sbjct: 193 ER-----GAKGLDTPKIEGKFSLRASETGSIFMDDVFCPDENKLDVDGLKGPFS------ 241

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE     A +Y   R   G  L    ++++ + D+  DIA    
Sbjct: 242 CLNKARYGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTDIALGLQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + +L    D  ++  +  +       + K   C  +  +   A +  GG+G  +E  + 
Sbjct: 302 GALQLGRLMDAGEASPDAIS-------LMKRNNCGKSLDIARVARDMHGGNGISDEYHVI 354

Query: 432 RH 433
           RH
Sbjct: 355 RH 356


>gi|229584383|ref|YP_002842884.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019432|gb|ACP54839.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 391

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 15/275 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K      + +TE  GG+ I  I ++ +K  D  Y +SG K F+++ P++D F++ A 
Sbjct: 126 PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGDQ-YIISGKKVFITNAPIADIFLVFAN 184

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
               +  F++P  +E     GL   +   K+G R     E+   N    +   LG+    
Sbjct: 185 TSNGITAFIIPSNVE-----GLKIDKPIRKLGLRGAVFSEVSLDNVVVPIENRLGEEGEG 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 + I   + +A +++      L +   YA  R +    LID  ++K  IA+    
Sbjct: 240 INIARHIFIGGRIIAAAIALGIGDAVLDQVYQYAISRELGNHKLIDFQILKEKIANSETI 299

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A    ++ +A   D+   +         +A I+K +  +    +  EA+   GG GY 
Sbjct: 300 LQAGKIYTYYVAYLMDKMLRQELNE-----LASISKLFTTEGVLNISNEAISIFGGYGYT 354

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +I  ++R+    +I  G+ +   L + + L+K
Sbjct: 355 DDLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389


>gi|86360109|ref|YP_471998.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284211|gb|ABC93271.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 381

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 124 LAMSEVGSGSDVVSMRLRAEKRGD-RYILNGAKFWITNAPHADVLVVYAKSDPAAGPKGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +K+G R + T EL F +       L+G         E +KIL
Sbjct: 183 SAFIIEKALPGFSVSKKLSKLGMRGSDTAELVFQDCEVPAEALMGREG------EGVKIL 236

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G     M+  L   + Y R R   G  + D  +M+  IAD+ + + +A
Sbjct: 237 MSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++   +AA A + A        + A  V  EA++ +GG+GY +E  
Sbjct: 297 RAYVYSVARACDAGRTTRTDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEWP 349

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 350 VERFLRDAKLYDIGAGT 366


>gi|77463064|ref|YP_352568.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77387482|gb|ABA78667.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 385

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 132/298 (44%), Gaps = 39/298 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P     + PK+ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  +G Y L+G K W  + P +D  ++ A+ +   G   +   L + S  G       +
Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
           K+G R + T EL F N    F  +LG         + +++L+  LD   + +SG     M
Sbjct: 206 KVGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D  +    
Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +AA   +       +  + A     +A++ +GG+G++ +  ++R +R++    I  G+
Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRDAKLMEIGAGT 370


>gi|312066465|ref|XP_003136283.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa]
 gi|307768547|gb|EFO27781.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa]
          Length = 618

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 31/270 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVG--- 254
           LTE   G+D  ++ +  +K SDG  Y L+G K W  +   +D F + A  QV+G+ G   
Sbjct: 197 LTESGTGSDANSVQTHAEKSSDGRCYVLNGGKLWISNGSFADVFTVFARTQVKGKDGTPK 256

Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
                F+V R     S  G+     + K+G + + TVE+ F NT      LLG      G
Sbjct: 257 SKISAFIVER-----SHGGVTTSVPEKKMGIKGSKTVEVHFDNTKVPVDNLLG--AEGEG 309

Query: 308 PVEDMKILIYLDSAIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL      I +V    M+  + + I +   R   G  L +   ++  + D+ L 
Sbjct: 310 FKLAMNILNNGRFGIPAVCTGSMKFCIQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLR 369

Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A  +L + L+ + D      E EAA  +IMA    +  C         A++  GG GY
Sbjct: 370 HYATESLLYMLSGAMDRGIVDYELEAAVGKIMASENAWIVCD-------RAIQLHGGMGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++E  + R  R+     I  G+ + + L V
Sbjct: 423 MKECGLERVMRDLRIFRIFEGANDVLRLFV 452


>gi|149926061|ref|ZP_01914324.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149825349|gb|EDM84560.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 376

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 17/246 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI--YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           L +TE  GG+D+A + ++      DG+  Y ++G K F++S +   ++ +A   G  G  
Sbjct: 115 LAITEPSGGSDVANLKTKADLFQKDGVPHYRINGEKVFITSGVRADWLTVAVRTGEPGAR 174

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  L+  G+  GL    LK K G   + T  + F N      +L+G        + +  
Sbjct: 175 GISVLMVPGNAKGLTRSPLK-KTGWWMSDTASIYFDNVEVPASYLVGKEGKGFRIIMENF 233

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A   V   RV L EA+ +A+ R   G  LI+  V+   +ADI + I A  A  
Sbjct: 234 NTERLMLAGACVGFSRVCLNEALDWAQNRQTFGKRLIEHQVIAHKLADIRMKIRATEAW- 292

Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                 FDE  +R ++      ++A I   K    +       EA++ +GG G++   S 
Sbjct: 293 ------FDETIARIDQGDINEELVADICLLKNQSTQTLQHCANEAVQILGGMGFMRGSST 346

Query: 431 ARHYRE 436
            R YRE
Sbjct: 347 ERIYRE 352


>gi|298206608|ref|YP_003714787.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83849238|gb|EAP87106.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 386

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE   G+D+AA+ +   K  D  Y ++G K F+++ + SD  ++ A+    +G   +
Sbjct: 122 LCVTEPFCGSDVAAMRTTAVKKGDK-YIINGSKTFITNGVYSDYLVVAAKTAPELGNKGM 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + D    G+   +L NK+G R++ T E+ F N       ++       E+ K   Y+
Sbjct: 181 SMFVIDRDTKGVSATKL-NKLGWRASDTGEIAFDNV------EIPAENLMGEEGKGFPYI 233

Query: 319 ------DSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                 +  IM ++       +L  A+ Y + R   G  +     ++  IA    ++  A
Sbjct: 234 MQHFASERLIMGINAHARAEFALEYAMDYMKEREAFGRSIDKFQALRHIIAQRVSEVEMA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              ++ ++    E +   +EA+ +++++        K+A   I + ++ +GG GYIEE  
Sbjct: 294 KTFNYTVSKRLSENEYVVKEASMSKLLS-------TKIADETIYDCLQMLGGYGYIEEYP 346

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           +AR  R+S    I  G G + +L
Sbjct: 347 MARLLRDSRLGPI--GGGTSQIL 367


>gi|115523097|ref|YP_780008.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115517044|gb|ABJ05028.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 593

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 170/403 (42%), Gaps = 63/403 (15%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P W    +R I  G +      +F       A       ++  A +  G  + P 
Sbjct: 70  KVLTAPGWPDAYQRWIAAGWNAVSGAEAFGGQGLPMAINAACTEIWAAANVAFG--LCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T +++ AL    +  + K +  K+ S E+  T    MQ         LTE + G+D+ A
Sbjct: 128 LTLSAIEALDAHGSEELKKIYLEKLISGEWPGT----MQ---------LTEPQAGSDVGA 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLL 262
           + ++ ++  DG Y + G K F++     M+D  +  +LA++         +  FL+P+ L
Sbjct: 175 LRARAERADDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK- 313
            +     G+ N +    +++K+G  +  T  +   +     G+L+G+ N        M+ 
Sbjct: 235 VNADGSLGARNDIFPSGIEHKLGMHAAPTCTMTMGDNAGAIGYLIGEEN------RGMQC 288

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMKRAI 359
           +   ++ A +SV    V +AE     A+ +A+ R     I         +I  P +KR +
Sbjct: 289 MFTMMNQARLSVGLEGVGIAERAYQQALAFAQERKQGRAIGEKPAKSDPIIVHPDVKRML 348

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIA 413
             +    AAA  + +  A + D +   S+       A  A ++ PI K +   +   V  
Sbjct: 349 LQMRSMTAAARTICYATAVALDISLRASDPAVKAAAATRAALLTPIAKAFATDIGNEVAY 408

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++  GG G+IEE   A+H R++    I  G+     +D++ 
Sbjct: 409 LGVQIHGGMGFIEETGAAQHLRDARITPIYEGTNGIQAIDLVT 451


>gi|156552988|ref|XP_001604014.1| PREDICTED: similar to GA17761-PA [Nasonia vitripennis]
          Length = 475

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 20/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  E   G   + 
Sbjct: 218 LTEPGAGSDAFSLKTVAKK--DGSDYVINGSKCWISNSDIAGVFLVFANAEPSKGYRGIT 275

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318
               +    G+   + ++K+G R++ T  + F N     + + N+        K    +L
Sbjct: 276 TFFVERDTPGVTVAKPEDKLGIRASGTCMIHFENV---RVPETNICGQFGHGYKYAAGFL 332

Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   + +    + +A+      I Y   R   G  + +   ++  IA I +++ AA  L 
Sbjct: 333 NEGRIGIGAQMIGIAQGSLDATIPYTLERKQFGKSIYEFQSLQHQIAQIVVEVEAARLLV 392

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D  K   +EAA A       KY+  ++A  V ++ ++ +GG G+  +    + 
Sbjct: 393 YNAARLVDAKKDVMKEAAMA-------KYYASEIAQRVTSKCVDFMGGVGFTTDYPQEKF 445

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           YR++   +I  G+ N  +  +   ++K
Sbjct: 446 YRDAKIGTIYEGTSNMQLSTIAKAIKK 472


>gi|156740601|ref|YP_001430730.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231929|gb|ABU56712.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 379

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +  +     L+E   G+D AA  +   +  D  Y ++G K W  +   +D  I++A 
Sbjct: 113 PLAEGRMLGAFSLSEPGAGSDAAAQKTTAARDGD-YYVINGIKNWVTNGDYADTIILMAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   L D    G    ++++K+G RS  + ++ + N   + L         
Sbjct: 172 TDPGKGHRGITAFLVDPREPGCSIVKVEHKLGIRSAHSCQMAYDN---YRLPAWRRLGEE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  L++  + ++   V +A+     A+ YA+ R   G  +I+   +   +AD+
Sbjct: 229 GQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I AA  L++  A   D+       A+ A++ A  T  W          +A++  G +
Sbjct: 289 ATRIKAARLLTYEAAWRKDQHLDFVSAASMAKLYASETAMWTA-------TKAVQVFGSN 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY +E  + R++R++    I  G+
Sbjct: 342 GYSKEYPVERYFRDAKITEIYEGT 365


>gi|187919735|ref|YP_001888766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718173|gb|ACD19396.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 601

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 40/319 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252
           + LTE + G+ ++ + +     +DG Y + G+K F+S     +S+  +  +LA++ G   
Sbjct: 163 MALTEPQAGSSLSDLVTSATPNADGTYSIRGNKIFISGGDHELSENIVHLVLARIPGGPP 222

Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F VP+    EDGS    N +    L +K+G R   +  L F       G L+G
Sbjct: 223 GVKGISLFTVPKFHVNEDGSLGARNDVALAGLIHKMGWRGTTSTMLSFGEHGECIGELVG 282

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349
           +    L      + + +I + L + ++   G   SL  A    + R             L
Sbjct: 283 EPHHGLAYMFHMMNEARIGVGLGAVMLGYRGYLASLDYARERPQGRRPDNKNPLDPQLPL 342

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403
           I+   ++R +      +  A AL    A   DE  +      R+E      ++ P+ K W
Sbjct: 343 IEHADVRRMLLAQKAYVEGAYALCLYAARLVDEQNTGESETVRAEAGLLLDLLTPVVKSW 402

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
             +      + A++  GG GY  E  + + YR++  N I  G+     +D+L     +++
Sbjct: 403 PSQWCLEANSLAIQIHGGYGYTREYPVEQFYRDNRLNMIHEGTHGIQAIDLLGRKVTMKQ 462

Query: 461 GTNLFEQLFSTLEQDLGSS 479
           G  L +QL   ++Q +G++
Sbjct: 463 GAAL-KQLAREIQQTIGTA 480


>gi|34497539|ref|NP_901754.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103394|gb|AAQ59756.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
          Length = 386

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 45/308 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+A   + ++ + W PK+ + E             V     LTE   G+D A++ ++ +K
Sbjct: 96  MIASFGSKQLAEQWVPKMVTGE-------------VLGSYCLTEPGAGSDAASLKTRAEK 142

Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRL 275
             + +Y L+G K F+S   S    +++A+  G     +  F+VP         G+ Y + 
Sbjct: 143 KGE-VYVLNGGKMFISGAGSTQVLVVMARTGGPGPKGISAFVVP-----ADAPGVSYGKK 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVS 331
           + K+G  S  T  + F N       ++ V+    E+ +   +    LD   ++++   V 
Sbjct: 197 EKKMGWNSQPTRAITFDNV------EIPVANRLGEEGQGFAFAMKGLDGGRINIATCAVG 250

Query: 332 LAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            A+A   A +R+V      G  L +   ++  +AD+  ++ AA  +    A   D A   
Sbjct: 251 TAQAALNAAQRYVQERQQFGHPLAELQTVQFRLADMLTELVAARQMVRLAAWKLDNA--- 307

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +A A     + K     ++  +   A++  GG GY+++  + RH R+   + IL G+
Sbjct: 308 ---SADATAYCAMAKRLATDLSFNIANNALQLFGGYGYLQDFPLERHVRDLRVHQILEGT 364

Query: 447 GNAMVLDV 454
              M + V
Sbjct: 365 NEVMRMIV 372


>gi|120556229|ref|YP_960580.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326078|gb|ABM20393.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 393

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++ +K+  G Y L+G K W  +
Sbjct: 115 FGNEETRQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVEGG-YRLTGSKMWITN 173

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  +G +  F++ +  E     GL    +  K+G R++ T E+     F
Sbjct: 174 SPIADVFVVWAKDDDGAIRGFVLEKGWE-----GLSAPAIHGKVGLRASITGEIVMDGVF 228

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   +S   +  AE     A  Y   R   G 
Sbjct: 229 VPEENAFPNVRGLKGP------FTCLNSARYGISWGALGAAEDCWHTARQYVLDRQQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I+ A     RL    DE  +  E       +  I K   C  
Sbjct: 283 PLAANQLIQKKLADMQTEISLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  V   A + +GG+G  +E  +ARH
Sbjct: 336 ALDVARLARDMLGGNGISDEFGVARH 361


>gi|307103035|gb|EFN51300.1| hypothetical protein CHLNCDRAFT_56404 [Chlorella variabilis]
          Length = 429

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 22/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D +A+    ++  + G Y L+G K F+S   +SD ++++A+  G  G   + 
Sbjct: 169 LTEPSAGSDASALKMTARREGASGDYILNGAKAFISGGGVSDVYLVMART-GEPGPKGIS 227

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312
             L +    GL + + ++K+G  +  T  + F        N  G       ++   ++  
Sbjct: 228 AFLVEKGTKGLSFGKPESKLGWNAQPTTAVMFDDVRVPSKNRVGQEGEGFKLAMKALDGG 287

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I       S+ G +  L  A  Y + R   GG +      +  +AD+A  I A+  +
Sbjct: 288 RINI----GACSIGGAQFCLDTAREYTQARQAFGGPISQFQATQFRVADMATSIQASRLM 343

Query: 373 SFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
               A + D  + + + E A A+  A    Y        V  +A++ +GG GY++E  I 
Sbjct: 344 VRHAAAALDAHSPTATMECAMAKRFATDACY-------RVTDDALQLLGGYGYLKEYPIE 396

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R+ R+   + IL G+   M + +   L+K
Sbjct: 397 RYMRDLRVHCILEGTNEVMRIIINRELDK 425


>gi|257094593|ref|YP_003168234.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047117|gb|ACV36305.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 389

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++    +DG Y LSG K W  +SP++D F++ A+ + GR+  F 
Sbjct: 134 FGLTEPNHGSDPGSMLARAHP-ADGGYRLSGTKTWISNSPIADLFVVWAKNDAGRIRGF- 191

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G P GL    +  K+G R++ T E+   + F     +L  ++G          
Sbjct: 192 ---LLEKGMP-GLSTPIIHGKMGLRASITGEIVMDDVFVPADNELPGASGLKGPFAC--- 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+A   ++   +  AE      RR+V      G  L    ++++ +AD+  +I      
Sbjct: 245 LDAARYGIAWGALGAAEDCWLRARRYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQG 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL    DE K+  E       +  + K   C  A  +   A +  GG+G  +E  + R
Sbjct: 305 CLRLGRLKDEGKAAPE-------ITSLMKRNSCGKALEIARLARDMHGGNGIADEYGVIR 357

Query: 433 H 433
           H
Sbjct: 358 H 358


>gi|150016905|ref|YP_001309159.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149903370|gb|ABR34203.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254
            GLTE   GTD A    Q   + +G  Y L+G K F+++  +++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V +L       G    +L+NK+G R+++T EL   N    ++   N+ +   +  
Sbjct: 181 ISAFIVEKLFP-----GFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGF 232

Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I +  LD   + ++   + +A     EA++Y + R   G  L     ++  IA++ + I
Sbjct: 233 GIAMKTLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A      +  S +AA A++ A         +A  V  +A++  GG GY +
Sbjct: 293 QAAKYLVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYPVERMMRDAKICEIYEGT 365


>gi|325122359|gb|ADY81882.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 607

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 69/365 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283

Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYAR------ 340
            +   G L+G+       +  M    +I + L +A +  +G       A+ YA+      
Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTRLQGR 339

Query: 341 ----RRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSEE 389
               R   S  I LI    ++R +      ++ A AL    A      +S ++A+ R++ 
Sbjct: 340 SRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQA 399

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+   
Sbjct: 400 HQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGI 459

Query: 450 MVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
             LD+L     L +G +   L  ++ +T+EQ            L+D      +   L R 
Sbjct: 460 QALDLLGRKTRLNQGLSMKLLHAKIMNTIEQ------ANAEPSLKDHADQLDQKWQLIRN 513

Query: 504 LTEKI 508
           +TEK+
Sbjct: 514 VTEKL 518


>gi|126665121|ref|ZP_01736104.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17]
 gi|126630491|gb|EBA01106.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17]
          Length = 591

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 44/309 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE + GTD+  I ++    +DG Y + G K +++    D       ++LA++ G     
Sbjct: 165 LTEPQCGTDLGLIRTRATPNADGSYAIEGTKIWITGGEHDLTDNIVHLVLAKLPGAPDTT 224

Query: 253 --VGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +  F+VP++L E G  N      L++K+G + +AT  + F    G+L+G+      P 
Sbjct: 225 KGISLFVVPKVLPESGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGE------PN 278

Query: 310 EDMKILIYLDSAIMSVSGMR------VSLAEAIHYARR----RHVSG--------GILID 351
           + M+ +  + +    + GM+      ++  E++ +AR     R +SG          +I 
Sbjct: 279 DGMRAMFTMMNEARLMVGMQGLGLAEMAYQESLGFARERLQGRSMSGVKNPDGPADPIIV 338

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCC 405
            P ++R +    +      A++    +  D + +  +EA         +++ P+ K +  
Sbjct: 339 HPDVRRMLMRQKVLNEGMRAMALFAGHQLDLSVAHPDEAVRESADDLVQLLTPVVKAFLT 398

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
                     ++ +GGSG+  +  + +  R+     I  G+     LD++   L  KG  
Sbjct: 399 DEGSNNTNIGLQVLGGSGFTTDWPLEQLVRDGRIARIYEGTNGIQALDLVGRKLSLKGGR 458

Query: 464 LFEQLFSTL 472
           L   LF  L
Sbjct: 459 LVRTLFGVL 467


>gi|309360182|emb|CAP31581.2| hypothetical protein CBG_12633 [Caenorhabditis briggsae AF16]
          Length = 418

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 33/278 (11%)

Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           S AIG   L+E   G+D  A+ +  +K  D  + +SG K W  ++  +  F++ A  +  
Sbjct: 154 SEAIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANADPS 212

Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            G     CFLV R  E     G+   + ++K+G R          +    L+  + +S  
Sbjct: 213 KGYKGITCFLVDRNQE-----GVSVGKKEDKLGIRL-------LRHALSTLITYVCISRP 260

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             E  K  I  L++  + +    + LA+      I Y ++R   G  LID   M+  I  
Sbjct: 261 FSERYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQ 320

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + ++I AA  L +  A   +       EAA A++ A        ++A    ++ +E +GG
Sbjct: 321 VRMEIEAARLLVYNAARMKENGLPFVREAAMAKLFA-------SQVATTATSKCVEWLGG 373

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            G+ +E  + + YR+S   +I  G+ N  +  +  L++
Sbjct: 374 VGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 411


>gi|254517613|ref|ZP_05129669.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226911362|gb|EEH96563.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 379

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 33/270 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++  ++D FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTVAVLDGDNYILNGSKIFITNGGVADTFIIFAMTDRSKGTRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G    + + K+G R+++T EL  SN       L+G      G    MK 
Sbjct: 181 ISAFIVEKEFEGFSIGKKEEKLGIRASSTTELVMSNCIVPKENLIGQEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + ++   + +AE     A+ Y + R   G  L     ++  IA++   I AA
Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVAYMKERKQFGKPLAAFQGLQWMIAEMDTKIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A   D     S +AA A++       +  ++A  V  +A++  GG GY +E  
Sbjct: 296 RHLVYKAAWLKDNKLPYSVDAARAKL-------YAAEVAMDVTTKAVQIFGGYGYTKEYP 348

Query: 430 IARHYRESPANSILLG---------SGNAM 450
           + R  R++    I  G         SGNA+
Sbjct: 349 VERMMRDAKITEIYEGTSEVQKMVISGNAL 378


>gi|196014205|ref|XP_002116962.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens]
 gi|190580453|gb|EDV20536.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens]
          Length = 609

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 32/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR------- 252
           LTE   G+D A++ ++     DG  Y L+G+K W  +   +D   + A+V  R       
Sbjct: 184 LTEPMAGSDAASLRTKAVLDDDGKHYILNGNKIWITNGGFADIMTVFARVVRRKEDSDET 243

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
              +  F+V R        G+     + K+G +S+ T  + F N       ++G   V  
Sbjct: 244 TEGITAFIVERDFP-----GVTSGPAEKKMGLKSSNTASIYFDNVKVPVENMIG--KVGE 296

Query: 307 GPVEDMKILIYLDSAIMSVSG--MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M IL      +++VS   +R+ +++   +A  R      LI+  V++  +A +A+
Sbjct: 297 GFKVAMNILNNGRFGLIAVSSGLIRMLVSKTSEHANNRIQFNQKLIEFQVVQEKLAKMAM 356

Query: 365 DIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              A  ++++ L N+ D   +  + EA+ ++I A    + CC        E ++ +GG+G
Sbjct: 357 AHYAVESIAYILCNNMDRGITNFQLEASMSKIFATEAAWHCCD-------ECIQVLGGNG 409

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ +  I RH R+     I  G+ + +
Sbjct: 410 YMRDNEIERHLRDIRVYRIFEGANDTL 436


>gi|260203941|ref|ZP_05771432.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
 gi|289573370|ref|ZP_06453597.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
 gi|289537801|gb|EFD42379.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
          Length = 390

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++ +               V     LTE   G+D  A++++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139

Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +   G    Y L G K F+S +  SD ++++A+   EG  G  +   ++E G+P GL +
Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFIVEKGTP-GLSF 196

Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315
              + K+G  +  T ++                      FG  +  LN            
Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPSEAMLGGADGEGAGFGIAMSGLNGGR--------- 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +R
Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  R
Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 360 DLRVHRILEGTNEIMRL 376


>gi|227536690|ref|ZP_03966739.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243491|gb|EEI93506.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 383

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 133/290 (45%), Gaps = 19/290 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F+ E       P   T+  IG  GLTE   G+D   +T+  ++  D  + L+G K F++ 
Sbjct: 101 FANEEQKKKYLPKLATAEWIGAWGLTETGSGSDAGGLTTVAERDGD-YFILNGSKNFITH 159

Query: 238 PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            +S    ++    G+ G    +   ++E G+P G    + +NK+G R++ T  L F N  
Sbjct: 160 AISSEVAVVITRTGQKGDKKGMTAFIIEKGTP-GFSAGKKENKLGMRASETACLFFDNC- 217

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             +  D  V       ++ L  LD   +S++ + + +A      A+ YA  R      + 
Sbjct: 218 -RVHKDQIVGEEGQGFVQALKLLDGGRISIAALSLGIARGAYECALKYANEREQFNQKIF 276

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   +   +A++A  + AA  L+ R A    E+ ++S +      ++ + K +  + A  
Sbjct: 277 DFQAVGFKLAEMATQVEAAELLT-RQAAFLKESGTKSSK------ISAMAKLYASEAAVE 329

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  E+++  GG G+ ++    +++R++   +I  G+ +   + +   ++K
Sbjct: 330 VSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTSSIQKMVIAREIQK 379


>gi|300870342|ref|YP_003785213.1| short-chain specific acyl-CoA dehydrogenase [Brachyspira pilosicoli
           95/1000]
 gi|300688041|gb|ADK30712.1| acyl-CoA dehydrogenase, short-chain specific [Brachyspira
           pilosicoli 95/1000]
          Length = 641

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 19/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ K       GLTE   G+D A  T     ++   Y L+G K F++ +P +D +++ A 
Sbjct: 114 PLAKGEKIGAFGLTEPEAGSD-AGGTETTAVLNGDHYILNGEKIFITNAPKADTYVVFAV 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G  +    NK+G RS++T +L FS+     +   N+    
Sbjct: 173 TTPGIGTKGISAFIVEKGWEGFEFGEHYNKLGIRSSSTAQLLFSDV---KVPKENLLGKE 229

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q  +   ++D+
Sbjct: 230 GQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAALEYAKDRIQFGRPIAQQQAIAFKLSDM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L +  A   ++ +    EAA A       K +   +   V+ +A++  GG+
Sbjct: 290 ATKLRAARLLVYSAAYLKEKHEPYGMEAAMA-------KQYASDIGLEVVNDALQIHGGN 342

Query: 423 GYIE-ERSIARHYRESPANSILLGS 446
           GYI+    + R YR++   +I  G+
Sbjct: 343 GYIKGAYMVERAYRDAKICTIYEGT 367


>gi|254475092|ref|ZP_05088478.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214029335|gb|EEB70170.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 386

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 32/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-FRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +    G    +  +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEMKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENILGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       + E + Y + R   G  + +  +M+  IAD+   +  A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYMKERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426
           A  + +A + D+     ++AA            CC  A  V      +A++  GG+GY+ 
Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLN 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  + R +R+  A  + +G+G + +  +L
Sbjct: 351 DNPVGRIFRD--AKLMEIGAGTSEIRRML 377


>gi|15607892|ref|NP_215266.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium tuberculosis H37Rv]
 gi|15840166|ref|NP_335203.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148660528|ref|YP_001282051.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra]
 gi|148821957|ref|YP_001286711.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11]
 gi|167968853|ref|ZP_02551130.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis H37Ra]
 gi|215410317|ref|ZP_03419125.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 94_M4241A]
 gi|215426005|ref|ZP_03423924.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|215429601|ref|ZP_03427520.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|215444884|ref|ZP_03431636.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|219556612|ref|ZP_03535688.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|253797697|ref|YP_003030698.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435]
 gi|254231066|ref|ZP_04924393.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C]
 gi|254363693|ref|ZP_04979739.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549718|ref|ZP_05140165.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185644|ref|ZP_05763118.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|260199766|ref|ZP_05767257.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289442154|ref|ZP_06431898.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289446316|ref|ZP_06436060.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|289553009|ref|ZP_06442219.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605]
 gi|289568703|ref|ZP_06448930.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|289749261|ref|ZP_06508639.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|289752800|ref|ZP_06512178.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|289756839|ref|ZP_06516217.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|294993210|ref|ZP_06798901.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 210]
 gi|297633260|ref|ZP_06951040.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207]
 gi|297730243|ref|ZP_06959361.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN R506]
 gi|298524241|ref|ZP_07011650.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774869|ref|ZP_07413206.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001]
 gi|306781400|ref|ZP_07419737.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002]
 gi|306783411|ref|ZP_07421733.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003]
 gi|306787782|ref|ZP_07426104.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004]
 gi|306792155|ref|ZP_07430457.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005]
 gi|306796516|ref|ZP_07434818.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006]
 gi|306802376|ref|ZP_07439044.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008]
 gi|306806584|ref|ZP_07443252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007]
 gi|306966780|ref|ZP_07479441.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009]
 gi|306970974|ref|ZP_07483635.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010]
 gi|307078705|ref|ZP_07487875.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011]
 gi|307083265|ref|ZP_07492378.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012]
 gi|313657568|ref|ZP_07814448.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN V2475]
 gi|2911026|emb|CAA17519.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE9 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880319|gb|AAK45017.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|124600125|gb|EAY59135.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C]
 gi|134149207|gb|EBA41252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504680|gb|ABQ72489.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra]
 gi|148720484|gb|ABR05109.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11]
 gi|253319200|gb|ACT23803.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435]
 gi|289415073|gb|EFD12313.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289419274|gb|EFD16475.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|289437641|gb|EFD20134.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605]
 gi|289542457|gb|EFD46105.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|289689848|gb|EFD57277.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|289693387|gb|EFD60816.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|289712403|gb|EFD76415.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|298494035|gb|EFI29329.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308216535|gb|EFO75934.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001]
 gi|308325849|gb|EFP14700.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002]
 gi|308331745|gb|EFP20596.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003]
 gi|308335533|gb|EFP24384.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004]
 gi|308339301|gb|EFP28152.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005]
 gi|308343014|gb|EFP31865.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006]
 gi|308346899|gb|EFP35750.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007]
 gi|308350839|gb|EFP39690.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008]
 gi|308355477|gb|EFP44328.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009]
 gi|308359430|gb|EFP48281.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010]
 gi|308363337|gb|EFP52188.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011]
 gi|308367032|gb|EFP55883.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012]
 gi|323720782|gb|EGB29852.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CDC1551A]
 gi|326905027|gb|EGE51960.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis W-148]
 gi|328457476|gb|AEB02899.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207]
          Length = 390

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++ +               V     LTE   G+D  A++++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139

Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +   G    Y L G K F+S +  SD ++++A+   EG  G  +   ++E G+P GL +
Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFIVEKGTP-GLSF 196

Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315
              + K+G  +  T ++                      FG  +  LN            
Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR--------- 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +R
Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  R
Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 360 DLRVHRILEGTNEIMRL 376


>gi|293603106|ref|ZP_06685540.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818500|gb|EFF77547.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 382

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255
           LTE   G+D  A+    ++  D  Y L+G K +++ +P++  F ++A+   E R   + C
Sbjct: 124 LTEPDAGSDAMALRLSAERDGDS-YVLNGTKRYITNAPIAGLFSVMARTAPERRANSISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV    E G+P GL   +   K+G     T ++ F N       LLG      G    M
Sbjct: 183 FLV----EAGTP-GLIIGKPDKKMGQAGALTSDVVFDNCRVPASALLGG-EEGNGFRTSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + +S + V +AE     A+ YA  R   G  + +  +++  IAD   ++ 
Sbjct: 237 RVL---DKGRLHISALCVGIAERLLSDAVKYALERKQFGQPIAEFQLIQAMIADSQAELY 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    A   D  ++ + +AA         K +  +M   V   A++  GG+GY+ E
Sbjct: 294 AARCMVLDAARMRDRGENTTMQAA-------CCKLYSTEMVGRVADRAVQIHGGAGYMSE 346

Query: 428 RSIARHYRE 436
            ++ R YR+
Sbjct: 347 YAVERFYRD 355


>gi|194016433|ref|ZP_03055047.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194011906|gb|EDW21474.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 380

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   + +   K +   Y L+G K F+++  ++D +I+ A  +          
Sbjct: 125 LTESGSGSDAGGMKTTAVK-AGSEYVLNGAKIFITNGGIADYYIVFAVTDQEATSRNTTA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + +    G    + ++K+G RS+ T E+ F +     + + N      E  KI ++ LD
Sbjct: 184 FIVEKETPGFSVGKKESKLGIRSSPTTEIRFEDC---RIHERNRLGQEGEGFKIAMMTLD 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                ++   V +A+     A+ YA+ R   G  +I    +   +AD+A  I A+  L++
Sbjct: 241 GGRNGIAAQAVGIAQGALDAAVDYAKERKQFGKPIIQHQGIAFKLADMATAIEASRLLTY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A    +A    +E+A +++ A  T       A  V  EA++  GG GY ++  + R+ 
Sbjct: 301 QAAWLETKALPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGYGYTKDYPVERYM 353

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 354 RDAKITQIYEGT 365


>gi|127513498|ref|YP_001094695.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638793|gb|ABO24436.1| isovaleryl-CoA dehydrogenase [Shewanella loihica PV-4]
          Length = 389

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P +D +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLSARKEGD-RYILNGNKMWITNGPDADTYVIYAKTDMDKGPHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDC---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  +    +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|297616671|ref|YP_003701830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144508|gb|ADI01265.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 606

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 161/382 (42%), Gaps = 57/382 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A ++      R+   + PK+F   +  T             + LTE   G+D+  I
Sbjct: 131 TTGAAGLIESFGDERLKNMFLPKMFDGSWSGT-------------MCLTEPSAGSDVGDI 177

Query: 215 TSQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL 262
            S+     +  IY + G+K F++    +       + LA+++G       +  F+VP+  
Sbjct: 178 LSKAYPTDNPRIYKIRGNKIFITGGDGNHVENVVHLFLARIDGAASGTKGLSLFVVPKYW 237

Query: 263 --EDGS--PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             EDGS  PN +    +++K+G   ++TV L F       G+LLG  N  TG  + +  +
Sbjct: 238 VNEDGSLEPNDVKAVGVEHKMGLEGSSTVALAFGENDGCRGWLLGSYNAETGEGQGIAQM 297

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILIDQPVMKRAIADI 362
                   L + I +++    +   A  Y + R + G         +I+   ++R +   
Sbjct: 298 FQMMNEERLTTGIFALALAANAYWNAAEYCKER-IQGRNQQGERTAIINHEDVRRMLLLN 356

Query: 363 ALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                A  A+  + +   D AK       R   AA    + P+ K +    A  +IAE++
Sbjct: 357 KATSEACRAIIMKTSYYMDVAKHDMDNGRRKAAAAMVDCLIPLAKAYPSDEAWTLIAESI 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLE 473
           +  GG GY EE  +A+  R+    SI  G+     +D++     L KG+ +F     ++E
Sbjct: 417 QAHGGYGYCEEYPVAQAARDCKVLSIWEGTNFIQGMDLVGRKWNLGKGS-VFNAFLKSIE 475

Query: 474 QDLGSSGKKVITILRDSISLCK 495
            D   + K   T+ ++  +L +
Sbjct: 476 -DFIEANKTEETLKKELANLAR 496


>gi|138894126|ref|YP_001124579.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134265639|gb|ABO65834.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 398

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+A+I +   +  D  Y L+G K W   + ++D F++ A  +       +
Sbjct: 123 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R +      G   + +K K+G RS  T EL F N     +   N+     E  K
Sbjct: 182 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 233

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+   +V+   V L  A     + Y   R   G  +    ++++ IA +   + 
Sbjct: 234 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E
Sbjct: 294 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNE 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ R S A  I  G+
Sbjct: 347 YPVERYLRNSKAPVIYEGT 365


>gi|87198153|ref|YP_495410.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133834|gb|ABD24576.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 572

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 56/321 (17%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLS 229
           + PK+ S E+  T             + LTE + G+D+ A+ S    I++G     Y ++
Sbjct: 148 YLPKLISGEWSGT-------------MNLTEPQAGSDVGALRSTATPITEGPHAGKYRIA 194

Query: 230 GHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQ 273
           G K F++    DA      ++LA+  G       +  F+VP+  + +DGS    N +   
Sbjct: 195 GTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVEQDGSLGARNDVRCV 254

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G  ++ T  + + +     G ++G  N   G +  M     ++SA ++V    V
Sbjct: 255 SIEHKLGIHASPTCVMSYGDNGECIGEMVGHEN---GGLRAM--FTMMNSARINVGSQGV 309

Query: 331 SLAE-----AIHYARRRHVS---GG------ILIDQPVMKRAIADIALDIAAATALSFRL 376
            +AE     A  YAR R  S   G        +I+ P ++R +  +      + AL +  
Sbjct: 310 QIAERAFQQARTYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGSRALLYYT 369

Query: 377 ANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A   D     +E A   A ++ P+ K W   +   V +  ++  GG G+IEE   A+H R
Sbjct: 370 AGQVDRGALGNEAAQKRAELLVPMLKAWGTDIGCEVASLGIQVHGGMGFIEETGAAQHLR 429

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +S    I  G+      D++ 
Sbjct: 430 DSRIAPIYEGTNGIQAADLVT 450


>gi|14324885|dbj|BAB59811.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 420

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 16/262 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGR-------V 253
           +TE  GG+D+  +           Y L+G K F+     +D F+  A  +         +
Sbjct: 126 ITEPSGGSDLFGMMKTTAVKKGNKYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGI 185

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R     +P GL  + L   +GN+   T  + + +       L+G+LN       
Sbjct: 186 SAFIVDR----DTP-GLKVETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M I   L +A  S+     +L  A  YA +R   G  LI+   +   +A+    + +A+
Sbjct: 241 RMMIPERLTTAAGSLGVSTAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSAS 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL +  A + D  +      +YAR +  + K    +    ++ +AM+ +GG GY     I
Sbjct: 301 ALVYTAAKAADLYEKGQTTQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPI 360

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R  R+S    I  GS   M +
Sbjct: 361 ERLLRDSRLGLIWTGSSEVMKM 382


>gi|282865002|ref|ZP_06274055.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559925|gb|EFB65474.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+ +       
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTDAPRPDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L   L+ D    G    R  +K+G + + T EL F         D+ V   PVED
Sbjct: 184 RHGISL---LVVDTKSEGYSVGRKLDKLGLKVSDTAELSFV--------DVKV---PVED 229

Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     K   YL           A+ + +    ++  A  Y + R V G  +      K 
Sbjct: 230 LLGEENKGFSYLGQNLPQERLGIAVGAYAQASAAVRFAQQYTQDRTVFGKTVASFQNTKF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A    ++ AA A+  R   + D  +    EAA A++       +C ++A  VI   ++
Sbjct: 290 ELAACKAEVDAAEAVCDRAIEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 343 LHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375


>gi|120405159|ref|YP_954988.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957977|gb|ABM14982.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 382

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 20/265 (7%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
           +V   + +TE   G+D+A + +   +  D  Y ++G K F++  M +D  I++A+     
Sbjct: 119 TVLTAIAMTEPGTGSDLAGMRTTAVRDGDD-YIVNGAKTFITGGMQADLVIVVARTSTDP 177

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
              R G  L+  ++EDG  +G    R   K+G +   T EL F +       +LG+++ +
Sbjct: 178 DNRRKGLTLL--VVEDGM-DGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEA 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +        L  A+ SV+  R ++A AI Y + R   G  +      K  +A  + +
Sbjct: 235 FGYLGHNLAQERLTVAVGSVAQARSAIAAAIEYTQSRKAFGTPVASFQNTKFELAACSTE 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA A+        D A S   E   +   A  TK +C +M   V+   ++  GG GY+
Sbjct: 295 VEAAQAM-------LDRAVSLHVEGELSGADAARTKLFCTEMQQRVVDRCLQLFGGYGYM 347

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IAR Y ++    I  G+   M
Sbjct: 348 MEYPIARLYTDARVARIYAGTSEVM 372


>gi|33600412|ref|NP_887972.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33568011|emb|CAE31924.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 418

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
            GLTE   G+D   + ++  K  DG Y L+G+K W  +SP++D F++ A+      +G++
Sbjct: 158 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
             F    +LE G   GL    +  K+G R++ T E+   E   +   ++  ++   GP  
Sbjct: 217 RGF----ILEKGM-KGLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 269

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  +
Sbjct: 270 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 325

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        RL    DE  +  E       +  I K   C  A  +   A + +GG+G  
Sbjct: 326 ITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 378

Query: 426 EERSIARH 433
           +E  +ARH
Sbjct: 379 DEFGVARH 386


>gi|327450343|gb|EGE96997.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA2]
          Length = 382

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDLDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|308447060|ref|XP_003087326.1| hypothetical protein CRE_15258 [Caenorhabditis remanei]
 gi|308257394|gb|EFP01347.1| hypothetical protein CRE_15258 [Caenorhabditis remanei]
          Length = 408

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 24/226 (10%)

Query: 222 SDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLV---PRLLEDGSPNGLCYQRLKN 277
           ++G + ++G K   L    +D F++ A  +G+   F+V   P +    SP          
Sbjct: 197 NNGQFSITGEKTLVLLGATADLFLVSADFKGQADVFVVKRDPSITVKKSP---------- 246

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +G ++  TV L+F NT    LGD + +     D+  L++   A+ S   ++     +I 
Sbjct: 247 AMGLKATETVTLKFDNTPAQRLGDEDFNYPAFLDLGNLMWCAMAVGSCEAVK---DYSIK 303

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +  +  +   IAD+A++I A   L    A+  +  +    EA  AR++ 
Sbjct: 304 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGQPFHREAYLARLL- 362

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 C + +  +  + ++ +GG G+ +E    R YR+  A ++L
Sbjct: 363 ------CAEKSMKIATDGVQILGGHGFTKEHPAERWYRDLRATAVL 402


>gi|297161117|gb|ADI10829.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 23/282 (8%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           D+AP    +   P     M    +  G  +TE   G+D+A +T   ++++DG + LSG K
Sbjct: 105 DFAPPDTRKRLLPR----MCSGELIAGNAMTEPESGSDVARLTVTARRVADG-FLLSGTK 159

Query: 233 WFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            F+S+ P++D F+  A  + + G   V   ++E G+P GL   +  +K+G  S     + 
Sbjct: 160 SFVSNGPVADVFVTYATTDPQAGHLGVTAFVVERGAP-GLAVGQPLDKMGLLSCPAAAVT 218

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI----LIYLDSAIMSVS-GMRVSLAE-AIHYARRRHV 344
           F + F   + D  V   P +   I    + +  S + +V  G++  L +  + + R+R  
Sbjct: 219 FDDCF---VPDEQVLGAPGQGGAIFQHSMRWERSCLFAVYLGVQQRLLDRCVEHVRQRRQ 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
           SG  L +   +   + D+ L + +   L +R  ++ D       +   A +   ++K   
Sbjct: 276 SGKRLAEFQSVSNRVVDMKLRLESGRLLLYRACDALD------RDDPDASLWVSLSKLAV 329

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + A A   +AM+  GG G + E  I    R++   ++  G+
Sbjct: 330 SEAAVASSLDAMQLFGGRGCLREEGIEAAVRDALPTTVFSGT 371


>gi|260555429|ref|ZP_05827650.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411971|gb|EEX05268.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 383

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V     D    G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +
Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|229064992|ref|ZP_04200290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229170051|ref|ZP_04297742.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228613398|gb|EEK70532.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228716293|gb|EEL68005.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 376

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|51230630|ref|NP_001003743.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio
           rerio]
 gi|50925422|gb|AAH79521.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Danio rerio]
          Length = 405

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 36/273 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  Q+  +  + L+G K W  +S  + A ++ A  +       +
Sbjct: 145 FALSEPGNGSDAGAASTLAQQEGNE-WVLNGTKAWITNSWDASATVVFATTDKSLKHKGI 203

Query: 254 GCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
             FLVP       P+ GL   + ++K+G R+++T  +   +     G +LG+  +     
Sbjct: 204 SAFLVPM------PHPGLSLGKKEDKLGIRASSTANIILEDCRIPLGNMLGERGMG---- 253

Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIA 363
              KI +  LDS  + ++   + +A+A       YA +R   G  +     ++  +AD+A
Sbjct: 254 --FKIAMQTLDSGRLGIAAQALGIAQAALDCAADYAHKRTAFGAPIGKLQAIQFKLADMA 311

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I +A  L+++ A   D  K  ++EAA A++ A        + A     +A++ +GG G
Sbjct: 312 VAIESARLLTWKAALLRDAKKPFTKEAAMAKLAA-------SEAATFASHQAIQVLGGMG 364

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y+ +    RHYR++    I  G+     L + N
Sbjct: 365 YVTDMPAERHYRDARITEIYEGTSEIQRLVIAN 397


>gi|300933733|ref|ZP_07148989.1| acyl-CoA dehydrogenase-like protein [Corynebacterium resistens DSM
           45100]
          Length = 383

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              +G + +TE   G+D+ +I +  ++  D  Y ++G K
Sbjct: 116 WLPKLASGEF--------------VGAIAMTEPGTGSDLQSIKTTAKRDGDE-YVINGSK 160

Query: 233 WFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            F+++   +D  I++ +   EG  G  LV  ++E     G    R+ NKIG +   T EL
Sbjct: 161 TFITNGSHADLIIVVCRTGEEGHAGISLV--VVETEGLEGFSRGRVLNKIGMKGQDTREL 218

Query: 290 EFSNTFGFLLGDLNVSTGPV--EDMKILIYL---------DSAIMSVSGMRVSLAEAIHY 338
            F         D+ V    +  E+ K  IYL           A+ +++    ++ + I Y
Sbjct: 219 FFQ--------DVRVPAENILGEEGKGFIYLMQQLPQERLSIAVGAIAATEAAIQQTIDY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++R   G     +PV K    +   ++A  T  +  +    D    R          A 
Sbjct: 271 TKQREAFG-----RPVFK--FQNTRFELAECTTEAMAVRTFVDHCIQRHVAGELDPATAS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             KY        +I   ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 324 AVKYLATDKQVEIIDRCLQLFGGYGYMLEYPIARAYADARVQKIYGGTNEIM 375


>gi|188588331|ref|YP_001919795.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|251778721|ref|ZP_04821641.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|188498612|gb|ACD51748.1| butyryl-CoA dehydrogenase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083036|gb|EES48926.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 379

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++  +++ FI+ A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLDGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + + S  G    +L++K+G R ++T EL   +       L+G      G    MK 
Sbjct: 181 ISAFIVEKSFPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + ++   + +AE     A++Y + R      L  Q  ++  IA++ + I AA
Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      +  S +AA A++ A        ++A  V  +A++  GG GY ++  
Sbjct: 296 RHLVYKAACKKQNGQPYSVDAARAKLFA-------AEVAMDVTTKAVQIFGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|281204080|gb|EFA78276.1| acyl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 824

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A+++++  +  D  + L+G K F+S    SD ++++ +  G  G   +  
Sbjct: 568 LTEPGSGSDAASLSTKAVRDGDH-FVLNGSKAFISGGGESDVYLVMVRT-GEKGAKGISC 625

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
           LL +    GL + + + K+G  +  T         +  +N  G      N++   +   +
Sbjct: 626 LLIEKDTPGLSFGKKEEKLGWNTQPTRAVIMEDCRVPVANLIGKEGQGFNIAMNALNGGR 685

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I       S+ G + SL  A  + + R   G  L +   ++  +AD+A  + AA  + 
Sbjct: 686 LNI----GACSLGGAQASLVAARDHLKVRKQFGQPLANFQSIQFKLADMATKLYAARTM- 740

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             L NS     ++ ++AA    MA   K + C     +  EA++  GG GY+++  I R+
Sbjct: 741 --LRNSAKMLDAKDQQAAVYIAMA---KLFTCDTCFEICDEALQLHGGYGYLKDYPIERY 795

Query: 434 YRESPANSILLGSGNAMVL 452
            R++  + IL GS   M L
Sbjct: 796 LRDTRVHRILEGSDAVMRL 814


>gi|225435261|ref|XP_002285017.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 405

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 29/286 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P   + + PK+ S E+              +G L ++E   G+D+ ++  +  ++ DG 
Sbjct: 127 NPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 171

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P++   ++ A+ +       +   ++E G P     Q+L +K+G R 
Sbjct: 172 YILNGNKMWCTNGPIAQTLVVYAKTDITAHSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 230

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++      M+  +   + Y R
Sbjct: 231 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVR 290

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  +AD+   + ++ +  + +A + +  K   ++ A   + A   
Sbjct: 291 QREQFGRPIGEFQFIQGKLADMYTSLQSSRSYVYSVARNCENGKIDPKDCAGVILCA--- 347

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + A  V  +A++C+GG+GY+ E    R  R++    I  G+
Sbjct: 348 ----AERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 389


>gi|86139098|ref|ZP_01057669.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824329|gb|EAQ44533.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 29/284 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ S E             +   + +TE   G+D+  I +   ++    Y LSG K 
Sbjct: 114 WLPKMASGE-------------MVCAIAMTEPSTGSDLQNIKTTA-RLEGNEYVLSGSKT 159

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           F+++   +D  I++A+ +  +G   +  ++ E     G    R   K+G +S  T EL F
Sbjct: 160 FITNGQQADLIIVVAKTDTSLGAKGISLMMVETAEAEGFARGRNLEKLGLKSQDTSELFF 219

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            N       LLG      G  + MK L    L  A+   + M  +L E + Y   R   G
Sbjct: 220 DNVRLPPENLLGGTE-GQGFYQLMKSLPQERLVVALGGAAAMEKALEETVAYTSERRAFG 278

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L++    +  +A++     A  A  F      D+  ++          A + K+W  +
Sbjct: 279 KPLLEMQNTRFKLAEV--KTVAHIARVF-----LDDCVAKHLRGELDATTASMAKWWVTQ 331

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           M    I E ++  GG GY+ E  I+  Y ++    I  GS   M
Sbjct: 332 MQCDTIDECLQLFGGYGYMSEYPISTMYADARVQKIYGGSNEIM 375


>gi|312217731|emb|CBX97678.1| hypothetical protein [Leptosphaeria maculans]
          Length = 535

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 35/301 (11%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           R+ K+W PK+               T+      L+E   G+D  A+ ++  +  +G Y +
Sbjct: 257 RIKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDNG-YKI 301

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K W  +S  +  FI+ A ++       +   + +    G    + + K+G ++++T 
Sbjct: 302 NGSKMWITNSMEAGFFIVFANLDPSKKYKGITAFIVEKGTKGFSIAKKEKKLGIKASSTC 361

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARR 341
            + F +     +   N+     E  K  I  L+   + ++     LA      A  YA  
Sbjct: 362 VINFDDV---EIPKENLLGNEYEGYKYAIALLNEGRIGIAAQMTGLALGAWENAAGYAWN 418

Query: 342 RHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-API 399
                G L+ +   M+  +A    +I AA AL +  A        R +EA    +M A +
Sbjct: 419 DRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAA--------RKKEAGEDFVMDAAM 470

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++A  V + A+E +GG G++ E    +++R+S   +I  G+ N  +  +  LL+
Sbjct: 471 AKLYSSQVAGRVSSSAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIAKLLQ 530

Query: 460 K 460
           K
Sbjct: 531 K 531


>gi|329891079|ref|ZP_08269422.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328846380|gb|EGF95944.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 396

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 22/240 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE  GG+D A++ +    + DG Y L+G K W  +SP++D  I+ A+++G +  F+V
Sbjct: 142 FGLTEADGGSDPASMKTTAVAV-DGGYRLNGGKYWITNSPIADLAIVWAKLDGVIRGFIV 200

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R       +G    ++ +K+  R++ T ++  ++ F   + + N+  G          L
Sbjct: 201 ERDF-----DGFTTGKIGDKLSLRASVTGDIGLNDVF---VPEANILPGVQGLRGPFSCL 252

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALS 373
           + A   ++   +  AE   +A R +V+   L  +P     ++++ +AD+  +I      +
Sbjct: 253 NKARFGIAWGAMGAAEFCFHASRDYVAERTLFGRPLSSRQLVQKKLADMQTEIFLGFEGA 312

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + L    D         A+      + K   C  A AV  EA +  GG+G   E  + RH
Sbjct: 313 YALGRLLD-------TGAWVPEAISLMKRNNCGKALAVAREARDMHGGAGITGELHVMRH 365


>gi|300785738|ref|YP_003766029.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795252|gb|ADJ45627.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 380

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 43/299 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P   S E             +   + ++E   G+D+  + +  ++   G
Sbjct: 102 LTTPEQRRRWLPGFCSGE-------------IITAIAMSEPGAGSDVRGLRTTARR-EGG 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            Y + G K F+S+ +    +M+A       G  G  L+   +E G+P G    R  +KIG
Sbjct: 148 EYVIDGTKTFISNGLLADLVMVACKTDPAAGHRGISLIA--VEAGTP-GFSRGRKLDKIG 204

Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            RS  T EL F++       L+G+ N      +   P E + I      A+ +V+  + +
Sbjct: 205 QRSADTAELIFTDVRVPVDNLIGEENRGFYHLMRNLPKERLGI------AVHAVASAQRA 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
               + YA  R   G  +    V + A+A++   I        +   + +  +  +EEAA
Sbjct: 259 YEITLAYAGDREAFGQPIGKFQVNRHALAEMRTKIDVMRTYLDQCVLAVNAGELTAEEAA 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A       K+W  +    ++   ++  GG GY+ E  IAR +R++    +  G+   M
Sbjct: 319 GA-------KWWTTETQWEILDRCLQLHGGYGYVNEYEIARLWRDARVQRLYGGTTEIM 370


>gi|316933290|ref|YP_004108272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315601004|gb|ADU43539.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 382

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 22/262 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L
Sbjct: 125 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGGDGPGGISTL 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           + D    GL +   + K+G  +  T  + F N        LGD  +        KI +  
Sbjct: 184 VVDKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 237

Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L+    S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L
Sbjct: 238 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A + D       + A A  +  + K +       V  EA++  GG GY+ E  I +
Sbjct: 298 LWRAAAALDR------KDANATKLCAMAKRFATDAGFNVANEALQLHGGYGYLAEYGIEK 351

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R+   + IL G+   M L V
Sbjct: 352 LVRDLRVHQILEGTNEIMRLIV 373


>gi|297746230|emb|CBI16286.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 29/286 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
            P   + + PK+ S E+              +G L ++E   G+D+ ++  +  ++ DG 
Sbjct: 126 NPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 170

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P++   ++ A+ +       +   ++E G P     Q+L +K+G R 
Sbjct: 171 YILNGNKMWCTNGPIAQTLVVYAKTDITAHSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 229

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340
           + T EL F N F      L      V  M   + L+  +++      M+  +   + Y R
Sbjct: 230 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVR 289

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   ++  +AD+   + ++ +  + +A + +  K   ++ A   + A   
Sbjct: 290 QREQFGRPIGEFQFIQGKLADMYTSLQSSRSYVYSVARNCENGKIDPKDCAGVILCA--- 346

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + A  V  +A++C+GG+GY+ E    R  R++    I  G+
Sbjct: 347 ----AERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 388


>gi|229014511|ref|ZP_04171629.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229136161|ref|ZP_04264914.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228647320|gb|EEL03402.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228746861|gb|EEL96746.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 376

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A 
Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMAT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 290 SVEASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364


>gi|212534366|ref|XP_002147339.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
 gi|210069738|gb|EEA23828.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
          Length = 349

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E       +
Sbjct: 83  LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 141

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     LLG+LN        +K+L
Sbjct: 142 SAFIVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 195

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R      +    +++  +AD+   +AA+
Sbjct: 196 MEGLDLERLVLSAGPLGIMQSALDLVLPYTHTRKQFNTPIAHNQLIQGKLADMYTKLAAS 255

Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A ++  A S DE+ +       R+++ A A + A      C         +A++ +GG+
Sbjct: 256 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 308

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI E    R  R++    I  G+
Sbjct: 309 GYINEIPAGRLLRDAKLYEIGAGT 332


>gi|196250644|ref|ZP_03149333.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196209863|gb|EDY04633.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 399

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+A+I +   +  D  Y L+G K W   + ++D F++ A  +       +
Sbjct: 124 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R +      G   + +K K+G RS  T EL F N     +   N+     E  K
Sbjct: 183 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+   +V+   V L  A     + Y   R   G  +    ++++ IA +   + 
Sbjct: 235 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E
Sbjct: 295 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNE 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ R S A  I  G+
Sbjct: 348 YPVERYLRNSKAPVIYEGT 366


>gi|194363937|ref|YP_002026547.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346741|gb|ACF49864.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 397

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 26/242 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE  GG+D A++ ++  +  D         W  S P++D  I+ AQ E  +  F   
Sbjct: 143 FGLTEAHGGSDPASMKTRAVRDGDDWRINGSKMWITSGPVADLAIVWAQTEDGIQGF--- 199

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            +LE G P G   Q +K+K+  R++ T  L F +        L ++    GP      L 
Sbjct: 200 -VLEKGMP-GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGP------LG 251

Query: 317 YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L  A   +S   +      L EA+ YA+ R + G  L      +  +A++A  I  A  
Sbjct: 252 CLTQARFGISWGPIGSAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITMAQL 311

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ +L    +  + + ++ + A       K+  C+MA  +  E  + +GG+G   E    
Sbjct: 312 LALQLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHVAI 364

Query: 432 RH 433
           RH
Sbjct: 365 RH 366


>gi|262278684|ref|ZP_06056469.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259035|gb|EEY77768.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 383

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 16/242 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+    + G   + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTSSDIKGAGGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L 
Sbjct: 183 AFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A +SV      L +++ YA  R   G  + +  +++  +AD   +I AA  +  
Sbjct: 242 KGRLHIAALSVGAATRMLDDSLKYAIERKQFGQPIAEFQLIQAMLADSKAEIYAARCMVL 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +I R Y
Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|226294512|gb|EEH49932.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 425

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F++ R  +   P       +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTFETPAIKNKTALRASITGMIQMDSCPVPEANMFPDVEGLRGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD   D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARSYALERKQFKGNPLAKYQLVQKKLADATTD 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + +++   DE K+  E       M  + K   C  A A      E  GG+   
Sbjct: 336 AAYGTLAAIQVSRLKDEGKAAPE-------MISMIKRQNCDKALAGARTLQEIFGGNVAS 388

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 389 DEYHIGRH 396


>gi|226308382|ref|YP_002768342.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187499|dbj|BAH35603.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 41/272 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A I +  ++  DG  Y L+G K F++  + +D  +++ +      E R
Sbjct: 124 IAMTEPGTGSDLAGIKTTAKRSEDGTHYVLNGAKTFITGGVQADRVLVICRTSPPTAENR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298
                +  L  D S  G    R   KIG R++ T EL F++               FG+L
Sbjct: 184 RAGLSI--LAVDTSSEGYEVGRKLEKIGMRTSDTAELSFTDVRVPAEDLLGEEGAAFGYL 241

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             +L     P E + I +   +A +      +  A A  Y R R V G  + +    K  
Sbjct: 242 ANNL-----PQERLMIAVTQTAAAVGA----IEFASA--YVRDRKVFGQAVAEFQNTKFV 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA+    + AA  +  R     +       +AA A++       +C + A  VI + ++ 
Sbjct: 291 IAECIAKVEAAQCMVDRALELHETGDLSVADAAKAKL-------FCTETAAEVIDKCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR Y ++  + I  G+   M
Sbjct: 344 HGGYGYMLEYPIARLYADTRVSRIYGGTNEVM 375


>gi|167907901|ref|ZP_02495106.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
          Length = 390

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        V     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E      M    K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|167745562|ref|ZP_02417689.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662]
 gi|167654874|gb|EDR99003.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662]
          Length = 383

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252
            GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A     +  GR
Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIIEKRGR 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
               +   +++ G+P G  +   + K+G R ++T EL F +       LLG      G  
Sbjct: 181 KLKEISAFIVDKGTP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKENLLGKQGKGFGIA 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + ++   + LAE      + Y + R   G  +      +  +AD+A 
Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALEATVEYVKERKQFGRTIGQFQNTQFQLADMAT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L ++ A +    K  S EAA A++       +  ++A  V  +A++  GG GY
Sbjct: 295 KVEAAKLLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E  + R  R++    I  G+
Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369


>gi|33598448|ref|NP_886091.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574577|emb|CAE39224.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 389

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D+AA+  + +   DG Y L+G K W  +  ++D + + A+
Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181

Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303
                G   +   + D G+P     +R+     + +     A   +  S   G       
Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           ++      M + I+  S   +  G  R +L E +  AR R + G  L D  + + A+ D+
Sbjct: 242 LAM-----MTLDIFRASVAAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  + A+  L++R A   D  + R+  EAA A++ A        + A AVI  A++  GG
Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +G +   ++ R YRE  A  I  G+     L +   L K
Sbjct: 350 AGVVAGATVERLYREIRALRIYEGATEVQKLIIARELLK 388


>gi|254428631|ref|ZP_05042338.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194800|gb|EDX89759.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 395

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 29/285 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D  +++++ +K+ DG Y L+G K W  +SP++D  ++ A
Sbjct: 130 PKLATGEWVGCFGLTEPDHGSDPGSMSTRAKKV-DGGYLLNGAKTWITNSPIADVAVVWA 188

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-- 305
            ++G++  F+V R  +     G    +++ K   R++ T ++   + F      L+V   
Sbjct: 189 NLDGKINGFVVERGFD-----GFSTPKIEGKFSLRASITGQISLDDCFVPEENRLDVEGL 243

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            GP         L+ A   +S   +  AE     A  Y   R   G  L    ++++ +A
Sbjct: 244 KGPFS------CLNKARYGISWGAMGAAEFCWHAARQYTLDRKQFGRPLAATQLIQKKLA 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I      + +L    D      E       M  + K   C  A  +  +A +  G
Sbjct: 298 DMQTEITLGLQGALQLGRLMDAGDWSPE-------MVSLMKRNNCGKAIDIARQARDMHG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           G+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 351 GNGISDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|167629177|ref|YP_001679676.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167591917|gb|ABZ83665.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 379

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 125/271 (46%), Gaps = 32/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +       GLTE   G+D  ++ +  ++  D  Y L G K F+++   +D ++++A 
Sbjct: 113 PLAEGRSVGAFGLTEPGAGSDAGSLKTIARRDGDD-YILDGTKIFITNGEWADIYVVIAS 171

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +  +        ++E G+P G  + + ++K+G R++ T EL F N     +   N    
Sbjct: 172 TDPAKKHRGTTAFIVEKGTP-GFSFGKKEHKMGIRASYTYELIFENC---RIPAENRLGE 227

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVM 355
             +  KI      A+M++ G R+ +A            +A+ Y++ R   G  +     +
Sbjct: 228 EGQGFKI------AMMTLDGGRIGIAAQALGIAQGAFDQALAYSKTREQFGKPISANQGL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I AA  L ++ A   D     S+++A A++       +  ++A AV  +A
Sbjct: 282 QWMLADMATAIEAARLLVYQAAYLKDAGLPYSKQSAMAKL-------YASEVAMAVTTKA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY  E  + R  R++    I  G+
Sbjct: 335 VQIHGGYGYTREYPVERMMRDAKITEIYEGT 365


>gi|311106012|ref|YP_003978865.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760701|gb|ADP16150.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 384

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 32/325 (9%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PS T+   +  M T  V  +W        + P   +  +  S      LTE   G+D 
Sbjct: 79  VDPSTTAFLTIHNMATWMVG-NWGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266
           A+++++ Q+  D  Y L+G K F+S    +D  +++A+  G     +  F VP       
Sbjct: 134 ASLSTRAQRQGDD-YILNGAKAFISGGGDTDLLVVMARTGGEGAGGISAFAVP-----AD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+ Y R + K+G  S +T  + F N     +   N+     E  KI +  LD   +++
Sbjct: 188 SEGIGYGRKEEKMGWNSQSTRPITFENV---RVPAANMLGQEGEGFKIAMKGLDGGRINI 244

Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V  A+    A RR++         L +   ++  +AD+A  + AA  +    A   
Sbjct: 245 ATCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVAARQMVRLAACKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D        A  A     + K +   M   +  +A +  GG GY+ +  + R  R++  +
Sbjct: 305 DAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDTRVH 358

Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464
            IL G+   M V+    LLEKG ++
Sbjct: 359 QILEGTNEIMRVIIARQLLEKGADI 383


>gi|91781589|ref|YP_556795.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685543|gb|ABE28743.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 376

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE + G+D +A+ +   +  D  Y L+G K F++S  +    ++  V
Sbjct: 111 PLARGDMLGAFCLTEPQAGSDASALRTTATREGDE-YLLNGVKQFITSGRNGHVAIVMAV 169

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
             +      +  F+VP         G    R+++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----DTPGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AQGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFA-------SEAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|255292434|dbj|BAH89552.1| acyl-CoA dehydrogenase [uncultured bacterium]
          Length = 383

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 20/269 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D AAI ++  + +DG Y L+G K F++S  +  A I  A  +   G   +
Sbjct: 123 FALTEPGTGSDAAAIKARAARSNDG-YVLNGAKQFITSARIGGATIAFAVTDPDAGKKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGPVED 311
                + +  GL     + K+G +++ T  L F +     G L+G+    L ++   +E 
Sbjct: 182 SAFYIEQANPGLIVAEPERKLGQKASDTCALTFEDLRLDAGALIGEEGQGLAIALSSLEA 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I I    A  SV   + +L  A  YA  R   G  + +   +   +AD+   + AA  
Sbjct: 242 GRIGI----ASQSVGMAQAALEYATAYALERVTFGKPIFEHQAVAFRLADMDAQVEAARQ 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A + D  +    EA+ A+++A  T       A  VI++A++ +GG GY+ E  + 
Sbjct: 298 LVLNAARTKDLGQPCLREASIAKLIASQT-------AERVISDAIQTLGGYGYLSEYPVE 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R YR++    I  G+ +   +++   L++
Sbjct: 351 RIYRDARVCQIYEGTSDVQRINISRDLKR 379


>gi|254510044|ref|ZP_05122111.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533755|gb|EEE36743.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 380

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D AA+ ++ ++ ++G + L+G K F+S    SDA++ + +  ++G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAERTNEG-FTLNGTKAFISGGGYSDAYVCMVRTGIDGPKGVSTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              +EDG+P GL +  L+ K+G +S  T +++F +    +  D  V T        ++ L
Sbjct: 183 --YVEDGTP-GLSFGALEQKMGWKSQPTAQVQFDDC--KIPADNLVGTEGDGFKYAMMGL 237

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   ++++   +  A+      + Y   R   G  +     ++  +AD+ +++ AA    
Sbjct: 238 DGGRLNIAACSLGAAQYGLDMTLQYMSERKAFGQPIDQFQALQFRLADMEIELQAARTFL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D+       A  A     + K    +    V+ + ++  GG GY+ +  I + 
Sbjct: 298 RQAAWKLDQG------APDATKFCAMAKKLATETGSKVVDQCLQLHGGYGYLADYGIEKL 351

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 352 VRDLRVHQILEGTNEIM 368


>gi|90419691|ref|ZP_01227601.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336628|gb|EAS50369.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 407

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D   +T++ +KI DG Y LSG K W  +SP++D F++ A
Sbjct: 138 PRLATGEYVGCFGLTEPDAGSDPGGMTTRAEKI-DGGYRLSGAKIWISNSPIADVFVVWA 196

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +    + ++  F++     D    GL   +++ K+  R++ T E+           LL +
Sbjct: 197 KSAAHDNKIRGFIL-----DKGMKGLSAPKIEGKLSLRASITGEIVMDGVEVGEDALLPN 251

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           ++   GP         L+ A   +S   +  AE     A  Y   R   G  L    +++
Sbjct: 252 VSGLGGP------FGCLNRARYGISWGAMGAAEDCWKRARDYTMERTQFGRPLAQTQLIQ 305

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +IA     S R+   FD       E A A  M  + K   C  A  +   A 
Sbjct: 306 KKLADMQTEIALGLQGSLRVGRLFD-------EGAMAPEMISLVKRNNCGKALDIARTAR 358

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G + E  + RH
Sbjct: 359 DMHGGNGIMGEYHVMRH 375


>gi|310829333|ref|YP_003961690.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612]
 gi|308741067|gb|ADO38727.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612]
          Length = 379

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIM--LAQVEGR---V 253
            GLTE   G+D     +   +  D  Y L+G K F  + P++D F +  L Q E +   +
Sbjct: 123 FGLTEPNAGSDAGGCITTATREGD-HYILNGAKCFNTNGPLADYFAVYALTQPEKKAKGL 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLV +    G+P G    ++++K+G R+    EL F N     +   N+     +  K
Sbjct: 182 SCFLVKK----GTP-GFSIGKIEDKMGIRAAQVSELIFDNC---KIPAENLMGEEGQGFK 233

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + +  LD   + V+   + LAE     A  Y  +R   G  L     +   + ++   I 
Sbjct: 234 VAMKTLDGGRIGVAAQGLGLAEGAFEIARKYLMQREQFGKPLYKNQYLAFKMVELECQIE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  + ++ A    E +  +  AA A+++       C   A  V  EA++ +GG+GY+++
Sbjct: 294 QARLMLYKAALDKSEGRPYTLSAAKAKLL-------CTDAAMHVTTEAVQMLGGNGYMKD 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R++    I  G+
Sbjct: 347 YHVERMMRDAKITQIYEGT 365


>gi|307565066|ref|ZP_07627579.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
 gi|307346235|gb|EFN91559.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
          Length = 569

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 30/328 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
            + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G   
Sbjct: 170 TMSMDLTEPDAGSDLQRVMLKASFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTKD 229

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  
Sbjct: 230 GRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRLGLIKYVMA 287

Query: 315 LI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L+    L  A  SV   + +  EA+ YA+ R   G  +I+ P +   ++ +   + A  +
Sbjct: 288 LMNGARLGIAAQSVGVSQEAYNEALAYAKERAQFGKKIINMPPVYDMLSRMKAKLDAGRS 347

Query: 372 LSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAE 414
           L ++ A   D  K+              R E   Y R+     PI K    +       +
Sbjct: 348 LLYQTARYVDLYKALEDIARFEKLSPEERQEMKKYTRLADAFTPIAKGMNSEYVNQNTYD 407

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFST 471
           ++   GGSG+I E    R YR++   SI  G+    V+     +  GT L    E L   
Sbjct: 408 SISVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAANRYVMNGTYLGIMREMLAEP 467

Query: 472 LEQDLGSSGKKVITILRD---SISLCKE 496
           + +D+    K++  ++ +   SI+  KE
Sbjct: 468 VSKDMQPLSKRIEKMVEEYESSINKVKE 495


>gi|149378049|ref|ZP_01895772.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357659|gb|EDM46158.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 402

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 27/268 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +   +  DG Y L+G K ++++   +DA ++ A ++   G   +
Sbjct: 132 MAITEPGAGSDSAAIRTTATEDGDG-YILNGEKIYVTAGERADAVVVWATLDRNKGRAAI 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST--GPVEDM 312
              ++E G+P G+  +RL+ K+G R++ T  + F N       LLGD +VS   G    M
Sbjct: 191 KSFVVEKGTP-GMTVERLEKKLGIRASDTAAIRFDNCRVPKENLLGDPDVSVEKGFAGAM 249

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI-------DQPVMKRAIADIAL 364
           +     D+    V+GM + +A A     R  ++  GI +        QP + R +  +  
Sbjct: 250 QT---FDNTRPVVAGMAIGVASAALQKTRELIALTGIDLGYHTQTWTQPAVTRELQLMEA 306

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L+ R A   D     S+EA+ A+  A        ++   V    +E  G  GY
Sbjct: 307 ELEAARLLTLRAAWMADNGLPNSKEASIAKAKA-------GRVGNMVTLRCVELCGSLGY 359

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
            E   + +  R+S    I  G+    +L
Sbjct: 360 GETELLEKWARDSKILDIFEGTQQIQLL 387


>gi|146282280|ref|YP_001172433.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145570485|gb|ABP79591.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 379

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 30/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ +        LTE + G+D +++ ++ ++  D  Y L+G K F++S      +++  
Sbjct: 110 GPLARGEQIGAFALTEPQAGSDASSLRTRARRDGDH-YVLNGAKQFITSGKHAGTVIVFA 168

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295
           V     G+ G   F+VP      SP G    R+++K+G  ++ T ++ F       +N  
Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRL 223

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G       ++   +E  +I I    A  +V   R +   A  YA  R   G  +I+   +
Sbjct: 224 GEEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAGERETFGKPIIEHQAV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  IA A  +          A +  E    A + A + K +  +MA  V + A
Sbjct: 280 AFRLADMATQIAVARQM-------VHHAAALREAGRPALVEASMAKLFASEMAERVCSAA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++ +GG GY+ +  + R YR+     I  G+ +
Sbjct: 333 IQTLGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|13541501|ref|NP_111189.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 417

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 16/260 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGR-------V 253
           +TE  GG+D+  +           Y L+G K F+     +D F+  A  +         +
Sbjct: 123 ITEPSGGSDLFGMMKTTAVKKGNKYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R     +P GL  + L   +GN+   T  + + +       L+G+LN       
Sbjct: 183 SAFIVDR----DTP-GLKVETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFN 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M I   L +A  S+     +L  A  YA +R   G  LI+   +   +A+    + +A+
Sbjct: 238 RMMIPERLTTAAGSLGVSTAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSAS 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL +  A + D  +      +YAR +  + K    +    ++ +AM+ +GG GY     I
Sbjct: 298 ALVYTAAKAADLYEKGQTTQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPI 357

Query: 431 ARHYRESPANSILLGSGNAM 450
            R  R+S    I  GS   M
Sbjct: 358 ERLLRDSRLGLIWTGSSEVM 377


>gi|297160327|gb|ADI10039.1| short/branched chain acyl-CoA dehydrogenase [Streptomyces
           bingchenggensis BCW-1]
          Length = 388

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 37/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
            GLTE  GG+D  A  +  +   + G + ++G K F+++  +D  A I +  V GR    
Sbjct: 125 FGLTEPSGGSDAGATRTTARLDEATGEWVINGTKCFITNSGTDITALITVTAVTGRKPDG 184

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
              +   +VP     G+P GL      +K+G  ++ T EL FS+       LLG+     
Sbjct: 185 SPKISTIIVP----SGNP-GLTVAAPYSKVGWNASDTRELSFSDCRVPADHLLGEKGRGY 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 + L  LD   +++S M   LA     E++ YA+ R   G  +     ++  IAD
Sbjct: 240 A-----QFLQILDEGRIAISAMATGLAQGCVDESVAYAKTREAFGRPIGANQAIQFKIAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +    A     R+A  + +A SR       +  A I K +  ++A     EA +  GG
Sbjct: 295 MEMRAHMA-----RVA--WRDAASRLVRGEPFKKEASIAKLYSSEVAVTNAREATQVHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G++ E  +AR +R+S    + +G G + V  +L
Sbjct: 348 YGFMNEYPVARMWRDS--KILEIGEGTSEVQRIL 379


>gi|218673846|ref|ZP_03523515.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 381

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  ++P ++  ++ A+ +   G   +
Sbjct: 124 LAMSEAGAGSDVVSMRLRAERKGD-RYILNGTKFWITNAPHAEVLVVYAKTDPAAGPKGI 182

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
             L+ E G P G    +  +K+G R + T EL F +       L+G         E +KI
Sbjct: 183 SALIIEKGMP-GFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREG------EGVKI 235

Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD     ++G     M+  L   + Y R R   G  + D  +M+  IAD+ + + +
Sbjct: 236 LMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNS 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A  + +A + D  ++   +AA A + A        + A  V  EA++ +GG+GY +E 
Sbjct: 296 ARAYVYSVARACDAGRTTRIDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEW 348

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 349 PVERFLRDAKLYDIGAGT 366


>gi|119718512|ref|YP_925477.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539173|gb|ABL83790.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 383

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGRVG 254
            GLTE   G+D A + ++  +  D  + L+G K F+++   +D  ++ A+        V 
Sbjct: 123 FGLTEPDNGSDAANLRTRAVRDGDD-WVLNGAKIFITNGTWADVCLVFARTGEPGPRGVS 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLVP  L      G   Q +  K+G R  AT EL F N       +LG         E 
Sbjct: 182 AFLVPTDLP-----GFGRQEIHGKLGLRGQATAELSFDNVRVPADAMLGAEG------EG 230

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI ++ LD   +SV    V + +      + Y+ +R   G  L    +++  IA+I+++
Sbjct: 231 FKIAMHSLDKGRVSVGAGCVGIIQGCLEAVVDYSVQRRQFGRQLASFQLIQDMIAEISVE 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +R A+  +  +    EA+ A       KY+  + A      A++  GG GY+
Sbjct: 291 ADAARLLVWRAADLIERDQPFGTEASKA-------KYFASEAAVRAANLAIQAFGGYGYV 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +E  + ++ R++   ++  G+     L ++   E G + F
Sbjct: 344 DEYPVQKYMRDARVMTLYEGTSQIQKL-LIGRAETGVSAF 382


>gi|332840602|ref|XP_003314022.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 408

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP         GL   + ++K+G R ++T  L F +     +   ++   P    
Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL +
Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALAL 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY+ 
Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 371 EMPAERHYRDARITEIYEGT 390


>gi|260554906|ref|ZP_05827127.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411448|gb|EEX04745.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 607

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 71/366 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246
           L+E + G+ +A I ++  K  DG Y L G+K ++S     +SD  + L            
Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224

Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291
            A V+G +  F VPR L  E+G P   N +    + +K+G R      L F         
Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283

Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +   G L+G+       +  M    +I + L +A +  +G       A+ YA+ R V G
Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338

Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388
                         LI    ++R +      ++ A AL    A      +S ++A+  ++
Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQSNQ 398

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458

Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LD+L     L +G +   L E++ +T+ Q       K    L+D      +   L R
Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIAQ------AKAEPSLKDHADQLDQKWQLIR 512

Query: 503 FLTEKI 508
            +TEK+
Sbjct: 513 NVTEKL 518


>gi|256372243|ref|YP_003110067.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008827|gb|ACU54394.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 401

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 45/301 (14%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-WFLSS 237
           R Y P      Q+ S     GL+E   G+D+  + ++     D  G + LSG K W    
Sbjct: 107 RRYLPGIADGTQRAS----FGLSEAEAGSDVVGMRTRAVPDPDRPGGWILSGRKSWISGV 162

Query: 238 PMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +D + + A+           +  F+V R     S  G+   R+ +K+G     T EL 
Sbjct: 163 RQADWYTVFAKTGDPTSRRHDAITAFIVER-----SWPGVDVPRVDHKMGVHGVDTGEL- 216

Query: 291 FSNTFGFLLGDLNVS----TGPVEDMKILIYLDSAIMSVSGMR-VSLAE-----AIHYAR 340
                  LL ++ V      G V   ++ +   +A+  V   R + LAE     A  Y R
Sbjct: 217 -------LLDEVRVPPENVIGEVGGFRLAMLGLNAMRPVVAARGIGLAEGALMYATTYVR 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG + D   ++  +A +A +I AA  L++R A   D+ +   E   +  +     
Sbjct: 270 NRPAFGGRIADFQGIQWELAKLATEIEAARLLTYRAAWLADQGRFTREWVPFLSM----A 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           KY+  ++A    + A++ +G +GY+ +     +YR++   +I+ G+        LNL+ +
Sbjct: 326 KYYATELAVRASSVALQLLGAAGYMSDHPTELYYRDAKQLTIVEGTSQVQ----LNLIAR 381

Query: 461 G 461
           G
Sbjct: 382 G 382


>gi|168008655|ref|XP_001757022.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691893|gb|EDQ78253.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 365

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 30/263 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVG----- 254
           LTE   G+D A++ +  ++ +    Y L+G K F+S    +D ++++A+  G  G     
Sbjct: 106 LTEPNSGSDAASLQTTARRQAGSTDYILNGEKAFISGGGAADVYLVMART-GEAGPKGIS 164

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTG 307
           CF V     D    GL + R ++K+G RS  T  +   +         G       ++  
Sbjct: 165 CFYV-----DKDSKGLSFGRQEDKLGWRSQPTSSVILDDVRVPERCLIGKEGEGFTIAMS 219

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  SV G +  +  A  Y   R   G  +ID    +  +AD+   + 
Sbjct: 220 ALDGGRINI----ATCSVGGAQFCVDAAQGYVSTRKQFGKAIIDFQNTQFKLADMLTKVQ 275

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+  L    A + D       +A +A   A + K +       V  +A++  GG GY+++
Sbjct: 276 ASRCLVLNAATALD------SKAPWASASAAMAKRFATDECYNVANDALQLHGGYGYLKD 329

Query: 428 RSIARHYRESPANSILLGSGNAM 450
            ++ R+ R+   ++IL G+   M
Sbjct: 330 YAVERYVRDLRVHTILEGTNEIM 352


>gi|116694650|ref|YP_728861.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113529149|emb|CAJ95496.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 378

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QKISD 223
           T    K W P++ S E             +   + ++E   G+D+ AI ++    Q  + 
Sbjct: 98  TEAQKKKWLPQMASGE-------------MVAAIAMSEPGAGSDLKAIRTRAVREQTENG 144

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             Y ++G K F+++   +D   ++A+ +   G  G  LV  ++E     G    R+  KI
Sbjct: 145 DCYRINGAKTFITNGYHADLVCVVAKTDPEAGSRGVSLV--MVETRDLPGFRRGRILEKI 202

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMR 329
           G +   T EL F +        L    G          P E M I      A+ +V+ M+
Sbjct: 203 GQKGQDTAELFFDDVLVPCDNLLGTQEGQGFYQLMQQLPQERMII------ALGAVATMQ 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            ++     Y R R V G  L D       + +    +A    ++   A   D+   R  +
Sbjct: 257 RAIELTTEYVRERKVFGQPLAD-------LQNTRFKLAECKTVATIAATFVDDCMLRLMD 309

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K+WC +    VI E ++  GG GY+ E  IAR Y  +  + I  GS   
Sbjct: 310 GKLDAATAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEI 369

Query: 450 M 450
           M
Sbjct: 370 M 370


>gi|89069339|ref|ZP_01156698.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
 gi|89045106|gb|EAR51177.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
          Length = 386

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K  D +Y L+G+K W  +   ++  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVGMKLRAEKRGD-VYVLNGNKYWITNGGEAETLVVYAKTDPEAGSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G       +K+G R + TVEL F +     +   NV     + +++L+  
Sbjct: 187 TAFLVEKGFAGFSQSPHFDKLGMRGSNTVELVFEDV---EVPAENVLGAEGKGVRVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   L E + Y R R   G  +    +M+  IAD+   +  A A 
Sbjct: 244 LDYERVVLSGIGTGIMAACLDEIMPYLRERRQFGQPIGSFQLMQGKIADLYTKLNTARAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  + A  V  +A++ +GG+G++ E  ++R
Sbjct: 304 VYEVARACDRGQVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGFMNETPVSR 356

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 357 IFRDAKLMEIGAGT 370


>gi|84501840|ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389835|gb|EAQ02469.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 388

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 42/301 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           TP     W P I S E           T+VA+    TE   G+D+A + ++   + DG  
Sbjct: 113 TPEQKARWMPSIVSGEM---------ITAVAV----TEPGAGSDVAGMRTRA--VQDGSD 157

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           + L+G K F+++ +  D + + A+ +    G  G  +    +E G+P G    R  NK G
Sbjct: 158 WVLNGTKMFITNGVHGDLYFVGAKTDPDAKGSRGITMFA--VEKGTP-GFSVGRALNKTG 214

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLA 333
              + T EL F         +LG++N     V    ++ +I++      M+ +  + +L 
Sbjct: 215 WLCSDTAELIFEEVRIPTENVLGEVNHGFYSVMKNFQNERIVL----GAMACAEAQTALD 270

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y ++R   GG L D+  +++ +AD    I A   L +  A      +   +E +  
Sbjct: 271 ITVDYVKQRKAFGGALWDKQAVRQRLADCQTRIVAGRQLVYHAAGLDAAGRDCVKEVS-- 328

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                + K +C ++  +V+ + ++  GG GY+ E  + R  R++   +I  G+   M+ +
Sbjct: 329 -----MVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIGGGASEVMLEE 383

Query: 454 V 454
           V
Sbjct: 384 V 384


>gi|311692893|gb|ADP95766.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
 gi|311693896|gb|ADP96769.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 389

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 32/288 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S E+              IG L ++E   G+D+ ++    +   D  
Sbjct: 110 TEEQKQKYLPKLVSGEH--------------IGALAMSEPNAGSDVISMKLTAKDEGDH- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P ++ +++ A+ +   G   V   + +    G    +  +K+G R +
Sbjct: 155 YLLNGNKMWITNGPDANTYVIYAKTDTSAGSRGVTAFIVERDAPGFSRHQKLDKLGMRGS 214

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHY 338
            T EL F +     +   NV  G     K+L+  LD   + +SG     M+ ++   + Y
Sbjct: 215 NTCELVFQDC---KVPKENVLGGVGNGAKVLMSGLDYERLVLSGGPLGIMQAAMDVVVPY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  + +  +++  +AD+   +  A +  + +A S D     + + A   I+  
Sbjct: 272 IRERKQFGQAIGEFELVQGKVADMYTWMNTAKSYVYMVAMSADRGAETTRKDAAGAIL-- 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +  +MA  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 330 ----YSAEMATKIALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 373


>gi|157364682|ref|YP_001471449.1| acyl-CoA dehydrogenase domain-containing protein [Thermotoga
           lettingae TMO]
 gi|157315286|gb|ABV34385.1| acyl-CoA dehydrogenase domain protein [Thermotoga lettingae TMO]
          Length = 379

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 25/266 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           +Q T +     LTE   GTD AA      ++ D  Y L+G K F+++   +D FI+ A  
Sbjct: 115 LQGTKIG-AFALTEPNAGTD-AASQQTTARLQDNHYVLNGSKVFITNAAHADVFIVFAMT 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +       +   + +   +G    ++++K+G R ++T EL F N       LLG+  +  
Sbjct: 173 DRSKATKGISAFIVERGFDGFRIGKIEHKMGIRGSSTAELVFDNCKVPRDNLLGEEGMG- 231

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
                 KI +  LD   + V+   + +AE      + Y + R   G  L     ++  IA
Sbjct: 232 -----FKIAMSTLDGGRIGVAAQALGIAEGAFNECVKYMKDRKQFGKTLSSFQGLQWYIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  I AA  L ++ A       S + +AA A++ A        +++  V    ++  G
Sbjct: 287 EMATQIEAARNLVYKAAWKKQNNLSHAVDAAMAKLFA-------SEISMKVTTTVVQIFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY ++  + R  R++    I  G+
Sbjct: 340 GYGYTKDYPVERMMRDAKITQIYEGT 365


>gi|311106637|ref|YP_003979490.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761326|gb|ADP16775.1| acyl-CoA dehydrogenase FadE25 2 [Achromobacter xylosoxidans A8]
          Length = 387

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 41/268 (15%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----E 250
           A+   L+E+  G+D AA+++      DG + + G K W  +   S  FI+ A+       
Sbjct: 123 AVNFALSERGAGSDAAALSTTAVPEGDG-WRIRGEKCWLGNGGHSRYFIVFARTGEPGAR 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--LLGDLNVSTGP 308
             +  F+V R        G+     ++K+G R   T  L+     G   ++G L      
Sbjct: 182 NNISAFVVDR-----DAPGVVVDHYEDKMGIRGTTTTNLKVDTWVGAESVVGALG----- 231

Query: 309 VEDMKILIYLDSAIMSVSGMRV----------SLAEAIHYARRRHVSGGILIDQPVMKRA 358
            E +K+ +    A +S+  + V          S AEA  +A +R   G  +ID   +   
Sbjct: 232 -EGLKLAL----ATLSIGRVVVAAQANGIALCSYAEARDFAVQRQTFGRSIIDHQGVGFK 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD A  ++++  +++  A ++D  +      A A+++A  T +       +V+ +AM+ 
Sbjct: 287 LADAATALSSSRMMTYEAARAYDAGQDIGTLGAMAKLLASETSH-------SVVDDAMQI 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
           + G GY++  ++ R YR+     I  G+
Sbjct: 340 LAGRGYVKPSAVERCYRDQRITEIYEGT 367


>gi|238923142|ref|YP_002936655.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656]
 gi|238874814|gb|ACR74521.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656]
          Length = 389

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 27/285 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           F  E       P   +   IG  GLTE   GTD  A   Q + + DG  + L+G K F++
Sbjct: 101 FGTEEQKKKYVPDLASGKKIGAFGLTEPGAGTD--AQGCQTKAVLDGDEWVLNGSKCFIT 158

Query: 237 S-PMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  ++D +I++A         GR        +++ G+P G  +   + K+G R ++T EL
Sbjct: 159 NGKVADVYIIIAITSITEDKRGRKKKNFSAFIVDKGTP-GFSFGTKEKKMGIRGSSTYEL 217

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARR 341
            F +       LLG       P+     +  LD   + ++   + +AE      I Y + 
Sbjct: 218 IFEDARIPKNALLGKEGRGF-PI----AMHTLDGGRIGIAAQALGIAEGALERTIEYTKE 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  Q   +  +AD+A  I AA  L +  A    E  +++ + +Y+ + A   K
Sbjct: 273 RKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAMKKAEF-AKNPKVSYS-VDAAKAK 330

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A AV  E ++  GG GYI E  + R  R++    I  G+
Sbjct: 331 LFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAKITEIYEGT 375


>gi|229492562|ref|ZP_04386365.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229320548|gb|EEN86366.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 383

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 15/268 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           P   T   +G +G+TE   G+D+ AIT+   +  D  Y ++G K F+++  S   I+LA 
Sbjct: 116 PGMATGEILGAIGMTEPGTGSDLKAITTSAVRDGDH-YVVNGSKTFITNGGSADMIVLAV 174

Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL- 302
           + + + G   V  L+ D     G    R+ +K+G     T EL F++       LLG+  
Sbjct: 175 KTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGESE 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  G +    +   L     ++  +  ++ E + Y + R   G  L +         + 
Sbjct: 235 GLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYTKARQAFGHSLFE-------FQNT 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++A    ++       D               A + KYW  +   AV+   ++  GG 
Sbjct: 288 AFELAECQTIARTCRVFLDNCIEDHLNGELDGADAAMVKYWLTEQQCAVVDRCVQLYGGY 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y +S    I  G+   M
Sbjct: 348 GYMREYPIARMYEDSRVQKIYAGANEVM 375


>gi|45656266|ref|YP_000352.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599500|gb|AAS68989.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 394

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 43/281 (15%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVG 254
           G+G+TE   GTD+  + +   K  D  Y L+G K ++++  +   F++ A+++    R  
Sbjct: 132 GMGMTEPGAGTDVLGMRTIAVKKGDK-YVLNGSKQYITNGNVGSVFLVYAKMDKDSKRTT 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F+V     + S  G    + + K+G RS+ T +L F         D  V   P E++  
Sbjct: 191 SFIV-----ESSFPGFSVGKKEEKMGMRSSPTTQLIFE--------DCEV---PAENLVG 234

Query: 313 -------KILIYLDSAIMSVSGMRVSLAE------AIHYARRRHVSGGILIDQPVMKRAI 359
                   ++  L+   ++++   + +A+      A +  R R   G  L +   ++R +
Sbjct: 235 QEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTIRHREAFGKKLSEFGQIQRLL 294

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+   D  AA AL +++A+        S  AA A+++A        +MA  V   A++ +
Sbjct: 295 AESYADYQAARALVYQVASGIHPESRNSLGAASAKLVA-------TQMAERVSRNAIQAL 347

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  E  + R +R+S   SI  G+  AM  +++  L+K
Sbjct: 348 GGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKK 388


>gi|258651953|ref|YP_003201109.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258555178|gb|ACV78120.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 396

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 35/278 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G GLTE   G+D  A  ++   + DG + ++G K F+++  S +   L  V  R G    
Sbjct: 123 GFGLTEPGAGSDAGATRTKADLV-DGEWIINGAKQFITNSGS-SITSLVTVTARTGERTG 180

Query: 259 PR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
            R      ++  G+P G   +   +K+G   + T  L F       SN    LLG+    
Sbjct: 181 GRPEISTVIVPAGTP-GFLVEPAYHKLGWHISDTHPLTFIDCRVPESN----LLGERGRG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
                  + L  LD   ++++ + V L +A     + YA  RH  GG +  +  +   IA
Sbjct: 236 Y-----AQFLSILDDGRVAIAALAVGLIQACVDLCVQYATDRHTMGGPIGRKQGVAFPIA 290

Query: 361 DIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           D+ + + A+ AL++R A   D        +   A  +  A + K +  + A      A +
Sbjct: 291 DLEVMLHASRALTYRAAAMKDAMLAGHPGAPTVARFKHAAAVAKLYSSESAVTATRIATQ 350

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             GG G++EE  +AR YR+  A  + +G G + V  +L
Sbjct: 351 VFGGYGFMEEYPVARFYRD--AKILEIGEGTSEVQRLL 386


>gi|224370913|ref|YP_002605077.1| Acd11 [Desulfobacterium autotrophicum HRM2]
 gi|223693630|gb|ACN16913.1| Acd11 [Desulfobacterium autotrophicum HRM2]
          Length = 405

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256
           G G+TE   G+D+ A+ +  +   D  Y L+G K W  ++ ++D  I  A  +  +G   
Sbjct: 141 GFGITEADAGSDVMAMATTAEDKGDH-YLLNGSKTWISNAAIADVLICYAYTDKSIGTKG 199

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L   ++E  +  G+    L+ K+G+ S+ T E+   N     +   N+     +  KIL 
Sbjct: 200 LSAFVIEPKNFPGISTSALE-KLGSHSSPTGEVFLDNV---KVPKENLLGKSGDGAKILF 255

Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L +A   V   +  L EAI Y   R   G  +    + +  IA +A +I AA 
Sbjct: 256 GSLNHTRLSAAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAAR 315

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +R A   D+    +       +     KY   ++A      AM  +G  GY  E  +
Sbjct: 316 FMVYRAAFEKDQGNINN------GLDVAKAKYLAGEVATKASNFAMRILGAYGYSTEYPV 369

Query: 431 ARHYRESPANSILLGSGN 448
           AR YR++P  S++ GS N
Sbjct: 370 ARFYRDAPTYSMVEGSAN 387


>gi|111022170|ref|YP_705142.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821700|gb|ABG96984.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 611

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 43/287 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGASRTKAIKQDDGSWHIEGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+        E G  NG+    +++K+G + +AT E+ F        G+L+
Sbjct: 224 TKGLSLFFVPKTHFNFETNELGERNGVFVTNVEHKMGLKVSATCEVTFGGHGIPAQGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
           G+++     + D+     +     +++ +      A+ YA+ R V G  L          
Sbjct: 284 GEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALDYAKER-VQGADLTQMTDKAAPR 342

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARIMAPI 399
                 P ++RA+A          A+    A   DEA ++      ++ A+    ++ PI
Sbjct: 343 VTITHHPDVRRALAMQKAYAEGLRAVYLYTAAHQDEATAKLVSGADKDLAFRVNDLLLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K    + A   + ++++  GGSG++++  I ++ R++  +S+  G+
Sbjct: 403 VKGVGSERAYQYLTDSLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|260906698|ref|ZP_05915020.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 383

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-----GR- 252
           GL+E+  G+D A++ ++   ++DG  + L+G K W  ++ +S+ + ++A  +     GR 
Sbjct: 126 GLSEREAGSDTASMKTRA--VADGDDWILNGVKTWITNAGVSEYYTVMAVTDPDGARGRN 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+V +     S  G  +   + K+G + + T EL F N    L GD  +   P E +
Sbjct: 184 ISAFVVEK-----SDEGFTFGEKERKLGIKGSPTRELLFDNVR--LPGDRIIGD-PGEGL 235

Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  LD   ++++   V +A+     AI Y + R   G  + +   ++  +AD+ + +
Sbjct: 236 KIALRTLDHTRVTIAAQAVGIAQGALDYAIGYVKERQQFGKNIAENQAIQFMLADMGMKL 295

Query: 367 AAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            AA  L++  A     AKS+   E+  Y        K +    A  +  +A++ +GG+GY
Sbjct: 296 EAARQLTYTAA-----AKSQRMDEDLTY---FGAAAKAFASDAAMEITTDAVQLLGGAGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
           + +  + R  R++    I  G+
Sbjct: 348 VVDHPVERMMRDAKITQIYEGT 369


>gi|55377615|ref|YP_135465.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230340|gb|AAV45759.1| acyl-coA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 382

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 35/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG--- 254
             L+E   G+D+ A+ +  + +  G  Y ++G K W  +  ++D  ++ A+ +   G   
Sbjct: 123 FALSEAGAGSDVPAMDTTAEPVDGGDAYLVNGGKLWISNGSVADTVVLFAKTDPEAGNKG 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
              F+V R  ED   +G   +  ++K+G++   T EL F         +LG+     G V
Sbjct: 183 ISSFIV-RPEED---DGFIVEGTEHKLGDKGCPTAELRFDEMRIPADRMLGE--EGRGFV 236

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362
             +K L    +  A   V   + +L EA+ YA+ R        DQP+     ++  +AD+
Sbjct: 237 HALKTLNGGRITIAARGVGIAQAALDEALQYAQDRE-----QFDQPISDFQAIQHKLADM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                AA  L  + A+     +S  +EAA A++       +  +++  V  E ++  GG 
Sbjct: 292 DTKTQAARLLMHQAADKKMAGESFVKEAAQAKL-------YASEVSREVANEGIQVHGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY ++    R YR++  N I  G+   +
Sbjct: 345 GYTKDFPAERFYRDAKLNEIYEGTSEVL 372


>gi|33603388|ref|NP_890948.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577512|emb|CAE34777.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 389

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D+AA+  + +   DG Y L+G K W  +  ++D + + A+
Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181

Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303
                G   +   + D G+P     +R+     + +     A   +  S   G       
Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           ++      M + I+  S   +  G  R +L E +  AR R + G  L D  + + A+ D+
Sbjct: 242 LAM-----MTLDIFRASVAAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  + A+  L++R A   D  + R+  EAA A++ A        + A AVI  A++  GG
Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +G +   ++ R YRE  A  I  G+     L +   L K
Sbjct: 350 AGVVAGATVERLYREIRALRIYEGATEVQKLIIARELLK 388


>gi|299531325|ref|ZP_07044735.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298720732|gb|EFI61679.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 387

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
             L+E   G+D+AA+  + +   D  Y ++G K W  +  ++D +++  +     G   L
Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAAGSRGL 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E G+P     +R+ N I    +    L+FSN       L+G      G    M+ 
Sbjct: 189 SALIVEAGTPGFEIAERI-NVIA--PHPLARLKFSNCRVPATQLVG--AAGEGFKVAMRT 243

Query: 315 LIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +++ + S G  R ++ EA+  A  R + GG+L D  + +  +A +A  I +A  L
Sbjct: 244 LDVFRTSVAAASLGFARRAMDEALQRATSRKMFGGVLADFQLTQAKLAQMATQIDSAALL 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D+ ++ + EAA A++ A        + A  VI  A++  GG G + E+ + R
Sbjct: 304 TYRAAWLRDQGENVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGVVSEQPVER 356

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 357 LYREIRALRIYEGA 370


>gi|326778232|ref|ZP_08237497.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326658565|gb|EGE43411.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 608

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  I  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  F+VP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356
            +   G  +  +I+ +  +     +++ +      A+ YA+ R V G  L   +D+   K
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399
             I    D+  +L    A A   R        + ++  E ++  E+A        ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K +  + +   +A++++  GGSGY++E  + ++ R++  +++  G+      D      
Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460

Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509
           + ++G +L     +TL +++     G+ G + +    DS++    D    +   +T+  A
Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515

Query: 510 LASSAAALYRAGMN 523
                  +Y+ G+N
Sbjct: 516 TGEDVKNIYKVGLN 529


>gi|261418773|ref|YP_003252455.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297531264|ref|YP_003672539.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319765590|ref|YP_004131091.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261375230|gb|ACX77973.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297254516|gb|ADI27962.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317110456|gb|ADU92948.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 399

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+A+I +   +  D  Y L+G K W   + ++D F++ A  +       +
Sbjct: 124 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R +      G   + +K K+G RS  T EL F N     +   N+     E  K
Sbjct: 183 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 234

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+   +V+   V L  A     + Y   R   G  +    ++++ IA +   + 
Sbjct: 235 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E
Sbjct: 295 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNE 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ R S A  I  G+
Sbjct: 348 YPVERYLRNSKAPVIYEGT 366


>gi|111020014|ref|YP_702986.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819544|gb|ABG94828.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 414

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 40/260 (15%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250
           V     LTE   G++ A +T++   + DG + ++G K F++ +P++D F++ A+      
Sbjct: 146 VVASFALTEPEAGSNPAGLTTRA-VLKDGKWTINGTKRFITNAPLADLFVVFARTRPADE 204

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305
               +  FLVP         G+       K+G     T E+ F         D++V    
Sbjct: 205 TGTGIAVFLVP-----ADTAGVVVGPKDKKMGQEGAWTAEVAFD--------DVSVPESA 251

Query: 306 -TGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             G  E+      + S        A ++V   + +L E++ +A      G  + D  +++
Sbjct: 252 LVGGSEEAGYRAAMTSLARGRVHIAALAVGSAQRALDESVAFAAVTKQGGTPIGDFQLVQ 311

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD  + ++A  AL    A  +   + R       RI   + K +C +MA  V   A+
Sbjct: 312 AMLADQQVGVSAGRALVRDAAQKYVSGEDR-------RIAPSVAKLYCTEMAGKVADLAV 364

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GG+GY+ +  + R YRE
Sbjct: 365 QVHGGTGYMRDVPVERIYRE 384


>gi|145221013|ref|YP_001131691.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315442015|ref|YP_004074894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145213499|gb|ABP42903.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315260318|gb|ADT97059.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 611

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 159/372 (42%), Gaps = 50/372 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIDGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+     E G P   NG+    +++K+G + + T EL          G+L+
Sbjct: 224 TKGLSLFFVPKFHFDHETGEPGERNGVFVTNVEHKMGLKISTTCELSLGQHGTPAVGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356
           G+++     + D+     +     +++ +      A+ YA+ R V G  L    D+   +
Sbjct: 284 GEVHDGIAQMFDVIEQARMMVGTKAIATLSTGYLNALAYAKDR-VQGADLTQMTDKTAPR 342

Query: 357 RAIA---DI--ALDIAAATALSFRLANSFDEAKSRSEEAAYAR------------IMAPI 399
             I    D+  +L    A A   R    F      +E A                +M PI
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLFTATHQNAEMAKVVHGIEPDLAVRVNDLMLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K    + A A + E+++  GGSG++++  I ++ R++  +S+  G+      D      
Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462

Query: 457 LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASS 513
           + +KG  L   +   +EQ +   +G   +   R  ++   ED +G+A  LT  + A    
Sbjct: 463 VRDKGVAL-AHVAGQIEQFVKAETGNGRLKAERALLATALEDVQGMAASLTGYLMASQED 521

Query: 514 AAALYRAGMNDI 525
            AA+Y+ G+  +
Sbjct: 522 QAAIYKVGLGSV 533


>gi|319443183|ref|ZP_07992339.1| acyl CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 587

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 60/378 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251
           + L+E   G+ +  +T+   K  DG Y L G K ++S    +       ++LA+  G   
Sbjct: 165 MNLSEPGTGSALGDLTTAATKQEDGTYRLRGDKMWISGGDQEVSENIVHLVLARTGGPGV 224

Query: 252 -RVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             +  F+VP+ L  G P      NG+    + +K+G R      L + +  G+L+G    
Sbjct: 225 KGLSLFIVPKWL--GEPGNLTERNGVTLVGVNHKMGYRGTVNTALNYDDATGYLIG---- 278

Query: 305 STGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------ 348
                E+ + L Y    ++ A + V     +L        R +  G I            
Sbjct: 279 -----EEGRGLFYMFHMMNEARIGVGAGATALGVTGFLHSRDYARGRIQGRPLDAKDPKT 333

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYA----RIMAP 398
               +I    ++R + +       A A+    A   DE  A S  EE   A     ++ P
Sbjct: 334 PAVPIIRHADVRRMLLEQKAYAEGAVAVILYAAKVLDESVAASSPEERTAAHQLLEVLTP 393

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +      + A++ +GGSGY  +  + + YR++  N I  G+     LD+L   
Sbjct: 394 VAKSWPSQWCLEGNSLAIQVLGGSGYTRDYPVEQFYRDNRLNPIHEGTHGIQGLDLLGRK 453

Query: 457 -LLEKGT---NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
            LL+ G+   +L  ++ +T +  L  S  ++   LR   +   E   +A +  +    A 
Sbjct: 454 VLLDGGSGFRDLLGRITATCDG-LADSHPELADPLRSRTTRLAEVTAIA-WEDKDAGTAL 511

Query: 513 SAAALYRAGMNDIADVFL 530
           S A +Y     DI   +L
Sbjct: 512 SNATMYLEAAGDIVIAWL 529


>gi|319794988|ref|YP_004156628.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315597451|gb|ADU38517.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 398

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 27/268 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+     AI   LTE   G+D  A+ ++ ++  D  Y L+G K F+S SP +D  +++A 
Sbjct: 129 PVANADKAICFALTEAEAGSDAGAVQTRAERQGDD-YLLTGRKRFISGSPFADFALVMAS 187

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----SNTFGFL 298
                 +  +  F V    + G P        K   G      + LE       N  G  
Sbjct: 188 TATDPAQREISAFFV----DLGQPGARVESGYKTMAGQSHTGDIVLEACRVPARNMIGEP 243

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              L ++ G +   ++L         V   RV+L +A+ YAR R   G  +     ++  
Sbjct: 244 GRGLALALGRITVNRLL----HCPAMVGLARVALNDALDYARGRRQFGRAISQFQAVQHM 299

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A D+AAA  L    A   D           AR  A + K +C + A  +   A++ 
Sbjct: 300 LANMATDLAAARGLMIATARQIDAGGE-------ARAEASMAKLFCSEAAFRIADSAVQI 352

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG G ++ R +   +R      +L G+
Sbjct: 353 HGGEGIVQGRRVEFLFRMLRMYRVLTGT 380


>gi|239994915|ref|ZP_04715439.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 342

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +  F++ A+ +   G   +
Sbjct: 83  LAMSEPNAGSDVVSMKLKAEKRGD-KYILNGNKMWITNGPDAHTFVIYAKTDPNAGPRGI 141

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G RS+ T EL F +     +   N+     E +++L+  
Sbjct: 142 TAFIVERDFPGFSRAQKLDKLGMRSSNTCELVFEDC---EVPAENILGKEGEGVRVLMSG 198

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  +    +++  +AD+   + AA A 
Sbjct: 199 LDYERLVLSGGPLGIMQSCMDIVVPYIHDRQQFGQSIGQFQLVQGKVADMYTQMNAARAY 258

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 259 VYTVAQSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINEYPTGR 311

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 312 LLRDAKLYEIGAGT 325


>gi|254500692|ref|ZP_05112843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436763|gb|EEE43442.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLRADKKGD-KYILNGSKMWITNGPSADTMIIYAKTDMDAGPKGM 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGEVGKGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A  +V  M+ ++   I Y   R   G  +    +++  +AD+ + + A+ A
Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYVHEREQFGKPIGTFQLVQGKVADMYVSMNASKA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A +       +  + A  +  +A++ +GG+GYI E    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAIL-------YAAENATKMALDAIQLLGGNGYINEYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|167744512|ref|ZP_02417286.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|254299046|ref|ZP_04966496.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|157809078|gb|EDO86248.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
          Length = 395

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           +P++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 APIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               +L  +    GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|328762225|gb|EGF75721.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL099PA1]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  Y + R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQNRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|301061918|ref|ZP_07202648.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444022|gb|EFK08057.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 381

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 33/276 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
           GLTE   G+D A + +   +  +  + +SG K F+++     F ++A V  +      + 
Sbjct: 124 GLTEAGAGSDPAGMRTIAVR-DNAEWIISGEKKFITNGNVARFAVIAAVTDKEKGYKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V   LE+ +P G    R++ K+G  ++ T EL F +       LLG         E 
Sbjct: 183 SFVVD--LEN-TP-GFKVGRVEEKMGILASGTAELIFEDARVPADALLGKEG------EG 232

Query: 312 MK-ILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K +L  L+   + ++       R  L +A+ YA+ R   G  +     ++  +AD+A +
Sbjct: 233 FKQMLTTLNGGRIGIASQAIGIGRSVLEDAVSYAKTREQFGKPITSFQAIQWKLADMATE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L+ R A   D  K   +EAA A++       +    A     E ++ +GG GY 
Sbjct: 293 LDAAELLTLRAAWLEDHKKPYEKEAAMAKM-------YASDAAMRASVEGVQILGGYGYS 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +E  + RH R++    I  G+   M L V   L KG
Sbjct: 346 KEYPMERHMRDAKICQIYEGTNEIMRLVVAKNLTKG 381


>gi|170751475|ref|YP_001757735.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657997|gb|ACB27052.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 409

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y +SG K W  ++P +D F++ A+ +   G  + 
Sbjct: 151 FGLTEPDAGSDPAGMKTKAEKI-DGGYRISGAKMWISNAPFADVFVVWAKSDAHEGA-IR 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL    LK K+  R++ T E+           LL +++   GP       
Sbjct: 209 GFVLEKGM-KGLSAPTLKGKLSLRASTTGEIVMEGVEVGEDALLPNVSGLKGP------F 261

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +IA   
Sbjct: 262 GCLNRARYGISWGAMGAAEDCWHRARSYTLERKQFGRPLAQTQLVQKKLADMQTEIALGL 321

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE +   E       M  + K   C  A  +   A +  GG+G + E  +
Sbjct: 322 QASLRVGRLMDEGRMAPE-------MISLVKRNNCGKALDIARTARDMHGGNGIMGEYHV 374

Query: 431 ARH 433
            RH
Sbjct: 375 MRH 377


>gi|307326656|ref|ZP_07605849.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887640|gb|EFN18633.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           L+E   G+D A +T++  +  D  + L G K W     ++D + +LA+        +  F
Sbjct: 133 LSEPSSGSDAAGLTTRATRDGD-TWTLEGTKAWITHGGIADFYTVLARTGPERTRGISAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G+P GL     ++K+G   + T ++      G  + D        +   I L
Sbjct: 192 LVP----AGTP-GLSAAAPEHKMGMAGSPTAQIHLD---GVRVPDARRIGEEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   V +A     EA+ Y  +R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDAGRLGIAACAVGVAQAALDEALAYTAQRRQFGRPIADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +  S++AA A       K +C   A  +  +A++ +GG GY  +  +
Sbjct: 304 ALYLAAARLRDAGRPFSKQAAMA-------KLFCTDAAMRITTDAVQLLGGYGYTMDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYMREAKVLQIVEGT 372


>gi|53723047|ref|YP_112032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|167821137|ref|ZP_02452817.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|52213461|emb|CAH39507.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        V     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E   A I   I K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELV-ATIC--ILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|76819289|ref|YP_336304.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126445316|ref|YP_001063917.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126456389|ref|YP_001076800.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134278687|ref|ZP_01765401.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167725018|ref|ZP_02408254.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167743956|ref|ZP_02416730.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167829501|ref|ZP_02460972.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850983|ref|ZP_02476491.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167916261|ref|ZP_02503352.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|217422116|ref|ZP_03453619.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226197030|ref|ZP_03792608.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242312535|ref|ZP_04811552.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254184585|ref|ZP_04891174.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254185804|ref|ZP_04892322.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194251|ref|ZP_04900683.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|254263739|ref|ZP_04954604.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254300858|ref|ZP_04968302.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|76583762|gb|ABA53236.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126224807|gb|ABN88312.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126230157|gb|ABN93570.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134250471|gb|EBA50551.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157811334|gb|EDO88504.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157933490|gb|EDO89160.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169651002|gb|EDS83695.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184215177|gb|EDU12158.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|217394347|gb|EEC34366.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225931013|gb|EEH27022.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242135774|gb|EES22177.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254214741|gb|EET04126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        V     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E      M    K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|295706626|ref|YP_003599701.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804285|gb|ADF41351.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 379

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258
            GLTE   G+D     ++   ++DG + ++G K ++++     F+ L  V  R  G   +
Sbjct: 123 FGLTEPNAGSDAGGTETEA-VLNDGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
             ++      G        K+G        L  SNT   +L D+ V   P E++      
Sbjct: 182 SAIIVPTEARGFTVIDNYEKMG--------LHASNTTELVLEDVEV---PEENLLGVRGE 230

Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364
              + L+ LD   + +  M V +A+A +     YA+ R   G  +     ++  +AD+A+
Sbjct: 231 GFKQFLMTLDGGRIGIGAMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAM 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  + ++ A   D+ K  ++EAA       + K +  ++   V ++A++  GG GY
Sbjct: 291 KIELARNMVYKAAWLKDQGKPFTKEAA-------MCKLYASEICMEVASQAVQIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           ++E  + R+ R+  A  + +G G + +
Sbjct: 344 MKEYHVERYLRD--AKLLEIGEGTSEI 368


>gi|167899585|ref|ZP_02486986.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        V     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E      M    K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|31791939|ref|NP_854432.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium bovis AF2122/97]
 gi|121636675|ref|YP_976898.1| putative acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989147|ref|YP_002643834.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|31617526|emb|CAD93636.1| PROBABLE ACYL-COA DEHYDROGENASE FADE9 [Mycobacterium bovis
           AF2122/97]
 gi|121492322|emb|CAL70789.1| Probable acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772260|dbj|BAH25066.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++ +               V     LTE   G+D  A++++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139

Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +   G    Y L G K F+S +  SD ++++A+   EG  G  +   ++E G+P GL +
Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFVVEKGTP-GLSF 196

Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315
              + K+G  +  T ++                      FG  +  LN            
Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR--------- 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +R
Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  R
Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359

Query: 436 ESPANSILLGSGNAMVL 452
           +   + IL G+   M L
Sbjct: 360 DLRVHRILEGTNEIMRL 376


>gi|328544490|ref|YP_004304599.1| acyl-CoA dehydrogenase [polymorphum gilvum SL003B-26A1]
 gi|326414232|gb|ADZ71295.1| Acyl-CoA dehydrogenase [Polymorphum gilvum SL003B-26A1]
          Length = 565

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 38/307 (12%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +W P++ + E+  T             + ++E   G+D+  I ++  +  DG + ++G K
Sbjct: 146 EWIPRLATGEWAAT-------------ICISEPDAGSDVGRIRTRAARAGDG-WTVTGEK 191

Query: 233 WFLSSPMSD-----AFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++S    D        +LA+     G      FLVP    DGS N +  QR++ K+G  
Sbjct: 192 IWISFGDHDMTPRIGHCLLARTGDAPGTRGLSLFLVPNTRVDGSANAITVQRIEEKLGLH 251

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            + T  L F      LLG        +  M  ++ L +A   +     +   A  YA  R
Sbjct: 252 GSPTCALAFEGAEAVLLGAEGRGLPQLFAMIEMMRLSTACQGLGVASGACDTARAYAAER 311

Query: 343 HVSGGILIDQPVMKRAIADI---ALDIAAATAL----SFRLANSFDEAKSRSEEAAYARI 395
              GG      V   A AD+    LD+ A T +       LA + D A+   + A  A  
Sbjct: 312 R-QGGDPAAPAVPILAHADVRRQILDMEARTEVLRLAILELATAMDLARCEPDPAVAADH 370

Query: 396 ------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 M P+ K +  +    V + A++ +GG+GY  E  + +  R++   SI  G+   
Sbjct: 371 AAFAAWMLPLAKNFGGETGFDVASRAIQVLGGAGYTREWPVEQALRDTRIVSIYEGTTGM 430

Query: 450 MVLDVLN 456
             LD L 
Sbjct: 431 QALDFLT 437


>gi|325121788|gb|ADY81311.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 383

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 16/242 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+    + G   + 
Sbjct: 124 LTEPDAGSDAASLKTTAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNPDIKGTSGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L 
Sbjct: 183 AFIVDSQTPGIFLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA  +  
Sbjct: 242 KGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVL 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +I R Y
Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|240168468|ref|ZP_04747127.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium kansasii ATCC 12478]
          Length = 611

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S  S D F     ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ L D      G  NG+    +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283

Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351
           G+++         +E  ++++       +++ +      A+ YA+ R V G  L      
Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395
                     P ++R++           AL    A   D A +       A++       
Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAAKVNDL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M PI K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 399 MLPIVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|205375488|ref|ZP_03228276.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 450

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 41/321 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           +    T +  + + PK+ S EY              IG   LTE   G+D  A  ++   
Sbjct: 122 ITYFGTEKQKQKYLPKLASGEY--------------IGAYCLTEPNAGSDALASKTKAIL 167

Query: 221 ISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            ++G  Y L+G K +++ +  SD FI+ A+V+G+        ++E G P GL     + K
Sbjct: 168 NNEGSHYILNGTKIYITNASFSDTFIVYAKVDGQ---HFTAFIVEKGFP-GLVIGPEEKK 223

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           +G + ++T  +   +       +LG+  +  G V  + +L     +    ++ G   +L 
Sbjct: 224 MGIKGSSTCSVLLEDCLVPKENVLGE--IGKGHVIALNVLNLGRYNLGFAAMGGAIHALD 281

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + + + R   G  + D P  K  I  +A  I AA ++ +R     D      +E A  
Sbjct: 282 TTMAFIKERKQFGRRISDFPASKEKIIKMAARIFAAESIQYRTGGLLDSRLEGLKENALP 341

Query: 394 RIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + +A           I K +  +    V+ E ++  GG+GYI E  I + YR+S  N I 
Sbjct: 342 KEVAAGLMEYIMECAICKVYGSETLDMVVDEGLQLHGGAGYIAEYPIEQMYRDSRINRIF 401

Query: 444 LGSG--NAMVLDVLNLLEKGT 462
            G+   N +VL    LL+K T
Sbjct: 402 EGTNEINRLVLPT-QLLKKLT 421


>gi|89092335|ref|ZP_01165289.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083423|gb|EAR62641.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 389

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 59/317 (18%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           MS +   A ++  M T      + P I S E+             A    LTE   G+D 
Sbjct: 93  MSVTNMVAEVIQAMGTEEQKNKYLPLICSGEF------------AAGSFCLTESGAGSDP 140

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG----CFLVPRLLED 264
           A++ +Q  K +DG + +SG K W  S+  +  F++ A    E + G    CFLV     D
Sbjct: 141 ASMRTQAVKTADG-FSISGTKQWITSAEFAGVFVVWAVTDPEAKKGKGITCFLV-----D 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+     + K+G   +AT E+ F N       +LG LN      +  ++      A
Sbjct: 195 ADAPGITVGPAEKKMGQHGSATNEVHFDNVEVPESAILGKLN------DGFRL------A 242

Query: 322 IMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++G R+ +              A  Y   R   G  + D   ++  IAD   ++ AA
Sbjct: 243 VAELAGGRIGIGSLALGVGLAAMGYATAYTTERKQFGRPISDFQGLQWTIADRYTELEAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A+  +     ++EA+ A++ A       C         A++ +GG GY++E  
Sbjct: 303 RLLLMSAADRKERGLPFAKEASMAKVFASEKANQACY-------SALQLLGGYGYMQEYP 355

Query: 430 IARHYRESPANSILLGS 446
           + R  R+    SI  G+
Sbjct: 356 LERFARDVRITSIYEGT 372


>gi|300711655|ref|YP_003737469.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125338|gb|ADJ15677.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 380

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 27/279 (9%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S +   T   P+ +        L+E   G+D+ A+ +  ++  +      G  W  +  +
Sbjct: 103 SEDQKETYLTPLAEGRDVGAFALSEAGAGSDVPAMETTAERDGEEYVIDGGKLWISNGSV 162

Query: 240 SDAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D  ++ A+ +   G       V R  ED    G   +  ++K+G++   T EL FS   
Sbjct: 163 ADTVVLFAKTDPEAGNRGISSFVVRPEED---EGFLVEGTEHKLGDKGCPTAELRFSEMR 219

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGG 347
                 LG+     G V+ +K L   +   ++++   V LA+A       YA  R   G 
Sbjct: 220 IPESRRLGE--EGEGFVQALKTL---NGGRITIAARGVGLAQAALDDAREYANEREQFGQ 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   +K  +AD+   ++AA  L  + A+     K R EE       A   K +  ++
Sbjct: 275 PIGEFQTIKHKLADMDTKLSAARLLMHQAAD----LKIRDEEFIKEAAQA---KLYASEI 327

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  V  EA++  GG GY ++  + R+YR++  N I  G+
Sbjct: 328 SREVANEAIQIHGGYGYTKDFDVERYYRDAKLNEIYEGT 366


>gi|299770631|ref|YP_003732657.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700719|gb|ADI91284.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 383

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V     D    G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV-----DSQTPGIFLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +
Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|294501279|ref|YP_003564979.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351216|gb|ADE71545.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 379

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258
            GLTE   G+D     ++   + DG + ++G K ++++     F+ L  V  R  G   +
Sbjct: 123 FGLTEPNAGSDAGGTETEAV-LKDGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
             ++      G        K+G        L  SNT   +L D+ V   P E++      
Sbjct: 182 SAIIVPTEARGFTVIDNYEKMG--------LHASNTTELVLEDVEV---PEENLLGVRGE 230

Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364
              + L+ LD   + +  M V +A+A +     YA+ R   G  +     ++  +AD+A+
Sbjct: 231 GFKQFLMTLDGGRIGIGAMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAM 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  + ++ A   D+ K  ++EAA       + K +  ++   V ++A++  GG GY
Sbjct: 291 KIELARNMVYKAAWLKDQGKPFTKEAA-------MCKLYASEICMEVASQAVQIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           ++E  + R+ R+  A  + +G G + +
Sbjct: 344 MKEYHVERYLRD--AKLLEIGEGTSEI 368


>gi|134117393|ref|XP_772923.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255541|gb|EAL18276.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 420

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+A I ++ +K  D  + L+G K W  ++  ++ F +LA  +       G  
Sbjct: 160 VTEPGAGSDVAGIKTRAEKKGDK-WVLNGSKMWITNAGHANWFFVLAITDPEASPSRGMT 218

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G F+V     D   +G+   + +  +G R++ T  + F +    ++ + NV   P E  K
Sbjct: 219 G-FIV-----DADTDGIILGKKEINMGQRASDTRMVTFEDV---IVPEENVLGSPGEGFK 269

Query: 314 ILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +   D     VS   V LA     EA  YA+ RH  G  +I+   +   +AD+A+ + 
Sbjct: 270 IAMKAFDITRPLVSAAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVE 329

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L ++ A + D    R     YA     + K +  K A       ++  GG+G+  E
Sbjct: 330 AARGLVWKAAWAKD---CRQRNTFYAS----MAKAFAGKTAVENANLGVQVFGGAGFNTE 382

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454
             + + YR++    +  G+     L V
Sbjct: 383 MPMEKLYRDAKIYELYEGTSQIQKLIV 409


>gi|326329412|ref|ZP_08195736.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952738|gb|EGD44754.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 55/373 (14%)

Query: 97  VEFHPAWHA-------LLRRSIHDGLHC----------SIWDRSFEPVVRKQAHKIRAAR 139
           V FH  W         L +++   GL C           I D  F  V+ ++  KI A+ 
Sbjct: 28  VPFHDQWEKDGIVPRELWKKAGDTGLLCFDVDEEYGGPGIKDFRFNSVLHEEMAKIGASG 87

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                  +   ++ P ++       + TP     W P   S +             +   
Sbjct: 88  PGFFVHTD---IIVPYISH------LGTPEQKARWLPGCVSGD-------------IITA 125

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +      D  Y L+G K F+S+ + +D  I++A+     G   +
Sbjct: 126 VAMTEPGAGSDLQGVRTTAVDKGDH-YLLNGSKTFISNGINADLVIVVAKTNPEAGAHGI 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R  +K+G ++  T EL F++       LLG+    +G +  M +L
Sbjct: 185 SLLVVERGMEGFERGRNLDKVGMKAQDTAELSFTDVVVPKENLLGE--EGSGFISLMTLL 242

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A ++V+ +   L  ++ YAR R   G     +P+ +       L   A  A  
Sbjct: 243 PQERISVASIAVAAVEQVLELSLDYARTREAFG-----RPIGRFQNTAFTLAEMATEAYL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL    ++A ++        ++A + K+W  ++    + + ++  GG GY+ E  IA+ 
Sbjct: 298 ARLF--LNDAVTQLNAGTADTVLASMAKWWTTELQKKFVDQGVQIHGGYGYMMEYPIAKA 355

Query: 434 YRESPANSILLGS 446
           + +S   +I  G+
Sbjct: 356 FIDSRIQTIYGGT 368


>gi|296282905|ref|ZP_06860903.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium
           bathyomarinum JL354]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 40/272 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGC 255
           + +TE   G+D+ +IT+   K  +G Y ++G K ++S+  ++D  I++A+    E   G 
Sbjct: 126 IAMTEPGVGSDLQSITTTALKDGNG-YKINGAKTYISNGQIADFIIVVAKTDPNERAKGI 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------------GF--LLG 300
            L+  LLE     G    +  +KIG  S  T EL F + F             GF  L+G
Sbjct: 185 SLM--LLETEGAEGFQRGKKLDKIGLDSQDTSELFFDDVFVPAENVLGGEEGKGFYQLMG 242

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +L     P E + I      A+ ++S +  +L E + + + R   G  + D    +  +A
Sbjct: 243 EL-----PQERLII------AMGAMSTIERALEETLAFTKERKAFGKTIWDFQNTQFTLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++     AA            E K     A  A++       W  ++   V+ + ++  G
Sbjct: 292 ELKARATAAKVFVNHCIAQHLEGKLDVPTACMAKL-------WLTELQGEVVDKCLQLHG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGYI +  IAR +R+S  + I  GS   M +
Sbjct: 345 GSGYINDYPIARMFRDSRVSRIFGGSNEIMKM 376


>gi|46136291|ref|XP_389837.1| hypothetical protein FG09661.1 [Gibberella zeae PH-1]
          Length = 412

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 21/280 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P   T+      L+E   G+D  A+ ++  + +DG        W  +S  +D FI+ A +
Sbjct: 141 PRLATNTVASFCLSEPVSGSDAFAMATRATETADGFKINGSKMWITNSKEADLFIVFANL 200

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
           +   G   +   L +    G    + + K+G R+++T  + F +       LLG+     
Sbjct: 201 DPSKGYKGISAFLVEKGMKGFSIAKKEKKLGIRASSTCVINFDDVEIPKENLLGE----R 256

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-EAIHYARR-----RHVSGGILIDQPVMKRAIA 360
           G      I I L+   + ++     LA  A   A R     R   G ++ +   M+  +A
Sbjct: 257 GQGYKYAISI-LNEGRIGIAAQMTGLALGAFDNAARYVWNDRKQFGSLVGEFQGMQHQLA 315

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +I AA AL +  A   +  +   ++AA A++       +  ++A  V   A+E +G
Sbjct: 316 QAYTEITAARALVYTAARKKEAGEDFVKDAAMAKL-------YASQVAGRVSGSAIEWMG 368

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G++ E    +++R+S   +I  G+ N  +  +  LL+K
Sbjct: 369 GMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIAKLLQK 408


>gi|311695369|gb|ADP98242.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 586

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 123/312 (39%), Gaps = 38/312 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   GTD+  I ++ +   DG + ++G K F++    D       ++LA++    +
Sbjct: 154 MDLTEPHAGTDLGIIRTKAEPNDDGSFNVTGTKIFITWGEHDMAENIIHLVLAKLPDAPK 213

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+ L  +DGS    N      L+ K+G + +AT  + F    G+L+G+ N
Sbjct: 214 GPKGISMFLVPKFLVNDDGSLGERNSFSCGSLEKKMGIKGSATCVMNFDGAKGWLVGEEN 273

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGG---------ILI 350
                +  M     L   I  +     SL  A  YA    + R  +G          IL+
Sbjct: 274 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYALDRIQSRAPTGAQQPEKAADPILV 333

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404
             P ++R +  +   +      S  +A   D AK       R        ++ P+ K + 
Sbjct: 334 -HPDVRRMLLTMKSYVEGGRTFSTYVAQWLDIAKFAEDDERRKHAEGMVALLTPVAKAFL 392

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                       +  GG G+I E    +  R+     I  G+     LD++     GT  
Sbjct: 393 TDRGLDTCIMGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGTQ- 451

Query: 465 FEQLFSTLEQDL 476
             +L+    QD+
Sbjct: 452 -GKLYELFAQDV 462


>gi|188027001|emb|CAQ53135.1| butyryl-CoA dehydrogenase [Clostridium saccharobutylicum]
          Length = 379

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
            GLTE   GTD A     GQ+ +  +    Y L+G K F+++  +++ FI+ A  +   G
Sbjct: 123 FGLTEPGAGTDAA-----GQQTTATLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQG 177

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +   + + S  G    +L+NK+G R+++T EL   N       LLG      G    
Sbjct: 178 TRGISAFVVEKSFPGFSVGKLENKMGIRASSTTELVMENCIVPKENLLGKEGKGFGIA-- 235

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK    LD   + ++   + +A     EA+ Y + R      L     ++  IA++ + I
Sbjct: 236 MKT---LDGGRIGIAAQALGIAEGAFEEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L ++ A      +  S +AA A++ A         +A  V  +A++  GG GY +
Sbjct: 293 DAAKHLVYKAACKKQAGQPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYPVERMMRDAKITEIYEGT 365


>gi|23500196|ref|NP_699636.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|23463798|gb|AAN33641.1| acyl-CoA dehydrogenase [Brucella suis 1330]
          Length = 375

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G     +++K+G  S+ T  L F+N    +   L       E  
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEG---EGY 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +  R A   +  K    EA+ A+++A        +MA  V + A++  GG GY+ 
Sbjct: 291 ETARQMVLRAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYLA 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           +  + R YR+     I  G+ +   L
Sbjct: 344 DYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|312139398|ref|YP_004006734.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325672719|ref|ZP_08152415.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311888737|emb|CBH48049.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325556596|gb|EGD26262.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 38/280 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  K  D  + L+G K F+++ + +D  I++A  +   G    
Sbjct: 124 IAMTEPGTGSDLQNIKTRAVKDGDH-WILNGAKTFITNGINADLVIVVACTDPDKGAQGF 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG ++  T EL F++               F +L+ +L  
Sbjct: 183 SLLVVERGMEGFERGRNLDKIGLKAQDTAELSFTDVRVPAENLLGEEGMGFIYLMQNL-- 240

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      A+++ + M   L   I Y R R   G  +      +  +A++A 
Sbjct: 241 ---PQERLSI------AVVAAAAMESCLDMTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A   L  +     +  K   +EAA A       K+W  +    +I   ++  GG GY
Sbjct: 292 ETTAVRVLVDKFIEQLNAGKLSVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + E  IA+ Y +S   +I  G+   M      ++ +G NL
Sbjct: 345 MREYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 380


>gi|167840719|ref|ZP_02467403.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 387

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE----GRVG 254
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S + +D + +  + +    G  G
Sbjct: 127 LAITEPGGGSDVAALRTSAMRDGD-RYVVNGEKVFITSGIRADYYTVAVRTDPGALGAKG 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             L+  L+EDG+P GL    LK K+G  ++ T  L F +       L+G        V  
Sbjct: 186 LSLL--LVEDGTP-GLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQ 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A
Sbjct: 242 NFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHKLVDMAMRIGATRA 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              + A   D    R+ E      M    K +  +        A++ +GG GY+      
Sbjct: 302 WLEQCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPE 358

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE   N I  G+   M
Sbjct: 359 RIYREVKVNMIGGGAEEIM 377


>gi|237509158|ref|ZP_04521873.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|235001363|gb|EEP50787.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        V     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFEDCRVPAANLIGPEGGGFALVMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E      M    K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|218196010|gb|EEC78437.1| hypothetical protein OsI_18277 [Oryza sativa Indica Group]
          Length = 357

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +K+ DG Y ++G+K W  + P +   ++ A+ +   G   +
Sbjct: 137 LAMSEPNSGSDVVSMKCKAEKV-DGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGI 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G P     Q+L +K+G R + T EL F N F      L      V  M   + 
Sbjct: 196 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLD 254

Query: 318 LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+  +++   +  M+V L  A+ Y R+R   G  + +   ++  +AD+   + ++ +  +
Sbjct: 255 LERLVLAAGPIGLMQVCLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVY 314

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +A   D  K   ++ A   + A        + A  V  +A++C+GG+
Sbjct: 315 SVARDCDNGKVDRKDCAGVILFAA-------ERATQVALQAIQCLGGT 355


>gi|76801952|ref|YP_326960.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
 gi|76557817|emb|CAI49401.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
          Length = 387

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 43/307 (14%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVH------KDWAPKIFSREYDPTNKAPMQKTS 195
           LM +LEAG     S+ S     +M     +      ++W PK+   E             
Sbjct: 77  LMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQGE------------- 123

Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----V 249
            A+G  GLTE   G++ +A+ +  +   DG Y L+G K W  +SP+SD  ++ A+     
Sbjct: 124 -AVGCFGLTEPEHGSNPSAMETHAEADGDG-YVLNGAKTWITNSPISDVAVVWARDRSAD 181

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +  V  FLV     +   +G+   ++ +K+  R++ T E+  ++ +     +L  ++   
Sbjct: 182 DTPVRGFLV-----ETDRDGVTTNKITDKLSLRASITGEIGLNDVYVPEENVLPGVSGMK 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP+  +    Y   A  +V   R +  EA  YA  R   GG +    + +  +A++A  I
Sbjct: 237 GPLSCLTQARY-GIAWGAVGAARDAFEEARQYATDRDQFGGPIGRFQLQQDKLAEMATQI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L++RLA   +    R +  +       ++K    +MA      A E +GG+G   
Sbjct: 296 TLAQLLAYRLAELKERGDMRPQHVS-------MSKRNNVRMARNQARIAREMLGGNGITT 348

Query: 427 ERSIARH 433
           + S  RH
Sbjct: 349 DYSPMRH 355


>gi|332559771|ref|ZP_08414093.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332277483|gb|EGJ22798.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 403

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K ++G Y L G K W  ++P++D F++ A+ E   G++  
Sbjct: 145 FGLTEPDAGSDPAGMKTVARKSAEG-YVLHGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +LE G   GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA +H AR+    R   G  L    + +  +A++  DIA  
Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A      A +  GG+G  EE  
Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367

Query: 430 IARH 433
           + RH
Sbjct: 368 VMRH 371


>gi|296444960|ref|ZP_06886922.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296257628|gb|EFH04693.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  ++ + +K  D  Y L+G K W  + P++D  I+ A+ E   G   +
Sbjct: 130 LAMSEPGAGSDVVNMSMRAEKRGD-RYILNGEKMWVTNGPIADVVIVYAKTEPAAGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G+   R  +K+G R + T EL  +       N  G     +NV    ++ 
Sbjct: 189 TAFIVEKRFKGVAAARKLDKLGMRGSDTCELFLTDCEVPEENVLGVAERGVNVLMSGLDY 248

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  MR  L   + Y   R   G  + +  +M+  +AD+   + AA A
Sbjct: 249 ERCVL----AGGPIGIMRACLDIVVPYVHDRKQFGQPIGEFQIMQAKLADMYTTLNAARA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA A + A        + A  +  EA++C+GG+GYI +    
Sbjct: 305 YVYAVAKACDRGRTTRKDAAGAILFA-------AEHATRMALEAIQCLGGNGYINDYPTG 357

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 358 RLLRDAKLYEIGAGT 372


>gi|239942583|ref|ZP_04694520.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239989044|ref|ZP_04709708.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291446045|ref|ZP_06585435.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291348992|gb|EFE75896.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 608

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  I  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  F+VP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356
            +   G  +  +I+ +  +     +++ +      A+ YA+ R V G  L   +D+   K
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399
             I    D+  +L    A A   R        + ++  E ++  E+A        ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K +  + +   +A++++  GGSGY++E  + ++ R++  +++  G+      D      
Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460

Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509
           + ++G +L     +TL +++     G+ G + +    DS++    D    +   +T+  A
Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAQGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515

Query: 510 LASSAAALYRAGMN 523
                  +Y+ G+N
Sbjct: 516 TGEDVKNIYKVGLN 529


>gi|163760525|ref|ZP_02167606.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
 gi|162282140|gb|EDQ32430.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
          Length = 404

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ +K SDG Y L G K W  ++P++D F++ A+ E   G  + 
Sbjct: 146 FGLTEPDAGSDPGGMKTRARK-SDGGYVLHGSKMWISNAPIADVFVVWAKSEAH-GGEIR 203

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+   N       LL +++   GP       
Sbjct: 204 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP------F 256

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   RH  G  L    + ++ +AD+  +IA   
Sbjct: 257 GCLNRARYGISWGVMGAAEDCWYRARQYGLDRHQFGKPLAGTQLYQKKLADMQTEIALGL 316

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE +       +A  M  I K   C  A  +   A +  GG+G   E  +
Sbjct: 317 QGSLRVGRLMDEHR-------FAPEMISIVKRNNCGKALDIARMARDMHGGNGIQAEYHV 369

Query: 431 ARH 433
            RH
Sbjct: 370 MRH 372


>gi|115372054|ref|ZP_01459366.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115371019|gb|EAU69942.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 539

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 51/391 (13%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI---RAARLYLMA-QLEAGHLMSPSVTSA 159
           H L+R+     +   +   S  P V  Q   +     A  YLMA  L A   +  ++ +A
Sbjct: 17  HPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYVGLTIGAA 76

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++    TP + + +  +++  E+  T             + LTE + G+ +  + ++  
Sbjct: 77  HLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLGDVKARAF 123

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS-- 266
              DG Y +SG K F+S    D       + LA++EG       +  F VP    +G   
Sbjct: 124 PAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSRRPEGDRL 183

Query: 267 -PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             N +    + +KIG R   ++ L +    +  G+L+G+ N     +  M     +   +
Sbjct: 184 VDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNEARIMVGL 243

Query: 323 MSVSGMRVSLAEAIHYARRR---HVSGGILIDQP--------------VMKRAIADIALD 365
             V+   V+  EA+ YAR R     +G     QP              + ++AI +  L 
Sbjct: 244 NGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKAIVEGGLS 303

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AAT++   LA    + ++R        ++ P+ K +  +        A++  GG GY 
Sbjct: 304 LLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQVHGGYGYS 363

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E       R+   NSI  G+     LD+L 
Sbjct: 364 SEYLPEAWLRDQKLNSIHEGTTGIQGLDLLG 394


>gi|111219571|ref|YP_710365.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147103|emb|CAJ58748.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 667

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 161/355 (45%), Gaps = 63/355 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S     P +   ++LA+ EG     
Sbjct: 215 LTEPDAGSDVGAGRTRAVEQPDGTWHIEGVKRFITSGDWDVPENIIHLVLARPEGHGPGT 274

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+ + D      G  NG+    ++ K+G + +AT EL F       G+L+GD
Sbjct: 275 KGLSMFVVPKFMPDPATGEPGERNGVYVTNIEKKMGLKVSATCELSFGERTPAVGWLVGD 334

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349
             V  G  +  +++ Y  +     +++ +      A+ +AR R V G  L          
Sbjct: 335 --VHEGIAQMFQVIEYARMMVGTKAIATLSSGYLNALDFARTR-VQGADLTRSTDKTAPR 391

Query: 350 ---IDQP------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAP 398
              I+ P      ++++A A+    +   TA +F+   +   A+  ++E A     ++ P
Sbjct: 392 VEIINHPDVRRMLMLQKAYAEGMRSLVLYTA-TFQDRVAQAAARGGNDELAVRINDLLLP 450

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K    + +  +++ +++  GGSGY+++  I ++ R++  +++  G+ +          
Sbjct: 451 IVKGVGSERSYELLSTSLQIFGGSGYLQDYPIEQYIRDAKIDTLYEGTTSI--------- 501

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            +G +LF   F  + +D    G+ +  +L +  +  K + G      E+  L ++
Sbjct: 502 -QGQDLF---FRKIVRD---RGQALTAVLGEIQTFVKAEAGNGALQYEREVLGAA 549


>gi|111019862|ref|YP_702834.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819392|gb|ABG94676.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 39/308 (12%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T    + + PK+ + E   T             + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLLSLYGTEEQKRQYLPKLATGEIRAT-------------MALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRLLEDG 265
            A+++  +   D +  +SG K ++S+      I L      A      G  +V  L+E G
Sbjct: 133 QAMSTNAKTDGDDL-VISGSKTWISNARRSGLIALLCKTDPAASPKHKGISIV--LVEHG 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDS 320
              GL   R   K+G +   T EL F N   +   +LG      G  + MK L    +  
Sbjct: 190 P--GLTVSRDLPKLGYKGVETCELSFDNYRISSDAVLGG-TAGKGFAQMMKGLETGRIQV 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +
Sbjct: 247 ACRALGVATAALEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQY 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P  
Sbjct: 307 DSGDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL- 358

Query: 441 SILLGSGN 448
            +++G G 
Sbjct: 359 -MIVGEGT 365


>gi|23100466|ref|NP_693933.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778699|dbj|BAC14967.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 32/258 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D +++ +  + I D +Y L+G K F+++   +D +I  A+  G     +   
Sbjct: 124 LTESGSGSDASSMKTTAKLIDD-MYVLNGSKVFITNGGEADTYITFART-GDSPKDISAF 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVSTGP 308
           ++E  +P G    + + K+G   + TVE+ F N              GF +   N++ G 
Sbjct: 182 IVEKDAP-GFIIGKKEKKMGLHGSNTVEIIFENCRIPKENLLGERGKGFKIAMANLNIGR 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +           A   +     +L  A+ YA+ R   G  +     +   +A++A ++ +
Sbjct: 241 I---------GIAAQGLGIAEAALNYAVTYAKEREQFGKPIAANQGISFKLAEMATNVES 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A   +  K   +EA+ A++MA  T      M  A+  EA++  GG GY +E 
Sbjct: 292 AKLLTYQAAALIEAGKQCGKEASMAKMMATKTA-----MNNAI--EAVQVFGGYGYTKEY 344

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 345 PVERLFRDAKVTEIYEGT 362


>gi|333007686|gb|EGK27163.1| protein aidB domain protein [Shigella flexneri VA-6]
          Length = 134

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 7/136 (5%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H  + ++F  NQP      N Y SD  L  A+           L  +G+ + +  + EL
Sbjct: 1   MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSNFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W    E   R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAW----EEDARSGAF 114

Query: 134 KIRAARLYLMAQLEAG 149
             RAAR  L  +L  G
Sbjct: 115 VARAARFMLHGRLRLG 130


>gi|239994076|ref|ZP_04714600.1| Acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 599

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 38/298 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252
           LTE   G+D+  +  + +   DG Y L+G K F+S+   D       I+LA++    EG 
Sbjct: 164 LTEAHCGSDLGMLKCRAEPQEDGTYSLTGTKIFISAGEHDLSENIVHIVLARLPDAPEGT 223

Query: 253 VGC--FLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   F+VP+  + EDG     N +    +++K+G +++AT  + F    G+L+G  N  
Sbjct: 224 KGISLFVVPKFNVSEDGEKQDRNAVGCGSIEHKMGIKASATCVINFDGAKGYLIGPPNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353
              +        + + +  ++    +   A+ YA+     R ++G    D P        
Sbjct: 284 LNCMFTFMNTARIGTGLEGLASSEAAFQGALRYAKDRIQFRSLTGRKNPDGPADPIIVHP 343

Query: 354 ------VMKRAIADIALDIAA--ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
                 + ++A A+    +AA     +   L  S DEA+ +  +A  A  + PI K +  
Sbjct: 344 DVRRMLLTQKAFAEGNRALAAYCMQLVDVTLYGS-DEAEKQLADAKLA-FLTPIVKAFLT 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + A    +  M+  GG G+I+E  + +  R++   ++  G+     +D+L     G+N
Sbjct: 402 ETAQEATSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAVDLLGRKVMGSN 459


>gi|56418980|ref|YP_146298.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56378822|dbj|BAD74730.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 398

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+A+I +   +  D  Y L+G K W   + ++D F++ A  +       +
Sbjct: 123 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R +      G   + +K K+G RS  T EL F N     +   N+     E  K
Sbjct: 182 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 233

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+   +V+   V L  A     + Y   R   G  +    ++++ IA +   + 
Sbjct: 234 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E
Sbjct: 294 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNE 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ R S A  I  G+
Sbjct: 347 YPVERYLRNSKAPVIYEGT 365


>gi|329960099|ref|ZP_08298563.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057]
 gi|328533051|gb|EGF59824.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057]
          Length = 567

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     ++  + L+G K F+++  ++  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D +  G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R   G  +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ +   D  K+              R E+  Y+++     P+ K    + A     
Sbjct: 347 SLLYQTSRYVDIYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|261415356|ref|YP_003249039.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371812|gb|ACX74557.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302325383|gb|ADL24584.1| acyl-CoA dehydrogenase family protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 570

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 24/287 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +     +D  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 172 MSMDLTEPDAGSDLQRVMLKATYSEADKCWYLNGVKRFITNGDSDIHLVLARSEEGTHDG 231

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L G      G ++ +  L
Sbjct: 232 RGLSMFIYDKRDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGRRKF--GLIKYVMAL 289

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   +++  EA+ YA+ R   G  +++ P +   I++I   + A  AL
Sbjct: 290 MNGARLGIAAQSVGISQMAYNEALAYAKDRKQFGQAIVNFPAVYEMISNIKARLDAGRAL 349

Query: 373 SFRLANSFDEAK--------------SRSEEAAYARIMA---PITKYWCCKMAPAVIAEA 415
            ++ A   D  K               + E   Y ++ +   P+ K    + A     + 
Sbjct: 350 LYQTARYVDIYKCLEDIERTRKLTDDEKKELKLYQKLASACTPLAKGMNSEYANQNSYDC 409

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           ++  GGSGY+ E +  R YR++   SI  G+     +  L  +  G+
Sbjct: 410 IQVHGGSGYMLEYACQRLYRDARITSIYEGTTQLQTVAALPHITTGS 456


>gi|126437250|ref|YP_001072941.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126237050|gb|ABO00451.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T++ ++  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTRAERDGDS-YVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ D    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LLVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  +  A   +  +
Sbjct: 243 RVGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHV 302

Query: 377 AN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                    +   E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 303 VERQLSGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 356 D--MRILGIGGGTTEILTAL 373


>gi|288959958|ref|YP_003450298.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288912266|dbj|BAI73754.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 390

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 131 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGTKMWITNGPDADTLVIYAKTDLAAGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F +     + + N+  G    + +L+  
Sbjct: 190 TAFLVEKGFKGFSVAQKLDKLGMRGSNTGELVFEDC---EVPEENILGGVGRGVNVLMSG 246

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     ++G  + + +A     I Y   R   G  + +  +M+  IAD+   + AA A 
Sbjct: 247 LDYERAVLAGGPLGIMQACMDVVIPYVHDRKQFGQPIGEFQLMQGKIADMYTVMNAAKAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A + +     W          EA++ +GG+GYI E    R
Sbjct: 307 VYTVAKACDRGETTRKDAAAAILYSAEKATWMA-------LEAIQTLGGNGYINEYPTGR 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 LLRDAKLYEIGAGT 373


>gi|86749241|ref|YP_485737.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86572269|gb|ABD06826.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++   + DG  Y L+G K F+S   ++   ++    G  G   +  
Sbjct: 125 LTEPGSGSDAAALRTRA--VIDGDHYVLNGQKQFISGAGANDLYVVMVRTGGDGPGGIST 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+ D    GL +   + K+G  +  T  + F N        LGD  +        KI + 
Sbjct: 183 LVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIG------FKIAMA 236

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+    S+ G + +L++A+ Y + R   G  L +   ++  +AD+A ++ AA  
Sbjct: 237 GLDGGRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAART 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R A + D       + A A  +  + K +       V  +A++  GG GY+ E  + 
Sbjct: 297 LLWRAAAALD------RKDADATKLCAMAKRFATDTGFNVANDALQMHGGYGYLAEYGVE 350

Query: 432 RHYRESPANSILLGSGNAMVLDV-LNLLEK 460
           +  R+   + IL G+   M L V   LLE+
Sbjct: 351 KIVRDLRVHQILEGTNEIMRLIVSRKLLEE 380


>gi|114562518|ref|YP_750031.1| butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
 gi|114333811|gb|ABI71193.1| Butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
          Length = 385

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  +  D  Y ++G K F+S       +++    G  G   +  +
Sbjct: 124 LTEPGAGSDAASLQTKAVRDGDD-YLITGSKMFISGAGETELLVVMCRTGEAGPKGISAI 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
                  G+ Y + ++K+G  +  T  + F N       LLG+     G    MK L   
Sbjct: 183 AVPADAAGVTYGKAEDKMGWNAQPTRLISFENVRVPAANLLGE--EGQGFTFAMKGLDGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  S+   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +  RL
Sbjct: 241 RINIATCSIGTAQAALTRATEYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +F       E +AY      + K +   +   V   A++  GG GYI E  + RH+R+
Sbjct: 300 A-AFKLDTQDPEASAYC----AMAKRFATDVGFQVCDGALQIHGGYGYIREYPLERHFRD 354

Query: 437 SPANSILLGSGNAMVL 452
              + IL G+   M L
Sbjct: 355 VRVHQILEGTNEIMRL 370


>gi|325123539|gb|ADY83062.1| putative acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 387

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 27/318 (8%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAI-GLGL 202
           L AG  M+ + +    ++LM    VH   AP I  F  E   +   P   +   I  L +
Sbjct: 74  LLAGVEMAKAGSGGVHISLM----VHTIGAPPIQHFGSEELKSKVLPRIISGEKISALAI 129

Query: 203 TEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259
           TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G   + 
Sbjct: 130 TEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGIS 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   + 
Sbjct: 188 MLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNME 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    
Sbjct: 247 RFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEET 306

Query: 377 ANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           A    + K +  E     +  + +A  T  +C          A++ +GG G++      R
Sbjct: 307 AWKMTQQKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKSER 359

Query: 433 HYRESPANSILLGSGNAM 450
            YRE   N I  G+   M
Sbjct: 360 IYREVKVNMIGGGAEEIM 377


>gi|312889455|ref|ZP_07749007.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311298007|gb|EFQ75124.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 596

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 127/294 (43%), Gaps = 56/294 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           LTE   G+D  +  ++ +  ++G  Y ++G K W  +   +D F++ A+++    +  F+
Sbjct: 150 LTEPNSGSDANSGRTKAKLNAEGTHYLITGQKMWITNGGFADVFVVFAKIDDDANLSAFI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V +        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 210 VEKAF-----GGISMNPEEHKLGIKGSSTRQVFFNDCPVPVENLLSERQNGFKIAVNILN 264

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
           +           I L +A +  S  R++L  A+ Y+  R     +    P+     ++  
Sbjct: 265 IGR---------IKLGAAAIGSS--RMALNYAVKYSNER-----VQFKLPISKFGAIRYK 308

Query: 359 IADIALDIAAATALSFRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCK 406
           IA++A  I A  + ++R   + D+A            K++ +      +   I K W  +
Sbjct: 309 IAEMATRIYAVESAAYRAGQNIDDAYEALHASGMDLAKAKLKSTEQFAVECAILKVWGSE 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           M   V+ E ++  GG GY  E  + R YR+S  N I  G+     + ++++L K
Sbjct: 369 MLDYVVDEGLQVYGGMGYSAEAPMERAYRDSRINRIFEGTNEINRMLIVDMLLK 422


>gi|262371050|ref|ZP_06064372.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262313936|gb|EEY94981.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 593

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 49/317 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K 
Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L +     G  N      +++
Sbjct: 197 FITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSVGERNAAGPGSIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A  
Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316

Query: 338 YA----RRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YA    + R  SG          IL+   V +R + +   +  A+ A +  +    D  K
Sbjct: 317 YATDRLQGRSASGVQSPAKPADSILVHGDV-RRMLLNARANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSE----EAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++    +AA  R+  + PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDPEAVKAANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435

Query: 439 ANSILLGSGNAMVLDVL 455
              I  G+      D++
Sbjct: 436 IAQIYEGTNGVQSQDLI 452


>gi|255037301|ref|YP_003087922.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254950057|gb|ACT94757.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 604

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 44/290 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           LTE   G+D  +  ++ +   DG  Y + G K W  +   +D FI+ A++E  G+    L
Sbjct: 153 LTEPDSGSDANSGKTKARLSGDGTHYVIDGQKMWITNGGFADVFIVFAKIEENGQTDKNL 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
              ++E  S  G+     ++K+G + + T +L F+        D  V   PVE+M     
Sbjct: 213 TAFIIEK-SFGGITMNEPEHKMGIKGSDTRQLFFN--------DCRV---PVENMLSERG 260

Query: 313 ---KILIYL-------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              KI + +        +A       RV+ ++AI YA  R   G  + +   +K  +A++
Sbjct: 261 NGFKIAVNILNIGRIKLAAAALGGAKRVA-SQAIQYANERKQFGTAIANFGAIKHKLAEM 319

Query: 363 ALDIAAATALSFRLANSFDEA----KSRSEEAAYARIMA--------PITKYWCCKMAPA 410
           A+ + A  + ++R+  + D+     K +    A A++ A         I K    ++   
Sbjct: 320 AVQMFATESAAYRVGQNIDDLIQAFKEKGMNDAEAKLKALEEFAIECAIMKVHGSEVLDF 379

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V+ E ++  GG G+  +  + R YR+S  N I  G+     L V+++L K
Sbjct: 380 VVDEGVQVYGGMGFSADAPMDRAYRDSRINRIFEGTNEINRLLVVDMLLK 429


>gi|209551947|ref|YP_002283863.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539540|gb|ACI59471.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 381

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 126/262 (48%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA++++ +++++G + L+G K F+S    SD ++++A+  G  G    P+
Sbjct: 124 LTEPGAGSDAAALSTKAERVTNG-WRLNGAKAFISGGGYSDIYVVMART-GEAG----PK 177

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
                ++E G+P GL +  L+ K+G ++  T +++F +    FG L+G+     + +   
Sbjct: 178 GISAFVVEKGTP-GLSFGALEKKMGWKAQPTAQVQFDDCIVPFGNLIGEEGRGFSYAMAG 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++ I    A  ++ G + +  +++ Y   R   G  L     ++  +AD+   + +
Sbjct: 237 LDGGRLNI----AASALGGAQTAFEQSLRYMGERKAFGQTLDRLQALQFRVADMETKLQS 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L  + A   D+A      A  A     + K      A  V  + ++  GG GY+ + 
Sbjct: 293 SRVLLRQAAWKLDQA------APDATKFCALAKLHVTDAAFDVANQCLQIHGGYGYLADY 346

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I +  R+   + IL G+   M
Sbjct: 347 GIEKLVRDLRVHQILEGTNEIM 368


>gi|159044900|ref|YP_001533694.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
 gi|157912660|gb|ABV94093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
          Length = 406

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K   G Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAEKTPTG-YRLTGSKMWISNSPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +L+ G+P GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 207 F----VLDKGTP-GLSAPKVGGKLSLRASVTGEIVMD---GVEVGEDALLPG-VEGLKGP 257

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +    +  +E     A  Y   RH     L    + ++ +AD+  +IA  
Sbjct: 258 FGCLNRARYGIGWGVMGASEFCWHAARQYGLDRHQFKRPLAQTQLFQKKLADMQTEIALG 317

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R+    DE ++  E       M  + K   C  A  +   A +  GG+G  EE  
Sbjct: 318 LQAALRVGRLMDEGRAAPE-------MISLLKRNNCGKALEIARAARDMHGGNGISEEFQ 370

Query: 430 IARH 433
           + RH
Sbjct: 371 VMRH 374


>gi|291230666|ref|XP_002735282.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight
           chain-like [Saccoglossus kowalevskii]
          Length = 422

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 33/262 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------EG 251
           G+TE  GG+D+A I ++ +K  D  Y ++G K W  +S  ++ + +LA+          G
Sbjct: 157 GVTEPGGGSDVAGIRTRAEKKGDH-YVINGQKMWITNSGYANWYFVLARTSTDPKQPASG 215

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNV 304
               F+V R     +P GL   R +  +G RS+ T  + F +        LLG+     +
Sbjct: 216 AFTGFIVDR----DTP-GLTPGRKEWNMGQRSSDTRGITFEDVVVPKENVLLGEGAGFKI 270

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G  +  +  +    A  +V   R +L EA  Y+  R   G ++ +   +   +A++A+
Sbjct: 271 AMGAFDKTRPPV----AAGAVGLARRALDEATKYSLERRTMGKLIAEHQAVAFMLAEMAI 326

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I ++ ++ +R A   DE +  +  A+ A+ +A      C         +A++  GG G+
Sbjct: 327 GIESSRSMVYRAALQTDEGERNTYYASIAKALAADVANKCA-------TDAVQIFGGYGF 379

Query: 425 IEERSIARHYRESPANSILLGS 446
             +  + +  R++    I  G+
Sbjct: 380 NSDYPVEKLMRDAKIFQIYEGT 401


>gi|162449436|ref|YP_001611803.1| acyl-coenzyme A dehydrogenase, short/branched chain [Sorangium
           cellulosum 'So ce 56']
 gi|161160018|emb|CAN91323.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Sorangium
           cellulosum 'So ce 56']
          Length = 388

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 28/274 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ ++  D  + L+G K W  ++  S  F++ A V+   G   +  
Sbjct: 128 LSEAGSGSDAFALAARAERRGD-RWILNGRKLWITNANESSVFLVFANVDPTKGYKGITA 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKIL 315
            + + S  G    + +NK+G R+++T EL        +L D  V  G V     +  KI 
Sbjct: 187 FVVERSFPGFSVGKKENKLGIRASSTCEL--------VLEDCEVPEGNVIGEVGKGYKIA 238

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + +    + LA      A+ Y   R   G  +     ++   A +A++I AA
Sbjct: 239 IETLNEGRIGIGAQMLGLAAGAFDHAMRYMGERKQFGQSIASFQGVQFQYARVAMEIEAA 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A   D  +   +EAA A++ A        ++A    +  +E +GG G+ ++  
Sbjct: 299 RLLVYNAARLKDAGQPFVKEAAMAKLFA-------SEVAERTASLCIEFMGGVGFTKDYP 351

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + + YR++    I  G+ N  +  +  LL+ G +
Sbjct: 352 VEKLYRDAKIGKIYEGTSNMQLSTIAKLLQAGYD 385


>gi|111224259|ref|YP_715053.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111151791|emb|CAJ63511.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 380

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 40/301 (13%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI 225
           +H D      SR  D   KA   P   +  AI  + +TE   G+D+  I +Q  +  D  
Sbjct: 90  LHNDVVGSYLSRLPDDEQKARWLPGFASGEAIWAIAMTEPGAGSDLQGIRTQAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + +SG K F+++ + SD  I++A+ +   G   +  L+ +    G    R  +KIG  + 
Sbjct: 149 WLVSGAKTFITNGIHSDYVIVVARTDPAAGSRGISLLVVERDMPGFSRGRNLDKIGLHAQ 208

Query: 285 ATVELEFS-------NTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            T EL F        N  G L G     +   P E + I      AI +V+G R      
Sbjct: 209 DTAELFFDAVRVPARNVLGRLGGGFVHLMENLPEERLSI------AISAVAGARAVFDST 262

Query: 336 IHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFR-LANSFDEAKSRSEE 389
           + Y + R   G     QP+      +  +A++A +I  A     R L  SF+E  +    
Sbjct: 263 LEYTKTRTAFG-----QPIGGFQHSRFLLAELATEIDIAQVYIDRCLKASFEEKLTT--- 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                + A   K+W  ++   V+   ++  GG GY+ E  +A+ + ++   +I  G+   
Sbjct: 315 -----VDASKAKWWATELQQKVVDRCLQLHGGYGYMTEYPVAKAFTDARIQTIYGGTTEI 369

Query: 450 M 450
           M
Sbjct: 370 M 370


>gi|108801269|ref|YP_641466.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870420|ref|YP_940372.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771688|gb|ABG10410.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696509|gb|ABL93582.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 382

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T++ ++  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTRAERDGDS-YVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ D    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LLVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  +  A   +  +
Sbjct: 243 RVGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHV 302

Query: 377 AN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                    +   E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 303 VERQLSGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 356 D--MRILGIGGGTTEILTAL 373


>gi|86139222|ref|ZP_01057792.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824066|gb|EAQ44271.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 380

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 23/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           LG+TE  GG+D+A + +  ++  DG  + L+G K F++  M SD F++ A+  G+ G   
Sbjct: 125 LGVTEPGGGSDVANLKTTARR--DGNHWVLNGSKTFITGGMTSDYFVIPARTGGQ-GLDG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIG--NRSNATVEL-EFSNTFGFLLGDLNVSTGPVEDMKI 314
           +     +    G     L  K+G      AT+ L E       ++GD    TG +  M  
Sbjct: 182 ISLFFVEADTAGFSRSALTRKMGWWCSDQATLFLDEVRVPASNMMGD--EGTGFLAIMNN 239

Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                I L + ++ +  M+  L ++I +A+ R   G  LI   V++  IAD++  I A  
Sbjct: 240 FNMERINLIAGVLGM--MKTCLEDSIAWAQERETFGKKLIRHQVIRHKIADMSARIDAVE 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A    +    ++      E + A+  A     +C        +EAM+ +GG+GY+    +
Sbjct: 298 ATLRMICWQVNQGDMPVAELSKAKFFATKACEFCA-------SEAMQILGGAGYLRGNRV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE    +I  GS   M
Sbjct: 351 ERIYREVKVMAIGGGSEEIM 370


>gi|319953442|ref|YP_004164709.1| glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319422102|gb|ADV49211.1| Glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + + ++ + + D  Y L+G K W  +SP +D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPNHGSNPSGMETKYKDMGDH-YLLNGAKLWISNSPFADIAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F N     +   N+  G       L  
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNV---KVPKENILLGKTGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  +
Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLM 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RL    +E K+ + + + A       K    +MA  +  EA + +G  G   E SI R
Sbjct: 307 ALRLGQLKNEGKATTAQISMA-------KRNNVEMALKIAREARQVLGAMGISGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|215402541|ref|ZP_03414722.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
 gi|289744476|ref|ZP_06503854.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
 gi|289685004|gb|EFD52492.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
          Length = 390

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 62/320 (19%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+    T    KDW P++ +               V     LTE   G+D  A++++ 
Sbjct: 93  AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139

Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNG 269
            +   G    Y L G K F+S +  SD ++++A+  G  G    PR     ++E G+P G
Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAAG----PRGVSAFIVEKGTP-G 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDM 312
           L +   + K+G  +  T ++                      FG  +  LN         
Sbjct: 194 LSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR------ 247

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L
Sbjct: 248 -----LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRML 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +
Sbjct: 303 LWRAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEK 356

Query: 433 HYRESPANSILLGSGNAMVL 452
             R+   + IL G+   M L
Sbjct: 357 IVRDLRVHRILEGTNEIMRL 376


>gi|182437578|ref|YP_001825297.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466094|dbj|BAG20614.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 608

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  I  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  F+VP+   D      G  NG+    +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356
            +   G  +  +I+ +  +     +++ +      A+ YA+ R V G  L   +D+   K
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKER-VQGPDLANFMDKTAPK 340

Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399
             I    D+  +L    A A   R        + ++  E ++  E+A        ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456
            K +  + +   +A++++  GGSGY++E  + ++ R++  +++  G+      D      
Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460

Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509
           + ++G +L     +TL +++     G+ G + +    DS++    D    +   +T+  A
Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515

Query: 510 LASSAAALYRAGMN 523
                  +Y+ G+N
Sbjct: 516 TGEDVKNIYKVGLN 529


>gi|163738787|ref|ZP_02146201.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|163741502|ref|ZP_02148893.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161385236|gb|EDQ09614.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161388115|gb|EDQ12470.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +    G    +  +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEFKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       + E + Y + R   G  + +  +M+  IAD+   +  A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYMKERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426
           A  + +A + D+     ++AA            CC  A  V      +A++  GG+GY+ 
Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370


>gi|157962618|ref|YP_001502652.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157847618|gb|ABV88117.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 140/308 (45%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   T   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F +     + + N+  G    +K+L+  LD   +
Sbjct: 195 RGYKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA +  + +A 
Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSYIYNVAK 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R++ 
Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 365 LYEIGAGT 372


>gi|331268674|ref|YP_004395166.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329125224|gb|AEB75169.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 381

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A+  +  +   D  Y L+G K F+++   +D  I+ A  +   G   +
Sbjct: 123 FALTEPNAGTDAASQQTIAKCRGD-YYILNGSKCFITNGAKADFGIVFAMTDRSKGVKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G    + +NK+G R   T EL F        N  G      N++   ++ 
Sbjct: 182 SAFIVEKGFQGFTIGKHENKMGVRGTNTTELIFKDVKVPKENLLGKEGKGFNIAMATLDG 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I +    A  ++   + +L E + Y ++R   G  L     ++  ++++A  I AA  
Sbjct: 242 GRIGV----ASQALGIAQGALDETVKYIKQRKQFGKPLSSFQGLQWTVSEMATRINAARW 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  ++    ++EAA A++       +  + A  V+  A++  GG GYI++  + 
Sbjct: 298 LIYDAADKKNKGLPYTKEAAMAKL-------YATRTAVYVVDRAVQLHGGYGYIKDYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R YR++    I  G+
Sbjct: 351 RMYRDAKITEIYEGT 365


>gi|302543888|ref|ZP_07296230.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461506|gb|EFL24599.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 608

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 172/372 (46%), Gaps = 56/372 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    +SD  I  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRAKAVQQEDGTWHIEGVKRFITSGEHDVSDNIIHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD 301
             +  F+VP+   D      G  NG+    +++K+G R + T EL F   +   G+LLG+
Sbjct: 224 KGLSLFVVPKYDFDWDSGELGERNGVYATNVEHKMGLRVSNTCELTFGADTPAKGWLLGE 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
            +   G  +  KI+ +  +     +++ +      A+ YA+ R V G             
Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALEYAKER-VQGPDLAAFTDKSAPR 340

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEA-AYARI---MAPI 399
             +   P ++R++           AL    A+  DE    ++  E+A A +R+   + PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGLRALVLYTASVQDEIMVQEAAGEDASANSRLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------ 453
            K +  + A   +A++++ IGGSGY++E  + ++ R++  +++  G+      D      
Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGL-ARFLTEKIALA 511
           V +  +  T L E++   L +   ++G + +   RD ++    D +G+    LT+  A  
Sbjct: 461 VRDQGQALTVLSEEIKKFLAE---AAGGEELAPARDRLAQAAVDLEGIVGAMLTDLSATE 517

Query: 512 SSAAALYRAGMN 523
              +++Y+ G+N
Sbjct: 518 QDVSSIYKVGLN 529


>gi|254974604|ref|ZP_05271076.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-66c26]
 gi|255091996|ref|ZP_05321474.1| butyryl-CoA dehydrogenase [Clostridium difficile CIP 107932]
 gi|255313730|ref|ZP_05355313.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-76w55]
 gi|255516412|ref|ZP_05384088.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-97b34]
 gi|255649510|ref|ZP_05396412.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-37x79]
 gi|260682678|ref|YP_003213963.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260686276|ref|YP_003217409.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519641|ref|ZP_07405988.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-32g58]
 gi|260208841|emb|CBA61771.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260212292|emb|CBE03052.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291]
          Length = 378

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A   Q   + DG  Y L+G K F+++ ++ D ++++A  +   G   
Sbjct: 122 FGLTEPNAGTD--ASGQQTTAVLDGDEYILNGSKIFITNAIAGDIYVVMAMTDKSKGNKG 179

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   ++E G+P G  +   + K+G R +AT EL F +     +   N+     +  KI +
Sbjct: 180 ISAFIVEKGTP-GFSFGVKEKKMGIRGSATSELIFEDC---RIPKENLLGKEGQGFKIAM 235

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + LA     E + Y + R   G  L      +  +AD+ + + AA 
Sbjct: 236 STLDGGRIGIAAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAAR 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A + D  K    EAA A++ A  T       A  V  +A++  GG GY  +  +
Sbjct: 296 HLVYQAAINKDLGKPYGVEAAMAKLFAAET-------AMEVTTKAVQLHGGYGYTRDYPV 348

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 349 ERMMRDAKITEIYEGT 364


>gi|120555716|ref|YP_960067.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325565|gb|ABM19880.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 38/276 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTAKKDGDD-YVINGSKMWITNSPKADFMCLLANTSDDKPHKNK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------ST 306
              +VP      +  G+ +    NK+G RS+ T ++         L D+ +       + 
Sbjct: 182 TLMIVPM-----NTPGITFSPHLNKLGMRSSETAQV--------FLDDVRIPQRNRIGAE 228

Query: 307 GPVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           G    M++L + +     A   +  +   + + I Y R R   G  LID   +   +A++
Sbjct: 229 GTGFMMQMLQFQEERMWGAANVIKALENCVTQTIEYCRERKTFGQPLIDNQYIHFRLAEL 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I A  AL+++      E K  ++ A+ A++ A        ++   V    ++  GG+
Sbjct: 289 QTEIEALRALTYQACELHIEGKDVTKLASMAKLKAG-------RLGREVTDACLQFWGGN 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY+ +  ++R YR+    SI  G+   M+  +  L+
Sbjct: 342 GYMWDNPLSRAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|302518188|ref|ZP_07270530.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302427083|gb|EFK98898.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+T++  +  D  + L+G K F+++   +D  ++ A+     G      
Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           FLVP     G+P G   + L  K+G R  AT EL           LLG      +V+   
Sbjct: 184 FLVP----TGTP-GFARRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   ++ +    A   V   + +L  A+ +A+ R   G  +    +++  +ADIALD+ A
Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R+A+  D  +  +  A+ A++ A        + A      A++  GG GYI+E 
Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++   ++  G+
Sbjct: 348 PVGKLLRDARVMTLYEGT 365


>gi|254294859|ref|YP_003060882.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043390|gb|ACT60185.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +SP++D F++  +++G +  F  
Sbjct: 137 FGLTEPNHGSDPNSMETRAKKV-DGGYELNGTKMWITNSPIADVFVVWGKLDGVIRGF-- 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G  +GL    +K K+  R++ T E+   + F     LL +    +GP   +   
Sbjct: 194 --VLEKGM-DGLSAPEIKGKLALRASITGEIVMDSVFVPEDNLLPNAKGLSGPFGCLNKA 250

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  ++       + A  Y   R   G  L    ++++ +AD+  +I+   A   +
Sbjct: 251 RY-GIAWGALGAATACWSTAREYTIDRQQFGRPLAANQLIQKKLADMQTEISIGQAACLQ 309

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +    DE K      +       + K      A A+  E  + +GG+G  +E  + RH
Sbjct: 310 IGRLLDEKKCPPTAIS-------LIKRNSAGKALAIARECRDMLGGNGISDEFHVMRH 360


>gi|126513532|gb|ABO15870.1| acyl-CoA dehydrogenase [Streptomyces vitaminophilus]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 34/290 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P   S +             +   + +TE   G+D+A IT+  ++  D +Y
Sbjct: 104 TPEQKQRWLPGFASGD-------------LMTAIAMTEPGTGSDLAGITTTARRDGD-VY 149

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            L+G K F++   ++D  +++ +       + R G  ++  ++E  SP G    R   KI
Sbjct: 150 VLNGSKTFITGGALADLVLVVCRTAPRQDGDRRAGLSIL--VVEATSP-GFSVGRKLEKI 206

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R+  T EL F         LLG+   + G +    +   L   I +V+    ++   +
Sbjct: 207 GLRTQDTAELFFDEVRVPAANLLGEEGEAFGYLSHNLVQERLAIVIGAVTAAAAAVEMTV 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R+R V G  L      K  +A+ A ++ A   L        D A    E    +   
Sbjct: 267 EYVRQREVFGKPLSSFQNTKFVLAECAAEVEAGQVL-------MDRAIEEHERGELSHAD 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               K +C +M   VI + ++  GG GY+ E  IAR Y ++  + +  G+
Sbjct: 320 VAKAKLFCTEMEGRVIDKCLQLHGGYGYMLEYPIARLYADARVHRVYGGT 369


>gi|313228507|emb|CBY23659.1| unnamed protein product [Oikopleura dioica]
          Length = 421

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 20/288 (6%)

Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP I  F  E       P   T   I  +G+TE  GG+D+ A+ +   +  D  + L+G 
Sbjct: 130 APYITSFGTEEQKHKYIPSMTTGETISCIGMTEPSGGSDLQAMKTNAVRDGDD-WILNGS 188

Query: 232 KWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           K F+S+       ++A   + EGR    +   L++    NG    +   KIG  S  T E
Sbjct: 189 KTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTREHNGFNKGKNLRKIGQHSYDTAE 248

Query: 289 LEFSNT---FGFLLGD---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           L F +       LLG+   LN     + +      +  A+ +++ +  +  +   Y + R
Sbjct: 249 LFFDDVRLPASALLGEEEGLNKGFYMMMNELPRERVGCALEALARLENAFEQTRQYTQER 308

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              GG L D+ V+K ++A+I  +I +   ++      +   +  +E A+  ++ A   KY
Sbjct: 309 KAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLYSRGELDNETASMFKLYA-TEKY 367

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             C      + + ++  GG GY+ E  IA+ Y  +   +I  G+   M
Sbjct: 368 VSC------VNKLLQHWGGWGYMWEYDIAKEYAGARVFTIYAGTSEIM 409


>gi|312141503|ref|YP_004008839.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677282|ref|ZP_08156948.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890842|emb|CBH50161.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551979|gb|EGD21675.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 29/294 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W P + S E             V  G  LTE   G+DIA++ +  ++  DG +
Sbjct: 105 TEEQKKRWLPGLASGE-------------VLAGFALTEPDAGSDIASMRTVARREDDG-W 150

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            LSG K F+S+   +D  ++ A+ +   G      F VP+    G+P G+ Y   ++K+G
Sbjct: 151 HLSGSKTFISNAREADLVVLFAKTDPSAGFRGITAFAVPK----GTP-GISYSEPQDKMG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            RS  T  +   +    L  D  + T        L  L+ A + V+ M   +A       
Sbjct: 206 IRSAPTYTVYLDDVV--LPHDAVIGTEGRGGNIALTALNRARIDVAAMANGIALRAWELG 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R + S       P+ +     + L    A  ++ R+  + D A    +     R  A I+
Sbjct: 264 REYASERKQFGHPIFEFQAIQLLLGECDAKLVASRV--TADWASDVKDAGQDLRRAASIS 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           KY   +   +++ + ++  GG+G++ E  I R YR+     I  G+    +L +
Sbjct: 322 KYVATEACFSIVDQVVQIHGGAGFMRESEIERLYRDCRILRIFEGTSQIQLLTI 375


>gi|126667234|ref|ZP_01738208.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628390|gb|EAZ99013.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 31/275 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVG 254
           LTE   G+D A++ ++ ++  D  Y ++G K F+S +  +D  I++A+          + 
Sbjct: 124 LTEPGAGSDAASLRTKAERDGDD-YVINGSKVFISGAGATDVLILMARTGSPDSGAKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK 313
            FL+P        +G+ Y + + K+G  S  T  +   N    +   L     G    MK
Sbjct: 183 AFLIP-----ADADGVSYGKNEKKMGWHSQPTRSVTLENVRVPVTNRLGAEGEGFAIAMK 237

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+ G + +L  A  Y   R   G  L     ++  +AD+A ++ AA  
Sbjct: 238 GLDGGRLNIATCSLGGAQAALLRARDYMHARAQFGKPLAAFQALQFKLADMATNLVAARQ 297

Query: 372 L----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +    +F+L N   EA           +   + K +   +   V+ +A++  GG GYI E
Sbjct: 298 MVRLGAFKLDNGDPEAT----------LHCAMAKRFATDVCFDVVNDALQLHGGYGYIRE 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461
             + R+ R+   + IL G+   M L V   +LE+G
Sbjct: 348 YPLERYLRDLRVHQILEGTNEVMRLIVARRILEQG 382


>gi|328885620|emb|CCA58859.1| Branched-chain acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++  D  Y L+G K F+S +  SD +I+LA+  G     +   
Sbjct: 126 LTEPGAGSDAAALRTRAERDGDH-YVLTGVKQFISGAGTSDVYIVLARTGGGGPGGISAF 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
           ++E G P G+ +   + K+G  +  T ++        +  D  +     E  +I ++   
Sbjct: 185 VVERGDP-GVSFGANERKMGWNAQPTRQVVLDGVR--IPADRRLGA-EGEGFRIAMHGLN 240

Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  S+ G + +L  ++ +   R   G  L+D   ++  +AD+A ++ AA AL  
Sbjct: 241 GGRLGIAACSLGGAQSALDRSLTHLADREAFGAPLLDAQALQFRLADMATELTAARALVR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++ D    R + AA    +  + K +      +V   A++  GG GY+ E  I +  
Sbjct: 301 QAADALD----RGDPAAVQ--LCAMAKRFATDTGFSVADRALQLHGGYGYLSEYGIEKIV 354

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 355 RDLRVHRILEGTNEIM 370


>gi|85712837|ref|ZP_01043879.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
 gi|85693301|gb|EAQ31257.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
          Length = 593

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +   D  Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGIIKTKAEPQGDDSYLISGTKIFITGGEHDLVDNIVHLVLAKLPDAPAGT 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L  +DGS    N +    +++K+G   +AT  + F    G+++G+ N  
Sbjct: 226 KGISLFVVPKFLVNDDGSVGERNAVSCGSIEHKMGIHGSATCVMNFDGARGWMVGEPNRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQP 353
              +  M     L   I  +     S   A+ YAR R    G             L+   
Sbjct: 286 LAAMFTMMNYERLGVGIQGLGTAERSYQNALEYARERIQGRGAKATRDMSAAADPLLVHG 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEA-----AYARIMAPITKYWCCKM 407
            ++R +  +        A S  +    D AK   S+E      A   ++ P+ K +    
Sbjct: 346 DIRRMLLTMKSLTEGGRAFSTWVGQQLDRAKYGESDEVKQQADAMVALLTPVAKAFLTDT 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG GY+ E    +  R++    I  G+     LD+L 
Sbjct: 406 GLESTIHGQQIFGGHGYVREWGQEQLIRDTRIAQIYEGTNGIQALDLLG 454


>gi|47569767|ref|ZP_00240439.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|47553563|gb|EAL11942.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
          Length = 376

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|262371685|ref|ZP_06064964.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311710|gb|EEY92795.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 600

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPQADGSYAISGEKIFISAGEHDMAENIVHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFHVNADGSVGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRLAMRALSGPKALEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL + L+   D  E  +  E+  ++     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLSLHADIVEQGATEEDRKFSDNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|149377503|ref|ZP_01895244.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358195|gb|EDM46676.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 596

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 36/292 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   GTD+  I ++ +   DG + ++G K F++    D       ++LA++    +
Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNGDGSFSVTGTKIFITWGEHDMAENIIHLVLAKLPDAPK 223

Query: 251 GRVGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+  + EDGS    N L    L+ K+G + +AT  + F    G+L+G+ N
Sbjct: 224 GPKGISLFLVPKFDVNEDGSLGERNSLSCGSLEKKMGIKGSATCVMNFDGAKGWLVGEEN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350
                +  M     L   I  +     SL  A  YA  R               +  IL+
Sbjct: 284 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYALERIQSRAPTGAQQPEKAADPILV 343

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404
             P ++R +  +   +    A S  +A   D AK       R        ++ P+ K + 
Sbjct: 344 -HPDVRRMLLTMKGYVEGGRAFSTYVAQWLDIAKYSDDDERRKHAEGMVALLTPVAKAFL 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                       +  GG G+I E    +  R+     I  G+     LD++ 
Sbjct: 403 TDRGLDACIMGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMG 454


>gi|41393139|ref|NP_958899.1| isovaleryl-CoA dehydrogenase, mitochondrial [Danio rerio]
 gi|28279589|gb|AAH45426.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio]
 gi|182891438|gb|AAI64520.1| Ivd protein [Danio rerio]
          Length = 418

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257
           L ++E   G+D+ ++    +K  D  Y L+G+K W  +   +D  I+ A+ +   V   +
Sbjct: 159 LAMSESNSGSDVVSMKLTAKKQGDH-YVLNGNKFWITNGSDADVLIVYAKTDPEAVARGI 217

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E G P     Q+L +K+G R ++T EL F +       +LG LN     +     
Sbjct: 218 TAFIVEKGMPGFSSAQKL-DKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLD 276

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L  A   V  M+  L  AI Y   R   G  +    +M+  +AD+   +++     +
Sbjct: 277 LERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 336

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + D+    +++ A   +       +C + A  V  + ++C+GG+GYI +  + R  
Sbjct: 337 NVARACDKGHFSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPMGRFL 389

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 390 RDAKLYEIGAGT 401


>gi|209886037|ref|YP_002289894.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5]
 gi|209874233|gb|ACI94029.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5]
          Length = 401

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D+  + ++ +K+SDG Y L+G K W  ++P++D F++ A+ +    +V  
Sbjct: 143 FGLTEPDAGSDVDGMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVVWAKSQAHDNKVRG 201

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 202 FILEKGMK-----GLSAPKIAGKLSLRASITGEVVMDGVVVPESALLPNVSGLAGP---- 252

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE   H AR+    R   G  L    ++++ +AD+  +IA
Sbjct: 253 --FGCLNRARYGISWGAMGAAEDCFHRARQYVLDRKQFGRPLAATQLVQKKLADMEAEIA 310

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 311 LGLQGSLRIGRLMDEGKVTPE-------MVSIMKRNNCGKALDIARVARDMHGGNGISSE 363

Query: 428 RSIARH 433
             + RH
Sbjct: 364 FHVMRH 369


>gi|94497395|ref|ZP_01303966.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94423258|gb|EAT08288.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 381

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D AA+ +Q  +  D  Y ++G K F+S    +   ++    G  G     C 
Sbjct: 125 LTEAGSGSDAAALKTQAVRDGDH-YVVTGSKQFISGGGENELYVVMVRTGEDGPKGISCL 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           ++ + +E     G+ +   + K+G  S  T ++ F    G  +   N+     E  +I +
Sbjct: 184 VIEKDME-----GVSFGAPERKLGWHSQPTAQVNFD---GVRVPVDNLVGAEGEGFRIAM 235

Query: 316 IYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + LD   +     S+ G +  + EA+ Y + R   G  + D    +  +AD+  ++ AA 
Sbjct: 236 MGLDGGRLNIGACSLGGAQRCIDEAVRYTKDRKQFGQAIADFQNTQFMLADMLTELEAAR 295

Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L +  A    E A  ++  AA A+ +A  T         +V+  A++  GG GY+ +  
Sbjct: 296 TLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVDRALQLHGGYGYLMDYP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461
           + R +R+   +SIL G+   M + V  ++L +G
Sbjct: 349 VERFWRDLRVHSILEGTNQVMRMIVARDMLRQG 381


>gi|90419436|ref|ZP_01227346.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336373|gb|EAS50114.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D   +T++ +KI DG Y LSG K W  +SP++D F++ A
Sbjct: 138 PRLATGEYVGCFGLTEPDAGSDPGGMTTRAEKI-DGGYRLSGAKMWISNSPIADVFVVWA 196

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +    + ++  F++     D    GL   +++ K+  R++ T E+           LL +
Sbjct: 197 KSAAHDNKIRGFIL-----DKGMKGLSAPKIEGKLSLRASITGEIVMDGVEVGEDALLPN 251

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           ++   GP         L+ A   +S   +  AE     A  Y   R   G  L    +++
Sbjct: 252 VSGLGGP------FGCLNRARYGISWGAMGAAEDCWKRARDYTMERTQFGRPLAQTQLVQ 305

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +IA     S R+   FD       E A A  M  + K   C  A  +   A 
Sbjct: 306 KKLADMQTEIALGLQGSLRVGRLFD-------EGAMAPEMISLIKRNNCGKALDIARTAR 358

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G + E  + RH
Sbjct: 359 DMHGGNGIMGEYHVMRH 375


>gi|333028133|ref|ZP_08456197.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332747985|gb|EGJ78426.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+T++  +  D  + L+G K F+++   +D  ++ A+     G      
Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           FLVP     G+P G   + L  K+G R  AT EL           LLG      +V+   
Sbjct: 184 FLVP----TGTP-GFARRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   ++ +    A   V   + +L  A+ +A+ R   G  +    +++  +ADIALD+ A
Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R+A+  D  +  +  A+ A++ A        + A      A++  GG GYI+E 
Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++   ++  G+
Sbjct: 348 PVGKLLRDARVMTLYEGT 365


>gi|291523988|emb|CBK89575.1| Acyl-CoA dehydrogenases [Eubacterium rectale DSM 17629]
 gi|291528550|emb|CBK94136.1| Acyl-CoA dehydrogenases [Eubacterium rectale M104/1]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 27/285 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           F  E       P   +   IG  GLTE   GTD  A   Q + + DG  + L+G K F++
Sbjct: 101 FGTEEQKKKYVPDLASGKKIGAFGLTEPGAGTD--AQGCQTKAVLDGDEWVLNGSKCFIT 158

Query: 237 S-PMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  ++D +I++A         GR        +++ G+P G  +   + K+G R ++T EL
Sbjct: 159 NGKVADVYIIIAITSITEDKRGRKKKNFSAFIVDKGTP-GFSFGTKEKKMGIRGSSTYEL 217

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARR 341
            F +       LLG       P+     +  LD   + ++   + +AE      I Y + 
Sbjct: 218 IFEDARIPKDALLGKEGRGF-PI----AMHTLDGGRIGIAAQALGIAEGALERTIEYTKE 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  Q   +  +AD+A  I AA  L +  A    E  +++ + +Y+ + A   K
Sbjct: 273 RKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAMKKAEF-AKNPKVSYS-VDAAKAK 330

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A AV  E ++  GG GYI E  + R  R++    I  G+
Sbjct: 331 LFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAKITEIYEGT 375


>gi|226303698|ref|YP_002763656.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226182813|dbj|BAH30917.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 15/268 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           P   T   +G +G+TE   G+D+ AIT+   +  D  Y ++G K F+++  S   I LA 
Sbjct: 116 PGMATGEILGAIGMTEPGTGSDLKAITTSATRDGDH-YVVNGSKTFITNGGSADMIALAV 174

Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL- 302
           + + + G   V  L+ D     G    R+ +K+G     T EL F++       LLG+  
Sbjct: 175 KTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGESE 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  G +    +   L     ++  +  ++ E + Y + R   G  L +         + 
Sbjct: 235 GLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYTKARQAFGHNLFE-------FQNT 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++A    ++       D               A + KYW  +   AV+   ++  GG 
Sbjct: 288 AFELAECQTIARTCRVFLDNCIEDHLNGELDGADAAMVKYWLTEQQCAVVDRCVQLYGGY 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y +S    I  G+   M
Sbjct: 348 GYMREYPIARMYEDSRVQKIYAGANEVM 375


>gi|89095580|ref|ZP_01168474.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89089326|gb|EAR68433.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 379

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 18/291 (6%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  S E       PM +       GLTE   G+D   + +  +   D  Y L+G K F++
Sbjct: 100 KFGSEEQKQKYLKPMAQGEKIGAYGLTEPGSGSDAGGMRTTARLDGDH-YVLNGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++D +++ A  +           + +    G    + + K+G RS+ T E+ F +  
Sbjct: 159 NGGIADIYVVFALTDPESRQKGTTAFIIESDFPGFSVGKKEKKLGIRSSPTTEIIFEDC- 217

Query: 296 GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349
              +   N+     E  KI ++ LD     ++   V +A+     A+ YA+ R   G  +
Sbjct: 218 --RVPKKNMLGKEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKEREQFGKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             Q  +   +AD+A  + AA  L+++ A    E     +E+A       ++K +    A 
Sbjct: 276 ALQQGIGFKLADMATSVEAARLLTYQAAWLESEGLPYGKESA-------MSKLFAGDAAM 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V  EA++  GG GY ++  + R+ R++    I  G+     L +  ++ K
Sbjct: 329 KVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMITK 379


>gi|330824118|ref|YP_004387421.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309490|gb|AEB83905.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 45/285 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225
           TP     + PK+ + E             +     LTE   G+D A++ +    I DG  
Sbjct: 102 TPEQQAKYLPKLATGE-------------MMASFALTEPEAGSDAASLRTTA--IRDGDF 146

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y ++G K F++ +P +  F ++A+        G V  F+V    E G+P G+ + +   K
Sbjct: 147 YVVNGTKRFITNAPQAGMFTLMARTNPANKGAGGVSAFIV----EAGTP-GISFGKRDKK 201

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVS 331
           +G +   T ++ F N       L+G L    G    MK+L    I++ +  ++V+   + 
Sbjct: 202 MGQKGAHTCDVIFENVRVPAANLIG-LKEGQGFKTAMKVLEKGRIHIAAVAVAVAERMLD 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +A  + YA  R   G  + +  +++  +AD   +I AA  +    A   D+    S EA+
Sbjct: 261 MA--LRYAAERRQFGQPIGNFQLVQAMLADSKAEIYAARCMVLDAARRRDDKLPNSTEAS 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A       K +  +M   V   A++  GG+GY+ E +I R YR+
Sbjct: 319 CA-------KMFATEMCGRVADRAVQIFGGAGYMSEYAIERFYRD 356


>gi|325914008|ref|ZP_08176364.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539777|gb|EGD11417.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 391

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GL+E +GG+D AA+T++  +  DG     G  W  +  +++  I+ A  +  V  FLV 
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVRDGDGWRLNGGKMWITNGSIANLAIIWAHTDDGVCGFLV- 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              E  SP G   Q + +K+  R++ T  L   N F      L  + G    +  L    
Sbjct: 196 ---ETDSP-GFSAQDITHKMSLRASVTSALFLDNVFVPEQMRLPSAAGMKAPLGCLNQAR 251

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I   ++      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L 
Sbjct: 252 YGIAWGAIGAAVACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLG 311

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              +    R E+ + A       K+  C+MA  V  +  + +G +G   E    RH
Sbjct: 312 RLKEAGTLRPEQISLA-------KWNNCRMALDVARQCRDLLGAAGITTEHVAIRH 360


>gi|225874379|ref|YP_002755838.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225792680|gb|ACO32770.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 612

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 31/285 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------E 250
           L+E   G+D   I ++     DG  Y L+G K W  ++ +++ F + A++          
Sbjct: 153 LSEASSGSDAMNIRTRATLSPDGQHYVLNGEKMWITNAGVANLFTLFARIVDPADPDPAH 212

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
            +   FL+ R     +P GL     ++K+G R ++T  L  S+       LLG+      
Sbjct: 213 TQFSAFLIER----DTP-GLTVGPEEHKLGIRGSSTCPLILSDCRVPVANLLGEAGKGHH 267

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
              ++  +         + G + SLA++I YAR R   G  + +  ++++ IAD A  I 
Sbjct: 268 IAFNILNIGRFKLGAACLGGAKHSLADSIAYARDRKAFGKSITEFGLIQQKIADAAARIF 327

Query: 368 AATALSFRLANSFDEAKSR--SEEAAYAR----------IMAPITKYWCCKMAPAVIAEA 415
              ++++R   + D A +    E+AA +R          I   I K W  +M   V    
Sbjct: 328 MGESMTYRAIGAIDAALAAIPPEQAAGSREIQKRIEAYAIECSILKVWASEMLGIVTDHG 387

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++   G GY+E+    R +R++  N I  G+     L +   L K
Sbjct: 388 VQIHAGYGYVEDYPAERAWRDARINRIFEGTNEINRLIISGFLMK 432


>gi|206975925|ref|ZP_03236836.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|206746019|gb|EDZ57415.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
          Length = 376

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +  
Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    GL   + ++K+G   + TV+L F         D+ V   P E++        
Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  LD   + +    + +AEA     I YA+ R   G  +  Q  +   +AD+A  +
Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A    +     +EA+       I K +  K A  V  EA++  GG GY +
Sbjct: 292 EAARLLVYRAAWLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 345 DYPVERFFRDAKITQIYEGT 364


>gi|254232824|ref|ZP_04926151.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C]
 gi|124601883|gb|EAY60893.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C]
          Length = 420

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 164 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 223 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 280

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 281 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 331

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 332 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 384

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 385 MREYPVARAYLDSRVQTIYGGTTEIM 410


>gi|118590352|ref|ZP_01547754.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118436815|gb|EAV43454.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 16/249 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A + ++ +KI DG Y L+G K W  +SP++D F++ A
Sbjct: 138 PKLATGEFVGCFGLTEPDAGSDPAGMRTRAEKI-DGGYKLTGSKMWISNSPIADVFVVWA 196

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + E   G  +   +LE G   GL   ++  K+  R++ T E+           LL +++ 
Sbjct: 197 KSEAHDGA-IRGFVLEKGM-KGLTAPKVGGKLSLRASITGEIVMDGVEVGEDALLPNVSG 254

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             GP   +    Y   A  ++         A  Y   R   G  L    + ++ +AD+  
Sbjct: 255 LKGPFGCLNRARY-GIAWGAMGAAEDCWTRARQYGLDREQFGRPLAQTQLFQKKLADMQT 313

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I      + R+   FD  K   E       M  + K   C  A  +  ++ +  GG+G 
Sbjct: 314 EITLGLQAALRVGQLFDAGKVAPE-------MISLIKRNNCGKALDIARQSRDMHGGNGI 366

Query: 425 IEERSIARH 433
            EE  I RH
Sbjct: 367 QEEYHIMRH 375


>gi|268568050|ref|XP_002640145.1| C. briggsae CBR-ACDH-1 protein [Caenorhabditis briggsae]
 gi|187029249|emb|CAP31592.1| CBR-ACDH-1 protein [Caenorhabditis briggsae AF16]
          Length = 421

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 36/274 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           ++E   G+D  A+ +  +K  DG  Y +SG K W  +S  +  F++ A  +       + 
Sbjct: 161 ISESGAGSDAFALKTTAKK--DGYHYLISGSKMWITNSSEAQVFVVFANADPSQKYKGIT 218

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
           CF+V R     S  G+   + ++K+G R+++T ++ F N       +LG+        + 
Sbjct: 219 CFIVER-----SQEGVSVCKEEDKLGIRASSTCQVNFDNVRVHESAILGEYG------KG 267

Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  I  L++  +++    + LA+      I Y ++R   G  LID   ++  IA    +
Sbjct: 268 YKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQIAQARTE 327

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +      + A+ +     Y R  A + K +  ++A +  A+ ++ +GG G+ 
Sbjct: 328 IEAARLLVY------NAARMKEYGIPYVR-QAAMAKLFASQVATSTSAQCVKWLGGVGFT 380

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           ++    + YR++    I  G+ N  +  +  L++
Sbjct: 381 KDFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLID 414


>gi|301063823|ref|ZP_07204313.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
 gi|300442072|gb|EFK06347.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
          Length = 539

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 44/274 (16%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISD--GI---YCLSGHKWFLSSP-MSDAFIMLAQ 248
            + +  G+TE   G+++ ++ ++ +++ D  G+   Y ++G K F+++  ++  + +LA 
Sbjct: 123 GLVVAYGVTEPEAGSNVQSLKTKAERVLDENGLIKGYRINGQKQFITNGGVAQLYTILAD 182

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                  F+VP     G   GL   + ++K G R++ T  L         L DL V   P
Sbjct: 183 APDGPSFFIVP-----GGAEGLIPGKHEDKHGIRASDTCPLS--------LEDLYV---P 226

Query: 309 VEDM-------------KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-Q 352
           VED+             K+  Y  L  A   + G   +L + I YA+ R   G  LID Q
Sbjct: 227 VEDLVGGVEGQGLKQANKVFGYTRLMVATFGLGGGVAALEKTIKYAKERVQFGTALIDKQ 286

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
               R +   A+ + AA A    +A   D      EE    ++   I KY+  +   A+ 
Sbjct: 287 GYTHRLLVPNAVKLEAARAYIEEVARRLD----TDEEDL--QVEGSIAKYFATEAGDAMA 340

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A++  GG GYI E  + +  R+    +I  G+
Sbjct: 341 NDAIQAFGGYGYIREYEVEKIKRDVKILTIYEGT 374


>gi|292654389|ref|YP_003534286.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291371260|gb|ADE03487.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 43/307 (14%)

Query: 142 LMAQLEAGH--LMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           LM +LEAG   L S +    S+V        +    + W PK+ S E             
Sbjct: 77  LMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSGE------------- 123

Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VE 250
            A+G  GLTE + G+D + + ++ ++ +DG Y L+G K W  +SP++D  ++ A+    E
Sbjct: 124 -AVGCFGLTEPQHGSDPSGMETRAERDADG-YVLNGSKTWITNSPIADVAVVWARDVSAE 181

Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           G  V  FLV     +   +G+   +++ K+  R++ T E+   +       +L  +    
Sbjct: 182 GSPVRGFLV-----ETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMN 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP+  +    +   A   V   R +  +A  YA+ R   GG +    + +  +A++A  I
Sbjct: 237 GPLSCLTQARF-GIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  ++ RL +  +    R ++ + A       K    ++A  V   A E +GG+G   
Sbjct: 296 TNAQLMAHRLTDLKERGDLRHQQVSMA-------KRHNVRVAREVTRTAREMLGGNGITT 348

Query: 427 ERSIARH 433
           + S  RH
Sbjct: 349 DYSPMRH 355


>gi|301111296|ref|XP_002904727.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
 gi|262095057|gb|EEY53109.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
          Length = 411

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 126/275 (45%), Gaps = 34/275 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  A+ ++ +   DG  Y ++G K W  ++  S  +++ A V+   G     
Sbjct: 151 LSEAGSGSDAFALKTRAEASPDGSYYSITGQKMWISNAEYSGVYLVFANVDPSKGYKGIT 210

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
           CF+V R +E     GL   + + K+G R+++T  +  ++       +LG+L       + 
Sbjct: 211 CFIVDRDME-----GLEIGKPEEKLGIRASSTCPVTLTDVKVPKENILGELG------KG 259

Query: 312 MKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALD 365
            KI I  L+   + ++   + LA+ ++     Y   R   G  + +   M+   A+ ALD
Sbjct: 260 YKIAISTLNEGRIGIASQMLGLAQGVYDQTLPYLFERQQFGSPIGEFQAMQHQYAEAALD 319

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L +  A   D  +   ++AA A++ A        ++A    ++ +E +GG G+ 
Sbjct: 320 IETARLLVYNAARLKDAGQPFVKQAAMAKLHA-------SRVAEKTASKCIELLGGIGFT 372

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +     + YR++   +I  G+ N  +  +  L+ +
Sbjct: 373 KYLLAEKFYRDAKIGAIYEGTSNMQLTTIAKLVSE 407


>gi|254392952|ref|ZP_05008118.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294817832|ref|ZP_06776474.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326446700|ref|ZP_08221434.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706605|gb|EDY52417.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294322647|gb|EFG04782.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D  A+ +   + +DG + L G K F+S+ P++D F++ A+     G F +  
Sbjct: 125 ITESGSGSDALAMRTTATRDADGGFVLRGSKSFVSNGPVADVFVVYARTHPDGGPFGISA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + + +  GL       K+G R++   EL F +              GFL+ D       
Sbjct: 185 FVVERNTPGLTVGAPVGKMGLRTSPLSELHFDDCRIPASAVLGRVGSGFLILD------H 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V   +IL+     I+S   MR  L   + YA+ R   G  +     +   I D+ + +  
Sbjct: 239 VMKWEILLAF---IISTGQMRYRLDRCVEYAKERTQFGQAIGSYQAISHRIVDMKIGLET 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +    +  A      ++ + + + ++++A        + A A    A++  GGSGY+ E 
Sbjct: 296 SRKWLYDTAVRMTAGENVTTDISISKVIA-------SESALASAQAAVQIFGGSGYLTEC 348

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++ A  I  G+
Sbjct: 349 GLEKDLRDAVAGPIYSGT 366


>gi|163737634|ref|ZP_02145051.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
 gi|161389160|gb|EDQ13512.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           A  +F  E       P+ ++  AI    LTE + G+D+A  T    +  DG  Y L+G K
Sbjct: 99  AISLFGTEAQQAEWLPLTRSGKAISAFALTEPQSGSDVANSTMTAMR--DGEHYVLNGEK 156

Query: 233 -WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  +  ++D + + A+  EG     +  F+VP     G P     +RL+  +     AT
Sbjct: 157 TWISNGGIADIYTLFARSGEGPGAKGLSAFVVPA----GLPGFEVVERLET-LAPHPLAT 211

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARR 341
             L FS+       LLG      G    M +L    S + + + G  R +L EA+     
Sbjct: 212 --LRFSDCRIPRSALLG--APGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTS 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPIT 400
           RHV G  L D  +++  IAD+ALD+ A+  L +R A + D   +R + EAA A       
Sbjct: 268 RHVQGARLADLQMVQGHIADMALDVDASALLVYRAAWAKDSGAARITREAAMA------- 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           K +    A  +I +A++  GG G  + + +   YR+  A  I  G+ +
Sbjct: 321 KLFSTDQAQKIIDKAVQLHGGDGVRQGQKVEELYRDIRALRIYEGASD 368


>gi|157691425|ref|YP_001485887.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
 gi|157680183|gb|ABV61327.1| possible acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus
           SAFR-032]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 29/258 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D   + +  QK     Y L+G K W     ++D FI++A+   +V  FLV
Sbjct: 120 FALSEPNIGSDANHVETSYQKEGQS-YVLNGKKKWISFGAIADFFIVIARDGEQVTAFLV 178

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--GPVE---DMK 313
            R     +  G+  +R+   + NR++   E+   +        +N S+  GPV    +  
Sbjct: 179 DR-----NQPGVEIERITGMMANRASYLAEITLDHVH------VNESSVLGPVGGGFNHV 227

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + + LD    SV+   +++A+      + Y+R+R      L    ++K  I D    + A
Sbjct: 228 VSLALDHGRYSVAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHA 287

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL  + A    EA         A     I KY+  K+A  +    ++  GGSG+  E 
Sbjct: 288 ARALCLK-AGEMREANHPD-----AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSREN 341

Query: 429 SIARHYRESPANSILLGS 446
           S +R YRE+    I+ G+
Sbjct: 342 SASRLYREAKVLEIIEGT 359


>gi|86130775|ref|ZP_01049374.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85818186|gb|EAQ39346.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 39/249 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + + +  + + D  Y L+G K W  +SP  D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPSGMVTNFKDMGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V R +E     G       NK   R++AT EL F         D+ V   P E++     
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQ--------DVKV---PKENLLPNKS 238

Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  
Sbjct: 239 GLGAPLGCLDSARFGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMIT 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  L+FRL    +E ++ S + + A       K    +MA  +  EA + +GG G 
Sbjct: 299 EITKAQLLAFRLGQLKNEDRATSAQISMA-------KRNNVEMAIKIAREARQMLGGMGI 351

Query: 425 IEERSIARH 433
             E SI RH
Sbjct: 352 TGEYSIMRH 360


>gi|109899232|ref|YP_662487.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
 gi|109701513|gb|ABG41433.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 126/255 (49%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDH-YVLNGNKMWITNGPDADTYVIYAKTDISAGSKGM 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E G+P     Q+L +K+G RS+ T EL F +     +   N+     +  ++L+ 
Sbjct: 189 SAFIVERGTPGFSQAQKL-DKLGMRSSNTCELVFEDC---PVPAENLIRNEGDGARVLMS 244

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG  + + +A     + Y   R   G  + +  +++  +AD+   + AA A
Sbjct: 245 GLDYERLVLSGGPLGIMQACMDLVVPYIHDRKQFGQSIGEFQLVQGKVADMYTQMNAARA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA A I+      +  ++A  +  +A++ +GG+GYI E    
Sbjct: 305 YVYTVARACDRGETTRKDAA-AVIL------YSAELATKMALDAIQLLGGNGYINEFPAG 357

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 358 RLLRDAKLYEIGAGT 372


>gi|332284306|ref|YP_004416217.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330428259|gb|AEC19593.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 384

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 164/412 (39%), Gaps = 40/412 (9%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           E+ LS   Q  A+ A +Y   +L    P   RWD     P       R+   G  C+I+ 
Sbjct: 2   EFRLSDEQQAFAQAARDYAVGELE---PHAARWDAESIFP--REAFARAGELGF-CAIY- 54

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                   +    +   RL      E      PS T+   +  M T  +   WA +    
Sbjct: 55  ------APESIGGLGLPRLDATLVFEEMAAYDPSTTAFLTIHNMATWMIGS-WASESVRN 107

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            + P   A  +  S      LTE   G+D A+++++  K     Y L+G K F+S     
Sbjct: 108 AWGPQLAAGEKLASYC----LTEPGAGSDAASLSTRADK-KGASYVLNGAKAFISGAGDT 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++    G  G   +          G+ Y R ++K+G  S +T  + F N     +  
Sbjct: 163 DLLVVMARTGEAGARGISAFAVPADTPGITYGRKEDKMGWNSQSTRPITFDNV---EVPA 219

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVM 355
            N+     E  K  +  LD   ++++   V  A+  + A RR++      G  L D   +
Sbjct: 220 ENLLGQEGEGFKFAMKGLDGGRINIATCSVGAAQGAYDAARRYMGERKQFGHALADFQAL 279

Query: 356 KRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +  + D+   I A+  +  RLA S   D+    S   A A+ +A    +  C        
Sbjct: 280 QFKLVDMLTHIVASRQM-VRLAASKLDDQDPQASSYCAMAKRLATDLCFQAC-------L 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           +A +  GG GY+++  + R  R++  + IL G+   M V+    LLEKG ++
Sbjct: 332 DAQQIHGGYGYLKDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLEKGADI 383


>gi|169826446|ref|YP_001696604.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168990934|gb|ACA38474.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 393

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q   V IG  GLTE   G+D+AA+++   +  D  Y ++G K W     ++D FI+ A  
Sbjct: 110 QAKGVRIGAFGLTEPGAGSDVAAMSTTAVRDGDH-YVINGQKTWISLCDIADHFIVFAYT 168

Query: 250 EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +       +  F+V R     S  G   + +K K G R+  T EL F +     +   N 
Sbjct: 169 DKSKKHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFED---LRVPAENR 220

Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                E  KI +  LD+   +V+   V L +A     + Y   R   G  + +  ++ + 
Sbjct: 221 LGEEGEGFKIAMSALDNGRFTVAAGAVGLIQACLEASVKYCHERETFGKPIGEHQLVGQM 280

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++      +  L +R+    ++    + E + A       K+  C  A     +A++ 
Sbjct: 281 LANMDAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQI 333

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            G  GY +E  +AR+ R S A  I  G+
Sbjct: 334 HGAYGYSDEYPVARYLRNSKAPVIYEGT 361


>gi|311743451|ref|ZP_07717257.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312581|gb|EFQ82492.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256
           L+E   G+D AA+ +   +  D  Y ++G K W      +D + ++A+     GR + CF
Sbjct: 127 LSEAHAGSDPAAMRTTAVRDGD-EYVINGAKAWTTHGGEADVYKVMARTSDTGGRGISCF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVP     G+P GL     + K+G  S+ T  + F +    +  D  +          L 
Sbjct: 186 LVPA----GTP-GLTADNPEQKMGLMSSTTATMLFEDVR--IPADRRLGEEGQGLSIALA 238

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD+  + ++ +   +A+     A+ YA+ R   G  ++D   +   +AD+A  + +A A
Sbjct: 239 GLDAGRLGIAAVATGVAQGALDVALAYAKEREAFGRPIVDHQGLTFLLADMAAAVESARA 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D  +  + +A+ A+++A          A  V  +A++ +GG+GY ++  + 
Sbjct: 299 TYLHAARLKDAGRPYARQASIAKLVA-------TDNAMRVTTDAVQVLGGAGYTKDFPVE 351

Query: 432 RHYRESPANSILLGS 446
           R+ RE     I  G+
Sbjct: 352 RYMREVKVMQIFEGT 366


>gi|254284111|ref|ZP_04959079.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680314|gb|EED36663.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +K   G Y L+G+K W  + P +D +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLKAEK-RGGRYVLNGNKMWITNGPDADTYVIYAKTDPNAGSRGM 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E  SP    +Q+L +K+G R + T EL F +       +LG+       +  M  
Sbjct: 189 TAFIVERDSPGFSRHQKL-DKLGMRGSNTCELVFEDCEVPAENVLGEEGRGVAVL--MSG 245

Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L Y + A++S   V  M   L + I Y   R   G  +    +++  +AD+   ++AA A
Sbjct: 246 LDY-ERAVLSGGPVGIMMACLDQVIPYIHDRKQFGQSIGKFQLIQGKVADMYTHLSAARA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L + +A + D  +   ++AA   + A        + A  +  +A++ +GG+GYI E    
Sbjct: 305 LLYAVARACDRGEECRKDAAAVILFA-------AEKATQMALDAIQLLGGNGYINEFPTG 357

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 358 RLLRDAKLYEIGAGT 372


>gi|254506633|ref|ZP_05118774.1| isovaleryl-CoA dehydrogenase,   (IVD) [Vibrio parahaemolyticus 16]
 gi|219550506|gb|EED27490.1| isovaleryl-CoA dehydrogenase, (IVD) [Vibrio parahaemolyticus 16]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 31/282 (10%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           AIG L ++E   G+D+ ++  +     D  Y L+G+K W  + P +D  I+ A+ +   G
Sbjct: 126 AIGALAMSEPNAGSDVVSMQLKATLNGDH-YRLNGNKMWITNGPDADVIIVYAKTDSSAG 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +   + + + +G  + +  +K+G R + T EL F++       +LG++N      + 
Sbjct: 185 SHGITAFIVERAFSGFSHAQRLDKLGMRGSNTCELVFNDCLVPVENVLGEVN------KG 238

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +++L+  LD   + ++G     M+  L   I Y   R   G  + +  +++  +AD+   
Sbjct: 239 VQVLMSGLDYERVVLAGGPLGIMQACLDLVIPYVHERKQFGKAIGEFQLVQAKVADMYTR 298

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA +  + +A + D  ++  ++AA   +       +  ++A  +  +A++ +GG+GYI
Sbjct: 299 TNAARSYVYTVAAACDRGEATRKDAAGVIL-------YSAELATQLALDAIQLLGGNGYI 351

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            E    R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 352 NEFPAGRLLRDAKLYEI--GAGTSEIRRIL----IGRELFEE 387


>gi|327314010|ref|YP_004329447.1| acyl-CoA dehydrogenase [Prevotella denticola F0289]
 gi|326944922|gb|AEA20807.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola F0289]
          Length = 577

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E + YA+ R   G  +I  P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D  K+              R E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L   +   LE +
Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467

Query: 476 LGSSGKKVITILRDSIS 492
           L     K    LRD ++
Sbjct: 468 LACDCMKA---LRDRVA 481


>gi|302342718|ref|YP_003807247.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639331|gb|ADK84653.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIY-CLSGHKWFLSSPMSDAFIMLA 247
           PM    V    GLTE   G+D +  IT+    + DG Y  LSG K F+++  +    ++ 
Sbjct: 114 PMCDGRVIGAFGLTEPGAGSDPSGQITT---AVRDGDYWVLSGVKQFITTGSNAGLTIVT 170

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294
               +      V  FLVP+    GSP GL   + ++K+G +++ TV+L         +N 
Sbjct: 171 AYTDKSKKHRGVSAFLVPK----GSP-GLVVGKAEDKLGLKASDTVQLILEDCRVPAANM 225

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       V+   ++  +I I    A  S+   R  L EA+ +   R   G  +     
Sbjct: 226 LGREGEGFRVAMTCLDAGRIGI----AAQSLGVARACLDEAVTFIDSREQFGRAISQFQG 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD+A +I AA  L    A    + +  + EA+ A++ A        +M   + ++
Sbjct: 282 VRWRIADMATEIEAAELLCVNAALLKAQGQRFTAEASMAKLFAS-------EMVNRITSQ 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++  GG G+ +E  I RH+R++   +I  G+
Sbjct: 335 CLQLHGGYGFCKEYDIERHFRDARVFTIYEGT 366


>gi|258570827|ref|XP_002544217.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237904487|gb|EEP78888.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 430

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ E   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETTSKGFSCARKLDKLGMRGSNTGELIFEDLFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG +N        +K+L+    L+  ++S      M+ +L   + Y   R     
Sbjct: 261 PKENVLGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFNT 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +AD+   +AA+ A ++  A   D +    E              +  + 
Sbjct: 315 PIAHNQLVQGKLADMYTKLAASRAYTYNTARQIDNSADSPEGPQIRTQDCAGAILYAAER 374

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413


>gi|228990463|ref|ZP_04150428.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
 gi|228768989|gb|EEM17587.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
          Length = 405

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GLTE   G+D+ A+ +   K  D  Y L+G K W     ++D F++ A+         +
Sbjct: 123 FGLTEPNAGSDVVAMQTTAVKQGDH-YVLNGSKTWISLCDVADHFLIFAKTNPELKHRGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
            CF+V R        G+  + +K K+G R+  T E+   E       LLG+        E
Sbjct: 182 SCFIVERTFP-----GVSTKAIKGKLGIRAGNTGEVFLDEVKVPAENLLGEEG------E 230

Query: 311 DMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD+   +V+      ++ SL  ++ Y   R   G  +    ++++ IA ++ 
Sbjct: 231 GFKIAMASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSA 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++  +  L ++     +E K  + E + A+ +A       C  A     +A++  G  GY
Sbjct: 291 NLEISRLLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + R+ R + A  I  G+
Sbjct: 344 SNEFPVERYLRNAKAPVIYEGT 365


>gi|146760115|emb|CAJ77661.1| acyl-CoA dehydrogenase [Mycobacterium chelonae]
          Length = 611

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 43/287 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+ +   E G P   NG+    +++K+G + +AT EL          G+L+
Sbjct: 224 TKGLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMK 356
           G+++     + D+     +     +++ +      A+ YA+ R V G     L D+   +
Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTR-VQGADMTQLTDKTAPR 342

Query: 357 RAIA---DIALDIAAATALS------FRLANSFDEAKS-------RSEEAAYAR-IMAPI 399
             I    D+   +    A +      +  A +F +A +        +EEA     ++ PI
Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYATTFQDAVAAKAINGVEAEEAVRLNDLLLPI 402

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K    + A   + E+++  GGSG++++  I ++ R++  +S+  G+
Sbjct: 403 IKGVGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449


>gi|33592628|ref|NP_880272.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33572274|emb|CAE41826.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332382045|gb|AEE66892.1| glutaryl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 397

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
            GLTE   G+D   + ++  K  DG Y L+G+K W  +SP++D F++ A+      +G++
Sbjct: 137 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310
             F++ + ++     GL    +  K+G R++ T E+   E   +   ++  ++   GP  
Sbjct: 196 RGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 248

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   ++   +  AEA  H AR+    R   G  L    ++++ +AD+  +
Sbjct: 249 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        RL    DE  +  E       +  I K   C  A  +   A + +GG+G  
Sbjct: 305 ITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357

Query: 426 EERSIARH 433
           +E  +ARH
Sbjct: 358 DEFGVARH 365


>gi|222085090|ref|YP_002543620.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221722538|gb|ACM25694.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 592

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/403 (21%), Positives = 161/403 (39%), Gaps = 60/403 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLM 152
           KV     W  L R  I  G     W+    P     +   H +  A L +         +
Sbjct: 69  KVVLPDGWEKLYRDWIAGG-----WNGLTAPEEYGGQGLPHMLNVATLEMWNSASMAFGL 123

Query: 153 SPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +P++T  ++ AL+   +  +   +  K+ + E+  T             + LTE   G+D
Sbjct: 124 APTLTMGAVEALVAHGSADLKSKYLAKLVTGEWAGT-------------MNLTEPHAGSD 170

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEGRVGC-----FLVP 259
           + A+ ++  + +DG Y L G K F++    +A      F++    +   G      FLVP
Sbjct: 171 VGALRTRADRHNDGTYRLFGQKIFITWGDHEAAENIIHFVLARIPDAPAGTRGISLFLVP 230

Query: 260 RLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVST 306
           + L  +DGS    N      L++K+G   + T  + + +           +L+G+ N   
Sbjct: 231 KFLVNDDGSLGARNDYFAHSLEHKLGIHGSPTCTMIYGDGKYGDERGAVAWLVGEENKGL 290

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGI--LIDQPVMKR 357
             +  M     L   I  V+    +  +AI YA+ R         + G+  +I+ P + R
Sbjct: 291 ACMFTMMNNARLAVGIQGVAIAEAATQKAIAYAKERTQGRAPGTTAFGMSPIIEHPDIAR 350

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIA 413
            +  +      + A+ +  A + D +   + +A Y    A ++ PI K +       V +
Sbjct: 351 MLLTMKALTQGSRAICYACAEAIDMSHRDAGKARYWQERAALLTPIAKSFSTDAGVDVAS 410

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++  GG G+IEE   AR  R++    I  G+     +D++ 
Sbjct: 411 LGIQVHGGMGFIEETGAARLLRDARIAPIYEGTNGIQAIDLVT 453


>gi|26788031|emb|CAD58772.1| novel protein similar to human isovaleryl Coenzyme A dehydrogenase
           (IVD) [Danio rerio]
 gi|47939423|gb|AAH71451.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio]
          Length = 418

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257
           L ++E   G+D+ ++    +K  D  Y L+G+K W  +   +D  I+ A+ +   V   +
Sbjct: 159 LAMSESNSGSDVVSMKLTAKKQGDH-YVLNGNKFWITNGSDADVLIVYAKTDPEAVARGI 217

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E G P     Q+L +K+G R ++T EL F +       +LG LN     +     
Sbjct: 218 TAFIVEKGMPGFSSAQKL-DKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLD 276

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L  A   V  M+  L  AI Y   R   G  +    +M+  +AD+   +++     +
Sbjct: 277 LERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 336

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + D+    +++ A   +       +C + A  V  + ++C+GG+GYI +  + R  
Sbjct: 337 NVARACDKGHFSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPMGRFL 389

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 390 RDAKLYEIGAGT 401


>gi|307325800|ref|ZP_07605000.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306888588|gb|EFN19574.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 390

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 44/290 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCF 256
           + +TE+  G+D + I +   +  DG Y L+G KWF++    +D  I+LA V  +     F
Sbjct: 121 VAITEEHAGSDPSGIRTTATRDGDG-YVLNGEKWFVTVGDAADFLIVLAYVRPDNEPTMF 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-----GFLLGDLNVST----- 306
           LV     D    G+  +R                +++TF      FL  D+ V       
Sbjct: 180 LV-----DKDTPGVSVKRTPR-------------YTHTFVYEHPEFLFQDVRVGQDAVLG 221

Query: 307 --GPVEDMKILIYLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             G   D+    + +  +M    ++     +L  A+ +A+ R   G +L+++ +++  IA
Sbjct: 222 RIGEGYDLTRDWFTEERLMIAARTIGAAERALRLAVDWAKEREQGGDVLMNRQLIQGMIA 281

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   +IA   A + ++A  FD+   R          A   K    + +  ++   ++  G
Sbjct: 282 DSVTEIATNRAFTHQVAWEFDQGGDRK----TLHAKAATAKLAASEASNRIVDRCVQIFG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           G GY+ +  + R +RE   + I  G+     L + N  E G    + L S
Sbjct: 338 GRGYMRDMPVERLWRELRVDRIWEGTSEIQRLVIAN--EVGKRGLDDLLS 385


>gi|255318739|ref|ZP_05359966.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255304237|gb|EET83427.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 384

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K +++ +P +  F ++A+        G + 
Sbjct: 124 LTEPESGSDAASLRTTAVKNGD-FYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLV    E  +P+ +   ++  K+G + + T ++ F N       L+G +    G    
Sbjct: 183 AFLV----EADNPS-ITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +    V +AE     A+ YA  R   G  +    +++  +AD   +I
Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D+ ++ S EA+        +K +  +M   V    ++  GG+GYI 
Sbjct: 294 YAAKCMVLDAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYIS 346

Query: 427 ERSIARHYRE 436
           E SI R YR+
Sbjct: 347 EYSIERFYRD 356


>gi|167624816|ref|YP_001675110.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354838|gb|ABZ77451.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   T   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F +     + + N+  G    +K+L+  LD   +
Sbjct: 195 RGSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +SG  + +  A     + Y   R   G  +    +++  +AD+   + AA +  + +A 
Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R++ 
Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 365 LYEIGAGT 372


>gi|121607872|ref|YP_995679.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552512|gb|ABM56661.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 381

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ +  +     +TE   G+D++ I +   + +DG + L+G K W  ++P++D   +LA
Sbjct: 109 APLLRAGLRPAYCITESDAGSDMSGIRTTATRTADG-WDLNGAKLWIHNAPVADLAFVLA 167

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---- 300
           + +   G   +   + D    G+     ++K+G R++   EL F         LLG    
Sbjct: 168 RTDPAAGKRGMSIFIVDCHLAGVSKGAKEHKMGQRASQVGELHFERVQLPREALLGPEGR 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             ++    ++  ++ I    A ++V   +  L  A+ YA  R      + +   ++  +A
Sbjct: 228 GFHIMMSALDKGRVGI----AALAVGIAQAGLEAALDYALSRKQFSSRIAEFQGIQWMLA 283

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A DI AA  L         +A  R E    A I   + K +    A    A A++  G
Sbjct: 284 DMAQDIQAARLL-------VHDAAKRLEAGDRASIACSMAKCFASDTAVRHSANAVQIFG 336

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           GSGYI    + R YR++    I  G+
Sbjct: 337 GSGYIRGYEVERLYRDAKITQIYEGT 362


>gi|319791032|ref|YP_004152672.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593495|gb|ADU34561.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 33/275 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLA--QVEGRVG 254
           L +TE  GG+D+AA+ +  ++ S G    Y L+G K F++S M   +I +A    EGR G
Sbjct: 124 LAITEPGGGSDVAALRTTARRESAGDGDHYVLNGEKTFITSGMRAHWITVAVRTGEGR-G 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307
              +  LL  G   GL  +RL  K+G   + T  L F N      +LLGD      +  G
Sbjct: 183 AGGISMLLVPGDALGLSRKRL-TKMGWWCSDTATLHFDNVRVPARYLLGDEGAGFRMIMG 241

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                +I +    A  ++   +  L EA+ ++R R   G  LI+   ++  + D+ + IA
Sbjct: 242 NFNGERIGL----AAGALGFAQACLDEALAWSRERKTFGAALIEHQAVRHKLVDMQMRIA 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-------EAMECIG 420
           +  A    ++     A+  + EAA  R  AP      C +             +A++ +G
Sbjct: 298 STEAWLEAVS-----AEGDAHEAA-GRFNAPEWVAQVCMLKNHATQTMQFCADQAVQILG 351

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           G G++      R YRE     +++G G   ++  L
Sbjct: 352 GMGFMRGTVSERIYRE--VKVMMIGGGAEEIMKEL 384


>gi|157429080|gb|ABV56602.1| acyl-CoA-like dehydrogenase [Kutzneria sp. 744]
          Length = 385

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 44/274 (16%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCF 256
           L +TE   G+DI+A+  T+ G+   DG + L+G K F+S+  S D ++++A         
Sbjct: 124 LAITEPDAGSDISAMRTTAVGR---DGGWQLNGSKTFVSNGHSADLYLVVALTPTDTRTA 180

Query: 257 LVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296
              R      L+ +    G+   RL +KIG ++  T EL F +               FG
Sbjct: 181 APARGTSASMLVVEADRAGVKRGRLIDKIGMKALDTSELFFDDVAVPARNLLGRPGRAFG 240

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +L+ +L       E M I       I +++     LAE + Y  +R V G  +      +
Sbjct: 241 YLMRNL-----VQERMWI------GISALAAAERVLAETLEYVGKRSVFGMAVGQHQSNR 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  +  A +   R   ++++ +  +E+AA       + K+W  ++   V+ + +
Sbjct: 290 HHLAELATAVEVARSHCDRAILAYNDRRLSAEDAA-------MVKWWNTELCQQVVTQCL 342

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG G++ E  +AR Y ++   +I  G+   M
Sbjct: 343 QLHGGYGFVRESVVARAYLDTRVQTIYGGTTEVM 376


>gi|156371749|ref|XP_001628924.1| predicted protein [Nematostella vectensis]
 gi|156215913|gb|EDO36861.1| predicted protein [Nematostella vectensis]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 35/267 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG 254
           G  L+E+  G+D  A+ +   +  DG + L+G K W  ++  +  F+++A V   EG  G
Sbjct: 124 GFCLSEESSGSDAFALKTVALE-KDGHFVLNGSKMWITNAEYAGVFLVMANVNPSEGYKG 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP 308
              F+VPR        GL   + ++K+G R+++T  + F N        +LG++      
Sbjct: 183 ITTFIVPR-----ETPGLSIGKKEDKLGIRASSTCPVHFDNVKVVPSSSVLGEVGHGYKY 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA-RRRHVSGGILIDQP-VMKRAIAD 361
              M     L+   + +    + LA+      + Y   RR     I  +Q   M+  IA+
Sbjct: 238 AIGM-----LNEGRIGIGAQMLGLAQGCFDHTVPYTHERRQFGRSIWSNQAWAMQHQIAE 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   I AA  L +  A   +       E A A       KY+  ++A    ++ ME +GG
Sbjct: 293 VRTKIEAARLLVYNAARRKEAGLPVVREGAMA-------KYFASEVATLTTSKCMEWMGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGN 448
            G+ +   I ++YR+    +I  G+ N
Sbjct: 346 VGFTKSYPIEKYYRDCKIGTIYEGTTN 372


>gi|329893922|ref|ZP_08269957.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328923377|gb|EGG30694.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 388

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++T +     D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 129 LAMSEPGAGSDVVSMTLRADDAGDH-YVLNGNKMWITNGPDANVYVIYAKTDPEAGSRGI 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E  SP     Q+L +K+G R + T EL F +       +LG   V  G    M  
Sbjct: 188 TAFIVERDSPGFSRAQKL-DKLGMRGSNTCELVFEDCKVPKSHVLG--QVGRGVQVLMSG 244

Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L Y + A++S   V  M+  L   + Y   R   G  + +  +++  IAD+ + ++ + A
Sbjct: 245 LDY-ERAVLSGGPVGIMQACLDVVVPYIHERKQFGQAIGEFQLIQGKIADMYVALSTSRA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +ANS D  +   ++AA   +       +  + A  +  +A++ +GG+GYI + +  
Sbjct: 304 YLYTVANSLDRGEESRKDAAGVIL-------YTAEKATQMALDAIQLLGGNGYINDYATG 356

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 357 RLLRDAKLYEIGAGT 371


>gi|323453824|gb|EGB09695.1| hypothetical protein AURANDRAFT_24725 [Aureococcus anophagefferens]
          Length = 421

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 28/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           LG+TE   G+D A I +   K  D  Y ++G K F+++  M+D  I+ A+ +   G   V
Sbjct: 162 LGMTEPSAGSDFANIKTTAVKDGDD-YVINGSKVFITNGWMADVTIVCAKTDASKGAHGV 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMK--- 313
              L +    G        K+G ++  T EL F         DL V    +  E+ K   
Sbjct: 221 SLFLIEDGMKGFTKGNKLEKMGMKAQDTCELFFE--------DLRVPKSALLGEEGKGFY 272

Query: 314 -ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  L    + ++ M VS AEA+      Y   R    G L +  V+   +A++  DI 
Sbjct: 273 AVMSELPQERLLIADMGVSAAEAVFEWTRDYTMDRSAFKGKLSNLQVVGHKLAEMKTDIC 332

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A         D   +   +     + A + KYWC  +   +    ++  GG GY+ E
Sbjct: 333 VGRAF-------VDNCIALHSQRKLDSVQASMAKYWCTDLQCKIADAGVQLHGGWGYMWE 385

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + + + +     I  G+   M
Sbjct: 386 YDVCKAFVDGRVQPIYGGANEIM 408


>gi|163746633|ref|ZP_02153990.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161379747|gb|EDQ04159.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 22/258 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRCERTNEG-YTLNGTKAFISGGGYSDAYVTMVRTSDDGAKGVSTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              +EDG+P GL +  L++K+G RS  T  ++F +     +G  N+     +  K  +  
Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWRSQPTALVQFDDC---KIGAENLVGEEGKGFKYAMAG 236

Query: 318 LDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   +++S       + +L + + Y   R   G  +     ++  +AD+ +++ AA   
Sbjct: 237 LDGGRLNISACSLGAAQTALNKTLDYMGDRKAFGQSIDQFQGLQFRLADMEIELQAARTF 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D        A  A     + K +  +    V+ + ++  GG GY+ +  I +
Sbjct: 297 LRQAAWKLDTG------APDATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEK 350

Query: 433 HYRESPANSILLGSGNAM 450
             R+   + IL G+   M
Sbjct: 351 LVRDLRVHQILEGTNEIM 368


>gi|126731871|ref|ZP_01747675.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707698|gb|EBA06760.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 19/260 (7%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           V   +G+TE   G+D+ ++ +  ++  +  Y ++G K W     ++D  ++ A+      
Sbjct: 116 VITAIGMTEPGTGSDVRSMKTFAKRQGNDSYVINGQKSWITWGGVADYVLVFAKTSEGTS 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +   L D    G    R + K+G       EL F +       +LG+    TG    
Sbjct: 176 SDSISAFLVDTKTPGFRVGRKERKMGRNGAPNHELFFEDMVVPADCMLGE--EGTGFKGC 233

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MKI   LD    +V+G  + LA+     A+ +A+ R   G  +     M+   AD+ +  
Sbjct: 234 MKI---LDLNRPTVAGSSLGLAQGALDTALAFAKERVQFGRAVSQFQGMQFKFADMHMKT 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL + +    D     S + +   ++  ++K +   +A  V  EA++ +G +GY +
Sbjct: 291 EAARALLYSVCAEID-----SGDHSRLAMLGAVSKCYVTDVAMEVTTEAVQAMGSAGYSK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++  N IL G+
Sbjct: 346 EYPVERMMRDAKLNQILEGT 365


>gi|157104647|ref|XP_001648504.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108880277|gb|EAT44502.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 405

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W      +   I+ A  +       +
Sbjct: 145 FALSEPGNGSDAGAASTTATLKGD-RWVLNGTKCWISGGYEAGNAIVFATTDKSLKHKGI 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP         G+   + ++K+G R ++T +L F +     +   N+   P    K
Sbjct: 204 STFVVPM-----DSKGISRGKKEDKMGLRGSSTCQLIFEDC---EIPKDNLLGQPGYGFK 255

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + ++G  + +A+A     + YA +R   G  +     ++  IAD++L + 
Sbjct: 256 IAMQGLDTGRIGIAGQALGIAQASLECAVDYANKRVAFGKPISKLQAIQMKIADMSLRVE 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +
Sbjct: 316 SARLLTWRAAWLKDNKKPFTKEAAQAKLAASETATFCAH-------QCIQILGGMGYVSD 368

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 369 MPAERYYRDARITEIYEGT 387


>gi|78043629|ref|YP_360435.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995744|gb|ABB14643.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 580

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 34/267 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  A  ++     DG  Y L+G K F+++   +D FI+ A+V+G +   F+V
Sbjct: 146 LTEPGSGSDALAAKTKAVLSEDGKYYILNGTKQFITNAGFADVFIVYAKVDGDKFTAFIV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            R        G+ +   + K+G + ++T       V++   N  G       V  G V  
Sbjct: 206 ERDFP-----GVSFGPEEKKMGIKGSSTRQVILEDVKVPVENVLG------EVGKGHVIA 254

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL               +++L+ A+ YA  R   G  + +  ++K  I  +A    AA
Sbjct: 255 FNILNIGRFKLGAGCAGSCKLALSTAVKYANERSQFGQPIANFGLIKNKIGRMAAYTFAA 314

Query: 370 TALSFRLANSFDE------AKSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECI 419
            ++ +R A   D+       KS +E A     YA I   I K +  +    V+ E ++  
Sbjct: 315 ESMVYRTAGMMDKILGDVKGKSGAEVAKGIEEYA-IEYSINKVFASEALDFVVDETVQIF 373

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY +E    R YR++  N I  G+
Sbjct: 374 GGYGYTQEYPAERMYRDARINRIFEGT 400


>gi|83859089|ref|ZP_00952610.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83852536|gb|EAP90389.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 389

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 32/273 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR----V 253
           LG++E  GG+D+AA+ +  +   D  Y ++G K W  +   +D   +LA   +G+     
Sbjct: 123 LGVSEPGGGSDVAAVKTTAKSDGDD-YIINGTKMWITNGLKADWCCLLANTSDGKPHESK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +VP  L      G+  Q++ +KIG  S+ T +L F +      + +GD     G + 
Sbjct: 182 SLIMVPMDLP-----GIEKQKI-HKIGMHSSDTAQLFFDDVRVPKRYRIGD--EGAGFIY 233

Query: 311 DM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            M    +  IY   A  S+  +   +   I Y R RH  G  L+D   +   +A++  ++
Sbjct: 234 QMLQFQEERIY--GAASSLKNLDKQIDLTIEYTRDRHAFGQPLLDNQAIHFRLAELRTEV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               +L +R  + F E K  ++       +A + K  C ++A  V    ++  GG GY  
Sbjct: 292 ELLRSLVYRCVDDFVEGKDITK-------LASMAKLKCGRLAREVSDSCLQFWGGMGYTA 344

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +  ++R +R+    SI  G  + ++L ++  LE
Sbjct: 345 DNLVSRSFRDGRLISI-GGGADEIMLGIIAKLE 376


>gi|299536969|ref|ZP_07050274.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298727549|gb|EFI68119.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 382

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 37/288 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W PK  + +Y                + +TE   G+D+A I +    I DG  Y ++G K
Sbjct: 111 WLPKCVTGDY-------------ITAIAMTEPGTGSDLANIKTSA--IRDGDHYIVNGQK 155

Query: 233 WFLSSPMSDAFIMLA-----QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            F+++ +     ++A     Q E +  G  L+  ++E+G+P G    R   K+G  +  T
Sbjct: 156 TFITNGIHTNLAVVAVKTNPQAEKKHRGISLL--VIEEGTP-GFTKGRQLEKVGMHAQDT 212

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            EL F +       LLG+       + +      L  AI + +     L   + Y + R 
Sbjct: 213 AELYFEDCRVPVQNLLGEEGKGFHYMMEKLQQERLAVAIAAQTAAEDMLTLTLDYVKSRQ 272

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKY 402
             G  + D    +  IA++A  I         L  SF E+      A    +    + KY
Sbjct: 273 AFGKTIGDFQNTQFKIAEMATKI--------ELGKSFLESLIEEHIAGNDVVTKVSMAKY 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W  + A  +  + M+  GG GY+EE  IAR YR+ P  SI  G+   M
Sbjct: 325 WITENARDLATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372


>gi|253700710|ref|YP_003021899.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251775560|gb|ACT18141.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 592

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 48/360 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +     +DG  Y L+G K F ++  ++  + + A+V+      FLV
Sbjct: 147 LTEPDSGSDALGAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R  E     G+     + K+G + ++T ++   N       +LG+  +  G      +L
Sbjct: 207 ERGFE-----GVSVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGE--IGKGHKIAFNVL 259

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  + +LA+ I YA  R   G  +     +K  IAD+   + AA +
Sbjct: 260 NVGRFKLGAAVTGAA--KGALADGIRYANLRKQFGRTIGSFGAIKEKIADMTAALFAAES 317

Query: 372 LSFRLA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +RLA               N +D  +   EE A   +   + K +C ++   V  E +
Sbjct: 318 MVYRLAGLIDQRLATIPRDTPNYYDVYQRAIEEYA---MECAVAKVFCSEVLAFVADEVV 374

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQ 474
           +  GG G+++E    R+YR+   N I  G+      ++  LL  GT L   +     L+Q
Sbjct: 375 QIHGGYGFVQEYPAERYYRDERINRIFEGTN-----EINRLLIPGTLLARAMKGEIPLQQ 429

Query: 475 DLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           +   + + ++T     L DS+    E   L       + +A SAA  ++AG+ +  +V L
Sbjct: 430 EALKAFESLMTPSFEELDDSVPFAAEKALLVGLKQAFLVVAGSAAQKFQAGIKEEQEVLL 489


>gi|126698638|ref|YP_001087535.1| butyryl-CoA dehydrogenase [Clostridium difficile 630]
 gi|255100090|ref|ZP_05329067.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-63q42]
 gi|255305980|ref|ZP_05350152.1| butyryl-CoA dehydrogenase [Clostridium difficile ATCC 43255]
 gi|255655072|ref|ZP_05400481.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-23m63]
 gi|296451059|ref|ZP_06892801.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296880588|ref|ZP_06904550.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|115250075|emb|CAJ67895.1| Butyryl-CoA dehydrogenase [Clostridium difficile]
 gi|296260066|gb|EFH06919.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296428542|gb|EFH14427.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 378

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A   Q   + DG  Y L+G K F+++ ++ D ++++A  +   G   
Sbjct: 122 FGLTEPNAGTD--ASGQQTTAVLDGDEYILNGSKIFITNAIAGDIYVVMAMTDKSKGNKG 179

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   ++E G+P G  +   + K+G R +AT EL F +     +   N+     +  KI +
Sbjct: 180 ISAFIVEKGTP-GFSFGVKEKKMGIRGSATSELIFEDC---RIPKENLLGKEGQGFKIAM 235

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + LA     E + Y + R   G  L      +  +AD+ + + AA 
Sbjct: 236 STLDGGRIGIAAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAAR 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A + D  K    EAA A++ A  T       A  V  +A++  GG GY  +  +
Sbjct: 296 HLVYQAAINKDLGKPYGVEAAMAKLFAAET-------AMEVTTKAVQLHGGYGYTRDYPV 348

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 349 ERMMRDAKITEIYEGT 364


>gi|302545213|ref|ZP_07297555.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462831|gb|EFL25924.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 388

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 37/280 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
            GLTE  GG+D  A  +  +   + G + ++G K F+++  +D  A I +  V  R    
Sbjct: 125 FGLTEPGGGSDAGATRTTARLDEATGEWVINGTKCFITNSGTDITALITVTAVTDRTEDG 184

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
              +   +VP     G+P GL      +K+G  ++ T EL F++       LLGDL    
Sbjct: 185 RPKISSIIVP----SGTP-GLSVAAPYSKVGWNASDTRELSFADCRVPAANLLGDLG--R 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G  + ++IL   D   +++S +   LA     E++ YAR R   G  +     ++  IAD
Sbjct: 238 GYAQFLRIL---DEGRIAISALATGLAQGCVDESVSYARTREAFGRPIGANQAIQFKIAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +    A     R+A  + +A SR       +  A I K +  ++A     EA +  GG
Sbjct: 295 MEMRAHMA-----RVA--WRDAASRLVSGESFKKEASIAKLYSSEVAVTNAREATQIHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            G++ E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 348 YGFMNEYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 385


>gi|239503627|ref|ZP_04662937.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   K  D  Y L+G K F++ +P +  F ++A+        G + 
Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V     D    G+   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    L  A +SV      L ++++YA  R   G  +    +++  +AD   +I AA
Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAQFQLIQAMLADSKAEIYAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +
Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349

Query: 430 IARHYRE 436
           I R YR+
Sbjct: 350 IERFYRD 356


>gi|78042926|ref|YP_360557.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995041|gb|ABB13940.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 22/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             +TE   G+D+A++T++   I DG  Y L+G K W   +P++D  ++ A  +       
Sbjct: 123 FAITEPNAGSDVASMTTKA--IRDGDYYILNGSKMWISLAPVADIALVYAYTDPSRRAKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVE 310
           +   + D +  G+  + ++ K+GN ++    + F N       LLG       +    ++
Sbjct: 181 MSAFIVDLNSEGVTIEPIEEKLGNWASPVGAITFENVRVPGENLLGQEGQGFKICMQQLD 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D +    L SA  +V   +  L  A+ YA  R   G  +    +++  IA + ++I AA 
Sbjct: 241 DTR----LASAAGAVGVAQACLDAAVEYANTREQFGQKVGQFQMIQDWIAQMVVEIEAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A   D+    + E + A++ A  T   C          A+      GY EE  +
Sbjct: 297 LLTYRAAFLKDKGVPSTRETSMAKLFAGETASKCADY-------ALRIFSAYGYSEEYPV 349

Query: 431 ARHYRESPANSILLGSGN 448
           AR++R++    I+ G+ N
Sbjct: 350 ARYFRDAKYYQIVEGTSN 367


>gi|294651514|ref|ZP_06728826.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822602|gb|EFF81493.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 12/274 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +      + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA 
Sbjct: 113 PAIRGEYVASIAVSEVHAGSDVAAIKTTAKKEGDD-YVINGSKMWITNSLQADFFCLLAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                       ++      G+ +    NK+G RS  T ++ F N      +L+G   + 
Sbjct: 172 TSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVLQRYLVGAEGMG 231

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       + +   +V G+   + + I YA+ R   G  LI+   +    A++  +
Sbjct: 232 FMMQMMQFQEERMWACANAVGGLEKVIQQTIDYAKERTTFGQPLINNQYVHFRFAELMTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A  AL+++        ++ +       ++A + K    ++   V    ++  GG+G++
Sbjct: 292 VEALKALTYQACEQHIAGENVT-------MLASMAKLKSGRLTREVADTCLQYWGGNGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 345 WDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|134103664|ref|YP_001109325.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291004801|ref|ZP_06562774.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133916287|emb|CAM06400.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 614

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 50/292 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVRQADGSWHIDGVKRFITSADQDMTENIMHLVLARPEGEGVET 223

Query: 253 ------VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFG 296
                 +  FLVP+     E G P   NG     +++K+G  ++AT EL F        G
Sbjct: 224 KPGTKGLSLFLVPKFHFDSETGEPGERNGAFVTNVEHKMGLNASATCELTFGQHGTPAKG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---- 350
           +LLG+  V  G  +  +++ Y  +     ++  +      A+ YA+ R V G  L     
Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIGTLSTGYLNALDYAKER-VQGADLTKATD 340

Query: 351 ---------DQPVMKRAI---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394
                    + P ++R +      A  + A    +    +   + K   E+ A A     
Sbjct: 341 KTAPRVPITNHPDVRRILMLQKAYAEGLRAVYLYTGTYQDQVAQGKGAGEDVALAEAVND 400

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ PI K    + A  ++  +++ +GGSGY+++  I ++ R++  +S+  G+
Sbjct: 401 LLLPIVKGVGSERAYEMLTLSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGT 452


>gi|148224176|ref|NP_001086834.1| long-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|50418371|gb|AAH77524.1| Acadl-prov protein [Xenopus laevis]
          Length = 444

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 41/281 (14%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 173 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMSDVVIVV 230

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294
           A    E R     +   L D    G    R   KIG ++  T EL F +           
Sbjct: 231 AVTNREARTPAHGISLFLVDNGTKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQ 290

Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               F +L+ +L     P E + I      A M+++       E  +Y ++R   G  + 
Sbjct: 291 ENKGFYYLMAEL-----PQERLLI------ADMALASCEFMFEETRNYVKQRKAFGKTIA 339

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++  +A++   I         L N     A+ R + A      A + KYW   +  
Sbjct: 340 HLQTVQHKLAELKTQICVGRTF---LDNCLQLHAEKRLDSAT-----ASMAKYWASDLQN 391

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            V  + ++  GG GY+ E  IA+ Y +S    I  G+   M
Sbjct: 392 TVATQCLQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIM 432


>gi|88813675|ref|ZP_01128903.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88789062|gb|EAR20201.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              +G L ++E   G+D+ A+  +  K  D  
Sbjct: 108 TPAQKHAYLPKLLSGEH--------------VGALAMSEPGAGSDVVAMRLRADKQGDH- 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 153 YRLNGTKMWITNGPEADTLVVYAKTDPAAGSKGITAFIVERGYQGFDTAQKLDKLGMRGS 212

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHY 338
            T EL F++       +LG+ N   G +  M  L Y + AI++      M+  L  A+ Y
Sbjct: 213 DTCELVFADCRVPAENVLGEENAGVGVL--MSGLDY-ERAILAAGPLGIMQACLDTALPY 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  +AD+   + A  A  + +  + D   +  ++AA A +   
Sbjct: 270 THERQQFGQPIGEFQLIQAKLADMYTHLQACRAYVYAVGAACDRNDATRKDAAGAIL--- 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +  + A  +  EA++ +GG+GYI E  + R  R++    I  G+
Sbjct: 327 ----YAAERATQMALEAIQILGGNGYINEYPVGRLLRDAKLYEIGAGT 370


>gi|239828253|ref|YP_002950877.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808546|gb|ACS25611.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 594

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 65/358 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G +S++T  L   +       LLG+  V  G V    IL
Sbjct: 210 ERDFP-----GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--VGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368
                   + +V G + +L   + YA +R         QP+ K        A +A  + A
Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFTLTQEKFATMASRLYA 317

Query: 369 ATALSFRLANSFDEAKSRSEE-------------AAYARIMAPITKYWCCKMAPAVIAEA 415
             +  +R    FDE  S  +E             A YA I   + K++  +    ++ E 
Sbjct: 318 TESSVYRTVGLFDERMSLLDEEKAKDGKEIAKSIAEYA-IECSLNKFFATETLDYIVDEG 376

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
           ++  GG G+++E  I R YR+S  N I  G+     L V            L LL+K   
Sbjct: 377 VQIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQ 436

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           L E+L     +++G               + +++K L R   +KIAL ++  A  + G
Sbjct: 437 LQEELMMLAPEEVGD-------------GVLEQEKYLVRN-AKKIALMTAGLAAQKFG 480


>gi|163736443|ref|ZP_02143862.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|163743311|ref|ZP_02150692.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161383499|gb|EDQ07887.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161390313|gb|EDQ14663.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 406

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K +DG Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAEK-TDGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++ + ++     GL   ++ NK   R++ T E+      G  +GD +     VE +K  
Sbjct: 207 FVLEKGMK-----GLSAPKIANKASLRASITGEIVMD---GVEVGD-DALLPHVEGLKGP 257

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AEA  +A R     R   G  L +  + +  +A++  +I   
Sbjct: 258 FGCLNRARYGISWGAMGAAEACWHAARQYGLDRKQFGRPLANTQLFQLKLANMQTEITLG 317

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DEA +  E       M  I K   C  A  +   A +  GG+G   E  
Sbjct: 318 LQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARHARDMHGGNGISLEFG 370

Query: 430 IARH 433
           + RH
Sbjct: 371 VIRH 374


>gi|196016826|ref|XP_002118263.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens]
 gi|190579164|gb|EDV19266.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens]
          Length = 374

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 30/263 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG--C 255
           L+E+  G+D  A+ +   +  D  Y ++G+K W  S+ M+ AF+++A     EG  G  C
Sbjct: 117 LSEEGSGSDAFAMKTTALRSGDH-YIINGNKLWITSAHMAGAFLVMANAAPEEGYKGITC 175

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELE-----FSNTFGFLLGDLNVSTGP 308
           F+V     D    G+   R + K+G    SN  V  E      SN  G +     +    
Sbjct: 176 FIV-----DADTPGVSVPRREEKLGQHAVSNCPVTFENVKVPASNIVGEIGSGYKIIAST 230

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + + +I +    A   V   +  L   I Y   R   G  L D   M+  IA+  + + A
Sbjct: 231 LNEGRIGV----AAQMVGAAQGILDHVIPYTMERKQFGKRLFDFQAMQHQIAEATVQVEA 286

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   +      +EAA A       KY+  +MA  +  + ++ +G  GY+++ 
Sbjct: 287 ARLLAYNAARLHECNMPYVKEAAMA-------KYYSTEMACQIGLKGIKWMGALGYMKDF 339

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            I +  R+    +I  G+ N M+
Sbjct: 340 PIEKFLRDIIPGTIYEGASNVML 362


>gi|170051570|ref|XP_001861823.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167872760|gb|EDS36143.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 453

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++      D  + L+G K W      +   I+ A  +       +
Sbjct: 193 FALSEPGNGSDAGAASTTATLKGDR-WVLNGTKCWISGGYEATNGIVFATTDKSLKHKGI 251

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP         GL   + ++K+G   ++T +L F +     +   N+   P    K
Sbjct: 252 SAFVVPM-----DSKGLSRGKNEDKLGLNGSSTCQLIFEDC---EIPKDNLIGQPGYGFK 303

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD+  + V+G  + +A+A     + YA +R   G  +    +++  IAD+++ + 
Sbjct: 304 IAMQSLDAGRIGVAGQALGIAQASLECAVDYANKRTAFGKPISKLQMIQSKIADMSVRLE 363

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L++R A   D     ++EAA A++ A  T  +C         + M+ +GG GY+ +
Sbjct: 364 SARLLTWRAAWLKDNKHPFTKEAAQAKLAASETATFCAH-------QCMQVLGGMGYVTD 416

Query: 428 RSIARHYRESPANSILLGS 446
               R+YRE+    I  G+
Sbjct: 417 MPAERYYREARITEIYEGT 435


>gi|221069265|ref|ZP_03545370.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714288|gb|EED69656.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 30/287 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP      +P G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKKGMSAFIVPTR----NP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ Y++ R   G  + +   + 
Sbjct: 225 AEGEGYRIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A  I AA  L +  A+  D      +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADCATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + +GG G + +  + R YR+     I  G+ +   + +   L   T 
Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSDVQKILIQRALATSTG 380


>gi|72548349|ref|XP_843378.1| acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
 gi|323363895|emb|CBZ12901.1| putative acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
          Length = 412

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 152/348 (43%), Gaps = 46/348 (13%)

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170
           +PVV K+A       +   A LE G +                P+V+    V       +
Sbjct: 58  DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++A     R+Y P     + K +V     LTE   G+D  A+ ++ +K     + ++G
Sbjct: 118 FFNFANDAQRRKYLP----KLAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K ++++   +  F+++A V+   G     CF+V    +    +G+   R +NK+G R++
Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETSGVSVVRTENKLGIRAS 227

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
           +T EL F N     + + NV     +  KI I  L+   + +    + +A+      + Y
Sbjct: 228 STAELRFENV---EVSEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G ++ D   M+   A+ A+++ AA  + +  +      +   ++AA A     
Sbjct: 285 LFQRKQFGKLIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             KY+   +A    + A+E  GG G++++  + R YR++   +I  G+
Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385


>gi|320450263|ref|YP_004202359.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150432|gb|ADW21810.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 380

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 37/287 (12%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SP 238
            R Y P     + K  +    GLTE   G+D  ++ ++  +  D  Y L G K F+S + 
Sbjct: 102 KRRYVPR----LAKGEILGAYGLTEPEAGSDAGSLRTRAYRDGDH-YVLEGQKTFISHAN 156

Query: 239 MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEF 291
           ++  F++ A+ +   G      FLV R       +G+    LK K+G R+  T  V LE 
Sbjct: 157 VAQVFLIFAKTDPDKGSRGITAFLVER------EDGVRTTPLKGKLGLRAADTGMVFLE- 209

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
               G  +    V     +  KI L  LD+  +S++   V L +     ++ YA+ RH  
Sbjct: 210 ----GVRIPKDRVLGEEGQGFKIALSTLDTGRVSLAAGAVGLMQRALDLSLRYAKERHQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +A + LD+ A+  L++       +A ++  +     + A + K +  
Sbjct: 266 GRPIASFQLVQAHLAQMKLDLEASRLLTY-------QAVAKKLKGERYTLEASMAKLFAS 318

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           + A  V   A++  GG G+ EE  +AR YR++   ++  G+     L
Sbjct: 319 EAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEVQTL 365


>gi|229543304|ref|ZP_04432364.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229327724|gb|EEN93399.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 594

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 57/319 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  +  +  +    G  Y L+G K W  ++  +D F + AQV+G +   F+V
Sbjct: 150 LTEPSSGSDARSAKTVARLNEAGTHYILNGEKQWITNAGFADVFTVYAQVDGDKFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
            R        G+     + K+G +S++T  L        +L D+ V   PVE++      
Sbjct: 210 ERTFP-----GVSTGAEEKKMGIKSSSTRTL--------ILEDVPV---PVENVLGEIGK 253

Query: 313 --KILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI   + +       + +V   +  L  A+ YA  R      +    + K     +A 
Sbjct: 254 GHKIAFNILNIGRYKLGVGAVGSSKHVLEIALKYANGRQQFKTPISQFNLTKEKFGTMAS 313

Query: 365 DIAAATALSFRLANSFDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVI 412
            + AA +  +R    FDE  S    EE    R +A           + K++  ++   V+
Sbjct: 314 KLYAAESSVYRTVGLFDERMSHFTPEEEKDGRAVANAIAEYAIECSLNKFFASEVLDYVV 373

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEK 460
            EA++  GG G+++E  ++R YR+S  N I  G+     L V            L LL+K
Sbjct: 374 DEAVQIHGGYGFMDEYEVSRAYRDSRINRIFEGTNEINRLIVPGTYVKKAFSGELPLLQK 433

Query: 461 GTNLFEQLFSTLEQDLGSS 479
             +L E+L   + + +G +
Sbjct: 434 AQSLQEELMMMMPEQVGDA 452


>gi|169794659|ref|YP_001712452.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AYE]
 gi|169147586|emb|CAM85447.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AYE]
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 263

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 324 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397


>gi|149372377|ref|ZP_01891565.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149354767|gb|EDM43330.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 16/264 (6%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
           T   IG L +TE  GG+D+  + +   K  D  Y ++G K F+++ + SD  I+ A+   
Sbjct: 117 TGEKIGCLCITEPFGGSDVGGMRTTAVKEGDH-YIINGSKTFITNGIYSDYLIVAAKTSP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +G   +   + D    G+   +L +K+G R++ T E+ F N       L+G+ N     
Sbjct: 176 ELGNKGISIFVLDRDMPGVSATKL-DKLGWRASDTGEIAFDNVKIPAANLMGEENQGFPY 234

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +     L  L  A+ + +    +L   I Y + R   G  +     ++  +A +A ++  
Sbjct: 235 IMQHFALERLIMAVNAHARSEWALEYTIAYMKERTAFGKSISKFQALRHKVAQLASEVEM 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               ++  A      +   +EA  +++++        K++  V  E ++ +GG GY+EE 
Sbjct: 295 CKTFNYVTAQRLGNGEYVVKEATMSKLLS-------TKVSDDVAYECVQLLGGYGYMEEY 347

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            +AR+ R+S    I  G G + +L
Sbjct: 348 PLARNLRDSRLGPI--GGGTSEIL 369


>gi|260554052|ref|ZP_05826315.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404791|gb|EEW98298.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 404

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257
           L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   
Sbjct: 144 LAITEPSGGSDVAALQTKAVREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEG 202

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   
Sbjct: 203 ISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFN 261

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL  
Sbjct: 262 MERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLE 321

Query: 375 RLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             A    + K +  E     +  + +A  T  +C          A++ +GG G++     
Sbjct: 322 ETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 374

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE   N I  G+   M
Sbjct: 375 ERIYREVKVNMIGGGAEEIM 394


>gi|300772347|ref|ZP_07082217.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300760650|gb|EFK57476.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 450

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 32/275 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLS 229
            ++W PK             MQK  V    GLTE   G+  A  +T+  QK   G + L+
Sbjct: 176 KQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQG-WVLN 221

Query: 230 GHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           G K W  +S  SD  I+ A+   +G V  F+V +        G   +++K K+  R    
Sbjct: 222 GQKKWIGNSTFSDITIVWARDLDDGEVKGFIVRK-----ETPGFEVEKIKGKMALRIVQN 276

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHV 344
             +  +N        L  +    +  K+L    + +  M+V   R +   A+ Y R+R  
Sbjct: 277 GLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQ 336

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +++  + ++  ++ A   L FRL+   D  + + E A+ A++       +C
Sbjct: 337 FGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV-------FC 389

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                 ++++A E +GG+G + E ++AR   ++ A
Sbjct: 390 SLRTRDIVSKAREVMGGNGILLEYNVARFLADAEA 424


>gi|123187384|gb|ABM69268.1| GcdH [Azoarcus sp. CIB]
          Length = 395

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D  ++ ++ +K+ DG Y LSG K W  +
Sbjct: 116 FGSEETKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMVTRARKV-DGGYSLSGAKMWITN 174

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+ + G +  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
                    +    GP         L+SA   ++   +  AEA +     Y   R   G 
Sbjct: 230 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 283

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  
Sbjct: 284 PLAANQLIQKKLADMLTEITLGLQGCLRLGRLKDEGNAPVE-------LTSIMKRNSCGK 336

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A + +GG+G  +E  IARH
Sbjct: 337 SLDIARVARDMLGGNGISDEFCIARH 362


>gi|325268819|ref|ZP_08135444.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608]
 gi|324988791|gb|EGC20749.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608]
          Length = 577

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E + YA+ R   G  +I  P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D  K+              R E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L   +   LE +
Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467

Query: 476 LGSSGKKVITILRDSIS 492
           L     K    LRD ++
Sbjct: 468 LACDCMKA---LRDRVA 481


>gi|260206032|ref|ZP_05773523.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
 gi|289575421|ref|ZP_06455648.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
 gi|289539852|gb|EFD44430.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
          Length = 386

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|54023197|ref|YP_117439.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014705|dbj|BAD56075.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 387

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 16/262 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE   G+DIA++ +  ++ +DG + +SG K F+S+   +D  ++ A+ +   G   
Sbjct: 124 GFALTEPDAGSDIASMRTVARRAADG-WHVSGAKTFISNAREADLVVLFAKTDPDAGFRG 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F VP+    G+P G+ Y   ++K+G RS  T  +   +    L  D  + T      
Sbjct: 183 ITAFAVPK----GTP-GITYSEPQDKLGIRSAPTYTVYLDDVV--LPHDAVIGTEGRGGN 235

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L+ A + V+ M   +A       RR+ +       P+ +     + L    A  +
Sbjct: 236 IALTALNRARIDVAAMANGIALRAWELGRRYAAERKQFGHPIAEFQAIQLLLGACDAELV 295

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R+  + D A    +     R  A I+KY   +   A++   ++  GG+G++ E  I R
Sbjct: 296 AARV--TADWAADVKDAGQDLRRAASISKYTATEACFAIVDRVVQIHGGAGFMRESEIER 353

Query: 433 HYRESPANSILLGSGNAMVLDV 454
            YR+     I  G+    +L +
Sbjct: 354 LYRDCRILRIFEGTSQIQLLTI 375


>gi|332873475|ref|ZP_08441426.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332738300|gb|EGJ69176.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 12/257 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A    + K +  E     +   + K    +        A++ +GG G++      R 
Sbjct: 324 EETAWKMTQPKLQGPELV---VQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI 380

Query: 434 YRESPANSILLGSGNAM 450
           YRE   N I  G+   M
Sbjct: 381 YREVKVNMIGGGAEEIM 397


>gi|302344669|ref|YP_003809198.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641282|gb|ADK86604.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 381

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 46/259 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------ 252
           +GLTE   G+D+A + ++  +  D  + L+G K F+++ P++D  ++ A+ E        
Sbjct: 125 MGLTEPDAGSDVAGMKTRATRQGD-EWVLNGSKIFITNGPIADVCLVYARTEAEGDRHAG 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLG 300
           V  F+V    E G+P G    +  NK+G R++ T EL F +              GFL+ 
Sbjct: 184 VSAFIV----EKGAP-GFTAGKPLNKLGVRTSHTSELFFEDCRVPASAMCGPEGAGFLM- 237

Query: 301 DLNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                      M+ + +  SA+++  + GM   +   + YA+ R   G  +     +K  
Sbjct: 238 ----------SMQTVEWDRSALLAPFLGGMTNLIQRCVKYAKERQQFGRPIAQFQAIKHK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +AD+ L + AA  L +R+A   D+ +  +  EAA A++       W  K       + + 
Sbjct: 288 LADMRLFVDAARGLVYRIAWCKDQGRPLNHLEAAVAKL---FIGDWSLK----PTNDGVM 340

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG G+  E  + R +R+
Sbjct: 341 IHGGYGFCHEYDVERIFRD 359


>gi|241766504|ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363274|gb|EER58824.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 388

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 43/304 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    TP V   W P + + E   +               LTE   G+D A++ ++ + 
Sbjct: 96  MLGTWATPAVRDHWGPLLTTGEKLAS-------------YCLTEPGAGSDAASLKTRAEL 142

Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQV----EGRVG--CFLVPRLLEDGSPNGLCYQ 273
           +    Y ++G K F+S   S D  +++A+      G  G   F+VP         G+ Y 
Sbjct: 143 VGH-EYVINGSKAFISGAGSTDVLVLMARTGDASSGAAGISAFVVP-----ADAPGISYG 196

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVS 326
           + + K+G  S  T  + F N       LLG       ++   ++  +I I    A  SV 
Sbjct: 197 KKEQKMGWNSQPTRTISFDNVRIPADHLLGREGEGFKIAMKGLDGGRINI----ATCSVG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L  A  Y + R   G  +     ++  +AD+A ++ AA  +  RLA S  +A +R
Sbjct: 253 AAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELVAARQM-VRLAASKLDAGAR 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A     + K +       V+ EA++  GG GYI E  + R  R++  + IL G+
Sbjct: 312 D-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREYPLERLLRDARVHQILEGT 366

Query: 447 GNAM 450
              M
Sbjct: 367 NEIM 370


>gi|167924100|ref|ZP_02511191.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 390

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257
           L +TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   
Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL DG   GL    LK K+G  ++ T  L F +       L+G        +     
Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALIMQNFN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L     A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   
Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D    R+ E      M    K +  +        A++ +GG GY+      R Y
Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364

Query: 435 RESPANSILLGSGNAM 450
           RE   N I  G+   M
Sbjct: 365 REVKVNMIGGGAEEIM 380


>gi|183220651|ref|YP_001838647.1| acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910753|ref|YP_001962308.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775429|gb|ABZ93730.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779073|gb|ABZ97371.1| Acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 585

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 121/288 (42%), Gaps = 57/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDA---FIMLAQV----E 250
           + LTE   G+D+  + ++  K  DG++ ++G K F++      DA    + LA+      
Sbjct: 185 MALTEPNYGSDLPNLQTKAVKGEDGVWRITGTKRFITHACGFGDAPSIILTLARTGSTTS 244

Query: 251 GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G  G   FLV           +    ++ K+G   + T E+ F N  G L+G        
Sbjct: 245 GARGLSFFLV-------HSKDVFVASIEKKMGLHCSPTCEVVFENAPGILIG-------- 289

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRA 358
            E+ K L+    A+M+ + + ++            E   YA  R   G  + +   +K+ 
Sbjct: 290 -EEGKGLVKYSMAMMNQARLNIAAQAMGIATAAYFEGKKYAEERVQFGKTISNITAVKKM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAY--------------------ARIMAP 398
           +  +  ++AA   + +  + + D+ + + E                        A +  P
Sbjct: 349 LERMEREVAAMRCILYEASFAVDQYRWKEERGKMKGLTEKDIKKDETFKKWEKLASLFTP 408

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++KY+  +MA  V  +A++  GGSGY E+  +AR YR+    +I  G+
Sbjct: 409 LSKYYITEMANVVAYDALQIHGGSGYTEDYDVARLYRDVRITNIYEGT 456


>gi|218779317|ref|YP_002430635.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760701|gb|ACL03167.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 605

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 52/336 (15%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A M+ L  T      + P + + ++  T             + LTE   G+D+ A+ + 
Sbjct: 133 TARMIHLYGTQEQKDKYIPNLVAGKWGGT-------------MLLTEACAGSDVGALETT 179

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR------VGCFLVPRLL--ED 264
             +  DG + L+G+K F+++   D        +LA++EG       +  F+VP+    ED
Sbjct: 180 AVRNPDGTFSLTGNKIFITNGEHDLVENIIHPVLARIEGDPPGTSGISIFIVPKYFVNED 239

Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           GS    N +    ++ K+G   +AT  +         GFLLG+       + +M     +
Sbjct: 240 GSLGDRNDIVCTGVEEKLGIHGSATCSMSLGTKGKCTGFLLGEERKGMNIMFNMINGSRM 299

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIALD 365
            + +  +S    +   A++YAR R V G  L             I+ P ++R +  +   
Sbjct: 300 GTGLQGLSYASAAYLLAVNYARER-VQGRSLADFKDKSAPSVPIIEHPDVRRNLLWMKSY 358

Query: 366 IAAATALSFRL---ANSFDEAKSRSEEAAYA---RIMAPITKYWCCKMAPAVIAEAMECI 419
           +    +    L   +   + A ++ E   Y+    ++ P  K +       V  +A++  
Sbjct: 359 VDGMRSFFHYLVSCSTRMETAATQEEREIYSDLFEMLTPSIKDYLAVKGHEVCVQAIQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG+GY  +  + ++ R+    SI  G+     +D+L
Sbjct: 419 GGAGYTRDYLVEQYARDCKITSIFEGTSGIQAMDLL 454


>gi|115526303|ref|YP_783214.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520250|gb|ABJ08234.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
          Length = 390

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G+K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPVAETLVVYAKTDPAAGARGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              + +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFIVEKGMKGFSTAQKLDKLGMRGSDTGELVFVDCEVPEENVLGQVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++    A   +  M+  L   + Y   R   G  +    +++  IAD+ + + A+ A
Sbjct: 250 ERVVL----AAGPLGIMQACLDVVMPYVHERKQFGEPIGSFQLVQGKIADMYVTMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYASEKATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|327441635|dbj|BAK18000.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+AA++S  ++  D  Y L+G K W     ++D F++ A 
Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAAMSSFAKRNGDH-YILNGQKTWISLCDIADHFLVFAY 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +       +   + +    G   + +K K G R+  T EL F +     +   N+    
Sbjct: 172 TDKEKAHHGISAFIVEREWAGFSSKAIKGKYGIRAGNTGELFFEDV---RVPAENLLGEE 228

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD+   +V+   V L +A     + Y + R   G  + +  ++ + +A +
Sbjct: 229 GEGFKIAMSALDNGRFTVAAGAVGLIQACIEASVKYCKERETFGKPIGEHQLVGQMLAKM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                 +  L +R     ++    + E + A       K+  C  A     +A++  G  
Sbjct: 289 EAGYEMSRLLVYRAGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQIHGAY 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY +E  +AR+ R S A  I  G+
Sbjct: 342 GYSDEYPVARYLRNSKAPVIYEGT 365


>gi|325853068|ref|ZP_08171217.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola CRIS 18C-A]
 gi|325484442|gb|EGC87363.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola CRIS 18C-A]
          Length = 577

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  N   G ++ +  L
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  E + YA+ R   G  +I  P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D  K+              R E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L   +   LE +
Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467

Query: 476 LGSSGKKVITILRDSIS 492
           L     K    LRD ++
Sbjct: 468 LACDCMKA---LRDRVA 481


>gi|321471154|gb|EFX82127.1| hypothetical protein DAPPUDRAFT_49331 [Daphnia pulex]
          Length = 391

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252
           +TE   G+D+A+I ++ +K  D  Y L+G K W  +   ++ + +LA+            
Sbjct: 127 VTEPGAGSDVASIQTKAEKKGDD-YVLNGQKMWITNGGHANWYFVLARTNPDPKAPPHQS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+V R     +P GL   R +  +G R++ T  + F +    L+   NV  G     
Sbjct: 186 LTGFIVDRH----TP-GLTPGRKEINLGQRASDTRGITFEDV---LVPKENVLIGEGAGF 237

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D    +V+   V LA     EA  YA RR+  G  ++   ++   +A++A++I
Sbjct: 238 KIAMGAFDRTRPTVASGAVGLAQRALDEATQYATRRYTFGVPIVKHQLIMGMLAEMAMNI 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +     R A   D+ +  +  A+ A+ MA      C         +A++  GG+GY  
Sbjct: 298 ELSRLAWMRAAWETDQRRRNTYYASIAKAMAADVANKCA-------TDALQIFGGNGYNT 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E  I +  R++    I  G+
Sbjct: 351 EYPIEKLMRDAKIYQIFEGT 370


>gi|284039956|ref|YP_003389886.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283819249|gb|ADB41087.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 599

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 46/289 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           LTE   G+D  +  ++ +   DG  Y L+G K W  +   +D +I+ A+++    +  F+
Sbjct: 152 LTEPDSGSDANSGKTKAKLTEDGKHYILNGQKMWITNGGFADVYIVFAKIDEDKNLSAFI 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R  E     G+     ++K+G + + T ++ F+              N F   +  LN
Sbjct: 212 VERGYE-----GITMNEPEHKMGIKGSDTRQIFFNDCKVPVENLLSARENGFKIAVNILN 266

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +             +   I +V G +  +  AI Y+  R      +     +K  +A++A
Sbjct: 267 IGR-----------IKLGIAAVGGSKEVINHAIRYSNERKQFKTAISQFGAIKHKLAEMA 315

Query: 364 LDIAAATALSFRLANSFDEA----KSRSEEAAYARIMA--------PITKYWCCKMAPAV 411
           L + A+   S+R   + D+     K +  + A A++ A         I K    ++   V
Sbjct: 316 LKVYASETASYRAGQNIDDLIEDLKGQGMDDASAKLKALEQFSIECAIMKVHGSEVLDYV 375

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E ++  GG GY  +  + R YR++  N I  G+     + V+++L K
Sbjct: 376 VDEGVQVYGGMGYSADAPMDRAYRDARINRIFEGTNEINRMLVVDMLLK 424


>gi|195441202|ref|XP_002068406.1| GK20439 [Drosophila willistoni]
 gi|194164491|gb|EDW79392.1| GK20439 [Drosophila willistoni]
          Length = 417

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 157 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 214

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  L F N          TFG        + G
Sbjct: 215 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMLTFDNVRVPEENILGTFGH---GYKYAAG 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + +    V LA+      I Y   R   G  + +   M+  IA I
Sbjct: 272 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGEAIYNFQSMQHQIATI 322

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  L++  A   ++     +EAA A       K++  ++A     + ++ +GG 
Sbjct: 323 ATEIEAARLLTYNAARLQEQGAPFLKEAAMA-------KFYASEVAQRAAIKCIDWMGGV 375

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 376 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 413


>gi|322807513|emb|CBZ05088.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 379

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   + +   +G    + ++K+G R+++T EL F +       LLG      G    MK 
Sbjct: 181 ISAFILEKEMSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + AA
Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      ++ + +AA A++       +  + A  V  ++++ +GG GY ++  
Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEAAMYVTNKSLQILGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 LERMLRDARITEIYEGT 365


>gi|146299050|ref|YP_001193641.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146153468|gb|ABQ04322.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 393

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 32/256 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ +  + + D  Y L+G K W  ++P +D  ++ A
Sbjct: 125 PKLATGEYIGCFGLTEPDHGSDPGSMITNFKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL 302
           +  EGR+   +V R +E     G       NK   R++AT EL F N       FL    
Sbjct: 184 KNEEGRIHGLIVERGME-----GFTTPETHNKWSLRASATGELIFDNVKVPKENFLPNKS 238

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357
            +          L  LDSA   ++   +  A      A+ YA+ R   G  +    + ++
Sbjct: 239 GLGA-------PLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQK 291

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++  +I  A  L++RL    +E K+ + + + A       K     MA  +  EA +
Sbjct: 292 KLAEMITEITKAQLLTWRLGVLRNEGKATTAQISMA-------KRNNVNMAIEIAREARQ 344

Query: 418 CIGGSGYIEERSIARH 433
            +GG G   E SI RH
Sbjct: 345 MLGGMGITGEYSIMRH 360


>gi|153938784|ref|YP_001392550.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland]
 gi|152934680|gb|ABS40178.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland]
 gi|295320536|gb|ADG00914.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. 230613]
          Length = 379

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   + +   +G    + ++K+G R+++T EL F +       LLG      G    MK 
Sbjct: 181 ISAFILEKEMSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + ++   + +AE     A+ Y + R   G  L     ++  IAD+ + + AA
Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      ++ + +AA A++       +  ++A  V  ++++ +GG GY ++  
Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEVAMYVTNKSLQILGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 LERMLRDARITEIYEGT 365


>gi|93005689|ref|YP_580126.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393367|gb|ABE74642.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 601

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 46/296 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA--------Q 248
           + LTE   G+ +A I +   K  DG Y + G K ++S+    +SD  + L          
Sbjct: 163 MALTEPHAGSSLADIKTTAVKQDDGSYRVKGSKIYISAGDHELSDNIVHLVLAKVPGGPG 222

Query: 249 VEGRVGCFLVP--RLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
               +  F VP  RL +D   G  N +    L +K+G R   +  L F +    +G+L+G
Sbjct: 223 GVKGISLFAVPKYRLNDDLSVGEHNDVHLTGLIHKLGYRGATSTALSFGDAGECYGYLIG 282

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    L      + + +I +   +A++   G + SL     YA+ R   G I  +     
Sbjct: 283 EEHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSL----DYAKDR-TQGRIAPNNKPED 337

Query: 357 RAIA-----DIALDIAAATALS-------------FRLANSFDEAKSRSEEAAYARIMAP 398
            A A     D+   + A  A S                 N+ ++A  ++E +    ++ P
Sbjct: 338 AATAIIQHGDVKRMLLAQKAYSEGGISLCLYGSNLIDRINTCEDATLKAELSELLDLLTP 397

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + K W  +  P      ++ +GG+GY  E    + +R++  N I  G+     LD+
Sbjct: 398 VLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGVQALDL 453


>gi|15609861|ref|NP_217240.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium tuberculosis H37Rv]
 gi|148662565|ref|YP_001284088.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra]
 gi|148823912|ref|YP_001288666.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11]
 gi|167970053|ref|ZP_02552330.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis H37Ra]
 gi|218754459|ref|ZP_03533255.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|219558732|ref|ZP_03537808.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|253798195|ref|YP_003031196.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435]
 gi|254551779|ref|ZP_05142226.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201848|ref|ZP_05769339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289444266|ref|ZP_06434010.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289553492|ref|ZP_06442702.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605]
 gi|289570900|ref|ZP_06451127.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|289762895|ref|ZP_06522273.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|297635331|ref|ZP_06953111.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207]
 gi|297732327|ref|ZP_06961445.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN R506]
 gi|306777002|ref|ZP_07415339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001]
 gi|306780905|ref|ZP_07419242.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002]
 gi|306785530|ref|ZP_07423852.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003]
 gi|306790126|ref|ZP_07428448.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004]
 gi|306794210|ref|ZP_07432512.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005]
 gi|306798628|ref|ZP_07436930.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006]
 gi|306807476|ref|ZP_07444144.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007]
 gi|306968782|ref|ZP_07481443.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009]
 gi|306973117|ref|ZP_07485778.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010]
 gi|307080826|ref|ZP_07489996.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011]
 gi|307085418|ref|ZP_07494531.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012]
 gi|313659660|ref|ZP_07816540.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2292958|emb|CAB10900.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium tuberculosis
           H37Rv]
 gi|148506717|gb|ABQ74526.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra]
 gi|148722439|gb|ABR07064.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11]
 gi|253319698|gb|ACT24301.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435]
 gi|289417185|gb|EFD14425.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289438124|gb|EFD20617.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605]
 gi|289544654|gb|EFD48302.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|289710401|gb|EFD74417.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|308214659|gb|EFO74058.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001]
 gi|308326305|gb|EFP15156.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002]
 gi|308329834|gb|EFP18685.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003]
 gi|308333477|gb|EFP22328.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004]
 gi|308337472|gb|EFP26323.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005]
 gi|308341144|gb|EFP29995.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006]
 gi|308346071|gb|EFP34922.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007]
 gi|308353669|gb|EFP42520.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009]
 gi|308357516|gb|EFP46367.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010]
 gi|308361469|gb|EFP50320.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011]
 gi|308365064|gb|EFP53915.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012]
 gi|328457968|gb|AEB03391.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207]
          Length = 386

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|303237822|ref|ZP_07324379.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           disiens FB035-09AN]
 gi|302481968|gb|EFL45006.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           disiens FB035-09AN]
          Length = 574

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 145/325 (44%), Gaps = 33/325 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + +++K+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCGDTKM--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V +A     E ++YA+ R   G  +I  P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGVASEAYKEGLNYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGR 346

Query: 371 ALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ A   D               A+ R E   Y R+     P+ K    + A     
Sbjct: 347 SLLYQTARYVDIYKALEDIARDQKLTAEERQEMKKYKRLADAFTPLAKGINSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT--NLFEQLFST 471
           +++   GGSG+I E    R YR++   SI  G+    V+  +  +  GT  N+ +++   
Sbjct: 407 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYIINGTYLNIMKEM--- 463

Query: 472 LEQDLGSSGKKVITILRDSISLCKE 496
           LE+++    K + T +   I+L +E
Sbjct: 464 LEENVCDCMKDLKTRVERMIALYEE 488


>gi|258512363|ref|YP_003185797.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479089|gb|ACV59408.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 26/259 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQ 248
           P     + +   LTE   G+  A I +  ++  D  Y L+G KW  + S ++D F++  +
Sbjct: 108 PFVAGDIRVTFTLTEPNSGSG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLFCR 165

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +EG  G       LVPR        GL  + +   +G    A   L   +    +   L 
Sbjct: 166 LEGTSGGEGTLALLVPR-----DAPGLTVELMAPAMGIAGTAHGHLRLRDCRVPVANRLG 220

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI---- 359
              G   ++    +LD +  ++    V  AE        H    +   QP+ KR I    
Sbjct: 221 -EEGDGLEVAFRGFLDPSRTAIGMTCVGAAERALELAADHALRRVTFGQPLAKRQIIQMW 279

Query: 360 -ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A++A DI AA  L    A  FDE    + EAA A++ A        +M   V  +A++ 
Sbjct: 280 LAEMATDIEAARQLVLHAARRFDEGHPITVEAAMAKMFA-------TEMLQRVTDKALQI 332

Query: 419 IGGSGYIEERSIARHYRES 437
            GG GY +   I R YR++
Sbjct: 333 HGGPGYFKSSEIERIYRDA 351


>gi|121704720|ref|XP_001270623.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119398769|gb|EAW09197.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 431

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  ++ A++E  G++ 
Sbjct: 167 FGLTEPNHGSDPGSMETVAREHPTKKGYYLLSGSKTWITNSPISDIMLVWAKLESTGKIK 226

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R      P  L    +KNK   R++ T  ++  +       +L ++    GP   
Sbjct: 227 GFIVER--SRCPPGTLQTPAIKNKTALRASITGMIQMDDCPVPAENMLPEVEGLKGP--- 281

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + +  AR     R+   G  L    ++++ +AD A D
Sbjct: 282 ---FTCLNSARLGIAFGAMGALEDCLDRARTYALERKQFKGNPLAKYQLIQKKLADAATD 338

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++A   D  KS  E       M  + K   C  A A      E  GG+   
Sbjct: 339 AAYGTLAATQVARLKDAGKSTPE-------MISMIKRQNCDRALANARVLQEVFGGNATS 391

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 392 DEYHIGRH 399


>gi|85859865|ref|YP_462067.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85722956|gb|ABC77899.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 383

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 34/291 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K +  K+ S EY               G G+TE   G+D+ ++ S  +   D  Y
Sbjct: 104 TEEAKKKYVQKLVSAEY-------------LGGFGITEFNAGSDVMSMKSTAEDKGD-YY 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++  +D  I  A  +    G  L    +E  +  G+    L +K+G++S+
Sbjct: 150 LLNGSKTWISNANCADVIIYYAYTDKAAKGKGLSAFAVELKNNPGIRTTDL-DKMGSKSS 208

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
            T E+   N     +   N+   P +  KI+   L+   +S +   + LA+A     I Y
Sbjct: 209 PTGEIYLDNV---KVPKENLLGKPGDGAKIVFGSLNGTRLSAAAGGIGLAQACLDAAIKY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397
           A  R   G  +      +  I ++A ++ AA  + +R A   D+     + E A A+ +A
Sbjct: 266 ANEREQFGKPIGTFQANQFLIGEMATELEAARLMVYRAAWQKDQGNLGNTVETAQAKYLA 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               Y C          AM   G  GY  E  + R+YR++P  +++ GS N
Sbjct: 326 GEVAYKCA-------IGAMRIFGAYGYSTEYPVNRYYRDAPTYAMVEGSTN 369


>gi|163732157|ref|ZP_02139603.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161394455|gb|EDQ18778.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 382

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           MA    G  +S       M+    +  +   W PK+ + E                   L
Sbjct: 78  MACPSVGSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCAME-------------TVFSYCL 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D AA+ ++ ++ + G Y L+G K F+S    SDA++ + +  G  G   +  +
Sbjct: 125 TEPGSGSDAAALRTRAERSNAG-YVLNGTKAFISGGGYSDAYLTMVRT-GDAGPKGISAM 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTG 307
           L +    GL +  L+NK+G R+  T +++F +               F + +  L+    
Sbjct: 183 LIENGRAGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGEEGQGFAYAMAGLDGGR- 241

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     L+ A  ++ G + +L  A+ Y   R   G  L     ++  +AD+ + + 
Sbjct: 242 ----------LNIAASALGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQ 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     + A+  D   S + +         + K +   +A  V  +A++  GG GY+ +
Sbjct: 292 TARIFLRQAASKLDNKTSDATK------YCAMAKLYVTDVAFDVANDALQLHGGYGYLAD 345

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             I +  R+   + IL G+   M
Sbjct: 346 YGIEKIVRDLRVHQILEGTNEVM 368


>gi|260187740|ref|ZP_05765214.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
 gi|289448379|ref|ZP_06438123.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
 gi|289421337|gb|EFD18538.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
          Length = 386

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|239813343|ref|YP_002942253.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239799920|gb|ACS16987.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 35/325 (10%)

Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y MA  EA GH+    V  A  V   M TP + + +      RE+     AP        
Sbjct: 67  YAMAMAEALGHVSCGGVPMAIGVQTDMCTPALAR-FGSDELRREF----LAPAIAGETVG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGRV-- 253
            +G++E   G+D+A + S  +K  DG  Y +SG K W  +S  +D   ML    +G V  
Sbjct: 122 CIGVSEPGAGSDVAGLKSHARK--DGADYLISGQKMWITNSLQADWMCMLVNTSDGPVHR 179

Query: 254 --GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
                +VP      SP G+   +   KIG  S+ T  + F N      + +G+     G 
Sbjct: 180 NKSLVMVPM----DSP-GIEKAKKIRKIGMHSSDTGLIHFDNVRVPQRYRIGE--EGQGF 232

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           V  M+      L +A  S+  M   +A+ I +A++R + G  L DQ  ++  +A++  ++
Sbjct: 233 VYQMQQFQEERLWAAASSLEPMEDCIAQTIEWAQQRQMFGATLADQQWVQFKLAELKTEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  AL++R  +   + +   E A+ A++          ++   V    ++  GG G+  
Sbjct: 293 EALRALAYRACDLHVQGQDVLELASMAKLKT-------GRLTRQVADTCLQFWGGMGFTL 345

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R YR+    SI  G+   M+
Sbjct: 346 ENRVSRLYRDGRLGSIGGGADEVML 370


>gi|170755246|ref|YP_001782838.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra]
 gi|169120458|gb|ACA44294.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra]
          Length = 379

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F+++   +D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   + +   +G    + ++K+G R+++T EL F +       LLG      G    MK 
Sbjct: 181 ISAFILEKEMSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + ++   + +AE     AI Y + R   G  L     ++  IAD+ + + AA
Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A      ++ + +AA A++       +  + A  V  ++++ +GG GY ++  
Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEAAMYVTNKSLQILGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 LERMLRDARITEIYEGT 365


>gi|145521412|ref|XP_001446561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414039|emb|CAK79164.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 31/268 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           K + PK+ S E+              IG L ++E   G+D+ ++ +  +K+ D  Y L+G
Sbjct: 126 KKYLPKLCSGEW--------------IGALAMSEPNAGSDVVSMKTTAKKVGDK-YILNG 170

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  + P++D  ++ A+ E       +   + +    G    +  +KIG +S+ T  +
Sbjct: 171 SKMWITNGPVADVIVVYAKTEPEKKQHGITAFIVEAGMKGFSRGKKLDKIGMKSSDTGPI 230

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       +LG++N   G    M  L Y  L  A   V  M+ +   +  Y   R  
Sbjct: 231 YFDNVEVPAENVLGEVN--KGVYVLMSGLDYERLVLAAGPVGLMQAAFDISREYCNTRQQ 288

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +M+  +A++   + A+ A+ + ++ + D     + + A A I      Y+ 
Sbjct: 289 FGKPIGQFQLMQGKLAEMYTTLQASRAMLYSVSRAVDAGNITNTDCA-ALI------YYT 341

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A  V  EA++C+GG+GY +E  + R
Sbjct: 342 SVNATQVGLEAIQCLGGNGYTQEYPVGR 369


>gi|110833845|ref|YP_692704.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646956|emb|CAL16432.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 388

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 28/274 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  +++++ +K+ DG Y L+G K W  +SP++D  ++ A ++G++  F+V
Sbjct: 134 FGLTEPDHGSDPGSMSTRAKKV-DGGYLLNGSKTWITNSPIADVAVVWANLDGKINGFVV 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R  +     G    +++ K   R++ T ++   + F      L+V    GP        
Sbjct: 193 ERGFD-----GFSAPKIEGKFSLRASITGQIMLDDCFVPEQNRLDVEGLKGPFS------ 241

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE     A  Y   R   G  L    ++++ +AD+  +I     
Sbjct: 242 CLNKARYGISWGAMGAAEFCWQAARQYTLDRKQFGRPLAATQLIQKKLADMQTEITLGLQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + +L    D          +A  M  + K   C  A  +  +A +  GG+G  +E  + 
Sbjct: 302 GALQLGRLIDAGN-------WAPEMVSLMKRNNCGKAIDIARQARDMHGGNGISDEYHVI 354

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           RH     A +   G+ +   L +L   + G   F
Sbjct: 355 RHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 387


>gi|332141327|ref|YP_004427065.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551349|gb|AEA98067.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 384

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  K  +G Y L+G K F+S   S   +++    G  G   V   
Sbjct: 124 LTEPGAGSDAASLKTKATK-ENGGYVLNGAKVFISGAGSTDILVVMARTGEDGPKGVSAF 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKI 314
               + +G+ Y + + K+G  +  T  + F N      +LLG+      ++   ++  +I
Sbjct: 183 AVPANTDGIEYGKAEEKMGWNAQPTRMITFDNVKLDESWLLGEEGQGFKMAMQGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  SV   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +  
Sbjct: 243 NI----ATCSVGTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAARQMVR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D   + +++  Y      + K +   +   V  +A++  GG GYI+E  + RH+
Sbjct: 299 MAACKLD--NNDADKTTYC----AMAKRFATDVGFNVCNDALQLHGGYGYIKEYPLERHF 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDVRVHQILEGTNEIM 368


>gi|24213114|ref|NP_710595.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193817|gb|AAN47613.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 43/281 (15%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVG 254
           G+G+TE   GTD+  + +   K  D  Y L+G K ++++  +   F++ A++     R  
Sbjct: 132 GMGMTEPGAGTDVLGMRTIAVKKGDK-YVLNGSKQYITNGNVGSVFLVYAKMNKDSKRTT 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F+V     + S  G    + + K+G RS+ T +L F         D  V   P E++  
Sbjct: 191 SFIV-----ESSFPGFSVGKKEEKMGMRSSPTTQLIFE--------DCEV---PAENLVG 234

Query: 313 -------KILIYLDSAIMSVSGMRVSLAE------AIHYARRRHVSGGILIDQPVMKRAI 359
                   ++  L+   ++++   + +A+      A +  R R   G  L +   ++R +
Sbjct: 235 QEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTIRHREAFGKKLSEFGQIQRLL 294

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+   D  AA AL +++A+        S  AA A+++A        +MA  V   A++ +
Sbjct: 295 AESYADYQAARALVYQVASGIHPESRNSLGAASAKLVA-------TQMAERVSRNAIQAL 347

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  E  + R +R+S   SI  G+  AM  +++  L+K
Sbjct: 348 GGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKK 388


>gi|85712000|ref|ZP_01043054.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85694186|gb|EAQ32130.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D F++ A+ +       +
Sbjct: 130 LAMSEPNAGSDVVSMKLKAEKKGD-KYVLNGNKMWITNGPDADVFVIYAKTDAEKASRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +K+G R + T EL F +       +LG+LN   G VE +   
Sbjct: 189 TAFIVEKNTPGFSQAQKLDKLGMRGSNTCELVFEDAEVPAENILGELN---GGVEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M+  L   + Y   R+  G  + +  +++  +AD+     AA A 
Sbjct: 246 LDYERAVLAAGPLGIMQACLDAVVPYIHDRNQFGKAIGEFQLVQGKVADMYTRTNAARAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 306 VYAVAQSCDRGETTRKDAAGAIL-------YAAELATQLALDAIQLLGGNGYINEYPTGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|121605595|ref|YP_982924.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594564|gb|ABM38003.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 42/283 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVP 259
           +TE   G+D A I +  +K   G + L+G K F+S    SD F++ A+  E  +  F+V 
Sbjct: 125 ITESGAGSDAAGIKTHAKKTDTG-WVLNGSKHFISDGEWSDFFLVSAKTGEKEISMFMVD 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
           +    G P G    + +  +G R    +EL F N               F   +G LNV 
Sbjct: 184 K----GLP-GFTVGKDQKMMGLRGTPHLELFFDNVPLEAVTLLGEEGQGFKLAMGALNV- 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                     + L        G    + E  + YA  R   G  + D  ++++ +AD  +
Sbjct: 238 ----------VRLAQVGARAVGKASHVCELMVDYANERKQFGQRIGDFQMVQQQLADSVI 287

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  + +  A   D+     E+ A  ++ A  T          V+  A++  GG G+
Sbjct: 288 EINAARWMVYHAAWMLDQGMDAREQIAMVKVQAAET-------LGRVVDRAVQIFGGMGF 340

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFE 466
            +E  I R+YR++    I  G+       +  + ++KG  LF+
Sbjct: 341 CKELPIERYYRDARIYRIFDGTSEIHRSVIAKMVMKKGAALFD 383


>gi|94984536|ref|YP_603900.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94554817|gb|ABF44731.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256
           G  +TE   G+D A I ++ +K  D +Y L+G K ++S +P++    ++A  +   G   
Sbjct: 122 GFAITEPSSGSDAANIRTKAEKRGD-VYVLNGTKHYISNAPIAGLLTVIAITDPSQGTRG 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   L+E  S  G+   ++  K+G +   + E+ F +       LLG  N+  G  E + 
Sbjct: 181 MSAFLVEPQSTPGVSIGKIDEKMGQKGALSSEVIFQDAEIPAANLLGPENL--GYREALG 238

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           IL    +  A  S   M+  L  ++ +A+ R   G  +     ++  +A++ + I  +  
Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAKTREQFGQPIAQFQAVQFMLAEMEVAIQTSRL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  ++A   D+ +         R MA + KY   +M   V  +A++  GG GY+++  + 
Sbjct: 299 LWQKVAWMVDQGQD-------VRRMASVAKYHATEMLSQVADKAVQVAGGMGYMKDSPVE 351

Query: 432 RHYRE 436
           R YR+
Sbjct: 352 RFYRD 356


>gi|307293077|ref|ZP_07572923.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881143|gb|EFN12359.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 384

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 33/279 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    ++W PK  + E            ++A   GLTE   G+D A++ +   K  D  Y
Sbjct: 100 TEEQKREWLPKFATGE------------AIA-SFGLTEPEAGSDAASLRTVAIKDGDN-Y 145

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K +++ +P +  F ++A+ E  V G   +   +   +  G+ + +   K+G + +
Sbjct: 146 RITGTKRYITNAPRASVFTLMARTEPDVKGAAGISAFILPANTPGISFGKPDKKMGQKGS 205

Query: 285 ATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
            T ++   +    ++   N+  G P    K  +  LD   + ++ + + + +     ++ 
Sbjct: 206 LTTDVILDDV---VVPAKNIIGGVPGRGFKTAMKVLDRGRIHIAAVSLGMCQRLIDMSLQ 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + D  +++  +AD+ +D+  A AL   +A  FD  +  S E A      
Sbjct: 263 YALERKQFGQRIADFQLIQGMLADMKVDMLTAEALMQSVAAKFDAGEPVSLECA------ 316

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              KY+  +    +   A++  GG+GY+ E  + R YR+
Sbjct: 317 -ALKYYASEAVGRIADRAVQIHGGAGYMAEYKVERFYRD 354


>gi|84501724|ref|ZP_00999896.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84390345|gb|EAQ02904.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRV 253
           + + +TE   G+D+AAI ++ +   D  Y L+G K ++S+  + D F++ A+     GR+
Sbjct: 124 MAIAMTEPDTGSDLAAIRTRAEDRGDH-YLLNGSKTYISNGVIGDLFVVAARTGEKRGRI 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
           G F+V   +E     G    R   K+G     T E+ F +       LLGD  +    + 
Sbjct: 183 GLFVVMAGME-----GFSLGRHLKKMGLPVQDTAEIRFDDVRVPKENLLGDPGMGFAYMA 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   +    SAI S+S  + +    + + + R   G  +      +  +AD+   + AA 
Sbjct: 238 ECLAVERTMSAISSLSHAQAAFDITLEFVKERRAFGKPVGAFQNTRFVMADLRARLDAAQ 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   +     ++ +   E+AA A+++       C ++   V+   ++  GG+GY++E  I
Sbjct: 298 AYLDQCVVLANDERLTPEDAAAAKLL-------CSEVQGDVVDAGLQLHGGAGYMDEYEI 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           +  +R++    I  G+   M
Sbjct: 351 SHMFRDARIARIYAGTSEIM 370


>gi|227485266|ref|ZP_03915582.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236726|gb|EEI86741.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 378

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 40/273 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
             LTE   GTD     + GQK   + DG  Y L+G K F+++   +D +++ A  +   G
Sbjct: 122 FALTEPDAGTD-----ASGQKTVAVKDGDEYVLNGSKIFITNAGHADTYVVFAMTDKSQG 176

Query: 255 CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
              +   ++E G+P G  +   ++K+G ++++T+EL F +       LLG         E
Sbjct: 177 TKGISAFIVEKGTP-GFNFGAKEDKMGIKASSTMELVFQDCRIPAANLLG---------E 226

Query: 311 DMKILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           + K   Y    LD   + ++   + +AE     AI Y + R   G  +      +  +A+
Sbjct: 227 EGKGFKYAMQTLDGGRIGIAAQALGIAEGALNKAIKYVKERQQFGRPIAKFQNTQFKLAE 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+DI +A  L ++ A   D  +S +       + A   K    ++A  V  +A++  GG
Sbjct: 287 MAIDIESARHLVYKAATLKDAGESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GY +E  + R  R++    I  G+   M++ V
Sbjct: 340 YGYSKEYEVERMMRDAKITEIYEGTSEVMLMVV 372


>gi|224056002|ref|XP_002197059.1| PREDICTED: acyl-Coenzyme A dehydrogenase, long chain [Taeniopygia
           guttata]
          Length = 431

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 40/270 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC 255
           + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++A    E R   
Sbjct: 171 IAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKVFITNGWMSDVVIVVAVTNREARSPA 228

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGD 301
             +   L +    G    R   KIG ++  T EL F +               F +L+ +
Sbjct: 229 HGISLFLVENGTKGFIKGRKLQKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAE 288

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L     P E + I      A M+++       E  +Y R+R   G  +     ++  +A+
Sbjct: 289 L-----PQERLLI------ADMALASCEFMFEETRNYVRQRKAFGKTIAHLQTVQHKLAE 337

Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           I   I    A    + N     A  R + A      A + KYWC  +  +V  + ++  G
Sbjct: 338 IKTQICVGRAF---MDNCLQLHADKRLDSAT-----ASMAKYWCSDLQNSVATQCVQMHG 389

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  IA+ + ++    I  G+   M
Sbjct: 390 GWGYMWEYPIAKAFVDARVQPIYGGTNEIM 419


>gi|121638599|ref|YP_978823.1| putative acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224991091|ref|YP_002645780.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121494247|emb|CAL72725.1| Probable acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224774206|dbj|BAH27012.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|239831903|ref|ZP_04680232.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824170|gb|EEQ95738.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+  +    +   LL +++   GP       
Sbjct: 194 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMNGVEVSEDALLPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE   +  R++       D+P     + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|187927215|ref|YP_001897702.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|241661736|ref|YP_002980096.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|309780086|ref|ZP_07674838.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724105|gb|ACD25270.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240863763|gb|ACS61424.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|308921118|gb|EFP66763.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 385

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 27/321 (8%)

Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y MA  E  GH+    V  A  V   M TP +      +  S E      AP        
Sbjct: 67  YAMAMAETLGHIHCGGVPMAIGVQTDMATPAL-----ARFGSDELRAQFLAPAISGDAVA 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            +G++E   G+D+A+I +  +K  D  Y ++G K W  +S  +D   +LA          
Sbjct: 122 CVGVSEPSAGSDVASIKTTARKDGDD-YIINGSKMWITNSLQADWMCLLANTSDDPAHRN 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++   +  G+   +   KIG  S+ T  + F +      + +G+     G     ++
Sbjct: 181 KSLIIVPMNTKGVSVGKKIRKIGMNSSDTGLIYFDDVRVPQRYRIGE----EGKGFTYQM 236

Query: 315 LIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L +    L +A  S++ M + +     YAR R + G  L+D   +   +A++  ++ A  
Sbjct: 237 LQFQEERLWAAASSLATMTMCIETTAEYARERKLFGASLLDNQWVHFKLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R  + + + +  +E A+ A++ A        ++A  V    ++  GG G+  +  +
Sbjct: 297 ALTYRACDLYIQGQDVTELASMAKLKAG-------RLARIVPDACLQFWGGMGFTWDNPV 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R+YR+    SI  G+   M+
Sbjct: 350 SRYYRDGRLGSIGGGADEVML 370


>gi|66814650|ref|XP_641504.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium
           discoideum AX4]
 gi|60469536|gb|EAL67527.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium
           discoideum AX4]
          Length = 415

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +K ++G + L+G+K W  + P ++  ++ A+ +   G   +
Sbjct: 156 LAMSEPNAGSDVVSMKTNAKK-TEGGWLLNGNKMWITNGPDANVLVVYAKTDINAGSKGI 214

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F + F   + D NV       +K+L+  
Sbjct: 215 TAFLIEKEMKGFSTGQKLDKLGMRGSNTCELVFEDCF---VPDENVLGTVGGGVKVLMSG 271

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +S      M+  +   + Y  +R   G  + +  +M+  +AD+   + A+ + 
Sbjct: 272 LDYERLVLSAGPLGIMQACMDNVVPYLHQREQFGKPIGEFQLMQGKVADMYTLLNASRSY 331

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D   +  ++ A A I+      +  + A  +  +A++ +GG+GYI E    R
Sbjct: 332 VYSVAKSADAGYTSRKDCA-AVIL------YTAENATQMALQAIQTLGGNGYINEFPTGR 384

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 385 LLRDAKLYEIGAGT 398


>gi|313240936|emb|CBY33220.1| unnamed protein product [Oikopleura dioica]
          Length = 411

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-CFL 257
           L ++E   G+D+ ++  +  K  D  + L+G K W  + P +D  I+ A+ +        
Sbjct: 151 LAMSETGSGSDVMSMKIRADKKGDH-WILNGTKMWITNGPTADTMIIYARTDQDCKPAHG 209

Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   + DG+ +G  C QRL +K+G R + T EL F N     + + N+  G  +   +L+
Sbjct: 210 ITAFIVDGNADGFHCAQRL-DKLGMRGSPTGELVFENV---AVHEDNILGGIGQGAYVLM 265

Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+   + +SG  V L +A     I YA  R   G  + +  +++  IAD+   ++A+ 
Sbjct: 266 SGLNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLIQGKIADMYTTLSASR 325

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  +++A + D     + + A   +       +  + A  V  +A++ +GG+GYI +   
Sbjct: 326 SYLYQVARAADNGHFNNADCAGIIL-------YTAEKATQVCLDAIQILGGNGYINDYPT 378

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 379 GRFLRDAKLYEIGAGT 394


>gi|300313969|ref|YP_003778061.1| isovaleryl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300076754|gb|ADJ66153.1| isovaleryl-CoA dehydrogenase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGPDADVLVVYAKTDLEAGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F +     + + NV  G    + +L+  
Sbjct: 188 TAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDC---EVPEENVLGGVGRGVNVLMSG 244

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG     M+  +   + Y   R   G  + +  +M+  +AD+   + A  A 
Sbjct: 245 LDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMACKAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D A S  +  A  +  A    Y   + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 VYAVGQACDRADSADKVRALRKDAAGAILY-SAEKATWMAGEAIQSLGGNGYINEYPVGR 363

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 364 LWRDAKLYEIGAGT 377


>gi|108801042|ref|YP_641239.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870184|ref|YP_940136.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436879|ref|YP_001072570.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771461|gb|ABG10183.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696273|gb|ABL93346.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236679|gb|ABO00080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 57/306 (18%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +T     + W P I S E             + I + +TE   G+D+A I +   +  D 
Sbjct: 102 LTNDEQKQRWMPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD 148

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + ++G K F+SS ++ D  +++A+ +   G      F+V R +E     G    R  +K
Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERGME-----GFTRGRKLDK 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329
           +G  S  T EL F N       LLG         ++  P E + I      AI +++G R
Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAK 384
               E + Y + R   G     QP+      +  +A++  ++        R      + +
Sbjct: 257 AVFDETLQYCKDRKAFG-----QPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGE 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EAA A       K+W  + A  ++   ++  GG GY+ E  +AR Y +    +I  
Sbjct: 312 LTAVEAAKA-------KWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFG 364

Query: 445 GSGNAM 450
           G+   M
Sbjct: 365 GTTEIM 370


>gi|226364143|ref|YP_002781925.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242632|dbj|BAH52980.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 16/262 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE   G+DIA++ +  ++  DG + LSG K ++S+   +D  ++ A+ +   G   
Sbjct: 120 GFALTEPDAGSDIASMRTTARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F++P+    G+P G+ Y   ++K+G RS  T  +   +    L  D  V T      
Sbjct: 179 ITAFVLPQ----GTP-GVSYSEPQDKLGIRSAPTYTVYLDDVV--LPHDAVVGTEGRGGN 231

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L+ A + V+ M   +A       R + +       P+ +     + L    A  +
Sbjct: 232 IALTALNRARIDVAAMANGIALRAWELGRSYAAERKQFGHPIAEFQAIQLLLGACDAQLV 291

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S R+  + D A    +  A  R  A ++KY   +   +++ + ++  GG+G++ E  I R
Sbjct: 292 SSRV--TADWAADVKDTGADLRRAASVSKYVATEACFSIVDQTVQIHGGAGFMRESEIER 349

Query: 433 HYRESPANSILLGSGNAMVLDV 454
            YR+     I  G+    +L +
Sbjct: 350 LYRDCRILRIFEGTSQIQLLTI 371


>gi|226309268|ref|YP_002769228.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188385|dbj|BAH36489.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 611

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 74/327 (22%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA + F R +  T             + LTE   G+D+ A  ++     DG + + G
Sbjct: 146 QKHWAKEGFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEG 192

Query: 231 HKWFLSS-PMSDA-----FIMLAQVEGR------VGCFLVPR------LLEDGSPNGLCY 272
            K F+S   + D       ++LA+ EG       +  F VP+       LE G  NG+  
Sbjct: 193 VKRFISGGDVGDTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSDTLELGERNGVYV 252

Query: 273 QRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP----VEDMKILIYLDSAIMS 324
             +++K+G +S+ T EL F  T     G+L+GD++         +E+ ++++       +
Sbjct: 253 TGVEHKMGLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMV----GTKA 308

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATA 371
              +      A+ YA+ R + G  L +              P ++R++A     +  A A
Sbjct: 309 TGTLSTGYLNALEYAKER-IQGADLTELTNKTAPRVAITHHPDVRRSLA-----MQKAYA 362

Query: 372 LSFRLANSFDEAKSRSEEAAY---------ARI---MAPITKYWCCKMAPAVIAEAMECI 419
              R    +  A   ++ A           AR+   + PI K    + A  ++ E+++ +
Sbjct: 363 EGLRAVYLYTAAHQNADVAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTL 422

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GGSGY+++  I ++ R++  +++  G+
Sbjct: 423 GGSGYLQDYPIEQYIRDAKIDTLYEGT 449


>gi|118589277|ref|ZP_01546683.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM
           12614]
 gi|118437977|gb|EAV44612.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM
           12614]
          Length = 593

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 36/291 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  I +         A
Sbjct: 160 MNLTEPQAGSDLNALKAKAERRDDGTYRIFGQKIFITYGDHDLTDNIIHMVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
             +G +  FLVP+ L  +DGS    N +    +++K+G   + T  + + +     G+L+
Sbjct: 220 GTKG-ISLFLVPKFLVNDDGSLGERNDVKVGGVEHKMGIHGSPTCTMVYGDEGGAIGWLV 278

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------VSGGI--LI 350
           G+ N     +  M     L   I  +     +   A+ YA  R           G+  + 
Sbjct: 279 GEENRGLACMFTMMNNARLAVGIQGLGVAERAYQHALAYALERKQGRAPGDTGEGMSPIA 338

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWC 404
             P +KR +  +      A A+ +  A++ D +K   +EA        A ++ PI K   
Sbjct: 339 RHPDIKRMLLGMKARTQVARAICYACAHAIDMSKIAEDEAGKTFWSERASLLTPIAKALP 398

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 V +  ++  GG G+IEE   A+H R++    I  G+     +D++
Sbjct: 399 TDFGVEVASLGIQIHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQSIDLV 449


>gi|332262576|ref|XP_003280338.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Nomascus leucogenys]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP         GL   + ++K+G R ++T  L F +     +   ++   P    
Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+     A++YA  R   G  L    V++  +AD+AL +
Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMALAL 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY+ 
Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 371 EMPAERHYRDARITEIYEGT 390


>gi|260558135|ref|ZP_05830345.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408408|gb|EEX01716.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 407

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 324 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397


>gi|226361779|ref|YP_002779557.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240264|dbj|BAH50612.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 384

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 18/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           + +TE   G+D+  I +   +  D  Y ++G K F+S+   +D  +++A+ +   G  G 
Sbjct: 128 VAMTEPGAGSDLKNIKTTALRDGDH-YVINGAKTFISNGSQADLIVVVAKTDPAAGAKGV 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVED 311
            L+  ++E     G    R+ +K+G     T EL F +        L G+     G +  
Sbjct: 187 SLI--VVETAEAPGFTRGRILDKVGQHGADTSELSFEDVRVPVANLLGGEEGRGFGQLMT 244

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L   + +V+ M  ++ E + Y + R   G  + D    K  +A+      AA  
Sbjct: 245 QLAQERLLIGVTAVATMEAAVTETVEYTKSRSAFGQSIFDFQNTKFVLAECQTVAHAARV 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                    D    R          A + K+W  +    VI   ++  GG GY+ E  IA
Sbjct: 305 F-------IDSCIERHLRGNLDTTTAAMAKWWLTEQQCQVIDRCVQLFGGYGYMREYPIA 357

Query: 432 RHYRESPANSILLGSGNAM 450
           R Y ++    I  GS   M
Sbjct: 358 RMYADARVQKIYGGSNEIM 376


>gi|31793896|ref|NP_856389.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium bovis AF2122/97]
 gi|31619490|emb|CAD94928.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium bovis
           AF2122/97]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|302344677|ref|YP_003809206.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641290|gb|ADK86612.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 11/269 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           LGLTE   G+D  +I ++  +  D  Y L+G K F+++ P++D  ++ A+ +   G F +
Sbjct: 123 LGLTEPNAGSDAMSIATRATRQGDH-YVLNGSKMFITNGPIADVVLVYAKTDPAAGPFGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315
              + +    G    R   K G+R + T EL F N       L+G+ N     V     +
Sbjct: 182 SAFIVETKWPGFSVSRKLKKAGHRGSPTGELRFDNLEAPAENLVGEENGGIAVVMRGLDI 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A   V   R ++  ++ YA+ R   G  +    +++  +A++     AA  +++ 
Sbjct: 242 ERVVCAAGCVGICRQAIDLSLKYAKEREQFGRPIAKFQMIQAKLAEMYALYEAAKNMTYA 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   ++++   +     R MA     +  + A  V +EA++  GG GY  E ++ R +R
Sbjct: 302 AAVMAEQSQRGGKGTELTR-MAAAAVMFSAEAATKVASEAVQIHGGYGYCLEYAVQRLWR 360

Query: 436 ESPANSILLGSGNAMVLDVL---NLLEKG 461
           +  A    +G+G   +  ++    LL++G
Sbjct: 361 D--AKLFEIGAGTTEIRKLIIARELLQRG 387


>gi|229491731|ref|ZP_04385552.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321412|gb|EEN87212.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 611

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 74/327 (22%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA + F R +  T             + LTE   G+D+ A  ++     DG + + G
Sbjct: 146 QKHWAKEGFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEG 192

Query: 231 HKWFLSS-----PMSDAF-IMLAQVEGR------VGCFLVPR------LLEDGSPNGLCY 272
            K F+S         + F ++LA+ EG       +  F VP+       LE G  NG+  
Sbjct: 193 VKRFISGGDVGGTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSETLELGERNGVYV 252

Query: 273 QRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP----VEDMKILIYLDSAIMS 324
             +++K+G +S+ T EL F  T     G+L+GD++         +E+ ++++       +
Sbjct: 253 TGVEHKMGLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMV----GTKA 308

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATA 371
              +      A+ YA+ R + G  L +              P ++R++A     +  A A
Sbjct: 309 TGTLSTGYLNALQYAKER-IQGADLTELTNKTAPRVAITHHPDVRRSLA-----MQKAYA 362

Query: 372 LSFRLANSFDEAKSRSEEAAY---------ARI---MAPITKYWCCKMAPAVIAEAMECI 419
              R    +  A   ++ A           AR+   + PI K    + A  ++ E+++ +
Sbjct: 363 EGLRAVYLYTAAHQNADVAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTL 422

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GGSGY+++  I ++ R++  +++  G+
Sbjct: 423 GGSGYLQDYPIEQYIRDAKIDTLYEGT 449


>gi|215482249|ref|YP_002324431.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|301345865|ref|ZP_07226606.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301512721|ref|ZP_07237958.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596581|ref|ZP_07241589.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|213985921|gb|ACJ56220.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
          Length = 387

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 304 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377


>gi|28211702|ref|NP_782646.1| butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204144|gb|AAO36583.1| butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 392

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 19/269 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A+  ++  K  D  Y L+G K F+++   +  +I+    +   G   +
Sbjct: 134 FALTEPNAGTDSASQNTKAIKQGDN-YILNGQKCFITNGGEAGVYIVFGMTDKSKGTRGI 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    + +NK+G R+++T EL F N    ++   N+        KI +  
Sbjct: 193 TGFIIEKDHPGFYIGKKENKMGIRASSTSELIFKNC---VIPKENMIGKEGRGFKIAMQA 249

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   ++++   V +A+      + Y + R   G  L     ++  +AD+   I A+  L
Sbjct: 250 LDGGRIAMASQAVGIAQGAMDRTVDYLKEREQFGRPLSSFQGLQWMLADMETRINASRLL 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A  FD  ++ +++AA A++ A  T       A  V  +A++  GG GY+++  + R
Sbjct: 310 VQKAAVKFDNGENVNKDAAMAKLFAAET-------AMDVTIKAVQLHGGYGYMKDYPLER 362

Query: 433 HYRESPANSILLGSGNAMVLDV-LNLLEK 460
             R++    I  G+     + +  N+L+K
Sbjct: 363 MMRDAKITEIYEGTSEVQKMVISKNILDK 391


>gi|28211699|ref|NP_782643.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204141|gb|AAO36580.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 20/256 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF 256
           G GLTE   GTD      Q   + DG  Y L+G K F + SP++D F++ A  +   G  
Sbjct: 137 GFGLTEPNAGTDAGG--QQTTAVLDGDHYILNGEKKFTTNSPVADIFVVFAMTDKEKGPK 194

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + + S  G    +L++ +G R+    E  + +     +   N+     +  KI +
Sbjct: 195 GISAFIVEKSFPGFSIGKLEDTMGLRAAKVAETIYKDC---KVPKENLLGKEGDGFKIAM 251

Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + V+   + +A+     A  Y   R   G  L     ++  +AD+ L I  A 
Sbjct: 252 QTLDGGRIGVAAQALGIAQGAFEKAKKYMMERKQFGKALCKFQGLQWMMADMDLKIEQAR 311

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A   D     S  AA A++ A          A  V  EA++  GG GYI++  +
Sbjct: 312 YLVYKAAWEKDNGLPYSLSAARAKLAA-------TDAAMFVTTEAVQLFGGYGYIKDYPV 364

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 365 ERMMRDAKITQIYEGT 380


>gi|308274691|emb|CBX31290.1| Acyl-CoA dehydrogenase, short-chain specific [uncultured
           Desulfobacterium sp.]
          Length = 384

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML------AQVEGR 252
             +TE + G+D   ++ +   + DG  Y L+G K F+++  +    ++      A+    
Sbjct: 123 FAMTEPQAGSD--PVSQKTSAVKDGEYYVLNGTKRFITTGKNAGLTIVTAITDSAKKHKG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+V +     +P GL   ++++K+G R + T +L F N       DL  S G  +  
Sbjct: 181 ISAFIVVK----DTP-GLIVGKVEDKMGLRGSDTCDLVFDNC-RVHKDDLLGSEG--DGF 232

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   V +A+A     + Y+ +R   G  +     ++  +A++A ++
Sbjct: 233 KIAMSALDGGRIGIAAQSVGVAQAALDAAVKYSTQREQFGQTISKFQGLRWMVAEMATEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L F  A   D+  + + +A+ A++ A        +M   V A+A++  GG G+I+
Sbjct: 293 EAARQLMFSAAAMKDKGVNYTLQASMAKLFAS-------EMVNRVTAKALQMHGGYGFIK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R YR++   +I  G+
Sbjct: 346 EYPVERFYRDARVFTIYEGT 365


>gi|260553738|ref|ZP_05826009.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405138|gb|EEW98637.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 18/243 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLV 258
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  F ++A+    + G   +
Sbjct: 124 LTEPDAGSDAASLKTTA--VKDGEFYILNGTKRFITNAPHAGVFTVMARTNSDIKGAGGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L
Sbjct: 182 SAFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A +SV      L ++++YA  R   G  + +  +++  +AD   +I AA  + 
Sbjct: 241 DKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMV 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +I R 
Sbjct: 301 LDAARLRDAGQNVSTEASCAKMFAT-------EMCGRVADRCVQIHGGAGYISEYAIERF 353

Query: 434 YRE 436
           YR+
Sbjct: 354 YRD 356


>gi|119504801|ref|ZP_01626879.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459406|gb|EAW40503.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2080]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 38/266 (14%)

Query: 190 PMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-- 246
           P+    +   +GLTE    G+D   + S+G+ +    + ++G KWF S     AF  +  
Sbjct: 110 PLVAGDIYPSVGLTEPDVAGSDPTLMQSRGE-LDGNEWLINGRKWFTSGANVAAFTTVFC 168

Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
                 Q  G+    +VP      +  G   +R+   +G+      ELE  +     G L
Sbjct: 169 ETEPEQQRHGKFSAIIVPT-----NTPGYRIKRVVKTMGDTVGGHCELELDHVRVPAGNL 223

Query: 299 LGDLNVS-------TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           LG+            GP      + +L  A  +   M        +YA +R+  G +L +
Sbjct: 224 LGERGKGFTIAQKRLGPGRIFHCMRWLGQAQRAFELM-------CNYAGKRYAHGSLLSE 276

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  ++R IA+ A +I AA  ++   A   D           AR+   + K+W  +M   V
Sbjct: 277 KGEIQRYIAESAAEIQAARLMTLDAARVMDSGDD-------ARVQIALIKFWGARMLHNV 329

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
           I  A++  G  G  E+  +   YRE+
Sbjct: 330 IDRAIQVHGALGVTEDTPLEFMYREA 355


>gi|160876083|ref|YP_001555399.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160861605|gb|ABX50139.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315268279|gb|ADT95132.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  + L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|163746739|ref|ZP_02154096.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161379853|gb|EDQ04265.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 16/265 (6%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P  ++  AI    LTE + G+D+A  T   +   +G Y L G K W  +  +++ + + A
Sbjct: 114 PKTRSGQAISAFALTEPQSGSDVANSTMTAKADGNG-YVLDGRKTWISNGGIANVYTVFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-FLLGDLNVST 306
           +     G   +   +      GL  +     +     AT+  +     G  LLG+     
Sbjct: 173 RTGEAPGAKGLSAFIVPADTPGLKVEERLEVMAPHPLATLHFDGVKLPGSALLGE--AGR 230

Query: 307 GPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M +L    S + + + G  R +L EA+     RHV G  L +  +++  IAD+A+
Sbjct: 231 GFAIAMSVLDVFRSTVAAAALGFARRALDEALARVTSRHVQGAPLSELQLVQGHIADMAV 290

Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           D+ AA  L +R A + D    R + EAA A++ A          A  VI  A++  GG G
Sbjct: 291 DVDAAALLVYRAAWTKDSGAPRVTREAAMAKLFA-------TDQAQKVIDTAVQLHGGDG 343

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
                ++ R YRE  A  I  G+ +
Sbjct: 344 VRHGEAVERLYREIRALRIYEGASD 368


>gi|86740254|ref|YP_480654.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567116|gb|ABD10925.1| Butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 387

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 26/269 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +   A   GL+E+  G+D AA+ ++  +  D  + LSG K W  ++ +S+ + +LA 
Sbjct: 118 PLARGEAAFSYGLSEREAGSDTAAMKTRAVRDGDH-WVLSGQKSWITNAGISEYYTVLAV 176

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
              +GR G  +   ++E   P G      + K+G + + T EL F +       L+G+L 
Sbjct: 177 TDPDGRRGANISAFIVESSDP-GFSVGSPEKKLGIKGSPTRELLFDDCRIPEDRLIGELG 235

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
                   +++ L  LD   +++    + +A+     A++Y + R   G  + D   ++ 
Sbjct: 236 ------HGLRLALRTLDHTRVTIGAQAIGIAQGALDLALNYVKERKQFGKRIADFQGIQF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ + AA  + +  A     AKS   +A          K      A  V  +A++
Sbjct: 290 MLADMAMALEAARQMVYVAA-----AKSERGDADLT-FFGAAAKCLASDTAMQVTTDAVQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
            +GG GY ++    R  R++    I  G+
Sbjct: 344 LLGGYGYTQDFPAERLMRDAKITQIYEGT 372


>gi|88801128|ref|ZP_01116673.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88776109|gb|EAR07339.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 391

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ ++  KI DG Y L+G K W  +SP++D F++ A+++G +  F++
Sbjct: 136 FGLTEPDSGSDPASMRTRA-KIVDGGYQLTGSKMWITNSPLADVFVVWAKLDGEIAGFIL 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +      GL   ++  K   R++ T E+     F      L  + G       L   
Sbjct: 195 ERGM-----TGLSTPKINGKFSLRASVTGEIVMDEVFVPEANRLPKAKGLSAPFGCLNKA 249

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++       A A +Y   R      L    ++++ +AD+  +IA     + ++
Sbjct: 250 RYGIAWGAMGAAECCFAAARNYTLERQQFNRPLAANQLIQKKLADMQTEIALGLQGALQM 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               D  +   E       +  + K   C  A  +     +  GG+G  +E  + RH
Sbjct: 310 GRMMDAGQCPVE-------LVSLMKRNNCGKALDIARTVRDMHGGNGISDEYPVIRH 359


>gi|319763616|ref|YP_004127553.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118177|gb|ADV00666.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVE------G 251
             LTE   G+D A++ +    I DG  Y ++G K F++ +P +  F ++A+        G
Sbjct: 122 FALTEPEAGSDAASLRTTA--IRDGDFYVVNGTKRFITNAPQAGMFTLMARTNPANKGAG 179

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            V  F+V    E G+P G+ + +   K+G +   T ++ F N       L+G L    G 
Sbjct: 180 GVSAFIV----EAGTP-GISFGKRDKKMGQKGAHTCDVIFENVRVPAANLIG-LKEGQGF 233

Query: 309 VEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              MK+L    I++ +  ++V+   + +A  + YA  R   G  + +  +++  +AD   
Sbjct: 234 KTAMKVLEKGRIHIAAVAVAVAERMLDMA--LRYAAERRQFGQPIGNFQLVQAMLADSKA 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  +    A   D+    S EA+ A       K +  +M   V   A++  GG+GY
Sbjct: 292 EIYAARCMVLDAARRRDDKLPNSTEASCA-------KMFATEMCGRVADRAVQIFGGAGY 344

Query: 425 IEERSIARHYRE 436
           + E +I R YR+
Sbjct: 345 MSEYAIERFYRD 356


>gi|291294664|ref|YP_003506062.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290469623|gb|ADD27042.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 24/266 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-----EGRVG 254
           GLTE   G+D AA+ ++ +      + L+G K F++   ++  +++ A+      E +  
Sbjct: 132 GLTEPGSGSDAAAMRTKAEDTGSS-WVLNGTKQFITQGSVAGVYVVNARTDAAPSEEKKH 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
             L   + E   P GL   R + K+G  ++ T ++ F +       LLG+     G  + 
Sbjct: 191 LGLSALVFEAPIP-GLRIGRKERKLGLNASDTAQIIFEDITLPKEALLGERG--RGFYDV 247

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M++L    +  A M+V   R +L  A  YA  R   G  + +   +   +AD+A  + AA
Sbjct: 248 MRVLEGGRIGIAAMAVGLGRAALEFATKYALEREQFGRPIAEFQAVSHKLADMATQLEAA 307

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A   D  K     AA A++ A       C        EA++ +GG GYI+E  
Sbjct: 308 RLLYLKAAELRDAGKPFGPAAAQAKLFASEVAVQACD-------EAIQILGGYGYIKEYP 360

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
           + R++R++    I  G G + VL V+
Sbjct: 361 VERYWRDARLTRI--GEGTSEVLKVI 384


>gi|218288739|ref|ZP_03493002.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241097|gb|EED08273.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 26/259 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQ 248
           P     + +   LTE   G+  A I +  ++  D  Y L+G KW  + S ++D F++  +
Sbjct: 108 PFVAGDIRVTFTLTEPNSGSG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLFCR 165

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +EG  G       LVPR        GL  + +   +G    A   L   +    +   L 
Sbjct: 166 LEGTSGGEGTLALLVPR-----DAPGLTIELMAPAMGIAGTAHGHLRLRDCRVPVANRLG 220

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI---- 359
              G   ++    +LD +  ++    V  AE        H    +   QP+ KR I    
Sbjct: 221 -EEGDGLEVAFRGFLDPSRTAIGMTCVGAAERALELAANHALRRVTFGQPLAKRQIIQMW 279

Query: 360 -ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A++A DI AA  L    A  FDE    + EAA A++ A        +M   V  +A++ 
Sbjct: 280 LAEMATDIEAARQLVLHAARRFDEGHPITVEAAMAKMFA-------TEMLQRVTDKALQI 332

Query: 419 IGGSGYIEERSIARHYRES 437
            GG GY +   I R YR++
Sbjct: 333 HGGPGYFKSSEIERIYRDA 351


>gi|325673562|ref|ZP_08153253.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555583|gb|EGD25254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 405

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA++++  +  D  Y L+G K F+S +  SD ++++A+        +  F
Sbjct: 146 LTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSDVYVVMARTGAAGARGISAF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP+        GL +   + K+G  +  T ++         +   N+  G  E  +I +
Sbjct: 205 IVPK-----DTPGLSFGANEKKMGWNAQPTRQVILDQV---RVPAANLLGGEGEGFRIAM 256

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L+ A  SV G + +L +A+ Y   R   G  L++   ++  +AD+ +++ AA 
Sbjct: 257 KGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFRLADMRIELEAAR 316

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +R A++ D   +   E      +  + K +       V  EA++  GG GY+ E  +
Sbjct: 317 TLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQLHGGYGYLAEYGL 370

Query: 431 ARHYRESPANSILLGSGNAM 450
            +  R+   + IL G+   M
Sbjct: 371 EKIVRDLRVHQILEGTNEIM 390


>gi|315095162|gb|EFT67138.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL060PA1]
          Length = 382

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  + ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|298714025|emb|CBJ27257.1| isovaleryl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 441

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 33/261 (12%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDA------FIMLA 247
           S   G+ ++E   GTD+  +T++     DG+ + + G K ++++  +D       F++ A
Sbjct: 167 STIAGMCMSEPGAGTDVLGMTTKAVPSPDGLSFKIDGAKMWITNGTTDGLTTGDVFLVYA 226

Query: 248 QV-EGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +   GR  +  F+V    E G P     Q+++ K G R++ T EL F         L+GD
Sbjct: 227 RTGPGRQDISMFIV----EKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGD 282

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----EAIH-YARRRHVSGGILIDQPVMK 356
            N +      + ++  L+   ++++ M V +A    EA++ Y + R   G  +     ++
Sbjct: 283 ENGAM-----LCMMRNLEIERVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQ 337

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IAD   +  A     + +A + D + + +       + A  TK +C  MA  V   AM
Sbjct: 338 KHIADSYAEYMAGKHYLYAVAANLDLSSTGNG------LDADGTKLYCTTMAKNVADRAM 391

Query: 417 ECIGGSGYIEERSIARHYRES 437
           + +GG GY +E  I R +R++
Sbjct: 392 QVLGGYGYCDEYQIERLWRDA 412


>gi|39936511|ref|NP_948787.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39650367|emb|CAE28889.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 385

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 22/262 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L
Sbjct: 128 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTL 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           + +    GL +   + K+G  +  T  + F N        LGD  +        KI +  
Sbjct: 187 VVEKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 240

Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L+    S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L
Sbjct: 241 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A + D       + A A  +  + K +       V  EA++  GG GY+ E  I +
Sbjct: 301 LWRAAAALDR------KDADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEK 354

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R+   + IL G+   M L V
Sbjct: 355 LVRDLRVHQILEGTNEIMRLIV 376


>gi|327310601|ref|YP_004337498.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326947080|gb|AEA12186.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 410

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 29/274 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +        +TE   G+D+A I ++ +K  D  + ++G K F+SS  ++D F++LA+
Sbjct: 122 PIARGEKLGAFAVTEPCCGSDVAGIQTRAEKKGDR-WIINGRKAFISSSDVADYFVVLAR 180

Query: 249 V----EGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                + R     L   ++E G+P G   ++  +K+G   +   EL F N     + D N
Sbjct: 181 TYPPPDKRTRYLGLTFFIVEKGTP-GFKVEQCYHKMGLHGDNACELVFENV---EVPDEN 236

Query: 304 VSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
              G  E+    IY     D   + V+   V +A+     A  Y  +R   G  +     
Sbjct: 237 -RVG--EEGMGFIYAMETFDRTRIGVAAQAVGMAQGAFEKAFQYVHQRQAFGVPVAYFQA 293

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++ ++ D+A  + +A  L++  A   DE +           +A + K++  + A  +I+E
Sbjct: 294 IQFSLMDMAAKLMSARLLTYLAAKLADEGRKEF------TFVASLAKFYATEAAEEIISE 347

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A+   GG G I E  I R  R+     I  G+ N
Sbjct: 348 AINLHGGVGVIVETGIERFLRDVKITQIYEGANN 381


>gi|323487520|ref|ZP_08092814.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
 gi|323399202|gb|EGA91606.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
          Length = 379

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 22/281 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K        LTE   G+D A   +  +K  D  Y ++G K F+++ P+ D  ++ A 
Sbjct: 111 PVMKGEKEGTFALTEPSAGSDAATQNTIARKDGD-YYIINGRKAFITAAPLCDFAVVFAA 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +  +G   +   + +    G    + + K+G   + T ++   N       +LG+    
Sbjct: 170 TDVSLGARGITAFIIERDTPGYSVGQPERKMGVNGSPTADIILENVKVHKSQILGE---- 225

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            G    M +   LDS  + V+   + +AEA     + Y R+R   G  L +   ++  +A
Sbjct: 226 EGKAFQMAMKT-LDSGRLVVAAQCLGIAEAAMKEAVGYVRQRRQFGAALSEFQGIQFMLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A AL +  A   D   + ++EAA A       KY+  +M   + A+A++  G
Sbjct: 285 DMETKLCCARALIYDAAEKKDAGMNITKEAAAA-------KYFASEMCNEIAAKALQLHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             GY+++  I R +R++   +I  G+   +   +   + KG
Sbjct: 338 AYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQVLKG 378


>gi|6959522|gb|AAF33139.1|AF196567_15 putative acyl-CoA dehydrogenase [Pseudomonas stutzeri]
          Length = 513

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 43/291 (14%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE 250
           +  + + + ++E   G+D   I +  ++  DG  + L+G K F+S + ++ A+I+ A+ E
Sbjct: 248 RGDIHVSVAMSEPEAGSDANGIRTAVKR--DGCEWILNGSKHFISDADIASAYIVTARSE 305

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296
             + CFLV     D    GL    ++  +G+R      L F++                 
Sbjct: 306 EGISCFLV-----DRDTPGLELGPIQEMMGHRGTHQHGLFFTDCRIAPQQLLGEPGRGMS 360

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVM 355
            +LG LNV+         L Y+ +  +   GM   L E ++ +A++R   G  +    ++
Sbjct: 361 LVLGHLNVAR--------LAYVGARAV---GMASKLLEMSVDFAKQRSQFGAPIGSFQMV 409

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +I  A  +    A   D+ +   E+ +  ++ A        +M   V   A
Sbjct: 410 QKMLADMQCEIYGARMMLLNAAWEIDQGRDVREKVSMVKLFAS-------EMLGRVADSA 462

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDVLNLLEKGTNLF 465
           ++  GG GY  E  I R+YR++    +  G+     ++    LLE+G +L 
Sbjct: 463 VQIFGGMGYCTELPIERYYRDARVFRLYDGTSEIHRIMIARRLLERGISLL 513


>gi|85106801|ref|XP_962250.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|28923851|gb|EAA33014.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 433

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 30/298 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   ++Y      P   T+      L+E   G+D  A+ ++  +  +G Y ++G K 
Sbjct: 151 WGSEALKKKY-----LPKLATNTVGSFCLSEPVSGSDAFALATRAVETENG-YKINGSKM 204

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF- 291
           W  +S  +D FI+ A V+   G   +   + +    G    + + K+G ++++T  L F 
Sbjct: 205 WITNSMEADFFIVFANVDPSKGYRGITAFIVEKGMKGFSIAKKEKKLGIKASSTCVLNFD 264

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHV 344
                  N  G +      + G + + +I I        ++G+ +   E A+ Y      
Sbjct: 265 DVEVPKENILGKVGEGYKYAIGILNEGRIGIG-----AQMTGLALGAWENAVKYVWNDRK 319

Query: 345 SGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKY 402
             G L+ +   M+  IA    +IAAA AL +  A        R +EA    +M A + K 
Sbjct: 320 QFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAA--------RKKEAGEDFVMDAAMAKL 371

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 372 YASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKTLQK 429


>gi|224369392|ref|YP_002603556.1| Acd8 [Desulfobacterium autotrophicum HRM2]
 gi|223692109|gb|ACN15392.1| Acd8 [Desulfobacterium autotrophicum HRM2]
          Length = 414

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 21/277 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQ 248
           P+ K  +     LTE RGG+D    T+  + + D  + L+G K F+     +D F++ A+
Sbjct: 115 PLLKGEIFAAECLTEPRGGSDFFGTTTTARDMGDH-FLLNGQKRFIVGGEGADYFLVYAR 173

Query: 249 ----VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
               VE R G  CF+V R        G+  Q L   +G R      + F +       L+
Sbjct: 174 TDTDVEPRNGISCFIVDR------QEGVETQYLYGLMGCRGGGAARMVFKDVKVPRYNLV 227

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+LN        M I   L +A M++     ++  A  Y  +R   G  +     +   +
Sbjct: 228 GELNQGVKIFNTMMIPERLGTAAMTIGAAAPAVDVATGYTSKRKAFGKPVAAFQGVSFQV 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+    + AA A+ +  A + D    +  E    R+++  +K +  +     +  AM+ +
Sbjct: 288 AEAVTLLDAARAMIYTTARAVD---GKIYEKKIRRLVSQ-SKKFVTESCQKAVHNAMQVM 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY     + R +R+    SI  G+   M + + N
Sbjct: 344 GGIGYTNIYPVERIFRDLRLASIWTGTNEVMSMIIAN 380


>gi|52080517|ref|YP_079308.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52785896|ref|YP_091725.1| YngJ [Bacillus licheniformis ATCC 14580]
 gi|319645521|ref|ZP_07999753.1| YngJ protein [Bacillus sp. BT1B_CT2]
 gi|52003728|gb|AAU23670.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52348398|gb|AAU41032.1| YngJ [Bacillus licheniformis ATCC 14580]
 gi|317392407|gb|EFV73202.1| YngJ protein [Bacillus sp. BT1B_CT2]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 22/267 (8%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG- 251
           T  A+G  GLTE   G+D     ++ +   D  Y +SG K ++++      +++  V G 
Sbjct: 116 TGRALGAFGLTEPNAGSDAGGTRTKARSEGDS-YVISGEKCWITNAGFARTVIVTAVTGI 174

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G  ++  ++      G   +   +K+G R + T +L   N     +   N+   P +
Sbjct: 175 DDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNV---RVPKQNLLGSPEK 231

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K  L  LD   +S++ + V +A+     A+ YAR R   G  +     ++  +AD+A+
Sbjct: 232 GFKQFLNTLDGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAM 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  +  + A   D+ +  ++EAA+A++ A    +  C        ++++  GG GY
Sbjct: 292 EIELARNMVLKAAWLKDQGRPFTKEAAFAKLYASEMAFRTCN-------QSIQIHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           ++E  + R  R+  A  + +G G + +
Sbjct: 345 MKEYGVERMLRD--AKLMEIGEGTSEI 369


>gi|328883616|emb|CCA56855.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 609

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 141/313 (45%), Gaps = 53/313 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           Y+  N+A  +   +A+       + LTE   G+D+ A  ++  +  DG + + G K F++
Sbjct: 139 YNEGNEAQKKVAQIAVEKRWGSTMVLTEPDAGSDVGAGRTKATQQEDGSWHIEGVKRFIT 198

Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S   D        +LA+ EG       +  FLVP+   D      G+ NG+    +++K+
Sbjct: 199 SGEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYEFDWETGELGARNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333
           G +++ T E+ F +     G+L+GD +     +  M ++I     ++   ++S +     
Sbjct: 259 GLKASNTCEMTFGDKHPAKGWLIGDKHDG---IRQMFLIIEFARMMVGTKAISTLSTGYL 315

Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380
            A+ YA+ R V G  L +              P ++R++           +L    A+  
Sbjct: 316 NALEYAKER-VQGTDLANFMDKAAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQ 374

Query: 381 DEA--KSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           DE   K  + E A A      ++ PI K +  +     +A++++  GGSG+++E  I ++
Sbjct: 375 DEIAIKEAAGEDAKALHGLNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQY 434

Query: 434 YRESPANSILLGS 446
            R++  +++  G+
Sbjct: 435 IRDAKIDTLYEGT 447


>gi|182434841|ref|YP_001822560.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775359|ref|ZP_08234624.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463357|dbj|BAG17877.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655692|gb|EGE40538.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 404

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 59/311 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDG 224
           TP    +W P+ +  E DP   A            ++E   G+D++A+T++ + I  SD 
Sbjct: 104 TPDQLAEWVPQCYGDEDDPKVAA----------FCVSEPGAGSDVSAMTTKARYIEASDS 153

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNK 278
            + +SG K W  +  +++  +++A V+  +G      F+VP         GL   R   K
Sbjct: 154 -WVISGQKAWITNGGIAEVHVVVASVDPALGARGQAAFIVPP-----GTKGLTAGRTVKK 207

Query: 279 IGNRSNATVEL---EFSNTFGFLLG-------------DLNVSTGPVEDMKILIYLDSAI 322
           +G R++ T +L   E +     LLG             + + + G        +   +  
Sbjct: 208 LGLRASHTADLFLDEVTVPGHCLLGGKEKLDARLARAREGSTAKGQAAMATFEVSRPTVA 267

Query: 323 MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA---- 377
               G+ R +   A+ YA  R   G  +I+   +  A+ADI  +I A   L ++ A    
Sbjct: 268 AQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLLIWQAAWMAR 327

Query: 378 --NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +FD  +              ++K    ++A A   +A++ +GG+GY  E  + R YR
Sbjct: 328 NDRTFDAGQG------------SMSKLRAGELAVAATEKAVQILGGAGYSREHPVERMYR 375

Query: 436 ESPANSILLGS 446
           ++   +I  G+
Sbjct: 376 DAKIYTIFEGT 386


>gi|114571235|ref|YP_757915.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114341697|gb|ABI66977.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 391

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 51/276 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA---QVEGRVG- 254
             LTE   G+D+AAI+++ +   D  Y +SG K F+S+  ++D +++ A   + +G  G 
Sbjct: 132 FALTEPDAGSDVAAISTRAELDGDH-YAISGEKTFISNGGIADFYVVFARTGEADGARGL 190

Query: 255 -CFLVP---------RLLEDGSPNGL-------CYQRLKNKIGNRSNATVELEFSNTFGF 297
              +VP           +E  +P+ L       C   + ++IG         E  + F  
Sbjct: 191 SAIIVPATTPGLEVVERIETIAPHPLARLRFDKCRVPVTHRIG---------EGGSGFRI 241

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G L+V    V              ++   R +L EA   ARRR++ G  L D P ++ 
Sbjct: 242 AMGTLDVFRSTV-----------GAAALGFARRALDEATARARRRNLFGAPLADLPGVQT 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +A++A+DI AA  L +R A + D+  +R + EAA A       K +  + A   I  A+
Sbjct: 291 QLAEMAMDIDAAALLIYRAAWTKDQGAARVTREAAMA-------KLYATEAAQRAIDTAV 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +  GG G  +       YRE  A  I  G+     L
Sbjct: 344 QIFGGLGVTKGSVPEALYREIRALRIYEGASEVQKL 379


>gi|149376829|ref|ZP_01894585.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358836|gb|EDM47304.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 379

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A I ++  +  D  Y ++G K F++S M      +A   G  G   + 
Sbjct: 124 LAVTEPGGGSDVANIKTRAVRDGDD-YIVNGSKTFITSGMRADHYTVAVRTGGEGHGGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            LL D    G    +   K+G  ++ T EL F +       L+G  N     +    +  
Sbjct: 183 LLLIDRDMPGFSTGKKLKKMGWWASDTAELFFEDCRVPANRLIGAENAGFIAIMSNFLFE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  +IM+     ++L  ++ +A +R   G  +    V +  + D+A  +  A   ++R 
Sbjct: 243 RLSLSIMAYMTAEIALEASMAWAGQREAFGRPVNKFQVTRHKLVDMATQVDVAREYTYRC 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A      K+  ++ A A       K +   +   V  EA++  GG GY+ E  + R YR+
Sbjct: 303 AALMQAGKNPIKQVAMA-------KNFAVDVCEKVTREAVQIHGGMGYMRESVVERLYRD 355

Query: 437 SPANSILLGSGNAM 450
               SI  G+   M
Sbjct: 356 GKILSIGGGTDEIM 369


>gi|108800705|ref|YP_640902.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869844|ref|YP_939796.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771124|gb|ABG09846.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695933|gb|ABL93006.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 382

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253
           + +TE   G+D+A + +   +  D  Y ++G K F++  + +D  +++A+        R 
Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRR 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G  L+  ++EDG P G    R   K+G +   T EL F++       LLG+   +   + 
Sbjct: 183 GLSLI--VVEDGMP-GFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLG 239

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAA 369
                  L  A+ SV+  R +L   I Y + R   G  +      K  +A ++ +I AA 
Sbjct: 240 HNLAQERLTVAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEIEAAQ 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T L   + +  D   SR + A          K +C +M    +   ++  GG GY+ E  
Sbjct: 300 TMLDRAVLDHVDGVLSREDAAR--------VKLFCTEMQARAVDRCLQLFGGYGYMMEYP 351

Query: 430 IARHYRESPANSILLGSGNAM 450
           IAR Y ++    I  G+   M
Sbjct: 352 IARLYNDARVARIYAGTSEVM 372


>gi|291296491|ref|YP_003507889.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290471450|gb|ADD28869.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 404

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 20/285 (7%)

Query: 185 PTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           P  KA    P+ +        L+E   G+D+ A+ ++  +   G Y L+G K W  +  +
Sbjct: 111 PEQKARYLGPVARGESIAAFALSEPEAGSDVGALCTEA-RAEGGDYILNGQKTWISNGGI 169

Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +D +++ A+  G  G   +   ++E G+P     +RL+  I     A +  E        
Sbjct: 170 ADFYVVFARAPGSQGAKGISAFVVEAGTPGLEVAERLEV-IAPHPLARLRFEHCRIPARQ 228

Query: 299 -LGDLNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVM 355
            LG+     G    M+ L I+  S   +  G  R +L EA+  A  R + G  L D  + 
Sbjct: 229 RLGEEG--QGFKIAMQTLDIFRTSVAAAALGFARRALDEALFRATTRPLFGQTLADFQLT 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A+ I AA  L++R A   D+ +  ++EAA A++ A  T+Y     A  VI  A
Sbjct: 287 QARLADMAVKIDAAALLTYRAAWLRDQGQRVTQEAAMAKLTA--TEY-----AQQVIDGA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG G    + +   YRE  A  I  G+     L +   L K
Sbjct: 340 VQLWGGLGVTRGQVVESLYREIRALRIYEGASEVQQLIIARELLK 384


>gi|170722058|ref|YP_001749746.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760061|gb|ACA73377.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 45/294 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + W P++ S E               IG   LTE + G++   + ++ + I DG 
Sbjct: 104 TPEQQQAWLPRLASGE--------------VIGCFCLTEPQAGSEAHNLRTRAELI-DGQ 148

Query: 226 YCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKI 279
           + ++G K F+S+       I+ A  +  +G      FLVP      +P G    R ++K+
Sbjct: 149 WVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP----TDNP-GFKVDRSEHKM 203

Query: 280 GNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G R++ T  + F N       LLG+    L ++   +E  +I I    A  ++   R + 
Sbjct: 204 GIRASDTCAVTFDNCCIPAANLLGERGKGLAIALSNLEGGRIGI----AAQALGIARAAF 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y+R R   G  + +   +   +AD+ + + AA  L    A      +    EA+ 
Sbjct: 260 EAALVYSRDRVQFGKPINEHQSIANLLADMQVQVNAARLLVLHAARLRSAGRPCLSEASQ 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ A        +MA  V + A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 320 AKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|302550078|ref|ZP_07302420.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467696|gb|EFL30789.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 390

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 45/265 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D AA+ ++  +  D  + ++G K W     ++D   ++A+   EG  G   F
Sbjct: 133 LSEPHSGSDAAALRTKAVREGDD-WVINGTKAWITHGGIADFCTVMARTGEEGPRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-- 314
           LVP     G   G+     + K+G + + T ++ F         D+ VS    +D +I  
Sbjct: 192 LVP-----GDAPGVSAAAPEKKMGMKGSPTAQVHFD--------DVRVS----DDRRIGE 234

Query: 315 --------LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
                   L  LDS  + ++   + +A     EA+ YA +R   G  + D   ++  +AD
Sbjct: 235 EGQGFAIALSALDSGRLGIAACAIGVAQAALDEALAYAAQRRQFGKPIADFQGLRFMLAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I A  AL    A   D  +  + +AA A       K  C   A  V  +A++ +GG
Sbjct: 295 MATQIEAGRALYLAAARLRDAGRPFARQAAMA-------KLHCTDTAMRVTTDAVQILGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY  +    R+ RE+    I+ G+
Sbjct: 348 YGYTADFPAERYMREAKVLQIVEGT 372


>gi|241554280|ref|YP_002979493.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863586|gb|ACS61248.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 375

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 20/258 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257
           G  LTE + G+D + + ++ ++  D  Y + G K F++S  + D  I+ A  +  VG   
Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGDH-YVIDGSKQFITSGKNGDVIIVFAVTDLDVGKKG 178

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVE 310
           +   +      G    R++ K+G  S+ T ++ F++         G       ++   +E
Sbjct: 179 ITAFIVQTDTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLGAEGEGYRIALANLE 238

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +I I    A  +V   R +   A  YAR R   G  + +   +   +AD+A+ I AA 
Sbjct: 239 GGRIGI----AAQAVGMARAAFEAARDYARERTAFGKPIFEHQAVAFRLADMAVRIEAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L F  A+  +       EA+ A++ A        +MA  V ++A++  GG GY+ +  +
Sbjct: 295 QLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMADYPV 347

Query: 431 ARHYRESPANSILLGSGN 448
            R YR+     I  G+ +
Sbjct: 348 ERIYRDVRICQIYEGTSD 365


>gi|314965935|gb|EFT10034.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA2]
 gi|327328790|gb|EGE70550.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL103PA1]
          Length = 382

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            G  L+E   G+D AA+  +  +  D  + L+G K W   +  +   ++ A  +      
Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
            +  L+      G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +
Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ ++ I    A  +V   + +L  A  + ++R   G  L +   ++  +AD+A+ + AA
Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL++  A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ +
Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 349 VERMFRDAKVTQIYEGT 365


>gi|118469937|ref|YP_889443.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
 gi|118171224|gb|ABK72120.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 47/294 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P I S E             + I + +TE   G+D+A I +   +  D  + ++G 
Sbjct: 109 RRWLPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD-WIINGS 154

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           K F+SS ++ D  +++A+ +   G      F+V R +E     G    R  +K+G  S  
Sbjct: 155 KTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERGME-----GFTRGRKLDKMGLHSQD 209

Query: 286 TVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           T EL F N       LLG         ++  P E + I      AI +++G R    E +
Sbjct: 210 TSELHFENVRVPHANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGARAVFDETL 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  +      +  +A++  ++        R      + +  + EAA A   
Sbjct: 264 QYCKDRKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVDGELTAVEAAKA--- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               K+W  + A  ++   ++  GG GY+ E  +AR Y +    +I  G+   M
Sbjct: 321 ----KWWATETAKKIVDNCVQLHGGYGYMMEYRVARAYVDGRIQTIFGGTTEIM 370


>gi|146307065|ref|YP_001187530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575266|gb|ABP84798.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 375

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ + S+     LTE + G+D + + ++ ++   G Y LSG K F++S      +++  V
Sbjct: 111 PLAEGSMLGAFALTEPQAGSDASDLRTRARR-DGGHYVLSGAKQFITSGSHAGMVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
                G+ G   F+VP         G    R+++K+G  ++ T +++           LG
Sbjct: 170 TDPGAGKKGISAFIVPT-----DTPGFSVVRVEDKLGQHASDTCQIQLDEVRIPAELRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  SV   R +   A  YA  R   G  +I+   + 
Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQSVGMARAAFEAARDYAHERVTFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A+  +       EA+ A++ A        +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+++  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSD 365


>gi|312139135|ref|YP_004006471.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888474|emb|CBH47786.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 382

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA++++  +  D  Y L+G K F+S +  SD ++++A+        +  F
Sbjct: 123 LTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSDVYVVMARTGAAGARGISAF 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP+        GL +   + K+G  +  T ++         +   N+  G  E  +I +
Sbjct: 182 IVPK-----DTPGLSFGANEKKMGWNAQPTRQVILDQV---RVPAANLLGGEGEGFRIAM 233

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L+ A  SV G + +L +A+ Y   R   G  L++   ++  +AD+ +++ AA 
Sbjct: 234 KGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFRLADMRIELEAAR 293

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +R A++ D   +   E      +  + K +       V  EA++  GG GY+ E  +
Sbjct: 294 TLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQLHGGYGYLAEYGL 347

Query: 431 ARHYRESPANSILLGSGNAM 450
            +  R+   + IL G+   M
Sbjct: 348 EKIVRDLRVHQILEGTNEIM 367


>gi|197105867|ref|YP_002131244.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479287|gb|ACG78815.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 382

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  ++P +D  I+ A+ +       +
Sbjct: 125 LAMSEAGSGSDVVSMRLKAEKKGD-RYVLNGTKFWITNAPHADTLIVYAKTDPDAASRGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       ++G LN   G +  M  L
Sbjct: 184 TAFIIEKEFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPLNGGVGVL--MSGL 241

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A++S      M+  +   + Y R R   G  +    +M+  IAD+ + + +A A 
Sbjct: 242 DY-ERAVLSAGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADMYVALNSARAY 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D   +   +AA A +MA        + A  V  EA++ +GG+GY  E  + R
Sbjct: 301 VYAVAKACDAGMTTRFDAAGAILMA-------SENAVKVSLEAVQALGGAGYTREYPVER 353

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 354 FLRDAKLYDIGAGT 367


>gi|112983006|ref|NP_001037672.1| acyl-coenzyme A dehydrogenase [Bombyx mori]
 gi|103058047|gb|ABF71566.1| acyl-coenzyme A dehydrogenase [Bombyx mori]
          Length = 422

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 32/281 (11%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           T  A    LTE   G+D  A+ +  +K  +  Y +SG K W  +S ++  F+++   +  
Sbjct: 156 TEYAGSFCLTEPSSGSDAFALKTVAKKEGEH-YIISGSKMWISNSDVAGVFLVMTNADPS 214

Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
            G     CF+V R        GL   + +NK+G R++ T  + F N       +LG+   
Sbjct: 215 KGYKGITCFIVER-----ETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEYGK 269

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                       +L+   + ++   + L +      I Y   R   G  + +   +   I
Sbjct: 270 GYKYAAG-----FLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQI 324

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +   + AA  L++  A   +      +EAA A       KY+  ++A  + ++ ++ +
Sbjct: 325 AHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMA-------KYFASEIAQTLTSKCIDFM 377

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG G+  +    + YR++   +I  G+ N  +  +  LLE+
Sbjct: 378 GGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLER 418


>gi|289743333|gb|ADD20414.1| short-chain acyl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 416

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 32/275 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  FI+ A  +   G   
Sbjct: 156 FALTEPGSGSDAFSLKTVAKK--DGKDYVINGTKMWISNSDLAGLFIVFANAKPEDGYRG 213

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310
           +   L + +  GL   + ++K+G R++ T  + F        N  G        + G   
Sbjct: 214 ITTFLVERNTPGLTVNKPEDKLGIRASGTCMVTFEDVRIPEENLLGTFGHGYKYAAG--- 270

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 +L+   + ++   + LA+      I Y   R   G  + +   M+  IA +A +
Sbjct: 271 ------FLNEGRVGIAAQMIGLAQGCFDHTIPYLMDRKQFGTEVYNFQSMQHQIAAVATE 324

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L++  A   +      +EAA A       KY+  ++A     + ++ +GG G+ 
Sbjct: 325 IEAARLLTYNAARMVEHGIPFVKEAAMA-------KYYASEVAQRATIKCIDWMGGVGFT 377

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +    ++YR+    +I  G+ N  +  +  L++K
Sbjct: 378 RDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKLIKK 412


>gi|170735328|ref|YP_001774442.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821366|gb|ACA95947.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 393

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 19/273 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL- 257
           L +TE + G+D++ I +  ++  +G Y L+G K W  +S ++D  ++ A+     G  L 
Sbjct: 121 LSITEAQSGSDVSGIRTTARR-KNGGYVLNGSKIWCTNSHIADFILVAAKTLDEQGQPLG 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + D    GL     ++K+G R   +  L F +   F+  D  +     +  K+ + 
Sbjct: 180 INLFIVDRHTPGLTIGNEEDKMGARGVPSCPLYFDDA--FIRADDRLGPEGSQGFKVAME 237

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+++   V+   V +A+     A+ + + R   G  + D   ++  IAD+     AA  
Sbjct: 238 ALNTSRPIVAARAVGIAQGAIDHAVKFIQDRVAFGQAISDFQGVRWMIADMVTQTEAARQ 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R A+  D   S  E A     MA + K +   +A  V  +A++  G +G   E  I 
Sbjct: 298 LVYRTASLVDAGVSGRELAP----MAAMAKMFASDVAMKVATDAVQLFGAAGISNEYPIN 353

Query: 432 RHYRESPANSILLGSG----NAMVLDVLNLLEK 460
           R++R++    I+ G+     N +  +VL  + K
Sbjct: 354 RYFRDAKVVQIIEGTNQIQRNIVADNVLGRIRK 386


>gi|77459090|ref|YP_348596.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77383093|gb|ABA74606.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 383

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 30/280 (10%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E   T  A +   +V     LTE + G++   + ++ + + DG + ++G K F+S+  
Sbjct: 104 SEEQKQTWLADLASGAVIGCFCLTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGK 162

Query: 240 SDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++  V     G+ G   FLVP  +      G    R ++K+G R++ T  +  +N
Sbjct: 163 RAKLAIVFAVTDPDLGKRGISAFLVPTDMP-----GFIVDRTEHKMGIRASDTCAVTLNN 217

Query: 294 TF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                  LLG+    L ++   +E  +I I    A  ++   R +   A+ YAR R   G
Sbjct: 218 CSIPEANLLGERGKGLAIALSNLEGGRIGI----AAQALGIARAAFEAALGYARDRVQFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +++   +   +AD+ + I AA  +    A      K    EA+ A++ A        +
Sbjct: 274 KAIVEHQSIANLLADMQMQINAARLMILHAARLRTAGKPCLSEASQAKLFAS-------E 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           MA  V + A++  GG GY+E+  + ++YR++    I  GS
Sbjct: 327 MAEKVCSSAIQIHGGYGYLEDYPVEKYYRDARITQIYEGS 366


>gi|18313372|ref|NP_560039.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160902|gb|AAL64221.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 378

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 135/303 (44%), Gaps = 46/303 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T R+ ++  PK+ + E             V +   L+E   G+D AAI ++ +KI  G +
Sbjct: 99  TKRMKEEILPKVAAGE-------------VIVAFALSEPCCGSDAAAIRTRAEKIG-GEW 144

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQ---VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++GHK W  S   +D +++ A+   +E R   +  FL+PR          C +    ++
Sbjct: 145 VINGHKMWITSGLYADYYLLFARTGPLEARHKAITAFLIPR--------SNCVEATPIEV 196

Query: 280 -GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334
            G R   T E++F++      GD +V         + ++ ++   ++V  + + +AE   
Sbjct: 197 MGVRGTGTAEVKFNSCKA---GDEDVVGEVNGGWSVAMWGINMGRLNVGAIGLGIAEEAF 253

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  YA +R   G ++ D   ++  +A++   + A  AL ++ A      K R E    
Sbjct: 254 YQAYDYAHKREAFGRLIADFQAIQHYLAEMYARVEALRALVYKTA------KMRDENHPD 307

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             + A + K    + A      A++ +GG GY  +  +   YR++    I  G+ N ++L
Sbjct: 308 FPLYAQVAKLMGSRTAVETARLAVQILGGYGYSTDSHVEMLYRDAKVTEIYEGT-NEIIL 366

Query: 453 DVL 455
           + +
Sbjct: 367 NTI 369


>gi|215404688|ref|ZP_03416869.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|215412529|ref|ZP_03421263.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215446976|ref|ZP_03433728.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|289746526|ref|ZP_06505904.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|289758852|ref|ZP_06518230.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|294994186|ref|ZP_06799877.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 210]
 gi|298526193|ref|ZP_07013602.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|289687054|gb|EFD54542.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|289714416|gb|EFD78428.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|298495987|gb|EFI31281.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|326904339|gb|EGE51272.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis W-148]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YMLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|172039877|ref|YP_001799591.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851181|emb|CAQ04157.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 48/331 (14%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A  I A  L   A+L    +MSP +   S++    +    +++ PKI + +         
Sbjct: 65  ALSIVAEELARQARLPVLLVMSPGIV-GSILLHGGSAEQKEEFLPKIAAGDL-------- 115

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV- 249
            K + AI    TE   G++   I++    + DG Y L+G K F+S +  +   +++A++ 
Sbjct: 116 -KCAFAI----TEPDAGSNTHRISTSLTPLGDGKYSLTGTKCFISGADEAQMILVVAKIK 170

Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKN-KIGNRSN-----ATVELEFSNTFGFLL 299
               + ++GC LVP   E     GL   +++  K  + S        VE++ S+  G + 
Sbjct: 171 PDGEDAKLGCCLVPCDTE-----GLTMSKIETEKFSDDSQWLLSFDRVEVDQSSVIGGIS 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L      +   +IL+   +A  +   +R +L  A+ YA  R V G  +     +   +
Sbjct: 226 SGLKALFHGLNPERILM---AAFCNGIALR-ALDLAVAYAESREVWGAPISTHQAISHPL 281

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ +DI  A  ++FR A+ FD        A Y       +K+   + A   +  A++  
Sbjct: 282 AEVKIDIELARNMTFRAASDFDSGGDCGASANY-------SKFAAARAAVKSVDRAIQTH 334

Query: 420 GGSGYIEERSI------ARHYRESPANSILL 444
           GG+G++++  +      AR +R +P +  ++
Sbjct: 335 GGNGFVKDYRVSELFWPARLFRTAPVSEEMI 365


>gi|114769691|ref|ZP_01447301.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
 gi|114549396|gb|EAU52278.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
          Length = 404

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 186 TNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243
           T   P   T   +G  GLTE   G+D   + ++ ++I DG Y +SG K W  +SP++D F
Sbjct: 131 TKYLPKLATGELVGCFGLTEPDHGSDPGGMLTRAKQI-DGGYLISGAKNWITNSPIADVF 189

Query: 244 IMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
           I+ A+ +    ++  F++ R ++     GL   +++ K   R++ T  ++    F     
Sbjct: 190 IIWAKSDAHDNKIKGFILERGMK-----GLESPKIEGKFSLRASTTGMIQMDEVFVPEEN 244

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L +++   GP   +    Y   A  ++         A  Y   R   G  L    ++++
Sbjct: 245 ILPNISGLAGPFGCLNRARY-GIAWGTMGAAEFCWHAARQYTMDRKQFGRPLAQTQLIQK 303

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  +I+       R+   FDE K  +E       +  + K   C  A  +   A +
Sbjct: 304 KLADMQTEISLGLQGCLRMGRLFDEHKVPAE-------LISLMKRNNCGKALDIARTARD 356

Query: 418 CIGGSGYIEERSIARH 433
             GG+G  +E S+ RH
Sbjct: 357 MHGGNGVSDEYSVIRH 372


>gi|260575697|ref|ZP_05843694.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259022095|gb|EEW25394.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 379

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P      ++G   LTE   G+D A + S+  +   G Y L G K F+S+  ++D  ++ A
Sbjct: 113 PAAAAGTSLGAFALTEPNAGSDPADMRSRATRTPQG-YHLKGRKCFISNGGVADFVVVYA 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + D    G    R +  +G R     EL+F              +G
Sbjct: 172 VTDPAAGHRGISAFVVDKGTPGFTPGRAEQTMGLRGGHVWELDFDCHLPETQRLGQEGSG 231

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
               MK+L   D+  + V+ M + +A+     A  +A+ R + G  L D+  ++  +AD+
Sbjct: 232 FKTAMKVL---DAGRVEVAAMCIGIAQQALDLATQWAKTRIIGGAPLADRQGIRWQLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ALD+ +A  L      + + A+ R     ++ + A + K    +MA  V   A++  GG 
Sbjct: 289 ALDLQSARLL------ALEAARQRQNHERFS-LAASMAKLHASEMAHRVTDAALQLHGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  +  + R  R+     I  GS
Sbjct: 342 GYTRDFPLERLARDVRIMRIYEGS 365


>gi|257455371|ref|ZP_05620606.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60]
 gi|257447333|gb|EEV22341.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 17/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ ++  K  D  Y ++G K F+S +  +D  +++A+     G   V  
Sbjct: 124 LTEPNAGSDAGSLKTKAVKQGD-YYHITGQKMFISGAGATDVLVVMARTSDN-GAKGVSA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + D + +G+ Y + ++K+G ++  T  + F++       LLG+     G    MK L  
Sbjct: 182 FIVDANSDGISYGKNEHKMGWKNQPTAAVHFTDVKVPAENLLGE--EGQGFTFAMKGLDG 239

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  +V   + +L  A+ Y + R   G  L     ++  +AD+   + +A  +  R
Sbjct: 240 GRINIATCAVGTAQAALDRAVQYVQERSQFGKTLDQFQNVQFKLADMLTHLVSARQM-VR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA    ++KS    A  A     + K     ++  +  +A++  GG GY++E  + RH R
Sbjct: 299 LAAYHLDSKSPDATAYCA-----MAKRLATDLSFDIANQALQLHGGYGYLQEYPLERHVR 353

Query: 436 ESPANSILLGSGNAMVLDV-LNLLEKG 461
           +   + IL G+   M + V   ++E G
Sbjct: 354 DLRVHQILEGTNEVMRMIVSRKMMEDG 380


>gi|189466830|ref|ZP_03015615.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM
           17393]
 gi|189435094|gb|EDV04079.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM
           17393]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKREGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R      +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFNKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  Y+++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDVYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|144898578|emb|CAM75442.1| Butyryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D  +I ++  +  D  Y L+G K F++S     ++  F +     G+ G   
Sbjct: 123 LTEPEAGSDAGSIKTRAVRDGD-FYVLNGTKQFITSGRNAKVAIVFAVTDPSAGKKGLSA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
           F+VP      SP G    R+++K+G  ++ T ++          N  G     L ++   
Sbjct: 182 FIVP----TDSP-GWVVARVEDKLGQHASDTCQIILEDLRIPAENRLGAEGEGLKIALAN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  ++ I    A  SV     +L  A+ YA+ R   G  +I+   +   +AD+A  + A
Sbjct: 237 LEGGRLGI----AAQSVGMASAALDHALRYAQERKQFGKAIIEHQAVAFRLADMATRLEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L   +A   D      +EA+ A+++A  T    C       ++A++  GG GY+ + 
Sbjct: 293 ARHLVLHVATLRDAGLPCLKEASMAKLLASETAEKVC-------SDAIQIHGGYGYLADF 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R YR+     I  G+ +   L +   L
Sbjct: 346 PVERIYRDVRVCQIYEGTSDIQRLVIARAL 375


>gi|118618686|ref|YP_907018.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99]
 gi|118570796|gb|ABL05547.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99]
          Length = 386

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 40/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL FS+               F +L+ +L  
Sbjct: 189 SLLVVERGMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + Y + R   G  + +    +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELAT 297

Query: 365 DIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   AT +   +  S +   + K  +E+AA A       K++  +   ++    ++  GG
Sbjct: 298 E---ATMVRIMVDESIELHLDGKLTAEQAAMA-------KWYSTEKQVSLNDRCLQLHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  +AR Y +S   +I  G+   M
Sbjct: 348 YGYMREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|83309776|ref|YP_420040.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82944617|dbj|BAE49481.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 41/303 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G K
Sbjct: 117 YLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGD-RYVLNGTK 161

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P +D  ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F
Sbjct: 162 MWITNGPDADVIVVYAKTDVTAGPRGITAFLVEKTFKGFSVAQKLDKLGMRGSNTGELVF 221

Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                   N  G +   +NV    ++  +++  L    + +  M   +   + Y   R  
Sbjct: 222 QDCEVPEENVLGAVGKGVNVLMSGLDYERVV--LTGGPLGI--MAACMDVVVPYVHERTQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +M+  +AD+     A  A ++ +A + D  ++  ++AA   +       W 
Sbjct: 278 FGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGETSRKDAAGVILYGAEKATW- 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                 +  EA++ +GG+GYI E +  R  R++    I  G+G + +  +L     G  L
Sbjct: 337 ------MALEAIQTLGGNGYINEYATGRLLRDAKLYEI--GAGTSEIRRML----IGREL 384

Query: 465 FEQ 467
           FE+
Sbjct: 385 FEE 387


>gi|313246358|emb|CBY35274.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 31/271 (11%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251
           L +TE   G+D+ ++ T+  Q      Y L+G+K W  + P+ D  I  A+ +       
Sbjct: 295 LSMTEPTAGSDVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGD 354

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTG 307
            +  F+V     D    G     +  K+G R + T +L F N        LLG+   +  
Sbjct: 355 SITAFIV-----DTDTEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFV 409

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  + I   L +A M V  M+  + ++  YA  R   G  +    +M+  +A++   ++
Sbjct: 410 LMRGLNIERLLGAA-MPVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLS 468

Query: 368 AATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A  A ++ +  S D   EA S  E A+    ++      C K+A     E ++ +GG+GY
Sbjct: 469 ACRAYTYSMLRSADQDPEAMSNHECASLIMFVSD----ACTKVA----LEGIQILGGNGY 520

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + +  + R+ R+  A  + +G+G   V  V+
Sbjct: 521 VNDYPVNRYMRD--AKLMEIGAGTTEVRKVI 549


>gi|304438947|ref|ZP_07398870.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372613|gb|EFM26196.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 34/270 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254
            GLTE   GTD A    Q   + DG  Y L+G K F+++   +D FI++A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTIAVLDGDHYILNGTKIFITNAGFADVFIIIAMTDKSQGTKG 180

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
              F+V R  E     G      ++K+G R+++T EL F N       LLG      G  
Sbjct: 181 ISAFIVERGFE-----GFRVGEPEDKMGIRASSTCELIFENCKVPKENLLGREGKGFGLA 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK L   D   + ++   V +AE      I Y + R   G  +      +  +AD+  
Sbjct: 236 --MKTL---DGGRIGIASQAVGIAEGAIDETIKYTKERKQFGRRISQFQNTQFQLADMKT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA  L +R A++       S  AA A++ A  T       A  V    ++  GG GY
Sbjct: 291 KAEAAQLLVYRAADAKQNKIPYSHYAAMAKLFASET-------ASDVTRRCLQLFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
            ++  I R  R++    I  G+   M + V
Sbjct: 344 TKDYPIERMMRDAKITEIYEGTSEVMRMVV 373


>gi|313125944|ref|YP_004036214.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312292309|gb|ADQ66769.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 381

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
             L+E   G++ A +++  ++  D  Y ++G K W  +    D  I+ A+ +      V 
Sbjct: 127 FALSEPDAGSNPAEMSTVARREGDE-YVINGKKQWITNGQRGDVCILFAKTDPDDPSSVT 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP+        G+   + ++K+G R++ T  L F +        +       E+ K 
Sbjct: 186 QFLVPK------DAGIEVGKKEHKLGLRASDTTSLIFDDVH------IPAENRLTEEGKG 233

Query: 315 LI----YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           L      L    M ++   V LA     EA  YA  R   GG + D   ++   +++A  
Sbjct: 234 LSAAFRILTGGRMGIAAQAVGLAQSAFDEAREYAHDREQFGGPISDIQAVRHKFSEMATQ 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I A+  L  R A   D+A          RI A + KY+  + A  V  EA++  GG GY 
Sbjct: 294 IHASR-LMVREAARQDDAGEDP------RIAASMAKYFASEAAVDVTNEAVQIHGGYGYT 346

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R YR+S   +I  G+
Sbjct: 347 TDFEVERMYRDSKITTIYEGT 367


>gi|255945095|ref|XP_002563315.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588050|emb|CAP86121.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 425

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           + K ++A   GLTE   G+D  ++ +  ++     G+Y LSG K W  +SP++D  ++ A
Sbjct: 152 LAKGTLAGCFGLTEPNHGSDPGSMETVAREHPTQKGMYLLSGSKTWITNSPIADVALVWA 211

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           ++E  G++  F+V R  E  +P       +KNK   R++ T  ++  N       +L ++
Sbjct: 212 KLESTGKIRGFIVER--ERATPGSYETPAIKNKSALRASITGMIQMDNCPVPAENMLPEV 269

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361
               GP   +     L  A  ++  +   LA A  Y+  R+   G  L    +++  +A+
Sbjct: 270 EGLKGPFTCLNS-ARLGIAFGAMGALEDCLARAREYSLERKQFKGNPLAKYQLIQMKLAN 328

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A D A  T  + ++A   D  K+  E       M  + K   C  A A      E  GG
Sbjct: 329 AATDAAYGTLAAVQVARLKDAGKATPE-------MISMIKRQNCDRALANSRILQEVFGG 381

Query: 422 SGYIEERSIARH 433
           +   +E  IARH
Sbjct: 382 NAASDEYHIARH 393


>gi|319761248|ref|YP_004125185.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115809|gb|ADU98297.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 416

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 32/287 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250
           L+E   G+D+A+I+ + + + D  + L+G+K W   +  +D   + A+           E
Sbjct: 131 LSEPDTGSDLASISCRAELVGDE-WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWE 189

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CFL+ +   +  P G+  Q +  KIG     T EL  ++     +   N+   P +
Sbjct: 190 G-ISCFLIEKKRGE-FPPGMVGQPIP-KIGYFGWKTFELALND---LRVPRENLIGAPGQ 243

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I+   L++A    +   + LA+     AI YAR R   G  + +   ++  IA +A 
Sbjct: 244 AFLIMAKGLETARAHTAARAIGLAQGALEDAIAYARERKQFGMPIAEHQAIRFKIATMAT 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L   + ++ D  +    EA+  ++ A        +MA  V +EA++  GG+GY
Sbjct: 304 EVEAARQLLHYVCSAIDSGRRCDTEASMVKLFA-------TEMAERVTSEALQIFGGAGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            +  ++ RH+R++    I  G+       + N L  G ++ E + ++
Sbjct: 357 TKLFAVERHWRDARLTKIFEGTSEIQQRIIANNL-LGKSVLEDMIAS 402


>gi|294677047|ref|YP_003577662.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294475867|gb|ADE85255.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 124/268 (46%), Gaps = 17/268 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + ++  D +Y L+GHK W  +   +D  ++ A+ +   G   +
Sbjct: 128 LAMSESGAGSDVVGMKLRAERRGD-VYVLNGHKYWITNGCDADTLVVYAKTDPAAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G       +K+G R + T +L F +        L +    V  +   +  
Sbjct: 187 TAFIVERGMKGFSSSAHFDKLGMRGSNTAQLFFDDCEVPAENVLGLEGKGVRVLMSGLDY 246

Query: 319 DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  ++S  G  + +A   E + YAR R   G  +    +M+  IAD+ +    A A ++ 
Sbjct: 247 ERVVLSGIGTGILMACLDEVLPYARTREQFGQPIGSFQLMQAKIADMYVAANTARAYTYE 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  +   ++AA        T  +  + A     +A++ +GG+G++ + +++R +R
Sbjct: 307 VAKACDRGEVTRQDAA-------ATVLYASEQAMVQAHQAVQALGGAGFLNDSTVSRLFR 359

Query: 436 ESPANSILLGSGNAMVLDVL---NLLEK 460
           +  A  + +G+G + +  +L    L+EK
Sbjct: 360 D--AKLMEIGAGTSEIRRMLIGRELMEK 385


>gi|289645095|ref|ZP_06477122.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505092|gb|EFD26164.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 382

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 38/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV-----EGR 252
           +G+TE   G+D+A + +    + DG  Y L+G K F+S   ++D  +++A+      + R
Sbjct: 124 IGMTEPGAGSDLAGVRTTA--VRDGEHYVLNGAKTFISGGALADLVVVVARTSRSESDRR 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            G  L+  ++EDG P    +++ +N  KIG +   T+EL F++       LLG+   +  
Sbjct: 182 RGLSLL--VVEDGMPG---FEKGRNLAKIGLKVQDTIELSFTDVRVPVENLLGEEGAAFE 236

Query: 308 ------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 P E + I I   +A  +     V+      Y R RHV G  +      +  +A 
Sbjct: 237 QLTHGLPQERLSIAISSLAAARAALDTTVT------YVRERHVFGKPVSYFQNTRFELAA 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA A+        D A +       + + A   K +C ++    +   ++  GG
Sbjct: 291 VATEIEAAQAM-------VDRALAEHVAGELSPVDAAKVKLYCTELQGRTVDRCLQLFGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GYI E  IAR Y ++    I  G+   M
Sbjct: 344 YGYILEYPIARLYADARVTRIYGGTSEIM 372


>gi|238506004|ref|XP_002384204.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220690318|gb|EED46668.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 531

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 43/249 (17%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           + K  +A   GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  I+ A
Sbjct: 158 LAKGKIAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGTKTWITNSPISDILIVWA 217

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           ++E  G++  F+V R  +   P  L    +KNK      A   +      G   G +   
Sbjct: 218 KLESTGKIRGFVVER--DQCPPGTLETPAIKNK-----TALTGVYHRARLGIAFGAM--- 267

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIAL 364
            G +ED                    L+ A  YA  R+   G  L    ++++ +AD A 
Sbjct: 268 -GALEDC-------------------LSRARTYALERKQFKGNPLAKYQLIQKKLADAAT 307

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D A  T  + ++A   DE KS  E       M  + K   C  A A      E  GG+  
Sbjct: 308 DAAYGTLAATQVARLKDEGKSTPE-------MISMIKRQNCDRALANSRILQEVFGGNAT 360

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 361 SDEYHIGRH 369


>gi|325183020|emb|CCA17474.1| isovalerylCoA dehydrogenase putative [Albugo laibachii Nc14]
          Length = 422

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 122/257 (47%), Gaps = 28/257 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLS------SPMSDAFIMLAQVEG 251
           G+G++E   GTD+  + +  +    G+Y  L+G K +++      + + D F++ A+  G
Sbjct: 150 GMGMSEPSVGTDVLGMNTSARLSRCGMYYLLNGSKMWITNGALNDTELGDYFLVYARTGG 209

Query: 252 ------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-D 301
                  + CF+V +  +  S      QR+KNK G R++ T EL F +       L+G +
Sbjct: 210 SSTSKKNISCFIVEKGFQGFSLG----QRIKNKCGMRASNTAELVFEDCKIPIENLIGKE 265

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +     + ++KI   +  A MS+   R SL     YA+ R   G  L     ++++I++
Sbjct: 266 GDAVLCMMRNLKIE-RVTLAAMSLGIARRSLQIMNDYAKERQAFGQSLNTFGQIQKSISE 324

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +  A  +  ++       A++ + ++A   +     K +C  MA  +   A++ +GG
Sbjct: 325 SYAEFMAGRSYVYQ------AARNLALDSADFDVDCDGVKLYCGVMAKRIADRAIQTLGG 378

Query: 422 SGYIEERSIARHYRESP 438
           +GYI +  + R +R++ 
Sbjct: 379 NGYIGDYVVERLWRDAK 395


>gi|156042750|ref|XP_001587932.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980]
 gi|154695559|gb|EDN95297.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 428

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 37/252 (14%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++  T++      G Y +SG K W  +SP++D F++ A+++  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307
            F++ R   D  P  L    LKNK G R++ T  ++        +N F  + G      G
Sbjct: 224 GFIIDR--ADCPPGTLETPALKNKNGLRASLTGMIQLDECPVPEANMFQTVEG----LRG 277

Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361
           P         L+SA   ++ GM  +L + I  AR     R+   G  L    ++++ +AD
Sbjct: 278 P------FTCLNSARYGIAWGMTGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLAD 331

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              D A  T    ++    D+ ++  E       M  + K   C  A        E  GG
Sbjct: 332 AVSDAAFGTLACVQVGRLKDKGEAAPE-------MISMIKRQNCDAALRNARTLQEIFGG 384

Query: 422 SGYIEERSIARH 433
           +   +E  I RH
Sbjct: 385 NAASDEYGIGRH 396


>gi|150024452|ref|YP_001295278.1| glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
 gi|149770993|emb|CAL42460.1| Glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
          Length = 392

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 40/260 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ +  + + D  Y L+G K W  ++P +D  ++ A
Sbjct: 125 PKLATGEFIGCFGLTEPNYGSDPGSMITNYKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           +  EGR+   +V R +E     G       NK   R++AT EL F N       LL + +
Sbjct: 184 KNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKANLLPNKS 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPV---- 354
               P      L  LDSA   ++   +  A      A+ YA+ R     I  D+P+    
Sbjct: 239 GLGAP------LGCLDSARYGIAWGAIGAAMDCYDTALRYAKER-----IQFDKPIAGTQ 287

Query: 355 -MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             ++ +A++  +I  A  L++RL    +E ++ + + + A       K     MA  +  
Sbjct: 288 LQQKKLAEMITEITKAQLLTWRLGVLRNEGRATTAQISMA-------KRNNVDMAINIAR 340

Query: 414 EAMECIGGSGYIEERSIARH 433
           EA + +GG G   E SI RH
Sbjct: 341 EARQILGGMGITGEYSIMRH 360


>gi|313106647|ref|ZP_07792869.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879371|gb|EFQ37965.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 32/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   +   G Y L+G K F++ +P +  + ++A+ +      G + 
Sbjct: 124 LTEPDSGSDAASLKTTAMR-DGGHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G    
Sbjct: 183 AFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   + 
Sbjct: 237 MKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAEA 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI 
Sbjct: 294 YAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYIG 346

Query: 427 ERSIARHYRE 436
           +  I R YR+
Sbjct: 347 DYGIERFYRD 356


>gi|91214963|ref|ZP_01251935.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
 gi|91186568|gb|EAS72939.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
          Length = 392

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 42/305 (13%)

Query: 142 LMAQLEAGH--LMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           +M ++E G   + S +   +S+V        T    K + PK+ S E+  +         
Sbjct: 85  IMQEIERGDSGVRSTASVQSSLVMFPIYEFGTEEQRKKFLPKLASGEFMGS--------- 135

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRV 253
                GLTE   G++ + +T+      D  Y L+G K W  +SP  D  ++ A+  EGR+
Sbjct: 136 ----FGLTEPDHGSNPSGMTTHFVDKGDH-YLLNGAKMWISNSPFCDIAVVWAKNEEGRI 190

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +V R +E     G       NK   R++AT EL F +     +   N+  G      
Sbjct: 191 HGLIVERGME-----GFSTPETHNKWSLRASATGELIFQDV---KVPKENLLPGKSGLGA 242

Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L+ LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  
Sbjct: 243 PLLCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAGYQLQQKKLAEMITEITK 302

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+ RL    +E K+ + + + A       K    +MA  +  E+ + +GG G   E 
Sbjct: 303 AQLLALRLGQLKNEGKASTAQISMA-------KRNNVEMAIHIARESRQILGGMGITGEY 355

Query: 429 SIARH 433
           SI RH
Sbjct: 356 SIMRH 360


>gi|114565939|ref|YP_753093.1| hypothetical protein Swol_0384 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336874|gb|ABI67722.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 612

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 62/361 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--- 252
           LTE   G+D+  I S+     D  I+ + G+K F+++  +D       + LA++EG    
Sbjct: 167 LTEPSAGSDVGDILSKAYPTDDPRIFKIKGNKIFITAGDNDFTENIIHLYLARIEGARPG 226

Query: 253 ---VGCFLVPRLL--EDGSPNGLCYQR--LKNKIGNRSNATVEL---EFSNTFGFLLG-D 301
              +  F+VP+    EDGS +   +Q   +++K+G   + T  L   E     G+LLG D
Sbjct: 227 TGGISLFVVPKYWVNEDGSLSDNDFQTTGVEHKMGQAGSVTAALAAGENDGCRGWLLGND 286

Query: 302 LNVSTGPVEDM-KILIYLDSAIMSVSGMRVS-LAEAIHYAR---RRHVSGGIL------- 349
                G  + M ++   ++ A M    M +S +  A   AR   +  V G +L       
Sbjct: 287 PREHEGKGQGMAQMFQMMNLARMETGHMALSCIINAFCNARDNAKERVQGRLLTNPKAGR 346

Query: 350 ---IDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPIT 400
              I+   +KR +      I A  A+ +R+  +FD+       + R   +    I  P+ 
Sbjct: 347 VAIINHEDIKRTLLMGKAHIEAMRAMLYRVYLAFDQRERDPDPEVRKAASDLIEITTPLC 406

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458
           K +       +I+EA++  GG GY EE  +A+  R+    SI  G+     +D++   + 
Sbjct: 407 KAYPSDEGWWLISEAIQSYGGYGYCEEYPVAQIARDMKIYSIWEGTNYIQSMDLVGRKMQ 466

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
            KG +LF                     +++ +  C+ +KG A  L+++ A+   A   Y
Sbjct: 467 MKGGSLFGAW------------------VKEMVDFCEANKGNAA-LSKEFAILDKALKAY 507

Query: 519 R 519
           +
Sbjct: 508 Q 508


>gi|254419831|ref|ZP_05033555.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196186008|gb|EDX80984.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 49/302 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           T    + W P + S E             V   + +TE   G+D+ AI +    I DG  
Sbjct: 110 TEEQKRRWLPGMVSGE-------------VITAIAMTEPGAGSDLQAIKTTA--IRDGDE 154

Query: 226 YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K ++++  + D  I+ A+ +   G   V  +L +    G    R  +KIG R+ 
Sbjct: 155 YVIQGSKTYITNGQTADLIIVAAKTDPAAGAKGVSLILVEADRVGFARGRKLDKIGQRAA 214

Query: 285 ATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            T E+ F+                F  L+ +L     P E ++I      A+ + +G + 
Sbjct: 215 DTSEMFFNEVRVPVSNLIGEEGRGFSMLMNNL-----PQERLQI------AVKAQAGAQR 263

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +  EA+ Y + R   G  + D       +AD+   + A  A         D    R    
Sbjct: 264 AFDEAVKYTKERPAFGKTVFDFQNTSFQLADLKSKLQAGWA-------HIDWCVERHIGG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   K +  ++  AV   A++  GG+GY+ E  IAR +R++    I  G+   M
Sbjct: 317 RLDAAQASAAKLFHTELQWAVCDAALQMHGGAGYMNETPIARLWRDARVQRIYGGTSEIM 376

Query: 451 VL 452
            L
Sbjct: 377 KL 378


>gi|184159533|ref|YP_001847872.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183211127|gb|ACC58525.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509443|gb|ADX04897.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519464|gb|ADX93845.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 387

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 12/257 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A    + K +  E     +   + K    +        A++ +GG G++      R 
Sbjct: 304 EETAWKMTQPKLQGPELV---VQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI 360

Query: 434 YRESPANSILLGSGNAM 450
           YRE   N I  G+   M
Sbjct: 361 YREVKVNMIGGGAEEIM 377


>gi|108757129|ref|YP_631256.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108461009|gb|ABF86194.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 383

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 20/272 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           AP  +      LG+TE   G+D+A + +  ++  D  Y L+G K ++++ +   F++LA 
Sbjct: 116 APAIRGEKIGALGITEPDAGSDVAGLRTTARREGDS-YVLNGSKTYITNGVRADFVVLAV 174

Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                 G  G  +V  ++E G+P G    R  +K+G R++ T EL F +        L V
Sbjct: 175 KTDPSAGHKGLSMV--VVEKGTP-GFSVGRKLDKLGWRASDTAELFFEDCRVPAENLLGV 231

Query: 305 -STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G  + M    +  L  A+ +V  M   L   +   + R   G  L    V++  +A+
Sbjct: 232 EGQGFAQIMGNFQWERLSLALGAVGAMEDMLETVLAQVKSRRAFGQSLHQFQVVRHKLAE 291

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +     +A  L++         +    + + A+ +A  T   CC++A     E ++  GG
Sbjct: 292 LFTARESARQLTYHALRLHVAGEWAVAQTSMAKKVATET---CCRVAD----ECLQLHGG 344

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +GY+ E  I RH+R++    I  G G + V++
Sbjct: 345 AGYMMEYDIQRHWRDARLGPI--GGGTSEVMN 374


>gi|148553574|ref|YP_001261156.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498764|gb|ABQ67018.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 22/258 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y +SG K F+S    +   ++    G  G   +  L
Sbjct: 126 LTEPGSGSDAAALKTRAVRDGDD-YVVSGSKAFISGGGENEVYVVMVRTGEDGPKGISCL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320
           + D    G+ +   + K+G  S  T ++ F    G  +   N   G  E  +I ++ LD 
Sbjct: 185 VIDKDMPGVSFGAQEKKLGWHSQPTAQVNFD---GVRVPVANRVGGEGEGFRIAMMGLDG 241

Query: 321 AIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +     S+ G +  L E++ Y R R   G  + D   ++  +AD+  ++ AA  L + 
Sbjct: 242 GRLNIGACSLGGAQRCLDESVSYTRERKQFGQPIADFQSIQFTLADMETELQAARMLLYA 301

Query: 376 LANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            A         K+R          A + K +      AV+  A++  GG GY+ +  I R
Sbjct: 302 AAAKVTANAPDKTR---------FAAMAKRFATDTGSAVVDRALQLHGGYGYLRDYPIER 352

Query: 433 HYRESPANSILLGSGNAM 450
            +R+   + IL G+   M
Sbjct: 353 FWRDLRVHRILEGTNEIM 370


>gi|28210432|ref|NP_781376.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28202869|gb|AAO35313.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K       GLTE   GTD A   S    + D  Y L+G K F+++  ++D  ++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDAAGQQSVAIDMGDH-YLLNGSKIFITNGGVADVAVVFAM 171

Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +   G   +   +LE G P G    ++++K+G R+++T EL F         D+ V   
Sbjct: 172 TDRSKGTRGISAFILEKGMP-GFSVGKVEDKMGIRASSTTELIFE--------DVKV--- 219

Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353
           P E++  K       A+ ++ G R+ +A            EAI Y + R   G  L    
Sbjct: 220 PKENLIGKEGRGFGIAMKTLDGGRIGIASQALGIAEGALEEAITYMKERKQFGRELYKFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+ + I +A  L ++ A         SEEAA A++ A         +A  V  
Sbjct: 280 GLSWMMADMKVAIESARLLVYQAAWKKQNKLPYSEEAAMAKLHA-------ANVAMDVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + ++  GG GY ++  + R  R++    I  G+
Sbjct: 333 KVVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365


>gi|167847060|ref|ZP_02472568.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           B7210]
 gi|254194820|ref|ZP_04901250.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|169651569|gb|EDS84262.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
          Length = 395

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  +       P   T   IG  GLTE   G+D  ++ ++ +K+  G Y LSG K W  +
Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVLGG-YSLSGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           +P++D F++ A+++      +   +LE G   GL    +  K+G R++ T E+     F 
Sbjct: 173 APIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348
               +L  +    GP         L+SA   ++   +  AE+  +  R++V      G  
Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I        RL    DE  +  E       +  I K   C  A
Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363


>gi|330502940|ref|YP_004379809.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917226|gb|AEB58057.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 20/267 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+      +K+G RS+ T ++ F N      + +G      G    M++L
Sbjct: 182 SLIVVPMKTPGVSVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIG----HEGAGFMMQML 237

Query: 316 IYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + +  +      + G+   +   I Y ++RH  G  LID  V+   +A++  +I A  A
Sbjct: 238 QFQEERLFGAANMIKGLEHCVDTTIDYCKQRHTFGQPLIDNQVIHFRMAELQTEIEALRA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++    + + +  ++ A+ A++ A        ++   V    ++  GG G++ +  ++
Sbjct: 298 LVYQATEQYVKGRDVTKLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVS 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR+    SI  G+   M+  +  L+
Sbjct: 351 RAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|255036761|ref|YP_003087382.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254949517|gb|ACT94217.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 388

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 22/255 (8%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVP 259
           GLTE   G+D   + +   +  D  + ++G K F+++  S   +++    G  G      
Sbjct: 132 GLTEPNTGSDAGNMRTVAVRDGDD-WVINGSKNFITNGKSADVLVVMTRTGEPGDKHGAT 190

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             + D    G    R ++K+G R++ TVEL F +        LG+  +  G ++ +K+L 
Sbjct: 191 AFVLDADTPGFSAGRKEDKLGMRASETVELLFQDCRIPDSQRLGE--IGDGFIQSLKVL- 247

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             D   +S++ + V  A      A+ Y++ R   G  + D   +   +AD+  D  A++ 
Sbjct: 248 --DGGRISIAALGVGTAFGAYEAALAYSKERKQFGKAICDFQAIAFKLADMYTDAQASSL 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+F  A+  D  +  +       + + + KY   + A  V  +A++  GG G++++    
Sbjct: 306 LTFHAASLKDAGEKVT-------LASSVAKYHSSETAVRVANDAVQIFGGYGFVKDYPAE 358

Query: 432 RHYRESPANSILLGS 446
           + YR+S   +I  G+
Sbjct: 359 KFYRDSKLCTIGEGT 373


>gi|119503431|ref|ZP_01625514.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460493|gb|EAW41585.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++ ++  D +Y ++G K F+S       +++    G  G   +  L
Sbjct: 124 LTEPGAGSDAASLRTRAERDGD-VYRVNGSKVFISGAGDTDVLVVMTRTGDAGSKGITAL 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L      G+ Y + ++K+G  +  T       VE+  S+  G       ++   ++  +I
Sbjct: 183 LIPADAAGVNYGKKEHKMGWNAQPTRMITFDDVEVPISHRLGEEGQGFAIAMEGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  SV   + +L +A  Y   R   G  + D    +  +AD+  ++ AA  +  
Sbjct: 243 NI----ATCSVGTAQQALEDAQAYVSDRKQFGQAIADFQNTQFKLADMVTELVAARQMIR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+  D   S+      A     + K +   +   V  +A++  GG GYI E  + R+ 
Sbjct: 299 LAASKLDAGDSQ------ASTYCAMAKRFATDVGFKVCNDALQLFGGYGYIREYPVERYV 352

Query: 435 RESPANSILLGSGNAM 450
           R++  + IL G+   M
Sbjct: 353 RDTRVHQILEGTNEVM 368


>gi|311108992|ref|YP_003981845.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763681|gb|ADP19130.1| acyl-CoA dehydrogenase, N-terminal domain protein 22 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 34/253 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA----QVEGRVG 254
             LTE + G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A    Q  G  G
Sbjct: 122 FALTEPQAGSDATALRTTAVRDGDH-YVLNGEKCFITNAPLAGLFTVMARTDPQAPGAKG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307
             +   ++E G+P GL   +  +K+G   +    + F       +N  G   G L   T 
Sbjct: 181 --ITAFIVERGTP-GLSTGQPYDKMGQAGSPVSSVHFQDCRVPAANIIGGQEG-LGFKTA 236

Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               MK+L    I+L +A+     MR+ L + + +   R   G  L+D  +++  +AD  
Sbjct: 237 ----MKVLNKQRIHL-AALCIGPAMRM-LDDTLRFVAERQQFGKPLMDFQLIQAMLADCQ 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA AL  + A   D         A   + A I KY+  +M   V    ++  GG G
Sbjct: 291 TEIQAARALVLQTARERDAG-------ADVTLNASICKYFASEMCGRVADRCVQMHGGYG 343

Query: 424 YIEERSIARHYRE 436
           YI +  I R YR+
Sbjct: 344 YIADHGIERFYRD 356


>gi|295690196|ref|YP_003593889.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432099|gb|ADG11271.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 37/289 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+  +             L ++E   G+D+ ++  + ++  D  Y
Sbjct: 110 TPEQKRRYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQRGD-RY 155

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+G K W  ++P +D  ++ A+  EG  G   FLV + ++     G    +  +K+G R
Sbjct: 156 VLNGTKFWITNAPHADTLVVYAKTGEGTRGITAFLVEKGMK-----GFSVSKKLDKMGMR 210

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD--SAIMSVSG---MRVSLAEAIH 337
            + T EL F +    +  D  +         ++  LD   A+++      M+  L   + 
Sbjct: 211 GSDTAELVFEDCE--IPEDNVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDIVLP 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  +    +M+  +AD+ + +++A A  + +A + D  K+   +AA A +MA
Sbjct: 269 YVRDRKQFGQPIGGFQLMQGKVADMYVALSSARAYVYAVARACDAGKTTRFDAAGAILMA 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 329 -------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 370


>gi|163740791|ref|ZP_02148184.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           2.10]
 gi|161385782|gb|EDQ10158.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           2.10]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           A  +F  +       P+ ++  AI    LTE + G+D+A   S    + DG  Y L+G K
Sbjct: 99  AISLFGTQAQQAEWLPLTRSGKAISAFALTEPQSGSDVA--NSTMTAVRDGEHYVLNGEK 156

Query: 233 -WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  +  ++D + + A+  EG     +  F+VP     G P     +RL+  +     AT
Sbjct: 157 TWISNGGIADVYTLFARSGEGPGAKGLSAFVVPA----GLPGLEVVERLET-LAPHPLAT 211

Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARR 341
             L FS+       LLG      G    M +L    S + + + G  R +L EA+     
Sbjct: 212 --LRFSDCRIPRSALLG--APGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTS 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPIT 400
           RHV G  L D  +++  IAD+ALD+ A+  L +R A + D   +R + EAA A       
Sbjct: 268 RHVQGAPLADLQMVQGHIADMALDVDASALLVYRAAWAKDSGAARITREAAMA------- 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           K +    A  +I +A++  GG G  + + +   YR+  A  I  G+ +
Sbjct: 321 KLFSTDQAQKIIDKAVQLHGGDGVRQGQKVEELYRDIRALRIYEGASD 368


>gi|34540558|ref|NP_905037.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis
           W83]
 gi|188994663|ref|YP_001928915.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC
           33277]
 gi|34396871|gb|AAQ65936.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis
           W83]
 gi|188594343|dbj|BAG33318.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC
           33277]
          Length = 573

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +     +DG + L+G K F+++  S   ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEADGCWYLNGVKRFITNGDSHIHLVLARSEEGTTDA 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R +NK+G +   T EL F N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDHRDGGVTVRRTENKMGIKGAPTCELVFKNAKAELCGDRKM--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YA-RRRHVSGGILIDQPVMK-----RAIADIAL 364
             ++ A + +    V L+EA       YA  R+     I+   PV +     RA AD + 
Sbjct: 287 ALMNGARLGIMAQSVGLSEAAFREAHSYALDRKQFGKPIIAFAPVYEMLSLIRAKADASR 346

Query: 365 DIAAATALSFRLANSFD----EAKSRSEEAA----YARI---MAPITKYWCCKMAPAVIA 413
            +   T+    +    +    E K  SEE A    ++R+     P+ K    + A   + 
Sbjct: 347 AMLYETSRFVDMYKVLEDISHERKLTSEERAEMKHFSRLADAYTPMGKGMTSEFANQNVY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++++ +  R YR+    +I  G+    V+  +  +  GT
Sbjct: 407 DCVQIHGGSGFMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHITTGT 455


>gi|304409873|ref|ZP_07391492.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307302420|ref|ZP_07582178.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304351282|gb|EFM15681.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306914458|gb|EFN44879.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 389

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  + L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|258591419|emb|CBE67718.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257
             L+E   G+D +A  +  ++  DG + L+G K F+++ + +D  ++ A V+ G     +
Sbjct: 123 FALSEPGAGSDASAQQTLVKRDGDG-FVLNGTKNFITNALEADLALVFATVDRGLRAKGV 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              L+E G+P G    +++ K+G    +  ++ F +       LLG++       +  KI
Sbjct: 182 YALLVEKGTP-GFTITKVEKKLGLHGTSCCQVVFEDCRVPSDNLLGEMG------QGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIA 363
            ++ LD+  + ++   V +A+A     I YA+ R     +  D+P+     ++  IAD+A
Sbjct: 235 AMVTLDAGRIGIAAQAVGIAQAALDISIRYAKER-----VAFDKPIASFQAIQWMIADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L++R A   D+    ++E+A A++ A  T       A     +A++  GG G
Sbjct: 290 AQIEAARLLTYRAAWLKDKGLRHTKESAMAKLFASET-------ANRAATKALQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+ +    R +R++    I  G+
Sbjct: 343 YLYDFPTQRLFRDARITEIYEGT 365


>gi|284031326|ref|YP_003381257.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810619|gb|ADB32458.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 443

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 142/332 (42%), Gaps = 51/332 (15%)

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +AG  MS + T  +  A+ +  TP     W P+ +    D    A             +E
Sbjct: 113 DAGIGMSLTGTGLASSAIFSNGTPEQWSQWLPRCYGTPDDVKVAA----------FCSSE 162

Query: 205 KRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFL 257
              G+D++AI ++       G + ++G K W  +  ++D  +++A V+  +G      F+
Sbjct: 163 PGAGSDVSAIRTRATYDEKTGEWVINGQKAWATNGGIADIHVVVATVDPSLGTKGQAAFV 222

Query: 258 VP----RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DLNVSTG 307
           VP    R LE G+       +LK K G R++ T ++ F N       +LG    L+    
Sbjct: 223 VPKSEVRGLEQGT-------KLK-KHGLRASHTADVFFDNVRIPAENVLGGKEKLDARLA 274

Query: 308 PVEDMKILIYLDSAIMSVSGM-------------RVSLAEAIHYARRRHVSGGILIDQPV 354
              + +      +A M+   M             R +   A+ YA+ R   G  +ID   
Sbjct: 275 KAREPRDGQRARNASMATFEMTRHIVGAQAIGIARAAYEFALEYAKGREQFGRPIIDNQG 334

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A++I AA  L +R AN    A  R E   Y      + K    ++A  V  E
Sbjct: 335 IAFKLADMAMEIDAARLLVWRAAN-MSSALMRGESPNYRHGEGSMAKLKAGEVAVKVTEE 393

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ +GG+GY  E  + R +R++   +I  G+
Sbjct: 394 AIQILGGNGYTREYPVERMHRDAKIYTIFEGT 425


>gi|192292303|ref|YP_001992908.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286052|gb|ACF02433.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 22/262 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L
Sbjct: 128 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTL 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           + +    GL +   + K+G  +  T  + F N        LGD  +        KI +  
Sbjct: 187 VVEKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 240

Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L+    S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L
Sbjct: 241 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A + D       + A A  +  + K +       V  EA++  GG GY+ E  I +
Sbjct: 301 LWRAAAALDR------KDADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEK 354

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R+   + IL G+   M L V
Sbjct: 355 IVRDLRVHQILEGTNEIMRLIV 376


>gi|85706529|ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85668941|gb|EAQ23809.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 388

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 33/321 (10%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKR 206
           +++  V  ++      T  VH D A         P  KA   P   +   I  + +TE  
Sbjct: 80  VLAEEVGRSTFGGFSATVLVHTDMASPHLENAGSPEQKARWMPSITSGEKIAAVAVTEPG 139

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE----GRVGCFLVPR 260
            G+D+A + ++   + DG  + ++G K F+++ +  D + + A+ +    G  G  +   
Sbjct: 140 AGSDVAGMRTRA--VQDGSDWVINGTKMFITNGVHGDIYFVGAKTDPDAKGSRGITMFA- 196

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMK 313
            +E G+P G    R  NK G   + T EL F +       +LG++N     V    ++ +
Sbjct: 197 -VEKGTP-GFSVGRALNKTGWLCSDTAELIFEDVRIPAENVLGEVNRGFYSVMKNFQNER 254

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I++      M+ +  + +L   + Y ++R   GG+L D+  +++ +AD    I A   L 
Sbjct: 255 IVL----GAMACAEAQSALEMTVDYVKQRKAFGGVLWDKQTVRQRLADCQTRIEAGRQLI 310

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A+     +   +E +       + K +C ++  +V+ + ++  GG GY+ E  + R 
Sbjct: 311 YHAASLDAAGRDCVKEVS-------MVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERM 363

Query: 434 YRESPANSILLGSGNAMVLDV 454
            R++   +I  G+   M+ +V
Sbjct: 364 SRDARVQAIGGGATEVMLEEV 384


>gi|319950686|ref|ZP_08024587.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435669|gb|EFV90888.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+       + 
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYILNGAKTFITGGVHADRVIVCARTAPPREDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L   L    S  G    R  +K+G +++ T EL F+        D+ V   PVED
Sbjct: 184 RFGISL---LAVQTSLEGYSVGRKLDKVGLKTSDTAELSFT--------DVKV---PVED 229

Query: 312 M-----KILIYLDSAIMS---------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     +   YL   + S          +    ++  A  Y ++R V G  +      K 
Sbjct: 230 LLGEENRGFSYLGQNLPSERWGIAFGAYAQAAAAVRFAKEYTQQREVFGKPVAAFQNTKF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A     + AA A++ R   + D  +  + EAA A++       +C ++A  VI   ++
Sbjct: 290 ELASCQAKVDAAQAVADRALEALDAGELTAAEAASAKL-------FCTEVAAEVIDRCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG G+I E  IAR Y ++  N I  G+   M
Sbjct: 343 LHGGYGFINEYPIARLYSDNRVNRIYGGTNEVM 375


>gi|227536311|ref|ZP_03966360.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243918|gb|EEI93933.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 449

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 32/275 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLS 229
            ++W PK             MQK  V    GLTE   G+  A  +T+  QK   G + L+
Sbjct: 175 KQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQG-WVLN 220

Query: 230 GHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           G K W  +S  SD  I+ A+   +G V  F++ +     +P G   +++K K+  R    
Sbjct: 221 GQKKWIGNSTFSDITIVWARDLDDGEVKGFIIRK----DTP-GFEVEKIKGKMALRIVQN 275

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHV 344
             +  +N        L  +    +  K+L    + +  M+V   R +   A+ Y R+R  
Sbjct: 276 GLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQ 335

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +++  + ++  ++ A   L FRL+   D  + + E A+ A++       +C
Sbjct: 336 FGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV-------FC 388

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                 ++++A E +GG+G + E ++AR   ++ A
Sbjct: 389 SLRTRDIVSKAREVMGGNGILLEYNVARFLADAEA 423


>gi|225867324|ref|YP_002752702.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|225786168|gb|ACO26385.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D  ++ S+  K  D  Y ++G K F+++   +  +I+ A      G   +
Sbjct: 127 FALTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    GL   + ++K+G   + TV+L F         D+ V   P E++      
Sbjct: 186 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 234

Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +  LD   + +    + +AEA     I+YA+ R      +  Q  +   +AD+A 
Sbjct: 235 GFKVAMANLDVGRIGIGAQALGIAEAALACAINYAKEREQFEKPIAAQQGIGFKLADMAT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R A+   +     +EA+       I K +  K A  V  EA++  GG GY
Sbjct: 295 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 347

Query: 425 IEERSIARHYRESPANSILLGS 446
            ++  + R +R++    I  G+
Sbjct: 348 TKDYPVERFFRDAKITQIYEGT 369


>gi|188590910|ref|YP_001795510.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937804|emb|CAP62788.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 376

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE   G+D AA+ +   +  D  Y L+G K F++S   +D  I+LA 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTSAVRDGDH-YVLNGVKQFITSGQNADVAIVLAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP      S  G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----STPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
              G   ++   +E  +I I    A  S+   R +   A+ YA+ R   G  L     ++
Sbjct: 225 DEGGGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +  A   D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHAAALRDAGRQCLKEAAMAKLFA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|126731614|ref|ZP_01747419.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
 gi|126707780|gb|EBA06841.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 122/282 (43%), Gaps = 37/282 (13%)

Query: 185 PTNKA---PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           P  KA   P+ +   AI    LTE   G+D+AA T     +    Y L+G K W  +  +
Sbjct: 105 PEQKADWLPLTRAGKAISAFALTEPGSGSDVAANTMSA-TLDGNHYVLNGQKTWISNGGI 163

Query: 240 SDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +D + + A+     G      F+VP      +P     +RL+  I     AT+      T
Sbjct: 164 ADVYTVFARTGEAPGAKGMSAFIVPA----DTPGLEITERLQT-IAPHPLATL------T 212

Query: 295 FGFLLGDLNVSTG-PVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F  L        G P +  +I +  LD      A  ++   R +L EA+     R + G 
Sbjct: 213 FNDLRVPATAMIGEPGQGFRIAMSVLDVFRSTVAAAALGFARRALDEALARVTTRQIQGA 272

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCK 406
            L D  +++  IAD+ALD+ AA  L +R A + D    R + EAA A++ A         
Sbjct: 273 PLFDLQMVQGHIADMALDVDAAALLVYRAAWTKDSGAPRVTREAAMAKLFA-------TD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A  +I +A++  GG G     ++ + YRE  A  I  G+ +
Sbjct: 326 QAQHIIDKAVQLHGGDGVKSHETVEKLYREIRALRIYEGASD 367


>gi|146278761|ref|YP_001168920.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145557002|gb|ABP71615.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 403

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 28/255 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A + +  +K + G Y L+G K W  ++P++D F++ A
Sbjct: 134 PGLATGALIGCFGLTEPDAGSDPAGMKTTARKTATG-YVLNGSKMWISNAPIADVFVVWA 192

Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + E   G++  F    +LE G   GL   ++  K+  R++ T E+   +     +G+  +
Sbjct: 193 KSEAHGGKIRGF----VLEKGM-KGLSAPKIGGKLSLRASITGEIVMDSV---EVGEEAL 244

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRA 358
             G VE +K     L+ A   +S   +  AEA +H AR+    R   G  L    + +  
Sbjct: 245 LPG-VEGLKGPFGCLNRARYGISWGVLGAAEACLHAARQYGLDRKQFGRPLAQTQLYQLK 303

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  DIA     S R+    DEA +  E       M  I K   C  A      A + 
Sbjct: 304 LANMMTDIALGAQASLRVGRLLDEANAAPE-------MISIVKRNNCGKALEAARHARDM 356

Query: 419 IGGSGYIEERSIARH 433
            GG+G  E+  + RH
Sbjct: 357 HGGNGIQEDFHVMRH 371


>gi|319653539|ref|ZP_08007638.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2]
 gi|317394738|gb|EFV75477.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2]
          Length = 537

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 146/360 (40%), Gaps = 48/360 (13%)

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+  L+ QL    +  P   +  ++AL+             +  E  P  +  +Q T   
Sbjct: 126 AKRMLIHQLGEAGVACPLTCTIGLIALLEQ-----------YPNEDIPELEQILQHTKEG 174

Query: 198 IG----LG---LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV 249
           +G    +G   +TE +GG+D+ A   +   + DG  Y L G+K+F S   +D  ++ A++
Sbjct: 175 LGGDFAIGAQFMTEIQGGSDLPANVLEA--VPDGKNYRLYGNKFFCSVAHADYSVVTAKI 232

Query: 250 EG--RVGCFLVPRLL----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--- 300
            G  +V  F+VP  L    E    NG    R+K K+G     T E +++    + +G   
Sbjct: 233 SGTDKVSTFIVPSWLPGDKEIEKRNGYEINRIKWKMGTAELPTGEFQYNGALAYPVGPAG 292

Query: 301 -DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             + V+ G V     L  L+  I     M  +  EA  Y   R V G  + D P+  R +
Sbjct: 293 KGVAVAVGIV---LTLSRLEIGIACAGFMLRAAREASLYGNFRTVFGKKVKDYPLSARTL 349

Query: 360 ADIALDIAAATALSFRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCK 406
             I        A +F++ + F             D+     ++    R +  + K     
Sbjct: 350 KKIENAAHRTAAGAFKIYDQFLLLDQPLSAGIPVDQPIELRKQLFNLRELVLLQKICATN 409

Query: 407 MAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
               V+ +A+    G G +EE  S+ R +R+   N    G  N ++  +   +++ T+ +
Sbjct: 410 EGAEVLRDAISVFAGHGVMEEFSSLPRIFRDIVVNEQWEGPRNLLLTQIYRDIQRVTDWY 469


>gi|294338708|emb|CAZ87040.1| glutaryl-CoA dehydrogenase(GCDH) [Thiomonas sp. 3As]
          Length = 393

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D   ++++ + +  G Y L+G+K W  +SP++D F++ A+ + G +  F+
Sbjct: 138 FGLTEPDHGSDPGGMSTRARAVPGG-YALTGNKMWISNSPIADVFVVWAKDDAGEIRGFV 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +     D    GL    L  K+G R++ T E+     F         +    GP      
Sbjct: 197 L-----DKGAKGLSAPALHGKVGLRTSITGEIVMDQVFCPEENAFAQVRGLKGP------ 245

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A DI+  
Sbjct: 246 FTCLNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLIQKKLADMATDISLG 305

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    D+  +  E       +  + K   C  A  +   A + +GG+G  +E  
Sbjct: 306 LQGVLRLGRMKDDGTAAPE-------VTSLLKRNNCGKALDIARTARDMLGGNGISDEFG 358

Query: 430 IARH 433
           +ARH
Sbjct: 359 VARH 362


>gi|85375125|ref|YP_459187.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788208|gb|ABC64390.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 394

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE  GG+D+A + ++ ++  D  Y ++G K  ++S M   FI LA   G  G   
Sbjct: 138 ICLGITEPGGGSDVAQLKTKAERRGD-HYVVNGAKTLITSGMRADFITLAVRTGGDGMGG 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL +    G+    L+ K+G  S+ T  +   +       L+G+ N   G +     
Sbjct: 197 ISLLLVETDRPGVSRTPLQ-KMGWHSSDTATIHLDDVEVPAENLIGEENHGFGGIMRNFN 255

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  + +  R+   +A+ +AR R   G  L+ +  ++  +A +   I A  A+  
Sbjct: 256 GERLGMAQQAAAYARLCYEDALDWARERETFGRPLVTRQAIRHKLARMLQMINATQAMID 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A +  E  +   + A  ++ A  T  +C +       EA + +GG+ ++    + R Y
Sbjct: 316 HAAWTVKEDCAFPGDFALLKVQATQTMEYCAR-------EACQIMGGASFVRGNRVERIY 368

Query: 435 RESPANSILLGSGNAM 450
           RE    +I  GS   M
Sbjct: 369 REVRVMAIGGGSEEIM 384


>gi|325277761|ref|ZP_08143322.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324097099|gb|EGB95384.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 589

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 114/301 (37%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ +   A  + LTE   GTD+  I S+ +  +DG Y ++G K F++    D       +
Sbjct: 154 PLYQGRWAGTMCLTEPHAGTDLGLIRSRAEAQADGSYRITGSKIFITGGEQDLTENIIHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP+ L D     G  N      +++K+G +++AT  + F  
Sbjct: 214 VLAKMPDAPAGAKGISLFLVPKFLVDANGRLGERNAAHCGSIEHKMGIKASATCVMNFDA 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGIL 349
             G+L+G  N     +  M     L   I  +     S   A  YA  R  S    G  L
Sbjct: 274 ATGYLVGAPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQAAARYANERLQSRAAVGPQL 333

Query: 350 IDQ---PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            D+   P++            R + +     AA       +A   +    R +      +
Sbjct: 334 RDKAADPIIHHGDVRRMLLTMRTLTEGGRAFAAYVGQQLDVARYAEAGSEREQAQRMVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|225683417|gb|EEH21701.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 433

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDAGSKGI 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     +LG++N        +K+L
Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFDDVFVPQENVLGEVN------RGVKVL 276

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R      +    +++  +AD+   ++A+
Sbjct: 277 MEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQFDAPIAHNQLIQGKLADMYTKLSAS 336

Query: 370 TALSFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A ++  A   D+A     +RS  A   +  A    Y   + A     +A++ +GG+GY+
Sbjct: 337 RAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAILY-AAERATECALDAIQLMGGNGYV 395

Query: 426 EERSIARHYRESPANSILLGS 446
            E    R  R++    I  G+
Sbjct: 396 NEIPAGRLLRDAKLYEIGAGT 416


>gi|254466611|ref|ZP_05080022.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687519|gb|EDZ48001.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-FRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +    F  +LG+        + +++L
Sbjct: 187 TAFLIEKEMKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   + E + Y   R   G  + +  +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMASCMDEMMPYMAERKQFGQPIGNFQLMQAKIADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYI 425
            A  + +A S D      ++AA            CC  A  V      +A++  GG+GY+
Sbjct: 301 RAYVYEVAKSCDNGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYL 349

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R +R++    I  G+
Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370


>gi|282863870|ref|ZP_06272928.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282561571|gb|EFB67115.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 608

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 53/313 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  +  DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWTTGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316

Query: 335 AIHYARRRHVSGGIL---IDQ----------PVMKRAI------ADIALDIAAATALSFR 375
           A+ YA+ R V G  L   +D+          P ++RA+      A+    +   TA S +
Sbjct: 317 ALEYAKER-VQGTDLSQFMDKTAPKVTITHHPDVRRALMTQKAYAEGMRSLVMYTA-SVQ 374

Query: 376 LANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A    EA     +A +    ++ PI K +  + +   +A++++  GGSGY++E  I ++
Sbjct: 375 DAIQVKEAAGEDSKALHGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQY 434

Query: 434 YRESPANSILLGS 446
            R++  +++  G+
Sbjct: 435 IRDAKIDTLYEGT 447


>gi|119477415|ref|ZP_01617606.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119449341|gb|EAW30580.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 389

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P +D +++ A+ + + G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLAAKKQGD-RYILNGNKMWITNGPDADTYVIYAKTDVKAGPKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + N+     E +++L+  
Sbjct: 189 TAFIVERDFPGFSRSPKLDKLGMRGSNTCELVFQDC---EVPEENILGREGEGVRVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG     M+  + + + Y   R   G  + +  +M+  +AD+  ++ A+ A 
Sbjct: 246 LDFERTVLSGGPVGIMQACMDQVVPYIHDRKQFGQSIGEFQLMQGKVADMYTELNASRAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA A I+      +  + A  +  +A++ +GG+GYI +   AR
Sbjct: 306 LYAVAKACDRGEESRKDAA-AVIL------FTAEKATQMALQAIQALGGNGYINDFPTAR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|126175033|ref|YP_001051182.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125998238|gb|ABN62313.1| isovaleryl-CoA dehydrogenase [Shewanella baltica OS155]
          Length = 389

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  + L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|322496604|emb|CBZ31674.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 416

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 17/249 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  +++ + +LA+ EG    F+V  
Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILIYLD 319
              D    G+   + +  +G R + T  + F N        +  +  G    MK+  +  
Sbjct: 221 ---DADTPGVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTR 277

Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           SA+ +S  G+ R +  EA  YAR R   G  +     +   +A++A  + A   +++R  
Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +  +  A+ A++MA         +A      A++  GG+GY     + + YR+ 
Sbjct: 338 WETDQGRRNTYYASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390

Query: 438 PANSILLGS 446
              SI  G+
Sbjct: 391 KIFSIYEGT 399


>gi|319762133|ref|YP_004126070.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317116694|gb|ADU99182.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 398

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 25/266 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172

Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A +VE       +   + D    GL    +  K+G R++ T E+   + F
Sbjct: 173 SPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 233 VPEENAFPEIRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +IA     + R+    DE ++  E       +  + K   C  
Sbjct: 287 PLAANQLIQKKLADMQTEIALGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365


>gi|254481256|ref|ZP_05094501.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038419|gb|EEB79081.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D  ++ +   +  D  Y ++G K F+S       +++    G  G   +  L
Sbjct: 124 LTEPGAGSDAGSLRTSAVQDGDD-YLVNGSKVFISGAGETDVLVVMLRTGEAGPKGISAL 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L      G+ Y + ++K+G  +  T       V +  +N  G       ++   ++  +I
Sbjct: 183 LIPADAQGISYGKKEDKMGWNAQPTRMVTFDNVRVPVANRLGREGQGFAIAMEGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+   + +L EA+ Y + R      + D    +  +AD+  D+ AA  +  
Sbjct: 243 NI----ATCSIGTAQQALEEAVAYVQERKQFDTAIADFQATQFKLADMLTDLVAARQMVR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+  D   S+      A     + K +   +   V  +A++  GG GYI+E  + RH 
Sbjct: 299 LAASKLDNKDSQ------ASTYCAMAKRFATDVGFNVCNDALQLYGGYGYIKEYPMERHV 352

Query: 435 RESPANSILLGSGNAM 450
           R++  + IL G+   M
Sbjct: 353 RDTRVHQILEGTNEIM 368


>gi|88859254|ref|ZP_01133894.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2]
 gi|88818271|gb|EAR28086.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2]
          Length = 382

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 123 LAMSEPNAGSDVVSMKLKAEKRGDK-YILNGNKMWITNGPDAHTYVIYAKTDLNAGAKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 182 TAFIVERDFPGFTQAQKLDKLGMRGSNTCELVFIDC---EVPEENILGGLNNGVKVLMSG 238

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + + +A     + Y   R      +    +++  IAD+   + AA + 
Sbjct: 239 LDYERVVLSGGSLGIMQACMDIVVPYIHERKQFDSPIGQFQLIQGKIADMYTQMNAARSY 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 299 VYTVAKSCDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGYINEYATGR 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 LLRDAKLYEIGAGT 365


>gi|84494342|ref|ZP_00993461.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84383835|gb|EAP99715.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 41/309 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +T+  +VA+ T  +  + W P++ + E               + +G+TE  GG+D+AA+
Sbjct: 94  DITAPYLVAMGTQEQKAR-WLPQVATGE-------------TIMSIGMTEPSGGSDLAAL 139

Query: 215 TSQGQKISDGI--YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            S   K  DG   + L+G K F+++    D  ++ A+ +   G   +   + + +  G  
Sbjct: 140 KSNAVKADDGSGDWILNGSKTFITNGYQCDLAVVAARTDPTKGAKGISLFVLEATDEGFS 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVS 326
             +  +K+G   + T EL F N       LLG   +  G +  M+ L    L +AI  ++
Sbjct: 200 KGKPLDKVGQPESDTSELFFENVRLPADRLLGPEGM--GFITMMQKLPQERLGNAIGCIA 257

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381
                L E I YA+ R   G     QP+      K  IA++   I  A A         D
Sbjct: 258 HAGQILEETIEYAKERKAFG-----QPIGSFQHNKFKIAELVTMIEVAQAY-------ID 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      E     + A   K+W  +    V+ E ++  GG GY+ E  +AR +R++  N 
Sbjct: 306 DCVVAHAEGKLTAVDAAKAKWWAAETQSKVLDECVQLHGGYGYMNEYRVARAWRDARINK 365

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 366 IWAGTNEIM 374


>gi|319943552|ref|ZP_08017834.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743367|gb|EFV95772.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 611

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 57/350 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS--PMSDAFI--MLAQVEGRVG-- 254
           ++E + G+ ++ I ++  +  DG + L G+K W +     ++D  +  +LA++E   G  
Sbjct: 160 ISEPQAGSSLSDIRTRAVRQPDGSFRLYGNKMWIVGGDHAVTDNIVHLVLARIEDDSGDI 219

Query: 255 --------CFLVPRLLE-----------DGSPNGLCYQRLKNKIGNRSNATVELEF---- 291
                    FL P+ L             G  N +    +  ++G R   +  L F    
Sbjct: 220 MPGVESLSLFLAPKYLPADTNPAEGAAGRGERNDIVAAGIYPQMGQRGATSCLLSFGEGN 279

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-- 343
                 +    +L+G+ N     V +    I +D  + + +      + A+ YAR RH  
Sbjct: 280 HLPQGQAGAVAWLVGEENAGMALVNEAAPEIQIDIGLSAAALGYAGYSHALDYARERHQG 339

Query: 344 --------VSGGI-LIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAA 391
                   V G I +I+   +KR +      +    AL     RL +  D A++ S E A
Sbjct: 340 RFPGMNSQVGGQIPIIEHADIKRMLLIQKSYVEGGLALGLWCARLMDEVDTAET-STERA 398

Query: 392 YAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            AR    +++P+ K W         + A++ +G  GY  +  + + YR++  N+IL G+ 
Sbjct: 399 RARDLLLLLSPVAKSWSAHNGLIANSLAIQVLGCYGYTRDYPVEQLYRDNRLNTILEGTH 458

Query: 448 NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
             + L+++   LL      F++    +EQ LG +  +   +   ++ L K
Sbjct: 459 GILALELMRDRLLADDFMGFQRFAHEVEQTLGRAAARCGDVRHMAVQLQK 508


>gi|254476399|ref|ZP_05089785.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214030642|gb|EEB71477.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 30/287 (10%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  +       P+ +   A+    LTE + G+D+A  T       D  Y L+G K 
Sbjct: 99  AISLFGTQAQQQEWLPLTRAGKAMSAFALTEPQSGSDVANSTMTATLDGDS-YVLNGEKT 157

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           W  +  ++D + + A+     G      F+VP     G P     +RL        +   
Sbjct: 158 WISNGGIADVYTLFARTGEAPGAKGLSAFIVPA----GLPGFEVVERLDTIA---PHPLA 210

Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRR 342
            L FS+       LLG      G    M +L    S + + + G  R +L EA+     R
Sbjct: 211 RLRFSDCRIPKSALLG--QSGQGFKIAMSVLDVFRSTVAAAALGFARRALDEALSRVSAR 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITK 401
           HV G  L D  +++  IAD+ALD+ AA  L +R A + D   +R + EAA A       K
Sbjct: 269 HVQGAPLADLQMVQGHIADMALDVDAAALLVYRAAWAKDSGSARITREAAMA-------K 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +    A  VI +A++  GG G      +   YR+  A  I  G+ +
Sbjct: 322 LFSTDQAQLVIDKAVQLHGGDGVRRGEKVEELYRDIRALRIYEGASD 368


>gi|71906179|ref|YP_283766.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71845800|gb|AAZ45296.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 391

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G+D  ++ ++ + +  G + LSG K W  S+P++D F++ A+  +G +  F 
Sbjct: 136 FGLTEPNSGSDPGSLATRARTVPGG-WKLSGSKNWISSAPIADVFVVWAKDDDGVIRGF- 193

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +L+ G P GL    +  K+G R+  T E+     F     LL  ++   GP      
Sbjct: 194 ---ILDKGMP-GLSAPVIHGKVGMRAAITGEIVMDEVFVPNENLLPGVSGLKGP------ 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAA 369
              L+SA   ++   +  AEA  +  R++       D+P     ++++ +AD+  +I   
Sbjct: 244 FTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFDKPLAANQLIQKKLADMQTEITLG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + RL    D+  +  E       +  + K   C  A  +   A + +GG+G  ++  
Sbjct: 304 IQGALRLGRMMDDGSATPE-------IVSMMKRNSCGKALDIARTARDMLGGNGISDDFG 356

Query: 430 IARH 433
           + RH
Sbjct: 357 VIRH 360


>gi|332976571|gb|EGK13412.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 34/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVE---GRVG--C 255
           LTE   G+D++ I +  QK + G Y L+G K F+++    +++++ A ++   GR G   
Sbjct: 139 LTEPEAGSDVSGIRTTAQKTTGG-YILNGQKIFITNGARASWVVVFATIDRSLGRAGHRA 197

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL---NVSTGP 308
           F+V    E G+P G    RL  K+G R++ T EL   + F      L G+    N  +GP
Sbjct: 198 FVV----EKGTP-GFSCTRLAKKMGIRASETAELLLEDCFVPEENLLGGESYYENRGSGP 252

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +   D+    V+ M + +A A     +   R+ +   G L      K A A+  
Sbjct: 253 SGFRVAMKTFDNTRPIVAAMAIGIARAAFEYTLDLVRKEYPKHGRLYHLASEKLARAE-- 310

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+I AA  L++  A   D  +S ++EAA       + K    K+A  V A  +E +G +G
Sbjct: 311 LEIEAARLLTWEAAWKADIGQSNAKEAA-------MCKAHSGKIALEVCAGCLELLGPAG 363

Query: 424 YIEERSIARHYRESPANSILLGS 446
            ++ + + + YR++    I  G+
Sbjct: 364 -LDGQIVEKLYRDAKIFDIFEGT 385


>gi|297562204|ref|YP_003681178.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846652|gb|ADH68672.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIML 246
           P   +  A+G  GLTE  GG+D  A T    ++ DG + + G K F+++  +D  A + +
Sbjct: 113 PRLTSGEALGAFGLTEPGGGSDAGA-TRTTARLEDGQWVVDGTKSFITNSGTDITALVTV 171

Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296
             V GR       +   LVP     G+P G    +  +K+G  ++ T EL F +      
Sbjct: 172 TAVTGRREDGRPEISSILVPA----GTP-GFSVGQKYSKVGWNASDTNELVFEDCRVPEA 226

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILID 351
            L+G+     G  + ++IL   D   ++++ + V LA     E++ YA  RH  G  +  
Sbjct: 227 NLVGERG--RGYAQFLRIL---DEGRIAIAALSVGLAQGCVDESVRYAHERHAFGSAIGT 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  IA++      A A + RLA  + +A SR       +  A + K      A   
Sbjct: 282 YQAIQFKIAEM-----EARAHTARLA--YYDAASRMLAGEPFKKEAAVAKLVASNAAMDN 334

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             +A +  GG G++ +  + R YR+  A  + +G G + V  +L   E G
Sbjct: 335 ARDATQVFGGYGFMNDYPVGRFYRD--AKILEVGEGTSEVQKMLIARELG 382


>gi|41056265|ref|NP_957475.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio
           rerio]
 gi|27882298|gb|AAH44447.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio]
 gi|182889740|gb|AAI65576.1| Acadl protein [Danio rerio]
          Length = 442

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 29/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+    +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGAKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E +     +   L D    G    R   K+G ++  T EL F +       LLG 
Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           +N      ++  P E + I      A+M ++       E+ +Y  +R   G  + D  V+
Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++  +I    A          E K  S  A+ A       KYW   +   V  + 
Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IA+ + ++    I  G+   M
Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430


>gi|77454839|ref|YP_345707.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|77019839|dbj|BAE46215.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 30/286 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E             V   + +TE   G+D+  I ++  +  +  Y +SG 
Sbjct: 111 QQWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAIRQGEE-YVVSGS 156

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +D  + +A+ +       +  +L   +  G    R+  KIG +   T EL 
Sbjct: 157 KTFITNGSQADLVLTVAKTDPDDKAAGISLMLVPTAAEGFSRGRVLEKIGMKGQDTSELF 216

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F N       LLG      G ++ M+ L    L  A+ +V+ M + L E + Y R R   
Sbjct: 217 FDNVRVPATSLLGHTE-GQGFIQLMEQLPQERLLVAVSNVAAMELCLTETLRYVRDRSAF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWC 404
           G  +      K  +A++A +         R+A +F DE      +       A + K WC
Sbjct: 276 GRPIWGFQNTKFKMAEVATEA--------RVARAFVDECIELHLDGELDIPTAAMAKLWC 327

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + A  V    ++  GG GY+ E  IAR + +   + I  GS   M
Sbjct: 328 SERAQRVADACLQLHGGYGYMNEYPIARAWADLRVSQIYAGSSEIM 373


>gi|331270390|ref|YP_004396882.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329126940|gb|AEB76885.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + DG  Y L+G K F++ +P++D F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--GQTIAVKDGDKYILNGQKCFITNAPIADVFVIFAMTDKSKGNKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KIL 315
           +   + +    G+   ++++K+G       E+        +L D  V   P E++  K  
Sbjct: 181 ITAFIVEKDFPGISIGKVEDKMGINGAQVGEI--------ILEDCPV---PAENLLGKEG 229

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A            EA  Y + R   G  L     +   +AD+ 
Sbjct: 230 RGFGIAMKTLDGGRIGVAAQGLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMD 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I  +  L ++ A   ++ +  S  AA A++        C   A  V  EA++  GG G
Sbjct: 290 VRIEQSRHLLYKAAMDKNDGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI++  + R +R++    I  G+
Sbjct: 343 YIKDYPVERMFRDAKITQIYEGT 365


>gi|299134720|ref|ZP_07027912.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590530|gb|EFI50733.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 401

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D+ ++ ++ +K+SDG Y L+G K W  ++P++D F++ A+ +    ++  
Sbjct: 143 FGLTEPDAGSDVDSMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVIWAKSQAHDNKIRG 201

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL + +  +GP   +
Sbjct: 202 FILEKGMK-----GLSAPKIAGKLSLRASITGEVVMDGVVVPESALLPNCSGLSGPFGCL 256

Query: 313 KILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               Y +   +M  +        A  Y   R   G  L    +M++ +AD+  +IA    
Sbjct: 257 NRARYGISWGVMGAA--EDCFQRARQYVLDRKQFGRPLAATQLMQKKLADMETEIALGLQ 314

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE K       +A  M  + K   C  A  +   A +  GG+G   E  + 
Sbjct: 315 GSLRVGRLMDEGK-------FAPEMISLMKRNNCGKALDIARVARDMHGGNGISSEFHVM 367

Query: 432 RH 433
           RH
Sbjct: 368 RH 369


>gi|113931598|ref|NP_001039250.1| long-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89273381|emb|CAJ81317.1| acyl-Coenzyme A dehydrogenase, long chain [Xenopus (Silurana)
           tropicalis]
          Length = 444

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 41/281 (14%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 173 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMSDVVIVV 230

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294
           A    E R     +   L D    G    R   KIG ++  T EL F +           
Sbjct: 231 AVTNREARTPAHGISLFLVDNGTKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQ 290

Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               F +L+ +L     P E + I      A M+++       E  +Y ++R   G  + 
Sbjct: 291 ENKGFYYLMAEL-----PQERLLI------ADMALASCEFMFEETRNYVKQRKAFGKTIA 339

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++  +A++   I         L N     A+ R + A      A + KYW   +  
Sbjct: 340 HLQTVQHKLAELKTQICIGRTF---LDNCLQLHAEKRLDSAT-----ASMAKYWASDLQN 391

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +V  + ++  GG GY+ E  IA+ Y +S    I  G+   M
Sbjct: 392 SVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIM 432


>gi|46138579|ref|XP_390980.1| hypothetical protein FG10804.1 [Gibberella zeae PH-1]
          Length = 426

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 21/253 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++      G Y LSG K W  +SP++D  ++ A
Sbjct: 153 MAKGKMLGAFGLTEPNHGSDPGSMETVAKPHPTKKGYYSLSGAKTWITNSPIADVLMVWA 212

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           +++  G++  FLV R  +D  P  L    +K+K G R++ T  ++  N       +  ++
Sbjct: 213 KLQETGKIRGFLVER--KDCPPGTLETPAIKDKNGLRASITGMIQLDNCPVPENNMFPEV 270

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIA 360
               GP   +    Y     M V G +   LA A  Y+  R+   G  L    ++++ +A
Sbjct: 271 EGLRGPFSCLNNARY--GIAMGVMGALEDCLARARTYSLERKQFKGNPLARYQLVQKKLA 328

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D + D A  T  + ++    DE K+  E       M  + K   C  A        E  G
Sbjct: 329 DASTDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDTALRNARLLQEIFG 381

Query: 421 GSGYIEERSIARH 433
           G+   +E  I RH
Sbjct: 382 GNAASDEYMIGRH 394


>gi|329907326|ref|ZP_08274637.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547002|gb|EGF31895.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 376

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ + ++     LTE   G+D +++ +   +  D  Y L+G K F++S   +D  I+LA 
Sbjct: 111 PLAQGTMLGAFCLTEPHAGSDASSLLTTAVRDGDD-YVLNGVKQFITSGKHADVAIVLAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      F VP      S  G    RL++K+G  S+ T  + F N       L+G
Sbjct: 170 TDKAAGKRGISAFWVPT-----SAPGYVVTRLEDKLGQHSSDTAAIAFENCRIPVANLIG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           D      ++   +E  +I I    A  +V   R +   A+ YA+ R   G  + +   ++
Sbjct: 225 DEGQGYRIALSGLEGGRIGI----AAQAVGMARAAFDAALAYAKDRSSFGKTIYEHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D      +EAA A++ A        +MA  V ++A+
Sbjct: 281 FKLADMATQLEAARQLVWHAASLKDAGVPCLKEAAMAKLFA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|167534479|ref|XP_001748915.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772595|gb|EDQ86245.1| predicted protein [Monosiga brevicollis MX1]
          Length = 411

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 21/265 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M +  +    G+TE   G+D+A I +   K  D  Y L+G+K W  ++  ++ F +LA+ 
Sbjct: 143 MTEEPLVASYGVTEPIAGSDVAGIKTTAVKKGDD-YVLNGNKMWITNAGHANWFFVLAKT 201

Query: 250 EGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGD 301
           +            + DG   GL   R +  +G R++ T  + F       +N  G     
Sbjct: 202 DPNAKASKAFTGFIVDGDSAGLTRGRKEINMGQRASDTRGVTFEDVVVPAANRLGAEGDG 261

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++ G  +  +  +    A  +V   + +L EA  YA+ R   G  + D   +   +AD
Sbjct: 262 FKIAMGAFDRTRPPV----AAGAVGLAQRALDEATAYAKDRKAFGRPIADNQAVAFMLAD 317

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ +  A  ++ R A   D+ +  +         A I K +   +A     +A++  GG
Sbjct: 318 MAIGVETARLITRRAAWEVDQGRRNT-------YYASIAKAFAADVANKNATDAVQVFGG 370

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY  +  + +  R++    I  G+
Sbjct: 371 NGYNSDYPVEKLMRDAKIYQIYEGT 395


>gi|160901422|ref|YP_001567004.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160367006|gb|ABX38619.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 395

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G + L+G K W  + P +D  ++ A+ E  +    V
Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYFLLNGTKMWITNGPDADTLVVYAKTEPELNARGV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F N     +   NV  G     K+L+  
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENV---EVPAENVLGGLNNGAKVLMSG 246

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     ++G     M+  +   + Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 247 LDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSF 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++ +A + D   +  E     R        WC + A  +  E ++  GG+GYI E  + R
Sbjct: 307 AYTVAKNLDLLGT--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGR 364

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 365 LWRDAKLYEIGAGT 378


>gi|320166428|gb|EFW43327.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++ +K  D  Y L+G K W  ++  +  F+++A  +   G     C
Sbjct: 162 LSEAGSGSDAFALQTKAEKKGDD-YILNGTKMWITNAAEAGVFLVMANADFSKGYKGITC 220

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+V R     +P GL   + ++K+G R+++T  +  ++       +LG         +  
Sbjct: 221 FIVDR----DTP-GLEIGKKEDKLGIRASSTCSVNLTDVRVPASNILGKFG------QGY 269

Query: 313 KILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366
           K  I  L+   + +    + LA+ +      Y  +R   G I+ +   M+  IA +A +I
Sbjct: 270 KYAISMLNEGRIGIGAQMLGLAQGVFDVTMPYLHQRKQFGTIIAEFQGMQHQIAQVATEI 329

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A   +  +  ++EAA A++       +  ++A    ++ +E +GG G+ +
Sbjct: 330 TAARLLVYNAARLQEAGRPVAQEAAMAKL-------YASQVAETSASKCIEWLGGVGFTK 382

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +    ++YR+     I  G+ N
Sbjct: 383 DFPAEKYYRDVKIGKIYEGTSN 404


>gi|320538446|ref|ZP_08038313.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421]
 gi|320144708|gb|EFW36457.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 28/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255
            GLTE   GTD A    Q   + D     + L+G K F+++   ++ +I+ A  +   G 
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDEATNEWVLNGSKIFITNAGYANVYIIFAMTDKSKGV 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +   + + +  G    + + K+G + +AT EL F N       LLGD+N      +  
Sbjct: 181 KGISAFIVESTTPGFSVGKKEKKLGIKGSATCELIFENARIPKDNLLGDVN------KGF 234

Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI ++ LD   + ++   + LA     E + Y + R   G  +      +  +A++ + +
Sbjct: 235 KIAMMTLDGGRIGIASQALGLAQGALDETVKYVKERKQFGRPISAFQNTQFQLANLEVKV 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L ++ A +       S +AA A++ A        + A  V  +A++  GG GY  
Sbjct: 295 EAARLLVYKAAWAESNGLPYSVDAARAKLFA-------AETAMEVTTKAVQFFGGYGYTR 347

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 348 EYPVERMMRDAKITEIYEGT 367


>gi|229542455|ref|ZP_04431515.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326875|gb|EEN92550.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 378

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 24/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D   + ++  K     Y L+G K F+++   +D +I+ A+ E G +  F+V 
Sbjct: 124 LTEAEAGSDAKNLKTRAVKQGRH-YVLNGSKMFITNGGEADTYIVFARTEDGNITAFIVE 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318
           + +      G    + + K+G   + TV+L F N     +   N      E  KI +  L
Sbjct: 183 KTMP-----GFRVGKDEKKMGLHGSKTVQLHFEN---LQVPAENRLGEEGEGFKIAMAVL 234

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D+  + ++   + +AE     A+ YA+ R   G  +         +AD+A +I A+  L 
Sbjct: 235 DAGRIGIAAQALGIAEGAYERALQYAKNRRQFGKPIHAFEGTGFKLADMATNIEASKLLL 294

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A          +EAA A+++A  T       A     EA++  GG GY E+  + R 
Sbjct: 295 YRAAFLRSNGLDCKKEAAMAKLLASQT-------AVDTAIEAVQIFGGYGYTEDYPVERF 347

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
            R++    I  G+     + + N L
Sbjct: 348 MRDAKITQIYEGTSEIQRIVISNQL 372


>gi|308475085|ref|XP_003099762.1| hypothetical protein CRE_23613 [Caenorhabditis remanei]
 gi|308266417|gb|EFP10370.1| hypothetical protein CRE_23613 [Caenorhabditis remanei]
          Length = 572

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 39/284 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           ++E   G+D  A+ +  +K  D  + +SG K W   S  +  F++ A  +       + C
Sbjct: 207 ISESGAGSDAFALKTVAKKDGDD-FLISGSKMWITDSGEAQVFVVFANADPSQKYKGITC 265

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R +E     GL   R ++K+G R+++T ++ F N       +LG+     G     
Sbjct: 266 FIVERGVE-----GLTVDREEDKLGIRASSTCQVHFDNVRVHKSAILGEY----GKAYKY 316

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID---QPV----MKRAIA 360
            I   L++  + +    + LA+      I Y ++R   G  LID    P     ++  IA
Sbjct: 317 AIEC-LNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGKRLIDFQSSPNRIQGLQHQIA 375

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  +I AA  L +  A   +       EAA A++ A        ++A +  A+ ++ +G
Sbjct: 376 QVRTEIEAARLLVYNAARMKEYGIPYVREAAMAKLFA-------SQVATSTSAQCVKWLG 428

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           G G+ +E    + YR++    I  G+ N  +  +  L++    L
Sbjct: 429 GVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNEYKL 472


>gi|302344609|ref|YP_003809138.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641222|gb|ADK86544.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 413

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVE--------GR 252
           LTE RGG+D    ++      D  Y +SG K F+     +D F++ A+ +          
Sbjct: 127 LTEPRGGSDFFGTSTVAVDQGDH-YLVSGQKRFIVGGEGADYFLVYARTDHDPKAHPHKA 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309
           + C +V R      P G+  + L   +G R      L F +       ++G +N +    
Sbjct: 186 LTCLIVDR-----GP-GVKVEYLYGLMGCRGGGAARLVFKDAVAPKSNVVGQINNAYAVF 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M +   L +A M++   R +L  A  Y  RR   G ++     +   +A+ A+ + A 
Sbjct: 240 NTMMVPERLGTAAMTIGAARPALEVATGYTTRRKAFGQVIAQFQGVSFQVAEAAMLLDAC 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+++  A++ D    +       R +   TK +  +    V   AM+ +GG GY     
Sbjct: 300 RAIAYTTASAVD----KGVRPDVVRRLVSQTKKFITESCQKVAHNAMQVMGGIGYTNVFP 355

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           + R +R+    SI  GS   M +
Sbjct: 356 VERIFRDLRLASIWTGSNEVMSM 378


>gi|28210225|ref|NP_781169.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28202661|gb|AAO35106.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTD-----IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           P   T   IG   LTE   G+D     + AI      I +G+ C S      ++P++D F
Sbjct: 112 PDLSTGRKIGAFNLTEPEAGSDAANGSVTAIKEGNHYIINGLKCFS-----TNAPVADTF 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           ++    +   G   +   + +    G+   +++NK G  +    ++ + N       L+G
Sbjct: 167 VVFVITDKSKGPKGISAFIVEKDFPGISIGKVENKCGINAAQVSDVIYDNCKVPAENLIG 226

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR--- 357
           +     G       L  LD   + V+   + +AE      + ++   +   +P+ K    
Sbjct: 227 EEGKGLGIG-----LSTLDGGRIGVAAQGLGIAEGAFEIAKNYMKERVQFGKPIYKNQYL 281

Query: 358 --AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A++A++I  A  L ++ A   DE K  S  AA A++        C  +A  V  EA
Sbjct: 282 GFKMAELAVEIEKARYLLYKAALDKDEGKPYSVSAAMAKL-------ACTDLAMKVTVEA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG+GY+++ ++ R  R++    I  G+
Sbjct: 335 VQMLGGNGYMKDYNVERMMRDAKITQIYEGT 365


>gi|297263698|ref|XP_002798848.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 21/200 (10%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP         GL   + ++K+G R ++T  L F +     +   ++   P    
Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+     A +YA  R   G  L    V++  +AD+AL +
Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMALAL 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY+ 
Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 371 EMPAERHYRDARITEIYEGT 390


>gi|294012056|ref|YP_003545516.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675386|dbj|BAI96904.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 380

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 167/397 (42%), Gaps = 35/397 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +G++ L+     +  MA   T    A  P    WD+    P     +R +   G   SI+
Sbjct: 1   MGQFDLTEDQLAIQEMARRFTAD--AITPFAAEWDEKHIFP--RETIRAAAELGFG-SIY 55

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                  V ++A  I   RL     +EA     PS ++   +  M    + + +  +   
Sbjct: 56  -------VSEEAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDR-FGSQAVK 107

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            +Y P+   PM++        LTE   G+D AA+ ++  +  D  Y ++G K F+S    
Sbjct: 108 DKYLPS-MVPMERIGSYC---LTEAGSGSDAAALKTRAVRQGDH-YVVTGSKQFISGGGE 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +   ++    G  G   +  L+ +    G+ +   + K+G  S  T ++ F    G  + 
Sbjct: 163 NEIYVVMVRTGDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFD---GVRVP 219

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             N+  G  E  +I ++ LD   +     S+ G +  + EA+ Y + R   G  + D   
Sbjct: 220 VENLVGGEGEGFRIAMMGLDGGRLNIGACSLGGAQRCIDEALSYTKDRKQFGQSIADFQN 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +  +AD+  ++ AA  L +  A    E A  ++  AA A+ +A  T         +V+ 
Sbjct: 280 TQFMLADMETELQAARTLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVD 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A++  GG GY+ +  + R +R+   +SIL G+   M
Sbjct: 333 RALQLHGGYGYLMDYPVERFWRDLRVHSILEGTNQVM 369


>gi|229491757|ref|ZP_04385578.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229321438|gb|EEN87238.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQV----EG 251
           + + +TE   G+D+AAI +  +   DG  Y L+G K F++ +  +   +++A+     E 
Sbjct: 122 LAVAMTEPGTGSDLAAIRTTAKLSDDGESYILNGAKTFITNASQATHMVVVARTGDPGEN 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R G   +   + D    G    R  +KIG + + T E+ F+N       +LG+   +   
Sbjct: 182 RRGGLSL--FVVDTESAGFEVGRRLDKIGLKFSDTCEVSFTNVRVPVTDVLGEEGAAFSY 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A    +    ++A A+ Y   R V G  + D    K  +A+ A D+AA
Sbjct: 240 LGQNLPRERLAMAAGGCATAAAAIAHAVSYTSDRRVFGKPVADFQNTKFVLAECATDLAA 299

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +        D A +  +    + + A I K +C +MA  VI + ++  GG GYI E 
Sbjct: 300 GQTM-------VDHAVALEDAGELSAVDAAICKLFCTEMAGRVIDKCLQLHGGYGYILEY 352

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR Y ++  + I  G+   M
Sbjct: 353 PIARLYADTRVSRIYGGTSEVM 374


>gi|196248254|ref|ZP_03146955.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196211979|gb|EDY06737.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 392

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 55/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
             +TE   G+D   I     K  D  + L+G K F++      F+M+  +          
Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQATN 184

Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           GR G  CF+V R           +   +P  L ++ ++       N   EL +    G+ 
Sbjct: 185 GREGVTCFIVDRDMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHY----GYK 237

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           LG              L ++  A   V    V  AE     AI YA+ R   G  + ++ 
Sbjct: 238 LG--------------LEWIGYARWVVGARAVGTAERLLQMAIDYAKERVTFGKPIAERQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD A++I AA  L    A + DE +         R +A + K +   M   V+ 
Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------RHLASMAKLFGANMGNRVVD 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             M+  GG GY +E  I R YRE+    I  G+     L +   L KG
Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384


>gi|327309784|ref|YP_004336682.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326955119|gb|AEA28815.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 387

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 37/270 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252
           G+ LTE   GTD+  IT+  ++  D  Y ++G K W  ++  +D   +L + +       
Sbjct: 121 GIALTEPGAGTDLQGITTVAKRDGDD-YVVNGTKMWITNARHADPLPVLVKTDPAATPAH 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308
            G  +   LL +    G        K+G +   + E+        +L D+ V      G 
Sbjct: 180 RGMSI---LLVEADSAGFEVTADIGKLGYKGTESCEV--------VLADVRVPASQLLGG 228

Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
           VE     + L  L++  ++++   V +A     EA+ YAR R   GG + +   ++  +A
Sbjct: 229 VEGRGLQQALSALETGRINIAARSVGVAQRAYDEALSYARERTAFGGPIGEFQAIQLRLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+ + +A  +++  A+  DE      E+  A+I A      C         +AM   G
Sbjct: 289 EMAVALQSARLMTYWAASRMDEGVRMDTESGMAKIAASEAALSCAM-------DAMRIHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY  E  + R YR++P  SI  G+ + +
Sbjct: 342 GYGYSTEFEVERLYRDAPLMSIGEGTNDVL 371


>gi|319650452|ref|ZP_08004593.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397863|gb|EFV78560.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 594

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 34/292 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D F++ A+++G     F+V
Sbjct: 150 LTEPSSGSDALGAKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G +S++T  L   +       LLG+     G V    IL
Sbjct: 210 EREFP-----GVSVGAEEKKMGIKSSSTRTLILEDAQVPKENLLGEF--GKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   + +V G + +   A+ YA++R      +    + K  +  +A  I AA +  
Sbjct: 263 NIGRYKLGVGAVGGAKRAFELAVQYAKQRQQFKTPISQFNLTKEKLGTMASKIYAAESAV 322

Query: 374 FRLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R    F++  S+ S+E            A YA I   + K++  ++   V+ E ++  G
Sbjct: 323 YRTVGLFEDRMSKLSDEEVKDGKEVAKSIAEYA-IECSMNKFFNTEVLDYVVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           G G++ E  I R YR+S  N I  G+      ++  LL  GT L + L   L
Sbjct: 382 GYGFMAEYEIERAYRDSRINRIFEGTN-----EINRLLVPGTYLRKALKGEL 428


>gi|315925740|ref|ZP_07921948.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620983|gb|EFV00956.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 396

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 43/265 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D +A  +   +  D  Y L+G K F+SS  ++D F + A  +   G     C
Sbjct: 137 LTEADAGSDASATRTTAVRDGDD-YILNGSKCFISSGGIADMFTVFAVTDKEKGAHGISC 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLG--D 301
           FLV +  E     G+   + +NK+G R + T  L F +              GF++    
Sbjct: 196 FLVEKERE-----GVGVGKEENKMGLRLSNTTSLSFDDVRVPAKNLIGEEGQGFMIAMQS 250

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L+ S G V     L   + AI           EA  YA  R   G  +I    +   +AD
Sbjct: 251 LDRSRG-VNSYGCLGIAERAI----------DEATKYAMVRRTFGKPIIKNQGISFMLAD 299

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA  L +  A+  D+         Y   +  +TK +   +A  V  +A++ +GG
Sbjct: 300 MEIQTTAARTLLYHCADMIDKT------GQYDTRLGSVTKTFVSDVAMKVTTDAVQILGG 353

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY +E  + +  R++    I  G+
Sbjct: 354 YGYSKEYPVEKLMRDAKIFQIFEGT 378


>gi|227819568|ref|YP_002823539.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227338567|gb|ACP22786.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 395

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D A + ++  K  DG   +    W  ++P++D F++ A+ E   G  +  
Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEDGYRLIGSKMWISNAPLADVFVVWAKSEAH-GNAIRG 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316
            +LE G   GL   ++  K+  R++ T E+   N   G   LL D+    GP        
Sbjct: 196 FVLEKGM-KGLSAPKIAGKLSLRASITGEIVLDNVEVGEEALLPDVEGLKGP------FG 248

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA    
Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE +   E       M  + K   C  A  +   A +  GG+G  EE  + 
Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISLVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361

Query: 432 RH 433
           RH
Sbjct: 362 RH 363


>gi|194291863|ref|YP_002007770.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225767|emb|CAQ71713.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 367

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++  + +D  + L+G K F+++   +   ++ A  E   G+ G   
Sbjct: 115 LTEPQAGSEAHNLRTRA-RFTDNGWVLNGSKQFVTNGQRAGVAVVFAATEPERGKKGISA 173

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP     G+P G      + K+G R++ T  +   +       LLG+    L ++   
Sbjct: 174 FLVP----TGTP-GFIVHAPEKKLGIRASDTCAITLEDCVVPHDALLGEPGEGLRIALSN 228

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ A
Sbjct: 229 LEGGRIGI----AAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNA 284

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  R A    +      EA+ A++ A        ++A  V ++A++  GG GY+E+ 
Sbjct: 285 ARLLVHRAARMRSDGVPCLSEASQAKLYAS-------ELAERVCSKALQIHGGYGYLEDY 337

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 338 PVERHYRDARITQIYEGT 355


>gi|153001362|ref|YP_001367043.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151365980|gb|ABS08980.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 389

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  + L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|221067808|ref|ZP_03543913.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712831|gb|EED68199.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 392

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253
           +G++E   G+D++ I S  +K  D  Y +SG K W  +S  +D   ML    EG V    
Sbjct: 123 IGVSEPGAGSDVSGIRSHARKDGDD-YVISGQKMWITNSIQADWMCMLVNTSEGPVHKNK 181

Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              +VP  L +G    L       Q+L+ KIG  S+ T  L F        +L+G     
Sbjct: 182 SLIMVP--LREGPRGKLTKGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236

Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G +  M+     +    S SG   M   + + I +A++R + G  LIDQ  ++  +A++
Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL++R A  +   +   + A+ A++ +        ++   V    ++  GG 
Sbjct: 296 QTEVEALRALTYRAAQIYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G+  +  ++R YR+    SI  G+   M+
Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377


>gi|94314071|ref|YP_587280.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357923|gb|ABF12011.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 39/296 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             +   + ++E   G+D+ ++ ++  K  D  Y
Sbjct: 105 TEEQKRKWLPKMATGE-------------LVAAIAMSEPGAGSDLKSVKTRALKEGDS-Y 150

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F+++   ++  +++ + +   G   V   ++E     G    R+  K+G +  
Sbjct: 151 VINGSKTFITNGYHANLILVICKTDPEAGARGVSIVVVETDGQQGFRRGRILEKMGQKGQ 210

Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334
            T EL F +        L    G          P E M I      A+ +++ M  +L  
Sbjct: 211 DTAELFFDDMRVPCANLLGTEEGKGFYQLMQQLPQERMII------ALGALASMERALGL 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y R R V G  LI+    +  +A+   +  A  A SF   N   E   R E      
Sbjct: 265 TIEYVRNRKVFGESLIELQNTRFRLAECKTN--ATIARSF--VNDCMEKILRGELDPGTA 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            MA   K+WC + +  +I E ++  GG GY+ E  IAR Y  +  + I  GS   M
Sbjct: 321 AMA---KWWCTQRSCEIIDECLQLHGGYGYMMEYPIARMYVNARVSKIYGGSNEIM 373


>gi|126740367|ref|ZP_01756055.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126718503|gb|EBA15217.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 32/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              + +    G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFIVEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLGEEGRGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       + E + Y + R   G  + +  +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYLKERKQFGQPIGNFQLMQAKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426
           A  + +A + D+     ++AA            CC  A  V      +A++  GG+GY+ 
Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  + R +R+  A  + +G+G + +  +L
Sbjct: 351 DNPVGRIFRD--AKLMEIGAGTSEIRRML 377


>gi|169622111|ref|XP_001804465.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15]
 gi|111057387|gb|EAT78507.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15]
          Length = 436

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 37/304 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           + ++ K+W PK+               T+      L+E   G+D  A+ ++  K  +G Y
Sbjct: 156 SEKLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATKTDNG-Y 200

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            +SG K W  +S  ++ FI+ A ++  +    +   ++E G+P G    + + K+G +++
Sbjct: 201 KISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKGTP-GFSIAKKEKKLGIKAS 259

Query: 285 AT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           +T       VE+   N  G        + G + + +I I   +A M+   +      A +
Sbjct: 260 STCVINFDDVEIPKDNLLGKEFEGYKYAIGLLNEGRIGI---AAQMTGLALGAWENAAGY 316

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM- 396
               R   G ++ +   M+  +A    +I AA AL +  A        R +EA    +M 
Sbjct: 317 VWNDRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAA--------RKKEAGEDFVMD 368

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +  ++A  V   A+E +GG G++ E    +++R+S   +I  G+ N  +  +  
Sbjct: 369 AAMAKLYSSQVAGRVSGSAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIGK 428

Query: 457 LLEK 460
            L+K
Sbjct: 429 HLQK 432


>gi|300773424|ref|ZP_07083293.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759595|gb|EFK56422.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 383

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 25/293 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F+ E       P   T+  IG  GLTE   G+D   +T+  ++  D  + L+G K F++ 
Sbjct: 101 FANEEQKKKYLPKLATAEWIGAWGLTETGSGSDAGGLTTVAERDGD-YFILNGSKNFITH 159

Query: 238 PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
            +S    ++    G+ G        ++E G+P G    + +NK+G R++ T  L F N  
Sbjct: 160 AISSEVAVVITRTGQKGDKKGKTAFIIEKGTP-GFSAGKKENKLGMRASETACLFFDNCR 218

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                ++G+     G V+ +K+   LD   +S++ + + +A      A+ YA  R     
Sbjct: 219 VHKDQIVGE--EGQGFVQALKL---LDGGRISIAALSLGIARGAYECALKYANEREQFNQ 273

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D   +   +A++A  + AA  L+ R A    E+ ++S +      ++ + K +  + 
Sbjct: 274 KIFDFQAVGFKLAEMATQVEAAELLT-RQAAFLKESGTKSSK------ISAMAKLYASEA 326

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  V  E+++  GG G+ ++    +++R++   +I  G+ +   + +   ++K
Sbjct: 327 AVEVSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTSSIQKMVIAREIQK 379


>gi|121608860|ref|YP_996667.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553500|gb|ABM57649.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 394

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 29/269 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-- 255
           +G++E   G+D+A I S  +K  DG  Y +SG K W  +S  +D   ML   +   G   
Sbjct: 123 IGVSEPDAGSDVAGIRSVARK--DGADYLISGQKMWITNSLQADWMCMLVNTDSGSGSAH 180

Query: 256 -----FLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 +VP     G   +P     Q+++ KIG  S+ T  L F        + +G    
Sbjct: 181 KNKSLVIVPLRAGPGGKLTPGVQIAQKIR-KIGMHSSDTGLLHFDEVRVPQRYRIG--AE 237

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G V  M+      L  A  ++  +   +   I +AR+R + GG L DQ  ++  +A++
Sbjct: 238 GQGFVYQMQQFQQERLWCAASTLETLTHCIDWTIEWARQRQLFGGALADQQWVQFKLAEL 297

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL++R  + +   +   E A+ A++ A        ++   V    ++  GG 
Sbjct: 298 KTEVEALRALTYRACDLYVAGQDVLELASMAKLKAG-------RLNRTVPDTCLQFWGGM 350

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY  E  +AR YR+    SI  G+   M+
Sbjct: 351 GYTLENKVARMYRDGRLASIGGGADEVML 379


>gi|145223033|ref|YP_001133711.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443489|ref|YP_004076368.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215519|gb|ABP44923.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315261792|gb|ADT98533.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 22/263 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251
           + +TE   G+D+A + +   +     D  Y ++G K F++  M +D  I++A+       
Sbjct: 124 IAMTEPGTGSDLAGMRTTAVRDGSGPDADYIVNGAKTFITGGMQADLVIVVARTSTDPDN 183

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            R G  L+  ++EDG   G    R   K+G +   T EL F +       +LG+++ + G
Sbjct: 184 RRKGLTLL--VVEDGM-EGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEAFG 240

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +        L  A+ SV+  R ++A AI Y R R   G  +      K  +A  + ++ 
Sbjct: 241 YLGHNLAQERLTVAVGSVAQARSAIAAAIDYTRNRKAFGTPVASFQNTKFELAACSTEVE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A+        D A S   E   +   A  TK +C +M   V+   ++  GG GY+ E
Sbjct: 301 AAQAM-------LDRAVSLHVEGELSGADAARTKLFCTEMQQRVVDRCLQLFGGYGYMME 353

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             IAR Y ++    I  G+   M
Sbjct: 354 YPIARLYTDARVARIYAGTSEVM 376


>gi|331699922|ref|YP_004336161.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326954611|gb|AEA28308.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 387

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 37/270 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252
           G+ LTE   GTD+  IT+  ++  D  Y ++G K W  ++  +D   +L + +       
Sbjct: 121 GIALTEPGAGTDLQGITTVAKRDGDD-YVVNGTKMWITNARYADPLPVLVKTDPAAAPAH 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308
            G  +   LL +    G        K+G +   + E+        +L D+ V      G 
Sbjct: 180 RGMSI---LLVEADSAGFEVTADIGKLGYKGTESCEV--------VLTDVRVPASQLLGG 228

Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
           VE     + L  L++  ++++   V +A     EA+ YAR R   GG + +   ++  +A
Sbjct: 229 VEGRGLQQALSALETGRINIAARSVGVAQRAYDEALRYARERTAFGGPIGEFQAIQLRLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+ + +A  +++  A+  DE      E+  A+I A      C         +AM   G
Sbjct: 289 EMAVALQSARLMTYWAASRMDEGVRMDTESGMAKIAASEAALSCAM-------DAMRIHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY  E  + R YR++P  SI  G+ + +
Sbjct: 342 GYGYSTEFEVERLYRDAPLMSIGEGTNDVL 371


>gi|323694452|ref|ZP_08108623.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323501533|gb|EGB17424.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 22/281 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K        LTE   G+D A   +  +K  D  Y ++G K F+++ P+ D  ++ A 
Sbjct: 111 PVMKGEKEGTFALTEPSAGSDAATQNTIARKDGD-YYIINGRKAFITAAPLCDFAVVFAA 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +  +G   +   + +    G    + + K+G   + T ++   N       +LG+    
Sbjct: 170 TDVLLGARGITAFIIERDTPGYSVGQPERKMGVNGSPTADIILENVKVHKSQILGE---- 225

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
            G    M +   LDS  + V+   + +AEA     + Y R+R   G  L +   ++  +A
Sbjct: 226 EGKAFQMAMKT-LDSGRLVVAAQCLGIAEAAMKEAVGYVRQRRQFGAALSEFQGIQFMLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A AL +  A   D   + ++EAA A       KY+  +M   + A+A++  G
Sbjct: 285 DMETKLCCARALIYDAAEKKDAGMNITKEAAAA-------KYFASEMCNEIAAKALQLHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             GY+++  I R +R++   +I  G+   +   +   + KG
Sbjct: 338 AYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQVLKG 378


>gi|224540611|ref|ZP_03681150.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517769|gb|EEF86874.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 568

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +      +  + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G   + T EL + N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKREGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L++A +     YA+ R      +I+ P +   +A +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFSKAIIEFPAVYDMLAIMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           AL ++ +   D  K+              R E+  Y+++     P+ K    + A     
Sbjct: 347 ALLYQTSRYVDIYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + ++  GGSG++ E +  R YR++   SI  G+     +  +  +  G+
Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455


>gi|145476811|ref|XP_001424428.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391492|emb|CAK57030.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  +K+ D  Y L+G K W  + P++D  ++ A+ E       +
Sbjct: 141 LAMSEPNAGSDVVSMKTTAKKVGDK-YILNGSKMWITNGPVADVIVVYAKTEPEKKQHGI 199

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +KIG + + T  + F N       +LG++N   G    M  L
Sbjct: 200 TAFIVEAGMKGFSRGKKLDKIGMKCSDTAPIYFDNVEVPAENVLGEVN--KGVYVLMSGL 257

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  L  A   V  M+ +   +  Y   R   G  +    +M+  +A++   + A+ A+ 
Sbjct: 258 DYERLVLAAGPVGLMQAAFDISREYCNTRQQFGKPIGQFQLMQGKLAEMYTTLQASRAML 317

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + ++ + D     + + A A I      Y+    A  V  EA++C+GG+GY +E  + R
Sbjct: 318 YSVSRAVDSGNITNTDCA-ALI------YYTSVNATQVGLEAIQCLGGNGYTQEYPVGR 369


>gi|110635609|ref|YP_675817.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110286593|gb|ABG64652.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 395

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 36/328 (10%)

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +VR++  ++ A+  +L     AG +M         + L +T  + + + P++ + ++   
Sbjct: 84  LVREEISRVSASAAWLAGNNTAGGVMP--------LLLGSTEEMRRRYLPELATGKH--- 132

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIM 245
                  T +A    ++E   G+D++AI +   +  D  Y ++G K F+SS P++    +
Sbjct: 133 ------LTCIA----MSESDAGSDVSAIRTTAVRDGDH-YVVNGTKTFISSGPVASFGTV 181

Query: 246 LAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           LA+  G V  G   +     D S  G+   +   K+G R   T E+ F +       +LG
Sbjct: 182 LAKT-GPVSAGKDAISSFFFDASWKGISVGKKDRKLGMRGTPTGEIRFEDVRIPASHILG 240

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRA 358
                 G    MK+L      + +   G+    A+ A+ Y + R   G  + D    + A
Sbjct: 241 G-GEGRGFALAMKVLNRNRPTVGAFGCGIARGAADYALAYTKERRAFGRAVYDFQATRFA 299

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            AD+ + I AA +L +R A   D       +A     ++ + K +  +M   V   AME 
Sbjct: 300 FADMYMQIEAARSLLYRTAYRLDS----DPDAPETECLSAMAKCFASEMCMRVAISAMEQ 355

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
           +GG GY+ +  + R  R++ A   L G+
Sbjct: 356 LGGHGYMVDHPLERMMRDAKALHFLEGT 383


>gi|28212011|ref|NP_782955.1| butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204454|gb|AAO36892.1| butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K       GLTE   GTD A   S    + D  Y L+G K F+++  ++D  ++ A 
Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDAAGQQSIAIDMGDH-YLLNGSKIFITNGGVADVAVVFAM 171

Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +   G   +   +LE G P G    ++++K+G R+++T EL F         D+ V   
Sbjct: 172 TDRSKGTRGISAFILEKGMP-GFSVGKVEDKMGIRASSTTELIFE--------DVKV--- 219

Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353
           P E++  K       A+ ++ G R+ +A            EAI Y + R   G  L    
Sbjct: 220 PKENLIGKEGRGFGIAMKTLDGGRIGIASQALGIAEGALEEAITYMKERKQFGRELYKFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+ + I +A  L ++ A         SEEAA A++ A         +A  V  
Sbjct: 280 GLSWMMADMKVAIESARLLVYQAAWKKQNKLPYSEEAAMAKLHA-------ANVAMDVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + ++  GG GY ++  + R  R++    I  G+
Sbjct: 333 KVVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365


>gi|117928400|ref|YP_872951.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648863|gb|ABK52965.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 378

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 23/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGT--DIAAITSQGQKISDG-IYCLSGHKWFLSSPMS-DAFIM 245
           P     + +   LTE   GT  DI +       + DG  Y L+G K  ++  +  D +++
Sbjct: 110 PQVAGDIRVAFTLTEPTAGTGADIRSTV-----VRDGDTYYLTGEKHLITFGVRCDYWLL 164

Query: 246 LAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            A+V G  G    V  +++  SPN +  + +   +G R      L F  T   +   L  
Sbjct: 165 FARVAGTTGKDGTVALMVDRHSPN-VVVKEMSPSMGVRGTDHAHLIFRETPVPVANRLG- 222

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
           + G   D+    +L  + +SV+   V LA      A+ YA++R   G  L D+ V+  A+
Sbjct: 223 AEGEGLDVAFGGFLTPSRISVAMTCVGLARRAQELAVEYAKQRVTFGKRLADRQVIAYAL 282

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+ A DI AA  L+   A  ++        AA A  ++ + K     M   V  +A++  
Sbjct: 283 AENATDIEAARQLTLYAARQWESG------AADALTLSSMAKLNAVDMLTRVTDKALQIH 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY +   I R YR++ A     G+
Sbjct: 337 GGIGYFQSSPIERVYRDARAQRFEEGT 363


>gi|197104750|ref|YP_002130127.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478170|gb|ACG77698.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 388

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  ++P +D  ++ A+ +       +
Sbjct: 131 LAMSEAGSGSDVVSMRLRAEKKGD-RYVLNGTKFWITNAPHADTLVVYAKTDPDADSRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       ++G LN   G +  M  L
Sbjct: 190 TAFLIEKDFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPLNGGVGVL--MSGL 247

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++      M+  +   + Y R R   G  +    +M+  IAD+ + + +A A 
Sbjct: 248 DY-ERAVLAAGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADMYVALNSARAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D   +   +AA A +MA        + A  V  EA++ +GG+GY +E  + R
Sbjct: 307 VYAVAKACDAGMTTRFDAAGAILMA-------SENAVKVALEAIQALGGAGYTKEYPVER 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 MLRDAKLYDIGAGT 373


>gi|302381945|ref|YP_003817768.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192573|gb|ADL00145.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 387

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 20/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           + +TE   G+D+  + +   K  +G Y ++G K F+++  +++  I++A+ +   G  G 
Sbjct: 131 IAMTEPGAGSDLQGVKTTAVKSGNG-YVINGSKTFITNGQLANFIIVVAKTDPAAGAKGT 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            L+  ++E     G    R  +KIG   N T EL F++       ++G      G ++ M
Sbjct: 190 SLI--VVETDGAEGFERGRNLHKIGMEGNDTSELFFNDVHVPADNIIGG-EEGRGFIQLM 246

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L    L+ A+  ++     L E + Y ++R   G  +++    +  +A++   +  A 
Sbjct: 247 QQLPQERLNIAVQGIAAAERGLQETLAYVKQRKAFGKSVLEFQNTQFKLAEVKTKLTVAR 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                     D       +     + A + KYW   +   VI E ++  GG GY+ E  I
Sbjct: 307 VF-------VDHCIGLHLKGQLDAVTASMAKYWVTDLQGEVIDEMLQLHGGYGYMNEYPI 359

Query: 431 ARHYRESPANSILLGSGNAM 450
           A+ Y+++    I  G+   M
Sbjct: 360 AQLYKDARVQRIYGGTNEIM 379


>gi|226305242|ref|YP_002765200.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184357|dbj|BAH32461.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 382

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 14/242 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGD-HYVVNGAKTFITSGVRADFVVTAVRTGGPGAGGVS 182

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G+P G    R   K+G R++ T EL F +       L+G  N     +    + 
Sbjct: 183 LLVIEKGTP-GFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + +     L   + + R R   G  LI +  ++  + ++A  I  A   +  
Sbjct: 242 ERVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHS 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +   +         E  +A+  A  T  W       V  +A++  GG GY++E  + R Y
Sbjct: 302 VIERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|310826162|ref|YP_003958519.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612]
 gi|308737896|gb|ADO35556.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612]
          Length = 379

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A   Q + + +G  Y L+G K F+++   +D +I+ A  +   G   
Sbjct: 123 FGLTEPGAGTD--ASGQQTKAVLEGDHYVLNGTKIFITNGGKADVYIIFAMTDKSKGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G      + K+G R ++T EL F +       LLG      G       
Sbjct: 181 ISAFIVEKDYPGFSIGTKEKKMGIRGSSTTELIFEDCIVPKENLLGKEGKGFGIA----- 235

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + LA     E + Y + R   G  +      +  +AD+   I AA
Sbjct: 236 MQTLDGGRIGIAAQALGLAQGAFDETVAYVKERKQFGRSIAKFQNTQFKLADMYARIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A + D  K  S EAA A++ A  T       A AV  E ++ +GG GY  +  
Sbjct: 296 RNLVYKAAIAKDTQKVFSVEAATAKLFAAET-------AMAVTTECVQLLGGYGYTRDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|229582640|ref|YP_002841039.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|228013356|gb|ACP49117.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
          Length = 391

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 15/275 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K      + +TE  GG+ I  I ++ +K  D  Y +SG K F+++ P++D F++ A 
Sbjct: 126 PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGDQ-YIISGKKVFITNAPIADIFLVFAN 184

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
               +  F++P  +E     GL   +  +K+G R     E+   N    +   LG+    
Sbjct: 185 TSNGITAFIIPSNVE-----GLKIGKPIHKLGLRGAVFSEVSLDNVIVSIENRLGEEGEG 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 + I   + +A +++      L +   Y   R +    LID  ++K  IA+    
Sbjct: 240 INIARHIFIGGRIIAAAIALGIGDAVLDQVYQYVISRELGNHKLIDFQILKEKIANFETI 299

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +      ++ +A   D+   +         +A I+K +  +    +  EA+   GG GY 
Sbjct: 300 LHMGKIYTYYVAYLMDKMPRQELNE-----LASISKLFTTEGVLNIANEAISIFGGYGYT 354

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +I  ++R+    +I  G+ +   L + + L+K
Sbjct: 355 DNLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389


>gi|89897467|ref|YP_520954.1| hypothetical protein DSY4721 [Desulfitobacterium hafniense Y51]
 gi|89336915|dbj|BAE86510.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 604

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 43/298 (14%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG-R 252
           + LTE   GTD+ A IT        GIY + G+K F+++    + + FI  +LA+ EG R
Sbjct: 158 MNLTEPGAGTDVGANITKAFATDEPGIYKIKGNKLFITAGDHDLCENFIHLVLARTEGAR 217

Query: 253 VGC-----FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLL 299
            G      F+VP+    +DGS    N +    ++ K+G   + T  L +    N  G+++
Sbjct: 218 PGTAGLSLFVVPKYWVNDDGSLGEFNDVITTGIEEKMGQHGSPTCSLTYGENDNCRGYII 277

Query: 300 GDLNVSTGP---VEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           GD    +G    +  M +++    L++ I  ++    +   A  YA+ R V G    D  
Sbjct: 278 GDPPDESGKGQGIAQMFVMMNEERLNTGIQGLAAASQAFNLAREYAKIR-VQGTKFTDPK 336

Query: 354 VMKRAIAD-------IALD---IAAATALSFR------LANSFDEAKSRSEEAAYARIMA 397
             K  I +       + L    I A  AL  +      L++  ++   R       +I  
Sbjct: 337 GPKVRIVEHEDVRRMLMLQKSCIEAIRALILKSCYYLDLSHDSEDPAEREFADGMFQISN 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           P+ K +   MA  +IAEA++  GG GY+ E  + +  R+    SI  G+     LD++
Sbjct: 397 PMCKAYATDMAWPLIAEAIQVHGGYGYVSEYQVEQAARDVKICSIWEGTNFIQSLDLV 454


>gi|294911653|ref|XP_002778031.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239886152|gb|EER09826.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 424

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           IF  E   +   P       IG  GLTE   G+D + + +  +K+ DG + L G K W  
Sbjct: 144 IFGSEEQKSRWLPELAKGTKIGCFGLTEPNHGSDPSGMETTAKKV-DGGWKLHGSKNWIT 202

Query: 236 SSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +SP++D  ++ A+   +G+V  FLV     +    G+   ++  K   R++ T  +   +
Sbjct: 203 NSPIADVCVVWAKCDTDGQVRGFLV-----ETEWKGVSCPKILGKFSLRASPTGMILMDD 257

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
            F   + + ++  G V        L+SA + ++   +  AE     A  Y   R   G  
Sbjct: 258 VF---VPEESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFGRP 314

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD   +I + T ++ R     DE K  S        +  + K   C  A
Sbjct: 315 LAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHSN-------VISMCKRNNCGKA 367

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
            A+  EA + +GG+G ++E  I RH
Sbjct: 368 LAIAREARDMLGGNGIVDEYGIIRH 392


>gi|167897198|ref|ZP_02484600.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
          Length = 1293

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+    VG  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQADGVG--MVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            +    I  G    ++           +L  +L +  +  LG  G++       +++L  E
Sbjct: 989  ARLPRIFEGPTETLL----------AHLGSRLLNGGDDLLGYLGER-----SGALALAAE 1033

Query: 497  DKGLARFLTEK 507
             +GL   L E+
Sbjct: 1034 LRGLGEQLLEE 1044


>gi|126667848|ref|ZP_01738814.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126627664|gb|EAZ98295.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 132/290 (45%), Gaps = 37/290 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S E+              IG L ++E   G+D+ ++    +   D  
Sbjct: 110 TEEQKQQYLPKLLSGEH--------------IGALAMSEPNAGSDVISMKLSAKDAGDH- 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G+K W  + P +  +++ A+ + + G   +   ++E  +P    +Q+L +K+G R 
Sbjct: 155 YVLNGNKMWITNGPDAHVYVIYAKTDVKAGSKGITAFIVERDAPGFSRHQKL-DKLGMRG 213

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL F        N  G L G   V    ++  ++++    A   +  M+ ++   +
Sbjct: 214 SNTCELVFQDCKVPKENILGQLGGGARVLMSGLDYERLVL----AGGPLGIMQAAMDVVV 269

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  + +  +++  +AD+   +  A +  + +A S D  ++  ++AA A + 
Sbjct: 270 PYIRERKQFGQAIGEFELVQGKVADMYTYMNTAKSYVYMVAQSADRGETTRKDAAGAIL- 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +  +MA  +  +A++ +GG+GY+ +    R  R++    I  G+
Sbjct: 329 ------YSAEMATKLALDAIQLLGGNGYVNDYPTGRLLRDAKLYEIGAGT 372


>gi|110835523|ref|YP_694382.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648634|emb|CAL18110.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 147/381 (38%), Gaps = 55/381 (14%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K E  P    L  +   +GL C         V   + +    A   L A    
Sbjct: 24  PHYNQWEKAEIFP--RELWNKMGENGLLC---------VDVPEEYGGFGANFRLSA---- 68

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDW-APKIFSREYDPTNKA--PMQKTSVAIG-LGLTE 204
             ++    + A   +L +   VH D  AP I     +   K   P   T  A+G +G+TE
Sbjct: 69  --VIVEEASRAGFSSLASNISVHSDIVAPYILHLGNEEQKKTWLPKMVTGEAVGAIGMTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+  + ++  K  DG Y ++G K F+++    D  ++  + +   G   +     
Sbjct: 127 PGAGSDLQGLKARADKDGDG-YSINGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPV 309
           D + +G    R   K+G  +  T EL F N               F  L+ +L     P 
Sbjct: 186 DCTLDGFARGRNLEKMGLHAADTSELFFENVKVGAEQILGGEGKGFANLMNEL-----PR 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E    LI    A+ +  GM   +   I Y + R   G  +      +  +AD+   +   
Sbjct: 241 ER---LILALGAVAACEGM---IERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVIN 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   +    +D ++  +  A+ A++ A        ++   V  + ++  GG GY++E  
Sbjct: 295 RAYCEQCIEQYDRSELTATNASIAKLTA-------TELQGVVADKCLQLFGGYGYMQEYP 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I+R Y ++    I  G+   M
Sbjct: 348 ISRDYVDARIQRIYGGTSEIM 368


>gi|157111111|ref|XP_001651395.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108878541|gb|EAT42766.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 402

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 21/255 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA++++ ++   G + L+G K W  S+  + + I+ A ++  +    +
Sbjct: 140 FALSESDAGSDVAALSTKAKQ-DGGDWILNGSKAWVTSAKEAKSGIVFATIDPELKYKGI 198

Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310
              L D  + +GL   R ++K+G R+++T  L F       SN  G + G   V+   ++
Sbjct: 199 TAFLIDFENLDGLKIGRNEDKLGIRASSTCGLHFNNVRIPGSNVLGKVGGGFRVAMEQLD 258

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +I I   S  + +S  + +L  A  YA +R   G  L     ++  IA++A+ I  A 
Sbjct: 259 RARIGIA--SQALGIS--QAALETASQYAEQRIAFGQPLSKLHSVQTRIAEMAVRIETAR 314

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  + A   D    R ++A  A  MA   K+   + A        + +GG GY+++   
Sbjct: 315 LLIRKAATEVD----RGQQATKAISMA---KWVAGETATFAAHNCQQIMGGMGYVKDMPA 367

Query: 431 ARHYRESPANSILLG 445
            R+YR++    I  G
Sbjct: 368 ERYYRDARITEIYGG 382


>gi|309812263|ref|ZP_07706018.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433568|gb|EFP57445.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 384

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 41/311 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            VT+  +V+L T  +  K + P++ + E             + + +G+TE  GG+D+A +
Sbjct: 94  DVTAPYIVSLGTEEQKQK-YLPRVATGE-------------LILSIGMTEPSGGSDLANL 139

Query: 215 TSQGQKISDGI--YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            S   K  DG   + L+G K F+++    D  ++ A+ +   G   +   L +    G  
Sbjct: 140 KSTAVKADDGSGDWILNGSKTFITNGHQCDVAVVAARTDPSKGAKGISLFLVEAGTEGFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVS 326
                +K+G   + T EL F N       LLG  ++  G +  MK L    + +AI +++
Sbjct: 200 KGNKLDKVGQVESDTSELFFDNVRLPADALLGPQDL--GFIAMMKHLPQERIGNAIANIA 257

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381
             +  LAE I Y + R   G     QP+         IA++   I  + A         D
Sbjct: 258 NAKQILAETIQYCKDRKAFG-----QPIGSFQHNTFKIAEMVTKIEVSEAY-------ID 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  +   E     + A   K+W  ++   V+ E ++  GG GY+ E  +AR +R++  + 
Sbjct: 306 DCVAAHAEGKLTAVDAAKAKWWAAQVQCDVLDECVQLHGGYGYMNEYRVARAWRDARVHK 365

Query: 442 ILLGSGNAMVL 452
           I  GS   M +
Sbjct: 366 IWAGSNEIMKM 376


>gi|296127050|ref|YP_003634302.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
 gi|296018866|gb|ADG72103.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
          Length = 641

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +   D  Y L+G K F+++ + ++ +++ A     +G   +
Sbjct: 124 FGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAETYVVFAVTTPGIGTRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  +    +K+G R++AT +L F N     +   N+     +  KI +  
Sbjct: 183 SAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNV---KVPKENLLGKEGQGFKIAMQT 239

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+A  + AA  L
Sbjct: 240 LDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAFKLADMATKLRAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA- 431
            +  A   D  +    E+A A++       +  ++   V+ +A++  GG+GYI+   I  
Sbjct: 300 IYSAAAKKDRHEPYGTESAMAKL-------YASEIGLEVVNQALQIHGGNGYIKGAYIVE 352

Query: 432 RHYRESPANSILLGS 446
           R YR++   +I  G+
Sbjct: 353 RAYRDAKICTIYEGT 367


>gi|148656963|ref|YP_001277168.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569073|gb|ABQ91218.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 381

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 25/288 (8%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P+  S E                 + +TE   G+D+AAI +   +  D +Y
Sbjct: 104 TPDQRRRWLPRCVSGE-------------CITAIAMTEPGAGSDLAAIRTTALRDGD-VY 149

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+S+  ++D  I+ A+     G   +  L+ +    G    R   KIG  +  
Sbjct: 150 LLNGQKTFISNGILNDLVIVAAKTNPEAGHKGISLLVVERDMPGYERGRRLEKIGLHAQD 209

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F N       LLG+       + +      L  A+ +V+   V+L + I Y R R
Sbjct: 210 TAELFFHNVRVPRDHLLGEEGQGFRYLMEQLPRERLAIAVGAVAAAEVALEQTIRYCRER 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     ++  +A++  ++        +   + +  +  +E AA A       K+
Sbjct: 270 EAFGRPIGALQSVRFTLAELVTEVQIGRVFVDQCVLALNRGELTAETAAMA-------KW 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W  ++   V+   ++  GG GY+ E  IAR + ++   +I  G+   M
Sbjct: 323 WTTELQQRVVHACLQLHGGYGYMREYPIARAFLDARVQTIYGGTTEIM 370


>gi|318059984|ref|ZP_07978707.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318079733|ref|ZP_07987065.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 383

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+T++  +  D  + L+G K F+++   +D  ++ A+     G      
Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308
           FLVP     G+P G   + L  K+G R  AT EL           LLG      +V+   
Sbjct: 184 FLVP----TGTP-GFERRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   ++ +    A   V   + +L  A+ +A+ R   G  +    +++  +ADIALD+ A
Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R+A+  D  +  +  A+ A++ A        + A      A++  GG GYI+E 
Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++   ++  G+
Sbjct: 348 PVGKLLRDARVMTLYEGT 365


>gi|221235191|ref|YP_002517627.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|220964363|gb|ACL95719.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 386

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 39/290 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++  + +++ D  Y
Sbjct: 111 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQVGD-RY 156

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+G K W  ++P +D  ++ A+  EG  G   F+V + ++     G    +  +K+G R
Sbjct: 157 ILNGTKFWITNAPHADTLVVYAKTGEGSRGITAFIVEKGMK-----GFSVSKKLDKMGMR 211

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAI 336
            + T EL F +     + + NV       + +L+     + A+++      M+  L   +
Sbjct: 212 GSDTAELVFEDC---EIPEENVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDVVL 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  +    +M+  IAD+ + + +A A  + +A + D  K+   +AA A +M
Sbjct: 269 PYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGKTTRFDAAGAILM 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 329 A-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 371


>gi|126436328|ref|YP_001072019.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236128|gb|ABN99528.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 382

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253
           + +TE   G+D+A + +   +  D  Y ++G K F++  + +D  +++A+        R 
Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRR 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G  L+  ++EDG P G    R   K+G +   T EL F++       LLG+   +   + 
Sbjct: 183 GLSLI--VVEDGMP-GFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLG 239

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAA 369
                  L  A+ SV+  R +L   I Y + R   G  +      K  +A ++ ++ AA 
Sbjct: 240 HNLAQERLTVAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEVEAAQ 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T L   + +  D   SR + A          K +C +M    +   ++  GG GY+ E  
Sbjct: 300 TMLDRAVLDHVDGVLSREDAAR--------VKLFCTEMQARAVDRCLQLFGGYGYMMEYP 351

Query: 430 IARHYRESPANSILLGSGNAM 450
           IAR Y ++    I  G+   M
Sbjct: 352 IARLYNDARVARIYAGTSEVM 372


>gi|56695494|ref|YP_165842.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56677231|gb|AAV93897.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 30/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ A+ +  +K  +  Y ++G K F+++  + D  I++A+ +  +G   V
Sbjct: 127 IAMTEPGTGSDLQAVRTTAEKDGNS-YRINGSKIFITNGQTADLIIVVAKTDKTLGSKGV 185

Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPVED-- 311
             + LE     G    R   K+G ++N T EL F         D+ V      GP E   
Sbjct: 186 SLIALETEGAEGFRRGRNLKKLGMKANDTAELFFE--------DVKVPMTNLIGPEEGHG 237

Query: 312 ----MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               MK L +  L   IM++  +  +LAE + Y + R   G  ++D         +    
Sbjct: 238 FYQLMKQLPWERLTIGIMALGAIDFALAETVKYVQERKAFGQRVMD-------FQNTRFK 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +A     +  L +  ++   R E        A + KY+  ++   ++ E ++  GG G++
Sbjct: 291 LAECKTKAEVLRSFVNDCIGRLEAGQLDAATASMVKYYGSEVQNEIMHECLQLFGGYGFM 350

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IAR Y ++    I  G+   M
Sbjct: 351 MEYPIARLYADARVQMIYGGTNEVM 375


>gi|83945478|ref|ZP_00957825.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851054|gb|EAP88912.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 390

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 26/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMRLKAVKKGDH-YVLNGNKMWITNGPSADTLVVYAKTDPEAGSKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G + G + V       
Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSETGELVFEDCEVPEENVLGQVGGGVRVL------ 243

Query: 312 MKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M  L Y  + + S  V  M+  +   + Y   R   G  + +  +++  IAD+   + A+
Sbjct: 244 MSGLDYERAVLASGPVGIMQACMDVVMPYVHERKQFGQPIGEFQLIQGKIADMYTRMNAS 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  K+  ++AA   + A      C         +A++ +GG+GYI E  
Sbjct: 304 RAYVYAVAQACDAGKTTRQDAAGVILFAAEAATQCA-------LDAIQILGGNGYINEYP 356

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
             R  R++    I  G+G + V  +L
Sbjct: 357 TGRLLRDAKLYEI--GAGTSEVRRML 380


>gi|332308288|ref|YP_004436139.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175617|gb|AEE24871.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 384

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 131/286 (45%), Gaps = 26/286 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     +   +G++E   G+D+A + +  +   D  Y ++G K W  ++  +D   +LA
Sbjct: 112 APAVAGEMVACIGVSEPGAGSDVAGLKTTAKSDGDD-YVINGSKMWITNATQADWICLLA 170

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
              EG V       ++   +P G+   +  NK+G R++ T ++ F++        +G+ N
Sbjct: 171 NTSEGNVHTNKSLIVVPLDTP-GIEISKPLNKLGMRASDTGQIFFNDVRVPKRHCIGEEN 229

Query: 304 VSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                   M+++ + +  + + +    GM   +   I + + RH  G  +++  V+   +
Sbjct: 230 KGF----TMQMMQFQEERMYAAASAHKGMERMIQNTIEWCKERHTFGQPVLNNQVVHFRL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++ A  AL++R      +     E+A Y   +A + K    ++   V    ++  
Sbjct: 286 AELQTEVEALRALTWRAC----QQHVNGEDATY---LASMAKLKSGRLWREVTDSCLQYW 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG G++ +  IAR YR++   SI  GS   M    L ++ K  ++F
Sbjct: 339 GGMGFMWDNPIARAYRDTRILSIAGGSDEMM----LGIIAKHMDIF 380


>gi|262368204|ref|ZP_06061533.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315882|gb|EEY96920.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 431

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 28/227 (12%)

Query: 223 DGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG Y + G K   L +  +D F++ A++ G+   F++ R         + +++    +G 
Sbjct: 221 DGQYFIQGEKTLVLLAESADIFLVNAELNGQAEVFILRR------DESIQFKK-SPAMGL 273

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI----- 336
           ++  T  L F+ T    LGD        ED     +LD   +    M V   EAI     
Sbjct: 274 KATETATLIFNQTPALRLGD--------EDFNYTAFLDLGNLMWCSMAVGTCEAIKKYCI 325

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +  +  +   IAD+A++I A   L    A+  +  ++   EA  AR++
Sbjct: 326 EYANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAESGQTFHREAYLARLL 385

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  C + +  +  + ++ +GG G+ +E  + R YR+  A +I+
Sbjct: 386 -------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIV 425


>gi|226954432|ref|ZP_03824896.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834781|gb|EEH67164.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 600

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 34/288 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  I ++ +  SDG Y ++G K F+S+   D       I+LA++ G     
Sbjct: 166 LTESHAGSDLGIIRTKAEPQSDGSYAITGEKIFISAGEHDMAENIVHIVLARLPGAPKGT 225

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    +++K+G   NAT  + F    G+L+G  N  
Sbjct: 226 KGISLFIVPKFNVNADGSLGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353
              +        + +A+  ++    S   A+ YA+     R +SG          +I  P
Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407
            ++  +           AL   L+   D  E  +  E+  ++     ++ PI K +  + 
Sbjct: 346 AVRNMLLTQKAFAEGGRALVHLLSLHADIVEQGATEEDRKFSDNILSLLTPIAKAFLTET 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                   ++  GG G+I E  + +  R++    +  G+     LD+L
Sbjct: 406 GYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453


>gi|91225739|ref|ZP_01260768.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91189628|gb|EAS75903.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVISMQLKAENKGDH-FVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G  + +  +K+G R + T EL F++       +LG+LN     VE +   
Sbjct: 189 TAFIIERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  IAD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHEREQFGKPIGEFQLVQGKIADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D   +  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 306 VYTVAAACDRGNATRKDAAGAIL-------YSAELATQMALDAIQLLGGNGYINEYPAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|326383653|ref|ZP_08205339.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197737|gb|EGD54925.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 387

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 31/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           LTE   G++ A + ++  +  +G + + G K F++ +P ++ F+  A+          + 
Sbjct: 122 LTEPGAGSNPAGLRTKAVRQENGDWVIDGSKCFITNAPTANLFVTFARTRAADADGPGIA 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            FLVP     G   G+       K+G   + T ++ F      +        G  ED+  
Sbjct: 182 VFLVP-----GDTPGISVADHDRKMGQEGSWTADVHFDG----VRVPATALVGGSEDVGY 232

Query: 313 -KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILI-DQPVMKRAIADIALDI 366
              ++ L    + +SG+ V  A+       RH +    GG  I D  +++  +AD+   +
Sbjct: 233 RAAMVSLARGRVHISGLAVGAAQRALDESLRHAAVTTQGGTPIGDFQLVQAHLADMQTQL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  AL+   A     AK  SEE    RI   + K +C +M   V  +A++  GGSGY+ 
Sbjct: 293 MAGRALARDAA-----AKWVSEEDR--RIAPSVAKLFCTEMVGEVADKAVQIHGGSGYMR 345

Query: 427 ERSIARHYRE 436
           E  + R YR+
Sbjct: 346 EMPVERIYRD 355


>gi|294942138|ref|XP_002783395.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239895850|gb|EER15191.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 424

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           IF  E   +   P       IG  GLTE   G+D + + +  +K+ DG + L G K W  
Sbjct: 144 IFGSEEQKSRWLPELAKGTKIGCFGLTEPNHGSDPSGMETTAKKV-DGGWKLHGSKNWIT 202

Query: 236 SSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +SP++D  ++ A+   +G+V  FLV     +    G+   ++  K   R++ T  +   +
Sbjct: 203 NSPIADVCVVWAKCDTDGQVRGFLV-----ETEWKGVSCPKILGKFSLRASPTGMILMDD 257

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
            F   + + ++  G V        L+SA + ++   +  AE     A  Y   R   G  
Sbjct: 258 VF---VPEESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFGRP 314

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD   +I + T ++ R     DE K  S        +  + K   C  A
Sbjct: 315 LAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHSN-------VISMCKRNNCGKA 367

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
            A+  EA + +GG+G ++E  I RH
Sbjct: 368 LAIAREARDMLGGNGIVDEYGIIRH 392


>gi|254419633|ref|ZP_05033357.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185810|gb|EDX80786.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 22/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   +  D  Y L+G K F+S +  SD ++++ +  G     +   
Sbjct: 124 LTEPGSGSDAAALRTTAVRDGDH-YVLNGSKAFISGAGTSDVYVVMVRTGGEGPKGVSAI 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMK 313
           + E G+P GL +   + K+G  +  T  ++F +       LLGD       +   ++  +
Sbjct: 183 VAEAGTP-GLSFGAQERKMGWNAQPTAIVQFDDCRVPVANLLGDEGAGFRYAMAGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G R++L  A  Y   R   G  + +  V++  +AD+A D+ A   + 
Sbjct: 242 LNI----AACSLGGARLALETAQDYVATRKQFGRPIGEFQVLQFRLADMATDLEAGRLMV 297

Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            R A + D +   +++  A A+ +A      C ++A     EA++  GG GY+++  + R
Sbjct: 298 LRGAWAIDTDHPGKTKWCAMAKRLATDA---CFQIAD----EALQLHGGYGYLKDYPLER 350

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
             R+   + IL G+   M + +   L +G
Sbjct: 351 IVRDLRVHRILEGTNEIMRVIIARELARG 379


>gi|118465257|ref|YP_881753.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118166544|gb|ABK67441.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 45/300 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223
           +TT    + W PK  S EY              IG + ++E   G+D+A I +  +   D
Sbjct: 102 LTTEEQKERWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+S+ +    ++ A          G  L+  ++EDG   G    R  +KI
Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330
           G  S  T EL F +       L+G+LN      VS  P E + +  Y      ++   R 
Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L     YA  R   G  +    V +  +A++   + AA     +   S ++     ++A
Sbjct: 258 ALDLTKTYASERTAFGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K+W  ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M
Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370


>gi|86141700|ref|ZP_01060224.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
 gi|85831263|gb|EAQ49719.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
          Length = 392

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G++   + +  +   D  Y L+G K W  ++P +D  ++ A+ E GR+   +
Sbjct: 136 FGLTEPDHGSNPGGMVTNFKDKGDH-YLLNGAKMWISNAPFADIAVVWAKDESGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F N     +   N+          L+ 
Sbjct: 195 VERGME-----GFSTPTTHNKWSLRASATGELIFDNV---KIPKENLLPNKSGLGAPLMC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  L
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYAKEREQFGKPIGSFQLQQKKLAEMITEITKAQLL 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RL    +E K+ S + + A       K    +MA  +  EA + +GG G   E SI R
Sbjct: 307 AWRLGALRNEDKATSAQISMA-------KRNNVEMALKIAREARQILGGMGITGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|269967505|ref|ZP_06181561.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269827887|gb|EEZ82165.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVISMQLKAENKGDH-FVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G  + +  +K+G R + T EL F++       +LG+LN     VE +   
Sbjct: 189 TAFIIERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  IAD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHEREQFGKSIGEFQLVQGKIADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D   +  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 306 VYTVAAACDRGNATRKDAAGAIL-------YSAELATQMALDAIQLLGGNGYINEYPAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|194016026|ref|ZP_03054641.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194012381|gb|EDW21948.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 25/256 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D   + +  QK     Y L+G K W     ++D FI++A+   +V  FLV
Sbjct: 120 FALSEPNIGSDANHVETSYQKEGQS-YVLNGKKKWISFGAIADFFIVIARDGEQVTAFLV 178

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKIL 315
            R        G+  +R+   + NR++   E+    T   +    +   GPV    +  + 
Sbjct: 179 DR-----DQPGVEIERITGMMANRASYLAEI----TLDHVQVHEDCVLGPVGGGFNHVVS 229

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + LD    SV+   +++A+      + Y+R+R      L    ++K  I D    + AA 
Sbjct: 230 LALDHGRYSVAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHAAR 289

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL  + A    EA         A     I KY+  K+A  +    ++  GGSG+  E S 
Sbjct: 290 ALCLK-AGEMREANHPD-----AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSRENSA 343

Query: 431 ARHYRESPANSILLGS 446
           +R YRE+    I+ G+
Sbjct: 344 SRLYREAKVLEIIEGT 359


>gi|78060442|ref|YP_367017.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964992|gb|ABB06373.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 383

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 32/252 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D A++ +   +  D  Y ++G K F++ +P +  F ++A+        G 
Sbjct: 122 FALTEPESGSDAASLRTTAIRDGDD-YVVNGTKRFITNAPHAGIFTLMARTNPEDKGSGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V     D    G+ + +   K+G +   T ++ F N       L+G      G  
Sbjct: 181 ISAFIV-----DAKTPGISFGKRDKKMGQKGAHTCDVIFDNVRVPAANLIGGKE-GQGFK 234

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   + ++ + V++AE     A+ YA  R   G  + D  +++  +AD   
Sbjct: 235 TAMKVL---DKGRIHIAAVCVAVAERMLSMALSYAMERKQFGKPIADFQLVQAMLADSKA 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  +    A   D     S EA+ A++ A        +M   V   A++  GG+GY
Sbjct: 292 EIYAARCMVVDAARRRDAKLPVSTEASCAKLFA-------SEMCGRVADRAVQIFGGAGY 344

Query: 425 IEERSIARHYRE 436
           + E  I R YR+
Sbjct: 345 MAEYGIERFYRD 356


>gi|84495355|ref|ZP_00994474.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384848|gb|EAQ00728.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 387

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 34/277 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   +G + +TE   G+D+  I +  ++  D  Y ++G K F+++      +++  
Sbjct: 121 PRMATGELVGAIAMTEPSTGSDLQRIRTTAKRDGDH-YVINGSKTFITNSSHAGLVVIVA 179

Query: 249 VEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             G  G   V  ++ E     G    R+  KIG     T EL F++     G LLGD   
Sbjct: 180 RTGGEGAQGVSLIVAEVDGLEGFERGRVLQKIGQHGQDTRELSFTDMLVPVGNLLGD--- 236

Query: 305 STG----------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           S G          P E + I      A+ +V+    ++  AI Y++ R   G  +     
Sbjct: 237 SEGQGFYQLMLQLPQERLAI------AVGAVASAEKAVELAIAYSKEREAFGKPIGSFQT 290

Query: 355 MKRAIADIALDI-AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++  +A+++ D+ AA T L + +       + R + A  +R      KYW   +   VI 
Sbjct: 291 LRFTLAEVSTDVLAARTFLDYCIGL---HVEGRLDAATASR-----AKYWTTDVQCDVID 342

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++  GG GY+ E  IAR Y  +    I  G+   M
Sbjct: 343 RCLQVFGGYGYMLEYPIARMYAGARVQKIYGGTNEIM 379


>gi|91977767|ref|YP_570426.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684223|gb|ABE40525.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 381

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 23/268 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L
Sbjct: 124 LTEPGSGSDAAALRTRAVRDGDD-YVLNGQKQFISGAGANDLYVVMVRTGGDGPGGISTL 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316
           + D    GL +   + K+G  +  T  + F N        LGD  +        KI +  
Sbjct: 183 VVDKDTPGLSFGANERKMGWNAQPTRSVIFENARVPVANRLGDEGIG------FKIAMAG 236

Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L+ A  S+ G + +L +A+ Y + R   G  L +   ++  IAD+A ++ AA   
Sbjct: 237 LDGGRLNIAACSLGGAQSALDKALGYMKDRKAFGKRLDEFQALQFRIADMATELEAARTF 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A + D     + +      +  + K +   +   V  +A++  GG GY+ E  + +
Sbjct: 297 LWRAAAALDRKDLDASK------LCAMAKRFGTDVGFNVANDALQMHGGYGYLAEYGVEK 350

Query: 433 HYRESPANSILLGSGNAMVLDVL-NLLE 459
             R+   + IL G+   M L V   LLE
Sbjct: 351 IVRDLRVHQILEGTNEIMRLIVARKLLE 378


>gi|193078427|gb|ABO13413.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 387

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + I DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAIRDGDNYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQENAGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     +   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377


>gi|195377629|ref|XP_002047591.1| GJ13529 [Drosophila virilis]
 gi|194154749|gb|EDW69933.1| GJ13529 [Drosophila virilis]
          Length = 414

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y L+G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVLNGTKMWISNSDVAGVFLVFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  + F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + +    V LA+      I Y   R   G  + +   M+  IA I
Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATI 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  L++  A   +      +EAA A       K++  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCIDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCVKK 410


>gi|156357138|ref|XP_001624080.1| predicted protein [Nematostella vectensis]
 gi|156210834|gb|EDO31980.1| predicted protein [Nematostella vectensis]
          Length = 422

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 39/287 (13%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S E+              IG L ++E   G+D+ ++  +  K  D  Y L+G
Sbjct: 146 RKYLPKLLSGEH--------------IGALAMSEANAGSDVVSMKLRADKDGDH-YVLNG 190

Query: 231 HK-WFLSSPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           HK W  + P +D  I+ A+        E  +  FLV    E G P G       +K+G R
Sbjct: 191 HKMWITNGPDADVLIVYAKTNPSSKKPEHAITTFLV----EKGMP-GFSTSPKLDKLGMR 245

Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T EL F N       ++G++N     +     +  L  A   V  M+  L   + Y 
Sbjct: 246 GSNTCELVFDNCRIPAENVMGEVNKGVYVLMSGLDIERLILAAGPVGLMQACLDVTVPYL 305

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +M+  +AD+   + A  +  + +A + D     +++ A A I+   
Sbjct: 306 HARTAFGQKIGEFQMMQGKMADMYTRLNACRSYLYTVARACDAGHISNKDCA-AIIL--- 361

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +  + A  V  +A++C+GG+GYI +    R  R++    I  G+
Sbjct: 362 ---YTAENATQVALDAIQCLGGNGYINDYPTGRFLRDAKLYEIGAGT 405


>gi|150025259|ref|YP_001296085.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771800|emb|CAL43274.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 118/257 (45%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+A + +   K  +  + ++G K F+++ + +D +++ A+    +G   +
Sbjct: 125 LCVTEPFGGSDVAGMRTTAVKQGNK-FIINGSKTFITNGIYADYYVVAAKTSPELGNKGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L D +  G+   +L +K+G R++ T E+ F N       L+G+       +      
Sbjct: 184 SIFLVDTNLKGITATKL-DKLGWRASDTAEIAFDNVEIPEENLMGEQGKGFPYIMQHFAF 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  AI + +    ++   I+Y  +R   G  +     ++  I + A +I      ++ 
Sbjct: 243 ERLIMAINAHARAEYAIEYTINYMSQREAFGTTINKFQALRHTIVEHATEIEHCKIFNYA 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D+ +   +EA  A++ +        K+A   I + ++ +GG GY+EE  +AR  R
Sbjct: 303 ATARLDQGEYVVKEATMAKLKS-------TKVADLAIYDCLQMLGGYGYMEEYPLARLLR 355

Query: 436 ESPANSILLGSGNAMVL 452
           +S    I  G G + +L
Sbjct: 356 DSRLGPI--GGGTSEIL 370


>gi|282878200|ref|ZP_06286996.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           buccalis ATCC 35310]
 gi|281299618|gb|EFA91991.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           buccalis ATCC 35310]
          Length = 574

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 24/289 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKASYDEKEDCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + ++NK+G   + T EL + N    L G  +   G ++ +  L
Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288

Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A  SV   + +  EA+ YA+ R   G  +I+ P +   ++ +   + A  +L
Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEALAYAKERQQFGQAIIEFPAVYDMLSRMKAKLDAGRSL 348

Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415
            ++ A   D               A+ R+E   Y R+     P+ K    + A     +A
Sbjct: 349 LYQTARYVDLYKALEDIQRDRKLSAEERAEMKKYTRLADAFTPLAKGMNSEYANENAYDA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +   GGSG+I      R +R++   SI  G+    V+  +  +  GT L
Sbjct: 409 ISVHGGSGFIMAYKSQRLFRDARIFSIYEGTTQLQVVAAIRYIMNGTYL 457


>gi|294886647|ref|XP_002771802.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239875564|gb|EER03618.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 436

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 25/266 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255
           + L +TE   G+D+A I +      DG  Y ++G K F++S P +D F   A   G  G 
Sbjct: 175 LALAVTEPYAGSDVANIRTTAVLQPDGKHYLVNGMKTFITSGPWADYFTT-AVGSGDSGL 233

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L   L+ D +  G+   RL  + G +S+ T  + F +       L+G        +   
Sbjct: 234 SL---LMIDRTLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGFKAIMHN 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ S    R+ + +AI YA+ R   G  LID  V++  IA++A  + A    
Sbjct: 290 FNHERLMLALQSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRVLATHYY 349

Query: 373 SFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +A  + ++ S+SE   + A  ++ A  T  +C +       EA + +GG  Y++   
Sbjct: 350 IENIAIQWPQS-SQSELAGKVALLKVQATKTFEFCAR-------EASQVLGGRSYLQGSG 401

Query: 430 ----IARHYRESPANSILLGSGNAMV 451
               I R YRE   N+I  GS   M+
Sbjct: 402 PGARIERLYREVRVNAIGGGSEEIML 427


>gi|212636203|ref|YP_002312728.1| isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557687|gb|ACJ30141.1| Isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 138/308 (44%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   T   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G    +  +K+G R + T EL F       + + N+  G    +K+L+  LD   +
Sbjct: 195 RGFKGFTQAQKLDKLGMRGSNTCELVFEEC---EVPEENILGGLNNGVKVLMSGLDYERV 251

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +SG  + +  A     + Y   R   G  +    +++  +AD+   + AA +  + +A 
Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R++ 
Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 365 LYEIGAGT 372


>gi|167921798|ref|ZP_02508889.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 1293

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+    VG  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQADGVG--MVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            +    I  G    ++           +L  +L +  +  LG  G++       +++L  E
Sbjct: 989  ARLPRIFEGPTETLL----------AHLGSRLLNGGDDLLGYLGER-----SGALALAAE 1033

Query: 497  DKGLARFLTEK 507
             +GL   L E+
Sbjct: 1034 LRGLGEQLLEE 1044


>gi|85858915|ref|YP_461117.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85722006|gb|ABC76949.1| acyl-CoA dehydrogenase, long-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 23/266 (8%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +   +G+TE   G+D+AAI +      D I  L+G K F+S+ ++   I+L   +  V 
Sbjct: 127 DIITAIGMTEPNTGSDLAAIRTTAVADRDEI-VLNGQKTFISNGINCDLIVLVARDPAVE 185

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
                +   L+E G+P G    R   KIG  S  T EL F       +N  G        
Sbjct: 186 DPHKAIDLYLVEAGTP-GFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGTGFRK 244

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++  ++++ + + +M+       L   I Y R R V G  +      +   A++A 
Sbjct: 245 MMEMLQQERLVVAIGAQVMA----EFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMAT 300

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        ++     E +  + E + A       KYW   MA  V    ++  GG GY
Sbjct: 301 EIEIGRTFLDKMIVEHMEGRDLTREMSMA-------KYWITDMAGRVADRCLQLHGGYGY 353

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
            EE  IAR +R+     I  GS   M
Sbjct: 354 CEEYPIARAWRDIRIMRIYAGSNEIM 379


>gi|16124334|ref|NP_418898.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           CB15]
 gi|221233016|ref|YP_002515452.1| long-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13421178|gb|AAK22066.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           CB15]
 gi|220962188|gb|ACL93544.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           NA1000]
          Length = 391

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 44/276 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGC 255
           + +TE   G+D+  I +  +K  +  Y ++G K F+++  +   I ++A+ +   G  G 
Sbjct: 131 IAMTEPGAGSDLQGIKTTAKKAGNQ-YVINGSKTFITNGQTANLICVVAKTDPAGGARGT 189

Query: 256 FLVPRLLEDGSPNGLC--YQRLKN--KIGNRSNATVELEFSNT---------------FG 296
            L+   +E   P+GL   ++R +N  K+G  +  T EL F++                F 
Sbjct: 190 SLI--FVETDGPDGLLEGFERGRNLDKLGQEAQDTSELFFNDVKVPTENLLGTDEGQGFF 247

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G L     P E + I      A+  ++ +  +L   I Y + R   G  +ID    +
Sbjct: 248 QLMGQL-----PQERLNI------AVQGMATIERALELTIAYVKDRKAFGKAIIDFQNTQ 296

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+   +   A            E K  +  A+ A       KYW   +   ++   +
Sbjct: 297 FVLAECKTEATVAKVFVNHCIGQHLEGKLDAATASMA-------KYWVSDLENKIVDRCL 349

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +  GG G++ E  IAR Y++S    I  G+   M L
Sbjct: 350 QLFGGYGFMNEYPIARMYKDSRIQRIYGGTNEIMKL 385


>gi|254472292|ref|ZP_05085692.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211958575|gb|EEA93775.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 399

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D A + ++  K   G Y ++G K W  +SP++D F++ A+ E    ++  
Sbjct: 141 FGLTEPDAGSDPAGMRTRAVKTESG-YRITGSKMWISNSPIADVFVVWAKSEAHDNQIRG 199

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + +E     GL   +++ K+  R++ T E+   N       LL +++   GP    
Sbjct: 200 FVLEKGME-----GLSAPKIEGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP---- 250

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +I+
Sbjct: 251 --FGCLNRARYGISWGALGAAEDCWMRARQYGMDRKQFNRPLAQTQLFQKKLADMQTEIS 308

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+   FDE +   E       M  I K   C  A  +  +A +  GG+G  EE
Sbjct: 309 LGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEE 361

Query: 428 RSIARH 433
             + RH
Sbjct: 362 FMVMRH 367


>gi|148225687|ref|NP_001086623.1| glutaryl-CoA dehydrogenase [Xenopus laevis]
 gi|50603795|gb|AAH77194.1| Gcdh-prov protein [Xenopus laevis]
          Length = 440

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D A + ++ +   S   Y L+G K W  +SP++D  ++ A  E GRV  F
Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGSKTWITNSPIADLCVVWAVCEDGRVRGF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L+ R        GL   ++K K   R++AT       VE+   N    LL  ++   GP 
Sbjct: 239 LIER-----GTKGLSTPKIKGKFSLRASATGMILMEDVEIPEEN----LLPKISGMGGPF 289

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   +S   +  AE   +  R++    I    P+     +++ +AD+  
Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI        RL    DE ++  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 344 DITIGLQACLRLGRLKDEKRAAPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 397 SDEYHIIRH 405


>gi|325193598|emb|CCA27878.1| mediumchain specific acylCoA dehydrogenase putative [Albugo
           laibachii Nc14]
          Length = 423

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+AA+ +   K  D  + ++G K W  +  ++D + +LA+ +          
Sbjct: 165 VTEPGAGSDVAALRTSAVKKGDK-WVINGTKMWITNGSVADWYFVLAKTDANAKARKAFS 223

Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V     D +  G+   R +  +G R + T  + F       + + N+   P +  +I
Sbjct: 224 GFIV-----DANSPGITVGRKEINMGQRCSDTRSITFEEV---AVPEANLLGQPGDGFRI 275

Query: 315 LIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +          AI+SV   R +  EA  Y+  R   G  +     +   +AD+A  I A
Sbjct: 276 AMQAFDITRPPVAIISVGLARRAFEEAQKYSMERKTMGAPIATHQAVSFMLADMATGIEA 335

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              LS+R A   D  +S +       + A + K +    A    A+A++  GG+G+  E 
Sbjct: 336 GRMLSYRAAYELDCGRSNT-------LYASMAKRFAADHANQCAADAVQIFGGAGFNTEY 388

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 389 PVEKLMRDAKILQIYEGT 406


>gi|313231691|emb|CBY08804.1| unnamed protein product [Oikopleura dioica]
          Length = 411

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 21/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-CFL 257
           L ++E   G+D+ ++  +  K  D  + L+G K W  + P +D  I+ A+ +        
Sbjct: 151 LAMSETGSGSDVMSMKIRADKKGDH-WILNGTKMWITNGPTADTMIIYARTDQDCKPAHG 209

Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   + DG+  G  C QRL +K+G R + T EL F N     + + N+  G  +   +L+
Sbjct: 210 ITAFIVDGNAEGFHCAQRL-DKLGMRGSPTGELVFENV---AVHEDNILGGIGQGAYVLM 265

Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+   + +SG  V L +A     I YA  R   G  + +  +++  IAD+   ++A+ 
Sbjct: 266 SGLNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLVQGKIADMYTTLSASR 325

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  +++A + D     + + A   +       +  + A  V  +A++ +GG+GYI +   
Sbjct: 326 SYLYQVARAADNGHFNNADCAGIIL-------YTAEKATQVCLDAIQILGGNGYINDYPT 378

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 379 GRFLRDAKLYEIGAGT 394


>gi|325676114|ref|ZP_08155795.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553024|gb|EGD22705.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 391

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 32/257 (12%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR- 252
           +V     LTE   G++ A + ++ ++ S G + L G K F++ +P++D F++ A+     
Sbjct: 122 AVVASFALTEPGAGSNPAGLRTKAER-SGGEWVLDGEKRFITNAPIADLFVVFARTRPAD 180

Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +  FLVP         G+       K+G     T ++ F    G  + D  +  G
Sbjct: 181 EKGPGIAVFLVP-----ADTPGVTVGAKDAKMGQEGAWTADVHFD---GVRVPDTAL-VG 231

Query: 308 PVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             ED+     + S        A ++V   + +L E++ YA      G  + +  +++  I
Sbjct: 232 GNEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGNFQLVQAMI 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD    + A  AL    A ++   + R       RI   + K +C +MA  V   A++  
Sbjct: 292 ADQQTQVMAGRALVRDAARAWVSGEDR-------RIAPSVAKLFCTEMAGRVADLAVQVH 344

Query: 420 GGSGYIEERSIARHYRE 436
           GGSGY+ E  + R YR+
Sbjct: 345 GGSGYMREVPVERIYRD 361


>gi|295695450|ref|YP_003588688.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411052|gb|ADG05544.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 32/251 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
            GLTE   G+D A+ T     + DG + L+G K F+++      +++  V  R      +
Sbjct: 123 FGLTEPGAGSD-ASGTRTTAVLEDGFWRLNGSKNFITNAGYARSVVVTAVTDREKGAKGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP         G        K+G R + TVE     T      LLG +        
Sbjct: 182 SAFIVPT-----DNPGFRVTTTYEKLGLRGSNTVEFVLDETVIPEDHLLGAVGEGY---- 232

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALD 365
             + LI LD   +S+  + V +A A +     YA+ R   G  +     ++  +AD+A+ 
Sbjct: 233 -KQFLITLDGGRISIGALSVGIARAAYEAALSYAKERVQFGRSISKFQAIQFKLADMAMH 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +  + A   D+ +   +EAA A++ A        +MA     +A++  GG GY+
Sbjct: 292 IEMARTMVLKAAWLKDQGRPFKKEAAMAKLFA-------SEMAMRTCDQAIQIHGGYGYM 344

Query: 426 EERSIARHYRE 436
           ++  + R++R+
Sbjct: 345 KDYPVERYFRD 355


>gi|126436719|ref|YP_001072410.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126236519|gb|ABN99919.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 45/300 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223
           +TT      W PK  S EY              IG + ++E   G+D+A I +  +   D
Sbjct: 102 LTTDEQKARWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+S+ +    ++ A          G  L+  ++EDG   G    R  +KI
Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330
           G  S  T EL F +       L+G+LN      VS  P E + +  Y      ++   R 
Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L     YA  R   G  +    V +  IA++   + AA     +   S ++     ++A
Sbjct: 258 ALDLTKAYALERTAFGQPIGKFQVNRHFIAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K+W  ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M
Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370


>gi|86138798|ref|ZP_01057370.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824445|gb|EAQ44648.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 381

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ +K ++G Y L+G+K F+S    SDA++ + +   EG  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRTGEEGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              +EDG+  GL +  L+ K+G +S  T +++F +        +  +    E+ K   Y 
Sbjct: 183 --YVEDGT-KGLSFGGLEEKMGWKSQPTAQVQFDDC------KIPANNLVGEEGKGFKYA 233

Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   +++S   +  A+      + Y   R   G  +     ++  +AD+ +++ AA
Sbjct: 234 MMGLDGGRLNISSCSLGAAQTALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D+       A  A     + K +  +    ++ + ++  GG GY+ +  
Sbjct: 294 RVFLRQAAWKLDQG------ALDASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I +  R+   + IL G+   M
Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368


>gi|332027694|gb|EGI67762.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 422

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 22/268 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  A+ +  +K  DG  Y ++G K W  +S ++  F++ A      G   + 
Sbjct: 165 LTEPNSGSDAFALKTVAKK--DGSDYVINGTKMWISNSDIAGVFLVFANANPSAGYRGIT 222

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
               D    GL   + ++K+G +++ T  + F       SN  G        + G + + 
Sbjct: 223 TFFVDRDTPGLTVGKPEDKLGIKASGTCMVHFDNVRVPESNILGEFGQGYKYAAGFLNEG 282

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           ++ I   + ++ ++  + SL   I Y   R   G  +     M+  IA    D+  A  L
Sbjct: 283 RVGI--GAQMIGIA--QGSLDATIPYTLERKQFGKDVFSFQAMQHQIAQAVTDLECARLL 338

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   D  K   +EAA A+++A  T       A  V  + ++ +GG G+  +    +
Sbjct: 339 VYNAARLVDAKKDVMKEAAMAKLIASET-------ASRVTTKCIDFMGGVGFTTDFPQEK 391

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
           +YR++   +I  G+ N  +  +   + K
Sbjct: 392 YYRDAKIGTIYEGTSNMQLSTIAKCIRK 419


>gi|301061924|ref|ZP_07202654.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444028|gb|EFK08063.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D   ++ + + + DG  Y ++G+K F+++   S   ++ A  +       
Sbjct: 123 FALTEPGAGSD--PVSQKTKAVRDGDSYIINGNKMFITTGKNSHVTVVTAYTDPDKRHRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
           +   + +   NG    + + K+G R++ TVEL F         D  V   P E++     
Sbjct: 181 ISAFVVEKGTNGFSVGKEEKKMGLRASDTVELIFE--------DCRV---PAENLLGQEG 229

Query: 314 -----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +  LD   + +S   + +A+A     + YA  R   G  +     ++  IAD+A
Sbjct: 230 DGFVIAMTSLDGGRIGISSQSLGVAQACLDAAVSYANERVQFGRPISQFQGLRWMIADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+F  A   D  ++ +  A+ A++ A        +MA     +A++  GG G
Sbjct: 290 TQIEAARLLTFNAAAMRDRGENYTAAASMAKVFA-------SEMANRTAYQALQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI+E  + R+YR++   ++  G+
Sbjct: 343 YIQEYPVERYYRDARVFTLYEGT 365


>gi|124009561|ref|ZP_01694235.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123984800|gb|EAY24775.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 389

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y L+G K W  +  ++D ++++AQ     G   +  
Sbjct: 135 LSEPEAGSDATSQRTTAEDKGD-YYLLNGTKNWITNGSIADTYLVIAQTYPEKGQKGINV 193

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
           L+ +    G    + ++K+G R + T  L F++             FGF      ++ G 
Sbjct: 194 LIVEKGMEGFVVGKKEDKLGIRGSDTHSLMFTDVKVPKENRIGDDGFGFRFAMKTLNGG- 252

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               +I I   +  ++     +SL     YA+ R   G  +     +   +AD+A +I A
Sbjct: 253 ----RIGIAAQALGIASGAYELSL----KYAQERKAFGKPIHQHQAIAFKLADMATNIEA 304

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A + D  +       YA++ A + K +  K+A     EA++  GG GY++E 
Sbjct: 305 ARLLVLKAARAKDMGQD------YAQLSA-MAKLFASKVAMETTVEAVQVHGGYGYVKEY 357

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 358 HVERLMRDAKITQIYEGT 375


>gi|227536445|ref|ZP_03966494.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243700|gb|EEI93715.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 386

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  A+ ++  K  DG Y L+G K W  ++P+ D  ++ A
Sbjct: 120 PKLATGELIGSFGLTEPNHGSDPTAMETRLSKDRDG-YILNGAKMWITNAPVCDLAVVWA 178

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  EG+V   +V R ++     G       NK   R++ T EL F +       +L D++
Sbjct: 179 RDEEGKVRGIIVEREMK-----GFTTPETHNKWSLRASKTGELIFEDVRIPQENILPDVS 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
              GP      L  L+SA   +S   +  A      A+ Y+  R   G  +    + ++ 
Sbjct: 234 SMKGP------LSCLNSARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+   +I  A  LS+RL    +E K+  ++ + A       K     MA  +  E+ + 
Sbjct: 288 LAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMA-------KRNNVNMALQIARESRQM 340

Query: 419 IGGSGYIEERSIARH 433
           +G  G + E  I RH
Sbjct: 341 LGAMGIVGEFPIMRH 355


>gi|126436663|ref|YP_001072354.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236463|gb|ABN99863.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 47/294 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W P I S E             + + + +TE   G+D+A I +   +  D  + ++G 
Sbjct: 109 KRWLPGIISGE-------------LIVAVAMTEPGAGSDLAGIKTSAVRDGDD-WIVNGS 154

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+SS ++ D  +++ + +   G      L+ +    G    R  +K+G     T EL 
Sbjct: 155 KTFISSGINCDLVVVVCRTDPEAGHKGFTLLVVEDGMEGFTRGRKLDKMGLHYQDTAELF 214

Query: 291 FSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           F +               F  L+ +L     P E + I      AI +++G R +  + +
Sbjct: 215 FEDVRVPAANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETFRQTL 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  + +    +  +A++  ++        R   +  + +  + EA+ A   
Sbjct: 264 QYAKDRKAFGQSIGNFQHNRFLLAEMDTELEIGEQYIDRCLQAVVDGELTAVEASKA--- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               K+WC + A  VI   ++  GG GY+ E  +AR Y ++   +I  G+   M
Sbjct: 321 ----KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370


>gi|16126411|ref|NP_420975.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13423669|gb|AAK24143.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15]
          Length = 378

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 39/290 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++  + +++ D  Y
Sbjct: 103 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQVGD-RY 148

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+G K W  ++P +D  ++ A+  EG  G   F+V + ++     G    +  +K+G R
Sbjct: 149 ILNGTKFWITNAPHADTLVVYAKTGEGSRGITAFIVEKGMK-----GFSVSKKLDKMGMR 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAI 336
            + T EL F +     + + NV       + +L+     + A+++      M+  L   +
Sbjct: 204 GSDTAELVFEDC---EIPEENVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDVVL 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  +    +M+  IAD+ + + +A A  + +A + D  K+   +AA A +M
Sbjct: 261 PYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGKTTRFDAAGAILM 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 321 A-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 363


>gi|255535084|ref|YP_003095455.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341280|gb|ACU07393.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 595

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 164/400 (41%), Gaps = 81/400 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  ++  +D F   A++E    +  F+
Sbjct: 150 LTEPDAGSDANSGKTKARLSEDGKHYVINGQKMWISNAGFADTFTFFAKIEDDKNITGFV 209

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDL 302
           + R  LED  P  +     ++K+G RS++T ++ F+              N F   L  L
Sbjct: 210 INRSELED--PAQMTMGEEEHKLGIRSSSTRQVYFNDMKVPVENVLGERNNGFKIALNAL 267

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           NV             +  A  ++ G R  LA A  YA  R   G  +     +++ IA++
Sbjct: 268 NVGR-----------IKLAAANLDGQRRILALATQYANERKQFGVAIATFGAVRKKIAEM 316

Query: 363 ALDIAAATALSFRLANSF--------------DEAKSRSEEAAYARIMAPITKYWCCKMA 408
           A  I  + A S+R A                  EA+ +  E  YA +   I K +   + 
Sbjct: 317 ATGIFVSEAGSYRAARDIQDKIDELVAGGMNHQEAELKGVE-EYA-VECSILKVFVSDLT 374

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                E ++  GG G+ E+  +   +R+S  + I  G+     L  + +L K T      
Sbjct: 375 QHTADEGIQIYGGMGFSEDAPMEAAWRDSRISRIYEGTNEINRLLAVGMLIKKTM----- 429

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF--------LTEKIALASSAAALYRA 520
                       K  I +L+ ++++ KE  G+  F        L+E+ AL ++   ++  
Sbjct: 430 ------------KGEIDLLKPAMAVGKELMGIPSFDVPDYSELLSEEKALLTNLKKVFLM 477

Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
               ++   L+   +D     H +L    NA+ I++ +Y+
Sbjct: 478 ----VSGAALQKYMMDIEKQQHLLL----NASEILNQIYM 509


>gi|218781189|ref|YP_002432507.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762573|gb|ACL05039.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 41/268 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRV 253
           +G+TE   G+D+A++ +  +K  D  Y L+G K F+++ P++D  ++ A+ +       V
Sbjct: 125 MGVTEPDAGSDMASMKTTAEKAGDK-YVLNGSKMFITNGPIADVAVVYAKTDPAAKHAGV 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
             F+V    E G+P       LK K+G R++ T EL F+       N  G       +++
Sbjct: 184 SAFIV----EKGTPGFSAGPPLK-KMGVRTSLTSELIFADCEIPAENLLGKEGDGFKMAS 238

Query: 307 GPVE-DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360
             VE D  +L+       +V  +   + +   YA+ R     I  D+P+     +KR +A
Sbjct: 239 QTVEWDRSVLL-----APTVGSVAYLINKCSRYAKDR-----IQFDRPIAEYQAIKRKLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ +   AA +L +R+A + D+ +  +    YA +       W   MAP  + +A+   G
Sbjct: 289 ELKIFEEAARSLVYRIAWAKDQGQPLNH--LYASVAKLFIGDWS--MAP--MNDAVTLHG 342

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448
           G GY +E  + R +R+    +I  G+ +
Sbjct: 343 GYGYCQEYDVERVFRDGRLAAIGGGTSD 370


>gi|197122616|ref|YP_002134567.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172465|gb|ACG73438.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D +A+ +   +  D  + LSG K F++   +  +F++LA+ + GR    +  
Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDA-WALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +LE G  +G   + +  K+G RS+ T +L   E        LG+  V  G ++ ++IL 
Sbjct: 184 FILEPGM-SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGE--VDHGFIDTLQILD 240

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +    ++V   R +L EA  YA+ R   G  + +   +   +AD+A ++ AA  L  
Sbjct: 241 RGRITIGALAVGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  +     A+ A       K +  + A    + A++  GG GY  +  + RH+
Sbjct: 301 RAAALCDAGEPFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353

Query: 435 RESPANSILLGSGNAMV 451
           R++    I  G G + V
Sbjct: 354 RDAKLTEI--GEGTSEV 368


>gi|167722582|ref|ZP_02405818.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
          Length = 669

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 16/270 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G++  AI S  Q++  G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 135 LTEPDAGSNARAIASVAQRVDGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
            L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 193 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 251

Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 252 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 311 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 364

Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465
           +    I  G    ++  + + LL  G +L 
Sbjct: 365 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 394


>gi|302522087|ref|ZP_07274429.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
 gi|302430982|gb|EFL02798.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
          Length = 606

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 127/324 (39%), Gaps = 51/324 (15%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           SRE   T   PM +      + L+E + G+ +A + ++ +   DG   L G+K ++S   
Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTCRLFGNKMWISGGD 209

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRS 283
            +       ++LA+  G       +  F+VP+ L DG     + N +    L +K+G R 
Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGARNDVVLAGLNHKMGYRG 269

Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329
                L F              G+L+G+ N     +  M    +I + L +  +  +G  
Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328

Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378
                A+ YAR R     +    P            ++R +      +  A AL+     
Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+ ++  E AA         I+ PI K W  +      + A++  GG GY  E  + +
Sbjct: 386 LVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
            YR++  N I  G+     LD+L 
Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469


>gi|220917399|ref|YP_002492703.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955253|gb|ACL65637.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D +A+ +   +  D  + LSG K F++   +  +F++LA+ + GR    +  
Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDA-WALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +LE G  +G   + +  K+G RS+ T +L   E        LG+  V  G ++ ++IL 
Sbjct: 184 FILEPGM-SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGE--VDHGFIDTLQILD 240

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +    ++V   R +L EA  YA+ R   G  + +   +   +AD+A ++ AA  L  
Sbjct: 241 RGRITIGALAVGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  +     A+ A       K +  + A    + A++  GG GY  +  + RH+
Sbjct: 301 RAAALCDAGEPFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353

Query: 435 RESPANSILLGSGNAMV 451
           R++    I  G G + V
Sbjct: 354 RDAKLTEI--GEGTSEV 368


>gi|118465055|ref|YP_881103.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166342|gb|ABK67239.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 44/273 (16%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCF 256
           + + +TE   G+D+A I +   +  D  + ++G K F+SS ++ D  +++ + +   G  
Sbjct: 122 VAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKTFISSGINCDLVVVVCRTDPDAGHK 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
                + +   +G    R  +K+G     T EL F N               F  L+ +L
Sbjct: 181 GFTLFVVEAGMDGFTRGRKLDKMGLHYQDTAELNFDNVRVPSANLLGKEGRGFYHLMHNL 240

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357
                P E + I      AI +++G R +  + + YA+ R   G     QP+      + 
Sbjct: 241 -----PSERLSI------AISAIAGARETWRQTLQYAKDRKAFG-----QPIGSFQHNRF 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++  ++        R   +  + +  + EAA A       K+WC + A  VI   ++
Sbjct: 285 MLAEMDTELEIGEQYIDRCLQAVVDGELTAVEAAKA-------KWWCTETAKKVIDGCVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  +AR Y ++   +I  G+   M
Sbjct: 338 LHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370


>gi|56709185|ref|YP_165230.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56680870|gb|AAV97535.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 380

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 44/300 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           ++L  TP    +W P              + ++  AI    LTE + G+D+A  T     
Sbjct: 98  ISLFGTPEQQAEWLP--------------LTRSGQAIAAFALTEPQSGSDVANSTMTATA 143

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y L+G K W  +  ++D + ++A+     G   L   +L  G P     +RL+  
Sbjct: 144 DGDD-YVLNGEKTWISNGGIADVYTLIARTGEAPGARGLSAFVLPAGLPGFEVVERLEVM 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI-LIYLDS-----AIMSVSGMR 329
                +    L F++       LLG       P E  K+ +  LD      A  ++   R
Sbjct: 203 A---PHPLARLRFTDVRVPKSALLG------APGEGFKVAMAVLDVFRSTVAAAALGFAR 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SE 388
            +L E++     R V G  L D  +++  IAD+ALD+ A+  L++R A + D    R S 
Sbjct: 254 RALDESLARVTTRQVQGAPLFDLQMVQGHIADMALDVDASALLTYRAAWAKDMGAPRVSR 313

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA A       K +    A  VI +A++  GG G      +   YR+  A  I  G+ +
Sbjct: 314 EAAMA-------KLYSTDHAQQVIDKAVQLFGGDGVRRGEKVEELYRDIRALRIYEGASD 366


>gi|86135150|ref|ZP_01053732.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85822013|gb|EAQ43160.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 392

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   + +  +   D  Y L+G K W  ++P  D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPNHGSNPGGMETNFKDKGDH-YLLNGAKMWISNAPFCDVAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       LL + +    P      
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNVQVPKENLLPNKSGLGAP------ 243

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDSA   +S   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A
Sbjct: 244 LGCLDSARYGISWGAIGAAMDCYDTALRYAKEREQFGKPIGQFQLQQKKLAEMITEITKA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++RL    +E K+ S + + A       K    +MA  V  EA + +GG G   + S
Sbjct: 304 QLLAWRLGTLKNEGKATSAQISMA-------KRNNVEMALKVAREARQMLGGMGISGDYS 356

Query: 430 IARH 433
           I RH
Sbjct: 357 IMRH 360


>gi|229490551|ref|ZP_04384389.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229322371|gb|EEN88154.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 382

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 14/242 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGD-HYVVNGAKTFITSGVRADFVVAAVRTGGPGAGGVS 182

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G+P G    R   K+G R++ T EL F +       L+G  N     +    + 
Sbjct: 183 LLVIEKGTP-GFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + +     L   + + R R   G  LI +  ++  + ++A  I  A   +  
Sbjct: 242 ERVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHS 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +   +         E  +A+  A  T  W       V  +A++  GG GY++E  + R Y
Sbjct: 302 VIERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|167748220|ref|ZP_02420347.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662]
 gi|317472255|ref|ZP_07931583.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167652212|gb|EDR96341.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662]
 gi|316900212|gb|EFV22198.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D A   +    + DG  Y L+G K F+++ P++D F++ A  +       + 
Sbjct: 125 LTEPEAGSDAAGCKTTA--LWDGEAYVLNGLKCFITNGPLADYFLVFALTDPEKKTKGLS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------ 313
             + + +  G+    ++NK G RS    E+ F N              P E+M       
Sbjct: 183 AFVVEKAMPGVSVGTIENKCGIRSAQVSEIIFENV-----------RVPKENMVGEEGKG 231

Query: 314 ---ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  LD   + V+   + +A+     A+ Y + R   G  L     +   +A++++ 
Sbjct: 232 FAVAMKDLDGGRIGVAAQGLGIAKGAYDIALQYLKDRQQFGKPLCKNQYLAFKMAELSVQ 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  + ++ A    E +S S  AA A+++       C   A  V  EA++ +GG+GY+
Sbjct: 292 IEQAQYMLYKAAMDKQEGRSYSISAAKAKMV-------CTDAAMQVSQEAVQMLGGNGYM 344

Query: 426 EERSIARHYRESPANSILLGS 446
           +E  + R  R++    I  G+
Sbjct: 345 KEYHVERMMRDAKITQIYEGT 365


>gi|327441462|dbj|BAK17827.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 23/280 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +   K  D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTYAVKDGDD-YILNGSKIFITNGGVADIYVVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +          ++E   P G    + + K+G RS+ T E+ F N       +LG+    
Sbjct: 172 TDPEAKNGTTAFIVEADYP-GFSVGKKEKKLGIRSSPTTEIIFDNCRVPKENVLGE--EG 228

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            G +  MK L   D     ++   V +A+     A+ YA+ R   G  +     +   +A
Sbjct: 229 QGFIIAMKTL---DGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGISFKLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I A+  L+++ A          + +A A+++A  T       A  V  EA++  G
Sbjct: 286 DMATEIEASRLLTYQAAWLESNDLPYGKASAMAKLLAGDT-------AMKVTTEAVQVFG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY ++  + R+ R++    I  G+     L +  ++ K
Sbjct: 339 GYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMITK 378


>gi|311103482|ref|YP_003976335.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758171|gb|ADP13620.1| acyl-CoA dehydrogenase, N-terminal domain protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 31/278 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+  ++  + + ++E   G+++A I  + +   D  Y L+G K W  +   +D  I+LA+
Sbjct: 112 PVLASAKNVCVAISEPNHGSNVAGIELKAEDQGDH-YVLNGSKLWITNGVNADYAIVLAR 170

Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                 +G++  FLV R   + SP    Y+ RL +K+  +++ T EL F    G  +   
Sbjct: 171 TFSASCDGKLSLFLVER---EQSP----YEARLVDKMVLKASGTAELRFD---GVRVPKE 220

Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N+       +K ++       L+ A+ +V   + +L  +I YA+ R   G  + +  +++
Sbjct: 221 NLLGAEGTALKTMLTGLNYGRLNIAMGAVGAAQAALDLSIEYAKTRRQFGRPIGEFQLVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + I D+ +   AA AL ++ A +        ++   AR+   I K +  + A  V   A+
Sbjct: 281 KHIVDMMVRTEAARALGYKAAVAV-------QKGLPARVECSIAKLYGAEAAHEVAKIAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              GG GY  E  + R +R++   +I  G+     L V
Sbjct: 334 SVHGGLGYSTEYPLERIFRDTSGGTIPEGTAEVQTLIV 371


>gi|170582748|ref|XP_001896268.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Brugia malayi]
 gi|158596553|gb|EDP34881.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Brugia malayi]
          Length = 611

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 31/270 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D  ++ +  +K SDG  Y L+G K W  +   +D F + A+ +         
Sbjct: 190 LTESGTGSDANSVQTHAEKSSDGRCYVLNGGKLWISNGSFADIFTVFARTQVKDKDGTSK 249

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R     S  G+     + K+G + + TVE+ F NT      LLG      G
Sbjct: 250 SKMSAFIVER-----SHGGITTSIPEKKMGIKGSKTVEVHFDNTKVPVDNLLG--AEGEG 302

Query: 308 PVEDMKILIYLDSAIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL      I +V    M+  + + I +   R   G  L +   ++  + D+ L 
Sbjct: 303 FKLAMNILNNGRFGIPAVCTGSMKFCIQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLR 362

Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A  +L + L+   D+     E EAA A+IMA    +  C         A++  GG GY
Sbjct: 363 HYATESLLYMLSGLMDKGTVDYELEAALAKIMASENAWIVCD-------RAIQLHGGMGY 415

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++E  + R  R+     I  G+ + + L V
Sbjct: 416 MKECGLERVMRDLRIFRIFEGANDVLRLFV 445


>gi|150007117|ref|YP_001301860.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503]
 gi|255015268|ref|ZP_05287394.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_7]
 gi|256840494|ref|ZP_05546002.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13]
 gi|298377542|ref|ZP_06987494.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19]
 gi|149935541|gb|ABR42238.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503]
 gi|256737766|gb|EEU51092.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13]
 gi|298265561|gb|EFI07222.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19]
          Length = 568

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 133/291 (45%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ ++  +     +DG + L+G K F+++  +D  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQSVMLKASYNEADGCWYLNGVKRFITNGDADIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK+G + + T EL F N    L GD  +  G ++   ++
Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVFKNAKAELCGDRKL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPV------MKRAIADIAL 364
             ++ A + +    V L+EA +         R   G  +I+ P       + RA AD + 
Sbjct: 287 ALMNGARLGIMAQAVGLSEAAYREAYAYALDRKQFGKSIIEFPAIAEIIALMRAKADASR 346

Query: 365 DIAAATALSFRLANSFDE--------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIA 413
            +   TA    +  + D+         + R E   Y+++     P+ K    + A     
Sbjct: 347 SMLYETARFVDVYKALDDISKERKLTPEERQEFKKYSKLADAFTPMGKGMTTEYANQNAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +A++  GGSG++++ +  R YR++   +I  G+    V+  +  +  GT L
Sbjct: 407 DAIQVHGGSGFMKDYACERIYRDARITNIYEGTTQLQVVAAIRHVTTGTYL 457


>gi|15613693|ref|NP_241996.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10173746|dbj|BAB04849.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 381

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 37/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252
            GLTE   G+D     ++     D  Y ++G K ++++      +++  V G+       
Sbjct: 123 FGLTEPNAGSDAGGTRTKAVLEGD-EYVINGEKCWITNAGYARTVIVTAVTGKDERGKPV 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +   +VP  +E     G       +K+G R++ T EL   +       LLGD      P 
Sbjct: 182 ISALIVPTGIE-----GFTISCNYDKMGVRASNTCELVLEDVRVPKENLLGD------PT 230

Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K  +Y LD   +S+  + V +A+A     + YA  R   G  +     ++  +AD+A
Sbjct: 231 KGFKQFLYTLDGGRISIGALAVGIAQAAFDRALAYANERKQFGQKISSFQAIQFKLADMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I  A  +  + A   D+ K  ++E AYA++ A  T       A     +A++  GG G
Sbjct: 291 MEIELARNMVLKAAWLKDQKKPFTKEGAYAKLYASET-------AMRTANQAIQIHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y++E  + R  R+  A  + +G G + +
Sbjct: 344 YMQEYEVERMLRD--AKLLEIGEGTSEI 369


>gi|146307714|ref|YP_001188179.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575915|gb|ABP85447.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 386

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 20/267 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+      +K+G RS+ T ++ F N      + +G    + G    M++L
Sbjct: 182 SLIMVPMKTPGISVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIG----AEGAGFMMQML 237

Query: 316 IYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + +  +      + G+   +   I Y ++RH  G  LID  V+   +A++  +I    A
Sbjct: 238 QFQEERLFGAANMIKGLEHCVDATIDYCKQRHTFGQPLIDNQVIHFRMAELQTEIECLRA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++    + + +  ++ A+ A++ A        ++   V    ++  GG G++ +  ++
Sbjct: 298 LVYQATEQYVKGRDVTKLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVS 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR+    SI  G+   M+  +  L+
Sbjct: 351 RAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|171185009|ref|YP_001793928.1| acyl-CoA dehydrogenase domain-containing protein [Thermoproteus
           neutrophilus V24Sta]
 gi|170934221|gb|ACB39482.1| acyl-CoA dehydrogenase domain protein [Thermoproteus neutrophilus
           V24Sta]
          Length = 405

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 38/282 (13%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGCF 256
           TE   G+D+A + ++ +++  G + ++G K F+SS  ++   ++LA+       GR    
Sbjct: 135 TEPCCGSDVAGVRTRARRVG-GRWVINGRKAFISSSDVAHYILVLARTSDPPDAGRRHVG 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMK 313
           L   ++E  +P G+  ++  +K+G R N   E+         L D+ V    +   E M 
Sbjct: 194 LSMFVVERDAP-GVKVEQCYSKLGLRGNHACEIS--------LTDVEVPEESLVGREGMG 244

Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +++        A  +V   + +  +A  YA RR   G  +     ++ ++ ++   
Sbjct: 245 FYYAMEAFNRSRIGIAAQAVGMAQAAFEKAFDYAHRREAFGVKIASFQAIQFSLVEMLAK 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L++  A   DE +    E  +   +A + KY+  + A  VI++A++  GG+G +
Sbjct: 305 IMTARLLTYMAAKLADEGR---REFVF---VASLAKYYATEAAEEVISDAVDVFGGAGVV 358

Query: 426 EERSIARHYRESPANSILLGSGNAMVL----DVLNLL-EKGT 462
            E  + R YR+     I  G+ N   L     ++ LL E+GT
Sbjct: 359 RETGLERLYRDVKITQIYEGANNVQKLAAYRQLVRLLQERGT 400


>gi|312112657|ref|YP_003990973.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311217758|gb|ADP76362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 54/299 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223
           T    K + PK+ S EY                LG   LTE   G+D  ++ ++  +  D
Sbjct: 102 TEEQKKKYVPKLASGEY----------------LGAFCLTEPGAGSDAKSLKTKAVRQGD 145

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLK 276
             Y L+G K F+++   +D +I+ A+ +        +  F+V    E G+P G    + +
Sbjct: 146 -YYILNGSKIFITNGGEADTYIVFARTDPNEKGSRGISAFIV----EKGTP-GFIIGKDE 199

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332
            K+G   + TV++ F N       LLG+        +  KI +  LDS  + ++   + +
Sbjct: 200 KKMGLHGSRTVQIMFENAKVPAENLLGEEG------QGFKIAMANLDSGRIGIAAQSLGI 253

Query: 333 AEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AEA       YA+ R   G  + +Q  +   +AD+A  + AA  L +  A    +     
Sbjct: 254 AEAALEHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +EAA A++ A  T      M  A+  EA++  GG+GY ++  + R +R++    I  G+
Sbjct: 314 KEAAMAKLFASRT-----AMENAI--EAVQIFGGNGYTKDYPVERLFRDAKICEIYEGT 365


>gi|144899157|emb|CAM76021.1| isovaleryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 387

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 32/279 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKKGD-RYILNGTKMWITNGPDADTLVVYAKTDVNAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G    +  +K+G R + T EL F        N  G      NV  G    
Sbjct: 187 TTFIIEKDFKGFSVAQKLDKLGMRGSNTGELVFQDCEVPEENVLG------NVGKGVNVL 240

Query: 312 MKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           M  L Y + A+++   +  MR  +   + Y   R   G  +    +M+  IAD+   + A
Sbjct: 241 MSGLDY-ERAVLAGGPLGIMRACMDVVVPYIHERTQFGQAIGTFQLMQGKIADMYTTMNA 299

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A ++ +A +    ++  ++AA   +       W       +  EA++ +GG+GYI E 
Sbjct: 300 CRAYAYAVAKACTRGETTRKDAAGVILYTAEKATW-------MALEAIQTLGGNGYINEY 352

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           S  R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 353 STGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 385


>gi|254784718|ref|YP_003072146.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae
           T7901]
 gi|237684433|gb|ACR11697.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae
           T7901]
          Length = 591

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 115/291 (39%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML-------AQV 249
           + LTE   GTD+  I ++ + ++D  Y ++G K F++     +++  I L       A  
Sbjct: 163 MDLTEPHAGTDLGLIRTRAEPLADDSYAVTGTKIFITWGEHQLAENIIHLVLAKLPDAPA 222

Query: 250 EGR-VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             R +  FLVP+ + D     G  N      L+ K+G +++ T  + F    G+L+G+ +
Sbjct: 223 GSRGISMFLVPKYIPDAQGEPGERNRFSCGGLEKKMGIKASPTCVMNFDGARGWLVGEPH 282

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILID 351
                +  M     L   I  V     S   A+ YAR R                  L+ 
Sbjct: 283 KGLQAMFTMMNYERLVVGIQGVGAAEASYQNAVSYARERLQGRSPVGAHSPEKEADNLLV 342

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCC 405
            P ++R +  +     A  A    ++   D AK       +++  A   ++ P+ K +  
Sbjct: 343 HPDVRRMLLTMRALNEAGRAFYIYVSQWLDIAKFSDDQQRKTQAEALVALLTPVAKGFMT 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A  V     +  GG G+I E    +  R++    I  G+     +D++ 
Sbjct: 403 DRAFEVAVLGQQVYGGHGFIREWGQEQLVRDTRITQIYEGTNGVQAMDLVG 453


>gi|228909054|ref|ZP_04072883.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228850562|gb|EEM95387.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 397

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   V C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   I D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|126458792|ref|YP_001055070.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126248513|gb|ABO07604.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 376

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 60/334 (17%)

Query: 153 SPSVTS-----ASMVA----LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           SP V +     +SM+A     M  PR  ++  PK  S E             +     L+
Sbjct: 76  SPGVATIMEIQSSMIAENIYAMGNPRQREELLPKFASGE-------------LICAFALS 122

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR---VGCF 256
           E   G+D  AI ++  ++  G + +SG K W  S   +D +++ A+    E R   +  F
Sbjct: 123 EPCCGSDAGAIETRAVRVG-GEWRISGVKMWITSGLYADYYLVFARTGPKEARHKAITAF 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
           LV R        G C +    ++ G R   T E++F+        ++G +N      E  
Sbjct: 182 LVKR--------GSCVEATPIEVMGVRGTGTAEVKFNECPANDDDIVGKIN------EGW 227

Query: 313 KILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            ++++ L+    ++SG+ V +A     EA+ +AR R + G  LI+    +  +A++   I
Sbjct: 228 AVVVHALNVGRAAISGVAVGIARGAFEEALSWARGRRLFGKTLIEFQNTQFELAEMYAAI 287

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L++  A  +D  KS    A     MA + K    ++A  V   A++  GG GY +
Sbjct: 288 ETARTLTYYAAYLYD-VKSPDFVA-----MAHVAKLQTARIAVDVARRAVQLEGGYGYSK 341

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E      YR++    I  G+   M   +  LLEK
Sbjct: 342 ESKAEMFYRDAKILEIGEGTNEVMKYVLFKLLEK 375


>gi|264677855|ref|YP_003277761.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208367|gb|ACY32465.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 392

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 31/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
           +G++E   G+D++ I S  +K  D  Y +SG K W  +S  +D   ML       V    
Sbjct: 123 IGVSEPGAGSDVSGIKSHARKDGDD-YIISGQKMWITNSIQADWMCMLVNTGDGPVHKNK 181

Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              +VP  L +G    L       Q+L+ KIG  S+ T  L F        +L+G     
Sbjct: 182 SLIMVP--LREGPRGKLTRGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236

Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G +  M+     +    S SG   M   + + I +A++R + G  LIDQ  ++  +A++
Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL++R A  +   +   + A+ A++ +        ++   V    ++  GG 
Sbjct: 296 QTEVEALRALTYRAAQMYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G+  +  ++R YR+    SI  G+   M+
Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377


>gi|168052474|ref|XP_001778675.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669993|gb|EDQ56570.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 388

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 13/252 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K+  G Y L+G+K W  + P ++  I+  + +   G   +
Sbjct: 129 LAMSEPNSGSDVVSMKCRAGKVEGG-YVLNGNKMWCTNGPKANTLIVYVKTDVHAGAHGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F N F      L      V  M   + L
Sbjct: 188 TAFIIEKGMEGFSTAQKLDKLGMRGSDTCELVFENCFVSNDQILGQEGKGVYVMMSGLDL 247

Query: 319 DSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT-ALSF 374
           +  +++      M+  L   + Y R R   G  + +  +M+  +AD+   + A++ A  +
Sbjct: 248 ERLVLAAGPLGLMQACLDVVLPYVRERQQFGKPIGEFQLMQGKLADMYTKMQASSRAFVY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A   D   +  ++ A   + +        + A  +  +A++C+GG+GY+ E    R  
Sbjct: 308 SVARMCDAGHADRKDCASVILFSA-------ENATQMALQAIQCLGGNGYVNEYPTGRLL 360

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 361 RDAKLYEIGAGT 372


>gi|209963739|ref|YP_002296654.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209957205|gb|ACI97841.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 390

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 133/297 (44%), Gaps = 37/297 (12%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P   + + PK+ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 104 NQIRLNGSPEQKRRYLPKLISGEH--------------VGALAMSETGAGSDVVSMKLRA 149

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLK 276
           ++  D  + L+G K W  + P +D  ++ A+ +   G   +   L+E G     C Q+L 
Sbjct: 150 ERRGD-RFVLNGSKMWITNGPDADVLVVYAKTDPTAGPKGITAFLIEKGFKGFSCAQKL- 207

Query: 277 NKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +K+G R + T EL F        N  G + G + V    ++  + L+    +   +  M+
Sbjct: 208 DKLGMRGSHTGELVFQDCEVPEENVLGRMNGGVRVLMSGLDYERALL----SAGPIGIMQ 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + Y  +R   G  + +   ++  +AD+ + + +  A ++ +  + D  +   ++
Sbjct: 264 AALDVVVPYVHQREQFGQPIGEFQFIQGKLADMYVALNSTRAYAYAVGKAADLGRITRKD 323

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           AA   +MA        + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 324 AAGVILMA-------AENATKVALDAIQVLGGNGYINEFPTGRLLRDAKLYEIGAGT 373


>gi|167568133|ref|ZP_02361049.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
 gi|167568238|ref|ZP_02361112.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 378

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 29/290 (10%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP I     D   +  + K + A  +G   +TE   G+D+  + +   +  D  Y L+G 
Sbjct: 96  APYILHYGSDALKEHYLPKLASAEMIGAIAMTEPGAGSDLQGVRTAAVRDGDH-YVLNGS 154

Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +D  I++A+     G       + D    G    +   K+G ++  T EL 
Sbjct: 155 KIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTEMAGFSKGKRLKKVGMKAQDTSELF 214

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F       G LLG+ N   G V  M+ L +  L  AI +++    +L+  + Y R R   
Sbjct: 215 FDGVRVPAGNLLGEEN--RGFVYLMQELPWERLQIAISAIASAEAALSWTLDYTRDRRAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           G  +ID    + A+A++  +I          +  +LA   D A             A + 
Sbjct: 273 GKAVIDFQTSRHALAELKSEIQVGRVFVDKCIELQLAGKLDAA------------TASMA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           KYW  ++   VI   ++  GG GY+ E  IAR + +S    I  G+   M
Sbjct: 321 KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 370


>gi|116695137|ref|YP_840713.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529636|emb|CAJ95983.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 377

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++  + +D  + L+G K F+++   +   ++ A  E   G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRA-RFTDNGWVLNGSKQFVTNGQRAGVAVVFASTEPERGKKGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP      +P G      + K+G R++ T  +   +       LLG+    L ++   
Sbjct: 184 FLVP----TNTP-GFIVHAPEKKLGIRASDTCAITLEDCTVPHDALLGEPGEGLRIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ A
Sbjct: 239 LEGGRIGI----AAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  R A    E      EA+ A++ A        ++A  V ++A++  GG GY+E+ 
Sbjct: 295 ARLLVHRAARMRSEGVPCLSEASQAKLYAS-------ELAERVCSKALQIHGGYGYLEDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 PVERHYRDARITQIYEGT 365


>gi|78061564|ref|YP_371472.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77969449|gb|ABB10828.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 377

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A+ I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|108804542|ref|YP_644479.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
 gi|108765785|gb|ABG04667.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 47/270 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQV----EGR 252
            GLTE+  GTD AA T    ++ DG + ++G K ++++  +D      ++A+     +GR
Sbjct: 124 FGLTEEEAGTD-AAGTRTTARLEDGRWVINGSKKWITNSGTDITAGVTIIARTGEREDGR 182

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   +VP+    G   G  Y+    K G R++    L F         D  V   P E
Sbjct: 183 PELTAIIVPQDT-PGYTRGPGYE----KTGWRASDQRPLYFE--------DCRV---PAE 226

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           +          + L  LD   ++V  + V LA     EA+  A+ R   G  + +   ++
Sbjct: 227 NTLGERGRGFRQFLATLDGGRVAVGALSVGLAQACLDEALRRAKERRQFGRAIGEFQAIQ 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A++I  A  +  + A   D  +  S EA+ A++ A  T       A     +A+
Sbjct: 287 FKLADMAMEIELARNMVLKAAWLKDMGRPFSREASMAKVFASET-------AKRAADQAV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG G++E  ++AR++R+   N I  G+
Sbjct: 340 QIWGGEGFMETNAVARYWRQVKINEIGEGT 369


>gi|229192913|ref|ZP_04319870.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228590523|gb|EEK48385.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 395

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 28/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   V C L
Sbjct: 122 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---------P 308
           VP+        G+    +++ +G ++    E+EF+N  G  L ++    G          
Sbjct: 181 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNV-GIPLENIIGRPGFAFTYLAPYA 234

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A
Sbjct: 235 LEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEA 290

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  +  
Sbjct: 291 SILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCNDNY 344

Query: 429 SIARHYRESPANSILLGS 446
           SI+R +R+S    I+ GS
Sbjct: 345 SISRCFRDSKTMEIVEGS 362


>gi|138895165|ref|YP_001125618.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266678|gb|ABO66873.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 419

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 55/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
             +TE   G+D   I     K  D  + L+G K F++      F+M+  +          
Sbjct: 153 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQATN 211

Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           GR G  CF+V R           +   +P  L ++ ++       N   EL +    G+ 
Sbjct: 212 GREGVTCFIVDRDMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHY----GYK 264

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           LG              L ++  A   V    V  AE     AI YA+ R   G  + ++ 
Sbjct: 265 LG--------------LEWIGYARWVVGARAVGTAERLLQMAIDYAKERVTFGKPIAERQ 310

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD A++I AA  L    A + DE +         R +A + K +   M   V+ 
Sbjct: 311 AIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------RHLASMAKLFGANMGNRVVD 363

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             M+  GG GY +E  I R YRE+    I  G+     L +   L KG
Sbjct: 364 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 411


>gi|313226306|emb|CBY21450.1| unnamed protein product [Oikopleura dioica]
          Length = 413

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 31/271 (11%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251
           L +TE   G+D+ ++ T+  Q      Y L+G+K W  + P+ D  I  A+ +       
Sbjct: 148 LSMTEPTAGSDVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGD 207

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTG 307
            +  F+V     D    G     +  K+G R + T +L F N        LLG+   +  
Sbjct: 208 SITAFIV-----DTDAEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFV 262

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  + I   L +A M V  M+  + ++  YA  R   G  +    +M+  +A++   ++
Sbjct: 263 LMRGLNIERLLGAA-MPVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLS 321

Query: 368 AATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A  A ++ +  S D   EA S  E A+    ++      C K+A     E ++ +GG+GY
Sbjct: 322 ACRAYTYSMLKSADQDPEAMSNHECASLIMFVSDA----CTKVA----LEGIQILGGNGY 373

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + +  + R+ R+  A  + +G+G   V  V+
Sbjct: 374 VNDYPVNRYMRD--AKLMEIGAGTTEVRKVI 402


>gi|77735711|ref|NP_001029554.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|122142996|sp|Q3SZI8|IVD_BOVIN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|74268107|gb|AAI02837.1| Isovaleryl Coenzyme A dehydrogenase [Bos taurus]
 gi|296483314|gb|DAA25429.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 426

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 49/296 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 150 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YVLNG 194

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  ++ A+ +       VP        ++E G P G    +  +K+G R
Sbjct: 195 NKFWITNGPDADVLVVYAKTD----VTAVPASRGITAFIVEKGMP-GFSTSKKLDKLGMR 249

Query: 283 SNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            + T EL F       +N  G L   + V    + D++ L+ L    + +  M+  L   
Sbjct: 250 GSNTCELVFEDCEVPAANILGHLGKGVYVLMSGL-DLERLV-LAGGPLGI--MQAVLDHT 305

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   +
Sbjct: 306 IPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTTKDCAGVIL 365

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  +  + A  V  + ++C+GG+GYI +  + R  R++    I  G+G + V
Sbjct: 366 -------YSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412


>gi|330823115|ref|YP_004386418.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308487|gb|AEB82902.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 416

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 31/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250
           L+E   G+D+A+I+ + + + D  + L+G+K W   +  +D   + A+           E
Sbjct: 131 LSEPDTGSDLASISCRAELVGDE-WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWE 189

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CFL+ +   +  P G+  Q +  KIG     T EL  ++     +   N+   P +
Sbjct: 190 G-ISCFLIEKKRGE-FPPGMVGQPIP-KIGYFGWKTFELALND---LRVPRENLIGAPGQ 243

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I+   L++A    +   + LA+     AI YAR R   G  + +   ++  IA +A 
Sbjct: 244 AFLIMAKGLETARAHTAARAIGLAQGALEDAIAYARERKQFGMPIAEYQAIRFKIATMAT 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L   + ++ D  +    EA+  ++ A        +MA  V +EA++  GG+GY
Sbjct: 304 EVEAARQLLHYVCSAIDSGRRCDTEASMVKLFA-------TEMAERVTSEALQIFGGAGY 356

Query: 425 IEERSIARHYRESPANSILLGS 446
            +  ++ RH+R++    I  G+
Sbjct: 357 TKLFAVERHWRDARLTKIFEGT 378


>gi|239504114|ref|ZP_04663424.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB900]
          Length = 387

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 32/267 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N         K
Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAG------FK 237

Query: 314 ILIY---LDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++    ++   + V     +LA   EA+ +A++R   G  LID  V++  + D+A  + 
Sbjct: 238 VIMNNFNMERFFLGVVAYGYALACYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLT 297

Query: 368 AATALSFRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AL    A    + K +  E     +  + +A  T  +C          A++ +GG G
Sbjct: 298 STRALLEETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++      R YRE   N I  G+   M
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIM 377


>gi|295837705|ref|ZP_06824638.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197695923|gb|EDY42856.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 608

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  + +DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKFEFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316

Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378
           A+ YA+ R V G  L +              P ++R++           AL    A   +
Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375

Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           S    ++  E+AA       ++ PI K +  + +   +A++++  GGSGY++E  + ++ 
Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435

Query: 435 RESPANSILLGS 446
           R++  +++  G+
Sbjct: 436 RDAKIDTLYEGT 447


>gi|126737840|ref|ZP_01753570.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126721233|gb|EBA17937.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 406

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A++ ++ +K ++G Y L+G K W  ++P++D F++ A+ +   G++  
Sbjct: 148 FGLTEPDAGSDPASMKTRAEKTANG-YKLTGSKMWISNAPIADVFVVWAKSDEHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++KNK   R++ T E+           LL  +    GP    
Sbjct: 207 FVLEKGMQ-----GLSAPKIKNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AEA  H AR+    R   G  L +  + +  +A++  +I 
Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHSARQYGLDRQQFGRPLANTQLFQLKLANMQTEIT 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA +  E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 316 LGLQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARNARDMHGGNGISLE 368

Query: 428 RSIARH 433
            ++ RH
Sbjct: 369 FNVIRH 374


>gi|83717455|ref|YP_440124.1| AMP-binding domain-containing protein [Burkholderia thailandensis
            E264]
 gi|83651280|gb|ABC35344.1| AMP-binding domain protein [Burkholderia thailandensis E264]
          Length = 1323

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+++ AITS  Q++    + +SG K W  SS  +    + A+     G  +V  
Sbjct: 791  LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 848

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R     T+ L+ +  +    LG         +       
Sbjct: 849  AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 907

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ I D+   I   +AL  +L
Sbjct: 908  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 966

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  ++  E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 967  AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 1020

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 1021 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1053


>gi|120555660|ref|YP_960011.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325509|gb|ABM19824.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 596

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 124/314 (39%), Gaps = 38/314 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   GTD+  I ++ +   DG + ++G K F++    D       ++LA++    +
Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNDDGSFSITGTKIFITWGEHDMAENIIHLVLAKLPDAPK 223

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G  G   FLVP+ +  +DGS    N      ++ K+G +++AT  + F    G+L+G+ N
Sbjct: 224 GPKGISLFLVPKFMVNDDGSLGERNQFSCGSIEKKMGIKASATCVMNFDGAKGWLVGEEN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350
                +  M     L   I  +     SL  A  YA  R               +  IL+
Sbjct: 284 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYANERIQSRAPTGAQQPEKAADPILV 343

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404
             P ++R +  +   +    A S  +A   D +K       R        ++ P+ K + 
Sbjct: 344 -HPDVRRMLLTMKSYVEGGRAFSTYVAQWLDISKYSDNDEQRKHAEGMVALLTPVAKAFL 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                       +  GG G+I E    +  R+     I  G+     +D++     G+  
Sbjct: 403 TDRGLDTTIIGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQAMDLMGRKVVGSQ- 461

Query: 465 FEQLFSTLEQDLGS 478
             +L+    QD+ +
Sbjct: 462 -GKLYELFAQDVAA 474


>gi|195127930|ref|XP_002008420.1| GI11829 [Drosophila mojavensis]
 gi|193920029|gb|EDW18896.1| GI11829 [Drosophila mojavensis]
          Length = 414

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  + F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + +    V LA+      I Y   R   G  + +   M+  IA I
Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIFNFQSMQHQIATI 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  L++  A   +      +EAA A       K++  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCIDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|169630123|ref|YP_001703772.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242090|emb|CAM63118.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 384

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGIKTRAVKDGDH-YILNGAKTFITNGINADLVIVVAQTDPEKGALGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             ++ +    G    R  +K+G  +  T EL F++               F +L+ +L  
Sbjct: 189 SLIVVERGMEGFERGRKLDKVGLDAQDTAELSFTDVRVPAANLLGEEGQGFIYLMKNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E M I      A+M+ + M   L E I Y   R   G  +      +  +A++A 
Sbjct: 247 ---PQERMSI------AVMAAAAMESVLEETIAYTTERKAFGKPIKSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D      +     +  ++ +   E+AA A       K++  +    +I   ++  GG G+
Sbjct: 298 DATVIRVMVDEFISLLNKEELSVEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGF 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYMDSRIQTIYGGTTEIM 376


>gi|302345814|ref|YP_003814167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149404|gb|ADK95666.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 558

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 152 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 211

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + +++K+G   + T EL + N    L G  NV  G ++   ++
Sbjct: 212 RGLSMFIYDKRNGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--NVRMGLIK--YVM 267

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L      E + YA+ R   G  +++ P +   ++ +   + A  
Sbjct: 268 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKDRAQFGKKIVNFPAVYDMLSRMKAKLDAGR 327

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ A   D  K+              R E   Y R+     P+ K    + A     
Sbjct: 328 SLLYQTARYVDIYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 387

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +++   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L
Sbjct: 388 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL 438


>gi|262281607|ref|ZP_06059385.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262256983|gb|EEY75723.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 407

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257
           L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   
Sbjct: 147 LAITEPSGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKSGAEG 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   
Sbjct: 206 ISMLLIDAQSEGITKTPLK-KMGWWASDTAHLHFDQVKVPASNLLGKENAGFKVIMNNFN 264

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL  
Sbjct: 265 MERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLE 324

Query: 375 RLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             A    + K +  E     +  + +A  T  +C          A++ +GG G++     
Sbjct: 325 ETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 377

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE   N I  G+   M
Sbjct: 378 ERIYREVKVNMIGGGAEEIM 397


>gi|195020760|ref|XP_001985263.1| GH16965 [Drosophila grimshawi]
 gi|193898745|gb|EDV97611.1| GH16965 [Drosophila grimshawi]
          Length = 414

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y L+G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVLNGTKMWISNSDIAGVFLVFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  + F N          TFG        + G
Sbjct: 212 ITTFIVDRDTPGLIVNKPEDKLGIRASGTCMVTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + +    V LA+      I Y   R   G  + +   M+  IA I
Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATI 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  L++  A   +      +EAA A       K++  ++A     + ++ +GG 
Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCVDWMGGV 372

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|206972823|ref|ZP_03233745.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|229182030|ref|ZP_04309326.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|206731707|gb|EDZ48907.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228601445|gb|EEK58970.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 397

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   V C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   I D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|227501345|ref|ZP_03931394.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227216479|gb|EEI81888.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 378

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 36/277 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
             LTE   GTD     + GQK     DG  Y L+G K F+++   +D +++ A  +   G
Sbjct: 122 FALTEPDAGTD-----ASGQKTVAKLDGDHYVLNGTKIFITNAGYADTYVVFAMTDKEQG 176

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312
              +   + +    G  +   ++K+G + ++T+EL F         D  V    +  E+ 
Sbjct: 177 TRGISAFIVEKGMEGFDFGTTEDKMGIKGSSTMELIFR--------DCKVPKENLLGEEG 228

Query: 313 KILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K   Y    LD   + ++   + +AE     AI Y + R+  G  L      +  +A++A
Sbjct: 229 KGFKYAMQTLDGGRIGIAAQALGIAEGALDKAIKYVKERNQFGRPLAKFQNTQFKLAEMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +DI +A  L ++ A   D  +S +       + A   K    ++A  V  +A++  GG G
Sbjct: 289 IDIESARHLVYKAAWLKDNKESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           YI E  + R  R++    I  G+   M++ V   L K
Sbjct: 342 YIREYEVERMMRDAKITEIYEGTSEVMLMVVSGALLK 378


>gi|225561551|gb|EEH09831.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 429

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y ++G K W  +S  +  FI+ A 
Sbjct: 158 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTPSG-YKINGSKMWITNSIEAGFFIVFAN 216

Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++   G   +   ++E G+P G    + + K+G R+++T  L F +     +   N+   
Sbjct: 217 LDPSKGYKGITAFMVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 272

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIA 360
             +  K  I  L+   + ++     LA       A +    R   G ++ +   M+  +A
Sbjct: 273 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVA 332

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +IAAA AL +  A   +  +   ++AA A++ A        ++A  V   A+E +G
Sbjct: 333 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKLYA-------SQVAGRVAGSAVEWMG 385

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 386 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 425


>gi|62511251|gb|AAX84220.1| acyl-CoA dehydrogenase [Bacillus thuringiensis]
          Length = 397

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   V C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   I D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|149378151|ref|ZP_01895869.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357555|gb|EDM46059.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 389

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 26/242 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ +K+ DG Y +SG K W  +SP++D  ++ A++EG++  F++
Sbjct: 134 FGLTEPNHGSDPGNMETRAKKV-DGGYLVSGSKTWITNSPIADVCVVWAKLEGKITGFVI 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R   +G+  GL   +++ K   R++ T  +     F      L+V    GP        
Sbjct: 193 ER---EGA-KGLDTPKIEGKFSLRASETGSIFMDEVFVPDENKLDVEGLKGPFS------ 242

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE     A++Y   R   G  L    ++++ +AD+  +I     
Sbjct: 243 CLNKARFGISWGSLGAAEFCWHAALNYTLERKQFGKPLAANQLIQKKLADMQTEITLGLQ 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + +L    D          Y+     + K   C  A  +   A +  GG+G  +E  + 
Sbjct: 303 GALQLGRMIDAGN-------YSTDAISMLKRNNCGKALDIARVARDMHGGNGIADEYHVI 355

Query: 432 RH 433
           RH
Sbjct: 356 RH 357


>gi|83943210|ref|ZP_00955670.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83846218|gb|EAP84095.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 380

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +        +   
Sbjct: 124 LTEPGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDDGAAGVSTV 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
            +EDG+  GL +  L++K+G RS  T +++F         D N+  G +  E+ K   Y 
Sbjct: 183 YVEDGTA-GLSFGGLEDKMGWRSQPTSQVQFD--------DCNIPAGNLVGEEGKGFKYA 233

Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+ A  S+   + +L   + Y   R   G  +     ++  +A++ +++ AA
Sbjct: 234 MMGLDGGRLNIAACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D        A  A     + K +  +    V+ + ++  GG GY+ +  
Sbjct: 294 RVFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I +  R+   + IL G+   M
Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368


>gi|83954345|ref|ZP_00963065.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83841382|gb|EAP80552.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 380

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +        +   
Sbjct: 124 LTEPGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDDGAAGVSTV 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317
            +EDG+  GL +  L++K+G RS  T +++F         D N+  G +  E+ K   Y 
Sbjct: 183 YVEDGTA-GLSFGGLEDKMGWRSQPTSQVQFD--------DCNIPAGNLVGEEGKGFKYA 233

Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+ A  S+   + +L   + Y   R   G  +     ++  +A++ +++ AA
Sbjct: 234 MMGLDGGRLNIAACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D        A  A     + K +  +    V+ + ++  GG GY+ +  
Sbjct: 294 RVFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I +  R+   + IL G+   M
Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368


>gi|307294165|ref|ZP_07574009.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880316|gb|EFN11533.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 579

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 51/342 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG+ M  +  +  + A  T  +V +   P+I  R +                + L+E + 
Sbjct: 119 AGYPMLTAANARLIAAFGTPAQVDRFARPQIEGRWFGT--------------MCLSEPQA 164

Query: 208 GTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV--------E 250
           G+ +  I ++    G+    G Y LSG+K ++S+   +       ++LA++        E
Sbjct: 165 GSSLGDIRTRAVADGEDELGGRYRLSGNKMWISAGDQNVSENIVHLVLAKIAQQDGGLPE 224

Query: 251 GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVS 305
           G  G   F+VP++L DG+ N L    L +K+G R  A   L F   +   G+ +G     
Sbjct: 225 GSKGISLFIVPKILPDGTRNDLAVAGLNHKMGFRGTANCLLNFGEGAGAVGWRVGGEGQG 284

Query: 306 TGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPV 354
                  + + +I + + +A ++  G R SL  A    + R V  G+       + + P 
Sbjct: 285 LAQMFMMMNEARISVGMGAAALAYRGYRQSLRYAQERLQGRAV--GVRNGAPIPIFNHPD 342

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++R +         A AL    A   D+    +E      ++ P+ K W  +        
Sbjct: 343 VRRMLLQQKAYAEGALALCLYCARLVDQGGEDAE--TLLALLTPVAKSWPSEFGLIANDL 400

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A++  GG GY  +  + + +R++  N I  G+     +D+L 
Sbjct: 401 AIQVHGGYGYTRDFDVEQLWRDNRLNPIHEGTTGIQAIDLLG 442


>gi|217972707|ref|YP_002357458.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217497842|gb|ACK46035.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 389

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  + L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMNSCMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|115655541|ref|XP_796528.2| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
 gi|115969289|ref|XP_001195179.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
          Length = 461

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 129/271 (47%), Gaps = 35/271 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEG 251
           L ++E   G+D+ ++  + +K   G Y L+G+K+++++   DA ++L        A+ + 
Sbjct: 200 LAMSESGSGSDVLSMRLKAEK-KGGYYVLNGNKFWITNG-CDADVLLVYAKTDLSAEAKD 257

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304
            V  F++ + +E     G    +  +K+G R ++T EL F        N  G +   +N+
Sbjct: 258 GVTTFIIEKGME-----GFRSAQKVDKLGMRGSSTCELVFEDCKVPVENVLGGVNRGVNI 312

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +   +++I    A   +  M+  +  AI Y  +R   G  + +  +M+  +AD+  
Sbjct: 313 LMSGLNIERLII----ATAPIGIMQACMDVAIPYVHQRKQFGRPIGEFQLMQGKMADMYS 368

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A  +  + +A + D     ++ +A   + A        + A  V  +A++C+GG+GY
Sbjct: 369 RLNACRSYVYNVARAMDRGHITNKNSAAVALFA-------AENATQVALDAIQCLGGNGY 421

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           I +  + R  R++  N I  G+G + ++ ++
Sbjct: 422 IFDYPVGRFLRDAKLNEI--GAGTSEIIRLI 450


>gi|313225748|emb|CBY07222.1| unnamed protein product [Oikopleura dioica]
          Length = 643

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 27/268 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGR 252
           GL +TE   G+D+ ++ +   K  D  Y ++G+K W  + P++D  ++ A+      +GR
Sbjct: 382 GLAMTELNAGSDVMSMKTNAVKKGD-FYVINGNKFWITNGPVADHIVLYAKTNPSSNDGR 440

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
            +  F++     D    G   Q +  K+G R + T +L F N        L G+ + +  
Sbjct: 441 SITAFII-----DTKTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAV 495

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  + I   L +AI  V   + ++  A  YA  R      + +  +++  +AD+   ++
Sbjct: 496 LMSGLNIERILAAAI-PVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLS 554

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  +  + +A   D+ +  + + A   +       +C + A  +  +A++ +GG+G+I +
Sbjct: 555 ACRSYLYNVARHADKNEPTNHDCAGLVL-------YCAEKATQICLDAVQILGGNGFIND 607

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
               R+ R++    I  G+G + V  V+
Sbjct: 608 YPTGRYLRDAKLWEI--GAGTSEVRRVI 633


>gi|229070970|ref|ZP_04204197.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228712152|gb|EEL64100.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 397

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   V C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   I D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|198421914|ref|XP_002127780.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase [Ciona
           intestinalis]
          Length = 429

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 170 LAMSEPGSGSDVVSMKLKAEKKGD-YYVLNGSKFWITNGPDADTLVVYAKTDIAAEAQGI 228

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLV + +E     G    +  +K G R + T EL F N        L      V  + 
Sbjct: 229 TAFLVEKGME-----GFSTAQKLDKFGMRGSNTCELVFENCKVPAKNTLGAYNRGVYVLM 283

Query: 314 ILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + L+  ++S   +  M+  L  A  Y  +R   G  + +  +M+  +AD+   ++A  
Sbjct: 284 SGLDLERLVLSAGPIGLMQAVLDTAFPYMHQRKQFGQNIGEFQLMQGKMADMYTKLSACR 343

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D+    + + A   + A        + A  V  + ++C+GG+GYI +   
Sbjct: 344 AYMYGIARACDKGHFNNRDCAGVILYAA-------EAATQVALDGIQCLGGNGYINDYPT 396

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 397 GRFLRDAKLYEIGAGT 412


>gi|159185755|ref|NP_357135.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140889|gb|AAK89920.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 375

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 26/261 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254
           G  LTE + G+D + + ++ ++  D  Y L G K F++S  + D  I+ A  +   G   
Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-RYVLDGAKQFITSGKNGDVIIVFAVTDAAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R++ K+G  S+ T ++ F+     +  DL +        
Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSSDTCQIAFTEMA--VPVDLRLGEEGQGYR 231

Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  L+   + ++   V +A+A       YAR R   G  +I+   +   +AD+A  I 
Sbjct: 232 IALANLEGGRIGIAAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMATRIT 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L    A   +  +    EA+ A++ A        +MA  V ++A++  GG GY+ +
Sbjct: 292 AARQLVLHAAALKEAGEPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMAD 344

Query: 428 RSIARHYRESPANSILLGSGN 448
             + R YR+     I  G+ +
Sbjct: 345 YPVERIYRDVRICQIYEGTSD 365


>gi|146071671|ref|XP_001463171.1| acyl-coenzyme a dehydrogenase [Leishmania infantum]
 gi|134067254|emb|CAM65522.1| putative acyl-coenzyme a dehydrogenase [Leishmania infantum JPCM5]
          Length = 416

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 17/249 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  +++ + +LA+ EG    F+V  
Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILIYLD 319
              D    G+   + +  +G R + T  + F N        +  +  G    MK+  +  
Sbjct: 221 ---DADTPGVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTR 277

Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           SA+ +S  G+ R +  EA  YAR R   G  +     +   +A++A  + A   +++R  
Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +  +  A+ A++MA         +A      A++  GG+GY     + + YR+ 
Sbjct: 338 WETDQGRRNTYCASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390

Query: 438 PANSILLGS 446
              SI  G+
Sbjct: 391 KIFSIYEGT 399


>gi|159900084|ref|YP_001546331.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893123|gb|ABX06203.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 382

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 32/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
            GLTE   G+D  A +++   + DG  + ++G K ++++      ++   +  +      
Sbjct: 123 FGLTEPHAGSD--AGSTRTTAVRDGNEWVINGAKMWITNAAEAGHLIATAITNKDRGKRG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVED 311
           +   ++P+    G+P G+ +   ++K+G R + T  + F N    L   L     G V+ 
Sbjct: 181 ISAIIIPK----GTP-GVHFGSPEHKMGLRGSNTHAITFDNVRVPLENLLGAEGDGFVQF 235

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +K+L   D   +S+  M + L       A+ YAR R   G  +     +   +AD+  ++
Sbjct: 236 LKVL---DGGRISIGAMAIGLGVAAMEAAVSYARERQAFGHAIGSYQSISNMLADMDTEL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  R A   +  K  + EAA A++ A       C+        A++  GG GY  
Sbjct: 293 EAARLLILRAAWLKENGKPFTREAAIAKLYASEASERACR-------NAVQIFGGYGYSS 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           E  + R+YR++    + +G G + +L ++
Sbjct: 346 EYPVERYYRDT--RLLTIGEGTSEILRMV 372


>gi|86139734|ref|ZP_01058301.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85823625|gb|EAQ43833.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 378

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 28/279 (10%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           K+ S E       P+    +   +G++E   G+D+AA+ ++ ++  D  + ++G K W  
Sbjct: 100 KLGSDEIRKKYIGPLLAGEITASMGISEPNVGSDVAAVKTRARRDGDD-WVINGEKTWIT 158

Query: 236 SSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------V 287
           +   SD  I   A  EG      +  +L D   +G   + +K K+G  + +T       V
Sbjct: 159 NGRFSDFLICTCATDEG------LTHILVDRKEHGYETRDIK-KMGLNAQSTAQIFLDDV 211

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            +  +NT G +   L  +    E  ++ +    A+  +S  R +L E+I YA+ R+  G 
Sbjct: 212 RVPIANTIGEVGRGLQQTLVVFERARVHM----AMWGISLARRALEESIRYAQERNQHGK 267

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    ++   IA +A +I AA  L+ R A   D  +   +E A A       K++  ++
Sbjct: 268 QIAGHQLIADKIAVMATEIDAARLLTLRAAGMIDRGERCDKECAMA-------KWYGTEI 320

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A     +A++  GG+G   +  + R  RE+    I  G+
Sbjct: 321 AVNATRQAVQIHGGNGVTTDFIVERLAREAIIGPIPDGT 359


>gi|331003827|ref|ZP_08327319.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330412019|gb|EGG91416.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 384

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 43/279 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247
           P+ K        LTE   GTD     ++   + DG  Y L+G K F+++   +D ++++A
Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAQGAVTKA--VLDGDDYVLNGSKIFITNGKEADIYVVIA 170

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             E      GR        ++E  +P G  +   + K+G R ++T EL F+        D
Sbjct: 171 CTEIKVDAKGRQKKIFSAFIVEKDTP-GFGFGTKEKKMGIRGSSTYELIFT--------D 221

Query: 302 LNVSTGPVEDM--------KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGG 347
             V   P E+M         I ++ LD   + ++   + +AE      I Y + R   G 
Sbjct: 222 CRV---PKENMLGPAGKGFGIAMHTLDGGRIGIAAQALGIAEGALERTIAYVKERKQFGR 278

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      +  +A++A  + AA  L +R A +    K+ SEEAA A++ A        ++
Sbjct: 279 SIGAFQNTQFELANMATKVKAAQMLVYRAAMAKATQKTYSEEAAMAKLFA-------AEV 331

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A  V  +A++  GG GY  E  I R  R++    +  G+
Sbjct: 332 AMEVTTKAVQLHGGYGYTREYEIERMMRDAKITEVYEGT 370


>gi|299533488|ref|ZP_07046868.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718545|gb|EFI59522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 392

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 31/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253
           +G++E   G+D++ I S  +K  D  Y +SG K W  +S  +D   ML       V    
Sbjct: 123 IGVSEPGAGSDVSGIKSHARKDGDD-YVISGQKMWITNSIQADWMCMLVNTGDGPVHKNK 181

Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              +VP  L +G    L       Q+L+ KIG  S+ T  L F        +L+G     
Sbjct: 182 SLIMVP--LREGPRGKLTRGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236

Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G +  M+     +    S SG   M   + + I +A++R + G  LIDQ  ++  +A++
Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL++R A  +   +   + A+ A++ +        ++   V    ++  GG 
Sbjct: 296 QTEVEALRALTYRAAQIYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G+  +  ++R YR+    SI  G+   M+
Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377


>gi|99080573|ref|YP_612727.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99036853|gb|ABF63465.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 387

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRND-RFVLNGNKYWITNGPDADTLVVYAKTDPGAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +    G    +  +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       + E + Y   R   G  + +  +M+  IAD+   +  A 
Sbjct: 247 ERVVLAGIGTGIMASC-----MDEMMPYMAERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426
           A  + +A + D+     ++AA            CC  A  V      +A++  GG+GY+ 
Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370


>gi|154251231|ref|YP_001412055.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155181|gb|ABS62398.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 586

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 51/299 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+D+ A+ ++     DG Y +SG K +++    D       ++LA++     
Sbjct: 161 MNLTEPQAGSDLNALKTKAVPQGDGTYRISGTKIYITYGDHDMAENIVHLVLARLPDAPP 220

Query: 253 ----VGCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299
               +  FLVP+ L  EDGS     +  C   L+ K+G   + T  + +       G L+
Sbjct: 221 GTKGISLFLVPKFLVNEDGSLGARNDAWCIG-LEEKLGIHGSPTCVMSYGENGGAIGTLI 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVS---GGIL-- 349
           G  N     +  M     +++A + V    V++AEA +     YA+ R      G  L  
Sbjct: 280 GQENRGLACMFTM-----MNNARLLVGTQGVAIAEAAYQHALAYAKDRKQGRPLGSTLAP 334

Query: 350 ------IDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
                 I+ P ++R      ++ D +  I  ATA++   A++ D+   R E  A A ++ 
Sbjct: 335 GEMAPIIEHPDIRRMLLTMKSLTDASRAICYATAVAIDGAHAGDK---REEAQARADLLT 391

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           PI K +   +   V +  ++  GG G+IEE   A+  R++    I  G+     +D+++
Sbjct: 392 PIAKSFSTDIGVEVASIGVQIHGGMGFIEETGAAQFLRDARILPIYEGTNGIQAIDLVS 450


>gi|326381781|ref|ZP_08203474.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199207|gb|EGD56388.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 385

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLA------QVEG 251
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A      + + 
Sbjct: 124 IAMTEPGTGSDLAGMRTTAKLSEDGSHYVLNGAKTFITGGVNADRVIVCARTSPPSETDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L   L+ D    G    R  +K+G R++ T EL F+        D+ V   PVED
Sbjct: 184 RFGITL---LVVDTKAEGYAVGRKLDKLGLRTSDTAELSFT--------DVKV---PVED 229

Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     K   YL           A+ + +    ++  A  Y   R+V G  +      K 
Sbjct: 230 LLGEENKGFSYLGQHLPRERLSIALSAYAQGAAAVRFAKEYTLERNVFGKPVASFQNTKF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A     + A  A+  R   ++D  +  + +AA A++       +C + A  VI   ++
Sbjct: 290 ELAACKAKVDAMEAVVDRALEAYDRHELSAADAASAKL-------FCTEAAADVIDRCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 343 LHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375


>gi|259415585|ref|ZP_05739506.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp.
           TrichCH4B]
 gi|259348815|gb|EEW60577.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp.
           TrichCH4B]
          Length = 378

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 24/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPR 260
           LTE   G++ A + S   +  DG Y L G K F+S+     FI++ A+ +  VG   V  
Sbjct: 124 LTEPMAGSNPADMRSTATRDGDG-YWLKGSKCFISNAGEADFIVVYAKTDSAVGARGVSA 182

Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMK 313
            ++E G  +G+   + +  +G R      + F       N  G      +  TG    MK
Sbjct: 183 FVVEPGKTDGVEIGKREETMGLRGGHVFPISFDCRVPAENQLG------DEGTGFRTAMK 236

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L    ++ A  +    R +L  A+ YA+ R V G  +     ++  +AD A ++AAA A
Sbjct: 237 VLDNGRIEVAAQATGIARAALGAAVSYAKEREVGGRPIGSFQGLQWMLADSATELAAARA 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  + A      +  S ++A+A       K +  + A  +   A++  GG GY  +  + 
Sbjct: 297 LGLQAARKRGTGERYSTDSAFA-------KLYASEAAWRIADRALQIHGGYGYTRDFPLE 349

Query: 432 RHYRE 436
           R+ R+
Sbjct: 350 RYLRD 354


>gi|56461063|ref|YP_156344.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
 gi|56180073|gb|AAV82795.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
          Length = 594

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 132/343 (38%), Gaps = 53/343 (15%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +TS +++A+ +  +  +   + P++ S E+  T             + LTE   GT
Sbjct: 127 LYPGLTSGAIMAINSHGSDELKNHYLPRMVSGEWTGT-------------MCLTEPHAGT 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257
           D+  I S+     DG + LSG K F++     ++D  + L         A  +G +  F+
Sbjct: 174 DLGIIRSKAIPAQDGSFSLSGTKIFITGGEHDLTDNIVHLVLAKLPDAPAGTKG-ISLFV 232

Query: 258 VPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+ L D        N +    +++K+G  ++AT  + F     +L+G+ +     +  M
Sbjct: 233 VPKFLSDEQGNLTERNNVSCGSIEHKMGIHASATCVMNFDGAKAWLVGEPHRGLPAMFTM 292

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAI 359
                L   I  +     S   A+ YA+ R    G             IL+   V +R +
Sbjct: 293 MNYERLGVGIQGLGAAERSYQNALEYAKDRIQGRGAKATRNDQAEADSILVHGDV-RRML 351

Query: 360 ADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +        A S  +    D +K       R +  A   ++ P+ K +          
Sbjct: 352 LTMKSLTEGGRAFSTWVGQQLDRSKYAGDDQVRQKADAMVALLTPVAKAFLTDTGLESTI 411

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +  GG GY+ E    +  R++    I  G+     LD+L 
Sbjct: 412 HGQQVFGGHGYVREWGQEQLVRDTRIAQIYEGTNGIQALDLLG 454


>gi|319651583|ref|ZP_08005710.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317396650|gb|EFV77361.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 44/279 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
            GLTE   G+D     +   +  DG Y ++G+K F+++      + L  V G       +
Sbjct: 123 FGLTEPNAGSDAGGTRTTAVE-KDGEYIINGNKCFITNASYAKHLALTAVTGEKDGKKEI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312
              +VP   E     G        K+G        L  SNT   +L D+ V   P E + 
Sbjct: 182 SAIIVPTDAE-----GFTVIDNYEKMG--------LNASNTTELVLEDVRV---PTEHLL 225

Query: 313 --------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                   + LI LD   + +  M + +A+A     + YA+ R   G  L D   ++  +
Sbjct: 226 GKKGEGFKQFLITLDGGRIGIGAMALGIAQAAYDKALQYAKERKQFGRSLSDFQAIQFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ I  A  + ++ A   D+ +  ++EA+       + K +  ++   +  +A++  
Sbjct: 286 ADMAMKIELARNMVYKAAWLKDQGRPFAKEAS-------MCKLYASEICMEIADQAVQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+++  + R+ R+     I  G+     + +  L+
Sbjct: 339 GGYGYMKDYHVERYMRDGKLTEIGEGTSEVQRMVIARLI 377


>gi|167566833|ref|ZP_02359749.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
 gi|167573902|ref|ZP_02366776.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 383

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  +K  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTAARKDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R+R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR++   SI  G+   M+
Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370


>gi|120610662|ref|YP_970340.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589126|gb|ABM32566.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 399

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 23/265 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K + G Y L G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAHKTAGG-YKLKGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 174 SPIADVFVVWAKEVSESGAVGPIRGFVLEKGM-QGLTAPAIHGKVGLRASITGEIVMDDV 232

Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
           F   + + N     V+ +K     L+SA   ++   +  AE     A  Y   R   G  
Sbjct: 233 F---VPEENAFP-EVQGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRP 288

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +IA       RL    DE  +  E  +       I K   C  A
Sbjct: 289 LAANQLIQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCGKA 341

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 342 LDIARMARDMMGGNGISDEFGVARH 366


>gi|148547441|ref|YP_001267543.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511499|gb|ABQ78359.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 594

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ +   A  + LTE   GTD+  I ++ +  +DG   +SG K F++    D       +
Sbjct: 159 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 218

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP+ L +     G+ N +    +++K+G +++AT  + F  
Sbjct: 219 VLAKLPDAPAGAKGISLFLVPKFLVEADSRLGARNAVHCGSIEHKMGIKASATCVMNFDG 278

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352
             G+L+G+ N     +  M     L   I  +     S   A  YA  R  S      Q 
Sbjct: 279 AIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 338

Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
                 P++            R + +     A        +A   ++A  R        +
Sbjct: 339 HDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 399 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 458

Query: 456 N 456
            
Sbjct: 459 G 459


>gi|322495519|emb|CBZ30824.1| putative acyl-CoA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 411

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+ ++ +K     + ++G K ++++   +  F+++A  +   G     C
Sbjct: 144 LTEAGSGSDAFALNTKAEK-KGSKWVINGSKLYITNGGWAGIFLVMATADPSKGYKGITC 202

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V    +     G+   R +NK+G R+++T EL F N     + + NV     +  KI 
Sbjct: 203 FVV----DSSETPGVSVVRTENKLGIRASSTAELRFENV---EVSEENVIGEVGKGYKIA 255

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + +    V +A+      + Y  +R   G  + D   M+   A+ A+++ AA
Sbjct: 256 INILNEGRIGIGAQMVGIAQGSLDIVMPYLFQRKQFGKFIGDFQGMQMQYAECAMELHAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +  +      ++  ++AA A       KY+   +A    + A+E  GG G++++  
Sbjct: 316 RLMVYNASRKKQNNEAFIQDAAMA-------KYFASVVAEKTASRAVEWAGGVGFMKDFG 368

Query: 430 IARHYRESPANSILLGS 446
           + R YR++   +I  G+
Sbjct: 369 LERFYRDAKIGAIYEGT 385


>gi|307726730|ref|YP_003909943.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587255|gb|ADN60652.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 20/253 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y L+G K F+S+   +D  +  A  +   G      
Sbjct: 128 LTEPHAGSDTAALRATARRDGDH-YVLNGTKQFISNGSEADVGVAFAITDKAAGKRGAST 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
            + D    G    R++NK+G  +  T ++         +N  G          G + D +
Sbjct: 187 FIIDPKAPGYHVTRVENKLGQHTAHTAQISLEDYRVPAANLLGAEGDGYRTVMGGLCDGR 246

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I   +A ++    R +L  A+ YAR R   G  +I    +   +AD+A  +  A    
Sbjct: 247 IGIGFIAAGVA----RAALDAAVRYAREREAYGAPIIKLQGVAFDLADMAAQVEVALQYC 302

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A   D      +EA+       I K +  ++A  V ++A++  GG GY+ + ++ R+
Sbjct: 303 VHAARLRDTGADCIKEAS-------IAKMFASEIAEKVCSDALQIHGGYGYLTDFAVERY 355

Query: 434 YRESPANSILLGS 446
            R+     I  G+
Sbjct: 356 LRDVRICKIYEGT 368


>gi|284167566|ref|YP_003405844.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017221|gb|ADB63171.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 27/271 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---- 255
             L+E   G+D+ A+ +  +K  D      G  W  +  ++D   + A+ +   G     
Sbjct: 123 FALSEAGAGSDVPAMETTAEKAGDEYVVNGGKLWISNGSVADTVTLFAKTDPDAGSKGIS 182

Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F+V R  ED   +G   +  + K+G++   T EL F +       LLG+     G V+ 
Sbjct: 183 SFIV-RPEED---DGFIVEGTEEKLGDKGCPTAELRFDDLRIPENRLLGE--EGEGFVQA 236

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +K L    +  A  SV   + +L EA  Y++ R      + D   ++  +AD+     AA
Sbjct: 237 LKTLNGGRITIAARSVGIAQAALDEARKYSQDREQFDRPISDFQAIQHKLADMDTKTRAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A+     ++  +EAA A++       +  +++  +  E ++  GG GY ++ +
Sbjct: 297 RLLMHDAADRKMRGENFVKEAAQAKL-------YASEVSREIANEGIQIHGGYGYTKDFA 349

Query: 430 IARHYRESPANSILLGSG----NAMVLDVLN 456
             R YR++  N I  G+     N +  ++LN
Sbjct: 350 AQRFYRDAKLNEIYEGTSEVLRNTIARELLN 380


>gi|300778917|ref|ZP_07088775.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300504427|gb|EFK35567.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 40/288 (13%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           K  S E       P+    V     L+E   G+D  +  +  +   D  Y L+G K W  
Sbjct: 100 KFASEEQKVKYLTPLASGQVIGAFALSEPEAGSDATSQKTTAEDKGD-YYLLNGIKNWIT 158

Query: 236 SSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +   +  +I++AQ +       +  F+V R  E     G      ++K+G R + T  L 
Sbjct: 159 NGGTASYYIVIAQTDPEKKHKGINAFIVERGWE-----GFEVGPKEDKLGIRGSDTHSLI 213

Query: 291 FSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           F+N             FGF      ++ G        I + S  + ++     LA  + Y
Sbjct: 214 FNNVKVPKENRIGEDGFGFNFAMAVLNGGR-------IGIASQALGIASGAYELA--LKY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R      +I+   +   +AD+A  I AA  L F+ A   D  K  SE  A A++   
Sbjct: 265 AKTRKAFKTEIINHQAIAFKLADMATQITAARMLCFKAACEKDAGKDISESGAMAKL--- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +  ++A     EA++  GG GY++E  + R  R++    I  G+
Sbjct: 322 ----YASQVAMDTTIEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGT 365


>gi|225621130|ref|YP_002722388.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
 gi|225215950|gb|ACN84684.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
          Length = 639

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 19/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D     +  +   D  Y L+G K F+++ + ++++++ A     +G   +
Sbjct: 124 FGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAESYVVFAVTTPGIGTKGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  +    +K+G R++AT +L F N     +   N+     +  KI +  
Sbjct: 183 SAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNV---KVPKENLLGKEGQGFKIAMQT 239

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A+     A+ Y++ R   G  +  Q  +   +AD+A  + AA  L
Sbjct: 240 LDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAFKLADMATKLRAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA- 431
            +  A   D  +    E+A A++       +  ++   V+ +A++  GG+GYI+   I  
Sbjct: 300 IYSAAAMKDRHEPYGTESAMAKL-------YASEIGLEVVNQALQIHGGNGYIKGAYIVE 352

Query: 432 RHYRESPANSILLGS 446
           R YR++   +I  G+
Sbjct: 353 RAYRDAKICTIYEGT 367


>gi|218783094|ref|YP_002434412.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764478|gb|ACL06944.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 414

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 29/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV------EGRVG 254
           LTE RGG+D    T+      D  + L+G K F+  +  +D F++ A+       +  + 
Sbjct: 127 LTEPRGGSDFFGATTTAVDKGDH-FILNGQKRFIVGAEGADYFLVYAKTNPDAKPQESLS 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTG 307
           C +V R      P G+  + L   +G R      + F        N  G + G   V T 
Sbjct: 186 CLIVDR-----GP-GVNVEYLYGLMGCRGGGAGRIVFKDVKVPKENVVGKVHGAYPVFT- 238

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               M I   L +A M++   R +L  A  Y  RR   G  + +   +   IA+ A+ + 
Sbjct: 239 ---TMMIPERLGTAAMTIGSARPALDVATGYTTRRKAFGQTINNFQGVNFQIAEAAMLLD 295

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  +L +    S D A      A   R M   TK +  +    V+  AM+ +GG GY   
Sbjct: 296 ACRSLVYTTGRSADIAPY----AGQTRRMVSETKKFVTESCQKVVHNAMQVMGGIGYTNV 351

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             + R YR+    +I  GS   M +
Sbjct: 352 FPVERMYRDLRLATIWTGSNEVMSM 376


>gi|119873447|ref|YP_931454.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           islandicum DSM 4184]
 gi|119674855|gb|ABL89111.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum islandicum DSM
           4184]
          Length = 380

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 34/286 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +    I   L+E   G+D  ++ +  +++  G + ++G K W  S   +DAF++ A+
Sbjct: 112 PAIRGEKIIAFALSEPCCGSDAFSLETTAERVG-GSWVINGTKLWITSGLYADAFLVAAR 170

Query: 249 V------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGD 301
                     V  FLV R        G C +     + G R   T E++F+N     +GD
Sbjct: 171 TGSPKEKHKTVTLFLVER--------GRCVETAPVAVMGVRGTGTAEVKFNNC---EVGD 219

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
             +  G     K+++  L++    V  + + +A     EA  Y +RR      +I+  V+
Sbjct: 220 EAIVGGLNGAFKVVLEDLNNGRTCVGAIGLGIAQGAIKEAESYTKRRVAFDMPIINFQVV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA I   I A   + +        A  R + +    + A I KY   ++A      A
Sbjct: 280 QHYIASIKAQIEAVRGVVY------TAAYFRDKNSELFPLYAQIAKYLGSRLAVDATRTA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEK 460
           M+ +GG GY  +  +   YR++ A  I  G+ N +VL+ L  L EK
Sbjct: 334 MQIMGGFGYSTDSKVEMLYRDAKATEIYEGA-NEIVLNTLFKLAEK 378


>gi|9965284|gb|AAG10019.1|AF282240_3 acyl-CoA dehydrogenase [Acinetobacter sp. SE19]
 gi|14587418|dbj|BAB61751.1| acyl-CoA dehydrogenase [Acinetobacter sp. NCIMB9871]
          Length = 384

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 20/244 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A++ +   K  D  Y L+G K +++ +P +  F ++A+    + G   + 
Sbjct: 124 LTEPDSGSDAASLKTTAVKDGDH-YILNGTKRYITNAPHAGVFTVMARTSTEIKGTGGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL- 315
             + D    G+   +   K+G +   T ++ F N       L+G +    G    MK+L 
Sbjct: 183 AFIVDSKTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241

Query: 316 ---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              I++  A +SV      L +++ YA  R   G  + +  +++  +AD   +I AA  +
Sbjct: 242 KGRIHI--AALSVGAATRMLEDSLQYAVERKQFGQAIANFQLIQGMLADSKAEIYAAKCM 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D  ++ S EA+ A++ A        +M   V    ++  GG+GYI E +I R
Sbjct: 300 VLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRGVQIHGGAGYISEYAIER 352

Query: 433 HYRE 436
            YR+
Sbjct: 353 FYRD 356


>gi|71650517|ref|XP_813955.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70878886|gb|EAN92104.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 30/309 (9%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           VH      IF R  +    A   P   +S      LTE   G+D  A+ ++ +K  D  +
Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++   +D F+++A V+   G     CF+V +       +G+   R  +K+G
Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335
            R+++TVE+ F N     + + NV     +  +I I  L+   + +    V +A+     
Sbjct: 229 LRASSTVEINFENC---EVPEENVIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y  +R      + D   ++   A  A +I AA  + +  A      +S  +EAA A+
Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKKLMGESFVKEAAMAK 345

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +          ++A    ++A+E  GG G+  + S+ R YR++   +I  G+    +  +
Sbjct: 346 LFGS-------QVAEQTASKAIEWAGGIGFTRDFSLERLYRDAKIGAIYEGTSIIQLQTI 398

Query: 455 LNLLEKGTN 463
             L++K  N
Sbjct: 399 AKLIKKEYN 407


>gi|329849515|ref|ZP_08264361.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
 gi|328841426|gb|EGF90996.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
          Length = 395

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D  A+ S+ +KI DG Y L+G K W  +SP++D F++ A+ +   G +  
Sbjct: 137 FGLTEPDAGSDPGAMRSKAEKI-DGGYRLTGTKMWISNSPIADVFVVWAKSDAHNGEIKG 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+       +   LL +++   GP    
Sbjct: 196 FVLEKGMK-----GLTAPKIHGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP---- 246

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   ++   +  AE     A  Y   R   G  L    + ++ +AD+  +I 
Sbjct: 247 --FGCLNRARYGIAWGVMGAAEDCWHRARQYGLDRKQFGKPLAQMQLFQKKLADMQTEIT 304

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+   FD  K   E       M  + K   C  A  +   A +  GG+G  EE
Sbjct: 305 LGLQAALRVGQLFDAGKVAPE-------MISLIKRNNCGKALDIARVARDMHGGNGIHEE 357

Query: 428 RSIARH 433
             + RH
Sbjct: 358 YHVMRH 363


>gi|219847668|ref|YP_002462101.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541927|gb|ACL23665.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 417

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   GTD AA+ +  ++  D +Y L+G K W   + ++D F++ A+ +   G   +  
Sbjct: 140 LTEPNSGTDAAAMQATARRDGD-VYILNGEKIWISLADLADNFLVFAKTDPAAGPRGITA 198

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314
            + + +  G+    +  K+G R+         NT G +  D+ V          E  KI 
Sbjct: 199 FIVERTMPGVSSYPIHGKLGVRAG--------NTGGVVFQDVRVPLSHRLGEEGEGFKIA 250

Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD+   +V+      ++ SL  +I YAR R   G  + +  ++KR I+ +   +  +
Sbjct: 251 MAALDNGRYTVAAGATGLIQASLEASIRYARERQTFGVPIGEHQLVKRMISHMVRKLDTS 310

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R     ++    + E   A+  A ++ +           +A++  G  GY +E  
Sbjct: 311 RLLVYRAGWMKNKGIRNTRETTLAKWHATVSSFEAAD-------DALQIHGAYGYADEYP 363

Query: 430 IARHYRESPANSILLGS 446
           + R+ R +    I  G+
Sbjct: 364 VERYLRNARGAIIYEGT 380


>gi|89068383|ref|ZP_01155786.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89046037|gb|EAR52096.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 384

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 24/281 (8%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           +F  +       P  +   AI    LTE   G+D+A  T   +   DG Y L G K W  
Sbjct: 99  LFGTDAQKARWLPETRAGRAIAAFALTEPASGSDVANSTMTARADGDG-YVLDGEKTWIS 157

Query: 236 SSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +  ++D + + A+  EG     L   ++  G+P     +RL+       +    L F   
Sbjct: 158 NGGIADVYTVFARTGEGPGARGLSAFVVAAGTPGLEIAERLETIA---PHPLARLRFD-- 212

Query: 295 FGFLLGDLNVSTGPVEDMKI-LIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            G  +    +   P    K+ +  LD      A  ++   R +L E++     RHV G  
Sbjct: 213 -GCRMPADALVGAPGAGFKVAMAVLDVFRSTVAAAALGFARRALDESLARVSTRHVQGAP 271

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKM 407
           L D  +++  +AD+ALDI AA  L +R A + D    R + EAA A++ A        + 
Sbjct: 272 LADLQLVQGHLADMALDIDAAALLVYRAAWAKDSGAPRVTREAAMAKLFA-------TEQ 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A  VI +A++  GG G      + R YRE  A  I  G+ +
Sbjct: 325 AQRVIDQAVQLHGGDGVRAGGIVERLYREIRALRIYEGASD 365


>gi|319949102|ref|ZP_08023196.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4]
 gi|319437251|gb|EFV92277.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4]
          Length = 389

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 13/259 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 130 LSEREAGSDAASMRTRAKADGDD-WILNGSKAWITNGGKSTWYTVMAVTDPDKGAGGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G    + + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 189 FMVHADDEGFGVSKTEKKLGIKGSPTAELYFENV--RIPGDRIIGEPGTGFKTALQTLDH 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D    +  +AD+A+ + AA  + + 
Sbjct: 247 TRPTIGAQAVGIAQGALDAAIAYTKERRQFGKAISDFQNTQFMLADMAMKVQAARLMVYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + +   +   E      MA  +K +   +A  V   A++  GG+GY  +  + R  R
Sbjct: 307 AAANAERGSAPGGE--KLGFMAAASKTFASDVAMEVTTNAVQLFGGAGYTRDFPVERMMR 364

Query: 436 ESPANSILLGSG--NAMVL 452
           ++    I  G+   N MV+
Sbjct: 365 DAKITQIYEGTNQINRMVM 383


>gi|295839766|ref|ZP_06826699.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB74]
 gi|197698456|gb|EDY45389.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB74]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P     + I   LTE   GT  A IT+   +  D  Y LSG K  ++  +  D +++ A+
Sbjct: 110 PSVTGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           VEG  G       LVPR     +  G+  +   + +G        L F  T       LG
Sbjct: 168 VEGSTGHEGTVALLVPR-----NAPGVTVEDTSHTMGVTGTDHASLTFDRTPVPVDHRLG 222

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
               + G   D+ +  +L  + +SV+   V LAE     A+ YAR R   G  L  +  +
Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+ A DI AA  L    A  F++    +E+A+    MA   K     M   V  +A
Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEQG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY + + I R YR++ A     G+
Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363


>gi|313885601|ref|ZP_07819351.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619331|gb|EFR30770.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 402

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 42/288 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           +APK+ S E+                 GLTE   G+DIA   +   ++    + ++G K 
Sbjct: 131 YAPKLASYEWHSC-------------FGLTEPLHGSDIAGGLATTAELQGDKWVINGEKK 177

Query: 233 WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           W   +  +D   + A+   +G++ CF+VP     G+P GL   ++  KI  R      ++
Sbjct: 178 WIGGAATADVLPIFARDVADGQIKCFMVP----GGTP-GLTVDKIDGKISLRLIQNGHIK 232

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--VSGMRV-SLAEAIHYARRRHVSGG 347
            +N        L  +     D+  ++Y   A ++   +G+   +LA  + Y + R   G 
Sbjct: 233 MNNVQVDKTARLE-NINSFRDVAKILYTTRADVAHLATGLHAGALANTLKYVKEREQFGK 291

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +A +  +   + ALS RLA          E+  Y  + + + K      
Sbjct: 292 KISQFQLVQEKLARMQANCVTSLALSHRLAQ-------LQEQGRYEEVQSSLAKMNNAYR 344

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPA----------NSILLG 445
               +A   E +GG+G I E  +AR + ++ A          NS++LG
Sbjct: 345 LRETVALGRELLGGNGIIVEHDVARFFVDAEAAYSYEGTHEVNSLILG 392


>gi|239941416|ref|ZP_04693353.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239987880|ref|ZP_04708544.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291444861|ref|ZP_06584251.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291347808|gb|EFE74712.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 385

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 56/311 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K W PK  + E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLATDEQKKRWLPKFATGEE-------------MWALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQ 273
            DG  Y L+G K F++  + +D  I+ A+       + R G  L      D    G    
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPREDDRRFGISL---FAVDTKSEGYSVG 202

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAIMS---- 324
           R  +K+G + + T EL F         D+ V   PVED+     K   YL + + S    
Sbjct: 203 RKLDKLGLKVSDTAELAFV--------DVKV---PVEDLMGEENKGFGYLGTNLASERWG 251

Query: 325 -----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
                 +    ++  A  Y + R V G  +      K  +A    ++ AA A++ R   +
Sbjct: 252 IAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAQAVADRALEA 311

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + EAA A++       +C ++A  VI   ++  GG G++ E  IAR Y ++  
Sbjct: 312 LDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRV 364

Query: 440 NSILLGSGNAM 450
           N I  G+   M
Sbjct: 365 NRIYGGTSEVM 375


>gi|254462692|ref|ZP_05076108.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206679281|gb|EDZ43768.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 40/292 (13%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  +       P  +   AI    LTE + G+D++  T     + D  Y ++G K 
Sbjct: 101 ALSLFGADAQKAEWLPKVRAGKAISAFALTEPQSGSDVSNSTMTAALVGDH-YVINGEKT 159

Query: 233 WFLSSPMSDAFIMLAQV---EGRVG--CFLVP---------RLLEDGSPNGLCYQRLKNK 278
           W  +  ++D + + A+    EG  G   F+VP           LE  SP+ L     K+ 
Sbjct: 160 WISNGGIADVYTVFARTGEGEGARGLSAFVVPADTPGLDVIERLETISPHPLATLSFKD- 218

Query: 279 IGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              R  A+  +  S + F   +G L+V    V           A  ++   R +L EA+ 
Sbjct: 219 --CRVPASALIGQSGSGFKIAMGVLDVFRSTV-----------AAAALGFARRALDEALA 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIM 396
               RHV G  L D  +++  IAD+A+DI A+  L +R A + D    R + EAA A   
Sbjct: 266 RVTSRHVQGAPLFDLQMVQGHIADMAVDIDASALLIYRAAWAKDSGAPRVTREAAMA--- 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               K +    A  VI +A++  GG G    + +   YRE  A  I  G+ +
Sbjct: 323 ----KLFSTDQAQKVIDKAVQLHGGDGVRTGQMVESLYREIRALRIYEGASD 370


>gi|23016676|ref|ZP_00056429.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 389

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 41/303 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G K
Sbjct: 117 YLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGD-RYILNGTK 161

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P +D  ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F
Sbjct: 162 MWITNGPDADVIVVYAKTDVTAGPRGITAFLVEKTFKGFSVAQKLDKLGMRGSNTGELVF 221

Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           +       N  G +   +NV    ++  +++  L    + +  M   +   + Y   R  
Sbjct: 222 TDCEVPEENVLGAVGKGVNVLMSGLDFERVV--LTGGPLGI--MAACMDVVVPYIHERVQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +M+  +AD+     A  A ++ +A + D  ++  ++AA   +       W 
Sbjct: 278 FGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGETSRKDAAGVILYGAEKATW- 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                 +  EA++ +GG+GYI E +  R  R++    I  G+G + +  +L     G  L
Sbjct: 337 ------MALEAIQTLGGNGYINEYATGRLLRDAKLYEI--GAGTSEIRRML----IGREL 384

Query: 465 FEQ 467
           FE+
Sbjct: 385 FEE 387


>gi|307944794|ref|ZP_07660132.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307772008|gb|EFO31231.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 405

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++  K   G Y L+G K W  +SP++D F++ A+ E   G  + 
Sbjct: 147 FGLTEPDAGSDPAGMRTRAIKTDSG-YRLTGSKMWISNSPIADVFVVWAKSEAHDGA-IR 204

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+   N       LL +++   GP       
Sbjct: 205 GFVLEKGM-KGLSAPKVGGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP------F 257

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 258 GCLNRARYGISWGVMGAAEDCWTRARQYGLEREQFGRPLAQTQLFQKKLADMQTEIALGL 317

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R+   FD  +   E       M  + K   C  A  +  +A +  GG+G  EE  +
Sbjct: 318 QAALRVGQLFDAGQVAPE-------MISLIKRNNCGKALDIARQARDMHGGNGIQEEYHV 370

Query: 431 ARH 433
            RH
Sbjct: 371 MRH 373


>gi|302520578|ref|ZP_07272920.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302429473|gb|EFL01289.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 608

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  + +DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316

Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378
           A+ YA+ R V G  L +              P ++R++           AL    A   +
Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375

Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           S    ++  E+AA       ++ PI K +  + +   +A++++  GGSGY++E  + ++ 
Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435

Query: 435 RESPANSILLGS 446
           R++  +++  G+
Sbjct: 436 RDAKIDTLYEGT 447


>gi|154331163|ref|XP_001562021.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059343|emb|CAM37045.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 416

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 17/249 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  ++  + +LA+ EG    F+V  
Sbjct: 164 VTEPTGGSDVAGLKTTARKEGD-RWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-- 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319
              D +  G+     +  +G R + T  + F N        +     G    M++  +  
Sbjct: 221 ---DANAPGVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTR 277

Query: 320 S--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           S  AI +V   R +  EA  YAR R   G  +     +   +A++A  + A   +++R  
Sbjct: 278 SSVAIAAVGLSRRATDEATGYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +  +  A+ A++MA         +A    A A++  GG+GY     + + YR+ 
Sbjct: 338 WDTDQGRRNTYYASCAKMMA-------ANLAEKCAANAVQIFGGNGYNTGYPVEKLYRDC 390

Query: 438 PANSILLGS 446
              SI  G+
Sbjct: 391 KIFSIYEGT 399


>gi|330504164|ref|YP_004381033.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328918450|gb|AEB59281.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR---- 252
           + + +TE   G+D+A + +      D  + L+G K F+S+  ++D  I+ A+ +      
Sbjct: 122 LAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADVVIVAAKTDPANKHA 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +G FLV R    G P     ++LK K+G  S  T EL F++       LLGD       +
Sbjct: 181 MGLFLVER----GMPGFERGKKLK-KLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYL 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     L +A  +V+G   +L   I Y R R   G  +      +  +A++   I  A
Sbjct: 236 MNMLAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R     ++ K   E AA A++       +  ++   V+ E ++  GG GY+ E  
Sbjct: 296 QVFTDRCVMDHNQKKLTPEVAAEAKL-------FTTELLGKVVDEGVQLHGGWGYMWEYP 348

Query: 430 IARHYRESPANSILLGSGNAM 450
           I + Y  +    I  G+   M
Sbjct: 349 ICKMYANARIQRIFAGTSEIM 369


>gi|291297090|ref|YP_003508488.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290472049|gb|ADD29468.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 592

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 41/291 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E   G+ +  + ++ +  +DG Y L+G K ++S    +       ++LA++ G     
Sbjct: 163 LSEPHAGSSLTDLLTRAEPQADGTYRLNGSKMWISGGDHEIAENIVHLVLAKIPGGPPGV 222

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----D 301
             +  F+VP+ L  EDG     NG+    L +K+G R      L   +  G L+G     
Sbjct: 223 KGISLFIVPKYLVHEDGRLGPRNGVRVAGLNHKMGYRGIPNCLLSLEDAVGELVGAPHQG 282

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL--AEAIHYARRRH----VSGGI-LIDQP- 353
           L+     + + +I + + +  ++ +G   +L  A+     RR H     S  + +I  P 
Sbjct: 283 LSYMFTMMNEARIGVGMGAMALAYTGYLHALEYAQTRTQGRRLHDKNPASPAVPIIQHPD 342

Query: 354 -----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWC 404
                +M++A A+  L +    A   RL +    A +  E A  AR    ++ P+ K W 
Sbjct: 343 VRRMLIMQKAYAEGCLHLCLYAA---RLVDEERTAPT-PEAAEQARLLLEVLTPVVKAWS 398

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            ++       A++  GG GY  + ++ + YR++  N+I  G+     LD+L
Sbjct: 399 SELGMRANELAIQVHGGYGYTRDYNVEQFYRDNRLNAIHEGTNGIQALDLL 449


>gi|126740626|ref|ZP_01756313.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126718427|gb|EBA15142.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 385

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 33/288 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W PK+ + E             +   + +TE   G+D+  I +   ++    Y L+G 
Sbjct: 112 KRWLPKMATGE-------------MVCAIAMTEPGTGSDLQNIKTTA-RLEGNEYVLNGS 157

Query: 232 KWFLSSPMSDAFIMLAQ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           K F+++      I++       +G  G  L+  ++E     G    R   K+G +S  T 
Sbjct: 158 KTFITNGQQAGLIIVVAKTDPSQGAKGVSLM--MVETAEAEGFARGRNLEKLGLKSQDTS 215

Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRR 342
           EL F N       LLG +    G  + MK L    L  A+   + M  +L E + Y   R
Sbjct: 216 ELFFDNVRLPPENLLGGVE-GQGFYQLMKSLPQERLVVALGGAAAMNKALEETVAYTSER 274

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L++    +  +A++     A  A  F      D+  ++          A + K+
Sbjct: 275 RAFGKPLLEMQNTRFKLAEV--KTIAHIARVF-----LDDCVAKHLRGELDATTASMAKW 327

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           W  +M    I E ++  GG GY+ E  IA  Y ++    I  GS   M
Sbjct: 328 WVTQMQCETIDECLQLFGGYGYMSEYPIANMYADARVQKIYGGSNEIM 375


>gi|294650323|ref|ZP_06727690.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823736|gb|EFF82572.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 431

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 26/226 (11%)

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--- 278
           +G + ++G K  +     +D FI+ A+  G+   F+V            C + +  K   
Sbjct: 221 NGKFYITGEKTLVVLGDTADVFIVSAEWNGKPDIFVVQ-----------CDETIAIKANP 269

Query: 279 -IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +G ++  T  L+F+ T    LGD +       D+  L++   AI +   ++   A  I 
Sbjct: 270 AMGLKAAETATLQFNQTPALRLGDTDFDYTAFVDLGNLMWCAMAIGTCEAIK---AYCIK 326

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +  +  +   IAD+A++I A   L    A+  +  +    EA  AR++ 
Sbjct: 327 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLVLNAASLAEAGQPFHREAYLARLL- 385

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 425


>gi|315499040|ref|YP_004087844.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417052|gb|ADU13693.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 28/276 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           L ++E   G+D+ ++  + +K  +  Y L+G K W  + P +D  ++ A+  EG  G   
Sbjct: 129 LAMSEPGAGSDVMSMKLRAEKRGE-HYVLNGSKMWITNGPDADVLVVYARTAEGSKG--- 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V   L +    G    +  +K+G R + T EL F++     + + NV +       +L+ 
Sbjct: 185 VTAFLIEKDFAGFSVAQKLDKLGMRGSHTGELVFADC---EVPEENVLSTEGRGAAVLMS 241

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG     MR  L   I Y   R   G  +    +M+  IAD+     A  A
Sbjct: 242 GLDYERVVLSGGPLGIMRACLNAVIPYVHERQQFGAPIGTFQLMQGKIADMYATWGACRA 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA   + A     W       +  EA++C+GG+GY+ E    
Sbjct: 302 YVYAVAAACDRGETTRKDAAACILYAAEKATW-------MAGEAIQCLGGNGYVNEYPTG 354

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 355 RLWRDAKLYEI--GAGTSEIRRML----IGRELFEE 384


>gi|121609456|ref|YP_997263.1| isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121554096|gb|ABM58245.1| Isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 388

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 40/256 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D  A+ ++  + +D  Y +SG K F++ +P++  F +LA+ +      G 
Sbjct: 122 FALTEPEAGSDACALRTRALRDADH-YLISGSKCFITNAPIAQLFTVLARTDPAHPGAGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  FLV R        GL   +   K+G   +    L F N       L+G      G  
Sbjct: 181 ISAFLVER-----DTPGLVVGKPYQKMGQAGSPVAPLYFDNCRVPAANLIGGQE-GRGFK 234

Query: 310 EDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360
             MK+L    I+L +A+     MR+ L EA+      H +G     QPV     ++  +A
Sbjct: 235 TAMKVLNKQRIHL-AALCIGPAMRM-LQEAVQ-----HTAGRRQFGQPVGSFQLVQAMVA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   +I AA AL    A   D  +  + +A+       + KY+  +M   V    ++ +G
Sbjct: 288 DCQTEIHAARALVLETARQRDLGQDVAMQAS-------MCKYFASEMCARVADRCVQMLG 340

Query: 421 GSGYIEERSIARHYRE 436
           G G+I +  + R YR+
Sbjct: 341 GYGFIADNPVERFYRD 356


>gi|152975810|ref|YP_001375327.1| acyl-CoA dehydrogenase type 2 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024562|gb|ABS22332.1| Acyl-CoA dehydrogenase type 2 domain [Bacillus cytotoxicus NVH
           391-98]
          Length = 384

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 33/276 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++ W P +F+   +   K  +   +       +  RGG        +G+K     + ++G
Sbjct: 101 NQSWKPDMFAWFCEEVKKGALFNRAATERKTGSPTRGGRPETLAVKKGEK-----WIING 155

Query: 231 HKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K F + +PM D FI+ A +EGR  +G F+VPR     +  G+  +   + +  R  A+ 
Sbjct: 156 RKTFTTMAPMLDYFIISASIEGREEIGEFVVPR-----AQKGVSIEETWDSVAMRGTASH 210

Query: 288 EL-----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHY 338
           +L     E S+ +     D+  S    + +  L+++ +  + ++       +  AE+   
Sbjct: 211 DLVLRNVEISDKY---FTDIKGSQSKPKGVGWLLHIPACYLGIAQAARNYALRFAESYQP 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              +H    +    P ++R + ++ L++  A    +++A  +DE   +  ++  A + A 
Sbjct: 268 NSLKHPISSL----PNIRRLVGELELELMQARMFLYQIAKKYDEVDDK--QSLQAELAA- 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             KY     A +V+ +AM  +G     E+  + R+Y
Sbjct: 321 -AKYIATNAAISVVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|313221180|emb|CBY32004.1| unnamed protein product [Oikopleura dioica]
          Length = 421

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 167/415 (40%), Gaps = 47/415 (11%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLHCSI 119
           LS +AQ  AR+ N+ + +L   G G   +D      + +    W  +    +        
Sbjct: 12  LSASAQLGARLHNWQSEKLTDIGTG-VNYDSDMDIFREQCRKFWSGISAERVEK------ 64

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL----MTTPRVHKDW- 174
           WD++  P          A  L +    E G + +P     SMVA        P+ +    
Sbjct: 65  WDKTHMPDAEIWREAGEAGLLCIDTPAEYGGIGAP--FEYSMVACEEQAYAGPKFYGPGF 122

Query: 175 -------APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG 224
                  AP I  F  E       P   T   I  +G+TE  GG+D+ A+ +   +  D 
Sbjct: 123 GLHSGIVAPYITSFGTEEQKHKYIPSMTTGETISCIGMTEPSGGSDLQAMKTNAVRDGDD 182

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            + L+G K F+S+       ++A   + EGR    +   L++     G    +   KIG 
Sbjct: 183 -WILNGSKTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTREHKGFSKGKNLRKIGQ 241

Query: 282 RSNATVELEFSNT---FGFLLGD---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            S  T EL F++       LLG+   LN     + +      +  A+ +++ +  +  + 
Sbjct: 242 HSYDTAELFFNDVRLPASALLGEEEGLNKGFYMMMNELPRERVGCALEALARLENAFEQT 301

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y + R   GG L D+ V+K ++A+I  +I +   ++      +   +  +E A+  ++
Sbjct: 302 RQYTQERKAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLYSRGELDNETASMFKL 361

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A   KY  C      + + ++  GG GY+ E  IA+ Y  +   +I  G+   M
Sbjct: 362 YA-TEKYVSC------VNKLLQHWGGWGYMWEYDIAKEYAGARVFTIYAGTSEIM 409


>gi|254819967|ref|ZP_05224968.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 380

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 45/300 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223
           +TT    + W PK  S EY              IG + ++E   G+D+A I +  +   D
Sbjct: 102 LTTEEQKERWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+S+ +    ++ A          G  L+  ++EDG   G    R  +KI
Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330
           G  S  T EL F +       L+G+LN      VS  P E + +  Y      ++   R 
Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L     YA  R   G  +    V +  +A++   + AA     +   S ++     ++A
Sbjct: 258 ALDLTKAYALERTAFGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K+W  ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M
Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370


>gi|163857879|ref|YP_001632177.1| glutaryl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261607|emb|CAP43909.1| glutaryl-CoA dehydrogenase [Bordetella petrii]
          Length = 397

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 34/270 (12%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D   + ++      G Y LSG+K W  +
Sbjct: 115 FGSEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPNGMETRAVLTGSG-YKLSGNKMWITN 173

Query: 237 SPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-- 289
           SP++D F++ A+      +G++  F++ + ++     GL    +  K+G R++ T E+  
Sbjct: 174 SPIADVFVVWAKCVGGDYDGKIRGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVM 228

Query: 290 -EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RH 343
            E   +   +L D++   GP         L+SA   ++   +  AEA  H AR+    R 
Sbjct: 229 DEVEVSAEQMLPDVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L    ++++ +AD+  +I        RL    DE  +  E       +  I K  
Sbjct: 283 QFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRN 335

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            C  A  +   A + +GG+G  +E  +ARH
Sbjct: 336 SCGKALDIARLARDMLGGNGISDEFGVARH 365


>gi|182625512|ref|ZP_02953283.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|177909200|gb|EDT71665.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 24/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD A    Q   + +G  Y L+G K F+++  ++D FI+ A
Sbjct: 113 PLAKGEKLGAFGLTEPGAGTDAAG--QQTTAVLEGDNYILNGSKIFITNGGVADTFIIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   + + +  G    +L+ K+G R+++T EL   N       L+G    
Sbjct: 171 MTDKSQGTRGISAFIVEKNFPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGK 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
             G    MK L   D   + ++   + +AE     A+ Y + R      L     ++  +
Sbjct: 231 GFGIA--MKTL---DGGRIGIAAQALGIAEGALEEAVAYMKERKQFCRSLSAFQGLQWMV 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I AA  L ++ A   +E K  S +AA A++ A         +A  V  +A++  
Sbjct: 286 AEMDTKIEAARFLVYKAACLKEEGKPYSIDAARAKLFA-------ADVAMEVTTKAVQLF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY +E  + R  R++    I  G+
Sbjct: 339 GGYGYTKEYPVERMMRDAKITEIYEGT 365


>gi|171317157|ref|ZP_02906358.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097650|gb|EDT42482.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 377

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKLGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A  I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|325479667|gb|EGC82759.1| butyryl-CoA dehydrogenase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 378

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 34/276 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD +   +  +   D  Y L+G K F+++   +D +++ A  +   G   +
Sbjct: 122 FALTEPDAGTDASGQKTVAKLDGDN-YILNGSKIFITNAGYADTYVVFAMTDKEQGTRGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----K 313
              + +    G  +   ++K+G + ++T+EL F         D  V   P E+M     K
Sbjct: 181 SAFIVEKGMEGFDFGTTEDKMGIKGSSTMELIFR--------DCKV---PKENMLGEEGK 229

Query: 314 ILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              Y    LD   + ++   + +AE     +I Y + R+  G  L      +  +A++A+
Sbjct: 230 GFKYAMQTLDGGRIGIAAQALGIAEGALEKSIKYVKERNQFGRPLAKFQNSQFKLAEMAI 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI +A  L ++ A   D  +S +       + A   K    ++A  V  +A++  GG GY
Sbjct: 290 DIESARHLVYKAACLKDAGESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I+E  + R  R++    I  G+   M++ V   L K
Sbjct: 343 IKEYEVERMMRDAKITEIYEGTSEVMLMVVSGALLK 378


>gi|297194257|ref|ZP_06911655.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720549|gb|EDY64457.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 50/317 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + W P++ S E             +    GLTE  GG+D     +   + 
Sbjct: 100 IHLFGTEEQKRQWLPRLCSGE-------------LLGAFGLTEPDGGSDAGGTRTTAVRD 146

Query: 222 SDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCY 272
            D  + ++G K F+++  +D    + +  V GR       +   +VP     G+P G   
Sbjct: 147 GD-EWVINGSKCFITNSGTDITGLVTVTAVTGRKEDGRPEISAIIVP----SGTP-GFTV 200

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
               +K+G  ++ T EL F++       LLG      G  + ++IL   D   +++S + 
Sbjct: 201 AAPYSKVGWNASDTRELSFADVRVPVANLLG--QEGRGYAQFLRIL---DEGRIAISALA 255

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             LA     E++ YAR RH  G  +     ++  IAD+ +    A          + +A 
Sbjct: 256 TGLAQGCVDESVKYARERHAFGRPIGSNQAIQFKIADMEMKAHMARV-------GWRDAA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           SR       +  A + K +   +A     EA +  GG G++ E  +AR +R+S    + +
Sbjct: 309 SRLVHGEPFKKEAAVAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILEI 366

Query: 445 GSGNAMVLDVLNLLEKG 461
           G G + V  +L   E G
Sbjct: 367 GEGTSEVQRMLIARELG 383


>gi|167616827|ref|ZP_02385458.1| non-ribosomal peptide synthetase [Burkholderia thailandensis Bt4]
          Length = 1293

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+++ AITS  Q++    + +SG K W  SS  +    + A+     G  +V  
Sbjct: 761  LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 818

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R     T+ L+ +  +    LG         +       
Sbjct: 819  AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 877

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ I D+   I   +AL  +L
Sbjct: 878  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 936

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  ++  E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 937  AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 990

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 991  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1023


>gi|11498741|ref|NP_069970.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304]
 gi|2649449|gb|AAB90105.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304]
          Length = 387

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 36/274 (13%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--- 247
           + +  V +G+  TE   G+D A I ++  K  D  + ++G K F+S+     F+++    
Sbjct: 116 LARGDVIMGMANTEPDAGSDAANIKTRAVKEGDE-WVINGTKQFISNGSIADFLLVTART 174

Query: 248 -QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +++ +     +   + + +  G    ++K K+G R+  T E+ FSN             
Sbjct: 175 REMDPKAKHRGISYFIVETNREGYKANKIKGKMGIRATDTAEISFSNV-----------R 223

Query: 307 GPVEDM---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352
            P E++          ++ + D + + V    V +A+      I Y ++R      L   
Sbjct: 224 VPAENLVGEEGKGFYYMMEFFDMSRVWVGAQAVGIAKGALKLVIDYVKQRKAFNVPLATF 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IA++A  I AA  L +R A        + E+      ++ + K++  ++A    
Sbjct: 284 QYIQFKIAELATKIEAARTLVYRAA------AVQVEQGKPDNTLSSMAKWYAGEVAVETA 337

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             A++  GG GYI+E +I + YR++    I  G+
Sbjct: 338 NWALQFHGGYGYIDEYAINQFYRDAKITEIYEGA 371


>gi|307182564|gb|EFN69757.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 404

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A      G   + 
Sbjct: 147 LTEPGAGSDAFSLKTVAKK--DGSDYIINGTKMWISNSDIAGVFLVFANANPSAGYRGIT 204

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318
               D    GL   + ++K+G +++ T  + F N     + + N+     +  K    +L
Sbjct: 205 TFFVDRDTPGLSVAKPEDKLGIKASGTCMIHFDNV---RVPEKNILGEFGQGYKYAAGFL 261

Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   + +    + +A+      I Y   R   G  +     M+  IA +A ++  A  L 
Sbjct: 262 NEGRVGIGAQMIGIAQGCLDATIPYTLERKQFGHDVFSFQSMQHQIAQVATELECARLLV 321

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D  K   +EAA A+++A  T       A  V A+ ++ +GG G+  E    ++
Sbjct: 322 YNAARLVDAKKDVMKEAAMAKLVASET-------ALRVTAKCIDFMGGVGFTTEFPQEKY 374

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +   + K
Sbjct: 375 FRDSKIGTIYEGTSNMQLSTIAKCIRK 401


>gi|320009824|gb|ADW04674.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 608

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 146/312 (46%), Gaps = 51/312 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  +  DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKFHFDWTTGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIAALSTGYLN 316

Query: 335 AIHYARRRHVSGGIL---IDQ----------PVMKRAIADIALDIAAATALSFRLANSFD 381
           A+ YA+ R V G  L   +D+          P ++R++           +L    A+  D
Sbjct: 317 ALEYAKER-VQGTDLSQFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQD 375

Query: 382 --EAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             + K  + E A A      ++ PI K +  + +   +A++++  GGSGY++E  + ++ 
Sbjct: 376 AIQVKEAAGEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435

Query: 435 RESPANSILLGS 446
           R++  +++  G+
Sbjct: 436 RDAKIDTLYEGT 447


>gi|94309053|ref|YP_582263.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93352905|gb|ABF06994.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 376

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  Y L+G K F++S   +D  I++A 
Sbjct: 111 PLAQGDMLGAFCLTEPHVGSDASALRTTATRDGDH-YVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      S  G    RL+ K+G  S+ T ++ F N       +LG
Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEEKLGQHSSDTAQIVFENCRIPAANMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  S+   R +   A+ YA+ R   G  L     ++
Sbjct: 225 EEGAGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLADMATQIDVARQMVWHAASLKDAGRPCLKEAAMAKLFA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVTDFPVERIYRDVRVCQIYEGTSD 365


>gi|315446576|ref|YP_004079455.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264879|gb|ADU01621.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 464

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 142/332 (42%), Gaps = 58/332 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P     WAP+ F    D      ++  ++AI    +E  GG+D+  + +  +
Sbjct: 96  SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145

Query: 220 KIS---DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270
           +     D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL
Sbjct: 146 RAGPEPDADWIIDGHKMWIGNGGIANVHVVNAVVDQELGHKGQALFVVP----GGTP-GL 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306
              R  +K+G R++ T EL+F++       LLG                       + + 
Sbjct: 201 DMVRKLDKLGCRASHTAELKFNSVRVPADHLLGGQEKLDHKLARAREAVEGGRHSGSATL 260

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G  E  + ++    A  ++   R +L     YA RR   G  +ID   +   +AD+A  +
Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGAPIIDNQGISFPLADLATGL 316

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++R   S+  A        + R    ++K    ++A      A++ +GG GY++
Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAIQTMGGYGYVK 370

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + + YR++   +I  G+     + + N L
Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402


>gi|213157970|ref|YP_002320768.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213057130|gb|ACJ42032.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
          Length = 387

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    L+ K+G  ++ T  L F         LLG  N     + +  
Sbjct: 185 GISMLLIDAHSEGITKTPLR-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 304 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377


>gi|138896595|ref|YP_001127048.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196249296|ref|ZP_03147994.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|134268108|gb|ABO68303.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196211053|gb|EDY05814.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 594

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 145/356 (40%), Gaps = 61/356 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G+    F+V
Sbjct: 150 LTEPGSGSDALGAKTTAKLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGQHFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            R        G+     + K+G +S++T       V +   N  G       +  G V  
Sbjct: 210 ERDFP-----GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL        + +V G + +L   + YA +R      +    + +   A +A  + AA
Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISKFTLTQEKFATMAARLYAA 318

Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  +R    FDE             K  ++  A   I   + K++  ++   ++ E ++
Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEIAKSIAEYAIECSLNKFFSTEVLDYIVDEGVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465
             GG G+++E  I R YR+S  N I  G+     L V            L L +K   L 
Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLFQKAQQLQ 438

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           E+L     ++ GS              + +++K L R   +KIAL  +  A+ + G
Sbjct: 439 EELMMMTAEEPGS-------------GVLEQEKYLVRN-AKKIALMVAGLAVQKYG 480


>gi|145245473|ref|XP_001395004.1| glutaryl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134079704|emb|CAK97130.1| unnamed protein product [Aspergillus niger]
          Length = 428

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 19/252 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           + K  +A   GLTE   G+D  ++ +  ++     G Y LSG K W  +SP+SD  I+ A
Sbjct: 155 LAKGKLAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYLLSGTKTWITNSPISDIMIVWA 214

Query: 248 --QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
             Q  G++  F+V R      P  L    +KNK   R++ T  ++  +       +  ++
Sbjct: 215 KLQTTGKIRGFVVER--SQCPPGTLETPAIKNKTALRASITGMIQMDDCPVPAENMFPEV 272

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361
               GP   +     L  A  ++  +   L+ A  YA  R+   G  L    ++++ +AD
Sbjct: 273 QGLAGPFTCLNS-ARLGIAFGAMGALEDCLSRARTYALERKQFKGNPLAKYQLIQKKLAD 331

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A D A  T  + ++A   D  K   E       M  + K   C  A A      E  GG
Sbjct: 332 AATDAAYGTLAATQVARLKDAGKCTPE-------MISMVKRQNCDRALANSRILQEVFGG 384

Query: 422 SGYIEERSIARH 433
           +   +E  IARH
Sbjct: 385 NATSDEYHIARH 396


>gi|73538578|ref|YP_298945.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121915|gb|AAZ64101.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 382

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 43/298 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    ++W PK+ S E             +   + ++E   G+D+ +I ++  +  D  Y
Sbjct: 106 TEAQKQNWLPKMASGE-------------IVAAIAMSEPGAGSDLKSIKARAVRDGDQ-Y 151

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+G K F+++  ++D  +++ + +   G  G  +V  ++E  +  G    R+  KIG +
Sbjct: 152 VLNGSKTFITNGFLADLILVVCKTDPDKGAKGVSIV--VVETENLPGFRRGRILEKIGQK 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSL 332
              T EL F +        L    G          P E M I      A+ ++S M  ++
Sbjct: 210 GQDTAELFFDDVRVPCTNLLGTEEGKGFYQLMQQLPQERMII------ALGALSAMERAV 263

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y R R V G  L+D    +  +A+       A A         D+  ++      
Sbjct: 264 ELTTDYVRERKVFGATLLDMQNTRFKLAECKTKAVIAGAF-------VDDCMAKVLRDEL 316

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               A + K+W  + +  +I E ++  GG GY+ E  IAR Y  +    I  GS   M
Sbjct: 317 DPETAAMAKWWGTQTSCEIIDECLQLHGGYGYMMEYPIARMYVNARVGKIYGGSNEIM 374


>gi|170058853|ref|XP_001865105.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167877781|gb|EDS41164.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 423

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256
           L ++E   G+D+ ++ ++  K  D  Y L+G K W  + P +D +I+ A+ +   +    
Sbjct: 163 LAMSEPGSGSDVVSMKTRADKKGD-YYVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHG 221

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E  +P G       +K+G R + T EL F +       +LG LN   G    M 
Sbjct: 222 ITAFIVERDTP-GFSQGPKLDKLGIRGSGTCELIFEDAKVPAKNILGQLN--KGVYVLMS 278

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L Y  L  A   V  M+ +   A  YA  R      + +  +++  +AD+   + A  A
Sbjct: 279 GLDYERLVLAAGPVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRA 338

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A S D  K+  ++ A   +       +C + A  V  EA++ +GG+GYI +    
Sbjct: 339 YLYSVARSCDLGKANPKDCAGVIL-------YCAEKATQVALEAIQILGGNGYINDYPTG 391

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 392 RIMRDAKLYEIGAGT 406


>gi|163734530|ref|ZP_02141969.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392023|gb|EDQ16353.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 414

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K   G Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 156 FGLTEPDAGSDPAGMKTRAEKTPTG-YKLTGSKMWISNSPIADVFVIWAKSEAHGGKIRG 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++ NK+  R++ T E+           LL ++    GP    
Sbjct: 215 F----VLEKGM-TGLSAPKVGNKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGP---- 265

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   RH  G  L    + ++ +AD+  +IA
Sbjct: 266 --FGCLNRARYGISWGVMGAAEFCWHAARQYGLDRHQFGKPLAGTQLFQKKLADMQTEIA 323

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S ++    D A++  E       M  I K   C  A  V   + +  GG+G   E
Sbjct: 324 LGLQGSLQVGRLMDSAQAAPE-------MISIMKRNNCGKALDVARMSRDMHGGNGISGE 376

Query: 428 RSIARH 433
             + RH
Sbjct: 377 FQVIRH 382


>gi|318059222|ref|ZP_07977945.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318079782|ref|ZP_07987114.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 608

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  + +DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316

Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378
           A+ YA+ R V G  L +              P ++R++           AL    A   +
Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375

Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           S    ++  E+AA       ++ PI K +  + +   +A++++  GGSGY++E  + ++ 
Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435

Query: 435 RESPANSILLGS 446
           R++  +++  G+
Sbjct: 436 RDAKIDTLYEGT 447


>gi|257140755|ref|ZP_05589017.1| AMP-binding domain-containing protein [Burkholderia thailandensis
            E264]
          Length = 1299

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+++ AITS  Q++    + +SG K W  SS  +    + A+     G  +V  
Sbjct: 767  LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 824

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R     T+ L+ +  +    LG         +       
Sbjct: 825  AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 883

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ I D+   I   +AL  +L
Sbjct: 884  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 942

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  ++  E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 943  AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 996

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 997  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1029


>gi|169629167|ref|YP_001702816.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169241134|emb|CAM62162.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 42/297 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T  +   W PK+ S E               IG + +TE   G+D+ ++ ++   + DG 
Sbjct: 106 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 149

Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+++   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R 
Sbjct: 150 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 209

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
             T EL F         LLG      G ++ M  L    L  A+ +V+ M ++L + + Y
Sbjct: 210 QDTSELFFDEVRVPRSHLLGQAE-GQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393
            R R   G  +      K  +A+ A +   A       +   LA   D            
Sbjct: 269 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQT--------- 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + K+W  + A  V+ + M+  GG GY+ E  I+R + +     I  G+   M
Sbjct: 320 ---VAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373


>gi|116624389|ref|YP_826545.1| butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227551|gb|ABJ86260.1| Butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 391

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 18/276 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+    +     L+E   G+D  A+ ++ +   D  + L+G K W  ++  +  F++ A 
Sbjct: 124 PLLAEKMVASYALSEAGSGSDAFAMATRAEDKGDH-FLLTGRKLWITNAAEAGFFLLFAN 182

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   V   L +    G    + ++KIG R+++T EL   N     +   NV    
Sbjct: 183 ANPEAGYKGVTAFLIERDFPGFAVGKKEDKIGLRASSTCELILDNC---RVPRENVMGEV 239

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI I  L+   +++    + LA      A+ YAR R   G  + +   ++  +A +
Sbjct: 240 GKGYKIAIETLNEGRIAIGAQMIGLARGALDHAVTYARERKQFGKPIGEFQGVQFDLAKM 299

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+++ AA  L +  A   D       EAA A       KY+  ++A  V ++++E  GG 
Sbjct: 300 AVEVEAARLLVYNAARLRDAGLPFLAEAAMA-------KYYSSEIAERVASKSIEVHGGV 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G  ++  + + YR++    I  G+ N  ++ +   L
Sbjct: 353 GITKDYPVEKLYRDAKIGRIYEGTSNIQLMTIAKKL 388


>gi|54027425|ref|YP_121667.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018933|dbj|BAD60303.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 608

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 65/309 (21%)

Query: 193 KTSVAIGLG----LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF----- 243
           K +V  G G    LTE   G+D+ A  ++  K  DG + + G K F++S  SD       
Sbjct: 151 KIAVEQGWGATMVLTEPDAGSDVGAGRTKAIKQEDGSWHIEGVKRFITSADSDDLFPNIM 210

Query: 244 -IMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
            ++LA+ EG       +  F VP+   D      G  NG+    +++K+G + +AT E+ 
Sbjct: 211 HLVLARPEGAGPGTKGLSLFFVPKFHFDPETGELGERNGVFVTNVEHKMGLKVSATCEVT 270

Query: 291 FSN----TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           F        G+L+G+++         +E  ++++       +++ +      A+ YA+ R
Sbjct: 271 FGGHGVPAKGWLVGEVHNGIAQMFEVIEHARMMV----GTKAIATLSTGYLNALDYAKNR 326

Query: 343 HVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            V G  L                P ++R++A     +  A A   R    +  A    + 
Sbjct: 327 -VQGADLTQMTDKTAPRVTITHHPDVRRSLA-----MQKAYAEGLRAVYLYTAAHQDVDV 380

Query: 390 AAY---------ARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           AA          AR+   + PI K    + A   + E+++  GGSG++++  I ++ R++
Sbjct: 381 AAQVSGADADLAARVNDLLLPIVKGVGSERAYQYLTESLQTFGGSGFLQDYPIEQYIRDA 440

Query: 438 PANSILLGS 446
             +S+  G+
Sbjct: 441 KIDSLYEGT 449


>gi|332526806|ref|ZP_08402907.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332111208|gb|EGJ11240.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 383

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 41/270 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LG++E  GG+D+AA+ +   +   G Y ++G K W  +   +D   +LA           
Sbjct: 123 LGVSEPGGGSDVAAVKTTA-RAEGGDYVINGTKMWITNGLKADWCCLLANTS-------- 173

Query: 259 PRLLEDGSPN-------------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                DG P+             G+  Q+++ KIG  S+ T +L F N       +L   
Sbjct: 174 -----DGPPHRNKSLIVVPMDAPGITRQKIR-KIGMHSSDTAQLFFDNVR-VPRRNLIGQ 226

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE----AIHYARRRHVSGGILIDQPVMKRAIAD 361
            G     ++L + +  +   +    SL       I Y R+R   G  ++D  V+   +A+
Sbjct: 227 EGMGFTFQMLQFQEERLWGAASSLKSLDRLIDLTIDYTRQRQAFGKPILDNQVVHYRLAE 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL++R    +   +  +  A+ A++        C +++  V    ++  GG
Sbjct: 287 LRTEVEALRALTYRAVELYVAGQDVTRLASMAKLK-------CGRLSREVTDSCLQYWGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV 451
            GY  E  I++ +R+S   SI  G+   M+
Sbjct: 340 MGYTPENPISQAWRDSRLVSIGGGADEVML 369


>gi|312138525|ref|YP_004005861.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325676189|ref|ZP_08155869.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311887864|emb|CBH47176.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325552973|gb|EGD22655.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 18/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257
           +G+TE   G+D+A + +    + DG  + LSG K F+++  + D  ++ A+ +       
Sbjct: 125 IGMTEPSAGSDLANLKTSA--VRDGSDWILSGSKTFITNGYTADVVVVAARTDPTQRSKG 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   L D S  G    R  +K+G     T EL F         +LG+    TG V  M+ 
Sbjct: 183 ISLFLVDTSLPGFERGRKLDKVGQPEADTAELFFDEIRLPADAMLGE--PGTGFVSMMER 240

Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    + +A+ +V+  +  L E I YA+ R   G  +      K  +A++   I  A A 
Sbjct: 241 LPQERIGAAVTNVAHAKQILLETIEYAKERKAFGNSIGSFQHNKFLLAELVTKIEVAQAY 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                   D A +   ++  + + A   K+W  ++   V+   ++  GG G++ E  +AR
Sbjct: 301 -------IDAAVAEHSDSGLSAVDAAKAKWWSAQVQNEVLDHCVQLHGGYGFMREYRVAR 353

Query: 433 HYRESPANSILLGSGNAM 450
            + ++    I  GS   M
Sbjct: 354 AWMDARVTKIWAGSNEIM 371


>gi|284993184|ref|YP_003411739.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284066430|gb|ADB77368.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 614

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 167/362 (46%), Gaps = 72/362 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + L+G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTRAVRQDDGSWHLTGVKRFITSAEHDLSDNIVHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300
             +  F+VP+   D      G  NG+    ++ K+G + + T EL F +      G+L+G
Sbjct: 224 KGLSLFVVPKFHVDLLTGALGERNGVYVTNVERKMGLKVSTTCELTFGDGPVPAKGWLVG 283

Query: 301 DLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI----DQ 352
           +++         +E  ++ +   +     +G +V    A+ YA+ R + G  L     D 
Sbjct: 284 EVHDGIAQMFEVIEHARMFVGAKAIATLSAGYQV----ALDYAKNR-IQGADLTATGKDA 338

Query: 353 P--------------VMKRAIADIALDIAAATALSFRLANSFDEA--KSRSEEAAYA--- 393
           P              +++++ A+    +   TA +FR   +  EA   + SEEA  A   
Sbjct: 339 PRVPITRHPDVRRSLMLQKSYAEGMRALYLYTA-TFRDQVTEAEAAGTADSEEARLAARV 397

Query: 394 -RIMAPITKYWCCKMAPAVI-AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             ++ P+ K +  + A  ++ AE+++ +GGSGY+++  I ++ R+S  +++  G+  A+ 
Sbjct: 398 NDLLLPLVKGFGSERATQLLTAESLQTLGGSGYLQDYPIEQYIRDSKIDTLYEGT-TAI- 455

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
                   +G + F   F  + +D G +   +   ++D+I     + G  R   E+ ALA
Sbjct: 456 --------QGQDFF---FRKIVKDGGVALTWLAGRIQDTID---AEVGNGRLKEERAALA 501

Query: 512 SS 513
           ++
Sbjct: 502 TA 503


>gi|159900904|ref|YP_001547151.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893943|gb|ABX07023.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGC 255
           LTE   G+D A+IT+   +  D      G  W  +   +D  ++ A         G +  
Sbjct: 123 LTEPNAGSDAASITTTATQDGDDWIINGGKMWITNGSFADVIVVFASTNRERGARGGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+V +        G    +++ K+G R++ T  + F N       +LG++    G     
Sbjct: 183 FIVEKDFA-----GFKVGKVEEKMGLRASHTASIFFENCRVPAKNVLGEIGAGFGVAMKT 237

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +        ++   + +   A+HY+  R   G  + D   ++  +A++   I A   +
Sbjct: 238 LDIGRCGLGASALGSAKEAYDLALHYSVERQQFGRPIADFQAIQIKLAEMRTKIYAMEQM 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   D  K  + E++       + K +C + A  +I EA++  GG G+  E  + R
Sbjct: 298 VYHCAALVDAKKPATLESS-------MVKLFCTEAASQIIDEAIQIYGGMGFSREVPLER 350

Query: 433 HYRESPANSILLGS 446
            YR++    I  G+
Sbjct: 351 MYRDARVTRIFEGT 364


>gi|111019706|ref|YP_702678.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819236|gb|ABG94520.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 49/308 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +  +TT    + W PK  + E             +   + +TE  GG+D+A + +  
Sbjct: 97  APYLVTLTTEEQRQRWLPKFCTGE-------------LITAIAMTEPSGGSDLAGLKTTA 143

Query: 219 QKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             + DG  + ++G K F+++   +D  I+  +     G   +     D    G    R  
Sbjct: 144 --VKDGATWVINGSKTFITNGTQADLIIVATRTTREKGSKGITLFAVDADTAGFTRGRKL 201

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVS 331
           +K+G   + T EL F +       ++G+L+   G +  M +L    +  A+  ++  R  
Sbjct: 202 DKVGQPESDTAELFFEDVRVDDTAIIGELD--RGFIHMMNLLPQERISGAVAYLAHTRRI 259

Query: 332 LAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           L E + YA+ R   G           L+ + V K  +A   +D   A  ++  L  + D 
Sbjct: 260 LEETVTYAQDRKAFGKTIGSMQWNKFLLAELVTKLDVAQAHVDTCVAAHIAGEL-TAVDA 318

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           AK+               K+W   +   ++   ++  GG GY+ E  +AR ++++    I
Sbjct: 319 AKA---------------KWWSSTIQNDILDHCVQIHGGYGYMNEYRVARAWKDARVTKI 363

Query: 443 LLGSGNAM 450
             GS   M
Sbjct: 364 WAGSNEIM 371


>gi|333025649|ref|ZP_08453713.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332745501|gb|EGJ75942.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 608

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  + +DG + + G K F++
Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198

Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S    MS+  +  +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G +++ T E+ F +     G+L+GD +   G  +  +I+ +  +     +++ +      
Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316

Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378
           A+ YA+ R V G  L +              P ++R++           AL    A   +
Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375

Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           S    ++  E+AA       ++ PI K +  + +   +A++++  GGSGY++E  + ++ 
Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435

Query: 435 RESPANSILLGS 446
           R++  +++  G+
Sbjct: 436 RDAKIDTLYEGT 447


>gi|299770605|ref|YP_003732631.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700693|gb|ADI91258.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 390

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L + S  G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLVEKSMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G     K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|118464122|ref|YP_882794.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165409|gb|ABK66306.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 386

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 48/317 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + +  ++AL T  +  + W PK  + E             +   + +TE   G
Sbjct: 93  GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------LITAIAMTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+ +   
Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLVVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313
            G    R  +KIG  +  T EL F++               F +L+ +L     P E + 
Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFTDVHVPAENLLGQEGMGFIYLMQNL-----PQERIS 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I      A+M+ + M   L + + Y + R   G  +      +  +A++A +      + 
Sbjct: 253 I------AVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSRFVLAELATEATVVRMMV 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   + K  +E+AA A       K++  +    +I   ++  GG GY+ E  +AR 
Sbjct: 307 DEFVRLHLDHKLTAEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYPVARA 359

Query: 434 YRESPANSILLGSGNAM 450
           Y ++   +I  G+   M
Sbjct: 360 YLDARVQTIYGGTTEIM 376


>gi|240171384|ref|ZP_04750043.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium kansasii ATCC 12478]
          Length = 609

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 47/296 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAVEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G  NG+    L++K+G +S+ T EL F  T     G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLEHKMGLKSSPTCELTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ YA+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSTGTLSTGYLNALAYAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D A ++    A          ++ 
Sbjct: 341 PRVTIMRHPDIRRSLMTQKAYAEGLRALYLYAAAHQDNAVAQHVSGADPDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           P+ K    + A  V+ E+++ +GGSG++ +  I ++ R++  +S+  G+     LD
Sbjct: 401 PVVKGVGSERAYEVLTESLQTLGGSGFLTDYPIEQYIRDAKIDSLYEGTTAIQALD 456


>gi|226323698|ref|ZP_03799216.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758]
 gi|225207882|gb|EEG90236.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758]
          Length = 383

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252
            GLTE   GTD  A   Q + + DG  + L+G K F+++   +D +I++A     +  GR
Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIIIAVTGIVEKRGR 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
               +   ++E  +P G  +   + K+G R ++T EL F +     +   N+     +  
Sbjct: 181 KMKEISAFIVEKDTP-GFTFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGAQGKGF 236

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I ++ LD   + ++   + +AE      I Y + R   G  +      +  +AD+A  +
Sbjct: 237 GIAMHTLDGGRIGIAAQALGIAEGALDRTIAYVKERKQFGRTIGQFQNTQFQLADMATKV 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + ++ A +    K  S EAA A++       +  ++A  V  +A++  GG GYI 
Sbjct: 297 EAAKMMVYKAAMAKATQKVYSVEAAQAKL-------YAAEVAMEVTTKAVQLHGGYGYIR 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 350 EYDVERMMRDAKITEIYEGT 369


>gi|289937513|ref|YP_003482115.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289533204|gb|ADD07553.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 140/300 (46%), Gaps = 41/300 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           +M+       + ++W PK+ S +             VA    ++E   G+++A I +  +
Sbjct: 95  NMIVEFGDEWMKEEWLPKVASGD-------------VASCSMISEPAHGSNVAGIETVAE 141

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GR----VGCFLVPRLLEDGSPNGLCYQ 273
           K  D  Y L+G+K W  +  ++D  +++A+   G     +  FL+P        +G+  +
Sbjct: 142 KDGDE-YILNGNKMWITNGTVADVGVVMAKTTPGERHRGITAFLLPM-----DTDGVLTE 195

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVS 331
           ++ NK+G R++   E+   +     + + NV  G V++   +++ +  S   +V+   + 
Sbjct: 196 KIDNKLGIRASDLAEVVIDDA---RVPEENV-IGEVDNGFYQLMEFFASGRTNVAAQAIG 251

Query: 332 -----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L  AI YA  R   G  + +   ++  +A++A  + AA +L++R A   +  ++ 
Sbjct: 252 AAQGALDAAIDYAGEREQFGQKIGEFQAIEHKLAEMATRVEAARSLTYRAATEVE--QNN 309

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + AA    MA   K +  ++A  V  E ++  GGSGY+ +    R+YR++    I  G+
Sbjct: 310 QDVAAQFSSMA---KLFASEIAVEVADEGVQVHGGSGYVTDYPAERYYRDARITKIYEGT 366


>gi|187919810|ref|YP_001888841.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718248|gb|ACD19471.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 26/246 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVGCFL 257
           LTE   G+D A++ +  ++  D  Y L+G K F+S    + +  AF +  +  G+ G   
Sbjct: 128 LTEPHAGSDTASLRASARREGDH-YVLNGTKQFISNGSEAGVGIAFAITDKAAGKRGA-- 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
               + D +  G    R+++K+G  +  T ++          N  G            V 
Sbjct: 185 -STFIIDPNAPGYSVTRIESKLGQHTAHTAQIALEGYRVPAENLLGLEGDGYRTVMAGVS 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D +I I    A +S    R +L  A+ YAR R   GG L     +   +AD+A  +  A 
Sbjct: 244 DGRIGI----AFISAGVARGALDAAVKYAREREAYGGPLTKLQAVAFDLADMAAQVDVAW 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                 A   D      +EA+       I K +  ++A  V ++A++  GG GY+ +  +
Sbjct: 300 QYCLHAARLRDAGFDCIKEAS-------IAKLFASEIAEKVCSDALQIHGGYGYLTDFPV 352

Query: 431 ARHYRE 436
            R+ R+
Sbjct: 353 ERYLRD 358


>gi|293611428|ref|ZP_06693723.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826212|gb|EFF84582.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 387

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+A  T Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 127 LAITEPGGGSDVA--TLQTKAVRDGNYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 185 GISMLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 244 NMERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377


>gi|285017877|ref|YP_003375588.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73]
 gi|283473095|emb|CBA15600.1| hypothetical acyl-coa dehydrogenase protein [Xanthomonas
           albilineans]
          Length = 594

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 121/289 (41%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  +DG + +SG K F+++   D       ++LA++       
Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGTWSVSGTKIFITAGEHDLTENIVHLVLARLPDAPPGA 225

Query: 253 --VGCFLVP--RLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +   +VP  R+  DG     N L    L++K+G   +AT  + F    G+L+G  +  
Sbjct: 226 KGISLLVVPKYRVARDGRLGERNALRCGALEHKMGIHGSATCVMNFDGAQGYLIGPPHKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353
              +  M     L   +  +     +   A+ YAR R     +SG    ++P        
Sbjct: 286 LQAMFTMMNTARLGVGLQGLGLSERAYQNALRYARERLQSRSLSGAKQPEKPADPILVHP 345

Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                 +  +A+ + +  +A   A    +A+S  +   R +       + PI+K    + 
Sbjct: 346 DVRRMLLTVKALTEGSRLLALHAASLIDIAHSATDPAEREQADVLVSFLTPISKACQTEW 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A      A++C GG GYI E  + +  R++   ++  G+     LD++ 
Sbjct: 406 AVETTYHALQCFGGHGYIHEYGMEQLARDARITTLYEGTTGIQALDLIG 454


>gi|317404526|gb|EFV84934.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 382

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255
           LTE   G+D  A+    ++  D  Y L+G K +++ +P++  F ++A+   E R   + C
Sbjct: 124 LTEPDAGSDAMALRLSAERDGDH-YVLNGTKRYITNAPIAGLFSVMARTAPERRANSISC 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           FLV    E G+P GL   +   K+G     T ++ F N       LLG      G    M
Sbjct: 183 FLV----EAGTP-GLIIGKPDKKMGQAGALTSDVVFDNCRVPASALLGG-EEGNGFRTSM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   + +S + V +A+     A+ YA  R   G  + +  +++  IAD   ++ 
Sbjct: 237 RVL---DKGRLHISALCVGIADRLLRDAVKYATERKQFGQPIAEFQLIQAMIADSQAELY 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    A   D  ++ + +AA         K +  +M   V   A++  GG+GY+ E
Sbjct: 294 AARCMVLDAARLRDRGENTTMQAA-------CCKLYATEMVGRVADRAVQIHGGAGYMSE 346

Query: 428 RSIARHYRE 436
            ++ R YR+
Sbjct: 347 YAVERFYRD 355


>gi|239932480|ref|ZP_04689433.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440843|ref|ZP_06580233.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343738|gb|EFE70694.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D A++ ++  +  D  + ++G K W     ++D + ++A+   EG  G   F
Sbjct: 133 LSEPASGSDAASLRTRAVRDGD-HWVITGTKAWITHGGIADFYTVMARTGEEGPRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP     G   GL     + K+G + + T ++      G  + D        +   I L
Sbjct: 192 LVP-----GDAEGLSAAAPEKKMGMKGSPTAQVHLD---GVRVPDSRRLGEEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   V LA     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDGGRLGIAACAVGLAQAALDEALRYAAERRQFGRPIADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +  +++AA A       K  C   A  V  +A++ +GG GY  +   
Sbjct: 304 ALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDAVQILGGYGYTADFPA 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYLREAKVLQIVEGT 372


>gi|152985560|ref|YP_001348044.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960718|gb|ABR82743.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 375

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG- 254
             LTE + G+D + + ++ ++  D  Y L+G K F++S      +++  V     G+ G 
Sbjct: 121 FALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAVTDPEAGKRGI 179

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVST 306
             F+VP      +P G    R+++K+G  ++ T +L F++        LG+      ++ 
Sbjct: 180 SAFIVP----TDTP-GYEVVRVEDKLGQHASDTCQLAFNDLRIPASLRLGEEGEGYRIAL 234

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +E  +I I    A  +V   R +   A  YA  R   G  +I+   +   +AD+A  I
Sbjct: 235 ANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A A  +          A S  E        A + K +  +MA  V + A++ +GG GY++
Sbjct: 291 AVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAIQTLGGYGYLK 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   L
Sbjct: 344 DFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|224050691|ref|XP_002196781.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase
           [Taeniopygia guttata]
          Length = 487

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 44/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  +  K  D  + L+G+K W  + P +D  I+ A+ +        
Sbjct: 226 LAMSEPNAGSDVVSMKLKADKKGD-FFVLNGNKFWITNGPDADVLIVYAKTDMNAVPASQ 284

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304
            +  F+V R    G P     Q+L +K+G R + T EL F        N  G L   + V
Sbjct: 285 GITAFIVER----GMPGFRTAQKL-DKLGMRGSNTCELIFEDCKVPAENVLGTLSKGVYV 339

Query: 305 STGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                    ++  LD   + +SG     M+  L  AI Y   R   G  +    +M+  +
Sbjct: 340 ---------LMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKM 390

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + A     + +A + D+    +++ A   +       +  + A  V  + ++C+
Sbjct: 391 ADMYTRLMACRQYVYNVAKACDQGHFNAKDCAGVIL-------YSAECATQVALDGIQCL 443

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG+GYI +  + R  R++    I  G+G + V
Sbjct: 444 GGNGYINDYPMGRFLRDAKLYEI--GAGTSEV 473


>gi|219849259|ref|YP_002463692.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219543518|gb|ACL25256.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 389

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 37/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF--LV 258
           LTE   G+D A I +  ++  D  + L+G K W  +   +D  ++ A  +  +G    + 
Sbjct: 125 LTEPNAGSDAAHIQTSAERRGDE-WVLNGQKMWITNGSFADVIVVFAVSDKNLGARGGIT 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILI 316
             ++E   P G    ++++K+G R++ T  L F         D  V   P E++  ++ +
Sbjct: 184 AFIVEKTMP-GFRVGKIEDKMGLRASHTASLYFE--------DCRV---PAENVLGQVGM 231

Query: 317 YLDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAIADIAL 364
               A+ ++   R  L         EA   +R+    R+  G  + +   ++  +AD+A+
Sbjct: 232 GFPLAMRTLDIGRCGLGASSIGSAKEAFELSRKYMITRYQFGRPIAEFQALQFKLADMAV 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +     + +  A   D  +  + E++       I KY+C +MA  +I EA++  GG G+
Sbjct: 292 KLYTMEQIVYDCARRVDAGQQATLESS-------IVKYYCTEMASQIIDEAIQIHGGMGF 344

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + R YR++    I  G+
Sbjct: 345 SRELPLERMYRDARVTRIFEGT 366


>gi|23573437|gb|AAN38724.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 431

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 42/297 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T  +   W PK+ S E               IG + +TE   G+D+ ++ ++   + DG 
Sbjct: 156 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 199

Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+++   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R 
Sbjct: 200 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 259

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
             T EL F         LLG      G ++ M  L    L  A+ +V+ M ++L + + Y
Sbjct: 260 QDTSELFFDEVRVPRSHLLGQAE-GQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 318

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393
            R R   G  +      K  +A+ A +   A       +   LA   D            
Sbjct: 319 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQ---------- 368

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + K+W  + A  V+ + M+  GG GY+ E  I+R + +     I  G+   M
Sbjct: 369 --TVAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 423


>gi|23099848|ref|NP_693314.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778079|dbj|BAC14349.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 594

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 35/313 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT-SVAIGLGLTEKRGGTD-IA 212
           SVT  + V + + P V        F  +    N  P   T  +     LTE   G+D + 
Sbjct: 109 SVTHGAHVGIGSLPIV-------FFGNDEQKENYLPKLATGELLAAYALTEPSSGSDALG 161

Query: 213 AITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
           A T+     +   Y L+G K W  +S  +D FI+ A+++G     F+V R      P G+
Sbjct: 162 AKTTAKLNDAGTHYILNGEKQWITNSAFADVFIVYAKIDGEHFTAFIVEREF----P-GV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G +S++T  L   +       LLG+     G V    IL       A+  V
Sbjct: 217 STGPEEKKMGIKSSSTRTLVLEDAEVPIENLLGE--KGRGHVIAFNILNVGRYKLAVGGV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF----- 380
            G + ++  A  Y   R      +    + K  +A +A  I A  +  +R    F     
Sbjct: 275 GGSKRAIELAAKYTNERKQFNTPISSFNLTKEKLATMAAGIYANESSVYRTVGLFEQRMG 334

Query: 381 ---DEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              DE      E A +    +I   +TKY   ++   V+ EA++  GG G+++E  + R 
Sbjct: 335 ALTDEQLKDGREVARSIAEYQIECSMTKYMATELLDYVVDEAVQMHGGYGFMQEYEVERA 394

Query: 434 YRESPANSILLGS 446
           YR+S  N I  G+
Sbjct: 395 YRDSRINRIFEGT 407


>gi|66810674|ref|XP_639044.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4]
 gi|74854645|sp|Q54R47|GCDH_DICDI RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|60467671|gb|EAL65690.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4]
          Length = 420

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 26/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D A + ++  K S G Y L+G K W  +SP++D F++ A+VE G +  F+
Sbjct: 164 FGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVENGDIRGFV 223

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
           + + ++     GL   +++ K+  R++ T       VE+  +  F  + G      GP  
Sbjct: 224 LEKGMK-----GLSAPKIEGKLSLRASITGMIVMEDVEVPPTAMFPEVKG----LRGPFS 274

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +    Y      S+       + A  Y   R   G  L    + ++ +AD+A +I+   
Sbjct: 275 CLNKARY-GIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAANQLYQKKLADMATEISLGL 333

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              +++    D  K+  E  +       + K   C  +  +  ++ + +GG+G  +E  +
Sbjct: 334 QACYQVGRLIDAGKATPERIS-------LIKRNSCGKSLDIARQSRDMLGGNGIADEYHV 386

Query: 431 ARH 433
            RH
Sbjct: 387 IRH 389


>gi|326796145|ref|YP_004313965.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
 gi|326546909|gb|ADZ92129.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
          Length = 600

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 135/338 (39%), Gaps = 55/338 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  + ++ +  SDG Y +SG K F+S+   D       I+LA++       
Sbjct: 165 LTEPHCGTDLGMLKTKAEPNSDGSYAISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224

Query: 253 --VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+  + E G     N +    +++K+G   NAT  + F    GFL+G  N  
Sbjct: 225 KGISLFIVPKFNVNETGDVADRNAVSCGSIEHKMGIHGNATCVMNFDGAKGFLIGPPNRG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQP 353
              +        L +A+  ++    +   ++ YA+     R +SG          +I  P
Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEWAYQNSVVYAKDRLQMRALSGAKSPDKAADPIIVHP 344

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-----EAAYARIMAPITKYWCCKMA 408
            ++R +           AL    +   D+    S+           ++ PI K +  +  
Sbjct: 345 DVRRMLLTQRAFAEGGRALIHYSSLLVDKTTKGSDEEKAEAEELLSLLTPIAKAFLTETG 404

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF 465
                + ++  GG G+I E  + ++ R+S  + +  G+     LD+L    L+ +G  L 
Sbjct: 405 FESANQGLQVFGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGATL- 463

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                          ++   I+      CKE KG  RF
Sbjct: 464 ---------------RRFTKIIH---KFCKEHKGDKRF 483


>gi|325527857|gb|EGD05120.1| acyl CoA dehydrogenase oxidoreductase protein [Burkholderia sp.
           TJI49]
          Length = 379

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLV 258
             LTE + G++ A +T+Q  +  DG Y + G K F+S+  +  FI++ A+    +G   +
Sbjct: 124 FALTEPQAGSNPAGMTTQAVRDGDG-YRIHGVKHFISNADAAQFIVVYAKTAPELGTRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDM 312
              + D    G+     +  +G       E+ F      SN  G         +G    M
Sbjct: 183 SAFVVDRDTPGVSVSAPEKLMGIHGAPAHEVAFDCVVPASNRLG------EEGSGFRTAM 236

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+L    LD A  S+     +L +AI +A++RHV G  L ++  ++   AD+   + AA 
Sbjct: 237 KVLDNSRLDVAATSLGIAEAALGDAIDWAKQRHVGGEPLANKQGLQWRFADMKTQLEAAW 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+        +A +R         +A + K +  +M   V   A++  GG G+  E  I
Sbjct: 297 LLTL-------QAAARRAAGEPFTDLASMAKLYASEMVAFVTDAALQVHGGYGFTREMRI 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  GS
Sbjct: 350 ERLVRDARILRIYEGS 365


>gi|221114736|ref|XP_002158662.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 423

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           + +A   T    + + PK+ S E             V   L ++E   G+D+ ++  +  
Sbjct: 135 NQIARNGTKNQKEKYLPKLISGE-------------VFGSLAMSEVGSGSDVVSMKLRAD 181

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
           +  +  Y L+G+K W  + P S+ F++ A+           + CF++ R ++     G  
Sbjct: 182 RDGND-YILNGNKFWITNGPDSETFVVYAKTVSDKEKAARGITCFIIERGMK-----GFS 235

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
                +K+G R + T EL F N       +LG+LN      + + +L   LD   + +SG
Sbjct: 236 TMPKLDKLGMRGSNTCELVFDNCRVPAENILGELN------QGVYVLFSGLDIERLVLSG 289

Query: 328 MRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + + +A+      Y   R   G  +    +M+  +ADI + ++A+ +  + +A + D 
Sbjct: 290 GPLGIMQAVSDTVFPYVHARKQFGESVGHFQLMQAKLADIYVALSASRSYVYSVARAIDS 349

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++ A   + A        + A  V  + ++C+GG+GYI +    R  R++    I
Sbjct: 350 GHFNSKDCAGVILYAS-------EKATQVALQGIQCLGGNGYINDYPTGRFLRDAKLYEI 402

Query: 443 LLGS 446
             G+
Sbjct: 403 GAGT 406


>gi|157864298|ref|XP_001680859.1| acyl-coenzyme a dehydrogenase [Leishmania major strain Friedlin]
 gi|68124151|emb|CAJ02134.1| putative acyl-coenzyme a dehydrogenase [Leishmania major strain
           Friedlin]
          Length = 416

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 17/249 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  +++ + +LA+ EG    F+V  
Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-SNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              D    G+   + +  +G R + T  + F +           V  G    M++  +  
Sbjct: 221 ---DADTPGVSLGQKEVMLGQRCSDTRSIMFENVVVPEENVVGEVGKGFQVAMRVFDFTR 277

Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           SA+ +S  G+ R +  EA  YAR R   G  +     +   +A++A  + A   +++R  
Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +  +  A+ A++MA         +A      A++  GG+GY     + + YR+ 
Sbjct: 338 WETDQGRRNTYYASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390

Query: 438 PANSILLGS 446
              SI  G+
Sbjct: 391 KIFSIYEGT 399


>gi|170737680|ref|YP_001778940.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819868|gb|ACA94450.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 377

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A+ I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|56697631|ref|YP_168001.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56679368|gb|AAV96034.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 387

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L + S  G    +  +K+G R + T EL F +    F  +LG        + +G   
Sbjct: 187 TAFLIEKSMKGFSTSKHFDKMGMRGSNTAELVFEDVEVPFENVLGQEGRGVAVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGKPIGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYIYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLS 350

Query: 427 ERSIARHYRESPANSILLGS 446
           + +++R +R++    I  G+
Sbjct: 351 DSAVSRIFRDAKLMEIGAGT 370


>gi|115359133|ref|YP_776271.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115284421|gb|ABI89937.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 377

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A  I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|54027305|ref|YP_121547.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018813|dbj|BAD60183.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 384

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 12/241 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K +++S     F++ A   G  G   + 
Sbjct: 126 LAITEPGGGSDVGHLTTTARRDGDH-YIVNGAKTYITSGCRADFVVTAVRTGGPGSAGIS 184

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G R++ T EL + +       L+G  N  +  +    +  
Sbjct: 185 LLVVEKDTPGFTVSRKLDKMGWRASDTAELSYVDVRVPVENLVGQENSGSYQIAAAFVSE 244

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A+ + +  +  L   + + R R   G  LI +  ++  + ++A  I  A   +  +
Sbjct: 245 RVGLAVQAYAQAQRCLDLTLEWVRNRETFGRPLISRQAVQNTVTEMARRIDVARVYTREV 304

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A    E ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 305 ARRSAEGETDLIAEVCFAKNTAVEAAEW-------VAHQAVQLFGGLGYMRESEVERQYR 357

Query: 436 E 436
           +
Sbjct: 358 D 358


>gi|167628208|ref|YP_001678707.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167590948|gb|ABZ82696.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 581

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 47/356 (13%)

Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238
           N+   Q+   A+G G       LTE   G+D     ++  +  DG  Y L+G K ++++ 
Sbjct: 124 NEEQKQRYLPALGSGEKIAAYCLTEPGSGSDALGAKTKAIRSEDGRHYILNGTKQYITNA 183

Query: 239 -MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNT 294
             +D FI+ A+V+G +   F+V R     +P GL     + K+G + ++T  V LE +  
Sbjct: 184 GFADVFIVYAKVDGDKFTAFIVDR----DTP-GLSIGPEEKKMGIKGSSTCPVILEDAKV 238

Query: 295 FGF-LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG++        ++  +         +   + +L  +  YA  R      +   P
Sbjct: 239 PAKNLLGEIGKGHHIAFNILNIGRFKLGAGCIGSAKWALHLSAKYANARVQFNSPIAHFP 298

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----EAAYARIMAPITKYWCCKMAP 409
           +++  IA++A+++  A ++ +R A   ++A    E     A YA +   I K    +M  
Sbjct: 299 LIQEKIANMAIELYGAESVIYRTAGLIEKALEVKEPLQATAEYA-VECSICKILASEMLD 357

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA---MVLDVL---------NL 457
            V  E ++  GG GY +E  I R YR++  N I  G+      ++ D L          L
Sbjct: 358 LVADEGVQIHGGYGYTQEYEIERIYRDARINRIFEGTNEINRLLIPDTLLKRAMKGEIPL 417

Query: 458 LEKGTNLFEQLFS-----------TLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           L     L  +LFS            +E+DL    KK++  +   I++ K  K LA+
Sbjct: 418 LAAAQRLQSELFSLGIHADNGMPLNIEEDLIERSKKIVLFVA-GIAVQKYQKALAQ 472


>gi|118473149|ref|YP_888359.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174436|gb|ABK75332.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 399

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 16/270 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D ++ T+       G Y ++G KWF++   ++D  I+LA +E      + 
Sbjct: 121 VAISEAGAGSDFSSATTTATPDGKGGYIINGQKWFVTVGDVADFLIVLAYIEPEHAPTM- 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVED 311
              L D +  G+    +            E  F++         G +   L ++     +
Sbjct: 180 --FLIDVATPGVKITDVPRYTHTFVYEHPEFTFTDVHVGPEAVLGGVGAGLELTRDWFTE 237

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +++I       ++     +L  A+ +A+ R   G  LI++ +++  IAD  +DI    A
Sbjct: 238 ERLMI----GARTIGAAERALTLAVEWAKDRVQGGQPLINRQLIQGMIADSVVDITTNRA 293

Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + ++A  FD A  + +++       A   K    + +  V+   ++  GG GYI +  +
Sbjct: 294 YTHQVAWEFDHADPTNADQRKTLHAKAATVKLAASEASNRVVDRCVQIFGGRGYIRDYPV 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R +RE   + I  G+     L + N   K
Sbjct: 354 ERLWRELRVDRIWEGTSEIQRLVIANETNK 383


>gi|313219987|emb|CBY30852.1| unnamed protein product [Oikopleura dioica]
          Length = 408

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 27/268 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGR 252
           GL +TE   G+D+ ++ +   K  D  Y ++G+K W  + P++D  ++ A+      +GR
Sbjct: 147 GLAMTELNAGSDVMSMKTNAVKKGD-FYVINGNKFWITNGPVADHIVLYAKTNPSSNDGR 205

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
            +  F++     D    G   Q +  K+G R + T +L F N        L G+ + +  
Sbjct: 206 SITAFII-----DTKTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAV 260

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  + I   L +AI  V   + ++  A  YA  R      + +  +++  +AD+   ++
Sbjct: 261 LMSGLNIERILAAAI-PVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLS 319

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  +  + +A   D+ +  + + A   +       +C + A  +  +A++ +GG+G+I +
Sbjct: 320 ACRSYLYNVARHADKNEPTNHDCAGLVL-------YCAEKATQICLDAIQILGGNGFIND 372

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
               R+ R++    I  G+G + V  V+
Sbjct: 373 YPTGRYLRDAKLWEI--GAGTSEVRRVI 398


>gi|77460169|ref|YP_349676.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77384172|gb|ABA75685.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 385

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 14/264 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHINK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++   +  G+      +K+G RS+ T ++ F N        +    G    M++L + 
Sbjct: 182 SLIMVPMNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIG-HEGAGFMMQMLQFQ 240

Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +      + G+   +   I Y + R   G  LID  V+   +A++  +I    AL +
Sbjct: 241 EERLFGAANMIKGLEYCVDSTIEYCKERKTFGNALIDNQVIHFRLAELQTEIECLRALVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  +AR Y
Sbjct: 301 QATEQYVKGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVARAY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+    SI  G+   M+  +  L+
Sbjct: 354 RDVRLVSIGGGADEIMLGIICKLM 377


>gi|109896646|ref|YP_659901.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109698927|gb|ABG38847.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 391

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 132/286 (46%), Gaps = 26/286 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     +   +G++E   G+D+A + +  +   D  Y ++G K W  ++  +D   +LA
Sbjct: 119 APAVAGDMVACIGVSEPGAGSDVAGLKTTAKSDGDD-YVINGSKMWITNATQADWICLLA 177

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
              +G V       ++   +P G+   +  NK+G R++ T ++ F+N        +G+ N
Sbjct: 178 NTSDGNVHANKSLIVVPLNTP-GIEISKPLNKLGMRASDTGQIFFNNVRVPKRNRIGEEN 236

Query: 304 VSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                   M+++ + +  + + +    GM   + + I + + RH  G  +++  V+   +
Sbjct: 237 KGF----TMQMMQFQEERMYAAASAHKGMERMIQDTIGWCKERHTFGQPVLNNQVVHFKL 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++ A  AL++R      +     E+A Y   +A + K    ++   V    ++  
Sbjct: 293 AELQTEVEALRALTWRACQQHIDG----EDATY---LASMAKLKSGRLWREVTDSCLQYW 345

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG G++ +  +AR YR++   SI  GS   M    L ++ K  ++F
Sbjct: 346 GGMGFMWDNPVARAYRDTRILSIAGGSDEMM----LGIIAKHMDIF 387


>gi|271962563|ref|YP_003336759.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270505738|gb|ACZ84016.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 381

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 35/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D+  I +   +  D  Y L+G K F+++ + SD  +++A+ +   G    
Sbjct: 124 VGMTEPGAGSDLQGIRTTAVREGDH-YVLNGQKTFITNGINSDLVVVVAKTDPAAGARGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303
             L+ +    G    R   KIG  +  T EL F N                F  L+G+L 
Sbjct: 183 SLLVVERGMEGFSRGRNLEKIGMHAQDTAELFFDNVRVPAANLLGEEEGQGFFQLMGNL- 241

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + I      A+M+V+     L   I Y + R   G  +      +  +A++ 
Sbjct: 242 ----PQERLSI------AVMAVAAAETVLQTTIEYCKNRKAFGRNIGSFQNTRFVLAELD 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++  A     +   + +  +    +AA A       K+W  ++   VI   ++  GG G
Sbjct: 292 TEVEIARHYVDKCIRALNAKELSVVDAAKA-------KWWTTELQTKVIDRCLQLHGGYG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  +A+ + +S   +I  G+   M
Sbjct: 345 YMMEYPVAKAWVDSRVQTIYGGTTEIM 371


>gi|194751756|ref|XP_001958191.1| GF10801 [Drosophila ananassae]
 gi|190625473|gb|EDV40997.1| GF10801 [Drosophila ananassae]
          Length = 415

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 155 FALTEPGAGSDAFSLKTVAKK--DGKDYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  + F N          TFG        + G
Sbjct: 213 ITTFIVDRDTPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 269

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 270 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGEAIYNFQSMQHQIATV 320

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       KY+  ++A     + ++ +GG 
Sbjct: 321 ATEIDAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAAIKCVDWMGGV 373

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 374 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 411


>gi|187251889|ref|YP_001876371.1| acyl-CoA dehydrogenase domain-containing protein [Elusimicrobium
           minutum Pei191]
 gi|186972049|gb|ACC99034.1| Acyl-CoA dehydrogenase domain protein [Elusimicrobium minutum
           Pei191]
          Length = 547

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDGI---YCLSGHK-WFLSSPMSDAFI 244
           + K  + +  G TE   G+D+ ++ ++ + +   DG    Y ++G K W  +  ++D + 
Sbjct: 117 IAKEQLLVAYGATEADAGSDLVSLRTRAEHVLNPDGTLKGYKITGSKMWISNGGVADIYT 176

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           +LA   G    F+V    E  +P G      ++K G R + T  L F + +     L+G 
Sbjct: 177 VLAIAPGGPSWFIV----EKNTP-GFTSDAHEDKHGIRLSNTAGLSFDDVYVPVENLIG- 230

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-QPVMKRA 358
           L    G ++   +  Y  L  A   +     +   AIHYA++R  +GG L+D Q  M + 
Sbjct: 231 LKEGQGLLQAQAVFGYTRLMVAAFGLGAGEEATETAIHYAQQRIQAGGPLVDKQGYMLKL 290

Query: 359 IADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           I    +   AA A     A   D+     + E A       I KY+  +        A++
Sbjct: 291 ITPHYIRFEAARAFIDNTAKMLDDNNHGFATEGA-------IAKYYATEEGNNAAEHAIQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +GG GY +E S+ +  R+     I  G+   M + +
Sbjct: 344 ALGGFGYTKEFSVEKIKRDVKITMIYEGTNEVMEMTI 380


>gi|108800151|ref|YP_640348.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869279|ref|YP_939231.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126435776|ref|YP_001071467.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|296165239|ref|ZP_06847786.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|108770570|gb|ABG09292.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695368|gb|ABL92441.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126235576|gb|ABN98976.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
 gi|295899428|gb|EFG78887.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 381

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 42/297 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T  +   W PK+ S E               IG + +TE   G+D+ ++ ++   + DG 
Sbjct: 106 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 149

Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+++   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R 
Sbjct: 150 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 209

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
             T EL F         LLG  +   G ++ M  L    L  A+ +V+ M ++L + + Y
Sbjct: 210 QDTSELFFDEVRVPRSHLLGQ-SEGQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393
            R R   G  +      K  +A+ A +   A       +   LA   D            
Sbjct: 269 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQT--------- 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + K+W  + A  V+ + M+  GG GY+ E  I+R + +     I  G+   M
Sbjct: 320 ---VAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373


>gi|329898468|ref|ZP_08272409.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328920820|gb|EGG28269.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 399

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D   + ++ + +  G Y LSG K W  +
Sbjct: 121 FGTEEQREKYLPKLATGEWIGCFGLTEPDYGSDPGGMITRARSVEGG-YRLSGAKMWISN 179

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  +G++  F    +LE G P GL   +++ K+  R++ T E+   + F
Sbjct: 180 SPIADVFVVWAKTDDGQIRGF----ILEKGMP-GLSAPKIEGKLALRASITGEIVMEDVF 234

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LL ++    GP   + +  Y   A  ++         A  Y   R   G  L   
Sbjct: 235 VSEEQLLPNVKGLKGPFSCLNMARY-GIAWGALGAAETCWQTARAYTLERSQFGRPLAAN 293

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  +AD+  DIA        L   F   +   ++     +++ I +  C K A  + 
Sbjct: 294 QLIQLKLADMQTDIALG------LQGCFRAGQQLCDDGIAPELISLIKRNSCAK-ALHIA 346

Query: 413 AEAMECIGGSGYIEERSIARH 433
            +A + +GG+G  ++  + RH
Sbjct: 347 RQARDMLGGNGISDQYPVMRH 367


>gi|170700791|ref|ZP_02891783.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170134318|gb|EDT02654.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 377

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A  I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|83648022|ref|YP_436457.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636065|gb|ABC32032.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 596

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 34/289 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +   DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEPHSGTDLGIIRTKAEPNGDGSYAITGTKIFITGGEHDLSENIIHLVLAKLPDAPAGS 225

Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FL P  ++ E+G     N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 RGISLFLAPKFKVTEEGGVGERNPVFCGSIEHKMGIKASATCVMNFDGAQGWLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353
              +  M     L   +  ++    S   A+ YA+     R  +G +  D+        P
Sbjct: 286 LACMFTMMNYERLGVGVQGLAAAERSYQNAVEYAKDRIQGRSATGVVAKDKAADPIIVHP 345

Query: 354 VMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +   I  + A S  +A         D+A ++    A   ++ P+ K +    
Sbjct: 346 DVRRMLMTMRALIEGSRAFSTYVAKYLDISKYSDDATAKQHAEAMVALLTPVAKAFLTDR 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +  GG GYI E    +  R+     I  G+     LD++ 
Sbjct: 406 GLDSTVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMG 454


>gi|332286282|ref|YP_004418193.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330430235|gb|AEC21569.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 392

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + QK  D  Y L+G+K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRAQKKGD-RYVLNGNKMWITNGPDADTLVVYAKTDPEAKQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 187 TAFIIEKGYKGFSIAQKLDKLGMRGSHTGELVFQDCEVPEENILGELN---GGVKVLMSG 243

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERAVLAGGPLGIMQGVMDVVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQASRAF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D+  S           A I   +C + A  +  E ++ +GG+GYI E    R
Sbjct: 304 CYAVGKNLDQLGSGHAREVRKDCAAVIL--YCAEKATWMAGEGIQILGGNGYINEYPTGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 LWRDAKLYEIGAGT 375


>gi|315040277|ref|XP_003169516.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
 gi|311346206|gb|EFR05409.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
          Length = 541

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 29/271 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 265 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GGPGM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 324 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 382

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 383 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 436

Query: 367 AAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAMECIG 420
            A+      L F+  N  ++A +     A A + A  T    +C + A  +        G
Sbjct: 437 EASFNWLENLVFQCQNMDEDAAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRG 496

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G      I R YR+  A +I  GS   M+
Sbjct: 497 GQG----GKIERLYRDVRAYAIPGGSEEIML 523


>gi|302545219|ref|ZP_07297561.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462837|gb|EFL25930.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 385

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 41/272 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  +   DG  Y L+G K F++   ++D  ++ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298
            G   +  L+ D +  G    R   K+G +++ T EL F++               FG+L
Sbjct: 184 RGGISI--LVVDTTSEGYAVGRKLEKLGLKTSDTAELSFTDVKVPVEDLLGEEGKAFGYL 241

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             +L     P E + I +    +  + S   V  A+A  Y + R V G  +      K  
Sbjct: 242 AHNL-----PQERLGIAV----SAYAQSAAAVEFAKA--YVQDREVFGKSVASFQNTKFT 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD   ++ A  A+  R   + D  +  + +AA A++       +  + A  VI + ++ 
Sbjct: 291 LADCKAEVDAMQAVVDRALEAHDAGELTAADAASAKL-------FTTEHAAVVIDKCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 344 HGGYGYMMEYPIARLYADTRVTRIYGGTSEVM 375


>gi|226954072|ref|ZP_03824536.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835197|gb|EEH67580.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 428

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 26/226 (11%)

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--- 278
           +G + ++G K  +     +D FI+ A+  G+   F+V            C + +  K   
Sbjct: 218 NGKFYITGEKTLVVLGDTADVFIVSAEWNGKPDIFVVQ-----------CDETIAIKANP 266

Query: 279 -IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +G ++  T  L+F+ T    LGD +       D+  L++   AI +   ++   A  I 
Sbjct: 267 AMGLKAAETATLQFNQTPALSLGDTDFDYTAFVDLGNLMWCAMAIGTCEAIK---AYCIK 323

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +  +  +   IAD+A++I A   L    A+  +  +    EA  AR++ 
Sbjct: 324 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLVLNAASLAEAGQPFHREAYLARLL- 382

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 383 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 422


>gi|224005380|ref|XP_002296341.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335]
 gi|209586373|gb|ACI65058.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335]
          Length = 378

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
            GL+E   G+D  A ++    +    + ++G K W  ++  S+A ++ A  +       +
Sbjct: 116 FGLSEPGNGSDAGAASTTAT-LDGEEWVINGTKAWITNAYESEAAVVFATTDKSLKHKGI 174

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP  L      G      ++K+G R+++T  L   N       L+G+L       +
Sbjct: 175 SAFVVPTNLP-----GFSLGAKEDKLGIRASSTANLIMENVRIPKSNLIGELG------Q 223

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + V+G  + +A A     + YA  R+  G  + +   ++  I+ + +
Sbjct: 224 GFKIAMQTLDGGRIGVAGQALGIASASIDCAVKYALERNAFGKPIAELQSIQNKISAMVV 283

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              +A  L++R A   D  +  + EAA A++ A      C         +A++ +GG GY
Sbjct: 284 ARDSARLLTWRAAQLKDNKERYTREAAMAKLAASEAATMCSH-------QAIQILGGMGY 336

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    RHYR++    I  G+
Sbjct: 337 VTEMPAERHYRDARITEIYEGT 358


>gi|182438562|ref|YP_001826281.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326779209|ref|ZP_08238474.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178467078|dbj|BAG21598.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326659542|gb|EGE44388.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 385

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 56/311 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K W PK  + E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLATGEQKKRWLPKFATGEE-------------MWALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQ 273
            DG  Y L+G K F++  + +D  I+ A+       + R G  L      D    G    
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPREDDRRFGISL---FAVDTKSEGYSVG 202

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAIMS---- 324
           R  +K+G + + T EL F         D+ V   PVED+     K   YL + + S    
Sbjct: 203 RKLDKLGLKVSDTAELAFV--------DVKV---PVEDLMGEENKGFGYLGTNLASERWG 251

Query: 325 -----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
                 +    ++  A  Y + R V G  +      K  +A    ++ AA A++ R   +
Sbjct: 252 IAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAQAVADRALEA 311

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + EAA A++       +C ++A  VI   ++  GG G++ E  IAR Y ++  
Sbjct: 312 LDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRV 364

Query: 440 NSILLGSGNAM 450
           N I  G+   M
Sbjct: 365 NRIYGGTSEVM 375


>gi|118464119|ref|YP_881045.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165406|gb|ABK66303.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 380

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 45/300 (15%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223
           +TT    + W PK  S EY              IG + ++E   G+D+A I +  +   D
Sbjct: 102 LTTEEQKERWLPKFTSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+S+ +    ++ A          G  L+  ++EDG  +G    R  +KI
Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-DGFTRGRKLDKI 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330
           G  S  T EL F +       L+G+LN      VS  P E + +  Y      ++   R 
Sbjct: 204 GQYSADTAELFFEDVRVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L     YA  R   G  +    V +  +A++   + AA A   +   S ++      +A
Sbjct: 258 ALELTKAYALERTAFGQPIGKFQVNRHFLAEMQTKLDAAQAYLDQCVLSVNDGTLSDADA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K+W  ++   +I   ++  GG GYI E  +AR +R++    +  G+   M
Sbjct: 318 AG-------LKWWTSEIQWEIIDRCLQLHGGYGYINEYEVARLWRDARVQRLYAGTTEIM 370


>gi|27377727|ref|NP_769256.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27350872|dbj|BAC47881.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 404

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++ +K+SDG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASITGEVVMDGVVVPEDALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE  +H AR+    R   G  L    ++++ +AD+  +IA
Sbjct: 256 --FGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFGKPLAATQLVQKKLADMETEIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K       +A  M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQGSLRVGRLMDEGK-------FAPEMISIMKRNNCGKALDIARVARDMHGGNGISIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|229488672|ref|ZP_04382538.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324176|gb|EEN89931.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 38/278 (13%)

Query: 195 SVAIG-----LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-- 246
           S+A G     + +TE   G+D+A I +  +   DG  Y L+G K F++  ++    ++  
Sbjct: 114 SIATGEKTLCIAMTEPGTGSDLAGIRTTAKLSEDGTHYVLNGAKTFITGAVNSELCVVVA 173

Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
                A+ + R G  L+  ++   +P G  Y R   K+G R++ T EL F++       L
Sbjct: 174 RTSAPAEDDRRFGLSLM--VVPTDAP-GFEYGRKLEKLGLRASDTSELSFTDVKVPVADL 230

Query: 299 LGDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           LG+ N          P E + I          V+  R ++  A  Y + R V G  +   
Sbjct: 231 LGEQNKGFSYLGQNLPRERLSI------GSRGVASARAAIEFAKAYVQERQVFGKPVAAF 284

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
              K  +A+ + ++ AA AL+ R     D  +  + +AA  RI     K +  ++A  VI
Sbjct: 285 QNTKFVLAECSAEVEAAQALADRGIELDDSGELTAADAA--RI-----KLFGTEVAARVI 337

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + ++  GG GY+ E  IAR Y ++  + I  G+   M
Sbjct: 338 DKCLQLHGGYGYMLEYPIARLYADTRVSRIYGGTSEVM 375


>gi|116049576|ref|YP_791620.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389995|ref|ZP_06879470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584797|gb|ABJ10812.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  + ++A+ +      G +
Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGQHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G   
Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI
Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345

Query: 426 EERSIARHYRE 436
            +  I R YR+
Sbjct: 346 GDYGIERFYRD 356


>gi|332716275|ref|YP_004443741.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325062960|gb|ADY66650.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 375

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 26/261 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVE---GRVG 254
           G  LTE + G+D + + ++ ++  D  Y + G K F++S  + D  I+ A  +   G+ G
Sbjct: 120 GFALTEPQAGSDASNLKTKARRDGD-RYIIDGAKQFITSGKNGDVIIVFAITDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R++ K+G  S+ T ++ F++    +  +L +        
Sbjct: 179 ITAFIVPT-----DTPGYEVIRIEEKLGLHSSDTCQIAFTDMA--VPAELRLGEEGQGYR 231

Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  L+   + +S   V +A+A       YAR R   G  +I+   +   +AD+A  I 
Sbjct: 232 IALANLEGGRIGISAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMATRIT 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L    A   +  +    EA+ A++ A        +MA  V ++A++  GG GY+ +
Sbjct: 292 AARQLVLHAAALKEAGEPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMAD 344

Query: 428 RSIARHYRESPANSILLGSGN 448
             + R YR+     I  G+ +
Sbjct: 345 YPVERIYRDVRICQIYEGTSD 365


>gi|163761193|ref|ZP_02168269.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
 gi|162281532|gb|EDQ31827.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
          Length = 399

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++  K +DG Y L G K W  +SP++D F++ A+ E   G  + 
Sbjct: 141 FGLTEPDAGSDPAGMKTRAIK-TDGGYVLRGSKMWISNSPIADVFVVWAKSEAH-GDKVR 198

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+   +       +L ++    GP       
Sbjct: 199 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDDVEVGEDAILPNIQGMGGP------F 251

Query: 316 IYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S G+  +  + +H AR+    RH     L    + ++ +AD+  +IA   
Sbjct: 252 GCLNRARYGISWGVMGAAEDCMHRARQYGLDRHQFNRPLAATQLFQKKLADMQTEIAMGL 311

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE +       +A  M  + K   C  A  +   A +  GG+G   E  +
Sbjct: 312 QSSLRVGRLFDEGR-------FAPEMISVVKRNNCGKALDIARMARDMHGGNGIQIEYHV 364

Query: 431 ARH 433
            RH
Sbjct: 365 MRH 367


>gi|153833157|ref|ZP_01985824.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01]
 gi|148870587|gb|EDL69495.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01]
          Length = 389

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + +   D  Y ++G+K W  + P +D  ++ A+ +   G    
Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDH-YLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F++ R  E     G  + +  +K+G R + T EL F +       +LG+LN     VE
Sbjct: 189 TAFIIEREFE-----GFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRG---VE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  + E + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AAKAYVYTVAAACDRGECTRKDAAGVIL-------YSAELATQMSLDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +  R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 YATGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|108802070|ref|YP_642267.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119871222|ref|YP_941174.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126438049|ref|YP_001073740.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108772489|gb|ABG11211.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119697311|gb|ABL94384.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126237849|gb|ABO01250.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 484

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 56/317 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P     WAP+ F    D    A          L ++E  GG+D+  + +  +
Sbjct: 120 SAIGQAASPEQMLQWAPECFGTPGDLKLAA----------LAISEPEGGSDVRNLRTTAR 169

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G   GL   
Sbjct: 170 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDQELGHRGQALFIVP-----GGTPGLELV 223

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309
           R  +K+G R++ T EL+F         LLG                       + + G  
Sbjct: 224 RKLDKMGCRASHTAELKFDGVRIPGDHLLGGEEKLEHKLAKAREAVEGARKSGSAALGTF 283

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  + ++    A  ++   R +L     YA RR   G  +ID   +   +AD+A  I AA
Sbjct: 284 EQTRPMV----AAQALGIARAALEYMTEYANRREAFGAPIIDNQGISFPLADLATQIDAA 339

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R   S+  A        + R    ++K    ++A      A++ +GG GYI +  
Sbjct: 340 RLLTWR--ASWMAATG----VPFERGEGSMSKLAASEVAVKATERAIQTMGGWGYITDHP 393

Query: 430 IARHYRESPANSILLGS 446
           + + YR++   +I  G+
Sbjct: 394 VEKWYRDAKLYTIFEGT 410


>gi|254239977|ref|ZP_04933299.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192]
 gi|126193355|gb|EAZ57418.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  + ++A+ +      G +
Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G   
Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI
Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345

Query: 426 EERSIARHYRE 436
            +  I R YR+
Sbjct: 346 GDYGIERFYRD 356


>gi|205375177|ref|ZP_03227968.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
          Length = 594

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S+T  + V + + P V       +F  +    N  P   T   +    LTE   G+D   
Sbjct: 109 SITHGAHVGIGSLPIV-------LFGNDNQKNNYLPALATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  ++  +D F++ A+++G +   F+V R        G+
Sbjct: 162 AKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEQFSAFIVEREFP-----GV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G +S++T  L   +       LLGD     G V    IL        + +V
Sbjct: 217 SVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGD--AGKGHVIAFNILNIGRYKLGVGAV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L     Y  +R      +    + K  ++ +A  + A+ +  +R    F+E  S
Sbjct: 275 GATKRALEVTAEYTNQRQQFKTPISSFNLTKEKLSTMAAKLYASESSVYRTVGLFEERMS 334

Query: 386 R--SEE-----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           R   EE           A YA I   + K++  ++   V+ E ++  GG G+++E  I R
Sbjct: 335 RLTDEEVRDGKEVAKSIAEYA-IECSLNKFFATEVLDYVVDEGVQLHGGYGFMQEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|299533479|ref|ZP_07046859.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718536|gb|EFI59513.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 385

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 44/314 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ S  ++A  T  +  + W P++ S E             +  G+ +TE   G+D+ A+
Sbjct: 96  TIASHYLLAYGTEEQKQR-WLPRLCSGE-------------LLAGIAMTEPSVGSDLKAM 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQ 273
            ++ Q+  +  Y ++G K F+++  +   +++A   G  G   V  + LE  +  G    
Sbjct: 142 RTRAQRDGEH-YVINGSKTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRVG 200

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R   KIG   + T EL F +       LLG      G  + M  L Y +  ++ VS    
Sbjct: 201 RRLGKIGQHISDTAELFFEDLRIPVSHLLGGTE-GQGFKQLMSQLPY-ERMLLGVSAAAA 258

Query: 331 SLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSFD 381
                   + Y ++R   G  + D    +  +A+ A    A    SF      RL +   
Sbjct: 259 IEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSFVNDCIQRLLDG-- 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   EAAY      + K+WC +    V+ E ++  GG GY+EE  IAR Y ++    
Sbjct: 315 ---TLDNEAAY------MAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQK 365

Query: 442 ILLGSGNAMVLDVL 455
           I  G  N ++ D++
Sbjct: 366 I-YGGANEIMKDLI 378


>gi|153836704|ref|ZP_01989371.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149750053|gb|EDM60798.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 389

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D I+ L+G+K W  + P +  +++ A+ +       +
Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G P     Q+L +K+G R + T EL F N       +LG+ N      +
Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGEEN------Q 237

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + ++G  + + +A     + Y   R   G  + +  +++  IAD+  
Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA A  + +A + D  ++  +++A A +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAAKAYVYAIAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372


>gi|118462334|ref|YP_884188.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118163621|gb|ABK64518.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 383

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 28/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCF 256
           L +TE   G+D+  + +   +  D  + L+G K F+SS  M+D  ++ A+ +  G  G F
Sbjct: 126 LAMTEPGAGSDLRGMRTTAHRDGDQ-WILNGQKTFISSGIMADVVVVAARTDPNGGSGAF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  ++E  +P G    R  +KIG  +  T EL F +       LLG +       E ++
Sbjct: 185 SLF-VVERDTP-GFERGRKLDKIGLPAQDTAELYFRDAQVPGANLLGTVG------EGLR 236

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            L+       L     S++  R      + Y ++R   GG L D+  ++  +A++A +I 
Sbjct: 237 YLMSHLPRERLGVTAKSLATTRAIFDTTVEYCQQRMAFGGPLTDKQHIRFELAEMATEID 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A A   +   +++  +  + +AA         K++  ++   VI   ++  GG GY+ E
Sbjct: 297 VAEAYVDKSVLAYNAGELTAVDAAKG-------KWYLSELQKRVIDRCLQLHGGYGYMTE 349

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             +AR Y ++   +I  G+   M
Sbjct: 350 YPVARAYLDTRIQTIYGGTTEIM 372


>gi|54024416|ref|YP_118658.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015924|dbj|BAD57294.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 596

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 49/312 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           PM +      + L+E + G+ +A I ++ +   DG Y L G K ++S    +       +
Sbjct: 152 PMVEGRFTGTMCLSEPQAGSSLADIVTRAEPQEDGTYRLFGSKMWISGGDHELTENIVHL 211

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF-- 291
           +LA++ G       +  F+VP+ L D     G+ N +    L +K+G R      L F  
Sbjct: 212 VLAKIPGGPAGTKGISLFVVPKYLVDADGSLGARNDVTLAGLNHKMGYRGTVNTVLNFGE 271

Query: 292 --------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                   +   G+L+G+    L+     + + ++ + L +  +  +G   SL     YA
Sbjct: 272 GRHTPGGAAGAVGYLVGEPHRGLSYMFHMMNEARLGVGLGATALGYTGYLKSL----RYA 327

Query: 340 RRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAK---- 384
           R R     +    P            +KR +      +  A AL        D A+    
Sbjct: 328 RERQQGRAVTAKDPATPQIPIIEHADVKRMLLAQKSYVEGALALLLYCNRLVDLARTDPA 387

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S  E      I+  + K W  +        A++  GG GY  E  + +HYR++  N I  
Sbjct: 388 SAREHTLLLEILTGVAKSWPSQWCLEANNLAIQVHGGYGYTREYDVEQHYRDNRLNPIHE 447

Query: 445 GSGNAMVLDVLN 456
           G+     +D+L 
Sbjct: 448 GTHGIQGMDLLG 459


>gi|194292476|ref|YP_002008383.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226380|emb|CAQ72329.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 398

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 46/313 (14%)

Query: 156 VTSASMVALMTTPRVHKDW----APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ AS+VA     R    W     P+   REY P     + +        L+E   G+D+
Sbjct: 72  MSVASIVA-----RAQGGWIMKSMPEEMRREYLPR----VVRGEFLNASALSEPDTGSDL 122

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPR 260
           A+I+ + +   D  + L+G+K W   +  +D  I+ A+           EG + CF++ +
Sbjct: 123 ASISCRAELDGDE-WVLTGNKYWCTFADGADYLIVFARTSAPPSPDKRWEG-ISCFMIEK 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--L 318
               G P G+    +  KIG     T EL      G  +   N+  GP     +L+   L
Sbjct: 181 Q-RGGFPPGMTGSPIP-KIGYFGWKTFELALD---GVRVPKRNL-MGPEGKAFLLMAKGL 234

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + A    +   + LA+     A+ Y+  R   G  + +   ++  IA +A +I AA  L 
Sbjct: 235 EGARAHTAARAIGLAQGALEDAVAYSLERRQFGMPIAEYQAIRFKIATMATEIEAARQLL 294

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + + N  D  +   +EA+       + KY+  +MA  V ++A++  GG+GY +   + R+
Sbjct: 295 YFVCNEIDSGRRCDKEAS-------MVKYFASEMAERVTSQALQIFGGAGYTKLFPVERY 347

Query: 434 YRESPANSILLGS 446
           +R++    I  G+
Sbjct: 348 WRDARLTKIFEGT 360


>gi|169634306|ref|YP_001708042.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           SDF]
 gi|169153098|emb|CAP02168.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii]
          Length = 407

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + + DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     V   EA+ + ++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWVQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 324 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397


>gi|121604041|ref|YP_981370.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593010|gb|ABM36449.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 398

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 30/259 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A++ ++ + + DG Y L G K W  +SP++D F++ A
Sbjct: 123 PKLATGEWVGCFGLTEPNHGSDPASMLTRAKPV-DGGYILKGAKMWITNSPIADVFVVWA 181

Query: 248 QVE---GRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           ++E   G+VG     R  +LE G   GL   +++ K+  R++ T E+   + F     LL
Sbjct: 182 KLEDAGGKVGGQEAIRGFVLEKGM-KGLSAPKIEGKMSLRASITGEIVMDDVFVPSENLL 240

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----V 354
            +++   GP         L+ A   ++   +  AE   +  R++    +   +P     +
Sbjct: 241 PNVSGLKGP------FGCLNKARYGIAWGALGAAEDCWFRARQYTMDRVQFGRPLAQTQL 294

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ +AD+  +I        R+    DE ++  E       M  + K   C  +  +   
Sbjct: 295 IQKKLADMQTEITLGLQACLRVGRLMDEDRAVPE-------MISLIKRNSCGKSLDIARM 347

Query: 415 AMECIGGSGYIEERSIARH 433
           A +  GG+G  +E  + RH
Sbjct: 348 ARDMHGGNGIHDEYHVIRH 366


>gi|325281776|ref|YP_004254318.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324313585|gb|ADY34138.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 379

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +A  +      D  Y L+G K F++ +  +  +I++A  +   G   +
Sbjct: 123 FGLTEPNAGTDASAQQTMAVAEEDH-YVLNGSKIFITNAAYAHVYIVMAMTDKSQGTRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI- 314
              + +    G    + + K+G R +AT EL F N     G +LG       P E  KI 
Sbjct: 182 SAFIVERDFPGFSIGKKEKKMGIRGSATCELIFENCIVPKGNMLGK------PGEGFKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   M ++   + +A     E I Y + R   G  +      +  +AD+   I AA
Sbjct: 236 MKTLDGGRMGIASQALGIAQGAMDETIKYVKERKQFGRSIGQFQNTQFQLADLNAKIEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D     S ++A A++ A  T       A  V  +A++  GG GY  E  
Sbjct: 296 RLLVRTAAWKKDRKIPYSVDSARAKLFAAET-------AMEVTTKAVQFHGGYGYTREYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITEIYEGT 365


>gi|319650927|ref|ZP_08005062.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397283|gb|EFV77986.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 402

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 35/275 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM +       GLTE   G+D   + +  +   D  Y L+G K F+++  ++D +++ A 
Sbjct: 113 PMAQGEKIGAYGLTEPGSGSDAGGMRTTARLEGD-HYVLNGSKIFITNGGIADIYVVFAL 171

Query: 249 VE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
            +          F+V    E     G    + + K+G RS+ T E+ F         +LG
Sbjct: 172 TDPASKHKGTTAFIVESGFE-----GFSVGKKEKKLGIRSSPTTEIIFEECKVPVENVLG 226

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           ++       E  KI ++ LD     ++   V +A+     ++ YA+ R   G  +  Q  
Sbjct: 227 NVG------EGFKIAMMTLDGGRNGIAAQAVGIAQGALDASVEYAKERQQFGKPIAAQQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I A+  L+++ A    E     +E+A ++++A  T       A  V  +
Sbjct: 281 IGFKLADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLLAGDT-------AMKVTTD 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS-GN 448
           A++  GG GY ++  + R  R++    I  G+ GN
Sbjct: 334 AVQIFGGYGYTKDYPVERFMRDAKITQIYEGTQGN 368


>gi|217423869|ref|ZP_03455369.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|217392932|gb|EEC32954.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
          Length = 378

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW   +   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYSGTNEIM 370


>gi|326203134|ref|ZP_08193000.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325986780|gb|EGD47610.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 383

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 23/264 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M K        L+E   G++   + +   K  D  Y L+G K W     ++D FI++A  
Sbjct: 112 MAKGEKLAAFALSEPDVGSNAKGVQTSYVKQGDK-YILNGRKKWITLGGIADVFIVIASE 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STG 307
           +G++  FLV R     S  G+    +K  +  +++   E++  N     + + NV    G
Sbjct: 171 QGKITAFLVER-----SFPGVSTSLIKGMLSGKASYISEIQLDNV---EVPEENVLGKVG 222

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
              +  +   LD    S++   V +A+      + Y+R R   G  L    +++  I D 
Sbjct: 223 NAFEYVVATALDHGRYSIAWAGVGIAQEALDAMVTYSRNRTQFGEKLRSFQLVRGMIGDA 282

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA AL  R        + R +  + A +   I KY+  K+A  V  +A++  GG+
Sbjct: 283 VTKIHAARALCIRA------GEMRQQRDSDAIVETTIAKYFTSKVAMEVANDAVQIHGGN 336

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G      + R +RE+    I+ G+
Sbjct: 337 GCCSGYPVERLFREARVLEIIEGT 360


>gi|300778441|ref|ZP_07088299.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503951|gb|EFK35091.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 392

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D  ++ +  + + D  Y L+G K W  +
Sbjct: 115 FGSEEQKKKYLPKLAAGEMIGSFGLTEPNHGSDPGSMETNFKDMGDH-YLLNGAKMWITN 173

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           SP+ D  ++ A+  EG+V   +V R +E     G       NK   R++ T EL F+N  
Sbjct: 174 SPLCDIAVVWAKNEEGKVQGLIVERGME-----GFTTPETHNKWSLRASKTGELVFNNVK 228

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347
                LL  +    GP      L  L+SA   +S   +  A      A+ Y++ R   G 
Sbjct: 229 VPKENLLPGVTGLKGP------LSCLNSARYGISWGVIGAAIDCYCTAVQYSKERKQFGK 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    + ++ +A+   +I  A  L  +L N  ++ K+   + + A       K    KM
Sbjct: 283 PIGSYQLQQKKLAEFLTEITKAQLLCLQLGNLKNDHKATPAQISMA-------KRNNVKM 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +  E+ + +GG G + E  + RH
Sbjct: 336 AIDIARESRQILGGMGIMGEFPMMRH 361


>gi|295836355|ref|ZP_06823288.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295825977|gb|EFG64589.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 606

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 51/324 (15%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           SRE   T   PM +      + L+E + G+ +A + ++ ++  DG Y L G+K ++S   
Sbjct: 150 SREQIDTYVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAERAGDGTYRLFGNKMWISGGD 209

Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            +       ++LA+  G       +  F+VP+ L D     G+ N +    L +K+G R 
Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDEEGGTGARNDVVLAGLNHKMGYRG 269

Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329
                L F              G L+G+ N     +  M    +I + L +  +  +G  
Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328

Query: 330 VSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLAN 378
                A+ YAR R     +           +I+   ++R +      +  A AL+     
Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATAQVPIIEHTDVRRMLLAQKSYVEGALALTLYCGR 385

Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             DE ++  E AA         I+ P+ K W  +      + A++  GG GY  E  + +
Sbjct: 386 LVDEQRTAPEPAAREAAGLLLDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
            YR++  N I  G+     LD+L 
Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469


>gi|15667238|gb|AAL02422.1| isovaleryl-CoA dehydrogenase [Frankia sp. EuIK1]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253
           + LTE  GG+D+ A+ + G + + G Y ++G K W  ++  S    ++ + +  V     
Sbjct: 121 MALTEPGGGSDLQAMRT-GARPAGGGYVINGSKTWITNARRSGLVALVCKTDPGVEPAHR 179

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFL 298
           G  ++  L+E G   G    R   K+G +   + EL F++                FG +
Sbjct: 180 GMSIL--LVEKGP--GFEVSRDLPKLGYKGVESCELSFTDCRVPREALLGGVEGRGFGQM 235

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +  L V             L  A  +    R +  +A+ YA+ R   G  +     +   
Sbjct: 236 MRGLEVGR-----------LQVAARATGVGRAAFDDALRYAQERESFGRPIWQHQSVGNH 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  L    A  +D  +    EA  A       KY+C ++A  V   A+  
Sbjct: 285 LADMATKLTAARQLLLHAARRYDTGERADLEAGMA-------KYFCSEVAMEVALSAIRV 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448
            GG GY  E  + R++R++P   +++G G 
Sbjct: 338 HGGYGYSTEFDVERYFRDAPL--MIVGEGT 365


>gi|15596828|ref|NP_250322.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107101063|ref|ZP_01364981.1| hypothetical protein PaerPA_01002093 [Pseudomonas aeruginosa PACS2]
 gi|254234731|ref|ZP_04928054.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719]
 gi|9947598|gb|AAG05020.1|AE004590_11 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126166662|gb|EAZ52173.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  + ++A+ +      G +
Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G   
Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI
Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345

Query: 426 EERSIARHYRE 436
            +  I R YR+
Sbjct: 346 GDYGIERFYRD 356


>gi|284028112|ref|YP_003378043.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283807405|gb|ADB29244.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 373

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 15/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A++ +  ++  D  + ++G K +++S     F+  A   G  G   + 
Sbjct: 116 LAITEPDGGSDVASLRTTARRDGD-HFVVNGAKTYITSGCRADFVTTAVRTGGPGAHGIS 174

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G P G    R   K+G   + T EL F+        L+G        +    + 
Sbjct: 175 LLVIERGMP-GFVVSRKLEKLGWLCSDTAELSFAEVRVPVENLVGAEGSGFVQLAQNFVA 233

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + +G + +L   + + R R   G  LI +  ++  + ++A  I  A      
Sbjct: 234 ERLTPAVQAYAGAQRALDLTVEWCRARETFGRPLISRQTVQHTLTEMARRIDVARVYVHD 293

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +    +       E  +A+  A     W C        +A++  GG GY+ E  + R YR
Sbjct: 294 VVRRAEAGDDVIAEVCFAKNTAVEAGQWVCD-------QALQLHGGFGYLREAEVERQYR 346

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + LG G   +L  L
Sbjct: 347 DQ--KILALGGGTTEILTGL 364


>gi|156976705|ref|YP_001447611.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116]
 gi|156528299|gb|ABU73384.1| hypothetical protein VIBHAR_05480 [Vibrio harveyi ATCC BAA-1116]
          Length = 389

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + +   D  Y ++G+K W  + P +D  ++ A+ +   G    
Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDH-YLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F++ R  E     G  + +  +K+G R + T EL F +       +LG+LN     VE
Sbjct: 189 TAFIIEREFE-----GFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRG---VE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  + E + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AAKAYVYTVAAACDRGECTRKDAAGVIL-------YSAELATQMSLDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +  R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 YATGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|83747055|ref|ZP_00944100.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|207738492|ref|YP_002256885.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726332|gb|EAP73465.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|206591860|emb|CAQ58766.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 400

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%)

Query: 190 PMQK----TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           P Q+    T VA G       L+E   G+D+AA+    +   DG Y L G K W  +  +
Sbjct: 111 PAQRERYLTQVARGEAIAAFALSEPDAGSDVAALACAARVDGDG-YVLDGEKTWISNGGI 169

Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT 294
           +D +++ A+     G   +   ++E G+P     +R+     + +         +  +  
Sbjct: 170 ADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPHPLARLRFTGCRIPAAQR 229

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       V+   ++  +  +    A  ++   R +L EA+  A  R +  G+L D  +
Sbjct: 230 VGAAGEGFKVAMRTLDVFRTSV----AAAALGFARRALDEALARATTRRMFNGVLADFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A +A  I +A  L++R A   D+ +S + EAA A++ A        + A  VI  
Sbjct: 286 TQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDA 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG G + E+ + R YRE  A  I  G+
Sbjct: 339 AVQMWGGLGVVSEQPVERLYREIRALRIYEGA 370


>gi|91978156|ref|YP_570815.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
 gi|91684612|gb|ABE40914.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
          Length = 390

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G+K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGM 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKGMKGFSTAQKLDKLGMRGSDTGELVFQDCEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  L   + Y   R   G  +    +++  +AD+ + + A+ A
Sbjct: 250 ERAVL----AAGPLGIMQACLDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILFAAEKATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|300790996|ref|YP_003771287.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299800510|gb|ADJ50885.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 611

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 60/329 (18%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA  +  R +  T             + LTE   G+D+ A  ++  K  DG + + G
Sbjct: 146 QKHWAQLMIDRAWGAT-------------MVLTEPDAGSDVGAGRTKATKQEDGSWHIDG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG----------RVGCFLVPRLLED------GSPNG 269
            K F++S   D       ++LA+ EG           +  FLVP+   D      G  NG
Sbjct: 193 VKRFITSAEHDMSENIMHLVLARPEGPGIETKPGTKGLSLFLVPKFHFDSKTGELGERNG 252

Query: 270 LCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY--LDSAIM 323
                +++K+G +++ T EL F        G+LLG+  V  G  +  +++ Y  +     
Sbjct: 253 AYVTNVEHKMGIKASTTCELTFGQHGTPAKGWLLGE--VHDGIAQMFQVIEYARMMVGTK 310

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAAT 370
           +++ +      A+ YA+ R V G  L +              P ++R++           
Sbjct: 311 AIATLSTGYLNALEYAKER-VQGADLPNMLNKAAPRVTITHHPDVRRSLMLQKAYAEGLR 369

Query: 371 ALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A+    A+  D+  +   +   A     ++ PI K    + A   + ++++ +GGSG+++
Sbjct: 370 AVYLYTASFQDQLWTGEGDQKLAHGVNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQ 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I ++ R++  +S+  G+     LD  
Sbjct: 430 DYPIEQYIRDAKIDSLYEGTTAIQSLDFF 458


>gi|325673563|ref|ZP_08153254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555584|gb|EGD25255.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258
           +G+TE   G+D+ AI +   +  D  Y ++G K F+++  S   I+LA + + + G   V
Sbjct: 126 IGMTEPGAGSDLKAIRTTAVRDGDH-YVVNGSKTFITNGSSADMIVLAVKTDPKAGARGV 184

Query: 259 PRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
             L+ D    P G    R+ +K+G  +  T EL F +       LLG+     G +    
Sbjct: 185 SLLIVDLRDCP-GFTVGRVLDKVGQHAADTSELSFVDVKVPVSNLLGEEGQGFGQLIAQL 243

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   L  A  +   M  ++ E + Y + R   G  L +         + A ++A    ++
Sbjct: 244 VQERLIIAAQASGAMNRAVEETVAYVKSRQAFGHSLFE-------FQNTAFELAECQTIA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D               A + KYW       V+   ++  GG GY+ E  +AR 
Sbjct: 297 RTCEVFLDHCIQEHLRGELDAAEAAMAKYWLTDKQCEVVDRCVQLHGGYGYMREYLVARM 356

Query: 434 YRESPANSILLGSGNAM 450
           Y ++    I  G+   M
Sbjct: 357 YEDARVQKIYAGANEVM 373


>gi|116327480|ref|YP_797200.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331906|ref|YP_801624.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120224|gb|ABJ78267.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125595|gb|ABJ76866.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 558

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 42/284 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+ +TE   G+D+A ++   ++ ++G + ++G K W   +  ++  ++L + E       
Sbjct: 279 GIMVTEPNYGSDVAGVSVTAKQ-TNGGWVINGVKTWCTFAGYANLLLVLCRTESD----- 332

Query: 258 VPRLLEDG-------------------SPNGLCYQ-RLKNKIGNRSNATVELEFSNTF-- 295
            P L   G                    P G   + +    IG R   + E+ F N F  
Sbjct: 333 -PSLKHKGLSILLAEKPSFTGHEFAYTQPEGGKIEGKAIGTIGYRGMHSFEVSFDNYFVP 391

Query: 296 --GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               L G+     G    M+      + +A  +   M+ +L  A+ YA+ R V    + +
Sbjct: 392 AENLLGGEAGRGKGFYFQMEGFAGGRIQTAARAHGVMQAALEAALRYAQDRSVFQKPIYE 451

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + K  IA +A+ + A+   +  +A+  D  + + E        A + K++  K+A  V
Sbjct: 452 YNLTKYKIAKMAVILQASRQFANHVASLLDNHQGQME--------ATLIKFYASKVAEWV 503

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             EAM+  GG GY EE +++R++ ++   SI  G+   M L V+
Sbjct: 504 TREAMQIHGGMGYAEEYAVSRYFVDARVFSIFEGAEEVMALRVI 547


>gi|108805284|ref|YP_645221.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
 gi|108766527|gb|ABG05409.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
          Length = 395

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 36/259 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AAI ++ +++  G Y +SGHK W  +  ++   I+ A+    V  F+VP 
Sbjct: 125 LTEPEAGSDAAAIEARAERVEGG-YRISGHKQWITNGRVAGTMILFARAPEGVTAFIVPM 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDMK 313
             E     G+   +   K+G  S  T ++     F       G     L V+ G      
Sbjct: 184 DAE-----GVSLGKHARKMGVISATTDDVLLDGVFVPEEDRLGEEGKGLRVALGT----- 233

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LD   + ++G  + +AE     A  +A RR   G  + +   +   +AD+ + I A
Sbjct: 234 ----LDPGRIGIAGQALGIAEAAFRCAAEHAVRRRAFGRPIAEHQAISFKLADMQVKIRA 289

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   D     +E  A A       K +  ++A  V  EA++ +GG GY+++ 
Sbjct: 290 ARLLAYEAAWMKDRGMRVTEAGARA-------KLYASQVANEVAYEAVQILGGRGYMKDE 342

Query: 429 S-IARHYRESPANSILLGS 446
           S + R YR++    I  G+
Sbjct: 343 SPVERLYRDARVTEIYEGT 361


>gi|320589507|gb|EFX01968.1| isovaleryl-dehydrogenase [Grosmannia clavigera kw1407]
          Length = 834

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 17/257 (6%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           L ++E   G+D+ ++ T+  + +  G   Y L G K W  + P +   ++ A+     G 
Sbjct: 171 LAMSETGAGSDVVSMRTTAREAVQHGRNGYVLRGSKMWITNGPDAGLIVVYAKTRPDAGS 230

Query: 256 FLVPRLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             +   L D +  P G    R  +K+G R + T EL F + F      L    G    + 
Sbjct: 231 KGITAFLVDTAARPPGFACARKLDKMGMRGSNTGELVFDDVFVPCSHVLGTVDGGARVLM 290

Query: 314 ILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + L+  ++S      M+ +L  A+ Y  +RH  G  +    +++  +AD+   + A+ 
Sbjct: 291 AGLDLERLVLSAGPLGLMQAALDLALPYTHQRHQFGVPVASFQLVQGRLADMHTKLQASR 350

Query: 371 ALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A ++  A   D++   R+E+ A        T  +  + A  V  + ++ +GG GY+EE  
Sbjct: 351 AYTYATARRVDDSSDIRTEDCAG-------TILYAAERATEVALDCIQLLGGMGYMEEMP 403

Query: 430 IARHYRESPANSILLGS 446
            +R  R++    I  G+
Sbjct: 404 ASRILRDAKLYEIGAGT 420


>gi|291455403|ref|ZP_06594793.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358352|gb|EFE85254.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 36/288 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           +  +A   T     +W P++ + E              A+G   LTE   G+D  +++++
Sbjct: 97  SKTIATHGTDEQKAEWLPRLAAGE--------------ALGCFALTEPGTGSDAGSVSTR 142

Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRL 275
            ++   G + + G K F+++  ++D  ++ A+  E  +  FLVP      SP G     +
Sbjct: 143 ARR-DGGDWVIDGAKIFITNGTVADVALVFARTGEKGLTAFLVP----TDSP-GFTATEI 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE 334
             K+G R  AT EL      G  + D          + I L  L    +SV+   V LA+
Sbjct: 197 HGKLGLRGQATAELTLE---GVRVPDTARLGEEGRGLGIALGTLSRGRISVAAGAVGLAQ 253

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+ YA+ R   G  +    +++  +AD  +D+  A  L+ ++A   D   S  E 
Sbjct: 254 GAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLLTHQVARMADAGASPKEY 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           A  A     + KY   + A  V    ++  GG GYI+E  + ++ R++
Sbjct: 314 ATDA----SVAKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGKYLRDA 357


>gi|256394462|ref|YP_003116026.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360688|gb|ACU74185.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 382

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 21/253 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E + G+D AA+T++  +  D  Y ++G K W   S  +D + ++ +        +   
Sbjct: 128 LSEPQSGSDAAALTTRAVRSGD-EYAVTGTKAWITHSGQADFYTLMVRTSDDGAKGISAL 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313
           L E+G+P GL + + + K+G R + T ++           LLG      +++   +E  +
Sbjct: 187 LAENGTP-GLGFGKPEKKMGMRGSVTAQVLLDGARVPADRLLGAEGQGFSIALSALEAGR 245

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  +V   + +L  A+ YA  R   G  + +   +   +AD+A  +A   A  
Sbjct: 246 LGI----AACAVGVAQAALDAAVEYATSRRQFGHAIAEFQGVGFMLADMATAVAVGRAAY 301

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A   D       EAA A++       +C  MA  V  +A++  GG GY  +  + R+
Sbjct: 302 LAAARRRDAGLPYGTEAAMAKL-------FCTDMAMKVTTDAVQVFGGYGYTADFPVERY 354

Query: 434 YRESPANSILLGS 446
            RE+    I+ G+
Sbjct: 355 MREAKVLQIVEGT 367


>gi|107025761|ref|YP_623272.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116693057|ref|YP_838590.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105895135|gb|ABF78299.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116651057|gb|ABK11697.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 377

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A+ I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|265993326|ref|ZP_06105883.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|262764196|gb|EEZ10228.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
          Length = 318

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%)

Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272
           + DG  Y L+G K F++ +P++D F ++A+    V+G  G   F+V R     SP GL  
Sbjct: 75  VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 129

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327
            +   K+G +   T  + F N       L+G +    G    MK+L    L  A +S   
Sbjct: 130 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 188

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  ++ S
Sbjct: 189 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 248

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EA+ A       K +  +M   V    ++  GG+GY+ E +I R YR+
Sbjct: 249 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 290


>gi|198432777|ref|XP_002126363.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
           8 [Ciona intestinalis]
          Length = 422

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 157/381 (41%), Gaps = 53/381 (13%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIH---DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P  ++WD+    P    +++RS +    GL+C   D  +           R A   +   
Sbjct: 70  PNMQKWDEQGHFPV--DVIKRSANLGFGGLYC---DEKYGGTGLS-----RLATSVIFEA 119

Query: 146 LEAGHLMSPSVTSA-SMVALMT----TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L  G + + +  S  +MVA M       +    W P +            M+K S     
Sbjct: 120 LSTGCVSTTAYISIHNMVAWMVDSFGNEKQKNKWLPSL----------TAMEKLSSYC-- 167

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
            LTE   G+D AA+ +  ++  D  Y L+G K F+S + +SD ++++ +  G+ G   + 
Sbjct: 168 -LTEPGSGSDAAALITSAKQDGDN-YILNGSKSFISGATVSDVYLVMVRT-GKEGPKGIS 224

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312
            LL + +  GL + + + K+G +S  T  + F        N  G      N++   +   
Sbjct: 225 TLLVEKNTPGLTFGKSEVKLGWKSQPTGIVNFEDCVVPVENRIGPAGSGFNIAMKGLNGG 284

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    +  S+ G + S   A  +   R   G  L+    ++  +A++A  I ++  L
Sbjct: 285 RINI----SSTSLGGAQKSFEHARDHLSVRKAFGKELLHNQYLQYRMAEMATKITSSRFL 340

Query: 373 SFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + A + DE    +    A A++ A    +  C         A++  GG GY+ E  + 
Sbjct: 341 VRQAAQAMDEKHPNAPALCAMAKLHATDNCFDVCN-------SALQMFGGYGYLCEYPVQ 393

Query: 432 RHYRESPANSILLGSGNAMVL 452
           +  R+   N IL G+   M L
Sbjct: 394 QFVRDVRVNQILEGTNEIMRL 414


>gi|330752055|emb|CBL80566.1| acyl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
 gi|330752176|emb|CBL87135.1| butyryl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
          Length = 381

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 35/289 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W    F  E   T       +   IG   L+E   G+D  + ++    + D  Y L+G K
Sbjct: 96  WGLDTFGNEAQKTKYLTKLASGEQIGAFCLSEPEAGSDATSQSTTAIDMGDH-YLLNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +    +  +++AQ     G   +  L+ +   +G    + ++K+G R         
Sbjct: 155 NWITNGGTCEIALVIAQTNREKGHRGINVLIVEKGMDGFIVGKKEDKLGIRG-------- 206

Query: 292 SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIH 337
           S+T   L  D+ V   P E+   +       A+ ++SG R+ +A             A+ 
Sbjct: 207 SDTHTLLFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAQGALDLALA 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  + +   +   +AD+ + +  A  L ++ A   DE K+  +E+A A++ A
Sbjct: 264 YSKERTTFGKPIHEHQAIAFKLADMEMKVEQARMLVYKAAWLKDEGKNYDKESAMAKLGA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                W       V  EA++  GG G+++E  + R  R++    I  G+
Sbjct: 324 SEAAMW-------VATEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGT 365


>gi|312197996|ref|YP_004018057.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311229332|gb|ADP82187.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 391

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 13/266 (4%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T  AIG L +TE   G+D+  I +   +  +G + LSG K F+++  ++D  I+ A
Sbjct: 115 PRLCTGEAIGALAMTEPGAGSDLQGIRTSAVRDGEG-WRLSGSKTFITNGILADVVIVFA 173

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + +   G       L + + +G    R   K+G R N T EL F +       LLG    
Sbjct: 174 RTDPEAGSRGYSLFLVESAADGFRRGRKLEKLGLRGNDTAELFFDDIVLPSTALLGTEGR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +   L  L     S +  R +    + Y   R   G  + D    +  +A+IA 
Sbjct: 234 GLAHLMERLPLERLSIGATSYAFARAAYDWTVEYCFGRRAFGQPIGDFQNTRFTLAEIAT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++  A A   R   +  +    + +AA A       K+W   +   V+   ++  GG G+
Sbjct: 294 ELDVAQAYHDRAVLALGDGSLTAVDAAKA-------KWWLTDLQNRVVDRCVQLHGGYGF 346

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I R Y ++    I  G+   M
Sbjct: 347 MWEYPITRAYADARIQPIFGGTNEIM 372


>gi|40556687|gb|AAR87758.1| ZmaI [Bacillus cereus]
          Length = 397

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 18/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   + C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           VP+        G+    +++ +G ++    E+EF+N    F  ++G    +   +    +
Sbjct: 183 VPK-----DSVGVNVTHIRDMLGFKAAYLAEIEFNNVEIPFENIIGRPGFAFTYLAPYAL 237

Query: 315 LI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A  ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A+  LS
Sbjct: 238 EFGRISIAFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLS 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                + +E ++ + E    +IM  I KY+  +        A++ +G  G  +  SI+R 
Sbjct: 298 LEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRC 351

Query: 434 YRESPANSILLGS 446
           +R+S    I+ GS
Sbjct: 352 FRDSKTMEIVEGS 364


>gi|41406130|ref|NP_958966.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118466848|ref|YP_879339.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773084|ref|ZP_05214600.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41394478|gb|AAS02349.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118168135|gb|ABK69032.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 460

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 56/329 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P    +WAP+ F    D    A          L ++E  GG+D+  + ++ +
Sbjct: 96  SAIGQAASPEQMLEWAPECFGTPGDLKLAA----------LAISEPEGGSDVRNLRTRAR 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL   
Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVP----GGTP-GLKMV 199

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309
           R  +K+G R++ T EL F         LLG                       + + G  
Sbjct: 200 RKLDKLGCRASHTAELLFEGVRVPAANLLGGQEKLEHKLAKAREVVAGGKRSGSATLGTF 259

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  + ++    A  ++   R +L  A  YA  R   G  +ID   +   +A++A  I AA
Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATSYATEREAFGAPIIDNQGIAFPLAELATQIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R   S+  A +      + R    ++K    ++A      A++ +GG GYI +  
Sbjct: 316 RLLTWR--ASWMAANN----VPFERGEGSMSKMAASEVAVKATERAVQTLGGWGYITDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + + YR++   +I  G+     + V N L
Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVVSNAL 398


>gi|311693798|gb|ADP96671.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 388

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 39/280 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVG 254
           LTE   G+D A++ ++  +  D  Y ++G K F+S +  +D  +++A+          + 
Sbjct: 124 LTEPGAGSDAASLRTKAVRDGDS-YVINGSKVFISGAGATDILVLMARTGAPDSGYKGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307
            F++P        +G+ Y + + K+G  S  T       V +  SN  G       ++  
Sbjct: 183 TFVIP-----ADADGISYGKNEEKMGWHSQPTRMISLENVRIPASNRVGDEGDGFAIAMK 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  ++ I    A  S+ G + +L  A +Y   R   G  L     ++  +AD+A ++ 
Sbjct: 238 GLDGGRLNI----ATCSLGGAQAALLRARNYMHEREQFGKPLAAFQALQFKLADMATNLV 293

Query: 368 AATAL----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           AA  +    +F+L N+  EA           +   + K +       V+ EA++  GG G
Sbjct: 294 AARQMVRLGAFKLDNADPEAT----------LHCAMAKRFATDACFEVVNEALQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGT 462
           YI E  + R+ R+   + IL G+   M L V   LL+ G 
Sbjct: 344 YIREYPLERYLRDLRVHQILEGTNEIMRLIVARRLLDDGV 383


>gi|302531198|ref|ZP_07283540.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302440093|gb|EFL11909.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 614

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 56/304 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEG----- 251
           LTE   G+D+ A  ++  K  DG + + G K F++S  +D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSAENDMVENIMHLVLARPEGPGIET 223

Query: 252 -----RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296
                 +  FLVP+   D      G  NG     +++K+G + + T EL F        G
Sbjct: 224 KPGTKGLSLFLVPKFHFDSKTGELGERNGAFVTNIEHKMGIKVSTTCELTFGQHGTPAKG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--- 351
           +LLG+  V  G  +  +++ Y  +     +++ +      A+ YA+ R V G  L +   
Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGADLPNMLN 340

Query: 352 ----------QPVMKRAIADIALDIAAATAL--------SFRLANSFDEAKSRSEEAAYA 393
                      P ++R+   + L  A A  L        SF+      E    S + A++
Sbjct: 341 KTAPRVTITHHPDVRRS---LMLQKAYAEGLRAIYLYTASFQDQLWTGEGDEASLKLAHS 397

Query: 394 --RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ PI K    + A   + ++++ +GGSG++++  I ++ R++  +S+  G+     
Sbjct: 398 VNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQS 457

Query: 452 LDVL 455
           LD  
Sbjct: 458 LDFF 461


>gi|218295442|ref|ZP_03496255.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244074|gb|EED10600.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 381

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D AA+ ++  +  D  Y L+G K W  +   ++  ++ A 
Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALKTRAVRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 172

Query: 249 VEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           +   +    +V  ++E G+P G    ++  K+G R++ T EL F +              
Sbjct: 173 LNPELRHKGVVALVVEKGTP-GFRAVKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F   +  LN +  PV           A  SV   R +L EA  YA+ R   G  + +  
Sbjct: 232 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEAKKYAKEREAFGRPIAEFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+ + I  A A ++  A   D+    +  +A       I K +  ++A     
Sbjct: 281 AIQFKLADMLMGIETARAYTYYAAWLADQGLPHAHASA-------IAKAYASEVAFEAAN 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY+ E  + +  R+   N I  G+
Sbjct: 334 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 366


>gi|225009980|ref|ZP_03700452.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-3C]
 gi|225005459|gb|EEG43409.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-3C]
          Length = 380

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  ++  K  D  Y ++G K W  +   +  ++++AQ + + G   +  
Sbjct: 125 LSEPEAGSDATSQKTRAVKKGD-YYEITGTKNWITNGSSASIYLVIAQTDPKKGSKGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + +    G      +NK+G RS+ T  L+F+              FGF L    +S G 
Sbjct: 184 FIVEKESPGFVIGPKENKLGIRSSDTHSLQFNQVKVHEENRIGEEGFGFTLAMKTLSGGR 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                  I + +  + ++     L  A++YA++R   G  +     +   +A +   I A
Sbjct: 244 -------IGIAAQALGIAAGAYEL--ALNYAKQRETFGKPISQHQAIAFKLAQMHTKIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A   D+  +     A A++       +  ++A  V  EA++  GG+G+++E 
Sbjct: 295 ARHLVYKAAWEKDQGLNYDLSGAMAKL-------YASEVAMEVSVEAVQVFGGNGFVKEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|161620515|ref|YP_001594401.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|163844613|ref|YP_001622268.1| hypothetical protein BSUIS_B0448 [Brucella suis ATCC 23445]
 gi|254702839|ref|ZP_05164667.1| hypothetical protein Bsuib36_02649 [Brucella suis bv. 3 str. 686]
 gi|260568249|ref|ZP_05838718.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261753440|ref|ZP_05997149.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|161337326|gb|ABX63630.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|163675336|gb|ABY39446.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|260154914|gb|EEW89995.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261743193|gb|EEY31119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 375

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 28/266 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G     +++K+G  S+ T  L F+N    +   L       E  
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEG---EGY 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI L  L+   + ++   V +A A       YAR R   G  +I+   +   +AD+A  I
Sbjct: 231 KIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+ 
Sbjct: 291 ETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYLA 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           +  + R YR+     I  G+ +   L
Sbjct: 344 DYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|126643031|ref|YP_001086015.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 361

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256
           L +TE  GG+D+AA+  Q + I DG  Y +SG K F++S + +D + +  + +  + G  
Sbjct: 101 LAITEPGGGSDVAAL--QTKAIRDGDNYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 158

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +  
Sbjct: 159 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQENAGFKVIMNNF 217

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +      +++     +   EA+ +A++R   G  LID  V++  + D+A  + +  AL 
Sbjct: 218 NMERFFLGVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 277

Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              A    + K +  E     +  + +A  T  +C          A++ +GG G++    
Sbjct: 278 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 330

Query: 430 IARHYRESPANSILLGSGNAM 450
             R YRE   N I  G+   M
Sbjct: 331 SERIYREVKVNMIGGGAEEIM 351


>gi|313498510|gb|ADR59876.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 589

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ +   A  + LTE   GTD+  I ++ +  +DG   +SG K F++    D       +
Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP+ L +     G+ N +    +++K+G +++AT  + F  
Sbjct: 214 VLAKLPDAPAGAKGISLFLVPKFLLEADGRLGARNAVHCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352
             G+L+G+ N     +  M     L   I  +     S   A  YA  R  S      Q 
Sbjct: 274 AIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 333

Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
                 P++            R + +     A        +A   ++A  R        +
Sbjct: 334 HDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|326317978|ref|YP_004235650.1| glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374814|gb|ADX47083.1| Glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 399

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 23/265 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K + G Y L G K W  +
Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAYKTAGG-YKLKGSKMWITN 173

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 174 SPIADVFVVWAKEVSESGAVGPIRGFVLEKGM-QGLTAPAIHGKVGLRASITGEIVMDDV 232

Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
           F   + + N     V+ +K     L+SA   ++   +  AE     A  Y   R   G  
Sbjct: 233 F---VPEENAFP-EVQGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRP 288

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +IA       RL    DE  +  E  +       I K   C  A
Sbjct: 289 LAANQLIQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCGKA 341

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 342 LDIARMARDMMGGNGISDEFGVARH 366


>gi|296134748|ref|YP_003641990.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295794870|gb|ADG29660.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 393

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D   ++++ + +  G Y L+G+K W  +SP++D F++ A+ + G +  F+
Sbjct: 138 FGLTEPDHGSDPGGMSTRARAVPGG-YALNGNKMWISNSPIADVFVVWAKDDAGEIRGFV 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +     D    GL    +  K+G R++ T E+     F     + N              
Sbjct: 197 L-----DKGAKGLSAPAVHGKVGLRTSITGEIVMDQVF---CPEENAFPTVCGLKGPFTC 248

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A DI+     
Sbjct: 249 LNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLVQKKLADMATDISLGLQG 308

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL    DE  +  E       +  + K   C  A  +   A + +GG+G  +E  +AR
Sbjct: 309 VLRLGRMKDEGTAAPE-------VTSLLKRNNCGKALDIARTARDMLGGNGISDEFGVAR 361

Query: 433 H 433
           H
Sbjct: 362 H 362


>gi|256043141|ref|ZP_05446083.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|260564362|ref|ZP_05834847.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265989572|ref|ZP_06102129.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260152005|gb|EEW87098.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263000241|gb|EEZ12931.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 380

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%)

Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272
           + DG  Y L+G K F++ +P++D F ++A+    V+G  G   F+V R     SP GL  
Sbjct: 137 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 191

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327
            +   K+G +   T  + F N       L+G +    G    MK+L    L  A +S   
Sbjct: 192 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 250

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  ++ S
Sbjct: 251 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 310

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EA+ A       K +  +M   V    ++  GG+GY+ E +I R YR+
Sbjct: 311 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 352


>gi|320592978|gb|EFX05387.1| acyl-CoA dehydrogenase [Grosmannia clavigera kw1407]
          Length = 398

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 26/304 (8%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           VH      +F +   P  K    P   T       L+E   G+D  A+ ++  +   G +
Sbjct: 104 VHNTLVNTVFIKYASPALKKRILPKLATESVGSFCLSEPVSGSDAFALATRATESESG-F 162

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            +SG K W  +S  +D F++ A ++   G   +   L +    G    + + K+G R+++
Sbjct: 163 RISGSKMWITNSMEADVFVVFANLDPAKGYRGITAFLVEKGTKGFSIAKKEKKLGIRASS 222

Query: 286 TVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIH 337
           T  + F +       LLG+       + G + + +I I        ++G+ +   E A+ 
Sbjct: 223 TCVINFDDVDIPKENLLGERGHGYKYAIGLLNEGRIGI-----AAQMTGLALGAWENAVK 277

Query: 338 YARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           Y        G LI +   M+   A   ++IAAA AL +  +   +  +   ++AA A++ 
Sbjct: 278 YCWNDRKQFGQLIGEFQGMQHQFAQSYVEIAAARALVYNASRKKEAGEDFVKDAAMAKL- 336

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +  ++A  V + A+E +GG G++ E    +++R+S   +I  G+ N  +  +  
Sbjct: 337 ------YASQVAGRVSSLAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIAK 390

Query: 457 LLEK 460
           LL+K
Sbjct: 391 LLQK 394


>gi|311031801|ref|ZP_07709891.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           m3-13]
          Length = 594

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 47/341 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +   +G  Y L+G K W  ++  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTAKLNDEGTHYVLNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G + ++T  L   +       LLG+  +  G V    IL
Sbjct: 210 EREF-----GGVSTGPEEKKMGIKGSSTRTLVLEDALVPKENLLGE--IGRGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A+ +V G +  +  +  YA +R      +    +++  +A++A+   A  +  
Sbjct: 263 NIGRYKLAVGTVGGSKRGIELSATYANQRQQFKTPIAKFSLIQEKLANMAVKTYATESSV 322

Query: 374 FRLANSFDEAKSR---SEE----------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R    F+++  R    EE          + YA I   + K +  +    V+ EA++  G
Sbjct: 323 YRTVGLFEDSMGRLTKEEEKDPNAVAKAVSEYA-IECSLNKVFGSETLDYVVDEAVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  + R YR+S  N I  G+     L V            L L++K  +L E+L
Sbjct: 382 GYGFMAEYEVERMYRDSRINRIFEGTNEINRLLVPGTYLRKALKGELPLIQKAQSLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
              + +++G        +L     L K  K +A  +T  +A
Sbjct: 442 MMLMPEEVGDG------VLEQEKYLVKNAKKIAILMTGLVA 476


>gi|23098269|ref|NP_691735.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776494|dbj|BAC12770.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 565

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 28/262 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D +A+ T+      +  + ++G K W  ++ +++ +++ A  E  +  F+V 
Sbjct: 160 LTEPNAGSDALASKTTAKWNDENQTWTINGEKQWITNAHIANVYVVFANTEQGITAFIVE 219

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
           R  +     G+     + K+G + ++T       VEL+ +   G       V  G    +
Sbjct: 220 RTFK-----GVSIGPEEKKLGIKGSSTATLILEDVELDSAQVLG------EVGKGHRIAL 268

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            IL    L  A  ++   + +L  AI Y + R   G  +++  +++  IA++A  I  + 
Sbjct: 269 NILNLARLKIAFSNIGMSKQALEFAIKYGKDRQQFGKNIVEFGLIQEKIANMATAIYKSE 328

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGY 424
             ++  A+  D     + +  +   +A       I K    +    ++ EA++  GG GY
Sbjct: 329 CTAYYTASLLDRQLIDNGKENFISSLARFSMDCSINKVLASESLDMIVDEALQIHGGYGY 388

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++E  + R YR+S  N +  G+
Sbjct: 389 MQEYEVERLYRDSRINRLFEGT 410


>gi|325001281|ref|ZP_08122393.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 387

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 37/270 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252
           G+ LTE   GTD+  I +  ++  D  Y ++G K W  ++  +D   +L + +       
Sbjct: 121 GIALTEPGAGTDLQGIRTTARRDGDD-YVVNGTKMWITNARHADPLPVLVKTDPSAEPAH 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308
            G  ++  L+E  SP G        K+G +   + E+        +L D+ V      G 
Sbjct: 180 KGMSIL--LVEADSP-GFEVTADIGKLGYKGTESCEV--------VLTDVRVPASQLLGG 228

Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
           VE     + L  L++  ++++   V +A     EA++YAR R   G  + +   +++ +A
Sbjct: 229 VEGRGLQQALSSLETGRINIAARSVGIAQRAYDEALNYARERTAFGRPIGEFQAVEQRLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            IA+ + AA  +++  A+  D+      E+  A+I A      C         ++M   G
Sbjct: 289 QIAVRLQAARLMTYWAASRMDDGVRMDTESGMAKIFASEQALECA-------IDSMRIHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY  E  I R YR++P  SI  G+ + +
Sbjct: 342 GYGYSTEFEIERLYRDAPLMSIGEGTNDVL 371


>gi|193077827|gb|ABO12702.2| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii ATCC 17978]
          Length = 381

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V  + ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|154331159|ref|XP_001562019.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059341|emb|CAM37043.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 511

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 17/249 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +  +K  D  + ++G K W  +  ++  + +LA+ EG    F+V  
Sbjct: 259 VTEPTGGSDVAGLKTTARKEGD-RWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-- 315

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319
              D +  G+     +  +G R + T  + F N        +     G    M++  +  
Sbjct: 316 ---DANAPGVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTR 372

Query: 320 S--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           S  AI +V   R +  EA  YAR R   G  +     +   +A++A  + A   +++R  
Sbjct: 373 SSVAIAAVGLSRRATDEATRYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 432

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +  +  A+ A++MA         +A      A++  GG+GY     + + YR+ 
Sbjct: 433 WDTDQGRRNTYYASCAKMMA-------ANLAEKCATNAVQIFGGNGYNTGYPVEKLYRDC 485

Query: 438 PANSILLGS 446
              SI  G+
Sbjct: 486 KIFSIYEGT 494


>gi|111021608|ref|YP_704580.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821138|gb|ABG96422.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 29/294 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             +  G  LTE   G+DIA++ +  ++  DG +
Sbjct: 101 TEEQKRRWLPRLASGE-------------LLAGFALTEPDAGSDIASMRTTARREDDG-W 146

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            LSG K ++S+   +D  ++ A+ +   G      F++P+    G+P G+ Y   ++K+G
Sbjct: 147 HLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVLPQ----GTP-GVSYSEPQDKLG 201

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            RS  T  +   +    L  D  V T        L  L+ A + V+ M   +A       
Sbjct: 202 IRSAPTYTVFLDDVV--LPPDAVVGTEGRGGNIALTALNRARIDVAAMANGIALRAWELG 259

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R + +       P+ +     + L    A  ++ R+  + D A    +  A  R  A ++
Sbjct: 260 RSYAAERKQFGHPIAEFQAIQLLLGACDAQLVASRV--TADWAADVKDAGADLRRAASVS 317

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           KY   +   +++ + ++  GG+G++ E  I R YR+     I  G+    +L +
Sbjct: 318 KYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRILRIFEGTSQIQLLTI 371


>gi|288541495|gb|ADC45567.1| acyl-CoA dehydrogenase [Streptomyces nanchangensis]
          Length = 387

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 20/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
           + LTE  GG+D+ A+ +  ++ +DG Y +SG K W  +S  S    +L +   +      
Sbjct: 124 MALTEPGGGSDLQAMRTVARRAADG-YVVSGSKTWITNSRRSQLIALLCKTDPDATPAHQ 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            V  LL +  P GL   R   K+G +   + EL F         +LG +    G  + MK
Sbjct: 183 GVSILLAEHGP-GLTVSRDLPKLGYKGVESCELSFDGYRAAADAVLGGVE-GKGFAQMMK 240

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L  A  ++   R +  +A+ YA+ R   G  +     +   +AD+A  + AA  
Sbjct: 241 GLETGRLQVAARALGVGRAAFEDALAYAQERESFGTPIWKHQSIGNYLADMATSLTAARQ 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+   A   D  +    EA  A++ A  T       A  +   A+   GG GY  E  + 
Sbjct: 301 LTLYAAREADAGRRVDMEAGMAKLFASET-------AMQIALNAVRIHGGYGYSTEFDVE 353

Query: 432 RHYRESPANSILLGSGN 448
           R++R++P   +++G G 
Sbjct: 354 RYFRDAPL--MIVGEGT 368


>gi|239945375|ref|ZP_04697312.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991829|ref|ZP_04712493.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  S  +I+LA+  G  G   +  
Sbjct: 127 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLART-GEDGPRGISA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
            + +    GL +   + K+G  +  T       V +      G   G   ++   +   +
Sbjct: 185 FVVERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGR 244

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L  ++ +   R   GG L+D   ++  +AD+A ++AAA AL 
Sbjct: 245 LGI----AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALV 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A + D         A A  +  + K++      +V   A++  GG GY+ E  I + 
Sbjct: 301 RQAAEALD------RNTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKI 354

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 355 VRDLRVHQILEGTNEIM 371


>gi|156402507|ref|XP_001639632.1| predicted protein [Nematostella vectensis]
 gi|156226761|gb|EDO47569.1| predicted protein [Nematostella vectensis]
          Length = 419

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVG 254
           L+E   G+D  A  ++   + DG  Y L+G K W  +   S+A ++ A  +       + 
Sbjct: 161 LSEPDNGSDAGA--AKTTAVLDGDHYVLNGTKAWITNGYESEAAVVFATTDRSKKHKGIS 218

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVP+        GL     ++K+G R+ +T  L F +     +   N+   P    KI
Sbjct: 219 AFLVPK-----PTPGLTLGNKEDKLGIRATSTCYLVFEDC---RIPKENLLGEPGYGFKI 270

Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD+  + ++G  + +A+A     + YA +R      +     ++  +ADIA  + A
Sbjct: 271 AMQTLDAGRIGIAGQALGIAQAALDCAVDYADKRMAFNQKISKLQTIQMKLADIATQLEA 330

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A   D   + ++EAA A++ A          A     ++++ +GG GY+ + 
Sbjct: 331 ARLLTWKAAAIKDAGMNYTKEAAMAKLAASEA-------ATFAAHQSIQILGGMGYVTDM 383

Query: 429 SIARHYRESPANSILLGS 446
              RHYR++    I  G+
Sbjct: 384 PAERHYRDARITEIYEGT 401


>gi|159043846|ref|YP_001532640.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911606|gb|ABV93039.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 387

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 116/256 (45%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K +D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVGMKLRAEKRND-HYRLNGTKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G       +K+G R + T EL F +    F  +LG+            ++
Sbjct: 187 TAFLIEKEMAGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGRGVAV-----LM 241

Query: 316 IYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + +SG+ +      L E + Y   R   G  + +  +M+  IAD+   + +A 
Sbjct: 242 SGLDYERVVLSGVNIGIMAGCLDEVMPYMTERRQFGEPIGNFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++ +A + D  +   ++AA   +       +  +    V  +A++ +GG+G++ +  +
Sbjct: 302 AYAYEVAKACDRGEVTRQDAAACVL-------YASEEGMKVAHQAVQAMGGAGFLNDSPV 354

Query: 431 ARHYRESPANSILLGS 446
           AR +R++    I  G+
Sbjct: 355 ARMFRDAKLMEIGAGT 370


>gi|167834906|ref|ZP_02461789.1| putative acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 378

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +   G Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTTAVR-DGGHYVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTDMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAEMKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW  ++   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|118471487|ref|YP_886355.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172774|gb|ABK73670.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 384

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256
           + LTE  GG+D+ A+ +  ++  D  Y ++G K W  ++  SD   ++ + +   +    
Sbjct: 120 MALTEPGGGSDLQAMRTVARRDGDD-YVINGSKTWISNARRSDLVALMCKTDPDAQPAHK 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            V  LL +  P G    R   K+G +   + EL F++       LLGD +   G  + MK
Sbjct: 179 GVSILLVEKVP-GFDVSRDLPKLGYKGVESCELNFTDARVPVSSLLGD-DEGRGFAQMMK 236

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L  A  +    R +  +A+ Y++ R   G  +     +   +AD+   + AA +
Sbjct: 237 GLEVGRLQVAARATGVARAAFEDALRYSQERESFGKPIWQHQSVGNMLADMGTKLYAARS 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A  FD  +    EA  A++ A  T       A  +  +A+   GG GY  E  + 
Sbjct: 297 LLLSAAEKFDAGQRCDMEAGMAKLFASET-------AMQIALDAVRVHGGYGYSTEYDVE 349

Query: 432 RHYRESPANSILLGSGN 448
           R++R++P   +++G G 
Sbjct: 350 RYFRDAPL--MIVGEGT 364


>gi|119385631|ref|YP_916686.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376226|gb|ABL70990.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 375

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 30/261 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE   G+D + + ++ ++  D  Y + G K F+SS  +   +++  V     G+ G
Sbjct: 120 GFALTEPHAGSDASNLRTKARREGDH-YVIDGAKQFISSGKNGKVVIVFAVTDAAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305
              F+VP      +P G     +++K+G  S+ T  L F+       N  G       ++
Sbjct: 179 ISAFIVP----TDTP-GYEVVSVEHKLGQHSSDTCALAFTGMRVPVENRLGAEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A+ YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LSNLEGGRIGI----AAQAVGMARGAYEAALAYARERITFGRPIIEHQAVAFRLADMATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  +  R A   +  K    EA+ A++ A        +MA  V + A++  GG GY+
Sbjct: 290 IDAARLMVLRAAMLREAGKPCLTEASMAKLFA-------SEMAERVCSAAIQLHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R YR+     I  G+
Sbjct: 343 ADYPVERIYRDVRVCQIYEGT 363


>gi|289670161|ref|ZP_06491236.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 391

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWAHTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E  SP G   Q + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 196 ----ETYSP-GFSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQA 250

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L
Sbjct: 251 RYGIAWGAIGAAVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +    R E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 311 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|321249273|ref|XP_003191401.1| isovaleryl-CoA dehydrogenase 2, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317457868|gb|ADV19614.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 417

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 29/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG--- 254
           L ++E   G+D+ ++ +   K   G  + ++G K W  ++P+S  F++ A+ +  V    
Sbjct: 153 LAMSEPDAGSDVVSMRTNAIKGDKGEGWTMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 212

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
               FLV +  E     G       +K G R + T EL F N     + + NV     + 
Sbjct: 213 GMTAFLVEKGWE-----GFEVGESLDKFGMRGSPTAELFFDNV---KIPEENVLGEVGKG 264

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +L+  LD   + +SG     M+ +L  A+ Y   R   G  +    +M+  +AD+   
Sbjct: 265 ASVLMSGLDLERLVLSGGPLGIMQAALDMALDYTHERKQFGKQIGTFQLMQGKLADMYTK 324

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++A+ A  + +A + D  K    + A A +       +    A  V  EA +C+GG+GYI
Sbjct: 325 LSASRAYVYAVARACDAGKISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYI 377

Query: 426 EERSIARHYRESPANSILLGS 446
            +    R  R+S   ++  G+
Sbjct: 378 NDYPAGRLVRDSRLYTVGAGT 398


>gi|312139134|ref|YP_004006470.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888473|emb|CBH47785.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 377

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258
           +G+TE   G+D+ AI +   +  D  Y ++G K F+++  S   I+LA + + + G   V
Sbjct: 122 IGMTEPGAGSDLKAIRTTAVRDGDH-YVVNGSKTFITNGSSADMIVLAVKTDPKAGARGV 180

Query: 259 PRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
             L+ D    P G    R+ +K+G  +  T EL F +       LLG+     G +    
Sbjct: 181 SLLIVDLRDCP-GFTVGRVLDKVGQHAADTSELSFVDVKVPVSNLLGEEGQGFGQLIAQL 239

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   L  A  +   M  ++ E + Y + R   G  L +         + A ++A    ++
Sbjct: 240 VQERLIIAAQASGAMNRAVEETVAYVKSRQAFGHSLFE-------FQNTAFELAECQTIA 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D               A + KYW       V+   ++  GG GY+ E  +AR 
Sbjct: 293 RTCEVFLDHCIQEHLRGELDAAEAAMAKYWLTDKQCEVVDRCVQLHGGYGYMREYLVARM 352

Query: 434 YRESPANSILLGSGNAM 450
           Y ++    I  G+   M
Sbjct: 353 YEDARVQKIYAGANEVM 369


>gi|190572278|ref|YP_001970123.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010200|emb|CAQ43808.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 390

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE  GG+D A++ +  + + DG  + +SG K W  S P++D  I+ AQ E  +  F+
Sbjct: 136 FGLTEAHGGSDPASMKT--RAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGFV 193

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           + + +      G   Q +K+K+  R++ T  L F +        L ++    GP+  +  
Sbjct: 194 LQKGMA-----GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLTQ 248

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y   +   +      L EA+ YA+ R + G  L      +  +A++A  I  A  L+ 
Sbjct: 249 ARY-GISWGPIGAAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTAQLLAL 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +L    +  + + ++ + A       K+  C+MA  +  E  + +GG+G   E    RH
Sbjct: 308 QLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHVAIRH 359


>gi|126435228|ref|YP_001070919.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235028|gb|ABN98428.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 611

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 48/299 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  + SDG + ++G K F+S   + D       ++LA+ +G    
Sbjct: 164 LTEPDAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
              +  F VP+ L D       S NG+    +++K+G +S+ T E+ F       G+L+G
Sbjct: 224 TKGLSMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGGDQPAIGWLVG 283

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--------- 349
           D  V  G  +  K++    + + +MS   +      A+ YA+ R + G  L         
Sbjct: 284 D--VHNGIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTR-IQGPDLTRTSDKTAP 340

Query: 350 ----IDQPVMKRAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396
               I  P ++R++      A+    +   TA+          + S +E    A+I   +
Sbjct: 341 RVPIIRHPEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLL 400

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            P+ K    + A   +  +++  GGSGY+++  + ++ R+   N++  G+      D+L
Sbjct: 401 LPVVKAVSSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLL 459


>gi|73537387|ref|YP_297754.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72120724|gb|AAZ62910.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 396

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 28/275 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCLSGHKWFLSSPM-SDAFIML 246
           M    +   + ++E   G+D+ ++ ++   +K  +G  Y ++G K F+++   +D   ++
Sbjct: 127 MASGEMVAAIAMSEPGAGSDLKSVRTRAVREKTENGDCYRINGAKTFITNGYHADLVCLI 186

Query: 247 AQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
           A+ +   G   V  ++ E     G    R+  KIG +   T EL F +       LLG+ 
Sbjct: 187 AKTDPEAGTRGVSLIMVETRDLPGFRRGRILEKIGQKGQDTAELFFDDVLVPCENLLGEQ 246

Query: 303 N-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                   +   P E M I      A+ +V+ M+ ++     Y R R V G  L+D    
Sbjct: 247 EGQGFYQLMQQLPQERMII------ALGAVASMQRAIELTTDYVRERKVFGQPLLDLQNT 300

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+   +  A  A +F      ++   R  E       A + K+WC +    +I E 
Sbjct: 301 RFKLAECKTN--ATIAATF-----VNDCMVRLMEGKLDAATAAMAKWWCTQRNCEIIDEC 353

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IAR Y  +    I  GS   M
Sbjct: 354 LQLHGGYGYMLEYPIARMYANARVGKIYGGSNEIM 388


>gi|77360395|ref|YP_339970.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875306|emb|CAI86527.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 391

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +   ++ A+ +   G   +
Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDAHTLVIYAKTDLTAGAKGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F N       +LG+LN      E +K+L
Sbjct: 191 TAFIVESDFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
           +  LD   + ++   + + +A     + Y   R        D P+     ++  +AD+  
Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY
Sbjct: 300 QMNAARSYVYTVARSCDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E +  R  R++    I  G+
Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374


>gi|302344548|ref|YP_003809077.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641161|gb|ADK86483.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 380

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 27/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GR 252
           + +TE   G+D+A I +  Q+  D +  ++G K F+S+ ++    ++A  +         
Sbjct: 123 VAMTEPNTGSDLANIRTTAQQDGD-MVVINGQKTFISNGINCGVCVVAAKDPAEKDPYKA 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V    E  +P G    R  NKIG  S  T EL F++     G  LGD     G +
Sbjct: 182 IDLFVV----EADAP-GFEKGRKLNKIGWHSQDTAELYFTDCRIPVGNRLGDK--GAGFI 234

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+ L    L   I +V+   V L   I Y + R   G  +      +  + ++A ++ 
Sbjct: 235 MLMQKLQQERLICGIGAVAAAEVILERTIAYCKERSAFGKPISKFQNTQFELVEMATEVK 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                  +      E KS   E +       + KYW  +M   V    ++  GG GY EE
Sbjct: 295 LGRLFVDKCIADHMEGKSLPAEVS-------MLKYWTTEMVKNVADRCLQLHGGYGYCEE 347

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             IAR +R+    SI  G+   M
Sbjct: 348 YPIARAWRDVRVMSIFAGTNEIM 370


>gi|264677846|ref|YP_003277752.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208358|gb|ACY32456.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 46/315 (14%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ S  ++A  T  +  + W P++ S E             +  G+ +TE   G+D+ A+
Sbjct: 96  TIASHYLLAYGTEEQKQR-WLPRLCSGE-------------LLAGIAMTEPSVGSDLKAM 141

Query: 215 TSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCY 272
            ++ Q+  DG  Y ++G K F+++  +   +++A   G  G   V  + LE  +  G   
Sbjct: 142 RTRAQR--DGEHYVINGSKTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRV 199

Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R   KIG   + T EL F +       LLG      G  + M  L Y +  ++ VS   
Sbjct: 200 GRRLGKIGQHISDTAELFFEDLRIPVSHLLGGTE-GQGFKQLMSQLPY-ERMLLGVSAAA 257

Query: 330 VSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSF 380
                    + Y ++R   G  + D    +  +A+ A    A    SF      RL +  
Sbjct: 258 AIEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSFVNDCIQRLLDG- 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               +   EAAY      + K+WC +    V+ E ++  GG GY+EE  IAR Y ++   
Sbjct: 315 ----TLDNEAAY------MAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQ 364

Query: 441 SILLGSGNAMVLDVL 455
            I  G  N ++ D++
Sbjct: 365 KI-YGGANEIMKDLI 378


>gi|261189941|ref|XP_002621381.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239591617|gb|EEQ74198.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 438

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y ++G K W  +S  +  FI+ A 
Sbjct: 167 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-YKINGSKMWITNSMEAGFFIVFAN 225

Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++   G   +   ++E G+P G    + + K+G R+++T  L F +     +   N+   
Sbjct: 226 IDLSKGYKGITAFIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 281

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIA 360
             +  K  I  L+   + ++     LA      A +Y        G LI +   M+  +A
Sbjct: 282 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAANYIWNDRRQFGQLIGEFQGMQHQVA 341

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +IAAA AL +  A   +  +   ++AA A++       +  ++A  V   A+E +G
Sbjct: 342 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMG 394

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 395 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 434


>gi|254420863|ref|ZP_05034587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187040|gb|EDX82016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   +  D  Y L+G K F+S +  SD ++++ +  G     +   
Sbjct: 124 LTEPGSGSDAAALRTTAVRDGDH-YVLNGSKAFISGAGTSDLYVVMVRTGGEGAKGVSAL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P GL +   + K+G  +  T  ++F       +N  G        +   ++  +
Sbjct: 183 VVEAGTP-GLSFGAQERKMGWNAQPTAIVQFDDCRVPAANLLGEEGAGFRYAMAGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G R++L  A  Y   R   G  + +   ++  +AD+A D+ AA  + 
Sbjct: 242 LNI----AACSLGGARLALETAQDYVATRKQFGRPIGEFQALQFRLADMATDLEAARLMV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A + D      E+  +  +   +    C ++A     EA++  GG GY+++  + R 
Sbjct: 298 LRGAWAID--TDHPEKTKWCAMAKRLATDACFQIAD----EALQLHGGYGYLKDYPLERI 351

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461
            R+   + IL G+   M + +   + +G
Sbjct: 352 VRDLRVHRILEGTNEIMRVIIAREMARG 379


>gi|85713545|ref|ZP_01044535.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85699449|gb|EAQ37316.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 404

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + S+ +K+SDG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKSRAEKVSDG-YRLTGSKTWISNAPIADLFVVWARSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASVTGEIVMDGVVVPEESLLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S G+  +  + +H AR+    R   G  L    ++++ +AD+  +IA
Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARKYVLERKQFGRPLAAAQLVQKKLADMQTEIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQGSLRVGRLMDEGKMTPE-------MISIIKRNNCGKALDIARAARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|119504471|ref|ZP_01626550.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459493|gb|EAW40589.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
          Length = 394

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D+AA+T   Q+  D  + L+G K W  ++ ++D + + A+     G     C
Sbjct: 134 LSEPNAGSDVAAMTCSAQRDGD-EWVLNGTKTWISNAGIADFYTVFARSSDAGGAKGISC 192

Query: 256 FLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           F+V    E G+P     +R+     + +G        L+F+N       L+G+     G 
Sbjct: 193 FIV----EAGTPGFEVTERIDLVAPHPLGT-------LQFTNCRIPAASLVGEEGRGFGI 241

Query: 309 VEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              M  L    S + + + GM R +L E + Y   R + GG L D  +++  I ++AL +
Sbjct: 242 A--MATLDVFRSTVAAAALGMARRALDETLDYTAERDIFGGKLGDLQLVQAKIGEMALGV 299

Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A+  L +R A + D A  R + EAA A       KY   + A  VI  A++  GG G  
Sbjct: 300 DASALLVYRAAWTKDCAAERVTREAAMA-------KYHATETAQQVIDAAVQLHGGKGVT 352

Query: 426 EERSIARHYRESPANSILLGS 446
           +   +   YR+  A  I  G+
Sbjct: 353 KGYIVESLYRDIRALRIYEGA 373


>gi|148253939|ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146406112|gb|ABQ34618.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 404

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++ +K++DG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEVVMDGVVVPEEALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S G+  +  + +H AR+    R   G  L    ++++ +AD+  +IA
Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGKPLAATQLVQKKLADMETEIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARVARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YQVMRH 372


>gi|297154276|gb|ADI03988.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVG 254
           G  L+E + G+D AA+T +  K +DG Y ++G K W      +  + + A+       + 
Sbjct: 124 GYSLSEPQAGSDAAALTCRADKDTDG-YRINGAKAWITHGGEAGFYALFARTSPGSDGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL P     G  +GL + R + K+G  +  T    + N    LL    +     + ++I
Sbjct: 183 CFLAP-----GHTDGLTFGRPEEKMGLHAIPTTAAFWDNA---LLDPDRLIGREGQGLQI 234

Query: 315 LIY-LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LDS  + ++     LA+A   A       R   G  +ID   +   +AD+A  + +
Sbjct: 235 AFSALDSGRLGIAACATGLAQAALDAAVAYAHERTAFGRKIIDHQGLGFLLADMAAAVDS 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A     A   D  +  S +A+ A+++A          A  V  +A++  GG GY  + 
Sbjct: 295 ARATYLDAARRRDAGRPYSRQASVAKLIA-------TDAAMKVTTDAVQVFGGYGYTRDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R+ RE+    I  G+
Sbjct: 348 PVERYMREAKIMQIFEGT 365


>gi|297193204|ref|ZP_06910602.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720474|gb|EDY64382.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 608

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 141/313 (45%), Gaps = 53/313 (16%)

Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +D  N+A  +   +A+       + LTE   G+D+ A  ++  +  DG + + G K F++
Sbjct: 139 FDEGNEAQKKIAEIAVEKRWGSTMVLTEPDAGSDVGAGRTKAIQQEDGSWHIEGVKRFIT 198

Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S   D        +LA+ EG       +  FLVP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWETGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333
           G +++ T E+ F +     G+L+GD +     +  M ++I     ++   +++ +     
Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKHDG---IRQMFMIIEFARMMVGTKAIATLSTGYL 315

Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380
            A+ YA+ R V G  L +              P ++R++           AL    A+  
Sbjct: 316 NALEYAKER-VQGPDLKNFADKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQ 374

Query: 381 DE---AKSRSEEA----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           DE    ++  E+     A   ++ PI K +  + +   +A++++  GGSGY++E  + ++
Sbjct: 375 DEIALKETAGEDTKSLVALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQY 434

Query: 434 YRESPANSILLGS 446
            R++  +++  G+
Sbjct: 435 IRDAKIDTLYEGT 447


>gi|156743108|ref|YP_001433237.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234436|gb|ABU59219.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 445

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 44/277 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K        LTE   GTD  A+ +  ++  D  Y L+G K W   + ++D F++ A+
Sbjct: 159 PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGDS-YILNGEKTWISLADIADNFLVFAK 217

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +   G     CF+V R +      G     +  K+G R+         NT   +L D+ 
Sbjct: 218 TDPSKGNRGISCFIVERTMP-----GFSSLPIHGKLGVRAG--------NTGSVILEDVR 264

Query: 304 VSTGPV--------EDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349
           V   PV        E  KI +  LD+   +V+      ++ SL  +I YA+ R   G  +
Sbjct: 265 V---PVANRLGEEGEGFKIAMTALDNGRYTVAAGATGLIQASLEASIRYAQERQTFGVPI 321

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  ++KR I+ +   +  +  L +R     ++ +  + E   A+  A ++ +       
Sbjct: 322 AEHQLVKRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSFEAAD--- 378

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +A++  G  GY +E  + R+ R +    I  G+
Sbjct: 379 ----DAIQIHGAYGYSDEYPVERYLRNARGAIIYEGT 411


>gi|109900292|ref|YP_663547.1| glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
 gi|109702573|gb|ABG42493.1| Glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 394

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 11/172 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ +Q +++ DG YCL+G K W  +SP++D F++  ++ G +  F++
Sbjct: 139 FGLTEPNSGSDPASMLTQAKEV-DGGYCLNGSKMWITNSPIADVFVIWGKLNGAIRGFIL 197

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + ++     GL   +++ K   R++ T E+   + F     +L D+    GP   +   
Sbjct: 198 EKNMQ-----GLSAPKIEGKFSLRASVTGEVVMQDVFVPVENILPDVEGLKGPFSCLNKA 252

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            Y   A  S+        +A  Y   R      L    ++++ +AD+  +I+
Sbjct: 253 RY-GIAWGSLGAAEFCWHQARQYCLDREQFSRPLAANQLIQKKLADMQTEIS 303


>gi|207722669|ref|YP_002253105.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206587851|emb|CAQ18433.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 403

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%)

Query: 190 PMQK----TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           P Q+    T VA G       L+E   G+D+AA+    +   DG Y L G K W  +  +
Sbjct: 111 PAQRERYLTQVARGEAIAAFALSEPDAGSDVAALACAARVDGDG-YVLDGEKTWISNGGI 169

Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT 294
           +D +++ A+     G   +   ++E G+P     +R+     + +         +  +  
Sbjct: 170 ADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPHPLARLRFTGCRIPAAQR 229

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       V+   ++  +  +    A  ++   R +L EA+  A  R +  G+L D  +
Sbjct: 230 VGAAGEGFKVAMRTLDVFRTSV----AAAALGFARRALDEALARATTRKMFNGVLADFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A +A  I +A  L++R A   D+ +S + EAA A++ A        + A  VI  
Sbjct: 286 TQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDA 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG G + E+ + R YRE  A  I  G+
Sbjct: 339 AVQMWGGLGVVSEQPVERLYREIRALRIYEGA 370


>gi|117927614|ref|YP_872165.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B]
 gi|117648077|gb|ABK52179.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B]
          Length = 388

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 36/278 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLA 247
           P+ +       GLTE  GG+D  A  ++     DG + + G K F+++  ++  + I + 
Sbjct: 118 PLARGERLGAFGLTEPGGGSDAGATATRAVPDGDG-WRIRGTKAFITNAGTEITSVITVT 176

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            + G+      +  F+VP        +GL      +K+G  ++ T ++   + +     L
Sbjct: 177 AITGQRDGEKEISSFIVPV-----PSSGLTVSPPYSKVGWHASDTRQVFLDDVYVPADHL 231

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
           LGD             L  LD   ++++ + V LA     EA+ YA  RH  G  +    
Sbjct: 232 LGDRGRGY-----ANFLAILDEGRIAIAALAVGLAQGCLDEALRYAGERHAFGRPIGAFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A  +  A    +  A      K   ++AA       I K +   +A     
Sbjct: 287 AIQFKLADMAARVHTARLAYYDAARRMLAGKPFKDQAA-------IAKLYASDVAVCNAR 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A +  GG+G+I E  +AR +R+  A  + +G G + V
Sbjct: 340 DATQIFGGAGFINETPVARFWRD--AKILEIGEGTSEV 375


>gi|326470196|gb|EGD94205.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326481034|gb|EGE05044.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 539

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 263 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 321

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 322 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 380

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 381 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 434

Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416
            A    SF  L N   + ++  E+AA  R+   I         T  +C + A  +     
Sbjct: 435 EA----SFNWLENLVYQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 490

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 491 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 521


>gi|302557867|ref|ZP_07310209.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302475485|gb|EFL38578.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 40/302 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           +A   T    + W P++ S E              A+G   LTE   G+D  ++T++ ++
Sbjct: 100 IASHGTDEQRESWLPRLASGE--------------ALGCFALTEPGTGSDAGSLTTRAKR 145

Query: 221 ISDGIYCLSGHKWFLSSPM--SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  + + G K F+++    + A       E  V  FLVP         G     +  K
Sbjct: 146 DGDD-WIIDGGKMFITNGTVAAVALTFARTSEKGVTAFLVPT-----DTPGFTATEIHGK 199

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           +G R  AT EL + +        LG+++   G       L  L    +SVS   V LA+ 
Sbjct: 200 LGLRGQATAELTYESVRVPDSARLGEVDRGLGIA-----LGALSRGRISVSAGAVGLAQG 254

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A+ Y+  R   G  +    +++  +AD A+D+  A  L+  +A   D   S  E A
Sbjct: 255 ALDAAVRYSTERAQFGRPIASFQLVQELLADSAVDVQTARLLTHHVARMADAGASPKEYA 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   KY   + A  V    ++  GG G+I+E  + ++ R++   ++  G+    
Sbjct: 315 ----TDASAAKYHASETAVRVSNNCLQVFGGYGFIDEYPVGKYLRDARVLTLYEGTSQVQ 370

Query: 451 VL 452
            L
Sbjct: 371 KL 372


>gi|226361541|ref|YP_002779319.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240026|dbj|BAH50374.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 395

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 40/291 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQ 248
           PM          LTE   G+D+ +IT++  +  DG + LSG K ++ ++P++D  ++LA 
Sbjct: 117 PMLSAEKRCAYALTEPGSGSDLGSITTRAVRSGDG-WVLSGEKIYIHNAPVADFAVVLAV 175

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            +      G +  FLV     D    G+     ++K+G R++    L F +       LL
Sbjct: 176 TDPELGKRGGISVFLV-----DVDQPGVSRAYHEHKMGQRASQVGGLVFDSVRLPSDALL 230

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354
           G+   + G +  MK+L       + +SG+ + ++ A   A  R         +P+     
Sbjct: 231 GEEGKAFGYM--MKVLA---KGRLGISGLSLGISRAALDAATRQSLDRSQFGKPISANQG 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW----CCKMAPA 410
           +  ++A +A ++ A TALS   A + D        AA A  +  + K +    C + A A
Sbjct: 286 ISFSLATVATELRAGTALSVEAARALDTG------AADAETLCSMAKLYASEGCVRHADA 339

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
               A++  GG+G+I    + R YR++    I  G+     L +   + KG
Sbjct: 340 ----AVQVFGGNGFIRGYEVERLYRDARITKIYEGTSEMQRLIISRAVLKG 386


>gi|91791072|ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
 gi|91700953|gb|ABE47124.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
          Length = 381

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 32/306 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M +P +    +P+   R Y P    P+ +      + +TE   G+D+A I ++  +  D 
Sbjct: 96  MASPHLANFGSPEQLQR-YLP----PIIRGEKICAVAVTEPDAGSDVAGIRTRAVREGDE 150

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            + ++G K F+++ +  D + + A+ +    G  G  +   ++E G+P G    R  NK 
Sbjct: 151 -WVINGSKMFITNGVQGDVYFVAAKTDPTAKGSRGISIF--IVEKGTP-GFRVGRALNKS 206

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           G   + T EL F N       LLG+ N   G  + M+      + L +  M  +   + L
Sbjct: 207 GWLCSDTAELVFENCRIPAANLLGEEN--KGFYQIMRNFQNERMVLGAQTMGEAARAIEL 264

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y R R   G  L D+  +++ +A  A  +AAA  L +  A    + +   +E + 
Sbjct: 265 T--LDYVRERKAFGATLWDKQAIRQRLAMRASQVAAARQLVYHAAWLDAQGRECVKEVS- 321

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K  C  +   V+ +  +  GG GY+ E +I R  R++   +I  G+   M+ 
Sbjct: 322 ------MVKALCGNLVNDVVYDCQQFHGGFGYMREAAIERMVRDARVQAIGGGATEVMLE 375

Query: 453 DVLNLL 458
           +V   L
Sbjct: 376 EVAKRL 381


>gi|126455128|ref|YP_001064354.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|167736479|ref|ZP_02409253.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167813557|ref|ZP_02445237.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167843702|ref|ZP_02469210.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167908910|ref|ZP_02496001.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|242317521|ref|ZP_04816537.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|126228770|gb|ABN92310.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242140760|gb|EES27162.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 378

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW   +   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|284163795|ref|YP_003402074.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013450|gb|ADB59401.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 23/292 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           +SM+       + ++W PKI          A  +  SV++   ++E   G+++A I +  
Sbjct: 94  SSMIMEFGDEWMKEEWLPKI----------ADGEIASVSM---ISEPAHGSNVAGIETVA 140

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  D  Y  +G+K W  +  ++D  +++A+     G   +   L +   +G+   ++ N
Sbjct: 141 EKDGDE-YVANGNKMWITNGTVADIGVLMAKTSPGEGHKGITAFLVEMDWDGITTDKIDN 199

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R++   E+   +       ++G+++     + +       + A  +V   + +L  
Sbjct: 200 KLGIRASDLAEVVIDDVRIPEENVIGEVDKGFYQLMEFFAAGRANVAAQAVGAAQGALDA 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YA +R      + +   ++  IA++A  + AA +L++R A   ++     E    A 
Sbjct: 260 AVEYANQREQFDQKIKEFQAIQHKIAEMATKVEAARSLTYRAATQVEQ-----ENQDIAA 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             + + K +  +++  V  E ++  GGSGY+ +    R+YR++    I  G+
Sbjct: 315 QYSSMAKLFASEISVEVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366


>gi|256113639|ref|ZP_05454454.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|265995001|ref|ZP_06107558.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262766114|gb|EEZ11903.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 394

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|255524283|ref|ZP_05391241.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296185242|ref|ZP_06853652.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255511966|gb|EET88248.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296050076|gb|EFG89500.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + +G  Y L+G K F+++  +++ F++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQSTAVLEGDHYILNGSKIFITNGGVAETFVVFAMTDRSKGTKG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E G P G    ++++K+G R+++T EL F +       LLG      G    MK
Sbjct: 181 ISAFVIEKGMP-GFSIGKVEDKLGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LD   + ++   + +AE     A+ Y + R   G  +     ++  IAD+ + + A
Sbjct: 238 T---LDGGRIGIAAQALGIAEGALDAAVAYMKERKQFGKPISAFQGLQWYIADMKVRVEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L F+ A         + +AA A++ A  T  +       V  +A++ +GG GY ++ 
Sbjct: 295 AHYLVFKAAWKKQSDMPYTIDAAEAKLYAAETAMY-------VTTKAVQILGGYGYTKDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 PVERMMRDAKITEIYEGT 365


>gi|167524148|ref|XP_001746410.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775172|gb|EDQ88797.1| predicted protein [Monosiga brevicollis MX1]
          Length = 417

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGRV 253
           L ++E   G+D+ ++  + +   D  Y L+G+K W  + P +D  ++ A+      +  +
Sbjct: 158 LAMSEPGSGSDVVSMRLKAEDKGDH-YVLNGNKFWITNGPDADVLVVYAKTDMAAHQRGI 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FL+ R  E     G    +  +K+G R + T EL F N       +LG++N       
Sbjct: 217 TAFLIERDFE-----GFSSAQKLDKLGMRGSNTCELVFENCKVPKENVLGEVNKGV---- 267

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++  LD   + +SG  + L +A     + Y   R   G  + +  +M+  +AD+   
Sbjct: 268 -YVLMSGLDLERLVLSGGPLGLMQAAMDITLDYVHTREQFGQRIGEFQLMQGKLADMYTR 326

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A  A  + +A   D+ ++  ++ A   +       +  + A  V  +A++C+GG+GYI
Sbjct: 327 LTANRAYVYSVAKKCDQGRADPKDCAGVIL-------YSAEAATQVALDAIQCLGGNGYI 379

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +    R  R++    I  G+G + V
Sbjct: 380 NDYPTGRILRDAKLYEI--GAGTSEV 403


>gi|158422200|ref|YP_001523492.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158329089|dbj|BAF86574.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 380

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 34/313 (10%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+     P     W PK+ + +             +     LTE   G+D AA+ ++ 
Sbjct: 93  AWMIDRFGAPEQRTRWLPKLCAMD-------------IVASYCLTEPGSGSDAAALKTRA 139

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +  D  Y L G K F+S +  SD + ++A+  G     +   L+E G+P GL +   + 
Sbjct: 140 ARDGDH-YVLHGEKQFISGAGASDLYAVMARTGGEGPGGVSTILVEAGTP-GLSFGANEK 197

Query: 278 KIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G R   T       V +   N  G        +   ++  ++ I    A  S+ G + 
Sbjct: 198 KMGWRVQPTRAVIFDGVRVPVENRIGAEGDGFKFAMAGLDGGRLNI----AACSLGGAQA 253

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ Y   R   G  +     ++  +AD+  ++  A    +R A++ D +  ++   
Sbjct: 254 ALDKALAYTAERKAFGKAINQFQALQFRLADMETELEVARTFLWRAASALDRSDPKATR- 312

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                +  + K +       V  EA++  GG GY+ +  + +  R+   + IL G+   M
Sbjct: 313 -----LCAMAKRFVTDAGFEVANEALQLHGGYGYLADYGVEKIVRDLRVHQILEGTNEIM 367

Query: 451 -VLDVLNLLEKGT 462
            V+    L+ +G 
Sbjct: 368 RVIIARGLVARGN 380


>gi|148553747|ref|YP_001261329.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498937|gb|ABQ67191.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 393

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           G  L+EK  G+D+AA+T+  +++  G + ++G K W  +  ++D   + A+     G   
Sbjct: 130 GFALSEKEAGSDVAAMTTSARRVEGG-WIINGEKTWISNGTIADLLTVFARSGEAPGARG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +       +  G       + I     AT+   F   F     LLG+     G    M  
Sbjct: 189 ISAFAFPTATRGFSITERIDVIAPHPLATI--RFDECFVPDDHLLGE--AGQGFKVAMAT 244

Query: 315 LIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L  L S +   ++   R +  EA+  A  R + G  L D  + + A+AD+AL   ++  L
Sbjct: 245 LDMLRSTVGAAALGFARRATDEALGRATSRELFGAPLSDLQLTQAALADMALGNDSSALL 304

Query: 373 SFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +R A + D+ + R + EAA A++ A  T       A   I +A++  GG+G +    + 
Sbjct: 305 IYRAAWAKDQGQPRITREAAMAKLHATDT-------AQLTIDKAVQLFGGAGVVRGNMVE 357

Query: 432 RHYRESPANSILLGS 446
           R YRE  A  I  G+
Sbjct: 358 RLYREIRALRIYEGA 372


>gi|117927618|ref|YP_872169.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648081|gb|ABK52183.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 406

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 19/253 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D AA+T++   + DG  + L G K W  ++  S  + + A  +   G   + 
Sbjct: 140 LSEPEAGSDAAAMTTR--AVRDGEWWVLDGVKRWISNAGESRFYTVFAVTDPDAGTHGIS 197

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318
             + +    GL +   + K+G R + T E+ F+   G  + +  +   P +   + +  L
Sbjct: 198 AFVVEADDPGLSFGPKERKLGIRGSPTREMSFA---GCRIPEWRIIGAPGDGFSLAMRTL 254

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   ++++   V +A+     A+ Y  RR   G  + +   ++  +AD+A+ I AA AL+
Sbjct: 255 DHTRVTIAAQAVGIAQGALDAAVGYTSRREQFGQPVAEFQGVRFTLADMAMRIEAARALT 314

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +       +  Y        K +   +A AV  +A++  GG GY ++  + R 
Sbjct: 315 YVAAAHSERGNG---DLGY---FGAAAKCFASDVAMAVTTDAVQLFGGYGYTQDYPVERM 368

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 369 MRDAKITQIYEGT 381


>gi|291448832|ref|ZP_06588222.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351779|gb|EFE78683.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 381

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  S  +I+LA+  G  G   +  
Sbjct: 124 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLART-GEDGPRGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
            + +    GL +   + K+G  +  T       V +      G   G   ++   +   +
Sbjct: 182 FVVERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L  ++ +   R   GG L+D   ++  +AD+A ++AAA AL 
Sbjct: 242 LGI----AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A + D         A A  +  + K++      +V   A++  GG GY+ E  I + 
Sbjct: 298 RQAAEALD------RNTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKI 351

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 352 VRDLRVHQILEGTNEIM 368


>gi|256375733|ref|YP_003099393.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255920036|gb|ACU35547.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 41/298 (13%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           + T    + W P+  S E             +   +G+TE  GG+D+AA+ +    + DG
Sbjct: 103 LCTEEQKRRWLPRFCSGE-------------LVTAIGMTEPSGGSDLAALKTTA--VRDG 147

Query: 225 I-YCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + L+G K F+++  S   +++A       G  G  L    +E G+P G    R  +K+
Sbjct: 148 SDWVLNGSKTFITNGFSADLVLVAAGTSPDRGARGISLFA--VESGTP-GFERGRKLDKV 204

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G   + T EL FS+       L+G+  V  G    M+ L    L +A+ +++     L E
Sbjct: 205 GQPESDTAELFFSDVRLPADNLVGE--VDRGFAHMMRRLPQERLGAAVSNLAHAAQILVE 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATALSFRLANSFDEAKSRSEEAAY 392
            + Y + R   G  +      K  +A++   +D+  A      LA++  E  +       
Sbjct: 263 TVEYTKERKAFGQSIGSFQANKFTLAELVTKVDVTQAYVDQCVLAHNAGELTA------- 315

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             I A   K+W   +  +V+   ++  GG GY+ E  +AR + ++    I  GS   M
Sbjct: 316 --IDAAKAKFWTADVQNSVLDACVQLHGGYGYMTEYRVARAWMDARVTRIWAGSNEIM 371


>gi|325105307|ref|YP_004274961.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974155|gb|ADY53139.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 591

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 48/290 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     +G  Y ++G K W  +   +D FI+ A++E    +  F+
Sbjct: 144 LTEPNSGSDANSGKTKATLNPEGSHYLINGQKMWITNGGFADIFIVFARIEDDKNLTAFI 203

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R     +  G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 204 VER-----NFGGISMNPEEHKMGIKGSSTRQIFFNDCPVPVENMLSERGNGFKIAVNILN 258

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADI 362
           +           I L +A +  S  R  +  AI+YA  R V  G+ I +   ++  +A++
Sbjct: 259 IGR---------IKLGAATIGSS--RKVIDTAINYANER-VQFGLQISKFGAIRYKLAEM 306

Query: 363 ALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           A    A  + ++R            +A+  D AK++ +      +   I K W  +M   
Sbjct: 307 ATRNFAIESATYRAGQNIDDAYNGLVASGMDSAKAKLKSTEEFAVECAIIKVWGSEMLDY 366

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V+ E ++  GG G+  E  + R YR+S  N I  G+     L ++++L K
Sbjct: 367 VVDEGVQIYGGMGFSAEAPMDRAYRDSRINRIFEGTNEINRLLIVDMLLK 416


>gi|296387009|ref|ZP_06876508.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           aeruginosa PAb1]
          Length = 413

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 34/269 (12%)

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----G 265
           +DG Y +SG K F++    D       ++LA++         +  FLVP++L +     G
Sbjct: 7   ADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVNADGSLG 66

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N L    +++K+G +++AT  + F    G+L+G++N     +  M     L   I  +
Sbjct: 67  EKNSLGCGSIEHKMGIKASATCVMNFDCATGWLVGEVNKGLAAMFTMMNYERLGVGIQGL 126

Query: 326 SGMRVSLAEAIHYARRRHVS----GGILIDQ--------PVMKRAIADIALDIAAATALS 373
           +    S   AI YAR R  S    G +  D+        P ++R +  +        A S
Sbjct: 127 ATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFS 186

Query: 374 FRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             +A   D AK      +R        ++ P+ K +   M         +  GG G+I E
Sbjct: 187 SYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGHGFIRE 246

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
               +  R+     I  G+     LD++ 
Sbjct: 247 WGQEQLVRDCRITQIYEGTNGIQALDLVG 275


>gi|206564033|ref|YP_002234796.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198040073|emb|CAR56054.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 377

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEDNLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A+ I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|118587876|ref|ZP_01545286.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118439498|gb|EAV46129.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 384

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 24/284 (8%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  +       P+ ++  AI    LTE + G+D+A  T       D  Y L G K 
Sbjct: 98  AISLFGTDEQKAEWLPLTRSGKAISAFALTEPQSGSDVANSTMTATDDGDA-YVLDGEKT 156

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEF 291
           W  +  ++D + + A+     G   +   +      G    +RL+  I     AT  L F
Sbjct: 157 WISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDLKGFEVVERLET-IAPHPLAT--LRF 213

Query: 292 SNTFGFLLGDLNVSTGPVEDMKIL-----IYLDSAIMSVSGM-RVSLAEAIHYARRRHVS 345
           +   G  +   N+ + P    +I      I+  +   +  G  R +L EA+     R + 
Sbjct: 214 T---GCRVPKKNMISTPGAGFRIAMSVLDIFRSTVAAAALGFARRALDEALSRVTTREIQ 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWC 404
           G  L D  +++  IAD+ALD+ AA  L +R A + D    R + EAA A++ A       
Sbjct: 271 GSPLFDLQLVQGHIADMALDVDAAALLIYRAAWTKDSGAPRVTREAAMAKLFA------- 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              A  VI +A++  GG G      + + YRE  A  I  G+ +
Sbjct: 324 TDQAQKVIDKAVQLHGGDGVRSGTQVEKLYREIRALRIYEGASD 367


>gi|148658235|ref|YP_001278440.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148570345|gb|ABQ92490.1| butyryl-CoA dehydrogenase [Roseiflexus sp. RS-1]
          Length = 394

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA  +   +  D  Y ++G K W  +   +D  I++A  +   G   +  
Sbjct: 140 LSEPGAGSDAAAQKTTAVRDGDE-YVINGIKNWVTNGDYADTIILMAMTDPSRGHRGITA 198

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            L D    G    ++++K+G RS  + ++ + N   + +          +  KI +  L+
Sbjct: 199 FLVDPHAPGCSIVKVEHKLGIRSAHSCQMAYDN---YRVPAWRRLGEEGQGFKIAMTILN 255

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   V +A+     A+ YA+ R   G  +I+   +   +AD+A  I AA  L++
Sbjct: 256 AGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADMATRIKAARLLTY 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D+       A+ A++ A  T  W          +A++  G +GY +E  + R++
Sbjct: 316 EAAWRKDQHLDFVSAASMAKLYASETAMWTA-------TKAVQVFGSNGYSKEYPVERYF 368

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 369 RDAKITEIYEGT 380


>gi|70731548|ref|YP_261289.1| hypothetical protein PFL_4197 [Pseudomonas fluorescens Pf-5]
 gi|68345847|gb|AAY93453.1| fadE13 [Pseudomonas fluorescens Pf-5]
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 14/264 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTHARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++   +  G+      +K+G RS+ T ++ F N        +    G    M++L + 
Sbjct: 182 SLIMVPMNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIG-HEGAGFMMQMLQFQ 240

Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +      + G+   +   I Y + R   G  LID  V+   +A+++ +I    AL +
Sbjct: 241 EERLFGAANMIKGLEYCVDSTIEYCKERKTFGSPLIDNQVIHFRLAELSTEIECLRALVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +    +   +  +  A+ A++ A        ++   V    ++  GG G++ +  +AR Y
Sbjct: 301 QATEQYVRGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVARAY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+    SI  G+   M+  +  L+
Sbjct: 354 RDVRLVSIGGGADEIMLGIICKLM 377


>gi|154248192|ref|YP_001419150.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162277|gb|ABS69493.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 390

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 40/265 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++ ++  K  D  Y L+G K W  + P+++  ++ A+ +   G    
Sbjct: 131 LAMSEPGAGSDVVSMRTRADKKGD-RYILNGSKMWITNGPIAETLVVYAKTDPAAGPKGM 189

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
             FLV R      P     Q+L +K+G R + T EL F        N  G +   +NV  
Sbjct: 190 TAFLVERDF----PGFSTAQKL-DKLGMRGSDTGELVFQDCEVPEENVLGAVGRGVNV-- 242

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
                  ++  LD     ++G    + +A     + Y   R   G  +    +M+  IAD
Sbjct: 243 -------LMSGLDYERAVLAGGPTGIMQACMDIVLPYVHERKQFGQPIGTFQLMQGKIAD 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + + A  A  + +A + D   +  E+AA A + A     W          EA++ +GG
Sbjct: 296 MYVTMNATKAYVYAVAKACDRGATTREDAAGAILYAAEKATWMA-------LEAIQTLGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GYI +    R  R++    I  G+
Sbjct: 349 NGYINDYPTGRLLRDAKLYEIGAGT 373


>gi|239612853|gb|EEQ89840.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327352018|gb|EGE80875.1| short-chain specific acyl-CoA dehydrogenase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 438

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 21/280 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y ++G K W  +S  +  FI+ A 
Sbjct: 167 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-YKINGSKMWITNSMEAGFFIVFAN 225

Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG 300
           ++   G   +   ++E G+P G    + + K+G R+++T       VE+   N  G    
Sbjct: 226 IDLSKGYKGITAFIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLLGEEGQ 284

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               +   + + +I I      +++ G   + A+ I   RR+   G ++ +   M+  +A
Sbjct: 285 GYKYAINLLNEGRIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVA 341

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +IAAA AL +  A   +  +   ++AA A++       +  ++A  V   A+E +G
Sbjct: 342 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMG 394

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 395 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 434


>gi|239626181|ref|ZP_04669212.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520411|gb|EEQ60277.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales
           bacterium 1_7_47FAA]
          Length = 383

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-S 237
           S E      AP           LTE + G+D A I +    + DG  + ++G K F++ S
Sbjct: 104 SEEQKQKYLAPAATGETLCAFALTEPQSGSDAAQIRTTA--VLDGDEWVINGSKAFITNS 161

Query: 238 PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +  F++ A+ +        +  F+VP     G P G    + + K+ NRS+ +  L F
Sbjct: 162 TYASTFLVAAKTDLEAKGSRGISIFIVPA----GLP-GFEVGKPEEKMSNRSSYSCPLSF 216

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRH 343
           ++       L+G+LN    P+     +  +D   +++S + V +A+ +      Y++ R 
Sbjct: 217 TDVRIPKENLVGELNRGF-PI----FMKCVDDGRVAISAVAVGMAQGVLERAAKYSKERV 271

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +   +   +A++A +I  A A+ +  A   D     S+EA        + K +
Sbjct: 272 TFGHPICENQAIAFKLAEMATEIEVARAMLYNTARMSDNGVPFSKEAT-------MCKMF 324

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           C +M   V    ++ +GG G   E  + R YR+  A  + +G G + +
Sbjct: 325 CSEMCVRVCDMGLQIMGGYGLCNEYEVERFYRD--AKLLTIGEGTSEI 370


>gi|148554682|ref|YP_001262264.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499872|gb|ABQ68126.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 380

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ AI +  +++ D  Y ++G K ++++   +D  I+ A+ +  +G   +
Sbjct: 126 IAMTEPATGSDLQAIRTTARRVGD-RYVINGAKTYVTNGQNADVVIVAAKTDPGLGARGL 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             +L D    G    R  +KIG  S  T EL F++               F +L+  L  
Sbjct: 185 SLILVDADTPGFARGRNLDKIGLWSADTSELFFNDVEVPVANRLGEEGRGFAYLMSQL-- 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      A  + +  + +  EA+ + + R   G  + +    K  +AD+  
Sbjct: 243 ---PQERLSI------ATSAQAAAQRAFDEALAFVKDRTAFGQPIFEFQNTKFTLADMKS 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +    A         D A  R    A     A   K W   M   +   A++  GG+GY
Sbjct: 294 QLQVGWA-------HLDWAIRRHIAGALTTAEASAAKQWHSDMQGRITDMALQLHGGAGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  IAR +R++    I  G+   M
Sbjct: 347 MNEYLIARLWRDARVTRIFGGTNEIM 372


>gi|33595354|ref|NP_882997.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565431|emb|CAE36240.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 408

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D   + ++ + ++ G Y LSG K W  +SP++D F++ A+ + G +  F+
Sbjct: 146 FGLTEPDHGSDPGGMATRARGVAGG-YRLSGAKSWITNSPIADVFLIWAKDDAGDIRGFI 204

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           + R ++     GL  +R+  K   R++ T  +     F     +L  +    GP      
Sbjct: 205 LDRGMQ-----GLSTERIDGKFSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFS---- 255

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A + +S   +  AEA +H AR     R   G  L    ++++ +AD+  +IA  
Sbjct: 256 --CLNKARLGISWGALGAAEACLHQARDYVLARTQFGRPLASNQLVQKKLADMETEIAIG 313

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S ++A   D+ +  +E  +       I K   C  A  +   A + +G +G  +E  
Sbjct: 314 LQASLQVARLMDQGRVSTEAIS-------IIKRNNCGKALEISRVARDMLGANGVSDEYH 366

Query: 430 IARH 433
           I RH
Sbjct: 367 IIRH 370


>gi|311103624|ref|YP_003976477.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758313|gb|ADP13762.1| acyl-CoA dehydrogenase, N-terminal domain protein 2 [Achromobacter
           xylosoxidans A8]
          Length = 382

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 32/265 (12%)

Query: 187 NKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI 244
           N  P   +   IG   LTE   G+D  A+     +  D  Y L+G K +++ +P++  F 
Sbjct: 108 NYLPKLASGELIGSFALTEPDAGSDAMALRLSAVRDGDS-YVLNGTKRYITNAPIAGLFS 166

Query: 245 MLAQV--EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           ++A+   E R   + CFLV    E G+P GL   +   K+G     T ++ F N      
Sbjct: 167 VMARTAPERRANSISCFLV----EAGTP-GLTIGKPDKKMGQAGALTSDVVFDNCRVPAS 221

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
            LLG      G    M++L   D   + +S + V +A+     A+ YA  R   G  + +
Sbjct: 222 ALLGG-EEGNGFRTSMRVL---DKGRLHISALCVGIADRLLSDAVKYAIERKQFGQPIAE 277

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  IAD   ++ AA  +    A   D  ++ + +AA         K +  +M   V
Sbjct: 278 FQLIQAMIADSQAELYAARCMVLDAARMRDRGENTTMQAA-------CCKLYATEMVGRV 330

Query: 412 IAEAMECIGGSGYIEERSIARHYRE 436
              A++  GG+GY+ E ++ R YR+
Sbjct: 331 ADRAVQIHGGAGYMSEYAVERFYRD 355


>gi|254387925|ref|ZP_05003162.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294817475|ref|ZP_06776117.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326446194|ref|ZP_08220928.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|197701649|gb|EDY47461.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322290|gb|EFG04425.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 382

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  +G + LSG K F+S +  S  ++++A+  G     +   
Sbjct: 125 LTEPGAGSDAAALATRAVRDGEG-WVLSGVKQFISGAGASQLYVVMARTGGEGAAGVSAF 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
           L+E   P G+ +   + K+G  +  T       V L      G       ++   +   +
Sbjct: 184 LVEKDDP-GVGFGPDERKMGWNAQPTRQVVLDGVRLPADRLLGREGEGFRIAMNGLNGGR 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G R +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL 
Sbjct: 243 LGI----AACSLGGARSALDRSLTHLADREAFGRRLLDADALRFRLADMATELAAARALV 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A + D       +A Y   MA   K +       V   A++  GG GY+ E  I + 
Sbjct: 299 QQAAQALDRGDP---QAPYLCAMA---KRFATDTGYTVADRALQLHGGYGYLSEYGIEKI 352

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 353 VRDLRVHRILEGTNEIM 369


>gi|167576791|ref|ZP_02369665.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 383

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTAARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGHGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           AR YR++   SI  G+   M+
Sbjct: 350 ARTYRDTRLFSIGGGADEVML 370


>gi|33599653|ref|NP_887213.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567250|emb|CAE31163.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 408

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D   + ++ + ++ G Y LSG K W  +SP++D F++ A+ + G +  F+
Sbjct: 146 FGLTEPDHGSDPGGMATRARGVAGG-YRLSGAKSWITNSPIADVFLIWAKDDAGDIRGFI 204

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           + R ++     GL  +R+  K   R++ T  +     F     +L  +    GP      
Sbjct: 205 LDRGMQ-----GLSTERIDGKFSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFS---- 255

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A + +S   +  AEA +H AR     R   G  L    ++++ +AD+  +IA  
Sbjct: 256 --CLNKARLGISWGALGAAEACLHQARDYVLARTQFGRPLASNQLVQKKLADMETEIAIG 313

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S ++A   D+ +  +E  +       I K   C  A  +   A + +G +G  +E  
Sbjct: 314 LQASLQVARLMDQGRVSTEAIS-------IIKRNNCGKALEISRVARDMLGANGVSDEYH 366

Query: 430 IARH 433
           I RH
Sbjct: 367 IIRH 370


>gi|86137609|ref|ZP_01056186.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85825944|gb|EAQ46142.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 386

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 121/261 (46%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G       +K+G R + T EL F +    F  +LG+        + +K+L
Sbjct: 187 TAFIIEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLGEEG------KGVKVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   + E + Y + R   G  + +  +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGTGIMAACMDEMMPYLKERKQFGQPIGNFQLMQGKIADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425
            A  + +A + D+     ++AA            CC    + A     +A++ +GG+GY+
Sbjct: 301 RAYIYEVAKACDKGTVTRQDAAA-----------CCLYASEQAMVQAHQAVQALGGAGYL 349

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R +R++    I  G+
Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370


>gi|89894464|ref|YP_517951.1| hypothetical protein DSY1718 [Desulfitobacterium hafniense Y51]
 gi|219668889|ref|YP_002459324.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|89333912|dbj|BAE83507.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539149|gb|ACL20888.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 389

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D +++ +  ++  D  Y ++G K F+S+   +  + +LA  +   G   +
Sbjct: 123 FALTEPNSGSDASSLVTTAKRRGDH-YVINGSKRFISNTGYAGIYTVLASTDRTKGSRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED------- 311
              L D    GL   + + K+G   ++T EL F         D+ V   PVE+       
Sbjct: 182 TAFLVDADTPGLIIGKKEKKMGLHGSSTRELIFE--------DMVV---PVENRLGEEGQ 230

Query: 312 -MKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364
             KI +  LD   + +    V +A+A   A   +    +   Q +M     +  +AD+A 
Sbjct: 231 GFKIAMALLDDGRIGIGAQAVGIAQAAFEAALAYAQERVQFKQEIMNFQGIQFMLADMAA 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L ++ A    E    S+EA+ A++       +  +MA  V  +AM+  GG GY
Sbjct: 291 QLEAARLLVYQAAVRRVEGVPYSKEASMAKL-------FASEMAVKVTNDAMQIFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  I R+ R++    I  G+
Sbjct: 344 TREYPIERYLRDAKITQIYEGT 365


>gi|311896917|dbj|BAJ29325.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 42/299 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           T    + W P   S E             +   + +TE   G+D+A I +  +  +DG  
Sbjct: 104 TEEQKRRWLPGFVSGE-------------IMTAIAMTEPGAGSDLAGIATTAKLSADGTH 150

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y L+G K F++   ++D  +++ +       + R G  +   L  D +  G    R   K
Sbjct: 151 YVLNGAKTFITGGVLADLVLVVCRTAPYDPADRRAGLSI---LCVDTASEGYTVGRKLQK 207

Query: 279 IGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           IG R++ T EL FS+       LLG+     +  T  +   ++ I + +   + + +R  
Sbjct: 208 IGLRTSDTAELSFSDVKVPVENLLGEEGRAFSYLTHNLVQERLAIAVGAYASAAAAVRF- 266

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ Y + R V G  + +    K ++AD    + A  A+  +    +   +    +AA
Sbjct: 267 ---AVQYVKERKVFGKAVAEFQNTKFSLADCQAQVLAQQAMVDQALELYQSGELTVADAA 323

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A++       +C + A  VI + ++  GG GYI E  IAR Y ++    I  G+   M
Sbjct: 324 AAKL-------FCTESASEVIDKCLQLHGGYGYILEYPIARLYTDNRVFRIYGGTSEVM 375


>gi|148653334|ref|YP_001280427.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572418|gb|ABQ94477.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 398

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 34/317 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S +++ ++  +H  WA   +  E       P   T   +G  GLTE   G+D  ++ ++ 
Sbjct: 104 SAMSVQSSLVMHPIWA---YGTEAQKEKYLPKLATGEYVGCFGLTEPDAGSDPGSMKTRA 160

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +K+ DG Y L G K W  +SP++D F++ A+  EG +  F++ + ++     GL   +++
Sbjct: 161 KKV-DGGYQLKGSKMWITNSPIADVFVVWAKDDEGEIRGFVLEKGMK-----GLSAPKIE 214

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K   R++ T E+   + F        D+    GP         L+ A   ++   +  A
Sbjct: 215 GKFSLRASITGEIVMDDVFVPEENAFPDIRGLKGP------FGCLNKARYGIAWGSMGAA 268

Query: 334 EAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E    A R++       ++P     +++  +AD+  +IA     + R+    DE  +  E
Sbjct: 269 EFCWKAARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAALRVGRLMDEHNAAPE 328

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  M  + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +
Sbjct: 329 -------MISLIKRNNCGKALNIARVARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHD 381

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 382 VHAL-ILGRAQTGIQAF 397


>gi|302521675|ref|ZP_07274017.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|318057649|ref|ZP_07976372.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. SA3_actG]
 gi|333024683|ref|ZP_08452747.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|302430570|gb|EFL02386.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|332744535|gb|EGJ74976.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 21/264 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+       + 
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGTHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R G  L   L+ D    G    R  +K+G +++ T EL F++       LLG+ N     
Sbjct: 184 RFGISL---LVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVKVPVADLLGEENKGFAY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+ + +    ++  A  Y + R V G  +      K  +A    ++ A
Sbjct: 241 LGQNLPQERLGIAVGAYAQAAAAVRFAQQYVQDRTVFGKPVAAFQNTKFELAACKAEVDA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+  R   + D+ +  + EAA A++       +C ++A  VI   ++  GG GY+ E 
Sbjct: 301 AEAVCDRALEAHDKGELTAAEAASAKL-------FCTEVASRVIDRCLQLHGGYGYMNEY 353

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            IAR Y ++  N I  G+   M +
Sbjct: 354 PIARLYADNRVNRIYGGTSEVMKM 377


>gi|240274657|gb|EER38173.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
 gi|325090994|gb|EGC44304.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 437

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y ++G K W  +S  +  FI+ A 
Sbjct: 166 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTPSG-YKINGSKMWITNSIEAGFFIVFAN 224

Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++   G   +   ++E G+P G    + + K+G R+++T  L F +     +   N+   
Sbjct: 225 LDPSKGYKGITAFMVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 280

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIA 360
             +  K  I  L+   + ++     LA       A +    R   G ++ +   M+  +A
Sbjct: 281 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVA 340

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +IAAA AL +  A   +  +   ++AA A++ A        ++A  V   A+E +G
Sbjct: 341 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKLYA-------SQVAGRVAGSAVEWMG 393

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 394 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 433


>gi|114800043|ref|YP_759627.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114740217|gb|ABI78342.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 48/282 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++  K  D  Y ++G K F+S +  SD ++++A+        +   
Sbjct: 124 LTEPGSGSDAASLKTKAVKEGDD-YVITGTKQFISGAGTSDVYVLMARTSDDGAKGVSAF 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLNVST 306
           ++E  +P GL +   + K+G +S  T ++              E  + F F +  L+   
Sbjct: 183 IIEKDTP-GLSFGANERKMGWKSQPTRQVILDGVRVPAANRIGEEGHGFRFAMAGLDGGR 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L+ A  ++ G +++L +A+ YA+ R   G  L +    +  +AD+  ++
Sbjct: 242 -----------LNIAACALGGAQLALDKAVVYAKERRQFGKALAEFQNTQFKLADMETEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC-------KMAPAVIAEAMECI 419
            AA  + +  A   D               AP    WC          A  V  +A++  
Sbjct: 291 QAARVMLYEAAGRLDRK-------------APDATRWCAMAKRFVTDTAFKVANDALQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY+ +  + R  R+   + IL G+   M + +   + KG
Sbjct: 338 GGYGYLADYHVERIVRDLRVHQILEGTNEVMRVIISRDMLKG 379


>gi|83717376|ref|YP_438490.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167614960|ref|ZP_02383595.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257141540|ref|ZP_05589802.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651201|gb|ABC35265.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 383

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTAARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGHGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           AR YR++   SI  G+   M+
Sbjct: 350 ARTYRDTRLFSIGGGADEVML 370


>gi|289662987|ref|ZP_06484568.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 391

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWAHTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E  SP G   Q + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 196 ----ETYSP-GFSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQA 250

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L
Sbjct: 251 RYGIAWGAIGAAVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +    R E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 311 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|254820007|ref|ZP_05225008.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 380

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P I S E             + + + +TE   G+D+A I +   +  D  + ++G K 
Sbjct: 111 WLPGIISGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKT 156

Query: 234 FLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+SS ++ D  +++ + +   G      L+ +    G    R   K+G     T EL F 
Sbjct: 157 FISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQDTAELAFE 216

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           N               F  L+ +L     P E + I      AI +++G R +  + + Y
Sbjct: 217 NVRVPSANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETWRQTLQY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +      +  +A++  ++        R   +  + +  + EA+ A     
Sbjct: 266 AKDRKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLQAVVDGELTAVEASKA----- 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             K+WC + A  VI   ++  GG GY+ E  +AR Y ++   +I  G+   M
Sbjct: 321 --KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370


>gi|54294711|ref|YP_127126.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens]
 gi|53754543|emb|CAH16027.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens]
          Length = 389

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  Q +   D  Y L G
Sbjct: 115 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 159

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  + P +D  ++ A+ + + G   +   ++E G P     Q+L +K+G R + T E
Sbjct: 160 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 218

Query: 289 LEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           L F        N  G +   + V    ++  + ++    A   V  M+  +   + Y   
Sbjct: 219 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 274

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      + +   ++  +AD+  D+ A  A  + +A + D  +   ++AA   +      
Sbjct: 275 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  ++++ +GG+GYI E    R  R++    I  G+
Sbjct: 329 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 372


>gi|330826037|ref|YP_004389340.1| glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311409|gb|AEB85824.1| Glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 398

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 114 FGSEAQKQKYLPRLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172

Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A +VE       +   + D    GL    +  K+G R++ T E+   + F
Sbjct: 173 SPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 233 VPEENAFPEIRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C  
Sbjct: 287 PLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365


>gi|326435835|gb|EGD81405.1| isovaleryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 429

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + Q+  D  Y L+G+K W  + P +D  ++ A+ +       +
Sbjct: 170 LAMSEPGSGSDVVSMQLRAQEDGDS-YVLNGNKFWITNGPDADVLVVYAKTDMSAHQHGI 228

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             FLV +  E     G    +  +K+G R + T EL F N       +LG++N       
Sbjct: 229 TAFLVEKDFE-----GFSTAQKLDKLGMRGSNTCELVFENCRVPKENVLGEVNKGV---- 279

Query: 311 DMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++  LD   + ++G     M+ ++  +  Y   R   G  +    +M+  +AD+   
Sbjct: 280 -YVLMSGLDLERLVLAGGPLGLMQAAVDVSFDYVHERKQFGKPIGTFQMMQAKLADMYTT 338

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++A  A  + +A   D+    S++ A   +       +  + A  V  +A++C+GG+GYI
Sbjct: 339 LSANRAYVYSVAKKCDKGIVESKDCAGVIL-------YSAEAATKVALDAIQCLGGNGYI 391

Query: 426 EERSIARHYRESPANSILLGS 446
            +    R  R++    I  G+
Sbjct: 392 NDYPTGRIMRDAKLYEIGAGT 412


>gi|256111872|ref|ZP_05452833.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
          Length = 322

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 26/229 (11%)

Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272
           + DG  Y L+G K F++ +P++D F ++A+    V+G  G   F+V R     SP GL  
Sbjct: 79  VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 133

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327
            +   K+G +   T  + F N       L+G +    G    MK+L    L  A +S   
Sbjct: 134 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 192

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  ++ S
Sbjct: 193 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 252

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EA+ A++ A        +M   V    ++  GG+GY+ E +I R YR+
Sbjct: 253 TEASCAKMFA-------TEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 294


>gi|257791606|ref|YP_003182212.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|257475503|gb|ACV55823.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
          Length = 379

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR 252
           I   LTE   G+DI+AI++      DG Y ++G K F+++  + D F + A+V    + +
Sbjct: 119 ICFALTEPNAGSDISAISTTALPDGDG-YTINGGKIFITNGAVGDWFTVFARVVEDGQSK 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             CF+V R     +P GL   R ++K+G R + T +L F N     +G   V  G V D 
Sbjct: 178 PSCFIVHRY----TP-GLVIGRKEDKMGLRGSVTSQLYFENMH---VGPEAV-VGEVGDG 228

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALD 365
             + +  L+   ++V+ +   +  A   A     + R   G  + D   ++  +AD+ + 
Sbjct: 229 FAIAHHTLNRGRLAVAALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEIT 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  L  + A++F        +       A + K +C + A      A++  GG G  
Sbjct: 289 LEASRLLLDQAASAF------GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLC 342

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R+YR++ + +I+ G+
Sbjct: 343 KDYPVERYYRDAKSFTIVEGT 363


>gi|254284235|ref|ZP_04959203.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680438|gb|EED36787.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 367

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 116/251 (46%), Gaps = 14/251 (5%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           DI  +++  Q +++G+  ++G+K ++S+  ++D FI+ A++EG++  FLVP+  E     
Sbjct: 128 DIDNLSAHAQHVANGLK-ITGNKAYISAGAVTDYFIVTAKLEGQLALFLVPKDAE----- 181

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           GL   R K   G RS A +  +    F  L+   +++      M+    L ++  ++  M
Sbjct: 182 GLTVTRYKTYDG-RSAANLAFDMELPFSSLMARGDLARSAFMTMRDRAILGASAEALGAM 240

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L   + Y R+R   G  L     ++  +A++ + I    +L      + D   + SE
Sbjct: 241 QAALDTTVDYTRQRVQFGKPLSSFQALQHRMANMLIQIELCRSLVGAACRALD---AGSE 297

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +   AR +    K      A  V  EA++  GG    +E  +  +++   A    + S  
Sbjct: 298 D---ARRLTLAAKVKVTSTARKVTQEAIQLHGGIATTDEYVVGHYFKRVTALESWVCSRE 354

Query: 449 AMVLDVLNLLE 459
             ++D + L +
Sbjct: 355 DALVDFIRLTD 365


>gi|75674806|ref|YP_317227.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74419676|gb|ABA03875.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 404

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + S+ +K+SDG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKSRAEKVSDG-YRLTGSKTWISNAPIADLFVVWARSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 F----VLEKGM-KGLSAPKIGGKLSLRASVTGEIVMDGVVVPEENLLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR----RRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S G+  +  + +H AR     R   G  L    ++++ +AD+  DIA
Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARTYVLERKQFGRPLAAAQLVQKKLADMQTDIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+    DE +   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQATLRIGRLMDEGRMTPE-------MISIIKRNNCGKALDIARAARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|89895064|ref|YP_518551.1| hypothetical protein DSY2318 [Desulfitobacterium hafniense Y51]
 gi|89334512|dbj|BAE84107.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 424

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 25/286 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV--EG----RVG 254
           LTE RGG+D    T+  ++  D +Y L+G K F+  +  +D F++ A+   EG     + 
Sbjct: 139 LTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKTDPEGPAHQSIS 197

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R      P G+  + +   +G R      + F +       LLG  N +      
Sbjct: 198 AFIVDR-----GP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGAADIFYQ 251

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M I   L SA  ++   R +L  A  Y+ RR   G  + D   +   +AD    + AA +
Sbjct: 252 MMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITRLDAARS 311

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A + D           AR +    K +    A AV+ + M+ +GG GY     I 
Sbjct: 312 LVYTTARAVDSGVP----GHVARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYTNVFPIE 367

Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
           R  R+     I  G+   M L + +    E+  NL  Q   +LE+D
Sbjct: 368 RLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNL--QFHRSLEED 411


>gi|332535048|ref|ZP_08410862.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035517|gb|EGI72012.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 391

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +   ++ A+ +   G   +
Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDAHTLVIYAKTDLNAGAKGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + +  G    +  +K+G R + T EL F N       +LG+LN      E +K+L
Sbjct: 191 TAFIVESNFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244

Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
           +  LD   ++  +G    M+  +   + Y   R        D P+     ++  +AD+  
Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY
Sbjct: 300 QMNAARSYVYTVAKACDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E +  R  R++    I  G+
Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374


>gi|320353823|ref|YP_004195162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
 gi|320122325|gb|ADW17871.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 386

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 59/295 (20%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI S EY             A   GLTE   G+D + + +   K  D  Y L+G K 
Sbjct: 111 YIPKICSGEY------------AAGSFGLTENCAGSDPSGMCTTATKDGDS-YVLNGSKI 157

Query: 234 FLSS-PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           F++S P +  F++ A  +        + CFL+    E G+P GL   + ++K+G  ++AT
Sbjct: 158 FITSAPYAGVFVVWAVTDKEAPRGKGISCFLI----EAGTP-GLTIGKEEHKMGQHASAT 212

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR------------VS 331
            EL F N       ++G       P +  +I      A+  ++G R             +
Sbjct: 213 NELIFDNCRVPASAMMGK------PNDGFRI------AVAELAGGRIGIGSLGLGIGLAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  A  YA  R      + +   ++  IAD   ++ AA  L    A   ++ +  ++EA+
Sbjct: 261 MDYAAKYANERQQFCQKISNFQAIQWMIADSYTELEAARLLLMNAAFRKEQGRPFAKEAS 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A++ A  +    C         A++ +GG GY ++  I R+ R++   +I  G+
Sbjct: 321 MAKMYATESANRACY-------NALQMLGGYGYTKDFPIERYARDARITTIYEGT 368


>gi|294633092|ref|ZP_06711651.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830873|gb|EFF89223.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 598

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 47/322 (14%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E   T   PM +      + L+E + G+ +A + ++ +   DG Y L G+K ++S   
Sbjct: 142 SSEQIDTYVRPMVEGRFTGTMCLSEPQAGSSLADVRTRAEPAGDGAYRLFGNKMWISGGD 201

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRS 283
            +       ++LA++ G       +  F+VP+ L   DG+P   N +    L +K+G R 
Sbjct: 202 HELTENIVHLVLARIPGGPPGVKGLSLFIVPKYLVGPDGTPGERNDVVLAGLNHKMGYRG 261

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLA-------- 333
                L F    GF  G    + G +  E  + L Y+   +M+ + + V L         
Sbjct: 262 TTNTLLNFGEG-GFRPGGAPGAVGHLVGEPHRGLAYM-FHMMNEARIGVGLGATALGYTG 319

Query: 334 --EAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              A+ YAR R     +           +I+   ++R +      +  A AL        
Sbjct: 320 YLHALDYARTRPQGRPVTAKDAAAPQVPIIEHADVRRMLLAQKSYVEGALALILYCGRLL 379

Query: 381 DEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DE ++ + E    R      ++ PI K W  +        A++  GG GY  E  + + Y
Sbjct: 380 DEQRTAATEQERDRARLLLDVLTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYDVEQFY 439

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++  N I  G+     LD+L 
Sbjct: 440 RDNRLNPIHEGTHGIHGLDLLG 461


>gi|228942802|ref|ZP_04105323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975661|ref|ZP_04136202.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228784049|gb|EEM32087.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228816862|gb|EEM62966.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 397

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   + C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   + D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|167579313|ref|ZP_02372187.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 378

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW  ++   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|311747232|ref|ZP_07721017.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578944|gb|EAZ83108.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 398

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + + +  + + D  Y L+G K W  +SP +D  ++ A+  EGR+   +
Sbjct: 142 FGLTEPDHGSNPSGMVTNFKDMGD-YYLLNGAKMWISNSPEADIAVVWAKNEEGRIHGLI 200

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++ T EL F N       LL + +    P      
Sbjct: 201 VERGME-----GFTTPTTHNKWSLRASCTGELVFDNVKVPKENLLPNKSGLGAP------ 249

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L+ LDSA   ++   +  A   + + R++ +  I  D+P+     +++ ++++  +I  A
Sbjct: 250 LMCLDSARFGIAWGAIGAAMDCYESARKYAAERIQFDKPIASFQLVQKKLSEMLTEITKA 309

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++++    +E K+++       +   + K    +MA  +  EA +  GG G   E  
Sbjct: 310 QLLAWKVGKMMNEGKAKT-------VHISMAKRNNVEMALNIAREARQIHGGMGITGEYP 362

Query: 430 IARH 433
           I RH
Sbjct: 363 IMRH 366


>gi|219669475|ref|YP_002459910.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219539735|gb|ACL21474.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 412

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 25/286 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV--EG----RVG 254
           LTE RGG+D    T+  ++  D +Y L+G K F+  +  +D F++ A+   EG     + 
Sbjct: 127 LTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKTDPEGPAHQSIS 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R      P G+  + +   +G R      + F +       LLG  N +      
Sbjct: 186 AFIVDR-----GP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGAADIFYQ 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M I   L SA  ++   R +L  A  Y+ RR   G  + D   +   +AD    + AA +
Sbjct: 240 MMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITRLDAARS 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A + D           AR +    K +    A AV+ + M+ +GG GY     I 
Sbjct: 300 LVYTTARAVDSGVP----GHVARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYTNVFPIE 355

Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
           R  R+     I  G+   M L + +    E+  NL  Q   +LE+D
Sbjct: 356 RLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNL--QFHRSLEED 399


>gi|217968850|ref|YP_002354084.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506177|gb|ACK53188.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 378

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
             +TE   G+D+A I ++ +++  G Y L+G K W  ++ +++  ++ A+     G    
Sbjct: 121 FAMTEPGAGSDVAGIRTRAERVEGG-YRLTGSKIWISNANLAEFCVVFAKTAPDGGHRGM 179

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVST 306
             F+VPR     +  GL       K+G R + T E+     F       G   G   ++ 
Sbjct: 180 SAFIVPR-----ASAGLTVGEPLGKLGQRCSPTCEVFLDQVFVPEDHRLGEEGGGFALAM 234

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  + ++    A   V  +   L E++ YA +R   G  LID   +   +A++ + +
Sbjct: 235 AVFDHSRPMV----AAFGVGLIERCLDESLAYATQRSSMGKRLIDHQAVAHKLAEMRMKL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+++ A   D+ +  + EA+       I K +    A     EA++  GG GY  
Sbjct: 291 EAARLLTYQSAWLLDQGRPNTIEAS-------IAKAFAADAAMWAATEAVQIFGGMGYST 343

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + + +R++    I  G+
Sbjct: 344 EYPVEKLFRDAKVLQIYEGT 363


>gi|110681089|ref|YP_684096.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109457205|gb|ABG33410.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 407

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K   G Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTPTG-YKLTGSKMWISNSPIADVFVVWAKSEAHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++ NK+  R++ T E+           LL ++    GP    
Sbjct: 208 FILEKGMK-----GLSAPKVGNKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   RH  G  +    + ++ +AD+  +IA
Sbjct: 259 --FGCLNRARYGISWGVMGAAEFCWHAARQYGLDRHQFGKPIAGTQLFQKKLADMQTEIA 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S ++    D A++  E       M  I K   C  A  V   + +  GG+G   E
Sbjct: 317 LGLQGSLQVGRLMDSAQAAPE-------MISIMKRNNCGKALDVARMSRDMHGGNGISGE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVIRH 375


>gi|327297831|ref|XP_003233609.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326463787|gb|EGD89240.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 540

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 322

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435

Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416
            A    SF  L N   + ++  E+AA  R+   I         T  +C + A  +     
Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522


>gi|301512949|ref|ZP_07238186.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB058]
          Length = 372

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDNHYLLNGAKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|149914733|ref|ZP_01903263.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149811526|gb|EDM71361.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 380

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 28/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++  + ++G Y L+G K F+S    SDA+I++ +   +G  G   +
Sbjct: 124 LTEPGSGSDAAALKTRAGRSNEG-YILNGTKAFISGGGYSDAYIVMVRTGEDGPRGISTI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              +EDG+P GL +  L++K+G RS  T +++F         ++       E+ K   Y 
Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWRSQPTAQVQFDEC------NIPAQNLVGEENKGFSYA 233

Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+ A  S+   + +L   + Y   R   G  +     ++  +AD+ + + AA
Sbjct: 234 MAGLDGGRLNIAACSLGAAQQALDMTLTYMGERKAFGKPIDQFQALQFRLADLEIQLQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                + A   D        A  A     + K +  +    ++ + ++  GG GY+ +  
Sbjct: 294 RTFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSNIVNQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           I +  R+   + IL G+   M L V
Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372


>gi|172063916|ref|YP_001811567.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171996433|gb|ACB67351.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 377

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A  I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|108799585|ref|YP_639782.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119868695|ref|YP_938647.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770004|gb|ABG08726.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119694784|gb|ABL91857.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 611

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 48/299 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  + SDG + ++G K F+S   + D       ++LA+ +G    
Sbjct: 164 LTEPDAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
              +  F VP+ L D       S NG+    +++K+G +S+ T E+ F       G+L+G
Sbjct: 224 TKGLSMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGRDQPAIGWLVG 283

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--------- 349
           D  V  G  +  K++    + + +MS   +      A+ YA+ R + G  L         
Sbjct: 284 D--VHNGIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTR-IQGPDLTRTSDKTAP 340

Query: 350 ----IDQPVMKRAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396
               I  P ++R++      A+    +   TA+          + S +E    A+I   +
Sbjct: 341 RVPIIRHPEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLL 400

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            P+ K    + A   +  +++  GGSGY+++  + ++ R+   N++  G+      D+L
Sbjct: 401 LPVVKAVSSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLL 459


>gi|17989368|ref|NP_542001.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|17985240|gb|AAL54265.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
          Length = 456

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%)

Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272
           + DG  Y L+G K F++ +P++D F ++A+    V+G  G   F+V R     SP GL  
Sbjct: 213 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 267

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327
            +   K+G +   T  + F N       L+G +    G    MK+L    L  A +S   
Sbjct: 268 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 326

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  ++ S
Sbjct: 327 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 386

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EA+ A       K +  +M   V    ++  GG+GY+ E +I R YR+
Sbjct: 387 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 428


>gi|330820005|ref|YP_004348867.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327372000|gb|AEA63355.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 377

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+S+     ++  F M    +G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLQDGRWVLNGSKQFISNASRAGVAIVFAMTDPEQGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + + K+G R++ T  +   N     + + N+     E +KI 
Sbjct: 184 FIVP----TDTP-GFNVGKPEKKLGIRASDTCPITLENC---AIPEENLLGARGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   V +A A     RR+ +      +P+     +   +AD+A  + AA
Sbjct: 236 LANLEGGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIKEHQAIAEKLADMATQLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A    E      EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAARLRTEGLPCLSEASQAKLFAS-------EMAEKVCSDAIQVHGGYGYLADYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|239983589|ref|ZP_04706113.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 922

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 21/244 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D  +++++ ++   G + + G K F+++  ++D  ++ A+  E  +  FLVP
Sbjct: 664 LTEPGTGSDAGSVSTRARR-DGGDWVIDGAKIFITNGTVADVALVFARTGEKGLTAFLVP 722

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318
                 SP G     +  K+G R  AT EL      G  + D          + I L  L
Sbjct: 723 ----TDSP-GFTATEIHGKLGLRGQATAELTLE---GVRVPDTARLGEEGRGLGIALGTL 774

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +SV+   V LA+     A+ YA+ R   G  +    +++  +AD  +D+  A  L+
Sbjct: 775 SRGRISVAAGAVGLAQGAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLLT 834

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A   D   S  E A  A +     KY   + A  V    ++  GG GYI+E  + ++
Sbjct: 835 HQVARMADAGASPKEYATDASV----AKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGKY 890

Query: 434 YRES 437
            R++
Sbjct: 891 LRDA 894


>gi|227539772|ref|ZP_03969821.1| possible acyl-CoA dehydrogenase, long-chain specific
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240414|gb|EEI90429.1| possible acyl-CoA dehydrogenase, long-chain specific
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 187

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 18/156 (11%)

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           FG+L+G L +             L +AI S+S    +L   + Y  +R   G  L+D  V
Sbjct: 31  FGYLMGGLQLER-----------LTAAIQSISTADSALQYTLAYIDKREAFGKKLMDFQV 79

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +  DIA   A  +   +         +   YA     I K    ++A  ++ E
Sbjct: 80  LRHRIAQMVADIATTKAFVYHCCD-------LQQRGDYAVQECSIAKLQSSELAIKIVHE 132

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG G+ E+  I+R YR+    +I+ G+   M
Sbjct: 133 CLQLFGGYGFTEDYKISRLYRDVRVGTIIGGTSEIM 168


>gi|113866203|ref|YP_724692.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113524979|emb|CAJ91324.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 376

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  Y L+G K F++S   +D  I+LA 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-YVLNGVKQFITSGQNADVAIVLAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      F+VP      S  G    RL++K+G  S+ T ++ F       +N  G
Sbjct: 170 TDKAAGKRGISAFIVPT-----STPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
              G   ++   +E  +I I    A  S+   R +   A+ YA+ R   G  L     ++
Sbjct: 225 DEGGGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +  A   D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHAAALRDAGRPCLKEAAMAKLFA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|163846607|ref|YP_001634651.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524403|ref|YP_002568874.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667896|gb|ABY34262.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448282|gb|ACM52548.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 389

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 37/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF--LV 258
           LTE   G+D A I +  ++  D  + ++G K W  +   +D  ++ A  +  +G    + 
Sbjct: 125 LTEPNAGSDAAHIQTTAERRGDE-WVINGQKMWITNGSFADVIVVFAATDKNLGARGGIT 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILI 316
             ++E   P G    +++ K+G R++ T  L F         D  V   P E++  ++ +
Sbjct: 184 AFIVEKTMP-GFRVGKVEEKMGLRASHTASLYFE--------DCRV---PAENVLGQVGM 231

Query: 317 YLDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAIADIAL 364
               A+ ++   R  L         EA   +RR    RH  G  + +   ++  +AD+A+
Sbjct: 232 GFPLAMRTLDIGRCGLGASSIGSAKEAFELSRRYMVERHQFGRPIAEFQALQFKLADMAV 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +     + +  A   D  +  + E++       I K +C +MA  +I EA++  GG G+
Sbjct: 292 KLYTMEQIVYDCARRVDAGQQATLESS-------IVKLYCTEMASQIIDEAIQIHGGMGF 344

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + R YR++    I  G+
Sbjct: 345 SRELPLERMYRDARVTRIFEGT 366


>gi|170748892|ref|YP_001755152.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655414|gb|ACB24469.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 414

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 56/299 (18%)

Query: 184 DPTNKAPMQKTSVA---IG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           DP  +A + + S     IG + L+E   G+D+A + ++  +  D        +W   +  
Sbjct: 118 DPDRRAELLRRSARGQWIGSISLSEPDAGSDLAGVQTRAVRDGDRWRLTGTKRWAGFAKG 177

Query: 240 SDAFIMLAQV------EGRVGCFLVPRLL---EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +D   +LA+       E R    L P L+    D  P G+   R+ +KIG     T EL 
Sbjct: 178 ADFIEVLARTRDPEPGEPR-SAGLEPFLVLKERDSFPPGVT-GRVIDKIGYHGFQTFELR 235

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340
                   L D+ V   P  D    +Y D    + SG   ++   ++ AR          
Sbjct: 236 --------LEDVCV---PESDRLTGLYGDQGADADSGGFAAVQRGLNIARVHTAARAVGV 284

Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                         R   G  + D   ++ A+AD+A D+A A A   ++A+  D+ +   
Sbjct: 285 ARAAVEDCQSYLQERVQFGHPIGDFQALRFALADMAADVAQARAFWHQVAHLLDQGEPAE 344

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+A  +++A        +MA  V  +AM+  GG+GY  ER + R++R++   +I  G+
Sbjct: 345 SESAMVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGT 396


>gi|93006342|ref|YP_580779.1| butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
 gi|92394020|gb|ABE75295.1| Butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 386

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  K  +  Y L+G K F+S   S   +++    G  G   +   
Sbjct: 124 LTEPNAGSDAASLRTKADKQGE-YYVLNGEKTFISGAGSTDVLVVMARTGAAGPKGISAF 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKI 314
           + D    G+ Y + ++K+G ++  T  + F        N  G       ++   ++  +I
Sbjct: 183 VVDADSAGIEYGKNEHKMGWKAQPTRTISFKDVKVPVENLIGEEGQGFRIAMKGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I     I +V   + +L  A +Y + R   G  +     ++  +AD+      A  + +
Sbjct: 243 NI----GICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLY 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+  D   + ++ + Y  +   ++   C  +A     EA++  GG GY+ E  + RH 
Sbjct: 299 LAASKVD--NNDAQASTYCAMAKRLSTDLCFDVAN----EALQLHGGYGYLNEYPLERHV 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDLRVHQILEGTNEIM 368


>gi|167741559|ref|ZP_02414333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 543

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 16/270 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G++  AI S  Q++  G + +SG K W  SS  +    + A+     G  LV  
Sbjct: 9   LTEPDAGSNARAIASVAQRVDGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGLVGL 66

Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
            L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 67  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARMSDACRLGAPGQGMAVAQQTMNFAR 125

Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 126 LGIGAVCVGAMK-RCAQLMHRYAARRRIGIGLLLDHPLSRQRLGDLRHRIDALSALIEQL 184

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 185 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 238

Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465
           +    I  G    ++  + + LL  G +L 
Sbjct: 239 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 268


>gi|148263656|ref|YP_001230362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146397156|gb|ABQ25789.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 592

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +     +DG  Y L+G K F+++   ++ + + A+++      FLV
Sbjct: 147 LTEPDSGSDALGAKTTATLSADGKYYLLNGTKQFITNGSFANLYTIFAKIDKEHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R  E     GL     + K+G + ++T ++   N       +LG++        ++  +
Sbjct: 207 ERTTE-----GLSVGAEEQKLGIKGSSTTQIILENAKVPVENVLGEIGKGHKIAFNVLNV 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                        + +LAE I YA  R   G  +     +K  IA+++  + AA +L +R
Sbjct: 262 GRFKLGAGVTGAAKYALAEGIRYANMRKQFGVPIGTFGAIKEKIANLSAAVFAAESLVYR 321

Query: 376 LA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           LA               N +D  +   EE A   I   I K +C ++   V+ E ++  G
Sbjct: 322 LAGLIDHKLATIPKDTSNYYDVYQKGIEEYA---IECAIAKVFCSEVLSDVVDEVVQIHG 378

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G+I+E      YR+   N I  G+
Sbjct: 379 GYGFIQEYPAEGFYRDERINRIFEGT 404


>gi|302653360|ref|XP_003018507.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517]
 gi|291182158|gb|EFE37862.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517]
          Length = 540

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GGPGM 322

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435

Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416
            A    SF  L N   + ++  E+AA  R+   I         T  +C + A  +     
Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522


>gi|302523290|ref|ZP_07275632.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302432185|gb|EFL04001.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 390

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA++++  +  D  + L+G K F+S   +    ++    G  G   +   
Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L D    GL +   ++K+G  +  T       V +      G       ++   +   ++
Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  
Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++ D    ++ +      +  + K +       +   A++  GG GY+ E  I +  
Sbjct: 308 QAADALDRKNPQAPQ------LIAMAKRFATDSGFQIADRALQLHGGYGYLHEYGIEKIV 361

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL GS   M
Sbjct: 362 RDLRVHQILEGSNEIM 377


>gi|186472405|ref|YP_001859747.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194737|gb|ACC72701.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 393

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + QK  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAQKKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F N       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ +++ +A + Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMLAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S    A   R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGSG--HARQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|92114762|ref|YP_574690.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797852|gb|ABE59991.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 593

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 39/293 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-----AFIMLAQV---- 249
           + LTE + G+D++ + ++   + DG  Y L G K F++    D       ++LA++    
Sbjct: 161 MNLTEPQAGSDLSVVRTR--AVPDGAHYRLHGQKIFITWGEHDCAENIVHLVLARLPDAA 218

Query: 250 EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299
           EG  G   FLVP+ L D     G  N +    L++K+G   + T  L F       G+L+
Sbjct: 219 EGNQGISLFLVPKRLVDAQGRLGERNDVNCVSLEHKLGIHGSPTCMLGFGERDGAIGYLV 278

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------L 349
           G+       +  M         I  +     +  +A+ YAR R V G +          L
Sbjct: 279 GEPGRGLAHMFTMMNAARHKVGIQGIGVAERAYQQALAYARER-VQGRVPKSRGGGSATL 337

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--MAPITKYW 403
           I+   ++R +  +   + A  AL+   A+  D A+    + + E A  R+    PI K +
Sbjct: 338 IEHYDVRRMLLSMRARLEALRALALLSASEMDIARHAESTEARERAQQRVDLYTPIVKAF 397

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               A  + + A++  GG GYIEE  +A+H R++    I  G+     LD++ 
Sbjct: 398 STDQAVDIASLAVQVHGGMGYIEETGVAQHLRDARIAPIYEGTNGIQALDLVT 450


>gi|89902271|ref|YP_524742.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347008|gb|ABD71211.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 388

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 44/288 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +      L +TE  GGTD++A+ +  +   D  Y + G K F++S M +D F +  +
Sbjct: 116 PVLRGEKIAALAITEPGGGTDVSALRTTARLEGD-EYVVDGDKIFITSGMRADWFTVAVR 174

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            +      G +   +VP     G   GL    LK K+G   + T +L F        +L+
Sbjct: 175 TDLKDKGPGGISMLMVP-----GDAPGLSRSPLK-KMGWLCSDTAQLRFDGVRVPAHYLV 228

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           G+            IL   +   +S++ M +  +E     A+ +AR+R   G  L+D  V
Sbjct: 229 GEEGAGF-----KMILTNFNGERLSMAAMALGFSECCYDEALAWARQRKTFGMALVDHQV 283

Query: 355 MKRAIADIALDI----AAATALSFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKM 407
           ++  + D+ + I    A   A+S R A+S D+A   +E  A   ++   A  T  +C   
Sbjct: 284 IRHKLMDMKMRIESTRAWLNAVSAR-ADSGDKAAKGAEWVAQVCLLKNHATQTMQFCAD- 341

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 + ++ +GG G++   +  R YRE     +++G G   ++  L
Sbjct: 342 ------QGVQILGGMGFMRGVACERIYRE--VKVMMIGGGTEEIMKEL 381


>gi|28900473|ref|NP_800128.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260877426|ref|ZP_05889781.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|260898907|ref|ZP_05907348.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|28808853|dbj|BAC61961.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089196|gb|EFO38891.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308090699|gb|EFO40394.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
          Length = 389

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F+N       +LG LN     VE +   
Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  +AD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQIALDAIQLLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|260061799|ref|YP_003194879.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|88785932|gb|EAR17101.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 380

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 31/287 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + +  E       P   T   IG   L+E   G+D  +  +  +   D  Y L+G K
Sbjct: 96  WGLEAYGTEEQKQKYLPALATGEKIGAFCLSEPEAGSDATSQKTTAKDAGDH-YVLNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D ++++AQ     G   +  L+ +    G      + K+G R + T  L F
Sbjct: 155 NWITNGNSADIYLVIAQTYPEKGHKGINALIVEKGMEGFEIGPKEQKLGIRGSDTHSLNF 214

Query: 292 SNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++             FGF      +S G     +I I   +  ++     +SL     Y+
Sbjct: 215 NDVKVPKENRIGADGFGFKFAMKTLSGG-----RIGIAAQALGIAAGAYELSL----KYS 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + +   +   +AD+   I AA  L +R A      K R E    +  MA  
Sbjct: 266 KERKAFGTEIANHQAIAFKLADMHTQIEAARMLVYRAATD----KDRGENYDLSGAMA-- 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  ++A     EA++  GG+GY++E  + R  R++    I  G+
Sbjct: 320 -KLYASQVAMDTAVEAVQIHGGNGYVKEYHVERLMRDAKITQIYEGT 365


>gi|326922425|ref|XP_003207449.1| PREDICTED: LOW QUALITY PROTEIN: long-chain specific acyl-CoA
           dehydrogenase, mitochondrial-like [Meleagris gallopavo]
          Length = 455

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 39/280 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  M D  I++
Sbjct: 184 PQMAAGKCIGAIAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKTFITNGWMCDVVIVV 241

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294
                E R     +   L +    G    R   KIG ++  T EL F +           
Sbjct: 242 TVTNREARSPAHGISLFLVENGTKGFTKGRKLEKIGLKAQDTAELFFEDVRLPASALLGK 301

Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               F +L+ +L     P E + I      A M+++G      E  +Y R+R   G  + 
Sbjct: 302 ENKGFYYLMAEL-----PQERLLI------ADMALAGCEFMFEETRNYVRQRKAFGKTVA 350

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +A++  +I    A         D       E       A + KYW   +  +
Sbjct: 351 HLQTVQHKLAEMKTNICVGRAF-------LDNCLELHSEKRLDSPTASMAKYWASDLQNS 403

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V  + ++  GGSGY+ E  IA+ + ++    I  G+   M
Sbjct: 404 VATQCVQMHGGSGYMWEYPIAKAFVDARVQPIYGGTNEIM 443


>gi|160897650|ref|YP_001563232.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363234|gb|ABX34847.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 398

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  +++S+  K+ DG Y L G+K W  +
Sbjct: 114 FGTEDQKNKYLPKLASGEFIGCFGLTEPDHGSDPGSMSSRAYKV-DGGYRLKGNKMWITN 172

Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           SP++D F++ A+    +G VG   +   + D    GL    +  K+G R++ T E+   +
Sbjct: 173 SPVADVFVVWAKEVTEDGHVG--EIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDD 230

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            F        ++    GP         L+SA   ++   +  AE     A  Y   R   
Sbjct: 231 VFVPEENAFPEVRGLKGP------FTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQF 284

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C
Sbjct: 285 GRPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLIKRNNC 337

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             +  +   A + +GG+G  +E  +ARH
Sbjct: 338 GKSLDIARMARDMMGGNGISDEFGVARH 365


>gi|254384727|ref|ZP_05000065.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343610|gb|EDX24576.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 385

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 45/274 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251
           L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGSKTFITGGVHADRVIVCARTSAPREDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L      D    G    R  +K+G R++ T EL F         D+ V   PVED
Sbjct: 184 RFGISL---FAVDTKSEGYSIGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229

Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356
           +     K   YL + + S       G       AI +A++ +V+   +  +PV      K
Sbjct: 230 LMGEENKGFYYLGANLPSERWGIAFGAYAQAKAAIRFAQQ-YVTERTVFGKPVAHFQNTK 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A    ++ AA A++ R   + D  +  + EAA A++       +C ++A  VI + +
Sbjct: 289 FELAACQAEVDAAEAVADRALEALDAGELTAAEAASAKL-------FCTEVAHRVIDKCL 341

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375


>gi|150376805|ref|YP_001313401.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150031352|gb|ABR63468.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 395

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D A + ++  +   G   +    W  ++P++D F++ A+ E      +  
Sbjct: 137 FGLTEPDAGSDPAGMKTRAIRTEGGYRLIGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316
            +LE G+  GL   ++  K+  R++ T E+   N   G   LL D+    GP        
Sbjct: 196 FVLEKGT-KGLSAPKIAGKLSLRASITGEIVLDNVEVGEEALLPDVEGLKGP------FG 248

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA    
Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE +   E       M  I K   C  A  +  +A +  GG+G  EE  + 
Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEEYQVM 361

Query: 432 RH 433
           RH
Sbjct: 362 RH 363


>gi|34499594|ref|NP_903809.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105445|gb|AAQ61800.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 128

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 33/47 (70%)

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           CF VPR   DGS N +  QRLK+K+GN SNA+ E+E  + +G L+GD
Sbjct: 26  CFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEVESHDAWGVLIGD 72


>gi|83771139|dbj|BAE61271.1| unnamed protein product [Aspergillus oryzae]
          Length = 559

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 17/302 (5%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK+              K  +   LG+TE   G+D+A I++  ++ 
Sbjct: 255 IARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEPDAGSDVANISTTARRE 301

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D +Y ++G K ++++ +   +   A   G  G   +  L+   +  G+  +R+ N   +
Sbjct: 302 GD-VYVVNGAKKWITNGIWADYCTAAVRTGGPGKGGISLLVIPLAAPGVTRRRMYNSGVH 360

Query: 282 RSNAT-VELE-FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            S +T +EL+        L+G+ N     +        L  A  S+   RV   +A HYA
Sbjct: 361 ASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLACASLRLARVCAEDAFHYA 420

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  LI +  ++  I    L I  A A   +L N  +  K R  +      M  +
Sbjct: 421 TQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIELTKDRPTDDVRIGGMTAL 480

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLL 458
            K    +     + EA + +GG+GY +    AR  + S  A   ++G G+  ++  L L 
Sbjct: 481 LKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLALQ 540

Query: 459 EK 460
           E+
Sbjct: 541 EE 542


>gi|254245716|ref|ZP_04939037.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124870492|gb|EAY62208.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 609

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 70/361 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
           L+E + G+ ++ I ++     D      Y L+G+K ++S    +       ++LA++   
Sbjct: 163 LSEPQAGSSLSDIATRADFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222

Query: 250 EGR-------VGCFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L   DG  NG    +    L +K+G R      L F     
Sbjct: 223 HGRLLPGTRGISLFIVPKFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   G+L+G  N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 283 YRPEGRAGAIGYLVGRPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     +             ++D P ++R +      +    AL+   A   DEA++  
Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHD 397

Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + A  A       I+ PI K W  +   A    A++  GG GY  + ++ R YR++  N 
Sbjct: 398 DAAVRAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD+L    K T         L+  +G++ ++   +       C++   LA
Sbjct: 458 IHEGTHGIQALDLLG--RKVTQDDGASLRALDARIGATVERARAL---DAGACEQADALA 512

Query: 502 R 502
           R
Sbjct: 513 R 513


>gi|257076973|ref|ZP_05571334.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 359

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 39/267 (14%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           K    +GLG+TE  GG+D+A + +  +K  +  Y L+G K F+++  ++D  ++LA+   
Sbjct: 101 KGKYILGLGVTEPSGGSDVAGLKTTAKKQGNK-YILNGSKMFITNGSIADYLVVLARTSE 159

Query: 252 R------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +  FLV   L+     G    +L +K+G R+  T EL+F+N       +L+  
Sbjct: 160 DSNPHHGLSTFLVNTKLK-----GFKANKLVDKLGVRATNTAELQFNNI------ELSED 208

Query: 306 TGPVEDMK----ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               E+ K    I+++ + + + V+   + +A       + ++    + D+  M R ++D
Sbjct: 209 DLIGEEGKGFYYIMMFFNISRIYVAAQSLGIARGAFDKIKSYIKENNIKDEESMFR-LSD 267

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI--------- 412
           +   I A   +++  A    E K + E  + A+     T  +  + A  ++         
Sbjct: 268 VGTRIEATRQMTYNAATYLFEFKPKPELTSMAKAYGSETAVYAAESAMEILGDHSAYEDV 327

Query: 413 ------AEAMECIGGSGYIEERSIARH 433
                 A+ ME   G+  IE+  IAR+
Sbjct: 328 QRIFRNAKIMEIWEGTSEIEKLVIARY 354


>gi|53717700|ref|YP_106686.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126439356|ref|YP_001057126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|134281361|ref|ZP_01768069.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167717438|ref|ZP_02400674.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167822097|ref|ZP_02453568.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167892182|ref|ZP_02479584.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167900692|ref|ZP_02487897.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167916952|ref|ZP_02504043.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
 gi|226193156|ref|ZP_03788766.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237814461|ref|YP_002898912.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia
           pseudomallei MSHR346]
 gi|254184131|ref|ZP_04890722.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254186597|ref|ZP_04893114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194723|ref|ZP_04901154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|254261872|ref|ZP_04952926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254298603|ref|ZP_04966054.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52208114|emb|CAH34044.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126218849|gb|ABN82355.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|134247028|gb|EBA47114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157808578|gb|EDO85748.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157934282|gb|EDO89952.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169651473|gb|EDS84166.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184214663|gb|EDU11706.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|225934756|gb|EEH30733.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237505530|gb|ACQ97848.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia
           pseudomallei MSHR346]
 gi|254220561|gb|EET09945.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 378

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW   +   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|307265587|ref|ZP_07547141.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919385|gb|EFN49605.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 380

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K        LTE   GTD AA   Q   + +G  Y L+G K F+++   +D +I+ A
Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAAA--QQTTAVLEGDHYILNGSKIFITNGGKADVYIVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G    +++ K+G R +   EL F +    ++   N+   
Sbjct: 171 MTDKSKGTKGISAFIVEKDFPGFYIGKVEEKMGIRGSRAAELVFEDC---VVPKENLLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI ++ LD   + +    + +A+A       Y + R   G  +     ++  IA+
Sbjct: 228 EGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A   +AA  L +  A       S + EAA A++ A  T       A  V  +A++  GG
Sbjct: 288 MATKASAARHLVYYAAWRKQNNLSYTMEAAMAKLFASET-------AMEVTTKAVQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLE 459
            GY ++  + R  R++    I  G+     + + LNLL+
Sbjct: 341 YGYTKDYPVERLMRDAKITEIYEGTSEVQKMVIALNLLK 379


>gi|254720530|ref|ZP_05182341.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265985561|ref|ZP_06098296.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306838102|ref|ZP_07470959.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264664153|gb|EEZ34414.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306406839|gb|EFM63061.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 375

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 30/273 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  + R YR+     I  G+ +   L +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRLVIARRL 375


>gi|195375919|ref|XP_002046745.1| GJ12313 [Drosophila virilis]
 gi|194153903|gb|EDW69087.1| GJ12313 [Drosophila virilis]
          Length = 424

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 51/298 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 143 TPEQKQKYLPKLCSGEHIG-------------GLAMSEPGAGSDVVSMKLRAERKGD-YY 188

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKI 279
            L+G K+++++  +DA  ++  V  + G   VP        ++E G       Q+L +K+
Sbjct: 189 VLNGTKFWITNG-ADAETLI--VYAKTGASGVPDRHAITAFIVETGWEGFSVAQKL-DKL 244

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSGM 328
           G R ++T EL F         DL V    V   E+  + + +          A   V  M
Sbjct: 245 GMRGSSTCELVFQ--------DLKVPAKNVLGQENKGVYVLMSGLEFERLVLAAGPVGLM 296

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +   A  YA +R   G ++ +  +++  +AD+   ++A  +  + +A S D A  RS 
Sbjct: 297 QAACDVAFDYAHQRKQMGKLIGEFQLIQGKMADMYTTLSACRSYLYAVARSCD-AGVRSS 355

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +     I+      +C + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 356 KDCAGVIL------YCAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 407


>gi|118466132|ref|YP_881782.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254819998|ref|ZP_05224999.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
 gi|118167419|gb|ABK68316.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 384

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 41/309 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T    + + P++ S E   T             + LTE  GG+D+
Sbjct: 87  MGGHTVVAKLISLYGTEEQKQKYLPRMASGEMRAT-------------MALTEPGGGSDL 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266
            A+T+  +   + +       W  ++  S    +L + + +      G  +V  L+E G 
Sbjct: 134 QAMTTTARAEGNELVINGAKTWISNARRSGLIALLCKTDPQAQPRHKGISIV--LVEHG- 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLD 319
             GL   R   K+G +   + EL F         +LGD     G  + MK L    I + 
Sbjct: 191 -QGLTVSRDLPKLGYKGVESCELSFDECRVPAAAILGD-EPGRGFAQMMKGLETGRIQVA 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           S  + V+    +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A  
Sbjct: 249 SRALGVAS--AALEDALKYAQERESFGQPIWKHQSVGNYLADMATKLTAARQLTRYAAEK 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D  +    EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P 
Sbjct: 307 YDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL 359

Query: 440 NSILLGSGN 448
             +++G G 
Sbjct: 360 --MIVGEGT 366


>gi|89099730|ref|ZP_01172603.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89085477|gb|EAR64605.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 588

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 35/268 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  +  +  +    G  Y L+G K +++ +  SD FI+ A+V+G+       
Sbjct: 147 LTEPNAGSDALSSQTVARLNEAGTHYILNGTKLYITNAAFSDTFIVYAKVDGKD---FTA 203

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
            +LE   P GL     +NK+G + ++T        E+   N  G          G V  +
Sbjct: 204 FILEKDFP-GLVLGPEENKMGIKGSSTRSVILEDCEVPAENMLG------EQGKGHVIAL 256

Query: 313 KIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +L      L SA M  +  + SL +A  Y + R   G  + D    K  +  +A  I A
Sbjct: 257 NVLNLGRFNLGSACMGAA--KYSLKKAAQYTQERRQFGRKIADFHATKEKVGKMAARIYA 314

Query: 369 ATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPA-----VIAEAMEC 418
           + ++ +R A   +EA      S     A  R+    ++   CK+  +        E ++ 
Sbjct: 315 SESMQYRTAGLLEEALGDVWDSPDSRLAGKRMSEYASECAVCKVFGSETLDYAADETLQL 374

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG+G+I+E  I + YR+S  N I  G+
Sbjct: 375 YGGAGFIKEYGIEQIYRDSRINRIFEGT 402


>gi|110635619|ref|YP_675827.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110286603|gb|ABG64662.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 388

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 14/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + +TE + G+D+A I S+ + +S G Y L+G K W  ++ ++D  ++ A++        V
Sbjct: 121 IAVTEPQNGSDVAGIKSRARAVSGG-YLLNGAKIWCTNAAVADFIVVGAKLGDDDSRHAV 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              +     +GL     ++K+G R   +  L F + F      L  + G     K ++  
Sbjct: 180 NLFIVQKGTSGLTIGPKEDKLGARGLPSCPLFFEDVFVPEENRLGGNDGG--GFKAVMAG 237

Query: 319 DSAIMSVSGMR-VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            +    + G R V LA+     AI +   R+  G  + D   ++  +AD+A+   AA  L
Sbjct: 238 FNEFRPIIGARAVGLAQGAIDHAIQFVTNRYTFGARVSDNQGIRWMLADMAMQTEAARIL 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   D  + R E+ A    MA   K +   +A  V  +A++  G +G   +  I R
Sbjct: 298 VYSAAAMVDSGE-RGEKLAQQAAMA---KAFATDVAMKVTTDAVQLFGAAGISNDSPINR 353

Query: 433 HYRESPANSILLGS 446
           + R++    I+ G+
Sbjct: 354 YMRDAKVTQIVEGT 367


>gi|254187301|ref|ZP_04893815.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|157934983|gb|EDO90653.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
          Length = 1293

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 759  LTEPNAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 989  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021


>gi|298243655|ref|ZP_06967462.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297556709|gb|EFH90573.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 596

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 21/266 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLV 258
           LTE   G+D   + ++ +   DG  Y L+G K W  ++  +D F++ A++   R   F+V
Sbjct: 151 LTEPGVGSDAMGLGTRAELSEDGKYYILNGTKQWISNAGFADVFVVFARIGNERPSAFIV 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
               E   P G+     +NK+G + ++T +L   +       LLG+++       ++  +
Sbjct: 211 ----EANWP-GVTTGPEENKMGIKGSSTRQLILQDVKVPTENLLGEIHKGYKIAFNILNI 265

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L     +V G R +L  A  Y   R   G  L +  ++K+ +A +A +  AA +  FR
Sbjct: 266 GRLKLGAGTVGGARNALKLAATYTNERKAFGKFLHEFGMIKKKLARMAAETYAAESEVFR 325

Query: 376 LANSFDEAKSRSEEAAYA--------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A +   A+    +   A         I A + K    ++   V+ E ++  GG G+++E
Sbjct: 326 TAANISNAQHSGGDNTDAIFKAVEDYAIEASLAKVHGSEVLAMVVDEGVQIFGGYGFMKE 385

Query: 428 RSIARHYRESPANSILLGSG--NAMV 451
             I + YR++    I  G+   N MV
Sbjct: 386 YPIEKAYRDARIQRIFEGTNEINRMV 411


>gi|255525452|ref|ZP_05392389.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|255510817|gb|EET87120.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
          Length = 379

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD++    Q   + DG  Y L+G K F ++ P++D  ++ A  +   G   
Sbjct: 123 FGLTEANAGTDVSG--GQATAVLDGDYYILNGEKKFTTNGPIADTLMVFALTDKTKGSKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + +    G    +L++K+G R+    E  + N     +   N+     E  KI + 
Sbjct: 181 MSAFIVEKDFPGFSIGKLEDKMGIRAAQVSETLYKNC---RVPKENLVGKEGEGFKIAMK 237

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + V+   + +AE      I Y + R   G  +     +   +AD+ + I  A  
Sbjct: 238 ALDCGRIGVAAQGLGIAEGALEETIKYVKVRKQFGKEIYKFQGLAWMMADMDMKIEQARN 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A   D     S  AA A++ A          A  V  EA++ +GG GY+++  + 
Sbjct: 298 LVYKAAWEKDNGIPYSVSAARAKLAA-------TDAAMYVTTEAVQILGGYGYMKDYPLE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKITQIYEGT 365


>gi|156031211|ref|XP_001584930.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154699429|gb|EDN99167.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 443

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 19/279 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y +SG+K W  +S  +  FI+ A 
Sbjct: 172 PKLATNTVGSFCLSEPVSGSDAFALATKATKTDSG-YTISGNKMWITNSMEAGFFIVFAN 230

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           ++   G   +   + +    G    + + K+G ++++T  L F +     +   N+    
Sbjct: 231 IDPSKGYKGISAFIVEKGMKGFSIAKKEKKLGIKASSTCVLNFDDV---EIPKENLLGEE 287

Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIAD 361
            +  K  I  L+   + ++     LA      A  Y    R   G ++ D   M+  IA 
Sbjct: 288 GQGYKYAIALLNEGRIGIAAQMTGLALGAFENATKYVWNDRKQFGQLVGDFQGMQHQIAQ 347

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +IAAA AL +  A   +  +   ++AA A++ A        ++A  V   A++ +GG
Sbjct: 348 SYTEIAAARALVYNAARKKEAGEDFVQDAAMAKLFA-------SQVAQRVSGLAVQWMGG 400

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G++ E    + +R+S   SI  G+ N  +  +  LL++
Sbjct: 401 MGFVREGIAEKMWRDSMIGSIYEGTSNIQLTTIAKLLKQ 439


>gi|84685154|ref|ZP_01013053.1| glutaryl Co-A dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666886|gb|EAQ13357.1| glutaryl Co-A dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 397

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K +DG Y L+G K W  +SP++D F++ A+ E   G+V  
Sbjct: 139 FGLTEPDAGSDPAGMKTRAKK-TDGGYVLNGSKMWISNSPIADVFVVWAKSEAHDGKVRG 197

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   +++ K+  R++ T E+   +       LL +++  +GP    
Sbjct: 198 FVLEKGMK-----GLSAPKIEGKLSLRASITGEIVMEDVEVGEDALLPNVSGMSGP---- 248

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQP-----VMKRAIADIALD 365
                L+ A   +S   +  AE   +  R H  G      D+P     + ++ +AD+  +
Sbjct: 249 --FGCLNRARYGISWGAMGAAEDCWF--RAHAYGMERKQFDRPLAATQLYQKKLADMQTE 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA     + R+    D  K       +A  M  I K   C  A  +  +A +  GG+G  
Sbjct: 305 IALGLQGALRVGRLMDAGK-------FAPEMISIVKRNNCGKALDIARQARDMHGGNGIS 357

Query: 426 EERSIARH 433
            E  + RH
Sbjct: 358 SEYHVMRH 365


>gi|121598571|ref|YP_994760.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           SAVP1]
 gi|124383435|ref|YP_001027802.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia
           mallei NCTC 10229]
 gi|126448074|ref|YP_001082251.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           NCTC 10247]
 gi|254357322|ref|ZP_04973596.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei
           2002721280]
 gi|121227381|gb|ABM49899.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           SAVP1]
 gi|124291455|gb|ABN00724.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia
           mallei NCTC 10229]
 gi|126240944|gb|ABO04037.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           NCTC 10247]
 gi|148026386|gb|EDK84471.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei
           2002721280]
          Length = 378

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW   +   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|326797463|ref|YP_004315282.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326548227|gb|ADZ76612.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 597

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 46/289 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +   +G  Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 151 LTEPNAGSDANSGRTTAKLNDEGTHYLINGQKMWITNGGFADIFIVFAKIDDDKNLSAFI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 211 VERAF-----GGITMNPEEHKLGIKGSSTRQVFFNDCPVPKENLLSERENGFKIAVNILN 265

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +           I L +A +  S  R  +++AI+YA  R      +     ++  +A++A
Sbjct: 266 IGR---------IKLGAAAIGSS--RKVISQAINYANERVQFKLPIAKFGAIRYKLAEMA 314

Query: 364 LDIAAATALSFRLANSFDEAK----SRSEEAAYAR--------IMAPITKYWCCKMAPAV 411
               A  + ++R   + D+A     S   E A A+        I   I K W  +M   +
Sbjct: 315 TRNFAVESAAYRAGQNIDDAYEALVSDGMEPAKAKLKSTEQFAIECAILKVWGSEMLDYI 374

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E ++  GG GY  +  + R YR+S  N I  G+     L ++++L K
Sbjct: 375 VDEGVQIYGGMGYSADAPMERSYRDSRINRIFEGTNEVNRLLIVDMLLK 423


>gi|294633167|ref|ZP_06711726.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830948|gb|EFF89298.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 41/316 (12%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S+ AL  TP V   +  +    EY P     M     A    ++EK  G+D++A+     
Sbjct: 77  SIQALSATPIVR--YGNREQQLEYLPR----MASGETAGSFAISEKEAGSDMSAVGLTAD 130

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVP------RLLEDG-- 265
           ++S G Y L+G K W   + ++D   ++A+  G  G      FLVP      R+LE+   
Sbjct: 131 RVSGG-YLLTGRKAWIAHAGIADVHCVIARTGGGPGALGLTAFLVPARTPGVRVLEEVRL 189

Query: 266 -SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +P  L +   ++ +         +  S+  G       V+T  +E  ++ +       +
Sbjct: 190 IAPRSLGHLAFEDCL---------VPESSVLGRPGQGFVVATDLLERFRMTV----GAAA 236

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R ++  A+  AR R + GG L+D  ++K A+AD+ + + A+  L  R A   D   
Sbjct: 237 VGFARRAVDSAVQQARERRMHGGRLMDLQLVKGALADMEVKLNASALLVARAAWELDHGN 296

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                  YA+  + I K    + A  ++  A++  G +G + +    R YR+  +  I  
Sbjct: 297 P-----GYAK-HSSIAKVAATEAAQEIVDAAVQIHGAAGLVADSVPERLYRQVRSLRIYE 350

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L + + L +
Sbjct: 351 GASEVQKLIIADTLGR 366


>gi|260806450|ref|XP_002598097.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae]
 gi|229283368|gb|EEN54109.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae]
          Length = 385

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------ 252
           L +TE   G+D+  I +  +K  D  + L+G K F+++  M+D  I++A    +      
Sbjct: 127 LAMTEPGAGSDLQGIRTNAKKNGDD-WILNGSKVFITNGWMADVTIVVAITNPQAKSAAH 185

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----- 303
            +  FLV   +E     G    R   KIG ++  T EL F +       LLG  N     
Sbjct: 186 GISLFLVEEGME-----GFKKGRKLEKIGMKAQDTAELFFDDVRLPPSALLGQENRGFVY 240

Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +   P E    LI  D AI S   M     E  +Y + R   G  +     ++  +A+I
Sbjct: 241 LMQELPQER---LIIADMAIASSEFM---FEETRNYVKERKAFGKTVSRLQTIQHKLAEI 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             DI    A   +     ++ +  S  A+ A       K+W   +   V  + ++  GG 
Sbjct: 295 KTDIVVGRAFLDQCLELHNQGRLDSNTASMA-------KFWASDLQNRVATQCLQMHGGW 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IA+ + +S    I  GS   M
Sbjct: 348 GYMWEYPIAKAFVDSRVQPIYGGSNEIM 375


>gi|326919882|ref|XP_003206206.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 465

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  I+ A+ +       V
Sbjct: 204 LAMSEPNAGSDVVSMKLKADKKGD-YYVLNGNKFWITNGPDADVLIVYAKTDLNA----V 258

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           P        ++E G P     Q+L +K+G R + T EL F +       +LG L+     
Sbjct: 259 PASQGITAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAENILGKLSKGV-- 315

Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                ++  LD   + +SG     M+  L  AI Y   R   G  +    +M+  +AD+ 
Sbjct: 316 ---YVLMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMY 372

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A     + +A + D+    +++ A   + +        + A  V  + ++C+GG+G
Sbjct: 373 TRLMACRQYVYNVAKACDQGHFNAKDCAGVILFSA-------ECATQVALDGIQCLGGNG 425

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           YI +  + R  R++    I  G+G + V
Sbjct: 426 YINDYPMGRFLRDAKLYEI--GAGTSEV 451


>gi|320352863|ref|YP_004194202.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032]
 gi|320121365|gb|ADW16911.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032]
          Length = 381

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K     G GLTE   G+D     +   +  DG  + L+G K F+++   ++ +++LA
Sbjct: 114 PLAKGEKIGGFGLTEPSAGSDAGGTKTTATR--DGNDWILNGSKIFITNAGEAETYVVLA 171

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           + +        +  F+V    E G+P G  + + + K+G RS+ T+EL F N    + GD
Sbjct: 172 RSDKNAEKHRGISAFIV----EKGTP-GFSFGKKEKKMGIRSSPTMELVFENC--RIPGD 224

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
            N+     +  K+ +  LD   + ++   + +A+     A+ Y + R      +     +
Sbjct: 225 -NLLGQEGQGFKVAMKTLDGGRIGIAAQALGIAQGALDAALAYTKEREQFNKPIASFQGV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  + AA  L +  A       S S E+A A++ A  T       A  V  +A
Sbjct: 284 SFQLADMATQVEAARLLIYNAAYRASNGLSYSLESAMAKLFASET-------AMRVTTQA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY  E  + R  R++    I  G+
Sbjct: 337 VQLHGGYGYTREFPVERMMRDAKITEIYEGT 367


>gi|296167104|ref|ZP_06849514.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897546|gb|EFG77142.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 460

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 56/329 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P    +WAP+ F    D      ++  ++AI    +E  GG+D+  + ++ +
Sbjct: 96  SAIGQAASPEQMLEWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTRAR 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL   
Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVP----GGTP-GLKLV 199

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309
           R  +K+G R++ T EL           LLG                       + + G  
Sbjct: 200 RKLDKLGCRASHTAELLLEGVRVPGANLLGGQEKLEHKLAKAREVVAGGKRSGSATLGTF 259

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  + ++    A  ++   R +L  A  YA  R   GG +ID   +   +A++A  I AA
Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATAYATEREAFGGPIIDNQGIAFPLAELATQIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R   S+  A +      + R    ++K    ++A      A++ +GG GYI +  
Sbjct: 316 RLLTWR--ASWMAANN----VPFERGEGSMSKMAASEVAVKATERAIQTMGGWGYITDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + + YR++   +I  G+     + + N L
Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVIANAL 398


>gi|145237726|ref|XP_001391510.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus niger CBS 513.88]
 gi|134075984|emb|CAK48178.1| unnamed protein product [Aspergillus niger]
          Length = 431

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 17/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG + L+G K W  + P +D  ++ A+ E       +
Sbjct: 165 LAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     +LG++N        +K+L
Sbjct: 224 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENVLGEVN------RGVKVL 277

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   +AA+
Sbjct: 278 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGMPIAHNQLIQGKLADMYTKLAAS 337

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A ++  A   D + +    A            +  + A     +A++ +GG+GYI E  
Sbjct: 338 RAYTYATARQIDNSAAEGSGALIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIP 397

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 398 AGRLLRDAKLYEIGAGT 414


>gi|254250103|ref|ZP_04943423.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124876604|gb|EAY66594.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 411

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 159 LTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 218 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 269

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A+ I AA
Sbjct: 270 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 329

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 330 RLLVHHAAKLRTAGLPCLSEASQAKLFAS-------EMAERVCSDAIQIHGGYGYLVDYE 382

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 383 VERHYRDARITQIYEGT 399


>gi|21219931|ref|NP_625710.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|6468707|emb|CAB61663.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 391

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D A++ ++  + S G + ++G K W     ++D + ++A+   +G  G   F
Sbjct: 133 LSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHGGIADFYTVMARTGEDGPRGITAF 192

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP   E     GL     + K+G + + T +L      G  + D        +   I L
Sbjct: 193 LVPADAE-----GLSAAVPEKKMGLKGSPTAQLHLD---GVRVPDARRLGDEGQGFAIAL 244

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 245 SALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQGLRFMLADMATQIEAGR 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     +++AA A       K  C   A  V  +A++ +GG GY  +   
Sbjct: 305 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTHDAVQILGGYGYTADFPA 357

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 358 ERYMREAKVLQIVEGT 373


>gi|291522107|emb|CBK80400.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 387

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--------- 249
            GLTE   GTD AA+     K     + L+G K F+++   +D F++ A V         
Sbjct: 123 FGLTEPGAGTD-AAMQKTVAKDEGDHWVLNGSKVFITNAQYADIFVVFAMVYRDDYKERP 181

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +  F++ +  E     G   Q  + K+G R ++T  L F N    ++   N+   
Sbjct: 182 YTNKDISAFIIEKGFE-----GFSVQGHEMKMGIRGSSTCSLYFDNC---IVPKENLLGE 233

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  K+ +  LD   + ++   + +A     E + Y + R   G  +      +  +AD
Sbjct: 234 QGKGFKVAMTTLDGGRIGIAAQAIGIAQGAINETVAYTKERVQFGKPIWKFQNTQFQLAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + AA  L +R A +  + +  S  AA A+++A  T       A  V    ++ +GG
Sbjct: 294 MQAKVDAARLLVYRAAQAKQDGEPHSHLAAMAKLVASET-------ASDVARRCVQLVGG 346

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GY  E    RH R++    I  G+
Sbjct: 347 NGYSREYPFERHMRDAKITEIYEGT 371


>gi|228921915|ref|ZP_04085227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837747|gb|EEM83076.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 397

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           L LTE   G+D+  I +   +  D +      KW      +D F++  ++ G   + C L
Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
           VP+        G+    +++ +G ++    E+EF+N             F F      ++
Sbjct: 183 VPK-----DSVGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  ++  +R  L    ++   R   G  LID  ++   + D+ +D
Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVD 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  LS     + +E ++ + E    +IM  I KY+  +        A++ +G  G  
Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +  SI+R +R+S    I+ GS
Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364


>gi|222111580|ref|YP_002553844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731024|gb|ACM33844.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 398

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172

Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A +VE       +   + D    GL    +  K+G R++ T E+   + F
Sbjct: 173 SPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 233 VPEENAFPEVRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C  
Sbjct: 287 PLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365


>gi|241554285|ref|YP_002979498.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863591|gb|ACS61253.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 381

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 39/291 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P   + + PK+ S E+  +             L ++E   G+D+ ++  + +K  D  Y
Sbjct: 104 SPEQKRRYLPKLISGEHVGS-------------LAMSEVGAGSDVVSMRLRAEKKGD-RY 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++P +D  ++ A+ +   G   +  L+ E G P G    +  +K+G R +
Sbjct: 150 VLNGTKFWITNAPHADVLVVYAKTDPAAGPKGISALIIEKGLP-GFGVSKKLSKLGMRGS 208

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEA 335
            T EL F +       L+G         E +KIL+  LD     ++G     M+  L   
Sbjct: 209 DTAELVFEDCAVPAEALMGREG------EGVKILMSGLDYERAVLAGGPLGIMQACLDVV 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y R R   G  + D  +M+  IAD+ + + +A A  + +A + D  ++   +AA A +
Sbjct: 263 LPYVRDRKQFGKAIGDFQLMQGKIADMYVALNSARAYVYSVARACDAGRATRTDAAAAIL 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A        + A  V  EA++ +GG+GY +E  + R  R++    I  G+
Sbjct: 323 FA-------SENAVKVSLEAIQALGGAGYTKEWPVERFLRDAKLYDIGAGT 366


>gi|83721003|ref|YP_440620.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167617415|ref|ZP_02386046.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|83654828|gb|ABC38891.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 378

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 124 IAMTEPGAGSDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW  ++   VI   ++  GG GY+ E 
Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370


>gi|26990266|ref|NP_745691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985215|gb|AAN69155.1|AE016549_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 589

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
           P+ +   A  + LTE   GTD+  I ++ +  +DG   +SG K F++    D       +
Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 213

Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA++         +  FLVP+ L +     G+ N +    +++K+G +++AT  + F  
Sbjct: 214 VLAKMPDAPAGAKGISLFLVPKFLVEADGRLGARNAVHCGSIEHKMGIKASATCVMNFDG 273

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352
             G+L+G+ N     +  M     L   I  +     S   A  YA  R  S      Q 
Sbjct: 274 AIGYLVGEPNKGLTAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 333

Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
                 P++            R + +     A        +A   ++A  R        +
Sbjct: 334 HDKAADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 393

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +             +  GG GYI E    +  R+     I  G+     LD+L
Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453

Query: 456 N 456
            
Sbjct: 454 G 454


>gi|15842262|ref|NP_337299.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|13882554|gb|AAK47113.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|323718717|gb|EGB27879.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CDC1551A]
          Length = 386

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE    +D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTASDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ +    G    R  +KIG  +  T EL F++               F +L+ +L  
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E + I      AIM+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|330503596|ref|YP_004380465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917882|gb|AEB58713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 375

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+    +     LTE + G+D + + ++ ++  +  Y L G K F++S      +++  V
Sbjct: 111 PLASGEMLGAFALTEPQAGSDASDLRTRARREGEH-YVLDGAKQFITSGSHAGMVIVFAV 169

Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                G+ G   F+VP         G    R+++K+G  ++ T +++F          LG
Sbjct: 170 TDPQAGKKGISAFIVPT-----DTPGFSVVRVEDKLGQHASDTCQIQFDAVRIPDSLRLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  +V   R +   A  YA  R   G  +I+   + 
Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERVTFGKPIIEHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  IA A  +    A+  +  +    EA+ A++ A        +MA  V + A+
Sbjct: 281 FRLADMATQIAVARQMVHHAASLREAGQPCLTEASMAKLFA-------SEMAEKVCSAAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + +GG GY+++  + R YR+     I  G+ +
Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSD 365


>gi|302507358|ref|XP_003015640.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371]
 gi|291179208|gb|EFE34995.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371]
          Length = 540

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 322

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435

Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416
            A    SF  L N   + ++  E+AA  R+   I         T  +C + A  +     
Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522


>gi|111222831|ref|YP_713625.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150363|emb|CAJ62060.1| Putative Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 389

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRV 253
           + LTE  GG+D+ A+ +  +   DG + + G K ++S+      I L      A      
Sbjct: 125 MALTEPGGGSDLQALRTVARPDGDG-WVVDGAKTWISNARRSGLIALLCKTDPAAKPAHR 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD-LNVS 305
           G  ++  L+E G   G    R   K+G +   + EL F        +  G + G   N  
Sbjct: 184 GISIL--LVEHGP--GFTVSRDLPKLGYKGIESCELHFDGYRAPGDSVLGGVTGKGFNQM 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I +    A  ++   R +  +A+ YA+ R   G  + +   +   +AD+   
Sbjct: 240 MAGLEVGRIQV----ASRALGVARAAFDDALRYAQERETFGKPIWEHQSIGNYLADMGTK 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L    A  FD       EA  A++ A        +MA  V  +A+   GG GY 
Sbjct: 296 ILAARQLILHAAEVFDSGARADMEAGMAKLFA-------SEMAATVTLDAIRIHGGYGYS 348

Query: 426 EERSIARHYRESPANSILLGSGN 448
            E  + R++R++P   +++G G 
Sbjct: 349 TEFDVERYFRDAPL--MIVGEGT 369


>gi|301346789|ref|ZP_07227530.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB056]
 gi|301597822|ref|ZP_07242830.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB059]
          Length = 372

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|297528853|ref|YP_003670128.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297252105|gb|ADI25551.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 594

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 47/313 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            R        G+     + K+G +S++T       V +   N  G       +  G V  
Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL        + +V G + +L   + YA +R      +    + +   A +A  + AA
Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318

Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  +R    FDE             K  ++  A   I   + K++  ++   ++ E ++
Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465
             GG G+++E  I R YR+S  N I  G+     L V            L L +K   L 
Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKALKGELPLFQKAQQLQ 438

Query: 466 EQLFSTLEQDLGS 478
           E+L     ++ GS
Sbjct: 439 EELMMMAAEEPGS 451


>gi|254823450|ref|ZP_05228451.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 382

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +  ++  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAERDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLVGAENSGFAQIAQAFVA 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  
Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRH 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +       ++    +  +A+  A     W       V  +A++  GG GY+ E  + R Y
Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMTESEVERQY 354

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     + +G G   +L  L+
Sbjct: 355 RD--MRILGIGGGTTEILTALS 374


>gi|225852588|ref|YP_002732821.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256263921|ref|ZP_05466453.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640953|gb|ACO00867.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263094065|gb|EEZ17987.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409107|gb|ADZ66172.1| glutaryl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326538813|gb|ADZ87028.1| glutaryl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L  ++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPSVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCDKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|209154530|gb|ACI33497.1| Isovaleryl-CoA dehydrogenase, mitochondrial precursor [Salmo salar]
          Length = 414

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  I+ A+ +       +
Sbjct: 155 LAMSEPNAGSDVVSMKLKAKKEGDH-YILNGVKFWITNGPDADVLIVYAKTDPEAHQKGI 213

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V    E G P     Q+L +K+G R + T EL F +       +LG LN     + 
Sbjct: 214 TAFIV----EKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPVENVLGPLNKGVYVMM 268

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               L  L  A   +  M+  +  ++ Y   R   G  +    +M+  +AD+   + A  
Sbjct: 269 SGLDLERLVLAAGPIGIMQSVMDFSVPYLHVREAFGQKIGHFQLMQAKMADMYTRLGACR 328

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              + +A + D+    S + A   +       +C + A  V  + ++C+GG+GYI +  +
Sbjct: 329 QYLYNVARACDKGHFSSMDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPM 381

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 382 GRFLRDAKLYEIGAGT 397


>gi|319951408|ref|ZP_08025227.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319434927|gb|EFV90228.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 612

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 63/298 (21%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252
           LTE   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSDDMFENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  F VP+   D      G  NG+    +++K+G +++ T E+ F        G+++
Sbjct: 224 TKGLSLFFVPKFHFDFENDELGERNGVFVTGVEHKMGIKASTTCEVTFGGHGVPAKGWMV 283

Query: 300 GDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-- 351
           G   ++ G       +E  ++++       ++S +      A+ +A+ R V GG + +  
Sbjct: 284 GGDELNQGIRQMFDVIEHARMMV----GTKAISTLSTGYLNALEFAKER-VQGGDMTEMA 338

Query: 352 -----------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------ 394
                       P ++RA+         A A   R    +  A    E A  A       
Sbjct: 339 DKTAPRVTITHHPDVRRALIR-----QKAFAEGLRAVYMYTAAHQDPETAVRASGADAEL 393

Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 ++ PI K    + A  ++ E+++  GGSG++++  I ++ R++  +S+  G+
Sbjct: 394 AHRVNDLLLPIVKGVGSERAYELLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 451


>gi|126735560|ref|ZP_01751305.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126714747|gb|EBA11613.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 407

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + +  +K  DG Y ++G K W  ++P++D F++ A+    +G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTTAKKTEDG-YIINGSKMWISNAPIADVFVIWAKSDAHDGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+   N   +   LL  +    GP    
Sbjct: 208 FVLDKGMQ-----GLSAPKVGGKLSLRASVTGEIVMDNVAVSEDALLPGVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   ++   +  AEA  +A R++       ++P     + ++ +AD+  +IA
Sbjct: 259 --FGCLNRARYGIAWGVMGAAEACWHAARQYGLDRKQFNKPLAQTQLFQKKLADMQTEIA 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             T  + +L    ++ K+  E       M  + K   C  A  +   + +  GG+G  E+
Sbjct: 317 LGTQSALQLGRLMEQGKAAPE-------MISLMKRNNCGKALDIARASRDMHGGNGISED 369

Query: 428 RSIARH 433
             I RH
Sbjct: 370 FQIMRH 375


>gi|170732670|ref|YP_001764617.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169815912|gb|ACA90495.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 609

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 70/361 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
           L+E + G+ ++ I ++     D      Y L+G+K ++S    +       ++LA++   
Sbjct: 163 LSEPQAGSSLSDIATRADFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222

Query: 250 EGR-------VGCFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L   DG  NG    +    L +K+G R      L F     
Sbjct: 223 HGRLLPGTRGISLFIVPKFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   G+L+G  N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 283 YRPEGRAGAIGYLVGRPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     +             ++D P ++R +      +    AL+   A   DEA++  
Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHD 397

Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + A  A       I+ PI K W  +   A    A++  GG GY  + ++ R YR++  N 
Sbjct: 398 DAAVRAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD+L    K T         L+  +G++ ++   +       C++   LA
Sbjct: 458 IHEGTHGIQALDLLG--RKVTQDDGASLRALDARIGATVERARAL---DAGACEQADALA 512

Query: 502 R 502
           R
Sbjct: 513 R 513


>gi|317487978|ref|ZP_07946561.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|316912927|gb|EFV34453.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 379

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 28/261 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR 252
           I   LTE   G+DI+AI++      DG Y ++G K F+++  + D F + A+V    + +
Sbjct: 119 ICFALTEPNAGSDISAISTTALPDGDG-YTINGGKIFITNGAVGDWFTVFARVVEDGQSK 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             CF+V R        GL   R ++K+G R + T +L F N     +G   V  G V D 
Sbjct: 178 PSCFIVHR-----DTPGLVIGRKEDKMGLRGSVTSQLYFENMH---VGPEAV-VGEVGDG 228

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALD 365
             + +  L+   ++V+ +   +  A   A     + R   G  + D   ++  +AD+ + 
Sbjct: 229 FAIAHHTLNRGRLAVAALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEIT 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  L  + A++F        +       A + K +C + A      A++  GG G  
Sbjct: 289 LEASRLLLDQAASAF------GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLC 342

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R+YR++ + +I+ G+
Sbjct: 343 KDYPVERYYRDAKSFTIVEGT 363


>gi|295835338|ref|ZP_06822271.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197696410|gb|EDY43343.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 387

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA++++  +  D  + L+G K F+S   +    ++    G  G   +   
Sbjct: 130 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 188

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L D    GL +   ++K+G  +  T       V +      G       ++   +   ++
Sbjct: 189 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRMLGAEGQGFRIAMNGLNGGRL 248

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  
Sbjct: 249 GI----AACSLGGARSALDRSLQHLAEREAFGHPLIESEALRFRLADMATELAAARALLH 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++ D   +++ +      +  + K +       +   A++  GG GY+ E  I +  
Sbjct: 305 QAADALDRKDAQAPQ------LIAMAKRFATDTGFRIADRALQLHGGYGYLHEYGIEKIV 358

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL GS   M
Sbjct: 359 RDLRVHQILEGSNEIM 374


>gi|83594394|ref|YP_428146.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83577308|gb|ABC23859.1| Isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 563

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 43/307 (14%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  G L + S  +A +++L  T    + W P++ S E  PT                T
Sbjct: 253 AYIGVGSLGTRSEIAAELISLGGTEEQKRQWLPRLASGEILPTAV-------------FT 299

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL- 262
           E   G+D+A++ S+ ++  D         W   +  SD   +L +   + G +    +L 
Sbjct: 300 EPNTGSDLASLRSRAERDGDTYRVTGAKTWITHAARSDLMTLLVRTNPQEGGYKGLSMLL 359

Query: 263 --------EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312
                   ED  P  G+    +K  +G R     EL F    GF +   N+  G  E   
Sbjct: 360 AEKPRGSDEDPFPAKGMAGGEIK-VLGYRGMKEYELSFD---GFEVPAANL-LGSEEGQG 414

Query: 313 --KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +++   +SA +  +   V +A+      + YA+ R   G  L   P +   +A +A++
Sbjct: 415 FKQLMATFESARIQTAARAVGVAQNAMEVGLRYAQDRVQFGKPLYAFPRVHGKLAWMAVE 474

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              A  L++R     D  +    EA  A+++A        ++A +    A++  GG+GY 
Sbjct: 475 TMVARQLTYRAGREKDSGRRCDIEAGMAKLLA-------ARVAWSNADNALQVHGGNGYA 527

Query: 426 EERSIAR 432
           EE  I+R
Sbjct: 528 EEYPISR 534


>gi|297566220|ref|YP_003685192.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296850669|gb|ADH63684.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 578

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 17/257 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE + G+D     ++ +   DG  Y ++G K W  ++  +  F + A+ +  +  FLV 
Sbjct: 148 LTEPQSGSDAMGAKTRAELSEDGKYYIINGTKMWISNAGFAHLFTVFAKTKEGLTAFLVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
           R        GL     + K+G +S++T ++ F +       +LG+L        ++  + 
Sbjct: 208 R-----DTPGLRLGGEEKKMGIKSSSTRQVFFEDVKVPVENVLGELGKGHKIAFNVLNVG 262

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                  ++ G + +LA +  YA+ R   G  + +  ++++ +A++A  I A  +  +R 
Sbjct: 263 RYKLGAGAIGGAKEALALSAKYAKERVAFGQPIANFGLIQQKLAEMASRIFAGESAVYRT 322

Query: 377 ANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               DEA       EA  A I      A I K    ++    + E ++  GG GY  E +
Sbjct: 323 MGLIDEAIAGKTGTEAVLAGIEEYAVEASIIKVLGSEILDYAVDEGVQIHGGYGYSGEYA 382

Query: 430 IARHYRESPANSILLGS 446
           I R YR+S  N I  G+
Sbjct: 383 IERAYRDSRINRIFEGT 399


>gi|183983130|ref|YP_001851421.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183176456|gb|ACC41566.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 381

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 42/294 (14%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YC 227
           + + W PK+ S E               IG + +TE   G+D+ ++ ++   I DG  Y 
Sbjct: 109 LRRQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--ILDGDEYV 152

Query: 228 LSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++G K F+++   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R   T
Sbjct: 153 ITGAKTFITNGQQADLIIVVAKTDPSQGAAGISLIVAEADRPGFRRGKVLDKIGQRGQDT 212

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
            EL F +       LLG+     G ++ M  L    L  A+ +V+ M +++ + + Y R 
Sbjct: 213 SELFFDDVRVPRSHLLGETE-GQGFIQLMTQLPQERLIVAVGAVAAMELAVEQTLKYTRE 271

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIM 396
           R   G  +      K  +A+ A +   A       +   LA   D               
Sbjct: 272 REAFGRPVFGFQNTKFILAEAATETRIARVFLDYCIDLHLAGQLDVQT------------ 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             + K+W  + A  V+ + ++  GG GY+ E  I+R + +     I  G+   M
Sbjct: 320 VAMAKWWTTERAMKVLDDCLQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373


>gi|167827126|ref|ZP_02458597.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
          Length = 1326

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 792  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 849

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 850  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 908

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 909  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 967

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 968  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 1021

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 1022 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1054


>gi|76810463|ref|YP_331701.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|76579916|gb|ABA49391.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
          Length = 430

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   +  D  Y L+G K F+++   +D  I++A+     G    
Sbjct: 176 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 234

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G    +   K+G ++  T EL F       G LLG+ N   G V  M+ L
Sbjct: 235 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 292

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371
            +  L  AI +++    +LA  + Y R R   G  +ID    + A+A++  +I       
Sbjct: 293 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 352

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +  +LA   D A             A + KYW   +   VI   ++  GG GY+ E 
Sbjct: 353 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 400

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR + +S    I  G+   M
Sbjct: 401 PIARAWADSRVQQIYGGTNEIM 422


>gi|302754098|ref|XP_002960473.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii]
 gi|300171412|gb|EFJ38012.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii]
          Length = 429

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 159/392 (40%), Gaps = 69/392 (17%)

Query: 89  PGGERWDKVEFHPAWHALLRRSI---HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P G +WD  ++ P    +LR++      G+ C+      E V   + +++  A ++    
Sbjct: 65  PNGAQWDCDKYFPV--EVLRKAAGLGFGGMFCA------EDVGGSRLNRVDGAVIF--EA 114

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD-----WAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L  G + + +  +   +      R   D     W PK+   E+  +              
Sbjct: 115 LAYGDVSTTAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQMEFFSS-------------Y 161

Query: 201 GLTEKRGGTDIAAI---------TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE 250
            LTE   G+D A++         T+  Q      Y L+G K F+S   +SD ++++A+  
Sbjct: 162 CLTEPSSGSDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART- 220

Query: 251 GRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL 298
           G +G     CF    LLE G P GL + R ++K+G RS  T       V +  +N  G  
Sbjct: 221 GALGPKGISCF----LLEKGMP-GLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGRE 275

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                ++   ++  +I I    A  S  G +  L  A  YA  R   G  + +    +  
Sbjct: 276 GQGFAIAMAGLDGGRINI----ASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFK 331

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + A+  +    A + D    +      A   A + K +       +  +A++ 
Sbjct: 332 LADMQTALHASRLMVSNAAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQL 385

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+++  + R+ R+   ++IL G+   M
Sbjct: 386 HGGYGYLKDYPVERYLRDLRVHTILEGTNEIM 417


>gi|296271156|ref|YP_003653788.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093943|gb|ADG89895.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 35/280 (12%)

Query: 184 DPTNKAPMQKTS--VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS 240
           +P  +A + + +   A+ + ++E   G+D AAIT + ++ SDG + ++G K W  ++  +
Sbjct: 106 EPLKRAVLGRIAEGAAMAISISEPEAGSDAAAITCRAERTSDG-WVINGQKTWCTNAHAA 164

Query: 241 DAFIMLAQV-EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           D  +++A+  +G      +  F VPR        GL  + +    G   N   +L F++ 
Sbjct: 165 DGILLVARTSQGEKKHHGLTMFHVPR-----ETPGLTIKPIDTMNGPEVN---DLYFTDC 216

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349
              L  D  V        ++++ LD+  + ++   + +AE      + + R R   G  +
Sbjct: 217 --VLPEDAVVGEVDAGWRQLMVGLDTERLILAANTLGIAERAFDDCLEFVRERRQFGRPV 274

Query: 350 IDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
                +K  +AD+A +I  A  L +   R A+  D  +  + E++ A++ A        +
Sbjct: 275 GSFQAIKHRLADLATEIEYARLLVYSVARQADDPDRTRPLTRESSMAKLKA-------TE 327

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A A+  E M+ +GG GY  E ++ +H R +   +I  G+
Sbjct: 328 VAKAMALEGMQMMGGYGYSTEFTMVQHVRMALGATIYGGT 367


>gi|149922588|ref|ZP_01911017.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149816544|gb|EDM76040.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 600

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 34/269 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ----VEG---- 251
           LTE   G+D A+I ++ +   DG  + L G K W  +   +D F + AQ    V+G    
Sbjct: 170 LTEPSSGSDAASIRTRAKLSEDGEHWILDGSKMWITNGGFADLFTVFAQTQIEVDGEMKD 229

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304
           R+  F+V R        G+     ++K+G + ++T  + F        N  G + G   V
Sbjct: 230 RITAFIVERDF-----GGVESGPEEHKLGIKGSSTTTIHFDGCKVPKQNVLGEVGGGFKV 284

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   + + +  +    A   V G +  +  A  YA  R   G  L D  ++K+  A++AL
Sbjct: 285 AMTILNNGRFGL----AAGCVGGAKRLIGLAATYANERKQFGKSLSDFGLIKKKFAEMAL 340

Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              AA ++++      D+  +  + EAA +++ A     W       +  E ++ +GG G
Sbjct: 341 MTYAAESMTYMTCGLMDKGGRDYAIEAAMSKVAAS-EAMWI------IANECLQVMGGLG 393

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y +E    R  R+   N I  G+   + L
Sbjct: 394 YSKEYVFERFVRDGRINIIFEGTNEILRL 422


>gi|254504546|ref|ZP_05116697.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222440617|gb|EEE47296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 389

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P  ++  AI    LTE + G+D+A  T       D  Y L+G K W  +  ++D + + A
Sbjct: 112 PKTRSGEAISAFALTEPQSGSDVANSTMTATDDGDS-YVLNGEKTWISNGGIADVYTLFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
           +     G   +   +      G       + I     AT  L F++       L+G  N 
Sbjct: 171 RTGEAPGAKGLSAFVVTPDRQGFEITERLDTIAPHPLAT--LRFTDCRIKKSDLIG--NP 226

Query: 305 STGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    M +L    S + + + G  R +L EA+     R + G  L D  +++  IAD+
Sbjct: 227 GDGFKIAMSVLDIFRSTVAAAALGFARRALDEALERVSTRQIQGAPLADLQMVQGHIADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ALD+ AA  L +R A + D    R + EAA A++ A        + A  VI +A++  GG
Sbjct: 287 ALDVDAAALLIYRAAWAKDSGAPRVTREAAMAKLFA-------TEQAQQVIDKAVQLHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G     ++ + YRE  A  I  G+
Sbjct: 340 DGVRSGETVEKLYREIRALRIYEGA 364


>gi|261420445|ref|YP_003254127.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319768113|ref|YP_004133614.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376902|gb|ACX79645.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317112979|gb|ADU95471.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 594

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 47/313 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            R        G+     + K+G +S++T       V +   N  G       +  G V  
Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL        + +V G + +L   + YA +R      +    + +   A +A  + AA
Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318

Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  +R    FDE             K  ++  A   I   + K++  ++   ++ E ++
Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465
             GG G+++E  I R YR+S  N I  G+     L V            L L +K   L 
Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAVKGELPLFQKAQQLQ 438

Query: 466 EQLFSTLEQDLGS 478
           E+L     ++ GS
Sbjct: 439 EELMMMAAEEPGS 451


>gi|163844406|ref|YP_001622061.1| hypothetical protein BSUIS_B0224 [Brucella suis ATCC 23445]
 gi|163675129|gb|ABY39239.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 380

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 28/246 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254
           LTE   G+D A++ +   +  D  Y L+G K F++ +P++D F ++A+    V+G  G  
Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F+V R     SP GL   +   K+G +   T ++ F N       L+G +    G    
Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           MK+L   D   + ++ +    AE  +     R   G  + D  +++  +AD   +I AA 
Sbjct: 237 MKVL---DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAK 293

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +    A   D  ++ S EA+ A       K +  +M   V    ++  GG+GY+ E +I
Sbjct: 294 CMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAI 346

Query: 431 ARHYRE 436
            R YR+
Sbjct: 347 ERFYRD 352


>gi|170740707|ref|YP_001769362.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194981|gb|ACA16928.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 380

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 20/261 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y L G K F+S   + D ++++ +  G  G   +  
Sbjct: 125 LTEPGSGSDAAALRTTARREGDA-YVLDGTKQFISGAGAVDLYVVMVRT-GEPGPKGIST 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313
           L+      GL +   + K+G  +  T ++ FS       N  G       ++   ++  +
Sbjct: 183 LVVPADAPGLSFGPNERKMGWNAQPTRQVIFSGCRVPAANRLGEEGIGFKIAMAGLDGGR 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I       S+ G + +L +A+ YAR R   G  L     ++  +AD+A ++ AA  + 
Sbjct: 243 INI----GACSLGGAQSALDKALTYARERRAFGQRLDAFQALQFRLADMATELEAARLMI 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A + D    R +  A AR  A + K +       V   A++  GG GY+ E  I + 
Sbjct: 299 YAAAAALD----RGDPDATAR--AAMAKRFATDRGFQVADAALQLHGGYGYLSEYGIEKI 352

Query: 434 YRESPANSILLGSGNAMVLDV 454
            R+   + IL G+   M L V
Sbjct: 353 VRDLRVHQILEGTNEIMRLIV 373


>gi|144898057|emb|CAM74921.1| glutaryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 392

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A++ ++ +K+ DG Y LSG K W  +SP++D  ++ A+    +G++  
Sbjct: 134 FGLTEPDSGSDPASMRTRAKKV-DGGYLLSGQKMWITNSPIADIAVVWAKSDGHDGKIKG 192

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R        G    +++ K+  R++ T E+     F     LL + +   GP    
Sbjct: 193 FVVER-----GTKGFTTPKIEGKLSLRASVTGEIVLDEAFVPEDNLLPNASGLAGP---- 243

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   ++   V  AE     A  Y   R   G  L    +++  +A++  DIA
Sbjct: 244 --FGCLNKARYGIAWGVVGAAEFCWHAARQYTLDRKQFGRPLAANQLIQFKLANMQTDIA 301

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A   + R+    D       + ++A     + K   C  A  +   A +  GG+G  +E
Sbjct: 302 LALQAAIRVGRMMD-------DGSWAPEAVSLIKRNNCVKALDIARVARDMHGGNGIADE 354

Query: 428 RSIARH 433
             + RH
Sbjct: 355 FQVMRH 360


>gi|52842051|ref|YP_095850.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54297736|ref|YP_124105.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris]
 gi|52629162|gb|AAU27903.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53751521|emb|CAH12939.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris]
          Length = 389

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  Q +   D  Y L G
Sbjct: 115 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 159

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  + P +D  ++ A+ + + G   +   ++E G P     Q+L +K+G R + T E
Sbjct: 160 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 218

Query: 289 LEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           L F        N  G +   + V    ++  + ++    A   V  M+  +   + Y   
Sbjct: 219 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 274

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      + +   ++  +AD+  D+ A  A  + +A + D  +   ++AA   +      
Sbjct: 275 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  ++++ +GG+GYI E    R  R++    I  G+
Sbjct: 329 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 372


>gi|332850446|ref|ZP_08432766.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871897|ref|ZP_08440309.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332875167|ref|ZP_08443000.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332730717|gb|EGJ62028.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731111|gb|EGJ62412.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332736611|gb|EGJ67605.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 104 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 151 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 209

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 210 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 259

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 260 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 318

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 319 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 371

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 372 QRIYGGTNEIM 382


>gi|320334371|ref|YP_004171082.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319755660|gb|ADV67417.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 393

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 30/266 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GR--- 252
           GLTE   G+D   + ++ ++  DG + ++G K F++   +   +++LA+ +    GR   
Sbjct: 123 GLTEPGSGSDSGGLQTRAEQQPDGSWIINGSKNFITQGSVGGTYVILARTDAPRPGRSKN 182

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  F+  R        G    R ++K+G RS+ T +L F +        L       +
Sbjct: 183 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDMRVPETALLGTRGQAFK 238

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
           D  ++  LD   + +  M + L  A       Y   R   G  +     +   +AD+   
Sbjct: 239 D--VMRVLDGGRIGIGAMGLGLGRAAFDFATRYTLEREQFGKAIAHNQAIAFKLADMDTH 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L  + A+  D  +  +  AA A++ A       C        +A++ +GG GYI
Sbjct: 297 LEAARLLLRKAADLKDAGRDFTVAAARAKLYATEVGVQACD-------DAIQMLGGYGYI 349

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
           +E  + R++R++    I  G G + V
Sbjct: 350 KEYPVERYWRDNRLTRI--GEGTSEV 373


>gi|124002490|ref|ZP_01687343.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
 gi|123992319|gb|EAY31687.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
          Length = 385

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 15/282 (5%)

Query: 176 PKIFSREYDPTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           P I     + T +  + KT      + + +TE   G+D+ ++ +  +   D  Y ++G K
Sbjct: 102 PYILEYGSEETKQKYLPKTVSGESILAIAMTEPGAGSDLQSMRATAEDKGDH-YLVNGSK 160

Query: 233 WFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+++  ++D  ++  + +   G      LL + +  G    +   K+G  +  T EL F
Sbjct: 161 TFITNGYLADLVVVAVKTDPAQGAKGTSLLLMEAAAEGFSKGKPFEKVGLHAQDTCELFF 220

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N       LLG+     G + +      L   + ++     +L   I Y + R   G  
Sbjct: 221 DNVKVPKENLLGEEGKGFGYLMNKLAQERLVVGLGAIGAAEKALETTIQYTKERKAFGKS 280

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      K  +A++A ++      +       DE K     A+       + KYW   + 
Sbjct: 281 VAQFQNTKYKMAELATEVQIGRVFADYCTELHDEGKLDGATAS-------MVKYWLTDLQ 333

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             V  E ++  GG GYI +  IAR Y ++    I  G+   M
Sbjct: 334 CKVADECVQLHGGYGYIWDYQIARSYADARVQRIYAGTNEIM 375


>gi|327190845|gb|EGE57910.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 381

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 39/291 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P   + + PK+ S E+  +             L ++E   G+D+ ++  + ++  D  Y
Sbjct: 104 SPEQKRRYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMRLRAERKGD-RY 149

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284
            L+G K W  ++P +D  ++ A+ +  VG   +  L+ E G P G    +  +K+G R +
Sbjct: 150 ILNGTKFWITNAPHADVLVVYAKTDPAVGAKGISALIIEKGMP-GFSVSKKLSKLGMRGS 208

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEA 335
            T EL F +       L+G         E +KIL+     + A+++      M+  L   
Sbjct: 209 DTAELVFEDCEVPAEALMGREG------EGVKILMSGLDYERAVLAAGPLGIMQACLDVV 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y R R   G  + D  +M+  IAD+ + + +A A  + +A + D  ++   +AA A +
Sbjct: 263 LPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSARAYVYSVARACDAGRATRTDAAAAIL 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A        + A  V  EA++ +GG+GY ++  + R  R++    I  G+
Sbjct: 323 FA-------SENAVKVSLEAIQALGGAGYTKDWPVERFLRDAKLYDIGAGT 366


>gi|218892413|ref|YP_002441280.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218772639|emb|CAW28422.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 384

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  + ++A+        G +
Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGQHYVLNGTKRFITNAPQAGIYTVMARTNPAIRGAGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G   
Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI
Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345

Query: 426 EERSIARHYRE 436
            +  I R YR+
Sbjct: 346 GDYGIERFYRD 356


>gi|89098398|ref|ZP_01171282.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89086947|gb|EAR66064.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 383

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 30/269 (11%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254
           +   + +TE   G+D+A I++      D  Y L G K F+++ M +D  I+  + + +  
Sbjct: 121 IITAIAMTEPGAGSDLAGISTTAVDEGD-YYLLHGQKTFITNGMHADLVIVACKTDPQA- 178

Query: 255 CFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD 301
              VP+      L  +    G    R  +KIG  S  T EL F        N  G     
Sbjct: 179 ---VPKHKGISLLAVERGCKGFSRGRKLDKIGLHSQDTAELIFEDCLVPKENLIGEEGQG 235

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  ++  ++++    AI + +   V L   + Y + R   G  + +    +  +A+
Sbjct: 236 FQYMMKKLQQERLVV----AIAAQAASEVMLELTLSYVKSREAFGRPVGNFQNTQFKMAE 291

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A DI    +    L     E K  +++ + A       K+     A  + AE ++  GG
Sbjct: 292 MATDIEMGRSFLDTLNKEHVEGKDITQKVSMA-------KWKLTDNARRIAAECLQLHGG 344

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+EE  IAR YR+ P  SI  G+   M
Sbjct: 345 YGYMEEYEIARRYRDIPVASIYAGTNEIM 373


>gi|167644246|ref|YP_001681909.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346676|gb|ABZ69411.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 382

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 42/276 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P I S E             +     LTE   G+D AA+ ++  +  D  Y L+G K 
Sbjct: 109 WLPGIASGE-------------IVTSFALTEAEAGSDSAAVQTRATRDGDD-YVLNGSKR 154

Query: 234 FLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++++   +  F ++A+          V  FLVPR L      GL   + + K+G +    
Sbjct: 155 YITNAGKASLFTVMARTNPGAKGGSGVSAFLVPRDLP-----GLTVGKPEKKMGQQGAHI 209

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340
            ++ F N     +   N      E  K+ +  LD   + ++ + V +AE      + YA 
Sbjct: 210 HDVTFDNV---RVPAWNRLGAEGEGFKVAMQVLDRGRLHIAAVCVGVAERLLVDCVAYAS 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  IAD   +  AA AL    A   D  +  + EAA A++ A   
Sbjct: 267 ERKQFGQPIASFQLIQAMIADSKTEALAARALVLETARKRDAGEGVTLEAAAAKLFA--- 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +M   V   A++  GG+GY+ +  I R YR+
Sbjct: 324 ----SEMVGRVADRAVQIFGGAGYVADYGIERLYRD 355


>gi|119186447|ref|XP_001243830.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 438

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 35/303 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + K W P++               T+      L+E   G+D  A+ ++  K   G Y
Sbjct: 158 SAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-Y 202

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K W  +S  +  FI+ A ++   G   +   L +    G    + + K+G R+++
Sbjct: 203 KINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLVEKDTKGFSIAKKEKKLGIRASS 262

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHY 338
           T  L F +     +   N+     +  K  I  L+   + ++     LA       A + 
Sbjct: 263 TCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYI 319

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-A 397
              R   G ++     M+  +A    DIAAA AL +  A        R +EA    +M A
Sbjct: 320 WNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAA--------RKKEAGQDFVMDA 371

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +  ++A  V + A+E +GG G++ E    + +R+S   +I  G+ N  +  +   
Sbjct: 372 AMAKLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKT 431

Query: 458 LEK 460
           L+K
Sbjct: 432 LQK 434


>gi|313675129|ref|YP_004053125.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312941827|gb|ADR21017.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 599

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 61/300 (20%)

Query: 202 LTEKRGGTD-----IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RV 253
           LTE   G+D       A+ ++ +K     Y L+G K W  ++ ++D F + A++E    +
Sbjct: 152 LTEPDAGSDANSGKTKAVYNEAEKA----YYLTGQKMWITNAGIADVFTVFAKIEDDENL 207

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGD-------- 301
             F+V +  E     GL     ++K+G R+++T ++ F N        LLG         
Sbjct: 208 SAFIVEKGFE-----GLTLGEEEDKMGIRASSTRQV-FLNDVKVPEENLLGQRGEGFKMA 261

Query: 302 LNV-STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKR 357
           LNV STG ++            + + G+ VS   +  A+ YA  R   G  +     +++
Sbjct: 262 LNVLSTGRIK------------LGIGGLGVSKKAIDYAVEYAVNRKQFGQSISSFGAIQQ 309

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR------IMAPITKYWCC 405
            +A + +   A  A ++R     D+ +        S E A A+      I   I K +  
Sbjct: 310 KLAKMVVKTYALQAAAYRTGELIDQKEEEYLKSGMSMEEAKAKAVSAYGIECAIIKVFGT 369

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVLDVLNLLEKGTN 463
           +    V+ E ++  GG G+ EE  +AR YR+S  + I  G+   N M++ V  LL+K  N
Sbjct: 370 EAQDFVVDEGLQIFGGMGFSEEAPMARLYRDSRISRIFEGTNEINRMLI-VDMLLKKAMN 428


>gi|167818752|ref|ZP_02450432.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
          Length = 1324

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 789  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 846

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 847  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 905

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 906  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 964

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 965  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 1018

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 1019 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1051


>gi|90416754|ref|ZP_01224684.1| putative glutaryl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2207]
 gi|90331507|gb|EAS46743.1| putative glutaryl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2207]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFL 257
            GLTE   G+D   + S+ +  +DG Y L+G K W  +SP +D F++ A+ +  ++  F 
Sbjct: 139 FGLTEPDYGSDPGGMVSRARS-TDGGYLLNGTKTWISNSPFADVFVVWAKTDDEQIRGF- 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G P GL   +++ K+  R + T ++   + F     LL ++    GP      
Sbjct: 197 ---ILEKGMP-GLSAPKIEGKLSLRVSTTGQIVMQDVFVAEEQLLPNVKGLKGPFS---- 248

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAA 369
              L++A   ++   +  AEA  +A R +       ++P     +++  +AD+  DI+  
Sbjct: 249 --CLNNARYGIAWGSLGAAEACWHAARTYTMERKQFNRPLAATQLIQLKLADMQTDISLG 306

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R     D++    E       +  + K   C  A  +  +A + +GG+G  +E S
Sbjct: 307 LQGCLRAGQLMDDSNISPE-------LISLIKRNSCSKALNIARKARDMLGGNGISDEYS 359

Query: 430 IARH 433
           + RH
Sbjct: 360 VMRH 363


>gi|303317764|ref|XP_003068884.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240108565|gb|EER26739.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320038916|gb|EFW20851.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 438

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 35/303 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + K W P++               T+      L+E   G+D  A+ ++  K   G Y
Sbjct: 158 SAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-Y 202

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K W  +S  +  FI+ A ++   G   +   L +    G    + + K+G R+++
Sbjct: 203 KINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLVEKDTKGFSIAKKEKKLGIRASS 262

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHY 338
           T  L F +     +   N+     +  K  I  L+   + ++     LA       A + 
Sbjct: 263 TCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYI 319

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-A 397
              R   G ++     M+  +A    DIAAA AL +  A        R +EA    +M A
Sbjct: 320 WNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAA--------RKKEAGQDFVMDA 371

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +  ++A  V + A+E +GG G++ E    + +R+S   +I  G+ N  +  +   
Sbjct: 372 AMAKLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKT 431

Query: 458 LEK 460
           L+K
Sbjct: 432 LQK 434


>gi|226954494|ref|ZP_03824958.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834765|gb|EEH67148.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 387

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 25/317 (7%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAI-GLGL 202
           L AG  M+ + +    ++LM    VH   AP I  F  E       P   +   I  L +
Sbjct: 74  LLAGVEMAKAASGGVHISLM----VHTIGAPPIQHFGSEELKAKVLPDIISGEKISALAI 129

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPR 260
           TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  
Sbjct: 130 TEPGGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGADGISM 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   +  
Sbjct: 189 LLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMER 247

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL----S 373
               +++     V   EA+ +A++R   G  L+D  V++  + D+A  +    AL    +
Sbjct: 248 FFLGVVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLEETA 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +++     +      + +  + +A  T  +C          A++ +GG G++      R 
Sbjct: 308 WKMTQPQLQGADLVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKSERI 360

Query: 434 YRESPANSILLGSGNAM 450
           YRE   N I  G+   M
Sbjct: 361 YREVKVNMIGGGAEEIM 377


>gi|126443146|ref|YP_001061749.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126222637|gb|ABN86142.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 1291

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|307610525|emb|CBX00111.1| hypothetical protein LPW_18561 [Legionella pneumophila 130b]
          Length = 372

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  Q +   D  Y L G
Sbjct: 98  QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 142

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  + P +D  ++ A+ + + G   +   ++E G P     Q+L +K+G R + T E
Sbjct: 143 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 201

Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           L F        N  G +   + V    ++  + ++    A   V  M+  +   + Y   
Sbjct: 202 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 257

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      + +   ++  +AD+  D+ A  A  + +A + D  +   ++AA   +      
Sbjct: 258 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 311

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  ++++ +GG+GYI E    R  R++    I  G+
Sbjct: 312 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 355


>gi|296162124|ref|ZP_06844921.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887630|gb|EFG67451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 379

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 37/306 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    ++W P             P+ +    + + +TE   G+D+ +I
Sbjct: 93  SDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIAMTEPGTGSDLKSI 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +   +  D  Y ++G K F+S+ ++ D  +++ + +   G   V  ++ +    G    
Sbjct: 140 RTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSLIMVETDRAGFRRG 198

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMS 324
           R   K+G  +  T EL F N     G L+G+ N      +   P E + I +Y       
Sbjct: 199 RKLEKVGQAAADTAELFFDNVRVPAGNLIGNENGGFIHLMEELPQERLIIAVY------C 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + +   L   + Y + R      + D    K  +AD+     A   L         E K
Sbjct: 253 AAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYIREHMERK 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A++ A     W C      I E ++  GG GY+ E  IAR + +     I  
Sbjct: 313 LTLQEAAIAKLFA-TEAMWKC------IDEMVQLHGGYGYMLEYPIARAFADMRVTRIFG 365

Query: 445 GSGNAM 450
           G+   +
Sbjct: 366 GTSEVL 371


>gi|302865185|ref|YP_003833822.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315501734|ref|YP_004080621.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302568044|gb|ADL44246.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315408353|gb|ADU06470.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 398

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 29/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEGRV 253
           ++E   G+D++AI S+  +  D  Y L+G K W  +   S     L +       V G +
Sbjct: 129 MSEPECGSDVSAIKSKAVRDGDN-YVLNGQKMWLTNGAYSSVVATLVKTDTGADSVYGNM 187

Query: 254 GCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVST 306
             FL+ +  E G   +  GL      +K+G +   T E+            L G+  V  
Sbjct: 188 STFLLEK--EPGFGETAPGLTIPGKIDKMGYKGVETTEMVLDGVTVPASAVLGGEEKVGR 245

Query: 307 GPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + M  I +   +      G+ +   E A+ YA++RH  G  L     +   +A++  
Sbjct: 246 GFYQMMDGIEVGRVNVAARACGISIRAFELAVAYAQQRHTFGQPLARHQAVAFKLAEMGT 305

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA AL    A   D  +    EA  A+++A     +C +    V+ EA    GG GY
Sbjct: 306 KIEAAHALMVNAARLKDAGQRNDVEAGMAKLLA---SEYCAE----VVQEAFRIHGGYGY 358

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 359 SKEYEIERLMREAP--FLLIGEGTSEI 383


>gi|217424565|ref|ZP_03456063.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|217392489|gb|EEC32513.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
          Length = 1289

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|170940105|emb|CAP65331.1| unnamed protein product [Podospora anserina S mat+]
          Length = 441

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 26/296 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   ++Y      P   T+      L+E   G+D  A+ ++     +G Y ++G K 
Sbjct: 159 WGSETLKKKY-----LPKLATNTVGSFCLSEPVSGSDAFALATKATPTENG-YKINGSKM 212

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +S  ++ FI+ A ++   G   +   + D    G    + + K+G ++++T  L F 
Sbjct: 213 WITNSMEAEFFIVFANLKPEQGYKGISAFIVDKGMKGFSIAKKEKKLGIKASSTCVLNFD 272

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSG 346
           +     +   N+     +  K  I  L+   + +      LA      A+ Y        
Sbjct: 273 DV---EVPKENLLGQEGQGYKYAIQILNEGRIGIGAQMTGLALGAWENAVKYVWNDRKQF 329

Query: 347 GILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWC 404
           G L+ +   M+  IA    +IAAA AL +  A        R +EA    +M A + K + 
Sbjct: 330 GKLVGEFQGMQHQIAQSYTEIAAARALVYNAA--------RKKEAGEDFVMDAAMAKLYA 381

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 382 SQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKMLQK 437


>gi|325277814|ref|ZP_08143368.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324097060|gb|EGB95352.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 383

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 31/271 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   IG   LTE + G++   + ++ + I DG + ++G K F+S+       ++  
Sbjct: 113 PRLATGEVIGCFCLTEPQAGSEAHNLRTRAELI-DGQWVINGAKQFVSNARRAGLAIVFA 171

Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           V     G+ G   FLVP         G    R ++K+G R++ T  + F N       LL
Sbjct: 172 VTDPDLGKKGLSAFLVP-----ADNPGFKVDRSEHKMGIRASDTCAVTFDNCRVPAANLL 226

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+    L ++   +E  +I I    A  ++   R +   A+ Y+R R   G  + +   +
Sbjct: 227 GERGKGLAIALSNLEGGRIGI----AAQALGIARAAFEAALGYSRDRVQFGKPINEHQSI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+ + + AA  L    A      +    EA+ A++ A        +MA  V + A
Sbjct: 283 ANLLADMQVQVNAARLLILHAARLRSAGRPCLSEASQAKLFAS-------EMAERVCSMA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY+E+  + R+YR++    I  GS
Sbjct: 336 IQVHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|121595295|ref|YP_987191.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120607375|gb|ABM43115.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 398

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 25/266 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ +   K+ DG Y L G+K W  +
Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATHAYKV-DGGYRLKGNKMWITN 172

Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A +VE       +   + D    GL    +  K+G R++ T E+   + F
Sbjct: 173 SPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                   ++    GP         L+SA   ++   +  AE     A  Y   R   G 
Sbjct: 233 VPEENAFPEVRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C  
Sbjct: 287 PLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365


>gi|323525673|ref|YP_004227826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323382675|gb|ADX54766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 382

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 20/243 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   +  D  Y L+G K F+S+       I+ A  +   G      
Sbjct: 128 LTEPHAGSDTAALRTGAHRDGDH-YVLNGTKQFISNGSEAGVGIVFAITDKAAGKRGAST 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313
            + D    G    R+++K+G  +  T ++          N  G          G V D +
Sbjct: 187 FIIDPKAPGYHVTRIESKLGQHTAHTAQIALEDYRVPAENLLGAEGNGYRTVMGGVSDGR 246

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I    A +S    R +L  A+ YAR R   G  L     +   +AD+A  +  A    
Sbjct: 247 IGI----AFISAGVARGALDAALKYAREREAYGAPLNRLQAVAFDLADMAAQVEIAWQYC 302

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A   D      +EA+       I K +  +MA  V +EA++  GG GY+ +  + R+
Sbjct: 303 LHAARLRDAGIDCIKEAS-------IAKLFASEMAEKVCSEAVQIHGGYGYLSDFPVERY 355

Query: 434 YRE 436
            R+
Sbjct: 356 LRD 358


>gi|226362565|ref|YP_002780343.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241050|dbj|BAH51398.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 35/306 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T    + + PK+ + E   T             + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266
            A+++  +   D +       W  ++  S    +L + + +      G  +V  L+E G 
Sbjct: 133 QAMSTTAKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIV--LVEHGP 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             GL   R   K+G +   T EL F N        L G      G +        +  A 
Sbjct: 191 --GLTVSRDLPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVAC 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D 
Sbjct: 249 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P   +
Sbjct: 309 GDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL--M 359

Query: 443 LLGSGN 448
           ++G G 
Sbjct: 360 IVGEGT 365


>gi|167033440|ref|YP_001668671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859928|gb|ABY98335.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 383

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 48/314 (15%)

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           G +MS   SV    ++A  T  +  + W P++ S E               IG   LTE 
Sbjct: 85  GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G      FLVP
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312
                 +P G    R ++K+G R++ T  + F N       LLG+    L ++   +E  
Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANLLGERGKGLAIALSNLEGG 243

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L
Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRVQFGKPINEHQSIANLLADMQVQVNAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  + R
Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352

Query: 433 HYRESPANSILLGS 446
           +YR++    I  GS
Sbjct: 353 YYRDARITQIYEGS 366


>gi|329851045|ref|ZP_08265802.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
 gi|328839891|gb|EGF89463.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
          Length = 371

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 22/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++  +  D  + L+G K F+S + +SD ++++A+++  +  FLV +
Sbjct: 121 LTEPGSGSDAASMKTRAVRDGDS-FVLNGSKQFISGAGVSDLYVVMARLDDGISTFLVVK 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
                   GL +   + K+G  +  T ++ F N     +   N+   P +  K  +    
Sbjct: 180 -----DTPGLSFGANEKKMGWNAQPTRQVTFDN---LCIPADNLLGTPGDGFKYAMKGLD 231

Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +L  A+ YA  R   G  L      +  +AD+  +++A+  L +
Sbjct: 232 GGRLNVAACSLGGAQDALDRALAYAGERSQFGKHLNAFQATQFKLADMETELSASRTLLY 291

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D   +++ +A     MA   K +       +  +A++  GG GY+ +  + R  
Sbjct: 292 EAAAKLD---AKTPDATRWCAMA---KRFVTDTCSKIANDALQIHGGYGYLHDYGVERIV 345

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 346 RDLRVHQILEGTNEIM 361


>gi|260428261|ref|ZP_05782240.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260422753|gb|EEX16004.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 387

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKKND-RFVLNGNKYWITNGPDADTLVVYAKTDPDAGSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L + S  G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKSMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFQNILGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLTERKQFGQAIGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370


>gi|126456025|ref|YP_001074694.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242311146|ref|ZP_04810163.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|126229793|gb|ABN93206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242134385|gb|EES20788.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 1283

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 749  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 806

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 807  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 865

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 866  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 924

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 925  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 978

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 979  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1011


>gi|119386341|ref|YP_917396.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376936|gb|ABL71700.1| isovaleryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 386

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 120/257 (46%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E+  G+D+  +  + +K +D  Y L+G+K W  ++P +   ++ A+ +   G   +
Sbjct: 128 LAMSEEGAGSDVVGMKLRAEKRND-RYVLNGNKYWITNAPDAHTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G       +K+G R + T EL F +    F  +LG         + +++L
Sbjct: 187 TAFIVERGMKGFSTSPHFDKLGMRGSNTGELIFEDCEVPFENVLG------AEGKGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M   L E + Y + R   G  +    +M+  IAD+ + +  A
Sbjct: 241 MSGLDYERLVLSGIGTGIMAACLDEVMPYVKERKQFGQPIGSFQLMQGKIADMYVALNTA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  K   ++AA A +       +  + A     +A++ +GG+G++ +  
Sbjct: 301 RAYVYEVAKACDAGKVTRQDAAGAVL-------YASEQAMVQAHQAVQALGGAGFLNDSV 353

Query: 430 IARHYRESPANSILLGS 446
           ++R +R++    I  G+
Sbjct: 354 VSRLFRDAKLMEIGAGT 370


>gi|167565173|ref|ZP_02358089.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis EO147]
          Length = 1282

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 18/282 (6%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+++ AI S  Q+I    + +SG K W  SS  +    + A+     G  ++  
Sbjct: 752  LTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSSAWAGVINVFAKQADGTG--MIGL 809

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R     T+ L+ +  +    LG L       +       
Sbjct: 810  AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGALGQGMAVAQQTMNFAR 868

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V GM+   A+ +H Y  RR +  G+L+D P+ ++ + D+   I    AL  +L
Sbjct: 869  LGIGAVCVGGMK-RCAQLMHRYGARRQIGTGLLLDNPLSRQRLGDLRHRIDGLNALIEQL 927

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+         I K    +       E M+ +GG GYIE     + +R+
Sbjct: 928  AADFDAGRDAPEDGLL------IAKILGSEFLSQSSDELMQMLGGRGYIETNLAPQIFRD 981

Query: 437  SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            +    I  G    ++  + + L  G++    L   L++  G+
Sbjct: 982  ARLPRIFEGPTETLLAHLGSRLLNGSD---DLLGYLDERTGA 1020


>gi|318059027|ref|ZP_07977750.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318076807|ref|ZP_07984139.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 390

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA++++  +  D  + L+G K F+S   +    ++    G  G   +   
Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L D    GL +   ++K+G  +  T       V +      G       ++   +   ++
Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  
Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++ D    ++ +      +  + K +       +   A++  GG GY+ E  I +  
Sbjct: 308 QAADALDRKDPQAPQ------LIAMAKRFATDSGFHIADRALQLHGGYGYLHEYGIEKIV 361

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL GS   M
Sbjct: 362 RDLRVHQILEGSNEIM 377


>gi|167848625|ref|ZP_02474133.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei B7210]
          Length = 1294

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 989  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021


>gi|157374123|ref|YP_001472723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316497|gb|ABV35595.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 391

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ ++I  G Y ++G K W  +SP++D FI+ A++EG++  F  
Sbjct: 136 FGLTEPDAGSDPGGMKTRAERIEGG-YRINGAKIWITNSPIADIFIVWAKLEGKIRGF-- 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G P GL   +++ K   R++ T E+   N       L+ ++    GP       
Sbjct: 193 --ILEKGMP-GLSAPKIEGKFSLRASVTGEIVMDNVEVPETALMPNVEGLKGPFG----- 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L+ A   ++   +  AE   +A R++    I  ++P+    +    L +   T +S  
Sbjct: 245 -CLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLASNQLIQKKL-VDMQTEISLG 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L       +    +A     ++ I +  C K A  +   + +  GG+G  +E  I RH
Sbjct: 303 LFACLQAGRLMDNDALAVEAISMIKRNSCGK-ALDIARMSRDMHGGNGISDEFHIIRH 359


>gi|148359370|ref|YP_001250577.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|296107417|ref|YP_003619117.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281143|gb|ABQ55231.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|295649318|gb|ADG25165.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 386

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  Q +   D  Y L G
Sbjct: 112 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 156

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  + P +D  ++ A+ + + G   +   ++E G P     Q+L +K+G R + T E
Sbjct: 157 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 215

Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           L F        N  G +   + V    ++  + ++    A   V  M+  +   + Y   
Sbjct: 216 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 271

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      + +   ++  +AD+  D+ A  A  + +A + D  +   ++AA   +      
Sbjct: 272 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  ++++ +GG+GYI E    R  R++    I  G+
Sbjct: 326 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 369


>gi|126642320|ref|YP_001085304.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii ATCC 17978]
          Length = 363

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 73  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 119

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 120 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 178

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 179 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 228

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 229 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 287

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V  + ++  GG GY+ E  I+R + ++  
Sbjct: 288 YQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDARI 340

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 341 QRIYGGTNEIM 351


>gi|21221230|ref|NP_627009.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256787588|ref|ZP_05526019.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771481|ref|ZP_06530859.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|5524294|gb|AAD44195.1|AF142581_1 acyl-CoA dehydrogenase [Streptomyces coelicolor]
 gi|7544043|emb|CAB87216.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289701680|gb|EFD69109.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 386

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 50/316 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
           L  T    ++W P++ S E             +    GLTE  GG+D  A  +  +   +
Sbjct: 100 LFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLDEA 146

Query: 223 DGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQ 273
              + ++G K F+++  +D    + +  V GR       +   +VP     G+P G    
Sbjct: 147 TNEWVINGTKCFITNSGTDITGLVTVTAVTGRKPDGRPLISSIIVP----SGTP-GFTVA 201

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +K+G  ++ T EL F++       LLG+L          + L  LD   ++++ +  
Sbjct: 202 APYSKVGWNASDTRELSFADVRVPAANLLGELGRGYA-----QFLRILDEGRVAIAALGT 256

Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            LA     E++ YA+ RH  G  +     ++  IAD  +++ A TA   RLA  + +A S
Sbjct: 257 GLAQGCVDESVAYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDAAS 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R       +  A + K +   +A     +A +  GG G++ E  +AR +R+  A  + +G
Sbjct: 310 RLVAGEPFKKEAALAKLYSSTVAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILEIG 367

Query: 446 SGNAMVLDVLNLLEKG 461
            G + V  +L   E G
Sbjct: 368 EGTSEVQRMLIARELG 383


>gi|284163794|ref|YP_003402073.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013449|gb|ADB59400.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 387

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 23/246 (9%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-- 252
           A+G  GLTE   G++ +A+ ++ ++  DG Y L+G K W  +SP+SD  ++ A+ +    
Sbjct: 124 AVGCFGLTEPEHGSNPSAMETRAERDGDG-YILNGSKTWITNSPISDVAVVWARDQSDPD 182

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             V  FLV     +   +G+   ++  K+  R++ T E+  ++       +L  ++   G
Sbjct: 183 TPVRGFLV-----ETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKG 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           P+  +    Y   A  +V   R    EA  YA+ R   GG +    + +R +A++   I 
Sbjct: 238 PLSCLTQARY-GIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQIT 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L++RLA   +  + R +  + A       K    + A      A E +GG+G   +
Sbjct: 297 LAQLLAYRLAELKERGEMRPQHVSMA-------KRNNVRTARDQARIAREMLGGNGITTD 349

Query: 428 RSIARH 433
            S  RH
Sbjct: 350 YSPMRH 355


>gi|126739316|ref|ZP_01755009.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719416|gb|EBA16125.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 381

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ +K ++G Y L+G+K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              +EDG+P GL +   + K+G +S  T +++F +        +  +    E+ K   Y 
Sbjct: 183 --YVEDGTP-GLSFGGQEIKMGWKSQPTSQVQFDDC------KIPANNLVGEEGKGFRY- 232

Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             A+M + G R+++A              + Y   R   G  +     ++  +AD+ +++
Sbjct: 233 --AMMGLDGGRLNIASCSLGAAQAGLDMTLQYMSERKAFGKSIDQFQGLQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     + A   D+       A  A     + K +  +    ++ + ++  GG GY+ 
Sbjct: 291 QAARVFLRQAAWKLDKG------APDASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLA 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  I +  R+   + IL G+   M
Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368


>gi|297563334|ref|YP_003682308.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847782|gb|ADH69802.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 384

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFL 257
           GL+E+  G+D A++ +Q     DG + L+G K W  ++ +S  + +LA    EG  G  +
Sbjct: 127 GLSEREAGSDTASMRTQAVADGDG-WILNGQKSWITNAGVSKYYTVLAVTDPEGARGRNV 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
              +L      G      + K+G + + T EL F N    + GD  +   P E +KI L 
Sbjct: 186 SAFVLH-ADDEGFTLGEPERKLGIKGSPTRELFFDNV--RVPGD-RIVGAPGEGLKIALR 241

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +++    V +A     +A+ Y + R   G  + D   ++  +AD+A+ +  A  
Sbjct: 242 TLDHTRVTIGAQAVGIAQGALDQAVAYVKERKQFGRHIADFQGVQFMLADMAMKLETARQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +  A     AKS   +           K +    A  +  +A++ +GG+GY+++  + 
Sbjct: 302 MVYVAA-----AKSERGDDDLP-FYGAAAKCFASDAAMEITTDAVQLLGGAGYVKDFPLE 355

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 356 RMMRDAKITQIYEGT 370


>gi|254488179|ref|ZP_05101384.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
 gi|214045048|gb|EEB85686.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
          Length = 384

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 36/296 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQK 220
           ++L  TP   + W PK               ++  AI    LTE + G+D+A  T   ++
Sbjct: 102 ISLFGTPEQQEAWLPKT--------------RSGAAISAFALTEPQSGSDVANSTMTAER 147

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y L+G K W  +  ++D + + A+     G   L   +L  G P      RL+  
Sbjct: 148 DGDD-YVLNGEKTWISNGGIADVYTLFARTGEAPGARGLSAFILPAGLPGFEIADRLQ-V 205

Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLA 333
           I     AT  L F++       +LG      G    M +L    S + + + G  R +L 
Sbjct: 206 IAPHPLAT--LRFTDCRVPASAMLG--AQGQGFAIAMSVLDVFRSTVAAAALGFARRALD 261

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAY 392
           EA+     R V G  L D  +++  IAD+A+D+ A+  L +R A   D+   R + EAA 
Sbjct: 262 EALKRVSTREVQGKPLADLQMVQGHIADMAVDVDASALLIYRAAWLKDQGAPRVTREAAM 321

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++ A          A  VI +A++  GG G     ++   YRE  A  I  G+ +
Sbjct: 322 AKLFA-------TDHAQIVIDKAVQLFGGDGVRNGMAVESLYREIRALRIYEGASD 370


>gi|167905574|ref|ZP_02492779.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei NCTC
            13177]
          Length = 1291

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|145601203|ref|XP_363106.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145009233|gb|EDJ93944.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 445

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  + SDG + +SG K W  +S  +D FI+ A +    G   +  
Sbjct: 186 LSEPVSGSDAFALATKATETSDG-FKISGSKMWITNSMEADFFIVFANLNPDKGYKGITA 244

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
            + +    G    + + K+G R+++T       VE+   N  G        + G + + +
Sbjct: 245 FIVEKGTKGFSIAKKEKKLGIRASSTCVINFDDVEIPKENLLGERGAGYKYAIGLLNEGR 304

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I   +A M+   +      A +    R   G  + +   M+  +A   ++IAAA AL 
Sbjct: 305 IGI---AAQMTGLALGAWENAARYCYNDRKQFGQFIGEFQGMQHQMAQSYVEIAAARALV 361

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +    +AA A++       +  ++A  V   A+E +GG G++ E    + 
Sbjct: 362 YNAARKKEAGEDFVRDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGLAEKF 414

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +   L+K
Sbjct: 415 FRDSKIGAIYEGTSNIQLNTIAKSLQK 441


>gi|186472522|ref|YP_001859864.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194854|gb|ACC72818.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 384

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D A++ +   +  D  Y ++G K F++ +P +  + ++A+        G + 
Sbjct: 124 LTEPGSGSDAASLRTTALRDGDH-YVINGTKRFITNAPEAGIYTVMARTSPDSKGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVE 310
            F+V    E G+P GL   ++  K+G +   T ++ F N        + G   V  G   
Sbjct: 183 AFIV----EKGTP-GLSLGKIDKKMGQKGAHTCDVIFENCRVPASNMIGGKEGV--GFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + +S + V  AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHISAICVGAAERMLDDALRYAMERKQFGQPIAEFQLVQAMLADSRAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA ++    A   DE    S EA+         K +  +M   V   A++  GG+GY+
Sbjct: 293 IYAARSMVLDAARRRDEKHDVSTEAS-------CCKLFASEMCGRVADRAVQIHGGAGYV 345

Query: 426 EERSIARHYRE 436
            + ++ R YR+
Sbjct: 346 SDYAVERFYRD 356


>gi|298207516|ref|YP_003715695.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus
           HTCC2559]
 gi|83850152|gb|EAP88020.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus
           HTCC2559]
          Length = 392

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   +T+  +   D  Y L+G K W  +SP  D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPGGMTTNFKDNGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F +     +   N+  G       L  
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQDV---KVPKENLLPGKSGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLL 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RL    +E K+ S + + A       K    ++A  +  EA + +GG G   E SI R
Sbjct: 307 AWRLGVLREEGKATSAQISMA-------KRNNVEVAINIAREARQMLGGMGITGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|300770148|ref|ZP_07080027.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762624|gb|EFK59441.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 379

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  +  +  +   D  Y L+G K W  +   +D ++++AQ     G   +
Sbjct: 123 FALSEPEAGSDATSQHTLAEDKGDH-YLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             L+ +    G      +NK+G RS+ T  L FS+             FGF      +  
Sbjct: 182 NVLIVEKGMEGFTIGPKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDG 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G     +I I   +  ++     ++LA    YA+ R   G  + +   ++  +AD+ ++I
Sbjct: 242 G-----RIGIAAQALGIAAGAYELALA----YAKERKTFGKPISEHQAIQFKLADMEMEI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  + A   D  +   + AA A++ A        ++A     EA++  GG GY++
Sbjct: 293 EAARLLIHKAAWLKDNGQPYGKAAAMAKLFA-------SEVAMKTTIEAIQIHGGYGYVK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYHVERLMRDAKITQIYEGT 365


>gi|225628887|ref|ZP_03786921.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254706042|ref|ZP_05167870.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254711660|ref|ZP_05173471.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254712274|ref|ZP_05174085.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715345|ref|ZP_05177156.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256029706|ref|ZP_05443320.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256157859|ref|ZP_05455777.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256253180|ref|ZP_05458716.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167205|ref|ZP_05754016.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261217074|ref|ZP_05931355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261220286|ref|ZP_05934567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261313479|ref|ZP_05952676.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261319284|ref|ZP_05958481.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261319944|ref|ZP_05959141.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261756609|ref|ZP_06000318.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986717|ref|ZP_06099274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265996367|ref|ZP_06108924.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|225616733|gb|EEH13781.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|260918870|gb|EEX85523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260922163|gb|EEX88731.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292634|gb|EEX96130.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261298507|gb|EEY02004.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261302505|gb|EEY06002.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736593|gb|EEY24589.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|262550664|gb|EEZ06825.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264658914|gb|EEZ29175.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 375

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|167462606|ref|ZP_02327695.1| butyryl-CoA dehydrogenase [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322381522|ref|ZP_08055501.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154529|gb|EFX46826.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 592

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +   DG  Y L+G K F+++   +D FI+ A+V+G+    F+V
Sbjct: 147 LTEPASGSDALGAKTTAKLSEDGQHYILNGSKIFITNAGFADIFIVYAKVDGKDFSAFIV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
            + +      G      + K+G + ++T  L F +       LLG+  V  G +    IL
Sbjct: 207 EKEMP-----GFSLGPEEKKMGIKGSSTRPLYFEDCKVPVENLLGE--VGRGHIIAFNIL 259

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +  +   G + ++  ++ YA  R   G  +   P++ + +AD+ +    A +
Sbjct: 260 NIGRFKLGAGCLG--GAKEAIEHSVKYANTRKQFGTEISSFPLIGKKLADMNIRTFVAES 317

Query: 372 LSFRLA------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           + +R +            +S D  K  ++  A   +   I K +  ++   V  EA++  
Sbjct: 318 MVYRTSGLIDHILKDLDHSSPDAGKQSAKGIAEYALECSINKVFASEVLDFVADEAVQIH 377

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G+ +E  + R YR+S  N I  G+
Sbjct: 378 GGYGFTQEYKVERIYRDSRINRIFEGT 404


>gi|25453061|sp|Q9FS87|IVD2_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 2, mitochondrial;
           Short=IVD 2; Flags: Precursor
 gi|10129810|emb|CAC08234.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum]
          Length = 401

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 109/251 (43%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++  G Y L+G+K W  + P +   ++ A+ +       +
Sbjct: 143 LAMSEPDAGSDVVSMKCKADRVEGG-YVLNGNKMWCTNGPTAQTLVVYAKTDVTASSKGI 201

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F N F     +LG +      +     L
Sbjct: 202 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQVGKGVYVLMSGLDL 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A   V  M+  L   + Y ++R   G  + +   ++  +AD+   + ++ +  + 
Sbjct: 262 ERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQSSRSYLYS 321

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A   D     +++ A   + A        + A  V  +A++C+GG+GY+ E    R  R
Sbjct: 322 VARECDSGTINTKDCAGVILSA-------AERATQVALQAIQCLGGNGYVNEYPTGRFLR 374

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 375 DAKLYEIGAGT 385


>gi|53721523|ref|YP_110508.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei K96243]
 gi|254263364|ref|ZP_04954229.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|52211937|emb|CAH37942.1| putative non-ribosomal peptide synthetase [Burkholderia pseudomallei
            K96243]
 gi|254214366|gb|EET03751.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 1291

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|258510174|ref|YP_003183608.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476900|gb|ACV57219.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 19/265 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   T   IG   LTE + G++ AAI +   K  D  Y L+G K +++ +P +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPQAGSNAAAIKTTAVKKGDR-YILNGQKIYITNAPYAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +   G   +   + +    G     ++ K+G   + T ++ F +     + + NV   
Sbjct: 171 VTDPSKGAKGITSFIVERDFPGFRVGHIEKKMGLHGSHTAQIFFED---MEVPEENVLGR 227

Query: 305 -STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G V  +KIL    + + +  +      L +++ +A  R   G  + +Q +++  +A+
Sbjct: 228 EGEGYVNALKILANGRAGLAARCLGSCEYLLDKSLAFAHERIQFGKPIFEQQIIQHYLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL+I       +R+A   D+  +  +EAA       + K +  ++   V  +A++  GG
Sbjct: 288 MALEIELLRTFVYRVAWMTDQKMNVIKEAA-------MLKLYGSEVYNRVADKAVQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+I E  I R YR++    I  G+
Sbjct: 341 LGFIAEYPIERFYRDARITRIYEGT 365


>gi|289580495|ref|YP_003478961.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289530048|gb|ADD04399.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 377

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 46/268 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVE----GR 252
             L+E   G++ A +T++  K+ +G   Y ++G K W  +   +   ++ A+ +      
Sbjct: 120 FALSEPDAGSNPAEMTTEA-KLDEGAGEYVINGKKQWITNGERAGVVVLFAKTDRDDPNT 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED- 311
           V  FLVP+       +G+   + ++K+G R+        S+T   +  D+ +   P E+ 
Sbjct: 179 VTQFLVPK-----DTDGVEVGKKEDKLGLRA--------SDTTTLIFDDVRI---PAENR 222

Query: 312 -MKILIYLDSAIMSVSGMRVSLA-EAI-----------HYARRRHVSGGILIDQPVMKRA 358
             ++   L +A   ++G R+++A +A+            YA  R   G  +I+   +   
Sbjct: 223 LTEVGSGLKAAFSILTGGRIAIASQAVGVAQAALDAATAYANEREQFGQPIIEHQAIGHK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  D+ AA  L+   A        R  E       A + KY+  + A  V  EA++ 
Sbjct: 283 LADMQTDVQAARLLTRDAA--------RKNEDGVDPTAAAMAKYFASEAAVDVANEAVQV 334

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG GY ++  + R+YR++   +I  G+
Sbjct: 335 HGGYGYTKDFDVERYYRDAKITTIYEGT 362


>gi|333022890|ref|ZP_08450954.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332742742|gb|EGJ73183.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA++++  +  D  + L+G K F+S   +    ++    G  G   +   
Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           L D    GL +   ++K+G  +  T       V +      G       ++   +   ++
Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  
Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++ D    ++ +      +  + K +       +   A++  GG GY+ E  I +  
Sbjct: 308 QAADALDRKDPQAPQ------LIAMAKRFATDSGFRIADRALQLHGGYGYLHEYGIEKIV 361

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL GS   M
Sbjct: 362 RDLRVHQILEGSNEIM 377


>gi|254284159|ref|ZP_04959127.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680362|gb|EED36711.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 392

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 34/255 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           GL LTE   GTD+ AI +   +  D  Y ++G K W  +     A  +L + +       
Sbjct: 129 GLALTEPNAGTDLQAIRTTAVRDGDD-YVINGTKTWITNGIQGSAVALLVKTDPNADPRY 187

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD-----L 302
             +  F+ P+        G    +   K+G  +  + EL F +   +   L+G       
Sbjct: 188 KGMSLFIAPK------GEGFTVGKKLKKLGYNAIDSAELVFEDYRLSADHLIGGEEGKGF 241

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             +TG +E    L  ++ A   V     SL  A  YA+ RH  G  + +   ++  + ++
Sbjct: 242 FQATGGLE----LGRINVAARGVGLCDGSLRLATEYAQTRHTMGKPICEHQAIQLKLGEM 297

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A    AA  ++   A+++D  +    EA  A       KY+  + A     E+M   GG 
Sbjct: 298 ATRARAARLMTLDAADAYDSGQRCDMEAGMA-------KYFASEAAVRNSEESMRIHGGY 350

Query: 423 GYIEERSIARHYRES 437
           GY +E  I R+YR+S
Sbjct: 351 GYSKEYEIERYYRDS 365


>gi|118473137|ref|YP_889729.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174424|gb|ABK75320.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 382

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + ++     D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            ++ D    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + +G +  L   + + R R   G  LI +  ++  +A +A  I  A   +  +
Sbjct: 243 RVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHV 302

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                  ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 303 VERQLAGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 356 D--MRILGIGGGTTEILTSL 373


>gi|114764710|ref|ZP_01443895.1| isovaleryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542910|gb|EAU45931.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 387

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  + L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLRAEKKND-RFVLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L + S  G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKSMTGFTTSPHFDKLGMRGSNTAELIFDDVEVPFENILGEEGKGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGQPIGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370


>gi|111022678|ref|YP_705650.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822208|gb|ABG97492.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 50/285 (17%)

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML 246
           KAPM  TS+A     TE   G+D A+I +  +++ DG Y LSG K W  ++  +  +++ 
Sbjct: 125 KAPM--TSLAT----TEPGSGSDAASIVTTAERV-DGGYRLSGQKAWISNAGAAQFYVVF 177

Query: 247 AQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------ 295
           A+ +     G V  F    LLE G+  G+ +     K+G R+    E+ F N F      
Sbjct: 178 AKTDRTQRSGGVSAF----LLEKGA-EGMTFGEPMKKMGQRAIVCREIFFDNVFVPEENR 232

Query: 296 ------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                 GF  L+G  ++S            +     +V   R +   A+ YA+ R   G 
Sbjct: 233 LGEEGQGFYGLMGTFDISR-----------VVLGAAAVGAARAAYEYALDYAKTRKQFGV 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+A  I +A  L    A   D   +       AR +A + K    + 
Sbjct: 282 PIIEHQAVAFRLADMATRIESARLLVHHAARIIDSGGN-------ARGIAAMAKLTASET 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  V   A++ +GG GY  E  + +  R+     I  G+ + M L
Sbjct: 335 AMFVTHAAVQTLGGWGYSREYPVEQWMRDVKLEEIEEGTSDIMKL 379


>gi|23098143|ref|NP_691609.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776368|dbj|BAC12644.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 384

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 17/264 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P+  +   IG   LTE   G++ +A+ +   K  D  Y L+G K ++++   ++ F ++A
Sbjct: 112 PLMASGEKIGAFALTEPEAGSNASALKTSAIKKKDK-YILNGTKHYITNATEAEVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +   + + S  G     ++ K+G + + + E+   +   +   LLG+   
Sbjct: 171 VTDPAKGAKGISSFIVEKSNLGFHVGAVEEKMGLKGSHSAEIILDDCEVSVENLLGE--E 228

Query: 305 STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G V  +KIL    + + +  +   +  L  +  YA  R   G  +ID   +   +A++
Sbjct: 229 GQGYVNALKILTNGRAGLAARNLGSCQKLLDMSTTYAIERQQFGTSIIDHQAVAHMLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A++I A  AL++++A   D  ++  +EAA       + K +  ++   V  +A++  GG 
Sbjct: 289 AVEIEALRALTYKVAWMVDNGENVIKEAA-------MLKLYGSEVYNRVADKAVQVHGGI 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI +  + R+YR++    I  G+
Sbjct: 342 GYISDFPVERYYRDARITRIYEGT 365


>gi|23100122|ref|NP_693588.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778354|dbj|BAC14623.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 388

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 23/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-C 255
           + +TE   G+D+  I +      +G+  Y L+G K F+++    D  I++A+ +  V   
Sbjct: 128 IAMTEPGAGSDLQRIKTTA-NFDEGLNGYVLNGSKTFITNGQHCDFAIVVAKTKVDVKPS 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D   NG    +   KIG  +  T EL F +    LL + ++  G  +   +L
Sbjct: 187 KGISLFIVDAKKNGFTKGKNLEKIGLHACDTSELYFED---ILLDESDILGGVNQGFSVL 243

Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L  A  +V+ M   L + + Y + R + G  L      +  +A++   +   
Sbjct: 244 MNELPRERLIVANCAVASMEGVLTDTVSYVKERELFGTTLDQFQHTQFTLAELQTKV--- 300

Query: 370 TALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                R+  SF DE  +R  E       A + K  C ++   VI   ++  GG GY+ E 
Sbjct: 301 -----RVQRSFADECTTRCIEGNLDTATASMAKLSCTEVQGEVIDRCLQLFGGYGYMLEY 355

Query: 429 SIARHYRESPANSILLGSGNAMVL 452
            IAR Y ++    I  G+   M L
Sbjct: 356 PIARAYADARVQRIYGGTSEVMKL 379


>gi|329912390|ref|ZP_08275738.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545621|gb|EGF30781.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 604

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 54/304 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           L+E + G+ ++ I ++ +  +DG Y L+G+K ++S+   +       ++LA+V G  G  
Sbjct: 164 LSEPQAGSSLSDIVTRAEPQADGTYRLTGNKMWISAGEHELAENIVHLVLAKVPGPDGKL 223

Query: 255 --------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---------- 291
                    F+VP+ L +     G  N +    L +K+G R      L F          
Sbjct: 224 IPGVKGISLFIVPKKLVNADGTSGERNDVVLAGLNHKMGYRGTTNCLLNFGEGKFTPQGK 283

Query: 292 SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           +   G+L+G ++     +  M    +I + L + ++  +G       A+ YAR R     
Sbjct: 284 AGAIGYLVGTVHKGLANMFHMMNEARIGVGLGAVMLGYTGY----LHALDYARNRPQGRA 339

Query: 348 ILIDQPVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYAR- 394
                P M           +R +      +    AL+   +   D+ ++ + EE   A  
Sbjct: 340 PQAKDPAMPQLPIIEHTDVRRMLLAQKSYVEGGLALALYCSKLVDDERTATPEERKRATL 399

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I+ PI K W  +        A++  GG GY  E ++ + YR++  N I  G+     
Sbjct: 400 LLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQG 459

Query: 452 LDVL 455
           LD+L
Sbjct: 460 LDLL 463


>gi|298242627|ref|ZP_06966434.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555681|gb|EFH89545.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 32/277 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252
            GLTE   G+D     ++     DG + ++G K F+++  ++    + +  V G+     
Sbjct: 123 FGLTEAEAGSDSGGTRTRAVLKEDGQWHINGSKVFITNAGTNITGGVTITAVTGQRPDGR 182

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   +VP+    G+P G        K+G +++ T  L F      ++ + N+     +
Sbjct: 183 KEITNLIVPK----GTP-GYVIGNPYKKMGWKASDTRPLSFEEC---MVPEENILGKRGD 234

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K  +  LD+  ++++ + V LA     EA+ YAR R   G  +     ++  +AD+ +
Sbjct: 235 GFKQFMQILDAGRVAIAALSVGLAQACLDEALSYARERKQFGKSISTYQAIQFKLADMDM 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  + ++ A    + K    EA+ A++ A  T       A     +A++  GG G+
Sbjct: 295 EIELARLMYYKAAWLHMQGKPYRREASMAKLFASET-------AKRAADQAVQIHGGYGF 347

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++E  ++R++R    N I  G G + V  +L   E G
Sbjct: 348 MDEYPVSRYWRSVKINEI--GEGTSEVQRMLIAKELG 382


>gi|118465554|ref|YP_881791.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166841|gb|ABK67738.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P I S E             + + + +TE   G+D+A I +   +  D  + ++G K 
Sbjct: 111 WLPGIVSGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKT 156

Query: 234 FLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+SS ++ D  +++ + +   G      L+ +    G    R   K+G     T EL F 
Sbjct: 157 FISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQDTAELAFE 216

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           N               F  L+ +L     P E + I      AI +++G R +  + + Y
Sbjct: 217 NVRVPSANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETWRQTLQY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +      +  +A++  ++        R   +  + +  + EA+ A     
Sbjct: 266 AKDRKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLRAVVDGELTAVEASKA----- 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             K+WC + A  VI   ++  GG GY+ E  +AR Y ++   +I  G+   M
Sbjct: 321 --KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370


>gi|152986519|ref|YP_001348996.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961677|gb|ABR83702.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 384

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G+D A++ +    + DG  Y L+G K F++ +P +  + ++A+ +      G +
Sbjct: 124 LTEPDSGSDAASLKTTA--LRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G+P GL   +   K+G +   T ++ F +       L+G +    G   
Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GIGFKT 235

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK+L   D   + ++ + V +AE     A+ YA  R   G  + +  +++  +AD   +
Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  +    A   DE +    EA+ A++ A        +M   V   A++  GG+GYI
Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345

Query: 426 EERSIARHYRE 436
            +  I R YR+
Sbjct: 346 GDYGIERFYRD 356


>gi|48478261|ref|YP_023967.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48430909|gb|AAT43774.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 372

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 23/254 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           LG+TE   GTD  ++ ++  ++ DG Y ++G K F++ +P +D F+  A+    +  FL+
Sbjct: 117 LGMTEPSAGTDALSMKTRADEM-DGKYRINGSKTFITNAPFADVFLTYARTGDDISAFLI 175

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--- 315
                  S  G    +   K+G R + T E+ F++    ++G   +  G      ++   
Sbjct: 176 L-----ASDAGFSRGKSFKKLGMRGSPTGEIYFND---IIIGSDRIIGGINHGKNVMFSG 227

Query: 316 IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + ++ AI++ + + +S      A+ Y+  R   G  + +  +++  +A +   +  +   
Sbjct: 228 LNMERAILAFNSIGISRRAFDLAMEYSMEREQFGKPIHEFELIQEKLAYMYTKLETSRLF 287

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++    +  + +  S +AA + + A  T  +  +       EA++  GG GYI++  I R
Sbjct: 288 AYHALENVQKDRMNSLDAAASILYASETSEYIAR-------EALQIFGGYGYIKDFEIER 340

Query: 433 HYRESPANSILLGS 446
             R+S   SI  G+
Sbjct: 341 LMRDSILLSIGAGT 354


>gi|237509924|ref|ZP_04522639.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei
            MSHR346]
 gi|235002129|gb|EEP51553.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei
            MSHR346]
          Length = 1291

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|297154172|gb|ADI03884.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 387

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 28/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + LTE  GG+D+ A+ +   + +DG Y +SG K W  +S  S    +L     + G    
Sbjct: 124 MALTEPGGGSDLQAMRTVAHREADG-YVVSGSKTWITNSRRSQLIALLC----KTGPDAT 178

Query: 259 PR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309
           P       LL +  P GL   R   K+G +   + EL F         +LG +    G  
Sbjct: 179 PAHQGISILLAEHGP-GLTVSRDLPKLGYKGVESCELSFDGYRAPADAVLGGVE-GKGFA 236

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + MK L    L  A  ++   R +  +A+ YA+ R   G  +     +   +AD+A  + 
Sbjct: 237 QMMKGLETGRLQVAARALGVGRAAFEDALAYAQERESFGTPIWKHQSIGNYLADMATSLT 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+   A   D  +    EA  A++ A  T       A  +   A+   GG GY  E
Sbjct: 297 AARQLTLYAAREADAGRRVDMEAGMAKLFASET-------AMQIALNAVRIHGGYGYSTE 349

Query: 428 RSIARHYRESPANSILLGSGN 448
             + R++R++P   +++G G 
Sbjct: 350 FDVERYFRDAPL--MIVGEGT 368


>gi|169599849|ref|XP_001793347.1| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15]
 gi|160705334|gb|EAT89481.2| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15]
          Length = 416

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 21/252 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++  T++      G Y LSG K W  +SP++D  ++ A
Sbjct: 145 MAKGELLGCFGLTEPNHGSDPGSMESTAKPHPTKKGYYSLSGSKTWITNSPIADVLLVWA 204

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +++G++  F++ R  +   P  L    +K+K G R++ T  ++  N     + + N+   
Sbjct: 205 KLDGKIRGFVIER--DQCPPGTLETPAIKDKNGLRASLTGMIQLDNC---PVPEANMFPE 259

Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361
            V        L+SA   ++ G   +L + I   R     R+   G  +    ++++ +AD
Sbjct: 260 IVGLKGPFSCLNSARYGIAWGTMGALEDCISRTRQYALDRKQFKGNPIAKYQLVQKKLAD 319

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              D A     + ++    DE K+  E       M  + K   C  A        E  GG
Sbjct: 320 ATTDAAFGILAAVQVGRLKDEGKAAPE-------MISMIKRQNCDRALINARTLQEVFGG 372

Query: 422 SGYIEERSIARH 433
           +   +E  I RH
Sbjct: 373 NAVSDEYGIGRH 384


>gi|226362011|ref|YP_002779789.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240496|dbj|BAH50844.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 35/306 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T    + + PK+ + E   T             + LTE  GG+D+
Sbjct: 93  MGGHTVVAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDL 139

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266
            A+++  +   D +       W  ++  S    +L + + +      G  +V  L+E G 
Sbjct: 140 QAMSTTAKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIV--LVEHGP 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             GL   R   K+G +   T EL F N        L G      G +        +  A 
Sbjct: 198 --GLTVSRDLPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVAC 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D 
Sbjct: 256 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDS 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P   +
Sbjct: 316 GDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL--M 366

Query: 443 LLGSGN 448
           ++G G 
Sbjct: 367 IVGEGT 372


>gi|153009500|ref|YP_001370715.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561388|gb|ABS14886.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 394

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   LL +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE   +  R++       D+P     + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FD+ +   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDDGRMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|62290000|ref|YP_221793.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82699928|ref|YP_414502.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189024241|ref|YP_001935009.1| glutaryl-CoA dehydrogenase [Brucella abortus S19]
 gi|237815509|ref|ZP_04594506.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254689313|ref|ZP_05152567.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254693798|ref|ZP_05155626.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254697447|ref|ZP_05159275.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730344|ref|ZP_05188922.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256257560|ref|ZP_05463096.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260546555|ref|ZP_05822294.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260754828|ref|ZP_05867176.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260758045|ref|ZP_05870393.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260761871|ref|ZP_05874214.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883840|ref|ZP_05895454.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261214078|ref|ZP_05928359.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297248402|ref|ZP_06932120.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62196132|gb|AAX74432.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82616029|emb|CAJ11065.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189019813|gb|ACD72535.1| glutaryl-CoA dehydrogenase [Brucella abortus S19]
 gi|237788807|gb|EEP63018.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260095605|gb|EEW79482.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260668363|gb|EEX55303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260672303|gb|EEX59124.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674936|gb|EEX61757.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260873368|gb|EEX80437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260915685|gb|EEX82546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297175571|gb|EFH34918.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 394

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|325280696|ref|YP_004253238.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324312505|gb|ADY33058.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 379

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD +A   Q   + +G  Y L+G K F++ +  +  +I++A  +   G   
Sbjct: 123 FGLTEPNAGTDASA--QQTMAVKEGEHYVLNGSKIFITNAAYAHVYIVMAMTDKAQGTRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           +   + +    G    + + K+G R +AT EL F N    ++   N+     E  +I + 
Sbjct: 181 ISAFIVERDFPGFSIGKKEKKMGIRGSATCELIFENC---IVPKENLLGKVGEGFRIAMK 237

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   M ++   + +A     E + Y + R   G  +      +  +AD+   I AA  
Sbjct: 238 TLDGGRMGIASQALGIAQGAMDETVKYVKERKQFGRSIGQFQNTQFQLADLQTRIQAARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  + A   D  +  S ++A A++ A  T       A  V  +A++  GG GY  E  + 
Sbjct: 298 LVRKAAWKKDMKQPYSADSAQAKLFAAET-------AMEVTTKAVQFHGGYGYTREYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKITEIYEGT 365


>gi|297158876|gb|ADI08588.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 608

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 52/370 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTRAVRQEDGSWHIEGVKRFITSGEHDLSENIIHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  F+VP+   D      G  NG     +++K+G R + T EL F       G+LLG+
Sbjct: 224 KGLSLFIVPKYDFDWETGELGERNGAYTTNVEHKMGLRVSNTCELTFGADHPAKGWLLGE 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
            +   G  +  KI+ +  +     +++ +      A+ YA+ R V G             
Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALDYAKER-VQGPDLAAFTDKSAPR 340

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYA--RIMAPI 399
             +   P ++R++           +L    A+  D     EA      AA+A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMAQKAYAEGLRSLVLYTASVQDEIQALEAAGEDTSAAHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-----V 454
            K +  + A   +A++++ IGGSGY++E  + ++ R++  +++  G+      D     +
Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAVQGQDYFFRKI 460

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL-ARFLTEKIALASS 513
           +    +  N+  +       + G  G+++            + +GL    LT+  A    
Sbjct: 461 VRDQGQALNVISEEIKKFLAEAG-GGEELTAARDALAKAAADLEGLVGTMLTDLAATQQD 519

Query: 514 AAALYRAGMN 523
            A +Y+ G+N
Sbjct: 520 VATIYKVGLN 529


>gi|260777481|ref|ZP_05886375.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607147|gb|EEX33421.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 367

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 40/283 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + + +S   Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 108 LAMSEPNAGSDVVSMQLKAE-LSGDHYVLNGTKMWITNGPDADVLVVYAKTDPSAASRGI 166

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F++ R  E     G  + +  +K+G R + T EL F+N       +LG++N      +
Sbjct: 167 TAFIIERDFE-----GFSHAQKLDKLGMRGSNTCELVFNNCKVPVENVLGEVN------Q 215

Query: 311 DMKILIY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   ++  +G    M+  L   + Y   R   G  + +  +++  +AD+  
Sbjct: 216 GVKVLMSGLDYERVVLAAGPLGIMQACLDLVVPYVHDRKQFGQSIGEFQLVQAKVADMYT 275

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA A  + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY
Sbjct: 276 RANAARAYVYTVAAACDRGETTRKDAAGAIL-------YSAELATQLALDAIQLLGGNGY 328

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           I E    R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 329 INEFPAGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 365


>gi|119872929|ref|YP_930936.1| butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184]
 gi|119674337|gb|ABL88593.1| Butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184]
          Length = 410

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 21/274 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K        +TE   G+D+A I ++ +K+ +  + ++G K F+SS  ++D FI+LA+
Sbjct: 122 PIAKGEKFGAFAVTEPCCGSDVAGIQTRAEKVGNK-WVINGRKAFISSSDIADYFIVLAR 180

Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
                + ++    +   + +    G   ++  +K+G   +   EL F N     + D N 
Sbjct: 181 TYPPPDKKLRYLGLTFFIVERDTPGFKVEQCYHKMGLHGDHACELVFENV---EVPDENR 237

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
           V    +  +  +   D   + V+   V +A+     A  Y  +R   G  +     ++ +
Sbjct: 238 VGEEGMGFLYAMETFDRTRIGVAAQAVGMAQGAFEKAFQYVHQRQAFGVPIAYFQAIQFS 297

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + ++   I  A  L++  A   DE  +R E       +A + K++  ++A  VI+EA+  
Sbjct: 298 LVEMMAKIFTARLLTYLAAKLADE--NRKE----FTFVASLAKFYATEVAEEVISEAINL 351

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GG G I E  + R  R+     I  G+ N   L
Sbjct: 352 HGGVGVIRETGVERFLRDVKITQIYEGANNIQKL 385


>gi|146307993|ref|YP_001188458.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576194|gb|ABP85726.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 379

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 21/261 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR---- 252
           + + +TE   G+D+A + +      D  + L+G K F+S+  ++D  I+ A+ +      
Sbjct: 122 LAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADLVIVAAKTDPANKHA 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +G FLV R +  G   G   ++LK K+G  S  T EL F++       LLGD       +
Sbjct: 181 MGLFLVERGMA-GFERG---KKLK-KLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYL 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     L +A  +V+G   +L   I Y R R   G  +      +  +A++   I  A
Sbjct: 236 MNMLAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R     ++ K   E AA A++    T    CK    V+ E ++  GG GY+ E  
Sbjct: 296 QVFTDRCVLDHNQKKLTPEVAAEAKL---FTTELLCK----VVDEGVQLHGGWGYMWEYP 348

Query: 430 IARHYRESPANSILLGSGNAM 450
           I + Y  +    I  G+   M
Sbjct: 349 ICKMYANARIQRIFAGTSEIM 369


>gi|76818257|ref|YP_337190.1| polyketide synthase [Burkholderia pseudomallei 1710b]
 gi|76582730|gb|ABA52204.1| polyketide synthase [Burkholderia pseudomallei 1710b]
          Length = 1276

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 740  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 797

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 798  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 856

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 857  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 915

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 916  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 969

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 970  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1002


>gi|71280784|ref|YP_268345.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71146524|gb|AAZ26997.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 389

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 121/254 (47%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D F++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDK-YILNGNKMWITNGPDADVFVIYAKTDTSAGSKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   N+     + +++L+  
Sbjct: 189 TAFIVERDYPGFSRHQKLDKLGMRGSNTCELVFQDC---EVPAENILGAEGKGVRVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  + + +A     + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGSLGIMDACMDLVVPYIHDRKQFGQSIGEFQLVQGKVADMYTQMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++ +A + D  ++  +++A A I+      +  ++A  +  + ++ +GG+GYI E    R
Sbjct: 306 AYMVAQACDRGETTRKDSA-AVIL------YAAELATKMALDTIQLLGGNGYINEFPAGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|167913884|ref|ZP_02500975.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei 112]
 gi|254198940|ref|ZP_04905358.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|169657112|gb|EDS88506.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
          Length = 1295

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 989  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021


>gi|306845810|ref|ZP_07478378.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306273702|gb|EFM55540.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 375

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|169795335|ref|YP_001713128.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii AYE]
 gi|184158797|ref|YP_001847136.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213158679|ref|YP_002319977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482869|ref|YP_002325072.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239502893|ref|ZP_04662203.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|260554448|ref|ZP_05826669.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|169148262|emb|CAM86127.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii AYE]
 gi|183210391|gb|ACC57789.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057839|gb|ACJ42741.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987579|gb|ACJ57878.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260410990|gb|EEX04287.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|322507390|gb|ADX02844.1| Putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           1656-2]
 gi|323518712|gb|ADX93093.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 381

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|120611270|ref|YP_970948.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589734|gb|ABM33174.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 388

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 29/274 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254
           LTE   G+D A++ ++ + + +  Y ++G K F+S   S D  +++A+        G + 
Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYVINGAKAFISGAGSTDVLVLMARTGSPDSGAGGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP         G+ Y + + K+G  S  T  + F +    +  D  +  G  E  KI
Sbjct: 183 AFAVP-----ADAAGIQYGKKEEKMGWNSQPTRTISFDSVR--IPADHLLGAGG-EGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +L  A  Y + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALNAAQQYMQDRKQFGKAIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  RLA S  +A +R      A     + K +       V+ EA++  GG GYI E 
Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFDVVNEALQLHGGYGYIREY 348

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461
            + R  R++  + IL G+   M V+    +L+ G
Sbjct: 349 PLERLLRDARVHQILEGTNEIMRVIIARRMLDGG 382


>gi|254296707|ref|ZP_04964161.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157806688|gb|EDO83858.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
          Length = 1291

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|302343377|ref|YP_003807906.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639990|gb|ADK85312.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 383

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G GLTE   G+D  A  ++   + DG  + ++G K F+++  + A + +  V  R G F 
Sbjct: 122 GFGLTEPNAGSD--AGGARTTAVLDGDSWLINGSKIFITNASTPASLGVT-VMARTGVFP 178

Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             R      L+E+G+P G   + +  K+  R++ T EL F +        L         
Sbjct: 179 DGRPELSCILVENGTP-GFEARPMHGKMMWRASNTSELYFEDCRVPATNILGQRGKGFHQ 237

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           M  L  LD+  +S+  M V  A+     A+ YA++R   G  +    V    +AD+A++I
Sbjct: 238 M--LATLDAGRLSIGAMGVGGAQGAYELALKYAKQREQFGRPIAAFQVNAFKLADMAMEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L ++     D  +S S+ AA A++       +  ++   V  EA++  GG G + 
Sbjct: 296 EAARLLLYKACWQKDNHQSFSKLAAMAKL-------YASEVMGRVATEAVQLHGGYGLMR 348

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R +R+    +I  G+     L +  L+
Sbjct: 349 EYDVERFFRDQKLLTIGEGTSEVQRLVIARLI 380


>gi|284164461|ref|YP_003402740.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284014116|gb|ADB60067.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 381

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           L+E   G+D+ A+ +  +K  D      G  W  +  ++D   + A+ +   G      F
Sbjct: 125 LSEAGAGSDVPAMDTVAEKEGDEYVINGGKLWISNGSVADTVTLFAKTDPDAGNKGITSF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +V R  ED   +G   +  ++K+G++   T EL F          LG+     G V  +K
Sbjct: 185 IV-RPEED---DGFIVEGTEDKLGDKGCPTAELRFDEMRIPESRRLGE--EGEGFVHALK 238

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    +  A   V   R +  EA  YA  R   G  + +   +K  +AD+   I AA  
Sbjct: 239 TLNGGRITIAARGVGIARAAFEEARDYANEREQFGQPIGEFQSIKHKLADMDTKIQAAKM 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  + A+     ++  ++A+ A++       +  +++  V  E ++  GG GY ++ +  
Sbjct: 299 LMHKAADKKIRGENYIKDASQAKL-------YASEVSREVANEGIQIHGGYGYTKDFAAQ 351

Query: 432 RHYRESPANSILLGS 446
           R YR++  N I  G+
Sbjct: 352 RFYRDAKLNEIYEGT 366


>gi|209571446|ref|NP_001129356.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori]
 gi|208609173|dbj|BAG72196.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori]
 gi|209172195|dbj|BAG74561.1| isovaleryl Coenzyme A dehydrogenase [Bombyx mori]
          Length = 416

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 18/263 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+      +   
Sbjct: 155 LAMSEPGSGSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQH 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            +   L+E   P     Q+L +K+G R + T EL F +       LLG  N     +   
Sbjct: 214 GISAFLIEKDYPGFSTAQKL-DKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSG 272

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L  A   V  M+ ++  A  YA  R   G  + +  +++  +AD+   ++A  + 
Sbjct: 273 LDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADMYTTLSACRSY 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D     S++ A   +       +C + A  V  +A++ +GG+GYI +    R
Sbjct: 333 LYNVAKACDNGHVNSKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYPTGR 385

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
             R++    I  G+G + V  +L
Sbjct: 386 ILRDAKLYEI--GAGTSEVRRML 406


>gi|297154353|gb|ADI04065.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           ++E   G+D+ A++++     DG + +SG K W   + ++D + +  +  G     + CF
Sbjct: 128 MSEPEAGSDLGAMSTKAVA-EDGHHVISGTKAWVSHAGVADVYNVYCRTGGSALSGLSCF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LV     D    GL     + K+G RS  T ++ F    G  + D  +       M +  
Sbjct: 187 LV-----DADSEGLRPLAHERKMGVRSLPTAQIAFD---GVRVPDQRMIGRRNRGMLVAA 238

Query: 317 YL-DSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           ++ D   + +S   V LA+A         + R   G  +I    +   +AD+A  IAAA 
Sbjct: 239 HVFDHGRLGISACAVGLAQAALDHAAAYAKERTQFGKPIISFQGLSFLLADMATQIAAAR 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL + +A   D+ K  S EAA  ++ A  T       A  V  +A++ +GG GY ++  +
Sbjct: 299 ALLYSVAALKDQGKPISAEAAKCKLFATDT-------AMRVTTDAVQVLGGYGYTQDFPV 351

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    IL G+
Sbjct: 352 ERWMREAKLLQILEGT 367


>gi|294853739|ref|ZP_06794411.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819394|gb|EFG36394.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 375

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|291226346|ref|XP_002733155.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 433

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 25/229 (10%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           Y L+G K W  + P++D F++ A+ +  G+    +   ++E   P G       +K+G R
Sbjct: 204 YVLNGSKFWITNGPIADVFVVYAKTDLSGQPQHGISTFIIERDFP-GFSTGPKLDKLGMR 262

Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIH 337
            + T EL F N       +LG  N  T    D++  IL+ L         M+ +L  A  
Sbjct: 263 GSPTGELIFENCKVPVENMLGGYNKGTNNDTDIQSNILVPL---------MQAALDVAFP 313

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +M+  +AD+   ++A  +  + +A + DE    +++ A   +  
Sbjct: 314 YLHARKAFGKPIGTYQLMQGKMADMYTRLSACRSYVYGVARACDEGHFNNKDCAGVIL-- 371

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +  + A  V  +A++C+GG+GYI E +  R  R++    I  G+
Sbjct: 372 -----YSAENATQVALDAIQCLGGNGYINEYATGRLLRDAKLYEIGAGT 415


>gi|221209486|ref|ZP_03582467.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221170174|gb|EEE02640.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + M+  F M     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGMAIVFAMTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP         G    + + K+G R++ T  +   N       LLG+    L ++   
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  L +   +++ +AD+A+ I A
Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A       K +  +MA  V ++A++  GG GY+ + 
Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|167773029|ref|ZP_02445082.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM
           17241]
 gi|167664962|gb|EDS09092.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM
           17241]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           PM +  +    GLTE   GTD  A   Q + + +G  Y L+G K F+++   +D +I+ A
Sbjct: 113 PMAQGKLLGAFGLTEPNAGTD--ASGQQTKAVLEGDHYVLNGSKIFITNGGKADIYIIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G    + + K+G R ++T EL F N    ++   N+   
Sbjct: 171 MTDKSKGVKGISAFIVEKDFPGFSIGKKELKMGIRGSSTCELIFENC---IVPKENLLGQ 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +   I +  LD   + ++   + +A     E + Y + R   G  +      +  +AD
Sbjct: 228 EGKGFTIAMTTLDGGRVGIAAQALGIAQGAFDETVKYVKERKQFGRPISAFQNTQFQLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   I AA  L +  A + D  K  S +AA A++ A        ++A  V  + ++  GG
Sbjct: 288 LKTKIEAARLLVYSAAVAKDTKKRFSTDAAMAKLFA-------AEVAMEVTTKCVQLFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY  +  + R  R++    I  G+
Sbjct: 341 YGYTRDYPVERMMRDAKITEIYEGT 365


>gi|229106283|ref|ZP_04236780.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-28]
 gi|228677138|gb|EEL31518.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-28]
          Length = 382

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 39/244 (15%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       NV  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLKNVEIENRFF-----TNVLGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +++ +  + ++       V  AE+       H S  +L   P ++R + +I L++  A  
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PSVRRLVGEIELELMQARV 296

Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             +++A  +DEA+ + S +A  A +     KY     A +++ +AM  +G     E+  +
Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPL 351

Query: 431 ARHY 434
            R+Y
Sbjct: 352 HRYY 355


>gi|224825721|ref|ZP_03698825.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601945|gb|EEG08124.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 25/259 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 127 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGGDADTLVVYAKTDVNAGPKGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMK 313
              + +    G  +    +K+G R         SNT+     D  V    +     E +K
Sbjct: 186 TAFIVEKGFKGFTHGSKLDKLGMRG--------SNTYPIFFDDCEVPAENILGKEGEGVK 237

Query: 314 ILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+     + A+++      M+  +   + Y   R   G  + D  +M+  +AD+ + ++
Sbjct: 238 VLMSGLDFERAVLAAGPLGIMQACMDVVVPYLNDRQQFGQAIGDFQLMQGKLADMYVKLS 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ A  + +  + D    R E     R  A     +  + A  +  +A++C+GG+GYI E
Sbjct: 298 ASRAYVYAVGQALD----RGESGRQTRKDAAGAILYAAENATQMALDAIQCLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGS 446
               R  R++    I  G+
Sbjct: 354 YPTGRLLRDAKLYEIGAGT 372


>gi|126732009|ref|ZP_01747812.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707541|gb|EBA06604.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 39/326 (11%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           I AAR  L +    GH +   + +  ++A  T  +  + W PK+ + E            
Sbjct: 73  IEAARANLASW---GHGIHSGIVAHYILAYGTEEQKAR-WLPKMVTGE------------ 116

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ----V 249
            +   L +TE  GG+D+  + ++   + DG +Y LSG K F+++      I++A      
Sbjct: 117 -LVGALAMTEPSGGSDVQNLKTRA--VRDGNVYRLSGQKTFITNGQHANLIVVAAKTDPS 173

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +G  G  L+  ++E     G    R   KIG  +  T EL F +       LLG      
Sbjct: 174 QGSKGTSLM--VVETDGAAGFTRGRNLEKIGCHAADTSELFFDDVALPPENLLGG-EEGQ 230

Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + MK L    L     +V  M+ ++   + Y + R   GG L      +  +A+ A 
Sbjct: 231 GFYQMMKQLPQERLIIGCGAVGAMKGAMERTVRYCKEREAFGGPLTQFQNTRFKLAECAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             + A A         D   +           A + KYW       V+ E ++  GG GY
Sbjct: 291 KTSVARAF-------LDACMADHLNGTLTVEKAAMAKYWLSDTQGEVLDECLQLHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++E ++A  + ++    I  G+   M
Sbjct: 344 MQEYAVAEMWTDARVQRIYGGTNEIM 369


>gi|260907092|ref|ZP_05915414.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 388

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y L+G K F+S +  S+ ++++A+  G+ G   +  
Sbjct: 132 LTEPNAGSDAAALRTSAREDGDS-YVLNGVKQFISGAGTSETYLVMAR-SGQDGSRGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G R+  T ++   N     +   N+   P +  KI +    
Sbjct: 190 FILEKGMEGLSFGPNEQKMGWRAQPTRQVIMENV---RVPKENLLGEPGQGFKIAMSGLD 246

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+    S+ G + +L +AI Y   R   G  L     ++  +A++   + AA +L +
Sbjct: 247 GGRLNIGACSLGGGQSALEKAIDYMGERQAFGTELSAFQALRFEVAEMQTKLEAARSLLW 306

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A+++D     +       +++ + K         V   A++  GG GY+ E  I +  
Sbjct: 307 RAASAYDSGDPNTS------LLSAMAKLTATDSGFDVANRALQLHGGYGYLTEYGIEKLV 360

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 361 RDLRVHQILEGTNEIM 376


>gi|83593170|ref|YP_426922.1| butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576084|gb|ABC22635.1| Butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  DG Y LSG K F+S    SD ++++A+  G  G   +  
Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDG-YRLSGQKAFISGGGHSDVYVVMART-GEAGAKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314
            + +    GL + + + K+G +S  T  + F         DL V          E  +I 
Sbjct: 182 FVVEAGAPGLSFGKPEAKMGWKSQPTCAVMFD--------DLRVPASHRLGEEGEGFRIA 233

Query: 315 LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD   +     S+ G + +   A+ Y + R   G  + +    +  +AD+A  + AA
Sbjct: 234 MMGLDGGRLNIGACSLGGAKGAFEAALAYVKERRQFGKAIAEFQATQFTLADMATALEAA 293

Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L  + A   D    S +   A A+ +A  T +  C        +A++  GG GY  + 
Sbjct: 294 RLLLHKAAWLLDAGDPSATSFCAMAKRLATDTGFSVCD-------QALQLHGGYGYTSDY 346

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + R  R+   + IL G+   M
Sbjct: 347 PVERLLRDLRVHRILEGTNEIM 368


>gi|332291488|ref|YP_004430097.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169574|gb|AEE18829.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 392

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 39/249 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + + +  + + D  Y L+G K W  +SP  D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPSGMVTNFKDMGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V R +E     G       NK   R++AT EL F         D+ V   P E++     
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQ--------DVKV---PKENLLPNKS 238

Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  
Sbjct: 239 GLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMIT 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  L+ RL    +E ++ S + + A       K    +MA  +  EA + +GG G 
Sbjct: 299 EITKAQLLALRLGQLKNEDRATSAQISMA-------KRNNVEMALKIAREARQILGGMGI 351

Query: 425 IEERSIARH 433
             E SI RH
Sbjct: 352 TGEYSIMRH 360


>gi|305677907|pdb|3OIB|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis, Iodide Soak
 gi|305677908|pdb|3OIB|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis, Iodide Soak
 gi|309320750|pdb|3P4T|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis
 gi|309320751|pdb|3P4T|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis
          Length = 403

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + ++     D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 145 LAITEPGGGSDVGHLRTRADLDGD-HYVINGAKTYITSGVRADYVVTAARTGGPGAGGVS 203

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            ++ D    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 204 LIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAE 263

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + +G +  L   + + R R   G  LI +  ++  +A +A  I  A   +  +
Sbjct: 264 RVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHV 323

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                  ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 324 VERQLAGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 376

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 377 D--MRILGIGGGTTEILTSL 394


>gi|134282938|ref|ZP_01769640.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|134245586|gb|EBA45678.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
          Length = 1293

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 989  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021


>gi|226196451|ref|ZP_03792032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|225931327|gb|EEH27333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
          Length = 1293

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 759  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 817  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 876  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 935  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 989  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021


>gi|161619036|ref|YP_001592923.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260566377|ref|ZP_05836847.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|161335847|gb|ABX62152.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260155895|gb|EEW90975.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 394

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|149277315|ref|ZP_01883457.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Pedobacter sp. BAL39]
 gi|149232192|gb|EDM37569.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Pedobacter sp. BAL39]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 44/265 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255
           L+E   G+D  +  +  +   D  Y L+G K W  +   +  ++++AQ +       +  
Sbjct: 125 LSEPEAGSDATSQQTTAEDKGDH-YLLNGTKNWITNGSTASTYLVIAQTDRSLKHKGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--K 313
           F+V + +E     G      +NK+G R         S+T   +  D+ V   P E+   +
Sbjct: 184 FIVEKGME-----GFTIGPKENKMGIRG--------SDTHSLMFNDVKV---PKENRIGE 227

Query: 314 ILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIAD 361
                  A+ ++ G R+ +A             A+ YAR+R   G  + +   +   +AD
Sbjct: 228 EGFGFKFAMKTLEGGRIGIAAQALGIAAGAYELALDYARQRKSFGKPIAEHQAVAFKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L ++ A   D+ K  +       +   + K +  K+A  V  EA++  GG
Sbjct: 288 MATQIEAARMLVYKAAWLKDQGKPYT-------LAGSMAKLYASKVAMEVTTEAVQVHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+++E  + R  R++    I  G+
Sbjct: 341 YGFVKEYHVERLMRDAKITQIYEGT 365


>gi|118469346|ref|YP_888975.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170633|gb|ABK71529.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 387

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 72/284 (25%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIML 246
           P+  +  A+G  GLTE  GG+D  A T    ++ DG + ++G K F+++  +D    + +
Sbjct: 117 PLLASGKALGAFGLTEAGGGSDAGA-TKTTARLDDGHWVINGSKQFITNSGTDITRLVTV 175

Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             V G        +   LVP   E     G   +   NK+G  ++ T  L F        
Sbjct: 176 TAVTGEKPDGRKEISSILVPVPTE-----GFTAEPAYNKVGWNASDTHPLSFD------- 223

Query: 300 GDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345
            D+ V   P E++           L  LD   ++++ + V  A     E++ YA+ R   
Sbjct: 224 -DVRV---PEENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKERQAF 279

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIM------ 396
           G                   I    A++F++A    EA++ +   AY   A +M      
Sbjct: 280 GAA-----------------IGTYQAIAFKIARM--EARAHAARTAYYDAAALMLAGKPF 320

Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              A + K    + A     +A +  GG G++ E S+ARHYR+S
Sbjct: 321 KKAASVAKLVASEAAMDNARDATQIFGGYGFMNEYSVARHYRDS 364


>gi|33595664|ref|NP_883307.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565743|emb|CAE36287.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 33/276 (11%)

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243
           P     + +   A+   L+E+  G+D  A+ +  ++   G + + G K W  +   S  F
Sbjct: 100 PVLLGGLAREGRAVNFALSERGAGSDAGAVQATAEREGAG-WRIRGEKCWLGNGGHSHHF 158

Query: 244 IMLAQV--EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
           I+ A+   EG+   +  F+V R       +G+     ++K+G R   T  L+        
Sbjct: 159 IVFARTGPEGQRNNISAFVVAR-----EADGVVVDFYEDKMGIRGTTTTNLKLDTWVAED 213

Query: 297 FLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSL---AEAIHYARRRHVSGGILI 350
            L+G+L         +K+    + +   +++     ++L   AEA  +A  R   G  +I
Sbjct: 214 ALVGELG------HGLKLALATLTIGRVVVAAQANGIALCAYAEACDFAVSRETFGRSII 267

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   +   +AD    ++++  + +  A ++D  +  S   A A+++A        +++  
Sbjct: 268 DHQGIGFKLADAMTGLSSSRMMVYEAARAYDAGEDISTLGAMAKLLAS-------EVSHT 320

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V+ +AM+ +GG GY++  +  R YR+     I  G+
Sbjct: 321 VVDDAMQVLGGRGYVKPSAAERCYRDQRITEIYEGT 356


>gi|146278050|ref|YP_001168209.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556291|gb|ABP70904.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
          Length = 385

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 137/304 (45%), Gaps = 35/304 (11%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           + + L  +P     + P++ S E+              +G L ++E   G+D+ ++  + 
Sbjct: 101 NQIRLNGSPEQQARYLPRLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K  +G Y L+G K W  + P +D  ++ A+ +   G   +   L + S  G       +
Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMKGFSTSPHFD 205

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS----- 331
           K+G R + T EL F +     +   NV     + +++L+  LD   + +SG+        
Sbjct: 206 KVGMRGSNTGELIFEDC---EVPFENVLGAEGKGVRVLMSGLDYERVVLSGIGTGILSAC 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L E + Y + R   G  +    +M+  +AD+ + +  A A  + +A + D  +    +AA
Sbjct: 263 LDEVVPYCQSRQQFGQPIGSFQLMQGKLADMYVALNTARAYVYEVARACDAGRVTRADAA 322

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              +       +  + A     +A++ +GG+G++ +  ++R +R+  A  + +G+G + +
Sbjct: 323 GCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRD--AKLMEIGAGTSEI 373

Query: 452 LDVL 455
             +L
Sbjct: 374 RRML 377


>gi|325093887|gb|EGC47197.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 447

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 46/299 (15%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 155 NGSPEQKAKFLPGLISGQKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITN 213

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 214 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 273

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG LN        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 274 PQENMLGALN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGT 327

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----------RSEEAAYARIM 396
            +    +++  +AD+   ++A+ A ++  A   DEA +           R+++ A A + 
Sbjct: 328 PIAHNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEANNSAIRTQDCAGAILY 387

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A      C         +A++ +GG+GYI E    R  R++    I  G+G + +  +L
Sbjct: 388 AAERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 437


>gi|159044299|ref|YP_001533093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
 gi|157912059|gb|ABV93492.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
          Length = 381

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SDA+I++A+  G  G   +  
Sbjct: 124 LTEPGSGSDAAALKTRAERTNEG-YRLTGTKAFISGGGYSDAYIVMART-GEDGPRGISS 181

Query: 261 LL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
           L+ EDG+P GL +  L++K+G R+  T +++  +       LLG+             ++
Sbjct: 182 LIVEDGAP-GLSFGGLEDKMGWRAQPTRQVQLDDCAVPAANLLGEEGAGF-----RYAMM 235

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   ++++   +  A+A     + Y   R   G  +     ++  +AD  +++ AA  
Sbjct: 236 GLDGGRLNIAACSLGAAQAALDATVAYMGERRAFGKPIDQFQALQFRLADAEIELQAARV 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              + A   D+       A  A     + K +  +    V  + ++  GG GY+ +  I 
Sbjct: 296 FLRQAAWKLDQG------APDATTHCAMAKKFVTEAGSRVADQCLQLHGGYGYLADYGIE 349

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 350 KLVRDLRVHQILEGTNEIM 368


>gi|325520839|gb|EGC99836.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F +     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAITDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP         G    + + K+G R++ T  + F N       LLG+    L ++   
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENCAIPEENLLGNRGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  L +   +++ +AD+A+ I A
Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|226308613|ref|YP_002768573.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187730|dbj|BAH35834.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 16/262 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE   G+DIA++ +  ++  DG + LSG K ++S+   +D  ++ A+ +   G   
Sbjct: 126 GFALTEPDAGSDIASMRTVARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 184

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP+    G+P G+ Y   ++K+G RS  T  +   +    L  D  + T      
Sbjct: 185 ITAFVVPK----GTP-GISYSEPQDKMGIRSAPTYTVYLDDV--VLPLDSVIGTEGRGGN 237

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L+ A + V+ M   +A       R + +       P+       + L    A  +
Sbjct: 238 IALTALNRARIDVAAMANGIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLV 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R+  + D A    ++    R  A I+KY   +   +++ + ++  GG+G++ E  I R
Sbjct: 298 ASRV--TADWAADVKDDGQDIRRAASISKYVATEACFSIVDQTVQIHGGAGFMRESEIER 355

Query: 433 HYRESPANSILLGSGNAMVLDV 454
            YR+     I  G+    +L +
Sbjct: 356 LYRDCRILRIFEGTSQIQLLTI 377


>gi|197103854|ref|YP_002129231.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477274|gb|ACG76802.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 39/290 (13%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E                 + +TE   G+D+  + +  +K  D  Y ++G 
Sbjct: 111 RQWLPKMVSGE-------------AITAIAMTEPGTGSDLQGVRTTARKDGDH-YVVNGS 156

Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K ++++   +D  I++A+ +   G   +  +L + +  G    R  +KIG  S  T EL 
Sbjct: 157 KTYITNGQNADLIIVVAKTDPNAGSKGISLILVEATREGFKRGRNLDKIGQNSADTSELF 216

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARR 341
           F +    L   L       E+ K  +YL S         A+   +G + +  EA  + + 
Sbjct: 217 FEDVRVPLANCLG------EEGKGFVYLMSQLPQERLGIAVSGQAGAQRAFDEAAKFTKE 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R   G  + +    +  +A +   + A  A L + +A    E K  + EA+ A++     
Sbjct: 271 RRAFGQAVFEFQNTRFTMAGLKAKLQAGWAHLDWCIARHL-EGKLTAAEASAAKLFHTEL 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  C         A++  GG+GY+ E  IAR +R++    I  G+   M
Sbjct: 330 QWEVCDA-------ALQLHGGAGYMNEYPIARLWRDARVQRIYGGTSEIM 372


>gi|220914672|ref|YP_002489980.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
 gi|219952423|gb|ACL62813.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 362

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 26/277 (9%)

Query: 182 EYDPTNKAPMQKT----SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-S 236
           + DP    P+ +T       I L LTE + G+D+AA+ ++ + ++DG + ++G K F+ +
Sbjct: 93  QADPDWAGPVIRTVQSGERTIALALTEPQAGSDLAALRARAEPVADG-WTITGEKRFICN 151

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              +D  ++ A  E  +G FLV R        GL  + L    G R      L F+    
Sbjct: 152 GTRADCLVVGAVTEAGLGLFLVER-----PQPGLTAEPLAAA-GWRCLPLAALRFAGVPA 205

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+   + +   ++       L+ A+M+++        A+H+AR R V G  L     ++
Sbjct: 206 RLVVAPDRAARVLQRALAQERLNLAVMALASAECVRDAALHHARTRMVRGASLDAMSHIR 265

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +A+IA  IA        LA  F ++ + + EA  +RI                   A+
Sbjct: 266 QRLAEIATRIA--------LARCFVDSTAATAEA--SRIAMAKNAA--VAALEEAARTAV 313

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           + +G +G +    + R  R++P   I +G G   V++
Sbjct: 314 QILGAAGCVAPSVVERTQRDAPL--IAIGGGTTEVMN 348


>gi|218779944|ref|YP_002431262.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761328|gb|ACL03794.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 386

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 137/317 (43%), Gaps = 30/317 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +   +V  A +++L  T    K   P + S +             +++ + +TE + 
Sbjct: 85  AAPVFESNVGPARVISLFGTEEQKKAVIPGVCSGD-------------LSVSVCMTEPQA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ ++ +  ++  DG Y L+G K F++   M+  +++  + EG  G   +  +L +  
Sbjct: 132 GSDLTSLDTNVEE-KDGHYVLNGTKVFITGGGMASHYLVYTRFEGIKGHKGIGAVLVESG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD-----SA 321
             G  + + +  +G R   +  L F N     +   NV     +  K+++  D     +A
Sbjct: 191 AEGFTFGKQEVFLGLRGMPSCALYFDNV---KIPKENVVIKAGDFGKLMLAFDIERCGNA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M +     +  EA  YA  R   G  + +   ++   AD+A+ + AA  L +R A+   
Sbjct: 248 AMCLGTAGGAFEEARRYAMERQAFGRPICEFQGLQFTFADMAMKLDAARLLVYRAASGAG 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      EA+       + K +  +M   V   A++ +GG GY  +  + R  R++ A  
Sbjct: 308 QGLPSIYEAS-------MGKCYANEMVKEVTDAALQILGGYGYSTDYPLERMVRDARAWQ 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           +  GS   + + + ++L
Sbjct: 361 VAGGSLQMLRVTIASVL 377


>gi|62317682|ref|YP_223535.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269665|ref|YP_418956.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022933|ref|YP_001932674.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237817228|ref|ZP_04596220.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254691180|ref|ZP_05154434.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254695516|ref|ZP_05157344.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254698963|ref|ZP_05160791.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699703|ref|ZP_05161531.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254732411|ref|ZP_05190989.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256015230|ref|YP_003105239.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|256256366|ref|ZP_05461902.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260544917|ref|ZP_05820738.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756781|ref|ZP_05869129.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760212|ref|ZP_05872560.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763450|ref|ZP_05875782.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882598|ref|ZP_05894212.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261215906|ref|ZP_05930187.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261750168|ref|ZP_05993877.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|297249726|ref|ZP_06933427.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197875|gb|AAX76174.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82939939|emb|CAJ12957.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021507|gb|ACD74228.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237788041|gb|EEP62257.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|255997890|gb|ACU49577.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260098188|gb|EEW82062.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670530|gb|EEX57470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673871|gb|EEX60692.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676889|gb|EEX63710.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260872126|gb|EEX79195.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917513|gb|EEX84374.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261739921|gb|EEY27847.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|297173595|gb|EFH32959.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 375

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|148558627|ref|YP_001257429.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|148369912|gb|ABQ62784.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
          Length = 375

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|221069364|ref|ZP_03545469.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714387|gb|EED69755.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 387

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 36/262 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---------- 248
             L+E   G+D+AA+  + +   D  Y ++G K W  +  ++D +++  +          
Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAPGSRGL 188

Query: 249 ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
               V+     F V   +E  +P+ L   RLK        A    E    F   +  L+V
Sbjct: 189 SALIVDADTPGFEVAERIEVIAPHPLA--RLKFSSCRVPAAQRVGEAGEGFKVAMRTLDV 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V           A  S+   R ++ EA+  A  R++ GG+L D  + +  +A +A 
Sbjct: 247 FRTSV-----------AAASLGFARRAMDEALQRATSRNMFGGVLADFQLTQAKLAQMAT 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I +A  L++R A   D+ +S + EAA A++ A        + A  VI  A++  GG G 
Sbjct: 296 QIDSAALLTYRAAWLRDQGESVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGV 348

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E+ + R YRE  A  I  G+
Sbjct: 349 VSEQPVERLYREIRALRIYEGA 370


>gi|296270064|ref|YP_003652696.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092851|gb|ADG88803.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 386

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 32/273 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI-MLAQ 248
           M   S+   + LTE  GG+D+ A+ +      DG  Y + G K ++S+    + I +L +
Sbjct: 111 MADGSIRAAMALTEPDGGSDLQAMRTVATLTPDGTAYRVRGVKTWISNARHASVIGLLCK 170

Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            + R       +   LV R       +G    R   K+G R     E+ F +    +  D
Sbjct: 171 TDPRAEPRHKGISVLLVHR------DHGYTVSRKLPKLGYRGVEACEVVFDDVT--VPAD 222

Query: 302 LNVSTGPVED-MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
             +   P     +++  L+   + V+   V +A+A     + YAR+R   G  +     +
Sbjct: 223 AVLGGEPGRGWAQMMRGLEVGRVQVAARAVGVAQAAFDDALAYARQRETFGKPIWQHQSV 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  + AA  L+   A+  D+ K    EA  A++ A        + A  V  +A
Sbjct: 283 GNLLADMATKVHAARLLTLDAAHRIDQGKRADLEAGMAKLFA-------SEAAMQVALDA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +   GG+GY  E  + R++R++P   +++G G 
Sbjct: 336 IRVHGGNGYSREYDVERYFRDAPL--MIVGEGT 366


>gi|302866027|ref|YP_003834664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302568886|gb|ADL45088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 43/299 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    K W P   S +             +   + ++E   G+D+A I +   +  D 
Sbjct: 102 LTTGDQRKRWLPGFCSGD-------------LVTAIAMSEPGAGSDLAGIRTSAVRDGDS 148

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +  L+G K F+++  M+D  +++A+    +G  G  LV  ++E G+P G    R   K+G
Sbjct: 149 L-VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLV--VVESGTP-GFSRGRRLAKVG 204

Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++N T EL F +       L+G  N      ++  P E + I      A+ +V+     
Sbjct: 205 LKANDTAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSI------AVAAVAACEKL 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA  I YAR R   G  +      +  +A++  ++  A          F+  +    +AA
Sbjct: 259 LALTIEYARSREAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAA 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A       K+W  ++   V    ++  GG G++ E  +A+ + +S   +I  G+   M
Sbjct: 319 KA-------KWWTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIM 370


>gi|302534510|ref|ZP_07286852.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443405|gb|EFL15221.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 385

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 41/272 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTSAPSAEDR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F +     D    G    R  +K+G +++ T EL F         D+ V   PVED+
Sbjct: 184 R--FGISLFAVDTKSEGYSIGRKLDKLGLKTSDTAELAFV--------DVKV---PVEDL 230

Query: 313 -----KILIYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
                K   YL   + S    ++    + A A     +++V+   +  +PV      K  
Sbjct: 231 LGEEGKGFYYLGHNLASERWGIAFGAYAQAAAAVRFAQQYVTDRTVFGKPVSHFQNTKFE 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI   ++ 
Sbjct: 291 LAACQAEVDAAQAVADRALEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|227538607|ref|ZP_03968656.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241526|gb|EEI91541.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y L+G K W  +   +D ++++AQ     G   +  
Sbjct: 125 LSEPEAGSDATSQHTLAEDKGDH-YLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGINV 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
           L+ +    G      +NK+G RS+ T  L FS+             FGF      +  G 
Sbjct: 184 LIVEKGMEGFTIGPKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDGG- 242

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               +I I   +  ++     ++LA    YA+ R   G  + +   ++  +AD+ ++I A
Sbjct: 243 ----RIGIAAQALGIAAGAYELALA----YAKERKTFGKPISEHQAIQFKLADMEMEIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A   D  +   + AA A++ A        ++A     EA++  GG GY++E 
Sbjct: 295 ARLLIHKAAWLKDNGQPYGKAAAMAKLFA-------SEVAMKTTIEAIQIHGGYGYVKEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|46199085|ref|YP_004752.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|46196709|gb|AAS81125.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27]
          Length = 381

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D AA+ ++  +  D  Y L+G K W  +   ++  ++ A 
Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 172

Query: 249 VEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           V   +    +V  ++E G+P G    ++  K+G R++ T EL F +              
Sbjct: 173 VNPELRHKGVVALVVERGTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F   +  LN +  PV           A  SV   R +L EA  YA+ R   G  + +  
Sbjct: 232 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEARKYAKERQAFGQPIANFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     
Sbjct: 281 AIQFKLADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY+ E  + +  R+   N I  G+
Sbjct: 334 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 366


>gi|254185414|ref|ZP_04892002.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|184209649|gb|EDU06692.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
          Length = 1289

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+   G + +SG K W  SS  +    + A+     G  +V  
Sbjct: 755  LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             L  G+P GL        +G R     T+ LE +  +    LG         +       
Sbjct: 813  ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQAMNFAR 871

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I A +AL  +L
Sbjct: 872  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 931  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 985  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017


>gi|322818856|gb|EFZ26146.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 30/309 (9%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           VH      IF R  +    A   P   +S      LTE   G+D  A+ ++ +K  D  +
Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++   +D F+++A V+   G     CF+V +       +G+   R  +K+G
Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335
            R+++TVE+ F N     + + NV     +  +I I  L+   + +    V +A+     
Sbjct: 229 LRASSTVEINFENC---EVPEENVIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y  +R      + D   ++   A  A +I AA  + +  A      +S  +EAA A+
Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKKLMGESFVKEAAMAK 345

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +          ++A    ++A+E  GG G+  +  + R YR++   +I  G+    +  +
Sbjct: 346 LFGS-------QVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIGAIYEGTSIIQLQTI 398

Query: 455 LNLLEKGTN 463
             L++K  N
Sbjct: 399 AKLIKKEYN 407


>gi|315925275|ref|ZP_07921487.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621396|gb|EFV01365.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 35/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA----QVEGRVG 254
            GLTE   G+D  A  +   K  D  Y L+G K F+++  ++D + + A    +  G  G
Sbjct: 121 FGLTEPGAGSDPGAGKTVAVKDGDD-YILNGQKCFITNGGIADFYCITALTDKEAPGTHG 179

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPV 309
             +   L+E  +P GL +   ++K+G R         SNT   +L D+     N+  G  
Sbjct: 180 MSIF--LVEKDTP-GLSHGVEEDKMGIR--------LSNTTDVILEDVRVPKENLLGGEG 228

Query: 310 EDMKI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +   I +  LD A     ++S    + ++ EAI Y + R   G  ++    M+  IAD+A
Sbjct: 229 KGFAIAMKTLDQARAWMGVVSTGLAQRAMNEAIAYTKERKQFGRPVLKFQAMQFKIADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I A+  ++       D+    S EAA A+  A  T   C         EA++  GG G
Sbjct: 289 IKIEASRQMNAYALTLMDQGVPFSREAAIAKCFASDTAMECT-------TEAVQMFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI +  + +  R++    I  G+
Sbjct: 342 YIRDYPVEKLMRDAKIFQIFEGT 364


>gi|323528144|ref|YP_004230296.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385146|gb|ADX57236.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++   + DG + L+G+K F+++   +D  I+ A  +   G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGNKQFVTNGARADIAIVFAVTDPDRGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---TVPEANLLGEPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   V +A A       YA  R   G  L D   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQAVGIARAAFDAARVYASERMQFGKALKDHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      +    EA+ A++ A  T    C       + A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRSAGERCLSEASQAKLFASETAEQIC-------SNAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|264678921|ref|YP_003278828.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209434|gb|ACY33532.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 388

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254
           LTE   G+D A++ ++ + + +  Y ++G K F+S   S   ++L    G  G       
Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP         G+ Y + + K+G  S  T  + F N     +   N+     E  KI
Sbjct: 183 AFAVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +L +A  Y + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKAIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  +  RLA S  +A +R  S   A A+  A    +  C        EA++  GG GYI 
Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346

Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           E  + R  R++  + IL G+   M V+    +LE
Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380


>gi|256788970|ref|ZP_05527401.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772858|ref|ZP_06532236.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289703057|gb|EFD70486.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 391

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D A++ ++  + S G + ++G K W     ++D + ++A+   +G  G   F
Sbjct: 133 LSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHGGIADFYTVMARTGEDGPRGITAF 192

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP   E     GL     + K+G + + T ++      G  + D        +   I L
Sbjct: 193 LVPADAE-----GLSAAVPEKKMGLKGSPTAQVHLD---GVRVPDARRLGDEGQGFAIAL 244

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 245 SALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQGLRFMLADMATQIEAGR 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     +++AA A       K  C   A  V  +A++ +GG GY  +   
Sbjct: 305 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTDAVQILGGYGYTADFPA 357

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 358 ERYMREAKVLQIVEGT 373


>gi|163793207|ref|ZP_02187183.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181853|gb|EDP66365.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 410

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 31/287 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D   + ++  K +DG Y +SG K W  +SP++D F++ A
Sbjct: 141 PKLATGEWVGCFGLTEPDHGSDPGGMKTRAVK-ADGGYLVSGAKMWITNSPIADVFVVWA 199

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  +G +  F++ + ++     GL   +++ K   R++ T E+     F     LL ++ 
Sbjct: 200 KTDDGVIRGFILEKGMK-----GLSAPKIEGKFSLRASITGEIVMDGVFVPEENLLPNVK 254

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRA 358
             +GP         L+ A   +S   +  AEA  +A R     R   G  L    ++++ 
Sbjct: 255 GLSGP------FGCLNKARYGISWGALGAAEACWHASRQYTLDRKQFGRPLAANQLIQKK 308

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +I        RL    DE ++  E  +       + K   C  +  +   A + 
Sbjct: 309 LADMQTEITLGLQSCLRLGRLMDEGRAAPEAIS-------LCKRNSCGKSLDIARMARDM 361

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            GG+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 362 HGGNGVSDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 407


>gi|332971447|gb|EGK10401.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 396

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 34/286 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ + +     GLTE   G+D A + +   +  D  Y L+G+K F+++   ++ +++ A 
Sbjct: 129 PLAEGTKLGAYGLTEPGSGSDAAGMRTTAVRDGDA-YILNGNKIFITNGGEAEIYVVFAV 187

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +       V   + +    G    + + K+G RS+ T E+ F         D  +   P
Sbjct: 188 TDPEKKHHGVTAFIVEKETPGFSIGKKEQKLGIRSSPTTEIIFE--------DCRI---P 236

Query: 309 VED--------MKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           VE+         KI ++ LD     ++   V +A+     A  YA+ R   G  +     
Sbjct: 237 VENRLGEEGQGFKIAMMTLDGGRNGIAAQAVGIAQGALDAATAYAKERKQFGKPIGKLQA 296

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+A  I AA  L+++ A         S+   Y +  A + K +    A  V  E
Sbjct: 297 IQFKLADMATQIEAARLLTYQAA------WLESQGLPYGKASA-MAKLYAGDAAMQVTTE 349

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG GY  E  + R  R++    I  G+     + + N L K
Sbjct: 350 AVQVFGGYGYTREYPVERFMRDAKITQIYEGTNEIQRVVIANHLMK 395


>gi|312958955|ref|ZP_07773474.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311286725|gb|EFQ65287.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 378

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTSA--VLDGDEYVINGSKTFITNGYLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L      G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVQADTPGFAKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +      AI ++S    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------AIGALSSAEAALQWTLEYTRERKAFGKAIADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I              D+  +   +       A + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQIGRVF-------IDQCMALHLQGRLDVPTAAMAKYWATDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  IAR + ++    I  G+   M
Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370


>gi|124007696|ref|ZP_01692399.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134]
 gi|123986818|gb|EAY26590.1| acyl-CoA dehydrogenase  1 [Microscilla marina ATCC 23134]
          Length = 406

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 38/270 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           K + PK+ S EY              +G  GLTE   G++ + + S+ +   D  Y L+G
Sbjct: 135 KKYLPKLASGEY--------------LGCFGLTEPNHGSNPSGMESRLEDKGDH-YVLNG 179

Query: 231 HK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  +SP +D  ++ A+  EGR+   +V R +E     G     + +K   R++ T E
Sbjct: 180 AKMWITNSPKADIAVVWAKNDEGRILGVIVERGME-----GFSTPTIHDKWSLRASVTGE 234

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
           L F++     +   NV  G       L  LDSA   +S   + +A      A  YA  R 
Sbjct: 235 LVFNDV---KIPKENVLPGVSGLKGPLNCLDSARYGISWGAIGVAMDCYDTARRYALERK 291

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    ++++ +A++  +I  A  +S+RL    +E K+ + + + A       K  
Sbjct: 292 QFGKPIAGFQLIQKKLAEMLTEITKAQLVSWRLGVLKNEGKATTAQVSLA-------KRN 344

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             ++A     EA + +GG G  +E SI RH
Sbjct: 345 NIEIAMHTAREARQILGGMGITQEYSIMRH 374


>gi|169624459|ref|XP_001805635.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15]
 gi|111056034|gb|EAT77154.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15]
          Length = 449

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 39/289 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   SV  A  +    T    K W P +F  E              +  LG+TE  GG+D
Sbjct: 137 LAGASVIGAPPIIHHGTEEQKKKWLPGLFDWE-------------TSFCLGITEPSGGSD 183

Query: 211 IAAITSQGQKISDGI-YCLSGH-KWFLSSP----MSDAFIMLAQVEGRVGCFLVPRLLED 264
           +A I +   K  DG  Y ++G+ KW    P    M+ A    +   G  G  ++  ++  
Sbjct: 184 VANILTTANKSPDGKSYIINGYKKWITGMPWATHMTTAVRTGSPDSGARGLSVI--VIPT 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY---L 318
            S +GL ++R++N  G ++     +E  N       LLG  N      E  KI++     
Sbjct: 242 NS-SGLTWRRIENS-GQKAGGASFVELDNVSVPVENLLGKEN------EGFKIIMTNFNK 293

Query: 319 DSAIMSVS---GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  IMS+      R  L+E+  YA +RH  G  ++   ++   +A I   + +  A   +
Sbjct: 294 ERFIMSIGCNRKARTCLSESFDYASKRHTFGKPILSNQIIAHKLATIGRYVESHWAWLEQ 353

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           LA    ++ +  ++   A  +A + K    ++      EA +  GG+GY
Sbjct: 354 LAYHIQQSPAGWQDPEIAGQIA-LAKVHGGRITEMANREAQQIFGGAGY 401


>gi|108803226|ref|YP_643163.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108764469|gb|ABG03351.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 385

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +        LTE   G+D  A+ ++ ++  +G Y + G K W  ++  +D  ++ A+
Sbjct: 119 PMARLEKLGAFALTEPEHGSDAVALETRARRRGEG-YVIDGRKRWVGNASFADVILVWAR 177

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             EG VG F+V R    G+P GL  + +  K   RS+   E+E S         L  +  
Sbjct: 178 DDEGEVGAFVVER----GAP-GLSARVMAGKTAVRSSWQAEVELSGVEVPAENRLERARS 232

Query: 308 PVEDMKILIYL--DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +  ++L  +   +A  ++         A+ +AR R   G  L+   ++++ +A +  +
Sbjct: 233 FRDASRVLAAMRYGAAWAALGHAAACYEAALAHARERRQFGRPLVSFQLVQKKLAGMLAE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I +   L  RL+   D+ K           MA + K    + A  V  EA + +GG+G +
Sbjct: 293 ITSMQLLCLRLSRLADQGKMTG-------AMASLAKMNNARKARGVCLEARDILGGNGLL 345

Query: 426 EERSIARH 433
            E  +ARH
Sbjct: 346 LEHHVARH 353


>gi|317147952|ref|XP_001822404.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 437

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 17/302 (5%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK+              K  +   LG+TE   G+D+A I++  ++ 
Sbjct: 133 IARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEPDAGSDVANISTTARRE 179

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D +Y ++G K ++++ +   +   A   G  G   +  L+   +  G+  +R+ N   +
Sbjct: 180 GD-VYVVNGAKKWITNGIWADYCTAAVRTGGPGKGGISLLVIPLAAPGVTRRRMYNSGVH 238

Query: 282 RSNAT-VELE-FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            S +T +EL+        L+G+ N     +        L  A  S+   RV   +A HYA
Sbjct: 239 ASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLACASLRLARVCAEDAFHYA 298

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  LI +  ++  I    L I  A A   +L N  +  K R  +      M  +
Sbjct: 299 TQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIELTKDRPTDDVRIGGMTAL 358

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLL 458
            K    +     + EA + +GG+GY +    AR  + S  A   ++G G+  ++  L L 
Sbjct: 359 LKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLALQ 418

Query: 459 EK 460
           E+
Sbjct: 419 EE 420


>gi|306840636|ref|ZP_07473388.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306289374|gb|EFM60610.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 375

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQIVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|269837230|ref|YP_003319458.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786493|gb|ACZ38636.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 381

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 26/268 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247
           P+ +  +    GLTE + G+D  A  ++   + DG  + ++G K F ++  ++   I+ A
Sbjct: 113 PLAEGKMLGAFGLTEPQAGSDAGA--TRTTAVRDGNEFVINGQKVFTTNGSIAGVIIVTA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +  ++      G+ + + + K+G   + T ++ F +       LLG    
Sbjct: 171 VTDPEAGRRGISNIIVPADAPGVSFGQDQEKMGLHGSVTSQVYFQDCRVPVDNLLGR--- 227

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRA 358
              P E  +  L  LD   + +  M V +A+A       YA  R   G  + D   +   
Sbjct: 228 ---PGEGFRQFLQVLDGGRIGIGAMSVGIAQAALRAARDYALEREQFGQRIADFQAISFM 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  L +R A   D     + EAA A++ A       C        +A++ 
Sbjct: 285 LADMATQLEAARWLVYRAAWLKDRGLPHTTEAAMAKLFASEAAERICH-------KAIQI 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG GY  E  + R+YR+     I  G+
Sbjct: 338 HGGYGYTTEYPVERYYRDVRLTEIGEGT 365


>gi|126663014|ref|ZP_01734012.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126624672|gb|EAZ95362.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 392

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G++ A + +  + + D  Y L+G K W  ++P +D  ++ A
Sbjct: 125 PKLATGEFIGCFGLTEPDYGSNPAGMVTNYKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  EGR+   +V R +E     G       NK   R++AT EL F N       LL + +
Sbjct: 184 KNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKS 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
               P      L  LDSA   ++   +  A   +    R+    I  D+P+      ++ 
Sbjct: 239 GLGAP------LGCLDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKK 292

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  +I  A  L++RL    +E K+ + + + A       K     MA  +  +A + 
Sbjct: 293 LAEMITEITKAQLLTWRLGVLRNEGKATTAQISMA-------KRNNVDMALTIARDARQM 345

Query: 419 IGGSGYIEERSIARH 433
           +GG G   E SI RH
Sbjct: 346 LGGMGITGEYSIMRH 360


>gi|91780345|ref|YP_555552.1| long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693005|gb|ABE36202.1| Long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 126/266 (47%), Gaps = 31/266 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------QVEG 251
           + + +TE   G+D+A + ++ ++  D  + L+G K ++S+ ++   +++A      +  G
Sbjct: 122 LAIAMTEPDAGSDLAGMKTRAEETGD-YWVLNGSKTYISNGLNADVVLVAARTHPTKAHG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF---GFLLGDLNVST 306
            +  FLV R +E        ++R +N  K+G +S  T EL F +       +LG   V  
Sbjct: 181 -LTLFLVERGMEG-------FERGRNLRKMGLKSQDTAELFFHDVKIPKSHVLG--QVHA 230

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M+ L    L +AI +V+  R+++     + R R V G  L      +  +A +  
Sbjct: 231 GFQHLMRGLAEERLLAAIFNVASARLAMHLTCDFVRERKVFGKPLSSFQNTRFKLAALDT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A +   RL    +  +  + +AA A++       +  ++   ++ E ++  GG+GY
Sbjct: 291 EIEVAQSWVDRLVAEHNADQLDAVDAARAKL-------FTSELNGRMVDEGVQQHGGAGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++E  I R Y++   + IL G+   M
Sbjct: 344 MDEYEICRLYQDERIHRILAGTSEIM 369


>gi|326389651|ref|ZP_08211217.1| acyl-CoA dehydrogenase domain-containing protein
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325994366|gb|EGD52792.1| acyl-CoA dehydrogenase domain-containing protein
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K        LTE   GTD AA   Q   + +G  Y L+G K F+++   +D +I+ A
Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAAA--QQTTAVLEGDHYILNGSKIFITNGGKADVYIVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G    +++ K+G R +   EL F +    ++   N+   
Sbjct: 171 MTDKSKGTKGISAFIVEKDFPGFYIGKVEEKMGIRGSRAAELVFEDC---VVPKENLLGK 227

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI ++ LD   + +    + +A+A       Y + R   G  +     ++  IA+
Sbjct: 228 EGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  ++AA  L +  A       S + EAA A++ A  T       A  V  +A++  GG
Sbjct: 288 MATKVSAARHLVYYAAWRKQNNLSYTMEAAMAKLFASET-------AMEVTTKAVQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
            GY ++  + R  R++    I  G+     + +  NLL+
Sbjct: 341 YGYTKDYPVERLMRDAKITEIYEGTSEVQKMVIASNLLK 379


>gi|304310713|ref|YP_003810311.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796446|emb|CBL44654.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 27/288 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K      + ++E   G+D+AAI ++ +K  DG Y ++G K W  +S  +D F +LA 
Sbjct: 113 PALKGEYVASIAVSEPAAGSDVAAIKTRAEK-KDGDYVINGTKMWITNSTQADWFCLLAN 171

Query: 249 V-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             EG         +VPR        G+   +  NK+G RS+ T ++ F N       +L 
Sbjct: 172 TSEGSKHKNKSMIIVPR-----DAKGIEVSKPLNKLGMRSSDTAQVFFDNVH-VPQRNLV 225

Query: 304 VSTGPVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
              G    M+++ + +     A  +  GM   + E I Y R+R   G  LI+   +    
Sbjct: 226 GMEGAGFMMQMMQFQEERMWGAANAYGGMNGLIQETIAYTRQRETFGQPLINNQSIHFRF 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++ A  AL +     +    + ++       +A + K    ++   +    ++  
Sbjct: 286 AELQTEVEALRALIYHTCELYISNGNPTKTLQ----LASMCKLKAGRLVREISDSCLQYW 341

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV------LDVLNLLEKG 461
           GG G++ +   AR  R+    SI  G+   M+      +D+L    KG
Sbjct: 342 GGMGFMWDNVAARSLRDGRLASIGGGADEIMLGIICKTMDILPGKAKG 389


>gi|264679746|ref|YP_003279655.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210261|gb|ACY34359.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 397

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        D+    GP         L+SA   ++   +  AE     A  Y   R   G
Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C 
Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCG 337

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +   A + +GG+G  +E  +ARH
Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364


>gi|254719151|ref|ZP_05180962.1| glutaryl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265984146|ref|ZP_06096881.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306838143|ref|ZP_07470999.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|306841812|ref|ZP_07474495.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|264662738|gb|EEZ32999.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306288093|gb|EFM59487.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306406733|gb|EFM62956.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 394

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|229097606|ref|ZP_04228565.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-29]
 gi|229116605|ref|ZP_04245992.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock1-3]
 gi|228666915|gb|EEL22370.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock1-3]
 gi|228685876|gb|EEL39795.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-29]
          Length = 382

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 39/244 (15%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       NV  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TNVLGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +++ +  + ++       V  AE+       H S  +L   P ++R + +I L++  A  
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PSVRRLVGEIELELMQARV 296

Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             +++A  +DEA+ + S +A  A +     KY     A +++ +AM  +G     E+  +
Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPL 351

Query: 431 ARHY 434
            R+Y
Sbjct: 352 HRYY 355


>gi|23501963|ref|NP_698090.1| glutaryl-CoA dehydrogenase [Brucella suis 1330]
 gi|163843352|ref|YP_001627756.1| glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|225627560|ref|ZP_03785597.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254704378|ref|ZP_05166206.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254706728|ref|ZP_05168556.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254710165|ref|ZP_05171976.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254714164|ref|ZP_05175975.1| glutaryl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254717599|ref|ZP_05179410.1| glutaryl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256031660|ref|ZP_05445274.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256061171|ref|ZP_05451324.1| glutaryl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256369513|ref|YP_003107023.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260168793|ref|ZP_05755604.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261219432|ref|ZP_05933713.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261314191|ref|ZP_05953388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261317720|ref|ZP_05956917.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261321928|ref|ZP_05961125.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261325175|ref|ZP_05964372.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261755051|ref|ZP_05998760.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261758275|ref|ZP_06001984.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265988751|ref|ZP_06101308.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294852332|ref|ZP_06793005.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|23347910|gb|AAN30005.1| glutaryl-CoA dehydrogenase [Brucella suis 1330]
 gi|163674075|gb|ABY38186.1| Glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|225617565|gb|EEH14610.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|255999675|gb|ACU48074.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260924521|gb|EEX91089.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261294618|gb|EEX98114.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261296943|gb|EEY00440.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261301155|gb|EEY04652.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261303217|gb|EEY06714.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261738259|gb|EEY26255.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261744804|gb|EEY32730.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|264660948|gb|EEZ31209.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294820921|gb|EFG37920.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 394

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|239945565|ref|ZP_04697502.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239992032|ref|ZP_04712696.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291449020|ref|ZP_06588410.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291351967|gb|EFE78871.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 404

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 59/311 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDG 224
           TP    +W P+ F  E DP   A            ++E   G+D++A+T++ +  + +D 
Sbjct: 104 TPDQLAEWVPQCFGDEDDPKVAA----------FCVSEPGAGSDVSAMTTRARYDEAADE 153

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + +SG K W  +  +++  +++A V+  +G      F+VP         GL   R   K
Sbjct: 154 -WAISGQKAWITNGGIAEVHVVVASVDPSLGSRGQAAFIVPP-----GTKGLTAGRTVKK 207

Query: 279 IGNRSNATVELEFSNT---FGFLLG-------------DLNVSTGPVEDMKILIYLDSAI 322
           +G R++ T +L   +       LLG             + + + G        +   +  
Sbjct: 208 LGLRASHTADLFLDDVRVPGHCLLGGKERLDARLARAREGSTAKGQAAMATFEVSRPTVA 267

Query: 323 MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA---- 377
               G+ R +   A+ YA  R   G  +I+   +  A+ADI  +I A   L ++ A    
Sbjct: 268 AQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLLIWQAAWMAR 327

Query: 378 --NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +FD  +              ++K    ++A A   +A++ +GG+GY  E  + R YR
Sbjct: 328 NDRTFDAGQG------------SMSKLRAGELAVAATEKAVQILGGAGYSREHPVERMYR 375

Query: 436 ESPANSILLGS 446
           ++   +I  G+
Sbjct: 376 DAKIYTIFEGT 386


>gi|218781749|ref|YP_002433067.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763133|gb|ACL05599.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 37/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-----VEGRVG 254
           + +TE   G+D+  + +  ++  D I  ++G K F+S+ ++   ++LA       +   G
Sbjct: 123 VAMTEPGAGSDVGGLEATAEEDGDEI-VINGVKTFISNGINCDLVVLAARNPEIADKHAG 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302
             L   L+EDG+P G    +  +K+G  S  T EL FSN              GFL+   
Sbjct: 182 VSLY--LVEDGTP-GFTRGKHLDKMGMHSQDTAELFFSNCRIPKENILGQKGHGFLM--- 235

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +E ++    L SAI +V+G   +L  A+ YA+   V G  L     +K  +A+I
Sbjct: 236 -----LMEKLQ-QERLMSAIANVAGAENALKWAVAYAKETMVDGKPLSKSQAVKFKLAEI 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +++        L       K  +        +  ++K+   +M    +A+ ++  G  
Sbjct: 290 ATEVSMNRVFLDHLIEEHIAGKDVT-------ALTMMSKFASSEMMNTQLADIIDIFGEY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G +E   IA+ +R+S   +I  G+   M
Sbjct: 343 GLLESGPIAKGFRDSRITTIFAGTTEIM 370


>gi|83648430|ref|YP_436865.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636473|gb|ABC32440.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 378

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   K  D  Y L+G K F+++   +D  I++A+ + + G    
Sbjct: 124 IAMTEPGAGSDLQGVKTTAVKNGDH-YVLNGSKTFITNGQHADVVIVVAKTDPKAGAKGT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L + S  G    +   K+G ++  T EL F +       LLG  N  +G +  M+ L
Sbjct: 183 SLFLVESSWKGFSKGKNLEKVGMKAQDTSELFFQDVMVPMENLLGAEN--SGFIALMQEL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L   I ++S    +L   I Y + R+  G  L+     +  +A++  ++ A     
Sbjct: 241 PQERLLVGITAISACEAALDLTIKYCKERNAFGKPLMAFQNTRFKLAELKAEVTAGRVFL 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R      + K     AA       + K W   +   V+ E ++  GG GY+ E  IAR 
Sbjct: 301 DRCLELHLDKKLDVPTAA-------MLKQWSTDLQCKVMDECVQLHGGYGYMWEYPIARA 353

Query: 434 YRESPANSILLGSGNAM 450
           + +S    I  G+   M
Sbjct: 354 WADSRVQKIYAGTNEIM 370


>gi|16082509|ref|NP_393775.1| Acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
          Length = 369

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 69/325 (21%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  K+FS       +A M       GL +TE  GG+D+A I +   K
Sbjct: 87  VIALFGNDDQKKKYLSKVFS------GQAKM-------GLAVTEPGGGSDVANIKTTAVK 133

Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGR----VGCFLVPRLLEDGSPNGLCYQ 273
             D  Y L+G K F+++  ++D F++LA+  VE +    +  F+V R       +G    
Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNF-----DGFKSN 187

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMS 324
           ++  K+G R+  T EL   N              P E++          I+ + D +   
Sbjct: 188 KIHGKLGVRATDTAELTLENV-----------KVPAENLVGEPGRGFYYIMTFFDISRAY 236

Query: 325 VSGMRVSLAEAIHYARRRHV----SGGILIDQPV-MKRAIADIALDIAAATALSFRLAN- 378
           V+   + +AE I     R V      G +  QP  ++ AIAD+A  I AA  L++  A+ 
Sbjct: 237 VAAQALGIAEGIL---ERAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASF 293

Query: 379 --SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +F+   +          +  + K +  + A  V  +AME  G  G     +I R +R+
Sbjct: 294 IFNFNPNPA----------VTSMAKAYAAETAVYVSRKAMEITGIDGL--SSNIERSFRD 341

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
           +    I  G+     L +  +L+ G
Sbjct: 342 AKIMEIWEGTSEIEKLVIARMLKVG 366


>gi|325271301|ref|ZP_08137836.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103560|gb|EGC00872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 395

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 37/234 (15%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           +  F+VP+   +  P+G C  R       L +K+G R   +  L F +     G+L+G  
Sbjct: 21  ISLFIVPKYHVN--PDGSCGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQP 78

Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGG 347
           +     +  M    +I + + + ++  +G   SL     YAR+R           H S  
Sbjct: 79  HQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQGRLPDNKDPHSSAV 134

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITK 401
            +I    +KR +      +  A  L    A  FD+ ++ S+E+A         ++ PI K
Sbjct: 135 PIIQHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTGSDESARNEAQELLDLLTPIVK 194

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L
Sbjct: 195 SWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 248


>gi|146339175|ref|YP_001204223.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191981|emb|CAL75986.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 404

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++ +K++DG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEDALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S G+  +  + +H AR+    R   G  L    ++++ +AD+  +IA
Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGRPLAATQLVQKKLADMETEIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   + +  GG+G   E
Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARVSRDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YQVMRH 372


>gi|138520003|gb|AAI35459.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 440

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D A + ++ +   S   Y L+G K W  +SP++D  ++ A  E G+V  F
Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGKVRGF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L+ R        GL   +++ K   R++AT       VE+   N    LL +++   GP 
Sbjct: 239 LIER-----GTKGLSTPKIEGKFSLRASATGMILLEDVEIPEEN----LLPNVSGLGGPF 289

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   +S   +  AE   +  R++    I    P+     +++ +AD+  
Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI        RL    DE K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 344 DITIGLQACLRLGRLKDEEKATPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 397 SDEYHIIRH 405


>gi|89893686|ref|YP_517173.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
 gi|89333134|dbj|BAE82729.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 381

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 34/271 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +A  LG++E + G+D +AI S   + +  +Y L+GHK ++S+     +           C
Sbjct: 117 MAFSLGISEPQAGSDDSAIASTATRRNGKVY-LNGHKTWISNAGEYPY-----------C 164

Query: 256 FLVPRLLEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--- 308
             + R  +  +P+           K  I  ++   V  + S  +     D+ V       
Sbjct: 165 LFLTRDSQAPNPHKAISMWWVDMTKPGIKLQAVGKVGFKMSKFYELYFEDVEVEEKDLVG 224

Query: 309 VEDMKILIYLDS-AIMSVSGMRVSLA-------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           VE    L  + +  I  ++G+  SL        +A+ YA +R   G  + +  ++++ I 
Sbjct: 225 VEGEGFLQLMKNFEIERLAGVAASLGWAQGAFDDAVRYANQRVQFGKPIGNFQLIQKKIT 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ + +    ++ ++       A    E     +I + + KY+  + A  VI +AM+  G
Sbjct: 285 EMQIKLETMRSMLYK-------ACWEKENGLSVQISSALCKYYVARAAQEVIDDAMQIFG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G GY  E  I R +R+  AN I  G+   MV
Sbjct: 338 GIGYTTETRIQRFWRDCRANRIGGGTDEIMV 368


>gi|145222474|ref|YP_001133152.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145214960|gb|ABP44364.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 382

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T++  +  D  + ++G K +++S +   +++ A   G  G   + 
Sbjct: 124 LAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVVTAARTGGPGAAGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            ++ D    G    R  +K+G RS+ T EL ++        D+ V    V   +   +L 
Sbjct: 183 LIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYT--------DVRVPAANVVGAENTGFLQ 234

Query: 320 SAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            A   VS  RV LA              + + R R   G  LI +  ++  +A++A  I 
Sbjct: 235 IAAAFVS-ERVGLAAQAYSSAQRCLDLTVEWCRNRQTFGKPLIARQTVQSTLAEMARRID 293

Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A       +  +LA   D       E  +A+  A     W       V  +A++  GG 
Sbjct: 294 VARVYTRHVVERQLAGDADLIT----EVCFAKNTAVEAGEW-------VANQAVQLFGGM 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY+ E  + R YR+     + +G G   +L  L
Sbjct: 343 GYMTESEVERQYRD--MRILGIGGGTTEILTSL 373


>gi|299533160|ref|ZP_07046544.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718690|gb|EFI59663.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 396

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        D+    GP         L+SA   ++   +  AE     A  Y   R   G
Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C 
Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCG 337

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +   A + +GG+G  +E  +ARH
Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364


>gi|253681483|ref|ZP_04862280.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253561195|gb|EES90647.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A  +Q   + DG  Y L+G K F++ SP+++ F++ A  +   G   
Sbjct: 123 FGLTEPNAGTD--ASGAQTVAVRDGDNYILNGQKCFITNSPLAETFVIFAITDRSKGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G+   ++++K+G R     E+   +       LLG      G    MK 
Sbjct: 181 ISAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGKGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + V+   + LAE     A  Y + R   G  L     +   +AD+ + I  +
Sbjct: 239 ---LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQS 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A   +  +  S  AA A++        C   A  V  EA++  GG GYI++  
Sbjct: 296 RYLLYQAAMDKNNGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITQIYEGT 365


>gi|240277804|gb|EER41312.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 434

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 46/299 (15%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  + + DG Y L+G K W  +
Sbjct: 142 NGSPEQKAKFLPGLISGQKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F + F 
Sbjct: 201 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG LN        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 261 PQENMLGALN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGT 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----------RSEEAAYARIM 396
            +    +++  +AD+   ++A+ A ++  A   DEA +           R+++ A A + 
Sbjct: 315 PIAHNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILY 374

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A      C         +A++ +GG+GYI E    R  R++    I  G+G + +  +L
Sbjct: 375 AAERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424


>gi|84499962|ref|ZP_00998228.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84391896|gb|EAQ04164.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 386

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P+ +   AI    LTE + G+D+A  T   +   D  + L G K W  +  ++D + + A
Sbjct: 115 PLTRKGKAISAFALTEPQSGSDVANSTMTARDDGDA-WVLDGEKTWISNGGIADVYTLFA 173

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +  EG     L   +L   +P     +RL + I     AT  L FS   G  L    +  
Sbjct: 174 RTGEGPGAKGLSAFILPGDTPGLEIAERL-DTIAPHPLAT--LRFS---GARLPKSALIG 227

Query: 307 GPVEDMKILI-YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P +  +I +  LD    +V+       R +L EA      R V G  L D  +++  IA
Sbjct: 228 QPGQGFRIAMSVLDVFRTTVAAAALGFARRALDEATARVMSREVQGKPLADLQMVQAHIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           ++AL + AA  L +R A + D   SR S EAA A++ A          A  VI  A++  
Sbjct: 288 EMALRVDAAALLVYRAAWTKDSGASRVSREAAMAKLFA-------TDEAQKVIDAAVQLH 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448
           GG G     ++ R YRE  A  I  G+ +
Sbjct: 341 GGDGVRSGNTVERLYREIRALRIYEGASD 369


>gi|103488634|ref|YP_618195.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978711|gb|ABF54862.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 384

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 121/298 (40%), Gaps = 53/298 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           K W PK+ S E             V   + +TE   G+D+  + +  +K  DG  Y ++G
Sbjct: 113 KHWLPKMVSGE-------------VITAIAMTEPGTGSDLQGMRTTAKK--DGNHYVING 157

Query: 231 HKWFLSSPMSDAFIML---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K ++++  +   I++      + R     V  +L +   +G    R  +KIG     T 
Sbjct: 158 SKTYITNGQNADLILVCVKTDPDARPAWKGVSIVLVEADRDGFERGRNLDKIGQDEADTS 217

Query: 288 ELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           EL F++               F +L+ +L     P E + I      AI + +  + +  
Sbjct: 218 ELFFNDVRVPITNCLGEEGQGFIYLMSEL-----PQERLSI------AISAQASAQRAFD 266

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAY 392
           + + Y R R   G  ++D    +  +AD+   +    A L + LA    +  +  E AA 
Sbjct: 267 DTVEYTRERKAFGKPILDFQNSRFVLADLKAKLQVGWAHLDWALARHLKKELTPEEGAA- 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   K W  ++   V+ + ++  GG+GY+ E  IAR +R +    I  G+   M
Sbjct: 326 -------AKLWHTELQWEVMDKCLQLFGGAGYMNEYPIARAWRAARVTRIFGGTNEIM 376


>gi|134278577|ref|ZP_01765291.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|134250361|gb|EBA50441.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
          Length = 383

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRTRKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR++   SI  G+   M+
Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370


>gi|262371624|ref|ZP_06064903.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311649|gb|EEY92734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 386

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 115/274 (41%), Gaps = 12/274 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +      + ++E   G+D+AA+ +  +K  D  Y ++G K W  +S  +D F +LA 
Sbjct: 113 PAIRGEYVASIAVSEVHAGSDVAAVKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                       ++      G+ +    NK+G RS  T ++ F N       L+G   + 
Sbjct: 172 TSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVPQRNLVGAEGMG 231

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       + +   +V G+   + + I YA+ R   G  LI+   +    A++  +
Sbjct: 232 FMMQMMQFQEERMWACANAVGGLENVIQQTIDYAKERTTFGQPLINNQYVHFRFAELMTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A  AL+++        ++ +       ++A + K    ++   V    ++  GG+G++
Sbjct: 292 VEALKALTYQACEQHIAGENVT-------MLASMAKLKSGRLTREVADTCLQYWGGNGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 345 WDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|238059128|ref|ZP_04603837.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237880939|gb|EEP69767.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 226

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 7/131 (5%)

Query: 349 LIDQPVMKRAIADIALDIAAATALS---FRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           + D P+ +  +  +A+D AAA  L+   F L     E  +  + AA  R++AP+ K    
Sbjct: 1   MADNPLHRATLGVLAVDTAAAFVLAGHAFALLGRV-EVGADPDAAAELRVVAPLAKLATG 59

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK---GT 462
           ++A A  +E +E  GG+GY+E+  + R  R++    I  G+ N + LDVL  + +   G 
Sbjct: 60  RLAVACASEYVEAFGGAGYVEDTGVPRLLRDAQVLPIWEGTTNVLALDVLRAVSREDAGG 119

Query: 463 NLFEQLFSTLE 473
            L  +L + ++
Sbjct: 120 PLLRRLAAAVD 130


>gi|15790481|ref|NP_280305.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169236217|ref|YP_001689417.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|10580979|gb|AAG19785.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|167727283|emb|CAP14069.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 374

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 26/257 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
             L+E   G++ A +++  ++  D  + L+G K W  +   S   I+ A+++G   ++  
Sbjct: 120 FALSEPDAGSNPAQMSTTARRDGDE-FVLNGKKQWITNGKRSGVVIVFAKIDGDDDKITQ 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVP+       +GL     ++K+G R++ T  L F +     +   N  T     +   
Sbjct: 179 FLVPK-----DADGLTVGPKEDKLGLRASDTTSLLFDDC---RIPASNQLTEAGRGLSAA 230

Query: 316 IY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           ++ L    + ++   V L++A   A   +       DQP+     ++  +AD+   + AA
Sbjct: 231 LHILTGGRIGIASQAVGLSQAALDAALAYADDREQFDQPISEIQTIRHKLADMETQVQAA 290

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             LS   A   D  +     AA A       KY+  + A  V  EA++  GG GY ++  
Sbjct: 291 RLLSRDAARMADAGEDHQTAAAKA-------KYFASEAAVDVTNEAVQIHGGYGYTKDFD 343

Query: 430 IARHYRESPANSILLGS 446
           + R YR+S   +I  G+
Sbjct: 344 VERFYRDSKITTIYEGT 360


>gi|62858803|ref|NP_001016289.1| glutaryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89266838|emb|CAJ83975.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89268079|emb|CAJ82579.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 440

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D A + ++ +   S   Y L+G K W  +SP++D  ++ A  E G+V  F
Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGKVRGF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L+ R        GL   +++ K   R++AT       VE+   N    LL +++   GP 
Sbjct: 239 LIER-----GTKGLSTPKIEGKFSLRASATGMILLEDVEIPEEN----LLPNVSGLGGPF 289

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   +S   +  AE   +  R++    I    P+     +++ +AD+  
Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI        RL    DE K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 344 DITIGLQACLRLGRLKDEEKATPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 397 SDEYHIIRH 405


>gi|331697454|ref|YP_004333693.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952143|gb|AEA25840.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 384

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 44/314 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG +   +V S  +VA  T  +  + + P++ + E   T             + LTE  G
Sbjct: 83  AGAMGGHTVVSKLLVAFGTKEQQDR-YLPRMATGEIRAT-------------MALTEPGG 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRL 261
           G+D+ A+T+  ++  D  Y ++G K W  +S  S    ++ + +        G  ++  L
Sbjct: 129 GSDLQAMTTTARRDGDD-YVVNGAKTWITNSRRSQLIALMCKTDPAAEPKHRGVSIL--L 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL--- 315
           +E G   GL   R   K+G +   + EL F +       +LG      G  + MK L   
Sbjct: 186 VEHGP--GLTVSRDLPKLGYKGVESCELSFDDYRTPASSVLGGTE-GRGFAQMMKGLETG 242

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I + S  + V+  + +  +A+ YA+ R   G  +     +   +AD+A  I AA  L  
Sbjct: 243 RIQVASRALGVA--QAAFDDALAYAQERESFGKPIWQHQSIGNYLADMATKITAARQLIL 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+ FD  +    EA  A++ A  T       A  V  +A+   GG GY  E  + R++
Sbjct: 301 FAADRFDAGQRCDMEAGMAKLFASET-------AMQVALDAVRIHGGYGYSTEFDVERYF 353

Query: 435 RESPANSILLGSGN 448
           R++P   +++G G 
Sbjct: 354 RDAPL--MIVGEGT 365


>gi|311895307|dbj|BAJ27715.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 22/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ AI +      D  Y L+G K F+S+  ++D  +++A+     G   +
Sbjct: 124 IAMTEPDTGSDLQAIRTTAVDAGDH-YLLNGAKTFISNGILADLVVVVARTTAEGGAHGL 182

Query: 259 PRL-LEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
             L +E G+P    ++R +N  KIG  +  T EL F +       LLG+ N   G +  M
Sbjct: 183 SLLAVERGAPG---FERGRNFDKIGQHAQDTAELFFHDVRVPKTDLLGEEN--QGFLYLM 237

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L    L  A+ +++     L E I Y +RR   G  L     ++  IA++A + A   
Sbjct: 238 RNLAQERLAIAVAAIAAAEAVLDETIGYVKRRTAFGRPLARLQHVRFEIAELATECAVTR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A         D         A   + A + K+W  ++        ++  GGSGY+ + ++
Sbjct: 298 AF-------VDRCVREHNRYALTPVDASMAKWWATELQKRAADRCLQLHGGSGYLRDSAV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR + +    +I  G+   M
Sbjct: 351 ARAFTDGRVQTIYGGTTEIM 370


>gi|315502587|ref|YP_004081474.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409206|gb|ADU07323.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 380

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 43/299 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    K W P   S +             +   + ++E   G+D+A I +   +  D 
Sbjct: 102 LTTGDQRKRWLPGFCSGD-------------LVTAIAMSEPGAGSDLAGIRTSAVRDCDS 148

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +  L+G K F+++  M+D  +++A+    +G  G  LV  ++E G+P G    R   K+G
Sbjct: 149 L-VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLV--VVESGTP-GFSRGRRLAKVG 204

Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++N T EL F +       L+G  N      ++  P E + I      A+ +V+     
Sbjct: 205 LKANDTAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSI------AVAAVAACEKL 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA  I YAR R   G  +      +  +A++  ++  A          F+  +    +AA
Sbjct: 259 LALTIEYARSREAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAA 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A       K+W  ++   V    ++  GG G++ E  +A+ + +S   +I  G+   M
Sbjct: 319 KA-------KWWTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIM 370


>gi|149202685|ref|ZP_01879657.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149143967|gb|EDM32001.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 387

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRND-RYVLNGTKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L + +  G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKTMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEEGRGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  + +  +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLAERKQFGQPIGNFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370


>gi|125777102|ref|XP_001359495.1| GA18485 [Drosophila pseudoobscura pseudoobscura]
 gi|54639239|gb|EAL28641.1| GA18485 [Drosophila pseudoobscura pseudoobscura]
          Length = 411

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 18/262 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D +A ++   K+    Y L+G K W  +S  +   ++ A ++  +    +  
Sbjct: 152 LSEPGNGSDASAASTTA-KLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHKGITA 210

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            L      GL   + ++K+G R+++T +L   +     +    V  GP E  KI +  LD
Sbjct: 211 FLTAKDVPGLSVGKKESKMGMRASSTCQLVLDD---VQVPQCQVLGGPGEGFKIAMQSLD 267

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++     +A+A     + Y+++R   G  L    ++++ +AD+A  +  +  L++
Sbjct: 268 CGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTW 327

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D     ++EAA A++ A     +C         +  + +GG GY  +     +Y
Sbjct: 328 RAAWLKDNGLPITKEAAMAKLHASEAATYCAH-------QCTQILGGMGYTTDLPAEMYY 380

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R +    I  G+     + + N
Sbjct: 381 RNARVTEIYEGTSEIQRIVIAN 402


>gi|288922878|ref|ZP_06417041.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345769|gb|EFC80135.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 396

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 26/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---VGCFL 257
           L+E   G+D AA+ ++  +  D  Y ++G K W      +D + ++A+       + CFL
Sbjct: 127 LSEPHAGSDPAAMRTRAVRDGDD-YVINGAKAWTTHGGDADFYTVMARTSDERRGISCFL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G+P GL     ++K+G   + T  + F      +   +       E + I L 
Sbjct: 186 VPA----GTP-GLSADPPEHKMGLTGSNTATMRFDAVRVPVERRIGAEG---EGLSIALA 237

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++ +   LA+     A+ YA+ R   G  +ID   +   +AD+A  + +A A
Sbjct: 238 GLDSGRLGIAAVATGLAQGALDHAVAYAKEREAFGKAIIDHQGLAFLLADMAAAVGSARA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +   A   D     + EA+ A+++A          A  V  +A++ +GG GY  +  + 
Sbjct: 298 TTLAAARLRDLGLPFATEASIAKLVA-------TDNAMKVTTDAVQVLGGYGYTRDFPVE 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R+ RE+    I  G+     + V   L  G
Sbjct: 351 RYMREAKVMQIFEGTNQIQRMVVGRALAAG 380


>gi|254516883|ref|ZP_05128941.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219674388|gb|EED30756.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  Q ++  D  Y L+G K W  + P +D +++ A+ + + G   +
Sbjct: 130 LAMSEANAGSDVVSMKLQARREGDH-YVLNGTKMWITNGPDADVYVIYAKTDAQAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G       +K+G R + T EL F +        L      VE +   +  
Sbjct: 189 TAFIVERDYPGFSRSPKLDKLGMRGSNTCELVFEDCKVPAENILRAEGKGVEILMSGLDY 248

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  ++S   V  M+  + E + Y   R   G  + +  +M+  +AD+  D+ A  +  + 
Sbjct: 249 ERTVLSGGPVGIMQACIDEVLPYLHTRQQFGQAIGEFQLMQGKLADMYADLNACRSYLYT 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  +   ++ A A I+      +  + A  +  +A++ +GG GY  E +  R  R
Sbjct: 309 VAAACDRGEETRQDCA-AVIL------YTAEKATQLALQAIQALGGYGYTNEANAGRLLR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKLYEIGAGT 372


>gi|195152876|ref|XP_002017362.1| GL21568 [Drosophila persimilis]
 gi|194112419|gb|EDW34462.1| GL21568 [Drosophila persimilis]
          Length = 413

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 18/262 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D +A ++   K+    Y L+G K W  +S  +   ++ A ++  +    +  
Sbjct: 154 LSEPGNGSDASAASTTA-KLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHQGITA 212

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            L      GL   + ++K+G R+++T +L   +     +    V  GP E  KI +  LD
Sbjct: 213 FLTAKDVPGLSVGKKESKMGMRASSTCQLVLDD---VQVPQCQVLGGPGEGFKIAMQSLD 269

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++     +A+A     + Y+++R   G  L    ++++ +AD+A  +  +  L++
Sbjct: 270 CGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTW 329

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D     ++EAA A++ A     +C         +  + +GG GY  +     +Y
Sbjct: 330 RAAWLKDNGLPITKEAAMAKLHASEAATYCAH-------QCTQILGGMGYTTDLPAEMYY 382

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R +    I  G+     + + N
Sbjct: 383 RNARVTEIYEGTSEIQRIVIAN 404


>gi|307545521|ref|YP_003898000.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581]
 gi|307217545|emb|CBV42815.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 16/253 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEPGAGSDVVSMKLKAEKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDPDAGSKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG++N   G    M  L
Sbjct: 189 TAFIIEKGFAGFSTAQKLDKLGMRGSNTCELVFEDCEVPEENVLGEVN--KGARVLMSGL 246

Query: 316 IYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  + + +  +  M+ ++   + Y   R   G  + +  +++  +AD+   + A  A  
Sbjct: 247 DFERTVLAAGPIGIMQAAMDVVVPYLHERKQFGQSIGEFQLVQGKVADMYTTLNACRAYL 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + D  ++  ++AA   +       +C + A  +  +A++ +GG+GYI E    R 
Sbjct: 307 YAVAGACDRGRTSRKDAAGVIL-------YCAEKATQMALDAIQLLGGNGYINEYPTGRL 359

Query: 434 YRESPANSILLGS 446
            R++    I  G+
Sbjct: 360 LRDAKLYEIGAGT 372


>gi|24215339|ref|NP_712820.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24196446|gb|AAN49838.1|AE011431_2 acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 140/341 (41%), Gaps = 72/341 (21%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     M    +   + LTE   G+D+  + ++  K  +GI+ L+G K F++     
Sbjct: 171 EYVP----KMANGEIFGAMALTEPNYGSDLPNLQTKAIKDENGIWKLTGTKRFITHGCGF 226

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKN----------KIGNRSNATV 287
           A I            ++  L   G+P     GL +  +K+          K+G   + T 
Sbjct: 227 ANI----------PAVILTLARTGTPTSGARGLSFFLVKSSDVFIAGIEKKMGLHCSPTC 276

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLA-----EAIHY 338
           E+ + NT G L+G+        E   ++ Y    ++ A +S++   + +A     EA  Y
Sbjct: 277 EVVYENTPGILIGE--------EGYGLVRYSMAMMNGARLSIAAQAMGIATAAYMEAKKY 328

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--------- 389
           A  R   G  + + P + + ++ +  +IA   A+    + S D    +SE          
Sbjct: 329 ASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKSERMRENGIEER 388

Query: 390 -----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                         A +  P++KY+  ++A  +  +A++  GG+G+  +  ++R YR+  
Sbjct: 389 EIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYDYDVSRIYRDVR 448

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472
             +I  G+    V+  +  +  G +        FE+ FS +
Sbjct: 449 ITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKI 489


>gi|307295297|ref|ZP_07575136.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878800|gb|EFN10019.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 389

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 34/279 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----VEGRV 253
           + + ++E   G+D+  + +   K  D  Y ++G K F+S+    + I++A     V G  
Sbjct: 129 LAVAMSEPAAGSDLQGMRTTAVKDGDE-YIINGQKTFISNGAHASLIIVAAKTDPVAGGR 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPV 309
           G  L    +E     G    RL +K+G     T EL FS        D+ V      G V
Sbjct: 188 GISLFG--VETDKVEGFTRGRLLDKMGQEGRDTAELFFS--------DMRVPAENLLGGV 237

Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E     + ++         A  +++ M  +L   + Y   R   G  ++D    +  +A+
Sbjct: 238 EGAGFAMLMEKLPQERLVIAWQAMAMMETALNLTVEYVSERKAFGKAVMDFQNTQFKLAE 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                  AT     L +  ++  + + +AA     A + KYW  +    VI E ++  GG
Sbjct: 298 AK---TLATVAKVFLNHCTEQLLAGTLDAA----TASMAKYWITEAQAKVIDECLQLFGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GY+ E  IA  Y+++ A  I  G+   M L +   L++
Sbjct: 351 YGYMNEYPIAEMYKDARAYRIYGGANEIMKLLIARSLKQ 389


>gi|289449889|ref|YP_003474912.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184436|gb|ADC90861.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 37/304 (12%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
            P + S   D   K   P+      +   LTE   G+D  ++T+    + DG  Y L+G 
Sbjct: 95  GPLLISGTKDQIQKYLLPIASGEKKVCFALTEPGAGSDPNSMTTSA--VLDGDHYVLNGR 152

Query: 232 KWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F++ +P++D  ++ A+ +   G   +   + D    G+   + ++K+G    AT ++ 
Sbjct: 153 KCFITQAPLADYAVVYARTDATKGVKGITAFVVDMKAPGVTCGKPEDKMGIIGCATSDII 212

Query: 291 FSNTFGFLLGDLNVSTGPVED---------MKILIYLDSAIMSVSGMRVSLAE-----AI 336
           F         D+ V   PVED         +  +  LD   + V+   + +A      +I
Sbjct: 213 FE--------DVKV---PVEDRLGAEGMGFINAMKTLDVGRLGVAAQSIGVAGGALELSI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +     +   +A++A  + AA  L++  A    E K R+++ A  R  
Sbjct: 262 QYAKERKQFGKPIAKFQAISFMLAEMATKLEAARQLTYHAA----ELKDRNDKNA-GRYC 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + + K +  ++   + A+A++  GG G+I++  + R YR+    +I  G+     + + N
Sbjct: 317 S-MAKLFASEVCNEICAKAVQIHGGYGFIKDYKVERMYRDCRVFTIYEGTSQVQQIVISN 375

Query: 457 LLEK 460
            L K
Sbjct: 376 SLLK 379


>gi|254701832|ref|ZP_05163660.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261752390|ref|ZP_05996099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261742143|gb|EEY30069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 394

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|254281716|ref|ZP_04956684.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
 gi|219677919|gb|EED34268.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
          Length = 392

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 52/271 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
             L+E   G+D+AA+  + +   DG + L+G K W  ++ ++D + + A+    +EG  G
Sbjct: 132 FALSEPNAGSDVAAMECRAEAEGDG-FILNGTKTWISNAGIADFYTVFARTDPTLEGAKG 190

Query: 255 --CFLVP---------RLLEDGSPNGL-------CYQRLKNKIGNRSNATVELEFSNTFG 296
             CF+VP           ++  +P+ L       CY   K  +G +            F 
Sbjct: 191 ISCFIVPADTPGFEVSERIDLVAPHPLGTLQFTDCYLPAKQLVGEQGRG---------FA 241

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +  L+V    V           A  ++   R +L   + +  +R + GG L+D P+++
Sbjct: 242 IAMATLDVFRSTV-----------AAAALGMARCALDATLDHIGQRDIFGGKLVDLPLVQ 290

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             + D+AL I ++  L +R A + D    R + EAA A++ A        + A  VI  A
Sbjct: 291 AKVGDMALAIDSSALLVYRAAWTKDCVAERVTREAAMAKLAA-------TESAQQVIDSA 343

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG G  +   +   YR+  A  I  G+
Sbjct: 344 VQLHGGKGVTKGNIVESLYRDIRALRIYEGA 374


>gi|316935219|ref|YP_004110201.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602933|gb|ADU45468.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 390

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G+K W  + P+++  ++ A+ +   G    
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPIAETLVVYAKTDPAAG---- 185

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
           PR     L+E G       Q+L +K+G R + T EL F        N  G +   +NV  
Sbjct: 186 PRGMTAFLIEKGFKGFSTAQKL-DKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLM 244

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + ++    A   V  M+  +   + Y   R   G  +    +++  +AD+ + +
Sbjct: 245 SGLDYERAVL----AAGPVGIMQACMDVVMPYVHERKQFGEPIGTFQLVQGKVADMYVTM 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI 
Sbjct: 301 NASRAYVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYIN 353

Query: 427 ERSIARHYRESPANSILLGS 446
           +    R  R++    I  G+
Sbjct: 354 DYPTGRLLRDAKLYEIGAGT 373


>gi|302560528|ref|ZP_07312870.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302478146|gb|EFL41239.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 386

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-K 220
           V L  T    ++W P++ S E             +    GLTE  GG+D  A  +  +  
Sbjct: 98  VHLFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            S   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 145 ESTDEWVINGGKCFITNSGTDITGLVTVTAVTGRKPDGKPLISAIIVP----SGTP-GFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+           + L  LD   ++++ +
Sbjct: 200 VAAPYSKVGWNASDTRELSFQDVRVPAANLLGEQGRGY-----AQFLRILDEGRIAIAAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD  +++ A TA   RLA  + +A
Sbjct: 255 GTGLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDA 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     +A +  GG G++ E  +AR +R+S    + 
Sbjct: 308 ASRLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILE 365

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 366 IGEGTSEVQRMLIARELG 383


>gi|297194266|ref|ZP_06911664.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720558|gb|EDY64466.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 45/274 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251
           L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTSAPREDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  L      D    G    R  +K+G R++ T EL F         D+ V   PVED
Sbjct: 184 RFGISL---FAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229

Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356
           +     K   YL   + S       G       A+ +A++ +V+   +  +PV      K
Sbjct: 230 LLGEENKGFYYLGQNLPSERWGIAFGAYAQAKAAVRFAQQ-YVTDRTVFGKPVASFQNTK 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A    ++ AA A++ R   + D  +  + EAA A++       +C ++A  VI   +
Sbjct: 289 FELAACQAEVDAAEAVADRALEALDAGELTAAEAASAKL-------FCTEVAHRVIDRCL 341

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375


>gi|111020337|ref|YP_703309.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819867|gb|ABG95151.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 39/308 (12%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T    + + P++ + E   T             + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLLSLYGTEEQKRQYLPQMATGEIRAT-------------MALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRLLEDG 265
            A+++  +   D +  +SG K ++S+      I L             G  +V  L+E G
Sbjct: 133 QAMSTNAKTDGDDL-VISGSKTWISNARRSGLIALLCKTDPGASPKHKGISIV--LVEHG 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDS 320
              GL   R   K+G +   T EL F N   +   +LG      G  + MK L    +  
Sbjct: 190 P--GLTVSRDLPKLGYKGVETCELSFDNYRISSDAVLGG-TPGKGFAQMMKGLETGRIQV 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +
Sbjct: 247 ACRALGVATAALEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQY 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P  
Sbjct: 307 DSGDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL- 358

Query: 441 SILLGSGN 448
            +++G G 
Sbjct: 359 -MIVGEGT 365


>gi|163848214|ref|YP_001636258.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222526122|ref|YP_002570593.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163669503|gb|ABY35869.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450001|gb|ACM54267.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 417

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   GTD AA+ +  ++  +  Y L+G K W   + ++D F++ A+ +   G   +  
Sbjct: 140 LTEPNSGTDAAAMQATARRDGED-YILNGEKIWISLADLADNFLVFAKTDPGAGPRGITA 198

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314
            + + S  G+    +  K+G R+         NT G +  D+ V          E  KI 
Sbjct: 199 FIVERSMPGVSSYPIHGKLGVRA--------GNTGGVVFNDVRVPRSHRLGEEGEGFKIA 250

Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD+   +V+      ++ SL  +I YAR R   G  + +  ++KR I+ +   +  +
Sbjct: 251 MAALDNGRYTVAAGATGLIQASLEASIRYARERQTFGVPIAEHQLVKRMISHMVRKLDTS 310

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R     ++    + E   A+  A ++ +           +A++  G  GY +E  
Sbjct: 311 RLLVYRAGWMKNKGIRNTRETTLAKWHATVSSFEAAD-------DAIQIHGAYGYADEYP 363

Query: 430 IARHYRESPANSILLGS 446
           + R+ R +    I  G+
Sbjct: 364 VERYLRNARGAIIYEGT 380


>gi|332851736|ref|ZP_08433661.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332865889|ref|ZP_08436669.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332729743|gb|EGJ61078.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332734939|gb|EGJ66025.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 430

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAA 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +E K    EA  ARI+       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEEGKPFHREAYLARIL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|257067267|ref|YP_003153522.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
 gi|256558085|gb|ACU83932.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
          Length = 418

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 51/265 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---QVEGRV 253
            GLTE   G+D A  T    ++ DG + + G K F++   +P++    + A   Q +GR 
Sbjct: 149 FGLTEAEAGSD-AGGTRTTARLEDGQWVIDGTKQFITNSGTPITSLVTITAVTGQRQGRD 207

Query: 254 G-------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           G         +VP      +P G       +K+G  +        S+T   LL  + V  
Sbjct: 208 GRSSPELSSIIVP----TDTP-GFTVLPGYDKVGWHT--------SDTHPLLLEGVRV-- 252

Query: 307 GPVEDM---------KILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
            P E++           L  LD      A + V   +  L +A+ YAR R V G  L + 
Sbjct: 253 -PEENLLGERGRGFANFLAILDQGRVALAALCVGAAQGCLEQAVRYARERVVFGRALGEN 311

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +A +   +A+A AL    A+  D     S EA+ A+++         + A A  
Sbjct: 312 QHIAFTLARMQARVASARALMHEAAHRLDAGMPFSREASLAKLVG-------SEAAVANA 364

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
            +A +  GG+G++ E  +ARHYR+S
Sbjct: 365 RDACQIWGGNGFLNENVVARHYRDS 389


>gi|45657228|ref|YP_001314.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45600466|gb|AAS69951.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 586

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 140/341 (41%), Gaps = 72/341 (21%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     M    +   + LTE   G+D+  + ++  K  +GI+ L+G K F++     
Sbjct: 171 EYVP----KMANGEIFGAMALTEPNYGSDLPNLQTKAIKDENGIWKLTGTKRFITHGCGF 226

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKN----------KIGNRSNATV 287
           A I            ++  L   G+P     GL +  +K+          K+G   + T 
Sbjct: 227 ANI----------PAVILTLARTGTPTSGARGLSFFLVKSSDVFIAGIEKKMGLHCSPTC 276

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLA-----EAIHY 338
           E+ + NT G L+G+        E   ++ Y    ++ A +S++   + +A     EA  Y
Sbjct: 277 EVVYENTPGILIGE--------EGYGLVRYSMAMMNGARLSIAAQAMGIATAAYMEAKKY 328

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--------- 389
           A  R   G  + + P + + ++ +  +IA   A+    + S D    +SE          
Sbjct: 329 ASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKSERMRENGIEER 388

Query: 390 -----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                         A +  P++KY+  ++A  +  +A++  GG+G+  +  ++R YR+  
Sbjct: 389 EIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYDYDVSRIYRDVR 448

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472
             +I  G+    V+  +  +  G +        FE+ FS +
Sbjct: 449 ITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKI 489


>gi|254241359|ref|ZP_04934681.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192]
 gi|126194737|gb|EAZ58800.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192]
          Length = 393

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 15/255 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGNKMWITNGPDCDILVVYAKTDLAAGAKGM 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              +LE  +P     Q+L +K+G R + T EL F +     +   NV     E +K+L+ 
Sbjct: 188 TAFILETNTPGFSVAQKL-DKLGMRGSHTGELVFQDV---EVPAENVLGQVGEGVKVLMS 243

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD     +SG  + L +A     + Y   R   G  + +  +++  +AD+   + A+ A
Sbjct: 244 GLDYERAVLSGGPLGLMQAAMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQASRA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +    D A+         +  A +  Y   + A  +  EA++ +GG+GYI E ++ 
Sbjct: 304 YLYSVGKHLD-AQGTDHVRQVRKDCAGVILY-AAEKATWLAGEAIQILGGNGYINEFAVG 361

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 362 RLWRDAKLYEIGAGT 376


>gi|301630321|ref|XP_002944270.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 398

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K++ G Y L G K W  +
Sbjct: 114 FGTEAQKQKYLPGLASGALIGCFGLTEPDHGSDPGSMAARATKVAGG-YRLKGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 173 SPVADVFVVWAKEVSEGGAVGPIRGFVLEKGW-KGLAAPAIHGKVGLRTSITGEIVMDDV 231

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        +++   GP         L+SA   ++   +  AE     A  Y   R   G
Sbjct: 232 FVPEENAFPEVHGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTARQYTLERQQFG 285

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +IA     + R     DE  +  E  +       + K   C 
Sbjct: 286 RPLAANQLVQKKLADMQTEIALGLQAALRFGRMKDEGIAAVEGTS-------LIKRNNCG 338

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            A  +   A + +GG+G  +E  +ARH
Sbjct: 339 KALDIARLARDMLGGNGISDEFGVARH 365


>gi|288960856|ref|YP_003451196.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913164|dbj|BAI74652.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 121/264 (45%), Gaps = 27/264 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGR-- 252
           + + +TE   G+D+A++ ++ +   D  + L+G K ++S+ + +DA ++ A+   + R  
Sbjct: 124 LAVAMTEPGAGSDLASMRTRAEDRGDH-WLLNGSKTYISNGLLADAVVVAARTVPDSRHG 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G F+V R +E  S  G  +     K+G  +  T EL F N     +   NV   P    
Sbjct: 183 IGLFIVERGMEGFSRGGRFH-----KMGLHAQDTAELFFDNV---RVPKANVLGDPTRGF 234

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +L +      L +A+ S++  +V+    + Y + RH  G  +      +  +A++   +
Sbjct: 235 HLLAHGLAEERLIAAVGSIAHAQVAFDLTLDYVKERHAFGRPIGTFQNSRFKLAEMRAQL 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     +     +  +   E AA A+++         ++   V  + ++  GG+GY+E
Sbjct: 295 DAAQTFVDQCVLEHNAGRLTGETAAAAKLI-------TSELEGRVADDCVQLHGGAGYME 347

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  I+R Y ++    I  GS   M
Sbjct: 348 EYRISRIYTDARITRIFAGSSEIM 371


>gi|126736656|ref|ZP_01752395.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126713771|gb|EBA10643.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G       +K+G R + T EL F +    F  +LG+        + +++L
Sbjct: 187 TAFLIEKEMTGFSTSPHFDKLGMRGSNTAELVFDDVQVPFDNVLGEEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   L E + Y   R   G  + +  +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEVMPYISTRKQFGEPIGNFQLMQGKIADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425
            A  + +A + D      ++AA            CC    + A     +A++ +GG+G++
Sbjct: 301 RAYVYEVAKACDRGTVTRQDAAA-----------CCLYASEEAMKQAHQAVQAMGGAGFL 349

Query: 426 EERSIARHYRESPANSILLGS 446
            +  +AR +R++    I  G+
Sbjct: 350 NDAPVARIFRDAKLMEIGAGT 370


>gi|85374667|ref|YP_458729.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter
           litoralis HTCC2594]
 gi|84787750|gb|ABC63932.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter
           litoralis HTCC2594]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 26/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D A + +  +K  DG Y +SG K W  +
Sbjct: 112 FGSEEQKRKYLPGLASGELIGCFGLTEPDAGSDPAGMKTVAKKNGDG-YIISGSKTWISN 170

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT---VELEFSN 293
           SP +D F++ A+ E   G  +   +LE G  +GL   +++ KI  R++ T   V  E   
Sbjct: 171 SPFADVFVVWAKSE-EHGGGIRGFVLEKGM-DGLSAPKIEGKISLRASTTGMIVMDEVKV 228

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGI 348
               LL D+    GP         L+ A   +S   +  AE  +H AR+    R   G  
Sbjct: 229 GADALLPDVQGLKGPFS------CLNRARYGISWGSMGAAEFCMHAARQYGLDRQQFGVP 282

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L  + + +  ++++  +IA     S R+    DE K       +A  M  I K      A
Sbjct: 283 LASKQLYQLKLSNMMSEIALGLQASLRVGRLMDEGK-------FAPEMISIVKRNNVGKA 335

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A +  GG+G  EE  + RH
Sbjct: 336 LDIARAARDMHGGNGISEEYQVIRH 360


>gi|317126242|ref|YP_004100354.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590330|gb|ADU49627.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 34/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
            TE   G+D A I +   +  D  + ++G K F+S    +D  I+ A      G   V  
Sbjct: 123 FTEPDAGSDFARIKTSAVRDGDE-WVINGRKTFISHVDRADFLILFASTNPGAGSRGVTC 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVSTGP 308
            L D    G    R    +G+ +    EL F N              GF + D  ++ G 
Sbjct: 182 FLVDKDTPGFEVSRPIPTMGD-AWTPYELTFENCRVPHENVLGEVDKGFAIADHQLTHGR 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V   +I  Y       +   + SL  AI +A++R   G  +  +  ++  IAD  +++ A
Sbjct: 241 V---RIAAY------QLGMAQRSLDLAIEWAKQRTTWGKPIATRQAIQWMIADSYVELEA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A ++D+   R+E  A         K +  +MA  V    ++  GG GY +E 
Sbjct: 292 ARLLVYKAAMTYDKEGGRNEAFA--------AKLYATEMAQRVTDRCLQIFGGLGYTKEL 343

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            I   YR+     I  G G A V
Sbjct: 344 PIQSFYRQIRVWRI--GHGTAEV 364


>gi|118619775|ref|YP_908107.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99]
 gi|118571885|gb|ABL06636.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 24/265 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  + ++G K +++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVREGDH-FIVNGAKTYITSGVRADFVVTAVRTGGPGAGGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFVVSRKLDKMGWRSSDTAELSYTDARIPAANLVGAENSGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIA---AAT 370
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  +D+A   + +
Sbjct: 242 ERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRS 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  I
Sbjct: 302 VVERQLAGEHDLIP----QVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEI 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
            R YR+     + +G G   +L  L
Sbjct: 351 ERQYRD--MRILGIGGGTTEILTAL 373


>gi|320450375|ref|YP_004202471.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150544|gb|ADW21922.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 409

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D AA+ ++  +  D  Y L+G K W  +   ++  ++ A 
Sbjct: 142 PLTEKPALAAFALSEPGNGSDAAALKTRAVRQGD-YYILNGTKMWISNGGEAEWVVVFAT 200

Query: 249 VEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           +   +    +V  ++E G+P G    ++  K+G R++ T EL F                
Sbjct: 201 LNPELRHKGVVALVVEKGTP-GFSAVKIHGKMGQRASGTYELVFEEVKVPVQNRLGEEGE 259

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F   +  LN +  PV           A  SV   R +L EA  YA+ R   G  +    
Sbjct: 260 GFKIAMNTLNKTRIPV-----------AAGSVGVARRALDEAKKYAKEREAFGQPIASFQ 308

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     
Sbjct: 309 AIQFKLADMMIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 361

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY+ E  + +  R+   N I  G+
Sbjct: 362 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 394


>gi|302388245|ref|YP_003824067.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
 gi|302198873|gb|ADL06444.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A   +      D  Y L+G K F+++   +D +I+ A  + ++G   +
Sbjct: 123 FGLTEPNAGTDAAMQATTASDEGDH-YLLNGSKIFITNGSYADVYIIFAVTDKKLGKKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G  +   ++K+G R +AT EL F N     +   N+     +  KI +  
Sbjct: 182 SAFILEKGMEGFTFGSKEHKMGIRGSATYELVFDNV---KVPKENLLGEAGKGFKIAMAT 238

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372
           LD   + ++   + +A+    A   +V   I   +P+      +  +AD+   + AA  L
Sbjct: 239 LDGGRIGIAAQALGIAQGAIDAAAAYVKERIQFGKPISAFQNTQFTLADMQTRVDAARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A      +  + +A+ A++       +  + A  V ++A++  GG GY  E  + R
Sbjct: 299 VYRAACMKTAGEKYTAQASMAKL-------YASETAGYVTSKAVQLFGGYGYTREYPVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKITEIYGGT 365


>gi|254524492|ref|ZP_05136547.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219722083|gb|EED40608.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 30/244 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE  GG+D  ++ +  + + DG  + +SG K W  S P++D  I+ AQ E  +  F 
Sbjct: 133 FGLTEAHGGSDPGSMKT--RAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGF- 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +LE G   G   Q +K+K+  R++ T  L F +        L ++    GP      
Sbjct: 190 ---VLEKGMA-GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGP------ 239

Query: 315 LIYLDSAIMSVS----GMRVS-LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L  A   +S    G  ++ L EA+ YA+ R + G  L      +  +A++A  I  A
Sbjct: 240 LGCLTQARFGISWGPIGAAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTA 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+ +L    +  + + ++ + A       K+  C+MA  +  E  + +GG+G   E  
Sbjct: 300 QLLALQLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHV 352

Query: 430 IARH 433
             RH
Sbjct: 353 AIRH 356


>gi|195358362|ref|XP_002045199.1| GM16092 [Drosophila sechellia]
 gi|194122553|gb|EDW44596.1| GM16092 [Drosophila sechellia]
          Length = 357

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 252 RVGCFLV--PRLLED-GSPNGLCYQRL-----KNKIGNRSNATVELEFSNTFGFLLGDLN 303
           RVGCF +  P    D G+ + +   R      ++K+G R ++T +L F +    ++   N
Sbjct: 141 RVGCFALSEPGNGSDAGAASTIATDRADHFVKEDKLGIRGSSTCQLIFEDC---VVPKEN 197

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           +   P    KI +  LD+  + ++   + + +A     + YA++R   G  +     +++
Sbjct: 198 MLGEPGFGFKIAMQTLDAGRIGIASQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQ 257

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD++L + +A  L++R A   D+ +  ++EAA A++ A      C         + ++
Sbjct: 258 KIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQ 310

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
            +GG GY+ + +  RHYR++    I  G+
Sbjct: 311 ILGGMGYVTDMAAERHYRDARITEIYEGT 339


>gi|153837598|ref|ZP_01990265.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149749095|gb|EDM59906.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 389

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F+N       +LG LN     VE +   
Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  +AD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|86360114|ref|YP_472003.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284216|gb|ABC93276.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 375

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 28/262 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + ++ ++  D  Y + G K F++S  +   I++  +     G+ G
Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-YYVIDGAKQFITSGKNGNVIIVFAITDPDAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP         G    R++ K+G  S  T ++ F+     +  DL +     E  
Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSTDTCQIAFNAMR--IPADLRLGA-EGEGY 230

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +I L  L+   + ++   V +A A       YAR R   G  + +   +   +AD+A+ I
Sbjct: 231 RIALANLEGGRIGIAAQAVGMARAAFEASRDYARERTAFGKPIFEHQAVAFRLADMAVRI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L F  A+  +       EA+ A++ A        +MA  V ++A++  GG GY+ 
Sbjct: 291 EAARQLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMA 343

Query: 427 ERSIARHYRESPANSILLGSGN 448
           +  + R YR+     I  G+ +
Sbjct: 344 DYPVERIYRDVRICQIYEGTSD 365


>gi|298290808|ref|YP_003692747.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506]
 gi|296927319|gb|ADH88128.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506]
          Length = 412

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 26/254 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A + ++ +KI DG Y L+G K W  +SP++D  ++ A
Sbjct: 143 PKLATGEWIGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLTGSKMWITNSPIADVAVVWA 201

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +    +  +  FLV R        G    +++NK+  R++ T E+      G  + + ++
Sbjct: 202 KSAAHDNDIRGFLVER-----GAKGFSTPKIENKLSLRASITGEIVLD---GVEVPEESL 253

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359
             G          L+ A   +    +  AEA + + R     R   G  L    ++++ +
Sbjct: 254 LPGASGLKGPFGCLNRARFGIGWGTIGAAEACYASARQYTLDRKQFGKPLAATQLIQKKL 313

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A +IA    L+ R    FDE +   E  +       + K   C  A  +   A +  
Sbjct: 314 ADMATEIALGLQLALRAGRLFDEGQLPVEAIS-------MLKRNNCGKALDIARLARDMH 366

Query: 420 GGSGYIEERSIARH 433
           GG+G   E  + RH
Sbjct: 367 GGNGISAEFPVMRH 380


>gi|83815178|ref|YP_445851.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
 gi|83756572|gb|ABC44685.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
          Length = 735

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 38/308 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------------Q 248
           L+E   G+D AA  S   K  DG Y L+G K W  S  MS    ++             +
Sbjct: 209 LSEPNVGSDAAAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELE 268

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G     + P +  DG      +++ + K G R        F++     + + NV    
Sbjct: 269 QQGVNALIVTPDM--DGVE---VFEKNRAKTGIRGTWQARFRFNDV---RVPEENVLHEE 320

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
              +K+ L  L+    ++S      A+A     I +A+ R+     L D  ++K+ IA +
Sbjct: 321 GAGLKVALSCLNYGRCTLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARM 380

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +    A  A+ + +    D+ +          +   ITK +C      VI EA++ +GG 
Sbjct: 381 SAVTYAMDAMLYMMTGLLDQGEDD------IMVETAITKVFCSDFGWNVIDEALQVMGGE 434

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLG 477
           GY+ E  + R +R++  + I+ GS   M   +       L EK  ++ E L    ++ +G
Sbjct: 435 GYMTEHELERAWRDNRIHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIG 494

Query: 478 SSGKKVIT 485
            +  +++T
Sbjct: 495 DNLSRILT 502


>gi|329890061|ref|ZP_08268404.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328845362|gb|EGF94926.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 379

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +   +  D  Y L+G K F+S +  SD ++++ +  G     +   
Sbjct: 124 LTEPGSGSDAAALRTTAVRDGD-HYVLNGAKAFISGAGTSDVYVVMVRTGGEGPKGISTI 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P GL +   + K+G  +  T  + F       +N  G        +   ++  +
Sbjct: 183 VVEAGTP-GLSFGANEKKMGWNAQPTAVVSFDDCRVPVANLVGEEGAGFKYAMAGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G R++L  A  Y   R   G  +      +  +AD+A D+ AA  + 
Sbjct: 242 LNI----AACSLGGARLALETAQEYVAGRKQFGQAIGQFQNTQFELADMATDLEAARLMV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A + D      E+  +  +   +T   C ++A     +A++  GG GY+++  + R 
Sbjct: 298 LRGAWAID--TGHPEKTKWCAMAKRLTTDACFQIAD----QALQLHGGYGYLKDYPLERI 351

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461
            R+   + IL G+   M + V   L +G
Sbjct: 352 VRDLRVHRILEGTNEIMRVIVARELARG 379


>gi|209515548|ref|ZP_03264413.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504015|gb|EEA04006.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 29/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252
           L +TE + G+D++ I +  ++  +G Y L+G K W  +S ++D  ++ A+    EG+   
Sbjct: 121 LSITEAQSGSDVSGIRTTARR-KNGGYVLNGSKIWCTNSHIADFILVAAKTLDEEGQPLG 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           V  F+V R     +P GL     ++K+G R  A+  L F + F      L    G  +  
Sbjct: 180 VNLFIVDR----NTP-GLTIGNEEDKMGARGVASCPLYFDDAFIRTEDRLGPEGG--QGF 232

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +  L+++   V+   V +A+      + + + R   G  + +   ++  IAD+    
Sbjct: 233 KVAMEALNTSRPIVAARAVGIAQGAIDHTVKFIQDRVAFGQTISNFQGVRWMIADMVTQT 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+  D A  R  E A    +A + K +   +A  V  +A++  G +G   
Sbjct: 293 EAARQLVYRTASLVD-AGVRGRELAP---IAAMAKMFASDVAMKVATDAVQLFGAAGISN 348

Query: 427 ERSIARHYRESPANSILLGSG----NAMVLDVLNLLEK 460
           E  I R++R++    I+ G+     N +  +VL  ++K
Sbjct: 349 EYPINRYFRDAKVVQIIEGTNQIQRNIVADNVLGRIKK 386


>gi|47522692|ref|NP_999062.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Sus scrofa]
 gi|2829676|sp|P79274|ACADL_PIG RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|1695729|dbj|BAA13965.1| long-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 430

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 29/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  +SD  I++
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWLSDVVIVV 216

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E R     +   L +    G    R  +KIG ++  T EL F +       LLG+
Sbjct: 217 AVTNREARSPAHGISLFLVENGMKGFVKGRKLHKIGLKAQDTAELFFEDVRLPASALLGE 276

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            N      +   P E + I      A ++VS       E  +Y ++R   G  +     +
Sbjct: 277 ENKGFYYLMQELPQERLLI------AELAVSASEFMFEETRNYVKQRKAFGKTVAHIQTV 330

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++   I    A         D      E        A + KYW  ++  +V  + 
Sbjct: 331 QHKLAELKTHICVTRAF-------VDSCLQLHETKRLESAAASMAKYWASELQNSVAYDC 383

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 384 VQLHGGWGYMWEYPIARAYVDARVQPIYGGTNEIM 418


>gi|332525953|ref|ZP_08402094.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
 gi|332109504|gb|EGJ10427.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
          Length = 594

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 159/387 (41%), Gaps = 71/387 (18%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG+ M  +  +A+++A   TP   + +A ++F+ E+  T             + L+E + 
Sbjct: 121 AGYAML-TTGNANLIAAHGTPAQRETFARRLFAGEWFGT-------------MCLSEPQA 166

Query: 208 GTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254
           G+ ++ + ++ +    G         Y L GHK ++S    +       ++LA++    G
Sbjct: 167 GSSLSDVATRAEPDGPGHEADALGPRYRLRGHKMWISGGEHELAANIVHLVLAKIPDETG 226

Query: 255 ----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--- 296
                      F+ P+ L       G  N +    L +K+G R      L F    G   
Sbjct: 227 RLPPGVKGLSLFICPKFLPGPDGRLGRRNDVALAGLNHKLGYRGTTNTLLNFGERDGAVA 286

Query: 297 FLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGIL 349
           +L+G     L      + + +I + L + ++  +G   SL     YAR+R      G   
Sbjct: 287 WLVGRPGDGLRCMFHMMNEARIAVGLGAVMLGWAGYEASL----EYARQRPQGRPLGAKD 342

Query: 350 IDQPVM--------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-AR----IM 396
             QP +        +R +      +    ALS   A   DEA++ + EAA  AR    ++
Sbjct: 343 ATQPQVPILRHVDVRRMLLAQKSYVEGGLALSLYCARLVDEARTGAPEAAADARRLLDLL 402

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++ +GG GY  +  + +++R++  N I  G+     LD+L 
Sbjct: 403 TPIAKSWPSEWCLEANSLAIQVLGGCGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLG 462

Query: 457 --LLEKGTNLFEQLFSTLEQDLGSSGK 481
             +L  G    + L + ++     +G+
Sbjct: 463 RKVLADGGAALKLLVTRIDATAQRAGQ 489


>gi|319781710|ref|YP_004141186.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167598|gb|ADV11136.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 398

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 23/243 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ +K ++G Y LSG K W  ++P++D F++ A+++G  G   +
Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTANG-YKLSGSKMWISNAPVADVFVVWAKLKGENGKDEI 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    GL   ++  K+  R++ T E+           LL +     GP       
Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 251 GCLNRARFGISWGSMGAAEDCWHRARQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGL 310

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE K   E       M  I K   C  A  +  +A +  GG+G      +
Sbjct: 311 QASLRVGRLLDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363

Query: 431 ARH 433
            RH
Sbjct: 364 MRH 366


>gi|288555266|ref|YP_003427201.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288546426|gb|ADC50309.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 381

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           P+ +       GLTE   G+D     +Q + + DG  Y ++G K ++++      +++  
Sbjct: 113 PLAQGQSLGSFGLTEPNAGSDAGG--TQTKAVLDGDEYVINGEKCWITNASYARTVIVTA 170

Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           V G+   G  +   L+      G        K+G R++ T EL   +       LLGD  
Sbjct: 171 VTGKDERGKNITSALIVPTDAPGFTINSNYEKMGVRASNTCELVLEDVRVPKENLLGD-- 228

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
               P    K  +Y LD   +S++ + V +A+A     + Y++ R   G  +     ++ 
Sbjct: 229 ----PQGGFKQFLYTLDGGRISIAALGVGIAQAAFERALAYSKERKQFGKTISSFQAIQF 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A++I  A  +  + A   D+ ++  +EAA+A++ A  T       A     +A++
Sbjct: 285 KLADMAMEIELARNMVMKAAWLKDQNRAFGKEAAFAKLYASET-------ATRTANQAIQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG GY+ E  + R  R+  A  + +G G + +
Sbjct: 338 IHGGYGYMREYEVERMLRD--AKLLEIGEGTSEI 369


>gi|261323300|ref|ZP_05962497.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261299280|gb|EEY02777.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 376

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S   S+  I+ A  +   G   
Sbjct: 121 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNSNVAIVFAVTDPAAGKKG 179

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 180 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 235 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 291 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 344 ADYPVERIYRDVRVCQIYEGTSDVQRL 370


>gi|296214195|ref|XP_002753594.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 423

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|282883257|ref|ZP_06291855.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B]
 gi|300814305|ref|ZP_07094577.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281296887|gb|EFA89385.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B]
 gi|300511572|gb|EFK38800.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
            GLTE   GTD     + GQK +   DG  Y L+G K F+++   +D F+++A  +   G
Sbjct: 123 FGLTEPGAGTD-----ASGQKTTAVLDGDEYVLNGSKIFITNGGFADVFVVIAVTDKTKG 177

Query: 255 CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +   ++E G+P G      ++K+G R ++T EL F         D  +   P E++ 
Sbjct: 178 YKGISAFIVEKGTP-GFSVGEPEDKMGIRGSSTCELIFE--------DCRI---PKENLL 225

Query: 314 ---------ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                     L  LD   + ++   + +AE      + Y + R   G  +      +  +
Sbjct: 226 GREGKGYTLALKTLDGGRIGIASQALGIAEGAIDETVKYVKERKQFGKRISQFQNTQFQL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+     AA  L +R A++    K   EE  +   MA   K +  + A  V    ++  
Sbjct: 286 ADMQTKTDAAQLLVYRAAST----KGNGEEYMHQAAMA---KLFAAENASDVTRRCLQLF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  +  I R  R++    I  G+   M + V N +
Sbjct: 339 GGYGYTRDYPIERMMRDAKITEIYEGTSEVMRMVVSNWM 377


>gi|119471972|ref|ZP_01614257.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium
           TW-7]
 gi|119445230|gb|EAW26521.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium
           TW-7]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ ++  +  D  Y ++G K F+S +  ++  +++A+  G     +  F
Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEVLVVMARTGGEGAAGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP         G+ Y + + K+G  +  T  + F +     +   N+     E  K  +
Sbjct: 183 VVP-----ADAQGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAHNLLGAEGEGFKFAM 234

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+   + +L  A  Y + R   G  L     ++  IAD+  ++ AA 
Sbjct: 235 QGLDGGRINIATCSIGTAQAALNTAREYLKERSQFGKPLAAFQALQFKIADMNTELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  RLA +F      SE+  Y      + K +   +   V  EA++  GG GYI+E  +
Sbjct: 295 QM-VRLA-AFKLDTGDSEKTTYC----AMAKRFATDVGFTVCNEALQIHGGYGYIKEYPL 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            RH R+   + IL G+   M
Sbjct: 349 ERHVRDVRVHQILEGTNEIM 368


>gi|66805817|ref|XP_636630.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4]
 gi|74852534|sp|Q54IM8|ACAD8_DICDI RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8 homolog;
           Flags: Precursor
 gi|60465018|gb|EAL63127.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4]
          Length = 416

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 60/393 (15%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK E+ P    ++R +   G    I+       VR+       +RL     +EA
Sbjct: 60  PFAEKWDKEEYFP--RDVMREAAELGFG-GIY-------VREDVGGSGLSRLDASIIIEA 109

Query: 149 GHLMSPSVTS----------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L S  V++          A ++ +  T    K + P + S          M+K +   
Sbjct: 110 --LASADVSTTAFISIHNMCAGLIDIYGTEEQRKKFLPSLVS----------MEKIASYC 157

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              LTE   G+D  +++++  K  D  Y L+G K F+S    D+ + L  V  R G    
Sbjct: 158 ---LTEPGSGSDAGSLSTKATKDGDH-YILNGSKAFISGG-GDSEVYLVMV--RTGAEKG 210

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+     L+E  +P GL + + + K+G  +  T  L F +     +G+L    G  +   
Sbjct: 211 PKGISCLLVEKDTP-GLSFGKKEEKLGWNTQPTRALIFEDCR-VPVGNLIGKEG--QGFS 266

Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           I +  L+   +++    +  A++   A R HV      +QP+     ++  +AD+A  + 
Sbjct: 267 IAMNALNGGRINIGACSLGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLH 326

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+  +  R A +  +AK  S     A +   + K + C     V  ++++  GG GY+++
Sbjct: 327 ASRIM-IRNAAAMLDAKDPS-----AHVYIAMAKLFACDECFKVTDDSLQLFGGYGYLKD 380

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R+ R+   + IL GS   M L +   L K
Sbjct: 381 YPVERYLRDLRVHRILEGSDAVMRLIISRELSK 413


>gi|294499119|ref|YP_003562819.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294349056|gb|ADE69385.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 592

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219
           +    T    + + PK+ S EY              IG   LTE   G+D +AA T    
Sbjct: 122 ITYFGTKEQKEKYLPKLASGEY--------------IGAYCLTEPEAGSDALAAQTKAVL 167

Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKN 277
                 Y L+G K +++ +  SD FI  A+V+G     F+V +  E     GL     + 
Sbjct: 168 NPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEHFTAFIVEKGFE-----GLSLGPEEK 222

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRV 330
           K+G + ++T  + + +       +LG   V  G +  + +L      L SA M  +    
Sbjct: 223 KMGIKGSSTRPVIYEDCLVPVENVLG--QVGKGHLIALNVLNLGRFNLGSACMGAAKYAF 280

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            LA A  Y + R      + +    K  IA +A  I A+ ++ +R A   +EA     E+
Sbjct: 281 ELALA--YTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEEALGGLYES 338

Query: 391 AYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +++A           + K +  +    +  EA++  GG+G+I+E  I + YR+S  N
Sbjct: 339 ENHKLVAKQLAEFAMECSVCKVYGSETLDLIADEALQLHGGAGFIQEYKIEQVYRDSRIN 398

Query: 441 SILLGS 446
            I  G+
Sbjct: 399 RIFEGT 404


>gi|295691104|ref|YP_003594797.1| butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756]
 gi|295433007|gb|ADG12179.1| Butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 42/276 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P + S E             V     LTE   G+D  A+ ++     D  Y L+G K 
Sbjct: 109 WLPGVASGE-------------VITSFALTEPEAGSDSGAVQTRATLDGDA-YVLNGSKR 154

Query: 234 FLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++++   +  F ++A+        G V  FLVPR L      GL   + + K+G +    
Sbjct: 155 YITNAGKASLFTVMARTNPDVKGGGGVSAFLVPRDLP-----GLSVSKPEKKMGQQGAHI 209

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340
            ++ F N    +   L       E  K+ +  LD   + ++ + V +AE      + YA 
Sbjct: 210 HDVTFDNVRVPVENRLGAEG---EGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYAS 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +  +++  IAD   +  AA AL    A   D     + EAA        +
Sbjct: 267 ERKQFGQPIANFQLIQAMIADSKTEALAARALVLETARKRDAGVGVTLEAAA-------S 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           K +  +M   V   A++  GG+GY+ +  I R YR+
Sbjct: 320 KLFASEMVGKVADRAVQIFGGAGYVADYGIERLYRD 355


>gi|226308408|ref|YP_002768368.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187525|dbj|BAH35629.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 48/283 (16%)

Query: 195 SVAIG-----LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-- 246
           S+A G     + +TE   G+D+A I +  +   DG  Y L+G K F++  ++    ++  
Sbjct: 114 SIATGEKTLCIAMTEPGTGSDLAGIRTTAKLSDDGTHYILNGAKTFITGAVNSELCVVVA 173

Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                A+ + R G  L+  ++   +P G  Y R   K+G R++ T EL F+        D
Sbjct: 174 RTSAPAEDDRRFGLSLM--VVPTDAP-GFEYGRKLEKLGLRASDTSELSFT--------D 222

Query: 302 LNVSTGPVEDM-----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGG 347
           + V   PV D+     K   YL   +           V+  R ++  A  Y + R V G 
Sbjct: 223 VKV---PVADLLGEQDKGFSYLGQNLPRERLSIGSRGVASARAAIEFAKAYVQERQVFGK 279

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A+ + ++ AA AL+ R     D  +  + +AA  RI     K +  ++
Sbjct: 280 PVAAFQNTKFVLAECSAEVEAAQALADRGIELDDSGELTAADAA--RI-----KLFGTEV 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  VI + ++  GG GY+ E  IAR Y ++  + I  G+   M
Sbjct: 333 AARVIDKCLQLHGGYGYMLEYPIARLYADTRVSRIYGGTSEVM 375


>gi|295836976|ref|ZP_06823909.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697435|gb|EDY44368.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +SD + ++A 
Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGDS-WVLNGVKRWITNAGVSDFYTVMAV 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+ F N    +  D  +    
Sbjct: 175 TDPAKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 233 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I+AA AL+++ A     A  R +  A    +    K +   +A  V  +A++ +G
Sbjct: 290 DMAMKISAARALTYQAA----AASERGD--ADLTYLGAAAKCFASDVAMEVTTDAVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369


>gi|187926031|ref|YP_001892376.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665518|ref|YP_002983877.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187727785|gb|ACD28949.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867545|gb|ACS65205.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 22/245 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+ S  ++  +  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 130 FALSEPDAGSDVAAMASAAREDGND-YVLDGEKTWISNGGIADFYVVFARTGEAPGSRGI 188

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
              ++E G+P     +R+ N I    +    L F+N    +     V     E  K+ + 
Sbjct: 189 SAFIVEAGTPGFEIAERI-NVIA--PHPLARLRFTNCR--IPASQRVGAAG-EGFKVAMR 242

Query: 317 YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD    SV+       R +L EA+  A  R +  G+L D  + +  +A +A  I +A  
Sbjct: 243 TLDVFRTSVAAAALGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAAL 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A   D+ ++ + EAA A++ A        + A  VI  A++  GG G + E+ + 
Sbjct: 303 LTYRAAWQRDQGRNVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPVE 355

Query: 432 RHYRE 436
           R YRE
Sbjct: 356 RLYRE 360


>gi|17987180|ref|NP_539814.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|256044744|ref|ZP_05447648.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565653|ref|ZP_05836137.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265991166|ref|ZP_06103723.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|17982848|gb|AAL52078.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260151721|gb|EEW86815.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263001950|gb|EEZ14525.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 394

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              + A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCFNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|260365626|ref|ZP_05778147.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
 gi|308111453|gb|EFO48993.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
          Length = 389

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F+N       +LG LN     VE +   
Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  ++   +AD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVHGKLADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQIALDAIQLLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|71424988|ref|XP_812975.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70877815|gb|EAN91124.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 30/309 (9%)

Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           VH      IF R  +    A   P   +S      LTE   G+D  A+ ++ +K  D  +
Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++   +D F+++A V+   G     CF+V +       +G+   R  +K+G
Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335
            R+++TVE+ F N     + + N+     +  +I I  L+   + +    V +A+     
Sbjct: 229 LRASSTVEINFENC---EVPEENLIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285

Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y  +R      + D   ++   A+ A +I AA  + +  A      +S  +EAA A+
Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAECATNIHAARLMVYNAARKKLMGESFVKEAAMAK 345

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +          ++A    ++A+E  GG G+  +  + R YR++   +I  G+    +  +
Sbjct: 346 LFGS-------QVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIGAIYEGTSIIQLQTI 398

Query: 455 LNLLEKGTN 463
             L++K  N
Sbjct: 399 AKLIKKEYN 407


>gi|322493339|emb|CBZ28625.1| putative acyl-CoA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 629

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 55/363 (15%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++A    G  M P ++  +   LM+  +  +   + PK+ S E+  T             
Sbjct: 144 MIATANWGFSMYPGLSLGACRTLMSWASDEMKDQYLPKLVSGEWSGT------------- 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253
           + LTE + GTD++ + ++ +   DG  Y +SG K F+S+    ++D  I  +LA++   +
Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYRISGTKIFISAGDHDLTDNIIHVVLARLPNSL 250

Query: 254 ------GCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   FLVPR +  +DGS     N  C   L+ K+G + ++T +L F N+ G+L+G+
Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEAARNVECIA-LEKKMGIKGSSTCQLSFQNSVGYLIGE 309

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVMKRA 358
            +     +        +  A+  +    ++    + YAR R      GG    + V  R 
Sbjct: 310 PSAGMKQMFTFMNAARVGCALEGICHAELAFQNGLRYARERRSMRALGGTKEPEMVADRI 369

Query: 359 I--ADIALDIAAATALS-------FRLANSFDEAKSRSEEAAYARI------MAPITKYW 403
           I  A++  ++  A A++         +    D   +  + A    +        PI K  
Sbjct: 370 ICHANVRQNVLFAKAIAEGGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKAC 429

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
             +      +  ++  GG GYI+   + +  R+S   +I  G+     LD +    L  K
Sbjct: 430 VTEWGVEAASRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTK 489

Query: 461 GTN 463
           G N
Sbjct: 490 GGN 492


>gi|256391383|ref|YP_003112947.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256357609|gb|ACU71106.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 50/306 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ S E             +    GLTE  GG+D A  T     + +G +
Sbjct: 103 TEEQKQQWLPKLCSGE-------------MLGAFGLTEPGGGSD-AGGTRTTAVLENGEW 148

Query: 227 CLSGHKWFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++G K F+++  +D    I +  V G        +   +VP     G+P GL      +
Sbjct: 149 VINGTKCFITNSGTDITGLITVTAVTGTKPDGRKEISSIIVP----SGTP-GLTVAPKYS 203

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333
           K+G  ++ T EL F++       LLGDL            L  LD   ++++ +   L+ 
Sbjct: 204 KVGWNASDTRELSFTDVRVPEANLLGDLGRGYA-----NFLRTLDEGRIAIAALSTGLSQ 258

Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E++ YAR R   G  +     ++  +AD+ L      A + RLA  + +A SR   
Sbjct: 259 GCVDESVKYARDREAFGRPIGANQAIQFKLADMRL-----RAHTSRLA--YYDAASRMLA 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +  A + K +  + A     EA +  GG G++ E  +AR +R+S    + +G G +
Sbjct: 312 GEPFKAEAAMAKLYSSESAVTNAREATQIHGGYGFMNEFPVARMWRDS--KILEIGEGTS 369

Query: 450 MVLDVL 455
            V  +L
Sbjct: 370 EVQRML 375


>gi|33603689|ref|NP_891249.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577814|emb|CAE35079.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 386

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 40/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           +G++E   G+D++ I +  ++  D  Y ++G K W  +    D   +L       G    
Sbjct: 123 IGVSEASAGSDVSQIKTWARRDGDD-YVINGSKMWITNGVQGDWICLLCNTSQEGGPHKN 181

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PV 309
               +VP         G+   R  +K+  R++ T EL F         D+ V        
Sbjct: 182 KSLIIVPL-----DTPGVSVSRKLDKLVLRASDTAELFFD--------DVRVPVSNRIGA 228

Query: 310 EDMKILIYLDS-----AIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E+M  +  ++        ++  GMR     + E I YA +R V GG ++   V+   +A 
Sbjct: 229 ENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQ 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I A  +L +R    + + +  ++       +A + KY   +++  +  E ++  GG
Sbjct: 289 MQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G + E  I+R YR+    +I  G  N ++L+V+
Sbjct: 342 QGVMNENWISRAYRDLRQTAI-GGGANEIMLEVI 374


>gi|329896697|ref|ZP_08271690.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
 gi|328921633|gb|EGG29009.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 39/288 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   LG++E   G+D+  I +   +  D  + L+G K 
Sbjct: 108 WLPKMVTGE-------------VVGALGMSEPGAGSDVQGIKTNAVRDGDE-WILNGSKI 153

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++ M +D  I+ A  +   G       L D S  G    +  +KIG  ++ T  L F 
Sbjct: 154 FITNGMHADLVIVAAITDPGKGAKGTSLFLVDTSLPGFERGKKLDKIGQHASDTALLFFQ 213

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           +       LLG+ N   G V  M+ L    L  A  +V   + +L   + Y + R   G 
Sbjct: 214 DMRLPADALLGEEN--KGFVIMMQELPRERLGIAAQAVYQAQGALDLTVQYVQERQAFG- 270

Query: 348 ILIDQPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
               QP+ K       +AD+  +IA   AL    A  +   +  +++AA  ++ +     
Sbjct: 271 ----QPIAKFQNTRFKLADVKTEIALNKALYESCAAQYARGELTTDDAAMLKLAS----- 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             C M   V+ + ++  GG GY  E  I+R Y ++    I  GS   M
Sbjct: 322 --CDMQCRVVDDCLQLFGGYGYTTEYPISRFYVDARIQRIYGGSAEIM 367


>gi|324508921|gb|ADY43761.1| Very long-chain specific acyl-CoA dehydrogenase [Ascaris suum]
          Length = 620

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 31/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQ--VEG------ 251
           LTE   G+D  +I S+  K +DG  Y L+G K W  ++  +D F + AQ  V+G      
Sbjct: 191 LTEASSGSDANSIRSRADKTADGKYYILNGGKLWISNAGFADVFTVFAQTPVQGEDGITK 250

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            +V  F+V R     S  G+ +   + K+G + + T E+ F NT      LLG      G
Sbjct: 251 DKVSAFIVER-----SHGGVTHGPPEKKMGIKGSNTAEINFENTKVPVENLLG--KEGEG 303

Query: 308 PVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL      I +     M+  + + + +   R   G  L D   ++  + D+   
Sbjct: 304 FKVAMNILNNGRFGIPAACTGSMKWCIKKTVDHITERTQFGKKLKDFGNVQEQLVDMITR 363

Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A  ++ + LA++ D+     + EAA  ++MA    +  C         A++  GG GY
Sbjct: 364 HYATESILYMLASNMDKGVQDYQLEAAIGKVMASENAWRVCDA-------AIQLHGGMGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
           ++E  + R  R+     I  G+ + + L
Sbjct: 417 MKECGLERVLRDLRIFRIFEGANDVLRL 444


>gi|299472599|emb|CBN78251.1| acyl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 412

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A  +  +   D  + L G K W  ++  + + I+ A  +       +  
Sbjct: 155 LSEPGNGSDAGAARTTARLEGD-QWVLDGTKAWITNAHDAQSSIVFATTDSSKKHKGISA 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP  LE  +P G+   + ++K+G R+++T  L           LLG+  +        
Sbjct: 214 FIVP--LE--TP-GMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEEGMG------F 262

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD+  + ++G  + +A A     + Y+  R   G  +     ++  I+++++ +
Sbjct: 263 KIAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQSKISEMSMKL 322

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+++ A + D  ++ ++EAA A++ A  T  +C   A       ++ +GG GY+ 
Sbjct: 323 DAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAA-------IQVLGGMGYVS 375

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 376 EMPAERHYRDARITEIYEGT 395


>gi|315506651|ref|YP_004085538.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413270|gb|ADU11387.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 40/281 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D AA+T++  +   G + ++G K F+++  ++D  ++ A+  G     +  F
Sbjct: 125 LTEPDSGSDAAALTTRATR-DGGDWLITGAKTFITNGTVADVVLLFARTGGPGHRGISAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LVP      +  GL  + +  K+G R  AT EL F       S   G + G   ++    
Sbjct: 184 LVPT-----NVAGLTRREIHGKLGLRGQATGELRFDAVRVPDSARLGPVGGGFRLA---- 234

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  L    MSV+   V +A+     A+ YA +R   G  +    ++++ +A IA+
Sbjct: 235 -----LATLAKGRMSVAAGCVGIAQGCLDAAVGYAGQRTQFGKPIAGHQLVQQLLAAIAV 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D AAA  L +R+A+  D  ++ + EA+ A++ A        + A      A++  GG GY
Sbjct: 290 DTAAARLLVWRVADLVDRGEAFATEASMAKLFA-------SEAAVRAANNAVQVFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           I+E  + ++ R++   ++  G+     L +   L  G N F
Sbjct: 343 IDEYPVGKYLRDARVATLYEGTSQIQQLLIGRAL-TGVNAF 382


>gi|254469198|ref|ZP_05082603.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211961033|gb|EEA96228.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 379

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 22/268 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ ++  +  D  Y ++G K F+S   +SD ++ + +  G  G   +  
Sbjct: 124 LTEPGAGSDAASLRTRAVRDGDH-YVINGSKSFISGGGVSDVYVCMVRT-GEDGPKGISC 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++ +    GL +   ++K+G  S  T ++ F       +N  G      +++   ++  +
Sbjct: 182 IVVEKDAPGLSFGANEHKLGWCSQPTAQVIFEDCRVPVANLVGAEGQGFSIAMAGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I       S+ G +  L  A+ Y   R   G  L     ++  +AD+A ++ AA  L 
Sbjct: 242 LNI----GACSLGGAQFCLDRALQYMDERKQFGRSLAQFQALQFKVADMATELEAARLLL 297

Query: 374 FRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + A   D    + ++ AA A+ +A  T +        V+ EA++  GG GY+++  + R
Sbjct: 298 HKAAYMLDRKDPQVTKMAAMAKRLATDTGF-------KVVNEALQIHGGYGYLKDYPLER 350

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
           H R+   + IL G+   M + V   L K
Sbjct: 351 HLRDLRVHQILEGTNEIMRVIVARELMK 378


>gi|331003594|ref|ZP_08327091.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412435|gb|EGG91826.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 36/264 (13%)

Query: 200 LGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEG 251
             LTE   G+D  +A T+     S   Y L+G K F++      ++++        + +G
Sbjct: 122 FALTEPNAGSDAGSARTTAIYDESKEEYVLNGTKCFITGGGLAKYVLVFALTSPELKTKG 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
            + C LV R    G+P G    ++++K+G   + T EL F N     G L+G L      
Sbjct: 182 -LSCILVER----GTP-GFSIGKIEDKMGLHGSETAELIFDNCRVPKGNLIGPLG----- 230

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +  LD A + ++   V +A     E+I Y + R   G  +     ++  +A++
Sbjct: 231 -KGFKIAMTALDGARIGIAAQAVGIAAGALDESIKYTKERVQFGRPISSLQGLQWYLAEM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +  A  +++R A+        ++EAA       I K+   K A  V  +A++  GG 
Sbjct: 290 ATKVECARWMTYRAASLKVSGLPHTKEAA-------IAKFNASKTAVEVTDKALQLHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+ E  + R YR++    I  G+
Sbjct: 343 GYMREYPLERMYRDAKITEIYEGT 366


>gi|291403234|ref|XP_002718028.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase [Oryctolagus
           cuniculus]
          Length = 423

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 57/300 (19%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YVLNG 191

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  I+ A+ +       VP        L+E   P G    +  +K+G R
Sbjct: 192 NKFWITNGPDADVLIVYAKTDMAA----VPASRGITAFLVEKNMP-GFSTSKKLDKLGMR 246

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKILIY-LDSAIMSVSG-----MRVS 331
            + T EL F         D NV    V     + + +L+  LD   + ++G     M+  
Sbjct: 247 GSNTCELIFE--------DCNVPAANVLGHVGKGVYVLMSGLDLERLVLAGGPLGLMQAV 298

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   I Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A
Sbjct: 299 LDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCA 358

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              +       +  + A  V  + ++C+GG+GYI +  + R  R++    I  G+G + V
Sbjct: 359 GVIL-------YSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|257388129|ref|YP_003177902.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170436|gb|ACV48195.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 376

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
             L+E   G++   + +  ++  D  Y + G K W  +   S   I+ A+ +      V 
Sbjct: 120 FALSEPEAGSNPRQMQTVARREGDE-YVIDGEKAWITNGQRSGVVIVFAKTDPDDPNSVT 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------S 305
            FLVP+       +GL     + K+G R+        S+T    L D+ +          
Sbjct: 179 QFLVPK-----DSDGLTVGSKEEKLGLRA--------SDTTTLTLDDVRIPDRYRLTEEG 225

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    + IL    +  A  +V   + +L EA+ Y   R    G + D   ++  IA++ 
Sbjct: 226 RGLAAALSILTGGRVGIAAQAVGLSQAALDEAVDYVTEREQFDGPIGDIQSVRHTIAEME 285

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A   L+   A + D           AR  A + KY+  + A  V  +A++  GG G
Sbjct: 286 TTVRAGRELTHAAARAMDRGDD-------ARASASVAKYFATEGAVDVTQQAVQLHGGYG 338

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R YR++   +I  G+
Sbjct: 339 YTSEFDVERFYRDAKVTTIYEGT 361


>gi|229542456|ref|ZP_04431516.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326876|gb|EEN92551.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 18/278 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +       GLTE   G+D  A+ +  ++  D  Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PLARGEKIGAYGLTEPGSGSDAGAMVTTARREGDH-YVLNGSKIFITNGGVADIYIVFAL 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            + +         + +    G    + + K+G R++ T E+ F N    ++   N     
Sbjct: 172 TDPKSKHHGTSAFIIEKDFPGFSTGKKEKKMGIRASTTTEIIFDNV---IVPAENRLGEE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI ++ LD     ++   V +A+     A  YA+ R   G  +     +   +AD+
Sbjct: 229 GQGFKIAMMTLDGGRNGIAAQAVGIAQGALDAATAYAKERKQFGKPIAANQGVSFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L+++ A          +E+A +++ A  T       A  V  EA++  GG 
Sbjct: 289 ATAVEAARLLTYQAAWLESNGLPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY ++  + R  R++    I  G+     L +  +L +
Sbjct: 342 GYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379


>gi|92116366|ref|YP_576095.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91799260|gb|ABE61635.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 404

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML---AQVEGRVGC 255
            GLTE   G+D   + ++ +K+SDG Y L+G K W  ++P++D F++    A  + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTRAEKVSDG-YRLTGSKTWISNAPIADLFVVWVRSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASCTGEIVMDGVVVPEENLLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S G+  +  + +H AR+    R   G  L    ++++ +AD+  DIA
Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARKYVLERKQFGRPLAATQLVQKKLADMQTDIA 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|254464312|ref|ZP_05077723.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206685220|gb|EDZ45702.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A++ ++ +K ++G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPASMKTRAEK-TEGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + L+     GL   +++NK   R++ T E+           LL  +    GP    
Sbjct: 207 FVLDKGLK-----GLSAPKIQNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AEA  +A R     R   G  L +  + +  +A++  +I 
Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHAARQYGLDRTQFGRPLANTQLFQLKLANMQTEIT 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA +  E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 316 LGLQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARMARDMHGGNGISLE 368

Query: 428 RSIARH 433
            ++ RH
Sbjct: 369 FNVIRH 374


>gi|221065703|ref|ZP_03541808.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710726|gb|EED66094.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 397

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K+ DG Y L G+K W  +
Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           F        D+    GP         L+SA   ++   +  AE     A  Y   R   G
Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C 
Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLIKRNNCG 337

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +   A + +GG+G  +E  +ARH
Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364


>gi|107100206|ref|ZP_01364124.1| hypothetical protein PaerPA_01001229 [Pseudomonas aeruginosa PACS2]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIAARRLLEQGGML 383


>gi|56421541|ref|YP_148859.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56381383|dbj|BAD77291.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 594

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 35/269 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            R        G+     + K+G +S++T       V +   N  G       +  G V  
Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL        + +V G + +L   + YA +R      +    + +   A +A  + AA
Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318

Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  +R    FDE             K  ++  A   I   + K++  ++   ++ E ++
Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG G+++E  I R YR+S  N I  G+
Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGT 407


>gi|226315082|ref|YP_002774978.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226098032|dbj|BAH46474.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D ++I +   K  D  Y L+G+K F+++   +D +I  A  +   G   +
Sbjct: 123 FALTEPHAGSDASSIRTTAVKKGDE-YILNGNKVFITNGGEADTYIAFAVTDSTKGPKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + D    G    + + K+G   + T EL F N     +   N+     E   I +  
Sbjct: 182 SAFIVDKDTPGFTVGKKEKKMGLHGSYTTELVFDNA---RVPAANLLGQEGEGFCIAMAN 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDS  + ++   + + E     A  YA+ R   G  +  Q  +   +AD+A     A  L
Sbjct: 239 LDSGRIGIAAQALGICEAAVQYATEYAQERKQFGQSIAKQQAIAFKLADMATKAEVARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A    +  +   EA+ A       K +    A  +  EA++  GG GY  E  + R
Sbjct: 299 VYRAAWLRSQGIACGMEASMA-------KRFATDSAMELATEAVQIFGGYGYTREYPVER 351

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 352 LFRDAKVTQIYEGT 365


>gi|291000919|ref|XP_002683026.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi]
 gi|284096655|gb|EFC50282.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi]
          Length = 404

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 128/281 (45%), Gaps = 33/281 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 142 LAMSEPNSGSDVVSMKTRAEKKGDK-YILNGNKMWITNGPDADVLVVYAKTDISAGSKGI 200

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K G R + T EL F +       +LG +N      E +K+L
Sbjct: 201 TAFIIEKGFKGFSTAQKLDKCGMRGSNTCELVFQDCEVPVENVLGKVN------EGVKVL 254

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++G  + L E      + Y   R   G  + +  +M+  +AD+   +   
Sbjct: 255 MSGLDYERCILAGGPLGLMEGCMDVVVPYVHERKQFGQSIGEFQLMQGKLADMYTKLNVC 314

Query: 370 TALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  + +A + D    +K   ++ A A + A     W       + ++A++ +GG+GY +
Sbjct: 315 RSYVYSVARACDLSPTSKPLRKDCAGAILYAAEGATW-------LASQAIQTLGGNGYTK 367

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           E  + R +R++    I  G+G + +  +L     G  LFE+
Sbjct: 368 EYPVERIWRDAKLYEI--GAGTSEIRRML----IGRELFEE 402


>gi|239980708|ref|ZP_04703232.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291452567|ref|ZP_06591957.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291355516|gb|EFE82418.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 608

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  + +DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G+ NG     +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYEFDWETGEIGARNGAYATNVEHKMGLKASNTCEMTFGDKHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356
            +   G  +  +I+ +  +     +++ +      A+ YA+ R V G  L   +D+   K
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLAQFMDKTAPK 340

Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399
             I    D+  +L    A A   R        + ++    ++  E+A    A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRTLVLYTAAVQDTIQVKEAAGEDATADHALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  + +   +A++++  GGSGY++E  I ++ R++  +++  G+
Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT 447


>gi|262204245|ref|YP_003275453.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087592|gb|ACY23560.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 611

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKATQQEDGSWHIDGVKRFITSADQDMTENIFHLVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300
             +  F VP+   D      G  NG+    +++K+G +++AT E+ F        G+L+G
Sbjct: 224 KGLSLFFVPKFHFDFETGELGERNGVFVTNVEHKMGLKASATCEVTFGQHGTPAKGWLVG 283

Query: 301 DLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------- 347
           +++         +E  ++++       ++S +      A+ YA+ R V G          
Sbjct: 284 EVHKGIAQMFEVIEHARMMV----GTKAISTLSTGYLNALDYAKER-VQGADMTQMTDKS 338

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IM 396
                +   P ++R++           A+    A+  D A ++    A A        ++
Sbjct: 339 APRVTITHHPDVRRSLMTQKAYAEGLRAIYLYTASHQDVAAAQIVSGADASMAHRVNDLL 398

Query: 397 APITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            PI K    + A A +  E+++ +GGSG++++  I ++ R+S  +S+  G+
Sbjct: 399 LPIVKGVGSERAYANLGHESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGT 449


>gi|306843953|ref|ZP_07476548.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306275708|gb|EFM57432.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 394

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+           +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVPEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|169796334|ref|YP_001714127.1| putative Acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184157731|ref|YP_001846070.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213156930|ref|YP_002318975.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483795|ref|YP_002326020.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii
           AB307-0294]
 gi|301347073|ref|ZP_07227814.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511209|ref|ZP_07236446.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595039|ref|ZP_07240047.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332852010|ref|ZP_08433877.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332871763|ref|ZP_08440203.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332876414|ref|ZP_08444183.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|169149261|emb|CAM87144.1| conserved hypothetical protein; putative Acyl-CoA dehydrogenase
           [Acinetobacter baumannii AYE]
 gi|183209325|gb|ACC56723.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193077045|gb|ABO11804.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
 gi|213056090|gb|ACJ40992.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988222|gb|ACJ58521.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii
           AB307-0294]
 gi|322508038|gb|ADX03492.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517624|gb|ADX92005.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729587|gb|EGJ60925.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332731233|gb|EGJ62531.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332735424|gb|EGJ66482.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 390

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G    +K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|118466999|ref|YP_880344.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118168286|gb|ABK69183.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 16/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  
Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +       ++    +  +A+  A     W       V  +A++  GG GY+ E  + R Y
Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     + +G G   +L  L+
Sbjct: 355 RD--MRILGIGGGTTEILTALS 374


>gi|149279058|ref|ZP_01885192.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149230337|gb|EDM35722.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 596

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 56/280 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 150 LTEPNSGSDANSGKTKAKLADDGQHYLITGQKMWITNGGFADIFIVFAKIDDDANLTAFI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 210 VERGF-----GGITMNPEEHKMGIKGSSTRQVFFNDCPVPVKNMLSDRQNGFKIAVNILN 264

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA----- 358
           +           I L +A +  S  +  +  AI+YA  R     +  D+P+ K       
Sbjct: 265 IGR---------IKLAAAAIGAS--KSVIDTAINYANER-----LQFDRPISKYGAIRYK 308

Query: 359 IADIALDIAAATALSFRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCK 406
           +A++A  + A  + ++R   + D+A            K++ +      +   I K W  +
Sbjct: 309 LAEMAAKVYAVESANYRAGQNIDDAYDALVAAGMDASKAKLKSTEQFAVECAILKVWGSE 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +   V+ E ++  GG G+  E  + R YR++  N I  G+
Sbjct: 369 VLDYVVDEGVQIYGGMGFSAEAPMDRAYRDARINRIFEGT 408


>gi|145589003|ref|YP_001155600.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047409|gb|ABP34036.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 392

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 24/263 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D   + ++ +K+  G + L+G K W  +
Sbjct: 114 FGTEAQKQKYLPKLASGEWIGCFGLTEPNYGSDAGGMITRAKKVPGG-FSLTGSKMWISN 172

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +P++D F++ A+  EG +  +++ + ++     GL   ++  K+G R++ T E+     F
Sbjct: 173 APIADVFVVWAKNDEGIIRGYILEKGMK-----GLSAPKISGKLGLRASITGEIVMDEVF 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
              + D N              L+SA   +S   +  AE     A  Y   R   G  L 
Sbjct: 228 ---VPDENEFPEVTGLKGPFTCLNSARYGISWGALGAAEWCWHAARQYTLDRKQFGKPLA 284

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +AD+  +IA       RL    DE  +  E       +  I K   C  +  
Sbjct: 285 ANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGIAAPE-------ITSIMKRNSCGKSLD 337

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +   A +  GG+G  +E  +ARH
Sbjct: 338 IARMARDMHGGNGISDEYGVARH 360


>gi|126445155|ref|YP_001063921.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126458589|ref|YP_001076804.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|167725021|ref|ZP_02408257.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167829505|ref|ZP_02460976.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850987|ref|ZP_02476495.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|217422006|ref|ZP_03453509.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226196934|ref|ZP_03792512.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237510333|ref|ZP_04523048.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia
           pseudomallei MSHR346]
 gi|242311315|ref|ZP_04810332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254184581|ref|ZP_04891170.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254193879|ref|ZP_04900311.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|126224646|gb|ABN88151.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126232357|gb|ABN95770.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|169650630|gb|EDS83323.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184215173|gb|EDU12154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|217394237|gb|EEC34256.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225930917|gb|EEH26926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|235002538|gb|EEP51962.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia
           pseudomallei MSHR346]
 gi|242134554|gb|EES20957.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 383

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR++   SI  G+   M+
Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370


>gi|183984502|ref|YP_001852793.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M]
 gi|183177828|gb|ACC42938.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 24/265 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  + ++G K +++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-FIVNGAKTYITSGVRADFVVTAVRTGGPGAGGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFVVSRKLDKMGWRSSDTAELSYTDARVPAANLVGAENSGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIA---AAT 370
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  +D+A   + +
Sbjct: 242 ERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRS 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  I
Sbjct: 302 VVERQLAGEHDLIP----QVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEI 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
            R YR+     + +G G   +L  L
Sbjct: 351 ERQYRD--MRILGIGGGTTEILTAL 373


>gi|83648391|ref|YP_436826.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636434|gb|ABC32401.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 129/312 (41%), Gaps = 45/312 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +      +  S E      AP  +  +   +G++E   G+D+A + +  +K  D 
Sbjct: 93  MCTPAI-----ARFGSHELKSEFLAPAIRGEMIGCIGVSETSAGSDVAGLKTSARKDGDD 147

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            Y ++G K W  +SP +D   +LA              +VP  L      G+      +K
Sbjct: 148 -YVINGSKMWITNSPQADFMCLLANTSDDKPHKNKTLMVVPMNLP-----GIEVAPHLDK 201

Query: 279 IGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +G RS+ T ++ F +              GF++  +       E M        A  ++ 
Sbjct: 202 LGMRSSETAQVFFDDVRIPQRYRIGAEGMGFMMQMVQFQE---ERMW------GAANTIK 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +   + + I Y R R   G  LID   +   +A++  +I A  AL+++    + + K  
Sbjct: 253 ALEACVNQTIAYCRERKTFGQPLIDNQYIHFRMAELQTEIEALRALTYQACELYIQGKDV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ A+ A++ A        ++   V    ++  GG GY+ +  ++R +R+    SI  G+
Sbjct: 313 TQLASMAKLKAG-------RLGREVTDSCLQYWGGMGYMWDNPVSRAFRDVRLVSIGGGA 365

Query: 447 GNAMVLDVLNLL 458
              M+  +  L+
Sbjct: 366 DEIMLGIICKLM 377


>gi|115524393|ref|YP_781304.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518340|gb|ABJ06324.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 24/267 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++   + DG  Y L+G K F+S   ++   ++    G  G   +  
Sbjct: 125 LTEPGSGSDAAALRTRA--VIDGDHYVLNGQKQFISGAGANDLYVVMVRTGAEGAGGIST 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+ +    GL +   + K+G  +  T  + F +        LGD  +        KI + 
Sbjct: 183 LVVERDTPGLSFGANERKMGWNAQPTRAVMFEDARVPVQNRLGDEGIG------FKIAMA 236

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + +L +++ Y R R   G  L +   ++  +AD+A ++ AA  
Sbjct: 237 GLDGGRLNIAACSLGGAQSALDKSLDYTRERKAFGRRLDEFQALQFKLADMATELEAART 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             +R A + D           A ++  + K +   +   V  +A++  GG GY+ E  I 
Sbjct: 297 FVWRAAAALDRKDHD------ASMLCAMAKRFGTDIGFQVANDALQLHGGYGYLAEYGIE 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           +  R+   + IL G+   M + V   L
Sbjct: 351 KIVRDLRVHQILEGTNEIMRMIVARKL 377


>gi|254776056|ref|ZP_05217572.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 386

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 48/317 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + +  ++AL T  +  + W PK  + E             +   + +TE   G
Sbjct: 93  GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------LITAIAMTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+ +   
Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLVVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313
            G    R  +KIG  +  T EL F++               F +L+ +L     P E + 
Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFTDVHVPAENLLGQEGMGFIYLMQNL-----PQERIS 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I      A+M+ + M   L + + Y + R   G  +      +  +A++A +      + 
Sbjct: 253 I------AVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSRFVLAELATEATVVRMMV 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   + K  +E AA A       K++  +    +I   ++  GG GY+ E  +AR 
Sbjct: 307 DEFVRLHLDHKLTAELAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYPVARA 359

Query: 434 YRESPANSILLGSGNAM 450
           Y ++   +I  G+   M
Sbjct: 360 YLDARVQTIYGGTTEIM 376


>gi|17230170|ref|NP_486718.1| hypothetical protein alr2678 [Nostoc sp. PCC 7120]
 gi|17131771|dbj|BAB74377.1| alr2678 [Nostoc sp. PCC 7120]
          Length = 1206

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 148/351 (42%), Gaps = 39/351 (11%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
              LTE   G +  AI SQ     DG + L G K W  S+  +    +  + +  +  F+V
Sbjct: 693  FALTETGAGANPQAIQSQAISDGDG-WLLRGEKIWSGSAAWAGVINVFVKHQQGISGFVV 751

Query: 259  PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELE-FSNTFGFLLGDLNVSTGPVEDMKIL 315
             R    GSP GL        +G R     TV LE    T   +LG++       +D  + 
Sbjct: 752  RR----GSP-GLRQGAEALTMGMRGMVQNTVYLEDIPVTSAQVLGEVGKGMNVAQDAMMY 806

Query: 316  IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              L  A   V GM+  +     Y++RR ++ G L+D P++   + ++   I    +L  R
Sbjct: 807  GRLAIASACVGGMQRCVQLMWRYSQRRQIATGKLLDHPIVLHRLQELTCAITVVQSLVMR 866

Query: 376  LANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGYIEERSI 430
            +    D  ++            P   Y  CK+ AP    +A    ++ +GG GYIE    
Sbjct: 867  VGKLLDAGET-----------VPAEVYAACKISAPEFYWQAADLLVQTLGGRGYIESNIA 915

Query: 431  ARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
             +  R++    I  G    +   +   +L++G    E L + L Q LG+   +V T LRD
Sbjct: 916  PQILRDARVLRIFEGPTETLCGFLGARVLKQG----ETLQNFLCQTLGAV--EVGTRLRD 969

Query: 490  SISLCK------EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            ++   +       +  + R++  ++   ++ A L+    +  A  ++++RF
Sbjct: 970  AVDKIRGRCFDGANITVQRWVYHQVGKLATEAILWAVLDDKSAINWVKHRF 1020


>gi|332521398|ref|ZP_08397854.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332043126|gb|EGI79324.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y ++G K W  S   +D ++++AQ +   G   +  
Sbjct: 125 LSEPEAGSDATSQRTTAEDKGDH-YIINGTKNWITSGGRADVYLVIAQTDKEKGHKGINA 183

Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIY 317
            ++E G+P G      ++K+G R + T  L+F+        D+ V   P E+   +    
Sbjct: 184 FIVEKGTP-GFDVGPKEDKLGIRGSDTHTLQFN--------DVKV---PKENRIGEDGFG 231

Query: 318 LDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              A+ ++SG R+ +A             A+ Y++ R   G  + +   +   +AD+  D
Sbjct: 232 FKFAMKTLSGGRIGIAAQALGIASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYTD 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I+AA  L  + A   D+  +    +A A++       +  K+A     EA++  GG+G++
Sbjct: 292 ISAARHLVMKAAWDKDQGNNYDMSSAMAKL-------YASKVAMEHTVEAVQIHGGNGFV 344

Query: 426 EERSIARHYRESPANSILLGS 446
           +E  + R  R++    I  G+
Sbjct: 345 KEYHVERLMRDAKITQIYEGT 365


>gi|293608452|ref|ZP_06690755.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829025|gb|EFF87387.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 390

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G     K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|269216717|ref|ZP_06160571.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129862|gb|EEZ60945.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 387

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 125/288 (43%), Gaps = 32/288 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S ++D           +   L ++E  GG+D   + +    + DG   L+G K F+++  
Sbjct: 103 SSQFDMVRDRYASDGRLMFALAISEPEGGSDAMGMKTTVATV-DGRLILNGRKTFVNNGE 161

Query: 240 SDAFIMLAQVEGRV--------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              ++++A ++G +          +L+P  LE     G+    +K     ++  ++ L F
Sbjct: 162 YAPYLLIAAIDGDLEPVKHPPLSLWLLPHGLE-----GISVYPIK-----KAGQSI-LPF 210

Query: 292 SNTF--GFLLGDLNVSTGPVEDM-KILIYLD-----SAIMSVSGMRVSLAEAIHYARRRH 343
           S+      +L +    TG      ++  + D     S   ++   R ++ +A+ YA +R 
Sbjct: 211 SDVIMENVVLDESYRLTGSEPGFPQLFRFFDIGRIFSCATALGLARAAMEDAVAYASKRQ 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +ID  ++++ + D+ +D+ A     +R A   D      E    +R+   + K +
Sbjct: 271 AFGADIIDFQMIQQMLVDMEIDVRAMRDSVYRTAREADRHGHTRE----SRLSIALMKRF 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             + A  V + AM+ +GG GYI +  ++  +R+     I  G+   MV
Sbjct: 327 VPETATKVASNAMQILGGRGYINDERVSMIWRDCRGFQIAEGTDQIMV 374


>gi|260555403|ref|ZP_05827624.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411945|gb|EEX05242.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 390

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKDMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G    +K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|254514139|ref|ZP_05126200.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676382|gb|EED32747.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 382

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 31/286 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + W PK+ S E              A G L +TE   G+D+  I +   +  D  + L+G
Sbjct: 110 QQWLPKMVSGE--------------AFGALAMTEPGAGSDVQGIRTSAVRDGDE-WILNG 154

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++ + +D  ++ A  +   G       L D +  G    R   KIG  ++ T +L
Sbjct: 155 SKIFITNGIHADIVVVAAITDPGKGAKGTSLFLVDTTLEGFEKSRKIEKIGQHTSDTAQL 214

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F +       LLG+ N   G V  M+ L    L  A  +V     +L   + Y + R  
Sbjct: 215 FFQDVRLPANALLGEEN--RGFVIMMEELPRERLGIAAQAVGAAEGALDITVDYVKERKA 272

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +    +  +AD+   I    AL  + A+ + +    +++AA       + K   
Sbjct: 273 FGQSIGEFQNTRFKLADVKTQIGLNRALYEQCADEYAQGTLTADKAA-------MLKLAS 325

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           C+M  + I + ++  GG GY  E  I+R Y ++    I  GS   M
Sbjct: 326 CEMQCSTIDDCLQLFGGYGYTVEYPISRFYTDARIQRIYGGSSEIM 371


>gi|167572276|ref|ZP_02365150.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis C6786]
          Length = 1282

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 15/267 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+++ AI S  Q+I    + +SG K W  SS  +    + A+     G  ++  
Sbjct: 752  LTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMIGL 809

Query: 261  LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R      L       +    LG L       +       
Sbjct: 810  AVRQGTP-GLRIGAEDLTMGVRGMIQNALHLDRARVSDACRLGALGQGMAVAQQTMNFAR 868

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V GM+   A+ +H Y  RR +  G+L+D P+ ++ + D+   I    AL  +L
Sbjct: 869  LGIGAVCVGGMK-RCAQLMHRYGARRQIGTGLLLDNPLSRQRLGDLRHRIDGLNALIEQL 927

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+         I K    +       E M+ +GG GYIE     + +R+
Sbjct: 928  AADFDAGRDAPEDGLL------IAKILGSEFLSQSSDELMQMLGGRGYIETNLAPQIFRD 981

Query: 437  SPANSILLGSGNAMVLDVLNLLEKGTN 463
            +    I  G    ++  + + L  G++
Sbjct: 982  ARLPRIFEGPTETLLAHLGSRLLNGSD 1008


>gi|56459977|ref|YP_155258.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
 gi|56178987|gb|AAV81709.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  +D  +++A+   +G  G   F
Sbjct: 124 LTEPGSGSDAASLRTSAKKDGDE-YVLNGSKMFISGAGETDVLVVMARTGEDGPKGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
            VP         G+ Y + ++K+G  +  T  + F +              GF    + +
Sbjct: 183 AVP-----ADAKGVIYGKAEDKMGWNAQPTRLVTFEDVRIPAENLLGKEGEGFKFAMMGL 237

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G +         + A+ SV   + +L  A  Y + R   G  L     ++  +AD+A 
Sbjct: 238 DGGRI---------NIAVCSVGTAQAALNTAKAYMQERTQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A+  D   + +++  Y      + K +   +   V  +A++  GG GY
Sbjct: 289 ELVAARQMVRLAASKVD--NNDADKTTYC----AMAKQFATDVGFKVCNDALQLHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           I+E  + RH R+   + IL G+   M
Sbjct: 343 IKEYPLERHVRDVRVHQILEGTNEVM 368


>gi|172064812|ref|YP_001815524.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
 gi|171997054|gb|ACB67971.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
          Length = 1272

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 21/272 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255
             +TE   G+ + AI S+ Q+   G + ++G+K W  SS  +   + F   A   G VG 
Sbjct: 734 FAITEPAAGSHVRAIASRAQRTGSGDWLVTGNKRWSGSSAWAGIINVFARQADGTGMVGL 793

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
            + P     G+P G+     +  +G R      L       +  + LGD+       +  
Sbjct: 794 AVRP-----GTP-GVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMLVAQHA 847

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +  L  A + V GM+   A+ +H Y  RR V  G+L+D P+ +  + ++   I    A
Sbjct: 848 MNIARLGIAAVCVGGMK-RCAQLMHRYGGRRQVGTGLLLDNPLSRLRLGELRDRIDGLNA 906

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L   LA   D   +  E+         I+K    ++      E M+ +GG GYIE     
Sbjct: 907 LVEHLATELDLGVALPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAP 960

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + +R++    I  G    +++ + + L  G++
Sbjct: 961 QIFRDARLTRIFEGPTETLLVHLGSRLLNGSD 992


>gi|84501856|ref|ZP_01000014.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389851|gb|EAQ02485.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 399

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%)

Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           LGLTE   G+D + ++ +   K  D  Y L+G K ++++ P++D  ++ A+     G   
Sbjct: 134 LGLTEPGAGSDALGSMRTTATKDGDD-YILNGAKIYITNGPIADLVLVYAKTAPEKGAKG 192

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E  +P     Q+L NK+G R + T EL F +     G ++G L+   G V    
Sbjct: 193 ISAFIVETDTPGFKVAQKL-NKMGFRGSPTGELVFEDCRVPAGNMVGKLD---GGVAVTM 248

Query: 314 ILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + L+ AI+  + M ++   L  +I YA+ R   G  +    +++  +AD+   I AA 
Sbjct: 249 SGLDLERAIVCFNAMGIAQRALDISIDYAKTRQQFGKPIASFQMVQAMLADMYTQIEAAR 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +LS R A   +  +           +     Y   +    V+ +A++  GGSGY+ +  +
Sbjct: 309 SLSLRTAAMCEGLEEGEGGRGEIHKLTAAAIYKAAEATSFVLDKAVQIHGGSGYMRDTEV 368

Query: 431 ARHYR 435
            R YR
Sbjct: 369 NRLYR 373


>gi|262371413|ref|ZP_06064730.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii
           SH046]
 gi|262313635|gb|EEY94685.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii
           SH046]
          Length = 379

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 49/293 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q     D  Y + G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEADAGSDLQAIRTQAIPNQDH-YLVDGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+         +  LL D S NG+   R   KIG  +  T EL F 
Sbjct: 155 FISNGIHADLIVLVAKTNPEARAKGISLLLVDASLNGVEKGRSLKKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                           F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 QVKVPKNQRLGEEGQGFSYLMQEL-----PRERLSI------SMMALGSILGAIELTSDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMA 397
            ++R   G  L      +  +A+  +   AA A   + A  +  +A S S  AA   +  
Sbjct: 264 VQQRKAFGQPLSHMQNTRFVLANSQIKAKAAQAFVDQCAEQYSRDALSVSHVAA---LKC 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 321 FITDTQC-----DVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|264681456|ref|NP_001161107.1| isovaleryl-CoA dehydrogenase, mitochondrial [Sus scrofa]
 gi|262204892|dbj|BAI48026.1| isovaleryl Coenzyme A dehydrogenase [Sus scrofa]
          Length = 426

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  +  K  D  Y L+G
Sbjct: 150 EKYLPKLISGEY--------------IGALAMSETNAGSDVVSMKLKADKKGD-YYVLNG 194

Query: 231 HK-WFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  ++ A+ +         +  F+V    E G P G    +  +K+G R
Sbjct: 195 NKFWITNGPDADVLVVYAKTDLAAVPPSRGITAFIV----EKGMP-GFSTSKKLDKLGMR 249

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336
            + T EL F +     +  +N+     + + +L+  LD   + ++G     M+  L   I
Sbjct: 250 GSNTCELIFEDC---KVPAVNILGQLSKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTI 306

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE     ++ A   + 
Sbjct: 307 PYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTPKDCAGVVL- 365

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C+GG+GYI +  + R  R++    I  G+G + V
Sbjct: 366 ------YSAECATKVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412


>gi|284035996|ref|YP_003385926.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283815289|gb|ADB37127.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 606

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/342 (18%), Positives = 147/342 (42%), Gaps = 59/342 (17%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A ++    +P + + + P + +  +  T             + LTE + G+ ++ +T+ 
Sbjct: 132 AAHLITSFGSPELSETYVPNMLAGTWQGT-------------MALTEPQAGSSLSDVTTS 178

Query: 218 GQKISD-----GIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR------VGCFLVPRL 261
              + D     G Y + G K F+S+   DA      +MLA+++G       +  F+VP+ 
Sbjct: 179 ATPLPDDQFGPGAYKIKGQKVFISAGDHDAVENIVHLMLARIDGAPKGTKGISLFVVPKY 238

Query: 262 LEDGS----PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVE 310
             DG+     N +    + +K+G +    + L      +T G+++G     L      + 
Sbjct: 239 RPDGNGGFVDNDVTSTGVYHKMGQKGVPAMHLTMGTNDDTIGYIVGQPHQGLPYMFQMMN 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--------------VMK 356
           + +I + + +A ++ +    +L  A    + R ++   L+D P              + +
Sbjct: 299 EARIGVGMTAAAIATAAYHAALEYAKERPQSRRLNQKNLLDAPQTPIINHPDVRRMLLFQ 358

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAE 414
           +A+ + +L +    A   RL +  + A+   +E A+    ++ P+ K +  +M    +++
Sbjct: 359 KAVTEGSLSLLIEAA---RLYDISEVAEGGEKENAFLLLDLLMPVAKSYPSEMGVQSVSQ 415

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +++  GG G+ E+  + + YR+     I  G+      D+L 
Sbjct: 416 SLQTFGGYGFTEDFPVEQLYRDIRITPIYEGTTGIQAQDLLG 457


>gi|119504493|ref|ZP_01626572.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459515|gb|EAW40611.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 400

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 28/254 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D   +T++ + + DG Y +SG K W  +SP++D F++ A
Sbjct: 134 PKLATGEWIGCFGLTEPDHGSDPGGMTTRAKSV-DGGYRVSGAKMWISNSPIADVFVVWA 192

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + +  V   +   +LE G   GL   +++ K+  R++ T E+     F     LL ++  
Sbjct: 193 KTDDDV---IRGFILEKGM-EGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVRG 248

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAI 359
             GP         L++A   ++   +  AE   H AR+    R   G  L    +++  +
Sbjct: 249 LKGP------FGCLNNARYGIAWGTLGAAETCWHTARQYTLDRQQFGRPLAANQLIQLKL 302

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  DI+ A    FR A     A + S +      +  + K   C  A  +  +A + +
Sbjct: 303 ADMQTDISLAMQGCFR-AGQMLSAGTISPD------LISLIKRNSCGKALEIARKARDML 355

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  I RH
Sbjct: 356 GGNGISDEYPIMRH 369


>gi|254497542|ref|ZP_05110334.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254353259|gb|EET12002.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 386

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 41/287 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++    Q   D  + L+G
Sbjct: 112 EKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLHAQASGD-TFILNG 156

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  + P +D  ++ A+ + +     +   L+E G P     Q+L +K+G R + T E
Sbjct: 157 TKMWITNGPDADVLVVYAKTDKQAASKGITAFLIEKGMPGFKTAQKL-DKLGMRGSNTCE 215

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDS-----AIMSVSGMRVSLAEAIHYA 339
           L F         +LG++N      + +K+L+  LD      A   V  M+  +   + Y 
Sbjct: 216 LVFEQCEVPAEQILGEIN------QGVKVLMSGLDYERTILAAGPVGIMQACMDVVLPYV 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R      + +   ++  +AD+  D++A+ A  + +A + D+     ++AA   +    
Sbjct: 270 HERKQFEQAIGEFQFIQGKLADMYTDLSASRAYLYTIAKACDQGLVSRKDAAGVIL---- 325

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +  + A  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 326 ---YTAEKATQMALQAIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 369


>gi|55378695|ref|YP_136545.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55231420|gb|AAV46839.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 387

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 20/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G++ +A+ +  ++ +DG Y L+G K W  ++P+SD  ++ A+V    G  + 
Sbjct: 128 FGLTEPEHGSNPSAMETTAERDADG-YVLNGSKTWITNAPISDLAVVWAKVTSADGDPVR 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIY 317
             L+E    +G+   ++  K+  R++ T E+   N     + + NV  G VE MK  L  
Sbjct: 187 GFLVET-DRDGVTTNKIDEKLSLRASITGEISLQNAH---VPEENVLPG-VEGMKGPLSC 241

Query: 318 LDSAIMSVSGMRVSLA----EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L  A   ++   V  A    E  H YA  R   G  +    + +  +A++A  I+    L
Sbjct: 242 LTQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLL 301

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA+  +    R E+ + A       K    +MA      A E +GG+G   + S  R
Sbjct: 302 AHRLADLKERGDLRPEQVSMA-------KRNNARMAREQSRVAREMLGGNGITADYSPMR 354

Query: 433 H 433
           H
Sbjct: 355 H 355


>gi|195160855|ref|XP_002021289.1| GL25250 [Drosophila persimilis]
 gi|198465055|ref|XP_001353478.2| GA17761 [Drosophila pseudoobscura pseudoobscura]
 gi|194118402|gb|EDW40445.1| GL25250 [Drosophila persimilis]
 gi|198149996|gb|EAL30989.2| GA17761 [Drosophila pseudoobscura pseudoobscura]
          Length = 415

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 38/278 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 155 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T  L F N          TFG        + G
Sbjct: 213 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMLTFDNVRVPEENILGTFGH---GYKYAAG 269

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + +    V LA+      I Y   R   G  + +   M+  IA I
Sbjct: 270 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGESIYNFQSMQHQIATI 320

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I AA  +++  A   ++     +EAA A       K++  ++A     + ++ +GG 
Sbjct: 321 ATEIEAARLMTYNAARLQEQGVPFLKEAAMA-------KFYASEVAQRAAIKCIDWMGGV 373

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+  +    + YR+    +I  G+ N  +  +   ++K
Sbjct: 374 GFTRDFPQEKFYRDVKIGAIYEGTSNMQLSTIAKCVKK 411


>gi|15616048|ref|NP_244353.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176110|dbj|BAB07205.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 594

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 49/313 (15%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D FI+ A+++G     F+V
Sbjct: 150 LTEPSSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            +  E     G+     + K+G + ++T  L   +       LLG+  V  G V    IL
Sbjct: 210 EKDFE-----GVSTGPEEKKMGIKGSSTRTLILEDALVPKENLLGE--VGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368
                   +  + G +  +  A  YA  R         QP+ K       +A++A+   A
Sbjct: 263 NVGRYKLGVGCIGGSKRGIELAAKYANERK-----QFKQPIAKFTLIQEKLANMAVTTYA 317

Query: 369 ATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWC-CKMAPAVIAEAMECI----- 419
           A +  +R    F++     S  ++     +   I +Y   C +   V +EA++ +     
Sbjct: 318 AESSIYRTGGLFEDRLGGLSEEQQKDGREVAKAIAEYAIECSLNKVVGSEALDFVADEAV 377

Query: 420 ---GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464
              GG G++ E  + R YR+S  N I  G+     L V            L  LEK T L
Sbjct: 378 QIHGGYGFMAEYEVERMYRDSRINRIFEGTNEINRLLVPGTILRKAMKGELPFLEKATAL 437

Query: 465 FEQLFSTLEQDLG 477
            E+L   + Q++G
Sbjct: 438 QEELMMLMPQEVG 450


>gi|330897773|gb|EGH29192.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 383

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARGAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I AA  L+   A      ++   EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|330811602|ref|YP_004356064.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379710|gb|AEA71060.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 378

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 46/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-- 255
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298
              FLV    E G+P     +RL+ K+G ++  T EL F +               F +L
Sbjct: 182 TSLFLV----EAGTPGFEKGKRLE-KVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYL 236

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           + +L     P E + +      AI  ++    +L   + Y R R   G  + D    +  
Sbjct: 237 MQEL-----PQERLTV------AIGGLASAEAALQWTLDYTRERKAFGKSIADFQNTRFK 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A +I        R      + K     AA A       KYW   +   V+ E ++ 
Sbjct: 286 LAEMATEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQL 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG G++ E  IAR + ++    I  G+   M
Sbjct: 339 HGGYGFMWEYPIARAWADARVQRIYAGTNEIM 370


>gi|240169351|ref|ZP_04748010.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 382

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 14/260 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 -RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             ++E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LVVVEKGTP-GFEVSRKLDKMGWRSSDTAELSYTDVRVPAANLVGGENTGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  
Sbjct: 242 ERIGLAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQAVQNTLAEMARRIDVARVYSRH 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +     E +   E    A++     K    +    V  +A++  GG GY+ E  + R YR
Sbjct: 302 VV----ERQLAGETNLIAQVC--FAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVL 455
           +     + +G G   +L  L
Sbjct: 356 D--MRILGIGGGTTEILTAL 373


>gi|168186941|ref|ZP_02621576.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
 gi|169295176|gb|EDS77309.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
          Length = 379

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F++ SP+++ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDRSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G+   ++++K+G R     E+   +       LLG      G    MK  
Sbjct: 182 SAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIA--MKT- 238

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + V+   + LAE     A  Y + R   G  L     +   +AD+ + I  + 
Sbjct: 239 --LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A   +     S  AA A++        C   A  V  EA++  GG GYI++  +
Sbjct: 297 YLLYQAAMDKNNGNPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYPV 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 350 ERMMRDAKITQIYEGT 365


>gi|47522686|ref|NP_999063.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Sus scrofa]
 gi|13878316|sp|P79273|ACADS_PIG RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|1695727|dbj|BAA13964.1| short-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 413

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 29/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A  +  Q   D  + LSG K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAAATTAQADHDS-WVLSGTKAWITNAWEASAAVVFASTDRSLQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R+++T  L F +     +   N+   P    K
Sbjct: 211 SAFLVPM-----PTAGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262

Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +++A     ++YA  R   G  L     ++  +AD+AL + 
Sbjct: 263 IAMKTLDMGRIGIASKALGISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALE 322

Query: 368 AATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +A  L++R A   D  K+   +E A A++ A        + A A+  +A++ +GG GY+ 
Sbjct: 323 SARLLTWRAAMLKDNKKNPFIKEPAMAKLAA-------SEAATAITHQAIQILGGMGYVT 375

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 376 EMPAERHYRDARITEIYEGT 395


>gi|295400653|ref|ZP_06810630.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977234|gb|EFG52835.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 379

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 50/297 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223
           T    K + PK+ S EY                LG   LTE   G+D  ++ ++  +  D
Sbjct: 102 TEEQKKKYVPKLASGEY----------------LGAFCLTEPGAGSDAKSLKTKAVRQGD 145

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             Y L+G K F+++   +D +I+ A+     +G  G  +   ++E G+P G    + + K
Sbjct: 146 -YYILNGSKIFITNGGEADTYIVFARTAPNEKGSRG--ISAFIVEKGTP-GFIIGKDEKK 201

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE 334
           +G   + TV++ F +       LLG+        +  KI +  LDS  + ++   + +AE
Sbjct: 202 MGLHGSRTVQIMFEDAKVPAENLLGEEG------QGFKIAMANLDSGRIGIAAQSLGIAE 255

Query: 335 A-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A       YA+ R   G  + +Q  +   +AD+A  + AA  L +  A    +     +E
Sbjct: 256 AALEHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCGKE 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           AA A++ A  T      M  A+  EA++  GG+GY ++  + R +R++    I  G+
Sbjct: 316 AAMAKLFASRT-----AMENAI--EAVQIFGGNGYTKDYPVERLFRDAKICEIYEGT 365


>gi|257454746|ref|ZP_05620000.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60]
 gi|257447866|gb|EEV22855.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60]
          Length = 391

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +    G+Y L+G K W  + P +D  ++ A+    +G   +
Sbjct: 127 LAMSEPGAGSDVTSMKLRAED-KGGVYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T E+ F N       +LG LN        +K+L
Sbjct: 186 TAFLVEKGMKGFYTAQKLDKLGMRGSHTGEMVFDNVEVPSDNILGGLN------NGVKVL 239

Query: 316 IY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     ++   + L +A+      Y   R   G  + +  +++  +AD+   + A 
Sbjct: 240 MSGLDYERAVLAAGPIGLMQAVMDNVTPYIHDRKQFGQAIGEFQLIQGKVADMYTTLQAG 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + +  + D  +  S+     R        W  + A  +  E ++  GG+GY  E  
Sbjct: 300 RSFLYTVGKNLD--RLGSDHVRQVRKDCASVILWTAEKATWMAGEGIQIFGGNGYTNEYP 357

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 358 LGRIWRDAKLYEIGAGT 374


>gi|33600185|ref|NP_887745.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567783|emb|CAE31697.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 33/264 (12%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGR- 252
           A+   L+E+  G+D  A+ +  ++   G + + G K W  +   S  FI+ A+   EG+ 
Sbjct: 123 AVNFALSERGAGSDAGAVQATAEREGAG-WRIRGEKCWLGNGGHSHHFIVFARTGPEGQR 181

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--FLLGDLNVSTGP 308
             +  F+V R  E     G+     ++K+G R   T  L+         L+G+L      
Sbjct: 182 NNISAFVVAREAE-----GVAVDFYEDKMGIRGTTTTNLKLDTWVAEDALVGELG----- 231

Query: 309 VEDMKI---LIYLDSAIMSVSGMRVSL---AEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              +K+    + +   +++     ++L   AEA  +A  R   G  +ID   +   +AD 
Sbjct: 232 -HGLKLALATLTIGRVVVAAQANGIALCAYAEACDFAVSRETFGRSIIDHQGIGFKLADA 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              ++++  + +  A ++D  +  S   A A+++A        +++  V+ +AM+ +GG 
Sbjct: 291 MTGLSSSRMMVYEAARAYDAGEDISTLGAMAKLLAS-------EVSHTVVDDAMQVLGGR 343

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY++  +  R YR+     I  G+
Sbjct: 344 GYVKPSAAERCYRDQRITEIYEGT 367


>gi|89095579|ref|ZP_01168473.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89089325|gb|EAR68432.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 376

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A     +G   V  
Sbjct: 124 LTEAGAGSDAGSLKTKAVRNGDE-YILNGSKVFITNGGEADVYIVFASTSPELGTKGVSA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            +     +GL   + + K+G   + TV+L F +     +   N+     E  KI +  LD
Sbjct: 183 FIVGKGTSGLVIGKDEEKMGLHGSRTVQLNFED---MRVPAENLLGAEGEGFKIAMANLD 239

Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++   + +AEA       Y++ R   G  +  Q  +   +AD+A ++ A+  L +
Sbjct: 240 AGRIGIAAQALGIAEAALEAAVAYSKERSQFGKPISHQQGIGFKLADMATNVEASRLLVY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  +A    +      + A + K +  K A     EA++  GG GY E+  + R++
Sbjct: 300 -------QAAMMRQNGERCGMQASMAKLFASKTAVETSIEAVQVFGGYGYTEDYPVERYF 352

Query: 435 RESPANSILLGS 446
           R+S    I  G+
Sbjct: 353 RDSKITEIYEGT 364


>gi|219670532|ref|YP_002460967.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219540792|gb|ACL22531.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 591

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 40/346 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +     ++G  Y L+G K F+++   +D F++ A+VEG++  F+V 
Sbjct: 148 LTEPGSGSDALGAKATAVLNAEGTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
           R +      GL +   + K+G + ++T ++   +       ++G+L    G V    IL 
Sbjct: 208 RTMP-----GLSFGPEEKKMGIKGSSTRQVILEDVAVPVENIVGELG--RGHVVAFNILN 260

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++   +++L   + YA  R   G  L     ++   A+IA     A ++ +
Sbjct: 261 VGRFKLAAAAIGSAQLALEVTLKYAAERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVY 320

Query: 375 RLANSFDEA--------KSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           R A   +EA          R E       YA I   + K    ++    + E ++  GG 
Sbjct: 321 RTAGLMEEACQDLDVTGDCRKEAGKAIEEYA-IECSLNKVLASEVLDLAVDEGVQIHGGY 379

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           G+I E  I R YR+S  N +  G+      ++  LL  GT L ++  S  E  L ++ K 
Sbjct: 380 GFIAEYPIERMYRDSRINRLFEGTN-----EINRLLVPGT-LLKRAMSG-ELPLLAAAKN 432

Query: 483 VITILRDSISLCKEDKGLARFLT-----EKIALASSAAALYRAGMN 523
           V   L  S  L  E++GLA  L      +K+ L ++  A    GM 
Sbjct: 433 VSKDLM-SAGLGSEEEGLAALLNMTQKAKKLCLMAAGIAAQNLGME 477


>gi|332662461|ref|YP_004445249.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331275|gb|AEE48376.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 604

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/394 (18%), Positives = 165/394 (41%), Gaps = 63/394 (15%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+ H + H  ++     GL  + +   +  +   +   I AA  ++M       +M   
Sbjct: 71  QVKVHSSIHEFIKTFSEAGLMSAPFSEEWGGIQLPKV--IAAAAEFIMGSAHNSMVMYTD 128

Query: 156 VT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  +A+++     P     + PK+ S E+  T             + LTE + G+ ++ 
Sbjct: 129 LTKGAANLIYTFGNPEQKAAFLPKMLSGEWMGT-------------MCLTEVQAGSSLSD 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--R 260
           + +     +DG Y + G K F+S+   D       ++LA+++G       +  F+VP  R
Sbjct: 176 VATAASPQADGTYLIKGQKIFISAGDQDVTDNIVHLVLARIDGAPKGTKGISLFIVPKKR 235

Query: 261 LLEDGS--PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKIL 315
           +   G+  PN +    + +K+G ++   + LEF   ++  G+LLG++N         ++ 
Sbjct: 236 INSAGTLEPNDVDSIGIYHKMGQKATPAMHLEFGGKNDCVGYLLGEINRGLP-----QMF 290

Query: 316 IYLDSAIMSV--SGMRVSLAEAIHY---------ARRRHVSGGI-----LIDQPVMKRAI 359
           + +++A + V   G+ ++ A               RR +    +     +I  P ++R +
Sbjct: 291 LMMNAARLGVGMGGIHIASAAYYAALQYAQERPQGRRLNEKQALVEPVCIIQHPDVRRML 350

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPITKYWCCKMAPAVI 412
                 +    +L  +     D  K  +++    +       ++ P+ K +  +M    +
Sbjct: 351 FLQKAIVEGGLSLILQCYQYLDLEKVHADQPEVKQHYNQLLELLTPVAKTYGAEMGFVAV 410

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + ++ +GG GY E+  + +  R+    S+  G+
Sbjct: 411 NQGLQVLGGYGYTEDFPLEQLARDVRIMSLYEGT 444


>gi|332524728|ref|ZP_08400926.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
 gi|332108035|gb|EGJ09259.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
          Length = 392

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 112/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +     D  Y L+G K W  + P +D  ++ A+ E  +G   V
Sbjct: 128 LAMSEPGAGSDVLSMKLRAVPRGDA-YVLNGSKMWITNGPDADTLVVYAKTEPELGGRGV 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG++N   G    M  L
Sbjct: 187 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPAENVLGEVN--GGAKVLMSGL 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   +  M+  + E + Y   R   G  + +  +++  +AD+   + A  + 
Sbjct: 245 DY-ERAVLAAGPIGIMQAVMDEVVPYVHERRQFGRSIGEFQLIQAKLADMYTVLQAGRSF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D   +           + I   WC + A  +  E ++  GG+GYI +  + R
Sbjct: 304 CYTIGKNLDALGTGHVRRVRKDCASVI--LWCAEKATWMAGEGIQIFGGNGYINDYPLGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 LWRDAKLYEIGAGT 375


>gi|325121814|gb|ADY81337.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G     K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQSLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|297623950|ref|YP_003705384.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165130|gb|ADI14841.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 397

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 30/261 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GR--- 252
           GLTE   G+D A + ++ +   D  + +SG K F++   +   +++LA+ +    G+   
Sbjct: 135 GLTEPGSGSDAAGMRTRAEDRGDH-FVISGSKIFITQGTVGGTYVILARTDDPRPGKSAA 193

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  F+VP     G   GL   + + K+G  ++ T  L F +        L V      
Sbjct: 194 DGISAFVVP-----GDAPGLVRGKPEEKLGLHASDTTPLTFEDLVVPAENLLGVRGEAFR 248

Query: 311 DMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           D  ++  LD   + +  M     R +L  A  YA  R   G  +     +   IA++A +
Sbjct: 249 D--VMAVLDGGRIGIGAMGIGLGRAALEIAAKYALEREQFGRPIAHNQGVSFKIAEMATE 306

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L  + A   D  +  +  AA A++   +     C         A++ +GG GYI
Sbjct: 307 LEAARLLVLKAAALKDAGRPFTMAAAQAKLKGSVAGVRACD-------HAIQILGGYGYI 359

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R +R++    I  G+
Sbjct: 360 REYEVERLWRDARLTRIGEGT 380


>gi|256827295|ref|YP_003151254.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
 gi|256583438|gb|ACU94572.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
          Length = 398

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 31/281 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-- 247
            Q  SV     +TE+ GGT  A I +  +K  DG + L+G KW +S +  SD   ++A  
Sbjct: 117 FQDKSVYCNFAITEQTGGTG-ADIHTTAEKQPDGSWILNGEKWLISHTDCSDYTYVIAVS 175

Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
               + + R+  FLVP    + +P G     + + +G R      L F+N      +LLG
Sbjct: 176 DPTKEKDDRLSAFLVP----NDAP-GFEIVEMPHMMGCRGAGHAGLRFTNVKLEPKYLLG 230

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                + V+   +   ++ I + +  M+   + +SL      A  R   G  +  + ++K
Sbjct: 231 KEGQGMEVAIHSLSVSRVHIAMSNLGMAQRMLELSLKR----ANDRITFGKPIATRQMIK 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + I       +  A  +D          Y    A I K +       V  E +
Sbjct: 287 AKIADMQMMIHVLRTAIYDFARDYDIDPKND----YITEKAAICKLFSIDTVKRVSDEML 342

Query: 417 ECIGGSGYIEERSIA---RHYRESPANSILLGSGNAMVLDV 454
           E  GG GY E+       R YR+  A  +  G+ N   + +
Sbjct: 343 EIFGGDGYFEDSPYGPTERLYRDCRAMWLEEGAPNVQRITI 383


>gi|195591382|ref|XP_002085420.1| GD12323 [Drosophila simulans]
 gi|194197429|gb|EDX11005.1| GD12323 [Drosophila simulans]
          Length = 420

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 46/285 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A +  R   F 
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFA-MPARGFSFF 210

Query: 258 -------VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLG 300
                  +   + D    GL   + ++K+G R++ T +L F N          TFG    
Sbjct: 211 KYNGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH--- 267

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
               + G         +L+   + ++   V LA+      I Y   R   G  + +   M
Sbjct: 268 GYKYAAG---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSM 318

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A     + 
Sbjct: 319 QHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKC 371

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 372 VDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 416


>gi|83718162|ref|YP_438493.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167614964|ref|ZP_02383599.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257141544|ref|ZP_05589806.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651987|gb|ABC36051.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----QVEGRV 253
           L +TE  GG+D+AA+  +   I DG  Y ++G K F++S +   +  +A        G  
Sbjct: 130 LAITEPGGGSDVAAL--RASAIRDGDHYVVNGEKVFITSGIRADYYTVAVRTDPHARGAK 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G  L   LL +G   GL    LK K+G  ++ T  L F +        +    G    + 
Sbjct: 188 GLSL---LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVM 243

Query: 314 ILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               L+   ++ S +   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  
Sbjct: 244 QNFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   + A   D A  R+  A  A I   + K +  +        A++ +GG GY+     
Sbjct: 304 AWLEQCAWQMDHADGRA-PALVATIC--MLKNFATQTMQFCADAAVQILGGMGYMRGTRP 360

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE   N I  G+   M
Sbjct: 361 ERIYREVKVNMIGGGAQEIM 380


>gi|78060297|ref|YP_366872.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964847|gb|ABB06228.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 21/271 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P   T   IG + +TE   G+D+ A+ +   +  D +Y ++G K F+++  +++  I++ 
Sbjct: 117 PRLATGELIGAIAMTEPGTGSDLQAVRTTAAREGD-LYRINGSKTFITNGQLANLVIVVC 175

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +    EG  G  L+  ++E    +G    R  +K+G  +  T EL F +       LLG 
Sbjct: 176 KTSKDEGAQGMSLL--VIETDQASGFRRGRNLDKLGMDAQDTSELFFDDVQVPVDNLLGG 233

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            N   G ++ M+ L    L  A+  ++ M +++ E + Y + R   G     +P+   + 
Sbjct: 234 -NEGMGFIQLMQELPQERLIVAVAGIAAMELAMQETLAYTKERQAFG-----KPIF--SF 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            +    +A   AL        D A             A + KYW       +I E ++  
Sbjct: 286 QNTRFKLAECQALLMASRALVDAAIVAHLNGELGVDRAALIKYWVTDNQCKLIDECLQFF 345

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY++E  IAR Y ++    I  G+   M
Sbjct: 346 GGYGYMKEYPIARLYADARVQRIYGGTNEIM 376


>gi|26990204|ref|NP_745629.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985147|gb|AAN69093.1|AE016543_2 acyl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%)

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           G +MS   SV    ++A  T  +  + W P++ S E               IG   LTE 
Sbjct: 85  GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G      FLVP
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312
                 +P G    R ++K+G R++ T  + F N       +LG+    L ++   +E  
Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L
Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  + R
Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352

Query: 433 HYRESPANSILLGS 446
           +YR++    I  GS
Sbjct: 353 YYRDARITQIYEGS 366


>gi|294507759|ref|YP_003571817.1| acyl-CoA dehydrogenase [Salinibacter ruber M8]
 gi|294344087|emb|CBH24865.1| acyl-CoA dehydrogenase [Salinibacter ruber M8]
          Length = 786

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 38/308 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------------Q 248
           L+E   G+D AA  S   K  DG Y L+G K W  S  MS    ++             +
Sbjct: 260 LSEPNVGSDAAAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELE 319

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G     + P +  DG      +++ + K G R        F++     + + NV    
Sbjct: 320 QQGVNALIVTPDM--DGVE---VFEKNRAKTGIRGTWQARFRFNDV---RVPEENVLHEE 371

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
              +K+ L  L+    ++S      A+A     I +A+ R+     L D  ++K+ IA +
Sbjct: 372 GAGLKVALSCLNYGRCTLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARM 431

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +    A  A+ + +    D+ +          +   ITK +C      VI EA++ +GG 
Sbjct: 432 SAVTYAMDAMLYMMTGLLDQGEDD------IMVETAITKVFCSDFGWNVIDEALQVMGGE 485

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLG 477
           GY+ E  + R +R++  + I+ GS   M   +       L EK  ++ E L    ++ +G
Sbjct: 486 GYMTEHELERAWRDNRIHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIG 545

Query: 478 SSGKKVIT 485
            +  +++T
Sbjct: 546 DNLSRILT 553


>gi|119478557|ref|ZP_01618500.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119448461|gb|EAW29710.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 114/249 (45%), Gaps = 30/249 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D +++ +  ++  D +Y L+G K +++ +P +  F ++A+ +  + G   + 
Sbjct: 124 LTEPDVGSDASSVKTSAKRDGD-VYILNGTKRYITNAPRAGTFTVMARTDPDKPGASGIT 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312
             + D + +G+   +   K+G    +T ++ F        N  G + G      G    M
Sbjct: 183 AFIVDANSDGITVGQSDKKMGQAGTSTSDVIFEDVKVPAKNVIGGVEG-----KGFYTSM 237

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           K+L   D   + ++ + V +AE     A+ +A  R   G  + +  +++  +AD   +  
Sbjct: 238 KVL---DRGRIHIAALSVGIAERLIKDALQFAIERKQFGKPIAEHQLIQAMLADSKTEAY 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    +   D  ++ + EA+         K +  +M   V   A++  GGSGY+ E
Sbjct: 295 AAKCMVMDASRQRDLGENITAEAS-------CCKLYATEMVGRVADRAVQIHGGSGYMAE 347

Query: 428 RSIARHYRE 436
            ++ R YR+
Sbjct: 348 YAVERFYRD 356


>gi|21230885|ref|NP_636802.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769116|ref|YP_243878.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992264|ref|YP_001904274.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112494|gb|AAM40726.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574448|gb|AAY49858.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734024|emb|CAP52230.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 24/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GL+E +GG+D AA+T++  +  DG        W  +  ++D  I+ A  +  V  FLV 
Sbjct: 133 FGLSEAQGGSDPAAMTTRAVRDGDGWRLRGAKMWITNGSIADLAIIWAHTDDGVRGFLV- 191

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312
               D    G   Q + +K+  R++ T  +   + F          LG L    G +   
Sbjct: 192 ----DTRSEGFRAQDIGHKMSLRASVTSAVFLDDVFVPEQQRLPDALG-LKAPLGCLSQA 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  I   +   +V+ +R    EA+ Y+  R + G  L      +  +AD+A  IA A  L
Sbjct: 247 RFGIAWGAIGAAVACLR----EALAYSGERILFGRPLAATQSAQIKLADMARRIATAQLL 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + +L    +    R E+ + A       K+  C+MA  V  E  + +G +G   E    R
Sbjct: 303 ALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIR 355

Query: 433 H 433
           H
Sbjct: 356 H 356


>gi|83953923|ref|ZP_00962644.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83841868|gb|EAP81037.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 37/281 (13%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++  + +K +D  Y LSG+K W  +
Sbjct: 106 NGSPEQKAKFLPGLCSGQHVGALAMSEPSAGSDVVSMKLRAEKRNDH-YRLSGNKYWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
            P +D  ++ A+ +   G   +   L + S  G       +K+G R + T EL F +   
Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEV 224

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350
            F  +LG+       +  M  L Y +  +++  G   M   L E + Y   R   G  + 
Sbjct: 225 PFENVLGEEGRGVAVL--MSGLDY-ERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC---- 405
           +  +M+  +AD+   + +A A  + +A + D    +R++ AA            CC    
Sbjct: 282 NFQLMQGKMADMYTAMNSARAYVYEVAKACDRGDVTRADAAA------------CCLYAS 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A     +A++ +GG+GY+ +  + R +R++    I  G+
Sbjct: 330 EEAMKQAHQAVQAMGGAGYLSDNPVGRIFRDAKLMEIGAGT 370


>gi|328470425|gb|EGF41336.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 389

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDANAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F+N       +LG LN     VE +   
Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  +AD+   ++AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 VYTVAAACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|327439092|dbj|BAK15457.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 594

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 41/328 (12%)

Query: 152 MSP----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKR 206
           MSP    S+T  + V + + P V       +F      T   P   +   I    LTE  
Sbjct: 102 MSPAGGFSITHGAHVGIGSLPIV-------LFGNHEQKTKYLPKLASGALIAAYALTEPG 154

Query: 207 GGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLE 263
            G+D + A T+     +   Y L+G K W  ++  +D F++ A+++G +   F+V R   
Sbjct: 155 SGSDALGAKTTAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGDKFTAFIVER--- 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--L 318
             S  G+     + K+G +S++T  L   +       LLG+  V  G +    IL     
Sbjct: 212 --SFPGVSVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGE--VGRGHIIAFNILNIGRY 267

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              + +V   + +   A+ Y  +R      L +  + K  IA +A  I A+ +L++R   
Sbjct: 268 KLGVGTVGASKRAFELAVAYTNQRQQFKTKLSNFNLTKEKIASMASHIYASESLNYRTVG 327

Query: 379 SFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            F+            + KS +   A   I   I K +  +    V  EA++  GG G++ 
Sbjct: 328 YFEDRLSQLSDEEQKDGKSIAAAIAEYAIECSIAKVFGSETLDFVADEAVQLHGGYGFMA 387

Query: 427 ERSIARHYRESPANSILLGSG--NAMVL 452
           E  + R YR+S  N I  G+   N M++
Sbjct: 388 EYEVERIYRDSRINRIFEGTNEINRMIV 415


>gi|90425736|ref|YP_534106.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107750|gb|ABD89787.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGSKMWITNGPVAETLVVYAKTDPTAGARGM 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +   NG    +  +K+G R + T EL F +       +LGD  V  G    M  L
Sbjct: 190 TAFIIEKGMNGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGD--VGRGVNVLMSGL 247

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++      M+  L   + Y   R   G  +    +++  +AD+ + + A+ A 
Sbjct: 248 DY-ERAVLAAGPLGIMQACLDVVMPYIHERKQFGQPIGLFQLVQGKVADMYVTLNASRAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  E++A A + A      C         +A++ +GG+GYI +    R
Sbjct: 307 VYAVAKACDRGETSREDSAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTGR 359

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 360 LLRDAKLYEI--GAGTSEIRRML----IGRELFEK 388


>gi|325286939|ref|YP_004262729.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324322393|gb|ADY29858.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 380

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 37/290 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
           W  + F  E           T  +IG   L+E   G+D  A + +   I  G  Y L+G 
Sbjct: 96  WGLETFGTEEQKQKYLTRLTTGESIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYVLNGT 153

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  +   +D ++++AQ +   G   +  L+ +    G      +NK+G R        
Sbjct: 154 KNWITNGSSADIYLVIAQTDIEKGHKGINALIVEKGAEGFEIGPKENKLGIRG------- 206

Query: 291 FSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AI 336
            S+T   +  D+ V   P E+   +       A+ ++SG R+ +A             A+
Sbjct: 207 -SDTHSLIFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAGAYELAL 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+++R   G  + +   +   +AD+   I AA  L ++ A   D  ++     A A++ 
Sbjct: 263 KYSKQRKAFGTEIANHQAIAFKLADMHTSIEAARMLVYKAAMDKDNHENYDLSGAMAKL- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +  K+A  V  EA++  GG+G++++  + R  R++    I  G+
Sbjct: 322 ------YASKVAMDVAVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGT 365


>gi|302525612|ref|ZP_07277954.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302434507|gb|EFL06323.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 16/268 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   +G + +TE   G+D+  I ++  +  D  Y ++G K F+++   SD  ++  
Sbjct: 115 PKMATGELVGAVAMTEPGTGSDLQNIKTRAVRDGDH-YVINGAKTFITNGFHSDLVVVAC 173

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +   G   V  ++ + +  G    R+ +K+G +   T EL F +       LLGD   
Sbjct: 174 KTDPDAGAQGVSLIVVETNTPGFRRGRVLDKVGLKGQDTAELFFDDVRVPAANLLGDAE- 232

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G ++ M  L    L  A+ +V+G+  ++   I Y + R   G  + +    K  +A+ 
Sbjct: 233 GQGFIQLMLQLPQERLIIAVTAVAGLEAAVNLTIDYTKERTAFGRPIFNFQNTKFKLAEA 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A + A + A         D+   R          A + K W  +    V+ + ++  GG 
Sbjct: 293 ATEAAVSRAF-------LDQCIERHLRGELDVQGAAMAKLWTTERVNKVVDDCLQLFGGY 345

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR + +   + I  G+   M
Sbjct: 346 GYMTEYPIARAWADVRISRIFGGTSEIM 373


>gi|224826999|ref|ZP_03700097.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224600832|gb|EEG07017.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 395

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 34/317 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S +++ ++  +H  WA   +  E       P   T   +G  GLTE   G+D A + ++ 
Sbjct: 101 SAMSVQSSLVMHPIWA---YGTEAQKDKYLPKLATGEWVGCFGLTEPDAGSDPAGMKTRA 157

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +K+ DG Y L G K W  +SP++D F++ A+  +G +  F++ + ++     GL   ++ 
Sbjct: 158 RKV-DGGYQLKGSKMWITNSPIADVFVVWAKDDDGEIRGFVLEKGMQ-----GLSAPKIH 211

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K   R++ T E+   + F     LL  +    GP         L+ A   ++   +  A
Sbjct: 212 GKFSLRASITGEIVMDDVFVPEENLLPGVKGLKGP------FGCLNKARFGIAWGAMGAA 265

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E     A  Y   R   G  L    +++  +A++  +IA   A + ++    D  ++  E
Sbjct: 266 EFCWHAARQYTLDRKQFGRPLAANQLIQLKLANMQTEIALGLAAALQVGRLMDAGRAAPE 325

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  M  + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +
Sbjct: 326 -------MISLIKRNNCGKALDIARVARDMHGGNGIADEFHVIRHVMNLEAVNTYEGTHD 378

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 379 VHAL-ILGRAQTGIQAF 394


>gi|83942684|ref|ZP_00955145.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83846777|gb|EAP84653.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 39/290 (13%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++  + +K +D  Y LSG+K W  +
Sbjct: 106 NGSPEQKAKFLPGLCSGQHVGALAMSEPSAGSDVVSMKLRAEKRNDH-YRLSGNKYWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
            P +D  ++ A+ +   G   +   L + S  G       +K+G R + T EL F +   
Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEV 224

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350
            F  +LG+       +  M  L Y +  +++  G   M   L E + Y   R   G  + 
Sbjct: 225 PFENVLGEEGRGVAVL--MSGLDY-ERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC---- 405
           +  +M+  +AD+   + +A A  + +A + D    +R++ AA            CC    
Sbjct: 282 NFQLMQGKMADMYTAMNSARAYVYEVAKACDRGDVTRADAAA------------CCLYAS 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + A     +A++ +GG+GY+ +  + R +R+  A  + +G+G + +  +L
Sbjct: 330 EEAMKQAHQAVQAMGGAGYLSDNPVGRIFRD--AKLMEIGAGTSEIRRML 377


>gi|299532369|ref|ZP_07045761.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298719607|gb|EFI60572.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 388

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254
           LTE   G+D A++ ++ + + +  Y ++G K F+S   S   ++L    G  G       
Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP         G+ Y + + K+G  S  T  + F N     +   N+     E  KI
Sbjct: 183 AFAVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +L +A  Y + R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKSIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  +  RLA S  +A +R  S   A A+  A    +  C        EA++  GG GYI 
Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346

Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           E  + R  R++  + IL G+   M V+    +LE
Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380


>gi|254775186|ref|ZP_05216702.1| FadE20_1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 30/287 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PKI S E               + + +TE   G+D+ ++ +  ++  D  Y ++G 
Sbjct: 115 RRWLPKIISGE-------------AVLAIAMTEPGTGSDLQSVKTTARRDGD-FYVINGS 160

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVE 288
           K F+S+    D  +++A+ +   G   V  ++ +   N  G    R+  K+G  +  T E
Sbjct: 161 KTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETDENLAGFERGRVLAKMGQHAQDTRE 220

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L FS+       LLG      G  + M+ L    L  A +  +   V++ EAI Y+R R 
Sbjct: 221 LFFSDMRVPVANLLG-AQEGLGFYQLMEQLARERLIIATICAALAEVAVLEAIKYSRERE 279

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      K  +AD   +  A   +       + + K+    A+ A++ A      
Sbjct: 280 AFGRPIGKFQHTKFVLADCKTEALAIKTMVDYAVGQYLDGKNDPATASMAKLFA------ 333

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             + +  ++ + ++  GG GY+ E  IA  Y  S  N I  G+   M
Sbjct: 334 -AEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVNRIYGGTSEIM 379


>gi|256396869|ref|YP_003118433.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256363095|gb|ACU76592.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 397

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 49/287 (17%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML--- 246
           M +  V     ++E   G+D+AAIT++G  + DG  Y ++G K +L++  S   + L   
Sbjct: 118 MAEGEVRAAFSMSEPALGSDVAAITTKG--VPDGDDYVINGQKMWLTNGGSSTLVALLAR 175

Query: 247 -----AQVEGRVGCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------ 293
                A     +  FLV  P    + +P GL       K+G +   T EL  S+      
Sbjct: 176 TDLGEAAAHKNLTTFLVEKPAGFGEVAP-GLTVPGKIAKMGYKGVDTTELVLSDYRIPAN 234

Query: 294 ---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                     F  ++  + V        ++ +   +  ++V    +  A    YA++R  
Sbjct: 235 RILGGAPGKGFAHMMDGVEVG-------RVNVAARACGIAVRAFELGAA----YAQQRTT 283

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     ++  +A++ + + AA A+  R A   D  +    EA  A       KY  
Sbjct: 284 FGKPIAQHQAIQFKLAEMGVKVEAAHAMMVRAAKVKDAGRRNDLEAGMA-------KYLA 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +    V+ ++    GG GY +E  I R YRE+P   +L+G G A +
Sbjct: 337 AEYCKEVVEDSFRIHGGYGYSKEYEIERLYREAPM--LLIGEGTAEI 381


>gi|154292281|ref|XP_001546716.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150846171|gb|EDN21364.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 428

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 37/252 (14%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++  T++      G Y +SG K W  +SP++D F++ A+++  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIR 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307
            F++ R   D  P  L    LK+K G R++ T  ++        +N F  + G      G
Sbjct: 224 GFIIDR--ADCPPGTLETPALKDKNGLRASLTGMIQLDECPVPEANMFQTVEG----LRG 277

Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361
           P         L+SA   ++ GM  +L   I  AR     R+   G  L    ++++ +AD
Sbjct: 278 P------FTCLNSARYGIAWGMTGALENCIDRARTYALERKQFKGNPLAKYQLVQKKLAD 331

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              D A  T    ++    D+ ++  E       M  + K   C  A        E  GG
Sbjct: 332 AVSDAAFGTLACVQVGRLKDKGEAAPE-------MISMIKRQNCDAALRNARTLQEIFGG 384

Query: 422 SGYIEERSIARH 433
           +   +E  I RH
Sbjct: 385 NAASDEYGIGRH 396


>gi|302125401|gb|ADK93986.1| glutaryl-CoA dehydrogenase-like protein [Sphingopyxis
           macrogoltabida]
          Length = 394

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 39/250 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D   + +  +K  DG Y LSG K W  +SP +D F++ A+ E   G++  
Sbjct: 137 FGLTEPDAGSDPGGMRTVAKKDGDG-YVLSGAKTWISNSPFADVFVVWAKSEAHGGKIRG 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F++     D    GL   ++K KI  R++ T         G ++ D  V  G    M   
Sbjct: 196 FIL-----DKGMKGLEAPKIKGKISLRASTT---------GMIMMD-EVRVGADALMPGG 240

Query: 316 IY-------LDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIA 363
                    L+ A   +S   +  AE   +A R     R   G  L    + ++ +AD+ 
Sbjct: 241 EGLGGPFGCLNRARYGISWGAMGAAEFCFHASRQYGLDRKQFGRPLAATQLHQKKLADMM 300

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +DIA     S R+    DE +       +A  M  + K      A  +  +A +  GG+G
Sbjct: 301 VDIAMGLQSSLRVGRLMDEGR-------FAPEMVSMVKRNNVGKALDIARQARDMHGGNG 353

Query: 424 YIEERSIARH 433
             EE  + RH
Sbjct: 354 ISEEYQVIRH 363


>gi|317051582|ref|YP_004112698.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
 gi|316946666|gb|ADU66142.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
          Length = 592

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L+G K F+++   +  F + A+++      FLV
Sbjct: 146 LTEPGSGSDALGAQATAVLSEDGKYYILNGTKQFITNGGFAQLFTVFAKIDKEHFTAFLV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            +  E     GL     + K+G + ++T ++  +N       LLG+  +  G      +L
Sbjct: 206 EKDFE-----GLEIGAEEKKLGIKGSSTTQVILNNCRIPVENLLGE--IGKGHKIAFNVL 258

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   + M  +L E I YA  R   G  +     +   IA++  DI AA +
Sbjct: 259 NVGRFKLGAAVSGAAKM--ALQEGIKYANERKQFGRPISSFGAISEKIANMTADIFAAES 316

Query: 372 LSFRLANSFDEAKSRSEEA------AYARIM---AP---ITKYWCCKMAPAVIAEAMECI 419
           L +RLA   D   +  E+        Y + +   AP   I K +C ++    + E ++  
Sbjct: 317 LIYRLAGLLDNKLATIEKGIDNYYEEYQKGIEEYAPECGIAKVFCSEVLARTVDEVLQIH 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G++ E    R YR+   N I  G+
Sbjct: 377 GGYGFVSEYPAERFYRDERINRIFEGT 403


>gi|154249274|ref|YP_001410099.1| acyl-CoA dehydrogenase domain-containing protein [Fervidobacterium
           nodosum Rt17-B1]
 gi|154153210|gb|ABS60442.1| acyl-CoA dehydrogenase domain protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 379

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K  +     LTE   G+D     +  + + D  Y L+G K F+++  ++D FI+ A 
Sbjct: 113 PLLKGEMIGAFALTEPNAGSDAGNQQTTAKLVGD-YYILNGSKIFITNGGVADVFIVFAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + + S  G    + + K+G R ++T EL F +     +   N+    
Sbjct: 172 TDKSKGTKGISAFIVEKSFEGFKIGKPEKKMGIRGSSTTELIFEDC---KVPKENLLGSE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
               KI L  LD   + V    + +AE      + Y + R   G  +     ++  IAD+
Sbjct: 229 GMGFKIALQTLDGGRIGVGAQALGIAEGAIDEVLRYVKERKQFGKSIGSFQGIQWYIADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                AA  L +  A   D+    S +AA A       K +   +A  V  +A++  GG 
Sbjct: 289 ITKTRAAKLLVYDAAIKKDKGILTSADAAMA-------KKYASDVAMEVTTQAVQIFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  +  + R  R++    I  G+
Sbjct: 342 GYTRDYPVERMMRDAKITQIYEGT 365


>gi|319795898|ref|YP_004157538.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598361|gb|ADU39427.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 382

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255
           + +TE   G+D+  + ++ +K  DG Y ++G K F+++      +++       +G  G 
Sbjct: 126 IAMTEPGAGSDLQGVRTRAEK-KDGGYLINGSKTFITNGYLAGLVLVVCKTDPAQGAKGT 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            ++  ++E     G    R+ +KIG ++  T EL F +       LLG      G  + M
Sbjct: 185 SIL--IVETEGCKGFRVGRVLDKIGMKAQDTSELFFDDVRVPADALLGGQE-GQGFFQLM 241

Query: 313 KILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             L Y +  I+ VS    M  +    + Y R R   G  + +    K  +A+IA  I   
Sbjct: 242 SDLPY-ERTIIGVSALAAMEGAYEATLDYVRDRKAFGKPIAEFQNTKFKLAEIATQIKVG 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   R     D    R + A      A + K W  +    V+ E ++  GG GY+ E  
Sbjct: 301 RAFIDRCVE--DLVAGRLDTAT-----ASMAKLWGTEAQGRVMDECVQLFGGYGYMNEYM 353

Query: 430 IARHYRESPANSILLGSGNAM 450
           +AR Y ++    I  G+   M
Sbjct: 354 VARMYADARVQRIYGGTNEIM 374


>gi|239945420|ref|ZP_04697357.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991882|ref|ZP_04712546.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291448876|ref|ZP_06588266.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351823|gb|EFE78727.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 401

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 45/280 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AI+S+G K  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAISSKGVKDGDE-YVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---- 311
           L +  P       GL      +K+G +   T EL        ++ DL +    V      
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDDLRIPANRVLGGTTG 245

Query: 312 ---MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
               +++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A
Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           + +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|10639438|emb|CAC11440.1| acyl-CoA dehydrogenase (SHORT-CHAIN SPECIFIC) related protein
           [Thermoplasma acidophilum]
          Length = 397

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 53/317 (16%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  K+FS       +A M       GL +TE  GG+D+A I +   K
Sbjct: 115 VIALFGNDDQKKKYLSKVFS------GQAKM-------GLAVTEPGGGSDVANIKTTAVK 161

Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGR----VGCFLVPRLLEDGSPNGLCYQ 273
             D  Y L+G K F+++  ++D F++LA+  VE +    +  F+V R       +G    
Sbjct: 162 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNF-----DGFKSN 215

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSL 332
           ++  K+G R+  T EL   N     +   N+   P      I+ + D +   V+   + +
Sbjct: 216 KIHGKLGVRATDTAELTLENV---KVPAENLVGEPGRGFYYIMTFFDISRAYVAAQALGI 272

Query: 333 AEAIHYARRRHV----SGGILIDQPV-MKRAIADIALDIAAATALSFRLAN---SFDEAK 384
           AE I     R V      G +  QP  ++ AIAD+A  I AA  L++  A+   +F+   
Sbjct: 273 AEGIL---ERAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASFIFNFNPNP 329

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +          +  + K +  + A  V  +AME  G  G     +I R +R++    I  
Sbjct: 330 A----------VTSMAKAYAAETAVYVSRKAMEITGIDGL--SSNIERSFRDAKIMEIWE 377

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+     L +  +L+ G
Sbjct: 378 GTSEIEKLVIARMLKVG 394


>gi|89896113|ref|YP_519600.1| hypothetical protein DSY3367 [Desulfitobacterium hafniense Y51]
 gi|89335561|dbj|BAE85156.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 591

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 40/346 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +     ++G  Y L+G K F+++   +D F++ A+VEG++  F+V 
Sbjct: 148 LTEPGSGSDALGAKATAVLNAEGTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
           R +      GL +   + K+G + ++T ++   +       ++G+L    G V    IL 
Sbjct: 208 RTMP-----GLSFGPEEKKMGIKGSSTRQVILEDVAVPVENIVGELG--RGHVVAFNILN 260

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++   +++L   + YA  R   G  L     ++   A+IA     A ++ +
Sbjct: 261 VGRFKLAAAAIGSAQLALEVTLKYAGERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVY 320

Query: 375 RLANSFDEA--------KSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           R A   +EA          R E       YA I   + K    ++    + E ++  GG 
Sbjct: 321 RTAGLMEEACQDLDVTGDCRKEAGKAIEEYA-IECSLNKVLASEVLDLAVDEGVQIHGGY 379

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           G+I E  I R YR+S  N +  G+      ++  LL  GT L ++  S  E  L ++ K 
Sbjct: 380 GFIAEYPIERMYRDSRINRLFEGTN-----EINRLLVPGT-LLKRAMSG-ELPLLAAAKN 432

Query: 483 VITILRDSISLCKEDKGLARFLT-----EKIALASSAAALYRAGMN 523
           V   L  S  L  E++GLA  L      +K+ L ++  A    GM 
Sbjct: 433 VSKDLM-SAGLGSEEEGLAALLNMTQKAKKLCLMAAGIAAQNLGME 477


>gi|320451517|ref|YP_004203613.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320151686|gb|ADW23064.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 36/272 (13%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-------GR 252
           GLTE   G+D AA+ ++ + +S G Y L+G K F++   ++  ++++A+ +         
Sbjct: 129 GLTEPGSGSDAAALKTRAEPVSGG-YVLNGTKQFITQGSVAGVYVIVARTDPAPSPERKH 187

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
           +G     F  P         GL   R + K+G  ++ T +L   + F     LLG+    
Sbjct: 188 LGISAFAFFRPE-------TGLRIGRKEEKLGLNASDTAQLVLEDLFVAEDSLLGERG-- 238

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G  + +K+L    +  A M+V   R +L  A+ YA++R   G  + +   +   +A+ A
Sbjct: 239 KGFYDVLKVLDGGRIGIAAMAVGLGRAALDYALRYAKQREAFGRPIAEYQGVSFKLAEAA 298

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  L  + A   D  +  + EAA A++ A       C        EA++ +GG G
Sbjct: 299 TELEAARLLYLKAAELKDGGRPYTLEAAQAKLFASEVAVKACD-------EAIQILGGYG 351

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           YI++  + R++R++    I  G G + +L ++
Sbjct: 352 YIKDYPVERYWRDARLTRI--GEGTSEILKLV 381


>gi|262278711|ref|ZP_06056496.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259062|gb|EEY77795.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPKAGAKGMTAFLVEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G     K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + +   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYSAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|192290201|ref|YP_001990806.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283950|gb|ACF00331.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  + L+G+K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   V  M+  +   + Y   R   G  +    +++  +AD+ + + A+ A
Sbjct: 250 ERAVL----AAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|146303057|ref|YP_001190373.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701307|gb|ABP94449.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 356

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 24/271 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
           + R+ D T K    K  +     L+E   G+D +A+ S  +K+ +G + + G K W    
Sbjct: 88  YGRDNDLTEKIAEGK--ILGSFALSEPCCGSDTSAMRSTARKV-NGTWKIDGEKMWITQG 144

Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTF 295
             ++ F++ A+  EG++  FLV         +  C +R K ++ GNR   T  +  +   
Sbjct: 145 LYANVFLVAAKNDEGKISAFLVR--------DTRCMEREKIEVQGNRGTGTARIRMNECE 196

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G L+G   V    +   +I I   S  +++  M     EA ++A+ R   G  L++   +
Sbjct: 197 GELIGGWEVIKYALAIGRIAISAISLGLALGAME----EAYNWAKERQAFGKRLMEHEGI 252

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
               +D   ++ +  AL     N+F +   R+E       +    K     +A  V+   
Sbjct: 253 AWLFSDSIAELESVKALLDATCNAFTKDWKRAEP------LISSLKLISSGVANRVVDRM 306

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG GY +   + R YR+     I  G+
Sbjct: 307 VQVMGGMGYAKLTRVERAYRDVRLTRIGEGT 337


>gi|116048661|ref|YP_792539.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583882|gb|ABJ09897.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383


>gi|302344432|ref|YP_003808961.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641045|gb|ADK86367.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 607

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 54/301 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA-----FIMLAQVEGR 252
           LTE   G+D+ A  ++  K +      IY + G K F+S    D       ++LA++EG 
Sbjct: 167 LTEPDAGSDVGAARTKAVKDTSSDDPRIYFIEGVKRFISCGDHDMTENVIHLVLARIEGD 226

Query: 253 ------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                 +  F+VP++  +     G PN +    +++K+G   ++T  L F       G +
Sbjct: 227 PEGTKGLSLFIVPKIWVNPDGSLGEPNDVFTAGIEHKMGVHGSSTCTLNFGENGKCRGII 286

Query: 299 LGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQ 352
           LG+      P   M K+   ++ A +      + LA + +     YA+ R V     ID+
Sbjct: 287 LGE------PRTGMPKMFQMMNEARLGCGMQALGLAASAYDSARIYAKER-VQSAPFIDR 339

Query: 353 -----PVM-----KRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARI 395
                P++     +R + +      A  AL F++        N  DE K+R  E   A +
Sbjct: 340 RGKAVPIIQHEDVRRMLMNGKSVTEAVRALLFKIGYLTDIAENDPDEEKARHAEH-LADL 398

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +       VI ++++ +GG GY  E  + ++ R+    SI  G+     LD++
Sbjct: 399 LLPIAKSYASDKGFEVIRDSIQAMGGVGYCSEFPVEQYARDMKIISIWEGTNYIQALDLI 458

Query: 456 N 456
            
Sbjct: 459 G 459


>gi|182435009|ref|YP_001822728.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775525|ref|ZP_08234790.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463525|dbj|BAG18045.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655858|gb|EGE40704.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  S  +I+LA+   +G  G   F
Sbjct: 127 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLARTGDDGPRGISAF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           LV R        GL +   + K+G  +  T       V L      G   G   ++   +
Sbjct: 186 LVER-----DDPGLSFGPDEKKMGWNAQPTRQVLLDGVRLPADRLLGEEGGGFRIAMNGL 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              ++ I    A  S+ G + +L  ++ +   R   G  L+D   ++  +A++A ++AAA
Sbjct: 241 NGGRLGI----AACSLGGAQSALDRSLAHLADREAFGARLLDAQALQFRLAEMATELAAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL  + A + D         A A  +  + K++      +V   A++  GG GY+ E  
Sbjct: 297 RALVRQAAEALD------RNVAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYG 350

Query: 430 IARHYRESPANSILLGSGNAM 450
           I +  R+   + IL G+   M
Sbjct: 351 IEKIVRDLRVHQILEGTNEIM 371


>gi|260554589|ref|ZP_05826810.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411131|gb|EEX04428.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 288

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255
           LTE   G+D +AI  + ++  D  + L+G K F++S     ++  F +  +  G+ G  C
Sbjct: 33  LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 91

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308
           FLVP      +  G    R+++K+G  ++  AT+ LE       N  G       ++   
Sbjct: 92  FLVPT-----NTPGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 146

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  SV   R +   A+ YA  R   G  L+    +   +AD+A  I A
Sbjct: 147 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 202

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+   A   D      +EA+ A++ A         MA  V ++A++  GG GY+ + 
Sbjct: 203 AHQLALHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 255

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+   + I  G+ +
Sbjct: 256 PVERIYRDVRVSQIYEGASD 275


>gi|163742750|ref|ZP_02150135.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161384005|gb|EDQ08389.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
          Length = 401

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 21/266 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++  K ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 144 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTV 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +EDG+  GL +  L+ K+G +S  T +++F +       L+G+     G    MK L
Sbjct: 203 --YVEDGTA-GLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGE--EGKGFTYAMKGL 257

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+ A  S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA    
Sbjct: 258 DGGRLNIASCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFL 317

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D+       A  A     + K +  +    V+ + ++  GG GY+ +  I + 
Sbjct: 318 RQAAWKLDQG------APDASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKL 371

Query: 434 YRESPANSILLGSGNAM-VLDVLNLL 458
            R+   + IL G+   M V+   +LL
Sbjct: 372 VRDLRVHQILEGTNEIMRVITARHLL 397


>gi|324512342|gb|ADY45116.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 411

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+AAI ++ +K  D  Y ++G K W      +  F +LA+ E       GR 
Sbjct: 145 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRA 203

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +    ++   NV   P    
Sbjct: 204 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 255

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D+    V+   V LA     EA  YA  R   G  +     +   +AD+A+++
Sbjct: 256 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 315

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +++R A   D      E ++Y    A I K +    A    A A++ +GG+G+  
Sbjct: 316 ELARLVTYRAAVDVDN----KERSSY---YASIAKCFAADTANITAANAVQILGGNGFNI 368

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 369 EYPVEKLMRDAKIYQIYEGT 388


>gi|302342985|ref|YP_003807514.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639598|gb|ADK84920.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 606

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 40/293 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           LTE   G+D+  + ++     D     IY + G K F++     M D  I  +LA++EG 
Sbjct: 166 LTEPDAGSDVGDLLTKATPDPDAGDPRIYKIEGSKRFITCGRHDMVDVIIHLVLARIEGA 225

Query: 253 ------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
                 +  F+VP   + EDGS    N +    +++K+G   +AT  L F       G L
Sbjct: 226 PKGTKGISLFIVPTKWVNEDGSIGEDNDVFCTGIEHKMGIHGSATCSLSFGENGKCRGIL 285

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-----P 353
           LG+ N     +  M     +   + + +    +   A+ YA+ R V G   +D+     P
Sbjct: 286 LGEPNSGMAKMFQMMNEARIGCGVQANAAAAAAYDAALQYAKER-VQGPPFVDRSKPRVP 344

Query: 354 VM-----KRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           ++     +R + ++     AA A+         +A++  + + R      + +M P+ K 
Sbjct: 345 IIQHEDVRRMLMNLKAGTEAARAMIAYNFWMVDVAHNDPDPEVRKAMGMRSELMTPLLKS 404

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +   M   +  +AM+ +GG GY  E  I +HYR+    SI  G+     LD++
Sbjct: 405 YITDMGAQLCRDAMQILGGVGYCAEFPIEQHYRDIKILSIWEGTNFIQSLDLV 457


>gi|254245003|ref|ZP_04938325.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192]
 gi|126198381|gb|EAZ62444.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383


>gi|326384231|ref|ZP_08205913.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197096|gb|EGD54288.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 386

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 128 LAITEPSGGSDVGHLRTTAVRDGDH-YVVNGAKTFITSAVRADFVVTAVRTGGPGAAGVS 186

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G+P G    R  +K+G RS+ T EL F++       L+G  N     +    + 
Sbjct: 187 LLVIEKGTP-GFEVARKLDKMGWRSSDTAELSFTDVRVPVDNLVGAENSGFAQIAQAFVT 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATALS 373
                A  + +  +  L   + + R R   G  LI +  ++ ++ ++A  +D+A     S
Sbjct: 246 ERASLASQAYASAQRCLDLTLEWVRNRETFGKPLIARQSVQDSVTEMARRIDVARTYTRS 305

Query: 374 F--RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              R  +S D+  +   E  +A+  A     W          +A++  GG GY+ E  + 
Sbjct: 306 VVERRVSSGDDLIA---EICFAKNTAVEAGEWVAN-------KAVQLHGGMGYMRESEVE 355

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R YR+     I +G G   +L
Sbjct: 356 RQYRD--MRIIGIGGGTNEIL 374


>gi|322791487|gb|EFZ15884.1| hypothetical protein SINV_11461 [Solenopsis invicta]
          Length = 414

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 20/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ ++ +K+    Y ++G K W  +S ++  F++ A  +   G   +  
Sbjct: 157 LTEPGSGSDAFSLKTEARKVG-AEYVINGTKMWISNSDIAQIFLVFANADPSAGYRGITT 215

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL----NVSTGPVEDMK 313
            L D    GL   + ++K+G R++ T  + F +     G LLG        + G + + +
Sbjct: 216 FLVDRDTPGLTVDKPEDKMGIRASGTCMVHFDDVKIPEGNLLGKFGHGYKYAAGFLNEGR 275

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I        +   +  L   I Y   R   G  +     ++  IA    ++  A  L 
Sbjct: 276 IGI----GAQMIGAAQGCLDATIPYTLDRKQFGQDIFSFQSLQHQIAQAVTELQCARLLV 331

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  K   +EAA A       K++  + A  + A+ ++ +GG G+  +    ++
Sbjct: 332 YNAARLVEAKKDFMKEAAMA-------KFFASETACRITAKCIDFMGGVGFTTDFPQEKY 384

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           YR+    +I  G+ N  +  +   + K
Sbjct: 385 YRDVKIGTIYEGTSNIQLSTIAKCIRK 411


>gi|256059341|ref|ZP_05449543.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
          Length = 333

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S   S+  I+ A  +   G   
Sbjct: 78  GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNSNVAIVFAVTDPAAGKKG 136

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 137 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 191

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 192 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 247

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 248 IETARQMVLHAAALREAGKPCLTEASMAKLVAS-------EMAEQVCSAAIQIHGGYGYL 300

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 301 ADYPVERIYRDVRVCQIYEGTSDVQRL 327


>gi|167576795|ref|ZP_02369669.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----QVEGRV 253
           L +TE  GG+D+AA+  +   I DG  Y ++G K F++S +   +  +A        G  
Sbjct: 130 LAITEPGGGSDVAAL--RASAIRDGDHYVVNGEKVFITSGIRADYYTVAVRTDPHARGAK 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G  L   LL +G   GL    LK K+G  ++ T  L F +        +    G    + 
Sbjct: 188 GLSL---LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVM 243

Query: 314 ILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               L+   ++ S +   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  
Sbjct: 244 QNFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   + A   D A  R+  A  A I   + K +  +        A++ +GG GY+     
Sbjct: 304 AWLEQCAWQMDHADGRA-PALVATIC--MLKNFATQTMQFCADAAVQILGGMGYMRGTRP 360

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE   N I  G+   M
Sbjct: 361 ERIYREVKVNMIGGGAQEIM 380


>gi|114799465|ref|YP_759820.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114739639|gb|ABI77764.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 396

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 31/266 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252
           LGLTE   GTD+ +I +  ++  D  Y ++G K ++S+ +    + L       AQ   +
Sbjct: 125 LGLTEPDAGTDLQSIRTVAKRKGDK-YVVNGTKTWISNAIEGHCVALLVKTDPDAQPRYK 183

Query: 253 -VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE-----LEFSNTFGFLLG 300
            +   +VP++  +      G  NG   ++L  K  +      E      E S   G    
Sbjct: 184 GMSMLIVPKINPETRAPLPGVKNGRKLEKLGYKGIDSGEFIFEDYECDAELSLVGGKEGE 243

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++TG +E  +I +    A  SV   R +L E++ Y++ R   G  + +   ++  + 
Sbjct: 244 GFFMATGGLEIGRINV----AARSVGIARRALRESVQYSQLRKTMGKPICEHQAIQLKLG 299

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A    A+  L    A ++D       EA  A       KY+  + A  V  EAM   G
Sbjct: 300 EMAAKTRASELLVQDAAAAYDRGDRVDMEAGMA-------KYFASETAVEVATEAMRIHG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY +E  I R YR++P   I  G+
Sbjct: 353 GYGYSKEYVIERLYRDAPLMCIGEGT 378


>gi|56697235|ref|YP_167600.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678972|gb|AAV95638.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 388

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 28/266 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  I +    + DG  Y +SG K F+++  +++  I+ A+ E +VG   
Sbjct: 129 IAMTEPGAGSDLQNIKTTA--VKDGNHYRISGSKTFITNGALANMIIVAAKTEPKVGGRG 186

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--------- 307
           +   L+E     G    R  +K+G +SN T EL F +        L    G         
Sbjct: 187 ISLFLVETDGLEGFRRGRNLDKLGMKSNDTSELFFDDMRVPASALLGAEEGQGFVQMMQQ 246

Query: 308 -PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I +Y  + I  V  +RV+L    +Y   R   G  L D    +  +A+ A + 
Sbjct: 247 LPQERLLIGVYAVARIERV--LRVTL----NYVAERSAFGKKLADFQNTQFVLAECATE- 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A +F      D   S   E       A + KYW   +   +I   ++  GG G + 
Sbjct: 300 -ATIAKTF-----LDACISEHLEGNLTTEKASMAKYWLTDLQAKIIDRCLQLFGGYGVMS 353

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E  + R YR++    I  G+   M L
Sbjct: 354 EYPMERMYRDNRIERIYAGTNEIMKL 379


>gi|58262848|ref|XP_568834.1| acyl-CoA dehydrogenase, long-chain specific precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134108452|ref|XP_777177.1| hypothetical protein CNBB4080 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259862|gb|EAL22530.1| hypothetical protein CNBB4080 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223484|gb|AAW41527.1| acyl-CoA dehydrogenase, long-chain specific precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 522

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 33/265 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF 256
           I L ++E   G+D+A + +   K  DG + ++G K ++S  M SD F + A+ EG +  F
Sbjct: 253 ISLAISEAFAGSDVAGLRTTATKQEDGSWVINGTKKWISGGMHSDYFTVGAKTEGGLTVF 312

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR        G+  +++K    + +  T  + F N     +   N+  GP ED  +L+
Sbjct: 313 LVPRT------EGVETKQIKTSY-STAAGTAYITFDNV---KVPAENM-LGP-EDGGLLV 360

Query: 317 YLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L +           S+   RV + E + +  +R V G  L+ Q V++  +A +   + A
Sbjct: 361 ILSNFNHERWVMCCASIRSSRVIVEECLKWGAQRRVFGKPLLAQAVIRAKLASMIAKVEA 420

Query: 369 ATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A    +++++ N   + +SR+     A +    T++     A  +  +A+   GG G 
Sbjct: 421 MQAWLENVTYQMCNMSYKEQSRNLAGQIAFLKMQSTRF-----AGEIADDAVNIFGGRGL 475

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + + +  R    ++IL G+
Sbjct: 476 TKTGMGKFVEQFQRTQKFDAILGGA 500


>gi|317121737|ref|YP_004101740.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
 gi|315591717|gb|ADU51013.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
          Length = 608

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     ++     DG  Y L+G K W  +S  +  F++ A+V+G ++  F+V
Sbjct: 163 LTEPDAGSDALGGKTRAVLSPDGKHYILNGQKQWITNSGFAHVFVVYAKVDGDKMTAFIV 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKIL 315
            R        G+       K+G + ++T  L   E       +LG++        ++  +
Sbjct: 223 ERDFP-----GVSVSEEVRKMGIKGSSTRMLYLNEVPVPVENVLGEVGKGHHIAFNILNI 277

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++   +  +A A  YA+ R   G  +   P++++ +A +A+   A  A+ +R
Sbjct: 278 GRWKLAAGNLGACKELIALATRYAQGRKQFGQPIATFPLIQQKLAAMAVRTYALEAMVYR 337

Query: 376 LANSFDEA----------KSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A +FD +            R   AA +   + A I K +  +    V+ EA++  GG G
Sbjct: 338 TAGAFDASLREIDGDAPDAGRQAIAAISEYAVEASINKVFGSETLDFVVDEAVQIHGGYG 397

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y++E  + R YR++  N I  G+
Sbjct: 398 YMQEYEVERAYRDARINRIFEGT 420


>gi|260554164|ref|ZP_05826423.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404706|gb|EEW98217.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G    +K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|295836729|ref|ZP_06823662.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697599|gb|EDY44532.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 385

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 33/270 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+       + 
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGRHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS--- 305
           R G  L   L+ D    G    R  +K+G +++ T EL F++       LLG+ N     
Sbjct: 184 RFGISL---LVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVQVPVADLLGEENKGFHY 240

Query: 306 ---TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                P E + I         + +   V  A++  Y + R V G  +      K  +A  
Sbjct: 241 LGQNLPQERLGIA----VGAYAQAAAAVRFAQS--YVQDRTVFGKPVAAFQNTKFELAAC 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ AA A+  R   + D  +  + EAA A++       +C ++A  VI   ++  GG 
Sbjct: 295 KAEVDAAEAVCDRALEAHDLGELTAAEAASAKL-------FCTEVASRVIDRCLQLHGGY 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL 452
           GY+ E  IAR Y ++  N I  G+   M +
Sbjct: 348 GYMNEYPIARLYADNRVNRIYGGTSEVMKM 377


>gi|254428961|ref|ZP_05042668.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195130|gb|EDX90089.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 385

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 23/258 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P   T   IG   LTE   G+D  A+ ++ +K  D  Y L+G K F+++ P +  F ++A
Sbjct: 111 PQLATGEVIGAFCLTEPDVGSDSGAVKTRAEKDGDH-YILNGTKRFITNGPHAGLFTVMA 169

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           +    + G   V   + DG   G+   +   K+G +   T ++ F N       ++G   
Sbjct: 170 RTNPDIPGGGGVTAFIVDGDTPGIHRGKADVKMGQKGAHTCDIIFENCRVPAENIIGGQE 229

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
              G    MK+L   D   + +S + V +A     +A++++  R   G  +I+  +++  
Sbjct: 230 -GKGFKTAMKVL---DRGRLHISAICVGVAYRLIEDAVNFSAERKQFGKPIIEHQLIQAM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD   +  A  ++    A S D  +  S +A+         K +C +M   V   A++ 
Sbjct: 286 LADSRAEAFAGRSMVLEAARSKDRGERVSLDAS-------CCKLFCSEMVGRVADRAVQI 338

Query: 419 IGGSGYIEERSIARHYRE 436
            GG+GY+ +  + R YR+
Sbjct: 339 HGGAGYMADYPVERFYRD 356


>gi|194741824|ref|XP_001953387.1| GF17739 [Drosophila ananassae]
 gi|190626446|gb|EDV41970.1| GF17739 [Drosophila ananassae]
          Length = 418

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 28/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A ++   K+    Y L+G K W  +S  +   ++ A V+  +    +  
Sbjct: 159 LSEPGNGSDAGAASTTA-KLEGDSYLLNGTKAWISNSKEASGGLVFATVDKSLKHKGITA 217

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVEDMKIL 315
            L +    GL   + ++K+G R+ +T +L        +L D+ V        P +  KI 
Sbjct: 218 FLTEKDVPGLSIAKKESKMGMRATSTCQL--------VLEDVQVPRSRVLGNPGDGFKIA 269

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A  + A+
Sbjct: 270 MQSLDCGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLARMQLIQQKLADMASRVEAS 329

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R A   D     ++EAA A++ A     +C         + ++ +GG GY  +  
Sbjct: 330 RLLTWRAAWLKDNGLPFTKEAAMAKLHASEAATYCSH-------QCIQVLGGMGYTTDLP 382

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
              +YR S    I  G+     + + N
Sbjct: 383 AELYYRNSRVTEIYEGTSEIQRIVIAN 409


>gi|300785222|ref|YP_003765513.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299794736|gb|ADJ45111.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 26/280 (9%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           +RE        M    V   + LTE  GG+D+ A+ +  ++  +  Y + G K W  ++ 
Sbjct: 101 TREQQERYLPRMATGEVRATMALTEPGGGSDLQALRTTARRAGES-YVVDGAKTWITNAR 159

Query: 239 MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            S    +L + +        G  ++  L E G+  G    R   K+G +   + EL FS+
Sbjct: 160 RSQLVALLCKTDPHAEPAHAGISIL--LAEKGA--GFHVSRDLPKLGYKGVESCELSFSD 215

Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                G LLG      G  + M+ L    +  A  ++   R +LA+++ YA+ R   G  
Sbjct: 216 FRVPVGALLGG-EEGRGFAQMMRGLEIGRIQVAARALGVGRAALADSLRYAQERETFGKP 274

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   +AD+A  + AA  L    A  +D         A A + A + K +  + A
Sbjct: 275 IWQHQSVGNLLADMATKLEAARQLVHHAARRYD-------SGARADLEAGMAKLFASETA 327

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 328 MEIALNAVRVHGGYGYSTEFDVERYFRDAPL--MIVGEGT 365


>gi|298249540|ref|ZP_06973344.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963]
 gi|297547544|gb|EFH81411.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963]
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  ++  D  Y L+G K W  +   +   I+ A ++  +    +  
Sbjct: 125 LTEINAGSDAASMETTAREEEDS-YVLNGEKIWITNGLSATTTIVFATLDRGLRHKGICA 183

Query: 261 LLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L +G+P G     + NK +G+R++    + F         LLG+             + 
Sbjct: 184 FLLEGNPPGCQRDPMPNKELGHRASEHARITFKECRVPRSALLGEAGQGFAIA-----MS 238

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + V+   V +A+A     + Y R+R   G  L D  +++  +AD+A DI AA  
Sbjct: 239 ALECGRIGVASGAVGIAQACLDACVDYTRQRRQFGQRLADFQMLQGTLADMAADIEAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A +    K R   A  A     I K +  + A    +EA+   G  GY  E  + 
Sbjct: 299 LTYRAAWT----KDRDLPATRA---TSIAKLFATEAAMRAASEAVLLHGNRGYSNEYPVE 351

Query: 432 RHYRESPANSILLGS 446
           RHYR+     I  G+
Sbjct: 352 RHYRDIKGLQIYEGT 366


>gi|229488857|ref|ZP_04382723.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324361|gb|EEN90116.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 389

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           G  LTE   G+DIA++ +  ++  DG + LSG K ++S+   +D  ++ A+ +   G   
Sbjct: 126 GFALTEPDAGSDIASMRTVARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 184

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+VP+    G+P G+ Y   ++K+G RS  T  +   +    L  D  + T      
Sbjct: 185 ITAFVVPK----GTP-GISYSEPQDKMGIRSAPTYTVYLDDV--VLPLDSVIGTEGRGGN 237

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L+ A + V+ M   +A       R + +       P+       + L    A  +
Sbjct: 238 IALTALNRARIDVAAMANGIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLV 297

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R+  + D A    +     R  A I+KY   +   +++ + ++  GG+G++ E  I R
Sbjct: 298 TSRV--TADWAADVKDAGQDIRRAASISKYVATEACFSIVDQTVQIHGGAGFMRESEIER 355

Query: 433 HYRESPANSILLGSGNAMVLDV 454
            YR+     I  G+    +L +
Sbjct: 356 LYRDCRILRIFEGTSQIQLLTI 377


>gi|71065461|ref|YP_264188.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038446|gb|AAZ18754.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 386

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ ++  K  +  Y L+G K F+S   S   +++    G  G   +   
Sbjct: 124 LTEPNAGSDAASLRTKADKQGE-YYVLNGEKTFISGAGSTDVLVVMARTGGAGPKGISAF 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKI 314
           + D    G+ Y + ++K+G ++  T  + F        N  G       ++   ++  +I
Sbjct: 183 VVDADSAGIEYGKNEHKMGWKAQPTRTISFKDVKVPVENLIGEEGQGFRIAMKGLDGGRI 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I     I +V   + +L  A +Y + R   G  +     ++  +AD+      A  + +
Sbjct: 243 NI----GICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLY 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+  D   +  + + Y  +   ++   C  +A     EA++  GG GY+ E  + RH 
Sbjct: 299 LAASKVD--NNDVQASTYCAMAKRLSTDLCFDVAN----EALQLHGGYGYLNEYPLERHV 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDLRVHQILEGTNEIM 368


>gi|226308521|ref|YP_002768481.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187638|dbj|BAH35742.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 389

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 21/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG------ 251
           + +TE   G+D+A I +     +DG  Y L+G K F++   ++D  +++ +         
Sbjct: 124 IAMTEPGTGSDLAGIRTSATLSADGSHYILNGAKTFITGGVLADRVLVVCRTSPAPSDNR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R+G  +   L  D +  G    R  +KIG  ++ T EL FS+     G LLG+   +   
Sbjct: 184 RLGLSI---LSVDTTSEGYQVGRKLDKIGMHASDTAELSFSDVRVPVGDLLGEEGQAFSY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + D  I   L   + S +    ++  AI Y   R V G  +      K  +A+ A +  A
Sbjct: 241 LGDNLIRERLGIGVESAATAAAAIQFAIDYTTARTVFGSPVSAFQNTKFVLAECAAEQTA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  +    FD  +  + +AA  ++       +  ++A  V+ + ++  GG GY+ E 
Sbjct: 301 AQTLVDKAVELFDIGELTAADAAEVKL-------FTTEVAARVVDKCLQLHGGYGYMREY 353

Query: 429 SIARHYRESPANSILLGS 446
            IAR Y ++  + I  G+
Sbjct: 354 PIARLYTDTRVSRIYGGT 371


>gi|163736604|ref|ZP_02144023.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161390474|gb|EDQ14824.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 381

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++  K ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +EDG+  GL +  L+ K+G +S  T +++F +       L+G+     G    MK L
Sbjct: 183 --YVEDGTA-GLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGE--EGKGFTYAMKGL 237

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+ A  S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA    
Sbjct: 238 DGGRLNIASCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D+       A  A     + K +  +    V+ + ++  GG GY+ +  I + 
Sbjct: 298 RQAAWKLDQG------APDASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKL 351

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 352 VRDLRVHQILEGTNEIM 368


>gi|86138907|ref|ZP_01057479.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824554|gb|EAQ44757.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 406

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K + G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAEKTATG-YKLTGSKMWISNAPIADVFVVWAKSEEHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   +++NK   R++ T E+           LL  +    GP    
Sbjct: 207 FVLEKGMK-----GLSAPKIQNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AEA  +A R     R   G  L +  + +  +A++  +I 
Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHAARQYGLDRTQFGRPLANTQLFQLKLANMQTEIT 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA +  E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 316 LGLQSSLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARNARDMHGGNGISLE 368

Query: 428 RSIARH 433
            ++ RH
Sbjct: 369 FNVIRH 374


>gi|323490855|ref|ZP_08096053.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323395463|gb|EGA88311.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 378

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 56/311 (18%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDI 211
           SV +  ++   +  ++ K + PK+ S EY                LG   LTE   G+D 
Sbjct: 91  SVGTNPILNFGSQQQIEK-YVPKLASGEY----------------LGAFCLTEPAAGSDA 133

Query: 212 AAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            ++ ++   + DG  Y ++G K F+++   +D +I+ A  +   G   +   + +    G
Sbjct: 134 GSLKTKA--VLDGEDYVINGSKVFITNGGAADTYIVFASTKPSAGSRGISAFIVEKDTPG 191

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKIL 315
           L   + + K+G   + TV+L F N               F   + +LNV        +I 
Sbjct: 192 LIIGKNEKKMGLHGSKTVQLTFDNMRVPAENLLGEENKGFSIAMANLNVG-------RIG 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           I    A  ++     +   A+ YA+ R   G  +  Q  +   +AD+A  + A+  L + 
Sbjct: 245 I----AAQALGIAEAAYEYAVAYAKEREQFGKPIAHQQGVGFKLADMATQVEASKLLVYN 300

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A+ + + K  ++EA+ A++ A        K A  V  EA++  GG GY ++  + R +R
Sbjct: 301 AADLYSKGKDCNKEASMAKLFA-------SKTAMDVTIEAIQVFGGYGYTKDYPVERLFR 353

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 354 DAKVTEIYEGT 364


>gi|15595943|ref|NP_249437.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218893310|ref|YP_002442179.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|296390906|ref|ZP_06880381.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313105566|ref|ZP_07791832.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946632|gb|AAG04135.1|AE004509_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218773538|emb|CAW29351.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310878334|gb|EFQ36928.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383


>gi|148547500|ref|YP_001267602.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511558|gb|ABQ78418.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%)

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           G +MS   SV    ++A  T  +  + W P++ S E               IG   LTE 
Sbjct: 85  GAMMSIHNSVGCGPLLAYGTADQ-QQQWLPRLASGE--------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G      FLVP
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312
                 +P G    R ++K+G R++ T  + F N       +LG+    L ++   +E  
Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L
Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  + R
Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352

Query: 433 HYRESPANSILLGS 446
           +YR++    I  GS
Sbjct: 353 YYRDARITQIYEGS 366


>gi|312131585|ref|YP_003998925.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311908131|gb|ADQ18572.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 595

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 68/352 (19%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTNKAPMQKTSVAI 198
           L AGH  S SV  ++   + T P V+         + PK+ S E+               
Sbjct: 100 LGAGH--SFSVAQSAHTGIGTLPIVYYGNEEQKAKYLPKLASGEWKAA------------ 145

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVG 254
              LTE   G+D  +  ++ +   DG  Y ++G K W  +   +D FI+ A++E    + 
Sbjct: 146 -YCLTEPDSGSDANSGKTKAELTEDGKFYKINGQKMWITNGGFADIFIVFAKIEDDKNLT 204

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F+V +     S  G+     ++K+G + + T ++ F           N    PVE+M  
Sbjct: 205 AFIVEK-----SFGGITMNEPEHKMGIKGSDTRQIFF-----------NDCMVPVENMLS 248

Query: 313 ------KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                 KI +       +  A+ +V G +  +  AI+YA  R   G  +     +K  +A
Sbjct: 249 KRENGFKIAVNILNVGRIKLAVAAVGGSKGVINHAINYANERKQFGISIGRFGAIKHKLA 308

Query: 361 DIALDIAAATALSFRLANSFDE------AKSRSEEAAYAR------IMAPITKYWCCKMA 408
           ++A+ I       +R   + D+      A   S+  A  +      I   I K    +  
Sbjct: 309 EMAIRIWTTETACYRAGQNIDDLIDSLTASGMSDADAKLKALEQYAIECAILKVNGSETL 368

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             V  E ++  GG GY  +  + R YR+S  N I  G+     + VL++L K
Sbjct: 369 DYVADEGVQVYGGMGYSADAPMDRAYRDSRINRIFEGTNEINRMLVLDMLLK 420


>gi|309779196|ref|ZP_07673959.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308922000|gb|EFP67634.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 391

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 24/246 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             L+E   G+D+AA+    ++  DG  Y L G K W  +  ++D +I+ A+     G   
Sbjct: 130 FALSEPEAGSDVAAMACAARE--DGTDYVLDGEKTWISNGGIADFYIVFARSGEAPGSRG 187

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   ++E G+P     +R+ N I    +    L F+N    +     V     E  K+ +
Sbjct: 188 ISAFIVEAGTPGFEIAERI-NVIA--PHPLARLRFTNCR--IPASQRVGAAG-EGFKVAM 241

Query: 317 -YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD    SV+       R +L EA+  A  R +  G+L D  + +  +A +A  I +A 
Sbjct: 242 RTLDVFRTSVAAAALGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAA 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A   D+ ++ + EAA A++ A        + A  VI  A++  GG G + E+ +
Sbjct: 302 LLTYRAAWQRDQGRNVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPV 354

Query: 431 ARHYRE 436
            R YRE
Sbjct: 355 ERLYRE 360


>gi|254487654|ref|ZP_05100859.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044523|gb|EEB85161.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 43/284 (15%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++  + +K +D  Y LSG+K W  +
Sbjct: 106 NGTPEQKAKFLPGLCSGAHVGALAMSEPSAGSDVVSMKLRAEKRND-HYRLSGNKYWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
            P +D  ++ A+ +   G   +   L + S  G       +K+G R + T EL F +   
Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFEDVEV 224

Query: 295 -FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGG 347
            F  +LG+          +++L+  LD   + ++G     M   L E + Y   R   G 
Sbjct: 225 PFENVLGEEG------RGVRVLMSGLDYERVVLAGIGLGIMAACLDEIMPYMAERKQFGQ 278

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC- 405
            +    +M+  +AD+   + +A A  + +A + D  + +R++ AA            CC 
Sbjct: 279 PIGSFQLMQGKMADMYTAMNSARAYVYEVAKACDRGEVTRADAAA------------CCL 326

Query: 406 ---KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              + A     +A++ +GG+GY+ +  + R +R++    I  G+
Sbjct: 327 YASEEAMKQAHQAVQAMGGAGYLSDNPVGRIFRDAKLMEIGAGT 370


>gi|167584606|ref|ZP_02376994.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 377

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F+++       ++  V     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAVTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    + + K+G R++ T  + F N     + + N+     E +KI 
Sbjct: 184 FLVPT-----DTPGFVVGKPEKKMGIRASDTCPITFENC---AIPEENLLGARGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369
           L  L+   + ++   + +A A     RR+    +   +P+     +++ +AD+A  I AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMATQINAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A           EA+ A++ A        +MA  V ++A++  GG GY+ +  
Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|254443828|ref|ZP_05057304.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae
           bacterium DG1235]
 gi|198258136|gb|EDY82444.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae
           bacterium DG1235]
          Length = 393

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 118/259 (45%), Gaps = 26/259 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
           G+TE++ G+D  A+ +   + +DG Y ++G K ++  +P++D  ++ A+ +   G + + 
Sbjct: 138 GITEEQSGSDAMAMQTLATRRNDG-YLVNGEKCYIGFAPIADLILLFAKTDPNAGSWGIS 196

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDM 312
             L D +  G+     + K+G R+     + F +       LLG     L++    +E  
Sbjct: 197 AFLVDANTPGIHKSDNREKMGLRTLPMGNIAFRDCLIPHSALLGSEGLGLSLFNESMEWE 256

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  I        V  M   L   I +A++R   G  + +   +   IAD+ + +     L
Sbjct: 257 RSFIL----ATQVGAMARQLDSCIAFAKKRSQFGKSISEFQSISNRIADMRVRLETCRLL 312

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERS 429
            ++ A+  D+ +S + E+A  ++           ++ + +A +M+ +   G  GY+ E  
Sbjct: 313 LYKTASLKDQGESITLESAMTKLT----------LSESFVASSMDAVRIHGAQGYLSEFE 362

Query: 430 IARHYRESPANSILLGSGN 448
           + R+ R++    I  G+ +
Sbjct: 363 VERNLRDATGGLIYAGTSD 381


>gi|188995036|ref|YP_001929288.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594716|dbj|BAG33691.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas
           gingivalis ATCC 33277]
          Length = 379

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVGC 255
            GLTE   GTD AA  +  ++  D  + L+G+K F+++     +   F M  + +G  G 
Sbjct: 123 FGLTEPNAGTDAAAQQTFAEEKEDH-FVLNGNKIFITNAEYAHVYVVFAMTDKSQGTRG- 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308
            +   ++E G+P G    + + K+G R +AT EL F N         G + G   ++   
Sbjct: 181 -ITAFIVEKGTP-GFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKT 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  +I I    A  ++   + ++ E + Y + R   G  +      +  +AD+   I A
Sbjct: 239 LDGGRIGI----ASQALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQA 294

Query: 369 ATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  L  RLA+   + K   + E+A A++       +C + A  +  +A++  GG GY  E
Sbjct: 295 SRLL-VRLASWKKDMKMPYTMESAQAKL-------YCAETAMDMTTKAVQFHGGYGYTRE 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
             + R  R++    I  G+     L +  NLL+
Sbjct: 347 YPVERMMRDAKITEIYEGTSEVQRLVIASNLLK 379


>gi|154285672|ref|XP_001543631.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150407272|gb|EDN02813.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 434

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGI 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     +LG LN        +K+L
Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFVPQENMLGALN------RGVKVL 276

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   ++A+
Sbjct: 277 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 336

Query: 370 TALSFRLANSFDEAKS-----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A ++  A   DEA +           R+++ A A + A      C         +A++ 
Sbjct: 337 RAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAERATECA-------LDAIQL 389

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +GG+GYI E    R  R++    I  G+G + +  +L
Sbjct: 390 MGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424


>gi|324504264|gb|ADY41841.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 340

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+AAI ++ +K  D  Y ++G K W      +  F +LA+ E       GR 
Sbjct: 74  VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRA 132

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +    ++   NV   P    
Sbjct: 133 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 184

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D+    V+   V LA     EA  YA  R   G  +     +   +AD+A+++
Sbjct: 185 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 244

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +++R A   D  K RS         A I K +    A    A A++ +GG+G+  
Sbjct: 245 ELARLVTYRAAVDVDN-KERSS------YYASIAKCFAADTANITAANAVQILGGNGFNS 297

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 298 EYPVEKLMRDAKIYQIYEGT 317


>gi|295704447|ref|YP_003597522.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294802106|gb|ADF39172.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 592

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219
           +    T    + + PK+ S EY              IG   LTE   G+D +AA T    
Sbjct: 122 ITYFGTKEQKEKYLPKLASGEY--------------IGAYCLTEPEAGSDALAAQTKAVL 167

Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKN 277
                 Y L+G K +++ +  SD FI  A+V+G     F+V +  E     GL     + 
Sbjct: 168 NPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEHFTAFIVEKGFE-----GLSLGPEEK 222

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRV 330
           K+G + ++T  + + +       +LG   V  G +  + +L      L SA M  +    
Sbjct: 223 KMGIKGSSTRPVVYEDCLVPVENVLG--QVGKGHLIALNVLNLGRFNLGSACMGAAKYAF 280

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            LA A  Y + R      + +    K  IA +A  I A+ ++ +R A   +EA     E+
Sbjct: 281 ELALA--YTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEEALGGLYES 338

Query: 391 AYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +++A           + K +  +    +  E+++  GG+G+I+E  I + YR+S  N
Sbjct: 339 GNHKLVAKQLAEFAMECSVCKVYGSETLDLIADESLQLHGGAGFIQEYKIEQVYRDSRIN 398

Query: 441 SILLGS 446
            I  G+
Sbjct: 399 RIFEGT 404


>gi|226315081|ref|YP_002774977.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis
           NBRC 100599]
 gi|226098031|dbj|BAH46473.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus
           brevis NBRC 100599]
          Length = 380

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 34/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A + +   +  D  Y L+G K F+++   ++ +I+ A  +  +    +  
Sbjct: 125 LTEAGSGSDSAGMRTTAVRDGDH-YILNGTKIFITNAGEAEIYIVFAVTQPELNHKGITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312
            + +   +G    + + K+G RS+ T+ + F         D+ V   PVE+         
Sbjct: 184 FIVEKGMDGFTMGKKEKKLGIRSSPTLAVNFE--------DVRV---PVENRLGEEGQGF 232

Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI ++ LD     ++   + +A+     A +YA+ R   G  +     ++  +AD+A  I
Sbjct: 233 KIAMMTLDGGRNGIAAQALGIAQGAYEHARNYAKERSQFGKPIASLQAIQFKLADMATKI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L+++ A   D+     + +A +++ A  T       A  V  EA++  GG GY  
Sbjct: 293 EASRLLTYQAAWLEDQGLPYGKASAMSKVFAGDT-------AMEVTTEAVQVFGGYGYTR 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  + R  R++    I  G+     + + N L K
Sbjct: 346 EYPVERFMRDAKITQIYEGTNEIQRVVISNFLLK 379


>gi|225554498|gb|EEH02795.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 434

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGI 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     +LG LN        +K+L
Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFVPQENMLGALN------RGVKVL 276

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L+  ++S      M+ +L   + Y   R   G  +    +++  +AD+   ++A+
Sbjct: 277 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 336

Query: 370 TALSFRLANSFDEAKS-----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A ++  A   DEA +           R+++ A A + A      C         +A++ 
Sbjct: 337 RAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAERATECA-------LDAIQL 389

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +GG+GYI E    R  R++    I  G+G + +  +L
Sbjct: 390 MGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424


>gi|313117069|ref|YP_004038193.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312295021|gb|ADQ69057.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 45/308 (14%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTP------RVHKD-WAPKIFSREYDPTNKAPMQKT 194
           +M +LEAG     S+ S    AL+  P         KD W PK+ S E            
Sbjct: 77  IMQELEAGDSGLRSMASVQG-ALVMYPIHAFGSEAQKDEWLPKLGSGE------------ 123

Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---- 248
             A+G  GLTE   G++ +A+ +  ++  D  Y L+G K W  +SP+SD  ++ A+    
Sbjct: 124 --AVGCFGLTEPEHGSNPSAMETYAERDGDE-YVLNGSKTWITNSPISDVAVVWARDRSS 180

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +  V  FLV     +   +G+   ++ +K+  R++ T E+   N       +L ++   
Sbjct: 181 EDTPVRGFLV-----ETDRDGVTTNKIDDKLSLRASITGEIALQNVRIPTENVLPNVKGM 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            GP+  +    Y   A  ++   + +  EA  YA  R   G  +    + ++ +A++A  
Sbjct: 236 KGPLSCLTQARY-GIAWGAIGAAKDAFREAQDYATDREQFGQPIGGFQLQQQNLAEMATQ 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L+ RLA   ++   R E  + A       K    +MA      A E +GG+G  
Sbjct: 295 ITLAELLAHRLAELKEQGNLRPEHVSMA-------KRNNVRMARNQTRVAREMLGGNGIT 347

Query: 426 EERSIARH 433
            + S  RH
Sbjct: 348 TDYSPMRH 355


>gi|21220243|ref|NP_626022.1| acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256788642|ref|ZP_05527073.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772537|ref|ZP_06531915.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|10799845|emb|CAC12923.1| putative acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289702736|gb|EFD70165.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 397

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 16/259 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A + +  ++ + G + L+G K W  +
Sbjct: 119 FGSEGQRQEWLPRMAGGEVIGCFGLTEPDHGSDPANMRTNAKRDTGGDWVLNGRKMWITN 178

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++   ++ AQ E  +  F+VP      SP G     +K+K   R++ T EL   +   
Sbjct: 179 GSVAGVAVVWAQTEEGIRGFVVP----TDSP-GFSAPEIKHKWSLRASVTSELVLDDVRL 233

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L  +TG    +  L +    I+  S+   R S   A+ YA+ R   G  +    +
Sbjct: 234 PADAVLPEATGLRGPLSCLSHARYGIVWGSMGAARSSFEAAVEYAKSREQFGRAIGGFQL 293

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +   
Sbjct: 294 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTI--- 350

Query: 415 AMECIGGSGYIEERSIARH 433
               +G +G   E  + RH
Sbjct: 351 ----LGANGISLEYPVMRH 365


>gi|254239110|ref|ZP_04932433.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719]
 gi|126171041|gb|EAZ56552.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383


>gi|326403394|ref|YP_004283475.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050255|dbj|BAJ80593.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 391

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ ++  +  D  Y L G K F+S +  +D ++++A+  G     +  F
Sbjct: 134 LTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATDLYLVMARSGGAGPRGISSF 192

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPV 309
           LVP+        GL +   + K+G  +  T ++ F +      F LG       ++   +
Sbjct: 193 LVPK-----DAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFRLGAEGEGFRIAMSGL 247

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I       S+ G + +L +A  Y   R   G  L D   ++  +AD+A ++ AA
Sbjct: 248 DGGRVNI----GACSLGGAQAALEKAQRYMGEREAFGRRLEDFQALQFRLADMATELEAA 303

Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               +  A S D  ++  +   A A+ +A  T +        V   A++  GG GY+ E 
Sbjct: 304 RLFLWSAAASLDRGEADTTRRCAMAKRIATDTGF-------EVANNALQLFGGYGYLAEY 356

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I +  R+   + IL G+   M L V
Sbjct: 357 GIEKIVRDLRVHQILEGTNEIMRLIV 382


>gi|271970138|ref|YP_003344334.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270513313|gb|ACZ91591.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 607

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 47/297 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-VGC 255
           LTE   G+D+ A  ++  +  DG + + G K F++S   D       ++LA+ EG  VG 
Sbjct: 164 LTEPDAGSDVGAGRAKAVRQDDGTWHIEGVKRFITSAEHDMADNIFHLVLARPEGHGVGT 223

Query: 256 -----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
                FLV +   D      G  NG+    ++ K+G + + T EL F       G L+G+
Sbjct: 224 KGLSMFLVSKYHVDLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGEKHPAVGTLIGE 283

Query: 302 LNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---DQPVM 355
           ++     ++ M ++I    +     +++ +      A+ YAR R V G  L    D+   
Sbjct: 284 VHEG---IKQMFMIIEHARMMVGTKAIATLSTGYLNALEYARTR-VQGADLTQMADKSAP 339

Query: 356 KRAIA---DI--ALDIAAATALSFR----LANSFDEA------KSRSEEAAYA--RIMAP 398
           +  IA   D+   L +  + A   R    L  ++ +A      + R +E A A   ++ P
Sbjct: 340 RVTIAHHPDVRRELMLQKSYAEGMRALVLLTATYQDAVQIAAFEGRRDEHAEAMNDLLLP 399

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K    + +  ++A +++ +GGSGY+++  I ++ R++  +S+  G+     LD+ 
Sbjct: 400 LVKGVGSERSYELLARSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGTTAIQGLDLF 456


>gi|34540812|ref|NP_905291.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas
           gingivalis W83]
 gi|34397126|gb|AAQ66190.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas
           gingivalis W83]
          Length = 379

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVGC 255
            GLTE   GTD AA  +  ++  D  + L+G+K F+++     +   F M  + +G  G 
Sbjct: 123 FGLTEPNAGTDAAAQQTFAEEKEDH-FVLNGNKIFITNAEYAHVYVVFAMTDKSQGTRG- 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308
            +   ++E G+P G    + + K+G R +AT EL F N         G + G   ++   
Sbjct: 181 -ITAFIVEKGTP-GFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKT 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  +I I    A  ++   + ++ E + Y + R   G  +      +  +AD+   I A
Sbjct: 239 LDGGRIGI----ASQALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQA 294

Query: 369 ATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  L  RLA+   + K   + E+A A++       +C + A  +  +A++  GG GY  E
Sbjct: 295 SRLL-VRLASWKKDMKMPYTMESAQAKL-------YCAETAMDMTTKAVQFHGGYGYTRE 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
             + R  R++    I  G+     L +  NLL+
Sbjct: 347 YPVERMMRDAKITEIYEGTSEVQRLVIASNLLK 379


>gi|289641203|ref|ZP_06473370.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508965|gb|EFD29897.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 614

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252
           LTE   G+D+ A  ++     DG + + G K F+++     P +   + LA+  G     
Sbjct: 164 LTEPDAGSDVGAGRTRAVPQPDGSWHIEGVKRFITNGDWDVPENIFHLTLARPVGHGPGT 223

Query: 253 --VGCFLVPRLLED---GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  FLVP+ L D   G P   NG+    ++ K+G + +AT EL +       G+L+GD
Sbjct: 224 KGLSMFLVPKFLVDPNTGEPRERNGVHVSNVEKKMGLKVSATCELRYGEKQPAVGWLVGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349
             V  G  +  +++ Y  +     +++ +      A+ +AR R V G  L          
Sbjct: 284 --VHDGIAQMFEVIEYARMMVGTKAIATLSTGYLNALEFARTR-VQGADLTRLLDKTAPR 340

Query: 350 ---IDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYAR-IMAPI 399
              I  P ++R +           AL    A   D       A +R E A     ++ PI
Sbjct: 341 VTVIHHPDVRRMLMVQKAYAEGMRALVLYTATIQDRVALAQAAGTRDELAERLNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K    + +  ++A +++ +GGSGY+++  I ++ R++  +++  G+
Sbjct: 401 VKGVGSERSYELLATSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGT 447


>gi|152984346|ref|YP_001350116.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150959504|gb|ABR81529.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G     CF
Sbjct: 124 LTEPDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP         G+ Y R ++K+G R+  T  + F       G  +G      G V  MK
Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFDGVRIPAGNRIG--PEGQGFVYAMK 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L+ A  S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  
Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A+  D         A A +   + K +       V  EA++  GG GY+ +  + 
Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFYVCNEALQLHGGYGYLNDYPLE 349

Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           R  R++  + IL G+   M V+    LLE+G  L
Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383


>gi|317497765|ref|ZP_07956078.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316894954|gb|EFV17123.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEGRV 253
           LTE   G+D A   +    I +G  Y L+G K F+++ P++D ++++A      + +G +
Sbjct: 125 LTEPDAGSDAAGCKTTA--IWNGKEYILNGLKCFITNGPLADYYMVVALTNPELKTKG-L 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R  E     G+   ++++K G R     E+ F N       +LG+     G   
Sbjct: 182 TAFIVEREWE-----GVSIGKIEDKCGIRCAQVSEVIFDNVRVPKENMLGE--EGKGFAV 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK L   D   + V+   + +A+     A +Y + R   G  L     +   +A++  +
Sbjct: 235 AMKDL---DGGRIGVAAQGLGIAKGAYDIAFNYLKEREQFGKPLYKNQYLAFKMAELETE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  + ++ A    E KS S  AA A+++       C   A  V  EA++ +GG+GY+
Sbjct: 292 IEMAQYMLYKAATDKQEGKSYSVPAAKAKMV-------CTDAAMHVATEAVQMLGGNGYM 344

Query: 426 EERSIARHYRESPANSILLGS 446
           +E  + R  R++    I  G+
Sbjct: 345 KEYHVERMLRDAKITQIYEGT 365


>gi|313498568|gb|ADR59934.1| AcdA [Pseudomonas putida BIRD-1]
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%)

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           G +MS   SV    ++A  T  +  + W P++ S E               IG   LTE 
Sbjct: 85  GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G      FLVP
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312
                 +P G    R ++K+G R++ T  + F N       +LG+    L ++   +E  
Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L
Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  + R
Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352

Query: 433 HYRESPANSILLGS 446
           +YR++    I  GS
Sbjct: 353 YYRDARITQIYEGS 366


>gi|260434191|ref|ZP_05788162.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260418019|gb|EEX11278.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +   NG       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEMNGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGKGVAVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMA-----ACLDEIMPYLAERKQFGKPIGTFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYIYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  ++R +R++    I  G+
Sbjct: 351 DAPVSRLFRDAKLMEIGAGT 370


>gi|256396544|ref|YP_003118108.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362770|gb|ACU76267.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 417

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 20/275 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGC- 255
             +TE   G+D ++  +   + + G + L+G KWF++      F+++   A VEG  G  
Sbjct: 122 FAVTEPEAGSDPSSGVTVATRTAGG-WLLNGEKWFVTCGDIADFLLVQADAIVEGAQGPE 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL----NVSTGP 308
            L      D +  GL   R+ + + +  N   E   ++ F     +LGD+     ++   
Sbjct: 181 KLATLFFVDKNAPGLEMTRVPHFMHHAVNGHPEFTLTDVFVADEDVLGDVGEGYELTKEW 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             D +++I    A  +V     +L+EA  +A RR   G  + +  +++  +AD A+DIA 
Sbjct: 241 FTDERLMI----AARTVGAAERALSEARDWAVRRQAFGQPIAEFQLIQGMLADCAVDIAV 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A + ++A   D+  +   +  +A+  A   K    + A  V    ++  GG GY    
Sbjct: 297 NRAYTHQVAWEADQPDT-DRKTLHAK--ASTAKLAASEAAGRVADRCVQIFGGRGYDSAF 353

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-LLEKGT 462
           ++ R +RE   + I  G+     + + N L+++GT
Sbjct: 354 AVERIFRELRVDRIWEGTSEIQRVIIANELIKRGT 388


>gi|297198269|ref|ZP_06915666.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197715522|gb|EDY59556.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D A++ ++  +  D  + ++G K W     ++D + ++A+   EG  G   F
Sbjct: 133 LSEPSSGSDAASLRTRAARDGD-EWVITGTKAWITHGGVADFYTVMARTGEEGPRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP        +G+     + K+G + + T ++ F       + D+       +   I L
Sbjct: 192 LVP-----ADADGVSAAAPEKKMGMKGSPTAQVHFDAV---RVPDVRRIGDEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVGYATGRLQFGRPIADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D  +  +++AA A       K  C   A  V  +A++ +GG GY  +   
Sbjct: 304 ALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMKVTTDAVQVLGGYGYTADFPA 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYMREAKVLQIVEGT 372


>gi|146282285|ref|YP_001172438.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145570490|gb|ABP79596.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 31/264 (11%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251
           AIG   LTE + G++   + ++ + + DG + L+G K F S+       ++  V     G
Sbjct: 120 AIGCFALTEPQAGSEAHNLRTRAELV-DGQWVLNGSKQFCSNAKRAKLAIVFAVTDPDLG 178

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302
           + G   FLVP         G   +R ++K+G R++ T  +  S       N  G     L
Sbjct: 179 KKGLSAFLVPT-----DTAGFAVERSEHKMGIRASDTCAVSLSDCRIPQANLLGERGKGL 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   +E  +I I       ++   R +   A+ YAR R   G  + +   +   +AD+
Sbjct: 234 AIALSNLEGGRIGI----GAQALGIARAAFEAALLYARERVQFGKPIAEHQSIANMLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L    A           EA+ A++ A        +MA  V ++A++  GG 
Sbjct: 290 QTQLNAARLLILHAARLKSAGLPCLSEASQAKLFAS-------EMAEKVCSQAVQIHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+E+  + R+YR++    I  GS
Sbjct: 343 GYLEDYPVERYYRDARITQIYEGS 366


>gi|111018929|ref|YP_701901.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818459|gb|ABG93743.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 382

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 16/243 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+  + +    I DG  Y ++G K F++S +   F++ A   G  G   V
Sbjct: 124 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGSKTFITSAVRADFVVTAVRTGGPGASGV 181

Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             L +E G+P G    R  +K+G R++ T EL F +       L+G+ N     +    +
Sbjct: 182 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPAANLVGEENSGFAQIAQAFL 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A  + S  +  L   + + R R   G  LI +  ++  + ++A     A   + 
Sbjct: 241 TERIALAAQAYSSAQRCLDLTLQWVRDRETFGRPLISRQSVQNTVTEMARKTDVARVYTR 300

Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            L   S    +    E  +A+  A     W          +A++  GG GY+ E  + R 
Sbjct: 301 ALVERSLVSNEDFIAEVCFAKNTAVEAGEWVAN-------QAVQLFGGLGYMRESEVERQ 353

Query: 434 YRE 436
           YR+
Sbjct: 354 YRD 356


>gi|55981113|ref|YP_144410.1| acetyl-coenzyme A dehydrogenase, medium chain [Thermus thermophilus
           HB8]
 gi|55772526|dbj|BAD70967.1| acetyl-Coenzyme A dehydrogenase, medium chain [Thermus thermophilus
           HB8]
          Length = 410

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D AA+ ++  +  D  Y L+G K W  +   ++  ++ A 
Sbjct: 143 PLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 201

Query: 249 VEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           V   +    +V  ++E G+P G    ++  K+G R++ T EL F +              
Sbjct: 202 VNPELRHKGVVALVVERGTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 260

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F   +  LN +  PV           A  SV   R +L EA  YA+ R   G  + +  
Sbjct: 261 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEARKYAKERQAFGQPIANFQ 309

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     
Sbjct: 310 AIQFKLADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 362

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY+ E  + +  R+   N I  G+
Sbjct: 363 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 395


>gi|262376318|ref|ZP_06069548.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308919|gb|EEY90052.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 125/291 (42%), Gaps = 36/291 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S EY              +G L ++E   G+D+ ++  + +   D  
Sbjct: 108 TEEQKQRYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLKAEDKGD-H 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +   +D  ++ A+ + + G   +   L + +  G  +    +K+G R +
Sbjct: 153 YLLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLVEKNMPGFSHGTHLDKLGMRGS 212

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHY 338
            T  L F N     +   NV  G     K+L+     + A++S      M   +   I Y
Sbjct: 213 NTYPLFFDNV---EVPKENVMGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACMDTVIPY 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRS--EEAAYARI 395
              R   G  L +  +M+  IAD+     A  AL + +    D+A+ SRS  ++AA A +
Sbjct: 270 IHDRKQFGQALGEFQLMQGKIADMYSTWLACKALVYAVGAECDKAEHSRSLRKDAASAIL 329

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A     W       +  E ++ +GG+GYI E +  R +R++    I  G+
Sbjct: 330 YAAEKATW-------MAGETIQTLGGNGYINEFAAGRLWRDAKLYEIGAGT 373


>gi|257057322|ref|YP_003135154.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587194|gb|ACU98327.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 386

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 29/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256
           L+E   G+D AA++++ ++  D  Y ++G K W      +D +  + +     G    C 
Sbjct: 131 LSEPHAGSDAAALSTRARRDGDA-YVVNGVKAWTTHGGQADYYTTMVRTSDDGGKGISCL 189

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
           LV     D    G+     + K+G   + T ++ F +         G     L ++   +
Sbjct: 190 LV-----DADTPGMSAAPPERKMGLTGSTTAQMIFEDARVDADRLIGAEGEGLRIALSSL 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              ++ I    A  SV   + +L EA+ YA++R   G  +ID   ++  +AD+A  + +A
Sbjct: 245 ASGRLGI----AACSVGLAQAALDEAVAYAKQRTQFGKPIIDFQGLEFLLADMAAAVESA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A     A   D      ++++ A+++A          A  V  +A++  GG+GY  +  
Sbjct: 301 RATYLDAARRRDRGLPFQKQSSIAKLVA-------TDAAMKVTTDAVQVFGGAGYTRDFP 353

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R+ RE+    I  G+     L +   L K
Sbjct: 354 VERYMREAKVPQIFEGTNQIQRLVIARELRK 384


>gi|242808836|ref|XP_002485246.1| electron transport oxidoreductase, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715871|gb|EED15293.1| electron transport oxidoreductase, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 138/334 (41%), Gaps = 57/334 (17%)

Query: 202 LTEKRGGTDIAAITS-----------QGQKISD---GIYCLSGHKWFLSSPMSDAFIMLA 247
           +TE+ GG+D++   +           +G+  S    G++ + G KWF S   S   ++LA
Sbjct: 1   MTERTGGSDVSGTETVAYLSPENERQEGKDASGFELGLWEIDGFKWFSSGTESMMTMLLA 60

Query: 248 QVEGRVGCFLVP--RLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +    +  F  P  R   D         N +  QRLKNK+G R+N T ELE      +L 
Sbjct: 61  RTTKGISLFYAPMRRKTMDQFGNTTTQLNCIRIQRLKNKLGTRANTTAELELKGMRAWL- 119

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGGILIDQPVM 355
                    +E+    I   + ++SV+ + +++    ++AR     R  S  +L  + V 
Sbjct: 120 ---------IEEEGNGIKQVTQVLSVTRLHIAINCLGNWARGLAASRAYSKSVLAKEHVK 170

Query: 356 KRAIADIALDIA-----AATALSFRLANS---FDEAKSRSEEA-AYARIMAPITKYWCCK 406
            R I  + L+ A     A+  L      S   F+    R E+     R++    K    +
Sbjct: 171 YRGIW-MLLNFASPFLGASENLPSEKETSKEPFELLPERPEDVLLLLRVLTSPIKGVSAR 229

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG---------NAMVLDVLNL 457
            +   + E +E +GG GY+E        RE     +LLGS          + ++ D  + 
Sbjct: 230 ASIHGLLECIEFLGGVGYLENERWISTLRECTV--MLLGSAVMDCLNRWIHRILQDTFDA 287

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           L+      E  +S+L+Q +  S K  + +  + I
Sbjct: 288 LQSVIENLETQWSSLQQTIKESDKVTLMVNANEI 321


>gi|126735618|ref|ZP_01751363.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126714805|gb|EBA11671.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 378

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 12/255 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  + + G Y L+G K F+S    SDA+I++A+        +   
Sbjct: 124 LTEPGSGSDAAALKTKAIRDNAG-YQLTGTKAFISGGGYSDAYIVMARTSDDGPKGISAI 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           ++EDG+ +GL +  L++K+G RS  T +++  N       LLG+  +             
Sbjct: 183 IVEDGA-DGLSFGGLEDKMGWRSQPTRQVQMDNCPAPADNLLGEEGMGFKYAMAGLDGGR 241

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  S+   + +L + + Y   R   G  +     ++  +AD+ + + +A     + A
Sbjct: 242 LNIAACSIGAAQSALDQTVAYMAERKAFGKPIDQFQGLQFRLADMEIALQSARTFLRQAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+       A  A     + K  C +    V  + ++  GG GY+ +  I +  R+ 
Sbjct: 302 WKLDQG------APDATKFCAMAKKLCTETGSDVADQCLQLHGGYGYLADYGIEKIVRDL 355

Query: 438 PANSILLGSGNAMVL 452
             + IL G+   M L
Sbjct: 356 RVHQILEGTNEIMRL 370


>gi|23014213|ref|ZP_00054042.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 554

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 27/266 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM----------LAQ 248
           LTE + G+D+  + +     +DG + +SG K F+S     ++   IM           A 
Sbjct: 158 LTEAQAGSDLGLVRTMASPQADGSWSISGGKIFISGGDQNLTGGKIMHLVLARTPDAPAG 217

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           V+G +  FL P  L+DG+ N +   RL+ K+G  ++ T ++ F      ++G        
Sbjct: 218 VKG-LSLFLCPSHLDDGTRNAIQVVRLEEKMGMHASPTCQVAFDGAKAEIIGAPGEGLAR 276

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGGILIDQ--PVMKRAIA 360
           +  M     LD A+  V    V+L  ++ YA  R        +G   I +   V +  + 
Sbjct: 277 MFTMMNAERLDVAVQGVGLAEVALQRSLAYANERKQGRAGKDAGPDFIAKHGDVRRMLLT 336

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +AL +    A+  R     +      E+ A   +M P+ K +  + A      A++  G
Sbjct: 337 QMALAM-GCRAMVMRTLVDLE----LGEKPALMELMTPVCKAFATEAAMEAADHAIQVHG 391

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G++ E  + +  R+     I  G+
Sbjct: 392 GYGFLREYRVEQILRDGRITRIYEGT 417


>gi|145225190|ref|YP_001135868.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217676|gb|ABP47080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 392

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 27/249 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+A I +  ++  D  Y ++G K F++S +   F+  A   G  G   + 
Sbjct: 137 LGITEPDTGSDVAGIRTTARRDGDH-YVVNGAKLFITSGVRADFVTTAVRTGGPGPSGIS 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L+ +    G    R   K+G   + T EL F++    ++  +         +     ++
Sbjct: 196 LLVVERGATGFLVSRALKKMGWLCSDTAELGFTDVRVPVVNLVGPEGSGFLQIMQQFQVE 255

Query: 320 SAIMSV---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            A ++V   +  +  L   + + ++R   G  L  + V++  I DIA             
Sbjct: 256 RAFIAVQCYATAQRCLDLTLDWVKKRETFGRPLSTRQVVRHKIVDIA------------- 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA--------MECIGGSGYIEER 428
             + D A++ +  AA  RI+A  T      MA     EA        ++  GG GY+ E 
Sbjct: 303 -TAVDVARTYTR-AAVDRIVAGDTDVRMVSMAKNQAVEACALAVDTAVQLYGGMGYLRET 360

Query: 429 SIARHYRES 437
            + RHYR+S
Sbjct: 361 EVERHYRDS 369


>gi|149922016|ref|ZP_01910458.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149817181|gb|EDM76661.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 605

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 64/338 (18%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           A K+F+ E+  T    M  T    G  + + R      A+ ++G+    G++ L G K F
Sbjct: 154 AEKLFTGEWGGT----MCLTEAGAGSSVGDNR----TKAVPAEGEA---GVWLLEGEKIF 202

Query: 235 LSSPMSDAF-----IMLAQVEGR------VGCFLVPR-------LLEDGSPNGLCYQRLK 276
           ++   SD       ++LA+  G       +  FLVP+       L   G  NG    +L+
Sbjct: 203 ITGGDSDMVDNICHLVLARTPGSPEGTKGLSLFLVPKYWFSPDDLDALGDRNGAHVLKLE 262

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSG 327
           +K+G   +AT  L   +     G+++G         E M+++        L   +  ++ 
Sbjct: 263 HKMGINGSATCVLGLGSKMPCRGWMVGKER------EGMRLMFAMMNEARLGVGVQGLAA 316

Query: 328 MRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFR 375
              S   A HY   R     +            +++ P ++R +    + +    A ++R
Sbjct: 317 GSASFQYARHYVHERIQGTSLKNMRDGDAPRVKIVEHPDVRRMLMTQKVLVETMRAHAYR 376

Query: 376 LANSFDEAKSRSEE---AAYAR---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA  FD A    +E   A Y R   ++ PI K  C  +   V    ++  GG G+ +E  
Sbjct: 377 LALQFDIADEHPDEDTRAKYLRRAELLLPICKSVCTDLGFDVAVTGVQIFGGYGFTQEFP 436

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
           + +  R++   SI  G+     LD++   +  +G  LF
Sbjct: 437 VEQLVRDAKIQSIYEGTNGIQALDLVGRKMRMEGGRLF 474


>gi|118778933|ref|XP_308965.3| AGAP006780-PA [Anopheles gambiae str. PEST]
 gi|116132618|gb|EAA04728.3| AGAP006780-PA [Anopheles gambiae str. PEST]
          Length = 429

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P++D +++ A+ +        
Sbjct: 169 LAMSEAGSGSDVVSMKLRADKHGD-YYVLNGSKFWITNGPVADTYVIYAKTDTSAKPQHG 227

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V R        G       +K+G R + T EL F +     G +LG LN     +
Sbjct: 228 ITAFIVER-----GTAGFTQGPKLDKLGIRGSPTGELIFEDAKVPAGNILGGLNKGVYVL 282

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                L  L  A   V  M+ +   A  YA  R      + +  +++  +AD+   + A 
Sbjct: 283 MSGLDLERLVLAAGPVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNAC 342

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++ A   +       +C + A  V  +A++ +GG+GYI +  
Sbjct: 343 RAYLYSVARACDRGQANPKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYP 395

Query: 430 IARHYRESPANSILLGS 446
             R  R+     I  G+
Sbjct: 396 TGRIMRDCKLYEIGAGT 412


>gi|94314457|ref|YP_587666.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358309|gb|ABF12397.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 384

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 47/311 (15%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +V +   +A   TP + ++  PKI S       KA +        L ++E   G+D
Sbjct: 92  ITTSAVYAGMHIAKFGTPEMQQELIPKIIS------GKAKL-------ALCMSEPGTGSD 138

Query: 211 IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268
           +A + +  +   D  Y L+G+K W     ++D F+++ + +   G    +  LL D    
Sbjct: 139 VAGLKTYAEPAGDE-YILNGNKVWITCGHVADYFVVITRTDREGGRHQGISTLLVDAKAP 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+  + L+  +G R+    E+ F N     +   N+  G     K        IMS  G+
Sbjct: 198 GVTVRPLQ-MLGRRTTHANEVFFDNV---RVPAKNLFGGEGRAWK-------NIMSCLGL 246

Query: 329 -RVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            R+ LA             A  YA+ R   G  + D  V++  +AD+ +    A  + +R
Sbjct: 247 ERLGLAAISAGHCFKITEYARDYAKERVQFGKPISDFQVIQHKLADMLILSETARQVVYR 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A+  D  ++   EA+ A+++A    + C  +        M+ + G+GY  E  +   +R
Sbjct: 307 AADVLDAGQAAVTEASIAKVVASENNFKCADI-------GMQIMAGAGYSMEYDMQMFFR 359

Query: 436 ESPANSILLGS 446
           +S    I  G+
Sbjct: 360 DSRVGPIGGGT 370


>gi|300870661|ref|YP_003785532.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000]
 gi|300688360|gb|ADK31031.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000]
          Length = 367

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 40/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
            GLTE   GTD A    Q   + D     + ++G K F++ S  +D +++ A  +   G 
Sbjct: 109 FGLTEPNAGTDAAG--QQTTAVLDEATQEWVINGSKIFITNSGYADVYVIFAMTDKSQGL 166

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +   + +    G    + + K+G R +AT EL F N       LLG+L       +  
Sbjct: 167 KGISSFIVEKDTPGFTVGKKEKKLGIRGSATCELIFENARIPKENLLGELG------KGF 220

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           KI      A+M++ G R+ +A            E + Y + R   G  + +    +  +A
Sbjct: 221 KI------AMMTLDGGRIGIASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLA 274

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ + + AA  L ++ A         S +AA A++ A  T       A  V  +A++  G
Sbjct: 275 NLEVKVEAARLLVYKAAWRESNHLPYSVDAARAKLFASET-------AMEVTTKAVQLHG 327

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E  + R  R++    I  G+
Sbjct: 328 GYGYTREYPVERMMRDAKITEIYEGT 353


>gi|262281601|ref|ZP_06059379.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262256977|gb|EEY75717.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 385

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGAEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   S+ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANSIGGLETLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  S       ++A + K    ++   V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVS-------MLASMAKLKSGRLTREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|226356458|ref|YP_002786198.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226318448|gb|ACO46444.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 400

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252
           GLTE   G+D   + S+  +  DG + L+G K F++   +   +++LA+     EG+   
Sbjct: 135 GLTEPGSGSDSGGMQSRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDAAREGKGKN 194

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  F+  R        G    R ++K+G RS+ T +L F +       LLG+   +  
Sbjct: 195 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFK 250

Query: 308 PVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            V  MK+   LD   + ++ M     R +   A  Y   R   G  +     +   +AD+
Sbjct: 251 DV--MKV---LDGGRVGIAAMGLGLGRAAFEYAAKYTMTREQFGKPIGHNQNLAFRLADM 305

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L  + A+  D  ++ +   A A++ A       C        EA++ +GG 
Sbjct: 306 DTKLEAARLLIRKAADLKDAGQNFTVPVARAKLFATTVGVEACD-------EAIQMLGGY 358

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI+E  + R +R++    I  G+
Sbjct: 359 GYIKEYPVERFWRDNRLTRIGEGT 382


>gi|150020551|ref|YP_001305905.1| acyl-CoA dehydrogenase domain-containing protein [Thermosipho
           melanesiensis BI429]
 gi|149793072|gb|ABR30520.1| acyl-CoA dehydrogenase domain protein [Thermosipho melanesiensis
           BI429]
          Length = 380

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 18/274 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K +      LTE   GTD AA      K+    Y L+G K F+++  ++D +I+ A 
Sbjct: 113 PLVKGAKIGAFALTEPNAGTD-AANQQTTAKLQGENYILNGTKIFVTNGGVADIYIVFAT 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +G   +   + +    G    +++ K+G R + T E+   N    ++   N+    
Sbjct: 172 TNRELGTKDISAFIVEKDFEGFKIGKVEEKMGIRGSMTTEIVLENC---MVPKENLLGAE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI L  LD   + V+   + +AE      + Y + R      L     ++  IA++
Sbjct: 229 GEGFKIALKTLDGGRIGVAAQALGIAEGAIDEVLKYVKERKQFNRPLSSFQGLQWYIAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  AA  L +  A   D+   +S +A+ A       K +    A  V  +A++  GG 
Sbjct: 289 ITNTRAAKLLVYDAALKKDKGLLKSADASMA-------KKFASDNAMFVTTQAVQIFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY+++  I R  R++    I  G+     + + N
Sbjct: 342 GYMKDYPIERMMRDAKITQIYEGTNEVQKMVIAN 375


>gi|116694310|ref|YP_728521.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528809|emb|CAJ95156.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 389

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 33/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A I+ +  +  D  + ++G+K++ +      FI+   V  R    + P+ 
Sbjct: 123 LSEPNAGSDVANISCRAVRNGDE-WVITGNKYWCTFADEADFIL---VICRTDAVIDPKA 178

Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303
              G        P G   + +K     KIG     T EL F         ++GD      
Sbjct: 179 RHKGLSAFMVEKPRGALPEGVKGSVIPKIGYHGWTTWELAFDGCRVPHSKMVGDEGKAFY 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++T  +E  +      +A  S+   + +L ++I YAR R   G  + +   ++  IAD+A
Sbjct: 239 LATAGLEAARA----HTAARSIGLAQGALEDSIQYARDRAQFGSPIGNFQAIRFKIADMA 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA AL + +    D+      EA+  ++ A        +M   V +E ++  GG+G
Sbjct: 295 TQIEAARALLYSVCEKIDDGGRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y    +  R++R++    I  G+
Sbjct: 348 YTTHFAAERYWRDARLTKIFEGT 370


>gi|86741126|ref|YP_481526.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86567988|gb|ABD11797.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 385

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + LTE  GG+D+ A+T+  ++  +  Y ++G K W  ++  S    +L + + +      
Sbjct: 121 MALTEPAGGSDLQALTTSARRAGEH-YVVNGSKTWITNARRSQLIALLCRTDPKA----E 175

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
           PR       L+E G  +G    R   K+G +   + EL F +       LLG      G 
Sbjct: 176 PRHKGISILLVEPG--DGFTVSRDLPKLGYKGVESCELSFDDYHVPVDALLGG-EEGRGF 232

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + MK L    +  A  ++   R +L +A+ YA+ R   G  +     +   +AD+A   
Sbjct: 233 AQMMKGLEIGRIQVAARALGVARAALDDALRYAQEREAFGKPIWKHQSIGNYLADMATKY 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A+ +D       EA  A++ A  T       A  +   A+   GG GY  
Sbjct: 293 TAARQLVLLAADRYDAGDRCDLEAGMAKLFASET-------AMEIALNAVRVHGGYGYST 345

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 346 EFDVERYFRDAPL--MIIGEGT 365


>gi|309789696|ref|ZP_07684276.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308228182|gb|EFO81830.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 391

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGRVG 254
           LTE   G+D A + +  +   D  + L+G K W  +   +D  ++ A         G + 
Sbjct: 125 LTEPNAGSDAAHLQTTAELHGDE-WVLNGQKMWITNGSFADVIVVHAVNDRHKGARGGIT 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVE 310
            F+V    E  +P G    ++++K+G +++ T  L F +        + G   V  G   
Sbjct: 184 AFIV----EKDTP-GFRVGKVEHKMGLKASHTASLFFEDCRVPAENVIGGAHGVGHGFPL 238

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +     SV G + +   +  YA  RH  G  L D   ++  +A++A+ I  
Sbjct: 239 AMKTLDIGRVGLGGSSVGGAKEAFELSRKYAVERHQFGRALADFQAIQFKLAEMAVKIYT 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              + +  A   D  K  + E++       I K +C +MA  VI EA++  GG G+  E 
Sbjct: 299 MEQIVYDCARRVDAGKPATLESS-------IVKLYCTEMASQVIDEAIQIYGGMGFSREV 351

Query: 429 SIARHYRESPANSILLGS 446
            + R YR++    I  G+
Sbjct: 352 PLERMYRDARVTRIFEGT 369


>gi|149185275|ref|ZP_01863592.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21]
 gi|148831386|gb|EDL49820.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21]
          Length = 579

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 45/296 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQV- 249
           + LTE + G+D+ A+ +  + I++G     + + G K +++     +++  I  +LA++ 
Sbjct: 161 MNLTEPQAGSDVGALRTTAKPITEGEHTGKFLIKGQKIYITWGEHELAENIIHLVLARLP 220

Query: 250 ---EGRVGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
              EG  G   F VP+  +  DGS    N L    L++K+G  ++ T  + + +     G
Sbjct: 221 DAPEGSRGISLFTVPKYHVKPDGSLGAHNDLRCVSLEHKLGINASPTCVMSYGDNDECIG 280

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348
            L+G  N     +  M     +++A ++V    V + E     A+ YA+ R  S      
Sbjct: 281 ELVGTENRGLAAMFTM-----MNNARINVGNQGVQIGERATQQALDYAKERVQSARAGSP 335

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPIT 400
                 +I+ P ++R +  +      A A+ +  A   D      +EAA AR  ++ P+ 
Sbjct: 336 DKAAVSIIEHPDVRRMLLRMKALTEGARAVLYYTAGQVDRG-VLGDEAAKARGEVLTPLI 394

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K W   +   V +  ++  GG G +EE   A+H+R+S    I  G+      D++ 
Sbjct: 395 KAWGTDIGIEVASLGIQVHGGMGLVEETGAAQHWRDSRIAPIYEGTNGIQAADLVT 450


>gi|260466647|ref|ZP_05812835.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029653|gb|EEW30941.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 398

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 23/243 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ +K +DG Y L+G K W  ++P++D F++ A+++G  G   +
Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTADG-YKLTGSKMWISNAPIADVFVVWAKLKGDNGKDEI 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    GL   ++  K+  R++ T E+           LL +     GP       
Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 251 GCLNRARYGISWGAMGAAEDCWHRARQYGLDRKQFGKPLAGTQLFQKKLADMQTEIALGL 310

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE K   E       M  I K   C  A  +  +A +  GG+G      +
Sbjct: 311 QGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363

Query: 431 ARH 433
            RH
Sbjct: 364 MRH 366


>gi|227820315|ref|YP_002824286.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227339314|gb|ACP23533.1| probable acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 18/260 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y L+G K F+S        ++    G  G   +   
Sbjct: 126 LTEPGSGSDAAALKTKAVRDGDA-YLLTGQKQFISGAGESGLYIVMARTGEEGPKGISAF 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + D    GL +   + K+G  +  T       V +  +N  G       ++   ++  ++
Sbjct: 185 VVDKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVPAANRLGAEGEGFRIAMAGLDGGRL 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G + +  +A+ Y   R   G  + +   ++  +AD+A D+  A    +
Sbjct: 245 NI----AAASLGGAQAAFDKALAYVAERRAFGKAIGEFQALQFRLADMATDLEIARTFLW 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D +   + +      +  + K +      AV  +A++  GG GY+ +  + +  
Sbjct: 301 RAASALDASDPDATK------LCAMAKRFVTDRCFAVANDALQLHGGYGYLADYGVEKIV 354

Query: 435 RESPANSILLGSGNAMVLDV 454
           R+   + IL G+   M L V
Sbjct: 355 RDLRVHQILEGTNEIMRLIV 374


>gi|221481999|gb|EEE20365.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
          Length = 409

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 31/288 (10%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------- 247
           A+G L ++E   G+D+  + SQ  +  DG Y L G K W  +  ++D  I+ A       
Sbjct: 128 AVGALAMSEPEAGSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEI 187

Query: 248 -QVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            +V  + G    +   ++E+G  +GL   +  +K+G R + T  L F +     +   N+
Sbjct: 188 QEVPAKAGSSRSVTAVIVENGM-DGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNI 243

Query: 305 STGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                +  KIL+  LDS  + ++      M   L   + Y   R   G  + +  +M+  
Sbjct: 244 LGTTGDGAKILMSGLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGK 303

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+        A  + +A S+ E  +   + A + +        C + A  V  + ++ 
Sbjct: 304 LADVYSAFITHRAFLYSVARSYSEGSAGRADCASSILC-------CAEKATQVALDTIQM 356

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +GG+GY  E    R  R+S    I  G+G + +  +L   E  T   E
Sbjct: 357 LGGNGYTNEYPAGRLLRDSKLYEI--GAGTSEIRRMLIARELNTRFRE 402


>gi|172037990|ref|YP_001804491.1| AMP-dependent synthetase and ligase, acyl-CoA synthase [Cyanothece
            sp. ATCC 51142]
 gi|171699444|gb|ACB52425.1| AMP-dependent synthetase and ligase, probable acyl-CoA synthase
            [Cyanothece sp. ATCC 51142]
          Length = 1275

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 122/308 (39%), Gaps = 53/308 (17%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGR--- 252
              LTE   G++  AITS    +S   + L+G K W  S+  +   + F+     +G+   
Sbjct: 716  FALTEPSAGSNPQAITSSAMPLSSDKWVLNGTKIWSGSAAWAGVINVFVQQKDAQGKFQG 775

Query: 253  VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
            +  F V R    G+P GL        +G R      +  +N   +    LGD        
Sbjct: 776  ISSFAVRR----GTP-GLKQGPEALTLGMRGMVQNTVYLNNVPVSASQQLGDPGEGMKVA 830

Query: 310  EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +D  +   L  A  SV GM+        Y+ RR +S G L+D P++   +  +   I   
Sbjct: 831  QDAMMYGRLAIAAASVGGMKRCAQLWHRYSSRRQISTGRLLDNPLVLARLNGLTAAITTV 890

Query: 370  TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGY 424
              L   +A   D+ +             PI  Y  CKM AP    +A    ++ +GG GY
Sbjct: 891  ETLVTSIAQLLDQGQE-----------VPIEAYTVCKMAAPEFYWQAADNLVQFLGGRGY 939

Query: 425  IEER---SIARHYR-----ESPANSI--LLGSG--------NAMVLDVLNLLEKGTNLFE 466
            IE      I R  R     E P  ++   LGS           ++ D L + E    ++E
Sbjct: 940  IETNIAPQILRDARVLRIFEGPTETLTAFLGSRLIYQPKGLKRLLRDTLGVPE----IYE 995

Query: 467  QLFSTLEQ 474
            QL  T+EQ
Sbjct: 996  QLQQTVEQ 1003


>gi|158316346|ref|YP_001508854.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111751|gb|ABW13948.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 384

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGC-FL 257
            GLTE   G+D  A+ +  +  SDG Y ++G K ++++ +   F I+ A+V    G    
Sbjct: 123 FGLTEPGAGSDAGALRTTARASSDG-YVVNGSKLYITNALGCDFGILFARVIDHDGTDHG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V  LL D + +      + + +  RS  + EL F +TF   +   NV       + + + 
Sbjct: 182 VSALLVDAAESEFGVHDIPH-MPLRSTTSCELSFHDTF---VPAANVLGTLGGGLSLGMK 237

Query: 318 ------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A+ +V   +  L  +I + R+R   G  +    ++++ + +IA     +  
Sbjct: 238 AVNAGRLNMAMGAVGLSQACLEASIAFCRQREQFGKPIAAFQLIQQMVVEIATLTETSRL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A + D  +    E + A       KY+C + A      A++  GG+G +EE  + 
Sbjct: 298 LGYNAARAIDAGEPGRYECSMA-------KYYCGESAGRAATLALQVHGGAGLMEESPVE 350

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R++R++   +I  G+    +L
Sbjct: 351 RYFRDAREATIPEGTSQIQIL 371


>gi|118617473|ref|YP_905805.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99]
 gi|183982286|ref|YP_001850577.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M]
 gi|118569583|gb|ABL04334.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99]
 gi|183175612|gb|ACC40722.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M]
          Length = 609

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 47/296 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S   + D       ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTSENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G  NG+    L++K+G +S+ T E+ F  T     G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLEHKMGLKSSPTCEVTFGATDVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ YA+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSSGTLSTGYLNALAYAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D+A ++    A          ++ 
Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           P+ K    + A  ++ E+++ +GGSG++ +  I ++ R++  +S+  G+     LD
Sbjct: 401 PVVKGVGSERAYEILTESLQTLGGSGFLSDYPIEQYIRDAKIDSLYEGTTAIQSLD 456


>gi|111023060|ref|YP_706032.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822590|gb|ABG97874.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-RVGCF 256
            GLTE   G+D A  T    K   G + ++G+K F+++  +D    + +  V G + G  
Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGTKDGKK 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            +  +L   S  G   +   NK+G  ++ T  L FS        D+ V   P E++    
Sbjct: 187 EISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFS--------DVRV---PEENLLGER 235

Query: 313 -----KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  L  LD   ++++ + V  A     E++ YA+ R   G     +P+       I
Sbjct: 236 GRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFG-----RPIGHNQA--I 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  IA   A +     ++ +A +R       +  A I K    + A     +A +  GG 
Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAAIAKLVASEAAMDNARDATQIHGGY 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G++ E ++ARHYR+S    + +G G   V  +L   E G
Sbjct: 349 GFMNEYTVARHYRDS--KILEIGEGTTEVQLMLIAREAG 385


>gi|159897777|ref|YP_001544024.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890816|gb|ABX03896.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 415

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           LTE   GTD+A + S      D  Y L+G K W   S ++D F+++A  +       +  
Sbjct: 140 LTEPNAGTDVAGMQSTAVLEGDH-YILNGEKTWISLSDLADHFLVVAYTDKSKKQRGMTA 198

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+V R  E     G+    +  K+G R+  T  + F N    +   L       E  KI 
Sbjct: 199 FIVERSFE-----GVSTMPIHGKLGVRAGNTGSVVFENVRVPVANRLGEEG---EGFKIA 250

Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD+   +V+      ++ +L  ++ YA+ R   G  +    ++KR I+ + L +  A
Sbjct: 251 MTALDNGRYTVATGATGLIQAALEASVKYAKERETFGVPIGQHQLVKRMISHMVLKLETA 310

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R     ++    + E   A+  A +  + C         +A++  G  G+ +E  
Sbjct: 311 RLLCYRAGWLKNQGIRNTRETTLAKWHATVESFNCAN-------DAIQIHGAYGFSDEYP 363

Query: 430 IARHYRESPANSILLGS 446
           + R+ R S    I  G+
Sbjct: 364 VERYLRNSRGAVIYEGT 380


>gi|313886290|ref|ZP_07820016.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332299782|ref|YP_004441703.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
 gi|312924235|gb|EFR35018.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176845|gb|AEE12535.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
          Length = 379

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E    +  P   +   IG  GLTE   GTD +A  +   +  +  Y L+G+K F++ 
Sbjct: 101 FGTEEQKQHYLPKLASGEWIGAFGLTEPNAGTDASAQQTFAVE-EEECYILNGNKIFITN 159

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           +  +  +I+ A  +   G   +   + +    G    + + K+G R +AT EL   N   
Sbjct: 160 AEYAHVYIIFAMTDKSKGNKGITAFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRI 219

Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                 G + G   V+   ++  +I I    A  ++   R ++ E + Y + R   G  +
Sbjct: 220 PKDRLLGKVGGGFKVAMHTLDGGRIGI----AAQALGIARGAMDETVKYTKERKQFGRSI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +AD+   I  A+ L  R A   D   S + EAA A++       +C + A 
Sbjct: 276 AKFQNTQFQLADLKARIDCASLLVRRAAWCKDNGLSYNLEAAEAKL-------FCAETAM 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 329 DMTTKAVQFHGGYGYTREYPVERMMRDAKITEIYEGT 365


>gi|226953996|ref|ZP_03824460.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835247|gb|EEH67630.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 393

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 116 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 160

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 161 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKDMKGFSHGNHLDKLGMRGSNTYPL 220

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N       +LG   V  G    M  L Y + A++S      M   +   I Y  +R 
Sbjct: 221 FFDNVEVPVENVLG--GVGNGAKVLMSGLDY-ERAVLSAGPLGIMDACMDVVIPYLHQRE 277

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 278 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 338 ATW-------MAGEAIQTLGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|226365563|ref|YP_002783346.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244053|dbj|BAH54401.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-RVGCF 256
            GLTE   G+D A  T    K   G + ++G+K F+++  +D    + +  V G + G  
Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGTKDGKK 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            +  +L   S  G   +   NK+G  ++ T  L FS        D+ V   P E++    
Sbjct: 187 EISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFS--------DVRV---PEENLLGER 235

Query: 313 -----KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  L  LD   ++++ + V  A     E++ YA+ R   G     +P+       I
Sbjct: 236 GRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFG-----RPIGHNQA--I 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  IA   A +     ++ +A +R       +  A I K    + A     +A +  GG 
Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAAIAKLVASEAAMDNARDATQIHGGY 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G++ E ++ARHYR+S    + +G G   V  +L   E G
Sbjct: 349 GFMNEYTVARHYRDS--KILEIGEGTTEVQLMLIAREAG 385


>gi|94984919|ref|YP_604283.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555200|gb|ABF45114.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 393

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR- 252
           GLTE   G+D   + ++  +  DG + L+G K F++   +   +++LA+ +      G+ 
Sbjct: 128 GLTEPGSGSDSGGLQTRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDPPRPGKGKN 187

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  F+  R        G    R ++K+G RS+ T +L F +       LLG+   +  
Sbjct: 188 DGISAFVFNR----DEVTGFSIGRKEDKLGLRSSDTAQLIFEDVHLPQDALLGERGNAFK 243

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362
            V  M++L   D   + +  M + L  A       YA  R   G  +     +   +AD+
Sbjct: 244 DV--MRVL---DGGRIGIGAMGLGLGRAAFEFAARYALEREQFGKPIAMNQAIGFKLADM 298

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L  + A+  D  ++ +  AA A++ A       C        +A++ +GG 
Sbjct: 299 DTQLEAARLLLRKAADLKDAGENFTVAAARAKLFATNVGVQACD-------DAIQILGGY 351

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI+E  + R++R++    I  G+
Sbjct: 352 GYIKEYPVERYWRDNRLTRIGEGT 375


>gi|254773971|ref|ZP_05215487.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 18/263 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  
Sbjct: 242 ERIGLATQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +       ++    +  +A+  A     W       V  +A++  GG GY+ E  + R Y
Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354

Query: 435 RESPANSIL-LGSGNAMVLDVLN 456
           R      IL +G G   +L  L+
Sbjct: 355 R---GMRILGIGGGTTEILTALS 374


>gi|313760586|ref|NP_001186490.1| isovaleryl-CoA dehydrogenase, mitochondrial [Gallus gallus]
          Length = 422

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------G 251
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  I+ A+ +        
Sbjct: 161 LAMSEPNAGSDVVSMKLKADKKGD-YYVLNGNKFWITNGPDADVLIVYAKTDLNAVPASQ 219

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F+V    E G P     Q+L +K+G R + T EL F +       +LG L+     
Sbjct: 220 GITAFIV----EKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAENILGKLSKGV-- 272

Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                ++  LD   + +SG     M+  L  AI Y   R   G  +    +M+  +AD+ 
Sbjct: 273 ---YVLMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMY 329

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A     + +A + D+    +++ A   +       +  + A  V  + ++C+GG+G
Sbjct: 330 TRLMACRQYVYNVAKACDQGHFNAKDCAGVIL-------FSAECATQVALDGIQCLGGNG 382

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           YI +  + R  R++    I  G+G + V
Sbjct: 383 YINDYPMGRFLRDAKLYEI--GAGTSEV 408


>gi|75677199|ref|YP_319620.1| Acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74422069|gb|ABA06268.1| isovaleryl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 407

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++  +  D  Y L+G K W  +  ++D  ++ A+ +   G   +
Sbjct: 148 LAMSEPGAGSDVISMRTRADRKGD-RYILNGSKMWITNGTIADTLVIYAKTDAAAGARGI 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +   NG    +  +K+G R + T EL F +       +LGD       +  M  L
Sbjct: 207 TAFILEKGMNGFSTAQKLDKLGMRGSDTCELVFEDCEIPEDNVLGDAGRGVNVL--MSGL 264

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++      M+  +   + Y R R   G  +    +++  +AD+ + + A  A 
Sbjct: 265 DY-ERAVLAAGPLGIMQACMDMVMPYVRERKQFGQPIGSFQLVQAKVADMYVTMNACRAY 323

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   E+AA A I+    K   C +      +A++ +GG+GYI +    R
Sbjct: 324 VYAVAKACDRGEITREDAAGA-ILYSAEKATQCAL------DAIQLLGGNGYINDYPAGR 376

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 377 LLRDAKLYEI--GAGTSEIRRML----IGRELFEK 405


>gi|317123441|ref|YP_004097553.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587529|gb|ADU46826.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 620

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 58/305 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S  SD        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAIQQPDGTWHIEGVKRFITSAESDLVDNIVHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+   D      G  NG     +++K+G + + T E+ F +     G LLGD
Sbjct: 224 KGLSLFIVPKFHVDLETGELGERNGAYVTNVEHKMGLKVSTTCEVTFGDKEPAVGTLLGD 283

Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351
           ++         +E+ ++ +       +++ +      A+ YA++R V G  L        
Sbjct: 284 VHDGIAQMFHVIENARMFV----GTKAIATLSTGYLNALEYAKQR-VQGADLTQMTDKTA 338

Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEA 390
                   P ++R++           AL    A   D              E  S +E A
Sbjct: 339 PRVTITHHPDVRRSLMLQKSYAEGLRALVLYTATQLDTVAQAQNGNRTVAVEKGSDAELA 398

Query: 391 A-YARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  + ++ PI K    + A  ++  E+++ +GGSG++++  I ++ R++  +++  G+  
Sbjct: 399 SRVSDLLLPIVKGLGSERAWVLLGTESLQTLGGSGFLQDYPIEQYVRDAKIDTLYEGTTA 458

Query: 449 AMVLD 453
              LD
Sbjct: 459 IQGLD 463


>gi|306820875|ref|ZP_07454495.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550989|gb|EFM38960.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 379

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 30/270 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D +A  +   K  D  Y L+G K F++ + ++D +++ A  +   G   +
Sbjct: 121 FALTEPGAGSDASAGKTTAVKDGDS-YVLNGRKCFITNAEVADVYLITAMTDKEAGVKGI 179

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
              L+E G+P GL     ++K+G R+        SNT   +L D  +    +     E  
Sbjct: 180 SMFLVEKGTP-GLSTGNHEDKMGIRT--------SNTADVVLEDCRIPAANLVGKEGEGF 230

Query: 313 KI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD A      ++    + +L EAI Y + R   G  +I    M+   AD+ + I
Sbjct: 231 KIAMKTLDQARTWMGCVATGIAQRALDEAIAYTKERKQFGKPIIKNQAMQFKFADMQIKI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +        D   + S E+A       I K +   +A  V ++ ++  GG GY  
Sbjct: 291 ETARQMVAHSLTKMDMGLNFSMESA-------IAKCYASDIAMEVASDGIQAFGGYGYSR 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E  + +  R++    I  G+   + + V N
Sbjct: 344 EYPVEKLLRDAKIFQIFEGTNEILRIVVSN 373


>gi|296165479|ref|ZP_06848012.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899170|gb|EFG78643.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 49/302 (16%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223
           +T+    + W P+  S E               IG L +TE   G+D+ AI +  ++  D
Sbjct: 104 LTSEEQKQRWLPRFASGEL--------------IGALAMTEPGAGSDLRAIRTSARRDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+SS  MSD  ++ A  +   G       + +    G    R  +KIG  
Sbjct: 150 H-WVLNGQKTFISSGIMSDLIVVAACTDQEAGSRGFSLFVVERDTPGFRRGRQLDKIGLP 208

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA 333
           +  T EL F +           +  PVE++          ++ +L    + V+   ++  
Sbjct: 209 AQDTAELFFDD-----------ARVPVENLLGKEGSGLQYLMSHLPRERLGVTAQAIATT 257

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            AI      Y R+R   G  L  +  ++  +A+++ ++  A A   +   +F+  +    
Sbjct: 258 RAIFDLTVEYCRQRKAFGQPLTAKQHIRFELAEMSTELDIAEAYVDKSVEAFNAGELSPV 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA         K++  ++   +I   ++  GG GY+ E  +AR Y ++ A +I  G+  
Sbjct: 318 DAAKG-------KWYVSELQHRLIDRCLQLHGGYGYMLEYPVARAYLDTRAQTIYGGTTE 370

Query: 449 AM 450
            M
Sbjct: 371 IM 372


>gi|284045466|ref|YP_003395806.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283949687|gb|ADB52431.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 386

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 27/291 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           + T    + W P+  S E             +   +GLTE   G+D+AA+ +   +  DG
Sbjct: 103 LATEEQQERWLPRFCSGE-------------LVTAIGLTEPDAGSDLAALRTSAARDGDG 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            + ++G K F+++ +S   +++A     G  G  +    +E G+P G       +KIG  
Sbjct: 150 -WVINGSKTFITNGLSADLVVVAARTSSGERGKGITLFAVEHGTP-GFSRGAKLDKIGQV 207

Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
              T EL F +       ++G++++    + +      L +A  +++  R +L + + Y 
Sbjct: 208 EADTGELFFEDARVPAENVIGEVDMGFRLMMERLPQERLSAACSNLAHAREALDQTLRYV 267

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  IA++  ++    A         D   +      +  I A  
Sbjct: 268 DERRAFGRRIGSFQHIRFGIAELVTELDVTQAY-------VDRCLAAHAAGEFTAIDAAK 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            K+W  ++   V+   ++  GG GY+ E  +AR + ++    I  GS   M
Sbjct: 321 VKWWSAEVQNRVLDACVQYHGGYGYMREYDVARAWTDARVTKIWAGSNEIM 371


>gi|62510645|sp|Q8HXX8|GCDH_MACFA RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|23574728|dbj|BAC20590.1| glutaryl-CoA dehydrogenase [Macaca fascicularis]
          Length = 438

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E GR+  F
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGRIRGF 236

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG--DLNVSTG 307
               LLE G   GL   R++ K   R++AT       VE+   N    L G   L  S G
Sbjct: 237 ----LLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN---MLPGASSLGGSFG 288

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + + +  I    A   +      L  A  YA  R   G  L    ++++ +AD+  +I 
Sbjct: 289 CLNNGRYGI----AWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEIT 344

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                  +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E
Sbjct: 345 LGLHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDE 397

Query: 428 RSIARH 433
             + RH
Sbjct: 398 YHVIRH 403


>gi|94313352|ref|YP_586561.1| Butyryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357204|gb|ABF11292.1| acyl-CoA dehydrogenase(Butyryl-CoA dehydrogenase) [Cupriavidus
           metallidurans CH34]
          Length = 388

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 33/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A I+ +  +  D  + ++G+K++ +      FI+   V  R    + P+ 
Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGNKYWCTFADQSDFIL---VICRTDPVIDPKA 178

Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303
              G        P G   + +K     KIG     T EL F N       ++G+      
Sbjct: 179 RHKGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFY 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++T  +E  +      +A  S+   + SL ++I YA+ R   G  + +   ++  +AD+A
Sbjct: 239 LTTAGLETARA----HTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMA 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+ AL + +    DE      EA+  ++ A        +M   V +E ++  GG+G
Sbjct: 295 TQIEASRALLYTVCEKIDEGVRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y    +  R++R++    I  G+
Sbjct: 348 YTTHFAAERYWRDARLTKIFEGT 370


>gi|291522091|emb|CBK80384.1| butyryl-CoA dehydrogenase [Coprococcus catus GD/7]
          Length = 381

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 35/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG---- 254
            GLTE   G+D+A   +   K  D  Y ++G K F + S  +D F++ A  +   G    
Sbjct: 124 FGLTEPDAGSDVAGARTVAVKDGDE-YVINGSKIFTTNSGFADTFLVFALTDKAAGPHKG 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
              FLV R     +  G+  Q    ++G R  +  E+ +++       LLG      G  
Sbjct: 183 MSAFLVDR-----NTPGITVQPDIKRMGIRGASNSEVVYTDVRVPASDLLG------GEG 231

Query: 310 EDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  KI +  LD   + ++   V LA     EAI Y + R   G  +      +  IA++ 
Sbjct: 232 KGFKIAMKALDGGRIGIAAQSVGLAQGALDEAIAYCKERKQFGKPITAFQNTQFRIAELQ 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L++R A + D  +  +  AA A+++A       C+ A       ++ +GG G
Sbjct: 292 ARIDAARLLTWRAAVAKDNGEPYNVYAAEAKLVASDVANDVCRAA-------VQFMGGYG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y  E  + R  R+     I  G+   M +
Sbjct: 345 YCREYGVERKLRDVKITEIYEGTSEVMKM 373


>gi|260219862|emb|CBA26819.1| Probable isovaleryl-CoA dehydrogenase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 338

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 42/278 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253
           +G++E  GG+D+AA+ +  +K   G Y ++G K W  +   +D   +LA   EG V    
Sbjct: 77  IGVSEVTGGSDVAALKTTARK-DGGDYVINGSKMWITNGMQADWCCLLANTSEGAVHKNK 135

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301
              +VP         G+  Q+++ KIG  S+ T +L F N              GF+L  
Sbjct: 136 SLIIVPM-----DAPGITRQKIE-KIGMHSSDTAQLFFDNVRVPQRNLIGQEGMGFMLQM 189

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L       E+      L  A  S+  +   +   I Y R+R   G  +++  V+   +A+
Sbjct: 190 LQFQ----EE-----RLYGAASSLRSLDNLINLTIDYTRQRQTFGQPILNNQVVHFRLAE 240

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++    AL++R    +   K  ++ A+ A++ A        +++  V    ++  GG
Sbjct: 241 LRTEVECLRALTYRAVEQYVGGKDVTKLASMAKLKAG-------RLSREVTDSCLQYWGG 293

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            G+  +  I++ YR+S   SI  G  + ++L ++  LE
Sbjct: 294 MGFTADNPISQAYRDSRLISI-GGGADEIMLGIICKLE 330


>gi|260462066|ref|ZP_05810311.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032313|gb|EEW33579.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 31/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E R G+D+A       +  DG Y L+G K W  +  ++D +++ A+     G   +
Sbjct: 125 FALSEPRSGSDVANTEMTATRDGDG-YVLTGEKTWISNGGIADLYVVFARTGEAPGAKGL 183

Query: 259 PRLLEDGSPNGL-CYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              L  G   GL   +RL+    + +   S   V L  S   G           P +  +
Sbjct: 184 SAFLVPGDAKGLGIAERLEVIAPHPLARLSFDQVRLPASALIG----------KPGDGFR 233

Query: 314 ILIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I + +     S  G       R +L E+I     R + G  + +  +++  IAD+ALD+ 
Sbjct: 234 IAMSVLDVFRSTVGAAALGFARRALDESIKRVAERKLFGAPMGELQMVQGHIADMALDVD 293

Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L +R A + D   +R + EAA A++ A          A  VI +A++  GG+G  +
Sbjct: 294 AAALLIYRAAWTKDMGAARVTREAAMAKLFA-------TDKAQEVIDKAVQLHGGNGVRK 346

Query: 427 ERSIARHYRESPANSILLGSGN 448
              +   YRE  A  I  G+ +
Sbjct: 347 GHIVESLYREIRALRIYEGASD 368


>gi|302527299|ref|ZP_07279641.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436194|gb|EFL08010.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 28/270 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M +  +   + LTE  GG+D+ A+ +      DG Y ++G K ++S+      I L  + 
Sbjct: 111 MAEGRIRATMALTEPGGGSDLQAMRTHAVPGDDG-YTITGSKTWISNAAHSGLIGLLCIT 169

Query: 251 GRVGC----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDL 302
            R        +   L+E G  +GL   +   K+G R     EL F          L G  
Sbjct: 170 DREASPAHRGMSVLLVEPG--DGLTISKKLPKLGYRGVEACELVFDGRKVPADAVLGGTP 227

Query: 303 NVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           N   G  + M+ L    I + S  + V   + +L +A+ YA+ R   G  +     +   
Sbjct: 228 N--QGWSQMMRGLEVGRIQVASRALGVG--QAALNDAVRYAQERESFGKPIWKHQSVGNL 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  L+   A   D  +    EA  A++ A  T       A  V  +A+  
Sbjct: 284 LADMATKMRAARLLTLDAAEKLDAGERADMEAGMAKLFASET-------AMQVALDAIRV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448
            GG GY +E  + R++R++P   +++G G 
Sbjct: 337 HGGYGYSKEYDVERYFRDAPL--MIVGEGT 364


>gi|261419890|ref|YP_003253572.1| butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61]
 gi|319766705|ref|YP_004132206.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52]
 gi|261376347|gb|ACX79090.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61]
 gi|317111571|gb|ADU94063.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52]
          Length = 392

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
             +TE   G+D   I     K  D  + L+G K F++      F+M+  +          
Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQASN 184

Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           GR G  CF+V R           +   +P  L ++ ++       N   EL      G+ 
Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           LG              L ++  A   V    V  AE     AI YA+ R   G  + ++ 
Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD A++I AA  L    A + D+ +         R +A + K +   M   V+ 
Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             M+  GG GY +E  I R YRE+    I  G+     L +   L KG
Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384


>gi|86740944|ref|YP_481344.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567806|gb|ABD11615.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 383

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 62/318 (19%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   ++W P + S                    GLTE   G+D A  T    ++  G +
Sbjct: 104 TPAQREEWLPSLAS-------------GRALAAFGLTEPDAGSD-AGGTRTTARLDGGDW 149

Query: 227 CLSGHKWFLSSPMSDA--FIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++G K F+++  +D    + +  V GR       +   LVP +   G   G  Y    +
Sbjct: 150 IINGSKAFITNSGTDITRLVTVTAVTGRTPAGHKEISSVLVP-VPTPGFTAGPAY----S 204

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGM 328
           K+G  ++ T  L F         D+ V   P E++           L  LD   +++S +
Sbjct: 205 KVGWHASDTHPLTFD--------DVRV---PAENLLGARGRGFANFLQILDEGRIAISAL 253

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V LA     E++ YA++R   G      P+ +     IA  IA   A ++    ++ +A
Sbjct: 254 AVGLAQACVDESVKYAKQREAFGA-----PIGRNQA--IAFKIAEMEARTYVARAAYYDA 306

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +  + A     EA +  GG G++ E  +ARH+R+  A  + 
Sbjct: 307 ASRMLAGLPVKKEAAMAKLFSSEAAVTNAREATQIHGGYGFMNEYPVARHWRD--AKILE 364

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 365 IGEGTSEVQKMLIARELG 382


>gi|17538396|ref|NP_500720.1| IsoValeryl-CoA Dehydrogenase family member (ivd-1) [Caenorhabditis
           elegans]
 gi|2702376|gb|AAB92016.1| Hypothetical protein C02B10.1 [Caenorhabditis elegans]
 gi|4455127|gb|AAD21088.1| isovaleryl-CoA dehydrogenase precursor [Caenorhabditis elegans]
          Length = 419

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E + G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGD-KYVLNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 217

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLV    E  +P G       +K+G R + T EL F N     + +  +  G  + + 
Sbjct: 218 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGKGKGVY 269

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +SG     M+ +   A  YA +R   G  +    +++  +AD+   + 
Sbjct: 270 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 329

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ +  + +A + D+    +++ A   +       +  +    V  +A++ +GG+GYI +
Sbjct: 330 ASRSYLYMVAKAADKGNVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 382

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               R  R++    I  G+     L +   L K
Sbjct: 383 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 415


>gi|311069015|ref|YP_003973938.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310869532|gb|ADP33007.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 377

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 33/288 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S EY              +G   LTE   G+D  +I +   K  +G 
Sbjct: 101 TEEQKRKYIPKLASGEY--------------LGAFALTEPYSGSDAGSIRTTAVK-KNGK 145

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +D ++  A  E   G   +   + +    G    + + K+G   +
Sbjct: 146 YVLNGSKMFITNGGAADTYVTFALTEPGKGTRGISAFIVEKDTPGFIIGKKERKMGLHGS 205

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHY 338
            T EL F N     +   N+     E  KI L  LD   + ++   + +AEA     + Y
Sbjct: 206 NTTELIFDNA---EIPAENLLGQEGEGFKIALANLDVGRIGIAAQGLGIAEAALDYSVQY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +++R   G  +     +   +AD+A    A+  L +  A+  +      +EA+ A+  A 
Sbjct: 263 SKQRVQFGRPIASNQAISFKLADMATRAEASKHLVYHAADLHNRGLKCGKEASMAKQFAT 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            T      M  A+  +A++  GG GY ++  + R +R++    I  G+
Sbjct: 323 DT-----AMKAAI--DAVQIYGGYGYTKDYPVERLFRDAKVTQIYEGT 363


>gi|254819187|ref|ZP_05224188.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 397

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 30/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ ++  DG Y + G K +L++  +   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRARRNDDGTYTIDGQKMWLTNGATATLVATLVRTDEGSDKPHRNL 188

Query: 254 GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED- 311
             FLV + +  G    GL      +K+G +   T E+ F    G+  G  +V  G     
Sbjct: 189 TAFLVEKPVGFGEVVPGLRIPGKIDKLGYKGIETTEMIFD---GYQAGADDVLGGATGQG 245

Query: 312 -MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +++  ++   ++VS      G+R +   A+ YA++R   G  + +   +   +A++A 
Sbjct: 246 FFQMMDGIEVGRVNVSARACGVGLR-AFELAVRYAQQRETFGKPIAEHQAIAFQLAEMAT 304

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D  +          + A + KY C +    V  ++    GG GY
Sbjct: 305 KVEAAHLMMVNAARLKDSGERND-------VAAGMAKYLCSEYCAEVTQQSFRIHGGYGY 357

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  R++P   +L+G G + +
Sbjct: 358 SKEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|239820442|ref|YP_002947627.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239805295|gb|ACS22361.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 388

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 20/279 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248
           M    +   + +TE   GTD+  I +Q ++   G + +SG K F+++ M    + +A   
Sbjct: 120 MASGELVAAIAMTEPGAGTDLQRIKTQARR-DGGHWRISGSKTFITNGMHAGLVCVAART 178

Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
               G  G  L+  ++E    +G     L +K+G ++  T EL F +       LLG   
Sbjct: 179 DAAAGGKGISLL--MVETEGTSGFRRGPLLDKMGQKTLDTTELFFDDVRVPADHLLGG-E 235

Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G  + M+ L    L  A+ +V+ M+ ++ + + Y R R V G  L+     +  +A+
Sbjct: 236 EGRGFAQLMQQLPRERLLIAVGAVATMQRAIGDTLGYVRDRQVFGEPLLKMQNTRFKLAE 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                  A A         D+  +R  +       A + K+W       ++ E ++  GG
Sbjct: 296 CETQAQVARAF-------VDDCIARLMQGELDVPTAAMAKWWTTDACCRIVDECLQLHGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G++ E  +AR Y +     I  G+   M   +   +EK
Sbjct: 349 YGFMNEYPVARLYADVRVGRIYGGANEVMKEIIARAMEK 387


>gi|31789453|gb|AAP58567.1| putative acyl-CoA dehydrogenase [uncultured Acidobacteria
           bacterium]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 26/257 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLV 258
           GLTE   G+D +   S   +  +G + ++G K F++  + +D  + +A  +  +    + 
Sbjct: 124 GLTEPGAGSDASGTRSTAVR-QNGGWLVNGSKNFITHAIHADTCVAVAVTDREKKSRGIS 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKI 314
             + E G+P G    + +NK+G R++ T  + F +    L+ D N       G +  M+I
Sbjct: 183 AFIFEKGTP-GFSPAKKENKLGLRASETASVIFEDC---LIPDENRLGEEGQGFINAMEI 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   +S++ + V +A+     A+ Y++ R   G  + +   ++  +A++A  I AA
Sbjct: 239 L---DGGRISIAALAVGIAQGAYESALSYSKERKQFGKAISEFQAIQFKLANMATQIDAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A   D  +  ++E++ A++ +        +++  V  EA++  GG GY ++  
Sbjct: 296 RLLMYRAAWMKDNGRKTTKESSMAKLFS-------SEISVNVCEEAIQIHGGYGYTKDYP 348

Query: 430 IARHYRESPANSILLGS 446
             + +R+S   +I  G+
Sbjct: 349 PEKFWRDSKLCTIGEGT 365


>gi|119716086|ref|YP_923051.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536747|gb|ABL81364.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 608

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 66/328 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-------YCLSGHKWFLSSPMSD-----AFIMLAQV 249
           L+E + G+ ++ IT++     DG        Y L+G+K ++S+   D       ++LA+ 
Sbjct: 164 LSESQAGSSLSDITTRAVPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKT 223

Query: 250 EGRVGC----------FLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN- 293
            G  G           F+VP+ L D +      N +    L +K+G R      L F + 
Sbjct: 224 PGPDGAIDPSTKGISLFVVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDG 283

Query: 294 ---------TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                      G+L+G+       +  M    +I I L +A +  +G   SL     YA+
Sbjct: 284 TWEPQGGKGAVGYLVGEPGQGLRQMFHMMNAARIEIGLGAAALGFAGYAASL----DYAK 339

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSR 386
            R     +             L++   +KR +           AL    A   DE A   
Sbjct: 340 SRRQGRPLTRSGKDATQPQVPLVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGT 399

Query: 387 SEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            E+ A A     I+ P+ K W  +      + A++ +GGSGY  +  + +++R++  N I
Sbjct: 400 PEQVAEAGRLLEILTPVVKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMI 459

Query: 443 LLGSGNAMVLDVLN---LLEKGTNLFEQ 467
             G+     LD+L     LE G  L  Q
Sbjct: 460 HEGTHGIQALDLLGRKIRLEGGAYLAAQ 487


>gi|53723050|ref|YP_112035.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76818683|ref|YP_336307.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167743960|ref|ZP_02416734.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167821140|ref|ZP_02452820.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167899589|ref|ZP_02486990.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167907904|ref|ZP_02495109.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167916265|ref|ZP_02503356.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|167924104|ref|ZP_02511195.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
 gi|254185800|ref|ZP_04892318.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254262945|ref|ZP_04953810.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254300854|ref|ZP_04968298.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52213464|emb|CAH39510.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76583156|gb|ABA52630.1| predicted acyl-CoA dehydrogenases [Burkholderia pseudomallei 1710b]
 gi|157811391|gb|EDO88561.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157933486|gb|EDO89156.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254213947|gb|EET03332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 383

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  D  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R R + G  ++D  ++   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR++   SI  G+   M+
Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370


>gi|331269784|ref|YP_004396276.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329126334|gb|AEB76279.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 379

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A  +Q   + DG  Y L+G K F++ SP+++ F++ A  +   G   
Sbjct: 123 FGLTEPNAGTD--ASGAQTVAVRDGDNYILNGQKCFITNSPLAETFVIFAITDRSKGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G+   ++++K+G R     E+   +       LLG      G    MK 
Sbjct: 181 ISAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIA--MKT 238

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   + V+   + LAE     A  Y + R   G  L     +   +AD+ + I  +
Sbjct: 239 ---LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQS 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A   ++ +  S  AA A++        C   A  V  EA++  GG GYI++  
Sbjct: 296 RHLLYLAAMDKNDGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 349 VERMMRDAKITQIYEGT 365


>gi|290985718|ref|XP_002675572.1| acyl-CoA dehydrogenase family member [Naegleria gruberi]
 gi|284089169|gb|EFC42828.1| acyl-CoA dehydrogenase family member [Naegleria gruberi]
          Length = 315

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 32/278 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VG 254
           LTE   G+D  ++ +  + +  G  + LSG K F+S    SD ++++A+V        + 
Sbjct: 47  LTEPNSGSDAGSLRTIARTLDGGKTFTLSGEKAFISGGGNSDVYLIMARVMDNDKDLGIT 106

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307
           CF+V +     +  GL + + + K+G  +  T       V++   N  G +     ++  
Sbjct: 107 CFIVEK-----NSEGLSFGKNEIKMGWNTQPTRAVIMDSVKVTSDNILGSVGEGFKIAMQ 161

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A  SV G +  L  A  Y   R   G  L +   ++  +AD+A  + 
Sbjct: 162 GLDGGRINI----ATCSVGGAQQCLNMAGEYLHTRKQFGKTLSNFQYLQFKLADMATRVH 217

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+     RL       +   E+++++     + K +       V+ ++++  GG GY+ E
Sbjct: 218 AS-----RLMVRSAATQLGIEKSSHSTAFCAMAKRFATDECFDVVNDSLQMFGGYGYLNE 272

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV----LNLLEKG 461
             + R+ R+   + IL G+   M L      LNL + G
Sbjct: 273 YGVERYLRDLRVHCILEGTNEVMRLITSRYYLNLYKDG 310


>gi|85710583|ref|ZP_01041647.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687761|gb|EAQ27766.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 380

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 42/270 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLSSPM-SDAFIMLAQV---EGRVG 254
           + +TE   G+D+  I +    I DG +  ++G K ++++   +D  I++A+    EG  G
Sbjct: 126 IAMTEPGTGSDLQGIKTTA--IEDGNHLVVNGSKTYITNGQNADVVIVVAKTNPAEGAKG 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300
             LV  L++ G+P G    R  +KIG  S  T EL F++               F  L+ 
Sbjct: 184 TSLV--LVDAGTP-GFEKGRNLDKIGQHSADTSELFFADVRVPKTNILGGEGRGFIHLME 240

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +L     P E + I      A+ + +G + +  EA+++ + R   G  + +    K  +A
Sbjct: 241 EL-----PQERLSI------AVSAQAGAQRAFDEAVNFTKDRKAFGTTVFEFQNTKFTLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +    A         D A +R          A   K W  +M   ++   ++  G
Sbjct: 290 DLKAKLQVGWA-------HLDWAIARHLRGELTTDEASAAKLWHTEMQWEMVDACLQLHG 342

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G+GY+ E +IAR +R++    I  G+   M
Sbjct: 343 GAGYMNEYAIARLWRDARVARIYGGTSEIM 372


>gi|254283365|ref|ZP_04958333.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium
           NOR51-B]
 gi|219679568|gb|EED35917.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium
           NOR51-B]
          Length = 386

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 34/313 (10%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + SM+    T  V ++W P +            +  T +A    LTE   G+D A++ + 
Sbjct: 93  ATSMIGKYCTEAVIEEWCPDL------------VMGTKLA-SYCLTEPGAGSDAASLRTS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
                D  Y ++G K F+S       +++    G  G   +  +L      G+ Y + + 
Sbjct: 140 AAADGDD-YVINGSKVFISGAGETDVLVVMLRTGDAGPKGISAVLIPADAEGISYGKNEE 198

Query: 278 KIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G ++  T  + F       +N  G       ++   ++  +I I    A  S+   + 
Sbjct: 199 KMGWKAQPTRMVTFEDVRIPKTNRLGEEGQGFAIAMEGLDGGRINI----ATCSIGTAQK 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389
           +L +A  Y + R      + D    +  +AD+A D+ AA  +    A   D   S++   
Sbjct: 255 ALEDATAYTQERKQFNSAIADFQATQFKLADMATDLVAARQMVRLAAWKLDNKDSQATTY 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A A+  A    +  C        +A++  GG GYI+E  + R+ R++  + IL G+   
Sbjct: 315 CAMAKRFATDAGFTICN-------DALQLFGGYGYIKEYPLERYVRDTRVHQILEGTNEI 367

Query: 450 M-VLDVLNLLEKG 461
           M V+    LL +G
Sbjct: 368 MRVIIARRLLMEG 380


>gi|159185757|ref|NP_357132.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140891|gb|AAK89917.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 390

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 131 LAMSETEAGSDVVSMRLKAERKGD-RYVLNGAKMWITNGHEADTLVVYAKTDMSAGARGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG LN   G    M  L
Sbjct: 190 TAFLIEKGFKGFRPAQKLDKLGMRGSPTSELVFEDCEVPEENILGRLN--DGVTVLMSGL 247

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   V  M+ ++   + Y R R   G  + +  +++  +ADI   + A+ A 
Sbjct: 248 DY-ERAVLAAGPVGIMQAAIDLVLPYVRERKQFGKAIGEFQLVQGKLADIYSAMNASRAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA A + A        + A  V  +A++ +GGSGY+ E    R
Sbjct: 307 VYAVARACDNGRITRQDAAGAILFA-------AERATQVALDAIQLLGGSGYVNESPAGR 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 LLRDAKLYEIGAGT 373


>gi|298242757|ref|ZP_06966564.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555811|gb|EFH89675.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 384

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 17/254 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D AA+ +   +  D  Y L+G K F+++  ++    + A  + + G   +
Sbjct: 123 FGLTEAGSGSDAAAMQTFAVRKGDK-YTLNGSKRFITNGGLAQVNTIFAITDPQAGTRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + +    G    R+++K+G + + T EL F N     +   N+  G  E  KI +  
Sbjct: 182 SAFIVEKDFPGFSVGRIEDKMGIKGSQTAELIFENC---EVPVENLLGGEGEGFKIAMRT 238

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +    + +A+     A+ YA++R      + +   ++  +AD+A  + AA  L
Sbjct: 239 LDRTRIGIGAQALGIAQGALDLAVAYAKQRVQFKKPIAENQGIQFMLADMATKVEAARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  +   D+   +  +       + + K +    A  V  +A++ +GG GY++E    R
Sbjct: 299 VYHASELVDDGDEQFSK------YSSMAKMFASDAAMDVTNDAIQVLGGYGYMKEYPAER 352

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 353 MLRDAKITQIYEGT 366


>gi|302415387|ref|XP_003005525.1| short-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
 gi|261354941|gb|EEY17369.1| short-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
          Length = 441

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 31/270 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  + +DG Y +SG K W  +S  +D FI+ A ++   G   +  
Sbjct: 188 LSEPVSGSDAFAMATKATETADG-YTISGGKMWITNSMEADFFIVFANLDHSKGYKGITA 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    G    + + K+G ++++T  +         L D+ +   P E++        
Sbjct: 247 FVVEKGTEGFSIAKKEKKLGIKASSTCVIN--------LDDVKI---PKENLLGEKGQGY 295

Query: 313 KILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           K  I  L+   + ++     LA        +   G ++ +   M+  IA    +IAAA +
Sbjct: 296 KYAISLLNEGRIGIAAQMTGLALGSWENAVKKQFGKLVGEFQGMQHQIAQSYTEIAAARS 355

Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L +  A        R +EA    +M A + K +  ++A  V   A+E +GG G++ +   
Sbjct: 356 LVYNAA--------RKKEAGEDFVMDAAMAKLYASQVAGRVSGLAIEWMGGMGFVRDGPA 407

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 408 EKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 437


>gi|228469380|ref|ZP_04054394.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis
           60-3]
 gi|228309064|gb|EEK17694.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis
           60-3]
          Length = 379

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E    +  P   +   IG  GLTE   GTD +A  +   +  +  Y L+G+K F++ 
Sbjct: 101 FGTEEQKQHYLPKLASGEWIGAFGLTEPNAGTDASAQQTFAVE-EEECYILNGNKIFITN 159

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           +  +  +I+ A  +   G   +   + +    G    + + K+G R +AT EL   N   
Sbjct: 160 AEYAHVYIIFAMTDKSKGNKGISAFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRI 219

Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                 G + G   V+   ++  +I I    A  ++   R ++ E + Y + R   G  +
Sbjct: 220 PKDRLLGKVGGGFKVAMHTLDGGRIGI----AAQALGIARGAMDETVKYTKERKQFGRSI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +AD+   I  A+ L  R A   D   S + EAA A++       +C + A 
Sbjct: 276 AKFQNTQFQLADLKARIDCASLLVRRAAWCKDNGLSYNLEAAEAKL-------FCAETAM 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 329 DMTTKAVQFHGGYGYTREYPVERMMRDAKITEIYEGT 365


>gi|167840722|ref|ZP_02467406.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 383

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
           +G++E   G+D+A+I +  ++  +  Y +SG K W  +   +D    LA        R  
Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGND-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +V  L       G+  ++   KIG  S+ T ++ F +       +L    G     ++
Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236

Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +   +   V    S+ E I Y R+R + G  ++D  V+   +A++  ++ A  
Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELKTEVEALR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL++R    + +    +  A+ A++ A        ++A  V    ++  GG G+  E SI
Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR++   SI  G+   M+
Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370


>gi|119476369|ref|ZP_01616720.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119450233|gb|EAW31468.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 591

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 43/284 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250
           + LTE   G+D+A I S      D  Y ++G K +++     M++  + L         E
Sbjct: 162 MNLTESDAGSDLAVIRSSALPEKD-YYRINGTKIYITWGDHQMTENVVHLVLARTPNAPE 220

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
           G  G   FLVP+ L   DGS    N +    +++K+G   + T  + F       G+L+G
Sbjct: 221 GVKGISLFLVPKFLVNSDGSIGDRNDVYAVSVEHKLGIHGSPTCVMSFGENEGAIGYLIG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----AIHYARRRHVSG--------GI 348
           + N          +   ++ A ++V G  V++++          +  V G        G 
Sbjct: 281 EENKGLA-----YMFTMMNHARLNVGGQGVAVSDRAYQQAAAYAKDRVQGQAPGDREKGS 335

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKY 402
           +I  P ++R +  +     A+ AL +  +++FD A      + R+       ++ PI K 
Sbjct: 336 IIRHPDVRRMLMVMRSLTEASRALCYVTSSAFDHAHHAVDKQERTLANFRGELLTPIAKG 395

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           W  ++A  V +  ++  GG G+IEE   A+  R++   +I  G+
Sbjct: 396 WSTEVAQEVSSLGLQVHGGMGFIEETGAAQFMRDARITTIYEGT 439


>gi|56420189|ref|YP_147507.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56380031|dbj|BAD75939.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 392

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
             +TE   G+D   I     K  D  + L+G K F++      F+M+  +          
Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNEADFVMVIAITDKERHQASN 184

Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           GR G  CF+V R           +   +P  L ++ ++       N   EL      G+ 
Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           LG              L ++  A   V    V  AE     AI YA+ R   G  + ++ 
Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD A++I AA  L    A + D+ +         R +A + K +   M   V+ 
Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             M+  GG GY +E  I R YRE+    I  G+     L +   L KG
Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384


>gi|148259868|ref|YP_001233995.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|326403204|ref|YP_004283285.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|146401549|gb|ABQ30076.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
 gi|325050065|dbj|BAJ80403.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 408

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P  +    +G  GLTE   G+D  ++ ++ +K+ DG Y L+G K W  +
Sbjct: 131 FGSEAQKDKYLPKLRAGEWVGCFGLTEPDAGSDPGSMRTRAKKV-DGGYILNGSKTWISN 189

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D  ++ A+  EG +  FLV R        GL   +++ K   R++ T  +  S+ F
Sbjct: 190 SPIADVCLVWAKDDEGVIRGFLVDR-----GSKGLETPKIEGKFSLRASVTGMIMLSDVF 244

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +L  +    GP         L++A   ++   +  AE   +A R++     +  +
Sbjct: 245 VPEDHMLPGVKGLRGPFS------CLNNARYGIAWGALGAAEFCWHAARQYTLDRKMFGR 298

Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           P     ++++ +AD+  +I      + RL    D  ++  E       M  + K   C  
Sbjct: 299 PLAATQLVQKKLADMQTEITLGLQGALRLGRLLDAGEAAPE-------MISLMKRNNCGK 351

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  +   A +  GG+G ++E  + RH
Sbjct: 352 SLDIARLARDMHGGNGIVDEYHVIRH 377


>gi|16124682|ref|NP_419246.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|221233375|ref|YP_002515811.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13421592|gb|AAK22414.1| acyl-CoA dehydrogenase, putative [Caulobacter crescentus CB15]
 gi|220962547|gb|ACL93903.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 29/255 (11%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--- 250
           +V     LTE   G+D AA+ ++  +  D  Y L+G K ++++   +  F ++A+     
Sbjct: 117 AVITSFALTEPEAGSDSAAVQTRATRDGDD-YILNGSKRYITNAGKASLFTVMARTNPDA 175

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                V  FLVPR L      GL   + + K+G +     ++ F N     +   N    
Sbjct: 176 KGGAGVSAFLVPRDLP-----GLTVGKPEKKMGQQGAHIHDVTFDNV---RVPAWNRLGA 227

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  K+ +  LD   + ++ + V +AE      + YA  R   G  +    +++  IAD
Sbjct: 228 EGEGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYASERKQFGQPIASFQLIQAMIAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +  AA AL    A   D   + + EAA        +K +  +M   V   A++  GG
Sbjct: 288 SKTEALAAKALVLETARKRDAGVNVTLEAAS-------SKLFASEMVGRVADRAVQVFGG 340

Query: 422 SGYIEERSIARHYRE 436
           +GY+ +  I R YR+
Sbjct: 341 AGYVADYGIERLYRD 355


>gi|297530150|ref|YP_003671425.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3]
 gi|297253402|gb|ADI26848.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3]
          Length = 392

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
             +TE   G+D   I     K  D  + L+G K F++      F+M+  +          
Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNEADFVMVIAITDKERHQASN 184

Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           GR G  CF+V R           +   +P  L ++ ++       N   EL      G+ 
Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           LG              L ++  A   V    V  AE     AI YA+ R   G  + ++ 
Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD A++I AA  L    A + D+ +         R +A + K +   M   V+ 
Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             M+  GG GY +E  I R YRE+    I  G+     L +   L KG
Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384


>gi|254501549|ref|ZP_05113700.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222437620|gb|EEE44299.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 386

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249
           L +TE   G+D+  +  Q  +   G + ++G K F+S +  +D FI+             
Sbjct: 122 LAMTEPDAGSDVRGMKCQAVR-DGGDWVINGSKHFISGAEHADFFIVFVATGVDETPKGP 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           + R+ CFLV R    G+P G   +   N + ++      L F         +LG+++   
Sbjct: 181 KKRITCFLVDR----GTP-GFEVRDGYNSVSHKGYKNYILYFDQCRLPNAQVLGEVD--- 232

Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  E M   +Y   L  A MSV   R     A++YA  R   G  +     +   +AD+ 
Sbjct: 233 GGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQSIAKFQGISFQVADMI 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L+   A   D++   + E A A++ A        +M   V    ++  GG G
Sbjct: 293 TEIDAADWLTLAGAWRLDQSLPANREIASAKVYA-------TEMLARVTDTTLQIFGGMG 345

Query: 424 YIEERSIARHYRESPANSILLGS 446
            +++  I R +R++    I  G+
Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368


>gi|68146493|emb|CAH10179.1| ChaO protein [Streptomyces chartreusis]
          Length = 388

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           + LTE  GG+D+ A+ +  ++  DG Y ++G K W  +S  S    +L + +        
Sbjct: 124 MALTETGGGSDLQAMRTVARREGDG-YVVNGAKTWITNSRRSRLIALLCKTDPDAEPAHS 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           G  ++  L+E G   GL   R   K+G +   + EL F N       LLG +    G  +
Sbjct: 183 GMSVL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFENHRARADALLGGVE-GHGFAQ 237

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+ L    L  A  ++   R +L +A+ YA+ R   G  +     +   +AD+A  + A
Sbjct: 238 MMRGLETGRLQVAARALGVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTA 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+   A        R+E      + A + K +  + A  +   A+   GG GY  E 
Sbjct: 298 ARQLTLYAAR-------RAEAGHRVDMEAGMAKLFASETAMQIALNAVRIHGGYGYSTEF 350

Query: 429 SIARHYRESPANSILLGSGN 448
            + R++R++P   +++G G 
Sbjct: 351 DVERYFRDAPL--MIVGEGT 368


>gi|302816175|ref|XP_002989767.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii]
 gi|300142544|gb|EFJ09244.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii]
          Length = 393

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 35/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++   G Y L+G+K W  + P+++  I+ A+ +   G   +
Sbjct: 154 LVMSEPNSGSDVVSMKCKAERRDKG-YVLNGNKMWCTNGPVANTLIVYAKTDNSAGAHGI 212

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F + F      L      V  M   + L
Sbjct: 213 TAFIIEKGMEGFTTAQKLDKLGMRGSDTCELVFQDCFVPPENILGQEGKGVYVMMSGLDL 272

Query: 319 DSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +++ SG    M+  +   + Y R+R   G  + +  +++  +AD+   + A+ AL  
Sbjct: 273 ERLVLA-SGPLGLMQACMDVVLPYVRQREQFGKPIGEFQLIQGKLADMYTKMQASRALVH 331

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A S D                          A  +  +A++C+GG+GY+ E    R  
Sbjct: 332 SVARSCD--------------------------AGHIDRKAIQCLGGNGYVNEYPTGRLL 365

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R++    I  G+G + +  VL
Sbjct: 366 RDAKLYEI--GAGTSEIRRVL 384


>gi|292656835|ref|YP_003536732.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370945|gb|ADE03172.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 381

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 60/274 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254
            GL+E   G++ A +++  ++  D  Y ++G K W  +       I+ A+ +      V 
Sbjct: 127 FGLSEPDAGSNPAEMSTVARREGDE-YVINGKKQWITNGQRGGVCILFAKTDPDDPSSVT 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312
            FLVP         G    + + K+G R+        S+T   L  D+ +   P E+   
Sbjct: 186 QFLVPE------SAGYEVGKKEEKLGLRA--------SDTTALLFDDVRI---PAENRLT 228

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMK---- 356
           +    L +A   ++G R+ +A            +AI YA  R        D+P+ K    
Sbjct: 229 EEGKGLSAAFRILTGGRIGIASQAVGLAQAALDDAIDYANERE-----QFDKPISKIQAV 283

Query: 357 -RAIADIALDIAAATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
              IAD+   + A+  L   + R+A++ D+           R  A I KY+  + A  V 
Sbjct: 284 RHKIADMGTQVHASRMLVREAARVADAGDDP----------RTAASIAKYFASEAAVDVT 333

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            EA++  GG GY  +  + R+YR+S   +I  G+
Sbjct: 334 NEAVQVHGGYGYTTDFDVERYYRDSKITTIYEGT 367


>gi|145590704|ref|YP_001152706.1| butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282472|gb|ABP50054.1| Butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514]
          Length = 410

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 21/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254
             +TE   G+D+A I ++ +K  D  + ++G K F+SS  ++D FI+LA+     + R+ 
Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKKGDK-WVINGRKAFISSSDVADYFIVLARTYPPPDKRLR 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK 313
              +   + +    G   ++  +K+G   N   EL   N     + D N V    +  + 
Sbjct: 191 YLGLTFFVVEKDTPGFKVEQCYHKMGLFGNHACELVLENV---EVPDENRVGEEGMGFLY 247

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   D   + V+   V +A+     A  Y  +R   G  +     ++ +I ++   I +
Sbjct: 248 AMETFDRTRIGVAAQAVGMAQAAFEMAFRYVHQRQAFGYPIAFFQAIQFSIVEMMAKIFS 307

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE +           +A + K++  ++A  VI+EA+   GG G I E 
Sbjct: 308 ARLLTYLAAKLADEDRREF------TFVASLAKFYATEVAEEVISEAINLHGGVGVIRET 361

Query: 429 SIARHYRESPANSILLGSGN 448
            + R  R      I  G+ N
Sbjct: 362 GVERFLRSVKITQIYEGANN 381


>gi|294139583|ref|YP_003555561.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12]
 gi|293326052|dbj|BAJ00783.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12]
          Length = 391

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ ++I DG Y L+G K W  +SP++D FI+  ++EG++  F++
Sbjct: 136 FGLTEPDVGSDPGGMRTRAERI-DGGYRLNGAKMWITNSPIADVFIVWGKLEGKIRGFIL 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            + ++     GL   +++ K   R++ T E+   N       LL ++    GP       
Sbjct: 195 EKGMK-----GLSAPKIEGKFSLRASITGEIVMDNVEVPESALLPNVEGLKGPFG----- 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   +A R++    I  ++P     ++++ +AD+       T
Sbjct: 245 -CLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLAANQLIQKKLADM------QT 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++  L       +   ++A     ++ I +  C K A  +   A +  GG+G  +E  +
Sbjct: 298 EITLGLFTCLQAGRLMDQDALPVEAISLIKRNSCGK-ALDIARMARDMHGGNGISDEFHV 356

Query: 431 ARH 433
            RH
Sbjct: 357 IRH 359


>gi|260553902|ref|ZP_05826169.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404934|gb|EEW98437.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 430

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGTTDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  ARI+       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|219113303|ref|XP_002186235.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum
           tricornutum CCAP 1055/1]
 gi|209583085|gb|ACI65705.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum
           tricornutum CCAP 1055/1]
          Length = 436

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 26/268 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VG 254
            GL+E   G+D  A  +      D         W  ++  S A I+ A  +       + 
Sbjct: 174 FGLSEPGNGSDAGAAATTATLDGDEWVVNGTKAWITNAHESGAAIVFATTDKSLKHKGIS 233

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+VP         G      ++K+G R+++T  L   N     +   N+   P    KI
Sbjct: 234 AFIVPM-----DAPGFSLGAKEDKLGIRASSTSNLIMDNV---RIPKDNLLGEPGMGFKI 285

Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + V+G  + +A A     + YA  RH  G  + +   ++  I+ + +   +
Sbjct: 286 AMQTLDGGRIGVAGQALGIASASIDCAVKYALERHAFGKPISELQSIQNKISAMTVARDS 345

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R A   D  +  + EAA A++ A      C         +A++ +GG+GY+ + 
Sbjct: 346 ARLLTWRAAQLKDNGERFTREAAMAKLAASEAATMCSH-------QAIQILGGAGYVRDF 398

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
              RHYR++    I  G+     L + N
Sbjct: 399 PAERHYRDARITEIYEGTSEIQHLVIAN 426


>gi|111019727|ref|YP_702699.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819257|gb|ABG94541.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 598

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 43/298 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A IT++     DG Y ++G K ++S    +       ++LA+  G     
Sbjct: 164 LSEPQAGSSLADITTRAVPQDDGSYRVTGTKMWISGGDHELTENIVHLVLAKTPGGGPGV 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN----------TF 295
             +  F+VP+ L       G  N +    L +K+GNR      L F +            
Sbjct: 224 KGISLFIVPKYLPGADGGLGERNDVTLVGLNHKMGNRGTTNTLLAFGDGTHTPAGDAGAV 283

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           GFL+G+ +     +  M     +    ++++   V   +++ YAR R     +       
Sbjct: 284 GFLVGEEHRGLSYMFHMMNEARIGVGFVAIALGYVGYRKSLDYARVRTQGRPLGAKDPAA 343

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSF---RLANSFD---EAKSRSEEAAYARIMAP 398
               +ID   ++R +      +  A  L     RL +  D   +A +  +      ++ P
Sbjct: 344 PPVPIIDHADVRRMLLAQKSYVEGALVLGLYCSRLVDEQDTALDAATGDQATLLLDVLTP 403

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           I K W  +      + A++  GG GY  +  + ++YR++  N I  G+     LD+L 
Sbjct: 404 IAKSWPSQWCLEANSLAIQVHGGYGYTRDYDVEQYYRDNRLNPIHEGTHGIQGLDLLG 461


>gi|326799056|ref|YP_004316875.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326549820|gb|ADZ78205.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 382

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y L+G K W  +   +  ++++AQ    +G   +  
Sbjct: 125 LSEPEAGSDATSQKTIAEDKGD-YYLLNGTKNWITNGSNAAVYLVIAQTHPNLGHRGINA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + +    G      +NK+G R + T  L+FS+             FGF      +  G 
Sbjct: 184 FIVEKDSPGFTIGPKENKLGIRGSDTHSLQFSDVKIPKENRIGADGFGFTFAMKTLEGGR 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                  I + +  + ++     LA  + YA+ R   G  + +   ++  +AD+   I A
Sbjct: 244 -------IGIAAQALGIASGAYELA--LKYAKERTTFGKPIAEHQAIQFKLADMYTQIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A   D+ +  +E AA A++ A  T       A  +  EA++  GG G+++E 
Sbjct: 295 ARLLCLKAAWLKDQHQPYAEAAAVAKLFASDT-------AMRITVEAVQIHGGYGFVKEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|323450396|gb|EGB06277.1| hypothetical protein AURANDRAFT_60198 [Aureococcus anophagefferens]
          Length = 428

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 27/272 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E   G+D  A ++  +   D  + L+G K W  ++  +DA ++ A  +  +    +
Sbjct: 147 FGLSEPGNGSDAGAASTTARDDGDA-WVLNGTKAWITNAHEADAAVVFATTDKSLKHRGI 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L D    G      ++K+G R ++T  L   +       LLG+        +  KI 
Sbjct: 206 SAFLVDTKAEGFSVGAAEDKLGIRGSSTANLIMEDCRIPKSCLLGERG------DGFKIA 259

Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + + +     A  YA  R   G  L +   ++  I+++A  + AA
Sbjct: 260 MRTLDGGRIGIAAQALGIGQAALDVAATYAADRTAFGKPLTNLYAIQLKISEMACKLEAA 319

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEER 428
             L++R A+  D   + +++AA A++        C   A    A +A++ +GG GY+ + 
Sbjct: 320 RLLTWRAASRKDAGLAYTKDAAMAKL--------CASEAATFAAHQAIQVLGGMGYVSDM 371

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
              R YR++    I  G+     V+  LN+L+
Sbjct: 372 PAERFYRDARITEIYEGTSEVQHVVIALNVLK 403


>gi|221134834|ref|ZP_03561137.1| Acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999]
          Length = 598

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 121/296 (40%), Gaps = 34/296 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+  +  + +   DG Y +SG K F+S+   D       I+LA++       
Sbjct: 164 LTEPHCGSDLGMLKCKAEPNEDGSYRISGTKIFISAGEHDMSENIVHIVLARLPDAPAGT 223

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   D     G  N +    +++K+G + +AT  + F    G L+G  N  
Sbjct: 224 KGISLFIVPKYHVDEQGNKGERNTVKCGSIEHKMGIKGSATCVMNFDEARGILIGAPNRG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----------RRHVSGGI--LIDQP 353
              +     +  + + +  +S    S   A+ YA+          +++  G    +I  P
Sbjct: 284 LNCMFTFMNIARIGTGLEGLSASEASFQGALAYAQDRLQFRSMTGKKNADGPADPIIVHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +           AL+       DE      A ++    A   ++ PI K +  + 
Sbjct: 344 DVRRMLLTQKAFAEGNRALAIYCMQLVDETLYGTDADAKQLADAKLSMLTPIVKAFLTET 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           A    +  M+  GG GYI E  + +  R++   ++  G+     +D+L     G+N
Sbjct: 404 ALETTSHGMQVYGGHGYIAEWGMEQLARDTRICTMYEGTTGIQAIDLLARKIMGSN 459


>gi|84501855|ref|ZP_01000013.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389850|gb|EAQ02484.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 373

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 24/269 (8%)

Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           LGLTE   G+D + ++ +  ++  D  Y ++G K ++++ P++D  ++ A+ +   G   
Sbjct: 108 LGLTEPGAGSDALGSMATTARRDGDD-YVINGSKIYITNGPIADVILLYAKTDKSKGAKG 166

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   ++E  +P     Q+L +K+G R + T EL F +       ++G  N     V    
Sbjct: 167 ISAFIIETDNPGFKVAQKL-DKMGFRGSPTGELVFEDCRVPASAMVGQENTGVSVV---- 221

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD     V+ + V +AE      + YA+ R   G  +    +M+  +A+I  ++  
Sbjct: 222 -MSGLDLERAMVASVCVGMAERALELGLEYAKIREQFGRPISSFQMMQSKLAEIYTEVET 280

Query: 369 ATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A A S+R LA      K         ++ A    Y       AV  EA    GGSGY+++
Sbjct: 281 ARAFSYRALAACTGLPKGAGGRGEIHKLTAAACLYAGEAFNKAV-TEACHIHGGSGYMQD 339

Query: 428 RSIARHYRESPANSIL-LGSGNAMVLDVL 455
             I R YR   AN +L +G+G + V  ++
Sbjct: 340 TEINRLYR---ANKLLEIGAGTSEVRKII 365


>gi|134106811|ref|XP_777947.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260647|gb|EAL23300.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 416

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF- 256
           L ++E   G+D+ ++ +   +  +G  + ++G K W  ++P+S  F++ A+ +  V    
Sbjct: 152 LAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 211

Query: 257 -LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +   L+E G   G       +K G R + T EL F N     + + NV  G V +  ++
Sbjct: 212 GMTAFLVEKGW-KGFEVGEGLDKFGMRGSPTAELFFDNV---KIPEENV-LGKVGNGALV 266

Query: 316 IY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   LD   + +SG     M+ +L  A+ Y   R   G  +    +M+  +AD+   ++A
Sbjct: 267 LMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLMQGKLADMYTKLSA 326

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A  + +A + D       + A A +       +    A  V  EA +C+GG+GYI + 
Sbjct: 327 SRAYVYAVARACDAGMISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYINDY 379

Query: 429 SIARHYRESPANSILLGS 446
              R  R+S   ++  G+
Sbjct: 380 PAGRLVRDSRLYTVGAGT 397


>gi|319951364|ref|ZP_08025189.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319434961|gb|EFV90256.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 379

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 32/258 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257
           L+E + G+D AA+  + ++  D  Y ++G K W     ++D +    +  EG  G  C L
Sbjct: 127 LSEPQAGSDAAALRCRAERDGDA-YVVTGTKSWITHGGIADVYNTFVRTGEGSRGISCLL 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           VPR  E+     L + + ++K+G     T    +  T    G L+G         E ++I
Sbjct: 186 VPRDTEN-----LHFGKPEDKMGLNGVPTTTASYEGTRIDAGRLIGAEG------EGLRI 234

Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               LDS  + ++ +   +A+     A+ YA  R   G  +I    +   +AD+A  +A+
Sbjct: 235 AFSALDSGRLGIAAVATGIAQRALDDAVAYANEREAFGKTIIGHQGLGFLLADMAAAVAS 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A     A   D  +  S EA+ A++ A          A  V  +A++ +GG GY  E 
Sbjct: 295 ARAAYLDAARRKDAGRPYSREASIAKLTA-------TDAAMKVTTDAVQVLGGVGYTREF 347

Query: 429 SIARHYRESPANSILLGS 446
            + R+ RE+    I  G+
Sbjct: 348 PVERYMREAKITQIFEGT 365


>gi|299689355|pdb|3NF4|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Flavin Adenine
           Dinucleotide
 gi|299689356|pdb|3NF4|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Flavin Adenine
           Dinucleotide
          Length = 387

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 25/279 (8%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           +F  E       P   +   IG   L+E + G+D AA+       +DG Y ++G K W  
Sbjct: 110 VFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATP-TDGGYVINGSKSWIT 168

Query: 236 SSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
               +D + + A+  EG  G  CFLVP         GL + + + K+G  +  T    + 
Sbjct: 169 HGGKADFYTLFARTGEGSRGVSCFLVP-----ADQPGLSFGKPEEKMGLHAVPTTSAFYD 223

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347
           N    +  D  +             LDS  + ++ +   LA     EA+ YA  R   G 
Sbjct: 224 NAR--IDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +ID   +   +AD+A  +A A A     A   D+ +  S++A+ A++ A          
Sbjct: 282 KIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTA-------TDA 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A  V  +A++  GG GY  +  + R+ RE+    I  G+
Sbjct: 335 AMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEGT 373


>gi|207727717|ref|YP_002256111.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590958|emb|CAQ56570.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 393

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              +G L ++E   G+D+ ++  + ++  D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------VGALAMSEPNAGSDVVSMKLRAERRGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++  + E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338
            T EL F N       +LG+ N  T  +  M  L Y + A++S   +  M+  +     Y
Sbjct: 214 HTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  IAD+   + A  A  + +  + D A  R       +  A 
Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  Y   + A  +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|116328517|ref|YP_798237.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116121261|gb|ABJ79304.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 585

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 90/358 (25%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K   +EY P     M    V   + LTE   G+D+  + ++  K  +G++ L+G K 
Sbjct: 163 FGSKEMVKEYVP----KMANGEVFGAMALTEPNYGSDLPNLQTKAVKDENGVWRLTGTKR 218

Query: 234 FLSSPMSDAFIMLAQVEGRVGC------FLVPRLLEDGSPN----GLCYQRLKN------ 277
           F++                 GC       ++  L   G+P     GL +  +K+      
Sbjct: 219 FITH----------------GCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSSDVFIA 262

Query: 278 ----KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
               K+G   + T E+ + N+ G L+G         E+   LI    A+M+  G R+S+A
Sbjct: 263 GIEKKMGLHCSPTCEVVYENSPGILIG---------EEGYGLIRYSMAMMN--GARLSIA 311

Query: 334 ------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                       EA  YA  R   G  + + P ++R ++ +  +IA   A+    + S D
Sbjct: 312 AQAMGIATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSID 371

Query: 382 EAKSRSEE--------------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               +SE                        A +  P++KY+  + A  +  + ++  GG
Sbjct: 372 LYHWKSERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGG 431

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472
           +G+  +  I+R YR+    +I  G+    ++  +  +  G +        FE+ FS +
Sbjct: 432 AGFTYDYDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKI 489


>gi|88856935|ref|ZP_01131586.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1]
 gi|88813811|gb|EAR23682.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1]
          Length = 381

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T  +H+  +P+   R   P            I + +TE   G+D+  + S+ ++  +  +
Sbjct: 97  TAYLHRFGSPEQIDRWLRPALAGEF-----VIAMAVTEPDAGSDVRRMRSKARREGNE-W 150

Query: 227 CLSGHKWFLSS-PMSDAF---IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++G K F+++ P++D     + LA    R G F+V R    G P   C +R   K+G  
Sbjct: 151 VITGRKTFITNGPLADGIAIVVRLADTTDRFGVFVVLR----GDPGYQC-ERTLGKMGCN 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGP-----------VEDMKILIYLDSAIMSVSGM--- 328
           S+   EL F +          V  GP           +ED+  ++     +++ S +   
Sbjct: 206 SSEVGELVFDD----------VRVGPDRMLSPEGGSSLEDVLDVLVRGRVLVAASALGLA 255

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRS 387
           R +    + YA++R   G     +P+ +    +I++  A A+TA+      ++D A    
Sbjct: 256 RRAFDVGMEYAKQREAFG-----RPIGR--FQEISMKFADASTAIRAAHLITYDTAALLE 308

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++    +     K +  + A  V+ + M   GG+G+++   I R YR++   +I+ G+
Sbjct: 309 RDSTVPVLECSQAKLFASETAVMVVDQMMRVFGGAGFMQSSVIERLYRDARFFTIVEGT 367


>gi|306820834|ref|ZP_07454458.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551152|gb|EFM39119.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 379

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F+++   SD +I++A  +   G   +
Sbjct: 123 FGLTEPNAGTDASMQQTTAVKNGDH-YILNGSKIFITNGDESDTYIVMAMTDKSQGNRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G      + K+G R +AT EL F +    ++   N+ +   +  K+ +  
Sbjct: 182 SAFIVERGFKGFSTGPHEKKMGIRGSATCELIFEDC---IVPAENLLSQEGKGFKVAMQT 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A     E I Y + R   G  L      +  +AD+A  I AA  L
Sbjct: 239 LDGGRIGIAAQALGIAQGALDETIAYVQERKQFGRSLSKFQNTQFQLADLANMIEAARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A   D     S  AA+A++ A  T       A  V  + ++  GG GY  +  + R
Sbjct: 299 VYKAAFCKDNGLPYSVPAAHAKLFAAET-------AMKVTTKCVQLFGGYGYTRDYPVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKITEIYEGT 365


>gi|300122626|emb|CBK23194.2| Isovaleryl-CoA dehydrogenase [Blastocystis hominis]
          Length = 438

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 112/238 (47%), Gaps = 37/238 (15%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRV 253
           G+ +TE  GGTD+ ++ +   K  D  Y L+G K ++++      + DAF++ A+ +G++
Sbjct: 174 GVCMTEPDGGTDVMSMRTNAVKKGD-TYILNGRKMWITNGAINGELGDAFLVYAKTDGKL 232

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V + +   S      Q++KNK+G RS+ T EL F +       ++       E+ K
Sbjct: 233 SMFVVEKGMRGFSLG----QQIKNKLGMRSSGTAELVFEDV------EVPACNRIGEEGK 282

Query: 314 ILIYLDSAIMSVSGMRVSL-AEAIHYARR----RHVSGG--ILIDQPV-----MKRAIAD 361
             + +   + ++   RV+L A+++  A+R     +  GG  +   QP+     ++R IA+
Sbjct: 283 AALCM---MRNLEMERVTLAAQSVGIAKRCIEVMNAYGGERVAFGQPINRFGQIQRLIAE 339

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                 A  +  + +AN  D  K  +      R+     K +C  M   V   A++ +
Sbjct: 340 SYAGYQAGRSFLYNVANGLDLFKPGN------RMDTDAVKLFCGPMGKQVADNAIQVL 391


>gi|299533029|ref|ZP_07046416.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44]
 gi|298719253|gb|EFI60223.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44]
          Length = 408

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 21/255 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-QVEGRVG----- 254
           LTE   G+D++ + +       G + L+G K F++ + ++D F+++A Q +G  G     
Sbjct: 132 LTEPGAGSDVSRLGAHYAPAPQGGWTLNGQKKFITRANVADMFVVVARQADGPGGGRGLS 191

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            F+VPR        G+    +  K+G        + F +       LLG         +D
Sbjct: 192 AFVVPR-----DTPGITVSPVIPKLGWYGVPIALVSFDDVHIAPEHLLGKEGEGMALAQD 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +   +  A +++     +L  A  YA +R V G  +     ++  +A++A  I AA  
Sbjct: 247 TLLRARIGHAAIALGRAAGALQIAAQYANQRQVFGQPVGAHQGIQWMVAEMAAQIEAARC 306

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A  +D         A   I A I K     +   ++ + ++ +GG+GY++   + 
Sbjct: 307 LVYSTAQRYDAGD------ADVAIHASIAKLHATDLCMRIVVDCLQLLGGNGYLKAFPLE 360

Query: 432 RHYRESPANSILLGS 446
           R  R++  N I  G+
Sbjct: 361 RFLRDAKMNQIGEGT 375


>gi|104782429|ref|YP_608927.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95111416|emb|CAK16136.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 387

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V    ++ 
Sbjct: 187 TAFIVERDWKGFTRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRVLMSGLDY 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++++    A      M+  +   + Y   R   G  + +  +++  IAD+   + A+ A
Sbjct: 247 ERVVL----AGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRA 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D A++  ++AA   +       +  + A  +  EA++ +GG+GYI E    
Sbjct: 303 YLYAVAQACDRAETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYINEFPAG 355

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 356 RLLRDAKLYEIGAGT 370


>gi|330501899|ref|YP_004378768.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328916185|gb|AEB57016.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 379

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGWLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L + +  G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVEANTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------GIGALASAEAALKWTLDYTRERKAFGKAVADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQVGRVFIDRCLELHLQGKLDVPTAA-------MLKYWTTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  IAR + ++    I  G+   M
Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370


>gi|330797908|ref|XP_003286999.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum]
 gi|325083022|gb|EGC36486.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum]
          Length = 416

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 26/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257
            GLTE   G+D A + ++ +K + G Y L+G K W  +SP++D F++ A+ +   +  F+
Sbjct: 160 FGLTEPNAGSDPAGMQTRAKKNTAGNYVLNGTKTWITNSPIADVFVIWAKDDNNDIRGFV 219

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
           + + ++     GL   +++ K+  R++ T       VE+  S+ F     D+    GP  
Sbjct: 220 LEKGMK-----GLSAPKIEGKLSLRASITGMIVMEDVEVPASHMF----PDIKGLRGPFS 270

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +    Y      S+         A  Y   R   G  L    + ++ +AD+A +I+   
Sbjct: 271 CLNKARY-GIGWGSLGAAEFCYTTARQYGLDRKQFGRPLAANQLYQKKLADMATEISLGL 329

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              +++    D  K+  E  +       + K   C  +  +  ++ + +GG+G  +E  +
Sbjct: 330 QACYQVGRLIDAGKATPERIS-------LIKRNSCGKSLDIARQSRDMLGGNGIADEYHV 382

Query: 431 ARH 433
            RH
Sbjct: 383 IRH 385


>gi|317404354|gb|EFV84778.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 392

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 130/314 (41%), Gaps = 29/314 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 74  HMVAMEEISRASASIGLSYGAHSNLCVNQINRNGTPAQKAKYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +       +   L +
Sbjct: 134 GAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGPDADTLVVYAKTDPEAHQRGITAFLVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G    +  +K+G R + T EL F        N  G + G + V         ++  
Sbjct: 193 KGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNGGVKV---------LMSG 243

Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG  V + +A+      Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTLQASRAF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++  + D  +  +E     R        +  + A  +  E ++ +GG+GYI E  + R
Sbjct: 304 CYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYPVGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 LWRDAKLYEIGAGT 375


>gi|195588795|ref|XP_002084143.1| GD12977 [Drosophila simulans]
 gi|194196152|gb|EDX09728.1| GD12977 [Drosophila simulans]
          Length = 420

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 53/299 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            L+G K W  +   +D  I+ A+  G        +  F+V    E     G    +  +K
Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327
           +G R ++T EL F         DL V    +   E+  + + +          A   V  
Sbjct: 240 MGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R     ++ +  +++  +AD+  +++A  +  + +A S D A +RS
Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTNLSACRSYLYTVARSCD-AGNRS 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +     I+      +  + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403


>gi|116331245|ref|YP_800963.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116124934|gb|ABJ76205.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 585

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 90/358 (25%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K   +EY P     M    V   + LTE   G+D+  + ++  K  +G++ L+G K 
Sbjct: 163 FGSKEMVKEYVP----KMANGEVFGAMALTEPNYGSDLPNLQTKAVKDENGVWRLTGTKR 218

Query: 234 FLSSPMSDAFIMLAQVEGRVGC------FLVPRLLEDGSPN----GLCYQRLKN------ 277
           F++                 GC       ++  L   G+P     GL +  +K+      
Sbjct: 219 FITH----------------GCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSSDVFIA 262

Query: 278 ----KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
               K+G   + T E+ + N+ G L+G         E+   LI    A+M+  G R+S+A
Sbjct: 263 GIEKKMGLHCSPTCEVVYENSPGILIG---------EEGYGLIRYSMAMMN--GARLSIA 311

Query: 334 ------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                       EA  YA  R   G  + + P ++R ++ +  +IA   A+    + S D
Sbjct: 312 AQAMGIATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSID 371

Query: 382 EAKSRSEE--------------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               +SE                        A +  P++KY+  + A  +  + ++  GG
Sbjct: 372 LYHWKSERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGG 431

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472
           +G+  +  I+R YR+    +I  G+    ++  +  +  G +        FE+ FS +
Sbjct: 432 AGFTYDYDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKI 489


>gi|109899026|ref|YP_662281.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109701307|gb|ABG41227.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 391

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 30/256 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGR 252
           G+ LTE   GTD+ AI +   K  D  Y ++G K W  +S   ++  +L +     V   
Sbjct: 122 GVALTEPNAGTDLQAIRTTAVKDGDD-YIINGAKTWITNSLNGNSLAVLVKTDLDAVPAH 180

Query: 253 VGC--FLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS- 305
            G   F+V    E+G    G+   ++K K+G RS  T E+ F N       L+G+   S 
Sbjct: 181 TGTSMFIVETKDENGEFKAGITVSKMK-KLGYRSIDTCEVVFENVRVPAANLVGEKEGSG 239

Query: 306 ----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G +E  +I +    A ++    R +   A+ YA+ R   G  +     ++  + +
Sbjct: 240 FKHAIGGLELGRINVAARGAGIA----RGATELAVRYAQERETFGKAICQHQAIQLKLGE 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L  + A  +D  +    EA  A+        +C         EAM   GG
Sbjct: 296 MATQVEAARLLIEQAAAKYDANERCDMEAGMAKYFGSEAGVFCAN-------EAMRIFGG 348

Query: 422 SGYIEERSIARHYRES 437
             Y  E  I R+YR++
Sbjct: 349 YSYSVEYDIERYYRDA 364


>gi|254389567|ref|ZP_05004793.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294816838|ref|ZP_06775480.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326445820|ref|ZP_08220554.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197703280|gb|EDY49092.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294321653|gb|EFG03788.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 395

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 26/267 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           M    V  G  +TE   G+D  A+ +   + + G Y L+G K F+S +P++D  ++ A  
Sbjct: 116 MCAGDVIAGHAMTEPGSGSDAFAMATTVTR-TGGTYVLNGSKVFVSNAPIADVLLVFAVD 174

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG----DL 302
             + G   V   L D    GL   R  +K+G R++   E+           LLG     +
Sbjct: 175 PAKRGFAGVSAFLVDRDTPGLTVSRPVSKMGLRTSPMGEVHLDGCEVAADALLGPEGAGM 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            V    +E  +  I L SA+ +   MR  L   + +AR R   G  +     +   I D+
Sbjct: 235 AVFNWTMERERSFI-LASALGT---MRRDLERCVDHARTRGQFGRPIGSFQAVSHRIVDM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI--- 419
            + + AA  L  RLA   D  +    EAA A++           ++ A +   ++ +   
Sbjct: 291 RMRLDAARLLLHRLAWQIDNDRPTKVEAALAKVF----------VSEAFVQSGLDAVQIH 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY  E  + R  R++ A+ I  G+
Sbjct: 341 GGYGYTTEYELERDLRDALASRIYSGT 367


>gi|195443644|ref|XP_002069509.1| GK11564 [Drosophila willistoni]
 gi|194165594|gb|EDW80495.1| GK11564 [Drosophila willistoni]
          Length = 384

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 30/259 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L+E   G+D  A ++   K++D    Y L+G K W  +S  +   ++ A ++  +    +
Sbjct: 124 LSEPGNGSDAGAASTTA-KLNDETQTYLLNGTKAWISNSKEASGGLVFATIDKTLRHKGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313
              L      GL   + +NK+G R+++T +L        +L D+ V    +  M      
Sbjct: 183 TAFLTHKDVYGLSVSKKENKMGMRASSTCQL--------VLEDVQVPQNQILSMPGNGFR 234

Query: 314 -ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+AL + 
Sbjct: 235 IAMESLDCGRIGIAAQATGIAQAALELAVDYSQKRLAFGKQLSKMQMIQQKLADMALRVE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L++R A   D     ++EA+ A++ A     +C         + ++ +GG GY+ +
Sbjct: 295 TSRLLTWRAAWLKDNGLPITKEASMAKLHASEAATYCAH-------QCIQVLGGMGYVTD 347

Query: 428 RSIARHYRESPANSILLGS 446
                +YR +    I  G+
Sbjct: 348 MPAELYYRNARVTEIYEGT 366


>gi|237836953|ref|XP_002367774.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|211965438|gb|EEB00634.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|221505076|gb|EEE30730.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
          Length = 409

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 31/288 (10%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------- 247
           A+G L ++E   G+D+  + SQ  +  DG Y L G K W  +  ++D  I+ A       
Sbjct: 128 AVGALAMSEPEAGSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEI 187

Query: 248 -QVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            +V  + G    +   ++E+G  +GL   +  +K+G R + T  L F +     +   N+
Sbjct: 188 QEVPAKAGSSRSVTAVIVENGM-DGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNI 243

Query: 305 STGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                +  KIL+  LDS  + ++      M   L   + Y   R   G  + +  +M+  
Sbjct: 244 LGTTGDGAKILMSGLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGK 303

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+        A  + +A S+ E  +   + A + +        C + A  V  + ++ 
Sbjct: 304 LADVYSAFITHRAFLYSVARSYSEGSAGRADCASSILC-------CAEKATQVALDTIQM 356

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +GG+GY  E    R  R+S    I  G+G + +  +L   E  T   E
Sbjct: 357 LGGNGYTNEYPAGRLLRDSKLYEI--GAGTSEIRRMLIARELNTRFRE 402


>gi|297199867|ref|ZP_06917264.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710332|gb|EDY54366.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 386

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    ++W P++ S E             +    GLTE  GG+D  A  +  +  
Sbjct: 98  IHLFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144

Query: 222 SD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            D   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 145 PDTDEWVINGTKCFITNSGTDITGLVTVTAVTGRKPDGKPLISAIIVP----SGTP-GFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL FS+       LLG+           + L  LD   ++++ +
Sbjct: 200 VAAPYSKVGWNASDTRELSFSDVRVPAANLLGEQGRGYA-----QFLRILDEGRIAIAAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ R   G  +     ++  IAD  +++ A TA   RLA  + +A
Sbjct: 255 GTGLAQGCVDESVKYAKEREAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDA 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     EA +  GG G++ E  +AR +R+S    + 
Sbjct: 308 ASRLVLGEPFKKEAALAKLYSSTIAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILE 365

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 366 IGEGTSEVQRMLIARELG 383


>gi|218781176|ref|YP_002432494.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762560|gb|ACL05026.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 601

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252
           + LTE   G+ ++ + +  +   +G Y + G K F+S+   +       +MLA+++G   
Sbjct: 162 MALTEPGAGSSLSDLETSAEPTEEGYYLIRGQKIFISAGDHNCVDNVVHLMLAKIKGGPP 221

Query: 253 ----VGCFLVPRL---LEDG-SPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD 301
               +  F+VP+    L  G  PN +    + +K+G R     +L      N  G+L+G+
Sbjct: 222 GVKGISLFVVPKFRPALGGGLEPNDVVASGVYHKMGYRGAPIAQLSMGDGDNCRGWLVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LI 350
            +     +  M     L   + + +    +   A+ Y R R     I           +I
Sbjct: 282 PHKGLFYMFQMMNEARLGVGLGATAIASAAYYAALEYCRERRQGRKIGQKDPTQPQVPII 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA---RIMAPITKYWCC 405
           +   ++RA+      I  + +L  +     D     +  E+  Y+    ++ P+ K +  
Sbjct: 342 EHADIRRALLFQKAIIEGSHSLLLQGCKYADMMRVTTGEEQERYSLLLDLLTPVAKTYPS 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +M    +++ ++C GGSGY ++  + ++YR+   + I  G+     LD+L 
Sbjct: 402 EMGIQAVSQGLQCFGGSGYCDDYPLEQYYRDMRIHPIHEGTTAIHGLDILG 452


>gi|83311698|ref|YP_421962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946539|dbj|BAE51403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 383

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 50/261 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D A++ +  +K  D  Y ++G K F++ +P +  F ++A+ +      G 
Sbjct: 122 FALTEPNAGSDAASLRTTARKDGDH-YIVNGTKRFITNAPEASIFTLMARTDPNNKGAGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
           +  F+V    E  SP GL   ++  K+G +   T ++ F       +N  G + G     
Sbjct: 181 ISAFIV----EADSP-GLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGIEGQ---- 231

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            G    MK+L   D   + +S   V ++E     ++ YA  R   G  + +  +++  +A
Sbjct: 232 -GFKTAMKVL---DRGRLHISATCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM----APAVIAE-A 415
           D   +  AA  +    A   D+  + S EAA            CCKM    A   IA+ A
Sbjct: 288 DSRTEAYAARCMVLDAARKKDQGINVSTEAA------------CCKMFASEAVGRIADRA 335

Query: 416 MECIGGSGYIEERSIARHYRE 436
           ++  GG+GYI +  I R YR+
Sbjct: 336 VQVHGGAGYISDYGIERFYRD 356


>gi|328543478|ref|YP_004303587.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413222|gb|ADZ70285.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 387

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 39/283 (13%)

Query: 185 PTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           P  +A + +T       G  LTE   G+D+A I +Q +  + G + LSG K ++S+  ++
Sbjct: 105 PEQRAWLARTRTGRAISGFALTEPGSGSDVANIATQARPRTGGGWVLSGDKTYISNGGIA 164

Query: 241 DAFIMLAQVEGRVGC-----FLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           D +++ A+     G      FL+P           +E  +P+ L + R  + +   S+  
Sbjct: 165 DVYVVFARTGEAPGARGLSAFLLPADAPGLAVVERIEVIAPHPLAHLRFDDIV--LSDGA 222

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +       F   +  L+V    V              ++   R +L EA+     R + G
Sbjct: 223 LIGRHGEGFRIAMSVLDVFRATV-----------GAAALGFARRALDEALARVESRRLFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCC 405
             L D  +++  IAD+AL + A+  L +R A + D    R S EAA A++ A        
Sbjct: 272 APLSDLQMVQGHIADMALAVDASALLVYRAAWTKDMGAERVSREAAMAKLHA-------T 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + A  VI  A++  GG G  +  ++   YRE  A  I  G+ +
Sbjct: 325 EAAQTVIDTALQLHGGDGVRKGFAVESLYREIRALRIYEGASD 367


>gi|302673154|ref|XP_003026264.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8]
 gi|300099945|gb|EFI91361.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8]
          Length = 418

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 29/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  ++ ++ +K  D  Y ++G K W  +S  ++ F++ A  +   G     C
Sbjct: 162 LSEPAAGSDAFSLQTRAKKEGDH-YIINGSKMWITNSYEAEVFLIFANTDPSKGYKGITC 220

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F   + +      G+   + + K+G R+++T  L F +     +   N+  G  +  KI 
Sbjct: 221 FAATKDM------GIQIAKKEEKLGIRASSTCTLNFDD---LKVPAANIIGGEGQGYKIA 271

Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + ++   V LA+     A+ Y   R   G  +     M+  +A+ A++I AA
Sbjct: 272 IEILNEGRIGIAAQMVGLAQGAFDKAVPYTFERKQFGKPVGTFQGMQFQMAEAAVEIEAA 331

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   D+    +++AA A       KY    +A  V   A+E  GG G+  E  
Sbjct: 332 RLLTYNAARRKDQGLPFTKQAAMA-------KYHSSVVAQRVAGSAIEWAGGVGFTRETG 384

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I +++R+S   +I  G+ N  +  +   ++K
Sbjct: 385 IEKYWRDSKIGAIYEGTSNIQLQTIAKFIQK 415


>gi|229829340|ref|ZP_04455409.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM
           14600]
 gi|229792503|gb|EEP28617.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM
           14600]
          Length = 384

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 29/272 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ K        LTE   GTD     ++  ++ DG + L+G K F+++   +D +I++A 
Sbjct: 113 PLAKGEKLGAFALTEPGAGTDAQGAQTKAVEVEDG-WVLNGSKCFITNGKEADIYIIIAV 171

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            +      GR        ++E G+P G  +   + K+G R +AT EL F +       LL
Sbjct: 172 TDTVEDKRGRSKKLFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDCKIPKENLL 230

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
           G      G  E M  L   D   + ++   + L E      + +   R   G  +     
Sbjct: 231 G--RRGKGFQEAMHTL---DGGRIGIAAQALGLGEGAIDRTVAFVMERKQFGRPIGAFQN 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+   + AA  L +R A +  E    S EAA A++ A        + A  V  +
Sbjct: 286 TQFQLADMKTRMDAAKYLVYRAACAKAEKSRFSAEAAEAKLFA-------AEAAMDVTTK 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GY  E  + R  R++    I  G+
Sbjct: 339 AVQLHGGYGYTREYEVERMMRDAKITEIYEGT 370


>gi|149186178|ref|ZP_01864492.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           SD-21]
 gi|148830209|gb|EDL48646.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           SD-21]
          Length = 391

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + +  +K+ DG Y L+G K W  +SP +D F++ A+ E   G  + 
Sbjct: 134 FGLTEPDAGSDPAGMKTTAKKV-DGGYVLNGSKTWISNSPFADVFVVWAKSE-EHGGGIR 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT---VELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ KI  R++ T   V  E       LL ++    GP       
Sbjct: 192 GFVLEKGM-KGLSAPKIEGKISLRASTTGMIVMDEVEVDEDALLPEVQGLKGP------F 244

Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE  +H AR+    R   G  L  + + +  +AD+  +I+   
Sbjct: 245 GCLNRARYGISWGALGAAEFCMHAARQYGLDRQQFGVPLASKQLYQLKLADMMTEISLGL 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE +       ++  M  I K      A  +  +A +  GG+G  EE  +
Sbjct: 305 QGSLRVGRLMDEGR-------FSPDMISIVKRNNVGKALDIARKARDMHGGNGISEEYQV 357

Query: 431 ARH 433
            RH
Sbjct: 358 IRH 360


>gi|108743508|dbj|BAE95610.1| putative acyl-CoA dehydrogenase [Streptomyces kanamyceticus]
          Length = 401

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+G K  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAITSKGVKDGDD-YVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313
           L +  P       GL      +K+G +   T EL      G  +    V  G       +
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGATGRGFYQ 250

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A  + A
Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E 
Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|302561781|ref|ZP_07314123.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479399|gb|EFL42492.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 390

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG--CFL 257
           L+E   G+D A++ ++  +  D         W     ++D + ++A+   EG  G   FL
Sbjct: 133 LSEPSSGSDAASLRTRAVRDGDDWVITGTKAWITHGGIADFYTVMARTGEEGPRGISAFL 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           VP     G   GL     + K+G + + T ++      G  + D        +   I L 
Sbjct: 193 VP-----GDAEGLGAAVPEKKMGMKGSPTAQVHLD---GVRVPDARRIGEEGQGFAIALS 244

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + LA     EA+ YA  R   G  + D   ++  +AD+A  I A  A
Sbjct: 245 ALDGGRLGIAACAIGLAQAALDEALGYATERRQFGKPIADFQGLRFMLADMATQIEAGRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D  +  +++AA A       K  C   A  V  +A++ +GG GY  +    
Sbjct: 305 LYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDAVQVLGGYGYTADFPAE 357

Query: 432 RHYRESPANSILLGS 446
           R  RE+    I+ G+
Sbjct: 358 RLMREAKVLQIVEGT 372


>gi|210075529|ref|XP_501919.2| YALI0C16797p [Yarrowia lipolytica]
 gi|199425292|emb|CAG82239.2| YALI0C16797p [Yarrowia lipolytica]
          Length = 530

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 25/273 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGR 252
           S  I L +TE   G+D+A IT+  +K  DG  Y ++G  KW  +   +D F +  +  G 
Sbjct: 249 SKRICLCITEPDAGSDVANITTTAEKTPDGKFYIVNGIKKWITNGIWADYFTVAVRTGGP 308

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVS 305
             G   +  LL +    GL  +R+  +    S +T      V++   N  G       V 
Sbjct: 309 GSGMNGISVLLLERGMEGLETRRMNTQGMLSSGSTWVTMEDVKVPVENLLGKENKGFKVI 368

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                  ++ I + +   S    RV   EA  YA +R   G  LI+ PV++  +A++A+ 
Sbjct: 369 MTNFNHERVGIIIQANRAS----RVCYEEACKYAHKRKTFGKPLIEHPVIRAKLANMAIR 424

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGG 421
           I +  A    L N   + +   EE A  R+   I    C   A   +     EA +  GG
Sbjct: 425 IESTHAW---LENLVFQCQMFPEEEAMLRLGGAIAG--CKAQATQTLELCAREASQIFGG 479

Query: 422 SGYIE---ERSIARHYRESPANSILLGSGNAMV 451
             Y        + R YRE  A +I  GS   M+
Sbjct: 480 LSYTRGGLGGKVERLYREVRAYAIPGGSEEIML 512


>gi|300705368|ref|YP_003746971.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299073032|emb|CBJ44389.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
          Length = 393

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              +G L ++E   G+D+ ++  + ++  D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------VGALAMSEPNAGSDVVSMKLRAERRGDH- 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++  + E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338
            T EL F N       +LG+ N  T  +  M  L Y + A++S   +  M+  +     Y
Sbjct: 214 HTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  IAD+   + A  A  + +  + D A  R       +  A 
Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  Y   + A  +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|257463115|ref|ZP_05627516.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|317060711|ref|ZP_07925196.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313686387|gb|EFS23222.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 381

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 37/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD------IAAITSQGQKISDGIY 226
           W    F  E       P   +   IG  GLTE   GTD      IA      Q+     +
Sbjct: 96  WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTDASGQQTIAVFDEATQE-----W 150

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F+++   +  +++ A  +   G   +   ++E G+P G    + + K+G R +
Sbjct: 151 VINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEAGTP-GFSIGKKEKKLGIRGS 209

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335
           AT EL F +       LLGDL       +  KI ++ LD   + ++   + LA     EA
Sbjct: 210 ATCELIFEDVRLPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  L         +A++ + + AA  L ++ A         + +AA A++
Sbjct: 264 VQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWKESNHLPYTVDAARAKL 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 324 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|254429503|ref|ZP_05043210.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195672|gb|EDX90631.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 383

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 29/271 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++++  +K  D  Y L+G K F+S    +D  +++A+  G     + CF
Sbjct: 124 LTEPGAGSDAASLSTTAKKDGDD-YVLNGAKAFISGAGDTDMLVLMARTGGSGAGGISCF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309
            VP         G+ Y R + K+G +S  T  +   +       L+G+      ++   +
Sbjct: 183 AVP-----ADTPGISYGRNEMKMGWKSQPTRAVILEDARIPADCLIGEEGQGFRIAMAGL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +I I    A  S+   + +L +A  Y + R   G  + D   ++  +AD+A ++ AA
Sbjct: 238 DGGRINI----ASCSLGAAQAALHQAQQYVQERKQFGQAIGDFQTVQFTLADMATELVAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D+  S         ++  + K     +   V  +A++  GG GYI E  
Sbjct: 294 QQMVRLAAWKLDQNHSDKS------MLCAMAKRLATDLCFNVCNQALQLHGGYGYISEYP 347

Query: 430 IARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           + R+ R++  + IL G+   M V+   N+L+
Sbjct: 348 LERYVRDARVHQILEGTNEIMRVIIARNVLK 378


>gi|71990804|ref|NP_491886.2| Acyl CoA DeHydrogenase family member (acdh-4) [Caenorhabditis
           elegans]
 gi|31249876|gb|AAB52476.3| Acyl coa dehydrogenase protein 4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 319

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   TS      L+E   G+D  A+ +  +K  D  Y ++G K W  +S  S+ F++ A 
Sbjct: 82  PKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDD-YVINGSKMWISNSEQSETFLVFAN 140

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G     CF+V    E G+  G    + ++K+G RS++T  L F N       +LG
Sbjct: 141 ADPSKGYKGITCFIV----EKGT-KGFTIGKHEDKLGVRSSSTCPLHFDNVRVHKSAILG 195

Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
           +        +  K  I YL++  + +    + LA+      I Y ++R   G  +ID   
Sbjct: 196 EFG------KGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRIIDFQG 249

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           M+  IA +  +I AA  L +  A           EAA A++ A
Sbjct: 250 MQHQIAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFA 292


>gi|291239181|ref|XP_002739489.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight
           chain-like [Saccoglossus kowalevskii]
          Length = 428

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +        G 
Sbjct: 164 VTEPGAGSDVAGIRTRAEKKGDH-YVINGQKMWITNGGKANWYFVLARTDPDLKRPASGA 222

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVS 305
              F+V R     +P      R +  +G R + T  + F +        LLGD     ++
Sbjct: 223 FTGFIVDRDTPGVTPG-----RKELNMGQRCSDTRGITFEDVVVPKENVLLGDGAGFKIA 277

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G  +  +  +    A  +V   + +L EA  YA  R   G ++     +   +A++A+ 
Sbjct: 278 MGAFDKTRPPV----AAGAVGLAQRALDEATKYALERKTMGKVIAQHQAVAFILAEMAIG 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A   +++     D+    +         A I K W   +A     +A++  GG+GY 
Sbjct: 334 IETARLATYKCCWEHDQGHRNT-------YYASIAKAWAADVANKCATDAVQIFGGNGYN 386

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 387 SEYPVEKLMRDAKIFQIYEGT 407


>gi|262378977|ref|ZP_06072134.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|262300262|gb|EEY88174.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 390

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 40/293 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + + PK+ S EY              +G L ++E   G+D+ ++T +  +  D  
Sbjct: 108 TEAQKQRYLPKLVSGEY--------------VGALAMSEPNAGSDVVSMTLRADQKGD-R 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  +   +D  ++ A+ + + G   +   L +    G  + +  +K+G R  
Sbjct: 153 YVLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDMKGFSHGQHLDKLGMRG- 211

Query: 285 ATVELEFSNTFGFLLGDL-----NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA--- 335
                  SNT+     D      NV  G    +K+L+  LD     +SG  + + +A   
Sbjct: 212 -------SNTYPLFFDDCEVPAENVLGGVGNGVKVLMSGLDYERAVLSGGPLGIMDACLD 264

Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y   R   G  L +  +M+  IAD+     A  AL + +  + D    R++     
Sbjct: 265 IVMPYLHERKQFGQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD----RADHGRAL 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           R  A     +  + A  +  EA++ +GG+GYI + +  R +R++    I  G+
Sbjct: 321 RKDAASAILYSAEKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGAGT 373


>gi|258655394|ref|YP_003204550.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258558619|gb|ACV81561.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 621

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 147/361 (40%), Gaps = 62/361 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   G+D+ A  ++  +  DG + L G K F++S   D       ++LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLEGVKRFITSAEQDLTENIVHLVLARPEGPGIES 223

Query: 252 RVGC-----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----SNTFG 296
           R G      F+VP+ L D      G  NG+    +++K+G + + T EL F    S   G
Sbjct: 224 RPGTKGLSLFIVPKFLFDPATGELGERNGVFVTGVEHKMGLKVSTTCELSFGLNGSPAVG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------ 348
           +LLG+ +   G  +  +++ Y  +     +++ +      A+ YA+ R  S  +      
Sbjct: 284 YLLGERH--DGIAQMFQVIEYARMMVGTKAIATLSTGYLNALDYAKTRVQSADLTRAADK 341

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------I 395
                 +I  P ++R +           A+    A+  D                    +
Sbjct: 342 TAPRVTIIHHPDVRRILMRQKAYAEGLRAVYLYTASWQDRIAGGELGGGELAMAKHVNDL 401

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K    + A   +A +++  GGSGY ++  I ++ R++  +++  G+      D  
Sbjct: 402 LLPIVKGVGSERAYENLALSLQVFGGSGYTQDYPIEQYIRDAKIDTLYEGTTAIQAQDF- 460

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
                    F ++       LG    ++ T ++ S+   ++ +       E++AL  +A 
Sbjct: 461 --------FFRKIVKDGGAALGVIATEIATFVKTSMPETRDGR-----FKEELALLGTAL 507

Query: 516 A 516
           A
Sbjct: 508 A 508


>gi|29833084|ref|NP_827718.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610206|dbj|BAC74253.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 391

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 16/259 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D A++ +  ++ S G + L+G K W  +
Sbjct: 113 FGSEEQKQEWLPRMASGDVIGCFGLTEPDHGSDPASMRTYAKRESGGDWVLNGRKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++   ++ AQ +  +  F+VP         G     +K+K   R++ T EL   +   
Sbjct: 173 GSVAGVAVVWAQSDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDDVRL 227

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L   TG    +  L +    I+  ++   R S   A+ YA+ R   G  +    +
Sbjct: 228 PAAAVLPEVTGLKGPLSCLSHARYGIVWGAMGAARASFEAAVEYAKTREQFGRPIGGFQL 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +   
Sbjct: 288 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI--- 344

Query: 415 AMECIGGSGYIEERSIARH 433
               +G +G   E  + RH
Sbjct: 345 ----LGANGISLEYPVMRH 359


>gi|73539846|ref|YP_294366.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72117259|gb|AAZ59522.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 376

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  Y L+G K F++S   +D  I+LA 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-YVLNGVKQFITSGKNADVAIVLAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      +  G    RL++K+G  S+ T ++   +       +LG
Sbjct: 170 TDKAAGKRGISAFLVPT-----NTPGYIVARLEDKLGQHSSDTAQIVLEDCRVPAANMLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           D      ++   +E  +I I    A  S+   R +   A+ YA+ R   G  L     ++
Sbjct: 225 DEGAGYKMALSGLEGGRIGI----ASQSIGMARAAFDAALAYAKERESFGQPLFQHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLADMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLFA-------SEMAEKVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|325277409|ref|ZP_08143027.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
 gi|324097453|gb|EGB95681.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
          Length = 387

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G       +K+G R + T EL F N       +LG LN        +++L
Sbjct: 187 TAFIVERDWPGFSRSNKFDKLGMRGSNTCELFFDNVEVPEENMLGQLNGG------VRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   + A+
Sbjct: 241 MSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNAS 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E  
Sbjct: 301 RAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYINEFP 353

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 354 AGRLLRDAKLYEIGAGT 370


>gi|300693543|ref|YP_003749516.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299075580|emb|CBJ34873.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 377

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFI 244
           P   T  AIG   LTE + G++   + ++     DG + L+G K F+++     ++  F 
Sbjct: 112 PDLATGRAIGAFCLTEPQAGSEANNLRTRAVP-RDGHWVLNGSKQFVTNGARARLAIVFA 170

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +     G+ G   F+VP         G    R ++K+G R++ T  +   +     +   
Sbjct: 171 VTDPGAGKRGISAFIVPT-----DTPGFQVGRPEHKLGIRASDTCPITLDDC---AVPQA 222

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356
           N+   P E +KI L  L+   + ++   V +A A      HYA  R   G  L +   + 
Sbjct: 223 NLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARHYANERIQFGKALREHQTIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L    A      K    EA+ A       K +  ++A  + ++A+
Sbjct: 283 NMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYASELAEEICSKAI 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+ + ++ RHYR++    I  G+
Sbjct: 336 QIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|315442919|ref|YP_004075798.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315261222|gb|ADT97963.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 382

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T++  +  D  + ++G K +++S +   +++ A   G  G   + 
Sbjct: 124 LAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVVTAARTGGPGAAGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            ++ D    G    R  +K+G RS+ T EL ++        D+ V    V   +   +L 
Sbjct: 183 LIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYT--------DVRVPAANVVGAENTGFLQ 234

Query: 320 SAIMSVSGMRVSLAEAIH------------YARRRHVSGGILIDQPVMKRAIADIALDIA 367
            A   VS  RV LA   +            + R R   G  LI +  ++  +A++A  I 
Sbjct: 235 IAAAFVS-ERVGLAAQAYSSAQRCLDLTAEWCRNRQTFGKPLIARQTVQSTLAEMARRID 293

Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A       +  +LA   D       E  +A+  A     W       V  +A++  GG 
Sbjct: 294 VARVYTRHVVERQLAGDADLIT----EVCFAKNTAVEAGEW-------VANQAVQLFGGM 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY+ E  + R YR+     + +G G   +L  L
Sbjct: 343 GYMTESEVERQYRD--MRILGIGGGTTEILTSL 373


>gi|228015642|gb|ACP50614.1| glutaryl-CoA dehydrogenase [Desulfococcus multivorans]
          Length = 389

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K + PK+ S E+               G G+TE   G+D+ A++S  +   D  + L+
Sbjct: 109 LKKKYVPKLSSAEF-------------LGGFGITEPDAGSDVMAMSSTAEDKGDH-WLLN 154

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           G K W  ++  +D  I  A  +   G   L   ++E  +  G+    L+ K+G+ ++ T 
Sbjct: 155 GSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSHASPTG 213

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341
           EL   N     +   N+   P +  +I+   L+   +S +   V LA+A     I Y   
Sbjct: 214 ELFLDNV---KVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNE 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + D  + +  IA +A+++ AA  L+++ A + DE +  +       +   + K
Sbjct: 271 RRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNN------GLDVAMAK 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           Y   +        AM  +G  GY  E  +AR YR++P   ++ GS N
Sbjct: 325 YAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSAN 371


>gi|120611835|ref|YP_971513.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590299|gb|ABM33739.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 389

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    +   DG Y L G K W  +  ++D +++ A+     G   +
Sbjct: 125 FALSEPEAGSDVAAMGCTARAEGDG-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G         I     A +  +     G  +        P E  K+ +  
Sbjct: 184 SAFIVDADAPGFSVAGRIEVIAPHPLARLRFD-----GCRVPAAQRLGAPGEGFKVAMRT 238

Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    SV+       R ++ EA+  A  R + GG+L D  + +  +A +A  I +A  L
Sbjct: 239 LDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQAKLAQMATAIDSAALL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D     + EAA A++ A        + A  VI  A++  GG G +  + + R
Sbjct: 299 TYRAAWLRDRGAVVTREAAMAKMTA-------TENAQQVIDAAVQLFGGLGVVSGQPVER 351

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 352 LYREIRALRIYEGA 365


>gi|119387813|ref|YP_918847.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119378388|gb|ABL73151.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 378

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)

Query: 193 KTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE 250
           +T  AI    LTE   G+D+A+  +  ++   G + L+G K ++S+  ++D +++ A+  
Sbjct: 115 RTGRAISAFALTEPGAGSDVASTATLAERTPGG-WRLTGEKTYISNGGIADIYVIFARTG 173

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G   +   L      GL        I     A ++L+     G +L D  +   P E
Sbjct: 174 EAPGARGLSAFLMPADCAGLSVAERIEVIAPHPLARLKLD-----GVVLPDAALIGRPGE 228

Query: 311 DMKIL-----IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI      ++  +   +  GM R +L EA+    R    GG L D  +++  +AD+A+
Sbjct: 229 GFKIAMSVLDVFRPTVGAAALGMARRALDEALARVHRPRAGGGALADHQIVQGHLADMAV 288

Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            + AA  L +R A + D    R + EAA A       K +  + A  VI  A++  GG G
Sbjct: 289 RVDAAALLVYRAAWTKDMGAPRVTREAAMA-------KLYATEAAQEVIDAALQLHGGDG 341

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
                ++   YR+  A  I  G+ +
Sbjct: 342 VRHGTAVEALYRDIRALRIYEGASD 366


>gi|308048711|ref|YP_003912277.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307630901|gb|ADN75203.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 387

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLTARKQGD-KYILNGNKMWITNGPDAHTYVIYAKTDPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   N+  G    +K+L+  
Sbjct: 187 TAFIVERDFPGFSQAQKLDKLGMRGSNTCELVFEDC---EVPAENILGGEGNGVKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M  ++   + Y  +R   G  + +  +++  +AD+     AA + 
Sbjct: 244 LDYERVVLSGGPLGIMAAAMDAVMDYVGQREQFGQAIGNFQLVQGKMADMYTRANAARSY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 304 VYTVAAACDRGETTRKDAAGAIL-------YSAELATQISLDAIQLLGGNGYINEYPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|281203495|gb|EFA77695.1| putative acyl-CoA oxidase [Polysphondylium pallidum PN500]
          Length = 421

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 27/268 (10%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           ++Y     A M+K       GLTE   G+D A +  + ++ SDG + L+G K W  ++P 
Sbjct: 143 KQYYLPKMASMEKIGA---FGLTEPNAGSDAAGLFCEAKQNSDGTWTLNGEKRWIGNAPF 199

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  I+ A+        L+   + + +  G+  + + NKI  R      +   N    +L
Sbjct: 200 ADVVIIWAR---NTDTKLINGFVIEKNTPGMTVETINNKIALRMVQNGHIYLKNC---IL 253

Query: 300 GDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID 351
            D N         +GP + + +   + S I    G+  S  E+ I Y + R   G  L  
Sbjct: 254 SDENRLPLAKDFGSGPGKSLFLTRIVASWI--ALGIACSAYESCIKYVKERKQFGQSLAK 311

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +  +   I + + ++ R+++ FD+ K       Y ++   + K         V
Sbjct: 312 YQLVQERLVKMLGIIQSMSLMTLRISHLFDQNK-----LTYGQV--GLLKAHNTSHGRQV 364

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPA 439
           ++ A E +GG+G + +  +AR + +  A
Sbjct: 365 VSMARELLGGNGIVTDFGVARSFVDMEA 392


>gi|256421270|ref|YP_003121923.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256036178|gb|ACU59722.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 392

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 19/239 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G+D  ++ +  +   D +       W  ++P +   ++ A+  EG++   +V
Sbjct: 136 FGLTEPDFGSDPGSMITHFKDAGDHVILNGAKMWISNAPFAQIAVVWAKDEEGKIRGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R +E     G      K K   R++AT EL F N       +L D     GP+  +   
Sbjct: 196 ERGME-----GFSTPETKGKWSLRASATGELVFDNVKVPKENILPDAKGLKGPLSCLSSA 250

Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            Y       V+G  +   + A+ YA+ R   G  +    + ++ +A++  +I  A  +++
Sbjct: 251 RY--GIAWGVTGAAMDCYDIALRYAKERIQFGKPIAGFQLTQKKLAEMVTEITKAQLMNW 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RL    +E K+ + + + A+  A       C++A  +  +A + +GG G   E  I RH
Sbjct: 309 RLGVLKNEGKATAAQISMAKRNA-------CEIATRIARDARQILGGMGITGEYPIMRH 360


>gi|257388948|ref|YP_003178721.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257171255|gb|ACV49014.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 389

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 40/280 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI--------YCLSGHK-WFLSSPMS 240
           P+ +        L+E   G+D+ A+ +  + +            Y + G K W  +  ++
Sbjct: 113 PLAEGEEIGAFALSEAGAGSDVPAMETTAKPVGGDPHEGEEPDEYVVDGGKLWISNGSVA 172

Query: 241 DAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D  ++ A+ +   G       V R  ED   +G   +  ++K+G++   T EL F +   
Sbjct: 173 DTVVLFAKTDPEAGNKGISSFVVRPEED---DGFHVEGTEHKLGDKGCPTAELRFDDMH- 228

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILID 351
            L  D  +       +  L  L+   ++++   V +A     EA+ YA  R        D
Sbjct: 229 -LPADRRLGEAGRGFVHALKTLNGGRITIAARGVGIAQAALDEALDYAGERE-----QFD 282

Query: 352 QPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           QP+     ++  +AD+     AA  L  + A+     ++  +EAA A++       +  +
Sbjct: 283 QPIGDFQAIQHKLADMDTKTEAARMLMHKAADKKIRGENFVKEAAQAKL-------YASE 335

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  V  E ++  GG GY ++  + R YR++  N I  G+
Sbjct: 336 VSREVANEGIQIHGGYGYTKDFPVERFYRDAKLNEIYEGT 375


>gi|58259503|ref|XP_567164.1| Isovaleryl-CoA dehydrogenase 2 mitochondrial precursor
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223301|gb|AAW41345.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 417

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF- 256
           L ++E   G+D+ ++ +   +  +G  + ++G K W  ++P+S  F++ A+ +  V    
Sbjct: 153 LAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 212

Query: 257 -LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +   L+E G   G       +K G R + T EL F N     + + NV  G V +  ++
Sbjct: 213 GMTAFLVEKGW-KGFEVGEGLDKFGMRGSPTAELFFDNV---KIPEENV-LGKVGNGALV 267

Query: 316 IY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   LD   + +SG     M+ +L  A+ Y   R   G  +    +M+  +AD+   ++A
Sbjct: 268 LMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLMQGKLADMYTKLSA 327

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A  + +A + D       + A A +       +    A  V  EA +C+GG+GYI + 
Sbjct: 328 SRAYVYAVARACDAGMISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYINDY 380

Query: 429 SIARHYRESPANSILLGS 446
              R  R+S   ++  G+
Sbjct: 381 PAGRLVRDSRLYTVGAGT 398


>gi|299068196|emb|CBJ39415.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CMR15]
          Length = 393

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 28/288 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              IG L ++E   G+D+ ++  + ++  D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAERRGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++  + E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338
            T EL F N       +LG+ N  T  +  M  L Y + A++S   +  M+  +     Y
Sbjct: 214 HTGELVFDNVEVPAENILGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  IAD+   + A  A  + +  + D A  R       +  A 
Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  Y   + A  +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|296283477|ref|ZP_06861475.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium
           bathyomarinum JL354]
          Length = 403

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 20/262 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           + +TE   G+D+  I ++     DG Y LSG K F+++   ++  I++A+     G  G 
Sbjct: 145 IAMTEPGAGSDLQGIRTRAVADGDG-YRLSGQKTFITNGQQANLIIVVAKTNPDAGSKGI 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            L   ++E     G    +  +KIG     T EL F N +     L+G      G  + M
Sbjct: 204 SLF--VVETDDAEGFSRGKNLDKIGTEMGDTSELFFDNVYLPADNLIGG-EEGQGLYQLM 260

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K L    L  A  S++ +  +LAE I Y  +R   G  ++     +  +A+   +  A  
Sbjct: 261 KELPKERLIIACESLAIIEAALAETIAYVSQRKAFGKSILQFQNTEFKLAECKTE--AVI 318

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A +F      DE   R  +   +   A + KYW  + A  ++    +  GG GY+ E  I
Sbjct: 319 ARTF-----IDECIVRLIDGRLSAEYASMAKYWVSEAAQRIVDTCQQMFGGYGYMSEYPI 373

Query: 431 ARHYRESPANSILLGSGNAMVL 452
           A+ Y++     I  G+   M L
Sbjct: 374 AQMYKDVRVKRIYGGTTEIMKL 395


>gi|296808389|ref|XP_002844533.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238844016|gb|EEQ33678.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 435

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 33/299 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           V K W P++               T       L+E   G+D  A+ ++ +K S G Y L+
Sbjct: 158 VKKKWLPRL--------------ATDTVGSFCLSEPISGSDAFALQTKAEKTSSG-YKLN 202

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K W  +S  +  FI+ A ++   G   +   + +    G    + + K+G R+++T  
Sbjct: 203 GSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIVEKDMPGFNIAKKEKKLGIRASSTCV 262

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARR 341
           L F +     +   N+     +  K  I  L+   + ++     LA       A +    
Sbjct: 263 LNFDDV---EVPKENILGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYIWND 319

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G ++     M+  +A    +IAAA AL F  A   +  +   ++AA A++      
Sbjct: 320 RKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNAARKKEAGQDFVQDAAMAKL------ 373

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 374 -YASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKTLQK 431


>gi|115360512|ref|YP_777649.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
 gi|115285840|gb|ABI91315.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
          Length = 1292

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 19/271 (7%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255
              +TE   G+ + AI S+ Q+   G + ++G+K W  SS  +   + F   A   G VG 
Sbjct: 754  FAITEPAAGSHVRAIASRAQRTESGDWLVTGNKRWSGSSAWAGIINVFARQADGTGMVGL 813

Query: 256  FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313
             + P     G+P   +  + L   +      ++ L+ +  +  + LGD+       +   
Sbjct: 814  AVRP-----GTPGVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMLVAQHAM 868

Query: 314  ILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A + V GM+   A+ +H Y  RR V  G+L+D P+ +  + ++   I    AL
Sbjct: 869  NIARLGIAAVCVGGMK-RCAQLMHRYGARRQVGTGLLLDNPLSRLRLGELRDRIDGLDAL 927

Query: 373  SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               LA   D   +  E+         I+K    ++      E M+ +GG GYIE     +
Sbjct: 928  VEHLAAELDLGVAVPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAPQ 981

Query: 433  HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +R++    I  G    +++ + + L  G++
Sbjct: 982  IFRDARLTRIFEGPTETLLVHLGSRLLNGSD 1012


>gi|255318756|ref|ZP_05359982.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255304012|gb|EET83203.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 390

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 30/281 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              +G L ++E   G+D+ ++T +  +  D  Y L+G K
Sbjct: 115 YLPKLVSGEY--------------VGALAMSEPNAGSDVVSMTLRADQKGD-HYVLNGSK 159

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D  ++ A+ + + G   +   L +    G  + +  +K+G R + T  L F
Sbjct: 160 MWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDMKGFSHGQHLDKLGMRGSNTYPLFF 219

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
            +     +   NV  G    +K+L+  LD     +SG  + + +A     + Y   R   
Sbjct: 220 DDC---KVPAENVLGGVGNGVKVLMSGLDYERAVLSGGPLGIMDACLDIVMPYLHERKQF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L +  +M+  IAD+     A  AL + +  + D    R++     R  A     +  
Sbjct: 277 GQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD----RADHGRALRKDAASAILYSA 332

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  +  EA++ +GG+GYI + +  R +R++    I  G+
Sbjct: 333 EKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGAGT 373


>gi|254482196|ref|ZP_05095437.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037521|gb|EEB78187.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 393

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 20/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ + + DG Y +SG K W  +SP +D F++ A
Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMVTRARSV-DGGYSVSGAKMWITNSPFADVFVVWA 185

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  + ++  F    +LE G  +GL   +++ K+  R++ T E+     F     LL ++ 
Sbjct: 186 KTDDDKIRGF----ILEKGM-DGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVE 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP   +    Y   A  S+         A  Y   R   G  L  + +++  +AD+ 
Sbjct: 241 GLKGPFGCLNNARY-GIAWGSLGAAETCWHAARQYTMERKQFGVPLASKQLVQLKLADMQ 299

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I+ A     R     D      E       +  + K   C  + A+   A + +GG+G
Sbjct: 300 TEISLALQGCLRAGQLMDAGDIAPE-------LISLIKRNSCGKSLAIARTARDMLGGNG 352

Query: 424 YIEERSIARH 433
             +E  I RH
Sbjct: 353 ISDEYPIMRH 362


>gi|170062288|ref|XP_001866603.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880245|gb|EDS43628.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 629

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 158/386 (40%), Gaps = 63/386 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE------- 250
             LTE   G+D  +I  +  K +DG  Y L+G K W  +  ++D F + AQ E       
Sbjct: 189 FALTEPSSGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIADIFTVFAQTEVVDAKTG 248

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300
               +V  F+V R    G  NG      +NK+G + + T E+ F        N  G    
Sbjct: 249 QKRDKVTAFIVERGF-GGVSNG----PPENKMGIKCSNTAEVYFEDCKIPAENVLGQEGD 303

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              V+   + + +  +   SA +S + MR  + +A  +A  R   G  L     ++  +A
Sbjct: 304 GFKVAMNILNNGRFGM---SATLSGT-MRACIQKAAEHATNRVQFGRKLETYGGIQEKLA 359

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            +A+   A  ++++ ++ + D        EAA +++ A  + ++ C        EA++ +
Sbjct: 360 RMAMHHYATQSMAYMISGNMDSGSVDYHLEAAISKVFASESAWYVCD-------EAIQIL 412

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-----------LNLLEKGTN----- 463
           GG G++++  + R  R+     I  G+ + + L V           L  L+K        
Sbjct: 413 GGMGFMKDTGLERVMRDLRIFRIFEGTNDILRLFVALTGIQYAGGHLKELQKAFKNPAAN 472

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA--AALY 518
              +F++      +  G  G  +   + D +      K  AR  +E I L   A  + L 
Sbjct: 473 LGLIFKEGSRRAARSFGMGGTDLTPFVADQL------KDAARQCSESIDLFGQAVESLLI 526

Query: 519 RAGMNDIADVFLENRFLDNCHSTHCM 544
           + G   + + ++ NR  D    T+ M
Sbjct: 527 KHGKGIVEEQYMLNRLADAAIDTYAM 552


>gi|186473917|ref|YP_001861259.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184196249|gb|ACC74213.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 377

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   I ++   + DG + ++G K F++    + ++  F +     G+ G   
Sbjct: 125 LTEPHAGSEANNIRTRA-VLRDGQWVINGSKQFVTNGSRASIAIVFAVTDPEAGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    R ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGRPESKLGIRASDTCPISLDDC---AVPEANLLGAPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   + +A A       YA  R   G  L +   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQAIGIARAAFDAARVYANERIQFGKALKEHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      +    EA+ A       K +  +MA  V ++A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRSAGRPCLSEASQA-------KLYASEMAEEVCSKAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|254254574|ref|ZP_04947891.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158]
 gi|124899219|gb|EAY71062.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158]
          Length = 393

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 17/256 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDPEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310
              + +    G    +  +K+G R + T EL F        N  G L G + V  +G   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLNGGVKVLMSGLDY 247

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L    + IM+       L   + Y   R   G  + +  +++  +AD+     A  
Sbjct: 248 ERAVLAGGPTGIMAAC-----LDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACR 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +    D A S  E     R        +  + A  +  EA++ +GG+GYI E  +
Sbjct: 303 AYLYAVGRHLDSAGS--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPV 360

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 361 GRLWRDAKLYEIGAGT 376


>gi|222106869|ref|YP_002547660.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221738048|gb|ACM38944.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 391

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 23/281 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           SM+++ ++  +H  +A   +  E       P   +   IG  GLTE   G+D   + ++ 
Sbjct: 95  SMMSVQSSLVIHPIFA---YGSEEQKDKYLPGLVSGELIGCFGLTEPDAGSDPGGMKTRA 151

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +KI  G Y L G K W  ++P++D F++ A+ E   G  +   +LE G   GL   ++  
Sbjct: 152 EKIEGG-YRLRGSKMWISNAPIADVFVVWAKSEAHDGA-IRGFVLEKGM-KGLSAPKIGG 208

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334
           K+  R++ T E+      G  +G+  +  G          L+ A   +S   +  AE   
Sbjct: 209 KLSLRASITGEIVMD---GVEVGEDALLPGVSGLKGPFGCLNRARYGISWGVMGAAEDCW 265

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             +  Y   RH  G  L    + ++ +AD+  +IA     S R+    DE K   E    
Sbjct: 266 VRSRQYGLDRHQFGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHKHAPE---- 321

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              M  + K   C  A  +   A +  GG+G   E  + RH
Sbjct: 322 ---MISLIKRNNCGKALDIARMARDMHGGNGIQIEYHVMRH 359


>gi|254467375|ref|ZP_05080786.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206688283|gb|EDZ48765.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 382

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 44/316 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           GH +   + +  ++A  T  +  + W PK+ + E             +   L +TE   G
Sbjct: 89  GHGIHSGIVAHYILAYGTEEQKQR-WLPKMVTGE-------------LVGALAMTEPSTG 134

Query: 209 TDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ----VEGRVGCFLVPRLLE 263
           +D+ AI ++   + DG  Y LSG K F+++      I++A       G  G  LV   +E
Sbjct: 135 SDVQAIKTKA--VKDGNAYRLSGQKTFITNGQHANLILVAAKTDPAAGAKGVSLVA--VE 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILI 316
                G    R  +KIG  +  T EL FS       N  G   G      G  + M+ L 
Sbjct: 191 TDGAAGFSRGRNLDKIGCHAADTSELFFSDVEIPPENILGGAEGQ-----GFYQMMQQLP 245

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  +V  M  ++   + Y + R   GG ++     +  +A+       A A   
Sbjct: 246 QERLIIACGAVGAMEGAVERTVAYCKEREAFGGPILQFQNTRFKLAECLTKTKVARAF-- 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 DE  +   E   +   A + KYW       V+ E ++  GG GY++E ++   +
Sbjct: 304 -----LDECIAEHLEGRLSVEKAAMAKYWITDTQGEVLDECLQLHGGYGYMQEYAVGEMW 358

Query: 435 RESPANSILLGSGNAM 450
            ++    I  G+   M
Sbjct: 359 ADARVQRIYGGTNEIM 374


>gi|332285966|ref|YP_004417877.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429919|gb|AEC21253.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 396

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 23/278 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+F +E       P     +     LTE   G+DI  + ++  +  D  + + G K F++
Sbjct: 108 KLFGQESLRQRYLPAFAQGLLSSYALTEASHGSDIRTLDTKAHRKGDE-WVIQGEKHFIT 166

Query: 237 SPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--IGNRSNATVELEFSN 293
           S  + + FI+LA+ E  V  F VPR +      GL     +N    G R+   + ++  N
Sbjct: 167 SATAAELFIILAETEVGVSVFAVPRDIA-----GLSMYEGQNSATFGLRNGPHMNVKLDN 221

Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                  ++G      G  + + +L Y  +    +S+   R +   A+ +AR R      
Sbjct: 222 VRLPLDHMIG--QEGKGVRQAVTVLNYSRTMAGAISLGVARAAFEGALAFARDRKAFDQR 279

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++D   ++   AD+  +I AA  L +R A + D     S   + A++ A       C +A
Sbjct: 280 VLDFQGIQWYFADMLTEIDAARLLIYRAAAALDSNDQISRWGSEAKLKA-------CAIA 332

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V ++A +  G  G +      R+ R++ A  I  GS
Sbjct: 333 TQVASQAAQICGAYGIMVNAPFGRYLRDAKAYEIAGGS 370


>gi|296139562|ref|YP_003646805.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027696|gb|ADG78466.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 385

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 33/277 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQ 248
           M        + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+
Sbjct: 115 MASGETMFAIAMTEPGTGSDLAGMKTTAKLSADGSHYVLNGAKTFITGGVNADRVIVCAR 174

Query: 249 V------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
                  + R G  L    + D +  G    R  +KIG R++ T EL F++       LL
Sbjct: 175 TAPATEDDRRFGISL---FVVDTTLAGYEVGRKLDKIGLRTSDTAELSFTDVAVPAADLL 231

Query: 300 GDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           G+ N   G      P E + I +       S +   V  A+A  Y + R + G  +    
Sbjct: 232 GEENKGFGYLGQNLPQERLSIAV----GAYSQASAAVRFAQA--YTQDRTIFGKSVA--- 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
               +  +   ++AA  A    + +S D      +        A   K +C + A  VI 
Sbjct: 283 ----SFQNTKFELAACKAKVDAMESSVDRGLELHDAGELTAADAASLKLFCTEAASDVID 338

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++  GG GYI E  IAR Y ++  N I  G+   M
Sbjct: 339 RCLQLHGGYGYINEYPIARLYADNRVNRIYGGTSEVM 375


>gi|183984001|ref|YP_001852292.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183177327|gb|ACC42437.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 397

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 26/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRV 253
           ++E   G+D+AAI ++  + +DG Y + G K +L++  S   + +        AQ    +
Sbjct: 129 MSEPELGSDVAAIRTRATRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGAAQPHRNL 188

Query: 254 GCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             FLV +    G    GL      +K+G +   T EL F + +     D+   T      
Sbjct: 189 TAFLVEKPTGFGEVLPGLTIPGKIDKLGYKGIDTTELIF-DGYRATADDILGGTPGQGFF 247

Query: 313 KILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +++  ++   ++VS      G+R +   A+ YA++RH  G  + +   +   +A++A  +
Sbjct: 248 QMMDGIEVGRVNVSARACGVGLR-AFELAVRYAQQRHTFGKPIAEHQAISFQLAEMATKV 306

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  +          + A + KY   +    V  ++    GG GY +
Sbjct: 307 EAAHLMMVHAARLKDSGERND-------VAAGMAKYLASEYCSEVTQQSFRIHGGYGYSK 359

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  I R  R++P   +L+G G + +
Sbjct: 360 EYEIERLMRDAPF--LLIGEGTSEI 382


>gi|41407011|ref|NP_959847.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395362|gb|AAS03230.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 16/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L+ E G+P G    R  +K+G RS+ T EL +++       L+G  N     +    + 
Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  
Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +       ++    +  +A+  A     W       V  +A++  GG GY+ E  + R Y
Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     + +G G   +L  L+
Sbjct: 355 RD--MRILGIGGGTTEILIALS 374


>gi|58581140|ref|YP_200156.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623065|ref|YP_450437.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58425734|gb|AAW74771.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367005|dbj|BAE68163.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 391

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A
Sbjct: 126 PEMATGRVIGCFGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWA 184

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +  V  FLV     +    G     + +K+  R++ T  L   N F      L  + G
Sbjct: 185 HTDDGVRGFLV-----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAG 239

Query: 308 PVEDMKILIYLDSAI-MSVSGMRVS-LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I   V G  V+ L EA+ YA  R + G  L      +  +AD+A  
Sbjct: 240 LKAPLSCLNQARYGIAWGVIGAAVACLREALTYAGERILFGRPLAATQSAQIKLADMARG 299

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I+ A  L+ +L    +    R E+ + A       K+  C+MA  V  E  + +G +G  
Sbjct: 300 ISTAQLLALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGIT 352

Query: 426 EERSIARH 433
            E    RH
Sbjct: 353 TEHVAIRH 360


>gi|33591834|ref|NP_879478.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571477|emb|CAE44966.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381251|gb|AEE66098.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 386

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 40/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           +G +E   G+D++ I +  ++  D  Y ++G K W  +    D   +L       G    
Sbjct: 123 IGASEASAGSDVSQIKTWARRDGDD-YVINGSKMWITNGVQGDWICLLCNTSQEGGPHKN 181

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PV 309
               +VP         G+   R  +K+  R++ T EL F         D+ V        
Sbjct: 182 KSLIIVPL-----DTPGVSVSRKLDKLVLRASDTAELFFD--------DVRVPVSNRIGA 228

Query: 310 EDMKILIYLDS-----AIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E+M  +  ++        ++  GMR     + E I YA +R V GG ++   V+   +A 
Sbjct: 229 ENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQ 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I A  +L +R    + + +  ++       +A + KY   +++  +  E ++  GG
Sbjct: 289 MQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G + E  I+R YR+    +I  G  N ++L+V+
Sbjct: 342 QGVMNENWISRAYRDLRQTAI-GGGANEIMLEVI 374


>gi|325283450|ref|YP_004255991.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315259|gb|ADY26374.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 411

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 38/281 (13%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252
           GLTE   G+D A + +  ++  DG + L+G K F++   +   +++LA+     EG+   
Sbjct: 146 GLTEPGSGSDSAGLQTNAKEQPDGSWILNGSKNFITQGSVGGTYVILARTDPPREGKGKN 205

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  F+  R        G    R ++K+G RS+ T +L F +       LLG+   +  
Sbjct: 206 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPAEALLGERGNAFK 261

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADI 362
            V  M++L   D   + +  M + L  A   YA R    R   G  L     +   +A++
Sbjct: 262 DV--MRVL---DGGRVGIGAMGLGLGRAAFEYAARYTLEREQFGKPLAYNQNIAFRLAEM 316

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L  + A+  D  +  +   A A+  A +     C        EA++ +GG 
Sbjct: 317 DTKLEAARLLIRKAADLKDAGQPFTIPVARAKYYATVVGVEACD-------EAIQMLGGY 369

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL----DVLNLLE 459
           GYI+E  + R +R++    I  G+     L    DVL   E
Sbjct: 370 GYIKEYPVERFWRDNRLTRIGEGTDEVQRLVISRDVLKRFE 410


>gi|294651523|ref|ZP_06728833.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822587|gb|EFF81480.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 387

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257
           L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   
Sbjct: 127 LAITEPGGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEG 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +  LL D    G+    LK K+G  ++ T  L F         LLG  N     + +   
Sbjct: 186 ISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENSGFKVIMNNFN 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL-- 372
           +      +++     V   EA+ +A++R   G  L+D  V++  + D+A  +    AL  
Sbjct: 245 MERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLE 304

Query: 373 --SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             ++++     +      + +  + +A  T  +C          A++ +GG G++     
Sbjct: 305 ETAWKMTQPQLQGADLVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 357

Query: 431 ARHYRESPANSILLGSGNAM 450
            R YRE   N I  G+   M
Sbjct: 358 ERIYREVKVNMIGGGAEEIM 377


>gi|187926160|ref|YP_001892505.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665648|ref|YP_002984007.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187727914|gb|ACD29078.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867675|gb|ACS65335.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 377

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T  AIG   LTE   G++   + ++   + DG + L+G+K F+++
Sbjct: 101 FGTEAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRA-VLRDGKWVLTGNKQFVTN 159

Query: 238 -PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              +D  I+ A  +   G      F+VP      +P G    R ++K+G R++ T  +  
Sbjct: 160 GARADIAIVFAVTDPEAGKRGISAFIVP----TDTP-GFHVGRPEHKLGIRASDTCPITL 214

Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                   N  G     L ++   +E  +I I    A  +V   R +   A +YA  R  
Sbjct: 215 EDCAVPEENLLGERGEGLKIALSNLEGGRIGI----AAQAVGIARAAFDAARNYANERIQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L +   +   +AD+A  + AA  L    A      K    EA+ A       K + 
Sbjct: 271 FGKALREHQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYA 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++A  + + A++  GG GY+ + ++ RHYR++    I  G+
Sbjct: 324 SELAEEICSNAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|116254738|ref|YP_770574.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115259386|emb|CAK10521.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 381

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 124 LAMSEVGAGSDVVSMRLRAEKKGD-RYILNGTKFWITNAPHADVLVVYAKTDPAAGPKGI 182

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
              ++E G P G    +  +K+G R + T EL F +       L+G         E +KI
Sbjct: 183 SAFIIEKGLP-GFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREG------EGVKI 235

Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD     ++G     M+  L   + Y R R   G  + D  +M+  IAD+ + + +
Sbjct: 236 LMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKAIGDFQLMQGKIADMYVALNS 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A  + +A + D  ++   +AA A + A        + A  V  EA++ +GG+GY +E 
Sbjct: 296 ARAYVYSVARACDAGRATRTDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEW 348

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 349 PVERFLRDAKLYDIGAGT 366


>gi|104781960|ref|YP_608458.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95110947|emb|CAK15665.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 383

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 48/314 (15%)

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205
           G LMS   SV    ++A   TP   + W P++ + E               IG   LTE 
Sbjct: 85  GALMSIHNSVGCGPLLAY-GTPEQQQAWLPRLATGE--------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G      FLVP
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAKLAIVFAVTDPELGKKGLSAFLVP 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312
                 +P G    R ++K+G R++ T  +   N       LLG+    L ++   +E  
Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTLDNCRIPAANLLGERGKGLAIALSNLEGG 243

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + I AA  L
Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQINAARLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  + +
Sbjct: 300 ILHAARLRTAGKPCLSEASQAKLFA-------SEMAERVCSMAIQVHGGYGYLEDYPVEK 352

Query: 433 HYRESPANSILLGS 446
           +YR++    I  GS
Sbjct: 353 YYRDARITQIYEGS 366


>gi|91218198|ref|ZP_01255146.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
 gi|91183656|gb|EAS70051.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
          Length = 402

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 44/300 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D+ AI +      D  Y ++G K F+++  MSD  I+  + +   G   V
Sbjct: 130 IGMTEPNCGSDLQAIKTNAVDKGDH-YLVNGQKTFITNGYMSDMSIVAVKTKMGTGEEGV 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ + S  G        KIG ++  T EL F N       LLG+  +        KI+
Sbjct: 189 SLLIMESSFKGFEKGTPFKKIGMKAQDTCELFFDNVKVPKENLLGEEGLG------FKIM 242

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
           +       L  A+ ++ G   ++ + + Y   R         QP+      +  +A+   
Sbjct: 243 MTELARERLTVALNAIGGAEGAIEKTLAYTSTRTA-----FKQPIAGFQNTQFKLAECTT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +    A   R      + K  +E A+ A       KY   +M   V+ E ++  GG GY
Sbjct: 298 QLQVHQAFLDRCTLLVSKHKLTAESASMA-------KYSATEMHGKVVDECLQLFGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           I +  IAR Y ++    I  G+   M L    L+ +G  LF+ LF    Q + ++ KK I
Sbjct: 351 IWDYPIARMYADNRVARIYAGTNEIMKL----LIARG--LFKDLF----QQMKATKKKTI 400


>gi|281354503|gb|EFB30087.1| hypothetical protein PANDA_011372 [Ailuropoda melanoleuca]
          Length = 405

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 39/280 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P   +   IG L +TE   G+D+  I +  +K  DG  + L+G K F+++  +SD  I++
Sbjct: 134 PQMTSGKCIGALAMTEPGAGSDVQGIRTNAKK--DGSDWILNGSKVFITNGWLSDVLIVV 191

Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           A            +  FLV    E G    +  Q+L+ K+G ++  T EL F +      
Sbjct: 192 AVTNHEAHSPAHGISLFLV----ESGMKGFIKGQKLQ-KMGLKTQDTAELFFEDVRLPAS 246

Query: 297 FLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            LLG+ N      +   P E + I      A +++S       E  +Y + R   G  + 
Sbjct: 247 ALLGEENKGFYYLMQELPQERLLI------ADLAISASEFMFEETRNYVKERKAFGKTIA 300

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +A++   I    A         D      E+       A + KYW  ++   
Sbjct: 301 HMQTVRHKLAELKTQICVTRAF-------VDSCLQLHEKKRLDSATASMAKYWASELQNR 353

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V  + ++  GG GY+ E  IA+ Y ++ A  I  G+   M
Sbjct: 354 VAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIYGGTNEIM 393


>gi|260802288|ref|XP_002596024.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae]
 gi|229281278|gb|EEN52036.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae]
          Length = 1110

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 42/271 (15%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            L ++E   G+D+ ++ ++ +K  D  Y L+G K W  + P +D  ++ A+ E        
Sbjct: 810  LAMSEANAGSDVVSMRTKAEKHGD-YYVLNGTKFWITNGPDADTLVVYAKTEPHADKPQH 868

Query: 253  -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
             V  F++ R +E     G       +K+G R + T EL F +       +LG +N     
Sbjct: 869  GVTAFIIERGME-----GFSTSPKLDKLGMRGSNTCELVFEDCKVPASHVLGQIN----- 918

Query: 309  VEDMKILI--------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             + + +L         +L +  + V  M+  L   + Y   R   G  +    +M+  +A
Sbjct: 919  -KGIYVLFSGLDIERCFLAAGPLGV--MQSVLDVTVPYLHTREAFGQKIGTFQMMQGKMA 975

Query: 361  DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            D+   ++   +  + +A + D      ++ A A + A        + A  V  + ++C+G
Sbjct: 976  DMYTQLSVCRSYVYNVARALDRGCIIPKDCAGAILFA-------AECATKVALDGIQCLG 1028

Query: 421  GSGYIEERSIARHYRESPANSILLGSGNAMV 451
            G+GY+ +    R  R++    I  G+G + V
Sbjct: 1029 GNGYVNDYPTGRFLRDAKLYEI--GAGTSEV 1057


>gi|89100684|ref|ZP_01173541.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89084630|gb|EAR63774.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 594

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S+T  + V + + P V       +F  E       P+  T   I    LTE   G+D   
Sbjct: 109 SITHGAHVGIGSLPIV-------LFGDEEQKQKYLPLLATGEKIAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  ++  +D F++ A+V+G     F+V R        G+
Sbjct: 162 AKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKVDGEHFSAFIVER-----EYPGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G +S++T  L   +       LLG+L    G +    IL        + +V
Sbjct: 217 STGPEEKKMGIKSSSTRTLILEDAQVPKENLLGEL--GKGHIIAFNILNIGRYKLGVGAV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +    + Y  +R      +    + K  +A++A  + AA +  +R    F++  S
Sbjct: 275 GASKRAYEVTVQYTNQRQQFKTPISQFNLTKEKLANMAAKLYAAESSVYRTVGLFEDRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           R +EE            A YA I   + K++  ++   +  E ++  GG G++ E  I R
Sbjct: 335 RLTEEEVKNGKEVANSIAEYA-IECSLNKFFATEVLDYIADEGVQLHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 IYRDSRINRIFEGT 407


>gi|256425244|ref|YP_003125897.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256040152|gb|ACU63696.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 379

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 118/289 (40%), Gaps = 35/289 (12%)

Query: 174 WAPKIFSREYDPTNK-APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + +  E        P+ K  +     L+E   G+D  +  ++ +   D  Y ++G K
Sbjct: 96  WGLETYGTEEQKQQYLVPLAKGEITGAFLLSEPEAGSDATSQRTKAEDKGDH-YLVNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +  ++++AQ     G   +  L+ + +  G+     +NK+G R         
Sbjct: 155 NWITNGSSASVYLVIAQTHVEKGSKGINALIIEKNSPGVVVGAKENKMGIRG-------- 206

Query: 292 SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIH 337
           S+T   +  D+ V   P E+   +       A+ +++G R+ +A             A+ 
Sbjct: 207 SDTHSIMFQDVKV---PKENRIGEDGFGFKFAMKTLAGGRIGIASQALGIASGAYELAVK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +     ++  +AD+A  I A+  L  + A   D     +   + A++ +
Sbjct: 264 YAKERKAFGKEISQHQAIQFKLADMATRIEASRLLCLKAAREKDLHLDYTLSGSMAKVFS 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             T  W       V  EA++  GG GY++E  + R  R++    I  G+
Sbjct: 324 SETAMW-------VTTEAVQVHGGYGYVKEYHVERLMRDAKITQIYEGT 365


>gi|124268354|ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124261129|gb|ABM96123.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 422

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ + +  G Y LSG K W  +SP++D F++ A+ + G++  F+
Sbjct: 166 FGLTEPNHGSDPGSLATRARAVQGG-YVLSGAKMWITNSPIADVFVVWAKDDGGQIRGFI 224

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +     D    GL    +  K+G R++ T E+     F        ++    GP      
Sbjct: 225 L-----DKGMKGLEAPAVHGKVGLRASLTGEIVMDEVFCPEENAFPEVRGLKGP------ 273

Query: 315 LIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+SA   ++   +  AE   H AR+    R   G  L    ++++ +AD+  +I   
Sbjct: 274 FTCLNSARYGIAWGALGAAEDCFHRARQYVLDRPQFGRPLAANQLIQKKLADMQTEITLG 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE  +  E       +  I K   C  +  +   A + +GG+G  +E  
Sbjct: 334 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLEIARMARDMMGGNGISDEFG 386

Query: 430 IARH 433
           +ARH
Sbjct: 387 VARH 390


>gi|86751041|ref|YP_487537.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574069|gb|ABD08626.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris HaA2]
          Length = 390

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  + L+G+K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGM 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  +   + Y   R   G  +    +++  IAD+ + + A+ A
Sbjct: 250 ERAVL----AAGPLGIMQACMDVVMPYVHERKQFGEPIGTFQLVQAKIADMYVTMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGQTTREDAAGAILYAAEKATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|51894146|ref|YP_076837.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863]
 gi|51857835|dbj|BAD41993.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863]
          Length = 589

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 124/310 (40%), Gaps = 62/310 (20%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ + E+                  LTE   G+D     +  +   DG Y
Sbjct: 127 TPEQKAKYLPKLATGEW-------------VAAYALTEPNAGSDALGARTTARLSEDGKY 173

Query: 227 -CLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             L+G K W  ++  +D F++ A+V+G +   F+V R        G+     + K+G   
Sbjct: 174 WILNGTKQWITNAGFADVFVVYAKVDGEKFSAFIVERNF-----PGVSIGPEEKKMG--- 225

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--------------SVSGMR 329
                L  S+T   +L D  V   PVE++   I     I               +V   +
Sbjct: 226 -----LHASSTCSLILEDAKV---PVENLLGEIGKGHVIAFNILNIGRWKLGAGTVGSSK 277

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----------- 378
           + LA +I YA+ R   G  + +   +++ +AD+A+      ++ +R A            
Sbjct: 278 MVLATSIEYAKTRKQFGKPIAELRAIQQKLADMAVRTYVTESMGYRTAGLLDSSLSDLDP 337

Query: 379 --SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                E   R EE A   +   I K +  +    V  E ++  GG G+++E +++  YR+
Sbjct: 338 NADMREVGKRLEEYA---MECSIMKVFGSEAFDFVADEGVQIHGGYGFMDEYAVSMAYRD 394

Query: 437 SPANSILLGS 446
           S  N I  G+
Sbjct: 395 SRINRIFEGT 404


>gi|327352743|gb|EGE81600.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 433

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 45/298 (15%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  + + DG + L+G K W  +
Sbjct: 142 NGSPEQKARFLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITN 200

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F   F 
Sbjct: 201 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEGVFV 260

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG+LN        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 261 PRENMLGELN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGI 314

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----------RSEEAAYARIMA 397
            +    +++  +AD+   ++A+ A ++  A   DEA +          R+++ A A + A
Sbjct: 315 PIARNQLVQGKLADMYTKLSASRAYTYTTARQIDEAAASSSEASNSAIRTQDCAGAILYA 374

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 C         +A++ +GG+GYI E    R  R++    I  G+G + +  +L
Sbjct: 375 AERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 423


>gi|157105307|ref|XP_001648811.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108869037|gb|EAT33262.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 420

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+  + ++ +K  D  Y L+G K W  +  +++ + +LA+      C     
Sbjct: 157 VTEPGAGSDVNGVKTRAEKKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 216 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGSGFKIAM 271

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ Y+  R   G  +     +   +AD+A+ +  A 
Sbjct: 272 GTFDKTRPPVAAGAVGLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETAR 331

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+ +  S         A I K +   MA  V ++A++  GG+G+  E  +
Sbjct: 332 LITMKSAWEVDQGRRNS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPV 384

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 385 EKLMRDAKIYQIYEGT 400


>gi|319952333|ref|YP_004163600.1| butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319420993|gb|ADV48102.1| Butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 380

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 39/291 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
           W  ++F+ E           T   IG   L+E   G+D  A + +   I  G  Y L+G 
Sbjct: 96  WGLEMFANEEQKQKYLTKLATGEMIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYLLNGT 153

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K W  +   +  ++++AQ +   G   +  L+ E G+P G      +NK+G R       
Sbjct: 154 KNWITNGSTAGVYLVIAQTDIEKGHKGINALIVEKGTP-GFEIGPKENKLGIRG------ 206

Query: 290 EFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------A 335
             S+T   +  D+ V   P E+   +       A+ ++SG R+ +A             A
Sbjct: 207 --SDTHSLMFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAGAYELA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  + +   +   +AD+  +I AA  L ++ A   D  K+    +A A++
Sbjct: 262 LKYSKERKSFGTEICNHQAIAFKLADMHTEIEAARLLVYKAALDKDNGKNYDLSSAMAKL 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  +  K+A     EA++  GG+G++++  + R  R++    I  G+
Sbjct: 322 -------YASKVAMDTTVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGT 365


>gi|306797293|ref|ZP_07435595.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006]
 gi|308342361|gb|EFP31212.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006]
          Length = 609

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 47/298 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S     +   + F ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G+ NG+    L++K+G +S+ T EL F        G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ +A+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D+A ++    A          ++ 
Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           PI K    + A  ++ E+++ +GGSG++ +  + ++ R++  +S+  G+     LD  
Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDAKIDSLYEGTTAIQALDFF 458


>gi|295695701|ref|YP_003588939.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411303|gb|ADG05795.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 594

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 47/275 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +     ++G  Y L+G K F+++   +D FI+ A+V+G +   F+V
Sbjct: 148 LTEPTSGSDALGAKTTAVLNAEGTHYILNGTKQFITNAGFADLFIVYAKVDGEKFTAFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI-- 314
            R    G P G+     + K+G + ++T +L        +L D+ V   PVE++  +I  
Sbjct: 208 ER----GFP-GVSTGPEEKKMGIKGSSTRQL--------ILEDVPV---PVENVLGQIGK 251

Query: 315 --LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             LI  +         A   V   +++LA +  YA+ R   G  + + P+++  +A +A+
Sbjct: 252 GHLIAFNILNIGRYKLAAGCVGSSKIALAMSAKYAKERSQFGKPIAEFPLIQNKLATMAV 311

Query: 365 DIAAATALSFRLANSFDEA-------------KSRSEEAAYARIMAPITKYWCCKMAPAV 411
              AA ++ +R    FD               ++ +    YA +   I K +  ++  AV
Sbjct: 312 RTFAAESVIYRTVGLFDRQLQDFDLTQDEVGMQAAAAIGEYA-LECSINKVFGSEVLDAV 370

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E ++  GG G+I E    R YR+S  N I  G+
Sbjct: 371 ADENVQIHGGYGFIAEYGAERIYRDSRINRIFEGT 405


>gi|262204023|ref|YP_003275231.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087370|gb|ACY23338.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 383

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 41/309 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++ L  T    + + P++ + E   T             + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLLTLFGTEEQKQTYLPRLATGEMRAT-------------MALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGRVGCFLVPRLLED 264
            ++T+  ++  D +  +SG K ++S+      I L       AQ   R G  +V  L E 
Sbjct: 133 QSMTTLAREEGDDL-VISGSKTWISNARRSGLIALLCKTDPKAQPRHR-GISIV--LCEH 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LD 319
           G   GL   R   K+G +   + EL F         +LG +    G  + MK L    + 
Sbjct: 189 GP--GLTVSRDLPKLGYKGVESCELSFDGYRVPRSAILGSV-AGKGFSQMMKGLETGRIQ 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  
Sbjct: 246 VACRALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQ 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D  +    EA  A++ A        ++A  +   A+   GG GY  E  I R++R++P 
Sbjct: 306 YDRGRRCDMEAGMAKLYA-------SEVAMEIALNAVRIHGGYGYSTEFDIERYFRDAPL 358

Query: 440 NSILLGSGN 448
             +++G G 
Sbjct: 359 --MIVGEGT 365


>gi|289613968|emb|CBI59202.1| unnamed protein product [Sordaria macrospora]
          Length = 438

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 29/256 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++       +Y LSG K W  +SP++D  ++ A
Sbjct: 165 MAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKKDVYLLSGAKTWITNSPIADVLVVWA 224

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           +++  G++  FLV R      P  L   ++KNK G R++ T  ++  N       +  ++
Sbjct: 225 KLQETGKIRGFLVER--SACPPGTLETPQIKNKTGLRASITGMIQLDNCPVPKENMFPEV 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
               GP         L+SA   ++ GM  +L + +  AR     R+   G  L    +++
Sbjct: 283 EGLKGP------FTCLNSARYGIAFGMMGALEDCLSRARTYALERKQFKGNPLAKYQLVQ 336

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +A+   D+A  T  + ++    DE K+  E       M  + K   C           
Sbjct: 337 KKLAEAITDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRTLYHARTLQ 389

Query: 417 ECIGGSGYIEERSIAR 432
           E  GG+   +E  I R
Sbjct: 390 EIFGGNAVSDEYHIGR 405


>gi|254384717|ref|ZP_05000055.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343600|gb|EDX24566.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 386

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 44/312 (14%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    ++W P++ S E             +    GLTE  GG+D     +   K  D
Sbjct: 102 LFGTEEQKREWLPRMCSGE-------------ILGAFGLTEPDGGSDAGGTRTTAVKDGD 148

Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274
             + ++G K F+++  +D    + +  V GR       +   +VP     G+P G     
Sbjct: 149 -EWVINGSKCFITNSGTDITGLVTVTAVTGRKADGRPEISSIIVP----SGTP-GFTVAA 202

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333
             +K+G  S+ T EL F +     L +L  + G     + L  LD   +++S +   LA 
Sbjct: 203 PYSKVGWNSSDTRELSFQDVR-VPLANLVGAEGRGY-AQFLRILDEGRIAISALATGLAQ 260

Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E++ YA+ R   G  + D   ++  +AD+ +  A    + +R      +A SR   
Sbjct: 261 GCVDESVKYAKERKAFGRPIGDNQAIQFKLADMEMR-AHMARIGWR------DAASRLVA 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +  A I K +   +A     +A +  GG G++ E  +AR +R+S    + +G G +
Sbjct: 314 GEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGEGTS 371

Query: 450 MVLDVLNLLEKG 461
            V  +L   E G
Sbjct: 372 EVQRMLIARELG 383


>gi|152125905|gb|ABS29300.1| butyryl-CoA dehydrogenase [Fusobacterium necrophorum]
          Length = 303

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 37/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD------IAAITSQGQKISDGIY 226
           W    F  E       P   +   IG  GLTE   GTD      IA      Q+     +
Sbjct: 18  WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTDASGQQTIAVFDEATQE-----W 72

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F+++   +  +++ A  +   G   +   ++E G+P G    + + K+G R +
Sbjct: 73  VINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEAGTP-GFSIGKKEKKLGIRGS 131

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335
           AT EL F +       LLGDL       +  KI ++ LD   + ++   + LA     EA
Sbjct: 132 ATCELIFEDVRLPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 185

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  L         +A++ + + AA  L ++ A         + +AA A++
Sbjct: 186 VQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWKESNHLPYTVDAARAKL 245

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 246 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 289


>gi|94469208|gb|ABF18453.1| mitochondrial medium-chain acyl-CoA dehydrogenase [Aedes aegypti]
          Length = 422

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+  + ++ +K  D  Y L+G K W  +  +++ + +LA+      C     
Sbjct: 159 VTEPGAGSDVNGVKTRAEKKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 218 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGSGFKIAM 273

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ Y+  R   G  +     +   +AD+A+ +  A 
Sbjct: 274 GTFDKTRPPVAAGAVGLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETAR 333

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+ +  S         A I K +   MA  V ++A++  GG+G+  E  +
Sbjct: 334 LITMKSAWEVDQGRRNS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPV 386

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 387 EKLMRDAKIYQIYEGT 402


>gi|18312597|ref|NP_559264.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160066|gb|AAL63446.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 410

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 25/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254
             +TE   G+D+A I ++ +K  D  + ++G K F+SS  ++D FI+LA+     + +V 
Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKKGDK-WVINGRKAFISSSDVADFFIVLARTYPPPDKKVR 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   + +    G   ++  +K+G   N   EL   N     + D N   G  E M  
Sbjct: 191 YLGLTFFIVEKDTPGFKVEQCYHKMGLYGNHACELVLENV---EVPDEN-RVGE-EGMGF 245

Query: 315 LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           L  +++        A  +V   + +  +A  Y  +R   G  +     ++ ++ ++   I
Sbjct: 246 LYAMETFDRTRIGVAAQAVGMAQAAFEKAFQYVHQRQAFGVPIAYFQAIQFSLVEMMAKI 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L++  A   DE +           +A + K++  ++A  VI+EA+   GG G I 
Sbjct: 306 FTARLLTYLAAKLADEDRREF------TFVASLAKFYATEVAEEVISEAINLHGGVGVIR 359

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E  + R  R      I  G+ N   L
Sbjct: 360 ETGVERFLRSVKITQIYEGANNIQKL 385


>gi|322508306|gb|ADX03760.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517932|gb|ADX92313.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 427

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 220 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 272

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 273 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 329

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  ARI+       C
Sbjct: 330 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 382

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 383 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 421


>gi|313672308|ref|YP_004050419.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939064|gb|ADR18256.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 379

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 35/298 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P+      IG + LTE   G+D+A I +  ++  D  + L+G+K F+++
Sbjct: 101 FGNEDQKKKYLPLLAKGEKIGCILLTEPEAGSDVANIQTTYKREGD-YFILNGNKIFITN 159

Query: 238 PMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  ++ A  +  +    +   + D    G+   + + K+G R + T  + F+N   
Sbjct: 160 GGFKGIGVVFASFDRSLKHKGLSAFIIDLESEGVEILKNEEKMGIRGSYTTAIGFNNV-- 217

Query: 297 FLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRR 342
                      PVE++  K       A+ +++G R+ +A             A+ Y++ R
Sbjct: 218 ---------KIPVENLLGKEGDGFKIAMETLNGGRIGIAAQALGIAEGAFERALAYSKER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  +AD+   I  A  ++++ A   +  K+ + E+A       I K 
Sbjct: 269 KQFGKPISENQAIQFKLADMIAKIETAKLITYKAAWLKNMKKTNAMESA-------ICKM 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++A  V  EA++  GG GYI E  + R YR++    I  G+     + +  +L K
Sbjct: 322 YASEVATYVTKEAVQIFGGYGYICEYEVERMYRDAKITEIYEGTNEVQRIVISKMLLK 379


>gi|296818839|ref|XP_002849756.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS
           113480]
 gi|238840209|gb|EEQ29871.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS
           113480]
          Length = 542

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D++ ++ + +   DG  Y ++G K W  +  MSD F    +  G  G 
Sbjct: 266 ICLAITEPGAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GEPGM 324

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
             V  LL + S  G+  +++  + G  S+ T  + F +     G L+G  N     +   
Sbjct: 325 GGVSVLLIERSMGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 383

Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              E M I+I        +   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 384 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 437

Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416
            A    SF  L N   + +   E+ A  R+   I         T  +C + A  +     
Sbjct: 438 EA----SFNWLENLVFQCQHMDEDTAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLS 493

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      + R YR+  A +I  GS   M+
Sbjct: 494 YSRGGQG----GKVERLYRDVRAYAIPGGSEEIML 524


>gi|167588029|ref|ZP_02380417.1| AMP-dependent synthetase and ligase [Burkholderia ubonensis Bu]
          Length = 1279

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 22/282 (7%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255
              +TE   G+ + AITS+ Q+I  G + ++G K W  SS  +   + F   A   G VG 
Sbjct: 739  FAITEPAAGSHLRAITSRAQRIDTGDWLVTGTKSWSGSSAWAGIINVFAKQADGAGMVGL 798

Query: 256  FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313
             + P     G+P   +  + L   +      ++ L+ +  +  + LGD+       +   
Sbjct: 799  AVRP-----GTPGVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMPVAQHAM 853

Query: 314  ILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A +S+  M+   A+ +H Y  RR +  G+L+D P+ +  + ++   I    A 
Sbjct: 854  NIARLAIAAVSLGAMK-RCAQLMHRYGARRRIGTGLLLDNPLSRLRLGELRHRIDGLNAF 912

Query: 373  SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               LA   D   +  E+         I+K    ++      E M+ +GG GYIE     +
Sbjct: 913  VEHLAAELDLGVAVPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAPQ 966

Query: 433  HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
             +R++    I  G    + LD L   LL  G +L   L + L
Sbjct: 967  IFRDARLTRIFEGPTETL-LDHLGSRLLNGGDDLLRYLENAL 1007


>gi|328873098|gb|EGG21465.1| isovaleryl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 848

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +   ++ DG + ++G+K W  + P +D  ++ A+ +   G   +
Sbjct: 589 LAMSEPNAGSDVVSMKTHATRV-DGGWKINGNKMWITNGPDADVLVVYAKTDPAGGSKGI 647

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F + F   + D NV       +++L+  
Sbjct: 648 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVMGTVGSGVRVLMSG 704

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +S      M+  + + + Y   R   G  + +  +M+  +AD+   + A+ + 
Sbjct: 705 LDYERLVLSAGPLGIMQSCMDQVVPYIHTREQFGKKIGEFQLMQGKVADMYTLLNASRSY 764

Query: 373 SFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + +A + D    SR + AA           +  + A  +  +A++ +GG+GYI E    
Sbjct: 765 VYTVARAADAGLVSRKDCAAVI--------LYSAENATQLALQAIQTLGGNGYINEFPTG 816

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 817 RLLRDAKLYEIGAGT 831


>gi|121712200|ref|XP_001273715.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119401867|gb|EAW12289.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 457

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 36/268 (13%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +H G++C    +  EP   K            MAQL    L  P  +  +  A    P +
Sbjct: 103 LHTGIYCDEVGQVPEPECTKAD----------MAQLGRSGLAGPGASLNAGFAFGIPPIL 152

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
              +  +       P      ++  +AI    TE   G+D+A IT+   K  DG  Y ++
Sbjct: 153 --KYGSEELQERVLPELLTGKKRACIAI----TEPEAGSDVANITTTATKSPDGKYYIIN 206

Query: 230 G-HKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           G  KW  +   SD   M  +  G     +   LVP     G P G+  +RLK   G  + 
Sbjct: 207 GTKKWITNGIWSDYTTMAVRTGGPGAAGLSVILVPL---KGHP-GVTMRRLKVS-GQLTG 261

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHY 338
            T  +E  +     +G+L    G  E M+I++       L  A+      RV+LA A+ Y
Sbjct: 262 GTTYIELDDV-QVPVGNLIGREG--EGMRIIMTNFNHERLTIAVGVTRQARVALASAVQY 318

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDI 366
             +R   G  L+DQPV++  +A    ++
Sbjct: 319 TMKREAFGKTLMDQPVVRHRLAKAGAEL 346


>gi|303325028|pdb|3MPI|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325029|pdb|3MPI|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325030|pdb|3MPI|C Chain C, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325031|pdb|3MPI|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325032|pdb|3MPJ|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325033|pdb|3MPJ|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325034|pdb|3MPJ|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325035|pdb|3MPJ|E Chain E, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325036|pdb|3MPJ|F Chain F, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325037|pdb|3MPJ|G Chain G, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
          Length = 397

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K + PK+ S E+               G G+TE   G+D+ A++S  +   D  + L+
Sbjct: 109 LKKKYVPKLSSAEF-------------LGGFGITEPDAGSDVMAMSSTAEDKGDH-WLLN 154

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           G K W  ++  +D  I  A  +   G   L   ++E  +  G+    L+ K+G+ ++ T 
Sbjct: 155 GSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSHASPTG 213

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341
           EL   N     +   N+   P +  +I+   L+   +S +   V LA+A     I Y   
Sbjct: 214 ELFLDNV---KVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNE 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + D  + +  IA +A+++ AA  L+++ A + DE +  +       +   + K
Sbjct: 271 RRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNN------GLDVAMAK 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           Y   +        AM  +G  GY  E  +AR YR++P   ++ GS N
Sbjct: 325 YAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSAN 371


>gi|294877938|ref|XP_002768202.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239870399|gb|EER00920.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 432

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 24/268 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH-KWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE + G+D+A+I +  +  +DG  Y ++G  KW  +   SD F    +  G  G 
Sbjct: 156 ISLAITEPQTGSDVASIRATAKLSADGKHYIVNGEKKWITNGIFSDYFTTAVRT-GPEGM 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL    P G+  +++  + G  S+ T  +EF++       +LG  N      E  
Sbjct: 215 NGISVLLIPKGP-GVTVRQMDCQ-GVWSSGTTFVEFNDVKVPVENMLGKEN------EGF 266

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++Y          + +V   R+    +  YA++R   G  LI+ P+++  +A++A  I
Sbjct: 267 KVIMYNFNHERWGFVVQAVRFSRLLYEVSFKYAQKRKTFGKTLIEHPLIRWKLAEMARQI 326

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A A    L +       +         +A + K  C KM      EA +  GG+ Y  
Sbjct: 327 EGAHAWMESLTHQLCTMPPKQAVLMLGGPLA-LCKAHCTKMFEYCAREASQIFGGNAYTR 385

Query: 427 E---RSIARHYRESPANSILLGSGNAMV 451
                 + R YR+  A +I  GS   M+
Sbjct: 386 SGLGEVVERLYRDVRALAIPGGSEEIML 413


>gi|121611102|ref|YP_998909.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555742|gb|ABM59891.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 27/298 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP + +  + ++  R   PT           + LG++E   G+D+A++ +  +K  D 
Sbjct: 92  MATPALARFGSDELRERFLKPTVAG-----DYVVCLGVSEAGAGSDVASVKTTARKDGDD 146

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN-GLCYQRLKNK 278
            Y ++G K W  +   +D   +LA   G    R    +   L E+G    G+   ++K K
Sbjct: 147 -YVINGSKMWITNGLQADWMCLLANTGGEDPHRNKSLICLPLRENGKLRPGITMNKIK-K 204

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
           +G  S+ T ++ F +      + +G+     G +  MK      L  A   V+ +   + 
Sbjct: 205 VGMWSSDTAQVFFDDVRVPQRYRIGE--EGKGFIYQMKQFQEERLSGATRRVTALMNVVH 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E I Y R+R   G  ++D  V+   +A++  +I    +L +R A         +E A+ A
Sbjct: 263 ETIDYTRQRKAFGQSILDNQVVHFRMAELKTEIELLRSLIYRAAQVHMADGDMTELASMA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ A        ++   V    ++  GG G+  + S++R +R+    SI  G+   M+
Sbjct: 323 KLKAG-------RLCREVTDSCLQYWGGMGFTWDNSVSRAWRDLRLISIGGGADEIML 373


>gi|300692750|ref|YP_003753745.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           PSI07]
 gi|299079810|emb|CBJ52487.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
          Length = 393

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 28/288 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              IG L ++E   G+D+ ++  + ++  D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAERRGDH- 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++  + E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338
            T EL F N       +LG+ N  T  +  M  L Y + A++S   +  M+  +     Y
Sbjct: 214 HTGELVFDNVEVPAENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  IAD+   + A  A  + +  + D A  R       +  A 
Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  Y   + A  +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|239983347|ref|ZP_04705871.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455171|ref|ZP_06594561.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358120|gb|EFE85022.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 401

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 73/294 (24%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D++AI+++G K+ D  Y L+G K +L++  S   + +        C       ++G P
Sbjct: 135 GSDVSAISTKGVKVGD-EYALTGQKMWLTNGGSSTLVAVL-------C-----RTDEGHP 181

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G           ++S  T  +E    FG +   L +  G +E M     +D+  M + G
Sbjct: 182 EGTAP--------HKSMTTFLVEKEPGFGEVRPGLTIP-GKIEKMG-YKGVDTTEMILDG 231

Query: 328 MRV--------------------------------------SLAEAIHYARRRHVSGGIL 349
           +R+                                      +    + YA++RH  G  +
Sbjct: 232 LRIPANRVLGGTTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPI 291

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +A++A  + AA A+    A   D  +    EA  A+ +A  ++Y  CK A 
Sbjct: 292 AQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMAKYLA--SEY--CKEA- 346

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
             + +A    GG G+ +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 347 --VEDAFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|254250507|ref|ZP_04943826.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124879641|gb|EAY66997.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 614

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   IY + G K ++S+ M +      +
Sbjct: 148 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 207

Query: 244 IMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS 292
            +L +++        + C +VPR   D       PN +    L  K+G +  A   L F 
Sbjct: 208 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFG 267

Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342
           +   T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 268 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 322

Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
                      H +   +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 323 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 382

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 383 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 442

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 443 SIWEGTNYIQAQDLV 457


>gi|118443327|ref|YP_878397.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium novyi NT]
 gi|118133783|gb|ABK60827.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium novyi NT]
          Length = 379

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD +   +   K  D  Y L+G K F++ SP+++ F++ A  +   G   +
Sbjct: 123 FGLTEPNAGTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
              + +    G+   ++++K+G R     E+        +L D  V   P E++      
Sbjct: 182 SAFIVEKDFPGISIGKVEDKMGIRGAQVGEI--------ILEDCVV---PAENLLGKEGK 230

Query: 313 ---KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  LD   + V+   + LAE     A  Y + R   G  L     +   +AD+ +
Sbjct: 231 GFAIAMKTLDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDV 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  +  L +  A   +     S  AA A++        C   A  V  EA++  GG GY
Sbjct: 291 RIEQSRYLLYTAAMDKNNGNPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           I++  + R  R++    I  G+
Sbjct: 344 IKDYPVERMMRDAKITQIYEGT 365


>gi|71279950|ref|YP_271311.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71145690|gb|AAZ26163.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 394

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 52/333 (15%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           DG  CS  +     +V ++  ++ +     M+ +++  +M P      + A  TT +  K
Sbjct: 70  DGYGCSGVNYVSYGLVAREVERVDSGYRSAMS-VQSSLVMHP------INAYGTTEQKEK 122

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            + PK+ + EY              IG  GLTE   G+D +++ ++ +K+ DG Y L+G 
Sbjct: 123 -YLPKLATGEY--------------IGCFGLTEPGSGSDPSSMITRAKKV-DGGYRLTGS 166

Query: 232 K-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           K W  +SP++D F++ A  + EG   C  V   LE G   GL   +++ KI  R++ T E
Sbjct: 167 KMWITNSPIADVFVVWAKNEAEGNQICGFV---LEKGMA-GLSAPKIEGKISLRTSITGE 222

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +   N F     +  ++    GP   + +  Y       +S   +  AE   +  R++  
Sbjct: 223 IVMDNVFVPEENMFPEIRGLAGPFGCLNMARY------GISWGALGAAEFCWHGARQYGL 276

Query: 346 GGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             I   +P     + +  +A++  +I+     S R+    D  K       +   M  + 
Sbjct: 277 DRIQFKRPLAQTQLFQTKLANMQTEISLGLQASLRVGRIIDTKK-------WDPTMISMV 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           K   C  +  +   A +  GG+G  +E  + RH
Sbjct: 330 KRNNCGKSLDIARMARDMHGGNGISDEFHVIRH 362


>gi|26990765|ref|NP_746190.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985765|gb|AAN69654.1|AE016600_4 isovaleryl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 424

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 165 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 224 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRV------- 276

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   +
Sbjct: 277 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 334

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI 
Sbjct: 335 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 387

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 388 EFPAGRLLRDAKLYEIGAGT 407


>gi|186685963|ref|YP_001869159.1| acyl-CoA dehydrogenase type 2 [Nostoc punctiforme PCC 73102]
 gi|186468415|gb|ACC84216.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain protein [Nostoc
           punctiforme PCC 73102]
          Length = 399

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 125/308 (40%), Gaps = 45/308 (14%)

Query: 172 KDWAPKIFSR--EYDPTNKAPMQKTSVAIGLGLTEKRGG--TDIAAITSQGQKISDGIYC 227
           + W P+++ R         A +    V   LG T  RGG    IA  T++G +       
Sbjct: 111 RRWHPEVYKRLCRESIEGIALINAARVEPELG-TPARGGLPATIAEHTTEGWR------- 162

Query: 228 LSGHKWFLS-SPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           L+GHK + + SP+   F++ A+    E +VG FLVPR L      GL      + +G R+
Sbjct: 163 LTGHKQYTTGSPILSYFVVWARTTEDEPQVGNFLVPRDLP-----GLQIVETWDHLGMRA 217

Query: 284 NATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA----- 335
             + +L   N    L   LN   +S  P  D  I  +     ++VS + + +A +     
Sbjct: 218 TGSHDLILENVLIPLEYALNLSPISAAPSLDPLISTW---GSLTVSALYLGVATSARDWL 274

Query: 336 IHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + Y   R  S     L   P  + A+ +I + + A   L + LA   D    R E     
Sbjct: 275 VKYLWERSPSNLKEPLATLPRFQTAVGEIEVLLFANNRLIYSLAEDID----RGEYDPNV 330

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE-------SPANSILLGS 446
            + A   KY     +   +  A+E  G  G ++   + RHYR+       +P N ++  S
Sbjct: 331 GLQAQAVKYLTTTNSIRAVEIALELTGNPGMLKRNPLERHYRDVLCSRIHTPQNDVICQS 390

Query: 447 GNAMVLDV 454
                L V
Sbjct: 391 LGKSALKV 398


>gi|126641422|ref|YP_001084406.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 338

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 61  QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 105

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 106 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 165

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G    +K+L+     + A++S      M   L   I Y  +R 
Sbjct: 166 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 222

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 223 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 282

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 283 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 321


>gi|88855166|ref|ZP_01129831.1| FadE19 [marine actinobacterium PHSC20C1]
 gi|88815694|gb|EAR25551.1| FadE19 [marine actinobacterium PHSC20C1]
          Length = 395

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 50/299 (16%)

Query: 178 IFSREYDPTNK--APMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           IF +  D   +   PM     A+ G GLTE   G+D AA T    ++ DG + ++G K F
Sbjct: 108 IFKQGTDAQKQEWVPMLARGEALAGFGLTEADAGSD-AAGTKTTAELVDGEWVINGTKQF 166

Query: 235 LSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           +++  S+    + +  V GR       +   LVP    +G+P G       +K+G  ++ 
Sbjct: 167 ITNSGSEITKVVTVTAVTGRRENGKPELSAILVP----NGTP-GFTVHPAYDKVGWHTSD 221

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIH 337
           T  L F N       LLG+             +  LD   ++ S +     +  L E+I 
Sbjct: 222 THPLSFDNVRVPEANLLGERGRGFA-----NFIETLDEGRVAFSALCTGAAQGCLEESIR 276

Query: 338 YARRRHVSGGILIDQPVMKRAIAD---IALDIA--AATALSFRLANSFDEAKSRSEEAAY 392
           YA  RHV G          R+I     IA  IA   A   S RLA ++D A+       +
Sbjct: 277 YANERHVFG----------RSIGSNQHIAFKIARMQARVHSARLA-TYDAARKLVAGVPF 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            ++ A + K    + A     +A +  GG G++ E  +ARHYR+S    + LG G   V
Sbjct: 326 -KMEASLAKMISSEAAMDNARDATQIFGGYGFMNENPVARHYRDSKV--LELGEGTTEV 381


>gi|84515514|ref|ZP_01002876.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84510797|gb|EAQ07252.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 407

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K + G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTTAKKTAGG-YVLNGSKMWISNAPIADVFVVWAKSEAHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++     D    GL   ++  K+  R++ T E+   N     +G+  +  G V+ +K  
Sbjct: 208 FVL-----DKGMKGLSAPKVGGKLSLRASVTGEIVMDNV---EVGEDALLPG-VQGLKGP 258

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   ++   +  AEA  +A R     R   G  L    + ++ +AD+  +IA  
Sbjct: 259 FGCLNRARYGIAWGVMGAAEACWHAARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIALG 318

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T  + +L    +  ++  E       M  + K   C  A  +   + +  GG+G  E+  
Sbjct: 319 TQAALQLGRLMETGRAAPE-------MISLMKRNNCGKALDIARASRDMHGGNGISEDFQ 371

Query: 430 IARH 433
           I RH
Sbjct: 372 IMRH 375


>gi|284029421|ref|YP_003379352.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808714|gb|ADB30553.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 387

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 23/270 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D A++ ++   ++DG  Y L+G K W  ++ +SD + + A  +       + 
Sbjct: 129 LSEPEAGSDAASMKTRA--VADGSQYVLNGVKRWITNAGVSDYYTVFAVTDPSARSKGIS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + + S  G+ +   + K+G + + T E+ F N       ++G+     G       + 
Sbjct: 187 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEPGTGFGTA-----MA 241

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   ++++   + +A+     A+ Y + R   G  + +   ++  +AD+ + I AA  
Sbjct: 242 TLDHTRVTIAAQALGIAQGALDYALGYVKERKQFGKPIAEFQGLQFMLADMGMKIEAARQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A     A+S   E       A   K +   +A AV  +A++ +GG GY  +  + 
Sbjct: 302 LTYAAA-----ARSERNEPDLTYFGA-AAKCFASDVAMAVTTDAVQLLGGYGYTHDYPVE 355

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           R  R++    I  G+     + +   L KG
Sbjct: 356 RMMRDAKITQIYEGTNQVQRIVMARQLLKG 385


>gi|218659484|ref|ZP_03515414.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli IE4771]
          Length = 282

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 30/263 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + ++ ++  D  Y L G K F++S  +   I++  V     G+ G
Sbjct: 27  GFALTEPQAGSDASNLKTRARRDGDH-YVLDGAKQFITSGKNGNIIIVFAVTDPDAGKKG 85

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G    R++ K+G  S  T ++ F+          G       ++
Sbjct: 86  ITAFIVPT-----ETPGYEVIRVEEKLGLHSTDTCQIAFNAMRIPVDLRLGAEGEGYRIA 140

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YA+ R   G  + +   +   +AD+A+ 
Sbjct: 141 LANLEGGRIGI----AAQAVGMARAAFEAARDYAKERMAFGKPIFEHQAVAFRLADMAVR 196

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L F  A   +       EA+ A++ A        +MA  V ++A++  GG GY+
Sbjct: 197 IEAARQLVFHAAALREAELPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 249

Query: 426 EERSIARHYRESPANSILLGSGN 448
            +  + R YR+     I  G+ +
Sbjct: 250 ADYPVERIYRDVRICQIYEGTSD 272


>gi|297190904|ref|ZP_06908302.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722698|gb|EDY66606.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 401

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+G K  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAITSKGVKDGD-EYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313
           L +  P       GL      +K+G +   T EL      G  +    V  G       +
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGTTGRGFYQ 250

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A  + A
Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKQIAQHQAIQFKLAEMATKVEA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E 
Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|124268544|ref|YP_001022548.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124261319|gb|ABM96313.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 410

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  +   +D  ++ A+ E   G   V
Sbjct: 148 LAMSEPNAGSDVVSMKLRAERRGD-RYVLNGAKMWITNGGDADTMVVYAKTEPEAGAKGV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             L+ +    GL +    +K+G R + T  + F +    +   L    G V+ +   +  
Sbjct: 207 TALIVEKGFKGLSFGSKLDKLGMRGSNTYPVFFEDCEVPVDNVLGQEGGGVKVLMSGLDY 266

Query: 319 DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           + A++S   + +  A     + Y   R   G  + +  +M+  +AD+    +A  A  + 
Sbjct: 267 ERAVLSAGPLGIMAACMDLVLPYVHDRKQFGQSIGEFQLMQGKLADMYTTFSACRAYVYA 326

Query: 376 LANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  + D A   +S  ++AA A + A     W       +  EA++ +GG+GYI E    R
Sbjct: 327 VGQACDRADHSRSLRKDAAGAILYAAEKATW-------MAGEAIQVLGGNGYINEYPAGR 379

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 380 LWRDAKLYEIGAGT 393


>gi|118590969|ref|ZP_01548369.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118436491|gb|EAV43132.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 386

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249
           L +TE   G+D+  +  Q  +   G + +SG K F+S +  +D FI+             
Sbjct: 122 LAMTEPDAGSDVRGMKCQAVR-DGGDWVISGSKHFISGAEHADFFIVFVATGVDETPKGP 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---ST 306
           + R+ CFLV R    G+P G   +     + +R      L F    G  L D  V     
Sbjct: 181 KKRITCFLVDR----GTP-GFEVREGYRSVSHRGYKNCILYFD---GCRLPDSQVLGEVD 232

Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  E M   +Y   L  A MSV   R     A++YA  R   G  +     +   +AD+ 
Sbjct: 233 GGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQAIARFQGVSFQVADMI 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L+   A   D+    + E A A++ A        +M   V    ++  GG G
Sbjct: 293 TEIDAADWLTLAGAWRLDQGLPANREIASAKVYA-------SEMLARVTDTTLQIFGGMG 345

Query: 424 YIEERSIARHYRESPANSILLGS 446
            +++  I R +R++    I  G+
Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368


>gi|300711634|ref|YP_003737448.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
 gi|299125317|gb|ADJ15656.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
          Length = 380

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 27/273 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     G  LTE   G+D + + ++ +K  D  Y L+G K F+++      I++  V
Sbjct: 113 PLAEGEYVGGWALTEPGSGSDASDMNTRAEKDGDE-YVLNGTKQFITNASEAGSILVKAV 171

Query: 250 EG------RVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
                    +  F+V PR  ED   +G     +  K+G  ++ T E++  +       LL
Sbjct: 172 TDPEAGYDGISTFIVDPR--ED---DGFEVTTIWEKMGLNASPTCEIQLDDVRLPEDRLL 226

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RA 358
           G+  V  G  +  K L   D   +S++ + V LA+  + A R++ +      QP+ K  A
Sbjct: 227 GE--VGDGWNQTKKTL---DGGRISIAALSVGLAQGAYEAARKYSTEREQFGQPISKFDA 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + +  + +   T  +  L +       R EE      +A +     C+    V  +A++ 
Sbjct: 282 VRNTVVAMHRKTERARLLTHDAATTYDRGEEVTRKSALAKLDASEACR---EVAEDAVQV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +GG GY E+ +  R YR+  A  + +G G + +
Sbjct: 339 LGGYGYTEDFAPQRFYRD--AKLMEIGEGTSEI 369


>gi|226954212|ref|ZP_03824676.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC
           27244]
 gi|226835044|gb|EEH67427.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC
           27244]
          Length = 382

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 31/303 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S  +A  +  + T    + W PK+ S E              A+G +G+TE   G+D+ A
Sbjct: 92  SEIAAPYIQHIGTEEQKQYWLPKMVSGE--------------AVGAIGMTEPGAGSDLQA 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D   +G   
Sbjct: 138 MRTSA-ILQDDHYLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDTHLDGFKK 196

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--G 327
               +KIG  S  T EL F N       LLG  N  +G    M+ L    +AI S +   
Sbjct: 197 GTNLDKIGLHSQDTSELFFDNVKVPKDQLLG--NAGSGFAYLMQELPRERTAIASTALGA 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R S+  A  Y + R   G  +      +  +A   +D  A  A   +    + + K   
Sbjct: 255 IRGSIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVELYMQGKLDV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E AA         K +   M   V    ++  GG GY+ E  I+R + ++    I  G+ 
Sbjct: 315 ETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTN 367

Query: 448 NAM 450
             M
Sbjct: 368 EIM 370


>gi|167578692|ref|ZP_02371566.1| AMP-binding domain protein [Burkholderia thailandensis TXDOH]
          Length = 642

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 16/270 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+++ AI S  Q++    + +SG K W  SS  +    + A+     G  +V  
Sbjct: 108 LTEPAAGSNVRAIASVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 165

Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
            +  G+P GL        +G R     T+ L+ +  +    LG         +       
Sbjct: 166 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 224

Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ I D+   I   +AL  +L
Sbjct: 225 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 283

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 284 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQIFRD 337

Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465
           +    I  G    ++  + + LL  G +L 
Sbjct: 338 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 367


>gi|308478355|ref|XP_003101389.1| hypothetical protein CRE_13526 [Caenorhabditis remanei]
 gi|308263290|gb|EFP07243.1| hypothetical protein CRE_13526 [Caenorhabditis remanei]
          Length = 418

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E + G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 158 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLV    E  +P G       +K+G R + T EL F N     + +  +  G  + + 
Sbjct: 217 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 268

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +SG     M+ +   A  YA +R   G  +    +++  +AD+   + 
Sbjct: 269 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 328

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ +  + +A + D+    +++ A   +       +  +    V  +A++ +GG+GYI +
Sbjct: 329 ASRSYLYMVAKAADKGTVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 381

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               R  R++    I  G+     L +   L K
Sbjct: 382 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 414


>gi|184157988|ref|YP_001846327.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332874447|ref|ZP_08442350.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209582|gb|ACC56980.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332737291|gb|EGJ68215.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 430

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  ARI+       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|170735003|ref|YP_001774117.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821041|gb|ACA95622.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 617

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   IY + G K ++S+ M +      +
Sbjct: 149 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 208

Query: 244 IMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS 292
            +L +++        + C +VPR   D       PN +    L  K+G +  A   L F 
Sbjct: 209 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFG 268

Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342
           +   T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 269 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 323

Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
                      H +   +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 324 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 383

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 384 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 443

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 444 SIWEGTNYIQAQDLV 458


>gi|90417367|ref|ZP_01225292.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
 gi|90330809|gb|EAS46078.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
          Length = 388

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++     K  D  Y L+G+K W  + P +  +I+ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLSATKQGDH-YLLNGNKMWITNGPDAHTYIIYAKTDTSAGSKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   N+  G    + +L+  
Sbjct: 189 TAFIVERDFPGFSRHQKLDKLGMRGSNTCELVFQDC---AVPAENILGGEGCGVAVLMSG 245

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG  V + +A     + Y   R   G  + +  +M+  IAD+  D+ A+ A 
Sbjct: 246 LDYERTVLSGGPVGIMQACLDVVLPYIHERSQFGQAIGEFQLMQGKIADMYADLNASRAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D A+   ++AA A I+      +  + A  +  + ++ +GG+GY  E    R
Sbjct: 306 LYAVARACDLAQDSRKDAA-AVIL------FTAEKATQMALQTIQALGGNGYTNEYPAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + V  +L     G  LF Q
Sbjct: 359 LLRDAKLYEI--GAGTSEVRRML----IGRELFNQ 387


>gi|328882615|emb|CCA55854.1| Isovaleryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 386

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 50/315 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    ++W P++ + E             +    GLTE   G+D     +   +  D
Sbjct: 102 LFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVRDGD 148

Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274
             + ++G K F+++  +D    + +  V GR       +   +VP     G+P G     
Sbjct: 149 -EWVINGSKCFITNSGTDITGLVTVTAVTGRKPDGRPLISSIIVP----SGTP-GFTVAA 202

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +K+G  ++ T EL F +       LLG+           + L  LD   ++++ +   
Sbjct: 203 PYSKVGWNASDTRELSFDDVRVPVANLLGEEGRGYA-----QFLRILDEGRVAIAALATG 257

Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA     E++ YA+ RH  G  + D   ++  IAD+ +  A    + +R      +A SR
Sbjct: 258 LAQGCVDESVKYAKERHAFGRPIGDNQAIQFKIADMEMR-AHMARIGWR------DAASR 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  +  A I K +   +A     EA +  GG G++ E  +AR +R+S    + +G 
Sbjct: 311 LVRGDTFKKEAAIAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILEIGE 368

Query: 447 GNAMVLDVLNLLEKG 461
           G + V  +L   E G
Sbjct: 369 GTSEVQRMLIARELG 383


>gi|306845026|ref|ZP_07477607.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306274658|gb|EFM56447.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
          Length = 592

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D+A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDDADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|126278376|ref|XP_001381068.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Monodelphis domestica]
          Length = 422

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 26/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VEGRVGC 255
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  I+ A+   V   V  
Sbjct: 161 LAMSEPSAGSDVVSMRLKAEKKGD-YYILNGTKFWITNGPDADVLIVYAKTDPVAVPVSR 219

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            +   ++E   P     ++L +K+G R + T EL F N       +LG L+         
Sbjct: 220 GITAFIVEKNMPGFSTCKKL-DKLGMRGSNTCELVFENCKVPVSNILGHLSKGV-----Y 273

Query: 313 KILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  LD   + ++G     M+  L   I Y   R   G  +    +M+  +AD+   + 
Sbjct: 274 VLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLT 333

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +    + +A + DE     ++ A   + A        + A  V  + ++C+GG+GYI +
Sbjct: 334 TSRQYVYNVAKACDEGHHSPKDCAGVILYA-------AESATQVALDGIQCLGGNGYIND 386

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R++    I  G+
Sbjct: 387 FPMGRFLRDAKLYEIGAGT 405


>gi|308452033|ref|XP_003088892.1| CRE-IVD-1 protein [Caenorhabditis remanei]
 gi|308244474|gb|EFO88426.1| CRE-IVD-1 protein [Caenorhabditis remanei]
          Length = 418

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E + G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 158 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLV    E  +P G       +K+G R + T EL F N     + +  +  G  + + 
Sbjct: 217 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 268

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +SG     M+ +   A  YA +R   G  +    +++  +AD+   + 
Sbjct: 269 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 328

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ +  + +A + D+    +++ A   +       +  +    V  +A++ +GG+GYI +
Sbjct: 329 ASRSYLYMVAKAADKGTVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 381

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               R  R++    I  G+     L +   L K
Sbjct: 382 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 414


>gi|312199535|ref|YP_004019596.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230871|gb|ADP83726.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 403

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 52/323 (16%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +M  S+ +A + +  T  ++  +WAP+ +    DP   A            ++E   G+D
Sbjct: 88  IMGSSLAAAGISSAGTLEQL-VEWAPQCYGDASDPKLGA----------FCVSEPGAGSD 136

Query: 211 IAAITSQGQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLL 262
           ++++ ++ +  + +D  + L+G K W  +  +++  +++A V+  +       F++P   
Sbjct: 137 VSSLRTRARYDEATD-EWVLNGQKAWITNGGIANIHVVVASVDPELKSRGQATFVIP--- 192

Query: 263 EDGSPN--GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV---------STGP 308
               PN  GL   +   K+G R++ T +L F +       LLG  +            G 
Sbjct: 193 ----PNTPGLVAAKKIKKLGLRASHTADLFFDDVRVPGSCLLGGKDKLDARLAKAREGGH 248

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +   +    +V    V +A A     + YA+ R   G  +I+   +  A+AD+ 
Sbjct: 249 SRGQGAMATFERTRPTVGAQAVGIARAAYEYALDYAKTRETFGRPIIENQAIAFALADMK 308

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L +R A    + K+      +      ++K    ++A AV  +A++ +GG+G
Sbjct: 309 TEIDAARLLIWRAAWMGKQDKT------FLAGEGSMSKLKAGEVAVAVTEKAVQILGGAG 362

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R YR+S   +I  G+
Sbjct: 363 YSREHPVERMYRDSKIYTIFEGT 385


>gi|126698383|ref|YP_001087280.1| putative acyl-CoA dehydrogenase [Clostridium difficile 630]
 gi|255099918|ref|ZP_05328895.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-63q42]
 gi|255305807|ref|ZP_05349979.1| putative acyl-CoA dehydrogenase [Clostridium difficile ATCC 43255]
 gi|115249820|emb|CAJ67637.1| putative acyl-CoA dehydrogenase [Clostridium difficile]
          Length = 380

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 33/294 (11%)

Query: 170 VHKDWAPKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-GI 225
           +H  +A  I  F  E       PM      +G   LTE   G+D A   +      +   
Sbjct: 89  IHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTAIIDEETDE 148

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+S    +++ I+ A  +   G   +  ++ D    G    +++ K+G   +
Sbjct: 149 YVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGS 208

Query: 285 ATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334
            T EL F       SN  G      N++         +  LD A + V    V +AE   
Sbjct: 209 ETAELIFDNCRVPKSNLLGKEGKGFNIA---------MTCLDGARIGVGAQAVGIAEGAL 259

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+     +  ++EAA 
Sbjct: 260 EESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A       KY   + A  V   A++  GG GY+++  + R YR++    I  G+
Sbjct: 320 A-------KYNASRTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITEIYEGT 366


>gi|209963716|ref|YP_002296631.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209957182|gb|ACI97818.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 383

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVE---GRVGC 255
           + +TE   G+D+  + +   ++    Y L+G K F+++  + +  I++A+ +   G  G 
Sbjct: 127 IAMTEPGTGSDLQGVRTSA-RLDGNQYVLNGSKTFITNGQTANLIIVVAKTDPAAGAKGT 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  ++E  + +G    R  +KIG +   T EL F +       LLG      G V+ M
Sbjct: 186 SLI--VVETDAVDGFRRGRNLDKIGLKGQDTSELFFDDVRVPTSSLLGP-QPGLGFVQLM 242

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L    L  A+ +++G+   +A  + Y ++R   G  +ID    +  +A    ++    
Sbjct: 243 QQLPQERLIIALEALAGIEAGIAATLDYVKQRKAFGQRIIDFQNTRFTLAQAVTEM---- 298

Query: 371 ALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               R+A +F D+   R  +       A + K W  +   A++ + ++  GG GY+ E  
Sbjct: 299 ----RVARAFCDDCTERHLKGELDAATAAMAKLWLTERQCAILDDCLQLHGGYGYMNEYP 354

Query: 430 IARHYRESPANSILLGSGNAM 450
           IAR + ++    I  G+   M
Sbjct: 355 IARLWADARVGKIYGGTNEIM 375


>gi|254461839|ref|ZP_05075255.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacterales bacterium
           HTCC2083]
 gi|206678428|gb|EDZ42915.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 379

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 30/275 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255
           G  LTE + G+D + + +   +  D  + ++G K F++S  +   I++  V  +  C   
Sbjct: 120 GFALTEPQAGSDASNLKTSAVRDGDE-WVINGAKQFITSGKNGQMIIIFAVTDKDACKRG 178

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305
              F+VP      +P G    R+++K+G     T +L F+       N  G       ++
Sbjct: 179 ISAFIVPT----NTP-GYEVVRVEDKLGLNCTDTCQLAFTDMRVPAENMLGEEGQGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I   +  M+ S ++V    A  YA  R   G  + +   +   +AD+A  
Sbjct: 234 LANLEGGRIGIAAQAVGMARSALKV----ARDYATERTSFGTAIANHQAVGFRLADMATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  +    A+  + +     EA+ A++ A        ++A  V ++A++ +GG GY+
Sbjct: 290 VEAARQMVLHAASLKEASIPCLNEASMAKLFAS-------EVAEKVCSDAIQTLGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  + R YR+     I  G+ +   L +   L++
Sbjct: 343 SDYPVERIYRDVRICQIYEGTSDIQRLVIARNLDQ 377


>gi|126348648|emb|CAJ90373.1| putative acyl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
           23877]
          Length = 390

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+D A++ ++  +  D  + ++G K W     ++D + ++A+   EG  G   F
Sbjct: 133 LSEPASGSDAASLRTRAVRAGDD-WVITGTKAWITHGGVADFYTVMARTGEEGPRGITAF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP   E     GL     + K+G + + T ++      G  + D        +   I L
Sbjct: 192 LVPADAE-----GLSAAVPEKKMGLKGSPTAQIHLD---GVRVSDARRLGDEGQGFAIAL 243

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LDS  + ++   + +A     EA+ YA  R   G  + D   ++  +AD+A  I A  
Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVSYAVERRQFGKPIADFQGLRFMLADMATQIEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     +++AA A       K  C   A  V  +A++ +GG GY  +   
Sbjct: 304 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTDAVQVLGGYGYTADFPA 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYMREAKVLQIVEGT 372


>gi|108763787|ref|YP_629060.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622]
 gi|108467667|gb|ABF92852.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622]
          Length = 602

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 95/428 (22%), Positives = 163/428 (38%), Gaps = 59/428 (13%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           + +  AR   Y T +     P   R  +V  HP    L  R +  GL  +    +  P V
Sbjct: 49  STRRFAREVLYPTYRDMDAQPPSFRDGRVHVHPLMRELYPRLVELGLLTA----TRPPDV 104

Query: 129 RKQ-----AHKIRAARLYLMA-QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
             Q      H +  A  YLMA  L     +  ++ +A ++ +  TP V   +   ++  E
Sbjct: 105 GGQQLPLTVHAVSTA--YLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRGE 162

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
           +  T             + LTE + G+ +A + ++     DG + + G K F+S    D 
Sbjct: 163 WTGT-------------MALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDF 209

Query: 242 ----AFIMLAQVEGRVG------CFLVP-RLLEDGS--PNGLCYQRLKNKIGNRSNATVE 288
                 + LA++EG  G       F VP R  E G+   N +    + +KIG +   ++ 
Sbjct: 210 NENVVHLTLARIEGAEGGTRGISLFAVPSRRPEGGTLVDNDVRVAGVIHKIGWKGIPSLA 269

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           L +  +    G+L+G        +  M     +   +  V+   V+  EA+ YAR R   
Sbjct: 270 LNYGESGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAVAYARERPQG 329

Query: 343 ---HVSGGILIDQPVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
               V        P++           ++AI +  L +  A +    LA    +  +R  
Sbjct: 330 RPTGVRDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQR 389

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K +  +      A A++  GG GY  E       R+   NSI  G+  
Sbjct: 390 AGLLVDLLTPVAKSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTG 449

Query: 449 AMVLDVLN 456
              LD+L 
Sbjct: 450 IQGLDLLG 457


>gi|56459982|ref|YP_155263.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56178992|gb|AAV81714.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 389

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P ++ F++ A+ E       +
Sbjct: 130 LAMSEPNAGSDVVSMKLRAEKKGDK-YILNGNKMWITNGPEANVFVIYAKTEPEKNSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN      E +K+L
Sbjct: 189 TAFIVEKDTPGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGELN------EGVKVL 242

Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +     + A+++      M+  L   + Y   R   G  + +  +++  +AD+     AA
Sbjct: 243 MSGLDYERAVLAAGPLGIMQACLDTCVPYIHDRKQFGKEIGEFQLIQGKVADMYTRTNAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E  
Sbjct: 303 RAYVYAVAQSCDRGETTRKDAAGAIL-------YAAELATQLALDAIQLLGGNGYINEYP 355

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 356 TGRLLRDAKLYEIGAGT 372


>gi|323137065|ref|ZP_08072145.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397826|gb|EFY00348.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 389

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + ++  D  Y L G K W  + P +D  I+  + +   G   +
Sbjct: 130 LAMSEPGAGSDVTNMRLRARRSGD-EYILDGSKMWVTNGPDADIIIVYGKTDPSAGAHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + + +  G+      +K+G R + T EL F      ++   NV   P   + +L+  
Sbjct: 189 TAFIVERAFKGVSASPKFDKLGMRGSNTCELIFDEC---VVPAENVLGRPERGVNVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     ++G     MR  L   + Y   R   G  + +  +M+  +AD+   ++A+ A 
Sbjct: 246 LDYERAILAGGPLGIMRACLDIVLPYVHERKQFGQPIGEFEIMQGKLADMYTALSASRAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A + A     W       +  EA++C+GG+GY  E    R
Sbjct: 306 IYAVAKACDRGRTTRKDAAAAILFAAEKATW-------MALEAIQCLGGNGYTNEYPTGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LF++
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFQE 387


>gi|218781156|ref|YP_002432474.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762540|gb|ACL05006.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 384

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 117/263 (44%), Gaps = 38/263 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFL 257
            TE   G+DI  + +    + DG  + ++G K F+++  ++  F  L Q +   +     
Sbjct: 125 FTEPGHGSDITGMDTTA--VLDGDEWVINGTKIFITNGNLAGFFCTLCQTDPDAKPAYRG 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           +  +L +    G+    + +K+G R   T E+ F         D+ V   P E++     
Sbjct: 183 LSMILVEADREGVSTTSVGDKLGIRMMDTAEVVFK--------DVRV---PKENLIGVEG 231

Query: 313 ----KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
               ++L + D + + ++   +  A+     A+ Y ++R   G  L    + +  +AD+A
Sbjct: 232 KGFYQVLEFFDESRILIAAQALGTAQGALDRAVEYVKQREQFGKKLAQFQITQHKLADMA 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             +  A  ++++ A ++D+ K   +       +  + K +  + A  V  EA++ +GG G
Sbjct: 292 TKVELARLMTYKAAWNYDQGKIDPK-------LTSMAKMFAARTAVEVADEAIQLLGGYG 344

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+ E  + R YR++    I  G+
Sbjct: 345 YMREYDVERFYRDAKITEIYEGT 367


>gi|187920336|ref|YP_001889367.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718774|gb|ACD19997.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 377

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+++   +D  I+ A  +   G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGSRADLAIVFAVTDPDRGKRGLTA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   V +A A       YA  R   G  L +   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQAVGIARAAFDAARLYANERIQFGKALKEHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      K    EA+ A++ A        ++A  + + A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRTAGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|148657081|ref|YP_001277286.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569191|gb|ABQ91336.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 364

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 28/298 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +LM+P++ +  ++   T  +  + W P+     + P   A            L E R   
Sbjct: 89  YLMTPNLFAIPILHFGTEEQKER-WLPRTVEGGFAPYTAA------------LIEPRWSF 135

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A+ +  ++  + +Y ++GHK  +  +  + AF++ A+       F++ R  E     
Sbjct: 136 DPHALHTVAEREGN-VYEITGHKALVPLAADAQAFLVYARENDTTQAFIIERGTE----- 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSG 327
           GL     ++ +G R+  T EL   +        L    G  +E +     +  A ++V  
Sbjct: 190 GLAVLERESFMGIRALPTYELRLDDVHVPASCRLGGEQGIDIEALMNYSRVALAALAVGV 249

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A  YA++R   G  +     +   +A++A++I AA  +++  A   D+  + +
Sbjct: 250 ARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEIEAARLMTYEAAWHLDKGHNAT 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + A+ A       K +  +MA  V   A++ +GG GYI E  + R  R     S  LG
Sbjct: 310 QSASLA-------KAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFLG 360


>gi|107028398|ref|YP_625493.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116686394|ref|YP_839641.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105897562|gb|ABF80520.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116652109|gb|ABK12748.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 617

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   IY + G K ++S+ M +      +
Sbjct: 149 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 208

Query: 244 IMLAQVEG------RVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFS 292
            +L +++        + C +VPR   D       PN +    L  K+G +  A   L F 
Sbjct: 209 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELQPNHVDCIGLPRKMGLKGCANTHLVFG 268

Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342
           +   T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 269 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 323

Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
                      H +   +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 324 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 383

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 384 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 443

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 444 SIWEGTNYIQAQDLV 458


>gi|324997655|ref|ZP_08118767.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 383

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 35/272 (12%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------Q 248
           ++ +G+ +TE   G+D+A++++   +  D  Y ++G K F+++ ++   +++A      Q
Sbjct: 121 TLILGIAMTEPGIGSDLASMSTTAVREGDQ-YVVNGSKTFITNGINADLMVVAVKTDPSQ 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303
               +   ++ R +E     G    R  +K+G  +  T EL F++       LLG     
Sbjct: 180 KHKGMSLLVLERGME-----GFERGRNLDKLGQHAQDTAELSFTDVRVPVENLLGPDEGQ 234

Query: 304 -----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                V+  P E + I      A+  V+  R +L + + Y + R   G  +      K  
Sbjct: 235 GFTQLVTNLPQERLSI------AVAGVAAARTALTQTLEYVKERKAFGSPIGSFQNSKFV 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  +I  A         + +  +  + +A+ A       KYWC ++   V+ + ++ 
Sbjct: 289 LAELDTEIDIAEHYVDDCVRALNAGELTAVDASKA-------KYWCTELQGRVVDKCLQL 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  I++ Y ++    I  G+   M
Sbjct: 342 HGGYGYMSEYPISKAYADARITRIYGGTTEIM 373


>gi|296140232|ref|YP_003647475.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028366|gb|ADG79136.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 382

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 111/296 (37%), Gaps = 40/296 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    + W PK+ S E              A+G + +TE   G+D+  + ++  K + G 
Sbjct: 107 TEEQKQAWLPKMASGE--------------AVGAIAMTEPGTGSDLQNVKTRAIK-TGGE 151

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F+++   +D  +++ +     G   +  +L +    G     + NKIG +  
Sbjct: 152 YVINGSKTFITNGQQADIVVLVCKTNPDEGAAGISLILVEADREGFRKGNILNKIGQKGQ 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334
            T EL F +    +   L    G          P E + I          VSGM V   E
Sbjct: 212 DTSELFFDDVHVPVENLLGTQEGQGFYQLMQQLPQERLII------GQACVSGMEVIFEE 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y + R   G  +      K  +A+   +   A           D+   +  +     
Sbjct: 266 TLRYTKEREAFGRPIFGFQNTKFKLAEALTETTIARVF-------VDDCIEKHVKGELDI 318

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               + K+W    A  V +E ++  GG GY+ E   AR + ++    I  G+   M
Sbjct: 319 PTVAMAKWWTSDRAQEVASECLQLFGGYGYMAEYPAARFWVDNRVQMIYAGTNEIM 374


>gi|269217380|ref|ZP_06161234.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129517|gb|EEZ60602.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 398

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 31/266 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-- 247
            Q  SV I   LTE+ GGT  A I +   K +DG Y L+G KW +S +  SD   ++A  
Sbjct: 117 FQDKSVYINFALTEQTGGTG-ADIHTTAIKQADGTYLLNGEKWLISHTDCSDYTYVIAVT 175

Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
               + + R+  F+VP    + +P G     + + +G R      L+F+N      +LLG
Sbjct: 176 DESKEKDDRLSAFVVP----NDAP-GFEIVPMSHMMGCRGAGHAGLKFTNVKLDPKYLLG 230

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                + ++   +   ++ I   +  M+   + +SL      A  R   G  +  + ++K
Sbjct: 231 VEGQGMEIAIHSLSVSRVHIACSNLGMAQRMLEISLKR----ANDRVTFGKPIATRQMIK 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IA++   I       +  A  +D   +      Y    A I K +       V  E +
Sbjct: 287 QKIAEMQKMIHVLRTAIYDFARDYDINPTNE----YVTEKAAICKLFSIDTVKLVSDEML 342

Query: 417 ECIGGSGYIEERSIA---RHYRESPA 439
           E  GG GY E+       R YR+  A
Sbjct: 343 EIFGGDGYFEDSPYGPTERLYRDCRA 368


>gi|260554057|ref|ZP_05826320.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260404796|gb|EEW98303.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 385

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  +I A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEIEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        ++   V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|39934684|ref|NP_946960.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39648534|emb|CAE27055.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 390

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++  K  D  + L+G+K W  + P+++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKTRADKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELLFEDCEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   V  M+  +   + Y   R   G  +    +++  +AD+ + + A+ A
Sbjct: 250 ERAVL----AAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|313214052|emb|CBY42609.1| unnamed protein product [Oikopleura dioica]
          Length = 286

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 126/283 (44%), Gaps = 35/283 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253
           LG++E   G+D+A I +  +   D  Y ++G K W  +   +D   +LA   +G V    
Sbjct: 22  LGVSEVHAGSDVAQIKTTAKSDGDD-YIINGQKMWITNGIQADWCCLLANTSDGPVHKSK 80

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
               VP  L      G+   +   KIG  S+ T +L F +      +++G+    +G + 
Sbjct: 81  SLICVPMDLP-----GVIRAKKIEKIGMWSSDTAQLWFEDVRVPKKYIIGE--EGSGFIY 133

Query: 311 DM-----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            M     + +  + SAI   SG+   + E I+Y R R   G  ++D   +   +A++  +
Sbjct: 134 QMIQFQQERIFAMASAI---SGLENCINETINYTRERQAFGKSVLDNQYIHFQLAELQTE 190

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL +R+   +   +  ++ A+  ++          ++   V  + ++  GG GY 
Sbjct: 191 VELLRALLYRVTAMYVNGEDATKLASMGKLKTG-------RLIREVADKCLQMWGGMGYT 243

Query: 426 EERSIARHYRESPANSILLGSGNAM---VLDVLNLLEKGTNLF 465
            E  +++ +R+    S+  G+   M   +  ++++L KGT L 
Sbjct: 244 LENPVSQQFRDGRLASVGGGADEIMLQIICKLMDILPKGTKLI 286


>gi|307324572|ref|ZP_07603779.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306889816|gb|EFN20795.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 385

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251
           + +TE   G+D+A + +  +   DG  Y L+G K F++   ++D  ++ A+       + 
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  +   L+ D    G    R   K+G +++ T EL F+        D+ V   PVED
Sbjct: 184 RSGISI---LVVDTKSEGYAVGRKLEKLGLKTSDTAELSFT--------DVKV---PVED 229

Query: 312 M-----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     K   YL   +          + +    ++  A  Y R R V G  +      K 
Sbjct: 230 LLGEEGKAFGYLTHNLPQERLGIAVGAYAQAAAAVRFATEYVRDRTVFGQAVASFQNTKF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD   ++ A  A+  R  ++ D  +  + +AA A++       +  + A  VI + ++
Sbjct: 290 VLADCQSEVDAMQAVVDRALDAHDADELTAADAASAKL-------FTTERAAVVIDKCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 343 LHGGYGYMMEYPIARLYADTRVNRIYGGTSEVM 375


>gi|313675289|ref|YP_004053285.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312941987|gb|ADR21177.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 395

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ + +T+  +   D  Y L+G K W  +SP  D  ++ A+  EGR+   +
Sbjct: 139 FGLTEPDHGSNPSGMTTNFKDKGDH-YLLNGAKMWISNSPKCDVAVVWAKNEEGRIHGLI 197

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G        K   R++ T EL F N        L   +G    MK L  
Sbjct: 198 VERGME-----GFTTPETHGKWSLRASTTGELVFDNVKVPKENLLEGKSGLGAPMKCL-- 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372
            DSA   ++   +  A   + + RR+    I   +P+      ++ ++++  +I  +  L
Sbjct: 251 -DSARFGIAWGAIGAAMDCYDSARRYSLERIQFGKPIASFQLTQKKLSEMLTEITKSQLL 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RLA   DE K+ + + + A+  A        ++A  +  EA +  GG G   +  + R
Sbjct: 310 NYRLAQLMDEGKASTPQISMAKRNA-------VEIALNIAREARQIHGGMGITGDYPMMR 362

Query: 433 H 433
           H
Sbjct: 363 H 363


>gi|156741097|ref|YP_001431226.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156232425|gb|ABU57208.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 388

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR- 260
           LTE   G+D A I +   +  D      G  W  +   +D  ++ A  +  +G    PR 
Sbjct: 125 LTEPNAGSDAAHIRTTAVRDGDSWVLNGGKMWITNGSFADVIVVFANTDPSLG----PRG 180

Query: 261 ----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
               ++E G P G    +++ K+G R++ T  + F +       +LG+  V  G    ++
Sbjct: 181 ITAFIVEKGFP-GFKVGKVEPKMGLRASHTASIFFEDCRVPAANVLGE--VGRGYALALQ 237

Query: 314 IL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            L      L +A +  +     L  ++ YA  R   G  + D   ++  +AD+A+ I   
Sbjct: 238 TLDIGRCGLGAACLGAAKEAYEL--SLKYAVERQQFGRPIADFQAIQFKLADMAVKIYTM 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +  A   D  ++       AR+ + I K +C      ++ EA++  GG G+  E  
Sbjct: 296 EQIVYDCAKKVDRGET-------ARLESSIVKLYCTDALAWILDEAIQIHGGMGFSRELP 348

Query: 430 IARHYRESPANSILLGS 446
           + R YR++    I  G+
Sbjct: 349 LERMYRDARVFRIYEGT 365


>gi|319764366|ref|YP_004128303.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118927|gb|ADV01416.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 399

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 24/257 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P       IG   L+E   G+D+AA++ + +   DG Y L+G K W  +  ++D + + A
Sbjct: 128 PAVARGTKIGAFALSEPDAGSDVAALSCRAEADGDG-YVLNGSKTWISNGGLADFYCVFA 186

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVST 306
           + +   G   +   + D    GL      + I     A++  E        +LG      
Sbjct: 187 RTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLASLHFENCRVPRSCMLGP----- 241

Query: 307 GPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K+      +     A  ++   R ++ E + +A RR + G  L D  + + A  
Sbjct: 242 -PDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQTLADFQLTQAAFG 300

Query: 361 DIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D+A  I  +  L++R A   D + ++ + E A A++ A        + A  VI  A++  
Sbjct: 301 DMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TESAQQVIDRALQMF 353

Query: 420 GGSGYIEERSIARHYRE 436
           GG G      + R YR+
Sbjct: 354 GGKGVTVGNPLERLYRD 370


>gi|289640901|ref|ZP_06473071.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289509216|gb|EFD30145.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 378

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 25/273 (9%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           +Y P   A   K SV+I    TE   G+D AA+ ++    +D  + L+G+K F S   + 
Sbjct: 109 QYLPGFLAGRTKFSVSI----TEPGAGSDAAAVQTRAVLDNDH-WVLNGNKVFCSGAHLP 163

Query: 241 DAFI-MLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
           D  I +LA+   E   G  L+  L+ + +P G+  ++L N I  RS  T E+ F++    
Sbjct: 164 DTVITVLARTSPERHRGLSLI--LVPNTAP-GVDIRKL-NTIVRRSLGTTEIFFTDVHVP 219

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G L+G++N   G + +      L  A   V   R +L + + Y R R   G  L    V
Sbjct: 220 AGNLIGEVNNGWGYIGEHLEYERLSLAASYVGNARTALDDTVTYTRNRTQFGRPLSSFQV 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +K  +A+   ++ AA  L +  A      +   +E + A++ A         +A      
Sbjct: 280 LKHRMAENECEVEAARLLVYNAATKMARGERALKEVSMAKVFA-------ADVAFRTSFN 332

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            M+ +GG   + E  + R++RE  A   ++G G
Sbjct: 333 GMQALGGYAQLPEFDMERYFRE--AKHAMVGGG 363


>gi|254509713|ref|ZP_05121780.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533424|gb|EEE36412.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 387

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 32/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L +    G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKEMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGRGVAVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEVMPYLAERKQFGKPIGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQALGGAGFLS 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  ++R +R+  A  + +G+G + +  +L
Sbjct: 351 DAPVSRIFRD--AKLMEIGAGTSEIRRML 377


>gi|324998480|ref|ZP_08119592.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 382

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 26/300 (8%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +H+       S E       P         + +TE   G+D+A + ++  +  D 
Sbjct: 94  MATPSLHR-----FGSEELKQRYLVPAIAGEAVCSIAVTEPDAGSDVAGLRTRADRDGDD 148

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K ++++ + +D   +LA+     G     +++      G    R  +K+G R 
Sbjct: 149 -WVINGSKLYITNGVQADWICLLARTSDEPGARGFSQIVVPSGLPGYAVSRKLDKLGMRC 207

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T EL F+       NT G +           ++ +    + +A   V G+  +L    
Sbjct: 208 SDTAELTFTDLRVPVANTIGEIGRGFQQQMTQFQNER----MSAAYDRVGGLEQALDRTR 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  LID   +   +A++   +      ++  A    EA  R E+ +     
Sbjct: 264 DYLKTRRAFGHPLIDNQYLAFQLAELYARLDMVRHYNYACA----EAHVRGEDTSQ---F 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K    +++  V    ++  GG GY+EE   AR  R+    SI  G  + ++L VL 
Sbjct: 317 ATVAKLAVGRLSRDVAQTCLQYHGGMGYMEETWTARFLRDMTLTSI-GGGADEVMLQVLT 375


>gi|317125991|ref|YP_004100103.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590079|gb|ADU49376.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 382

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256
           L+E   G+DIA++T++     DG Y L G K W   +  +D +   A+    G  G   F
Sbjct: 127 LSEPLAGSDIASMTTRATPTGDGSYSLKGTKAWISHAGHADYYTTFARTADTGSKGLSTF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP          L +   + K+G   +   ++ F      + G   +       M  L 
Sbjct: 187 VVPADAAG-----LAFAAPERKMGLHGDPVAQVMFDGVV--VDGARRIGEEGQGMMMALS 239

Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++       + +L +A  YA  RH  G  +     +   +AD+   + +A A
Sbjct: 240 ALDSGRLGIAAGATGLAQAALDQAATYANERHQFGRPIASNQGLAFLLADMEAAVTSARA 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                A   D  +  S+EAA A+++A          A  V  +A++ +GG+GY E+  + 
Sbjct: 300 TYLHAARLKDAGRPFSKEAAVAKLVA-------TDAAMKVTTDAVQVLGGAGYTEDFPLE 352

Query: 432 RHYRESPANSILLGS 446
           R+ RE+    I  G+
Sbjct: 353 RYLREAKVTQIFEGT 367


>gi|221200448|ref|ZP_03573490.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221206128|ref|ZP_03579142.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221174140|gb|EEE06573.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221179789|gb|EEE12194.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 411

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 159 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP         G    + + K+G R++ T  +   N       LLG+    L ++   
Sbjct: 218 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 272

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  L +   +++ +AD+A+ I A
Sbjct: 273 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 328

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A       K +  +MA  V ++A++  GG GY+ + 
Sbjct: 329 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 381

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 382 EVERHYRDARITQIYEGT 399


>gi|225387070|ref|ZP_03756834.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme
           DSM 15981]
 gi|225046814|gb|EEG57060.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme
           DSM 15981]
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 42/307 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225
           TP   K + P             P+      I   LTE   G+D     ++   + DG  
Sbjct: 110 TPEQKKKYIP-------------PLASGEKKIVFALTEPGAGSDAGGTLTRA--VKDGEY 154

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y LSG K F+S +P++D  ++ A+    + G   +   + D    G+   + + K+G   
Sbjct: 155 YILSGRKCFISGAPLADYAVIYAKTNPALKGSKGISMFIVDMKLPGVSLGKPELKMGING 214

Query: 284 NATVELEFSNTF---GFLLG--DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----- 333
             T ++   N       LLG  D   ST        L  LD   + V+   + +A     
Sbjct: 215 YPTSDIILENVRVHESDLLGPPDKGFSTA-------LKTLDGGRLGVAAQSLGIAQCCLE 267

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E+I YA+ R   G  +     +   IAD+A +I AA  + +  A + D  +        A
Sbjct: 268 ESIRYAKERRQFGRPIAKFQAISFMIADMATEIEAAREMIYSTALAKDAGEKD------A 321

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            +   + K +  +MA  V  +A++  GG GY+ +  + R YR++   +I  G+     + 
Sbjct: 322 PMKCSMCKLFASEMANRVAYKAVQIHGGYGYMRDYKVERMYRDARITTIYEGTSQVQQMV 381

Query: 454 VL-NLLE 459
           +  NLL+
Sbjct: 382 IAGNLLK 388


>gi|209546464|ref|YP_002278382.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537708|gb|ACI57642.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 375

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 30/263 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + ++ ++  D  Y + G K F++S  +   I++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGDH-YVIDGAKQFITSGKNGNVIIVFAVTDPDAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVS 305
              F+VP         G    R++ K+G  S  T ++ F+         LG       ++
Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSTDTCQIAFNAMRIPVALRLGAEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YA+ R   G  + +   +   +AD+A+ 
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYAKERTAFGKPIFEHQAVAFRLADMAVR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L F  A   +      +EA+ A++ A        +MA  V ++A++  GG GY+
Sbjct: 290 IEAARQLVFHAAALREAELPCLQEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 342

Query: 426 EERSIARHYRESPANSILLGSGN 448
            +  + R YR+     I  G+ +
Sbjct: 343 ADYPVERIYRDVRICQIYEGTSD 365


>gi|146343861|ref|YP_001208909.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196667|emb|CAL80694.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 398

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 41/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           L+EK  G+D+AA+    ++  D  Y L G K W  +  ++D + + A+     G      
Sbjct: 137 LSEKEAGSDVAAMACSARRDGDD-YVLDGEKTWISNGGIADVYTLFARTGEAPGARGISA 195

Query: 256 ---------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                    F V   +E  +P+ L   RL+N           +  S   G   G   ++ 
Sbjct: 196 FVVYPDDSGFSVAERIEVIAPHPLATLRLEN---------CRIPVSRRLGAPGGGFKLA- 245

Query: 307 GPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                M+ L I+  S   +  G  R +L EA  +A+ R + GG L D  + + A  ++A 
Sbjct: 246 -----MQTLDIFRASVAAAALGFGRRALDEAQAHAQSRQMFGGALADLQMTQAAFGEMAT 300

Query: 365 DIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           D  AA  L++R A   D  K   + EAA A++ A  T       A  VI  A++  GG G
Sbjct: 301 DTDAAALLTYRAAWRRDVQKLPTTREAAMAKLTATET-------AQRVIDRALQMFGGRG 353

Query: 424 YIEERSIARHYRESPANSILLGS 446
             +   +   YRE  A  I  G+
Sbjct: 354 VRKGEIVEGLYREIRALRIYEGA 376


>gi|84516103|ref|ZP_01003463.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509799|gb|EAQ06256.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 402

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D +A+ +  +K + G Y +SG K W  +SP++D F++ A+ E   G++  
Sbjct: 144 FGLTEPDAGSDPSAMKTTAKKTATG-YMISGAKMWISNSPIADVFVVWAKSEAHGGKIRG 202

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL ++    GP    
Sbjct: 203 FVLEKGMK-----GLSAPKVGGKLSLRASITGEIVMDGVEVGEDALLPNVEGLKGP---- 253

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE  +H AR+    R   G  L    + +  +A++  +I+
Sbjct: 254 --FGCLNRARYGISWGVLGAAEFCMHAARQYGLDRKQFGKPLAQTQLQQVKLANMLTEIS 311

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA++  E       M  I K   C  A  +   + +  GG+G  EE
Sbjct: 312 LGLQASLRVGRLLDEAQAAPE-------MISIIKRNNCGKALDIARMSRDMHGGNGISEE 364

Query: 428 RSIARH 433
             I RH
Sbjct: 365 YQIMRH 370


>gi|262203693|ref|YP_003274901.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087040|gb|ACY23008.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 386

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 20/263 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   F++ A   G  G   V 
Sbjct: 128 LAITEPDGGSDVGHLRTSAVRDGDH-YVVNGAKTYITSAVRADFVVTAVRTGGPGAGGVS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+ D    G    R   K+G RS+ T EL F +       L+G  N     +    +  
Sbjct: 187 LLVIDKDTPGFTVTRRLEKMGWRSSDTAELSFVDARVPVTNLVGAQNSGFAQIAAAFVTE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAA--TAL 372
               A+ + +  +  L   + + R R   G  LI +  ++ ++ ++A  +DIA     A+
Sbjct: 247 RSGLAVQAYASAQRCLDLTLAWVRDRQTFGKPLIARQSVQDSLTEMARRIDIARTYTRAV 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R   S D+  +   E  +A+  A  T  W       V  +A++  GG GY+    + R
Sbjct: 307 VERKVTSGDDLIA---EVCFAKNTAVETGEW-------VADKAVQLFGGLGYMTGTEVER 356

Query: 433 HYRESPANSILLGSGNAMVLDVL 455
            YR+     I +G G   +L  L
Sbjct: 357 QYRD--MRIIGIGGGTTEILSGL 377


>gi|255530052|ref|YP_003090424.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255343036|gb|ACU02362.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 379

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  +  +  +   D  Y L+G K W  +   +  ++++AQ +       +  
Sbjct: 125 LSEPEAGSDATSQQTTAEDKGDH-YLLNGTKNWITNGGTASTYLVIAQTDKSLRHKGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS------------NTFGFLLGDLN 303
           F+V + +E     G      +NK+G R + T  L F+            N FGF      
Sbjct: 184 FIVEKGME-----GFTVGPKENKMGIRGSDTHSLMFNDVKVPKENRIGENGFGFKFAMKT 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  G        I + +  + ++     LA  + YA++R   G  + +   +   +AD+A
Sbjct: 239 LEGGR-------IGIAAQALGIAAGAYELA--LDYAKQRKAFGKPIAEHQAIAFKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L ++ A   D+ +  +       +   + K +  K+A  V  EA++  GG G
Sbjct: 290 THIEAARLLVYKAAWLKDQGQPYT-------LAGSMAKLYASKVAMEVTVEAVQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           +++E  + R  R++    I  G+
Sbjct: 343 FVKEYHVERLMRDAKITQIYEGT 365


>gi|254382188|ref|ZP_04997549.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194341094|gb|EDX22060.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 401

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 45/280 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  K  D  Y L+G K +L++  S   + +         EG      +   
Sbjct: 135 GSDVSAITSKAVKDGDE-YVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           L +  P       GL      +K+G +   T EL        ++  L +    V   +  
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPANRVLGGQTG 245

Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +  V   RV++A              + YA++RH  G  + +   ++  +A++A
Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           + +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|156546419|ref|XP_001607123.1| PREDICTED: similar to acyl-coa dehydrogenase [Nasonia vitripennis]
          Length = 423

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 34/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +        
Sbjct: 162 LAMSEPGAGSDVVSMKLKAEKKGD-YYLLNGNKFWITNGPDADTLVVYARTDPNAAKKQH 220

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F++ + +E     G    +  +K+G R + T EL F N       +LG  N     
Sbjct: 221 GITTFIIEKGME-----GFSTAQKLDKLGMRGSNTCELIFENCKVPAANVLGQENKGV-- 273

Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +L  LD   + ++G     M+ +   +  YA+ R   G  + +  +++  IAD+ 
Sbjct: 274 ---YVLLSGLDLERLVLAGGPLGIMQAACDVSFEYAQTRKQFGKNIAEFQLIQGKIADMY 330

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + ++ +  + +A + D      ++ A A I+      +C + A     +A++ +GG+G
Sbjct: 331 TRLCSSRSYLYSVARACDNGHVNGKDCA-AVIL------YCAENATKTALDAIQILGGNG 383

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI + S  R  R++    I  G+
Sbjct: 384 YINDYSTGRLLRDAKLYEIGAGT 406


>gi|167034658|ref|YP_001669889.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166861146|gb|ABY99553.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVQVPAENILGQLNGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|161520205|ref|YP_001583632.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353617|ref|YP_001949244.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344255|gb|ABX17340.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337639|dbj|BAG46708.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 377

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP         G    + + K+G R++ T  +   N       LLG+    L ++   
Sbjct: 184 FLVPT-----DTPGFIIGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  L +   +++ +AD+A+ I A
Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A       K +  +MA  V ++A++  GG GY+ + 
Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|70732407|ref|YP_262163.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68346706|gb|AAY94312.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 378

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGYLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVEADTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +      AI  ++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------AIGGLASAEAALQWTLEYTRERKAFGKAIADFQNSRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA A       KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370


>gi|77460917|ref|YP_350424.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77384920|gb|ABA76433.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 378

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L + +  G    +  +K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVEANTPGFDKGKRLDKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +      AI  ++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------AIGGLASAEAALQWTLDYTRERKAFGKSIADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA A       KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370


>gi|83748604|ref|ZP_00945623.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207743137|ref|YP_002259529.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83724728|gb|EAP71887.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206594534|emb|CAQ61461.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 622

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 129/320 (40%), Gaps = 71/320 (22%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGAKGISLFIVPKFLVNADRSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335
                     +   G+L+G+      P + +  + ++ +      GM  ++        A
Sbjct: 284 RPLGPDGQPRAGAIGYLVGE------PHKGLACMFFMMNEARIGVGMGATMLGYTGYLHA 337

Query: 336 IHYARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + YAR R     +             ++D   ++R +      +  A  L+   A   DE
Sbjct: 338 LDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397

Query: 383 AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  ++ A  AR      I+ PI K W  +      + A++  GG GY  E ++ + YR+
Sbjct: 398 ARGETDPAVRARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRD 457

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +  N I  G+     LD+L 
Sbjct: 458 NRLNPIHEGTHGIHGLDLLG 477


>gi|328781352|ref|XP_395491.4| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 594

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 142/332 (42%), Gaps = 49/332 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   K + P++ + +Y                  LTE   G+D  +I S+  K 
Sbjct: 132 ILLYGTPEQKKKYLPRVCNGDY--------------AAFCLTEPSSGSDAGSIRSRAIKS 177

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G+K W  +  +++   + AQV          + ++  F+V R     S  G
Sbjct: 178 ADGSHYILNGNKIWISNGGLAEIMTVFAQVPVQDLETGKIKDKITAFIVER-----SFGG 232

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG- 327
           +     + K+G + + T E+ F N     +   N+  G  +   + +  L++    ++  
Sbjct: 233 VISGPPEKKMGIKCSNTTEVHFENV---KIPAENIIKGEGQGFSVAMNVLNNGRFGMAAA 289

Query: 328 ----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE- 382
               MR  + +A+ +A +R   G  +     ++  +  +A+      +L++ +A + D  
Sbjct: 290 LSGTMRYCIKKAVEHATQRVQFGHTIDYYGSIQEKLGRMAMLHYVTESLAYSIAGNMDNG 349

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    EAA ++  A    +W C        E ++ +GG  Y+++  + R  R+     I
Sbjct: 350 SQDYYLEAAISKCFASEAAWWVCD-------ETIQILGGMAYMKDTGLERVMRDLRIFRI 402

Query: 443 LLGSGNAM-VLDVLNLLEKGTNLFEQLFSTLE 473
             G+ + + +  VL+ L+      +QL S ++
Sbjct: 403 FEGTNDILRIFIVLSGLQHAGIHLQQLMSAIK 434


>gi|284043053|ref|YP_003393393.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947274|gb|ADB50018.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 396

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257
           +G+TE   G+D+A I ++  +  D  Y ++G K ++++     +I+L    G    G   
Sbjct: 139 IGITEPDAGSDVAGIKTRAVRDGDD-YVINGSKTYITNGHRADYIVLMTKTGDNDSGYDG 197

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
               + D    G+  ++   K+G  ++ T  L F +       +LG+  V  G    M  
Sbjct: 198 FTVFIVDMDLPGVIREKRLEKLGMHASDTALLAFQDVRVPADAVLGE--VGKGFYHIMWE 255

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    L  A   VSG +++  + + YA  R   G  +    V +   A++A  I +A  +
Sbjct: 256 LQGERLIGAAGCVSGAQLAFDKTLEYALERTAFGRQIGKFQVTRHKFAEMATKIESARQM 315

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A  F+  +    E + A++ A        ++A  V  E ++  GG+GY++E  I R
Sbjct: 316 VYTTAWRFNNGEYPVREISMAKLHA-------ARIAVEVADECIQIHGGAGYMKEYGIER 368

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
            +R+   N I  G+ + ++LDV+ 
Sbjct: 369 VWRDMRLNRIGAGT-DEIMLDVIG 391


>gi|320007286|gb|ADW02136.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 31/263 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----R 252
           + + ++E   G+D+AA+    ++  DG + ++GHK W  ++ +++  +++A+ +     R
Sbjct: 128 LSIAMSEPEAGSDVAALRCAAERTPDGGWLVNGHKTWISNAHLAEHILLVARTDASGTKR 187

Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G   F VP     G+P G+  + ++   G   N   ++ F+     L  D  V      
Sbjct: 188 EGLTMFHVP----AGTP-GIRIRPIETMGGREVN---DVYFTEV--RLPADAVVGVADHA 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +++  LD+  + ++   + LAE      + Y R R   G  +     ++  +AD+A +
Sbjct: 238 WPQLMAGLDAERLFLAANMLGLAERVLEDTVAYVRGREQFGRPVGSFQALRHRLADLATE 297

Query: 366 IAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           I  A  L F +A + D    R  S EA+ A++ A  T       A     E M+ +GG G
Sbjct: 298 IECARLLVFDVAAACDAEPGRRFSREASMAKLKATET-------ARNAALEGMQMMGGYG 350

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + RH R +  +++  G+
Sbjct: 351 YATEYDMERHLRAAVVSTVYGGT 373


>gi|119370276|gb|ABL68070.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
          Length = 352

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251
             LTE   GTD  A  +Q + + DG  + L+G K F+++  ++D +I++A         G
Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R        +++ G+P G  +   + K+G R ++T EL F +     +   N+     + 
Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236

Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             I ++ LD   + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  
Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAAR 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L ++ A +    K  S EAA A++ A  T       A AV  E ++  GG+G+ 
Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGNGFT 349

Query: 426 EE 427
           ++
Sbjct: 350 KD 351


>gi|57529797|ref|NP_001006511.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus
           gallus]
 gi|53133742|emb|CAG32200.1| hypothetical protein RCJMB04_19o8 [Gallus gallus]
          Length = 431

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 38/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC 255
           + +TE   G+D+  + +  +K  DG  + L+G K F+++  M D  I++     E R   
Sbjct: 171 IAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKTFITNGWMCDVVIVVTVTNREARSPA 228

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGD 301
             +   L +    G    R  NKIG ++  T EL F +               F +L+ +
Sbjct: 229 HGISLFLVENGTKGFNKGRKLNKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAE 288

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L     P E    L+  D A+ S   M     E   Y R+R   G  +     ++  +A+
Sbjct: 289 L-----PQER---LVIADLALASCEFM---FEETRDYVRQRKAFGKTVAHLQTVQHKLAE 337

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I    A         D       E       A + KYW   +  +V  + ++  GG
Sbjct: 338 MKTNICVGRAF-------LDNCLQLHSEKRLDSPTASMAKYWASDLQNSVATQCVQLHGG 390

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
           SGY+ E  IA+ + ++    I  G+   M
Sbjct: 391 SGYMWEYPIAKAFVDARVQPIYGGTNEIM 419


>gi|325123534|gb|ADY83057.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 385

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        ++   V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|300784385|ref|YP_003764676.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793899|gb|ADJ44274.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 383

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 28/285 (9%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           ++W PK+ S E             +   + +TE   G+D+  I ++  +  D  Y L+G 
Sbjct: 113 REWLPKLASGE-------------MVGAIAMTEPGTGSDLQGIKTRAVRDGDH-YVLNGA 158

Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++ + +D  ++  + +   G   V  ++ +    G    R+ +K+G +   T EL 
Sbjct: 159 KTFITNGLHADLVVVACKTDPDAGAQGVSLIVVETDTPGFRRGRVLDKVGLKGQDTAELF 218

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F +     G LLGD     G ++ M  L    L  A+ +V+G+  ++   + Y + R   
Sbjct: 219 FDDVRVPAGNLLGDAE-GQGFIQLMLQLPQERLIIAVTAVAGLEAAVDLTLEYTKERTAF 277

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G     +P+   +  +    +A A   +       D+   R  +       A + K W  
Sbjct: 278 G-----RPIF--SFQNTKFKLAEAATEAAVARAFLDQCIERHLKGELDVQGAAMAKLWTT 330

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +    VI + ++  GG GY+ E  IAR + +   + I  G+   M
Sbjct: 331 ERVNKVIDDCVQLFGGYGYMTEYPIARAWADVRISRIFGGTSEIM 375


>gi|15805946|ref|NP_294646.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6458645|gb|AAF10499.1|AE001945_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 381

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256
           G  +TE   G+D   I ++  K  D +Y L+G K ++S +P++    ++A  +   G   
Sbjct: 122 GFAITEPSSGSDAGNIRTKAVKKGD-VYVLNGTKHYISNAPIAGLLTVIAITDPAQGSRG 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   L+E  S  G+   ++  K+G +   + E+ F +       LLG  N   G  E + 
Sbjct: 181 MSAFLVEPQSTPGVSIGKIDEKMGQKGALSAEVIFEDAEIPAANLLGPEN--RGYREALG 238

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           IL    +  A  S   M+  L  ++ +A+ R   G  + +   ++  +A++ + I  +  
Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAQTREQFGKPIAEFQAVQFMLAEMEVAIQTSRV 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  ++A   D+ +         + MA + KY   +M   V  +A++  GG GY+++    
Sbjct: 299 LWQKVAWMVDQGQD-------VKRMASVAKYHATEMLSQVADKAVQVAGGMGYVKDAPFE 351

Query: 432 RHYRE 436
           R YR+
Sbjct: 352 RFYRD 356


>gi|327480530|gb|AEA83840.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 383

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 31/264 (11%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251
           AIG   LTE + G++   + ++ +++ D  + L+G K F S+       ++  V     G
Sbjct: 120 AIGCFALTEPQAGSEAHNLRTRAERV-DSQWVLNGSKQFCSNAKRAKLAIVFAVTDPDLG 178

Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302
           + G   FLVP      +P G   +R ++K+G R++ T  +  S       N  G     L
Sbjct: 179 KKGLSAFLVP----TDTP-GFAVERSEHKMGIRASDTCAVSLSDCRIPQANLLGERGKGL 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   +E  +I I       ++   R +   A+ YAR R   G  + +   +   +AD+
Sbjct: 234 AIALSNLEGGRIGI----GAQALGIARAAFEAALLYARERVQFGKPIAEHQSIANMLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L    A           EA+ A++ A        +MA  V ++A++  GG 
Sbjct: 290 QTQLNAARLLILHAARLKSAGLPCLSEASQAKLFA-------SEMAEKVCSQAVQIHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+E+  + R+YR++    I  GS
Sbjct: 343 GYLEDYPVERYYRDARITQIYEGS 366


>gi|301062233|ref|ZP_07202910.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300443665|gb|EFK07753.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 383

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 37/274 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL---SSPMSDAFIMLAQV----E 250
           G GLTE   G+D  A  S+   + DG  + ++G K F+   S+ ++     L +     +
Sbjct: 122 GFGLTEPDAGSD--ASNSKTTAVLDGDQWVINGSKIFITNASTKLTSGVTSLCRTGTRED 179

Query: 251 GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           GR  + C LV    E G+P G   + +  K+  R++ T EL F +     + D N+  GP
Sbjct: 180 GRPELSCILV----EAGTP-GFEAREMHGKLMWRASNTSELYFDDC---RVPDENM-LGP 230

Query: 309 VED--MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             +   +++  LD   +S+  M +  A+     A+ Y+R R   G  + +  V    +AD
Sbjct: 231 RGNGFHQMMQTLDGGRLSIGAMGLGGAQGCYDLALKYSRERTQFGKPISNFQVNAFKLAD 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL+I  A  + ++     D+ K   +EAA A++      Y C          A++  GG
Sbjct: 291 MALEIECARLILYKACWLRDQQKPFGKEAAMAKLHCSEVMYRCAN-------HAVQLHGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G ++E  + R YR+     + +G G + V  ++
Sbjct: 344 YGLMKEYDVERFYRDQKL--LEIGEGTSEVQRIV 375


>gi|160896613|ref|YP_001562195.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160362197|gb|ABX33810.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 389

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 130/269 (48%), Gaps = 22/269 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFL 257
           L LTE   G++ + I +  ++  D  Y L+G K F++ +P++D F ++A+  EG  G   
Sbjct: 128 LALTEPDAGSEASNIQTTARREGDH-YVLNGSKRFITNAPLADVFTVIARTGEGSTGSEG 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
           +     + SP GL   +   K+G   +   ++ F +       ++G      G    MK+
Sbjct: 187 LTAFFVERSP-GLVTGQPYRKMGQAGSPVSDVHFQDCRVPADQIIGGRE-GQGFKTVMKV 244

Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L    ++L +A+ +   +R+ L  A+ + R+R   G  + +  +++  +AD   +I AA 
Sbjct: 245 LNKQRLHL-AALCTGPAIRM-LDLALAHVRQREQFGQPVANFQLVQAMLADSRTEIFAAQ 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS- 429
           ++    A     A+ R E+ A   + A + KY+  +M   V   A++  GG+GY+ + S 
Sbjct: 303 SMILEAAR----ARDRGEDVA---LSASMCKYFASEMCGRVADRAVQMFGGAGYVADFSP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I R++R+     +  G+     L++  L+
Sbjct: 356 IERYFRDVRLFRLYEGTSQIHQLNIAKLM 384


>gi|56476513|ref|YP_158102.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312556|emb|CAI07201.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 384

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 32/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252
             LTE   G+D A++ +  ++  D  Y L+G K +++ +P +  F ++A+          
Sbjct: 122 FALTEPDSGSDAASLRTSARRDGD-CYVLNGTKRYITNAPEAGIFTVMARTTPDSHGAHG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V    E G+P GL    +  K+G +     ++ F +       L+G      G  
Sbjct: 181 ISAFIV----EQGTP-GLSLGPIDRKMGQKGAHICDVIFDDCRVPAANLIGGRE-EVGFK 234

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK+L   D   ++++ + V +AE     A+ YA  R   G  + +  +++  +AD   
Sbjct: 235 TAMKVL---DKGRINIAAVCVGVAERMLDDALRYALERKQFGKPIAEFQLIQAMLADSKA 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA ++    A   D+      EAA A++ A        +M   V   A++  GG+GY
Sbjct: 292 EIYAARSMVLDAARRRDDGLDVGTEAACAKLFA-------SEMCGRVADRAVQIFGGAGY 344

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E  I R YR+     I  G+
Sbjct: 345 LAEYGIERFYRDVRLFRIFEGT 366


>gi|229489108|ref|ZP_04382974.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324612|gb|EEN90367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 383

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 142/360 (39%), Gaps = 46/360 (12%)

Query: 121 DRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVAL----MTTPRVHKDW 174
           DR  +P V++  H       ++  M Q+    L  P     S V++      T  + + W
Sbjct: 20  DREVKPTVQEVEHANEYPEKWIDQMKQIGIYGLAIPEEYGGSPVSMPCYAQVTQELSRGW 79

Query: 175 AP---------------KIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218
                             +F  E       P M    +   + LTE  GG+D+ A+T+  
Sbjct: 80  MSLAGAMGGHTVVAKLISLFGTEEQKVKYLPRMATGEIRATMALTEPGGGSDLQAMTTNA 139

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQ 273
           +     +       W  ++  S    +L + +        G  +V  L+E G   GL   
Sbjct: 140 KSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIV--LVEHG--EGLTVS 195

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGM 328
           R   K+G +   + EL F N   +   +LG      G  + MK L    +  A  ++   
Sbjct: 196 RDLPKLGYKGVESCELSFDNYRISESAILGG-TPGKGFGQMMKGLETGRIQVACRALGVA 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D  +    
Sbjct: 255 TAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDSGERCDM 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 315 EAGMAKLYA-------SEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 365


>gi|226355420|ref|YP_002785160.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317410|gb|ACO45406.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 380

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 17/246 (6%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256
           G  +TE   G+D A I ++ +K  D +Y L+G K ++S +P++    ++A  +   G   
Sbjct: 122 GFAITEPSSGSDAANIRTRAEKRGD-MYILNGTKHYISNAPIAGLLTVIAITDPAQGTRG 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +   L+E  +  GL   ++  K+G +   + E+ F +       LLG  ++  G  E + 
Sbjct: 181 MSAFLVEPQNTPGLSIGKVDEKMGQKGALSSEVIFQDAEVPAANLLGPEHL--GYREALG 238

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           IL    +  A  S   M+  L  ++ +A+ R   G  + +   ++  +A++ + I  +  
Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAKTREQFGQPIAEFQAVQFMLAEMEIAIQTSRL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  ++A   D+ +         R MA + KY   +    V  +A++  GG GY+++  + 
Sbjct: 299 LWQKVAWMVDQKQD-------VRRMASVAKYHATEALSQVADKAVQVAGGMGYMKDSPVE 351

Query: 432 RHYRES 437
           R+YR+ 
Sbjct: 352 RYYRDQ 357


>gi|15608605|ref|NP_215983.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis H37Rv]
 gi|15840927|ref|NP_335964.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31792661|ref|NP_855154.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium bovis AF2122/97]
 gi|121637397|ref|YP_977620.1| putative acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148661259|ref|YP_001282782.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra]
 gi|148822686|ref|YP_001287440.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11]
 gi|167967417|ref|ZP_02549694.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis H37Ra]
 gi|215403320|ref|ZP_03415501.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 02_1987]
 gi|215426806|ref|ZP_03424725.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|215430359|ref|ZP_03428278.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis EAS054]
 gi|215445660|ref|ZP_03432412.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|218753183|ref|ZP_03531979.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|219557374|ref|ZP_03536450.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|224989872|ref|YP_002644559.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799484|ref|YP_003032485.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435]
 gi|254364338|ref|ZP_04980384.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550483|ref|ZP_05140930.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186412|ref|ZP_05763886.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|260200524|ref|ZP_05768015.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|260204749|ref|ZP_05772240.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289442914|ref|ZP_06432658.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|289447069|ref|ZP_06436813.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|289554744|ref|ZP_06443954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605]
 gi|289569490|ref|ZP_06449717.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|289574146|ref|ZP_06454373.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289745217|ref|ZP_06504595.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987]
 gi|289750027|ref|ZP_06509405.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|289753549|ref|ZP_06512927.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054]
 gi|289757576|ref|ZP_06516954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|289761625|ref|ZP_06521003.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|294995020|ref|ZP_06800711.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 210]
 gi|297634032|ref|ZP_06951812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207]
 gi|297731018|ref|ZP_06960136.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN R506]
 gi|306775654|ref|ZP_07413991.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001]
 gi|306779475|ref|ZP_07417812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002]
 gi|306784205|ref|ZP_07422527.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003]
 gi|306788572|ref|ZP_07426894.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004]
 gi|306792915|ref|ZP_07431217.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005]
 gi|306803174|ref|ZP_07439842.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008]
 gi|306807753|ref|ZP_07444421.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007]
 gi|306967573|ref|ZP_07480234.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009]
 gi|306971763|ref|ZP_07484424.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010]
 gi|307079483|ref|ZP_07488653.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011]
 gi|307084042|ref|ZP_07493155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012]
 gi|313658351|ref|ZP_07815231.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2791401|emb|CAA15996.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE15 [Mycobacterium tuberculosis
           H37Rv]
 gi|13881132|gb|AAK45778.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31618251|emb|CAD96169.1| PROBABLE ACYL-COA DEHYDROGENASE FADE15 [Mycobacterium bovis
           AF2122/97]
 gi|121493044|emb|CAL71515.1| Probable acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134149852|gb|EBA41897.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505411|gb|ABQ73220.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra]
 gi|148721213|gb|ABR05838.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11]
 gi|224772985|dbj|BAH25791.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253320987|gb|ACT25590.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435]
 gi|289415833|gb|EFD13073.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|289420027|gb|EFD17228.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|289439376|gb|EFD21869.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605]
 gi|289538577|gb|EFD43155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289543244|gb|EFD46892.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|289685745|gb|EFD53233.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987]
 gi|289690614|gb|EFD58043.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|289694136|gb|EFD61565.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054]
 gi|289709131|gb|EFD73147.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|289713140|gb|EFD77152.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|308215878|gb|EFO75277.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001]
 gi|308327588|gb|EFP16439.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002]
 gi|308331052|gb|EFP19903.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003]
 gi|308334871|gb|EFP23722.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004]
 gi|308338661|gb|EFP27512.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005]
 gi|308345857|gb|EFP34708.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007]
 gi|308350158|gb|EFP39009.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008]
 gi|308354796|gb|EFP43647.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009]
 gi|308358749|gb|EFP47600.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010]
 gi|308362677|gb|EFP51528.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011]
 gi|308366326|gb|EFP55177.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012]
 gi|323720037|gb|EGB29148.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CDC1551A]
 gi|326903090|gb|EGE50023.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis W-148]
 gi|328459232|gb|AEB04655.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207]
          Length = 609

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 47/298 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S     +   + F ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G+ NG+    L++K+G +S+ T EL F        G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ +A+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D+A ++    A          ++ 
Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           PI K    + A  ++ E+++ +GGSG++ +  + ++ R++  +S+  G+     LD  
Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDAKIDSLYEGTTAIQALDFF 458


>gi|307295778|ref|ZP_07575611.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878434|gb|EFN09655.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 119/315 (37%), Gaps = 57/315 (18%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    T    + W PKI S EY                + +TE   G+D+  + +  
Sbjct: 103 APYIETYGTEEQKQRWLPKIASGEY-------------ITAIAMTEPGAGSDLQGVKTTA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGCFLVPRLLEDGSPNGLCYQR 274
           +K  +  Y ++G K F+++  +   + ++A+ +   G  G  +V  ++E     G    R
Sbjct: 150 KKEGNQ-YTINGSKTFITNGQNANLVAVVAKTDPALGAKGISIV--MVETDDAQGFERGR 206

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS--------AI 322
             +KIG     T EL F+        D+ V T    GP E       ++         A+
Sbjct: 207 NLDKIGRDCADTSELFFN--------DVRVPTSNLLGPEEGKGFFQLMEKLPQERLILAV 258

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLA 377
            + + M   L   + Y R R   G  +ID    +  +A+       A       +S  + 
Sbjct: 259 QAAAAMEYILRITVDYVRERKAFGKAVIDFQNTQFKLAEYKTQATIAKVFVNHCVSLHIK 318

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D A             A + KYW       V+   ++  GG GY+ E  IA+ ++++
Sbjct: 319 GELDSA------------TASMAKYWVSDALWEVVDGCLQLHGGYGYMSEYPIAQAFKDA 366

Query: 438 PANSILLGSGNAMVL 452
             N I  G+   M L
Sbjct: 367 RINRIYGGTNEIMKL 381


>gi|146305933|ref|YP_001186398.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574134|gb|ABP83666.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 379

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGWLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L + +  G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVEANTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       + +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------GVGALASAEAALQWTLDYTRERKAFGKAVADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQVGRVFIDRCLELHLQGKLDVPTAA-------MLKYWTTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  IAR + ++    I  G+   M
Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370


>gi|330826585|ref|YP_004389888.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311957|gb|AEB86372.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 399

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 24/257 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P       IG   L+E   G+D+AA++ + +   DG Y L+G K W  +  ++D + + A
Sbjct: 128 PAVARGTKIGAFALSEPDAGSDVAALSCRAEADGDG-YVLNGSKTWISNGGLADFYCVFA 186

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVST 306
           + +   G   +   + D    GL      + I     A++  E        +LG      
Sbjct: 187 RTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLASLHFENCRVPRSCMLGP----- 241

Query: 307 GPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P +  K+      +     A  ++   R ++ E + +A RR + G  L D  + + A  
Sbjct: 242 -PDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQTLADFQLTQAAFG 300

Query: 361 DIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D+A  I  +  L++R A   D + ++ + E A A++ A        + A  VI  A++  
Sbjct: 301 DMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TESAQQVIDRALQMF 353

Query: 420 GGSGYIEERSIARHYRE 436
           GG G      + R YR+
Sbjct: 354 GGKGVTVGNPLERLYRD 370


>gi|239503653|ref|ZP_04662963.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii AB900]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343
            F N     +   NV  G    +K+L+     + A++S      M   L   I Y  +R 
Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + +   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYSAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|225620820|ref|YP_002722078.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
 gi|225215640|gb|ACN84374.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
          Length = 367

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 47/296 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKI------SDGIY 226
           W    F  E       P   +   +G  GLTE   GTD A     GQ+       +   +
Sbjct: 82  WPILQFGTEAQKQKYVPKMASGEWLGAFGLTEPNAGTDAA-----GQQTVAVLDEATNEW 136

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F++ S  ++ +++ A  +   G   +   + + +  G    + + K+G R +A
Sbjct: 137 VINGSKIFITNSGYANVYVIFAMTDKSKGLKGISAFIVESTTPGFTVGKKEKKLGIRGSA 196

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--------- 333
           T EL F N       LLG+L       +  KI      A+M++ G R+ +A         
Sbjct: 197 TCELIFENARIPKDNLLGELG------KGFKI------AMMTLDGGRIGIASQALGIAQG 244

Query: 334 ---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
              E + Y + R   G  + +    +  +A++ + + AA  L ++ A         S +A
Sbjct: 245 ALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEAARLLVYKAAWRESNHLPYSVDA 304

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A A++ A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 305 ARAKLFASET-------AMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEIYEGT 353


>gi|254437348|ref|ZP_05050842.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252794|gb|EDY77108.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 379

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 82/386 (21%), Positives = 160/386 (41%), Gaps = 59/386 (15%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K E  P   W  L       GL+           VR+++     +RL      
Sbjct: 26  PNAQAWEKAENIPKDLWPKLAELGF-GGLY-----------VREESGGSGLSRLDATLVF 73

Query: 147 EAGHLMSPSVTS--------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           EA  +  PSV +        A+M+    +  +   + P+  S E             + +
Sbjct: 74  EALSMSCPSVAAFLSIHNMCAAMIDKFGSDALRAQFLPRALSME-------------MVL 120

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
              LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    S A+I++ +  G  G   
Sbjct: 121 SYCLTEPGSGSDAAALKTRAERTNEG-YALTGTKAFISGGGYSGAYIVMCRT-GDDGPKG 178

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  ++ +   +GL +  L++K+G R+  T +++  +        +  +    E+ K   Y
Sbjct: 179 ISTVIVEDKTDGLSFGGLEDKMGWRAQPTRQVQLDDCH------IPATNLVGEEGKGFTY 232

Query: 318 ---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  S+   + +L + + Y   R   G  +     ++  +AD+ +++ A
Sbjct: 233 AMAGLNGGRLNIAACSLGAAQAALTQTVAYMAERKAFGKSIDQFQALQFRLADMEIELQA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A     + A   D   + + +AA    MA   K +  +    V  + ++  GG GY+ + 
Sbjct: 293 ARVFLHQAAWKLD---TGTPDAAAHCAMA---KKFVTEAGSRVANDCLQLHGGYGYLADY 346

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I +  R+   + IL G+   M + V
Sbjct: 347 GIEKLVRDLRVHEILEGTNEIMRMIV 372


>gi|194748953|ref|XP_001956905.1| GF10158 [Drosophila ananassae]
 gi|190624187|gb|EDV39711.1| GF10158 [Drosophila ananassae]
          Length = 419

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 138 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 183

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            L+G K W  +   +D  I+ A+  G        +  F+V    E     G    +  +K
Sbjct: 184 VLNGSKFWITNGSDADTLIVYAKTGGSDVPNKHSITAFIVETAWE-----GFSVAQKLDK 238

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327
           +G R ++T EL F         DL V    +   E+  + + +          A   V  
Sbjct: 239 LGMRGSSTCELVFQ--------DLKVPAKNILGQENKGVYVLMSGLDFERLVLAAGPVGL 290

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D A +RS
Sbjct: 291 MQAACDVAFDYAHQRKQMNQLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGARS 349

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +     I+      +  + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 350 SKDCAGVIL------YTAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 402


>gi|149922652|ref|ZP_01911079.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica
           SIR-1]
 gi|149816449|gb|EDM75948.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica
           SIR-1]
          Length = 384

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI--YCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251
           + +TE   G+D+A + +  +KI  DG   Y L+G K F+S+ M  D  ++ A+ E     
Sbjct: 123 IAMTEPNTGSDLAGLEATAKKIERDGETRYVLNGSKTFISNGMLCDLCLVAAKTENSEDP 182

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDL 302
              V  F+V    E G+P  +  ++L  K+G  S  T EL F       +N  G      
Sbjct: 183 HRNVSLFVV----EAGTPGFVKAKKLA-KMGLASQDTAELAFEDCEIPEANRIGPEGAGF 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +    ++  ++++    AIM  +     LA+ + Y   R   G  +      +  +AD 
Sbjct: 238 MMLMNKLQQERLVV----AIMCQASAEQVLADTLKYVGEREAFGRPIGKFQNTRFKLADC 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++              D    R  +  Y      + K W  +M   V+ E ++  GG 
Sbjct: 294 ATEVEVGRHF-------LDAVVRRHAKGEYLVKECSMAKLWQSEMLCRVVDECLQFFGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  I+R Y ++    I  G+   M
Sbjct: 347 GYMLEYPISRAYMDARVQRIYAGTNEIM 374


>gi|39934070|ref|NP_946346.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647918|emb|CAE26438.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 381

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 15/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ +   K+    Y ++G K F+++  + D  I++A+  G     L 
Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLDGDDYVINGQKTFITNGQNCDLIIVVARTGGAGAKGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315
             +LE     G    R  +KIG  ++ T EL F N       LLG      G V+ M+ L
Sbjct: 185 LIVLETKDNPGFKRGRNLDKIGLHASDTSELFFENARTPKENLLGG-EEGKGFVQLMQQL 243

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  AI +V+ M  ++A    Y R R   G     QP+++    + A  +A     +
Sbjct: 244 PQERLIIAIGAVAAMERAVALTSEYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F      D    +        + A + K+W  +     + E ++  GG GY++E  I R 
Sbjct: 297 FIARVFVDYCLVQLVAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPIGRM 356

Query: 434 YRESPANSILLGSGNAMVL 452
           + +S    I  G+   M L
Sbjct: 357 FIDSRIQKIYGGTNEVMKL 375


>gi|119774499|ref|YP_927239.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
 gi|119766999|gb|ABL99569.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
          Length = 389

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGPHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + N+  G    +K+L+  
Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDC---EVPEENILGGLNNGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYVHERVQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  ++A  +  +A++ +GG+GY+ E +  R
Sbjct: 306 VYNVARACDRGETTRKDAAGVIL-------YAAELATKMALDAIQLLGGNGYVNEYATGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|15789941|ref|NP_279765.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169235662|ref|YP_001688862.1| acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|10580351|gb|AAG19245.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|167726728|emb|CAP13514.1| putative acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum
           R1]
          Length = 379

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 119/259 (45%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D + +++   +  D  Y L+G K F++ + ++ + ++ A  +   G   +  
Sbjct: 125 LTEPTSGSDASDMSTTATRDGDD-YVLNGTKQFITNASVAGSVVVKAVTDPDAGYDGIST 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            + D + +G       +K+G  ++ T E+ F N       LLG+     G  +  K    
Sbjct: 184 FIVDPADDGFEVTAEWDKMGLNASPTCEISFDNCRIPADRLLGEEG--DGWTQTKKT--- 238

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372
           LD   +S++ +   LA+  + A   + +      QP+     ++  + D+   I  A  L
Sbjct: 239 LDGGRISIAALSTGLAQGAYTAASEYATDREQFGQPISRFDAVRNTLVDMHRKIERARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A+ +D  +S + E+A A++ A        + A  V  +A++ +GG GY  + +  R
Sbjct: 299 TRRAASKYDAGESVTRESALAKLDA-------SEAAREVAEDAVQTLGGYGYTTDFAPQR 351

Query: 433 HYRESPANSILLGSGNAMV 451
            +R+  A  + +G G + +
Sbjct: 352 FFRD--AKLMEIGEGTSEI 368


>gi|91974836|ref|YP_567495.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
 gi|91681292|gb|ABE37594.1| Isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
          Length = 392

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 14/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K+    + L+G K W  + P +D  ++ A+ +       +
Sbjct: 129 LAMSEAGAGSDVVSMKLRADKVGSN-FVLNGTKMWITNGPNADTLVVYAKTDPAAKSKGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F N     + + NV     + +++L+  
Sbjct: 188 TAFIVERDFKGFSTSPKLDKLGMRGSNTCELVFDNC---EVPEANVLGEVGQGVRVLMSG 244

Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              + A+M+   V  M   L   + YAR R   G  + +   ++  +AD+      A A 
Sbjct: 245 LDYERAVMAAGPVGIMAACLDLVVPYARDRKQFGQPIGEFQFIQGKLADMYTAQMTARAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  K    +AA     A I   +  + A  V AEA++ +GG+GY+ E    R
Sbjct: 305 LYGVARAID-GKVLQGQAARKDCAAVI--LYAAEQATKVAAEAIQIMGGNGYVNECPAGR 361

Query: 433 HYRESPANSILLGS 446
           ++R++    I  G+
Sbjct: 362 YWRDAKIFEIGAGT 375


>gi|323359839|ref|YP_004226235.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323276210|dbj|BAJ76355.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 389

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E   T    M +  V    GLTE   G+D A++T++ ++  D        +W   + +
Sbjct: 109 SEEQKQTWLPRMARGEVIGCFGLTEPGSGSDPASMTTRARQDGDAWVLDGAKRWIGLASI 168

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ +  V  FLVP     G+P G     +  K+  R++   ++  ++    L 
Sbjct: 169 ADVAVIWARTDEGVRGFLVP----TGTP-GFVATPIAPKMSMRASIQCDITLTDVRVPLD 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L ++ G       L      I    +   R S A A+ YA  R   G  +    + ++
Sbjct: 224 AVLPLARGLSAPFACLNNARYGIGWGVIGAARDSYATALAYAGERRQFGQPIAAFQLTQQ 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + D+A++I  A  ++ RL    D  + +S + + A++          + A  V+ EA  
Sbjct: 284 KLVDMAIEIEKAQLVALRLGRLKDAGRLQSHQISVAKLA-------NTRAAIDVVREART 336

Query: 418 CIGGSGYIEERSIARH 433
            +GG+G   E S  RH
Sbjct: 337 ILGGNGVTAEFSPMRH 352


>gi|269125411|ref|YP_003298781.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310369|gb|ACY96743.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 380

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +   K  D  Y L+G K F+S+  ++D  I+ A+ +   G   V
Sbjct: 124 IAMTEPAAGSDLQGIKTTAIKDGDH-YVLNGSKTFISNGILADLVIVAAKTDPSAGARGV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R   K+G  +  T EL F N       LLG+  +  G +  M+ L
Sbjct: 183 SLLVVERGMEGFTRGRNLEKVGMHAQDTAELFFDNVRVPKENLLGEEGM--GFIYLMQNL 240

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L     +++G   S  + + Y + R   G  +      +  +A++  ++  A A +
Sbjct: 241 ARERLSIGTSALAGAEASFEQTLEYCKTREAFGRPIGKFQHNRFVLAEMKTELTVARAFT 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +        +  +EEAA       + KYW  ++   V+   ++  GG GY+ E  I + 
Sbjct: 301 EQCILKQVNGELTAEEAA-------MLKYWNTELIKRVVDRCVQLHGGYGYMLEYPIGKA 353

Query: 434 YRESPANSILLGSGNAM 450
           Y++    +I  G+   M
Sbjct: 354 YQDVRIQTIFGGTTEIM 370


>gi|295400863|ref|ZP_06810839.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977126|gb|EFG52728.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++   + +   +  D  Y ++G K ++++   +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNATNLKTTAVRKGDR-YIINGSKHYITNAKDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +   G   +   + +    G    + + K+G R + + EL F         DL V   
Sbjct: 171 VTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRGSHSCELFFE--------DLEVPVE 222

Query: 305 ------STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                   G V  +KIL    + + +  +   +  L +++ YA  R   G  +I+Q  + 
Sbjct: 223 NRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAMEREQFGKPIIEQQAIL 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A++I     +++R+A   D+  +  +EAA       + K +  ++   V   A+
Sbjct: 283 HMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAA-------MVKLYGSEVYNRVADRAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI E  I R YR++    I  G+
Sbjct: 336 QVHGGLGYIAEYPIERFYRDARITRIYEGT 365


>gi|262198058|ref|YP_003269267.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365]
 gi|262081405|gb|ACY17374.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365]
          Length = 413

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 25/261 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKI-----------SDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           L+E   G+D+AA+ ++ + +           +   Y L G K W  +  ++D +++ A+ 
Sbjct: 139 LSEPEAGSDVAAMATEARLLDGGDGAGQGDENGAGYVLRGTKTWISNGGIADFYVVFART 198

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGP 308
               G   +     D    GL      + +     AT+  E        LLG      G 
Sbjct: 199 GEGAGARGLSAFAVDAGAPGLRVAARIDTMAPHPLATLAFEDCRVPADALLG--TAGRGF 256

Query: 309 VEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              M  L    S +   ++   R +L EA+  AR R + GG+L D P+ +  +AD+A ++
Sbjct: 257 HAAMATLDVFRSTVGAAALGFARRALDEAVARARSRVMFGGVLADLPLAQAKLADMATEL 316

Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA  L +R A++ D    R + EAA A       K +  + A  +I +A++  GG G  
Sbjct: 317 DAAALLVYRAAHAKDGGAERVTREAAMA-------KMYATEAAQRIIDDAVQLFGGLGVQ 369

Query: 426 EERSIARHYRESPANSILLGS 446
               +   YRE  A  I  G+
Sbjct: 370 RGSKVEELYREIRALRIYEGA 390


>gi|326316886|ref|YP_004234558.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373722|gb|ADX45991.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 389

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+     +   G Y L G K W  +  ++D +++ A+     G   +
Sbjct: 125 FALSEPEAGSDVAAMGCTA-RAEGGDYVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G         I     A +  +     G  +        P E  K+ +  
Sbjct: 184 SAFIVDADTPGFSIAERIEVIAPHPLARLRFD-----GCRVPAAQRLGAPGEGFKVAMRT 238

Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    SV+       R ++ EA+  A  R + GG+L D  + +  +A +A  I +A  L
Sbjct: 239 LDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQAKLAQMATAIDSAALL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++R A   D   + + EAA A++ A        + A  VI  A++  GG G +  + + R
Sbjct: 299 TYRAAWLRDRGATVTREAAMAKMTA-------TENAQQVIDAAVQLFGGLGVVSGQPVER 351

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 352 LYREIRALRIYEGA 365


>gi|262369648|ref|ZP_06062976.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315716|gb|EEY96755.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 36/284 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              +G L ++E   G+D+ ++  + +   D  + L+G K
Sbjct: 115 YLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLKAEDCGD-HFLLNGSK 159

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D  ++ A+ +   G   +   L +    G  +    +K+G R + T  L F
Sbjct: 160 MWITNGGDADVLVVYAKTDLHAGAKGMTAFLVEKGMEGFSHGTHLDKLGMRGSNTYPLFF 219

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVS 345
            N     +   NV  G     K+L+     + A++S      M   +   I Y   R   
Sbjct: 220 DNV---KVPKENVMGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACMDTVIPYIHDRKQF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPITKY 402
           G  L +  +M+  IAD+     A  AL + +    D+A   +S  ++AA A + A     
Sbjct: 277 GQALGEFQLMQGKIADMYSTWLACKALVYAVGAECDKADHSRSLRKDAASAILYAAEKAT 336

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           W       +  E ++ +GG+GYI E S  R +R++    I  G+
Sbjct: 337 W-------MAGETIQTLGGNGYINEFSAGRLWRDAKLYEIGAGT 373


>gi|302537838|ref|ZP_07290180.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446733|gb|EFL18549.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 401

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 45/280 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  K  D  Y L+G K +L++  S   + +         EG      +   
Sbjct: 135 GSDVSAITSKAVKDGDE-YVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           L +  P       GL      +K+G +   T EL        ++  L +    V   +  
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPANRVLGGQTG 245

Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +  V   RV++A              + YA++RH  G  + +   ++  +A++A
Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           + +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|9789985|ref|NP_062800.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Mus
           musculus]
 gi|66773808|sp|Q9JHI5|IVD_MOUSE RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|7025453|gb|AAF35888.1|AF225989_1 isovaleryl dehydrogenase precursor [Mus musculus]
 gi|7689117|gb|AAF67667.1| isovaleryl CoA dehydrogenase [Mus musculus]
 gi|17390762|gb|AAH18325.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|20073124|gb|AAH27198.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|126541071|emb|CAM46006.1| isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|148695982|gb|EDL27929.1| isovaleryl coenzyme A dehydrogenase [Mus musculus]
          Length = 424

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +       V
Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           P        ++E G P G    +  +K+G R + T EL F +     +   NV +   + 
Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + +L+  LD   + ++G     M+  L   I Y   R   G  +    +M+  +AD+   
Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+    + +A + DE     ++ A   +       +  + A  V  + ++C+GG+GYI
Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +  + R  R++    I  G+G + V
Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410


>gi|89092356|ref|ZP_01165310.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083444|gb|EAR62662.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 373

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++    +   D  Y L+G+K W  + P ++ +++ A+ + + G    
Sbjct: 115 LAMSEPNAGSDVVSMKLHARDNGDH-YLLNGNKMWITNGPDANTYVIYAKTDIKAGPKGI 173

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             F+V R      P    +Q+L +K+G R + T EL F +       +LG+LN       
Sbjct: 174 TAFIVERDF----PGFSRHQKL-DKLGMRGSNTCELVFEDCPVPKENILGELNGG----- 223

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + +SG  + + EA     I Y R R   G  + +  +++  +AD+  
Sbjct: 224 -VKVLMSGLDYERLVLSGGPLGIMEAAMDIVIPYIRDRKQFGQAIGEFELVQGKVADMYS 282

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+ +  +  A +    ++  ++AA   +       +  +MA  +  +A++ +GG+GY
Sbjct: 283 IMNASKSYVYMAAQAAVRGEASRKDAAGCIL-------YTAEMATKIALDAIQLLGGNGY 335

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 336 INEFPTGRLLRDAKLYEIGAGT 357


>gi|195375915|ref|XP_002046743.1| GJ12315 [Drosophila virilis]
 gi|194153901|gb|EDW69085.1| GJ12315 [Drosophila virilis]
          Length = 347

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC 255
           GL ++E   G+D+ A+  + ++  D  Y L+G K W  +   +D  I+ A+    G    
Sbjct: 85  GLAMSEVGAGSDVLAMKLRAERKGD-YYLLNGTKFWISNGSDADTLIVYAKTGASGDPDR 143

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +   + + S  G    +  +K+G R ++T EL F N       +LG  N   G    M
Sbjct: 144 KAITAFIIETSWEGFSVGKKLDKLGIRGSSTCELVFDNVKVPAKNVLGQEN--NGVYVLM 201

Query: 313 KILIYLDSAIMSVSG--MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L Y  + +  VS   M+ +   A  YA  R   G ++ +  +++  +AD+   I++  
Sbjct: 202 SGLDYERAVLSGVSMGLMQAACDVAFEYAHERKQMGKLIGEFQLIQGKMADMYTTISSCR 261

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +  S D     S++ A   ++       C + +  V  +AM+ +GG+GYI +   
Sbjct: 262 SYFYTVVRSLDAGMRSSKDCAGVFLL-------CGEKSTQVALDAMQILGGNGYINDYPT 314

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 315 GRILRDAKLCEIAGGT 330


>gi|169126473|gb|ACA48487.1| putative acyl-CoA dehydrogenase [Bacillus thuringiensis]
          Length = 312

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 23/210 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K W  +   R++ P     M K ++     LTE   G+D  A+ +  ++++D  + L+GH
Sbjct: 94  KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W   + ++D F++ A  EG+V  F+V R     S  G+   ++   + + S+   E+ 
Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR 342
             +       LLG +      V    +   LD    S++   V++A+      + Y+RRR
Sbjct: 204 LQDVKVPAENLLGPIGGGWSYV----VNTALDHGRYSIAWAGVAIAQEALEAMVAYSRRR 259

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATAL 372
                 + +   ++  +A+ +++I AA +L
Sbjct: 260 KQGNKYICEYEAIQTILAEASVNIKAARSL 289


>gi|192289597|ref|YP_001990202.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283346|gb|ACE99726.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 381

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 15/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ +   K+    Y ++G K F+++  + D  I++A+  G     L 
Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLDGDDYVINGQKTFITNGQNCDLIIVVARTGGAGAKGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315
             +LE     G    R  +KIG  ++ T EL F N       LLG      G V+ M+ L
Sbjct: 185 LIVLETKDNPGFKRGRNLDKIGLHASDTSELFFENARTPKENLLGG-EEGKGFVQLMQQL 243

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  AI +V+ M  ++A    Y R R   G     QP+++    + A  +A     +
Sbjct: 244 PQERLIIAIGAVAAMERAVALTSEYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F      D    +        + A + K+W  +     + E ++  GG GY++E  I R 
Sbjct: 297 FIARVFVDYCLVQLVAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPIGRM 356

Query: 434 YRESPANSILLGSGNAMVL 452
           + +S    I  G+   M L
Sbjct: 357 FIDSRIQKIYGGTNEVMKL 375


>gi|170720997|ref|YP_001748685.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169759000|gb|ACA72316.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWQGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|87121583|ref|ZP_01077471.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86163115|gb|EAQ64392.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 393

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A+++++  ++  G Y L+G+K W  +SP++D F++ A++EG +  F++
Sbjct: 138 FGLTEPDSGSDPASMSTRAIQVEGG-YRLTGNKMWITNSPIADVFVVWAKLEGVIRGFIL 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
                D   +GL   +++ K   R++ T E+   + F     +  D+    GP       
Sbjct: 197 -----DKGMSGLSAPKIEGKFSLRASITGEIVMDDVFVPQENIFPDIKGLAGP------F 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE    A R +       ++P     ++++ +AD+  DI+   
Sbjct: 246 GCLNKARFGIAWGAMGAAEFCFDAARTYTLDRKQFNRPLAANQLIQKKLADMQTDISLGL 305

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               ++    D+ +   E       +  + K   C  A  +   + +  GG+G  +E  +
Sbjct: 306 QGCLQMGRLMDQEQCPVE-------LISLMKRNNCGKALDIARVSRDMHGGNGISDEFGV 358

Query: 431 ARH 433
            RH
Sbjct: 359 IRH 361


>gi|332304683|ref|YP_004432534.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172012|gb|AEE21266.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 394

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 20/239 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ S  +K+ DG Y L+G+K W  +SP++D FI+ A+++G +  F  
Sbjct: 139 FGLTEPNSGSDPASMLSYARKVDDG-YLLNGNKMWITNSPIADVFIVWAKLDGVIRGF-- 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ K   R++ T E+   +       +L D+    GP   +   
Sbjct: 196 --ILEKGMA-GLTSPKIEGKFSLRASITGEIVMQDVLVPEENILPDVKGLKGPFSCLNKA 252

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  S+        +A  Y   R      L    ++++ +AD+  +I+    L+  
Sbjct: 253 RY-GIAWGSLGAAEFCWHQARQYCLDREQFARPLAANQLIQKKLADMQTEISIGL-LACL 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMECIGGSGYIEERSIARH 433
            A    +A     EA     ++ I +  C K +  A IA  M   G +G  +E  + RH
Sbjct: 311 QAGRLMDANDLPPEA-----ISLIKRNSCGKALEIARIARDMH--GANGVSDEYHVIRH 362


>gi|289643093|ref|ZP_06475224.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289507137|gb|EFD28105.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 386

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 36/297 (12%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A + TP     W P + S E             +   + +TE   G+D+  + ++  +  
Sbjct: 104 AELATPEQLGRWVPGMTSGE-------------LVAAIAMTEPGAGSDLRGVRTRATRTP 150

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            G + L+G K F+S+ + +D  I++AQ   +G  G  L+  ++E G   G    R   K+
Sbjct: 151 GG-WLLNGAKTFISNGIHADLVIVVAQTGSDGDAGLSLL--VVERGMA-GFARGRNLGKV 206

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLA 333
           G  +  T EL F N     + D NV   P   ++ L+       L  A+ +V+ M   LA
Sbjct: 207 GLHAQDTAELSFDNV---AVPDANVLGQPGRGLRYLMANLAQERLTIAVQAVAAMEGVLA 263

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + + Y R R   G     QP+ +   +   L   A T  + R+   +   +  +E  +  
Sbjct: 264 DTLDYVRTRTAFG-----QPIGRFQHSAFLLAELATTVKAARVFVDWGVEEHLAE--SLG 316

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              A + K    +    V+   ++  GG GY  E  + R + ++   +I  G+   M
Sbjct: 317 ADTAAVIKLHTTEAQQRVVDRCLQLHGGYGYTTEYRVGRAWADARVQTIYGGTSEMM 373


>gi|322705469|gb|EFY97055.1| acyl-CoA dehydrogenase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 441

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 28/321 (8%)

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +L    L  P  +  +  A    P V   W  K   + + P      ++T +AI    TE
Sbjct: 111 ELARSGLAGPGASLTAGFAFGIPPIVK--WGSKELKQRFLPDFLTGRKRTCIAI----TE 164

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPR 260
              G+D+A IT+  +K +DG  Y ++G  KW  +   SD   M  +    GR G  ++  
Sbjct: 165 PDAGSDVANITTTAEKTADGKHYIINGAKKWITNGIWSDYTTMAVRTGGAGRAGLSVIIV 224

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313
            L+ G P G+  +RL    G ++  T  +E  N       LLG     L +        +
Sbjct: 225 PLK-GHP-GVTMRRLPVG-GQKAGGTTYIELDNVKVPVENLLGREGDGLRIILTNFNHER 281

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++I    A+      R +LA A  Y  +R   G  L+DQPV++  +A    ++    A +
Sbjct: 282 LII----AVGVTRQARTALAAAFEYCLKRDAFGKKLMDQPVVRHRLAKAGAELETMNAWT 337

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---I 430
            +L        S+  +     I A + K     +       A+   GG+G+        +
Sbjct: 338 EQLLYQLCHLSSQEADLKLGGITA-LAKAKSAMVLNECAQVAVLLFGGNGFTASGQGALV 396

Query: 431 ARHYRESPANSILLGSGNAMV 451
              YR+ P   I  GS + ++
Sbjct: 397 EAIYRDVPGARIPGGSEDVLL 417


>gi|312129771|ref|YP_003997111.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906317|gb|ADQ16758.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 21/240 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLV 258
            GLTE   G++   + +  ++  D +       W  ++P  D  ++ A+ E GR+   +V
Sbjct: 132 FGLTEPDFGSNPGGMLTHFREEGDFLILNGSKTWISNAPFCDIAVVWAKNEQGRIKGLIV 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G     +KNK   R++AT EL F       +   N+  G       L  L
Sbjct: 192 ERGME-----GFSTPEIKNKWSLRASATGELVFDEV---KVPKSNLLPGADGLRSPLKCL 243

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALS 373
           D+A   +S   +  A   +   +++    I  D+P+      ++ +A+   +I  A  L+
Sbjct: 244 DNARYGISWGAIGAAVDCYLTAKQYALERIQFDKPIASFQLTQKKLAEFLTEITKAQLLT 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++L  + +  K+ S + + A       K     MA  +  EA + +GG+G   E SI RH
Sbjct: 304 WKLGVNKNAGKASSAQISMA-------KRNNVAMALNIAREARQILGGNGITGEFSIMRH 356


>gi|296169372|ref|ZP_06850996.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895961|gb|EFG75652.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 382

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 32/302 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  ++  +A   +    K W PK+ S E             + I + +TE   G+D+ +I
Sbjct: 99  STLASHYIAEYASEEQKKRWIPKMVSGE-------------MVIAVAMTEPGTGSDLQSI 145

Query: 215 TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +   +  D  Y ++G K F+S+    D  +++A+ E  +   +     E     G    
Sbjct: 146 RTTAVRDGDE-YVINGSKTFISNGSHCDLVVIVAKTESGLSLMVA----ETEGLAGFQRG 200

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGM 328
           R+  K+G     T EL F++       LLG +    G  + M+ L    L   + +++  
Sbjct: 201 RVLEKVGQHGQDTRELAFTDMRVPAANLLGGVE-GKGFAQLMEQLPRERLTIGVEAIAMA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             ++ E I Y + R   G  L+     K  +A+   ++ A  AL        D    R  
Sbjct: 260 EAAVVETIRYVKERTAFGKPLLAFQNTKFVLAECKAEVLAGKAL-------IDYCTGRYL 312

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +       A I K W       V  + ++  GG GY+ E  IA+ Y  +    I  G+  
Sbjct: 313 DGKLDAATASIAKMWGSDKQVEVTDKCLQLFGGYGYMMEYPIAQMYAAARVQKIYGGTNE 372

Query: 449 AM 450
            M
Sbjct: 373 IM 374


>gi|269925483|ref|YP_003322106.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789143|gb|ACZ41284.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 406

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +        LTE   G+D A I +  ++  D  Y L+G K W   +  +D F++ A 
Sbjct: 113 PQARGEKLATFALTEPGHGSDAANIETTARREGD-YYVLNGQKTWISLADKADHFLLFAT 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           ++   G   +   + +    GL    +  K+G R+  T ++   N    +   L      
Sbjct: 172 LDRSKGYKGITAFILERGFEGLSTSTIHGKLGVRAGNTGQIFLDNVRVPIENRLGEEG-- 229

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  +D   ++V+   V LA A     + Y   R   G  +    ++++ IA++
Sbjct: 230 -EGFKIAMSAIDQGRLTVAAGAVGLARACLEASLKYCHDREAFGQEIGKFQLVQQMIANM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            L I  A  L  R A   +     + E + A       K++ C +A     +A+E  G +
Sbjct: 289 QLGIDTAKLLVHRAAWLKNHGIRSTRETSMA-------KWYACNVALKAAEDAIEIHGAN 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  E  + R++R +    I  G+
Sbjct: 342 GYSNEFPVERYWRNARGAVIYEGT 365


>gi|146283538|ref|YP_001173691.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145571743|gb|ABP80849.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 134/308 (43%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +   + +
Sbjct: 134 NAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G       +K+G R + T EL F +        L V  G V   K+L+  LD   +
Sbjct: 193 RDWKGFSRGNKFDKLGMRGSNTCELFFDDVEVPQENVLGVENGGV---KVLMSGLDYERV 249

Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++G     M+  L   + Y   R   G  + +   ++  +AD+   + A+ A  + +A 
Sbjct: 250 VLAGGPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQ 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R  R++ 
Sbjct: 310 ACDRGETTRKDAAGVIL-------YTAENATQMALQAIQILGGNGYINEFPTGRLLRDAK 362

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 363 LYEIGAGT 370


>gi|126327516|ref|XP_001374385.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase-8 [Monodelphis
           domestica]
          Length = 415

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 31/273 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  ++  D  Y L+G K F+S +  SD ++++ +  G     +   
Sbjct: 160 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGAGESDIYVVMCRTGGSGPKGISCL 218

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++E  +P GL + + + K+G  S+    + F +              GFL+    ++ G 
Sbjct: 219 VIEKDTP-GLSFGKKEKKVGWNSHPIRAVIFEDCVVPVANRIGDEGQGFLIAMKGLNGGR 277

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +         + A  S+     S+  A +Y   R   G  L     ++  +AD+A  + A
Sbjct: 278 I---------NVASCSLGAAHASIVLARNYLNVRKQFGKPLASNQYLQFKLADMATRLVA 328

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L  R A     A +  EE A A ++  + K +  +   ++  +A++  GG GY+++ 
Sbjct: 329 SR-LIIRNA-----AVALQEERADAMVLCSMAKLFATEECFSICNKALQMHGGYGYLKDY 382

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460
           ++ ++ R+S  + IL GS   M +L   NLL++
Sbjct: 383 AVQQYVRDSRVHQILEGSDEVMRMLISRNLLQE 415


>gi|160899128|ref|YP_001564710.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364712|gb|ABX36325.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 29/272 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254
           LTE   G+D  ++ ++ + ++   Y ++G K F+S   S   ++L    G  G       
Sbjct: 124 LTEPGAGSDAGSLKTRAE-LAGHEYIINGAKAFISGAGSTDMLVLMARTGDAGSGASGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F VP  L      G+ Y + + K+G  S  T  + F N     +   N+     E  KI
Sbjct: 183 AFAVPADLP-----GISYGKKEEKMGWNSQPTRVISFDNV---RIPAQNLLGREGEGFKI 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       ++ A  SV   + +L +A  Y   R   G  +     ++  +AD+A ++ A
Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQQYMHERKQFGKPIASFQALQFKLADMATELVA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +  RLA S  +A +R      A     + K +       V  EA++  GG GYI E 
Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFVTDAGFMVCNEALQLHGGYGYIREY 348

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
            + R  R++  + IL G+   M V+    +LE
Sbjct: 349 PLERLMRDARVHQILEGTNEIMRVIIARRMLE 380


>gi|323137070|ref|ZP_08072150.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397831|gb|EFY00353.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 413

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 37/312 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+ +  +PR  ++W P++ S E   +               LTE   G+D AA+ ++ 
Sbjct: 125 AGMIDVFGSPRQRREWLPRLVSMETLSS-------------YCLTEPGCGSDAAALRTRA 171

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           ++  D +Y ++G K F+S   +      +I++A+  G+ G   V   + +G+ +G+ +  
Sbjct: 172 ERDGD-VYVVNGEKQFISGASAGGDRHLYIVMART-GQDGPGGVSTFVIEGTSHGMRFGS 229

Query: 275 LKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            + K+G  +  T  + F N         G       ++   ++  +    L+    S+ G
Sbjct: 230 NERKMGWNAQPTRAIFFENCRVPAENMLGEEGAGFKIAMAGLDGGR----LNIGACSLGG 285

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L + + Y R R   G  L D   ++  +AD+      AT L    A  +  A +  
Sbjct: 286 AQSTLMKTLDYMRERKAFGKPLDDFQALQFRLADM------ATGLETARALLWRAAAALD 339

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            +A  A I+  + K     +   V   A++  GG GY+ +  + +  R+   + IL G+ 
Sbjct: 340 AKAKDASILCAMAKRVATDVGFDVANNALQLHGGYGYLCDYGVEKIVRDLRVHQILEGTN 399

Query: 448 NAMVLDVL-NLL 458
             M L V  NLL
Sbjct: 400 EIMRLIVARNLL 411


>gi|268551861|ref|XP_002633912.1| C. briggsae CBR-IVD-1 protein [Caenorhabditis briggsae]
 gi|187023762|emb|CAP37120.1| CBR-IVD-1 protein [Caenorhabditis briggsae AF16]
          Length = 417

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E + G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 157 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 215

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLV    E  +P G       +K+G R + T EL F N     + +  +  G  + + 
Sbjct: 216 TCFLV----EKNTP-GFTQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 267

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +SG     M+ +   A  YA +R   G  +    +++  +AD+   + 
Sbjct: 268 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 327

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ +  + +A + D+    +++ A   +       +  +    V  +A++ +GG+GYI +
Sbjct: 328 ASRSYLYMVAKAADKGNISNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 380

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               R  R++    I  G+     L +   L K
Sbjct: 381 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 413


>gi|321462443|gb|EFX73466.1| hypothetical protein DAPPUDRAFT_188892 [Daphnia pulex]
          Length = 277

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 33/262 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TE   G+D+AAI ++ +K  D  Y L+G K W  ++  ++ + +LA+        L P
Sbjct: 11  GVTEPGAGSDVAAIKTKAEKKGDH-YVLNGQKMWITNAGHANWYFVLARTN------LDP 63

Query: 260 R---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           +          + D    GL   R +  +G R++ T  + F +    L+   NV  G   
Sbjct: 64  KAPAHKALTGFIVDRDTPGLTPGRKEINMGQRASDTRGITFED---VLVPKENVLIGEGT 120

Query: 311 DMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +I +   D    +V+   V LA     EA  YA  R   G  +    ++   +A++A+
Sbjct: 121 GFEIAMGAFDRTRPTVASGAVGLAQRALDEATKYALERSTFGVPIAKHQLVMNMLAEMAM 180

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I +A  +  R +   D+ +  +  A+ A+ MA      C         +A++  GG+GY
Sbjct: 181 SIESARLVWMRASWETDQGRRNTYYASIAKAMAADVANKCA-------TDAVQIFGGNGY 233

Query: 425 IEERSIARHYRESPANSILLGS 446
             +  + +  R++    I  G+
Sbjct: 234 NTDYPVEKLMRDAKIYQIYEGT 255


>gi|306842316|ref|ZP_07474976.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306287573|gb|EFM59029.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 592

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 131/297 (44%), Gaps = 42/297 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-----ARIMAP 398
                +I+ P ++R +  +     AA ++++  A++ D + +     A      A ++ P
Sbjct: 339 AGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHATDGADAQFWSDRAGLLTP 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|269926290|ref|YP_003322913.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789950|gb|ACZ42091.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 26/235 (11%)

Query: 216 SQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           ++ +K +DG + LSG K F++ +P+ D FI+LA ++ R   FLVPR       +GL  + 
Sbjct: 144 TRAEKKNDG-WVLSGRKSFVTGAPILDYFIVLAAIDDRRASFLVPR-----DSDGLSIEE 197

Query: 275 LKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             N +G R++ + +L     F    FL+     S  P    ++      + +++S + + 
Sbjct: 198 TWNTLGMRASGSHDLLLEEVFVPDEFLIIP-KESQAPANSGRVW-----SALTLSAIYLG 251

Query: 332 LAEA-----IHYARRRHVS--GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +A+A     + + + R  S  G  + +   ++ A+ +IA DI  A       A  + +  
Sbjct: 252 IAKAAQEFIVDFCKNRIPSALGKPIAELEHVQHALGEIAADIRIAEITLETTAKRWTQNI 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              ++ +       +TKY C   A  V  +AM   GGS   ++  + R++R++ A
Sbjct: 312 PIRDKISGD---VALTKYTCTNCAVKVTDKAMRIAGGSALSKKLPLERYFRDARA 363


>gi|121707134|ref|XP_001271742.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119399890|gb|EAW10316.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 542

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +  +DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 266 ICLAITEPDAGSDVANLTCEAKLSADGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMN 325

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + S  G+  +R+  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 326 GISVLLIERSAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 378

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 379 VIMTNFNHERIGIVIQCVRFARVCYEESVKYAHKRRTFGKKLIDHPVIRMKLAHMARQIE 438

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMEC 418
           A       L N   + +S  E  A  ++          A  T  +C + A  +       
Sbjct: 439 ATYNW---LENIIYQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYS 495

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 496 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 524


>gi|109080651|ref|XP_001096354.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 423

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 51/297 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 147 EKYLPKLTSGEY--------------IGALAMSEPNSGSDVVSMKLKAEKKGDH-YVLNG 191

Query: 231 HK-WFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  I+ A+ +         +  F+V    E G P G    +  +K+G R
Sbjct: 192 NKSWITNGPDADVLIVYAKTDLAATPASRGITAFIV----EKGMP-GFSTSKKLDKLGMR 246

Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAE 334
            + T EL F +       +LG  N          ++  LD   + ++G     M+  L  
Sbjct: 247 GSDTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDH 301

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   
Sbjct: 302 TIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVI 361

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +       +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 362 L-------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|291239179|ref|XP_002739510.1| PREDICTED: Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Saccoglossus kowalevskii]
          Length = 428

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 31/259 (11%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GRV 253
           TE  GG+D+A + +  +   D  Y ++G K W  +   ++ + +LA+ +        G  
Sbjct: 165 TEPGGGSDVARMCTFAENKGDH-YVINGQKMWITNGGKANWYFVLARTDPDLKRPASGAF 223

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R     +P      R +  +G R + T  + F +    ++   NV  G  +  K
Sbjct: 224 TGFIVDRDTPGVTPG-----RKELNMGQRCSDTRGITFEDV---VVPKENVLLGEGDGFK 275

Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +   D     ++   V LA     EA  YA  R   G ++     +   +A++A+ I 
Sbjct: 276 IAMAAFDRTRPPIAAGHVGLAQRAFDEATKYALERKTMGKVIAQHQAVAFMLAEMAIGIE 335

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +    ++    +D+    +  A+       I K W   +A     +A++  GG GY  E
Sbjct: 336 TSRLAIYKCCWEYDQGHKNTYSAS-------IAKAWAADVANKCATDAVQIFGGYGYNSE 388

Query: 428 RSIARHYRESPANSILLGS 446
            S+ +  R++ A  I  G+
Sbjct: 389 YSVEKLMRDAKAFQIYGGT 407


>gi|41407811|ref|NP_960647.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396165|gb|AAS04030.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 30/287 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PKI S E               + + +TE   G+D+ ++ +  ++  D  Y ++G 
Sbjct: 115 RRWLPKIISGE-------------AVLAIAMTEPGTGSDLQSVKTTARRDGD-FYVINGS 160

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVE 288
           K F+S+    D  +++A+ +   G   V  ++ +   N  G    R+  K+G  +  T E
Sbjct: 161 KTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETDENLAGFERGRVLAKMGQHAQDTRE 220

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L FS+       LLG      G  + M+ L    L  A +  +   V++ EAI Y+R R 
Sbjct: 221 LFFSDMRVPVANLLG-AQEGLGFYQLMEQLARERLIIATICEALAEVAVLEAIKYSRERE 279

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G     +P+ K       L      AL+ +     D A  +  +       A + K +
Sbjct: 280 AFG-----RPIGKFQHTKFVLAECKTEALAIK--TMVDYAVGQYLDGKNDPATASMAKLF 332

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             + +  ++ + ++  GG GY+ E  IA  Y  S  N I  G+   M
Sbjct: 333 AAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVNRIYGGTSEIM 379


>gi|12836655|dbj|BAB23751.1| unnamed protein product [Mus musculus]
          Length = 424

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +       V
Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           P        ++E G P G    +  +K+G R + T EL F +     +   NV +   + 
Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + +L+  LD   + ++G     M+  L   I Y   R   G  +    +M+  +AD+   
Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+    + +A + DE     ++ A   +       +  + A  V  + ++C+GG+GYI
Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +  + R  R++    I  G+G + V
Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410


>gi|23098125|ref|NP_691591.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776350|dbj|BAC12626.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 392

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 109/289 (37%), Gaps = 57/289 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML---------AQV 249
             +TE   G+D   I      + DG  + L+G K F++      F+M+          + 
Sbjct: 126 FAMTEPGAGSDTQNIKMTA--VKDGSEWVLNGEKTFITGGNEADFVMVIAITDKELHQKT 183

Query: 250 EGRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +GR G  CF+  R           + +  P  L ++             V +   N  G 
Sbjct: 184 KGREGVTCFIADRDMGWESEYIHTMGEWGPASLFFE------------NVRIPEKNILGE 231

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           L    N+          L ++  A   V    V  AE     AI Y++ R   G  + ++
Sbjct: 232 LHKGYNLG---------LEWIGFARWIVGARAVGTAERLLQMAIDYSKERETFGKPISER 282

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD A+++ AA  L    A + D+ +         R +A I K +   M   V+
Sbjct: 283 QAIQWQIADSAVEVEAARWLVLNAAFTLDQGEDN-------RHLASIAKLYGANMGTRVV 335

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              M+  GG GY  E  I R YRE+    I  G+     L +   L KG
Sbjct: 336 DRVMQIHGGMGYTRELPIERWYREARLWRIYDGTDEIQRLIISRNLLKG 384


>gi|12857011|dbj|BAB30859.1| unnamed protein product [Mus musculus]
          Length = 424

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +       V
Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           P        ++E G P G    +  +K+G R + T EL F +     +   NV +   + 
Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + +L+  LD   + ++G     M+  L   I Y   R   G  +    +M+  +AD+   
Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+    + +A + DE     ++ A   +       +  + A  V  + ++C+GG+GYI
Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +  + R  R++    I  G+G + V
Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410


>gi|312221968|emb|CBY01908.1| similar to glutaryl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 426

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 19/252 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++      G Y LSG K W  +SP++D  ++ A
Sbjct: 153 MAKGQLLGCFGLTEPNHGSDPGSMETVARPHPTKKGYYSLSGSKTWITNSPIADVLLVWA 212

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
           ++E  G++  F+V R  +   P  L    +KNK G R++ T  ++  +   +   +  ++
Sbjct: 213 KLESTGKIRGFVVER--DQCPPGTLETPAIKNKNGLRASITGMIQLDDCPVSEANMFPEI 270

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361
               GP   +    Y   A  ++  +   ++    YA  R+   G  +    ++++ +AD
Sbjct: 271 EGLRGPFSCLNSARY-GIAWGTIGALEDCISRTRQYALDRKQFKGNPIAKYQLVQKKLAD 329

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              D A     + ++    DE K+  E       M  + K   C  A        E  GG
Sbjct: 330 ATTDAAYGILAAHQVGRLKDEGKASPE-------MISMIKRQNCDRALVNARTLQEVFGG 382

Query: 422 SGYIEERSIARH 433
           +   +E  I RH
Sbjct: 383 NAVSDEYGIGRH 394


>gi|254466164|ref|ZP_05079575.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium
           Y4I]
 gi|206687072|gb|EDZ47554.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium
           Y4I]
          Length = 379

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 55/335 (16%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           MA    G  +S       M+    +    + W P + S          M+K        L
Sbjct: 78  MADPAVGSFLSIHNMCGGMIDKFGSAETKQKWLPSLCS----------MEKI---FSYCL 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVP 259
           TE   G+D AA+ ++ ++ +DG Y L+G K F+S    SDA++++ +   +G  G   V 
Sbjct: 125 TEPGSGSDAAALKTRAERTNDG-YSLNGTKAFISGGSYSDAYVVMCRTGEDGPKGISTV- 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            ++EDG+P GL +  L++K+G ++  T +++F +       L+G         E+ K   
Sbjct: 183 -VVEDGNP-GLSFGALEDKMGWKAQPTSQVQFDDCAIPADHLIG---------EEGKGFS 231

Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           Y   A+  + G R++++            + + Y   R   G  +     ++  +A+   
Sbjct: 232 Y---AMAGLDGGRLNISAGALGGAQAALDQTVQYMSERKAFGKSINQFQALQFRLAEYET 288

Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            + AA     + A   D  A   ++  A A++M   T +        V    ++  GG G
Sbjct: 289 RLQAARTFLRQAAWKLDTGAHDATKFCAMAKLMVTDTAF-------DVANGCLQLHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + +  R+   + IL G+   M L V   L
Sbjct: 342 YLADYGVEKIVRDLRVHQILEGTNEIMRLIVARQL 376


>gi|297189978|ref|ZP_06907376.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718635|gb|EDY62543.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 21/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251
           + +TE   G+D+A I +  +   DG  + L+G K F++  + +D  +++ +         
Sbjct: 124 IAMTEPGAGSDLAGIKTSARLSEDGTHWILNGAKTFITGGVHADRVLVVCRTSPAPAENR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
           R+G  L   L+ D    G    R   KIG R++ T EL FS+       LLG+   +   
Sbjct: 184 RLGLSL---LVVDAHAEGFAVGRKLEKIGLRTSDTAELSFSDVKVPVEDLLGEEGNAFSY 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +  ++  L   I + +  R ++  A+ Y R+R V G  +      K  +A+ A ++ A
Sbjct: 241 LSENLVVERLFIGISATASARAAIDFALEYTRQREVFGKSVASFQNTKFVLAECAAEVEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  ++ R     D     + +AA  R+     K +  ++A  VI + ++  GG GYI E 
Sbjct: 301 AQVMTDRALELHDVGALTAADAA--RL-----KLFTTEVAGRVIDKCLQLHGGYGYILEY 353

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR Y ++  + I  G+   M
Sbjct: 354 PIARLYADTRVSRIYAGTNEVM 375


>gi|167768304|ref|ZP_02440357.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1]
 gi|167709828|gb|EDS20407.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1]
 gi|291560280|emb|CBL39080.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
          Length = 380

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEGRV 253
           LTE   G+D A   +    I +G  Y L+G K F+++ P++D ++++A      + +G +
Sbjct: 125 LTEPDAGSDAAGCKTTA--IWNGKEYILNGLKCFITNGPLADYYMVVALTNPELKTKG-L 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R  E     G+   ++++K G R     E+ F N       +LG+     G   
Sbjct: 182 TAFIVEREWE-----GVSIGKIEDKCGIRCAQVSEVIFDNVRVPKENMLGE--EGKGFAV 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK L   D   + V+   + +A+     A +Y + R   G  L     +   +A++  +
Sbjct: 235 AMKDL---DGGRIGVAAQGLGIAKGAYDIAFNYLKEREQFGKPLYKNQYLAFKMAELETE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  + ++ A    E +S S  AA A+++       C   A  V  EA++ +GG+GY+
Sbjct: 292 IEMAQYMLYKAATDKQEGRSYSVPAAKAKMV-------CTDAAMHVATEAVQMLGGNGYM 344

Query: 426 EERSIARHYRESPANSILLGS 446
           +E  + R  R++    I  G+
Sbjct: 345 KEYHVERMLRDAKITQIYEGT 365


>gi|121636127|ref|YP_976350.1| putative acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224988600|ref|YP_002643287.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121491774|emb|CAL70236.1| Probable acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224771713|dbj|BAH24519.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 36/284 (12%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       +LG   +  G  + MK L    +  A  ++     +L +++ YA++R  
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRES 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A       
Sbjct: 276 FGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA------- 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            ++A  +   A+   GG GY  E  + R++R+SP   ++LG G 
Sbjct: 329 SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDSPL--MILGEGT 370


>gi|46198844|ref|YP_004511.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|55980861|ref|YP_144158.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|46196467|gb|AAS80884.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|55772274|dbj|BAD70715.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 577

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 40/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  A  ++     DG  Y L+G K W  ++  +  F + A+V+G     FLV
Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFLV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        GL +   + K+G ++++T ++        +L D+ V   PVE++   I  
Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               +V G + +L  +  YA +R   G  +    ++++ + ++A 
Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMAS 311

Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417
            I AA +  +R     DEA    +  EA  A I      A I K    ++   V+ E ++
Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY +E  I R YR++  N I  G+
Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400


>gi|331011702|gb|EGH91758.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 333

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 31/209 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L   DGS    N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
               L +A+  ++   V+    + YAR R
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDR 321


>gi|324515461|gb|ADY46208.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 303

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+AAI ++ +K  D  Y ++G K W      +  F +LA+ E       G+ 
Sbjct: 37  VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKTPAGQA 95

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +    ++   NV   P    
Sbjct: 96  FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 147

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D+    V+   V LA     EA  YA  R   G  +     +   +AD+A+++
Sbjct: 148 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 207

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +++R A   D  K RS         A I K +    A    A A++ +GG+G+  
Sbjct: 208 ELARLVTYRAAVDVDN-KERSS------YYASIAKCFAADTANITAANAVQILGGNGFNS 260

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 261 EYPVEKLMRDAKIYQIYEGT 280


>gi|306844215|ref|ZP_07476808.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1]
 gi|306275490|gb|EFM57227.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1]
          Length = 385

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +   M   V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDMGFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|293603226|ref|ZP_06685658.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818358|gb|EFF77407.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 26/303 (8%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++LM +  + + + P++             Q  ++A    L+E   G+D+AA+  +  K+
Sbjct: 109 ISLMGSDELRQRYLPRV------------AQGQAIA-AFALSEPDAGSDVAALACEA-KL 154

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
               Y L+G K W  +  ++D +++ A+     G   +   + D    G         I 
Sbjct: 155 DGDHYVLNGAKTWISNGGIADFYVVFARTGEAPGARGISAFVVDADTPGFEVSERIELIA 214

Query: 281 NRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHY 338
               AT+  +         LG+       +  M + I+  S   +  G  R +L E +  
Sbjct: 215 PHPLATITFDNCRVPLSHRLGEAGQGF-KLAMMTLDIFRASVAAAALGFARRALDEGLAR 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMA 397
           A+ R + G  L D  + + A+ D+A  I A+  L++R A   D  K R+  EAA A++ A
Sbjct: 274 AKSRRMFGQTLADLQLTQAALGDMATAIDASALLTYRAAWMRDVQKLRTTREAAMAKMTA 333

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A  VI  A++  GG+G +    + + YRE  A  I  G+     L +   
Sbjct: 334 -------TESAQTVIDRALQMFGGAGVVSGMPVEKLYREIRALRIYEGATEVQKLIIARE 386

Query: 458 LEK 460
           L K
Sbjct: 387 LLK 389


>gi|18313385|ref|NP_560052.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160916|gb|AAL64234.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 380

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 36/278 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
             L+E   G+D AAI +   +   G + ++GHK W  +   +D +++ A+   R      
Sbjct: 122 FALSEPCCGSDAAAIQTAAVR-RGGEWVINGHKMWITNGHYADYYLVAARTGPREARHKA 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
           +  FL+ R          C +  + ++ G R   T E++F+N       ++G++N     
Sbjct: 181 ITVFLLKR--------SNCVETSQIEVMGVRGTGTAEVKFNNCAASDDDIVGEVNGGWKV 232

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + D      L+    ++SG+ V +A     EA+ +AR R +    LI+    +  +A++ 
Sbjct: 233 IVDT-----LNVGRTAISGVTVGIARGAFEEALKWARNRELFDRKLIEFQNTQFELAEMY 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I  A  L++  A  +D        +    IM+ + K    ++A  V   A++  GG G
Sbjct: 288 ASIETARTLAYYAAYLYDI------NSPGFLIMSHVAKLQTARIAVDVTRRAVQIEGGFG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y +E      YR++    I  G+   M   +  L+EKG
Sbjct: 342 YSKESKAEMFYRDAKILEIGEGTNEVMKYVIYKLIEKG 379


>gi|296156721|ref|ZP_06839559.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295893320|gb|EFG73100.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 377

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+++   ++  I+ A  +   G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGARANVAIVFAVTDPDRGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   + +A A       YA  R   G  L +   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDAARLYANERIQFGKALKEHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A    E K    EA+ A++ A        ++A  + + A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRTEGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|163752168|ref|ZP_02159372.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161327945|gb|EDP99121.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 421

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 31/209 (14%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  +  A+    +  + + +  K+ S E+  T             + LTE   GT
Sbjct: 117 MYPGLTHGAYAAIHAHGSDALKQKYLKKLVSGEWTGT-------------MNLTESHAGT 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258
           D+A + ++  +  +G + +SG K F+SS   D       +MLA++    EG  G   F V
Sbjct: 164 DLALLRTKAVEAGEGRFAISGEKIFISSGDHDLAENIIHLMLARLPDAPEGVKGISLFAV 223

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+++ +     G  N LC   L++K+G   N+T  + F    G L+G+ +     +  M 
Sbjct: 224 PKIMVNADGSLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLKAMFTMM 283

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
               L   +  +    ++   A+ YA+ R
Sbjct: 284 NQARLGVGVQGLGVSEIAYQNALAYAKDR 312


>gi|73537981|ref|YP_298348.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121318|gb|AAZ63504.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 33/265 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A I+ +  +  D  + ++G+K++ +      FI+   V  R    + P+ 
Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGNKYWCTFADEADFIL---VICRTDPVIDPKA 178

Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEF-------SNTFGFLLGDLN 303
              G        P G   + +K     KIG     T EL F       S   G       
Sbjct: 179 RHKGLSAFMVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDGCRVPHSKMVGEEGKAFY 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++T  +E  +      +A  S+   + SL ++I YA+ R+  G  + +   ++  IAD+A
Sbjct: 239 LTTAGLETARA----HTAARSIGLAQGSLEDSIQYAKGRNQFGNPIGNFQAIRFKIADMA 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+ AL + +    DE      EA+  ++ A        +M   V +E ++  GG+G
Sbjct: 295 TQIEASRALLYTVCEKIDEGVRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y    +  R++R++    I  G+ +
Sbjct: 348 YTTHFAAERYWRDARLTKIFEGTSD 372


>gi|66045706|ref|YP_235547.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256413|gb|AAY37509.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           B728a]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGMLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|312111285|ref|YP_003989601.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216386|gb|ADP74990.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 390

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++   + +   +  D  Y ++G K ++++   +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNATNLKTTAVRKGDR-YIINGSKHYITNARDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +   G   +   + +    G    + + K+G R + + EL F         DL V   
Sbjct: 171 VTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRGSHSCELFFE--------DLEVPVE 222

Query: 305 ------STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                   G V  +KIL    + + +  +   +  L +++ YA  R   G  +I+Q  + 
Sbjct: 223 NRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAMEREQFGKPIIEQQAIL 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A++I     +++R+A   D+  +  +EAA       + K +  ++   V   A+
Sbjct: 283 HMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAA-------MVKLYGSEVYNRVADRAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GYI E  I R YR++    I  G+
Sbjct: 336 QVHGGLGYIAEYPIERFYRDARITRIYEGT 365


>gi|148234611|ref|NP_001086893.1| acyl-CoA dehydrogenase family, member 9 [Xenopus laevis]
 gi|50416552|gb|AAH77618.1| Acad9-prov protein [Xenopus laevis]
          Length = 622

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 42/314 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     DG  + L+G K W  +  ++D F + A+ E         
Sbjct: 181 LTEPGSGSDAASIQSRATLTPDGKHFLLNGSKIWISNGGLADIFTVFARTEVVDKDGVTK 240

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+ + + ++K+G R + T EL F NT        G + G   
Sbjct: 241 DKISAFIVERAF-----GGVTHGKPEDKLGIRGSNTCELHFENTKVPVENVIGEVGGGFK 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361
           V+      M IL     ++ S S G+   L E    YA  R      L D  +++   A 
Sbjct: 296 VA------MNILNSGRFSMGSASAGIIKKLIEMTAEYACTRKQFNKKLSDFQLIQEKFAL 349

Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +A       ++++  A   D       S EAA  ++ +     W C      ++EA++ +
Sbjct: 350 MAQKAFVMESMAYLTAGMMDRPGLPDCSVEAAMVKVFSS-EGAWLC------VSEALQIL 402

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG GY+++    R+ R+S    I  G+     M + +  +   G  L  ++    + ++G
Sbjct: 403 GGLGYMKDYPYERYLRDSRILLIFEGTNEILRMYIALTGMQHAGKILTGKIKEMKKGNVG 462

Query: 478 SSGKKVITILRDSI 491
            + +     LRDS+
Sbjct: 463 VAMELFFKKLRDSM 476


>gi|325122834|gb|ADY82357.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 381

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A  A   R    
Sbjct: 247 -ASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|295695028|ref|YP_003588266.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295410630|gb|ADG05122.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 401

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D+AA+ +   +  +G Y L+G K W   + ++D F++ A 
Sbjct: 114 PQAKGEKLGAFGLTEPGAGSDVAAMQTTAVRDGEG-YRLNGSKIWISLADVADHFLVFAY 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +       +   + + +  G   + +K K+G R+  T E+ F + +   + + N     
Sbjct: 173 TDKTKKHHGITAFIVERTWPGFSSRPIKGKLGIRAGNTGEIIFEDLW---VPEENRLGEE 229

Query: 309 VEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD+   +V+      ++  L  ++ Y+  R   G  +    ++++ IA +
Sbjct: 230 GEGFKIAMSALDNGRFTVAAGACGTIQACLEASLKYSHERETFGQEIGRHQLVQQMIAKM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++  +  L ++     ++ +  + E + A+ +A       C  A    ++A++  G  
Sbjct: 290 AANLEISRLLVWKAGWLKNQGQRCTREVSLAKWVA-------CDAAWEAASDAVQIHGAY 342

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  E  + R+ R + A  I  G+
Sbjct: 343 GYSNEYPVERYLRNAKAPVIYEGT 366


>gi|302544872|ref|ZP_07297214.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462490|gb|EFL25583.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ +SD + ++A 
Sbjct: 121 PLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FYVLNGVKRWITNAGVSDYYTVMAV 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + +    G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 180 TDPEKRSKGISAFVVEKDDEGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 238 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVIAE 414
           D+A+ I AA AL+++ A            AA  R+ A +T      K +   +A  V  +
Sbjct: 295 DMAMKITAARALTYQAA------------AASERVDADLTFQGAAAKCFASDVAMEVTTD 342

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ +GG GY  +  + R  R++    I  G+
Sbjct: 343 AVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 374


>gi|146101225|ref|XP_001469060.1| acyl-CoA dehydrogenase [Leishmania infantum]
 gi|134073429|emb|CAM72157.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5]
          Length = 412

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 46/348 (13%)

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170
           +PVV K+A       +   A LE G +                P+V+    V       +
Sbjct: 58  DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++A     R+Y P     + K +V     LTE   G+D  A+ ++ +K     + ++G
Sbjct: 118 FFNFANDAQRRKYLPK----LAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K ++++   +  F+++A V+   G     CF+V    +     G+   R +NK+G R++
Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETPGVSVVRTENKLGIRAS 227

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
           +T EL   N     + + NV     +  KI I  L+   + +    + +A+      + Y
Sbjct: 228 STAELRLENV---EVPEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G  + D   M+   A+ A+++ AA  + +  +      +   ++AA A     
Sbjct: 285 LFQRKQFGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             KY+   +A    + A+E  GG G++++  + R YR++   +I  G+
Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385


>gi|154250934|ref|YP_001411758.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154884|gb|ABS62101.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 40/250 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D +AI +   K +DG + L G K W  ++ ++D FI   Q +   G     C
Sbjct: 128 LSEPGAGSDFSAIRTSATK-TDGGWRLDGEKGWITNAGIADLFITYVQTDPAAGWRGIAC 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV     D    G         +G  +         N   +L  + ++  GP +  K+ 
Sbjct: 187 FLV-----DARRPGFRRAEPYALMGGHAIGAGGFTLEN---YLAPEDDMLAGPGDAFKL- 237

Query: 316 IYLDSAIMSVSGMRV------------SLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+  V+G RV            SL  A+ Y   R   G  L++   +  ++ D+A
Sbjct: 238 -----AMKGVNGARVYVAAMCAGLLASSLETALAYGAARKTFGKSLLEHQGLNWSLGDVA 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D+ A   L+       D  +     AA+A       K +  ++    IA+ ++ +G +G
Sbjct: 293 NDLEALRGLTLHAGRLIDSGEDAVMAAAHA-------KKFAGRVTLPRIADCIQSMGATG 345

Query: 424 YIEERSIARH 433
             EE  +ARH
Sbjct: 346 LREEHGLARH 355


>gi|148547014|ref|YP_001267116.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511072|gb|ABQ77932.1| isovaleryl-CoA dehydrogenase [Pseudomonas putida F1]
 gi|313498060|gb|ADR59426.1| Ivd [Pseudomonas putida BIRD-1]
          Length = 387

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|291303360|ref|YP_003514638.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572580|gb|ADD45545.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 616

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 171/378 (45%), Gaps = 61/378 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    ++D  I  +LA+  G     
Sbjct: 164 LTEPDAGSDVGAGRAKAYQQPDGSWHIEGVKRFITSGEHDLTDNIIHYVLARPVGVDGVG 223

Query: 253 ------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
                 +  F+VP+   D      G  NG+    +++K+G + + T EL F       G+
Sbjct: 224 GPGTKGLSLFVVPKFHFDAETGELGDRNGVYATNVEHKMGLKVSTTCELTFGEKHPAKGW 283

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILI---- 350
           L+G+ +     +  M ++I     ++   +++ +      A+ YA+ R V G  L+    
Sbjct: 284 LMGEKHEG---IRQMFLIIEYARMMVGSKAIATLSTGYLNALEYAKSR-VQGADLLRSTD 339

Query: 351 ---------DQP------VMKRAIADIALDIAAATAL---SFRLANSFDEAKSRSEEAAY 392
                    + P      +M+++ A+    +   TA      R+A    +A++    A  
Sbjct: 340 KSAPRVTITNHPDVRRSLLMQKSYAEGLRALVCYTASWQDKQRIAEDAGDAETEKLAARV 399

Query: 393 ARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           + ++ PI K    + A  +++ E+++  GGSG++++  I ++ R+S  +++  G+     
Sbjct: 400 SDLLLPIIKGCGSERAYELLSSESLQTFGGSGFLQDYPIEQYVRDSKIDTLYEGTTAIQS 459

Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           LD L   +++ G      + + + Q LG+ G + +  +R S+    E+   A   +   A
Sbjct: 460 LDFLFRKIVKDGGVALGTVATEIGQWLGADGPESLKGIRASLGEALEN-AQAMLGSLGTA 518

Query: 510 LASSAAA----LYRAGMN 523
           L +S       LY+AG++
Sbjct: 519 LGASQQGQPRELYKAGLH 536


>gi|119898221|ref|YP_933434.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670634|emb|CAL94547.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 393

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D  ++ ++ +K+  G Y +SG K W  +
Sbjct: 114 FGTEAQKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMITRAKKVPGG-YSISGAKMWITN 172

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG +  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 173 SPIADVFVVWAKDDEGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 227

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
                    +    GP         L+SA   ++   +  AEA +     Y   R   G 
Sbjct: 228 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I        ++    D   +  E       +  I K   C  
Sbjct: 282 PLAANQLVQKKLADMLTEITLGLQACLQVGRLKDAGNAPVE-------ITSIIKRNSCGK 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 335 ALDIARTARDMLGGNGISDEFCVARH 360


>gi|323360059|ref|YP_004226455.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323276430|dbj|BAJ76575.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 386

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 30/253 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQVEGRVG-- 254
           G GLTE   G+D  A T    ++  G + + G K F+++  +    F+ +  V GR G  
Sbjct: 126 GFGLTEAEAGSDAGA-TRTTARLEGGEWVIDGSKQFITNSGTAITRFVTVTAVTGRTGER 184

Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                 +VP    +G+P G       +K+G  ++ T  L F    G  + + N+     +
Sbjct: 185 PEISTIIVP----NGTP-GFTVGPAYDKVGWNASDTHPLTFD---GVRVPEANLLGERGQ 236

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K  L  LD   ++++ +    AE     A+ YAR R V G  L  +  ++  +A +  
Sbjct: 237 GFKNFLRTLDEGRVAIAALATGAAEGCLEAAVDYARSRTVFGERLSTRQSIQFLLARMHA 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A       A   D  K  S +AA A++ A          A A   +A +  GG+G+
Sbjct: 297 RVHTARLAWVHAARLCDAGKPFSVDAAVAKMTA-------SDAAMANARDATQVFGGNGF 349

Query: 425 IEERSIARHYRES 437
           I E  +ARHYR+S
Sbjct: 350 INEYPVARHYRDS 362


>gi|260901259|ref|ZP_05909654.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|308106805|gb|EFO44345.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
          Length = 389

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F+N       +LG LN     VE +   
Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  +   + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMNAAKAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 VYTVAAACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|303279086|ref|XP_003058836.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459996|gb|EEH57291.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 445

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 47/286 (16%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A I    ++ +DG  Y +SG K ++++ +   +  +A   G  G  
Sbjct: 157 ICLCITEPWAGSDVANIRCVAKRSADGTKYVVSGEKKWITNGIWADYFTVAVRTGGPGMG 216

Query: 257 LVPRLLEDGSPNGLCYQRL----------------------KNKIGNRSNATVELEFSN- 293
            +  L+ + +  G+  +R+                      +N IG  + A   L +S+ 
Sbjct: 217 GISLLVVEKTMKGVETKRMDCMGVWASGTTFVTFDDVEVPAENLIGEENQARSILHWSSY 276

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F +++ + N                  + +    RV   EA  YA RR   G  LI+
Sbjct: 277 DRGFKYVMHNFNHER-----------WGFVVQANRFARVCYEEAFKYAHRRRTFGKKLIE 325

Query: 352 QPVMKRAIADIALDIAAATAL----SFRLANSFDE--AKSRSEEAAYARIMAPITKYWCC 405
            PV++  +AD+A  I A  A+    ++++     E  AK+ +   A A++ A     +C 
Sbjct: 326 HPVIRAKLADMARQIDATHAMMETITYQMCTMTREESAKALAGVTALAKVQATKVFEYCA 385

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           + A  +   A    GG G      + R YR+  A +I  GS   M+
Sbjct: 386 REAAQIFGGASYTRGGVG----EKVERLYRDVRAYAIPGGSEEIMM 427


>gi|188036192|pdb|2Z1Q|A Chain A, Crystal Structure Of Acyl Coa Dehydrogenase
 gi|188036193|pdb|2Z1Q|B Chain B, Crystal Structure Of Acyl Coa Dehydrogenase
          Length = 577

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 40/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  A  ++     DG  Y L+G K W  ++  +  F + A+V+G     FLV
Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFLV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        GL +   + K+G ++++T ++        +L D+ V   PVE++   I  
Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               +V G + +L  +  YA +R   G  +    ++++ + ++A 
Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMAS 311

Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417
            I AA +  +R     DEA    +  EA  A I      A I K    ++   V+ E ++
Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY +E  I R YR++  N I  G+
Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400


>gi|115387881|ref|XP_001211446.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195530|gb|EAU37230.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 436

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 19/303 (6%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   TP   + W P++              K  +   LG+TE   G+D+A I +  ++ 
Sbjct: 133 IARFGTPEQRRRWLPEV-------------AKGDIRFCLGITEPDAGSDVANIRTTAKRE 179

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D  Y ++G K ++++ +   +   A   G  G   +  L+   +  G+  +R+ N   N
Sbjct: 180 GDH-YVVNGSKKWITNGIWADYCTAAVRTGGPGRSGISLLVVPLTAPGVTRRRMYNSGVN 238

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            S +T  +EF +       L+G+ N     +        L  A  S+   RV   +A +Y
Sbjct: 239 ASGSTF-IEFDDVRVPVDHLIGEENKGFALIMSNFNPERLSLACASLRLARVCAEDAFNY 297

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  LI +  ++  I    L I  A A   +L +  +  K R  +      M  
Sbjct: 298 AVQRETFGSPLIQRQAIQAKIFKFGLMIEPAYAFMEQLVHIIELTKDRPVDDVRIGGMTA 357

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNL 457
           + K    +     + EA + +GG+GY +    AR  + S  A   ++G G+  ++  L L
Sbjct: 358 LLKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLAL 417

Query: 458 LEK 460
            E+
Sbjct: 418 QEE 420


>gi|291301369|ref|YP_003512647.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290570589|gb|ADD43554.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 380

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 44/303 (14%)

Query: 170 VHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
           VH D A    SR      K    + +    +   + ++E   G+D+  I +    + DG 
Sbjct: 90  VHNDMAVPYLSRLATEEQKDRWFSGLCAGELIAAIAMSEPGAGSDLQGIATTA--VRDGE 147

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K F+++ + +D  I+LA+ +          F V R +E     G    R  +K
Sbjct: 148 DYVLNGQKTFITNGIHADLVIVLARTDPEAAHLGFSLFAVERGME-----GFERGRKLDK 202

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDS---------AIMSVSG 327
           IG R+  T EL F+        D+ +    +  E+ K  IYL           A++  +G
Sbjct: 203 IGMRAQDTAELFFN--------DVRIPAANLVGEEGKGFIYLMEGLPRERLAIAVVGQAG 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                 E + Y R R   G  +     ++  +A++  ++        +   + +  +   
Sbjct: 255 AEAVFDETVEYVRGRKAFGRNIGKFQHVRMTMAEMKTELHIGRTFVDQCMLALNAGELDV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       ++K+W  +M   V  + ++  GG GY+ E  IA+ Y ++ A +I  G+ 
Sbjct: 315 TEAA-------MSKWWITEMQKRVTDQCLQLHGGYGYMSEYPIAQAYLDTRAQTIYGGTT 367

Query: 448 NAM 450
             M
Sbjct: 368 EIM 370


>gi|115495621|ref|NP_001069019.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|116242943|sp|Q0NXR6|ACAD8_BOVIN RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8;
           Short=ACAD-8; Flags: Precursor
 gi|90658380|gb|ABD97096.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus]
 gi|90658382|gb|ABD97097.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus]
 gi|119223979|gb|AAI26751.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Bos taurus]
          Length = 416

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +   +  D  Y L+G K F+S    +D ++++ +  G     + C 
Sbjct: 161 LTEPGSGSDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCV 219

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F +              GFL+    +
Sbjct: 220 VV----EKGTP-GLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGL 274

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+  A  Y + R   G  L +   ++  +AD+A 
Sbjct: 275 NGGRI---------NVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAA 325

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L  R A     A +  EE   A ++  + K +      A+  +A++  GG GY
Sbjct: 326 RLVASR-LMIRTA-----ATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGY 379

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 380 LKDYAVQQYVRDSRVHQILEGSNEVM 405


>gi|83748534|ref|ZP_00945555.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207742117|ref|YP_002258509.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83724838|gb|EAP71995.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593505|emb|CAQ60432.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 393

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 17/308 (5%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +       R   P  KA   P   +   +G L ++E 
Sbjct: 75  HMIAMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKARYLPKLVSGDWVGALAMSEP 134

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  + ++  D  Y L+G K W  + P  D  ++  + E  +G   +   + +
Sbjct: 135 NAGSDVVSMKLRAERRGD-RYVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F N       +LG+ N  T  +  M  L Y + A
Sbjct: 194 KGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERA 250

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S   +  M+  +     Y   R   G  + +  +++  IAD+   + A  A  + +  
Sbjct: 251 VLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGK 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D A  R       +  A +  Y   + A  +  EA++ +GG+GYI E    R +R++ 
Sbjct: 311 NLD-ALGREHVRQVRKDCAGVILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAK 368

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 369 LYEIGAGT 376


>gi|254254420|ref|ZP_04947737.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158]
 gi|124899065|gb|EAY70908.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158]
          Length = 377

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAMTDPEAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           F+VP         G    + + K+G R++ T  +   N       LLG+    L ++   
Sbjct: 184 FIVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  L +   +++ +AD+A  I A
Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMATQINA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|321461401|gb|EFX72433.1| hypothetical protein DAPPUDRAFT_110684 [Daphnia pulex]
          Length = 392

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 33/288 (11%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP- 238
           ++Y P   A  + +++A    +TE   G+D+  I S  +K  DG  Y L+G K F+++  
Sbjct: 115 QKYIPDMTAGKKISAIA----MTEPDAGSDLQGIKSFARK--DGSDYILNGSKMFITNGW 168

Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           ++D  +++A    E +     +   L D    G     L  KIG  ++ T  L F +   
Sbjct: 169 LADVVVVVAVTNKEAKSAAHGISLFLVDADTPGFKKSWLMKKIGMGASDTAGLFFEDVRL 228

Query: 295 -FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
               LLG+ N      ++  P E + I       + + +       E   Y  +R   G 
Sbjct: 229 PASALLGEENKGFYYLMNELPQERLTI------GVHACAHSEFMFEETKQYVMQRKAYGK 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L +   ++  +A++  +I  A A         D+  +  EE      MA + K W  ++
Sbjct: 283 TLSNLQTIQHKLAEMKTEICVARAF-------IDQCIALHEEQQLDAQMACMAKIWASEL 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + A+ ++  GG+GY+ +  IAR Y ++   +I  GS N ++ D++
Sbjct: 336 ENKIAAQCLQLHGGAGYLYDTPIARAYLDARVQTIYGGS-NEVLKDLI 382


>gi|306415525|gb|ADM86729.1| acylCoA dehydrogenase [Delftia acidovorans]
          Length = 562

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 44/331 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +  P + + +++A  T  +  + W P+I S   DP            +G+ +TE   G+D
Sbjct: 245 ITRPEILARALLAGGTEEQ-KRHWLPRIASG--DPL-----------VGIAITEPDYGSD 290

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGC--FLVPRLLE 263
           +A+++ +  +   G        W   +  +   +++A+ +     G  G    LV +   
Sbjct: 291 VASLSLKATRCPGGWRLDGAKTWCTFAGKAGLLMVVARTDPDRAAGHKGLSLLLVEKPSH 350

Query: 264 DG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDM 312
           +G       +  G    R    IG R   + +L F N F      + G+  +  G    M
Sbjct: 351 EGHDFAFGQTGGGRLTGRAIPTIGYRGMHSFDLSFENFFVPDACVVGGEAGLGKGFYFTM 410

Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++   + +A  +   MR +L  A+ YA  R V    L    + +   A +A  +AA  
Sbjct: 411 AGMVGGRMQTAARACGVMRAALKAAVRYAGDRKVFAAPLASYTLTQVKFARLAARLAACR 470

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++ + +  ++ + R E        A + K + C+ A  +  EA++  GG GY EE + 
Sbjct: 471 HLTYAVGHMLEDGRGRME--------ASLVKLFACRSAELISREALQIHGGMGYAEETAA 522

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLE 459
           +R++ ++   SI  G+   + L V+  +LLE
Sbjct: 523 SRYFIDARVLSIFEGAEETLALKVIARSLLE 553


>gi|13472548|ref|NP_104115.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14023294|dbj|BAB49901.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 398

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 23/243 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ +K ++G Y LSG K W  ++P++D F++ A+++G  G   +
Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTANG-YKLSGSKMWISNAPIADVFVVWAKLKGETGKDEI 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    GL   ++  K+  R++ T E+           LL +     GP       
Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA   
Sbjct: 251 GCLNRARYGISWGSMGAAEDCWHRARQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGL 310

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    D  K   E       M  I K   C  A  +  +A +  GG+G      +
Sbjct: 311 QASLRVGRLLDAGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363

Query: 431 ARH 433
            RH
Sbjct: 364 MRH 366


>gi|322701978|gb|EFY93726.1| acyl-CoA dehydrogenase, putative [Metarhizium acridum CQMa 102]
          Length = 441

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 34/324 (10%)

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +L    L  P  +  +  A    P V   W  K     + P      ++T +AI    TE
Sbjct: 111 ELARSGLAGPGASLTAGFAFGIPPIVK--WGSKELKERFLPDFLTGRKRTCIAI----TE 164

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPR 260
              G+D+A IT+  +K +DG  Y ++G  KW  +   SD   M  +    GR G  ++  
Sbjct: 165 PDAGSDVANITTTAEKSADGKHYIINGAKKWITNGIWSDYTTMAVRTGGPGRAGLSVIIV 224

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
            L+ G P G+  +RL    G ++  T  +E  N     +   N+     + ++I++    
Sbjct: 225 PLK-GHP-GVSMRRLPVS-GQKAGGTTYIELDNV---KVPVENLVGREGDGLRIILTNFN 278

Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+      R +L+ A  Y  +R   G  L+DQPV++  +A    ++    A + 
Sbjct: 279 HERLIIAVGVTRQARTALSAAFEYCLKRDAFGKKLMDQPVVRHRLAKAGAELETMNAWTE 338

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC----IGGSGYIEERS- 429
           ++       KS+  +     I A + K      +  V+ E  +C     GG+G+      
Sbjct: 339 QILYQLCHLKSQEADLKLGGITA-LAK----AKSAMVLNECAQCAVLLFGGNGFTASGQG 393

Query: 430 --IARHYRESPANSILLGSGNAMV 451
             +   YR+ P   I  GS + ++
Sbjct: 394 ALVEAIYRDVPGARIPGGSEDVLL 417


>gi|288803247|ref|ZP_06408681.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica
           D18]
 gi|288334288|gb|EFC72729.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica
           D18]
          Length = 577

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 28/291 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  + +++K+G   + T EL + N    L G  +   G ++   ++
Sbjct: 231 RGLSMFIYDKRDGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--SSRMGLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ A + ++   V L      E + YA+ R   G  +++ P +   ++ +   + A  
Sbjct: 287 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKDRAQFGKKIVNFPAVYDMLSRMKAKLDAGR 346

Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413
           +L ++ A   D  K+              R E   Y R+     P+ K    + A     
Sbjct: 347 SLLYQTARYVDIYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +++   GGSG+I E    R YR++   SI  G+    V+  +  +  GT L
Sbjct: 407 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL 457


>gi|218510845|ref|ZP_03508723.1| Acyl-CoA dehydrogenase [Rhizobium etli Brasil 5]
          Length = 395

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 38/272 (13%)

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQV-----------EGRVGCFLVPRLLEDGSPNG 269
           Y L G+K ++S    D       ++LA+V           EG +  F+VP+ L DG+ N 
Sbjct: 20  YRLVGNKMWISGGDQDVSENIVHLVLAKVAAGNEALPVGTEG-LSLFIVPKYLPDGTRND 78

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAI 322
           +    L +K+G R  A   L    T    G+++G     L      + + +I + L +A 
Sbjct: 79  IAIAGLNHKMGYRGTANCLLNLGETTGAIGWIVGQPGQGLRQMFQMMNEARISVGLGAAA 138

Query: 323 MSVSGMRVSLAEAIHYARRR--HVSGG---ILIDQPVMKRAIADIALDIAAATAL---SF 374
           +   G R+S+  A    + R   V  G    +I+   +KR +      +  A AL   S 
Sbjct: 139 VGYRGYRLSVGYANERLQGRPAGVRNGPQVPIIEHSDVKRMLLTQKAYVEGALALCLYSA 198

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL +  D A S    A    ++ PITK W  +        A++  GG GY  +  + + +
Sbjct: 199 RLVDDEDNADS----ANLLGLLTPITKTWPSEYGLLANDIAIQVHGGYGYTRDFDVEQLW 254

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
           R++  N+I  G+      D+L   +L  GT +
Sbjct: 255 RDNRLNTIHEGTTGIQAGDLLGRKILRDGTGM 286


>gi|333024974|ref|ZP_08453038.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744826|gb|EGJ75267.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 382

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+ F N    +  D  +    
Sbjct: 175 TDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 233 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I+AA AL+++ A + +   +   +  Y    A   K +   +A  V  +A++ +G
Sbjct: 290 DMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369


>gi|310799288|gb|EFQ34181.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 432

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 40/264 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
           P   T   +G  GLTE   G+D  ++   ++      G Y LSG K W  +SP++D  ++
Sbjct: 157 PAMATGKMLGAFGLTEPNHGSDPGSMETVARPHPTKKGYYSLSGSKTWITNSPIADVLLV 216

Query: 246 LAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            A+++  G++  FLV R     S   L    +KNK G R++ T  ++        L D  
Sbjct: 217 WAKLQETGKIRGFLVER--SQCSAGTLETPPIKNKNGLRASITGMIQ--------LDDAP 266

Query: 304 VSTGPVEDMKILIY--------LDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGIL 349
           V   P E+M   +         L+SA   ++ G+  +L + +  AR     RR      L
Sbjct: 267 V---PAENMFPSVEGLRGPFSCLNSARYGIALGVMGALEDCVARARAYALERRQFKNNPL 323

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++++ +AD A D A  T  + ++    DE K+  E       M  + K   C  A 
Sbjct: 324 ARYQLVQKKLADAATDAAYGTVAAIQVGRLKDEGKATPE-------MISMVKRQNCDRAL 376

Query: 410 AVIAEAMECIGGSGYIEERSIARH 433
                  E  GG+   +E +I RH
Sbjct: 377 HNARVLQEIFGGNAVSDEYAIGRH 400


>gi|293609569|ref|ZP_06691871.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828021|gb|EFF86384.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 380

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 90  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 137 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 195

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 196 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A  A   R    
Sbjct: 246 -ASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVAL 304

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 305 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 357

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 358 QRIYGGTNEIM 368


>gi|254237074|ref|ZP_04930397.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719]
 gi|126169005|gb|EAZ54516.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719]
          Length = 642

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252
           LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++     G 
Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225

Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            G   FLVP+ L  +DG+    N +    +++K+G +++AT  + F    G+L+G++N  
Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
              +  M     L   I  +    +S   A+ YAR R
Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARER 322


>gi|154248630|ref|YP_001419588.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162715|gb|ABS69931.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 397

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 22/252 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A + ++ +KI DG Y L+G K W  +SP++D  ++ A
Sbjct: 128 PKLATGEWIGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLNGAKMWITNSPIADLAVVWA 186

Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +    +  +  F+V R ++     G    +++ K+  R++ T E+   +       LL +
Sbjct: 187 KSAAHDNAIRGFVVERGMK-----GFSTPKIEGKLSLRASITGEIVLEDVEIPEENLLPN 241

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           ++   GP   +    Y      ++       A+A  Y   R   G  L    ++++ +AD
Sbjct: 242 VSGLAGPFGCLNRARY-GIGWGAMGAAEACFAQARQYTLDRKQFGKPLAATQLVQKKLAD 300

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A DIA       R+   F+E +   E  ++        K   C  A  +   A +  GG
Sbjct: 301 MATDIAFGLQACLRVGRLFEEGRLPPETISF-------IKRNNCGKALDIARTARDMHGG 353

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 354 NGISAEFHVIRH 365


>gi|134292055|ref|YP_001115791.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135212|gb|ABO56326.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 377

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M     G+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LHDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308
           FLVP         G    + + K+G R++ T  +   N       LLG+    L ++   
Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCTLPADALLGNRGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +  +A  YA  R   G  + +   +++ +AD+A  I A
Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A++ A        +MA  V ++A++  GG GY+ + 
Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|309779044|ref|ZP_07673812.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308922204|gb|EFP67833.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 377

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T  AIG   LTE   G++   + ++   + DG + L+G+K F+++
Sbjct: 101 FGTEAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRA-VLRDGKWVLTGNKQFVTN 159

Query: 238 -PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              +D  I+ A  +   G      F+VP      +P G    R ++K+G R++ T  +  
Sbjct: 160 GARADIAIVFAVTDPDAGKRGISAFIVP----TDTP-GFHVGRPEHKLGIRASDTCPITL 214

Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                   N  G     L ++   +E  +I I    A  +V   R +   A +YA  R  
Sbjct: 215 EDCAVPEENLLGERGEGLKIALSNLEGGRIGI----AAQAVGIARAAFDAARNYANERIQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L +   +   +AD+A  + AA  L    A      K    EA+ A       K + 
Sbjct: 271 FGKALREHQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYA 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++A  + + A++  GG GY+ + ++ RHYR++    I  G+
Sbjct: 324 SELAEEICSNAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|256822285|ref|YP_003146248.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795824|gb|ACV26480.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 386

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +   D  Y L+G+K W  + P +D  ++ A+ E   G   +
Sbjct: 127 LAMSEPGAGSDVVGMKLRAELKGDK-YILNGNKMWITNGPEADVLVVYAKTEPDAGSKGI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-EDMKILIY 317
              + +    G    +  +K+G R + T EL F +     +   NV  GP+ E +KIL+ 
Sbjct: 186 TAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDC---EVPAENV-MGPINEGVKILMS 241

Query: 318 ---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               + A++S      MR  +   + Y   R   G  +    +++  +AD+   + A+ A
Sbjct: 242 GLDYERAVLSAGPLGIMRACMDVVVPYVHERKQFGKPIGSFQLIQGKVADMYTTMNASRA 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A S D  ++  ++AA A + A        + A  +  +A++ +GG+GYI E S  
Sbjct: 302 YVYAVAKSCDRGETTRKDAAAAILFA-------AENATKLALDAIQVLGGNGYINEYSTG 354

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 355 RLLRDAKLYEIGAGT 369


>gi|182434967|ref|YP_001822686.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775484|ref|ZP_08234749.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463483|dbj|BAG18003.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655817|gb|EGE40663.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 401

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 47/281 (16%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPR 260
           G+D++AI+S+G  + DG  Y L+G K +L++  +   + +         EG      +  
Sbjct: 135 GSDVSAISSKG--VKDGEEYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTT 192

Query: 261 LLEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--- 311
            L +  P       GL      +K+G +   T EL        ++ DL +    V     
Sbjct: 193 FLVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDDLRIPANRVLGGTT 244

Query: 312 ----MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
                +++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++
Sbjct: 245 GRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEM 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG 
Sbjct: 305 ATKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGY 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           G+ +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 358 GFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|302547333|ref|ZP_07299675.1| butyryl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464951|gb|EFL28044.1| butyryl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 389

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 11/251 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +    + + ++E   G+    +T++  +  D        +W      +D +++ A++
Sbjct: 117 PVIRGDATMAVAISEPDAGSAATDMTTRAVRDGDSYRVSGSKRWISGGGHADQYLLYARL 176

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               G   +  L+ D    G+ Y   +  +G R   + ++ F +       +L V  G  
Sbjct: 177 ADVPGARGIGALVVDADTPGISYGAQEKLMGFRGIPSCDIHFDDVR-VPAANLLVDAGRF 235

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            ++     L  L +A MS++  + ++   + Y + R   G  LI+    +  +AD+ L +
Sbjct: 236 RELFTGFSLERLGNATMSLALAQAAVDRTVDYVQTRTAFGKPLIEFQATQLTLADMVLQV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A           E + A+  A  T       A  V   A++  GG+GY E
Sbjct: 296 EAARLLVYRAARGAGRGLPSPLEVSLAKCTANET-------AKRVTDLAIQLHGGNGYTE 348

Query: 427 ERSIARHYRES 437
           E  I R +R++
Sbjct: 349 EYGIERLHRDA 359


>gi|302767660|ref|XP_002967250.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii]
 gi|300165241|gb|EFJ31849.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii]
          Length = 373

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 158/392 (40%), Gaps = 69/392 (17%)

Query: 89  PGGERWDKVEFHPAWHALLRRSI---HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P   +WD+ ++ P    +LR++      G+ C+      E V   + +++  A ++    
Sbjct: 9   PNAAQWDRDKYFPV--EVLRKAAGLGFGGMFCA------EDVGGSRLNRVDGAVIF--EA 58

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD-----WAPKIFSREYDPTNKAPMQKTSVAIGL 200
           L  G + + +  +   +      R   D     W PK+   E   +              
Sbjct: 59  LAYGDVSTTAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQMELFSS-------------Y 105

Query: 201 GLTEKRGGTDIAAI---------TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE 250
            LTE   G+D A++         T+  Q      Y L+G K F+S   +SD ++++A+  
Sbjct: 106 CLTEPSSGSDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART- 164

Query: 251 GRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL 298
           G +G     CF    LLE G P GL + R ++K+G RS  T       V +  +N  G  
Sbjct: 165 GALGPKGISCF----LLEKGMP-GLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGRE 219

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                ++   ++  +I I    A  S  G +  L  A  YA  R   G  + +    +  
Sbjct: 220 GQGFAIAMAGLDGGRINI----ASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFK 275

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + A+  +    A + D    +      A   A + K +       +  +A++ 
Sbjct: 276 LADMQTALHASRLMVSNAAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQL 329

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+++  + R+ R+   ++IL G+   M
Sbjct: 330 HGGYGYLKDYPVERYLRDLRVHTILEGTNEIM 361


>gi|294629484|ref|ZP_06708044.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832817|gb|EFF91166.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + W PK+ + E             +    GLTE  GG+D  A  +  +  
Sbjct: 98  IHLFGTEEQKRQWLPKLCAGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144

Query: 222 SD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            + G + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 145 EESGEWVINGAKCFITNSGTDITGLVTVTAVTGRKSDGRPLISSIIVP----SGTP-GFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+     G  + ++IL   D   ++++ +
Sbjct: 200 VAPAYSKVGWNASDTRELSFQDVRVPAANLLGEQG--RGYAQFLRIL---DEGRIAIAAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD+ +      A + RLA  + +A
Sbjct: 255 ATGLAQGCVDESVKYAKERHAFGKPIGANQAIQFKIADMEMK-----AHTSRLA--WRDA 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R       +  A + K +   +A     +A +  GG G++ E  +AR +R+S    + 
Sbjct: 308 AYRLVAGEPFKKEAALAKLYSSTIAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILE 365

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 366 IGEGTSEVQRMLIARELG 383


>gi|226361430|ref|YP_002779208.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239915|dbj|BAH50263.1| putative glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 25/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++ A + +  ++  D  + L+G K W  +  ++D  ++ A
Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTNAKRDGDD-WILNGTKMWITNGSVADVAVVWA 182

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + +  +  F+VP         G     +K+K+  R++ T EL   +       +L +   
Sbjct: 183 RTDDGIRGFVVPT-----DTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKG 237

Query: 305 STGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +GP+    + +  I   +    +   R  L  AI YA+ R V    L    + +  IAD
Sbjct: 238 LSGPLGCLNEARFGIIFGA----MGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL++     L++ L    D  ++RSE+ +  ++          + A A+  E    +G 
Sbjct: 294 MALEVGKGHLLAYHLGRLKDRGEARSEQVSTGKLNN-------VREAIAIARECRTILGA 346

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 347 NGITLEYPVIRH 358


>gi|330822830|ref|YP_004386133.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308202|gb|AEB82617.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 127/276 (46%), Gaps = 25/276 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     V + +G++E+  G+D++++ ++ ++  D  Y +SG K W  +   +D   +L 
Sbjct: 112 APAIAGDVVVSIGVSEQGAGSDVSSLKTRARRDGDD-YVISGSKMWITNGTQADWICLLC 170

Query: 248 Q-----VEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
                 V       +VP L E+G    G+  Q++K K G  S+ T ++ F          
Sbjct: 171 NTSDGPVHKNKSLIVVP-LKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHR 228

Query: 299 LGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +G+  +  G +  MK      LD A   ++ + + + E   Y R+R   G  L+D   ++
Sbjct: 229 IGEEGM--GFIYQMKQFQEERLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQ 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  ++ A  +L++R   ++   +   E A+ A++ A        ++   +    M
Sbjct: 286 YKLAELKTELEALRSLTYRATLAYVNGEDVIELASMAKLKA-------GRLGREIADWCM 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +  GG GY  +  ++R YR+    SI  G+   M++
Sbjct: 339 QFQGGMGYTWDNRVSRAYRDYRLGSIGGGADEVMMM 374


>gi|330808408|ref|YP_004352870.1| isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376516|gb|AEA67866.1| Putative isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253
           +G++E   G+D+A + +  +K  D  Y ++G K W  ++P +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNAPSADFICLLANTSDDKPHVNK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +VP      SP G+   +  +K+G RS+ T ++ F +        +    G    M+
Sbjct: 182 SLIMVPMH----SP-GISLGQHLDKLGMRSSETAQVFFDDVRVPQRNRIG-QEGAGFMMQ 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +L + +  +   + M   L   I     Y + R   G  LID  V+   +A++A +I   
Sbjct: 236 MLQFQEERLFGAANMLKGLEHCIDSTIAYCKERKTFGTALIDNQVIHFRLAELASEIECL 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL ++    +   +  +  A+ A++ A        ++A       ++  GG G++ +  
Sbjct: 296 RALVYQATEQYINGQDVTRLASMAKLKAG-------RLARETTDSCLQYWGGMGFMWDNP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           +AR YR+    SI  G+   M+  +  L+
Sbjct: 349 VARAYRDVRLVSIGAGADEIMLGIICKLM 377


>gi|260429276|ref|ZP_05783253.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260419899|gb|EEX13152.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 437

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 38/307 (12%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + S + +  TP   + + PK+ S  +  T             + LTE   G+D++ I  +
Sbjct: 125 AVSTLLVHGTPAQQETYIPKLASGAWLST-------------MCLTEAGAGSDLSRIRCR 171

Query: 218 GQKISDG-IYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGC----------FLVPRLLEDG 265
              + DG  + + G K F+S    D +  +L  V  R G           FL P    DG
Sbjct: 172 --AVRDGESWRIEGQKIFISGGDQDLSEGILHLVLARTGAPEDGVKGLSLFLCPSD-SDG 228

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +   R++ K+G  ++ T ++EF      L+G        +  M     LD ++  V
Sbjct: 229 VRNAITVTRIEEKLGLHASPTCQMEFDGASAELVGAEGRGLAAMFTMMNHARLDVSLQGV 288

Query: 326 SGMRVSLAEAI------HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +    + A A          R+   S  +L D P ++R +A+       A A+       
Sbjct: 289 AHAARAHAIAAAYAAERRQGRQPDGSDAMLADHPDVQRMLAEQQDAARVARAMCHIALGE 348

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +    R +  A    + P+ K WC +         ++ +GG GY+EE  +A+ +R++  
Sbjct: 349 LE----RGDAPALVEFLTPLCKIWCTEAGLRAADLGIQILGGYGYLEEYGVAQIWRDARI 404

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 405 TTIYEGA 411


>gi|149914567|ref|ZP_01903097.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149811360|gb|EDM71195.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 39/282 (13%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N  P QK     GL          ++E   G+D+ ++  + +K +D  Y L+G K W  +
Sbjct: 106 NGTPEQKEKYLPGLVSGAHVGALAMSEAGAGSDVVSMKLRAEKRNDH-YKLNGTKYWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
            P +D  ++ A+ +   G   +   L + +  G       +K+G R + T EL F +   
Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVEV 224

Query: 295 -FGFLLGDLN-----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            F  +LG+       + +G   +  +L  + + IM+       L E + Y   R   G  
Sbjct: 225 PFENVLGEEGRGVRVLMSGLDYERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGQP 279

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC--- 405
           +    +M+  IAD+   + +A A  + +A + D      ++AA            CC   
Sbjct: 280 IGSFQLMQGKIADMYTAMNSARAYVYEVAKACDRGDVTRQDAAA-----------CCLYA 328

Query: 406 -KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + A     +A++ +GG+G++ +  +AR +R++    I  G+
Sbjct: 329 SEQAMVQAHQAVQAMGGAGFLADAPVARLFRDAKLMEIGAGT 370


>gi|315043194|ref|XP_003170973.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311344762|gb|EFR03965.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 435

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + +    G    + + K+G R+++T  L F +       LLG+        +  K  I 
Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288

Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            L+   + ++     LA       A +    R   G ++     M+  +A    +IAAA 
Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL F  A   +  +   ++AA A++       +  ++A  V + A+E +GG G++ E   
Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSSLAVEWMGGMGFVREGIA 401

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R+S   +I  G+ N  +  +   L+K
Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|311029703|ref|ZP_07707793.1| Acyl-CoA dehydrogenase type 2 domain protein [Bacillus sp. m3-13]
          Length = 388

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 30/231 (12%)

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRL 275
           +K S+G + ++G K F S +P+ D FI+ A VEG   VG FL+PR L+     G+  +  
Sbjct: 148 KKHSNGGWVINGRKNFTSLAPVLDYFIISASVEGTEDVGEFLLPRELK-----GISIEET 202

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVST--GPVEDMKIL----IYLDSAIMSVSGMR 329
            N +  R+  + +L  S         L +     P     +L     YL  AI +     
Sbjct: 203 WNSMSMRATRSDDLVLSEVMASKEALLYIKKKKSPKPQGWLLHIPACYLGIAI-AARNEA 261

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388
           VS A++ H     H     + + P ++  +A + +++ AA  L + +A  +DE   + + 
Sbjct: 262 VSFADSYHPNSLPHP----IREVPKVRERVAKMDVELTAARHLLYSVARLWDEEPDKRDK 317

Query: 389 ---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              E A A+++A          A +++ EAM  +G      E  + RHYR+
Sbjct: 318 LIGELATAKLVA-------TNSAISIVDEAMRIVGAQSLHAEHPLQRHYRD 361


>gi|307320351|ref|ZP_07599769.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306894073|gb|EFN24841.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 380

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 18/272 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+    V     LTE   G+D AA+ ++  +  D  Y L+G K F+S        ++   
Sbjct: 112 PLLTMDVLASYCLTEPGSGSDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMAR 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302
            G  G   +   + +    GL +   + K+G  +  T       V +   N  G      
Sbjct: 171 TGEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGF 230

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   ++  ++ I    A  S+ G + +  +A+ Y + R   G  + +   ++  +AD+
Sbjct: 231 RIAMAGLDGGRLNI----AAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+  A    +R A + D A   + +      +  + K +      +V  +A++  GG 
Sbjct: 287 ATDLEVARTFLWRAACALDAADPEATK------LCAMAKRFVTDRCFSVANDALQLHGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           GY+ +  + +  R+   + IL G+   M L V
Sbjct: 341 GYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372


>gi|302343818|ref|YP_003808347.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301640431|gb|ADK85753.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D +AI ++ +K  D  Y L+G K W  +   +  + ++A  +   G    
Sbjct: 122 FALTESAAGSDASAIRTEARKEGDH-YVLNGSKQWITNGGHAGIYTVIAITDRTKGPRGA 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    + ++K+G R++AT EL F++    +  D  +S    E M  +  +
Sbjct: 181 SAFIVEADDEGFSVGKKESKLGIRASATAELIFNDC--RIPADRLLSR---EGMGFVAAM 235

Query: 319 DSAIMSVSGM--------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +  +S  G+        + +L EA  +AR R      +I    +   +AD+A  + AA 
Sbjct: 236 RTFDLSRPGVGAQGVGVAQGALDEAAAFARTRRQFDKPIITFQAVAHMLADMATKVEAAR 295

Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           AL + +A   D  AK  S+ +A A++       +   +A  V   A++ +GG GY+ E  
Sbjct: 296 ALVYCVARHIDSGAKDISKVSAMAKV-------FPTDVAMEVTTNAVQVMGGHGYMREYP 348

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 349 VEKMMRDAKILQIYEGT 365


>gi|186474945|ref|YP_001856415.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191404|gb|ACC69369.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 376

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE + G+D +A+ +   +  DG Y L+G K F++S  + +  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDG-YMLNGVKQFITSGKNGNVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      F+VP         G    RL+ K+G  S+ T ++ F N       L+G
Sbjct: 170 TDKNAGKRGISAFIVPT-----ETPGYLVARLEEKLGQHSSDTAQIVFDNCRVPAANLIG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 SEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQALFSHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L +  A+  D  +    EAA A++ A        + A  + + A+
Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365


>gi|50084590|ref|YP_046100.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530566|emb|CAG68278.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 434

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y LSG K   +    +D  ++ A ++G+   F+V R       +     +    +G ++ 
Sbjct: 227 YFLSGEKTLVILGESADLILVTAMLDGQPEVFIVER-------DPTISIKSAPAMGLKAA 279

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T+ L F +T   LLGD +       D+  L++   A+ +   ++   +  I YA  R  
Sbjct: 280 QTMSLYFDHTPAVLLGDNDFDYSAFIDLGSLMWCAMAVGTCEAVK---SYCIAYANDRTA 336

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L +  A+  +  ++   EA  AR++       C
Sbjct: 337 FGEPISHRQSVAFMIADMAIEIDAMRMLIWNAASLAEAGQAFHREAYLARLL-------C 389

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 390 AEKSMRIGTDGVQLLGGHGFTKEHPVERWYRDLRATAIL 428


>gi|3212539|pdb|1IVH|A Chain A, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212540|pdb|1IVH|B Chain B, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212541|pdb|1IVH|C Chain C, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212542|pdb|1IVH|D Chain D, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
          Length = 394

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 118 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 162

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 163 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 219

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 220 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 275 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 333

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 334 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 380


>gi|322503093|emb|CBZ38177.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 412

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 46/348 (13%)

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170
           +PVV K+A       +   A LE G +                P+V+    V       +
Sbjct: 58  DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++A     R+Y P     + K +V     LTE   G+D  A+ ++ +K     + ++G
Sbjct: 118 FFNFANDAQRRKYLPK----LAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K ++++   +  F+++A V+   G     CF+V    +     G+   R +NK+G R++
Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETPGVSVVRTENKLGIRAS 227

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338
           +T EL   N     + + NV     +  KI I  L+   + +    + +A+      + Y
Sbjct: 228 STAELRLENV---EVPEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G  + D   M+   A+ A+++ AA  + +  +      +   ++AA A     
Sbjct: 285 LFQRKQFGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             KY+   +A    + A+E  GG G++++  + R YR++   +I  G+
Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385


>gi|311103339|ref|YP_003976192.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758028|gb|ADP13477.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 392

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG +N        +K+L
Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNAG------VKVL 240

Query: 316 IY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     +SG  V + +A+      Y   R   G  + +  +++  +AD+   + A+
Sbjct: 241 MSGLDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTLQAS 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  +++  + D  +  +E     R        +  + A  +  E ++ +GG+GYI E  
Sbjct: 301 RAFCYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYP 358

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 359 VGRLWRDAKLYEIGAGT 375


>gi|296479444|gb|DAA21559.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 416

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +   +  D  Y L+G K F+S    +D ++++ +  G     + C 
Sbjct: 161 LTEPGSGSDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCV 219

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F +              GFL+    +
Sbjct: 220 VV----EKGTP-GLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGL 274

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+  A  Y + R   G  L +   ++  +AD+A 
Sbjct: 275 NGGRI---------NVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAA 325

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L  R A     A +  EE   A ++  + K +      A+  +A++  GG GY
Sbjct: 326 RLVASR-LMIRTA-----ATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGY 379

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 380 LKDYAVQQYVRDSRVHQILEGSNEVM 405


>gi|296126580|ref|YP_003633832.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
 gi|296018396|gb|ADG71633.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
          Length = 381

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 40/266 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
            GLTE   GTD A    Q   + D     + L+G K F++ S  ++ +++ A  +   G 
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDEAAQEWVLNGSKIFITNSGYANVYVIFAMTDKSKGL 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +   + + +  G    + + K+G R +AT EL F N       LLG+L       +  
Sbjct: 181 KGISAFIVESTAPGFSIGKKEKKLGIRGSATCELIFENARIPKDNLLGELG------KGF 234

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           KI      A+M++ G R+ +A            E + Y + R   G  + +    +  +A
Sbjct: 235 KI------AMMTLDGGRIGIASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ + + A+  L ++ A         S +AA A++ A  T       A  V  +A++  G
Sbjct: 289 NLEVKVEASRLLVYKAAWRESNHLPYSVDAARAKLFASET-------AMEVTTKAVQLHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E  + R  R++    I  G+
Sbjct: 342 GYGYTREYPVERMMRDAKITEIYEGT 367


>gi|313126784|ref|YP_004037054.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312293149|gb|ADQ67609.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 380

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 33/276 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     G  LTE   G+D + + +  +K  D  + + G K F+++      +++  V
Sbjct: 113 PLAEGEYLGGWALTEPSSGSDASDMDTTAEKDGD-EWVIDGSKQFITNANVAGSVLVKAV 171

Query: 250 ----EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
               EG  G   F+V    +DG      +    +K+G   + T EL F         LLG
Sbjct: 172 TDPGEGYDGISTFIVDPEEDDGFEVTTVW----DKMGLNCSPTCELAFDEVRIPEDRLLG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAI 359
           +     G  + MK L   D   +S++ +   LA+  + A + +        +P+ K  AI
Sbjct: 228 EEGA--GWKQTMKTL---DGGRISIAALSTGLAQGAYEAAKTYAGDREQFGKPISKFDAI 282

Query: 360 ADIALDIAAATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            D  +D+   T     L+ + A  +D  +S S E+A A++ A        + A  V  +A
Sbjct: 283 RDKLVDMHRKTERARLLTHKAATRYDAGESVSRESALAKLDA-------SEAAREVAEDA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY E+ +  R YR+  A  + +G G + +
Sbjct: 336 VQVLGGYGYTEDFAPQRFYRD--AKLMEIGEGTSEI 369


>gi|167746635|ref|ZP_02418762.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662]
 gi|317471462|ref|ZP_07930814.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167653595|gb|EDR97724.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662]
 gi|316901077|gb|EFV23039.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 378

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 20/263 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  A T+   K  D  Y L+G K F+++  ++  + + A  +   G   +  
Sbjct: 123 LTEPGAGSDAGAGTTTAVKDGDE-YILNGRKCFITNGGIASFYCITAMTDKSKGVKGISM 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313
            L D    GL     ++K+G R++ T ++          N  G       ++   ++  +
Sbjct: 182 FLVDAGTPGLSTGNEEDKMGIRTSNTCDVVLEDCRIPAKNLIGAEGKGFGIAMKTLDQAR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             +   +A ++  G+     EAI Y + R   G  +I    ++  IAD+A+    A  + 
Sbjct: 242 AWMGCVAAGIAQRGIN----EAIAYGKERIQFGKPIIKNQALQFKIADMAIKTETARQMV 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D   S S+EAA       I K +   +A  V +EA++  GG GY  E  + + 
Sbjct: 298 AHALTRMDLGLSHSKEAA-------IAKCYASDIAMEVASEAIQMFGGYGYSREYPVEKL 350

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R++    I  GS     + + N
Sbjct: 351 LRDAKIFQIFEGSNEIQRIVIAN 373


>gi|330898843|gb|EGH30262.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 335

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 31/209 (14%)

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P ++  +M  ++   TP     +  K+ S E+  T             + LTE   GT
Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258
           D+  + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+V
Sbjct: 173 DLGMLLTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L       G  N +    +++K+G   NAT  + F    G+L+G  N     +    
Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
               L +A+  ++   V+    + YAR R
Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDR 321


>gi|332717081|ref|YP_004444547.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325063766|gb|ADY67456.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 395

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 39/289 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITS 216
           SM+++ ++  +H      IF+   D   K   P   +   IG  GLTE   G+D   + +
Sbjct: 99  SMMSVQSSLVIHP-----IFAYGSDEQKKKYLPGLVSGELIGCFGLTEPDAGSDPGGMKT 153

Query: 217 QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCY 272
           + +KI+ G Y L G K W  ++P++D F++ A+ E    ++  F++ + ++     GL  
Sbjct: 154 RAEKIAGG-YRLRGSKMWISNAPIADVFVVWAKSEAHDNQIRGFVLEKGMK-----GLSA 207

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  K+  R++ T E+           LL +++   GP         L+ A   +S   
Sbjct: 208 PKIGGKLSLRASITGEIVMDGVEVGEDALLPNVSGLKGP------FGCLNRARYGISWGV 261

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  AE     A+ Y   R   G  L    + ++ +AD+  +IA     S R+    DE K
Sbjct: 262 MGAAEDCWFRALQYGLDRKQFGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHK 321

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              E       M  I K   C  A  +  +A +  GG+G   E  + RH
Sbjct: 322 MAPE-------MISIIKRNNCGKALDIARQARDMHGGNGIQIEYHVMRH 363


>gi|260558129|ref|ZP_05830339.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408402|gb|EEX01710.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        +++  V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLSREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|117621521|ref|YP_855791.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562928|gb|ABK39876.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 391

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ S+ +++ DG Y L+G+K W  +SP++D F++ A+++G +  F  
Sbjct: 136 FGLTEPDAGSDPGSMKSRAERV-DGGYLLTGNKMWITNSPIADLFVVWAKLDGEITGF-- 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ K   R++ T E+     F      L  ++   GP   +   
Sbjct: 193 --VLEKGMA-GLSAPKIEGKFSLRASITGEIVMERVFVPEANRLAGVSGLKGPFGCLNKA 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  ++         A  Y   R   G  L    + +  +A++  +IA       +
Sbjct: 250 RY-GIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKLANMQTEIALGLQGCLQ 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                DE +   E       +  + K   C  A  +   A +  GG+G  +E  + RH
Sbjct: 309 AGRLMDEGRCPVE-------LVSLIKRNSCGKALEIARVARDMHGGNGISDEFHVIRH 359


>gi|149692066|ref|XP_001503597.1| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) [Equus caballus]
          Length = 426

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------G 251
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+ +        
Sbjct: 165 LAMSEPNAGSDVVSMKLKAEKKGDH-YILNGNKFWITNGPDADILIVYAKTDLAAVPPSR 223

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F+V + +      G    +  +K+G R + T EL F +     +   N+   P + 
Sbjct: 224 GITAFIVEKDMP-----GFSTSKKLDKLGMRGSNTCELIFEDC---KVPATNILGHPSKG 275

Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + +L+  LD   + ++G     M+  L  +I Y   R   G  +    +M+  +AD+   
Sbjct: 276 VYVLMSGLDLERLVLAGGPLGLMQAVLDHSIPYLHTREAFGQKIGHFQLMQGKMADMYTR 335

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A     + +A + DE    S++ A   +       +  + A  V  + ++C G +GYI
Sbjct: 336 LMACRQYVYNVAKACDEGHCTSKDCAGVIL-------YSAECATQVALDGIQCFGANGYI 388

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +  + R  R++    I  G+G + V
Sbjct: 389 NDFPMGRFLRDAKLYEI--GAGTSEV 412


>gi|119898215|ref|YP_933428.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670628|emb|CAL94541.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 395

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D  ++ ++ +K+  G Y +SG K W  +
Sbjct: 116 FGTEAQKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMITRAKKVPGG-YSISGAKMWITN 174

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  EG +  F    +LE G   GL    +  K+G R++ T E+     F
Sbjct: 175 SPIADVFVVWAKDDEGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
                    +    GP         L+SA   ++   +  AEA +     Y   R   G 
Sbjct: 230 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 283

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I        ++    D   +  E       +  I K   C  
Sbjct: 284 PLAANQLVQKKLADMLTEITLGLQACLQVGRLKDAGNAPVE-------ITSIIKRNSCGK 336

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  +ARH
Sbjct: 337 ALDIARTARDMLGGNGISDEFCVARH 362


>gi|289673864|ref|ZP_06494754.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|149926059|ref|ZP_01914322.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149825347|gb|EDM84558.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 56/378 (14%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL-M 152
           W+K +  PA H L ++  + GL        F  +    ++ + AA+   + ++  G + M
Sbjct: 29  WEKEQMFPA-HELFKKMGNLGLLGLTKPEEFGGMGLDYSYSVVAAQA--LGKIHCGGVPM 85

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +  V +      M TP + + +      RE+     AP     +   +G++E   G+D+A
Sbjct: 86  AIGVQTD-----MATPALAR-FGSDELRREF----LAPAIAGDMVACIGVSEPGAGSDVA 135

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGR----VGCFLVPRLLEDG 265
            + +  +K  DG  Y ++G K W  +S  +D   +LA   EG+        +VP      
Sbjct: 136 GVKTTAKK--DGSDYIINGSKMWITNSLQADWICLLANTSEGKPHQNKSLIIVPM----- 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMK 313
              G+  ++  +KIG  ++ T  + F N              GF+   +           
Sbjct: 189 KTPGITIEKKIHKIGMWASDTGLIHFDNVRVPQRNLIGMEGAGFMYQMIQFQEE------ 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  S+ GM   L E I+Y R+R++ G  ++DQ V+   +A++  +I A  AL 
Sbjct: 243 ---RLWGAANSIEGMMHVLNETINYTRQRNLFGSTVLDQQVVHFTLAELKTEIEALRALV 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++    +      +E       +A + K    ++   V  + ++  GG G+  E   ++ 
Sbjct: 300 WQATEEYVAGGEVTE-------LASMCKLKSGRLVREVADKCLQFWGGMGFTWENPASQL 352

Query: 434 YRESPANSILLGSGNAMV 451
           YR+    SI  G+   M+
Sbjct: 353 YRDGRLISIGGGADEVML 370


>gi|186682449|ref|YP_001865645.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
 gi|186464901|gb|ACC80702.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
          Length = 1284

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 21/187 (11%)

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG LN      +D  +   L   +MS+ GM+      + Y+ RR VS G L++ P+   
Sbjct: 816 LLGTLNNGMEVAQDAMMHGRLIIGVMSLGGMKRCAQLMLRYSSRRSVSTGRLLNNPISLV 875

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA-- 415
            ++D+   I +   L F++A+  D+ ++  +EA  A          C    P ++ +A  
Sbjct: 876 WLSDLTAAITSLETLLFKIADLLDQGRAIPQEAFTA----------CKTAGPELVWQAAD 925

Query: 416 --MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFST 471
             ++ +GG GYIE     +  R++    I  G       + LN+    +  N   +L   
Sbjct: 926 RLVQMLGGRGYIETNIAPQILRDARLFRIFEGP-----TETLNMFLGSRAMNQSAELHRF 980

Query: 472 LEQDLGS 478
           L ++LG+
Sbjct: 981 LSEELGA 987


>gi|254497994|ref|ZP_05110757.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254352771|gb|EET11543.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 381

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 37/290 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A++ +  +K+ DG + L+G K W  ++P++D  I+ A
Sbjct: 114 PGMATGEIIGCFGLTEPDAGSDPASMRTNAKKV-DGGWRLNGAKMWITNAPIADIAIVWA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  +  F+V     D    G+    +K K+  R++ T EL F N F   + D N+  G
Sbjct: 173 KTDAGIRGFIV-----DTKSEGVRCPEIKLKMSLRASITGELVFDNVF---VRDENLLPG 224

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-----EAI-------HYARRRHVSGGILIDQPVM 355
             +       L +A+  +S  R  +A      AI       +Y   R      L    ++
Sbjct: 225 SEKG------LGAALSCLSQARYGIAWGAIGAAIECFDITSNYLLERKQFDKPLASFQII 278

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +I  A  L+  +    DE +           M  + K   C+ A  +  + 
Sbjct: 279 QKDLADMYTEIIKAQCLNLHVGRLKDEKRETP-------TMISLVKGNSCREALKIARKC 331

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
              +GG+G   E  + RH     +     G+ N   L VL     G N F
Sbjct: 332 RNLLGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLGKHITGINAF 380


>gi|217076822|ref|YP_002334538.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus
           TCF52B]
 gi|217036675|gb|ACJ75197.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus
           TCF52B]
          Length = 379

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D +  ++   K  +  + ++G K F+++  ++D +I+ A     +G   +
Sbjct: 123 FALTEPNAGSDASNQSTYAVKDGNN-WIINGTKIFITNGGVADIYIIFASTNKELGAKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G    +++ K+G R +AT EL   N    ++   N+     +  KI L  
Sbjct: 182 SAFIVERDTPGFSIGKIEEKMGIRGSATAELILDNV---VVPGENLLGKEGQGFKIALKT 238

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +A     E + Y ++R   G  +     ++  IA++   I AA  L
Sbjct: 239 LDGGRIGIAAQALGIAQGAFDETVKYIKQREQFGRPIAKFQSVQFMIAEMKTKIEAARCL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A    ++   S EAA A       KY+   +A  V   A++  GG GY +E  + R
Sbjct: 299 VYNAALKKMKSSDYSLEAAMA-------KYYASDVAMEVTRMAVQLHGGYGYTKEYPVER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 352 MMRDAKITEIYEGT 365


>gi|193078422|gb|ABO13408.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        +++  V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKAG-------RLSREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|152987091|ref|YP_001347637.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150962249|gb|ABR84274.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 14/264 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++   +  G+      +K+G RS+ T ++ F N        +  + G    M++L + 
Sbjct: 182 SLIIVPMNTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 240

Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +      + G+   +   I Y + R   G  LID  V+   +A++  ++ A  AL +
Sbjct: 241 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  ++R Y
Sbjct: 301 QATELYVKGRDVTRLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVSRAY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++   SI  G+   M+  +  L+
Sbjct: 354 RDTRLVSIGGGADEIMLGIICKLM 377


>gi|72162178|ref|YP_289835.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915910|gb|AAZ55812.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 383

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 33/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVG 254
            GLTE   G+D A+++ +  +  D  Y L+G K F+++   +D  I+ A+  G     + 
Sbjct: 123 FGLTEPDTGSDAASLSLKAVRDGDD-YVLTGSKMFITNGTWADVAIIFARTGGPGPKGIT 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVED 311
            FLVP         GL    +  K+G R   T +L   E       +LG+ N      + 
Sbjct: 182 AFLVPT-----DTPGLTRTTIHGKLGLRGQPTAQLFLDEVRVGPDAILGEEN------QG 230

Query: 312 MKI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +I +  LD         +V   R +L  A+ +A+ R   G  +    +++  +AD+A++
Sbjct: 231 FRIAMAALDKGRVSVAAGAVGAARGALESALAHAKERVQFGRPIAGFQLVQEMLADMAVE 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +R A+  D  +  S  A+ A++ A  T              AM+  GG GYI
Sbjct: 291 TDAARLLVWRAADLIDRGEPFSTAASMAKLYATETAVRAAN-------NAMQVFGGYGYI 343

Query: 426 EERSIARHYRESPANSILLGS 446
           +E    ++ R++   ++  G+
Sbjct: 344 DEYPPGKYLRDARVTTLYEGT 364


>gi|70730158|ref|YP_259897.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|4582976|gb|AAD24879.1|AF081920_2 putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68344457|gb|AAY92063.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 380

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 24/288 (8%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    +D  PK+ S E+  +N              +TE   G+D + + S+    +DG
Sbjct: 101 FATAETKRDVLPKLASGEFIGSNA-------------ITEPEAGSDSSNLKSRAWPQADG 147

Query: 225 IYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L GHK F  ++P++D F+  A  +   G   V   +   S  GL      +K+  RS
Sbjct: 148 SYRLDGHKSFAGNAPIADIFVTYATTQPEYGALGVSGFIVHRSSAGLRVSEPLDKVCLRS 207

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYAR 340
               E+ F +     +  L       +  +  +  + A +    +  M   L + I +AR
Sbjct: 208 CPAGEVFFDDCRVPEVNRLGEEGQGRQVFQSSMGWERACLFAAFLGMMERQLEQTIEHAR 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D   +   IA + L + +A  L FR     D+           ++   ++
Sbjct: 268 TRRQFGKPIGDNQAVSHRIAQMKLRLESARLLLFRACWGMDQGDP-------GQLNIALS 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           K    + A A   +A+   GG G +E   I    R+S   +I  G+ +
Sbjct: 321 KLAISEGALASSIDAVRIFGGRGCLESFGIEAMLRDSIGTTIFSGTSD 368


>gi|30923365|sp|Q9D7B6|ACAD8_MOUSE RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8;
           Short=ACAD-8; Flags: Precursor
 gi|23337095|gb|AAH37644.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Mus musculus]
          Length = 413

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 31/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G     +   
Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRTGGSGAKGISCI 216

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++E G+P GL + + + K+G  S  T  + F +              GFL+    ++ G 
Sbjct: 217 VVEKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGR 275

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +         + A  S+     S+     + + R   G  L     ++  +AD+A  + A
Sbjct: 276 I---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVA 326

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L  R A     A +  EE   A  +  + K +  +   A+  +A++  GG GY+++ 
Sbjct: 327 SR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDY 380

Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           ++ ++ R+S  + IL GS   M +L   NLL+
Sbjct: 381 AVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 412


>gi|16265193|ref|NP_437985.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307308820|ref|ZP_07588508.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15141333|emb|CAC49845.1| acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306900625|gb|EFN31237.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 380

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 18/272 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+    V     LTE   G+D AA+ ++  +  D  Y L+G K F+S        ++   
Sbjct: 112 PLLTMDVLASYCLTEPGSGSDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMAR 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302
            G  G   +   + +    GL +   + K+G  +  T       V +   N  G      
Sbjct: 171 TGEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGF 230

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   ++  ++ I    A  S+ G + +  +A+ Y + R   G  + +   ++  +AD+
Sbjct: 231 RIAMAGLDGGRLSI----AAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+  A    +R A + D A   + +      +  + K +      +V  +A++  GG 
Sbjct: 287 ATDLEIARTFLWRAACALDAADPEATK------LCAMAKRFVTDRCFSVANDALQLHGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           GY+ +  + +  R+   + IL G+   M L V
Sbjct: 341 GYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372


>gi|71665289|ref|XP_819616.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70884925|gb|EAN97765.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259
           +TE   G+D+AAI +  +K  D  Y ++G K W  +  +++ + +LA   EG +G F+V 
Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318
               D +  G+   + +  +G R + T  + F +    ++ + NV   P +  KI +   
Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259

Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  AI +V+  + ++ EA  YA +R   G  + +   +   +AD+A  I AA  L+
Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ +S +  A+ A++ A      C       +  A++  GG+G+     + + 
Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372

Query: 434 YRESPANSILLGS 446
           YR++   SI  G+
Sbjct: 373 YRDAKIFSIYEGT 385


>gi|324503419|gb|ADY41489.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 366

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+AAI ++ +K  D  Y ++G K W      +  F +LA+ E       G+ 
Sbjct: 100 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYATWFFVLARTETDPKTPAGQA 158

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +    ++   NV   P    
Sbjct: 159 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 210

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D+    V+   V LA     EA  YA  R   G  +     +   +AD+A+++
Sbjct: 211 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 270

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +++R A   D      E ++Y    A I K +    A    A A++ +GG+G+  
Sbjct: 271 ELARLVTYRAAVDVD----NKERSSY---YASIAKCFAADTANITAANAVQILGGNGFNS 323

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 324 EYPVEKLMRDAKIYQIYEGT 343


>gi|304392162|ref|ZP_07374104.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130]
 gi|303296391|gb|EFL90749.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130]
          Length = 390

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 123/254 (48%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  ++P ++  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKFWITNAPQANTLIVYAKTDPDAGPKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 190 TAFLIEKEFEGFSIAQKLDKMGMRGSETGELVFQDCEVPEENILGELN---GGVKVLMSG 246

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +  M+ ++   + Y   R   G  + +  +++  +AD+ + + AA A 
Sbjct: 247 LDYERAVLAAGPIGIMQAAMDIVLPYIHERQQFGKSIGEFQLVQGKVADMYVSMNAARAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  E+AA A + A        + A  V  +A++ +GG+GYI + +  R
Sbjct: 307 VYAVAKACDRGETTREDAAGAILFA-------AERATQVALDAIQLLGGNGYINDYATGR 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 LLRDAKLYEIGAGT 373


>gi|256392406|ref|YP_003113970.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256358632|gb|ACU72129.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 386

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251
           + +TE   G+D+A I +  +   DG  Y L+G K F++   ++D  +++A+         
Sbjct: 125 IAMTEPGTGSDLAGIKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVVARTAPHDPDNR 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  +   L+ D    G    R   KIG R++ T EL F+        D+ V   PVED
Sbjct: 185 RAGLSI---LVVDTKSEGYVVGRKLEKIGLRTSDTAELSFT--------DVKV---PVED 230

Query: 312 M-----KILIYLDSAIM---------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     K   YL   ++         +V+    ++  AI Y + R V G  +      K 
Sbjct: 231 LLGEEGKAFSYLTHNLIPERLGIAVSAVAAADAAIQFAIGYTKERDVFGTPVASFQNTKF 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A+ + +++A  A+  R  + ++  +    +AA  ++       +  +MA  VI + ++
Sbjct: 291 VLAECSSEVSAGQAMIDRAMDLYEADELSVADAASVKL-------FTTEMAGRVIDKCLQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 344 LHGGYGYMLEFPIAKLYTDNRVFRIYGGTSEVM 376


>gi|312889445|ref|ZP_07748997.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297997|gb|EFQ75114.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 379

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D  +  +    + D  Y L+G K W  +   +  ++++AQ
Sbjct: 113 PLAKGEKIGAFCLSEPEAGSDATSQHTTAIDMGD-YYLLNGTKNWITNGGSASTYLVIAQ 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FG 296
                G   +  L+ +    G      +NK+G R + T  L F++             FG
Sbjct: 172 THAERGHHGINVLIVERGMEGFTVGPKENKLGIRGSDTHSLMFTDVKVPKENRIGEDGFG 231

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           F      +  G        I + +  + ++     L  A+ Y++ R   G  L D   ++
Sbjct: 232 FKFAMKTLEGGR-------IGIAAQALGIASGAYEL--ALQYSKERKTFGKPLADHQSIQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A +I AA  L  + A   D  +S      YA + + + K +  ++A     EA+
Sbjct: 283 FKLADMATEIEAARLLCLKAAWLKDSGQS------YA-LASSMAKLFASEVAMKTTIEAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG G+++E  + R  R++    I  G+
Sbjct: 336 QIHGGYGFVKEYHVERLMRDAKITQIYEGT 365


>gi|319760926|ref|YP_004124863.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115487|gb|ADU97975.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     V + +G++E+  G+D++++ ++ ++  D  Y +SG K W  +   +D   +L 
Sbjct: 112 APAIAGDVVVSIGVSEQGAGSDVSSLKTRARRDGDD-YVISGSKMWITNGTQADWICLLC 170

Query: 248 QV-EGRV---GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
              +G V      +V  L E+G    G+  Q++K K G  S+ T ++ F          +
Sbjct: 171 NTSDGPVHKNKSLIVVPLKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHRI 229

Query: 300 GDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           G+  +  G +  MK      LD A   ++ + + + E   Y R+R   G  L+D   ++ 
Sbjct: 230 GEEGM--GFIYQMKQFQEERLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQY 286

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++  ++ A  +L++R   ++   +   E A+ A++ A        ++   +    M+
Sbjct: 287 KLAELKTELEALRSLTYRATLAYVNGEDVIELASMAKLKA-------GRLGREIADWCMQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             GG GY  +  ++R YR+    SI  G+   M++
Sbjct: 340 FQGGMGYTWDNRVSRAYRDYRLGSIGGGADEVMMM 374


>gi|114656361|ref|XP_001143192.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 6 [Pan
           troglodytes]
          Length = 407

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 131 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 175

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 176 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 232

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +       +LG  N     +     L  L  A   +  M+  L   I Y   
Sbjct: 233 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 292

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   +      
Sbjct: 293 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 346

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  V  + ++C GG+GYI +  + R  R++    I  G+
Sbjct: 347 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 390


>gi|40062479|gb|AAR37431.1| acyl-CoA dehydrogenase [uncultured marine bacterium 105]
          Length = 391

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 41/291 (14%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  +   R Y P      + TS ++G   L+E   G+D  ++T++     DG + L+G K
Sbjct: 111 WGNQDLKRRYLP------RLTSSSVGAYALSESSSGSDAFSLTTRCIP-RDGAFELTGRK 163

Query: 233 -WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  ++  +D F++ A  +       +  F+V R +E     G      ++K+G R+++T
Sbjct: 164 LWITNAAEADIFVVFANAKPESEHRGITAFIVERDME-----GFSIGVKEDKLGIRASST 218

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
            EL           LLG++       +  K+ I  L++  + +    + LA      AI 
Sbjct: 219 CELILDACLVPNSNLLGEIG------QGYKVAIETLNAGRIGIGAQMIGLASGALDHAIA 272

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  + +   ++  +A  A ++ AA    +  A   D       E+A      
Sbjct: 273 YTKERKQFGKPIAEFQGVQFQLAQAATELEAARLTVYNAARLRDGGHKFLTESA------ 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            + K +   +A  V + A++  GG GY+++  + + YR++    I  G+ N
Sbjct: 327 -MCKLFSSNVAEKVTSLAVQLFGGYGYVKDYPVEKLYRDAKIGQIYEGTSN 376


>gi|30584677|gb|AAP36591.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase [synthetic
           construct]
 gi|60654071|gb|AAX29728.1| isovaleryl coenzyme A dehydrogenase [synthetic construct]
          Length = 424

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|21355753|ref|NP_648239.1| CG6638 [Drosophila melanogaster]
 gi|7295072|gb|AAF50398.1| CG6638 [Drosophila melanogaster]
 gi|19528527|gb|AAL90378.1| RE62833p [Drosophila melanogaster]
 gi|220948676|gb|ACL86881.1| CG6638-PA [synthetic construct]
 gi|220958078|gb|ACL91582.1| CG6638-PA [synthetic construct]
          Length = 420

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            L+G K W  +   +D  I+ A+  G        +  F+V    E     G    +  +K
Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327
           +G R ++T EL F         DL V    +   E+  + + +          A   V  
Sbjct: 240 LGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D A +RS
Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGNRS 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +     I+      +  + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403


>gi|116195064|ref|XP_001223344.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88180043|gb|EAQ87511.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 435

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   ++Y      P   T+      L+E   G+D  A+ ++  +   G + +SG K 
Sbjct: 153 WGSESLKKKY-----LPRLATNTVGSFCLSEPVSGSDAFALATKATETESG-FKISGSKM 206

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +S  ++ FI+ A ++   G   +   + D    G    + + K+G ++++T  L F 
Sbjct: 207 WITNSMEAEFFIVFANLDPSKGYRGITAFIVDKDTKGFSIAKKEKKLGIKASSTCVLNFD 266

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
           +       LLG+        +  K  I  L+   + +      LA      A+ Y     
Sbjct: 267 DVEVPKENLLGERG------QGYKYAISLLNEGRIGIGAQMTGLALGAWENAVKYVWNDR 320

Query: 344 VSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITK 401
              G L+ +   M+  IA    +I AA AL +  A        R +EA    +M A + K
Sbjct: 321 KQFGQLVGEFQGMQHQIAQSYTEITAARALVYNAA--------RKKEAGENFVMDAAMAK 372

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 373 LYASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIGAIYEGTSNIQLNTIAKTLQK 431


>gi|328544859|ref|YP_004304968.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414601|gb|ADZ71664.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 18/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  I +  +K  DG  Y ++G K F+++  +++  I++A+ +  +G   
Sbjct: 129 IAMTEPGAGSDLQGIKTTARK--DGNHYVINGSKTFITNGQLANLIIVVAKTDPSLGAKG 186

Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           V  L+ E     G    R  +KIG + N T EL F +       LLG      G  + M+
Sbjct: 187 VSLLVVETDKVEGFRRGRNLDKIGLKGNDTSELFFEDVRVPADALLG-AEEGRGFYQLME 245

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L  A  +++ +  +L   + Y + R   G  ++D    +  +A++  +      
Sbjct: 246 QLPQERLLVACQAMAAIERALTVTLDYVKERKAFGKAILDFQNTQFKLAELKTEATIGRV 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                    ++  +R        + A + KYW   +   V+ E ++  GG GY+ E  IA
Sbjct: 306 F-------VNDCIARHIAGGLDSVTASMAKYWTTDLQCKVMDECLQLHGGYGYMNEYPIA 358

Query: 432 RHYRESPANSILLGSGNAM 450
           R Y ++    I  G+   M
Sbjct: 359 RLYADARVQRIYAGTNEIM 377


>gi|71653384|ref|XP_815330.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70880378|gb|EAN93479.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259
           +TE   G+D+AAI +  +K  D  Y ++G K W  +  +++ + +LA   EG +G F+V 
Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318
               D +  G+   + +  +G R + T  + F +    ++ + NV   P +  KI +   
Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259

Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  AI +V+  + ++ EA  YA +R   G  + +   +   +AD+A  I AA  L+
Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ +S +  A+ A++ A      C       +  A++  GG+G+     + + 
Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372

Query: 434 YRESPANSILLGS 446
           YR++   SI  G+
Sbjct: 373 YRDAKIFSIYEGT 385


>gi|124266967|ref|YP_001020971.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124259742|gb|ABM94736.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 617

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 59/312 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSS---------------- 237
           L+E + G+ +  +T++ +   +G         Y LSGHK ++S                 
Sbjct: 160 LSEPQAGSSLGDVTTRARPDGEGSEHDPLGPRYRLSGHKMWISGGEHELTENIVHLVLAK 219

Query: 238 -PMSDAFIMLAQVEGRVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
            P  D   + A V+G +  F+VP+ L        G  N +    L +K+G R      L 
Sbjct: 220 IPADDG-TLPAGVKG-LSLFIVPKWLVQPGGRLTGERNDVALAGLNHKLGYRGTTNTLLN 277

Query: 291 FSNTF---GFLLGDLNVSTG-PVEDMKILIY----------LDSAIMSVSGMRVSLAEAI 336
           F       G   G +    G P E ++ + +          L + ++  +G   SLA A 
Sbjct: 278 FGEGRFRPGGAAGAVGYRVGAPGEGLRCMFHMMNEARIGVGLGAVMLGYAGYESSLAYAK 337

Query: 337 HYARRRHVSGGILIDQPV-------MKRAIADIALDIAAATALSFRLANSFDEAKS---- 385
              + R +        PV       +KR +      +    AL+   A   D+ +S    
Sbjct: 338 QRPQGRPLGAKDAGRPPVAIVEHADVKRMLLAQKAYVEGGLALALYCARLVDDKRSGSAT 397

Query: 386 -RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++E      ++ PI K W  +      + A++ +GGSGY  +  + +H+R++  N I  
Sbjct: 398 EQAEAGVLLELLTPIAKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQHWRDNRLNMIHE 457

Query: 445 GSGNAMVLDVLN 456
           G+     LD+L 
Sbjct: 458 GTHGIQGLDLLG 469


>gi|330464927|ref|YP_004402670.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328807898|gb|AEB42070.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 382

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 64/302 (21%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W PK+ S E                G GLTE   G+D     ++ + + DG  + ++G K
Sbjct: 110 WLPKLLSGE-------------ALAGFGLTEPGTGSDAGG--TETRAVLDGDEWVINGSK 154

Query: 233 WFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            F+++  +D  A + +  V G        +   +VP     G+P G       +K+G  +
Sbjct: 155 AFITNSGTDITALVTVTAVTGTRPDGAKELSTIIVP----SGTP-GFTVAPGYSKVGWTA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA- 333
           + T EL F         D  V   P E++         + L  LD   ++++ + V LA 
Sbjct: 210 SDTHELTFD--------DCRV---PAENLLGERGRGFAQFLRILDEGRIAIAALAVGLAQ 258

Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E+I YAR RH  G  + +   ++  +AD  +++ A TA   RLA  + +A +R   
Sbjct: 259 GCVDESIKYARERHAFGQPIGNYQAIQFKVAD--MEMKAHTA---RLA--YYDAAARMLA 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +  A I K     +A     EA +  GG G++ E  +AR +R+S    + +G G +
Sbjct: 312 GEPFKRQAAIAKLHASTIAVDNAREATQIHGGYGFMNEYPVARFWRDS--KILEIGEGTS 369

Query: 450 MV 451
            V
Sbjct: 370 EV 371


>gi|317407234|gb|EFV87217.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 376

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQV 249
           M +  +   + LTE   G+D+ A+ ++ ++  D  Y L G K F+++ ++    I+LA  
Sbjct: 112 MARGDIIGAIALTEPGAGSDLKAVRTRARRDGDH-YVLDGQKTFITNGVNAGLAIVLAST 170

Query: 250 EGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
           +  +G   L    +E+G P G       +KIG     T EL F         LLG  N +
Sbjct: 171 DPDLGARGLSLFCVEEGQP-GFTKGTPLSKIGQHCQDTCELYFDGLRLPVDCLLGRENNA 229

Query: 306 ----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               T  +   ++ I L  A  S+ GM   + EA  Y R R V G  +ID    +     
Sbjct: 230 FEYLTQELARERLAIAL-RAGASLEGM---IDEAAEYTRNRKVFGRRVIDYQNSR----- 280

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               +A+A A +  L    D+   +          A I K    +M  A++ + ++  GG
Sbjct: 281 --FKLASARAQATMLRVFLDDCLEKHMAGELDATRAAIAKLNATEMQGAILDDLLQLYGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  I R + ++ A  +  G+   M
Sbjct: 339 YGYMAEYGIGRAWADARALRLFGGTSEIM 367


>gi|294675581|ref|YP_003576196.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294474401|gb|ADE83789.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 402

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A++ +  +K +DG Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 144 FGLTEPDAGSDPASLKTVAKKTADG-YVLTGSKMWISNAPIADVFVVWAKSEAHGGKIKG 202

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++ + L+     GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 203 FVLEKGLK-----GLSAPKIAGKLSLRASITGEIVME---GVEVGEDALLPG-VEGLKGP 253

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAA 369
              L+ A   ++   +  AE   +A R++       D+P+ +       +A++  DI   
Sbjct: 254 FGCLNRARYGIAWGVMGAAEFCFHAARQYGLDRKQFDKPLAQTQLYQLKLANMLTDITLG 313

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + ++    DEA +  E       M  + K   C  A      A +  GG+G  E   
Sbjct: 314 LQAALQVGRLMDEANAAPE-------MISLIKRNNCGKALEAARNARDMHGGNGISESFQ 366

Query: 430 IARH 433
           + RH
Sbjct: 367 VIRH 370


>gi|295687526|ref|YP_003591219.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429429|gb|ADG08601.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 20/262 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGC 255
           + +TE   G+D+  I +  +K  +  Y L+G K F+++  +   I ++A+ +   G  G 
Sbjct: 131 IAMTEPGAGSDLQGIKTTAKKAGNQ-YVLNGSKTFITNGQTANLICVVAKTDPAGGARGT 189

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+   +E     G    R  +K+G  +  T EL F++       LLG  +   G  + M
Sbjct: 190 SLI--FVETDGAEGFERGRNLDKLGQEAQDTSELFFNDVKVPTENLLG-TDEGQGFFQLM 246

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    L+ A+  ++ +  +L   I Y + R   G  ++D    +  +A+   +   A 
Sbjct: 247 SQLPQERLNIAVQGMATIERALELTIAYVKDRKAFGKAILDFQNTQFVLAECKTEATVAK 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                      E K  +  A+ A       KYW   +   ++   ++  GG G++ E  I
Sbjct: 307 VFVNHCIGQHLEGKLDAATASMA-------KYWVSDLENKIVDRCLQLFGGYGFMNEYPI 359

Query: 431 ARHYRESPANSILLGSGNAMVL 452
           AR Y++S    I  G+   M L
Sbjct: 360 ARMYKDSRIQRIYGGTNEIMKL 381


>gi|226308675|ref|YP_002768635.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187792|dbj|BAH35896.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 383

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 35/306 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A +++L  T      + P++ + E   T             + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLISLFGTEEQKVKYLPRMATGEIRAT-------------MALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGS 266
            A+T+  +     +       W  ++  S    +L + +        G  +V  L+E G 
Sbjct: 133 QAMTTNAKSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIV--LVEHG- 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             GL   R   K+G +   + EL F N        L G      G +        +  A 
Sbjct: 190 -EGLTVSRDLPKLGYKGVESCELSFDNYRIAESAILGGTPGKGFGQMMKGLETGRIQVAC 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D 
Sbjct: 249 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P   +
Sbjct: 309 GERCDMEAGMAKLYA-------SEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPL--M 359

Query: 443 LLGSGN 448
           ++G G 
Sbjct: 360 IVGEGT 365


>gi|312884112|ref|ZP_07743824.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368160|gb|EFP95700.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 389

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 30/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + + +    Y L+G K W  + P +D  ++ A+     G   +
Sbjct: 130 LAMSEPNAGSDVVSMQLRAE-LEGEYYRLNGSKMWITNGPDADVVVVYAKTAPDQGSKGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L + + +G  + +  +K+G R + T EL F +       +LG++N      + +K+L
Sbjct: 189 TAFLVEKTFDGFSHAQKLDKLGMRGSNTCELVFKDCMVPVENVLGEVN------QGVKVL 242

Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   ++  +G    M+  L   I Y   R   G  + +  +++  +AD+     AA
Sbjct: 243 MSGLDYERVVLAAGPLGIMQACLDLVIPYVHDRKQFGRSIGEFQLVQAKVADMYTRTNAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++AA   +       +  ++A  +  +A++ +GG+GYI E  
Sbjct: 303 RAYLYAVAKACDAGQTTRKDAAGVIL-------YNAELATQMSLDAIQLLGGNGYINEYP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 356 AGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|299768736|ref|YP_003730762.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698824|gb|ADI89389.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKNKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        ++   V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|226940974|ref|YP_002796048.1| isovaleryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226715901|gb|ACO75039.1| Probable isovaleryl-CoA dehydrogenase [Laribacter hongkongensis
           HLHK9]
          Length = 388

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 33/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  + L+G K W  +   +D  ++ A+ +   G    
Sbjct: 126 LAMSEPNAGSDVVSMKLRAEAAGD-RFILNGSKMWITNGGDADVLVVYAKTDPAAG---- 180

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
           PR     ++E G P G  +    +K+G R + T  L F        N  G + G +NV  
Sbjct: 181 PRGITAFIVEKGMP-GFSHGPKLDKLGMRGSNTYPLFFDNVDIPAENVLGSVGGGVNVLM 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G ++  + ++    A   +  M+  L  A  Y   R   G  + D  +M+  +AD+ + +
Sbjct: 240 GGLDYERAVL----AAGPLGIMQACLDVAEPYLAERQQFGQPIGDFQLMQGKLADMYVTL 295

Query: 367 AAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +A+ A  + +  + D   + +S  ++AA A +       +  + A  +  +A++C+GG+G
Sbjct: 296 SASRAYVYAVGRALDAGYQGRSVRKDAAGAIL-------YAAENATRLALDAIQCLGGNG 348

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI +    R  R++    I  G+
Sbjct: 349 YINDYPAGRLLRDAKLYEIGAGT 371


>gi|114656347|ref|XP_510308.2| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 8 [Pan
           troglodytes]
 gi|332843533|ref|XP_001143110.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 5
           [Pan troglodytes]
          Length = 423

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|16877964|gb|AAH17202.1| Isovaleryl Coenzyme A dehydrogenase [Homo sapiens]
 gi|30583129|gb|AAP35809.1| isovaleryl Coenzyme A dehydrogenase [Homo sapiens]
 gi|61362788|gb|AAX42280.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|61362792|gb|AAX42281.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|123984092|gb|ABM83503.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|123998235|gb|ABM86719.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
          Length = 423

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|330835655|ref|YP_004410383.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567794|gb|AEB95899.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 361

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 31/244 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  ++ ++ +K+S G++ +SG K +++  M +D F++ A+   ++G FLV
Sbjct: 108 FALSEPCCGSDTRSMKTRAEKVS-GVWRVSGEKMWITQGMYADVFLVAAKTSEKIGTFLV 166

Query: 259 PRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
               +D      C +R K ++ GNR   T ++  +     L+G   V+   +   +I   
Sbjct: 167 RE--QD------CVEREKIEVSGNRGTGTAKIRLNECEADLIGGWQVTKYALSIGRI--- 215

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                 ++S + + LA     EA  +A  R   G  L++   ++   +D   D+ +  +L
Sbjct: 216 ------AISAIAIGLALGATEEAYGWAEERTAFGKKLLEHEGVQWMFSDSIADLESVKSL 269

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                 +F+     +E       +    K    K+A  V+   ++ +GG GY +     R
Sbjct: 270 LDVTCKAFENNWEMAEP------LIAALKLVSSKIANNVVDRMVQIMGGMGYAKSTRTER 323

Query: 433 HYRE 436
            YR+
Sbjct: 324 AYRD 327


>gi|29830933|ref|NP_825567.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29608046|dbj|BAC72102.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 608

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 45/287 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + + G K F++S    MS+  +  +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +  FLVP+   D      G  NG     +++K+G +++ T E+ F +     G+L+GD
Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGAYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351
            +   G  +  +I+ +  +     ++S +      A+ YA  R V G  L +        
Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYATER-VQGPDLANFMDKTAPK 340

Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399
                 P ++R++           AL    A   D+ + +           A   ++ PI
Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLHTAAIQDDIQVKESAGEDTTALEALNDLLLPI 400

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +  +     +A++++  GGSG+++E  I ++ R++  +++  G+
Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447


>gi|167647017|ref|YP_001684680.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349447|gb|ABZ72182.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 379

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D A + +  +   D  Y L+G K F+S   +SD ++++A+  V+G  G  + 
Sbjct: 124 LTEPGSGSDAANMRTTARLDGDH-YVLNGGKAFISGGGVSDVYVVMARTGVDGAKG--VS 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306
             ++E G+P GL +   + K+G  S  T  + F +              GF    + +  
Sbjct: 181 AFVVEKGTP-GLSFGANERKMGWNSQPTAAVNFDDCRVPVANRIGQEGEGFRFAMMGLDG 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G          L+ A  S+ G   +L  A  Y   R   G  L D   ++  +AD+A ++
Sbjct: 240 G---------RLNIASCSLGGAAFALDTAKAYLETRKQFGKPLKDFQALQFKLADMATEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +  R A++ D    ++ +      +  + K +       V  +A++  GG GY++
Sbjct: 291 EAARLMVRRAAHALDNRDPQATK------LCAMAKRFATDAGFQVANDALQLHGGYGYLQ 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  + R  R+   + IL G+   M
Sbjct: 345 DYPLERIVRDLRVHQILEGTNEIM 368


>gi|111019337|ref|YP_702309.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818867|gb|ABG94151.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +  +TT    + W PK  + E             +   +G+TE  GG+D+A++ +  
Sbjct: 97  APYLVQLTTEEQKQRWLPKFCTGE-------------LLTAIGMTEPSGGSDLASLKTTA 143

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  + ++G K F+++   +D  I+ A+         +     +    G    R  +
Sbjct: 144 VKDGDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLD 202

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G   + T EL F N       ++G+++   G +  M++L    + +A+ +++     L
Sbjct: 203 KVGQHESDTAELFFENVRVPSTNIIGEID--RGFIHMMEMLPQERVGAAVSNIAHAAPIL 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E I YA+ R   G  +      K  +AD+   +    A       +  + +  + +AA 
Sbjct: 261 EETIQYAKDRKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAK 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A       K+W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M
Sbjct: 321 A-------KWWTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIM 371


>gi|254283480|ref|ZP_04958448.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219679683|gb|EED36032.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 395

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D   + ++ + + DG Y LSG K W  +
Sbjct: 118 FGTEAQREKYLPKLATGEWIGCFGLTEPDYGSDPGGMVTRARTV-DGGYSLSGAKMWISN 176

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  +G +  F    +LE G P GL   +++ K+  R++ T E+   +  
Sbjct: 177 SPIADVFVVWAKTDDGVIRGF----VLEKGMP-GLSAPKIEGKLSLRASITGEIVMEDVV 231

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LL D+    GP         L++A   ++   +  AE   +A R +       ++
Sbjct: 232 VGEDALLPDVEGLKGPFS------CLNNARYGIAWGALGAAETCWHAARDYTMERKQFNR 285

Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           P     +++  +AD+  +I+ A     R     D  +   E       +  + K   C  
Sbjct: 286 PLAANQLVQLKLADMQTEISLALQGCHRAGVLMDAGQIAPE-------LISLIKRNSCGK 338

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           +  V  +A + +GG+G  +E  + RH
Sbjct: 339 SLDVARKARDMLGGNGISDEYPVMRH 364


>gi|195064828|ref|XP_001996645.1| GH22516 [Drosophila grimshawi]
 gi|193895423|gb|EDV94289.1| GH22516 [Drosophila grimshawi]
          Length = 424

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 121/265 (45%), Gaps = 38/265 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L ++E   G+D+ ++  + ++  D  Y L+G K+++++  SDA  M+  V  + G   VP
Sbjct: 163 LAMSEPGAGSDVVSMKLRAERKGD-YYVLNGSKFWITNG-SDAETMV--VYAKTGASGVP 218

Query: 260 R-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--- 309
                   ++E G       Q+L +K+G R ++T E+ F         DL V    +   
Sbjct: 219 DRHAITAFIVETGWEGFSVAQKL-DKLGMRGSSTCEIVFQ--------DLKVPAKNILGK 269

Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E+  + + +          A   V  M+ +   A  YA +R   G ++ +  +++  +AD
Sbjct: 270 ENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFDYAHQRKQMGKLIGEFQLIQGKMAD 329

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +++A  +  + +A S D     S++ A   +       +C + A  +  +A++ +GG
Sbjct: 330 MYTNLSACRSYLYAVARSCDAGVKSSKDCAGVIL-------YCAEKATQLALDAIQILGG 382

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +GYI E    R  R++    I  G+
Sbjct: 383 NGYINENPTGRILRDAKLYEIGAGT 407


>gi|118468931|ref|YP_889088.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170218|gb|ABK71114.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 382

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253
           + +TE   G+D+A + +   +  D  Y ++G K F++  + +D  +++A+        R 
Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDH-YVVNGAKTFITGGIQADLVVVVARTSTDPDNRRK 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--ED 311
           G  L+  ++EDG   G    R   K+G +   T EL F+        D+ V    V  E+
Sbjct: 183 GLTLL--VVEDGMA-GFSRGRELEKMGCKVQDTAELSFT--------DVRVPVANVLGEE 231

Query: 312 MKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +   YL           A+ SV+  R ++  AI Y + R   G  +      K  +A  
Sbjct: 232 GEAFSYLGHNLAQERLTVAVGSVAQARSAIDAAIDYTKTRKAFGTPVASFQNTKFELAAC 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           + ++ AA A+        D A +   +   +   A   K +C +M   V+   ++  GG 
Sbjct: 292 SAEVEAAQAM-------LDRAVALHVDGELSGADAARVKLFCTEMQARVVDRCLQLFGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y ++    I  G+   M
Sbjct: 345 GYMMEYPIARLYTDARVARIYAGTSEVM 372


>gi|77360399|ref|YP_339974.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875310|emb|CAI86531.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 385

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC------ 255
           LTE   G+D A++ ++  +  D  Y ++G K F+S       ++   V  R GC      
Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEVLV---VMARTGCDGPKGI 179

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP         G+ Y + + K+G  +  T  + F +     +   N+     E  K
Sbjct: 180 SAFIVP-----ADAKGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAHNLLGAEGEGFK 231

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +       ++ A  S+   + +L  A  Y + R   G  L     ++  IAD+  ++ 
Sbjct: 232 FAMQGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFKIADMNTELV 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +  RLA +F    + SE+  Y      + K +   +   V  +A++  GG GYI+E
Sbjct: 292 AARQM-VRLA-AFKLDNNDSEKTTYC----AMAKRFATDVGFTVCNDALQIHGGYGYIKE 345

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + RH R+   + IL G+   M
Sbjct: 346 YPLERHVRDVRVHQILEGTNEIM 368


>gi|327280200|ref|XP_003224841.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 422

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 32/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  Y L+G+K W  + P +D  I+ A+ +       V
Sbjct: 161 LAMSEANAGSDVVSMRLKADRKGD-YYVLNGNKFWITNGPDADVLIVYAKTDPSA----V 215

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
           P        ++E G P     Q+L +K+G R + T EL F        N  G L   + V
Sbjct: 216 PASQGITAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAKNVLGQLSKGVYV 274

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + D++ LI L +  + +  M+  L  A+ Y   R   G  +    +M+  +AD+  
Sbjct: 275 LMSGL-DLERLI-LSAGPLGI--MQAVLDNAVPYMHVREAFGQKIGQFQLMQGKMADMYT 330

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +     + +A + D     +++ A   + A        + A  V  + ++C+GG+GY
Sbjct: 331 RLMSCRQYVYNVARACDRGHFNAKDCAGVILYAA-------ECATQVALDGIQCLGGNGY 383

Query: 425 IEERSIARHYRESPANSILLGS 446
           I +  + R  R++    I  G+
Sbjct: 384 INDYPMGRFLRDAKLYEIGAGT 405


>gi|326473320|gb|EGD97329.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 435

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + +    G    + + K+G R+++T  L F +       LLG+        +  K  I 
Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288

Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            L+   + ++     LA       A +    R   G ++     M+  +A    +IAAA 
Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E   
Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R+S   +I  G+ N  +  +   L+K
Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|301773964|ref|XP_002922405.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 441

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 39/280 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P   +   IG L +TE   G+D+  I +  +K  DG  + L+G K F+++  +SD  I++
Sbjct: 170 PQMTSGKCIGALAMTEPGAGSDVQGIRTNAKK--DGSDWILNGSKVFITNGWLSDVLIVV 227

Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           A            +  FLV    E G    +  Q+L+ K+G ++  T EL F +      
Sbjct: 228 AVTNHEAHSPAHGISLFLV----ESGMKGFIKGQKLQ-KMGLKTQDTAELFFEDVRLPAS 282

Query: 297 FLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            LLG+ N      +   P E + I      A +++S       E  +Y + R   G  + 
Sbjct: 283 ALLGEENKGFYYLMQELPQERLLI------ADLAISASEFMFEETRNYVKERKAFGKTIA 336

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +A++   I    A         D      E+       A + KYW  ++   
Sbjct: 337 HMQTVRHKLAELKTQICVTRAF-------VDSCLQLHEKKRLDSATASMAKYWASELQNR 389

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V  + ++  GG GY+ E  IA+ Y ++ A  I  G+   M
Sbjct: 390 VAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIYGGTNEIM 429


>gi|284043121|ref|YP_003393461.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947342|gb|ADB50086.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 390

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 121/260 (46%), Gaps = 35/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D++ + +   K  D  + ++G K F+++   ++ + + A+ +   G      
Sbjct: 125 LTEPDAGSDVSGMKTTAVKKGDK-WVINGSKCFITNGSHANFYTVYAKTDKDAGHRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+VPR        G+   + ++K+G R++ T  + F         L+G+ N      +  
Sbjct: 184 FIVPR------DAGVVVDKKEDKMGQRASNTATITFPEVEIPADHLIGEEN------KGF 231

Query: 313 KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ ++ LD     V+ M     R ++  A+ Y++ R   G  +     ++  IAD+A +I
Sbjct: 232 KLAMMTLDRTRPGVAAMATGIARAAMEFAVDYSKERVQFGVPIAMHQAIQFMIADMATEI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  L+++ A   D  +  +  +++A+  A  T       A  V  +A++  GG G+I+
Sbjct: 292 EASRLLTWKAAFQLDNGERNTLVSSHAKRFAADT-------AMRVATDAVQVYGGYGFIK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    +  G+
Sbjct: 345 EYPVEKLMRDAKIMQLYEGT 364


>gi|322825515|gb|EFZ30450.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259
           +TE   G+D+AAI +  +K  D  Y ++G K W  +  +++ + +LA   EG +G F+V 
Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318
               D +  G+   + +  +G R + T  + F +    ++ + NV   P +  KI +   
Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259

Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  AI +V+  + ++ EA  YA +R   G  + +   +   +AD+A  I AA  L+
Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ +S +  A+ A++ A      C       +  A++  GG+G+     + + 
Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372

Query: 434 YRESPANSILLGS 446
           YR++   SI  G+
Sbjct: 373 YRDAKIFSIYEGT 385


>gi|260907334|ref|ZP_05915656.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 384

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 36/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ ++  +  D  Y ++G K F+S+    D  +++A+     G   V
Sbjct: 128 IAMTEPGTGSDLQSVKTKAVRDGDE-YVVNGSKTFISNGTHCDILVIVARTSEEPGAKGV 186

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS---TG 307
             ++ E     G    R+ +K+G R   T EL F        N  G + G   +      
Sbjct: 187 SLIVAEVADLPGFSRGRVLDKVGQRGQDTRELFFEDMRVPVDNVLGGVEGRGFIQLMQQL 246

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADI 362
           P E M I      A+   +    ++ EA+ YA+ R   G     QP+MK       +A+ 
Sbjct: 247 PQERMAI------AVAGATTAEAAVREAVAYAKEREAFG-----QPIMKFQNTKFVLAEC 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ +       L     + K  +E+A+         KYW       VI   ++  GG 
Sbjct: 296 ATEVFSTRTFVDHLTQLHIDGKLTTEQASAG-------KYWATDAQTNVIDRCLQVFGGY 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y ++    I  G+   M
Sbjct: 349 GYMMEYPIARMYADARVQKIYGGTNEIM 376


>gi|73541869|ref|YP_296389.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119282|gb|AAZ61545.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 389

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D+AA+    Q  + G  Y + G K W  +  ++D + +  +     G   + 
Sbjct: 130 LSEPDAGSDVAAMRCSAQLDAGGTHYVIDGAKTWISNGGIADFYCVFVRTGEAPGARGIS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    GL      + +     AT  L F N     G  LG+       V  M + I
Sbjct: 190 AFVVDADTPGLSIAERIDVMAPHPLAT--LRFDNCRVPVGNRLGEAGQGF-KVAMMTLDI 246

Query: 317 YLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  S   +  G  R +L EA+  AR R + GG+L D  + + AI D+A  I AA  L++R
Sbjct: 247 FRASVAAAALGFGRAALDEALARARARPMFGGVLADLQLTQAAIGDMATAIDAAALLTYR 306

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A   D    R + EAA A+++A        + A  VI  A++  GG G      +   Y
Sbjct: 307 AAWLRDVKGVRTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVKVGTRVEGLY 359

Query: 435 RE 436
           RE
Sbjct: 360 RE 361


>gi|23013421|ref|ZP_00053318.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 383

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 50/261 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE   G+D A++ +  +K  D  Y ++G K F++ +P +  F ++A+        G 
Sbjct: 122 FALTEPNAGSDAASLRTTARKDGDH-YIVNGTKRFITNAPEASIFTLMARTNPENKGAGG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
           +  F+V    E  SP GL   ++  K+G +   T ++ F       +N  G + G     
Sbjct: 181 ISAFIV----EADSP-GLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGVEGQ---- 231

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            G    MK+L   D   + +S   V ++E     ++ YA  R   G  + +  +++  +A
Sbjct: 232 -GFKTAMKVL---DRGRLHISATCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM----APAVIAE-A 415
           D   +  AA  +    A   D+  + S EAA            CCKM    A   IA+ A
Sbjct: 288 DSKTEAYAARCMVLDAARKKDQGINVSTEAA------------CCKMFASEAVGRIADRA 335

Query: 416 MECIGGSGYIEERSIARHYRE 436
           ++  GG+GYI +  I R YR+
Sbjct: 336 VQVHGGAGYIADYGIERFYRD 356


>gi|239787384|emb|CAX83860.1| Isovaleryl-CoA dehydrogenase [uncultured bacterium]
          Length = 390

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMRLKAEKKGD-RYILNGTKFWITNGPDADVLVVYAKTDPAAGSKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L +    G    +  +K+G R + T EL F +     + + NV     + + +L+  
Sbjct: 190 TTFLVEKGFKGFSVAQKLDKLGMRGSNTGELVFQDC---EVPEENVLNAIGKGVNVLMSG 246

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     ++G     M+  +   + Y   R   G  +    +M+  +AD+   + A  A 
Sbjct: 247 LDYERAVLAGGPLGIMQACMDVVVPYVHERKQFGEPIGHFQLMQGKLADMYTTLNACKAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A + +     W       +  EA++ +GG+GYI +    R
Sbjct: 307 VYAVARACDLGETTRKDAAGAILYSAEKATW-------MALEAIQTLGGNGYINDYPTGR 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 LLRDAKLYEIGAGT 373


>gi|163746186|ref|ZP_02153545.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161380931|gb|EDQ05341.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 32/261 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K +D  + L+G+K W  + P ++  ++ A+ +   G   +
Sbjct: 128 LAMSEVGAGSDVVSMKLNAEKRNDH-FRLNGNKYWITNGPDAETLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F +    F  +LG+        + +++L
Sbjct: 187 TAFLIEKSMKGFTTSNHFDKLGMRGSNTAELIFDDCEVPFENILGEEG------KGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   L E + Y   R   G  + D  +M+  +AD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEIMPYMAERKQFGQRIGDFQLMQGKMADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425
            A  + +A + D      ++AA            CC    + A     +A++ +GG+GY+
Sbjct: 301 RAYVYSVAQACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGYL 349

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R +R++    I  G+
Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370


>gi|226958412|ref|NP_002216.2| isovaleryl-CoA dehydrogenase, mitochondrial isoform 1 precursor
           [Homo sapiens]
 gi|119612819|gb|EAW92413.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|119612821|gb|EAW92415.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
          Length = 426

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 150 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 194

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 195 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 251

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 252 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 306

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 307 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 365

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 366 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412


>gi|125051|sp|P26440|IVD_HUMAN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|306897|gb|AAA52711.1| isovaleryl-coA dehydrogenase (IVD) [Homo sapiens]
 gi|6636436|gb|AAF20182.1| isovaleryl dehydrogenase [Homo sapiens]
 gi|189054861|dbj|BAG37702.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+G + V
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409


>gi|71002638|ref|XP_756000.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66853638|gb|EAL93962.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|159130054|gb|EDP55168.1| acyl-CoA dehydrogenase [Aspergillus fumigatus A1163]
          Length = 437

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 18/266 (6%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   TP   + W PK+              +  +   LG+TE   G+D+A I +  +  
Sbjct: 133 IARFGTPEQRRRWLPKV-------------ARGDIRFCLGITEPDAGSDVANIQTTARLD 179

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D  Y ++G K ++++ +   +   A   G  G   +  L+   +  G+  +R+ N   N
Sbjct: 180 GDH-YVVNGAKKWITNGIWADYCTAAVRTGGPGRNGISLLVIPLTAPGVTRRRMHNSGVN 238

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            S +T  L+F +       L+G  N     +        L  A  ++   RV   +A HY
Sbjct: 239 ASGSTF-LQFEDVRVPADNLIGKENKGFPIIMSNFNPERLTLACAALRLARVCAEDAFHY 297

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  LI +  ++  I    L I  A A   +L N  +  K R  +      M  
Sbjct: 298 AVQRETFGAPLIQRQAIQSKIFRFGLMIEPAYAFMEQLVNIIELTKDRPADDVKIGGMTA 357

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGY 424
           + K    +     + EA + +GG+GY
Sbjct: 358 LLKVMSTRALEKSVREAQQILGGAGY 383


>gi|297528548|ref|YP_003669823.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297251800|gb|ADI25246.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 386

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 19/265 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++ AAI +   +  D  Y ++G K ++++ + +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAAIKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +   G   +   + +    G    +++ K+G R + + EL F N     +   NV   
Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLRGSHSAELFFDN---LEVPAENVLGR 227

Query: 305 -STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361
              G V  +KIL    + + + + G  + L E  + YA +R   G  +I+Q  ++  +A+
Sbjct: 228 EGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +++ I   ++  +R+A   D+     +EAA       I K +  ++   +   A++  GG
Sbjct: 288 MSMLIEVLSSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY+++  I R++R++    I  G+
Sbjct: 341 LGYMKDYPIERYFRDARITKIYEGT 365


>gi|295135469|ref|YP_003586145.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294983484|gb|ADF53949.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 454

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 39/265 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQK       GLTE   G+ +A       K     + L+G K W  ++  +D  I+ A+ 
Sbjct: 186 MQKLEKIGAFGLTEPNVGSGVAGGLETTCKFDGENWILNGQKKWIGNATFADVTIIWARD 245

Query: 250 E--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATV-----------ELEFSNT 294
           E   +V  FLV    E  +P G   +++++K+  R   NA +            L+ +N+
Sbjct: 246 EDSNQVKGFLV----EKDNP-GFKAEKMEDKMALRIVQNAIITLTDCKVAESDRLQNANS 300

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F      L ++   V           A  +V   R +   A+ Y R+R   G  +    +
Sbjct: 301 FKDTANVLRMTRAGV-----------AWQAVGCARGAYESALKYTRKREQFGRPIASYQL 349

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  + ++  ++ A   L FRL+   D+     E A+ A++       +C      V++ 
Sbjct: 350 VQNHLVEMVSNLTAMQTLCFRLSEMQDQDMLTDEHASLAKV-------YCSMRMRDVVSR 402

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E +GG+G + E  +AR   ++ A
Sbjct: 403 AREVMGGNGILLEHDVARFVADAEA 427


>gi|169634301|ref|YP_001708037.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169794664|ref|YP_001712457.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184159528|ref|YP_001847867.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213157964|ref|YP_002320762.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482254|ref|YP_002324436.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239504119|ref|ZP_04663429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301345859|ref|ZP_07226600.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511362|ref|ZP_07236599.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596586|ref|ZP_07241594.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332851547|ref|ZP_08433524.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332867746|ref|ZP_08437818.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332873481|ref|ZP_08441432.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169147591|emb|CAM85452.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|169153093|emb|CAP02163.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
 gi|183211122|gb|ACC58520.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057124|gb|ACJ42026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987120|gb|ACJ57419.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|322509438|gb|ADX04892.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519459|gb|ADX93840.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729892|gb|EGJ61224.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733752|gb|EGJ64904.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332738306|gb|EGJ69182.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 385

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        +++  V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLSREVADSCLQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|309812945|ref|ZP_07706673.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433017|gb|EFP56921.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp.
           Ellin185]
          Length = 615

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 66/351 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + ++G K F++S  SD        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKATQNDDGTWNITGVKRFITSAESDMVDNVVHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F+VP+   D      G  NG     +++K+G + + T E+ F +     G LLGD
Sbjct: 224 KGLSLFIVPKFHVDLETGELGERNGAYVTNVEDKMGLKVSTTCEVTFGDGAPAVGTLLGD 283

Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI----DQP 353
           ++         +E+ ++ +       +++ +      A+ YA+ R V G  +     D P
Sbjct: 284 VHDGIAQMFKVIENARMFV----GTKAIATLSTGYLNALEYAKER-VQGADMTTPQKDAP 338

Query: 354 --------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS--EEAAYARIMA 397
                         ++++A A+    +   TA    + +   +    +  EE + A + A
Sbjct: 339 RVTITHHPDVRRSLMLQKAYAEGLRSLVMYTACQQDVVDQATKGNPAAELEEGSPAEMAA 398

Query: 398 -------PITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  PI K    + A  ++  E+++  GGSG+++E  + ++ R++  +++  G+   
Sbjct: 399 RLNDLLLPIVKGVGSERAWVLLGTESLQTYGGSGFLKEYPLEQYVRDAKIDTLYEGTTAI 458

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
             LD           F ++       LG   K++ T +  +    K + GL
Sbjct: 459 QGLDF---------FFRKIVKDQGVALGMLQKEIETTIGQAPEALKREAGL 500


>gi|221118085|ref|XP_002160610.1| PREDICTED: similar to Isobutyryl-CoA dehydrogenase, mitochondrial
           [Hydra magnipapillata]
          Length = 288

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D +++++  ++  D  Y L+G K F+S +  SD + ++A+  G     + CF
Sbjct: 33  LTEPDSGSDASSLSTNARQDGDH-YILNGSKMFISGAGESDIYAIMARSGGPGSKGITCF 91

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           LV    E G+  GL + + + K+G  S  T        ++   N  G      N++   +
Sbjct: 92  LV----EKGTA-GLEFGKKEKKVGWNSQPTRSVILDNCKVPAKNIIGQRGQGFNIAMNAL 146

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I    A  S+   + SL  A+ Y + R   G  L D    +  +A++  ++ A+
Sbjct: 147 NGGRISI----ASCSLGAAQKSLDLALDYVKSRKQFGKPLADFQNTQFKLAEMLTNLTAS 202

Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L    A + D  +S +   AA A++ A    +  C         A++  GG GY+++ 
Sbjct: 203 RLLVRHAATAIDNHQSNAPVLAAMAKLQATDKCFELCNT-------ALQLHGGYGYLKDY 255

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + +  R++  + IL G+   M
Sbjct: 256 QVQQFMRDTRVHQILEGTNEVM 277


>gi|118373206|ref|XP_001019797.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89301564|gb|EAR99552.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 417

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 29/254 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +K  D  Y L+G K W  +SP++D F++ A
Sbjct: 147 PRLATGELIGCFGLTEPNHGSDPGSMETRAKKDGDD-YILNGSKTWITNSPIADIFVVWA 205

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS- 305
           + E G +  F++ + ++     GL   +++ K+  R++ T  +   N        LNV  
Sbjct: 206 KDEQGDIRGFVLEKGMK-----GLTAPKIEGKLSLRASITGMILMDNVRVHKSQMLNVKG 260

Query: 306 -TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAI 359
             GP         L++A   +S   +  AE   +A R++       + P     ++++  
Sbjct: 261 LKGPFS------CLNNARFGISWGALGAAEYCFHAARQYTLDRKQFNVPLASFQLIQKKF 314

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +IA A     +++   D      E       M  + K   C  +  +  EA + +
Sbjct: 315 ADMQTEIALALQACLQVSRLKDSGNLAPE-------MISLVKRNSCMKSIQICREARDML 367

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  I RH
Sbjct: 368 GGNGIADEYHILRH 381


>gi|91777396|ref|YP_552604.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690056|gb|ABE33254.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 379

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 37/306 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    ++W P             P+ +    + + +TE   G+D+ +I
Sbjct: 93  SDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIAMTEPGTGSDLKSI 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +   +  D  Y ++G K F+S+ ++ D  +++ + +   G   V  ++ +    G    
Sbjct: 140 RTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSLIMVETDRAGFRRG 198

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMS 324
           R   K+G  +  T EL F N       L+G+ N      +   P E + I +Y       
Sbjct: 199 RKLEKVGQAAADTAELFFDNVRVPATNLIGNENGGFIHLMEELPQERLIIAVY------C 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + +   L   + Y + R      + D    K  +AD+     A   L         E K
Sbjct: 253 AAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYIREHMERK 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A++ A     W C      I E ++  GG GY+ E  IAR + +     I  
Sbjct: 313 LTLQEAAIAKLFA-TEAMWKC------IDEMVQLHGGYGYMLEYPIARAFADMRVTRIFG 365

Query: 445 GSGNAM 450
           G+   +
Sbjct: 366 GTSEVL 371


>gi|330875099|gb|EGH09248.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 387

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|306839890|ref|ZP_07472688.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
 gi|306405076|gb|EFM61357.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
          Length = 592

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAY----ARIMAP 398
                +I+ P ++R +  +     AA ++++  A++ D +  +   +A +    A ++ P
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHVTDGADAQFWSDRAGLLTP 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|288920066|ref|ZP_06414385.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288348549|gb|EFC82807.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 401

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 39/284 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PKI S E+  +               LTE+  G+D A + +   +  DG +
Sbjct: 107 TEEQRQTYLPKIASGEWTAS-------------FALTEEGAGSDPAGLATTAVRKDDG-W 152

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            ++G K +++ +P +D  ++ A+ +        +  F+V R        G+       K+
Sbjct: 153 VINGSKRYITNAPSADVLMVFARTDPAATGGDGISVFMVER-----DTPGVSVAPKDVKM 207

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           G   + T ++ F +        + G+     G    M+ L +  +  A + V   +  + 
Sbjct: 208 GQAGSLTADVHFDDVRVGPETLVGGEAGEGRGYRTAMRCLAHGRIHIAALCVGMAQRLVD 267

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E++ YA  R   G ++    +++  +AD A D+ AA AL  + A +FD+           
Sbjct: 268 ESVAYAASRSQGGQVIGTYQLIQGLLADSATDLYAARALVTQTAAAFDDGSD-------T 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           RI     KY+  +    +   A++  GG+GY+    + R YR++
Sbjct: 321 RIGPSCAKYFASEAVGRIADRAVQIHGGAGYMRGVPVERFYRDA 364


>gi|86131523|ref|ZP_01050121.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817968|gb|EAQ39136.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 380

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 40/278 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  +  +      D  Y L+G K W  +   SD ++++AQ +   G      
Sbjct: 125 LSEPEAGSDATSQATTAIDKGDH-YVLNGTKNWITNGGRSDVYLVIAQTDREKGHRGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V + +E     G      ++K+G R + T  L+F++             FGF      
Sbjct: 184 FIVEKGME-----GFEVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +S G        I + +  + ++     LA  + Y++ R   G  + +   +   +AD+ 
Sbjct: 239 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I AA  L  + A   D+  +  + +A A++       +  K+A     EA++  GG+G
Sbjct: 290 VEIEAARHLVMKAAWDKDQGNNYDQSSAMAKL-------YASKVAMEQTVEAVQIHGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +++E  + R  R++    I  G+     + +   L KG
Sbjct: 343 FVKEYHVERLMRDAKITQIYEGTSEIQKIVISRSLIKG 380


>gi|302521377|ref|ZP_07273719.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302430272|gb|EFL02088.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 382

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 23/267 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-- 305
            + G+    +   ++E G   G+ +   + K+G + + T E+ F N    +  D  +   
Sbjct: 175 TDPGKRSKGISAFVVEKGD-EGVSFGAPEKKLGIKGSPTREVYFDNVR--IPADRMIGAE 231

Query: 306 -TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
            TG    MK L   D   ++++   + +A+     A  Y + R   G  + D   ++  +
Sbjct: 232 GTGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFML 288

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ I+AA AL+++ A + +   +   +  Y    A   K +   +A  V  +A++ +
Sbjct: 289 ADMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLL 342

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY  +  + R  R++    I  G+
Sbjct: 343 GGYGYTRDYPVERMMRDAKITQIYEGT 369


>gi|188575652|ref|YP_001912581.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520104|gb|ACD58049.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 391

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A
Sbjct: 126 PEMATGRVIGCFGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWA 184

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +  V  FLV     +    G     + +K+  R++ T  L   N F      L  + G
Sbjct: 185 HTDDGVRGFLV-----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAG 239

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I   ++      L EA+ YA  R + G  L      +  +AD+A  
Sbjct: 240 LKAPLSCLNQARYGIAWGAIGAAVACLREALTYAGERILFGRPLAATQSAQIKLADMARG 299

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I+ A  L+ +L    +    R E+ + A       K+  C+MA  +  E  + +G +G  
Sbjct: 300 ISTAQLLALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDIARECRDLLGAAGIT 352

Query: 426 EERSIARH 433
            E    RH
Sbjct: 353 TEHVAIRH 360


>gi|111219692|ref|YP_710486.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147224|emb|CAJ58874.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 392

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 29/278 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+   + +  + LTE  GG+D  A++ +     DG  + + G K F++ +P++D F++ A
Sbjct: 119 PLIAGTSSASICLTEPHGGSD--ALSPRTTARLDGDEWVIDGSKTFITNAPIADVFLVFA 176

Query: 248 QVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
           +  G     R G       +E  +P GL   +  +K+  RS+ T E+   N   ++  +L
Sbjct: 177 RTSGENRRARGGTAF---FVEKDTP-GLSVGQPFDKLSLRSSPTAEVFLDNVRVSWDQVL 232

Query: 300 GDLNVS-TGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           G++++     +E + +    + A  S +G+ +  L  A+ Y+ +R V G  L    + + 
Sbjct: 233 GEVDMGFYYMLEGLDLERVFEGA--SNTGIAQACLELAVEYSGQRTVFGEQLSSYQLTQD 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA IA  +  +  + + L    +  +  +  +A       I K +  ++A     E ++
Sbjct: 291 KIARIATGVEMSRVMFYHLIRELERGEELTRSSA-------ILKLYSSQVAVEASREVVQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +GG G +EE   AR YR++  + I  G+G + ++ V+
Sbjct: 344 ILGGYGLMEEYPAARLYRDAKHHEI--GAGTSEIMKVI 379


>gi|91779013|ref|YP_554221.1| butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91691673|gb|ABE34871.1| Butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 377

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+++     ++  F +     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGARAHVAIVFAVTDPDRGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   + +A A   A R + S     G  L +   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDAARLYASERIQFGKALKEHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A    E K    EA+ A++ A        ++A  + + A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRTEGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|54022972|ref|YP_117214.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014480|dbj|BAD55850.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 386

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ ++  D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 130 LSEREAGSDAASMRTRARQDGDD-WILNGSKCWITNGGKSSWYTVMAVTDPDKGANGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G     L++K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 189 FMVHKDDEGFVVGPLEHKLGIKGSPTAELYFENC--RIPGDRIIGEPGTGFKTALQTLDH 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V LA+     AI Y + R   G  + D    +  +AD+A+ I AA  + + 
Sbjct: 247 TRPTIGAQAVGLAQGALDAAIAYTKDRKQFGQAIADFQNTQFMLADMAMKIEAARLMVYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V   A++  GG+GY  +  + R  R
Sbjct: 307 SA-----ARAERGEKNLGFISAA-AKCFASDVAMEVTTNAVQLFGGAGYTTDFPVERMMR 360

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 361 DAKITQIYEGT 371


>gi|302343877|ref|YP_003808406.1| butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
 gi|301640490|gb|ADK85812.1| Butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
          Length = 384

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 37/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA------QVEGR 252
             LTE   G+D A I +  +   D  + L+G K F+++  ++D   + A      +  G 
Sbjct: 123 FALTEPEAGSDAANIQTTAELKGDH-WVLNGRKHFITNGDIADVATVFAANDRQKKARGG 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
           +  F+V +        G     ++ K+G R + T EL F        N  G   G+ NV 
Sbjct: 182 ITAFIVEKTFP-----GFYVGTIERKMGLRGSHTCELIFDDCRVPRENVIG---GETNVG 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            G    MK L   D   +++    +  A+     +I YA++R   G  + +   ++  +A
Sbjct: 234 QGFKTAMKTL---DKGRLTMGASALGSAQKLMDLSIAYAKQRVQFGQPIANFQAIQIKLA 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  + +  A        R +  A     A + K +C +MA      A++  G
Sbjct: 291 DMATHIYAARQMLYHAA------WLRDKRGAAVVKEASMVKLFCTEMANRAADMAVQIHG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY+ +  + R YR+    +I  G+
Sbjct: 345 GMGYVRDFPVERFYRDLRLTTIYEGT 370


>gi|254718592|ref|ZP_05180403.1| Acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265983568|ref|ZP_06096303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|264662160|gb|EEZ32421.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
          Length = 592

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAY----ARIMAP 398
                +I+ P ++R +  +     AA ++++  A++ D +  +   +A +    A ++ P
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHVTDGADAQFWSDRAGLLTP 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|150376383|ref|YP_001312979.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150030930|gb|ABR63046.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 382

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 20/273 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+    V     LTE   G+D AA+ ++  +  +  Y L+G K F+S + +S  +I++A+
Sbjct: 114 PLLTMDVLASYCLTEPGSGSDAAALKTKAVREGEA-YLLTGQKQFISGAGVSGLYIVMAR 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301
             G  G   +   + +    GL +   + K+G  +  T       V +   N  G     
Sbjct: 173 T-GEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDSVRVPVENRLGAEGEG 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++   ++  ++ I    A  S+ G + +  +A+ Y + R   G  + +   ++  +AD
Sbjct: 232 FRIAMAGLDGGRLNI----AAASLGGAQSAFDKALAYVQGRRAFGKAIGEFQALQFRLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A D+  A    +R A++ D A   + +      +  + K +      AV  +A++  GG
Sbjct: 288 MATDLEIARTFLWRAASALDAADPEATK------LCAMAKRFVTDRCFAVANDALQLHGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GY+ +  + +  R+   + IL G+   M L V
Sbjct: 342 YGYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 374


>gi|35186984|gb|AAQ84159.1| PlmL [Streptomyces sp. HK803]
          Length = 388

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 35/261 (13%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG 254
           + I   LTE   GT  A IT+   +  D  Y LSG K  ++  M  D +++ A+V G  G
Sbjct: 116 IKIAFALTEPGNGTG-ADITTSVVREGD-TYYLSGRKHLITFGMRCDYYLLAARVAGSAG 173

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
                  LVPR     +  G+  +     +G        + F  T       LG+     
Sbjct: 174 HEGTVALLVPR-----NAPGVSAEDTSRTMGVTGTDHASIVFDRTPVPVDHRLGEEG--- 225

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
              + +++ +  +L  + +SV+   V LA+     A+ YAR R   G  L ++  ++  +
Sbjct: 226 ---QGLEVFLGGFLTPSRISVAMSCVGLAQRAQQLAVDYARSRVTFGKSLTERQAIQFML 282

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+ A DI AA  L    A  F+E       A  A + + + K     M   V  +A++  
Sbjct: 283 AENAADIEAARQLVLHAARRFEEG------ADDASMQSSMAKMHAVTMLTTVTDKALQVH 336

Query: 420 GGSGYIEERSIARHYRESPAN 440
           GG GY + + I R YR++ A 
Sbjct: 337 GGLGYWKSQKIERVYRDARAQ 357


>gi|77404554|ref|YP_345130.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|77019935|dbj|BAE46310.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 386

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 35/306 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S   A  +A   T    K W  K  S E               + + +TE   G+D+ A+
Sbjct: 98  STIVAHYIAAYATEDQKKRWLSKCASGE-------------SVLAIAMTEPGTGSDLQAV 144

Query: 215 TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCY 272
            +   +   G Y ++G K F+S +   D  +++A+ +   G   +  L+ E  +  G   
Sbjct: 145 RTTAVR-DGGHYVINGSKTFISNASHCDLLVIVAKTDPSQGSKGISLLVAETENLPGFER 203

Query: 273 QRLKNKIGNRSNATVELEFS-------NTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMS 324
            R+ +KIG     T EL F+       N  G + G       G ++  ++++ +    ++
Sbjct: 204 GRVLDKIGQHGQDTRELSFTDMRVPAANLLGGVEGQGFYQLMGQLQRERLILGVGGVAVA 263

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + +  S    I YA+ RH  G  +++    K  +A+   D+ A   L        D   
Sbjct: 264 EAAVAES----IRYAKERHAFGKPILNFQNTKFVLAECKTDVLAGKTL-------MDHCI 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R  +       A + K W       ++   ++  GG GY+ E  IA+ Y  S    I  
Sbjct: 313 QRHLDGTLDAATASMAKLWGSDKQCEIVDRCLQVFGGYGYMMEYPIAQMYAASRVQKIYG 372

Query: 445 GSGNAM 450
           G+   M
Sbjct: 373 GTNEIM 378


>gi|197099190|ref|NP_001125529.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pongo
           abelii]
 gi|68565360|sp|Q5RBD5|IVD_PONAB RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|55728362|emb|CAH90925.1| hypothetical protein [Pongo abelii]
          Length = 423

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 45/290 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +  + A  V  + ++C GG+GYI +  + R  R++    I  G+
Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 406


>gi|326800396|ref|YP_004318215.1| glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326551160|gb|ADZ79545.1| Glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 452

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 47/278 (16%)

Query: 180 SREYDPT-NKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLS 236
            RE+ P  NK  MQK       GLTE   G+  A  +T+  ++ ++G + L+G K W  +
Sbjct: 178 KREWLPQMNK--MQKIGA---FGLTEPEVGSGAAGGLTTTCKRTAEG-WVLNGQKKWIGN 231

Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR---------SNA 285
           +  +D  ++ A+   +G+V  F+    L+  +P G   +++K K+  R          + 
Sbjct: 232 ATFADLIVIWARDLDDGQVKGFI----LKKDTP-GFSVEKIKGKMALRIVQNGLITLKDC 286

Query: 286 TVE----LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            VE    L  +N+F      L ++   V           A M+V   R +   A+ Y R+
Sbjct: 287 VVEEKDRLPHANSFKDTANVLRMTRAGV-----------AWMAVGCARGAYESALDYTRK 335

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +++  + ++  ++ A   L FRL+   D  + + E A+ A++      
Sbjct: 336 RKQFGKPIASFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV------ 389

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +C      ++ +A E +GG+G + E  +AR   ++ A
Sbjct: 390 -FCSLRTRDIVGQAREVMGGNGILLEHDVARFVADAEA 426


>gi|302546947|ref|ZP_07299289.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464565|gb|EFL27658.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 381

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 26/247 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV------EGRVG 254
           LTE   G+D + I ++  +  D +Y L+G K F++ +P++  FI+ A+        G + 
Sbjct: 122 LTEAEAGSDPSGIRTRAVRDGD-VYVLNGSKRFITNAPLAGVFIVFARTGPQSTGPGGIS 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F V     D    G+      +K+G     + E+ F +       L+G+       V  
Sbjct: 181 VFAV-----DADTPGVTVGPPDHKMGQSGALSAEVFFDDVRVPASALVGEREEEGFHVA- 234

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L    L  A M V   R  L E++ +A      G  + +  +++  +A+   ++ AA
Sbjct: 235 MRSLARGRLSVAAMCVGLARRMLDESVAHASVSRQGGRPIGEYQLVQAMLAESHAELYAA 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+    A ++D  + R       R+     K +C +MA  V   A++  GG GY+    
Sbjct: 295 RAMVLEAARAYDSGEDR-------RLAPSSAKLFCSEMAGRVADRAVQIHGGMGYMRHVP 347

Query: 430 IARHYRE 436
           + R YR+
Sbjct: 348 VERFYRD 354


>gi|169632984|ref|YP_001706720.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii SDF]
 gi|169151776|emb|CAP00595.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii]
          Length = 381

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTYLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V  +R ++  A  Y + R+  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERYAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|318056740|ref|ZP_07975463.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318080394|ref|ZP_07987726.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 382

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305
            +       +   + + S  G+ +   + K+G + + T E+ F N    +  D  +    
Sbjct: 175 TDPGKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVR--IPADRMIGAEG 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK L   D   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 233 TGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I+AA AL+++ A + +   +   +  Y    A   K +   +A  V  +A++ +G
Sbjct: 290 DMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369


>gi|293602794|ref|ZP_06685234.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818810|gb|EFF77851.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 392

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 25/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G + G + V       
Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNGGVKV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD     +SG  + + +A+      Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERAVLSGGPLGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  +++  + D  K  +E     R        +  + A  +  E ++ +GG+GYI 
Sbjct: 298 QASRAFCYQVGKNLD--KLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYIN 355

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 356 EYPVGRLWRDAKLYEIGAGT 375


>gi|226361475|ref|YP_002779253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239960|dbj|BAH50308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +  +TT    + W PK  + E             +   +G+TE  GG+D+A++ +  
Sbjct: 97  APYLVQLTTEEQKQRWLPKFCTGE-------------LLTAIGMTEPSGGSDLASLKTTA 143

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  + ++G K F+++   +D  I+ A+         +     +    G    R  +
Sbjct: 144 VKDGDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLD 202

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G   + T EL F N       ++G+++   G +  M++L    + +A+ +++     L
Sbjct: 203 KVGQHESDTAELFFENVRVPSANIIGEID--RGFIHMMEMLPQERVGAAVSNLAHAAPIL 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E I YA+ R   G  +      K  +AD+   +    A       +  + +  + +AA 
Sbjct: 261 EETIQYAKDRKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAK 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A       K+W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M
Sbjct: 321 A-------KWWTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIM 371


>gi|163753133|ref|ZP_02160257.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
 gi|161326865|gb|EDP98190.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
          Length = 392

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   +T+  + + D  Y L+G K W  +SP     ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPGGMTTNYKDMGDH-YLLNGAKMWISNSPFCQIAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       LL + +    P      
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAP------ 243

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A
Sbjct: 244 LGCLDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++RL    +  K+ S + + A       K    +MA  +  EA + +GG G   E S
Sbjct: 304 QLLAWRLGVLRENGKATSAQISMA-------KRNNVEMALKIAREARQMLGGMGISGEYS 356

Query: 430 IARH 433
           I RH
Sbjct: 357 IMRH 360


>gi|326329794|ref|ZP_08196114.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952380|gb|EGD44400.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 385

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 41/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A +T+  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMTTNAKLTEDGKHYVLNGAKTFITGGVNADRVIVCARTAPATPEDR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +  L  D    G    R  +K+G + + T EL F+        D+ V   PVED+
Sbjct: 184 RGGITL--LAVDTKLPGYEVGRKLDKLGLKVSDTAELSFT--------DVQV---PVEDV 230

Query: 313 -----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                K   YL   +          + +    ++  A  Y   R V G  +      K  
Sbjct: 231 LGEVGKGFSYLGQNLPVERLGIAVGAYAQAAAAVEFAKAYVHDRKVFGTAVASFQNTKFE 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A+  R   + D     + EAA A++       +C ++A  VI   ++ 
Sbjct: 291 LAACKAEVDAAEAVVDRAIEAEDAGTLTAAEAASAKL-------FCTEVAHRVIDRCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GG GY+ E  IAR Y ++  N I  G+   M L
Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKL 377


>gi|126724791|ref|ZP_01740634.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126705955|gb|EBA05045.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 414

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D   + +  +K ++G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 156 FGLTEPDAGSDPGGMKTVAKKTANG-YVLNGSKMWISNAPIADVFVVWAKSEEHGGKIRG 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++     D    GL   ++ NK+  R++ T E+      G  +G+ +     VE +K  
Sbjct: 215 FIL-----DKGMTGLSAPKIGNKLSLRASITGEIVMD---GVEVGE-DALLPNVEGLKGP 265

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +I+  
Sbjct: 266 FGCLNRARYGISWGVMGAAEFCWHSARQYGLDRKQFGKPLAGMQLYQKKLADMQTEISLG 325

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S R+    DE  +  E       M  I K   C  A  +   + +  GG+G   E  
Sbjct: 326 LQASLRVGRLMDEGNAAPE-------MISIIKRNNCGKALDIARMSRDMHGGNGISAEFQ 378

Query: 430 IARH 433
           I RH
Sbjct: 379 IMRH 382


>gi|313236473|emb|CBY11788.1| unnamed protein product [Oikopleura dioica]
          Length = 414

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 35/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV----- 253
           + +TE   G+D+  + +  ++  D  + ++G K F+++   +D  I+ A  +        
Sbjct: 154 IAMTEPGAGSDLQGMKTFAKRDGDD-WIINGSKVFITNGWHADMVIVCAITDPTAKSAAK 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG-- 307
           G  L   L+EDG P G    R  NKIG +   T EL F +    T   L G+  ++ G  
Sbjct: 213 GISLF--LIEDGMP-GFNKGRKLNKIGLKGQDTAELFFDDLRVPTSAILGGEKGLNRGFG 269

Query: 308 ------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 P E  ++LI       + + M  +      Y + R   G  L     ++  +A 
Sbjct: 270 MLMHELPRE--RLLI----TAQACATMEYAFECTREYVKERKAFGKTLSKLQTIQHDLAA 323

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           I  DIA A        N  D +    E+       A + KYW  +     +++ ++  GG
Sbjct: 324 IKTDIAVAR-------NFTDTSIQMYEDGILDYNTASMGKYWVTEKNNENVSKMLQMFGG 376

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  IAR + +S   SI  GS   M
Sbjct: 377 WGYMWEYPIARMFADSRVYSIYGGSNEIM 405


>gi|307317497|ref|ZP_07596936.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306896655|gb|EFN27402.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 386

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           L +TE   G+D+  +    +   D  + ++G K F+S      F+++    G        
Sbjct: 122 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 180

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++ CFLV R    G+P G   +   N + +R      L F +       +LG+++   
Sbjct: 181 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHKGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D      L  A  SV   R +   A+ YA  R   G  +     +   +AD+  +I
Sbjct: 236 DIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQGVSFKLADMITEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A   D+    + E A A++ A        +M   V  EA++  GG G ++
Sbjct: 296 DAADLLTLSAAWRLDQGLPSNREIASAKVFA-------TEMLARVTDEAIQIYGGMGLMD 348

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 349 DLPLARFWRDARVERIWDGT 368


>gi|302551604|ref|ZP_07303946.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469222|gb|EFL32315.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 386

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 27/275 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--G 254
            GLTE  GG+D  A  +  +   S   + ++G K F+++  +D    + +  V GR   G
Sbjct: 123 FGLTEPDGGSDAGATRTTARLDESTNEWVINGTKCFITNSGTDITGLVTVTAVTGRSADG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             L+  ++   +  G       +K+G  ++ T EL F++       LLG+     G  + 
Sbjct: 183 KPLISSIIVPSTTPGFTVAAPYSKVGWNASDTRELSFTDVRVPAANLLGEEG--RGYAQF 240

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           ++IL   D   ++++ +   LA     E++ Y++ RH  G  +     ++  IAD  +++
Sbjct: 241 LRIL---DEGRIAIAALATGLAQGCVDESVKYSKERHAFGKPIAANQAIQFKIAD--MEM 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A TA   RLA  + +A  R    A  +  A + K     +A     EA +  GG G++ 
Sbjct: 296 KAHTA---RLA--WRDAAVRLVSGAPFKKEAALAKLHSSTVAVDNAREATQIHGGYGFMN 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 351 EYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 383


>gi|163855517|ref|YP_001629815.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259245|emb|CAP41545.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/314 (21%), Positives = 135/314 (42%), Gaps = 27/314 (8%)

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y  AQL + +L + ++     V    +  V  +  PK+ S              ++ + L
Sbjct: 84  YHNAQLASAYL-TTAIYGGMQVKYGASAEVKAEILPKLVS-------------GALRLAL 129

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+A+I+++  +  D  Y +SG K +++ + M+D  ++  +         + 
Sbjct: 130 CITEPATGSDVASISTRAVQDGDD-YLISGQKVYITCAHMADYLVVATKTNPDARHKGIT 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
             L D    G+  + LK  +G R   T E+ F +   +   +LG+LN     +     + 
Sbjct: 189 LFLVDAHAPGVAVRPLKG-LGRRMIHTNEVFFDDVRVSSARMLGELNGGWRALMRGLNIE 247

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A  +   M   + +A  +A +R   G  +     +    AD+ +   +A  ++  +
Sbjct: 248 RLCLAAAACGNMMRIIDDARDFATQRAQFGNPISSYQAIAHKFADMQIMATSARVMTLHV 307

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  ++ + E A A++ A  +   C  M        M+ +GG+GY+ E  +  ++R+
Sbjct: 308 AEMLDAGQTPTMETAIAKVQATESNSRCADMG-------MQIMGGAGYMMEHPMQMYFRD 360

Query: 437 SPANSILLGSGNAM 450
           +   +I  G+   M
Sbjct: 361 ARVGTIGGGTSEIM 374


>gi|85374972|ref|YP_459034.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84788055|gb|ABC64237.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 381

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 23/247 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGC 255
           + LG++E   G+D+AAI ++  +  D  + ++G K W  +   SD FI   +  E  V  
Sbjct: 123 VSLGISEPDVGSDVAAIKTRAVRDGD-FWVINGEKTWITNGAYSDIFICTCKTGENEVTH 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVE 310
            LV R   +     +     K  +  +S A + L       +NT G +   L  +    E
Sbjct: 182 ILVDRDESEYEVRDI----QKMALNGQSTAQIFLTECRVPVANTIGRVGDGLRNTLQVFE 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               +     A+ S+   R ++ EAI YAR R   G  +    ++   IA +A  I AA 
Sbjct: 238 ----IARCHMAMWSIGIARRAMDEAIAYARDRAQHGKKIAGHQLIADKIAIMATKIDAAR 293

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+ R A S  +A +R+E          + K++  +MA     +A++  GG+G   E  +
Sbjct: 294 LLTHR-AISLVQAGTRAETE------CSMAKWYATEMAIEATRDALQIHGGNGVTREFIV 346

Query: 431 ARHYRES 437
            R  RE+
Sbjct: 347 ERLVREA 353


>gi|294650410|ref|ZP_06727772.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823681|gb|EFF82522.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 390

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              +G L ++E   G+D+ ++  + ++  D  + L+G
Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ +   G   +   L +    G  +    +K+G R + T  L
Sbjct: 158 SKMWITNGGDADVLVVYAKTDPHAGAKGMTAFLIEKDMKGFSHGHHLDKLGMRGSNTYPL 217

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRH 343
            F N     +   NV  G     K+L+  LD     +S   + + +A     I Y  +R 
Sbjct: 218 FFDNV---EVPVENVLGGVGNGAKVLMSGLDYERTVLSAGPLGIMDACMDVVIPYLHQRE 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400
             G  L +  +M+  +AD+     A  AL + +  + D+A   +S  ++AA A + A   
Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             W       +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373


>gi|226361029|ref|YP_002778807.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239514|dbj|BAH49862.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 382

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 14/242 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  + ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTAAVRDGDH-FVVNGAKTFITSAVRADFVVTAVRTGGAGAAGVS 182

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            L +E G+P G    R  +K+G R++ T EL F +       L+G+ N     +    + 
Sbjct: 183 LLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPAANLVGEENSGFAQIAQAFLT 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  + S  +  L   + + R R   G  LI +  ++  + ++A     A   +  
Sbjct: 242 ERIALAAQAYSSAQRCLDLTLQWVRDRETFGRPLISRQSVQNTVTEMARRTDVARVYTRA 301

Query: 376 LAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           L   S    +    E  +A+  A     W          +A++  GG GY+ E  + R Y
Sbjct: 302 LVERSLVSNEDFIAEVCFAKNTAVEAGEWVAN-------QAVQLFGGLGYMRESEVERQY 354

Query: 435 RE 436
           R+
Sbjct: 355 RD 356


>gi|195019873|ref|XP_001985073.1| GH14704 [Drosophila grimshawi]
 gi|193898555|gb|EDV97421.1| GH14704 [Drosophila grimshawi]
          Length = 419

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D++ I ++ +K  D  Y L+G K W  +  +++ + +LA+      C     
Sbjct: 155 VTEPGAGSDVSGIKTRAEKKGDE-YVLNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 213

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V R     +P GL   R +  +G R++ T  + F +     +   NV  G     
Sbjct: 214 FTGFIVDR----DTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLVGEGAGF 265

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +
Sbjct: 266 KIAMGTFDKTRPPVAAGAVGLAQRCMDEALKYALERKTFGVPIAHHQAVQFMLADMAIGV 325

Query: 367 AAATALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              + L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+ 
Sbjct: 326 -ETSRLAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFN 377

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 378 SEYPVEKLMRDAKIYQIYEGT 398


>gi|195126441|ref|XP_002007679.1| GI12250 [Drosophila mojavensis]
 gi|193919288|gb|EDW18155.1| GI12250 [Drosophila mojavensis]
          Length = 420

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++ +K  D  Y ++G K W  +  +++ + +LA+      C     
Sbjct: 155 VTEPGAGSDVAGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 213

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V R        GL   R +  +G R++ T  + F +     +   NV  G     
Sbjct: 214 FTGFIVDR-----ETPGLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGAGF 265

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +
Sbjct: 266 KIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAHHQAVQFMLADMAIGV 325

Query: 367 AAATALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             +  L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+ 
Sbjct: 326 ETSR-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFN 377

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 378 SEYPVEKLMRDAKIYQIYEGT 398


>gi|167566097|ref|ZP_02359013.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 398

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  +  Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGE-RYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   I Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            + +    D   + S   A+ R +    A +  Y   K A  +  EA++ +GG+GYI E 
Sbjct: 305 LYTVGRHLDAGGTASAGGAHVRQVRKDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEY 363

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 364 PVGRLWRDAKLYEIGAGT 381


>gi|50556786|ref|XP_505801.1| YALI0F23749p [Yarrowia lipolytica]
 gi|49651671|emb|CAG78612.1| YALI0F23749p [Yarrowia lipolytica]
          Length = 417

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 36/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
            GLTE   G+D  ++ +  +      G+  L+G K W  +SP++D  ++ A+++G++  F
Sbjct: 156 FGLTEPNHGSDPGSMETVAKMHPTKKGVIVLNGAKNWITNSPIADLMVVWAKLDGKIRGF 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           LV R       +GL    +KNK   R++ T       VE+   N F  + G      GP 
Sbjct: 216 LVER---SQVASGLATPAIKNKTALRASITGMIQMDDVEIPVENMFPEVTG----LKGP- 267

Query: 310 EDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIA 363
                   L+SA   ++ G   +L+E+I  AR     R+   G  L    ++++ +AD  
Sbjct: 268 -----FTCLNSARYGIAWGTMGALSESIKLAREYSLDRKQFKGQPLAKYQLIQKKLADAL 322

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D       + ++    D      E       +  + K   C  A A     ME  GG+ 
Sbjct: 323 TDATYGQVAAIQVGRLKDAGNCPPE-------LISMIKRQNCDRALAGARNLMEIFGGNA 375

Query: 424 YIEERSIAR 432
             +E  I R
Sbjct: 376 ASDEYHIGR 384


>gi|83854753|ref|ZP_00948283.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83941276|ref|ZP_00953738.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83842596|gb|EAP81763.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83847096|gb|EAP84971.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 407

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  K ++G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAVKTANG-YKLTGSKMWISNAPIADVFVVWAKSEEHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++ NK+  R++ T E+   N       LL  +    GP    
Sbjct: 208 FILEKGMK-----GLSAPKIGNKLSLRASITGEIVMDNVEVGEDALLPHVEGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA
Sbjct: 259 --FGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKKLADMQTEIA 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S ++    D A +  E       M  I K   C  A  +   + +  GG+G   E
Sbjct: 317 LGLQASLQVGRLMDNANAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISGE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVIRH 375


>gi|229030770|ref|ZP_04186796.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1271]
 gi|228730532|gb|EEL81486.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1271]
          Length = 382

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPILDYFIISASIEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         NV  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTNVLGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQAARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     + +++ +AM  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNASISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|284034692|ref|YP_003384623.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283813985|gb|ADB35824.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 619

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 58/296 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC- 255
           LTE   G+D+ A  ++     DG + + G K F++S   D       ++LA+ +G  G  
Sbjct: 164 LTEPDAGSDVGAGRTKATLQDDGSWHIEGVKRFITSGEHDMTENIVHLVLARPQGIEGVG 223

Query: 256 ---------FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
                    F+VP+   D       G  NG     ++ K+G + + T E+ F       G
Sbjct: 224 GPGTKGLSLFIVPKYDFDLETGELTGERNGAYVTNVEKKMGIKVSTTCEITFGENAPAKG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--- 351
           +LLG+  V  G  +  +++ Y  +     +++ +      A+ YA++R V G  L +   
Sbjct: 284 YLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKQR-VQGADLTNAAK 340

Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393
                     P ++R++        A  AL    A   D    R+E+A YA         
Sbjct: 341 TAPRVTITHHPDVRRSLMTQKSYSEALRALVLFTATYQD----RAEQARYAGEHDDEAER 396

Query: 394 --RIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              ++ P+ K +  + +  ++  E+++  GGSG++++  I ++ R++  +++  G+
Sbjct: 397 VNDLLLPLVKGYGSEKSWTLLGTESLQTFGGSGFLQDYPIEQYVRDAKIDTLYEGT 452


>gi|108798724|ref|YP_638921.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867842|ref|YP_937794.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434327|ref|YP_001070018.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108769143|gb|ABG07865.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693931|gb|ABL91004.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126234127|gb|ABN97527.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 391

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 27/254 (10%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250
           V     LTE   G++ A + ++  +   G + ++G K F++ +P +D F++ A+      
Sbjct: 119 VVASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITNAPTADLFVVFARTRPADD 178

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DL 302
               +  FLVP        +G+       K+G     T ++ F++       L+G   D+
Sbjct: 179 RGAGIAVFLVP-----ADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +   +  +++  A ++V   + +L E++ YA      G  + D  +++  +AD 
Sbjct: 234 GYRAALITLARGRVHI--AALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQ 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A  AL    A  +   + R       RI     K +C +MA  V   A++  GG+
Sbjct: 292 QTGVMAGRALVRDAARKWVTDEDR-------RIAPSAAKVFCTEMAGQVADLAVQIHGGT 344

Query: 423 GYIEERSIARHYRE 436
           GY+ E  + R YR+
Sbjct: 345 GYMREVPVERIYRD 358


>gi|148259637|ref|YP_001233764.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146401318|gb|ABQ29845.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 391

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D AA+ ++  +  D  Y L G K F+S +  +D ++++A+  G     +  F
Sbjct: 134 LTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATDLYLVMARSGGAGPRGISSF 192

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPV 309
           LVP+        GL +   + K+G  +  T ++ F +      F LG       ++   +
Sbjct: 193 LVPK-----DAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFRLGAEGEGFRIAMSGL 247

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++ I       S+ G + +L +A  Y   R   G  L D   ++  +AD+A ++ AA
Sbjct: 248 DGGRVNI----GACSLGGAQAALEKAQRYMGEREAFGRRLEDFQALQFRLADMATELEAA 303

Query: 370 TALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               +  A + D  ++  +   A A+ +A  T +        V   A++  GG GY+ E 
Sbjct: 304 RLFLWSAAAALDRGEADATRRCAMAKRIATDTGF-------NVANNALQLFGGYGYLAEY 356

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I +  R+   + IL G+   M L V
Sbjct: 357 GIEKIVRDLRVHQILEGTNEIMRLIV 382


>gi|116197905|ref|XP_001224764.1| hypothetical protein CHGG_07108 [Chaetomium globosum CBS 148.51]
 gi|88178387|gb|EAQ85855.1| hypothetical protein CHGG_07108 [Chaetomium globosum CBS 148.51]
          Length = 338

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 130/344 (37%), Gaps = 73/344 (21%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG--GERWDKVEFHPAWHALLRRSI 111
           +  E   LG+ VLS    +    A +N P L   G    G+   ++     W  L    I
Sbjct: 16  ISPEAGQLGDDVLSQQIFDWVTDAEHNQPHLRGSGRDAFGKPVSELVVTEGWRKLQEFGI 75

Query: 112 HDGL-------------------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             G+                    C +W+ S    +   A +  AARL L   L     +
Sbjct: 76  QKGIVALNYDSDYGPYNRLVEFIRCHLWEGSCANTLCPAAMQDGAARL-LQRHLSKETGL 134

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           SP           T  RV ++    + SR  DPT        +   G  +TE+ GG+D+ 
Sbjct: 135 SP-----------TERRVFQNAFDHLTSR--DPTK-------AWTSGQWMTERTGGSDVP 174

Query: 213 AITSQG-----------------QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
              +                   +KI  G + +SG KWF S+  S   I+LA+ +   G 
Sbjct: 175 KTETVATYDPYPDVSSTPFADVDEKILLGPWSISGFKWFSSATDSQMTILLAKTDPSKGV 234

Query: 256 -------------FLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                         + P  +  GS   G+  QRLK+ +G +S  T ELE +N  G+L+G+
Sbjct: 235 SAYFAPMRSHNPSLVSPTGIRCGSELYGVTIQRLKHNLGTQSLPTDELELNNMRGWLIGE 294

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                  +  +  +  + + + SV  M  +LA +  +A  R  S
Sbjct: 295 EGQVIREINTILTITRVHTTVSSVGYMSRALAVSKGFALIRENS 338


>gi|332525843|ref|ZP_08401984.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109394|gb|EGJ10317.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 397

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 24/256 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A++ ++ + + DG Y LSG K W  +SP++D F++ A
Sbjct: 122 PRLATGEWIGCFGLTEPDHGSDPASMATRARPV-DGGYVLSGSKMWITNSPIADVFVVWA 180

Query: 248 Q---VEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +    +G  G     R  +LE G   GL   +++ K+  R++ T E+     F   +   
Sbjct: 181 KETDAQGAAGGQEAIRGYILERGM-KGLTAPKIEGKMSLRASITGEIVMDQVF---VPAE 236

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKR 357
           N   G          L+ A   ++   +  AE   +A RR+       G  L    ++++
Sbjct: 237 NKLPGVAGLKGPFGCLNKARYGIAWGALGAAEFCWHAARRYTLERKQFGRPLAQNQLIQK 296

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  +I        R+    DE ++  E       M  + K   C  A  +   A +
Sbjct: 297 KLADMQTEITLGLQGCLRVGRLIDEGQAAPE-------MISLIKRNSCGKALDIARLARD 349

Query: 418 CIGGSGYIEERSIARH 433
             GG+G  +E  + RH
Sbjct: 350 MHGGNGIHDEFHVIRH 365


>gi|323450619|gb|EGB06499.1| hypothetical protein AURANDRAFT_60185 [Aureococcus anophagefferens]
          Length = 442

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 33/248 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + S+ +   S G Y L+G K W  ++P++D  ++ A+++G V  F+
Sbjct: 175 FGLTEPDHGSDPDGMKSKAEFDASTGEYVLNGSKHWITNAPIADVLVVWAKLDGDVRGFV 234

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP---VEDMKI 314
           + R     +P  L   +++ K   R+        S T    L D  V  GP   +   K 
Sbjct: 235 LER--SKLAPGMLETPKIEGKFSLRA--------SETGSIFLADARV--GPDAILPKAKG 282

Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALD 365
           L      L+SA   ++   +  AEA +   RR+V      G  L    ++++ +AD+A +
Sbjct: 283 LGAPFSCLNSARFGIAWGALGAAEACYDVARRYVGERSQFGAPLAANQLIQKKLADMATE 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +A     + R+    D  +   +       M  + K   C  A  V   A + +GG+G  
Sbjct: 343 LALGYGAAQRVGELKDAGQINPQ-------MLSLVKRNSCGKALDVARAARDMLGGNGIQ 395

Query: 426 EERSIARH 433
           +E  + RH
Sbjct: 396 DEYHVIRH 403


>gi|291416094|ref|XP_002724281.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase [Oryctolagus
           cuniculus]
          Length = 442

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D   + ++ +   S   Y L+G K W  +SP++D F++ A  + G +  F
Sbjct: 181 FGLTEPNHGSDPGGMETRARYNPSSKSYTLNGTKSWITNSPVADLFVVWAPCDDGLIRGF 240

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+ R        GL   R++ K   R++AT  +      G  + + NV  G         
Sbjct: 241 LIER-----GTRGLSAPRIQGKFSLRASATGMIVME---GVEVPEENVLPGATGLSAPFG 292

Query: 317 YLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  +I     
Sbjct: 293 CLNNARYGITWGVLGAAEFCLHTARQYTLDRLQFGAPLARNQLIQKKLADMLTEITLGLH 352

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              RL    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 353 SCLRLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDMLGGNGVCDEYHVI 405

Query: 432 RH 433
           RH
Sbjct: 406 RH 407


>gi|91975744|ref|YP_568403.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91682200|gb|ABE38502.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 404

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K++DG Y LSG K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTKAEKVADG-YRLSGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP   +
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEEALLPNVSGLKGPFGCL 259

Query: 313 KILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               Y +   +M  +     +  A  Y   R      L    ++++ +AD+  +IA    
Sbjct: 260 NRARYGISWGVMGAA--EDCMQRARQYTLDRKQFNRPLAATQLVQKKLADMQTEIALGVQ 317

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E  + 
Sbjct: 318 ASLRVGRLMDEGKVAPE-------MISIVKRNNCGKALDIARVARDMHGGNGIQIEYHVM 370

Query: 432 RH 433
           RH
Sbjct: 371 RH 372


>gi|328886350|emb|CCA59589.1| Methylsuccinyl-CoA dehydrogenase, predicted by [Streptomyces
           venezuelae ATCC 10712]
          Length = 401

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 37/276 (13%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  K  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAITSKAVKDGD-EYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           L +  P       GL      +K+G +   T EL        L    N   G V      
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMDG----LRIPANRVLGGVTGRGFY 249

Query: 316 IYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +D      ++V+     +A+      + YA++RH  G  +     ++  +A++A  + 
Sbjct: 250 QMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAQHQAIQFKLAEMATKVE 309

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E
Sbjct: 310 AAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKE 362

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
             I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 363 YEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|328774443|gb|EGF84480.1| hypothetical protein BATDEDRAFT_15770 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 535

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A + ++ +K  +G  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 259 ICLCITEPSAGSDVANLMTEAKKTPNGEHYIVNGEKKWITNGVFADYFTVAVRTGGPGMN 318

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            V  LL + S  G+  + +    G  ++ T  + F +       L+G  N      +  K
Sbjct: 319 GVSLLLIEKSMPGVKTRHMPCS-GVWASGTTYITFEDVKVPVKNLIGKEN------KGFK 371

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++Y      +  AI +    RV + E+I YA +R   G  LID PV++  +  +   + 
Sbjct: 372 CIMYNFNHERMGIAIQATRFARVCVEESIKYAHKRKTFGKKLIDHPVIRNKLGHMVRKVE 431

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A  A    + +   + K   E+    ++  PI         T  +C + A  +       
Sbjct: 432 ATHAW---MESLLYQTKCMPEDQQMLKLGGPIALLKVQSTQTMEFCAREAAQIFGGLSYS 488

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YRE  A +I  GS   M+
Sbjct: 489 RGGQG----EKVERLYREVRAYAIPGGSEEIMI 517


>gi|195326049|ref|XP_002029743.1| GM24928 [Drosophila sechellia]
 gi|194118686|gb|EDW40729.1| GM24928 [Drosophila sechellia]
          Length = 420

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            L+G K W  +   +D  I+ A+  G        +  F+V    E     G    +  +K
Sbjct: 185 ILNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327
           +G R ++T EL F         DL V    +   E+  + + +          A   V  
Sbjct: 240 MGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D A +RS
Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGNRS 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +     I+      +  + A  V  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403


>gi|257452716|ref|ZP_05618015.1| Acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|257466577|ref|ZP_05630888.1| Acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917732|ref|ZP_07913972.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059257|ref|ZP_07923742.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684933|gb|EFS21768.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313691607|gb|EFS28442.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 381

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 37/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI------Y 226
           W    F  E       P   +   IG  GLTE   GTD     + GQ+ +         +
Sbjct: 96  WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTD-----ASGQQTTAVFDEEKQEW 150

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F+++   +  +++ A  +   G   +   ++E G+P G    + + K+G R +
Sbjct: 151 IINGSKIFITNAGYAHVYVVFAMTDKSKGVKGISAFIIESGTP-GFSIGKKEKKLGIRGS 209

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335
           AT EL F +       LLGDL       +  KI ++ LD   + ++   + LA     EA
Sbjct: 210 ATCELIFEDVRIPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  L         +A++ + + A+  L ++ A +       + +AA A++
Sbjct: 264 VQYVKERKQFGRALSKFQNTAFQLANMEVKVEASRLLVYKAAWNESNHLPYTVDAARAKL 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  T       A  V  +A++  GG GY  E  + R  R++    I  G+
Sbjct: 324 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|189189650|ref|XP_001931164.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972770|gb|EDU40269.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 443

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 32/181 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGR--V 253
           I + +TE   G+D+A IT+  +K +DG  Y ++G  KW  +   SD   M  +  G    
Sbjct: 157 ICIAITEPEAGSDVANITTTAEKTADGKHYIINGSKKWITNGIWSDYATMAVRTSGPGPT 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
           G  +V   L+ G P G+  +R+K   GN S+ T  +E        L D+ V   PVE+  
Sbjct: 217 GLSMVVVPLK-GYP-GVSMRRIKVG-GNISSGTTFIE--------LDDVKV---PVENLV 262

Query: 312 ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                 MK ++       L  AI +    RV+L+ A+ Y  +R   G  L+DQPV++  +
Sbjct: 263 GEEGMGMKYIMTNFNHERLSIAIGATRQARVALSAAVEYVLKREAFGKPLVDQPVVRHRL 322

Query: 360 A 360
           A
Sbjct: 323 A 323


>gi|167840067|ref|ZP_02466751.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 393

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGD-RYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S             I   +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDAGGSAHVRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|121608553|ref|YP_996360.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553193|gb|ABM57342.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 412

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 31/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250
           L+E   G+D+A+I+ +  +  D  + L+G+K W   +  +D   + A+           E
Sbjct: 127 LSEPDTGSDLASISCRAVREGD-EWVLTGNKYWCTFADGADYLSLFARTSAPASAGQRGE 185

Query: 251 GRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           G + CFL+ +  E GS P G+    +  KIG     T EL        +  D  +     
Sbjct: 186 G-ISCFLIEK--ERGSFPKGMTGAPIP-KIGYFGWKTFELALDGVR--VPADCLIGAQGK 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             + +   L+ A    +   + LA+     AI YA  R   G  + +   ++  IA +A 
Sbjct: 240 AFLLMAKGLEGARAHTAARAIGLAQGALEDAIAYAGERKQFGMPIAEYQAIRFKIATMAT 299

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  L + +    D  +    EA+ A       KY+  +MA  V ++A++  GG+GY
Sbjct: 300 EIEAARQLLYYVCGEIDRGRRCDREASMA-------KYFASEMAERVTSQALQIFGGAGY 352

Query: 425 IEERSIARHYRESPANSILLGS 446
            +  ++ R++R++    I  G+
Sbjct: 353 TKLFAVERYWRDARLTKIFEGT 374


>gi|237817454|ref|ZP_04596446.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|237788267|gb|EEP62483.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
          Length = 381

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 184 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 238 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351

Query: 432 RHYRE 436
             YR+
Sbjct: 352 HFYRD 356


>gi|242210493|ref|XP_002471089.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729879|gb|EED83746.1| predicted protein [Postia placenta Mad-698-R]
          Length = 363

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 68/297 (22%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVG-- 254
           L+E   G+D  A+ ++  K  D  + L+G K W  +S  ++ F++ A V     G  G  
Sbjct: 94  LSEPASGSDAFALQTRAVKDGDH-WVLNGSKMWITNSYEAEVFLIFANVISVHNGYKGIT 152

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
           CF+  + +      G+   + + K+G R+++T  +         L DL V   P E++  
Sbjct: 153 CFIATKDM------GIQIAKKEQKLGIRASSTCLIS--------LDDLRV---PEENIIG 195

Query: 313 ----------KILIYLDSAI---------MSVSGMRVSLAE-----AIHYARRRHVSGGI 348
                     ++L+  D  I         + ++   + LA+     A+ Y  +R   G  
Sbjct: 196 KHVLRVCHTAQLLMLYDPQIAIECLNEGRIGIAAQMLGLAQGAFDKAVPYTYQRTQFG-- 253

Query: 349 LIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
              QPV     +    A  A++I AA  L++  A   +E K  + EAA A++ A      
Sbjct: 254 ---QPVGTFQGLAFQQARAAMEIEAARLLTYNAARRKEEGKPFAREAAMAKLYAS----- 305

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++A  V   A+E  GG G+  E  I +++R+S   +I  G+ N  +  +  L++K
Sbjct: 306 --EVAQRVSGAAIEWAGGVGFTRETGIEKYWRDSKIGAIYEGTSNIQLQTIAKLIQK 360


>gi|33316727|gb|AAQ04622.1|AF443184_3 acyl CoA dehydrogenase [Paracoccidioides brasiliensis]
          Length = 415

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 43/278 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 139 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 198

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            +  LL + S  G+  +++  + G  ++ T  + F         D+ V   PVE++    
Sbjct: 199 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFE--------DVKV---PVENLIGKE 246

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 247 NQGFKVIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 306

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIA 413
           A  I A+      L N   + +S  +  A  R+   I         T  +C + A  +  
Sbjct: 307 ARQIEASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFG 363

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 GG G      I R YR   A +I  GS   M+
Sbjct: 364 GLSYTRGGQG----EKIDRLYRNVRAYAIPAGSEKIML 397


>gi|328783450|ref|XP_393211.4| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 414

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 32/273 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  ++ +  +K  DG  Y +SG K W  +S +++ F++ A      G   + 
Sbjct: 157 LTEPGSGSDAFSLKTIAKK--DGSDYVISGTKMWISNSDIAELFLVFANANPSAGYRGIT 214

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDM 312
               +    GL   + ++K+G +++ T  + F N         G        + G     
Sbjct: 215 TFFVERDTPGLTIAKPEDKLGIKASGTCMIHFDNVRVPEDNILGHFGHGYKYAAG----- 269

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               +L+   + +    + +A+      I Y   R   G  +     M+  IA +  ++ 
Sbjct: 270 ----FLNEGRIGIGAQMIGIAQGCLDATIPYTLERKQFGKDIFSFQSMQHQIAQVVTELE 325

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L +  A   D  K   +EAA A+ +A  T       A  V A+ ++ +GG G+  +
Sbjct: 326 SARLLVYNAARLVDIKKDVMKEAAMAKFVASET-------ALRVTAKCIDFMGGVGFTTD 378

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               +++R+S   +I  G+ N  +  +   + K
Sbjct: 379 FPQEKYFRDSKIGTIYEGTSNMQLSTIAKCIRK 411


>gi|254487803|ref|ZP_05101008.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044672|gb|EEB85310.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 407

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 29/245 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCF 256
            GLTE   G+D A + ++  K + G   +    W  ++P++D F++ A+ E   G++  F
Sbjct: 149 FGLTEPDAGSDPAGMKTRAIKTATGYKLIGSKMWISNAPIADVFVVWAKSEEHGGKIRGF 208

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           ++ + ++     GL   ++ NK+  R++ T E+   N       LL  +    GP     
Sbjct: 209 ILEKGMK-----GLTAPKVGNKLSLRASITGEIVMDNVEVGEDALLPHVQGLKGP----- 258

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAA 368
               L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA 
Sbjct: 259 -FGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKKLADMQTEIAL 317

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               S ++    D AK+  E       M  I K   C  A  +   + +  GG+G   E 
Sbjct: 318 GLQASLQVGRLMDAAKAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISGEY 370

Query: 429 SIARH 433
            + RH
Sbjct: 371 QVIRH 375


>gi|86156788|ref|YP_463573.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773299|gb|ABC80136.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 591

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L G K F+++   ++ F + A+V+ +    FLV
Sbjct: 146 LTEPEAGSDAMGGKATATLSPDGKHYLLDGTKQFITNGSFANLFTVFAKVDRKHFTAFLV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G + ++T  + F +       +LG+  +  G      +L
Sbjct: 206 ERTF-----PGVTVGPEEKKLGIKGSSTTSVIFESAKVPVENVLGE--IGKGHKIAFNVL 258

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  +++LA    YA  R   G  +     ++  +AD A  + A+ +
Sbjct: 259 NVGRFKLGAAVTGAA--KLALATGAAYANARKQFGTPIARFGAIREKLADQAAGVYASES 316

Query: 372 LSFRLANSFDE--AKSRSEEAAYAR----------IMAPITKYWCCKMAPAVIAEAMECI 419
           L +RLA   D+  A   +E+  Y            I   I K +C ++   V+ E ++  
Sbjct: 317 LIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYAIECAIAKVFCSEVLADVVDEVVQIH 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G+I+E    ++YR+   N I  G+
Sbjct: 377 GGYGFIQEYPAEKYYRDERINRIFEGT 403


>gi|89100481|ref|ZP_01173343.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89084824|gb|EAR63963.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 379

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 50/270 (18%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255
            GLTE   G+D     TS  +K  DG + ++G K ++++      + +  V G  G    
Sbjct: 123 FGLTEPNAGSDAGGTRTSAAEK--DGEFIINGSKCYITNASYAKHLAITAVTGGSGADKE 180

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
               +VP   E        ++ + N  K+G        L  SNT   ++ D+ V   P E
Sbjct: 181 ISAIIVPTDAEG-------FKVIDNYEKMG--------LNASNTTELVMEDVRV---PTE 222

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
            +         + LI LD   + +  M V +A+A     + YA+ R   G  L     ++
Sbjct: 223 HLLGKKGEGFKQFLITLDGGRIGIGAMAVGIAQAAYEKALQYAKERTQFGRSLSQFQAIQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I  A  + ++ A   D+ K  ++EA+       + K +  ++   V  +A+
Sbjct: 283 FKLADMAMKIELARNMVYKAAWLKDQGKPFTKEAS-------MCKLYASEICMEVADQAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+++  + R+ R+     I  G+
Sbjct: 336 QIHGGYGYMKDYHVERYMRDGKLTEIGEGT 365


>gi|126652587|ref|ZP_01724751.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126590578|gb|EAZ84695.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 378

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGC 255
           LTE   G+D  ++ S+  +  D  Y ++G K F+++   +D +I+ A  +       +  
Sbjct: 124 LTEPGAGSDAGSLQSKAVRDGDE-YVINGSKVFITNGGEADVYIVFASTDPAEKTKGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F+V    E G+P GL   + ++K+G   + TV+L F N       LLG+        E  
Sbjct: 183 FIV----EKGTP-GLIIGKDEHKMGLHGSRTVQLTFDNCRIPADNLLGEEG------EGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +AEA   A     + R   G  ++ Q  +   +AD+A  +
Sbjct: 232 KIAMANLDVGRIGIAAQSLGIAEAALEAATAYAKERVQFGKPIVAQQGVSFKLADMATAV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++  L +R AN   +      EA+ A++ A        + A     EA++  GG GY E
Sbjct: 292 ESSKLLVYRAANLRAKGLPCGAEASMAKLFA-------SRTAVQTAIEAVQVFGGYGYTE 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R++R++    I  G+
Sbjct: 345 DYPVERYFRDAKVTEIYEGT 364


>gi|187479839|ref|YP_787864.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424426|emb|CAJ50979.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 392

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMRLRAEKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 187 TAFLIEKGFKGFSIAQKLDKLGMRGSHTGELVFQDCEVPAENILGQLN---GGVKVLMSG 243

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S   +  M+  +  A+ Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERAVLSGGPLGIMQAVMDVAVPYVHDRKQFGQAIGEFQLIQGKMADMYTTLQASRAF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D  +   E     R        +  + A  +  E ++ +GG+GYI E  + R
Sbjct: 304 CYTVGKNLD--RLGREHVRQVRKDCAALILYTAERATWMAGEGIQLLGGNGYINEYPVGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 LWRDAKLYEIGAGT 375


>gi|113867952|ref|YP_726441.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526728|emb|CAJ93073.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 393

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 22/285 (7%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              IG L ++E   G+D+ ++  + +   D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAEFKGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++ A+ E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYAKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341
            T EL F +    +   L V  G  + +   +  + A++S   V  M+  +     Y   
Sbjct: 214 HTGELVFQDVEVPVENILGVENGGAKVLMSGLDYERAVLSGGPVGIMQACMDVVTPYIHD 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +AD+   + AA +  + +  + D   S           A I  
Sbjct: 274 RKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYTVGKNLDALGSGHVRQVRKDCAAVI-- 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  E ++ +GG+GYI E    R +R++    I  G+
Sbjct: 332 LYTAEKATWMAGETVQILGGNGYINEYPAGRLWRDAKLYEIGAGT 376


>gi|326328574|ref|ZP_08194914.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953535|gb|EGD45535.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 617

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 51/295 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC- 255
           LTE   G+D+ A  +      DG + ++G K F++S  SD       ++LA+ +G  G  
Sbjct: 164 LTEPDAGSDVGAGKTFATPNEDGSWNITGVKRFITSAESDLQENIMHLVLARPKGVEGVG 223

Query: 256 ---------FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN------ 293
                    FLVP+   D       G  NG     +++K+G + + T EL F +      
Sbjct: 224 GPGTKGLSLFLVPKYHFDHETGELTGERNGAYVTNVEHKMGIKVSNTCELTFGDPQVGGG 283

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               G+LLG+++     + D+     +     +++ +      A+ YA+ R V G  L  
Sbjct: 284 EPAKGWLLGEVHDGIRQMFDVIENARMMVGTKAIATLSTGYLNALEYAKTR-VQGADLTK 342

Query: 352 ------------QPVMKRAI---ADIALDIAA----ATALSFRLANSFDEAKSRSEEAAY 392
                        P ++R++      A  + A     T+   ++  + D +      AA 
Sbjct: 343 AAKTDPRVTITHHPDVRRSLLVQKSFAEGMRALVYYTTSWQEKVVLTEDGSDENKLAAAV 402

Query: 393 ARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             ++ PI K +  + A  ++  E+++  GGSG+++E  I ++ R++  +SI  G+
Sbjct: 403 NDLLLPIVKGYGSERAWTLLGTESLQTFGGSGFLQEYPIEQYVRDAKIDSIYEGT 457


>gi|284029016|ref|YP_003378947.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808309|gb|ADB30148.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 384

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 33/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           L+E + G+DI+A+T++  +  D  Y L+G K W      +D +   A+        +  F
Sbjct: 127 LSEPQAGSDISAMTTKAVRDGDE-YVLTGTKAWITHGSQADFYTTFARTSADAKHGISAF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            VP      S +GL +   + K+G   + T  + +         L+G         + M+
Sbjct: 186 HVP-----ASTDGLSFGAPERKMGLTGSTTTLVNYDRVRVPAAHLIGAEG------DGMR 234

Query: 314 I-LIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  LDS  + ++   V LA+A           R   G  + D   ++  +AD+A  + 
Sbjct: 235 IALSALDSGRLGIAACAVGLAQAALDCAAAYALERKQFGHAIADFQGLQFLLADMAAAVE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A A   + A   D  +  +++AA A+++       C   A  V  +A++ +GG GY  +
Sbjct: 295 SARATYLQAARRRDLGRPFTQQAAIAKLV-------CTDAAMKVTTDAVQVLGGYGYTRD 347

Query: 428 RSIARHYRESPANSILLGS 446
               R+ RE+    I  G+
Sbjct: 348 FPAERYMREAKVTQIFEGT 366


>gi|154344857|ref|XP_001568370.1| acyl-CoA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065707|emb|CAM43480.1| putative acyl-CoA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 421

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  A+ ++  K     + ++G K F+++   +  ++++A V+   G     C
Sbjct: 153 LTEASSGSDAFALKTRATK-KGSKWIINGSKLFITNGGWAGIYLVMATVDSSKGYKGITC 211

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V    +     G+   R ++K+G R+++T EL F N     + + NV     +  KI 
Sbjct: 212 FVV----DSSETPGVSVVRTEDKLGIRASSTAELRFENV---EVPEENVVGEVGKGYKIA 264

Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           I  L+   + +    + +A+      + Y  +R   G  + D   M+   A+ A+++ AA
Sbjct: 265 INILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQFGKAIGDFQGMQMQYAECAMELHAA 324

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +         ++  ++AA A       KY+   +A    + A+E  GG G++++  
Sbjct: 325 RLMVYNACRKKQNNETFIQDAAMA-------KYFASVVAEKTASRAVEWAGGIGFMKDFG 377

Query: 430 IARHYRESPANSILLGS 446
           + R YR++   +I  G+
Sbjct: 378 LERFYRDAKIGAIYEGT 394


>gi|148553745|ref|YP_001261327.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498935|gb|ABQ67189.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 394

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++  K ++G Y LSG+K W  ++P++D F++ A+    +G++  
Sbjct: 137 FGLTEPDAGSDPGGMRTRAVK-TEGGYRLSGNKTWISNAPIADVFVVWAKSDAHDGQIRG 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G+  GL   +++ K+  R++ T  +   +       LL ++    GP    
Sbjct: 196 F----VLEKGA-KGLSAPKIEGKLSLRASITGMINLDDVEVGEDALLPNVQGLKGP---- 246

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  DI+
Sbjct: 247 --FGCLNRARYGISWGALGAAEFCFHAARQYGLDRKQFGRPLAATQLYQKKLADMLTDIS 304

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE +       +A  M  I K      A  +  +A +  GG+G  EE
Sbjct: 305 LGLQASLRVGRLMDEGR-------FAPEMVSIVKRNNVGKALDIARQARDMHGGNGISEE 357

Query: 428 RSIARH 433
             + RH
Sbjct: 358 YQVIRH 363


>gi|62317913|ref|YP_223766.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269889|ref|YP_419180.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189023163|ref|YP_001932904.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|254690603|ref|ZP_05153857.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254699201|ref|ZP_05161029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732646|ref|ZP_05191224.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256255783|ref|ZP_05461319.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260545145|ref|ZP_05820966.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756175|ref|ZP_05868523.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260760456|ref|ZP_05872804.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260763697|ref|ZP_05876029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260881999|ref|ZP_05893613.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297249154|ref|ZP_06932855.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|18092573|gb|AAL59348.1|AF454951_26 putative acyl-CoA dehydrogenase [Brucella abortus]
 gi|62198106|gb|AAX76405.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82940163|emb|CAJ13213.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           domain:Acyl-CoA dehydrogenase, N-terminal [Brucella
           melitensis biovar Abortus 2308]
 gi|189021737|gb|ACD74458.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260098416|gb|EEW82290.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670774|gb|EEX57714.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260674118|gb|EEX60939.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676283|gb|EEX63104.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260871527|gb|EEX78596.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297173023|gb|EFH32387.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 380

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|15966004|ref|NP_386357.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307314889|ref|ZP_07594480.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15075274|emb|CAC46830.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306898926|gb|EFN29574.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 386

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           L +TE   G+D+  +    +   D  + ++G K F+S      F+++    G        
Sbjct: 122 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 180

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++ CFLV R    G+P G   +   N + +R      L F +       +LG+++   
Sbjct: 181 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHKGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D      L  A  SV   R +   A+ YA  R   G  +     +   +AD+  +I
Sbjct: 236 DIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQGVSFKLADMITEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A   D+    + E A A++ A        +M   V  EA++  GG G ++
Sbjct: 296 DAADLLTLSAAWRLDQGLPSNREIASAKVFA-------TEMLARVTDEAIQIYGGMGLMD 348

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 349 DLPLARFWRDARVERIWDGT 368


>gi|85703226|ref|ZP_01034330.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672154|gb|EAQ27011.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 387

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G K W  + P +D  ++ A+     G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YKLNGSKYWITNGPDADTLVVYAKTNPDAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              L + +  G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVDVPFENVLGEEGRGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+       L E + Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLAERKQFGQAIGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370


>gi|324514843|gb|ADY46005.1| Isovaleryl-CoA dehydrogenase [Ascaris suum]
          Length = 415

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 114/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +KI D  Y L+G K W  + P +D  I+ A+       + +
Sbjct: 155 LAMSENGSGSDVVSMRLRAEKIGDQ-YVLNGTKFWITNGPDADVLIVYAKTNPAKNQYGI 213

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G       +K+G R + T EL F+N +     +LG+++          ++
Sbjct: 214 TAFIIEKDFEGFSASPKLDKMGMRGSNTSELVFNNCYVPEENVLGEIDKGV-----YVLM 268

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++G  + L +     A  YA  R   G  +    +++  +AD+   + A  
Sbjct: 269 TGLDVERLVLAGGPLGLMQAACDIAFDYAHHREAFGSKIGTFQLIQGKMADMYTTLNACR 328

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D+    +++ A   +       +  + A  +  +A++ +GG+GYI +   
Sbjct: 329 SYLYNVARATDDGYLTNKDCAGVIL-------YLAEHATKLCLDAIQILGGNGYINDYPT 381

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 382 GRFLRDAKLYEIGAGT 397


>gi|296165498|ref|ZP_06848029.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899139|gb|EFG78614.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 384

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 34/264 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFL 257
           + LTE  GG+D+ ++T+    +SDG  + ++G K ++S+      I +L + + +     
Sbjct: 122 MALTEPGGGSDLQSMTT--TAVSDGDDFVVTGAKTWISNARRSGLIALLCKTDPKA---- 175

Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
            PR      LL +  P GL   R   K+G +   + EL F    G+ + +  +  G P +
Sbjct: 176 TPRHTGISILLVEPGP-GLTISRDLPKLGYKGVESCELSFD---GYRVAESAILGGVPGK 231

Query: 311 DM-KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              +++  L++  + V+   + +A     +A+ Y+++R   G  +     +   +AD+A 
Sbjct: 232 GFSQMMKGLETGRIQVASRALGVATAALEDALAYSQQRESFGQPIWKHQAIGHYLADMAT 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L+   A+ +D  +    EA  A++ A  T       A  +   A+   GG GY
Sbjct: 292 KLTAARQLTLYAADRYDSGERTDMEAGMAKLFASET-------AMEIALNAVRIHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGN 448
             E  + R++R++P   +++G G 
Sbjct: 345 STEFDVERYFRDAPL--MIVGEGT 366


>gi|313231598|emb|CBY08712.1| unnamed protein product [Oikopleura dioica]
          Length = 413

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 35/282 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253
           LG++E   G+D+A I +  +   D  Y ++G K W  +   +D   +LA   +G V    
Sbjct: 149 LGVSEVHAGSDVAQIKTTAKSDGDD-YIINGQKMWITNGIQADWCCLLANTSDGPVHKSK 207

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
               VP  L      G+   +   KIG  S+ T +L F +      +++G+    +G + 
Sbjct: 208 SLICVPMDLP-----GVIRAKKIEKIGMWSSDTAQLWFEDVRVPKKYIIGE--EGSGFIY 260

Query: 311 DM-----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            M     + +  + SAI   SG+   + E I+Y R R   G  ++D   +   +A++  +
Sbjct: 261 QMIQFQQERIFAMASAI---SGLENCINETINYTRERQAFGKSVLDNQYIHFQLAELQTE 317

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL +R+   +   +  ++       +A + K    ++   V  + ++  GG GY 
Sbjct: 318 VELLRALLYRVTAMYVNGEDATK-------LASMGKLKTGRLIREVADKCLQMWGGMGYT 370

Query: 426 EERSIARHYRESPANSILLGSGNAM---VLDVLNLLEKGTNL 464
            E  +++ +R+    S+  G+   M   +  ++++L KGT L
Sbjct: 371 LENPVSQQFRDGRLASVGGGADEIMLQIICKLMDILPKGTKL 412


>gi|307303547|ref|ZP_07583301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|307318602|ref|ZP_07598035.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306895629|gb|EFN26382.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306902938|gb|EFN33530.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 395

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D A + ++  K   G   +    W  ++P++D F++ A+ E      +  
Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316
            +LE G+  GL   ++  K+  R++ T E+   N   G   LL ++    GP        
Sbjct: 196 FVLEKGA-KGLSAPKIGGKLSLRASITGEIVLDNVEVGEEALLPNVEGLKGP------FG 248

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA    
Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE +   E       M  I K   C  A  +   A +  GG+G  EE  + 
Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361

Query: 432 RH 433
           RH
Sbjct: 362 RH 363


>gi|282859245|ref|ZP_06268366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282587978|gb|EFB93162.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 568

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 24/290 (8%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
            + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G   
Sbjct: 170 TMSMDLTEPDAGSDLQRVMLKASFDEKEKCWRLNGVKRFITNGDSDIHLVLARSEEGTKD 229

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   + D    G+  + +++K+G   + T EL + N    L G  +   G ++ +  
Sbjct: 230 GRGLSMFIYDKREGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMA 287

Query: 315 LI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L+    L  A  SV   + +  EA+ YA+ R   G  +I+ P +   ++ +   + A  +
Sbjct: 288 LMNGARLGIAAQSVGVSQEAYNEALAYAKDRAQFGKKIINMPPVYDMLSRMKAKLDAGRS 347

Query: 372 LSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAE 414
           L ++ A   D  K+              R E   Y R+     PI K    +       +
Sbjct: 348 LLYQTARYVDIYKALEDIARDEKLSPEERQEMKKYTRLADAFTPIAKGMNSEYVNQNAYD 407

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +   GGSG+I E    R +R++   SI  G+    V+  +  +  GT L
Sbjct: 408 GISVHGGSGFIMEYKCQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457


>gi|148554914|ref|YP_001262496.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148500104|gb|ABQ68358.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 390

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 35/271 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRV 253
           + + ++E   G+D+ A+ +  ++  D  Y ++G K F+S+    + I++A       G  
Sbjct: 129 LAVAMSEPGAGSDLQAMKTSARREGDH-YVINGQKTFISNGAHASLIIVAAKTDPEAGAR 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
           G  L    +E     G    RL +KIG     T EL FS       N  G   G   +  
Sbjct: 188 GLSLFA--VETDEVEGFTRGRLLDKIGQEGRDTAELFFSDMRVPVENRIGPEGGGFAMLM 245

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +   +++I    A  +++ M  ++   I Y   R   G  ++D    +  +A+     
Sbjct: 246 EKLPQERLVI----AWQALAMMEAAIDHTIAYTAERRAFGRAVLDFQNSQFKLAECKTQA 301

Query: 367 AAATAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             A           LA + D A             A + KYW  +    VI E ++  GG
Sbjct: 302 TIARVFLDHCTQQLLAGTLDAAT------------ASMAKYWITEAQGKVIDECLQLFGG 349

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GY+ E  IA  Y+++    I  G+   M L
Sbjct: 350 YGYMTEYPIAEMYKDARVFRIYGGTSEIMKL 380


>gi|315126581|ref|YP_004068584.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913]
 gi|315015095|gb|ADT68433.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913]
          Length = 385

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCF 256
           LTE   G+D A++ ++  +  D  Y ++G K F+S +  ++  +++A+      G +  F
Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEILVVMARTGADGPGGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP        +G+ Y + + K+G  +  T  + F +     +   N+     E  K  +
Sbjct: 183 VVP-----ADASGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAANLLGQEGEGFKFAM 234

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+   + +L  A  Y + R   G  L     ++  IAD+  ++ AA 
Sbjct: 235 QGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFKIADMNTELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  RLA +F    + SE+  Y      + K +   +   V  +A++  GG GYI+E  +
Sbjct: 295 QM-VRLA-AFKLDTNDSEKTTYC----AMAKRFATDVGFTVCNDALQIHGGYGYIKEYPL 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            RH R+   + IL G+   M
Sbjct: 349 ERHVRDVRVHQILEGTNEIM 368


>gi|16264595|ref|NP_437387.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|15140733|emb|CAC49247.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
          Length = 395

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D A + ++  K   G   +    W  ++P++D F++ A+ E      +  
Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316
            +LE G+  GL   ++  K+  R++ T E+   N   G   LL ++    GP        
Sbjct: 196 FVLEKGA-KGLSAPKIGGKLSLRASITGEIVLDNVEVGEEALLPNVEGLKGP------FG 248

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +IA    
Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+    DE +   E       M  I K   C  A  +   A +  GG+G  EE  + 
Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361

Query: 432 RH 433
           RH
Sbjct: 362 RH 363


>gi|311109069|ref|YP_003981922.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763758|gb|ADP19207.1| acyl-CoA dehydrogenase, N-terminal domain protein 24 [Achromobacter
           xylosoxidans A8]
          Length = 389

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 23/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253
           LG++E   G+D+A++ +  +K  D  Y +SG K W  ++  +D   +LA           
Sbjct: 122 LGVSETGAGSDVASLKTTARKDGDD-YVISGSKMWITNATQADWMCLLANTSDDKPHRNK 180

Query: 254 GCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
               +P   E+G P  G+   ++K K+G  S+ T ++ F        + +G+  +  G  
Sbjct: 181 SLICLPLKQENGKPVPGVTMNKIK-KVGMWSSDTAQVFFDEVRVPQRYRIGEEGM--GFT 237

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+      L  A   V+ +   + + I Y R+R V G  L+D   +   +A++  ++ 
Sbjct: 238 YQMRQFQEERLSGATRRVTALGDVINDTIDYTRQRLVFGKPLLDNQAVHFRLAELKTEVE 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A+ +R A    +    +E A+ A++ A        ++   V    ++  GG G+  E
Sbjct: 298 MLRAMVYRAARVHMDGGDMTELASMAKLKAG-------RLCREVTDSCLQYWGGMGFTWE 350

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
            +++R +R+    SI  G+   M+
Sbjct: 351 NAVSRAWRDLRLISIGGGADEIML 374


>gi|167573231|ref|ZP_02366105.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 398

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  +  Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGE-RYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   I Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            + +    D   + S   A+ R +    A +  Y   K A  +  EA++ +GG+GYI E 
Sbjct: 305 LYAVGRHLDAGGTASAGGAHVRQVRKDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEY 363

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 364 PVGRLWRDAKLYEIGAGT 381


>gi|121610468|ref|YP_998275.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121555108|gb|ABM59257.1| Butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 386

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 35/301 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    TP V   W P +   E   +               LTE   G+D AA+T++ ++
Sbjct: 96  MLGRWATPAVRDHWGPLLTRGEKLAS-------------YCLTEPGAGSDAAALTTRAER 142

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +    Y ++G K F+S   S   ++L    G  G   +          G+ Y + + K+G
Sbjct: 143 VGSD-YVINGSKAFISGAGSTDMLVLMARTGAAGAGGISAFAVPADTPGISYGKKERKLG 201

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI 336
             S  T  +           LLG +       E  KI +  LD   ++++   V  A+  
Sbjct: 202 WNSQPTRSIGLEQLRIPAEHLLGRVG------EGFKIAMQGLDGGRINIASCSVGAAQGA 255

Query: 337 HYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
             A R+++       QP+     ++  +AD+A ++ AA  +    A+  D        A 
Sbjct: 256 LQAARQYMQQRRQFGQPLASFQALQFKLADMATELVAARQMVRLAASKLDTG------AP 309

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A     + K +   +  AV  EA++  GG GYI E  I R  R++  + IL GS   M 
Sbjct: 310 DASTYCAMAKRFATDIGFAVCNEALQLHGGYGYIREYPIERLLRDTRVHQILEGSNEIMR 369

Query: 452 L 452
           L
Sbjct: 370 L 370


>gi|327295096|ref|XP_003232243.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326465415|gb|EGD90868.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 435

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + +    G    + + K+G R+++T  L F +       LLG+        +  K  I 
Sbjct: 235 FVVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288

Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            L+   + ++     LA       A +    R   G ++     M+  +A    +IAAA 
Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E   
Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R+S   +I  G+ N  +  +   L+K
Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|295695810|ref|YP_003589048.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411412|gb|ADG05904.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 395

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 41/258 (15%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------RVGCFLVPR 260
           G+D   + +  ++  DG + + GHKWF +     AF ++  V         R   F+V  
Sbjct: 138 GSDPTLLRTTARRDGDG-WVIDGHKWFATGGSRAAFFIVMAVTDPDADPHRRASMFIV-- 194

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
             E G+P GL   R    +G+      EL F N              GF L  L +  G 
Sbjct: 195 --EAGTP-GLEIVRDVPVMGDTLGGHTELWFRNCRIPGENLLGEVGDGFRLAQLRLGPGR 251

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +           A+  +  MR S    + Y +RR   G  L D   ++  IA+   DI  
Sbjct: 252 IT---------HAMRWIGVMRRSFEMMLDYVQRRETRGQKLADFQTVQNDIAESYADIET 302

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L+   A   D+          AR    + K++       VI  A++  G  G+ ++ 
Sbjct: 303 SRFLTLHAAWKMDQGLD-------ARKEISLIKFYGANALHRVIDRAIQVHGALGFSKDT 355

Query: 429 SIARHYRESPANSILLGS 446
            +   YRE+ A  I  G+
Sbjct: 356 PLEGFYREARAARIYDGA 373


>gi|89899798|ref|YP_522269.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89344535|gb|ABD68738.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 382

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 40/270 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255
           + +TE   G+D+  I ++  +  +G Y ++G K F+S+      +++       +G  G 
Sbjct: 126 IAMTEPGTGSDLQGIRTRADRSGEG-YVINGAKTFVSNGFLAGLVLVVAKTDTSQGARGT 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------------GF--LLG 300
            ++  ++E  +  G    R+ +K+G ++  T EL F +               GF  L+G
Sbjct: 185 SIL--IVETQNCPGYRVGRVLDKMGLKAQDTSELFFDDVHVASDQLLGGKEGSGFFQLMG 242

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           DL     P E M I       + +++ M  +    + Y R R   G  + D    K  +A
Sbjct: 243 DL-----PYERMVI------GVTALAAMEGAYQVTLDYVRGRKAFGQTIADFQNTKFRLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +IA +I    A   R     D    R + A      A + K W  +    V+   ++  G
Sbjct: 292 EIATEIKVGRAFIDRCVE--DLVAGRLDTAT-----ASMAKLWGSEAQGRVVDICVQLFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  I+R Y ++    I  G+   M
Sbjct: 345 GYGYMNEYLISRMYTDARVQRIYGGTSEIM 374


>gi|85709279|ref|ZP_01040344.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687989|gb|EAQ27993.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 381

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 38/270 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256
           LTE   G+D AA+ +  ++  D  Y L+G K F+S   S+   +     G  G     C 
Sbjct: 126 LTEPSSGSDAAALKTTAKRDGDH-YILNGTKQFISGAGSNEVYVAMVRTGEDGPKGITCM 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
           ++ +  E     G+ +   + K+G  S  T +L        +L D+     N+  G  E 
Sbjct: 185 VIEKDFE-----GVSFGANEKKLGWHSQPTAQL--------ILEDVRVPVENLVGGEGEG 231

Query: 312 MKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +I ++ LD   +     S+ G +  L EA+ Y + R   G  + +    +  +AD+A D
Sbjct: 232 FRIAMMGLDGGRLNIGACSLGGAQRCLDEAVRYTKERSQFGKPVAEFQNTQFTLADMATD 291

Query: 366 IAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + AA AL +  A    E A  ++  +A A+ +A            +V+  A++  GG GY
Sbjct: 292 LEAARALLYLAAAKVTENAPDKTRFSAMAKRLA-------TDNGSSVVDRALQLHGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           +++  I R +R+   +SIL G+   M + V
Sbjct: 345 LQDYPIERFWRDLRVHSILEGTNQIMRMVV 374


>gi|328771128|gb|EGF81168.1| hypothetical protein BATDEDRAFT_36810 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 428

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +   K  D  Y L+G K F+S +  S+ +++LA+  G     + CF
Sbjct: 161 LTEPNSGSDAASLLTTAVKKGDS-YILNGTKAFISGAGESEIYVILARTGGPGPKGISCF 219

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309
           +V    E G+P GL + + + K+G  S+ T  +   +     G L+G      N++T  +
Sbjct: 220 VV----EKGTP-GLSFGKKERKVGWNSSPTRAVILEDCAIPVGNLIGQEGRGFNIATLAL 274

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              ++ I    A   + G + +L   + Y   R   G  L     ++  +A++A  +  +
Sbjct: 275 NIGRMNI----AACGLGGAQAALETTVEYVNDRKQFGKPLSANQSVQFKLAEMATQLTTS 330

Query: 370 TALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +    A   D  + S    AA A+I A      C ++A     +A++  GG GY+++ 
Sbjct: 331 RLMIREAARQIDINSPSAPSWAAMAKIHATDN---CFELA----NDALQLHGGYGYLKDY 383

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + ++ R+   + IL G+   M
Sbjct: 384 KVQQYMRDLRVHQILGGTNQIM 405


>gi|226228678|ref|YP_002762784.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091869|dbj|BAH40314.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 392

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 18/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D AA+    ++  +  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 131 FALSEPDSGSDAAALQCAARRDGED-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
              + D    GL      + I     A ++        S   G       ++   ++  +
Sbjct: 190 SAFIVDADTAGLEIAERIDVIAPHPLARLQFTSCRVPASQRIGAAGEGFKLAMRTLDVFR 249

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             +    A  ++   R +L EA+     R + GG+L D  + + ++A++A  I +A  L+
Sbjct: 250 TSV----AAAALGFARRALDEALARVTTRRMFGGVLADLQLTQSSLAEMATTIDSAALLT 305

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ +  + EAA A       KY   + A  VI  A++  GG G + +  + R 
Sbjct: 306 YRAAWQRDQGQPVTREAAMA-------KYVATEGAQRVIDAALQLWGGMGVVHDVPVERL 358

Query: 434 YRESPANSILLGSGNAMVL 452
           YRE  A  I  G+     L
Sbjct: 359 YREIRALRIYEGASEVQQL 377


>gi|218295367|ref|ZP_03496180.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243999|gb|EED10525.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 378

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D  ++ ++  +  D  Y L G K F+S + +++ FI+ A+ +   G      
Sbjct: 120 LTEPEAGSDAGSLKTRAYRDGD-FYVLEGQKTFISHANVAEVFIVFAKTDPDQGSKGISA 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLV R       +G+    LK K+G R+ A   + F +        L    G  E  KI 
Sbjct: 179 FLVER------QDGVRTTPLKGKLGLRA-ADTGMVFLDGVRIPRDRLLGQEG--EGFKIA 229

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LD+  +S++   V L +     ++ Y + R   G  +    +++  +A++ LD+ A+
Sbjct: 230 LSTLDTGRISLAAGAVGLMQRALDLSLAYVKERRQFGRPIASFQLIQEKLAEMKLDLEAS 289

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+++        +  + EA+ A++ A        + A  V   A++  GG G+ EE  
Sbjct: 290 RLLTYQAVWKKLSGERYTLEASMAKLFA-------SEAANRVAYRAIQVHGGYGFFEEYE 342

Query: 430 IARHYRES 437
           +AR YR++
Sbjct: 343 VARLYRDA 350


>gi|226958414|ref|NP_001152980.1| isovaleryl-CoA dehydrogenase, mitochondrial isoform 2 precursor
           [Homo sapiens]
 gi|119612820|gb|EAW92414.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_b [Homo sapiens]
 gi|193783817|dbj|BAG53799.1| unnamed protein product [Homo sapiens]
          Length = 396

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 120 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 164

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 165 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 221

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +       +LG  N     +     L  L  A   +  M+  L   I Y   
Sbjct: 222 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   +      
Sbjct: 282 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 335

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  V  + ++C GG+GYI +  + R  R++    I  G+
Sbjct: 336 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 379


>gi|332020079|gb|EGI60525.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 416

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 32/273 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D  ++ ++ +K  DG+ Y ++G K W  +S ++  FI+ A  +   G   + 
Sbjct: 159 LSEPGSGSDAFSLKTEAKK--DGVEYVINGTKMWISNSDVAQIFIIFANADPAAGYRGIT 216

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL----NVSTGPVEDM 312
             L D    GL   + ++K+G +++ T  + F N       LLG        + G     
Sbjct: 217 AFLVDRDTPGLKVDKCEDKMGLKASGTCMVHFDNVRIPKDNLLGKFGHGYKYAAG----- 271

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               +L+   + +    + +A+      I Y   R   G  +     ++  IA    ++ 
Sbjct: 272 ----FLNEGRIGIGAQMIGIAQGCLDATIPYTLERKQFGQEIFSFQSLQHQIAQAVTELE 327

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L +  A   +  K   +EAA A++ A  T       A  + A+ ++ +GG G+  +
Sbjct: 328 CARLLVYNAARLVEAKKDVVKEAAMAKLFASET-------ACRITAKCIDFMGGVGFTTD 380

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               ++YR+    +I  G+ N  +  +   + K
Sbjct: 381 FPQEKYYRDVKIGTIYEGTSNMQLSTIAKCIRK 413


>gi|241766348|ref|ZP_04764234.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363513|gb|EER58968.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 446

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 15/257 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D+ AI +  ++  D  Y ++G K F+S+    D  ++ A+ +   G   V
Sbjct: 188 IGMTEPGAGSDLKAIRTTAKRDGD-HYVINGSKIFISNGQHCDLLVLAAKTDPAAGAKGV 246

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              L D    G    +   KIG  +  T EL F++       LLG +    G V+ M+ L
Sbjct: 247 SLFLVDTKAPGFTRGQNLEKIGQHAGDTSELFFNDLRVPADALLGGVE-GQGFVQMMREL 305

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L   + +V G + +L   + Y + R   G  +      +  +A  A DIAAA A  
Sbjct: 306 PRERLIIGVQAVHGAKGALDATVKYVQERQAFGQAVAQFQNTRFTLAQCASDIAAAEAFL 365

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                +++  +   E  +         K    ++   V    ++  GG GY+ E  I+R 
Sbjct: 366 TMSVAAYERGELTPEAVS-------ALKLHTTEVFGRVADACLQLFGGYGYMAEYPISRF 418

Query: 434 YRESPANSILLGSGNAM 450
           + ++    I  G+   M
Sbjct: 419 WTDARVLRIYGGTSEIM 435


>gi|261203511|ref|XP_002628969.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239586754|gb|EEQ69397.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239608213|gb|EEQ85200.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327349398|gb|EGE78255.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 440

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 159/399 (39%), Gaps = 69/399 (17%)

Query: 102 AWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           AW  L +  IHD  G+    WD  +               +YL     +G    P+   A
Sbjct: 82  AW--LKKLGIHDILGVKVEDWDLLY-------------TGIYLDEMNRSGLSGPPTSLCA 126

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            M      P V K  +P++  R + P      +++ +AI    TE   G+D+A IT+   
Sbjct: 127 GMA--YGVPPVIKFGSPELHER-FLPELLTCKKRSCIAI----TEPDAGSDVANITTTAN 179

Query: 220 KISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           K +DG  Y ++G  KW  ++  +D   M  +  G     L   ++   +  G+  +RL +
Sbjct: 180 KTADGKHYIINGTKKWITNAIWADYTTMAVRTGGPGASGLSLVIVPLKNQPGVTMRRL-S 238

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIM 323
             G  +  T  +E        L D+ V   PVE+        MK ++       L   + 
Sbjct: 239 VTGQAAGGTTFIE--------LDDVKV---PVENLVGEEGLGMKYIMTNFNHERLTIVVG 287

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRLAN- 378
            V   RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ +  A +    +++ N 
Sbjct: 288 VVRQARVALSAAFEYCLKRQAFGKTLMDQPVVRHRLAKAGAELESLWAWTEQFLYQVNNM 347

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           S DE   R     A A+  A +    C ++A  +         G G + ER     YRE 
Sbjct: 348 SKDEGDFRLGGLTALAKAKAGMVLNECAQVAVLLFGGNGLTRTGQGEVAERI----YREV 403

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           P   I  GS +        LL+       ++F   EQ L
Sbjct: 404 PGVRIPGGSEDV-------LLDLSVRQLVKVFKAQEQKL 435


>gi|294650137|ref|ZP_06727518.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823987|gb|EFF82809.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 382

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 31/303 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S  +A  +  + T    + W PK+ S E              A+G +G+TE   G+D+ A
Sbjct: 92  SEIAAPYIQHIGTEEQKQYWLPKMVSGE--------------AVGAIGMTEPGAGSDLQA 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D   +G   
Sbjct: 138 MRTSA-ILQDDHYLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDTHLDGFKK 196

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--G 327
               +KIG  S  T EL F N       LLG  N  +G    M+ L    +AI S +   
Sbjct: 197 GTNLDKIGLHSQDTSELFFDNVKVPKDQLLG--NAGSGFAYLMQELPRERTAIASTALGA 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R ++  A  Y + R   G  +      +  +A   +D  A  A   +    + + K   
Sbjct: 255 IRGAIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVELYMQGKLDV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E AA         K +   M   V    ++  GG GY+ E  I+R + ++    I  G+ 
Sbjct: 315 ETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTN 367

Query: 448 NAM 450
             M
Sbjct: 368 EIM 370


>gi|292655353|ref|YP_003535250.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291371232|gb|ADE03459.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 380

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 25/263 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           G  LTE   G+D + + +  ++  DG Y + G K F+++  ++ + ++ A  +   G   
Sbjct: 122 GWALTEPGSGSDASDMDTVAERDGDG-YVIDGTKQFITNANVAGSVLVKAVTDPGAGYDG 180

Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   + D  + +G       +K+G  S+ T EL F + +     LLG+     G  + MK
Sbjct: 181 ISTFIVDPENDDGFEVTTEWDKMGLNSSPTCELSFDDCWVPEDRLLGEEG--GGWKQTMK 238

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAIADIALDIAAATA- 371
            L   D   +S++ + V LAE  +   + +       D+P+ K  AI D  + +   T  
Sbjct: 239 TL---DGGRISIAALSVGLAEGAYGHAKSYAQEREQFDRPISKFDAIRDKLVSMHRKTER 295

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L+ + A  +D  K  S E+A A++ A        + A  V  +A++ +GG GY  + 
Sbjct: 296 ARLLTHKAATRYDAGKRVSRESALAKLDA-------SEAAREVAEDAVQVLGGYGYTTDF 348

Query: 429 SIARHYRESPANSILLGSGNAMV 451
           +  R YR+  A  + +G G + +
Sbjct: 349 APQRFYRD--AKLMEIGEGTSEI 369


>gi|197120808|ref|YP_002132759.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196170657|gb|ACG71630.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 591

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 41/272 (15%)

Query: 202 LTEKRGGTD------IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-V 253
           LTE   G+D      IA ++  G+      Y L G K F+++   ++ F + A+V+ +  
Sbjct: 146 LTEPEAGSDAMGGKAIATLSPDGKH-----YLLDGTKQFITNGSFANLFTVFAKVDRKHF 200

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             FLV R        G+     + K+G + ++T  + F +       +LG+  +  G   
Sbjct: 201 TAFLVERTF-----PGVTVGPEEKKLGIKGSSTTSVIFESAKVPVENVLGE--IGKGHKI 253

Query: 311 DMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +L      L +A+   +  +++LA    YA  R   G  +     ++  +AD A  +
Sbjct: 254 AFNVLNVGRFKLGAAVTGAA--KLALATGAAYANARKQFGTPIARFGAIREKLADQAAGV 311

Query: 367 AAATALSFRLANSFDE--AKSRSEEAAYAR----------IMAPITKYWCCKMAPAVIAE 414
            A+ +L +RLA   D+  A   +E+  Y            I   I K +C ++   V+ E
Sbjct: 312 YASESLIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYAIECAIAKVFCSEVLADVVDE 371

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++  GG G+I+E    ++YR+   N I  G+
Sbjct: 372 VVQIHGGYGFIQEYPAEKYYRDERINRIFEGT 403


>gi|134103462|ref|YP_001109123.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005996|ref|ZP_06563969.1| butyryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133916085|emb|CAM06198.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 383

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 40/302 (13%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           F  E       P   T  A+G  GLTE  GG+D  A  ++   + DG  + ++G K F++
Sbjct: 102 FGSEEQKRTWLPKLATGEALGAFGLTEPGGGSDAGA--TRTTAVLDGDEWVINGSKAFIT 159

Query: 237 SPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +  +D  +F+ +  V G        +   +VP     G+P G    +  +K+G  ++ T 
Sbjct: 160 NSGTDITSFVTVTAVTGHKPDGGKEISTIIVP----SGTP-GFTVAKKYSKVGWNASDTH 214

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
           EL F +       LLG+           + L  L    ++++ + V LA     E + YA
Sbjct: 215 ELSFDDCRVPAANLLGERGRGY-----AQFLSILTEGRVAIAALGVGLAQGCVDECLRYA 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +   ++  IAD  +++ A TA   RLA  + +A +R       R  A I
Sbjct: 270 GEREAFGHKIGEYQAIQFKIAD--MEMRAHTA---RLA--YYDAAARMLRGEPYRKQAAI 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K      A     +A +  GG G++ E  +AR YR+  A  + +G G + V  +L   E
Sbjct: 323 AKLVSSNAAMDNARDATQIFGGYGFMNETPVARFYRD--AKILEIGEGTSEVQRMLIARE 380

Query: 460 KG 461
            G
Sbjct: 381 LG 382


>gi|260905176|ref|ZP_05913498.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 388

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 27/267 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L  TE   G+D A+IT++ + + DG Y L+G K W  ++ +++ +++ A+ +       V
Sbjct: 128 LATTEPGSGSDSASITTRAEAV-DGGYLLNGQKAWISNAGLAEGYVVFAKTDPAQRSRGV 186

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+PR  E     G+ +     K+G R+    E+ FS+ F      L         + 
Sbjct: 187 TAFLLPRETE-----GMEFGAPMKKMGQRAIVCREIFFSDVFVPTHNRLGEEGRGFYGLM 241

Query: 314 ILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               +   ++  + +  + A    A  YAR R   G  +I+   +   +AD+A  I AA 
Sbjct: 242 RTFDISRVVLGAAALGTARAAYEYARDYARERTQFGKAIIEHQSVAFRLADMAARIDAAW 301

Query: 371 ALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 A   D     E +  +  AA A++ A  T  +C           ++ +GG GY 
Sbjct: 302 LQVLNAARMIDAGDGVEREKVTASAAMAKLGASETAMFCTWA-------GVQTLGGWGYS 354

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            E  + +  R++    I  G+ + M L
Sbjct: 355 REHPVEQWMRDAKLEEIEEGTSDIMRL 381


>gi|302527301|ref|ZP_07279643.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436196|gb|EFL08012.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 395

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 24/246 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           LTE   G++ A + ++  +  D  + L G K F++ +P++D F++ A+          + 
Sbjct: 132 LTEPGAGSNPAGLRTKAVRDGDD-WVLDGQKRFITNAPIADLFVVFARTRPADDSGPGIA 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDM 312
            FLVP         GL       K+G     T ++ F+N    G  L   N   G    M
Sbjct: 191 VFLVP-----ADTPGLEVGPKDKKMGQEGAWTADVTFNNVRVPGSALVGGNEDDGYRAAM 245

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    +  A ++V   + +L E++ YA      G  + D  +++  +AD    + A  
Sbjct: 246 TSLARGRVHIAALAVGSAQRALDESVAYAASATQGGQPIGDFQLVQAMLADQQTGVMAGR 305

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A  +   + R       RI     K +C +MA  V   A++  GG+GY+ +  +
Sbjct: 306 ALVRETAARYVSGEDR-------RIGPSAAKLYCTEMAGKVADLAVQIHGGTGYMRDVPV 358

Query: 431 ARHYRE 436
            R YR+
Sbjct: 359 ERIYRD 364


>gi|218291116|ref|ZP_03495131.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238927|gb|EED06135.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 397

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +       GLTE   G+D+AA+ +   +  D  Y L+G K W   + ++D F++ A 
Sbjct: 113 PQARGEKIGAFGLTEPNAGSDVAAMRTTAVRDGDS-YILNGSKIWISLADVADHFLVFAY 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +       +  F+V R  E     G   + +K K+G R+  T EL F        N  G
Sbjct: 172 TDRSKKHHGITAFIVERGWE-----GFSTRSIKGKLGIRAGNTGELFFDHVRVPVENRLG 226

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +++ +  +   +     + +  S    + Y   R   G  +    +++
Sbjct: 227 EEGEGFKIAMSALDNGRFTVAAGACGCIAACLEAS----VKYCHERETFGQPIGKHQLVQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IA +A ++  +  L +R     ++    + E + A+ +A       C  A    ++A+
Sbjct: 283 QMIAKMAANLDISRLLVYRAGWLKNQGLPNTRETSLAKWVA-------CDAAWEAASDAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  G  GY  E  + R+ R + A  I  G+
Sbjct: 336 QIHGAYGYSNEYPVERYLRNAKAPVIYEGT 365


>gi|94967495|ref|YP_589543.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549545|gb|ABF39469.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 560

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 44/303 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           TP   K W  +I +               +    G TE   G+D+ A+ +   ++ D   
Sbjct: 104 TPEQKKHWLGRIGNE-------------GILFAYGATEPDAGSDLGALRTTADRVMDAER 150

Query: 226 ---YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y + G K W  +  ++DA+ +LA        F+V    E G+P G  + + +NK G 
Sbjct: 151 VVGYRIDGLKQWISNGGIADAYTILANTPAGPSWFVV----EKGAP-GFTHDKPENKHGI 205

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
           R++ T  L   N +     L+G +    G ++   +  Y  L  A   +     +L  AI
Sbjct: 206 RTSNTAALALQNVYVNADRLIGGVE-GQGLLQAQAVFGYTRLMVAAFGLGSGWAALDRAI 264

Query: 337 HYARRRHVSGGILID-QPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYAR 394
            Y+ +R   G  L + Q    + I   A  + A+ A     A   D+ + S + E A A+
Sbjct: 265 PYSTKRIQGGAPLSEKQGYTHKLIVPNAARLEASRAFIEETAERIDKGEGSLNTEGAIAK 324

Query: 395 IMAPI---TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            MA     T   CC          ++ +GG GY  E  I +  R+    +I  G+   M 
Sbjct: 325 YMATEAGNTTAECC----------IQALGGYGYTHEYMIEKIKRDVRITTIYEGTSEIME 374

Query: 452 LDV 454
           + +
Sbjct: 375 MTI 377


>gi|330971272|gb|EGH71338.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 332

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 19  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEHVGALAMSEP 78

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 79  NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 137

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 138 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 188

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 189 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 248

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E    R
Sbjct: 249 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 301

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 302 LLRDAKLYEIGAGT 315


>gi|258650576|ref|YP_003199732.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258553801|gb|ACV76743.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 381

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 34/338 (10%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
             I D  +  ++ +QAH++  A   L   L+A   +   VT         TP     W P
Sbjct: 63  AGISDFRYNMILMEQAHRLGVAPAVLGPALQADICLPYFVTG--------TPEQRARWLP 114

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I          A    T+VA    +TE   G+D++ I ++  +  D  Y L G K F++
Sbjct: 115 GIV---------AGTSITAVA----MTEPGTGSDLSGIATKAVRDGDH-YVLDGSKTFIT 160

Query: 237 SPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           + + +D  I+  +  G     L   ++E G+P G    R   K+G  +  T EL F+   
Sbjct: 161 NGINADLVIVAVRTGGHAHRGLSLIVVERGTP-GFERGRKLAKVGLHAQDTAELSFAGAR 219

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LLG        +        L  A+ +V+    +L   I + R R   G  +   
Sbjct: 220 VPAANLLGGEGSGFTQLTANLTQERLSVAVGAVAAAATALDRTIDHVRTRTAFGAPIGAL 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IA++A +I  A     R     ++      +AA A       K+W  +M   V+
Sbjct: 280 QHIRFQIAELATEIDIAQQYVDRCVTEHNQGVLGPVDAAKA-------KWWTTEMQWRVL 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              ++  GG GY+ E  IAR + ++    I  G+   M
Sbjct: 333 DACVQLHGGMGYMTEHPIARAWADARVQRIYAGTTEIM 370


>gi|170725395|ref|YP_001759421.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169810742|gb|ACA85326.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 391

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 29/254 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D   + ++ ++I DG Y L+G K W  +SP++D FI+ A
Sbjct: 125 PKLATGEWVGCFGLTEPDVGSDPGGMKTRAERI-DGGYRLNGAKMWITNSPIADVFIVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           ++EG++  F++ + ++     GL   +++ K   R++ T E+   N       L+ +   
Sbjct: 184 KLEGKIRGFILEKGMK-----GLSAPKIEGKFSLRASVTGEIVMDNVEVPESALMPNAEG 238

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAI 359
             GP         L+ A   ++   +  AE   +  R++    +  ++P     ++++ +
Sbjct: 239 LQGP------FGCLNKARYGIAWGALGAAEFCWHGARQYTLDRVQFNRPLAANQLIQKKL 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        +     D      +EA     ++ I +  C K A  +   + +  
Sbjct: 293 ADMQTEITTGLFACLQAGRLMD------QEALPVEAISLIKRNSCGK-ALDIARMSRDMH 345

Query: 420 GGSGYIEERSIARH 433
           GG+G  +E  I RH
Sbjct: 346 GGNGISDEFHIIRH 359


>gi|94499472|ref|ZP_01306009.1| fadE13 [Oceanobacter sp. RED65]
 gi|94428226|gb|EAT13199.1| fadE13 [Oceanobacter sp. RED65]
          Length = 383

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 27/266 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DG--IYCLSGHKWFLSSPMSDAFIMLA---QVEGRV 253
           L +TE  GG+D+A I ++ +K+  DG   Y ++G K F++S     F  +A     +G  
Sbjct: 124 LAITEPSGGSDVANIKTRAEKVEVDGKAFYKVNGSKTFITSGERADFYTVAVRTGGDGYG 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
           G  L+  L+E G+P G    R   K+   ++ T EL F +       L+G  N  TG   
Sbjct: 184 GVSLI--LIEKGTP-GFSVGRNLKKMCWWASDTAELFFEDCLVPAENLIGAEN--TGFFA 238

Query: 311 DMKILIYLDSAIMSVSGMRVSLA--EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M         + S++ M   LA  + + Y++ R   G  +    V K  + ++A  +  
Sbjct: 239 IMTNFQSERLMLTSMANMTAELALDQVMQYSKEREAFGRPIGKYQVTKHKLVEMATKLEV 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  + +++A        + +E + A+  A  T  +       +  +A++ +GG G + E 
Sbjct: 299 SKTMMYQVAAQMHRGVDQVKEVSMAKNFATDTSDY-------ITHQAVQIMGGMGLMREC 351

Query: 429 SIARHYRESPANSIL-LGSGNAMVLD 453
            + R YR+   N IL +G G   +++
Sbjct: 352 VVERLYRD---NRILSIGGGTREIMN 374


>gi|255654848|ref|ZP_05400257.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-23m63]
 gi|296449591|ref|ZP_06891368.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296878086|ref|ZP_06902101.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|296261655|gb|EFH08473.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296430839|gb|EFH16671.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 380

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 33/294 (11%)

Query: 170 VHKDWAPKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-GI 225
           +H  +A  I  F  E       PM      +G   LTE   G+D A   +      +   
Sbjct: 89  IHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTAIIDEETDE 148

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+S    +++ I+ A  +   G   +  ++ D    G    +++ K+G   +
Sbjct: 149 YVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGS 208

Query: 285 ATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334
            T EL F       SN  G      N++         +  LD A + V    V +AE   
Sbjct: 209 ETAELIFDNCRVPKSNLLGKEGKGFNIA---------MTCLDGARIGVGAQAVGIAEGAL 259

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+     +  ++EAA 
Sbjct: 260 EESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A       KY     A  V   A++  GG GY+++  + R YR++    I  G+
Sbjct: 320 A-------KYNASHTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITEIYEGT 366


>gi|254487928|ref|ZP_05101133.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101]
 gi|214044797|gb|EEB85435.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101]
          Length = 383

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 47/310 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S+ +L+ TP ++   + ++ +R        P   +  AIG + +TE   G+D+AAI ++ 
Sbjct: 91  SLHSLIVTPYINNRGSDELKARIL------PRMVSGDAIGAVAMTEPGTGSDLAAIKTRA 144

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCY 272
           ++  +G + ++G K F+++  +   ++ A V    +G  G   F++ R +      G   
Sbjct: 145 ERHGNG-WKINGQKTFITNGQNADVVVTACVTDPSKGAKGVSLFVIEREMA-----GFSR 198

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS----TGPVEDMKILIYLDSAIMSV 325
            R   KIG   N T EL F + F     LLG+ N         +   ++LI +     + 
Sbjct: 199 GRNLRKIGQHGNDTAELFFEDVFVPGENLLGEENKGFYYLMEELAQERLLISVQCQARAE 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSF 380
           +   ++    + Y   R   G  ++D    +  +A +  ++ A  A     ++ RLA   
Sbjct: 259 AAFEMT----VDYVNERKAFGKKILDFQNTRFVLAGLKAELMAGRAFCDALIALRLAGKL 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D             + A   K +  ++   V+ + ++  GG GY+EE  IA+ + ++   
Sbjct: 315 DA------------VQASAGKLYHSELLGRVVDQCLQLFGGYGYMEEYPIAQAFVDARIE 362

Query: 441 SILLGSGNAM 450
            I  G+   M
Sbjct: 363 RIYAGTSEIM 372


>gi|158319223|ref|YP_001511730.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139422|gb|ABW17734.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 378

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254
             LTE   G+D  A  ++   I DG  Y L+G K F+S+   +   ++ A  +   G   
Sbjct: 122 FALTEPNAGSDAGA--AKTTAILDGDEYVLNGTKCFISNGGQAQHLLIFALTDPSKGLKG 179

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             C LV    E G+P G    ++++K+G   + TVEL F N     +   N+     +  
Sbjct: 180 LSCILV----EKGTP-GFTIGKIEDKMGINGSETVELIFDNC---RVPKENLIGKEGKGF 231

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I +  LDSA + V    + +AE+     + Y + R   G  L     +   I+D+A   
Sbjct: 232 MIAMNALDSARIGVGAQALGIAESALEESVKYMKERVQFGKPLTALQGLTWYISDMATKT 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+     ++ ++EAA A++ A  T       A  V   A++  GG GY++
Sbjct: 292 EAAKWLVYHAAHLKATGENHTKEAAMAKLNAAET-------ARHVTNLALQIHGGYGYMK 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R YR++    I  G+
Sbjct: 345 DYPLERMYRDAKITEIYEGT 364


>gi|82617161|emb|CAI64068.1| acyl-CoA dehydrogenase [uncultured archaeon]
 gi|268323006|emb|CBH36594.1| probable acyl-CoA dehydrogenase [uncultured archaeon]
          Length = 428

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 123/255 (48%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257
             LTE   G+D  A+ +      D  Y L+G K +++ + ++D +I+ A  + G+    +
Sbjct: 172 FALTEPSAGSDPTAMGTNAVHEGDE-YLLNGRKAYITNTSVADIYIVFAYTDKGKKRAGM 230

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
              ++E G+  G  +  + + +G RS     L+F++     + + N+     +  KI + 
Sbjct: 231 SAFIVEKGT-KGFSFAGINDMLGMRSCIVGGLKFNDC---RVPEENLLGSEGDGFKIAMG 286

Query: 317 YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +++S + V + +A       YA+ R  S   + +   ++  +AD+A+++ AA  
Sbjct: 287 TLDRDRIAMSSVGVGITQACLDISKKYAKERRQSSQPIANFQAVQFMLADMAVEVEAARL 346

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+++ A+  D+ +  ++        A I K +  ++A      A++  GG G  +E    
Sbjct: 347 LTYKAAHLADKGEKITK-------YASIAKLYASEVAQRAATNAVQIHGGYGCTKECPAE 399

Query: 432 RHYRESPANSILLGS 446
           R+YR++   SI +G+
Sbjct: 400 RYYRDAKILSIAVGT 414


>gi|78047085|ref|YP_363260.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78035515|emb|CAJ23161.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 391

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKLWITNGSIAGLAIIWAHTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                     G     + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 196 KT-----DSAGFSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPRAAGLKAPLSCLNQA 250

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ YA  R + G  L      +  +AD+A  IA A  L+ +L
Sbjct: 251 RYGIAWGAIGAAMACLREALAYAGERILFGRPLAATQSAQIKLADMARRIATAQLLALQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               D    + E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 311 GRLKDAGTLQPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|84495430|ref|ZP_00994549.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384923|gb|EAQ00803.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 625

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 65/341 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + ++G K F++S  SD        +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGRTKATQNEDGTWDITGVKRFITSAESDMVDNVVHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
             +  F++ +   D      G  NG+    ++ K+G + + T EL F       G LLGD
Sbjct: 224 KGLSLFILTKYAVDLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGGEKAATGTLLGD 283

Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---- 353
           ++         +E+ ++L+       +++ +      A+ YA+ R V G  L  Q     
Sbjct: 284 VHDGIAQMFRVIENARMLV----GTKAIATLSTGYLNALEYAKER-VQGADLTQQTDKAA 338

Query: 354 ---------------VMKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEA 390
                          ++++A A+    +   TA    + +S          E  S +E+A
Sbjct: 339 PRVTITHHPDVRRSLMLQKAYAEGLRALVLYTAAQQDIVDSAQLESGAETLEHGSPAEQA 398

Query: 391 AYAR-IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                ++ PI K    + A  ++  E+++  GGSG++++  + ++ R++  +++  G+  
Sbjct: 399 NRVNDLLLPIVKGLGSERAWVLLGTESLQTFGGSGFLQDYPVEQYVRDAKIDTLYEGTTA 458

Query: 449 AMVLD------VLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
              LD      + +  +  T L  Q+     +DLG  G K+
Sbjct: 459 IQGLDFFFRKIIKDKAQALTTLAMQI-QEFAKDLGGHGGKL 498


>gi|103488487|ref|YP_618048.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978564|gb|ABF54715.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 387

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 41/278 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237
           F  E    +  P   +      GLTE   G+D AA+ ++     +G Y L+G K +++ +
Sbjct: 103 FGTEQQKAHWLPKLASGSIAAFGLTEPDSGSDSAAMKTRAVPSGNG-YVLNGTKRYITNA 161

Query: 238 PMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           P +D  +++A+           V  FLVPR        G+   +   K+G   +   ++ 
Sbjct: 162 PFADVILVMARTNAEALPKNAHVSAFLVPR-----DAPGVSIGKPDGKMGQAGSQIADV- 215

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA------------IHY 338
                  +L D++V    +   +  I   +A+ S+   R+S+A A            + Y
Sbjct: 216 -------ILEDVHVDGDALLGGEEGIGFRAAMQSLDNGRLSVAAASVGYAKRMLDTGLRY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +    +++  +AD   +I AA  +        ++A +R++      + A 
Sbjct: 269 AMERKAFGEPIASFQLIQAMLADSKAEIYAADCM-------LNDACARADRGEKILVEAA 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            TK +  +M   V    ++  GG+GY++E    R YR+
Sbjct: 322 ATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRD 359


>gi|328545114|ref|YP_004305223.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414856|gb|ADZ71919.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 384

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 31/264 (11%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA-----QVE 250
           A G  LTE   G+D A + ++  +  D  Y L+G K +++S   +  F++ A       +
Sbjct: 122 AGGFCLTETGAGSDPAGMKTRAVRDGD-HYVLNGAKLYITSAEYAGIFVVWAVTDPDAAK 180

Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN--- 303
           G+ + CFLV    E G+P GL   + + K+G   +AT E+ F +       L+G  N   
Sbjct: 181 GKGISCFLV----ETGTP-GLVIGKAETKMGQTGSATNEVLFQDCRVPATALMGPENAGF 235

Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            V+ G +   +I I    A +S+   R ++  A  YA+ R   G  L D   ++  IAD 
Sbjct: 236 KVAVGELAGGRIGI----AALSLGIARAAMEAAKAYAKERRQFGTALADMQGLQWMIADR 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ AA  L  + A   D+ +S ++EA+ A++       +  + A      A++  GG+
Sbjct: 292 ETELEAARLLVLQAAWLKDQGRSFAKEASMAKL-------YASEAAQRATYTALQIHGGA 344

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI +  + R  R++   +I  G+
Sbjct: 345 GYIRDYPLERFARDARITTIYEGT 368


>gi|156741868|ref|YP_001431997.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233196|gb|ABU57979.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 364

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 34/301 (11%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +LM+P++ +  ++   T  +  K W P++    + P   A            L E R   
Sbjct: 89  YLMTPNLFAIPILHYGTEEQKEK-WLPRLVEGGFAPYTAA------------LIEPRWSF 135

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A+ +  ++    +Y ++GHK  +  +  + AF++ A+       F++ R  E     
Sbjct: 136 DPHALHTVAER-EGHVYEITGHKALVPLAADAHAFLVYAREGETTQAFIIERGTE----- 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           GL     ++ +G R+  T EL   +        + GD  +    ++ +     +  A ++
Sbjct: 190 GLAVLERESFMGIRALPTYELRLDDVHVPASCRVGGDQGID---IDHLMNYSRVALAALA 246

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA++R   G  +     +   +A++A+++ AA  +++  A   D+ +
Sbjct: 247 VGVARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEVEAARLMTYEAAWHLDKGR 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA A       K +  +MA  V   A++ +GG GYI E  + R  R     S  L
Sbjct: 307 HAVQQAALA-------KAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFL 359

Query: 445 G 445
           G
Sbjct: 360 G 360


>gi|307946508|ref|ZP_07661843.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307770172|gb|EFO29398.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 386

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249
           L +TE   G+D+  +  Q  +   G + +SG K F+S +  +D FI+             
Sbjct: 122 LAITEPDAGSDVRGMKCQAVR-DGGDWVISGSKHFISGAEHADFFIVFIATGVDETPRGP 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           + R+ CFLV R    G+P G   +   N + ++      L F         +LG+++   
Sbjct: 181 KKRITCFLVDR----GTP-GFEVRDGYNSVSHKGYKNYILYFDKCRLPDAQVLGEVD--- 232

Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + M   +Y   L  A MSV   R     A++YA  R   G  +     +   IAD+ 
Sbjct: 233 GGFQVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGEAIARFQGVSFQIADMI 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L+   A   D+    + E A A++ A        +M   V    ++  GG G
Sbjct: 293 TEIDAADWLTLAGAWRLDQGLPANREIASAKLYA-------TEMLANVTDTTLQIFGGMG 345

Query: 424 YIEERSIARHYRESPANSILLGS 446
            +++  I R +R++    I  G+
Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368


>gi|302499832|ref|XP_003011911.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371]
 gi|291175465|gb|EFE31271.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371]
          Length = 372

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 19/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 113 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 171

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+
Sbjct: 172 FVVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDV---EVPKENLLGEEGQGYKYAISLLN 228

Query: 320 SAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              + ++     LA       A +    R   G ++     M+  +A    +IAAA AL 
Sbjct: 229 EGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALV 288

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E    + 
Sbjct: 289 FNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIAEKM 341

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R+S   +I  G+ N  +  +   L+K
Sbjct: 342 FRDSKIGAIYEGTSNIQLQTIAKSLQK 368


>gi|254700278|ref|ZP_05162106.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261750771|ref|ZP_05994480.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261740524|gb|EEY28450.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
          Length = 380

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKHIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|331014342|gb|EGH94398.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 387

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGALDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|296168927|ref|ZP_06850596.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896396|gb|EFG76049.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 389

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E+  G+D A++ ++ +  +DG  + L+G K W  +   S  + ++A  +   G   + 
Sbjct: 134 LSEREAGSDAASMRTRAK--ADGEDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGIS 191

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             +      G      + K+G + + T EL F N    + GD  +          L  LD
Sbjct: 192 SFMVHKDDEGFTVGPKEKKLGIKGSPTTELYFENCR--IPGDRIIGEPGTGFKTALATLD 249

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + +
Sbjct: 250 HTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGRPVSDNQGVQFMLADMAMKLESARLMVY 309

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A     A++   E     I A  +K W   +A  V  +A++  GG GY ++  + R  
Sbjct: 310 HAA-----ARAERGETNLGFISA-ASKCWASDVAMEVTTDAVQLFGGYGYTQDFPVERMM 363

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 364 RDAKITQIYEGT 375


>gi|255078674|ref|XP_002502917.1| predicted protein [Micromonas sp. RCC299]
 gi|226518183|gb|ACO64175.1| predicted protein [Micromonas sp. RCC299]
          Length = 434

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 29/276 (10%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE 250
           +    I L +TE   G+D+A I    +K + G  Y + G K W  +   +D F +  +  
Sbjct: 153 RGEATICLCITEPYAGSDVANIRCTAKKSNCGNFYVVDGEKKWITNGVWADYFTVAVRTG 212

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
           G     +   L+E   P   C  R  + +G  ++ T  + F N     G L+G  N    
Sbjct: 213 GSGMGGISLLLIEKTMPGVQC--RRMDCMGVWASGTSFITFENVKVPVGNLIGAEN---- 266

Query: 308 PVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                K +++          + +    RV   EA  YA RR   G  L++ PV++  +AD
Sbjct: 267 --NGFKYIMHNFNHERWGFVVQANRFARVCYEEAFKYAHRRRTFGKRLVEHPVIRAKLAD 324

Query: 362 IALDIAAA----TALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +   I A       +++++     E  AK+ +   A A++ +     +C + A  +   A
Sbjct: 325 MVRQIDATHHQMENITYQMCTMPKEQSAKALAGITALAKVQSTKVFEYCAREAAQIFGGA 384

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               GG G      + R YR+  A +I  GS   M+
Sbjct: 385 SYVRGGQG----EKVERLYRDVRAYAIPGGSEEIMM 416


>gi|153007382|ref|YP_001368597.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559270|gb|ABS12768.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 387

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 135/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 108 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 153 YVLNGNKMWITNGPDADVLVVYAKTDPSAGPRGISAFIVEKGFKGFSTAQKLDKLGMRGS 212

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G +   +NV    ++  ++++    A   +  M   L   + 
Sbjct: 213 NTCELVFEDCEVPAENLLGEVGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 268

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A ++ +A + D  ++  ++AA 
Sbjct: 269 YVHERK-----QFDQPIGEFQLMQGKLADMYVTFNASRAYTYAVAAACDRGETSRKDAAG 323

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 324 CIL-------YTAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 374

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 375 RML----IGRELFQE 385


>gi|149914858|ref|ZP_01903387.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b]
 gi|149811046|gb|EDM70883.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b]
          Length = 407

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K + G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTATG-YRLTGSKMWISNAPIADVFVVWAKSEAHDGKIKG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++     D    GL   ++  K   R++ T E+      G  +G+ +     VE +K  
Sbjct: 208 FIL-----DKGAKGLSAPKITGKQSLRASVTGEIVMD---GVEVGE-DALLPNVEGLKGP 258

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   ++   +  AE     A  Y   RH     L    + ++ +AD+  ++   
Sbjct: 259 FGCLNRARYGIAWGVMGSAEFCWHAARQYGLDRHQFRRPLAQTQLFQKKLADMQTEVTLG 318

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R+    DEA +  E       M  + K   C  A  +   A +  GG+G  EE  
Sbjct: 319 LQAALRVGRLMDEASAAPE-------MISLIKRNNCGKALDIARMARDMHGGNGISEEYQ 371

Query: 430 IARH 433
           + RH
Sbjct: 372 VIRH 375


>gi|293602002|ref|ZP_06684458.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292819625|gb|EFF78650.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 388

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 40/256 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252
             LTE + G+D  A+ +   +  D  Y L+G K F++ +P++  F ++A+ +        
Sbjct: 122 FALTEPQAGSDATALRTTAVRDGDS-YVLNGEKCFITNAPLAGLFTVMARTDPDAPGAKG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+V R        GL   +  +K+G   +    + F N          V    V   
Sbjct: 181 ISAFIVER-----DTPGLSTGQPYDKMGQAGSPVSAVYFDNC--------RVPAANVIGG 227

Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360
           +  +   +A+  ++  R+ LA            + + +   R   G  L++  +++  +A
Sbjct: 228 QEGMGFKTAMKVLNKQRIHLAALCIGPAIRMLDDTLRFVAERQQFGKPLMEFQLIQAMLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   DI AA AL  + A   D  +  +       + A I KY+  +M   V    ++  G
Sbjct: 288 DCQTDIQAALALVLQTARERDAGQDVT-------MNASICKYFASEMCGRVADRCVQMHG 340

Query: 421 GSGYIEERSIARHYRE 436
           G GYI ++ I R YR+
Sbjct: 341 GYGYIADQGIERFYRD 356


>gi|148252258|ref|YP_001236843.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404431|gb|ABQ32937.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 389

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 22/272 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP       + LG++E   G+D+A+I +  +   D      G  W  +   +D   +LA 
Sbjct: 112 APAVSGDAVVCLGVSETGAGSDVASIKTTARSDGDDYVINGGKMWTTNGTQADWMCLLAN 171

Query: 249 V-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             +G V       +VP         G+   R  +K+G  S+ T ++ F N        + 
Sbjct: 172 TGDGPVHRNKSLIIVPM-----KTKGVQIARKLDKLGMHSSDTAQIFFDNVRVPKRNRVG 226

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS----LAEAIHYARRRHVSGGILIDQPVMKRAI 359
              G     ++L + +  +   +    S    +A+ I Y R R V G  ++D  V+   +
Sbjct: 227 -EEGQGFTYQMLQFQEERLWGAAACLKSHEYIIAKTIEYTRERKVFGRSVLDNQVVHFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++    AL +R A +    +  +  A  A++ A        ++   +    ++  
Sbjct: 286 AEMQTEVELLRALIYRAAEALIAGEDVTRLATMAKLKAG-------RLGRELTDACLQYW 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG G++ E  ++R YR++   SI  G+   M+
Sbjct: 339 GGMGFMNETPVSRAYRDARLTSIGGGADEVML 370


>gi|332843535|ref|XP_001143270.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 7
           [Pan troglodytes]
          Length = 396

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 120 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 164

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 165 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 221

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +       +LG  N     +     L  L  A   +  M+  L   I Y   
Sbjct: 222 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   +      
Sbjct: 282 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 335

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  V  + ++C GG+GYI +  + R  R++    I  G+
Sbjct: 336 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 379


>gi|330820634|ref|YP_004349496.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327372629|gb|AEA63984.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 393

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 17/256 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K   G Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADK-RGGHYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310
              + +    G    +  +K+G R + T EL F        N  G + G + V  +G   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENVLGEVGGGVKVLMSGLDY 247

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L    + IM+       L   + Y   R   G  + +  +++  +AD+  +  A  
Sbjct: 248 ERAVLAGGPTGIMAAC-----LDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTNFQACR 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +    D A S             I   +  + A  +  EA++ +GG+GYI E  +
Sbjct: 303 AYLYAVGRHLDAAGSGHVRQVRKDCAGVI--LYTAERATWMAGEAIQILGGNGYINEYPV 360

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 361 GRLWRDAKLYEIGAGT 376


>gi|288555393|ref|YP_003427328.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus pseudofirmus
           OF4]
 gi|288546553|gb|ADC50436.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus pseudofirmus
           OF4]
          Length = 381

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 22/249 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
           I    TE   G+       Q   + DG  + +SG K F + +P+ D FI+ A +E   G 
Sbjct: 120 INAAATEPDTGSPTRGGKPQTTAVKDGTEWVISGKKTFTTMAPVLDYFIVTASLEDEEGV 179

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL-NVSTGPV 309
             FL+PR     SP G+      N +G R+  + +L   N      FL+  L N    P 
Sbjct: 180 ANFLIPR----ESP-GIIIDETWNTVGMRATGSHDLLLKNVRVPNRFLVERLSNKEKTP- 233

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIA 367
             M  L+++ +  + ++    +  E+I++A+    +   G + + P +++ I +    + 
Sbjct: 234 --MGWLLHIPACYLGIA--EAAQRESINFAKTYSPNSISGTISELPNVQQRIGENEAKLM 289

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +    + +A  +D   S  EE ++ +      K      A  V+ +AM   G SG   +
Sbjct: 290 QSRHFLYSVAKKWD--SSSQEERSFMKPELAAVKMMVVNSANDVVDQAMRVAGASGLFHD 347

Query: 428 RSIARHYRE 436
             + R+YR+
Sbjct: 348 NPLQRYYRD 356


>gi|91976676|ref|YP_569335.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683132|gb|ABE39434.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 384

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP + K +      RE+     AP     +   +G++E   G+D+AAI +  +   D 
Sbjct: 93  MATPALAK-FGSDALRREF----LAPAIAGDMVACIGVSEPGAGSDVAAIKTTARSDGDD 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNKI 279
                G  W  +   +D   +L    +G +        VP      +  G+   R  +K+
Sbjct: 148 YVITGGKMWITNGTQADWICLLCNTGDGPIHRNKSLICVPM-----NSKGVTIARKLDKM 202

Query: 280 GNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G  S+ T ++ F        N  G     L  +   V+  +  ++  +A +       ++
Sbjct: 203 GMHSSDTAQIHFDEVRVPKRNRIGEE--GLGFTYQMVQFQEERLWGAAACLKAH--EGTI 258

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E I Y R R   G  L+D  V+   +A++  ++    AL +R A +    +  ++ A  
Sbjct: 259 QETIEYTRNRKAFGKPLLDNQVIHFRLAELQTEVELLRALVYRAAEALVAGQDVTQLATM 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A++ A        ++   +    ++  GG G++ E  ++R YR+S   SI  G+   M+
Sbjct: 319 AKLRAG-------RLGRELPDACLQFWGGMGFMNETLVSRSYRDSRLTSIGGGADEVML 370


>gi|134292212|ref|YP_001115948.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
 gi|134135369|gb|ABO56483.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
          Length = 393

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKHGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVDAGSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S             I   +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGSDHLRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|218295460|ref|ZP_03496273.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244092|gb|EED10618.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 577

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 40/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D  A  ++     DG  Y L+G K W  ++  +  F + A+V+G     FLV
Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAQLFTVFAKVDGEHFTAFLV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        GL +   + K+G ++++T ++        +L D+ V   PVE++   I  
Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251

Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              I               +V G + +L  +  YA +R   G  +    +++  + ++A 
Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAAQRVQFGRPIGRFGLIQEKLGEMAS 311

Query: 365 DIAAATALSFRLANSFDEAKSRSE--EAAYARIM-----APITKYWCCKMAPAVIAEAME 417
            I AA +  +R     DEA    E  EA  A I      A I K    ++   V+ E ++
Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKEGAEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY +E  I R YR++  N I  G+
Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400


>gi|167615724|ref|ZP_02384359.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
          Length = 393

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +     + L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-RFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S      +AR        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--AHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|206564273|ref|YP_002235036.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198040313|emb|CAR56298.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 393

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S        R  A +  Y   K A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGSDHIRQV-RRDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|149183811|ref|ZP_01862210.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1]
 gi|148848478|gb|EDL62729.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1]
          Length = 594

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 150/368 (40%), Gaps = 67/368 (18%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IA 212
           S+T  + V + + P V       +F  E       P   T   I    LTE   G+D + 
Sbjct: 109 SITHGAHVGIGSLPIV-------LFGDEDQKQKYLPALATGEKIAAYALTEPGSGSDALG 161

Query: 213 AITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
           A T+     +   Y L+G K W  ++  +D F++ A+++G +   F+V R        G+
Sbjct: 162 ARTTAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGEQFSAFIVER-----EYPGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------KILIY------ 317
                + K+G +S++T  L        +L D  V   PVE++        I+ +      
Sbjct: 217 STGAEEKKMGIKSSSTRTL--------ILEDAQV---PVENLLGEAGKGHIIAFNILNIG 265

Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                + +V G + ++   I YA +R      +    + K   A +A  + A  +  +R 
Sbjct: 266 RYKLGVGAVGGSKRAMDVTIKYANQRQQFKTPISSFNLTKEKFATMAAKLYATESSVYRT 325

Query: 377 ANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              F++  S+ +EE            A YA I   + K +  +    ++ E ++  GG G
Sbjct: 326 VGLFEDRMSKLTEEEVKNGTEVAKSIAEYA-IECSLNKVFATETLDYIVDEGVQIHGGYG 384

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFST 471
           +++E  I R YR+S  N I  G+     L V            L L +K   L E+L   
Sbjct: 385 FMQEYEIERMYRDSRINRIFEGTNEINRLLVPGTFVRKALKGELPLFQKAQALQEELMML 444

Query: 472 LEQDLGSS 479
           + +++G +
Sbjct: 445 MPEEVGDA 452


>gi|148554758|ref|YP_001262340.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499948|gb|ABQ68202.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 387

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 34/276 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------RV 253
           G++E   G D+A++ + G+   D +  ++G K F S     ++I      G        +
Sbjct: 126 GISEPDVGADVASVRTTGRVEGDRL-IVNGSKRFCSGATIASYIYTLVRTGPREDRHRNL 184

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
              L+P        +G+ ++  ++ +G +   T ++ F+       N  G   G  N  T
Sbjct: 185 TLVLIP-----SDADGITFE-AQDALGLKGTGTYDVTFADVSVPLANVVGEEAGFNNAWT 238

Query: 307 ---GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP  D++    ++ A M++     ++ EA  YA+ R   G  +     ++  +A+  
Sbjct: 239 MLVGPGLDIE---KMEVAAMALGIASAAVEEAWAYAQERVQFGKPISAFQSVRHMLAEAR 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  A++++ A++ D A+  S E + A       K + C+ A  ++    + +G  G
Sbjct: 296 TKLHACRAVTYQAADALDRAEDASLETSMA-------KLFVCQTAQEIVLACQQVLGAYG 348

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           YI+E  + RH R+     IL GS      ++ N+L+
Sbjct: 349 YIKEFDMERHVRDILVMPILGGSSAIQKNNICNMLK 384


>gi|88802197|ref|ZP_01117724.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781055|gb|EAR12233.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 380

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y L+G K W  S   +D ++++AQ +   G   +  
Sbjct: 125 LSEPEAGSDATSQATTAEDKGDH-YLLNGTKNWITSGGRADVYLVMAQTDREKGHKGINA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + +    G      ++K+G R + T  L+F++             FGF      +S G 
Sbjct: 184 FIVEKGAEGFHVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGADGFGFTFAMKTLSGG- 242

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               +I I   +  ++  G  +    A+ Y++ R   G  + +   +   +AD+  +I A
Sbjct: 243 ----RIGIAAQALGIAAGGYEL----ALKYSKERKAFGTEICNHQAIAFKLADMYTEIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A   D   +    +A A++       +  K+A     EA++  GG+G++++ 
Sbjct: 295 ARMLVMKAAWDKDNGHNYDMSSAMAKL-------YASKVAMEQTIEAVQIHGGNGFVKDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|254707856|ref|ZP_05169684.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|261315345|ref|ZP_05954542.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261304371|gb|EEY07868.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
          Length = 571

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|225629546|ref|ZP_03787579.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|225616042|gb|EEH13091.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
          Length = 381

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 184 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 238 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351

Query: 432 RHYRE 436
             YR+
Sbjct: 352 HFYRD 356


>gi|115733016|ref|XP_782503.2| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain
           [Strongylocentrotus purpuratus]
 gi|115950405|ref|XP_001189622.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain
           [Strongylocentrotus purpuratus]
          Length = 443

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 39/280 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       +G L +TE   G+D+  I +  +K  D  Y L+G K F+++  +SD  +++A
Sbjct: 172 PAMTAGTKVGALAMTEPAAGSDLQGIKTSAKKDGDD-YILNGSKVFITNGCLSDVVVVVA 230

Query: 248 QVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297
             +         +  FLV    E G P G    +   K+G +S  T EL F +       
Sbjct: 231 ITDLNAKKKAHGISLFLV----EAGMP-GFTKGKPLEKVGQKSVDTCELFFEDVRLPASA 285

Query: 298 LLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           LLG  N      ++  P E + I       +   +       E  +Y R+R   G  L +
Sbjct: 286 LLGKENQGFYMLMNQLPRERLII------GVGCQAHTEFMFEETRNYVRQRKAFGKTLGN 339

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPA 410
              ++  +A++   I         +  SF +   R E E       A ++KYW   +   
Sbjct: 340 IQTIQHKLAELKTLIC--------IGRSFQDDCLRLESEGKLDTYTASMSKYWGSDVINK 391

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V  E ++  GG GY+ E  IAR + ++   +I  GS   M
Sbjct: 392 VATECLQLHGGWGYMWEYPIARAFCDARVGAIYGGSNEIM 431


>gi|299531019|ref|ZP_07044432.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298720976|gb|EFI61920.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 406

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P+ +   AI   LTE + G+D  A+  Q + + +G  Y L+G K F+S SP +D  +++A
Sbjct: 139 PVARAEKAICFALTESQAGSDAGAV--QTRAVCEGEHYVLTGRKRFISGSPFADFAVLMA 196

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL------------EFSN 293
               EG V   +    ++  +P        K   G      + L            E   
Sbjct: 197 STAPEGSVEREISAFFVDLAAPGVEVVSGYKTMAGQSHTGDIHLNSVRVPVAQLIGEPGR 256

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G  LG + V+         L++   A++ ++  + +L +A  YA  R   G  +    
Sbjct: 257 GLGLALGRITVNR--------LLHC-PAMLGLA--QCALRDARDYALSRQQFGRSIAQFQ 305

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A D  AA AL    A + D           AR  A ++K +C + A A+  
Sbjct: 306 SIQHMLADMATDWMAARALMIHTARALDAGID-------ARAQASMSKLFCSEKAFAIAD 358

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A++  GG G ++ R +   +R      +L G+
Sbjct: 359 RAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTGT 391


>gi|154295184|ref|XP_001548029.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10]
 gi|150844218|gb|EDN19411.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10]
          Length = 554

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G+ G  
Sbjct: 278 ICLAITEPDAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGKDGMN 337

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            V  LL + S  G+  +++  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 338 GVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 390

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  +   RV   E + YA +R   G  LID PV++  +A +A  I 
Sbjct: 391 VIMTNFNHERIGIIIQCLRFSRVCYEECVKYAHKRRTFGKKLIDHPVIRLKLAHMARQIE 450

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+ +    L +   +     E  A  R+  PI         T  +C + A  +       
Sbjct: 451 ASYSW---LESLIYQCSKMGETEAMLRLGGPIAGLKAQATVTFEFCAREASQIFGGLSYS 507

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 508 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 536


>gi|23500808|ref|NP_700248.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161621136|ref|YP_001595022.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|254703399|ref|ZP_05165227.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254710693|ref|ZP_05172504.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256015850|ref|YP_003105859.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|256029076|ref|ZP_05442690.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256058757|ref|ZP_05448974.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256157266|ref|ZP_05455184.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256253757|ref|ZP_05459293.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167846|ref|ZP_05754657.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|260567673|ref|ZP_05838142.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261220891|ref|ZP_05935172.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261318262|ref|ZP_05957459.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261322696|ref|ZP_05961893.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261754026|ref|ZP_05997735.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|261757282|ref|ZP_06000991.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986060|ref|ZP_06098617.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265995753|ref|ZP_06108310.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|23464467|gb|AAN34253.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161337947|gb|ABX64251.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|255998510|gb|ACU50197.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260154338|gb|EEW89419.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260919475|gb|EEX86128.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261297485|gb|EEY00982.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261298676|gb|EEY02173.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261737266|gb|EEY25262.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261743779|gb|EEY31705.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|262550050|gb|EEZ06211.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264658257|gb|EEZ28518.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 380

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|311112528|ref|YP_003983750.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
 gi|310944022|gb|ADP40316.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
          Length = 571

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 33/272 (12%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
           +I  GLTE+  G+D+ + +   +K SDG + L+G KW +++     A  +LA+     G 
Sbjct: 122 SISWGLTERGHGSDLLSTSVMARKTSDGGWALNGEKWMINNATRGRALTILARTGDEPG- 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN----ATVELEFSNTFGFLLGDLNVSTG---- 307
              PR L       L Y   +   G         T  +  ++  G  L D  +  G    
Sbjct: 181 ---PRSLS------LFYMDKEEAQGTWEYLPKIQTHGIRGADISGITLRDTKIPQGRLIG 231

Query: 308 -PVEDMKILIYLDSAI------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P + ++I++            +S+      L+ A+ +A  R+  G IL+D P  +  +A
Sbjct: 232 APGDGLEIVLRCLQVTRPLCTALSLGAADSGLSAALEFAAGRNTMGHILLDLPAAQDQLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+D+A A  +S   A       S       A +++P  KY    +   ++      IG
Sbjct: 292 DVAVDLAIAELMSVMGARHLQLNPSE------ASVISPSVKYLVPHIVDDIMVRITRFIG 345

Query: 421 GSGYIEERSIARHYRESPANSIL-LGSGNAMV 451
               + +  +    +    N ++ +  GN++V
Sbjct: 346 ARAVLADGQLGHVQKTVRDNRVVSIFDGNSVV 377


>gi|107025485|ref|YP_622996.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116693333|ref|YP_838866.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|254249891|ref|ZP_04943211.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|105894859|gb|ABF78023.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
 gi|116651333|gb|ABK11973.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
 gi|124876392|gb|EAY66382.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 393

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|317402667|gb|EFV83221.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 389

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 21/269 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+  + +   D  Y L+G K W  +  ++D + + A+     G   +
Sbjct: 133 FALSEPDAGSDVAALACEARLEGDH-YVLNGAKTWISNGGIADFYCVFARTGEAPGARGI 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
              + D    G         I     AT+  +      S   G       ++      M 
Sbjct: 192 SAFVVDADTPGFEISERIELIAPHPLATITFDNCRIPVSQRLGEAGQGFKLAM-----MT 246

Query: 314 ILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + I+  S   +  G  R +L E +  AR R + G  L D  + + A+ D+A  I A+  L
Sbjct: 247 LDIFRASVAAAALGFARRALDEGLARARSRRMFGQTLADLQLTQAALGDMATAIDASALL 306

Query: 373 SFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++R A   D  K R+  EAA A++ A        + A +VI  A++  GG+G +    + 
Sbjct: 307 TYRAAWMRDVQKQRTTREAAMAKMTA-------TESAQSVIDRALQMFGGAGVVSGMPVE 359

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + YRE  A  I  G+     L +   L K
Sbjct: 360 KLYREIRALRIYEGATEVQKLIIARELLK 388


>gi|258511817|ref|YP_003185251.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478543|gb|ACV58862.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 397

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +       GLTE   G+D+AA+ +   +  D  Y L+G K W   + ++D F++ A 
Sbjct: 113 PQARGEKIGAFGLTEPNAGSDVAAMRTTAVRDGDS-YILNGSKIWISLADVADHFLVFAY 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +       +  F+V R  E     G   + +K K+G R+  T EL F        N  G
Sbjct: 172 TDRSKKHHGITAFIVERGWE-----GFSTRSIKGKLGIRAGNTGELFFDHVRVPIENRLG 226

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +++ +  +   +     + +  S    + Y   R   G  +    +++
Sbjct: 227 EEGEGFKIAMSALDNGRFTVAAGACGCIAACLEAS----VKYCHERETFGQPIGKHQLVQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IA +A ++  +  L +R     ++    + E + A+ +A       C  A    ++A+
Sbjct: 283 QMIAKMAANLDISRLLVYRAGWLKNQGLPNTRETSLAKWVA-------CDAAWEAASDAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  G  GY  E  + R+ R + A  I  G+
Sbjct: 336 QIHGAYGYSNEYPVERYLRNAKAPVIYEGT 365


>gi|170750182|ref|YP_001756442.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656704|gb|ACB25759.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 381

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++  D  Y LSG K F+S +  SD ++ + +        +   
Sbjct: 124 LTEPGSGSDAAALRTRAERDGD-HYVLSGEKQFISGAGASDLYVCMVRTGEAGPSGISAI 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P GL +   + K+G  +  T  + F        N  G       ++   ++  +
Sbjct: 183 VVEKGTP-GLSFGADERKMGWNAQPTRAVRFDGCRVPVGNRLGAEGQGFKIAMSGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L +A+ Y   R   G  L D   ++  +AD+A  +  +    
Sbjct: 242 LNI----AACSLGGAQAALDKALAYMGDRRAFGARLTDFQALQFRLADMATSLEVSRTFL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A + D AK  S     A  +  + K      A  V  +A++  GG GY+ E  + + 
Sbjct: 298 RHAAAALD-AKDPS-----ATQLCAMAKRHVTDAAFEVANQALQLHGGYGYLAEYGVEKI 351

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461
            R+   + IL G+   M L +   L  G
Sbjct: 352 VRDLRVHQILEGTNEIMRLIIARGLTGG 379


>gi|52421177|dbj|BAD51425.1| butyryl-CoA dehydrogenase [Butyrivibrio fibrisolvens]
          Length = 387

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 28/265 (10%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE--- 250
           SV   L L +   G    A+ S+  K     + L+G K F+++   +D +I++A  +   
Sbjct: 124 SVLQSLALVQTLQGVQTKAVLSEDGKT----WTLNGSKCFITNGKEADVYIIIAYTDIVE 179

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              GR        ++E  +P G  +   ++K+G R +AT EL F +    ++   N    
Sbjct: 180 DKKGRKQKKFTAFIVEKDTP-GFTFGTKEHKMGIRGSATYELIFQDC---VIPAENQLGA 235

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             +   I ++ LD   + ++   + LAE      I Y + R   G  +      +  +A+
Sbjct: 236 RGKGFPIAMHTLDGGRIGIAAQALGLAEGALERTIAYVKERKQFGRSIAQFQNTQFQLAN 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A ++ AA  L ++ A +       S EAA A++ A  T       A  V  + ++ +GG
Sbjct: 296 LATEVEAAQLLVYKAAEAKRTQDRYSVEAAKAKLFAAET-------AMDVTTKCVQLLGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GYI E  + R  R++    I  G+
Sbjct: 349 YGYIREYEVERMMRDAKITEIYEGT 373


>gi|319779856|ref|YP_004139332.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317165744|gb|ADV09282.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 382

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 31/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E R G+D+A       +  D  Y L+G K W  +  ++D +++ A+     G   +
Sbjct: 125 FALSEPRSGSDVANTEMTATRDGDS-YVLTGEKTWISNGGIADLYVVFARTGEAPGAKGL 183

Query: 259 PRLLEDGSPNGL-CYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              L  G   GL   +RL+    + +   S   V L  +   G           P +  +
Sbjct: 184 SAFLVPGDAKGLGIAERLEVIAPHPLARLSFERVRLPVTALIG----------KPGDGFR 233

Query: 314 ILIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I + +     S  G       R +L E+I     R + G  + +  +++  IAD+ALD+ 
Sbjct: 234 IAMSVLDVFRSTVGAAALGFARRALDESIKRVAERKLFGAPMAELQMVQGHIADMALDVD 293

Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L +R A + D   +R + EAA A++ A          A  VI +A++  GG G  +
Sbjct: 294 AAALLVYRAAWTKDMGAARVTREAAMAKLFA-------TDKAQEVIDKAVQLHGGDGVRK 346

Query: 427 ERSIARHYRESPANSILLGSGN 448
              +   YRE  A  I  G+ +
Sbjct: 347 GHIVESLYREIRALRIYEGASD 368


>gi|107022415|ref|YP_620742.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116689363|ref|YP_834986.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892604|gb|ABF75769.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647452|gb|ABK08093.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 609

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 122/315 (38%), Gaps = 65/315 (20%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
           L+E + G+ ++ I +    +G       Y L+G+K ++S    +       ++LA++   
Sbjct: 163 LSEPQAGSSLSDIATRADFEGASPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222

Query: 250 EGR-------VGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L        G  N +    L +K+G R      L F     
Sbjct: 223 HGRLQPGTRGISLFIVPKFLTGTDGDASGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   G+L+G  N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 283 YRPEGRAGAIGYLVGQPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337

Query: 341 RR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R                   ++D P ++R +      +    AL    A   DEA++  
Sbjct: 338 NRPQGRPLGPAAKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALILYCAKLVDEARAHG 397

Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  A A       I+ PI K W  +   A    A++  GG GY  + ++ R YR++  N 
Sbjct: 398 DATARAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     LD+L 
Sbjct: 458 IHEGTHGIQALDLLG 472


>gi|330965352|gb|EGH65612.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 387

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|163754130|ref|ZP_02161253.1| ribonuclease HII [Kordia algicida OT-1]
 gi|161326344|gb|EDP97670.1| ribonuclease HII [Kordia algicida OT-1]
          Length = 380

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  +  +    + D  Y ++G K W  S   +D ++++AQ +   G      
Sbjct: 125 LSEPEAGSDATSQKTTAIDMGDH-YVINGTKNWITSGGRADVYLVIAQTDKDKGHRGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V    E G+P G      ++K+G R + T  L+F++             FGF      
Sbjct: 184 FIV----EKGTP-GFDIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +S G        I + +  + ++     LA  + Y++ R   G  + +   +   +AD+ 
Sbjct: 239 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I AA  L    A   D  ++    +A A++ A        K A  V  EA++  GG+G
Sbjct: 290 IEITAARHLVMEAACKKDAKENYDMASAVAKLFA-------SKTAMDVTVEAVQVHGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           +++E  + R  R++    I  G+
Sbjct: 343 FVKEYHVERLMRDAKITQIYEGT 365


>gi|109109376|ref|XP_001083487.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Macaca
           mulatta]
          Length = 415

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 44/269 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGGGESDIYVVMCRTGGPGPKGISCV 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           +V    E G+P GL + + + K+G  S  T  + F +        +GD        E   
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPLANRIGD--------EGQG 265

Query: 314 ILIYLDSAIMSVSGMRVSLAE----AIH--------YARRRHVSGGILIDQPVMKRAIAD 361
            LI    A+  ++G R+++A     A H        + + R   G  L     ++  +AD
Sbjct: 266 FLI----AVKGLNGGRINIASCSLGAAHASVILTRDHLKVRKQFGEPLASNQYLQFTLAD 321

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG
Sbjct: 322 MATRLVAAR-LMIR-----NAAVALQEERKEAVALCSMAKLFATDECFAICNQALQMHGG 375

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+++ ++ ++ R+S  + IL GS   M
Sbjct: 376 YGYLKDYAVQQYMRDSRVHQILEGSNEVM 404


>gi|150249475|gb|ABR67753.1| CmnJ [Saccharothrix mutabilis subsp. capreolus]
          Length = 383

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 28/296 (9%)

Query: 170 VHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           V  D    + +R   P  +     P  +  +   L  TE  GG+D+ A+T+   +   G 
Sbjct: 89  VQTDIVAPLLARAGTPEVRRDVLRPAIRGELVAALAATEPAGGSDLGALTTTAVRTERG- 147

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+++  ++D  ++L +     G   +  L+   +  G+   R   K+G+RS 
Sbjct: 148 FTVNGTKAFITNGSVADFAVVLCRTGEAAGIGDLALLVVPTNLAGVRQVRHTGKLGHRSC 207

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS----AIMSVSGMRVSLAEAIH 337
               L F++      +LLG++    G   +++   +       A++++      L   +H
Sbjct: 208 DHGTLTFTDVEVPAAYLLGEV----GEGYELQTRTFTRERCFLAVVALGQAERVLRATVH 263

Query: 338 YARRRHVSGGILIDQPVMKRAIA--DIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +ARRR V G  L D   +   +A  D  LD+  + A          EA     + A    
Sbjct: 264 HARRRRVLGRALTDHQAIGFRLAELDAELDLVRSYA---------GEAYQLLADGAQCLR 314

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A I K    ++   V    ++  G +GY+    + R YR++ A S   G+  A++
Sbjct: 315 EASIAKLRATRLLREVADVGLQVRGAAGYLGVDDVERTYRDARAGSFAGGADEALL 370


>gi|119475210|ref|ZP_01615563.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451413|gb|EAW32646.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 388

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 35/277 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVG-- 254
           LTE   G+D  ++ S  +K     Y L+G K F+S    +D  +++A    Q EG  G  
Sbjct: 124 LTESGAGSDAGSLRSTAKKQGQ-QYLLNGSKMFISGAGDTDVLVVMARTGTQEEGSAGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-EDMK 313
            F +P  L     +G+ Y + + K+G  S  T  + F N    +L D +   G   E  K
Sbjct: 183 AFAIPAQL-----DGIHYGKNEAKMGWNSQPTRAISFEN----VLVDQDSLLGQEGEGFK 233

Query: 314 ILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   ++++   +  A+A       Y   R   G  L     ++  +AD+  ++ 
Sbjct: 234 IAMRGLDGGRINIATCSIGAAQACINHSQKYMLERQQFGKPLAAFQALQFKLADMLTELI 293

Query: 368 AATALSFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           AA  +  RLA S  +A    +S   A A+  A    +  C        +AM+  GG GY+
Sbjct: 294 AARQM-VRLAASKLDADDVDKSTYCAMAKRFATDAGFNICN-------DAMQLHGGYGYL 345

Query: 426 EERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461
           +E  + R  R++  + IL G+   M V+    L E G
Sbjct: 346 KEYPLERFMRDARVHQILEGTNEIMRVITARRLFEVG 382


>gi|119717728|ref|YP_924693.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614]
 gi|119538389|gb|ABL83006.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614]
          Length = 399

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 33/276 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255
           G GLTE   G+D  A  ++   + +G + ++G K F+++  S+    +  V  R G    
Sbjct: 128 GFGLTEPGAGSDAGATKTRA-VLENGEWVVNGSKQFITNSGSE-LTSVVTVTARTGTREN 185

Query: 256 -------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                   +VP     G+P G   ++  +K+G  ++ T  L   +       LLG+    
Sbjct: 186 GSAEISTIMVP----SGTP-GFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG 240

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
                  + L  LD   ++++ + V   +A     + YA  R   GG +  +  +   IA
Sbjct: 241 Y-----AQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECI 419
           D+ + + A+  L++R A   D  +     +    +  A + K +  + A      A +  
Sbjct: 296 DLEVMLHASRLLTYRAAAMKDSQRDGGGASMKEFKQAAAVAKLYATESAVTATRIATQVF 355

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG G++EE  +AR YR+  A  + +G G + V  +L
Sbjct: 356 GGYGFMEEYPVARFYRD--AKVLEIGEGTSEVQRLL 389


>gi|325675374|ref|ZP_08155058.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553345|gb|EGD23023.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 382

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+  + +    I DG  Y ++G K F++S +   F++ A   G  G   V
Sbjct: 124 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGAKTFITSAVRADFVVTAVRTGGPGAGGV 181

Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             L +E G+P G    R  +K+G R++ T EL F +       L+G+ N     +    +
Sbjct: 182 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFL 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A  + +  +  L   + + R R   G  LI +  ++  + ++   +  A   + 
Sbjct: 241 TERIALAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTR 300

Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            L   S    +    E  +A+  A     W       V  +A++  GG GY+ E  + R 
Sbjct: 301 TLVERSLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQ 353

Query: 434 YRESPANSILLGSGNAMVLDVL 455
           YR+     + +G G   +L  L
Sbjct: 354 YRD--MRILGIGGGTTEILTSL 373


>gi|312114593|ref|YP_004012189.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219722|gb|ADP71090.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 395

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 25/242 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ +K +DG + LSG K W  +SP++D F++ A+ + G +  F+
Sbjct: 138 FGLTEPDAGSDPGSMKTRARK-TDGGWLLSGSKIWITNSPVADVFVVWAKDDAGIIKGFI 196

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILI 316
           + + ++     GL   +++ K   R++ T E+   + F   + D N     VE +K    
Sbjct: 197 LEKGMK-----GLSAPKIEGKFSLRASITGEIVMESVF---VPDEN-RLPNVEGLKGPFG 247

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   ++   +  AE   +A R++       G  L +  +++  +A++  +IA    
Sbjct: 248 CLNRARYGIAWGVLGAAEFCFHASRQYTLDRKQFGRPLANTQLVQLKLANMETEIALGLH 307

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              RL   FDE K   E       M  + K   C  A  +   A +  GG+G  +E  + 
Sbjct: 308 ACLRLGRLFDEQKMAPE-------MISMLKRNNCGKALDIARIARDMHGGNGISDEFHVI 360

Query: 432 RH 433
           RH
Sbjct: 361 RH 362


>gi|312116094|ref|YP_004013690.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221223|gb|ADP72591.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 378

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D +AI +  ++  D  + ++G K F+++   +D  I+ A  +   G      
Sbjct: 123 LTEPHVGSDASAIATTARRDGDS-FIINGAKQFITTGKHADVAIVFAVTDKSAGKKGISA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP      +  G    R+++K+G +++ T ++ F N       LLG       ++   
Sbjct: 182 FLVPT-----ATPGYVVARIEDKMGQKASDTAQILFENCRVPASALLGKEGDGYRIALSN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  +V   R +L  A+ YA+ R   G  +I+   +   +AD+A ++ A
Sbjct: 237 LEAGRIGI----ASQAVGMARAALEAAVAYAKERQTFGKPIIEHQAVSFRLADMATEVDA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A   D      +EA+ A++ A        +MA  V + A++  GG GY+ + 
Sbjct: 293 ARLLVWRAAMLKDAGLPCLKEASMAKMFAS-------EMAERVCSGAIQVHGGYGYVSDF 345

Query: 429 SIARHYRESPANSILLGSGN 448
            + R YR+     I  G+ +
Sbjct: 346 PVERIYRDVRVCQIYEGAND 365


>gi|261202146|ref|XP_002628287.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239590384|gb|EEQ72965.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239612094|gb|EEQ89081.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 410

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 43/289 (14%)

Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK     GL          ++E   G+D+ ++ +  + + DG + L+G K W  +
Sbjct: 119 NGSPEQKARFLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITN 177

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F   F 
Sbjct: 178 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEGVFV 237

Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347
               +LG+LN        +K+L+    L+  ++S      M+ +L   + Y   R   G 
Sbjct: 238 PRENMLGELN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGI 291

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----------RSEEAAYARIMA 397
            +    +++  +AD+   ++A+ A ++  A   DEA +          R+++ A A + A
Sbjct: 292 PIARNQLIQGKLADMYTKLSASRAYTYTTARQIDEAAASSSEASNSAIRTQDCAGAILYA 351

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 C         +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 352 AERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 393


>gi|167589376|ref|ZP_02381764.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 393

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|167577576|ref|ZP_02370450.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 393

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +     + L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-RFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S      +AR        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--AHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|146092445|ref|XP_001470295.1| acyl-coa dehydrogenase [Leishmania infantum]
 gi|134085089|emb|CAM69490.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5]
          Length = 629

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 55/363 (15%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++A    G  M   ++  +   LM+  +  +   + PK+ S E+  T             
Sbjct: 144 MIATANWGFSMYSGLSLGACRTLMSWASDELKDQYLPKLVSGEWSGT------------- 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253
           + LTE + GTD++ + ++ +   DG  Y ++G K F+S+    ++D  I  +LA++   +
Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSL 250

Query: 254 ------GCFLVPRLL--EDGSPNGL----CYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   FLVPR +  +DGS  G     C   L+ K+G + ++T +L F N+ G+L+G+
Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEGAKNVECIA-LEKKMGIKGSSTCQLSFHNSVGYLIGE 309

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVMKRA 358
            +     +        +  A+  V    ++    + YAR R      GG    + V  R 
Sbjct: 310 PSAGMKQMFTFMNAARVGCALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRI 369

Query: 359 I--ADIALDIAAATALS-------FRLANSFDEAKSRSEEAAYARI------MAPITKYW 403
           I  A++  ++  A A++         +    D   +  + A    +        PI K  
Sbjct: 370 ICHANVRQNVLFAKAIAEGGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKAC 429

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
             +      +  ++  GG GYI+   + +  R+S   +I  G+     LD +    L  K
Sbjct: 430 VTEWGVEAASRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTK 489

Query: 461 GTN 463
           G N
Sbjct: 490 GGN 492


>gi|160900259|ref|YP_001565841.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160365843|gb|ABX37456.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 382

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 91/416 (21%), Positives = 162/416 (38%), Gaps = 92/416 (22%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHP----------AWHALLRRSIHDGLHCSI-------- 119
           +++TP+L +      R+ + E  P            HA+ RR+   GL C+         
Sbjct: 8   SWSTPELESLRATAVRFLETEMQPQDEAARQRGNVGHAIWRRAGELGLLCTDIPEDYGGG 67

Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D   E V+ ++      AR  L         MS SV S     L+     H   A K 
Sbjct: 68  GGDFRHEAVIHEEM-----ARRALSG-------MSNSVHSIVAHYLLN----HGTEAQK- 110

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
             R+Y P     M +  +   + +TE   G+D+  + ++ + + DG Y ++G K F+++ 
Sbjct: 111 --RKYLPA----MARGELVGAIAMTEPGAGSDLQGVRTRAE-LRDGRYRINGSKTFITNG 163

Query: 239 MSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +    I++       +G  G  ++  ++E     G    R+ +K+G ++  T EL F + 
Sbjct: 164 LLAGLILVVCKTDPAQGARGTSIL--IVETRDCAGFRVGRVLDKMGMKAQDTSELFFDDV 221

Query: 295 F-------------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                         GF  L+GDL     P E + I       + +++ M  +    + Y 
Sbjct: 222 TVPQDALLGGREGQGFYQLMGDL-----PYERLII------GLTALACMEGAYEATLAYV 270

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR-----LANSFDEAKSRSEEAAYAR 394
           R R   G  + D    +  +A++A  +    A   R     +A + D A           
Sbjct: 271 RERRAFGQAIADMQNTRFKLAEVATTLTVGRAFIDRCVEQLVAGTLDTAT---------- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + K W  +    V+ E ++  GG GY+ E  + R Y ++    I  G+   M
Sbjct: 321 --ASMAKLWGSEAQGRVLDELVQLHGGYGYMNEYMVTRMYADARVQRIYGGTSEIM 374


>gi|59803160|gb|AAX07730.1| isovaleryl-CoA dehydrogenase-like protein [Magnaporthe grisea]
          Length = 470

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           L ++E   G+D+ ++ ++  + +DG  + L+G K W  + P +D  I+ A+ +       
Sbjct: 205 LAMSESGSGSDVVSMRTRATRTADGSGWLLNGSKMWITNGPDADVIIVYAKSDTECQPSK 264

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
            +  F+V R      P   C ++L +K+G R + T EL   N       +LG++N     
Sbjct: 265 GITAFIVER-----QPGLQCLRKL-DKMGMRGSNTGELVLENVIVPDENVLGEVNAGXRV 318

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +   L  L  +   +  M+ +L  A+ YA  R   G  + +  +++  +AD+   +  
Sbjct: 319 LXEGLDLERLVLSAGPLGIMQAALDVALPYAHARQQFGRPIAEFQLVQGRLADMYTKLQV 378

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A ++  A   DE    S E   A     I   +  + A  V  + ++ +GG GY E+ 
Sbjct: 379 SRAYTYATARRIDE----SGEIKTADCAGAI--LYAAERATEVALDCIQVLGGMGYTEDM 432

Query: 429 SIARHYRESPANSILLGSGNAMV 451
             +R  R++    I  G+G + V
Sbjct: 433 PASRLLRDAKLYEI--GAGTSEV 453


>gi|322368810|ref|ZP_08043377.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320551541|gb|EFW93188.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 374

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 40/264 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254
             L+E   G++ A ++++ ++  D  Y ++G K W  +   +D  ++ A+ +      V 
Sbjct: 120 FALSEPEAGSNPAEMSTEARREGDE-YVINGKKQWITNGKRADVIVLFAKTDRDDPRSVT 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+VP+        G+   + + K+G R++ T  L F +        +       E+ K 
Sbjct: 179 QFVVPK------DAGVEVGKKEEKLGLRASDTTSLIFDDVR------IPAEYRLTEEGK- 225

Query: 315 LIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADI 362
              L +A   ++G R+ +A            +A+ YA+ R      + D   ++  +AD+
Sbjct: 226 --GLSAAFHILTGGRIGIASQAVGLSQAALDQAVEYAQDREQFDRPIADIQTIRHKLADM 283

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A   L+   A   D  +  +  A+ A       KY+  + A  +  EA++  GG 
Sbjct: 284 QTKLQAGRLLTRDAARRADNGEDHAAAASMA-------KYFASESAVEITNEAVQIHGGY 336

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  +  + R YR+S   +I  G+
Sbjct: 337 GYTTDFDVERFYRDSKITTIYEGT 360


>gi|213967035|ref|ZP_03395185.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301385220|ref|ZP_07233638.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059613|ref|ZP_07251154.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302130161|ref|ZP_07256151.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213928357|gb|EEB61902.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
          Length = 387

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCINQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGALDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|254460173|ref|ZP_05073589.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206676762|gb|EDZ41249.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 407

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D   + ++  K + G Y ++G K W  +SP++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPGGMKTRAVKTATG-YKITGSKMWISNSPIADVFVVWAKSEEHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++ NK+  R++ T E+   N       LL ++    GP    
Sbjct: 208 F----VLEKGM-TGLSAPKIGNKLSLRASITGEIVMDNVEVGEDALLPNVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA
Sbjct: 259 --FGCLNRARYGISWGVMGAAEFCWHGARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIA 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S ++    D A +  E       M  I K   C  A  +   + +  GG+G   E
Sbjct: 317 LGLQASLQVGRLMDAANAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISAE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FGVIRH 375


>gi|327439890|dbj|BAK16255.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 388

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 33/258 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV-------EGRV 253
           LTE   G+D   I  Q + + DG  + L+G K F+++     F M+  V        G V
Sbjct: 128 LTEPDAGSDARGI--QMRAVKDGDHWVLNGEKVFITNGNEADFAMVFAVTDKEKGANGGV 185

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-----VELEFSNTFGFLLGDLNVSTGP 308
            CFLV +  E G  +   Y      +G    AT     V +   N  G L    N+    
Sbjct: 186 TCFLVDK--EMGWKSEYIY-----TMGEWGPATLVFDNVRVPEENILGELGQGFNLGMQW 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   + +I       ++      L  AI Y++ R   G  + ++  ++  IAD A++I A
Sbjct: 239 IGQGRYMI----PAGAIGAAERLLQMAIDYSKTRVTFGKPIAERQAIQWMIADSAVEIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + FR A   +       +++ A++   I       MA  V+   ++  GG GY +E 
Sbjct: 295 AKWIVFRAAWMAENGMDPRHQSSMAKLNGAI-------MANQVVDRVLQIHGGMGYTKEL 347

Query: 429 SIARHYRESPANSILLGS 446
            I R YRE     I  G+
Sbjct: 348 PIERWYRELRLYRIFEGT 365


>gi|326481986|gb|EGE05996.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 435

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
            + +    G    + + K+G R+++T  L F +       LLG+        +  K  I 
Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288

Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            L+   + ++     LA       A +    R   G ++     M+  +A    +IAAA 
Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL F  A   +  +   ++AA A++       +  ++A  V   A+E +GG G++ E   
Sbjct: 349 ALVFNAARKKEVGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R+S   +I  G+ N  +  +   L+K
Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|225679793|gb|EEH18077.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 522

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 246 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 305

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N      +  K
Sbjct: 306 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFEDVKVPVENLIGKEN------QGFK 358

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 359 VIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGNRLIDHPVIRMKLAHMARQIE 418

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 419 ASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 475

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 476 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 504


>gi|209519297|ref|ZP_03268097.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209500246|gb|EEA00302.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 382

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 28/270 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244
           AP+          LTE + G++   + ++ + + DG + L+G K F++    + ++  F 
Sbjct: 115 APLASGKAIGAFCLTEPQAGSEANNLKTRAE-LRDGKWVLNGSKQFVTNAQRAKIAIVFA 173

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +   + G+ G   F+VP      +P G      + K+G R++ T  +   N     + + 
Sbjct: 174 VTDPLAGKKGLSAFIVP----TDTP-GFIVGHPEKKMGIRASDTCPITLDNC---AIPEA 225

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356
           N+   P E +KI L  L+   + ++     +A A       YA  R   G  +I    + 
Sbjct: 226 NMLGRPGEGLKIALANLEGGRIGIAAQSAGIARAAFEAARVYANDRQQFGTAIIKHQSVA 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+   I AA  L    A      K    EA+ A       K +  ++A  V + A+
Sbjct: 286 NMLADMHTKINAARHLVHHAARLRTLGKPCLSEASQA-------KLYASEIAEQVCSAAI 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG G++ +  + RHYR++    I  G+
Sbjct: 339 QIHGGYGFLNDYPVERHYRDARITQIYEGT 368


>gi|254705458|ref|ZP_05167286.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|261312865|ref|ZP_05952062.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261301891|gb|EEY05388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
          Length = 376

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDRDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|170698594|ref|ZP_02889663.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170136528|gb|EDT04787.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 393

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-CYVLNGTKMWITNGPDCDTLVVYAKTDLDAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN        +K+L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNCG------VKVL 241

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     +SG     M   L   + Y   R   G  + +  +++  +AD+     A 
Sbjct: 242 MSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQAC 301

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  
Sbjct: 302 RAYLYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYP 359

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 360 VGRLWRDAKLYEIGAGT 376


>gi|15598085|ref|NP_251579.1| citronellyl-CoA dehydrogenase involved in catabolism of citronellol
           [Pseudomonas aeruginosa PAO1]
 gi|107102438|ref|ZP_01366356.1| hypothetical protein PaerPA_01003500 [Pseudomonas aeruginosa PACS2]
 gi|116050892|ref|YP_790285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890912|ref|YP_002439778.1| putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa LESB58]
 gi|254235876|ref|ZP_04929199.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719]
 gi|254241554|ref|ZP_04934876.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192]
 gi|296388624|ref|ZP_06878099.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|9948980|gb|AAG06277.1|AE004715_3 putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa PAO1]
 gi|115586113|gb|ABJ12128.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167807|gb|EAZ53318.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719]
 gi|126194932|gb|EAZ58995.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192]
 gi|218771137|emb|CAW26902.1| putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa LESB58]
          Length = 386

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 14/264 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++      G+      +K+G RS+ T ++ F N        +  + G    M++L + 
Sbjct: 182 SLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 240

Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +      + G+   +   I Y + R   G  LID  V+   +A++  ++ A  AL +
Sbjct: 241 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  ++R Y
Sbjct: 301 QATELYVKGRDVTRLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVSRAY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++   SI  G+   M+  +  L+
Sbjct: 354 RDTRLVSIGGGADEIMLGIICKLM 377


>gi|207727712|ref|YP_002256106.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590953|emb|CAQ56565.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 376

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D AA+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      S  G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG 224

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AQGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|162455908|ref|YP_001618275.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161166490|emb|CAN97795.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 575

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 60/277 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV----EGR- 252
             LTE   G+D AAI ++ +  +DG  Y L+G K W  +   +D F + A+     EG+ 
Sbjct: 149 FALTEPGAGSDAAAIRTRAELSADGSYYTLNGSKIWITNGGFADVFTVFARTSALEEGKK 208

Query: 253 --VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297
             +  F+V R +   S PN       + K+G R ++T EL F +              GF
Sbjct: 209 PKLTAFIVERSMGVKSGPN-------EQKLGIRGSSTTELFFDDVKVPRENVLGEVGKGF 261

Query: 298 LL-------GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            +       G L +S G V     LI +                A+   + R   G  + 
Sbjct: 262 KVAVEVLNNGRLGLSAGCVGACNTLIRM----------------ALDRVQERRAFGRSIG 305

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           D  ++K  IA +     A  ++++  A+  D +    S E+A  ++M   T ++      
Sbjct: 306 DFGLIKDKIATMLAHTYALESITYLTASLVDAKVPDFSIESAICKVMGSETLWF------ 359

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            V+ E ++   G GY+EE    RH R++  N I  G+
Sbjct: 360 -VVNETLQIAAGIGYMEEYPYERHLRDARINMIFEGT 395


>gi|109123600|ref|XP_001110300.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 1
           [Macaca mulatta]
          Length = 428

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   R++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN----MLPGASSLGGPFG 288

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  S     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 289 CLNNARYGIAWGVLGAS--EFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLG 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 347 LHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 399

Query: 430 IARH 433
           + RH
Sbjct: 400 VIRH 403


>gi|109123598|ref|XP_001110430.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 3
           [Macaca mulatta]
          Length = 438

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   R++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN----MLPGASSLGGPFG 288

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  S     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 289 CLNNARYGIAWGVLGAS--EFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLG 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 347 LHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 399

Query: 430 IARH 433
           + RH
Sbjct: 400 VIRH 403


>gi|326383715|ref|ZP_08205400.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197479|gb|EGD54668.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 382

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 35/256 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
           G GLTE   G+D  A  +  ++  D  + ++G K F+++  +D  + + +  V G+    
Sbjct: 120 GFGLTEPGAGSDAGATATTAREDGD-EWVINGGKQFITNSGTDITSLVTVTAVTGQRDNG 178

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
              +   +VP     G+P G   +   NK+G  ++ T  L F +       LLG+     
Sbjct: 179 RKEISTIIVP----SGTP-GFTAEPAYNKVGWNASDTHPLSFDDARVPRENLLGERGRGY 233

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
                   L  LD   ++++G+   +A     E+I YAR R   G  + +   +  AIA 
Sbjct: 234 A-----NFLSILDEGRIAIAGLATGVAQGCVDESIKYARERKSFGKAIAEFQSVSFAIAR 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +      A    +  A      +   +EAA A++++        +MA        +  GG
Sbjct: 289 MEARAHVARMAYYDAAAKMLAGQPFKKEAAIAKMVSSEAAMDNARMA-------TQIHGG 341

Query: 422 SGYIEERSIARHYRES 437
            G++ E  +ARHYR+S
Sbjct: 342 YGFMNEYPVARHYRDS 357


>gi|311108128|ref|YP_003980981.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762817|gb|ADP18266.1| acyl-CoA dehydrogenase, N-terminal domain protein 18 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 33/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A I+ +  +  D  + ++G K++ +      FI+   V  R    + P+ 
Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGSKYWCTFADDADFIL---VICRSDPVVDPQA 178

Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303
              G        P G   + ++     KIG     T EL F N       ++GD      
Sbjct: 179 RHKGLSAFMIEKPRGELPEGVQGSVIPKIGYHGWTTWELAFDNCRVPHSAMVGDEGKAFY 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++   +E  +      +A  S+   + SL ++I YA++R   G  + D   ++  IAD+A
Sbjct: 239 LACAGLETARA----HTAARSIGLAQGSLEDSIQYAKQRAQFGRPIADFQAIRFKIADMA 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+ AL + +    D       EA+  +++A        +M+  V +E ++  GG+G
Sbjct: 295 TQIEASRALLYAVCEKIDRGVRTDTEASMVKLLA-------SEMSERVTSEGLQVHGGAG 347

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y    +  R++R++    I  G+
Sbjct: 348 YTTHCAAERYWRDARLTKIFEGT 370


>gi|228915676|ref|ZP_04079262.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228843962|gb|EEM89025.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 395

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 253

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +Y+ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 254 LYIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 313

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 314 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|254238903|ref|ZP_04932226.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719]
 gi|254244753|ref|ZP_04938075.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192]
 gi|126170834|gb|EAZ56345.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719]
 gi|126198131|gb|EAZ62194.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192]
          Length = 381

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 127 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 185 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 244 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 294 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 347 FMWEYPVARAWADARVQRIYAGTNEIM 373


>gi|194363998|ref|YP_002026608.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346802|gb|ACF49925.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 388

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ +   +  D  Y L+G K F+S   +   +++    G  G   V  +
Sbjct: 128 LTEPGAGSDAASLKTTAVRDGD-FYVLNGSKAFISGAGATELLVVMARTGGAGAGGVSAI 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKI 314
                  G+ + R + K+G  S  T  + F N         G   G   ++   ++  +I
Sbjct: 187 AVPADLPGISFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGGGFKLAMKGLDGGRI 246

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+   + +L  A  Y   R   G  L +   ++  +AD+A+++ AA  +  
Sbjct: 247 NI----AACSLGAAQGALDAARRYMGERRQFGKTLSEFQALQFKLADMAIELVAARQMVH 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D   S       A +   + K +       +  EA++  GG GYI E  I R  
Sbjct: 303 TAARKLDAGASD------ANVWCAMAKRFATDAGFNICNEALQIHGGYGYIREYPIERLL 356

Query: 435 RESPANSILLGSGNAM 450
           R+S  + IL G+   M
Sbjct: 357 RDSRVHQILEGTNEIM 372


>gi|160896146|ref|YP_001561728.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361730|gb|ABX33343.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 380

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ +  ++  D  Y L+G K F+++ + S+  I++A+    +G   V
Sbjct: 126 IAMTEPGAGSDLKSVRTTARREGDH-YVLNGQKTFITNGINSELVIVVAKTAPEMGAKGV 184

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             ++ EDG P G    R   KIG  +  T EL F N       LLG+ N     +     
Sbjct: 185 SLIVVEDGMP-GFSKGRKLEKIGLMAQDTSELFFDNVRVPADHLLGEENAGFRYLMHELA 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ + + +   L + I Y R R   G     QPV      +    +A A A + 
Sbjct: 244 QERLVVAVRAAASIEAFLHKTIAYTRERKAFG-----QPVFD--FQNTRFKLAEAKAQAT 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L    D+  +     A A   A + K     +   ++ E ++  GG GY+ E  I R +
Sbjct: 297 MLRVFVDDCIALHLRRALAPDRAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQIGRAW 356

Query: 435 RESPANSILLGSGNAM 450
            ++    I  GS   M
Sbjct: 357 TDARIGRIYGGSDEIM 372


>gi|17987804|ref|NP_540438.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225851948|ref|YP_002732181.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|256044131|ref|ZP_05447038.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256112935|ref|ZP_05453843.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256264542|ref|ZP_05467074.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563488|ref|ZP_05833974.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990542|ref|ZP_06103099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265994371|ref|ZP_06106928.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|17983530|gb|AAL52702.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225640313|gb|ACO00227.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|260153504|gb|EEW88596.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262765484|gb|EEZ11273.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001326|gb|EEZ13901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263094875|gb|EEZ18613.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408445|gb|ADZ65510.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M28]
 gi|326538161|gb|ADZ86376.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis M5-90]
          Length = 592

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|54025795|ref|YP_120037.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017303|dbj|BAD58673.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 381

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 31/284 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK  S E             +   + +TE   G+D+  I ++  +  D  + L+G K 
Sbjct: 111 WLPKFCSGE-------------LITAIAMTEPGTGSDLQGIKTRAVRDGDD-WILNGAKT 156

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           F+++ + +D  I++AQ +   G      L+ E G P G    R  +KIG ++  T EL F
Sbjct: 157 FITNGINADLVIVVAQTDPEKGAMGFSLLVVERGMP-GFERGRNLDKIGLKAQDTAELSF 215

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSG 346
           ++    + G   + T  +  + ++  L    MS++ M  +     L     Y R R   G
Sbjct: 216 TDV--RVPGKNLLGTEGMGFIHLMQNLPQERMSIAVMAAAAMEACLDMTCQYVRDRKAFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +      +  +A++A    A   +  R     +  K  +E+AA A       K+W  +
Sbjct: 274 KPIGALQNTRFVLAELATKTTAVRIMVDRFIEDLNAGKLSAEDAAMA-------KWWSTE 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               +I   ++  GG GY+ E  IA+ Y ++   +I  G+   M
Sbjct: 327 EQLDLINRCLQLHGGYGYMREYPIAKAYTDARIQTIYGGTTEIM 370


>gi|152985463|ref|YP_001350343.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960621|gb|ABR82646.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 378

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370


>gi|332973086|gb|EGK11021.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 591

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 38/349 (10%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIF--SREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           L++  +  A   AL     V     P +F  ++E       P+          LTE   G
Sbjct: 95  LITEKIAPARSFALSHGAHVGIGTLPIVFFGNKEQKEKYLPPLASGEKFAAYALTEPGSG 154

Query: 209 TDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
           +D     +  +   DG  Y L+G K W  +S  +D F++ A+V+G +   F+V +     
Sbjct: 155 SDALGAKTVAKLSEDGKHYILTGEKQWITNSAFADVFVVYAKVDGEKFTAFIVEKEF--- 211

Query: 266 SPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIY--LDS 320
              G+     + K+G + ++T  L   E       +LG+  V  G +    IL       
Sbjct: 212 --PGVSTGPEEKKMGIKGSSTRTLILDEARVPVENVLGE--VGKGHLIAFNILNIGRYKL 267

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +  V   + ++  +  YA+ R      +   P+++  +A ++    A  ++ +RLA  F
Sbjct: 268 GVGCVGSSKRAIEISAKYAKERKQFKTPIAQFPLIQEKLATMSAKTYALESVIYRLAGFF 327

Query: 381 DEAKSRSEEAAYARIMAPITKYWC-CKMAPA--------VIAEAMECIGGSGYIEERSIA 431
           ++  +  E+A        I +Y   C +A          V+ E ++  GG G+++E  I 
Sbjct: 328 EKGLAHLEQAEGTEAAKAIAEYALECSIAKVFGSEVLDYVVDEGVQIHGGYGFMQEYEIE 387

Query: 432 RHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
             YR+S  N I  G+     L +            L  LEK   L E+L
Sbjct: 388 NMYRDSRINRIFEGTNEINRLLIPSTLMRKTMKGELPFLEKAAGLQEEL 436


>gi|312140989|ref|YP_004008325.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890328|emb|CBH49646.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 380

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+  + +    I DG  Y ++G K F++S +   F++ A   G  G   V
Sbjct: 122 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGAKTFITSAVRADFVVTAVRTGGPGAGGV 179

Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             L +E G+P G    R  +K+G R++ T EL F +       L+G+ N     +    +
Sbjct: 180 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFL 238

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A  + +  +  L   + + R R   G  LI +  ++  + ++   +  A   + 
Sbjct: 239 TERIALAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTR 298

Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            L   S    +    E  +A+  A     W       V  +A++  GG GY+ E  + R 
Sbjct: 299 TLVERSLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQ 351

Query: 434 YRESPANSILLGSGNAMVLDVL 455
           YR+     + +G G   +L  L
Sbjct: 352 YRD--MRILGIGGGTTEILTSL 371


>gi|300705373|ref|YP_003746976.1| acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CFBP2957]
 gi|299073037|emb|CBJ44394.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CFBP2957]
          Length = 376

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D AA+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      S  G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG 224

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AQGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNA-------SEMAEHVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|325676129|ref|ZP_08155810.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553039|gb|EGD22720.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 388

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 24/259 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVG 254
           + LTE  GG+D+ A+T+  ++  D +       W  ++  S    +L + +        G
Sbjct: 126 MALTEPGGGSDLQAMTTAARQDGDDLVVTGAKTWISNARRSGLIALLCKTDPAAQPRHTG 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
             +V  L+E G   GL   R   K+G +   T EL F         +LG      G  + 
Sbjct: 186 VSVV--LVEHGP--GLTVSRDLPKLGYKGVETCELSFDGYRVPATAILGG-TPGKGFAQM 240

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK L    L  A  ++     +L +++ YAR+R   G  +     +   +AD+A  + AA
Sbjct: 241 MKGLETGRLQVAARALGVGAAALEDSLAYARQRETFGVPIHKHQSIGNYLADMATKLTAA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+   A  +D       EA  A++ A  T       A  +  +A+   GG GY  E  
Sbjct: 301 RQLTRYAAERYDRGDRCDMEAGMAKLFASET-------AMEIALDAVRIHGGYGYSTEYD 353

Query: 430 IARHYRESPANSILLGSGN 448
           + R+ R++P   +++G G 
Sbjct: 354 VERYLRDAPL--MIVGEGT 370


>gi|239927853|ref|ZP_04684806.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291436194|ref|ZP_06575584.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291339089|gb|EFE66045.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 401

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 45/280 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  K  D  Y LSG K +L++  + + + +         EG      +   
Sbjct: 135 GSDVSAITSKAVKDGD-EYVLSGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED 311
           L +  P       GL      +K+G +   T EL        ++  L V      G V  
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRVPADRVLGGVTG 245

Query: 312 MKILIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +D      ++V+     +A+      + YA++RH  G  +     ++  +A++A
Sbjct: 246 RGFYHMMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRHTFGKPIAQHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ ++    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDSFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           + +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|196040454|ref|ZP_03107754.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196028586|gb|EDX67193.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 594

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 49/357 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLG 477
            YR+S  N I  G+     L V            L LL+K   L E+L   +  ++G
Sbjct: 394 MYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMMPGEVG 450


>gi|256060548|ref|ZP_05450716.1| Acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261324543|ref|ZP_05963740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261300523|gb|EEY04020.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 592

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +    +  V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDASVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|148558944|ref|YP_001258435.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148370201|gb|ABQ60180.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 592

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|125978166|ref|XP_001353116.1| GA19744 [Drosophila pseudoobscura pseudoobscura]
 gi|195173458|ref|XP_002027508.1| GL10298 [Drosophila persimilis]
 gi|54641867|gb|EAL30617.1| GA19744 [Drosophila pseudoobscura pseudoobscura]
 gi|194114409|gb|EDW36452.1| GL10298 [Drosophila persimilis]
          Length = 420

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 53/299 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ + E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 139 TPEQKEQYLPKLCNGEH-------------IGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            L+G K W  +   +D  I+ A+  G        +  F+V    E G       Q+L +K
Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVADKHGITAFIV----ETGWEGFSVAQKL-DK 239

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327
           +G R ++T EL F         DL V    +   E+  + + +          A   V  
Sbjct: 240 LGMRGSSTCELVFQ--------DLKVPAKNILGKENKGVYVLMSGLDFERLVLAAGPVGL 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D A +RS
Sbjct: 292 MQAACDVAFDYAHQRKQMSQLIGEFQLVQGKMADMYSTLSACRSYLYTVARSSD-AGNRS 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +     I+      +C + A  V  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 351 PKDCAGVIL------YCAEKATQVALDAIQILGGNGYINDNPTGRILRDAKLYEIGAGT 403


>gi|110637812|ref|YP_678019.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280493|gb|ABG58679.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 392

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G++ A + +  +   D  Y L+G K W  +SP +D  ++ A+ + GR+   +
Sbjct: 136 FGLTEPDHGSNPAGMVTSIKDAGDH-YILNGAKMWITNSPKADIAVVWAKDDAGRIKGII 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           V R +E     G     + NK   R++ T EL F N       +L   +  +GP++    
Sbjct: 195 VERGME-----GFTTPEIHNKWSLRASITGELVFDNVKVPKTHVLPKADGLSGPLK---- 245

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LDSA   ++   +  A      A +YA  R   G  +    + ++ +A++  +I  A
Sbjct: 246 --CLDSARYGIAWGALGAAMECYDIAKNYAMERVQFGKPIAGFQLTQKKLAEMLTEITKA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +RL    +E K+ + + + A       K     MA  V  EA + +GG G   E  
Sbjct: 304 QLLVWRLGMLKNEGKASTGQVSMA-------KRNNVDMALKVAREARQILGGMGITGEYP 356

Query: 430 IARH 433
           I RH
Sbjct: 357 IMRH 360


>gi|327481927|gb|AEA85237.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 387

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 22/308 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P       +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPKLIRGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  + +K  D  Y L+G K W  + P ++ +++ A+ +   G   +   + +
Sbjct: 134 NAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G       +K+G R + T EL F +        L V  G V   K+L+  LD   +
Sbjct: 193 RDWKGFSRGNKFDKLGMRGSNTCELFFDDVEVPEENVLGVENGGV---KVLMSGLDYERV 249

Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++G     M+  L   + Y   R   G  + +   ++  +AD+   + A+ A  + +A 
Sbjct: 250 VLAGGPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQ 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R  R++ 
Sbjct: 310 ACDRGETTRKDAAGVIL-------YTAENATQMALQAIQILGGNGYINEFPTGRLLRDAK 362

Query: 439 ANSILLGS 446
              I  G+
Sbjct: 363 LYEIGAGT 370


>gi|294629478|ref|ZP_06708038.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832811|gb|EFF91160.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 39/271 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTSAPTAEDR 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F +     D    G    R  +K+G R++ T EL F         D+ V   P ED+  
Sbjct: 184 RFGISLFAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PAEDLLG 232

Query: 313 ---KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAI 359
              K   YL   + S       G       A+ +A++ +V    +  +PV      K  +
Sbjct: 233 EENKGFYYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQERTVFGKPVAHFQNTKFEL 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI   ++  
Sbjct: 292 AACQAEVDAAEAVADRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQLH 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 345 GGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|163793494|ref|ZP_02187469.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181296|gb|EDP65811.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 386

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 22/245 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259
           LTE   G+D A+I +  +K  +G + L+G K F++ S  +    ++A+ +    G   + 
Sbjct: 124 LTEPEAGSDAASIRTSARKDGNG-WILNGTKRFITNSRRAGVLTVMARSDPDAPGSSGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             L D    G+ Y +   K+G +     ++ F +       ++G +    G    MK+L 
Sbjct: 183 AFLVDAKTPGISYGQPYRKMGQQGTHVADVIFEDARVPADAVIGGVE-GRGFKTAMKVL- 240

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             D   + +S + V +A     E++ YA  R   G  L D  +++  +AD   ++ AA +
Sbjct: 241 --DRGRIHLSAVCVGIAQRLIEESLRYATDRQQFGSRLADFQLVQAMLADSQTEMYAARS 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++   A  +        EAA         KY+  +M   V   A++  GG+GY+ + ++ 
Sbjct: 299 MTLDAATLYATEGKAPMEAA-------CCKYYASEMVGRVADRAVQIHGGAGYMADYAVE 351

Query: 432 RHYRE 436
           R YR+
Sbjct: 352 RFYRD 356


>gi|72162048|ref|YP_289705.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915780|gb|AAZ55682.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 385

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 26/258 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR-V 253
           GL+E+  G+D A++ ++  +  D  + L+G K W  ++ +S  + ++A  +     GR +
Sbjct: 127 GLSEREAGSDTASMRTRAVRDGDD-WILNGQKSWITNAGISKYYTVMAVTDPDGPRGRNI 185

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V   ++D    G  +   + K+G + + T EL F N    + GD  V         
Sbjct: 186 SAFVVH--IDD---PGFSFGEPERKLGIKGSPTRELIFDNVR--IPGDRLVGKVGEGLRT 238

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LD   +++    V +A+     A+ Y + R   G  + D   ++  +AD+A+ + A
Sbjct: 239 ALRTLDHTRVTIGAQAVGIAQGALDYALGYVKERKQFGKAIADFQGIQFMLADMAMKLEA 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +  A     AKS  ++A  +       K +   +A  +  +A++ +GG GY  + 
Sbjct: 299 ARQMVYVAA-----AKSERDDADLS-FYGAAAKCFASDVAMEITTDAVQLLGGYGYTRDY 352

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 353 PVERMMRDAKITQIYEGT 370


>gi|225175702|ref|ZP_03729695.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168626|gb|EEG77427.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 379

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 36/319 (11%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDI 211
           S  +T A+  ++ T P         +F  E       P+  +  A    GLTE   G+D 
Sbjct: 82  STGITYAAHCSIGTGPIY-------LFGTEEQKKKWVPLCASGKAFAAFGLTEPNAGSD- 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDG 265
           A  T     +    + L+G K F+++       ++  V  R      +  F+VP      
Sbjct: 134 AGGTQTTAVLEGDEWVLNGSKCFITNVGVGKVAVITAVTDRSKGTRGISSFIVPT----- 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMS 324
              G    +  +K+G +++ T E+   N     +   N+     E  K  L+ LD   +S
Sbjct: 189 DTPGFSVGQPYDKMGLKASDTREIILENV---RIPKENLLGNQDEGFKQFLVALDGGRIS 245

Query: 325 VSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  + V +A+A     + YA+ R   G  +     ++  +AD+ +    A  + ++ A  
Sbjct: 246 IGALSVGIAQACLDAALKYAKEREQFGQPISKFQAIQFKLADMKMKTELARLMVYKAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ +  S EAA  ++ A  T   C + A    +EA++  GG GY++E  + R+ R++  
Sbjct: 306 KDQGQPFSMEAAIGKLYASET---CMQNA----SEAVQIHGGYGYMKEYPVERYLRDAKL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     L +  LL
Sbjct: 359 MEIGEGTSEVQRLVIARLL 377


>gi|218893526|ref|YP_002442395.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218773754|emb|CAW29568.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 381

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 127 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 185 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 244 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 294 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 347 FMWEYPVARAWADARVQRIYAGTNEIM 373


>gi|254476275|ref|ZP_05089661.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214030518|gb|EEB71353.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 381

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++  K ++G Y L+G K F+S    SDA++ + +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
              +EDG+  GL +  L++K+G +S  T +++F +              GF    + +  
Sbjct: 183 --YVEDGTA-GLSFGGLEDKMGWKSQPTAQVQFDDCKIPADNLVGEEGSGFKYAMMGLDG 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G          L+ A  S+   + +L   + Y   R   G  +     ++  +AD+ +++
Sbjct: 240 G---------RLNIASCSLGAAQQALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     + A   D+    + +         + K +  +    ++ + ++  GG GY+ 
Sbjct: 291 QAARVFLRQAAWKLDQGTPDASK------HCAMAKKFVTEAGSKIVDQCLQLHGGYGYLA 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  I +  R+   + IL G+   M
Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368


>gi|254469328|ref|ZP_05082733.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211961163|gb|EEA96358.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 404

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 44/316 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++L  TP   + W            NK    +T  A    LTE   G+D+A I  +   I
Sbjct: 101 ISLFGTPEQQQQW-----------LNKTRAGQTLSA--FALTEPDSGSDVANI--ELSAI 145

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQR 274
            DG  Y L+G K W  +  ++  +++ A+     G      F+VP      +P     +R
Sbjct: 146 RDGDDYVLNGEKTWISNGGIAGLYVVFARTGEAPGAKGISAFIVPA----DTPGLTIEER 201

Query: 275 LK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L     + +       + +  +N  G       +S   ++  +  +       ++   R 
Sbjct: 202 LDVMAPHPLARLGFKQLRIPAANRIGGAGEGFKISMSVLDVFRCTV----GAAALGFARR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEE 389
           +L EA+  A  R +  G+L D  +++  +A++A+DI A+  L +R A + D   +R S E
Sbjct: 258 ALEEAVARATTRKLGDGVLADMQMVQGHLAEMAIDIDASALLIYRAAWTKDMGAARVSRE 317

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +    A  +I +A++  GG G     ++ + YRE  A  I  G+ + 
Sbjct: 318 AAMA-------KQFATDQAQQIIDKAVQIHGGEGVRSGNTVEKLYREIRALRIYEGASDV 370

Query: 450 MVLDVLNLL--EKGTN 463
             + V   L  ++G N
Sbjct: 371 QKIIVARQLLSQEGRN 386


>gi|328767161|gb|EGF77212.1| hypothetical protein BATDEDRAFT_17903 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 513

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 52/261 (19%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAF--- 243
            P+ +    I L +TE   G+D+AAI +   K  DG  Y ++G  KW  +   SD F   
Sbjct: 231 GPVLRGEKRICLSITEPGAGSDVAAIKTTAVKTPDGKFYIVNGTKKWITNGAQSDYFSTA 290

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLG 300
           +      G +   LV R   DG         L+ K       T++  +S++ G    ++ 
Sbjct: 291 VRTGDGPGGISMLLVER--ADG---------LETK-------TIKTSYSSSAGTSYVIME 332

Query: 301 DLNVSTGPVEDM--------KILIY--------LDSAIMSVSGMRVSLAEAIHYARRRHV 344
           +L V   PVE++        ++++Y        +  +I+  S  RV + E   ++ +R V
Sbjct: 333 NLKV---PVENLLGKEGDGFQVIMYNFNHERWVIACSILRSS--RVVVEECFKWSHQRMV 387

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KY 402
            G  LIDQPV++  +A +   IA   A    L N   +    S +    ++  PI   K 
Sbjct: 388 FGKRLIDQPVIRNKLAHM---IAEVEATQNWLENITYQMNKMSYKDQANKLAGPIALLKL 444

Query: 403 WCCKMAPAVIAEAMECIGGSG 423
            C ++A  +  +A +  GG G
Sbjct: 445 QCTRVAHNISDQACQIFGGRG 465


>gi|207723546|ref|YP_002253945.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206588747|emb|CAQ35710.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 622

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 71/320 (22%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGAKGISLFIVPKFLVNADGSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335
                     +   G+L+G+      P + +  + ++ +      GM  ++        A
Sbjct: 284 RPLGPDGQPRAGAIGYLVGE------PHKGLACMFFMMNEARIGVGMGATMLGYTGYLHA 337

Query: 336 IHYARRR------------HVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + YAR R              S  I ++D   ++R +      +  A  L+   A   DE
Sbjct: 338 LDYARNRPQGRPAGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397

Query: 383 AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  ++ A  AR      I+ PI K W  +      + A++  GG GY  E ++ + YR+
Sbjct: 398 ARGETDPAVRARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRD 457

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +  N I  G+     LD+L 
Sbjct: 458 NRLNPIHEGTHGIHGLDLLG 477


>gi|31791393|ref|NP_853886.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium bovis AF2122/97]
 gi|215425420|ref|ZP_03423339.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T92]
 gi|215433136|ref|ZP_03431055.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
 gi|260199217|ref|ZP_05766708.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T46]
 gi|260203360|ref|ZP_05770851.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis K85]
 gi|289441591|ref|ZP_06431335.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis
           T46]
 gi|289572795|ref|ZP_06453022.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85]
 gi|289748691|ref|ZP_06508069.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92]
 gi|289756280|ref|ZP_06515658.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
 gi|31616978|emb|CAD93085.1| PROBABLE ACYL-COA DEHYDROGENASE FADE3 [Mycobacterium bovis
           AF2122/97]
 gi|289414510|gb|EFD11750.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis
           T46]
 gi|289537226|gb|EFD41804.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85]
 gi|289689278|gb|EFD56707.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92]
 gi|289696867|gb|EFD64296.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
          Length = 388

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 40/286 (13%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            F N       +LG   +  G  + MK L    I + +  + V+    +L +++ YA++R
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVA--TAALEDSLAYAQQR 273

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A     
Sbjct: 274 ESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA----- 328

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              ++A  +   A+   GG GY  E  + R++R++P   ++LG G 
Sbjct: 329 --SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MILGEGT 370


>gi|83648760|ref|YP_437195.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636803|gb|ABC32770.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 395

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 20/239 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++ ++++DG Y L G K W  +SP++D  ++ A+++G +  F++
Sbjct: 138 FGLTEPDSGSDPGSMRTRAERVADG-YLLKGTKMWITNSPIADVMVVWAKLDGEIRGFIL 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + ++     GL   +++ K   R++ T E+   + F     +L + +   GP   +   
Sbjct: 197 EKGMK-----GLTAPKIEGKFSLRASITGEIVMDDVFVPEANMLPNASGLKGPFGCLNKA 251

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  ++        +A  Y   R   G  L    +++  +A++  +I+       +
Sbjct: 252 RY-GIAWGALGAAEFCWTQARQYCLDRKQFGRPLAANQLVQLKLANMQTEISIGLQGCLQ 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMECIGGSGYIEERSIARH 433
                DE +   E      +++ I +  C K +  A IA  M   GG+G  +E  + RH
Sbjct: 311 AGRLMDEGRCAPE------LISLIKRNSCGKALDIARIARDMH--GGNGIADEFHVIRH 361


>gi|23501316|ref|NP_697443.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161618387|ref|YP_001592274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|254703765|ref|ZP_05165593.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|260566981|ref|ZP_05837451.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261754412|ref|ZP_05998121.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|23347206|gb|AAN29358.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161335198|gb|ABX61503.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|260156499|gb|EEW91579.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261744165|gb|EEY32091.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 592

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|134298279|ref|YP_001111775.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           reducens MI-1]
 gi|134050979|gb|ABO48950.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 380

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 25/268 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +  +     LTE + G+D AA+     +  D  Y L+G K F+++   +D ++   +
Sbjct: 113 PLCEGKMLGAFALTEPQAGSDAAALKCTAVRKGDK-YILNGSKIFITNGGYADMYVTFVR 171

Query: 249 VEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +     +  V  L+ D    GL   + + K+G   +ATV L F +       ++ V   
Sbjct: 172 TDPSTKNYNGVTCLIVDKDTPGLVIGKPEEKMGLNGSATVTLTFEDA------EVPVENR 225

Query: 308 PVEDMK----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
            +E+ K     +  L+   +++    + +A+      I Y + R   G  L  Q  ++  
Sbjct: 226 LLEEGKGFNVAMGLLNGGRITIGAQGLGIAQGALDLTIPYVKGREQFGKPLSAQQGIQFM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A +I A+  L +R A      KS   E A    MA   K +    A  V  + ++ 
Sbjct: 286 LADMATEIDASRLLIYRAA----WLKSNGLEHAMEASMA---KRFATDTAMRVTTDCVQL 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG GY +E  I R+ R++    I  G+
Sbjct: 339 FGGYGYCKEYQIERYMRDAKITQIYEGA 366


>gi|171684241|ref|XP_001907062.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942081|emb|CAP67733.1| unnamed protein product [Podospora anserina S mat+]
          Length = 435

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 20/254 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------- 249
           +  G+TE   G D   ++++  K SDG Y ++G K W   + ++   I+LA+        
Sbjct: 158 VCFGVTEPNAGLDTLRLSTRATKQSDGSYKVTGQKIWITCAQVASKMILLARTTPLEEVK 217

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G  L    L+  SP GL  +R+K K+G R+    E+ F N   + +G  ++     
Sbjct: 218 KPSEGLSLFCIDLDRSSP-GLELRRIK-KMGGRAVDANEVFFDN---YSVGVDSLIGEEG 272

Query: 310 EDMKILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  KI+++ +++    ++G  +     +L +A  YAR R+V    +     +   +A++ 
Sbjct: 273 QGFKIILHGMNAERCLLAGEALGLGYAALGKAATYARERNVFKRPIGQNQGIAHPLAEVY 332

Query: 364 LDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           + + AA   ++  A  +D +K+ ++       +     KY   + A +    A+   GG 
Sbjct: 333 MKLEAAKLATYHAAQLYDSSKADKTIRQDAVGVACNSAKYLAAEAAFSACERAVLTHGGM 392

Query: 423 GYIEERSIARHYRE 436
           GY  E  + R++RE
Sbjct: 393 GYAVEYDVERYFRE 406


>gi|50084877|ref|YP_046387.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|19068131|gb|AAL54851.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530853|emb|CAG68565.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
          Length = 379

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 53/315 (16%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L+SP + +      M +    K W PK+ S E             V   + +TE   G+D
Sbjct: 92  LVSPYIQN------MGSEAQKKYWLPKMVSGE-------------VVTAIAMTEANAGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + AI +Q   + +  Y + G K F+S+ + +D  +++A+ + +     +   L D    G
Sbjct: 133 LQAIRTQA-ILKNEHYVIDGSKTFISNGLHADLIVLVAKTDPQARAKGISLFLVDAQLEG 191

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKIL 315
           +   R   KIG  +  T EL F                 F +L+ +L     P E + I 
Sbjct: 192 VEKGRSLKKIGLHAQDTAELFFDGVHVPVTQRLGQEGQGFAYLMQEL-----PRERLSI- 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A+M +  +  ++     Y R R   G  L      +  IA+  +   AA A    
Sbjct: 246 -----AMMGMGSIWGAIDLTTSYVRERKAFGQTLAQLQNTRFVIANAQIKAKAAQAFIHE 300

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  + +        A  +    IT   C      VI + ++  GG GY++E  I+R + 
Sbjct: 301 CAQMYHQGALTVGHVAALKCF--ITDTQC-----DVIDQLLQLFGGYGYMQEYPISRFFV 353

Query: 436 ESPANSILLGSGNAM 450
           +S    I  G+   M
Sbjct: 354 DSRVQKIYGGTNEIM 368


>gi|42522736|ref|NP_968116.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39573932|emb|CAE79109.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 428

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 18/249 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS------DAFIMLAQVEGR 252
           + ++E   GTD+  + +   K  D  Y ++G K W  +  +       D  ++ A+   +
Sbjct: 157 MAMSEPAIGTDVLGMQTTAVKKGDE-YIINGRKMWITNGTIDENNTPCDLVLVYARTGEK 215

Query: 253 VGCFLVPRLLEDGSPNGLCY-QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
            G  L+   L +    G    Q++K+K+G R + T EL F +       L+G    S   
Sbjct: 216 HGRALISTFLVEKDHKGFAVGQKIKDKLGMRGSNTAELVFQDCHVPASALIGHEGDSMLH 275

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +     +  L  A MS+   R S+     YA  R   G  L     M+R IAD   +  A
Sbjct: 276 MMRNLEIERLTLAAMSLGIARRSIEIMNRYATEREAFGKSLNHFGQMQRYIADSYAEYKA 335

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A  +  A   D  K  +      R+ +   K     MA  V   A++ +GG GY+ E 
Sbjct: 336 ARAYVYETARRMDLNKEGN------RLDSDGVKLVATTMAKNVADRAIQVLGGYGYVGEY 389

Query: 429 SIARHYRES 437
            + R +R++
Sbjct: 390 VVERLWRDA 398


>gi|90425769|ref|YP_534139.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107783|gb|ABD89820.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 404

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 29/245 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K+SDG Y L+G K W  ++P++D F++ A+      ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTRAEKVSDG-YRLTGTKMWISNAPIADVFVVWAKSPEHNNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVS--TGPV 309
           F    +LE G   GL   ++  K+  R++ T E+      G ++G+     NV+   GP 
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMD---GVVVGEEALLPNVAGLKGPF 256

Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             +    Y +   +M  +     +A A  Y   R      L    ++++ +AD+  +IA 
Sbjct: 257 GCLNRARYGISWGVMGAA--EDCMARARQYTLDRKQFNRPLAATQLVQKKLADMQTEIAL 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E 
Sbjct: 315 GLQGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIEY 367

Query: 429 SIARH 433
            + RH
Sbjct: 368 HVMRH 372


>gi|254701219|ref|ZP_05163047.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261751758|ref|ZP_05995467.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261741511|gb|EEY29437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 592

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|221369193|ref|YP_002520289.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
 gi|221162245|gb|ACM03216.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 377

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 34/311 (10%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+ T   VH      I  R   P  +     P  + +      LTE   G+D +A+ S+ 
Sbjct: 81  AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRA 140

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
           ++ + G Y + G K F++S  ++   I+ A++EG  G     CFL P      +P G   
Sbjct: 141 RR-AGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGITCFLTP----TDTP-GYEV 194

Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            ++++K+G  ++ T  L F +         G       ++   +E  +I I    A  SV
Sbjct: 195 VKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETGRIGI----AAQSV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YAR R   G  LI+   +   +A+    + AA  +    A   D  + 
Sbjct: 251 GMAQAALEAAVAYARERTSFGRSLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQP 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA A++ A        + A  ++++A++  GG GY  +  + R YR+     I  G
Sbjct: 311 CLTEAAMAKLFA-------SEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEG 363

Query: 446 SGNAMVLDVLN 456
           + +   + +L 
Sbjct: 364 TSDIQKMLILR 374


>gi|163842694|ref|YP_001627098.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis
           ATCC 23445]
 gi|163673417|gb|ABY37528.1| acyl-CoA dehydrogenase domain protein [Brucella suis ATCC 23445]
          Length = 592

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|62289399|ref|YP_221192.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82699326|ref|YP_413900.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189023650|ref|YP_001934418.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237814885|ref|ZP_04593883.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|254688712|ref|ZP_05151966.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254693195|ref|ZP_05155023.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254696840|ref|ZP_05158668.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254709562|ref|ZP_05171373.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254713021|ref|ZP_05174832.1| Acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254716624|ref|ZP_05178435.1| Acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|254729745|ref|ZP_05188323.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256031054|ref|ZP_05444668.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256256959|ref|ZP_05462495.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|256368868|ref|YP_003106374.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260168185|ref|ZP_05754996.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|260545849|ref|ZP_05821590.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260754190|ref|ZP_05866538.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260757410|ref|ZP_05869758.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260761235|ref|ZP_05873578.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883215|ref|ZP_05894829.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261213437|ref|ZP_05927718.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261218425|ref|ZP_05932706.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261317090|ref|ZP_05956287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320726|ref|ZP_05959923.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261757645|ref|ZP_06001354.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265988126|ref|ZP_06100683.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|297247812|ref|ZP_06931530.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62195531|gb|AAX73831.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615427|emb|CAJ10396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           domain [Brucella melitensis biovar Abortus 2308]
 gi|189019222|gb|ACD71944.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237789722|gb|EEP63932.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|255999026|gb|ACU47425.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260097256|gb|EEW81131.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260667728|gb|EEX54668.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260671667|gb|EEX58488.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674298|gb|EEX61119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260872743|gb|EEX79812.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260915044|gb|EEX81905.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260923514|gb|EEX90082.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261293416|gb|EEX96912.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261296313|gb|EEX99809.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261737629|gb|EEY25625.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|264660323|gb|EEZ30584.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|297174981|gb|EFH34328.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 592

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|56418732|ref|YP_146050.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56378574|dbj|BAD74482.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 386

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 123/265 (46%), Gaps = 19/265 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++ AAI +   +  D  Y ++G K ++++ + +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAAIKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +   G   +   + +    G    +++ K+G R + + EL F N     +   NV   
Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLRGSHSAELFFDN---LEVPAENVLGR 227

Query: 305 -STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361
              G V  +KIL    + + + + G  + L E  + YA +R   G  +I+Q  ++  +A+
Sbjct: 228 EGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +++ I    +  +R+A   D+     +EAA       I K +  ++   +   A++  GG
Sbjct: 288 MSMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY+++  I R++R++    I  G+
Sbjct: 341 LGYMKDYPIERYFRDARITKIYEGT 365


>gi|313108038|ref|ZP_07794204.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310880706|gb|EFQ39300.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 406

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 14/264 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 143 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 201

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++      G+      +K+G RS+ T ++ F N        +  + G    M++L + 
Sbjct: 202 SLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 260

Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  +      + G+   +   I Y + R   G  LID  V+   +A++  ++ A  AL +
Sbjct: 261 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 320

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  ++R Y
Sbjct: 321 QATELYVKGRDVTRLASMAKLKA-------GRLGREVSDACLQYWGGMGFMWDNPVSRAY 373

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++   SI  G+   M+  +  L+
Sbjct: 374 RDTRLVSIGGGADEIMLGIICKLM 397


>gi|256159118|ref|ZP_05456939.1| Acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256254457|ref|ZP_05459993.1| Acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261221629|ref|ZP_05935910.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265997591|ref|ZP_06110148.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260920213|gb|EEX86866.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262552059|gb|EEZ08049.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 592

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338

Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395
                +I+ P ++R      A+  +A  I  A A +  +++  D A ++  S+ A    +
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|239931119|ref|ZP_04688072.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439488|ref|ZP_06578878.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342383|gb|EFE69339.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 386

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 50/316 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
           L  T    + W P++ S E             V    GLTE  GG+D  A  +  +   +
Sbjct: 100 LFGTEEQKRAWLPRLCSGE-------------VLGAFGLTEPDGGSDAGATRTTARLDEA 146

Query: 223 DGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQ 273
              + ++G K F+++  +D    + +  V GR       +   +VP     G+P G    
Sbjct: 147 TNEWVINGTKCFITNSGTDITGLVTVTAVTGRGPGGKPLISAIIVP----SGTP-GFTVA 201

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +K+G  ++ T EL F +       LLG+           + L  LD   ++++ +  
Sbjct: 202 APYSKVGWNASDTRELSFQDVRVPASNLLGEEGRGY-----AQFLRILDEGRIAIAALAT 256

Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            LA     E++ YA+ RH  G  +     ++  IAD  +++ A TA   RLA  + +A S
Sbjct: 257 GLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDAAS 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R       +  A + K +   +A     +A +  GG G++ E  +AR +R+S    + +G
Sbjct: 310 RLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIG 367

Query: 446 SGNAMVLDVLNLLEKG 461
            G + V  +L   E G
Sbjct: 368 EGTSEVQRMLIARELG 383


>gi|229591811|ref|YP_002873930.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363677|emb|CAY51038.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 385

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 18/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+D+A + +  +K  D  Y ++G K W  +SP +D   +LA           
Sbjct: 123 IGVSETGAGSDVAGLKTHARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHINK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316
             ++   +  G+       K+G  S+ T ++ F    G  +   N     G    M++L 
Sbjct: 182 SLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFD---GVRVPQRNRIGHEGAGFMMQMLQ 238

Query: 317 YLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + +  +      + G+   +   I Y + R   G  LID  V+   +A+++ +I    AL
Sbjct: 239 FQEERLFGAANMIKGLEHCIDTTIEYCKERQTFGKALIDNQVIHFRLAELSTEIECLRAL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  +AR
Sbjct: 299 VYQATEQYIKGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVAR 351

Query: 433 HYRESPANSILLGSGNAMV 451
            YR+    SI  G+   M+
Sbjct: 352 AYRDVRLVSIGGGADEIML 370


>gi|284989715|ref|YP_003408269.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284062960|gb|ADB73898.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 399

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 32/262 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RVGCFLV- 258
           G+D+A I ++  + +DG Y + G K +L++  S   +  ++   EG       +  FLV 
Sbjct: 135 GSDVAGIRTRAVRQADGDYVIDGQKMWLTNGGSSTLVAALVRTDEGAEKAHQNLTTFLVE 194

Query: 259 -PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG-DLNVSTGPV 309
            P    +  P G+      +K+G +   T EL F       S+  G + G         V
Sbjct: 195 KPAGFGEVVP-GITIPGKIDKMGYKGVDTTELVFDGYRAEASDVLGGVPGRGFAQMMDGV 253

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  ++ +   +  +S+    +++A    YA++R   G  +     +   +A++A  + AA
Sbjct: 254 EVGRVNVAARACGISIRAFELAIA----YAQQRETFGKPIAQHQAIAFQLAEMATKVEAA 309

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+  + A   D  K    EA  A+++A     +C +    V  ++    GG GY +E  
Sbjct: 310 HAMMVKAARLKDAGKRNDVEAGMAKLLA---SEYCAE----VTTQSFRIHGGYGYSKEYE 362

Query: 430 IARHYRESPANSILLGSGNAMV 451
           I R  RE+P   +L+G G + +
Sbjct: 363 IERLMREAP--FLLIGEGTSEI 382


>gi|172064132|ref|YP_001811783.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171996649|gb|ACB67567.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 393

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGDH-YVLNGTKMWITNGPDCDTLVVYAKTDLDAGSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|260185079|ref|ZP_05762553.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
 gi|289445747|ref|ZP_06435491.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
 gi|289418705|gb|EFD15906.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
          Length = 388

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 36/284 (12%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       +LG   +  G  + MK L    +  A  ++     +L +++ YA++R  
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRES 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A       
Sbjct: 276 FGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA------- 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            ++A  +   A+   GG GY  E  + R++R++P   ++LG G 
Sbjct: 329 SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MILGEGT 370


>gi|110642145|ref|YP_669875.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|157145131|ref|YP_001452451.1| hypothetical protein CKO_00864 [Citrobacter koseri ATCC BAA-895]
 gi|191169992|ref|ZP_03031546.1| acyl CoA dehydrogenase [Escherichia coli F11]
 gi|227885554|ref|ZP_04003359.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|237704393|ref|ZP_04534874.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300985341|ref|ZP_07177407.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|300992175|ref|ZP_07179814.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|301051385|ref|ZP_07198199.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|306814907|ref|ZP_07449069.1| hypothetical protein ECNC101_22737 [Escherichia coli NC101]
 gi|110343737|gb|ABG69974.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|112292714|emb|CAJ76294.1| putative acyl-CoA dehydrogenase [Escherichia coli]
 gi|157082336|gb|ABV12014.1| hypothetical protein CKO_00864 [Citrobacter koseri ATCC BAA-895]
 gi|190909508|gb|EDV69093.1| acyl CoA dehydrogenase [Escherichia coli F11]
 gi|226900759|gb|EEH87018.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227837494|gb|EEJ47960.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|294492609|gb|ADE91365.1| acyl CoA dehydrogenase [Escherichia coli IHE3034]
 gi|300296979|gb|EFJ53364.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|300306550|gb|EFJ61070.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|300406844|gb|EFJ90382.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|305852301|gb|EFM52753.1| hypothetical protein ECNC101_22737 [Escherichia coli NC101]
 gi|307554020|gb|ADN46795.1| putative acyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|307626515|gb|ADN70819.1| hypothetical protein UM146_07120 [Escherichia coli UM146]
 gi|315286917|gb|EFU46334.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 110-3]
 gi|315290157|gb|EFU49538.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 153-1]
 gi|323956258|gb|EGB52004.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
          Length = 376

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 24/266 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   IG + LTE   G+D+  + ++ Q+  DG       KW     ++D FI+L  
Sbjct: 108 PKLATGELIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGKKKWITLGQIADFFIVLIH 167

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              ++   L+ R     + +G     L + +G R N   EL F++       LLG L   
Sbjct: 168 CGNQLATVLIDR-----NTDGFTITPLNDMLGLRGNMLAELHFNDCRLKEDALLGPLT-- 220

Query: 306 TGPVEDMKILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             P   + +   L+     +A  S+   R ++  A  Y R+R      L    +++   A
Sbjct: 221 --PGVPLAVNFALNEGRFTTACGSLGLCRAAVDVAARYIRQRKQFKRRLFSHGIVQHLFA 278

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +     +A  + F  A    E +     A   +I+  + KY   K A  V  +A++ +G
Sbjct: 279 TMLTQTRSAQLMCFSAA----EYRETLHPAMINQIL--MAKYVASKAAVDVAGKAVQLLG 332

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +G   + ++ R+YR++    I+ G+
Sbjct: 333 ANGCHADYAVERYYRDAKIMEIIEGT 358


>gi|307198078|gb|EFN79131.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 637

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 87/424 (20%), Positives = 168/424 (39%), Gaps = 76/424 (17%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ + EY                  LTE   G+D ++I  +  K 
Sbjct: 173 ILLFGTPEQKAKYLPRVCNGEY--------------AAFCLTEPSSGSDASSIRCRAVKA 218

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQV          + ++  F+V R        G
Sbjct: 219 ADGSHYILNGSKIWISNGGIANIMTVFAQVPTKDPNTGEMKNKMTAFIVERGF-----GG 273

Query: 270 LCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +     + K+G R + T E+ F        N  G       V+   + + +  +   +A 
Sbjct: 274 VTSGPPEKKMGIRCSNTAEIFFEDVKIPAENVLGKEGQGFKVAMNILNNGRFGM---AAA 330

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S   MR  ++ A+ +A +R   G  L +   ++  IA +A+      +L++ ++ + D 
Sbjct: 331 LS-GNMRYCISRAVSHATQRVQFGRTLDNYGTIQEKIARMAMLHYITESLAYMISGNMDR 389

Query: 383 AKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EAA ++  +  + +W C        EA++ +GG GY+ +  + R  R+     
Sbjct: 390 GSQDYHLEAAISKCFSSESAWWVCD-------EAIQTLGGMGYMRDAGLERVLRDLRIFR 442

Query: 442 ILLGSGNAMVLDV--LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           I  G+ + + L +    +   G++L E     L++   + G  V  +  ++        G
Sbjct: 443 IFEGANDILRLFIALTGIQYAGSHLKE-----LQKAFKNPGANVGLLFGEATKRATRAIG 497

Query: 500 LAR----------FLTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHS 540
           L+            L E  AL S +         A+L + G   + + F+ NR       
Sbjct: 498 LSSPPTFTHLVHPKLAESAALCSKSVESFGNTIEASLIKYGRGIVEEQFILNRLTQAAFD 557

Query: 541 THCM 544
           T+ M
Sbjct: 558 TYTM 561


>gi|255535480|ref|YP_003095851.1| Glutaryl-CoA dehydrogenase [Flavobacteriaceae bacterium 3519-10]
 gi|255341676|gb|ACU07789.1| Glutaryl-CoA dehydrogenase [Flavobacteriaceae bacterium 3519-10]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 24/263 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  A+ +  +   D  Y L+G K W  +
Sbjct: 115 FGSEEQKRKYLPKLATGEMIGAFGLTEPNHGSDPGAMETHFEDKGDH-YLLNGAKMWITN 173

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +P+ D  ++ A+ E G+V   +V R  E     G       NK   R++ T EL F++  
Sbjct: 174 APLCDIAVVWAKNEQGKVQGMIVERGFE-----GFTTPETHNKWSLRASKTGELVFNDV- 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
              +   N+    +     L  L+SA   +S   +  A      A+ Y++ R   G  + 
Sbjct: 228 --KIPKENILPNVIGLKGPLSCLNSARYGISWGVIGAAIDCYCTALQYSKERKQFGKPIA 285

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++ +A+   +I  +  L  +L N  ++ K+   + + A       K    KMA  
Sbjct: 286 SFQLQQKKLAEFLTEITKSQLLCLQLGNLKNDHKASPAQISMA-------KRNNVKMAIE 338

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +  E+ + +GG G + E  + RH
Sbjct: 339 IARESRQMLGGMGIMGEFPMMRH 361


>gi|115360877|ref|YP_778014.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115286205|gb|ABI91680.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 615

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 126/315 (40%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   IY + G K ++S+ M +      +
Sbjct: 147 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAVDGEKVYISAGMHELTENTLY 206

Query: 244 IMLAQVEG------RVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEF- 291
            +L +++        + C +VPR   D       PN +    L  K+G +  A   L F 
Sbjct: 207 FVLGRIDSASPDSFSLSCLVVPRFWPDEETGELQPNHVDCIGLPRKMGLKGCANTHLVFG 266

Query: 292 --SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
               T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 267 ANGTTRGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYASRRL 321

Query: 344 VSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
               I            +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 322 QGRPIERASNTNAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 381

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 382 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 441

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 442 SIWEGTNYIQAQDLV 456


>gi|311696827|gb|ADP99700.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 389

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 26/242 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D + + ++ +K+ DG Y LSG K W  +SP++D  ++ A+++G+V  F++
Sbjct: 134 FGLTEPNHGSDPSGMETRAKKV-DGGYLLSGSKTWITNSPIADVCVVWAKLDGKVNGFVI 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R   +G+  GL   +++ K   R++ T  +     F      L V    GP        
Sbjct: 193 ER---EGA-TGLETPKIQGKFSLRASETGSIFMDEVFVPDENHLEVEGLKGPFS------ 242

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   +S   +  AE     A +Y   R   G  L    ++++ + D+  +I     
Sbjct: 243 CLNKARFGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTEITIGLQ 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +L    D      +  +       + K   C  A  +   A +  GG+G  +E  + 
Sbjct: 303 AVLQLGRMMDAGTVTPDAIS-------LLKRNNCGKALDIARVARDMHGGNGIADEYHVI 355

Query: 432 RH 433
           RH
Sbjct: 356 RH 357


>gi|316932524|ref|YP_004107506.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600238|gb|ADU42773.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 381

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 15/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ +   K+    Y ++G K F+++  + D  I++A+  G     L 
Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLDGDDYVINGQKTFITNGQNCDLIIVVARTGGAGAKGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE     G    R  +KIG  ++ T EL F N       LLG      G V+ M+ L
Sbjct: 185 LIVLETKDNPGFKRGRNLDKIGLHASDTSELFFENARTPKANLLGG-EEGKGFVQLMQQL 243

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  AI +V+ M  ++A    Y + R   G     QPV++    + A  +A     +
Sbjct: 244 PQERLIIAIGAVAAMERAVALTSEYTKDRKAFG-----QPVIE--FQNTAFTLAERKTEA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F      D    +        + A + K+W  +     + E ++  GG GY++E  I R 
Sbjct: 297 FIARVFVDFCLVQLIAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPIGRM 356

Query: 434 YRESPANSILLGSGNAMVL 452
           + +S    I  G+   M L
Sbjct: 357 FIDSRIQKIYGGTNEVMKL 375


>gi|169796085|ref|YP_001713878.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213157182|ref|YP_002319227.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483540|ref|YP_002325759.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|301345296|ref|ZP_07226037.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301512938|ref|ZP_07238175.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301594633|ref|ZP_07239641.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|169149012|emb|CAM86889.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056342|gb|ACJ41244.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987427|gb|ACJ57726.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
          Length = 430

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  AR++       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKLFHREAYLARLL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|154251533|ref|YP_001412357.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155483|gb|ABS62700.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 383

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 46/302 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W PKI S E             V +   LTE   G+D A++ +    I DG  Y ++G K
Sbjct: 109 WLPKIASGE-------------VIVSFALTEPEAGSDAASLKATA--IRDGDHYIVNGTK 153

Query: 233 WFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++++   + AF +LA+ + +      V  F+VPR +      G+   + + K+G +   
Sbjct: 154 RYITNANKAHAFTLLARTDPKTPGAKGVSAFIVPRDIP-----GIHVGKPEKKMGQQGAH 208

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHY 338
             ++ F +       LLGD     G V  M++L    +++ +  + V+   V   +++ Y
Sbjct: 209 ICDVIFEDARIPADCLLGDTE-GRGFVTAMQVLERGRLHISAVCIGVADRLVE--DSVKY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD  ++  A   +    A   D  +  + E++       
Sbjct: 266 AAERKQFGAPIGNLQLVQAMLADSKMEAYAGRCMVLDAARRRDAGEDVATESS------- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDVLNL 457
             K +C +    +   A++  GG+GY+ +  I R YR+     I  G+     V+   NL
Sbjct: 319 CCKLFCSEAVGRIADRAVQVHGGAGYVADYGIERFYRDVRIFRIYEGTSQVQQVIIARNL 378

Query: 458 LE 459
           L+
Sbjct: 379 LK 380


>gi|58387602|ref|XP_315683.2| AGAP005662-PA [Anopheles gambiae str. PEST]
 gi|55238468|gb|EAA11811.3| AGAP005662-PA [Anopheles gambiae str. PEST]
          Length = 419

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+  + ++ +K  D  Y L+G K W  +  +++ + +LA+      C     
Sbjct: 156 VTEPGAGSDVNGVRTRAEKKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLVGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ Y+  R   G  +     +   +AD+A+ +  A 
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCLDEALKYSLERKAFGVPIAAHQAVSFMLADMAIGVETAR 330

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+ +  S         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 331 LITMKSAWEVDQGRRNS-------YYASIAKCYASDIANKIATDAVQVFGGNGFNSEYPV 383

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 384 EKLMRDAKIYQIYEGT 399


>gi|94732791|emb|CAK04853.1| novel protein containing an Acyl-CoA dehydrogenase, N-terminal and
           C-terminal domain [Danio rerio]
          Length = 445

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 52/286 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P     V + LG++E   G+D+A+I ++  +  D      G  W  +   +D   +LA  
Sbjct: 175 PTIMGDVVVCLGVSETGAGSDVASIKTKAVRKGDEYVINGGKMWTTNGTQADWMCLLANT 234

Query: 250 EGRVGCFLVPRLLEDGSPN-------------GLCYQRLKNKIGNRSNATVELEF----- 291
                         DG P+             G+   R  NKIG  S+ T E+ F     
Sbjct: 235 -------------SDGPPHKNKSLICLPMKLPGVHIARKINKIGMHSSDTAEVFFDDVRV 281

Query: 292 --SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG----MRVSLAEAIHYARRRHVS 345
             SN  G          G     ++L + +  +  V+     M   + E I Y R+R + 
Sbjct: 282 PCSNVIG--------QEGMGFTYQMLQFQEERLWGVANILTVMEKVVQETIQYTRQRKIF 333

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++   V+   +A++ ++I    +L  R    + +    ++ A+ A++ A        
Sbjct: 334 NQPILHNQVVHFRLAELQMEIELLRSLLHRATALYIKGNDVTKLASMAKLKAG------- 386

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++A  +    ++  GG GY  +  ++R YR+S   SI  G+   M+
Sbjct: 387 RLARELADSCLQYWGGMGYTSDVLVSRFYRDSRLMSIGAGADEVML 432


>gi|262200469|ref|YP_003271677.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262083816|gb|ACY19784.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 18/268 (6%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           M      + + +TE   G+D+A I +  +   D  Y ++G K F+S+ + SD  +++ + 
Sbjct: 115 MASGETILAVAMTEPGAGSDLAGIKTSAKDDGDH-YIVNGSKTFISAGINSDLVVVVCRT 173

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G      L+ +    G    R  +K+G +S  T EL F+N       LLG+ N 
Sbjct: 174 NPDPAAGHKAFSLLVVERGMEGFERGRKLDKMGLKSADTAELHFNNVRVPKANLLGEEN- 232

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    M+ L    L  AI +++G R    E + Y + R   G  +      +  +A+I
Sbjct: 233 -KGFYHLMQNLPSERLSIAIGAIAGARAIFDETLQYTKDRKAFGKPIGTFQHNRFVLAEI 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++  A     R      + +  + +A+ A       K+WC ++   VI   ++  GG 
Sbjct: 292 ATELDLAEVYIDRCLQGVLDDELTAVDASKA-------KWWCTELGKRVIDSCVQLHGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  +AR Y++S   +I  G+   M
Sbjct: 345 GYMNEYRVARAYKDSRIQTIFGGTTEIM 372


>gi|226308679|ref|YP_002768639.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187796|dbj|BAH35900.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 51/277 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251
           + +TE   G+D+A I +  +   DG  Y ++G K F++   ++D  +++ +         
Sbjct: 124 IAMTEPGTGSDLANIATTAKLSEDGTHYVVNGSKTFITGGVLADRVLVVCRTAPSTAENR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  +   L+ D S  G    R  NKIG +++ T EL F         D+ V   PVED
Sbjct: 184 RTGLSI---LVVDTSSPGYSVGRKINKIGLKTSDTAELSFV--------DVQV---PVED 229

Query: 312 M------------------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                              ++ I   +A  + + +R     AI Y + R V G  +    
Sbjct: 230 RLGEEGDGFSYLTHNLAQERLTIAFGAAATASAALRF----AIDYVKDRKVFGKPVAAFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             K  +A+ A ++ A   +S       D       +AA A++       +C + A  VI 
Sbjct: 286 NTKFVLAECATEVDAIQLVSDNALECHDRGTLTIADAAKAKL-------FCTEAAGRVID 338

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + ++  GG GYI E  IAR Y ++    I  G+   M
Sbjct: 339 KCLQLHGGYGYITEYPIARLYADTRVTRIYGGTSEVM 375


>gi|75763606|ref|ZP_00743303.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74488910|gb|EAO52429.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 144

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 7/130 (5%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E     +E+
Sbjct: 22  ALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKES 81

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A +++ A  T       A  V  EA++  GG GY ++  + R+ R++    I  G+    
Sbjct: 82  AMSKVFAGDT-------AMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQ 134

Query: 451 VLDVLNLLEK 460
            L +  +L K
Sbjct: 135 RLVISRMLTK 144


>gi|307202129|gb|EFN81629.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 389

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 32/273 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  A+ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   + 
Sbjct: 132 LTEPGSGSDAFALKTVAKK--DGSDYVINGTKMWISNSDIAGIFLVFANADTNAGYRGIT 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
               +    G+   + ++K+G +++ T  + F       SN  G        + G     
Sbjct: 190 TFFVERDTPGMTVAKPEDKLGIKASGTCMVHFDNVRVPESNILGQFGHGYKYAAG----- 244

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               +L+   + +    + +A+      I Y   R   G  +     M+  IA    D+ 
Sbjct: 245 ----FLNEGRVGIGAQMIGIAQGCLDATIPYTLERKQFGKDIFSFQSMQHQIAQAVTDVE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L +  A   D  K   +EAA A+++A  T       A  V A+ ++ +GG G+  +
Sbjct: 301 CARLLVYNAARLVDAKKDVMKEAAMAKLIASET-------ALRVTAKCIDFMGGVGFTTD 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + +R++   +I  G+ N  +  +   + K
Sbjct: 354 FPQEKFFRDAKIGTIYEGTSNMQLSTIAKCIRK 386


>gi|194865401|ref|XP_001971411.1| GG14445 [Drosophila erecta]
 gi|190653194|gb|EDV50437.1| GG14445 [Drosophila erecta]
          Length = 419

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 25/258 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D++ I ++ +K  D  Y ++G K W  +  +++ + +LA+      C    
Sbjct: 155 GVTEPGAGSDVSGIKTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTNPDPKCPPSK 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI 
Sbjct: 214 AFTGFIVERDTP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIA 269

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +  +
Sbjct: 270 MGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETS 329

Query: 370 TALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  E 
Sbjct: 330 R-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSEY 381

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 382 PVEKLMRDAKIYQIYEGT 399


>gi|167644385|ref|YP_001682048.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346815|gb|ABZ69550.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 31/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVE------G 251
             LTE   G+D AA+ ++   + DG  Y L+G K F++ +  +  F ++A+ +       
Sbjct: 122 FALTEAEAGSDSAAVRTRA--VRDGEDYVLNGAKRFITNASRASVFTVMARTDPNRAGAS 179

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FLVPR        GL     + K+G +     ++ F +    +   L +     E 
Sbjct: 180 GVSAFLVPR-----QTPGLSIGPPEKKMGQQGAHIHDVVFEDVR--VPASLRLGA-EGEG 231

Query: 312 MKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K+ +  LD   + ++ + V +AE     ++ YA  R   G  + +  +++  IAD   +
Sbjct: 232 FKLAMRVLDRGRLHIAAVCVGVAERLIADSVAYALERKQFGRPIAEFQMIQAMIADSKTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA AL F  A   D     + EAA        TK +  +M   V   A++  GG+GY+
Sbjct: 292 ALAARALLFESARQRDAGDDVTLEAAA-------TKLFASEMVGRVADRAVQIFGGAGYV 344

Query: 426 EERSIARHYRESPANSILLGS 446
            +  I R YR+     I  GS
Sbjct: 345 ADYGIERFYRDVRIFRIYEGS 365


>gi|254974424|ref|ZP_05270896.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-66c26]
 gi|255091816|ref|ZP_05321294.1| putative acyl-CoA dehydrogenase [Clostridium difficile CIP 107932]
 gi|255313551|ref|ZP_05355134.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-76w55]
 gi|255516235|ref|ZP_05383911.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-97b34]
 gi|255649333|ref|ZP_05396235.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-37x79]
 gi|260682503|ref|YP_003213788.1| putative acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260686102|ref|YP_003217235.1| putative acyl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519425|ref|ZP_07405772.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-32g58]
 gi|260208666|emb|CBA61438.1| putative acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260212118|emb|CBE02742.1| putative acyl-CoA dehydrogenase [Clostridium difficile R20291]
          Length = 380

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 33/294 (11%)

Query: 170 VHKDWAPKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-GI 225
           +H  +A  I  F  E       PM      +G   LTE   G+D A   +      +   
Sbjct: 89  IHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTAIIDEETDE 148

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+S    +++ I+ A  +   G   +  ++ D    G    +++ K+G   +
Sbjct: 149 YVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGS 208

Query: 285 ATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334
            T EL F       SN  G      N++         +  LD A + +    V +AE   
Sbjct: 209 ETAELIFDNCRVPKSNLLGKEGKGFNIA---------MTCLDGARIGIGAQAVGIAEGAL 259

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+     +  ++EAA 
Sbjct: 260 EESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A       KY     A  V   A++  GG GY+++  + R YR++    I  G+
Sbjct: 320 A-------KYNASSTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITEIYEGT 366


>gi|107099980|ref|ZP_01363898.1| hypothetical protein PaerPA_01001001 [Pseudomonas aeruginosa PACS2]
          Length = 378

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370


>gi|53717539|ref|YP_105514.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|67640043|ref|ZP_00438865.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121597540|ref|YP_990151.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124383081|ref|YP_001024469.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126447430|ref|YP_001078791.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|167001442|ref|ZP_02267239.1| acyl-CoA dehydrogenase [Burkholderia mallei PRL-20]
 gi|254174101|ref|ZP_04880763.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|254204240|ref|ZP_04910599.1| acyl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|254209209|ref|ZP_04915556.1| acyl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|254355505|ref|ZP_04971785.1| acyl-CoA dehydrogenase [Burkholderia mallei 2002721280]
 gi|52423509|gb|AAU47079.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|121225338|gb|ABM48869.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124291101|gb|ABN00371.1| acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126240284|gb|ABO03396.1| acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147745124|gb|EDK52205.1| acyl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|147750432|gb|EDK57502.1| acyl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|148023598|gb|EDK82660.1| acyl-CoA dehydrogenase [Burkholderia mallei 2002721280]
 gi|160695147|gb|EDP85117.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|238520688|gb|EEP84146.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|243062761|gb|EES44947.1| acyl-CoA dehydrogenase [Burkholderia mallei PRL-20]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +      Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVGMKLRAEP-RGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S             I   +  + A  +  EA++ +GG+GYI E S+ R
Sbjct: 305 LYAVGRHLDAGGSAHPRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYSVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|284167040|ref|YP_003405318.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284016695|gb|ADB62645.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 378

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 39/284 (13%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M  PR  + +  +     Y P   A   +TSVA+ +  +E   G+D+ ++++  ++  DG
Sbjct: 89  MVAPRAIEMFGSEAVKERYLPGVTAG--ETSVAVAI--SEPEAGSDVGSMSTTVEE-RDG 143

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
              L+G K W      +DA ++ A+    +G  LV  L +DG      Y  + + +  + 
Sbjct: 144 ELVLNGEKIWVSHVEQADAAVVWAKFPEGLGS-LVLDLDDDGVEIAQHYTNMADHVQTQ- 201

Query: 284 NATVELEFSNTFGFLLGDL-----NVST----GPVEDMKILIY--LDSAIMSVSGMRVSL 332
                        F + D+     NV T    G  + +K L +  L SA +S +    ++
Sbjct: 202 -------------FYMEDIVVPEENVLTRGKEGFKDQLKALNWERLGSATLSNAIAGCAI 248

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAA 391
             A+ YA++R   G  + D   ++  +AD+   +  + AL++R A N+ ++ +       
Sbjct: 249 DHALEYAQQREQFGQPIGDFQGIEWKLADMVKQLEGSRALTYRAAVNAHEQGRIPD---- 304

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
             R+ A I K    +M   V++EA++  G +GY  E  +   YR
Sbjct: 305 --RLDASIAKLTSGEMVEDVVSEALQIHGANGYQREHPLEYLYR 346


>gi|270157746|ref|ZP_06186403.1| glutaryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289163985|ref|YP_003454123.1| glutaryl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269989771|gb|EEZ96025.1| glutaryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857158|emb|CBJ10974.1| putative glutaryl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D +++ +  +K+ DG +CL+G K W  +SP++D  I+ A
Sbjct: 118 PGMATGEIIGCFGLTEPDFGSDPSSMRTTAKKV-DGGWCLNGAKMWITNSPIADIAIVWA 176

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + +  +  F+V     D   +GL    +K K+  R++ T EL F N F
Sbjct: 177 KTDEGIRGFIV-----DTDSHGLSRPEIKLKMSLRASITGELVFDNVF 219


>gi|226308745|ref|YP_002768705.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229488635|ref|ZP_04382501.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|226187862|dbj|BAH35966.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229324139|gb|EEN89894.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 120/298 (40%), Gaps = 29/298 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +  +TT    + W PK  + E             +   +G+TE  GG+D+A++ +  
Sbjct: 109 APYLVQLTTEEQKQRWLPKFCTGE-------------MLTAIGMTEPSGGSDLASLKTTA 155

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  + ++G K F+++   +D  I+ A+         +     +    G    R  +
Sbjct: 156 VKDGDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLD 214

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G   + T EL F N       ++G+++   G +  M++L    + +A+ +++     L
Sbjct: 215 KVGQHESDTAELFFENVRVPSTNIIGEID--RGFIHMMEMLPQERVGAAVSNIAHAAPIL 272

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E + YA+ R   G  +      K  +AD+   I    A         D   +       
Sbjct: 273 EETLQYAKDRKAFGQPIGSLQWNKFLLADLVTRIEVTQAY-------VDNCVAAHAAGEL 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             I A   K+W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M
Sbjct: 326 TAIDAAKAKWWTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIM 383


>gi|73999765|ref|XP_535433.2| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) isoform 1 [Canis familiaris]
          Length = 423

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 59/301 (19%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGD-YYILNG 191

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  I+ A+ +  V    VP        ++E   P G    +  +K+G R
Sbjct: 192 NKFWITNGPDADILIIYAKTDLAV----VPASRGITAFIVEKNMP-GFSTSKKLDKLGMR 246

Query: 283 SNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRV 330
            + T EL F       +N  G L   + V         ++  LD   + +SG     M+ 
Sbjct: 247 GSNTCELIFEDCKVPAANILGHLSKGVYV---------LMSGLDLERLVLSGGPLGLMQA 297

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L   I Y   R   G  +    +M+  +AD+   + A     + +A + D+    +++ 
Sbjct: 298 VLDHTIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDQGHCTAKDC 357

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A   +       +  + A  V  + ++C G +GYI +  + R  R++    I  G+G + 
Sbjct: 358 AGVIL-------YSAECATRVALDGIQCFGANGYINDFPMGRFLRDAKLYEI--GAGTSE 408

Query: 451 V 451
           V
Sbjct: 409 V 409


>gi|328882607|emb|CCA55846.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 47/275 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTSAPTAEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F V     D    G    R  +K+G R++ T EL F         D+ V   PV
Sbjct: 184 RHGISLFAV-----DTKSEGYSIGRKLDKLGLRTSDTAELAFV--------DVKV---PV 227

Query: 310 EDM-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           ED+     K   YL           A  + +  + ++  A  Y + R V G  +      
Sbjct: 228 EDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVRFAQQYVQERTVFGKPVAHFQNT 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           K  +A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI   
Sbjct: 288 KFELAACQAEVDAAEAVADRALEALDAGELTPAEAASAKL-------FCTEVAHRVIDRC 340

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 341 LQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|126643026|ref|YP_001086010.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 342

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 80  IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 138

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 139 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 198

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G+   + + I Y + R   G  LI+   +    A++  ++ A  AL+++
Sbjct: 199 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 258

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++ A+ A++ A        +++  V    ++  GG+G++ +   ++ YR
Sbjct: 259 ACEQHIAGEDVTKLASMAKLKAG-------RLSREVADSCLQYWGGNGFMWDNPASQLYR 311

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 312 DGRLGSIGGGADEIMLGIICKLMD 335


>gi|91211231|ref|YP_541217.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|91072805|gb|ABE07686.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
          Length = 342

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 24/266 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   IG + LTE   G+D+  + ++ Q+  DG       KW     ++D FI+L  
Sbjct: 74  PKLATGELIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGKKKWITLGQIADFFIVLIH 133

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              ++   L+ R     + +G     L + +G R N   EL F++       LLG L   
Sbjct: 134 CGNQLATVLIDR-----NTDGFTITPLNDMLGLRGNMLAELHFNDCRLKEDALLGPLT-- 186

Query: 306 TGPVEDMKILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             P   + +   L+     +A  S+   R ++  A  Y R+R      L    +++   A
Sbjct: 187 --PGVPLAVNFALNEGRFTTACGSLGLCRAAVDVAARYIRQRKQFKRRLFSHGIVQHLFA 244

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +     +A  + F  A    E +     A   +I+  + KY   K A  V  +A++ +G
Sbjct: 245 TMLTQTRSAQLMCFSAA----EYRETLHPAMINQIL--MAKYVASKAAVDVAGKAVQLLG 298

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +G   + ++ R+YR++    I+ G+
Sbjct: 299 ANGCHADYAVERYYRDAKIMEIIEGT 324


>gi|56696828|ref|YP_167190.1| glutaryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678565|gb|AAV95231.1| glutaryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 436

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A++ ++  K ++G Y L+G K W  ++P++D F++ A+    +G++  
Sbjct: 178 FGLTEPDAGSDPASMKTRAVK-TEGGYRLTGTKMWISNAPIADVFVVWAKSDAHDGKIRG 236

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDM 312
           F    +LE G   GL   +++NK+  R++ T E+       G   LL  ++   GP    
Sbjct: 237 F----VLEKGM-KGLSAPKIENKMSLRASITGEIVMDGVEVGEEALLPHVSGLKGP---- 287

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AEA  +  R++       ++P     + +  +A++  +IA
Sbjct: 288 --FGCLNRARYGISWGVMGAAEACWHGARQYGLDRKQFNRPLAQTQLFQLKLANMQTEIA 345

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEAK+  E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 346 LGLQASLRVGRLMDEAKAAPE-------MISIIKRNNCGKALEIARHARDMHGGNGISLE 398

Query: 428 RSIARH 433
             + RH
Sbjct: 399 FQVIRH 404


>gi|319763465|ref|YP_004127402.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824288|ref|YP_004387591.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118026|gb|ADV00515.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309660|gb|AEB84075.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 25/285 (8%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           +P  H  W P+  S E+               G  LTE RGG+  A + ++  +  +G  
Sbjct: 106 SPGQHARWLPRAASGEW-------------LAGFALTEPRGGSHPADLRTRATREGEGAH 152

Query: 226 YCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K F+S+     F ++ A+ +   G   V   + +    G+     +  +G +  
Sbjct: 153 YRIDGVKHFISNAKEARFLVVFAKTDPDAGARGVSAFVVETDSPGISISSPERLMGIQGA 212

Query: 285 ATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
              E+ F +        L    TG    MK+L    LD A  ++     +LA+A  + + 
Sbjct: 213 HAFEVAFDSVRVPAANRLGAEGTGFKTAMKVLDNSRLDVAATALGIAEAALADATRWMKE 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R + G  +  +  ++  +AD+ L + A+  L+ +        +  + ++A A++ A    
Sbjct: 273 RQIGGEPIAGKQGLQWMLADMKLRLEASWGLTLQALALRQAGQPFTLQSAMAKLHA---- 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +MA  V   A++  GG GY  E  + R+ R++    I  GS
Sbjct: 329 ---SEMAGFVADAALQIHGGYGYTREMPLERYVRDARILRIYEGS 370


>gi|209546458|ref|YP_002278376.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537702|gb|ACI57636.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 381

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 124 LAMSEAGAGSDVVSMRLRAERKGD-RYILNGTKFWITNAPHADVLVVYAKTDPAAGPKGI 182

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
              ++E G P G    +  +K+G R + T EL F         D  V    +     E +
Sbjct: 183 SAFIIEKGLP-GFSVSKKLSKLGMRGSDTAELVFQ--------DCQVPAEALMGREGEGV 233

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KIL+  LD     ++G  + + +A     + Y R R   G  + D  +M+  IAD+ + +
Sbjct: 234 KILMSGLDYERAVLAGGPLGIMQACMDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVAL 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A A  + +A + D  ++   +AA A + A        + A  V  EA++ +GG+GY  
Sbjct: 294 NSARAYVYSVARACDAGRATRTDAAAAILFA-------SENAVKVSLEAIQALGGAGYTR 346

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 347 EWPVERFLRDAKLYDIGAGT 366


>gi|167573898|ref|ZP_02366772.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 390

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 18/264 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGRVG 254
           L +TE  GG+D+AA+ ++  +   G Y +SG K F++S +   +  +A       +G  G
Sbjct: 130 LAITEPGGGSDVAALRTRAVR-DGGHYVVSGAKVFITSGIRADYYTVAVRTDPSAQGAKG 188

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             L   LL +G   GL    L+ K+G  ++ T  L F +        +    G    +  
Sbjct: 189 LSL---LLVEGDTPGLSKTPLE-KMGWWASDTAHLRFDDCRVPAANLIGAEGGGFPLVMQ 244

Query: 315 LIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L+   ++ S +    V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A
Sbjct: 245 NFNLERFSLAASALGFAEVCYEDALDWARQRRTFGQRIADHQVIRHKLVDMAMRIDATRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              + A   D    R+     +  M    K +  +        A++ +GG GY+      
Sbjct: 305 WLEQCAWQIDHLDKRAPTLVASICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPE 361

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YRE   N  ++G G   +L  L
Sbjct: 362 RIYREVKVN--MIGGGAEEILKDL 383


>gi|119604731|gb|EAW84325.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_b [Homo sapiens]
          Length = 428

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|254696103|ref|ZP_05157931.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|261216537|ref|ZP_05930818.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|260918144|gb|EEX85005.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 380

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+             A   K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESN------VDIICKAASCKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|145608532|ref|XP_370046.2| hypothetical protein MGG_06561 [Magnaporthe oryzae 70-15]
 gi|145015999|gb|EDK00489.1| hypothetical protein MGG_06561 [Magnaporthe oryzae 70-15]
          Length = 426

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 25/247 (10%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM---LAQVEG-- 251
            GLTE   G+D A++   ++      G Y LSG K W  +SP++D  ++   LA  EG  
Sbjct: 160 FGLTEPNHGSDPASMETVARPHPTKKGFYSLSGSKTWITNSPIADILLVWAKLADGEGPS 219

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           ++  FLV R  ++  P  L    +KNK G R++ T  +   N     + + N+       
Sbjct: 220 KIRGFLVER--KNCPPGTLETPAIKNKTGLRASLTGMIHLDNC---PIPEENMFPTVTGL 274

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAI----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
                 L+SA   ++ G+  +L + I     YA  R   G  L    ++++ +AD A D 
Sbjct: 275 KGPFTCLNSARFGIAMGVMGALEDCIAATREYALERSQFGRPLASFQLVQKKLADAATDA 334

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  +  + ++    DE KS  +       M  + K   C  A        E +GG+   +
Sbjct: 335 AYGSLAAIQVGRLIDEGKSVPD-------MISMVKRENCDRALRNARTLQEVLGGNAVSD 387

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 388 EYRIGRH 394


>gi|7669494|ref|NP_039663.1| glutaryl-CoA dehydrogenase, mitochondrial isoform b precursor [Homo
           sapiens]
          Length = 428

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|73538087|ref|YP_298454.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121424|gb|AAZ63610.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 377

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++ +    G + L+G K F+++   +   ++ A  E   G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRARPSERG-WVLNGSKQFVTNGQRAGVAVVFAATEPERGKKGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP      +P G      + K+G R++ T  +   +       LLG+    L ++   
Sbjct: 184 FLVP----TDTP-GFIVHAPEKKLGIRASDTCAITLEDCEVPADALLGEPGEGLRIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ A
Sbjct: 239 LEGGRIGI----AAQAIGIARSAFEAACRYASERVQFGRPLREHPPIANMLADMATELNA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  R A    +      EA+ A       K +  ++A  V ++A++  GG GY+E+ 
Sbjct: 295 ARLLVHRAARMRTQGLPCLSEASQA-------KLYASELAERVCSKALQIHGGYGYLEDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 PVERHYRDARITQIYEGT 365


>gi|328767050|gb|EGF77101.1| hypothetical protein BATDEDRAFT_91934 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 513

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 52/261 (19%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAF--- 243
            P+ +    I L +TE   G+D+AAI +   K  DG  Y ++G  KW  +   SD F   
Sbjct: 231 GPVLRGEKRICLSITEPGAGSDVAAIKATAVKTPDGKFYIVNGTKKWITNGAQSDYFSTA 290

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLG 300
           +      G +   LV R   DG         L+ K       T++  +S++ G    ++ 
Sbjct: 291 VRTGDGPGGISMLLVERA--DG---------LETK-------TIKTSYSSSAGTSYVIME 332

Query: 301 DLNVSTGPVEDM--------KILIY--------LDSAIMSVSGMRVSLAEAIHYARRRHV 344
           +L V   PVE++        ++++Y        +  +I+  S  RV + E   ++ +R V
Sbjct: 333 NLKV---PVENLLGKEGDGFQVIMYNFNHERWVIACSILRSS--RVVVEECFKWSHQRMV 387

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KY 402
            G  LIDQPV++  +A +   IA   A    L N   +    S +    ++  PI   K 
Sbjct: 388 FGKRLIDQPVIRNKLAHM---IAEVEATQNWLENITYQMNKMSYKDQANKLAGPIALLKL 444

Query: 403 WCCKMAPAVIAEAMECIGGSG 423
            C ++A  +  +A +  GG G
Sbjct: 445 QCTRVAHNISDQACQIFGGRG 465


>gi|194901832|ref|XP_001980455.1| GG17152 [Drosophila erecta]
 gi|190652158|gb|EDV49413.1| GG17152 [Drosophila erecta]
          Length = 415

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 156 LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITA 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVE 310
           FL P+ +      GL   + ++K+G R+ +T +L        +L D+ V        P +
Sbjct: 215 FLTPKDVP-----GLTIAKKESKMGMRATSTCQL--------VLEDVQVPRSRVLGAPGD 261

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A 
Sbjct: 262 GFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKQLARMQLIQQKLADMAT 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  L++R A   D     ++EAA A+++A     +C         + ++ +GG GY
Sbjct: 322 RVETSRLLTWRAAWLKDNGLPITKEAAMAKLLASEAATYCAH-------QCIQVLGGMGY 374

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +     +YR +    I  G+     + + N
Sbjct: 375 TIDLPAELYYRNARVTEIYEGTSEIQRIVIAN 406


>gi|260555134|ref|ZP_05827355.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|193077280|gb|ABO12070.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
 gi|260411676|gb|EEX04973.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 430

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAA 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  AR++       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARLL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|185177597|pdb|2R0M|A Chain A, The Effect Of A Glu370asp Mutation In Glutaryl-Coa
           Dehydrogenase On Proton Transfer To The Dienolate
           Intermediate
          Length = 394

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 133 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 190 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 245

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 246 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 306 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 358

Query: 433 H 433
           H
Sbjct: 359 H 359


>gi|241765709|ref|ZP_04763657.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241364426|gb|EER59539.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 398

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D  ++ ++  K + G Y L G K W  +
Sbjct: 114 FGTEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKTAGG-YKLKGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           SP++D F++ A+     G     R  +LE G   GL    +  K+G R++ T E+   + 
Sbjct: 173 SPVADVFVVWAKEVSEGGTVGPIRGFVLEKGM-KGLTAPAIHGKVGLRASITGEIVMDDV 231

Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
           F   + + N     V+ +K     L+SA   ++   +  AE     A  Y   R   G  
Sbjct: 232 F---VPEENAFP-EVQGLKGPFTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQFGRP 287

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I      + R+    DE ++  E       +  + K   C  A
Sbjct: 288 LAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGKA 340

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A + +GG+G  +E  +ARH
Sbjct: 341 LDIARLARDMMGGNGISDEFGVARH 365


>gi|242010281|ref|XP_002425897.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212509873|gb|EEB13159.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 20/255 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ +  +K  D  + ++G K W  +S ++  F++ A          +  
Sbjct: 134 LTEPTSGSDAFSLKTIAKKDGDD-FIINGSKMWISNSDIAQVFLVFANANPESSYKGITA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
              D    GL   + ++K+G R++ T  + F       +N  G        + G + + +
Sbjct: 193 FFVDRDTPGLSVAKKEDKLGIRASGTCMVHFDNVRVPKTNILGEYGQGYKYAAGFLNEGR 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I I   S ++ V+  +      I Y   R      + D   M+  IADIA  I AA  L 
Sbjct: 253 IAI--GSQMLGVA--QGCFDATIPYTLDRKQFRQSIYDFQSMQHQIADIATKIEAARLLV 308

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   +  +S  +EA+ A++       +  ++A  V  + ++ +GG G+ ++    + 
Sbjct: 309 YNAARLVETKQSFVKEASMAKL-------YATEIAHDVTRKCIDWMGGVGFTKDFPQEKF 361

Query: 434 YRESPANSILLGSGN 448
           YR+    +I  G+ N
Sbjct: 362 YRDCKIGTIYEGTSN 376


>gi|77465195|ref|YP_354698.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77389613|gb|ABA80797.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 377

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 34/311 (10%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+ T   VH      I  R   P  +     P  + +      LTE   G+D +A+ S+ 
Sbjct: 81  AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRA 140

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
           ++ + G Y + G K F++S  ++   I+ A++EG  G     CFL P      +P G   
Sbjct: 141 RR-AGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGITCFLTP----TDTP-GYEV 194

Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            ++++K+G  ++ T  L F +         G       ++   +E  +I I    A  SV
Sbjct: 195 VKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETGRIGI----AAQSV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YAR R   G  LI+   +   +A+    + AA  +    A   D  + 
Sbjct: 251 GMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQP 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA A++ A        + A  ++++A++  GG GY  +  + R YR+     I  G
Sbjct: 311 CLTEAAMAKLFA-------SEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEG 363

Query: 446 SGNAMVLDVLN 456
           + +   + +L 
Sbjct: 364 TSDIQKMLILR 374


>gi|321466669|gb|EFX77663.1| hypothetical protein DAPPUDRAFT_53968 [Daphnia pulex]
          Length = 394

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 121/263 (46%), Gaps = 26/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+    + +   
Sbjct: 133 LAMSEPGSGSDVVSMKLKAEKKGD-YYVLNGNKFWITNGPDADVLIIYAKTGAADSKPQH 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
            +   L+E   P     Q+L +K+G R + T EL F       +N  G L   + V    
Sbjct: 192 GITAFLVEKDFPGFRTAQKL-DKLGMRGSNTCELIFEDCKVPEANILGKLNRGVYVLMSG 250

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  ++++    A   V  M+     A  YA  R   G  + +  +++  +AD+   ++A
Sbjct: 251 LESERLVL----ASGPVGIMQACCDTAFDYAHIRKQFGKRIGEFQLIQGKMADMYTTLSA 306

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +  + +A + D   + +++ A   +       +  + A  +  +A++ +GG+GYI + 
Sbjct: 307 CRSYLYNVARACDRGHASNKDCAGVIL-------YTAEKATLMALDAIQILGGNGYINDY 359

Query: 429 SIARHYRESPANSILLGSGNAMV 451
              R+ R++    I  G+G + V
Sbjct: 360 PTGRYLRDAKLYEI--GAGTSEV 380


>gi|300869435|ref|ZP_07114020.1| Acyl-CoA dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|300332565|emb|CBN59218.1| Acyl-CoA dehydrogenase [Oscillatoria sp. PCC 6506]
          Length = 394

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 49/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  K F +EY  T  A     +      L+E   G+D  A+ +   K+S   Y L+G K 
Sbjct: 100 WGSK-FQKEYWLTKLASGDAIAA---FALSEPNIGSDAKAVETTA-KLSGDSYILNGQKK 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W     ++D F++ A+ EG+   FLV    E  SP GL  + +   +G + +   EL  +
Sbjct: 155 WITYGQIADVFLVFAKWEGKPSAFLV----EKNSP-GLSIKPIFGMLGVKGSMLAELHLN 209

Query: 293 NT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA----- 335
           N             FGF     +V++           LD    SV+   V +A+A     
Sbjct: 210 NCRIPQENLVCRQGFGF----SHVASSA---------LDLGRYSVACGCVGIAQACLEAC 256

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y  +R      L +  ++++ I +   +I AA  L ++     D     S       I
Sbjct: 257 IEYTSKRKQFDVYLKEHQLIRQMITEAIANIKAARLLCYQAGYLKDIGDPNS-------I 309

Query: 396 M-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           M   I KY+   +A  V  +A++  G +G   +  + R+ R++    I+ GS
Sbjct: 310 METSIAKYFASTIATKVANDAVQIHGANGCSSQYPVQRYLRDTKIMEIIEGS 361


>gi|226291549|gb|EEH46977.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb18]
          Length = 547

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 271 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 330

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N      +  K
Sbjct: 331 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFEDVKVPVENLIGKEN------QGFK 383

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 384 VIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIE 443

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 444 ASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 500

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 501 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 529


>gi|295668192|ref|XP_002794645.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb01]
 gi|226286061|gb|EEH41627.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb01]
          Length = 547

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 271 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 330

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N      +  K
Sbjct: 331 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFEDVKVPVENLIGKEN------QGFK 383

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 384 VIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIE 443

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 444 ASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 500

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 501 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 529


>gi|170737392|ref|YP_001778652.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819580|gb|ACA94162.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAGKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|307545016|ref|YP_003897495.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307217040|emb|CBV42310.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G+D  +++++  +  +G + L+G K W  +SP++D F++ A+  EG V  F+
Sbjct: 136 FGLTEPDHGSDPGSMSTRATRTENG-WRLNGTKTWITNSPIADVFVIWARDDEGLVRGFI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           + R +     +GL   +++ K   R++ T ++   +        L D+    GP      
Sbjct: 195 LERGM-----DGLSAPKIEGKFSLRASVTGQIAMQDVEVDDAQRLPDVTGLKGPFS---- 245

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   ++   +  AEA  +A R     R   G  L    ++++ +AD+  +IA  
Sbjct: 246 --CLNRARYGIAWGSMGAAEACWHAARDYTLERKQFGRPLAANQLIQKKLADMQTEIALG 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R     DE +   E      +++ I +  C K A  +  +A +  GG+G  +E  
Sbjct: 304 LQAALRAGRMIDEGQLVPE------VISLIKRNNCGK-ALDIARQARDMHGGNGISDEYH 356

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + RH     A +   G+ +   L +L   + G   F
Sbjct: 357 VIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 391


>gi|55669740|pdb|1SIQ|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa
           Dehydrogenase
          Length = 392

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 131 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 188 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 243

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 244 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 304 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 356

Query: 433 H 433
           H
Sbjct: 357 H 357


>gi|120599110|ref|YP_963684.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|146292819|ref|YP_001183243.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|120559203|gb|ABM25130.1| isovaleryl-CoA dehydrogenase [Shewanella sp. W3-18-1]
 gi|145564509|gb|ABP75444.1| isovaleryl-CoA dehydrogenase [Shewanella putrefaciens CN-32]
          Length = 389

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 140/311 (45%), Gaps = 28/311 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S +  ++  +   H +      +R  +   KA   P   +   IG L ++E 
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSGEHIGALAMSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++    +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +   + +
Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY-LDS 320
               G    +  +K+G R + T EL F         +LG LN        +K+L+  LD 
Sbjct: 195 RGFKGFSQAQKLDKLGMRGSNTCELVFEEVEVPEENILGGLN------NGVKVLMSGLDY 248

Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +SG  + +  A     + Y   R   G  + +  +++  +AD+   + AA +  + 
Sbjct: 249 ERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSYVYN 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A S D  ++  ++AA A +       +  ++A  +  +A++ +GG+GY+ E +  R  R
Sbjct: 309 VAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKLYEIGAGT 372


>gi|312131322|ref|YP_003998662.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311907868|gb|ADQ18309.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 384

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 30/270 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+    +     L+E   G+D  +  +  +   D  Y ++G K W  +   +  ++++AQ
Sbjct: 117 PLASGEIIGAFCLSEPEAGSDATSQRTSAEDKGD-FYLVNGIKNWITNGNSASVYLVIAQ 175

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FG 296
               +    +  L+ +    G    + ++K+G R++ T  L F++             FG
Sbjct: 176 THAELRHKGINALIVEKGQEGFLVGKKEDKLGIRASDTHSLNFNDVKVPKDRRIGEDGFG 235

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           F      ++ G        I + +  + ++     L  A+ Y++ R   G  + +   ++
Sbjct: 236 FKFAMSTLNGGR-------IGIAAQALGIAAGAYEL--ALKYSKERKAFGKPISEHQAIQ 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I AA  + ++ A   D+  S  E AA A       K++  ++A     EA+
Sbjct: 287 FKLAEMHAKIQAARWMVYKAAWDKDQGNSYIESAAMA-------KWYASEVAMWATTEAV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+ E  + R  R++    I  G+
Sbjct: 340 QIHGGYGYVREYHVERMMRDAKITQIYEGT 369


>gi|126337974|ref|XP_001369381.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 430

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 29/275 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  M D  I++
Sbjct: 159 PEMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMCDVVIVV 216

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E R     +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 217 AVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGE 276

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            N      ++  P E + I      A +++S       E  +Y ++R   G  +     +
Sbjct: 277 ENKGFYYLMAELPQERLAI------ADLAISACEFMFEETRNYVKQRKAFGKTVAHIQTV 330

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++   I    A         D      E        A + KYW  ++  +V  + 
Sbjct: 331 QHKLAELKTHICVTRAF-------VDSCLQLHEAKRLDSATASMAKYWASELQNSVAYDC 383

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 384 VQLHGGWGYMWEYPIAKSYVDARVQPIYGGTNEIM 418


>gi|55669741|pdb|1SIR|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa
           Dehydrogenase
 gi|185177598|pdb|2R0N|A Chain A, The Effect Of A Glu370asp Mutation In Glutaryl-Coa
           Dehydrogenase On Proton Transfer To The Dienolate
           Intermediate
          Length = 394

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 133 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 190 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 245

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 246 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 306 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 358

Query: 433 H 433
           H
Sbjct: 359 H 359


>gi|255531117|ref|YP_003091489.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255344101|gb|ACU03427.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 453

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 39/265 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQ+  +    GLTE   G+ +A   +   K     + L+G K W  ++  SD  ++ A+ 
Sbjct: 186 MQQMKIIGAFGLTEPEVGSGVAGGLTTTAKRQGNKWLLNGQKKWIGNATFSDITVIWARD 245

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR---------SNATVE----LEFSNT 294
             + +V  FLV +        G   +++++K+  R         +N  V+    L+ +N+
Sbjct: 246 VDDNQVKGFLVRK-----GSKGFAVEKMQDKMALRIVQNGLITLTNCEVDEEDRLQNANS 300

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F      L ++   V           A  +V   R +   A++Y R R   G  +    +
Sbjct: 301 FKDTAKVLKMTRAGV-----------AWQAVGCARGAYESALNYTRTRKQFGKPIASYQL 349

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  + ++  ++ A   L FRL+   D+     E A+ A++       +C      V++ 
Sbjct: 350 IQNHLVEMLSNLTAMQTLCFRLSQLQDQGLLTDEHASLAKV-------FCSMRTRDVVSR 402

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E +GG+G + E  +AR   ++ A
Sbjct: 403 AREVMGGNGILLEYDVARFVADAEA 427


>gi|119505687|ref|ZP_01627757.1| Butyryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119458499|gb|EAW39604.1| Butyryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 32/255 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+GLTE   G+D+ +I  Q ++  D  Y L+G K ++S+ ++   +    V  +    + 
Sbjct: 120 GIGLTEPDAGSDLQSIRLQAKRQGDH-YILNGTKTWISNGINGNCLA---VLTKTNPDIE 175

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLG-DLN 303
           PR       L E G  +G    +   K+G R+  + EL F        N  G   G    
Sbjct: 176 PRHRGMSLFLCEKG--DGFSVGKKLKKLGYRAIDSAELIFDDFHVSADNLIGGEEGRGFQ 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G +E  +I I    A M+     +    A+ YA  R   G  + +   ++  +A+++
Sbjct: 234 QVAGGLELGRINIAARGAGMAKGATDM----ALRYAMERKTFGKPIAEHQAIQLKLAEMS 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              +AA  L  + AN FD+ +    EA  A       K++  + A     +AM   GG  
Sbjct: 290 TRASAAELLVKQAANKFDQGERCDLEAGQA-------KFFASESAVQNSLDAMRVFGGYS 342

Query: 424 YIEERSIARHYRESP 438
           Y  E  I R YR++P
Sbjct: 343 YSPEYEIERFYRDAP 357


>gi|254437657|ref|ZP_05051151.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198253103|gb|EDY77417.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 387

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + ++ +D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMSLRAERRNDH-YVLNGTKYWITNGAEADTLVVYAKTDPSAGSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F +    F  +LG+          +++L
Sbjct: 187 TAFLIEKSMIGFTTSAHFDKLGMRGSNTAELVFDDVQVPFDNVLGEEG------RGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   L E + Y  +R   G  + +  +M+  +AD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEVMPYIAQRKQFGEPIGNFQLMRGKVADMYTALNSA 300

Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGY 424
            A  + +A + D+   +R++ AA            CC    + A     +A++ +GG+G+
Sbjct: 301 RAYVYEVAKACDKGTVTRADAAA------------CCLYASEQAMVQAHQAVQALGGAGF 348

Query: 425 IEERSIARHYRESPANSILLGS 446
           + +  +AR +R++    I  G+
Sbjct: 349 MADAPVARLFRDAKLMEIGAGT 370


>gi|166712673|ref|ZP_02243880.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 391

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWAHTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                +    G     + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 196 -----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAGLKAPLSCLNQA 250

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L
Sbjct: 251 RYGIAWGAIGAAVACLREALTYAGERILFGRPLAATQSAQIKLADMARGISTAQLLALQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +    R E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 311 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|28869926|ref|NP_792545.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853171|gb|AAO56240.1| acyl-CoA dehydrogenase, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 447

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 124/293 (42%), Gaps = 34/293 (11%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226
           H +      +R  +P  KA   P   +   +G L ++E   G+D+ ++  +  K  D  Y
Sbjct: 155 HSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEPNAGSDVVSMKLRADKRGD-RY 213

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K W  + P +D +++ A+ +       +   + +    G       +K+G R + 
Sbjct: 214 VLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSN 273

Query: 286 TVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLA 333
           T EL F        N  G L G + V         ++  LD   + +SG     M+  + 
Sbjct: 274 TCELFFDDVQVPEENLLGALDGGVRV---------LMSGLDYERVVLSGGPTGIMQACMD 324

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  ++  ++AA  
Sbjct: 325 VVVPYIHDRKQFGQSIGEFQLIQGKIADMYTHLNASRAYLYAVAQACDRGETTRKDAAGV 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       +  + A  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 385 IL-------YSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGT 430


>gi|120555047|ref|YP_959398.1| butyryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
 gi|120324896|gb|ABM19211.1| Butyryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
          Length = 388

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 34/311 (10%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MVA   +  + +++ P++ S E+  +               LTE   G+D A++ ++  +
Sbjct: 96  MVASFASDDLKQEFVPRLASGEWLAS-------------YCLTEPGAGSDAASLRTRAVR 142

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y ++G K F+S +  +D  +++A+  +   G   +   +   +  G+ Y + + K
Sbjct: 143 DGDS-YVINGSKMFISGAGATDVLVLMARTGDADSGAKGISTFVIPANAEGVSYGKNEEK 201

Query: 279 IGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +G  S  T       V +  SN  G       ++   ++  ++ I    A  S+ G + +
Sbjct: 202 MGWHSQPTRMVTLEDVRIPASNRVGEEGDGFAIAMKGLDGGRLNI----ATCSLGGAQAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A +Y   R   G  L     ++  +AD+A ++ AA  +    A   D          
Sbjct: 258 LLRARNYLHERQQFGKPLAAFQALQFKLADMATNLVAARQMVRLGAFKLDAGDPE----- 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A +   + K +       V  EA++  GG GYI E  + R+ R+   + IL G+   M 
Sbjct: 313 -ATLHCAMAKRFATDACFEVANEALQLHGGYGYIREYPLERYVRDLRVHQILEGTNEIMR 371

Query: 452 LDVL-NLLEKG 461
           L +   +LE G
Sbjct: 372 LIIARRMLEDG 382


>gi|158314760|ref|YP_001507268.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110165|gb|ABW12362.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 389

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W PK+ S E+              IG + +TE   G+D+ AI ++  +  D  Y + G K
Sbjct: 119 WLPKLISGEW--------------IGAIAMTEPSTGSDLQAIKARAVQDGDD-YIIMGSK 163

Query: 233 WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            F+S+  +   +++A       G  G  LV   + D  P G    R+  KIG +   T E
Sbjct: 164 TFISNGHNADLVIIAVKTDPSLGARGVSLVVAEVGD-DPPGFQRGRIIEKIGQKGQDTTE 222

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F         LLG +    G  + M+ L    L  A+ +V+ +  ++A  I Y + R 
Sbjct: 223 LFFDGLRVPTSHLLGGVE-GRGFAQLMEQLPQERLICAVAAVAAIERAVALTIDYTKTRT 281

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402
             G  L D    +  +A+ A  IA       R++ SF D+   +  + A     A + KY
Sbjct: 282 AFGKPLFDMQHTRFELAECAT-IA-------RVSRSFLDDCIEQHLKGALDVTTAAMAKY 333

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +      AVI   ++  GG GY  E  I R Y ++    I  G+   M
Sbjct: 334 YLTDQQCAVIDRCLQLFGGYGYTTEYPIGRMYTDARVQRIYAGANEVM 381


>gi|39970147|ref|XP_366464.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|149209547|ref|XP_001522148.1| hypothetical protein MGCH7_ch7g256 [Magnaporthe oryzae 70-15]
 gi|86196211|gb|EAQ70849.1| hypothetical protein MGCH7_ch7g256 [Magnaporthe oryzae 70-15]
 gi|145017682|gb|EDK02045.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 470

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           L ++E   G+D+ ++ ++  + +DG  + L+G K W  + P +D  I+ A+ +       
Sbjct: 205 LAMSESGSGSDVVSMRTRATRTADGSGWLLNGSKMWITNGPDADVIIVYAKSDTECQPSK 264

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
            +  F+V R      P   C ++L +K+G R + T EL   N       +LG++N     
Sbjct: 265 GITAFIVER-----QPGLQCLRKL-DKMGMRGSNTGELVLENVIVPDENVLGEVNAGVRV 318

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +   L  L  +   +  M+ +L  A+ YA  R   G  + +  +++  +AD+   +  
Sbjct: 319 LMEGLDLERLVLSAGPLGIMQAALDVALPYAHARQQFGRPIAEFQLVQGRLADMYTKLQV 378

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A ++  A   DE    S E   A     I   +  + A  V  + ++ +GG GY E+ 
Sbjct: 379 SRAYTYATARRIDE----SGEIKTADCAGAI--LYAAERATEVALDCIQVLGGMGYTEDM 432

Query: 429 SIARHYRESPANSILLGSGNAMV 451
             +R  R++    I  G+G + V
Sbjct: 433 PASRLLRDAKLYEI--GAGTSEV 453


>gi|296271318|ref|YP_003653950.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296094105|gb|ADG90057.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 30/266 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++W P++ S E              AIG  GLTE   G+D  ++ +  ++   G + L+G
Sbjct: 114 QEWLPRLASGE--------------AIGCFGLTEPDHGSDPGSMRTYAKQDPSGDWILNG 159

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +  ++D  ++ AQ +  +  F+VP      S  G   Q +  K+  R++ T  L
Sbjct: 160 SKMWITNGSIADVAVVWAQTDSGIRGFIVP-----ASTPGFSAQEIHRKLSLRASVTSSL 214

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGG 347
            F +        L   TG    +  L      I+   V   R  L  A+ YAR R   G 
Sbjct: 215 HFDDVRLPASAVLPGVTGLKGPLSCLTEARYGILWGVVGAARACLEAAVDYARTRIQFGK 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    + +R +A +A+ +  A   +  L    +  + +  + ++ ++          + 
Sbjct: 275 PIGAFQLTQRKLAWMAVALGQAGLTALHLGRLKEAGRLKPRQVSFGKLAN-------VRA 327

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +  EA   +G +G   E  + RH
Sbjct: 328 ALDIAREARSILGANGITLEYPVIRH 353


>gi|53718122|ref|YP_107108.1| hypothetical protein BPSL0483 [Burkholderia pseudomallei K96243]
 gi|126454302|ref|YP_001064822.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|167717959|ref|ZP_02401195.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167736981|ref|ZP_02409755.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
 gi|167814084|ref|ZP_02445764.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167844183|ref|ZP_02469691.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167892690|ref|ZP_02480092.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167909404|ref|ZP_02496495.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167917435|ref|ZP_02504526.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|242316696|ref|ZP_04815712.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254196292|ref|ZP_04902716.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254259014|ref|ZP_04950068.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|52208536|emb|CAH34472.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|126227944|gb|ABN91484.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|169653035|gb|EDS85728.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|242139935|gb|EES26337.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254217703|gb|EET07087.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 623

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|317126619|ref|YP_004100731.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590707|gb|ADU50004.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 392

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 33/267 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++W P++ + E              AIG  GLTE   G++   + ++ ++  D  + L+G
Sbjct: 122 QEWLPRLAAGE--------------AIGCFGLTEPDFGSNPGGMRTRARRDGDD-WILTG 166

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +K W  +  ++D  ++ AQ + R+  F+VP         G     +K K+  R++ T EL
Sbjct: 167 NKMWITNGSVADVAVVWAQTDDRIRGFVVPT-----DTPGFSAPEIKKKLSLRASVTSEL 221

Query: 290 ---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
              E       +L +    +GP+  +    Y      S+   R SL  AI YA  R +  
Sbjct: 222 VLDEVRLPASAILPEAAGLSGPLSCLNEARY-GIIFGSLGAARDSLETAITYALERQIFD 280

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    + +  +AD+AL++     L+  L    DE   +S + +  ++          +
Sbjct: 281 RPLAAFQLTQAKLADMALELGKGMLLALHLGRLKDEGLLQSNQVSLGKLNN-------VR 333

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            + A+  E    +G +G   E  + RH
Sbjct: 334 ESIAIARECRTILGAAGITLEYPVMRH 360


>gi|297690737|ref|XP_002822765.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           2 [Pongo abelii]
          Length = 414

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y LSG K F+S +  SD ++++ +  G     + C 
Sbjct: 159 LTEPGSGSDAASLLTSAKKQGDH-YILSGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 218 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 267

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 268 ----AVKGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMAT 323

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 324 RLVAAR-LMIR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 377

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 378 LKDYAVQQYVRDSRVHQILEGSNEVM 403


>gi|257057020|ref|YP_003134852.1| butyryl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586892|gb|ACU98025.1| butyryl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 27/274 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GC 255
            GLTE  GG+D +A T     + +G + ++G K F+++  +D    I +  V G+   G 
Sbjct: 124 FGLTEPGGGSDASA-TRTTATLDNGEWVVNGSKSFITNSGTDITRLITVTAVTGQKPDGG 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
             +  ++     +GL  Q   +K+G  ++ T  L F +     G LLG+           
Sbjct: 183 KEISAIIVPSGTSGLTVQPKYSKVGWNASDTHGLTFDDCRVPEGNLLGERGRGY-----A 237

Query: 313 KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + L  LD   ++++ + V LA     E + Y + R   G  + +   ++  IAD+ L   
Sbjct: 238 QFLSILDEGRVAIAALSVGLAQGCVDECLRYVKEREAFGRKIGEYQSIQFKIADMELRTH 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A    ++ A      +   +EAA A++ A          A     +A +  GG G++ E
Sbjct: 298 TARLAYYQAAAKMLRGERFKKEAAIAKLAA-------SNAAMDNARDATQIFGGYGFMNE 350

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             + R YR+  A  + +G G + V  +L   E G
Sbjct: 351 YPVGRFYRD--AKILEIGEGTSEVQRMLIARELG 382


>gi|149922645|ref|ZP_01911073.1| isovaleryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149816531|gb|EDM76028.1| isovaleryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 386

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 27/248 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCF 256
           G+G+TE   GTD+  +T+    + DG  Y ++G K ++++      F++ A+++ R+  F
Sbjct: 127 GMGMTEPGAGTDVLGMTTTA--VDDGDHYVVNGTKTYITNGCEGHCFLVYAKLDDRITSF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           ++ R        G       +K+G R +   EL F       +N  G   G L      +
Sbjct: 185 VIDR-----DCPGFSTSNHIDKLGMRGSTMSELIFEDCRVPKANLLGEPGGGLTHMMRNL 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  ++ +    A MSV      +   + YA +R      L     ++R I D      AA
Sbjct: 240 EIERLTL----AAMSVGIATRCVEIMVDYAAQRKAFKQPLNRFGQIQRYIGDGYAMTEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++ +A   D  K        +R+ +   K +   +   V   AM+ +GG+GY  E  
Sbjct: 296 RCLTYNVARDVDPNKR-------SRVGSDAAKLFAAPVGKQVADWAMQVMGGAGYCREYP 348

Query: 430 IARHYRES 437
           + R +R++
Sbjct: 349 VERLWRDA 356


>gi|94314356|ref|YP_587565.1| long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358208|gb|ABF12296.1| Long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 387

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 43/292 (14%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-- 249
           KT +AI +  TE   G+D+A I ++ ++  DG + ++G K F+S+   +DA I++A+   
Sbjct: 122 KTILAIAM--TEPGAGSDLAGIGARAER-RDGGWVINGAKTFISNGHNADAVIVVARTNP 178

Query: 250 -EGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            E R  G F+V R +  G   G   +RLK K+G  +  T EL F++ F   + D NV   
Sbjct: 179 DERRAFGLFVVERGMA-GFERG---RRLK-KLGLDAQDTAELFFNDVF---VPDENVLGN 230

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSG---GILID-QPVMKR 357
           P      L        L  A  S++  + +    + Y + R   G   G L + + V+ R
Sbjct: 231 PARGFAYLAEGLEEERLLCACQSIAHAQSAFDLTLPYVKERRAFGRPIGALQNTRFVLAR 290

Query: 358 AIADI-ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             A++ A+ I     +    A   D             + A   K    ++   VI + +
Sbjct: 291 RRAELDAMQIWLDALVMEHNAGRLDA------------VTAASAKLLSTELENRVIDDCL 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           +  GGSGY++E  I+R YR++  + I  G+   M    L ++ +   L E++
Sbjct: 339 QLHGGSGYMDEYRISRMYRDARVSRIFAGASEIM----LEIISRSLGLTERM 386


>gi|307106480|gb|EFN54726.1| hypothetical protein CHLNCDRAFT_24676 [Chlorella variabilis]
          Length = 455

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 129/290 (44%), Gaps = 36/290 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + ++  D  Y L G K W  + P++D  I+ A+ +   G    
Sbjct: 177 LAMSEPNAGSDVVSMRMRAERRGD-RYVLDGSKMWITNGPIADTLIVYAKTKADAGPHGI 235

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG--P 308
             F++ + ++     G    +  +K+G R + T EL F         +LG  N ++G  P
Sbjct: 236 TAFIIEKGMQARRGAGFSTAQKLDKLGMRGSDTCELLFEGCEVPAENVLGQENQASGGAP 295

Query: 309 VEDMKIL-IY-----LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
               ++  +Y     LD   + +S      M+  L   + Y   R   G  + +  +++ 
Sbjct: 296 ARLCRLWGVYVLMSGLDYERLVLSAGPLGLMQACLDTVLPYVHERQQFGAKIGEFQLIQA 355

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+     AA +  +  A + D  ++  ++ A A I+      +  + A  +  +A++
Sbjct: 356 KLADMYTTTQAARSFIYATARAADAGRASRKDCA-AVIL------YSAEAATRMALDAIQ 408

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +GG+GYI E    R  R++    I  G+G + +  +L     G  LF++
Sbjct: 409 ILGGNGYINEYPTGRLLRDAKLYEI--GAGTSEIRRIL----IGRELFKE 452


>gi|301065038|ref|ZP_07205383.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300440887|gb|EFK05307.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 381

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 31/282 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236
           F  E      AP   +   IG   LTE   G+D + I  +G  ++DG  Y ++ +K F++
Sbjct: 101 FGSEEQIAKWAPPLASGQKIGAFCLTEPNAGSDASGI--EGTAVADGDAYVVNTNKVFVT 158

Query: 237 SP-MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +  ++D  ++  +       G +   +  R    G+P G     L++  G R+N    + 
Sbjct: 159 NGGVADICLLFLKTNPYDDPGEISVVVAER----GTP-GFVVGDLEDLCGMRANPVSSIR 213

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
               +   L   N+       +KI L  LD+  M ++   + +A+A     I YA++R  
Sbjct: 214 L---YDCRLSRENLLGRAGMGLKIGLATLDTGRMGIAAQALGIAQAAMEEGILYAQQRRQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L     ++  IAD+   + A+  +++R A   D  KS S+E+A A++ A      C
Sbjct: 271 FRVPLAKHQAIQMMIADMGTLVEASRLMTYRAAAFRDAGKSFSQESAMAKLFASEA---C 327

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K    V   A++  GG GY +  ++ R+YR++    I  GS
Sbjct: 328 SK----VTDMAVQIHGGYGYSKSYAVERYYRDARVTRIYEGS 365


>gi|298487195|ref|ZP_07005244.1| Isovaleryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158219|gb|EFH99290.1| Isovaleryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 433

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 34/293 (11%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226
           H +      +R   P  KA   P   +   IG L ++E   G+D+ ++  +  K  D  Y
Sbjct: 141 HSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEPNAGSDVVSMKLRADKRGD-RY 199

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K W  + P ++ +++ A+ + +     +   + +    G       +K+G R + 
Sbjct: 200 VLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSN 259

Query: 286 TVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLA 333
           T EL F N         G L G + V         ++  LD   + +SG     M+  + 
Sbjct: 260 TCELFFDNVEVPEENLLGVLDGGVRV---------LMSGLDYERVVLSGGPTGIMQACMD 310

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  ++  ++AA  
Sbjct: 311 VVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGETTRKDAAGV 370

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       +  + A  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 371 IL-------YSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGT 416


>gi|170043822|ref|XP_001849570.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167867122|gb|EDS30505.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 422

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+  + ++ +K  D  + ++G K W  +  +++ + +LA+      C     
Sbjct: 159 VTEPGAGSDVNGVRTRAEKKGDE-WVINGQKMWITNGGVANWYFVLARTNPDPKCPASKA 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 218 FTGFIVERETP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 273

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     +   +AD+A+ +  A 
Sbjct: 274 GTFDKTRPPVAAGAVGLAQRCLDEAMKYALERKAFGVPIAAHQAVSFMLADMAIGVETAR 333

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+ +  S         A I K +   MA  V ++A++  GG+G+  E  +
Sbjct: 334 LITMKSAWEVDQGRRNS-------YYASIAKCYAADMANKVASDAVQVFGGNGFNTEYPV 386

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 387 EKLMRDAKIYQIYEGT 402


>gi|325832743|ref|ZP_08165506.1| putative butyryl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|325485882|gb|EGC88343.1| putative butyryl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 391

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 42/276 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           LG TE   G+D +++ S  Q+  DG   L+G K F+++ ++  +++    +         
Sbjct: 121 LGFTEPGAGSDSSSLASTYQR-RDGKVYLNGSKSFMTNAVNSKYMLCVARDADDDPEDRA 179

Query: 252 ---RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT------------F 295
              R   + VP   ++G+   G+  + L+ KIG     T EL   +              
Sbjct: 180 NRSRFSMWWVPLHDDEGNLAQGISIEPLE-KIGWNMGNTCELHMQDVELEEKDLVGVEGN 238

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           GF+   +N       +++ LI   +   S+   + +  +A+ YA +R   G  +    ++
Sbjct: 239 GFMQAMVNF------EVERLI---ACAQSLGAAQCAFEDAVRYATQRIQFGKPIGKNQLI 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  I D+ L I       ++ A   D  +S        +I + + K +C + A  V   A
Sbjct: 290 QEHITDMYLKIENMRNWVYKTAWKIDNGES-------VQIDSAVAKLYCGRAAFEVCDTA 342

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY ++  I+R +R+     I  G+   M+
Sbjct: 343 LQVMGGIGYTKDCRISRLWRDQRVYRIGAGTDEIMI 378


>gi|221200243|ref|ZP_03573285.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221205924|ref|ZP_03578938.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221209281|ref|ZP_03582262.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221169969|gb|EEE02435.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221173936|gb|EEE06369.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221179584|gb|EEE11989.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVDAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|153010429|ref|YP_001371643.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562317|gb|ABS15814.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 375

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ ++  D  Y + G K F++S  + + +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARRDGDH-YVIDGSKQFITSGKNGSVVIVFAVTDPSAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVS 305
              F+VP         G     +++K+G  S+ T  L F+N        LGD      ++
Sbjct: 179 ISAFIVPT-----DTPGYEVVSVEHKLGQHSSDTCALAFTNMRIPVENRLGDEGQGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  SV   R +   A  YA+ R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQSVGMARAAFEAACAYAKERITFGKPIIEHQAVSFRLADMATK 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        KMA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SKMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|169595978|ref|XP_001791413.1| hypothetical protein SNOG_00736 [Phaeosphaeria nodorum SN15]
 gi|111071111|gb|EAT92231.1| hypothetical protein SNOG_00736 [Phaeosphaeria nodorum SN15]
          Length = 554

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 23/273 (8%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE 250
           K    I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  
Sbjct: 273 KGETRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTG 332

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
           G  G   V  LL + +  G+  +R+  + G  S+ T  + F +       L+G  N    
Sbjct: 333 GE-GMNGVSVLLIERAAGGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKENQGFK 390

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            V        +   I S+   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 391 VVMTNFNHERIGIIIQSLRFARVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIE 450

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +  +E  A  ++   I         T  +C + A  +       
Sbjct: 451 ASYNW---LENMVYQCQKMNEMEAMLKLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYS 507

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 508 RGGQG----AKVERLYRDVRAYAIPGGSEEIML 536


>gi|111020016|ref|YP_702988.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819546|gb|ABG94830.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 396

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 125/307 (40%), Gaps = 41/307 (13%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+A   TP     + P++ + E                   ++E   G+D+AAI ++ 
Sbjct: 99  AHMIANHGTPEQKAHYLPRMATGELRGA-------------FSMSEPELGSDVAAIRTKA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRVGCFLVPRLLEDGSP-NG 269
            + +DG Y + G K +L++  S   + +        A+    +  FL+ +    G    G
Sbjct: 146 ARAADGNYVIDGQKMWLTNGGSSTLVAVLVRTEEGAAKPHDNLTAFLIEKPAGFGEVLPG 205

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLG-DLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           L      +K+G +   T E+ FS   G+  G D  +   P    + ++  ++   ++V+ 
Sbjct: 206 LTIPGKIDKMGYKGIDTTEMVFS---GYQAGADTILGGDPGRGFRQMMDGVEVGRVNVAA 262

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+      + YA+ R   G  + +   +   IA++A  + AA  +    A   D 
Sbjct: 263 RACGIAQRAFELGVKYAKTRETFGSPIAEHQAIAFRIAEMATKVEAAHLMMVNAARLKDS 322

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +          + A + KY   +    V  ++    GG GY +E  I R  RE+P   +
Sbjct: 323 GERND-------VAAGMAKYLASEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAP--FL 373

Query: 443 LLGSGNA 449
           L+G G +
Sbjct: 374 LIGEGTS 380


>gi|42523450|ref|NP_968830.1| butyryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39575656|emb|CAE79823.1| butyryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 388

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 119/265 (44%), Gaps = 19/265 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+  + +   D  + L+G K W  +   ++ FI+ A +    G   +  
Sbjct: 133 LSESSSGSDAFALKLKAEDKGDK-WVLNGSKLWITNGNEANIFIVFANMAPEKGYKGITA 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + +    G    + ++K+G R+++T EL F N     +   NV     +  KI I  L+
Sbjct: 192 FIVERGFKGFSVGKKEDKLGIRASSTCELLFENC---EVPKENVLGEVGKGYKIAIETLN 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSF 374
              + +    + +A+  + A   +V G     +P+     ++  +A++  ++ AA  + +
Sbjct: 249 EGRIGIGAQMIGIAQGAYEAALGYVKGREQFGKPIAHFQGVQFQLAEMRTELEAARLMVY 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D      E AA A++       +  + A  + ++A++  GG+G+ +E  + + +
Sbjct: 309 NAARLKDAGLDFIEAAAMAKL-------YSSRAAEKITSKAIDLFGGNGFTKEYPVEKFW 361

Query: 435 RESPANSILLGSGNAMVLDVLNLLE 459
           R++    I  G+ N M L  +  +E
Sbjct: 362 RDAKIGQIYEGTTN-MQLQTIAKME 385


>gi|88802009|ref|ZP_01117537.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
 gi|88782667|gb|EAR13844.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
          Length = 392

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++ A + +      D  Y L+G K W  ++P +   ++ A+  EGR+   L
Sbjct: 136 FGLTEPNHGSNPAGMETSFVDKGDH-YLLNGAKMWISNAPFAHVAVVWAKNEEGRIHGLL 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G       NK   R++AT EL F+N     +   N+          L  
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFNNV---KVPKENILPNKSGLGAPLGC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L
Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKEREQFGRPIGQFQLQQKKLAEMITEITKAQLL 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RL    +E  + S + + A       K    +MA  +   A + +GG G   E SI R
Sbjct: 307 AWRLGTLKNEGNASSAQISMA-------KRNNVEMAVKIARAARQMLGGMGITGEYSIMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|325519911|gb|EGC99174.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRANKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVDAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|321457567|gb|EFX68651.1| hypothetical protein DAPPUDRAFT_62934 [Daphnia pulex]
          Length = 381

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 23/257 (8%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D+A I ++ +K  D  Y L+G K W  +   ++ + +LA+           
Sbjct: 119 GVTEPGAGSDVANIRTKAEKKGDH-YVLNGQKMWITNGGHANWYFVLARTNPDPKAPPHK 177

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L   +++  +P GL   R +  +G R++ T  + F +    L+   NV  G     KI 
Sbjct: 178 ALTGFIVDRDTP-GLTPGRKEINMGQRASDTRGITFEDV---LVPKENVLIGEGAGFKIA 233

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ YA  R   G  +     +   +AD+A+ I  +
Sbjct: 234 MGAFDQTRPPVAAGAVGLAQRAYDEAMKYAMERKTFGVPIFKHQAVAFMLADMAIGIETS 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R +   D+ +  +  A+ A+ +A      C        A+A++  GG+G+  E  
Sbjct: 294 RLAWMRASWEIDQGRRNTYYASIAKALAGDVANKCA-------ADAVQIFGGNGFNSEYP 346

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 347 VEKLMRDAKIYQIYEGT 363


>gi|289613150|emb|CBI59744.1| unnamed protein product [Sordaria macrospora]
          Length = 588

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 158/422 (37%), Gaps = 95/422 (22%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L C +W+ S    +   A +  AARL         HL +P +            R+ ++ 
Sbjct: 123 LRCHLWEASCANTLCPAAMQDGAARLLQR------HLTTPELVG----------RLSEE- 165

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA---------------------- 212
             ++F   YD       +  +   G  +TE+ GG+D++                      
Sbjct: 166 EKRVFGNAYDHLTSRD-KAYAWTSGQWMTERTGGSDVSQTETVAVYDPFPSSAGPDAKEE 224

Query: 213 ---AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVP------RL 261
              A+ S+ + I  G + +SG KWF S+  S   I+LA+    +G   F+ P       L
Sbjct: 225 VPLALASKEESIPLGPWSISGFKWFSSATDSQMTILLAKTRPGMGVSAFMAPMRRYNPEL 284

Query: 262 L----EDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           +    E G    NG+   RLKNK G     T ELE     G+++G        +  +  +
Sbjct: 285 VSVTGEKGGEELNGITISRLKNKFGTVGLPTAELELKGMRGWMIGKEGEGIKEISTILNI 344

Query: 316 IYLDSAIMSVS--GMRVSLAEAIHYARRRHVSGG---ILIDQPVMKRAIADIALDIAAAT 370
             + + + S+   G  + +A+A    R   V  G    L   P+  R +A +  +     
Sbjct: 345 TRVHTTVSSMGYLGRGIGVAKAYALVREAGVGKGRRLPLYKHPLHMRTLAGLTSEYHGLM 404

Query: 371 ALSFRLAN--SFDE---------AKSRSEEAAYARIMAPIT-----------------KY 402
            L+F        DE           S    A+    + P+T                 K 
Sbjct: 405 LLTFYTLYILGLDEHPSSSSSPSQISSPSSASPPSPLHPLTPPPQLVSSLLRTLSSLHKS 464

Query: 403 WCCKMAPAVIAEAMECIGGSGYI-----EERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           + C  +  +    ME +GG GY+     E  +++R +R++   +I  G+ + +  D +  
Sbjct: 465 FICHTSVPLSFGCMESLGGVGYLVNSESEHLNLSRIFRDACVGAIWEGTTDVLASDTVRA 524

Query: 458 LE 459
           L+
Sbjct: 525 LK 526


>gi|269126739|ref|YP_003300109.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311697|gb|ACY98071.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 23/272 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M    V     ++E   G+D+AAI ++ ++  D  Y + G K W  +   ++   +L + 
Sbjct: 118 MATGEVRGAFSMSEPDCGSDVAAIRTRARRDGDH-YVIDGRKMWLTNGATANLIALLCRT 176

Query: 250 -EG------RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFL 298
            EG       +  FLV +    G    GL       K+G +   T EL    +    G +
Sbjct: 177 DEGADSPHRNMTTFLVEKEPGFGEVAPGLTIPGKIEKMGYKGVDTTELLLDGYRVPAGSI 236

Query: 299 LGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LG +       + D   +  ++ A  +    R +   AI YA+RR   G  + D   ++ 
Sbjct: 237 LGGVPGRGFYQMMDGVEVGRVNVAARACGVARRAFELAIDYAQRRETFGKRIADHQAVRF 296

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A  + AA  +    A   D  +    EA  A       KY   +    V+ +A  
Sbjct: 297 RLAEMATKVEAAHQMMVMAARRKDSGRRNDLEAGMA-------KYLAGEYCKEVVEDAFR 349

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             GG GY  E  I R YRE+P   +L+G G A
Sbjct: 350 IHGGYGYSTEYEIERLYREAPM--LLIGEGTA 379


>gi|257792607|ref|YP_003183213.1| putative acyl-CoA dehydrogenase [Eggerthella lenta DSM 2243]
 gi|317488895|ref|ZP_07947425.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257476504|gb|ACV56824.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316911969|gb|EFV33548.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 391

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 42/276 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           LG TE   G+D +++ S  Q+  DG   L+G K F+++ ++  +++    +         
Sbjct: 121 LGFTEPGAGSDSSSLASTYQR-RDGKVYLNGSKSFMTNAVNSKYMLCVARDADDDPEDRA 179

Query: 252 ---RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT------------F 295
              R   + VP   ++G+   G+  + L+ KIG     T EL   +              
Sbjct: 180 NRSRFSMWWVPLHDDEGNLAQGISIEPLE-KIGWNMGNTCELHMQDVELEEKDLVGVEGN 238

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           GF+   +N       +++ LI   +   S+   + +  +A+ YA +R   G  +    ++
Sbjct: 239 GFMQAMVNF------EVERLI---ACAQSLGAAQCAFEDAVRYATQRIQFGKPIGKNQLI 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  I D+ L I       ++ A   D  +S        +I + + K +C + A  V   A
Sbjct: 290 QEHITDMYLKIENMRNWVYKTAWKIDNGES-------VQIDSAVAKLYCGRAAFEVCDTA 342

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY ++  I+R +R+     I  G+   M+
Sbjct: 343 LQVMGGIGYTKDCRISRLWRDQRVYRIGAGTDEIMI 378


>gi|163760237|ref|ZP_02167320.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162282636|gb|EDQ32924.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 12/253 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SD ++++ +  G  G   +  
Sbjct: 124 LTEPGSGSDAAALRTRAERTNEG-YKLNGAKAFISGGGFSDLYLVMTRT-GADGPKGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           ++ +    GL +   +NK+G RS  T +++F +       LLG+                
Sbjct: 182 VIVEDRTAGLSFGAPENKMGWRSQPTSQVQFDDCLIPADNLLGEEGAGFRYAMSGLDGGR 241

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  ++ G + +L + + Y   R   G  +     ++  +AD+  ++ AA     + A
Sbjct: 242 LNIAASALGGAQSALDKTLTYMGERQAFGKPIDQFQALQFRLADMETELQAARIFLRQAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D       +A  A     + K +    A  V  +A++  GG GY+ +  I +  R+ 
Sbjct: 302 SKLD------RKAPDATKFCAMAKRFVTDTAFNVANDALQLHGGYGYLADYGIEKIVRDL 355

Query: 438 PANSILLGSGNAM 450
             + IL G+   M
Sbjct: 356 RVHQILEGTNEIM 368


>gi|298710746|emb|CBJ32167.1| acyl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 474

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 30/273 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           L+E   G+D  ++ ++     DG  Y + G K W  ++  ++ F + A V+   G     
Sbjct: 214 LSEVGSGSDAFSLATKATLSPDGSYYTIEGEKLWISNAEQAELFFVFANVDPSKGYKGIT 273

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF+V +        G+     ++K+G R+++T  + FS   G  +   NV     +  + 
Sbjct: 274 CFIVEKGF-----GGVTVGPKEDKLGIRASSTCPVTFS---GCEVPATNVLGEVGQGYRY 325

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            I  L+   + +      LA+      + Y   R   GG + D   M+  +A  A ++ A
Sbjct: 326 AIEILNEGRIGIGAQMAGLADGCLSATVPYLFERKQFGGFVGDFQGMQHQVAQAATEVEA 385

Query: 369 ATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+AL +R A    EA +   +EAA       ++K +  ++A    ++ +E +GG G+ + 
Sbjct: 386 ASAL-YRSAARMKEAGQPFVKEAA-------MSKLYTSQVAERTASKCVEWLGGVGFTKA 437

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + YR+    +I  G+ N  +  +  +L K
Sbjct: 438 FLAEKFYRDCKIGAIYEGTSNIQLSTIAKILRK 470


>gi|298244192|ref|ZP_06967998.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551673|gb|EFH85538.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 388

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 42/264 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252
             LTE   G+D A I      + DG  + L+G K F+++     F M+  V  +      
Sbjct: 126 FALTEPGAGSDAANIKMSA--VKDGKHWVLNGEKVFITNGNEADFTMVFAVTDKERGARG 183

Query: 253 VGCFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           V CFLV R           + +  P  L ++ ++       N   EL      GF LG  
Sbjct: 184 VTCFLVDREMGWRSNYIHTMGEWGPASLYFENVRVP---EENILGEL----NQGFTLGMQ 236

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  G           + A  +V      L   I YA+ R   G  + ++  ++  IAD 
Sbjct: 237 WIGAGR---------WNIAARAVGAAERLLQMGIDYAKTRSTFGKPIAERQAIQWMIADS 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            ++I A   L+         A   +EE    R  + I K +   MA  V    M+  GG 
Sbjct: 288 RVEIEATRWLAL-------HAAWMAEEGQDTRHASSIAKLYGSNMANQVADRVMQIHGGM 340

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY +E  I R YRE     I  G+
Sbjct: 341 GYTKELPIERWYREMRVWRIFEGT 364


>gi|302529952|ref|ZP_07282294.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302438847|gb|EFL10663.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 385

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 50/290 (17%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIML 246
           PM  T+ A+G  GLTE  GG+D  A  ++ +   D  + ++G K F+++  +D    + +
Sbjct: 113 PMLTTAEALGGFGLTEPGGGSDAGATRTRARLDGDE-WVINGSKAFITNSGTDITKLVTV 171

Query: 247 AQV-----EGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             V      GR  +   +VP     G+P G       +K+G   + T EL FS       
Sbjct: 172 TAVTDVMENGRKEISAIIVP----SGTP-GFTVAPKYSKVGWNCSDTHELSFS------- 219

Query: 300 GDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345
            D+ V   P E++         + L  LD   ++++ + V LA     E + YA+ R   
Sbjct: 220 -DVRV---PAENLVGKRGRGYAQFLSILDEGRVAIAALSVGLAQGCVDECLKYAKDRVAF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +   ++  IAD+ +    A    ++ A+     +   +EA+ A+++A        
Sbjct: 276 GHRIGEYQAIQFKIADMEVRAHTARLAYYQAASKMLRGEPFKKEASIAKLVA-------S 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             A     +A +  GG G++ E  ++R YR+  A  + +G G + V  +L
Sbjct: 329 NAAMDNARDATQIFGGYGFMNEFPVSRFYRD--AKILEIGEGTSEVQKML 376


>gi|241767502|ref|ZP_04765184.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361674|gb|EER58012.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 380

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 33/288 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           H  W PK+ + E               IG + +TE   G+D+ ++ +  ++  D  Y ++
Sbjct: 110 HDRWLPKMAAGEL--------------IGAIAMTEPGAGSDLKSVRTTAKREGDH-YLIN 154

Query: 230 GHKWFLSSPMSDAFIML----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           G K F+++ ++   +++    A   G  G  L+  ++EDG+P G    R   KIG     
Sbjct: 155 GAKTFITNGINSEIVIVVCKTAPDLGAKGVSLI--VVEDGTP-GFSKGRKLEKIGLMGQD 211

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F N     G LLG+ N+    +        L  A+ +   +   L + + Y R R
Sbjct: 212 TSELFFDNVKVPVGNLLGEENMGFRYLMQELAQERLVVAVRAARCIESFLQKTVDYTRER 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +         +    +A A A +  L    DE      E       A + K 
Sbjct: 272 KAFGQTVFE-------FQNTRFKLAEAKAQATMLRTFVDECMKLHMERKLTPERAAMVKL 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               +   ++ E ++  GG GY+ E  + R + ++    I  GS   M
Sbjct: 325 NATALQNRLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRIYGGSDEIM 372


>gi|126740143|ref|ZP_01755833.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. SK209-2-6]
 gi|126718962|gb|EBA15674.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. SK209-2-6]
          Length = 386

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 38/291 (13%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           A  +F  E       P+ ++  AI    LTE + G+D+A  T   ++  D  Y L+G K 
Sbjct: 99  AISLFGSEAQQAEWLPLTRSGKAISAFALTEPQSGSDVANSTMTARQEGDH-YVLNGEKT 157

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           W  +  ++D + + A+     G      F+VP     G P     +R +  I     AT 
Sbjct: 158 WISNGGIADVYTLFARTGEAPGAKGLSAFVVPA----GLPGFEVVER-QEVIAPHPLAT- 211

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHY 338
            L F++       +LG       P    KI +  LD      A  ++   R +L E +  
Sbjct: 212 -LRFTDCRIPASAMLG------APGHGFKIAMSVLDVFRSTVAAAALGFARRALDETLAR 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMA 397
              R V G  L +  +++  IAD+ALD+ AA  L +R A + D   +R + EAA A    
Sbjct: 265 VSSRTVQGAPLFELQMVQGHIADMALDVDAAALLVYRAAWAKDSGAARVTREAAMA---- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              K +    A  VI +A++  GG G    + +   YR+  A  I  G+ +
Sbjct: 321 ---KLFSTDQAQQVIDKAVQLHGGDGVRRGQKVEELYRDIRALRIYEGASD 368


>gi|76809526|ref|YP_332119.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|76578979|gb|ABA48454.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
          Length = 655

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 171 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 230

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 231 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 289

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 290 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 344

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 345 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 404

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 405 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 464

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 465 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 498


>gi|217419925|ref|ZP_03451431.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|254187842|ref|ZP_04894354.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157935522|gb|EDO91192.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217397229|gb|EEC37245.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 623

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|167901186|ref|ZP_02488391.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|254181910|ref|ZP_04888507.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184212448|gb|EDU09491.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 623

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|70994276|ref|XP_751977.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66849611|gb|EAL89939.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
          Length = 541

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGG-PGM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  
Sbjct: 324 NGISVLLIEREAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGF 376

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I
Sbjct: 377 KVIMTNFNHERIGIVIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQI 436

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAME 417
            A       L N   + +S  E  A  ++          A  T  +C + A  +      
Sbjct: 437 EATYNW---LENIIYQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSY 493

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG G      + R YR+  A +I  GS   M+
Sbjct: 494 SRGGQG----GKVERLYRDVRAYAIPGGSEEIML 523


>gi|118619109|ref|YP_907441.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
 gi|118571219|gb|ABL05970.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 26/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRV 253
           ++E   G+D+AAI ++  + +DG Y + G K +L++  S   + +        AQ    +
Sbjct: 129 MSEPELGSDVAAIRTRATRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGAAQPHRNL 188

Query: 254 GCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             FLV +    G    GL      +K+G +   T E+ F + +     D+   T      
Sbjct: 189 TAFLVEKPTGFGEVLPGLTIPGKIDKLGYKGIDTTEVIF-DGYRATADDILGGTPGQGFF 247

Query: 313 KILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            ++  ++   ++VS      G+R +   A+ YA++RH  G  + +   +   +A++A  +
Sbjct: 248 PMMDGIEVGRVNVSARACGVGLR-AFELAVRYAQQRHTFGKPIAEHQAISFQLAEMATKV 306

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  +          + A + KY   +    V  ++    GG GY +
Sbjct: 307 EAAHLMMVHAARLKDSGERND-------VAAGMAKYLASEYCSEVTQQSFRIHGGYGYSK 359

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  I R  R++P   +L+G G + +
Sbjct: 360 EYEIERLMRDAP--FLLIGEGTSEI 382


>gi|300696615|ref|YP_003747276.1| acyl-coa dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299073339|emb|CBJ52850.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum CFBP2957]
          Length = 405

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%)

Query: 190 PMQK----TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           P Q+    T VA G       L+E   G+D+AA+    +   DG Y L G K W  +  +
Sbjct: 111 PAQRERYLTKVARGEAIAAFALSEPDAGSDVAALACAARADGDG-YVLDGEKTWISNGGI 169

Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT 294
           +D +++ A+     G   +   ++E G+P     +R+     + +         +  +  
Sbjct: 170 ADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPHPLARLRFTGCRIPAAQR 229

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       V+   ++  +  +    A  ++   R +L EA+  A  R +  G+L D  +
Sbjct: 230 VGAAGEGFKVAMRTLDVFRTSV----AAAALGFARRALDEALARATTRRMFNGVLADFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A +A  I +A  L++R A   D+ +S + EAA A++ A        + A  VI  
Sbjct: 286 TQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDA 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG G + E+ + R YRE  A  I  G+
Sbjct: 339 AVQMWGGLGVVSEQPVERLYREIRALRIYEGA 370


>gi|290961561|ref|YP_003492743.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651087|emb|CBG74208.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 396

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 23/262 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A++ +  ++   G + L+G K W  +
Sbjct: 119 FGSEEQKRTWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKR-DGGDWILNGRKMWITN 177

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             ++   ++ AQ E  V  F+VP         G     +K+K   R++ T EL   +   
Sbjct: 178 GSVAGVAVVWAQTEDGVRGFVVPT-----DTPGFSAPEIKHKWSLRASVTSELVLDDVRL 232

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILID 351
               +L ++    GP   +  L +    I+  S+   R S   A+ YAR R   G  +  
Sbjct: 233 PADAVLPEVKGLKGP---LSCLSHARYGIVWGSMGAARASFESAVAYARTREQFGKPIGG 289

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +
Sbjct: 290 FQLTQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQISFGKLNNVREAIEICRTARTI 349

Query: 412 IAEAMECIGGSGYIEERSIARH 433
                  +G +G   E  + RH
Sbjct: 350 -------LGANGISLEYPVMRH 364


>gi|195588545|ref|XP_002084018.1| GD14030 [Drosophila simulans]
 gi|194196027|gb|EDX09603.1| GD14030 [Drosophila simulans]
          Length = 439

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D++ I ++ +K  D  Y ++G K W  +  +++ + +LA+      C     
Sbjct: 156 VTEPGAGSDVSGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  SP GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERDSP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +  + 
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSR 330

Query: 371 ALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  E  
Sbjct: 331 -LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSEYP 382

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 383 VEKLMRDAKIYQIYEGT 399


>gi|156404015|ref|XP_001640203.1| predicted protein [Nematostella vectensis]
 gi|156227336|gb|EDO48140.1| predicted protein [Nematostella vectensis]
          Length = 371

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 36/271 (13%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WF 234
           +F  E       P + +  +    GLTE   G+D  ++ ++ +   S   Y L+G K W 
Sbjct: 89  VFGTEEQRQKYLPRLGRGEIVGSFGLTEPNHGSDPGSMETKAKYNKSSNTYILNGAKTWI 148

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------V 287
            +SP++D F++ A+ E  +   +   +LE G   GL   ++  K   R++AT       V
Sbjct: 149 TNSPIADIFVVWAKCEDNI---IRGFILEKGMA-GLSAPKIDGKFSLRASATGMIVMEDV 204

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           E+   N    LL ++    GP         L+SA   ++   +  AE  +   R++V   
Sbjct: 205 EVPAEN----LLPNVEGLKGPFS------CLNSARYGIAWGALGAAEFCYETARQYVLDR 254

Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +   +P+     +++ +AD+A +I+       ++    DE +       +   M  + K 
Sbjct: 255 VQFGRPLASNQLIQKKLADMATEISIGLQACLQVGRLKDEGR-------HCPDMVSMIKR 307

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             C  A  +  ++ + +GG+G  +E  I RH
Sbjct: 308 NSCGKALDIARQSRDMLGGNGICDEYHIIRH 338


>gi|260169|gb|AAB24226.1| glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, 438 aa]
 gi|2316112|gb|AAC52079.1| glutaryl-CoA dehydrogenase [Homo sapiens]
          Length = 438

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|13474528|ref|NP_106097.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025282|dbj|BAB51883.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 31/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E R G+D+A       +  D  Y L+G K W  +  ++D +I+ A+     G   +
Sbjct: 125 FALSEPRSGSDVANTEMTATRDGDS-YVLTGEKTWISNGGIADLYIVFARTGEAPGAKGL 183

Query: 259 PRLLEDGSPNGL-CYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +  G   GL   +RL+    + +   S   V L  S   G           P +  +
Sbjct: 184 SAFIVPGDVKGLGIAERLEVIAPHPLARLSFDQVRLPTSALIG----------KPGDGFR 233

Query: 314 ILIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I + +     S  G       R +L E+I     R + G  + +  +++  IAD+ALDI 
Sbjct: 234 IAMSVLDVFRSTVGAAALGFARRALDESIKRVAERKLFGAPMAELQMVQGHIADMALDID 293

Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L +R A + D   +R + EAA A++ A          A  VI +A++  GG G  +
Sbjct: 294 AAALLVYRAAWTKDMGAARVTREAAMAKLFA-------TDKAQDVIDKAVQLHGGDGVRK 346

Query: 427 ERSIARHYRESPANSILLGSGN 448
              +   YRE  A  I  G+ +
Sbjct: 347 GHIVESLYREIRALRIYEGASD 368


>gi|126440337|ref|YP_001057574.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|134279449|ref|ZP_01766161.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|126219830|gb|ABN83336.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|134248649|gb|EBA48731.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 623

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|332187490|ref|ZP_08389227.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332012419|gb|EGI54487.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 391

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 33/247 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + +  +K+  G Y LSG K W  ++P++D F++ A+ E   G  + 
Sbjct: 134 FGLTEPDAGSDPGGMRTTAKKVEGG-YVLSGAKTWISNAPIADVFVIWAKSEAHGGA-IR 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP------VEDM 312
             +LE G   GL   +++NK+  R++ T         G ++ D  V+ G       VE +
Sbjct: 192 GFVLEKGV-KGLSAPKIENKLSLRASIT---------GMVMMD-EVAVGEEALLPHVEGL 240

Query: 313 K-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDI 366
           K     L+ A   +S   +  AE   +A R++       D+P     + ++ +AD+  +I
Sbjct: 241 KGPFGCLNRARYGISWGALGAAEFCFHAARQYGLDRKQFDRPLAATQLYQKKLADMETEI 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A     S R+    DE +       +A  M  I K      A  +   + +  GG+G   
Sbjct: 301 ALGLQASLRVGRLMDEGR-------FAPEMISIVKRNNVGKALDIARASRDMHGGNGISG 353

Query: 427 ERSIARH 433
           E  + RH
Sbjct: 354 EYQVMRH 360


>gi|149635580|ref|XP_001510278.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase
           [Ornithorhynchus anatinus]
          Length = 489

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D  ++ ++ +  S +  + L+G K W  ++P++D F++ A+ E G+V  F
Sbjct: 228 FGLTEPNHGSDPGSMETRARHNSANKTFTLNGSKTWITNAPVADLFVVWAKCEDGKVRGF 287

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L    LE G   GL   +++ K   R++ T       VE+   N    LL +++   GP 
Sbjct: 288 L----LEKGM-KGLSAPKIEGKFALRASVTGMILMEDVEVPEEN----LLPNVSGLAGPF 338

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             +    +   A  ++      L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 339 GCLNTARF-GIAWGALGAAEFCLHTARQYALDRIQFGVPLARNQLIQKKLADMLTEITIG 397

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 398 LQACLQLGRLKDKDKATPE-------MVSMLKRNSCGKALEIARQARDMLGGNGISDEYH 450

Query: 430 IARH 433
           + RH
Sbjct: 451 VIRH 454


>gi|47086169|ref|NP_998100.1| acyl-CoA dehydrogenase-like [Danio rerio]
 gi|45709336|gb|AAH67617.1| Zgc:85777 [Danio rerio]
 gi|148725455|emb|CAN88156.1| novel protein (zgc:85777) [Danio rerio]
          Length = 432

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 52/286 (18%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P     V + LG++E   G+D+A+I ++  +  D      G  W  +   +D   +LA  
Sbjct: 162 PTIMGDVVVCLGVSETGAGSDVASIKTKAVRKGDEYVINGGKMWTTNGTQADWMCLLANT 221

Query: 250 EGRVGCFLVPRLLEDGSPN-------------GLCYQRLKNKIGNRSNATVELEF----- 291
                         DG P+             G+   R  NKIG  S+ T E+ F     
Sbjct: 222 -------------SDGPPHKNKSLICLPMKLPGVHIARKINKIGMHSSDTAEVFFDDVRV 268

Query: 292 --SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG----MRVSLAEAIHYARRRHVS 345
             SN  G          G     ++L + +  +  V+     M   + E I Y R+R + 
Sbjct: 269 PCSNVIG--------QEGMGFTYQMLQFQEERLWGVANILTVMEKVVQETIQYTRQRKIF 320

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++   V+   +A++ ++I    +L  R    + +    ++ A+ A++ A        
Sbjct: 321 NQPILHNQVVHFRLAELQMEIELLRSLLHRATALYIKGNDVTKLASMAKLKAG------- 373

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++A  +    ++  GG GY  +  ++R YR+S   SI  G+   M+
Sbjct: 374 RLARELADSCLQYWGGMGYTSDVLVSRFYRDSRLMSIGAGADEVML 419


>gi|71019393|ref|XP_759927.1| hypothetical protein UM03780.1 [Ustilago maydis 521]
 gi|46099582|gb|EAK84815.1| hypothetical protein UM03780.1 [Ustilago maydis 521]
          Length = 488

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 55/222 (24%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLSG 230
           W P+IFS                 I L +TE   G+++A ++++ + I +     Y ++G
Sbjct: 154 WLPEIFSGRKR-------------ICLAITEPLAGSNVANLSTEAKLIEENGKKYYLVNG 200

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           +K W  +   SD F    +  G+ G        ++PR      P G+  +++K   G  S
Sbjct: 201 NKKWITNGIYSDWFTTAVRTSGKAGESSGISLLMIPR-----GP-GVTTKQMKMLPGGAS 254

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSGMR 329
             T+ +EF         D+ V   PVE+        +K++ +      L  A  ++   R
Sbjct: 255 GTTI-VEFD--------DVKV---PVENRIGKEGDGLKLVFFNFNHERLTIAFTALRYAR 302

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           V + + I + RRR V G  LI+QPV++  I  +A ++ A  A
Sbjct: 303 VCMEDTIAHTRRREVFGKKLIEQPVVRHKIGHMAREVEALQA 344


>gi|254296040|ref|ZP_04963497.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157805947|gb|EDO83117.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
          Length = 618

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 134 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 193

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 194 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 252

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 253 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 307

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 308 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 367

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 368 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 427

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 428 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 461


>gi|126641688|ref|YP_001084672.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 347

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 140 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAA 192

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 193 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 249

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  K    EA  AR++       C
Sbjct: 250 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARLL-------C 302

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 303 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 341


>gi|304391269|ref|ZP_07373213.1| glutaryl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303296625|gb|EFL90981.1| glutaryl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 417

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 25/275 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++ + ++ G Y LSG K W  +SP++D  ++ A+++   G  + 
Sbjct: 158 FGLTEPDHGSDAGGMLTRAKPVAGG-YSLSGAKNWITNSPIADVMVVWAKLDDGNGDKIR 216

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ K   R++ T  ++    F     LL  ++   GP       
Sbjct: 217 GFILERGM-KGLETPKIEGKFSLRASVTGMIQMDEVFVPEANLLPHVSGLAGP------F 269

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE   +A R     R   G  L    ++++ +AD+  +I+   
Sbjct: 270 GCLNKARYGISWGAMGAAEFCWHAARTYTLERKQFGRPLAQTQLIQKKLADMQTEISLGL 329

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S RL    D      + AA   +++ + +  C K A  V   A +  GG+G  +E  +
Sbjct: 330 QGSLRLGRLID------DHAAPVELISLMKRNNCGK-ALDVARNARDMHGGNGVSDEYGV 382

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            RH     A +   G+ +   L +L   + G   F
Sbjct: 383 IRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 416


>gi|296283350|ref|ZP_06861348.1| acyl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 381

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D A + +Q   + DG  Y L+G K F+S   ++D ++ + +  G      + 
Sbjct: 126 LTEPGSGSDAAGLKTQA--VLDGDHYVLNGTKQFISGGGVNDVYVTMVRT-GEHKTKGIT 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTG 307
            L+ D    G+ +   + K+G  ++ T ++ F +              GF    + +  G
Sbjct: 183 CLVVDKDTPGVSFGAPEKKLGWNASPTAQVIFEDARVPVENRVGDEGEGFRFAMMGLDGG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     L+    S+ G +  L EA+ Y + R      + D    +  +AD+A D+ 
Sbjct: 243 ---------RLNIGACSLGGAQRCLDEAVKYTKERQQFDQQIADFQNTQFMLADMATDLE 293

Query: 368 AATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA AL +  A    D A  +S  +A A+ +A             V+ +A++  GG GY++
Sbjct: 294 AARALLYLAAAKVTDNAPDKSRFSAMAKRLA-------TDNGSKVVNDALQLFGGYGYLK 346

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  I R++R+   +SIL G+   M
Sbjct: 347 DYPIERYWRDLRVHSILEGTNQVM 370


>gi|41409749|ref|NP_962585.1| FadE3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398581|gb|AAS06201.1| FadE3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 405

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 41/310 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++ L  T    + + P++ S E   T             + LTE  GG+D+
Sbjct: 106 MGGHTVVAKLLTLFGTEDQKRAYLPRMASGEIRAT-------------MALTEPGGGSDL 152

Query: 212 AAITSQG--QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLE 263
             +++       SDG+       W  ++  S    +L + + +      PR      LL 
Sbjct: 153 QNMSTTALPDPDSDGLVVNGAKTWISNARRSGLIALLCKTDPKA----TPRHKGISILLV 208

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--L 318
           +  P GL   R   K+G +   + EL F N       +LG +    G  + MK L    +
Sbjct: 209 EHGP-GLTVSRDLPKLGYKGVESCELSFGNFRAPATAVLGGV-AGQGFSQMMKGLETGRI 266

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A 
Sbjct: 267 QVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAE 326

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +    EA  A++ A        ++A  +   A+   GG GY +E  + R++R++P
Sbjct: 327 RYDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAP 379

Query: 439 ANSILLGSGN 448
              +++G G 
Sbjct: 380 L--MIVGEGT 387


>gi|167838955|ref|ZP_02465732.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 1285

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 16/273 (5%)

Query: 202  LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G++  AI S  Q+I    + +SG K W  SS  +    + A+     G  +V  
Sbjct: 753  LTEPDAGSNARAIVSTAQRIDGDHWLVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 810

Query: 261  LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317
             +  G+P GL        +G R     T+ L+ +  +    LG         +       
Sbjct: 811  AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGAPGQGMAVAQQTMNFAR 869

Query: 318  LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L    + V  M+   A+ +H YA RR +  G+L+D P+ ++ + D+   I   +AL  +L
Sbjct: 870  LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRLGDLRHRIDGLSALIEQL 928

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  FD  +   E+     ++A I    C         E M+ +GG GYIE     + +R+
Sbjct: 929  AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQIFRD 982

Query: 437  SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
            +    I  G    ++  + + LL  G +L   L
Sbjct: 983  ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1015


>gi|121609885|ref|YP_997692.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554525|gb|ABM58674.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 379

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 130/314 (41%), Gaps = 40/314 (12%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG  +   + +  +V L T  +  K W P I   E         Q  +VAI    TE  G
Sbjct: 87  AGFSLHSDIIAPYIVRLGTEAQKQK-WLPGICRGE---------QILAVAI----TEPGG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ A+ +   +  D  Y + G K F+S+ ++ D  +++ +     G   V  ++ +  
Sbjct: 133 GSDVKAMRTTAVRDGDE-YVIDGSKIFISNGLNCDMVLLVCKTSPAAGAKGVSLIMVEAD 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV------EDMKILIY 317
             G    R  +K+G  +  T EL F N       LLG  N     +      E + I +Y
Sbjct: 192 RAGFRRGRKLDKVGQPAADTAELFFDNLRVPVANLLGQENQGFAYLMQELAQERLIIALY 251

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI-ALDIAAATALSFRL 376
              A+  + G+       + Y ++R      + D    K  +AD+ A  +A  T + + L
Sbjct: 252 AAVALERLLGL------TLEYVKQRRAFEQTVWDFQNTKFKLADVKAQSVAVRTMVDYYL 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                  K   +EAA A++ A     W C      + + ++  GG GY+ E  IAR + +
Sbjct: 306 GEHLRR-KLSVQEAAIAKMYAT-EALWKC------LDDMVQLHGGYGYMLEYPIARAFAD 357

Query: 437 SPANSILLGSGNAM 450
              + ++ G+   M
Sbjct: 358 YRVSRVVGGANEVM 371


>gi|308272369|emb|CBX28974.1| Acyl-CoA dehydrogenase [uncultured Desulfobacterium sp.]
          Length = 382

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFL 257
           LTE   GTD   + +    + DG  Y ++G K F+++     S     ++  E +     
Sbjct: 125 LTEANAGTDAGGVETTA--VEDGEDYVINGTKIFVTNGGICGSALIFAISDSENQRSSNS 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
           V  ++E  +P G     +++  G R+N    L F +     +   N+     + +KI L 
Sbjct: 183 V-LIVEKNTP-GFSVGEIEDLCGMRANPVSSLFFEDC---RVPKSNLLGRKGDGLKIGLS 237

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LDS  + ++   + +A+A     + Y++ R      L     ++  +AD+A +I AA  
Sbjct: 238 TLDSGRIGIAAQALGIAQAAFEDALKYSKERQQFKKPLSTFQTIQNYLADMATEIDAARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R     D  K+   EAA A++       +C   A  V   A++  GG GY +E  + 
Sbjct: 298 LLYRACAIKDAGKAFGAEAAMAKL-------YCSTTASRVTGLAVQIHGGYGYSKEYDVE 350

Query: 432 RHYRESPANSILLGS 446
           R++R++    I  G+
Sbjct: 351 RYFRDAKVTEIYEGT 365


>gi|293611433|ref|ZP_06693728.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826217|gb|EFF84587.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 385

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+AAI +  +K  D  Y ++G K W  +S  +D F +LA           
Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++      G+ +    NK+G RS  T ++   N       L+G   +           
Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +   ++ G++  + + I+Y + R      LI+   +    A++  ++ A  AL+++
Sbjct: 242 ERLWACANAIGGLQHCIQQTINYTKERTTFDQPLINNQYIHFRFAELMTEVEALKALTYQ 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  +  A+ A++ A        ++   V    ++  GG+G++ +   ++ YR
Sbjct: 302 ACEQHIAGEDVTMLASMAKLKAG-------RLTREVADSCVQYWGGNGFMWDNPASQLYR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +    SI  G+   M+  +  L++
Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378


>gi|228968471|ref|ZP_04129459.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228791177|gb|EEM38791.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 241

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 33/236 (13%)

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F+++   +  +I+ A      G   +   + +    GL   + ++K+G   +
Sbjct: 12  YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLLGS 71

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDM--------KI-LIYLDSAIMSVSGMRVSLAEA 335
            TV+L F         D+ V   P E++        K+ +  LD   + +    + +AEA
Sbjct: 72  RTVQLTFE--------DMKV---PAENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEA 120

Query: 336 -----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                I YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +EA
Sbjct: 121 ALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEA 180

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +       I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+
Sbjct: 181 S-------IAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGT 229


>gi|226199555|ref|ZP_03795112.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225928436|gb|EEH24466.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 618

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 134 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 193

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 194 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 252

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 253 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 307

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 308 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 367

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 368 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 427

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 428 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 461


>gi|322500597|emb|CBZ35674.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 629

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 55/363 (15%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++A    G  M   ++  +   LM+  +  +   + PK+ S E+  T             
Sbjct: 144 MIATANWGFSMYSGLSLGACRTLMSWASDELKDQYLPKLVSGEWSGT------------- 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253
           + LTE + GTD++ + ++ +   DG  Y ++G K F+S+    ++D  I  +LA++   +
Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSL 250

Query: 254 ------GCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   FLVPR +  +DGS     N  C   L+ K+G + ++T +L F N+ G+L+G+
Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEAAKNVECIA-LEKKMGIKGSSTCQLSFHNSVGYLIGE 309

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVMKRA 358
            +     +        +  A+  V    ++    + YAR R      GG    + V  R 
Sbjct: 310 PSAGMKQMFTFMNAARVGCALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRI 369

Query: 359 I--ADIALDIAAATALS-------FRLANSFDEAKSRSEEAAYARI------MAPITKYW 403
           I  A++  ++  A A++         +    D   +  + A    +        PI K  
Sbjct: 370 ICHANVRQNVLFAKAIAEGGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKAC 429

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460
             +      +  ++  GG GYI+   + +  R+S   +I  G+     LD +    L  K
Sbjct: 430 VTEWGVEAASRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTK 489

Query: 461 GTN 463
           G N
Sbjct: 490 GGN 492


>gi|317157991|ref|XP_001826708.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 441

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 35/303 (11%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQV 249
           ++T +AI    TE   G+D+A IT+   K +DG  Y ++G  KW  +   SD   M  + 
Sbjct: 157 KRTCIAI----TEPEAGSDVANITTTATKSADGKFYIINGAKKWITNGIWSDYTTMAVRT 212

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G     L   ++      G+  +R+    G ++  T  +E  +     +G+L    G  
Sbjct: 213 GGPGASGLSVMVVPLKGYPGVTMRRIHVS-GTKTAGTTYIELDDV-KVPVGNLIGREG-- 268

Query: 310 EDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + M+ ++       L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A   
Sbjct: 269 DGMRTIMTNFNHERLTIAVQCTRQARVALSSAFGYCLKREAFGKTLMDQPVVRHRLAKAG 328

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC----I 419
            ++   +A   ++         + E+    R++  +T     K A  V+ E  +C     
Sbjct: 329 AELETVSAWIEQILYQL----CKLEKVEADRLLGGVTALAKAKAA-MVLNECAQCAVLLF 383

Query: 420 GGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           GG+G  +      +    R+ P + I  GS + + LD+L           +++ T E+ L
Sbjct: 384 GGAGLTQSGQGEIVEAIMRDVPVSRIPGGSEDVL-LDLL------VRQLVKIYQTQEKKL 436

Query: 477 GSS 479
           G +
Sbjct: 437 GQA 439


>gi|302900153|ref|XP_003048205.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729137|gb|EEU42492.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 546

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 114/276 (41%), Gaps = 40/276 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRV 253
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +    D F    +    G  
Sbjct: 271 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWCDYFTTAVRTGENGMN 330

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV- 309
           G  L+  L+E G   G+  +R+ N  G  S+ T  + F +       LLG  N     + 
Sbjct: 331 GVSLL--LIERGE--GVTTRRM-NCQGVHSSGTTYITFEDVKVPVENLLGKENKGFRVIM 385

Query: 310 -----EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                E M I+I       S+   RV   E++ YA +R   G  LI+ PV++  +A +A 
Sbjct: 386 TNFNHERMGIII------QSLRFSRVCYEESVKYANKRRTFGKKLIEHPVIRMKLAHMAR 439

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEA 415
            I A+      L N   + +   E  A  R+  PI         T  +C + A  +    
Sbjct: 440 QIEASYNW---LENLIYQCERMGETEAMLRLGGPIAGLKAQSTLTFEFCAREASQIFGGL 496

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               GG G      + R YR+  A +I  GS   M+
Sbjct: 497 SYSRGGQG----AKVERLYRDVRAYAIPGGSEEIML 528


>gi|159125110|gb|EDP50227.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 541

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGG-PGM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  
Sbjct: 324 NGISVLLIEREAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGF 376

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I
Sbjct: 377 KVIMTNFNHERIGIVIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQI 436

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAME 417
            A       L N   + +S  E  A  ++          A  T  +C + A  +      
Sbjct: 437 EATYNW---LENIIYQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSY 493

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG G      + R YR+  A +I  GS   M+
Sbjct: 494 SRGGQG----GKVERLYRDVRAYAIPGGSEEIML 523


>gi|318057637|ref|ZP_07976360.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318081101|ref|ZP_07988433.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 390

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQK 220
           + L  T    ++W P++ + E             +    GLTE   G+D     T+    
Sbjct: 100 IHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVLD 146

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 147 EATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISAIIVP----SGTP-GFT 201

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+L          + L  LD   ++++ +
Sbjct: 202 VAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGYA-----QFLRILDEGRVAIAAL 256

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD+ L      A + RL  S+ +A
Sbjct: 257 ATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMEL-----RAHTARL--SWRDA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     +A +  GG G++ E  +AR +R+  A  + 
Sbjct: 310 ASRLVRGEAFKKEAALAKLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILE 367

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 368 IGEGTSEVQRMLIARELG 385


>gi|229489257|ref|ZP_04383123.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324761|gb|EEN90516.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 385

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 51/277 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251
           + +TE   G+D+A I +  +   DG  Y ++G K F++   ++D  +++ +         
Sbjct: 124 IAMTEPGTGSDLANIATTAKLSEDGTHYVVNGSKTFITGGVLADRVLVVCRTAPSTAENR 183

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R G  +   L+ D S  G    R  NKIG +++ T EL F         D+ V   PVED
Sbjct: 184 RTGLSI---LVIDTSSPGYSVGRKINKIGLKTSDTAELSFV--------DVKV---PVED 229

Query: 312 M------------------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                              ++ I   +A  + + +R     AI Y + R V G  +    
Sbjct: 230 RLGEEGDGFSYLTHNLAQERLTIAFGAAATASAALRF----AIDYVKDRKVFGKPVAAFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             K  +A+ A ++ A   +S       D       +AA A++       +C + A  VI 
Sbjct: 286 NTKFVLAECATEVDAIQLVSDNALECHDRGTLTIPDAAKAKL-------FCTEAAGRVID 338

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + ++  GG GYI E  IAR Y ++    I  G+   M
Sbjct: 339 KCLQLHGGYGYITEYPIARLYADTRVTRIYGGTSEVM 375


>gi|284031611|ref|YP_003381542.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810904|gb|ADB32743.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 380

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +   +  D  Y L+G K F+S+  ++D  I++A+ +   G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAVRDGDQ-YVLNGQKTFISNGILADLVIVVAKTDPEAGYQGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R  +KIG ++  T EL F +       LLG+     G V  M+ L
Sbjct: 183 SLLVVERGMAGFERGRNLDKIGLKAQDTAELFFDDVRVPAANLLGEQG--QGFVYLMEKL 240

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A+++ +     L   + Y + R   G  +      +  +A++A +   A    
Sbjct: 241 PQERLTIAVVAAAACENVLESTLQYVKDRKAFGRPIGSFQNSRFVLAELATETQIARVFV 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R             EAA A       K+W  ++   V+   ++  GG G++ E  IA+ 
Sbjct: 301 DRCIEELTAGTLTVSEAAMA-------KWWTTELQKKVVDRCLQLYGGYGFMTEYPIAKA 353

Query: 434 YRESPANSILLGSGNAM 450
           Y ++   +I  G+   M
Sbjct: 354 YLDTRVQTIDGGTTEIM 370


>gi|241661759|ref|YP_002980119.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863786|gb|ACS61447.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 393

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  Y L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAELKGD-RYVLNGTKMWITNGPDCDVLVVYAKTEPELGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F N       +LG  N  T      K+L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFENVEVPVENILGQENGGT------KVL 241

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     +SG  + + +A       Y   R   G  + +  +++  +AD+   + A 
Sbjct: 242 MSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKMADMYTTLQAC 301

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +  + D +  R       +  A +  Y   + A  +  EA++ +GG+GYI E  
Sbjct: 302 RAYLYTVGKNLD-SLGRDHVRQVRKDCAGVILY-TAEKATWMAGEAIQILGGNGYINEFP 359

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 360 VGRLWRDAKLYEIGAGT 376


>gi|187927237|ref|YP_001897724.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780063|ref|ZP_07674816.1| isovaleryl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724127|gb|ACD25292.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921233|gb|EFP66877.1| isovaleryl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 393

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  Y L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAELKGD-RYVLNGTKMWITNGPDCDVLVVYAKTEPELGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F N       +LG  N  T      K+L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFENVEVPVENILGQENGGT------KVL 241

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD     +SG  + + +A       Y   R   G  + +  +++  +AD+   + A 
Sbjct: 242 MSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKMADMYTTLQAC 301

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +  + D +  R       +  A +  Y   + A  +  EA++ +GG+GYI E  
Sbjct: 302 RAYLYTVGKNLD-SLGRDHVRQVRKDCAGVILY-TAEKATWMAGEAIQILGGNGYINEFP 359

Query: 430 IARHYRESPANSILLGS 446
           + R +R++    I  G+
Sbjct: 360 VGRLWRDAKLYEIGAGT 376


>gi|30584841|gb|AAP36673.1| Homo sapiens glutaryl-Coenzyme A dehydrogenase [synthetic
           construct]
 gi|61371916|gb|AAX43755.1| glutaryl-Coenzyme A dehydrogenase [synthetic construct]
 gi|61371921|gb|AAX43756.1| glutaryl-Coenzyme A dehydrogenase [synthetic construct]
          Length = 439

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|4503943|ref|NP_000150.1| glutaryl-CoA dehydrogenase, mitochondrial isoform a precursor [Homo
           sapiens]
 gi|2492631|sp|Q92947|GCDH_HUMAN RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|1549327|gb|AAB08455.1| glutaryl-CoA dehydrogenase [Homo sapiens]
 gi|1905909|gb|AAB51174.1| glutaryl Co-A dehydrogenase [Homo sapiens]
 gi|12803505|gb|AAH02579.1| Glutaryl-Coenzyme A dehydrogenase [Homo sapiens]
 gi|30582251|gb|AAP35352.1| glutaryl-Coenzyme A dehydrogenase [Homo sapiens]
 gi|60655133|gb|AAX32130.1| glutaryl-coenzyme A dehydrogenase [synthetic construct]
 gi|60655135|gb|AAX32131.1| glutaryl-coenzyme A dehydrogenase [synthetic construct]
 gi|119604730|gb|EAW84324.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|119604732|gb|EAW84326.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|158261837|dbj|BAF83096.1| unnamed protein product [Homo sapiens]
          Length = 438

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|126464656|ref|YP_001045769.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126106467|gb|ABN78997.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 377

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 34/311 (10%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+ T   VH      I  R   P  +     P  + +      LTE   G+D +A+ S+ 
Sbjct: 81  AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRA 140

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
           ++ + G Y + G K F++S  ++   ++ A++EG  G     CFL P      +P G   
Sbjct: 141 RR-AGGDYVIDGEKVFITSGRLAGWAVLFARMEGSTGKEGITCFLTP----TDTP-GYEV 194

Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            ++++K+G  ++ T  L F +         G       ++   +E  +I I    A  SV
Sbjct: 195 VKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETGRIGI----AAQSV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YAR R   G  LI+   +   +A+    + AA  +    A   D  + 
Sbjct: 251 GMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDTGQP 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA A++ A        + A  ++++A++  GG GY  +  + R YR+     I  G
Sbjct: 311 CLTEAAMAKLFA-------SEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEG 363

Query: 446 SGNAMVLDVLN 456
           + +   + +L 
Sbjct: 364 TSDIQKMLILR 374


>gi|154304853|ref|XP_001552830.1| hypothetical protein BC1G_09012 [Botryotinia fuckeliana B05.10]
 gi|150853874|gb|EDN29066.1| hypothetical protein BC1G_09012 [Botryotinia fuckeliana B05.10]
          Length = 511

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 52/339 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A I +  +K  DG  Y ++G  KW  +    D F+   + +  +  
Sbjct: 197 ICLAITEAFAGSDVAGIRTTAEKTKDGKHYIVNGTKKWITNGVFCDYFVTGVKTDKGLSV 256

Query: 256 FLVPR--------LLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            L+ R        +    SP  G  Y    N         V++   N  G          
Sbjct: 257 VLIERGEGVETTPIKTSYSPTAGTAYVTFDN---------VKVPVENLLG---------- 297

Query: 307 GPVEDMKILIYLDS----AIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             VE+  I + L +      M  SG    MR++  E I ++ +R V G  L DQPV+++ 
Sbjct: 298 --VENKGIHVILSNFNHERWMMASGVTRMMRLATEECIKWSNQRLVFGKKLTDQPVIRQK 355

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAM 416
           +A +   I+   A    L N   +      +     +  PI   K +  + A     EA+
Sbjct: 356 LAKM---ISHCEATQAWLENITYQMTLMPYKQQATHLAGPIGLLKMFATRSAHECADEAV 412

Query: 417 ECIGGSGYIEE---RSIARHYRESPANSILLGS----GNAMVLDVLNLLEKGTNLFEQLF 469
           +  GG    +    R+I   +R    ++IL G+    G+  V   L  + K   +  + F
Sbjct: 413 QIFGGRALTQSGMGRTIEMFHRTYKFDAILGGAEEVLGDLGVRQALKNMPKSLGIGHKGF 472

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
                 L  +G K +  +R  ++  +  + L  +LT  I
Sbjct: 473 PLRIHPLIPAGSKTVYAVRTHLNRGRRLRNLLNYLTNVI 511


>gi|148358690|ref|YP_001249897.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|296108221|ref|YP_003619922.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148280463|gb|ABQ54551.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|295650123|gb|ADG25970.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 382

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 45/305 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A++ +  +KI  G + L+G K W  +
Sbjct: 104 FGSEEQKKRYLPEMAAGNIIGCFGLTEPDSGSDPASMRTHAKKIEGG-WVLNGAKMWITN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +P++D  I+ A+ E  +  F+V     D    G+    +K K+  R++ T EL F N F 
Sbjct: 163 APIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLRASITGELVFDNVF- 216

Query: 297 FLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE------------AIHYAR 340
                       V D  +L      L +A+  +S  R  +A             A +Y  
Sbjct: 217 ------------VPDENLLPKSEKGLGAALSCLSQARYGIAWGAMGAAMACFDIARNYLL 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M  + 
Sbjct: 265 ERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMISLA 317

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L VL     
Sbjct: 318 KGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLGRHIT 376

Query: 461 GTNLF 465
           G N F
Sbjct: 377 GINAF 381


>gi|91780857|ref|YP_556064.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693517|gb|ABE36714.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 385

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 27/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV------ 253
           L ++E   G+D+AA+T++     DG        W   +  +D  +++A+   RV      
Sbjct: 119 LAMSEPNAGSDVAALTTRAIPDGDGWRITGSKCWCTFADGADYIVVIART-ARVTDVARR 177

Query: 254 ----GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 FL+  PR      P G+    +  KIG     T EL F + +     L+G+   
Sbjct: 178 HQGLSAFLIEKPR---GALPAGVIGSPMP-KIGYYGWKTWELSFDDVYVGPETLIGEPGR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   V          +A  S+   + +L +A+ YA +R   G  + D   ++  +AD+A 
Sbjct: 234 AFYYVAHGLETARAHTAARSIGLAQGALEDALDYATQRVQFGHPIGDFQALRFRLADMAT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A  L   +    D      +EAA A       KY+  +++  V ++A++  GG+GY
Sbjct: 294 RVETARQLLRSVCEQIDSGVRCEKEAAMA-------KYYAAEISETVTSDALQIHGGAGY 346

Query: 425 IEERSIARHYRESPANSILLGS 446
               ++ R++R++    I  G+
Sbjct: 347 TTHFAVERYWRDARLTKIFEGT 368


>gi|289618828|emb|CBI54653.1| unnamed protein product [Sordaria macrospora]
          Length = 519

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 32/265 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A + +   K +DG  Y ++G  KW  +   SD F+   + E  +  
Sbjct: 250 ICLAITEAFAGSDVAGLRTTATKTADGKHYIVNGTKKWITNGVFSDYFVTGVKTEKGLSV 309

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+ R        G+  + +K    + +  T  + F N       LLG+        E+ 
Sbjct: 310 LLIER------GEGVETKPIKTSY-SPAAGTTYITFDNVKVPVENLLGE--------ENK 354

Query: 313 KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            I + L +        A  ++  MR+ + E++ +A +R V G  LIDQPV+++ +A +  
Sbjct: 355 GIYVILSNFNHERWMMACATIRYMRLVVEESLKWAHQRLVFGKRLIDQPVIRQKLAKMIA 414

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              A  +    +    +     SE+A +      + K  C + A  +  E+++  GG G 
Sbjct: 415 LCEAHQSWLETITYQMNHM-PYSEQAKHLGGPIALLKMSCTRAAHEIADESVQIWGGRGL 473

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    R I    R    ++IL G+
Sbjct: 474 TQTGMGRVIENFNRGYKFDAILGGA 498


>gi|282865016|ref|ZP_06274069.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559939|gb|EFB65488.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 388

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 37/280 (13%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
            GLTE  GG+D     T+     + G + ++G K F+++  +D    + +  V GR    
Sbjct: 125 FGLTEPDGGSDAGGTRTTAVLDEAAGEWVINGSKCFITNSGTDITELVTVTAVTGRKENG 184

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
              +   +VP     G+P G       +K+G  ++ T EL FS+       LLG+     
Sbjct: 185 APRISAIIVP----SGTP-GFTVAAPYSKVGWNASDTRELSFSDVRVPAANLLGEEG--R 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G  + ++IL   D   +++S +   LA     E++ YA  RH  G  +     ++  IAD
Sbjct: 238 GYAQFLRIL---DEGRIAISALSTGLAQGCVDESVKYAAERHAFGKPIGANQAIQFKIAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +    A          + +A SR       +  A I K +   +A     EA +  GG
Sbjct: 295 MEMRAHMARV-------GWRDAASRLVAGEPFKKEAAIAKLYSSTVAVDNAREATQIHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            G++ E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 348 YGFMNEYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 385


>gi|332525157|ref|ZP_08401334.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108443|gb|EGJ09667.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 376

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ + ++     LTE + G++ + + +  ++  D  Y + G K F++S  + D  I++A 
Sbjct: 111 PLARGAMLGAFCLTEPQVGSEASGLKTTARRDGDD-YVIDGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +   G      FLVP      S  G    RL++K+G  ++ T ++ F       ++  G
Sbjct: 170 TDKDAGKKGFSAFLVPT-----STPGYVVARLEDKMGQHASDTAQIVFEGCRVPAAHRIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L V+   +E  +I I    A   V   R +   A  YA+ R   G  + +   ++
Sbjct: 225 AEGEGLKVALSGLEGGRIGI----ASQCVGMARAAFEAATAYAKERVAFGKPIFEHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD A  I AA  L    A   D  +   +EAA A++ A        +MA  V + A+
Sbjct: 281 FRLADAATQIEAARQLVHHAAALKDAGQPCLKEAAMAKLFAS-------EMAERVCSTAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QTFGGYGYVNDFPVERLYRDVRVCQIYEGTSD 365


>gi|330985307|gb|EGH83410.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 387

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ + +     +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F N         G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDNVEVPEENLLGVLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|331011699|gb|EGH91755.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 333

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 18/158 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA+++      
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYKITGSKIFITGGEHDLTENIIHLVLAKLQDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F +  G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRR 342
              +  M     L   I  + SG+R S   A+ YA+ R
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYAQDR 322


>gi|327260753|ref|XP_003215198.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 362

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 45/283 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  MSD  I++
Sbjct: 91  PQMVAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMSDLVIVV 148

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294
           A    E R     +   L +    G    R   KIG ++  T EL F +           
Sbjct: 149 AVTNREARSPAHGISLFLVENGMKGFIKGRKLEKIGLKAQDTAELFFEDVRLPASALLGQ 208

Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               F +L+ +L     P E + I      A M+++       E  +Y ++R   G  + 
Sbjct: 209 ENKGFYYLMAEL-----PQERLLI------ADMAIASCEFMFEETRNYVKQRKAFGKTIA 257

Query: 351 DQPVMKRAIADIALDIAAATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
               ++  +A++  +I    A      RL      +  R + A      A + KYW   +
Sbjct: 258 HLQTVQHKLAELKTEICVGRAFLDHCLRL-----HSGKRLDSAT-----ASMAKYWASDL 307

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              V  + ++  GG GY+ E  IA+ + +S    I  G+   M
Sbjct: 308 QNNVATQCVQLHGGWGYMWEYPIAKCFVDSRVQPIYGGTNEIM 350


>gi|300783006|ref|YP_003763297.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792520|gb|ADJ42895.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 398

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ +K  DG Y + G K +L++  S   I  ++   EG       +
Sbjct: 129 MSEPDLGSDVAAIKTKAKKTDDG-YVIDGSKMWLTNGGSSNLIALLVKTDEGAEKPHQNL 187

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-DLNVSTGPVE 310
             FLV  P    + +P GL      +K+G +   T E  F    G+ +G D+ +   P +
Sbjct: 188 TTFLVEKPEGFGEVAP-GLTIPGKIDKMGYKGVDTTEAVFD---GYKIGADMVLGEAPGK 243

Query: 311 DMKILI-YLDSAIMSVS----GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++  ++   ++V+    G+ +   E A+ YA++R   G  + +   +   +A++A 
Sbjct: 244 GFAYMMDGVEVGRVNVAARACGIAIRAFELAVEYAQQRKTFGKAIAEHQAVAFKLAEMAT 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D       EA  A+++A     +C +    V  ++    GG GY
Sbjct: 304 KVEAAHLMMVNAARLKDSGARNDVEAGMAKLIA---SEYCAE----VTQDSFRIHGGYGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 357 SKEYEIERLMREAP--FLLIGEGTSEI 381


>gi|288932298|ref|YP_003436358.1| acyl-CoA dehydrogenase [Ferroglobus placidus DSM 10642]
 gi|288894546|gb|ADC66083.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 390

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 15/262 (5%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K    +G+  TE   G+D A+I ++  +  D  + L+G K F+S+     FI++      
Sbjct: 118 KGDAIMGMANTEPDAGSDAASIKTRAVRDGDE-WVLNGTKQFISNGSIADFILVTARTSE 176

Query: 253 VGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
              F      +   + +    G    ++  K+G R+  T E+  +N       L+G+   
Sbjct: 177 PKSFEERHKGISYFIVETDREGYKATKITGKMGIRATDTAEVSLNNVRVPAENLVGEEGK 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +   +  +  A  +V   R +L   + Y ++R   G  L     ++  IA++A 
Sbjct: 237 GFYYMMEFFDITRVWVAAQAVGIARGALKLVVDYVKQRKAFGMPLAAFQYVQFKIAELAT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L++R A        + E       ++ + K++  ++A      A++  GG GY
Sbjct: 297 KIEAARTLTYRAA------AVQVETGKPDNTLSAMAKWYAGEVAVETCNWALQFHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I+E  I + YR++    I  G+
Sbjct: 351 IDEYPINQFYRDAKITEIYEGA 372


>gi|229161984|ref|ZP_04289960.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           R309803]
 gi|228621465|gb|EEK78315.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           R309803]
          Length = 382

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 39/244 (15%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G K     + ++G K F + +P+ D FI+ A ++GR  VG F++PR  
Sbjct: 136 RGGKPETEAIQKGDK-----WVINGRKTFTTMAPVLDYFIISASIKGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTQGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +++ +  + ++       V  AE+       H S  +L   P ++R + ++ L++  A  
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARV 296

Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             +++A  +DEA+ + S +A  A +     KY     A +++ +AM  +G     E+  +
Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPL 351

Query: 431 ARHY 434
            R+Y
Sbjct: 352 HRYY 355


>gi|256378403|ref|YP_003102063.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255922706|gb|ACU38217.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 380

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC-- 255
           ++E   G+D+ A+T +  K+ DG Y ++G K W  ++  +D  +++A+    EG+ G   
Sbjct: 126 MSEPGAGSDVGALTCRADKV-DGGYVINGQKTWCSNAHFADHVLLIARTSRDEGKHGGLT 184

Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MK 313
            F+VP         GL    ++   G   N   +L F++ F   L D  V   P +   +
Sbjct: 185 QFMVP-----ADAEGLRISGIETMGGREVN---DLYFTDCF---LPDSAVVGVPGQGWAQ 233

Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  L+   M ++ + + +A     + + Y R+R   G  +     +K  IAD+A+++  
Sbjct: 234 LMAGLNLERMILAALMLGVARRAFDDTLAYVRQREQFGRPIGSFQALKHRIADMAVELEC 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L   +A + D    +     +AR  A + K  C ++A     E M+ +GG GY  E 
Sbjct: 294 ARLLLDDVAATIDANPGK----VFAR-EASMAKLKCTELAKHFALEGMQMLGGYGYATEY 348

Query: 429 SIARHYRESPANSILLGS 446
            +    R +  +++  G+
Sbjct: 349 GMESLLRSAVVSTVYGGT 366


>gi|167822607|ref|ZP_02454078.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
          Length = 623

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|161520015|ref|YP_001583442.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353803|ref|YP_001949430.1| isovaleryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|160344065|gb|ABX17150.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337825|dbj|BAG46894.1| isovaleryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
          Length = 393

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVDAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|311743189|ref|ZP_07716997.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313869|gb|EFQ83778.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 388

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 38/276 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G GLTE   G+D  A  ++  +  D  + ++G K F+++  +D    +  V  R G    
Sbjct: 122 GFGLTEPGAGSDAGATRTRAARDGDD-WVVNGSKQFITNSGTD-ITSVVTVTARTG---- 175

Query: 259 PRLLEDGSPN-----------GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
                DG P            G   +   +K+G   + T  L F +   +   LLG+   
Sbjct: 176 --ERPDGRPEISAIMVPADTPGFVVEPAYDKLGWHISDTHPLSFVDARVSGDHLLGEQGR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359
                   + L  LD   +++S + V   +A     + YA  R   G  +  +  +   I
Sbjct: 234 GY-----AQFLATLDDGRVAISALSVGCIQACLDLCVQYAGERQTFGVPIGTKQGVAFPI 288

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ + A+ AL++R A      K     AA  +  A I K +  + A      A +  
Sbjct: 289 ADLAVMLEASRALTYRAAA----LKDGGAPAAAFKQAASIAKVYATESAVTATRIATQVF 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG G++EE  +AR YR+  A  + +G G + V  +L
Sbjct: 345 GGYGFMEEYPVARFYRD--AKILEIGEGTSEVQRML 378


>gi|254494954|ref|ZP_01052777.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|213690536|gb|EAQ42205.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 403

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  +  +      D  Y ++G K W  +   SD ++++AQ +   G      
Sbjct: 148 LSEPEAGSDATSQATTAIDKGDH-YVINGTKNWITNGGRSDVYLVIAQTDREKGHRGINA 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V R +E     G      ++K+G R + T  L+F++             FGF      
Sbjct: 207 FIVERGME-----GFDIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 261

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +S G        I + +  + ++     LA  + Y++ R   G  + +   +   +AD+ 
Sbjct: 262 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 312

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L  + A      K R E    A  MA   K +  K+A     EA++  GG+G
Sbjct: 313 TEIEAARMLVMKAAWQ----KDRKENYDMASAMA---KLYASKVAMEQTVEAVQIHGGNG 365

Query: 424 YIEERSIARHYRESPANSILLGS 446
           +++E  + R  R++    I  G+
Sbjct: 366 FVKEYHVERLMRDAKITQIYEGT 388


>gi|85715650|ref|ZP_01046630.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85697589|gb|EAQ35466.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 381

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 30/273 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y + G K F+S +  SD ++++ +  G  G   V  
Sbjct: 124 LTEPGAGSDAAALRTRAARDGDH-YVVDGQKQFISGAGASDIYVVMVRT-GDDGPDGVST 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
           L+ +    GL +   + K+G  +  T  + F N              GF +    +  G 
Sbjct: 182 LVVERETPGLSFGVSERKMGWNAQPTRAVIFENARVPVANRLGADGLGFRIAMAGLDGG- 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  S+ G + +L +A+ Y + R   G  L +   ++  +AD+A ++ +
Sbjct: 241 --------RLNIAACSLGGAQAALDKALGYMKERKAFGKRLDEFQALRFKVADMATELES 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A    +R A++ D       + A A ++  + K     +   V  +A++  GG GY+ E 
Sbjct: 293 ARTFLWRAASALD------RKDADATMLCAMVKRLATDVGFEVANQALQLHGGYGYLSEY 346

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            I +  R+   + IL G+   M + V   L +G
Sbjct: 347 GIEKIVRDLRVHQILEGTNEIMRVIVARKLIEG 379


>gi|302347956|ref|YP_003815594.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
 gi|302328368|gb|ADL18563.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
          Length = 399

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 120/265 (45%), Gaps = 22/265 (8%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-----VEGRVGCFL 257
           TE  GG+D+A I S+  K +D  Y ++G K F+S+     +++++       EG+    +
Sbjct: 135 TEPSGGSDVAGIQSRAVKENDH-YIINGRKVFISAAGEADYLLVSARTSPPQEGKRWWGI 193

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++E   P     Q+ +  IG R     E+   N     +   NV     E  K+++ 
Sbjct: 194 TTFVVERDWPGVKIGQQFR-VIGMRGEQPYEVVLDNV---KVPAENVVGKENEGFKVVVT 249

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             D   + ++   V +A+A     ++YA +R + G  +++  ++   +AD+ + + A+  
Sbjct: 250 TYDHTRIGIAAQAVGIAQAAFEKAVNYALQRELFGQRIVNFEMIVEKLADMYIRLEASRL 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A+  D+ +          I A + K +  + A  +  +A++  GG G   E  + 
Sbjct: 310 LTYWAASLADQGRPEY------TIAASLAKTFASESAEWIARQAVQIHGGYGVDFETGLE 363

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           R+ R++   +I  G+     L ++ 
Sbjct: 364 RYLRDAIITTIYEGTNEVQRLTIVK 388


>gi|312194623|ref|YP_004014684.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311225959|gb|ADP78814.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 399

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 24/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EG------RV 253
           ++E   G+D++AIT++  +  +  Y ++G K W  +   S     L +  EG       +
Sbjct: 129 MSEPGCGSDVSAITTRAARDGED-YVINGQKMWLTNGAQSGVVATLVKTDEGADSVYRNM 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
             FL+ +    G+  GL       K+G +   T E+   N        L G      G  
Sbjct: 188 TTFLLEKEPGFGTTGGLTIPGKLEKMGYKGVETTEMVLDNHRVPASAILGGPEKTGKGFY 247

Query: 310 EDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M  + +   +      G+ +   E AI YA++R   G  + D   +   +A++A  I 
Sbjct: 248 QMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRKTFGHPIADHQAIAFKLAEMATKIE 307

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   +    A   D  +    EA  A+ +A     +C +    V  EA    GG GY +E
Sbjct: 308 AGHLMMVNAARKKDRGERNDVEAGMAKFLA---SEYCYE----VTTEAFRIHGGYGYSKE 360

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             I R +RE+P   +L+G G + V
Sbjct: 361 YEIERLFREAP--FMLIGEGTSEV 382


>gi|145257349|ref|XP_001401697.1| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134058611|emb|CAK38595.1| unnamed protein product [Aspergillus niger]
          Length = 545

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 269 ICLAITEPDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRT-GDAGM 327

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             V  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  
Sbjct: 328 NGVSVLLIERDMGGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKEN------QGF 380

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 381 KVIMTNFNHERIGIVIQCVRFARVCYEESMKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 440

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAME 417
            A       L N   + +S  E  A  ++   I         T  +C + A  +      
Sbjct: 441 EATYNW---LENIIYQCQSMDETEAMLKLGGAIAGLKAQSTTTFEFCAREASQIFGGLSY 497

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG G      I R YR+  A +I  GS   M+
Sbjct: 498 SRGGQG----GKIERLYRDVRAYAIPGGSEEIML 527


>gi|311899543|dbj|BAJ31951.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 392

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P      A+G  GLTE   G+D A++ ++ ++  DG  + L G K W  
Sbjct: 115 FGSEEQKLRWLPELAAGQAVGCFGLTEPEAGSDPASMRTRARR--DGTDWVLDGAKAWIT 172

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +SD  ++ A  E  V  FLVPR    G+P G   + +  K+  R++ T EL F    
Sbjct: 173 NGSVSDVAVVWAATEEGVRGFLVPR----GTP-GFTARDIPGKLSLRASVTSELAFDGVR 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L ++ G    +  L      I+  +V   R     A+ YAR R   G  +    
Sbjct: 228 LPAGAMLPLARGLRAPLSSLGEARYGILWGTVGAARDCYRTAVQYARDRVQFGRPIGGFQ 287

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +  + ++AL++  A  ++ R+    DE +++S   ++ ++
Sbjct: 288 LTQAKLVEMALELEKAYLVAVRIGRLKDEGRAQSAHISFGKL 329


>gi|256159807|ref|ZP_05457547.1| glutaryl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256255062|ref|ZP_05460598.1| glutaryl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261222252|ref|ZP_05936533.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265998216|ref|ZP_06110773.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260920836|gb|EEX87489.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262552684|gb|EEZ08674.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 394

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +KI DG Y LSG K W  +SP++D F++ A+        + 
Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+   ++ T E+       +   +L +++   GP       
Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLCASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE     A  Y   R      L    + ++ +AD+  +IA   
Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+   FDE K   E       M  I K   C  A  +  +A +  GG+G   E  +
Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359

Query: 431 ARH 433
            RH
Sbjct: 360 MRH 362


>gi|239501891|ref|ZP_04661201.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 430

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y + G K   +   ++D F++ A   G+   F+V    + G    +   +    +G ++ 
Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAA 275

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I YA  R  
Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  +  +   IAD+A++I A   L    A+  +  +    EA  ARI+       C
Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGQPFHREAYLARIL-------C 385

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|17544998|ref|NP_518400.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427288|emb|CAD13807.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 393

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 28/288 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              IG L ++E   G+D+ ++  + +   D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAECRGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++  + E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338
            T EL F N       +LG+ N  T  +  M  L Y + A++S   +  M+  +     Y
Sbjct: 214 HTGELVFDNVEVPAENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  IAD+   + A  A  + +  + D A  R       +  A 
Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  Y   + A  +  EA++ +GG+GYI E    R +R++    I  G+
Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376


>gi|328542700|ref|YP_004302809.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412446|gb|ADZ69509.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 387

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 42/285 (14%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQV-------EGRV 253
           TE   G+D A   ++  + +DG + L+G K ++++P +D  +F ++  V       + + 
Sbjct: 125 TEPDAGSDTAGFKTRAVEGADGTWTLNGEKAYITNPGTDISSFTIILAVSSPKEAEKKQY 184

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPV 309
             FLVP    + +P G        K+G RS        S+T    L D  V      G  
Sbjct: 185 TLFLVP----NDTP-GYSRGEKYRKMGWRS--------SDTRPLYLDDCRVPASAIVGGA 231

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
              + +++    +A + +S   + LA+A     I YA+ R   GG L    +++  IA +
Sbjct: 232 HKGRWVLHKGYQAARLFLSACSLGLAQASLDHSIAYAKTRQAFGGSLGRLQLVQEMIAKM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL + +A  +++R A   D+ +      + A++ A  T      M       A++  GG 
Sbjct: 292 ALKVDSARLVTYRAAWKVDQGQDDLMALSMAKLHATETGSEVANM-------AIQVHGGW 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           G++++  ++R+ R++   +I  G G++ +  +L   E G ++  Q
Sbjct: 345 GFMDDCPVSRYLRDNRICTI--GDGSSQIQTLLIARECGLDVTFQ 387


>gi|312382268|gb|EFR27784.1| hypothetical protein AND_05110 [Anopheles darlingi]
          Length = 1159

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 34/272 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D  +I S+  K +DG  Y L+G K W     ++D   + AQ E         
Sbjct: 721 LTEPSSGSDAGSIRSKAVKSADGTHYVLNGSKIWISGGGLADILTVFAQTEVTDPKTGQK 780

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +V  F+V R    G  NG      +NK+G + + T E+ F +     +   NV     
Sbjct: 781 KDKVTAFIVERGF-GGVSNG----PPENKMGIKCSNTAEVYFDDV---KIPVENVLGKEG 832

Query: 310 EDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K+ +  L++    +SG     M   + +A  +A  R   G  + +   ++  +A +A
Sbjct: 833 DGFKVAMNILNNGRFGMSGTLAGTMAHCIQKAAEHATTRVQFGQKIANFGNVQEKLARMA 892

Query: 364 LDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +    + ++ + +AN+ D   K    EAA +++ A    ++ C        EA++ +GG+
Sbjct: 893 MRQYVSQSMGYMIANNMDAGHKDYHLEAAISKVFASEVAWYVCD-------EAIQILGGN 945

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G++    + +  R+     I  G+ + + L V
Sbjct: 946 GFMSASGLEKFLRDIRIYRIFEGANDILRLFV 977


>gi|290462991|gb|ADD24543.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
 gi|290561415|gb|ADD38108.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
          Length = 416

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 22/262 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D +++ ++  K  DG + ++G K W  +
Sbjct: 134 FGTEEQKNKYIPRLATGEIVGCFGLTEPNHGSDPSSMETKAVKNPDGSWTINGSKNWITN 193

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           SP++D F++ A  E  +  FL+ + +E     GL   +++ K   R++ T  +   +   
Sbjct: 194 SPIADVFMIWAATEDGIQGFLLEKGME-----GLTAPKIEGKFSLRASTTGMIFMEDV-- 246

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
            ++GD     G          L+SA   ++   +  AE     A  Y   R+     L  
Sbjct: 247 -VVGDEQRLPGVKGLRGPFSCLNSARFGIAWGVLGAAEFCLGAARQYTLDRYQFKKPLAQ 305

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD   +I         L    D  K   E       M  I K   C  +  +
Sbjct: 306 NQLIQKKLADALTEITLGLHACLHLGRLKDSGKLVPE-------MISILKRNNCGKSLDI 358

Query: 412 IAEAMECIGGSGYIEERSIARH 433
                + +GG+G  +E  I RH
Sbjct: 359 ARNCRDMLGGNGISDEYHIIRH 380


>gi|256822283|ref|YP_003146246.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795822|gb|ACV26478.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 382

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 32/261 (12%)

Query: 202 LTEKRGGTDIAAITSQG--QKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254
           LTE   G+D + + ++   +K  DG  Y ++G K F++S  + D  I+ A  +   G   
Sbjct: 123 LTEPHAGSDASDLKTKAVLEKGPDGDHYIINGSKQFITSGKNGDTAIVFAVTDPSAGKKG 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305
              F+VP         G     +++K+G  ++ T  + F        N  G       ++
Sbjct: 183 ISAFIVPT-----DTPGYIVSNIEDKMGQNASDTASIVFEDCRVPAENLLGKEGEGYKIA 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  SV   R +   A+ Y++ R   G  +     ++  +AD+A  
Sbjct: 238 LSGLEGGRIGI----AAQSVGMARAAYEYALQYSKERTSFGKPINKHQAVQFKLADMATQ 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  +    A   D      +EA  A++ A        ++A  V +EA++ +GG GY+
Sbjct: 294 VEAARQMVLHAAQLRDNNLPCLKEACMAKLFA-------SEIAEKVCSEAIQILGGYGYL 346

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R YR+     I  G+
Sbjct: 347 RDYPVERIYRDVRIAQIYEGT 367


>gi|198423810|ref|XP_002130227.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase [Ciona
           intestinalis]
          Length = 435

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 26/246 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC 255
            GLTE   G+D  ++ ++ +  S  G Y L+G K W  +SP++D F++ A+   EG    
Sbjct: 172 FGLTEPNHGSDPGSMETKAKYDSGTGAYILNGAKSWITNSPIADVFVVWAKCAKEGNGKE 231

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            +   +LE G   GL   +++ K   R++ T ++   +       +  D+    GP    
Sbjct: 232 TVRGFILERGM-KGLSTPKIEGKFSLRASITGQIVMEDVAVPAENMFPDVEGLKGP---- 286

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
                L+SA   +S   +  AE   +A R++    +   +P+     +++  AD   +I+
Sbjct: 287 --FGCLNSARYGISWGALGAAEFCLHAARQYTLDRVQFKRPLAQNQLIQKKFADALTEIS 344

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                  R+    DE K+  E       M  + K   C  A  ++    + +GG+G  +E
Sbjct: 345 IGLQSCIRVGRLIDEGKAAPE-------MISLVKRNSCGKALEIVRNMRDTLGGNGISDE 397

Query: 428 RSIARH 433
             I RH
Sbjct: 398 YHIIRH 403


>gi|169604222|ref|XP_001795532.1| hypothetical protein SNOG_05122 [Phaeosphaeria nodorum SN15]
 gi|160706523|gb|EAT87513.2| hypothetical protein SNOG_05122 [Phaeosphaeria nodorum SN15]
          Length = 442

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 30/271 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGR--- 252
           I L +TE   G+D+  I +  +K +DG  Y ++G  KW  +   SD F+   +  G    
Sbjct: 163 ICLAVTEPDAGSDVRNIKTTAEKTADGKHYVVNGTKKWITNGMFSDYFMTAVRTGGPGAS 222

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
            +   L+PR       +GL  ++L + I    +AT  + F + +    FL+G      G 
Sbjct: 223 GISMLLIPRA------SGLKTRKL-DVIAGPLSATTYVTFEDVYVPVEFLIG--KEGEGF 273

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + M    +  L  A  ++ G R++L +A  +A +R      LI+QPV++    ++   +
Sbjct: 274 KQTMVNFNHERLWIAFQAIRGCRIALHDAWQWAIKREAFDKTLIEQPVVRNKFGNMGRQV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPIT---KYWCCKMAPAVIAEAMECIGGSG 423
            +  A + ++    +    +  +A  AR++   T   K     +   V  E ++ +GG G
Sbjct: 334 ESLQAWAEQIIYELE----KLSDADGARLLGGTTALLKVESGMVCKYVAEECLKIMGGLG 389

Query: 424 YIEERSIAR---HYRESPANSILLGSGNAMV 451
             +    AR    YR  P+  +  GS + ++
Sbjct: 390 LTKTGQGARIESFYRAVPSFVVPGGSEDVLI 420


>gi|119500832|ref|XP_001267173.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119415338|gb|EAW25276.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 541

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSPDGRHYIVNGEKKWITNGVWSDYFTTAVRTGG-PGM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  
Sbjct: 324 NGISVLLIEREAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGF 376

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I
Sbjct: 377 KVIMTNFNHERIGIVIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQI 436

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAME 417
            A       L N   + +S  E  A  ++          A  T  +C + A  +      
Sbjct: 437 EATYNW---LENIIYQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSY 493

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG G      + R YR+  A +I  GS   M+
Sbjct: 494 SRGGQG----GKVERLYRDVRAYAIPGGSEEIML 523


>gi|305667360|ref|YP_003863647.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88709408|gb|EAR01641.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 603

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 49/277 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  ++   + FI+ A++E    +  F+
Sbjct: 153 LTEPGAGSDANSGKTKAVLSEDGKHYSITGQKMWISNAGFCNMFIVFARIEDDKNITGFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           V    E+   NG+     + K+G  S++T ++ FSNT              F   +  LN
Sbjct: 213 V----ENDPENGITMGDEEKKLGIHSSSTRQVFFSNTKVPAENMLSERGNGFKIAMNALN 268

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +           I L +A +     R  + EA++YA  R      +I+   +K  IAD+A
Sbjct: 269 IGR---------IKLAAACLEAQ--RRIIGEAVNYANERIQFKTPIINFGAIKGKIADMA 317

Query: 364 LDIAAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D  A  + S+R A              NS  EA+ +  E  YA I   I K    +   
Sbjct: 318 TDTYAGESASYRAAKNIEDRIALRVAAGNSHQEAELKGIE-EYA-IECSILKVAVSEDVQ 375

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +   E ++  GG G+  +  + + +R++    I  G+
Sbjct: 376 STTDEGLQIFGGMGFSADAPMEKAWRDARIARIYEGT 412


>gi|313220589|emb|CBY31437.1| unnamed protein product [Oikopleura dioica]
          Length = 614

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 136/310 (43%), Gaps = 45/310 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ TP + + + P + S E             +A    LTE   G+D +++ ++  K 
Sbjct: 147 ILILGTPEMKEKYLPAVASGE------------KIA-AFCLTEPSTGSDASSVQTRAVKQ 193

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV---------EGRVGCFLVPRLLEDGSPNGLC 271
            DG + ++G K W     ++D F + AQV         + ++  F+V R        G+ 
Sbjct: 194 EDGSFLMNGGKIWITGGGIADIFTVFAQVPVEQEDGSTKDKMTAFIVERDF-----GGVT 248

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM----SVS 326
           +   + K+G + + T E+ F +     +   N+     E  K+ +  L+S       +++
Sbjct: 249 HGAPEKKMGIKCSNTAEVYFDDV---RIPAENIIGEVGEGFKVAMEVLNSGRYGMGATLN 305

Query: 327 GMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAK 384
           G +  L  +A  +A  R      +     ++  +A +  +  A+ A+S+ +AN+ D + +
Sbjct: 306 GTQKGLIKKATEFAANRTQFRNKIYKFGAIQEKLARMHAEQYASEAVSYLVANAMDHKTE 365

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   EAA  +I A    + CC        E ++ +GG GY+ E+ + +  R+     I  
Sbjct: 366 NYHLEAACGKIFASERAWHCCD-------ETIQVMGGMGYMFEKGVEKVMRDLRIFRIFE 418

Query: 445 GSGNAMVLDV 454
           G+ + + L V
Sbjct: 419 GTNDILRLMV 428


>gi|221639593|ref|YP_002525855.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221160374|gb|ACM01354.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 379

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 36/273 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ +   +G Y LSG K F+S    SDA++ + +  G     +   
Sbjct: 124 LTEPGAGSDAAALRTRAEAAPEG-YRLSGTKAFISGGGYSDAYLTMCRTGGAGPKGISTL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
           L+  G+P GL +  L++K+G R+  T +++F      +  DL V     E+ +   Y   
Sbjct: 183 LVPAGTP-GLSFGGLEDKMGWRAQETRQVQFDEC--LVPTDLLVG----EEGRGFAYAMA 235

Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD   ++++   +  A+A   A R +++          +RA       +    AL FRL
Sbjct: 236 GLDGGRLNIAATALGGAQAAFDATRAYMA---------ERRAFGQ---RLDGFQALQFRL 283

Query: 377 AN---SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE-----AMECI---GGSGYI 425
           A       +A+    +AA+      +     C MA   + +     A +C+   GG GY+
Sbjct: 284 AEMEVKLQQARIFLRQAAWKLDQGALDATKFCAMAKLAVTDSAFEVANQCLQLHGGYGYL 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  I +  R+   + IL G+   M + V   L
Sbjct: 344 ADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|149280757|ref|ZP_01886865.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149228504|gb|EDM33915.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 453

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 39/265 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQK +     GLTE   G+  A   +   K     + L+G K W  ++P SD  I+ A+ 
Sbjct: 186 MQKMTTIGAFGLTEPEVGSGAAGGLTTTAKRQGSKWILNGQKKWIGNAPFSDVTIIWARD 245

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR---------SNATVE----LEFSNT 294
             + +V  FLV +        G   +++ +K+  R         +N  V+    L+ +N+
Sbjct: 246 LDDQQVKGFLVRK-----GTKGFEVEKMMDKMALRIVQNGLITLTNCEVDEEDRLQNANS 300

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F      L ++   V           A  +V   R +   A+ Y R R   G  +    +
Sbjct: 301 FKDTAKVLQMTRAGV-----------AWQAVGCARGAYESALQYTRTRKQFGRPIASFQL 349

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  + ++  ++ A   L FRL+   D+     E A+ A++       +C      V++ 
Sbjct: 350 IQNHLVEMLSNLTAMQTLCFRLSQLQDQNMLTDEHASLAKV-------FCSMKTRDVVSR 402

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E +GG+G + E  +AR   ++ A
Sbjct: 403 AREVMGGNGILLEYDVARFVADAEA 427


>gi|124003159|ref|ZP_01688009.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
 gi|123991257|gb|EAY30688.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
          Length = 512

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D A I ++  +  D  Y ++G K F+++ +  D  I + + +   G   V
Sbjct: 125 IAISEPGAGSDAANIQTRAVREGDH-YIVNGSKTFITNGVYGDFIITVVKTDPEAGSAGV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             L+ D +  G+   +LK K+G   + T EL F++               F +L+  L +
Sbjct: 184 SMLVIDRNAEGVTATKLK-KLGWHCSDTAELSFADVKVPASNLIGQEGQGFYYLMNGLQL 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L +   +VS M  ++  ++ Y   R   G  +    V++  IA ++ 
Sbjct: 243 ER-----------LCAVPAAVSAMENAIEVSLQYMSERQAFGRPINKFQVLRHRIAQMSA 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A  A S+     + +     ++ + A+++         + A  V  + ++  GG G+
Sbjct: 292 EVTALKAFSYYCCQLYADGVYDVKQCSMAKLL-------VTEKAEEVATKCLQFFGGYGF 344

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +E+  +AR YR+    +I  GS   M
Sbjct: 345 MEDYPLARMYRDVRVGTIGGGSSEIM 370


>gi|115397873|ref|XP_001214528.1| hypothetical protein ATEG_05350 [Aspergillus terreus NIH2624]
 gi|114192719|gb|EAU34419.1| hypothetical protein ATEG_05350 [Aspergillus terreus NIH2624]
          Length = 541

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGGD-GM 323

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  
Sbjct: 324 NGISVLLIEREAGGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKEN------QGF 376

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I
Sbjct: 377 KVIMTNFNHERIGIVIQCVRFARVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAQMARQI 436

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAME 417
            A       L N   + +S  E  A  ++   I         T  +C + A  +      
Sbjct: 437 EATYNW---LENIIFQCQSMEETEAMLKLGGAIAGLKAQSTQTFEFCAREASQIFGGLSY 493

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GG G      I R YR+  A +I  GS   M+
Sbjct: 494 SRGGQG----GKIERLYRDVRAYAIPGGSEEIML 523


>gi|330818979|ref|XP_003291544.1| hypothetical protein DICPUDRAFT_49903 [Dictyostelium purpureum]
 gi|325078282|gb|EGC31942.1| hypothetical protein DICPUDRAFT_49903 [Dictyostelium purpureum]
          Length = 417

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 37/373 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIH---DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P  E+WDK EF P    +++++      GL+    D     + R  A  I  A     A 
Sbjct: 63  PFAEKWDKEEFFP--REVMKQAAELGFGGLYVK-EDVGGSGLSRLDASIIIEA--LASAD 117

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +S     A ++ +  T    + + P + +          M+K +      LTE 
Sbjct: 118 VSTTAFISIHNMCAGLIDIYGTEEQRQKYLPSLVT----------MEKIASYC---LTEP 164

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D A+++++  +  D  + L+G K F+S        ++    G  G   +  LL + 
Sbjct: 165 GSGSDAASLSTKAVRDGDH-FILNGSKAFISGGGDSEVYLVMVRTGEKGPKGISCLLIEK 223

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324
              GL + + + K+G  +  T  L F +     +   N+  G  +   I +  L+   ++
Sbjct: 224 DTPGLSFGKKEEKLGWNTQPTRALIFEDC---RVPVANLIGGEGQGFNIAMNALNGGRIN 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAATALSFRLANS 379
           +    +  A+A   A R HV      +QP+ K       +AD+A  + A+  +  R A +
Sbjct: 281 IGACSLGGAQASLVAARDHVKVRKQFNQPLEKFQSIQFKLADMATKLHASRVM-IRTAAT 339

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + K  S     A +   + K + C     V  ++++  GG GY+++  + R+ R+   
Sbjct: 340 MLDNKDPS-----AHVYIAMAKLFACDECFKVCDDSLQLFGGYGYLKDYPVERYLRDLRV 394

Query: 440 NSILLGSGNAMVL 452
           + IL GS   M L
Sbjct: 395 HRILEGSDAVMRL 407


>gi|238024065|ref|YP_002908297.1| acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
 gi|237878730|gb|ACR31062.1| Acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
          Length = 379

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----C 255
           LTE + G++   + ++   + DG + L G K F+S+    A  I+ A  +  +G      
Sbjct: 125 LTEPQAGSEANNLRTRA-VLKDGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV-------ELEFSNTFGFLLGDLNVSTGP 308
           F+VP      +P G    + + K+G R++ T        E+   N  G     L ++   
Sbjct: 184 FIVP----TDTP-GFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSN 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  +V   R +  +A  YA  R   G  + +   +   +AD+A  + A
Sbjct: 239 LEGGRIGI----AAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A++ A        +M+ AV + A++  GG GY+ + 
Sbjct: 295 ARLLVHHAARLRTAGLPCLSEASQAKLFAS-------EMSEAVCSAAIQIHGGYGYLADY 347

Query: 429 SIARHYRESPANSILLGS 446
            + RHYR++    I  G+
Sbjct: 348 EVERHYRDARITQIYEGT 365


>gi|261418517|ref|YP_003252199.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319765331|ref|YP_004130832.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261374974|gb|ACX77717.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317110197|gb|ADU92689.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 386

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 17/264 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++ AAI +   +  D  Y ++G K ++++ + +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAAIKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +   + +    G     ++ K+G R + + EL F N       +LG    
Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFIVGNVERKMGLRGSHSAELFFDNLEVPVENVLG--KE 228

Query: 305 STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
             G V  +KIL    + + + + G  + L E  + YA +R   G  +I+Q  ++  +A++
Sbjct: 229 GEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++ I    +  +R+A   D+     +EAA       I K +  ++   +   A++  GG 
Sbjct: 289 SMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGGL 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+++  I R++R++    I  G+
Sbjct: 342 GYMKDYPIERYFRDARITKIYEGT 365


>gi|89889429|ref|ZP_01200940.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89517702|gb|EAS20358.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 392

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 21/240 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLV 258
            GLTE   G++   + ++ +   D I       W  +SP  D  ++ A+ E  R+   LV
Sbjct: 136 FGLTEPDHGSNPGGMVTRFKDAGDHIILNGAKLWISNSPFCDVAVVWAKDENDRIHGVLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F +     +   N+  G       L  L
Sbjct: 196 ERGME-----GFTTPETHNKWSLRASATGELIFQDV---KIPKSNILPGRSGLGAPLSCL 247

Query: 319 DSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLLA 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    ++ K+ S + + A       K    ++A  +  EA + +GG G   E SI RH
Sbjct: 308 WRLGVLREQGKATSAQISMA-------KRNNVEIAINIAREARQMLGGMGITGEYSIMRH 360


>gi|326385814|ref|ZP_08207443.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209793|gb|EGD60581.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 34/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  ++  D  Y +SG K F+S   ++D ++ + +  G  G   +  
Sbjct: 126 LTEPGSGSDAAALRTTARREGDH-YVVSGTKQFISGGGVNDLYVTMVRT-GEPGPKGISC 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306
           L+ +    G+ +   + K+G  ++ T +L   N               F F +  L+   
Sbjct: 184 LVIERDMPGVSFGAPERKLGWNASPTAQLILDNVQVPVANRVGEEGEGFRFAMAGLDGGR 243

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L+    S+ G +  L EAI Y + R   G  + +    +  +AD+A D+
Sbjct: 244 -----------LNIGACSLGGAQRCLDEAIAYVKSRSQFGRTIAEFQNTQFQLADMATDL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ AL +  A     AK  ++     R  A + K        +++  A++  GG GY++
Sbjct: 293 ESSRALLYLAA-----AKVSADAPDKTRFSA-MAKKLATDNGSSIVDRALQLFGGYGYLK 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454
           +  I R +R+   + IL G+   M + V
Sbjct: 347 DYPIERFWRDLRVHRILEGTNEVMRMIV 374


>gi|311105335|ref|YP_003978188.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760024|gb|ADP15473.1| acyl-CoA dehydrogenase, N-terminal domain protein 6 [Achromobacter
           xylosoxidans A8]
          Length = 383

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF 256
           + L LTE   G+D++AI ++  +  D  Y + G K F++ + ++   ++  + E   G  
Sbjct: 126 MALCLTEPEAGSDVSAIRTRAAQDGDD-YVIDGQKVFITCAHVAHQLVVATKTERDAGRH 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + D    G+  + LK  +G R   T E+ F N        L V  G    +   +
Sbjct: 185 GITLFMVDADAPGVTIRPLK-ALGRRMIHTNEVFFDNVRVPAAHMLGVPNGGWNGLMRGL 243

Query: 317 YLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+   +S +    ++  +  A  YA  R   G  +     +    +D+ +       L+
Sbjct: 244 NLERLCLSAAASGNIQRIIDSAKEYADTRTQFGKPIGQYQAVAHKFSDMQIMAETTRVLT 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R+A+  D     + E A A+++A      C  M        ++ +GG+GY+ E  +  +
Sbjct: 304 YRVADMLDAGLQPTSETAIAKVVATENNCKCADMG-------IQIMGGAGYMMENEMQMY 356

Query: 434 YRESPANSILLGSGNAM 450
           +R++    I  G+   M
Sbjct: 357 FRDARVGPIGGGTSEIM 373


>gi|239930857|ref|ZP_04687810.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439228|ref|ZP_06578618.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342123|gb|EFE69079.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 16/276 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           S E      AP+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ 
Sbjct: 109 SEELKKKYMAPLAKGDAMFSYCLSEPDAGSDAAGMKTRAVRDGDA-YVLNGVKRWITNAG 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---F 295
           +S+ + ++A  +       +   + + S  G+ +   + K+G + + T E+   N     
Sbjct: 168 VSEYYTVMAVTDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPA 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             ++G+    TG    MK    LD   ++++   + +A+     A  Y R R   G  + 
Sbjct: 228 DRMIGEEG--TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVRERKQFGKPIA 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+A+ I AA  L++  A   +   +   E           K +   +A  
Sbjct: 283 DFQGVQFMLADMAMKIEAARQLTYAAAAKSERVAAGGGEGDLT-FQGAAAKCFASDVAME 341

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 342 VTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 377


>gi|119718292|ref|YP_925257.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538953|gb|ABL83570.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 42/286 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252
           G+GLTE   GTD+  I +  +   D  Y ++G K W  ++  +D   +L + +       
Sbjct: 121 GIGLTEADAGTDLQGIRTTARLDGDH-YVVNGAKMWITNARYADPLPVLVKTDPSASPAH 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVST---- 306
            G  ++  L+E  +P    Y+  K+  K+G +   + E+         L D+ V      
Sbjct: 180 RGMSVL--LIEADTPG---YEVTKDIPKLGYKGTESCEIR--------LDDVRVPVSQLV 226

Query: 307 GPVED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
           G VE     ++L  L+   ++++   V +A     EA+ YA++R   G  + D   ++  
Sbjct: 227 GGVEGRGMQQVLSALEWGRVNIAARSVGIAQRAHDEALAYAQQRKAFGKPIADFQAIQLK 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + ++   + AA  +++  A++  + ++             + K +C ++A     +AM+ 
Sbjct: 287 LGELGTQVQAARLMAYWAADAVRQGRADGATG--------MAKIFCSEVALNAAIDAMKV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GG GY  E  + R YR++   SI  G+ + +   V   L KG  +
Sbjct: 339 HGGYGYSTEFEVERLYRDAILMSIGEGTNDVLRTVVAKSLVKGETV 384


>gi|27378548|ref|NP_770077.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351696|dbj|BAC48702.1| blr3437 [Bradyrhizobium japonicum USDA 110]
          Length = 392

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 50/315 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +AL  +  + K   PK+ S E+                  L+EK  G+D+AA++   +  
Sbjct: 110 IALGGSAELRKAVLPKVRSGEW-------------LAAFALSEKEAGSDVAAMSCAARAD 156

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--------------FLVPRLLEDGS 266
            D  Y + G K W  +  ++D + + A+     G               F +   ++  +
Sbjct: 157 GDD-YVIDGEKTWISNGGIADVYTLFARTGEAPGARGISAFVVFPDDPGFGIADRIDVIA 215

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           P+ L   R  N           +  S   G   G   ++   ++  +  +    A  ++ 
Sbjct: 216 PHPLATLRFAN---------CRIPASRRLGAPGGGFKLAMQTLDIFRASV----AAAALG 262

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-S 385
             R +L EA+ +AR R + G  L D  + + A+ D+A D  AA  L++R A   D  K  
Sbjct: 263 FARRALDEALSHARSRRMFGATLGDLQLTQAALGDMATDTDAAALLTYRAAWRRDAQKLP 322

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EAA A++ A  T       A  VI  A++  GG G  +   +   YRE  A  I  G
Sbjct: 323 TTREAAMAKLTATET-------AQRVIDRAVQMFGGRGVRKGEVVESLYREIRALRIYEG 375

Query: 446 SGNAMVLDVLNLLEK 460
           +     L V   L K
Sbjct: 376 ATEVQKLIVARDLLK 390


>gi|145224946|ref|YP_001135624.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315445277|ref|YP_004078156.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217432|gb|ABP46836.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315263580|gb|ADU00322.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 397

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 30/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ +   DG Y + G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRAKNNGDGTYTIDGQKMWLTNGGSSTLVATLVRTDEGADKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             FL+  P    + +P GL      +K+G +   T EL F + +    GD+ +   P + 
Sbjct: 189 TAFLIEKPTGFGEVAP-GLTIPGKLDKLGYKGIDTTELIF-DGYRADAGDI-LGEAPGQG 245

Query: 312 -MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +++  ++   ++VS      G+R +   A+ YA++R   G  + +   +   +A++A 
Sbjct: 246 FFQMMDGVEVGRVNVSARACGVGIR-AFELAVKYAQQRSTFGKPIAEHQAIAFQLAEMAT 304

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D  +          + A + KY+  ++   V  ++    GG GY
Sbjct: 305 KVEAAHLMMVNAARHKDSGERND-------VAAGMAKYFASEVCAEVTQQSFRIHGGYGY 357

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  R++P   +L+G G + +
Sbjct: 358 SKEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|39934169|ref|NP_946445.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192289694|ref|YP_001990299.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648017|emb|CAE26537.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192283443|gb|ACE99823.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 404

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K++DG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTKAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 FILEKGMK-----GLSAPKVGGKLSLRASITGEIVMDGVVVPEDALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +  R++       ++P     ++++ +AD+  +I 
Sbjct: 256 --FGCLNRARYGISWGAMGAAEDCFHRARQYTLDRKQFNRPLAATQLVQKKLADMETEIT 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|229007334|ref|ZP_04164933.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228753939|gb|EEM03378.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
          Length = 600

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G        
Sbjct: 156 LTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGE---HFTA 212

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            ++E   P G+     + K+G + ++T  L   +       +LG+  +  G +    IL 
Sbjct: 213 FIVEKEYP-GVSTSPEEKKMGIKCSSTRTLILEDALVPKENVLGE--IGKGHIIAFNILN 269

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                  + +V   + +L  +  YA +R      +   P+++  +A++A  I AA +  +
Sbjct: 270 IGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESSVY 329

Query: 375 RLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           R    F+   S  +EE            A YA I   + K +  ++   V+ E ++  GG
Sbjct: 330 RTVGLFESHMSTLTEEQVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYVVDEGVQIHGG 388

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ E  I R YR+S  N I  G+
Sbjct: 389 YGFMAEYEIERMYRDSRINRIFEGT 413


>gi|154246133|ref|YP_001417091.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160218|gb|ABS67434.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 20/259 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y + G K F+S +  SD ++++ +  G     +   
Sbjct: 123 LTEPGAGSDAAALKTKAVRDGDH-YIVDGQKQFISGAGASDIYVVMVRTGGDGPKGISTL 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P GL +   + K+G     T       V +   N  G       ++   ++  +
Sbjct: 182 VIEAGTP-GLSFGANEKKMGWNVQPTRAVILEGVRVPVQNRLGAEGDGFKIAMAGLDGGR 240

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I       S+ G + +L + + Y R R   G  L     ++  +AD+A ++  A    
Sbjct: 241 LNI----GACSLGGAQAALDKTLAYMRERKAFGQRLDAFQALQFRLADMATELEVARTFL 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A + D   +++ +A     MA   K +       V  EA++  GG GY+ +  + + 
Sbjct: 297 WRAAAALD---AKTPDATRLCAMA---KRFATDAGFNVANEALQLHGGYGYLADYGVEKI 350

Query: 434 YRESPANSILLGSGNAMVL 452
            R+   + IL G+   M L
Sbjct: 351 VRDLRVHQILEGTNEIMRL 369


>gi|298206885|ref|YP_003715064.1| Acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83849519|gb|EAP87387.1| Acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 453

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 60/287 (20%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DG-IYCL 228
           +W PK             MQ+       GLTE   G+ I    SQG + +   DG  + L
Sbjct: 181 EWLPK-------------MQRMEAIGAFGLTEPNVGSAI----SQGMETTCQRDGDTWIL 223

Query: 229 SGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-- 283
           +G K W  ++  +D  I+ A+   + +V  FLV +    G+P G   +++++K+  R+  
Sbjct: 224 NGQKKWIGNATFADVTIVWAKDVDDKQVKGFLVRK----GTP-GFSPEKIEDKMALRTVE 278

Query: 284 NATV-----------ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           NA +            L+ +N+F      L ++   V           A  +V   R + 
Sbjct: 279 NALITITDCRISESDRLQEANSFKDTAKVLKMTRAGV-----------AWQAVGCARGAY 327

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y ++R   G  +    +++  + ++  ++ A   L +RL+   DE   + E+A+ 
Sbjct: 328 ESAVKYCKKREQFGKPIATFQLIQNHLVEMLANLTAMQTLCYRLSELQDEGLLKDEQASL 387

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           A++       +C      V++ A E +GG+G + E  +AR   ++ A
Sbjct: 388 AKV-------FCSMRTRDVVSRAREVMGGNGILLEHDVARFVADAEA 427


>gi|261206060|ref|XP_002627767.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592826|gb|EEQ75407.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239611010|gb|EEQ87997.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327350745|gb|EGE79602.1| short-chain specific acyl-CoA dehydrogenase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 546

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 270 ICLAITEPDCGSDVSNISCEAKLTPDGRHYIVNGEKKWITNGIWADYFTTAVRTGEPGMN 329

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV---- 309
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N     +    
Sbjct: 330 GISVLLIERSAGGVSTRKMDCQ-GMSTSGTAYVTFEDVKVPVENLIGKGNQGFKVIMMNF 388

Query: 310 --EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             E M I+I        V   RV   E++ YA +RH  G  LID PV++  +A +A  I 
Sbjct: 389 NHERMGIII------QCVRFSRVCYEESVKYAHKRHTFGKRLIDHPVIRMKLAHMARQIE 442

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 443 ASHNW---LENLVFQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 499

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 500 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 528


>gi|154340681|ref|XP_001566297.1| acyl-coa dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063616|emb|CAM39801.1| putative acyl-CoA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 629

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 153/374 (40%), Gaps = 77/374 (20%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +MA    G  M   ++  +   LM+  +  +   + PK+ S E+  T             
Sbjct: 144 IMATANWGFSMYSGLSLGACRTLMSWASEELKDQYLPKLVSGEWSGT------------- 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-----AFIMLAQVEGRV 253
           + LTE + GTD++ + ++ +   DG  Y ++G K F+S+   D       I+LA++   +
Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYNITGTKIFISAGDHDLTENIIHIVLARLPNSL 250

Query: 254 ------GCFLVPRLLEDGSPNG-------LCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
                   FLVPR + +  PNG       +    L+ K+G + ++T +L F  + G+L+G
Sbjct: 251 PSTKGLSLFLVPRHVVN--PNGSLEAAKNVECSGLEKKMGIKGSSTCQLSFDKSVGYLIG 308

Query: 301 DLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH----VSGGILI 350
           +      P   MK +  ++++A M  +   V  AE      + YAR R     +SG    
Sbjct: 309 E------PSAGMKQMFTFMNAARMGCALEGVCHAELAFQNGLQYARERRSMRALSGAKEP 362

Query: 351 DQP--------------VMKRAIAD----IALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           ++P              +  +A+A+    +  D+     +     ++   A    E   Y
Sbjct: 363 EKPADRIICHANVRQNLLFAKAVAEGGRALLTDVGRLLDMHAAATDAVKAAALDHEIGFY 422

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             I       W  + A    +  ++  GG GYI+   + +  R+S   +I  G+     L
Sbjct: 423 TPIAKACVTEWGVEAA----SRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQAL 478

Query: 453 DVLN---LLEKGTN 463
           D +    L  KG N
Sbjct: 479 DFIGRKVLSTKGGN 492


>gi|260906632|ref|ZP_05914954.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 389

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 51/282 (18%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E    N   + +  V +  G+TE   G D   +T+  +K  D  Y +SG K ++S  M
Sbjct: 105 SEELKRANLPQIAEGKVHVCFGVTEPDAGLDTTRVTTFAKKRGDE-YVVSGRKVWISKAM 163

Query: 240 -SDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL----- 289
            SD  ++LA+   R         +     D   + +    ++ KIG  + ++ EL     
Sbjct: 164 ESDKILLLARTTKREDAEKPTDGMTLFFTDLDRDHVQINPIR-KIGRNAVSSNELVIEDL 222

Query: 290 ---------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                    E    F +LL  LN         ++LI    A  ++   R +LA+A+ YA 
Sbjct: 223 VIPESHRVGEEGKGFKYLLDGLNPE-------RMLI----AAEALGIGRAALAKAVKYAN 271

Query: 341 RRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLAN-SFDEAKSRSEEAAYAR 394
            R     ++ D+P+     ++  +AD    + AA  L+ R A  ++D+  S   EA  A 
Sbjct: 272 ER-----VVFDRPIGMNQGLQFPLADSLAKLDAAE-LALRKATWTYDQGLSSGREANTA- 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 KY C +        A++  GG GY EE  + R+ RE
Sbjct: 325 ------KYLCAEAGVDAADRAVQVHGGMGYSEEYHVGRYLRE 360


>gi|15922588|ref|NP_378257.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15623378|dbj|BAB67366.1| 379aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 379

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 16/266 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL- 257
           + LTE + G+D+ A+ +  +   + +  L+G K F S+   S   ++LA+  G  G    
Sbjct: 121 VALTEPQAGSDLGALQTTAKPDGNEL-VLNGEKIFTSAASFSTKMVVLARTSGNPGDRQG 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMK 313
           +  LL D    G+   +L + +G R      ++F+N        +  + +   G ++ + 
Sbjct: 180 ISLLLIDSKLPGIEIHKL-DIMGIRGAGVSYVKFNNVRIPKDSIIGKEGDAYRGALKAL- 237

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++     A ++V   R +L EAI  A+ R   G  LI+Q  +   +AD  + + AA  L+
Sbjct: 238 MVSRNGYAGIAVGIARGALEEAISRAQSRKQFGKALIEQEWISFNLADAYIKVEAARLLT 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A  FD     + EA+ A       KY+    A  V   A+   GG G      + R 
Sbjct: 298 WRAAQLFDNDYEATTEASMA-------KYYAAVTATEVTRLALHIFGGHGLNRGSKVERL 350

Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459
           YR++    I  G+    ++ V  L +
Sbjct: 351 YRDAKIMEIAEGTNEMQLVAVSRLFQ 376


>gi|225852804|ref|YP_002733037.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256263711|ref|ZP_05466243.1| acyl-COA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225641169|gb|ACO01083.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263093768|gb|EEZ17773.1| acyl-COA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409336|gb|ADZ66401.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326539045|gb|ADZ87260.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMP 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|218510490|ref|ZP_03508368.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Brasil 5]
          Length = 266

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 9   LAMSEAGAGSDVVSMRLRAERKGD-RYILNGTKFWITNAPHADVLVVYAKTDPAAGAKGI 67

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             L+ E G P G    +  +K+G R + T EL F +       L+G         E +KI
Sbjct: 68  SALIIEKGMP-GFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREG------EGVKI 120

Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+     + A+++      M+  L   + Y R R   G  + D  +M+  IAD+ + + +
Sbjct: 121 LMSGLDYERAVLAAGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNS 180

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A  + +A + D  ++    AA A + A        + A  V  EA++ +GG+GY ++ 
Sbjct: 181 ARAYVYSVARACDAGRATRTNAAAAILFA-------SENAVKVSLEAIQALGGAGYTKDW 233

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 234 PVERFLRDAKLYDIGAGT 251


>gi|157116344|ref|XP_001658431.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108876518|gb|EAT40743.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 422

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 126/316 (39%), Gaps = 48/316 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S++  + T    K + PK+ S EY  +               L+E   G+D  ++ +  +
Sbjct: 136 SLMIKLGTEEQKKKYLPKLCS-EYSGS-------------FALSEPSAGSDAFSLKTTAK 181

Query: 220 KISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           K  DG  Y L+G K W  +S +S  F+++A      G   +   + D    G    + +N
Sbjct: 182 K--DGNHYILNGSKMWISNSDLSGMFLIMANANPSAGYRGITTFIVDRDMEGFTVGKREN 239

Query: 278 KIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G  ++ T +L   N         G        + G         +L+   + +    +
Sbjct: 240 KLGICASGTCQLHLDNVRVPEENILGEFGKGYQYAAG---------FLNEGRIGIGAQMI 290

Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            LA+      I Y   R   G  +     M+  IA IA +I AA  L +  A        
Sbjct: 291 GLAQGCMDATIPYLLERKQFGSDIYSFQSMQHQIATIATEIEAARLLVYNAA-------- 342

Query: 386 RSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           R +EA    +  A + K +  ++A     + ++ +GG G+ ++    + YR+    +I  
Sbjct: 343 RLQEAKVPFLKQAAMAKLYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYE 402

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ N  +  +  +++K
Sbjct: 403 GTSNMQLSTIAKVMKK 418


>gi|90420167|ref|ZP_01228075.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335501|gb|EAS49251.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 410

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 59/330 (17%)

Query: 146 LEAGHLMSPSVTS----ASMVALMT----TPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            EA     PSV++     +MVA M     +     +W PK+          A M+K +  
Sbjct: 102 FEALSYGDPSVSAFLSIHNMVAWMIDSFGSEEQRAEWLPKL----------ASMEKVASY 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF 256
               LTE   G+D AA+ +  +   +G Y L+G K F+S +  SD ++++A+  G  G  
Sbjct: 152 C---LTEPGSGSDAAALRTSAKPNGNG-YVLNGTKSFISGAGFSDLYVVMART-GDAGPK 206

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMK 313
            +  +L +    GL +  L+ K+G  +  T E+     S   G LLG++          K
Sbjct: 207 GISAILVENGTEGLSFGALEKKMGWVAQPTAEVRLDGCSVPGGNLLGEVG---------K 257

Query: 314 ILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIAD 361
              Y   A+M + G R++++            ++I Y + R   G  L +   ++  +AD
Sbjct: 258 GFAY---AMMGLDGGRLNISACALGAAQAALDKSIAYMQDRQAFGKSLTEFQALQFRLAD 314

Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +  ++ AA     + A   D +A   ++  A A+       +    M       A++  G
Sbjct: 315 METELQAARIFLRQAAWKLDTKAPDATKHCAMAKRFVTDASFNVANM-------ALQLHG 367

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ +  I +  R+   + IL G+   M
Sbjct: 368 GYGYLADYGIEKIVRDLRVHQILEGTNEIM 397


>gi|41053742|ref|NP_957180.1| glutaryl-Coenzyme A dehydrogenase [Danio rerio]
 gi|39794610|gb|AAH63972.1| Glutaryl-Coenzyme A dehydrogenase [Danio rerio]
          Length = 441

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D A + ++ +   S   Y +SG K W  +SP +D  ++ A+ E G+V  F
Sbjct: 180 FGLTEPNHGSDPAGMETKAKYNPSSRTYSISGTKTWITNSPYADICVVWAKCEDGKVRGF 239

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           ++ R ++     GL   +++ K   R++AT       VE+   N    LL  ++   GP 
Sbjct: 240 VLERGMK-----GLSTPKIEGKFSLRASATGMIVMDEVEVPEEN----LLPHVSGLAGP- 289

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   ++   +  AE   +A R++    I    P+     +++ +AD+  
Sbjct: 290 -----FGCLNNARFGIAWGALGAAEFCFHAARQYTMDRIQFGVPLARNQLIQKKMADMLT 344

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K   E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 345 EITIGLQSCLQLGRLIDQKKHTPE-------MISLLKRNSCGKALDIARQARDMLGGNGI 397

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 398 ADEYHIIRH 406


>gi|282864555|ref|ZP_06273610.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560494|gb|EFB66041.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 401

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 35/303 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           +RE   T    M    V     ++E   G+D++AITS+G K  D  Y L+G K +L++  
Sbjct: 107 TREQKDTFLPRMALGEVRGAFSMSEPALGSDVSAITSKGVKEGD-EYVLNGQKMWLTNGG 165

Query: 240 SDAFIML------AQVEG-----RVGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATV 287
           +   + +         EG      +  FLV +    G    GL      +K+G +   T 
Sbjct: 166 TSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEAGFGEVRPGLTIPGKIDKMGYKGVDTT 225

Query: 288 ELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
           EL      G  +    V  G       +++  ++   ++V+     +A+      + YA+
Sbjct: 226 ELIMD---GLRIPANRVLGGTTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQ 282

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +     ++  +A++A  + AA A+    A   D  +    EA  A       
Sbjct: 283 QRQTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMA------- 335

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NL 457
           KY   +    V+ +A    GG G+ +E  I R YRE+P   +L+G G A +  ++    L
Sbjct: 336 KYLASEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRL 393

Query: 458 LEK 460
           LE+
Sbjct: 394 LEE 396


>gi|75676343|ref|YP_318764.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74421213|gb|ABA05412.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 381

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 20/261 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ ++  D  Y + G K F+S +  SD ++++ +        +   
Sbjct: 124 LTEPGAGSDAAALRTRARRDGDH-YVVDGQKQFISGAGASDLYVVMVRTGDHGPDGVSAL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+P G+ +   + K+G  +  T  + F       +N  G       ++   ++  +
Sbjct: 183 VVERGTP-GVSFGANERKMGWNAQPTRAVIFENARVPVANRIGAEGAGFRIAMAGLDGGR 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L +A+ Y + R   G  L +   ++  +AD+A ++ AA    
Sbjct: 242 LNI----AACSLGGAQSALDKALGYMKERKAFGKRLDEFQALQFKVADMATELEAARTFL 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A++ D       E   A ++  + K     +   V  +A++  GG GY+ E  I + 
Sbjct: 298 WRAASALD------REDTNATMLCAVAKRLATDVGFDVANQALQLHGGYGYLSEYGIEKI 351

Query: 434 YRESPANSILLGSGNAMVLDV 454
            R+   + IL G+   M L V
Sbjct: 352 VRDLRVHQILEGTNEIMRLIV 372


>gi|17986972|ref|NP_539606.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|62290217|ref|YP_222010.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82700138|ref|YP_414712.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189024452|ref|YP_001935220.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus S19]
 gi|237815725|ref|ZP_04594722.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254689522|ref|ZP_05152776.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           6 str. 870]
 gi|254697661|ref|ZP_05159489.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254730551|ref|ZP_05189129.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           4 str. 292]
 gi|256044953|ref|ZP_05447856.1| Acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256113866|ref|ZP_05454659.1| Acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
 gi|256257771|ref|ZP_05463307.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           9 str. C68]
 gi|260546761|ref|ZP_05822500.1| acyl-COA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260565447|ref|ZP_05835931.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260755045|ref|ZP_05867393.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260758261|ref|ZP_05870609.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260762088|ref|ZP_05874431.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260884056|ref|ZP_05895670.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|265991379|ref|ZP_06103936.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265995216|ref|ZP_06107773.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|297248608|ref|ZP_06932326.1| butyryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|17982620|gb|AAL51870.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|62196349|gb|AAX74649.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82616239|emb|CAJ11289.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189020024|gb|ACD72746.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus S19]
 gi|237789023|gb|EEP63234.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260095811|gb|EEW79688.1| acyl-COA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260151515|gb|EEW86609.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260668579|gb|EEX55519.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260672520|gb|EEX59341.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260675153|gb|EEX61974.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260873584|gb|EEX80653.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|262766329|gb|EEZ12118.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263002163|gb|EEZ14738.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|297175777|gb|EFH35124.1| butyryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMP 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|325000644|ref|ZP_08121756.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 386

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 41/280 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           K+W P++ S E             +    GLTE   G+D +A+ +    + DG  + ++G
Sbjct: 105 KEWLPRLASGE-------------ITASFGLTEADAGSDPSALRTI--AVRDGADWVITG 149

Query: 231 HKWFLS-SPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            K +++ +P +D  ++ A+ +    G  G   FLVP         GL       K+G + 
Sbjct: 150 SKRYITNAPTADVVMVFARTDPDAAGNRGISVFLVP-----ADAPGLGVGPPDRKMGQKG 204

Query: 284 NATVEL---EFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIMS-VSGMRVSLA-EAIH 337
             T ++   E       L+G +  +  G     K L +   +I +   GM   L  E+  
Sbjct: 205 ALTADVHLDEVRVPAAALVGGVEGLHAGFRIAAKCLAHGRLSIAAGCVGMAARLVRESTE 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +AR R   G  +    +++  +AD   D  A  A+    A ++D+   R    A A    
Sbjct: 265 FARTREQGGAPIARFQLVQALVADSVTDHLAGRAMVLEAARAYDDGTDRITGPAAA---- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              KY+  +M   V   A++  GG+GY+ +  + R YR++
Sbjct: 321 ---KYFASEMVGRVADRAVQIHGGAGYMSDTPVERFYRDA 357


>gi|301106653|ref|XP_002902409.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
 gi|262098283|gb|EEY56335.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
          Length = 420

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           +TE   G+D+A   +   K  D  + ++G K W  +  ++  + +LA+ +     G    
Sbjct: 159 VTEPGAGSDVAGAKTTAVKKGDN-WVINGSKMWITNGGVAKWYFVLAKTDPNANAGSAFT 217

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +++  +P G+   R +  IG R + T  + F +       +LGD+            +
Sbjct: 218 GFIVDADTP-GITVGRKEINIGQRCSDTRGISFEDVAVPEENVLGDVGYGFKIAMQAFDI 276

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                AI +V   R +  EA  YA  R   G  +     ++  +AD+A  I A   L+++
Sbjct: 277 TRPPVAIGAVGLARRAFDEARKYALERKTMGAPIAMHQAIQFMLADMATGIEAGRQLTYK 336

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  +       + A + K +    A  V  +A++  GG+G+  E  + + +R
Sbjct: 337 AAYEIDCGRKNT-------MYASMAKRFAGDHANQVTTDAIQIFGGAGFNTEYPVEKLFR 389

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 390 DAKIYQIYEGT 400


>gi|254818880|ref|ZP_05223881.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 381

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 119/303 (39%), Gaps = 52/303 (17%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P + + E               +G+G+TE   G+D+A I +   +  D 
Sbjct: 104 LTTPEQQQRWLPGVVTGE-------------TVLGIGMTEPGTGSDLAGIRTTAVRDGDD 150

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  + D F++  +   +   G  L   L+ D    G    R   KIG 
Sbjct: 151 -YVVNGAKTFISNGQVGDLFVIAVRTSPDRHQGLSL---LVVDADTPGFSRGRNLEKIGL 206

Query: 282 RSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            +  T EL F++               F  L+ +L     P E + + +   +A  ++  
Sbjct: 207 HAQDTSELTFTDMRVPKDNLLESEGRGFYQLMKNL-----PQERLALGVGAVAAAETI-- 259

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               LA  + Y R R   G  +      +  +A++A +I  A           D+  +  
Sbjct: 260 ----LAATLDYVRDRTAFGSPIASFQHSQFVLAELATEIDVARTY-------LDDCLAEH 308

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E       A   K+W   +        ++  GG GY+ E S+AR + ++   +I  G+ 
Sbjct: 309 LEGELTAARAARLKWWTTDLQVRTADRCLQLHGGYGYMREYSVARAFVDARIQTIYGGTN 368

Query: 448 NAM 450
             M
Sbjct: 369 EIM 371


>gi|170690037|ref|ZP_02881204.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144472|gb|EDT12633.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 393

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKMRADKKGDH-YVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   +  E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGT--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|163786292|ref|ZP_02180740.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteriales bacterium ALC-1]
 gi|159878152|gb|EDP72208.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteriales bacterium ALC-1]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D  A + +   I  G  Y L+G K W  +   ++ ++++AQ +   G   + 
Sbjct: 125 LSEPEAGSD--ATSQRTTAIDKGDHYVLNGTKNWITNGGRAEIYLVIAQTDKHKGSHGIN 182

Query: 260 R-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             ++E G+P G      ++K+G R + T  L+F++             FGF      +S 
Sbjct: 183 AFIVEKGTP-GFDIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGDDGFGFRFAMKTLSG 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G        I + +  + ++     LA  + Y++ R   G  + +   +   +AD+  +I
Sbjct: 242 GR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMHTEI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  R A   D+  +    +A A++       +  K+A     EA++  GG+G+++
Sbjct: 293 EAARMLVMRAAWDKDQGNNYDMSSAMAKL-------YASKVAMEHTVEAVQIHGGNGFVK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYHVERLMRDAKITQIYEGT 365


>gi|111027010|ref|YP_708988.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825549|gb|ABH00830.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 387

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  +T++ ++  D  + + G K F+++   +D + +LA+  G     L 
Sbjct: 127 IAVTEPEAGSDLGNVTTRARRDGDE-WVIQGTKRFITNGGFADFYSVLARTGGPGARGLS 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +E   P G+   R + K+G   +AT E+ F         L+G+ +          ++
Sbjct: 186 MFFVEADRP-GVRAARWEQKMGLHGSATAEMHFDEVRVPADHLIGEADKGF-----THLM 239

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D   + V+ M + +++     A  YA  R   G  +     ++  IAD+A+ + ++ 
Sbjct: 240 RGFDEGRLGVAAMCLGISQGALDAATRYASERKQFGKEIAGYQGVQFLIADMAIGVHSSR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L +  AN+F      S        +A + K +   ++  V   A++  GGSGY+ +  +
Sbjct: 300 SLVYDAANAFVNKHPDSSR------LAAMAKTYSSDVSMEVTTNAVQVHGGSGYVRDFPV 353

Query: 431 ARHYRESPANSILLGS 446
               R++    I  G+
Sbjct: 354 EMFMRDAKIGQIYEGT 369


>gi|145221050|ref|YP_001131728.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315441978|ref|YP_004074857.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145213536|gb|ABP42940.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315260281|gb|ADT97022.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 144/360 (40%), Gaps = 45/360 (12%)

Query: 121 DRSFEPVVR--KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA----LMTTPRVHKDW 174
           DR  +P VR  + A+    A +  M Q+    L  P     + V+    ++ T  + + W
Sbjct: 21  DRDVKPTVRDVEHANTYPEAWIDQMKQIGIYGLAVPESYGGTPVSTRCYVLVTQELARGW 80

Query: 175 AP---------------KIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218
                             +F  E       P M    +   + LTE  GG+D+ A+ +  
Sbjct: 81  MSLAGAMGGHTVVAKLLTLFGTEEQKQRYLPAMATGEIRATMALTEPGGGSDLQAMGTVA 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           ++  D +  LSG K ++S+      I L      +       +  +L D    GL   R 
Sbjct: 141 RRDGDDL-VLSGTKTWISNARRSGLIALLCKTDPDATPKHSGISVVLVDNPTPGLTVSRD 199

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGM 328
             K+G +   + EL F         +LG      G  + MK L    I + S  + V+  
Sbjct: 200 LPKLGYKGVESCELAFDACRVPASAILGG-TPGKGFSQMMKGLETGRIQVASRALGVA-- 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A+ +D  +    
Sbjct: 257 SAALEDALAYAQDRESFGRPIWKHQAVGHYLADMATKLTAARQLTLYAADRYDSGERADM 316

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A++ A        ++A  +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 317 EAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 367


>gi|312377272|gb|EFR24143.1| hypothetical protein AND_11484 [Anopheles darlingi]
          Length = 389

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  +  ++D +++ A+ +        
Sbjct: 129 LAMSEAGSGSDVVSMKLRADKQGD-YYVLNGNKFWITNGSVADTYVIYAKTDASAKPQHG 187

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V R        G       +K+G R + T EL F +     G +LG LN     +
Sbjct: 188 ITAFIVER-----GTAGFTQGPKLDKLGIRGSPTSELIFEDVKVPVGNVLGGLNKGVYVL 242

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                L  L  A   V  M+ +   A  YA  R      + +  +++  +AD+   + A 
Sbjct: 243 MSGLDLERLVLAAGPVGLMQAACDVAFEYAHVRKQFNTRIGEFQLLQGKMADMYTTMNAC 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D   +  ++ A   +       +C + A  +  +A++ +GG+GYI +  
Sbjct: 303 RAYLYSVARACDAGHANPKDCAGVIL-------YCAEKATQIALDAIQILGGNGYINDYP 355

Query: 430 IARHYRESPANSILLGS 446
             R  R+     I  G+
Sbjct: 356 TGRIMRDCKLYEIGAGT 372


>gi|87198158|ref|YP_495415.1| long-chain acyl-CoA dehydrogenase [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87133839|gb|ABD24581.1| Long-chain acyl-CoA dehydrogenase [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 384

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 43/293 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           K W PK+ S E             V   + +TE   G+D+  + +  +K  DG  Y ++G
Sbjct: 113 KKWLPKMVSGE-------------VITAIAMTEPGTGSDLQGMRTTAKK--DGNHYVING 157

Query: 231 HKWFLSSPMSDAFIML---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K ++++  +   I++      E +     V  +L +    G    R  +KIG     T 
Sbjct: 158 SKTYITNGQNADLILVCCKTDTEIQPAWKGVSIVLVEADREGFKRGRNLDKIGQDEADTS 217

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS---------AIMSVSGMRVSLAEAIHY 338
           EL F +        + ++    E+ K  IYL S         A+ + +  + +  + + +
Sbjct: 218 ELFFEDV------RVPITNCLGEEGKGFIYLMSELPQERLSIAVGAQASAQKAFDDTVEF 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMA 397
            R R   G  ++D    +  +ADI   +    A L + L+    +  +  E AA      
Sbjct: 272 TRERKAFGKPILDFQNTRFTLADIKAKLQVGWAHLDWALSRHLRKELTPEEGAA------ 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              K W  ++   V+ + ++  GG+GY+ E +IAR +R +    I  G+   M
Sbjct: 326 --AKLWHTELQWEVMDKCLQLHGGAGYMNEYAIARAWRGARVTRIFGGTNEIM 376


>gi|6978431|ref|NP_036951.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Rattus norvegicus]
 gi|113016|sp|P15650|ACADL_RAT RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|202685|gb|AAA40668.1| long chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Rattus
           norvegicus]
 gi|205145|gb|AAA41514.1| long chain acyl-CoA dehydrogenase [Rattus norvegicus]
 gi|38541337|gb|AAH62006.1| Acyl-Coenzyme A dehydrogenase, long-chain [Rattus norvegicus]
 gi|149016009|gb|EDL75290.1| acetyl-Coenzyme A dehydrogenase, long-chain, isoform CRA_a [Rattus
           norvegicus]
 gi|227488|prf||1704376A long chain acyl-CoA dehydrogenase
          Length = 430

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 217

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    +  +K+G ++  T EL F +       LLG+ 
Sbjct: 218 VTNREARSPAHGISLFLVENGMKGFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGEE 277

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y R+R   G  +     ++
Sbjct: 278 NKGFYYLMQELPQERLLI------ADLAISACEFMFEETRNYVRQRKAFGKTVAHIQTVQ 331

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  +I    A         D      E        A + KYW  ++   V  + +
Sbjct: 332 HKLAELKTNICVTRAF-------VDSCLQLHETKRLDSASASMAKYWASELQNTVAYQCV 384

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|326436363|gb|EGD81933.1| glutaryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 420

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 18/260 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D A + ++  K+ DG + L+G K W  +
Sbjct: 140 FGTEAHKEKYLPRLATGEIVGAFGLTEPNHGSDPAGMETKLTKV-DGGFLLNGTKTWITN 198

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           SP++D F++ A+++G++   ++ R +      GL   +++ K+  R++ T ++   + F 
Sbjct: 199 SPVADVFVVWAKLDGKIRGVILERGMA-----GLETPKIEGKLSLRASVTGQIVMEDVFV 253

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +  ++    GP   +    Y   A  ++      L  A  Y   R   G  L    
Sbjct: 254 PEENMFPEVTGLKGPFSCLNNARY-GIAWGALGAAESCLEMAREYTLDRKQFGRPLAANQ 312

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +M+  +A++  +I+       R+       + + E   +A     + K   C  A  +  
Sbjct: 313 LMQLKMANMLTEISIGLQACLRV------GRLKQERGVFAPDQVSLIKRNSCGKALDIAR 366

Query: 414 EAMECIGGSGYIEERSIARH 433
            A + +GG+G   +  I RH
Sbjct: 367 VARDMLGGNGISGDYHIIRH 386


>gi|251794527|ref|YP_003009258.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247542153|gb|ACS99171.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 591

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 39/304 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRV-GCFLV 258
           LTE   G+D     +  +   DG  Y L+G K ++++   +D FI+ A+VEG     F+V
Sbjct: 147 LTEPASGSDALGAKTTAKLSQDGSHYILNGSKLYITNAGFADVFIVYAKVEGEAFSAFIV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
               E G P G      ++K+G + ++T  L F +       +LG++        ++  +
Sbjct: 207 ----EKGMP-GFSLGPEEHKMGIKGSSTRPLFFEDVAVPVENVLGEIGQGHKIAFNILNI 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                    + G + ++  A  YA  R   G  +   P++   +AD+ +      ++ +R
Sbjct: 262 GRFKLGAGCLGGSKETIELASKYANTRKQFGRAISSYPLIGAKLADMNIRTFVLESMVYR 321

Query: 376 LANSFD-------------EAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            A   D             +A  R+ +A   YA +   I K +  +    V  E ++  G
Sbjct: 322 TAGWIDAMLSAEGAGADAPDAGMRAAKAISEYA-LECSINKVFASETLDFVADEGVQIHG 380

Query: 421 GSGYIEERSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQL 468
           G GYI+E  + R YR+S  N I  G+   N M++            L LLEK  +L  +L
Sbjct: 381 GYGYIKEYKVERIYRDSRINRIFEGTNEINRMLIPGTLLKKAMKGELPLLEKAQSLQAEL 440

Query: 469 FSTL 472
              +
Sbjct: 441 LQPM 444


>gi|329897226|ref|ZP_08271965.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
 gi|328921288|gb|EGG28683.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
          Length = 386

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 11/242 (4%)

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           AA+T+    I  G Y LSG   F+S   S D  ++ A+  G  G   V   L D    G+
Sbjct: 134 AAVTATASPIDSG-YELSGTYRFVSHGHSADILLVAARAAGSEGSQGVGLFLVDAKAEGV 192

Query: 271 CYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             +R+      R  A V L+      + + G         T  V+ + I +  D     +
Sbjct: 193 SRKRVPTMDQTRPLAEVTLDKVQVAANASLGCPGNAGQALTQLVDVLSIFVSADQ----L 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + SL   + Y + R   G  +     +K   AD+ L + A+ ++ +  A + DE   
Sbjct: 249 GGAQASLDMTVDYLQERVQFGRTIASFQAVKHKCADMMLKVEASRSIVYYAACAIDEWLQ 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +AA     A +TK +C      V    ++  GG G  EE  I  +++ + +    LG
Sbjct: 309 GRYDAAQLAEAASMTKAYCSDAFFFVSGCGIQLFGGVGITEEYDIQLYFKRAKSTETFLG 368

Query: 446 SG 447
           +G
Sbjct: 369 AG 370


>gi|88802897|ref|ZP_01118424.1| Acyl-CoA dehydrogenase, C-terminal domain family protein
           [Polaribacter irgensii 23-P]
 gi|88781755|gb|EAR12933.1| Acyl-CoA dehydrogenase, C-terminal domain family protein
           [Polaribacter irgensii 23-P]
          Length = 388

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 20/278 (7%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219
           M ++ T+  ++  W    F  E       P+  +   +G  GLTE   G++ + +    +
Sbjct: 95  MSSIQTSLVMYSIWQ---FGSEEQKQKYLPLLASGELLGSFGLTEPNFGSNASDMHCNFK 151

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + D I       W  ++  +D  I+ A+ E  +V   +V    E  + +     +++NK
Sbjct: 152 IVEDKIIINGSKLWIGNASHADIAIVWAKNEQNKVQGIIV----ETANISNFTTAKIENK 207

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL---AEA 335
              R++ T EL F N+     G L   +  ++D    + +    ++   + ++L     A
Sbjct: 208 WSFRASNTGELTFDNS-ALDKGQLLEKSASIKDAYSCLNIGRYAVAWGSLGIALDCYETA 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  +    ++++ +A++  +I  A  LS++LA   D     +++A +A+I
Sbjct: 267 LQYANERIQFGKPIASYQLIQKKLAEMITEITKAQLLSYQLAVLMD-----AQKATHAQI 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              + K     MA  V  EA + +GG G   E  I RH
Sbjct: 322 --SMAKRNNVAMAQEVAKEARQILGGMGITGEYPIMRH 357


>gi|95930231|ref|ZP_01312969.1| acyl-CoA dehydrogenase-like [Desulfuromonas acetoxidans DSM 684]
 gi|95133694|gb|EAT15355.1| acyl-CoA dehydrogenase-like [Desulfuromonas acetoxidans DSM 684]
          Length = 383

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 23/258 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           L E   G+D  +I ++ Q+  DG + L+G K F++   ++  ++++A+        +   
Sbjct: 125 LAEAGSGSDAVSIKTRAQRNGDG-WQLNGRKMFVTQGSVAGLYVVMARSGEHKKSAISAY 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMK 313
           L+E  +P G+       K+G RS+ T  + F         LLG+    L+ +   ++  +
Sbjct: 184 LVERDTP-GVTPSAPLEKLGCRSSNTTAVHFDQVQLAEEQLLGEEHRALSAAFSLLDHGR 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A ++   MR  L E+  +  RR   G  +     ++  +AD+A    AA  L+
Sbjct: 243 VTI----AALACGIMRGCLEESQRHTARRQQFGTPINTFQAVQWPMADMATHYDAAWLLT 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A   D+ ++    AA A++ A        +MA      A++  GG GY++   + R 
Sbjct: 299 ARAAQLCDDGQTCGTAAAKAKLFAG-------EMAVKSAERAVQLQGGYGYLKNSCVERF 351

Query: 434 YRESPANSILLGSGNAMV 451
           YR++    I  G G A +
Sbjct: 352 YRDAKLCDI--GEGTAEI 367


>gi|225627779|ref|ZP_03785816.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254708004|ref|ZP_05169832.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis M163/99/10]
 gi|254710373|ref|ZP_05172184.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis B2/94]
 gi|254714368|ref|ZP_05176179.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M644/93/1]
 gi|254717267|ref|ZP_05179078.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M13/05/1]
 gi|256031867|ref|ZP_05445481.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis M292/94/1]
 gi|256160063|ref|ZP_05457757.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M490/95/1]
 gi|256255268|ref|ZP_05460804.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti B1/94]
 gi|256369734|ref|YP_003107244.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260169002|ref|ZP_05755813.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261219087|ref|ZP_05933368.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261222465|ref|ZP_05936746.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261315498|ref|ZP_05954695.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261317937|ref|ZP_05957134.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261322147|ref|ZP_05961344.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261758495|ref|ZP_06002204.1| acyl-COA dehydrogenase [Brucella sp. F5/99]
 gi|265988966|ref|ZP_06101523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265998432|ref|ZP_06110989.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|225617784|gb|EEH14829.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|255999896|gb|ACU48295.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260921049|gb|EEX87702.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260924176|gb|EEX90744.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261294837|gb|EEX98333.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297160|gb|EEY00657.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261304524|gb|EEY08021.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261738479|gb|EEY26475.1| acyl-COA dehydrogenase [Brucella sp. F5/99]
 gi|262553056|gb|EEZ08890.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264661163|gb|EEZ31424.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|333024694|ref|ZP_08452758.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744546|gb|EGJ74987.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQK 220
           + L  T    ++W P++ + E             +    GLTE   G+D     T+    
Sbjct: 100 IHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVLD 146

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 147 EATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISSIIVP----SGTP-GFT 201

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+L          + L  LD   ++++ +
Sbjct: 202 VAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGYA-----QFLRILDEGRVAIAAL 256

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD+ L      A + RL  S+ +A
Sbjct: 257 ATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMEL-----RAHTARL--SWRDA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     +A +  GG G++ E  +AR +R+  A  + 
Sbjct: 310 ASRLVRGEAFKKEAALAKLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILE 367

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 368 IGEGTSEVQRMLIARELG 385


>gi|300722664|ref|YP_003711954.1| xenocoumacin synthesis acyl-CoA dehydrogenase [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629171|emb|CBJ89767.1| Acyl-CoA dehydrogenase involved in xenocoumacin synthesis
           [Xenorhabdus nematophila ATCC 19061]
          Length = 383

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 19/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             L+E   G+D  AI ++ +   +G       KW   S ++D F++ A+ E +V  F+V 
Sbjct: 120 FALSEPEAGSDANAIKTRYEVTENGFRINGNKKWITYSGIADLFLIFAKCEEKVSAFIVE 179

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             +E     GL  + +   + +R     EL F N       L+G        V +    +
Sbjct: 180 FGVE-----GLTRKPMSGLMASRGAYLSELNFDNVEIPKESLVGREGEGFSFVANTA--L 232

Query: 317 YLDSAIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           Y     ++ +G+ +   ++ E + YAR+R   G  +    +++  IAD A    AA A  
Sbjct: 233 YFGRYSIAWAGVAIAHAAMEEMVTYARKRKQFGQKIAQHQLIQGIIADSATAFYAAKAAC 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++ +       R++    A +   I KY    +A  V   A++ +GG+G   +  + R 
Sbjct: 293 EKIGH------MRNQGDHNAIMETNIAKYNSSAVAMLVANNAVQVLGGNGLSNKYPVERL 346

Query: 434 YRESPANSILLGS 446
           YRE+    I+ G+
Sbjct: 347 YREAKVLEIIEGT 359


>gi|297625448|ref|YP_003687211.1| crotonobetainyl-CoA dehydrogenase (crotonobetainyl-CoA reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921213|emb|CBL55763.1| Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 378

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPR 260
           +TE   G+    +++   +    +Y L+GHK F++S M   + +++A+    +G +    
Sbjct: 123 MTEPSAGSSWDDMSTTYSRKGGKVY-LNGHKTFITSSMKVPYLVVMARDADNMGTY--TE 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+  + L +K+G R ++  ++ F N        FG    + N     V+D  
Sbjct: 180 WFVDMSLPGITKEPL-HKLGLRMDSCADIYFDNVELREEDLFGT---EGNGFKRGVKDFD 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   + A+ +      +  +A  YA +R   G  +  + +++   AD+ +DI       
Sbjct: 236 -LERFEVAMTNYGTAYCAFEDAAKYANQRVQGGEAIARKQLIQLKFADMKVDIT------ 288

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   E   +++     R    + KY+C   A  V+  A++ + G G   E  + R 
Sbjct: 289 -NMRNMLYEIAWKADNDQLGRGDCSMAKYYCSHAAARVVDNALQTLAGVGVTGEHRVQRF 347

Query: 434 YRESPANSILLGSGNAMVL 452
           YR+   + +  G+   M+L
Sbjct: 348 YRDLRVDRVSGGTDEMMIL 366


>gi|156039679|ref|XP_001586947.1| hypothetical protein SS1G_11976 [Sclerotinia sclerotiorum 1980]
 gi|154697713|gb|EDN97451.1| hypothetical protein SS1G_11976 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 809

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G+ G  
Sbjct: 533 ICLAITEPDAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGVWCDYFTTAVRTGKDGMN 592

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            V  LL + S  G+  +++  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 593 GVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYITFEDVKVPVENLIGKEN------QGFK 645

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  +   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 646 VIMTNFNHERIGIIIQCLRFSRVCYEESVKYAHKRRTFGKKLIDHPVIRLKLAHMARQIE 705

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+ +    L +   +     E  A  R+  PI         T  +C + A  +       
Sbjct: 706 ASYSW---LESLIYQCSKMGETEAMLRLGGPIASLKAQATVTFEFCAREASQIFGGLSYS 762

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 763 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 791


>gi|145540409|ref|XP_001455894.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423703|emb|CAK88497.1| unnamed protein product [Paramecium tetraurelia]
          Length = 414

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 140/311 (45%), Gaps = 59/311 (18%)

Query: 143 MAQLEAGHLMSPSVTSASMV---ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           + ++++G+  + SV S+ ++       +  +   + PK+ S EY              +G
Sbjct: 108 IERVDSGYRSALSVQSSLVIHPIYQFGSKELKDKYIPKLASGEY--------------VG 153

Query: 200 -LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
             GLTE   G+D  ++ S  +K  D  Y L+G K W  +SP++D F++ A+ E G +  F
Sbjct: 154 AFGLTEPDHGSDPGSMKSHAKK-KDNYYILNGTKSWITNSPIADVFVIWAKDEKGDIRGF 212

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           ++ + ++     GL   +++ K+  RS+ T ++        ++ ++ V   P E+M   +
Sbjct: 213 VLEKGMK-----GLSTPKIEGKLSLRSSITGQI--------IMDNVKV---PQENMFTTV 256

Query: 317 Y--------LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADI 362
                    L++A   ++   +  AE   H+ R     R+     +   Q + K+  A++
Sbjct: 257 KGLKGPFSCLNNARFGIAWGTLGAAEFCFHHTRQYALDRKQFDANLASFQLIQKK-FAEM 315

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             DIA A     +++   +  +  +E+ +       + K   C +A  +  E  + +GG+
Sbjct: 316 VTDIALAQQAVLQVSRLKENDQLATEQVS-------LIKRNSCAIALKIARECRDIMGGN 368

Query: 423 GYIEERSIARH 433
           G  +E  + RH
Sbjct: 369 GISDEYQVIRH 379


>gi|16126042|ref|NP_420606.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|221234812|ref|YP_002517248.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13423230|gb|AAK23774.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|220963984|gb|ACL95340.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 381

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 53/260 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVE------GRV 253
           LTE   G+D A++  Q + + DG  Y L+G K ++++   ++ F ++A+ +        V
Sbjct: 123 LTEAEAGSDSASV--QTRAVRDGDHYVLNGVKRYITNAGRANLFTVMARTDPNTKGGAGV 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
             FLVP  L      GL   + + K+G +     ++ F         D+ V   PVE+  
Sbjct: 181 SAFLVPADLP-----GLSVGKPEKKMGQQGAHIHDVVFE--------DVRV---PVENRL 224

Query: 312 ----------MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
                     M++L   D   + +S + V +AE      + YA  R   G  +    +++
Sbjct: 225 GAEGEGFTVAMRVL---DRGRVHISAVCVGVAERLIADCVAYASERKQFGQPIASFQLIQ 281

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD   +  AA AL F  A   D   + + EAA        TK +  +M   V   A+
Sbjct: 282 AMIADSKTEALAAKALVFDTARKRDAGANVTLEAA-------ATKLFASEMVGRVADRAV 334

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GG+GY+ +  I R YR+
Sbjct: 335 QVFGGAGYVADYGIERLYRD 354


>gi|307946601|ref|ZP_07661936.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307770265|gb|EFO29491.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 379

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 22/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D A++ ++   + DG  Y L+G K F+S    SD ++ + +  G     +  
Sbjct: 124 LTEPGSGSDAASLRTKA--VDDGDHYVLNGSKAFISGGGASDLYVTMVRTGGEGPSGISC 181

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
            ++E  +P GL +   + K+G +S  T ++ F       +N  G        +   ++  
Sbjct: 182 VVIEKDAP-GLSFGAQEIKMGWKSQPTAQVNFQDCRVPKANRIGNEGEGFKFAMAGLDGG 240

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I       S+   +  L  A  Y + R   G  L +   ++  +AD+A ++ AA  L
Sbjct: 241 RINI----GACSLGAAQTCLDRATEYLKERKQFGKALAEFQALQFRLADMATELEAARLL 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D AKS     A A  +A + K         V+ EA++  GG GY+ +  I R
Sbjct: 297 LLKAAGEVD-AKS-----ADANKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYPIER 350

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
             R+   + IL G+   M + +   L KG
Sbjct: 351 FLRDVRVHQILEGTNEIMRVIIARHLLKG 379


>gi|254712837|ref|ZP_05174648.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715906|ref|ZP_05177717.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261217668|ref|ZP_05931949.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261320545|ref|ZP_05959742.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|260922757|gb|EEX89325.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261293235|gb|EEX96731.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGLDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LV R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|228993736|ref|ZP_04153641.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
 gi|228999779|ref|ZP_04159353.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|228759986|gb|EEM08958.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|228765947|gb|EEM14596.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
          Length = 608

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G        
Sbjct: 164 LTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGE---HFTA 220

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            ++E   P G+     + K+G + ++T  L   +       +LG+  +  G +    IL 
Sbjct: 221 FIVEKEYP-GVSTSPEEKKMGIKCSSTRTLILEDALVPKENVLGE--IGKGHIIAFNILN 277

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                  + +V   + +L  +  YA +R      +   P+++  +A++A  I AA +  +
Sbjct: 278 IGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESSVY 337

Query: 375 RLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           R    F+   S  +EE            A YA I   + K +  ++   V+ E ++  GG
Sbjct: 338 RTVGLFESHMSTLTEEQVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYVVDEGVQIHGG 396

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ E  I R YR+S  N I  G+
Sbjct: 397 YGFMAEYEIERMYRDSRINRIFEGT 421


>gi|254702046|ref|ZP_05163874.1| Acyl-COA dehydrogenase, short-chain specific [Brucella suis bv. 5
           str. 513]
 gi|261752613|ref|ZP_05996322.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261742366|gb|EEY30292.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|238508355|ref|XP_002385373.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220688892|gb|EED45244.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 441

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 35/303 (11%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQV 249
           ++T +AI    TE   G+D+A IT+   K +DG  Y ++G  KW  +   SD   M  + 
Sbjct: 157 KRTCIAI----TEPEAGSDVANITTTATKSADGKFYIINGAKKWITNGIWSDYTTMAVRT 212

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            G     L   ++      G+  +R+    G ++  T  +E  +     +G+L    G  
Sbjct: 213 GGPGASGLSVMVVPLKGYPGVTMRRIHVS-GTKTAGTTYIELDDV-KVPVGNLIGREG-- 268

Query: 310 EDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + M+ ++       L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A   
Sbjct: 269 DGMRTIMTNFNHERLTIAVQCTRQARVALSSAFGYCLKREAFGKTLMDQPVVRHRLAKAG 328

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC----I 419
            ++   +A   ++         + E+    R++  +T     K A  V+ E  +C     
Sbjct: 329 AELETVSAWIEQILYQL----CKLEKVEADRLLGGVTALAKAKAA-MVLNECAQCAVLLF 383

Query: 420 GGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           GG+G  +      +    R+ P + I  GS +        LL+       +++ T E+ L
Sbjct: 384 GGAGLTQSGQGEIVEAIMRDVPVSRIPGGSEDV-------LLDLSVRQLVKIYQTQEKKL 436

Query: 477 GSS 479
           G +
Sbjct: 437 GQA 439


>gi|195442770|ref|XP_002069119.1| GK23895 [Drosophila willistoni]
 gi|194165204|gb|EDW80105.1| GK23895 [Drosophila willistoni]
          Length = 420

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 25/258 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D+  I ++ +K  D  Y ++G K W  +  +++ + +LA+      C    
Sbjct: 154 GVTEPGAGSDVGGIKTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTNPDPKCPASK 212

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                ++E  SP GL   R +  +G R++ T  + F +     +   NV  G     KI 
Sbjct: 213 AFTGFIVERDSP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIA 268

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ Y+  R   G  +     ++  +AD+A+ +  +
Sbjct: 269 MGTFDKTRPPVAAGAVGLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGVETS 328

Query: 370 TALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++RL A   D+ +  S  A+ A+  A         +A  + ++A++  GG+G+  E 
Sbjct: 329 R-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADVANKIASDAVQIFGGNGFNSEY 380

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 381 PVEKLMRDAKIYQIYEGT 398


>gi|148908850|gb|ABR17530.1| unknown [Picea sitchensis]
          Length = 227

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 16/220 (7%)

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  + P+++  I+ A+ +   G   +   + +    G    +  +K+G R + T EL F 
Sbjct: 2   WCTNGPVAETLIIYAKTDPNAGSKGITTFIIEKGMEGFSTAQKLDKLGMRGSDTCELVFE 61

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMS---VSGMRVSLAEAIHYARRRHVSG 346
           N F   + + N+     + + +L+    L+  ++S   +  M+ S+   + Y R+R   G
Sbjct: 62  NCF---VPEENILGKEGKGVYVLMSGLDLERLVLSAGPIGLMQASMDVVLPYVRQREQFG 118

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD+   + ++ A  + +A   D  +   ++ A   + A        +
Sbjct: 119 RPIGEFQLIQGKLADMYTALQSSRAFVYSVAKKCDNGEVDKKDCAGVILFAA-------E 171

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A  V  +A++C+GG+GY+ E    R  R++    I  G+
Sbjct: 172 NATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLFEIGAGT 211


>gi|332185453|ref|ZP_08387201.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332014431|gb|EGI56488.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+ ++  +  D  Y +SG K F+S    +   +     G  G   +  L
Sbjct: 125 LTEPGSGSDAAALKTRAVRDGDH-YVVSGSKQFISGGGENEVYVTMVRTGEDGPKGISCL 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPV 309
           + D    G+ +   + K+G  S  T ++ F N              GF +  + +  G  
Sbjct: 184 VIDKDTPGVSFGANERKLGWHSQPTRQVMFDNVRIPVANRLGAEGEGFRIAMMGLDGG-- 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L+    S+ G +  L EA+ Y + R   G  + +    +  +AD+A ++ AA
Sbjct: 242 -------RLNIGACSLGGAQRCLDEAVAYVKDRRQFGKAIAEFQNTQFTLADMATELEAA 294

Query: 370 TALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            AL +  A    D A  ++  AA A+ +A  T         +V+  A++  GG GY+ + 
Sbjct: 295 RALLYLAAAKVTDNAPDKTRFAAMAKRLATDT-------GSSVVDRALQLHGGYGYLMDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I R +R+   +SIL G+   M + V
Sbjct: 348 PIERFWRDLRVHSILEGTNQVMRMIV 373


>gi|239931124|ref|ZP_04688077.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439493|ref|ZP_06578883.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342388|gb|EFE69344.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 385

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 49/276 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F V     D    G    R  +K+G R++ T EL F         D+ V   PV
Sbjct: 184 RHGISLFAV-----DTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PV 227

Query: 310 EDM-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354
           ED+     K   YL   + S       G       A+ +A++ +V    +  +PV     
Sbjct: 228 EDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQERTVFGKPVAHFQN 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI  
Sbjct: 287 TKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDR 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 340 CLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|190891898|ref|YP_001978440.1| glutaryl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190697177|gb|ACE91262.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 394

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D   + ++ +KIS G Y L G K W  +SP++D F++ A+ E     +  
Sbjct: 136 FGLTEPDAGSDPGGMKTRAEKISGG-YRLRGSKMWISNSPIADVFVVWAKSEAHNNEIRG 194

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+       T   LL  ++   GP    
Sbjct: 195 FVLEKGMK-----GLSAPKIGGKLSLRASITGEIVMDGVEVTEDALLPGVSGLKGPFG-- 247

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +I 
Sbjct: 248 ----CLNRARYGISWGVMGAAEDCWFRARQYGLDRKQFGKPLAGMQLYQKKLADMMTEIT 303

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  + K   C  A  +  +A +  GG+G   E
Sbjct: 304 LGLQGSLRVGRLMDEHKMAPE-------MVSLVKRNNCGKALDIARQARDMHGGNGIQIE 356

Query: 428 RSIARH 433
             + RH
Sbjct: 357 YHVMRH 362


>gi|219670602|ref|YP_002461037.1| acyl-CoA dehydrogenase [Desulfitobacterium hafniense DCB-2]
 gi|219540862|gb|ACL22601.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 380

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 42/280 (15%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---- 246
           +++  V   +G TE + G+D +AI +   + +  +Y L+GHK F+S  +++ +++     
Sbjct: 112 VKQGQVPFCIGFTEPQAGSDTSAIQTTYTRRNGKVY-LNGHKTFISGALTNPYLLCMARN 170

Query: 247 AQVEGRVGCFL---VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------- 294
                +   F    VP      S  G+  ++L +KIG     T E+   N          
Sbjct: 171 CDETDKTKAFTMWWVPM-----SAPGIKVEQL-HKIGWHMLETCEIYLENVEVEEKDIVG 224

Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               GFL    N  T         + + + I+ ++    +  +A+ YA +R   G  +  
Sbjct: 225 QEGHGFLQLMKNFETER-------LLMAATILGMA--ECAFEDAVRYANQRVQFGKPIGT 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  I  +AL I     L ++ A          E     +I + +TK +C +    +
Sbjct: 276 FQLIQEKITYMALKIENMRNLIYKTA-------WEKENGISTQITSALTKLYCAQSGNEI 328

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           I +A++ +GG GY  +  I+R +R++    I  G+   M+
Sbjct: 329 IDDALQIMGGIGYTNDCRISRLWRDARNYRIGGGTDQVMI 368


>gi|332560800|ref|ZP_08415118.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332274598|gb|EGJ19914.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 377

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 34/311 (10%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+ T   VH      I  R   P  +     P  + +      LTE   G+D +A+ S+ 
Sbjct: 81  AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRA 140

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272
           ++ + G Y + G K F++S  ++   I+ A++EG  G     CFL P      +P G   
Sbjct: 141 RR-AGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGITCFLTP----TDTP-GYEV 194

Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +++ K+G  ++ T  L F +         G       ++   +E  +I I    A  SV
Sbjct: 195 VKVEEKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETGRIGI----AAQSV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YAR R   G  LI+   +   +A+    + AA  +    A   D  + 
Sbjct: 251 GMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQP 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA A++ A        + A  ++++A++  GG GY  +  + R YR+     I  G
Sbjct: 311 CLTEAAMAKLFA-------SEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEG 363

Query: 446 SGNAMVLDVLN 456
           + +   + +L 
Sbjct: 364 TSDIQKMLILR 374


>gi|328880386|emb|CCA53625.1| Glutaryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 398

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 35/266 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
           W PK+ + EY              IG  GLTE   G+D  A+ +  ++  DG  + L+G 
Sbjct: 130 WLPKMAAGEY--------------IGCFGLTEPDAGSDPGAMRTNAKR--DGSDWILNGT 173

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  +  ++D  ++ A+ E  V  FLVP     G+P G     +K K+  R++ T EL 
Sbjct: 174 KMWITNGSVADVAVVWARTEDGVRGFLVP----AGTP-GFSAPEIKMKLSLRASVTSELV 228

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
             +       +L +    +GP+  +    +      ++   R  L  A+ YAR R V   
Sbjct: 229 LEDVRLPADAMLPEARGLSGPLGCLNEARF-GIVFGALGAARDCLETAVSYARDRTVFAR 287

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    + ++ +AD+A+++     L+  L    D     +E+ +       + K    + 
Sbjct: 288 SLASYQLTQQKLADMAVELGKGMLLALHLGRLKDAGALTAEQIS-------VGKLNNVRE 340

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A A+  E    +G +G   E  + RH
Sbjct: 341 AIAIARECRTILGANGITLEYPVLRH 366


>gi|295107103|emb|CBL04646.1| Acyl-CoA dehydrogenases [Gordonibacter pamelaeae 7-10-1-b]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------R 252
           LG TE + G+D AA+ +   K  DG   ++G+K F +S     +++     G        
Sbjct: 122 LGFTEPQAGSDSAAMATTATK-RDGKVYINGNKTFNTSADRAPYMLCVCRSGVNESPYKD 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVS 305
              +L P         G+  ++L +KIGN    T       VE E S+  G         
Sbjct: 181 FSMYLFPM-----DRPGVAIEKL-DKIGNNMCGTYEVHLDDVECEESDLVGEECKGFYQL 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               E  ++ I       +V   R +  EA+ YA +R   G I+    +++  + D+ + 
Sbjct: 235 MKNFEVERLTI----CAANVGMARCAYDEALRYAAQRMQFGKIIGSFQLVQEKLVDMRIK 290

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I     L ++ A   D  +S         I + + K +  + A  VI +AM+ +GG GY 
Sbjct: 291 IENMQNLLYKTAWKKDNGES-------IMIDSSLVKRYTGQAAFEVIDDAMQIMGGIGYT 343

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            +  I+R +R+     I+ G+   MV
Sbjct: 344 HDCRISRLWRDQRVYRIMAGTEEIMV 369


>gi|254719359|ref|ZP_05181170.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. 83/13]
 gi|265984360|ref|ZP_06097095.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839133|ref|ZP_07471950.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. NF 2653]
 gi|264662952|gb|EEZ33213.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306405680|gb|EFM61942.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. NF 2653]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +       V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTGFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|167044721|gb|ABZ09391.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine microorganism HF4000_APKG7N23]
          Length = 389

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 42/269 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------- 249
           L+E   GTD AA+ ++  +  DG  + L+G K W  +   +D F++ A+V          
Sbjct: 125 LSEAGSGTDAAAMVAKATE--DGSNFILNGEKMWVTNGTTADLFVVFAKVTNDPEYGKKK 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302
            G V  F++ +  E     G    + ++K+G RS+ T  L          N  G +    
Sbjct: 183 HGGVTSFIIEKDFE-----GFKIGKKEDKLGIRSSDTCTLILDNCKVPKRNVLGEVGKGF 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   +++ +I I    A  ++   + +   A+ Y++ R   G  +     +   +A++
Sbjct: 238 AIAMNALDNSRIGI----AAQALGIAQGAYETALKYSKERETFGKPIAAHQSIGNYLAEM 293

Query: 363 ALDIAAATALSFRLANS----FDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A+ I A     ++ A S    ++E  +R + EA++A++ A  T  W       V  +A++
Sbjct: 294 AMRIDAVRLQVYKAAWSKMKHYEENGNRHTLEASFAKLNAGDTAMW-------VSEKAVQ 346

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
            +GG GY  +  + R +R++    I  G+
Sbjct: 347 ILGGYGYTTDFPVERFFRDAKITQIYEGT 375


>gi|56459289|ref|YP_154570.1| glutaryl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56178299|gb|AAV81021.1| Glutaryl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 390

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ +  ++   G Y LSG K W  +SP++D F++ A+++G +  F++
Sbjct: 136 FGLTEPDSGSDPASMRTTAKRTDKG-YVLSGSKMWITNSPIADVFVVWAKLDGEIRGFVL 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
            + ++     GL   ++  K   R++ T E+       +   +  ++    GP   +   
Sbjct: 195 EKGMK-----GLSAPKIDGKFSLRASITGEIVMDGVEVSEDHIFPEVKGLKGPFSCLNKA 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  S+         A  Y   R   G  L    ++++ +AD+  +I+       +
Sbjct: 250 RY-GIAWGSLGAAEFCWHAARQYTLERSQFGRPLAANQLIQKKLADMQTEISLGLLGCLQ 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                D       +     I   + K   C  A  +  +A +  GG+G  +E  + RH
Sbjct: 309 AGRELD-------KGTLNPIAISLIKRNSCGKALDIARQARDMHGGNGIADEYHVIRH 359


>gi|262196551|ref|YP_003267760.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079898|gb|ACY15867.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 31/270 (11%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRVGCF 256
           +E   G+D+A ++++ +K  D  Y ++G K W  +  ++  + +LA     Q    + CF
Sbjct: 127 SEPDAGSDVAGLSTRVEKHGDD-YVINGQKRWITNGGVASWYTVLATFDKSQRHKGIACF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309
           +V     D    G+   R ++K+G R++ T ++ F +         G   G   V+    
Sbjct: 186 VV-----DADTPGVKTGRKEDKMGQRASNTTDVIFEDVKVPKSALIGPENGGFKVAMKTF 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +  I   +A +    +R +L E+  YA  R   G  +     ++  IAD+ +     
Sbjct: 241 DRSRPWIAAGAAGV----IRRALDESRAYALERKTFGTPIAQHQAIQFMIADMGIAYENT 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A + D  +  S  +AYA       K +    A  V  +A++  GG GY +E  
Sbjct: 297 RMLCHKAAWNVDRGELDSVVSAYA-------KAYGADAAMRVTTDAVQVFGGYGYTKEYP 349

Query: 430 IARHYRESPANSILLGSGNAM-VLDVLNLL 458
           + +  R++    I  G+     V+   NLL
Sbjct: 350 VEKLMRDTKLLQIYEGTSQIQRVVIARNLL 379


>gi|47227421|emb|CAF96970.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 49/372 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------G 251
           LTE   G+D+A++T++     DG  + L+G K W  +   +D   + A+ E         
Sbjct: 154 LTEPGSGSDVASMTTRATLSEDGRRFLLNGSKIWISNGATADIMTVFAKTEVVVDGTKKD 213

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
           +V  F+V R        G+   R ++K+G R + T E+ F        N  G + G   +
Sbjct: 214 KVTAFIVERAF-----GGVVSGRPEDKLGIRGSNTCEVTFDNVPVPVENVIGEVGGGFKI 268

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +   +   +  +   ++ M    M +  AE    YA  R   G  L +  +++   A +A
Sbjct: 269 AMNILNSGRFSMGSSASGMIKKLMALVSAEWTSEYAATRKQFGKSLSEFGLIQEKFAVMA 328

Query: 364 LDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           L+     ++++  A   D       S EAA  ++ +     W C      ++EA++ +GG
Sbjct: 329 LNAFVMESMAYLTAGMMDRPGIPDCSLEAAMVKVFSS-EGSWVC------VSEALQVLGG 381

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD----- 475
            GY +     R+ R+     I  G+   + + V L  ++    +       +++      
Sbjct: 382 VGYTKNYPYERYLRDCRILPIFEGTNEVLRMYVALTGIQHAGKVLTGRIKEMKRGNVGLA 441

Query: 476 LGSSGKKVITILRDSI--SLCKEDKGL-------ARFLTEKIALASSA--AALYRAGMND 524
           LG +G+K+ + L  S+   L  +D  +       A+ L E ++L  S   + LYR G   
Sbjct: 442 LGMAGRKIRSSLGASVDLGLTGKDGAVHPSLTESAKKLEENVSLFGSTVESLLYRYGKTI 501

Query: 525 IADVFLENRFLD 536
           + +  +  +  D
Sbjct: 502 VDEQLMLKKVAD 513


>gi|12857969|dbj|BAB31161.1| unnamed protein product [Mus musculus]
          Length = 375

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 104 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 162

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    R  +K+G ++  T EL F +       LLG+ 
Sbjct: 163 VTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEE 222

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y ++R   G  +     ++
Sbjct: 223 NKGFYYLMQELPQERLLI------AELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQ 276

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  E +
Sbjct: 277 HKLAELKTHICVTRAF-------VDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECV 329

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 330 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 363


>gi|302900122|ref|XP_003048198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729130|gb|EEU42485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 427

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 25/255 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++      G Y LSG K W  +SP++D  ++ A
Sbjct: 154 MAKGKLLGAFGLTEPNHGSDPGSMETVARPHPTKKGYYLLSGAKTWITNSPIADVLMVWA 213

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +++  G++  FLV R  +D     L    +K+K G R++ T  ++  +     + + N+ 
Sbjct: 214 KLQETGKIRGFLVER--KDCPAGTLETPAIKDKNGLRASITGMIQLDDC---PVPEENMF 268

Query: 306 TGPVEDMK-ILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRA 358
              VE +K     L++A   ++ G+  +L + I  AR     R+   G  L    ++++ 
Sbjct: 269 PN-VEGLKGPFSCLNNARYGIALGVMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKK 327

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD + D A  T  + ++    DE K+  E       M  + K   C  A        E 
Sbjct: 328 LADASTDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDAALRNARILQEI 380

Query: 419 IGGSGYIEERSIARH 433
            GG+   +E  I RH
Sbjct: 381 FGGNAVSDEYMIGRH 395


>gi|256389600|ref|YP_003111164.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256355826|gb|ACU69323.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 516

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           + LAE   +A RR +S G L+D  V +R +AD A       AL F LA   D      +E
Sbjct: 253 IQLAE--RFAGRRGISTGRLLDNGVTQRILADCAAATRTVEALVFSLAERLDRGGPVPDE 310

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             +A       K   C++A  V+ + ++ +G  G+++   + +++R+     I  G+  A
Sbjct: 311 FFFA------CKVIGCELAGQVVDQCVQLMGARGFVDTDIVGKYFRDFRVLRIFEGATEA 364

Query: 450 MVLDVLNLLEKGTNL---FEQLFSTLEQDLGSS 479
           M + V      GT +    E   +T+ +  G++
Sbjct: 365 MSVFV------GTRIVRDLESFHTTMVKTFGAT 391


>gi|269128824|ref|YP_003302194.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313782|gb|ACZ00157.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 386

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 24/284 (8%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           D+  +   R Y P     M    +   + LTE  GG+D+ A+ +    + +  Y ++G K
Sbjct: 100 DFGTEEQKRRYLPR----MATGELRAAMALTEPGGGSDLQAMRTTAT-LDEDHYVINGAK 154

Query: 233 WFLSSPMSDAFIML---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++++      I L      E R     +  LL +  P GL   R   K+G +   + EL
Sbjct: 155 TWITNARRAGLIALLCKTDPEARPAHKGISILLVEKVP-GLTVSRDLPKLGYKGVESCEL 213

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F +       LLG      G  + MK L    +  A  +    R +  +A  YAR+R  
Sbjct: 214 AFEDCRVPRTALLGGRE-GRGFAQMMKGLEIGRIQVAARATGVGRAAFDDAFRYARQRES 272

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L    A  +D  +    EA  A++ A  T    
Sbjct: 273 FGKPIWQHQSIGNYLADMATKLTAARRLLLHAAERYDSGERCDMEAGMAKLFASET---- 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              A  +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 329 ---AMEIALNAIRIHGGYGYSTEFDVERYFRDAPL--MIVGEGT 367


>gi|224003693|ref|XP_002291518.1| probable acyl-coa dehydrogenase, short/branched chain specific
           [Thalassiosira pseudonana CCMP1335]
 gi|220973294|gb|EED91625.1| probable acyl-coa dehydrogenase, short/branched chain specific
           [Thalassiosira pseudonana CCMP1335]
          Length = 374

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 22/269 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T       L+E   GTD  A+ +      DG  Y L+G K W  +S  +  F++ A
Sbjct: 103 PRLATECVSSFALSEAGSGTDAFAMKTTATPSPDGSYYILNGEKLWISNSREAGVFLVFA 162

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
                +    +   + D    G+   + + K+G R+++T  + F N       +LG++ +
Sbjct: 163 NANPELKHKGITAFMVDARTEGIHVGKPEKKLGLRASSTCPVMFDNVKVDAVDVLGEVGL 222

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
                 ++     L+   + ++  ++ +A+     A+ Y + R   G  L D   M+   
Sbjct: 223 GYKYCINI-----LNEGRIGIAAQQLGIAKGCYDIAMPYIKERTQFGTKLADFQGMEHQY 277

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A IA +I A   +++      +      +EA+       + K +  ++A    ++++E +
Sbjct: 278 AQIATEIHACEVMTYNACRMKENGLPFVKEAS-------MVKLYTSQVAEKAASKSIEWL 330

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448
           GG G+ ++    + YR+    SI  G+ N
Sbjct: 331 GGLGFTQDTLAEKFYRDCKVGSIYEGTSN 359


>gi|254455203|ref|ZP_05068638.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198263613|gb|EDY87885.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 410

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K+ DG Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 152 FGLTEPEAGSDPAGMKTTAKKV-DGGYVLNGAKMWISNSPIADVFVIWAKSEAHGGKIRG 210

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++ + ++     GL   ++  K+  R++ T E+   N     + D  +  G VE +K  
Sbjct: 211 FVLEKGMK-----GLSAPKIGGKLSLRASVTGEIVMENV---EVSDDALLPG-VEGLKGP 261

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   ++   +  AE     A  Y   R   G  L    + ++ +AD+  +I+  
Sbjct: 262 FGCLNRARFGIAWGVMGAAEDCWHRARDYGLNRVQFGKPLAQTQLFQKKLADMQTEISLG 321

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R     ++     E       +  + K   C  A  +   A +  GG+G + E  
Sbjct: 322 LQGALRTGRMLEDGTCGPE-------LISLIKRNNCGKALDIARHARDMHGGNGIMAEYH 374

Query: 430 IARH 433
           + RH
Sbjct: 375 VMRH 378


>gi|302685389|ref|XP_003032375.1| hypothetical protein SCHCODRAFT_68226 [Schizophyllum commune H4-8]
 gi|300106068|gb|EFI97472.1| hypothetical protein SCHCODRAFT_68226 [Schizophyllum commune H4-8]
          Length = 516

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 33/269 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-- 255
           I L +TE   G+D+A +  + +K+  G       KW  ++  SD F          GC  
Sbjct: 247 ICLAITEAFAGSDVAGLRGRAKKVEGGWRVTGTKKWITNATFSDYFT--------TGCRT 298

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
               LV  L+E G   G+  + +K    + +  T  + F N F    ++LG+ N      
Sbjct: 299 DQGGLVVLLIERG--EGVETKPIKTSY-STAAGTGYITFDNVFVPDDYILGEENKGL--- 352

Query: 310 EDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               IL   +     ++G      R  + E + +  +R V G  LI QPV++  IA +  
Sbjct: 353 --QVILSNFNHERWGMTGGSIGAQRAIVEECLKWTTQRKVFGKPLISQPVVRAKIAAMIA 410

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +A      +    +    R +    A  +A   K +  + A     +A++  GG G 
Sbjct: 411 RVESAQNWLENITYQMNNMSYREQADKLAGQIA-FCKMYATRTAQETATDAVQIFGGRGI 469

Query: 425 IEE---RSIARHYRESPANSILLGSGNAM 450
            +    + I  ++R  P ++IL G+ + +
Sbjct: 470 TKSGMGKFIEHYHRTVPFDAILGGAEDVL 498


>gi|62752841|ref|NP_001015788.1| acyl-CoA dehydrogenase family, member 9 [Xenopus (Silurana)
           tropicalis]
 gi|58477081|gb|AAH89733.1| MGC108374 protein [Xenopus (Silurana) tropicalis]
          Length = 622

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 42/314 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     DG  + L+G K W  +  ++D F + A+ E         
Sbjct: 181 LTEPGSGSDAASIQTRATLTPDGKHFLLNGSKIWISNGGLADIFTVFARTEVVDKDGATK 240

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+ + + ++K+G R + T EL F NT        G + G   
Sbjct: 241 DKISAFIVERAF-----GGVTHGKPEDKLGIRGSNTCELHFENTKVPVENVIGEVGGGFK 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIAD 361
           V+      M IL     ++ S S GM   L E    YA  R      L D  +++   A 
Sbjct: 296 VA------MNILNSGRFSMGSASAGMIKKLIEMTGDYACTRKQFNKRLSDFQLIQEKFAL 349

Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +A       ++++  A   D       S EAA  ++ +     W C      ++EA++ +
Sbjct: 350 MAEKAFVMESMAYLTAGMMDRPGLPDCSVEAAMVKVFSS-EGAWLC------VSEALQIL 402

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG GY+++    R  R+S    I  G+     M + +  +   G  L  ++    + ++G
Sbjct: 403 GGLGYMKDYPYERFLRDSRILLIFEGTNEILRMYIALTGMQHAGRILTGKIKEMKKGNVG 462

Query: 478 SSGKKVITILRDSI 491
            + +     LRDS+
Sbjct: 463 VALEMFTKKLRDSL 476


>gi|225679594|gb|EEH17878.1| medium-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 438

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 138/319 (43%), Gaps = 52/319 (16%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-Y 226
           P V K  +P++  R + P      ++T +AI    TE   G+D+A IT++  K +DG  Y
Sbjct: 133 PPVLKFGSPELQER-FLPDLLTCKKRTCIAI----TEPDAGSDVANITTRATKSADGKHY 187

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ--RLKNKIG---N 281
            ++G K ++++ +   +  +A   G  G            P+GL      LKN  G    
Sbjct: 188 IINGSKKWITNGIWADYTTMAVRTGGPG------------PSGLSIMVVPLKNYHGVTMR 235

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSG 327
           R + T +     TF   L D+ V   PVE+        MK ++       L   I     
Sbjct: 236 RFSVTGQACSGTTF-IELDDVKV---PVENLIGQEGMGMKYIMTNFNHERLTITIAVTRQ 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA----LSFRLAN-SFDE 382
            RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ A  A      ++L N S D+
Sbjct: 292 ARVALSAAFEYCLKREAFGKTLMDQPVVRHRLAKAGAELEAMWAWVEQFLYQLNNMSKDQ 351

Query: 383 AKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           A  R     A A+  A +    C ++A  +   +     G G I ER     YRE P   
Sbjct: 352 ADFRLGGLTALAKAKAGMVLNECAQVAVLLFGGSGLTRTGQGEIAERI----YREVPGAR 407

Query: 442 ILLGSGNAMV-LDVLNLLE 459
           I  GS + ++ L V  L++
Sbjct: 408 IPGGSEDVLLDLSVRQLVK 426


>gi|164426463|ref|XP_961222.2| hypothetical protein NCU04231 [Neurospora crassa OR74A]
 gi|157071346|gb|EAA31986.2| predicted protein [Neurospora crassa OR74A]
          Length = 697

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 162/418 (38%), Gaps = 71/418 (16%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLL--VALIANFPSVVHK---ELELLGEYVLSCTAQEL 73
           +++ F   QP   I  N +  D  L  +A +   PS++ K   E+  LG+ VLS    + 
Sbjct: 6   ANTGFIQQQP---IIKNQFHEDVSLQRIAKLYLPPSLLEKVTPEISRLGDAVLSQQIFDW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
              A  NTP L   G       K E      W  L      +G+    +D +  P     
Sbjct: 63  ITDAERNTPYLRGSGRDAFGRPKQELIVTEGWRKLQEFGFANGVVAINYDSTSSPSPNGP 122

Query: 132 AHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALM----TTPRVHKDWAP---KIFSREY 183
             + I+  R +L  +    + M P+        L+    TTP +  + +     +F   Y
Sbjct: 123 YSRLIQFIRCHLW-EASCANTMCPAAMQDGAARLLQRHLTTPPLAANLSETERSVFQNAY 181

Query: 184 DP-TNKAPMQKTSVAIGLGLTEKRGGTDIA-------------------AITSQGQKISD 223
           D  T++ P    +   G  +TE+ GG+D++                    +  + + +  
Sbjct: 182 DHLTSRDPAY--TWTSGQWMTERTGGSDVSQTETVATYSPFPAGRQQPVPLACKEENMPL 239

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLL---EDGSP----------- 267
           G + +SG KWF S+  S   I+LA+    +G   F  P      E  SP           
Sbjct: 240 GPWSISGFKWFSSATDSQMTILLAKTRPGMGVSAFFAPMRRWNPELVSPTCTGPGATGGT 299

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+   RLK+K G  S  T ELE  +  G+L+G        ++++  ++ +  A  +V
Sbjct: 300 ELNGVTISRLKSKFGTVSLPTAELELKDMRGWLIGKEGEG---IKEISTILNITRAHTTV 356

Query: 326 SGMRV---SLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSF 374
           S M      +  A  YA  R  +G        L   P+  R +AD+  +      L+F
Sbjct: 357 SSMGYLGRGIGVAKAYALVREAAGVGKGRRLPLYKHPLHMRTLADLTAEYHGLMLLTF 414


>gi|148667825|gb|EDL00242.1| mCG121561 [Mus musculus]
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 217

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    R  +K+G ++  T EL F +       LLG+ 
Sbjct: 218 VTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEE 277

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y ++R   G  +     ++
Sbjct: 278 NKGFYYLMQELPQERLLI------AELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQ 331

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  E +
Sbjct: 332 HKLAELKTHICVTRAF-------VDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECV 384

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|329940354|ref|ZP_08289635.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329300415|gb|EGG44312.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 404

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 45/271 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------------AQVEGRV 253
           G+D++AITS+  +  D  Y L+G K +L++  S   + +              A+    +
Sbjct: 135 GSDVSAITSKAVRDGDD-YVLNGQKMWLTNGGSSTLVAVLVRSDEGHSPEEAAAEPHKSM 193

Query: 254 GCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308
             FLV +    G    GL       K+G +   T EL        ++  L V      G 
Sbjct: 194 TTFLVEKEPGFGEVRPGLTIPGKIEKMGYKGVDTTEL--------IMDGLRVPADRVLGG 245

Query: 309 VEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           V        +D         A       R +    I YA++RH  G  +     ++  +A
Sbjct: 246 VTGRGFYQMMDGVEVGRVNVAARGCGVARRAFELGIDYAQQRHTFGKPIAQHQAIQFKLA 305

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  + AA A+    A   D  +    EA  A       KY   +    V+ +A    G
Sbjct: 306 EMATKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHG 358

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G+ +E  I R YRE+P   +L+G G A +
Sbjct: 359 GYGFSKEYEIERLYREAPM--LLIGEGTAEI 387


>gi|312381501|gb|EFR27238.1| hypothetical protein AND_06191 [Anopheles darlingi]
          Length = 393

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 23/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  +  ++D +++ A+ +        
Sbjct: 133 LAMSEAGSGSDVVSMKLRADKQGD-YYVLNGNKFWITNGSVADTYVIYAKTDASAKPQHG 191

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F+V R        G       +K+G R + T EL F +     G +LG LN     +
Sbjct: 192 ITAFIVER-----GTAGFTQGPKLDKLGIRGSPTSELIFEDVKVPVGNVLGGLNKGVYVL 246

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                L  L  A   V  M+ +   A  YA  R      + +  +++  +AD+   + A 
Sbjct: 247 MSGLDLERLVLAAGPVGLMQAACDVAFEYAHVRKQFNTRIGEFQLLQGKMADMYTTMNAC 306

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D   +  ++ A   +       +C + A  +  +A++ +GG+GYI +  
Sbjct: 307 RAYLYSVARACDAGHANPKDCAGVIL-------YCAEKATQIALDAIQILGGNGYINDYP 359

Query: 430 IARHYRESPANSILLGS 446
             R  R+     I  G+
Sbjct: 360 TGRIMRDCKLYEIGAGT 376


>gi|296411261|ref|XP_002835352.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629130|emb|CAZ79509.1| unnamed protein product [Tuber melanosporum]
          Length = 433

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 22/267 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-------PMSDAFIMLAQVEGR 252
           L ++E   G+D+ ++    + + DG + L+G K ++++       P +D  ++ A+ +  
Sbjct: 164 LAMSEHSAGSDVVSMKCHAKAV-DGGWVLNGTKMWITNARIAIHGPDADVVVVYAKTDPE 222

Query: 253 VGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            G   +  L LE G     C ++L +K+G R + T EL F + F      L  +   V  
Sbjct: 223 KGSKGITALILEKGMEGYTCARKL-DKLGMRGSNTGELIFDDVFVPHANQLGPTNRGVRV 281

Query: 312 MKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   + L+  ++S      M+ +L   + Y  +R   G  +    +++  +AD+   ++A
Sbjct: 282 LMEGLDLERLVLSAGPLGLMQAALDITLPYVHQRKQFGIPIAHNQLIQAKLADMHTKLSA 341

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A +F  A   DE    +++ A A + A      C         +A++C+GG+GY+ E 
Sbjct: 342 ARAYTFAAARRVDEGVIDTKDCAGAILFAADRATECA-------LDAIQCMGGNGYVNEV 394

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455
              R  R++    I  G+G   +  ++
Sbjct: 395 PAGRLLRDAKLYEI--GAGTTQIRHIV 419


>gi|229145684|ref|ZP_04274066.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST24]
 gi|296503615|ref|YP_003665315.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|228637774|gb|EEK94222.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST24]
 gi|296324667|gb|ADH07595.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis BMB171]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A++EGR  VG F++PR  
Sbjct: 136 RGGKPETIAAQQGEK-----WVINGRKTFTTMAPVLDYFIISARMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|297190609|ref|ZP_06908007.1| long-chain-acyl-CoA dehydrogenase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197717921|gb|EDY61829.1| long-chain-acyl-CoA dehydrogenase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 380

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 41/309 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS      + T    + W P   S E             +   + +TE   G+D
Sbjct: 94  IIGPYLTS------LATDEQKRRWLPGFCSGE-------------IITAIAMTEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I +  +   D  + L+G K F+S+  ++D  I++A+     G   +  L+ +    G
Sbjct: 135 LQGIRTTAEDRGDH-WLLNGSKTFISNGILADLVIVVAKTTPEGGAHGLSLLVVERGAEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +KIG +S  T EL F++       LLG+LN +      + ++  L    M+++
Sbjct: 194 FERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELNGAF-----IHLMTNLAQERMAIA 248

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              ++ AE +      Y + R   G  L     ++  IA++A + A   A         D
Sbjct: 249 VAGIAAAEHLLEITTEYVKEREAFGRPLARLQHIRFEIAELATECAVTRAF-------LD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +         + A + K+W  ++        ++  GG GY+ E  +AR + +    +
Sbjct: 302 RCITDHTNGELDAVHASMAKWWATELQKRAADRCLQLHGGYGYMNEYRVARAFTDGRIQT 361

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 362 IYGGTTEIM 370


>gi|158522193|ref|YP_001530063.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511019|gb|ABW67986.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 380

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 25/249 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253
           +GLTE   G+D+A++ +   K  D  Y L+G K F+++ P++D  ++ A+ +       +
Sbjct: 125 MGLTEPDAGSDVASLKTTAVKKGD-TYVLNGSKMFITNGPIADVALVYAKTDPEKRHEGI 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V    E G+P     Q LK K+G R++ T EL FS+       L+G      G + 
Sbjct: 184 SAFIV----EKGTPGFSTGQPLK-KMGCRTSPTSELFFSDCEIPAENLVG--KEGNGFLM 236

Query: 311 DMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+ + +  SA+++  V G +  L     YA +R   G  +      K  +A++ +   +
Sbjct: 237 AMQTVEWDRSALLAPMVGGTKYILDRCAEYASKRVQFGKAIGQFQATKHKLANMRIFYES 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R+A   ++    +       + A + K +    +   + +A+   GG GY  E 
Sbjct: 297 AKLLVYRVAWHKNQGNPLN------HLSAAMAKLFVGDWSLGPVNDALLLHGGYGYCHEY 350

Query: 429 SIARHYRES 437
           ++   +R++
Sbjct: 351 AMECAFRDN 359


>gi|195500366|ref|XP_002097342.1| GE24541 [Drosophila yakuba]
 gi|194183443|gb|EDW97054.1| GE24541 [Drosophila yakuba]
          Length = 415

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 156 LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITA 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVE 310
           FL P+     +  GL   + ++K+G R+ +T +L        +L D+ V        P +
Sbjct: 215 FLTPK-----NVPGLTIAKKESKMGMRATSTCQL--------VLEDVQVPRSRVLGAPGD 261

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A 
Sbjct: 262 GFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKQLARMQLIQQKLADMAT 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  L++R A   D     ++EAA A++ A     +C         + ++ +GG GY
Sbjct: 322 RVETSRLLTWRAAWLKDNGLPITKEAAMAKLNASEAATYCAH-------QCIQILGGMGY 374

Query: 425 IEERSIARHYRESPANSILLGS 446
             +     +YR +    I  G+
Sbjct: 375 TTDLPAELYYRNARVTEIYEGT 396


>gi|195329634|ref|XP_002031515.1| GM26034 [Drosophila sechellia]
 gi|194120458|gb|EDW42501.1| GM26034 [Drosophila sechellia]
          Length = 420

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 161 LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITA 219

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVE 310
           FL P+ +      GL   + ++K+G R+ +T +L        +L D+ V        P +
Sbjct: 220 FLTPKDVP-----GLSIAKKESKMGMRATSTCQL--------MLEDVQVPRSRVLGAPGD 266

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A 
Sbjct: 267 GFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKQLARLQLIQQKLADMAT 326

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  L++R A   D     ++EAA A++ A     +C         + ++ +GG GY
Sbjct: 327 RVEISRLLTWRAAWLMDNGLPITKEAAMAKLHASEAATFCAH-------QCIQILGGMGY 379

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +     +YR +    I  G+     + + N
Sbjct: 380 TTDLPAELYYRNARVTEIYEGTSEIQRIVIAN 411


>gi|86751182|ref|YP_487678.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574210|gb|ABD08767.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 25/273 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           M +  +  G+ +TE   G+D+ ++ +   K+    Y ++G K F+++   +D  I++A+ 
Sbjct: 117 MARGELIGGIAMTEPGTGSDLQSVRTTA-KLEGDTYVINGQKTFITNGQNADLIIVVART 175

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307
            G     L    +E     G    R  +KIG  ++ T EL F N        L    G  
Sbjct: 176 GGPGAKGLSLIAMETKDNPGFKRGRNLDKIGLHASDTSELFFDNATAPKENVLGGEEGKG 235

Query: 308 --------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                   P E + I      A+ +V+ M  ++     Y R R   G     QP++    
Sbjct: 236 FAQLMQQLPQERLII------AVGAVAAMERAVKLTTDYTRERKAFG-----QPILD--F 282

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            + A  +A     +F      D    R        + A + K+W  +     + E ++  
Sbjct: 283 QNTAFTLAERKTEAFIARVFVDFCIERLIAGDLDAVTASMAKWWTTQKQVETVDECLQLH 342

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GG GY++E  I R + ++    I  G+   M L
Sbjct: 343 GGYGYMQEYPIGRMFVDARIQKIYGGTNEVMKL 375


>gi|52549991|gb|AAU83840.1| acyl-CoA dehydrogenase short-chain specific [uncultured archaeon
           GZfos34G5]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 123/255 (48%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257
             LTE   G+D  A+ +      D  Y L+G K +++ + ++D +I+ A  + G+    +
Sbjct: 126 FALTEPSAGSDPTAMDTNAVHEGDE-YLLNGRKAYITNTSVADIYIVFAYTDKGKKRAGM 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
              ++E G+  G  +  + + +G RS     L+F++     + + N+     +  KI + 
Sbjct: 185 SAFIVEKGT-KGFSFAGINDMLGMRSCIVGGLKFNDC---RVPEENLLGREGDGFKIAMG 240

Query: 317 YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +++S + V + +A       YA+ R  S   + +   ++  +AD+A+++ AA  
Sbjct: 241 TLDRDRIAMSSVGVGITQACLDISKEYAKERRQSSQPIANFQAVQFMLADMAVEVEAARL 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+++ A+  D+ +  ++        A I K +  ++A      A++  GG G  +E    
Sbjct: 301 LTYKAAHLADKGEKITK-------YASIAKLYASEVAQRAATNAVQIHGGYGCTKECPAE 353

Query: 432 RHYRESPANSILLGS 446
           R+YR++   SI +G+
Sbjct: 354 RYYRDAKILSIAVGT 368


>gi|284164436|ref|YP_003402715.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284014091|gb|ADB60042.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 380

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 35/268 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------R 252
           G  LTE   G+D + + +  +K  D  + L+G K F+++      I++  V         
Sbjct: 122 GWALTEPDSGSDASDMDTTAEKDGDE-WVLNGTKQFITNASEAGSILVKAVTDPDAGYDG 180

Query: 253 VGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
           +  F+V PR  ED   +G     + +K+G  ++ T E+   N       LLG+       
Sbjct: 181 ISTFIVDPR--ED---DGFEVTTVWDKMGLNASPTCEIRLENVRLPEDRLLGEEGEGWDQ 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +       LD   +S++ +   LA+     A  Y++ R   G  + +   ++  I D+ 
Sbjct: 236 TKKT-----LDGGRISIAALSTGLAQGAYEHAREYSKEREQFGQPICEFDAIRDKIVDMH 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                A  L+ R A ++D+ +  + E+A A++ A        + A  V  +A++ +GG G
Sbjct: 291 RKTERARLLTHRAARTYDKGEPVTRESALAKLDA-------SEAAREVAEDAVQVLGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y  + +  R YR+  A  + +G G + +
Sbjct: 344 YTTDFAPQRFYRD--AKLMEIGEGTSEI 369


>gi|257487840|ref|ZP_05641881.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331008551|gb|EGH88607.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 387

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 132/307 (42%), Gaps = 20/307 (6%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ + +     +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G       +K+G R + T EL F N        L V  G V  + ++  LD   + 
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDNVEVPEENLLGVLDGGV--IVLMSGLDYERVV 250

Query: 325 VSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A +
Sbjct: 251 LSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQA 310

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R  R++  
Sbjct: 311 CDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKL 363

Query: 440 NSILLGS 446
             I  G+
Sbjct: 364 YEIGAGT 370


>gi|163840883|ref|YP_001625288.1| acyl-CoA dehydrogenase, long-chain specific [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954359|gb|ABY23874.1| acyl-CoA dehydrogenase, long-chain specific [Renibacterium
           salmoninarum ATCC 33209]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 150/389 (38%), Gaps = 71/389 (18%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++ +       L  ++   G+HC      +        H+     + +  Q+ A
Sbjct: 30  PNEERWNEQQHVD--RELWTKAGELGMHCLSIPEEYGGGGGDYRHEA----VVVTEQMRA 83

Query: 149 GHLMSPS-------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
              ++PS       V  A  +    T    ++W PK+ + EY              IG +
Sbjct: 84  ---LAPSFGASLHNVIVAHYLNAYGTEAQKQNWLPKMATAEY--------------IGAI 126

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +   K+    Y ++G K F+++     FI++           V +
Sbjct: 127 AMTEPGTGSDLQSVRTSA-KLDGKEYVINGAKTFITNGFLSNFIVV-----------VAK 174

Query: 261 LLEDGSPNGLC-----------YQRLKN--KIGNRSNATVELEFSNTF----GFLLGDLN 303
             E+G   G+            ++R +N  KIG     T EL F +        L G+ N
Sbjct: 175 TTEEGGSGGISLIAVETDKVEGFRRGRNLRKIGQHGQDTCELFFDDVRVPAENLLGGEPN 234

Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G ++ M+ L    L    M+ + +  S   A+ YA+ R   G  ++     K  +A+
Sbjct: 235 --KGFIQLMQQLGQERLLIGTMAAANIEKSGQLAVQYAKERQAFGKPILSFQNTKFVLAE 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              D  A+ A +F      DE  ++          A   K+W  +    V    ++  GG
Sbjct: 293 --CDTIASIAWAFH-----DECVAKHIVGELDVPTASKAKWWLTEQQNIVADRCLQIFGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+EE  I R + ++    I  G+   M
Sbjct: 346 YGYMEEYPIGRIFADARVQKIYGGTNEIM 374


>gi|148258987|ref|YP_001243572.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146411160|gb|ABQ39666.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 398

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 41/279 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
             L+EK  G+D+AA+    +   D  Y + G K W  +  ++D + + A+     G    
Sbjct: 135 FALSEKDAGSDVAAMACAARLDGDD-YVIDGEKTWISNGGIADVYTLFARTGEAPGARGI 193

Query: 256 -----------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                      F V   +E  +P+ L   RL+N           +  S   G   G   +
Sbjct: 194 SAFVVYPDDPGFSVAERIEVIAPHPLATLRLRN---------CRIPASRRLGAPGGGFKL 244

Query: 305 STGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +      M+ L I+  S   +  G  R +L EA  +A+ R + GG L D  + + A  ++
Sbjct: 245 A------MQTLDIFRASVAAAALGFGRRALDEAQAHAQTRRMFGGTLSDLQMTQAAFGEM 298

Query: 363 ALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A D  AA  L++R A   D  K   + EAA A++ A  T       A  VI  A++  GG
Sbjct: 299 ATDTDAAALLTYRAAWRRDVQKLPTTREAAMAKLAATET-------AQRVIDRAVQMFGG 351

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G  +   +   YRE  A  I  G+     L V    +K
Sbjct: 352 RGVRKGEIVESLYREIRALRIYEGATEVQKLIVAREFQK 390


>gi|328886458|emb|CCA59697.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 383

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 28/304 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS      + T    + W P   S E             +   + +TE   G+D
Sbjct: 94  IIGPYLTS------LGTEEQKRRWLPGFCSGE-------------IVTAIAMTEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I +  +   D  + L+G K F+S+  ++D  +++A+     G   +  L+ +    G
Sbjct: 135 LQGIRTTAEDHGDH-WILNGSKTFISNGILADLVVVVARTTPEGGAHGLSLLVVERGAEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +KIG +S  T EL F +       LLG+LN +   +        L  A+  ++
Sbjct: 194 FERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGELNGAFVHLMTNLAQERLAIAVAGIA 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           G    L     Y + R   G  L     ++  IA++A + A       R      E    
Sbjct: 254 GAEHLLELTTRYVKEREAFGRPLARLQHIRFEIAEMATECAVTRTFVDRCI----EEHCD 309

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + A    + A + K+W  ++   V    ++  GG GY+ E  +AR Y +    +I  G+
Sbjct: 310 QDGAGLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEFPVARAYTDGRIQTIYGGT 369

Query: 447 GNAM 450
              M
Sbjct: 370 TEIM 373


>gi|301754904|ref|XP_002913268.1| PREDICTED: LOW QUALITY PROTEIN: isovaleryl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 425

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 49/296 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 149 EKYLPKLISGEY--------------IGALAMSEPSAGSDVVSMKLKAEKKGDH-YILNG 193

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  I+ A+ +       VP        ++E G P G    +  +K+G R
Sbjct: 194 NKFWITNGPDADILIIYAKTDPAA----VPASRGITAFIVEKGMP-GFSTSKKLDKLGMR 248

Query: 283 SNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            + T EL F        N  G L   + V    ++  ++++    A   +  M+  L   
Sbjct: 249 GSNTCELIFEDCKVPAVNILGHLSKGVYVLMSGLDLERLVL----AGGPLGLMQAVLDHT 304

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  +    +M+  +AD+   + A     + +A + D+    +++ A   +
Sbjct: 305 IPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDQGHCTAKDCAGVIL 364

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  +  + A  V  + ++C G +GYI +  + R  R++    I  G+G + V
Sbjct: 365 -------YSAECATQVALDGIQCFGANGYINDFPMGRFLRDAKLYEI--GAGTSEV 411


>gi|118466488|ref|YP_884079.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167775|gb|ABK68672.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 41/310 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++ L  T    + + P++ S E   T             + LTE  GG+D+
Sbjct: 83  MGGHTVVAKLLTLFGTEDQKRAYLPRMASGEIRAT-------------MALTEPGGGSDL 129

Query: 212 A--AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLE 263
              + T+     SDG+       W  ++  S    +L + + +      PR      LL 
Sbjct: 130 QNMSTTALPDPDSDGLVINGAKTWISNARRSGLIALLCKTDPKA----TPRHKGISILLV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--L 318
           +  P GL   R   K+G +   + EL F N       +LG +    G  + MK L    +
Sbjct: 186 EHRP-GLTVSRDLPKLGYKGVESCELSFDNFRAPATAVLGGV-AGQGFSQMMKGLETGRI 243

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A 
Sbjct: 244 QVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAE 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +    EA  A++ A        ++A  +   A+   GG GY +E  + R++R++P
Sbjct: 304 RYDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAP 356

Query: 439 ANSILLGSGN 448
              +++G G 
Sbjct: 357 L--MIVGEGT 364


>gi|94502143|ref|ZP_01308643.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94425714|gb|EAT10722.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 389

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/287 (19%), Positives = 124/287 (43%), Gaps = 31/287 (10%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S ++              IG L ++E   G+D+ ++  + ++  D  
Sbjct: 110 SPEQKAKYLPKLISGDH--------------IGALAMSEPNAGSDVVSMKLRAEQKGDKF 155

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
               G  W  + P +D +++ A+ +   G   +   + +    G    +  +K+G R + 
Sbjct: 156 ILNGGKMWITNGPDADVYVIYAKTDFEKGPHGITAFIVERDFPGFSRGQKLDKLGMRGSN 215

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYA 339
           T EL F +     +   NV  G    +K+L+  LD   + +SG     M+  +   + Y 
Sbjct: 216 TCELIFEDC---EVPAENVLGGLNNGVKVLMSGLDYERVVLSGGPTGIMQACMDVVVPYI 272

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD+   + A  +  + +A + D  ++  ++AA   +    
Sbjct: 273 HDRQQFGKSIGEFQLVQGKIADMYSTMNACKSYLYMVATACDRGETTRKDAAGVIL---- 328

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +  + A  +  +A++ +GG+GYI + +  R  R++    I  G+
Sbjct: 329 ---YTAEKATQMALDAIQLLGGNGYINDFATGRLLRDAKLYEIGAGT 372


>gi|726095|gb|AAC52329.1| long-chain acyl-CoA dehydrogenase [Mus musculus]
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 217

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    R  +K+G ++  T EL F +       LLG+ 
Sbjct: 218 VTNREARWPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEE 277

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y ++R   G  +     ++
Sbjct: 278 NKGFYYLMQELPQERLLI------AELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQ 331

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  E +
Sbjct: 332 HKLAELKTHICVTRAF-------VDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECV 384

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|110634822|ref|YP_675030.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110285806|gb|ABG63865.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 406

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 46/275 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           K + PK+ S E+              IG  GLTE   G+D  ++ ++ +KI DG Y L G
Sbjct: 133 KKYLPKLASGEF--------------IGCFGLTEPDAGSDPGSMKTRAEKI-DGGYRLVG 177

Query: 231 HK-WFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K W  ++P++D F++ A+    + ++  F++ + ++     GL   ++  K+  R++ T
Sbjct: 178 SKMWISNAPIADVFVVWAKSAAHDNQIRGFVLEKGMK-----GLSAPKIGGKLSLRASIT 232

Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
            E+           LL +++   GP         L+ A   +S   +  AE     A  Y
Sbjct: 233 GEVVMDGVEVPEDALLPNVSGLKGP------FGCLNRARYGISWGVMGAAEDCWHRARQY 286

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    + ++ +AD+  +IA     S R+    DE K       +A  M  
Sbjct: 287 GLERQQFGRPLAATQLFQKKLADMQTEIALGLQASLRVGRLMDEHK-------FAPEMIS 339

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I K   C  A  +   A +  GG+G   E  + RH
Sbjct: 340 IVKRNNCGKALDIARMARDMHGGNGIQIEYQVMRH 374


>gi|332665924|ref|YP_004448712.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334738|gb|AEE51839.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 120/287 (41%), Gaps = 31/287 (10%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + F  +       P   +   IG   L+E   G+D  +  +    + D  Y L+G K
Sbjct: 96  WGLETFGSDAQKAKYLPKLASGEWIGSFCLSEPEAGSDATSQRTTAVDMGD-YYLLNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   S   +++AQ    +G   +  L+ + S  G+     ++K+G RS+ T  + +
Sbjct: 155 NWITNGGTSKLHLVMAQTNPELGSRGINCLIVETSSEGVAIGAKEDKLGIRSSDTHTIMY 214

Query: 292 SNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++             FGF      +S G        I + +  + ++G    LA A  Y+
Sbjct: 215 TDVKVPKENRIGEDGFGFKFAMKTLSGGR-------IGIAAQALGIAGGSYELALA--YS 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +     +   +AD+A++I AA  + +R A   D+       +A A++    
Sbjct: 266 KERTTFGKPIHQHQAIAFKLADMAMEIEAAKLMVYRAAWLKDQHMDYVAASAMAKL---- 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +  ++A     EA++  GG G+++E  + R  R++    I  G+
Sbjct: 322 ---YASEVAMRHSVEAVQIHGGYGFVKEYHVERLMRDAKITQIYEGT 365


>gi|119473937|ref|XP_001258844.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119406997|gb|EAW16947.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 441

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 20/179 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K  DG  Y ++G  KW  +   SD   M  +  G     +
Sbjct: 160 IAITEPEAGSDVANITTTATKTPDGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGAAGL 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              LVP     G P G+  +RLK   G  +  T  +E  +     +G+L    G  + M+
Sbjct: 220 SVILVPL---KGHP-GVTMRRLKVS-GQITGGTTYIELDDV-KVPVGNLIGREG--DGMR 271

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           I++       L  A+      RV+LA A  Y  +R   G  L+DQPV++  +A    ++
Sbjct: 272 IIMTNFNHERLTIAVGVTRQARVALAAAFQYTMKREAFGKTLMDQPVVRHRLAKAGAEL 330


>gi|115359334|ref|YP_776472.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115284622|gb|ABI90138.1| isovaleryl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
          Length = 393

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDLDAGPRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGRSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|330953385|gb|EGH53645.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 387

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|304313042|ref|YP_003812640.1| Acyl-CoA dehydrogenase, probably Isovaleryl-CoA dehydrogenase
           [gamma proteobacterium HdN1]
 gi|301798775|emb|CBL47008.1| Acyl-CoA dehydrogenase, probably Isovaleryl-CoA dehydrogenase
           [gamma proteobacterium HdN1]
          Length = 389

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  + L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGD-RFILNGNKMWITNGPDANTYVIYAKTDIEKGPHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + NV     E +K+L+  
Sbjct: 189 TAFIVERDFPGFSRPQKLDKLGMRGSNTGELVFQDC---EVPEENVLGKVNEGVKVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   L   I Y   R   G  + +  +++  IAD+     A+ A 
Sbjct: 246 LDYERVLLSGGPTGVMLACLDVVIPYVHERKQFGQAIGEFQLIQGKIADMYAVTNASRAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   + A      C         +A++ +GG+GYI E    R
Sbjct: 306 LYAVAQACDRGETTRKDAAALILYAAENATRCA-------LDAIQVLGGNGYINEYPTGR 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 LLRDAKLYEIGAGT 372


>gi|320010671|gb|ADW05521.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 388

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 52/316 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAI-TSQGQKISDG 224
           T    + W PK+ + E              A+G  GLTE  GG+D     T+     + G
Sbjct: 105 TEEQKRQWLPKLCAGE--------------ALGAFGLTEPDGGSDAGGTRTTAVLDEAAG 150

Query: 225 IYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRL 275
            + ++G K F+++  +D    + +  V GR       +   +VP     G+P G      
Sbjct: 151 EWVINGSKCFITNSGTDITELVTVTAVTGRKENGAPRISAIIVP----SGTP-GFTVAAP 205

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G  ++ T EL FS+       LLG+           + L  LD   +++S +   L
Sbjct: 206 YSKVGWNASDTRELSFSDVRVPAANLLGEEGRGYA-----QFLRILDEGRIAISALSTGL 260

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A     E++ YA+ RH  G  +     ++  IAD+    A    + +R      +A SR 
Sbjct: 261 AQGCVDESLKYAKERHAFGKPIGANQAIQFKIADMETR-AHMARIGWR------DAASRL 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 +  A I K +   +A     +A +  GG G++ E  +AR +R+S    + +G G
Sbjct: 314 VAGEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGEG 371

Query: 448 NAMVLDVLNLLEKGTN 463
            + V  +L   E G +
Sbjct: 372 TSEVQRMLIARELGMD 387


>gi|240171232|ref|ZP_04749891.1| acyl-CoA dehydrogenase FadE [Mycobacterium kansasii ATCC 12478]
          Length = 387

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 32/286 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W P++ S +               + + +TE   G+D+  I +    + DG  Y L+G K
Sbjct: 117 WLPRVISGD-------------AVLAIAMTEPGAGSDLQGIRTTA--VRDGSHYVLNGSK 161

Query: 233 WFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRSNATVEL 289
            F+S+    D  I++ + +   G   V  ++   D S +G    R+  KIG     T EL
Sbjct: 162 TFISNGTHCDLLIIVTKTDPAAGAAGVSLIVAETDESLHGFERGRVLEKIGQHGQDTREL 221

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS-VSGM-RVSLAEAIHYARRRHV 344
            FS+       LLGD N   G  + M+ L      I S  +G+   ++ EAI Y R+R  
Sbjct: 222 FFSDMRVPVANLLGD-NEGLGFYQLMEQLARERLIIASQCAGLAECAVLEAIRYTRQREA 280

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G     +P++K        ++A   A +  +  + D    +  +       A + K   
Sbjct: 281 FG-----RPLIK--FQHSRFELAQLKAETLSIKTTVDHCVQQYIDGNNDPATASMAKLIA 333

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              A  ++   ++  GG GY+ E  IAR Y  +    I  G+   M
Sbjct: 334 ADKAVDIVDRCLQFFGGYGYMMEYPIARAYAAARVTKIYGGTSEIM 379


>gi|148560349|ref|YP_001259225.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|294852648|ref|ZP_06793321.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|148371606|gb|ABQ61585.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|294821237|gb|EFG38236.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|120402973|ref|YP_952802.1| butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119955791|gb|ABM12796.1| Butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 397

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 32/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ +   DG Y + G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRARDNGDGTYTIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVE 310
             FL+  P    + +P GL      +K+G +   T EL F    G+  G  ++    P +
Sbjct: 189 TAFLIEKPTGFGEVAP-GLTIPGKLDKLGYKGIDTTELIFD---GYRAGATDILGEAPGQ 244

Query: 311 D-MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              +++  ++   ++VS      G+R +   A+ YA++R   G  + +   +   +A++A
Sbjct: 245 GFFQMMDGVEVGRVNVSARACGVGIR-AFELAVRYAQQRSTFGKPIAEHQAIAFQLAEMA 303

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  +    A   D  +          + A + KY+  ++   V  ++    GG G
Sbjct: 304 TKVEAAHLMMVNAARLKDSGERND-------VAAGMAKYFASEVCAEVTQQSFRIHGGYG 356

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  I R  R++P   +L+G G + +
Sbjct: 357 YSKEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|21304467|gb|AAM45392.1| putative acyl-CoA dehydrogenase [Propionibacterium freudenreichii
           subsp. shermanii]
          Length = 378

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPR 260
           +TE   G+    +++   +    +Y L+GHK F++S M   + +++A+    +G +    
Sbjct: 123 MTEPSAGSSWDDMSTTYSRKGGKVY-LNGHKTFITSSMKVPYLVVMARDADNMGTY--TE 179

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+  + L +K+G R ++  ++ F N        FG    + N     V+D  
Sbjct: 180 WFVDMSLPGITKEPL-HKLGLRMDSCADIYFDNVELREEDLFG---TEGNGFKRGVKDFD 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   + A+ +      +  +A  YA +R   G  +  + +++   AD+ +DI       
Sbjct: 236 -LERFEVAMTNYGTAYCAFEDAAKYANQRVQGGEAIARKQLIQLKFADMKVDIT------ 288

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   E   +++     R    + KY+C   A  V+  A++ + G G   E  + R 
Sbjct: 289 -NMRNMLYEIAWKADNDQLGRGDCSMAKYYCSHAAARVVDNALQTLAGVGVTGEHRVQRF 347

Query: 434 YRESPANSILLGSGNAMVL 452
           YR+   + +  G+   M+L
Sbjct: 348 YRDLRVDRVSGGTDEMMIL 366


>gi|15599631|ref|NP_253125.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9950669|gb|AAG07823.1|AE004858_1 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 127 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 185 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 244 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 294 TEIQVGRVFVDRCMELHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 347 FMWEYPVARAWADARVQRIYAGTNEIM 373


>gi|85710458|ref|ZP_01041522.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           NAP1]
 gi|85687636|gb|EAQ27641.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           NAP1]
          Length = 404

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + +  +   DG + +SG K W  ++P +D F++ A+ E   G  + 
Sbjct: 147 FGLTEPDAGSDPAGMKTYAKMDGDG-FVISGSKTWISNAPFADVFVVWAKSEAHDGA-IR 204

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ KI  R++ T  +   E       LL ++    GP       
Sbjct: 205 GFILEKGM-KGLSAPKIEGKISLRASPTGMIMMDEVKLPADALLPNVQGLKGP------F 257

Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE  +H AR+    R   G  L    + ++ +AD+  DIA   
Sbjct: 258 GCLNRARYGISWGAMGAAEFCMHAARQYGLDRRQFGRPLAGTQLYQKKLADMLTDIALGL 317

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE +       ++  M  I K      A  +   A +  GG+G  EE  +
Sbjct: 318 QASLRVGRLMDENR-------FSPDMISIVKRNNVGKALDIARTARDMHGGNGISEEYQV 370

Query: 431 ARH 433
            RH
Sbjct: 371 IRH 373


>gi|313106966|ref|ZP_07793169.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879671|gb|EFQ38265.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 378

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQVGRVFVDRCMELHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370


>gi|296170298|ref|ZP_06851889.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895021|gb|EFG74740.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 397

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 32/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++  +  DG Y ++G K +L++  S   I  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRAVRHPDGDYTINGQKMWLTNGGSSTLIAVLVRTEEGADKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
             FLV  P    +  P GL      +K+G +   T EL F    G+     +V  G P +
Sbjct: 189 TAFLVEKPTGFGEVVP-GLVIPGKIDKLGYKGIDTTELVFD---GYRASADDVLGGAPGQ 244

Query: 311 D-MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             ++++  ++   ++VS      G+R +   A+ YA++RH  G  + +   +   +A++A
Sbjct: 245 GFVQMMDGIEVGRVNVSARACGVGIR-AFELAVRYAQQRHTFGKPIAEHQAIAFQLAEMA 303

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  +    A   D  +          + A + KY   +    V  ++    GG G
Sbjct: 304 TKIEAAHLMMVNAARLKDSGERND-------VAAGMAKYLASEYCTEVTQQSFRIHGGYG 356

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  I R  R++P   +L+G G + +
Sbjct: 357 YSKEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|319948736|ref|ZP_08022857.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319437638|gb|EFV92637.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 400

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 45/350 (12%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           SF   V      +R + +   A  EAG  +S  V ++     + TP + +   P    R 
Sbjct: 70  SFPEEVGGGGGDMRDSIIVCEALHEAG--VSGGVFASLFTCGIATPHLAQSGRPDQIDRW 127

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
             PT    M  +     L +TE  GG+D+  +T+  ++  D  + ++G K +++S     
Sbjct: 128 VRPTLAGDMIGS-----LAITEPGGGSDVGHLTTTARRDGD-HFVVNGAKTYITSGTRAD 181

Query: 243 FIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           F++ A   G     G   V  L+      G        K+G R++ T EL F+       
Sbjct: 182 FVVTAVRTGGEDLPGASGVSLLVIPTDTPGFHRSAPLEKLGWRASDTAELTFT------- 234

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVS--GMRVSLAE------------AIHYARRRHVS 345
            D  V   PVE++        A +++   G R++LA              + + R R   
Sbjct: 235 -DCRV---PVENLVGAENEGFAQIAIGFVGERIALAAQGYSHAQRCLDLTLAWVRERETF 290

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L+ +  ++  + ++A  I  A   + R A+          E  +A+  A     W  
Sbjct: 291 GRPLLSRQAVQNTVTEMARRIDVARTYTHRCADLAVAGHDAVAEVCFAKNTAVECAEW-- 348

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                V  +A++  GG G++ E  ++R YR+     + +G G   +L  L
Sbjct: 349 -----VANQAVQLFGGLGFMAESEVSRQYRD--VRLLGIGGGTTEILTTL 391


>gi|302551599|ref|ZP_07303941.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469217|gb|EFL32310.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 49/276 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + S  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTAAPTAEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F V     D    G    R  +K+G +++ T EL F         D+ V   PV
Sbjct: 184 RHGISLFAV-----DTKSEGYSVGRKLDKLGLKTSDTAELAFV--------DVKV---PV 227

Query: 310 EDM-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354
           ED+     K   YL   + S       G       A+ +A++ +V    +  +PV     
Sbjct: 228 EDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQERTVFGKPVSHFQN 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI  
Sbjct: 287 TKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDR 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 340 CLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|284992309|ref|YP_003410863.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284065554|gb|ADB76492.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 21/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVG 254
           + +TE   G+D+  I +  +   DG + LSG K F+++ + +D  I++A+      G  G
Sbjct: 124 IAMTEPAAGSDLQGIRTTARPDGDG-WLLSGSKTFITNGINADLVIVVARTAPDAPGSRG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             L+  ++E   P G    R   KIG ++  T EL F         LLG  N     + +
Sbjct: 183 LSLL--VVERDMP-GFTRGRNLAKIGLKAQDTAELYFDGVRVPAENLLGTENRGFAHLME 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+ +V+     LA+ + Y     V+G     +PV     +   L   A   
Sbjct: 240 NLPQERLSIAVGAVAAAETVLAQTVEY-----VTGRTAFGRPVGSFQNSRFVL---AELQ 291

Query: 372 LSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +A +F DE   + +      + A + KYW  ++   V    ++  GG GY++E  +
Sbjct: 292 TEVTIARTFVDECVRQLDRGELTPVDAAMAKYWTTELQNKVADRCLQLHGGYGYMDEYPV 351

Query: 431 ARHYRESPANSILLGSGNAM 450
           ++ +R++    I  G+   M
Sbjct: 352 SKAWRDARIQPIYGGTNEIM 371


>gi|219556013|ref|ZP_03535089.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T17]
 gi|289568118|ref|ZP_06448345.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T17]
 gi|289541871|gb|EFD45520.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T17]
          Length = 388

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 42/287 (14%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARR 341
            F N       +LG   +  G  + MK    L++  + V+   + +A A     + YA++
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMK---GLETGRIQVAARALGVATAALEDLLAYAQQ 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A    
Sbjct: 273 RESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA---- 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               ++A  +   A+   GG GY  E  + R++R++P   ++LG G 
Sbjct: 329 ---SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MILGEGT 370


>gi|71282496|ref|YP_269431.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71148236|gb|AAZ28709.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 138/317 (43%), Gaps = 59/317 (18%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           MS +     ++  + +    + + PK+ S EY             A G  LTE   G+D 
Sbjct: 89  MSVTNMVGEVIESVASEAQKEKYLPKLCSGEY------------AAGGFCLTESGAGSDP 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GR-VGCFLVPRLLED 264
           + + ++     D  + ++G K +++S   +  F++ A  +     G+ + CFLV    E 
Sbjct: 137 SGMKTKAILEGDE-WVINGAKQYITSGEYAGVFVLWAVTDPSAPRGKGISCFLV----EA 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
            +P GL     + K+G  ++AT E+ F N       L+G LN      +  K+      A
Sbjct: 192 DAP-GLIISPAEKKMGQHASATNEVVFDNCRLPKDALMGTLN------QGFKV------A 238

Query: 322 IMSVSGMRVSLAE--------AIHYAR----RRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++G R+ +          AI +AR     R   G  +     ++  +AD   D+ AA
Sbjct: 239 VSELAGGRIGIGSLSLGIGLAAIDFARDYVNERQQFGQKIAKFQGIQWMLADAYTDLEAA 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A+  D+ +   +EA+ A++ A        + A  V   A++ +GG+GYI++  
Sbjct: 299 RLLLMNAADKKDKGQPFGKEASMAKLFAS-------EKANQVCYTALQLMGGAGYIKDYP 351

Query: 430 IARHYRESPANSILLGS 446
           + R+ R+    SI  G+
Sbjct: 352 LERYARDVRVASIYEGT 368


>gi|297200146|ref|ZP_06917543.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197713403|gb|EDY57437.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 33/272 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++  S+ + ++A 
Sbjct: 119 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGDH-WILNGVKRWITNAGESEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+ F N       ++G+    
Sbjct: 178 TDPSKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEG-- 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGVAQGAFDYAKGYVQERKQFGKAIADFQGIQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVIAE 414
           D+A+ I+AA AL+++ A            AA  R+   +T      K +   +A  V  +
Sbjct: 293 DMAMKISAARALTYQAA------------AASERLDKDLTFQGAAAKCFASDVAMEVTTD 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ +GG GY  +  + R  R++    I  G+
Sbjct: 341 AVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|31982520|ref|NP_031407.2| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Mus musculus]
 gi|12836858|dbj|BAB23838.1| unnamed protein product [Mus musculus]
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 217

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    R  +K+G ++  T EL F +       LLG+ 
Sbjct: 218 VTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEE 277

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y ++R   G  +     ++
Sbjct: 278 NKGFYYLMQELPQERLLI------AELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQ 331

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  E +
Sbjct: 332 HKLAELKTHICVTRAF-------VDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECV 384

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|254818283|ref|ZP_05223284.1| FadE3_2 [Mycobacterium intracellulare ATCC 13950]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 33/284 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E   T   PM    V   + LTE  GG+D+  + +       G   ++G K ++S+  
Sbjct: 98  TEEQKRTYLPPMAGGEVRATMALTEPGGGSDLQNMATTALSDDAGGLVINGSKTWISNAR 157

Query: 240 SDAFIML-----AQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               I L        + R  G  +V  L+E G   GL   R   K+G +   + EL F N
Sbjct: 158 RSGLIALLCKTDPNTKPRHTGISIV--LVEHGP--GLTVSRDLPKLGYKGVESCELSFDN 213

Query: 294 -------TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
                    G + G+     G  + MK L    +  A  ++     +L +A+ YA++R  
Sbjct: 214 YRVPETAILGGVAGE-----GFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRES 268

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A       
Sbjct: 269 FGQPIWQHQSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEAGMAKLFA------- 321

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            ++A  +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 322 SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 363


>gi|294812777|ref|ZP_06771420.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326441272|ref|ZP_08216006.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325376|gb|EFG07019.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 388

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 27/275 (9%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--G 254
            GLTE  GG+D     T+  +  + G + ++G K F+++  +D    + +  V GR   G
Sbjct: 125 FGLTEPEGGSDAGGTRTTAVRDEAAGEWVINGSKCFITNAGTDITGLVTVTAVTGRTPEG 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             L+  ++      G       +K+G  ++ T EL F         L+G+          
Sbjct: 185 KPLISSIIIPSGTPGFTVAPAYSKVGWNASDTRELAFDGVRVPLANLVGEEGRGY----- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + L  LD   +++S +   LA     E++ YAR+RH  G  +     ++  IAD+ +  
Sbjct: 240 AQFLRILDEGRIAISALATGLAQGCVDESVAYARQRHAFGRPIGANQSIQFKIADMEMRA 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A          + +A SR       +  A + K +   +A     +A +  GG G++ 
Sbjct: 300 HMARV-------GWRDAASRLVLGEPFKKQAALAKLYSSTVAVDNARDATQIHGGYGFMN 352

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 353 EYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 385


>gi|167566829|ref|ZP_02359745.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 390

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 16/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGRVG 254
           L +TE  GG+D+AA+ ++  +   G Y ++G K F++S +   +  +A       +G  G
Sbjct: 130 LAITEPGGGSDVAALRTRAVR-DGGHYVVNGEKVFITSGIRADYYTVAVRTDPSAQGAKG 188

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             L   LL +G   GL    L+ K+G  ++ T  L F +        +    G    +  
Sbjct: 189 LSL---LLVEGDTPGLSKTPLE-KMGWWASDTAHLRFDDCRVPAANLIGAEGGGFPLVMQ 244

Query: 315 LIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L+   ++ S +    V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A
Sbjct: 245 NFNLERFSLAASALGFAEVCYEDALDWARQRRTFGQRIADHQVIRHKLVDMAMRIDATRA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              + A   D    R+     +  M    K +  +        A++ +GG GY+      
Sbjct: 305 WLEQCAWQIDHLDKRAPTLVASICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPE 361

Query: 432 RHYRESPANSILLGSGNAM 450
           R YRE   N I  G+   M
Sbjct: 362 RIYREVKVNMIGGGAEEIM 380


>gi|262198062|ref|YP_003269271.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081409|gb|ACY17378.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 392

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 30/245 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
            GLTE   G+D   + +  +K +DG Y LSG K W  +SP++D F++ A+   +G++  F
Sbjct: 136 FGLTEPDAGSDPGGMRTTAKKTADG-YVLSGTKTWITNSPIADVFVVWAKSDPDGKIRGF 194

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           ++     D    GL   +++ K+  R++ T ++   +       LL ++    GP     
Sbjct: 195 VL-----DKGMKGLTAPKIEGKMSMRASITGQIAMDDVAVPESALLPEVTGLRGPFG--- 246

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAA 368
               L+ A   ++   +  AE   +A R++     +  +P     ++++ +AD+  +IA 
Sbjct: 247 ---CLNKARFGIAWGALGAAEFCWHAARQYTLDRTMFGRPLAATQLIQKKLADMQTEIAI 303

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 R     DE     E  +       + K      A  +   A +  GG+G +++ 
Sbjct: 304 GLQACLRAGRMMDEGTLAPEAIS-------LIKRNSAGKALDIARLARDMHGGNGIVDDF 356

Query: 429 SIARH 433
            + RH
Sbjct: 357 HVIRH 361


>gi|195325801|ref|XP_002029619.1| GM24997 [Drosophila sechellia]
 gi|194118562|gb|EDW40605.1| GM24997 [Drosophila sechellia]
          Length = 419

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D++ I ++ +K  D  Y ++G K W  +  +++ + +LA+      C     
Sbjct: 156 VTEPGAGSDVSGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  SP GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERDSP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +   +
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGV-ETS 329

Query: 371 ALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  E  
Sbjct: 330 RLAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSEYP 382

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 383 VEKLMRDAKIYQIYEGT 399


>gi|16944400|emb|CAD11366.1| conserved hypothetical protein [Neurospora crassa]
          Length = 697

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 162/418 (38%), Gaps = 71/418 (16%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLL--VALIANFPSVVHK---ELELLGEYVLSCTAQEL 73
           +++ F   QP   I  N +  D  L  +A +   PS++ K   E+  LG+ VLS    + 
Sbjct: 6   ANTGFIQQQP---IIKNQFHEDVSLQRIAKLYLPPSLLEKVTPEISRLGDAVLSQQIFDW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
              A  NTP L   G       K E      W  L      +G+    +D +  P     
Sbjct: 63  ITDAERNTPYLRGSGRDAFGRPKQELIVTEGWRKLQEFGFANGVVAINYDSTSSPSPNGP 122

Query: 132 AHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALM----TTPRVHKDWAP---KIFSREY 183
             + I+  R +L  +    + M P+        L+    TTP +  + +     +F   Y
Sbjct: 123 YSRLIQFIRCHLW-EASCANTMCPAAMQDGAARLLQRHLTTPPLAANLSETERSVFQNAY 181

Query: 184 DP-TNKAPMQKTSVAIGLGLTEKRGGTDIA-------------------AITSQGQKISD 223
           D  T++ P    +   G  +TE+ GG+D++                    +  + + +  
Sbjct: 182 DHLTSRDPAY--TWTSGQWMTERTGGSDVSQTETVATYSPFPAGRQQPVPLACKEENMPL 239

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLL---EDGSP----------- 267
           G + +SG KWF S+  S   I+LA+    +G   F  P      E  SP           
Sbjct: 240 GPWSISGFKWFSSATDSQMTILLAKTRPGMGVSAFFAPMRRWNPELVSPTCTGPGATGGT 299

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+   RLK+K G  S  T ELE  +  G+L+G        ++++  ++ +  A  +V
Sbjct: 300 ELNGVTISRLKSKFGTVSLPTAELELKDMRGWLIGKEGEG---IKEISTILNITRAHTTV 356

Query: 326 SGMRV---SLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSF 374
           S M      +  A  YA  R  +G        L   P+  R +AD+  +      L+F
Sbjct: 357 SSMGYLGRGIGVAKAYALVREAAGVGKGRRLPLYKHPLHMRTLADLTAEYHGLMLLTF 414


>gi|229087517|ref|ZP_04219649.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-44]
 gi|228695764|gb|EEL48617.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-44]
          Length = 600

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G        
Sbjct: 156 LTEPGSGSDALGARTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGE---HFTA 212

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            ++E   P G+     + K+G + ++T  L   +       +LG+  +  G V    IL 
Sbjct: 213 FIVEKEYP-GVSTGPEEKKMGIKCSSTRTLILEDALVPKENVLGE--IGKGHVIAFNILN 269

Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                  + +V   + +L  +  YA +R      +   P+++  +A++A  I AA +  +
Sbjct: 270 IGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESSVY 329

Query: 375 RLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           R    F+   S  +EE            A YA I   + K +  ++   V+ E ++  GG
Sbjct: 330 RTVGLFESHMSTLTEEQVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYVVDEGVQIHGG 388

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ E  I R YR+S  N I  G+
Sbjct: 389 YGFMAEYEIERMYRDSRINRIFEGT 413


>gi|284033278|ref|YP_003383209.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283812571|gb|ADB34410.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 396

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 27/263 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++  K  D  Y ++G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPGCGSDVAAIKTKAVKNGDS-YTVNGQKMWLTNGGSANLVAVLVKTDEGADSVYKNM 187

Query: 254 GCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
             FLV +    G  + GL       K+G +   T EL F       G +LG   V     
Sbjct: 188 TTFLVEKEPGFGEVDQGLTVPGKIEKMGYKGVDTTELIFDGYRIDAGQILG--GVPGKGF 245

Query: 310 EDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M   + +    ++  G    R +    I YA++R   G  + +   +   +AD+A+ +
Sbjct: 246 YQMMDGVEVGRVNVAARGCGVARRAFELGISYAQQRETFGRKIAEHQAVLFRLADMAVKV 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L  + A   D A SR++        A + KY   +    V+ ++    GG G+ +
Sbjct: 306 EAAHELMVKAARKKD-AGSRND------FEAGVAKYLASEYCSQVVEDSFRIHGGYGFSK 358

Query: 427 ERSIARHYRESPANSILLGSGNA 449
           E  I R YRE+P   +L+G G A
Sbjct: 359 EYEIERLYREAPM--LLIGEGTA 379


>gi|73537660|ref|YP_298027.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72120997|gb|AAZ63183.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 400

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 33/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+A I+ +  +  D  + ++G K++ +      FI+   V  R    + P+ 
Sbjct: 135 LSEPNAGSDVANISCRAVRDGDD-WLITGSKYWCTFADEADFIL---VICRTDPVIDPKA 190

Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEF-------SNTFGFLLGDLN 303
              G        P G   + +K     KIG     T EL F       S   G       
Sbjct: 191 RHKGLSAFMVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDGCRVPHSKMVGEEGKAFY 250

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++T  +E  +      +A  S+   + SL ++I YA+ R+  G  + +   ++  +AD+A
Sbjct: 251 LTTAGLETARA----HTAARSIGLAQGSLEDSIQYAKDRNQFGNPIGNFQAIRFKLADMA 306

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+ AL + +    DE      EA+  ++ A        +M   V +E ++  GG+G
Sbjct: 307 TQIEASRALLYTVCERIDEGVRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 359

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y    +  R++R++    I  G+
Sbjct: 360 YTTHFAAERYWRDARLTKIFEGT 382


>gi|256827299|ref|YP_003151258.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
 gi|256583442|gb|ACU94576.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
          Length = 386

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 34/273 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG---- 251
           +A  L +TE   G+D   + ++  + S+ ++ L G K F+ +      IM+A ++     
Sbjct: 119 LAFSLAVTEPAAGSDTMGMKTKVTRRSNRLF-LDGRKTFVENGEYAPQIMVAALDETNTQ 177

Query: 252 -----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
                 +  +LVP        NG+    + +KIG +     +L FS       + L D  
Sbjct: 178 ATERPHLSFWLVPL-----DTNGIEAYPI-DKIGQKILPFADLSFSQVELDPSWRLDDTG 231

Query: 304 VSTGP-----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           ++  P      E  + L+   S  M+    + +L +A+H+A++R   G  + D   +++ 
Sbjct: 232 MAGFPRLFHVFEISRTLVCAQSLGMA----QAALEDAVHHAQQREAFGQAIGDFQQIEQL 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + D+ +++ A  AL +  A +FD + S        R+   + K +  + A  V + AM+ 
Sbjct: 288 LVDMEINVRAMRALVYEAAWAFDASCSDK------RLAVALMKRFVPQAACDVASRAMQI 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +GG GY      +  +++   N I  G+   MV
Sbjct: 342 LGGRGYTTYERASWIWQDCRGNQIADGTDQIMV 374


>gi|311747114|ref|ZP_07720899.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578821|gb|EAZ82985.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 184 DPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD 241
           D  NK   +  S  IG  G+TE+  G+D  A+     K+  G Y L+G K +++ +P+ +
Sbjct: 107 DQKNKYLKKLISGTIGAFGITEEGSGSDTYALEMTADKVEGG-YILTGEKHYITLAPICE 165

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------ 295
             ++ A    ++G + +   + D +  G     +++K+G R+     L F N F      
Sbjct: 166 IAVVFATTNAKLGKWGITAFIVDNTMEGFTVSEVRDKVGMRTTPMGNLYFKNCFVPDENR 225

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G     L++ +  +E  +  I+       +  M   L  +I YA  R   G  +     
Sbjct: 226 LGREGSGLSLFSSAMESERGYIFAS----QIGRMEKQLELSIDYANNRQSFGQSIGKNQS 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IA++ L +  +    +++A          +EAA A++           ++ A +  
Sbjct: 282 ISNRIANMRLRLETSKMHLYKVAYLDHSDLPLMKEAAMAKLY----------ISEAFVES 331

Query: 415 AMECI---GGSGYIEERSIARHYRESPANSILLGSGN 448
           +++ I   G  G + E  + R  R+     I  G+ +
Sbjct: 332 SLDFIRIFGAKGVVTEYEVERDLRDGLGGLIYSGTSD 368


>gi|306843342|ref|ZP_07475946.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO2]
 gi|306286458|gb|EFM58054.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO2]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +       V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTGFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|121714677|ref|XP_001274949.1| acyl-CoA dehydrogenase [Aspergillus clavatus NRRL 1]
 gi|119403103|gb|EAW13523.1| acyl-CoA dehydrogenase [Aspergillus clavatus NRRL 1]
          Length = 434

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 22/289 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +   LG+TE + G+D+A+I++  QK  D ++ ++G K ++++ +   +      
Sbjct: 148 PVIRGEIRFCLGITEPQAGSDVASISTTAQK-QDNVFIVNGTKQWVTNGLFAHYCTAVVR 206

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
            G  G   +  L+      G+    + +  G  S+    L+F N       LLG+LN   
Sbjct: 207 TGGAGKAGISLLVIPLDSKGVSRTEIHSS-GVASSGCAALKFDNVEVPAENLLGNLN--- 262

Query: 307 GPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E  ++++  L+   + ++G      R+ L ++  +A  R   G  LID+  ++   A
Sbjct: 263 ---EGFQLIMSSLNHERLWIAGNCLRLARICLEDSYKHALTRQTFGKPLIDRQAIRLKFA 319

Query: 361 DIALDIAAATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           ++ + I +A AL   L     + F  A    E  +    +  + K    +     + E+ 
Sbjct: 320 NVGMQIVSAYALLESLVQVRESGFKRATDIDELGSNIGGLCALAKVSAGRATELAVRESQ 379

Query: 417 ECIGGSGYIEERSIARHYRESPANSIL-LGSGNAMVLDVLNLLEKGTNL 464
           + +G  GY      AR  R S    +L +G G+  +L  ++++++  +L
Sbjct: 380 QILGALGYTRAGPGARVERISRDLRVLIIGGGSEEILSEMSVMQERKDL 428


>gi|85372839|ref|YP_456901.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84785922|gb|ABC62104.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 380

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLSSPM-SDAFIMLAQ 248
           M    V   + +TE   G+D+  I +    I DG +  ++G K ++++   +D  I++A+
Sbjct: 117 MVSGDVITAIAMTEPGAGSDLQGIRTTA--IEDGNHLVINGSKTYITNGQNADVVIVVAK 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            +   G      +L D    G    R  +KIG  S  T EL F++               
Sbjct: 175 TDPSQGAKGTSLVLVDADTPGFERGRNLDKIGQHSADTSELFFNDCRVPKTNILGQEGRG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F  L+ +L     P E + I      A+ + +  + +  EA+ + + R   G  + +   
Sbjct: 235 FIHLMEEL-----PQERLGI------AVGAQAAAQRAFDEAVKFTKDRKAFGQTVFEFQN 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +AD+  ++    A         D A  R          A   K W   +    +  
Sbjct: 284 TKFTLADLKAELQVGWA-------HLDWAIKRHLAGELTTEEASAAKLWHTDLQWKAVDT 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +++  GG+GY+ E +IAR +R++    I  G+   M
Sbjct: 337 SLQLHGGAGYMNEYTIARLWRDARVTRIFGGTNEIM 372


>gi|85710019|ref|ZP_01041084.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688729|gb|EAQ28733.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 401

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 35/273 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------- 250
            GLTE   G+D AA+ +      DG  + L+G K +++ +P +D  +++A+ E       
Sbjct: 133 FGLTEPGSGSDSAAMATTATPDPDGNGWVLNGTKRYITNAPHADVALIMARTEKEALPKN 192

Query: 251 GRVGCFLVPR---LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             V  FLVP     +  GSP+         K+G  ++   ++   +    + GD  +   
Sbjct: 193 AHVSAFLVPMDTPGISTGSPD--------KKMGQSASHISDIMLDDVK--VPGDALLGGE 242

Query: 308 PVEDMKILIY-LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  +  +  LD+  +SV        R +L  A+ YA  R   G  +    +++  +AD
Sbjct: 243 TGKGFRFAMQSLDNGRISVGAAATGYARRALDSAVRYANERKAFGEPIARFQLIQAMLAD 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             ++I AA A+         +  +R++      + A   K +  +M   V+   ++  GG
Sbjct: 303 SEIEIYAAEAM-------MADVTARADRGENILVKAAAFKVFASEMCGRVVDRVVQVYGG 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +GY+ E    R YR++    I  G+   + L +
Sbjct: 356 AGYLAEYDAERFYRDARIYRIYEGTTQILQLQI 388


>gi|311103807|ref|YP_003976660.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758496|gb|ADP13945.1| acyl-CoA dehydrogenase FadE25 1 [Achromobacter xylosoxidans A8]
          Length = 389

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 13/265 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+  +  K+    Y L+G K W  +  ++D + + A+     G   +
Sbjct: 133 FALSEPDAGSDVAAMACEA-KLDGDHYVLNGAKTWISNGGIADFYCVFARTGEAPGARGI 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIY 317
              + D    G         I     AT+  +         LGD       +  M + I+
Sbjct: 192 SAFVVDADTPGFEVSERIELIAPHPLATITFDNCRIPVSHRLGDAGQGF-KLAMMTLDIF 250

Query: 318 LDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             S   +  G  R +L E +  ++ R + G  L D  + + A+ D+A  I A+  L++R 
Sbjct: 251 RASVAAAALGFARRALDEGLARSKSRRMFGQTLSDLQLTQAALGDMATAIDASALLTYRA 310

Query: 377 ANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A   D  K R+  EAA A++ A        + A  VI  A++  GG+G +    + + YR
Sbjct: 311 AWMRDVLKQRTTREAAMAKMTA-------TESAQTVIDRALQMFGGAGVVSGMPVEKLYR 363

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           E  A  I  G+     L +   L K
Sbjct: 364 EIRALRIYEGATEVQKLIIARELLK 388


>gi|296395345|ref|YP_003660229.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296182492|gb|ADG99398.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 386

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 19/254 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           GL+E+  G+D A++ ++ +   D  + L G K W  +   S  F ++A  +   G   + 
Sbjct: 130 GLSEREAGSDAASMRTRARAAGDD-WVLDGSKCWISNGSESTWFTVMAVTDPDKGAHGIS 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318
             +      G      + K+G + + TVEL F +    + GD  +   P    K  L  L
Sbjct: 189 AFIVHRDDEGFSVGGKEKKMGIKGSPTVELLFDHC--KIPGDRVIGE-PGSGFKTALQSL 245

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D    ++    V +A+     A+ YA+ R   G    +   +   +AD+A+ I AA  + 
Sbjct: 246 DHTRPTIGAQAVGIAQGALDIAVAYAKERKQFGRATTEFQGVSFMLADMAMKIQAARLMV 305

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  A        R+E  AA +  ++   K +   +A  V   A++ +GG+GY  +  + R
Sbjct: 306 YASAE-------RAERGAAGSTALSSAAKCFASDVAMEVTTNAVQVLGGAGYTRDFPVER 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 MMRDAKITQIYEGT 372


>gi|282936142|gb|ADB04328.1| putative acyl-CoA dehydrogenase [bacterium enrichment culture clone
           N47]
 gi|308274024|emb|CBX30623.1| Probable acyl-CoA dehydrogenase yngJ [uncultured Desulfobacterium
           sp.]
          Length = 381

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
             +TE    TD+A I ++  K  D  Y L+G K W   S + D  I  A+ +  +    L
Sbjct: 123 FAVTEPNAATDVAGIATKAIKDGDH-YILNGSKMWITHSSVFDVGICFAKTDPSQRHKGL 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              ++E G P G+     KNK+G RS+ T ++ F +       L+G+        E    
Sbjct: 182 SAFIIEKGMP-GMTGMAEKNKLGVRSSDTGQIVFEDVRVPKENLIGEEGQGFKIAESALT 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               + A  S+   + ++  A+ YA  R   G  +    + K+ IAD+  +I A+  L +
Sbjct: 241 YGRANIAGRSLGIGQAAVDAALKYANEREQFGQKIGFFQMNKQIIADMVAEIEASRLLVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D+ +  S E+        I K++  + A   +  A +  G   Y  E  +AR Y
Sbjct: 301 RAAWLQDQKRPSSNEST-------IAKFYASEAAVRAVIGAAKIHGAYTYSSEYPVARLY 353

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+    +   G+ N   L + N
Sbjct: 354 RDVMLMTAGEGTSNIQRLIIAN 375


>gi|271968155|ref|YP_003342351.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270511330|gb|ACZ89608.1| Glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 25/259 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM          LTE  GG+D+AA      +    ++ L+G K W  ++  +D  ++ A+
Sbjct: 114 PMAAMEKIGAFALTEPEGGSDVAAGLRTTARREGDVWVLNGAKRWIGNATFADLVVVWAK 173

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            E  G+V  F+V    E G+P G    +++NKI  R+    ++  +N        L  + 
Sbjct: 174 DEADGQVKGFVV----EKGTP-GFSATKIENKIALRTVQNADITLTNCLVREENRLRDAN 228

Query: 307 GPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSG----GILIDQPVMKRAIA 360
           G  +   IL      +   +V  M  +   A+ YA+ R   G    G  + Q ++ R + 
Sbjct: 229 GFRDTAAILRQTRGGVAWQAVGCMMGAYELALEYAKDREQFGRPIAGFQLVQDLLVRMLG 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++   +     +  RLA   D    + E +A A       K +C       +    E +G
Sbjct: 289 NVTCSL----GMVVRLAQLQDAGVYKDEHSAMA-------KAFCTVRMREAVGWGREIMG 337

Query: 421 GSGYIEERSIARHYRESPA 439
           G+G + +  + R   +S A
Sbjct: 338 GNGIVLDYGMGRFVADSEA 356


>gi|83956186|ref|ZP_00964639.1| probable acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|84503311|ref|ZP_01001389.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|163747307|ref|ZP_02154661.1| Acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|83839572|gb|EAP78752.1| probable acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|84388365|gb|EAQ01315.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|161379417|gb|EDQ03832.1| Acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 32/253 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA----QVEGRVG 254
             LTE   G+D  ++ +  ++  +  + L+G K +++ +P +D F + A    + EG  G
Sbjct: 122 FALTEPDAGSDAGSLRTTARRDGND-FLLNGTKRYITNAPRADLFTVFARTNPEAEGSAG 180

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP 308
              FLV    E G+P G+   +   K+G + + T ++   N        + G   ++ G 
Sbjct: 181 VSAFLV----EAGTP-GITLGQPDRKMGQKGSHTCDVILDNVRVPAANIIGGPDRLNKGF 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
              MK+L   D   + +S + V  AE     ++ YA  R   G  + ++ +++  +AD  
Sbjct: 236 KTAMKVL---DRGRLHISAVCVGAAERLIRDSLSYAMERKQFGEPIAEKQLIQAMLADSR 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  AA  +    A   D  ++ S +AA         K +  +M   V   A++  GG+G
Sbjct: 293 AEAFAARCMIEETARRKDAGQNVSTDAA-------CCKMFASEMVGRVADRAVQIHGGAG 345

Query: 424 YIEERSIARHYRE 436
           Y+ E ++ R YR+
Sbjct: 346 YMAEYAVERFYRD 358


>gi|293608195|ref|ZP_06690498.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828768|gb|EFF87130.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 39/302 (12%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L AG L + SV +A  +    +  V   + P  F+ + D T    +Q+T+ A        
Sbjct: 158 LTAGLLSTFSVINA--ITRWGSTEVQSMYLP-CFAEDSDITATFAVQETTPAF------- 207

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
               +  A+ ++    +D  +        +   ++D F++ A   G+   F+V       
Sbjct: 208 ----NAYALKTKASLENDKFFIDGEKTLVILGDLADVFLVSADFNGKPDVFVVQ------ 257

Query: 266 SPNGLCYQRLKNK----IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
                C + +  K    +G ++  T  L F++T    LG  +       D+  L++   A
Sbjct: 258 -----CNETISIKNTPAMGLKATETATLRFNHTPALRLGATDFDYTAFVDLGNLVWCAMA 312

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +   ++   A  I YA  R   G  +  +  +   IAD+A++I A   L    A+  +
Sbjct: 313 VGTCEAVK---AYCIKYANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAE 369

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K    EA  A ++       C + +  +  + ++ +GG G+ +E  + R YR+  A +
Sbjct: 370 SGKPFHREAYLAHLL-------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATA 422

Query: 442 IL 443
           IL
Sbjct: 423 IL 424


>gi|332253001|ref|XP_003275641.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 428

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G    + NV  G          
Sbjct: 234 RGFLLEKGM-QGLSAPRIQGKFSLRASATGMIIMD---GVEAPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|256422428|ref|YP_003123081.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256037336|gb|ACU60880.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 33/260 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ +  +K  DG   L+G K W     ++D +++ A+   ++  FLV R
Sbjct: 126 LTEPEAGSDAKSVAATYEK-RDGKIILNGKKRWTTFGQLADVYLVFARNADKISAFLVDR 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
                   G+    ++  +G R++    + FSN             FGF    +++    
Sbjct: 185 -----HTAGVEVTPVQGMLGTRASMIAHVTFSNCEIPEDALLGKEGFGF----ISIVNTA 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +++ +  +    A+ S+  ++  L  ++ +A RR   G  L D  ++K  + D+  +  A
Sbjct: 236 LDNGRFSV----ALGSLGILKSCLQHSMEHASRRRQFGTFLKDHQLIKLKVTDMIAEAKA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L       ++ A  R E+   A I   + KY+    A     EA++ +G  G  E+ 
Sbjct: 292 AGML------CYNAAYLRKEKQTNALIQTSLAKYYAAAAANRAAKEAVQILGALGCSEQS 345

Query: 429 SIARHYRESPANSILLGSGN 448
           ++ R +R++    I+ GS  
Sbjct: 346 AVQRCFRDAKIMEIIEGSAE 365


>gi|297203508|ref|ZP_06920905.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197714483|gb|EDY58517.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 401

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  +  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAITSKAVRDGD-EYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313
           L +  P       GL      +K+G +   T EL      G  L    V  G       +
Sbjct: 194 LIEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRLPANRVLGGATGRGFYQ 250

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A  + A
Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRHTFGKPIAQHQAIQFKLAEMATKVEA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E 
Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|152985894|ref|YP_001348634.1| citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa PA7]
 gi|150961052|gb|ABR83077.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 387

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++ D  + L+G K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRVGD-RFVLNGSKMWITNGPDAHTYVIYAKTDMDKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 187 TAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDV---EVPEENVLGAVNGGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  V + +A     + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTSLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E S  R
Sbjct: 304 LYAVAAACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFSTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|330941797|gb|EGH44546.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 308

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 122/293 (41%), Gaps = 34/293 (11%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226
           H +      +R   P  KA   P   +   +G L ++E   G+D+ ++  +  K  D  Y
Sbjct: 16  HSNLCVNQINRNGSPAQKARYLPRLISGEHVGALAMSEPNAGSDVVSMKLRADKRGDH-Y 74

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K W  + P +D +++ A+ +       +   + +    G       +K+G R + 
Sbjct: 75  VLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSN 134

Query: 286 TVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLA 333
           T EL F        N  G L G + V         ++  LD   + +SG     M+  + 
Sbjct: 135 TCELFFDDVEVPEENLLGVLDGGVRV---------LMSGLDYERVVLSGGPTGIMQACMD 185

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  ++  ++AA  
Sbjct: 186 VVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGETTRKDAAGV 245

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       +  + A  +  E ++ +GG+GYI E    R  R++    I  G+
Sbjct: 246 IL-------YSAERATQMALETIQILGGNGYINEFPAGRLLRDAKLYEIGAGT 291


>gi|311113463|ref|YP_003984685.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
 gi|310944957|gb|ADP41251.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
          Length = 397

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 26/245 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR-------- 252
            TE   G+D+ A  +   +  D  Y L+G K F+ S +S DA ++LA+ +G         
Sbjct: 140 FTEPGAGSDLRACRTSAVRDGDS-YLLNGQKTFIGSGISGDAALVLARTDGSSERASEDS 198

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
              F V +        G    R  +K+G R++ T EL F N       L+G+L      +
Sbjct: 199 FSLFFVEK------SEGYTPGRQLDKMGIRASDTAELFFENVRVPAENLIGELGQGLTYI 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L  A  S    R +L   + Y + R V G  + D    +  +A+  ++   +
Sbjct: 253 KQHLPQARLAIAAASAVISRTTLNATLEYVKERKVFGSRVADFQNTRFELANALMNTELS 312

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R   +F+  +  +E+AA A++ A        + A  +    ++  GG GYI E  
Sbjct: 313 ELYVARAIAAFNAGELTAEDAAKAKVFA-------SEKACTITDRCLQLFGGYGYINEHP 365

Query: 430 IARHY 434
           +A+ +
Sbjct: 366 VAQAF 370


>gi|29831818|ref|NP_826452.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|5524296|gb|AAD44196.1|AF143210_1 acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|15823939|dbj|BAB69160.1| acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|29608935|dbj|BAC72987.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 386

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 132/318 (41%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-K 220
           + L  T     +W P++ S E             +    GLTE  GG+D  A  +  +  
Sbjct: 98  IHLFGTDAQKAEWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            S   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 145 ESTNEWVINGTKCFITNSGTDITGLVTVTAVTGRKPDGKPLISSIIVP----SGTP-GFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F++       LLG+     G  + ++IL   D   +++S +
Sbjct: 200 VAAPYSKVGWNASDTRELSFADVRVPAANLLGEQG--RGYAQFLRIL---DEGRIAISAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA  RH  G  +     ++  IAD+ +    A          + +A
Sbjct: 255 ATGLAQGCVDESVKYAGERHAFGRNIGAYQAIQFKIADMEMKAHMARV-------GWRDA 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A I K +   +A     EA +  GG G++ E  +AR +R+S    + 
Sbjct: 308 ASRLVAGEPFKKEAAIAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILE 365

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 366 IGEGTSEVQRMLIARELG 383


>gi|319762952|ref|YP_004126889.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825032|ref|YP_004388335.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117513|gb|ADV00002.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310404|gb|AEB84819.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 409

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 28/270 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           AP+ +   AI   LTE   G+D  A+ ++  +  D  Y L G K F+S SP +D  ++LA
Sbjct: 139 APVARADKAICFALTEAGAGSDAGALQTRATQDGDH-YVLHGRKRFISGSPFADCAVLLA 197

Query: 248 QV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLG 300
                   E  +  F V    +  +P        K   G      + L+ +      L+G
Sbjct: 198 STAPEGAAEREISAFFV----DLHAPGVEVVSGYKTMAGQSHTGDIVLDGARVPAAQLIG 253

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    L ++ G +   +++     A++ ++  +V+L +A  YA  R   G  +     ++
Sbjct: 254 ERGRGLALALGRITVNRLMHC--PAMLGLA--QVALRDARDYALERRQFGRSIAQFQAIQ 309

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A   AAA AL  + A + D           AR  A ++K +C + A  +   A+
Sbjct: 310 HMLADMATQWAAARALMVQTARAIDAGID-------ARAQASMSKLFCSEAAFGIADRAV 362

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG G ++ R +   +R      +L G+
Sbjct: 363 QIHGGEGIVQGRRVEFLFRMLRMYRVLTGT 392


>gi|294674690|ref|YP_003575306.1| acyl-CoA dehydrogenase [Prevotella ruminicola 23]
 gi|294472479|gb|ADE81868.1| acyl-CoA dehydrogenase [Prevotella ruminicola 23]
          Length = 575

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 24/290 (8%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
            + + LTE   G+D+  +  +      +  + L+G K F+++  SD  ++LA+ E G   
Sbjct: 170 GMSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTKD 229

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   + D    G+  + +++K+G   + T EL + N    L G  +   G ++ +  
Sbjct: 230 GRGLSMFIYDKRQGGVDVRHIEHKLGIHGSPTCELTYKNAKAELCG--STRLGLIKYVMA 287

Query: 315 LI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L+    L  A  SV   + +  E + YA+ R   G  +I+ P +   ++ +   + A  +
Sbjct: 288 LMNGARLGIAAQSVGVEQEAYNEGLAYAKERQQFGDKIINFPAVYDMLSRMKAKLDAGRS 347

Query: 372 LSFRLANSFDEAK--------------SRSEEAAYARI---MAPITKYWCCKMAPAVIAE 414
           L +  A   D  K               + E   Y R+     P+ K    + A     +
Sbjct: 348 LLYETAAYVDIYKCLEDIERDRKLTPEEKQELKKYQRLADAFTPLAKGMNSEYANQNAYD 407

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           A+   GGSG+I E    R +R++   SI  G+    V+  +  +  GT L
Sbjct: 408 AISIHGGSGFIMEYKSQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTML 457


>gi|229151284|ref|ZP_04279490.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           m1550]
 gi|228632284|gb|EEK88907.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           m1550]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|269126814|ref|YP_003300184.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|269128311|ref|YP_003301681.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311772|gb|ACY98146.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
 gi|268313269|gb|ACY99643.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 390

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 117/273 (42%), Gaps = 28/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ +        L+E   G+D A++ ++  +  D  + L+G K W  ++ +S  + ++A
Sbjct: 116 APVARGEAMFSYALSEPEAGSDAASMKTRAVRDGDA-WVLNGVKMWITNAGVSQYYTVMA 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + D    G+ +   + K+G + + T ++        +L D+ V   
Sbjct: 175 VTDPGKGARGISAFVVDKDDEGVSFGPPERKLGIKGSPTRQV--------ILEDVRV--- 223

Query: 308 PVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
           P E M           L  LD   ++++   + +A+     A+ Y + R   G  + D  
Sbjct: 224 PAERMIGAEGTGFKTALATLDHTRITIAAQALGIAQGALDYALGYVKERRQFGRPVADFQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A+ I AA  L++  A    E   R E       ++   K     +A  V  
Sbjct: 284 GVQFMLADMAMQIEAARQLTYHAAVK-SERVMRGESVPDLTFVSSACKCLASDVAMKVTT 342

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 343 DAVQLLGGYGYTRDFPVERMMRDAKITQIYEGT 375


>gi|308810709|ref|XP_003082663.1| probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
 gi|116061132|emb|CAL56520.1| probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
          Length = 434

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 23/277 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           AP  +    I L +TE   G+D+A I  + +    G  Y ++G K W  +   +D F + 
Sbjct: 149 APCLRGEGIICLAITEPYAGSDVANIRCEAKLDPSGKFYSVTGEKKWITNGIWADYFTVA 208

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
            +  G     +   ++E   P   C  R  + +G  ++ T  + F +       L+G+ N
Sbjct: 209 VRTGGPGMGGISLLVIERSMPGVDC--RRMDCMGVWASGTTFITFEDVKVPVENLIGNEN 266

Query: 304 VSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                 E  K +++          I +    RV   E+  YA RR   G  LI+ PV++ 
Sbjct: 267 ------EGFKYIMHNFNHERWGFVIQANRFARVCYEESFKYAHRRRTFGKPLIEHPVIRH 320

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++   + A   L   +    +         A A I A + K    K+      EA +
Sbjct: 321 KLAEMIRQVEATHCLLETITYQMNTMTKEEAAKALAGITA-LAKVQSTKVFEFCAREAAQ 379

Query: 418 CIGGSGYI---EERSIARHYRESPANSILLGSGNAMV 451
             GG+ Y+   +   + R YR+  A +I  GS   M+
Sbjct: 380 VFGGASYVRGGQGEKVERLYRDVRAYAIPGGSEEIML 416


>gi|255319786|ref|ZP_05360991.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262380320|ref|ZP_06073474.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303105|gb|EET82317.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262297766|gb|EEY85681.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 390

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 130/330 (39%), Gaps = 44/330 (13%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT-SVA 197
           RLY M  +E       S T  S+ + +    ++       F  E       P   T  V 
Sbjct: 79  RLYSMILIEEQAYAGDSATGFSLHSDIVANYINN------FGNEKQKQYWLPQMATGEVV 132

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV----EG 251
             + +TE   G+D+ A+ +    I DG  Y ++G K F+++  + D  I++ +     +G
Sbjct: 133 TAIAMTEPGTGSDLQAVRTSA--ILDGDEYVINGSKIFITNGYLCDMAIVVCKTGNSDKG 190

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
                L+  ++E G P G    +  NKIG +   T EL F N       LLG        
Sbjct: 191 SANLSLI--MVEAGRP-GFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG-------- 239

Query: 309 VEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +E M  ++ +          AI+  +G   + A  + Y + R      +      +  +A
Sbjct: 240 MEGMGFMMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKERKAFSKPIATFQNTRFKLA 299

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  +I        R      EA+   + AA A       KY    M   V+ E ++  G
Sbjct: 300 ELRTEIDIGRTYLDRCMQLQLEAQLGIDAAAAA-------KYKLSDMYSKVVDECLQLHG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  IAR Y +  AN I  G+   M
Sbjct: 353 GYGYMLEYPIARAYIDHRANRIYAGTNEIM 382


>gi|194383082|dbj|BAG59097.1| unnamed protein product [Homo sapiens]
          Length = 394

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 133 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   R++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 190 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN----VLPGASSLGGPFG 244

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  S     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 245 CLNNARYGIAWGVLGAS--EFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLG 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 303 LHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 355

Query: 430 IARH 433
           + RH
Sbjct: 356 VIRH 359


>gi|163790014|ref|ZP_02184449.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
 gi|159874714|gb|EDP68783.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
          Length = 406

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 27/250 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCF 256
             LTE   G+DIA   +   +     + ++G K W   +  +D   + A  + +G+V  F
Sbjct: 148 FALTEPEHGSDIAGGLATTARKEGDTWIINGEKRWIGGAGSADEMAVFARDEADGKVKAF 207

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDM 312
           +VP     G   G+  Q+++ KI  R      + F++     +G+     NV++   +D+
Sbjct: 208 MVP-----GKAEGVHVQKIEGKISLRMTQNGHITFTDV---KVGEDRRLQNVNS--FKDV 257

Query: 313 KILIYLDSAIMS--VSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             ++ +  A +S   +G+     EA + Y ++R   G  L    +++  ++ +  ++ A 
Sbjct: 258 AGILRITRADISHLATGLTAGAFEAALRYVKQREQFGKNLGSFQLVQEKLSIMQANVTAN 317

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            + S RLA          EE  Y  + + + K          +A A E +GG+G   E  
Sbjct: 318 LSFSVRLAQM-------QEEGNYREVNSSMAKMHNALRMRETVALAREVVGGNGITLETD 370

Query: 430 IARHYRESPA 439
           +AR + ++ A
Sbjct: 371 VARFFADAEA 380


>gi|299068474|emb|CBJ39697.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum CMR15]
          Length = 401

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 22/255 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    +   D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 132 FALSEPEAGSDVAAMACAARADGDS-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
              ++E G+P     +R+        +    L F++    +  D  V     E  K+ + 
Sbjct: 191 SAFIVEAGTPGFEIAERIDVIA---PHPLARLRFTDCR--IPADQRVGAAG-EGFKVAMR 244

Query: 317 YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD    SV+       R +L EA+  A  R +  G+L D  + +  +A +A  I +A  
Sbjct: 245 TLDVFRTSVAAAALGFARRALDEALARATTRKMFNGVLADFQLTQAKLAQMATAIDSAAL 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R A   D+ +S + EAA A++ A        + A  VI  A++  GG G + E+ + 
Sbjct: 305 LTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDAAVQMWGGLGVVSEQPVE 357

Query: 432 RHYRESPANSILLGS 446
           R YRE  A  I  G+
Sbjct: 358 RLYREIRALRIYEGA 372


>gi|302557332|ref|ZP_07309674.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302474950|gb|EFL38043.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 401

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 73/294 (24%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D++AITS+   + DG  Y L+G K +L++  + + +            LV    ++G 
Sbjct: 135 GSDVSAITSKA--VKDGEEYVLNGQKMWLTNGGTSSLV----------AVLVRS--DEGH 180

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------------- 313
           P+G           ++S  T  +E    FG +   L V  G ++ M              
Sbjct: 181 PDGTAP--------HKSMTTFLVEKEPGFGEVRPGLTVP-GKIDKMGYKGVDTTELIMDG 231

Query: 314 ILIYLDSAIMSVSGM------------RVSLAE------------AIHYARRRHVSGGIL 349
           + I  D  +  V+G             RV++A              + YA++RH  G  +
Sbjct: 232 LRIPADRVLGGVTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVQYAQQRHTFGKPI 291

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +A++A  + AA A+    A   D  +    EA  A       KY   +   
Sbjct: 292 AQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCK 344

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            V+ +A    GG G+ +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 345 EVVEDAFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|254774390|ref|ZP_05215906.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 405

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           PM    V     LTE   G++ A + ++   ++DG  + +SG K F++ +P+++ F++ A
Sbjct: 126 PMAAGDVVASFALTEPGAGSNPAGLRTK--AVADGDNWVISGQKRFITNAPVANLFVVFA 183

Query: 248 QV-----EG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +      +G  +  FLVP         G+       K+G     T ++ F +    + GD
Sbjct: 184 RTRPADDQGPGIAVFLVP-----ADAAGVQVGAKDAKMGQEGAWTADVSFDDVR--VGGD 236

Query: 302 LNVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             +  G  ED+     + S        A ++V   + +L E++ YA      G  + +  
Sbjct: 237 ALI--GGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSYASTATQGGTPIGNFQ 294

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD   ++ A  AL    A  +   + R       R+     K +C +MA  V  
Sbjct: 295 LVQAMLADQQTEVLAGRALVREAARLWVTGEDR-------RVAPSAAKLYCTEMAGRVAD 347

Query: 414 EAMECIGGSGYIEERSIARHYRE 436
            A++  GGSGY+    + R YR+
Sbjct: 348 LAVQVHGGSGYMRGVPVERIYRD 370


>gi|327274792|ref|XP_003222160.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Anolis
           carolinensis]
          Length = 433

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 44/283 (15%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP     V   LG++E   G+D+A+I ++  +  D      G  W  +   +D   +LA 
Sbjct: 159 APTIAGDVVACLGVSEPGAGSDVASIKTKAVRKGDDYNINGGKMWITNGCQADWMCLLAN 218

Query: 249 VEGRVGCFLVPRLLEDGSP-------------NGLCYQRLKNKIGNRSNATVELEFSNT- 294
                          DG P             +G+   +  +K+G RS+ T ++ F +  
Sbjct: 219 T-------------SDGPPHKNKSLLCLPMKTSGVHIAKKIDKMGMRSSDTAQIFFEDVR 265

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGI 348
               +L+G+  +  G +  M  L + +  +  V+ + V L     E I+Y R+R +    
Sbjct: 266 VPSKYLIGEEGM--GFIYQM--LQFQEERMWGVANVLVPLENIIQETINYTRQRKIFNQP 321

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +I + ++   +A++A ++    +L +R    +      ++ A+ A++ A         +A
Sbjct: 322 IIQKQIVHFRLAELATEVELLRSLLYRAVALYIHGNDVTKFASMAKLKAGY-------LA 374

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             V    ++  GG G+  E  ++R YR+    SI  G+   M+
Sbjct: 375 REVPDSCLQFWGGMGFTNEVLVSRLYRDLRLLSIGAGADEVML 417


>gi|302548205|ref|ZP_07300547.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302465823|gb|EFL28916.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 388

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 24/259 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVG 254
           + LTE  GG+D+ A+ +  ++  D         W  +S  S    +L + +        G
Sbjct: 124 MALTEPGGGSDLQAMRTVARRDGDDFVVNGTKTWITNSRRSQLIALLCKTDPDASPAHKG 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVED 311
             ++  L+E G   GL   R   K+G +   + EL F +       +LG      G  + 
Sbjct: 184 ISIL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFEDYRAPADAVLGGAE-GKGFAQM 238

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK L    L  A  ++   R +L +A+ YA+ R   G  +     +   +AD+A  + AA
Sbjct: 239 MKGLETGRLQVAARALGVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTAA 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+   A   D  +    EA  A++ A  T       A  +   A+   GG GY  E  
Sbjct: 299 RQLTLYAAREADAGRRVDMEAGMAKLFASET-------AMQIALNAVRIHGGYGYSTEFD 351

Query: 430 IARHYRESPANSILLGSGN 448
           + R++R++P   +++G G 
Sbjct: 352 VERYFRDAPL--MIVGEGT 368


>gi|255535709|ref|YP_003096080.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341905|gb|ACU08018.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 379

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 42/276 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P+    V     L+E   G+D  A + Q   I  G  Y L+G K W  +   +  +I++A
Sbjct: 113 PLASGEVIGAFALSEPEAGSD--ATSQQTTAIDKGDHYLLNGTKNWITNGGNATYYIVIA 170

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------- 294
           Q +       +  F+V +  E     G      ++K+G R + T  L F++         
Sbjct: 171 QTDPEKKHKGINAFIVEKGWE-----GFEIGPKEDKLGIRGSDTHSLLFTDVKVPKENRI 225

Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               FGF      +  G V        + S  + ++     LA  + YA+ R      +I
Sbjct: 226 GDDGFGFAFAMGVLGGGRVG-------IASQALGIASGAYELA--LKYAKTRKAFKTEII 276

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   +   +AD+A +I AA  L ++ A   D  K  +E  A A++       +  ++A  
Sbjct: 277 NHQAIAFKLADMATNIMAARMLCYKAAVDKDAGKDIAEIGAMAKL-------YASQVAMD 329

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              EA++  GG GY++E  + R  R++    I  G+
Sbjct: 330 TTIEAVQIHGGYGYVKEYHVERMMRDAKITQIYEGT 365


>gi|194865856|ref|XP_001971637.1| GG15072 [Drosophila erecta]
 gi|190653420|gb|EDV50663.1| GG15072 [Drosophila erecta]
          Length = 420

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 40/267 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           GL ++E   G+D+ ++  + ++  D  Y L+G K W  +   +D  I+ A+  G      
Sbjct: 158 GLAMSEPGAGSDVVSMKLRAERKGD-YYVLNGSKFWITNGSDADTLIVYAKTGGSGVPDK 216

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV- 309
             +  F+V    E     G    +  +K+G R ++T EL F         DL V    + 
Sbjct: 217 HGITAFIVETAWE-----GFSVAQKLDKLGMRGSSTCELVFQ--------DLKVPAKNIL 263

Query: 310 --EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             E+  + + +          A   V  M+ +   A  YA +R     ++ +  +++  +
Sbjct: 264 GQENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFDYAHQRKQMNKLIGEFQLLQGKM 323

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   ++A  +  + +A S D A +RS +     I+      +  + A  V  +A++ +
Sbjct: 324 ADMYTTLSACRSYLYTVARSCD-AGNRSPKDCAGVIL------YTAEKATQVALDAIQIL 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GYI E    R  R++    I  G+
Sbjct: 377 GGNGYINENPTGRILRDAKLYEIGAGT 403


>gi|183983822|ref|YP_001852113.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium marinum M]
 gi|183177148|gb|ACC42258.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium marinum M]
          Length = 388

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 47/262 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
           G GLTE   G+D A  T    ++  G + ++G K F+++  +D  + + +  V G     
Sbjct: 127 GFGLTEPGAGSD-AGSTRTTARLDGGEWVVNGSKQFITNSGTDITSLVTITAVTGSIADG 185

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +   +VP     G+P G   + + NK+G  ++ T  L F         D  V   P 
Sbjct: 186 KKEISTIIVP----SGTP-GFIVEPVYNKVGWNASDTHPLSFD--------DARV---PE 229

Query: 310 EDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           E++           L  LD   ++++ +   +A     E++ YA+ R   G     QP+ 
Sbjct: 230 ENLLGIRGKGYANFLSILDEGRIAIAALATGVAQGCVDESVKYAKERQSFG-----QPI- 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             +   I+  IA   A +     ++ EA ++       +  A I K    + A     +A
Sbjct: 284 -GSYQAISFKIARMEARAHVARTAYYEAAAKMLAGKPFKKEAAIAKMISSEAAMDNARDA 342

Query: 416 MECIGGSGYIEERSIARHYRES 437
            +  GG G++ E  +ARHYR+S
Sbjct: 343 TQVHGGYGFMNEYPVARHYRDS 364


>gi|111019289|ref|YP_702261.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818819|gb|ABG94103.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV---- 249
           +   + +TE   G+D+A I +  +   DG  Y L+G K F++   ++D  +++ +     
Sbjct: 120 IMFAIAMTEPGTGSDLANIATSAKLSDDGSHYVLNGAKTFITGGALADRILVVCRTAPST 179

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
             + R G  +   L+ D +  G    R   KIG +++ T EL F++        LGD   
Sbjct: 180 PEDRRAGLTI---LVVDTTSEGFAVGRKIEKIGLKASDTAELSFTDVTVPVADRLGDEGA 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +        L  A+   +    +L  AI Y + R V G  +      K  +A+ A 
Sbjct: 237 GFSYLTHNLAQERLSIALGGSATAAAALQHAIAYVKERKVFGKPVAAFQNTKFVLAECAT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A   ++ R     D  +    +AA A++       +C + A  VI + ++  GG GY
Sbjct: 297 EVEAIQLMADRALELHDAGELTVPDAAKAKL-------FCTEAAGRVIDKCLQLHGGYGY 349

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           I E  IAR Y ++  + I  G+   M
Sbjct: 350 ILEYPIARLYADTRVSRIYGGTSEVM 375


>gi|72161350|ref|YP_289007.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915082|gb|AAZ54984.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 384

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 52/313 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     W P++ S E              A+G  GLTE  GG+D  A T    ++  G 
Sbjct: 103 TPEQQATWLPRLCSGE--------------ALGAFGLTEPEGGSDAGA-TRTTARLDAGE 147

Query: 226 YCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLK 276
           + ++G K F+++  +D  A + +  V G+       +   +VP     G+P     QR  
Sbjct: 148 WVINGTKSFITNSGTDITALVTVTAVTGQRPDGRPEISAIIVP----AGTPGFTIGQRY- 202

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G  ++ T EL F++       LLG+           + L  LD   ++++ + V LA
Sbjct: 203 SKVGWCASDTNELVFTDCRVPEANLLGERGRGY-----AQFLSILDEGRIAIAALAVGLA 257

Query: 334 -----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                E + Y  +R   G  +     ++  IAD+A  +  A    +  A      +   +
Sbjct: 258 QGCVDECLRYVGQRVAFGREIGRYQAIQFKIADMAARVHTARLAYYDAAARLLAGQPFKK 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA A+++A          A     +A +  GG G++ E  + R YR+  A  + +G G 
Sbjct: 318 EAAIAKLVA-------SHAAMDNARDATQIFGGYGFMNEYPVGRFYRD--AKILEIGEGT 368

Query: 449 AMVLDVLNLLEKG 461
           + +  ++   E G
Sbjct: 369 SEIQRMVIARELG 381


>gi|254786386|ref|YP_003073815.1| acyl-CoA dehydrogenase [Teredinibacter turnerae T7901]
 gi|237684930|gb|ACR12194.1| acyl-CoA dehydrogenase [Teredinibacter turnerae T7901]
          Length = 1286

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 131/324 (40%), Gaps = 31/324 (9%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--F 256
            L +TE   G++  AI++  +    G + ++G K W  +   S       QV+   G    
Sbjct: 728  LAITEPGAGSNPHAISATARPAPQGGWLITGEKCWIGNGSWSGVINTFVQVKDEQGNPKG 787

Query: 257  LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            L    +E G  +G+        +G R      + F +   T   +LG +       +D  
Sbjct: 788  LTAFAIEQGR-SGMWMGEEAPTMGMRGMVQNRIHFKDVHVTESDMLGRVGQGMEIAQDAM 846

Query: 314  ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   L  A MS+ G++ +      YA+RR V+ G L +  V  + ++++   IAA  A+ 
Sbjct: 847  MHGRLVIAAMSLGGLKRAAQLMTRYAQRRDVASGKLFESSVSIQRLSEMHATIAAIQAMV 906

Query: 374  FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAV----IAEAMECIGGSGYIEER 428
              L    D+            +  P   Y  CK  AP      + + M+ +GG GY E  
Sbjct: 907  RSLGELIDQG-----------VEIPSEIYAACKTSAPEFLWKGVDQLMQMLGGRGYTENN 955

Query: 429  SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            ++ +  R+     I  G   A  L+V  +  +  N  EQ+ S ++  L SS      +  
Sbjct: 956  AVPQLMRDLRLFRIFEGPTEA--LNVF-IGARVINGGEQILSFIKNTLQSS-----DVAT 1007

Query: 489  DSISLCKEDKGLARFLTEKIALAS 512
            D  S+  E   LA    E+I L S
Sbjct: 1008 DVASMASEMLHLATASGERIGLNS 1031


>gi|255956277|ref|XP_002568891.1| Pc21g19000 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590602|emb|CAP96797.1| Pc21g19000 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 438

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 8/266 (3%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LG+TE   G+D+A I +  Q+  DG  Y ++G K ++++ +   +   A   G  G   +
Sbjct: 158 LGITEPDAGSDVANIQTTAQR--DGNHYVVNGSKKWITNGIWADYCTAAVRTGGPGRSGI 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             L+   +  G+  +R+ N   N S +T  +EF +       L+G  N     +      
Sbjct: 216 SLLVIPLATAGVTRRRMHNSGVNASGSTF-IEFEDVRVPVENLVGQENKGFPLIMSNFNP 274

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A  S+   RV   +A +YA +R   G  LI++  ++  I    L I  A A   +
Sbjct: 275 ERLALACASLRLARVCAEDAYNYAIKRETFGSALIEKQAIQSKIFKFGLMIEPAYAFMEQ 334

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           L N  +  K R  +      M  + K    +     + EA + +GG+GY +    AR  +
Sbjct: 335 LVNILELTKDRPSDDVNIGGMTALLKVMSTRALEKSVREAQQIMGGAGYNKAGKGARIEQ 394

Query: 436 ES-PANSILLGSGNAMVLDVLNLLEK 460
            S  A   ++G G+  ++  L L E+
Sbjct: 395 ISRDARVHVVGGGSEEIMAGLALREE 420


>gi|149924169|ref|ZP_01912546.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149814970|gb|EDM74530.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/271 (19%), Positives = 113/271 (41%), Gaps = 17/271 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           I    +E   G+D+A + ++  K   G + L+G K W  ++  +  +   A ++  +   
Sbjct: 121 ISYACSEPDAGSDVAGMKAKLTKKEGGGWILNGQKRWITNASHAGIYTGFATIDPALKHK 180

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + D +  G+   + + K+G R++ T ++ F +     + D  +   P +   I +
Sbjct: 181 GITAFVVDRNAKGVSVGKKEKKLGQRASDTADVLFEDV---EIPDEQILGEPGKGFYIAM 237

Query: 317 YLDSAIMSVSG------MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +      + G      +R  L E+  YA  R   G  + +   ++  +AD+A+   A+ 
Sbjct: 238 EVFDKSRPMIGACAAGLIRRCLDESCKYALERKTFGVPIGNHQAIQMILADMAISYEASR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  + A   D  K R+       + + + K +    A     +A++  GG GY  E  +
Sbjct: 298 LMYMKAAWEVDAGKKRT-------LTSSLAKCFSADAAVKAATDAVQVFGGYGYTREYPV 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            + YR++    I  G+     + +   L +G
Sbjct: 351 EKLYRDAKLLQIYEGTSQVQRMVIARGLLRG 381


>gi|145543779|ref|XP_001457575.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425392|emb|CAK90178.1| unnamed protein product [Paramecium tetraurelia]
          Length = 414

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 41/250 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ S  +K  D  Y L+G K W  +SP++D F++ A+ E G +  F+
Sbjct: 155 FGLTEPDHGSDPGSMKSHAKK-KDNYYILNGTKSWITNSPIADVFVVWAKDEKGDIRGFV 213

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           + + ++     GL   +++ K+  RS+ T ++        ++ ++ V   P E+M   + 
Sbjct: 214 LEKGMK-----GLSTPKIEGKLSLRSSITGQI--------IMDNVKV---PQENMFTTVK 257

Query: 318 --------LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIA 363
                   L++A   ++   +  AE   H+ R     R+     +   Q + K+  A++ 
Sbjct: 258 GLKGPFSCLNNARFGIAWGTLGAAEFCFHHTRQYALDRKQFDANLASFQLIQKK-FAEMT 316

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            DIA A     +++   +  +  +E+ +       + K   C +A  +  E  + +GG+G
Sbjct: 317 TDIALAQQAVLQVSRLKENDQLATEQVS-------LIKRNSCGIALKIARECRDILGGNG 369

Query: 424 YIEERSIARH 433
             +E  + RH
Sbjct: 370 ISDEYQVIRH 379


>gi|163940817|ref|YP_001645701.1| acyl-CoA dehydrogenase type 2 [Bacillus weihenstephanensis KBAB4]
 gi|163863014|gb|ABY44073.1| Acyl-CoA dehydrogenase type 2 domain [Bacillus weihenstephanensis
           KBAB4]
          Length = 382

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 111/237 (46%), Gaps = 25/237 (10%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G+K     + ++G K F + +P+ D FI+ A +EG+  +G F++P+  
Sbjct: 136 RGGKPETLAVKKGEK-----WIINGRKTFTTMAPVLDYFIISASIEGQEDIGEFVIPK-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDS 320
              +  G+  +   + I  R  A+ +L   N         D+  S    + +  L+++ +
Sbjct: 189 ---NTQGVTIEETWDSIAMRGTASHDLVLQNVEIPDRFFTDIKGSKVKAKGIGWLLHIPA 245

Query: 321 AIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             + +  S    ++  A+ Y +   ++  I +  P ++R + ++ L++  A    +++A 
Sbjct: 246 CYLGIAQSARNYAVQFAVSY-KPNSLNHSISL-LPNVRRLVGELELELMQARVFLYQIAK 303

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +DEA+ + S +A  A +     KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 304 KYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|48478096|ref|YP_023802.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48430744|gb|AAT43609.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 357

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 19/232 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF 256
           +GLG+TE  GG+D+A + +   K S   Y ++G K F+++  ++D  ++LA+        
Sbjct: 104 LGLGVTEPTGGSDVAGLKTTAVK-SGNKYIINGSKIFITNGSIADYILVLARTSNESKRH 162

Query: 257 L-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-- 313
           L +   L D    G    +L  K+G R+  T EL+F++    L  D ++  G  E M   
Sbjct: 163 LGLSVFLVDTKSKGFSASKLHGKLGVRATDTAELKFND----LEVDESMLVGE-EGMGFY 217

Query: 314 -ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            I+I+ D + + V+   + +AE    +  ++V    + D+  M   IA +   + AA  L
Sbjct: 218 YIMIFFDISRVYVAAQALGIAEGALDSMMKYVKENNIRDENTM-FDIARVYTRVQAARLL 276

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++    +   + ++ E+ + A+  A     +  +       +A+E  G SGY
Sbjct: 277 TYNATMNLVNSVTKPEDTSAAKAYAGEAAVYAAE-------KALEITGLSGY 321


>gi|15895968|ref|NP_349317.1| butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|1703066|sp|P52042|ACDS_CLOAB RecName: Full=Acyl-CoA dehydrogenase, short-chain specific;
           AltName: Full=Butyryl-CoA dehydrogenase; AltName:
           Full=SCAD
 gi|15025744|gb|AAK80657.1|AE007768_11 Butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|1055219|gb|AAA95968.1| putative butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC
           824]
 gi|325510120|gb|ADZ21756.1| Butyryl-CoA dehydrogenase [Clostridium acetobutylicum EA 2018]
          Length = 379

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P+ K       GLTE   GTD  A   Q   + +G  Y ++G K F+++  ++D F++ A
Sbjct: 113 PLAKGEKIGAYGLTEPNAGTDSGA--QQTVAVLEGDHYVINGSKIFITNGGVADTFVIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G    +++ K+G R+++T EL F         D+ V   
Sbjct: 171 MTDRTKGTKGISAFIIEKGFKGFSIGKVEQKLGIRASSTTELVFE--------DMIV--- 219

Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353
           PVE+M  K       A+ ++ G R+ +A            EA  Y + R   G  L    
Sbjct: 220 PVENMIGKEGKGFPIAMKTLDGGRIGIAAQALGIAEGAFNEARAYMKERKQFGRSLDKFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+ + I +A  L ++ A         + +AA A++ A         +A  V  
Sbjct: 280 GLAWMMADMDVAIESARYLVYKAAYLKQAGLPYTVDAARAKLHA-------ANVAMDVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY ++  + R  R++    I  G+
Sbjct: 333 KAVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365


>gi|332264032|ref|XP_003281052.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Nomascus
           leucogenys]
          Length = 415

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F            S   GFL+    +
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVKGL 273

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     +   R   G  L     ++  +AD+A 
Sbjct: 274 NGGRI---------NIASCSLGAAHASVVLTRDHLNVRKQFGEPLASNQYLQFKLADMAT 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 325 RLVAAR-LMIR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 378

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 379 LKDYAVQQYVRDSRVHQILEGSNEVM 404


>gi|325096143|gb|EGC49453.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 515

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +  +K  DG  Y ++G  KW  +   +D F+   + +      L
Sbjct: 248 LAVTEAFAGSDVAGIRTTAEKTPDGKHYIINGTKKWITNGMWADYFVTACRTDKGYSVIL 307

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +PR       N +  +R+K      + AT  ++F N       LLG+ +   G +  M  
Sbjct: 308 IPR------DNNVETKRIKTSYSTAA-ATAFIQFDNVKVPVENLLGEEH--KGFIVIMSN 358

Query: 315 LIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA- 371
             +   A+        R  + E + +A +R V G  LI+QPV+++ +A +   + A+ + 
Sbjct: 359 FNHERWAMTCGVTRWCRTVVEECLKWANQRIVFGKPLINQPVIRQKLAKMISLVEASQSW 418

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE 426
              +++++ N     +SR        +  PI   K +  + A  +  +A+   GG G  +
Sbjct: 419 LETITYQMCNMSYRERSR-------HLGGPIGLLKSYSTRCAHEIADDAVNIFGGRGITQ 471

Query: 427 E---RSIARHYRESPANSILLGS 446
               R + + +R    ++IL G+
Sbjct: 472 TGMGRVVEQFHRTYKFDAILGGA 494


>gi|290959882|ref|YP_003491064.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260649408|emb|CBG72523.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 385

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A + ++  +  D  Y L+G K W  ++ +SD + ++A  +       +  
Sbjct: 131 LSEPDAGSDAAGMKTRAVRDGD-FYVLNGVKRWITNAGVSDYYTVMAVTDPDKRSKGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            + + S  G+ +   + K+G + + T E+   N       ++G+    TG    MK L  
Sbjct: 190 FVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEG--TGFATAMKTL-- 245

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            D   ++++   + +A+     A  Y + R   G  + D   ++  +AD+A+ I AA AL
Sbjct: 246 -DHTRITIAAQALGVAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKIEAARAL 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +++ A     AKS   +           K +   +A  V  +A++ +GG GY  +  + R
Sbjct: 305 TYQAA-----AKSERGDKDLT-FQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVER 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 MMRDAKITQIYEGT 372


>gi|167768406|ref|ZP_02440459.1| hypothetical protein CLOSS21_02963 [Clostridium sp. SS2/1]
 gi|317499239|ref|ZP_07957513.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167709930|gb|EDS20509.1| hypothetical protein CLOSS21_02963 [Clostridium sp. SS2/1]
 gi|291560376|emb|CBL39176.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SSC/2]
 gi|316893490|gb|EFV15698.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 378

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 28/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D +A T+   K  D  + L+G K F+++  ++  + + A  +   G   +  
Sbjct: 123 LTEPGAGSDASAGTTTAVKDGDE-WVLNGRKCFITNGGIASFYCITAMTDKTKGVKGISM 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMK----I 314
            L D    GL     +NK+G R+        SNT   +L D  +    +  E+ +     
Sbjct: 182 FLVDAGTPGLSTGNEENKMGIRT--------SNTCDVVLEDCRIPAANLVGEEGRGFSIA 233

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD A   +  +   +A     E I YA+ R   G  +I    M+  +AD+ +    A
Sbjct: 234 MKTLDQARAWMGCVATGIAQRGINEGIAYAKERVQFGKPVIKNQAMQFKVADMEIKTETA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +        D     S+EAA       I K +   +A  V +EA++  GG GY  E  
Sbjct: 294 RQMVAHALTKMDMGLPHSKEAA-------IAKCYASDIAMEVASEAIQMFGGYGYSREYP 346

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
           + +  R++    I  GS     + V N
Sbjct: 347 VEKLLRDAKIFQIFEGSNEIQRIVVAN 373


>gi|70986020|ref|XP_748512.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66846141|gb|EAL86474.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
          Length = 429

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 30/184 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K  DG  Y ++G  KW  +   SD   M  +  G     +
Sbjct: 160 IAITEPEAGSDVANITTTATKTPDGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGAAGL 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---- 309
              LVP     G P G+  +RLK   G  +  T  +E        L D+ V  G +    
Sbjct: 220 SVILVPL---KGYP-GVTMRRLKVS-GQITGGTTYIE--------LDDVKVPVGNLIGRE 266

Query: 310 -EDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            + M+I++       L  A+      RV+LA A  Y  +R   G  L+DQPV++  +A  
Sbjct: 267 GDGMRIIMTNFNHERLTIAVGVTRQARVALAAAFEYTMKREAFGKTLMDQPVVRHRLAKA 326

Query: 363 ALDI 366
             ++
Sbjct: 327 GAEL 330


>gi|32130423|sp|P51174|ACADL_MOUSE RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|20071667|gb|AAH27412.1| Acyl-Coenzyme A dehydrogenase, long-chain [Mus musculus]
 gi|187465939|emb|CAQ52312.1| acyl-Coenzyme A dehydrogenase, long-chain [Mus musculus]
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P       IG + +TE   G+D+  + +  ++ S   + L+G K F+++  +SD  I++A
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKR-SGSDWILNGSKVFITNGWLSDLVIVVA 217

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
               E R     +   L +    G    R  +K+G ++  T EL F +       LLG+ 
Sbjct: 218 VTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEE 277

Query: 303 N------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +   P E + I      A +++S       E  +Y ++R   G  +     ++
Sbjct: 278 NKGFYYLMQELPQERLLI------AELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQ 331

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  E +
Sbjct: 332 HKLAELKTHICVTRAF-------VDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECV 384

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 385 QLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|302348382|ref|YP_003816020.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
 gi|302328794|gb|ADL18989.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
          Length = 384

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 34/268 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252
             L+E   GTD AAIT++ +K  D  Y ++G K W  +SP +D F++ A+    E R   
Sbjct: 120 FALSEPCCGTDAAAITTRAEKDGDE-YVINGRKTWITNSPYADFFLVAARTGTPEQRHRG 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
           V  F+V +        G C +  K + +G R + T E+ F       +N  G L G   +
Sbjct: 179 VSLFVVDK--------GSCVEVSKLDMMGYRGSGTSEVLFKDCRVPEANMVGQLNGGFKI 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + + +++    +A  ++     +  +++ YA++R   G  + +  +++  +A++ +
Sbjct: 231 VMDTLNEGRVV----TAATALGLAEAAFEDSLAYAKQRESMGVPIAEHQMVQYMLAEMKV 286

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A   L +  A   D      E   ++ +       W   +A      A++  GG GY
Sbjct: 287 RVEAIKQLIYEAARRVDAGD--PEYPMWSSMAKLAAAEWGVDVARM----AVQVEGGFGY 340

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
            +E  + R YR+     I  G+  A  L
Sbjct: 341 SKESLVERIYRDVKMVEIGDGTNEAQRL 368


>gi|109484416|ref|XP_001053896.1| PREDICTED: Isobutyryl-CoA dehydrogenase, mitochondrial-like [Rattus
           norvegicus]
          Length = 411

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G     + C 
Sbjct: 156 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRTGGSGPKGISCI 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F +              GFL+    +
Sbjct: 215 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGL 269

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     + + R   G  L     ++  +AD+A 
Sbjct: 270 NGGRI---------NVASCSLGAAHASVVLTQEHLKVRKQFGAPLARSQYLQFQLADMAT 320

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L  R A     A +  EE   A  +  + K +  +    +  +A++  GG GY
Sbjct: 321 KLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFVTEECFTICNQALQMHGGYGY 374

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 375 LKDYAVQQYMRDSRVHQILEGSNEVM 400


>gi|125978457|ref|XP_001353261.1| GA11516 [Drosophila pseudoobscura pseudoobscura]
 gi|195160203|ref|XP_002020965.1| GL25095 [Drosophila persimilis]
 gi|54642015|gb|EAL30764.1| GA11516 [Drosophila pseudoobscura pseudoobscura]
 gi|194118078|gb|EDW40121.1| GL25095 [Drosophila persimilis]
          Length = 419

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 25/258 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D+  I ++ +K  D  Y ++G K W  +  +++ + +LA+      C    
Sbjct: 155 GVTEPGAGSDVNGIKTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTNPDPKCPSSK 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                ++E  SP GL   R +  +G R++ T  + F +     +   NV  G     KI 
Sbjct: 214 AFTGFIVERDSP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIA 269

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ Y+  R   G  +     ++  +AD+A+ +   
Sbjct: 270 MGTFDKTRPPVAAGAVGLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGV-ET 328

Query: 370 TALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  E 
Sbjct: 329 SRLAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSEY 381

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 382 PVEKLMRDAKIYQIYEGT 399


>gi|332252999|ref|XP_003275640.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 438

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G    + NV  G          
Sbjct: 234 RGFLLEKGM-QGLSAPRIQGKFSLRASATGMIIMD---GVEAPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|297184171|gb|ADI20290.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 381

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 117/289 (40%), Gaps = 35/289 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + F          P   +   IG   L+E   G+D  +  +    + D  Y L+G K
Sbjct: 96  WGLEAFGSPEQKAKYLPRLASGEIIGSFCLSEPEAGSDATSQATTAVDMGDH-YLLNGTK 154

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +    +  +++AQ +   G   +  L+ +    G    + ++K+G R         
Sbjct: 155 NWITNGGTCEITLVIAQTDREKGHRGINALIVEKGMEGFVVGKKEDKLGIRG-------- 206

Query: 292 SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIH 337
           S+T   L  D+ V   P E+   +       A+ ++SG R+ +A             A+ 
Sbjct: 207 SDTHTLLFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAQGALDLALS 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  + +   +   +AD+ + I  A  L ++ A   D+     +E+A A++ A
Sbjct: 264 YSKERTTFGKPIHEHQAIAFKLADMEMKIEQARLLVYKAAWLKDQGMPYDKESAMAKLAA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                W       V  EA++  GG G+++E  + R  R++    I  G+
Sbjct: 324 SEAAMW-------VSTEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGT 365


>gi|299768694|ref|YP_003730720.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298698782|gb|ADI89347.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 390

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 40/328 (12%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--------KDWAPKIFSREYDPTNKAP 190
           RLY M  +E       S T  S+ + +    V+        + W PK+ + E        
Sbjct: 79  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYVNNFGNEEQKQKWLPKMATGE-------- 130

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
                V   + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  +++ +
Sbjct: 131 -----VVTAIAMTEPGTGSDLQAVRTTA--VVDGDDYVINGSKIFITNGYLCDMVVVVCK 183

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 G   +  ++ +    G    +  NKIG +   T EL F N       LLG    
Sbjct: 184 TGNNDKGSANLSLIIVEADRTGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG--ME 241

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  MK L +  +  AI+  +G   + A  + Y + R   G  +      +  +A++
Sbjct: 242 GMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPVSGFQNTRFKLAEL 301

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I        R      E K   E AA A       KY    M   V+ E ++  GG 
Sbjct: 302 RTEIDFCRTYLDRCMELQLEEKLSVEAAAAA-------KYKISDMFSKVVDECLQLHGGY 354

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y +  AN I  G+   M
Sbjct: 355 GYMLEYPIARAYIDHRANRIYAGTNEIM 382


>gi|219112849|ref|XP_002186008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582858|gb|ACI65478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 470

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLV 258
            GLTE   G+D + + ++ ++  + +       W  +SP +D FI+ A+ E G +  +LV
Sbjct: 208 FGLTEPNHGSDPSLMETRSRRDGNEVVLNGSKNWITNSPKADVFIVWARNEAGTIKGYLV 267

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316
            R    G+P GL    ++ K   R++AT  +   +    L  +L+V+   GP   +    
Sbjct: 268 DR----GTP-GLETPSIEGKFSLRASATGYIFLDDVRVPLENELSVAGLKGPFSCLNHAR 322

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           Y   A   +        +A  Y   R   G  L    ++++ +AD+  +IA   A   ++
Sbjct: 323 Y-GIAWGVLGAAEACFHQARSYTLERAQFGAPLAANQLVQKKLADMLTEIALGRAGCLQV 381

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +  +++ E       M  + K   C  A  +   A + +GG+G  +E  + RH
Sbjct: 382 GRLMESGRAQPE-------MISLLKRNNCGKALDIARVARDMLGGNGVSDEYHVIRH 431


>gi|254437510|ref|ZP_05051004.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|254440501|ref|ZP_05053995.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252956|gb|EDY77270.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198255947|gb|EDY80261.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 399

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 44/274 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG  GLTE   G+D   + ++  K   G   +  
Sbjct: 126 QKYLPKLSSGEY--------------IGCFGLTEPDAGSDPGGMKTRAIKTDSGYRLVGS 171

Query: 231 HKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             W  +SP++D F++ A+ E   G+V  F++ + ++     GL   ++  K+  R++ T 
Sbjct: 172 KMWISNSPIADVFVVWAKSEVHGGKVRGFVLEKGMK-----GLSAPKIAGKLSLRASVTG 226

Query: 288 ELEFSNT-FG--FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           E+  +N   G   +L +    +GP         L+ A   +S   +  AE   +  R++ 
Sbjct: 227 EIVMNNVEVGEEAILPNTEGMSGP------FGCLNRARYGISWGVMGAAEDCFHRARQYG 280

Query: 345 SGGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
                 D+P     + ++ +AD+  +IA     + R+   FDE +       +A  M  +
Sbjct: 281 LDRKQFDRPLAATQLYQKKLADMETEIALGLQAALRVGRLFDEGR-------FAPEMVSL 333

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            K   C  A  +   A +  GG+G      + RH
Sbjct: 334 IKRNNCGKALDIARHARDMHGGNGIQIGYHVMRH 367


>gi|88799696|ref|ZP_01115271.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88777590|gb|EAR08790.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 382

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 19/269 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +    + +G + L+G K F+++  M+D  I++A+ +   G    
Sbjct: 124 IAMTEPGTGSDLQGIKTNA-VLKNGRWILNGSKTFITNGYMADVVIVVAKTDPEAGSKGF 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L D    G    +   K+G ++  T EL F++     L +  +     + ++ L+  
Sbjct: 183 SLFLVDADTAGFEKGQPLKKVGMKAQDTCELFFNDC---SLDETQLLGERGQGLRYLMQE 239

Query: 318 -----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ +V+  R  + + + YA+ R+  G     +P+   A  +    +A   + 
Sbjct: 240 LPQERLSVAVGAVAHARSLVDQTLAYAKERNAFG-----KPIA--AFQNTQFKLAELDSE 292

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+  +   E     +MA   KY    +   V  E ++  GG GY+ E  +AR
Sbjct: 293 VTMMQVFIDQCLAWHVEGELDAVMAAKAKYLSTDLQCKVADECVQLHGGYGYMWEYPVAR 352

Query: 433 HYRESPANSILLGSGNAMVLDV-LNLLEK 460
            + ++    I  G+   M L +  +LLE+
Sbjct: 353 GWADARVQRIYAGTNEIMKLIISRDLLER 381


>gi|329897441|ref|ZP_08272096.1| Branched-chain acyl-CoA dehydrogenase [gamma proteobacterium
           IMCC3088]
 gi|328921201|gb|EGG28603.1| Branched-chain acyl-CoA dehydrogenase [gamma proteobacterium
           IMCC3088]
          Length = 386

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 118/305 (38%), Gaps = 41/305 (13%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + SM+     P + + W P++            +  T +A    LTE   G+D A++ S 
Sbjct: 93  ATSMIGKYANPEIIEQWCPEL------------VMGTKLA-SYCLTEPGAGSDAASLRSS 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  D  Y ++G K F+S   S   ++     G  G   V   L      G+ Y + + 
Sbjct: 140 AVRDGDH-YVVNGAKVFISGAGSTDVLVAMLRTGDAGAKGVSAFLIPADAEGISYGKKEE 198

Query: 278 KIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           K+G  +  T  + F N              GF +    +  G +         + A  SV
Sbjct: 199 KMGWNAQPTRMISFDNVRVPVANRLGKEGQGFAIAMEGLDGGRI---------NIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EA  Y + R      + +    +  +AD+  ++ AA  +  RLA +F    +
Sbjct: 250 GTAQQALVEATAYVQERQQFNQSIAEFQATQFRLADLQTELVAARTM-VRLA-AFKLDAN 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +   Y      + K +       V  +A++  GG GYI E  + R  R++  + IL G
Sbjct: 308 DPQATTYC----AMAKRFATDAGFDVCNQALQLFGGYGYIREYPMERFVRDTRVHQILEG 363

Query: 446 SGNAM 450
           +   M
Sbjct: 364 TNEVM 368


>gi|307213064|gb|EFN88595.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Harpegnathos saltator]
          Length = 422

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 29/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GR---- 252
           L ++E   G+D+ ++  + +K  D  Y LSG+K W  + P +D  I+ A+    G+    
Sbjct: 161 LAMSEAGSGSDVVSMKLKAEKKGD-YYILSGNKFWITNGPDADTLIVYAKTNPNGKPQHG 219

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +  F++ R +E  S      Q+L +K+G R + T EL F +       +LG++N   G  
Sbjct: 220 ITAFIIERGMEGFSTG----QKL-DKVGMRGSNTSELIFEDCKVPAANVLGEVN--KGVY 272

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                L Y +  I++   + VS++       YA  R      L    +++  +AD+   +
Sbjct: 273 VLFSGLDY-ERLILAAGPLGVSMSCCDVTFEYAHTRKQFDQYLAKFQMIQSKLADMYTRL 331

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A +  + +A S D  +   ++ A   +       +  + A     +AM+ +GG+GY  
Sbjct: 332 CSAKSYLYTIARSADAGERSRKDCASVLL-------FNTENAVKTALDAMQILGGNGYTN 384

Query: 427 ERSIARHYRESPANSILLGS 446
           + S+ R  R++    I  G+
Sbjct: 385 DYSVGRLLRDAKLYDIGAGT 404


>gi|319948804|ref|ZP_08022920.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319437511|gb|EFV92515.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 388

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 40/296 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    ++W PK+ S E             V   + +TE   G+D+  I ++  +  D  Y
Sbjct: 106 TEEQKREWLPKMASGE-------------VVTAIAMTEPGTGSDLQGIKTKAVREGDD-Y 151

Query: 227 CLSGHKWFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            ++G K F+++      +++A      Q    V   +VP      S  G    RL  KIG
Sbjct: 152 VINGAKTFITNGYHADMVLVACKTSPDQAAAGVSLVIVPT-----SSEGFRRGRLLGKIG 206

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEA 335
            +   T EL F +       LLG      G V+ M  L    L  A+   + M + L   
Sbjct: 207 LKGQDTCELFFDDVRVPSSNLLG-TEEGQGFVQLMMQLPQERLIVAVSCAASMDLMLDLT 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYAR 394
             Y   R   G  +      K  +A++A +         R+  +F DE      ++    
Sbjct: 266 HEYTLTREAFGKPIFGFQNTKFKLAEVATEA--------RVTRAFIDECLDLHVKSELDI 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + KYW  + A  V    ++  GG GY+EE  IAR + +   + I  G+   M
Sbjct: 318 PTAAMAKYWSSERAQQVADTCLQLHGGYGYMEEYPIARAWTDLRVSQIYAGTTEIM 373


>gi|268592063|ref|ZP_06126284.1| crotonobetainyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
 gi|291312456|gb|EFE52909.1| crotonobetainyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
          Length = 380

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPR 260
           +TE   G+D+ ++ +  Q+ +  +Y L+G K F++S     +I++   +       +   
Sbjct: 124 ITEPGAGSDVGSLQTTYQRRNGKVY-LNGSKCFITSSAYTPYIVVMSRDADSPDKPVFTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F N        FG      N      +  +
Sbjct: 183 WFLDMSKPGIKVNKLE-KLGLRMDSCCEITFDNVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMRNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G   E  IAR 
Sbjct: 298 YETAWKSDNGLITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGEHRIARF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|197295058|ref|YP_002153599.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|195944537|emb|CAR57140.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 616

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 126/315 (40%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   +Y + G K ++S+ M +      +
Sbjct: 148 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDVYAIDGEKVYISAGMHELTENTLY 207

Query: 244 IMLAQVEG------RVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEF- 291
            +L +++        + C +VPR   D       PN +    L  K+G +  A   L F 
Sbjct: 208 FVLGRIDTASPDSFSLSCLVVPRFWPDDETGELQPNHVDCIGLPRKMGLKGCANTHLVFG 267

Query: 292 --SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
               T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 268 ANGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 322

Query: 344 VSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
               I            +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 323 QGRPIERASNTNAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 382

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 383 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 442

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 443 SIWEGTNYIQAQDLV 457


>gi|300118018|ref|ZP_07055767.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus SJ1]
 gi|298724603|gb|EFI65296.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus SJ1]
          Length = 382

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNIRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYTVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|282866007|ref|ZP_06275055.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559046|gb|EFB64600.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 404

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 57/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
           TP    +W P+ F  E  P   A            ++E + G+D++A+ ++ +   +   
Sbjct: 104 TPDQLAEWVPQCFGDEDAPKVAA----------FCVSEPQAGSDVSAMRTKARYDEAKDE 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKI 279
           + LSG K W  +  +++  +++A V+  +G      F+VP     G+P GL   R   K+
Sbjct: 154 WVLSGQKAWITNGGIAEIHVVVASVDPALGSRGQAAFVVP----PGTP-GLAASRTVKKL 208

Query: 280 GNRSNATVELEFSNT---FGFLLG-------------DLNVSTGPVEDMKILIYLDSAIM 323
           G R++ T ++   +       LLG             +   + G        +   +   
Sbjct: 209 GLRASHTADVFLDDVRVPGHCLLGGKERLDARLARAREGTTAKGQAAMATFEVSRPTVAA 268

Query: 324 SVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
              G+ R +   A+ YA  R   G  +I+   +  A+ADI  +I A   L ++ A     
Sbjct: 269 QALGIARAAYEYALEYAGEREAFGRRIIENQSIAFALADIRTEIEAVRLLIWQAAWMARN 328

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +FD  +              ++K    ++A     +A++ +GG+GY  E  + R YR+
Sbjct: 329 DRTFDAGQG------------SMSKLRAGELAVTATEKAVQILGGAGYSREHPVERMYRD 376

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 377 AKIYTIFEGT 386


>gi|288932790|ref|YP_003436850.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288895038|gb|ADC66575.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 415

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 26/294 (8%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           R  ++W  + F +        P+ +       GLTE RGG+D    T++ +K  +  + L
Sbjct: 103 RFGQEWQKEEFLK--------PLIRGKKIAAEGLTEPRGGSDFFGTTTKAEKKGNK-WIL 153

Query: 229 SGHKWFLSS-PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G K F++   ++D +++ A+ +        +  F+V R +      G+  + L N +G 
Sbjct: 154 NGAKRFIAGGKVADFYLIYARTDPNAPGHKALTAFIVERDM------GVEIEDLHNLMGF 207

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +   T  + F N      + +G++N +      M I   L SA  +V   R ++  A+ Y
Sbjct: 208 KGMGTARIAFKNLEVPDEYRIGEVNGARIVFNRMMIPERLTSAAGAVGLARAAIEIAMKY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           + +R   G  + +   +   +A+    + AA  L +  A + D+  +   +    R ++ 
Sbjct: 268 SDKRKAFGRKIREFQGVSFKVAESVAKLDAARYLVYAAARAADDYDAGKSKVDPRRFVSE 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             KY   +    ++  AM+ +GG GY +   + R  R+     I  GS   M L
Sbjct: 328 -AKYLATEFGWEIVNNAMQILGGIGYTQVYPVERMLRDMRLAPIWTGSNEIMKL 380


>gi|254393025|ref|ZP_05008188.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706675|gb|EDY52487.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 386

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 27/275 (9%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--G 254
            GLTE  GG+D     T+  +  + G + ++G K F+++  +D    + +  V GR   G
Sbjct: 123 FGLTEPEGGSDAGGTRTTAVRDEAAGEWVINGSKCFITNAGTDITGLVTVTAVTGRTPEG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             L+  ++      G       +K+G  ++ T EL F         L+G+          
Sbjct: 183 KPLISSIIIPSGTPGFTVAPAYSKVGWNASDTRELAFDGVRVPLANLVGEEGRGY----- 237

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + L  LD   +++S +   LA     E++ YAR+RH  G  +     ++  IAD+ +  
Sbjct: 238 AQFLRILDEGRIAISALATGLAQGCVDESVAYARQRHAFGRPIGANQSIQFKIADMEMRA 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A          + +A SR       +  A + K +   +A     +A +  GG G++ 
Sbjct: 298 HMARV-------GWRDAASRLVLGEPFKKQAALAKLYSSTVAVDNARDATQIHGGYGFMN 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 351 EYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 383


>gi|118464925|ref|YP_880805.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166212|gb|ABK67109.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 397

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           PM    V     LTE   G++ A + ++   ++DG  + +SG K F++ +P+++ F++ A
Sbjct: 118 PMAAGDVVASFALTEPGAGSNPAGLRTK--AVADGDNWVISGQKRFITNAPVANLFVVFA 175

Query: 248 QV-----EG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +      +G  +  FLVP         G+       K+G     T ++ F +    + GD
Sbjct: 176 RTRPADDQGPGIAVFLVP-----ADAAGVQIGAKDAKMGQEGAWTADVSFDDVR--VGGD 228

Query: 302 LNVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             +  G  ED+     + S        A ++V   + +L E++ YA      G  + +  
Sbjct: 229 ALI--GGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSYASTATQGGTPIGNFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD   ++ A  AL    A  +   + R       R+     K +C +MA  V  
Sbjct: 287 LVQAMLADQQTEVLAGRALVREAARLWVTGEDR-------RVAPSAAKLYCTEMAGRVAD 339

Query: 414 EAMECIGGSGYIEERSIARHYRE 436
            A++  GGSGY+    + R YR+
Sbjct: 340 LAVQVHGGSGYMRGVPVERIYRD 362


>gi|17988557|ref|NP_541190.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|265990382|ref|ZP_06102939.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984354|gb|AAL53454.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|263001051|gb|EEZ13741.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 381

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A++ G     +  F
Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARMGGSGPSGISAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           L  R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 184 LAERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 238 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351

Query: 432 RHYRE 436
             YR+
Sbjct: 352 HFYRD 356


>gi|113866198|ref|YP_724687.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113524974|emb|CAJ91319.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 393

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 22/285 (7%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP     + PK+ S E+              IG L ++E   G+D+ ++  + +   D  
Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAEFKGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K W  + P  D  ++ A+ E  +G   +   + +    G    +  +K+G R +
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYAKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341
            T EL F +    +   L    G  + +   +  + A++S   V  M+  +     Y   
Sbjct: 214 HTGELVFQDVEVPVENILGAENGGAKVLMSGLDYERAVLSGGPVGIMQACMDVVTPYIHD 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +AD+   + AA +  + +  + D   S           A I  
Sbjct: 274 RKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYTVGKNLDALGSGHVRQVRKDCAAVI-- 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A  +  E ++ +GG+GYI E    R +R++    I  G+
Sbjct: 332 LYTAEKATWMAGETVQILGGNGYINEYPAGRLWRDAKLYEIGAGT 376


>gi|270157177|ref|ZP_06185834.1| isovaleryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289164420|ref|YP_003454558.1| acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269989202|gb|EEZ95456.1| isovaleryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857593|emb|CBJ11431.1| putative acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 386

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+ ++    +   +  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 127 LAMSESNSGSDVVSMQLDARPAGNK-YILNGTKMWITNGPDADVLVVYAKTDKHAASKGI 185

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              L+E G P     Q+L +K+G R + T EL F         +LG++N      + +K+
Sbjct: 186 TAFLIEKGMPGFKTAQKL-DKLGMRGSNTCELVFEECEVPEEQVLGEVN------QGVKV 238

Query: 315 LIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAA 368
           L+  LD     ++   V + +A       +V      +QP+     ++  +AD+  D++A
Sbjct: 239 LMSGLDYERTILAAGPVGIMQACMDVVLPYVHERKQFEQPIGEFQFIQGKLADMYTDLSA 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A  + +A + D+     ++AA   +       +  + A  +  +A++ +GG+GYI E 
Sbjct: 299 SRAYLYTIAKACDQGMVSRKDAASVIL-------YTAERATQMALQAIQILGGNGYINEY 351

Query: 429 SIARHYRESPANSILLGS 446
              R  R++    I  G+
Sbjct: 352 PTGRLLRDAKLYEIGAGT 369


>gi|229185304|ref|ZP_04312488.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus BGSC
           6E1]
 gi|228598224|gb|EEK55860.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus BGSC
           6E1]
          Length = 395

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 259 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 318

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 319 DEAEDKLSLQAELAAV-----KYTVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|222096574|ref|YP_002530631.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Q1]
 gi|221240632|gb|ACM13342.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Q1]
          Length = 382

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTIGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|220915509|ref|YP_002490813.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953363|gb|ACL63747.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 591

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L G K F+++   ++ F + A+V+ +    FLV
Sbjct: 146 LTEPEAGSDAMGGKATATLSPDGKHYLLDGTKQFITNGSFANLFTVFAKVDRKHFTAFLV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G + ++T  + F +       +LG+  +  G      +L
Sbjct: 206 ERTF-----PGVTVGPEEKKLGIKGSSTTSVIFESAKVPVENVLGE--IGKGHKIAFNVL 258

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  +++LA    YA  R   G  +     ++  +AD A  + A+ +
Sbjct: 259 NVGRFKLGAAVTGAA--KLALATGAAYANARKQFGTPIARFGAIREKLADQAAAVYASES 316

Query: 372 LSFRLANSFDE--AKSRSEEAAYAR----------IMAPITKYWCCKMAPAVIAEAMECI 419
           L +RLA   D+  A   +++  Y            I   I K +C ++   V+ E ++  
Sbjct: 317 LIYRLAGLIDDRLATIPADQPGYYEAYQQGIEEYAIECAIAKVFCSEVLADVVDEVVQIH 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G+I+E    ++YR+   N I  G+
Sbjct: 377 GGYGFIQEYPAEKYYRDERINRIFEGT 403


>gi|145353314|ref|XP_001420963.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145357449|ref|XP_001422931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581199|gb|ABO99256.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583175|gb|ABP01290.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 429

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 23/277 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           AP  +    I L +TE   G+D+A I  + +    G  Y ++G K W  +   +D F + 
Sbjct: 144 APCLRGEGIICLAITEPYAGSDVANIRCEAKLDPSGKFYRVTGEKKWITNGIWADYFTVA 203

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
            +  G     +   ++E   P   C  R  + +G  ++ T  + F +       L+G  N
Sbjct: 204 VRTGGPGMGGISLLVIERSMPGVDC--RRMDCMGVWASGTTFITFEDVKVPVENLIGKEN 261

Query: 304 VSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                 E  K +++          I +    RV   E+  YA RR   G  LI+ PV++ 
Sbjct: 262 ------EGFKYIMHNFNHERWGFVIQANRFARVCYEESFKYAHRRRTFGKKLIEHPVIRH 315

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++   + A   L   +    +         A A I A + K    K+      EA +
Sbjct: 316 KLAEMIRQVEATHYLLETITYQMNTMTKEESSKALAGITA-LAKVQSTKVFEFCAREAAQ 374

Query: 418 CIGGSGYI---EERSIARHYRESPANSILLGSGNAMV 451
             GG+ Y+   +   I R YR+  A +I  GS   M+
Sbjct: 375 VFGGASYVRGGQGEKIERLYRDVRAYAIPGGSEEIML 411


>gi|41408507|ref|NP_961343.1| FadE25_3 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396863|gb|AAS04726.1| FadE25_3 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 397

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           PM    V     LTE   G++ A + ++   ++DG  + +SG K F++ +P++D F++ A
Sbjct: 118 PMAAGDVVASFALTEPGAGSNPAGLRTK--AVADGDNWVISGQKRFITNAPVADLFVVFA 175

Query: 248 QV-----EG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +      +G  +  FLVP         G+       K+G     T ++ F +    + GD
Sbjct: 176 RTRPADDQGPGIAVFLVP-----ADAAGVQVGAKDAKMGQEGAWTADVSFDDVR--VGGD 228

Query: 302 LNVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             +  G  E++     + S        A ++V   + +L E++ YA      G  + +  
Sbjct: 229 ALI--GGSENIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD   ++ A  AL    A  +   + R       R+     K +C +MA  V  
Sbjct: 287 LVQAMLADQQTEVLAGRALVREAARLWVTGEDR-------RVAPSAAKLYCTEMAGRVAD 339

Query: 414 EAMECIGGSGYIEERSIARHYRE 436
            A++  GGSGY+    + R YR+
Sbjct: 340 LAVQVHGGSGYMRGVPVERIYRD 362


>gi|254460445|ref|ZP_05073861.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206677034|gb|EDZ41521.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 562

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 46/304 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P++ S +  PT          A+    TE   G
Sbjct: 257 GSLGTRSEIAAELIIAGGTEEQKQKWLPQLASADTLPT----------AV---FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ A+ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 304 SDLGALRTRAVKDGNGDYRVTGNKTWITHATRTQIMTLLARTDPETDNYKGLSMFLAEKT 363

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
           P   E+  P  G+    ++  +G R     EL F    GF +   N+  G  E+ K    
Sbjct: 364 PGTEENPFPTEGMTGGEIE-VLGYRGMKEYELAFD---GFHVKGENLLGG--EEGKGFKQ 417

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++   +SA +  +   + +A++     + YA  R   G  LI+ P +   +A +A++I  
Sbjct: 418 LMETFESARIQTAARAIGVAQSALDIGMQYAEERKQFGKSLINFPRVSSKLAMMAVEIMV 477

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE +    EA  A+++         ++A A    A++  GG+G+  E 
Sbjct: 478 ARQLTYFSAREKDEGRRCDLEAGMAKLLG-------ARVAWAAADNALQIHGGNGFALEY 530

Query: 429 SIAR 432
            I+R
Sbjct: 531 KISR 534


>gi|84684713|ref|ZP_01012613.1| acyl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667048|gb|EAQ13518.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 381

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ +K ++G + L+G K F+S    SDA++ + +        +   
Sbjct: 124 LTEPGSGSDAAALRTKAEKTNEG-WKLNGTKAFISGGSYSDAYLTMVRTGDDGPKGISAM 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++EDG+  GL +  L++K+G ++  T +++F +              GF+     +  G 
Sbjct: 183 VIEDGA-TGLSFGGLEDKMGWKAQPTAQVQFDDCVVPHENLMGEEGRGFVYAMAGLDGGR 241

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  ++ G + +L   + Y   R   G  +     ++  +AD  + + A
Sbjct: 242 ---------LNIAASALGGAQNALNLTLAYMGERKAFGKTIDQFQALQFRLADNEIKLQA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A     + A   D       +A  A     + K +   +A  V  + ++  GG GY+ + 
Sbjct: 293 ARTFLRQAAWKLD------NKAHDATKFCAMAKMFVTDVAFDVANDCLQLHGGYGYLADY 346

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            I +  R+   + IL G+   M L V
Sbjct: 347 GIEKIVRDLRVHQILEGTNEIMRLIV 372


>gi|308388188|pdb|3OWA|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388189|pdb|3OWA|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388190|pdb|3OWA|C Chain C, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388191|pdb|3OWA|D Chain D, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
          Length = 597

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 49/357 (13%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 112 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 164

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 165 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 219

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 220 STSPEEKKXGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 277

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A+ A    AA +  +R    F+   S
Sbjct: 278 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANXAAKTYAAESSVYRTVGLFESRXS 337

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G+  E  I R
Sbjct: 338 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFXAEYEIER 396

Query: 433 HYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLG 477
            YR+S  N I  G+     L V            L LL+K   L E+L     +++G
Sbjct: 397 XYRDSRINRIFEGTNEINRLIVPGTFLRKAXKGELPLLQKAQKLQEELXXXXPEEVG 453


>gi|269124719|ref|YP_003298089.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309677|gb|ACY96051.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 387

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 115/288 (39%), Gaps = 50/288 (17%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           TSVA+    TE   G+D A +  Q + + DG  Y L+G K W  ++P+S  F++ A V+ 
Sbjct: 129 TSVAV----TEPGVGSDAAGL--QTRAVRDGDHYVLNGVKTWISNAPLSQYFVVFATVDP 182

Query: 252 R-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------ 294
                 V  FLV R  E     G+       K G R     E+   N             
Sbjct: 183 SKRARGVTAFLVERDRE-----GVTVGAPMKKYGQRGTLNAEVFLENVRVPVENRLGEEG 237

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
             F  L+   + S       +ILI   +  +S    R  L +A+ YA+ R   G  +I+ 
Sbjct: 238 KGFYGLMRTFDAS-------RILIGAAATGLS----RAILEDAVQYAKERTQFGKPIIEH 286

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A     +  ++ R A  FD  K  +  +A A+++A     W         
Sbjct: 287 QAVAFRLADMAAKTDISHLVTMRAARLFDAGKPVTAASAIAKVVASENTTWVANA----- 341

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              +   GG GY  E  + +  R++    +  G+ +   L +   L K
Sbjct: 342 --GLLTHGGWGYSREFMVEKWLRDAKLEELEEGTSDIQRLIISRSLAK 387


>gi|218291045|ref|ZP_03495077.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238999|gb|EED06205.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 404

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE---GRVG--C 255
           LTE   G+D++ I +  +K+ DG Y L+GHK ++++    ++++  A V+   GR G   
Sbjct: 139 LTEPGAGSDVSGIRTSAKKV-DGGYVLNGHKVYITNGGRASWVVTFATVDPSLGRAGHRA 197

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVST--GPV 309
           F+V    E G+P   C  R+ +K+G R++ T EL F + F      L G+ +     G  
Sbjct: 198 FVV----EKGAPGFTC-TRVAHKMGLRASETAELVFEDCFVPIDNLLGGEAHYENRAGSS 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +   DS    V+ M V +A A     + + +R +  G  +    + K  + ++  
Sbjct: 253 GFRVAMSTFDSTRPIVAAMAVGIARAAYEYTLEFVKREYPRGQRVRHDVLAK--LGEMDA 310

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L++  A   D  +  ++EAA  +  A        +++  V ++ +E +G  G 
Sbjct: 311 KIHAARLLTWEAAWKADLGQPNAKEAAMCKAHA-------GRISLEVCSDCLEIMGPIG- 362

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++   + + YR+     I  G+     L V   L
Sbjct: 363 LDGHLVEKLYRDVKVFDIFEGTNQIQHLIVARRL 396


>gi|52842786|ref|YP_096585.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295416|ref|YP_127831.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
 gi|54298568|ref|YP_124937.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
 gi|52629897|gb|AAU28638.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53752353|emb|CAH13785.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
 gi|53755248|emb|CAH16742.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
          Length = 385

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 45/305 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A++ +  +KI  G + L+G K W  +
Sbjct: 107 FGSEEQKKRYLPEMAAGNIIGCFGLTEPDSGSDPASMRTHAKKIEGG-WILNGAKMWITN 165

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +P++D  I+ A+ E  +  F+V     D    G+    +K K+  R++ T EL F N F 
Sbjct: 166 APIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLRASITGELVFDNVF- 219

Query: 297 FLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE------------AIHYAR 340
                       V D  +L      L +A+  +S  R  +A             A  Y  
Sbjct: 220 ------------VPDENLLPKSEKGLGAALSCLSQARYGIAWGAMGAAMACFDIARDYLL 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M  + 
Sbjct: 268 ERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMISLA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L VL     
Sbjct: 321 KGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLGRHIT 379

Query: 461 GTNLF 465
           G N F
Sbjct: 380 GINAF 384


>gi|48425405|pdb|1RX0|A Chain A, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425406|pdb|1RX0|B Chain B, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425407|pdb|1RX0|C Chain C, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425408|pdb|1RX0|D Chain D, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND
          Length = 393

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 138 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 196

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 197 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 246

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 247 ----AVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMAT 302

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R A     A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 303 RLVAAR-LMVRNA-----AVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 357 LKDYAVQQYVRDSRVHQILEGSNEVM 382


>gi|242817405|ref|XP_002486949.1| acyl-CoA dehydrogenase [Talaromyces stipitatus ATCC 10500]
 gi|218713414|gb|EED12838.1| acyl-CoA dehydrogenase [Talaromyces stipitatus ATCC 10500]
          Length = 437

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 31/275 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   TP   K W P + S            KT     LG+TE   G+D+A I++  
Sbjct: 130 APSIARFGTPEQRKRWLPGVAS-----------GKTRFC--LGITEPDAGSDVANISTTA 176

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   D  Y ++G K ++++ +   +   A   G  G   V  L+      G+  +R+ N 
Sbjct: 177 KTEGD-YYIVNGAKKWITNGLWADYCTAAVRTGGPGRKGVSVLVIPLKQKGVTRKRMHNS 235

Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMR 329
             N S +T  LEF +       L+G +N      E  +I++       L  A  ++   R
Sbjct: 236 GVNASGSTF-LEFDDVRVPADHLIGRVN------EGFQIVMSNFNSERLSLACAALRLAR 288

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           V + +A +YA +R   G  LI +  ++  I    + I  A +   +L    +  K R   
Sbjct: 289 VCVEDAFNYAVQRETFGAPLITRQAIQFKITKCGMLIEPAQSFLEQLVYIIETTKDRP-N 347

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A     M  + K    +     + EA +  GG+GY
Sbjct: 348 AGNIGGMTALLKVMSTRALEKCVREAQQIFGGAGY 382


>gi|147769055|emb|CAN70218.1| hypothetical protein VITISV_000576 [Vitis vinifera]
          Length = 399

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 13/229 (5%)

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG Y L+G+K W  + P++   ++ A+ +       +   ++E G P     Q+L +K+G
Sbjct: 163 DGGYILNGNKMWCTNGPIAQTLVVYAKTDITAHSKGITAFIIEKGMPGFSTAQKL-DKLG 221

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIH 337
            R + T EL F N F      L      V  M   + L+  +++      M+  +   + 
Sbjct: 222 MRGSDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACIDVVLP 281

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +   ++  +AD+   + ++ +  + +A + +  K   ++ A   + A
Sbjct: 282 YVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSYVYSVARNCENGKIDPKDCAGVILCA 341

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   + A  V  +A++C+GG+GY+ E    R  R++    I  G+
Sbjct: 342 A-------ERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 383


>gi|6981112|ref|NP_036724.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Rattus
           norvegicus]
 gi|125052|sp|P12007|IVD_RAT RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|204982|gb|AAA41454.1| isovaleryl-CoA dehydrogenase precursor (EC 1.3.99.10) [Rattus
           norvegicus]
 gi|56970429|gb|AAH88401.1| Isovaleryl coenzyme A dehydrogenase [Rattus norvegicus]
 gi|149022989|gb|EDL79883.1| isovaleryl coenzyme A dehydrogenase, isoform CRA_a [Rattus
           norvegicus]
          Length = 424

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 47/295 (15%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S E+              IG L ++E   G+D+ ++  + +K  D  Y L+G
Sbjct: 148 EKYLPKLISGEF--------------IGALAMSEPNAGSDVVSMRLKAEKKGDH-YVLNG 192

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282
           +K W  + P +D  ++ A+ +       VP        ++E   P G    +  +K+G R
Sbjct: 193 NKFWITNGPDADVLVVYAKTD----LTAVPASRGITAFIVEKDMP-GFSTSKKLDKLGMR 247

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336
            + T EL F +     +   N+ +   + + +L+  LD   + ++G     M+  L   I
Sbjct: 248 GSNTCELVFEDC---KVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTI 304

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 305 PYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEGHITAKDCAGVIL- 363

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 +  + A  V  + ++C+GG+GYI +  + R  R++    I  G G + V
Sbjct: 364 ------YTAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GGGTSEV 410


>gi|115526349|ref|YP_783260.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520296|gb|ABJ08280.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 404

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 33/247 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K++DG Y LSG K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTKAEKVADG-YRLSGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEEALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366
                L+ A   +S G+  +  +    AR     RR  +  +   Q V K+ +AD+  +I
Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCFERARQYTLDRRQFNRPLAATQLVQKK-LADMETEI 312

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A     S R+    DE K   E       M  + K   C  A  +   A +  GG+G   
Sbjct: 313 ALGLQASLRVGRLMDEGKMAPE-------MISLVKRNNCGKALDIARVARDMHGGNGIQI 365

Query: 427 ERSIARH 433
           E  + RH
Sbjct: 366 EYHVMRH 372


>gi|326779196|ref|ZP_08238461.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326659529|gb|EGE44375.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 388

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 54/318 (16%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG--QK 220
           L  T    + W PK+ + E              A+G  GLTE  GG+D     +     +
Sbjct: 102 LFGTEEQKRQWLPKLCAGE--------------ALGAFGLTEPDGGSDAGGTRTTAVLDE 147

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +D  + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 148 ATD-EWVINGSKCFITNSGTDITELVTVTAVTGRKEDGRPRISAIIVP----SGTP-GFT 201

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F++       LLG+           + L  LD   +++S +
Sbjct: 202 VAAPYSKVGWNASDTRELSFTDVRVPASNLLGEEGRGYA-----QFLRILDEGRIAISAL 256

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA  RH  G  +     ++  IAD+ +    A          + +A
Sbjct: 257 ATGLAQGCVDESVKYAAERHAFGRAIGTNQAIQFKIADMEMRAHMARV-------GWRDA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A I K +   +A     EA +  GG G++ E  +AR +R+S    + 
Sbjct: 310 ASRLVAGEPFKKEAAIAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILE 367

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 368 IGEGTSEVQRMLIARELG 385


>gi|261338785|gb|ACX70074.1| RH10980p [Drosophila melanogaster]
          Length = 644

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 179 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 225

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 226 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 284

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 285 PPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 341

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 342 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 400

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG GY+ +  + R  R+     I  G
Sbjct: 401 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGYMVDNGLERVLRDLRIFRIFEG 453

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 454 TNDILRL 460


>gi|320035887|gb|EFW17827.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 547

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 271 ICLAITEPDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMN 330

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +    G+  +R+  + G  S+ T  + F         D+ V   PVE++    
Sbjct: 331 GVSVLLIEREFEGVSTRRMDCQ-GVWSSGTTYITFE--------DVKV---PVENLIGKE 378

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I S+   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 379 NRGFKVIMTNFNHERIGIVIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 438

Query: 363 ALDIAAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAM 416
           A  I A+      + ++  N  D   S     A A + A  T    +C + A  +     
Sbjct: 439 ARQIEASHNWLENIIYQCQNYEDMEASLRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 498

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 499 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 529


>gi|316932637|ref|YP_004107619.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600351|gb|ADU42886.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 404

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K++DG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTKAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 FVLEKGMK-----GLSAPKVGGKLSLRASITGEIVMDGVVVPEENLLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +  R++       ++P     ++++ +AD+  +I 
Sbjct: 256 --FGCLNRARYGISWGAMGAAEDCFHRARQYTLDRKQFNRPLAATQLVQKKLADMETEIT 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|303321273|ref|XP_003070631.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240110327|gb|EER28486.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 551

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 275 ICLAITEPDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMN 334

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +    G+  +R+  + G  S+ T  + F         D+ V   PVE++    
Sbjct: 335 GVSVLLIEREFEGVSTRRMDCQ-GVWSSGTTYITFE--------DVKV---PVENLIGKE 382

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I S+   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 383 NRGFKVIMTNFNHERIGIVIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 442

Query: 363 ALDIAAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAM 416
           A  I A+      + ++  N  D   S     A A + A  T    +C + A  +     
Sbjct: 443 ARQIEASHNWLENIIYQCQNYEDMEASLRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 502

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 503 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 533


>gi|297563091|ref|YP_003682065.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847539|gb|ADH69559.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 38/336 (11%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  +  +V ++  + RA+ L +  Q     +M+P +        +T     + W P   S
Sbjct: 67  DFRYNTIVNEEICRARASGLGVTLQ---NDVMAPYMVD------LTDEEQKRRWLPGFAS 117

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
            E             +   + +TE   G+D+  I +   +  D  Y ++G K F+++ + 
Sbjct: 118 GE-------------LITAIAMTEPGAGSDLQGIATSAVRDGDE-YVVNGSKTFITNGVN 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           +D  I++A+ +   G      +  +    G    R  +KIG ++  T EL F +      
Sbjct: 164 ADLVIVVARTDPDAGAQGFSLIAVERGAAGFTRGRNLDKIGMKAQDTAELFFDDVRVPAA 223

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            L+G      G V  M+ L    L  A  +V+     L   I Y R R   G  +     
Sbjct: 224 NLIG--REGGGFVHLMENLPQERLSIATCAVASADAVLQHTIAYCRERTAFGRPIGRFQN 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A++A ++  A     R     +  +   E+AA A       K+W  ++   V+  
Sbjct: 282 TRFVLAELATEVDIARTYVDRGIGLLNRGELTVEDAAMA-------KWWTTELCNKVVDR 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  +AR ++++   +I  G+   M
Sbjct: 335 CLQLHGGYGYMMEYPVARAWQDTRVQTIYGGTTEIM 370


>gi|225686848|ref|YP_002734820.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256110975|ref|ZP_05452043.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|225642953|gb|ACO02866.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|326411265|gb|ADZ68329.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554554|gb|ADZ89193.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           L  R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LAERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|149371980|ref|ZP_01891299.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149355120|gb|EDM43681.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 392

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 39/249 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   + +  + + D  Y L+G K W  +SP  D  ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPGGMVTNFKDMGDH-YLLNGAKMWISNSPFCDIAVVWAKNEEGRIHGLV 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V R +E     G       NK   R++AT EL F         D+ V   P E++     
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQ--------DVKV---PKENLLPNKS 238

Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  
Sbjct: 239 GLGAPLGCLDSARYGIAWGVIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMIT 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  A  L  RL    +E K+ S + + A       K     MA  +  +A + +GG G 
Sbjct: 299 EITKAQLLCLRLGQLKNEDKATSAQISMA-------KRNNVDMALKIARDARQILGGMGI 351

Query: 425 IEERSIARH 433
             E SI RH
Sbjct: 352 SGEYSIMRH 360


>gi|126731620|ref|ZP_01747425.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707786|gb|EBA06847.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 412

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D  ++ ++  K+ DG Y LSG K W  +SP++D FI+ A+ E   G++  
Sbjct: 154 FGLTEPDHGSDPGSMITRAVKV-DGGYRLSGAKNWISNSPIADVFIVWAKSEAHGGKIKG 212

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++     D   +GL   +++ K   R++ T  +     F     LL       GP    
Sbjct: 213 FVL-----DKGADGLAAPKIEGKFSLRASITGMIMMDEVFVPEENLLPHAEGLAGP---- 263

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +    +  AEA  +A R     R   G  L    ++++ +AD+  +I+
Sbjct: 264 --FGCLNRARYGIGWGAMGAAEACWHAARTYTMDRKQFGKPLAATQLIQKKLADMQTEIS 321

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + RL    D  ++ +E       +  + K   C  A A+  EA +  GG+G  +E
Sbjct: 322 LGLLAALRLGRMMDAHENSAE-------LISLVKRNNCGKALAIAREARDMHGGNGVSDE 374

Query: 428 RSIARH 433
             + +H
Sbjct: 375 YGVIQH 380


>gi|257469157|ref|ZP_05633251.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|317063404|ref|ZP_07927889.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|313689080|gb|EFS25915.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 51/329 (15%)

Query: 140 LYLMAQLEAGHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +Y MA  E   +   + V  ++  +L T P +H       F  E       P   +   +
Sbjct: 68  MYAMAVEELSRVCGTTGVIVSAHTSLGTWPILH-------FGTEEQKQKYIPKLASGEWL 120

Query: 199 G-LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSP-MSDAFIMLAQVEGRV 253
           G  GLTE   GTD A    Q   + D     + ++G K F+++   +D +++    +   
Sbjct: 121 GAFGLTEPNAGTDAAG--QQTTAVLDETTNEWIINGSKIFITNAGYADVYVIFGMTDRSK 178

Query: 254 GCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           G   +   +LE G+P G    + + K+G + ++T EL F N       LLG++       
Sbjct: 179 GLKGISAFILETGTP-GFSIGKKEKKLGIKGSSTCELIFENVRIPKSNLLGEVG------ 231

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKR 357
           +  KI      A+M++ G R+ +A            E + Y + R   G  +      + 
Sbjct: 232 KGFKI------AMMTLDGGRIGIASQALGIAQGALDETVGYVKERKQFGRAIAKFQNTQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ + I A+  L ++ A         + +AA A++ A        + A  V  +A++
Sbjct: 286 QLADLEVKIEASRLLVYKAAWKESNNLPYTVDAARAKLFA-------AETAMEVTTKAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY  E  + R  R++    I  G+
Sbjct: 339 LHGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|302560533|ref|ZP_07312875.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces
           griseoflavus Tu4000]
 gi|302478151|gb|EFL41244.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces
           griseoflavus Tu4000]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 49/276 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F V     D    G    R  +K+G +++ T EL F         D+ V   PV
Sbjct: 184 RHGISLFAV-----DTKSEGYSVGRKLDKLGLKTSDTAELAFV--------DVKV---PV 227

Query: 310 EDM-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354
           ED+     K   YL   + S       G       A+ +A++ +V    +  +PV     
Sbjct: 228 EDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQERTVFGKPVAHFQN 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            K  +A    ++ AA A++ R   + D  +    EAA A++       +C ++A  VI  
Sbjct: 287 TKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDR 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  IAR Y ++  N I  G+   M
Sbjct: 340 CLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|256043966|ref|ZP_05446882.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|260565142|ref|ZP_05835627.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260152785|gb|EEW87878.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A++ G     +  F
Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARMGGSGPSGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           L  R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 183 LAERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 237 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350

Query: 432 RHYRE 436
             YR+
Sbjct: 351 HFYRD 355


>gi|240141087|ref|YP_002965567.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens AM1]
 gi|240011064|gb|ACS42290.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens AM1]
          Length = 408

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 57/299 (19%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           D + +A + K++    +G   L+E   G+D+A + ++  +  D        +W   +  +
Sbjct: 115 DESRRALLAKSAKGQWIGSIALSEPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGA 174

Query: 241 DAFIMLAQV------EGR---VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
           D   +LA+V      E R   +  FLV  + E G+ P G+    + +KIG     T EL 
Sbjct: 175 DFIEVLARVRDPEPGEPRSAGLEPFLV--VKEPGTFPKGMTGTVI-DKIGYHGFLTFEL- 230

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340
                     +L+    P  D    +Y D    + SG   S+   ++ AR          
Sbjct: 231 ----------NLDGVRVPERDRLTGLYGDEGADADSGGFASVQRGLNIARVHTAARAVGV 280

Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                         R   G  +     ++ A+AD+A ++A A A   ++A+  DE     
Sbjct: 281 ARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAAEVAQARAYWQQVAHLLDEGLPAE 340

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+A  +++A        +MA  V  +AM+  GG+GY  ER + R++R++   +I  G+
Sbjct: 341 SESAQVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGT 392


>gi|209515151|ref|ZP_03264019.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504405|gb|EEA04393.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 393

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 114/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   +  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGN--DHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|195435822|ref|XP_002065878.1| GK20558 [Drosophila willistoni]
 gi|194161963|gb|EDW76864.1| GK20558 [Drosophila willistoni]
          Length = 423

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 40/292 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 143 TPEQKAKYLPKLCSGEH-------------IGGLAMSEPGAGSDVVSMKLRAERKGD-YY 188

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            L+G K W  +   +D  I+ A+          +  F+V    E     G    +  +K+
Sbjct: 189 VLNGTKFWITNGSDADTLIVYARTGPSDAPGHGITAFIVETAWE-----GFSVAQKLDKL 243

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334
           G R ++T EL F +       +LG  N   G    M  L Y  L  A   V  M+ +   
Sbjct: 244 GMRGSSTCELVFQDLKVPAKNILGQEN--KGVYVLMSGLDYERLVLAAGPVGLMQAACDV 301

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA +R     ++ +  +++  +AD+   ++A+ +  + +A S D     S++ A   
Sbjct: 302 AFDYAHQRKQKNKLIGEFQLLQGKMADMYTLLSASRSYLYAVARSCDNGVRSSKDCAGVI 361

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +       +C + A  +  +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 362 L-------YCAENATKLALDAIQILGGNGYINENPTGRLLRDAKLYEIGAGT 406


>gi|26248316|ref|NP_754356.1| putative acyl-coa dehydrogenase [Escherichia coli CFT073]
 gi|26108720|gb|AAN80923.1|AE016762_176 Putative acyl-coa dehydrogenase [Escherichia coli CFT073]
          Length = 342

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 24/266 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   IG + LTE   G+D+  + ++ Q+  DG       KW     ++D FI+L  
Sbjct: 74  PKLATGELIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGKKKWITLGQIADFFIVLIH 133

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
              ++   L+ R     + +G     L + +G R N   EL F++       LLG L   
Sbjct: 134 CGNQLATVLIDR-----NTDGFTITPLNDMLGLRGNMLAELHFNDCRLKEDALLGPLT-- 186

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
             P   + +   L+    + +   + L +     A  Y R+R      L    +++   A
Sbjct: 187 --PGVPLAVNFALNEGRFTTACGSLGLCQAAVDVATRYIRQRKQFKRRLFSHGIVQHLFA 244

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +     +A  + F  A    E +     A   +I+  + KY   K A  V  +A++ +G
Sbjct: 245 TMLTQTRSAQLMCFSAA----EYRETLHPAMINQIL--MAKYVASKAAVDVAGKAVQLLG 298

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +G   + ++ R+YR++    I+ G+
Sbjct: 299 ANGCHADYAVERYYRDAKIMEIIEGT 324


>gi|329939193|ref|ZP_08288567.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302078|gb|EGG45971.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 396

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 17/259 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E    +  P       IG  GLTE   G+D A + +  ++   G + L G K W  +
Sbjct: 119 FGSEEQKRHWLPRMAAGEVIGCFGLTEPDHGSDPAGMRTHARR-DGGDWVLDGRKMWITN 177

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++   ++ A+ E  +  FLVP     G+P G     +++K   R++ T EL   +   
Sbjct: 178 GSVAGVAVVWARTEDGIRGFLVP----AGTP-GFSAPEIRHKWSLRASVTSELVLDDVRL 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L   TG    +  L +    I+  ++   R     A+ YAR R   G  +    +
Sbjct: 233 PAEAVLPEVTGLRGPLSCLSHARYGIVWGAMGAARSCFESAVEYARTREQFGRPIGGFQL 292

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +   
Sbjct: 293 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI--- 349

Query: 415 AMECIGGSGYIEERSIARH 433
               +G +G   E  + RH
Sbjct: 350 ----LGANGISLEYPVMRH 364


>gi|325289277|ref|YP_004265458.1| Butyryl-CoA dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964678|gb|ADY55457.1| Butyryl-CoA dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
          Length = 384

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  A  +   +  D  Y L+G K F + +  +D F ++A  +   G   +  
Sbjct: 127 LTEPSAGSDAGACRTTAVRSGDD-YILNGRKCFCTNAAYADIFTVIASTDRSQGAKGLTA 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            L D    GL   + +NK+G RS+ T ++ F +              GF++    +  G 
Sbjct: 186 FLVDAGTPGLTIGKEENKMGARSSNTCDVVFEDVKVPAKNRIGEEGKGFIIAMKALGIGR 245

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                      +   ++   R +L  A+ YA +R   G  + +Q  ++  +AD+ + + A
Sbjct: 246 AS---------AGATAIGNARFALEYALDYATKRVTFGKPIAEQQGIQHLLADMYMRLEA 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A +L+       D     +   + A+     T         +V  +A++ +GG GY +E 
Sbjct: 297 ARSLTAYACQLVDNGIVDAAVNSSAKAFGSDT-------GMSVTTDAVQILGGYGYSKEY 349

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 350 PLEKRMRDAKIMQIWEGT 367


>gi|158298698|ref|XP_318878.3| AGAP009783-PA [Anopheles gambiae str. PEST]
 gi|157014010|gb|EAA14306.3| AGAP009783-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 49/315 (15%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+ L T  +  K + PK+ S+EY  +               L+E   G+D  ++ +  +K
Sbjct: 133 MIKLGTAEQKSK-YLPKL-SQEYSGS-------------FALSEPSAGSDAFSLKTTAKK 177

Query: 221 ISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             DG  Y L+G K W  +S +S  F+++A      G   +   + +    G    + ++K
Sbjct: 178 --DGNHYILNGTKMWISNSDLSGVFLIMANANPSAGYRGITTFIVEREYEGFTVGKKESK 235

Query: 279 IGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +G  ++ T  L   N         G        + G         +L+   + +    + 
Sbjct: 236 LGICASGTCTLHMDNVRVPEENILGEFGKGYQYAAG---------FLNEGRIGIGAQMIG 286

Query: 332 LAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+      I Y   R   G  L     M+  IA IA +I AA  L++  A        R
Sbjct: 287 LAQGCLDATIPYLLERKQFGSDLYSFQSMQHQIATIATEIEAARLLTYNAA--------R 338

Query: 387 SEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +EA    +  A + KY+  ++A     + ++ +GG G+ ++    + YR+    +I  G
Sbjct: 339 LQEAGAPFLKQAAMAKYYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEG 398

Query: 446 SGNAMVLDVLNLLEK 460
           + N  +  +  +++K
Sbjct: 399 TTNMQLSTIAKVMKK 413


>gi|163853663|ref|YP_001641706.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665268|gb|ABY32635.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 408

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 57/299 (19%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           D + +A + K++    +G   L+E   G+D+A + ++  +  D        +W   +  +
Sbjct: 115 DESRRALLAKSAKGQWIGSIALSEPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGA 174

Query: 241 DAFIMLAQV------EGR---VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
           D   +LA+V      E R   +  FLV  + E G+ P G+    + +KIG     T EL 
Sbjct: 175 DFIEVLARVRDPEPGEPRSAGLEPFLV--VKEPGTFPKGMTGTVI-DKIGYHGFLTFEL- 230

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340
                     +L+    P  D    +Y D    + SG   S+   ++ AR          
Sbjct: 231 ----------NLDGVRVPERDRLTGLYGDEGADADSGGFASVQRGLNIARVHTAARAVGV 280

Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                         R   G  +     ++ A+AD+A ++A A A   ++A+  DE     
Sbjct: 281 ARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAAEVAQARAYWQQVAHLLDEGLPAE 340

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+A  +++A        +MA  V  +AM+  GG+GY  ER + R++R++   +I  G+
Sbjct: 341 SESAQVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGT 392


>gi|157820807|ref|NP_001102366.1| glutaryl-CoA dehydrogenase, mitochondrial [Rattus norvegicus]
 gi|149037832|gb|EDL92192.1| glutaryl-Coenzyme A dehydrogenase (predicted) [Rattus norvegicus]
          Length = 447

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y LSG K W  +SP++D F++ A+ E      +
Sbjct: 186 FGLTEPNHGSDPGSMETRARHNPSNKSYTLSGTKTWITNSPVADLFVVWARCEDNC---I 242

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 243 RGFLLEKGM-RGLSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 297

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 298 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 355

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 356 LHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGISDEYH 408

Query: 430 IARH 433
           + RH
Sbjct: 409 VIRH 412


>gi|148260571|ref|YP_001234698.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146402252|gb|ABQ30779.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 599

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 116/291 (39%), Gaps = 36/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A IT+     +DG + L G K ++S    +       ++LA++ G     
Sbjct: 163 LSEPQAGSSLADITTTATPRADGTFSLRGSKMWISGGDQEISENIVHMVLARIAGAPAGT 222

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG-- 300
             +  FLVP+   D     G  N +    L +K+G R      L F     T G L+G  
Sbjct: 223 RGISLFLVPKRRVDESGAVGESNNIALAGLNHKMGQRGTTNCLLNFGESGETIGHLIGAP 282

Query: 301 --DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354
              L      + + +I +   + + +++G R S   A    + R          PV    
Sbjct: 283 HRGLEYMFQMMNEARIGVGHAATMSALAGYRHSADYARTRTQGRRAGQKDPSAPPVPIVE 342

Query: 355 ---MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              ++R +      +  A AL    A   D      +A  ++   A   ++ P+ K W  
Sbjct: 343 HADIRRMLLAQKAAVEGAQALCLYAAQLVDRQEIATDADEKAWLGALLGLLTPVVKSWPS 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +        AM+ +GG GY  +  + R YR++  N I  G+     +D++ 
Sbjct: 403 EHCLEANKWAMQILGGYGYTRDYPLERLYRDNRLNHIHEGTFGIQGIDLVG 453


>gi|300709610|ref|YP_003735424.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299123293|gb|ADJ13632.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 387

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 22/252 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM       G  LTE   G+D + + ++ ++  D  Y L G K W  +SP++D  ++ A+
Sbjct: 118 PMGTGQAIGGFALTEPDHGSDPSRMETRAERDGD-EYVLDGEKRWCTNSPIADVLVVWAR 176

Query: 249 ---VEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
               EG  V  FLV     +   +GL    +  K+  R++++ E          G +L D
Sbjct: 177 DTSSEGEPVRGFLV-----ETDRDGLDIDSIDGKLSLRASSSGEFTMDGVRIPEGNVLPD 231

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +    GP+  +    Y   A  +V   R    EA  YA  R   G  +    + +  +A+
Sbjct: 232 VEGMKGPLSCLTQARY-GIAWGAVGAARDCFEEARAYATDREQFGKPIGGFQLQQDKLAE 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  +  L+ RLA   +  + R +  + A       K    +MA      A E +GG
Sbjct: 291 MATRITTSQLLAHRLAELKERGEMRPQHVSMA-------KRNNVEMARDQARVAREMLGG 343

Query: 422 SGYIEERSIARH 433
           +G  +E S  RH
Sbjct: 344 NGITDEYSPIRH 355


>gi|296534321|ref|ZP_06896797.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296265350|gb|EFH11499.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 592

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 138/342 (40%), Gaps = 56/342 (16%)

Query: 154 PSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P +T  +A MV       +   + PK+ S E+             A  + LTE   GTD+
Sbjct: 128 PGLTRGAAEMVERFAPEPLKSTYLPKLVSGEW-------------AGAMALTEAHSGTDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------VEGRVGCFLVP 259
             + ++ +   DG   ++G K F++    +A      ++L +       V G +   LVP
Sbjct: 175 GLLRTRAEPQPDGTLRVTGGKIFITGGDHEAAENIVHLVLVRLPDAPPGVRG-ISLALVP 233

Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + L D     G  N L    L++K+G  ++ T  + +    G+L+G+ +     +  M  
Sbjct: 234 KYLPDAEGRPGPRNALSAGALEHKMGIHASPTCVMNYDGATGWLIGEPHRG---LAVMFT 290

Query: 315 LIYLDSAIMSVSGMRVSLAE---AIHYARRR------HVSGGILIDQPVM-----KRAIA 360
           ++  +   + + G+ ++ A    A  YAR R        + G    QP++     +R + 
Sbjct: 291 MMNTERLFVGLQGLGIAEAAYQGAARYARDRLQGRAPLSAAGAEGPQPILGHPDVRRMLL 350

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAPITKYWCCKMAPAVIAE 414
            I     AA AL+   A   D+A    + A  A       ++ P+ K     +       
Sbjct: 351 TIRGFTGAARALALWTALEMDKAALHPDPAERAASEGLIALLTPVIKASFTDLGFEATVL 410

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A +  GG GY+ E  + +  R++    I  G+     +D++ 
Sbjct: 411 AQQVFGGHGYVREWGMEQLVRDARIAQIYEGTNGVQAMDLVT 452


>gi|256784066|ref|ZP_05522497.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289767947|ref|ZP_06527325.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289698146|gb|EFD65575.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 401

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 39/277 (14%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI--MLAQVEGR---------VGC 255
           G+D++AI+S+   + DG  Y L+G K +L++  + + +  ++   EG          +  
Sbjct: 135 GSDVSAISSKA--VRDGEEYVLNGQKMWLTNGGTSSLVAVLVKSDEGHPEGTAPHKSMTT 192

Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           FLV +    G    GL      +K+G +   T EL        L    N   G V     
Sbjct: 193 FLVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELVMDG----LRIPANRVLGGVTGRGF 248

Query: 315 LIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +D      ++V+     +A+      + YA++RH  G  +     ++  +A++A  +
Sbjct: 249 YQMMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRHTFGKQIAQHQAIQFKLAEMATKV 308

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +
Sbjct: 309 EAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSK 361

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 362 EYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|229110540|ref|ZP_04240110.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock1-15]
 gi|228673024|gb|EEL28298.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock1-15]
          Length = 382

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|32967985|gb|AAP92500.1| 2,3-diaminopropionate alpha,beta-desaturase [Streptomyces vinaceus]
          Length = 390

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 41/275 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           L  TE  GG+D+AA+ +   + +DG+  L+G K FL++  ++D  ++L        C L+
Sbjct: 123 LAATEPGGGSDLAAVRTTAVRDADGLR-LNGDKAFLTNGSVADFAVVL--------CHLL 173

Query: 259 PRLLEDGS--PNGLC---------------YQRLKNKIGNRSNATVELEFSNTF---GFL 298
           P   ++G   P+GL                 +R   K+GNR+     L F++       L
Sbjct: 174 PSGADEGGNPPDGLDSLTLVLVPTGLPGVRQERHTGKLGNRACDHGRLSFTDVRVPEENL 233

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMK 356
           LG     +G     ++     + + +V   R +  L  A  YAR R V G  L+    + 
Sbjct: 234 LG--KPGSGYEALTRVFTRERTFLAAVCTARAATMLDRATTYARGRAVLGRPLLQHQAIA 291

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  ++A        +    D    R +E A A   A I K    ++        +
Sbjct: 292 FRLAELDAELAL-------IEQYTDAVFQRLQEDAAALRQASIAKLRASRLERECADLLL 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +  GG+GY+E   + R YR++ A ++  G+  A++
Sbjct: 345 QLHGGAGYLEGGPVERGYRDARAYALAGGADEALL 379


>gi|300691454|ref|YP_003752449.1| acyl-coA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299078514|emb|CBJ51169.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 625

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 169/409 (41%), Gaps = 86/409 (21%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L   DGS    N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGVKGISLFIVPKFLVGADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                     +   G+L+G+    L      + + +I + + + ++  +G       A+ 
Sbjct: 284 RPKGPDGQPRAGAIGYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGY----LHALD 339

Query: 338 YARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-- 382
           YAR R     +             ++D   ++R +      +  A  L+   A   DE  
Sbjct: 340 YARNRPQGRPVGPAGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEER 399

Query: 383 -AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A S  + AA AR      I+ PI K W  +      + A++  GG GY  E ++ + YR
Sbjct: 400 GAASEGDAAARARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYR 459

Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRD 489
           ++  N I  G+     LD+L    +++ G   F  L   ++  +G    SG + +     
Sbjct: 460 DNRLNPIHEGTHGIQGLDLLGRKVVMQDGA-AFAALGQRVQATVGRALDSGDEALAGWGR 518

Query: 490 SISLCKEDKGLARFLTE-------KIALASSAAALYRAGMNDIADVFLE 531
           ++ +  +  GLA+   +       ++ LA+++  L   G   IA ++LE
Sbjct: 519 ALGMAAQ--GLAKVTQQLWAAGDPRVTLANASVYLEAFGHVVIAWIWLE 565


>gi|312198857|ref|YP_004018918.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230193|gb|ADP83048.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 22/276 (7%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W P I + E   T             L   E+ G  D++ IT+   +  DG + L+G
Sbjct: 111 QKAWLPGIAAGETIAT-------------LAFAEENGRWDVSGITAVAARSGDG-WTLTG 156

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K + L    +D  ++ A+    V  F VP     G   GL    L      R  A VEL
Sbjct: 157 TKSYVLDGHTADLLLVAARGAAGVSLFAVP-----GDAPGLTRLPLATLDQTRRLARVEL 211

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
             +     L+G+       +E +  L  +  A     G  V+L  A+ YA+ R   G  +
Sbjct: 212 --AGVPATLVGEDGAGWPVIEHVLNLAAVALAAEQAGGAEVALDMAVQYAKDRVQFGRQI 269

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +K   AD+ L++ +A + ++  A       +  E A     +A + K +C +   
Sbjct: 270 GSFQAVKHRCADMLLEVESARSAAYYAAWCAAGTTAGDESADELAKIAAVAKAYCSEAYT 329

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            V A+ ++  GG G+  E S   ++R + ++ +L G
Sbjct: 330 QVAADNIQVHGGIGFTWEHSAHLYFRRAKSDELLFG 365


>gi|296138171|ref|YP_003645414.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026305|gb|ADG77075.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 610

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 53/292 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEG---- 251
           LTE   G+D+ A  ++  K  DG + + G K F++S   D        ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAIKQEDGSWHIEGVKRFITSATVDDMFESTFHLVLARPEGGAPG 223

Query: 252 --RVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300
              +G + VP+    EDG+    NG     +++K+G +++ T EL F        G+L+G
Sbjct: 224 TKGLGLYFVPKYHFDEDGNLGEHNGAFVTNVEHKMGIKTSTTCELTFGGHGIPAKGWLVG 283

Query: 301 DLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------- 351
           +     G  +  K++ +  +     ++  +      A+ YA++R V G  L         
Sbjct: 284 E--EIKGIAQMFKVIEHARMMVGTKAIGTLSTGYLNALDYAKQR-VQGADLTQMADKTAP 340

Query: 352 ------QPVMKRAIADI--------ALDIAAATALSFRLANSFDEAKSRSEEAAYA--RI 395
                  P ++R++           A+ +  A     R A     A    EE AY    +
Sbjct: 341 RVTITHHPDVRRSLLTQKAYAEGLRAVYLYTAAHQDVRTATPVSGA---DEEMAYKVNDL 397

Query: 396 MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + PI K    + A  ++  E+++  GGSG++++  I ++ R+S  +S+  G+
Sbjct: 398 LLPIVKGVGSERAFTLLGTESLQTFGGSGFLQDYPIEQYVRDSKIDSLYEGT 449


>gi|153005734|ref|YP_001380059.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029307|gb|ABS27075.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 592

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 40/287 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     +      DG  Y L G K F+++   +D F + A+V+ +    FLV
Sbjct: 147 LTEPEAGSDALGGKASATLSPDGRHYLLEGTKQFITNGSFADLFTVFARVDRKHFTAFLV 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R     +  GL     + K+G + ++T  + F         +LG+  +  G      +L
Sbjct: 207 ER-----TTPGLTVGPEEKKLGIKGSSTTSVIFEGAQVPVENVLGE--IGKGHKIAFNVL 259

Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +A+   +  +++L     YA  R   G  +     ++  +AD+   + AA +
Sbjct: 260 NVGRFKLGAAVTGAA--KLALGTGAAYANARKQFGVPIARFGAIQEKVADLTAALFAAES 317

Query: 372 LSFRLANSFD--------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           L +RLA   D              EA  +  E  YA I   + K +C ++   V+ E ++
Sbjct: 318 LVYRLAGLIDDRLATIPKDTPGYYEAYQQGIEE-YA-IECAVAKVFCSEVLADVVDEVVQ 375

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             GG G+I+E    ++YR+   N I  G+      ++  LL  GT L
Sbjct: 376 IHGGYGFIQEYPAEKYYRDERINRIFEGTN-----EINRLLVPGTIL 417


>gi|119715692|ref|YP_922657.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536353|gb|ABL80970.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 398

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 33/260 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EG------RVGCFLVP 259
           G+D++A+ ++  K +DG Y + G K W  +   S+   +LA+  EG       +  FLV 
Sbjct: 135 GSDVSAVKTKATK-TDGGYTIDGQKMWLTNGGTSNLVAVLARTDEGADSVYKNMTTFLVE 193

Query: 260 RLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDM-KI 314
           +  E G   +  GL      +K+G +   T E  F    G  + D  V  G P +   ++
Sbjct: 194 K--EPGFGETAPGLTIPGKLDKMGYKGVETTEAVFE---GHQVSDDQVLGGAPGQGFYQM 248

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  ++   ++V+   V +A      AI YA++R   G  +     +   +A++A  +  A
Sbjct: 249 MDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAEMATKVETA 308

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+  + A   D  +    EA  A+++A     +C +    V+ ++    GG GY +E  
Sbjct: 309 HAMMVKAARLKDRGERNDVEAGMAKMVAA---EYCNE----VVQDSFRIHGGYGYSKEYE 361

Query: 430 IARHYRESPANSILLGSGNA 449
           I R YRE  A  +L+G G +
Sbjct: 362 IERLYRE--AAFMLIGEGTS 379


>gi|145536399|ref|XP_001453927.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421660|emb|CAK86530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 26/268 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D   + +  +K  +  Y ++G K F+S   +SD ++++ +  E  V C LV 
Sbjct: 146 LTEPNSGSDSKNMKTFAKKDGND-YVINGSKCFISGGSVSDVYLVMCKTSEKDVSCILV- 203

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
              E G+P GL + +L++K+G  ++ T  + F       SN  G       ++   ++  
Sbjct: 204 ---EKGTP-GLSFGKLEDKMGWNASPTAMVLFDNVRVPQSNLLGKEGNGFKMAMSALDGG 259

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  S+ G   +      Y   R   G  L     ++   AD+A ++  +  +
Sbjct: 260 RINI----ASCSLGGASFAFDLTKDYLHDRKQFGQPLAAFQGLQFKFADMATNLVTSRLI 315

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D   S  ++  Y+ +        C  +A     EA++  GG GY+ E  + R
Sbjct: 316 VRQAAQMIDN--SHPDKTLYSAMAKRYATDSCFNLAN----EALQLHGGYGYLREYQVER 369

Query: 433 HYRESPANSILLGSGNAM-VLDVLNLLE 459
             R+   + IL G+   M V+   NLL+
Sbjct: 370 IVRDLRVHQILEGTNEIMKVIISRNLLK 397


>gi|118619023|ref|YP_907355.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium ulcerans Agy99]
 gi|118571133|gb|ABL05884.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium ulcerans Agy99]
          Length = 388

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 47/262 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
           G GLTE   G+D A  T    ++  G + ++G K F+++  +D  + + +  V G     
Sbjct: 127 GFGLTEPGAGSD-AGSTRTTARLDGGEWVVNGSKQFITNSGTDITSLVTITAVTGSIADG 185

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +   +VP     G+P G   + + NK+G  ++ T  L F         D  V   P 
Sbjct: 186 KKEISTIIVP----SGTP-GFIVEPVYNKVGWNASDTHPLSFD--------DARV---PE 229

Query: 310 EDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           E++           L  LD   ++++ +   +A     E++ YA+ R   G     QP+ 
Sbjct: 230 ENLLGIRGKGYANFLSILDEGRIAIAALATGVAQGCVDESVKYAKERQSFG-----QPI- 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             +   I+  IA   A +     ++ EA ++       +  A I K    + A     +A
Sbjct: 284 -GSYQAISFKIARMEARAHVARTAYYEAAAKMLAGKPFKKEAAIAKMISSEAAMDNARDA 342

Query: 416 MECIGGSGYIEERSIARHYRES 437
            +  GG G++ E  +ARHYR+S
Sbjct: 343 AQVHGGYGFMNEYPVARHYRDS 364


>gi|332209942|ref|XP_003254069.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Nomascus leucogenys]
          Length = 430

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 21/271 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           P       IG L +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 159 PQMTAGKCIGALAMTEPGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGSLSDVVIVV 216

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E       +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 217 AVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGE 276

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            N   G    MK L    L  A +++S       E  +Y ++R   G  +     ++  +
Sbjct: 277 EN--KGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKL 334

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I    A    + N     +++  ++A     A + KYW  ++  +V  + ++  
Sbjct: 335 AELKTHICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYDCVQLH 387

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 388 GGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|281363737|ref|NP_611409.2| CG7461 [Drosophila melanogaster]
 gi|272432560|gb|AAF57579.2| CG7461 [Drosophila melanogaster]
          Length = 627

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 267

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 268 PPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 324

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 325 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG GY+ +  + R  R+     I  G
Sbjct: 384 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGYMVDNGLERVLRDLRIFRIFEG 436

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 437 TNDILRL 443


>gi|154309163|ref|XP_001553916.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852519|gb|EDN27711.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 443

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 25/282 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T+      L+E   G+D  A+ ++  K   G Y +SG K W  +S  ++ FI+ A 
Sbjct: 172 PKLATNTVGSFCLSEPVSGSDAFALATKATKTDSG-YTISGSKMWITNSMEAEFFIVFAN 230

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
           ++   G   +   + +    G    + + K+G ++++T  L F +       LLG+    
Sbjct: 231 LDHSKGYKGISAFVVEKGMKGFSIAKKEKKLGIKASSTCVLNFDDVEIPRENLLGEEG-- 288

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRA 358
               +  K  I  L+   + ++     LA      A  Y    R   G ++ D   M+  
Sbjct: 289 ----QGYKYAIALLNEGRIGIAAQMTGLALGAFENATKYVWNDRKQFGQLVGDFQGMQHQ 344

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA    +IAAA AL +  A   +  ++  ++AA A++ A        ++A  V   A   
Sbjct: 345 IAQSYTEIAAARALVYNAARKKEAGENFVQDAAMAKLFA-------SQVAQRVSGLAGSW 397

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G++ E    + +R+    SI  G+ N  +  +  LL++
Sbjct: 398 MGGMGFVREGIAEKMWRDWMIGSIYEGTSNIQLTTIAKLLKQ 439


>gi|329937921|ref|ZP_08287403.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302878|gb|EGG46767.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           + +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTAAPTAEDR 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312
            F +     D    G    R  +K+G +++ T EL F         D+ V T  +  E+ 
Sbjct: 184 RFGISLFAVDTKSEGYSVGRKLDKLGLKTSDTAELAFV--------DVKVPTEDLLGEEN 235

Query: 313 KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K   YL +         A  + +  + ++  A  Y + R V G  +      K  +A   
Sbjct: 236 KGFHYLGANLPSERWGIAFGAYAQAKAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQ 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA A++ R   + D  +  + EAA A++       +C ++A  VI   ++  GG G
Sbjct: 296 AEVDAAEAVADRALEALDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQLHGGYG 348

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  IAR Y ++  N I  G+   M
Sbjct: 349 YMNEYPIARLYADNRVNRIYGGTSEIM 375


>gi|307327115|ref|ZP_07606304.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887196|gb|EFN18193.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 387

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           L LTE  GG+D+ A+ +  +K +DG Y + G K W  +S  S    +L + +        
Sbjct: 124 LALTEPGGGSDLQAMRTVARKDADG-YVVDGSKTWITNSRRSQLIALLCKTDPDATPAHQ 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVE 310
           G  ++  L+E G   GL   R   K+G +   + EL F         +LG +    G  +
Sbjct: 183 GISIL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFDGYRAPADAVLGGVE-GKGFAQ 237

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    L  A  ++   R +L +A+ YA+ R   G  +     +   +AD+A  + A
Sbjct: 238 MMKGLETGRLQVASRALGVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTA 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+   A + D  +    EA  A++ A  T       A  +   A+   GG GY  E 
Sbjct: 298 ARQLTLYAARAADAGRRVDMEAGMAKLFASET-------AMEIALNAVRIHGGYGYSTEF 350

Query: 429 SIARHYRESPANSILLGSGN 448
            + R++R++P   +++G G 
Sbjct: 351 DVERYFRDAPL--MIVGEGT 368


>gi|265992519|ref|ZP_06105076.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|265998986|ref|ZP_05464560.2| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|262763389|gb|EEZ09421.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|263091706|gb|EEZ16049.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D  A+ +  ++  D  Y ++G K F++ +P++  F ++A+  G     +  F
Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           L  R L      GL      +K+G R   T ++   N       ++G +    G    MK
Sbjct: 184 LAERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237

Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L      I SV        + E++ +A  R   G  + +  +++  +AD++ +  A   
Sbjct: 238 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A +FDE+       A +       K +C +M   V   A++  GGSGY++   + 
Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351

Query: 432 RHYRE 436
             YR+
Sbjct: 352 HFYRD 356


>gi|218780497|ref|YP_002431815.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761881|gb|ACL04347.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 391

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 29/272 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG--- 254
           + +TE   G+D++A+ S  +K  DG  Y L+G K F+++   +D + +LA+     G   
Sbjct: 135 IAVTEPAAGSDVSALQSTAKK--DGSSYVLNGSKMFITNGTQADFYTLLARTSDEPGYHA 192

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
              F+VP  L      G+   R   KIG   + T EL F +       L+G      G +
Sbjct: 193 FSLFVVPADLP-----GVHVSRKLEKIGVWCSDTAELFFDDVRIPAENLIG--QEGEGFI 245

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+   +   +++    +  R  +   + Y R R V G  LI +  ++  + D   ++ 
Sbjct: 246 YQMRQFQHERFSLLPPIYTAAREIIDMTVDYLRERVVFGKPLIKRQALQHQLVDWITEVE 305

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               LS+ +          S+E +       + K +  ++  +++A  +   GG G+++E
Sbjct: 306 CLKQLSYEIVRIKMAGLDASKEIS-------MGKLYAGRIFNSMVAGCLRMHGGMGFMKE 358

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             I+R+YR+S    I  G  + ++ DV+  LE
Sbjct: 359 MPISRYYRDSIGLGI-GGGADEVMKDVIAKLE 389


>gi|153007873|ref|YP_001369088.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559761|gb|ABS13259.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 592

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 128/297 (43%), Gaps = 42/297 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247
           + LTE   G+D+  + ++ ++  DG Y + G K F++     ++D  + L         A
Sbjct: 160 MNLTEPHAGSDLGVMRTRAERAGDGSYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219

Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295
             +G +  FLVP+ L  +DGS    N L    L++K+G  ++ T  + + + F       
Sbjct: 220 GTKG-ISLFLVPKFLVNDDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     I     
Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRAIGADPK 338

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAP 398
                +I+ P ++R +  +      A ++++  A++ D     E   +   +  A ++ P
Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYSCAHAIDMSHATEGADQQFWSDRAGLLTP 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +       V +  ++  GG G+IEE   A+  R++    I  G+     +D++
Sbjct: 399 LAKSFATDAGVDVASLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455


>gi|12859751|dbj|BAB31764.1| unnamed protein product [Mus musculus]
          Length = 451

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 41/278 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G     C
Sbjct: 156 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISC 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLN 303
            +V    E G+P GL + + + K+G  S  T  + F +              GFL+    
Sbjct: 214 IVV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKG 268

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G +         + A  S+     S+     + + R   G  L     ++  +AD+A
Sbjct: 269 LNGGRI---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMA 319

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+  L  R A     A +  EE   A  +  + K +  +   A+  +A++  GG G
Sbjct: 320 TKLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYG 373

Query: 424 YIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460
           Y+++ ++ ++ R+S  + IL GS   M +L   NLL++
Sbjct: 374 YLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQR 411


>gi|315925437|ref|ZP_07921648.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621338|gb|EFV01308.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFL 257
           LTE   G+D AA  ++ + + DG  Y ++G K F+S+      D  I++A  +       
Sbjct: 123 LTEPGAGSDAAA--AKTKAVPDGDDYVINGTKCFISNMGKDEGDYVILIALTDPEKKTRG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
           +  ++ D    G    + ++K+G R+    EL F +       LLG+     G       
Sbjct: 181 MSAIIVDRGTPGFSVGKAEDKMGLRAAPVSELIFEDCRVPKTQLLGEAGKGFGLA----- 235

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   V LAE     A+ YA  R   G  +     ++  +AD+A    AA
Sbjct: 236 MAGLDGGRIGMAAQAVGLAEGALTAAVQYAGERVQFGKPISANQGIQWYLADMATRTEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+   A   +     S+EAA A       KY+  + A  V  +A++  GG GY+++ +
Sbjct: 296 KLLTLNAAKLREAGLPVSKEAAMA-------KYYASEAAVYVADKALQIHGGYGYMKDYA 348

Query: 430 IARHYRES 437
           I R YR++
Sbjct: 349 IERVYRDA 356


>gi|159128355|gb|EDP53470.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 441

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 20/179 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K  DG  Y ++G  KW  +   SD   M  +  G     +
Sbjct: 160 IAITEPEAGSDVANITTTATKTPDGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGAAGL 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              LVP     G P G+  +RLK   G  +  T  +E  +     +G+L    G  + M+
Sbjct: 220 SVILVPL---KGYP-GVTMRRLKVS-GQITGGTTYIELDDV-KVPVGNLIGREG--DGMR 271

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           I++       L  A+      RV+LA A  Y  +R   G  L+DQPV++  +A    ++
Sbjct: 272 IIMTNFNHERLTIAVGVTRQARVALAAAFEYTMKREAFGKTLMDQPVVRHRLAKAGAEL 330


>gi|288962491|ref|YP_003452786.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288914757|dbj|BAI76242.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 392

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D   + ++  K+ DG Y LSG K W  +SP++D  ++ A
Sbjct: 123 PRLATGELVGCFGLTEPDHGSDPGGMKTRATKV-DGGYLLSGSKMWITNSPIADLAVVWA 181

Query: 248 QVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           + E    ++  F+V R        G    +++ K+  R++ T E+     F     LL +
Sbjct: 182 KSEAHDNKIKGFVVER-----GTKGFSTPKIEGKLSLRASVTGEIVLDEAFVPDENLLPN 236

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
           +    GP         L+ A   ++   +  AE     A  Y   R   G  L    +++
Sbjct: 237 VTGLGGP------FGCLNKARYGIAWGVLGAAEFCWHAARQYTLDRKQFGRPLAQTQLVQ 290

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I      + R+    D+  S S EA        + K   C  A  +   A 
Sbjct: 291 KKLADMMTEITLGLQAALRVGRMMDDG-SWSPEA------ISLIKRNNCGKALDIARVAR 343

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G  EE  + RH
Sbjct: 344 DMHGGNGISEEFQVIRH 360


>gi|119180400|ref|XP_001241675.1| hypothetical protein CIMG_08838 [Coccidioides immitis RS]
          Length = 547

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 271 ICLAITEPDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMN 330

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +    G+  +R+  + G  S+ T  + F         D+ V   PVE++    
Sbjct: 331 GVSVLLIEREFEGVSTRRMDCQ-GVWSSGTTYITFE--------DVKV---PVENLIGKE 378

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I S+   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 379 NRGFKVIMTNFNHERIGIVIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 438

Query: 363 ALDIAAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAM 416
           A  I A+      + ++  N  D   S     A A + A  T    +C + A  +     
Sbjct: 439 ARQIEASHNWLENIIYQCQNYEDMEASLRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 498

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      I R YR+  A +I  GS   M+
Sbjct: 499 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 529


>gi|62510481|sp|Q60HI0|ACADL_MACFA RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|52782177|dbj|BAD51935.1| acyl-Coenzyme A dehydrogenase, long chain [Macaca fascicularis]
 gi|90085619|dbj|BAE91550.1| unnamed protein product [Macaca fascicularis]
          Length = 430

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 31/276 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 159 PQMTAGKCIGAIAMTELGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGWLSDVVIVV 216

Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296
           A            +  FLV    E+G   G    R  +K+G ++  T EL F +      
Sbjct: 217 AVTNHEAPSPARGISLFLV----ENGM-KGFIKGRKLHKMGLKAQDTAELFFEDVRLPAS 271

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            LLG+ N   G    MK L    L  A M+VS       E  +Y ++R   G  +     
Sbjct: 272 ALLGEEN--KGFYYIMKELPQERLLIADMAVSASEFMFEETRNYVKQRKAFGKTVAHLQT 329

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++   I    A    + N     +++  ++A     A + KYW  ++  +V  +
Sbjct: 330 VQHKLAELKTHICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYD 382

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 383 CVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|319763631|ref|YP_004127568.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824104|ref|YP_004387407.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118192|gb|ADV00681.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309476|gb|AEB83891.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 25/272 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFI-MLA 247
           P  +  +   + ++E   G+D +   ++ ++ ++G + +SG K W   +   D  I ML 
Sbjct: 113 PFIEGKIRFSVSISEPDAGSDASNTKTRARRDANGDWIVSGQKLWCSGAAAQDVVIAMLV 172

Query: 248 QVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + +     G +   L+P    + +P GL   +L   +   +  T E+   N       +L
Sbjct: 173 RTDPDNKHGGLSVLLIP----NDTP-GLVINKLPT-LSRHATGTTEIFLDNVRVPGDAIL 226

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       + +   L     A       + +++ A+ YA  R   G  L D  V+K  +
Sbjct: 227 GEEGQGWKIITEHLELERCSVAAAYTGNAQEAVSNAVRYAHDRVQFGKQLWDFQVLKHML 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD   ++ AA  L +R A    E K  S E + A++ A  T   C           M+ +
Sbjct: 287 ADRQTEVDAARLLCYRAAQMASEHKPCSREVSMAKLYASETLKQCA-------LTGMQVL 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG   + E  + R+ RES   +I  G G + +
Sbjct: 340 GGYANLPEADMERYLRESIQCTI--GGGTSQI 369


>gi|295394632|ref|ZP_06804851.1| Isovaleryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972525|gb|EFG48381.1| Isovaleryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 397

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 29/272 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D+AAI +  ++  D  + ++G K F++ +  +D   ML +     G   +
Sbjct: 139 IGVTEPDAGSDVAAIRTTAKRDGDH-WVINGQKTFITNASHADWVCMLVRTSDEPGYRGM 197

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
            +++     +G    R+ +K+GNR + T EL  +       NT G          G    
Sbjct: 198 SQIIVPTDTSGFEVTRVLDKLGNRCSDTCELRLTDVRVPVANTIG--------QEGRGFQ 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAI----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++L +L   +   + M  S   A+     Y R R V G  L         I ++  +I 
Sbjct: 250 QQMLQFLIERLSGTASMIGSCDRALERTREYMRTRKVFGRSLAQCQYPAFRITELQAEIE 309

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                   L  S   A  R E       +    K    +++  V    ++  GG GY+EE
Sbjct: 310 I-------LRESLHGAVQRVERGEDVTRLTSAAKLKAGRLSREVADYVVQVHGGMGYMEE 362

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              AR  R+S   SI  G  + ++L VL  L+
Sbjct: 363 NWTARFMRDSRLTSI-GGGADEVMLQVLAKLD 393


>gi|91978273|ref|YP_570932.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684729|gb|ABE41031.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 15/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ ++ +   K+    Y ++G K F+++   +D  I++A+  G     L 
Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLEGDTYVINGQKTFITNGQNADLIIVVARTGGPGAKGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315
              LE     G    R  +KIG  ++ T EL F N       +LG      G V+ M+ L
Sbjct: 185 LIALETEDNPGFKRGRNLDKIGLHASDTSELFFENATAPKENVLGG-EEGKGFVQLMQQL 243

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A+ +V+ M  ++     Y R R   G     QP+++    + A  +A     +
Sbjct: 244 PQERLIIAVGAVAAMERAVKLTTDYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F      D    R        + A + K+W  +     + + ++  GG GY++E  I R 
Sbjct: 297 FIGRVFVDFCIERLIAGDLDAVTASMAKWWTTQKQVETVDDCLQLHGGYGYMQEYPIGRM 356

Query: 434 YRESPANSILLGSGNAMVL 452
           + +S    I  G+   M L
Sbjct: 357 FVDSRIQKIYGGTNEVMKL 375


>gi|296268514|ref|YP_003651146.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091301|gb|ADG87253.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 23/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  I +    I DG  Y L+G K F+++ + +D  I++A+ +   G   
Sbjct: 124 IAMTEPGAGSDLQGIRTTA--IRDGDHYVLNGQKTFITNGINADLVIVVAKTDPSAGARG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---MKI 314
           +  L+ +    G    R   KIG  +  T EL F N    +   L    GP E    +++
Sbjct: 182 ITLLVVERGMEGFTRGRNLEKIGLHAQDTAELFFDNVRVPVANRL----GPEEGQGFIQL 237

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  L    +S++   V+ +E      I Y R R   G  +      +  +A++A ++  A
Sbjct: 238 MQNLPQERLSIAVAAVAASERVLEMTIEYCRNRKAFGRSIGSFQNTRFVLAELATEVEIA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +   + +  +  + +AA A       K+W   +   VI   ++  GG GY+ E  
Sbjct: 298 RHYVDKCIRALNAGELTAVDAAKA-------KWWTTDLQNKVIDRCLQLHGGYGYMLEYP 350

Query: 430 IARHYRESPANSILLGSGNAM 450
           +A+ + +    SI  G+   M
Sbjct: 351 VAKAWLDGRVQSIYGGTNEIM 371


>gi|157107359|ref|XP_001649744.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108879621|gb|EAT43846.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 630

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 49/379 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE------- 250
             LTE   G+D  +I  +  K  DG  Y L+G K W  +  ++D   + AQ E       
Sbjct: 190 FALTEPSSGSDAGSIRCRAVKTPDGKHYVLNGSKIWISNGGIADIMTVFAQTEIEDPRTG 249

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
               +V  F+V R        G+     +NK+G + + T E+ F +     +   NV  G
Sbjct: 250 QKKDKVTAFIVERGF-----GGVTSGPPENKMGIKCSNTAEVYFEDC---KIPIENVLGG 301

Query: 308 PVEDMKILIYLDS-----AIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                K+ + + +        ++SG MR  + +A  +A  R   G  L     ++  +A 
Sbjct: 302 EGNGFKVAMNILNNGRFGMAATLSGTMRACIQKATEHATNRVQFGRKLETYGGIQEKLAR 361

Query: 362 IALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +A+   A  ++++ ++ + D   +    EAA +++ A  + ++ C        EA++ +G
Sbjct: 362 MAMHHYATQSMAYMISGNMDSGSTDYHLEAAISKVFASESAWYVCD-------EAIQILG 414

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV--LNLLEKGTNL--FEQLFSTLEQDL 476
           G G++++  + R  R+     I  G+ + + L V    +   G++L   ++ F     +L
Sbjct: 415 GMGFMKDAGLERVMRDLRIFRIFEGTNDILRLFVALTGIQYAGSHLKELQKAFKNPAANL 474

Query: 477 GSSGKKVITILRDSISLCKED---------KGLARFLTEKIALASSA--AALYRAGMNDI 525
           G   K+       SI     D         K  A+  +E I +   A  + L + G   +
Sbjct: 475 GLIFKEGSRRAIRSIGYGGTDLAPFVAGPLKDSAKQCSESIDIFGQAVESLLIKHGKGIV 534

Query: 526 ADVFLENRFLDNCHSTHCM 544
            + F+ NR  D    T+ M
Sbjct: 535 EEQFMLNRLADAAIDTYAM 553


>gi|290963226|ref|YP_003494408.1| acyl CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260652752|emb|CBG75885.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Streptomyces scabiei 87.22]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 26/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
           + +TE  GG+D+AA+ +   +   G + ++G K F+++      +++A   G       +
Sbjct: 125 IAMTEPSGGSDLAALKTTAVR-DGGDWLINGSKTFITNGHQADLVIVAARTGPGERAKGI 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V    E G+P G    R  +K+G     T EL F++        LG+  V  G V 
Sbjct: 184 SLFVV----EAGTP-GFERGRKLDKVGQEEADTAELFFTDVRLPDSHRLGE--VGEGFVS 236

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M++L    L +A+ ++  +   L E I YA+ R   G  +      K  IA++   +  
Sbjct: 237 MMRLLPQERLSTAVTNIGHVTRLLHETIAYAKERRAFGETIGSFQYNKFRIAELVTRVEV 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A         D+            + A   K+W  +   AV+ E ++  GG GY+ E 
Sbjct: 297 TQAY-------VDQCILAHTRGKLTPVDAAKAKWWAAETQNAVLDECVQLHGGYGYMNEY 349

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR +R++    I  GS   M
Sbjct: 350 RIARAWRDARVTKIWAGSNEIM 371


>gi|182438549|ref|YP_001826268.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178467065|dbj|BAG21585.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 392

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 54/318 (16%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG--QK 220
           L  T    + W PK+ + E              A+G  GLTE  GG+D     +     +
Sbjct: 106 LFGTEEQKRQWLPKLCAGE--------------ALGAFGLTEPDGGSDAGGTRTTAVLDE 151

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +D  + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 152 ATD-EWVINGSKCFITNSGTDITELVTVTAVTGRKEDGRPRISAIIVP----SGTP-GFT 205

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F++       LLG+           + L  LD   +++S +
Sbjct: 206 VAAPYSKVGWNASDTRELSFTDVRVPASNLLGEEGRGYA-----QFLRILDEGRIAISAL 260

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA  RH  G  +     ++  IAD+ +    A          + +A
Sbjct: 261 ATGLAQGCVDESVKYAAERHAFGRPIGTNQAIQFKIADMEMRAHMARV-------GWRDA 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A I K +   +A     EA +  GG G++ E  +AR +R+S    + 
Sbjct: 314 ASRLVAGEPFKKEAAIAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILE 371

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 372 IGEGTSEVQRMLIARELG 389


>gi|206974680|ref|ZP_03235596.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus H3081.97]
 gi|217960515|ref|YP_002339077.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH187]
 gi|229139713|ref|ZP_04268283.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST26]
 gi|206747323|gb|EDZ58714.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus H3081.97]
 gi|217063771|gb|ACJ78021.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH187]
 gi|228643844|gb|EEL00106.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST26]
          Length = 382

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 110/238 (46%), Gaps = 27/238 (11%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI--LIY 317
              +  G+  +   + +  R  A+ +L   N      FL    +V  G V+   I  L++
Sbjct: 189 ---NTIGVSIEETWDSVAMRGTASHDLVLQNVEIESRFLT---DVKGGKVKQKGIGWLLH 242

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +  + ++    + A     + + +     +   P ++R + ++ L++  A    +++A
Sbjct: 243 IPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIA 302

Query: 378 NSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 303 KKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|144898566|emb|CAM75430.1| Butyryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 379

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 28/261 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGC 255
           LTE   G+D A++ ++ ++  DG  Y L+G K F+S    SD ++++ +  G     + C
Sbjct: 124 LTEPGAGSDAASLRTKAER--DGEYYVLNGSKAFISGGASSDVYVVMVRTGGPGPKGISC 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +V    E G+P GL + + + K+G +S  T  + F +     +   N      E  KI 
Sbjct: 182 LVV----EKGTP-GLSFGKPEKKLGWKSQPTCAVIFEDC---RVPVANRIGAEGEGFKIA 233

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L+    S+ G R  +  A+ Y  +R   G  +      +  +AD+A      
Sbjct: 234 MKGLDGGRLNIGACSLGGARECIRLAVDYTNQRQQFGQAVSAFQNTQFQLADMA------ 287

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           T L          A +   + A A  +  + K        +V+  A++  GG GYI+E  
Sbjct: 288 TELEAARLLLHRAAAALDAKDANATTLCAMAKRLATDTGFSVVDRALQLFGGYGYIKEYP 347

Query: 430 IARHYRESPANSILLGSGNAM 450
           I R+ R+   + IL GS   M
Sbjct: 348 IERYLRDLRVHRILEGSNEIM 368


>gi|268316992|ref|YP_003290711.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334526|gb|ACY48323.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 415

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 22/218 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ +  +++ DG + L+G K W  ++P++D  ++ A
Sbjct: 125 PKLATGELIGCFGLTEPDHGSDPGSMETTARRV-DGGWILNGTKAWITNAPIADIAVVWA 183

Query: 248 QV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +       EG +  F++ R +      GL     KNK+  R+++T E+   + F   + D
Sbjct: 184 RAKEHPDDEGEIMGFILERDMP-----GLSTPETKNKMSLRASSTGEIVMEDVF---VPD 235

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMK 356
            NV  G          L +A   ++   V  AE  +   RR+V      G  L    +++
Sbjct: 236 ANVLPGVRGLRGPFSCLSNARYGIAWGTVGAAEDCYQRTRRYVMERTQFGYPLAAMQLIQ 295

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
             +A++  +I     L FRL    DE K    + + A+
Sbjct: 296 TKLANMLTEITQMQLLVFRLGQLADEGKVTPAQISLAK 333


>gi|229092097|ref|ZP_04223280.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-42]
 gi|229122648|ref|ZP_04251859.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           95/8201]
 gi|228660900|gb|EEL16529.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           95/8201]
 gi|228691262|gb|EEL45025.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock3-42]
          Length = 395

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 259 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 318

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 319 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|226227107|ref|YP_002761213.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226090298|dbj|BAH38743.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 405

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 138/323 (42%), Gaps = 48/323 (14%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S S+T ++   L T+P V K   P+   R Y P     +    V  G GLTE+  G+D  
Sbjct: 84  SHSITISAHTTLGTSPIV-KFGTPEQIQR-YVPL----LASGKVLGGFGLTEEAAGSDAG 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL--------- 262
              +   K  D  Y L+G K F++ + + + F++ A  +   G   +   +         
Sbjct: 138 GTRTTAVKQGD-RYILNGSKRFITHAGVGEIFVVTAVTDPSKGTKGISSFILTKDSVDLE 196

Query: 263 ---------EDGSPN--GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
                    +D   N  G    + ++K+G R++ T EL F N       LLG   +  G 
Sbjct: 197 ACRVHGVGHDDSLVNMKGFTAGKKEDKMGWRASDTRELLFDNVEVPAENLLGTEGL--GF 254

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              MK L   D+  + ++ + + +A     E++ YA  R   G  +     ++  ++D+A
Sbjct: 255 TNFMKTL---DAGRIGIAALSIGIAQGALEESLKYASVRKQFGSPISSFQGIQFQLSDMA 311

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I A   L +  A         S+EAA A++       +C ++A     +A++  GG G
Sbjct: 312 TEIEAGRHLMYHAAWLSQNGHPFSKEAAMAKL-------FCSEVAMKATIKAIQVHGGYG 364

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y ++  + R+ R++    I  G+
Sbjct: 365 YTKDYPVERYMRDAKICEIGEGT 387


>gi|332838246|ref|XP_508872.3| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Pan
           troglodytes]
          Length = 415

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDVYVVMCRTGGPGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 268

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 269 ----AVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMAT 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 325 RLVAAR-LMVR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 378

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 379 LKDYAVQQYVRDSRVHQILEGSNEVM 404


>gi|291230593|ref|XP_002735248.1| PREDICTED: long-chain acyl-CoA dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 422

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 38/269 (14%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----- 252
           + +TE   G+D+  I T   Q  SD  + L+G K F+++  M+D  I++A  +       
Sbjct: 162 IAMTEPGAGSDLQGIRTYAKQDGSD--WILNGSKVFITNGYMADLVIVVAVTKPDAKSPA 219

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN---- 303
             +  FLV   +E     G    +   K+G ++  T EL F +       +LG  N    
Sbjct: 220 HGITLFLVEEGME-----GFKKGKKLQKMGLKAQDTAELFFEDVRLPASAVLGQANKGFY 274

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++  P E  ++LI    ++M  +       E   Y R+R   G  L     ++  +A+
Sbjct: 275 MLMNELPRE--RLLI----SVMGQAACEFMFEETRSYVRQRKAFGKTLSHLQTIQHKLAE 328

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I    A +     SF+E +  S         A + KYW   +   V  + ++  GG
Sbjct: 329 LKTEICVGRAFTDSCLQSFNEKRLDS-------FTASMAKYWTSDLQNKVAYQCVQMHGG 381

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  I + Y ++    I  GS   M
Sbjct: 382 WGYMMEYPICKAYLDARVQPIYGGSNEIM 410


>gi|332974475|gb|EGK11398.1| glutaryl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 396

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 33/285 (11%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S +++ ++  +H  WA   +  E       P   +   +G  GLTE   G+D  ++ ++ 
Sbjct: 102 SAMSVQSSLVMHPIWA---YGTEAQKEKYLPKLASGEYVGCFGLTEPDAGSDPGSMKTRA 158

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +K+ DG Y L G K W  +SP++D F++ A+  +  +  F++ + ++     GL   +++
Sbjct: 159 KKV-DGGYQLKGSKMWITNSPIADVFVVWAKDDDDDIRGFVLEKGMK-----GLSAPKIE 212

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K   R++ T E+   + F        D+    GP         L+ A   ++   +  A
Sbjct: 213 GKFSLRASITGEIVMDDVFVPEENAFPDIRGLKGP------FGCLNKARYGIAWGSMGAA 266

Query: 334 EAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E    A R++       ++P     +++  +AD+  +IA     + R+    DE  +  E
Sbjct: 267 EFCWKAARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAALRVGRLMDEHNAAPE 326

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  M  I K   C  A  +   A +  GG+G  +E  + RH
Sbjct: 327 -------MISIIKRNNCGKALNIARVARDMHGGNGVSDEFHVIRH 364


>gi|307611459|emb|CBX01128.1| hypothetical protein LPW_28271 [Legionella pneumophila 130b]
          Length = 382

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 45/305 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A++ +  +KI  G + L+G K W  +
Sbjct: 104 FGSEEQKKRYLPEMAAGNIIGCFGLTEPDSGSDPASMRTHAKKIEGG-WILNGAKMWITN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +P++D  I+ A+ E  +  F+V     D    G+    +K K+  R++ T EL F N F 
Sbjct: 163 APIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLRASITGELVFDNVF- 216

Query: 297 FLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE------------AIHYAR 340
                       V D  +L      L +A+  +S  R  +A             A  Y  
Sbjct: 217 ------------VPDENLLPKSEKGLGAALSCLSQARYGIAWGAMGAAMACFDIARDYLL 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M  + 
Sbjct: 265 ERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMISLA 317

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L VL     
Sbjct: 318 KGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLGRHIT 376

Query: 461 GTNLF 465
           G N F
Sbjct: 377 GINAF 381


>gi|307324577|ref|ZP_07603784.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306889821|gb|EFN20800.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 388

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 57/290 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
            GLTE  GG+D  A  +  +   + G + ++G K F+++  +D  A + +  V GR    
Sbjct: 125 FGLTEPGGGSDAGATRTTARLDETTGEWVINGTKCFITNSGTDITALVTVTAVTGRKEDG 184

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
              +   +VP     G+P G       +K+G  ++ T EL F++       LLG    + 
Sbjct: 185 RPEISSIIVP----SGTP-GFTVAAPYSKVGWNASDTRELSFADCRVPAANLLG--AEAR 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G  + ++IL   D   +++S +   LA     E++ YAR R   G     +P        
Sbjct: 238 GYAQFLRIL---DEGRIAISALATGLAQGCVDESVAYARTREAFG-----RP-------- 281

Query: 362 IALDIAAATALSFRLAN----------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
               I A  A+ F+LA+          ++ +A SR       +  A I K +  ++A   
Sbjct: 282 ----IGANQAIQFKLADMEVRAHMARVAWRDAASRLVLGEPFKKEASIAKLYSSEIAVDN 337

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             EA +  GG G++ E  +AR +R+S    + +G G + V  +L   E G
Sbjct: 338 AREATQIHGGYGFMNEYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 385


>gi|300789736|ref|YP_003770027.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799250|gb|ADJ49625.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 384

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 49/280 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQV-----EG 251
           G GLTE  GG+D  A  ++     D  + ++G K F+++  +D   F+    V      G
Sbjct: 123 GFGLTEPGGGSDAGATRTRASLDGDE-WVVNGSKAFITNSGTDITRFVTATAVTDVMENG 181

Query: 252 R--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           R  +   L+P     G+P G       +K+G   + T EL FS        D+ V   PV
Sbjct: 182 RKEISAILIP----SGTP-GFAVAPKYSKVGWNCSDTHELSFS--------DVRV---PV 225

Query: 310 EDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           E++         + L  LD   ++++ + V LA     E + Y + R   G  + +   +
Sbjct: 226 ENLIGVRGRGYAQFLSILDEGRVAIAALSVGLAQGCVDECLKYVKDRVAFGKRIGEYQAI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ +    A    ++ A+     +   +EA+ A+++A          A     +A
Sbjct: 286 QFKIADMEVRTHTARLAYYQAASKMLRGEPFKKEASIAKLVA-------SNAAMDNARDA 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG G++ E  ++R YR+  A  + +G G + V  +L
Sbjct: 339 TQIFGGYGFMNEFPVSRFYRD--AKILEIGEGTSEVQKML 376


>gi|271967671|ref|YP_003341867.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270510846|gb|ACZ89124.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 48/285 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252
            GLTE  GG+D+         +    + ++G K F+++  +D    + +A + G      
Sbjct: 122 FGLTEPGGGSDVPGGMRTTAVLDGDEWVINGSKAFITNSGTDITGVVGVAAITGERADGK 181

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   LVP     G+P G    +  +K+G   + T EL FS        D  V   P E
Sbjct: 182 KEISTILVP----SGTP-GFTVSKKYSKVGWNCSDTRELSFS--------DCRV---PAE 225

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           ++         + L  LD   ++++ + V LA     E++ Y R R   G  +     ++
Sbjct: 226 NLLGERGRGYAQFLQTLDEGRIAIAALSVGLAQGCVDESLRYVRERRAFGHPIGHYQAIQ 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ +    A    +  A      +   +EAA A+++A        +       +A 
Sbjct: 286 FKIADMEVRTHTARLAYYHAAEKMLAGEPFKKEAAIAKLVAGDAAMDNAR-------DAT 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG G++ E  + R YR+  A  + +G G + V  +L   E G
Sbjct: 339 QIFGGYGFMNEYPVGRFYRD--AKILEIGEGTSEVQRMLIARELG 381


>gi|226361423|ref|YP_002779201.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239908|dbj|BAH50256.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 39/275 (14%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV---- 249
           +   + +TE   G+D+A I +  +  +DG  Y LSG K F++   ++D  +++ +     
Sbjct: 120 IMFAIAMTEPGTGSDLANIATSAKLSADGSHYVLSGAKTFITGGALADRILVVCRTAPST 179

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             + R G  +   L+ D +  G    R   KIG +++ T EL F++        + V+  
Sbjct: 180 PEDRRAGLTI---LVVDTTAEGFAVGRKIEKIGLKASDTAELSFTDV------KVPVADR 230

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVM 355
             E+     YL     +++  R+S+A             AI Y + R V G  +      
Sbjct: 231 LGEEGAGFRYL---THNLAQERLSIALGGSATAAAALQHAIAYVKERTVFGKPVAAFQNT 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           K  +A+ A ++ A   ++ R     D  +    +AA A++       +C + A  VI + 
Sbjct: 288 KFVLAECATEVEAIQLMADRALELHDAGELTVADAAKAKL-------FCTEAAGRVIDKC 340

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GYI E  IAR Y ++  + I  G+   M
Sbjct: 341 LQLHGGYGYILEYPIARLYADTRVSRIYGGTSEVM 375


>gi|195335832|ref|XP_002034567.1| GM21947 [Drosophila sechellia]
 gi|194126537|gb|EDW48580.1| GM21947 [Drosophila sechellia]
          Length = 627

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 267

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 268 PPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 324

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 325 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG GY+ +  + R  R+     I  G
Sbjct: 384 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGYMVDTGLERVLRDLRIFRIFEG 436

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 437 TNDILRL 443


>gi|196042923|ref|ZP_03110162.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus 03BB108]
 gi|196026407|gb|EDX65075.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus 03BB108]
          Length = 382

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYTVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|83717970|ref|YP_439144.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|257142257|ref|ZP_05590519.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651795|gb|ABC35859.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 393

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +     + L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-RFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S      +AR           + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--AHVRHARKDCAGVILHTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|88796988|ref|ZP_01112578.1| Isovaleryl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88779857|gb|EAR11042.1| Isovaleryl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVG- 254
           L ++E   G+D+ ++  + +   D  Y L+G+K W  + P +D  ++ A+ +   G+ G 
Sbjct: 127 LAMSEPGAGSDVVSMKLKAEDKGD-HYLLNGNKMWITNGPDADVLVVYAKTDPNGGKRGI 185

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+    E   P     Q+L +K+G R + T EL F +     +   N+     + +K
Sbjct: 186 SCFLI----EKDFPGFKTAQKL-DKLGMRGSNTCELVFEDC---KVPKENLMGKEGDGVK 237

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           IL+  LD   + +S      M+ ++   + Y   R   G  + +  +++  +AD+  ++ 
Sbjct: 238 ILMSGLDYERVVLSAGPLGIMQAAMDIVLPYVHERKQFGQAIGEFQLVQGKLADMYTNLN 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ A  + +A + D  ++  ++AA A +       +  + A  V  +A++ +GG+GYI E
Sbjct: 298 ASRAYVYAVAAACDRGETTRKDAAGAIL-------YAAEKATQVALDAIQLLGGNGYINE 350

Query: 428 RSIARHYRESPANSILLGS 446
            +  R  R++    I  G+
Sbjct: 351 YATGRLLRDAKLYEIGAGT 369


>gi|326403766|ref|YP_004283848.1| putative acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050628|dbj|BAJ80966.1| putative acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 599

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 116/291 (39%), Gaps = 36/291 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +A IT+     +DG + L G K ++S    +       ++LA++ G     
Sbjct: 163 LSEPQAGSSLADITTTATPRADGTFSLRGSKMWISGGDQEISENIVHMVLARIAGAPAGT 222

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG-- 300
             +  FLVP+   D     G  N +    L +K+G R      L F     T G L+G  
Sbjct: 223 RGISLFLVPKRRVDESGAVGESNNIALAGLNHKMGQRGTTNCLLNFGESGETIGHLIGAP 282

Query: 301 --DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354
              L      + + +I +   + + +++G R S   A    + R          PV    
Sbjct: 283 HRGLEYMFQMMNEARIGVGHAATMSALAGYRHSADYARTRTQGRRAGQKDPSAPPVPIVE 342

Query: 355 ---MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
              ++R +      +  A AL    A   D      +A  ++   A   ++ P+ K W  
Sbjct: 343 HADIRRMLLAQKAAVEGAQALCLYAAQLVDRQEIATDADEKAWLGALLGLLTPVVKSWPS 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +        AM+ +GG GY  +  + R YR++  N I  G+     +D++ 
Sbjct: 403 EHCLEANKWAMQILGGYGYTRDYPLERLYRDNRLNHIHEGTFGIQGIDLVG 453


>gi|300712593|ref|YP_003738406.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126277|gb|ADJ16615.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 388

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +     GL ++E   G+D+A +T++ +K  D  + L+G K+++ + + +D   + A+
Sbjct: 116 PVAEGKQITGLAVSEPETGSDLAGMTTRAEKDGDE-WVLNGEKYWVGNAVEADWLTVYAK 174

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
            +           F+VP        +G   + +  K+  R++    + F N       L+
Sbjct: 175 TDDSDHRYSNYSLFIVPT-----DTDGYEAEHIPEKMAFRASKQGHITFDNCRIPSQNLV 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPV 354
           G  N         K++ + +   + V G  + +A     E   +   R   G  + D   
Sbjct: 230 GTENEGF-----YKLVEFFNDERVVVGGHGLGMAAAAIEETWEFVHDREAFGKNVSDFQA 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+ +D  +A A+++R AN       R E+ +   +   I K    + A      
Sbjct: 285 VQHDLADMRIDFESARAVNWRAANK----ALRGEDTS---LWGAIVKTKSTETAVTCAER 337

Query: 415 AMECIGGSGYIEERSIARHYRE 436
            M+  GG   + +R IAR YR+
Sbjct: 338 GMQLHGGRSILTDRRIARIYRD 359


>gi|224368857|ref|YP_002603019.1| Acd7 [Desulfobacterium autotrophicum HRM2]
 gi|223691574|gb|ACN14857.1| Acd7 [Desulfobacterium autotrophicum HRM2]
          Length = 453

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 32/278 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           I    +E   G+D++++    +   +  Y L+G K W  +  ++D F + A V+      
Sbjct: 121 ISFATSEPTMGSDVSSVRCLARPDGED-YILNGTKYWVTNGGIADYFSIFATVDPEKKHQ 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
            +     D    G+   +   K+G RS+ TV + F N              GFLL     
Sbjct: 180 GICAFFVDRKWPGIRVGKPIPKMGQRSSNTVGVHFDNVRVPKDHILAEPGEGFLLSMRTF 239

Query: 305 S-TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           S T PV              ++   R ++  A+ YA++R      + D   ++  I+++ 
Sbjct: 240 SRTRPV----------IGAFAIGAARSAMEYAMDYAKKRRAFDQKIGDFQAIQFKISEMY 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+  L ++ A   D     +       + A I K++  + A  V++EA++ +GG G
Sbjct: 290 QKIEASRLLVWKAAWEADNGVDPT-------LNASIAKFYATETAIEVVSEALQILGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y +   + + YR++    I  G+     + V   L  G
Sbjct: 343 YTKMFPLEKLYRDTRLLRIYEGTSEVQRMIVAGYLMGG 380


>gi|215425459|ref|ZP_03423378.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T92]
          Length = 433

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 51/271 (18%)

Query: 222 SDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR------VGCFLVPRLL---EDGS 266
           +DG + + G K F++S  S D F     ++LA+ EG       +  + VP+ L   E G 
Sbjct: 6   ADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFDVETGE 65

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP----VEDMKIL 315
           P   NG+    +++K+G + +AT EL F        G+L+G+++         +E  +++
Sbjct: 66  PGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIEQARMM 125

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADI 362
           +       +++ +      A+ YA+ R V G  L                P ++R++   
Sbjct: 126 V----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDKTAPRVTITHHPDVRRSLMTQ 180

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARI-------MAPITKYWCCKMAPAVIAEA 415
                   AL    A   D A +       A++       M P+ K    + A A + E+
Sbjct: 181 KAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDLMLPVVKGVGSEQAYAKLTES 240

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GGSG++++  I ++ R++  +S+  G+
Sbjct: 241 LQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 271


>gi|119715065|ref|YP_922030.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535726|gb|ABL80343.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 33/294 (11%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P   + E             +   +G+TE   G+D+AA+ +  +  S+G
Sbjct: 103 LTTPEQRQRWLPGFVTGE-------------LVTAIGMTEPSVGSDLAALRTTAEPCSEG 149

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  S D  ++ A+         +     +    G    R  +K+G   
Sbjct: 150 -WRLNGSKTFITNGSSADLVVVAARTTPGSRSRGISLFAVEADRRGFSRGRKLDKVGQPE 208

Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
             T EL F        N  G L        G +   +I     +A  +++     L E +
Sbjct: 209 ADTAELFFEDLVLPAENLIGTLDRGFQHMMGGLTQERI----GAATSNIAHAAQILDETL 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  +      K  +A++A  +        +       A SR E      + 
Sbjct: 265 GYVRERRAFGSPIGSFQHNKFLLAELATRVEVTQTFVHQCVL----AHSRGE---LTPVD 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A   K+W   +   V+   ++  GG G++ E+ +AR ++++    I  GS   M
Sbjct: 318 AAKAKWWSADVQNDVVDHCVQLHGGYGFMNEQRVARAWQDARVTKIWAGSNEIM 371


>gi|332286696|ref|YP_004418607.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330430649|gb|AEC21983.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 380

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 23/257 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P  +     G GL+E  GG++I A+T++ +K+ DG + L G K +++ +P +D  ++ A+
Sbjct: 113 PAMRGEKISGFGLSEPDGGSNIRAMTTKAEKV-DGGWKLRGAKLYITNAPFADFLLVAAR 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
               +    +   + +    G    +LK K G R++ T  +   + F     LLG++  S
Sbjct: 172 TSPELTPDAISLFIVELPNAGFEIHKLK-KEGIRASETGLIHIDDAFVPDDCLLGEVTGS 230

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
             PV    IL  L    + V+   + +       A  YA  R V+G  + D   +   +A
Sbjct: 231 Y-PV----ILECLSENRVGVAANALGMARAALDAARAYADERIVAGKRIGDYQAIAHRLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D++ +I AA  L +  A   D+    S  AA  +++A  T       A     +A+  +G
Sbjct: 286 DMSANIEAAKWLVYYGAWRVDQGTLDSATAAKVKLIATET-------AVQTSEQAIRILG 338

Query: 421 GSGYIEERSIARHYRES 437
           G+G + E S+ R +R++
Sbjct: 339 GAGIMREYSVGRIHRDA 355


>gi|291451433|ref|ZP_06590823.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291354382|gb|EFE81284.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGSHYVLNGAKTFITGGVHADRVIVCARTAAPTPEDR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F +   + D +  G    R  +K+G R++ T EL F+        D+ V   PVED+
Sbjct: 184 R--FGISLFVVDTTSEGYAVGRKLDKLGLRTSDTAELSFT--------DVKV---PVEDL 230

Query: 313 -----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                K   YL   +          + +    ++  A  Y + R V G  +      K  
Sbjct: 231 LGEENKGFAYLGQNLPQERLGIAVGAYAQAAAAIRFAKEYVQDRTVFGKTVASFQNTKFE 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A+  R   + D  +  +         A   K +C ++A  VI   ++ 
Sbjct: 291 LAACQAEVDAAEAVCDRALEAHDAGELSA-------AEAASAKLFCTEVASRVIDRCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GG GY+ E  IAR Y ++  N I  G+   M +
Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKM 377


>gi|228953411|ref|ZP_04115457.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228806308|gb|EEM52881.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 382

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 111/239 (46%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +P G+  +   + +  R  A+ +L   N         ++  G V+   +  L+++ +
Sbjct: 189 --NTP-GVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P ++R + ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|163761300|ref|ZP_02168375.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281457|gb|EDQ31753.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 390

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 45/301 (14%)

Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           AP I  F  E       P   T   IG + +TE   G+D+  I +  +K  DG  Y ++G
Sbjct: 106 APYILHFGSEEQKQKWLPKMATGELIGAIAMTEPGAGSDLQGIKTSAKK--DGNHYVING 163

Query: 231 HKWFLSSPMSDAFIMLAQ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++      I++       +G  G  L+  ++E     G    R  +K+G +SN T
Sbjct: 164 SKTFITNGQHANLIIVVSKTDPAKGAKGTSLM--VVETDEVEGFRRGRNLDKVGLKSNDT 221

Query: 287 VELEFSNT---------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            EL F +                F  L+ +L     P E  ++LI    A  ++S +  +
Sbjct: 222 SELFFDDVRIPTANMLGTEEGQGFAQLMTEL-----PQE--RLLI----ANQAISMIERA 270

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA  I Y + R   G  +ID    +  +A++  +   A           +       +  
Sbjct: 271 LAITIDYVKERKAFGKAIIDFQNTQFKLAELKSEAVMARVF-------VNHCVGEHLKGQ 323

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +   A + KY    +   V  E ++  GG GY+ E  +AR +R++    I  G+   M 
Sbjct: 324 LSTTTASMAKYLTTDLQCKVADECVQLHGGYGYMNEYPVARMFRDARVQRIYGGTNEIMK 383

Query: 452 L 452
           L
Sbjct: 384 L 384


>gi|163750079|ref|ZP_02157322.1| Acyl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161330136|gb|EDQ01118.1| Acyl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 391

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  A+ ++ ++I DG Y L+G K W  +SP++D FI+  ++EG +  F  
Sbjct: 136 FGLTEPDVGSDSGAMKTRVERI-DGGYRLNGAKMWITNSPIADVFIVWGKLEGTIRGF-- 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ K   R++ T E+   N       LL ++    GP       
Sbjct: 193 --ILEKGM-KGLSAPKIEGKFSLRASITGEIVMDNVEVPESALLPNVEGLKGPFG----- 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   +A R++    I  ++P     ++++ +AD+       T
Sbjct: 245 -CLNKARYGIAWGVLGAAEFCWHAARQYTLDRIQFNRPLAANQLIQKKLADM------QT 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++  L       +   ++A     ++ I +  C K A  +   + +  GG+G  +E  +
Sbjct: 298 EITLGLFACLQAGRLMDQDALPVEAISLIKRNSCGK-ALDIARLSRDMHGGNGISDEFHV 356

Query: 431 ARH 433
            RH
Sbjct: 357 IRH 359


>gi|325922917|ref|ZP_08184632.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325546607|gb|EGD17746.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 416

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 162 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGSKMWITNGSIASLAIIWAHTDDGVCGFLV 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                + S      Q + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 221 -----ETSSAVFSAQDIAHKMSLRASVTSGLFLDNVFVPEQMRLPNAAGLKAPLGCLNQA 275

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ Y+ +R + G  L      +  +AD+A  I+ A  L+ +L
Sbjct: 276 RYGIAWGAIGAAVACLREALAYSGQRILFGRPLAATQSAQIKLADMARRISTAQLLALQL 335

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +    R E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 336 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 385


>gi|317034327|ref|XP_001396524.2| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
          Length = 440

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 46/278 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K  DG Y L     KW  +   SD   M  +  G     +
Sbjct: 160 IAITEPEAGSDVANITTTATKTPDGKYYLVNGAKKWITNGIWSDFATMAVRTGGPGASGL 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
              LVP     G P G+  + LK   G  ++ T  +E        L D+ V   PVE+  
Sbjct: 220 SLLLVPL---KGHP-GVTMRPLK-VTGPITSGTTYIE--------LDDVKV---PVENLV 263

Query: 312 ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK--- 356
                 M++++       L  A+      RV+L+ A  Y  +R   G  L+DQPV++   
Sbjct: 264 GREGDGMRMIMTNFNHERLSIAVGVTRQARVALSTAFQYCLKREAFGKTLMDQPVVRNRL 323

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIA 413
            RA A++    A    L ++L +   E   R      A A+  A +    C + A  +  
Sbjct: 324 ARAGAELETLGAFVEQLLYQLCHLSKEEGDRRLGGITALAKAKAGMVLNECAQCAILLFG 383

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A    GG G + E  +    RE PA  I  GS + ++
Sbjct: 384 GAGLTQGGQGELVESIL----REVPAARIPGGSEDVLL 417


>gi|304406434|ref|ZP_07388090.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304344492|gb|EFM10330.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 592

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +  +   DG  Y L+G K +++ +  +D +I+ A+V+G     F+V
Sbjct: 148 LTEPGSGSDALGARTTARLSPDGSHYLLNGSKLYITNAAFADIYIVYAKVDGDHFTAFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R    G+P G      + K+G + ++T  L F +       +LG++        ++  +
Sbjct: 208 ER----GTP-GFTVGPEEKKMGIKGSSTCPLFFEDAPVPVANVLGEVGKGHQIAFNILNI 262

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                    V   + ++  ++ YA  R   G  +   P++   +AD+ +      ++ +R
Sbjct: 263 GRFKLGAGCVGTAKEAIRLSVGYAAARKQFGRPIASFPLIGAKLADMNIAAFVMESMVYR 322

Query: 376 LANSFDEAKSRSEEAA---YARIMAPITKYWC-CKMAPAVIAEAMECI--------GGSG 423
            A   DE  S+++  A    A+    I +Y   C +      EA++ I        GG G
Sbjct: 323 TAGWIDEGLSQADPNAPDSGAQAAKAIAEYALECSIVKVFATEALDYIADEGVQIHGGYG 382

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y++E  I R YR+S  N I  G+
Sbjct: 383 YMQEYKIERIYRDSRINRIFEGT 405


>gi|163854857|ref|YP_001629155.1| putative acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258585|emb|CAP40884.1| putative acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 389

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 21/253 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA++   +   D  Y L G K W  +  ++D + + A+     G   +  
Sbjct: 135 LSEPDAGSDVAALSCSARADGDH-YVLDGAKTWISNGGIADFYCVFARTGEAPGARGISA 193

Query: 261 -LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            ++E G+P     +R++    + +   +     +  S   G       ++      M + 
Sbjct: 194 FVVEAGTPGLDIAERIEVMAPHPLATLAFDNCRIPASQRLGEPGQGFKLAM-----MTLD 248

Query: 316 IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           I+  S   +  G  R +L EA+  AR R + G  L D  + + A+ D+A  I AA  L++
Sbjct: 249 IFRASVAAAALGFARRALDEAVSRARGRRMFGQALADLQLTQAALGDMATAIDAAALLTY 308

Query: 375 RLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           R A   D    R + EAA A++ A        + A AVI  A++  GG+G +    + + 
Sbjct: 309 RAAWLRDVQGVRTTREAAMAKMAA-------TESAQAVIDRALQMFGGAGVVSGMPVEKL 361

Query: 434 YRESPANSILLGS 446
           YRE  A  I  G+
Sbjct: 362 YREIRALRIYEGA 374


>gi|12805021|gb|AAH01964.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Homo sapiens]
 gi|123980380|gb|ABM82019.1| acyl-Coenzyme A dehydrogenase family, member 8 [synthetic
           construct]
 gi|123995199|gb|ABM85201.1| acyl-Coenzyme A dehydrogenase family, member 8 [synthetic
           construct]
          Length = 415

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGLGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F            S   GFL+    +
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGL 273

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     +   R   G  L     ++  +AD+A 
Sbjct: 274 NGGRI---------NIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMAT 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 325 RLVAAR-LMVR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 378

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 379 LKDYAVQQYVRDSRVHQILEGSNEVM 404


>gi|115351286|ref|YP_773125.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115281274|gb|ABI86791.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 609

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 117/306 (38%), Gaps = 51/306 (16%)

Query: 253 VGCFLVPRLL--EDGSPNG----LCYQRLKNKIGNRSNATVELEF-----------SNTF 295
           +  F+VPR L  +DG+  G    +    L +K+G R      L F           +   
Sbjct: 233 ISLFIVPRYLPTDDGAARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGAI 292

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI-- 348
           G+L+G+ N     +  M     ++ A + V    V+L       A+ YAR R     +  
Sbjct: 293 GYLVGEPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYARNRPQGRALGP 347

Query: 349 -----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAA 391
                      ++  P ++R +      +    AL    A   DEA++      R E A 
Sbjct: 348 AGKDAAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHDDAALRVEAAQ 407

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I+ PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     
Sbjct: 408 LLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQA 467

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
           LD+L    K       L  TL+  +G++ ++      D  S       LAR     + L 
Sbjct: 468 LDLLG--RKVGQDDGALLRTLDARIGATLQRARAADGDPHSHA---DALARRWARLVELT 522

Query: 512 SSAAAL 517
            + AAL
Sbjct: 523 RALAAL 528


>gi|320165880|gb|EFW42779.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 431

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 19/240 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
            GLTE   G+D  ++ ++ +K   G Y L+G K W  +SP++D F++ A+   +G +  F
Sbjct: 173 FGLTEPNHGSDPGSMETRARKTPQGNYILNGAKMWITNSPIADVFVVWAKTVEDGIIRGF 232

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
               +LE G   GL   +++ K   R++ T E+   +       LL ++    GP   + 
Sbjct: 233 ----VLEKGM-KGLSAPKIEGKFSLRASPTGEIVMQDVEVPAENLLPNVEGLKGPFGCLT 287

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              Y   +  ++      +  A  Y   R   G  L    ++++ +AD+  +I      S
Sbjct: 288 NARY-GISFGAMGAAEFCMEAARTYTVDRKQFGRPLASNQLIQKKLADMLTEINLGLLAS 346

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++    D  K   E       M  + K   C  A  +   A + +GG+G  +E  + RH
Sbjct: 347 LQVGRLKDAGKLAPE-------MVSLVKRNNCGKALDIARVARDMLGGNGISDEYGVIRH 399


>gi|302382986|ref|YP_003818809.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193614|gb|ADL01186.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 379

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 44/269 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +      D  + L+G K F+S +  SD ++++A+        +   
Sbjct: 124 LTEPGSGSDAAAMRTSATLDGD-TWVLNGSKAFISGAGTSDVYVVMARTGEPGPKGISAF 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++E G+P GL +   + K+G  S  T  ++F +              GF    + +  G 
Sbjct: 183 VVEKGTP-GLSFGAQEKKMGWNSQPTAIVQFDDCRVPAANLLGKEGDGFRYAMMGLDGG- 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+ A  S+ G R++L  A  Y   R   G  L +    +  +AD+A  + A
Sbjct: 241 --------RLNIAACSIGGARLALETAQTYVASRKQFGKALAEFQNTQFKLADMATALEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC---KMAPA----VIAEAMECIGG 421
           A  +  R A + D   +R  EA         TK WC    +MA      +  EA++  GG
Sbjct: 293 ARLMVLRGAWALD---TRHPEA---------TK-WCAMAKRMATDACFDIADEALQLHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+++  + R  R+   + IL G+   M
Sbjct: 340 YGYLKDYPLERIVRDLRVHRILEGTNEIM 368


>gi|224162418|ref|XP_002338440.1| predicted protein [Populus trichocarpa]
 gi|222872331|gb|EEF09462.1| predicted protein [Populus trichocarpa]
          Length = 332

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 54/294 (18%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           R+Y P     M +  +   + +TE   G+D+  + ++ + + DG Y ++G K F+++ + 
Sbjct: 61  RKYLP----AMARGELVGAIAMTEPGAGSDLQGVRTRAE-LRDGRYRINGSKTFITNGLL 115

Query: 241 DAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
              I++       +G  G  ++  ++E     G    R+ +K+G ++  T EL F +   
Sbjct: 116 AGLILVVCKTDPAQGARGTSIL--IVETKDCAGFRVGRVLDKMGMKAQDTSELFFDDVTV 173

Query: 296 ------------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
                       GF  L+GDL     P E + I       + +++ M  +    + Y R 
Sbjct: 174 PQDALLGGREGQGFYQLMGDL-----PYERLII------GLAALACMEGAYEATLAYVRE 222

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFR-----LANSFDEAKSRSEEAAYARIM 396
           R   G  + D    +  +A++A  +    A   R     +A + D A             
Sbjct: 223 RRAFGQAIADMQNTRFKLAEVATTLTVGRAFIDRCVEQLVAGTLDTAT------------ 270

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A + K W  +    V+ E ++  GG GY+ E  + R Y ++    I  G+   M
Sbjct: 271 ASMAKLWGSEAQGRVLDELVQLHGGYGYMNEYMVTRMYADARVQRIYGGTSEIM 324


>gi|164656967|ref|XP_001729610.1| hypothetical protein MGL_3154 [Malassezia globosa CBS 7966]
 gi|159103503|gb|EDP42396.1| hypothetical protein MGL_3154 [Malassezia globosa CBS 7966]
          Length = 422

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 31/250 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGR----VG 254
           +TE   G+D+A I+++ +K  D  + L+G K W  +   ++ + +LA+   E R    + 
Sbjct: 163 VTEPGAGSDVANISTRAEKRGDK-WVLNGTKMWITNGGHANWYFVLARTNPEERPHKALS 221

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307
            F+V     DG   G+   + +  +G R + T       VE+   N  G       ++ G
Sbjct: 222 GFIV-----DGDAPGVLRGKKEINMGQRCSDTRMITFEDVEVPEENLLGKPGDGFKIAMG 276

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +  + L+    A  +V   + +L EA  YA+ R   G  +ID   +   +AD+ + + 
Sbjct: 277 AFDITRPLV----ASGAVGLAQRALYEATVYAKERKTMGKSIIDHQAVAFMLADMQMAVE 332

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++  L ++     D+ K  S  A+ A+ +A        + A +   +A++  GG G+  E
Sbjct: 333 SSRNLVWKACWYKDQGKRNSFYASMAKCLA-------SRAAVSNADQAVQIYGGLGFNSE 385

Query: 428 RSIARHYRES 437
            ++ + YR++
Sbjct: 386 SAVEKLYRDA 395


>gi|239979564|ref|ZP_04702088.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+      E R
Sbjct: 120 IAMTEPGTGSDLAGMKTTAKLSADGSHYVLNGAKTFITGGVHADRVIVCARTAAPTPEDR 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F +   + D +  G    R  +K+G R++ T EL F+        D+ V   PVED+
Sbjct: 180 R--FGISLFVVDTTSEGYAVGRKLDKLGLRTSDTAELSFT--------DVKV---PVEDL 226

Query: 313 -----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                K   YL   +          + +    ++  A  Y + R V G  +      K  
Sbjct: 227 LGEENKGFAYLGQNLPQERLGIAVGAYAQAAAAIRFAKEYVQDRTVFGKTVASFQNTKFE 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA A+  R   + D  +  +         A   K +C ++A  VI   ++ 
Sbjct: 287 LAACQAEVDAAEAVCDRALEAHDAGELSA-------AEAASAKLFCTEVASRVIDRCLQL 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GG GY+ E  IAR Y ++  N I  G+   M +
Sbjct: 340 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKM 373


>gi|239830878|ref|ZP_04679207.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823145|gb|EEQ94713.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 403

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/315 (20%), Positives = 136/315 (43%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P   + + PK+ S E+              +G L ++E   G+D+ ++    +K  +  
Sbjct: 124 SPGQREKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLHAEKRGE-R 168

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + + +  G    +  +K+G R +
Sbjct: 169 YILNGNKMWITNGPDADVLVVYAKTDPSAGPRGISAFIVEKTFKGFSTAQKLDKLGMRGS 228

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 229 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 284

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A ++ +A + D  ++  ++AA 
Sbjct: 285 YVHERK-----QFDQPIGEFQLMQGKLADMYVTFNASRAYTYAVAAACDRGETSRKDAAG 339

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 340 CIL-------YTAENATQMALQAIQALGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 390

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 391 RML----IGRELFQE 401


>gi|225557444|gb|EEH05730.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 515

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +  +K  DG  Y ++G  KW  +   +D F+   + +      L
Sbjct: 248 LAVTEAFAGSDVAGIRTTAEKTPDGKHYIINGTKKWITNGMWADYFVTACRTDKGYSVIL 307

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +PR       N +  +R+K      + AT  ++F N       LLG+ +   G +  M  
Sbjct: 308 IPR------DNNVETKRIKTSYSTAA-ATAFIQFDNVKVPVENLLGEEH--KGFIVIMSN 358

Query: 315 LIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA- 371
             +   A+        R  + E + +A +R + G  LI+QPV+++ +A +   + A+ + 
Sbjct: 359 FNHERWAMTCGVTRWCRTVVEECLKWANQRIIFGKPLINQPVIRQKLAKMISLVEASQSW 418

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE 426
              +++++ N     +SR        +  PI   K +  + A  +  +A+   GG G  +
Sbjct: 419 LETITYQMCNMSYRERSR-------HLGGPIGLLKSYSTRCAHEIADDAVNIFGGRGITQ 471

Query: 427 E---RSIARHYRESPANSILLGS 446
               R + + +R    ++IL G+
Sbjct: 472 TGMGRVVEQFHRTYKFDAILGGA 494


>gi|260222369|emb|CBA31864.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 461

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 23/221 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +++ +   +  D  Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASSLRTTALRQGD-EYVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
            +   G      FLVP      +  G    RL++K+G  S+ T ++ F N         G
Sbjct: 170 TDKAAGKKGMSAFLVPT-----NAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I    A  SV   R +L  AI YA+ R   G  + +   + 
Sbjct: 225 KEGEGYGIALGGLEGGRIGI----AAQSVGMARSALDVAIAYAKDRQSFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
             +AD A  + AA  L +  A   D  +   +EAA A++ A
Sbjct: 281 FRLADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFA 321


>gi|238062513|ref|ZP_04607222.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884324|gb|EEP73152.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 398

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 29/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEGRV 253
           ++E   G+D++AI S+  +  D  Y L G K W  +   S     L +       V G +
Sbjct: 129 MSEPECGSDVSAIRSRAVRAGDN-YVLDGQKMWLTNGAYSSVVATLVRTDTGAESVYGNM 187

Query: 254 GCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVST 306
             FL+ +  E G   +  GL      +K+G +   T E+            L G   V  
Sbjct: 188 STFLLEK--EPGFGETAPGLTIPGRIDKMGYKGVETTEMVLDGVTVPASTVLGGAEQVGR 245

Query: 307 GPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + M  I +   +      G+ +   E A+ YA++R   G  L     +   +A++  
Sbjct: 246 GFYQMMDGIEVGRVNVAARACGISIRAFELAVAYAQQRRTFGQPLAKHQAIAFKLAEMGT 305

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA AL    A   D  +    EA  A+++A     +C +    V+ EA    GG GY
Sbjct: 306 KIEAAHALMVNAARLKDAGQRNDVEAGMAKLLA---SEYCVE----VVQEAFRIHGGYGY 358

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 359 SKEYEIERLMREAP--FLLIGEGTSEI 383


>gi|148657874|ref|YP_001278079.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569984|gb|ABQ92129.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 388

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A I +   +  D  + L+G K W  +   +D  ++ A  +   G   +  
Sbjct: 125 LTEPNAGSDAAHIRTTAVRDGD-FWVLNGSKMWITNGSFADVIVVFASTDPGAGPRGITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313
            + +    G    +++ K+G R++ T  + F       SN  G       V  G    ++
Sbjct: 184 FIVEKDFPGFKVGKVEPKMGLRASHTASIFFEDCRVPASNVLG------EVGRGYALALQ 237

Query: 314 IL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            L      L +A +  +     L+  + YA  R   G  + D   ++  +AD+A+ I   
Sbjct: 238 TLDIGRCGLGAACLGAAKEAYELS--LKYAVERQQFGRPIADFQAIQFKLADMAVKIYTM 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +  A   D  ++       AR+ + I K +C      ++ EA++  GG G+  E  
Sbjct: 296 EQIVYDCAKKVDRGET-------ARLESSIVKLYCTDSLAWILDEAIQIHGGMGFSRELP 348

Query: 430 IARHYRESPANSILLGS 446
           + R YR++    I  G+
Sbjct: 349 LERMYRDARVFRIYEGT 365


>gi|83746441|ref|ZP_00943493.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|207742112|ref|YP_002258504.1| acyl coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726982|gb|EAP74108.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|206593499|emb|CAQ60426.1| acyl coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 376

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D AA+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      S  G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG 224

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AQGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +   +  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHATSLKDAGRPCLKEAAMAKLNA-------SEMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|195378841|ref|XP_002048190.1| GJ11482 [Drosophila virilis]
 gi|195404194|ref|XP_002060435.1| GJ19560 [Drosophila virilis]
 gi|194140953|gb|EDW57380.1| GJ19560 [Drosophila virilis]
 gi|194155348|gb|EDW70532.1| GJ11482 [Drosophila virilis]
          Length = 420

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +  +++ + +LA+      C     
Sbjct: 155 VTEPGAGSDVAGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 213

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 214 FTGFIVERDTP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 269

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +  + 
Sbjct: 270 GTFDKTRPPVAAGAVGLAQRCLDEALKYALERKAFGVPIAHHQAVQFMLADMAIGVETSR 329

Query: 371 ALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  +  
Sbjct: 330 -LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSDYP 381

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 382 VEKLMRDAKIYQIYEGT 398


>gi|257076081|ref|ZP_05570442.1| isovaleryl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 374

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 23/245 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           LG+TE   G+D  ++ +    +  G + L+G K F++ +P +D F++ A    R G  + 
Sbjct: 113 LGMTEPSSGSDALSMKTSAT-MDKGNFILNGSKTFITNAPYADIFLVYA----RTGENIT 167

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
           P ++E  S  G    +  +K G R + T  + F++       ++G LN   G    +   
Sbjct: 168 PFVVES-SDRGFSRGQEFDKTGMRGSPTGTIFFNDIILPENRIVGKLN---GGRNVLLSG 223

Query: 316 IYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + L+ A+++ + +   R +L  AI YA  R   G  + D  +++  +A +     ++   
Sbjct: 224 LNLERAVLAFNSIGIARRALDLAIGYASERKQFGRPISDFELVQEKLAYMYTKFESSRLF 283

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +        E +  S +AA A + A  +  +  +       EA++  GG GYI++  I R
Sbjct: 284 AMEALKRVQEDRMDSLDAASAILYASESSEYIAR-------EALQIFGGYGYIKDFEIER 336

Query: 433 HYRES 437
            +R+S
Sbjct: 337 VFRDS 341


>gi|322788010|gb|EFZ13851.1| hypothetical protein SINV_11674 [Solenopsis invicta]
          Length = 636

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 128/309 (41%), Gaps = 42/309 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ S  Y                  LTE   G+D ++I S+  K 
Sbjct: 172 ILLFGTPEQKAKYLPQVCSGTY--------------AAFCLTEPSSGSDASSIRSRAVKS 217

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQV          + ++  F+V R    G  NG
Sbjct: 218 ADGSHYILNGSKIWISNGGIANIMTVFAQVPMKDPKTGETKDKITAFIVERGF-GGVTNG 276

Query: 270 LCYQRLKNKIGNRSN---ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A     
Sbjct: 277 PPEKKMGIKCSNTAALFFEDVKIPAENVLGKEGEGFKVAMNILNNGRFGM----AAALTG 332

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            MR  + +A+++A +R   G  L +   ++  +  +++      +L++ ++ + D+    
Sbjct: 333 TMRYCINKAVNHATQRVQFGRTLDNYGTIQEKLGRMSILQYVTESLAYMISGNMDKGSQD 392

Query: 387 SE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++  A  + +W C        EA++ +GG G++ E  + R  R+     I  G
Sbjct: 393 YHLEAAISKCFASESAWWVCN-------EAIQTLGGMGFMTETGLERVMRDLRIFPIFEG 445

Query: 446 SGNAMVLDV 454
           + + + L V
Sbjct: 446 TNDILRLFV 454


>gi|297618260|ref|YP_003703419.1| Butyryl-CoA dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146097|gb|ADI02854.1| Butyryl-CoA dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
          Length = 388

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 22/272 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  +I +Q  +  D  Y L+G K F+++ P++D  ++       +G   +  
Sbjct: 128 LTEPDAGSDAGSIRTQAVRRGD-YYILNGTKSFVTNGPIADLCLVFVSTNPDMGPRGISV 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI----LI 316
            L + S  G    +  NK+G RS+ T EL FS+     +   N+     E  KI    ++
Sbjct: 187 FLVESSFPGFSRGKKLNKLGVRSSPTSELIFSDC---EVPAENLLGAEGEGFKIVAHQIL 243

Query: 317 YLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             + A  S  +  M  +L   I YAR R      + +   ++  +A++ +++ AA  + +
Sbjct: 244 EWERANFSFFLGVMDYNLQTCIKYARERIQFKRPIAEFQAIQHMLAEMKVELDAAKLMCY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A   D+          A I A   KY+  +        A++  G +G ++E  + R  
Sbjct: 304 RVAWMIDQG------MVPAPIEASSAKYFLAQALKKNADYAVQIHGANGMMKEYPLERSL 357

Query: 435 RESPANSILLGSGNAMV-LDVL--NLLEKGTN 463
           R+     I  G G   + LD++  NLL  G +
Sbjct: 358 RDYKILEI--GGGTTQIQLDIIARNLLGGGVS 387


>gi|167752786|ref|ZP_02424913.1| hypothetical protein ALIPUT_01047 [Alistipes putredinis DSM 17216]
 gi|167659855|gb|EDS03985.1| hypothetical protein ALIPUT_01047 [Alistipes putredinis DSM 17216]
          Length = 379

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD AA  +      D  Y L+G+K F++ +  +  +I++A  +   G   +
Sbjct: 123 FGLTEPNAGTDAAAQQTTAVDAGDH-YILNGNKIFITNAAYAHVYIVMAMTDKSQGTRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    + + K+G R +AT EL F N       LLG   V  G    MK  
Sbjct: 182 SAFIVERDFPGFSIGKKEKKMGIRGSATCELIFENCIVPKENLLG--KVGKGFSIAMKT- 238

Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +A     E + Y + R   G  +      +  +AD+   I AA 
Sbjct: 239 --LDGGRVGIASQALGIAQGAMDETVKYVKERKQFGRTIGQFQNTQFQLADLDTKIEAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L    A   D+    S +AA A++ A  T       A  V  +A++  GG GY  E  +
Sbjct: 297 LLVRAAAFKKDQKLPFSVDAARAKLFAAET-------AMEVTTKAVQFHGGYGYTREYPV 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 350 ERMMRDAKITEIYEGT 365


>gi|70607442|ref|YP_256312.1| multicopy acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM
           639]
 gi|68568090|gb|AAY81019.1| multicopy acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM
           639]
          Length = 390

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 33/263 (12%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           K +  + L LTE   G+D   I +  +K  D  Y ++GHK F+S    SD  I++A+   
Sbjct: 115 KGAKVLSLALTEPDVGSDSTRIKTLARKKDDRTYVINGHKIFISRLKYSDFMIVVART-- 172

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-FSNT--FGFLLGDLNVSTGP 308
                 +P  + +   +G+    +  ++   +    E++  SNT  F   L +L V   P
Sbjct: 173 ------IPYDVVERKTDGITLFLVDLRVSRDNIDMKEIKTMSNTSAFEVFLNNLEV---P 223

Query: 309 VEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
            E++          +L  L++    ++   +  AE     A+ YAR R V G  +     
Sbjct: 224 AENVIGEVNRGFYYLLDLLNAERFMIASEMIGNAEWFINKAVEYARNRVVFGKPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +  ++ A  +        FD+ K      +YA     I+KY   ++A      
Sbjct: 284 VQFPIAKVYAELEAVKSYFNDGIEHFDKDKDSKLIGSYAN----ISKYLATEIAWEAGNI 339

Query: 415 AMECIGGSGYIEERSIARHYRES 437
           AM+  GG GY  +  I R  RE+
Sbjct: 340 AMDTYGGYGYAVDTGIERKLRET 362


>gi|2492632|sp|Q60759|GCDH_MOUSE RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|1439521|gb|AAB04679.1| glutaryl-CoA dehydrogenase precursor [Mus musculus]
          Length = 438

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + ++ +   S+  Y LSG K W  +SP++D FI+ A+ E       
Sbjct: 177 FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNC---- 232

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
           +P  + +    G    R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 233 IPGFILEKGMRGSSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 288

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 289 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 347 LHACLQLGRLKDQDKATPE-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYH 399

Query: 430 IARH 433
           + RH
Sbjct: 400 VIRH 403


>gi|319793062|ref|YP_004154702.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315595525|gb|ADU36591.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 384

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 27/275 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCF 256
           LTE   G+D  ++ ++ + +    Y ++G K F+S   S D  +++A+  G     +  F
Sbjct: 124 LTEPGAGSDAGSLKTRAE-LQGAEYVINGGKAFISGAGSTDVLVLMARTGGAGASGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VP         G+ Y + ++K+G  S  T  + F N     +   N+     E  +I +
Sbjct: 183 AVP-----ADAPGVSYGKKEHKMGWNSQPTRTINFDNV---RIPAENLLGKEGEGFRIAM 234

Query: 317 Y-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAAT 370
             LD   ++++   V  A+    A RR++       +P+     ++  +AD+A ++ AA 
Sbjct: 235 KGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPIASFQALQFKLADMATELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +    A+  D         A A     + K +       V  +A++  GG GY+ E  +
Sbjct: 295 QMVRLAASKLDAGH------ADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPL 348

Query: 431 ARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
            R  R++  + IL G+   M V+    LLE  +++
Sbjct: 349 ERLVRDTRVHQILEGTNEIMRVIVARKLLEGDSDI 383


>gi|195584840|ref|XP_002082212.1| GD11444 [Drosophila simulans]
 gi|194194221|gb|EDX07797.1| GD11444 [Drosophila simulans]
          Length = 627

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 267

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 268 PPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 324

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 325 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG GY+ +  + R  R+     I  G
Sbjct: 384 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGYMVDTGLERVLRDLRIFRIFEG 436

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 437 TNDILRL 443


>gi|149927468|ref|ZP_01915722.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149823741|gb|EDM82967.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 26/273 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P   +   IG + ++E   G+D+  I +    + DG  Y ++G K F+S+  ++D  I++
Sbjct: 106 PKMASGEMIGAIAMSEPGAGSDLQGIRTSA--VKDGNHYVVNGSKIFISNGYLADVIILV 163

Query: 247 AQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            + +   G  G  L+  LLE     G    R+  K+G +   T EL F N     +   N
Sbjct: 164 TKTDPSAGAKGTTLL--LLETKKAEGFKVGRILEKLGQKGQDTCELFFDNV---RIPTQN 218

Query: 304 V----STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V      G ++ M  L Y  L   + +++ + +++   + Y + R   G  + +    + 
Sbjct: 219 VLGAEGMGFMQLMVELPYERLMLGVGAMAAIEMAIEITLEYTKERKAFGKSIFEFQNTRF 278

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++      A A    + NS ++  +   +AA     A I K    ++   VI E ++
Sbjct: 279 KMAELKSQAVVARAF---IDNSIEKLVAGKLDAA----TASIAKLHLSELECKVIDECLQ 331

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IA+ Y ++    I  GS   M
Sbjct: 332 FFGGYGYMMEYPIAQMYADARVQRIYGGSSEIM 364


>gi|157871974|ref|XP_001684536.1| acyl-coa dehydrogenase [Leishmania major strain Friedlin]
 gi|68127605|emb|CAJ05708.1| putative acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
          Length = 629

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 157/373 (42%), Gaps = 75/373 (20%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +MA    G  M   ++  +   LM   +  + + + PK+ S E+  T             
Sbjct: 144 MMATANWGFSMYSGLSLGACRTLMAWASDELKEQYLPKLVSGEWSGT------------- 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253
           + LTE + GTD++ + ++ +   +G  Y ++G K F+S+    ++D  I  +LA++   +
Sbjct: 191 MCLTEPQCGTDLSQVRTKAEPSGNGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSL 250

Query: 254 ------GCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   FLVPR +  +DGS     N  C   L+ K+G + ++T +L F N+ G+L+G+
Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEAAKNVECIA-LEKKMGIKGSSTCQLSFHNSVGYLIGE 309

Query: 302 LNVSTGPVEDMK-ILIYLDS-----AIMSVSGMRVSLAEAIHYARRRH------------ 343
                 P   MK +  ++++     A+  V    ++    + YAR R             
Sbjct: 310 ------PSAGMKQMFTFMNAARVGCALEGVCHAELAFQNGLRYARERRSMRALGGTKEPE 363

Query: 344 -VSGGIL----IDQPVM-KRAIAD----IALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            V+  I+    + Q V+  +AIA+    + LD+     L     ++        E   Y 
Sbjct: 364 MVADRIIYHANVRQNVLFAKAIAEGGRALLLDVGRLMDLHAAAPDAATADALDHEIGFYT 423

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            I       W  + A  +    ++  GG GYI+   + +  R+S   ++  G+     LD
Sbjct: 424 PIAKACVTEWGVEAASRL----LQVWGGHGYIKGNGMEQILRDSRIGTLYEGTTGVQALD 479

Query: 454 VLN---LLEKGTN 463
            +    L  KG N
Sbjct: 480 FIGRKVLSTKGGN 492


>gi|68536565|ref|YP_251270.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577708|ref|ZP_05845643.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264164|emb|CAI37652.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604103|gb|EEW17345.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 387

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 31/371 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+  E H        ++   GL C+     +       AH+    +   +A   A
Sbjct: 32  PNELKWE--ENHQVEREFWNKAGDAGLLCASIPEEYGGGGGTFAHEAVIQQELALAGNSA 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            H    SV  A  +  + T    K W P + S E             +   + +TE   G
Sbjct: 90  WHNGVHSVIVAHYIYQLGTEEQRKRWLPGMASGE-------------LVGAIAMTEPGTG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGS 266
           +D+ AI ++ +   D  + ++G K F+++    D  +++A+   + G   +  ++ E   
Sbjct: 137 SDLQAIKTRAELDGDE-WVINGSKTFITNGTHCDVVVIVARTNDQPGGRGLSLIVAETQD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSA 321
             G    R+ +KIG R   T EL F++       LLG      G V+ M+ L    L  A
Sbjct: 196 LEGFERGRVLDKIGQRGQDTRELFFTDMRVPADNLLGGQE-GMGFVQLMQQLPQERLILA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I   S    ++ E I Y   R   G  ++     +  +A+ A +  AA  L+        
Sbjct: 255 IGGSSACEGAVRETIRYVNEREAFGRPILGFQNTQFVLAECASETLAAKTLTDHCTALHI 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K  + +A+ A       KY    +  +V    ++  GG G++ E  I+R Y ++    
Sbjct: 315 EGKLTTAQASAA-------KYLASDLQSSVADRCLQLFGGYGFMREYPISRMYTDARVQR 367

Query: 442 ILLGSGNAMVL 452
           I  G+   M L
Sbjct: 368 IYGGTNEIMKL 378


>gi|84501959|ref|ZP_01000117.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389954|gb|EAQ02588.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 385

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 49/296 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           K W PK+ S +             VA  + +TE   G+D+  + +  +K  DG  Y ++G
Sbjct: 112 KKWLPKLVSGD------------RVA-AIAMTEPGTGSDLQNVQTHAEK--DGNHYRING 156

Query: 231 HKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++   +D  I++A+ +   G  G  L+  +LE     G    R   K+G + + T
Sbjct: 157 SKNFITNGHTADLVIVVAKTDRGAGAKGVSLI--VLETEDAEGFRRGRNLKKLGMKGSDT 214

Query: 287 VELEFSNTFGFLLGDLNVST----GPVED------MKILIY--LDSAIMSVSGMRVSLAE 334
            EL F         D+ V T    GP E       MK L +  L   I ++  +  ++AE
Sbjct: 215 AELFFE--------DVRVPTANLLGPEEGQGFYQLMKQLPWERLMIGITALGFIDFAIAE 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y + R   G  ++D         +    +A     +  L +  ++  +R E      
Sbjct: 267 TVKYVQDRKAFGSRIMD-------FQNTRFKLAECKTKAELLRSFVNDGIARLEAGELDA 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + K+W  +    V+ E ++  GG G++ E  IAR Y +S    I  G+   M
Sbjct: 320 ATASMAKWWGSQTQNEVMHECLQLHGGYGFMMEYPIARLYADSRVQMIYGGTNEIM 375


>gi|317505930|ref|ZP_07963763.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255776|gb|EFV15013.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  +   D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTSARLDGD-HYVINGAKTYITSGVRADYVVTAARTGGEGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            ++ D    G    R  +K+G R + T EL + +       L+G  N     +    +  
Sbjct: 183 LIVVDKQTPGFTVSRKLDKLGWRCSDTAELSYVDVRVPARNLVGAENSGFAQIASAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  + +  +  L     + R R+  G  LI +  ++  +A++A  I  A   + R 
Sbjct: 243 RVNLAGQAYASAQRCLDITAQWCRDRNTFGRPLISRQGVQNTLAEMARRIDVARVYT-RH 301

Query: 377 ANSFDEAKSRS--EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               + A  R    +  +A+  A  T  W       V  +A++  GG GY+ E  + R Y
Sbjct: 302 VVEREIAGDRDLVAQVCFAKNTAVETGEW-------VANQAVQLFGGLGYMAESEVERQY 354

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R+     + +G G   +L  L
Sbjct: 355 RD--MRILGIGGGTTEILTTL 373


>gi|311772310|pdb|3PFD|A Chain A, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772311|pdb|3PFD|B Chain B, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772312|pdb|3PFD|C Chain C, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772313|pdb|3PFD|D Chain D, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E+  G+D A++ ++   ++DG  + L+G K W  +   S  + ++A  +   G   + 
Sbjct: 138 LSEREAGSDAASMRTRA--VADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGIS 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             +      G      + K+G + + T EL F N    + GD  +          L  LD
Sbjct: 196 AFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLD 253

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ I AA  + +
Sbjct: 254 HTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVY 313

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A     A++   E     I A  +K +   +A  V  +A++  GG GY ++  + R  
Sbjct: 314 SAA-----ARAERGEGDLGFISA-ASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMM 367

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 368 RDAKITQIYEGT 379


>gi|307727405|ref|YP_003910618.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587930|gb|ADN61327.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 113/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   +  E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGT--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|258510163|ref|YP_003183597.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476889|gb|ACV57208.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 404

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 33/274 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE---GRVG--C 255
           LTE   G+D++ I +  +K+ DG Y L+GHK ++++    ++++  A V+   GR G   
Sbjct: 139 LTEPGAGSDVSGIRTSAKKV-DGGYVLNGHKVYITNGGRASWVVAFATVDPSLGRAGHRA 197

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVST--GPV 309
           F+V    E G+P   C  R+ +K+G R++ T EL F + F      L G+ +     G  
Sbjct: 198 FVV----EKGTPGFTC-TRVAHKMGLRASETAELVFEDCFVPIDNLLGGEAHYENRAGSS 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +   DS    V+ M V +A A     + + ++ +  G  +    + K  + ++  
Sbjct: 253 GFRVAMSTFDSTRPIVAAMAVGIARAAYEYTLEFVKQEYPRGQRVRHDVLAK--LGEMDA 310

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L++  A   D  +  ++EAA  +  A       C    A   E M  IG  G+
Sbjct: 311 KIHAARLLTWEAAWKADLGQPNAKEAAMCKAHAGRVSLEVC----ADCLEIMGPIGLDGH 366

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + E+     YR+     I  G+     L V   L
Sbjct: 367 LVEKL----YRDVKVFDIFEGTNQIQHLIVARRL 396


>gi|221128011|ref|XP_002154177.1| PREDICTED: similar to acyl-coa dehydrogenase, partial [Hydra
           magnipapillata]
          Length = 327

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 23/221 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +++ +   +  D  Y ++G K F++S  + D  I++A 
Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASSLRTTALRQGD-EYVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
            +   G      FLVP      +  G    RL++K+G  S+ T ++ F N         G
Sbjct: 170 TDKAAGKKGMSAFLVPT-----NAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIG 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++ G +E  +I I    A  SV   R +L  AI YA+ R   G  + +   + 
Sbjct: 225 KEGEGYGIALGGLEGGRIGI----AAQSVGMARSALDVAIAYAKDRQSFGQPIFNHQAVG 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
             +AD A  + AA  L +  A   D  +   +EAA A++ A
Sbjct: 281 FRLADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFA 321


>gi|169628951|ref|YP_001702600.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240918|emb|CAM61946.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           W P I S +             + + + +TE   G+D+ A+ +    I DG  Y ++G K
Sbjct: 117 WMPGIISGD-------------LVLAIAMTEPGTGSDLQAVRTTA--IPDGDHYVINGSK 161

Query: 233 WFLSSPMS-DAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            F+S+    D  +++A+    +G  G  L+  + E     G    R+  K+G     T E
Sbjct: 162 TFISNGTHCDLLVIVAKTDPSQGAAGVSLI--VAETKDLPGFERGRVLEKVGQHGQDTRE 219

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-SGM-RVSLAEAIHYARRRH 343
           L F++        LGD +   G  + M+ L      I +V SGM   +L EAI Y + R 
Sbjct: 220 LFFTDMRVPIANRLGDKD-GLGFYQLMEQLARERLIIAAVCSGMAEGALIEAIKYTKERE 278

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI     K  +A++  ++ +           +    +    A+ A+++A      
Sbjct: 279 AFGKPLIKFQNTKFQLAELKAEVLSIKTTVDYCVQDYINGNNDPATASMAKLIA------ 332

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               A +V+   ++  GG GY+ E  IAR Y  +  N I  G+   M
Sbjct: 333 -ADKAVSVVDRCVQFFGGYGYMMEYPIARAYAAARVNKIYGGTSEIM 378


>gi|126343455|ref|XP_001381234.1| PREDICTED: hypothetical protein, partial [Monodelphis domestica]
          Length = 633

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 30/266 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA----------QV 249
           LTE  GG++  +I +  +    G  Y L+G K W  +  +++ F + A          +V
Sbjct: 314 LTESTGGSNTDSIMTTAEVSECGKFYTLNGRKIWISNGGIAEIFTVFAKTQVKDMTTGEV 373

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
            G++  F+V +        G+     + K+G +++ T E+ F+N       LLGD     
Sbjct: 374 HGKISAFIVEKDF-----GGVTSGPPQKKMGIKASNTTEVHFNNVRVPAENLLGDFG--D 426

Query: 307 GPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M IL     A++   V  +R  + +A ++A  R  SG  + +  ++++ +A + +
Sbjct: 427 GYKIAMNILNSGRFAVVCALVGTIRKLIIKATNFAATREQSGTCISNHGIIQKKLARMVM 486

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
                 ++++ ++ + D+  S         +   I K +  + A  VI E ++ +GG GY
Sbjct: 487 YHYVTESMAYMISGNLDKHVSD------LHLEVAICKIFASEAAWEVIDECIQVLGGIGY 540

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++   + +  R+     IL G+ + +
Sbjct: 541 MKAGGVEQIMRDLRIFRILQGTNDVL 566


>gi|187479491|ref|YP_787516.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424078|emb|CAJ50631.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 385

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 27/272 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    +   D  Y L G K W  +  ++D + + A+     G   +
Sbjct: 129 FALSEIDAGSDVAAMCCAARLDGDS-YVLDGEKTWISNGGIADFYCVFARTGEAPGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI- 314
              + D    GL      + I     AT  L+F N        LG+      P +  K+ 
Sbjct: 188 SAFVVDADTPGLTISGRIDLIAPHPLAT--LQFDNCRIPATQRLGE------PGQGFKLA 239

Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD    SV+       R +L E +  AR R + G  L D  + + A+ D+A  I ++
Sbjct: 240 MMTLDIFRASVAAAALGFARRALDEGLGRARSRRMFGQTLADLQLTQAALGDMACAIDSS 299

Query: 370 TALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++R A   D   +R+  EAA A++ A        + A  VI  A++  GG+G +  +
Sbjct: 300 ALLTYRAAWLRDVKGARTTREAAMAKMAAT-------ESAQQVIDRALQMFGGAGVMSGQ 352

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            I + YRE  A  I  G+     L +   L K
Sbjct: 353 PIEKLYREIRALRIYEGATEVQKLIIARELLK 384


>gi|88706159|ref|ZP_01103866.1| Acyl-CoA dehydrogenase, short-chain specific [Congregibacter
           litoralis KT71]
 gi|88699553|gb|EAQ96665.1| Acyl-CoA dehydrogenase, short-chain specific [Congregibacter
           litoralis KT71]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 27/258 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           I LG++E   G+D+AA+ ++  +  D  + ++G K W  +   SD  I       R G  
Sbjct: 124 IALGISEPDVGSDVAAVKTRAVREGDH-WVINGEKTWITNGEYSDLLICTC----RTGDN 178

Query: 257 LVPRLLEDGSPNGLCYQRLKN-KIGNRSNAT-----VELEFSNTFGFLLGDLNVSTGPVE 310
            +  +L D   +G     +K   +  +S A      V +  SNT G          G   
Sbjct: 179 EISHILIDREEHGYDVMGIKKLALNGQSTAQIFLSDVRVPVSNTLG------EQGQGLKN 232

Query: 311 DMKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK+  Y     A+  V+  R +L E+I Y++ R   G  +    ++   +A +A  + A
Sbjct: 233 TMKLFEYARCHMAMWGVATARRALDESIKYSQERSQHGKPIAGHQLIADKLATMATQVDA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R     +      +E + A       K++  ++A     +A++  GG+G  +E 
Sbjct: 293 ARLLAYRAITLVESGIRADKECSMA-------KWYGTEIAVNATRDAVQIHGGNGVTKEF 345

Query: 429 SIARHYRESPANSILLGS 446
            + R  RE+  + I  G+
Sbjct: 346 VVERLAREALISPIPDGT 363


>gi|239820862|ref|YP_002948047.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239805715|gb|ACS22781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 390

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 38/253 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254
           LTE   G+D  ++ +  ++  D  Y L+G K F++ +P++  F ++A+ +        V 
Sbjct: 124 LTEPEAGSDAVSLRTSARREGDH-YVLNGTKCFITNAPIAGLFTVMARTDPDDLSARGVT 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTG 307
            FLV R    G P GL       K+G   +   E+  +       N  G   G      G
Sbjct: 183 AFLVER----GMP-GLSTGPAYRKMGQAGSPVSEVHMNDCIVPAENVIGGCEGQ-----G 232

Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               MK+L    I+L +A+     +R+ L +A+ +   R   G  L    +++  IAD  
Sbjct: 233 FKTAMKVLNKQRIHL-AALCIGPAIRM-LQDAVAFVSTRKQFGQALSGFQLIQALIADSQ 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA AL    A   DE    + EA+       I KY+  +M   V   +++ +GG G
Sbjct: 291 TEIHAARALVLDTARKRDEGIDVTMEAS-------ICKYFASEMCGRVADRSVQMLGGYG 343

Query: 424 YIEERSIARHYRE 436
           YI +  + R YR+
Sbjct: 344 YIADHGMERFYRD 356


>gi|254466955|ref|ZP_05080366.1| short-chain specific acyl-CoA dehydrogenase [Rhodobacterales
           bacterium Y4I]
 gi|206687863|gb|EDZ48345.1| short-chain specific acyl-CoA dehydrogenase [Rhodobacterales
           bacterium Y4I]
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 52/304 (17%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQK 220
           ++L  TP    +W P              + +   A+    LTE + G+D+A  T     
Sbjct: 100 ISLFGTPEQQAEWLP--------------LTRAGKAVSAFALTEPQSGSDVANSTMTATL 145

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQR 274
             D  Y L+G K W  +  ++D + + A+     G      F+VP     G P     +R
Sbjct: 146 DGD-HYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFVVPA----GLPGFEVVER 200

Query: 275 LKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI-YLD-----SAIMSV 325
            +  I     AT  L F+        LLG       P +  KI +  LD      A  ++
Sbjct: 201 -QQVIAPHPLAT--LRFTGCRIPKSALLGQ------PGQGFKIAMSVLDVFRSTVAAAAL 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA+     R V G  L +  +++  IAD+ALD+ A+  L +R A + D   +
Sbjct: 252 GFARRALDEALARVSERQVQGAPLFELQMVQGHIADMALDVDASALLVYRAAWAKDSGAA 311

Query: 386 R-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           R + EAA A       K +    A  VI +A++  GG G    + +   YR+  A  I  
Sbjct: 312 RVTREAAMA-------KLFSTDQAQQVIDKAVQLHGGDGVRRGQKVEELYRDIRALRIYE 364

Query: 445 GSGN 448
           G+ +
Sbjct: 365 GASD 368


>gi|319652073|ref|ZP_08006193.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317396221|gb|EFV76939.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 381

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 36/273 (13%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +   + +TE   G+D+A I +  +   D  Y ++G K F+++ +    I++A    +  
Sbjct: 118 EIITAIAMTEPGAGSDLAGIRTTARLEGDH-YIVNGEKTFITNGIHSDLIIIA---CKTN 173

Query: 255 CFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              VPR      L  +    G    R  NK+G     T EL F         D  V    
Sbjct: 174 PNAVPRHKGVSLLAVERETKGFTRGRKLNKVGLHCQDTAELIFE--------DCKVPKEN 225

Query: 309 V--EDMKILIYLDSAIMS---------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +  E+ K  +YL   +                  L   ++Y + R   G  +      + 
Sbjct: 226 LIGEEGKGFLYLMEKLQQERLVVAIAAQVAAEEMLNLTMNYVKNREAFGRPVSQFQNTQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++A DI    +   +L       K    + + A       K+   + A  + AE M+
Sbjct: 286 KIAEMATDIEMGRSFLDQLITEHMAGKDVVTKVSMA-------KWKLTENARNIAAECMQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+EE  IAR YR+ P  SI  G+   M
Sbjct: 339 LHGGYGYMEEYEIARRYRDIPVASIYAGTNEIM 371


>gi|218288745|ref|ZP_03493008.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241103|gb|EED08279.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 198 IGLGLTEKRGGT--DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG 254
           +   LTE   GT  D+  I +      +G + L+G K  ++     A I ++A++EG  G
Sbjct: 137 VAFALTEPDNGTGIDLRTIAT----YENGKFVLNGRKHLITFAEEAAVIAVIAKMEGGAG 192

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
                 FLVP+        G+    + + +G++  +   +EF N       +LG++    
Sbjct: 193 RTGLTAFLVPQ-----GRKGMKLTPMPHMMGDKGCSHAVIEFENCEVGEDEVLGEIGEGF 247

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           G    + +  +LD +   ++   V LA+     A+ + RRR   G  L  +  ++  +A+
Sbjct: 248 G----VAVRGFLDQSRACIAQSAVGLAQEALDRALDHVRRRTTFGKALASRQAVQMRLAE 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + I  A  L    A  +D+ +  S EAA A+  A        +M   V   A+   GG
Sbjct: 304 MQIAIQGARLLCLDAAYKYDQGRDISLEAAIAKANA-------IRMVGEVTDGALSLYGG 356

Query: 422 SGYIEERSIARHYRES 437
            GY     + R YR++
Sbjct: 357 IGYAVTSPVERLYRDA 372


>gi|195998429|ref|XP_002109083.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190589859|gb|EDV29881.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 392

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG-- 254
           L+E+  G+D  A   Q + + DG  Y ++G K W  ++ ++    ++A     +G  G  
Sbjct: 135 LSEQGSGSD--AFAMQTRAVRDGNDYVINGTKLWITNADIAGLMFVMANAAPDQGYKGIT 192

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307
           CF+V     D S  G+   + + K+G  + A   + F       SN  G +     ++  
Sbjct: 193 CFIV-----DASTPGVTVSQREKKLGQHAAANCPVIFEDVRVPASNVIGGIGLGYKIAAS 247

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + + +I I    A M  +   V +   + Y   R   G  L D   M+  IA+    I 
Sbjct: 248 MLNEGRIGI---GAQMLGASQGV-MDYVVPYTMERKQFGKRLFDFQAMQHQIAEACTKIE 303

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A   D  K  ++EAA       I KY+  ++A  V    ++ +G  GY+++
Sbjct: 304 AARLLVYNAARLKDSNKPYAKEAA-------IAKYYSTELAVQVGLSGIKWLGALGYMKD 356

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             + +  R+S    I  G+ N M+  +   ++
Sbjct: 357 APVEKLLRDSIPGVIYEGTSNIMLNTIAKFVQ 388


>gi|188590905|ref|YP_001795505.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|170937799|emb|CAP62783.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 7/251 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + Q   D  Y L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAQLKGD-RYVLNGTKMWITNGPDCDVLVVYAKTEPELGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F +    +   L    G  + +   +  
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPVENILGAENGGAKVLMSGLDY 247

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           + A++S   V  M+  +     Y   R   G  + +  +++  +AD+   + AA +  + 
Sbjct: 248 ERAVLSGGPVGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + D   S           A I   +  + A  +  E ++ +GG+GYI E    R +R
Sbjct: 308 VGKNLDALGSDHVRQVRKDCAAVI--LYTAEKATWMAGETVQILGGNGYINEYPAGRLWR 365

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 366 DAKLYEIGAGT 376


>gi|87199246|ref|YP_496503.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134927|gb|ABD25669.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 394

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 131/315 (41%), Gaps = 43/315 (13%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + S +    TP    +W P+I S E             +A   GLTE   G+D AA+ + 
Sbjct: 98  TGSAIKNFGTPEQKAEWLPRIASGE-------------IAC-FGLTEPGSGSDSAAMQTM 143

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNG 269
             +  +G Y L+G K +++ SP +   +++A+           V  F+V     D +  G
Sbjct: 144 AVRDGNG-YRLNGTKRYITNSPSAKIGLIMARTSKEALPRNAHVSAFIV-----DMTAPG 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
           +   +   K+G       ++   +    + G   V        +I +  LD+  +SV+GM
Sbjct: 198 ISIGKPDKKMGQSGAQIADVIMEDVH--VPGSALVGGEEGRGFQIAMQSLDNGRLSVAGM 255

Query: 329 -----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R +L  AI YA  R   G  + +  +++  +AD   ++ AA  +        D  
Sbjct: 256 GVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYAAECMIADACARADRG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +S   +AA A++    +   C +    V+   ++  GG+GY+ E    R +R++    I 
Sbjct: 316 ESVQRKAAAAKLF---SSEACGR----VVDRCVQVYGGAGYLAEYPAERFFRDARILRIY 368

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M L +   L
Sbjct: 369 EGTSQIMQLQIAKHL 383


>gi|328949580|ref|YP_004366915.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328449904|gb|AEB10805.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 378

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AAI ++ +   DG Y L+G K W  ++P++D F++ A+ +   G   +  
Sbjct: 122 LTEPHAGSDAAAIRTRARPTPDG-YVLTGRKTWISNAPVADFFVVFAKTDPEAGHAGISA 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI- 316
            L D    G+       K+G R+    E+   E S +   LLG         E  K+ + 
Sbjct: 181 FLVDREQPGVRVGPPLAKLGQRAAPAAEVVFDEVSLSREALLGREG------EGFKLAMR 234

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             D +   V+   V LA     EA+ YA +R   G  +     +   +A++ +   AA  
Sbjct: 235 VFDHSRPMVAAFAVGLAQRALDEALRYATQRTAFGQPIARFQGVGFKLAEMGMHTQAARL 294

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A   D+ +  + EAA         K +    A     EA++  GG GY  E  + 
Sbjct: 295 LTYHAAWKADQGQPNTLEAA-------YAKAFAADHAMQAALEAVQIHGGYGYSPEYPVE 347

Query: 432 RHYRESPANSILLGS 446
           +  R++    I  G+
Sbjct: 348 KLMRDAKLLQIYEGT 362


>gi|323497121|ref|ZP_08102141.1| isovaleryl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326]
 gi|323317696|gb|EGA70687.1| isovaleryl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326]
          Length = 389

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 125/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + + +    Y L+G K W  + P +D  I+ A+ +  V    +
Sbjct: 130 LAMSEPNAGSDVVSMQLKAE-LHGNYYHLNGSKMWITNGPDADVVIVYAKTDPSVKSHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  + +  +K+G R + T EL F +     +   N+       +++L+  
Sbjct: 189 SAFIVEKQFEGFSHAQKLDKLGMRGSNTCELVFKDC---KVPKQNLLGAENHGVQVLMSG 245

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++G     M+  L   + Y   R   G  + +  +++  IAD+     AA   
Sbjct: 246 LDYERVVLAGGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKIADMYTRTNAARCY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A +       +  ++A  +  +A++ +GG+GYI E    R
Sbjct: 306 VYTVAAACDRGEATRKDAAGAIL-------YSAELATQLALDAIQLLGGNGYINEFPAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LF++
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFDE 387


>gi|288555723|ref|YP_003427658.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           pseudofirmus OF4]
 gi|288546883|gb|ADC50766.1| acyl-CoA dehydrogenase domain protein [Bacillus pseudofirmus OF4]
          Length = 587

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 40/286 (13%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D +AA T+         Y L+G K ++++ + SD FI+ A+V G +   F++
Sbjct: 149 LTEPSSGSDALAAKTTAVLSQEKTHYILNGTKLYITNAVFSDTFIVYAKVNGDQFTAFIL 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            +  +     GL     + K+G + ++T        E+   N  G       V  G V  
Sbjct: 209 EKDFK-----GLTLGPEEQKMGIKGSSTRSVILEDCEVPVENVLG------EVGKGHVIA 257

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +L      L SA M  +  + +L  AI +   R      + +  + K  +A +A  I 
Sbjct: 258 FNVLNLGRFNLGSACMGAA--KGALKLAIEHTNERKQFKKRISEFGITKEKVALMAARIF 315

Query: 368 AATALSFRLAN-------SFDEAKSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAM 416
           AA +L +R A+         D+  S  E       YA +   I K +  +    V+ E++
Sbjct: 316 AAESLQYRTADLLEGALGEIDDTHSVGEVGKRMMEYA-LECAICKVYGSETLDYVVDESL 374

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKG 461
           +  GG+G+I+E  I + YR+S  N I  G+     L V  L L+KG
Sbjct: 375 QLHGGAGFIKEYPIEQMYRDSRINRIFEGTNEINRLLVPGLFLKKG 420


>gi|332305952|ref|YP_004433803.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173281|gb|AEE22535.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 391

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 30/256 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGR 252
           G+ LTE   GTD+ AI +   K  D  Y ++G K W  +S   ++  +L +     V   
Sbjct: 122 GVALTEPNAGTDLQAIRTTAVKDGDE-YIINGAKTWITNSLNGNSLAVLVKTDLDAVPAH 180

Query: 253 VGCFLVPRLLEDGSPN---GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS- 305
            G  +     +D   N   G+   ++  K+G RS  T E+ F N       L+G+   S 
Sbjct: 181 KGTSMFIVETKDAQGNFKPGITVSKM-TKLGYRSIDTCEVVFENVRVPAANLVGEKEGSG 239

Query: 306 ----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G +E  +I +    A ++     +    A+ YA+ R   G  +     ++  + +
Sbjct: 240 FKHAIGGLELGRINVAARGAGIAQGSTEL----AVRYAQERETFGKAICQHQAIQLKLGE 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L  + A  +D  +    EA  A+        +C         EAM   GG
Sbjct: 296 MATQVEAARLLIEQAATKYDANERCDMEAGMAKYFGSEAGVFCAN-------EAMRIFGG 348

Query: 422 SGYIEERSIARHYRES 437
             Y  E  I R+YR++
Sbjct: 349 YSYSVEYDIERYYRDA 364


>gi|300692755|ref|YP_003753750.1| acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum PSI07]
 gi|299079815|emb|CBJ52492.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum PSI07]
          Length = 376

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ + ++     LTE   G+D +A+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGAMLGAFCLTEPHVGSDASALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +       +  FLVP      S  G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKAAAKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLG 224

Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 AEGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNAS-------EMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|228901617|ref|ZP_04065795.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis IBL 4222]
 gi|228858029|gb|EEN02511.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis IBL 4222]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLLLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + R +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYRPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|219119059|ref|XP_002180296.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408553|gb|EEC48487.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 434

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/282 (19%), Positives = 116/282 (41%), Gaps = 29/282 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P   T       L+E   G+D  A+ +     S   Y L+G K W  ++  +  F++ A 
Sbjct: 164 PRLATDTVSSFCLSEAESGSDAFALKTTAIPTSSSEYVLNGTKLWISNAAQAGVFLVFAN 223

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + D    G+     ++K+G R+++T  + F         D+ V+T  
Sbjct: 224 ANPAAGYKGITAFMVDAKTEGISVGPPESKLGLRASSTCPITFD--------DVKVTTDD 275

Query: 309 VEDMKILIY------LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
           +     + Y      L+   + ++  ++ +A+      + Y + R   G  + D   ++ 
Sbjct: 276 ILGQVGMGYKYCINILNEGRIGIACQQIGIAKGCLDIVMPYLKERQQFGRAIADFQGVQF 335

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAM 416
            +A  A ++ AA  +++           R +EA    +  A + K +  K++  V +  +
Sbjct: 336 QVAMAATELHAAEVMTYN--------ACRLKEANLPFVKEASMAKLYSSKVSEKVASLTI 387

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E +GG G+ ++    + YR+    SI  G+ N  +  +  LL
Sbjct: 388 ELLGGIGFTQDLLAEKFYRDCKVGSIYEGTSNMQLQTIAKLL 429


>gi|171317350|ref|ZP_02906545.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097491|gb|EDT42330.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|218532519|ref|YP_002423335.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|254563597|ref|YP_003070692.1| short-chain specific acyl-CoA dehydrogenase [Methylobacterium
           extorquens DM4]
 gi|218524822|gb|ACK85407.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|254270875|emb|CAX26880.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens DM4]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 57/299 (19%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           D + +A + K++    +G   L+E   G+D+A + ++  +  D        +W   +  +
Sbjct: 115 DESRRALLAKSAKGQWIGSIALSEPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGA 174

Query: 241 DAFIMLAQV------EGR---VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
           D   +LA+V      E R   +  FLV  + E G+ P G+    + +KIG     T EL+
Sbjct: 175 DFIEVLARVRDPEPGEPRSAGLEPFLV--VKEPGTFPKGMTGTVI-DKIGYHGFLTFELK 231

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340
                      L+    P  D    +Y D    + SG   S+   ++ AR          
Sbjct: 232 -----------LDGVRVPERDRLTGLYGDEGADADSGGFASVQRGLNIARVHTAARAVGV 280

Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                         R   G  +     ++ A+AD+A ++A A A   ++A+  DE     
Sbjct: 281 ARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAAEVAQARAYWQQVAHLLDEGLPAE 340

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+A  +++A        +MA  V  +AM+  GG+GY  ER + R++R++   +I  G+
Sbjct: 341 SESAQVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGT 392


>gi|218779015|ref|YP_002430333.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760399|gb|ACL02865.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 28/277 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   T   IG L LTE   GTD  ++ +   +  D  Y L+G K F+S +P++D F+  A
Sbjct: 114 PGMATGERIGALALTEPEAGTDATSLATTAVRDGD-YYILNGSKTFISNAPIADVFVTYA 172

Query: 248 QVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            ++     G +  F+V R     +P   C   ++   G +S  T E+ F++       LL
Sbjct: 173 TMDISKRAGGITGFIVER----DTPGLTCGPPMRKHFG-KSTPTGEMFFNDAKIPAENLL 227

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           G      G    +  L +   A   + G M   L   I YA+ R   G  +    +++  
Sbjct: 228 G--KEGEGFTAMIASLGWERLAFAPIVGLMEAELDLCIDYAKTRKQFGKPVGKFQLVQAM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ +D+ A+  L+  LA        + ++  Y  I A I K +  + A     +A++ 
Sbjct: 286 LAEMKMDLEASRYLALSLA-------WKKDQGIYNPIDAAIAKTFITEAAERNSRKAVQI 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            GG G ++E    R++    A +  +G G + +  VL
Sbjct: 339 HGGMGCMQECKAGRNFWS--AKTAAIGGGTSQIQRVL 373


>gi|115655543|ref|XP_794484.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 273

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 25/281 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
           L ++E   G+D+ ++  + ++  D  Y L+G K W  + P +D  ++ A+    VE   G
Sbjct: 10  LAMSESGSGSDVVSMKLKAER-KDDHYLLNGSKFWITNGPDADVLVVYAKTDLGVEPSQG 68

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             +   L+E G       Q+L +K+G R + T EL F +       ++G LN     +  
Sbjct: 69  --ITTFLIEKGMDGFSTAQKL-DKLGMRGSNTCELVFEDCKVPVENVMGSLNKGVYVLMS 125

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  L  A   +  M+ +   A  Y  +R   G  + +  +M+  +AD+   + +  +
Sbjct: 126 GLDLERLVLAAGPIGLMQAACDVAFPYLHQRKQFGRPIGEFQLMQGKMADMFTRLNSIRS 185

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D     + + A   ++A  T    C        +A++C+GG+GYI +    
Sbjct: 186 YVYNVARAADRGHVSARDCAGVILVAAETATQVC-------LDAIQCLGGNGYINDYPTG 238

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           R  R++    I  G+G + V  ++     G +  E+  STL
Sbjct: 239 RLLRDAKLYEI--GAGTSEVRRLI----IGRSFNEEFKSTL 273


>gi|78061275|ref|YP_371183.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77969160|gb|ABB10539.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 414

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 150 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGI 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 209 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 265

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S      M   L   + Y   R   G  + +  +++  +AD+     A  A 
Sbjct: 266 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 325

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 326 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 383

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 384 LWRDAKLYEIGAGT 397


>gi|54400550|ref|NP_001006024.1| glutaryl-Coenzyme A dehydrogenase, like [Danio rerio]
 gi|53734644|gb|AAH83397.1| Glutaryl-Coenzyme A dehydrogenase, like [Danio rerio]
 gi|182891166|gb|AAI64011.1| Gcdhl protein [Danio rerio]
          Length = 427

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D  ++ ++ +   S   + L+G K W  +SP++D  ++ A+ E G+V  F
Sbjct: 179 FGLTEPNHGSDPGSMETKAKYNSSSHTFTLTGSKTWITNSPVADICVVWAKCEDGKVRGF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           ++ R ++     GL   +++ K   R++AT       VE+   N    LL   +   GP 
Sbjct: 239 ILERGMK-----GLSTPKIEGKFSLRASATGMIIMDEVEVPEEN----LLPKASGLAGP- 288

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   ++   +  AE   +A R++    I    P+     M++ +AD+  
Sbjct: 289 -----FGCLNNARYGIAWGALGAAEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLT 343

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 344 EITLGLQSCLQLGRLIDDKKAAPE-------MISLLKRNSCGKALDIARQARDMLGGNGI 396

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 397 ADEYHIIRH 405


>gi|7656849|ref|NP_055199.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Homo
           sapiens]
 gi|26006699|sp|Q9UKU7|ACAD8_HUMAN RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Activator-recruited cofactor 42 kDa component;
           Short=ARC42; AltName: Full=Acyl-CoA dehydrogenase family
           member 8; Short=ACAD-8; Flags: Precursor
 gi|6465955|gb|AAF12736.1|AF126245_1 acyl-Coenzyme A dehydrogenase-8 precursor [Homo sapiens]
 gi|7020392|dbj|BAA91109.1| unnamed protein product [Homo sapiens]
 gi|9739150|gb|AAF97922.1| acyl-CoA dehydrogenase 8 [Homo sapiens]
 gi|119588239|gb|EAW67835.1| acyl-Coenzyme A dehydrogenase family, member 8, isoform CRA_c [Homo
           sapiens]
          Length = 415

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F            S   GFL+    +
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGL 273

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     +   R   G  L     ++  +AD+A 
Sbjct: 274 NGGRI---------NIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMAT 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 325 RLVAAR-LMVR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 378

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ ++ ++ R+S  + IL GS   M
Sbjct: 379 LKDYAVQQYVRDSRVHQILEGSNEVM 404


>gi|295699906|ref|YP_003607799.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439119|gb|ADG18288.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 114/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGTLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   +  +     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGN--DHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|302537930|ref|ZP_07290272.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446825|gb|EFL18641.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 380

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 125/309 (40%), Gaps = 41/309 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS      + T    + W P   S E           T  AI +  TE   G+D
Sbjct: 94  IIGPYLTS------LGTEEQKRRWLPGFCSGE-----------TITAIAM--TEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I +  +   D  + L+G K F+S+  ++D  I++A+     G   +  L+ +    G
Sbjct: 135 LQGIRTSAEDRGDH-WLLNGSKTFISNGILADLVIVVAKTTPEGGAHGLSLLVVERGAEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +KIG +S  T EL F++       LLG+LN +      + ++  L    M ++
Sbjct: 194 FERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELNGAF-----VHLMTNLAQERMGIA 248

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              ++ AE +      Y + R   G  L     ++  IA++A + A             D
Sbjct: 249 MAAIAAAEHLLEITTTYVKEREAFGRPLAKLQHIRFEIAEMATECAVTRTF-------LD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +         + A + K+W  ++   V    ++  GG GY+ E  +AR + +    +
Sbjct: 302 RCITDHANGELDHVHASMAKWWATELQKRVADRCLQLHGGYGYMTEYRVARAFTDGRIQT 361

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 362 IYGGTTEIM 370


>gi|170699131|ref|ZP_02890185.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170135926|gb|EDT04200.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 422

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 143/361 (39%), Gaps = 42/361 (11%)

Query: 138 ARLYLMAQL---EAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +R  LMA L   +AG    L  P +    +VAL      H     + F R + PT +   
Sbjct: 81  SRTALMAYLGYADAGLALALPGPGLAMPPVVAL-----AHPQQQARFFERFHSPTPRWG- 134

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
                     +TE   G+D  A+ +  +K + G + L+G K F+++   +D  I  A V 
Sbjct: 135 -------AFAITEPDCGSDATAMRTTARKTAHG-WVLNGTKCFITNGARADYVITFATVN 186

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--- 307
            + G F +     D    G    R++  +G R +    L +++  G +  D  +  G   
Sbjct: 187 RQQGRFGIRAFCVDSGTPGFSVTRIERMVGLRVSQLAVLTYAD--GEVPDDALLCRGDER 244

Query: 308 PVEDM--------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           P++D              L S+IM  +  RV    A ++    H    I +    +   +
Sbjct: 245 PLDDAFAGAQHAWDYFRPLLSSIMIGTCRRVREELAAYFDAGGHPRD-IHLRVADVNHHL 303

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D+   I  A  L    A  FD   + S +A+       I K +  ++A  +   A+E  
Sbjct: 304 VDLDRQITTAHLLCHHAAWKFDRGVASSMDAS-------IAKAYASRVAARITQTALELA 356

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           G  G     S+ + YR++ A  I+ G+G+   L +   L++ + L   +     Q    S
Sbjct: 357 GLDGIAAYPSLEQSYRDAKAFDIMEGTGDLQRLMIARALQRASALPSDVACGTSQRPAPS 416

Query: 480 G 480
           G
Sbjct: 417 G 417


>gi|149202583|ref|ZP_01879555.1| glutaryl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149143865|gb|EDM31899.1| glutaryl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 407

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  + + G Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAVRTTGG-YRLTGSKMWISNSPIADVFVVWAKSEAHDGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+   N       LL ++    GP    
Sbjct: 208 F----ILEKGM-KGLSAPKVGGKLSLRASVTGEIVMDNVEVPESALLPNVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIA 367
                L+ A   ++   +  AE   +A R++       ++P+ +       +A++  +I 
Sbjct: 259 --FGCLNRARYGIAWGVMGSAEFCWHASRQYGLDRKQFNRPLAQTQLFQLKLANMQTEIT 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+    DEA +  E       M  + K   C  A  +   A +  GG+G  EE
Sbjct: 317 LGLQAALRVGRLMDEANAAPE-------MISMIKRNNCGKALEIARHARDMHGGNGISEE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVIRH 375


>gi|152977273|ref|YP_001376790.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026025|gb|ABS23795.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 594

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEDQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+V+G     F+V    E   P G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKVDGEHFSAFIV----EKEYP-GV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       +LG+  +  G V    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENVLGE--IGKGHVIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAIEISAEYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 RSEE-------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              E             A YA I   + K +  ++   V+ E ++  GG G++ E  I R
Sbjct: 335 TLTEKEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYVVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|229094114|ref|ZP_04225198.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-42]
 gi|228689326|gb|EEL43145.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-42]
          Length = 608

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G +   F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEQFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|229128412|ref|ZP_04257393.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-Cer4]
 gi|228655271|gb|EEL11128.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-Cer4]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKNFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|169633497|ref|YP_001707233.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169152289|emb|CAP01199.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 430

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G ++  T  L+FS+T    LG  +       D+  L++   A+ +   ++   A  I Y
Sbjct: 270 MGLKAAETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKY 326

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +  +  +   IAD+A++I A   L    A+  +  K    EA  ARI+  
Sbjct: 327 ANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-- 384

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 385 -----CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|218898163|ref|YP_002446574.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus G9842]
 gi|218540772|gb|ACK93166.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus G9842]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + R +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYRPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|152987509|ref|YP_001351048.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150962667|gb|ABR84692.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 402

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 27/274 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +   +  D  Y L+G K F++S   +DA ++ A ++  +G   +
Sbjct: 132 MAITEPGCGSDSAAIRTTATQDGDH-YVLNGEKIFVTSGERADAVVVWATLDRSLGRAAI 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVEDM 312
              ++E G+P G+   RL+ K+G +++ T  + F++       LLG  +++V  G    M
Sbjct: 191 KSFVVEKGTP-GMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVM 249

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILID--QPVMKRAIADIAL----- 364
           +     D+    V+GM V +A+ A+   R      G   D  +P++  + A+  L     
Sbjct: 250 ET---FDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLVVSHAEATLYRLEA 306

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AA  L+ + A   D     S+EA+ A+  A        ++A  +  + +E  G  GY
Sbjct: 307 EWEAARLLTLKAAWMADNKLPNSKEASIAKAKA-------GRVANEITLKCVELAGALGY 359

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            EE  + +  R+S    I  G+    +L V   L
Sbjct: 360 AEEELLEKWARDSKILDIFEGTQQIQLLIVARRL 393


>gi|119717835|ref|YP_924800.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538496|gb|ABL83113.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 29/291 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++ + TP     W P + S E             +   + +TE   G+D+  I +     
Sbjct: 101 ISQLGTPEQKARWLPGLVSGE-------------LISAIAMTEPGAGSDLQGIKTTAIDK 147

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  Y L+G K F+S+  +SD  I++ + +   G   +  L+ +    G    R  +K+G
Sbjct: 148 GDH-YVLNGSKTFISNGILSDLVIVVCRTDPDAGHQGISLLVVERGMKGFERGRNLDKMG 206

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEA 335
            ++  T EL F         LLG     +G V  M  L    +  A+M+V+ +   L  +
Sbjct: 207 MKAQDTAELFFDEVEVPKENLLG--AEGSGFVSLMVNLAQERISIAVMAVAAIEQMLEVS 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +      +  +A++A D   A           ++   +         
Sbjct: 265 LSYAKDRQAFGKPIGSFQHNRFLLAEMATDAHIARVF-------VNDCVLKLNAGQVDPA 317

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A + K+W  +    V+ +A++  GG GY+ E  +AR Y +S   +I  G+
Sbjct: 318 LASMAKWWTTETQKKVVDQAVQLHGGYGYMMEYPVARAYVDSRIQTIYGGT 368


>gi|326927860|ref|XP_003210106.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Meleagris gallopavo]
          Length = 574

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 139/314 (44%), Gaps = 44/314 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLA---------QVE 250
           LTE   G+D A+I ++     DG Y  L+G K W  +  ++  F + A         QV+
Sbjct: 132 LTEPGSGSDAASIQTRATLSEDGKYFLLNGSKVWISNGGLASIFTVFARTEIVEKDGQVK 191

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+ + + ++K+G R + T E+ F NT        G + G   
Sbjct: 192 DKITAFIVERDF-----GGVTHGKPEDKLGIRGSNTCEVHFENTKVPVENVLGEIGGGFK 246

Query: 304 VSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE--AIHYARRRHVSGGILIDQPVMKRAIA 360
           V+      M IL     ++ S S GM   L E  A H   R+  +   L +  +++    
Sbjct: 247 VA------MNILNSGRFSMGSASAGMIKKLIELTAEHACTRKQFNRK-LSEFGLIQEKFC 299

Query: 361 DIALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +A+      ++++  A   D       S EAA  ++ +     W C      ++EA++ 
Sbjct: 300 FMAVKAYVMESMAYLTAGMMDRPGLPDCSVEAAMVKVFSS-EGAWAC------VSEALQI 352

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +GG GY+++    R+ R+S    I  G+     M + +  +   G  L +++    + ++
Sbjct: 353 LGGLGYMKDYPYERYLRDSRILLIFEGTNEILRMYIALTGMQHAGKILTDKIKEIKKGNI 412

Query: 477 GSSGKKVITILRDS 490
           G + ++++  +RDS
Sbjct: 413 GLALQELVNKVRDS 426


>gi|218233266|ref|YP_002367801.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus B4264]
 gi|218161223|gb|ACK61215.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus B4264]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|158425182|ref|YP_001526474.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158332071|dbj|BAF89556.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 405

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A + ++ +KI DG Y L+G K W  +SP++D  ++ A
Sbjct: 136 PKLATGEWVGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLTGAKMWITNSPIADIAVVWA 194

Query: 248 QVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGF 297
           +       +  F+V R ++     G    +++ K+  R++ T       VE+   N    
Sbjct: 195 KSAAHGDAIRGFIVERGMK-----GFSTPKIEKKLSLRASITGEIVLEGVEIPEEN---- 245

Query: 298 LLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           LL +++   GP   +    Y +   ++  +     L  A  Y   R   G  L    +++
Sbjct: 246 LLPNVSGLKGPFGCLNRARYGIGWGVLGAA--EACLEAARQYTLDRKQFGRPLAQTQLVQ 303

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD++ DIA       R    FDE +   E  +Y        K   C  A  +   A 
Sbjct: 304 KKLADMSTDIAFGLQACLRAGRLFDEGQLAPETISY-------IKRNNCGKALDIARVAR 356

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G   E  + RH
Sbjct: 357 DMHGGNGISAEFHVIRH 373


>gi|150397376|ref|YP_001327843.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150028891|gb|ABR61008.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           L +TE   G+D+  +    +   D  + ++G K F+S      F+++    G        
Sbjct: 122 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 180

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++ CFLV R    G+P G   +   N + +R      L F +       +LG+++   
Sbjct: 181 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHRGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D      L  A  SV   R +   A+ YA  R   G  +     +   +AD+  ++
Sbjct: 236 DLANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPIGANQGVSFKLADMITEL 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A   D+    + E A A++ A        +M   V  EA++  GG G ++
Sbjct: 296 DAADLLTLSAAWRLDQGLPANREIASAKVYA-------TEMLARVTDEAIQIYGGMGLMD 348

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 349 DLPLARFWRDARVERIWDGT 368


>gi|114570289|ref|YP_756969.1| isovaleryl-CoA dehydrogenase [Maricaulis maris MCS10]
 gi|114340751|gb|ABI66031.1| isovaleryl-CoA dehydrogenase [Maricaulis maris MCS10]
          Length = 390

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  + L+G K W  ++P ++  I+ A+ +   G   +
Sbjct: 131 LAMSEPGAGSDVVSMKLKAERKGDH-FVLNGSKMWITNAPAANTLIVYAKTDTSAGSRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       ++GD       VE +   
Sbjct: 190 SAFIIERGMKGFSVAQKLDKLGMRGSETGELVFEDCEVPVENMMGDEGKG---VEILMSG 246

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   V  M+  +   + Y R R   G  + +  +++  +AD+ + + A  A 
Sbjct: 247 LDYERAVLASGPVGIMQSCMDVVMPYIRERKQFGKSIGEFQLVQGKLADMYVRMNATRAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA A +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 307 VYAVAQACDRGQTTRKDAAGAIL-------YAAEGATQMALDAIQLLGGNGYINEFPAGR 359

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 360 LLRDAKLYEIGAGT 373


>gi|30263054|ref|NP_845431.1| acyl-CoA dehydrogenase, short-chain specific, putative [Bacillus
           anthracis str. Ames]
 gi|47528397|ref|YP_019746.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49185895|ref|YP_029147.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus anthracis
           str. Sterne]
 gi|165868543|ref|ZP_02213203.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0488]
 gi|167631987|ref|ZP_02390314.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0442]
 gi|167637262|ref|ZP_02395542.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0193]
 gi|170685104|ref|ZP_02876329.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0465]
 gi|170705288|ref|ZP_02895753.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0389]
 gi|177649853|ref|ZP_02932854.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0174]
 gi|190564783|ref|ZP_03017704.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis Tsiankovskii-I]
 gi|227814097|ref|YP_002814106.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. CDC 684]
 gi|229601563|ref|YP_002867324.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0248]
 gi|254685644|ref|ZP_05149503.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. CNEVA-9066]
 gi|254723055|ref|ZP_05184843.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A1055]
 gi|254738108|ref|ZP_05195811.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. Western North America USA6153]
 gi|254742719|ref|ZP_05200404.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. Kruger B]
 gi|254752425|ref|ZP_05204461.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. Vollum]
 gi|254760942|ref|ZP_05212966.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. Australia 94]
 gi|30257687|gb|AAP26917.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. Ames]
 gi|47503545|gb|AAT32221.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49179822|gb|AAT55198.1| acyl-CoA dehydrogenase, short-chain specific, putative [Bacillus
           anthracis str. Sterne]
 gi|164715269|gb|EDR20786.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0488]
 gi|167514769|gb|EDR90135.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0193]
 gi|167532285|gb|EDR94921.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0442]
 gi|170130143|gb|EDS99005.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0389]
 gi|170671364|gb|EDT22102.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0465]
 gi|172083805|gb|EDT68864.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0174]
 gi|190564100|gb|EDV18064.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis Tsiankovskii-I]
 gi|227003994|gb|ACP13737.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. CDC 684]
 gi|229265971|gb|ACQ47608.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           anthracis str. A0248]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|21224773|ref|NP_630552.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|4154064|emb|CAA22717.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 401

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 39/277 (14%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI--MLAQVEGR---------VGC 255
           G+D++AI+S+   + DG  Y L+G K +L++  + + +  ++   EG          +  
Sbjct: 135 GSDVSAISSKA--VRDGEEYVLNGQKMWLTNGGTSSLVAVLVKSDEGHPEGTAPHKSMTT 192

Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           FLV +    G    GL      +K+G +   T EL        L    N   G V     
Sbjct: 193 FLVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMDG----LRIPANRVLGGVTGRGF 248

Query: 315 LIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +D      ++V+     +A+      + YA++RH  G  +     ++  +A++A  +
Sbjct: 249 YQMMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRHTFGKQIAQHQAIQFKLAEMATKV 308

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +
Sbjct: 309 EAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSK 361

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 362 EYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|195125824|ref|XP_002007375.1| GI12421 [Drosophila mojavensis]
 gi|193918984|gb|EDW17851.1| GI12421 [Drosophila mojavensis]
          Length = 421

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 129/298 (43%), Gaps = 51/298 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + PK+ S E+               GL ++E   G+D+ ++  + ++  D  Y
Sbjct: 140 TPEQKEKYLPKLCSGEHIG-------------GLAMSEPGAGSDVVSMKLRAERKGD-YY 185

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKI 279
            L+G K+++++  SDA  ++  V  + G   VP        ++E G       Q+L +K+
Sbjct: 186 VLNGSKFWITNG-SDAETLI--VYAKTGASGVPDRHAITAFIIETGWEGFSVAQKL-DKL 241

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSGM 328
           G R ++T EL F         DL V    +   E+  + + +          A   V  M
Sbjct: 242 GMRGSSTCELVFQ--------DLKVPAKNILGQENKGVYVLMSGLDFERLVLAAGPVGLM 293

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +   +  YA +R   G ++ +  +++  +AD+   + A  +  + +A + D     S+
Sbjct: 294 QAACDVSFDYAHQRKQMGKLIGEFQLLQGKMADMYTTLGACRSYLYSVARACDAGIRSSK 353

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A   +       +  + A  V  EA++ +GG+GYI +    R  R++    I  G+
Sbjct: 354 DCAGVIL-------YSAEKATQVALEAIQILGGNGYINDNPTGRILRDAKLYEIGAGT 404


>gi|163839310|ref|YP_001623715.1| acyl-CoA dehydrogenase E19 [Renibacterium salmoninarum ATCC 33209]
 gi|162952786|gb|ABY22301.1| acyl-CoA dehydrogenase E19 [Renibacterium salmoninarum ATCC 33209]
          Length = 390

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 53/310 (17%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDI 211
           S ++T  + V+L   P +H+      F  E       PM  +  A+ G GLTE   G+D 
Sbjct: 86  SVAITLEAGVSLGAMP-IHR------FGTEAQKEQWLPMLASGQALAGFGLTEPEAGSD- 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGR-----------VGCFLV 258
           A  T    ++ DG + ++G+K F+++  +D    + +  V G            +   LV
Sbjct: 138 AGGTKTKARLEDGSWIINGNKEFITNSGTDITRLVTVTAVTGESTRADGSIKKEISTILV 197

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313
           P      +  G   ++  NK+G  +        S+T    L D+ V    +  ++     
Sbjct: 198 PT-----NTQGFKAEKAYNKVGWNA--------SDTHPLTLADVRVPEANLLGVEGRGYA 244

Query: 314 -ILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  LD   ++++ +        + E++ YA+ R   G  +     ++  IA +A    
Sbjct: 245 NFLSILDEGRIAIAALATGAAQGCVDESVRYAKERMAFGNNIGKYQAIQFKIARMA---- 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A A + RLA  + +A +R +     +  A I K    + A     +A +  GG G++ E
Sbjct: 301 -ARAHTARLA--YYDAAARMQAGKSFKTEAAIAKMIAGEAAMDNARDATQVFGGYGFMNE 357

Query: 428 RSIARHYRES 437
             ++RHYR+S
Sbjct: 358 FRVSRHYRDS 367


>gi|91794368|ref|YP_564019.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91716370|gb|ABE56296.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
          Length = 391

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 28/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++  K   G Y L+G K W  +SP++D F++ A+++G +  F++
Sbjct: 136 FGLTEPDVGSDPGGMKTRATKTQGG-YVLTGAKMWITNSPIADVFVVWAKLDGEIRGFVL 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            + ++     GL   +++ K   R++ T E+   N       LL +++   GP       
Sbjct: 195 EKGMK-----GLSAPKIEGKFSLRASITGEIVMDNVEVGEDALLPNVSGLKGPFG----- 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   +A R++    I  ++P     ++++ +AD+  DI    
Sbjct: 245 -CLNKARYGIAWGALGAAEFCWHAARQYSLDRIQFNRPLAATQLIQKKLADMQTDITMGL 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +     D       EA     ++ I +  C K A  +   A +  GG+G  +E  +
Sbjct: 304 FACLQAGRLMD------SEALPVEAISMIKRNSCGK-ALDIARMARDMHGGNGISDEFHV 356

Query: 431 ARH 433
            RH
Sbjct: 357 IRH 359


>gi|327440686|dbj|BAK17051.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 314

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 23/195 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+  AA+ +   +  D  Y L+G K +++ +P++  F ++A  +   G   +  
Sbjct: 125 LTETTAGSHAAALKTTAVRKGDK-YILNGAKQYITNAPIAGVFTVMAVTDPTKGAKGITS 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            L D S  GL   + + K+G R + + E+ F         D  V    V  ++ L Y+++
Sbjct: 184 FLVDKSAPGLIIGKTEEKMGLRGSHSSEIFFE--------DCEVPVENVLGVEGLGYVNA 235

Query: 321 AIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             +  +G R  LA             ++ YA  R   G  + +Q +++  +A++ALDI  
Sbjct: 236 LTILANG-RAGLAARNLGSAQKLFELSVKYAHEREQFGKPIFEQQIIQHYLAEMALDIET 294

Query: 369 ATALSFRLANSFDEA 383
             + ++R+A   D+ 
Sbjct: 295 LRSFTYRVAWMVDQG 309


>gi|331695630|ref|YP_004331869.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326950319|gb|AEA24016.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 398

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 32/276 (11%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVE- 250
           S  +  GLTE  GG+D   I ++ +++ D  + ++G K F++   +P S   I+ A  + 
Sbjct: 131 STFVSFGLTEPSGGSDAGNIGTRARRVGDD-WVINGAKQFITNSGTPFSRYVILFAATDD 189

Query: 251 ----GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
               GR  V  FLVP L   G   G  Y     K G RS+ T  L F +       LLG+
Sbjct: 190 DPGTGRPPVSAFLVP-LDAPGVTVGPAYA----KQGWRSSDTHPLYFDDVRLPADALLGE 244

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G  E ++ L +  L  A MS+   R  L +++ +   R   G  L     +   +
Sbjct: 245 QG--RGYREALRFLTWARLPIAAMSIGVARGCLVDSVRFVGERASMGRPLGGHQGVAFQV 302

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           ADIA  +A AT L++  A  +D       EAA A+++A        ++A +    A +  
Sbjct: 303 ADIAAAVATATVLTYDGAWKYDRGLPIEREAAIAKLVA-------SELANSAGYTATQLA 355

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG G++EE +  RH+++  A  + +G G + V  +L
Sbjct: 356 GGYGFMEETASTRHHQD--ARILTVGEGTSEVQRML 389


>gi|171058802|ref|YP_001791151.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170776247|gb|ACB34386.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 390

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 15/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  +   +D  ++ A+ E ++G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGSKMWITNGGDADTLVVYAKTEPQMGARGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  +    +K+G R + T  L F +     +   NV  G     K+L+  
Sbjct: 187 TAFIIEKGFKGFSHGTHLDKLGMRGSNTYPLFFEDC---EVPAENVLGGEGNGAKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M   +   + +   R   G  + +  +M+  +AD+     A  A 
Sbjct: 244 LDYERVVLSGGPLGIMAACMDAVVPFVHERKQFGQSIGEFQLMQGKLADMYSTFQACRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++ +A + D    R + +   R  A     +  + A  +  EA++ +GG GY  E  + R
Sbjct: 304 AYAVAQACD----RGDHSRTLRKDAAGVILYTAEKATWMAGEAIQALGGVGYTNEYPVGR 359

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 360 LWRDAKLYEIGAGT 373


>gi|160945286|ref|ZP_02092512.1| hypothetical protein FAEPRAM212_02805 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443017|gb|EDP20022.1| hypothetical protein FAEPRAM212_02805 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105503|emb|CBL03047.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii SL3/3]
          Length = 389

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 55/318 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKI---S 222
           TP     + PK+ S E+              +G  GLTE   GTD     +QGQ+     
Sbjct: 103 TPEQKAKYLPKLCSGEW--------------LGAFGLTEPGAGTD-----AQGQQTIAKE 143

Query: 223 DGIY-CLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQR 274
           DG Y  L+G K F+++   +D FI++A  +      GR        ++E   P G    +
Sbjct: 144 DGDYWVLNGSKIFITNAGFADVFIVIAVTDNVLDKRGRPTKLCSAFIVERTDP-GFSVGK 202

Query: 275 LKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            ++K+G R ++T EL F +         G       ++   ++  +I I    A  ++  
Sbjct: 203 AEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQLAMATLDGGRIGI----ASQALGI 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NSFDEA 383
              +L E I Y + R   G  +      +  +A++   + AA  L +  A     + D A
Sbjct: 259 AEGALEETIAYVKERKQFGRAIAAFQNTQFELAEMKARVEAAKYLVYAAALKKQQAMDGA 318

Query: 384 KSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           K R S EAA A+++A  T       A  V    ++  GG GY  +  I R  R++    I
Sbjct: 319 KVRYSVEAAQAKLIAART-------ASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+    ++ +   L K
Sbjct: 372 YEGTSEVQMMVISGALLK 389


>gi|86134545|ref|ZP_01053127.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85821408|gb|EAQ42555.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 604

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 130/292 (44%), Gaps = 38/292 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252
           LTE + G+ ++ + ++    +DG Y ++G K F+S    +       ++LA++EG     
Sbjct: 164 LTEPQAGSSLSDVVTKATPTNDGYYKITGQKIFISGGDYNGAENIVHLVLARIEGAPKGT 223

Query: 253 --VGCFLVP--RLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
             +  F+VP  RL EDG+   N +       K+G +   T  L F ++    G+L+G  +
Sbjct: 224 KGISLFVVPKNRLKEDGTLEYNDVMTVADFQKMGQKGYCTTHLGFGDSDDCRGWLVGQEH 283

Query: 304 VSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----------GIL 349
                +  M    +I +   +A ++++  R SL  A    + R +S            ++
Sbjct: 284 KGLAQMFLMMNGARIAVGRGAAAIAMAAYRTSLQYANERPQGRKLSADGKKNPTEKQSLI 343

Query: 350 IDQPVMKRAI---ADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAPITKYW 403
           I+ P ++R +     I     +   L+ +  +    A S+ E+  Y     ++ PI K +
Sbjct: 344 IEHPDVRRMLLLQKSIVEGSLSLVLLASKYQDILTTATSKEEKEKYHLLLEMIIPIVKTY 403

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             +     +   ++ +GG G+  + ++ ++YR+   +++  G+      D+L
Sbjct: 404 PSEAGAESVDNGLQVLGGYGFCTDFTLQQYYRDIRISALYEGTTGIQSQDLL 455


>gi|65316997|ref|ZP_00389956.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|228917638|ref|ZP_04081180.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228936306|ref|ZP_04099105.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228948734|ref|ZP_04111012.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228811041|gb|EEM57384.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228823422|gb|EEM69255.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228842015|gb|EEM87120.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 608

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|296391144|ref|ZP_06880619.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 287

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  ++D  I++A+ + + G   
Sbjct: 33  IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 90

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           +   + +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 91  ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 149

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +       I +++    +L   + Y R R   G  + D    +  +A++A
Sbjct: 150 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 199

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        R      + K     AA       + KYW   +   V+ E ++  GG G
Sbjct: 200 TEIQVGRVFVDRCMELHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 252

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  +AR + ++    I  G+   M
Sbjct: 253 FMWEYPVARAWADARVQRIYAGTNEIM 279


>gi|41350166|gb|AAS00428.1| acyl-CoA dehydrogenase [Saccharopolyspora spinosa NRRL 18395]
          Length = 401

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 32/286 (11%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSP 238
           R+Y P     M    V     ++E   G+D++AI ++  K    DG Y ++G K +L++ 
Sbjct: 112 RKYLPR----MATGEVRAAFSMSEPGCGSDVSAIRTKAVKDDDGDGDYTINGQKMWLTNG 167

Query: 239 MSDAFI--MLAQVEG------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVEL 289
            S   +  ++   EG       +  FLV +    G +  GL       K+G +   T EL
Sbjct: 168 GSANLVAVLVRTDEGSDSVYQNMTTFLVDKEAGFGETAQGLTVPGKIEKMGYKGVDTTEL 227

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH 343
            F     + G +LG   V       M   + +    ++  G  V+L      + YA++R 
Sbjct: 228 VFDGHRISAGQILG--GVPGRGFYQMMDGVEVGRVNVAARGCGVALRAFELGVVYAQQRE 285

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     +   +A++A  + AA  +  R A   D  +    E+  A       KY 
Sbjct: 286 TFGKAIAGHQAVLFRLAEMATKVEAAHQMMVRAARKKDSGQRNDLESGMA-------KYL 338

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             +    V+ ++    GG G+ +E  I R YRE+P   +L+G G A
Sbjct: 339 ASEYCAQVVEDSFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTA 382


>gi|301763004|ref|XP_002916928.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 415

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCF 256
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +        + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFVSGGGESDIYVVMCRTGEPGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL 315
           +V    E G+P GL + + + K+G  S  T  + F +    +   + N   G +  MK L
Sbjct: 219 IV----EKGTP-GLSFGKKEKKVGWNSQPTRAMIFEDCTVPVANRIGNEGQGFIIAMKGL 273

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               ++ A  S+     S+     Y   R   G  L     ++  +AD+A  + A+  L 
Sbjct: 274 NGGRINVASCSLGAAHASVVLTRDYLSVRKQFGESLASNQYLQFKLADMATRLVASR-LM 332

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A     A +  EE   A ++  + K +      A+  +A++  GG GY+++ ++ ++
Sbjct: 333 IRNA-----AVALQEEREDAVVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQY 387

Query: 434 YRESPANSILLGSGNAM 450
            R+S  + IL GS   M
Sbjct: 388 VRDSRVHQILEGSNEVM 404


>gi|254822320|ref|ZP_05227321.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           intracellulare ATCC 13950]
          Length = 246

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 44/249 (17%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G Y L G K F+S +  SD ++++A+  G     +  F+V +        GL +  L+ K
Sbjct: 1   GDYVLDGVKQFISGAGASDVYVVMARTGGEGPRGISAFIVEK-----DSAGLSFGALEEK 55

Query: 279 IGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIYLDSA 321
           +G  +  T ++                      FG  +  LN              L+ A
Sbjct: 56  MGWHAQPTAQVILEGVRVPADAMLGGADGEGAGFGIAMNGLNGGR-----------LNIA 104

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R AN+ D
Sbjct: 105 ACSLGGAQAAADKAGAYVRDRQAFGKSLLDEPTIRFALADMATGLETSRMMLWRAANALD 164

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E      +  + K +       V  +A++  GG GY+ E  + +  R+   + 
Sbjct: 165 TDDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLRVHR 218

Query: 442 ILLGSGNAM 450
           IL G+   M
Sbjct: 219 ILEGTNEIM 227


>gi|258512357|ref|YP_003185791.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479083|gb|ACV59402.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 198 IGLGLTEKRGGT--DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG 254
           +   LTE   GT  D+  I +      +G + L+G K  ++     A I ++A++EG  G
Sbjct: 137 VAFALTEPDNGTGIDLRTIAT----YENGKFVLNGRKHLITFAEEAAVIAVIAKMEGGAG 192

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
                 FLVP+        G+    + + +G++  +   +EF N       +LG++    
Sbjct: 193 RTGLTAFLVPQ-----GRKGMKLTPMPHMMGDKGCSHAVIEFENCEVGEDEVLGEIGEGF 247

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           G    + +  +LD +   ++   V LA+     A+ + RRR   G  L  +  ++  +A+
Sbjct: 248 G----VAVRGFLDQSRACIAQSAVGLAQEALDRALDHVRRRTTFGKALASRQAVQMRLAE 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + I  A  L    A  +D+ +  S EAA A+  A        +M   V   A+   GG
Sbjct: 304 MQIAIQGARLLCLDAAYKYDQGRDISLEAAIAKANA-------IRMVGEVTDGALSLYGG 356

Query: 422 SGYIEERSIARHYRES 437
            GY     + R YR++
Sbjct: 357 IGYAVTSPVERLYRDA 372


>gi|254451422|ref|ZP_05064859.1| isovaleryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198265828|gb|EDY90098.1| isovaleryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 122/262 (46%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ +++ + ++ +D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 123 LAMSESGAGSDVVSMSLKAERRND-RYILNGTKYWITNGAEADTLVVYAKTDPAAGSKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F +    F  +LG+          +++L
Sbjct: 182 TAFLIEKSMMGFTTSPHFDKLGMRGSNTAELVFDDVEVPFDNVLGEEG------RGVRVL 235

Query: 316 IY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G+ +      L E + Y  +R   G  + +  +M+  +AD+   + +A
Sbjct: 236 MSGLDYERVVLAGIGLGIVAACLDEVMPYIAQRKQFGEPIGNFQLMQGKVADMYTALNSA 295

Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGY 424
            A  + +A + D+   +R++ AA            CC    + A     +A++  GG+G+
Sbjct: 296 RAYVYEVAKACDKGTVTRADAAA------------CCLYASEQAMVQAHQAVQAFGGAGF 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           + +  +AR +R++    I  G+
Sbjct: 344 MADAPVARLFRDAKLMEIGAGT 365


>gi|325122074|gb|ADY81597.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 427

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK----IGNRSNATVELEFSNT 294
           ++D F++ A   G+   F+V            C + +  K    +G ++  T  L F++T
Sbjct: 234 LADVFLVSADFNGKPDVFVVQ-----------CNETISIKNTPAMGLKATETATLRFNHT 282

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LG  +       D+  L++   A+ +   ++   A  I YA  R   G  +  +  
Sbjct: 283 PALRLGATDFDYTAFVDLGNLMWCAMAVGTCEAVK---AYCIKYANERTAFGEPISHRQS 339

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IAD+A++I A   L    A+  +  K    EA  A ++       C + +  +  +
Sbjct: 340 VAFMIADMAIEIDAMRMLILNAASLAESGKPFHREAYLAHLL-------CAEKSMKIGTD 392

Query: 415 AMECIGGSGYIEERSIARHYRESPANSIL 443
            ++ +GG G+ +E ++ R YR+  A +IL
Sbjct: 393 GVQILGGHGFTKEHAVERWYRDLRATAIL 421


>gi|256061387|ref|ZP_05451531.1| Acyl-COA dehydrogenase, short-chain specific [Brucella neotomae
           5K33]
 gi|261325388|ref|ZP_05964585.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261301368|gb|EEY04865.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 385

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDCFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|196250572|ref|ZP_03149262.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196209921|gb|EDY04690.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 17/278 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++ AA+ +   +  D  Y ++G K ++++ + +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAALKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +   + +    G     ++ K+G R + + EL F N       +LG    
Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFTIGNVERKMGLRGSHSAELFFDNLEVPVENVLG--KE 228

Query: 305 STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  +KIL    + + + + G  + L E  + YA +R   G  +I+Q  ++  +A++
Sbjct: 229 GEGYINALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++ I    +  +R+A   D+     +EAA       I K +  ++   +   A++  GG 
Sbjct: 289 SMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGGL 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+++  I R++R++    I  G+       + N L K
Sbjct: 342 GYMKDYPIERYFRDARITKIYEGTSEIQRNIIANELRK 379


>gi|195492647|ref|XP_002094081.1| GE21636 [Drosophila yakuba]
 gi|194180182|gb|EDW93793.1| GE21636 [Drosophila yakuba]
          Length = 419

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 25/258 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D++ I ++ +K  D  Y ++G K W  +  +++ + +LA+      C    
Sbjct: 155 GVTEPGAGSDVSGIKTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTNPDPKCPPSK 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI 
Sbjct: 214 AFTGFIVERDTP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIA 269

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +  +
Sbjct: 270 MGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETS 329

Query: 370 TALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++RL A   D+ +  S  A+ A+  A         +A  + ++A++  GG+G+  E 
Sbjct: 330 R-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADVANKIASDAVQIFGGNGFNSEY 381

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 382 PVEKLMRDAKIYQIYEGT 399


>gi|126458000|ref|YP_001075993.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|167828597|ref|ZP_02460068.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850057|ref|ZP_02475565.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           B7210]
 gi|226196041|ref|ZP_03791627.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242312155|ref|ZP_04811172.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254194351|ref|ZP_04900783.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|254301556|ref|ZP_04969000.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|126231768|gb|ABN95181.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|157811141|gb|EDO88311.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|169651102|gb|EDS83795.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|225931934|gb|EEH27935.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242135394|gb|EES21797.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +      Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVGMKLRAEP-RGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S             I   +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDAGGSAHPRQVRKDCAGVIL--YTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|313234505|emb|CBY10462.1| unnamed protein product [Oikopleura dioica]
          Length = 707

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 122/270 (45%), Gaps = 32/270 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---------EG 251
           LTE   G+D +++ ++  K  DG + ++G K W     ++D F + AQV         + 
Sbjct: 267 LTEPGTGSDASSVQTRAVKQEDGSFLMNGGKIWITGGGIADIFTVFAQVPVEQEDGSTKD 326

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           ++  F+V R        G+ +   + K+G + + T E+ F +     +   N+     E 
Sbjct: 327 QMTAFIVERDF-----GGVTHGAPEKKMGIKCSNTAEVYFDDV---RIPAENIIGEVGEG 378

Query: 312 MKILI-YLDSAIM----SVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K+ +  L+S       +++G +  L  +A  +A  R      +     ++  +A +  +
Sbjct: 379 FKVAMEVLNSGRYGMGATLNGTQKGLIKKATEFAANRTQFRNKIYKFGAIQEKLARMHAE 438

Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A+ A+S+ +AN+ D + ++   EAA  +I A    + CC        E ++ +GG GY
Sbjct: 439 QYASEAVSYLVANAMDHKTENYHLEAACGKIFASERAWHCCD-------ETIQVMGGMGY 491

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           + E+ + +  R+     I  G+ + + L V
Sbjct: 492 MFEQGVEKVMRDLRIFRIFEGTNDILRLMV 521


>gi|260566169|ref|ZP_05836639.1| acyl-COA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260155687|gb|EEW90767.1| acyl-COA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 338

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 83  LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 140

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 141 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 194

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 195 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 254

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I 
Sbjct: 255 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGIE 308

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 309 KLVRDLRVHQILEGTNEIM 327


>gi|254821027|ref|ZP_05226028.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 54/320 (16%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + +  ++AL T  +  + W PK  + E             +   + +TE   G
Sbjct: 93  GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------LITAIAMTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L  +   
Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLAVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAI 322
            G    R  +KIG  +  T EL F+        D+ V   P E++        IYL   +
Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFT--------DVKV---PAENLLGQEGMGFIYL---M 243

Query: 323 MSVSGMRVS------------LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            ++   R+S            L + + Y + R   G  +      +  +A++A +     
Sbjct: 244 QNLPQERISIAIMAAAAMEQVLEQTLQYTKERKAFGKPIGSFQNSRFVLAELATEATVVR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +         + K  +E+AA A       K++C +    +I   ++  GG GY+ E  +
Sbjct: 304 LMVDEFVRLHLDHKLTAEQAAMA-------KWYCTEKQVHLIDRCLQLHGGYGYMREYPV 356

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR Y ++   +I  G+   M
Sbjct: 357 ARAYLDARVQTIYGGTTEIM 376


>gi|228908851|ref|ZP_04072683.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis IBL 200]
 gi|228850861|gb|EEM95683.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis IBL 200]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAIQQGEK-----WIINGRKTFTTMAPVLDYFIISASIEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|17548257|ref|NP_521597.1| acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17430503|emb|CAD17187.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 399

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 46/267 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---------- 248
             L+E   G+D+AA+    +   D  Y L G K W  +  ++D +++ A+          
Sbjct: 130 FALSEPEAGSDVAAMACAARADGDS-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 188

Query: 249 ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKN---KIGNRSNATVELEFSNTFGFLLGD 301
               VE     F +   ++  +P+ L   R  +     G R  A  E       GF +  
Sbjct: 189 SAFIVEAGTPGFEIAERIDVIAPHPLARLRFTDCRIPAGQRVGAAGE-------GFKVA- 240

Query: 302 LNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                     M+ L ++  S   +  G  R +L EA+  A  R +  G+L D  + +  +
Sbjct: 241 ----------MRTLDVFRTSVAAAALGFARRALDEALARATTRKMFNGVLADFQLTQAKL 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +A  I +A  L++R A   D+ +S + EAA A++ A        + A  VI  A++  
Sbjct: 291 AQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDAAVQMW 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG G + E+ + R YRE  A  I  G+
Sbjct: 344 GGLGVVSEQPVERLYREIRALRIYEGA 370


>gi|145225321|ref|YP_001135999.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|145217807|gb|ABP47211.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
          Length = 417

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   SD + ++A  +   G   +  
Sbjct: 162 LSEREAGSDAASMRTRAKADGDD-WILNGAKCWITNGGKSDWYTVMAVNDPDKGANGISA 220

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 221 FMVHVDDEGFSIGPKERKLGIKGSPTTELYFENCR--IPGDRIIGEPGTGFKTALATLDH 278

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 279 TRPTIGAQAVGIAQGALDAAIEYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYS 338

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 339 AA-----ARAERGEGNLGFISA-ASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 392

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 393 DAKITQIYEGT 403


>gi|322708425|gb|EFZ00003.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 540

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC 255
           L +TE   G+D+A +T + +   DG  + ++G K W  +   +D F    +   EG  G 
Sbjct: 267 LAITEPDAGSDVANLTCEARLSEDGKHFIVNGEKKWITNGIWADYFTTAVRTGGEGMNGV 326

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  L+E G   G+  +R+  + G  S+ T  + F +       LLG  +   G +   
Sbjct: 327 SLL--LIERGP--GVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLLGKKDKGFGVIMTN 381

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +   I  +   RV   E++ YA +R   G  LI+ PV++  +A +A  I A+   
Sbjct: 382 FNHERIGIIIQCLRFSRVCFEESVKYANKRRTFGKKLIEHPVIRMKLAHMARQIEASYNW 441

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMECIGGSG 423
              L N   + +   E  A  R+  PI         T  +C + A  +        GG G
Sbjct: 442 ---LENMIYQCQKMGEHEAMLRLGGPIAGLKAQSTVTFEFCAREASQIFGGLSYSRGGQG 498

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
                 + R YR+  A +I  GS   M+
Sbjct: 499 ----GKVERLYRDVRAYAIPGGSEEIML 522


>gi|184201921|ref|YP_001856128.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183582151|dbj|BAG30622.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 393

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 38/290 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V L  T    + W P++ S +                G GLTE   G+D     ++   +
Sbjct: 105 VYLFGTEEQKQQWLPQLASGQ-------------ALAGFGLTEPEAGSDAGGTRTRA-AL 150

Query: 222 SDGIYCLSGHKWFLSSPMSD---------AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +DG + ++G K F+++  +D                 +GR    +   L+   +P G   
Sbjct: 151 TDGNWVINGSKEFITNSGTDITKLVTVTAVTGTTTTADGREKKEISTILVPTDTP-GFTA 209

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
           Q+  NK+G  ++ T  L F +       LLG+     G    ++IL    +  A ++   
Sbjct: 210 QKAYNKVGWNASDTHPLTFEDVTVPEANLLGERG--RGYANFLRILDEGRIAIAALATGA 267

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  L EAI YA  R   G  +     +   IA +   +  A    +  A+   + K   
Sbjct: 268 AQGCLEEAIRYATEREQFGRSIGKNQAVAFKIARMRARVHQARLAYYDAASRMLKGKPFK 327

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            EAA A+++A        + A     +A +  GG G+I E  +ARHYR+S
Sbjct: 328 TEAAIAKLVA-------GEAAMDNARDATQVFGGYGFINEFRVARHYRDS 370


>gi|67902856|ref|XP_681684.1| hypothetical protein AN8415.2 [Aspergillus nidulans FGSC A4]
 gi|40747881|gb|EAA67037.1| hypothetical protein AN8415.2 [Aspergillus nidulans FGSC A4]
 gi|259484351|tpe|CBF80495.1| TPA: Acyl-CoA dehydrogenase (Eurofung) [Aspergillus nidulans FGSC
           A4]
          Length = 438

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 51/351 (14%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L  PS +  +  A  T P +   +  K    ++ P      ++  +AI    TE   G+D
Sbjct: 115 LSGPSGSLTAGFAFGTPPIIK--YGSKELQEKFLPDLLTGKKRNCIAI----TEPDAGSD 168

Query: 211 IAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +A IT+   K +DG Y +     KW  +   SD   M  +  G     L   ++   +  
Sbjct: 169 VAGITTTATKSADGKYYIVNGNKKWITNGIWSDYSTMAVRTGGPGAGGLSLLVVPLKNYP 228

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILI---- 316
           G+  QRLK   G  +  T  +E        L ++ V   PVE+        MK+++    
Sbjct: 229 GVTMQRLKVS-GQITGGTTYIE--------LDEVKV---PVENLIGLEGDGMKMIMNNFN 276

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI----AAAT 370
              L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A    ++    A   
Sbjct: 277 HERLTIAVGVTRQARVALSTAFSYCLKREAFGKTLMDQPVVRHRLAKAGAELETMWAFVE 336

Query: 371 ALSFRLANSFDEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            L ++L N   E   R      A A+    +    C + A  +   A     G G + E 
Sbjct: 337 QLLYQLTNLPKEEADRQLGGITAMAKAKGAMVLNECAQTAVLLFGGAGFTKQGQGELAEA 396

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
            +    R+ P   I  GS +        LL+       +LF   E+ LG +
Sbjct: 397 IL----RDVPGARIPGGSEDV-------LLDLSIRQLVKLFKAEEKKLGKA 436


>gi|302555232|ref|ZP_07307574.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472850|gb|EFL35943.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 401

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 47/281 (16%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPR 260
           G+D++AITS+   + DG  Y L+G K +L++  + + + +         EG      +  
Sbjct: 135 GSDVSAITSKA--VKDGEEYVLNGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTT 192

Query: 261 LLEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVE 310
            L +  P       GL      +K+G +   T EL        ++  L +      G V 
Sbjct: 193 FLVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPADRVLGGVT 244

Query: 311 DMKILIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +D      ++V+     +A+      + YA++RH  G  +     ++  +A++
Sbjct: 245 GRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVQYAQQRHTFGRPIAQHQAIQFKLAEM 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG 
Sbjct: 305 ATKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGY 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           G+ +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 358 GFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|113680425|ref|NP_032123.2| glutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]
 gi|113680427|ref|NP_001038209.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]
 gi|38174647|gb|AAH61158.1| Glutaryl-Coenzyme A dehydrogenase [Mus musculus]
 gi|74222609|dbj|BAE38166.1| unnamed protein product [Mus musculus]
          Length = 438

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + ++ +   S+  Y LSG K W  +SP++D FI+ A+ E      +
Sbjct: 177 FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNC---I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              +LE G   GL   R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 234 RGFILEKGM-RGLSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 288

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 289 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 347 LHACLQLGRLKDQDKATPE-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYH 399

Query: 430 IARH 433
           + RH
Sbjct: 400 VIRH 403


>gi|89072818|ref|ZP_01159375.1| putative acyl-CoA dehydrogenase [Photobacterium sp. SKA34]
 gi|89051340|gb|EAR56795.1| putative acyl-CoA dehydrogenase [Photobacterium sp. SKA34]
          Length = 386

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 31/285 (10%)

Query: 175 APKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A +IF    D   K   P   T   IG L ++E   G+D+ ++  + +   D  + L+G+
Sbjct: 102 ANQIFRNGNDAQRKQYLPALITGEHIGALAMSEVNAGSDVMSMQLKAEDHGDH-FVLNGN 160

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  + P ++  ++ A    R     +   + +   +G    +  NK+G R + T EL 
Sbjct: 161 KMWITNGPEANTLVVYA----RTSVNAITAFIIESQFDGFSTAQKLNKLGMRGSNTCELV 216

Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARR 341
           F N       +LGD++         K+L+  LD   + ++   + +A++     I Y   
Sbjct: 217 FINCIVPKKNVLGDVD------HGAKVLMSGLDFERVVLAAGPLGIAQSCLDVVIPYIHE 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  IAD+   + AA +  + +A + D  +   ++AA   +++    
Sbjct: 271 RKQFGKAIGEFELIQAKIADMYTQLNAARSYVYTVAKACDRGEVTRKDAAGVILLS---- 326

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               ++A  +  E ++ +GG+GYI +    R  R++    I  G+
Sbjct: 327 ---AELATKMALETIQILGGNGYINDYPAGRLLRDAKLYEIGAGT 368


>gi|326386151|ref|ZP_08207775.1| long-chain acyl-CoA dehydrogenase [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326209376|gb|EGD60169.1| long-chain acyl-CoA dehydrogenase [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 384

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 43/293 (14%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ S E             V   + +TE   G+D+  + +  +K  DG  Y L+G
Sbjct: 113 RTWLPKLVSGE-------------VVTAIAMTEPGTGSDLQGMRTTAKK--DGNHYVLNG 157

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K ++++   +D  ++  + +  +      V  LL + +  G    R  +KIG     T 
Sbjct: 158 SKTYITNGQNADLILVCCKTDTAIEPAWKGVSILLVEATREGFRRGRNLDKIGQDEADTS 217

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS---------AIMSVSGMRVSLAEAIHY 338
           EL F +        + ++    E+ K  IYL S         A+ + +  + +  + + +
Sbjct: 218 ELFFDDV------RVPITNCLGEEGKGFIYLMSELPQERLSIAVSAQASAQRAFDDTVAF 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMA 397
            R R   G  ++D    +  +AD+   +    A L + LA    +  +  E AA      
Sbjct: 272 TRERKAFGKPILDFQNTRFTLADLKTKLQVGWAHLDWALARHLRKELTPEEGAA------ 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              K W  ++   V+ + ++  GG+GY+ E +IAR +R +    I  G+   M
Sbjct: 326 --AKLWHTELQWEVMDKCLQLHGGAGYMNEYAIARAWRGARVTRIFGGTNEIM 376


>gi|299769371|ref|YP_003731397.1| putative acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298699459|gb|ADI90024.1| putative acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 381

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 117/311 (37%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R ++  A  Y + R   G  +      +  +A   +D  A  A   R    
Sbjct: 247 -ASTAIGAIRGAIDLATAYVKERQAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSSDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|289648710|ref|ZP_06480053.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 387

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ + +     +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGTLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|290956279|ref|YP_003487461.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260645805|emb|CBG68896.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 401

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AITS+  +  D  Y L+G K +L++  +   + +         EG      +   
Sbjct: 135 GSDVSAITSKAVRDGDE-YVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313
           L +  P       GL      +K+G +   T EL      G  +    V  G       +
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGTTGRGFYQ 250

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A  + A
Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKQIAQHQAIQFKLAEMATKVEA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E 
Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|254694010|ref|ZP_05155838.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           3 str. Tulya]
 gi|261214301|ref|ZP_05928582.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260915908|gb|EEX82769.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
          Length = 385

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 24/259 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTIIFDNCRVPVENRLGDEGVG------FKIAMP 241

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  ++AA+  
Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+  D    ++ +A     MA   K +    +  V  E ++ +GG GY+ +  I 
Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANETLQLLGGYGYLHDYGIE 355

Query: 432 RHYRESPANSILLGSGNAM 450
           +  R+   + IL G+   M
Sbjct: 356 KLVRDLRVHQILEGTNEIM 374


>gi|239611288|gb|EEQ88275.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327348706|gb|EGE77563.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 516

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 40/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +   K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 249 LAVTEAFAGSDVAGIRTTATKTPDGKHYIINGTKKWITNGMWADYFVTACRTEKGFSVIL 308

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR         +  +R+K      + AT  ++F N        + V     E+ K  I 
Sbjct: 309 IPR------DENVETKRIKTSYSTAA-ATTFIQFDNV------KVPVENLLGEEHKGFIV 355

Query: 318 LDSAI------MSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + S        M+ S +   R  + E + +A +R V G  LI QPV+++ +A +   + A
Sbjct: 356 IMSNFNHERWAMTCSVIRWGRTVVEECLKWANQRIVFGKPLISQPVIRQKLAKMISLVEA 415

Query: 369 ATA----LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGS 422
           + +    +++++ N   E +S+        +  PI   K +  + A  +  +A+   GG 
Sbjct: 416 SQSWLETITYQMCNMSYEEQSK-------HLGGPIGLLKSYATRCAHDIADDAVNIFGGR 468

Query: 423 GYIEE---RSIARHYRESPANSILLGS 446
           G  +    R + + +R    ++IL G+
Sbjct: 469 GLTQTGMGRVVEQFHRTYKFDAILGGT 495


>gi|228928152|ref|ZP_04091196.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228831569|gb|EEM77162.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 395

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 253

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 254 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 313

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 314 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|295836738|ref|ZP_06823671.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295826183|gb|EDY44542.2| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 390

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 132/318 (41%), Gaps = 50/318 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQK 220
           V L  T    ++W P++ + E             +    GLTE   G+D     T+    
Sbjct: 100 VHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVLD 146

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 147 EARDEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGSPRISSIIVP----SGTP-GFT 201

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+L          + L  LD   ++++ +
Sbjct: 202 VAAPYSKVGWNASDTRELSFQDVRVPKANLLGELGRGY-----AQFLRILDEGRVAIAAL 256

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD+ L  A    LS+R      +A
Sbjct: 257 ATGLAQGCVDESVAYAKERHAFGKPIGANQAIQFKIADMELR-AHTARLSWR------DA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     +A +  GG G++ E  +AR +R+  A  + 
Sbjct: 310 ASRLVRGEPFKKEAALAKLYSSTVAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILE 367

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 368 IGEGTSEVQRMLIARELG 385


>gi|224368114|ref|YP_002602277.1| Acd3 [Desulfobacterium autotrophicum HRM2]
 gi|223690830|gb|ACN14113.1| Acd3 [Desulfobacterium autotrophicum HRM2]
          Length = 382

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 47/271 (17%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           P+ +     G GLTE   G+D     S+   + DG  + ++G K F+++   D   +   
Sbjct: 113 PLCRGEKVWGFGLTEPTAGSDAGG--SRTTAVQDGDDWVINGSKIFITNAACD-MTLGVT 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS---NATVELEFSNTFGFLLGDLNVS 305
           V+ + G      + ++G P   C+    +  G ++   +  +    SNT      D+ V 
Sbjct: 170 VQAKTG------IRDNGKPEYTCFIVEADTPGFKAVPMHKKMMWRASNTAELYFDDVRV- 222

Query: 306 TGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
             P E++         ++L  LD   +S+  M +  A+     A+ YA+ R        +
Sbjct: 223 --PKENILGKRGDGFHQMLKTLDGGRLSIGAMGLGGAQGAYDLALAYAKERQ-----QFN 275

Query: 352 QPVMK-RAIA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           QP+ K +AIA    D A++I  A  L ++      E +    EAA A++       +C +
Sbjct: 276 QPISKFQAIAFKLADCAMEIECARNLMYKACWLRSENRPFEREAAMAKL-------YCSE 328

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +   V   A++  GG G ++E ++ R YR+ 
Sbjct: 329 LMGRVANHAVQIHGGYGLMKEYNVERFYRDQ 359


>gi|29831569|ref|NP_826203.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29608685|dbj|BAC72738.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 385

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 23/282 (8%)

Query: 176 PKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           P I S   D   +  +P+ K        L+E   G+D A + ++  +  D  Y L+G K 
Sbjct: 103 PVILSGSEDLKKRYLSPLAKGDAMFSYALSEPDAGSDAAGMKTRAVRDGDS-YVLNGVKR 161

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++ +SD + ++A  +       +   + + +  G+ +   + K+G + + T E+   
Sbjct: 162 WITNAGVSDYYTVMAVTDPTKRSKGISAFVVEKADEGVSFGAPEKKLGIKGSPTREVYLD 221

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           N       ++G+    TG    MK    LD   ++++   + +A+     A  Y + R  
Sbjct: 222 NVRIPADRMIGEEG--TGFATAMKT---LDHTRITIAAQALGVAQGALDYAKGYVQERKQ 276

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A+ I AA  L++  A     AKS   +           K + 
Sbjct: 277 FGKAIADFQGIQFMLADMAMKIEAARQLTYAAA-----AKSERGDKDLT-FQGAAAKCFA 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A  V  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 331 SDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|21224222|ref|NP_630001.1| acyl-coa dehydrogenase RedW [Streptomyces coelicolor A3(2)]
 gi|256784696|ref|ZP_05523127.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
 gi|289768582|ref|ZP_06527960.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
 gi|2815365|emb|CAA16488.1| acyl-coa dehydrogenase RedW [Streptomyces coelicolor A3(2)]
 gi|289698781|gb|EFD66210.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
          Length = 391

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D   + ++ + + DG + LSG K F++ +P++D F++ A  + R G F +  
Sbjct: 129 ITEPEAGSDALHLRTRARPVDDG-HVLSGSKCFITNAPVADVFVVQAATDPRGGFFGLTT 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            L + S  GL   R  +K+G R + T ++ F + +
Sbjct: 188 FLVEASTPGLTVGRPYDKVGLRGSPTADVHFDDCY 222


>gi|53722471|ref|YP_111456.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76818344|ref|YP_335630.1| isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126443500|ref|YP_001063051.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           668]
 gi|134282640|ref|ZP_01769344.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           305]
 gi|167724078|ref|ZP_02407314.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           DM98]
 gi|167743056|ref|ZP_02415830.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           14]
 gi|167820227|ref|ZP_02451907.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           91]
 gi|167898666|ref|ZP_02486067.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           7894]
 gi|167916818|ref|ZP_02503909.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           112]
 gi|167923196|ref|ZP_02510287.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           BCC215]
 gi|217425365|ref|ZP_03456859.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|237508291|ref|ZP_04521006.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254185266|ref|ZP_04891855.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|254186766|ref|ZP_04893282.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254263446|ref|ZP_04954311.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
 gi|52212885|emb|CAH38919.1| putative acyl-coA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76582817|gb|ABA52291.1| isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126222991|gb|ABN86496.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           668]
 gi|134246197|gb|EBA46287.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           305]
 gi|157934450|gb|EDO90120.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184215858|gb|EDU12839.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|217391616|gb|EEC31644.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|235000496|gb|EEP49920.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254214448|gb|EET03833.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
          Length = 393

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +      Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVGMKLRAEP-RGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S             I   +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDAGGSAHPRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|223038955|ref|ZP_03609247.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Campylobacter rectus RM3267]
 gi|222879928|gb|EEF15017.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Campylobacter rectus RM3267]
          Length = 378

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +   K  DG   L+G K F++S     +I++   + +    +    
Sbjct: 124 ITEPGAGSDVGSLKTTYTK-KDGKVYLNGQKCFITSSAHTPYIVVMARDSQSEKPIFTEW 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             D S  G+    L +K+G R ++        VELE  + FG      N      +  + 
Sbjct: 183 FVDMSKPGIKLTPL-DKLGLRMDSCCEIVFDNVELEEKDVFGEYGNGFNRVKEEFDAERF 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A  +      +  +A  YA +R   G  +    +++   A +A+ + A   + +
Sbjct: 242 LV----ACTNYGIAYCAFEDAAKYANQRVQFGETIGRTQLIQEKFAHMAMRLNAMKYMVY 297

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D+  + + E+A       + K++C   A AV+ +A++ +GG G    R ++R +
Sbjct: 298 STAWKMDQGLNVTGESA-------MCKFYCANNAFAVVDDAIQVLGGIGVTGHR-VSRFW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDLRVDRLSGGSDEMQIL 367


>gi|254477734|ref|ZP_05091120.1| glutaryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031977|gb|EEB72812.1| glutaryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 406

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++ +K +DG Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAEK-TDGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++ + ++     GL   ++ NK   R++ T E+      G  +G+ +     VE +K  
Sbjct: 207 FVLEKGMK-----GLSAPKIGNKASLRASITGEIVMD---GVEVGE-DALLPHVEGLKGP 257

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AE     A  Y   R   G  L +  + +  +A++  +I   
Sbjct: 258 FGCLNRARYGISWGAMGAAEFCWHAARQYGLDRKQFGRPLANTQLFQLKLANMQTEITLG 317

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              S ++    D A +  E       M  I K   C  A  +   A +  GG+G   E  
Sbjct: 318 LQASLQVGRLMDAANAAPE-------MISIVKRNNCGKALEIARNARDMHGGNGISLEFG 370

Query: 430 IARH 433
           + RH
Sbjct: 371 VIRH 374


>gi|148679021|gb|EDL10968.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_b [Mus musculus]
          Length = 447

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + ++ +   S+  Y LSG K W  +SP++D FI+ A+ E      +
Sbjct: 186 FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNC---I 242

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              +LE G   GL   R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 243 RGFILEKGM-RGLSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 297

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 298 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 355

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 356 LHACLQLGRLKDQDKATPE-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYH 408

Query: 430 IARH 433
           + RH
Sbjct: 409 VIRH 412


>gi|148679020|gb|EDL10967.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Mus musculus]
          Length = 454

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + ++ +   S+  Y LSG K W  +SP++D FI+ A+ E      +
Sbjct: 193 FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNC---I 249

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              +LE G   GL   R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 250 RGFILEKGM-RGLSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 304

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 305 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 362

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 363 LHACLQLGRLKDQDKATPE-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYH 415

Query: 430 IARH 433
           + RH
Sbjct: 416 VIRH 419


>gi|85713881|ref|ZP_01044870.1| Acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85699007|gb|EAQ36875.1| Acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 411

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++T++  K  D  Y L+G K W  +  +++  ++ A+ +   G   +
Sbjct: 152 LAMSEPGAGSDVVSMTTRADKKGD-RYVLNGSKMWITNGTIAETLVVYAKTDTAAGARGI 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LGD       +  M  L
Sbjct: 211 TAFIVEKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEDNVLGDAGHGVSVL--MSGL 268

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++      M+  +   + Y   R   G  +    +++  +AD+ + + A  A 
Sbjct: 269 DY-ERAVLAAGPLGIMQACMDIVMPYVHERKQFGQPIGSFQLVQAKVADMYVTMNACRAY 327

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  +   E+AA A I+    K   C +      +A++ +GG+GYI +    R
Sbjct: 328 VYAVAKACDRGEITREDAAGA-ILYSAEKATQCAL------DAIQLLGGNGYINDYPAGR 380

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 381 LLRDAKLYEI--GAGTSEIRRML----IGRELFEK 409


>gi|111017431|ref|YP_700403.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110816961|gb|ABG92245.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 43/281 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIML 246
           P   T   IG + ++E   G+D+ AI  Q   ++DG  + ++G K F++S  ++D  I+ 
Sbjct: 115 PGFVTGETIGAIAMSEPAAGSDLRAI--QTTAVADGDTWVINGSKTFITSGILADIVIVF 172

Query: 247 AQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------- 294
           A+ +   G  G  L   ++EDG+P G    R  +K+G  +  T EL F +          
Sbjct: 173 AKTDVSAGSRGFSLF--VVEDGTP-GFSRGRKLDKLGLHAQDTAELFFEDVRIPKENLLG 229

Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                F +L+  L     P+E + I I    +  +V G        + Y + R   G  +
Sbjct: 230 EVGSGFAYLMQSL-----PLERLGIGIAAQVSAEAVLGW------TLDYVKERTAFGKRI 278

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D   M   +A++   +  + A   R     +     + +AA A       K W  ++  
Sbjct: 279 GDFQGMGFTLAELQTAVEVSRAYIDRCVREHNAGTLTAVDAAKA-------KLWATELQG 331

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            VI   ++  GG GY+ E  +A+ Y ++    I  G+   M
Sbjct: 332 RVIDAGVQFHGGYGYMMEYPVAKAYIDARIQRIYGGTNEIM 372


>gi|110632946|ref|YP_673154.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110283930|gb|ABG61989.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 380

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 18/260 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA+T++  +  D  Y ++G K F+S   +    ++    G  G   +  L
Sbjct: 124 LTEPGSGSDAAALTTRAIRDGDD-YVVTGQKQFISGAGAAGVYIVMVRTGGDGPKGISAL 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           +      GL +   ++K+G  +  T         +  +N  G       ++   ++  + 
Sbjct: 183 VIPADTPGLSFGANEHKMGWNAQPTRAVVLDGARVPVANRLGAEGDGFKIAMAGLDGGR- 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A+ Y R R   G  LI+   ++  +AD+A ++ A     +
Sbjct: 242 ---LNIAAASLGGAQAAFEKAVAYMRERRAFGQALINFQALQFHLADMATELEACRTFLW 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A + +       +A  A  +  + K         V  +A++  GG GY+ E  + +  
Sbjct: 299 RAAEALE------RKAPDATRLCAMAKRLVTDRCFEVANKALQLHGGYGYLAEYGMEKIV 352

Query: 435 RESPANSILLGSGNAMVLDV 454
           R+   + IL G+   M + V
Sbjct: 353 RDLRVHQILEGTNEIMRMIV 372


>gi|320007330|gb|ADW02180.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 404

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 45/304 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
           TP    +W P+ +  E DP   A            ++E + G+D++A+ ++ +   +   
Sbjct: 104 TPDQLAEWVPQCYGDEDDPKVAA----------FCVSEPQAGSDVSAMATRARYDEARDE 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  +  +++  +++A V+  +G      F+VP         GL   R   K+
Sbjct: 154 WVLAGQKAWITNGGIAEIHVVVASVDPTLGARGQAAFIVPP-----GTRGLEAGRTVKKL 208

Query: 280 GNRSNATVELEFSNT---FGFLLG-----DLNVST----GPVEDMKILIYLDSAIMSVSG 327
           G R++ T ++   +       LLG     D  ++     G  +    +   + +  +V  
Sbjct: 209 GLRASHTADVFLDDVRVPGHCLLGGKEKLDRRLARAREGGTAKGQAAMATFEVSRPTVGA 268

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A A     + YA  R   G  +I+   +  A+ADI  +I A   L ++ A     
Sbjct: 269 QALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLLIWQAAW---- 324

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +R++ A +      ++K    ++A A   +A++ +GG+GY  E  + R YR++   +I
Sbjct: 325 -MARNDRA-FDAGQGSMSKLRAGELAVAATEKAVQILGGAGYSREHPVERMYRDAKIYTI 382

Query: 443 LLGS 446
             G+
Sbjct: 383 FEGT 386


>gi|302521666|ref|ZP_07274008.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302430561|gb|EFL02377.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 472

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 50/312 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQK 220
           + L  T    ++W P++ + E             +    GLTE   G+D     T+    
Sbjct: 100 IHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVLD 146

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            +   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G  
Sbjct: 147 EATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISSIIVP----SGTP-GFT 201

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F +       LLG+L          + L  LD   ++++ +
Sbjct: 202 VAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGY-----AQFLRILDEGRVAIAAL 256

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  +     ++  IAD+ L      A + RL  S+ +A
Sbjct: 257 ATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMEL-----RAHTARL--SWRDA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     +A +  GG G++ E  +AR +R+  A  + 
Sbjct: 310 ASRLVRGEAFKKEAALAKLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILE 367

Query: 444 LGSGNAMVLDVL 455
           +G G + V  +L
Sbjct: 368 IGEGTSEVQRML 379


>gi|261205528|ref|XP_002627501.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592560|gb|EEQ75141.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 516

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 40/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +   K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 249 LAVTEAFAGSDVAGIRTTATKTPDGKHYIINGTKKWITNGMWADYFVTACRTEKGFSVIL 308

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR         +  +R+K      + AT  ++F N        + V     E+ K  I 
Sbjct: 309 IPR------DENVETKRIKTSYSTAA-ATTFIQFDNV------KVPVENLLGEEHKGFIV 355

Query: 318 LDSAI------MSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + S        M+ S +   R  + E + +A +R V G  LI QPV+++ +A +   + A
Sbjct: 356 IMSNFNHERWAMTCSVIRWGRTVVEECLKWANQRIVFGKPLISQPVIRQKLAKMISLVEA 415

Query: 369 ATA----LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGS 422
           + +    +++++ N   E +S+        +  PI   K +  + A  +  +A+   GG 
Sbjct: 416 SQSWLETITYQMCNMSYEEQSK-------HLGGPIGLLKSYATRCAHDIADDAVNIFGGR 468

Query: 423 GYIEE---RSIARHYRESPANSILLGS 446
           G  +    R + + +R    ++IL G+
Sbjct: 469 GLTQTGMGRVVEQFHRTYKFDAILGGT 495


>gi|228959325|ref|ZP_04121020.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228800395|gb|EEM47317.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 382

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMTPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGNVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYSVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|197105143|ref|YP_002130520.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478563|gb|ACG78091.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 379

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  +    G Y L+G K F+S +  SD ++++A+  G     +   
Sbjct: 124 LTEPGAGSDAASLQTSARS-DGGEYVLNGSKAFISGAGTSDVYVVMARTGGEGAGGVSTF 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
           ++E  +P GL +   + K+G  +  T  + F N     + + N      +  KI +    
Sbjct: 183 VVEKDTP-GLSFGAQERKMGWNAQPTALVHFDNC---RVPEANRVGDEGQGFKIAMAGLD 238

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++ A  S+ G  ++   A  +   R   G  L +   ++  +AD+A ++ AA  +  
Sbjct: 239 GGRINIASCSLGGAALAFDTAKAHLETRRQFGRALREFQGLQWRLADMATELEAARLMVR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D    ++ +         + K +       V  +A++  GG GY+ +  + R  
Sbjct: 299 RAAHALDNKDPKATQ------YCAMAKRFATDAGFEVANQALQLHGGYGYLRDYPLERIV 352

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 353 RDLRVHQILEGANEVM 368


>gi|41409490|ref|NP_962326.1| FadE25_4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118462363|ref|YP_883384.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254776678|ref|ZP_05218194.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|41398321|gb|AAS05942.1| FadE25_4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118163650|gb|ABK64547.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 389

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRARADGDD-WILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISS 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHKDDEGFTVGPKEKKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKVESARLMVYH 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +S      +   ++  +K     +A  V  +A++  GG GY ++  + R  R
Sbjct: 311 AAARAERGES------HLGFISAASKCLASDVAMEVTTDAVQLFGGYGYTQDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|315445618|ref|YP_004078497.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263921|gb|ADU00663.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 389

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   SD + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRAKADGDD-WILNGAKCWITNGGKSDWYTVMAVNDPDKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHVDDEGFSIGPKERKLGIKGSPTTELYFENCR--IPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIEYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYS 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AA-----ARAERGEGNLGFISAA-SKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|300704073|ref|YP_003745675.1| acyl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299071736|emb|CBJ43060.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 622

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 71/320 (22%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G       Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGASPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGVKGISLFIVPKFLVNADGSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335
                     +   G+L+G+      P + +  + ++ +      GM  ++        A
Sbjct: 284 RPRGPDGQPCAGAIGYLVGE------PHKGLACMFFMMNEARIGVGMGATMLGYTGYLHA 337

Query: 336 IHYARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + YAR R     +             ++D   ++R +      +  A  L+   A   DE
Sbjct: 338 LDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397

Query: 383 AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +  ++ A  AR      I+ PI K W  +      + A++  GG GY  E ++ + YR+
Sbjct: 398 ERGETDPAVRARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRD 457

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +  N I  G+     LD+L 
Sbjct: 458 NRLNPIHEGTHGIHGLDLLG 477


>gi|134081279|emb|CAK41785.1| unnamed protein product [Aspergillus niger]
          Length = 415

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 46/278 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K  DG Y L     KW  +   SD   M  +  G     +
Sbjct: 135 IAITEPEAGSDVANITTTATKTPDGKYYLVNGAKKWITNGIWSDFATMAVRTGGPGASGL 194

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
              LVP     G P G+  + LK   G  ++ T  +E        L D+ V   PVE+  
Sbjct: 195 SLLLVPL---KGHP-GVTMRPLK-VTGPITSGTTYIE--------LDDVKV---PVENLV 238

Query: 312 ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK--- 356
                 M++++       L  A+      RV+L+ A  Y  +R   G  L+DQPV++   
Sbjct: 239 GREGDGMRMIMTNFNHERLSIAVGVTRQARVALSTAFQYCLKREAFGKTLMDQPVVRNRL 298

Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIA 413
            RA A++    A    L ++L +   E   R      A A+  A +    C + A  +  
Sbjct: 299 ARAGAELETLGAFVEQLLYQLCHLSKEEGDRRLGGITALAKAKAGMVLNECAQCAILLFG 358

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A    GG G + E  +    RE PA  I  GS + ++
Sbjct: 359 GAGLTQGGQGELVESIL----REVPAARIPGGSEDVLL 392


>gi|148555076|ref|YP_001262658.1| isovaleryl-CoA dehydrogenase [Sphingomonas wittichii RW1]
 gi|148500266|gb|ABQ68520.1| isovaleryl-CoA dehydrogenase [Sphingomonas wittichii RW1]
          Length = 381

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 124/255 (48%), Gaps = 22/255 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           L ++E   G+D+ ++  +  +  D  Y L+G K W  ++  +D  ++ A+  EG  G  +
Sbjct: 126 LAMSEAGAGSDVVSMKLRADRKGD-RYILNGTKFWITNATYADTLVVYAKTGEGSRG--I 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              L+E G       Q++ +K+G R + T EL F +     + + NV       + +L+ 
Sbjct: 183 TTFLIEKGFKGFSIGQKI-DKVGMRGSPTAELVFDDC---EVPEENVMGPVGGGVGVLMS 238

Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD     ++G+++ + +A     + Y R R   G  +    +M+  +AD+ + + +A A
Sbjct: 239 GLDYERTVLAGIQLGIMQACLDTVLPYVRDRKQFGQPIGAFQLMQAKVADMYVALNSARA 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++   +AA A ++A        + A  V  EA++ +GG+GY ++  + 
Sbjct: 299 YVYAVAKNCDAGRTTRFDAAGAILLA-------SENAVKVANEAVQALGGAGYTKDWPVE 351

Query: 432 RHYRESPANSILLGS 446
           R+ R++    I  G+
Sbjct: 352 RYMRDAKLLDIGAGT 366


>gi|195487186|ref|XP_002091803.1| GE12038 [Drosophila yakuba]
 gi|194177904|gb|EDW91515.1| GE12038 [Drosophila yakuba]
          Length = 627

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 267

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 268 PPEKKMGIKASNTAEVYFEDVKIPVENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 324

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 325 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG GY+ +  + R  R+     I  G
Sbjct: 384 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGYMVDTGLERVLRDLRIFRIFEG 436

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 437 TNDILRL 443


>gi|330982171|gb|EGH80274.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 387

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 111/260 (42%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 SAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  E ++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALETIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|226349933|ref|YP_002777046.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226245848|dbj|BAH47115.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +   +  D  + L+G K F+++ + SD  I++A+ +        
Sbjct: 126 IAMTEPGTGSDLQGIKTTAVRDGDD-WILTGQKTFITNGIHSDVVIVVARTDPSARARGF 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG-------FLLGDLNV 304
             L+ +    G    R  +K+G     T EL F       SN  G       +L+  L  
Sbjct: 185 SLLVVERDMPGFTRGRKLHKVGLAGQDTAELSFDQVRVPGSNLLGTEGRGFLYLMEHL-- 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P+E   I      A+ S++G R +     +Y   R   G  + D    + A+A++  
Sbjct: 243 ---PLERTSI------AVTSITGARAAYEWTKNYVFERSAFGAPIGDLQNTRFALAEMLT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I    +   R   + +  +  + +AA A       K+W  ++   V+   ++  GG GY
Sbjct: 294 EIEVTQSHIDRCVLALNAGELTAVDAAKA-------KWWASELQKRVVDRCVQLHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  I R Y ++  ++I  G+   M
Sbjct: 347 MLEYPIGRAYVDTRVHTIYGGTTEIM 372


>gi|225865057|ref|YP_002750435.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus 03BB102]
 gi|225786223|gb|ACO26440.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus 03BB102]
          Length = 382

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNIRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYTVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|89896546|ref|YP_520033.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
 gi|89335994|dbj|BAE85589.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 379

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 129/277 (46%), Gaps = 36/277 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ- 248
            QK  +A  L +TE   G+D  ++T+   + +  +Y ++GHK F+S  + +D F+++ + 
Sbjct: 111 FQKGRLAFTLLITEPGAGSDNNSLTTTATRKNGKVY-INGHKTFISGAVEADYFLVMTRD 169

Query: 249 ----VEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNA-----TVELEFSNTFG 296
               V  + +  + VP+     +  G+  + ++ KIG    SN+      VE+E  +  G
Sbjct: 170 LSNPVPAQAMSMWWVPK-----NAKGITIEPVR-KIGWHALSNSEIYLDNVEVEEKDLIG 223

Query: 297 FLLGDLNVSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                     G ++ +K   +  L  A + +     +  +AIHYA +R   G  + +  +
Sbjct: 224 V------EGKGFIQLLKNFEMERLTLAAIVLGYAEAAFEDAIHYANQRMQFGKKIGEFQL 277

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  +AL I     + ++ A + D             I + + K +C + A  V+ +
Sbjct: 278 IQEKLTYMALKIENMRNMVYKGAWAKDNGLP-------VIIPSAMAKLYCAQSAFEVVDD 330

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           AM+ +GG GY E+  ++R +R++    +  G+   M+
Sbjct: 331 AMQVLGGIGYTEDHRVSRLWRDTRVYRLAGGTDQIMI 367


>gi|145224949|ref|YP_001135627.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315445280|ref|YP_004078159.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217435|gb|ABP46839.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315263583|gb|ADU00325.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 404

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 42/257 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVE------G 251
           LTE   G++ + + ++  +  DG    + L+G K F++ +P +D F+  A+         
Sbjct: 139 LTEPGAGSNPSGLRTKAVRDGDGPHSGWILNGQKRFITNAPNADLFVTFARSRPADDKGA 198

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TG 307
            +  FLVP         G+       K+G     T ++ F+        D+ V      G
Sbjct: 199 GIAVFLVP-----ADTPGVDIGAKDKKMGQEGAWTADVNFT--------DVEVPDTALVG 245

Query: 308 PVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             ED+     + S        A ++V   + +L E++ YA      G  + D  +++  +
Sbjct: 246 GSEDLGYRAAMTSLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAML 305

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD    + A  AL    A  +   + R       RI     K +C +MA  V   A++  
Sbjct: 306 ADQQTGVMAGRALVRDAARLWVTGQDR-------RIAPSAAKLFCTEMAGKVADLAVQIH 358

Query: 420 GGSGYIEERSIARHYRE 436
           GGSGY+ E  + R YR+
Sbjct: 359 GGSGYMREVPVERIYRD 375


>gi|15610276|ref|NP_217656.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis H37Rv]
 gi|15842716|ref|NP_337753.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31794316|ref|NP_856809.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium bovis AF2122/97]
 gi|121639023|ref|YP_979247.1| putative acyl-CoA dehydrogenase fadE23 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662995|ref|YP_001284518.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis H37Ra]
 gi|148824334|ref|YP_001289088.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis F11]
 gi|167970188|ref|ZP_02552465.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis H37Ra]
 gi|215413007|ref|ZP_03421708.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215432099|ref|ZP_03430018.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis EAS054]
 gi|215447430|ref|ZP_03434182.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T85]
 gi|218754918|ref|ZP_03533714.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|219559186|ref|ZP_03538262.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|224991515|ref|YP_002646204.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800174|ref|YP_003033175.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 1435]
 gi|254233761|ref|ZP_04927086.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis C]
 gi|254365766|ref|ZP_04981811.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552231|ref|ZP_05142678.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188181|ref|ZP_05765655.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|260202286|ref|ZP_05769777.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|260206479|ref|ZP_05773970.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289444704|ref|ZP_06434448.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|289448820|ref|ZP_06438564.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|289555414|ref|ZP_06444624.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 605]
 gi|289571351|ref|ZP_06451578.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|289575852|ref|ZP_06456079.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289755259|ref|ZP_06514637.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis EAS054]
 gi|289759269|ref|ZP_06518647.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis T85]
 gi|289763323|ref|ZP_06522701.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|294993119|ref|ZP_06798810.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis 210]
 gi|297635783|ref|ZP_06953563.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN 4207]
 gi|297732780|ref|ZP_06961898.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN R506]
 gi|298526614|ref|ZP_07014023.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777457|ref|ZP_07415794.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu001]
 gi|306782182|ref|ZP_07420519.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu002]
 gi|306786003|ref|ZP_07424325.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu003]
 gi|306790368|ref|ZP_07428690.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu004]
 gi|306794894|ref|ZP_07433196.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu005]
 gi|306799093|ref|ZP_07437395.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu006]
 gi|306804937|ref|ZP_07441605.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu008]
 gi|306809126|ref|ZP_07445794.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu007]
 gi|306969227|ref|ZP_07481888.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu009]
 gi|306973575|ref|ZP_07486236.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu010]
 gi|307081284|ref|ZP_07490454.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu011]
 gi|307085886|ref|ZP_07494999.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu012]
 gi|313660113|ref|ZP_07816993.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN
           V2475]
 gi|1781227|emb|CAB06275.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE23 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883037|gb|AAK47567.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619912|emb|CAD95256.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE23 [Mycobacterium bovis
           AF2122/97]
 gi|121494671|emb|CAL73152.1| Probable acyl-CoA dehydrogenase fadE23 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599290|gb|EAY58394.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis C]
 gi|134151279|gb|EBA43324.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507147|gb|ABQ74956.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis H37Ra]
 gi|148722861|gb|ABR07486.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis F11]
 gi|224774630|dbj|BAH27436.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321677|gb|ACT26280.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 1435]
 gi|289417623|gb|EFD14863.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|289421778|gb|EFD18979.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|289440046|gb|EFD22539.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 605]
 gi|289540283|gb|EFD44861.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289545105|gb|EFD48753.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|289695846|gb|EFD63275.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis EAS054]
 gi|289710829|gb|EFD74845.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|289714833|gb|EFD78845.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis T85]
 gi|298496408|gb|EFI31702.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214169|gb|EFO73568.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu001]
 gi|308325144|gb|EFP13995.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu002]
 gi|308329360|gb|EFP18211.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu003]
 gi|308333189|gb|EFP22040.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu004]
 gi|308336680|gb|EFP25531.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu005]
 gi|308340520|gb|EFP29371.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu006]
 gi|308344460|gb|EFP33311.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu007]
 gi|308348456|gb|EFP37307.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu008]
 gi|308353086|gb|EFP41937.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu009]
 gi|308357059|gb|EFP45910.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu010]
 gi|308361013|gb|EFP49864.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu011]
 gi|308364622|gb|EFP53473.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu012]
 gi|323718228|gb|EGB27408.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CDC1551A]
 gi|326902636|gb|EGE49569.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis W-148]
 gi|328459911|gb|AEB05334.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 4207]
          Length = 401

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L +  GR  +
Sbjct: 131 MAITEPEFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSLGRPAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL++K+G + + T  + F N     G LLG+  +  G   
Sbjct: 190 KSFIVPR-----EHPGVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGK-G 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMKRAIA-----DI 362
              ++   D+    V+ M V +  A     R  ++G    I  D+P   ++ A      +
Sbjct: 244 FAGVMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+       ++K    +MA  V  + +E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNNIPNSKEAS-------MSKAKAGRMASDVTCKTVELAGTT 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQSLLEKWARDSKILDIFEGT 380


>gi|229141725|ref|ZP_04270255.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST26]
 gi|229199151|ref|ZP_04325834.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1293]
 gi|228584422|gb|EEK42557.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1293]
 gi|228641793|gb|EEK98094.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST26]
          Length = 608

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|212533105|ref|XP_002146709.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072073|gb|EEA26162.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 454

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 26/255 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251
            G+TE   G D   + +   K SD  Y +SG K W   S ++   I+LA+          
Sbjct: 179 FGVTEPNTGLDTLKLKTTATKNSDNTYLVSGQKVWITCSQVASVMILLARTMSLEETQRP 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
             G  +    L+  +P GL  +R+K K+G R+    E+ F N       L+G  N     
Sbjct: 239 TEGLSMFAINLDRKNP-GLELKRIK-KMGGRAVDANEVFFDNYEIPADTLVGKAN----- 291

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI+++ +++    ++G  + L      +A  YA+ R V G  +     +   +AD 
Sbjct: 292 -DGFKIILHGMNAERCLLAGEALGLGYAALEKASLYAKERQVFGRPIGKNQAIAHPLADA 350

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGG 421
            + + AA   ++  A  +D +K+ S  ++ A   A    KY   + A      A+   GG
Sbjct: 351 YMRLEAAKLATYHAARMYDASKTDSSISSQAVGTACNSAKYLAAEAAYTACERAVMTHGG 410

Query: 422 SGYIEERSIARHYRE 436
            GY  E  + R  RE
Sbjct: 411 MGYAVEYDVERWLRE 425


>gi|21242224|ref|NP_641806.1| glutaryl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107646|gb|AAM36342.1| glutaryl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 391

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 16/237 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  +G + L+G K W  +  ++   I+ AQ +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGEG-WRLNGAKMWITNGSIAGLAIIWAQTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                     G     + +K+  R++ T  L   N F      L  + G    +  L   
Sbjct: 196 -----QTDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPQAAGLKAPLSCLNQA 250

Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L
Sbjct: 251 RYGIAWGAIGAAVACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               +    + E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 311 GRLKEAGTLQPEQVSLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|302539416|ref|ZP_07291758.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302448311|gb|EFL20127.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 396

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 49/320 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S+ AL  TP +        F RE       P       IG L ++++  G D+A++  + 
Sbjct: 97  SIQALAATPLLR-------FGREAQRRRYLPGMAAGTLIGALAVSDREAGADVASVGLEA 149

Query: 219 QKIS--DGIYCLSGHK-WFLSSPMSDAFIMLA---QVEGRVG--CFLVPRLLEDGSPNGL 270
            + +  DG Y L+G K W  +  ++D F+++A   Q  G +G   FLVP     G+P GL
Sbjct: 150 VRDADGDGSYVLNGRKAWIANGTIADVFVVIARTGQGPGPLGLSAFLVP----AGTP-GL 204

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             +R+ + I  RS A +  E       L  D  V   P +   + + L     +  G   
Sbjct: 205 RAERI-DAIAPRSFAHLSFEDCR----LPAD-AVLGRPGKGFVVAVDLLERFRTTVG--- 255

Query: 331 SLAEAIHYARR-----------RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             A A+ +ARR           R   G  L D  ++K ++AD+ + + AA  L  R A  
Sbjct: 256 --AAALGFARRAFDTALAHVLAREAYGATLFDLQLVKASLADMEVQLNAAALLVARAAWE 313

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D    R     +AR  + I K    + A  V+  A++ +G +G +E     R YR+  +
Sbjct: 314 TDRGSRR-----FAR-HSNIAKVHATEAAQGVVDTAVQLLGAAGIVEGSVTERLYRQIRS 367

Query: 440 NSILLGSGNAMVLDVLNLLE 459
             I  G+   + + +   L+
Sbjct: 368 LRIYEGTSEVLRMAIAGSLD 387


>gi|153011337|ref|YP_001372551.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563225|gb|ABS16722.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 391

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 31/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+EK  G+D+AA++   +   D  Y L G K W  +  ++D + + A+     G   +
Sbjct: 134 FALSEKLAGSDVAAMSCAARADGDD-YVLDGEKTWISNGGIADVYTVFARTGEAPGTRGI 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVE-----LEFSNTFGFLLGDLNVSTGPVEDMK 313
              +   +  G       + I     AT+      ++ S   G           P E  K
Sbjct: 193 SAFVVFATDPGFSIAERIDVIAPHPLATIRFDNCRIQASRRLG----------APGEGFK 242

Query: 314 IL-----IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I      I+  S   +  G  R + +EA+ +A+ R +  G L D  + +  + D+A DI 
Sbjct: 243 IAMRTLDIFRASVAAAALGFARRAASEALSHAQSRPMFSGALADLQLTQATLGDMATDID 302

Query: 368 AATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L++R A   D  K + ++EAA A+++A        + A   I +A++  GG G   
Sbjct: 303 AAALLTYRAAWRRDVQKLNTTKEAAMAKMVA-------TENAQQTIDKAVQMFGGRGVKS 355

Query: 427 ERSIARHYRESPANSILLGS 446
                R YRE  A  I  G+
Sbjct: 356 GEIAERLYREIRALRIYEGA 375


>gi|29828457|ref|NP_823091.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29605560|dbj|BAC69626.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 401

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 42/268 (15%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AI+S+  K  D  Y L+G K +L++  S   + +         EG      +   
Sbjct: 135 GSDVSAISSKAVKDGDE-YVLNGQKMWLTNGGSSNLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---- 311
           L +  P       GL      +K+G +   T EL        ++  L V    V      
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRVPANRVLGGTTG 245

Query: 312 ---MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
               +++  ++   ++V+     +A+      + YA++RH  G  +     ++  +A++A
Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           + +E  I R YRE+P   +L+G G A +
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEI 384


>gi|323528314|ref|YP_004230466.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385316|gb|ADX57406.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 393

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAQSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPQENILGQLN---GGVKVLMSG 244

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++   +G+ V++ +A+  Y   R   G  + +  +++  IAD+   + A  A 
Sbjct: 245 LDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKIADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D      E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGK--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|302529942|ref|ZP_07282284.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302438837|gb|EFL10653.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 403

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 29/263 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAIT+   +  D  Y L+G K F++S   +DA ++ A ++   G   +
Sbjct: 133 MAITEPGCGSDSAAITTTATQDGDD-YILNGEKIFVTSGQRADAVVVWATLDRTKGRAAI 191

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
              ++E G+P G    R+++K+G R++ T  L F N       LLG   + T       +
Sbjct: 192 KSFVVEKGTP-GFEVVRVEHKLGIRASDTAVLRFENCRVPRENLLGTPEIDTAK-GFAGV 249

Query: 315 LIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIA-----DIALDI 366
           +   D+    V+ M + +A  A+   RR     GI+I  D+P + +  A      +  D 
Sbjct: 250 MQTFDNTRPLVAAMAIGVARAALDETRRILTEAGIVIDYDRPSLTQHAAAATFLQLEADY 309

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSG 423
            AA  L+   A   D  +  S +A+ A+           K    V+   ++C+   G  G
Sbjct: 310 EAAYLLTLESAWMADNRQPNSLQASMAK----------AKAGRTVVDVTLKCVELAGAYG 359

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y EE  + +  R++    I  G+
Sbjct: 360 YTEESLLEKWSRDAKILDIFEGT 382


>gi|228934352|ref|ZP_04097191.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228946696|ref|ZP_04109004.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228812993|gb|EEM59306.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228825520|gb|EEM71314.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 395

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 253

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 254 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 313

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 314 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|108805083|ref|YP_645020.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766326|gb|ABG05208.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 390

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 29/259 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
             L+E   G+D+AA+++   +  D  Y + G K W  +  ++D + + A+     G   L
Sbjct: 125 FALSEPEAGSDVAAVSTTATEDEDH-YVIDGTKTWISNGGLADFYTVFARTGEAPGAKGL 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
              +++ G+P     +R+        +   +L+F N       ++G+      P +  +I
Sbjct: 184 SAFVVDAGTPGFEVAERIPVMA---PHPLAKLKFENVRVPKDRMIGE------PGQGFRI 234

Query: 315 LIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +       S  G       R +L EA+  A  R + G  + +  +++  +AD+AL + A
Sbjct: 235 AMATLDVFRSTVGAAALGFARRALDEALKRATNRELFGAPMSELQLVQGKLADMALGVDA 294

Query: 369 ATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  L +R A + D    R + EAA A++ A        + A  VI EA++  GG G    
Sbjct: 295 SALLVYRAAWTKDRIADRVTREAAMAKLHA-------TETAQRVIDEAVQIFGGLGVTSG 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R YRE  A  I  G+
Sbjct: 348 HPVERLYREIRALRIYEGA 366


>gi|46138871|ref|XP_391126.1| hypothetical protein FG10950.1 [Gibberella zeae PH-1]
          Length = 425

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 55/287 (19%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           PKI S +Y              +  G+TE   G D   + +  ++ SDG Y ++G K W 
Sbjct: 139 PKIISGDYR-------------VCFGVTEPNSGLDTLRLETTAKQNSDGSYSVTGQKIWI 185

Query: 235 LSSPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             + ++   I+LA+        +   G  L    L+   P GL  +++K K+G R+    
Sbjct: 186 TCAQVASKMILLARTTPLDQVKKSSEGLSLFCIHLDRTQP-GLTMRKIK-KMGGRAVDAN 243

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRV-----SLAEAIHY 338
           E+ F N       L+G+ N      +  K++++ +++    ++G  +     +LA+A  Y
Sbjct: 244 EVFFDNYQIPSSSLIGEQN------KGFKMILHGMNAERCLLAGEALGLGYAALAKASGY 297

Query: 339 ARRRHVSGGILIDQPV-MKRAI----ADIALDIAAATALSFRLANSFDEAKS----RSEE 389
           AR R     ++  +P+ M +AI    AD  + +  A   ++  A  +D++K+    R ++
Sbjct: 298 ARER-----VVFKRPIGMNQAIAHPLADAYMKLEGAKLATYHAARLYDQSKTDASVRQDD 352

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              A   A   KY   + A      A+   GG GY  E  + R +RE
Sbjct: 353 IGVA---ANSAKYMAAEAAFTACERAVLTYGGMGYAMEYDVERWFRE 396


>gi|195491150|ref|XP_002093438.1| GE21295 [Drosophila yakuba]
 gi|194179539|gb|EDW93150.1| GE21295 [Drosophila yakuba]
          Length = 420

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 40/267 (14%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           GL ++E   G+D+ ++  + ++  D  Y L+G K W  +   +D  I+ A+  G      
Sbjct: 158 GLAMSEPGAGSDVVSMKLRAERKGD-YYVLNGSKFWITNGSDADTLIVYARTGGSDVPDK 216

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV- 309
             +  F+V    E     G    +  +K+G R ++T EL F         DL V    + 
Sbjct: 217 HGITAFIVETAWE-----GFSVAQKLDKLGMRGSSTCELVFQ--------DLKVPAKNIL 263

Query: 310 --EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             E+  + + +          A   V  M+ +   A  YA +R     ++ +  +++  +
Sbjct: 264 GQENKGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFDYAHQRKQMNKLIGEFQLLQGKM 323

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   ++A  +  + +A + D A +RS +     I+      +  + A  V  +A++ +
Sbjct: 324 ADMYTSLSACRSYLYTVARACD-AGNRSPKDCAGVIL------YTAEKATKVALDAIQIL 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GYI E    R  R++    I  G+
Sbjct: 377 GGNGYINENPTGRILRDAKLYEIGAGT 403


>gi|162457086|ref|YP_001619453.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161167668|emb|CAN98973.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 374

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 26/259 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF 256
           +G  L+E   G ++  +  Q  + ++G Y L+G K F++    +D F   A  +G+   F
Sbjct: 124 VGNALSEPTSG-NMFLVPRQVARKAEGGYRLTGEKRFVTGCEHADFFFTAAVCDGQPAFF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L   L +D S   +  + + + +G R+  +  + F  T   L     ++  P     I  
Sbjct: 183 L---LDKDDS---IAIEPVWDTLGMRATRSQIVRFQGTL--LPESRRLAVDPTAPNPIPN 234

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATA 371
            L    +SV     ++A A  YA+ R +  G   D+P+     ++ A+AD++L + AA A
Sbjct: 235 GL--GWLSVGIAEAAMAAAGAYAKERVLPPG---DRPIAELQWVQFAVADMSLRLEAARA 289

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ R A + D     + + +Y  ++   +K    + A A+   A+E  GG+GY+  R I 
Sbjct: 290 LAMRTAAALD-----AGDPSYG-LLQLQSKVVANEAAVAIATSALEIAGGAGYMRSRPIE 343

Query: 432 RHYRESPANSILLGSGNAM 450
           RH R++ +  I+  SG A+
Sbjct: 344 RHLRDAMSGPIMALSGPAI 362


>gi|138893854|ref|YP_001124307.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134265367|gb|ABO65562.1| Acyl-coA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 17/278 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG   LTE   G++ AA+ +   +  D  Y ++G K ++++ + +  F ++A
Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAALKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +   + +    G     ++ K+G R + + EL F N       +LG    
Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFTIGNVERKMGLRGSHSAELFFDNLEVPVENVLG--KE 228

Query: 305 STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  +KIL    + + + + G  + L E  + YA +R   G  +I+Q  ++  +A++
Sbjct: 229 GEGYINALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++ I    +  +R+A   D+     +EAA       I K +  ++   +   A++  GG 
Sbjct: 289 SMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGGL 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+++  I R++R++    I  G+       + N L K
Sbjct: 342 GYMKDYPIERYFRDARITKIYEGTSEIQRNIIANELRK 379


>gi|169846951|ref|XP_001830189.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
 gi|116508772|gb|EAU91667.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
          Length = 425

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 24/251 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           + K  +    GLTE   G+D   + +  Q++ DG + L+G K W  ++P++D FI+ A+ 
Sbjct: 158 LAKGELVGAFGLTEPNHGSDPGGMETTAQEV-DGGFVLNGSKTWITNAPVADVFIVWARC 216

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +GRV  F    +LE G   GL    +KNK+  R++AT  +   N        L  S G
Sbjct: 217 KWDGRVRGF----ILEKGM-KGLTAPAIKNKVALRASATGSIFMDNVSVPHDALLPKSRG 271

Query: 308 PVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                     L+SA   +S      +   LA    YA  R+     L    ++++ + D 
Sbjct: 272 LSSAFSC---LNSARYGISWGVMGALEDCLARTREYALERYQFKRPLASFQLVQKKLVDA 328

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +IA     S ++    D+ K   E       M  + K   C  A       ++ +GG+
Sbjct: 329 HTEIALGLQSSLQVGRLKDQGKVAPE-------MISLVKRNNCGKALQHARILIDILGGN 381

Query: 423 GYIEERSIARH 433
              +E  + RH
Sbjct: 382 ASADEYHVGRH 392


>gi|254820013|ref|ZP_05225014.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 387

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 22/274 (8%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P +     P+ F +   P     M K   AI    TE  GG+D A             Y 
Sbjct: 107 PNIMFKATPEQFEKYARPVIDGIMSKAYTAI----TEASGGSDPARAIKLKATRDGSSYL 162

Query: 228 LSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           L+G K W   +P +D  ++ A+  EGR G  +   +LE G+P G+ + R+       S A
Sbjct: 163 LNGSKMWISHAPDADWGVVYARTGEGRHG--ISAFILEKGTP-GVTFSRIPVMA---SFA 216

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
             EL F N       L+G+         +  +   +  A   +   + +L  A  +AR R
Sbjct: 217 PYELHFDNVRLPTEQLIGEEGQGFSLAGEFLVHGRIVYAAGPIGIAQSALDMACRWARDR 276

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            V GG L D+  ++  + D  +D+ AA  L ++ A++ D  +         R+ A + K 
Sbjct: 277 DVFGGRLADKQGIQWMLVDSEVDLRAARLLMYQAASNADLGRD-------VRVDASVAKM 329

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +  + A  V+   ++  G  G   E  + R +R+
Sbjct: 330 FGTEAAYRVLDRCIQIHGALGISTELPLERWFRD 363


>gi|229158607|ref|ZP_04286666.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 4342]
 gi|228624921|gb|EEK81689.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 4342]
          Length = 608

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|218675397|ref|ZP_03525066.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 394

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D   + ++ +KI+ G Y L G K W  +SP++D F++ A+ E     +  
Sbjct: 136 FGLTEPDAGSDPGGMKTRAEKIAGG-YRLRGSKIWISNSPIADVFVVWAKSEAHNNEIRG 194

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+   +   T   LL  ++   GP    
Sbjct: 195 FVLEKGMK-----GLSAPKIGGKLSLRASITGEIVMDSVEVTEDALLPGVSGLKGP---- 245

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +I 
Sbjct: 246 --FGCLNRARYGISWGVMGAAEDCWFRARQYGLDRKQFGKPLAGMQLYQKKLADMMTEIT 303

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE +   E       M  I K   C  A  +  +A +  GG+G   E
Sbjct: 304 LGLQGSLRVGRLMDEHRMAPE-------MVSIVKRNNCGKALDIARQARDMHGGNGIQIE 356

Query: 428 RSIARH 433
             + RH
Sbjct: 357 YHVMRH 362


>gi|218904225|ref|YP_002452059.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH820]
 gi|218537341|gb|ACK89739.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH820]
          Length = 382

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|118480096|ref|YP_897247.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|228930034|ref|ZP_04093044.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229124544|ref|ZP_04253729.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 95/8201]
 gi|229187251|ref|ZP_04314396.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BGSC 6E1]
 gi|118419321|gb|ABK87740.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|228596261|gb|EEK53936.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BGSC 6E1]
 gi|228658884|gb|EEL14539.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 95/8201]
 gi|228829533|gb|EEM75160.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 608

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|34763803|ref|ZP_00144716.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC; ELECTRON TRANSFER
           FLAVOPROTEIN ALPHA-SUBUNIT; RUBREDOXIN [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886427|gb|EAA23689.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC; ELECTRON TRANSFER
           FLAVOPROTEIN ALPHA-SUBUNIT; RUBREDOXIN [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 479

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +++ +++ A     +G   +   + +    G  +    +K+G RS++T +L F+N     
Sbjct: 4   VAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---K 60

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           +   N+     +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q
Sbjct: 61  VPKENLLGKEGDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQ 120

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A  I  A  L +  A    E K   E       MA   K +   +A  V+
Sbjct: 121 QAISFKLADMATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVV 173

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 174 NDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 207


>gi|324517015|gb|ADY46704.1| Acyl coa dehydrogenase 6 [Ascaris suum]
          Length = 396

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 165 MTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           M TP +  D+      RE+  PT +  M        +G++E   G+D+AAI ++      
Sbjct: 108 MATPAL-ADFGSDALKREFLRPTIEGDMVSC-----IGVSEAYAGSDVAAIRTRAHWHGS 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +      +W  +   +D   +L      Q+  R    +  RL E G       +    K
Sbjct: 162 DMIINGSKQWITNGNQADWICLLVNTNDNQLLHRNKSLICVRLDEPGVHRSKSIE----K 217

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVS----GMRVSL 332
           +G  S+ T E+ F +     +   N+    G     ++L + D  +++++     M+  +
Sbjct: 218 LGMHSSDTAEIYFDSV---RVPSRNIIGEEGRGFVYQMLQFQDERLVAIAVLLEPMQRII 274

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              I Y R+R + G  ++D  V+   +A++  +I A  +L +R       A         
Sbjct: 275 DMTIDYTRQRRIFGKSVLDNQVVHYRLAELQTEIEAVRSLLYR-------AVMERLSGTD 327

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             ++A + K    ++A  +    ++  GG+GY  + +I+R++R+    SI  G    M+
Sbjct: 328 VTLLASMGKLKAGRLARTITDSCLQFWGGNGYTWDNAISRYHRDFRLFSIAAGCDEVML 386


>gi|307946916|ref|ZP_07662251.1| acyl-CoA dehydrogenase family protein [Roseibium sp. TrichSKD4]
 gi|307770580|gb|EFO29806.1| acyl-CoA dehydrogenase family protein [Roseibium sp. TrichSKD4]
          Length = 387

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 37/281 (13%)

Query: 186 TNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS 240
           T KA   P+ +   AI    LTE   G+D+A+ T       D  + L+G K W  +  ++
Sbjct: 109 TQKADWLPLTRQGKAIAAFALTEPHSGSDVASSTMTATVDGDD-FLLNGEKTWISNGGIA 167

Query: 241 DAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE-----LE 290
           D + + A+     G      F+VP      +P     +RL + I     AT+      + 
Sbjct: 168 DVYTVFARTGEAPGAKGLSTFIVPA----DTPGLEVVERL-DTIAPHPLATLRFTDCRIP 222

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGI 348
            SN  G       ++      M +L    S + +  +   R +L EA+    +R +    
Sbjct: 223 ASNLIGKRGAGFKIA------MSVLDVFRSTVAAAALGFARRALDEALDRVVKREIREKP 276

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKM 407
           L    +++  IAD+ALD+ AA  L +R A + D    R + EAA A       K +  + 
Sbjct: 277 LFALQMVQGHIADMALDVDAAALLVYRAAWTKDSGAPRVTREAAMA-------KLFSTEQ 329

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A  VI +A++  GG G     ++ + YRE  A  I  G+ +
Sbjct: 330 AQIVIDKAVQLHGGDGVRSGETVEKLYREIRALRIYEGASD 370


>gi|322436066|ref|YP_004218278.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163793|gb|ADW69498.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 381

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 29/259 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA------QVEGRV 253
           GLTE   G+D   + +   +  D  + L+G K F+++   ++  ++LA      +  G +
Sbjct: 123 GLTEPGSGSDAGGMRTTAVRRGD-EWVLNGGKTFITNGTYANCALVLAVTDKEKKTHGGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-M 312
             FLV R        G    + +NK+G R++ T EL F +        + V     +D M
Sbjct: 182 SAFLVER-----GTKGFRAGKKENKLGLRASDTAELIFEDCVVPAENLVGVEGAGFKDAM 236

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++L   D   +S++ + + +A      A+ YA  R   G  + +   ++  +A +A ++ 
Sbjct: 237 RVL---DGGRISIAALSLGIARGALDAAMKYATERRQFGKAISEFQAIQFKLATMATELD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+ R A   D  ++ + E++ A++ A        ++A  +  E ++  GG G+I++
Sbjct: 294 AAWLLTMRAARMKDAGENVTLESSMAKLYAS-------EVACRICDEGVQIHGGYGFIKD 346

Query: 428 RSIARHYRESPANSILLGS 446
               + YR+    +I  G+
Sbjct: 347 YPAEKFYRDVKLCTIGEGT 365


>gi|163800392|ref|ZP_02194293.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
 gi|159175835|gb|EDP60629.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 123/274 (44%), Gaps = 22/274 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L ++E   G+D+ ++  + +   D         W  + P +D  ++ A+     G   + 
Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDHFLMNGSKMWITNGPDADTIVVYAKTNPEGGSHGIS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             + + + +G  + +  +K+G R + T EL F N       LLG+LN     VE +   +
Sbjct: 190 AFIIERTFDGFSHAQKLDKLGMRGSNTCELVFKNCLVPKENLLGELNRG---VEVLMSGL 246

Query: 317 YLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
             +  +++      M+  L E + Y   R   G  + +  +++  +AD+   + AA A  
Sbjct: 247 DYERVVLAAGPLGIMQACLDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMNAAKAYV 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E +  R 
Sbjct: 307 YAVAAACDRGECMRKDAAGVIL-------YSAELATQMSLDAIQILGGNGYINEYATGRL 359

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            R++    I  G+G + +  +L     G  LFE+
Sbjct: 360 LRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|159042473|ref|YP_001541725.1| acyl-CoA dehydrogenase domain-containing protein [Caldivirga
           maquilingensis IC-167]
 gi|157921308|gb|ABW02735.1| acyl-CoA dehydrogenase domain protein [Caldivirga maquilingensis
           IC-167]
          Length = 379

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 32/295 (10%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           SRE        + K  +     LTE   G+D  AI ++  K   G + ++G K W  S  
Sbjct: 103 SREVRERFLEGLVKGDLIASFALTEPCCGSDAGAIETRAVK-DGGEWVINGRKAWVTSGQ 161

Query: 239 MSDAFIMLAQ---VEGR---VGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEF 291
            +D +++ A+   +E R   +  FLVPR        G C +      +G R   T E+  
Sbjct: 162 YADLYLVFARTGSIEERHRAITAFLVPR--------GGCIEVNPMGVMGIRGGGTAEVSL 213

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS 345
            +      + +G++N   G    M+ L  L    +   G+ ++     EA  YA+ R + 
Sbjct: 214 RDCRVPDEYRVGEVN--RGFYLAMEKL-NLGRTCVGAIGLGIAERAFTEAYDYAQVRRIY 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG L +  V++  +A +   + A   L +  A   D  K  SE   YA+      KY   
Sbjct: 271 GGTLAELGVIQGYLAQMYTQVEALRGLIYLTAYMRD--KGLSEFTKYAQA----AKYLGS 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             A  V   A++ +G  G   E  +   YR++ A  +  GS   ++  +  +L K
Sbjct: 325 STAVNVTRTAIQVMGAVGLSTESPLEYLYRDAKATEVYEGSNEVILYSLFKMLRK 379


>gi|108800595|ref|YP_640792.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869734|ref|YP_939686.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771014|gb|ABG09736.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695823|gb|ABL92896.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 46/260 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGR- 252
            GLTE  GG+D  A  +   ++ DG + ++G K F+++  +D   ++       +V+GR 
Sbjct: 128 FGLTEPGGGSDAGAPKTTA-RLDDGHWVINGSKQFITNSGTDITKLVTVTAVTGEVDGRK 186

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +   LVP   +     G   +   NK+G  ++ T  L F         D+ V   P E+
Sbjct: 187 EISSILVPVPTQ-----GFTAEPAYNKVGWNASDTHPLSFD--------DVRV---PEEN 230

Query: 312 M---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357
           +           L  LD   ++++ + V  A     E++ YA+ R   G  +     +  
Sbjct: 231 LLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAF 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA +      A A  +  A      K   ++AA A+++A        + A     +A +
Sbjct: 291 KIARMEARAHTARAAYYDAAALMLSGKPFKKQAAIAKLVA-------SEAAMDNARDATQ 343

Query: 418 CIGGSGYIEERSIARHYRES 437
             GG G++ E  +ARHYR+S
Sbjct: 344 IFGGYGFMNEYPVARHYRDS 363


>gi|78065944|ref|YP_368713.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77966689|gb|ABB08069.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 609

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 65/315 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSS---PMSDAFI--MLAQV--- 249
           L+E + G+ ++ I ++     D      Y L+G+K ++S     +++  I  +LA++   
Sbjct: 163 LSEPQAGSSLSDIATRADFEGDSPLGPRYRLTGNKMWISGGEHELTENIIHLVLAKIPDE 222

Query: 250 EGR-------VGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L        G  N +    L +K+G R      L F     
Sbjct: 223 HGRLLPGTRGISLFIVPKYLPGADGAAQGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   G+L+G  N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 283 YRPEGRAGAIGYLVGQANHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     +             +++ P ++R +      +    AL    A   DEA++  
Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVEHPDVRRMLLAQKSYVEGGLALILYCAKLVDEARAHD 397

Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    A       I+ PITK W  +   A    A++  GG GY  + ++ R YR++  N 
Sbjct: 398 DADVRAHATRLLDILTPITKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     LD+L 
Sbjct: 458 IHEGTHGIQALDLLG 472


>gi|26341718|dbj|BAC34521.1| unnamed protein product [Mus musculus]
          Length = 413

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 41/277 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G     C
Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISC 215

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLN 303
            +V    E G+P GL + + + K+G  S  T  + F +              GFL+    
Sbjct: 216 IVV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVPNRIGTEGQGFLIAMKG 270

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G +         + A  S+     S+     + + R   G  L     ++  +AD+A
Sbjct: 271 LNGGRI---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMA 321

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+  L  R A     A +  EE   A  +  + K +  +   A+  +A++  GG G
Sbjct: 322 TKLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYG 375

Query: 424 YIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           Y+++ ++ ++ R+S  + IL GS   M +L   NLL+
Sbjct: 376 YLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 412


>gi|326388272|ref|ZP_08209875.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207438|gb|EGD58252.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 394

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +K + G Y LSG K W  ++P++D FI+ A+ +   G  + 
Sbjct: 137 FGLTEPDAGSDPAGMRTRAEKTATG-YRLSGAKTWISNAPIADVFIVWAKSDAHGGA-IR 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIY 317
             +LE G   GL   ++  K+  RS+ T  ++        +G+  +  G VE +K     
Sbjct: 195 GFILEKGMA-GLVAPKIGGKLSLRSSITGMIQMDAV---EVGEDALLPG-VEGLKGPFGC 249

Query: 318 LDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+ A   +S   +  AE  +H AR+    R   G  L    + ++ +AD+  +I      
Sbjct: 250 LNRARYGISWGALGAAEFCLHAARQYGLDRKQFGRPLAATQLYQKKLADMMTEITLGLQA 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S R+    DE +       +A  M  I K      A  +   A +  GG+G  EE  + R
Sbjct: 310 SLRVGRLMDEGR-------FAPEMVSIVKRNNVGKALDIARMARDMHGGNGISEEYQVMR 362

Query: 433 H 433
           H
Sbjct: 363 H 363


>gi|302550412|ref|ZP_07302754.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302468030|gb|EFL31123.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 394

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 19/260 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D A++ +  ++  DG  + L+G K W  
Sbjct: 117 FGSEEQKQQWLPRMAAGDVIGCFGLTEPDHGSDPASMRTHAKR--DGTDWVLNGRKMWIT 174

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ AQ E  +  F+VP         G     +K+K   R++ T EL   +  
Sbjct: 175 NGSVAGVAVVWAQTEDGIRGFVVPT-----DSAGFSAPEIKHKWSLRASVTSELVLDDVR 229

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L +    I+  ++   R S   A+ YA+ R   G  +    
Sbjct: 230 LPAAAVLPEGTGLRGPLSCLSHARYGIVWGAMGAARSSFEAAVDYAKSREQFGRPIGGFQ 289

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +  
Sbjct: 290 LTQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI-- 347

Query: 414 EAMECIGGSGYIEERSIARH 433
                +G +G   E  + RH
Sbjct: 348 -----LGANGISLEYPVMRH 362


>gi|254515733|ref|ZP_05127793.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219675455|gb|EED31821.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 31/300 (10%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + SM+    +  V + W P +            M KT  +    LTE   G+D A++ ++
Sbjct: 93  ATSMIGRYCSAAVIEQWCPDLV-----------MGKTLAS--YCLTEPGAGSDAASLRTR 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             K  D  Y ++G K F+S       +++    G  G   +  LL      G+ Y + + 
Sbjct: 140 ADKDGDD-YLVNGSKVFISGAGETDVLVVMLRTGDGGPKGITALLIPADAPGITYGKKEE 198

Query: 278 KIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G  +  T  + F N         G       ++   ++  +I I    A  SV   + 
Sbjct: 199 KMGWNAQPTRMISFDNVRVPQANRLGAEGQGFAIAMEGLDGGRINI----ATCSVGTAQQ 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L EA  Y   R   G  + +    +  +AD+  ++ AA  +  RLA S  + K      
Sbjct: 255 ALQEAAAYVAEREQFGQAIAEFQATQFRLADMLTEVVAARQM-VRLAASKLDRKD----- 308

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A     + K +   +   V  +A++  GG GYI E  + RH R++  + IL G+   M
Sbjct: 309 AQASTYCAMAKRFATDLGFRVCNDALQLFGGYGYIREYPMERHLRDTRVHQILEGTNEIM 368


>gi|194207390|ref|XP_001497106.2| PREDICTED: similar to long-chain acyl-CoA dehydrogenase [Equus
           caballus]
          Length = 439

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 22/274 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++  +SD  I++
Sbjct: 163 PQMTAGRCIGAIAMTEPGAGSDLQGVRTNARK--DGSDWILNGSKVFITNGWLSDVVIVV 220

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E R     +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 221 AVTDREARSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGE 280

Query: 302 LNVS----TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            N         +  ++ LI+ L  A + +S       E   Y ++R   G  +     ++
Sbjct: 281 ENKGFYYLMRELPQVRNLIFGLLIADLGISASEFMFEETRTYVKQRKAFGKTVAHLQTVQ 340

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   I    A         D      E        A + KYW  ++  +V  + +
Sbjct: 341 HKLAELKTHICVTRAF-------VDSCLQLHEAGRLDSATASMAKYWTSELQNSVAYDCV 393

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 394 QLHGGWGYMWEFPIAKAYVDARVQPIYGGTNEIM 427


>gi|30265048|ref|NP_847425.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530551|ref|YP_021900.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187864|ref|YP_031117.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|49481065|ref|YP_039027.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|167634900|ref|ZP_02393218.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167639944|ref|ZP_02398212.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170685801|ref|ZP_02877024.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170707013|ref|ZP_02897470.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177652271|ref|ZP_02934774.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190567109|ref|ZP_03020024.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196032772|ref|ZP_03100185.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|206976381|ref|ZP_03237288.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|222098455|ref|YP_002532513.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|229601520|ref|YP_002869246.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687340|ref|ZP_05151197.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254725353|ref|ZP_05187136.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735323|ref|ZP_05193031.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740589|ref|ZP_05198280.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254761492|ref|ZP_05213513.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30259725|gb|AAP28911.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47505699|gb|AAT34375.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181791|gb|AAT57167.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|49332621|gb|AAT63267.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|167512025|gb|EDR87403.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167529650|gb|EDR92399.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170128116|gb|EDS96986.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170670265|gb|EDT21005.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082277|gb|EDT67343.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190561613|gb|EDV15583.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|195994201|gb|EDX58156.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|206745305|gb|EDZ56705.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|221242514|gb|ACM15224.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|229265928|gb|ACQ47565.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 594

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|229062672|ref|ZP_04199981.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH603]
 gi|229169725|ref|ZP_04297425.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH621]
 gi|228613764|gb|EEK70889.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH621]
 gi|228716642|gb|EEL68339.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH603]
          Length = 608

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|227822701|ref|YP_002826673.1| putative acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227341702|gb|ACP25920.1| putative acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 475

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
           L +TE   G+D+  +    +   D  + ++G K F+S      F+++    G        
Sbjct: 211 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 269

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
             ++ CFLV R    G+P G   +   N + +R      L F +       +LG+++   
Sbjct: 270 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSSQILGEVHKGF 324

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D      L  A  SV   R +   A+ YA  R   G  +     +   +AD+  +I
Sbjct: 325 DIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPIGANQGVSFKLADMITEI 384

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A   D     + E A A++ A        +M   V  EA++  GG G ++
Sbjct: 385 DAADLLTLSAAWRLDHGLPSNREIASAKVFA-------TEMLARVTDEAIQIFGGMGLMD 437

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 438 DLPLARFWRDARVERIWDGT 457


>gi|170740557|ref|YP_001769212.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194831|gb|ACA16778.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 390

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G K W  + P+++  ++ A+ + + G   +
Sbjct: 131 LAMSEPGSGSDVVSMRTRAEKRGD-RYVLTGSKMWITNGPVAETLVVYAKTDPQAGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLVEKGMKGFTTAQKLDKLGMRGSDTCELVFEECEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  L  A+ Y   R   G  + +  +++  +AD+ +   AA A
Sbjct: 250 ERAVL----AAGPLGIMQACLDVALPYVHERKQFGQPIGEFQLVQGKLADMYVSTNAAKA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|228968120|ref|ZP_04129124.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228791555|gb|EEM39153.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 588

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 103 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 155

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 156 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 210

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 211 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 268

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 269 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 328

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 329 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 387

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 388 MYRDSRINRIFEGT 401


>gi|126667851|ref|ZP_01738817.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein
           [Marinobacter sp. ELB17]
 gi|126627667|gb|EAZ98298.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein
           [Marinobacter sp. ELB17]
          Length = 383

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 122/308 (39%), Gaps = 40/308 (12%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           AL T   VH D      S   +   K    P   +  A+G + +TE   G+D+ A+ ++ 
Sbjct: 84  ALSTNVMVHSDIVAPYLSHLGNDEQKQQWLPKMVSGEAVGAIAMTEPGAGSDLQAMRTRA 143

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y L+G K F+++   +D  I+ A+ +   G   V   L D +  G    R  +
Sbjct: 144 VKEGDD-YILNGSKTFITNGQHADMVIVAAKTDPSAGAKGVSLFLVDTTLEGYGVGRNLD 202

Query: 278 KIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           KIG  +  T EL F++               F +L+ +L     P E + I        +
Sbjct: 203 KIGQHAGDTSELFFADMRVPASALLGEAGKGFAYLMQEL-----PRERLVI------GAL 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DE 382
            V+  R +L   + Y + R + G  L      +  +A +  +        +R+  +F D+
Sbjct: 252 GVAAARGALDLTVAYCQERVLFGQKLAQLQNTRFEMARMETE--------YRINKAFVDQ 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +           A + KY   +M   V    ++  GG GY  E  I+R + ++    I
Sbjct: 304 CINEYVAGTLDAATASMAKYSATEMQCRVTDGCLQLFGGYGYTSEYPISRAFADARVQRI 363

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 364 YGGTSEIM 371


>gi|116748810|ref|YP_845497.1| butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
 gi|116697874|gb|ABK17062.1| Butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 33/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D++ I  Q   + DG  Y L+G K W  +   ++ + +LA  +   G   
Sbjct: 122 FGLTESGAGSDVSGI--QTTAVRDGDHYVLNGAKQWITNGGEAEIYSVLAITDRSKG--- 176

Query: 258 VPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            PR     ++E   P G  + + + K+G R++AT EL F +       L+G     TG +
Sbjct: 177 -PRGASFFVVEKDDP-GFSFGKKEKKLGIRASATRELVFQDCRIPKERLIG--REGTGFI 232

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             MK     D +   +  + V L++     ++ YAR+R   G  +I    ++  +AD+A+
Sbjct: 233 VAMKTF---DKSRPGIGALGVGLSQGALDISVEYARKRMQFGKPIISFQAIQHKLADMAI 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA AL +  A   D     S +      +A + K +    A     EA++ +GG GY
Sbjct: 290 KTEAARALIYAAARYMDTDPPDSSK------VAAMCKVFAGDAALYAATEAVQILGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGS 446
           +++  + +  R++    I  G+
Sbjct: 344 MQDYPVEKMMRDAKILQIYEGT 365


>gi|284167626|ref|YP_003405904.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017281|gb|ADB63231.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 20/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
           + LTE + G+D AA+ +  ++  D +  + GHK W     ++D  I++A+   EG  G  
Sbjct: 125 VSLTEPQAGSDAAALETSARRDGDEL-VIDGHKVWTSHGEVADFLIVVARTGDEGDHGDV 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-IL 315
            +  + +  S +GL +  +++      +A VE E     G  + + N+     +  K I+
Sbjct: 184 SLIGISDPQSVDGLEF--VRDIPCMEGDAVVESEVKYD-GVRVPEENIIGEEGKGFKYIM 240

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   +  +   V +A+     ++ +A  R   G  + +   +   +AD+A+DI AA 
Sbjct: 241 RALDVGRIGAAAQGVGVAQGAMDASVDFADEREQFGQPIREFQGVSFKLADMAMDIQAAR 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++   A + D+    +++A+ A+  A         +A  V  EA++  G  GY ++  +
Sbjct: 301 LMTIWAAKNLDDGNRVNKQASMAKTFA-------TDVAMDVTTEAVQVHGSRGYSKDYPV 353

Query: 431 ARHYRESPANSILLGS 446
            R  RE+    I  G+
Sbjct: 354 ERFMREAKGAQIYEGT 369


>gi|77463725|ref|YP_353229.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77388143|gb|ABA79328.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 379

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++     +G Y LSG K F+S    SDA++ + +  G     +   
Sbjct: 124 LTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSDAYLTMCRTGGAGPKGISTL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L+  G+P GL +  L++K+G R+  T +++F      +  DL V          +  LD 
Sbjct: 183 LVPAGTP-GLSFGGLEDKMGWRAQETRQVQFDEC--LVSTDLLVGEEGQGFAYAMAGLDG 239

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN-- 378
             ++++   +  A+A   A R +++          +R      LD     AL FRLA   
Sbjct: 240 GRLNIAATALGGAQAAFDATRAYMA----------ERKAFGQRLD--GFQALQFRLAEME 287

Query: 379 -SFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAME----CI---GGSGYIEERS 429
               +A+    +AA+     AP    +C     AV   A E    C+   GG GY+ +  
Sbjct: 288 VKLQQARIFLRQAAWKLDQGAPDATKFCAMAKLAVTDSAFEVANQCLQLHGGYGYLADYG 347

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I +  R+   + IL G+   M + V   L
Sbjct: 348 IEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|268317526|ref|YP_003291245.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335060|gb|ACY48857.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 673

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 42/322 (13%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFL 235
           +F  E       P+          L+E   G+D A   ++ +   DG Y  L+G K W  
Sbjct: 151 LFGTEEQKRKYLPIVAREKLAAFCLSEPNVGSDAAGQQTRCELSEDGTYYILNGEKKWST 210

Query: 236 SSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           S  ++    ++A+           E RV   +V   +E        +++ ++K G R   
Sbjct: 211 SGALAGVLTVMAKQRLKNPKTGKEEDRVTALIVTPDMEGVD----VFEKNRSKAGIRGTW 266

Query: 286 TVELEFSNTF----GFLLGD---LNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAI 336
              + F+N        L  +   LNV+      +  L Y    + +  + G   ++ ++ 
Sbjct: 267 QARIRFTNVKVPRENLLYKEGKGLNVA------LSCLNYGRCTLSAGVLGGATWAMEQST 320

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARI 395
            +A+ R+  G  L D   +++ IA +A       A+ + +    D + K    E A A++
Sbjct: 321 KWAQTRYQFGRPLADFEAVQQKIAKMAALTYGMRAMLYMVTGMLDRQDKDIMIETAAAKV 380

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  +C +M   VI EAM+ +GG GY+ E  + R +R+   + I+ G+   M   + 
Sbjct: 381 -------FCSQMGWEVIDEAMQIMGGEGYMTENELERVWRDHRIHRIVEGANEVMQSYIF 433

Query: 456 NLLEKGTNLFEQLFSTLEQDLG 477
                G  L EQ+ + ++Q LG
Sbjct: 434 AY--GGKQLAEQMLA-IKQALG 452


>gi|209148755|gb|ACI32953.1| Long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Salmo salar]
          Length = 411

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 33/277 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P       IG + +TE   G+D+  + +  +K  D  + L+G+K F+++      +++  
Sbjct: 140 PQMAAGTCIGAIAMTEPGAGSDLQGVRTYAKKDGDD-WILNGNKVFITNGCMADMVIVVT 198

Query: 249 VEGR--------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297
           V  R        +  FLV    E G P     ++L+ KIG  +  T EL F +       
Sbjct: 199 VTNREAKTAAHGISLFLV----EKGMPGFQAGKKLE-KIGLMAQDTAELFFEDVRLPASA 253

Query: 298 LLGDLNVS----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           LLG  N         +   ++LI    A M+++       E  +Y  +R   G  +    
Sbjct: 254 LLGQANKGFYYLMNELPQERLLI----ADMAIASSEFMFEETRNYVTQRKAFGKTIAHLQ 309

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A++  +I    +          E +  S+ A+ A       KYW   +  +V  
Sbjct: 310 TVQHKLAELKTEICVGRSFLDNCLQLHAEKRLDSQTASMA-------KYWASDLQNSVAT 362

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++  GG GY+ E  IA+ + +S    I  G+   M
Sbjct: 363 RCLQLHGGWGYMWEYPIAKAFVDSRIQPIYGGTNEIM 399


>gi|330960953|gb|EGH61213.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 387

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/311 (20%), Positives = 135/311 (43%), Gaps = 28/311 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R  +P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPRLVSGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYILNGSKTWITNGPDADTYVIYAKTDLAKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-LDS 320
               G       +K+G R + T EL F +       LLG L+        +++L+  LD 
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDCG------VRVLMSGLDY 246

Query: 321 AIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + 
Sbjct: 247 ERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYA 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R  R
Sbjct: 307 VAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGRLLR 359

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 360 DAKLYEIGAGT 370


>gi|228988255|ref|ZP_04148351.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228771465|gb|EEM19935.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 608

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|226941807|ref|YP_002796881.1| glutaryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716734|gb|ACO75872.1| Probable glutaryl-CoA dehydrogenase [Laribacter hongkongensis
           HLHK9]
          Length = 396

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ S+ +K+ DG Y LSG K W  +SP++D  ++ A+ + G +  F+
Sbjct: 140 FGLTEPDAGSDPGSMHSRARKV-DGGYLLSGSKMWITNSPIADVLLVWARDDAGDIRGFV 198

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           + R +      GL   +++ K   R++ T E+      G ++ D +   G          
Sbjct: 199 LERGMA-----GLSTPKIEGKFSLRASVTGEIVMD---GVMVPDSHCLPGVRGLKGPFSC 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATAL 372
           L+ A   ++   +  AE+  +  R++V   +   +P     +++  +A++  +IA     
Sbjct: 251 LNKARYGIALGALGAAESCWHTARQYVLDRLQFGRPLAANQLVQWKLAEMQTEIALGLQA 310

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + ++    D   +  E       M  + K   C  A  +   A + +GG+G  +E  + R
Sbjct: 311 ALQVGRLMDAGTAAPE-------MVSLIKRNNCGKALGIARMARDMLGGNGISDEFGVIR 363

Query: 433 H 433
           H
Sbjct: 364 H 364


>gi|254512802|ref|ZP_05124868.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221532801|gb|EEE35796.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249
           L +TE   G+D+  +  Q  +  D  + ++G K F+S +  +D FI+             
Sbjct: 122 LAMTEPDAGSDVRGMKCQAMRDGDD-WVVNGSKHFISGAEHADFFIVFIATGVDETPKGP 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           + R+  FLV R    G+P G   +   N + ++      L F N       +LG+++   
Sbjct: 181 KKRITTFLVDR----GTP-GFELREGYNSVSHKGYKNYILYFDNCRLPDAQVLGEVDGGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IAD 361
             + +      L  A  SV   R     A++YA  R   G     QP+ K       IAD
Sbjct: 236 AVMNEWLYATRLTVAAFSVGRARRCFDYALNYAAERKQFG-----QPIGKFQGVGFQIAD 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I AA  L+   A   DE    + E A A++ A        +M   V    ++  GG
Sbjct: 291 MITEIDAADWLTLSAAWRLDENLPSNREIASAKLYA-------SEMLARVTDTTLQIYGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G +++  I R +R++    I  G+
Sbjct: 344 MGLMDDFPIERFWRDARVERIWDGT 368


>gi|126726089|ref|ZP_01741931.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126705293|gb|EBA04384.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 559

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 45/303 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    ++W PK+ S E  PT          A+    TE   G
Sbjct: 252 GSLGTRSEIAAELIICGGTEAQKENWLPKLASGEILPT----------AV---FTEPNTG 298

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ A+ ++  K  D  Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 299 SDLGALRTRAVKDGDE-YAVTGNKTWITHAARTHVMTLLARTDAETTDYKGLSMFLAEKT 357

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---MKI 314
              D +P    G+    ++  +G R     EL F N   F +   N+  G VE     ++
Sbjct: 358 PGTDEAPFPTEGMTGGEIE-VLGYRGMKEYELAFDN---FKVKTDNL-LGGVEGKGFKQL 412

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   V +A+A     + YA  R   G  LI+ P +   +A +A++IA  
Sbjct: 413 METFESARIQTAARAVGVAQATLDVSLQYALDRKQFGKSLINFPRVSGKLAMMAVEIAVT 472

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  AN  D  +    EA  A+++         ++A A     ++  GG+G+  E  
Sbjct: 473 RQLTYFSANEKDAGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYK 525

Query: 430 IAR 432
           I+R
Sbjct: 526 ISR 528


>gi|37912880|gb|AAR05216.1| predicted acyl-CoA dehydrogenases [uncultured marine
           proteobacterium ANT32C12]
          Length = 383

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR----V 253
           + ++E   G+D++AI +  +K  D  Y ++G K W  +S  +D   +LA   EG      
Sbjct: 123 IAVSEPSAGSDVSAIKTTAKKDGDD-YVINGTKMWITNSTQADFICLLANTGEGNPHSNK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +VP  L      G+      NK+G RS+ T ++ F +      +L+G+     G   
Sbjct: 182 SLIIVPMNLP-----GISLSERFNKLGMRSSDTAQIFFDDVRVPQRYLIGE----EGKGF 232

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH----YARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + +  I   +G    L + I     Y  +R   G  ++D  V+   +A++  ++
Sbjct: 233 RYQMEQFQEERIYGAAGALKMLGQVIQDTIEYTSQRQAFGKSILDNQVVHFRLAELQTEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  +L +     +   +  + +A+ A++ A        ++   V    ++  GG GY+ 
Sbjct: 293 EALRSLVYDAVEGYINGQDVTMKASMAKLKA-------GRLGREVTDSCLQYWGGMGYMW 345

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           +  ++R +R+    SI  G+   M+
Sbjct: 346 DTPVSRAFRDGRLTSIGGGADEIML 370


>gi|52140527|ref|YP_086303.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51973996|gb|AAU15546.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 594

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|254473913|ref|ZP_05087307.1| isovaleryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211957023|gb|EEA92229.1| isovaleryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 387

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 59/319 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP     + PK+ S E+  +             L ++E   G+D+ ++  + +K +D  Y
Sbjct: 108 TPEQKAKYLPKLCSGEHVGS-------------LAMSEPGAGSDVVSMKLRAEKRND-RY 153

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIG 280
            L+G+K W  + P +   ++ A+ +   G    PR     L+E G       Q+L +K+G
Sbjct: 154 VLNGNKMWITNGPDASTLVVYAKTDPDAG----PRGMTAFLIEKGMKGFSTAQKL-DKLG 208

Query: 281 NRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----M 328
            R + T EL F        N  G     +NV         ++  LD   + +SG     M
Sbjct: 209 MRGSNTCELVFEDCEVPYENVLGEEGKGVNV---------LMSGLDYERVVLSGGPLGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             ++   + Y   R   G  + +  +M+  IAD+   + A+ +  + +A + D  ++  +
Sbjct: 260 AAAMDIVVPYIHERKQFGKSIGEFQLMQGKIADMYTLMNASRSYVYAVAAACDRGETTRK 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++A   +       +  + A  +  EA++ +GG+GYI E    R  R++    I  G+G 
Sbjct: 320 DSAGCIL-------YSAENATKLALEAIQSLGGNGYINEYPTGRLLRDAKLYEI--GAGT 370

Query: 449 AMVLDVLNLLEKGTNLFEQ 467
           + +  +L     G  LF++
Sbjct: 371 SEIRRML----IGRELFQE 385


>gi|115522103|ref|YP_779014.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516050|gb|ABJ04034.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 381

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 15/259 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+ A+ +   K+    Y ++G K F+++   +D  I++A+  G     L 
Sbjct: 126 IAMTEPGTGSDLQAVRTTA-KLQGNAYVINGQKTFITNGQNADLVIVVARTGGAGAKGLS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315
             ++E     G    R  +KIG  ++ T EL F +       LLG      G  + M+ L
Sbjct: 185 LIVVETKDNPGFKRGRNLDKIGLHASDTSELFFEDAVAPPENLLG-AEEGKGFAQLMQQL 243

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  AI +V+ M  ++     Y R R   G     QP+++    + A  +A     +
Sbjct: 244 PQERLIIAIGAVAAMERAVQLTADYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F      D    +        + A + K+W  +     + E ++  GG GY++E  I+R 
Sbjct: 297 FIARVFVDFCLVQLLAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPISRM 356

Query: 434 YRESPANSILLGSGNAMVL 452
           Y ++    I  G+   M L
Sbjct: 357 YVDARIQKIYGGTNEVMKL 375


>gi|322700751|gb|EFY92504.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 540

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC 255
           L +TE   G+D+A +T + +   DG  + ++G K W  +   +D F    +   EG  G 
Sbjct: 267 LAITEPDAGSDVANLTCEAKLSEDGKHFIVNGEKKWITNGIWADYFTTAVRTGGEGMNGV 326

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  L+E G   G+  +R+  + G  S+ T  + F +       LLG  +   G +   
Sbjct: 327 SLL--LIERGP--GVNTRRMDCQ-GVWSSGTTYITFEDVKVPVENLLGKKDKGFGVIMTN 381

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +   I  +   RV   E++ YA +R   G  LI+ PV++  +A +A  I A+   
Sbjct: 382 FNHERIGIIIQCLRFSRVCFEESVKYANKRRTFGKKLIEHPVIRMKLAHMARQIEASYNW 441

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMECIGGSG 423
              L N   + +   E  A  R+  PI         T  +C + A  +        GG G
Sbjct: 442 ---LENMIYQCQKMGEHEAMLRLGGPIAGLKAQSTVTFEFCAREASQIFGGLSYSRGGQG 498

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
                 + R YR+  A +I  GS   M+
Sbjct: 499 ----GKVERLYRDVRAYAIPGGSEEIML 522


>gi|17533517|ref|NP_493832.1| Acyl CoA DeHydrogenase family member (acdh-9) [Caenorhabditis
           elegans]
 gi|15150665|gb|AAK85472.1|AC006632_7 Hypothetical protein F28A10.6 [Caenorhabditis elegans]
          Length = 409

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 36/268 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQ---VEGRVGCF 256
           LTE   G+D A+I +   K  D  Y ++G K F+S   +  + F+M+ Q     G  G F
Sbjct: 146 LTEPDAGSDAASIRTTATKKGD-YYVVNGSKAFISGAGTSNNYFVMMRQDGAAPGAKGIF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNV 304
            +  ++EDG+  G  Y + ++K+G  S  T  L F +             FGF     N+
Sbjct: 205 CL--MIEDGT-EGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGF-----NI 256

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   +   +I I    A  S+   + S+  AI + + R   G  L D    +  +A++A 
Sbjct: 257 AMAGLNGGRINI----ASCSLGAAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELAT 312

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  +    A   D      E+ A    +  + K         V+  A++  GG G+
Sbjct: 313 KLYTSRLIVRNAAEQLDN--DDPEKVA----LCAMAKLHATDNCFDVVNGALQMFGGYGF 366

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
           +++  + ++ R+   + IL G+   M L
Sbjct: 367 LKDYPVQQYLRDIRVHQILEGTNEMMRL 394


>gi|49477989|ref|YP_037181.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49329545|gb|AAT60191.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 382

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 189 ---NTIGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|314921975|gb|EFS85806.1| acyl-CoA dehydrogenase protein [Propionibacterium acnes HL001PA1]
          Length = 199

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 17/185 (9%)

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ Y   ++K+G R + T E+ F NT        G     L+V+ G +++ ++ I    A
Sbjct: 8   GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTLDNSRVSI----A 63

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  A  + ++R   G  L +   ++  +AD+A+ + AA AL++  A   D
Sbjct: 64  AQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---D 120

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            +  ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    
Sbjct: 121 RSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQ 177

Query: 442 ILLGS 446
           I  G+
Sbjct: 178 IYEGT 182


>gi|312886027|ref|ZP_07745654.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301484|gb|EFQ78526.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 452

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 40/267 (14%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P  +   AIG  GLTE   G+  A   +   K     + L+G K W  ++  +D  ++ A
Sbjct: 183 PRMQQFKAIGAFGLTEPEVGSAAAGGLTTTAKRDGDTWILNGQKKWIGNATFADILVIWA 242

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-------------NATVELEFS 292
           +   + +V  FL    L   +P G   +++ +K+  R              + T  L+ +
Sbjct: 243 RDVDDNQVKGFL----LRKDTP-GFSVEKMHDKMALRIVQNGIITLKDCVIHETDRLQNA 297

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           N+F      L ++   V           A  +V   R +   A+ Y R+R   G  +   
Sbjct: 298 NSFKDTAKVLQMTRAGV-----------AWQAVGCARGAYESALDYTRKRKQFGKPIASF 346

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  + ++  ++ A   L FRL+   DE K   E A+ A++       +C      V+
Sbjct: 347 QLIQNHLVEMLSNLTAMQTLCFRLSQLQDEGKLNDEHASLAKV-------FCSLRTRDVV 399

Query: 413 AEAMECIGGSGYIEERSIARHYRESPA 439
           ++A E +GG+G + E  +AR   ++ A
Sbjct: 400 SKAREVMGGNGILLEYDVARFVADAEA 426


>gi|312196725|ref|YP_004016786.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228061|gb|ADP80916.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 396

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 118/306 (38%), Gaps = 57/306 (18%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           + TP + + W P+  S E                 LG+TE   G+ +  + ++ +   DG
Sbjct: 107 LGTPAMRERWLPRAASGE-------------AVFCLGITEAEAGSAVQRMRAKVEPDGDG 153

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y L+ +K + +    +DA +  A+   G +G  +V     D +  G+        +G  
Sbjct: 154 -YRLNAYKNYSTQGHRADACLCWARFPNGEIGAVVV-----DMTSEGVGVAGTHRNMGLH 207

Query: 283 SNATVELEFSN---------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            +   EL F N               +F  LLG LN              L +A M +  
Sbjct: 208 GSTEAELTFDNVRIEPDEVLLDGSPGSFRTLLGHLNHER-----------LGNAAMCLGA 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L  A  Y R R      L D   ++  +A++A ++ AA  L +R A+     +S  
Sbjct: 257 AQGALEHATRYLRERPAGSRRLADLQGLQWKVAEMATELEAARLLVYRAAHLAGPHESPP 316

Query: 388 E-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E A A+  A +     C        EAM+  GG GY  E  + R YR+     +  G 
Sbjct: 317 ALETAMAKGKANMVARMVCD-------EAMQLHGGYGYSREFPVERAYRD--VRGLSFGG 367

Query: 447 GNAMVL 452
           G   VL
Sbjct: 368 GTVEVL 373


>gi|187919393|ref|YP_001888424.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717831|gb|ACD19054.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 393

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKKGDH-YVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G    M  L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN--GGAKVLMSGL 245

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 246 DY-ERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D      E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGK--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|327265911|ref|XP_003217751.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Anolis carolinensis]
          Length = 615

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 45/307 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +  T    + + PK+ S EY                  LTE   G+D A+I S+    
Sbjct: 147 ILIAGTKEQKEKYLPKLASGEYTAA-------------FCLTEPGSGSDAASIQSRATLS 193

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE---------GRVGCFLVPRLLEDGSPNGL 270
            DG  + L+G K W  +  ++D F + A+ E          ++  F+V R        G+
Sbjct: 194 EDGKHFKLNGSKIWISNGGIADIFTVFARTEVTDKDGTVKDKITAFIVERAF-----GGV 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS- 326
            + + ++K+G R + T EL F NT      ++G+  V  G    M IL     ++ S S 
Sbjct: 249 THGKPEDKLGIRGSNTCELHFENTKIPIDNVIGE--VGGGFKVAMNILNSGRFSMGSASA 306

Query: 327 GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-- 383
           GM   L E    YA  R      L +  +++   A +A       ++++  A   D    
Sbjct: 307 GMIKKLIEMTAEYACTRKQFNKKLSEFGLIQEKFALMARKAYVMESMAYLTAGMMDSPGI 366

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S EAA  ++ +     W C      ++EA++ +GG GY+++    R+ R+S    I 
Sbjct: 367 PDCSIEAAMVKVFSS-EGAWIC------VSEALQILGGLGYMKDYPYERYLRDSRILLIF 419

Query: 444 LGSGNAM 450
            G+   +
Sbjct: 420 EGTNEVL 426


>gi|284042455|ref|YP_003392795.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946676|gb|ADB49420.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 395

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 31/255 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D  ++ ++ ++  D  + L+G K W  +  ++D  ++ A
Sbjct: 129 PRMARGEAIGCFGLTEPDSGSDPGSMRTRARRDGDE-WVLNGQKMWITNGTIADVAVVWA 187

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           Q +  V  FLVPR    G+P G     +  K+  R++ T EL   +        L +   
Sbjct: 188 QTDDGVRGFLVPR----GTP-GFSAPEIHKKLSLRASVTSELVLDDVRLPDSARLPEATS 242

Query: 305 STGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
             GP+  +    Y    +   +G  R     A+ Y++ R     I  D+P+     +++ 
Sbjct: 243 LRGPLSCLNEARY--GIVWGAAGAARACFEAALDYSKTR-----IQFDKPIASFQLVQQR 295

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A+ +  +T L+  L    D    R E  +  ++            A  V   A + 
Sbjct: 296 LAEMAVKVNQSTLLALHLGRLKDAGTLRPEHVSMGKLA-------NVNAALDVARTARQV 348

Query: 419 IGGSGYIEERSIARH 433
           +G +G   E  + RH
Sbjct: 349 LGANGITLEYPVIRH 363


>gi|255533603|ref|YP_003093975.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255346587|gb|ACU05913.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 596

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 56/280 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 150 LTEPNSGSDANSGKTKAKLSEDGKHYLINGQKMWITNGGFADVFIVFAKIDDDENLTAFI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R        G+     ++K+G + ++T ++ F+              N F   +  LN
Sbjct: 210 VEREF-----GGITMNPEEHKMGIKGSSTRQVFFNDCPVPVENMLSERQNGFKIAVNILN 264

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA----- 358
           +           I L +A +  S  +  +  A++Y+  R     I  D+ + K       
Sbjct: 265 IGR---------IKLAAAAIGAS--KSVIDTAVNYSNER-----IQFDRQISKYGAIRYK 308

Query: 359 IADIALDIAAATALSFRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCK 406
           +A++A  + A  + ++R   + D+A            K++ +      +   I K W  +
Sbjct: 309 LAEMATKVYAVESANYRAGQNIDDAYDALVAGGMDAGKAKLKSTEQFAVECAILKVWGSE 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               V+ E ++  GG G+  E  + R YR++  N I  G+
Sbjct: 369 ALDYVVDEGVQIYGGMGFSAEAPMDRAYRDARINRIFEGT 408


>gi|160898756|ref|YP_001564338.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364340|gb|ABX35953.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 645

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 66/338 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKI-----SDGI---YCLSGHKWFLSSPMSD-----AFIMLAQ 248
           L+E + G+ ++ I ++ +       SD +   Y L G+K ++S+   +       ++LA+
Sbjct: 190 LSEPQAGSSLSDIATRAEPDGADFESDALGPRYRLKGNKMWISAGDHELTENIVHLVLAK 249

Query: 249 VEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF- 291
           + G  G           F+VP+ L D      G  N +    L +K+G R      L F 
Sbjct: 250 IPGPDGKPVPGVKGISLFIVPKKLVDTEGQLTGERNDVALAGLNHKLGWRGTTNTLLNFG 309

Query: 292 ---------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                    +   G+L+G     L      + + +I I + + ++ ++G   SL  A + 
Sbjct: 310 EGRFPVRGGAGAVGYLVGKPGEGLKCMFHMMNEARISIGMAATMLGLAGYHASLDYAQNR 369

Query: 339 ARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            + R + G               +I+   +KR +         A AL+   A   DE  +
Sbjct: 370 PQGRPIKGAPGAAGKDATRPQSRIIEHADVKRMLLAQKSYCEGALALNLFCARLVDEQHT 429

Query: 386 RSEEA-AYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + E+ A AR    ++ PI+K W  +      + A++  GG GY  +  + +++R++  N
Sbjct: 430 GTPESVAEARLLLEVLTPISKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLN 489

Query: 441 SILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQD 475
            I  G+     +D+L    L+E G  L  QL +T   D
Sbjct: 490 MIHEGTHGIQAMDLLGRKVLMEGGKGL--QLLATRVND 525


>gi|229014193|ref|ZP_04171314.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides DSM 2048]
 gi|228747147|gb|EEL97029.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides DSM 2048]
          Length = 608

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|187478253|ref|YP_786277.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115422839|emb|CAJ49367.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 384

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCF 256
           LTE   G+D  ++ ++ ++  D  + +SG K F+S    +D  I++A+  G     V  F
Sbjct: 124 LTEPNAGSDAGSLVTRAERDGDD-FLISGAKAFISGGGDTDLLIVMARTGGPGPAGVSAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            VP        +G+ Y R + K+G  S +T  + F N       +LG    S G  E  K
Sbjct: 183 AVP-----AHASGISYGRKEEKMGWNSQSTRPISFENVRVPADSMLG----SEG--EGFK 231

Query: 314 ILIY-LDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   +++    V  A+ A+  ARR    R      L +   ++  +AD+A  + 
Sbjct: 232 IAMKGLDGGRINIGTCSVGAAQGALDAARRYMHERRQFNRRLAEFQALQFKLADMATHLV 291

Query: 368 AATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  +    A   D     +    A A+  A  T +  C        +A +  GG GY+ 
Sbjct: 292 AARQMVRLAACKLDGGSPDAGTYCAMAKRFATDTGFQIC-------LDAQQIHGGYGYLR 344

Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
           +  + R  R++  + IL G+   M V+    LL+KG ++
Sbjct: 345 DYPLERLVRDTRVHQILEGTNEIMRVIVARQLLDKGADI 383


>gi|89054400|ref|YP_509851.1| butyryl-CoA dehydrogenase [Jannaschia sp. CCS1]
 gi|88863949|gb|ABD54826.1| Butyryl-CoA dehydrogenase [Jannaschia sp. CCS1]
          Length = 381

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 38/270 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SDA+I++ +   +G  G   V
Sbjct: 124 LTEPGSGSDAAALKTRAERTNEG-YALTGTKAFISGGGYSDAYIVMCRTGEDGPRGISAV 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILI 316
             ++EDG+ +GL +  L++K+G RS  T  ++        L D  V    +  E+     
Sbjct: 183 --VVEDGA-DGLSFGGLEDKMGWRSQPTRAVQ--------LDDCAVPAANLLGEEGHGFR 231

Query: 317 YLDSAIMSVSGMRVSL------------AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           Y   A+  + G R+++               + Y   R   G  +     ++  +AD+ +
Sbjct: 232 Y---AMAGLDGGRLNIAACSLGAAAAALRGTLAYMGERQAFGQSIDQFQALQFRLADMEI 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA     + A   D   S + +A        + K +C +    +  + ++  GG GY
Sbjct: 289 ELEAAKIFLRQAAWKLDTGASDATKA------CAMAKKFCTEAGSRIADQCLQLHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           + +  I +  R+   + IL G+   M + V
Sbjct: 343 LADYGIEKIVRDLRVHQILEGTNEIMRMIV 372


>gi|15890565|ref|NP_356237.1| glutaryl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15158814|gb|AAK89022.1| glutaryl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 395

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 39/289 (13%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITS 216
           SM+++ ++  +H      IF+   D   K   P   +   IG  GLTE   G+D   + +
Sbjct: 99  SMMSVQSSLVIHP-----IFAYGSDEQKKKYLPGLVSGELIGCFGLTEPDAGSDPGGMKT 153

Query: 217 QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCY 272
           + +KI  G Y L G K W  ++P++D F++ A+ E     +  F++ + ++     GL  
Sbjct: 154 RAEKIEGG-YRLRGSKMWISNAPIADVFVVWAKSEAHDNEIRGFVLEKGMK-----GLSA 207

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  K+  R++ T E+           LL +++   GP         L+ A   +S   
Sbjct: 208 PKIGGKLSLRASITGEIVMDGVEVGEDALLPNVSGLKGP------FGCLNRARYGISWGV 261

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  AE     +  Y   R   G  L    + ++ +AD+  +IA     S R+    DE K
Sbjct: 262 MGAAEDCWFRSRQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLMDEHK 321

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              E       M  I K   C  A  +  +A +  GG+G   E  + RH
Sbjct: 322 MAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRH 363


>gi|296391866|ref|ZP_06881341.1| butyryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 33/233 (14%)

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD--- 301
           +  F+VP+ L +     G  N +    L +K+G R   +  L F +     G+L+G    
Sbjct: 12  ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFGDNGACVGYLVGKPHH 71

Query: 302 -LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQP---- 353
            L      + + +I + + + ++  +G   SL     YAR R    +  G     P    
Sbjct: 72  GLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQGRLPDGKDPSAPQVAI 127

Query: 354 ----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
                     + ++A  + A D+    A  F  + + ++ + R +      ++ PI K W
Sbjct: 128 IRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQAHELLDLLTPIVKSW 187

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L 
Sbjct: 188 PSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 240


>gi|229032643|ref|ZP_04188606.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1271]
 gi|228728642|gb|EEL79655.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1271]
          Length = 616

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 131 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 183

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 184 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 238

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 239 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 296

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 297 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 356

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 357 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 415

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 416 MYRDSRINRIFEGT 429


>gi|196032174|ref|ZP_03099588.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus W]
 gi|195994925|gb|EDX58879.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus W]
          Length = 382

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|196044031|ref|ZP_03111268.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|218906203|ref|YP_002454037.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|225866989|ref|YP_002752367.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|301056495|ref|YP_003794706.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|196025367|gb|EDX64037.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|218536613|gb|ACK89011.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|225790985|gb|ACO31202.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|300378664|gb|ADK07568.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 594

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|26325820|dbj|BAC26664.1| unnamed protein product [Mus musculus]
          Length = 411

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 41/277 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G     C
Sbjct: 156 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISC 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLN 303
            +V    E G+P GL + + + K+G  S  T  + F +              GFL+    
Sbjct: 214 IVV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKG 268

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G +         + A  S+     S+     + + R   G  L     ++  +AD+A
Sbjct: 269 LNGGRI---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMA 319

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+  L  R A     A +  EE   A  +  + K +  +   A+  +A++  GG G
Sbjct: 320 TKLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYG 373

Query: 424 YIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           Y+++ ++ ++ R+S  + IL GS   M +L   NLL+
Sbjct: 374 YLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 410


>gi|54302793|ref|YP_132786.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
 gi|46916217|emb|CAG22986.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + +   D  Y L+G K W  + P +   ++ A+         +
Sbjct: 130 LAMSEPNAGSDVISMQLKAELEGDH-YVLNGTKMWITNGPDAHTIVVYAKTNPSAKSHGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F++ R  E     G  + +  NK+G R + T EL F N       +LG +N     VE
Sbjct: 189 TAFIIERDFE-----GFSHAQKLNKLGMRGSNTCELVFENCRVPQENILGKVNYG---VE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  L   + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 ILMSGLDYERVVLAAGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKVADMYTRMN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A + D  ++  ++AA   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AARAYVYTVAAACDRGETTRKDAAGVIL-------YSAELATQLALDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
               R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 FPAGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|332222217|ref|XP_003260263.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Nomascus leucogenys]
          Length = 454

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 114/257 (44%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +      V   
Sbjct: 193 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPVNKA 251

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     ++ G  
Sbjct: 252 FTGFIVEADTP-GVQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKIAMGAF 310

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 311 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 366

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 367 RMSYQRAAWEIDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 419

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 420 VEKLMRDAKIYQIYEGT 436


>gi|229046785|ref|ZP_04192428.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH676]
 gi|228724603|gb|EEL75917.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH676]
          Length = 382

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 39/244 (15%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P  D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVVNGRKTFTTMAPALDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +++ +  + ++       V  AE+       H S  +L   P +++ + ++ L++  A  
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRKLVGELELELMQARV 296

Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             +++A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  +
Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPL 351

Query: 431 ARHY 434
            R+Y
Sbjct: 352 HRYY 355


>gi|148237504|ref|NP_001090479.1| acyl-CoA dehydrogenase (3J649) [Xenopus laevis]
 gi|114108055|gb|AAI23151.1| MGC154345 protein [Xenopus laevis]
          Length = 423

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 30/276 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     V + LG++E   G+D+A+I +   K  D  Y ++G K W  S   +D   +LA
Sbjct: 151 APTIAGDVVVCLGVSEAGAGSDVASIKTTAVKKGDD-YIINGSKMWTTSGCQADWMCLLA 209

Query: 248 QVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
                        F +P         G+   +   KIG +S+ T ++ F +      +L+
Sbjct: 210 NTSAGPPHRNKSLFCLPM-----KTPGVQVTKKIEKIGMKSSDTAQIFFEDVRVPSKYLI 264

Query: 300 GDLNVSTGPVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           G+     G     ++L + +     A   ++ M   + E I Y  +R V    ++   V+
Sbjct: 265 GE----EGMGFTYQMLQFQEERMWGAANVLTTMENIIQETIDYTSQRKVFNQPVLHNQVV 320

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A++A ++    +L +R    + E    ++ A+ A++ A        ++A  +    
Sbjct: 321 HFRLAELATEVELLRSLLYRAVAMYVEGNDVTKLASMAKLKA-------GRLARELSDSC 373

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++  GG G+  E  ++R YR+S   SI  G+   M+
Sbjct: 374 LQFWGGMGFTNEVLVSRFYRDSRLLSIGAGADEVML 409


>gi|37912850|gb|AAR05190.1| predicted acyl-CoA dehydrogenases [uncultured marine
           proteobacterium ANT8C10]
          Length = 383

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR----V 253
           + ++E   G+D++AI +  +K  D  Y ++G K W  +S  +D   +LA   EG      
Sbjct: 123 IAVSEPSAGSDVSAIKTTAKKDGDD-YIINGTKMWITNSTQADFICLLANTGEGNPHSNK 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +VP  L      G+      NK+G RS+ T ++ F +      +L+G+     G   
Sbjct: 182 SLIIVPMNLP-----GISLSERFNKLGMRSSDTAQIFFDDVRVPQRYLIGE----EGKGF 232

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH----YARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + +  I   +G    L + I     Y  +R   G  ++D  V+   +A++  ++
Sbjct: 233 RYQMEQFQEERIYGAAGALKMLGQVIQDTIEYTSQRQAFGKSILDNQVVHFRLAELQTEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  +L +     +   +  + +A+ A++ A        ++   V    ++  GG GY+ 
Sbjct: 293 EALRSLVYDAVEGYINGQDVTMKASMAKLKA-------GRLGREVTDSCLQYWGGMGYMW 345

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           +  ++R +R+    SI  G+   M+
Sbjct: 346 DTPVSRAFRDGRLTSIGGGADEIML 370


>gi|56964752|ref|YP_176483.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56910995|dbj|BAD65522.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 594

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 33/304 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D ++A T+     +   Y L+G K W  +S  +D FI+ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALSAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFIVYAKVDGEKFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
            R   DG   G   +++  K G+ +   +  + +     +LG+  +  G V    IL   
Sbjct: 210 ERTF-DGVSTGPEEKKMGIK-GSSTRTLILEDVAVPVDNVLGE--IGRGHVIAFNILNIG 265

Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA----- 371
                +  + G + +L  A  YA  R      +    +++  +A +A +I A+ +     
Sbjct: 266 RYKLGVGCIGGAKRALELAATYATERKQFKTTIASFALIQEKLASMATEIYASESAIYRT 325

Query: 372 ---LSFRLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              +  R A+  +E K+     A A     I   + K+   +    V  EA++  GG G+
Sbjct: 326 GGLIESRFASLTEEEKNDGRAVASAIAEYAIECSLNKFAGSETLDFVADEAVQIHGGYGF 385

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTL 472
           + E  + R YR+S  N I  G+     L V            L  L+K   L E+L   +
Sbjct: 386 MAEYEVERIYRDSRINRIFEGTNEINRLLVPGTLMRKALKGDLPFLQKAQALQEELMMLM 445

Query: 473 EQDL 476
            Q++
Sbjct: 446 PQEI 449


>gi|296425915|ref|XP_002842483.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638752|emb|CAZ86674.1| unnamed protein product [Tuber melanosporum]
          Length = 511

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 50/275 (18%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVG 254
           +I L ++E   G+D+A+I +   K +DG  Y ++G  KW  +   +D F    + E    
Sbjct: 241 SICLAVSEAFAGSDVASIRTTAVKSADGTHYVVNGTKKWITNGNWADYFTTAVKTEKGYS 300

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
             L+ R        G+  +++K    + +  T  + F N        +NV   PVE++  
Sbjct: 301 MLLIER------GEGVETEQIKTSYSSAA-GTAFITFDN--------VNV---PVENLLG 342

Query: 313 -------KILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                   I+   +      A  S+   RV + E + +A +R V G  L+DQPV++  +A
Sbjct: 343 KEHQGFPVIMSNFNHERWVMACASIRASRVVVEECLKWANQRKVFGRRLVDQPVIRGKLA 402

Query: 361 DIALDIAAAT----ALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAE 414
            +   + +      A+++++ N   + +++S       +  PI   K +  + A  +  E
Sbjct: 403 KMISLVESGQSWLEAITYQMCNMTYQQQAKS-------LAGPIALLKNFITRAAHEIADE 455

Query: 415 AMECIGGSGYIEE---RSIARHYRESPANSILLGS 446
           +++  GG G  +    R I   +R    +++L GS
Sbjct: 456 SVQVFGGRGITKSGMGRVIENFHRTYKFDAVLGGS 490


>gi|222546881|gb|ACM66946.1| FadST1 [Streptomyces toxytricini]
          Length = 386

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 50/315 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +    + W PK+ S E             V    GLTE   G+D     +   K   
Sbjct: 102 LFGSEEQKRQWLPKLCSGE-------------VLGAFGLTEPGAGSDAGGTRTTAVK-DG 147

Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274
           G + ++G K F+++  +D    + +  V GR       +   +VP     G+P G     
Sbjct: 148 GEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPEISSIIVP----SGTP-GFTVAA 202

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +K+G  ++ T EL F         L+G+           + L  LD   +++S +   
Sbjct: 203 PYSKVGWNASDTRELSFDGVRVPLENLVGEEGRGY-----AQFLRILDEGRIAISALATG 257

Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA     E++ YA+ R   G  + D   ++  +AD+ +    A          + +A SR
Sbjct: 258 LAQGCVDESVKYAKERQAFGRPIGDNQAIQFKLADMEMRAHMARV-------GWRDAASR 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  +  A I K +   +A     +A +  GG G++ E  +AR +R+S    + +G 
Sbjct: 311 LVNGEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGE 368

Query: 447 GNAMVLDVLNLLEKG 461
           G + V  +L   E G
Sbjct: 369 GTSEVQRMLIARELG 383


>gi|218900156|ref|YP_002448567.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|218541848|gb|ACK94242.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|118464978|ref|YP_881894.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166265|gb|ABK67162.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 387

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 30/277 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PKI S E               + + +TE   G+D+ ++ +  ++  D  Y ++G 
Sbjct: 115 RRWLPKIISGE-------------AVLAIAMTEPGTGSDLQSVKTTARRDGD-FYVINGS 160

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVE 288
           K F+S+    D  +++A+ +   G   V  ++ +   N  G    R+  K+G  +  T E
Sbjct: 161 KTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETDENLAGFERGRVLAKMGQHAQDTRE 220

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L FS+       LLG      G  + M+ L    L  A +  +   V++ EAI Y+R R 
Sbjct: 221 LFFSDMRVPVANLLG-AQEGLGFYQLMEQLARERLIIATICAALAEVAVLEAIKYSRERE 279

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G     +P+ K       L      AL+ +     D A  +  +       A + K +
Sbjct: 280 AFG-----RPIGKFQHTKFVLAECKTEALAIK--TMVDYAVGQYLDGKNDPATASMAKLF 332

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             + +  ++ + ++  GG GY+ E  IA  Y  S  N
Sbjct: 333 AAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVN 369


>gi|118384792|ref|XP_001025535.1| Acyl-CoA dehydrogenase, middle domain containing protein
           [Tetrahymena thermophila]
 gi|89307302|gb|EAS05290.1| Acyl-CoA dehydrogenase, middle domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 455

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 27/285 (9%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           T    K + PK+ S E+              IG L ++E   G+D+ ++  + +K  +  
Sbjct: 177 TEEQKKKYLPKLCSGEH--------------IGALAMSEPGAGSDVVSMKLKAEKRGNK- 221

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ E  +    +   + +    G    +  +K+G R +
Sbjct: 222 YVLNGNKMWITNGPDADVLVVYAKTEPELKQKGITAFIIEKGYKGFSTAQKLDKLGMRGS 281

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       +LG  N     + D      L  A   V  M+ ++     Y + 
Sbjct: 282 NTCELIFDNVEVPEENILGGYNKGVYVLMDGLDYERLVLAAGPVGLMQAAVDYVTPYLKE 341

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +M+  +AD+ + + ++ A+ +  + + D  K  + + A A I+     
Sbjct: 342 RKQFGQPIGAFQLMQGKLADMYVKLQSSRAMLYGCSRACDNGKYSNTDCA-ALIL----- 395

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +    A  V  EA++ +GG+GY  +  + R  R++    I  G+
Sbjct: 396 -YTSTCATEVGLEAIQSLGGNGYTHDYPVNRIMRDAKLYEIGAGT 439


>gi|42784188|ref|NP_981435.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|47567043|ref|ZP_00237760.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|42740119|gb|AAS44043.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|47556361|gb|EAL14695.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|324328938|gb|ADY24198.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|320324609|gb|EFW80686.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320328982|gb|EFW84981.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330880722|gb|EGH14871.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 387

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|169826557|ref|YP_001696715.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168991045|gb|ACA38585.1| Acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 378

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VGC 255
           LTE   G+D  ++ S+  +  D  Y ++G K F+++   +D +I+ A          +  
Sbjct: 124 LTEPGAGSDAGSLQSKAVRDGDE-YVINGSKVFITNGGEADVYIVFASTNPTEKTRGISA 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F+V    E G+P GL   + ++K+G   + TV+L F N       LLG+        E  
Sbjct: 183 FIV----EKGTP-GLIIGKDEHKMGLHGSRTVQLTFDNCRIPADNLLGEEG------EGF 231

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +AEA   A     + R   G  ++ Q  +   +AD+A  +
Sbjct: 232 KIAMANLDVGRIGIAAQALGIAEAALEAASAYAKERVQFGKPIVAQQGVSFKLADMATAV 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++  L +R A+   +      EA+ A++ A        + A     EA++  GG GY E
Sbjct: 292 ESSKLLVYRAADLRAKGLPCGAEASMAKLFA-------SRTAVQTAIEAVQVFGGYGYTE 344

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R++R++    I  G+
Sbjct: 345 DYPVERYFRDAKVTEIYEGT 364


>gi|170097926|ref|XP_001880182.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
 gi|164644620|gb|EDR08869.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
          Length = 424

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 29/266 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P+      IG  GLTE   G+D A + +  +++ DG + L+G K W  +
Sbjct: 144 FGTEAQKEKYLPLLAKGELIGAFGLTEPNHGSDPAGMETTAEEV-DGGFILNGSKTWITN 202

Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +P++D FI+ A    + R+  F++ + L+     GL    +KNK+  R++ T  +   + 
Sbjct: 203 APVADVFIVWANCKWDNRIRGFILDKGLK-----GLTAPAIKNKVALRASLTGSIFMDSV 257

Query: 295 FGFLLGD--LNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIH----YARRRHVSGG 347
              + GD  L  S G          L+SA   +S G+  +L + I     YA  RH    
Sbjct: 258 --RVSGDALLPKSKGLGSAFSC---LNSARYGISWGVMGALEDCIERTRAYALERHQFNR 312

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ + D  +++A     S ++    DE K   E       M  + K   C  
Sbjct: 313 PLASFQLVQKKLVDAQIEVALGLLASLQVGRLKDEGKLAPE-------MVSMIKKNNCGK 365

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A       ++ +GG+   +E  + RH
Sbjct: 366 ALQHSRVVLDILGGNAAADEYHVGRH 391


>gi|111222577|ref|YP_713371.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150109|emb|CAJ61804.1| Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 383

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 40/285 (14%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIML 246
           P+  +  A+G  GLTE   G+D A  T    ++    + ++G K F+++  +D    + +
Sbjct: 113 PLLTSGRALGAFGLTEPGAGSD-AGGTRTTARLDGDEWVVNGSKAFITNSGTDITRLVTV 171

Query: 247 AQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             V G+   G   +  +L      G   Q   +K+G  ++ T  L F         D+ V
Sbjct: 172 TAVTGQTAAGRKEISTILVPVPTPGFTAQPAYSKVGWHASDTHPLTFD--------DVRV 223

Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
              P E++           L  LD   +++S + V LA     E+  YA+ R   G    
Sbjct: 224 ---PAENLLGARGRGYANFLSILDEGRIAISALAVGLAQACVDESARYAKEREAFGA--- 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             P+ +     IA  IA     ++    ++ +A SR       +  A + K +  + A  
Sbjct: 278 --PIGRNQA--IAFKIAEMETRTYVARAAYYDAASRMLAGQPFKKQAAMAKLFSSEAAVT 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              EA +  GG G++ E  +ARH+R+S    + +G G + V  +L
Sbjct: 334 NAREATQIFGGYGFMNEYPVARHWRDS--KILEIGEGTSEVQKML 376


>gi|118403322|ref|NP_080138.2| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Mus
           musculus]
 gi|26346212|dbj|BAC36757.1| unnamed protein product [Mus musculus]
 gi|26364551|dbj|BAB26255.2| unnamed protein product [Mus musculus]
 gi|148693364|gb|EDL25311.1| acyl-Coenzyme A dehydrogenase family, member 8 [Mus musculus]
          Length = 413

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 41/277 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G     C
Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISC 215

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLN 303
            +V    E G+P GL + + + K+G  S  T  + F +              GFL+    
Sbjct: 216 IVV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKG 270

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G +         + A  S+     S+     + + R   G  L     ++  +AD+A
Sbjct: 271 LNGGRI---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMA 321

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+  L  R A     A +  EE   A  +  + K +  +   A+  +A++  GG G
Sbjct: 322 TKLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYG 375

Query: 424 YIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459
           Y+++ ++ ++ R+S  + IL GS   M +L   NLL+
Sbjct: 376 YLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 412


>gi|163942725|ref|YP_001647609.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229135837|ref|ZP_04264606.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST196]
 gi|163864922|gb|ABY45981.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228647626|gb|EEL03692.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST196]
          Length = 608

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|226364571|ref|YP_002782353.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243060|dbj|BAH53408.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 131 LSEREAGSDAASMRTRAKADGDD-WILNGSKCWITNGGKSSWYTVMAVTDADKGANGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 190 FMVHKDDEGFVVGPKEKKLGIKGSPTAELYFENC--KIPGDRIIGEPGTGFKTALQTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 248 TRPTIGAQAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 308 SA-----ARAERGEKNLGFISAA-AKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKITQIYEGT 372


>gi|119482203|ref|XP_001261130.1| acyl-CoA dehydrogenase [Neosartorya fischeri NRRL 181]
 gi|119409284|gb|EAW19233.1| acyl-CoA dehydrogenase [Neosartorya fischeri NRRL 181]
          Length = 437

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 19/303 (6%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK+              +  +   LG+TE   G+D+A I +  +  
Sbjct: 133 IARFGTTEQRRRWLPKV-------------ARGDIRFCLGITEPDAGSDVANIQTTARLD 179

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D  Y ++G K ++++ +   +   A   G  G   +  L+   +  G+  +R+ N   N
Sbjct: 180 GDH-YIVNGAKKWITNGIWADYCTAAVRTGGPGRGGISLLVIPLTAPGVTRRRMHNSGVN 238

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            S +T  +EF +       L+G  N     +        L  A  ++   RV   +A HY
Sbjct: 239 ASGSTF-IEFDDVRVPVDNLIGKENKGFPIIMSNFNPERLTLACAALRLARVCAEDAFHY 297

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  LI +  ++  +    L I  A A   +L N  +  K R  +      M  
Sbjct: 298 AVQRETFGAPLIQRQAIQSKVFKFGLMIEPAYAFMEQLVNIIELTKDRPADDVKIGGMTA 357

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI-LLGSGNAMVLDVLNL 457
           + K    +     + EA + +GG+GY +    AR  + S    + ++G G+  ++  L L
Sbjct: 358 LLKVMSTRALEKSVREAQQILGGAGYNKSGKGARIEQISRDVRVHVVGGGSEEIMMGLAL 417

Query: 458 LEK 460
            E+
Sbjct: 418 QEE 420


>gi|91093613|ref|XP_971884.1| PREDICTED: similar to acyl-CoA dehydrogenase [Tribolium castaneum]
          Length = 395

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 36/275 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P   T++     LTE   G+D  A+ +  +K  DG  + ++G K W  +S ++  F+++A
Sbjct: 125 PQLATNMCSSFALTEPSSGSDAFALKTTAKK--DGSDFLINGSKMWISNSDLAGLFLVMA 182

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +   G     CFL+ R     +P GL     + K+G  ++ T  L F N       +L
Sbjct: 183 NADPSSGYKGITCFLIER----DTP-GLTVAIPEKKLGLCASGTCMLTFDNVRVPESAIL 237

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
           G+        +  KI   +L+   + +    V LA+      I Y   R   G  + +  
Sbjct: 238 GEYG------KGYKIAAGFLNEGRVGIGAQMVGLAQGCFDATIPYTLERTQFGKSIFNFQ 291

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            M+  IA IA  I +A  L +  A   +      +EAA A       K++   +A     
Sbjct: 292 GMQHQIAQIATQIESARLLVYNAARLVENGHPFIKEAAMA-------KWYSADVAQQTCV 344

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + ++ +GG G+ ++    + YR+    SI  G+ N
Sbjct: 345 KCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYN 379


>gi|118464496|ref|YP_881797.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118165783|gb|ABK66680.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 372

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 22/274 (8%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P +     P+ F +   P     M K   AI    TE  GG+D A             Y 
Sbjct: 92  PNIMFKATPEQFEKYARPVIDGIMSKAYTAI----TEASGGSDPARAIKLKATRDGSSYL 147

Query: 228 LSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           L+G K W   +P +D  ++ A+  EGR G  +   +LE G+P G+ + R+       S A
Sbjct: 148 LNGSKMWISHAPDADWGVVYARTGEGRHG--ISAFILEKGTP-GVTFSRIPVMA---SFA 201

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
             EL F N       L+G+         +  +   +  A   +   + +L  A  +AR R
Sbjct: 202 PYELHFDNVRLPAEQLIGEEGQGFSLAGEFLVHGRIVYAAGPIGIAQSALDMACRWARDR 261

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            V GG L D+  ++  + D  +D+ AA  L ++ A++ D  +         R+ A + K 
Sbjct: 262 DVFGGRLADKQGIQWMLVDSEVDLRAARLLMYQAASNADLGRD-------VRVDASVAKM 314

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +  + A  V+   ++  G  G   E  + R +R+
Sbjct: 315 FGTEAAYRVLDRCIQIHGALGISTELPLERWFRD 348


>gi|262372652|ref|ZP_06065931.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262312677|gb|EEY93762.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 431

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 26/226 (11%)

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--- 278
           +G + ++G K  +     +D F++ A+  G+   F+V            C + +  K   
Sbjct: 221 NGQFYITGEKTLVVLGDTADVFLVSAEYNGQPDIFVVQ-----------CDESIAIKSNP 269

Query: 279 -IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +G ++  T  L+F+ T    L D +       D+  L++   A+ +   ++   A  I 
Sbjct: 270 AMGLKAAETAILQFNRTPALRLCDADFDYTAFVDLGNLMWCAMAVGTCEAIK---AYCIK 326

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +  +  +   IAD+A++I A   L    A+  +  +    EA  AR++ 
Sbjct: 327 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLVLNAASLAEAGQPFHREAYLARLL- 385

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 386 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 425


>gi|165870944|ref|ZP_02215596.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|227817779|ref|YP_002817788.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|254753149|ref|ZP_05205185.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|164713453|gb|EDR18978.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|227005338|gb|ACP15081.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|160915981|ref|ZP_02078189.1| hypothetical protein EUBDOL_02009 [Eubacterium dolichum DSM 3991]
 gi|158432457|gb|EDP10746.1| hypothetical protein EUBDOL_02009 [Eubacterium dolichum DSM 3991]
          Length = 379

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y ++G K F+++   +D +++ A  +   G   
Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVKDGDDYIINGSKIFITNAGEADIYVIFAMTDKSQGTRG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           +   +LE G P G    + + K+G R++AT EL F+N   +   LLG         +  K
Sbjct: 181 ISAFILEKGMP-GFTIGKHEKKLGIRASATCELIFNNVRVSKDHLLGQEG------KGFK 233

Query: 314 ILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +  LD   + ++   + +A     EA+ Y + R   G  +      +  +AD+     
Sbjct: 234 IAMQTLDGGRIGIAAQALGIAQGAIDEAVAYVKSRKQFGRPIAKFQNTQFQLADMQTKTD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A + +  +  +  AA A++ A        ++A  V  +A++ +GG GY  +
Sbjct: 294 AARLLVYNAAMAKENGQPYTFAAAEAKLFA-------AEVAMEVTTKAVQLLGGYGYTRD 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R +R++    I  G+
Sbjct: 347 YPVERMFRDAKITEIYEGT 365


>gi|289706687|ref|ZP_06503035.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289556607|gb|EFD49950.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 408

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 27/257 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T  A+G  GLTE   G+D A++T+  ++   G + L G K W   + ++D  I+ A
Sbjct: 131 PRMTTGEAVGCFGLTEPGAGSDPASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWA 190

Query: 248 QV----EGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFL 298
           Q     +GR V  F+VP         G   + +  K+  R++   E+            L
Sbjct: 191 QTGEPGDGRGVRGFVVPT-----DTPGFRAEAITQKLSMRASVQCEIHLDGVRLPASAML 245

Query: 299 LGDLNVS-TGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMK 356
             D  V   GP + +    Y    I    G  R S    + YA +R   G  L    + +
Sbjct: 246 PADSAVGLKGPFQCLNEARY--GIIWGAMGAARDSFDAVLDYAMQRQQFGVPLASHQLTQ 303

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I     L+ ++  + D              M    K   C++A  +  EA 
Sbjct: 304 AKLADMAVAIGKGYLLAHQIGRAKDAGP-------LTPAMISAGKLDNCRVAIGIAREAR 356

Query: 417 ECIGGSGYIEERSIARH 433
           E +GG+G   E S  RH
Sbjct: 357 EMLGGNGITLEHSPLRH 373


>gi|288923184|ref|ZP_06417328.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345470|gb|EFC79855.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 398

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 32/260 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVGCF--LVPRLLE 263
           G+D++A++++  K +DG Y ++G K +L++  +   + L     EG    +  +   LLE
Sbjct: 135 GSDVSAVSTKATKQADGSYSITGQKMWLTNGATSTLVALLCKTDEGADSVYRNMTTFLLE 194

Query: 264 DGSPNGLCYQRLK-----NKIGNRSNATVELEF-------SNTFGFLLGD--LNVSTGPV 309
             +  G   Q +      +K+G +   T EL             G   G    +V  G V
Sbjct: 195 KEAGFGETAQGVTVPGKIDKMGYKGVETTELLLDGHQIAAEQILGGQPGKGFFHVMDG-V 253

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  ++ +   +  ++  G  +++A    YA++R   G ++ D   +   IAD+A  +  A
Sbjct: 254 EVGRVNVAARACGLAWRGFELAVA----YAQQRRTFGKVIADHQAVLFRIADMATKVETA 309

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  R A   +  +    EA  A+++A        + A  V+ ++    GG GY +E  
Sbjct: 310 HTMMVRAARLKETGRRMDVEAGMAKMVA-------SEYANEVVEDSFRIHGGYGYSKEYE 362

Query: 430 IARHYRESPANSILLGSGNA 449
           I R  RE     +L+G G +
Sbjct: 363 IERLMRE--VKFMLIGEGTS 380


>gi|257056998|ref|YP_003134830.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586870|gb|ACU98003.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 402

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 33/265 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAIT+   K  D  Y L+G K F++S   +DA ++ A ++   G   +
Sbjct: 132 MAITEPGCGSDSAAITTTATKDGDD-YILNGEKIFVTSGERADAVVVWATLDKSKGRAAI 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
              ++E G+P G    RL++K+G R++ T  L F N     +   N+   P  D K    
Sbjct: 191 KSFVVEKGTP-GFEVVRLEHKLGIRASDTAVLRFDNC---RVPKENLLGSPEIDTKKGFA 246

Query: 314 -ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIA-----DIAL 364
            ++   D+    V+ M + +A  A+   R+     GI +  D+P M +  A     ++  
Sbjct: 247 GVMQTFDNTRPLVAAMAIGVARAALEETRKLLAEAGIEVDYDKPAMAQHAAAATFLELEA 306

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GG 421
           D  AA   +   A   D  K  S +A+ A+           K    V+   ++C+   G 
Sbjct: 307 DYEAAYLTTMEAAWMADNRKPNSLQASMAK----------AKAGRTVVDITLKCVELAGT 356

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY EE  + +  R+S    I  G+
Sbjct: 357 LGYTEESLLEKWARDSKILDIFEGT 381


>gi|312385227|gb|EFR29779.1| hypothetical protein AND_01014 [Anopheles darlingi]
          Length = 425

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 126/316 (39%), Gaps = 48/316 (15%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S++  + T    K + PK+ S+E+  +               L+E   G+D  ++ +  +
Sbjct: 139 SLMIKLGTEEQKKKYLPKL-SQEFSGS-------------FALSEPSAGSDAFSLKTTAK 184

Query: 220 KISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           K  DG  Y L+G K W  +S +S  F+++A      G   +   + +    G    + ++
Sbjct: 185 K--DGNHYVLNGTKMWISNSDISGVFLIMANANPSAGYRGITTFIVEREYEGFTVGKRES 242

Query: 278 KIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G  ++ T  L   N         G        + G         +L+   + +    +
Sbjct: 243 KLGICASGTCTLHLDNVRVPEENILGEFGKGYQYAAG---------FLNEGRIGIGAQMI 293

Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            LA+      I Y   R   G  L     M+  IA +A +I AA  L +  A        
Sbjct: 294 GLAQGCLDATIPYLLERKQFGSDLYSFQGMQHQIATVATEIEAARLLVYNAA-------- 345

Query: 386 RSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           R +EA    +  A + KY+  ++A     + ++ +GG G+ ++    + YR+    +I  
Sbjct: 346 RLQEAGVPFLKQAAMAKYYASEVAQRATVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYE 405

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ N  +  +  +L K
Sbjct: 406 GTTNMQLSTIAKVLRK 421


>gi|300119669|ref|ZP_07057211.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|298722964|gb|EFI63864.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|228923735|ref|ZP_04087013.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835864|gb|EEM81227.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 608

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|215405139|ref|ZP_03417320.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
 gi|289746949|ref|ZP_06506327.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
 gi|289687477|gb|EFD54965.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
          Length = 401

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L +  GR  +
Sbjct: 131 MAITEPEFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSLGRPAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL++K+G + + T  + F N     G LLG+  +  G   
Sbjct: 190 KSFIVPREYP-----GVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGK-G 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMKRAIA-----DI 362
              ++   D+    V+ M V +  A     R  ++G    I  D+P   ++ A      +
Sbjct: 244 FAGVMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+       ++K    +MA  V  + +E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNNIPNSKEAS-------MSKAKAGRMASDVTCKTVELAGTT 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQSLLEKWARDSKILDIFEGT 380


>gi|197101403|ref|NP_001127611.1| glutaryl-CoA dehydrogenase, mitochondrial [Pongo abelii]
 gi|55732530|emb|CAH92965.1| hypothetical protein [Pongo abelii]
          Length = 438

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 21/241 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  +E  +H AR+    R   G  L    ++ + +AD+  +I      
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYTLDRMQFGVPLARNQLILKKLADMLTEITLGLHA 349

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + R
Sbjct: 350 CLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIR 402

Query: 433 H 433
           H
Sbjct: 403 H 403


>gi|327403341|ref|YP_004344179.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327318849|gb|AEA43341.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 396

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ +  + + D  Y L+G K W  ++P +D  ++ A+ E GR+   +
Sbjct: 136 FGLTEPDHGSDPGSMITNFKDMGDH-YLLNGAKMWISNAPFADIAVVWAKDETGRIHGLV 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +E     G     +  K+  R+++T EL F N     +   N+  G       L  
Sbjct: 195 VERGME-----GFSTPEMHGKLSLRASSTGELIFVNV---KVPKENLLPGRSGLGAPLSC 246

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LDSA   ++   +  A     +A+ Y++ R   G  +    + ++ +A++  +I  A  +
Sbjct: 247 LDSARFGIAWGALGAAMDCYDQALRYSKERTQFGVPIGAFQLTQKKLAEMITEITKAQFI 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R+    +E ++ S        M  + K    ++A  +  EA +  GG G   E S+ R
Sbjct: 307 TLRVGELRNEGRATSS-------MISMIKRNNVEIALNIAREARQIHGGMGITSEYSMMR 359

Query: 433 H 433
           H
Sbjct: 360 H 360


>gi|302864586|ref|YP_003833223.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315500879|ref|YP_004079766.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302567445|gb|ADL43647.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315407498|gb|ADU05615.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 382

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 44/299 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           T      W PK+ S E                G GLTE   G+D     ++ + + DG  
Sbjct: 103 TEEQKAQWLPKLLSGE-------------ALAGFGLTEPGTGSDAGG--TRTRAVLDGDE 147

Query: 226 YCLSGHKWFLSSPMSD--AFIMLAQVEGRV---GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           + ++G K F+++  +D  A + +  V G     G  L   ++  G+P G       +K+G
Sbjct: 148 WVINGSKAFITNSGTDITALVTVTAVTGTRPDGGKELSTIIVPSGTP-GFTVAPGYSKVG 206

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---- 333
             ++ T EL F +       LLG+     G  + ++IL   D   ++++ + V LA    
Sbjct: 207 WNASDTHELTFDDCRVPAANLLGERG--RGFAQFLRIL---DEGRIAIAALAVGLAQGCV 261

Query: 334 -EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E+I YA+ R   G  + +   ++  IAD  +++ A TA   RLA  + +A +R      
Sbjct: 262 DESIKYAKERQAFGQPIGNYQAIQFKIAD--MEMKAHTA---RLA--YYDAAARMLAGEP 314

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +  A I K     +A     EA +  GG G++ E  +AR +R+S    + +G G + V
Sbjct: 315 FKRQAAIAKLHASTVAVDNAREATQIHGGYGFMNEYPVARFWRDS--KILEIGEGTSEV 371


>gi|229163979|ref|ZP_04291918.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus R309803]
 gi|228619481|gb|EEK76368.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus R309803]
          Length = 600

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|217962475|ref|YP_002341047.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|217063480|gb|ACJ77730.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|332535044|ref|ZP_08410858.1| branched-chain acyl-CoA dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035513|gb|EGI72008.1| branched-chain acyl-CoA dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 385

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ ++     D  Y ++G K F+S +  ++  +++A+  G     +  F
Sbjct: 124 LTEPGSGSDAASLKTKAVLEGDE-YVINGSKMFISGAGETEVLVVMARTGGEGAAGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VP         G+ Y + + K+G  +  T  + F +     +   N+     E  K  +
Sbjct: 183 VVP-----ADAKGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAHNLLGAEGEGFKFAM 234

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  ++ A  S+   + +L  A  Y + R   G  L     ++  IAD+  ++ AA 
Sbjct: 235 QGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFKIADMNTELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  RLA +F    +  E+  Y      + K +   +   V  +A++  GG GYI+E  +
Sbjct: 295 QM-VRLA-AFKLDNNDVEKTTYC----AMAKRFATDVGFTVCNDALQIHGGYGYIKEYPL 348

Query: 431 ARHYRESPANSILLGSGNAM 450
            RH R+   + IL G+   M
Sbjct: 349 ERHVRDVRVHQILEGTNEIM 368


>gi|302865444|ref|YP_003834081.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315501992|ref|YP_004080879.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302568303|gb|ADL44505.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315408611|gb|ADU06728.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 387

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 121/283 (42%), Gaps = 28/283 (9%)

Query: 194 TSVAIGLG-----LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           T VA G G     L+E   G+D AA+T++  +  D  + L+G K W  ++ +S+ + + A
Sbjct: 118 TPVAAGEGMFSYCLSEPEAGSDAAAMTTKAVRDGDH-WVLNGVKRWITNAGVSEYYTVFA 176

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +       +   + + S  G+ +   + K+G + + T E+ F N    +  D  +   
Sbjct: 177 VTDPTARSKGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAE 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
            TG    MK    LD   ++++   V +A+     A  Y + R   G  + D   ++  +
Sbjct: 235 GTGFATAMKT---LDHTRVTIAAQAVGIAQGALDYAKGYVQERKQFGKPVADFQGIQFML 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMEC 418
           AD+ + + AA  L++  A        RSE   A         K +    A  +  +A++ 
Sbjct: 292 ADMGMKLEAARQLTYAAAG-------RSERGDADLTYFGAAAKCFASDAAMEITTDAVQL 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +GG GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 345 LGGYGYTRDYPVERMMRDAKITQIYEGTNQVQRIVMARQLLKG 387


>gi|111022067|ref|YP_705039.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821597|gb|ABG96881.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 131 LSEREAGSDAASMRTRAKADGDD-WILNGSKCWITNGGKSSWYTVMAVTDADKGANGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +   +  G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 190 FMVHENDEGFVVGPKEKKLGIKGSPTAELYFENC--KIPGDRIIGEPGTGFKTALQTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 248 TRPTIGAQAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 308 SA-----ARAERGEKNLGFISAA-AKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKITQIYEGT 372


>gi|311248915|ref|XP_003123377.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like isoform 2
           [Sus scrofa]
          Length = 462

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 52/297 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y L+G K W  +SP++D F++ A+ E      +
Sbjct: 165 FGLTEPNHGSDPGSMETRARHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNC---I 221

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 222 RGFLLEKGM-RGLSAPKIEGKFSLRASATGMIIMDDVEVPEEN----VLPKASSLAGPFG 276

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   +S   +  AE  +H AR+    R   G  L    +++R +AD+  +
Sbjct: 277 ------CLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTE 330

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K   E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 331 ITLGLHACLQLGRLKDQDKVTPE-------MVSLLKRNNCGKALDIARQARDMLGGNGIS 383

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           +E  + RH               AM L+ +N  E G  +  + F+  E  LG  G +
Sbjct: 384 DEYHVIRH---------------AMNLEAVNTYEGGAQVSGRGFA--ETSLGKRGAR 423


>gi|311108314|ref|YP_003981167.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763003|gb|ADP18452.1| acyl-CoA dehydrogenase, N-terminal domain protein 19 [Achromobacter
           xylosoxidans A8]
          Length = 387

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP         +G++E+  G+D+A++ ++ ++  D  Y +SG K W  +   +D   +L 
Sbjct: 112 APAIAGEAVASIGVSEQGAGSDVASLKTRARRDGDD-YVISGSKMWITNGTQADWICLLC 170

Query: 248 QV-EG---RVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNAT-------VELEFSNTF 295
              EG   +    +V  L E+G    G+  Q+++ K+G  S+ T       V +   N  
Sbjct: 171 NTSEGNPHKNKSLIVVPLRENGKRVRGVEVQKIR-KLGMWSSDTAQIFLDEVRVPVRNRI 229

Query: 296 GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           G          G +  MK      LD A   ++ + + + E + Y R+R   G  L+D  
Sbjct: 230 G------EEGMGFIYQMKQFQEERLDGAARRLAAI-MWIQETVDYLRQRQAFGRPLLDNQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-----PITKYWCCKMA 408
            ++  +A++  ++ A   L +    ++ E     E A+ A++ A      IT  WC    
Sbjct: 283 YIQFKLAELKTELEALRGLIYLATQTYIEGGDVVELASMAKLKAGRLSREITD-WC---- 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                  M+  GG GY  +  ++R YR+    SI  G+   M++
Sbjct: 338 -------MQFQGGMGYTWDNPVSRAYRDYRLCSIGGGADEVMLM 374


>gi|121592538|ref|YP_984434.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604618|gb|ABM40358.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 384

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 28/265 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQ--KISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
           + +TE   G+D+ ++ +     K S+G  Y ++G K F+++ + S+  I++A+    +G 
Sbjct: 126 IAMTEPGAGSDLKSVRTTATLVKSSEGDHYVINGSKTFITNGINSELVIVVAKTAPELGA 185

Query: 256 FLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             V  ++ E+G+P G    R   KIG  +  T EL F N       LLG+ N+       
Sbjct: 186 KGVSLIVVEEGTP-GFSKGRKLEKIGLMAQDTSELFFDNVRVPVDNLLGEPNMG------ 238

Query: 312 MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K L++      L  A+ + S +   L + I Y R R   G     QPV      +    
Sbjct: 239 FKYLMHELAQERLVVAVRAASCIETFLQKTIDYTRERKAFG-----QPVFD--FQNSRFK 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +A A A +  L    DE      +       A + K     +   ++ E ++  GG GY+
Sbjct: 292 LAEAKAQATMLRTFVDECMKLHMQRKLTPERAAMVKLNATALQNKLLDEFLQLHGGYGYM 351

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  + R + ++    I  GS   M
Sbjct: 352 TEYQVGRAWTDARIGRIYGGSDEIM 376


>gi|15807996|ref|NP_285660.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460740|gb|AAF12445.1|AE001863_70 glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 386

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 17/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE  GG+D   + ++ +K   G Y L+G K W  +SP++D  ++ A+  E  V  F+
Sbjct: 130 FGLTEPDGGSDPGGMRTRARK-DGGDYVLNGSKMWITNSPLADVAVVWAKDDEDVVRGFI 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR        G    ++ +K+  R++ T E+   +        L  S G    +  L  
Sbjct: 189 VPR-----DARGFSTPKIGHKMSLRASTTGEIVLEDCRIPAENLLPGSRGLKSPLGCLTS 243

Query: 318 LDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             S I   ++  +   L  ++ YA  R   G  +  + +++  +A +A   +  + L++R
Sbjct: 244 ARSGIAWGAMGALESVLTASLEYAGSRTTFGRPIAARQLVQEKLAWMATQHSLGSLLAWR 303

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L N  D  +       YA++   + K    ++A      A E  GG+G   E  + RH
Sbjct: 304 LGNLKDGGQMN-----YAQV--SVAKGNNVRVALEGARMAREIHGGNGITTEYPVIRH 354


>gi|75760335|ref|ZP_00740383.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903506|ref|ZP_04067630.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           4222]
 gi|228910842|ref|ZP_04074651.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           200]
 gi|229076384|ref|ZP_04209349.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-18]
 gi|229099462|ref|ZP_04230391.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-29]
 gi|229118476|ref|ZP_04247830.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-3]
 gi|229175701|ref|ZP_04303209.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus MM3]
 gi|74492189|gb|EAO55357.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228607842|gb|EEK65156.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus MM3]
 gi|228665046|gb|EEL20534.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-3]
 gi|228683958|gb|EEL37907.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-29]
 gi|228706819|gb|EEL59027.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-18]
 gi|228848793|gb|EEM93638.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           200]
 gi|228856127|gb|EEN00663.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           4222]
          Length = 600

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----EYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|237800684|ref|ZP_04589145.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023543|gb|EGI03600.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 387

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D +++ A+ +       +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 SAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|120405043|ref|YP_954872.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957861|gb|ABM14866.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 386

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 43/280 (15%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P+  +  A+G  GLTE  GG+D  A T    ++ DG + ++G K F+++
Sbjct: 106 FGTEAQKQEWLPLLASGKALGAFGLTEAGGGSDAGA-TKTTARLDDGHWVINGSKQFITN 164

Query: 238 PMSD--AFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
             +D    + +  V G   G   +  +L      G   +   NK+G  ++ T  L F   
Sbjct: 165 SGTDITKLVTVTAVTGETDGKKEISSILVPVPTPGFTAEPAYNKVGWNASDTHPLSFD-- 222

Query: 295 FGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 D+ V   P E++           L  LD   ++++ + V  A     E++ YA+
Sbjct: 223 ------DVRV---PQENLLGERGRGYAGFLRILDEGRIAIAALSVGAAQGCVDESVKYAK 273

Query: 341 RRHVSGGILIDQPVMKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            RH  G          RAI     IA  IA   A +     ++ +A +        +  A
Sbjct: 274 ERHAFG----------RAIGTNQAIAFKIARMEARAHAARAAYYDAAALMLAGKPFKKAA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + K    + A     +A +  GG G++ E  +ARHYR+S
Sbjct: 324 AVAKLVSSEAAMDNARDATQIFGGYGFMNEYPVARHYRDS 363


>gi|30023042|ref|NP_834673.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|229130260|ref|ZP_04259219.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-Cer4]
 gi|229153195|ref|ZP_04281374.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1550]
 gi|29898602|gb|AAP11874.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228630294|gb|EEK86944.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1550]
 gi|228653193|gb|EEL09072.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-Cer4]
          Length = 600

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|84500380|ref|ZP_00998629.1| glutaryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84391333|gb|EAQ03665.1| glutaryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 408

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++ +K ++G Y L+G K W  ++P++D F++ A+ +   G   +
Sbjct: 150 FGLTEPDAGSDPAGMKTRARK-TEGGYVLNGAKMWISNAPIADVFVVWAKSDAHDGA--I 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKIL 315
              + D    GL   ++  K+  R++ T E+   +   G   LL  ++   GP       
Sbjct: 207 RGFVLDKGMKGLSAPKIGGKLSLRASITGEIVLDDVEVGEEALLPHVSGLKGP------F 260

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   +  R++       ++P     + ++ +AD+  +I    
Sbjct: 261 GCLNRARYGIAWGVMGAAEDCWFQARQYGLDRKQFNKPLAGTQLYQKKLADMQTEITLGL 320

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R+   FDEA++  E       M  + K   C  A  +   A +  GG+G   E  +
Sbjct: 321 QAALRVGRLFDEARAAPE-------MVSLIKRNNCGKALDIARTARDMHGGNGIQIEYKV 373

Query: 431 ARH 433
            RH
Sbjct: 374 MRH 376


>gi|308509436|ref|XP_003116901.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
 gi|308241815|gb|EFO85767.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
          Length = 412

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 25/244 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G++   + ++     +   Y LSG K W  +SP++D  ++ A+   R G  +
Sbjct: 152 FGLTEPNHGSNPGGMETKATWDETTKTYKLSGSKTWISNSPVADVMVVWAR-SSRHGNKI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              +LE G   GL   +++ K+  R++ T ++   +       LL ++    GP      
Sbjct: 211 KGFILERGM-KGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLAGPFG---- 265

Query: 315 LIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369
              L++A + ++ G   +  E  H AR+    RH  G  L    +M+  +AD+  +I+  
Sbjct: 266 --CLNNARLGIAWGALGAAEECFHLARQYTLDRHQFGRPLAQNQLMQLKMADMLTEISLG 323

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R++   DE K + E+ +       I K   C  +  +  +A + +GG+G ++E  
Sbjct: 324 LQGCLRVSRLKDEGKVQPEQIS-------IIKRNSCGKSLEIARKARDMLGGNGIVDEYH 376

Query: 430 IARH 433
           I RH
Sbjct: 377 IMRH 380


>gi|300245625|gb|ADJ93870.1| putative benzoate-degrading protein BamM [Clostridia bacterium
           enrichment culture clone BF]
          Length = 170

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 12/137 (8%)

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD   + ++   + +A+     A++YA+ R   G  +     ++  +AD+A  I AA
Sbjct: 27  MVTLDYGRLGIAAQALGIAQGAYEAALNYAKERQQFGQAIARFQAIEFKLADMATQIDAA 86

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A      +  S+EAA A       K +C  +A +V  EA++ +GG GY  +  
Sbjct: 87  RLLLYRAAYLASTVEKVSKEAAMA-------KMYCSDVAMSVTVEAVQILGGYGYSRDYP 139

Query: 430 IARHYRESPANSILLGS 446
           + R  R++    I  G+
Sbjct: 140 VERMMRDAKITQIYEGT 156


>gi|218235541|ref|YP_002369806.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218163498|gb|ACK63490.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 594

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D FI+ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|195571535|ref|XP_002103758.1| GD20592 [Drosophila simulans]
 gi|194199685|gb|EDX13261.1| GD20592 [Drosophila simulans]
          Length = 415

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 28/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 156 LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLRHKGITA 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL P+ +      GL   + ++K+G R+ +T +L   +     +    V   P +  KI 
Sbjct: 215 FLTPKDVP-----GLSIAKKESKMGMRATSTCQLVLEDVH---VPRSRVLGAPGDGFKIA 266

Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++     +A+A     + YA++R   G  L    ++++ +AD+A  +  +
Sbjct: 267 MQSLDCGRIGIAAQATGIAQAALELAVDYAQKRVAFGKQLARLQLIQQKLADMATRVEIS 326

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R A   D     ++EAA A++       +C         + ++ +GG GY  +  
Sbjct: 327 RLLTWRAAWLKDNGLPITKEAAMAKLHGSEAATFCAH-------QCIQILGGMGYTTDLP 379

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
              +YR +    I  G+     + + N
Sbjct: 380 AELYYRNARVTEIYEGTSEIQRIVIAN 406


>gi|206968909|ref|ZP_03229864.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH1134]
 gi|206735950|gb|EDZ53108.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus AH1134]
          Length = 382

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P ++R + ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|150025970|ref|YP_001296796.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772511|emb|CAL43994.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 379

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 36/273 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P+ K  V     L+E   G+D  A + +   I  G  Y L+G K W  +   +  +I++A
Sbjct: 113 PLAKGDVIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYLLNGTKNWITNGGTATTYIVIA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q +   G   +   + +    G      + K+G R         S+T   +  D+ V   
Sbjct: 171 QTDIEKGHKGINAFIVEKGWAGFEIGPKEKKMGIRG--------SDTHSLMFTDVKV--- 219

Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQP 353
           P E+   +     + A+  ++G R+ +A             A+ YA+ R      + +  
Sbjct: 220 PKENRIGEDGFGFNFAMAVLNGGRIGIASQALGIATGAYELALKYAQERIAFKKPIFEHQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           V+   +AD+A  I AA  L  + A   D  +  S+  A A++ A  T       A     
Sbjct: 280 VIAFKLADMATQIMAAKMLVLKAATEKDAGQDISQSGAMAKLFASET-------AMNTTI 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           EA++  GG+GY+ E  + R  R++    I  G+
Sbjct: 333 EAVQIHGGNGYVSEYHVERMMRDAKITQIYEGT 365


>gi|84687018|ref|ZP_01014901.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664992|gb|EAQ11473.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Rhodobacterales bacterium HTCC2654]
          Length = 385

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 27/264 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGR 252
           + + +TE   G+D+A I ++  ++ D  + L+G K ++S+      +++A          
Sbjct: 122 LAIAMTEPGTGSDLAGIKTRAVEMDDH-WVLNGSKTYISNGFLAGLVIVAAKTNPDASHE 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VG FLV    EDG   G    R   K+G  S  T EL F +     +   NV   P    
Sbjct: 181 VGLFLV----EDGM-EGFSRGRNLKKMGLESQDTAELFFDDV---KVPKANVLGDPKGGF 232

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K ++       L+ A+  V+    +    + +   R   G  +      +  +A +  +I
Sbjct: 233 KTMMLNLAEERLNGAVGFVARAERAFEITMEFIMDRRAFGKPIGTFQNSRFKMASMRTEI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL         + +  +E       MA   K +  ++   V+ E ++  GG+GY+E
Sbjct: 293 DAAQALVDHCVREHLKGELSAE-------MASEAKLFTSEVEGRVVDECVQLHGGAGYME 345

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  I+R YR++  + I  G+   M
Sbjct: 346 EYEISRLYRDARISRIYAGTSEIM 369


>gi|296169727|ref|ZP_06851344.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895624|gb|EFG75321.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 382

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  GG+D+  + +    + DG  Y ++G K +++S +   +++ A   G  G   V
Sbjct: 124 LAITEPGGGSDVGHLRTT--AVLDGDHYVVNGAKTYITSGVRADYVVTAVRTGGPGAAGV 181

Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             L+ E G+P G    R   K+G RS+ T EL F +       L+G  N     +    +
Sbjct: 182 SLLVVEKGTP-GFEVSRKLAKMGWRSSDTAELSFVDARVPAANLVGPENSGFLQIAQAFV 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S 
Sbjct: 241 SERIGLAAQAYSSAQRCLDLTLQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSR 300

Query: 375 RLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +       ++    E  +A+  A     W       V  +A++  GG GY+ E  + R 
Sbjct: 301 NVVERQLAGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQ 353

Query: 434 YRESPANSILLGSGNAMVLDVL 455
           YR+     + +G G   +L  L
Sbjct: 354 YRD--MRILGIGGGTTEILTAL 373


>gi|172060313|ref|YP_001807965.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171992830|gb|ACB63749.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 609

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 48/271 (17%)

Query: 253 VGCFLVPRLL--EDGSPNG----LCYQRLKNKIGNRSNATVELEF-----------SNTF 295
           +  F+VP+ L  +DG+  G    +    L +K+G R      L F           +   
Sbjct: 233 ISLFIVPKYLPADDGAARGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGAI 292

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI-- 348
           G+L+G+ N     +  M     ++ A + V    V+L       A+ YAR R     +  
Sbjct: 293 GYLVGEPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYARNRPQGRALGP 347

Query: 349 -----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAA 391
                      ++  P ++R +      +    AL    A   DEA++      R+E A 
Sbjct: 348 AGKDAAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHGDAAVRAEAAQ 407

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I+ PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     
Sbjct: 408 LLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQA 467

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           LD+L    K       L  TL+  +G++ ++
Sbjct: 468 LDLLG--RKVGQDDGALLRTLDARIGATVQR 496


>gi|108798478|ref|YP_638675.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867579|ref|YP_937531.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768897|gb|ABG07619.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693668|gb|ABL90741.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 615

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 55/295 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGR-------- 252
           LTE   G+D+ A  ++     DG + + G K F+++   D A  +L  V  R        
Sbjct: 164 LTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVG 223

Query: 253 ------VGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296
                 +  FLVP+   D       G  NG+    ++ K+G   + T EL   +     G
Sbjct: 224 GPGTKGLSLFLVPKFHFDPDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARG 283

Query: 297 FLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID- 351
           +LLG+++         +ED ++++       +++ +      A+ YA++R V G  L   
Sbjct: 284 WLLGEVHDGIAQMFEVIEDARMMV----GCKAIATLSSGYLNALDYAKQR-VQGADLAQM 338

Query: 352 ------------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS---EEAAYAR-- 394
                        P ++R++           +L    A+  DE   ++   E+AA A   
Sbjct: 339 SDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAV 398

Query: 395 --IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             ++ PI K +  + +  V+  E+++  GGSGY+ E  I ++ R++  +++  G+
Sbjct: 399 NDLLLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGT 453


>gi|268534228|ref|XP_002632245.1| Hypothetical protein CBG07125 [Caenorhabditis briggsae]
 gi|187033605|emb|CAP27240.1| hypothetical protein CBG_07125 [Caenorhabditis briggsae AF16]
          Length = 409

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 38/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQ---VEGRVGCF 256
           LTE   G+D A+I +   K  D  Y ++G K F+S   +  + F+M+ Q     G  G F
Sbjct: 146 LTEPDAGSDAASIRTTATKKGD-YYVVNGSKAFISGAGTSNNYFVMMRQDGAAPGAKGIF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNV 304
            +  ++EDG+  G  Y + ++K+G  S  T  L F +             FGF +    +
Sbjct: 205 CL--MIEDGT-EGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGL 261

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G V         + A  S+   + S+  AI + + R   G  L D    +  +A++A 
Sbjct: 262 NGGRV---------NIASCSLGAAQRSMDLAIEHLKCRKQFGKTLSDFQYNQFKLAELAT 312

Query: 365 DIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  +  +    A   D +   +    A A++ A    +        V+  A++  GG G
Sbjct: 313 KLVTSRLIVRAAAEQLDNDDPEKVALCAMAKLHATDNCF-------EVVNGALQMFGGYG 365

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           ++++  I ++ R+   + IL G+   M L
Sbjct: 366 FLKDYPIQQYLRDIRVHQILEGTNEMMRL 394


>gi|107101443|ref|ZP_01365361.1| hypothetical protein PaerPA_01002483 [Pseudomonas aeruginosa PACS2]
 gi|116049966|ref|YP_791224.1| citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|313111172|ref|ZP_07796995.1| Citronelloyl-CoA dehydrogenase GnyD [Pseudomonas aeruginosa 39016]
 gi|115585187|gb|ABJ11202.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|310883497|gb|EFQ42091.1| Citronelloyl-CoA dehydrogenase GnyD [Pseudomonas aeruginosa 39016]
          Length = 387

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++ D  + L+G K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRVGD-RFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 187 TAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDV---EVPEENVLGAVNGGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  V + +A     + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAAACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|330890782|gb|EGH23443.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 387

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|329901359|ref|ZP_08272804.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327549140|gb|EGF33735.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 394

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 39/285 (13%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           PK+ S EY              IG L ++E   G+D+ ++  +     D  + L+G K W
Sbjct: 118 PKLVSGEY--------------IGALAMSEPNAGSDVVSMKLRADWKGD-RWVLNGTKMW 162

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-- 291
             + P +D  ++ A+ +   G   +   L +    G    +  +K+G R + T EL F  
Sbjct: 163 ITNGPDADVLVVYAKNDLEAGARGMTAFLIEKDFKGFSVAQKLDKLGMRGSHTGELVFRD 222

Query: 292 -----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARR 341
                 N  G L   +NV         ++  LD     +SG     M+  +  A+ Y   
Sbjct: 223 CEVPAENVLGGLGKGVNV---------LMSGLDYERAVLSGGPLGIMQACMDVAVPYVHD 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +M+  +AD+   + A  A  + +  + D A S     A  +  A    
Sbjct: 274 RKQFGQPIGEFQLMQGKLADMYSTMMACKAYVYAVGQACDRAASPEAVRALRKDAAGAIL 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           Y   + A  +  E ++ +GG+GYI E    R +R++    I  G+
Sbjct: 334 Y-SAEKATWMAGETIQALGGNGYINEYPAGRLWRDAKLYEIGAGT 377


>gi|325928744|ref|ZP_08189914.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325540912|gb|EGD12484.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 391

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GL+E +GG+D AA+T++  +  DG + L+G K W  +  ++   I+ A  +  V  FLV
Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKLWITNGSIAGLAIIWAHTDDGVRGFLV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PVEDMKIL 315
                +    G     + +K+  R++ T  L   N F      L  + G   P+  +   
Sbjct: 196 -----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPRAAGLKAPLSCLNQA 250

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y  +     +     L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +
Sbjct: 251 RYGIAWGAIGA-AGACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQ 309

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L    D    + E+ + A       K+  C+MA  V  E  + +G +G   E    RH
Sbjct: 310 LGRLKDAGTLQPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360


>gi|330797571|ref|XP_003286833.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
 gi|325083206|gb|EGC36665.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
          Length = 422

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 34/260 (13%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           A M+K        LTE   G+D A +  + +K+ DG + L+G K W  ++P +D  ++ A
Sbjct: 144 ASMKKIGA---FALTEPNAGSDAAGLQCKAKKV-DGGWLLTGEKRWIGNAPFADVIVVWA 199

Query: 248 QV--EGRVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF------L 298
           +     ++  F+V P+ +   +  G   + +KNKI  RS     + F N F        L
Sbjct: 200 RNVDTNKIHGFIVEPKTV---NQKGCRIETIKNKIALRSVQNGHIYFDNCFIREDQRLPL 256

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVM 355
             D N  +GP       ++L   ++    + +   +  + + Y + R   G  L    ++
Sbjct: 257 ANDFN--SGPGR----CLFLTRVVVGWIALGIASNAYEKCLEYVKNRQQFGQPLAQFQII 310

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +  +  +I A   +  R+++ ++++K    +A        + K +    A  V++ A
Sbjct: 311 QDRLVKMMGNIQAIALMCIRVSSLYEQSKLTLGQAG-------LLKAFASAKAREVVSLA 363

Query: 416 MECIGGSG-YIEERSIARHY 434
            EC GG+G  +++  I R++
Sbjct: 364 RECFGGNGILLDQGGIGRNF 383


>gi|325105524|ref|YP_004275178.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974372|gb|ADY53356.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 380

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  +  +    + D  Y L+G K W  +   +  +I+ AQ +   G   +
Sbjct: 123 FALSEPEAGSDATSQHTTAIDMGDH-YLLNGTKNWITNGGTASIYIVFAQTDVAKGYHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             L+ +    G      +NK+G RS+ T  L F++             FGF L    +  
Sbjct: 182 NALIIEKGMEGFSIGPKENKLGIRSSDTHSLMFTDVKVPKENRLGEDGFGFRLAMETLDG 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G        I + +  + ++     LA   +Y++ R   G  + +   +   +AD+   I
Sbjct: 242 GR-------IGIAAQALGIAAGAYELAR--NYSKERKSFGKPICEHQAIAFKLADMETQI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L ++ A   D+     + +A       I K +  ++A     EA++  GG GY++
Sbjct: 293 EAARLLVYKSAWLKDQKMPYGKSSA-------IAKLYASEVAMQTTIEAVQVHGGYGYVK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYHVERLMRDAKITQIYEGT 365


>gi|296156552|ref|ZP_06839390.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295893151|gb|EFG72931.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 393

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKNGDH-YVLNGTKMWITNGPDCDTLVVYAKTDPEASSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G    M  L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN--GGAKVLMSGL 245

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 246 DY-ERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQPIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D      E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGK--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|297195238|ref|ZP_06912636.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719681|gb|EDY63589.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 396

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 25/263 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D AA+ +  ++  DG  + L+G K W  
Sbjct: 119 FGSEEQKQRWLPGMAAGEIIGCFGLTEPDHGSDPAAMRTHAKR--DGSDWVLTGRKMWIT 176

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFS 292
           +  ++   ++ AQ +  +  F+VP         G     +K+K   R++ T EL   E  
Sbjct: 177 NGSVAGVAVVWAQTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVMDEVR 231

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILI 350
                +L D+    GP   +  L +    I+  S+   R S   A+ YAR R   G  + 
Sbjct: 232 LPADAVLPDVTGLRGP---LSCLSHARYGIVWGSMGAARSSFEAAVSYARTREQFGRPIG 288

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + +  +AD+A+++     L+  L    D  K R E+ ++ ++         C+ +  
Sbjct: 289 GFQLTQAKLADMAVELHKGILLAHHLGVRMDAGKLRPEQVSFGKLNNVREAIEICRTSRT 348

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +       +G +G   E  + RH
Sbjct: 349 I-------LGANGISLEYPVMRH 364


>gi|196038001|ref|ZP_03105311.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus NVH0597-99]
 gi|196031271|gb|EDX69868.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           cereus NVH0597-99]
          Length = 382

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIVNGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|111019296|ref|YP_702268.1| glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818826|gb|ABG94110.1| probable glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 390

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 25/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++ A + +  ++  D  + L+G K W  +  ++D  ++ A
Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTGAKRDGDD-WILNGTKMWITNGSVADVAVVWA 182

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + +  +  F+VP         G     +K+K+  R++ T EL   +       +L +   
Sbjct: 183 RTDDGIRGFVVPT-----DTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKG 237

Query: 305 STGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +GP+    + +  I   +    +   R  L  AI YA+ R V    L    + +  IAD
Sbjct: 238 LSGPLGCLNEARFGIIFGA----MGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL++     L++ L    D   +R E+ +  ++          + A A+  E    +G 
Sbjct: 294 MALEVGKGHLLAYHLGRLKDRGVARPEQVSTGKLNN-------VREAIAIARECRTILGA 346

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 347 NGITLEYPVIRH 358


>gi|126462554|ref|YP_001043668.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104218|gb|ABN76896.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 379

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++     +G Y LSG K F+S    SDA++ + +  G     +   
Sbjct: 124 LTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSDAYLTMCRTGGAGPKGISTL 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
           L+  G+P GL +  L++K+G R+  T +++F      +  DL V     E+ +   Y   
Sbjct: 183 LVPAGTP-GLSFGGLEDKMGWRAQETRQVQFDEC--LVPTDLLVG----EEGRGFAYAMA 235

Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD   ++++   +  A+A   A R +++          +R      LD     AL FRL
Sbjct: 236 GLDGGRLNIAATALGGAQAAFDATRAYMA----------ERKAFGQRLD--GFQALQFRL 283

Query: 377 AN---SFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAME----CI---GGSGYI 425
           A       +A+    +AA+     AP    +C     AV   A E    C+   GG GY+
Sbjct: 284 AEMEVKLQQARIFLRQAAWKLDQGAPDATKFCAMAKLAVTDSAFEVANQCLQLHGGYGYL 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  I +  R+   + IL G+   M + V   L
Sbjct: 344 ADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|74005675|ref|XP_536053.2| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           precursor [Canis familiaris]
          Length = 441

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 31/276 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247
           P   +   IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+      +++ 
Sbjct: 170 PQMVSGKCIGAIAMTEPGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGWLCDVVIVV 227

Query: 248 QVEGRVGCFLVPR----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            V  R    L       L+E+G    +  ++L+ K+G ++  T EL F +       LLG
Sbjct: 228 AVTNREAHSLAHGISLFLVENGMKGFIKGKKLQ-KMGLKAQDTSELFFEDVRLPASALLG 286

Query: 301 DLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           + N      +   P E + I      A + +SG      E  +Y + R+V G  +     
Sbjct: 287 EENRGFYYLMQELPQERLLI------AELGISGSEFMFEETRNYVKERNVFGKKVAHIQT 340

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++   I    A         D      E+       A + KYW  ++   +  +
Sbjct: 341 VQHKLAELKTQICVTRAF-------VDSCLQLHEKKRLDSTTASMAKYWTSELQNRIAYD 393

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            ++  GG GY+ +  +A+ Y ++ A  I  G+   M
Sbjct: 394 CVQLHGGWGYMWDYPVAKAYVDARAQPIYGGTNEIM 429


>gi|262201328|ref|YP_003272536.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084675|gb|ACY20643.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 381

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 47/262 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
           G GLTE   G+D  A  +  +   D  + ++G K F+++  +D  + + +  V G     
Sbjct: 120 GFGLTEPGAGSDAGATATTAKDDGDS-WIINGAKQFITNSGTDITSLVTVTAVTGTKDDG 178

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +   +VP     G+P G   +   NK+G  ++ T  L F+        D+ V   P 
Sbjct: 179 RKEISTIIVP----SGTP-GFTAEPPYNKVGWNASDTHPLSFA--------DVRV---PK 222

Query: 310 EDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           E++           L  LD   ++++ +   +A     E++ YA+ R   G  + +   +
Sbjct: 223 ENLLGTRGRGYANFLSILDEGRIAIAALATGVAQGCVDESVKYAKDRKSFGKPIGEYQSV 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             AIA +      A    +  A      K   +EA+ A+++A        +MA       
Sbjct: 283 SFAIARMEARAHVARTAYYDAAAKMLAGKPFKKEASIAKMIASEAAMDNARMA------- 335

Query: 416 MECIGGSGYIEERSIARHYRES 437
            +  GG G++ E  +ARHYR+S
Sbjct: 336 TQIHGGYGFMNEYPVARHYRDS 357


>gi|219668722|ref|YP_002459157.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219538982|gb|ACL20721.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 382

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR-VGC 255
           LTE   G+D  A+  + +   D      G  +  +  ++  F         Q +G+ + C
Sbjct: 125 LTEPNAGSDAGALRCKAEDRGDHFLVNGGKIFITNGTVATTFCTFVKTDPTQPKGKGITC 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VSTGP 308
            L+ + L      G    +   K+G   + TVEL F N       +LG++N    V+ G 
Sbjct: 185 LLIEKDLP-----GFTISKPVEKMGMHGSPTVELIFENVKVPKENVLGEINNGFAVAMGL 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +   +I I          G+ ++   L   I+Y + R      L     ++  IAD+A  
Sbjct: 240 LAGGRITI-------GAQGLGIAEGALDYTINYIKERQQFDKPLAANQGVQFMIADMATK 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +R A   D     ++EA+ A++ A         +A  V    ++ +GG GY 
Sbjct: 293 IEAAQMLIYRAAWLKDHQLPHNKEASMAKLFA-------TDVAMEVTTNCVQLLGGYGYC 345

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++    I  GS
Sbjct: 346 SEYPVERMMRDAKITQIYEGS 366


>gi|149191211|ref|ZP_01869468.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
 gi|148834960|gb|EDL51940.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
          Length = 389

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 126/275 (45%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +D  ++ A+ E       +
Sbjct: 130 LAMSEANAGSDVISMQLRAERHGDH-FVLNGCKMWITNGPDADVVVVYAKTEPSAAQHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G  + +  +K+G R + T EL F N       +LG++N     VE +   
Sbjct: 189 TAFIIEKQFEGFSHAQKLDKLGMRGSNTCELVFQNCKVPLENVLGEINHG---VEVLMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  L   + Y   R   G  + +  +++  +AD+     AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACLDLVVPYVHERKQFGRSIGEFQLVQAKLADMYTRCNAARAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A++ D  +   +++A   +       +  ++A  +  +A++ +GG+GYI E +  R
Sbjct: 306 LYAVASACDRGEITRKDSAGVIL-------YNAELATQMALDAIQLLGGNGYINEYAAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LF++
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFQE 387


>gi|146276020|ref|YP_001166180.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322711|gb|ABP64654.1| acyl-CoA dehydrogenase domain protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 528

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 40/302 (13%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG L + S  +  ++ L  T      W P I S E  PT                TE   
Sbjct: 219 AGSLGTRSEIAGELIVLGGTETQKARWLPAIASGEVLPTAV-------------FTEPDT 265

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGC--FLVPR 260
           G+D+ ++ S+ ++  DG + + G K W   +  SD   ML +      G  G    LVP+
Sbjct: 266 GSDLGSLQSRARRGEDGGWIIDGAKTWITHASRSDLMTMLVRTVPDARGYAGLSMLLVPK 325

Query: 261 ---LLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
                +D  P  G+    ++  +G R      L+F        GD  +     +  K L+
Sbjct: 326 PRGTQDDPFPAEGMSGSEIE-VLGYRGMREYALQFDGMRA--PGDALLGGEEGQGFKQLM 382

Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  + +A  +V   R +L   + YA  R   G  ++  P +   +A  A+DI  A 
Sbjct: 383 RTFEGARIQTAARAVGVARRALELGLDYALSRKQFGKAIVGFPRVADKLAMGAVDIVMAR 442

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A + D  K    EA  A+++A        + A +    A++  GG+GY  E  I
Sbjct: 443 ELTYAAARAKDSGKRCDIEAGMAKLLA-------ARAAWSNADAALQIHGGNGYALEYEI 495

Query: 431 AR 432
           +R
Sbjct: 496 SR 497


>gi|24660351|ref|NP_648149.1| CG12262 [Drosophila melanogaster]
 gi|28376845|sp|Q9VSA3|ACADM_DROME RecName: Full=Probable medium-chain specific acyl-CoA
           dehydrogenase, mitochondrial; Short=MCAD; Flags:
           Precursor
 gi|7295201|gb|AAF50524.1| CG12262 [Drosophila melanogaster]
 gi|19528339|gb|AAL90284.1| LD22634p [Drosophila melanogaster]
 gi|220956380|gb|ACL90733.1| CG12262-PA [synthetic construct]
          Length = 419

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D++ I ++ +K  D  + ++G K W  +  +++ + +LA+      C     
Sbjct: 156 VTEPGAGSDVSGIKTRAEKKGDE-WVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  SP GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERDSP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     ++  +AD+A+ +   +
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGV-ETS 329

Query: 371 ALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L++RL A   D+ +  S  A+ A+  A         MA  + ++A++  GG+G+  E  
Sbjct: 330 RLAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFNSEYP 382

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 383 VEKLMRDAKIYQIYEGT 399


>gi|89068959|ref|ZP_01156341.1| putative glutaryl-CoA dehydrogenase protein [Oceanicola granulosus
           HTCC2516]
 gi|89045540|gb|EAR51604.1| putative glutaryl-CoA dehydrogenase protein [Oceanicola granulosus
           HTCC2516]
          Length = 417

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D   + ++  KI DG Y +SG K W  ++P++D F++ A+ E   G++  
Sbjct: 159 FGLTEPDAGSDPGGMKTKAVKI-DGGYRISGAKTWISNAPIADVFVVWAKSEAHGGKIRG 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F    +LE G+  GL   ++  K+  R++ T E+      G  +G+  +  G VE +K  
Sbjct: 218 F----VLEKGA-KGLSAPKIGGKLSLRASVTGEIVLD---GVEVGEDALLPG-VEGLKGP 268

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   ++   +  AE     A  Y   R   G  +    + ++ +AD+  +IA  
Sbjct: 269 FGCLNRARYGIAWGTMGAAEYCWHAARTYGLERKQFGRPIAQTQLFQKKLADMQTEIALG 328

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +  L     EA + S EA        + K   C  A  +   A +  GG+G  EE  
Sbjct: 329 LNGALALGRMM-EAHTASPEA------ISLMKRNNCGKALEIARMARDMHGGNGISEEYQ 381

Query: 430 IARH 433
           + RH
Sbjct: 382 VMRH 385


>gi|93005645|ref|YP_580082.1| glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
 gi|92393323|gb|ABE74598.1| Glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 394

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 21/282 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D ++++++ + ++ G Y L+G+K W  +SP+SD F++ A
Sbjct: 127 PKLATGEYVGCFGLTEPDSGSDPSSMSTRARAVAGG-YELTGNKMWITNSPISDVFVVWA 185

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + + G +  F++     D    GL   +++ K   R++ T E+     F        D+ 
Sbjct: 186 KDDAGDICGFIL-----DKGMKGLSAPKIEGKFSLRASVTGEIVMDKVFVPEANAFPDIR 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP   +    Y   A  S+         A  Y   R   G  L    +++  +A++ 
Sbjct: 241 GLKGPFGCLNKARY-GIAWGSMGAAEFCWKAARQYTLDRKQFGRPLAATQLVQLKLANMQ 299

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I      + R+    DE  +  E       M  + K   C  A  +   A +  GG+G
Sbjct: 300 TEITLGLQAALRVGRLMDEDNAAPE-------MISLIKRNNCGKALEIARIARDMHGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             +E  I RH     A +   G+ +   L +L   + G   F
Sbjct: 353 ISDEFHIIRHVMNLEAVNTYEGTHDIHAL-ILGRAQTGIQAF 393


>gi|328771985|gb|EGF82024.1| hypothetical protein BATDEDRAFT_86757 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 411

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 28/263 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCF 256
           LTE   G+D  ++ +   K  D  Y L+G K F+S    +D ++++A+  G     + CF
Sbjct: 157 LTEPGAGSDAGSLATSAVKKGDH-YILNGSKAFISGAGDTDVYVIMARTGGPGPKGISCF 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELE-----FSNTFGFLLGDLNVSTGPV 309
           +V    E G+P GL + + + K+G  S  T  V LE      +N  G       ++   +
Sbjct: 216 IV----EKGTP-GLSFGKKEKKVGWNSQPTRAVILEDCAIPAANLVGKEGQGFGIAMRGL 270

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I    A  S+ G + +L   + Y   R      L     ++  +A++A  + ++
Sbjct: 271 NGGRINI----ASCSLGGAQAALETTVDYVTIRQQFNKPLSANQTVQFKLAEMATSLESS 326

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A   D      E AA A     + K         +  +A++  GG GY++E  
Sbjct: 327 RLLVREAARLVD------ENAASAPAWCAMAKLHATDSCFTIANDALQLHGGYGYLKEYK 380

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           + ++ R+   + IL G+   M L
Sbjct: 381 VQQYVRDLRVHQILEGTNQVMRL 403


>gi|291166778|gb|EFE28824.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
          Length = 379

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
            GLTE   GTD A  T+    + DG  + L+G K F+++ + +D ++++A  +   G   
Sbjct: 123 FGLTEPNAGTDAAGQTTTA--VLDGDEWVLNGSKIFITNAIYADTYVVIAVTDKSQGTRG 180

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V    E G+P G  +   + K+G R +AT EL F N    +     +        
Sbjct: 181 TSAFIV----EKGTP-GFSFGLKEKKMGIRGSATAELIFENCR--IPKGNLLGGLGKGFK 233

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +  LD   + ++   + +AE     A+ Y + R   G  L      +  +AD+   + 
Sbjct: 234 IAMQTLDGGRIGIAAQALGIAEGALDEAVAYVKERRQFGRPLSKFQNTQFQLADMFARVD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L ++ A           ++A A++ A  T  +       V  +A++  GG GY  +
Sbjct: 294 AAKYLVYKAAWKKQNKLPYGVDSATAKLFAAETAMF-------VTTKAVQLFGGYGYTRD 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R++    I  G+
Sbjct: 347 YPVERMMRDAKITEIYEGT 365


>gi|262372427|ref|ZP_06065706.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262312452|gb|EEY93537.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 381

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 120/303 (39%), Gaps = 31/303 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           S  +A  +  + T    + W PK+ S E              A+G +G+TE   G+D+ A
Sbjct: 91  SEIAAPYIQHIGTEEQKQYWLPKMVSGE--------------AVGAIGMTEPGAGSDLQA 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +      D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G   
Sbjct: 137 MRTSAILQGDH-YILNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDTHLEGFKK 195

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--G 327
               +KIG  S  T EL F N       LLG  N  +G    M+ L    +AI S +   
Sbjct: 196 GTNLDKIGLHSQDTSELFFDNVKVPKDQLLG--NAGSGFAYLMQELPRERTAIASTALGA 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R ++  A  Y + R   G  +      +  +A   +D  A  A   +    + E K   
Sbjct: 254 IRGAIDLATAYVKERQAFGQAISQFQNTRFVLAQAKIDELATAAFYNQNVELYMEGKLDV 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E AA         K +   M   V    ++  GG GY+ E  I+R + ++    I  G+ 
Sbjct: 314 ETAA-------ALKSFSTDMQMKVSDNLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTN 366

Query: 448 NAM 450
             M
Sbjct: 367 EIM 369


>gi|238027287|ref|YP_002911518.1| putative acyl-CoA dehydrogenase-like protein [Burkholderia glumae
           BGR1]
 gi|237876481|gb|ACR28814.1| Probable acyl-CoA dehydrogenase-like protein [Burkholderia glumae
           BGR1]
          Length = 389

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 29/269 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF-IML 246
           P  +    IG L L+E   G+++AA+    ++ +DG Y + G K W  +  ++D   ++L
Sbjct: 121 PGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADG-YAVDGLKTWVSNGDIADHHAVLL 179

Query: 247 AQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
              EG  G  L    VP      +PNG+        +  R+ A++  E +     L  D 
Sbjct: 180 RTGEGPGGLGLSFLSVPAATAGVTPNGIAL------LAPRAFASLAFEQAA----LPADA 229

Query: 303 NVST---GPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            + T   G    M+IL IY  S   +  G  R +LA ++ +AR R V+GG L+ Q     
Sbjct: 230 LIGTAGMGFRYAMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTID 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++A    +   L  R A  FD     +E AA+A     ITK         V  +A++
Sbjct: 290 KIANMAAFADSTALLVARTAWEFD--TGVAEVAAHAS----ITKLVATDGLARVADDAVQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             G +G +        +R++ A  I  G+
Sbjct: 344 LFGAAGLVAGSPAESLFRQARALRIYEGT 372


>gi|126336530|ref|XP_001378544.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 629

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 35/320 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D   Y L+G K W  +  ++  F + A+ E         
Sbjct: 188 LTEATSGSDAASIQTRATLSEDKKFYILNGSKIWITNGSLASIFTVFAKTELFDSDGFKR 247

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R     +  G+   + +NK+G R + T E+ F NT      ++G+  V  G
Sbjct: 248 DKITAFIVER-----NFGGITNGKPENKLGIRGSDTCEVRFENTKVPIENVIGE--VGDG 300

Query: 308 PVEDMKILIYLDSAIMS-VSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M +L      + S V+GM   L      YA  R      L +  +++   A +A  
Sbjct: 301 FKIAMNVLNSGRFTMGSLVAGMLKKLIGMTAEYACTRKQFNRPLSEFGLIEEKFALLARK 360

Query: 366 IAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D       S EAA  ++ +     W C      ++EA++ +GG G
Sbjct: 361 TYVMESMAYLTAGMMDSPGVPDCSMEAAMVKVFSS-EASWIC------VSEALQIVGGLG 413

Query: 424 YIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           Y+++    R+ R+S    I  G+     M + +  L   G  L + L    + ++G++ +
Sbjct: 414 YMKDYPYERYLRDSRILQIFEGTNEVLRMYIALTGLQHAGKVLTKTLDDLRKGNVGNAME 473

Query: 482 KVITILRDSISLCKEDKGLA 501
            +   LR+S+   K D GL 
Sbjct: 474 HLSKKLRESVRR-KVDLGLT 492


>gi|218779917|ref|YP_002431235.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761301|gb|ACL03767.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 383

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 128/298 (42%), Gaps = 33/298 (11%)

Query: 165 MTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           M TP +++      F  EY       P     +   + +TE   G+D+AA+ +  +K  D
Sbjct: 97  MATPAIYE------FGSEYLKEKYLMPAIAGDMVSSIAVTEPDAGSDVAALKTYAKKEGD 150

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKN 277
             Y ++G K ++++   +D   +LA+     G      F+VP  L      G    +  +
Sbjct: 151 -YYIINGSKTYITNGTQADFLTLLARTSDDPGYHCYSLFVVPTDLP-----GFQISKKLD 204

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G RS+ T EL F N       L+G      G ++ M+   +    +   +  G+  ++
Sbjct: 205 KLGMRSSDTAELYFDNVKVPVENLIG--KEGEGFIQQMQQFQHERFTALPTAYVGVERAI 262

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y + R V G  L+ + V++  +A    +  +  AL++ +    +  +  + E + 
Sbjct: 263 KRTAEYLKGRIVFGKPLLSKQVLRHRLAQWMAEAESLRALTYHIVRLKEAGQDVTREISM 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +++A        ++   V    ++  GG G++ E  I+R+ R++   SI  G+   M
Sbjct: 323 GKLLA-------GQLMNKVADGCLQMHGGIGFMNEMWISRYMRDAKLISIGGGANEVM 373


>gi|110668312|ref|YP_658123.1| acyl-CoA dehydrogenase [Haloquadratum walsbyi DSM 16790]
 gi|109626059|emb|CAJ52509.1| acyl-CoA dehydrogenase [Haloquadratum walsbyi DSM 16790]
          Length = 384

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     GL ++E   G+D+A +T+  +K  D  + ++G K+++ + +   ++ L   
Sbjct: 116 PVAENEQITGLAVSEPDSGSDLAGMTTTAEKDGDE-WIVNGEKYWVGNAVEADWLTLYAK 174

Query: 250 EGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            G           F++P        +G   + +  K+  R++    +  +        L+
Sbjct: 175 TGDGDTRYDDYSLFILPT-----DASGYTVEHIPEKMAYRASKQGHITLNQCRIPDSHLI 229

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
           GD+       +  +I+  + +   + V+G  + LA     EA  +   R      + D  
Sbjct: 230 GDVG------DGFEIVTEFFNHGRVDVAGHGLGLAAAAIEEASQFVHNREAWDQQISDFQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +K  +A++ +++ +A AL++R A    E  +    AA A+  A      C +       
Sbjct: 284 AVKHDLAEMRMELESARALTWRAAKHVTENNNPGYWAALAKTTATEAAVNCAE------- 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            AM+  GG   ++E  I+R YR+     I  G+ N
Sbjct: 337 SAMQLYGGRSVLKENKISRIYRDVRVPVIYEGANN 371


>gi|308474991|ref|XP_003099715.1| CRE-ACDH-1 protein [Caenorhabditis remanei]
 gi|308266370|gb|EFP10323.1| CRE-ACDH-1 protein [Caenorhabditis remanei]
          Length = 432

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 27/216 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           ++E   G+D  A+ +  +K  D  + +SG K W  +S  +  F++ A  +       + C
Sbjct: 169 ISESGAGSDAFALKTAAKKDGDD-FLISGSKMWITNSGEAQVFVVFANADPSQKYKGITC 227

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V R  E     GL   R ++K+G R+++T ++ F N       +LG+        +  
Sbjct: 228 FIVERGAE-----GLTVDREEDKLGIRASSTCQVHFDNVRVHKSAILGEYG------KGY 276

Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K  I  L++  +++    + LA+      I Y ++R   G  LID   ++  IA +  +I
Sbjct: 277 KYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGKRLIDFQGLQHQIAQVRTEI 336

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            AA  L +  A   +       EAA A++ A    Y
Sbjct: 337 EAARLLVYNAARMKEYGIPYVREAAMAKLFASQVIY 372


>gi|282936150|gb|ADB04332.1| putative butyryl-CoA dehydrogenase [bacterium enrichment culture
           clone N47]
 gi|308274020|emb|CBX30619.1| Probable acyl-CoA dehydrogenase yngJ [uncultured Desulfobacterium
           sp.]
          Length = 385

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 45/279 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-- 247
           P  K        LTE   G+D  A+ ++  K  D  Y ++G K F+S+     F+ +A  
Sbjct: 116 PAIKGEKIAAFALTEADAGSDAIALRTRAVKDGDD-YIINGSKMFISNGTFCDFVPVACY 174

Query: 248 -----QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                +V+ R  G  L+  ++E G P G    +LK K GNRS+ T +L F         D
Sbjct: 175 TTDPKEVKKRGQGISLI--VVEKGMP-GFSATKLK-KSGNRSHETAQLYFE--------D 222

Query: 302 LNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
           + V   P E++         +IL  L S  +S       +A+A +     YA  R   G 
Sbjct: 223 VRV---PKENLIGEEGKGLAQILTTLKSGRISYGARATGMAQAAYDLAFKYAHEREQFGK 279

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +    + D+A+ I     +++R A  + +  +  +EA   +I       +  + 
Sbjct: 280 QIAKFQINTVKLVDMAMHIDIMRTMTYRAAWMYSQGMNCMKEACMLKI-------YATEK 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              ++  A++  GG GY+ E +I R +R++   ++  G+
Sbjct: 333 VQQLMLLALDLHGGYGYMREYAIERLWRDAKMLNLTEGT 371


>gi|254777206|ref|ZP_05218722.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 382

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 62/308 (20%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P + + E               +G+ +TE   G+D+A I +   +  D 
Sbjct: 105 LTTPEQQRRWLPGVVTGE-------------TVLGIAMTEPGTGSDLAGIRTTAVRDGDH 151

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  + D F++  +   +   G  L   L+ D    G    R   KIG 
Sbjct: 152 -YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKGLSL---LVVDADTPGFGRGRNLEKIGL 207

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSL 332
            +  T EL F+        D+ V   P E++         +++  L    +S++   V+ 
Sbjct: 208 HAQDTSELSFT--------DMRV---PAENLLEAEGRGFYQLMKNLPQERLSLAVGAVAA 256

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDE 382
           A     E + Y ++RH  G  +      +  +A++A +I  A       L+  LA     
Sbjct: 257 AEAVFAETLDYVKQRHAFGAPIAAFQNSQFVLAELATEIDVARTYLDDCLAAHLAGELTA 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A++       AR+     K+W   +        ++  GG GY+ E  +AR + ++   +I
Sbjct: 317 ARA-------ARL-----KWWTTDLQVRTADRCLQLHGGYGYMREYGVARAFVDARIQTI 364

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 365 YGGTNEIM 372


>gi|11498048|ref|NP_069272.1| acyl-CoA dehydrogenase (acd-2) [Archaeoglobus fulgidus DSM 4304]
 gi|2650189|gb|AAB90797.1| acyl-CoA dehydrogenase (acd-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 382

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 27/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVGCFL 257
           +  TE   G+D+A + ++  K  D  + ++G K F+++     F+++     EG      
Sbjct: 123 MATTEPEAGSDVANVKTKIVKEGDE-WVINGTKMFITNGTVCDFVLVLGRTYEGEKRHHG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + +    G    ++KNK+G R++ T E+   +     + + N+   P +    L+ 
Sbjct: 182 LTFAIVESKSKGFKATKIKNKLGLRASDTAEIVLKDV---KVPEENILGEPGKGFYYLME 238

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           + +     V+   V +A+     A++Y ++R   G  +      +  IA++A  I AA  
Sbjct: 239 FFNHTRPRVAAQAVGIAQGAFELALNYVKQRKQFGQPIAAFQHTQFKIAEMATRIQAARL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKY----WCCKMAPAVIAEAMECIGGSGYIEE 427
           L+++ A      +SR E ++ A+  A  T      WC ++            GG GYI E
Sbjct: 299 LTWQAAWQCSIGQSRPELSSMAKWFAGETAVYVADWCVQLH-----------GGYGYIGE 347

Query: 428 RSIARHYRESPANSILLGS 446
               R+YR++    I  G+
Sbjct: 348 YPAERYYRDAKLMEIYEGT 366


>gi|89894314|ref|YP_517801.1| hypothetical protein DSY1568 [Desulfitobacterium hafniense Y51]
 gi|89333762|dbj|BAE83357.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 386

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR-VGC 255
           LTE   G+D  A+  + +   D      G  +  +  ++  F         Q +G+ + C
Sbjct: 129 LTEPNAGSDAGALRCKAEDRGDHFLVNGGKIFITNGTVATTFCTFVKTDPTQPKGKGITC 188

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VSTGP 308
            L+ + L      G    +   K+G   + TVEL F N       +LG++N    V+ G 
Sbjct: 189 LLIEKDLP-----GFTISKPVEKMGMHGSPTVELIFENVKVPKENVLGEINNGFAVAMGL 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +   +I I          G+ ++   L   I+Y + R      L     ++  IAD+A  
Sbjct: 244 LAGGRITI-------GAQGLGIAEGALDYTINYIKERQQFDKPLAANQGVQFMIADMATK 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +R A   D     ++EA+ A++ A         +A  V    ++ +GG GY 
Sbjct: 297 IEAAQMLIYRAAWLKDHQLPHNKEASMAKLFA-------TDVAMEVTTNCVQLLGGYGYC 349

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++    I  GS
Sbjct: 350 SEYPVERMMRDAKITQIYEGS 370


>gi|332835216|ref|XP_001151318.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 423

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 27/254 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V+  +G   +  
Sbjct: 176 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 234

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            L D    GL   + +NK+G R+++T  L F N     + + N+        K  I  L+
Sbjct: 235 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIGHGYKYAIGSLN 291

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + LA+      I Y + R   G  L D   ++  +A +A  +     L  
Sbjct: 292 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQL----ELLQ 347

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+  S     SR +  A   +   I       +A    ++ +E +GG GY ++  + +++
Sbjct: 348 RIVGS-----SRVDLQASLLLDYSI-------IAGQTTSKCIEWMGGVGYTKDYPVEKYF 395

Query: 435 RESPANSILLGSGN 448
           R++   +I  G+ N
Sbjct: 396 RDAKIGTIYEGASN 409


>gi|307296036|ref|ZP_07575867.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878207|gb|EFN09429.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 386

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 55/304 (18%)

Query: 164 LMTTPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           LM      +D W P++ S E             V     LTE   G+D AA+ ++  +  
Sbjct: 98  LMDGTEEQRDYWLPRMASGE-------------VITSFCLTEPDSGSDSAALQTRAVRDG 144

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           D  Y L+G K F++ +P++  F+++A+           V  FLVP         G+   +
Sbjct: 145 DD-YILNGTKRFITNAPIAGLFLVMARTHPERLPKNAHVTAFLVP-----ADTPGVRLGK 198

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPVEDMKI---LIYLDSAIMSVSG 327
              K+G     + ++         L D+ V      G VE       +  LD   ++VS 
Sbjct: 199 KDRKMGQSGAWSSDV--------YLEDVRVPASAIVGGVEGKGFGTAMKSLDRGRINVSS 250

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +     R  L EA  YA  R   G  + +  +++  +AD   D+ AA  +   +A  +D 
Sbjct: 251 VCIGQARRILHEATKYAVERKQFGQPIGEFQLIQAMLADSRADLYAAECMLRDVARRYDS 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S EA+        TK +  +M   +   A++  GG+GY+ + ++ R YR+     I
Sbjct: 311 GERVSLEAS-------CTKMFASEMVGRIADRAVQIHGGAGYMRDSAVERFYRDVRVFRI 363

Query: 443 LLGS 446
             G+
Sbjct: 364 YEGT 367


>gi|302534520|ref|ZP_07286862.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443415|gb|EFL15231.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 386

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 50/315 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + W PK+ S E             V    GLTE   G+D     +   +  D
Sbjct: 102 LFGTEEQKQQWLPKLCSGE-------------VLGAFGLTEPGAGSDAGGTRTTAVRDGD 148

Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274
             + ++G K F+++  +D    + +  V GR       +   +VP     G+P G     
Sbjct: 149 -EWVINGSKCFITNSGTDITGLVTVTAVTGRKADGRPEISSIIVP----SGTP-GFTVAA 202

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +K+G  S+ T EL F +       L+G      G  + ++IL   D   ++++ +   
Sbjct: 203 PYSKVGWNSSDTRELSFDDVRVPLANLVG--QEGRGYAQFLRIL---DEGRIAIAALATG 257

Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA     E++ YA+ R   G  + D   ++  +AD+    A    + +R      +A SR
Sbjct: 258 LAQGCVDESVKYAKERQAFGKPIGDNQAIQFKLADMETR-AHMARIGWR------DAASR 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  +  A I K +   +A     +A +  GG G++ E  +AR +R+S    + +G 
Sbjct: 311 LVHGEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGE 368

Query: 447 GNAMVLDVLNLLEKG 461
           G + V  +L   E G
Sbjct: 369 GTSEVQRMLIARELG 383


>gi|255263522|ref|ZP_05342864.1| glutaryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
 gi|255105857|gb|EET48531.1| glutaryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
          Length = 407

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K   G Y L+G K W  +SP++D F++ A+ E   G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTIARKTDTG-YVLNGSKMWISNSPIADVFVIWAKSEAHGGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+   +       LL ++    GP    
Sbjct: 208 FVLEKGMD-----GLSAPKIGGKLSLRASITGEIVMQDVAVGEDALLPNVQGLKGPFG-- 260

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A+ Y   R      +    + +  +A++  +I 
Sbjct: 261 ----CLNRARYGISWGVMGAAEFCWHAALQYGLDRKQFDKPIAQTQLFQLKLANMQTEIT 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DEA +  E       M  + K   C  A  +   A +  GG+G  E+
Sbjct: 317 LGLQGSLRVGRLMDEANAAPE-------MISLMKRNNCGKALEIARHARDMHGGNGISED 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVMRH 375


>gi|196014203|ref|XP_002116961.1| hypothetical protein TRIADDRAFT_31731 [Trichoplax adhaerens]
 gi|190580452|gb|EDV20535.1| hypothetical protein TRIADDRAFT_31731 [Trichoplax adhaerens]
          Length = 575

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 42/278 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
             LTE   G+D AA+ ++    +DG  Y L+G+K W  +  ++    + A+VE R     
Sbjct: 148 FALTEPTAGSDAAALRTKAVLDNDGKHYILNGNKLWTTNGGIAGIITVFARVERRKEDPE 207

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
                +   ++E   P G+     + K+G RS  T  L F N              PVE+
Sbjct: 208 DTAEGITAFIIEKDFP-GVSNGPPEKKMGLRSCNTAALYFDNV-----------KVPVEN 255

Query: 312 M--KILIYLDSAIMSVS----GMRVSLAEAIHYARRR---HVSGGILIDQPVM-----KR 357
           +  K+      A+  V+    G+  SL        RR   HV+  +  +Q ++     + 
Sbjct: 256 VIGKVGEGFKIALSIVNTGRFGINASLVGTTRELVRRASDHVNTRVQFNQKLIEFQAIQE 315

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +A +A+   A  +++  L N+ D   +  + E A ++I      ++C       I E +
Sbjct: 316 KLAKMAMFHYAIESITLFLCNNMDGGITDIQLETAMSKIFTTEAAWYC-------IDECI 368

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + +GG+GY+ +  I RH R++    I  G+ + + L V
Sbjct: 369 QVLGGNGYMRDNDIERHLRDARVFRIFEGANDTLRLFV 406


>gi|326383652|ref|ZP_08205338.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197736|gb|EGD54924.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 373

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 28/277 (10%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     M +  +   + LTE  GG+D+ A+ +    +  G + + G K ++S+    
Sbjct: 97  EYLPA----MAEGRIRATMALTEPSGGSDLQAMRTHADPVEGG-FAIKGSKTWISNAAHS 151

Query: 242 AFIMLAQVEGRV------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
               L  V  R       G  ++  L+E G  +G    +   K+G R     EL F +  
Sbjct: 152 GLFGLLCVTDRAADPAHKGMSVI--LVEPG--DGFTVSKKLPKLGYRGVEACELVFDDMG 207

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L G+ N   G +     +  +  A  ++   + SL  A  Y++ R   G  +  
Sbjct: 208 VPADAVLGGEPNKGWGHMMRGLEVGRIQVAARALGVGQASLEAATRYSQERESFGRPIWK 267

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   IAD+A    AA  L+   A   D  +    EA  A++ A  T       A  +
Sbjct: 268 HQSVGNLIADMATKQQAARLLTVDAAQKLDRGERADLEAGMAKLFASET-------AMQL 320

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             +++   GG GY +E  + R++R++P   +++G G 
Sbjct: 321 ALDSIRVHGGYGYSKEYDVERYFRDAPL--MIVGEGT 355


>gi|296389575|ref|ZP_06879050.1| isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++ D  + L+G K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRVGD-RFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 187 TAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDV---EVPEENVLGAVNGGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  V + +A     + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAAACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|289616015|emb|CBI57114.1| unnamed protein product [Sordaria macrospora]
          Length = 413

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 36/291 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  +   ++Y      P   T+      L+E   G+D  A+ ++  +   G Y ++G K 
Sbjct: 151 WGSEALKKKY-----LPKLATNTVGSFCLSEPVSGSDAFALATRAVETEHG-YKINGSKM 204

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +S  +D FI+ A ++   G   +   + +    G    + + K+G R+++T  L F 
Sbjct: 205 WITNSMEADFFIVFANIDPSKGYRGITAFIVEKGMKGFSIAKKEKKLGIRASSTCVLNFD 264

Query: 293 NTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                   D+ V   P E++  K+      AI  ++  R+ +      A+   ++ G   
Sbjct: 265 --------DVEV---PKENLLGKVGEGYKYAIGILNEGRIGIG-----AQMTGLALGAW- 307

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAP 409
            +  +   IA    +IAAA AL +  A        R +EA    +M A + K +  ++A 
Sbjct: 308 -ENAVNDQIAQSYTEIAAARALVYNAA--------RKKEAGEDFVMDAAMAKLYASQVAG 358

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 359 RVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKTLQK 409


>gi|229191183|ref|ZP_04318172.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           10876]
 gi|228592333|gb|EEK50163.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           10876]
          Length = 382

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P ++R + ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|254515690|ref|ZP_05127750.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219675412|gb|EED31778.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 411

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 20/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D   + ++ + + DG Y +SG K W  +SP++D F++ A
Sbjct: 145 PKLATGEWIGCFGLTEPDYGSDPGGMVTRARSV-DGGYRISGAKMWISNSPVADVFVVWA 203

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + +  V   +   +LE G   GL   +++ K+  R++ T E+     F     LL ++  
Sbjct: 204 KTDDDV---IRGFVLEKGM-EGLSAPKIEGKLALRASITGEIVMDEVFVSEEQLLPNVQG 259

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             GP         L++A   ++   +  AEA  +A   +       D+P+    +  + L
Sbjct: 260 LKGP------FGCLNNARYGIAWGALGAAEACWHAALNYTLERKQFDRPLAANQLVQLKL 313

Query: 365 -DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D+    AL  +       A    +  A A  +  + K   C  A  V  +A + +GG+G
Sbjct: 314 ADMQTEIALGLQ---GCARAGQLMDAGAIAPDLISLIKRNSCGKALHVARQARDMLGGNG 370

Query: 424 YIEERSIARH 433
             +E  + RH
Sbjct: 371 ISDEYPVMRH 380


>gi|218290105|ref|ZP_03494267.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239814|gb|EED07003.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 584

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 50/292 (17%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D +   TS  +  + G Y LSG K W  ++ ++  +++ AQ+  R V  F+V
Sbjct: 144 LTEPDAGSDALHGKTSARRDEARGCYVLSGQKQWISNARVAGVYVVFAQLADRGVTAFVV 203

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVEDMK 313
            R        G+   + ++K+G  ++ T  L        +L D+ V        P    +
Sbjct: 204 DR-----DRQGVSVGKEEHKVGIHASPTASL--------ILDDVEVPESALLGAPGHGHR 250

Query: 314 ILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I + +        A+ ++   R ++  A  YA+ R   G  +    +++  +  +A    
Sbjct: 251 IALSVLNLARHKMALYALGQARRAIRIAAKYAKERRQFGVPIASFGMIREKLGYMAARYF 310

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAP-------------------ITKYWCCKMA 408
            A + ++R A      K R+ + A    + P                   + K    ++ 
Sbjct: 311 VARSAAYRAAGELAPGKKRALDLALRSDLEPEEKVRGVASALSSCIAACSLNKVLATEVQ 370

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN----AMVLDVLN 456
             +I EA++  GG GY+E+  IAR YR++    I  G+      A V D+L+
Sbjct: 371 AFIIDEAVQIHGGYGYMEDYEIARMYRDARITRIFEGTNEINRLAAVRDLLH 422


>gi|126662336|ref|ZP_01733335.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteria bacterium BAL38]
 gi|126625715|gb|EAZ96404.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteria bacterium BAL38]
          Length = 379

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 42/276 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K  V     L+E   G+D  +  +    + D  Y ++G K W  +   +  ++++AQ
Sbjct: 113 PLAKGDVIGAFCLSEPEAGSDATSQRTTAIDMGDH-YLVNGTKNWITNGGTASTYLVIAQ 171

Query: 249 VEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +   G   +  L +E G P G      + K+G R         S+T   L  D+ V   
Sbjct: 172 TDASKGHKGINVLIMEKGMP-GFEVGPKEKKMGIRG--------SDTHTLLFNDVKV--- 219

Query: 308 PVEDMKILIYLDS-----AIMSVSGMRVSLAE------------AIHYARRRHVSGGILI 350
           P E+    I  D      A+ +++G R+ +A             A+ Y++ R   G  + 
Sbjct: 220 PKENR---IGEDGFGFAFAMSTLNGGRIGIASQALGIAQGAYELALKYSQERVAFGKPIF 276

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   +   +AD+ + I  A  L  + A      K   E+ A++  MA   K +  ++A  
Sbjct: 277 NHQAIAFKLADMHVKITCARLLIHKAATE----KDNGEDIAHSGAMA---KLYASEIALE 329

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  EA++  GG+GY+ E  + R  R+S    I  G+
Sbjct: 330 VANEAVQIHGGNGYVSEYHVERMMRDSKITQIYEGT 365


>gi|313885678|ref|ZP_07819427.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619043|gb|EFR30483.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 367

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 29/255 (11%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCF 256
           +E+ GG+DI  +T+   + ++G + L+GHK ++S+        +   +       + G F
Sbjct: 118 SEEAGGSDIEQLTTTVVE-TEGGWILNGHKAYVSNGQEAHLFYVTAKKADANHSLQRGVF 176

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +V R LE     G+     K K+G R+ +  EL F N F     LLG   V  G  +  +
Sbjct: 177 VVNRDLE-----GVTVHPAKKKVGIRAMSVTELTFENVFLSEESLLG--GVYQGETQSKE 229

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I+  I L     ++     S+ + I Y       G  LI+ P  ++ IA +     A  A
Sbjct: 230 IMDRIKLSIVAQAIGLTASSIKKGIDYLSLDRKIGTRLIEMPDYQQIIAHLISRYEAIQA 289

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L       +D   S   +    R    + K    ++A     + +   GG G++ +  + 
Sbjct: 290 L-------YDNTVS---QRTIDRDAIAMLKLLTSELATQSTEQIIHMSGGFGFMRQNDLE 339

Query: 432 RHYRESPANSILLGS 446
           R  R++ A +I  GS
Sbjct: 340 RLARDARATAIYGGS 354


>gi|312141462|ref|YP_004008798.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890801|emb|CBH50120.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 404

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 46/271 (16%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
            P+ +  V     +TE     G+D +A+T++ +K   G + ++GHKWF++ +  +  FI+
Sbjct: 121 GPLARGEVRSAFAMTEPAPGAGSDPSALTTRAEKAPGG-WKINGHKWFITGADGAGFFIV 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV----ELEFSNTF 295
           +A+  G  G       FL P      S  G+   R+   I     A +    E+ F + F
Sbjct: 180 MARTSGAPGDRGGATMFLAP-----ASAPGI---RVGRHIDTLDRAMIGGHCEVFFEDLF 231

Query: 296 ---GFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                +LG ++       V  GP     ++ +L +A       R     A+ Y  RR   
Sbjct: 232 VPDDAVLGAVDEGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVDYVARRDGF 284

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L D  ++++ +AD  +DIAA  AL  R     D+  + S+  +       I K +  
Sbjct: 285 GSRLGDLGMVQQMVADNEIDIAATRALLTRACWELDQGGTASDSTS-------IAKTFGA 337

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    ++  +++  GG G   +  +AR  RE
Sbjct: 338 EAIFRIVDRSIQMCGGMGVSGDLPLARLSRE 368


>gi|253582140|ref|ZP_04859364.1| acyl-CoA dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251836489|gb|EES65026.1| acyl-CoA dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 381

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 51/329 (15%)

Query: 140 LYLMAQLEAGHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +Y MA  E   +   + V  ++  +L T P +H       F  E       P   +   +
Sbjct: 68  MYAMAVEELSRVCGTTGVIVSAHTSLGTWPILH-------FGTEEQKQKYIPKLASGEWL 120

Query: 199 G-LGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV 253
           G  GLTE   GTD A    Q   + D     + ++G K F+++   +D +++    +   
Sbjct: 121 GAFGLTEPNAGTDAAG--QQTTAVLDEATNEWVINGSKIFITNAGYADVYVIFGMTDRSK 178

Query: 254 GCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           G   +   +LE G+P G    + + K+G + ++T EL F N       LLG++       
Sbjct: 179 GLKGISAFILEAGTP-GFSIGKKEKKLGIKGSSTCELIFENVRIPKSNLLGEVG------ 231

Query: 310 EDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKR 357
           +  KI      A+M++ G R+ +A            E + Y + R   G  +      + 
Sbjct: 232 KGFKI------AMMTLDGGRIGIASQALGIAQGALDETVGYVKERKQFGRAIAKFQNTQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ + I A+  L ++ A         + +AA A++ A        + A  V  +A++
Sbjct: 286 QLADLEVKIEASRLLVYKAAWRESNNLPYTVDAARAKLFA-------AETAMEVTTKAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG GY  E  + R  R++    I  G+
Sbjct: 339 LHGGYGYTREYPVERMMRDAKITEIYEGT 367


>gi|229133981|ref|ZP_04262802.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST196]
 gi|228649474|gb|EEL05488.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           BDRD-ST196]
          Length = 382

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 110/237 (46%), Gaps = 25/237 (10%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G+K     + ++G K F + +P+ D FI+ A +EG+  +G F++P+  
Sbjct: 136 RGGKPETLAVKKGEK-----WIINGRKTFTTMAPVLDYFIISASIEGQEDIGEFVIPK-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDS 320
              +  G+  +   + I  R  A+ +L   N         D+  S    + +  L+++ +
Sbjct: 189 ---NTQGVTIEETWDSIAMRGTASHDLVLQNVEIPDRFFTDIKGSKVKAKGIGWLLHIPA 245

Query: 321 AIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             + +  S    ++  A+ Y +   ++  I +  P ++R + ++ L++  A    +++A 
Sbjct: 246 CYLGIAQSARNYAVQFAVSY-KPNSLNHSISL-LPNVRRLVGELELELMQARVFLYQIAK 303

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +DEA+ + S +A  A       KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 304 KYDEAEDKLSLQAELA-----AAKYVVTNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|91079744|ref|XP_970506.1| PREDICTED: similar to CG12262 CG12262-PA [Tribolium castaneum]
 gi|270003324|gb|EEZ99771.1| hypothetical protein TcasGA2_TC002547 [Tribolium castaneum]
          Length = 419

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D++ I ++ +K  D  + ++G K W  +  +++ + +LA+      C     
Sbjct: 156 VTEPGAGSDVSGIKTRAEKKGD-EWIINGQKMWITNGGVANWYFVLARTNPDPKCPAGKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERETP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLVGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     +   +AD+A+ +  + 
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCLDEALKYANERKTFGVPIAHHQAVAFMLADMAVGVETSR 330

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               + A   D+ +  S EAA       I K +   +A     +A++  GG+G+  E  +
Sbjct: 331 LAWMKSAWRVDQGQRNSYEAA-------IAKCYAADVANKCATDAVQIFGGNGFNSEYPV 383

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 384 EKLMRDAKIYQIYEGT 399


>gi|134298441|ref|YP_001111937.1| crotonobetainyl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134051141|gb|ABO49112.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 377

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 13/254 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +   +  DG   L+GHK F++S     ++++   +           
Sbjct: 123 ITEPGAGSDVGSLQTTYTR-KDGKVYLNGHKCFITSGAGVPYLVVMAKDSENSKIFTEWF 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           ++   P G+  ++L  K+G R ++  E+ F N                + +K     +  
Sbjct: 182 VDMTKP-GIKIEKLP-KLGLRMDSCCEIYFDNVELEEKDMFGKEGNGFQRVKEEFDFERF 239

Query: 322 IMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++  +    +L    +A  YA +R   G  +    +++   A +A+ +     + +  A 
Sbjct: 240 LVGCTNYGTALCAFEDAAKYANQREQFGEKIGRYQLIQEKFAHMAIKLTNMRNMLYEAAW 299

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D     S EAA       + KY+C   A  V+ +AM+ +GG G   +  I+R +R+  
Sbjct: 300 KYDNGIMGSGEAA-------MCKYYCANAAFEVVDQAMQVLGGYGIAGDHRISRFWRDLR 352

Query: 439 ANSILLGSGNAMVL 452
            + +  G+    +L
Sbjct: 353 VDRVSGGTDEMQIL 366


>gi|115524260|ref|YP_781171.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518207|gb|ABJ06191.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 141/381 (37%), Gaps = 52/381 (13%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+K +  PA H L ++    G             V      +  +   +MA+ E 
Sbjct: 24  PHVDEWEKAQIFPA-HELFKKLGELGF------LGLNKPVEYGGQGLDYSYALMMAE-EL 75

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +    V  A  V   M TP + + +      RE+     AP         +G++E   
Sbjct: 76  GAINCGGVPMAIGVQTDMATPALAR-FGSDELRREF----LAPSIAGDFVACIGVSEPSA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLL 262
           G+D+A+I +      D      G  W  +   +D   +LA   EG          VP   
Sbjct: 131 GSDVASIKTNAVGDGDDYVINGGKMWITNGTQADWICLLANTGEGPKHRNKSLICVPM-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310
                 G+   R  +K+G  S+ T ++ F N             FGF+   +        
Sbjct: 189 ---KTKGVTIARKLDKLGMHSSDTAQIFFDNVRVPKRNRIGEEGFGFMYQMVQFQEE--- 242

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +     ++   I Y R R   G  L+D  V+   +A++  ++    
Sbjct: 243 ------RLWGAAACLKAHERTIQNTIDYTRERKAFGQSLLDNQVVHFRLAELQTEVELLR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L +R A +    +  ++ A  A++ A        ++   +    ++  GG G++ E  +
Sbjct: 297 SLVYRAAEALVAGQDVTQLATMAKLRA-------GRLGRELPDACLQFWGGMGFMNETLV 349

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR+S   SI  G+   M+
Sbjct: 350 SRAYRDSRLTSIGGGADEVML 370


>gi|119718648|ref|YP_925613.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539309|gb|ABL83926.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 621

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 58/298 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFI--MLAQ---VEGRVG 254
           LTE   G+D+ A  ++     DG + + G K F++S   +SD  I  +LA+   VEG  G
Sbjct: 164 LTEPDAGSDVGAGRTKATPNDDGTWNIEGVKRFITSAEGVSDQVIHMVLARPVGVEGAGG 223

Query: 255 -------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN-------- 293
                   F+VP+   D      G  NG     +++K+G + + T EL F +        
Sbjct: 224 PGTKGLSLFIVPKYHFDLETGELGERNGAYVTNVEHKMGIKVSNTCELTFGDPGVGGGEP 283

Query: 294 TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
             G+LLG+++         +E+ ++++       +++ +      A+ +A+ R V G  L
Sbjct: 284 AVGYLLGEVHNGIAQMFQVIENARMMV----GTKAIATLSTGYLNALEFAKER-VQGADL 338

Query: 350 ID-------------QPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYA 393
                           P ++R++        A  AL    A+  D    A+   E    A
Sbjct: 339 AQSADKTAPRVTITHHPDVRRSLMTQKSFAEAMRALVLYTASWQDRVMIAEHNGERDELA 398

Query: 394 R----IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                ++ PI K +  + +  ++  E+++ +GGSG+++E  I ++ R++  +++  G+
Sbjct: 399 EKVNDLLLPIVKGYGSERSWVLLGTESLQTLGGSGFLQEYPIEQYVRDAKIDTLYEGT 456


>gi|309781996|ref|ZP_07676726.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308919062|gb|EFP64729.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 622

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 127/318 (39%), Gaps = 67/318 (21%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+   +       ++LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKLIPGVKGISLFIVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                     +   G+L+G+    L      + + +I + + + ++  +G       A+ 
Sbjct: 284 RPKGADGQPRAGAIGYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGY----LHAVD 339

Query: 338 YARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YAR R     +             ++D   ++R +      +  A  L+   A   DE +
Sbjct: 340 YARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEER 399

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ A  A+      I+ PI K W  +      + A++  GG GY  E ++ + YR++ 
Sbjct: 400 GETDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNR 459

Query: 439 ANSILLGSGNAMVLDVLN 456
            N I  G+     LD+L 
Sbjct: 460 LNPIHEGTHGIQGLDLLG 477


>gi|149378048|ref|ZP_01895771.1| acyl-CoA dehydrogenase, C-terminal domain [Marinobacter algicola
           DG893]
 gi|149357658|gb|EDM46157.1| acyl-CoA dehydrogenase, C-terminal domain [Marinobacter algicola
           DG893]
          Length = 440

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 30/229 (13%)

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  ++    +D  ++ A++ GR   F+V    E G+       +    +G R++
Sbjct: 229 YTLNGLKSSVALGASADLLLIAAELHGRPRLFIV----EAGATG--IQTKPDPGMGLRAS 282

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----I 336
           A V+L   N   +   LLGD        +D     +LD   +   G+ +  ++A     I
Sbjct: 283 APVQLRLDNVELSSDALLGD--------DDFDYQAFLDCGSLLRCGLSIGTSQAVLDYVI 334

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +  +  +   I+++A++  +   L++R A+  ++  S   E + AR++
Sbjct: 335 PYCNEREAFGEPISHRQSVAFMISNLAIETDSMRMLTWRAASRLEQGLSTHRETSLARLL 394

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  C + A  +    ++ +GG G+++E  + R YR+  + S L G
Sbjct: 395 -------CNEKAMEIGTNGVQLLGGHGFVKEHPVERWYRDLRSVSTLSG 436


>gi|332520065|ref|ZP_08396529.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044624|gb|EGI80818.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 392

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   + +  + + D  Y L+G K W  ++P  +  ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPGGMVTNFKDMGDH-YLLNGAKMWISNAPFCNVAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       LL + +    P      
Sbjct: 195 VERGME-----GFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAP------ 243

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A
Sbjct: 244 LGCLDSARFGIAWGAIGAAMDCYDTALRYSKERMQFGKPIGQFQLQQKKLAEMITEITKA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++RL    +   + S + + A       K    +MA  +  EA + +GG G   E S
Sbjct: 304 QLLAWRLGVMRENGTATSAQISMA-------KRNNVEMAINIAREARQMLGGMGISGEYS 356

Query: 430 IARH 433
           I RH
Sbjct: 357 IMRH 360


>gi|319950963|ref|ZP_08024835.1| acyl-CoA dehydrogenase FadE19 [Dietzia cinnamea P4]
 gi|319435385|gb|EFV90633.1| acyl-CoA dehydrogenase FadE19 [Dietzia cinnamea P4]
          Length = 381

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 75/301 (24%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
           G GLTE   G+D  A  +  ++  D  + ++G+K F+++  +D  + + +  V G     
Sbjct: 121 GFGLTEPGAGSDAGATKTTAKRDGD-EWVINGNKQFITNSGTDITSLVTVTAVTGTRDNG 179

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +   +VP     G+P G   +   +K+G  S+ T  L F+        D  V   PV
Sbjct: 180 KKAISTIIVPA----GTP-GFTAEPAYDKVGWNSSDTHPLTFA--------DARV---PV 223

Query: 310 EDM---------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVM 355
           E++           L  LD   ++++ +        + E++ YAR R            M
Sbjct: 224 ENLLGEEGRGYANFLSILDEGRIAIAAVATGAAQGCVDESVKYARERES----------M 273

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIM---------APITKYW 403
            R I +         A+SF++A    EA++ +   AY   AR+M         A I K  
Sbjct: 274 GRKIGEF-------QAISFKIARM--EARAHTARCAYHDAARLMLAGKPFKKEAAIAKMV 324

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A     +A +  GG G++ E ++ARHYR+S    + +G G   V   L L+ +G  
Sbjct: 325 ASEAAMDNARDATQIHGGYGFMNEYTVARHYRDS--KILEIGEGTTEVQ--LMLIARGLG 380

Query: 464 L 464
           L
Sbjct: 381 L 381


>gi|302517911|ref|ZP_07270253.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302426806|gb|EFK98621.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 390

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           L+E   G+D AA++++  +   G + LSG K W     +SD   +LA+  G     V  +
Sbjct: 133 LSEPTAGSDAAALSTKAVR-DGGDWVLSGTKAWITHGGVSDFCTVLARSGGPGAKGVTAY 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP         GL     + K+G + + T +L F    G  +GD        E   + L
Sbjct: 192 LVP-----ADAPGLSAAPPERKMGLKGSPTAQLHFD---GVRVGDERRIGAEGEGFSLAL 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   V LA+A   A       R   G  + D   ++  +AD+A  + A  
Sbjct: 244 DALDAGRLGIAACAVGLAQAALDAALDWAAERRQFGRAIGDFQGLRFLLADMATAVEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     + +AA A+++       C   A  V  +A++  GG GY  +  +
Sbjct: 304 ALYLAAARRKDAGLPYARQAAMAKLL-------CTDNAMKVTTDAVQVFGGYGYTTDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYLREAKVLQIVEGT 372


>gi|225712290|gb|ACO11991.1| Long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Lepeophtheirus salmonis]
          Length = 413

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 40/280 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           PM    +   LG+TE   G+D+  I +  +   D  + L+G K F+++ + +D  I++A 
Sbjct: 144 PMVAGELIGALGMTEPGAGSDLQGIRTSAKADGDD-FILNGSKVFITNGIVADLCIVVAV 202

Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF---G 296
            +         +  FLVP      +P    Y +  N  KIG  +  T EL F +      
Sbjct: 203 TDPNARSKAHGLSLFLVP----SDAPG---YSKGCNLKKIGCHNQDTAELFFEDVRLPKS 255

Query: 297 FLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            LLG  N      +   P E + I      A+++ +       E   Y  +R   G  L 
Sbjct: 256 ALLGKFNGGFYHLMEELPQERLGI------AVIAAAHAEWMYEETKDYINQRQAFGKSLS 309

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             P ++  +A++   IA   A         DE     E     + MA + KY    +   
Sbjct: 310 HLPTVRFKMAELKTKIAVMRAF-------VDECLIMHEHKKCNQEMASMAKYAATDLENE 362

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           V  E ++  GG GY+ E  IAR + +S    I  GS   M
Sbjct: 363 VATECVQLHGGWGYMYETPIARAFIDSRVQPIYGGSNEIM 402


>gi|254389511|ref|ZP_05004738.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294815887|ref|ZP_06774530.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326444228|ref|ZP_08218962.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197703225|gb|EDY49037.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294328486|gb|EFG10129.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 401

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 35/303 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           +RE   T    M    V     ++E   G+D++AITS+  +   G + L+G K +L++  
Sbjct: 107 TREQRETFLPRMALGEVRGAFSMSEPGLGSDVSAITSRAVR-DGGDHLLTGQKMWLTNGG 165

Query: 240 SDAFI--MLAQVEGR---------VGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATV 287
           +   +  ++   EG          +  FLV +    G    GL       K+G +   T 
Sbjct: 166 TSTLVAVLVRSDEGHPEGTPPHRSMTTFLVEKEPGFGEVRPGLTIPGKIEKMGYKGVDTT 225

Query: 288 ELEFSNTFGFLLGD---LNVSTG----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           EL      G  + D   L  +TG     + D   +  ++ A       R +    + YA+
Sbjct: 226 ELIMD---GLRIPDDRVLGGATGRGFYQMMDGVEVGRVNVAARGCGVARRAFELGVSYAQ 282

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +RH  G  + +   ++  +A++A  + AA A+    A   D  +    EA  A       
Sbjct: 283 QRHTFGRPIAEHQAVQFRLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMA------- 335

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NL 457
           KY   +    V+ ++    GG G+ +E  I R YRE+P   +L+G G A +  ++    L
Sbjct: 336 KYLAAEYCKEVVEDSFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRL 393

Query: 458 LEK 460
           LE+
Sbjct: 394 LEE 396


>gi|118466732|ref|YP_883172.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254776442|ref|ZP_05217958.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118168019|gb|ABK68916.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 401

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L + +GR  +
Sbjct: 131 MAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSKGRPAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL+ K+G + + T  + F N       LLG+  +  G   
Sbjct: 190 KSFIVPR-----DHPGVTVERLEKKLGIKGSDTAAIRFDNVRIPKENLLGNPEIEEGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQP--VMKRAIAD---I 362
              ++   D+    V+ M V +A A +   R+     G+ I  D+P  V   A A+   +
Sbjct: 245 S-GVMETFDNTRPIVAAMAVGVARAALEEIRKILTDAGVEISYDKPAHVQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  +A  LS R A   D     S+EA+       ++K    +MA  V  + +E  G +
Sbjct: 304 EADWESAYLLSLRAAWQADNKIPNSKEAS-------MSKAKAGRMATDVTLKTVELAGTA 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQSLLEKWARDSKILDIFEGT 380


>gi|226946952|ref|YP_002802025.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226721879|gb|ACO81050.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 393

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 36/310 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP   + + PK+ S E+              +G L ++E   G+D+ ++  +  +  D  
Sbjct: 109 TPAQKERFLPKLISGEH--------------VGALAMSEPNAGSDVVSMQLRADRKGD-R 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  + P  D  ++ A+ +   G   +   +LE  +P     Q+L +K+G R 
Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYAKTDPAAGARGISAFVLEKDTPGFSVAQKL-DKLGMRG 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IH 337
           + T EL F +     +   N+     E +++L+  LD     ++G  + L +A     + 
Sbjct: 213 SHTGELVFRDV---EIPAENLLGREGEGVRVLMSGLDYERAVLAGGPLGLMQAAMDVVVP 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  + +  +++  +AD+   + A  A  + +    D A          +  A
Sbjct: 270 YIHERRQFGQAIGEFQLIQAKVADMYTTLQACRAYLYAVGRQLD-ALGAGHVRQVRKDCA 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +  Y C + A  +  EA++ +GG+GYI +    R +R++    I  G+G + +  +L  
Sbjct: 329 GVILY-CAEKATWLAGEAIQILGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML-- 383

Query: 458 LEKGTNLFEQ 467
              G  LF++
Sbjct: 384 --IGRELFDE 391


>gi|330808605|ref|YP_004353067.1| isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376713|gb|AEA68063.1| Putative isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 113/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGDK-YVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGALNGGVKV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG    + +A     + Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + +  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACERGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|312961758|ref|ZP_07776256.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311284017|gb|EFQ62600.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F       +N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVEVPEANILGALNGGVKV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG    + +A     + Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + +  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACERGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|311248913|ref|XP_003123376.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 474

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 52/297 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y L+G K W  +SP++D F++ A+ E      +
Sbjct: 177 FGLTEPNHGSDPGSMETRARHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNC---I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPKIEGKFSLRASATGMIIMDDVEVPEEN----VLPKASSLAGP-- 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   +S   +  AE  +H AR+    R   G  L    +++R +AD+  +
Sbjct: 287 ----FGCLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTE 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K   E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 343 ITLGLHACLQLGRLKDQDKVTPE-------MVSLLKRNNCGKALDIARQARDMLGGNGIS 395

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           +E  + RH               AM L+ +N  E G  +  + F+  E  LG  G +
Sbjct: 396 DEYHVIRH---------------AMNLEAVNTYEGGAQVSGRGFA--ETSLGKRGAR 435


>gi|149201321|ref|ZP_01878296.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149145654|gb|EDM33680.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 381

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 111/290 (38%), Gaps = 37/290 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG 230
           + W PK+ S E             +   L +TE   G+D+  I ++   I DG  Y L+G
Sbjct: 110 QKWLPKMVSGE-------------MVGALAMTEPGAGSDVQGIKTRA--IRDGNAYRLTG 154

Query: 231 HKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++      I++A      EG  G  LV  ++E     G    R   K+G  +  T
Sbjct: 155 QKTFITNGQHAELIIVAAKTDPKEGAKGISLV--VVETEGAQGFARGRNLEKVGMHAGDT 212

Query: 287 VELEFSNTF----GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
            EL F N        L G+     G  + M+ L    L  A  +   M  ++   I Y +
Sbjct: 213 SELFFDNVEIPPENILGGE--EGRGFYQMMQQLPQERLIIACGAQGAMEGAVERTITYCK 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG ++     +  +A+     A   A                E+AA A       
Sbjct: 271 EREAFGGPILQFQNTRFKLAECQTKTAVCRAFLDSCITEHMRGDLSVEKAAMA------- 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           KYW       V+ E ++  GG GY++E  IA  + ++    I  G+   M
Sbjct: 324 KYWLTDTQGEVLDECLQLHGGYGYMQEYDIAEMWADARVQRIYGGTNEIM 373


>gi|57524955|ref|NP_001006136.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Gallus
           gallus]
 gi|53133792|emb|CAG32225.1| hypothetical protein RCJMB04_20f2 [Gallus gallus]
          Length = 614

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 139/314 (44%), Gaps = 44/314 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLA---------QVE 250
           LTE   G+D A+I ++     DG Y  L+G K W  +  ++  F + A         QV+
Sbjct: 172 LTEPGSGSDAASIQTRATLSEDGKYFLLNGSKVWISNGGLASIFTVFARTEIIEKDGQVK 231

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E++F NT        G + G   
Sbjct: 232 DKITAFIVERDF-----GGVTSGKPEDKLGIRGSNTCEVDFENTKVPIENVLGQIGGGFK 286

Query: 304 VSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE--AIHYARRRHVSGGILIDQPVMKRAIA 360
           V+      M IL     ++ S S GM   L E  A H   R+  +   L +  +++    
Sbjct: 287 VA------MNILNSGRFSMGSASAGMIKKLIEMTAEHACTRKQFNKK-LSEFGLIQEKFC 339

Query: 361 DIALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +A+      ++++  A   D       S EAA  ++ +     W C      ++EA++ 
Sbjct: 340 FMAVKAYVMESMAYLTAGMMDRPGFPDCSVEAAMVKVFSS-EGAWAC------VSEALQI 392

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +GG GY+++    R+ R+S    I  G+     M + +  +   G  L +++    + ++
Sbjct: 393 LGGLGYMKDYPYERYLRDSRILLIFEGTNEILRMYIALTGMQHAGKILTDKIKEIKKGNV 452

Query: 477 GSSGKKVITILRDS 490
           G + ++++  +RD+
Sbjct: 453 GLALQELVNKVRDT 466


>gi|228919813|ref|ZP_04083171.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839829|gb|EEM85112.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 388

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 130/267 (48%), Gaps = 21/267 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGRVGCF 256
           +TE  GG+D+A I + G+  ++ I  L+G K  +++ P++D  +++ ++    +  +  F
Sbjct: 124 ITESTGGSDVARIRTAGEYDANQI-ILNGKKSHITNAPIADIVVLVGRIPELGKQDITLF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           ++ + LE     GL +   ++  GNR++ T ++  +N   T   +LG        + +M 
Sbjct: 183 ILEKDLE-----GLSFGEKEDMFGNRTSPTGDIYLNNVSITNKSILGHPGDGLQTLYNMI 237

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L   +++ + M   + +++ Y+  R      + +   +++ + DI ++I     ++
Sbjct: 238 SLDRLLYGLVAAAFMEGLMFKSLEYSNDRVAFKTPIANHQYIQQKLTDIKMNIETTKLIT 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +   ++ ++     +EA+   +M  + KY   +         M+  G SGY+  + I++ 
Sbjct: 298 Y---SALEKLIKNDDEAS---LMCSMAKYIGTESLFQTAQHVMQIHGHSGYMVGQ-ISKL 350

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +++S    I  G+ +   +++ N ++K
Sbjct: 351 FQDSAGTRIAGGTSDIQRVNMFNQMQK 377


>gi|118471048|ref|YP_886192.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172335|gb|ABK73231.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 389

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRARADGDD-WVLNGTKCWITNGGKSSWYTVMAVTDPDKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHQDDEGFSVGPKERKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKDRKQFGTSISDFQAVQFMLADMAMKVESARLMVYH 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K     +A  V  +A++  GG+GY ++  + R  R
Sbjct: 311 AA-----ARAERGEKNLGFISAA-SKCLASDIAMEVTTDAVQLFGGAGYTQDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|15597211|ref|NP_250705.1| isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218892027|ref|YP_002440894.1| putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa
           LESB58]
 gi|254235097|ref|ZP_04928420.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa C3719]
 gi|254240451|ref|ZP_04933773.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa 2192]
 gi|9948019|gb|AAG05403.1|AE004628_1 putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126167028|gb|EAZ52539.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa C3719]
 gi|126193829|gb|EAZ57892.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa 2192]
 gi|218772253|emb|CAW28035.1| putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa
           LESB58]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++ D  + L+G K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRVGD-RFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 187 TAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDV---EVPEENVLGAVNGGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  V + +A     + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAAACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|260427196|ref|ZP_05781175.1| isobutyryl-coa dehydrogenase, acyl-coa dehydrogenase family member
           8 [Citreicella sp. SE45]
 gi|260421688|gb|EEX14939.1| isobutyryl-coa dehydrogenase, acyl-coa dehydrogenase family member
           8 [Citreicella sp. SE45]
          Length = 379

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 34/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D AA+ ++ +   +G + L+G K F+S    SDA++++A+   +G  G  + 
Sbjct: 124 LTEPGSGSDAAALRTRAEPAGNG-WALTGTKAFISGGGYSDAYVVMARSGADGPRG--IS 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++EDG+  GL +  L+ K+G ++  T +++          LLG         E+ K  
Sbjct: 181 AFVIEDGT-EGLSFGGLEQKMGWKAQPTRQVQMDGCVIPAANLLG---------EEGKGF 230

Query: 316 IY----LDSAIMSVSGMRVSLAEAIHYARRRHVSG----GILIDQ-PVMKRAIADIALDI 366
            Y    LD   +++S   +  A+A   A  R+++     G  IDQ   ++  +AD+ +++
Sbjct: 231 RYAMAGLDGGRLNISACSLGAAQAALDATLRYMAERRAFGQSIDQFQALQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA     + A   D+       A  A     + K +  +    V  + ++  GG GY+ 
Sbjct: 291 QAARTFLRQAAWKLDQG------APDATKFCAMAKKFVTEAGSKVADQCLQLHGGYGYLA 344

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454
           +  I +  R+   + IL G+   M L V
Sbjct: 345 DYGIEKIVRDLRVHQILEGTNEIMRLIV 372


>gi|126513505|gb|ABO15843.1| acyl-CoA dehydrogenase [Streptomyces vitaminophilus]
          Length = 379

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           G  +TE   G+D++ +    +++ DG + L+G K F+S+ P+SD FI     + + G F 
Sbjct: 122 GNAITEAESGSDVSRLAVTARRV-DGGWVLNGEKSFVSNGPVSDVFITYGTTDPKAGPFG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V   + + S  G+      +K+G        + F++TF   + D NV   P +   I  +
Sbjct: 181 VTGFVVERSAEGVFPSEPFDKMGLLQCPAGSVRFADTF---VPDENVLGEPGQGGWIFQH 237

Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +      +    V LA+      I + R R   G  L +   +   IAD+ L + +A  
Sbjct: 238 SMGWERACLFAGYVGLADRVIESCIAHVRGRRQFGKRLSEFQAVSHRIADMKLRLESARL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R     D       + A A +   ++K    +   A   +A+   GG GY  +  I 
Sbjct: 298 LLYRACWEMD-------QGAPATLSIALSKLAVSEGVLASALDAVRIFGGRGYQRDHGIE 350

Query: 432 RHYRESPANSILLGSGN 448
              R++  + I  G+ +
Sbjct: 351 AALRDAVPSVIFSGTSD 367


>gi|221124737|ref|XP_002160383.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 527

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 52/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQ----------V 249
           LTE   G+D A+I +  +   DG + +   G  W  +  +++ F + AQ          +
Sbjct: 89  LTEPTSGSDAASIRTSAKLSPDGKHWIMNGGKLWISNGGIAEIFTVFAQTPVKDEKSGEI 148

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDL 302
           + ++  F+V R     S  G+     + K+G + + T E+ F       +N  G + G  
Sbjct: 149 KNKITAFIVER-----SFGGVTSGPPEKKMGIKCSNTAEVYFEDVKIPTANVLGEVGGGF 203

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            V+   + + +          ++SG + SL ++A+ +A  R   G  +ID  V++  +A 
Sbjct: 204 KVAMNILNNGRF-----GMAAALSGTQRSLISQAVTFAANRTQFGQKIIDYGVIQEKLAR 258

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+      ++++ +    D   +  +      + A I+K +  + A  V  E ++ +GG
Sbjct: 259 MAVRQYVTESMAYMVCGIMDNGFTDFQ------LEAAISKIYASESAWEVADETIQILGG 312

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            GY++     R  R+               L +  + E GTN   +LF TL
Sbjct: 313 MGYMKGSGTERVMRD---------------LRIFRIFE-GTNDILRLFVTL 347


>gi|239817685|ref|YP_002946595.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804262|gb|ACS21329.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 390

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 15/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  +G Y L+G K W  +   +D  ++ A+ E  +G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLKAEK-KNGYYVLNGGKMWITNGGDADTLVIYAKTEPEMGARGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T  L F N     + + NV  G     K+L+  
Sbjct: 187 TAFIVEKGFKGFSAGTKLDKLGMRGSNTYPLFFDNC---EVPEENVLGGEGMGAKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG     M   +   + +   R   G  + +  +M+  +AD+     A  A 
Sbjct: 244 LDYERAVLSGGPLGIMAACMDAVLPFIHERKQFGQSIGEFQLMQGKLADMYSTWQATRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D    R++ A   R  A     +  + A  +  EA++ +GG GY ++  + R
Sbjct: 304 VYAVGKACD----RNDHARTFRKDAAGAILYSAEKATWMAGEAIQALGGVGYTKDFPVER 359

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 360 LWRDAKLYEIGAGT 373


>gi|321252194|ref|XP_003192319.1| acyl-CoA dehydrogenase, long-chain specific precursor [Cryptococcus
           gattii WM276]
 gi|317458787|gb|ADV20532.1| Acyl-CoA dehydrogenase, long-chain specific precursor, putative
           [Cryptococcus gattii WM276]
          Length = 517

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 38/265 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF 256
           I L ++E   G+D+A + +   K  DG + ++G K ++S  M SD F      EG +  F
Sbjct: 253 ISLAISEAFAGSDVAGLRTTATKQEDGSWVINGTKKWISGGMHSDYF-----TEGGLTAF 307

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR        G+  +++K    + +  T  + F N    +        GP ED  +L+
Sbjct: 308 LVPRT------EGVETKQIKTSY-STAAGTAYITFDN----VKVPAENMLGP-EDGGLLV 355

Query: 317 YLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L +           S+   RV + E + +A +R V G  L+ Q V++  +A +   I A
Sbjct: 356 ILSNFNHERWVMCCASIRSSRVIVEECLKWAAQRRVFGKPLLAQAVIRAKLASMIAKIEA 415

Query: 369 ATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A    +++++ N   + +SR+     A +    T++     A  +  +A+   GG G 
Sbjct: 416 LQAWLENVTYQMCNMTYKEQSRNLAGQIAFLKMQSTRF-----AGEIADDAVNIFGGRGL 470

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + + +  R    ++IL G+
Sbjct: 471 TKTGMGKFVEQFQRTQKFDAILGGA 495


>gi|317130139|ref|YP_004096421.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475087|gb|ADU31690.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 593

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 39/308 (12%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  ++  +D F++ A+V+G +   F++
Sbjct: 149 LTEPSSGSDALGAKTTAKLNDAGTHYVLNGEKQWITNAGFADVFVVYAKVDGEQFTTFIL 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R  E     G+     + K+G + ++T  L   +       +LG+  +  G V    IL
Sbjct: 209 ERDYE-----GVSTGPEEKKMGIKGSSTRTLILEDALVPIENVLGE--IGKGHVIAFNIL 261

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   +  V G ++ +  +  YA  R      +    ++++ +A++A    AA +  
Sbjct: 262 NIGRWKLGVGCVGGAKLGIELSAKYANERKQFKRPISKFTLIQKKLAEMAAKTYAAESTI 321

Query: 374 FRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +R     DEA            K+  +  A   I   + K +  ++   V  EA++  GG
Sbjct: 322 YRTGGLIDEAFQALSAEQQKDGKAVGKAIAEYAIECSLNKVFGSEVLDFVADEAVQIHGG 381

Query: 422 SGYIEERSIARHYRESPANSILLGSG--NAMVLDV----------LNLLEKGTNLFEQLF 469
            G++ E  +   YR S  N I  G+   N M++            L LLE+  +L E+L 
Sbjct: 382 YGFMAEYEVETMYRNSRINRIFEGTNEINRMLVPATIMRKAMKGELPLLEQAGSLQEELM 441

Query: 470 STLEQDLG 477
             + Q++G
Sbjct: 442 MMMPQEVG 449


>gi|312113483|ref|YP_004011079.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218612|gb|ADP69980.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 393

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A++ ++  K+ DG Y LSG K W  +SP++D  ++ A+    +G++  
Sbjct: 134 FGLTEPDSGSDPASMRTRAVKV-DGGYLLSGQKMWITNSPIADIAVVWAKSDAHDGKIKG 192

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V R        G    +++ K+  R++ T E+     F   + + N+  G        
Sbjct: 193 FVVER-----GTKGFSTPKIEGKLSLRASITGEIVLDEAF---VPEENLLPGASGLAGPF 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   ++      AE   +A R     R   G  L    +++  +A +  +IA A 
Sbjct: 245 GCLNKARYGIAWGVTGAAEFCWHAARDYTLARKQFGRPLAANQLVQFKLAGMQTEIALAL 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R+    DE  +  E  +       + K   C  A  +  +A +  GG+G  +   +
Sbjct: 305 QAALRVGRMLDEGTAAPEAIS-------LIKRNNCIKALDIARQARDMHGGNGIADSFHV 357

Query: 431 ARH 433
            RH
Sbjct: 358 MRH 360


>gi|270015759|gb|EFA12207.1| hypothetical protein TcasGA2_TC005123 [Tribolium castaneum]
          Length = 332

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 36/275 (13%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P   T++     LTE   G+D  A+ +  +K  DG  + ++G K W  +S ++  F+++A
Sbjct: 62  PQLATNMCSSFALTEPSSGSDAFALKTTAKK--DGSDFLINGSKMWISNSDLAGLFLVMA 119

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
             +   G     CFL+ R     +P GL     + K+G  ++ T  L F N       +L
Sbjct: 120 NADPSSGYKGITCFLIER----DTP-GLTVAIPEKKLGLCASGTCMLTFDNVRVPESAIL 174

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
           G+        +  KI   +L+   + +    V LA+      I Y   R   G  + +  
Sbjct: 175 GEYG------KGYKIAAGFLNEGRVGIGAQMVGLAQGCFDATIPYTLERTQFGKSIFNFQ 228

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            M+  IA IA  I +A  L +  A   +      +EAA A       K++   +A     
Sbjct: 229 GMQHQIAQIATQIESARLLVYNAARLVENGHPFIKEAAMA-------KWYSADVAQQTCV 281

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + ++ +GG G+ ++    + YR+    SI  G+ N
Sbjct: 282 KCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYN 316


>gi|271964937|ref|YP_003339133.1| acyl-CoA dehydrogenase-like protein [Streptosporangium roseum DSM
           43021]
 gi|270508112|gb|ACZ86390.1| acyl-CoA dehydrogenase-like protein [Streptosporangium roseum DSM
           43021]
          Length = 404

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           TP    +W P++F    D           V +G    +E   G+D+ AI ++     D  
Sbjct: 106 TPEQMGEWLPQMFGTPED-----------VRLGAFCASEPDAGSDVGAIRTRAVPSGDD- 153

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKI 279
           + L G K W  +  ++D  I++A V+  +G      F+VP         GL   R   K 
Sbjct: 154 WILDGVKTWATNGGIADVHIVVASVDPSLGTRGQASFIVPP-----GTAGLAMGRKFRKH 208

Query: 280 GNRSNATVELEFSNT---FGFLLGD--------LNVSTGP-VEDMKILIYLDSAIMSVSG 327
           G R++ T E+   N       LLG           V +G    +   +   ++   SV+ 
Sbjct: 209 GIRASHTAEVILDNVRVPGSCLLGGREKLDARLARVRSGERAGEQAAMRTFETTRPSVAA 268

Query: 328 MRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           M V +A A +     YAR R   G  + +   +   +AD+A  +  A  +++R A     
Sbjct: 269 MAVGIARAGYEYARDYAREREQFGRRIGENQAIAFLLADMATRVDVARLMTWRAAWMARN 328

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +F +A     E +  +++A     W       V  +A++ +GG+GY  E  + R +R+
Sbjct: 329 NRAFGQA-----EGSMCKLVAGEAAVW-------VTEQAIQILGGAGYTREHPVERFHRD 376

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 377 AKIFTIFEGT 386


>gi|116748700|ref|YP_845387.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697764|gb|ABK16952.1| isovaleryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 394

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 26/261 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           LGLTE   G+D   + ++  +  D  Y L+G K F+++ P++D  ++ A+ +   G   +
Sbjct: 123 LGLTEPNAGSDAMGLRTRAVRKGDK-YILNGTKMFITNGPVADVLLVYAKTDPERGAKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              + +    G    R   K G R + T EL F        N  G     +NV T  ++ 
Sbjct: 182 SAFIVEKEFPGYKVSRKLKKCGMRGSPTGELVFEDCEVPAENLVGEENKGVNVVTSGLDI 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I++   S  M+    + +L  +I Y+  R   G  +    ++++ +AD+     AA  
Sbjct: 242 ERIVLAGGSLGMA----QQALDYSIRYSVEREQFGRPIASFQMIQQKLADMYARTEAAKL 297

Query: 372 LSFRLA----NSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L ++ A    NS    K    ++ AA   + A  T  W C        +A++  GG GY 
Sbjct: 298 LVYKAAQVARNSPRGGKGTELTKLAAAGILFAAETATWVCD-------QAVQIHGGYGYC 350

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + + +R++    I  G+
Sbjct: 351 LEFPVQKLWRDAKLYEIGAGT 371


>gi|332222215|ref|XP_003260262.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 1 [Nomascus leucogenys]
          Length = 421

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 114/257 (44%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +      V   
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPVNKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     ++ G  
Sbjct: 219 FTGFIVEADTP-GVQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKIAMGAF 277

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 278 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 334 RMSYQRAAWEIDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 386

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 387 VEKLMRDAKIYQIYEGT 403


>gi|330929560|ref|XP_003302688.1| hypothetical protein PTT_14605 [Pyrenophora teres f. teres 0-1]
 gi|311321794|gb|EFQ89219.1| hypothetical protein PTT_14605 [Pyrenophora teres f. teres 0-1]
          Length = 554

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 108/269 (40%), Gaps = 25/269 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 278 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGE-GM 336

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
             V  LL + S  G+  +++  + G  S+ T  + F        N  G +     V    
Sbjct: 337 NGVSLLLIERSAGGVSTRKMDCQ-GVWSSGTTYITFEDVKVPVENVIGKVNQGFKVIMTN 395

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               +I I     I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A
Sbjct: 396 FNHERIGI----IIQCLRFARVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIEA 451

Query: 369 A----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAMECIGGS 422
           +      L F+     D         A A + A  T    +C + A  +        GG 
Sbjct: 452 SYNWMENLIFQCEKMNDMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQ 511

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G      + R YR+  A +I  GS   M+
Sbjct: 512 G----AKVERLYRDVRAYAIPGGSEEIML 536


>gi|218783000|ref|YP_002434318.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764384|gb|ACL06850.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D + I +   K  D  Y ++ +K F+++  ++D  ++  +     G    PR
Sbjct: 125 LTEPNAGSDASGIQAVALKDGDH-YVVNANKVFVTNGGVADTCLIFVRTNPEAG----PR 179

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
                + E G+P G     L++  G R N    +  ++              G  +G   
Sbjct: 180 GISVIVAERGTP-GFVVGDLEDLCGMRCNPVSSIRLNDCRIPEDHLLGKEGIGLAIGLAG 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + TG          +  A  ++   + +L E I Y+++R      +     +   IAD+A
Sbjct: 239 LDTG---------RIGIAAQALGIAQAALEEGIRYSKQRRQFKVPIAKHQSVANMIADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  + +R A   D  KS S+E+A A++ A  T       A  V   A++  GG G
Sbjct: 290 TQVDAARLMVYRAAALKDLKKSFSKESAMAKLFAAET-------ASTVTDMAVQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y ++  + R++R++    I  G+
Sbjct: 343 YSKDYPVERYFRDARVTRIYEGT 365


>gi|188583967|ref|YP_001927412.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179347465|gb|ACB82877.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 418

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 57/299 (19%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           D + +A + K++    +G   L+E   G+D+A + ++  +  D        +W   +  +
Sbjct: 125 DDSRRALLAKSARGQWIGSIALSEPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGA 184

Query: 241 DAFIMLAQV------EGR---VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
           D   +LA+V      E R   +  FLV  + E G+ P G+    + +KIG     T EL+
Sbjct: 185 DFIEVLARVRDPEPGEPRSAGLEPFLV--VKEPGTFPKGMTGTVI-DKIGYHGFLTFELK 241

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340
                      L+    P  D    +Y D      SG   S+   ++ AR          
Sbjct: 242 -----------LDGVRVPERDRLTGLYGDEGADGDSGGFASVQRGLNIARVHTAARAVGV 290

Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                         R   G  +     ++ A+AD+A ++A A A   ++A+  DE     
Sbjct: 291 ARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAAEVAQARAYWQQVAHLLDEGLPAE 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+A  +++A        +MA  V  +AM+  GG+GY  ER I R++R++   +I  G+
Sbjct: 351 SESAGVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRIERYWRDARLTTIFEGT 402


>gi|145298895|ref|YP_001141736.1| acyl-CoA dehydrogenase family protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851667|gb|ABO89988.1| acyl-CoA dehydrogenase family protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 343

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 57/332 (17%)

Query: 116 HCSIWDRSFE---PVVRKQAHKIRAARLYLMAQ--------LEAGHL-----MSPSVTSA 159
           H + WDR  E   P + KQA  +    LY   Q        L+A  +     M  + T+A
Sbjct: 27  HAARWDRDHEFPIPTI-KQAAALGFCGLYTPEQYGGLGLPRLDASLIFERLAMGCTSTTA 85

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            +        +   W P   + E+ P     +    +     LTE   G+D AA+ ++  
Sbjct: 86  YLTIHNMVSWMLGSWLPAAVAEEWVPR----LASGELLGSYCLTEPGAGSDAAALKTRAV 141

Query: 220 KISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQR 274
           +  D  Y + G K F+S   S D  +++A+  G     +  F+VP        +G+ Y +
Sbjct: 142 RDGDD-YLIDGSKVFISGAGSTDVLVVMARTGGDGAKGISAFMVP-----ADSDGIVYGK 195

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSG 327
            + K+G  S  T E+ F+       + LG        +   ++  +I I    A  SV  
Sbjct: 196 AEEKMGWNSQPTREVAFNGVRIPASYRLGQEGEGFKFAMQALDGGRINI----ATCSVGT 251

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L +A+ Y ++R   G  + +   ++  +AD+A ++AAA  +  + A+  D      
Sbjct: 252 AQQALDDALRYVQQRQQFGHPISEFQSVQFRLADMATELAAARLMVRQAADKLDRG---- 307

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                    +P    WC  MA     + M  I
Sbjct: 308 ---------SPDKSAWCA-MAKRFATDVMRLI 329


>gi|158316068|ref|YP_001508576.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111473|gb|ABW13670.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 379

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 117/301 (38%), Gaps = 38/301 (12%)

Query: 169 RVHKDWAPKIF---SREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           R+H D +   F     E   T   P +    +   L LTE   G+D+A  T+  +   D 
Sbjct: 88  RIHADISVPYFVDHGNEEQKTRWLPGLASGELVAALALTEPGAGSDLAGFTTTARLDGDH 147

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F++  + +D F+   + +       +  L+  G   G+      +KIG   
Sbjct: 148 -YVVNGSKTFITGGLNADLFLTAVKTDPTQRHAGLSLLVIPGDLPGVSRGAPLHKIGLHI 206

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--------MSVSGMRVSL 332
              VE+ F +       LLG         E+ +   YL S +        ++  G   S+
Sbjct: 207 QEAVEIFFDDVRVPVANLLG---------EEGQGFTYLTSHLVQERLSIAINAQGAAASI 257

Query: 333 AE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEE 389
            E  + Y   R V G  L      K  +A  A ++ A  AL     LA+   EA      
Sbjct: 258 VEQTVAYVNGRKVFGKTLNTFQNTKFVLAGCATEVEAGQALLDQVLLAHVTGEATPAD-- 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K +C +M   VI   ++  GG GYI E  +AR + ++    I  GS   
Sbjct: 316 -------AAMVKLYCTEMQGRVIDSCLQLFGGYGYINEYPVARAWADARVGRIYGGSSEI 368

Query: 450 M 450
           M
Sbjct: 369 M 369


>gi|325520672|gb|EGC99721.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 572

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 69/317 (21%)

Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
           L+E + G+ ++ I ++    G+      Y L+G+K ++S    +       ++LA++   
Sbjct: 146 LSEPQAGSSLSDIATRADFDGESPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 205

Query: 250 EGR-------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L        G  N +    L +K+G R      L F     
Sbjct: 206 HGRLPPGTRGISLFIVPKYLPGADAGARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 265

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   GFL+G+ N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 266 HRPGGRAGAIGFLVGEPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 320

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     +             ++  P ++R +      +    AL    A   D+A  R+
Sbjct: 321 NRPQGRPLGPAGKDAAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDQA--RA 378

Query: 388 EEAAYAR--------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            E A+AR        I+ PI K W  +   A    A++  GG GY  + ++ R YR++  
Sbjct: 379 HEDAHARTDAARLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRL 438

Query: 440 NSILLGSGNAMVLDVLN 456
           N I  G+     LD+L 
Sbjct: 439 NPIHEGTHGIQALDLLG 455


>gi|299143608|ref|ZP_07036688.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518093|gb|EFI41832.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 380

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 26/270 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD A    Q   + DG  Y L+G K F+++   +D FI++A  +   G   
Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLDGDEYILNGTKIFITNAGFADTFIIIAMTDKSKGTRG 180

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +   ++E G+P G      ++K+G R ++T EL F N       LLG      G    MK
Sbjct: 181 ISAFIVERGTP-GFRVGEPEDKMGIRGSSTCELIFENCRIPKENLLGREGKGFGIA--MK 237

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L   D   + ++   + +AE      + Y + R   G  L      +  +AD+     A
Sbjct: 238 TL---DGGRIGIASQALGIAEGAIDETVVYVKERKQFGKRLSQFQNTQFQLADMKAKTDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A+     ++ S  AA A++ A  T       A  V    ++  GG GY  + 
Sbjct: 295 AQLLVYRAADMKYNGEAYSHAAAMAKLFAAET-------ASDVTRRCLQLFGGYGYTRDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            I R  R++    I  G+   M + + N +
Sbjct: 348 PIERMMRDAKITEIYEGTSEVMRMVISNWM 377


>gi|229197268|ref|ZP_04323999.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           m1293]
 gi|228586227|gb|EEK44314.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           m1293]
          Length = 382

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGKEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 189 ---NTIGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|261404636|ref|YP_003240877.1| Acyl-CoA dehydrogenase type 2 domain-containing protein
           [Paenibacillus sp. Y412MC10]
 gi|261281099|gb|ACX63070.1| Acyl-CoA dehydrogenase type 2 domain protein [Paenibacillus sp.
           Y412MC10]
          Length = 400

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 30/235 (12%)

Query: 216 SQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCY 272
           +  +++S G + ++G K F + SP+   F++ A +E   +VG FLV       S  G+  
Sbjct: 148 TTARRVSGG-WRITGRKTFSTLSPILKQFVVTAGIEHSEKVGAFLV------RSGPGVKV 200

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--------VEDMKILIYLDSAIMS 324
           +   N +G R+  + ++   + F   + D  V  GP        V    IL+++ +  M 
Sbjct: 201 EETWNTMGMRATGSHDVILEDVF---VPDTEVIRGPDYEKPEFPVPTEGILLHIPACYMG 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILI---DQPVMKRAIADIALDIAAATALSFRLANSFD 381
           ++    + A  I +ARR H    + +   + P ++R IA I +D+  A +  ++ A+ +D
Sbjct: 258 IAYAARNFA--IDFARR-HQPNSLTVPIAELPNVQRQIAQIEVDLLTARSYLYQTADRWD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    +E  A  +    + KY        ++ +AM  +GG     +  + R YR+
Sbjct: 315 K---EAENRAALKPELGLAKYVVTNATVRIVDQAMRIVGGLSLSRKLPLERMYRD 366


>gi|127511833|ref|YP_001093030.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126637128|gb|ABO22771.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 391

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 29/265 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           +  E       P   T   +G  GLTE   G+D   + ++ ++I DG Y L+G K W  +
Sbjct: 114 YGNEQQRQKYLPKLATGEWVGCFGLTEPDVGSDPGGMKTRAERI-DGGYRLNGAKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-F 295
           SP++D F++ A+++G +  F++ + ++     GL   +++ K   R++ T E+   N   
Sbjct: 173 SPIADVFVVWAKLDGVIRGFILEKGMK-----GLSAPKIEGKFSLRASITGEIVMDNVEV 227

Query: 296 G--FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           G   LL ++    GP         L+ A   ++   +  AE   +A R++    I  ++P
Sbjct: 228 GEEALLPNVEGLKGP------FGCLNKARYGIAWGALGAAEFCWHAARQYSLDRIQFNRP 281

Query: 354 -----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
                ++++ +AD+  +I        +     D      ++A     ++ I +  C K A
Sbjct: 282 LAATQLIQKKLADMQTEITTGLFACLQAGRLMD------QDALPVEAISLIKRNSCGK-A 334

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   + +  GG+G  +E  + RH
Sbjct: 335 LEIARTSRDMHGGNGISDEFHVIRH 359


>gi|327188504|gb|EGE55717.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 391

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 34/271 (12%)

Query: 178 IFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           IFS   D   K   P   +   IG  GLTE   G+D   + ++ +KI  G Y L G K W
Sbjct: 108 IFSYGSDEQKKKFLPGLVSGELIGCFGLTEPDAGSDPGGMKTRAEKIEGG-YRLRGSKMW 166

Query: 234 FLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +SP++D F++ A+ E     +  F++ + ++     GL   ++  K+  R++ T E+ 
Sbjct: 167 ISNSPIADVFVVWAKSEAHNNEIRGFVLEKGMK-----GLSAPKICGKLSLRASITGEIV 221

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
                 T   LL  ++   GP         L+ A   +S   +  AE     A  Y   R
Sbjct: 222 MDGVEVTEDALLPGVSGLKGP------FGCLNRARYGISWGVMGAAEDCWFRARQYGLDR 275

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    + ++ +AD+  +I      S R+    DE K   E       M  + K 
Sbjct: 276 KQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDEHKMAPE-------MVSLVKR 328

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             C  A  +  +A +  GG+G   E  + RH
Sbjct: 329 NNCGKALDIARQARDMHGGNGIQIEYHVMRH 359


>gi|318061311|ref|ZP_07980032.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318080059|ref|ZP_07987391.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
          Length = 390

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           L+E   G+D AA++++  +   G + LSG K W     +SD   +LA+  G     V  +
Sbjct: 133 LSEPTAGSDAAALSTKAVR-DGGDWVLSGTKAWITHGGVSDFCTVLARSGGPGAKGVTAY 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP         GL     + K+G + + T +L F    G  +GD        E   + L
Sbjct: 192 LVP-----ADAPGLSAAPPERKMGLKGSPTAQLHFD---GVRVGDERRIGAEGEGFSLAL 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   V LA+A   A       R   G  + D   ++  +AD+A  + A  
Sbjct: 244 DALDAGRLGIAACAVGLAQAALDAALDWAAERRQFGRAIGDFQGLRFLLADMATAVEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     + +AA A+++       C   A  V  +A++  GG GY  +  +
Sbjct: 304 ALYLAAARRKDAGLPYARQAAMAKLL-------CTDNAMKVTTDAVQVFGGYGYTSDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYLREAKVLQIVEGT 372


>gi|294085548|ref|YP_003552308.1| acyl-CoA dehydrogenase-like protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665123|gb|ADE40224.1| acyl-CoA dehydrogenase-like protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 395

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D AA+ ++ +K SDG Y ++G K W  ++P++D F++ A+    +G++  
Sbjct: 137 FGLTEPDAGSDPAAMKTRAEKTSDG-YRITGSKMWISNAPIADVFVVWAKSDAHDGKIKG 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           +L ++    GP    
Sbjct: 196 F----ILEKGMA-GLTAPKIGGKLSLRASVTGEIVMDAVEVGEDAILPNVEGLKGP---- 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +  R++       D+P     + ++ +AD+  +IA
Sbjct: 247 --FGCLNRARYGISWGVMGAAEDCWHRARQYGLDRKQFDRPLAQTQLFQKKLADMQTEIA 304

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S RL    DE +       +A  +  I K   C  A  +   + +  GG+G    
Sbjct: 305 LGLQGSLRLGRLMDEGR-------FAPEIISIMKRNNCGKALDIARASRDMHGGNGIQIG 357

Query: 428 RSIARH 433
             I RH
Sbjct: 358 YHIMRH 363


>gi|146343640|ref|YP_001208688.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196446|emb|CAL80473.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 389

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 38/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----G 254
           +G++E   G+D+A+I +Q +   D      G  W  +   +D   +LA   +G V     
Sbjct: 123 IGVSEPGAGSDVASIKTQARADGDDYVINGGKMWITNGTQADFICLLANTSDGPVHRNKS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302
              VP         G+   R  +K+G RS+ T ++ F N              GF    +
Sbjct: 183 LICVPM-----KSRGVQVARKLDKMGMRSSDTAQIFFDNVRVPKRNRVGEEGMGFTYQMM 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +      +    AI++ +         I Y R R   G  ++D  V+   +A++
Sbjct: 238 QFQEERLWAGAACLKAHEAIINAT---------IEYTRNRKAFGRSILDNQVVHFRLAEL 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++    AL+++ A    EA    E+      +A + K    ++   +    ++  GG 
Sbjct: 289 QTEVELLRALTYQAA----EALVAGEDVTR---LATMVKLKTGRLGRELTDACLQYWGGM 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G++ E  ++R YR+S  +SI  G+   M+
Sbjct: 342 GFMNETPVSRAYRDSRLSSIGGGADEVML 370


>gi|72161685|ref|YP_289342.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915417|gb|AAZ55319.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 47/324 (14%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   +   A ++  + T    + W P I S E         +  +VAI    +E   G+
Sbjct: 87  QIFEANTGPAQVINYLGTEEQRERWLPDIISGE---------KTMAVAI----SEPDAGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSP 267
               + +  +   DG Y ++G K W  +   +D +++ A++    G   +  L+ E G+P
Sbjct: 134 AATDMRTTARPSGDG-YVITGTKRWISNGGEADLYLVYARLTDEPGSKGIGALVVEKGTP 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEF-------------SNTFGFLLGDLNVSTGPVEDMKI 314
            GL +   +  +G R   + ++               +  FG L G  ++          
Sbjct: 193 -GLSFGPPERLMGFRGIPSADVILDEVWVPKENLVVPAGGFGKLFGVFSIER-------- 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L +  MS+   + +L   I Y + R   G  LI+   ++  +AD+ + + +A  L  
Sbjct: 244 ---LGNTTMSLGIGQEALDRTIAYVQEREQFGKPLIEFQSVQITLADMVMQVDSARLLQQ 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A S +  K          +   + K    +MA  V   AM+  GG+GY EE  I R +
Sbjct: 301 RAAASAEGGKLPDP------LQVSLAKCAANEMAKRVTDMAMQLHGGNGYTEEYGIERLH 354

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++   +I  G+ N   + +++ L
Sbjct: 355 RDAHGWAIAGGTPNMQRIRIVSEL 378


>gi|327263272|ref|XP_003216444.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 452

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D   + ++ +   S   Y L+G K W  +SPM+D  ++ A  E G+V  F
Sbjct: 191 FGLTEPNHGSDPGGMETRAKYNPSRKTYTLNGTKTWITNSPMADLCVVWAVCEDGKVRGF 250

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           LV R        GL   +++ K   R++ T       VE+   N    LL +++   GP 
Sbjct: 251 LVER-----GTKGLSTPKIEGKFSLRASITGMIVMEDVEIPEEN----LLPNVSGLAGPF 301

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             +    Y   A  ++      +  A  Y   R      L    ++++ +AD+  +I   
Sbjct: 302 GCLNNARY-GIAWGALGAAEFCMQTARQYTLDRMQFKVPLARNQLIQKKLADMLTEITIG 360

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    DE K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 361 LQACLQLGRLKDEDKATPE-------MISMLKRNSCGKALEIARQARDMLGGNGIADEYH 413

Query: 430 IARH 433
           + RH
Sbjct: 414 VIRH 417


>gi|313676142|ref|YP_004054138.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942840|gb|ADR22030.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 379

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +  +   D  Y ++G K W  +   +  ++++AQ +   G   +  
Sbjct: 125 LSEPEAGSDATSQRTTAEDKGD-YYLVNGTKNWITNGNSASVYLVIAQTDKEKGHKGINA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYL 318
           L+ +    G    + + K+G R         S+T   +  D+ V   P E+   +     
Sbjct: 184 LIVERETEGFVVGKKEEKLGIRG--------SDTHSLMFQDMKV---PKENRIGEDGFGF 232

Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + A+ +++G R+ +A             A+ Y++ R   G  +     +   +AD+A  I
Sbjct: 233 NFAMSTLNGGRIGIAAQALGIASGAYELALKYSKERKAFGKEISQHQAIAFKLADMATQI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L  + A   D+ +  S+ +A A++       +  ++A     EA++  GG G+++
Sbjct: 293 ETARLLCLKAAWLKDQKQDFSQASAMAKL-------YASQVAMDTTVEAVQVHGGYGFVK 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R  R++    I  G+
Sbjct: 346 EYHVERLMRDAKITQIYEGT 365


>gi|229105620|ref|ZP_04236254.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-28]
 gi|228677890|gb|EEL32133.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-28]
          Length = 605

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 120 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 172

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 173 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----EYAGV 227

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 228 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 286 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 345

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 346 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 404

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 405 MYRDSRINRIFEGT 418


>gi|221121754|ref|XP_002162242.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 626

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 52/291 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQ----------V 249
           LTE   G+D A+I +  +   DG + +   G  W  +  +++ F + AQ          +
Sbjct: 188 LTEPTSGSDAASIRTSAKLSPDGKHWIMNGGKLWISNGGIAEIFTVFAQTPVKDEKSGEI 247

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDL 302
           + ++  F+V R     S  G+     + K+G + + T E+ F       +N  G + G  
Sbjct: 248 KNKITAFIVER-----SFGGVTSGPPEKKMGIKCSNTAEVYFEDVKIPTANVLGEVGGGF 302

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            V+   + + +          ++SG + SL ++A+ +A  R   G  +ID  V++  +A 
Sbjct: 303 KVAMNILNNGRF-----GMAAALSGTQRSLISQAVTFAANRTQFGQKIIDYGVIQEKLAR 357

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+      ++++ +    D   +  +      + A I+K +  + A  V  E ++ +GG
Sbjct: 358 MAVRQYVTESMAYMVCGIMDNGFTDFQ------LEAAISKIYASESAWEVADETIQILGG 411

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            GY++     R  R+               L +  + E GTN   +LF TL
Sbjct: 412 MGYMKGSGTERVMRD---------------LRIFRIFE-GTNDILRLFVTL 446


>gi|187928530|ref|YP_001899017.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187725420|gb|ACD26585.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 622

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 67/318 (21%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +S+  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----- 292
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKLIPGVKGISLFIVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 293 -----------NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                         G+L+G+    L      + + +I + + + ++  +G       A+ 
Sbjct: 284 RPKGADGQPRPGAIGYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGY----LHAVD 339

Query: 338 YARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YAR R     +             ++D   ++R +      +  A  L+   A   DE +
Sbjct: 340 YARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEER 399

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ A  A+      I+ PI K W  +      + A++  GG GY  E ++ + YR++ 
Sbjct: 400 GETDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNR 459

Query: 439 ANSILLGSGNAMVLDVLN 456
            N I  G+     LD+L 
Sbjct: 460 LNPIHEGTHGIQGLDLLG 477


>gi|73541160|ref|YP_295680.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72118573|gb|AAZ60836.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 393

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 106/251 (42%), Gaps = 7/251 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAERKGD-RYVLNGTKMWITNGPDCDVLVVYAKTEPELGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F +        L    G  + +   +  
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPAENILGAENGGAKVLMSGLDY 247

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           + A++S   +  M+  +     Y   R   G  + +  +++  +AD+   + AA +  + 
Sbjct: 248 ERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + D   S           A I   +  + A  +  E ++ +GG+GYI E    R +R
Sbjct: 308 VGKNLDSLGSDHVRQVRKDCAAVI--LYTAEKATWMAGETVQILGGNGYINEYPAGRLWR 365

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 366 DAKLYEIGAGT 376


>gi|27376093|ref|NP_767622.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349232|dbj|BAC46247.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 345

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 108/273 (39%), Gaps = 32/273 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----G 254
           +G++E   G+D+A+I +  +   D      G  W  +   +D   +LA   +G V     
Sbjct: 80  IGVSEPGAGSDVASIKTAARSDGDDYVINGGKMWITNGTQADWICLLANTGDGPVHRNKS 139

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              VP         G+   R  +K+G RS+ T ++ F N        +       E+ K 
Sbjct: 140 LICVPM-----KAKGVTVARKLDKMGMRSSDTAQIFFDNV------RVPKRNRIGEEGKG 188

Query: 315 LIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             Y         L  A   +      + E I Y R R   G  ++D  V+   +A++  +
Sbjct: 189 FTYQMIQFQEERLWGAAACLKAHEYIINETIEYTRNRKAFGQSILDNQVVHFKLAEMQTE 248

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL +R   +    +  +  A  A++ A        ++   +    ++  GG G+ 
Sbjct: 249 VELLRALIYRAGEALVAGEDVTRLATMAKLKAG-------RLGRELTDACLQYWGGMGFT 301

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  ++R YR+S   SI  G+   M++ +  ++
Sbjct: 302 NETPVSRAYRDSRLTSIGGGADEVMLMVLCKMM 334


>gi|328886006|emb|CCA59245.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 381

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 26/259 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML----AQVEGRV 253
           G  L+E + G+D AA++ + ++  DG  Y + G K +++      F  L    A     +
Sbjct: 124 GYSLSEPQAGSDAAALSCKAERQDDGSGYRIHGTKAWITHGGRAGFYALFARTAPGSHGI 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL P     G+  GL +   + K+G ++  T    +    G LL    +     + ++
Sbjct: 184 SCFLAP-----GATEGLSFGAPERKMGLQAVPTTSAYWD---GALLEADRLVGDEGQGLQ 235

Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I    LDS  + ++     LA+A     + YA  R   G  +ID   +   +AD+A  + 
Sbjct: 236 IAFSALDSGRLGIAACATGLAQAALDAAVSYANERTTFGRRIIDHQGLGFLLADMAAAVD 295

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A     A   D  +  S +A+ A+++A  T       A  V  +A++ +GG GY  +
Sbjct: 296 AARATYLDAARRRDLGRPFSRQASAAKLLATDT-------AMKVTTDAVQVLGGYGYTRD 348

Query: 428 RSIARHYRESPANSILLGS 446
             + R+ RE+    I  G+
Sbjct: 349 FPVERYMREAKITQIFEGT 367


>gi|294628906|ref|ZP_06707466.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832239|gb|EFF90588.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 383

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 22/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA------QVEGR 252
           + +TE   G+D+A I S  +  SDG  Y L+G K ++S       +++       + + R
Sbjct: 123 IAITEPEAGSDVAGIRSAARLASDGTHYVLNGVKAYVSGGAQADLVLVVCRTSADETDRR 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G  L   L  D +  G+        +G RS+  V + F++     + D+    G   D 
Sbjct: 183 GGMSL---LAVDTAAPGVSIHSEPTTLGLRSSDIVHMTFTDVR-VPVTDVMGRPGEAFDC 238

Query: 313 KILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
              I+    L  A+ + +    ++   + + R R   G  +      K  IAD    ++A
Sbjct: 239 LADIFPQERLGIAVGAYAHAAAAVRLTVEHVRTRTAFGKPVAAFQNTKFVIADCHATVSA 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A+  +   +FD     +EEAA        TK +C + A  ++ + ++  GG G+  + 
Sbjct: 299 LRAVVDQALEAFDAGGLTAEEAA-------ATKLYCTETASGILDKCLQLHGGLGFTMDH 351

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR Y ++ A+ I  G+   M
Sbjct: 352 PIARLYADNRASRIFGGTSEIM 373


>gi|26347561|dbj|BAC37429.1| unnamed protein product [Mus musculus]
          Length = 378

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D   + ++ +   S+  Y LSG K W  +SP++D FI+ A+ E      +
Sbjct: 117 FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNC---I 173

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              +LE G   GL   R++ K   R++AT       VE+   N    +L +++   GP  
Sbjct: 174 RGFILEKGM-RGLSAPRIEGKFSLRASATGMIIMDSVEVPEEN----VLPNVSSLAGPFG 228

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  +     L  A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 229 CLNTARYGITWGVLGAA--EFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLG 286

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 287 LHACLQLGRLKDQDKATPE-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYH 339

Query: 430 IARH 433
           + RH
Sbjct: 340 VIRH 343


>gi|311279779|ref|YP_003942010.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
 gi|308748974|gb|ADO48726.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
          Length = 380

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F+ SS  +   +++A+        +   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYVVVMARDAASPDKPIFTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  EL F N        FG      N      +  +
Sbjct: 183 WCLDMSKPGIKVNKLE-KLGLRMDSCCELTFDNVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + A     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNA----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +S+        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLYEAAWKSDNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|296083170|emb|CBI22806.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 24/241 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++ +   K+  G + L G K W  +S  +D  I+ A+     ++  ++V
Sbjct: 181 LTEPDYGSDASSLKTTATKVEGG-WILEGQKRWIGNSTFADVLIIFARNTTTNQINGYIV 239

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILI 316
            +    G+P GL   +++NKIG R     +++F   F   + D +   G    +D   ++
Sbjct: 240 KK----GAP-GLTATKIQNKIGLRIVQNGDIQFKKVF---VPDEDRLPGVNSFQDTNKVL 291

Query: 317 YLDSAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   +++   + +S+   +  H Y + R   G  L    + ++ + ++  +I A T + 
Sbjct: 292 AVSRVMVAWQPIGISMGAYDMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVG 351

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL   +++ K     A+ A       K W    A   +A   E +GG+G + +  +A+ 
Sbjct: 352 WRLCKLYEKGKMTPGHASLA-------KAWITLKARETLALGRELLGGNGILADFLVAKA 404

Query: 434 Y 434
           +
Sbjct: 405 F 405


>gi|229026467|ref|ZP_04182824.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1272]
 gi|228734930|gb|EEL85568.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1272]
          Length = 608

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 123 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 175

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V    E   P G+
Sbjct: 176 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIV----EKEYP-GV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 231 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 289 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 348

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 349 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 407

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 408 MYRDSRINRIFEGT 421


>gi|56541110|gb|AAH87036.1| Acyl-Coenzyme A dehydrogenase, very long chain [Rattus norvegicus]
 gi|149053147|gb|EDM04964.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_c
           [Rattus norvegicus]
          Length = 655

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 29/296 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQ----------V 249
           LTE   G+D+A+I S       G  Y L+G K W  +  ++D F + A+          V
Sbjct: 216 LTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAV 275

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVST 306
           + ++  F+V R    G  +GL  +++  K  N S      V++   N  G +     V+ 
Sbjct: 276 KEKITAFVVERSF-GGVTHGLPEKKMGIKASNTSEVYFDGVKVPAENVLGEVGDGFKVAV 334

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + + +  +    A      M+  +A+A+ +A  R   G  + +  V++  +A +A+  
Sbjct: 335 NILNNGRFGM----AATLAGTMKAIIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQ 390

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               ++++ L+ + D+     +      I A I+K +  + A  V  E ++ +GG G+++
Sbjct: 391 YVTESMAYMLSANMDQGFKDFQ------IEAAISKIFGSEAAWKVTDECIQIMGGMGFMK 444

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG 480
           E  + R  R+     I  G+ + + L V     ++KG  L   L + L+  LG+ G
Sbjct: 445 EPGVERVLRDIRIFRIFEGTNDILRLFVALQGCMDKGKEL-TGLGNALKNPLGNVG 499


>gi|209520070|ref|ZP_03268846.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209499501|gb|EDZ99580.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 403

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 21/273 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   +  AI    L+E + G+D+AA+    ++  D  Y L G K W  +  ++D +++ A
Sbjct: 128 PRVASGTAIAAFALSEPQAGSDVAAMALAAREEGDH-YALDGEKTWISNGGIADFYVVFA 186

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +     G   +   + D    GL      + I    +    L F+N        L V   
Sbjct: 187 RTGEAPGARGISAFIVDAQTPGLEIAERIDVIA--PHPLARLRFANARVPKSQMLGV--- 241

Query: 308 PVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           P E  KI      +     A  S+   R ++AE +  A  R + G  L D  + +  +A 
Sbjct: 242 PGEGFKIAMRTLDIFRTSVAAASLGFARHAMAEGLARAASRKMFGQTLGDFQLTQAKLAQ 301

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL I ++  L +R A   D+ +S + EAA A       K+   + A  VI  A++  GG
Sbjct: 302 MALTIDSSALLVYRAAWLRDQGESVTREAAMA-------KWHASEGAQQVIDAAVQLYGG 354

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            G     ++   YRE  A  I  G+     L V
Sbjct: 355 MGVQSGTAVEMLYREIRALRIYEGATEVQQLIV 387


>gi|6978435|ref|NP_037023.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rattus norvegicus]
 gi|1168287|sp|P45953|ACADV_RAT RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=VLCAD; Flags: Precursor
 gi|559722|dbj|BAA06331.1| very-long-chain Acy1-CoA dehydrogenase [Rattus norvegicus]
          Length = 655

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 29/296 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQ----------V 249
           LTE   G+D+A+I S       G  Y L+G K W  +  ++D F + A+          V
Sbjct: 216 LTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAV 275

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVST 306
           + ++  F+V R    G  +GL  +++  K  N S      V++   N  G +     V+ 
Sbjct: 276 KEKITAFVVERSF-GGVTHGLPEKKMGIKASNTSEVYFDGVKVPAENVLGEVGDGFKVAV 334

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + + +  +    A      M+  +A+A+ +A  R   G  + +  V++  +A +A+  
Sbjct: 335 NILNNGRFGM----AATLAGTMKAIIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQ 390

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               ++++ L+ + D+     +      I A I+K +  + A  V  E ++ +GG G+++
Sbjct: 391 YVTESMAYMLSANMDQGFKDFQ------IEAAISKIFGSEAAWKVTDECIQIMGGMGFMK 444

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG 480
           E  + R  R+     I  G+ + + L V     ++KG  L   L + L+  LG+ G
Sbjct: 445 EPGVERVLRDIRIFRIFEGTNDILRLFVALQGCMDKGKEL-TGLGNALKNPLGNVG 499


>gi|308178427|ref|YP_003917833.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307745890|emb|CBT76862.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 410

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 19/255 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +  +     LTE   G+D  ++ ++  K+  G Y LSG K W  +  +    I+ A+
Sbjct: 144 PMLRGELPGAFALTEPTHGSDSVSLETRAAKVQGG-YRLSGEKKWIGNGSIGGVSIVWAR 202

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            E G+V  F+V +  E     G     ++NK+  R+     +   N F     D+  +  
Sbjct: 203 DEQGKVRGFIVHQDAE-----GYSATTIENKLSLRAIWQAHIRMENVF-VPDEDVMPNAQ 256

Query: 308 PVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +D   +++   L  A  +V         A++YA++R   G  L    +++  +A +  
Sbjct: 257 SFKDTSRVLFATRLGVAWSAVGHATACYESAVNYAKQRVQFGRPLAQSQIVQERLARMQS 316

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++A    L         +A  R          A + KY   + A  + + A + +GG+G 
Sbjct: 317 ELATMQVLVM-------QATKREGAGDLTGPQASLAKYTATRTARVIASNARDLLGGNGI 369

Query: 425 IEERSIARHYRESPA 439
           +    +ARH+ +  A
Sbjct: 370 LTSNRVARHFADVEA 384


>gi|83311687|ref|YP_421951.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946528|dbj|BAE51392.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 394

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 23/272 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           ++E   G+D+ A+T++   + DG  Y + G K W  ++ ++D + + A++    G   + 
Sbjct: 137 ISEADAGSDVGAMTTKA--VLDGDHYVIDGAKTWISNAGLADFYTVFARIGDGEGAKGLA 194

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             + D    GL      + +      +  L F N     +   N+   P +  K+ + + 
Sbjct: 195 AFVVDARTPGLSVSERIDVMAPHPLGS--LRFDN---MRVPAANLLGKPGDGFKVAMSVL 249

Query: 320 SAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  G       R ++ EA+  + +R   G  L D  +++  IAD+A+ +  +  L 
Sbjct: 250 DVFRTTVGAAALGFARRAMDEAVSRSVKRKAFGSRLADFQLIQAKIADMAVAVDTSALLI 309

Query: 374 FRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +R A   D    R + EA+ A       K W  + A  VI +A++  GG G I   ++ +
Sbjct: 310 YRSAWVKDTKGGRVTREASMA-------KLWATEQAQMVIDQAVQIWGGLGVISGMAVEQ 362

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            YRE  A  I  G+     L + + + +G  L
Sbjct: 363 LYREIRALRIYEGTSEIQKLVIASKVYEGLTL 394


>gi|296411505|ref|XP_002835471.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629255|emb|CAZ79628.1| unnamed protein product [Tuber melanosporum]
          Length = 426

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 35/259 (13%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           M K  +    GLTE   G+D  ++   ++      G+  L G K W  +SP++D  ++ A
Sbjct: 155 MAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKKGVCLLFGSKTWITNSPIADVLMVWA 214

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG 300
           +++ ++  FLV R     +P  L    +K+K G R++ T       VE+   N F     
Sbjct: 215 KLDCKIRGFLVER--ATAAPGTLSTPAIKDKTGLRASITGMIMLDGVEVPEENMF----A 268

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPV 354
           D++   GP         L++A   ++ G   +L + I  AR     R+   G  L    +
Sbjct: 269 DVDGLRGPFS------CLNNARYGIAWGTMGALEDCITRARIYALERKQFKGNPLAKYQL 322

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ +AD   D A   A    +    D+     E       M  + K   C  A A    
Sbjct: 323 VQKKLADATTDAAFGLAACLHVGRLKDKGLCAPE-------MISMIKRQNCDRALANARI 375

Query: 415 AMECIGGSGYIEERSIARH 433
             E  GG+   +E    RH
Sbjct: 376 LQEIFGGNAVSDEYGTGRH 394


>gi|195015164|ref|XP_001984148.1| GH15160 [Drosophila grimshawi]
 gi|193897630|gb|EDV96496.1| GH15160 [Drosophila grimshawi]
          Length = 578

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 45/311 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ S              +V     LTE   G+D  +I S+  K 
Sbjct: 113 IMLYGTPEQKEKYLPKVASE-------------TVYAAFALTEPSSGSDANSIRSRAVKS 159

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +   ++   + AQ E           +V  F+V R        G
Sbjct: 160 ADGKHYVLNGSKIWISNGGWAEVMTVFAQTEQLDKKTGQMKDKVTAFIVERAF-----GG 214

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM----S 324
           +   + + K+G +++ T E+ F N     +   NV     E  K+ +  L+S       +
Sbjct: 215 VTSGQPEKKMGIKASNTAEVYFDNV---KIPIENVLGKEGEGFKVAVNILNSGRFGMGAT 271

Query: 325 VSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +SG M+  +  A  +A  R   G  +     ++  +A + +   A  +++F +A + D  
Sbjct: 272 LSGTMKKCIEIATEHANNRVQFGQKIKTFGTIQEKLARMNILQYATESMAFMIAQNMD-- 329

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S S++     +   I+K +  + A  V  EA++ +GG G++ E  + R  R+     I 
Sbjct: 330 -SGSQD---YHLETAISKIYASECAWQVCDEAIQILGGMGFMRETGLERIMRDLRIFRIF 385

Query: 444 LGSGNAMVLDV 454
            G+   + L V
Sbjct: 386 EGTNEVLRLFV 396


>gi|189069248|dbj|BAG36280.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 21/271 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           P       IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGSLSDVVIVV 216

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E       +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 217 AVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGE 276

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            N   G    MK L    L  A +++S       E  +Y ++R   G  +     ++  +
Sbjct: 277 EN--KGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHQL 334

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I    A    + N     +++  ++A     A + KYW  ++  +V  + ++  
Sbjct: 335 AELKTHICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYDCVQLH 387

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 388 GGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|221066924|ref|ZP_03543029.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711947|gb|EED67315.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 406

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 36/274 (13%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIML 246
           AP+ +   AI   LTE + G+D  A+  Q + + +G  Y L+G K F+S SP +D  +++
Sbjct: 138 APVARAEKAICFALTESQAGSDAGAL--QTRAVREGEHYVLTGRKRFISGSPFADFAVLM 195

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL------------EFS 292
           A    EG     +    ++  +P        K   G      + L            E  
Sbjct: 196 ASTAPEGSAEREISAFFVDLAAPGVEVVGGYKTMAGQSHTGDIHLNAVRVPVAQLIGEPG 255

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
              G  LG + V+         L++   A++ ++  + +L +A  YA  R      +   
Sbjct: 256 RGLGLALGRITVNR--------LLHC-PAMLGLA--QCALRDARDYALSRQQFDRSIAQF 304

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A D  AA AL  + A + D           AR  A ++K +C + A A+ 
Sbjct: 305 QSIQHMLADMATDWVAARALMIQTARALDAGID-------ARAQASMSKLFCSEKAFAIA 357

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             A++  GG G ++ R +   +R      +L G+
Sbjct: 358 DRAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTGT 391


>gi|229489223|ref|ZP_04383089.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324727|gb|EEN90482.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 393

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M++   TP     + P++ S E             +     ++E   G+D+AAI+++ 
Sbjct: 96  AHMISAHGTPEQKAKYLPRLASGE-------------LTGAFSMSEPALGSDVAAISTKA 142

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF--IMLAQVEG------RVGCFLVPRLLEDGSP-NG 269
           ++   G Y ++G K +L++  S     +++   EG       +   L+ +    G    G
Sbjct: 143 KRTDSGDYVITGQKMWLTNGGSSTLVAVLVKTDEGAEKPHNNLTTILIEKPAGFGEVLPG 202

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK-ILIYLDSAIMSVSG 327
           L       K+G +   T E+ F    GF +G   V  G P    + ++  ++   ++V+ 
Sbjct: 203 LTIPGKLEKMGYKGIDTTEMIFD---GFEIGAEEVLGGTPGSGFRHMMDGVEVGRVNVAA 259

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ YA++R   G  + +   +   IA++   + AA  +    A   D 
Sbjct: 260 RACGIAQRAFELAVTYAKQRETFGKPIAEHQAIAFRIAEMGTKVEAAHLMMVNAARLKDS 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +          + A + KY   +    V  ++    GG GY +E  I R  RE+P   +
Sbjct: 320 GERND-------VAAGMAKYLASEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAP--FL 370

Query: 443 LLGSGNA 449
           L+G G +
Sbjct: 371 LIGEGTS 377


>gi|197106484|ref|YP_002131861.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196479904|gb|ACG79432.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 383

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD   I++  +K+ D  Y +SG K W   +  SD  ++L +   R      
Sbjct: 118 FGVTEPDAGTDTTRISTFAKKVGDK-YVVSGRKIWISRAEHSDLMVLLCRTTPRDQAKKP 176

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
              +   LV   +     NGL  + ++  +   ++AT EL F +               F
Sbjct: 177 SDGMSVLLVD--MRQAVGNGLTIRPVRTML---NHATTELFFEDLEVPAENLIGEEGKGF 231

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   +   R  +  A  YA+ R V G  + +   +
Sbjct: 232 RYILDGMNAE-------RILI----AAECLGDARFFIDRASQYAKDRVVFGRPIGENQGV 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A   + +  A+ +  R A  F+  +    EA  A+++A    ++   M        
Sbjct: 281 QFPLARAHVQMTGASLMVDRAAELFEAGEPCGTEANMAKLVASEASWFAADM-------C 333

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+ EE  I R +RE+
Sbjct: 334 LQTHGGFGFAEEYDIERKFRET 355


>gi|326942825|gb|AEA18721.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 594

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----EYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|300932557|ref|ZP_07147813.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 381

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 31/271 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
           G GLTE   G+D A  T    K+ DG + ++G K F+++  +D    + +  V G+    
Sbjct: 121 GFGLTESEAGSD-AGGTKTTAKLEDGEWVINGSKQFITNSGTDITKLVTVTAVTGQRDNG 179

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
              +   +VP   E     G   +   NK+G  ++ T  L F+N       L+G+     
Sbjct: 180 KKEISAIIVPSGTE-----GFVAEPAYNKVGWNASDTHPLTFNNVRVPEENLVGERG--R 232

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + + IL    +  A ++    +  + E++ YA+ R   G  + D          I+ 
Sbjct: 233 GFAQFLSILEEGRIAIAALACGAAQGCVDESVRYAKERTSFGKPISDYQA-------ISF 285

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IA   A ++    ++  A  +          A I K  C + A     +A +  GG G+
Sbjct: 286 KIARMEARAWTARQAWHAAAEKMVAGQDCAKEASIAKMICSEAAMDNARDATQIHGGYGF 345

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + E  ++RHYR+S    + +G G   V  +L
Sbjct: 346 MNEYRVSRHYRDSKI--LEIGEGTTEVQQML 374


>gi|68535259|ref|YP_249964.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68262858|emb|CAI36346.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 388

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 22/240 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ ++  +  D  + L+G K W  +SP++D  ++ A+ E     F++
Sbjct: 133 FGLTEPDAGSDPASMKTRATRDGDE-WVLNGTKMWITNSPVADVAVVWARTEDGFAGFIL 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + +E     G     +  K+  R++ T E+   N        L  ++   GP+  +   
Sbjct: 192 EKGME-----GFTTPEIHKKLSLRASITGEIVLDNCRVPDSQRLPKIDTLRGPLTCLNEA 246

Query: 316 IYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y    I+  ++   R SL  AI YA+ R V G  L    + +  +A++++++  +  L+
Sbjct: 247 RY---GIIWGALGAARDSLETAIEYAQTREVFGKSLSSYQLTQAKLANMSVELNKSVLLA 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +L    D+ +    + +  ++ +         +A  +  E    +G SG   E S  RH
Sbjct: 304 LQLGRLKDKGELAPHQVSVGKLNS-------TGVALEIARECRTLLGASGITLEYSPLRH 356


>gi|86141033|ref|ZP_01059592.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85832975|gb|EAQ51424.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 454

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 54/295 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           + L  +    ++W PK             MQK       GLTE   G+  A  + +  +K
Sbjct: 170 IYLCGSEEQKQEWLPK-------------MQKFEKIGAFGLTEPEVGSGAAGGLGTSCKK 216

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           + D  + L+G K W  ++  SD  I+ A+ E  G V  F+V +        G   +++K+
Sbjct: 217 VGDE-WILNGEKKWIGNATFSDITIIWARDEDSGSVKGFIVRK-----ENPGFHAEKMKD 270

Query: 278 KIGNRS--NATV-----------ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           K+  R+  NA +            L+ +N+F      L ++   V           A  +
Sbjct: 271 KMALRTVQNALITLTDCRVPESDRLQNANSFKDTAKVLQMTRASV-----------AWQA 319

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ Y ++R   G  +    +++  + ++  ++ A   L FRL+   D  +
Sbjct: 320 VGCARGAYEAALKYTKKREQFGRPIASFQLIQNHLVEMISNLTAMQTLCFRLSEMQDGGQ 379

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              E A+ A++       +C      V++ A E +GG+G + E  +AR   ++ A
Sbjct: 380 LTDEHASLAKV-------FCSMRTRDVVSRAREVMGGNGILLEYDVARFVADAEA 427


>gi|323495205|ref|ZP_08100289.1| isovaleryl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
 gi|323310564|gb|EGA63744.1| isovaleryl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
          Length = 389

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 30/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  Y L+G K W  + P +D  ++ A+ E   G   +
Sbjct: 130 LAMSEPNAGSDVISMQLKAELNGDH-YLLNGSKMWITNGPDADVVVVYAKTEPDKGSHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S +   + +  +K+G R + T EL F+N       +LG++N      + +K+L
Sbjct: 189 TAFIVERSVSQFQHAQKLDKLGMRGSNTCELVFNNCPVPIENILGEVN------QGVKVL 242

Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   ++  +G    M+  L   I Y   R   G  + +  +++  +AD+     AA
Sbjct: 243 MSGLDYERVVLAAGPLGIMQACLDLVIPYVHDRKQFGRSIGEFQLVQAKVADMYTRSNAA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +AN+ D   +  ++AA   +       +  ++A  +  +A++ +GG+GYI E  
Sbjct: 303 RAYVYAVANACDSGHASRKDAAGVIL-------YSAELATQIALDAIQLLGGNGYINEFP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 356 AGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|294628581|ref|ZP_06707141.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831914|gb|EFF90263.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 398

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 19/260 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P+      IG  GLTE   G+D AA+ +  ++  DG  + L+G K W  
Sbjct: 121 FGSEEQKQRWLPVMAAGEVIGCFGLTEPDHGSDPAAMRTHAKR--DGSDWVLNGRKMWIT 178

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ AQ E  +  F VP         G     +K+K   R++ T EL   +  
Sbjct: 179 NGSVAGVAVVWAQTEDGIRGFAVPT-----DTPGFSAPEIKHKWSLRASVTSELVLDDVR 233

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L +    I+  ++   R S   A+ YA+ R   G  +    
Sbjct: 234 LPADAVLPEVTGLRGPLSCLSHARYGIVWGAMGAARSSFEAAVEYAKSREQFGRPIGGFQ 293

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +  
Sbjct: 294 LTQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI-- 351

Query: 414 EAMECIGGSGYIEERSIARH 433
                +G +G   E  + RH
Sbjct: 352 -----LGANGISLEYPVMRH 366


>gi|254419531|ref|ZP_05033255.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185708|gb|EDX80684.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 599

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 46/309 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ +  I ++    +DG Y L G K ++S    D       ++LA++EG     
Sbjct: 166 LSEPQAGSSLGDIRTRAVPQADGSYRLFGSKMWISGGDHDLSETIVHMVLARMEGAPAGV 225

Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
             +  F+VP+ L  E+G+P   N +    L +K+G R      L F              
Sbjct: 226 KGISLFVVPKHLLDENGAPGERNDVVLAGLNHKMGYRGTTNTLLNFGEGRHAPGGQGGAV 285

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-- 353
           G+L+G  +     +  M     +     + +        A+ YAR R     +    P  
Sbjct: 286 GWLVGAPHQGLAAMFHMMNEARIGVGAGAAALGYTGYLHALDYARGRPQGRPLSAKDPAS 345

Query: 354 ---------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
                          + ++A A+ AL +    A       + ++A  R        ++ P
Sbjct: 346 PPVPIIEHADVRRMLLAQKAYAEGALGLNLYCARLTDDQTTAEDAAERDRAGRLLDMLTP 405

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           I K W  +      + A++ +GG GY  +  + + YR++  N I  G+     LD+L   
Sbjct: 406 IAKSWPSQWCLEGNSLAIQVLGGYGYTRDYPVEQFYRDNRLNPIHEGTHGIQGLDLLGRK 465

Query: 457 -LLEKGTNL 464
            +++ G+ L
Sbjct: 466 AIMDGGSGL 474


>gi|4501857|ref|NP_001599.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Homo sapiens]
 gi|223590148|sp|P28330|ACADL_HUMAN RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|177962|gb|AAA51565.1| long chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|24660234|gb|AAH39063.1| Acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|40352988|gb|AAH64549.1| Acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|62822332|gb|AAY14881.1| unknown [Homo sapiens]
 gi|119590887|gb|EAW70481.1| acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|123979764|gb|ABM81711.1| acyl-Coenzyme A dehydrogenase, long chain [synthetic construct]
 gi|123994531|gb|ABM84867.1| acyl-Coenzyme A dehydrogenase, long chain [synthetic construct]
 gi|446551|prf||1911479A long chain acyl-CoA dehydrogenase
          Length = 430

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 21/271 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           P       IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGSLSDVVIVV 216

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E       +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 217 AVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGE 276

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            N   G    MK L    L  A +++S       E  +Y ++R   G  +     ++  +
Sbjct: 277 EN--KGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKL 334

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I    A    + N     +++  ++A     A + KYW  ++  +V  + ++  
Sbjct: 335 AELKTHICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYDCVQLH 387

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 388 GGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 418


>gi|296233055|ref|XP_002761832.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 438

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNCGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R++AT       VE+   N    +L   +   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPKIQGKFSLRASATGMIIMDSVEVPEEN----MLPGASSLGGPFG 288

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +    Y +   ++  S        A  YA  R   G  L    ++++ +AD+  +I   
Sbjct: 289 CLNNARYGITWGVLGAS--EFCFHTARQYALDRIQFGVPLAKNQLIQKKLADMLTEITLG 346

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  
Sbjct: 347 LHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 399

Query: 430 IARH 433
           + RH
Sbjct: 400 VIRH 403


>gi|229193284|ref|ZP_04320235.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 10876]
 gi|228590261|gb|EEK48129.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 10876]
          Length = 600

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----DYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|149756844|ref|XP_001504933.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase [Equus
           caballus]
          Length = 438

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D  ++ ++ +    G  Y L+G K W  +SP++D F++ A+ E GR+  F
Sbjct: 177 FGLTEPNHGSDPGSLETRARHNPSGRSYTLNGTKTWITNSPVADLFVVWARCEDGRIRGF 236

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L    LE G   GL   +++ K   R++AT       VE+   N    +L + +   GP 
Sbjct: 237 L----LEKGM-RGLSAPKIEGKFSLRASATGLIVMDDVEVPEEN----VLPNASGLAGPF 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  
Sbjct: 288 G------CLNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKATPE-------MISLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARH 433
            +E  + RH
Sbjct: 395 SDEYHVIRH 403


>gi|296532865|ref|ZP_06895534.1| probable isovaleryl-CoA dehydrogenase protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296266821|gb|EFH12777.1| probable isovaleryl-CoA dehydrogenase protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 408

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++  D  Y L+G K W  + P +D  ++ A+ +   G    
Sbjct: 149 LAMSEPEAGSDVVSMRLRAERQGD-HYRLNGSKMWITNGPDADVLVVYARTDPAPG---- 203

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306
           PR     ++E G P G    R  +K+G R + T EL F        N  G     +N+  
Sbjct: 204 PRGISAFVVEKGFP-GFRPGRKLDKLGMRGSNTAELVFEECRVPAENRLGEEGQGVNILM 262

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + ++    A   +  MR  L   + Y R+R   G  + +  +M+  +AD+   +
Sbjct: 263 SGLDYERAVL----AGGPLGIMRACLDLVLPYLRQRRQFGRPIGEFQLMQGKLADMYTRM 318

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A  + +A + D  +   ++AA A + A        + A A+  EA++C+GG+GYI 
Sbjct: 319 NAARAYVYTVARACDRGQVTRQDAAGAILHA-------AEAATALALEAIQCLGGNGYIN 371

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 372 EYPAGRLLRDAKLYEIGAGT 391


>gi|262278971|ref|ZP_06056756.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259322|gb|EEY78055.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 430

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 25/209 (11%)

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK----IGNRSNATVELEFSNT 294
           ++D F++ A   G+   F+V            C   +  K    +G ++  T  L F++T
Sbjct: 237 LADVFLVSADFNGKPDIFVVQ-----------CNDSISIKNTPAMGLKATETATLRFNHT 285

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LG  +       D+  L++   A+ +   ++   A  I YA  R   G  +  +  
Sbjct: 286 PALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTAFGEPISHRQS 342

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IAD+A++I A   L    A+  +  K    EA  A+++       C + +  +  +
Sbjct: 343 VAFMIADMAIEIDAMRMLVLNAASLAESGKPFHREAYLAQLL-------CAEKSMKIGTD 395

Query: 415 AMECIGGSGYIEERSIARHYRESPANSIL 443
            ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 396 GVQILGGHGFTKEHPVERWYRDLRATAIL 424


>gi|159036532|ref|YP_001535785.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915367|gb|ABV96794.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 387

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA++++ ++  D  + L+G K W  ++ +SD + + A  +   G   +  
Sbjct: 131 LSEPEAGSDAAAMSTRAERDGDH-WVLNGVKRWITNAGVSDFYTVFAVTDSAAGSRGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + + S  G+ +   + K+G + + T E+        +  D  +          +  LD 
Sbjct: 190 FVVEKSDPGVSFGAPEKKLGIKGSPTCEVYLDGV--RIPADRMIGAEGTGFATAMQTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++++   V +A+     A  Y R R   G  + D   ++  +AD+ + + AA  L++ 
Sbjct: 248 TRVTIAAQAVGIAQGALDYAKGYVRERRQFGRAVADFQGVQFMLADMGMKLEAARQLTY- 306

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  A  RSE   A         K +    A  +  +A++ +GG GY  +  + R  
Sbjct: 307 ------AAAGRSERGDADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMM 360

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 361 RDAKITQIYEGT 372


>gi|115969291|ref|XP_001195219.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 744

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 25/281 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
           L ++E   G+D+ ++  + ++  D  Y L+G K W  + P +D  ++ A+    VE   G
Sbjct: 481 LAMSESGSGSDVVSMKLKAER-KDDHYLLNGSKFWITNGPDADVLVVYAKTDLGVEPSQG 539

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
             +   L+E G  +G    +  +K+G R + T EL F +       ++G LN     +  
Sbjct: 540 --ITTFLIEKGM-DGFSTAQKLDKLGMRGSNTCELVFEDCKVPVENVMGSLNKGVYVLMS 596

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  L  A   +  M+ +   A  Y  +R   G  + +  +M+  +AD+   + +  +
Sbjct: 597 GLDLERLVLAAGPIGLMQAACDVAFPYLHQRKQFGRPIGEFQLMQGKMADMFTRLNSIRS 656

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D     + + A   ++A  T    C        +A++C+GG+GYI +    
Sbjct: 657 YVYNVARAADRGHVSARDCAGVILVAAETATQVC-------LDAIQCLGGNGYINDYPTG 709

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           R  R+  A    +G+G + V  ++     G +  E+  STL
Sbjct: 710 RLLRD--AKLYEIGAGTSEVRRLI----IGRSFNEEFKSTL 744


>gi|321470919|gb|EFX81893.1| hypothetical protein DAPPUDRAFT_302851 [Daphnia pulex]
          Length = 644

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 36/273 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA---------QVE 250
           LTE   G+D A++ ++     DG  + ++G+K W  +  ++D F + A         ++E
Sbjct: 203 LTEPGSGSDAASVQTKAVLSDDGNHWIMNGNKIWISNGGIADFFTVFAKTSVRGKTGEME 262

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            RV  FLV R        G+ + + ++K+G R + T ++ F N     +   NV      
Sbjct: 263 DRVTAFLVERNF-----GGVTHGKPEDKLGIRGSNTCQVFFENV---PIPKENVLGEVGA 314

Query: 311 DMKI-LIYLDSAIMSV----SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI L  L+S   S+    +GM   L   +  +A  R   G  L++  +++   A +A+
Sbjct: 315 GFKIALNILNSGRFSMGSSGAGMLKKLVGWSAEHAINRKQFGKPLMEFELIQEKFAKMAV 374

Query: 365 DIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            I A  ++++  +   D  E    + EAA  ++ +     W C       +E ++ +GG 
Sbjct: 375 TIYAMESMAYLTSGMLDTYEEPDCAMEAAMVKVFSS-EAVWNC------TSECLQILGGL 427

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY+++    R  R+  A  +L+  G   +L +L
Sbjct: 428 GYMKDYPYERFLRD--ARILLIFEGTNEILRIL 458


>gi|288554041|ref|YP_003425976.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545201|gb|ADC49084.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 594

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 39/310 (12%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+++G +   F+V
Sbjct: 150 LTEPSSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFVVYAKIDGEQFTAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            +  E     G+     + K+G + ++T  L   +       +LG+  +  G V    IL
Sbjct: 210 EKDYE-----GVSTGPEEKKMGIKGSSTRTLILEDALVPKENILGE--IGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   +  V   + +L  A  YA  R      +    +++  +A++A    AA +  
Sbjct: 263 NVGRYKLGVGCVGSSKRALELAAKYANERKQFKTPIGKFSLIQEKLANMATATYAAESSI 322

Query: 374 FRLANSFDE--AKSRSEEAAYARIMA-PITKYWC-CKMAPA--------VIAEAMECIGG 421
           +R    F+E       EE    R +A  I +Y   C +           V  EA++  GG
Sbjct: 323 YRTGGLFEERLGGLSDEEQKDGRAVANAIAEYAIECSLNKVSGSETLDYVADEAVQIHGG 382

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLF 469
            G++ E  + R YR+S  N I  G+     L V            L LL+K T L E+L 
Sbjct: 383 YGFMAEYEVERIYRDSRINRIFEGTNEINRLLVPGTIMRKAMKGELPLLQKATALQEELM 442

Query: 470 STLEQDLGSS 479
             + Q++G S
Sbjct: 443 MMMPQEIGDS 452


>gi|212533107|ref|XP_002146710.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072074|gb|EEA26163.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 400

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 26/255 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251
            G+TE   G D   + +   K SD  Y +SG K W   S ++   I+LA+          
Sbjct: 125 FGVTEPNTGLDTLKLKTTATKNSDNTYLVSGQKVWITCSQVASVMILLARTMSLEETQRP 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
             G  +    L+  +P GL  +R+K K+G R+    E+ F N       L+G  N     
Sbjct: 185 TEGLSMFAINLDRKNP-GLELKRIK-KMGGRAVDANEVFFDNYEIPADTLVGKAN----- 237

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI+++ +++    ++G  + L      +A  YA+ R V G  +     +   +AD 
Sbjct: 238 -DGFKIILHGMNAERCLLAGEALGLGYAALEKASLYAKERQVFGRPIGKNQAIAHPLADA 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGG 421
            + + AA   ++  A  +D +K+ S  ++ A   A    KY   + A      A+   GG
Sbjct: 297 YMRLEAAKLATYHAARMYDASKTDSSISSQAVGTACNSAKYLAAEAAYTACERAVMTHGG 356

Query: 422 SGYIEERSIARHYRE 436
            GY  E  + R  RE
Sbjct: 357 MGYAVEYDVERWLRE 371


>gi|89055560|ref|YP_511011.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865109|gb|ABD55986.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 404

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 32/257 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D + + +  +K + G Y L+G K W  +SP++D FI+ A
Sbjct: 135 PKLATGEWIGCFGLTEPDAGSDPSGMKTVARKTAAG-YVLNGAKMWISNSPIADVFIIWA 193

Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           + E   G++  F    +LE   P GL   ++ +K+  R++ T E+   N       LL +
Sbjct: 194 KSEAHGGKIRGF----VLEKDMP-GLSAPKIGDKLSLRASVTGEIVMENVAVGEEALLPN 248

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMK 356
           +    GP         L+ A   +S   +  AE    A R++       D+P     + +
Sbjct: 249 VEGLKGP------FGCLNRARYGISWGVIGAAEFCMAAARQYGLDRTQFDRPLAQTQLYQ 302

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I      S ++    D+  +  E       M  + K   C  A      A 
Sbjct: 303 KKLADMLTEITLGLQASLQVGRLMDDGNAAPE-------MISLIKRNNCGKALDAARLAR 355

Query: 417 ECIGGSGYIEERSIARH 433
           +  GG+G   E  + RH
Sbjct: 356 DMHGGNGISSEFQVFRH 372


>gi|87198880|ref|YP_496137.1| butyryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134561|gb|ABD25303.1| Butyryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 380

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 34/268 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ +  +   D  Y ++G K F+S   ++D ++ + +  G  G   +  
Sbjct: 126 LTEPGSGSDAAALKTTARLEGDH-YVVNGTKQFISGGGVNDLYVTMVRT-GDNGAKGISC 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306
           L+ +    G+ +   + K+G  ++ T ++ F N               F F +  L+   
Sbjct: 184 LVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLDGGR 243

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L+    S+ G +  L EA+ Y + R   G  + +    +  +AD+A D+
Sbjct: 244 -----------LNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ AL +  A     AK  +      R  A + K        +++  A++  GG GY+ 
Sbjct: 293 EASRALLYLAA-----AKVTANAPDKTRFSA-MAKKLATDNGSSIVDRALQMFGGYGYLR 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454
           +  I R +R+   + IL G+   M + V
Sbjct: 347 DYPIERFWRDLRVHRILEGTNEVMRMIV 374


>gi|163855420|ref|YP_001629718.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259148|emb|CAP41448.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 327

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 18/252 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVP 259
           LTE   G+D AA  +  ++  DG  Y L+G K F+S+       I+LA  +   G     
Sbjct: 74  LTEPHAGSDTAAFRTSARR--DGTEYVLNGSKQFISNGSEAGLAIVLAVTDPTAGKRGKS 131

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             L D    G    R+++K G  +    ++E  +     G L+G      G  + M +L 
Sbjct: 132 LFLVDPKQPGYEVARVESKYGQHTAHLAQIELKDCRVPAGNLIG--AEGAGYQQTMALLS 189

Query: 317 YLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   AI   +V   R +L  A+ YA+ R   G  +I+   +   +AD+A+ +  A     
Sbjct: 190 HGRVAIAAQAVGVARAALEAALRYAKDREAYGAPIINLQAVSFDLADMAMHVEIAHQYVL 249

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D     ++EA+ A++ A        +MA  V + A++  GG GY+++  + R+ 
Sbjct: 250 HAARLVDANVPCAKEASMAKLFA-------SEMAEKVCSTALQLHGGYGYLKDFPVERYC 302

Query: 435 RESPANSILLGS 446
           R+     I  G+
Sbjct: 303 RDVRVCKIYEGT 314


>gi|301054600|ref|YP_003792811.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|300376769|gb|ADK05673.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           biovar anthracis str. CI]
          Length = 395

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 109/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F +  P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMVPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   +  L
Sbjct: 202 ---NTIGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 253

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 254 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 313

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 314 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368


>gi|229070558|ref|ZP_04203798.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           F65185]
 gi|228712573|gb|EEL64508.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           F65185]
          Length = 382

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P ++R + ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKSPLHRYY 355


>gi|15600187|ref|NP_253681.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107104094|ref|ZP_01368012.1| hypothetical protein PaerPA_01005167 [Pseudomonas aeruginosa PACS2]
 gi|116053142|ref|YP_793463.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894091|ref|YP_002442960.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254238294|ref|ZP_04931617.1| hypothetical protein PACG_04425 [Pseudomonas aeruginosa C3719]
 gi|254244120|ref|ZP_04937442.1| hypothetical protein PA2G_04958 [Pseudomonas aeruginosa 2192]
 gi|296391837|ref|ZP_06881312.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313110027|ref|ZP_07795931.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9951279|gb|AAG08379.1|AE004912_5 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115588363|gb|ABJ14378.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170225|gb|EAZ55736.1| hypothetical protein PACG_04425 [Pseudomonas aeruginosa C3719]
 gi|126197498|gb|EAZ61561.1| hypothetical protein PA2G_04958 [Pseudomonas aeruginosa 2192]
 gi|218774319|emb|CAW30136.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310882433|gb|EFQ41027.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 402

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 27/270 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +   +  D  Y L+G K F++S   +DA ++ A +   +G   +
Sbjct: 132 MAITEPGCGSDSAAIRTTATQDGDH-YVLNGEKIFVTSGERADAVVVWATLNRNLGRAAI 190

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVEDM 312
              ++E G+P G+   RL+ K+G +++ T  + F++       LLG  +++V  G    M
Sbjct: 191 KSFVVEKGTP-GMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVM 249

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILID--QPVMKRAIADIAL----- 364
           +     D+    V+GM V +A+ A+   R      G   D  +P++  + A+  L     
Sbjct: 250 ET---FDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEA 306

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AA  L+ + A   D     S+EA+ A+  A        ++A  +  + +E  G  GY
Sbjct: 307 EWEAARLLTLKAAWMADNKLPNSKEASIAKAKA-------GRVANEITLKCVELAGALGY 359

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
            E+  + +  R+S    I  G+    +L V
Sbjct: 360 AEDELLEKWARDSKILDIFEGTQQIQLLIV 389


>gi|330982612|gb|EGH80715.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 339

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 34/233 (14%)

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIY 317
           G  N +    L +K+G +   +  L F +     G+L+G     LN     + + +I + 
Sbjct: 2   GQRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLNYMFQMMNEARIGVG 61

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------QPV-------------MKRA 358
           L +A++  SG   SL     YAR R    G L D      +PV              ++A
Sbjct: 62  LGAAMLGYSGYLYSL----EYARER--PQGRLPDSKSPDSKPVSIIEHADVRRMLLTQKA 115

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
             + A D+    +  F    + +    R        ++ P+ K W  +        A++ 
Sbjct: 116 YVEGAFDLCLYASRLFDDTQTGESEDDRKHAHELLDLLTPVVKSWPSEFCLKANELAIQV 175

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLF 469
           +GG GY  E  + ++YR++  N+I  G+     LD+L   L + G    +QL 
Sbjct: 176 LGGHGYTREYPVEQYYRDNRLNAIHEGTHGIQSLDLLGRKLAQNGGTGLKQLL 228


>gi|312383488|gb|EFR28556.1| hypothetical protein AND_03389 [Anopheles darlingi]
          Length = 1028

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+  + ++ ++  D  Y L+G K W  +  +++ + +LA+     +      
Sbjct: 158 VTEPGAGSDVNGVRTRAERKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKAPASKA 216

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 217 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFED---VRVPKENVLIGEGAGFKIAM 272

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ YA  R   G  +     +   +AD+A+ +  A 
Sbjct: 273 GTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAAHQAVSFMLADMAIGVETAR 332

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+ +  S         A I K +   +A  + ++A++  GG+G+  E  +
Sbjct: 333 LITMKSAYEVDQGRRNS-------YYASIAKCYASDIANKIASDAVQVFGGNGFNSEYPV 385

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 386 EKLMRDAKIYQIYEGT 401


>gi|325677324|ref|ZP_08156990.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552021|gb|EGD21717.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 404

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 46/271 (16%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
            P+ +  V     +TE     G+D +A+T++ +K   G + ++GHKWF++ +  +  FI+
Sbjct: 121 GPLARGEVRSAFAMTEPAPGAGSDPSALTTRAEKAPGG-WKINGHKWFITGADGAGFFIV 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV----ELEFSNTF 295
           +A+  G  G       FL P      S  G+   R+   I     A +    E+ F + F
Sbjct: 180 MARTSGAPGDRGGATMFLAP-----ASAPGI---RVGRHIDTLDRAMIGGHCEVFFEDLF 231

Query: 296 ---GFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                +LG ++       V  GP     ++ +L +A       R     A+ Y  RR   
Sbjct: 232 VPDDAVLGAVDEGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVDYVARRDGF 284

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L D  ++++ +AD  +DIAA  AL  R     D+  + S+  +       I K +  
Sbjct: 285 GSRLGDLGMVQQMVADNEIDIAATRALLTRACWELDQGGTASDSTS-------IAKTFGA 337

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    ++  +++  GG G   +  +AR  RE
Sbjct: 338 EAIFRIVDRSIQMCGGMGVSGDLPLARLSRE 368


>gi|295396580|ref|ZP_06806737.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970595|gb|EFG46513.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 627

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 58/310 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR-- 252
           + L+E   G+ +  +T++G+   DG Y L G K ++S     +S+  +  +LA+  G   
Sbjct: 164 MALSEPEVGSSLGDLTTRGEPQPDGTYRLFGTKMWISGGDQEISENIVALVLARHAGENA 223

Query: 253 ------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---------- 291
                 +  F VP+ + D     G  N +    L +K+GNR      LEF          
Sbjct: 224 QPGPKGLSLFAVPKFITDDNGDLGERNAITLVGLNHKMGNRGTTNTLLEFGDDKHRPVNA 283

Query: 292 -----SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                S   G+L+G        +  M  +  +++ +A  SV G R  L  A+ YA  R  
Sbjct: 284 QGEPTSGAVGYLIGREGEGLALMFHMMNEARVFVGAAAASV-GQRSHLT-AVRYAGERRQ 341

Query: 345 S--------GGILIDQPVMKRA-----------IADIALDIAAATALSFRLANSFDEAKS 385
                    GG ++  P+++ A            A++++ +    +     A + +  + 
Sbjct: 342 GRLPQDKGHGGPMV--PIVEHADVRRMLLASKSYAEVSVALVMFCSRLQDEAQTAEREED 399

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R   A    ++ PI K +  + A      A++  GG GY  + ++ + YR++  N I  G
Sbjct: 400 REAAALLLDVLTPIAKSFPSQYALKASDLAIQVHGGYGYTRDFTVEQLYRDNRLNPIHEG 459

Query: 446 SGNAMVLDVL 455
           +      D+L
Sbjct: 460 THGIQANDLL 469


>gi|239945037|ref|ZP_04696974.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|239991499|ref|ZP_04712163.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379]
 gi|291448494|ref|ZP_06587884.1| short/branched chain specific acyl-CoA dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
 gi|291351441|gb|EFE78345.1| short/branched chain specific acyl-CoA dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
          Length = 394

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 25/271 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           L+E++ G+D  A+T+  ++  +G Y L+G K W  ++  +D  ++ A  + G    F+VP
Sbjct: 136 LSEEQAGSDAFALTTVARQ-DEGGYLLTGRKRWTSNARNADLLLVFALADAGGPTAFVVP 194

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDM 312
                    G+       ++G R+ AT ++ F  T        G   G   V+   +   
Sbjct: 195 -----ADAPGVSLDDRVEQMGVRAAATSDVIFDGTPVRTAQRVGPPGGGQTVALSGLGLG 249

Query: 313 KILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           ++ I        ++G+ + +L  A  Y+R R   GG + D   +   +AD+A  +AAA A
Sbjct: 250 RLGI-----AAQMTGLAQGALDAATGYSRVREQFGGRIADHQGVAFPLADVASRLAAARA 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R  +       R  +      +A + KY   ++A    + A+E +GG+GY +   + 
Sbjct: 305 LLYRAVD----LHGRGTDPVELMRLAAMAKYVASEVAERAASVAVETLGGNGYTDAYPVE 360

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           R YR++ A  I  G+ N ++  + +++  G+
Sbjct: 361 RFYRDAKAGKIYEGTSNVLLRTIASIMIGGS 391


>gi|284992726|ref|YP_003411280.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284065971|gb|ADB76909.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 385

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 15/263 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+      I  GL+E+  G+D AA+ ++ +   D  + L+G K W  +S +S+ + ++A 
Sbjct: 118 PIAAGEAMISYGLSEREAGSDAAAMRTRARLDGDS-WVLNGTKAWITNSGISEWYTVMAV 176

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +          G      + K+G + + T EL F++    +  D  V    
Sbjct: 177 TDPEKGANGISAFAVHRDDPGFAVGPKERKMGIKGSPTCELYFTDC--TIPADRIVGEPG 234

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 L  LD    ++    V +A+     A+ Y R R   G  + +   ++  +AD+ 
Sbjct: 235 TGFKTALRTLDFTRPTIGAQAVGIAQGALDAAVAYVRERKQFGKAVAEFQGVQFMLADME 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  L +  A + ++           R+ A   K +   +A  V  +A++  GG+G
Sbjct: 295 MRIEAARHLVYVAAAAGEQGHPD-----VTRVSAS-AKAFASDVAMQVTTDAVQLFGGAG 348

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y ++  + R  R++    I  G+
Sbjct: 349 YTQDFPVERMMRDAKITQIYEGT 371


>gi|206970232|ref|ZP_03231185.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|296505439|ref|YP_003667139.1| acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|206734809|gb|EDZ51978.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|296326491|gb|ADH09419.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
          Length = 594

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----DYAGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 394 MYRDSRINRIFEGT 407


>gi|126432784|ref|YP_001068475.1| butyryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126232584|gb|ABN95984.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 385

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 28/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRV 253
           + LTE  GG+D+  +T+           ++G K ++S+      I L      A      
Sbjct: 121 MALTEPGGGSDLQNMTTTALPCEGDGLVVNGSKTWISNARRSGLIALLCKTDPAATPRHK 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           G  +V  L+E G+  GL   R   K+G +   + EL F +       +LG      G  +
Sbjct: 181 GISVV--LVEQGT-TGLSVSRDLPKLGYKGVESCELVFDDCRVPVTAILGG-EPGRGFAQ 236

Query: 311 DMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            MK L    I + S  + V+    +L +A+ YA+ R   G  +     +   +AD+A  +
Sbjct: 237 MMKGLETGRIQVASRALGVA--TAALEDALRYAQERESFGQPIWKHQSIGNYLADMATKL 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A  +D  +    EA  A++ A        ++A  +   A+   GG GY  
Sbjct: 295 TAARQLTRYAAERYDSGERADMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYST 347

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 348 EYDVERYFRDAPL--MIVGEGT 367


>gi|257456395|ref|ZP_05621591.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
 gi|257446055|gb|EEV21102.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
          Length = 390

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 57/300 (19%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKW 233
           F  E       P   +   IG  GLTE   GTD     +QGQ+ +   DG  + L+G K 
Sbjct: 101 FGTEEQKMKYVPDLASGKKIGAFGLTEPGAGTD-----AQGQQTTAVLDGDHWVLNGSKI 155

Query: 234 FLSSP-MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           F+++   +D FI++A        +GR    +   ++E G P G    + + K+G R ++T
Sbjct: 156 FITNAGYADVFIVIAVTGIVKDKKGRSVKEISAFIVERGFP-GFSIGKHEKKMGIRGSST 214

Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---------- 333
            EL F +       LLG        V+    +I    A+ ++ G R+ +A          
Sbjct: 215 CELVFEDCIVPKENLLG--------VQGRGFII----AMTTLDGGRIGIAAQALGIAEGA 262

Query: 334 --EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR----- 386
             E I Y + R   G  +  Q   +  IAD+A     A  L +  A     A        
Sbjct: 263 LEETIKYTKERVQFGKRISQQQNTQFQIADMAARTQGAQYLVYAAACKKQAANDNPNIRY 322

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+++A        ++A  V    ++  GG GY  +  I R  R++    I  G+
Sbjct: 323 SVEAAMAKLVA-------AEVASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEIYEGT 375


>gi|209867666|gb|ACI90354.1| hypothetical protein [Philodina roseola]
          Length = 636

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 38/274 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV---------- 249
           LTE   G+D A+I ++ +  +DG  Y L+G K W  +  ++  F + AQ           
Sbjct: 200 LTEPSAGSDAASIKTKAELSADGKFYVLNGSKIWTSNGGIASVFTVFAQTPVVDEKTGEK 259

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDL 302
           + ++  F+V R        GL     + K+G +++ T E+ F        N  G +    
Sbjct: 260 KNKITAFIVERKF-----GGLTNGPPEKKMGIKASNTTEIYFEDCKVPVENVLGGVGNGF 314

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            V+   + + +        +  +SG M++++ ++I +A+ R   G  +     ++  +  
Sbjct: 315 KVAMNILNNGRF-----GMVAGLSGTMKMAIRKSIDFAKNRRQFGRTIDTYGNVQEKLVR 369

Query: 362 IALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + +      +L+F LA + D      + EAA  +I A  + ++       V+ EA++  G
Sbjct: 370 MEMRQYVTESLAFLLAQNMDRGIPEYQCEAAIGKIFASESAWY-------VLDEAIQIHG 422

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G G++    + R  R+     I  G+ + + L V
Sbjct: 423 GMGFMRGTGLERVMRDLRIFRIFEGANDILRLFV 456


>gi|189202082|ref|XP_001937377.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984476|gb|EDU49964.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 553

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 108/269 (40%), Gaps = 25/269 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +   SD F    +  G  G 
Sbjct: 277 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGE-GM 335

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
             V  LL + S  G+  +++  + G  S+ T  + F        N  G +     V    
Sbjct: 336 NGVSLLLIERSAGGVSTRKMDCQ-GVWSSGTTYITFEDVKVPVENVIGKVNQGFKVIMTN 394

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               +I I     I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A
Sbjct: 395 FNHERIGI----IIQCLRFARVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIEA 450

Query: 369 A----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAMECIGGS 422
           +      L F+     D         A A + A  T    +C + A  +        GG 
Sbjct: 451 SYNWMENLIFQCEKMNDMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQ 510

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           G      + R YR+  A +I  GS   M+
Sbjct: 511 G----AKVERLYRDVRAYAIPGGSEEIML 535


>gi|228997983|ref|ZP_04157584.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus mycoides
           Rock3-17]
 gi|228761716|gb|EEM10661.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus mycoides
           Rock3-17]
          Length = 386

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 123/274 (44%), Gaps = 29/274 (10%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++ W P++FS   +   K  +   +       +  RGG        +G K     + ++G
Sbjct: 101 NRSWKPEMFSWFCEEVKKGALFNRAATEPKTGSPTRGGKPETLAVQKGDK-----WIING 155

Query: 231 HKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K F + +P+ D FI+ A +EGR  +G F++PR        G+  +   + +  R  A+ 
Sbjct: 156 RKTFTTMAPVLDYFIISASIEGRDEIGEFVIPR-----HEKGVLIEETWDSVAMRGTASH 210

Query: 288 ELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +L   N         D+  S    + +  L+++ +  + ++  + +   AI +A+    +
Sbjct: 211 DLVLQNVEIPHKFFTDVKGSQAKPKGIGWLLHIPACYLGIA--QAARNYAIDFAKAYQPN 268

Query: 346 GGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
               ++ P+     ++R + ++ L++  A    +++A  +DE +++  ++  A + A   
Sbjct: 269 S---LNHPISLLPNVRRLVGELELELLQARTFLYQVAKKYDEVENK--QSLQAELAA--A 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 322 KYIATNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|42782181|ref|NP_979428.1| acyl-CoA dehydrogenase, short-chain specific, putative [Bacillus
           cereus ATCC 10987]
 gi|42738106|gb|AAS42036.1| acyl-CoA dehydrogenase, short-chain specific, putative [Bacillus
           cereus ATCC 10987]
          Length = 382

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 106/237 (44%), Gaps = 25/237 (10%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPILDYFIISASIEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              +  G+  +   + +  R  A+ +L     E  N F     ++    G  + +  L++
Sbjct: 189 ---NTRGVSIEETWDSVAMRGTASHDLVLQNVEIENRF---FTNVLGGKGKQKGIGWLLH 242

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +  + ++    + A     + + +     +   P ++R + ++ L++  A    +++A
Sbjct: 243 IPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIA 302

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             +DEA    E+    ++     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 303 KKYDEA----EDKLSLQVELAAVKYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|319764995|ref|YP_004128932.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330827190|ref|YP_004390493.1| acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119556|gb|ADV02045.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312562|gb|AEB86977.1| Acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 410

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 106/261 (40%), Gaps = 19/261 (7%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG 251
           +  +     LTE   G+D+  +++  ++  D  Y ++G K F++    +D F+++ +   
Sbjct: 129 RGDIQAAFALTEPGAGSDVRGLSTTIRREGDD-YVINGRKKFITRGTTADWFMVVGRAAH 187

Query: 252 RVGCF---LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
              CF   LVPR        G        K+G        L+F +    +   LG     
Sbjct: 188 DPSCFIAVLVPR-----DAAGFAISPEVGKLGWAGVPISSLQFKDVRAQVSDRLGAEGDG 242

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +D  I   +  A M++     ++  A  Y   R + G  L +    +  +AD+   
Sbjct: 243 FDLAQDALIRARMGHASMALGRAIGAVEIAAAYMVDRKLFGKSLGEHQGAQWMVADMVTQ 302

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA AL    A  +D           A I A + K     +   V+ +A++  GG GY+
Sbjct: 303 LEAARALVHLAAEKYDSGDPD------AGIFASMAKLQATDLGMKVVTDALQLTGGRGYL 356

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R +R++  N I  GS
Sbjct: 357 QDFPLERFFRDAKLNQIGEGS 377


>gi|298248514|ref|ZP_06972319.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551173|gb|EFH85039.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 385

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------ 252
            G+TE   GTD   I++   +  D  Y +SG K ++S    SD  I+LA+   R      
Sbjct: 120 FGVTEPEAGTDTTQISTIAVRDGDH-YVISGQKIYISRVQHSDLMILLARTTPREQVRKK 178

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  FL+   L++    GL    ++  + N +N   +LEF+                F
Sbjct: 179 TEGLSVFLMD--LKEALEGGLTVTPIRTMLNNETN---KLEFNQVRVPVANRIGEEGRGF 233

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   V   R  + +A   A+ R V G  +     +
Sbjct: 234 RYILDGMNAE-------RILI----ASECVGDGRWFIEQATARAKERIVFGRPIGQNQGI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A     + AA  + +R A  FD+ K    EA  A+++A    +     A       
Sbjct: 283 QFPLAQAYAHVEAADLMRWRAATLFDQGKPCGAEANMAKLLAADASWEAANAA------- 335

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G   +  I R +RE+
Sbjct: 336 LQTFGGYGLTSDYDIERKFRET 357


>gi|229005534|ref|ZP_04163246.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus mycoides
           Rock1-4]
 gi|228755721|gb|EEM05054.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus mycoides
           Rock1-4]
          Length = 386

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 123/274 (44%), Gaps = 29/274 (10%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++ W P++FS   +   K  +   +       +  RGG        +G K     + ++G
Sbjct: 101 NRSWKPEMFSWFCEEVKKGALFNRAATEPKTGSPTRGGKPETLAVQKGDK-----WIING 155

Query: 231 HKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K F + +P+ D FI+ A +EGR  +G F++PR        G+  +   + +  R  A+ 
Sbjct: 156 RKTFTTMAPVLDYFIISASIEGRDEIGEFVIPR-----HEKGVLIEETWDSVAMRGTASH 210

Query: 288 ELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +L   N         D+  S    + +  L+++ +  + ++  + +   AI +A+    +
Sbjct: 211 DLVLQNVEIPHKFFTDVKGSQAKPKGIGWLLHIPACYLGIA--QAARNYAIDFAKAYQPN 268

Query: 346 GGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
               ++ P+     ++R + ++ L++  A    +++A  +DE +++  ++  A + A   
Sbjct: 269 S---LNHPISLLPNVRRLVGELELELLQARTFLYQVAKKYDEVENK--QSLQAELAA--A 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 322 KYIATNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|257439029|ref|ZP_05614784.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii A2-165]
 gi|257198519|gb|EEU96803.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii A2-165]
          Length = 389

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 55/318 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ----KI 221
           TP     + PK+ S E+              +G  GLTE   GTD     +QGQ    K 
Sbjct: 103 TPEQKAKYLPKLCSGEW--------------LGAFGLTEPGAGTD-----AQGQQTIAKE 143

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQR 274
            D  + L+G K F+++   +D FI++A  +      GR        ++E   P G    +
Sbjct: 144 EDDCWVLNGSKIFITNAGFADVFIVIAVTDRVLDKKGRPTKLCSAFIVERTDP-GFSVGK 202

Query: 275 LKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            ++K+G R ++T EL F +         G       ++   ++  +I I    A  ++  
Sbjct: 203 AEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQLAMATLDGGRIGI----ASQALGI 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NSFDEA 383
              +L E + Y + R   G  +      +  +A++   + AA  L +  A     + D A
Sbjct: 259 AEGALEETVAYVKERKQFGRSISAFQNTQFELAEMKARVEAAKYLVYAAALKKQQAMDGA 318

Query: 384 KSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           K R S EAA A+++A  T       A  V    ++  GG GY  +  I R  R++    I
Sbjct: 319 KVRYSVEAAQAKLIAART-------ASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+    ++ +   L K
Sbjct: 372 YEGTSEVQMMVISGALLK 389


>gi|171057898|ref|YP_001790247.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775343|gb|ACB33482.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 48/298 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P  +      + +TE   G+D   I +  +K   G + L+G K F+S    SD F++ A+
Sbjct: 113 PTVRGDRTCAIAITESGAGSDAQGIKTHAKKTDSG-WVLNGSKHFISDGEWSDFFLVSAR 171

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E  +  F+V +    G P G    + +  +G R    +EL F N              
Sbjct: 172 TGEKDISLFMVDK----GLP-GFTVGKDQKMMGLRGTPHLELFFDNV------------- 213

Query: 308 PVEDMKIL------IYLDSAIMSVS-----GMRVSLAEAIH-------YARRRHVSGGIL 349
           P+E + +L        +   ++ V      G R ++ +A H       YA  R   G  +
Sbjct: 214 PLEPVAMLGEQGQGFKMAMGVLGVVRLGQVGAR-AVGKACHVLELMTAYANERRQFGQRI 272

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D  ++++ +AD  ++I A+  +    A   D           AR    + K    +M  
Sbjct: 273 GDFQLVQQMLADSVMEINASRLMVLHTAAMIDAGID-------ARDWIAMVKVHASEMLG 325

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDVLNLLEKGTNLFE 466
            V+   ++  GG G+ +E  I R+YR++    I  G+      +   ++L++G  LF+
Sbjct: 326 RVVDRGVQLFGGMGFCKELPIERYYRDARVYRIFDGTSEIHRTVIARSVLKRGAALFD 383


>gi|167907008|ref|ZP_02494213.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           NCTC 13177]
          Length = 393

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +      Y L+G K W  + P  D  ++ A+ E   G   +
Sbjct: 129 LAMSEPNAGSDVVGMKLRAEP-RGARYVLNGTKMWITNGPDCDTLVVYAKTEPEGGARGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+LN   G V+ +   
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A+++      M   L   + Y   R   G  + +  +++  IAD+     A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D   S             I   +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDAGGSAHPRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|192290814|ref|YP_001991419.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284563|gb|ACF00944.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 384

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----G 254
           +G++E   G+D+A I +  +   D      G  W  +   +D   +L    EG V     
Sbjct: 123 IGVSEPGAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNTGEGPVHRNKS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              VP         G+   R  +K+G RS+ T ++ F    G  +   N      E+ K 
Sbjct: 183 LICVPM-----KTKGVTIARKLDKLGMRSSDTAQIYFD---GVRVPKRNRIG---EEGKG 231

Query: 315 LIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             Y         L  A   +     ++   I Y R R   G  L+D  V+   +A++  +
Sbjct: 232 FTYQMVQFQEERLWGAAACLKAHEKTIQNTIEYTRGRKAFGKPLLDNQVIHFRLAELQTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    +L +R A +    +  ++ A  A++ A        ++   +    ++  GG G++
Sbjct: 292 VELLRSLVYRAAEALVAGEDVTQLATMAKLKAG-------RLGREIPDACLQFWGGMGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            E  ++R YR+S   +I  G+   M+
Sbjct: 345 NETLVSRSYRDSRLTAIGGGADEVML 370


>gi|41409287|ref|NP_962123.1| FadE23 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398107|gb|AAS05737.1| FadE23 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 401

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L + +GR  +
Sbjct: 131 MAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSKGRPAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL+ K+G + + T  + F N       LLG+  +  G   
Sbjct: 190 KSFIVPR-----DHPGVTVERLEKKLGIKGSDTAAVRFDNVRIPKENLLGNPEIEEGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQP--VMKRAIAD---I 362
              ++   D+    V+ M V +A A +   R+     G+ I  D+P  V   A A+   +
Sbjct: 245 S-GVMETFDNTRPIVAAMAVGVARAALEEIRKILTDAGVEISYDKPAHVQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  +A  LS R A   D     S+EA+       ++K    +MA  V  + +E  G +
Sbjct: 304 EADWESAYLLSLRAAWQADNEIPNSKEAS-------MSKAKAGRMATDVTLKTVELAGTA 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQSLLEKWARDSKILDIFEGT 380


>gi|332291244|ref|YP_004429853.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169330|gb|AEE18585.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 380

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  +  +      D  Y ++G K W  +   SD ++++AQ +   G      
Sbjct: 125 LSEPEAGSDATSQATTAIDKGDH-YVINGTKNWITNGGRSDVYLVIAQTDREKGHRGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V + +E     G      ++K+G R + T  L+F++             FGF      
Sbjct: 184 FIVEKGME-----GFEVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +S G        I + +  + ++     LA  + Y++ R   G  + +   +   +AD+ 
Sbjct: 239 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I AA  L  + A   D+  +    +A A++       +  K+A     EA++  GG+G
Sbjct: 290 VEIEAARHLVMKAAWDKDQGNNYDMSSAMAKL-------YASKVAMEQSVEAVQIHGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           +++E  + R  R++    I  G+
Sbjct: 343 FVKEYHVERLMRDAKITQIYEGT 365


>gi|327402488|ref|YP_004343326.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327317996|gb|AEA42488.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 451

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 119/263 (45%), Gaps = 32/263 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML 246
           P  K    IG  GLTE   G+ +A  +T + ++I +  + L+G K W  ++  +D  I+ 
Sbjct: 182 PELKNLRKIGAFGLTEPEVGSGVAGGLTMKAKRIGNS-WTLNGQKKWIGNATFADVIIIW 240

Query: 247 AQVEG--RVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVE----LEFSNTFG 296
           A+ E   +V  FLV    P L  +   + +  + ++N I   ++  VE    L+ +N+F 
Sbjct: 241 AEDEEDHQVKGFLVRKDTPGLAVEKMEDKMALRIVQNGIITLTDCLVEEVDRLQKANSFK 300

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                L ++   V           A ++V   R +   A+ Y R R   G  +    +++
Sbjct: 301 DTANVLRMTRAGV-----------AWLAVGCARGAYESALKYTRERKQFGKPIASFQLIQ 349

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             + ++  ++ A   +  RL+   D+ +   E A+ A++       +C      ++++A 
Sbjct: 350 NHLVEMLTNLTAMQTMVARLSELQDQNELTDEHASLAKV-------FCSLRTRDIVSKAR 402

Query: 417 ECIGGSGYIEERSIARHYRESPA 439
           E +GG+G + E  +AR   ++ A
Sbjct: 403 EVMGGNGILLEYDVARFVADAEA 425


>gi|256045808|ref|ZP_05448686.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 382

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVS 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAMAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|256396118|ref|YP_003117682.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362344|gb|ACU75841.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 382

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 126/309 (40%), Gaps = 30/309 (9%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV S   V  M +  VH+  +P+   R + P     M + +V     L+E   G+D A I
Sbjct: 85  SVRSLLTVHTMASWAVHRWGSPEQRER-WLPA----MSRGAVLGAFCLSEPGAGSDTAGI 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +     + G       +W  +   +D  ++ A+V   +  FLVP         G+    
Sbjct: 140 ATTAVPHAGGWRLNGMKRWITNGQRADLLLVFARVGTGIAAFLVPH-----DTPGVSMLP 194

Query: 275 LKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +   +G R++   E+ F +   G   LLG    + G    M +   LD    SV+   V 
Sbjct: 195 IDGMLGTRASMLAEISFQDVDLGPDALLGPSGFTAG----MVLTGTLDLGRYSVATGSVG 250

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + +A       Y+  R V G  L + P ++  ++D+  D  AA  L        +EA   
Sbjct: 251 IIQACVDACAGYSAARKVGGAPLSELPQIRAKLSDMVTDARAARLLC-------EEAGRL 303

Query: 387 SEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +    + IMA  I KY+    A    AEA++  G +G   +  + R YR++    I+ G
Sbjct: 304 KDAGEPSTIMATWIAKYFASTAAARHAAEAVQVHGANGCSPDYPVERFYRDAKIMEIIEG 363

Query: 446 SGNAMVLDV 454
           S     L +
Sbjct: 364 STEVQQLTI 372


>gi|297156248|gb|ADI05960.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 403

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YA++RH  G  +     ++  +A++A  + AA A+    A   D  +    EA  A 
Sbjct: 279 GVAYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGRRNDLEAGMA- 337

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY   +    V+ +A    GG G+ +E  I R YRE+P   +L+G G A +  +
Sbjct: 338 ------KYLASEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKM 389

Query: 455 L---NLLEK 460
           +    LLE+
Sbjct: 390 IIGRRLLEE 398


>gi|225027698|ref|ZP_03716890.1| hypothetical protein EUBHAL_01957 [Eubacterium hallii DSM 3353]
 gi|224955012|gb|EEG36221.1| hypothetical protein EUBHAL_01957 [Eubacterium hallii DSM 3353]
          Length = 380

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 36/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD +   +      D  + L+G K F+++  ++D F +LA  +   G   +
Sbjct: 123 FALTEPNAGTDASGQQTVAVDAGDH-WVLNGSKIFITNAGVADVFFVLAMTDKSQGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    + ++K+G R+++T EL F +       L+G+L             
Sbjct: 182 SAFIVEKGYKGFSIGKHEDKLGIRASSTCELIFEDCIVPKENLVGELGKG---------- 231

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+M++ G RV +A            E   Y   R   G  +      +  +A + 
Sbjct: 232 --FKYAMMTLDGGRVGIAAQALGIAEGALEETTKYITERKQFGRRISQFQNTQFEMAQMR 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L ++ A + D+ +  S +AA A+++A        + A  V    ++  GG G
Sbjct: 290 AQTEAAKLLVYQAACAKDDHEPFSHKAAMAKLVA-------ARNAMDVTTRCLQLYGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y ++  I R  R++    I  G+    ++
Sbjct: 343 YTKDYPIERMMRDAKITEIYEGTSEVQMM 371


>gi|17544993|ref|NP_518395.1| acyl CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427283|emb|CAD13802.1| probable acyl coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 376

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 32/274 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           AP+ +  +     LTE   G+D AA+ +   +  DG  + L+G K F++S   +D  I++
Sbjct: 110 APLARGEMLGAFCLTEPHVGSDAAALRTTATR--DGEHWVLNGVKQFITSGKHADVAIVM 167

Query: 247 AQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
           A  +   G      FLVP      +  G    RL++K+G  S+ T ++   +       L
Sbjct: 168 AVTDKAAGKRGISAFLVPT-----ATPGYIVARLEDKLGQHSSDTAQIVLEDCRIPADCL 222

Query: 299 LGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           LG       ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     
Sbjct: 223 LGSAGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQA 278

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++A  I  A  + +  A+  D  ++  +EAA A++ A        +MA  V ++
Sbjct: 279 VQFRLAEMATRIDVARQMVWHAASLKDAGRACLKEAAMAKLNAS-------EMAERVCSD 331

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++  GG GY+ +  + R YR+     I  G+ +
Sbjct: 332 AIQVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|312962234|ref|ZP_07776726.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311283571|gb|EFQ62160.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 385

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 22/268 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G++E   G+D+A + +  +K  DG  Y ++G K W  +SP +D   +LA          
Sbjct: 123 IGVSETGAGSDVAGLKTHARK--DGADYVINGSKMWITNSPSADFICLLANTSDDKPHIN 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
              ++   +  G+       K+G  S+ T ++ F        N  G       +     +
Sbjct: 181 KSLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFDEVRIPQRNRIGHEGAGFMMQMLQFQ 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + ++      A   + G+   +   I Y + R   G  LID  V+   +A+++ +I    
Sbjct: 241 EERLF----GAANMIKGLEHCIDSTIAYCKERRTFGKALIDNQVIHFRLAELSTEIECLR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL ++    + + +  +  A+ A++ A        ++   V    ++  GG G++ +  +
Sbjct: 297 ALVYQATEQYIKGQDVTRLASMAKLKAG-------RLGRDVSDSCLQYWGGMGFMWDNPV 349

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           AR YR+    SI  G+   M+  +  L+
Sbjct: 350 ARAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|307178143|gb|EFN66951.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Camponotus floridanus]
          Length = 423

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 40/293 (13%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG 224
           T  + HK + PK+ S E+              IG L ++E   G+D+ ++  + +K +D 
Sbjct: 142 TKEQKHK-YLPKLCSGEH--------------IGALAMSEPGYGSDVTSMKLRAEKKND- 185

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            Y L+G+K W  + P +D  I+ A+        +  +  F+V    E     G    +  
Sbjct: 186 YYILNGNKFWITNGPDADILIVYARTNPNADKPQHGITAFIVESATE-----GFSTAQKL 240

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R + T EL F +       +LG++N     +     L  L  A   V   + S  
Sbjct: 241 DKLGMRGSNTCELIFEDCKIPAANVLGEVNKGVYVLLSGLDLERLILAAGPVGVHQASCD 300

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R      L    +++  IAD+ + + A+ +  + +A   D   +  ++ A  
Sbjct: 301 IAFEYAHSRKQFDQYLAQFQLIQGKIADMYMTLTASRSYLYSVARFCDAGHTNRKDCAAV 360

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       +C + A      AM+ +GG+GYI +    R  R++    +  G+
Sbjct: 361 LL-------FCTENAVKATMNAMQILGGNGYINDYVTGRLLRDAKLYDVGAGT 406


>gi|229591322|ref|YP_002873441.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363188|emb|CAY50246.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 390

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +  +++ A+ +   G   +
Sbjct: 131 LAMSEPNAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDASTYVIYAKTDLEKGPHGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 190 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVQVPQENILGVLNGGVKV------- 242

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG    + +A     + Y   R   G  + +  +++  +AD+   +
Sbjct: 243 --LMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + +  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 301 NASRAYLYAVAQACERGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYIN 353

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 354 EFPAGRLLRDAKLYEIGAGT 373


>gi|228955269|ref|ZP_04117277.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228961248|ref|ZP_04122868.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229049694|ref|ZP_04194251.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH676]
 gi|229072492|ref|ZP_04205694.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus F65185]
 gi|229082251|ref|ZP_04214714.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-2]
 gi|229112447|ref|ZP_04241985.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-15]
 gi|229147550|ref|ZP_04275897.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST24]
 gi|229181300|ref|ZP_04308630.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 172560W]
 gi|228602193|gb|EEK59684.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 172560W]
 gi|228635976|gb|EEK92459.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST24]
 gi|228671095|gb|EEL26401.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-15]
 gi|228700683|gb|EEL53206.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-2]
 gi|228710468|gb|EEL62441.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus F65185]
 gi|228722607|gb|EEL73995.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH676]
 gi|228798454|gb|EEM45447.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228804402|gb|EEM51013.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 600

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----DYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|197286484|ref|YP_002152356.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis HI4320]
 gi|227357557|ref|ZP_03841910.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis ATCC 29906]
 gi|29427813|sp|Q8GB20|CAIA_PROSL RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699669|sp|B4EY23|CAIA_PROMH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|27528359|emb|CAD48579.1| crotonobetainyl-CoA reductase [Proteus sp. LE138]
 gi|194683971|emb|CAR45233.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis HI4320]
 gi|227162267|gb|EEI47271.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis ATCC 29906]
          Length = 380

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I+ +++        +   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMSRDAASPDKPIFTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F N        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDNVELEEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNSMRNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G   E  IAR 
Sbjct: 298 YETAWKSDNGLITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGEHRIARF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|326331602|ref|ZP_08197892.1| putative glutaryl-CoA dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
 gi|325950858|gb|EGD42908.1| putative glutaryl-CoA dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
          Length = 393

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 24/254 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++ A + ++ +K  D  + LSG K W  ++P++D  ++ A
Sbjct: 122 PRMAAGEAIGCFGLTEPDFGSNPAGMRTRARKDGDD-WVLSGTKMWITNAPVADVAVVWA 180

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLL 299
           Q  EG  G  +   ++   +P G     +K K+  R++ T       V L  S  F  + 
Sbjct: 181 QTDEGENGKGIRGFVVPTDTP-GFSAPVIKQKLSLRASVTGEIVLDSVRLPASAAFPEVR 239

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G L      + + +  I   +    V   R  L  AI YA  R +    L    + +  +
Sbjct: 240 G-LKGPLSCLNEARFGIVFGA----VGAARDCLESAIAYAASREIYDKPLSGYQITQTKL 294

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ L++  A  L+  L    DE   RSE+ +  ++          + A A+  E    +
Sbjct: 295 ADMTLELGKAMLLALHLGRLKDEGTLRSEQISLGKLNN-------VREAIAIARECRTIL 347

Query: 420 GGSGYIEERSIARH 433
             +G   E  I RH
Sbjct: 348 AAAGVTLEYPILRH 361


>gi|302415341|ref|XP_003005502.1| glutaryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261354918|gb|EEY17346.1| glutaryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 431

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 29/248 (11%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y LSG K W  +SP++D  ++ A+++  G++ 
Sbjct: 167 FGLTEPNHGSDPGSMETVARPHPSKKGYYSLSGAKTWITNSPVADVLLVWAKLQETGKIR 226

Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNAT--VELE-----FSNTFGFLLGDLNVST 306
            FLV R      P G L    +K+K G R++ T  ++LE       N F  + G      
Sbjct: 227 GFLVER---SKCPAGTLETPPIKDKNGLRASITGMIQLEECPVPHENMFPEVEG----LR 279

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALD 365
           GP   +    Y   A+  +  +   +A A  YA  R+   G  L    ++++ +AD + D
Sbjct: 280 GPFSCLNSARY-GIALGVMGALEDCIARARTYALERKQFKGNPLARYQLVQKKLADASTD 338

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A  T  + ++    DE K+  +       M  + K   C  A        E  GG+   
Sbjct: 339 AAYGTLAAIQVGRLKDEGKATPD-------MISMVKRQNCDRALQNARVLQEIFGGNAVS 391

Query: 426 EERSIARH 433
           +E +I RH
Sbjct: 392 DEYAIGRH 399


>gi|228991867|ref|ZP_04151803.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           pseudomycoides DSM 12442]
 gi|228767596|gb|EEM16223.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           pseudomycoides DSM 12442]
          Length = 386

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 123/274 (44%), Gaps = 29/274 (10%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++ W P++FS   +   K  +   +       +  RGG        +G K     + ++G
Sbjct: 101 NRSWKPEMFSWFCEEVKKGALFNRAATEPKTGSPTRGGKPETLAVQKGDK-----WIING 155

Query: 231 HKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K F + +P+ D FI+ A +EGR  +G F++PR        G+  +   + +  R  A+ 
Sbjct: 156 RKTFTTMAPVLDYFIISASIEGRDEIGEFVIPR-----HEKGVLIEETWDSVAMRGTASH 210

Query: 288 ELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +L   N         D+  S    + +  L+++ +  + ++  + +   AI +A+    +
Sbjct: 211 DLVLQNVEIPHKFFTDVKGSQAKPKGIGWLLHIPACYLGIA--QAARNYAIDFAKAYQPN 268

Query: 346 GGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
               ++ P+     ++R + ++ L++  A    +++A  +DE +++  ++  A + A   
Sbjct: 269 S---LNHPISLLPNVRRLVGELELELLQARTFLYQVAKKYDEVENK--QSLQAELAA--A 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 322 KYIATNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|186472899|ref|YP_001860241.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195231|gb|ACC73195.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 401

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 22/253 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA++ Q +   D  Y + G K W  +  ++D +++ A+     G   +  
Sbjct: 137 LSEPDAGSDVAAMSLQARAEGD-CYVIDGDKTWISNGGIADFYVVFARTGEAPGARGISA 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKI----- 314
            + D    GL      + I     A +  + +      +LG       P E  KI     
Sbjct: 196 FIVDADTPGLQIAERIDVIAPHPLARLHFDSARVPRSQMLG------APGEGFKIAMRTL 249

Query: 315 -LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +     A  S+   R +L E +  A  R + G  L D  + +  +A +AL I ++  L 
Sbjct: 250 DVFRTSVAAASLGFARRALQEGLARAASRKMFGQTLGDFQLTQTKLAQMALTIDSSALLV 309

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ ++ + EAA A       K+   + A  VI  A++  GG G     ++ R 
Sbjct: 310 YRAAWLRDQGENVTREAAMA-------KWHASEGAQQVIDAAVQLWGGMGVQSGTTVERL 362

Query: 434 YRESPANSILLGS 446
           YRE  A  I  G+
Sbjct: 363 YREIRALRIYEGA 375


>gi|237786205|ref|YP_002906910.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759117|gb|ACR18367.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 402

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 48/301 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++   SD  ++ A V+   GR  +
Sbjct: 132 MAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGERSDHVVVWASVDKSKGRAAI 190

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VP+     S +G   +RL++K+G +++ T  L   N       LLG   VST    
Sbjct: 191 KSFVVPK-----SADGFTVERLEHKLGIKASDTAVLRLDNVRVPKENLLGSPEVST-KKG 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIA-----DI 362
               +   D+    V+ M V  A  A+   R      G +I  D+P   ++ A     D+
Sbjct: 245 FAGAMATFDNTRPLVAAMAVGCARGALEKLREVLEDAGEVIDYDKPKYAQSAAVAEYLDL 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ R A   D  K  ++EA+ A+  A        ++   V  +A+E  G  
Sbjct: 305 ESDWEAAYLLTLRAAWMADNKKPNTKEASIAKAKA-------GRVGTHVTLKAVELAGPW 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY E   + +  R+S             +LD+     +GT   +QL     ++LG S K+
Sbjct: 358 GYSERELLEKWGRDSK------------ILDIF----EGTQQIQQLI-VARRELGLSSKE 400

Query: 483 V 483
           +
Sbjct: 401 L 401


>gi|47564232|ref|ZP_00235277.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|47558384|gb|EAL16707.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus cereus G9241]
          Length = 382

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|323170009|gb|EFZ55665.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           LT-68]
          Length = 383

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVFLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQKKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|319760749|ref|YP_004124686.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822669|ref|YP_004385972.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115310|gb|ADU97798.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308041|gb|AEB82456.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 22/273 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P     + + LG++E   G+D+A++ +  +K  D  Y ++G K W  +   +D   +LA 
Sbjct: 112 PTVAGDMVVCLGVSESGAGSDVASLKTTARKDGDD-YVINGSKMWITNGTQADWMCLLAN 170

Query: 249 V-EG---RVGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
             EG   R    +   L E+G    G+  Q++K K+G  ++ T ++ F        + +G
Sbjct: 171 TSEGDVHRNKSLICLPLRENGKLRPGISMQKIK-KVGMWASDTAQVFFDEVRVPQRYRIG 229

Query: 301 DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +     G    M+      L  A   V+ +   + E I Y R+R   G  ++D   +   
Sbjct: 230 E--EGKGFTYQMRQFQEERLSGATRRVTALSNVIDETIAYTRQRKAFGRSILDNQAVHFR 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  ++    +L +R A         +E A+ A++ A        ++   V    ++ 
Sbjct: 288 LAELKTEVEMLRSLIYRAAQVHMGGGDMTELASMAKLKAG-------RLCREVTDSCLQY 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G+  E  ++R +R+    SI  G+   M+
Sbjct: 341 WGGMGFTWENKVSRAWRDLRLISIGGGADEIML 373


>gi|182438275|ref|YP_001825994.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466791|dbj|BAG21311.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 388

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 122 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEFYTVMAV 180

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+ F N       ++G+    
Sbjct: 181 TDPAKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEG-- 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 239 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   +           K +   +A  V  +A++ +G
Sbjct: 296 DMAMKLEAARQLTYSAA-----AKSERVDGDLT-FFGAAAKCFASDVAMEVTTDAVQLLG 349

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 350 GYGYTRDYPVERMMRDAKITQIYEGT 375


>gi|16768578|gb|AAL28508.1| GM09085p [Drosophila melanogaster]
          Length = 333

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 74  LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMKHKGITA 132

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310
           FL P+ +      GL   + ++K+G R+ +T +L        +L D++V    V     +
Sbjct: 133 FLTPKDVP-----GLSIAKKESKMGMRATSTCQL--------VLEDVHVPRSRVLGAAGD 179

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A 
Sbjct: 180 GFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRMAFGKQLARLQLIQQKLADMAT 239

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  L++R A   D     ++EAA A++ A  +  +C         + ++ +GG GY
Sbjct: 240 RVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAH-------QCIQILGGMGY 292

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +     +YR +    I  G+     + + N
Sbjct: 293 TTDLPAELYYRNARVTEIYEGTSEIQRIVIAN 324


>gi|302186185|ref|ZP_07262858.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           642]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/311 (20%), Positives = 135/311 (43%), Gaps = 28/311 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   +G L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHVGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ +       +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-LDS 320
               G       +K+G R + T EL F +       LLG L+      + +++L+  LD 
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGMLD------DGVRVLMSGLDY 246

Query: 321 AIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +SG     M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + 
Sbjct: 247 ERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYA 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI E    R  R
Sbjct: 307 VAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGRLLR 359

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 360 DAKLYEIGAGT 370


>gi|294851792|ref|ZP_06792465.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294820381|gb|EFG37380.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 592

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 40/287 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250
           + LTE + G+D+ A+ ++ ++  DG Y + G K F++    D       ++LA++     
Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTNNIVHLVLARLPDAPA 219

Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF-------- 295
           G  G   FLVP+ L  EDGS    N L    L++K+G  ++ T  + + + F        
Sbjct: 220 GTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQGA 279

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------ 348
            G+L+G+ N     +  M     L   I  V     +  +A+ YA+ R     +      
Sbjct: 280 VGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPKQ 339

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAY----ARIMAPI 399
               +I+ P ++R +  +      A ++++  A++ D +  + S +A +    A ++ P+
Sbjct: 340 GMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDSADAQFWSDRAGLLTPL 399

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K +       V +  ++  GG G+IEE   A+  R++    I  G+
Sbjct: 400 AKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGT 446


>gi|228942175|ref|ZP_04104715.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975104|ref|ZP_04135663.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981744|ref|ZP_04142039.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           Bt407]
 gi|228777856|gb|EEM26128.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           Bt407]
 gi|228784625|gb|EEM32645.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817509|gb|EEM63594.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 600

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213
           ++T  + V + + P V       +F  E       P+  T   +    LTE   G+D   
Sbjct: 115 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 167

Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270
             +  +  ++G  Y L+G K W  +S  +D F++ A+++G     F+V +        G+
Sbjct: 168 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEK-----EYAGV 222

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325
                + K+G + ++T  L   +       LLG+  +  G +    IL        + +V
Sbjct: 223 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  +  YA +R      +   P+++  +A++A    AA +  +R    F+   S
Sbjct: 281 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 340

Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             SEE            A YA I   + K +  ++    + E ++  GG G++ E  I R
Sbjct: 341 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 399

Query: 433 HYRESPANSILLGS 446
            YR+S  N I  G+
Sbjct: 400 MYRDSRINRIFEGT 413


>gi|206559699|ref|YP_002230463.1| putative Acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198035740|emb|CAR51631.1| putative Acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 609

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 125/315 (39%), Gaps = 65/315 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
           L+E + G+ ++ I ++     D      Y L+G+K ++S    +       ++LA++   
Sbjct: 163 LSEPQAGSSLSDIATRADFECDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222

Query: 250 EGR-------VGCFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEF----- 291
            GR       +  F+VP+ L   DG  NG    +    L +K+G R      L F     
Sbjct: 223 HGRLQPGTRGISLFIVPKFLTGADGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282

Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340
                 +   G+L+G  N     +  M     ++ A + V    V+L       A+ YAR
Sbjct: 283 YRPAGRAGAIGYLVGQPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337

Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     +             ++D P ++R +      +    AL    A   DEA++  
Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALILYCAKLVDEARAHD 397

Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + A  A       I+ PI K W  +   A    A++  GG GY  + ++ R YR++  N 
Sbjct: 398 DAAVRADAARLLDILTPIAKSWPSQWCVAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     LD+L 
Sbjct: 458 IHEGTHGIQALDLLG 472


>gi|297158280|gb|ADI07992.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 386

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 49/299 (16%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    + W P              +   S  +  G+TE   G++
Sbjct: 87  VVSPAICG-TVIARFGTEEQKRAWLPG-------------LADGSKTMAFGITEPDAGSN 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG----CFLVPRLLED 264
              IT+  ++  DG + L+G K F+S   +SDA +++ + E  R G    C  +   +E 
Sbjct: 133 SHRITTTARRTPDGGWLLTGRKVFISGVDISDATLIVGRTEDARTGKLKPCLFI---VER 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYL--- 318
           G+P G  Y+ +  ++     A  E +F      +L D+ +    +   ED  +L      
Sbjct: 190 GAP-GFSYRHIPMEL-----AAAEKQFE----VVLDDVPLPAEALVGDEDAGLLQLFAGL 239

Query: 319 -DSAIMSVS---GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               IM+ +   GM R +LA+A+ YAR R V    +     +   +A   +++  A  + 
Sbjct: 240 NPERIMTAAFALGMGRYALAKAVEYARVRQVWREPIGAHQAVAHPLAQAHIEVELARLMM 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + A+ +D     + + A A   A + KY   + A   + +A+  +GG+G   E  +A+
Sbjct: 300 AKAAHLYD-----AGDDAGAGEAANMAKYAAGEAAVRAVDQAVHTLGGNGLTAEYGLAK 353


>gi|291393372|ref|XP_002713213.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 9
           [Oryctolagus cuniculus]
          Length = 621

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 133/310 (42%), Gaps = 34/310 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D   Y L+G K W  +  ++  F + A+ E         
Sbjct: 180 LTEPASGSDAASIRARAVLSEDKKHYILNGSKVWITNGGLASIFTVFAKTEIADPDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R        G+   + ++K+G R + T E+ F NT      +LGD  V  G
Sbjct: 240 DKITAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTKVPVENVLGD--VGGG 292

Query: 308 PVEDMKILIYLDSAIMS-VSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ S V+GM   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSTVAGMLKRLIEMTAEYACTRKQFNKNLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++S+  A   D+      S EAA  ++ +    + C       I+EA++ +GGSG
Sbjct: 353 AYVMESMSYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------ISEALQILGGSG 405

Query: 424 YIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           Y+++    R  R+S    I  G+     M + +  L   G  L  ++      ++ +  +
Sbjct: 406 YMKDYPYERMLRDSRILLIFEGTNEILRMYIALTGLQHAGRTLTARIKELKRGNMNTVME 465

Query: 482 KVITILRDSI 491
            +   LRDS+
Sbjct: 466 TIGRRLRDSL 475


>gi|289423447|ref|ZP_06425251.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156205|gb|EFD04866.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 380

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 34/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-F 256
           LTE   G+D  A  ++ + I D     Y ++G K F+S    +D  ++ A  +   G   
Sbjct: 124 LTEPNAGSDAGA--AKTKAILDPETNEYVINGTKCFISGGSRADVVLLFALTQPEKGLRG 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +   ++E G+P G    ++++K+G   + T EL F +     +   N+     +  KI +
Sbjct: 182 MSAIIVEKGTP-GFSIGKIESKMGLNGSETAELIFEDC---RVPAANLLGKEGQGFKIAM 237

Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIALD 365
             LD A +      + +AE     ++ Y + R     +   +PV     ++  IAD+A  
Sbjct: 238 QALDGARIGTGAQSIGVAEGAIDLSVKYTKER-----VQFGKPVGALQGIQWYIADMATK 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +  A   D  K+ ++EAA  ++ A     +   +       A++  GG GY+
Sbjct: 293 TEAAKTLVYYAAYLKDAGKNHTKEAAMCKLNAAENARYVTNL-------ALQIHGGYGYM 345

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  + R YR++    I  G+
Sbjct: 346 KDYPLERMYRDAKITEIYEGT 366


>gi|330822780|ref|YP_004386083.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|329308152|gb|AEB82567.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 384

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 16/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
           + +TE   G+D+ ++ +  + + D     Y L+G K F+++ + S+  I++A+    +G 
Sbjct: 126 IAMTEPGAGSDLKSVRTTARLVKDSEGDHYILNGSKTFITNGINSEIVIVVAKTNPELGA 185

Query: 256 FLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             V  ++ E+G+P G    R   KIG  +  T EL F N     G LLG+ N+    +  
Sbjct: 186 KGVSLIVVEEGTP-GFSKGRKLEKIGLMAQDTSELFFDNVKVPVGNLLGEENMGFKYLMK 244

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+ + + +   L + + Y R R   G  + +         +    +A A A
Sbjct: 245 ELAQERLVVAVRAAASIEAFLQKTVDYTRERKAFGQTVFE-------FQNTRFKLAEAKA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +  L    D+      +       A + K     +   ++ E ++  GG GY+ E  + 
Sbjct: 298 QATMLRVFVDDCMRLHMQRQLTPERAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQVG 357

Query: 432 RHYRESPANSILLGSGNAM 450
           R + ++    I  GS   M
Sbjct: 358 RAWTDARIGRIYGGSDEIM 376


>gi|330919411|ref|XP_003298605.1| hypothetical protein PTT_09367 [Pyrenophora teres f. teres 0-1]
 gi|311328134|gb|EFQ93314.1| hypothetical protein PTT_09367 [Pyrenophora teres f. teres 0-1]
          Length = 443

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 32/181 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVE--GRV 253
           I + +TE   G+D+A IT+  +K  DG  Y ++G  KW  +   SD   M  +    G  
Sbjct: 157 ICIAITEPEAGSDVANITTTAEKTLDGKHYIINGSKKWITNGIWSDYATMAVRTSGPGPT 216

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
           G  +V   L+ G P G+  +R+K   GN S+ T  +E        L D+ V   PVE+  
Sbjct: 217 GLSMVVVPLK-GYP-GVSMRRIKVG-GNISSGTTFIE--------LDDVKV---PVENLI 262

Query: 312 ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                 MK ++       L  AI +    RV+L+ A+ Y  +R   G  L++QPV++  +
Sbjct: 263 GEEGMGMKYIMTNFNHERLSIAIGATRQARVALSAAVEYVIKREAFGKPLVEQPVVRHRL 322

Query: 360 A 360
           A
Sbjct: 323 A 323


>gi|226308493|ref|YP_002768453.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229488424|ref|ZP_04382290.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|226187610|dbj|BAH35714.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229323928|gb|EEN89683.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 385

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 130 LSEREAGSDAASMRTRAKADGDD-WILNGSKCWITNGGKSTWYTVMAVTDPDKGANGISS 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 189 FMVHKDDEGFVVGPKEKKLGIKGSPTAELYFENC--RIPGDRIIGEPGTGFKTALETLDH 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 247 TRPTIGAQAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 307 SA-----ARAERGEKNLGFISAA-AKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMR 360

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 361 DAKITQIYEGT 371


>gi|271962887|ref|YP_003337083.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270506062|gb|ACZ84340.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 122/275 (44%), Gaps = 32/275 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           AP+ +        L+E   G+D AA+ ++   ++DG  Y L+G K W  ++ +S+ + ++
Sbjct: 114 APVARGEAMFSYALSEAEAGSDAAAMKTRA--VADGDHYVLNGAKMWITNAGVSEYYTVM 171

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A  E   G   +   + + S  G+ +   + K+G + + T ++   N       ++G+  
Sbjct: 172 AVTEPGAGARGISAFVVEKSDEGVSFGPKERKLGIKGSPTRQVILENVRIPASRMIGE-- 229

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
               P    K  L  LD   ++++   + +A+     A+ Y + R   G  + +   ++ 
Sbjct: 230 ----PGTGFKTALATLDHTRITIAAQALGIAQGALDYAVGYVKERKQFGKAVAEFQGVQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA------V 411
            IAD+A+ + AA  L++        A ++SE A +      +T +       A      +
Sbjct: 286 MIADMAMKLEAARQLTY-------AAAAKSELAMHGEPQKDLTFFSSAAKCAASDAAMEI 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 339 TTDAVQLLGGYGYTGDYPVERMMRDAKITQIYEGT 373


>gi|153009201|ref|YP_001370416.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561089|gb|ABS14587.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 385

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  +D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALRTRATRDGDH-YILNGSKQFISGAGATDVYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMK 313
           ++      GL +   + K+G  +  T  + F N       LLG+      ++   ++  +
Sbjct: 188 IVVPKDAPGLSFGANEFKMGWNAQPTRTVIFDNCRVPAENLLGEEGTGFRIAMAGLDGGR 247

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L +++ Y  +R   G  +     ++  +AD+  +++A+  L 
Sbjct: 248 LNI----AACSLGGAQSALDKSLEYCSQRKAFGQTIDRFQALQFRLADMETELSASRLLL 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A+  D    ++ +A     MA   K +       V  EA++  GG GY+ E  I + 
Sbjct: 304 YSAASKLDR---KTHDAGKWSAMA---KRFVTDTGFNVANEALQLFGGYGYLHEYGIEKL 357

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 358 VRDLRVHQILEGTNEIM 374


>gi|56205490|emb|CAI22389.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|119626804|gb|EAX06399.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_a [Homo sapiens]
          Length = 454

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 193 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 251

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 252 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 310

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 311 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 366

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 367 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 419

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           + +  R++    I  G+     L V
Sbjct: 420 VEKLMRDAKIYQIYEGTSQIQRLIV 444


>gi|307295312|ref|ZP_07575151.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878815|gb|EFN10034.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 394

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 29/245 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++  K  DG Y LSG+K W  ++P++D F++ A+ +   G  + 
Sbjct: 137 FGLTEPDAGSDPGGMRTRATKTPDG-YRLSGNKTWISNAPIADVFVIWAKSDAHGGA-IR 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATV-----ELEFSNTFGFLLGDLNVSTGPVEDMK 313
             +LE G   GL   +++ K+  R++ T      E+E       LL D+    GP     
Sbjct: 195 GFVLEKGM-KGLSAPKIEGKLSLRASITGMVNLDEVEVGEE--ALLPDVEGLKGP----- 246

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAA 368
               L+ A   +    +  AEA  +A R     R   G  L    + ++ +AD+  DI  
Sbjct: 247 -FGCLNRARYGIGWGSMGAAEACFHAAREYGLDRKQFGRPLAATQLYQKKLADMLTDITL 305

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               S R+    D+ +       +A  M  + K      A  +   A +  GG+G   E 
Sbjct: 306 GLQASLRVGRLMDDGR-------FAPEMVSLIKRNNVGKALDIARMARDMHGGNGISGEY 358

Query: 429 SIARH 433
            + RH
Sbjct: 359 PVMRH 363


>gi|146305634|ref|YP_001186099.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573835|gb|ABP83367.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 403

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 27/274 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +   K  D  Y ++G K +++S   +DA ++ A ++  +G   +
Sbjct: 133 MAITEPGCGSDSAAIRTTAVKDGDH-YVINGEKIYVTSGERADAVVVWASLDRSLGRAAI 191

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVEDM 312
              ++E G+P G+   RL+ K+G +++ T  + FS+       LLG  +++V  G    M
Sbjct: 192 KSFVVEKGTP-GMTVTRLEKKLGIKASDTASISFSDCRVPAANLLGNAEIDVQKGFAGVM 250

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILID--QPVMKRAIADIAL----- 364
           +     D+    V+GM V +A  A+   R      G   D  +P++    A+  L     
Sbjct: 251 ET---FDNTRPLVAGMAVGVARAALERTRELLSKAGCRFDYARPLLSVTHAEATLYRLEA 307

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  AA  L+ + A   D     S+EA+ A+  A        ++A  V  + +E  G  GY
Sbjct: 308 EWEAARLLTLKAAWMADNKLPNSKEASIAKAKA-------GRVASEVTLKCVELAGALGY 360

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E+  + +  R+S    I  G+    +L V   L
Sbjct: 361 GEDELLEKWARDSKILDIFEGTQQIQLLIVARRL 394


>gi|90424697|ref|YP_533067.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90106711|gb|ABD88748.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 386

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 38/280 (13%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           AP     +   +G++E   G+D+AAI +    +SDG  Y ++G K W  +   +D   +L
Sbjct: 112 APAIAGDMVACIGVSEPGAGSDVAAIKTSA--VSDGDDYLINGGKMWITNGTQADWICLL 169

Query: 247 AQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTF 295
           A      + R    +V  +       G+   R  +K+G  S+ T ++ F        N  
Sbjct: 170 ANTGDGAKHRNKSLIVVPM----KSKGVTVARKLDKLGMHSSDTAQIFFDEVRVPKRNRI 225

Query: 296 GFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           G          G     ++L +    L  A   +    +++A+ I Y R R   G  ++D
Sbjct: 226 G--------EEGMGFTYQMLQFQEERLWGAAACLKAHDLTIADTIDYTRNRKAFGHSILD 277

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +A++  ++ A  AL +R A +    +  ++ A  A++ A        ++   +
Sbjct: 278 NQTVHFRLAELQTEVEALRALVYRAAEAMLAGEDVTKLATMAKLKAG-------RLGREI 330

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               ++  GG G++ E +++R YR++   SI  G+   M+
Sbjct: 331 PDACLQFWGGMGFMNETAVSRAYRDARLTSIGGGADEVML 370


>gi|71005060|ref|XP_757196.1| hypothetical protein UM01049.1 [Ustilago maydis 521]
 gi|46096558|gb|EAK81791.1| hypothetical protein UM01049.1 [Ustilago maydis 521]
          Length = 424

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 116/248 (46%), Gaps = 27/248 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           +TE   G+D+A I ++ +K  D  + ++G K W  +   ++ + +LA+ +   +    + 
Sbjct: 165 VTEPGAGSDVANIATKAEKQGDK-WVINGSKMWITNGGKANWYFVLAKTDPSAKAAKSMT 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
             +++  +P G+   + +  +G R + T ++ F N    ++ + N+   P +  K  +  
Sbjct: 224 GFVVDADTP-GIIVGKKEINMGQRCSDTRQITFENV---VVPEENILGKPGDGFKTAMGA 279

Query: 318 LDSAIMSVSGMRVSLAE-AIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            D     V+   V LA+ A+H    YA+ R   G  +ID   +   +AD+ +++ AA  L
Sbjct: 280 FDITRPLVAAGAVGLAQRALHEAAIYAQDRKTMGKAIIDHQAIAFLLADMQMNVEAARNL 339

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV---IAEAMECIGGSGYIEERS 429
            ++ + + D+ +  S  A+ A+          C+   A       A++  GG G+  E  
Sbjct: 340 VWKASWAKDQGQRNSFWASMAK----------CRAGEAANFNADAAVQIFGGLGFNTESP 389

Query: 430 IARHYRES 437
           + + YR++
Sbjct: 390 VEKLYRDA 397


>gi|296170294|ref|ZP_06851885.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895017|gb|EFG74736.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 28/259 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           M    V     LTE   G++ A + ++  +  +G + +SG K F++ +P++D F++ A+ 
Sbjct: 119 MASGDVVASFALTEPGAGSNPAGLRTKAVR-DEGDWVISGQKRFITNAPVADLFVVFART 177

Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                    +  FLVP         G+       K+G     T ++ F +     G L+G
Sbjct: 178 RPADEQGPGIAVFLVP-----AKAPGVEVGAKDAKMGQEGAWTADVTFDDVRVEDGALIG 232

Query: 301 ---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
              D+          +  +++  A ++V   + +L E++ YA      G  +    +++ 
Sbjct: 233 GSEDIGYRAAMTSLARGRVHI--AALAVGAAQRALDESVSYAATATQGGAPIGTFQLVQA 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD    + A  AL    A  +   + R       R+     K +C +MA  V   A++
Sbjct: 291 MIADQQTGVLAGRALVRDAARLWVTGEDR-------RVAPSAAKLFCTEMAGNVADLAVQ 343

Query: 418 CIGGSGYIEERSIARHYRE 436
             GGSGY+    + R YR+
Sbjct: 344 VHGGSGYMHGVPVERIYRD 362


>gi|169631612|ref|YP_001705261.1| putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC
           19977]
 gi|169243579|emb|CAM64607.1| Putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 386

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252
            GLTE  GGTDI           +G + ++G K F+++  +D  A + +A V GR     
Sbjct: 126 FGLTEPGGGTDIPGSIRTRAVEDNGSWVINGAKAFITNSGTDITAVVGVAAVTGRSADGS 185

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
             +    VP     G+P G   +   +K+G  ++ T  L F +    +  LLG+     G
Sbjct: 186 PEISVIHVP----SGTP-GFTVEPGYDKVGWHASDTHPLSFDDVRVPYENLLGERG--RG 238

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               ++IL    +  A ++    +  + E++ YAR R   G  +ID   +   IA +   
Sbjct: 239 YAGFLRILDEGRIAIAAVATGAAQGCVDESLRYARSRPAFGSAIIDYQSVSFKIARMQAR 298

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              A    +  A      K    EA+ A+++A        + A     +A +  GG+G++
Sbjct: 299 AHTARLAYYHAAALLLAGKPFKTEASIAKLIA-------SEAAMDNARDATQIFGGAGFM 351

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
            E  +AR YR+S    + +G G + V
Sbjct: 352 NESPVARQYRDS--KILEIGEGTSEV 375


>gi|254509608|ref|ZP_05121675.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533319|gb|EEE36307.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 563

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T     +W PK+ S E  PT                TE   G
Sbjct: 258 GSLGTRSEIAAELIIAGGTDEQKANWLPKLASAEILPTAV-------------FTEPNTG 304

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  K +DG Y ++G+K W   +  +    +LA+          +  FL    
Sbjct: 305 SDLGSLRTRAVKDNDGNYKITGNKTWITHAARTHVMTLLARTNPDSTDHRGLSMFLAEKT 364

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   E+  P  G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 365 PGTDENPFPTPGMTGGEIE-VLGYRGMKEYELGFD---GFEVKGKNLLGGEEGKGFKQLM 420

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     A+ YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 421 ETFESARIQTAARAIGVAQSALDIAMQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMIAR 480

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D  +    EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 481 QLTYYSAWEKDHGQRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 533

Query: 431 AR 432
           +R
Sbjct: 534 SR 535


>gi|52142424|ref|YP_084405.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus E33L]
 gi|51975893|gb|AAU17443.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus E33L]
          Length = 382

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|162447963|ref|YP_001621095.1| acyl-CoA dehydrogenase [Acholeplasma laidlawii PG-8A]
 gi|161986070|gb|ABX81719.1| acyl-CoA dehydrogenase [Acholeplasma laidlawii PG-8A]
          Length = 375

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF-IMLAQVEGRVGC 255
            G G TE +GG+++   T+   K  D  + L+G+K  +++  +++ + ++L   E  + C
Sbjct: 118 FGFGSTEPQGGSNVMGHTASAVKEGD-YWILNGNKTMITNGGLAEVYLVLLKTAENELTC 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           FLV     D    G  Y + ++  G R     E+   N   T  ++LG +       +  
Sbjct: 177 FLV-----DKDMPGFKYGKQEDFFGMRGTPVGEIFLENVKVTDEYMLGKIGEGVMIGDSA 231

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                ++   ++    + +L   + YA  R      +ID   ++  I +IA+     T L
Sbjct: 232 HYDARINMGAIAAGICQHALDIVLDYATERKAIDKPIIDLFSIQNKITEIAI-AKENTQL 290

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A     AK +S+   Y ++ + + K +  + A      A++ +GG GY  E  +  
Sbjct: 291 LYEEA-----AKLKSQGKPYDKV-STMAKSYGSRAAFTSCDHALQVLGGYGYSNEYPVEH 344

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R++ A  I  GS   MV+++
Sbjct: 345 LLRDARALQIAEGSLEKMVIEI 366


>gi|73541102|ref|YP_295622.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72118515|gb|AAZ60778.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 618

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 63/314 (20%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ +T+    +G+      Y L G+K ++S+    +SD  +  +LA++ G 
Sbjct: 163 LSEPQAGSSLSDVTTRAEYEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGP 222

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 223 DGKLVPGVKGISLFIVPKYLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKY 282

Query: 292 -----SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                +   G+L+G+    L      + + +I + L + ++  +G       A+ YAR R
Sbjct: 283 KPAGKAGAIGYLVGEPGKGLACMFHMMNEARIGVGLGAVMLGYTGY----LHAVDYARNR 338

Query: 343 HVS-----GGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                   GG         L++   ++R +      +    AL+   A   DE ++ S +
Sbjct: 339 PQGRPVGPGGKDPASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASAD 398

Query: 390 AAYAR-------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A           I+ PI K W  +        A++  GG GY  E ++ + YR++  N I
Sbjct: 399 AVKHEQLSLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPI 458

Query: 443 LLGSGNAMVLDVLN 456
             G+     LD+L 
Sbjct: 459 HEGTHGIQGLDLLG 472


>gi|83309407|ref|YP_419671.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82944248|dbj|BAE49112.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 553

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 45/303 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +  ++ L  T    ++W PKI S E  PT                TE   G
Sbjct: 245 GSLGTRSEIAGELIRLGGTEEQKQEWLPKIASGEILPTAV-------------FTEPNTG 291

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----GCFLV----P 259
           +D+ ++ ++  K  D  Y ++G+K W   +  +D   +L +         G  ++    P
Sbjct: 292 SDLGSLRTRAVKQGDE-YVVTGNKTWITHAARTDVMTLLVRTNPDTKDWKGLSMMIAPKP 350

Query: 260 RLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KI 314
           R  E       G+    +K  +G R     EL F    GF +   N+  G VE     ++
Sbjct: 351 RGTEANPFPAEGMTGGEIK-VLGYRGMKEYELGFD---GFKVPAANL-LGGVEGQGFKQL 405

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   V +A+      + YA  R   G  + + P +   IA +A++   A
Sbjct: 406 METFESARIQTAARAVGVAQCAMEVGLKYANERVQFGKPIYEFPRVGGKIAWMAVETMIA 465

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   DE      EA  A+++A        ++A A    A++  GG+GY EE  
Sbjct: 466 RQLTYFSAREKDEGHRCDIEAGMAKLLA-------ARVAWANADNALQVHGGNGYAEEYP 518

Query: 430 IAR 432
           I+R
Sbjct: 519 ISR 521


>gi|328860631|gb|EGG09736.1| hypothetical protein MELLADRAFT_42430 [Melampsora larici-populina
           98AG31]
          Length = 430

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 119/267 (44%), Gaps = 23/267 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           +TE   G+D+A I +   K  D  Y ++G K W  +   +  + +LA+   E  V   + 
Sbjct: 171 VTEPGAGSDVAGIKTTAVKKGDQ-YVINGTKMWITNGGQASWYFVLAKTDPEAAVHKSMT 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
             +++  +P G+   + +  +G R + T ++ F       SN  G       ++    + 
Sbjct: 230 GFVVDANTP-GITVGKKEINMGQRCSDTRQITFEDVAIPASNVIGTSGEGFKIAMKAFDI 288

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + L+    A  +V   + +L EA+ YA+ R+  G  +I+   +   +A++ + + A+  
Sbjct: 289 TRPLV----ASGAVGLAQRALTEAVKYAQTRNTMGKPIIEHQNVSHMLAEMTIGVEASRM 344

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + ++ A   D  +  +  A+ A+ MA        ++A      A++  GG+G+  E  + 
Sbjct: 345 MVWKSAFVKDIGQRNTYYASIAKCMA-------SEVAVKNAGLAVQIFGGAGFNTEYPVE 397

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           + YR+S   ++  G+     L +   L
Sbjct: 398 KLYRDSKIFTLYEGTSQIQRLIISKFL 424


>gi|308461830|ref|XP_003093203.1| hypothetical protein CRE_07031 [Caenorhabditis remanei]
 gi|308250680|gb|EFO94632.1| hypothetical protein CRE_07031 [Caenorhabditis remanei]
          Length = 428

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 37/290 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF-IMLA 247
           P   T   +   L E   G+D  A+ +  +K  D  Y ++G K W  +S  S+AF +ML 
Sbjct: 149 PRSVTEAVLSFALYEVSSGSDAFALKTTAKKDGDD-YIINGSKMWITNSEHSEAFLVMLI 207

Query: 248 QVEGRVGCFL--VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE--FSNTFGFLLGDLN 303
           +V+      L  + R+  D          L N+  N  +A + L    S TF      ++
Sbjct: 208 RVKDTKESLLSWLTRIARDLV--------LANRKTNLESARLPLVPFISTTF------VS 253

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
            S    E+ +    L++  + +    + LA+      I Y ++R   G  LID   M+  
Sbjct: 254 PSQRFWENTEKC--LNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGERLIDFQGMQHQ 311

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAP 409
           IA I  +I AA  L +  A   +       EAA A++ A           ++    ++A 
Sbjct: 312 IAQIRTEIEAARLLVYNAARMKENGLPFVREAAMAKLFASQVTTETESLRSQSTYFQVAT 371

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              ++ +E +GG G+ +E  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 372 NTTSKCVEWLGGVGFTKEFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 421


>gi|75764463|ref|ZP_00743954.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488051|gb|EAO51776.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 195

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 24/195 (12%)

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-LDSA 321
           +  GL      +K+G R++ T E+           +LGD+N      +  K  +Y LD  
Sbjct: 4   TSEGLTISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVN------KGFKQFLYTLDGG 57

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +S++ + V +A+     A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + 
Sbjct: 58  RISIAALAVGIAQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKA 117

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  K   +EAA A++ A        + A  +  +A++  GG GY+ E  + RH R+
Sbjct: 118 AWLKDNDKPFGKEAAMAKLFAS-------EAASRIANQAVQIHGGYGYMREYEVERHIRD 170

Query: 437 SPANSILLGSGNAMV 451
             A  + +G G + +
Sbjct: 171 --AKLLEIGEGTSEI 183


>gi|103487177|ref|YP_616738.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977254|gb|ABF53405.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 387

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
            G+TE   GTD   I +  +K+ D  Y ++G K W   +  SD  ++L +   R  C   
Sbjct: 122 FGVTEPTAGTDTTRIRTFARKVGDK-YVVNGQKIWISRAEHSDLMVLLCRTTPRDECAKP 180

Query: 256 ------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
                  LV   + +    GL  + L+  +   ++AT EL F +               F
Sbjct: 181 SDGMSVLLVD--MREAVGKGLTIRPLRTML---NHATTELFFDDLEVPAANLIGEEGRGF 235

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   +   R  +  A  YAR R V G  + +   +
Sbjct: 236 RYILSGMNAE-------RILI----ASECIGDGRFFVDRATAYARDRSVFGRPIGENQGI 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA   + IAAA  +  + A  FD       EA  A+++A    ++   M        
Sbjct: 285 QFPIARAYVQIAAAAEMVAKAARLFDAGADCGTEANMAKMLASEASWYAADM-------C 337

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+ EE  I R +RE+
Sbjct: 338 LQTHGGFGFAEEYDIERKFRET 359


>gi|284165619|ref|YP_003403898.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015274|gb|ADB61225.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 416

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 53/285 (18%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
           P+ +  ++    +TE +  GG+D   + S   K  D  + ++ HKW+ S  + +D ++++
Sbjct: 119 PLVQGELSSAFAMTEPKQGGGSDPKMLQSTAVKDGDE-WVVNAHKWWTSDGLDADFYLVM 177

Query: 247 AQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG-----NRSNATVELEFSN- 293
           A+        EG     LVPR       +G+   R    +G      R     E++F N 
Sbjct: 178 ARTDLDAHPYEG-TSIILVPR-----DADGVEVVRNVPHLGGHGITEREGGHAEVKFDNV 231

Query: 294 -----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARR 341
                        GF +  + +  G +          +  M  SGM + SL  A  Y + 
Sbjct: 232 RVPVENTIGEENEGFRIAQMRLGGGRL----------THCMRYSGMAQRSLEIAKAYLQE 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L D+  ++  IAD    + AA  +    A   D    RS+    ARI   ++K
Sbjct: 282 REAFGTKLEDKQALRHRIADAETRLHAARCMVRHAARELD----RSD----ARIEVAMSK 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +   +    I  A++C GG+G  ++  IA  Y    A  I+ G+
Sbjct: 334 MFTANVTQDTIDLALQCCGGNGIGKDLPIAHFYENVRAFRIVDGA 378


>gi|239941428|ref|ZP_04693365.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239987893|ref|ZP_04708557.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291444871|ref|ZP_06584261.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291347818|gb|EFE74722.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 386

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 52/317 (16%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAI-TSQGQKI 221
           L  T    + W PK+ + E              A+G  GLTE  GG+D     T+     
Sbjct: 100 LFGTEEQKRQWLPKLCAGE--------------ALGAFGLTEPDGGSDAGGTRTTAVLDK 145

Query: 222 SDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCY 272
           +   + ++G K F+++  +D    + +  V GR       +   +VP     G+P G   
Sbjct: 146 ATNEWVINGSKCFITNSGTDITELVTVTAVTGRKEDGRPLISAIIVP----SGTP-GFTV 200

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
               +K+G  ++ T EL F++       LLG+           + L  LD   +++S + 
Sbjct: 201 AAPYSKVGWSASDTRELSFTDVRVPAANLLGEQGRGYA-----QFLRILDEGRIAISALA 255

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             LA     E++ YA  RH  G  +     ++  IAD+ +  A    + +R      +A 
Sbjct: 256 TGLAQGCVDESVKYAAERHAFGRPIGANQAIQFKIADMEMR-AHMARIGWR------DAA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           SR       +  A I K +   +A     +A +  GG G++ E  +AR +R+S    + +
Sbjct: 309 SRLVAGEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEI 366

Query: 445 GSGNAMVLDVLNLLEKG 461
           G G + V  +L   E G
Sbjct: 367 GEGTSEVQRMLIARELG 383


>gi|296140718|ref|YP_003647961.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028852|gb|ADG79622.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 458

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 20/233 (8%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A++++  + + G Y L+G K  +    S + F++ A+++G+   F+V    E G+ N
Sbjct: 227 DPFALSTKATRTAGG-YVLTGVKSMVPQAASAELFVVGAELDGKPALFIV----ESGT-N 280

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVEDMKILIYLDSAIM 323
           G+  +     +G R+ +   L  +N       LLG  DL+ +T    D+  L  L  + +
Sbjct: 281 GVIIEG-DPSMGLRAASLGRLNLNNVKVPSSALLGEVDLDTATQNYTDVVRLARLGWSAL 339

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R  L     Y + R   G  +  +  +  A+AD+A +I     L +R A+  ++ 
Sbjct: 340 ALGTSRAVLDYVTPYVKEREAFGEPIAHRQAVAFAVADMATEIDGLELLVWRGASRAEQG 399

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            S   EAA AR        +       +  + ++ +GG G+ +E  + R YR+
Sbjct: 400 LSFGREAALAR-------KFATDKGMRIGLDGVQLLGGHGFTKEHPVERWYRD 445


>gi|323694953|ref|ZP_08109103.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323501043|gb|EGB16955.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 377

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 19/257 (7%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG 254
           G+G   LTE   G+D  AI ++  K  DG Y ++G K F++ +P +D +++ A+ E   G
Sbjct: 117 GMGSFCLTEPDAGSDAGAIRTKAVK-KDGEYIITGRKCFITNAPHADFYVVFAKTEPDAG 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVED 311
              +   L +    GL   + ++K+G R + T ++   E       LLG      G    
Sbjct: 176 TKGISAFLVERGREGLSIGKHEDKMGIRLSTTADVILEEVHVPEDHLLG--AEGKGFKLA 233

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L    L+ A M+    + ++  ++ YA+ R   G  +     ++  +AD+ +   AA
Sbjct: 234 MQTLDRTRLECAAMAAGLSQRAIDLSVDYAKTRVTFGKPIAKLQAIQFMLADMEIRNQAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +L ++ A   D      +       M  + K +  + A     +A++   G GY  E  
Sbjct: 294 RSLVYQCAAMIDSGAVDGK-------MNAVAKTFSSEAAMQNTLDAVQIFSGYGYSREYE 346

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 347 VEKLMRDAKIFMIFEGT 363


>gi|311107955|ref|YP_003980808.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762644|gb|ADP18093.1| acyl-CoA dehydrogenase, N-terminal domain protein 12 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 18/268 (6%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QV 249
           M    +   +G+TE   G+D+  I ++ ++  D  Y ++G K F ++      +MLA + 
Sbjct: 117 MASGDIVASIGMTEPGAGSDLQGIKTRARRDGDS-YVITGSKTFNTNGHHADLVMLAVKT 175

Query: 250 EGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
           +  +G   V  L+ E     G       +KIG ++  TVEL F         LLG     
Sbjct: 176 DASLGAKGVSLLMVETRDLAGFRRGEPLDKIGLKAQDTVELFFDEARVPAANLLGAAE-G 234

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G  + M  L Y  L   I +V  +  +L   + +  +R   G     QP+ K  + +  
Sbjct: 235 QGFSQMMAQLPYERLLIGIRAVGSIERALRLTLEHVHQRQAFG-----QPLFK--LQNTR 287

Query: 364 LDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + A     +  LA  F D+  +  ++       A + K+W  +     +   ++  GG 
Sbjct: 288 FEFAEMKTEA-TLARVFIDQCIAWQQQGRLDAATAAMAKWWGTQKECETVDRCLQLFGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G++ E  IAR Y +S    I  G+   M
Sbjct: 347 GFMREYPIARMYMDSRGQKIYGGANEVM 374


>gi|297196545|ref|ZP_06913943.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153272|gb|EFH32256.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 380

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           ++E   G+D  A+ ++  +  D  Y L+G K F+S+ P++D F + A+   R G   +  
Sbjct: 126 ISEPDSGSDALAMRTRAVRDGDA-YVLNGSKAFVSNGPVADVFTVYARTSDRPGPLSITA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            L D    GL   R   K+G R++   EL F +              GFL+ D       
Sbjct: 185 FLVDRDTPGLTLGRPLAKMGLRTSPLCELYFDDCRVPADRVVGRPGGGFLVLD------H 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V   +IL    S +++   M+  +   + YA+ R   G  +     +   I D+A  +  
Sbjct: 239 VMRWEILC---SFVINAGEMQRRVDACVRYAQTRSQFGQPIGSYQAVSHKIVDMATGVET 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +    +  A       + + + A A+++         +   A    A++  GG+GY+ E 
Sbjct: 296 SRRWLYETARRMTAGDNVTRDIAMAKLVT-------SEANVASALAAVQIFGGNGYMAEF 348

Query: 429 SIARHYRESPANSILLGS 446
            I    R + A +I  G+
Sbjct: 349 GIESQLRNAVAGTIYSGT 366


>gi|118472013|ref|YP_886562.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173300|gb|ABK74196.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 397

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 28/266 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ +   DG Y + G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRARNNDDGTYTIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             FL+  P    +  P GL      +K+G +   T EL F + +     D+   T     
Sbjct: 189 TAFLIEKPEGFGEVLP-GLTIPGKLDKLGYKGIDTTELIF-DGYRADAADILGGTPGQGF 246

Query: 312 MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +++  ++   ++VS      G+R +   A+ YA++R   G  + +   +   +A++A  
Sbjct: 247 FQMMDGVEVGRVNVSARACGVGLR-AFELAVRYAQQRETFGKPIAEHQAVAFQLAEMATK 305

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  +    A   D  +          + A + KY   +    V  +A    GG GY 
Sbjct: 306 VEAAHLMMVNAARLKDSGERND-------VAAGMAKYLASEFCSEVTQQAFRIHGGYGYS 358

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
           +E  I R  R++P   +L+G G + +
Sbjct: 359 KEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|15608115|ref|NP_215490.1| acyl-CoA dehydrogenase FADE13 [Mycobacterium tuberculosis H37Rv]
 gi|15840401|ref|NP_335438.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|121636901|ref|YP_977124.1| putative acyl-coa dehydrogenase fadE13 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660755|ref|YP_001282278.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis H37Ra]
 gi|148822184|ref|YP_001286938.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis F11]
 gi|215402778|ref|ZP_03414959.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis 02_1987]
 gi|218752643|ref|ZP_03531439.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|219556841|ref|ZP_03535917.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|224989372|ref|YP_002644059.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799997|ref|YP_003032998.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 1435]
 gi|254231280|ref|ZP_04924607.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis C]
 gi|254363899|ref|ZP_04979945.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549957|ref|ZP_05140404.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185880|ref|ZP_05763354.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|260199996|ref|ZP_05767487.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|260204183|ref|ZP_05771674.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289442392|ref|ZP_06432136.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|289446550|ref|ZP_06436294.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|289555243|ref|ZP_06444453.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 605]
 gi|289568948|ref|ZP_06449175.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|289573606|ref|ZP_06453833.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289744706|ref|ZP_06504084.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis 02_1987]
 gi|289761110|ref|ZP_06520488.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|294996465|ref|ZP_06802156.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis 210]
 gi|297633499|ref|ZP_06951279.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 4207]
 gi|297730484|ref|ZP_06959602.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN R506]
 gi|306775107|ref|ZP_07413444.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu001]
 gi|306781978|ref|ZP_07420315.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu002]
 gi|306783658|ref|ZP_07421980.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu003]
 gi|306788021|ref|ZP_07426343.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu004]
 gi|306792358|ref|ZP_07430660.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu005]
 gi|306796757|ref|ZP_07435059.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu006]
 gi|306802644|ref|ZP_07439312.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu008]
 gi|306806824|ref|ZP_07443492.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu007]
 gi|306967022|ref|ZP_07479683.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu009]
 gi|306971213|ref|ZP_07483874.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu010]
 gi|307078941|ref|ZP_07488111.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu011]
 gi|307083499|ref|ZP_07492612.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu012]
 gi|313657812|ref|ZP_07814692.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN
           V2475]
 gi|3261633|emb|CAB02012.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE13 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880569|gb|AAK45252.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|121492548|emb|CAL71016.1| Probable acyl-coa dehydrogenase fadE13 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600339|gb|EAY59349.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis C]
 gi|134149413|gb|EBA41458.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504907|gb|ABQ72716.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis H37Ra]
 gi|148720711|gb|ABR05336.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis F11]
 gi|224772485|dbj|BAH25291.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321500|gb|ACT26103.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 1435]
 gi|289415311|gb|EFD12551.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|289419508|gb|EFD16709.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|289439875|gb|EFD22368.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 605]
 gi|289538037|gb|EFD42615.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289542702|gb|EFD46350.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|289685234|gb|EFD52722.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis 02_1987]
 gi|289708616|gb|EFD72632.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|308216453|gb|EFO75852.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu001]
 gi|308325299|gb|EFP14150.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu002]
 gi|308331571|gb|EFP20422.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu003]
 gi|308335366|gb|EFP24217.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu004]
 gi|308339168|gb|EFP28019.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu005]
 gi|308342835|gb|EFP31686.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu006]
 gi|308346730|gb|EFP35581.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu007]
 gi|308350643|gb|EFP39494.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu008]
 gi|308355303|gb|EFP44154.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu009]
 gi|308359348|gb|EFP48199.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu010]
 gi|308363255|gb|EFP52106.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu011]
 gi|308366913|gb|EFP55764.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu012]
 gi|323720686|gb|EGB29764.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CDC1551A]
 gi|326904799|gb|EGE51732.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis W-148]
 gi|328459739|gb|AEB05162.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 4207]
          Length = 382

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATA--- 371
            +  A  + S  +  L     + R R   G  LI +  ++  +A++A  +D+A   A   
Sbjct: 243 RIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHV 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 303 VERQLAGETDLIA----QVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YR+     + +G G   +L  L
Sbjct: 352 RQYRD--MRILGIGGGTTEILTAL 373


>gi|302834786|ref|XP_002948955.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
           nagariensis]
 gi|300265700|gb|EFJ49890.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
           nagariensis]
          Length = 425

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 24/243 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +A+T+   K+  G + ++G+K W  +   +D  ++ A+   +G+V  F+V
Sbjct: 143 LTEPSNGSDASALTATATKVPGG-WMINGYKRWIGNGTWADVTVVWARNNQDGQVNAFIV 201

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +    G+P GL   +++NKI  R     ++ FS  F      L   T   +  K+L   
Sbjct: 202 RK----GNP-GLRTAKIENKIALRCVQNADMTFSQCFVPDSARLPEVTSFADTNKVLAI- 255

Query: 319 DSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            S IM V+   V L+  ++     Y   R      L    +++  +A +   I       
Sbjct: 256 -SRIM-VAWQPVGLSVGVYDMCCRYVTERKQFNTQLGSFQLVQEKLARMGGHIQGMWLAC 313

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL+  ++E +   E+A+       + K W       V+A   E +GG+G +    +A+ 
Sbjct: 314 WRLSKLYEEGRMSHEQAS-------LVKAWTSARGREVMALGRELLGGNGILGHFLVAKS 366

Query: 434 YRE 436
           + +
Sbjct: 367 FSD 369


>gi|295699821|ref|YP_003607714.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439034|gb|ADG18203.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 423

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ ++  DG + L+G K F++    + ++  F +     G+ G   
Sbjct: 171 LTEPQAGSEANNLRTRAER-RDGQWILNGSKQFVTNGARAGLAIVFAVTDPERGKRGLSA 229

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      S  G    R ++K+G R++ T  +         + + N+   P E ++I 
Sbjct: 230 FIVPT-----STPGFDVGRPEHKLGIRASDTCPISLDRC---AVPEANLLGEPGEGLRIA 281

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   V +A A   A       R   G  L D   +   +AD+A  + AA
Sbjct: 282 LSNLEGGRIGIAAQAVGIARAAFDAARRYASEREQFGKPLKDHQTIANMLADMATRLNAA 341

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      +    EA+ A++ A        ++A  + + A++  GG GY+E+ +
Sbjct: 342 RLLVHHAARLRSAGRPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 394

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 395 VERHYRDARITQIYEGT 411


>gi|295700543|ref|YP_003608436.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439756|gb|ADG18925.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 403

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 21/265 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   +  AI    L+E + G+D+AA+    ++  D  Y L G K W  +  ++D +++ A
Sbjct: 128 PRVASGTAIAAFALSEPQAGSDVAAMALAAREEGDH-YVLDGEKTWISNGGIADFYVVFA 186

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +     G   +   + D    GL      + I    +    L F+N        L V   
Sbjct: 187 RTGEAPGARGISAFIVDAETPGLDIAERIDVIA--PHPLARLRFTNARVPKSRMLGV--- 241

Query: 308 PVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           P E  KI      +     A  S+   R ++AE +  A  R + G  L D  + +  +A 
Sbjct: 242 PGEGFKIAMRTLDVFRTSVAAASLGFARHAMAEGLARAASRKMFGQTLGDFQLTQAKLAQ 301

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL I ++  L +R A   D+ +S + EAA A       K+   + A  VI  A++  GG
Sbjct: 302 MALTIDSSALLVYRAAWLRDQGESVTREAAMA-------KWHASEGAQQVIDAAVQLYGG 354

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G     ++   YRE  A  I  G+
Sbjct: 355 MGVQSGSAVEMLYREIRALRIYEGA 379


>gi|229018412|ref|ZP_04175280.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1273]
 gi|229024641|ref|ZP_04181086.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1272]
 gi|228736706|gb|EEL87256.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1272]
 gi|228742892|gb|EEL93024.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH1273]
          Length = 382

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G+K     + ++G K F + +P+ D FI+ A +EGR  +G F++P+  
Sbjct: 136 RGGKPETLAVQKGEK-----WIINGRKTFTTMAPVLDYFIISASIEGREEIGEFVIPK-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + I  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTIGVTIEETWDSIAMRGTASHDLVLQNVEIENRFF-----TDVWGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAVSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA    E+    +      KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 301 IAKKYDEA----EDKLLLQAELAAAKYVVTNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|83769086|dbj|BAE59223.1| unnamed protein product [Aspergillus oryzae]
          Length = 539

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 263 ICLAITEPDAGSDVANLTCEAKLTPDGKHYIVNGEKKWITNGVYADYFTTAVRTGGPGMN 322

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 323 GLSVLLIEREHGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 375

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I      RV   EA+ YA +R   G  LID PV++  +A +A  I 
Sbjct: 376 VIMTNFNHERIGIVIQCCRFARVCYEEAVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIE 435

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A       L N   + +S  E  A  ++   I         T  +C + A  +       
Sbjct: 436 ATYNW---LENIIYQCQSMDETEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYS 492

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 493 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 521


>gi|312197209|ref|YP_004017270.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228545|gb|ADP81400.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 382

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 30/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV---EGRVGC 255
           + ++E   G+D+  I +Q  +  D  + L+G K F+S+ ++ D  I+ A+    EG  G 
Sbjct: 126 IAMSEAEAGSDLRGIATQAVRKGD-RWLLNGSKTFISNGITADLVIVFARTDAAEGAGGY 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLN--VST 306
            L   ++E G P G    R  +KIG  +  T EL F        N  G     L   +  
Sbjct: 185 SLF--VVERGMP-GFERGRKLDKIGLAAQDTAELFFHDVEVPADNLLGSAGAGLRSLMEN 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E M I      A+ +      SL   + Y R+R   G  + +   +   +A++   +
Sbjct: 242 LPRERMGI------AVAAQCSAEASLRWTVDYVRQRRAFGKAVAEFQTVGFTLAELRTQV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               A   R     +     + +AA A       K+W   +   VI   ++  GG GY+ 
Sbjct: 296 EVTRAYLDRCVRQLNAGALSAVDAAKA-------KWWATDVQWKVIDAGVQLHGGYGYMT 348

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR + ++    I  G+   M
Sbjct: 349 EYPIARAFMDARVQRIYGGTNEIM 372


>gi|254744474|ref|ZP_05202154.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
          Length = 176

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +LA AI YA+ R   G  + +Q  +   +AD+A  + AA  L +R A+   +     +EA
Sbjct: 56  ALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEA 115

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A++ A        K A  V  EA++  GG GY ++  + R +R++    I  G+
Sbjct: 116 SIAKLFAS-------KTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGT 164


>gi|167967750|ref|ZP_02550027.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis H37Ra]
          Length = 382

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATA--- 371
            +  A  + S  +  L     + R R   G  LI +  ++  +A++A  +D+A   A   
Sbjct: 243 RIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHV 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 303 VERQLAGETDLIA----QVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YR+     + +G G   +L  L
Sbjct: 352 RQYRD--MRILGIGGGTTEILTAL 373


>gi|332815352|ref|XP_516063.3| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 463

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 21/271 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           P       IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 192 PQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGSLSDVVIVV 249

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           A    E       +   L +    G    R  +K+G ++  T EL F +       LLG+
Sbjct: 250 AVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGE 309

Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            N   G    MK L    L  A +++S       E  +Y ++R   G  +     ++  +
Sbjct: 310 EN--KGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKL 367

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   I    A    + N     +++  ++A     A + KYW  ++  +V  + ++  
Sbjct: 368 AELKTHICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYDCVQLH 420

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IA+ Y ++    I  G+   M
Sbjct: 421 GGWGYMWEYPIAKAYVDARVQPIYGGTNEIM 451


>gi|170702656|ref|ZP_02893523.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132433|gb|EDT00894.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 609

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 48/268 (17%)

Query: 253 VGCFLVPRLL--EDGSPNG----LCYQRLKNKIGNRSNATVELEF-----------SNTF 295
           +  F+VP+ L  +DG+  G    +    L +K+G R      L F           +   
Sbjct: 233 ISLFIVPKYLPADDGAARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGAI 292

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI-- 348
           G+L+G+ N     +  M     ++ A + V    V+L       A+ YAR R     +  
Sbjct: 293 GYLVGEPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGP 347

Query: 349 -----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--- 394
                      ++  P ++R +      +    AL    A   DEA++  E A  A    
Sbjct: 348 AGKDAAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHDEAAVRAEAAQ 407

Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              I+ PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     
Sbjct: 408 LLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQA 467

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           LD+L    K       L  TL+  +G++
Sbjct: 468 LDLLG--RKVGQDDGALLRTLDARIGAT 493


>gi|330898845|gb|EGH30264.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 336

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 18/158 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++       
Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225

Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ +  +DGS    N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKFMVGDDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRR 342
              +  M     L   I  + SG+R S   A+ YA+ R
Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDR 322


>gi|126436799|ref|YP_001072490.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126236599|gb|ABN99999.1| Isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 385

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 24/259 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-- 257
           + LTE  GG+D+ A+T+  ++   G Y ++G K ++++      I L     R       
Sbjct: 121 MALTEPGGGSDLQAMTTHARR-DGGHYVINGAKTWITNARRSQLIALMCKTDRTAVPAHR 179

Query: 258 -VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            V  LL +  P G    R   K+G +   + EL F +       LLG      G  + M+
Sbjct: 180 GVSILLVEKGP-GFEVSRDLPKLGYKGVESCELSFDDFRVPETALLGS-EEGHGFAQMMR 237

Query: 314 IL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            L    I + S  + V+  R +L +++ Y + R   G  +     +   +AD+A  + AA
Sbjct: 238 GLEIGRIQVASRALGVA--RAALEDSLRYVQERETFGKPIWQHQSIGNYLADMATRLTAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L          A  R E    A + A + K +  + A  +  +A+   GG GY  E  
Sbjct: 296 RQL-------VQFAARRYESGDRADMEAGMAKLFASETAMQIALDAVRIHGGYGYSTEFD 348

Query: 430 IARHYRESPANSILLGSGN 448
           + R++R++P   +++G G 
Sbjct: 349 VERYFRDAPL--MIVGEGT 365


>gi|15827272|ref|NP_301535.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221229750|ref|YP_002503166.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|2326699|emb|CAB11012.1| hypothetical protein MLCB1779.31 [Mycobacterium leprae]
 gi|13092821|emb|CAC30169.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219932857|emb|CAR70754.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 400

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 31/278 (11%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           TNK   +   V   + +TE   G+D AA+++      D  Y ++G K F+++      I+
Sbjct: 116 TNKQLERLGKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIV 174

Query: 246 L-AQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
           + A ++  +G      F+VPR        G+  +RL+ K+G R + T  + F N      
Sbjct: 175 VWATLDKSLGHAAIKSFIVPR-----EHPGVTVERLEYKLGIRGSDTAAIRFDNVRIPKD 229

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQP 353
            LLG+  +  G      ++   D+    V+ M V +  A +   R+     GI I  D+P
Sbjct: 230 NLLGNPEIEVGKGFS-GVMETFDNTRPIVAAMAVGVGRAALEEIRKILTDAGIEICYDKP 288

Query: 354 VMKRAIA-----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
              +  A      +  D  A+  LS R A   D     S+EA+       ++K    +MA
Sbjct: 289 SHSQNAAAAEFLRMEADWEASYLLSLRAAWQADNNIPNSKEAS-------MSKAKAGRMA 341

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V  +A+E  G +GY E+  + +  R+S    I  G+
Sbjct: 342 SDVTLKAVELAGTAGYSEKALLEKWARDSKILDIFEGT 379


>gi|84501894|ref|ZP_01000052.1| acyl-CoA dehydrogenase 6 [Oceanicola batsensis HTCC2597]
 gi|84389889|gb|EAQ02523.1| acyl-CoA dehydrogenase 6 [Oceanicola batsensis HTCC2597]
          Length = 388

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 26/265 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ ++       ++E   G+++  + ++  +  D I+      W  +   SD  I++  +
Sbjct: 124 PLLRSERICATCISEPEVGSNVREVKTRADREGDKIFVTGQKLWISNGAQSDFAIVVCNL 183

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVST 306
           +  +   +V R        G    R   K+G    +T EL F     T   +LG  N   
Sbjct: 184 DDGIAMVIVDR------DTGGYESRELRKLGLVGASTCELFFDRAETTAEHVLG--NAGG 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
           G  + +K+    +SA + V    + +A+A     + YA+ R   G  +    +++  +AD
Sbjct: 236 GLFQTLKLF---ESARVFVGLTSIGIAQAALECAVKYAQEREQHGKPIGGHQLIQGYLAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  + AA  L  R     D       + + A       K++  +MA  + ++A++  GG
Sbjct: 293 MATQLDAARLLCQRGLQLLDLGVRCDTQTSMA-------KWYATEMAVEIASKAVQIHGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +G  +E  + RH+R +    I  G+
Sbjct: 346 NGITKEFPVERHFRNTKVMPIPDGT 370


>gi|114567563|ref|YP_754717.1| hypothetical protein Swol_2052 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338498|gb|ABI69346.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 610

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 135/316 (42%), Gaps = 63/316 (19%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWF 234
           PK++S E+  +             + LTE   G+++ A++++     + G++ + G K F
Sbjct: 156 PKMYSGEWGGS-------------MCLTEPGAGSEVGAVSTKCFPTDTPGLWKVKGQKCF 202

Query: 235 LSSPMSDA------FIMLAQVEGRVG-----CFLVPRLL--EDGSP---NGLCYQRLKNK 278
           +++   D        ++    + + G     C +VP+    EDGS    N +    +++K
Sbjct: 203 ITTGDWDGVDNIIHLVLAKDPDAKPGTAGISCLVVPKFWVNEDGSMGAWNDVTTTGIEHK 262

Query: 279 IGNRSNATVELEF---SNTFGFLLGDLNVSTGPVE----------DMKILIYLDSAIMSV 325
           +G   +AT  L F    N +G+++GD     GPV+           M     +++ I S+
Sbjct: 263 LGIHGSATCSLAFGENDNCYGWMIGD-----GPVDGRGQGMAQMFQMMNEERINTGIFSL 317

Query: 326 SGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRL 376
                +   A+ Y++ R  S            +I+   ++R +      + A  AL +  
Sbjct: 318 GAFGAAYYAALEYSKARVQSKKSTDPKGPSVRIIEHEDVRRMLLLQKSVMEACRALLYSS 377

Query: 377 ANSFDEAK--SRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               D +K  +  EE  YA     I  P+ K +   MA  + AEA++  GG G++EE + 
Sbjct: 378 YYYIDMSKEAATEEEREYAEDMFMIQNPLCKAYVSDMAWVMCAEAIQVHGGYGFMEEYAP 437

Query: 431 ARHYRESPANSILLGS 446
           A   R+    ++  G+
Sbjct: 438 ASLARDCKIYTLWEGT 453


>gi|262194893|ref|YP_003266102.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262078240|gb|ACY14209.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 388

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 35/268 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR---- 252
           + + ++E   G+D+A + ++ +   D  + L+G K ++S+ + +D  I+ A+        
Sbjct: 123 LAVAMSEPSAGSDLAGMQTRAEDRGDH-WLLNGSKTYISNGLLADLVIVAARTRSDSRHA 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G F+V   +E     G    R  +K+G  +  T E+ F +    ++   NV   P +  
Sbjct: 182 MGLFVVEAEME-----GFKRGRRLHKLGLDAQDTAEMFFEDV---VVPKANVLGDPTQGF 233

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSG---GILIDQPVMKRAIADIA 363
           + L        L  AI S+S  +V+    + Y + R   G   G   D P  + A     
Sbjct: 234 RYLAQALAVERLQIAIGSISHAQVAFGLTLEYIKDRKAFGRPVGTFQD-PRFRMARMRTE 292

Query: 364 LD-IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +D + +       LAN   E    +E A+ A+++A        ++   VI + ++  GG+
Sbjct: 293 IDAVQSYVDACVMLAN---EGGLTAEVASGAKMLA-------TELEGRVIDDCLQLHGGA 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+EE  I+R YR++    I  G+   M
Sbjct: 343 GYMEEYRISRMYRDARVTRIFGGANEIM 370


>gi|167622162|ref|YP_001672456.1| crotonobetainyl-CoA dehydrogenase [Shewanella halifaxensis HAW-EB4]
 gi|167352184|gb|ABZ74797.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 378

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +   K  DG   L+G K F++S     +I++   +      +    
Sbjct: 123 ITEPSAGSDVGSLLTT-YKRRDGKVYLTGSKCFITSAAGAPYIVVMAKDADSEKPIFTEW 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
             D S  G+   +L  K+G R ++  EL+F       S+ FG             +  + 
Sbjct: 182 FVDMSKPGIKLSKLP-KLGLRMDSCCELQFDEFELEESDMFGIEGNGFMRVKEEFDSERF 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +
Sbjct: 241 LV----ALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVY 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D     S ++A       + K++C      VI  AM+ +GG     E  I+R +
Sbjct: 297 EAAWKCDNGTMTSGDSA-------MCKFYCANAGFEVIDSAMQVLGGYAIAGEHRISRMW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDIRVDRVSGGSDEMQIL 367


>gi|158293556|ref|XP_314893.4| AGAP008769-PA [Anopheles gambiae str. PEST]
 gi|157016765|gb|EAA10215.4| AGAP008769-PA [Anopheles gambiae str. PEST]
          Length = 624

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 34/272 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D  +I S+  K +DG  Y L+G K W     ++D F + AQ E         
Sbjct: 186 LTEPSSGSDAGSIRSRAVKSADGSHYVLNGSKIWISGGGLADIFTVFAQTEVTDPKTGQK 245

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +V  F+V R        G+     ++K+G + + T E+ F +     +   NV  G  
Sbjct: 246 KDKVTAFIVERGF-----GGVTSGPPEDKMGIKCSNTAEVYFDDV---KIPAENVLGGEG 297

Query: 310 EDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              K+ +  L++    +SG     M   + +A  +A  R   G  + +   ++  +A +A
Sbjct: 298 NGFKVAMNILNNGRFGMSGTLAGTMAHCIRKAAEHATTRVQFGQKIENFGNVQEKLARMA 357

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +    + ++ + ++ + D   +    EAA ++I +    ++ C        EA++ +GG+
Sbjct: 358 MHQYVSQSMGYMISGNMDAGHTDYHLEAAISKIFSSEAAWYVCD-------EAIQILGGN 410

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G+++   + +  R+     I  G+ + + L V
Sbjct: 411 GFMKSSGLEKFLRDIRIYRIFEGANDILRLFV 442


>gi|73999767|ref|XP_857956.1| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) isoform 2 [Canis familiaris]
          Length = 429

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 128/306 (41%), Gaps = 63/306 (20%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI----- 225
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K ++ +     
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKANFLSLGDY 192

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKN 277
           Y L+G+K W  + P +D  I+ A+ +  V    VP        ++E   P G    +  +
Sbjct: 193 YILNGNKFWITNGPDADILIIYAKTDLAV----VPASRGITAFIVEKNMP-GFSTSKKLD 247

Query: 278 KIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG--- 327
           K+G R + T EL F       +N  G L   + V         ++  LD   + +SG   
Sbjct: 248 KLGMRGSNTCELIFEDCKVPAANILGHLSKGVYV---------LMSGLDLERLVLSGGPL 298

Query: 328 --MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A + D+   
Sbjct: 299 GLMQAVLDHTIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDQGHC 358

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +++ A   +       +  + A  V  + ++C G +GYI +  + R  R++    I  G
Sbjct: 359 TAKDCAGVIL-------YSAECATRVALDGIQCFGANGYINDFPMGRFLRDAKLYEI--G 409

Query: 446 SGNAMV 451
           +G + V
Sbjct: 410 AGTSEV 415


>gi|298207904|ref|YP_003716083.1| butyryl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83850545|gb|EAP88413.1| butyryl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 380

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 32/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D  A + +   I  G  Y L+G K W  +   +D ++++AQ +   G   + 
Sbjct: 125 LSEPEAGSD--ATSQRTTAIDKGDHYLLNGTKNWITNGGSADYYLVIAQTDKDKGHKGIN 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTG 307
             + +    G      ++K+G R + T  L F++             FGF      +S G
Sbjct: 183 AFIVEKGWEGFEVGPKEDKLGIRGSDTHTLNFNDVKVPKENRIGEDGFGFKFAMKTLSGG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                   I + +  + ++     LA+   Y++ R   G  +++   +   +AD+  +I 
Sbjct: 243 R-------IGIAAQALGIASGAYELAK--KYSKERETFGTKIMNHQAIAFKLADMHTEIE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L  + A   D   +    +A A++       +  ++A     EA++  GG+G+++E
Sbjct: 294 AARLLVMKAAKDKDNGDNYDLSSAMAKL-------YASRVAMETTVEAVQIHGGNGFVKE 346

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R++    I  G+
Sbjct: 347 YHVERLMRDAKITQIYEGT 365


>gi|324327047|gb|ADY22307.1| putative acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+   S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDNLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|302607764|emb|CBW45676.1| putative acyl-CoA dehydrogenase [Streptomyces pristinaespiralis]
          Length = 379

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           ++E   G+D  A+ ++  +  D  Y L+G K F+S+ P++D F + A+   R G   +  
Sbjct: 125 ISEPDSGSDALAMRTRAVRDGDA-YVLNGSKAFVSNGPVADVFTVYARTSDRPGPLSITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            L D    GL   R   K+G R++   EL F +              GFL+ D       
Sbjct: 184 FLVDRDTPGLTLGRPLAKMGLRTSPLCELYFDDCRVPADRVVGRPGGGFLVLD------H 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V   +IL    S +++   M+  +   + YA+ R   G  +     +   I D+A  +  
Sbjct: 238 VMRWEILC---SFVINAGEMQRRVDACVRYAQTRSQFGQPIGSYQAVSHKIVDMATGVET 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +    +  A       + + + A A+++         +   A    A++  GG+GY+ E 
Sbjct: 295 SRRWLYETARRMTAGDNVTRDIAMAKLVT-------SEANVASALAAVQIFGGNGYMAEF 347

Query: 429 SIARHYRESPANSILLGS 446
            I    R + A +I  G+
Sbjct: 348 GIESQLRNAVAGTIYSGT 365


>gi|326778926|ref|ZP_08238191.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326659259|gb|EGE44105.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 102 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 160

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+ F N       ++G+    
Sbjct: 161 TDPAKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEG-- 218

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 219 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLA 275

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   +           K +   +A  V  +A++ +G
Sbjct: 276 DMAMKLEAARQLTYSAA-----AKSERVDGDLT-FFGAAAKCFASDVAMEVTTDAVQLLG 329

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 330 GYGYTRDYPVERMMRDAKITQIYEGT 355


>gi|265992225|ref|ZP_06104782.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263003291|gb|EEZ15584.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 392

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVS 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAMAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|313126607|ref|YP_004036877.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312292972|gb|ADQ67432.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 111/257 (43%), Gaps = 23/257 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246
           P+ +     GL ++E + G+D+A +T+  +K  DG + L+G K+++ + +   ++ +   
Sbjct: 116 PVAENEQISGLAVSEPQTGSDMAGMTTTAEKTDDG-WVLNGEKYWVGNAVEADWLTVYAK 174

Query: 247 -AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
               + R   + +   + +    G   + +  K+G R++    + F +    ++ + NV 
Sbjct: 175 TGDTDDRYSNYTM--FIVETDTEGYEAEHIPEKMGMRASKQGHIVFDDC---VVPEENVI 229

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
             P     +L  + +   + V G  + LA     E   +   R   G  + D    +  +
Sbjct: 230 GTPGGGFYMLADFFNHGRVVVGGHGIGLAAHAIEETWEFVHEREGFGRNISDFQSTQHIL 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ ++  AA +L++R A      ++    AA A+  +  T   C +         M+  
Sbjct: 290 ADMRMEFEAARSLNWRAAEKVANGENAGFWAASAKTKSTETAMMCAE-------RGMQLH 342

Query: 420 GGSGYIEERSIARHYRE 436
           GG   + E  I+R YR+
Sbjct: 343 GGRSVLNEYPISRVYRD 359


>gi|126323368|ref|XP_001377762.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 418

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D  ++ ++ +   +   Y L+G K W  +SP++D F++ A  E G+V  F
Sbjct: 157 FGLTEPNHGSDPGSMETKARYNAASKTYTLNGSKTWITNSPVADLFVVWAVCEDGKVRGF 216

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           L    LE G   GL   +++ K   RS+ T       VE+   N    LL   +  +GP 
Sbjct: 217 L----LEKGM-RGLSAPKIEGKFALRSSITGMILMDDVEVPEQN----LLPHASGLSGPF 267

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIAL 364
                   L +A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  
Sbjct: 268 G------CLTTARFGIAWGALGAAEFCMHTARQYTLDRKQFGVPLAKNQLIQKKLADMLT 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 322 EITLGLHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDMLGGNGI 374

Query: 425 IEERSIARH 433
            +E  + RH
Sbjct: 375 SDEYHVIRH 383


>gi|298524975|ref|ZP_07012384.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE15 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|298494769|gb|EFI30063.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE15 [Mycobacterium
           tuberculosis 94_M4241A]
          Length = 443

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 47/280 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S     +   + F ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G+ NG+    L++K+G +S+ T EL F        G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ +A+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D+A ++    A          ++ 
Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           PI K    + A  ++ E+++ +GGSG++ +  + ++ R++
Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDA 440


>gi|288918624|ref|ZP_06412973.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288350024|gb|EFC84252.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 403

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 167/391 (42%), Gaps = 66/391 (16%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLH-----CSIWDRSFEPVVRKQAHKIRAARLYLM 143
           P    WD+ E  P W  +++ +   GL+      ++W   FEP     +  I +  L+  
Sbjct: 28  PAASEWDEREETP-W-PIIQEAAKIGLYNFDTLSTLW---FEPT--GLSLPILSEELFWG 80

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
              +AG  MS   TS ++  + ++  + +  +W P  F    DP   A            
Sbjct: 81  ---DAGIGMSIMGTSLAVAGIASSGTLEQVGEWVPACFGDAADPKVAA----------YC 127

Query: 202 LTEKRGGTDIAA--ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253
           ++E   G+D+++  + ++  + +D  + L+G K W  +  +++  +++A V+  +     
Sbjct: 128 VSEPHAGSDVSSMRVRARYDEATDE-WVLNGQKAWITNGGIANVHVVVASVDPALRARGQ 186

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---------- 300
             F+VP     G+P GL   R   K+G R++ T ++   +       LLG          
Sbjct: 187 ASFVVP----PGTP-GLSATRKIKKLGLRASHTADVFLDDVRVPGRCLLGGKEKLDERLA 241

Query: 301 ---DLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMK 356
              +   S G        I   +      G+ R +   A+ YAR R   G  +I    + 
Sbjct: 242 LAREGTRSAGQTALATFEISRPTVGAQAVGIARAAYEYALDYARGREQFGRPIITNQAVS 301

Query: 357 RAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            A+AD+ ++I AA  L +R A    +E +  + E + +++ A     W  +       +A
Sbjct: 302 FALADMRMEIDAARLLIWRAAWMGRNEREFTAGEGSMSKLKAGEVAVWATE-------KA 354

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG+GY  E  + R YR++   +I  G+
Sbjct: 355 VQILGGAGYSREHPVERMYRDAKIYTIFEGT 385


>gi|163854363|ref|YP_001628661.1| putative isovaleryl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258091|emb|CAP40390.1| putative isovaleryl-CoA dehydrogenase [Bordetella petrii]
          Length = 392

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 25/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPAAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L + +  G    +  +K+G R + T EL F        N  G + G + V       
Sbjct: 187 TAFLVEKNFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNGGVRV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD     +SG  + + +A+      Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERAVLSGGPLGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +  + D+  +  E     R        +  + A  +  E ++ +GG+GYI 
Sbjct: 298 QASRAFCYAVGKNLDQLGA--EHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYIN 355

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R +R++    I  G+
Sbjct: 356 EYPTGRLWRDAKLYEIGAGT 375


>gi|149185724|ref|ZP_01864040.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148830944|gb|EDL49379.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 32/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A + +  +   D  Y L+G K F+S    +D ++ + +        +   
Sbjct: 129 LTEPGSGSDAAGLKTTARLDGDH-YVLNGTKQFISGGGFNDVYVTMVRTSDHKTKGITCL 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           +++  +P G+ + + + K+G  ++ T ++ F +              GF    + +  G 
Sbjct: 188 VIDKDTP-GISFGKPEKKLGWNASPTAQVIFEDARVPVANRVGDEGEGFRFAMMGLDGG- 245

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+    S+ G +  L EA+ Y + R      + D    +  +AD+A D+ A
Sbjct: 246 --------RLNIGACSLGGAQRCLDEAVAYTKDRKQFDTPISDFQNTQFMLADMATDLEA 297

Query: 369 ATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A AL +  A    D A  +S  +A A+ +A             ++ +A++  GG GY+ E
Sbjct: 298 ARALLYLAAAKVTDNAPDKSRFSAMAKRLA-------TDSGSKIVNDALQLFGGYGYLRE 350

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454
             I R +R+   +SIL G+   M + V
Sbjct: 351 YPIERFWRDLRVHSILEGTNQVMRMIV 377


>gi|319760875|ref|YP_004124812.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115436|gb|ADU97924.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 16/259 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
           + +TE   G+D+ ++ +  + + D     Y L+G K F+++ + S+  I++A+    +G 
Sbjct: 126 IAMTEPGAGSDLKSVRTTARLVKDSEGDHYILNGSKTFITNGINSEIVIVVAKTSPELGA 185

Query: 256 FLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             V  ++ E+G+P G    R   KIG  +  T EL F N     G LLG+ N+    +  
Sbjct: 186 KGVSLIVVEEGTP-GFSKGRKLEKIGLMAQDTSELFFDNVKVPVGNLLGEENMGFKYLMK 244

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+ + + +   L + + Y R R   G  + +         +    +A A A
Sbjct: 245 ELAQERLVVAVRAAASIEAFLQKTVDYTRERKAFGQTVFE-------FQNTRFKLAEAKA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +  L    D+      +       A + K     +   ++ E ++  GG GY+ E  + 
Sbjct: 298 QATMLRVFVDDCMRLHMQRQLTPERAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQVG 357

Query: 432 RHYRESPANSILLGSGNAM 450
           R + ++    I  GS   M
Sbjct: 358 RAWTDARIGRIYGGSDEIM 376


>gi|312199199|ref|YP_004019260.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230535|gb|ADP83390.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 379

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 24/266 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
           S+   L LTE   G+D+A +++  +   D  Y ++G K F++  + +D F+   + +   
Sbjct: 118 SLVCALALTEPGAGSDLAGLSASARLDGDE-YVVNGSKTFITGGLNADIFLTAVKTDPTQ 176

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------V 304
               +  L+ D +  G+       KIG       E+ F +       LLG++        
Sbjct: 177 RHAGLSLLVIDATAPGVSRGAPMKKIGLHIQEACEIFFDDVRVPAANLLGEVGQGFTYLT 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           S  P E M I +   S+  SV      + + + Y   R   G  L      K  +AD A 
Sbjct: 237 SHLPQERMSISVNAQSSAASV------VTQTVEYVNGRKAFGKTLSHFQNTKFVLADCAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A  A+  R   + D  +    +AA  ++       +  +M   V+   ++  GG GY
Sbjct: 291 QVEAGWAMLDRALVALDAGELTPTDAAKVKL-------FVTEMQGRVVDACLQLFGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR + ++    I  GS   M
Sbjct: 344 MTEYPVARAWADARVGRIYGGSSEIM 369


>gi|258578057|ref|XP_002543210.1| hypothetical protein UREG_02726 [Uncinocarpus reesii 1704]
 gi|237903476|gb|EEP77877.1| hypothetical protein UREG_02726 [Uncinocarpus reesii 1704]
          Length = 543

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++++T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 267 ICLAITEPDAGSDVSSLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGENGMN 326

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +    G+  +R+  + G  S+ T  + F         D+ V   PVE++    
Sbjct: 327 GVSVLLIERDFGGVSTRRMDCQ-GVWSSGTTYITFE--------DVKV---PVENLIGKE 374

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I  +   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 375 NKGFKVIMTNFNHERVGIIIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 434

Query: 363 ALDIAAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAM 416
           A  I A+      + ++  N  D   S     A A + A  T    +C + A  +     
Sbjct: 435 ARQIEASYNWLENIIYQCQNYDDMEASLRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 494

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG G      + R YR+  A +I  GS   M+
Sbjct: 495 YSRGGQG----GKVERLYRDVRAYAIPGGSEEIML 525


>gi|226291326|gb|EEH46754.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 438

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 52/319 (16%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-Y 226
           P V K  +P++  R + P      ++T +AI    TE   G+D+A IT++  K +DG  Y
Sbjct: 133 PPVLKFGSPELQER-FLPDLLTCKKRTCIAI----TEPDAGSDVANITTRATKSADGKHY 187

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ--RLKNKIG---N 281
            ++G K ++++ +   +  +A   G  G            P+GL      LKN  G    
Sbjct: 188 IINGSKKWITNGIWADYTTMAVRTGGPG------------PSGLSIMVVPLKNYHGVTMR 235

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSG 327
           R + T +     TF   L D+ V   PVE+        MK ++       L   I     
Sbjct: 236 RFSVTGQACSGTTF-IELDDVKV---PVENLIGQEGMGMKYIMTNFNHERLTITIAVTRQ 291

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA----LSFRLAN-SFDE 382
            RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ A  A      ++L N S ++
Sbjct: 292 ARVALSAAFGYCLKREAFGKTLMDQPVVRHRLAKAGAELEAMWAWVEQFLYQLNNMSKEQ 351

Query: 383 AKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           A  R     A A+  A +    C ++A  +   +     G G I ER     YRE P   
Sbjct: 352 ADFRLGGLTALAKAKAGMVLNECAQVAVLLFGGSGLTRTGQGEIAERI----YREVPGAR 407

Query: 442 ILLGSGNAMV-LDVLNLLE 459
           I  GS + ++ L V  L++
Sbjct: 408 IPGGSEDVLLDLSVRQLVK 426


>gi|198428582|ref|XP_002126870.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           [Ciona intestinalis]
          Length = 451

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 17/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA--QVEGRVGCF 256
           + +TE   G+D+  + +  +K  D  + L+G K F+++  M+D  I++A    E +    
Sbjct: 188 IAMTEPGAGSDLQGVRTFAKKDGDD-WVLNGSKVFITNGWMADVVIVVAITDKEAKSAAH 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDM 312
            +   L DG   G    +   K+G R+  T EL F +    +   L G   ++ G  + M
Sbjct: 247 GISLFLVDGDNPGFIKGKKLKKMGLRAQDTAELFFEDCRLPSSALLGGKAGLNAGFYQLM 306

Query: 313 KILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L      I  + ++       E   Y ++R   G  L     +K  +A+I  + A A 
Sbjct: 307 QELPQERLLISNLCMAACEFMFEETRDYVKQRKAFGKTLSKLQTIKHTLAEIKTETAVAR 366

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R  +  ++ K  +  A+ A       KY+   +   V    ++  GG GY+ E  I
Sbjct: 367 GFLDRCNDLHNQRKLDTSTASMA-------KYYVTDLNNTVAYRCVQLHGGWGYMWEYPI 419

Query: 431 ARHYRESPANSILLGSGNAM 450
            + Y ++   +I  GS   M
Sbjct: 420 CKAYVDARVQTIYGGSNEIM 439


>gi|194751229|ref|XP_001957929.1| GF10656 [Drosophila ananassae]
 gi|190625211|gb|EDV40735.1| GF10656 [Drosophila ananassae]
          Length = 420

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 25/258 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D+A I ++ +K  D  Y ++G K W  +  +++ + +LA+      C    
Sbjct: 155 GVTEPGAGSDVAGIKTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTNPDPKCPPSK 213

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI 
Sbjct: 214 AFTGFIVERDTP-GLTPGRKELNMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIA 269

Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   D     V+   V LA     EA+ Y+  R   G  +     ++  +AD+A+ +  +
Sbjct: 270 MGTFDKTRPPVAAGAVGLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGVETS 329

Query: 370 TALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L++RL A   D+ +  S  A+ A+  A         +A  + ++A++  GG+G+  + 
Sbjct: 330 R-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADVANKIASDAVQIFGGNGFNSDY 381

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 382 PVEKLMRDAKIYQIYEGT 399


>gi|196008093|ref|XP_002113912.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190582931|gb|EDV23002.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 357

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 19/250 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           P   T   IG  GLTE   G+D  ++ ++    +D   Y L+G K W  +SP++D FI+ 
Sbjct: 87  PKLATGQMIGCFGLTEPNHGSDPGSMETRATFNTDKKCYVLNGTKSWITNSPVADLFIIW 146

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A++EG++  F    +LE G   GL    +K K   R++ T ++   N       +L  + 
Sbjct: 147 AKLEGKIRGF----ILEKGM-TGLSAPYIKGKFSLRASPTGQIVMENVEVPENNILPHVE 201

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP   +    Y   A  ++      L     Y   R   G  L    +M+  +A++ 
Sbjct: 202 GLKGPFSCLNNARY-GIAWGALGAAEFCLDFVRQYTIDRKQFGRALASNQIMQLKMANM- 259

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                 T +S  L       + + +  A   +++ I +  C K A  +   A + +GG+G
Sbjct: 260 -----LTEISLGLQGCLQVGRLKDKNFATPEMVSMIKRNSCGK-ALEIARTARDMLGGNG 313

Query: 424 YIEERSIARH 433
             +E  + RH
Sbjct: 314 ICDEYHVIRH 323


>gi|307545013|ref|YP_003897492.1| butyryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307217037|emb|CBV42307.1| butyryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 388

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 16/258 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D A++ ++  +  D  Y ++G K F+S +  ++  +++A+  E   G   V 
Sbjct: 124 LTEPGAGSDAASLRTRAVRDGDD-YVINGSKMFISGAGATEVLVVMARTGEPDSGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            LL      G+ Y + + K+G +S  T  + F +     G  LG  N   G    MK L 
Sbjct: 183 ALLVPADAEGIEYGKNEQKMGWKSQPTRLVSFDDVRVPVGNRLG--NEGEGFKFAMKGLD 240

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+   + +L  +  Y   R   G  L     ++  IAD+A ++ AA  +  
Sbjct: 241 GGRLNIASCSLGAAQHALTLSRDYLAERKQFGRELSSFQALQFKIADMASELTAARLMVR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D+   +  EA     MA   K +   +   V  EA++  GG GYI E  + R  
Sbjct: 301 HAAWRLDQ---QDPEATAHCAMA---KRFATDVGFNVCNEALQLHGGYGYIREYPLERLV 354

Query: 435 RESPANSILLGSGNAMVL 452
           R++  + IL G+   M L
Sbjct: 355 RDTRVHQILEGTNEIMRL 372


>gi|301059403|ref|ZP_07200325.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
 gi|300446484|gb|EFK10327.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
          Length = 594

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 55/279 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D     ++     DG  Y ++G K F+++   +  F++ A+V G     F+V
Sbjct: 148 LTEPGAGSDALNAKTKAVLSEDGTKYIINGEKIFITNAGWASTFVVYAKVNGEDFTGFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +  +     G+   + + K+G   ++T  + F +           +  PVE++   I  
Sbjct: 208 EKDFK-----GVSTGKEEKKMGMHGSSTRPVIFED-----------AEVPVENVLYEIGK 251

Query: 319 DSAI--------------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAI 359
              I               +V G +  + EA+ YA  R     I    P+     +K  +
Sbjct: 252 GHKIAFNILNLGRWKLGAFTVGGCKGCITEAVKYANGR-----IQFKVPISSFGLIKTKL 306

Query: 360 ADIALDIAAATALSFRLANSFD--------EAKSRSEEAAYA----RIMAPITKYWCCKM 407
           AD+A+    + ++ +RLA  FD        EAK    E A A         ITK +  + 
Sbjct: 307 ADMAVKTFMSDSMMYRLAGMFDGKLETLPAEAKKSGTENAKAIEEYAAECSITKVYGSEA 366

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + E ++ +GG G+  E    R+YR+S  N I  G+
Sbjct: 367 LDFCVDEYVQILGGYGFCAEYPAERYYRDSRINRIWEGT 405


>gi|288922869|ref|ZP_06417033.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345795|gb|EFC80160.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 383

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 34/282 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P+  +  A+G  GLTE   G+D A  T    ++  G + ++G K F+++  +D   ++  
Sbjct: 113 PVLASGRALGAFGLTEPGAGSD-AGGTRTTARLEGGEWVINGSKAFITNSGTDITRVVTV 171

Query: 249 -------VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                  V GR  +   +VP +   G   G  Y    +K+G  ++ T  L F +     +
Sbjct: 172 TAVTGEPVNGRPQISSIIVP-VPTPGFSAGAPY----SKVGWHASDTRPLSFQDV---RV 223

Query: 300 GDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
            + N+   P       L  LD   +++S + V LA     E++ YA+ R   G      P
Sbjct: 224 PEANLLGEPGRGYANFLSILDEGRIAISALSVGLAQACVDESVKYAKEREAFGA-----P 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +     IA  +A     +F    ++ EA  R       +  A + K +  + A     
Sbjct: 279 IARNQA--IAFKLAEMETRTFVARTAYYEAAWRMLAGLPFKKEAAMAKLFSSEAAVTNAR 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           EA +  GG G++ E  +ARH+R+S    + +G G + V  +L
Sbjct: 337 EATQIHGGYGFMNEYPVARHWRDS--KILEIGEGTSEVQKML 376


>gi|167572409|ref|ZP_02365283.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 377

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 41/272 (15%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQ 248
           T   IG   LTE + G++   + ++ + + DG + L+G K F++    + ++  F M   
Sbjct: 116 TGKTIGAFSLTEPQAGSEAHNLRTRAE-LRDGRWILNGSKQFVTNGARAGLAIVFAMTDP 174

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            EG+ G   FLVP         G    + + K+G R++ T  +   N    ++   N+  
Sbjct: 175 DEGKRGLSAFLVP-----ADTPGFIVGKPEKKMGIRASDTCPITLENC---VIPQENLLG 226

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-EAI-----------HYARRRHVSGGILIDQPV 354
              E +KI      A+ ++ G R+ +A +AI            YAR R   G  + +   
Sbjct: 227 KRGEGLKI------ALSNLEGGRIGIAAQAIGIARAAFDRARRYARERVQFGKPIAEHQA 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A           EA+ A++ A        +MA AV ++
Sbjct: 281 IAEKLADMATQINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSD 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG G++ +  + RHYR++    I  G+
Sbjct: 334 AIQIHGGYGFLVDYEVERHYRDARITQIYEGT 365


>gi|331647186|ref|ZP_08348280.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
 gi|331043969|gb|EGI16105.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
          Length = 401

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIGNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|331246186|ref|XP_003335727.1| acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309314717|gb|EFP91308.1| acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 444

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 20/246 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
           L ++E   G+D+ ++     K  +G Y L+G K W  + P +   ++ A+    +    +
Sbjct: 182 LAMSEAGSGSDVVSMRLTAVK-KEGRYILNGTKFWITNGPDASTLVVYAKTSPEKAHRGI 240

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              L+E   P    +Q+L +K+G R + T EL F N     + + NV     + +++L+ 
Sbjct: 241 TAFLIESNFPGFSTHQKL-DKLGMRGSNTCELVFENC---EVPEENVLGEVDKGVQVLMS 296

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +SG     M+ +   A+ Y   R   G  +    +++  IAD+   + A+ +
Sbjct: 297 GLDLERLVLSGGPLGLMQAAFDVALPYVHERKQFGKPIGTFQLLQGKIADMYTKLNASRS 356

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +  + D  K    + A A +       +    A  V  +AM+ +GG+GYI +    
Sbjct: 357 YVYAVGRACDLGKVSRRDCAGAIL-------YSSDRALEVATDAMQMLGGNGYINDYPTG 409

Query: 432 RHYRES 437
           R +R++
Sbjct: 410 RIFRDA 415


>gi|262280197|ref|ZP_06057981.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257975|gb|EEY76709.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 130/328 (39%), Gaps = 40/328 (12%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--------KDWAPKIFSREYDPTNKAP 190
           RLY M  +E       S T  S+ + +    V+        + W PK+ + E        
Sbjct: 79  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYVNNFGNEEQKQKWLPKMATGE-------- 130

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
                V   + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  +++ +
Sbjct: 131 -----VVTAIAMTEPGTGSDLQAVRTTA--VLDGDDYVINGSKIFITNGYLCDMVVVVCK 183

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 G   +  ++ +    G    +  NKIG +   T EL F N       LLG    
Sbjct: 184 TGNNDKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG--ME 241

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  MK L +  +  AI+  +G   + A  + Y + R   G  +      +  +A++
Sbjct: 242 GMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKHIGAFQNTRFKLAEL 301

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I        R      E K   E AA A       KY    M   ++ E ++  GG 
Sbjct: 302 RTEIDFCRTYLDRCMELQLEEKLSVEAAAAA-------KYKISDMFSKIVDECLQLHGGY 354

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y +  AN I  G+   M
Sbjct: 355 GYMLEYPIARAYIDHRANRIYAGTNEIM 382


>gi|47522898|ref|NP_999204.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Sus scrofa]
 gi|1127798|gb|AAA83759.1| medium-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 421

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV TG     KI +
Sbjct: 219 FTGFIVEADTP-GVQIGRKEINMGQRCSDTRGIVFEDV---RVPKENVLTGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    SV+   V LA     EA  YA  R   G +L +   +   +AD+A+ +  A 
Sbjct: 275 GTFDKTRPSVAAGAVGLAQRALDEATKYALGRKTFGKLLAEHQGISFLLADMAMKVDLAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 335 LSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAVQVFGGNGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|94309048|ref|YP_582258.1| isovaleryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93352900|gb|ABF06989.1| isovaleryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 393

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 7/251 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +     D  Y L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADFKGD-RYVLNGTKMWITNGPDCDVLVVYAKTEPDLGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F +    +   L    G  + +   +  
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPVENILGAENGGAKVLMSGLDY 247

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           + A++S   V  M+  +     Y   R   G  + +  +++  +AD+   + AA +  + 
Sbjct: 248 ERAVLSGGPVGIMQACMDVITPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + D   +           A I   +  + A  +  E+++ +GG+GYI E  + R +R
Sbjct: 308 VGKNLDSLGTDHVRQVRKDCAAVI--LYTAEKATWMAGESVQILGGNGYINEYPVGRLWR 365

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 366 DAKLYEIGAGT 376


>gi|324998923|ref|ZP_08120035.1| long-chain-acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 41/270 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVG 254
           + +TE   G+D+A +T++ ++  D  + L G K F++  ++   +++    G     R G
Sbjct: 127 IAMTEPGTGSDLAGMTTRARRAGD-RFVLDGAKTFITGGINCDLVLVVARTGNSENRRQG 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300
             L+  ++EDG P G    R  +K+G  +  T EL F                 F +L G
Sbjct: 186 LSLL--VVEDGMP-GFTRGRKLDKLGLHTQDTAELFFDGVEVPEDNLLGEEGQAFTYLTG 242

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +L     P E       L  A+ +V+    +L   + Y + R V G  L      +  +A
Sbjct: 243 NL-----PQE------RLAIALGAVAAAETALDTTVGYVKEREVFGSSLAGFQNTRFELA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             A ++ A  A+        D +    + A  +   A   K +C ++   V+   ++  G
Sbjct: 292 ACAAEVMAGRAM-------LDRSLVDHDRAELSAADAAALKLFCTELQGRVLDRCLQLFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GYI +  IAR Y ++  + I  G+   M
Sbjct: 345 GYGYIRDYPIARLYADARVSRIYGGTSEVM 374


>gi|300741381|ref|ZP_07071402.1| acyl-CoA dehydrogenase [Rothia dentocariosa M567]
 gi|300380566|gb|EFJ77128.1| acyl-CoA dehydrogenase [Rothia dentocariosa M567]
          Length = 386

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 26/245 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR-------- 252
            TE   G+D+ A  +   +  +  Y L+G K F+ S +S DA ++LA+ +G         
Sbjct: 129 FTEPGAGSDLRACRTSAVR-DENSYLLNGQKTFIGSGISGDAALVLARTDGSSERASEDS 187

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
              F V +   DG   G    R  +KIG R++ T EL F N       L+G+       +
Sbjct: 188 FSLFFVEK--SDGYAPG----RQLDKIGIRASDTAELFFENVRVPAENLIGEPGQGLTYI 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +       L  A  S    R +L   + Y + R V G  + D    +  +A+  ++   +
Sbjct: 242 KQHLPQARLAIAAASAVISRTTLNATLEYVKERKVFGSRVADFQNTRFELANALMNTELS 301

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R   +F+  +  +E+AA A++ A        + A  +    ++  GG GYI E  
Sbjct: 302 ELYVARSIAAFNAGELTAEDAAKAKVFA-------SEKACTITDRCLQLFGGYGYINEHP 354

Query: 430 IARHY 434
           +A+ +
Sbjct: 355 VAQAF 359


>gi|291484854|dbj|BAI85929.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. natto BEST195]
          Length = 379

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 115/279 (41%), Gaps = 40/279 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL 257
           LTE   G+D  ++ +   K  +G Y L+G K F+++   +D +I  A     +GR G  +
Sbjct: 123 LTEPHSGSDAGSLRTTAIK-KNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
              ++E  +P G    + + K+G   + T EL F N               F   + +LN
Sbjct: 180 SAFIVEKNTP-GFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLN 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V             +  A  S+     +L  A+ YA++R   G  +     +   +AD+A
Sbjct: 239 VGR-----------IGIAAQSLGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L +  A+  +   +  +EA+ A       K +    A     +A++  GG G
Sbjct: 288 TRAEAARHLVYHAADLHNRGLNCGKEASMA-------KQFASDAAVKAALDAVQIYGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           Y+++  + R  R++    I  G+     L +   L  GT
Sbjct: 341 YMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLGGT 379


>gi|300778334|ref|ZP_07088192.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503844|gb|EFK34984.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 591

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/397 (20%), Positives = 167/397 (42%), Gaps = 75/397 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  ++  +D F + A+++    +  F+
Sbjct: 146 LTEPDAGSDANSGKTRAKLSEDGKHYIINGQKMWISNAGFADTFTLFAKIDDDKNITGFV 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           + +  E  +P  L +   ++K+G R+++T ++ F+              N F   L  LN
Sbjct: 206 INKS-ELENPESLTFGEEEHKLGIRASSTRQVFFNDMKIPVENLLGERNNGFKIALNALN 264

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V           I L +A +     R  L  +I Y+  R   G  +     +++ IA++A
Sbjct: 265 VGR---------IKLAAACLDAQ--RRILNHSIQYSNERKQFGVSISTFGAIRKKIAEMA 313

Query: 364 LDIAAATALSFRLA----NSFDE--AKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411
             +  + A S+R A    +  DE  A   S + A  +      +   I K +   +A   
Sbjct: 314 TGVFVSEAGSYRAAKNIQDKIDELVAAGLSHQEAELKGVEEFAVECSILKVFVSDLAQHT 373

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             E ++  GG G+ E+  +   +R+S  + I  G+     L  + +L K           
Sbjct: 374 ADEGIQVYGGMGFSEDTPMEAAWRDSRISRIYEGTNEINRLLAVGMLIK----------- 422

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGL--------ARFLTEKIALASSAAALYRAGMN 523
                  + K  + +L  ++++ KE  G+        + F++E+ A+ ++   ++     
Sbjct: 423 ------RAMKGELDLLSPAMAISKELMGIPSFEVPDYSEFMSEEKAIIANLKKVFLM--- 473

Query: 524 DIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            ++   L+   +D     H +L    NA+ I++ +Y+
Sbjct: 474 -VSGAALQKYMMDIEKQQHLLL----NASEILNQIYM 505


>gi|319783100|ref|YP_004142576.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317168988|gb|ADV12526.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 388

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVG--CF 256
           LTE   G+D AA+ ++  K S G Y L+G K F+S    SD + ++ +   +G  G    
Sbjct: 133 LTEPGSGSDAAALKTRAVK-SGGDYVLNGTKQFISGAGDSDVYAVMVRTGADGPKGISTI 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           +VPR        GL +   ++K+G    +T ++ F +       LL D     G      
Sbjct: 192 VVPR-----DAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSDEGAGFGIAMAGL 246

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD+  ++ AA    
Sbjct: 247 DGGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAARIFL 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A+  D       +A  A   + + K +       V  +A++ +GG GY+ +  I + 
Sbjct: 307 YAAASKLDR------KAPDAGKWSAMAKRFVTDTGFNVANDALQLLGGYGYLHDYGIEKL 360

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 361 VRDLRVHQILEGTNEIM 377


>gi|311109865|ref|YP_003982716.1| acyl-CoA dehydrogenase, N-terminal domain-containing protein 27
           [Achromobacter xylosoxidans A8]
 gi|310764554|gb|ADP20001.1| acyl-CoA dehydrogenase, N-terminal domain protein 27 [Achromobacter
           xylosoxidans A8]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQ 248
           S+ + + LTE   G+D AAI+++ ++  D  Y +SG K +++      +++       A 
Sbjct: 125 SIRMAIALTEPGAGSDAAAISTRAERCGD-RYVVSGQKLYITCAHVAHYLVAAVRTAPAN 183

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
                G   +  LL      G+   R+ + +G RS    E+   N       L+G+ N  
Sbjct: 184 DPAHAGHRGISMLLIPTDAPGVTI-RMLDTLGRRSTRATEIFLDNVEVPVENLIGEEN-- 240

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360
            G    MK L  ++   ++ +G   ++   I YA R + +  +   QP+     +    A
Sbjct: 241 RGWRGLMKCL-NMERLCLAAAGAG-NMQHVIDYA-RDYATQRVQFGQPISQFQAVAHKFA 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ +       L++R+A   D       E A A++++    + C  +        M+ +G
Sbjct: 298 DMRIKAETTRLLTYRVAEMLDAGIEPRIETAMAKVVSTENDFDCANL-------GMQIMG 350

Query: 421 GSGYIEERSIARHYRES 437
           G+GY+ E  + R +R+S
Sbjct: 351 GAGYMMEHDMQRFFRDS 367


>gi|226226698|ref|YP_002760804.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089889|dbj|BAH38334.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 394

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 116/268 (43%), Gaps = 23/268 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +  +     L+E   G+D  ++ +Q  +  D  + L+G K W      +   + +A+
Sbjct: 114 PMARGELLGAFCLSEPEAGSDAGSLATQAVREGDE-WVLNGTKAWVSHGNEAGVLLCMAR 172

Query: 249 VEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD- 301
            +    R G   +   +      G    + +NK+G R++ T+++   N       L+G+ 
Sbjct: 173 TDAPGARKGSKGISTFILTPDLPGFHLTKKENKLGLRASPTLQIVLDNCRVPADRLVGEE 232

Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              L  + G ++  ++ I    A  ++   R +L  +  YA  R   G  + +   ++  
Sbjct: 233 GRGLTYALGSLDHGRLGI----ASQAIGIARAALEASARYAGERKQFGKSIGEFQAIQFK 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L    A + +  +  +  ++ A++ A  T  W       V  +A++ 
Sbjct: 289 LADMATRITAARTLLHTAAAAKERGEKVTRYSSMAKLFATETAMW-------VTTQAVQI 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG GY+ +  + R+ R++    I  G+
Sbjct: 342 FGGYGYVTDYPVERYMRDAKVTEIYEGT 369


>gi|226361467|ref|YP_002779245.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239952|dbj|BAH50300.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 403

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 42/269 (15%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
           AP+    V     +TE     G+D +A+T++ +K+  G + ++GHK+F++ +  +  FI+
Sbjct: 121 APLAHGDVRSAFAMTEPSPGAGSDPSALTTRAEKVPGG-WKINGHKYFITGADGAGFFII 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSNTF-- 295
            A+  G  G       FL P   E     GL   R  + + +R+      E+ F + F  
Sbjct: 180 FARTSGVPGDRGGATMFLTPADAE-----GLTVGRHIDTL-DRAMIGGHCEVFFEDLFVP 233

Query: 296 -GFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
              +LG+++       V  GP     ++ +L +A       R     A+ +  +R   GG
Sbjct: 234 DSGVLGEVDQGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVAHVAQRDGFGG 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D  ++++ IAD  +DIAA  AL  R     D+    S   +       I K +  + 
Sbjct: 287 KLGDLGMVQKMIADNEIDIAATRALLTRACWELDQGGHASNSTS-------IAKTYAAEA 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRE 436
              ++  +++  GG G   +  +AR  RE
Sbjct: 340 IFRIVDNSVQMCGGLGVSGDLPLARLSRE 368


>gi|300934204|ref|ZP_07149460.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 394

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 23/251 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D+A++    ++  +  + L+G K W  +SP++D  ++  
Sbjct: 128 PRLATGELVGCFGLTEPGAGSDVASMQMHAKREGNE-WVLNGSKMWITNSPIADVLVVWT 186

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
           + E     F+V R    G+P+ L    ++ K+  R++ T E+   +   +    L  +N 
Sbjct: 187 RTEDGHAGFIVER----GTPD-LNTPEIRRKLSLRASITGEIVLDDCHISDAQRLPKVNS 241

Query: 305 STGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             GP+  +    Y    I+  ++   R SL   + Y   R V G  L    + +  +AD+
Sbjct: 242 LRGPLTCLNEARY---GIIWGALGAARDSLQTTLEYTAERPVFGRPLSSFQLTQAKLADM 298

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+++  +  L+ +L    D  + R    +  ++ +        ++A  +  E    +G +
Sbjct: 299 AVELNKSMLLALQLGRLKDRGELRPHHISAGKLNS-------TRVALDIARECRTLLGAA 351

Query: 423 GYIEERSIARH 433
           G   E S  RH
Sbjct: 352 GITTEYSPMRH 362


>gi|295101904|emb|CBK99449.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii L2-6]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 133/318 (41%), Gaps = 55/318 (17%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK---IS 222
           TP   + + PK+ S E+              +G  GLTE   GTD     +QGQ+   + 
Sbjct: 103 TPEQKEKYLPKLCSGEW--------------LGAFGLTEPGAGTD-----AQGQQTTAVE 143

Query: 223 DGIY-CLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQR 274
           DG Y  L+G K F+++   +D FI++A  +      GR        ++E   P G    +
Sbjct: 144 DGDYWVLNGSKIFITNAGYADVFIVIAVTDKVLDKKGRPTKLCSAFIVERTDP-GFSVGK 202

Query: 275 LKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            ++K+G R ++T EL F +         G       ++   ++  +I I    A  ++  
Sbjct: 203 AEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQLAMATLDGGRIGI----ASQALGI 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NSFDEA 383
              +L E + Y + R   G  +      +  +A++   I AA  L +  A     + + A
Sbjct: 259 AEGALQETVAYVKERKQFGRSISAFQNTQFELAEMKARIEAAKYLVYAAALKKQEAMNGA 318

Query: 384 KSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           K R S EAA A+++A  T       A  V    ++  GG GY  +  I R  R++    I
Sbjct: 319 KVRYSVEAAQAKLIAART-------ASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+    ++ +   L K
Sbjct: 372 YEGTSEVQMMVISGALLK 389


>gi|70731295|ref|YP_261036.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68345594|gb|AAY93200.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 387

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 113/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  + L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGDH-FVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKV------- 239

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+  +   + Y   R   G  + +  +++  IAD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + +  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACERGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|27378415|ref|NP_769944.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351563|dbj|BAC48569.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 387

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 26/269 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA- 247
           P  K      + +TE   G+D A+I++      D  + L+G K F+S   ++D  I++A 
Sbjct: 114 PTVKGDKICAMAITEPGAGSDAASISTTAHLEGDQ-WVLNGTKHFISDGDIADYVILMAL 172

Query: 248 -----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
                +  G +  FL  R    G+P G    R +  +G+R     EL F +       +L
Sbjct: 173 TDKEKRARGGITLFLADR----GTP-GFKVARTQPMMGHRGYGHAELAFEDCRIPKAAVL 227

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI--HYARRRHVSGGILIDQPVMKR 357
           G++      +    + I L        GM     E +  H   RR   G ++ D  ++++
Sbjct: 228 GEVGGGFKLIMQSVLQIRLAHIGARAVGMAQRALEMMRKHAGERRQF-GQLIGDFQMVQK 286

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD A +I     +    A   D+ +        AR    + K    +M   V+  A++
Sbjct: 287 LIADSATEIFGVKMMVMNAAWDIDQGRD-------ARDKVSMIKVAASEMQGRVVDRAIQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG G+ ++  + R YR++    I  G+
Sbjct: 340 VFGGMGFSKDLPLERMYRDARVTRIYDGT 368


>gi|238062332|ref|ZP_04607041.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884143|gb|EEP72971.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 386

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 15/247 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T  AIG  GLTE   G+D A++ ++ ++  D      G  W  ++P++D  ++ A+
Sbjct: 120 PPMATGEAIGCFGLTEPDHGSDPASMATRARRDGDDWLLHGGKMWITNAPVADVAVIWAR 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  V  F VP         G+  + ++ K+  R++ T E+   +        L  + G 
Sbjct: 180 AEEGVRGFAVPL-----DAPGVSVREMRRKMSLRASVTGEIALDDVRLPADALLPGAAGL 234

Query: 309 VEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L      I+  ++   R  L   + YA  R   G  L    + +  +AD+A++ 
Sbjct: 235 KAPLSCLTEARHGIVWGALGAARDCLETTLGYATTRTQFGRPLAGFQLTQAKLADMAVEW 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L+  L    D  + R E+ +       + K    + A A+  +    +G +G   
Sbjct: 295 QKGFLLALHLGRLADAGRLRPEQVS-------VGKLNNVREALAIARQCRTILGANGVSG 347

Query: 427 ERSIARH 433
           E  I RH
Sbjct: 348 EYPIMRH 354


>gi|284035946|ref|YP_003385876.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283815239|gb|ADB37077.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 402

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 27/282 (9%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S V++  +  ++  WA   F  E       P   T   IG  GLTE   G+D   + S  
Sbjct: 108 SCVSVQNSLVMYPIWA---FGSEAQRQKYLPRLATGELIGCFGLTEANHGSDPGGMESNF 164

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            + SD  Y L+G K W  ++ ++D  I+ A+  +G+V   +V R +E     G     +K
Sbjct: 165 IERSD-YYLLNGSKLWITNANIADIAIVWARNDQGKVRALIVERGME-----GFSTAEIK 218

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK   R++ T EL F +        L  S G    +K    L+ A   +S   +  A   
Sbjct: 219 NKWSLRASTTGELIFQDVQVPKENILPDSFGLKSALKC---LEQARYGISWGALGAAMEC 275

Query: 337 HYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +   RR+    I   +P+     +++ +A++  DI     L +RL    +E     + A 
Sbjct: 276 YEVARRYALERIQFGKPIASFQLVQKKLAEMLTDITQGQLLCWRLGVLKNE-----DRAT 330

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A+I   + K    +MA  V  EA + +G  G   E  I RH
Sbjct: 331 VAQI--SMAKRSNVEMALRVAREARQILGAMGISGEYPIMRH 370


>gi|60653459|gb|AAX29424.1| acyl-coenzyme A dehydrogenase C-4 to C-12 straight chain [synthetic
           construct]
          Length = 422

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 277

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 278 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 334 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 386

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 387 VEKLMRDAKIYQIYEGT 403


>gi|73986846|ref|XP_533901.2| PREDICTED: similar to Glutaryl-CoA dehydrogenase, mitochondrial
           precursor (GCD) [Canis familiaris]
          Length = 438

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y L+G K W  ++P++D F++ A+ E R    +
Sbjct: 177 FGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNAPVADLFVVWARCEDRS---I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R+++T       VE+   N    +L D++   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPKIEGKFSLRASSTGMIVMDGVEVPEEN----VLPDVSGLAGPFG 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  +
Sbjct: 289 ------CLNNARFGIAWGVLGAAEFCLHTARQYSLDRIQFGAPLARNQLIQKKLADMLTE 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 343 ITLGLHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGIS 395

Query: 426 EERSIARH 433
           +E  + RH
Sbjct: 396 DEYHVIRH 403


>gi|27379530|ref|NP_771059.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27352682|dbj|BAC49684.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 375

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 42/293 (14%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           PK+ S EY              +G L ++E   G+D+ ++  +  K  D  Y L+G K W
Sbjct: 102 PKLISGEY--------------VGALAMSEPGAGSDVVSMKLRADKRGD-RYVLNGSKMW 146

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +   +D  ++ A+ +   G   +   L +    G  + +  +K+G R         SN
Sbjct: 147 ITNGGDADVLVVYAKTDPEAGPRGMTAFLVEKGFKGFTHGQHLDKLGMRG--------SN 198

Query: 294 TFGFLLGDLNVSTGPV-----EDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRR 342
           T+     +  V    V     E +K+L+  LD     +SG     M   +   + Y   R
Sbjct: 199 TYPLFFDECEVPAENVLGKVGEGVKVLMSGLDYERTVLSGGPLGIMAACMDAVVPYMHER 258

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + D  +M+  +AD+     A  A  + +  + D    R++ A   R  A     
Sbjct: 259 KQFGQPIGDFQLMQGKLADMYATWQATRAYVYAVGRACD----RADHARTLRKDAAAAIL 314

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  + A  +  EA++ +GG GY  E  + R +R++    I  G+G + V  +L
Sbjct: 315 YSAEKATWMAGEAIQALGGVGYTSEFPVGRLWRDAKLYEI--GAGTSEVRRML 365


>gi|330911502|gb|EGH40012.1| acyl-CoA dehydrogenase [Escherichia coli AA86]
          Length = 383

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIGNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|39935207|ref|NP_947483.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649058|emb|CAE27579.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 104/264 (39%), Gaps = 28/264 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----G 254
           +G++E   G+D+A I +  +   D      G  W  +   +D   +L    EG V     
Sbjct: 123 IGVSEPGAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNTGEGPVHRNKS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTG 307
              VP         G+   R  +K+G RS+ T ++ F        N  G           
Sbjct: 183 LICVPM-----KTKGVTIARKLDKLGMRSSDTAQIYFDEVRVPKRNRIGEEGKGFTYQMV 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ ++      A   +     ++   I Y R R   G  L+D  V+   +A++  ++ 
Sbjct: 238 QFQEERLW----GAAACLKAHEKTIQNTIEYTRGRKAFGKPLLDNQVIHFRLAELQTEVE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              +L +R A +    +  ++ A  A++ A        ++   +    ++  GG G++ E
Sbjct: 294 LLRSLVYRAAEALVAGEDVTQLATMAKLKAG-------RLGREIPDACLQFWGGMGFMNE 346

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             ++R YR+S   +I  G+   M+
Sbjct: 347 TLVSRSYRDSRLTAIGGGADEVML 370


>gi|300245939|gb|ADJ94027.1| putative aromatic-degrading BamM [Clostridia bacterium enrichment
           culture clone BF]
          Length = 405

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 17/255 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D   I +  +K  D  Y L+G K W     ++D F++ A+   ++ CF+V
Sbjct: 133 FALSESEAGSDAWNIKATARKEGDH-YVLNGIKDWVSLIDVADNFLVFARTGKKISCFIV 191

Query: 259 PRL---LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            R    +E  S +G  Y R+ N  G      V +   N  G       V+   +++ +  
Sbjct: 192 ERNFPGVETQSLSGKMYIRVAN-TGQLLLNNVRVPRENLLGEEGEGKAVAASGMDNARFT 250

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +    A  SV  +   L   + YA+ R   G  + +  +++  I DI      A  L   
Sbjct: 251 V----AAGSVGLIHGCLNACVKYAQTRKSFGQPIGNFQLIQSKIVDITTSTKIARFLVQN 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +    +E +  + E A A       K++  K A    + A++  G + Y+ +  + R+ R
Sbjct: 307 VGRLMNEGQFYTRETAMA-------KWYATKKAFEAASHAIQIHGANAYLHDLPLERYLR 359

Query: 436 ESPANSILLGSGNAM 450
            +    I  G+   M
Sbjct: 360 NAKGAMIYTGTNEIM 374


>gi|294084491|ref|YP_003551249.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664064|gb|ADE39165.1| acyl-CoA dehydrogenase domain protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 14/282 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P  +      +  TE   G+D A+I ++  +  D  + L+G K F+S  + SD F++ A 
Sbjct: 113 PTVRGERTCSVAFTEPAAGSDAASIKTRAVRDGDD-WILNGAKHFISDGLYSDFFVVTAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
            +   G   +   + +   +G    R +  +G R  + VE+ F +   +   LLG     
Sbjct: 172 TDPDAGYNGISTFIVEKGMSGFNVGRDQPMMGLRGTSHVEMSFDDVRLSQAHLLGPEGKG 231

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                     + L       +G    + +  + +AR R   G  +    ++++ +AD A+
Sbjct: 232 LKMALSTLGRVRLAQVAARATGKATHIMDLMLEHARERKQFGAQIGTFQMVQQMLADSAM 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI A     ++ A+  D  +         R    + K    +M   V+  A++  GG GY
Sbjct: 292 DINATRLALWQTASRIDNGED-------PRANISMLKVQAAEMLGHVVDRAVQIFGGMGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNA-MVLDVLNLLEKGTNLF 465
             +  I R+YR++    I  G+     V+   +L++  T+L+
Sbjct: 345 CRDLPIERYYRDARIYRIYDGASEIHRVVMAKSLMKGDTSLY 386


>gi|291522057|emb|CBK80350.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 381

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 24/249 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCF 256
             LTE   G+D AA  ++     D  Y ++G K F+S+      D  I++A  E      
Sbjct: 121 FALTEPNAGSDAAAAKTKAIADGDD-YVINGSKCFISNMGPDEGDYVILIALTEPEKKTK 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
            +  ++ D    G    + ++K+G R+    EL F++       LLG             
Sbjct: 180 GMSAIIVDRDTPGFTVPKAEDKMGLRAAPVSELVFTDCRVPKTQLLGQEGKGFAIA---- 235

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + ++   V +AE     A+ Y+ +R   G  +     ++  +AD+A    A
Sbjct: 236 -MAGLDGGRIGMAAQAVGVAEGALDAAVDYSTQRIQFGKPINANQGIQWYLADMATQTEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+   A      KS ++EAA A       KY+  + A  V  ++++  GG GY+++ 
Sbjct: 295 AKALTLNAAALRQAGKSVNKEAAMA-------KYFASENAVKVAYQSLQIHGGYGYMKDY 347

Query: 429 SIARHYRES 437
           +I R YR++
Sbjct: 348 AIERMYRDA 356


>gi|291303847|ref|YP_003515125.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290573067|gb|ADD46032.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 39/274 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
            GLTE  GG+D  A  ++   + DG  + ++G K F+++  +D   F+ +  V G     
Sbjct: 123 FGLTEPDGGSDAGATKTR--AVLDGDEWVINGGKCFITNAGTDITEFVTVTAVTGTKPDG 180

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
              +   +VPR        G       +K+G  S+ T EL F +       LLG+     
Sbjct: 181 HKEISTIIVPR-----DTPGFTVGPKYSKVGWSSSDTRELFFDDCRVPAANLLGERGRGY 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 + L  LD   ++++ +   LA     E+I YA+ RH  G  + D   ++ AIAD
Sbjct: 236 -----AQFLRILDEGRIAIAALATGLAQGCVDESIRYAKERHAFGHPIGDFQAIQFAIAD 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + L      A + RL   +D A     +A + R  A I K      A      A +  GG
Sbjct: 291 MEL-----RAHTARL-GYYDAAARMRADAPFKR-QASIAKLHASNAAVDNSRAATQIFGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G++ E  +AR +R+S    + +G G + +  +L
Sbjct: 344 YGFMNETPVARMWRDS--KILEIGEGTSEIQRML 375


>gi|312195523|ref|YP_004015584.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311226859|gb|ADP79714.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 604

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 121/298 (40%), Gaps = 43/298 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252
           L+E + G+ ++ I ++ +   DG Y + G+K ++S+   +       ++LA++ G     
Sbjct: 170 LSEPQAGSSLSDIITRAEPRPDGSYRVFGNKMWISAGEHELGENIVHLVLAKIPGGPAGV 229

Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
             +  F+VP+ L +     G  N +    L +K+G R      L F              
Sbjct: 230 KGISLFVVPKFLVNTDGSVGERNDVVLAGLNHKMGYRGTTNTLLNFGEGKYTPGGEPGAI 289

Query: 296 GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---- 347
           G+L+G     L+     + + +I +   +  +  +G   SL  A    + R  +G     
Sbjct: 290 GYLVGQPHQGLSYMFTMMNEARIKVGAGAMALGYTGYLKSLKYAKERPQGRPPAGKDARA 349

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYARIM----AP 398
               +I+   ++R +      +  A AL        D+ ++   +EE   A ++     P
Sbjct: 350 PQIPIIEHADVRRMLLAQKSYVEGALALVLYAGKLLDDERTAPTAEERDRAHLLLDTLTP 409

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           I K W  +        A++  GG GY  E  +  H+R++  N I  G+     LD+L 
Sbjct: 410 IVKSWPSQWCLEANNLAIQIHGGYGYTREYDVELHFRDNRLNPIHEGTHGIQGLDLLG 467


>gi|229156673|ref|ZP_04284761.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           4342]
 gi|228626842|gb|EEK83581.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           4342]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQSVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLDHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|284032443|ref|YP_003382374.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283811736|gb|ADB33575.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 404

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254
           + +TE   G+D A+I +  ++  D  Y + G K F+++    DA ++ A ++  +G    
Sbjct: 134 MAITEPDCGSDSASIRTTARRDGDH-YVIDGEKIFVTAGGRCDAVVVWATLDRSLGRAAI 192

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGP 308
             F+VP+     +P GL  +RL +K+G RS+ T  L F N       LLG  D++   G 
Sbjct: 193 KSFVVPK----DTP-GLTVERLDHKLGIRSSDTATLRFENCRVPVENLLGSPDIDADKGF 247

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID-------QPVMKRAIA 360
              M+     D+    V+ M V  A A +   R      G+  D       QP    A  
Sbjct: 248 AGVMQT---FDNTRPLVASMAVGCARASLELTRELLAEAGVEPDYDRAVHLQPAAAAAYL 304

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  L+ + A   D  +  S +A+ A+  A        + A  +    +E  G
Sbjct: 305 QMEADWEAAYLLTLQAAWMADNGRPNSLQASMAKAKA-------GRAANDITLRCVELAG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R+S    I  G+
Sbjct: 358 SLGYSEHELLEKWARDSKILDIFEGT 383


>gi|184201741|ref|YP_001855948.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183581971|dbj|BAG30442.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 419

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 26/242 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           LTE   G+D   + S+   +  G Y L+G  KW  +  M    ++ A+ +  G V  F+V
Sbjct: 164 LTEPAHGSDSIGLESRATPVEGG-YILNGAKKWIGNGSMGGITVVWARSDEDGAVHGFVV 222

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316
           P+  E     G     +K K+  R+    E+   N F   +   NV        D   ++
Sbjct: 223 PQESE-----GYTGTTMKAKLALRAIHQAEITLENVF---VPTENVLPHAKNFRDTSAVL 274

Query: 317 Y---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   +  A  +V   +     A+HYA +RH  G  L    +++  +  +  ++     L 
Sbjct: 275 FATRIGVAWAAVGHAQACYETAVHYAMQRHQFGRPLAASQIVQERLTRMLSELTQIQTLV 334

Query: 374 FRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +A        R EEA   +   A + KY   + A  V   A + +GG+G + E  +AR
Sbjct: 335 MAMA--------RKEEAGTLSGPQASLAKYTATRTARQVAMNARDLLGGNGILMENRVAR 386

Query: 433 HY 434
           H+
Sbjct: 387 HF 388


>gi|224371583|ref|YP_002605747.1| Acd14 [Desulfobacterium autotrophicum HRM2]
 gi|223694300|gb|ACN17583.1| Acd14 [Desulfobacterium autotrophicum HRM2]
          Length = 381

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 42/271 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIML--AQVEG-RVGC 255
            GLTE   G+D  A+ ++     D  + L+G K F+++  + +A ++L  A++EG  +  
Sbjct: 123 FGLTEPDAGSDAGALITEAVSKGDE-WVLNGTKQFITNIGLENASVLLVAARLEGGDIAT 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
           F+VP+    G   G  Y+    K+  R +AT E+        +L D  +   P E++   
Sbjct: 182 FIVPKET-PGFKLGTKYE----KMAWRGSATHEV--------ILKDCTI---PKENLLGD 225

Query: 313 ------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 + L  L++  +S++ + V      L E++ YA  R   G  + +   ++  + D
Sbjct: 226 PKHGFSQHLAVLETGRISIAAVAVGAAQACLDESLRYAMGRKQFGKSIFEFQSIQFKLVD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ I  A     + A   D  K  + EA  A++ A        +MA  V ++A++  GG
Sbjct: 286 MAVAIELARNEYLKAAWLKDHGKKHTFEATCAKLYA-------SEMAEKVASDAVQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GY+E+  ++R Y+      I+ G+     L
Sbjct: 339 YGYMEDSPVSRIYKSVKLLQIVEGTSEVQRL 369


>gi|194213009|ref|XP_001503007.2| PREDICTED: similar to Isobutyryl-CoA dehydrogenase, mitochondrial
           precursor (Acyl-CoA dehydrogenase family member 8)
           (ACAD-8) (Activator-recruited cofactor 42 kDa component)
           (ARC42) [Equus caballus]
          Length = 377

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 46/270 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S +  SD ++++ +  G  G     C
Sbjct: 122 LTEPGSGSDAASLLTSAKRQGDH-YVLNGSKAFISGAGESDVYVVMCRT-GEPGPKGISC 179

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            +V    E G+P GL + + + K+G  S  T  + F +        +GD        E  
Sbjct: 180 IVV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGD--------EGQ 226

Query: 313 KILIYLDSAIMSVSGMRVSLAE---AIHYAR----RRHVS-----GGILIDQPVMKRAIA 360
             LI    A+  ++G R+++A       YA     R H++     G  L ++  ++  +A
Sbjct: 227 GFLI----AMKGLNGGRINVASCSLGAAYASVVLTRDHLNVRKQFGEPLANKQYLQFKLA 282

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + A+  L  R A     A +  EE   A  +  + K +      A+  +A++  G
Sbjct: 283 DMATRLVASR-LMIRSA-----AVALQEEREDAVALCSMAKLFATDECFAICNQALQMHG 336

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+++ +I ++ R+S  + IL GS   M
Sbjct: 337 GYGYLKDYAIQQYVRDSRVHQILEGSNEVM 366


>gi|251796773|ref|YP_003011504.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247544399|gb|ACT01418.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 365

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 23/232 (9%)

Query: 215 TSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           T +G+++   IY L G    LSS     ++D ++ L  ++ + G   +  +  D SP G+
Sbjct: 128 TLRGKRLGKDIYKLDGS---LSSVELAGIADDYVGL--IKHQTGGLSIGVVSGD-SP-GI 180

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-----VEDMKILIYLDSAIMSV 325
             +  ++K+G R     EL F +    L   +  ++G         + ++  + +A  + 
Sbjct: 181 ACEPSESKLGLRGMPNAELRFQSVNCSLFNAVKENSGAGARDIFNGINVMRDIGAAAQAT 240

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YA+ R   G  +  Q  +   +AD+A ++ A+  L +  A S D+  S
Sbjct: 241 GIAQGALDAALAYAKERTQFGKPIGRQQGIAFKLADMAANVEASRWLVYDAAWSIDKGLS 300

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            S +AA A++       +  K A A   EA++  GG GY+ E  + R+ R++
Sbjct: 301 GSAKAAMAKL-------YGIKHAVATAIEAVQVFGGYGYMREYRVERYLRDA 345


>gi|282866267|ref|ZP_06275313.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282558853|gb|EFB64409.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 368

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L G K W  ++ +S+ + ++A 
Sbjct: 102 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLDGVKRWITNAGVSEYYTVMAV 160

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+   N       ++G+    
Sbjct: 161 TDPTKRSKGISAFVVEKSDEGVSFGAPERKLGIKGSPTREVYLDNVRIPADRMIGEEG-- 218

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK L   D   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 219 TGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLA 275

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   +A          K +   +A  V  +A++ +G
Sbjct: 276 DMAMKIEAARQLTYAAA-----AKSERGDADLT-FQGAAAKCFASDVAMEVTTDAVQLLG 329

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 330 GYGYTRDYPVERMMRDAKITQIYEGT 355


>gi|260855518|ref|YP_003229409.1| putative acyl-CoA dehydrogenase [Escherichia coli O26:H11 str.
           11368]
 gi|257754167|dbj|BAI25669.1| predicted acyl-CoA dehydrogenase [Escherichia coli O26:H11 str.
           11368]
 gi|323153069|gb|EFZ39338.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           EPECa14]
          Length = 383

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+  +  I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRSERIGGGTDEIMI 369


>gi|258651115|ref|YP_003200271.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554340|gb|ACV77282.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 409

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 26/277 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ +P   + W P +          A + K        LTE + G+D  A+ +  ++ 
Sbjct: 122 INMLGSPEQKQRWLPGL----------ATLDKIGA---FALTEPQHGSDSVALETSARRD 168

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            D  + L+G K W  +  +    I+ A  + +G+V  F+V +  +   P G   + +  K
Sbjct: 169 GDH-WVLNGSKRWIGNGSIGHVVIVWARDEADGKVKGFVVEKDDQGAYPEGYTAELITGK 227

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAEA-I 336
           IG R+    ++   N        L  + G  +  ++L      A    +G  V+  EA +
Sbjct: 228 IGKRAIWQPDIVLDNVRVPEANRLAHANGFRDVSRVLTATRGGASWEAAGHAVAAYEAAL 287

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R      +    +++  +A +  +  A   + FR+A   ++ K           M
Sbjct: 288 TYATHRQQFSKPIAAYQLVQNKLATMLAETTAIQLMCFRMAQLQEQGKLTGP-------M 340

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           A + K +    A ++ AEA + +GG+G + +  +ARH
Sbjct: 341 ASMAKMYTASTARSICAEARDILGGNGLLLDFHVARH 377


>gi|226364009|ref|YP_002781791.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242498|dbj|BAH52846.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 378

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           + L+E   G+D+  +  + + + D  Y ++G K W  ++ +++  ++LA+ +        
Sbjct: 122 IALSEPGAGSDLGGVRIKAELVDDH-YVINGQKTWISAAHIAEHILLLARTDTSGNKHQG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+VP      +P GL    +K       N     + +     ++G  N +   +   
Sbjct: 181 LTLFMVP----TDTP-GLQIHEIKTMEARTCNDLYFTDVAVPVSAVVGTPNQAWRHLMRG 235

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A M++ G + SL + I +   R   G  +     ++  IAD+A +IA A + 
Sbjct: 236 LSVERLIIATMALGGAQRSLDDLIAFVTEREQFGHKISSFQAIRHRIADLATEIAFAKSF 295

Query: 373 SFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +A   D  E  + + E + A++        C ++A     EAM+ +GG GY  E  +
Sbjct: 296 VYEVAERIDAGEEDNLNREGSMAKLK-------CTEIAKKTALEAMQMMGGYGYTREYGM 348

Query: 431 ARHYRESPANSILLGS 446
               R S A  I  G+
Sbjct: 349 EEQVRRSLAPPIYGGT 364


>gi|215411124|ref|ZP_03419932.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis
           94_M4241A]
          Length = 445

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 47/280 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252
           LTE   G+D+ A  ++  +  DG + + G K F+S     +   + F ++LA+ EG    
Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223

Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299
              +  F VP  L D      G+ NG+    L++K+G +S+ T EL F        G+L+
Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           G   V  G  +   ++ +  +   + S   +      A+ +A+ R V G           
Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397
               ++  P ++R++           AL    A   D+A ++    A          ++ 
Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           PI K    + A  ++ E+++ +GGSG++ +  + ++ R++
Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDA 440


>gi|320173296|gb|EFW48502.1| Acyl-CoA dehydrogenase [Shigella dysenteriae CDC 74-1112]
          Length = 383

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERISGGTDEIMI 369


>gi|312796678|ref|YP_004029600.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312168453|emb|CBW75456.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 381

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 20/254 (7%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D+ ++ +Q  +  D  Y L+G K +++ +P++D  ++ A ++  +G   V   
Sbjct: 128 TEDEAGSDVFSMRTQAIRDGDS-YVLNGSKTYITNAPIADLCVVYATIDPTLGPLGVTAF 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           L + +  GL       K+G R+     +   +       +LG         E    + Y 
Sbjct: 187 LVETTNPGLELSPPLEKMGLRTAQMGRITLKDCRVPADAILGREGRGVKVFE--SAMEYE 244

Query: 319 DSAIMSVS--GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I++ +   MR  L   I +AR R   G  +     +   +AD+ +++ AA  L +R+
Sbjct: 245 RGCILATTLGAMRRHLEACITHARTRRQFGQPIGKHQAVSHRLADMKVNLDAACELVYRV 304

Query: 377 ANSFDEAKSRSEEAAYARIMA--PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               D  K  + EAA A++      TK+           +A+   G  GY+ E S  R  
Sbjct: 305 GRLKDAGKDATLEAACAKLFVSEAYTKFSI---------DALRIYGAQGYLAETSTERGL 355

Query: 435 RESPANSILLGSGN 448
           R++ A+ +  G+ +
Sbjct: 356 RDAIASLLYSGTSD 369


>gi|291563714|emb|CBL42530.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SS3/4]
          Length = 378

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D +A  +   K  D  Y L+G K F+++  ++  + + A  +   G   +  
Sbjct: 123 LTEPGAGSDASAGKTTAVKDGDE-YVLNGRKCFITNGGVASFYCVTAMTDKSKGVKGISM 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            L D    GL     +NK+G R++ T ++ F +       L+G+     G    MK L  
Sbjct: 182 FLVDAGTPGLSTGHEENKMGIRTSNTCDVVFEDCRIPAANLIGEEGKGFGIA--MKTLDQ 239

Query: 318 LDSAIMSV-SGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +  V +G+ +  + EA+ Y + R   G  +I    ++  +AD+ +    A  +   
Sbjct: 240 ARAWMGCVATGIAQRGINEAVAYGKERIQFGKPIIKNQALQFKVADMEIKTETARQMVAH 299

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D     ++E+A       I K +   +A  V +EA++  GG GY  E  + +  R
Sbjct: 300 ALTKMDMGLPYTKESA-------IAKCYASDIAMEVASEAIQMFGGYGYSREYPVEKLLR 352

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           ++    I  G+     + V N
Sbjct: 353 DAKIFQIFEGTNEVQRIVVAN 373


>gi|240170897|ref|ZP_04749556.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 40/267 (14%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
            P+    V     LTE   G++ A + ++  + S G + +SG K F++ +P++  F++ A
Sbjct: 113 GPIASGDVVASFALTEPGAGSNPAGLRTKAVRDS-GNWVISGQKRFITNAPVAGLFVVFA 171

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +          +  FLVP         G+       K+G     T ++ F+        D
Sbjct: 172 RTRPADEQGAGIAVFLVP-----ADTAGVEVGAKDAKMGQEGAWTADVNFN--------D 218

Query: 302 LNVST----GPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           + V      G  ED+     L S        A ++V   + +L E++ YA      G  +
Sbjct: 219 VRVGAEALIGGTEDIGYRAALTSLARGRVHIAAIAVGTAQRALDESVAYATTATQGGTPI 278

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +++  +AD    + A  AL    A  +   + R       RI     K +C +MA 
Sbjct: 279 GNFQLVQAMLADQQTGVLAGRALVRDAARLWVSGEDR-------RIAPSAAKLFCTEMAG 331

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRE 436
            V   A++  GGSGY+    + R YR+
Sbjct: 332 KVADLAVQIHGGSGYMRGVPVERIYRD 358


>gi|239816229|ref|YP_002945139.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802806|gb|ACS19873.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 27/275 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV----EGRVGCF 256
           LTE   G+D  ++ ++ + +    Y ++G K F+S   S D  +++A+      G +  F
Sbjct: 124 LTEPGAGSDAGSLKTRAE-LQGAEYVINGGKAFISGAGSTDVLVLMARTGGGGAGGISAF 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VP         G+ Y + ++K+G  S  T  + F N     +   N+     E  +I +
Sbjct: 183 AVP-----ADAPGVSYGKKEHKMGWNSQPTRTINFDNV---RVPAENLLGKEGEGFRIAM 234

Query: 317 Y-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAAT 370
             LD   ++++   V  A+    A RR++       +P+     ++  +AD+A ++ AA 
Sbjct: 235 KGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPIASFQALQFKLADMATELVAAR 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +    A+  D         A A     + K +       V  +A++  GG GY+ E  +
Sbjct: 295 QMVRLAASKLDAGH------ADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPL 348

Query: 431 ARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464
            R  R++  + IL G+   M V+    LLE  +++
Sbjct: 349 ERLVRDTRVHQILEGTNEIMRVIVARKLLEGDSDI 383


>gi|116004093|ref|NP_001070404.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Bos
           taurus]
 gi|115305304|gb|AAI23881.1| Acyl-Coenzyme A dehydrogenase, long chain [Bos taurus]
 gi|296490369|gb|DAA32482.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Bos
           taurus]
          Length = 430

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 38/269 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA--QVEGRVGC 255
           + +TE   G+D+  I +  +K  DG  + L+G K F+++  + D  I++A    E     
Sbjct: 170 IAMTEPGAGSDLQGIRTNAKK--DGSDWILNGSKVFVTNGWLCDIVIIVAITNREAHSPA 227

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VST 306
             +   L +    G    R  +KIG ++  T E  F +     G LLG+ N      +  
Sbjct: 228 HGISLFLVENGMKGFIKGRKLDKIGLKAQDTAEFFFEDVRLPAGALLGEENKGYYYLMQE 287

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I      + ++VS       E   Y ++R   G  + D   +K  +A++   I
Sbjct: 288 LPQERLLI------SEIAVSASEFMFEETRDYVKQRKAFGKTVADLQTVKHKLAELKTSI 341

Query: 367 AAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               A     L        D A             A + KYW   +   V  + ++  GG
Sbjct: 342 CVTRAFVDSCLQLHRVKRLDVA------------TAAMAKYWASDLQNRVAYDCLQLHGG 389

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  IA+ Y ++   +I  G+   M
Sbjct: 390 WGYMFECPIAKAYVDARVQTIYGGTNEIM 418


>gi|17988206|ref|NP_540840.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|17983970|gb|AAL53104.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAMAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|228921748|ref|ZP_04085065.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228837960|gb|EEM83284.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 29/239 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   +  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWLLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P +++ I ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRKLIGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|254777397|ref|ZP_05218913.1| FadE3_2 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 405

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 41/310 (13%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++ L  T    + + P++ S E   T             + LTE  GG+D+
Sbjct: 106 MGGHTVVAKLLTLFGTEDQKQAYLPRMASGEIRAT-------------MALTEPGGGSDL 152

Query: 212 AAITSQG--QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLE 263
             +++       SD +       W  ++  S    +L + + +      PR      LL 
Sbjct: 153 QNMSTTALPDPDSDALVINGAKTWISNARRSGLIALLCKTDPKA----TPRHKGISILLV 208

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--L 318
           +  P GL   R   K+G +   + EL F N       +LG +    G  + MK L    +
Sbjct: 209 EHGP-GLTVSRDLPKLGYKGVESCELSFDNFRAPATAVLGGV-AGQGFSQMMKGLETGRI 266

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A 
Sbjct: 267 QVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAE 326

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +    EA  A++ A        ++A  +   A+   GG GY +E  + R++R++P
Sbjct: 327 RYDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAP 379

Query: 439 ANSILLGSGN 448
              +++G G 
Sbjct: 380 L--MIVGEGT 387


>gi|269126716|ref|YP_003300086.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311674|gb|ACY98048.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 409

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 131/318 (41%), Gaps = 55/318 (17%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAI 214
           +A+ VA   TP    +W P++F    D             I LG    +E   G+D+ +I
Sbjct: 100 AAASVAATGTPEQVGEWVPQMFGTPDD-------------IKLGAFCASEPDAGSDVGSI 146

Query: 215 TSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSP 267
            ++     +   + ++G K W  +  +++  +++A V   +G      F++P     G+P
Sbjct: 147 RTRAVYDEAKDEWVINGTKTWATNGGIANVHVVVASVYPELGSRGQASFIIP----PGTP 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------------- 314
                Q+ K K G R++ T E+   +    + G L V      D +I             
Sbjct: 203 GLRQGQKFK-KHGIRASHTAEVILEDV--RIPGRLIVGGKEKFDERIARVREGKRARGQA 259

Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L   ++   SV  M V +       A+ YA+ R   G  + D   +   +AD+   + A
Sbjct: 260 ALKTFETTRPSVGAMAVGVGRAAYEYALQYAQEREQFGRKIGDFQAIAFKLADMKTQLDA 319

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +R A    + K       +A     + K +  +M   V  EA++ +GG+GY  + 
Sbjct: 320 ARLMVWRAAWMARQGKE------FANAEGSMAKLFASEMCVRVTEEAIQILGGNGYTRDY 373

Query: 429 SIARHYRESPANSILLGS 446
            + R +R+S   +I  G+
Sbjct: 374 PVERMHRDSKIFTIFEGT 391


>gi|108798727|ref|YP_638924.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867845|ref|YP_937797.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434330|ref|YP_001070021.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108769146|gb|ABG07868.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693934|gb|ABL91007.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126234130|gb|ABN97530.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 397

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ ++   G Y + G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRARRDDSGGYVIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--- 308
             FLV  P    +  P GL      +K+G +   T EL F          L    G    
Sbjct: 189 TAFLVEKPTGFGEVMP-GLTIPGKLDKLGYKGIDTTELIFDGYRASAEDILGERPGQGFF 247

Query: 309 -----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                VE  ++ +   SA     G+R +   A+ YA++RH  G  + D   +   +A++A
Sbjct: 248 QMMDGVEVGRVNV---SARACGVGLR-AFELAVRYAQQRHTFGKPIADHQAIAFQLAEMA 303

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  +    A   D  +          + A + KY   +    V  ++    GG G
Sbjct: 304 TKVEAAHLMMVNAARLKDSGERND-------VAAGMAKYLASEFCAEVTQQSFRIHGGYG 356

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  I R  R++P   +L+G G + +
Sbjct: 357 YSKEYEIERLMRDAP--FLLIGEGTSEI 382


>gi|50086187|ref|YP_047697.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|49532163|emb|CAG69875.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 52/334 (15%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--------KDWAPKIFSREYDPTNKAP 190
           RLY M  +E       S T  S+ + +    +H        + W PK+ + E        
Sbjct: 79  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYIHNFGNEEQKQKWLPKMATGE-------- 130

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
                V   + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  +++ +
Sbjct: 131 -----VVTAIAMTEPGTGSDLQAVRTSA--VLDGDEYVINGSKIFITNGYLCDMAVVVCK 183

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 G   +  ++ +    G    +  NKIG +   T EL F N       LLG    
Sbjct: 184 TGNTDKGSANLSLIIVEADRAGFNKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG---- 239

Query: 305 STGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
               +E M  ++ +          AI+  +G   + A  + Y + R   G  +      +
Sbjct: 240 ----MEGMGFMMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGTFQNTR 295

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  +I    A   R      E +   + AA A       KY    M   V+ E +
Sbjct: 296 FKLAELRTEIDFCRAYLDRCMQLQLEEQLGIDAAAAA-------KYKISDMFSKVVDECL 348

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 349 QLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIM 382


>gi|94310790|ref|YP_584000.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354642|gb|ABF08731.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 619

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 57/311 (18%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ IT+    +G+      Y L G+K ++S+    +SD  +  +LA++ G 
Sbjct: 163 LSEPQAGSSLSDITTRADYEGESPLGQQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGP 222

Query: 253 VG----------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L  EDGS    N +    L +K+G R      L F      
Sbjct: 223 DGKLIPGVKGISLFIVPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKY 282

Query: 292 -----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                +   G+L+G+ +     +  M     +   + +V+        A+ YAR R    
Sbjct: 283 RPNGKAGAIGYLVGEPHKGLACMFHMMNEARIGVGLGAVALGYTGYLHALDYARNRPQGR 342

Query: 347 GI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAK 384
            +             L++   ++R +      +    AL+   A   D         EA+
Sbjct: 343 PVGPQGKDPASPQVKLVEHADVRRMLLAQKSYVEGGLALNLYCARLVDDEHAAKAAGEAE 402

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            + E +    I+ PI K W  +      + A++  GG GY  E ++ + YR++  N I  
Sbjct: 403 RQCELSLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHE 462

Query: 445 GSGNAMVLDVL 455
           G+     LD+L
Sbjct: 463 GTHGIQGLDLL 473


>gi|327404335|ref|YP_004345173.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327319843|gb|AEA44335.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 592

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 46/287 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  +   ++ F + A+++    +  FL
Sbjct: 146 LTEPSAGSDANSGKTKAALSPDGKHYIINGQKMWITNGGFANFFTVFAKIDDDKNLSAFL 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           V     +    G+     + K+G + ++T ++ F+N               F   L  LN
Sbjct: 206 V-----EADSEGISLNPEEKKMGIKGSSTRQVFFNNVKVPVENMLSERENGFKIALNILN 260

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +           I L + ++   G + ++ +++ YA  R   G ++     ++  IA+ A
Sbjct: 261 IGR---------IKLAAGVLG--GAKQTITDSVRYANEREQFGRMISKYGAIRYKIAEQA 309

Query: 364 LDIAAATALSFRLANSFDEA----KSRSEEAAYARI-----MAP---ITKYWCCKMAPAV 411
           +    A +  +R   + D+A     +   E   A +      AP   I K    +    V
Sbjct: 310 IRTYVAESAIYRAGQNIDDAIQAFVAGGMEKGQATLKGIEQFAPECAILKVAGSECLDYV 369

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E ++  GG GY  E S+ R YR+S  N I  G+     L +++++
Sbjct: 370 ADEGVQIFGGMGYSAESSVERGYRDSRINRIFEGTNEINRLLIVDMV 416


>gi|325833261|ref|ZP_08165767.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
 gi|325485643|gb|EGC88111.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
          Length = 395

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 31/287 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---- 246
            Q  +V     LTE+ GGT  A I +  +K  +G Y L+G KW +S      F  +    
Sbjct: 114 FQDKTVFTCFALTEQSGGTG-ADIHTTAEKDENGDYILNGEKWLISHTDCCEFAYVIAVT 172

Query: 247 ---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               Q + R+  F VP         G     + + +G R  A   L+F+N      +LLG
Sbjct: 173 DPEKQGDERLSAFFVP-----CDTPGYETTPMPHMMGARGAAHTGLKFTNMKLDKKYLLG 227

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    + ++   +   +  I   +  M    + +SLA     A  R   G  +  + ++K
Sbjct: 228 EEGQGMEIAIHSLSVSRAHIAASNLGMCQRMLEMSLAR----ANDRVTFGKPIATRQMIK 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           R IA++     A   + +     +D    +     Y    A + K +       V    +
Sbjct: 284 REIAEMQTYTHALRCMVYDFGREYD----KDPNGKYIEEKAAMCKLFSIYSTRIVSDGML 339

Query: 417 ECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  GG GY E+     + R YR++ A  +  G+ N   + +    +K
Sbjct: 340 EIFGGDGYFEDSPYGPVERMYRDARAMWLEEGAPNVQRITIARNCQK 386


>gi|281347020|gb|EFB22604.1| hypothetical protein PANDA_006042 [Ailuropoda melanoleuca]
          Length = 570

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D+A+I S+     D   Y L+G K W  +  M++ F + A+ E         
Sbjct: 130 LTEPSSGSDVASIKSRATLSEDKKHYILNGSKVWITNGGMANIFTVFAKTEVVDSDSSVK 189

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 190 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVRFENTRVPIENVLGEVGGGFK 244

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 245 VAMSTLNSGRF-----SMGSTVAGMLKKLIEMTAAYACTRKQFNKSLGEFGLIQEKFALM 299

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 300 AQKTYVMESMAYLTAGMLDQPGFPDCSIEAAMVKVFSSEGAWQC-------VSEALQVLG 352

Query: 421 GSGYIEERSIARHYRES 437
           G GY+ +    R  R+S
Sbjct: 353 GLGYMRDYPYERLLRDS 369


>gi|229167810|ref|ZP_04295542.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH621]
 gi|228615626|gb|EEK72719.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH621]
          Length = 382

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 106/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G+K     + ++G K F + +P+ D FI+ A +EG+  +G F++P+  
Sbjct: 136 RGGKPETLAVKKGEK-----WIINGRKTFTTMAPVLDYFIISASIEGQEDIGEFVIPK-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDS 320
              +  G+  +   + I  R  A+ +L   N         D+  S    + +  L+++ +
Sbjct: 189 ---NTQGVTIEETWDSIAMRGTASHDLVLQNVEIPDRFFTDIKGSKVKAKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A       KY     A +++ +AM  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELA-----AAKYVVTNAAISIVDKAMRIVGAKSLSEKNPLHRYY 355


>gi|215426250|ref|ZP_03424169.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
          Length = 294

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 36  LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 94

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 95  LLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSE 154

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATA--- 371
            +  A  + S  +  L     + R R   G  LI +  ++  +A++A  +D+A   A   
Sbjct: 155 RIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHV 214

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 215 VERQLAGETDLIA----QVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVE 263

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YR+     + +G G   +L  L
Sbjct: 264 RQYRD--MRILGIGGGTTEILTAL 285


>gi|239828624|ref|YP_002951248.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808917|gb|ACS25982.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 379

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 44/294 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223
           T    K + PK+ S EY                LG   LTE   G+D+ ++ ++  +  D
Sbjct: 102 TEEQKKKYVPKLSSGEY----------------LGAFCLTEPGAGSDVKSLKTKAVRQGD 145

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++   +D +I+ A+ +    G   +   + +    G    + + K+G 
Sbjct: 146 -YYILNGSKIFITNGGEADTYIVFARTDPNEKGSRGISAFIVEKDTPGFIIGKDEKKMGL 204

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-- 335
             + TV++   +       LLG+        +  KI +  LD   + ++   + +AEA  
Sbjct: 205 HGSRTVQITLEDAKVPAENLLGEEG------QGFKIAMANLDVGRIGIAAQSLGIAEAAL 258

Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                YA+ R   G  + +Q  +   +AD+A  + AA  L +  A    +     +EA+ 
Sbjct: 259 EHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLPCGKEASM 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++ A  T      M  A+  EA++  GG+GY ++  + R +R++    I  G+
Sbjct: 319 AKLFASRT-----AMENAI--EAVQIFGGNGYTKDYPVERLFRDAKICEIYEGT 365


>gi|116693605|ref|YP_839138.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|116651605|gb|ABK12245.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 384

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 21/264 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  + +    + ++E   G+D  A+++   +  DG + L+G K W   +  +D  I++A 
Sbjct: 120 PYARGATRAAMAISEPGAGSDPGALSTTAVRDGDG-WVLNGRKIWISHAAEADWTIVMAL 178

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LLGD 301
            +      G +  F+V R        G   +R    IG  S   + LE     G  LLG 
Sbjct: 179 TDRSKGKRGGMSAFIVDR-----DTPGFVIERRIPMIGGLSTYEIALEDCRIPGAQLLGR 233

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 P++       L+ A   +     ++A    +A++R   G  L ++  ++  +AD
Sbjct: 234 EGAGFAPMQSRLANRRLEMAAWCIGRAERAVALLCDHAKQRTTFGVPLAERQAVQWWVAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               I A   +++       EA +R +    AR    + K +  +MA  VI  AM+ +G 
Sbjct: 294 ALTQIHACRLMTY-------EAAARVDAGQDARTQISMVKVFATEMASTVIDHAMQTLGA 346

Query: 422 SGYIEERSIARHYRESPANSILLG 445
            G  +E  + +   E+    I  G
Sbjct: 347 MGMTKEMPLQQMASEARLMRIFEG 370


>gi|120403429|ref|YP_953258.1| long-chain-acyl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119956247|gb|ABM13252.1| Long-chain-acyl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 391

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 54/320 (16%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   V +  ++ L T  +  + W PK  S E             +   + +TE   G
Sbjct: 98  GFSLHNDVAAPYLIRLATEEQKQR-WLPKFCSGE-------------IISAIAMTEPGTG 143

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  +  D  Y L+G K F+++ + SD  I++AQ +   G      L+ +   
Sbjct: 144 SDLQGIKTRAVRDGDH-YVLNGAKTFITNGIHSDLVIVVAQTDPDKGALGFSLLVVERGM 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAI 322
            G    R  +KIG  +  T EL F+        D+ V   PVE++     +  IYL   +
Sbjct: 203 AGFERGRKLDKIGLDAQDTAELSFT--------DVKV---PVENLLGEEGQGFIYL---M 248

Query: 323 MSVSGMRVS------------LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            ++   R+S            L   + Y + R   G  +  Q   +  +A+++ +     
Sbjct: 249 QNLPQERISIAIMAAAAMEAVLDVTLQYTKERKAFGRPIGSQQNSRFLLAELSTEATVVR 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +         + K   E+AA A       K++  +    +I   ++  GG GY+ E  +
Sbjct: 309 MMVDEFIKLHLQDKLTVEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYDV 361

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR Y ++   +I  G+   M
Sbjct: 362 ARAYLDARVQTIYGGTTEIM 381


>gi|88704409|ref|ZP_01102123.1| isovaleryl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701460|gb|EAQ98565.1| isovaleryl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    ++  D  Y L+G K W  + P +D +++ A+ +   G   +
Sbjct: 130 LAMSEANAGSDVVSMKLNARREGDH-YVLNGTKMWITNGPDADIYVIYAKTDIDAGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G       +K+G R + T EL F +        L      VE +   +  
Sbjct: 189 TAFIVERDYPGFSRSPKLDKLGMRGSNTCELVFEDCIVPAENILREEGKGVEILMSGLDY 248

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  ++S   V  M+  + E + Y   R+  G  + +  +M+  +AD+  D+ A  +  + 
Sbjct: 249 ERTVLSGGPVGIMQACIDEVLPYLHTRNQFGQAIGEFQLMQGKLADMYADLNACRSYLYM 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  +   ++ A A I+      +  + A  +  + ++ +GG GY  E +  R  R
Sbjct: 309 VAAACDRGEETRQDCA-AVIL------YTAEKATQLALQTIQALGGYGYTNEANAGRLLR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKLYEIGAGT 372


>gi|317125699|ref|YP_004099811.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589787|gb|ADU49084.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 398

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I YA++R   G  ++D   +   +AD+A+ + A+  +  + A   D  +    EA  A 
Sbjct: 274 GIAYAQQREAFGKKIVDHQAVLFRLADMAVKVEASHEMMVKAARKKDSGERNDLEAGMA- 332

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 KY   +    V+ ++    GG GY +E  I R YRE+P   +L+G G A
Sbjct: 333 ------KYLASENCAQVVEDSFRIHGGYGYSKEYEIERLYREAPM--LLIGEGTA 379


>gi|313498363|gb|ADR59729.1| Acyl-CoA dehydrogenase domain protein [Pseudomonas putida BIRD-1]
          Length = 394

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 37/257 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGCF 256
           L LTE   G+D+ +IT+   +  D  + ++G K F+++      ++      V+   G  
Sbjct: 124 LCLTEPAAGSDLQSITTVASQ-DDSDFVINGTKIFVTNGERATLLLTLARTSVDAETGRP 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK--- 313
            +   L + S  G+  +   +K+      TVE+        LL  + V    V   K   
Sbjct: 183 RLSLFLVEKSFPGVTVESEFHKMAYTQVDTVEI--------LLSKVKVPATAVVGGKTGL 234

Query: 314 ----ILIYLDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILID--QPVMKRAIADI 362
               +L  L+   ++++   V     +LAEA  YA  R  S G+ ID  Q V  R +AD+
Sbjct: 235 GMRHLLDSLEVGRIAIAASAVGLAANALAEAKRYASERS-SFGVTIDKHQAVQLR-MADM 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  + AA  ++   A        R++EA + A +++ + K    + A  +  +A+   GG
Sbjct: 293 ATKLVAARLMTAEAA--------RAKEAGHRADMLSGMAKLLASESAKEICEDALRIHGG 344

Query: 422 SGYIEERSIARHYRESP 438
            GYI E  + R YRE+P
Sbjct: 345 YGYINEFPVERLYREAP 361


>gi|194375021|dbj|BAG62623.1| unnamed protein product [Homo sapiens]
          Length = 291

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 30  VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 88

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 89  FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 147

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 148 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 203

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 204 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 256

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 257 VEKLMRDAKIYQIYEGT 273


>gi|84501903|ref|ZP_01000061.1| Acyl-CoA dehydrogenase-like [Oceanicola batsensis HTCC2597]
 gi|84389898|gb|EAQ02532.1| Acyl-CoA dehydrogenase-like [Oceanicola batsensis HTCC2597]
          Length = 380

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 36/308 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           MVA  T   V K   P+   R   P          +   + ++E   G+D A+  ++ ++
Sbjct: 88  MVATFTAMNVEKFGTPEQKERYIQP-----FLDGDIRFSISISEPGAGSDAASTKTRARR 142

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFI--MLAQVE------GRVGCFLVPRLLEDGSPNGLCY 272
             +G + L+G K + S   +D  I  ML + +        +  FL+P   E     GL  
Sbjct: 143 DGNG-WALNGQKLWCSGAAADNAILAMLTRTDPDAPKHKGLSVFLIPNNTE-----GLDI 196

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           ++L   +  R+  T E+   +       LLG  N     + D   L  +  A   V   +
Sbjct: 197 RKLPT-MARRATGTTEIFVDDVKLPADALLGTENDGWKIITDHLELERVAVAAAYVGNAQ 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            ++ +A+ YA  R      + D  V++  +AD+   + AA  L +R A         S  
Sbjct: 256 TAVDDALRYAHERIQFDKPIFDFQVIRHMLADMQTQVDAARLLVYRAA---------SLA 306

Query: 390 AAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           AA    M  ++  K +  +    V    M+ +GG   + E  + R++RE   ++I  G G
Sbjct: 307 AAKTPCMREVSMAKLYASETLQTVTRNGMQILGGHSMLPEADMERYFREGMQSTI--GGG 364

Query: 448 NAMVLDVL 455
            + +   L
Sbjct: 365 TSQIQRTL 372


>gi|311108112|ref|YP_003980965.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762801|gb|ADP18250.1| acyl-CoA dehydrogenase, N-terminal domain protein 17 [Achromobacter
           xylosoxidans A8]
          Length = 391

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 33/271 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +      + ++E   G+++A + ++  K  D  Y L+G K W  +   +D  I++A+
Sbjct: 116 PLLRNERRTYVSISEPDVGSNVAEVKTRADKQGDH-YVLNGSKLWVTNGMFADFGIVVAR 174

Query: 249 V-----EGRVGCFLVPRLLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                 +G +  FLV +     D  P    + R        S  T    F N     +  
Sbjct: 175 TFSDTCQGGLSLFLVEKAHTRFDARPVDTMFVR--------STGTAAYTFDNA---QVPA 223

Query: 302 LNVSTGPVEDMK-ILI-----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            N+     E ++ ILI      L+ A+ +V   + +L  +I YAR R   G  +    ++
Sbjct: 224 ANLLGQEGEGLRQILIGLNFGRLNVAMGAVGAAQCALDLSIDYARTRKQFGQPIAAYQLV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R I ++ +   AA AL +R A +        +    AR+   + K +  + A  V   A
Sbjct: 284 QRHIVEMTMKTQAARALGYRAARAM-------QAGLPARVEGSVAKLYATEAAHQVANHA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GY  +  I R +R++    I  G+
Sbjct: 337 LQVHGGIGYATDYPIERIFRDTRGGMIPEGT 367


>gi|291299837|ref|YP_003511115.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569057|gb|ADD42022.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 385

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 49/343 (14%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +M +L  G      V S S+  + TT   + D A K   R++ P   +       A    
Sbjct: 72  VMEELGRGDSAVRGVVSVSLGLVGTTIARYGDDAQK---RQWLPRLTSGQDLGCFA---- 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE----GRVG-- 254
           LTE   G+D A +T++  +  D  + L+G K F+++  ++   ++ A+ +    G  G  
Sbjct: 125 LTEPDVGSDAAHLTTRAVRDGDD-WLLTGTKRFITNGTLASVALVFARTDPDEPGHRGIT 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307
            FLVP   E     G   + +  K+G R+ AT E          S   G L    +++  
Sbjct: 184 AFLVPTDAE-----GFGRKEIDGKLGLRAQATAEFHLDAVRVPDSARLGALGKGFSIA-- 236

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +  L    MSV+   V +A+     A+ YA+ R   G  +    +++  ++ I
Sbjct: 237 -------MAALAKGRMSVAAGCVGIAQGCLDAAVGYAKDRVQFGKPIAAHQLVQELLSGI 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+++ AA  L +R+A+  D    R  + A A  MA   K +  + A A   +A++  GG 
Sbjct: 290 AVNVDAARLLVWRVADHID----RGLDYAAASSMA---KLFASEAAVAAAGDALQVFGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GY++E  + ++ R++   ++  G+     L +   L  G N F
Sbjct: 343 GYVDEYPVGKYLRDARVMTLYEGTSQIQKLLIGRAL-TGINAF 384


>gi|196166809|gb|ACG70945.1| putative acyl-CoA dehydrogenase [Planobispora rosea]
          Length = 484

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 31/293 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    K W P+  S E             +   +G+TE  GG+D+AA+ +    + DG
Sbjct: 206 LTTEEQKKRWLPRFCSGE-------------MITAIGMTEPSGGSDLAALRTTA--VRDG 250

Query: 225 I-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + ++G K F+++   +D  ++ A+         +     +    G    R  +K+G  
Sbjct: 251 SDWIVNGSKTFITNGYCADLVVVAARTSPEKKAKGITLFAVETGMEGFTRGRKLDKVGQP 310

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIH 337
              T EL F N       ++G+++   G +  M+ L    L SA+ +++     LAE + 
Sbjct: 311 EADTAELFFENVRVPEENVIGEID--RGFIAMMERLPQERLGSAVANLAHAAAVLAETLV 368

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  +      K  +AD+   I  + A         D+  +   E   + + A
Sbjct: 369 YVRERKAFGQAVGSFQHNKFVLADLVTKIEVSQAF-------LDQCITAHTERELSAVDA 421

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              K W  ++   V+   ++  GG GY++E  +AR + ++    I  GS   M
Sbjct: 422 AKAKMWTSEVQGEVLDACVQLYGGYGYMKEYRVARAWMDARVTRIWAGSNEIM 474


>gi|183981284|ref|YP_001849575.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium marinum M]
 gi|183174610|gb|ACC39720.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium marinum M]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  A+ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAGAMRTRAKADGDD-WILNGTKCWITNGGKSSWYTVMAVTDPEKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHKDDEGFVVGPKERKLGIKGSPTTELYFENC--RVPGDRMIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKDRKQFGKSISDFQAVQFMLADMAMKVESARLMVYS 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E+    I A  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AA-----ARAERGESNLGFISAA-SKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|229490625|ref|ZP_04384463.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229322445|gb|EEN88228.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 387

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 49/285 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG------ 251
            GLTE   G+D A  T    K   G + ++G+K F+++  +D    + +  V G      
Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGVKDGGK 186

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   LVP      +  G   +   NK+G  ++ T  L F+        D+ V   P E
Sbjct: 187 KEISTILVPT-----TTPGFTAEPAYNKVGWNASDTHPLTFA--------DVRV---PEE 230

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           ++           L  LD   +++S + V  A     E+I YA+ R   G     +P+  
Sbjct: 231 NLLGERGRGYANFLRILDEGRIAISALSVGAAQGCVDESIKYAKEREAFG-----RPIGH 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                IA  IA   A +     ++ +A +        +  A I K    + A     +A 
Sbjct: 286 NQA--IAFKIARMEARAHVARTAYYDAAALMLSGKPFKKQASIAKLISSEAAMDNARDAT 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG G++ E ++ARHYR+S    + +G G   V  +L   E G
Sbjct: 344 QIHGGYGFMNEYAVARHYRDS--KILEIGEGTTEVQLMLIAREAG 386


>gi|218461253|ref|ZP_03501344.1| acyl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 376

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 55/294 (18%)

Query: 244 IMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ L       G+ N +    +++K+G   NAT  + + 
Sbjct: 7   LVLARIEGAPEGTKGISLFIVPKFLVGHDGALGARNTVSCGAIEHKMGIHGNATCVMNYD 66

Query: 293 NTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-- 346
              GFL+G     LN     + + ++++ L    +S     ++   A  YAR R + G  
Sbjct: 67  EATGFLIGAENRGLNAMFVMMNEARLMVGLQGIAIS----EIAYQNAAAYARDR-IQGRS 121

Query: 347 --GI---------LIDQPVMKRAIADI-ALDIAAA-----TALSFRLANSFDEAKSRSEE 389
             G+         +I  P ++R +  I A + A       TAL   +A+   + K R   
Sbjct: 122 LSGVKAPDKKADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTA 181

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ PI K             A +  GG GYIEE  ++++ R++    I  G+   
Sbjct: 182 DDILGLVTPILKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGI 241

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
             LD++     G  L             + G+  + + ++    C+E++G  +F
Sbjct: 242 QALDLV-----GRKLAL-----------NGGRAAMALFKEIGDFCEENRGDEKF 279


>gi|183981524|ref|YP_001849815.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium marinum M]
 gi|183174850|gb|ACC39960.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium marinum M]
          Length = 401

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L + +GR  +
Sbjct: 131 MAITEPAFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSKGRAAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL++K+G + + T  + F N       LLG   +  G   
Sbjct: 190 KSFIVPR-----EHPGVIVERLEHKLGIKGSDTAVIRFDNARIPKDNLLGKPEIEVGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPVMKRAIA-----DI 362
              ++   D+    V+ M V +  A +   R+     GI ID  +P   ++ A      +
Sbjct: 245 S-GVMETFDNTRPIVAAMAVGIGRAALEEIRKILTDAGIDIDYDRPAYTQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+       I+K    +MA  V  + +E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNKIPNSKEAS-------ISKAKAGRMASDVTLKVVELAGTT 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQLLLEKWGRDSKILDIFEGT 380


>gi|39976249|ref|XP_369515.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145011783|gb|EDJ96439.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 513

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 37/243 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A + +  +K +DG  Y ++G  KW  +    D F+   Q +  +  
Sbjct: 244 ICLAITEAFAGSDVANLRTTAKKTADGKHYIVNGTKKWITNGVFCDYFVAGVQTDKGLSV 303

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            ++ R        G+  Q++K    +R+  T  + F N     G LLG+        E+ 
Sbjct: 304 LIIER------GEGVETQQMKTSY-SRTAGTTYVTFDNVKVPVGHLLGE--------ENK 348

Query: 313 KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            I + L +           +V   R  + E + +A +R V G  LIDQPV++  +A +  
Sbjct: 349 GIYVILSNFNHERWTMTCGTVRYCRTIVEECLKWAHQRLVFGKRLIDQPVIRLKLAKMIA 408

Query: 365 DIAAATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            + +  +    +++++ +        SE++ +      + K    +MA  +  E+++  G
Sbjct: 409 LVESHQSWLETITYQMCHM-----PYSEQSKHLGGPIGLLKMSATRMAHEIADESVQIWG 463

Query: 421 GSG 423
           G G
Sbjct: 464 GRG 466


>gi|225558821|gb|EEH07104.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 548

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 272 ICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMN 331

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV---- 309
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N     +    
Sbjct: 332 GISVLLIERSAGGVGTRKMDCQ-GMATSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNF 390

Query: 310 --EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             E M I+I        V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 391 NHERMGIII------QCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHMARQIE 444

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 445 ASHNW---LENLVFQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 501

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 502 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 530


>gi|226305321|ref|YP_002765279.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184436|dbj|BAH32540.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 387

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 49/285 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG------ 251
            GLTE   G+D A  T    K   G + ++G+K F+++  +D    + +  V G      
Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGVKDGGK 186

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   LVP      +  G   +   NK+G  ++ T  L F+        D+ V   P E
Sbjct: 187 KEISTILVPT-----TTPGFTAEPAYNKVGWNASDTHPLTFA--------DVRV---PEE 230

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           ++           L  LD   +++S + V  A     E+I YA+ R   G     +P+  
Sbjct: 231 NLLGERGRGYANFLRILDEGRIAISALSVGAAQGCVDESIKYAKEREAFG-----RPIGH 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                IA  IA   A +     ++ +A +        +  A I K    + A     +A 
Sbjct: 286 NQA--IAFKIARMEARAHVARTAYYDAAALMLSGKPFKKQASIAKLISSEAAMDNARDAT 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG G++ E ++ARHYR+S    + +G G   V  +L   E G
Sbjct: 344 QIHGGYGFMNEYAVARHYRDS--KILEIGEGTTEVQLMLIAREAG 386


>gi|254500634|ref|ZP_05112785.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436705|gb|EEE43384.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 392

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/252 (19%), Positives = 110/252 (43%), Gaps = 11/252 (4%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + ++E   G+ +  +T++ +   D +      +W   +  SDA+++  ++    G   
Sbjct: 127 VAVSMSEPGAGSALTDLTTKARVEGDRVIVNGQKRWCSGAGHSDAYVVYCRMSDDPGAKG 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  +L +   +G  + + ++ +G R   + ++ F +       ++ V  G    +     
Sbjct: 187 IGAVLVEKGADGFTFGKREHHMGFRGVHSADMYFDDV-SVPAKNIIVPAGGFRKLMEAFD 245

Query: 318 LD---SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+   +  MS++  + +    + Y + R   G  +ID   ++  IAD+ + + AA  L +
Sbjct: 246 LERCGNTTMSLACAQSAFDYVLSYVQEREQFGKPIIDFQAVQLQIADMKMKLDAARLLLY 305

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R       A  ++E    +   + I K +  +M   V  +AM+ +GG GY  E  + +  
Sbjct: 306 R-------AVVKAESGLPSVGESSIAKCFANEMTREVTGKAMQLMGGYGYSREYPMEQKM 358

Query: 435 RESPANSILLGS 446
           R+S    I  GS
Sbjct: 359 RDSWGWGIAGGS 370


>gi|121998275|ref|YP_001003062.1| acyl-CoA dehydrogenase domain-containing protein [Halorhodospira
           halophila SL1]
 gi|121589680|gb|ABM62260.1| acyl-CoA dehydrogenase domain protein [Halorhodospira halophila
           SL1]
          Length = 593

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 62/365 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDA-----FIMLAQV----EG 251
           LTE + G+D+  +  +   + DG  Y L G K +++    +A      ++LA+     EG
Sbjct: 164 LTEPQAGSDLGQVKCR--AVPDGDAYRLYGQKTYITWGEHEAAENIIHLVLARTPDAPEG 221

Query: 252 RVGC--FLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
             G   FLVP  R+ EDGS    N +    L++K+G   + T  + + ++    G+L+G+
Sbjct: 222 HRGISLFLVPKYRVAEDGSLGVRNDVHCTALEHKLGIHGSPTCTISYGDSEGAVGYLVGE 281

Query: 302 LNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR---HVSGGI---- 348
                 P   +  +   ++ A   V    V +AE     A+ +AR R      GG     
Sbjct: 282 ------PCRGLNHMFTMMNEARHKVGVQSVGVAERAYQQALAFARDRVQGRRPGGKASVP 335

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI--MAPITKY 402
           ++  P ++R++  +     A  AL+   A   D     A + + ++A  R+    P+ K 
Sbjct: 336 ILQHPDVRRSLMTMRAQTEAMRALALLTAAEMDVAGHAADAAARQSAQRRVDLFTPVVKA 395

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD--VLNLLEK 460
                A  + +  ++  GG GYIEE    +  R+    +I  G+      D  +  +L+ 
Sbjct: 396 VASDQAVEITSVGIQVHGGMGYIEEVEAPQLLRDVRVAAIYEGTNGIQAQDFTLRKVLKD 455

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA-LASSAAALYR 519
           G         TLE  LG + + V  + RD      +   LA  L E +A L  S A L +
Sbjct: 456 GGE-------TLEAVLGEADETVEALRRDP-----DVAPLADGLAEGVATLRESTARLLQ 503

Query: 520 AGMND 524
            G  D
Sbjct: 504 DGAED 508


>gi|88703524|ref|ZP_01101240.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88702238|gb|EAQ99341.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 423

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 31/279 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217
           A  ++   T    + W PK+ S E              A G L +TE   G+D+  I + 
Sbjct: 97  APYISRHGTEEQKQQWLPKMVSGE--------------AFGALAMTEPGAGSDVQGIRTS 142

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  + L+G K F+++ + +D  ++ A  +   G      LL D +  G    R  
Sbjct: 143 AVRDGDE-WVLNGSKIFITNGIHADIVVVAAITDPGKGAKGTSLLLVDTTLPGFEKSRKI 201

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVS 331
            KIG  ++ T +L F +       LLG+ N   G V  M+ L    L  A  +V     +
Sbjct: 202 EKIGQHTSDTAQLFFQDVRLPANALLGEEN--RGFVIMMEELPRERLGIAAQAVGAAEGA 259

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   + Y + R   G  + +    +  +AD+   I  + AL  + A+ + +    +++AA
Sbjct: 260 LDITVDYVKERKAFGQSIGEFQNTRFKLADVKTQIGLSRALYEQCADEYAQGALTADKAA 319

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                  + K   C+M  + I + ++  GG GY  E  I
Sbjct: 320 -------MLKLASCEMQCSTIDDCLQLFGGYGYTVEYPI 351


>gi|324999463|ref|ZP_08120575.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 26/275 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIM 245
           AP  +  +   L +TE   G+D+  I +  ++  DG    + L G K F+SS MS  F++
Sbjct: 115 APFAQGQMLGALAMTEPGTGSDLQGIRTSARRDGDGPDADWILDGQKTFISSAMSADFVI 174

Query: 246 LA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +A + +   G      L+ +    G    R   K+G  +  T EL F       G L+G 
Sbjct: 175 VAVRTDPDAGSRGFSLLVVEEGMEGFTRGRRLEKVGLHAQDTGELFFDGVRVPAGNLIGT 234

Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                   +S  P E + ++          +  R    E   Y   R   G  + D    
Sbjct: 235 EGRGMHHLMSHLPQERLGLI------SGGYTAARAVYEETARYCFDRAAFGRSIGDFQNT 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           + A+A++  ++  A A   R   +F+  +    EAA         K++  ++   +    
Sbjct: 289 RFALAEMETELDVAEAYVDRCVRAFNADQLTPVEAAKG-------KWFITELQKRITDRC 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++  GG GY+ E  +AR Y +    +I  G+   M
Sbjct: 342 VQLHGGYGYMIEYPVARAYADCRIQTIYGGTTEIM 376


>gi|325284732|ref|YP_004264195.1| glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324316221|gb|ADY27335.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 452

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 42/289 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQK 220
           +AL  +    K W P +            M++       GLTE  GG+ ++  + +  ++
Sbjct: 169 IALGGSEEQKKRWLPDMLD----------MRRIGA---FGLTEPEGGSQVSEGMRTTCRR 215

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             DG + L+G K W  +S  SD  ++ A+ E    V  F+V    E G+P G   ++++ 
Sbjct: 216 DGDG-WVLNGEKKWIGNSTFSDFTVIWARDEETSEVRGFVV----EAGTP-GYSVEKIQG 269

Query: 278 KIGNR--SNATVELE---FSNTFGFLLGDLNVSTG--PVEDMKILIYLDSAIMSVSGMRV 330
           KI  R   N  + L+    ++ F      L    G   V D+  L     A   V     
Sbjct: 270 KIALRMVENGHITLQDCRVADEF-----RLQAVQGWDTVSDVLKLTRAGVAWQGVGCAMG 324

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA++R   G  + +  +++  +  +  D+ A   +  RL++  DE +     A
Sbjct: 325 AYELALAYAQQRKQFGKRIGEFQLVQNHLVLMLADVTAMLGMVTRLSHLADEGRMDDAHA 384

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           A A++         C+    V+A A E  GG+G + E  +A+H+ ++ A
Sbjct: 385 ALAKVHTAAR----CR---EVVARAREVFGGNGILLEHGVAKHFADTEA 426


>gi|301764555|ref|XP_002917688.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 621

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D+A+I S+     D   Y L+G K W  +  M++ F + A+ E         
Sbjct: 180 LTEPSSGSDVASIKSRATLSEDKKHYILNGSKVWITNGGMANIFTVFAKTEVVDSDSSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVRFENTRVPIENVLGEVGGGFK 294

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 295 VAMSTLNSGRF-----SMGSTVAGMLKKLIEMTAAYACTRKQFNKSLGEFGLIQEKFALM 349

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 350 AQKTYVMESMAYLTAGMLDQPGFPDCSIEAAMVKVFSSEGAWQC-------VSEALQVLG 402

Query: 421 GSGYIEERSIARHYRES 437
           G GY+ +    R  R+S
Sbjct: 403 GLGYMRDYPYERLLRDS 419


>gi|301166570|emb|CBW26146.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 605

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/296 (18%), Positives = 121/296 (40%), Gaps = 44/296 (14%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P + S E   +               LTE   G+D  +I ++  K  DG +
Sbjct: 148 TPEQKEKWLPSLASGEKLAS-------------FCLTEPGSGSDAYSIKTKAIKNDDGSF 194

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE--------GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++G K W  ++  ++ + +  + +         ++ CF++ + +E     G+ +   +N
Sbjct: 195 TITGQKLWITNAGTAEFYTVFCKTDHEKDGKMVEKISCFIIEKGME-----GVSFGEKEN 249

Query: 278 KIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G R++ T       V++   N  G L     ++   +   ++ +        V GM+ 
Sbjct: 250 KMGIRASETRAVYFDKVKVPAENVLGELGKGFKIAMNVLNSGRLSL----GAGCVGGMKT 305

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L  A  +A+ R   G  + D  ++++ +A +A    A  ++ +    +  +  +     
Sbjct: 306 ILKMATEHAKGRKQFGAPISDFGLIQQKLAFMAARCYATESIVYMTTGNMIKGMND---- 361

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +   I K +  +    V+   ++   G+GY++E    R  R+S  N I  G+
Sbjct: 362 --YFLETAICKVYGSESLWTVVDTGLQIAAGNGYMKEYPYERIMRDSRINLIFEGT 415


>gi|262197815|ref|YP_003269024.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081162|gb|ACY17131.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 599

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 40/315 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+ +A + +      +G Y + G K F+S    D       ++LA++EG   
Sbjct: 166 MALTEPQAGSSLADVQTVATPTDEGHYLIRGSKIFISGGDHDLADNIVHLLLARIEGAPA 225

Query: 253 ----VGCFLVP--RLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302
               +  F VP  RL  D    N +    + +KIG R+  ++ + +    +  G+L+G+ 
Sbjct: 226 GTRGLSLFAVPKRRLAGDALVENDVHSAGMVHKIGWRALPSMVMSYGEEGDCHGWLVGEA 285

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LID 351
           +     +  M     L   +  V+   V+  E++ YAR R     +           +I+
Sbjct: 286 HRGLAHMFQMMNEARLSVGMSGVATASVAYHESLMYARTRLQGRPLGRKNADSEPVAIIE 345

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405
              ++R +      I    AL  R +   D A   ++     R      ++ PI K +  
Sbjct: 346 HADVRRMLLRQKAIIEGGLALLVRASKYTDLAAHAADPGQRERAQILLDLLTPIAKSFPA 405

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT 462
           +        A++  GG GY  E  +    RE   NSI  G+     LD+L    +  KG 
Sbjct: 406 ERGFEANTLALQIFGGYGYSSEYPVEAWLREQKLNSIHEGTTGIQGLDLLGRRIVAGKGA 465

Query: 463 ---NLFEQLFSTLEQ 474
               L E++ +T+E+
Sbjct: 466 AVRTLAEEVGATVER 480


>gi|221632151|ref|YP_002521372.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221155752|gb|ACM04879.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 428

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 39/284 (13%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
             REY P     + +  +     ++E + G+D   I+++ +   DG + L+G K W   +
Sbjct: 106 LKREYLPR----LARGEIIGVFAMSEPQVGSDGQGISTRAE-WRDGYWVLNGVKYWITWA 160

Query: 238 PMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              D F + A  +      G +  FLVP+    G+P G+   R +  +GN       L F
Sbjct: 161 ERGDVFTVAAATDPGKGAHGGISVFLVPK----GTP-GMRVARRQKMMGNAGIDESVLVF 215

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRR 342
            +       LLG+L          ++L+  LD   +    + +  AE     A+ Y +RR
Sbjct: 216 EDCKVPAENLLGELGWG------FRLLMRTLDEGRVKCCSLAIGYAERAWELAMAYVKRR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L D   ++  +A+ A  I  +    +  A   D  +  ++EAA A++       
Sbjct: 270 QAFGQRLADFQGIQWQLAEAATTIWLSRLAMYEAARKIDRGEFAAKEAAMAKL------- 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +    V+  A++  G  GY  +  + R YR   +  I+ G+
Sbjct: 323 YSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSLRIVEGT 366


>gi|319795987|ref|YP_004157627.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598450|gb|ADU39516.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 15/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K  +G Y L+G K W  +   +D  ++ A+ E  +G   +
Sbjct: 128 LAMSEPNAGSDVVRMKLKAEK-KNGYYVLNGGKMWITNGGDADTLVIYAKTEPEMGARGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + + +  G       +K+G R + T  L F N     + + NV  G     K+L+  
Sbjct: 187 TAFIVEKNYKGFSAGTKLDKLGMRGSNTYPLFFDNC---EVPEENVLGGEGLGAKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG     M   +   + +   R   G  + +  +M+  +AD+     A  A 
Sbjct: 244 LDYERAVLSGGPLGIMAACMDAVLPFIHERKQFGQSIGEFQLMQGKLADMYSTWQATRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D    R++ A   R  A     +  + A  +  EA++ +GG GY ++  + R
Sbjct: 304 VYAVGKACD----RNDHARTFRKDAAGAILYSAEKATWMAGEAIQALGGVGYTKDFPVER 359

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 360 LWRDAKLYEIGAGT 373


>gi|187960098|ref|NP_001120800.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           b precursor [Homo sapiens]
 gi|119626805|gb|EAX06400.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_b [Homo sapiens]
          Length = 425

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 25/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 164 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 222

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 223 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 282 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 337

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 338 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 390

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           + +  R++    I  G+     L V
Sbjct: 391 VEKLMRDAKIYQIYEGTSQIQRLIV 415


>gi|312602430|ref|YP_004022275.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169744|emb|CBW76756.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 381

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 20/254 (7%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D+ ++ +Q  +  DG Y L+G K +++ +P++D  ++ A ++  +G   V   
Sbjct: 128 TEDEAGSDVFSMRTQAIRDGDG-YVLNGSKTYITNAPIADLCVVYATIDPTLGPLGVTAF 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           L + +  GL       K+G R+     +   +       +LG         E    + Y 
Sbjct: 187 LVETTNPGLDLSPPLEKMGLRTAQMGRITLKDCRVPADAILGREGRGVKVFE--SAMEYE 244

Query: 319 DSAIMSVS--GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I++ +   MR  L   I +AR R   G  +     +   +AD+ +++ AA  L +R+
Sbjct: 245 RGCILATTLGAMRRHLEACITHARTRRQFGQPIGKHQAVSHRLADMKVNLDAACELVYRV 304

Query: 377 ANSFDEAKSRSEEAAYARIMA--PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               D  K  + EAA A++      TK+           +A+   G  GY+ +    R  
Sbjct: 305 GRLKDAGKDATLEAACAKLFVSEAYTKFSI---------DALRIYGAQGYLAQTPTERGL 355

Query: 435 RESPANSILLGSGN 448
           R++ A+ +  G+ +
Sbjct: 356 RDAIASLLYSGTSD 369


>gi|215431661|ref|ZP_03429580.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
 gi|289754827|ref|ZP_06514205.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
 gi|289695414|gb|EFD62843.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
          Length = 386

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G    
Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----K 313
             L+ +    G    R  +KIG  +  T EL F+        D+ V   P E++      
Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFT--------DVAV---PAENLLGQEGM 237

Query: 314 ILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             IYL   +         M+ +GM   L + + YA+ R   G  +      +  +A++A 
Sbjct: 238 GFIYLMQNLPQERIAIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +      +           K  +E+AA A       K++  +    +    ++  GG GY
Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y +S   +I  G+   M
Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376


>gi|154275546|ref|XP_001538624.1| hypothetical protein HCAG_06229 [Ajellomyces capsulatus NAm1]
 gi|150415064|gb|EDN10426.1| hypothetical protein HCAG_06229 [Ajellomyces capsulatus NAm1]
          Length = 468

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 192 ICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMN 251

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV---- 309
            +  LL + S  G+  +++  + G  ++ T  + F +       L+G  N     +    
Sbjct: 252 GISVLLIERSAGGVGTRKMDCQ-GMATSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNF 310

Query: 310 --EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             E M I+I        V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 311 NHERMGIII------QCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHMARHIE 364

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +S  +  A  R+   I         T  +C + A  +       
Sbjct: 365 ASHNW---LENLVFQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 421

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      I R YR+  A +I  GS   M+
Sbjct: 422 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 450


>gi|118469597|ref|YP_888075.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170884|gb|ABK71780.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 411

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 27/246 (10%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR----LLEDGSPNGLCYQRLKNKIG 280
           Y L+G K F+++ P +D  ++ A+++   G     R     + D    G    +   K+G
Sbjct: 170 YILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTFVLDKGMEGFVQSKPFRKMG 229

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE------ 334
             S+ T EL F+N     LG   +  G  ED       DSA  S S  R+ +A       
Sbjct: 230 IHSSRTGELFFNNV---RLGRDRL-LGETEDHGAGDGRDSARSSFSAERIGVAAMALGVI 285

Query: 335 ------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                 ++ YA+ R + G  +    +++  +A++ +       + FR+  S  E K  S 
Sbjct: 286 EECLRLSVDYAKSRKLWGQEIGQFQLIQLKLANMEVARMNVRNMLFRVIESSQEGKPISL 345

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A       K++C + A  V  +A++  GG+GY+ E  + +  R++ +  I  GS  
Sbjct: 346 AEASA------IKWYCSQAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMIYAGSNE 399

Query: 449 AMVLDV 454
             +  V
Sbjct: 400 VQITHV 405


>gi|221045280|dbj|BAH14317.1| unnamed protein product [Homo sapiens]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 124 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 183 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 242 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 298 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 350

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 351 VEKLMRDAKIYQIYEGT 367


>gi|170690198|ref|ZP_02881365.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144633|gb|EDT12794.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 377

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++   + DG + LSG K F+++   +D  I+ A  +   G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILSGSKQFVTNGARADIAIVFAVTDPDRGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G    + ++K+G R++ T  +   +     + + N+   P E ++I 
Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   V +A A   A R + S     G  L D   +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQAVGIARAAFDAARAYASERMQFGKALKDHQTIANMLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      +    EA+ A++ A        +MA  + + A++  GG GY+E+ +
Sbjct: 296 RLLVHHAARLRSAGEPCLSEASQAKLFA-------SEMAEQICSNAIQIHGGYGYLEDYA 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|241663084|ref|YP_002981444.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240865111|gb|ACS62772.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 622

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/318 (20%), Positives = 128/318 (40%), Gaps = 67/318 (21%)

Query: 202 LTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           L+E + G+ ++ I ++ +  ++      Y L+G+K ++S+   +       ++LA++ G 
Sbjct: 164 LSEPQAGSSLSDIVTRAEYEAESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L +     G  N +    L +K+G R      L F      
Sbjct: 224 DGKLIPGVKGISLFIVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                     +   G+L+G+    L      + + +I + + + ++  +G       A+ 
Sbjct: 284 RPKGADGQPRAGAIGYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGY----LHAVD 339

Query: 338 YARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YAR R     +             ++D   ++R +      +  A  L+   A   DE +
Sbjct: 340 YARNRPQGRPVGPSGKDAAAAQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEER 399

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ A  A+      I+ PI K W  +      + A++  GG GY  E ++ + YR++ 
Sbjct: 400 GETDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNR 459

Query: 439 ANSILLGSGNAMVLDVLN 456
            N I  G+     LD+L 
Sbjct: 460 LNPIHEGTHGIQGLDLLG 477


>gi|17534353|ref|NP_496469.1| hypothetical protein F54D5.7 [Caenorhabditis elegans]
 gi|2492633|sp|Q20772|GCDH_CAEEL RecName: Full=Probable glutaryl-CoA dehydrogenase, mitochondrial;
           Short=GCD; Flags: Precursor
 gi|3877512|emb|CAA91333.1| C. elegans protein F54D5.7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 409

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 45/254 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG 254
            GLTE   G++   + ++     +   Y L+G K W  +SP+SD  ++ A+      ++ 
Sbjct: 149 FGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSARHNNKIK 208

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F++ R ++     GL   +++ K+  R++ T ++   +              PV +  +
Sbjct: 209 GFILERGMK-----GLTTPKIEGKLSLRASITGQIAMDDV-------------PVPEENL 250

Query: 315 LIY---LDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAI 359
           L     L      ++  R+ +A        E  H AR+    R   G  L    +M+  +
Sbjct: 251 LPNAEGLQGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKM 310

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I+       R++   DE K +SE+ +       I K   C  A  V  +A + +
Sbjct: 311 ADMLTEISLGLQGCLRVSRLKDEGKVQSEQIS-------IIKRNSCGKALEVARKARDML 363

Query: 420 GGSGYIEERSIARH 433
           GG+G ++E  I RH
Sbjct: 364 GGNGIVDEYHIMRH 377


>gi|300775371|ref|ZP_07085233.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300506111|gb|EFK37247.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 452

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 41/266 (15%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           MQK       GLTE   G+  A  +T   +K  +G + L+G K W  ++  +D  I+ A+
Sbjct: 185 MQKFEKIGAFGLTEPEVGSGAAGGLTVTCRKTPEG-WVLNGQKKWIGNATFADLVIIWAR 243

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATV-----------ELEFSN 293
               G V  F+V    E  +P G   +++K K+  R   N  +            L+ +N
Sbjct: 244 DLDSGEVKGFIV----EKDNP-GYSVEKIKGKMALRIVQNGLITLKDCLITEENRLQNAN 298

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           +F          TG V  M        A M+    R +   A+ Y R+R   G  +    
Sbjct: 299 SFK--------DTGKVLRM---TRAGVAWMATGCARGAYESALDYTRKREQFGRPIASFQ 347

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  + ++  ++ A   + FRL+   DE   + E A+ A++       +C      +++
Sbjct: 348 MIQGHLVEMLSNLTAMQTMVFRLSEMQDEGILKDEHASLAKV-------FCTLRTRDIVS 400

Query: 414 EAMECIGGSGYIEERSIARHYRESPA 439
            A E +GG+G + E  +AR   ++ A
Sbjct: 401 RAREVMGGNGILLEYDVARFVADAEA 426


>gi|2407655|gb|AAC48316.1| 2-methyl branched-chain enoyl CoA reductase isoform I [Ascaris
           suum]
          Length = 419

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 113/260 (43%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS--PMSDAFIML-------AQVEGR 252
           +TE   G+D+A + ++ +K  D  Y ++G K ++++  P S  F++        A +   
Sbjct: 150 VTEPWAGSDVAGVKTKCEKKGDE-YVINGSKMWITNAGPASWFFVLCRSDPDPKAPISKA 208

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R++ T  + F +     +   N+   P E  
Sbjct: 209 FTAFVV-----DGDTPGITRGKKEMNMGQRASDTRAVTFEDV---RVPAENMVGAPGEGF 260

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + +   D     V+ +   L+     EA  YA  R   G  +     +   +AD+A+++
Sbjct: 261 IVAMKTFDKTRAEVAAIATGLSSRCLDEAAKYALERKTFGVPIAQHQAVAFMLADMAINL 320

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  +++R A  + + + R          + I K +C   A    + A++ +GG+GY +
Sbjct: 321 ELSRLITYRSAWEWMQGRPRG-------YFSSIAKCFCADTANIAASNAVQILGGNGYNK 373

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 374 EYPVEKLMRDAKIMQIYEGT 393


>gi|312215134|emb|CBX95087.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 553

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 277 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGVWSEYFTTAVRTGGEGMN 336

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + S  G+  +++  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 337 GISVLLIERSAGGVSTRKMDCQ-GVWSSGTTYITFEDVKVPVENLIGKEN------QGFK 389

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  +   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 390 VIMTNFNHERIGIIIQCIRFSRVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIE 449

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A+      L N   + +  +E  A  ++   I         T  +C + A  +       
Sbjct: 450 ASYNW---LENLVYQCQKMNEMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYS 506

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 507 RGGQG----AKVERLYRDVRAYAIPGGSEEIML 535


>gi|145225136|ref|YP_001135814.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217622|gb|ABP47026.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 393

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 30/295 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A +TTP   K W P   S               +   +G+TE   G+D++ I +     
Sbjct: 101 LADLTTPEQKKRWLPGFVS-------------GRLIAAIGMTEPGAGSDLSGIRTSAVDK 147

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + ++G K F+++   +D  I   +        L   ++E G  +G    R  +K+G
Sbjct: 148 GDH-FLVNGAKTFITNGQNADLVITAVRTSPDRHRGLTLLVMERGL-DGFERGRNLDKLG 205

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEA 335
                T EL F++       +LG+  V  G    M+ L    +  A+ S+  +R +L   
Sbjct: 206 LHCQDTSELTFTDVKVPKENVLGE--VGDGFAHMMRNLAQERMQIAVGSLGRIRAALDWT 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y R R   G  +      + ++AD+A  +A   A         +E +  + +AA A++
Sbjct: 264 VTYVRERTAFGKPIGALQNTRFSLADVATQLAVTQAFIDNCVIELNEGRLTAADAAMAKL 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            A  T++ C       +    +  GG GY+ E  IAR   ++    +  G+   M
Sbjct: 324 WASETEFRC-------LDACQQLFGGYGYMREYPIARAAIDARITRVYGGTSEIM 371


>gi|46138551|ref|XP_390966.1| hypothetical protein FG10790.1 [Gibberella zeae PH-1]
          Length = 562

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 39/284 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 270 ICLAITEPDAGSDVANLTCEAKLSDDGKHYIVNGEKKWITNGIWSDYFTVAVRTGEAGMN 329

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN---------- 303
            V  LL + S  G+  +R+  + G  S+ T  + F +       LLG  N          
Sbjct: 330 GVSLLLIERS-EGVSTRRMPCQ-GVLSSGTTYITFEDVKVPVENLLGKENQGFKGKFCYI 387

Query: 304 -VSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            +S      + +++       +   I S+   RV   E++ Y  +R   G  LID PV++
Sbjct: 388 RMSQDQANMLSVIMTNFNHERMGIIIQSLRFSRVCYEESVKYGSKRRTFGKKLIDHPVIR 447

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKM 407
             +A +A  I A+      L N   + +   E  A  R+  PI         T  +C + 
Sbjct: 448 MKLAHMARQIEASYNW---LENLIYQCERMGETEAMLRLGGPIAGLKAQSTLTFEFCARE 504

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A  +        GG G      + R YR+  A +I  GS   M+
Sbjct: 505 ASQIFGGLSYSRGGQG----AKVERLYRDVRAYAIPGGSEEIML 544


>gi|294629725|ref|ZP_06708285.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292833058|gb|EFF91407.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 21/276 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           S E       P+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ 
Sbjct: 109 SEELKKKYMTPLAKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGDH-YVLNGVKRWITNAG 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---F 295
           +S+ + ++A  +       +   + + S  G+ +   + K+G + + T E+   N     
Sbjct: 168 VSEYYTVMAVTDPAKRSRGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNVRIPA 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             ++G+    TG    MK    LD   ++++   + +A+     A  Y + R   G  + 
Sbjct: 228 DRMIGEEG--TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIA 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+A+ ++AA AL+++ A + +   +   +  Y    A   K +   +A  
Sbjct: 283 DFQGIQFMLADMAMKVSAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDIAME 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 337 VTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|283833363|ref|ZP_06353104.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|291071008|gb|EFE09117.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 383

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ M+    A  L LTE   G+D  + T+   + +  +Y L+G K F++      +++
Sbjct: 108 TAESTMETGDPAYALALTEPGAGSDNNSATTSYTRKNGKVY-LNGQKTFITGAKEYPYML 166

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D    G+    L +KIG    +T       VE+E S+  G
Sbjct: 167 VLARDPEPKDPKKAFTLWWVDSKKPGIKVNPL-HKIGWHMLSTCEVYLDDVEVEESDMVG 225

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 226 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 281 QEKLALMAIKIENMRNMVLKVAWQADQEQS-------LRTSAALAKLYCARTAMEVIDDA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 334 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|238024524|ref|YP_002908756.1| acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
 gi|237879189|gb|ACR31521.1| Acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
          Length = 392

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 14/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +     Y L+G K W  + P  D  ++ A+ +   G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-HYVLNGTKMWITNGPDCDTLVVYAKTDPEAGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV---EVPEENVLGEVGSGVKVLMSG 244

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     ++G     M   L   + Y   R   G  + +  +++  +AD+  +  A  A 
Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTNFQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D A S   +A   +  A +  Y   + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRHLDAAGSHVRQAR--KDCAGVILY-TAERATWMAGEAIQILGGNGYINEYPVGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 LWRDAKLYEIGAGT 375


>gi|225686253|ref|YP_002734225.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256262611|ref|ZP_05465143.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642358|gb|ACO02271.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263092398|gb|EEZ16651.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410609|gb|ADZ67673.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326553901|gb|ADZ88540.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 380

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 30/242 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGD-HYVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EE 427
            +
Sbjct: 343 AD 344


>gi|17505929|ref|NP_491942.1| Acyl CoA DeHydrogenase family member (acdh-5) [Caenorhabditis
           elegans]
 gi|1943792|gb|AAB52448.1| Hypothetical protein C37A2.3 [Caenorhabditis elegans]
          Length = 442

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 29/265 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRV 253
           L ++E   G+D++A+ +  ++    +       W  +   +D   +L      + V    
Sbjct: 179 LAVSEPHAGSDVSAVHTHARRQGSDLIINGSKMWITNGGQADWACVLVNTSNTSNVHKNK 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
               VP         G+      +K+G RS+ TV+L F +      +++G+     G   
Sbjct: 239 SLVCVPL-----DAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFG--- 290

Query: 311 DMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  + D  +++V+     ++  + E I YAR R + G  L+DQ  ++  +A++  ++
Sbjct: 291 -YQMKQFNDERLVTVAVGLLPLQKCIDETIEYARDRLLFGKTLLDQQYIQFQLAELEAEL 349

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  AL +R       A+SR ++ +    MA   K    ++A A+  + ++  GG+GY+ 
Sbjct: 350 EATRALLYRTV----LARSRGDDVSMLTAMA---KLKIGRLARAITDQCLQVWGGAGYLN 402

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  I+R +R+    SI  G    M+
Sbjct: 403 ENGISRAFRDFRLFSIGAGCDEVMM 427


>gi|24646207|ref|NP_650163.2| CG4860 [Drosophila melanogaster]
 gi|7299576|gb|AAF54761.1| CG4860 [Drosophila melanogaster]
 gi|21064323|gb|AAM29391.1| RE05302p [Drosophila melanogaster]
 gi|220958136|gb|ACL91611.1| CG4860-PA [synthetic construct]
          Length = 415

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  A ++   K+    Y ++G K W  +S  +   I+ A V+       +  
Sbjct: 156 LSEPGNGSDAGAASTTA-KLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMKHKGITA 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310
           FL P+ +      GL   + ++K+G R+ +T +L        +L D++V    V     +
Sbjct: 215 FLTPKDVP-----GLSIAKKESKMGMRATSTCQL--------VLEDVHVPRSRVLGAAGD 261

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +  LD   + ++     +A+A     + Y+++R   G  L    ++++ +AD+A 
Sbjct: 262 GFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMAT 321

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  +  L++R A   D     ++EAA A++ A  +  +C         + ++ +GG GY
Sbjct: 322 RVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAH-------QCIQILGGMGY 374

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +     +YR +    I  G+     + + N
Sbjct: 375 TTDLPAELYYRNARVTEIYEGTSEIQRIVIAN 406


>gi|99082636|ref|YP_614790.1| butyryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99038916|gb|ABF65528.1| Butyryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 399

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  +T+  +K  D  + L+G K F+S + ++D A + +A  E       
Sbjct: 135 LAMTEPGAGSDLRGMTASARKEGDD-WVLNGTKHFISHADIADFAIVFMATGEEDTPRGK 193

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG+++   
Sbjct: 194 KKKITAFFVDK----GTP-GFAVRDGYRNVSHRGYTNQVLEFDDCRLPSSAILGEVDQGF 248

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIAD 361
                      L  A   +     +L  A+ YA +R   G     QP+ K       +AD
Sbjct: 249 EVANTWLGATRLQVAATCLGRADRALQHAVEYAAQRKQFG-----QPISKFQGVSFKLAD 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+++ AA  L++     FD+      + + A++ A        +M   V  EA++  GG
Sbjct: 304 MAMELKAANLLTWEAGWKFDQGSVTEADMSMAKLKA-------TEMLAMVADEAIQIHGG 356

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G ++E  + R +R++    I  G+
Sbjct: 357 MGLMDELPLERIWRDARVERIWEGT 381


>gi|333022707|ref|ZP_08450771.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332742559|gb|EGJ73000.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 393

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           ++E+  G+D+ A+  +  +  DG + L G K W  S+ ++   ++ A  +   G   +  
Sbjct: 137 ISEREAGSDVGAMRCRATEDGDG-WVLDGVKTWITSAGVARYLVVFAVTDPGAGSRAISA 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
            +      G+ Y   + K+G + + T E+ F  T    G LLG+          M++ L 
Sbjct: 196 FVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLGERG------RGMRVALG 249

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +S+    + +A+     A+ Y + R   G  + D   ++  +AD+A+ + +A  
Sbjct: 250 TLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLADMAVRVESARQ 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A     + SR+ +  Y        K      A AV  +A++ +GG GY  +    
Sbjct: 310 LVYAAAAR---SASRAPDLTY---FGAAAKCLASDTAMAVTTDAVQLLGGYGYTRDFPAE 363

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 364 RMMRDAKITQIYEGT 378


>gi|171679663|ref|XP_001904778.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939457|emb|CAP64685.1| unnamed protein product [Podospora anserina S mat+]
          Length = 544

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 29/271 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 268 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWCDYFTVAVRTGGPGMN 327

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN----VSTGPV 309
            V  LL +    G+  +R+  + G  S+ T  + F +       L+G  N    V     
Sbjct: 328 GVSLLLVERDFGGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKENQGFRVIMTNF 386

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I +     S    RV   E++ YA +R   G  LI+ PV++  +A +A  I A+
Sbjct: 387 NHERIGIIIQCLRFS----RVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEAS 442

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMECIG 420
                 L N   + +   +  A  R+  PI         T  +C + A  +        G
Sbjct: 443 YNW---LENVIYQCEKMGDTEAMLRLGGPIAGLKAQATVTFEFCAREASQIFGGLSYSRG 499

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G      + R YR+  A +I  GS   M+
Sbjct: 500 GQG----GKVERLYRDVRAYAIPGGSEEIML 526


>gi|328958476|ref|YP_004375862.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674800|gb|AEB30846.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 406

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 33/253 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCF 256
             LTE   G+DIA   +   +     + ++G K W   +  +D   + A  + +G+V  F
Sbjct: 148 FALTEPEHGSDIAGGLATTARKEGDTWIINGEKRWIGGAGSADEIAVFARDEADGKVKAF 207

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------STGPV 309
           +VP     G   G+  Q+++ KI         L  +      L D+ V       +    
Sbjct: 208 MVP-----GKAEGVHVQKIEGKIS--------LRMTQNGHITLTDVKVGEDRRLQNVNSF 254

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +D+  ++ +  A +S   +G+     EA + Y ++R   G  L    +++  ++ +  ++
Sbjct: 255 KDVAGILRITRADISHLATGLTAGAFEAALRYVKQREQFGKNLGSFQLVQEKLSIMQANV 314

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  + S RLA          EE  Y  + + + K          +A A E +GG+G   
Sbjct: 315 TANLSFSVRLAQM-------QEEGNYREVNSSMAKMHNALRMRETVALAREVVGGNGITL 367

Query: 427 ERSIARHYRESPA 439
           E  +AR + ++ A
Sbjct: 368 ETDVARFFADAEA 380


>gi|309789981|ref|ZP_07684557.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
 gi|308228001|gb|EFO81653.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
          Length = 544

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 27/262 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGI---YCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           +  G TE + G+D+  +T++ + +  DG    Y +SG K W  +  ++  + +LA   G 
Sbjct: 124 VAYGATEPQAGSDLGTLTTKAEPVLDDGKVVGYKISGRKQWISNGGVAVIYTILANTPGG 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
              F+V R        G    + ++K G R++ T  L   + +     L+G +    G  
Sbjct: 184 PSWFVVDR-----DTPGFVKGKHEDKHGIRASNTAALFLDDVYVDADRLVGGVE-GQGLA 237

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-IDQPVMKRAIADIALDI 366
           +   +  Y  L  A   + G   +L  AI Y++ R   GG+L   Q    R +   A+ +
Sbjct: 238 QAQAVFGYTRLMVAAFGLGGGWAALERAIRYSQTRIQGGGLLSTKQAYTHRLLVPNAIRL 297

Query: 367 AAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            AA A     A   D  E   ++E A        I KY   +       +A++ +GG GY
Sbjct: 298 EAARAYIEWTAARIDAGEPDLQTEGA--------IAKYMATEGGNKAAEDAIQALGGYGY 349

Query: 425 IEERSIARHYRESPANSILLGS 446
            +E  + +  R+     I  G+
Sbjct: 350 TKEYMVEKIKRDVRITCIYEGT 371


>gi|260868185|ref|YP_003234587.1| putative acyl-CoA dehydrogenase [Escherichia coli O111:H- str.
           11128]
 gi|257764541|dbj|BAI36036.1| predicted acyl-CoA dehydrogenase [Escherichia coli O111:H- str.
           11128]
 gi|323181012|gb|EFZ66550.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1180]
          Length = 383

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S    AA A++       +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKV-------YCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|221632074|ref|YP_002521295.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221155633|gb|ACM04760.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 403

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +        LTE   G+D   I ++  +  D  Y L+G K W   +  +D F++ A 
Sbjct: 113 PQARGEKLATFALTEPGAGSDAGHIQTRAVRDGDS-YILNGEKMWISLANTADHFLVFAT 171

Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++  +G   L   ++E G P GL    +  K+G R+  T  +   N     +   N+   
Sbjct: 172 LDPALGHRGLCAFMVERGMP-GLTTGSIHGKLGVRAGDTGWISLQNV---RVPAENMIGE 227

Query: 308 PVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           P E  KI +  +D    +V+      +R  L  ++ Y   R   G  +    ++++ IA 
Sbjct: 228 PGEGFKIAMSAIDQGRFTVAAGACGLIRACLEASVKYCHERQAFGQEIGRFQLVQQMIAK 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +      +  L FR A   +     + E + A       K+  C  A     +A++  G 
Sbjct: 288 MVRGYETSRLLVFRAAELKNRGIRNTRETSLA-------KWHACDCAFEAANDAVQIHGA 340

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY  E  + R++R S    I  G+
Sbjct: 341 YGYSSEYPVERYFRNSRGAVIYEGT 365


>gi|238491502|ref|XP_002376988.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|317146005|ref|XP_001821225.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
 gi|220697401|gb|EED53742.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 543

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 33/273 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 267 ICLAITEPDAGSDVANLTCEAKLTPDGKHYIVNGEKKWITNGVYADYFTTAVRTGGPGMN 326

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 327 GLSVLLIEREHGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 379

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I      RV   EA+ YA +R   G  LID PV++  +A +A  I 
Sbjct: 380 VIMTNFNHERIGIVIQCCRFARVCYEEAVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIE 439

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418
           A       L N   + +S  E  A  ++   I         T  +C + A  +       
Sbjct: 440 ATYNW---LENIIYQCQSMDETEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYS 496

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG G      + R YR+  A +I  GS   M+
Sbjct: 497 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 525


>gi|318058207|ref|ZP_07976930.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318078107|ref|ZP_07985439.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 393

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           ++E+  G+D+ A+  +  +  DG + L G K W  S+ ++   ++ A  +   G   +  
Sbjct: 137 ISEREAGSDVGAMRCRATEDGDG-WVLDGVKTWITSAGVARYLVVFAVTDPGAGSRAISA 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
            +      G+ Y   + K+G + + T E+ F  T    G LLG+          M++ L 
Sbjct: 196 FVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLGERG------RGMRVALG 249

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +S+    + +A+     A+ Y + R   G  + D   ++  +AD+A+ + +A  
Sbjct: 250 TLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLADMAVRVESARQ 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A     + SR+ +  Y        K      A AV  +A++ +GG GY  +    
Sbjct: 310 LVYAAAAR---SASRAPDLTY---FGAAAKCLASDTAMAVTTDAVQLLGGYGYTRDFPAE 363

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 364 RMMRDAKITQIYEGT 378


>gi|297204581|ref|ZP_06921978.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710648|gb|EDY54682.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 383

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 25/260 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + +GL+E   G+D AA+ +  +   D         W     + D  I      G      
Sbjct: 121 LAVGLSEPDSGSDAAALRTTAEDHGDNFLVRGQKAWCTGGGLPDTTIATYVRTG------ 174

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPV-EDM 312
            PR  + G  + L      + +  R   T+      T      D  V      GP  E  
Sbjct: 175 -PREPKHGGISLLLVDPATDGVEVRRTPTLARHILGTNEVFFNDALVPKENLVGPRDEGW 233

Query: 313 KIL---IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K++   I L+  I+S   +   + +L E + YAR RH  G  + +   +  A+AD+  +I
Sbjct: 234 KVMLSNIELEKVIISGGYLGAAQATLDEMLDYARNRHAFGRPIGNFQALAHAMADLQTEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A    + K  + E + A++    T     ++        M+   G G+  
Sbjct: 294 DSARLLAYRAAWLLAQGKPCTREGSMAKLKGSETYVAAARL-------GMQVCAGHGFST 346

Query: 427 ERSIARHYRESPANSILLGS 446
           E  ++  YRES   +I  G+
Sbjct: 347 ESVMSFRYRESIVATISGGT 366


>gi|299533349|ref|ZP_07046732.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298718665|gb|EFI59639.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 619

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 70/325 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSS---PMSDAFI-- 244
           + L+E + G+ ++ I ++ +   DGI          Y L G+K ++SS    M++  +  
Sbjct: 157 MALSEPQAGSSLSDIATRAE--PDGIEHESDALGPRYRLKGNKMWISSGDHEMTENIVHL 214

Query: 245 MLAQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE 288
           +LA++ G  G           F+VP+ L D      G  N +    L +K+G R      
Sbjct: 215 VLAKIPGADGKTIAGVKGISLFIVPKKLVDAEGRLTGERNDVALAGLNHKLGWRGTTNTL 274

Query: 289 LEFSN-------------------TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSV 325
           L F                       G+L+G     L      + + +I I + ++++ +
Sbjct: 275 LNFGEGKYPVRGQHGGGLDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAASMLGM 334

Query: 326 SGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRL 376
           +G   SL  A    + R +  G          +I+   +KR +         A AL+   
Sbjct: 335 AGYHASLEYAQSRPQGRPIGEGGKDASRPQSRIIEHADVKRMLLAQKAYCEGALALNLLC 394

Query: 377 ANSFDEAKS-RSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           A   DE  +  +++AA AR    ++ P+ K W  +      + A++  GG GY  + ++ 
Sbjct: 395 ARLVDEQYTGEAQQAAEARLLLEVLTPVAKSWPSEFCLEANSLAIQIHGGYGYTRDFAVE 454

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           +++R++  N I  G+     +D+L 
Sbjct: 455 QYWRDNRLNMIHEGTHGIQAMDLLG 479


>gi|239835144|ref|ZP_04683471.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821283|gb|EEQ92853.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 375

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 30/267 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ ++  D  Y + G K F++S  + + +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARRDGDH-YVIDGSKQFITSGKNGSVVIVFAVTDPSAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVVSVEHKLGQHSSDTCALAFTNMRIPVENRLGEEGQGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  SV   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQSVGLARAAFEAARAYARERVTFGKPIIEHQAVAFRLADMATK 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IEAARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            +  + R YR+     I  G+ +   L
Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369


>gi|218463525|ref|ZP_03503616.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 314

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D   + ++ +KI+ G Y L G K W  +SP++D F++ A+ E     +  
Sbjct: 56  FGLTEPDAGSDPGGMKTRAEKITGG-YRLRGSKMWISNSPIADVFVVWAKSEAHNNEIRG 114

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+       T   +L  ++   GP    
Sbjct: 115 FVLEKGMK-----GLSAPKIGGKLSLRASITGEIVMDGVEVTEDAILPGVSGLKGP---- 165

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +I 
Sbjct: 166 --FGCLNRARYGISWGVMGAAEDCWFRARQYGLDRKQFGKPLAGMQLYQKKLADMMTEIT 223

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE K   E       M  + K   C  A  +   A +  GG+G   E
Sbjct: 224 LGLQGSLRVGRLMDEHKMAPE-------MVSLVKRNNCGKALEIARHARDMHGGNGIQIE 276

Query: 428 RSIARH 433
             + RH
Sbjct: 277 YHVMRH 282


>gi|156541938|ref|XP_001601226.1| PREDICTED: similar to acyl-coa dehydrogenase [Nasonia vitripennis]
          Length = 924

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 34/272 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------- 249
           LTE   G+D  A+ S+  K  DG  Y L+G K W  +  +++   + AQV          
Sbjct: 487 LTEPSCGSDAGAVRSKAVKSPDGSHYILNGSKIWISNGGLAEIMTVFAQVPMKDPITGET 546

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           + +V  F+V R    G  NG      +NK+G + + T E+ F +     +   NV  G  
Sbjct: 547 KDKVTAFIVERAF-GGVTNG----PPENKMGIKCSNTTEVYFEDV---KIPAENVLGGEG 598

Query: 310 EDMKILIYLDS-----AIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K+ + + +        ++SG M+    +AI +A +R      +     ++  +A ++
Sbjct: 599 QGFKVAMQILNNGRFGMAAALSGTMQYCTKKAIEHAVQRIQFSRTIDSYGTIQEKLARMS 658

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +      ++++ ++ + D+       EAA +++ A  + +W C        EA++ +GG 
Sbjct: 659 MLQYITQSMAYMVSGNMDKGSQDYHLEAAISKVFASESAWWVCD-------EAIQVLGGM 711

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G+++   + R  R+     I  G+ + + L V
Sbjct: 712 GFMKSTGLERVLRDLRIFRIFEGTNDILRLFV 743


>gi|108798271|ref|YP_638468.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867367|ref|YP_937319.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126433938|ref|YP_001069629.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108768690|gb|ABG07412.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693456|gb|ABL90529.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126233738|gb|ABN97138.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 388

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 133 LSEREAGSDAASMRTRAKADGDD-WILNGAKAWITNGGKSSWYTVMAVTDPDKGANGISA 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  V          L  LD 
Sbjct: 192 FMVHIDDEGFTVGPKERKLGIKGSPTTELYFENC--RIPGDRIVGEPGTGFKTALATLDH 249

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 250 TRPTIGAQAVGIAQGAVDAAIAYTKDRKQFGTSISDFQGVQFMLADMAMKVEAARLMVYS 309

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 310 AA-----ARAERGEGNLGFISAA-SKCFASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 363

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 364 DAKITQIYEGT 374


>gi|158314534|ref|YP_001507042.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109939|gb|ABW12136.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 395

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 37/275 (13%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI S E+  +               LTE+  G+D A + +   +  D        ++
Sbjct: 107 YLPKIASGEWTAS-------------FALTEEGAGSDPAGLATSAVRKGDDWIINGSKRY 153

Query: 234 FLSSPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             ++P++D F++ A+ +        +  F+V R        G+       K+G   + T 
Sbjct: 154 ITNAPIADVFMVFARTDPAATGGDGISVFMVER-----DTPGVRVAPKDAKMGQAGSLTA 208

Query: 288 ELEFSNTF----GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341
           ++ F +        + G      G    M+ L +  +  A + V   +  L E++ YA  
Sbjct: 209 DVYFDDVRVDPQTLVGGTAGEGRGYNTAMRCLAHGRIHIAALCVGLAQRLLDESVAYAAT 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +++  +AD A D+ AA AL    A +FD+           RI     K
Sbjct: 269 RSQGGRTIGTYQLIQGLLADSATDLYAARALVKETAAAFDDGSD-------TRIGPSCAK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           Y+  +    +   A++  GG+GY+    + R YR+
Sbjct: 322 YFASEAVGRIADRAVQIHGGAGYMRGVPVERFYRD 356


>gi|319796374|ref|YP_004158014.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598837|gb|ADU39903.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 397

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA+  + +  +DG + L+G K W  +  ++D + + A+ +   G   +  
Sbjct: 136 LSEPDAGSDVAAMAMRAEPTADG-WLLNGTKTWISNGGIADFYCVFAKTDPTGGTRGITV 194

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL-I 316
            + D +  GL      + +     AT  L F N        LG+LN   G    M+ L I
Sbjct: 195 FIVDATTPGLDTSEHIDVMAPHPLAT--LRFENCVVPRTAQLGELN--GGFKLAMRTLDI 250

Query: 317 YLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  S   +  GM R +LAEAI +A+ R + G  L D  + +  + ++A  I +A  L++R
Sbjct: 251 FRASVAAAALGMGRRALAEAIAHAKGRRMFGQTLADFQLTQAKLGEMAALIDSAALLTYR 310

Query: 376 LANSFDEAKSRSEEA 390
            A   D+A+ R   A
Sbjct: 311 AAWMRDDAEQRGAAA 325


>gi|260563101|ref|ZP_05833587.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260153117|gb|EEW88209.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
          Length = 392

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAMAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|239827058|ref|YP_002949682.1| acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           WCH70]
 gi|239807351|gb|ACS24416.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           WCH70]
          Length = 387

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           G + +SG K F S +P  D FI+ A ++  G VG FL+P+     +  GL  ++  + +G
Sbjct: 153 GRWVISGRKTFTSLAPALDYFIVSATIQETGEVGNFLIPK-----TAAGLKIEKTWDTLG 207

Query: 281 ---NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
               RS+  +          L+  L++          L+++ +  + ++    +  EAI 
Sbjct: 208 MRATRSDDVILENVEVEEEALVEMLSLPKAKSHAQGWLLHIPACYLGIAI--AARNEAIA 265

Query: 338 YARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +A+    +     + + P ++R IA + + + AA    + +A+ +D      E+ A  + 
Sbjct: 266 FAKTYQPNSLSHPIAEVPEVRRKIAQMDIHLMAARHFMYSIADQWDRY---PEKRAQMKE 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE-------SPANSILLG--S 446
                KY     A  V+  AM  +GG     E  + RHYR+        PA+ I +   S
Sbjct: 323 ELAAVKYIATNTAVDVVDLAMRIVGGKSLFAENPLQRHYRDVRAGLHNPPADDITVSIVS 382

Query: 447 GNAM 450
           G A+
Sbjct: 383 GRAL 386


>gi|118463794|ref|YP_883895.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165081|gb|ABK65978.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 382

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 54/304 (17%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P + + E               +G+ +TE   G+D+A I +   +  D 
Sbjct: 105 LTTPEQQRRWLPGVVTGE-------------TVLGIAMTEPGTGSDLAGIRTTAVRDGDH 151

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  + D F++  +   +   G  L   L+ D    G    R   KIG 
Sbjct: 152 -YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKGLSL---LVVDADTPGFGRGRNLEKIGL 207

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSL 332
            +  T EL F+        D+ V   P E++         +++  L    +S++   V+ 
Sbjct: 208 HAQDTSELSFT--------DMRV---PAENLLEAEGRGFYQLMKNLPQERLSLAVGAVAA 256

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAATALSFRLANSFDEAKSR 386
           A     E + Y ++RH  G  +      +  +A++A +I  A T L   LA         
Sbjct: 257 AEAVFAETLDYVKQRHAFGAPIAAFQNSQFVLAELATEIDVARTYLDDCLAAHL------ 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E   AR  A   K+W   +        ++  GG GY+ E  +AR + ++   +I  G+
Sbjct: 311 TGELTAAR--AARLKWWTTDLQVRTADRCLQLHGGYGYMREYGVARAFVDARIQTIYGGT 368

Query: 447 GNAM 450
              M
Sbjct: 369 NEIM 372


>gi|317124367|ref|YP_004098479.1| butyryl-CoA dehydrogenase [Intrasporangium calvum DSM 43043]
 gi|315588455|gb|ADU47752.1| butyryl-CoA dehydrogenase [Intrasporangium calvum DSM 43043]
          Length = 395

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 36/277 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG---- 254
           G GLTE   G+D AA  ++        + ++G K F+++  +D    +  V  R G    
Sbjct: 125 GFGLTEPEAGSDAAATRTRAAADGH-EWVVNGSKAFITNSGTD-ITSVVTVTARTGTNGD 182

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
               +   ++  G+P G   +   +K+G           S+T G    D  V   P+E++
Sbjct: 183 GTAAISAIMIPSGTP-GFTVEPAYHKLG--------WHVSDTHGLTFEDCRV---PLENL 230

Query: 313 ---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358
                    + L  LD   +++S + V  A+A       YA+ R   G  +     +   
Sbjct: 231 LGDEGQGFKQFLKTLDDGRIAISALAVGCAQACLELATDYAKTRIAFGRPIGVNQGISFQ 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+ + A+  L+++ A   DE           +  A I K +  + A +    A + 
Sbjct: 291 LADLAVMVEASRTLTYKAAWLKDELHEGRRSVKEVKHAAAIAKLYSTEAAVSATRIATQV 350

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            GG+G++EE  +AR YR+  A  + +G G + V  +L
Sbjct: 351 FGGNGFMEEFPVARFYRD--AKILEIGEGTSEVQRML 385


>gi|301630658|ref|XP_002944433.1| PREDICTED: acyl-CoA dehydrogenase-like [Xenopus (Silurana)
           tropicalis]
          Length = 402

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  DG Y ++G K W      SD  I+LA+          
Sbjct: 137 MGVTEPSTGTDTTRIKTSAVK-KDGRYVVNGQKVWISRVQHSDWMILLARTTPLAEVTKK 195

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L      GL  + + N + + +N   EL F N               
Sbjct: 196 SEG-MSIFMVD--LRAAEKQGLTVRPIPNMVNHETN---ELFFENLEIPEENLIGAEGKG 249

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      L     Y R R V G  +     
Sbjct: 250 FKYILDGLNAE-------RTLI----AAECIGDGYWFLDRVTRYVRERQVFGRPIGQNQG 298

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD  +++ AA  + ++    FD  +S   +A  A+ +A          A A    
Sbjct: 299 VQFPIADAFIEVEAANLMRWKACELFDAHQSMGAQANMAKYLA----------AKASWEA 348

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 349 ANACLQFHGGFGFACEYDVERKFRET 374


>gi|4557231|ref|NP_000007.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           a precursor [Homo sapiens]
 gi|113017|sp|P11310|ACADM_HUMAN RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|71042612|pdb|2A1T|A Chain A, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042613|pdb|2A1T|B Chain B, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042614|pdb|2A1T|C Chain C, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042615|pdb|2A1T|D Chain D, Structure Of The Human Mcad:etf E165betaa Complex
 gi|177964|gb|AAA51566.1| medium-chain acyl-CoA dehydrogenase (EC 1.3.99.3) [Homo sapiens]
 gi|187433|gb|AAA59567.1| medium-chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|13529233|gb|AAH05377.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|56205491|emb|CAI22390.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|119626806|gb|EAX06401.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_c [Homo sapiens]
 gi|123998069|gb|ABM86636.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
           [synthetic construct]
 gi|189069176|dbj|BAG35514.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 277

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 278 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 334 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 386

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 387 VEKLMRDAKIYQIYEGT 403


>gi|227548733|ref|ZP_03978782.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079200|gb|EEI17163.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 401

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 137/348 (39%), Gaps = 35/348 (10%)

Query: 94  WDKVEFH-PAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           W+K E++ P      RR  I DG+     D   +P     A  IRA R   M  +EA  L
Sbjct: 54  WEKAEYNIPGAEEAARRGLIRDGI-----DIEGQP-----AMSIRAKR---MIGMEASRL 100

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + + T+  + A +    ++        + E       PM +  +     LTE   G+D 
Sbjct: 101 DASTATAFGVQAGLAMQSINS-----FGTDEQKAKYLGPMSRMEIRGAFALTEPDHGSDS 155

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGL 270
            A+ +  ++  D        KW     +    ++ A++E G+VG F+V     D    G 
Sbjct: 156 IALETTAKRDGDDWVINGEKKWIGHGSVGHITVVYARMEDGKVGAFIV-----DQDQEGY 210

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-MSVSGMR 329
               +  K   R     E++ +N        L       +  K+L+     +  S  G+ 
Sbjct: 211 EATTITGKGSLRGIPQAEIKLNNVRVSDDRRLPGCKSFRDTAKVLMSTRIGVAWSALGLA 270

Query: 330 VSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +   E +  YA  RH  G  LI   ++++ +AD+ +D+        RL    +  +   +
Sbjct: 271 IDCYEKVLKYASERHQFGRPLIKNQIIQQRLADMLMDVTGMALYCKRLLELEESGEVTEQ 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +AA A++          + A  V A A +  GG G + E  + RH+ +
Sbjct: 331 QAALAKVH-------NTRAARRVAANARDMFGGVGILLENDVIRHFTD 371


>gi|260578533|ref|ZP_05846444.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258603317|gb|EEW16583.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 388

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 22/240 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A++ ++  +  D  + L+G K W  +SP++D  ++ A+ E     F++
Sbjct: 133 FGLTEPDAGSDPASMKTRATRDGDE-WVLNGTKMWITNSPVADVAVVWARTEDGFAGFIL 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            + +E     G     +  K+  R++ T E+   N        L  ++   GP+  +   
Sbjct: 192 EKGME-----GFTAPEIHKKLSLRASITGEIVLDNCRVPDSQRLPKIDTLRGPLTCLNEA 246

Query: 316 IYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y    I+  ++   R SL  AI Y   R V G  L    + +  +A++++++  +  L+
Sbjct: 247 RY---GIIWGALGAARDSLETAIDYTETREVFGKSLSSYQLTQAKLANMSVELNKSVLLA 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +L    D+ +    + +  ++ +        ++A  +  E    +G SG   E S  RH
Sbjct: 304 LQLGRLKDKGELAPHQVSVGKLNS-------TRVALEIARECRTLLGASGITLEYSPLRH 356


>gi|17989163|ref|NP_541796.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|256043345|ref|ZP_05446280.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256111648|ref|ZP_05452638.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
 gi|260564551|ref|ZP_05835036.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265989766|ref|ZP_06102323.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265993126|ref|ZP_06105683.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|17985015|gb|AAL54060.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|260152194|gb|EEW87287.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763996|gb|EEZ10028.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000435|gb|EEZ13125.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 380

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 30/242 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D +A+ ++ +   D  Y + G K F++S  +   +++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASALKTRARLDGD-HYVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G     +++K+G  S+ T  L F+N         G       ++
Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  +I+   +   +AD+A  
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG GY+
Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342

Query: 426 EE 427
            +
Sbjct: 343 AD 344


>gi|88703603|ref|ZP_01101319.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88702317|gb|EAQ99420.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 391

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/389 (21%), Positives = 158/389 (40%), Gaps = 52/389 (13%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLM 152
           ++V F  A+   L   I    H   W  +   +V ++A +    R +LM   +   G + 
Sbjct: 9   EQVMFRDAYRKFLSTEIVP--HMEAWREA--GIVDREAFRKAGERGFLMVWPDEKYGGMG 64

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-----TNKAPMQK-------TSVAIGL 200
            P      ++   T      DW   + SR   P      N+   Q+         + + +
Sbjct: 65  DPDFRFEQVIIEETAYARVGDWYSTLHSRLVGPYFTRFGNEEQCQRFMPKCASGELILAI 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-----VG 254
            +TE   G+D+A + S   +  D  + L+G K ++S+ + +D  I+ A+ +       + 
Sbjct: 125 AMTEPDAGSDLAGMRSTAVE-HDDHWVLNGSKTYISNGINADVVIVAAKTDPENNPHAMT 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V R +E     G    R   K+G ++  T EL F++    L+   NV   P    K 
Sbjct: 184 LFIVERGME-----GFERGRNLEKMGMKAQDTAELFFNDV---LVPKANVLGEP---HKG 232

Query: 315 LIYLDSAIMS---------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            IYL   +           ++  ++S      Y + R   G  L      +  +A++  D
Sbjct: 233 FIYLMEGLAEERLIGACGYLAAAQLSWDLTCEYVKERKAFGKPLAAFQNTQFKLAELRTD 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     +   +F++    + +AA A++   +T     K+A       ++  GG+GY+
Sbjct: 293 LDIAQNYVDQCVAAFNDGALTAVDAAKAKL---VTSELQVKVADI----GVQLHGGAGYM 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
           +E  I+R + ++   +I  GS   M + V
Sbjct: 346 DEYPISRQFTDAKIATIYAGSSEVMKIIV 374


>gi|85703119|ref|ZP_01034223.1| glutaryl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672047|gb|EAQ26904.1| glutaryl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 407

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++  +   G Y +SG K W  +SP++D F++ A+    +G++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAVRTDSG-YRISGTKMWISNSPIADVFVIWAKSDAHDGKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+   N       LL ++    GP    
Sbjct: 208 F----VLEKGM-KGLSAPKVGGKLSLRASVTGEIVMDNVEVPESALLPNVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIA 367
                L+ A   ++   +  AE   +A R++       ++P+ +       +A++  +I 
Sbjct: 259 --FGCLNRARYGIAWGVMGAAEFCWHASRQYGLDRKQFNRPLAQTQLFQLKLANMQTEIT 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+    DEA +  E       M  + K   C  A  +   A +  GG+G  EE
Sbjct: 317 LGLQAALRVGRLMDEANAAPE-------MISMIKRNNCGKALDIARHARDMHGGNGISEE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVIRH 375


>gi|94972228|ref|YP_594268.1| acyl-CoA dehydrogenase-like [Deinococcus geothermalis DSM 11300]
 gi|94554279|gb|ABF44194.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 430

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE  GG+D  A+ ++  +  +  Y L G+K W  +SP++D  ++ A+  EG +  F+
Sbjct: 174 FGLTEPDGGSDPGAMRTRAHRDGNA-YVLHGNKMWITNSPVADLAVVWAKDDEGIIRGFI 232

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP         G    ++  K+  R++ T E+         +   NV  G       L  
Sbjct: 233 VPT-----DTPGFSAPKIHRKMSLRASVTGEIVLEEC---RIPAENVLPGSGGLKSPLSC 284

Query: 318 LDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L SA   ++      +   L  A+ Y   R   G  +  + +++  +  +A D +A   L
Sbjct: 285 LTSARFGIAWGAMGALEAVLQTALDYTGSRRTFGKPIAARQLVQDKLVRMATDHSAGLLL 344

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++RL    D  +    + +YA       K    ++A      A E +GG+G   E  + R
Sbjct: 345 AWRLGQLKDTGRMNYAQVSYA-------KRNNVRVALQGARLARELLGGNGITTEYPVIR 397

Query: 433 H 433
           H
Sbjct: 398 H 398


>gi|312115776|ref|YP_004013372.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220905|gb|ADP72273.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 130/297 (43%), Gaps = 30/297 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +H+       S E      AP     +   LG++E   G+D+A++ +  +K   G
Sbjct: 93  MATPALHR-----FGSEELKRAWLAPTIAGDMVACLGVSEPGAGSDVASLKTTAKK-DGG 146

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            Y ++G K ++++ M +D   +LA              +VP         G+  Q+++ K
Sbjct: 147 DYVINGSKMWITNGMKADWCCLLANTSDDKPHRNKSLIVVPM-----DAKGITRQKIR-K 200

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE 334
           +G  S+ T +L F +       +L  + G     ++L +    L  A  S++ +   +  
Sbjct: 201 LGMFSSDTAQLFFDDVR-VPQTNLIGAEGMGFTFQMLQFQEERLWGAANSLTMLDRLIDA 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y R+R   G  ++D  V+   +A++  ++ A  +L++R    +   +  ++ A+ A+
Sbjct: 260 TIDYTRQRKAFGKSILDNQVVHFRLAELRTEVEALRSLTWRAVEEYISGRDVTKLASMAK 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +        C ++   V    ++  GG G+  +  ++R  R+    SI  G+   M+
Sbjct: 320 LK-------CGRLIREVTDSCLQYWGGMGFTWDNPLSRAMRDGRLVSIGGGADEVML 369


>gi|111026396|ref|YP_708679.1| long chain acy-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825239|gb|ABH00521.1| probable long chain acy-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 27/265 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV-----EGR 252
           + +TE   G+D+A I++  +   DG  Y L+G K F++   ++D  + + +      E R
Sbjct: 125 IAMTEPGTGSDLANISATAKLSEDGSHYVLNGSKTFITGGVLADRILTVCRTSPFDPENR 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVS 305
                +  L+ D S  G    R   KIG +++ T EL + +       LLG+     +  
Sbjct: 185 RSGLSI--LVVDTSSEGFSVGRKLQKIGLKTSDTAELSYDDVMVPVSDLLGEEGKGFSYL 242

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           T  +   ++ I  D++  + + ++     AI Y   R V G  +      K  +A+ + +
Sbjct: 243 THNLAQERLTIAFDASATASAAVQ----HAIAYTTDRKVFGKPVAAFQNTKFVLAECSTE 298

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A   +        D  +   ++AA A++       +  + A  +I + ++  GG GYI
Sbjct: 299 LQAVQLMVDNALELHDRGELSVQDAARAKL-------FSTEAAGRIIDKCLQLHGGYGYI 351

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IAR Y ++  + I  G+   M
Sbjct: 352 LEYPIARLYADTRVSRIFGGTSEVM 376


>gi|17534899|ref|NP_495142.1| Acyl CoA DeHydrogenase family member (acdh-8) [Caenorhabditis
           elegans]
 gi|868175|gb|AAA68712.1| Hypothetical protein K05F1.3 [Caenorhabditis elegans]
          Length = 412

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------- 252
           +TE   G+D+  + ++  K  D  Y ++G K W      +  F +LA+ +          
Sbjct: 144 VTEPGAGSDVNGVKTKAVKQGDE-YIINGSKAWITGGGHAKWFFVLARTDDNPKTPAGKA 202

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +N +G R + T  + F +     +   N+   P    
Sbjct: 203 FTAFIV-----DGDTPGITRGKKENNMGQRCSDTRSITFEDV---RVPKENILGAPGAGF 254

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D     V+   V LA     E+  YA  RH  G  + +   ++  IAD+A+++
Sbjct: 255 KVAMGAFDLTRPQVAASAVGLAWRCLDESTKYAMERHAFGTPIANHQGVQFMIADMAINL 314

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +   ++R A   D     S  A+ A+  A  T       A      A +  GG+G+  
Sbjct: 315 ELSRLFTYRAAAEVDSYGVSSYNASIAKCFAADT-------ANVAATNACQIFGGAGFNC 367

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 368 EYPVEKLMRDAKIYQIYEGT 387


>gi|78060538|ref|YP_367113.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965088|gb|ABB06469.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 616

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 53/315 (16%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
           AP++          TE + GTD+ A+  +   +   IY + G K ++S+ M +      +
Sbjct: 148 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAVDGEKVYISAGMHELTENTLY 207

Query: 244 IMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQR-----LKNKIGNRSNATVELEFS 292
            +L +++        + C +VPR   D     L         L  K+G +  A   L F 
Sbjct: 208 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELQSNHVDCIGLPRKMGLKGCANTHLVFG 267

Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
           +   T G+LLG   NV       ++++  ++ A MS     V +A      A+ YA RR 
Sbjct: 268 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 322

Query: 344 VSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
               I            +++   ++R + D+   +     L  +LA +       EA   
Sbjct: 323 QGRPIERASNTNAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 382

Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ A   R      ++ PI K +    A  +   A++  GG GY +   + ++ R+    
Sbjct: 383 ADPAEIERHRKLQLLLTPICKAFISDQAWRICESAIQVHGGLGYTDASPVEQNARDVKIL 442

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+      D++
Sbjct: 443 SIWEGTNYIQAQDLV 457


>gi|2392312|pdb|1EGE|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392313|pdb|1EGE|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392314|pdb|1EGE|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392315|pdb|1EGE|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|49259281|pdb|1T9G|A Chain A, Structure Of The Human Mcad:etf Complex
 gi|49259282|pdb|1T9G|B Chain B, Structure Of The Human Mcad:etf Complex
 gi|49259283|pdb|1T9G|C Chain C, Structure Of The Human Mcad:etf Complex
 gi|49259284|pdb|1T9G|D Chain D, Structure Of The Human Mcad:etf Complex
          Length = 396

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 135 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 194 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 253 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 308

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 309 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 362 VEKLMRDAKIYQIYEGT 378


>gi|158317337|ref|YP_001509845.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158112742|gb|ABW14939.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 404

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 51/328 (15%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +AG  MS   TS ++  + +     +  +W P+ F    DP   A            ++E
Sbjct: 82  DAGIGMSIMGTSLAVAGIASAGTFDQLGEWVPQCFGDAADPKVAA----------YCVSE 131

Query: 205 KRGGTDIAA--ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GR-VGCF 256
              G+D+++  + ++  + +D  + ++G K W  +  +++  +++A V+    GR    F
Sbjct: 132 PEAGSDVSSMRVRARYDEATDE-WVINGQKAWITNGGIANVHVVVASVDPTLRGRGQAAF 190

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG------------- 300
           +VP     G+P GL   R   K+G R++ T ++   +       LLG             
Sbjct: 191 VVP----PGTP-GLTGNRKIKKLGLRASHTADVFLDDVRVPGRCLLGGKEKLDERLARAR 245

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           + + S G        +   +      G+ R +   A+ YAR R   G  +I    +  A+
Sbjct: 246 EGSRSAGQAALQTFEMTRPTVGAQAVGIARAAYEYALDYARHREQFGRPIITNQAVAFAL 305

Query: 360 ADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           AD+ ++I AA  L +R A    +E +  + E + +++ A     W  +       +A++ 
Sbjct: 306 ADMRMEIDAARLLIWRAAWMGRNERRFEAGEGSMSKLKAGEVAVWATE-------KAVQI 358

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
           +GG+GY  E  + R YR++   +I  G+
Sbjct: 359 LGGAGYSREHPVERMYRDAKIYTIFEGT 386


>gi|296167856|ref|ZP_06850039.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896981|gb|EFG76604.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 381

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 40/297 (13%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P + + E               +G+ +TE   G+D+A I +   +  D 
Sbjct: 104 LTTPEQQQRWLPGVVTGE-------------TVLGIAMTEPGTGSDLAGIRTAAVRDGDH 150

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+S+    D F++  +        L   +++ G+P G    R   KIG  +
Sbjct: 151 -YVVNGAKTFISNGQCGDLFVVAVRTSPDRHTGLSLLVVDAGTP-GFSRGRNLEKIGLHA 208

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
             T EL F++       LLG+     G  + M+ L    L   + +V+     LAE + Y
Sbjct: 209 QDTSELTFTDMRVPVANLLGE--EGRGFYQLMQNLPQERLALGVGAVAAAEAILAETLDY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393
            R+R   G  +      +  +A++A +I  A       L+  LA     A++       A
Sbjct: 267 VRQRTAFGTPIAGFQHSQFVLAEVATEIDVARTYLDDCLAQHLAGELTAARA-------A 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           R+     K+W   +        ++  GG GY+ E ++AR + ++   +I  G+   M
Sbjct: 320 RL-----KWWTTDLQVRTADRCLQLHGGYGYMREYAVARAFVDARIQTIYGGTNEIM 371


>gi|264679087|ref|YP_003278994.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209600|gb|ACY33698.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 619

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 70/325 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSS---PMSDAFI-- 244
           + L+E + G+ ++ I ++ +   DGI          Y L G+K ++SS    M++  +  
Sbjct: 157 MALSEPQAGSSLSDIATRAE--PDGIEHESDALGPRYRLKGNKMWISSGDHEMTENIVHL 214

Query: 245 MLAQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE 288
           +LA++ G  G           F+VP+ L D      G  N +    L +K+G R      
Sbjct: 215 VLAKIPGADGKTIPGVKGISLFIVPKKLVDAEGRLTGERNDVALAGLNHKLGWRGTTNTL 274

Query: 289 LEFSN-------------------TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSV 325
           L F                       G+L+G     L      + + +I I + ++++ +
Sbjct: 275 LNFGEGKYPVRGQHGGGLDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAASMLGM 334

Query: 326 SGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRL 376
           +G   SL  A    + R +  G          +I+   +KR +         A AL+   
Sbjct: 335 AGYHASLEYAQSRPQGRPIGEGGKDASRPQSRIIEHADVKRMLLAQKAYCEGALALNLLC 394

Query: 377 ANSFDEAKS-RSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           A   DE  +  +++AA AR    ++ P+ K W  +      + A++  GG GY  + ++ 
Sbjct: 395 ARLVDEQYTGEAQQAAEARLLLEVLTPVAKSWPSEFCLEANSLAIQIHGGYGYTRDFAVE 454

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           +++R++  N I  G+     +D+L 
Sbjct: 455 QYWRDNRLNMIHEGTHGIQAMDLLG 479


>gi|302523398|ref|ZP_07275740.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302432293|gb|EFL04109.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 393

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           ++E+  G+D+ A+  +  +  DG + L G K W  S+ ++   ++ A  +   G   +  
Sbjct: 137 ISEREAGSDVGAMRCRATEDGDG-WVLDGVKTWITSAGVARYLVVFAVTDPGAGSRAISA 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316
            +      G+ Y   + K+G + + T E+ F  T    G LLG+          M++ L 
Sbjct: 196 FVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLGERG------RGMRVALG 249

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   +S+    + +A+     A+ Y + R   G  + D   ++  +AD+A+ + +A  
Sbjct: 250 TLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLADMAVRVESARQ 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A     + SR+ +  Y        K      A AV  +A++ +GG GY  +    
Sbjct: 310 LVYAAAAR---SASRAPDLTY---FGAAAKCLASDTAMAVTTDAVQLLGGYGYTRDFPAE 363

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 364 RMMRDAKITQIYEGT 378


>gi|57997529|emb|CAI45986.1| hypothetical protein [Homo sapiens]
          Length = 454

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 25/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 193 VTEPGAGPDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 251

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 252 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 310

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 311 DKTRPVV----AAGAVGLAQRALDEATRYALERKTFGKLLVEHQAISFMLAEMAMKVELA 366

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 367 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 419

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           + +  R++    I  G+     L V
Sbjct: 420 VEKLMRDAKIYQIYEGTSQIQRLIV 444


>gi|85706103|ref|ZP_01037198.1| Acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669267|gb|EAQ24133.1| Acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 377

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 112/290 (38%), Gaps = 37/290 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG 230
           + W PK+ S E             +   L +TE   G+D+  I ++   + DG  Y LSG
Sbjct: 106 RKWLPKMVSGE-------------MVGALAMTEPAAGSDVQGIKTRA--VRDGNAYRLSG 150

Query: 231 HKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++      I++A      EG  G  LV  ++E  +  G    R   K+G  +  T
Sbjct: 151 QKTFITNGQHAELIIVAAKTDPKEGAKGISLV--VVETEAAQGFTRGRNLEKVGMHAGDT 208

Query: 287 VELEFSNTF----GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
            EL F N        L G+     G  + M+ L    L  A  +   M  ++   I Y +
Sbjct: 209 SELFFDNIEIPPENILGGE--EGRGFYQMMQQLPQERLIIACGAQGAMEGAVERTITYCK 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG ++     +  +A+     A   A                E+AA A       
Sbjct: 267 EREAFGGPILQFQNTRFKLAECQTKTAVCRAFLDACITEHMRGDLSVEKAAMA------- 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           KYW       V+ + ++  GG GY++E  IA  + ++    I  G+   M
Sbjct: 320 KYWLTDSQGEVLDDCLQLHGGYGYMQEYDIAEMWADARVQRIYGGTNEIM 369


>gi|311029636|ref|ZP_07707726.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 391

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 44/272 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-------QVEGR 252
           + +TE   G+D+A I +  +   D  Y ++G K F+++ +    +++A       Q + R
Sbjct: 133 IAMTEPGTGSDLANIKTTARLEGDH-YIVNGAKTFITNGIHADLVIVAVKTDTEIQPQHR 191

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298
               LV   +E G   G    R  +K+G  S  T EL F +               F +L
Sbjct: 192 GVSLLV---IERGH-QGFSRGRKLDKVGLHSQDTAELFFEDCKVPKENLLGEEGRGFLYL 247

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +  L       +  ++L+ + + I S       L   I Y + R   G  +      +  
Sbjct: 248 MDKL-------QQERLLVGIGAQIASEE----MLQSTIDYVKSREAFGRPVSQFQNTQFK 296

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA++A ++    A   +L      A   + E    ++   + K+   ++A  +  + M+ 
Sbjct: 297 IAEMATEVEMGRAFLDQLI-----ADHIAGEDVVTKV--SMAKWKLTEIARNIATQCMQL 349

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+EE  IAR YR+ P  SI  G+ + M
Sbjct: 350 HGGYGYMEEYKIARRYRDIPVASIYAGTNDIM 381


>gi|262278424|ref|ZP_06056209.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262258775|gb|EEY77508.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 381

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 116/311 (37%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYVLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R ++     Y + R   G  +      +  +A   +D  A  A   R    
Sbjct: 247 -ASTAIGAIRGAIDLTTAYVKERQAFGQPISQFQNTRFVLAQAKIDELATAAFYERNIAL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YQEGKLDVETAA-------ALKSFSSDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|260557055|ref|ZP_05829272.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260409661|gb|EEX02962.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 30/286 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ + +  G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEANRAGFTKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTFGFLLGDLNVS-TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N     +  L +   G +  MK L +  +  AI+  +G   + A  + Y + R   
Sbjct: 225 LFFDNVRVPKVNLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAF 284

Query: 346 GGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
           G  +      +  +A++  +I    T L   +    DE  S    AA         KY  
Sbjct: 285 GKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAA--------AKYKI 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 337 SDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIM 382


>gi|160961497|ref|NP_001104286.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pan troglodytes]
 gi|158514237|sp|A5A6I0|ACADM_PANTR RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|146741394|dbj|BAF62353.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, nuclear
           gene encoding mitochondrial protein [Pan troglodytes
           verus]
          Length = 421

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPRENVLIGDGAGFKVAMGAF 277

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 278 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 334 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 386

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 387 VEKLMRDAKIYQIYEGT 403


>gi|310800406|gb|EFQ35299.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 435

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/297 (20%), Positives = 123/297 (41%), Gaps = 40/297 (13%)

Query: 143 MAQLEAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           MA++ +G    L   S   A  + +  T    + W P +F+ E              +  
Sbjct: 118 MARIPSGVPLALAGASNVGAPPIFVAGTTEQKRRWLPGLFTWE-------------TSFC 164

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH-KWFLSSP----MSDAFIMLAQVEGRV 253
           L +TE   G+D++AI +  +K  DG  Y ++G  KW   +P    M+ A  M  + +G +
Sbjct: 165 LAITEPTAGSDVSAIRTTAKKTPDGAHYVVNGRKKWITGAPWATHMTTAVRMGEKGQGGI 224

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTG 307
              +VP  L     +G+  +++ N   N   ++      V++   +  G       + T 
Sbjct: 225 SLLVVPLTL-----SGITIRKIHNSGHNAGGSSWVILEDVKVPVDHLLGRENEGFPIITR 279

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                + ++ +D    +    RV L+EA+ +A  R   G  L    +++  +  +A +I 
Sbjct: 280 NFNKERFILTVDCNRQA----RVCLSEALQHAHDRETFGKTLASHQIIRHKLTTLAREIE 335

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              A   ++A        ++++ A +RI   + K    ++    + E+ +  GG GY
Sbjct: 336 GHWAWLEQIAYHVKVHGWQTKDIA-SRIA--LAKIQGGRIVEQAVRESQQIHGGMGY 389


>gi|118478404|ref|YP_895555.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis str. Al Hakam]
 gi|118417629|gb|ABK86048.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis str. Al Hakam]
          Length = 395

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EGR  VG F++PR  
Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P ++R + ++ L++  A    +++A  +
Sbjct: 259 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 318

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  +  +Y
Sbjct: 319 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHHYY 368


>gi|221066317|ref|ZP_03542422.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711340|gb|EED66708.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 619

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 70/325 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSS---PMSDAFI-- 244
           + L+E + G+ ++ I ++ +   DG+          Y L G+K ++SS    M++  +  
Sbjct: 157 MALSEPQAGSSLSDIATRAE--PDGVEYESDALGPRYRLKGNKMWISSGDHEMTENIVHL 214

Query: 245 MLAQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE 288
           +LA++ G  G           F+VP+ L D      G  N +    L +K+G R      
Sbjct: 215 VLAKIPGADGKTIAGVKGISLFIVPKKLVDAEGRLTGERNDVALAGLNHKLGWRGTTNTL 274

Query: 289 LEFSN-------------------TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSV 325
           L F                       G+ +G     L      + + +I I + ++++ +
Sbjct: 275 LNFGEGRYPVRGQHGGGLDGRGAGAIGYRVGQPGEGLKCMFHMMNEARISIGMAASMLGM 334

Query: 326 SGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRL 376
           +G   SL  A    + R +  G          +I+   +KR +         A AL+   
Sbjct: 335 AGYHASLEYAQSRPQGRPIGEGGKDASRPQSRIIEHADVKRMLLAQKAYCEGALALNLLC 394

Query: 377 ANSFDEAKS-RSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           A   DE  + +S+EAA AR    ++ P+ K W  +      + A++  GG GY  + ++ 
Sbjct: 395 ARLVDEQYTGQSQEAAEARLLLEVLTPVAKSWPSEFCLEANSLAIQIHGGYGYTRDFAVE 454

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           +++R++  N I  G+     +D+L 
Sbjct: 455 QYWRDNRLNMIHEGTHGIQAMDLLG 479


>gi|120402970|ref|YP_952799.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955788|gb|ABM12793.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 392

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 42/257 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVE------G 251
           LTE   G++ + + ++  +  DG    + ++G K F++ +P ++ F+  A+         
Sbjct: 127 LTEPGAGSNPSGLRTKAVRDGDGSCSGWIINGQKRFITNAPNANLFVTFARSRPADDKGA 186

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TG 307
            +  FLVP         G+       K+G     T ++ F+        D+ V      G
Sbjct: 187 GIAVFLVP-----ADTPGVEVGAKDKKMGQEGAWTADVNFT--------DVRVPDAALVG 233

Query: 308 PVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             ED+     + S        A ++V   + +L E++ YA      G  + D  +++  +
Sbjct: 234 GSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVTYAATATQGGTAIGDFQLVQAML 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD    + A  AL    A  +   + R       RI     K +C +MA  V   A++  
Sbjct: 294 ADQQTGVMAGRALVRETARQWVTGEDR-------RIAPSAAKLFCTEMAGKVADLAVQIH 346

Query: 420 GGSGYIEERSIARHYRE 436
           GGSGY+ E  + R YR+
Sbjct: 347 GGSGYMREVPVERIYRD 363


>gi|167537016|ref|XP_001750178.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771340|gb|EDQ85008.1| predicted protein [Monosiga brevicollis MX1]
          Length = 384

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 19/255 (7%)

Query: 202 LTEKRGGTDIAAI-TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLV 258
           +TE   G+D+  + TS  QK  D  + ++G+K W   +  ++ F +LA+ +         
Sbjct: 120 VTEPGCGSDVNGVQTSAVQKGDD--WVINGNKMWITGAGHANWFFVLARTDKDAKASKAF 177

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI- 314
              + DG   G+   R ++ +G R++ T  + F +       +LG+  V  G +  MK  
Sbjct: 178 TGFIVDGDTPGITLGRKEDNMGQRASDTRAVTFEDVVVPKENVLGE--VGKGFLLAMKAF 235

Query: 315 -LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   +    +V   + +L EA  Y+  R   G  +     +   +AD+ ++  AA  L+
Sbjct: 236 DITRPEVGAGAVGLAQRALDEATKYSLERKTFGVPIAKHQAVAHMLADMEINTQAARWLT 295

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A   D+ +  +  A+ A+  A      C +       +A++  GG+GY     + + 
Sbjct: 296 LRGAWELDQGRPPTFYASQAKAFAADNAIRCAR-------DAVQIFGGNGYSRSMPVEKL 348

Query: 434 YRESPANSILLGSGN 448
            R++   +I  G+G 
Sbjct: 349 VRDAAIFNIYEGTGQ 363


>gi|159897487|ref|YP_001543734.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890526|gb|ABX03606.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 423

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 40/285 (14%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-------IYCLSGHKWFLSSPMSDAFIM 245
           +T V   + +TE + G+D +AI +   +  D        IYC  G    LS   S   ++
Sbjct: 131 ETPVWGSMAMTEPQAGSDTSAIRTTAVRDGDSWILNGEKIYCTGGR---LSLEESQGLVV 187

Query: 246 L-AQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           + A V+ ++G   +   ++E G+P G+   +L++K+G R++ T  + F++    F  +LG
Sbjct: 188 VWATVDPKLGRAGMKAFVVEAGTP-GMQVTKLEHKMGIRASDTAAVVFTDCRIPFDNVLG 246

Query: 301 DLNV---------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI 350
           +  +         +  P      +   D+   +V+   + +A A     R  +S  GI I
Sbjct: 247 NPEIPKAEATAASADAPKGFKGAMKTFDATRPAVAASALGIARAALELLREQLSLAGIPI 306

Query: 351 --DQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             D PV     ++R + ++     AA  L+ + A   D  ++ + EA+  ++ A      
Sbjct: 307 RDDVPVNEMSAIERDVLELEAQHKAAWLLTLKAAWMMDSGEANTVEASACKVKA------ 360

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             + A  +  +A+E +G  GY  E    +  R++  N I  G+G 
Sbjct: 361 -GEAATVITQKAVELLGPLGYTRELLAEKWMRDAKINDIFEGTGQ 404


>gi|320168237|gb|EFW45136.1| ATP-binding cassette subfamily E [Capsaspora owczarzaki ATCC 30864]
          Length = 428

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 24/247 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFL 257
           +TE   G+D+A + +   K  D  Y ++G K W     +++ + +LA+        G   
Sbjct: 165 VTEPGAGSDVAGLKTTAVKKGDE-YIINGSKMWITGGGVANWYFVLARTGDANTPTGRAF 223

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310
              ++E  +P G+   + ++ +G R + T  + F       SN  G   G   ++ G  +
Sbjct: 224 TGFIVESDTP-GITKGKKEDNMGQRCSDTRGITFEDVRVPASNVVGVEGGGFKLAMGAFD 282

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +  +    A  ++   R +L EA+ YA +R   G  + +   +   IAD+A+ +  + 
Sbjct: 283 HTRPSV----AAGALGLARRALHEAVLYALQRKTFGKPIAEHQSVSNIIADMAVGVETSR 338

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              +R A   D     +  A+ A+ +A  T       A    ++A++  GG G+     +
Sbjct: 339 LAVWRAATELDAGNRNTYYASIAKCLAGDT-------AVKNASDAIQVYGGLGFNSGSVV 391

Query: 431 ARHYRES 437
           ++ YR++
Sbjct: 392 SKLYRDA 398


>gi|262370549|ref|ZP_06063874.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262314349|gb|EEY95391.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 31/274 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
           M        + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  I++ +
Sbjct: 126 MASGETVTAIAMTEPGTGSDLQAVRTTA--VLDGDDYIINGSKIFITNGYLCDMAIVVCK 183

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +  ++ +    G    +  NKIG +   T EL F +       LLG    
Sbjct: 184 TGDSEKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCELFFDHVRVPKENLLG---- 239

Query: 305 STGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
               +E M  ++ +          AI+  +G   +LA  + Y + R   G  +      +
Sbjct: 240 ----MEGMGFMMLMKELAWERMLVAIICQAGAEAALAHTVQYTKERKAFGKTVSSFQNTR 295

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  +I    A         D       E +     A   KY   +M   V+ E +
Sbjct: 296 FKLAELRTEIDFCRAY-------LDRCMQLQLEESLGIDAAAAAKYKISEMFSKVVDECL 348

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 349 QLHGGYGYMLEYPIARAYLDNRANRIYAGTNEIM 382


>gi|256393670|ref|YP_003115234.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359896|gb|ACU73393.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 389

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 20/264 (7%)

Query: 194 TSVAIGLG-----LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           T +A G G     L+E   G+D A + ++  +  D  Y L+G K W  ++ +S+ + ++A
Sbjct: 116 TPLAAGSGMFSYCLSEPDAGSDAAGMKTRADRDGDD-YVLNGVKRWITNAGVSEYYTVMA 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +       +   + +    G+ +   + K+G + + T E+ F N    +  D  +   
Sbjct: 175 VTDPTARSKGISAFVVEKGDEGVTFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAE 232

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +  LD   ++++   + +A+     A +Y + R   G  + D   ++  +AD+
Sbjct: 233 GTGFATAMRTLDHTRVTIAAQALGIAQGALDYASNYVKERKQFGKPIADFQGIQFMLADM 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ + AA  L++  A     AKS   ++      A   K +   +A  V  +A++ +GG 
Sbjct: 293 AMKLTAARQLTYTAA-----AKSERGDSDLTYFGAA-AKCFASDVAMEVTTDAVQLLGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY ++  + R  R++    I  G+
Sbjct: 347 GYTKDYPLERMMRDAKITQIYEGT 370


>gi|229179369|ref|ZP_04306723.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           172560W]
 gi|228604267|gb|EEK61734.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           172560W]
          Length = 382

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNLLHRYY 355


>gi|160899902|ref|YP_001565484.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160365486|gb|ABX37099.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 389

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+  + +   D  Y L+G K W  +  ++D + + A+     G   +
Sbjct: 133 FALSEPDAGSDVAAMACEARLEGDH-YVLNGAKTWISNGGIADFYCVFARTGEAPGARGI 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
              + D    G         I     AT+  +      S   G       ++      M 
Sbjct: 192 SAFVVDADTPGFSIGERIELIAPHPLATIRFDNCRIPVSQRLGEPGQGFKLAM-----MT 246

Query: 314 ILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + I+  S   +  G  R +L E +  A+ R + G  L D  + + A+ D+   I A+  L
Sbjct: 247 LDIFRASVAAAALGFARRALDEGLARAKSRRMFGQTLGDLQLTQAALGDMDTAIDASALL 306

Query: 373 SFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++R A   D  K+R+  EAA A++ A        + A AVI  A++  GG+G +    + 
Sbjct: 307 TYRAAWMRDVKKTRTTREAAMAKMTA-------TESAQAVIDRALQMFGGAGVVSGMPVE 359

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
             YRE  A  I  G+     L +   L K
Sbjct: 360 TLYREIRALRIYEGATEVQKLIIARELLK 388


>gi|119775928|ref|YP_928668.1| acyl-CoA dehydrogenase-like protein [Shewanella amazonensis SB2B]
 gi|119768428|gb|ABM00999.1| acyl-CoA dehydrogenase-like protein [Shewanella amazonensis SB2B]
          Length = 391

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 31/255 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D A + ++ ++I DG Y ++G K W  +SP++D F++ A
Sbjct: 125 PKLATGEWVGCFGLTEPDVGSDPAGMKTRAERI-DGGYRITGAKMWITNSPIADVFVVWA 183

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           +++G +  F++ + ++     GL   +++ K   R++ T E+   N       LL ++  
Sbjct: 184 KLDGAIRGFVLEKGMK-----GLSAPKIEGKFSLRASITGEIVMDNVEVGEDALLPNVEG 238

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAI 359
             GP         L+ A   ++   +  AE   +A R++    I  ++P     + ++ +
Sbjct: 239 LKGP------FGCLNKARYGIAWGALGAAEFCWHAARQYGLDRIQFNRPLAANQLYQKKL 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMEC 418
           AD+  +I        +     D       +A     ++ I +  C K +  A IA  M  
Sbjct: 293 ADMQTEITTGLFACLQAGRLMD------VDALPVEAISLIKRNSCGKALDIARIARDMH- 345

Query: 419 IGGSGYIEERSIARH 433
            GG+G  +E  + RH
Sbjct: 346 -GGNGISDEFHVIRH 359


>gi|311109844|ref|YP_003982695.1| acyl-CoA dehydrogenase, N-terminal domain-containing protein 25
           [Achromobacter xylosoxidans A8]
 gi|310764533|gb|ADP19980.1| acyl-CoA dehydrogenase, N-terminal domain protein 25 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 152/381 (39%), Gaps = 49/381 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-YLMAQLE 147
           P  + W+  E  PA H L ++         + D  F  + +   +        Y +A  E
Sbjct: 23  PFADEWEAAEIFPA-HELFKK---------MGDLGFLGITKPTEYGGMGLDFSYGVAAGE 72

Query: 148 A-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           A G++ +  V+  + V   M TP +   +      RE+     AP     V + +G++E+
Sbjct: 73  AMGYVRAQGVSMGAGVQTDMATPALAT-FGSDALKREF----LAPAIAGDVVVSIGVSEQ 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML-----AQVEGRVGCFLVP 259
             G+D+A++ ++ ++  D  Y +SG K W  +   +D   +L      Q        +VP
Sbjct: 128 GAGSDVASLKTRARRDGDD-YVISGSKMWITNGTQADWICLLCNTSEGQTHKNKSMIIVP 186

Query: 260 RLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
            L E G    G+  Q++K K G   + T ++ F        N  G          G +  
Sbjct: 187 -LREGGKRVKGVEVQKIK-KFGMWCSDTAQIFFDEVRVPVRNRIG------EEGMGFIYQ 238

Query: 312 MKILIYLDSAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           MK          +     V L  E   Y R+R   G  L+D   ++  +A++  ++ A  
Sbjct: 239 MKQFQEERLGAAARRLAAVQLIEETADYLRQRVAFGKPLLDNQFIQFKLAELKTELEALR 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +    ++       E A+ A++ A        +++  +    M+  GG GY  +  +
Sbjct: 299 GLVYMATQTYINGGDVVELASMAKLKAG-------RLSREIADWCMQFQGGMGYTWDNFV 351

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR+    SI  G+   M+
Sbjct: 352 SRAYRDFRLGSIGGGADEVMM 372


>gi|46201506|ref|ZP_00054900.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 553

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 47/304 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +  ++ L  T    ++W PKI S E  PT                TE   G
Sbjct: 245 GSLGTRSEIAGELIRLGGTEEQKQEWLPKIASGEILPTAV-------------FTEPNTG 291

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----GCFLV----P 259
           +D+ ++ ++  K  D  Y ++G+K W   +  +D   +L +         G  ++    P
Sbjct: 292 SDLGSLRTRAVKQGDE-YVVTGNKTWITHAARTDVMTLLVRTNPDTKDWKGLSMMIAPKP 350

Query: 260 RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---K 313
           R  E  +P    G+    +K  +G R     EL F    GF +   N+  G VE     +
Sbjct: 351 RGTE-ANPFPAEGMTGGEIK-VLGYRGMKEYELGFD---GFKVPAANL-LGGVEGQGFKQ 404

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++   +SA +  +   V +A+      + YA  R   G  +   P +   IA +A++   
Sbjct: 405 LMETFESARIQTAARAVGVAQCAMEVGLKYANERVQFGKPIYQFPRVGGKIAWMAVETMI 464

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE      EA  A+++A        ++A A    A++  GG+GY EE 
Sbjct: 465 ARQLTYFSAREKDEGHRCDIEAGMAKLLA-------ARVAWANADNALQVHGGNGYAEEY 517

Query: 429 SIAR 432
            I+R
Sbjct: 518 PISR 521


>gi|326382029|ref|ZP_08203722.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199455|gb|EGD56636.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 389

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +K  D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 133 LSEREAGSDAASMKTRARKDGDS-WVLNGSKCWITNGGKSTWYTVMAVTDPEKGANGISA 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            +      G     L++K+G + + T EL F N       ++GD             L  
Sbjct: 192 FMVHKDDPGFTVGPLEHKLGIKGSPTAELYFENCTIPEDRVIGDEGTGF-----KTALAT 246

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    ++    V +A+     AI Y + R   G  +     ++  IAD+A+ + AA  +
Sbjct: 247 LDHTRPTIGAQAVGVAQGALDAAIAYVKDRKQFGKSISQFQGVEFMIADMAMKVEAARLM 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A     A++   E     I +  +K     +A  V  +A++  GG+GY  +  + R
Sbjct: 307 VYTAA-----ARAERGEGNLGFI-SSASKCLASDVAMEVTTDAVQLFGGAGYTTDFPVER 360

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 361 MMRDAKITQIYEGT 374


>gi|269218882|ref|ZP_06162736.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269211993|gb|EEZ78333.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 377

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 33/313 (10%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G L  P+     +  L T  R   D    KIFS  Y  T +         +   +TE   
Sbjct: 78  GRLGGPTYILYQLPGLETVAREGTDEQREKIFS--YLGTGEQ-------VLNYAMTEPSA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+    + +   +  DG   L+GHK F +S M   + +++A+    +  +     L D S
Sbjct: 129 GSSWNDMRTTYTR-RDGKVYLNGHKTFQTSGMRVPYLVVMARNADDMDVY--TEWLVDMS 185

Query: 267 PNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             G+  + L +K+G R ++        VELE S+ FG    + N     V D  +  +L 
Sbjct: 186 KPGIAKEPL-HKLGLRMDSCAEVYFDDVELEESDLFG---SEGNGFMRGVADFDLERFL- 240

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ +      +  +A  YA +R   G  +  + +++   AD+ + +     + F +A  
Sbjct: 241 VALTNYGQAYCAFEDAAKYANQRVQGGQAIARRQLIQLKFADMQVRLTNMRNMLFEIAWK 300

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K         R    + KY+C   A  V+ +A++ + G G   +  + R +R+   
Sbjct: 301 HDVGK-------LGRGDCSMAKYYCSHAAFEVVDDALQILAGVGITGDHRVQRFFRDLRV 353

Query: 440 NSILLGSGNAMVL 452
           + I  G+   M+L
Sbjct: 354 DRISGGTDEMMIL 366


>gi|262377284|ref|ZP_06070508.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262307737|gb|EEY88876.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 32/287 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ S E             V   + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QQWLPKMASGE-------------VVTAIAMTEPGTGSDLQAVRTSA--VLDGDDYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNNDKGSANLSLIMVEAERAGFSKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG   +  G +  MK L +  L  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPTENLLGLEGM--GFMMLMKELAWERLIVAIICQAGAEAAFAHTVKYTKERQ 282

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      +  +A++  +I        R        +   + AA A       KY 
Sbjct: 283 AFGKSISHFQNTRFKLAELRTEIDVCRTYLDRCMQLQLNHELGVDAAAAA-------KYK 335

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 336 ISEMYSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIM 382


>gi|259506057|ref|ZP_05748959.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259166345|gb|EEW50899.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 408

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 116/288 (40%), Gaps = 40/288 (13%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           S   + ++ +    + W P +          A  +KT       LTE   G+D  ++ + 
Sbjct: 113 SMGSINILGSEEQRRRWLPDM----------AKFRKTGA---FALTEPNHGSDSVSLETS 159

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQR 274
            ++  D  + L+GHK W  +    D  ++ A+ E   +V  F+V +      P G   + 
Sbjct: 160 ARREGDS-WVLNGHKRWIGNGHAGDIIVVYARDEADQQVKAFVVEKQRNGEYPPGYRAEV 218

Query: 275 LKNKIGNRS---------NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +  K G R+         N  +  E   T      D+N            +  +S   ++
Sbjct: 219 ITGKTGKRAILQGDIVIDNLRIPEENRLTNCHSFKDVNRVLAATRGG---VAWESTGHAM 275

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +G  +    A  YA +RH  G  +    +++  +A +  D+     L  R+A    E + 
Sbjct: 276 AGFEL----AAQYALQRHQFGSPIASYQLVQTKLAHMLADVVENQLLCVRMA----ELQE 327

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           R E   ++  MA +TK    K A ++  EA + +GG+G +    IARH
Sbjct: 328 RGE---FSTPMASLTKMTTAKNALSICREARDMMGGNGLLLNNHIARH 372


>gi|226308694|ref|YP_002768654.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187811|dbj|BAH35915.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 396

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M++   TP     + P++ S E             +     ++E   G+D+AAI+++ 
Sbjct: 99  AHMISAHGTPEQKAKYLPRLASGE-------------LTGAFSMSEPALGSDVAAISTKA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF--IMLAQVEG------RVGCFLVPRLLEDGSP-NG 269
           ++   G Y ++G K +L++  S     +++   EG       +   L+ +    G    G
Sbjct: 146 KRTESGDYVITGQKMWLTNGGSSTLVAVLVKTDEGAEKPHNNLTTILIEKPAGFGEVLPG 205

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK-ILIYLDSAIMSVSG 327
           L       K+G +   T E+ F    GF +G   V  G P    + ++  ++   ++V+ 
Sbjct: 206 LTIPGKLEKMGYKGIDTTEMIFD---GFEIGAEEVLGGTPGLGFRHMMDGVEVGRVNVAA 262

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ YA++R   G  + +   +   IA++   + AA  +    A   D 
Sbjct: 263 RACGIAQRAFELAVTYAKQRETFGKPIAEHQAIAFRIAEMGTKVEAAHLMMVNAARLKDS 322

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +          + A + KY   +    V  ++    GG GY +E  I R  RE+P   +
Sbjct: 323 GERND-------VAAGMAKYLASEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAP--FL 373

Query: 443 LLGSGNA 449
           L+G G +
Sbjct: 374 LIGEGTS 380


>gi|258591982|emb|CBE68287.1| Acyl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 596

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 41/348 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIML 246
           P+  T   +G   LTE   G+D  +  ++     DG  Y L+G K F++ +  +D +I  
Sbjct: 137 PLLATGAKVGSYALTEPGSGSDALSAKTRAVLSPDGTAYILNGTKQFITNAAFADLYITY 196

Query: 247 AQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           A+V G +   F++     D    G+     + K+G +  +T  +   N       LL ++
Sbjct: 197 AKVNGDKFTAFII-----DKDTPGVALGPEEKKMGIKGTSTRSVILENARVPADNLLYEI 251

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                   D+  +  L      +   +++L EA+ YA++R   G  +    ++++ +A++
Sbjct: 252 GRGHKVAFDLLNIGRLKLGAGCLGLCKLALREAVRYAKQRTQFGQPIASFGLIQKKLAEM 311

Query: 363 ALDIAAATALSFRLAN----------------SFDEAKSRSEEAAYARIMAPITKYWCCK 406
            +    A ++ +R A                   D AK   E A    +   I K +  +
Sbjct: 312 TIRTYVAESMIYRTAGLIERNLSGIDQESERAGLDTAKGVEEYA----VECSINKVYASE 367

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
               V  E ++  GG GYI +    R YR++  N +  G+        +N L   T LF 
Sbjct: 368 ALDYVADETVQIFGGYGYIADFPAERIYRDARINRLFEGTNE------INRLLIPTTLFR 421

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           +        L ++ +K++T L    S   +++G    L E+I L  SA
Sbjct: 422 RALQG-RLPLFTAAQKLVTDLLSYSS--SQEEGYGDPLHEQIRLLESA 466


>gi|86748287|ref|YP_484783.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86571315|gb|ABD05872.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 404

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D   + ++ +K++DG Y L+G K W  ++P++D F++ A+    + ++  
Sbjct: 146 FGLTEPDAGSDPGGMKTRAEKVADG-YRLTGTKMWISNAPIADVFVVWAKSAAHDNQIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   ++  K+  R++ T E+           LL +++   GP    
Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEEALLPNVSGLKGP---- 255

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE      R++       ++P     ++++ +AD+  +I 
Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCFQRARQYTLDRKQFNRPLAATQLVQKKLADMETEIT 313

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S R+    DE +   E       M  I K   C  A  +   A +  GG+G   E
Sbjct: 314 LGLQASLRVGRLMDEGRVAPE-------MISIVKRNNCGKALDIARVARDMHGGNGIQIE 366

Query: 428 RSIARH 433
             + RH
Sbjct: 367 YHVMRH 372


>gi|332090835|gb|EGI95927.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           5216-82]
          Length = 382

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|328866543|gb|EGG14927.1| acyl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 644

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ +   K  D  Y L+G K F+S        M+    G  G   +  L
Sbjct: 388 LTEPGAGSDAASLMTTAVKSGDH-YILNGSKAFISGGGDSDVYMVMVRTGDKGAKGISCL 446

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
           L +    GL + + + K+G  +  T  L F       +N  G      N++   +   ++
Sbjct: 447 LVEKDTPGLSFGKKEEKLGWNTQPTRALIFEDCRVPIANLIGKEGQGFNIAMNALNGGRL 506

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I       S+ G +  L  A  + + R   G  L     ++  +AD+A  + A+  +  
Sbjct: 507 NI----GACSLGGAQACLVSARDHLKVRQQFGKPLSQFQSLQFQLADLATKLYASRLMIR 562

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D+          A +   + K + C     +   A++  GG GY+++  + R+ 
Sbjct: 563 QGAKMLDDKDPS------ASVYIAMAKLFACDNCFDICDGALQMHGGYGYLKDYPVERYL 616

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL GS   M
Sbjct: 617 RDLRVHRILEGSDAVM 632


>gi|156379349|ref|XP_001631420.1| predicted protein [Nematostella vectensis]
 gi|156218460|gb|EDO39357.1| predicted protein [Nematostella vectensis]
          Length = 580

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 135/301 (44%), Gaps = 39/301 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA----------QV 249
           LTE   G+D A+I ++ +   DG  + L+G K W  +  ++D F + A          +V
Sbjct: 142 LTEPSSGSDAASIKTRAELSKDGKHWILNGGKLWISNGGIADIFTVFAKTPIKDPKTGEV 201

Query: 250 EGRVGCFLVPR---LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +V  F+V R    +E G P        + K+G +++ T E+ F N     +   NV  
Sbjct: 202 KDKVTAFIVERGFGGVESGPP--------EKKMGIKASNTAEVYFDNV---PVPVENVLG 250

Query: 307 GPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+ +  L++    ++G     M+  + +A+ +A  R   G  +     ++  IA
Sbjct: 251 GEGNGFKVAMNILNNGRFGMAGALSGTMKGLIEKAVDFAANRTQFGAKIETFGAIQEKIA 310

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A+      ++++ ++ + D        A   ++ A I+K +  + A  V  E ++ +G
Sbjct: 311 RMAMLHYVTESMAYMISANMDSG------ATDFQVEAAISKVFASEAAWFVADECIQILG 364

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSS 479
           G+G+++   + R  R+     I  G+ + + L + L  L+      + L   L+  +G+ 
Sbjct: 365 GTGFMKSAGVERVMRDLRIFRIFEGTNDILRLMIALTGLQGAGKRLQALQKQLKNPVGNI 424

Query: 480 G 480
           G
Sbjct: 425 G 425


>gi|158313445|ref|YP_001505953.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158108850|gb|ABW11047.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 388

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 49/267 (18%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR- 252
           S+ +  G+TE   GTD   IT+  +K+ DG Y ++G K W   +  S   I++A+   R 
Sbjct: 119 SLHVCFGVTEPNAGTDTTRITTFAEKV-DGGYRINGRKVWITKAGDSQKMILIARTTKRE 177

Query: 253 --------VGCFLVP--------RLLEDGSPNGLC-YQRLKNKIGNRSNATVELEFSNTF 295
                   +  FL+         R +     N +  Y+   +      +A +  E    F
Sbjct: 178 ESARPTDGMSLFLIDIDRKHIDLRAIPKMGRNAVSSYEVFIDNYFVPESARIGEE-GKGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +LL  LN         +IL+  ++  +     R SL +A  YA+ R     I+ D+P+ 
Sbjct: 237 KYLLDGLNPE-------RILLAHEALGIG----RASLEKATRYAKER-----IVFDRPIG 280

Query: 356 KRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +       +A+  + + AA  ++ + A  +D+      EA  A       K+ C      
Sbjct: 281 QNQGIAFPLAEAQIRLDAAELMARKAAWRYDQGLPCGPEANMA-------KWLCADAGFK 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
              +A++  GG GY  E  + R++RES
Sbjct: 334 AADQAIQTHGGMGYAREYHVERYFRES 360


>gi|325087848|gb|EGC41158.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 526

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 57/285 (20%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 250 ICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMN 309

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            +  LL + S  G         +G R      +  S T      D+ V   PVE++    
Sbjct: 310 GISVLLIERSAGG---------VGTRKMDCQGMATSGTTYVTFEDVKV---PVENLIGKE 357

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 358 NQGFKVIMMNFNHERMGIIIQCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHM 417

Query: 363 ALDIAAA----------------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           A  I A+                T  +FRL  +    K++S            T  +C +
Sbjct: 418 ARQIEASHNWLENLVFQCQSMDDTEAAFRLGGAIAGLKAQST----------TTFEFCAR 467

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  +        GG G      I R YR+  A +I  GS   M+
Sbjct: 468 EASQIFGGLSYTRGGQG----GKIERLYRDVRAYAIPGGSEEIML 508


>gi|299068201|emb|CBJ39420.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CMR15]
          Length = 376

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 32/274 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIML 246
           AP+ +  +     LTE   G+D AA+ +   +  DG  + L+G K F++S   +D  I++
Sbjct: 110 APLARGEMLGAFCLTEPHVGSDAAALRTTATR--DGERWVLNGVKQFITSGKHADVAIVM 167

Query: 247 AQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
           A  +   G      FLVP      +  G    RL++K+G  S+ T ++   +       L
Sbjct: 168 AVTDKAAGKRGISAFLVPT-----ATPGYIVARLEDKLGQHSSDTAQIVLEDCRIPADCL 222

Query: 299 LGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           LG       ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     
Sbjct: 223 LGSAGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQA 278

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++A  I  A  + +  A+  D  +   +EAA A++ A        +MA  V ++
Sbjct: 279 VQFRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNAS-------EMAERVCSD 331

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++  GG GY+ +  + R YR+     I  G+ +
Sbjct: 332 AIQVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|225629002|ref|ZP_03787036.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|254711771|ref|ZP_05173582.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256029596|ref|ZP_05443210.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|260167316|ref|ZP_05754127.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261319403|ref|ZP_05958600.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261756726|ref|ZP_06000435.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           F5/99]
 gi|265986598|ref|ZP_06099155.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|225616848|gb|EEH13896.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|261298626|gb|EEY02123.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261736710|gb|EEY24706.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           F5/99]
 gi|264658795|gb|EEZ29056.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 39/266 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             LTE   G+D   IT++  +  D  + ++G K F+S      FI+L  V G       P
Sbjct: 123 FALTEPGAGSDARGITTKAVRDGDH-WVINGVKQFISHADIADFIVLIAVTGVDETPRGP 181

Query: 260 R-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312
           R      L D +  GL  + +K+ +    N T+           L D+ V +  +  E+ 
Sbjct: 182 RKRFTAFLLDKTLPGLRVEPMKSIVTRGYNPTM---------VYLEDVRVHSDDILGEEG 232

Query: 313 KILIYLDSAIMSVSGMRVSLA-------EAI-----HYARRRHVSGGILIDQPVMKRAIA 360
           K     D+A   +   RV+LA       E I      +A  R   G  + +   +   +A
Sbjct: 233 K---GFDTANEWLYDGRVALAAHCVGRSERIFEMTKEWAGTRKAFGKTIGEFQGVGFKVA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+DI     +         EA  + E     R  A +  YWC +M   V  +A++  G
Sbjct: 290 NMAVDIKLGDLM-------VKEAAWKIENQTMNRTEASMVNYWCSEMVFRVADDAVQIFG 342

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G +EE  I R +R++    I  G+
Sbjct: 343 GMGVMEEFPIQRFWRDARIERIWEGT 368


>gi|194438552|ref|ZP_03070641.1| acyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|253773350|ref|YP_003036181.1| acyl-CoA dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161755|ref|YP_003044863.1| putative acyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|194422562|gb|EDX38560.1| acyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|242377419|emb|CAQ32170.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253324394|gb|ACT28996.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973656|gb|ACT39327.1| predicted acyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|253977850|gb|ACT43520.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|323973925|gb|EGB69097.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
          Length = 383

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|25026880|ref|NP_736934.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23492160|dbj|BAC17134.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 432

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 27/246 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCF 256
             LTE   G+D  ++ +  ++  D  + L+GHK W  +    D  ++ A+ E   +V  F
Sbjct: 166 FALTEPNHGSDSVSLETSARREGDS-WVLNGHKRWIGNGHAGDIIVVYARDEADQQVKAF 224

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRS---------NATVELEFSNTFGFLLGDLNVSTG 307
           +V +      P G   + +  K G R+         N  +  E   T      D+N    
Sbjct: 225 VVEKQRNGEYPPGYRAEVITGKTGKRAILQGDIVIDNLRIPEENRLTNCHSFKDVNRVLA 284

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                   +  +S   +++G  +    A  YA +RH  G  +    +++  +A +  D+ 
Sbjct: 285 ATRGG---VAWESTGHAMAGFEL----AAQYALQRHQFGSPIASYQLVQTKLAHMLADVV 337

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L  R+A    E + R E   ++  MA +TK    K A ++  EA + +GG+G +  
Sbjct: 338 ENQLLCVRMA----ELQERGE---FSTPMASLTKMTTAKNALSICREARDMMGGNGLLLN 390

Query: 428 RSIARH 433
             IARH
Sbjct: 391 NHIARH 396


>gi|332343414|gb|AEE56748.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           UMNK88]
          Length = 383

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTSYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|331642293|ref|ZP_08343428.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|331039091|gb|EGI11311.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
          Length = 401

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|261755272|ref|ZP_05998981.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261745025|gb|EEY32951.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 338

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y ++G K F+S   S D ++ + +  G  G   +  
Sbjct: 83  LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 140

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316
           L+      GL +   + K+G  +  T  + F N        LGD  V        KI + 
Sbjct: 141 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 194

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAAT 370
                 L+ A  S+ G + + A+A+ Y    H + G  ID+   ++  +AD+  ++AA+ 
Sbjct: 195 GLDGGRLNIAACSLGGAQAATAKALEYCAE-HKAFGQTIDRFQALQFRLADMETELAASR 253

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +  A+  D    ++ +A     MA   K +    +  V  EA++ +GG GY+ +  I
Sbjct: 254 MLLYTAASKLDR---KTHDAGKWSAMA---KRFVTDTSFNVANEALQLLGGYGYLHDYGI 307

Query: 431 ARHYRESPANSILLGSGNAM 450
            +  R+   + IL G+   M
Sbjct: 308 EKLVRDLRVHQILEGTNEIM 327


>gi|296136055|ref|YP_003643297.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295796177|gb|ADG30967.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 609

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 147/365 (40%), Gaps = 82/365 (22%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++    TPR  + +A   F+  +  T             + L+E++ G+ ++ I
Sbjct: 123 TVGNANLLMAHGTPRQQQIFARAEFAGRWAGT-------------MCLSEQQAGSSLSDI 169

Query: 215 TSQGQKISDGI----------YCLSGHKWFLSS---PMSDAFI--MLAQVEGRVG----- 254
            ++   + DG           Y L G K ++S+    ++D  +  +LA++ G  G     
Sbjct: 170 ATRA--MPDGSDFEADPLGPRYRLFGSKMWISAGEHELTDNIVHLVLAKIPGADGKLVPG 227

Query: 255 -----CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---------- 293
                 F+VP++L D      G  N +    L +K G R      L F +          
Sbjct: 228 ARGISLFIVPKMLVDASGQLTGHRNDITLAGLNHKCGWRGTPNTLLSFGDGRYPAGGAPG 287

Query: 294 TFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI- 348
             G+ +G     L      + + +I + L +A++ ++G   +LA    YAR+R     + 
Sbjct: 288 AIGWRVGAAGEGLRCMFHMMNEARIGVGLSAAMLGMAGYEAALA----YARQRPQGRPVG 343

Query: 349 ------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEEAA 391
                       +I+   +KR +         A AL    A   DE     A + SE A 
Sbjct: 344 PSGKDPSQPQVSIIEHADVKRMLLAQKTYAEGALALDLYCARLVDEQRTGGATAASEAAL 403

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+     
Sbjct: 404 LLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQA 463

Query: 452 LDVLN 456
           LD+L 
Sbjct: 464 LDLLG 468


>gi|302875468|ref|YP_003844101.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307689079|ref|ZP_07631525.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302578325|gb|ADL52337.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 377

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 18/267 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G+D+  + ++  K  D  Y L+G+K F+S +P++D F+++A+ E   G   +
Sbjct: 120 FAITEVESGSDVFQMQTKATKDCDE-YILNGNKMFISNAPIADVFVVVAKTENEEGKETL 178

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
                +    G+   +  +K+G  +    EL  +N     +   N+     + MK+  Y 
Sbjct: 179 TAFFVEKDFPGVSIGKKISKMGLEACPMAELCLNNC---RVPKENIIYKEHKGMKVANYA 235

Query: 318 -----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +      +  M   + + I YA  R      + +   +   I D+ + I  A  L
Sbjct: 236 LQMERVFEFASHIGAMERQMEKCIKYANERKQFDKPIKEYQSISNKIVDMKVKIELAQLL 295

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            F++A   D  K+         + + I K +  +   A   + ++  G  GY +E  +  
Sbjct: 296 LFKIAWKADHKKN-------IFLDSSIFKLFVSESYVATCLDTIQIHGAYGYSKEYGLES 348

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE 459
             R+S A++I  G+       + +L++
Sbjct: 349 ELRDSIASTIYSGTSETQRNIIFSLID 375


>gi|237810726|ref|YP_002895177.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|237504940|gb|ACQ97258.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
          Length = 623

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 131/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+Y ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVYAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YA RR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYACRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|224006279|ref|XP_002292100.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
           pseudonana CCMP1335]
 gi|220972619|gb|EED90951.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
           pseudonana CCMP1335]
          Length = 470

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 28/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCF 256
            GLTE   G+D +++ ++ +       + L+G K W  +SP++D FI+ A+  EG++  +
Sbjct: 206 FGLTEPNHGSDPSSMETRSRYDAGTNEFILNGSKNWITNSPIADIFIVWARNEEGKIKGY 265

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKI 314
           L+    E G+P GL   +++ K   R++AT  +   +       +LNV+   GP      
Sbjct: 266 LI----EKGTP-GLDAPKIEGKGSLRASATGMIFLEDVRVPAANELNVTGLKGPFS---- 316

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD+  +I+ A
Sbjct: 317 --CLNNARFGIAWGALGAAEDCFHRAREYVMERKQFGAPLGANQLIQKKLADMMTEISLA 374

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                ++           E+ A +  M  + K   C  +  +   A + +GG+G  +E  
Sbjct: 375 RLGCLQVGRQM-------EKQAASPSMVSLIKRNSCGKSLDIARMARDMLGGNGISDEYH 427

Query: 430 IARH 433
           I RH
Sbjct: 428 IIRH 431


>gi|254284088|ref|ZP_04959056.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680291|gb|EED36640.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 395

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D   + ++ + +  G Y L+G K W  +
Sbjct: 118 FGSEAQREKYLPKLATGEWIGCFGLTEPDYGSDPGGMVTRARTVEGG-YSLTGAKMWISN 176

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  +G +  F    +LE G P GL   +++ K+  R++ T E+   +  
Sbjct: 177 SPIADVFVVWAKTDDGVIRGF----VLEKGMP-GLSAPKIEGKLSLRASITGEIVMEDV- 230

Query: 296 GFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP- 353
             ++G+  +  G VE +K     L++A   ++   +  AE   +A R +       ++P 
Sbjct: 231 --VVGEDAMLPG-VEGLKGPFSCLNNARYGIAWGALGAAETCWHAARDYTMERKQFNRPL 287

Query: 354 ----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++  +AD+  +I+       R     D  +   E       +  + K   C  + 
Sbjct: 288 AANQLIQLKLADMQTEISLGLQGCHRAGVLMDAGQIAPE-------LISLIKRNSCGKSL 340

Query: 410 AVIAEAMECIGGSGYIEERSIARH 433
            V  +A + +GG+G  +E  + RH
Sbjct: 341 EVARKARDMLGGNGISDEYPVMRH 364


>gi|145593285|ref|YP_001157582.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302622|gb|ABP53204.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 398

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 31/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ-------VEGR 252
           ++E   G+D++AITS+   + DG  Y L+G K W  +   +     L +       V G 
Sbjct: 129 MSEPECGSDVSAITSRA--VRDGADYVLNGQKMWLTNGAYASVVATLVKTDTGADSVYGN 186

Query: 253 VGCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVS 305
           +  FL+ +  E G   +  GL       K+G +   T E+            L G   V 
Sbjct: 187 MSTFLLEK--EPGFGETAPGLTIPGKIEKMGYKGVETTEMILDGVTVPESAVLGGADQVG 244

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G  + M  I +   +      G+ +   E A  YA++R   G  L     +   +A++ 
Sbjct: 245 RGFYQMMDGIEVGRVNVAARACGISIRAFELAAAYAQQRRTFGQPLAKHQAVAFKLAEMG 304

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA AL    A   D  +    EA  A+++A     +C +    V+ EA    GG G
Sbjct: 305 TKIEAAHALMVNAARLKDAGQRNDVEAGMAKLLA---SEYCAE----VVQEAFRIHGGYG 357

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  I R  RE+P   +L+G G + +
Sbjct: 358 YSKEYEIERLMREAP--FLLIGEGTSEI 383


>gi|331653095|ref|ZP_08354100.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
 gi|331049193|gb|EGI21265.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
          Length = 401

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|225011693|ref|ZP_03702131.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
 gi|225004196|gb|EEG42168.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
          Length = 599

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 51/373 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++  +  FI+ A++E    +  F+
Sbjct: 151 LTEPGAGSDANSGKTKAVLSDDGTHYLISGQKMWISNAGFASVFIVFARIEDDKNITGFI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP+       NG+ +   +NK+G  S++T ++ FS T    +   N+  G  E  KI   
Sbjct: 211 VPK----DDANGITFGDEENKLGIHSSSTRQVFFSET---KVPVENMLAGRGEGFKI--- 260

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPV-----MKRAIADIALD 365
              A+ +++  R+ L  A   A+RR  S         I  + P+     +K  +A +A  
Sbjct: 261 ---AMNALNVGRIKLGVACLDAQRRITSAAVQYANERIQFNTPIAQFGAIKEKLAHMATS 317

Query: 366 IAAATALSFRLANSFDE------AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIA 413
             A  +  +R A   ++      A+  + + A  +      I   + K    +       
Sbjct: 318 CYAGESACYRAAYDVEKRIQSFVAEGLTHQEAELKGVEDFAIECSLLKVGASEDIQNAAD 377

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDVLNLLEKGTNLFEQLFSTL 472
             ++ +GG G+  +  +   +R++    I  G+     +L V  LL+KG      L S +
Sbjct: 378 HGIQIMGGMGFSADMPMESAWRDARIGRIYEGTNEINRMLSVGMLLKKGMKGQLDLMSAV 437

Query: 473 EQDLGSSGKKVITILRDSIS-LCKEDKGLARFLTEKIALASSAAALYRAGMND------- 524
            +   +S K+   I  D  S L +E + LA F    I L  +AA  Y A +++       
Sbjct: 438 MK-AATSIKEDTNIPTDGGSILAEERRLLANFKQLFIVLTGNAAQKYGAKLDEHQQILLA 496

Query: 525 IADVFLENRFLDN 537
           ++D+F+E  F ++
Sbjct: 497 LSDIFIEIYFTES 509


>gi|159043607|ref|YP_001532401.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911367|gb|ABV92800.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 396

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 41/259 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC--- 255
            G+TE   G+D   + ++ +K   G Y ++G K + S  M SD  ++LA+      C   
Sbjct: 130 FGVTEPTTGSDTTQLKTRAEKTEKGTYLVNGQKVWTSRAMESDLMLLLARTTPADQCTKR 189

Query: 256 ------FLVPRLLEDGSPNGLCYQRLKNKIGNRS-----------NATVELEFSNTFGFL 298
                 FL+   + D   NGL  +++   I + S             T+  E    F ++
Sbjct: 190 SDGMSVFLLD--MRDALGNGLELRKIDAMINHNSCEVFLDNLEIPADTLIGEEGRGFRYI 247

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +  +N         +ILI    A   +   +  + +A+ YA  R V G  +     ++  
Sbjct: 248 VDSMNAE-------RILI----AYECIGDAKFFIRKAVEYANERVVFGKPIGANQGLQFP 296

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD    + AA  +  + A  FD     +EEA  A+++A    +   ++        M+ 
Sbjct: 297 IADAYAKMCAAELMVNKAAAIFDAGGKAAEEANMAKLLAADASWAAAEV-------CMQT 349

Query: 419 IGGSGYIEERSIARHYRES 437
            GG  +  E  I R +RE+
Sbjct: 350 YGGFAFAREYGIERKWREA 368


>gi|25284663|pir||B90929 probable oxidoreductase ECs2402 [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 gi|25284697|pir||F85777 probable oxidoreductase Z2723 [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12515700|gb|AAG56682.1|AE005392_8 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
 gi|13361869|dbj|BAB35825.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
 gi|209769058|gb|ACI82841.1| putative oxidoreductase [Escherichia coli]
 gi|209769060|gb|ACI82842.1| putative oxidoreductase [Escherichia coli]
 gi|209769062|gb|ACI82843.1| putative oxidoreductase [Escherichia coli]
 gi|209769064|gb|ACI82844.1| putative oxidoreductase [Escherichia coli]
 gi|209769066|gb|ACI82845.1| putative oxidoreductase [Escherichia coli]
          Length = 401

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|302546539|ref|ZP_07298881.1| putative glutaryl-CoA dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302464157|gb|EFL27250.1| putative glutaryl-CoA dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 19/260 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P   +   IG  GLTE   G+D A + +  ++  DG  + L+G K W  
Sbjct: 113 FGSEEQKQQWLPRMASGEVIGCFGLTEPDHGSDPAGMRTYAKR--DGTDWVLTGRKMWIT 170

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A  +  +  F+VP         G     +K+K   R++ T EL      
Sbjct: 171 NGSVAGVAVVWAHTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDEVR 225

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L +    I+  ++   R S   A+ YAR R   G  +    
Sbjct: 226 LPADAVLPEVTGLRGPLSCLSHARYGIIWGALGAARASFTSALEYARTREQFGRPIGGFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  +  
Sbjct: 286 LTQAKLADMAVELHKGVLLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI-- 343

Query: 414 EAMECIGGSGYIEERSIARH 433
                +G +G   E  + RH
Sbjct: 344 -----LGANGISLEYPVMRH 358


>gi|238757528|ref|ZP_04618713.1| hypothetical protein yaldo0001_30220 [Yersinia aldovae ATCC 35236]
 gi|238704290|gb|EEP96822.1| hypothetical protein yaldo0001_30220 [Yersinia aldovae ATCC 35236]
          Length = 105

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 6   IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEY 64
           +YRR   + +   +  +F  NQP      N + SD +L  A+         + L  +G  
Sbjct: 1   MYRREMEDGMEWQTHLVF--NQPEPLSNSNLFLSDMALQDAITREHAGWDAETLSQIGLQ 58

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           + S  + EL  +AN N P+L  Y   G+R D+V FHPAWH L+
Sbjct: 59  LGSMESLELGWLANANPPELLRYDTAGQRLDQVRFHPAWHVLM 101


>gi|170046519|ref|XP_001850810.1| acyl-CoA dehydrogenase [Culex quinquefasciatus]
 gi|167869287|gb|EDS32670.1| acyl-CoA dehydrogenase [Culex quinquefasciatus]
          Length = 424

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 38/311 (12%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S++  + T    K + PK+ S EY  +               L+E   G+D   + +  +
Sbjct: 138 SLMIKLGTEEQKKKYLPKLCS-EYSGS-------------FALSEPSAGSDAFGLKTTAK 183

Query: 220 KISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           K  DG  Y L+G K W  +S MS  F+++A      G   +   + D    G    + ++
Sbjct: 184 K--DGNHYILNGSKMWISNSDMSGMFLIMANANPSAGYRGITTFIVDRDMEGFTVGKREH 241

Query: 278 KIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           K+G  ++ T +L   N         G        + G + + +I I        +   + 
Sbjct: 242 KLGICASGTCQLHLDNVRVPEENILGEFGKGYQYAAGFLNEGRIGI----GAQMIGCAQG 297

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L   I Y   R   G  +     M+  +A IA +I AA  L +  A        R +EA
Sbjct: 298 CLDATIPYLLERKQFGSDIYSFQSMQHQVATIATEIEAARLLVYNAA--------RLQEA 349

Query: 391 AYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +  A + K +  ++A     + ++ +GG G+ ++    + YR+    +I  G+ N 
Sbjct: 350 KVPFLKQAAMAKLYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEGTSNM 409

Query: 450 MVLDVLNLLEK 460
            +  +  +++K
Sbjct: 410 QLSTIAKVMKK 420


>gi|81245349|gb|ABB66057.1| putative oxidoreductase [Shigella boydii Sb227]
          Length = 401

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|305664638|ref|YP_003860925.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88708655|gb|EAR00891.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 380

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 33/288 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
           W  + +  E           T   IG   L+E   G+D  A + +   I  G  Y L+G 
Sbjct: 96  WGLETYGNEEQKQKYLTKLATGEVIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYILNGT 153

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  +   ++ ++++AQ +   G   +  L+ +    G      +NK+G R + T  L 
Sbjct: 154 KNWITNGGTAEFYLVIAQTDREKGHKGINALIVEKGMEGFEIGPKENKLGIRGSDTHSLN 213

Query: 291 FSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           F++             FGF      +S G        I + +  + ++     LA+   Y
Sbjct: 214 FNDVKVPKENRIGDDGFGFKFAMKTLSGGR-------IGIAAQALGIAAGAYELAK--KY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  + +   +   +AD+   I AA  L ++ A   D   +     A A++   
Sbjct: 265 SKERKAFGTEIANHQAIAFKLADMHTKIEAARLLVYKAAKDKDNGDNYDLSGAMAKL--- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +  ++A     EA++  GG+G++++  + R  R++    I  G+
Sbjct: 322 ----YASQVAMETSVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGT 365


>gi|325001924|ref|ZP_08123036.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 386

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 35/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254
           + +TE   G+D+  I +  ++ +DG + L+G K F+++  ++D  I++A+ +        
Sbjct: 129 IAMTEPGTGSDLQGIATNAKQDADGDWILNGSKTFITNGILADLVIVVAKTDPDAKHLGF 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPV 309
             F+V R +E G   G   +RLK K+G ++  T EL F++     + D N    V  G V
Sbjct: 189 TLFVVERGME-GFERG---RRLK-KVGMKAQDTAELSFTDV---RVPDANRLGEVGQGFV 240

Query: 310 EDMKIL------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             M+ L      I + SA  + + +R++L     Y + R   G  + +    +  +A++ 
Sbjct: 241 YLMQNLAQERLSIAVASAAGAEAAVRMTL----EYTKDRKAFGRPVSNFQNTRFELAEMD 296

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            + + A     R      E++    +AA A       K+W   +   V+   ++  GG G
Sbjct: 297 TEASIARIFVDRCIRQHVESELSVPDAAKA-------KWWTSDLQNRVVDRCVQLHGGYG 349

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  IAR + +S   +I  G+   M
Sbjct: 350 YMLEYPIARAFVDSRVQAIYGGTNEIM 376


>gi|321260949|ref|XP_003195194.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461667|gb|ADV23407.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 424

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 21/127 (16%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D +++ +   K +DG + L+G K W  ++P++D F++ A
Sbjct: 152 PQLATGEIVGCFGLTEPNHGSDPSSMETTATKTTDG-WVLNGSKTWISNAPVADLFVIWA 210

Query: 248 QV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +V     +G+V  FLV    E G+P GL    +KNK+  R++ T  +         + D+
Sbjct: 211 RVVENGEKGKVRGFLV----EKGTP-GLSAPAIKNKMSLRASITGSI--------FMEDV 257

Query: 303 NVSTGPV 309
            +S G V
Sbjct: 258 KLSNGSV 264


>gi|213514668|ref|NP_001133108.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial [Salmo
           salar]
 gi|197631959|gb|ACH70703.1| acyl-Coenzyme A dehydrogenase C-4 to C-12 straight chain [Salmo
           salar]
 gi|223648080|gb|ACN10798.1| Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Salmo salar]
          Length = 422

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 31/261 (11%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D+A + ++ +K  D  Y ++G K W  +   ++ + +LA+ +    C    
Sbjct: 160 GVTEPGAGSDVAGLKTRAEKKGD-EYVVNGQKMWITNGGKANWYFLLARTDADPKCPTSK 218

Query: 256 ----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
               F+V     D    G+   R +  +G R + T  + F +     +   NV  G    
Sbjct: 219 AFTGFIV-----DADSPGILVGRKELNMGQRCSDTRGITFEDV---RIPKENVLIGEGAG 270

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+     LA     EA  YA  R   G ++ +   +   +A++A+ 
Sbjct: 271 FKIAMGAFDKTRPPVAAGATGLAQRALDEATGYALERKTFGKLIAEHQAVSFLLAEMAMK 330

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  V ++A++  GG+G+ 
Sbjct: 331 VELARMGWQRSAWEVDNGRRNT-------YYASIAKAFAGDIANQVASDAVQVFGGNGFN 383

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 384 SEYPVEKLMRDAKIYQIYEGT 404


>gi|187927232|ref|YP_001897719.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780069|ref|ZP_07674821.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724122|gb|ACD25287.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921101|gb|EFP66746.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 376

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP      +  G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKTAGKRGISAFLVPT-----NTPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 EEGAGYKMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  +  A  + +  A+  D      +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRVDVARQMVWHAASLKDAGLPCLKEAAMAKLNAS-------EMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|16264448|ref|NP_437240.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium
           meliloti 1021]
 gi|15140585|emb|CAC49100.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium
           meliloti 1021]
          Length = 387

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +   G    
Sbjct: 128 LAMSEPGAGSDVVSMKLKADKRGD-RYVLNGSKMWITNGPDADVLVVYAKTDPAAG---- 182

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           PR     L+E   P     Q+L +K+G R + T EL F++     + + NV  G  E +K
Sbjct: 183 PRGITAFLVEKAFPGFSAGQKL-DKLGMRGSNTSELIFTDCE---VPEENVLGGVGEGVK 238

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD   + +S      M   L   + Y   R   G  + +  +M+  +AD+ + + 
Sbjct: 239 VLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQGKLADMYVTMN 298

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A + D  ++  ++AA   +       +  + A A+  EA++ +GG+GY  +
Sbjct: 299 AARAYVYAVAAACDRGETARKDAAGCIL-------YAAEKATAMALEAIQALGGNGYTND 351

Query: 428 RSIARHYRESPANSILLGS 446
               R  R++    I  G+
Sbjct: 352 YPAGRLLRDAKLYEIGAGT 370


>gi|84501722|ref|ZP_00999894.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84390343|gb|EAQ02902.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 385

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 47/274 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGR 252
           + + +TE   G+D+A I ++  +  D  + L+G K ++S+      +++A     +    
Sbjct: 122 LAIAMTEPGTGSDLAGIKTRAVEHEDH-WILNGSKTYISNGFLTDLVLVAAKTNPEASHE 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VG F V    E+G+P G    R   K+G  S  T EL F +     +   NV   P    
Sbjct: 181 VGLFWV----ENGTP-GFDRGRNLKKVGLESQDTAELFFDDV---KVPKANVLGDPRGGF 232

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           K ++      M+++  R  L  A+ +  R   +  I +D  + +RA            A+
Sbjct: 233 KTMM------MNLAEER--LIGAVGFVARAEHAFDITMDYIMERRAFG---------KAI 275

Query: 373 SFRLANSFDEAKSRSE-EAAYARI---------------MAPITKYWCCKMAPAVIAEAM 416
                + F  A  R+E +AA+A                 MA   K +  ++   V+ E +
Sbjct: 276 GTFQNSRFKMASCRTELDAAWALTDHCVREHMAGRLSAEMAAEAKLYTSEVEGRVVDECL 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG+GY++E  I+R YR++  + I  G+   M
Sbjct: 336 QLHGGAGYMDEYEISRLYRDARISRIYAGTSEIM 369


>gi|313888695|ref|ZP_07822359.1| butyryl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845253|gb|EFR32650.1| butyryl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 380

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 32/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
            GLTE   GTD     + GQ+ +   DG  Y L+G K F+++   +D FI++A  +   G
Sbjct: 123 FGLTEPGAGTD-----ASGQRTTAVLDGDEYVLNGSKIFITNAGFADVFIVIAMTDRSKG 177

Query: 255 CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +   ++E G+P G      ++K+G R ++T EL F +       LLG      G   
Sbjct: 178 NHGISAFIVERGTP-GFTVGEPEDKMGIRGSSTCELIFEDCRIPRENLLG--REGKGFAI 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            MK L   D   + ++   + +AE      + Y   R   G  +      +  +AD+   
Sbjct: 235 AMKTL---DGGRIGIASQALGIAEGAIDETVKYTTERKQFGRRISQFQNTQFELADMKTT 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +R A++          AA A++ A          A  +    ++  GG GY 
Sbjct: 292 AEAAQLLVYRAADAKQAGLPYGHFAAMAKLFA-------ANAASDITRRCLQLFGGYGYT 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
            +  I R  R++    I  G+   M + V
Sbjct: 345 RDYPIERMMRDAKITEIYEGTSEVMKMVV 373


>gi|312886279|ref|ZP_07745892.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301224|gb|EFQ78280.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 393

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFL 257
            GLTE   G++   +T+  +   D  Y L+G K W  ++P +D  ++ A+ EG ++   +
Sbjct: 137 FGLTEPDHGSNPGGLTTNFKDAGDH-YLLNGAKMWISNAPFADIAVVWAKNEGGKIQGLI 195

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +      G       NK   R++AT EL F N       LL +++   GP      
Sbjct: 196 VERGM-----GGFTTPETHNKWSLRASATGELVFDNVKVPKDNLLPNVSGLKGP------ 244

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+ A   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A
Sbjct: 245 LGCLNQARYGIAWGAIGCAMDCYDTALRYAKERVQFGKPIAGFQLQQKKLAEMITEITKA 304

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +RL     E ++ + + + A       K    + A  +  EA + +GG G   + S
Sbjct: 305 QLLVWRLGVLKSENRATAAQISMA-------KRNSVETAITIAREARQILGGMGITGDYS 357

Query: 430 IARH 433
           I RH
Sbjct: 358 IMRH 361


>gi|110641816|ref|YP_669546.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|170684026|ref|YP_001743559.1| putative acyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|191167836|ref|ZP_03029641.1| acyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|191171725|ref|ZP_03033272.1| acyl-CoA dehydrogenase [Escherichia coli F11]
 gi|193065248|ref|ZP_03046320.1| acyl-CoA dehydrogenase [Escherichia coli E22]
 gi|227885885|ref|ZP_04003690.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|300818332|ref|ZP_07098542.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           107-1]
 gi|300821432|ref|ZP_07101579.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           119-7]
 gi|300924730|ref|ZP_07140676.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           182-1]
 gi|300951287|ref|ZP_07165136.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           116-1]
 gi|300958576|ref|ZP_07170706.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           175-1]
 gi|300987755|ref|ZP_07178333.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           200-1]
 gi|301050974|ref|ZP_07197820.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           185-1]
 gi|301307301|ref|ZP_07213314.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           124-1]
 gi|309793463|ref|ZP_07687890.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           145-7]
 gi|110343408|gb|ABG69645.1| hypothetical protein YdiO (putative acyl-CoA dehydrogenase)
           [Escherichia coli 536]
 gi|170521744|gb|ACB19922.1| acyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|190902095|gb|EDV61839.1| acyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|190908055|gb|EDV67647.1| acyl-CoA dehydrogenase [Escherichia coli F11]
 gi|192927042|gb|EDV81664.1| acyl-CoA dehydrogenase [Escherichia coli E22]
 gi|227837458|gb|EEJ47924.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|294493538|gb|ADE92294.1| acyl-CoA dehydrogenase [Escherichia coli IHE3034]
 gi|300297351|gb|EFJ53736.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           185-1]
 gi|300306043|gb|EFJ60563.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           200-1]
 gi|300314785|gb|EFJ64569.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           175-1]
 gi|300419108|gb|EFK02419.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           182-1]
 gi|300449468|gb|EFK13088.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           116-1]
 gi|300525935|gb|EFK47004.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           119-7]
 gi|300528972|gb|EFK50034.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           107-1]
 gi|300837512|gb|EFK65272.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           124-1]
 gi|307553716|gb|ADN46491.1| putative acyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|308123050|gb|EFO60312.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           145-7]
 gi|315257502|gb|EFU37470.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           85-1]
 gi|315286379|gb|EFU45815.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           110-3]
 gi|315290542|gb|EFU49916.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           153-1]
 gi|320195410|gb|EFW70035.1| Acyl-CoA dehydrogenase [Escherichia coli WV_060327]
 gi|320197877|gb|EFW72485.1| Acyl-CoA dehydrogenase [Escherichia coli EC4100B]
 gi|323952202|gb|EGB48075.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|324007035|gb|EGB76254.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           57-2]
 gi|324011440|gb|EGB80659.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           60-1]
 gi|324016525|gb|EGB85744.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           117-3]
 gi|324119179|gb|EGC13067.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
          Length = 384

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|320668719|gb|EFX35524.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|108797162|ref|YP_637359.1| butyryl-CoA dehydrogenase [Mycobacterium sp. MCS]
 gi|119866247|ref|YP_936199.1| butyryl-CoA dehydrogenase [Mycobacterium sp. KMS]
 gi|108767581|gb|ABG06303.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. MCS]
 gi|119692336|gb|ABL89409.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. KMS]
          Length = 385

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + LTE  GG+D+  +T+       DG+       W  ++  S    +L + +        
Sbjct: 121 MALTEPGGGSDLQNMTTTALPCEGDGLAVNGSKTWISNARRSGLIALLCKTDPSA----T 176

Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
           PR       L+E G+  GL   R   K+G +   + EL F +        L G+     G
Sbjct: 177 PRHKGISVVLVEQGT-TGLSVSRDLPKLGYKGVESCELVFDDCRVPATAILGGEPG--RG 233

Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             + MK L    I + S  + V+    +L +A+ YA+ R   G  +     +   +AD+A
Sbjct: 234 FAQMMKGLETGRIQVASRALGVA--TAALEDALRYAQERESFGQPIWKHQSIGNYLADMA 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L+   A  +D  +    EA  A++ A        ++A  +   A+   GG G
Sbjct: 292 TKLTAARQLTRYAAERYDSGERADMEAGMAKLFA-------SEVAMEIALNAVRIHGGYG 344

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
           Y  E  + R++R++P   +++G G 
Sbjct: 345 YSTEYDVERYFRDAPL--MIVGEGT 367


>gi|73954562|ref|XP_536524.2| PREDICTED: similar to Acyl-CoA dehydrogenase family member 8,
           mitochondrial precursor (ACAD-8) (Isobutyryl-CoA
           dehydrogenase) (Activator-recruited cofactor 42 kDa
           component) (ARC42) [Canis familiaris]
          Length = 473

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 20/261 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G     + C 
Sbjct: 210 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRTGGPGPKGISCV 268

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL 315
           +V    E G+P GL + + + K+G  S  T  + F +    +   + N   G +  MK L
Sbjct: 269 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGNEGQGFIIAMKGL 323

Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               ++ A  S+     S+     Y   R   G  L +   ++  +AD+A  + A+  + 
Sbjct: 324 NGGRINVASCSLGAAHASVVLTRDYLSVRKQFGEPLANNQYLQFKLADMATRLVASRLII 383

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA----PAVIAEAMECIGGSGYIEERS 429
              A +  E   R +  A   +        C  M       +  +A++  GG GY+++ +
Sbjct: 384 RNAAVALQE--EREDAVALCSMAKLFATDECFAMRHYLWKKICNQALQMHGGYGYLKDYA 441

Query: 430 IARHYRESPANSILLGSGNAM 450
           + ++ R+S  + IL GS   M
Sbjct: 442 VQQYVRDSRVHQILEGSNEVM 462


>gi|260459689|ref|ZP_05807943.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034491|gb|EEW35748.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 388

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 26/260 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVG--CF 256
           LTE   G+D AA+ ++  K S G Y L+G K F+S    SD + ++ +   +G  G    
Sbjct: 133 LTEPGSGSDAAALKTRAVK-SGGDYILNGTKQFISGAGDSDVYAVMVRTGADGPKGISTI 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +VPR        GL +   ++K+G    +T ++ F +     +   N+ +G      I +
Sbjct: 192 IVPR-----DAPGLSFGANEHKMGWHMQSTRQVIFEDC---KVPAENLLSGEGAGFGIAM 243

Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD+  ++ AA 
Sbjct: 244 AGLDGGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              +  A+  D       +A  A   + + K +       V  +A++ +GG GY+ +  I
Sbjct: 304 IFLYAAASKLDR------KAPDAGKWSAMAKRFVTDTGFNVANDALQLLGGYGYLHDYGI 357

Query: 431 ARHYRESPANSILLGSGNAM 450
            +  R+   + IL G+   M
Sbjct: 358 EKLVRDLRVHQILEGTNEIM 377


>gi|258654336|ref|YP_003203492.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258557561|gb|ACV80503.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 15/261 (5%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           I   L+E+  G+D AA+ ++  +  D  + L+G K W  ++ +S  + ++A  +      
Sbjct: 127 ISYALSEREAGSDAAAMRTRAVRDGDD-WVLNGTKCWITNAGVSSWYTVMAVTDPDKRAK 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   +      G      + K+G + + T E+ F N    + GD  V          + 
Sbjct: 186 GISAFVVHADDPGFVVGSKERKLGIKGSPTREIHFENCR--IPGDRIVGEPGTGFATAMA 243

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD    ++    + LA+     AI Y + R   G  L +   ++  +AD+A+ I AA  
Sbjct: 244 TLDHTRPTIGAQAIGLAQGALDVAIGYIKERRQFGRHLAEFQGLQFMVADMAMQIDAART 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A + +         A    ++   K     +A  V  +A++ +GG+GY  +  + 
Sbjct: 304 LVYQAAAAAERGD------ANKTYLSAAAKCLASDVAMKVTVDAVQLLGGAGYTRDFPVE 357

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R  R++    I  G+     L
Sbjct: 358 RMMRDAKITQIYEGTNQVQRL 378


>gi|228966036|ref|ZP_04127103.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228793706|gb|EEM41242.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 390

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 35/242 (14%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 144 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 196

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 197 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 249 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 308

Query: 376 LANSFDEAKSR---SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +A  +DEA+ +    EE A         KY     A +++ ++M  +G     E+  + R
Sbjct: 309 IAKKYDEAEDKLSLQEELA-------AVKYAVTNAAISIVDKSMRIVGAKSLSEKNPLHR 361

Query: 433 HY 434
           +Y
Sbjct: 362 YY 363


>gi|126665860|ref|ZP_01736841.1| acyl-CoA dehydrogenase, putative [Marinobacter sp. ELB17]
 gi|126629794|gb|EBA00411.1| acyl-CoA dehydrogenase, putative [Marinobacter sp. ELB17]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             LTE   G+D A IT++ +K  D  + ++G K F+S      F ++  V G       P
Sbjct: 122 FALTEPGAGSDAAGITTRARKDGDS-FVINGSKHFISHAGEADFAIVFAVTGTDSSSGRP 180

Query: 260 R------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306
           R      L++ G+P G   +R    + NR     E+ F       S   G +    +V+ 
Sbjct: 181 RNQVTSFLVDKGTP-GFTVRRGPICVSNRGYHQYEIFFDDCRVHESKVLGEVGKGWDVAN 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +   ++++   +A       R  +      A R+     I  +Q V  + +AD+  +I
Sbjct: 240 SWLTAGRVMV---AAHCVGQAQRAQVLATQWAADRKQFGKAIGANQGVSFK-LADMVTEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  ++   A   DE      +A  A++ A        +M   V  EA++  GG G + 
Sbjct: 296 RAAELMTLHAAWKMDEGTMTDGDAGMAKLYAS-------EMLGRVTDEAVQIYGGMGLMN 348

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R +    I  G+
Sbjct: 349 ETVVERLWRNARIERIWEGT 368


>gi|237705641|ref|ZP_04536122.1| acyl-coA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|331677568|ref|ZP_08378243.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332279156|ref|ZP_08391569.1| acyl-coA dehydrogenase [Shigella sp. D9]
 gi|26108348|gb|AAN80550.1|AE016761_125 Hypothetical protein ydiO [Escherichia coli CFT073]
 gi|91072482|gb|ABE07363.1| hypothetical protein YdiO [Escherichia coli UTI89]
 gi|115512997|gb|ABJ01072.1| acyl-coA dehydrogenase [Escherichia coli APEC O1]
 gi|226900398|gb|EEH86657.1| acyl-coA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|331074028|gb|EGI45348.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332101508|gb|EGJ04854.1| acyl-coA dehydrogenase [Shigella sp. D9]
          Length = 401

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|333028414|ref|ZP_08456478.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332748266|gb|EGJ78707.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 27/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256
           L+E   G+D AA++ +  +   G + LSG K W     +SD   +LA+  G     V  +
Sbjct: 133 LSEPTAGSDAAALSMKAVR-DGGDWVLSGTKAWITHGGVSDFCTVLARSGGPGAKGVTAY 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           LVP         GL     + K+G + + T +L F    G  +GD        E   + L
Sbjct: 192 LVP-----ADAPGLSAAPPERKMGLKGSPTAQLHFD---GVRVGDERRIGAEGEGFSLAL 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+  + ++   V LA+A   A       R   G  + D   ++  +AD+A  + A  
Sbjct: 244 DALDAGRLGIAACAVGLAQAALDAALDWAAERRQFGRAIGDFQGLRFLLADMATAVEAGR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL    A   D     + +AA A+++       C   A  V  +A++  GG GY  +  +
Sbjct: 304 ALYLAAARRKDAGLPYARQAAMAKLL-------CTDNAMKVTTDAVQVFGGYGYTSDFPV 356

Query: 431 ARHYRESPANSILLGS 446
            R+ RE+    I+ G+
Sbjct: 357 ERYLREAKVLQIVEGT 372


>gi|301647878|ref|ZP_07247660.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           146-1]
 gi|301074019|gb|EFK88825.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           146-1]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|302560294|ref|ZP_07312636.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302477912|gb|EFL41005.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 385

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++  S+ + ++A 
Sbjct: 119 PLAKGDGMFSYCLSEPDAGSDAAGMKTRAVRDGDA-YVLNGVKRWITNAGESEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+   N       ++G+    
Sbjct: 178 TDPEKRSRGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEG-- 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y R R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVRERKQFGKPIADFQGIQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   ++          K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYAAA-----AKSERGDSDLT-FQGAAAKCFASDVAMEVTTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|53724487|ref|YP_104639.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67643473|ref|ZP_00442219.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|121601299|ref|YP_991477.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124383827|ref|YP_001027445.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126448360|ref|YP_001082411.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|167001218|ref|ZP_02267017.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|254175112|ref|ZP_04881773.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254201729|ref|ZP_04908093.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254207062|ref|ZP_04913413.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|254357543|ref|ZP_04973817.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52427910|gb|AAU48503.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121230109|gb|ABM52627.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124291847|gb|ABN01116.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126241230|gb|ABO04323.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147747623|gb|EDK54699.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147752604|gb|EDK59670.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|148026607|gb|EDK84692.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160696157|gb|EDP86127.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238524829|gb|EEP88260.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|243062939|gb|EES45125.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 623

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 131/334 (39%), Gaps = 58/334 (17%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A K+ +    P  KA   P+ +         TE + G+D+ A+ +    + DG+  ++G 
Sbjct: 139 ACKLLTLHGTPEQKALRGPLLRYDWDACFCATEPQAGSDMTAVRTVATPLGDGVCAVTGE 198

Query: 232 KWFLSSPMSD-AFIMLAQVEGRVG----------CFLVPRLLEDGSPNGL------CYQR 274
           K ++S+ M D     L  V GR+G          C +VPR   D +   L      C   
Sbjct: 199 KVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDDATGKLESNHVECVA- 257

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           L  K+G    A   L F     T   LLG+  NV       ++++  ++ A M      +
Sbjct: 258 LPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGL-----LQLVPLMNQARMGTGLFGI 312

Query: 331 SLA-----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
            +A     +++ YARRR     I            +++   ++R + D+   +     L 
Sbjct: 313 GVASSAYLQSVSYARRRVQGRPIDAASDTAAPRVRIVEHGDVQRMLVDMKARVEGCRGLL 372

Query: 374 FRLANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +L  +       EA   ++ A   R      ++ PI K +    A  V   A++  GG 
Sbjct: 373 GKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVCETAIQVHGGV 432

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   + ++ R+    SI  G+      D++ 
Sbjct: 433 GYTDASPVEQNARDVKILSIWEGTNYIQAQDLVR 466


>gi|301632496|ref|XP_002945321.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Xenopus
           (Silurana) tropicalis]
          Length = 551

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 27/298 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +    + ++  R   PT           + LG++E   G+D+A++ +  +K  D 
Sbjct: 256 MATPALTHFGSDELRERFLKPTVAGDQ-----VVCLGVSESGAGSDVASLKTTARKDGDD 310

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQV-EG---RVGCFLVPRLLEDGSPN-GLCYQRLKNK 278
            Y + G K W  +   +D   +LA   EG   R    +   L E G    G+  Q++K K
Sbjct: 311 -YVIDGSKMWITNGTQADWMCLLANTSEGDVHRNKSLICLPLRESGKLRPGISMQKIK-K 368

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
           +G  ++ T ++ F        + +G+     G    M+      L  A   V+ +   + 
Sbjct: 369 VGMWASDTAQVFFDEVRVPQRYRIGE--EGKGFTYQMRQFQEERLSGATRRVTALSHVID 426

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E I Y R+R   G  ++D  V+   +A++  ++    +L +R A         +E A+ A
Sbjct: 427 ETIAYTRQRKAFGRSILDNQVVHFRLAELKTEVEMLRSLIYRAAQVHMGGGDMTELASMA 486

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ A        ++   V    ++  GG G+  E  ++R +R+    SI  G+   M+
Sbjct: 487 KLKAG-------RLCREVTDSCLQYWGGMGFTWENKVSRAWRDLRLISIGGGADEIML 537


>gi|301027860|ref|ZP_07191161.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           196-1]
 gi|299879016|gb|EFI87227.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           196-1]
          Length = 373

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYN--FEMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|640350|pdb|3MDD|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640351|pdb|3MDD|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640352|pdb|3MDE|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640353|pdb|3MDE|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
          Length = 385

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 125 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV TG    
Sbjct: 184 FTGFIVEADTP-GVQIGRKEINMGQRC--------SDTRGIVFEDVRVPKENVLTGEGAG 234

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G +L +   +   +AD+A+ 
Sbjct: 235 FKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMK 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 295 VELARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAVQVFGGNGFN 347

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 348 TEYPVEKLMRDAKIYQIYEGT 368


>gi|148557129|ref|YP_001264711.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148502319|gb|ABQ70573.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 394

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           SM ++ ++  +H  +A   +  E    +  P       IG  GLTE   G+D   + +  
Sbjct: 99  SMASVQSSLVMHPIYA---YGSEEQKRHYLPGLAAGRLIGCFGLTEPDAGSDPGGMRTVA 155

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQR 274
           ++  DG Y L G K W  ++P +D F++ A+ E   G++  F++ + ++     GL   +
Sbjct: 156 RRDGDG-YVLHGSKTWISNAPFADVFVVWAKSEAHGGQIRGFILEKGMK-----GLSAPK 209

Query: 275 LKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+  R++ T  +   E       LL ++    GP         L+ A   +S   + 
Sbjct: 210 IEGKLSLRASTTGMILLDEVKVGADALLPNVEGLKGP------FGCLNRARYGISWGALG 263

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R   G  L    + ++ +A++  DI      S R+    DE +  
Sbjct: 264 AAEFCFHAARQYGLDRKQFGRPLAATQLYQKKLAEMMCDIGFGLQASLRVGRLMDEGR-- 321

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                +A  M  + K      A  +  +A +  GG+G  EE  + RH
Sbjct: 322 -----FAPEMVSMVKRNNVGKALDIARQARDMHGGNGISEEYQVIRH 363


>gi|145225035|ref|YP_001135713.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217521|gb|ABP46925.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 403

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++   K+    Y ++G K ++++      I+    L + +GR  +
Sbjct: 133 MAITEPGFGSDSAAVSTTA-KLDGDEYVINGEKIYVTAGSRATHIVVWASLDKSKGRAAI 191

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGP 308
             F+VPR        G+  +RL++K+G +++ T  + F N       LLG  D+NV  G 
Sbjct: 192 KSFIVPR-----EHPGVTVERLEHKLGIKASDTAAIRFDNVRIPRENLLGSPDINVEKGF 246

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIAD---- 361
              M+     D+    V+GM V +A  A+   R+     GI I  D+P   ++ A     
Sbjct: 247 AGVMET---FDNTRPVVAGMAVGVARAALEELRKILTDAGIEISYDKPAHAQSAAAAEFL 303

Query: 362 -IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  +   L+ R A   D     S+EA+  +  A        ++A  +  + +E  G
Sbjct: 304 RMEADWESGYLLTLRSAWQADNRIPNSKEASMGKAKA-------ARVASDITLKTVELAG 356

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +GY E+  + +  R+S    I  G+
Sbjct: 357 TTGYSEQALLEKWARDSKILDIFEGT 382


>gi|149925586|ref|ZP_01913850.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105]
 gi|149825703|gb|EDM84911.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105]
          Length = 393

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 122/290 (42%), Gaps = 31/290 (10%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYC 227
           R   DW  K F          P   +   IG L ++E   G+D+ ++  +  K  D  Y 
Sbjct: 106 RNGTDWQRKTF---------LPKLISGEHIGALAMSEPGAGSDVVSMQLRADKKGDK-YV 155

Query: 228 LSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L+G+K W  + P +D  ++ A+ +   G   +   L + +  G    +  +K+G R + T
Sbjct: 156 LNGNKMWITNGPDADVLVVYAKTDLAAGPHGITAFLIEKNFKGFSIAQKLDKLGMRGSHT 215

Query: 287 VELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAI 336
            EL F       ++  G +   +NV    ++        + A++S   +  M  ++   +
Sbjct: 216 GELVFEDCEVPETHVLGKVGRGVNVLMSGLD-------FERAVLSGGPLGIMAAAMDVVV 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  + +  +++  +AD+   + A  A  +++  + D+A   +         
Sbjct: 269 PYVHDRKQFGQSIGEFQLIQGKLADMYSTMMATRAYVYQVGKACDKATPETVRKLRKDCA 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             I   +  + A  +  E+++ +GG+GYI E    R +R++    I  G+
Sbjct: 329 GAI--LYSAEKATWMAGESIQILGGNGYINEYPCGRLWRDAKLYEIGAGT 376


>gi|33599553|ref|NP_887113.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567149|emb|CAE31063.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 17/199 (8%)

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
           + G FLVP     G+P      +L +K+G R+  T EL F++        L G       
Sbjct: 184 KSGLFLVPH----GTPGFTVGSKL-HKMGMRAADTRELFFTDCRIPAAHILNGGAAGQAS 238

Query: 308 PVE-DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           P + D +    L  A  ++   R  L +AI +A++R   G  L ++ +++  IA++  DI
Sbjct: 239 PFKSDTQYHSKLFLASNAIGLQRYCLDQAIDFAKQRKTWGVPLSERQLIQGWIAEMVADI 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +T L  R A  ++     + ++A       I KY   + A      A E  GG GY++
Sbjct: 299 QISTLLRDRAAVLYEAGTLSAADSA-------ILKYVSAENAVKASHYASEIFGGMGYMD 351

Query: 427 ERSIARHYRESPANSILLG 445
              ++R YR++   +I+ G
Sbjct: 352 GVGVSRRYRDAKGLTIIQG 370


>gi|326383153|ref|ZP_08204842.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198289|gb|EGD55474.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 44/280 (15%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE- 250
           K +V   L  TE   G+D A+I +   K+ DG Y ++G K W  ++  +  +++ A+ + 
Sbjct: 124 KDAVMTALATTEPGSGSDAASIITSATKV-DGGYRINGQKAWISNAGAAQQYVVFAKTDK 182

Query: 251 ----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----------- 295
               G V  F+  +        G+ +     K+G R+    E+ F + F           
Sbjct: 183 TKRSGGVTAFMFTK-----DTPGVSFGEPMKKMGQRAIVCREVFFDDMFVPDEDRLGEEG 237

Query: 296 -GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
            GF  L+G  ++S            +     +V   R +   A++YAR R   G  +I+ 
Sbjct: 238 QGFYGLMGTFDISR-----------VVLGAAAVGAARAAYEYALNYARERKQFGVPIIEH 286

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +A++A  I +A  L    A   D  +  +  AA  ++ A  T  +       V 
Sbjct: 287 QAVAFRLAEMATRIESARLLVHHAARVIDSGQRATGIAAMCKLQASETAMF-------VT 339

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             A++ +GG GY  E  + +  R+     I  G+ + M L
Sbjct: 340 HAAVQTLGGWGYSREFPVEQWMRDVKLEEIEEGTSDIMKL 379


>gi|126434107|ref|YP_001069798.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233907|gb|ABN97307.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 633

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 55/295 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGR-------- 252
           LTE   G+D+ A  ++     DG + + G K F+++   D A  +L  V  R        
Sbjct: 164 LTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVG 223

Query: 253 ------VGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296
                 +  FLVP+   D       G  NG+    ++ K+G   + T EL   +     G
Sbjct: 224 GPGTKGLSLFLVPKFHFDPDTGELTGERNGVYANNVEKKMGMNVSTTCELTLGDDAPARG 283

Query: 297 FLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID- 351
           +LLG+++         +ED ++++       +++ +      A+ YA++R V G  L   
Sbjct: 284 WLLGEVHDGIAQMFEVIEDARMMV----GCKAIATLSSGYLNALDYAKQR-VQGADLAQM 338

Query: 352 ------------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS---EEAAYAR-- 394
                        P ++R++           +L    A+  DE   ++   E+ A A   
Sbjct: 339 SDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAVKTAAGEDTALAEAV 398

Query: 395 --IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             ++ PI K +  + +  V+  E+++  GGSGY+ E  I ++ R++  +++  G+
Sbjct: 399 NDLLLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGT 453


>gi|307293083|ref|ZP_07572929.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881149|gb|EFN12365.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 560

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 132/346 (38%), Gaps = 69/346 (19%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T      W P+I +    PT                TE   G
Sbjct: 253 GSLATRSEIAAELILTGGTDEQKAHWLPQIANASILPTAV-------------FTEPDTG 299

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ ++ ++   ++DG Y +SG+K W   +  +D   +L + +                P
Sbjct: 300 SDLGSLRTRA-TLADGEYRVSGNKTWITHAARADVMTLLVRTD----------------P 342

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--------------------- 306
           +   Y  L   I  +   TVE  F  T G   G++ V                       
Sbjct: 343 DTKNYSGLSMLIAPKQRGTVEAPFP-TPGMSGGEIEVIGYRGMKEYEIGFDDFRVPAANL 401

Query: 307 -GPVEDM---KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357
            G VE     +++   +SA +  +   + +A+A     + YA  R   G  + D P +  
Sbjct: 402 LGGVEGQGFKQLMATFESARIQTAARAIGVAQASLDIGLAYALDRKQFGRPIFDFPRVAN 461

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +A +I  A  L++  A   DE K    EA  A+++         ++A A    A++
Sbjct: 462 KLAMMAAEIMGARQLTYFAARRKDEGKRCDLEAGMAKLIG-------ARVAWAAADNALQ 514

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+G+  E  ++R   ++   +I  G+G      +   L  G N
Sbjct: 515 IHGGNGFATEYQVSRLLADARILNIFEGAGEIQAQVIARRLLDGGN 560


>gi|83858217|ref|ZP_00951739.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83853040|gb|EAP90892.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 378

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A + ++  +  D  Y L+G K F+S +  SD + ++ +  G  G   +  
Sbjct: 124 LTEPGAGSDAANLRTKAVRDGDH-YVLNGSKAFISGAGTSDLYAVMCRT-GEDGPKGIST 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306
           ++ +    GL +   + K+G  S  T  + F +               FGF +  LN   
Sbjct: 182 IIVEKDTPGLSFGANERKMGWNSQPTRVVTFEDCRVPVENRIGEEGQGFGFAMQGLNGGR 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      ++    S+ G   ++  A  YA+ R   G  + D    +  +AD+  ++
Sbjct: 242 -----------INIGACSLGGAAEAVDLATQYAKERSQFGRNIADFQATQFKLADMVTEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+  +  R A+S D           A +   + K +   M   +  +A++  GG GY++
Sbjct: 291 DASRMMLLRAADSVDRKDPS------AAMHCAMAKRFATDMGFKIANDALQIHGGYGYLK 344

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           +  + R  R+   + IL G+   M
Sbjct: 345 DYPLERIVRDLRVHQILEGTNEIM 368


>gi|161984945|ref|YP_407885.2| acyl-CoA dehydrogenase [Shigella boydii Sb227]
 gi|187733125|ref|YP_001880455.1| putative acyl-CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|187430117|gb|ACD09391.1| acyl-CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|320184444|gb|EFW59252.1| Acyl-CoA dehydrogenase [Shigella flexneri CDC 796-83]
 gi|332096027|gb|EGJ01032.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           3594-74]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|325123576|gb|ADY83099.1| acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 390

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 131/328 (39%), Gaps = 40/328 (12%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--------KDWAPKIFSREYDPTNKAP 190
           RLY M  +E       S T  S+ + +    V+        + W PK+ + E        
Sbjct: 79  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYVNNFGNEEQKQKWLPKMATGE-------- 130

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248
                V   + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  +++ +
Sbjct: 131 -----VVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVINGSKIFITNGYLCDMAVVVCK 183

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                 G   +  ++ + +  G    +  NKIG +   T EL F N       LLG    
Sbjct: 184 TGNSDKGSANLSLIIVEANRAGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG--ME 241

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  MK L +  +  AI+  +G   + A  + Y + R   G  +      +  +A++
Sbjct: 242 GMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGAFQNTRFKLAEL 301

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I        R      E K   E AA A       KY    M   ++ E ++  GG 
Sbjct: 302 RTEIDFCRTYLDRCMELQLEEKLSVEAAAAA-------KYKISDMFSKIVDECLQLHGGY 354

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR Y +  AN I  G+   M
Sbjct: 355 GYMLEYPIARAYIDHRANRIYAGTNEIM 382


>gi|313903824|ref|ZP_07837213.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466012|gb|EFR61537.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 402

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 50/289 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
           ++ +   +TE   GT+   + ++ +K   G+Y L G K W   + ++D  +++A    R 
Sbjct: 125 TLKLAFAITEPESGTNSFRMKTEARK-EGGVYRLRGEKGWITGADVADMILVVA----RT 179

Query: 254 GCFLVPRLLEDGSPN----GL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             + V  L E G P     GL    R    +      T  +E    F  +  D+ V    
Sbjct: 180 IPYAV--LKEQGLPRTYGLGLFLVDRRAPGLHLYPMNTAGIEGYRQFRLVFDDVEVPADH 237

Query: 309 V---EDMKILIY---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV--- 354
           +   E M   +    L+   +  +   V LAE     A  YAR+R V G    D+P+   
Sbjct: 238 LIGAEHMGAQVLFSALNPERILAAATGVGLAEHVLRRAAEYARQRKVFG----DRPIGSY 293

Query: 355 --MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A I +   AA  L++R A +FD   S      +A +     KY   + A   +
Sbjct: 294 QAVQHPLARIRVMQEAARLLTYRAAQAFDRQVSPERVGTWANM----AKYLASETAIEAV 349

Query: 413 AEAMECIGGSGYIEERSI------ARHYRESPANSILLGSGNAMVLDVL 455
             A++  GG G++ E  +      AR  R +P N       N MVL+ +
Sbjct: 350 DRAIQTFGGQGFVRENQLIHLWTSARLLRTAPIN-------NEMVLNFI 391


>gi|218780505|ref|YP_002431823.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761889|gb|ACL04355.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 390

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 37/300 (12%)

Query: 165 MTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           M TP +++      F  EY   T   P     +   + +TE   G+D++A+ +  +K  D
Sbjct: 104 MATPAIYE------FGSEYLKETYLVPAIAGDMVTSIAVTEPGAGSDVSALATTAKKDGD 157

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKN 277
             Y ++G K ++++   +D   +LA+     G      F+VP  L      G    +  +
Sbjct: 158 H-YVINGSKTYITNGTQADYLTLLARTSDDPGYHSFSLFVVPTNLP-----GFQVSKKLD 211

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G RS+ T EL F +       L+G      G +  M+   +      ++ G  +   +
Sbjct: 212 KLGMRSSDTAELFFDDVRIPKENLIG--REGEGFIYQMQ--QFQHERFSAIPGGYIVAKD 267

Query: 335 AI----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            I     Y + R V G  LI + +++  +A    +I    +L++ +          + E 
Sbjct: 268 IIDLTLDYIKGRVVFGKPLIKRELLQHRLAQWLTEIECLKSLTYHIVQMKMAGLECTREI 327

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  ++ A        K+   V A+ ++  GG G++ E  I R YR++   S+  G+   M
Sbjct: 328 SMGKLKA-------AKVLQGVAADCIQMFGGMGFMNEALITRFYRDARIISVGGGADEVM 380


>gi|38704005|ref|NP_310429.2| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. Sakai]
 gi|89108535|ref|AP_002315.1| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. W3110]
 gi|90111318|ref|NP_416210.4| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157154739|ref|YP_001462989.1| putative acyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|157161159|ref|YP_001458477.1| putative acyl-CoA dehydrogenase [Escherichia coli HS]
 gi|161367598|ref|NP_288129.2| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|161486218|ref|NP_753985.2| putative acyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|162138434|ref|YP_540894.2| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|162317576|ref|YP_852786.2| putative acyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|168751894|ref|ZP_02776916.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4113]
 gi|168756693|ref|ZP_02781700.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4401]
 gi|168762244|ref|ZP_02787251.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4501]
 gi|168770453|ref|ZP_02795460.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4486]
 gi|168775008|ref|ZP_02800015.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4196]
 gi|168782107|ref|ZP_02807114.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4076]
 gi|168789829|ref|ZP_02814836.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC869]
 gi|168800127|ref|ZP_02825134.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC508]
 gi|170019955|ref|YP_001724909.1| putative acyl-CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|170081354|ref|YP_001730674.1| acyl-CoA dehydrogenase [Escherichia coli str. K-12 substr. DH10B]
 gi|193069000|ref|ZP_03049959.1| acyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194429515|ref|ZP_03062037.1| acyl-CoA dehydrogenase [Escherichia coli B171]
 gi|195937379|ref|ZP_03082761.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208810378|ref|ZP_03252254.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4206]
 gi|208816948|ref|ZP_03258068.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4045]
 gi|208819134|ref|ZP_03259454.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4042]
 gi|209396182|ref|YP_002270764.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4115]
 gi|209919009|ref|YP_002293093.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215486870|ref|YP_002329301.1| putative acyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217329038|ref|ZP_03445119.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. TW14588]
 gi|218554262|ref|YP_002387175.1| putative acyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|218558564|ref|YP_002391477.1| acyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218689639|ref|YP_002397851.1| putative acyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218695256|ref|YP_002402923.1| putative acyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218705193|ref|YP_002412712.1| putative acyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|238900910|ref|YP_002926706.1| putative acyl-CoA dehydrogenase [Escherichia coli BW2952]
 gi|254793312|ref|YP_003078149.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018111|ref|ZP_05431976.1| putative acyl-CoA dehydrogenase [Shigella sp. D9]
 gi|256022642|ref|ZP_05436507.1| putative acyl-CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|260844001|ref|YP_003221779.1| putative acyl-CoA dehydrogenase [Escherichia coli O103:H2 str.
           12009]
 gi|261227860|ref|ZP_05942141.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258406|ref|ZP_05950939.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282825|ref|YP_003499643.1| acyl-coA dehydrogenase [Escherichia coli O55:H7 str. CB9615]
 gi|293415010|ref|ZP_06657653.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|293446069|ref|ZP_06662491.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|298380836|ref|ZP_06990435.1| acyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300898524|ref|ZP_07116857.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           198-1]
 gi|306815052|ref|ZP_07449208.1| putative acyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|307310734|ref|ZP_07590380.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|312966848|ref|ZP_07781066.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312969723|ref|ZP_07783906.1| putative acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|331668381|ref|ZP_08369229.1| putative acyl-CoA dehydrogenase [Escherichia coli TA271]
 gi|71164832|sp|P0A9V0|YDIO_ECO57 RecName: Full=Uncharacterized protein YdiO
 gi|71164833|sp|P0A9U9|YDIO_ECOL6 RecName: Full=Uncharacterized protein YdiO
 gi|71164834|sp|P0A9U8|YDIO_ECOLI RecName: Full=Uncharacterized protein YdiO
 gi|85675081|dbj|BAA15464.2| predicted acyl-CoA dehydrogenase [Escherichia coli str. K12 substr.
           W3110]
 gi|87081958|gb|AAC74765.2| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157066839|gb|ABV06094.1| acyl-CoA dehydrogenase [Escherichia coli HS]
 gi|157076769|gb|ABV16477.1| acyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|169754883|gb|ACA77582.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|169889189|gb|ACB02896.1| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. DH10B]
 gi|187769509|gb|EDU33353.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4196]
 gi|188014143|gb|EDU52265.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4113]
 gi|189000281|gb|EDU69267.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4076]
 gi|189356154|gb|EDU74573.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4401]
 gi|189360636|gb|EDU79055.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4486]
 gi|189367501|gb|EDU85917.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4501]
 gi|189370613|gb|EDU89029.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC869]
 gi|189377542|gb|EDU95958.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC508]
 gi|192957795|gb|EDV88239.1| acyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194412479|gb|EDX28779.1| acyl-CoA dehydrogenase [Escherichia coli B171]
 gi|208724894|gb|EDZ74601.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4206]
 gi|208731291|gb|EDZ79980.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4045]
 gi|208739257|gb|EDZ86939.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4042]
 gi|209157582|gb|ACI35015.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4115]
 gi|209912268|dbj|BAG77342.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215264942|emb|CAS09328.1| predicted acyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217318385|gb|EEC26812.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. TW14588]
 gi|218351988|emb|CAU97720.1| putative acyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218361030|emb|CAQ98605.1| putative acyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|218365333|emb|CAR03054.1| putative acyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218427203|emb|CAR08089.2| putative acyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218432290|emb|CAR13180.1| putative acyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|222033451|emb|CAP76192.1| Uncharacterized protein ydiO [Escherichia coli LF82]
 gi|238862119|gb|ACR64117.1| predicted acyl-CoA dehydrogenase [Escherichia coli BW2952]
 gi|254592712|gb|ACT72073.1| predicted acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257759148|dbj|BAI30645.1| predicted acyl-CoA dehydrogenase [Escherichia coli O103:H2 str.
           12009]
 gi|260449182|gb|ACX39604.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|281178765|dbj|BAI55095.1| putative acyl-CoA dehydrogenase [Escherichia coli SE15]
 gi|290762698|gb|ADD56659.1| Acyl-coA dehydrogenase [Escherichia coli O55:H7 str. CB9615]
 gi|291322899|gb|EFE62327.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|291432658|gb|EFF05637.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|298278278|gb|EFI19792.1| acyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300357788|gb|EFJ73658.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           198-1]
 gi|305851700|gb|EFM52153.1| putative acyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|306908912|gb|EFN39408.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|307626818|gb|ADN71122.1| putative acyl-CoA dehydrogenase [Escherichia coli UM146]
 gi|309701920|emb|CBJ01232.1| Putative acyl-CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310338008|gb|EFQ03097.1| putative acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|312288312|gb|EFR16214.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312946295|gb|ADR27122.1| putative acyl-CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315061000|gb|ADT75327.1| predicted acyl-CoA dehydrogenase [Escherichia coli W]
 gi|315136336|dbj|BAJ43495.1| putative acyl-CoA dehydrogenase [Escherichia coli DH1]
 gi|320188381|gb|EFW63043.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC1212]
 gi|320641910|gb|EFX11278.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647366|gb|EFX16174.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H- str.
           493-89]
 gi|320652660|gb|EFX20929.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H- str. H
           2687]
 gi|320653045|gb|EFX21241.1| putative acyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658729|gb|EFX26406.1| putative acyl-CoA dehydrogenase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|323186159|gb|EFZ71514.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1357]
 gi|323187119|gb|EFZ72435.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           RN587/1]
 gi|323378428|gb|ADX50696.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
 gi|323937298|gb|EGB33577.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
 gi|323940638|gb|EGB36829.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323948114|gb|EGB44105.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
 gi|323956596|gb|EGB52334.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
 gi|326342060|gb|EGD65841.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. 1044]
 gi|331063575|gb|EGI35486.1| putative acyl-CoA dehydrogenase [Escherichia coli TA271]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|307138354|ref|ZP_07497710.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|315618891|gb|EFU99474.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           3431]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|301059305|ref|ZP_07200232.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300446534|gb|EFK10372.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 401

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 35/280 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG------ 254
            TE   G+D+  + +  ++ +DG + L+G K F ++   +D FI+LAQ +   G      
Sbjct: 125 FTEPDHGSDLTRMETTLEEEADG-FVLNGTKIFTTNGKYADFFIVLAQEDPNAGPGKGMS 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--- 311
             LV R         +    +  K+G R  ++ E+ F         DL +   P E+   
Sbjct: 184 TILVERDSNSWLGGNMEINEITGKMGLRMTSSSEVVFH--------DLKI---PRENILG 232

Query: 312 ------MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                 M +L +LD + + +    +   E     A+ +AR R      +ID   +   +A
Sbjct: 233 ERGRGLMNVLEFLDESRIEIGAQALGNCEGAFLKALAHARERKQFNRPIIDFQGVGHKLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +   I +   L++  A   D+  +R   +    ++  + K+   + A A+I +A+   G
Sbjct: 293 RMWSRIQSLKWLNYYGAWLCDKGPARLSRSI--PLITSVVKHHVPETAKAIIDDAITVFG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY  ++ + R YR++    +  G+    + +++ +L K
Sbjct: 351 GYGYFLDQEVERRYRDNRIVEVYEGTVEVQLNNIVRVLGK 390


>gi|302541639|ref|ZP_07293981.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459257|gb|EFL22350.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 400

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 27/264 (10%)

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-----AQVEG-----RVGCF 256
           G+D++AITS+   + DG  Y L+G K +L++  +   + +      Q EG      +  F
Sbjct: 135 GSDVSAITSKA--VPDGDEYMLNGQKMWLTNGGTSTLVAVLCRTGDQQEGVPPHKSMTTF 192

Query: 257 LVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVED 311
           LV +    G    GL       K+G +   T EL            L G  N     + D
Sbjct: 193 LVEKEPGFGEVRPGLTIPGKIEKMGYKGVDTTELIMDGLRIPADRVLGGTTNRGFYQMMD 252

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              +  ++ A       + +    + YA++RH  G  +     ++  +A++   + AA A
Sbjct: 253 GVEVGRVNVAARGCGVAQRAFELGVAYAQQRHTFGKPIAQHQAIQFKLAEMGTKVEAAHA 312

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A   D       EA  A       KY   +    V+ +A    GG G+ +E  I 
Sbjct: 313 MMVNAARKKDAGARNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEYEIE 365

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YRE+P   +L+G G A +  ++
Sbjct: 366 RLYREAPM--LLIGEGTAEIQKMI 387


>gi|240281703|gb|EER45206.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 345

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 43/278 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 69  ICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMN 128

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            +  LL + S  G+  +++  + G  ++ T  + F         D+ V   PVE++    
Sbjct: 129 GISVLLIERSAGGVGTRKMDCQ-GMATSGTTYVTFE--------DVKV---PVENLIGKE 176

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +
Sbjct: 177 NQGFKVIMMNFNHERMGIIIQCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHM 236

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIA 413
           A  I A+      L N   + +S  +  A  R+   I         T  +C + A  +  
Sbjct: 237 ARQIEASHNW---LENLVFQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFG 293

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 GG G      I R YR+  A +I  GS   M+
Sbjct: 294 GLSYTRGGQG----GKIERLYRDVRAYAIPGGSEEIML 327


>gi|183984709|ref|YP_001853000.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium marinum M]
 gi|183178035|gb|ACC43145.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium marinum M]
          Length = 388

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 50/270 (18%)

Query: 195 SVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           SVA G      G+TE   G D + IT+  ++  D  Y ++G K W   +  SD  ++L  
Sbjct: 114 SVATGETHVCFGVTEPGAGLDTSRITTFAKRDGD-RYVVNGRKVWISKAVESDKILLLT- 171

Query: 249 VEGRVGCFLVPRLLEDGSP---NGLCYQRLK----NKIGNRSNATVEL------------ 289
              R   +   +   DG       L   R++     K+G  + ++ EL            
Sbjct: 172 ---RTQSYDEVKKKTDGMTLFITDLDRSRVEVRPIRKMGRNAVSSNELFIDNLEIPVEDR 228

Query: 290 --EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
             E  N F ++L  LN         ++LI    A  ++   RV+L +A+ Y   R V G 
Sbjct: 229 IGEEGNGFQYILDGLNPE-------RMLI----AAEALGIGRVALDKAVKYGNEREVFGR 277

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     ++  +AD    + AA  +  +    +D  K    EA  A       KY C   
Sbjct: 278 PIGMNQGLQFPLADSLARLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADA 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRES 437
             A    A++  GG GY EE  +AR++RE+
Sbjct: 331 GFAAADRALQTHGGMGYAEEYHVARYFREA 360


>gi|254819087|ref|ZP_05224088.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 460

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 56/329 (17%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S +    +P    +WAP+ F    D      ++  ++AI    +E  GG+D+  + ++ +
Sbjct: 96  SAIGQAASPEQMLEWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTRAR 145

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
           +  D  + + GHK W  +  +++  ++ A V+  +G      F+VP     G+P GL   
Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVP----GGTP-GLKLL 199

Query: 274 RLKNKIGNRSNATVELEFSNTF---GFLLGDL---------------------NVSTGPV 309
           R  +K+G R++ T EL F         LLG                       + + G  
Sbjct: 200 RKLDKLGCRASHTAELLFEGVRVPRANLLGGEEKLEHKLAKAREVVAGGKRSGSATLGTF 259

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  + ++    A  ++   R +L  A  YA  R   G  +ID   +   +A++A  I AA
Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATAYATEREAFGAPIIDNQGIAFPLAELATQIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++R   S+  A +      + R    ++K    ++A      A++ +GG GYI +  
Sbjct: 316 RLLTWR--ASWMAANN----VPFERGEGSMSKMAASEVAVKATERAIQTMGGWGYITDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + + YR++   +I  G+     + + N L
Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVISNAL 398


>gi|163745795|ref|ZP_02153154.1| glutaryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161380540|gb|EDQ04950.1| glutaryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 407

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  K ++G Y L+G K W  +SP++D F++ A+ E    ++  
Sbjct: 149 FGLTEPDAGSDPAGMKTRAVKTANG-YKLTGSKMWISNSPIADVFVVWAKSEEHDNKIRG 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++ NK+  R++ T E+           LL ++    GP    
Sbjct: 208 FVLEKGMK-----GLSAPKIGNKLSLRASITGEIVMDGVEVGEDALLPNVQGLKGP---- 258

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   +S   +  AE   +A R++       ++P     + ++ +AD+  +I+
Sbjct: 259 --FGCLNRARYGISWGAMGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKKLADMMTEIS 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                S ++    D A +  E       M  I K   C  A  V   + +  GG+G   E
Sbjct: 317 LGLQGSLQVGRLMDAANAAPE-------MISIVKRNNCGKALDVARMSRDMHGGNGISGE 369

Query: 428 RSIARH 433
             + RH
Sbjct: 370 FQVIRH 375


>gi|118618093|ref|YP_906425.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium ulcerans Agy99]
 gi|118570203|gb|ABL04954.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium ulcerans Agy99]
          Length = 389

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  A+ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAGAMRTRAKADGDD-WILNGTKCWITNGGKSSWYTVMAVTDPENGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FVVHKDDEGFVVGPKERKLGIKGSPTTELYFENC--RVPGDRMIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKDRKQFGKSISDFQAVQFMLADMAMKVESARLMVYS 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E+    I A  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AA-----ARAERGESNLGFISAA-SKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|300930835|ref|ZP_07146205.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           187-1]
 gi|300461310|gb|EFK24803.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           187-1]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|150017731|ref|YP_001309985.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904196|gb|ABR35029.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 24/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A   +   + DG  Y L+G K F+++   +D +I+ A  +   G   
Sbjct: 123 FGLTEPVAGTD--ASMQKTTAVLDGDNYILNGSKIFITNAGYADTYIVFAMTDKSKGTKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G      + K+G R+++T EL F N       LLG+     G       
Sbjct: 181 ISAFIVEKDFPGFSVGSHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIA----- 235

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++   + +AE      + Y + R   G  +      +  +A +  +  AA
Sbjct: 236 MATLDGGRIGIAAQALGIAEGAIEETVKYVKERVQFGKSIAQFQNTQFELAQMRANTEAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A + D+ +  +  AA A++ A        + A  V    ++  GG GY  +  
Sbjct: 296 KLLVYQAACAKDDHQKFTHLAAMAKLFA-------ARNATDVTNRCLQLFGGYGYTSDYP 348

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           I R  R++    I  G+    ++
Sbjct: 349 IERMMRDAKITEIYEGTSEVQMM 371


>gi|332286746|ref|YP_004418657.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
 gi|330430699|gb|AEC22033.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
          Length = 395

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 21/255 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA++       D  Y L+G K W  +  ++D + +  +     G   +
Sbjct: 133 FALSEPDAGSDVAALSCSATPDGDD-YVLNGRKTWISNGGIADFYCVFVRTGEAPGARGI 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
              + D    GL        +     AT+  +      S   G       ++      M 
Sbjct: 192 SAFVVDADTPGLTIAERIEVMAPHPLATLSFDQCRVSASQRLGQAGQGFKIAM-----MT 246

Query: 314 ILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + I+  S   +  G  R +L EA+  A  R + G  L D  + + A+ D+A +I AA  L
Sbjct: 247 LDIFRSSVAAAALGFARHALDEALSRATSRRMFGQALADLQLTQAALGDMACEIDAAALL 306

Query: 373 SFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++R A   D    R + EAA A++ A        + A  +I  A++  GG+G +    + 
Sbjct: 307 TYRAAWLRDVKGVRTTREAAMAKMAA-------TESAQRIIDRALQMFGGAGVVSGAPVE 359

Query: 432 RHYRESPANSILLGS 446
           + YRE  A  I  G+
Sbjct: 360 KLYREIRALRIYEGA 374


>gi|317472252|ref|ZP_07931580.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316900209|gb|EFV22195.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 30/259 (11%)

Query: 202 LTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGRV 253
           LTE   G+D AA+ T+       G Y L+G K F+S      ++++         V+G +
Sbjct: 124 LTEPNAGSDAAAVRTTAVLDEETGEYVLNGTKCFISGGGQAKYLLIFALTDPSKGVKG-L 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            C LV    E G+P G    +++NK+G   + T EL F       +   N+        K
Sbjct: 183 SCILV----EKGTP-GFTVGKIENKMGIHGSETAELIFDQC---RVPKENLVGKEGAGFK 234

Query: 314 ILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           + +  LD A + V+   + +AE       ++++  +   +P+     ++  IAD+A    
Sbjct: 235 MAMNALDGARIGVAAQALGIAEGALDESVKYMNERVQFGKPIKALQGLQWYIADMATKTE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  + +  A      +  ++EAA A++ A     +   +A       ++  GG GY+++
Sbjct: 295 CAKWMIYYAAYLKSTGQPHTKEAAIAKLNASENARFVTNLA-------LQIHGGYGYMKD 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R YR++    I  G+
Sbjct: 348 YPLERMYRDAKITEIYEGT 366


>gi|228986174|ref|ZP_04146316.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228773555|gb|EEM21979.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 31/240 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG++     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGER-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315
              +  G+  +   + +  R  A+ +L     E  N F       +V  G V+   I  L
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIDNRFF-----TDVKGGKVKQKGIGWL 240

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    ++
Sbjct: 241 LHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 300

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A  +DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 301 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAVSIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|90411318|ref|ZP_01219330.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
 gi|90327847|gb|EAS44178.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
          Length = 389

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 24/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +   D  Y L+G K W  + P +   ++ A+ +       +
Sbjct: 130 LAMSEPNAGSDVISMQLKAELEGDH-YVLNGTKMWITNGPDAHTIVVYAKTDPSAKSHGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G  + +  +K+G R + T EL F N       +LG +N     VE +   
Sbjct: 189 TAFIIERDFKGFSHAQKLDKLGMRGSNTCELVFENCRVPQENILGKVNHG---VEILMSG 245

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +  +++      M+  L   + Y   R   G  + +  +++  +AD+   + AA A 
Sbjct: 246 LDYERVVLAAGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKVADMYTRMNAARAY 305

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  ++A  +  + ++ +GG+GYI E S  R
Sbjct: 306 VYTVAAACDRGETTRKDAAGVIL-------YSAELATQLALDTIQLLGGNGYINEFSAGR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             R++    I  G+G + +  +L     G  LFE+
Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|312129973|ref|YP_003997313.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906519|gb|ADQ16960.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 452

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 54/299 (18%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITS 216
           S   + L  +    ++W PK             M +       GLTE   G+  A  +T+
Sbjct: 165 SMGSIYLCGSEEQKQEWLPK-------------MNRMEKIGAFGLTEPEVGSGAAGGLTT 211

Query: 217 QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQ 273
             ++ +DG + L+G K W  ++  +D  I+ A+    G V  FLV +        G+  +
Sbjct: 212 TCKQTADG-WVLNGQKKWIGNATFADVIIIWARDVDSGEVKGFLVRK-----ENPGVHVE 265

Query: 274 RLKNKIGNR---------SNATVE----LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           ++K K+  R          +  VE    L  +N+F      L ++   V           
Sbjct: 266 KIKGKMALRIVQNGLITLKDCIVEEKDRLPHANSFKDTANVLRMTRAGV----------- 314

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A M+V   R +   A+ Y + R   G  +    +++  + ++  ++ A   L +RL+   
Sbjct: 315 AWMAVGCARGAYENALEYTKTRKQFGKPIASFQLIQNHLVEMISNLTAMQTLVYRLSELQ 374

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           DE K + E A+ A++       +C      ++  A E +GG+G + + ++AR   ++ A
Sbjct: 375 DEDKLKDEHASLAKV-------FCTLRTRDIVRGAREVMGGNGILLDYNVARFVADAEA 426


>gi|148872486|sp|P41367|ACADM_PIG RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|56791886|gb|AAW30430.1| medium-chain acyl-coA dehydrogenase [Sus scrofa]
          Length = 421

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV TG     KI +
Sbjct: 219 FTGFIVEADTP-GVQIGRKEINMGQRCSDTRGIVFEDV---RVPKENVLTGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA  YA  R   G +L +   +   +AD+A+ +  A 
Sbjct: 275 GTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 335 LSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAVQVFGGNGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|34499373|ref|NP_903588.1| glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105223|gb|AAQ61579.1| probable glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 395

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 20/271 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G+D A++ ++ +K+ DG Y LSG K W  +SP +D F++ A+  +  +  F+
Sbjct: 139 FGLTEPDSGSDPASMKTRARKV-DGGYLLSGSKMWITNSPAADVFVVWAKDDDDEIRGFI 197

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           + + ++     GL    +  K   R++ T E+   +       LL  +    GP   +  
Sbjct: 198 LEKGMK-----GLSAPAIHGKFSLRASITGEIVMDDVLVSEDQLLPGVKGLKGPFGCLNK 252

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y   A  ++         A  Y   R   G  L    +++  +A++  +IA   + + 
Sbjct: 253 ARY-GIAWGAMGAAEFCWHAARQYTLDREQFGRPLAANQLIQLKLANMQTEIALGLSAAL 311

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++    DE ++  E       M  + K   C  A  +   A +  GG+G  +E  + RH 
Sbjct: 312 QVGRLMDEGRAAPE-------MISLIKRNNCGKALDIARVARDMHGGNGICDEFHVIRHV 364

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
               A +   G+ +   L +L   + G   F
Sbjct: 365 MNLEAVNTYEGTHDVHAL-ILGRAQTGIQAF 394


>gi|300994846|ref|ZP_07180959.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           45-1]
 gi|300406186|gb|EFJ89724.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           45-1]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|300904546|ref|ZP_07122385.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           84-1]
 gi|300403540|gb|EFJ87078.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           84-1]
          Length = 374

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYN--FEMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|323528962|ref|YP_004231114.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385964|gb|ADX58054.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 405

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA++   ++  D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 139 FALSEPEAGSDVAAMSLAARENGDA-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 197

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---- 314
              + D    GL      + I     A   L F+   G  +    +   P E  K+    
Sbjct: 198 SAFIVDADTPGLEIAERIDVIAPHPLA--RLHFA---GARVPRSQMLGAPGEGFKLAMRT 252

Query: 315 --LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +     A  S+   R ++AE I  A  R + G  L D  + +  +A +AL I ++  L
Sbjct: 253 LDIFRTSVAAASLGFARHAMAEGIARAASRTMFGQTLADFQLTQAKLAQMALTIDSSALL 312

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A   D+ +S + EAA A       K+   + A  VI  A++  GG G     ++  
Sbjct: 313 VYRAAWLRDQGESVTREAAMA-------KWHASEGAQQVIDAAVQLYGGMGVQSGVAVEM 365

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 366 LYREIRALRIYEGA 379


>gi|284164204|ref|YP_003402483.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013859|gb|ADB59810.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 30/271 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246
           P+ +     GL ++E   G+D+A + +  +K  D  Y L+G K+++ + +   +I L   
Sbjct: 116 PVAEGEQRSGLAVSEPDTGSDLAGMETTAEKDGDE-YVLNGEKYWIGNGVEADWITLYAR 174

Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                +   G    F+VP        +G   + +  K+  R++    +E  +     +  
Sbjct: 175 TGDDESNPYGNYSLFIVPT-----DTDGYEAEHIPEKMAMRASKQAHIELEDC---RIPA 226

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVM 355
            N+     E   +L  + +   ++VSG  + LA A       +   R   G  + D   +
Sbjct: 227 ENLIGEEGEGFWMLADFFNHGRIAVSGHGLGLAAAAIESTWEFVHDREQFGQTISDFQAV 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ L+  +A +L++R      E     E   Y    A ++K    + A  V  + 
Sbjct: 287 QHGLADMLLEFESARSLAWRAC----EKVQNGENEGY---WAAVSKTKTTETATEVAEQG 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           M+  GG   ++ER IAR YR+     I  GS
Sbjct: 340 MQFHGGRSVLDERRIARVYRDVRIPVIYEGS 370


>gi|229541767|ref|ZP_04430827.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326187|gb|EEN91862.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 389

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 99/264 (37%), Gaps = 41/264 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252
             LTE   G+D A I     K  D  + L+G K F+++     F M+  V        G 
Sbjct: 126 FALTEPGAGSDAANIKMTAVKDGDH-WVLNGEKVFITNGNEADFAMVFAVTDKEKGANGG 184

Query: 253 VGCFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           V CFLV R           + +  P  L ++             V +  +N  G L    
Sbjct: 185 VTCFLVDRDMGWRSEYIQTMGEWGPASLVFE------------DVRVPEANILGELGKGF 232

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           ++    +   + LI       +V      L  A+ YA+ R   G  + ++  ++  IAD 
Sbjct: 233 SLGMKWIGQGRWLI----PARAVGASERLLQMAMDYAKTRVTFGKPIAERQAIQWMIADS 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            ++I A   L          A   SE     R  A I K +   MA  V+   ++  GG 
Sbjct: 289 NVEIEATRWLVLH-------AAWLSETGKDNRHYASIAKLYGSNMANRVVDRVLQIHGGM 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY +E  I R YRE     I  G+
Sbjct: 342 GYTKELPIERWYREMRLWRIFEGT 365


>gi|41408503|ref|NP_961339.1| FadE3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118464909|ref|YP_880809.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254774395|ref|ZP_05215911.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41396859|gb|AAS04722.1| FadE3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166196|gb|ABK67093.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 397

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 24/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++ ++  DG Y + G K +L++  +   I  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRARRDPDGGYTIDGQKMWLTNGATSTLIAVLVRTDEGSDKPHRNL 188

Query: 254 GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             FLV + +  G    GL      +K+G +   T EL F + +     D+   T      
Sbjct: 189 TAFLVEKPVGFGEVVAGLRIPGKIDKLGYKGIETTELIF-DGYRAAADDILGGTPGQGFF 247

Query: 313 KILIYLDSAIMSVS----GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++  ++   ++VS    G+ +   E A+ YA++R   G  + +   +   +A++A  + 
Sbjct: 248 QMMDGIEVGRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVE 307

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  +    A   D  +          + A + KY   +    V  ++    GG GY +E
Sbjct: 308 AAHLMMVNAARLKDSGERND-------VAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKE 360

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             I R  R++P   +L+G G + +
Sbjct: 361 YEIERLMRDAP--FLLIGEGTSEI 382


>gi|294501718|ref|YP_003565418.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351655|gb|ADE71984.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 594

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 41/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D F++ A+++G +   F+V
Sbjct: 150 LTEPGSGSDALGARTTARLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G +S++T  L   +       +LG+  +  G V    IL
Sbjct: 210 ERQFP-----GVSVGPEEKKMGIKSSSTRTLILEDALVPKENVLGE--IGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   + +V   + +L     Y  +R      +    + +  +A +A  + A  +  
Sbjct: 263 NIGRYKLGVGAVGAGKRALEITSQYVNQRQQFKTPIAKFSLTQEKLATMASKLYATESSV 322

Query: 374 FRLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R    F++   + SEE            A YA I   + K +  +    ++ E ++  G
Sbjct: 323 YRTVGLFEDHMGQLSEEQQKDGKQIAASIAEYA-IECSLNKVFATESLDYIVDEGVQLHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMSEYEIERLYRDSRINRIFEGTNEINRLLVPGTYLRKALKGELPLLQKAQTLQEEL 441

Query: 469 FSTLEQDLGS 478
              + Q++G+
Sbjct: 442 MMLMPQEVGN 451


>gi|226361793|ref|YP_002779571.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240278|dbj|BAH50626.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 380

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 44/299 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           MTTP     W P   + E               +G+ +TE   G+D+  I +   +  D 
Sbjct: 103 MTTPEQKARWLPGTVTGE-------------TILGIAMTEPGTGSDLTGIRTTAVRDGDH 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  +    ++A     +   G  L+  ++E  +P G    R   KIG 
Sbjct: 150 -YVVNGGKTFISNGQNGTLFVVAVRTAPDKHKGLSLL--VVESDTP-GFSRGRNLEKIGL 205

Query: 282 RSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +  T EL F++       LLG+        V   P E + + +    A+ +  G+   L
Sbjct: 206 HAQDTSELTFTDMRVPVANLLGEEGQGFYQLVHNLPQERLSLSV---GAVAAAEGV---L 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAA 391
            + + Y + R+  G     QP+         L   A  A    LA ++ D+   +     
Sbjct: 260 EQTLAYVKERNAFG-----QPIAGFQNTQFVL---AELATELDLARTYLDDCIRQHVRGE 311

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                A   K+W  ++   V    ++  GG GY+ E ++AR + ++   +I  G+   M
Sbjct: 312 PTAARAARLKWWTTELQVRVADRCLQLHGGYGYMREYAVARAFVDARIQTIYGGTTEIM 370


>gi|167748223|ref|ZP_02420350.1| hypothetical protein ANACAC_02967 [Anaerostipes caccae DSM 14662]
 gi|167652215|gb|EDR96344.1| hypothetical protein ANACAC_02967 [Anaerostipes caccae DSM 14662]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 30/259 (11%)

Query: 202 LTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGRV 253
           LTE   G+D AA+ T+       G Y L+G K F+S      ++++         V+G +
Sbjct: 124 LTEPNAGSDAAAVRTTAVLDEETGEYVLNGTKCFISGGGQAKYLLIFALTDPSKGVKG-L 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            C LV    E G+P G    +++NK+G   + T EL F       +   N+        K
Sbjct: 183 SCILV----EKGTP-GFTVGKIENKMGIHGSETAELIFDQC---RVPKENLVGKEGAGFK 234

Query: 314 ILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           + +  LD A + V+   + +AE       ++++  +   +P+     ++  IAD+A    
Sbjct: 235 MAMNALDGARIGVAAQALGIAEGALDESVKYMNERVQFGKPIKALQGLQWYIADMATKTE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  + +  A      +  ++EAA A++ A     +   +A       ++  GG GY+++
Sbjct: 295 CAKWMIYYAAYLKSTGQPHTKEAAIAKLNASENARFVTNLA-------LQIHGGYGYMKD 347

Query: 428 RSIARHYRESPANSILLGS 446
             + R YR++    I  G+
Sbjct: 348 YPLERMYRDAKITEIYEGT 366


>gi|114799086|ref|YP_759398.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114739260|gb|ABI77385.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 391

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 36/312 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    T    + W PKI S +             +   + +TE   G+D+  + +  
Sbjct: 104 APYITAYGTEEQKQRWLPKICSGD-------------LVTAIAMTEPGAGSDLQGMKTTA 150

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLE--DGSPNGLCY 272
            K+    Y ++G K F+S+  +   I+L       +G  G  ++    E  +G+  G   
Sbjct: 151 -KLDGDHYVINGSKTFISNGQTADLILLCVKTDPTKGAKGISIICVETEAVEGA-GGFRR 208

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R  +K+G  +  T EL F +       LLG      G V+ M+ L   +  I+ + G+ 
Sbjct: 209 GRNLDKVGQHAADTSELFFDDVRVPAAHLLGG-EAGKGFVQLMQKLPQ-ERHIIGLQGVG 266

Query: 330 V---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +   ++ E ++Y + R   G  + D    +  +A+   +   A       A+   E   +
Sbjct: 267 MIERAIHETVNYVKGRKAFGQTIFDFQNTQFKLAEAKTEATVAKVF----ADHCTELLLK 322

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E  A     A ++KYW   +   +I E ++  GG GY++E  IA+ Y ++    I  G+
Sbjct: 323 EELDAST---ASMSKYWISDLQCKIIDECLQLHGGFGYMDEYPIAQMYADARVQRIYGGA 379

Query: 447 GNAMVLDVLNLL 458
              M + +   L
Sbjct: 380 NEVMKMLIARTL 391


>gi|111222877|ref|YP_713671.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150409|emb|CAJ62107.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 392

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           A  T+  ++  DG + LSG K W L    +  F++ A        FLV     D    GL
Sbjct: 134 ATPTTTAERAGDG-WALSGVKDWVLDGQSAGLFVVTATTAAGTSLFLV-----DAGAAGL 187

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             + L   + + +     +  + T G LLG  + +  P     +   LD+A+  ++  ++
Sbjct: 188 AVEALP--VVDPTRQVTRVTLTGTPGVLLG-ADGAGAP----GLARTLDAAVTLLAAEQL 240

Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +AEA     + YA++R   G  +     +K  +A + L++ AAT+     A + DE+ +
Sbjct: 241 GVAEAALASAVDYAKQREQFGRPIGSFQAIKHKLATVLLEVEAATSAVMYAAWTADESPA 300

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              E      +A I    C + A     E ++  GG G+  E S   + + +  + +LL
Sbjct: 301 ELPE------VASIAGLTCSEAALLAAGENVQVHGGIGFTWEHSAHLYLKRATTDRLLL 353


>gi|225439406|ref|XP_002264086.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 446

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 111/241 (46%), Gaps = 24/241 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++ +   ++  G + L G K W  +S  +D  I+ A+     ++  ++V
Sbjct: 181 LTEPDYGSDASSLKTTSSQVEGG-WILEGQKRWIGNSTFADVLIIFARNTTTNQINGYIV 239

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILI 316
            +    G+P GL   +++NKIG R     +++F   F   + D +   G    +D   ++
Sbjct: 240 KK----GAP-GLTATKIQNKIGLRIVQNGDIQFKKVF---VPDEDRLPGVNSFQDTNKVL 291

Query: 317 YLDSAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   +++   + +S+   +  H Y + R   G  L    + ++ + ++  +I A T + 
Sbjct: 292 AVSRVMVAWQPIGISMGAYDMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVG 351

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL   +++ K     A+ A       K W    A   +A   E +GG+G + +  +A+ 
Sbjct: 352 WRLCKLYEKGKMTPGHASLA-------KAWITLKARETLALGRELLGGNGILADFLVAKA 404

Query: 434 Y 434
           +
Sbjct: 405 F 405


>gi|154274762|ref|XP_001538232.1| hypothetical protein HCAG_05837 [Ajellomyces capsulatus NAm1]
 gi|150414672|gb|EDN10034.1| hypothetical protein HCAG_05837 [Ajellomyces capsulatus NAm1]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +  +K  DG  Y ++G  KW  +   +D F+   + +      L
Sbjct: 199 LAVTEAFAGSDVAGIRTTAEKTPDGKHYIINGTKKWITNGMWADYFVTACRTDKGYSVIL 258

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +PR       N +  +R+K      + AT  ++F N       LLG+ +   G +  M  
Sbjct: 259 IPR------DNNVETKRIKTSYSTTA-ATAFIQFDNVKVRVENLLGEEH--KGFIVIMSN 309

Query: 315 LIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA- 371
             +   A+        R  + E + +A +R V G  LI+QPV+++ +A +   + A+ + 
Sbjct: 310 FNHERWAMTCGVTRWCRTIVEECLKWANQRIVFGKPLINQPVIRQKLAKMISLVEASQSW 369

Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE 426
              +++++ +     +SR        +  PI   K +  + A  +  +A+   GG G  +
Sbjct: 370 LETITYQMCSMSYGERSR-------HLGGPIGLLKSYSTRCAHEIADDAVNIFGGRGITQ 422

Query: 427 E---RSIARHYRESPANSILLGS 446
               R + + +R    ++IL G+
Sbjct: 423 TGMGRVVEQFHRTYKFDAILGGA 445


>gi|149370026|ref|ZP_01889877.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [unidentified eubacterium SCB49]
 gi|149356517|gb|EDM45073.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [unidentified eubacterium SCB49]
          Length = 396

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +    + D  Y L+G K W  +   +D ++++AQ +   G   +  
Sbjct: 141 LSEPEAGSDATSQRTTAIDMGDH-YLLNGTKNWITNGGSADFYLVIAQTDKEKGHKGINA 199

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + + +  G      ++K+G R + T  L F++             FGF      +S G 
Sbjct: 200 FIVEKTWEGFEVGPKEDKLGIRGSDTHTLNFNDVKIPKENRIGEDGFGFKFAMKTLSGGR 259

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIA 363
           +               ++   + +A+  +     Y++ R   G  + +   +   +AD+ 
Sbjct: 260 I--------------GIAAQALGIAQGAYEMARDYSKIRKAFGTEICNHQAIAFKLADMH 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+I AA  L  + A   D   +    +A A++ A        K+A  V  EA++  GG+G
Sbjct: 306 LEIEAARHLVMKSAWEKDNGINYDMSSAMAKLKA-------SKVAMDVTVEAVQVHGGNG 358

Query: 424 YIEERSIARHYRESPANSILLGS 446
           +++E  + R  R++    I  G+
Sbjct: 359 FVKEYHVERMMRDAKITQIYEGT 381


>gi|311745067|ref|ZP_07718852.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577580|gb|EAZ81800.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 594

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 55/302 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  ++  +D FI+ A++E    +  F+
Sbjct: 147 LTEPDAGSDANSGKTKATLTEDGKHYLINGQKMWISNAGFADLFIVFAKIEEDKNLTAFI 206

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V +     S  G+     + K+G + ++T ++ F+              N F   +  LN
Sbjct: 207 VEK-----SFGGITMNEEEKKMGIKGSSTRQVFFNDCKVPVENMLSDRQNGFKIAVNILN 261

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +           I L S I+   G+R    +AI+Y+  R   G  +     +K  +A++A
Sbjct: 262 IGR---------IKLGSGILG--GVRTVTTKAINYSTERKQFGVSINSFGAVKSMLAEMA 310

Query: 364 LDIAAATALSFRLA-------NSF-------DEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +    + +L +R         N F       +EAK +  E  +A +   I K    ++  
Sbjct: 311 IRTYVSESLCYRAGQDIEDQINEFITDGMPENEAKLKGVEM-FA-MECAIAKIHGSEVLD 368

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-----GTNL 464
            V+ + ++  GG GY  E  + R YR++    I  G+     + ++ +L K       NL
Sbjct: 369 YVVDQGVQIYGGMGYSAEAPMERAYRDARIARIYEGTNEINRMLMIGMLLKRAMKGEVNL 428

Query: 465 FE 466
           FE
Sbjct: 429 FE 430


>gi|329937929|ref|ZP_08287411.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302886|gb|EGG46775.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 54/318 (16%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QK 220
           L  T    ++W P++ + E             +    GLTE  GG+D  A  +     +K
Sbjct: 100 LFGTEEQKREWLPRLCAGE-------------ILGAFGLTEPEGGSDAGATRTTARLDEK 146

Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271
            ++  + ++G K F+++  +D    + +  V  R       +   +VP     G+P G  
Sbjct: 147 TNE--WVINGTKCFITNSGTDITGLVTVTAVTDRKPDGRPVISSIIVP----SGTP-GFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                +K+G  ++ T EL F++       LLG+           + L  LD   ++++ +
Sbjct: 200 VAAPYSKVGWNASDTRELSFADVRVPAANLLGERGRGYA-----QFLRILDEGRIAIAAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ R   G  + +   ++  IAD+        A + RLA  + +A
Sbjct: 255 ATGLAQGCVDESVKYAKERKAFGRHIGEYQAIQFKIADM-----ETKAHTSRLA--WRDA 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR       +  A + K +   +A     EA +  GG G++ E  +AR +R+  A  + 
Sbjct: 308 ASRLVSGDPFKKEAALAKLYSSTIAVDNAREATQIHGGYGFMNEYPVARMWRD--AKILE 365

Query: 444 LGSGNAMVLDVLNLLEKG 461
           +G G + V  +L   E G
Sbjct: 366 IGEGTSEVQRMLIARELG 383


>gi|149280430|ref|ZP_01886550.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149228844|gb|EDM34243.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 396

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 19/239 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G++   + +  +   D  Y L+G K W  ++P SD  ++ A+ E G++   +
Sbjct: 140 FGLTEPDHGSNPGGMVTNIKDQGDH-YLLNGAKMWISNAPFSDIAVVWARDENGKIRGLI 198

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       +  D+    GP+  +  
Sbjct: 199 VERGME-----GFSTPETHNKWSLRASATGELVFDNVKVPKANIFPDIMGLKGPLGCLNQ 253

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y   A  ++         A+ Y++ R   G  +    + ++ +A++  +I  A  L +
Sbjct: 254 ARY-GIAWGALGAAMDCYDTALRYSKERVQFGKPIAGFQLQQKKLAEMITEITKAQLLVW 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RL     E ++ +E+ + A       K    ++A  V   A + +GG G   E SI RH
Sbjct: 313 RLGVLKSENRASAEQISMA-------KRNSVELALDVARNARQMLGGMGITGEYSIMRH 364


>gi|126434172|ref|YP_001069863.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233972|gb|ABN97372.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 471

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 22/245 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L + E R   D  A+ +   +   G Y L+G K  + +   ++ FI+ AQ++GR   F+V
Sbjct: 228 LAIAEPRPLFDPTALKATAVRTPGG-YRLTGTKSLVPAAADAEVFIIAAQLDGRPAMFIV 286

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE----D 311
                + +  GL        +G R+ A   +E  N     G  LG++      +E    +
Sbjct: 287 -----ESASEGLTVTP-DPSMGVRAAALGRVELDNVAVPLGNRLGEVEAPAPEIERNYRE 340

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  L  A ++V      L   + Y + RH  G  +  +  +    A+IA+++     
Sbjct: 341 AIALSRLGWAALAVGTSHAVLDYVVPYVKERHAFGEPIAHRQAVAFMCANIAIELDGLRL 400

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++R A+  ++    + EAA A       K         +  + ++ +GG GY +E  + 
Sbjct: 401 ITWRGASRAEQGLPYAREAALA-------KRLGTDKGMQIGLDGVQLLGGHGYTKEHPVE 453

Query: 432 RHYRE 436
           R YR+
Sbjct: 454 RWYRD 458


>gi|331657673|ref|ZP_08358635.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
 gi|315299709|gb|EFU58949.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           16-3]
 gi|331055921|gb|EGI27930.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
          Length = 384

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLKTGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|289640641|ref|ZP_06472813.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289509530|gb|EFD30457.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 399

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 33/285 (11%)

Query: 190 PMQKTSVAIGLGLTEKRG---------GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           P QK  +   +   E RG         G+D++AIT++     D  Y ++G K +L++   
Sbjct: 108 PEQKQRLLPKMATGEIRGAFSMSEPGCGSDVSAITTRATPDGDD-YVINGQKMWLTNGAR 166

Query: 241 DAFI--MLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
              +  ++   EG       +  FL+ +    G+  G+       K+G +   T E+   
Sbjct: 167 AGLVATLVKTDEGADSVYRNMTTFLLEKEPGFGTHEGITIPGKLEKLGYKGVETTEMVLD 226

Query: 293 N---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--GMRVSLAE-AIHYARRRHVSG 346
           N       +LG L+        M   + +    ++    G+ +   E AI YA++R   G
Sbjct: 227 NHRVPAASILGGLDGRGKGFYQMMDGVEVGRVNVAARACGIMIRAFELAISYAQQRRTFG 286

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D   +   +A++A  + A   +    A   D  +    EA  A+ +A     +C +
Sbjct: 287 HQIADHQAIAFKLAEMATKVEAGHLMMVNAARKKDSGQRNDVEAGMAKYLA---SEYCFE 343

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               V  E+    GG GY +E  I R +RE+P   +L+G G + V
Sbjct: 344 ----VTTESFRIHGGYGYSKEYEIERLFREAP--FMLIGEGTSEV 382


>gi|158392727|dbj|BAF91137.1| acyl CoA dehydrogenase [Pseudomonas putida]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----C 255
           LTE + G++   + ++ +++ D  + ++G K F S+       I+ A  +  +G      
Sbjct: 126 LTEPQAGSEAHNLRTRAERVGDE-WVINGSKQFASNARRAGLAIVFAVTDPELGKKGLSA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP         G    R ++K+G R++ T  +  +N       LLG+    L ++   
Sbjct: 185 FLVPT-----DNKGFVVDRSEHKMGIRASDTCAVTLNNCRVPAANLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ Y+R R   G  + +   +   +AD+ + + A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYSRDRIQFGKPINEHQSVANLLADMQVQLNA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A      K    EA  A++ A        +MA  V ++A++  GG GY+E+ 
Sbjct: 296 ARLLILHAARLRSAGKPCLSEALQAKLFAS-------EMAERVCSKAIQVHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  GS
Sbjct: 349 PVERYYRDARITQIYEGS 366


>gi|153953092|ref|YP_001393857.1| acyl-CoA dehydrogenase family protein [Clostridium kluyveri DSM
           555]
 gi|219853743|ref|YP_002470865.1| hypothetical protein CKR_0400 [Clostridium kluyveri NBRC 12016]
 gi|146345973|gb|EDK32509.1| Bcd [Clostridium kluyveri DSM 555]
 gi|219567467|dbj|BAH05451.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 379

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 24/282 (8%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231
           DW  +   ++Y      P+ K       GLTE   GTD A    Q   + +G  Y L+G 
Sbjct: 100 DWGTEEQKQKY----LVPLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLEGDHYVLNGQ 153

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++   +D F++ A  +   G   +   + +    G    + ++K+G R+++T EL 
Sbjct: 154 KIFITNGAYADTFVIFAMTDRSKGTRGITAFIVEKDFPGFSIGKSEDKLGIRASSTTELI 213

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHV 344
           F N    ++   N+     +   + ++ LD   + ++   +     +LAEA++Y + R  
Sbjct: 214 FENC---IVPKENMLGKEGKGFTVAMHTLDGGRIGIAAQALGLAEGALAEALNYMKERKQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L     +   +A++   I A   L ++ A +       S EAA A++ A       
Sbjct: 271 FGKALYKFQGLAWMVAELDTKIEAVKQLVYKAAVNKQMGLPYSVEAARAKLAA------- 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A     + ++  GG G+ ++  + R  R++    I  G+
Sbjct: 324 ATVAMETTTKVVQIFGGYGFTKDYPVERMMRDAKITEIYEGT 365


>gi|322368929|ref|ZP_08043496.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320551660|gb|EFW93307.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 380

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 33/264 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGC 255
           LTE   G+D + + +  +K  D  + ++G K F+++      +++  V       G +  
Sbjct: 125 LTEPGSGSDASDMDTTAEKDGD-EWVINGTKQFITNASVAGSVLVKAVTDSDAGYGGIST 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F+V    +DG         + +K+G  ++ T E++F++       LLG+     G  +  
Sbjct: 184 FIVDPEEDDG----FEVTTVWDKMGLNASPTCEIQFTDCRVPEDRLLGEEG--DGWEQTK 237

Query: 313 KILIYLDSAIMSVSGMRVSLA----EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIA 367
           K L   D   +S++ +   +A    EA H Y++ R   G  +     ++  I D+   I 
Sbjct: 238 KTL---DGGRISIAALSTGIAQGAYEAAHEYSQEREQFGKPISKFDAIRNKIVDMDRKIE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L+ + A  +DE  S S E+A A++ A        + A  V  +A++ +GG GY E+
Sbjct: 295 RSRLLTHKAACKYDEGYSVSHESALAKLDA-------SESARKVSEDAVQVLGGYGYTED 347

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
            +  R  R+  A  + +G G + +
Sbjct: 348 FAPQRFLRD--AKLMEIGEGTSEI 369


>gi|301771231|ref|XP_002921054.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 438

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y L+G K W  +SP++D F++ A+ E      +
Sbjct: 177 FGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNSPVADLFVVWARCEDSC---I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R+++T       VE+   N    +L D++   GP  
Sbjct: 234 RGFLLEKGM-RGLSAPKIEGKFSLRASSTGMIVMDSVEVPEEN----VLPDVSGLAGPFG 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  +
Sbjct: 289 ------CLNNARFGIAWGVLGAAEFCLHTARQYTLDRIQFGAPLARNQLIQKKLADMLTE 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 343 ITLGLHTCLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGIS 395

Query: 426 EERSIARH 433
           +E  + RH
Sbjct: 396 DEYHVIRH 403


>gi|226365188|ref|YP_002782971.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243678|dbj|BAH54026.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 44/273 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
           L  TE   G+D A+I +    + DG Y ++G K W  ++  +  +++ A+ +     G V
Sbjct: 131 LATTEPGSGSDAASIVTTAACV-DGGYRINGQKAWISNAGAAQFYVVFAKTDRTQRSGGV 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF--LL 299
             FL+ +  E     G+ +     K+G R+    E+ F N F            GF  L+
Sbjct: 190 SAFLIEKGAE-----GMTFGEPMKKMGQRAIVCREIFFDNVFVPEENRLGAEGQGFYGLM 244

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G  ++S            +     +V   R +   A+ YA+ R   G  +I+   +   +
Sbjct: 245 GTFDISR-----------VVLGAAAVGAARAAYEYALDYAKSRKQFGVPIIEHQAVAFRL 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  I +A  L    A   D   +       AR +A + K    + A  V   A++ +
Sbjct: 294 ADMATRIESARLLVHHAARIIDSGGN-------ARGIAAMAKLTASETAMFVTHAAVQTL 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GG GY  E  + +  R+     I  G+ + M L
Sbjct: 347 GGWGYSREYPVEQWMRDVKLEEIEEGTSDIMKL 379


>gi|320010418|gb|ADW05268.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 385

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 23/282 (8%)

Query: 176 PKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           P I S   D   K   P+ K        L+E   G+D A + ++  +  D  + L+G K 
Sbjct: 103 PVILSGSEDLKKKYLGPLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKR 161

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++  S+ + ++A  +       +   + + S  G+ +   + K+G + + T E+   
Sbjct: 162 WITNAGESEYYTVMAVTDPEKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLD 221

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           N       ++G+    TG    MK    LD   ++++   + +A+     A  Y + R  
Sbjct: 222 NVRIPADRMIGEEG--TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQ 276

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A+ + AA  L++  A     AKS   +           K + 
Sbjct: 277 FGKPIADFQGIQFMLADMAMKLEAARQLTYSAA-----AKSERVDGDLT-FFGAAAKCFA 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A  V  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 331 SDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|307320823|ref|ZP_07600233.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893533|gb|EFN24309.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 387

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 32/292 (10%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226
           H +      +R   P  K+   P   +   +G L ++E   G+D+ ++  +  K  D  Y
Sbjct: 95  HSNLCVNQINRNGKPAQKSRYLPKLISGEHVGALAMSEPGAGSDVVSMKLRADKRGD-RY 153

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIG 280
            L+G K W  + P +D  ++ A+ +   G    PR     L+E   P     Q+L +K+G
Sbjct: 154 VLNGGKMWITNGPDADVLVVYAKTDPAAG----PRGITAFLVEKAFPGFSAGQKL-DKLG 208

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAE 334
            R + T EL F++     + + NV  G  E +K+L+  LD   + +S      M   L  
Sbjct: 209 MRGSNTSELIFTDCE---VPEENVLGGVGEGVKVLMSGLDYERVVLSAGPLGIMAACLDV 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y   R   G  + +  +M+  +AD+ + + AA A  + +A + D  ++  ++AA   
Sbjct: 266 VVPYLHERKQFGQPIGEFQLMQGKLADMYVTMNAARAYVYAVAAACDRGETARKDAAGCI 325

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +       +  + A A+  EA++ +GG+GY  +    R  R++    I  G+
Sbjct: 326 L-------YAAEKATAMALEAIQALGGNGYTNDYPAGRLLRDAKLYEIGAGT 370


>gi|297690735|ref|XP_002822764.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           1 [Pongo abelii]
          Length = 441

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 38/259 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y LSG K F+S +  SD ++++ +  G     + C 
Sbjct: 159 LTEPGSGSDAASLLTSAKKQGDH-YILSGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 218 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 267

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 268 ----AVKGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMAT 323

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 324 RLVAAR-LMIR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 377

Query: 425 IEERSIARHYRESPANSIL 443
           +++ ++ ++ R+S  + IL
Sbjct: 378 LKDYAVQQYVRDSRVHQIL 396


>gi|229588382|ref|YP_002870501.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229360248|emb|CAY47105.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 378

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 36/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  + +    + DG  Y ++G K F+++  +++  I++A+ + + G   
Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGYLAELVIVVAKTDPKAGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
               L +    G    +   K+G ++  T EL F +               F +L+ +L 
Sbjct: 182 TSLFLVEADTPGFDKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + +      AI ++S    +LA  + Y R R   G  + D    +  +A++A
Sbjct: 241 ----PQERLTV------AIGALSSAEAALAWTLEYTRERKAFGKAIADFQNTRFKLAEMA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        +      E K     AA A       KYW   +   V+ E ++  GG G
Sbjct: 291 TEIQIGRVFVDKCMALHLEGKLDVPTAAMA-------KYWATDLQCKVLDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           ++ E  IAR + ++    I  G+   M
Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370


>gi|145223141|ref|YP_001133819.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443598|ref|YP_004076477.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215627|gb|ABP45031.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315261901|gb|ADT98642.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 386

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 49/283 (17%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236
           F  E       P+  +  A+G  GLTE  GG+D  A  +  +  SDG  + ++G K F++
Sbjct: 106 FGNESQKQEWLPLLASGKALGAFGLTEAGGGSDAGATKTTAK--SDGASWVINGTKQFIT 163

Query: 237 SPMSD--AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           +  +D    + +  V G       +   LVP   E     G   +   NK+G  ++ T  
Sbjct: 164 NSGTDITKLVTVTAVTGENNGKKEISSILVPVPTE-----GFTAEPAYNKVGWNASDTHP 218

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----E 334
           L F         D+ V   P E++           L  LD   ++++ + V  A     E
Sbjct: 219 LSFD--------DVRV---PQENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDE 267

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YA+ R   G  +            IA  IA   A +     ++ +A +        +
Sbjct: 268 SVKYAKERQAFGAAI-------GTYQAIAFKIARMEARAHTARAAYYDAAALMLSGKPFK 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             A + K    + A     +A +  GG G++ E S+ARHYR+S
Sbjct: 321 KAASVAKMVASEAAMDNARDATQIFGGYGFMNEYSVARHYRDS 363


>gi|88802294|ref|ZP_01117821.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781152|gb|EAR12330.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 602

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 39/273 (14%)

Query: 202 LTEKRGGTD-----IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RV 253
           LTE   G+D      AA+ S  +K     Y ++G K W  ++   D  I+ A++E    +
Sbjct: 151 LTEPGAGSDANSGKTAAVLSADEKT----YTINGQKMWISNAGFCDLMIVFARIEDDKNI 206

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E   PNG+     ++K+G R+++T ++ F++T       L+V  G     K
Sbjct: 207 TGFIVEYDRE--KPNGIVLGEEEHKLGIRASSTRQVFFNDTVIPAENMLSVRGG---GFK 261

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +       +  A   +   R     A+ YA  R      + D   +K  +A++A ++ 
Sbjct: 262 IAVNALNVGRIKLAAACIDSQRRITETALKYATERKQFKTSIADFGAIKGKLAEMATNVY 321

Query: 368 AATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           A  + S+R A              NS  EA+ +  E  YA I   I K    +   A   
Sbjct: 322 AGESASYRAAKDIEDRIALRLEEGNSHSEAELKGVE-EYA-IECSILKVTVSEDVQACAD 379

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           E ++  GG G+ EE  +   +R++  + I  G+
Sbjct: 380 EGIQIFGGMGFSEETPMEAAWRDARISRIYEGT 412


>gi|313221167|emb|CBY31992.1| unnamed protein product [Oikopleura dioica]
 gi|313229914|emb|CBY07619.1| unnamed protein product [Oikopleura dioica]
          Length = 407

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVE-------- 250
           +G+TE   G+D+  + +    ++DG  Y ++G K F+S+ +   + +LA V         
Sbjct: 149 IGMTEPGTGSDLQGLKTTA--VADGDDYVINGSKVFISNGIMADYCILAVVTDPSASNKA 206

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSN--------------- 293
           G +  FLV             + R KN  K+G ++N T EL F +               
Sbjct: 207 GAMSLFLVD----------TSFNRGKNLKKVGVKANDTAELFFDDLRVPKSAILGGPDCL 256

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              FGFL+ +L          +++I     +   +G+         Y + R   G  LI 
Sbjct: 257 NQGFGFLMNELARE-------RLMI----GVQCAAGLEGMFELTRGYVKERKAFGKELIK 305

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +A+I  +  AA   SF      D+A             A + KY   + A   
Sbjct: 306 LQTIQHRLAEIKTE--AAFCRSF-----VDKAMELQVNEELDYTTASMAKYMVSEKAHVN 358

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I++ ++  GG GY+ E  IAR Y +S    +  G+   M
Sbjct: 359 ISKMLQLFGGWGYMWEYPIARAYADSRVAMVYGGANEIM 397


>gi|307330312|ref|ZP_07609458.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306884008|gb|EFN15048.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 400

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 28/271 (10%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----LL 262
           G+D++AITS+  +  D  Y L+G K +L++  +   + +    G     + P       L
Sbjct: 135 GSDVSAITSKAVRDGDE-YVLNGQKMWLTNGATSTLVAVLCRTGDAQEGVAPHKAMTTFL 193

Query: 263 EDGSPN------GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVEDM 312
            +  P       GL      +K+G +   T EL           +LG + N     + D 
Sbjct: 194 IEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPADRVLGGMPNRGFYQMMDG 253

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  ++ A       R +    + YA++RH  G  +     ++  +A++   + A+ A+
Sbjct: 254 VEVGRVNVAARGCGVARRAFELGVAYAQQRHTFGKPIAQHQAIQFKLAEMGTKVEASHAM 313

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   D       EA  A       KY   +    V+ +A    GG G+ +E  I R
Sbjct: 314 MVNAARKKDSGARNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEYEIER 366

Query: 433 HYRESPANSILLGSGNAMVLDVL---NLLEK 460
            YRE+P   +L+G G A +  ++    LLE+
Sbjct: 367 LYREAPM--LLIGEGTAEIQKMIIGRRLLEE 395


>gi|212530834|ref|XP_002145574.1| acyl-CoA dehydrogenase [Penicillium marneffei ATCC 18224]
 gi|210074972|gb|EEA29059.1| acyl-CoA dehydrogenase [Penicillium marneffei ATCC 18224]
          Length = 434

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   TP   + W P + S               +   LG+TE   G+D+A IT+  ++ 
Sbjct: 133 IARFGTPEQRRRWLPGVAS-------------GKIRFCLGITEPDAGSDVANITTTAKRE 179

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +  Y ++G K ++++ +   +   A   G  G   V  L+      G+  +R+ N   N
Sbjct: 180 GNH-YIVNGAKKWITNGIWADYCTAAVRTGGPGRKGVSVLVIPLKEKGVNRKRMHNSGVN 238

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL--------IYLDSAIMSVSGMRV 330
            S +T  LEF +       L+G+ N      E  +I+        + L SA + ++  RV
Sbjct: 239 ASGSTF-LEFDDVRVPAEHLIGNEN------EGFQIIMSNFNPERLSLASAALRLA--RV 289

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + +A +YA +R   G  LI +  ++  I    + I  A +   +L    +  K R    
Sbjct: 290 CVQDAFNYAVQRETFGAPLITRQAIQSKITKCGMLIEPAQSFLEQLVYIIETTKDRPNAV 349

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
               + A + K    +     + EA +  GG+GY
Sbjct: 350 NIGGMTA-LLKVMSTRALEKSVREAQQIFGGAGY 382


>gi|86134097|ref|ZP_01052679.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85820960|gb|EAQ42107.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 602

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 31/269 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +   DG  Y ++G K W  ++   +  I+ A++E    +  F+
Sbjct: 151 LTEPGAGSDANSGKTTAELSEDGKSYKINGQKMWISNAGFCNLMIVFARIEDDKNITGFI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V    +  +PNG+     ++K+G R+++T ++ F++T       L+V  G     KI + 
Sbjct: 211 VE--YDAANPNGITLGEEEHKLGIRASSTRQVFFNDTVVPAENMLSVRGG---GFKIAVN 265

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +  A   +   R  L  A+ YA  R      + D   +K  +A++A +  A  +
Sbjct: 266 ALNVGRIKLAAACIDSQRRVLTTALQYANERKQFKTPIADFGAIKAKLAEMATNCYAGES 325

Query: 372 LSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            S+R A              NS  EA+ +  E  YA I   I K    +   A   E ++
Sbjct: 326 ASYRAAKDIEDRIEMRMAAGNSHQEAELKGVE-EYA-IECSILKVTVSEDVQACADEGIQ 383

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG G+ EE  +   +R++    I  G+
Sbjct: 384 IFGGMGFSEETPMEAAWRDARIARIYEGT 412


>gi|110639955|ref|YP_680165.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282636|gb|ABG60822.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 597

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 72/345 (20%)

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTNKAPMQ 192
           L L   + AGH  S +V  A+   + T P ++       K + PK+ S E+         
Sbjct: 99  LLLTEIVGAGH--SFAVALAAHTGIGTLPILYFGTEEQKKKYLPKLASGEW--------- 147

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE 250
           K S      LTE   G+D  A  ++    +DG  Y L+G K W  ++  +D FI+ AQ++
Sbjct: 148 KASYC----LTEPGSGSDALAAKTKAVLSADGSHYILNGQKMWITNAGFADTFIVFAQID 203

Query: 251 G-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302
           G +   F+V +        G+     ++K+G + ++T ++ F+       N  G      
Sbjct: 204 GDKFTGFIVEK------GEGVTLGNEEHKMGIKGSSTRQVFFNDCKVPKENVLG------ 251

Query: 303 NVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354
            +  G +    IL    I L +A +  S  RVS   +I YA+ R     I   QP+    
Sbjct: 252 EIGKGHLIAFNILNIGRIKLAAAALGGS-TRVSTL-SIQYAKER-----IQFKQPIANFG 304

Query: 355 -MKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYAR-----IMAPITK 401
            ++  +A+ A+ I    +  +R      +A+          EEA  A      I   + K
Sbjct: 305 AIQYKLAEQAIKIYTVQSAMYRAGQGIQDAEEELVKQGKTYEEALLAAAQEYAIECAMLK 364

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +    V  E ++ +GG G+  +  + R YR+S  N I  G+
Sbjct: 365 VAGSETLDYVSDEGVQILGGYGFSADYPMDRSYRDSRINRIFEGT 409


>gi|288916387|ref|ZP_06410765.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288352158|gb|EFC86357.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 417

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 36/246 (14%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG------CFLVPR 260
           G+D  A+T++ ++I DG + + GHKWF++      F I +A+  G  G       FLV  
Sbjct: 139 GSDPRALTTRAERI-DGGWRIQGHKWFITGADGAGFAICMARTSGTPGDAGGATMFLV-- 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN-------VSTGPVE 310
             +  +P     + ++    +     VE+ F N       +LG ++       V  GP  
Sbjct: 196 --DADNPGMKIVRHIETLDESLFGGHVEMVFENCEVPDEAVLGAVDQGFQYAQVRLGPAR 253

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
               + +L  A       R +   A+  +  R + G  L D  + ++AIAD  +DIAA+ 
Sbjct: 254 MTHCMRWLGIA-------RHAQDLAVRRSAERELFGSRLGDLGMTQQAIADSEIDIAASR 306

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  +     D+ +S  +  A       I K +C +    V+  +++  G  G   + ++
Sbjct: 307 GLILQACWELDQGRSAGQSTA-------IAKTFCAEAVWRVVDRSLQICGALGVSGDIAL 359

Query: 431 ARHYRE 436
           +R  RE
Sbjct: 360 SRFLRE 365


>gi|111223285|ref|YP_714079.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150817|emb|CAJ62521.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 388

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 26/257 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257
           + + E  GG D A +        DG  + L+G K F+   ++ D  ++ A+ E  VG F 
Sbjct: 140 VAVAEDGGGWDAAGVRCSAVGDGDGGGWRLTGTKSFVPDGLAADLLVVAARTEAGVGLFA 199

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V     DG+ +G+    L+     R  A V L+     G     L   T P ++     +
Sbjct: 200 V-----DGAADGVSRAALEVFDLTRRLARVRLD-----GVAATPL---TAPADEAAFDRF 246

Query: 318 LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+A ++V+  +V     +LA A+ YA+ R   G  +     +K   AD  +D+ +A + 
Sbjct: 247 LDAARIAVAAEQVGGADFTLAMAVGYAKERVQFGRAIGSFQAVKHLCADAFVDVESARSA 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  A +       ++++     +AP+ K +C +   A     M+  GG  +  E     
Sbjct: 307 AYYGAWAV------AQDSPEVPTVAPLAKAFCSEAFFATARTNMQVHGGISFTYEHPAHL 360

Query: 433 HYRESPANSILLGSGNA 449
           +YR + +   L GS  A
Sbjct: 361 YYRRAKSGVQLWGSPRA 377


>gi|56478645|ref|YP_160234.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314688|emb|CAI09333.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 125/314 (39%), Gaps = 75/314 (23%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225
           TP   + W PK+ S E+              I + +TE  GG+D+A + +  ++  DG  
Sbjct: 106 TPEQTRKWMPKLVSGEH-------------FIAVCVTEPGGGSDVANVRTTARR--DGNE 150

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F++    +D  I+ A+  G     L   ++E     G    R   K+G  + 
Sbjct: 151 YVINGSKTFVTMGSQADLAIVCARTGGPGKDGLSMFMVEVRDCPGFHLGRRLKKVGQHAI 210

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDM-------------------KILIYLDSAIMSV 325
            T E+         L DL V   PVE++                   +++I    A+ S+
Sbjct: 211 DTHEV--------FLEDLRV---PVENLLGGVEGKAFGGAMSGFDRERLVI----ALTSI 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGIL---------IDQPVMKRAIADIALDIAAATALSFRL 376
           +    ++   + YA+ R + G  L         + + + +  I  + +D      L+   
Sbjct: 256 ATAERAIELTVDYAKERKMFGQTLWGFQNTRIKLAECMTEAKIGRVFIDTLIMKVLNGEP 315

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +S D A               + K+WC +    +I E ++  GG GY+ E  IAR + +
Sbjct: 316 VDSADSA---------------MAKWWCSEKQNRIIDECLQFFGGYGYMMEYPIARLFVD 360

Query: 437 SPANSILLGSGNAM 450
           +    I  G+  A+
Sbjct: 361 ARVQKIYGGANEAL 374


>gi|167565311|ref|ZP_02358227.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 377

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 41/272 (15%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQ 248
           T   IG   LTE + G++   + ++ + + DG + L+G K F++    + ++  F M   
Sbjct: 116 TGKTIGAFSLTEPQAGSEAHNLRTRAE-LRDGRWILNGSKQFVTNGARAGLAIVFAMTDP 174

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            EG+ G   FLVP         G    + + K+G R++ T  +   N     +   N+  
Sbjct: 175 DEGKRGLSAFLVP-----ADTPGFIVGKPEKKMGIRASDTCPITLENC---AIPQENLLG 226

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-EAI-----------HYARRRHVSGGILIDQPV 354
              E +KI      A+ ++ G R+ +A +AI            YAR R   G  + +   
Sbjct: 227 KRGEGLKI------ALSNLEGGRIGIAAQAIGIARAAFDRARRYARERVQFGKPIAEHQA 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A           EA+ A++ A        +MA AV ++
Sbjct: 281 IAEKLADMATQINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSD 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG G++ +  + RHYR++    I  G+
Sbjct: 334 AIQIHGGYGFLVDYEVERHYRDARITQIYEGT 365


>gi|220929048|ref|YP_002505957.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
 gi|219999376|gb|ACL75977.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
          Length = 400

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 48/309 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++T A ++    T      W  KI          A  Q     +G  L+E + G+D  + 
Sbjct: 94  TITGAQLITKFGTDEQKNQWLTKI----------ANDQTKRFLMGFALSEPQTGSDNMSP 143

Query: 215 TSQG-----QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-------EGRVGCFLVPRL 261
                     +++DG Y ++G K F+++  ++  +++ A+        +G +  FLVP  
Sbjct: 144 NPNAGMLTTAELTDGQYIINGTKSFITNAGIAGLYLVWARTDKSKGAPQGGLSVFLVP-- 201

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
                  GL   ++++K+GNR +   EL F N       LLG   +   PV     L  +
Sbjct: 202 ---ADAPGLKVGKIEDKMGNRLSQQGELIFENCIIPASNLLGKEGMGL-PV----CLAMI 253

Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++   +V  +   +A+A       YA+ R   G  +I+Q  +   +A+I + I ++  L 
Sbjct: 254 ENRFSTVGAIGTGIAQAAFNISYKYAKERVQGGAPIINQQAISHKLANILIAIESSRLL- 312

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                 + +A    +      ++  ++K    + A     E ++ +G  GY  E    + 
Sbjct: 313 ------YQKAAWHLDNMIPGMVIGSMSKVAGSEAAIMASNETIQILGCYGYSREYPAEKL 366

Query: 434 YRESPANSI 442
            R+S A SI
Sbjct: 367 LRDSKALSI 375


>gi|881606|gb|AAB09615.1| similar to product encoded by Bacillus subtilis short chain
           acyl-CoA dehydrogenase gene, GenBank Accession Number
           Z49782
          Length = 379

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 34/276 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  ++ +   K  +G Y L+G K F+++   +D +I  A  +   G   +  
Sbjct: 123 LTEPHSGSDAGSLRTTAIK-KNGKYLLNGSKIFITNGGAADIYITFALTDPDQGRHGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306
            + + +  G    + + K+G   + T EL F N               F   + +LNV  
Sbjct: 182 FIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGR 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +  A  ++     +L  A+ YA++R   G  +     +   +AD+A   
Sbjct: 242 -----------IGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMATRA 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  +   +  +EA+ A       K +    A     +A++  GG GY++
Sbjct: 291 EAARHLVYHAADLHNRGLNCGKEASMA-------KQFASDAAVKAALDAVQIYGGYGYMK 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +  + R  R++    I  G+     L +   L  GT
Sbjct: 344 DYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLGGT 379


>gi|300712832|ref|YP_003738644.1| Butyryl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126516|gb|ADJ16853.1| Butyryl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 413

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 22/271 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252
            GLTE   G+D   + ++ +K  D  + ++G K ++S +  SD  I+ A+ + +      
Sbjct: 146 FGLTEPAAGSDPRGMETRAEKDGDE-WVINGTKHYISWAGDSDFIILFARTKPKGDDIND 204

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  FLVP   +  S   +   R +       N  V +   N  G + G L ++   + 
Sbjct: 205 HGITTFLVPSDSDGISMRSIPVIRPEYPFEVTLN-DVRVPDENVLGEVDGGLGIAKQCLG 263

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + ++L     A  S+  +  S+   I +A  R V    L D+  ++  IA  A+D  AA 
Sbjct: 264 ESRVLY----AANSLGPIDQSIRMGIEWANNRVVGDEKLADKQAIQWKIAKSAVDYQAAK 319

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              +  A  FD+ +         R  + ITKY   +    V+   ++  GG+G   +  +
Sbjct: 320 YSVYHAAQRFDDGED-------IRHASSITKYQTTETLWTVLDRMVQIHGGAGVDGDLPL 372

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R  RES    I  G     +  +   L KG
Sbjct: 373 ERWLRESRVRRIGEGPSEIQLKTIARNLLKG 403


>gi|281353034|gb|EFB28618.1| hypothetical protein PANDA_009866 [Ailuropoda melanoleuca]
          Length = 410

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++ +   S+  Y L+G K W  +SP++D F++ A+ E      +
Sbjct: 172 FGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNSPVADLFVVWARCEDSC---I 228

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R+++T       VE+   N    +L D++   GP  
Sbjct: 229 RGFLLEKGM-RGLSAPKIEGKFSLRASSTGMIVMDSVEVPEEN----VLPDVSGLAGP-- 281

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  +
Sbjct: 282 ----FGCLNNARFGIAWGVLGAAEFCLHTARQYTLDRIQFGAPLARNQLIQKKLADMLTE 337

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 338 ITLGLHTCLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGIS 390

Query: 426 EERSIARH 433
           +E  + RH
Sbjct: 391 DEYHVIRH 398


>gi|294677101|ref|YP_003577716.1| isobutyryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294475921|gb|ADE85309.1| isobutyryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 32/265 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ + +  G Y L+G K F+S    SDA++ + +  G  G   +  
Sbjct: 124 LTEPGSGSDAAALRTRAEAVPGG-YKLNGTKAFISGGGYSDAYVTMVRTGGE-GPKGIST 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L+ +    GL +  L++K+G R+  T ++ F +    +  +  V          +  LD 
Sbjct: 182 LVVEAGTKGLSFGGLEDKMGWRAQPTAQVNFDDC--MVAAENLVGVAGKGFAYAMAGLDG 239

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             ++++   +  A+A   A  R++           +R     +LD     AL FRLA   
Sbjct: 240 GRLNIAASALGGAQAAFDATLRYMG----------ERKAFGQSLD--QFQALQFRLAEQ- 286

Query: 381 DEAKSRS-----EEAAYARIMAPITKYWCCKMAPAVIAEAM-----ECI---GGSGYIEE 427
            E K +S      +AA+    A       C MA   + +A      +C+   GG GY+ +
Sbjct: 287 -EVKLQSARIFLRQAAWKLDHAAPDATKFCAMAKLYVTDAAFDVANQCLQLHGGYGYLAD 345

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             I +  R+   + IL G+   M L
Sbjct: 346 YGIEKLVRDLRVHQILEGTNEIMRL 370


>gi|163839283|ref|YP_001623688.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162952759|gb|ABY22274.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 398

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 36/286 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V L+ +      W P I+S          M+K       GLTE  GG+ +A  T    K 
Sbjct: 115 VELLASEEQKALWLPDIYS----------MKKIG---AFGLTEPLGGSYVAGGTRTTAKR 161

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               + L+G K W  ++  SD  ++ A+   + +V  F+V     D +  G    +++NK
Sbjct: 162 EGDNWVLNGAKRWIGNATFSDWVVIYARDVDDNQVKAFMV-----DTATPGYKATKIENK 216

Query: 279 IGNRS--NATVELE---FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           I  RS  NA + LE    SN F    G+    T  V  +K+   L  A  +V     +  
Sbjct: 217 ISLRSVQNADITLENLVISNDFKLEHGNSFRDTNKV--LKV-TRLAVAWQAVGQQMAAFD 273

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R   G  L    +++  +  I  +  A+  +  RL+   D  +++ E++A A
Sbjct: 274 VARRYAVERVQFGRPLASFQLIQDQLVQILGNTVASMGMMVRLSQLEDLGQAKDEQSALA 333

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +       +   +M  +V A     +GG+G + +  +A+ + ++ A
Sbjct: 334 K------AFTSARMRESV-AIGRSILGGNGIVTDYEMAKIFSDAEA 372


>gi|40889734|pdb|1UDY|A Chain A, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889735|pdb|1UDY|B Chain B, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889736|pdb|1UDY|C Chain C, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889737|pdb|1UDY|D Chain D, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
          Length = 396

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 135 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV TG    
Sbjct: 194 FTGFIVEADTP-GVQIGRKEINMGQRC--------SDTRGIVFEDVRVPKENVLTGEGAG 244

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G +L +   +   +AD+A+ 
Sbjct: 245 FKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMK 304

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 305 VELARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAVQVFGGNGFN 357

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 358 TEYPVEKLMRDAKIYQIYEGT 378


>gi|299066778|emb|CBJ37972.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 622

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 67/318 (21%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIATRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L       G  N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGVKGISLFIVPKFLVGADGALGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                     +   G+L+G+    L      + + +I + + + ++  +G       A+ 
Sbjct: 284 RPKGPDGQPRAGAIGYLVGEPHRGLACMFHMMNEARIGVGMGATMLGYTGY----LHALD 339

Query: 338 YARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           YAR R     I             ++D   ++R +      +  A  L+   A   DE +
Sbjct: 340 YARNRPQGRPIGPAGKDAASPQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEER 399

Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++  A A       I+ PI K W  +      + A++  GG GY  E ++ + YR++ 
Sbjct: 400 GETDADARATLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNR 459

Query: 439 ANSILLGSGNAMVLDVLN 456
            N I  G+     LD+L 
Sbjct: 460 LNPIHEGTHGIQGLDLLG 477


>gi|296162919|ref|ZP_06845698.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295886830|gb|EFG66669.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 402

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)

Query: 186 TNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243
           T   P      AI    L+E   G+D+AA+T   ++  D  Y L G K W  +  ++D +
Sbjct: 121 TRYLPRVANGTAIAAFALSEPEAGSDVAAMTLSAREDGDA-YVLDGDKTWISNGGIADFY 179

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+     G   +   + D    GL      + I    +    L F+   G  +    
Sbjct: 180 VVFARTGEAPGARGISAFIVDADTPGLEIAERIDVIA--PHPLARLHFA---GARVPRSQ 234

Query: 304 VSTGPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E  K+      +     A  S+   R ++AE +  A  R + G  L D  + + 
Sbjct: 235 MLGAPGEGFKLAMRTLDIFRTSVAAASLGFARHAMAEGLARAASRKMFGQTLGDFQLTQA 294

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +AL I ++  L +R A   D+ ++ + EAA A       K+   + A  VI  A++
Sbjct: 295 KLAQMALTIDSSALLVYRAAWLRDQGENVTREAAMA-------KWHASEGAQQVIDAAVQ 347

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG G     ++   YRE  A  I  G+
Sbjct: 348 LYGGMGVQSGTAVEMLYREIRALRIYEGA 376


>gi|15805578|ref|NP_294274.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6458244|gb|AAF10130.1|AE001913_4 glutaryl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 414

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 42/289 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQK 220
           +AL +     K W P +            M+K       GLTE  GG+ ++  + +  ++
Sbjct: 131 IALGSDEEQKKRWLPDMLD----------MKKIGA---FGLTEPEGGSQVSEGMRTTCRR 177

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             DG + L+G K W  +S  SD  ++ A+ E    V  F+V    E G+P G   ++++ 
Sbjct: 178 DGDG-WVLNGEKKWIGNSTFSDFTVIWARDEETNEVRGFVV----EAGTP-GYDVEKIQG 231

Query: 278 KIGNR--SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           KI  R   N  + L+        + D N   +    E +  ++ L  A ++  G+  ++ 
Sbjct: 232 KIALRMVENGHITLKDCR-----VADANRLQAVQGWETVSQVLKLTRAGVAWQGVGCAMG 286

Query: 334 E---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A+ Y + R   G  + +  +++  +  +  D+ A   +  RL++  DE +     A
Sbjct: 287 AYELALAYTQTRKQFGKRIGEFQLIQSHLTHMLADVTAMLGMVMRLSHIADEGRMDDAHA 346

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           A A++         C+    V+A A E  GG+G + E  +A+H+ ++ A
Sbjct: 347 ALAKVHTAAR----CR---EVVARAREVFGGNGILLEHGVAKHFCDTEA 388


>gi|292655527|ref|YP_003535424.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370788|gb|ADE03015.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 41/276 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246
           P+ +     GL ++E + G+D+A + +  +K  DG Y L+G K+++ + +   ++ +   
Sbjct: 116 PVAENEQLSGLAVSEPQTGSDMAGMETAAEKTDDG-YVLNGEKYWVGNAVEADWLTVYAK 174

Query: 247 -AQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295
            A  + R      F+VP        +G   + +  K+G R++    + F        N  
Sbjct: 175 TADTDDRYSNYSMFIVPT-----DTSGYEAEHIPEKMGMRASKQGHIVFDDCEVPEENLI 229

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
           G   G   +         +  + +   + V G  + LA     E   +   R   G  + 
Sbjct: 230 GTEGGGFYM---------LADFFNHGRVIVGGHSLGLAAAAIEETWEFVHDRQAFGRSVS 280

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  +AD+ ++  AA AL++R A    E  +  E+A +    A  TK    + A  
Sbjct: 281 EFQAVQHILADMRMEFEAARALNWRAA----EKVANGEDAGF---WAAATKTKSTETAVD 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V    M+  GG   + E  I+R YR++    I  G+
Sbjct: 334 VAERGMQLHGGRSVLNEYKISRVYRDARIPVIYEGA 369


>gi|294936869|ref|XP_002781891.1| Isovaleryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC
           50983]
 gi|239893007|gb|EER13686.1| Isovaleryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC
           50983]
          Length = 200

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           Q++ +K G R+++T EL F         L+G+L     P+     +  +  A MS+   R
Sbjct: 5   QKIGDKCGMRASSTAELIFEGVKIPRENLVGELGKGVVPMMRNLEIERVTLAAMSLGIAR 64

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L   + Y + R   G  L +   ++R  A+     AAA A  + +A        R + 
Sbjct: 65  RCLDVMLTYTQERKSFGKPLAEFGQIQRHFAESYAQWAAARAYVYMVAGQL-----RLDT 119

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A+ +R  +   K +   MA  V   AM+C+GG GY+ E  + R +R+  A  + +G G 
Sbjct: 120 ASGSRSDSDGVKLFATTMAKDVADRAMQCLGGYGYVGEYVVERLWRD--AKLLEIGGGT 176


>gi|332558578|ref|ZP_08412900.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332276290|gb|EGJ21605.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 379

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 36/273 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++     +G Y LSG K F+S    SDA++ + +  G  G   +  
Sbjct: 124 LTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSDAYLTMCRTGG-AGPKGIST 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
           LL      GL +  L++K+G R+  T +++F      +  DL V     E+ +   Y   
Sbjct: 182 LLVPAETPGLSFGGLEDKMGWRAQETRQVQFDEC--LVPTDLLVG----EEGRGFAYAMA 235

Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD   ++++   +  A+A   A R +++          +R      LD     AL FRL
Sbjct: 236 GLDGGRLNIAATALGGAQAAFDATRAYMA----------ERKAFGQRLD--GFQALQFRL 283

Query: 377 AN---SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE-----AMECI---GGSGYI 425
           A       +A+    +AA+            C MA   + +     A +C+   GG GY+
Sbjct: 284 AEMEVKLQQARIFLRQAAWKLDQGAPDATKFCAMAKLAVTDSAFGVANQCLQLHGGYGYL 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  I +  R+   + IL G+   M + V   L
Sbjct: 344 ADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|319950206|ref|ZP_08024133.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319436110|gb|EFV91303.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 396

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 26/260 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIML 246
            P+    V     LTE   G+  A +T++   + DG  + + G K F++ +P++  F++ 
Sbjct: 118 GPIASGEVIASFALTEDGAGSSPAGLTTR--AVRDGADWVIDGTKRFITNAPLAGLFVVF 175

Query: 247 AQV-----EGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----G 296
           A+      +G  +  FLVP         G+       K+G     T E+ F         
Sbjct: 176 ARTRPADADGTGIAVFLVP-----ADTPGVTVGPKDKKMGQEGAWTAEVSFQGVRVPHDA 230

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            + GD +              +  A ++V   + +L E++ +A      G ++ +  +++
Sbjct: 231 LVGGDEDAGYRAAMTSLARGRVHIAALAVGAAQRALDESLAHATTATQGGTVIGEFQLVQ 290

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +ADI + + A  A+    A  +   + R       RI     K +C +M       A+
Sbjct: 291 AMLADIQVGVMAGRAMVREAAAKYHSGEDR-------RIAPSAAKLYCTEMVGRAADLAV 343

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GGSGYI    + R YR+
Sbjct: 344 QIHGGSGYIRGVPVERIYRD 363


>gi|229080262|ref|ZP_04212789.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock4-2]
 gi|228703157|gb|EEL55616.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           Rock4-2]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 110/238 (46%), Gaps = 27/238 (11%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+K     + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         ++  G V+   +  ++++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDIKGGKVKQKGVGWVLHIPA 245

Query: 321 AIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             + ++       V  AE+       H S  +L   P ++R + ++ L++  A    +++
Sbjct: 246 CYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PNVRRLVGELELELMQARVFLYQI 301

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A  +DEA+ +   +  A ++A   KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 302 AKKYDEAEDKL--SLQAELVA--VKYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|72161914|ref|YP_289571.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915646|gb|AAZ55548.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 161/379 (42%), Gaps = 42/379 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH------ 150
           VEF  A    LRR  H   H + W+   E +V ++  +      +L   + A +      
Sbjct: 11  VEFRDAVREFLRR--HAVPHYARWEA--EGIVDRELWRQAGRAGFLGTAIPAAYGGGGEP 66

Query: 151 ------LMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGL 200
                 +++     A M++L +   VH D    +   + S E        +    +   +
Sbjct: 67  DFRYNAILTEECARAGMLSLSSGFGVHNDVVTPYLLSLASEEQKQRWLPGLCSGDLVTAI 126

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV---GCF 256
            +TE   G+D+ A+ +   +  D  Y L+G K F+++ + +D  I++A+ +      G  
Sbjct: 127 AMTEPGAGSDLKAVRTTAVRDGDS-YVLNGTKTFITNGIHADLVIVVAKTDPSAQARGIS 185

Query: 257 LVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
           LV  ++E G P    ++R +N  K+G  +  T EL F +       LLG+ N   G +  
Sbjct: 186 LV--VVERGMPG---FRRGRNLAKVGLHAQDTAELVFEDVRVPAANLLGEENQGFGYLMR 240

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+++V+  R ++   I Y R R   G  +      K  +A++A ++  A  
Sbjct: 241 NLPQERLSIAVIAVAAARAAVEWTIRYCRERTAFGQEIGRFQHNKFQLAEMATEVDIAQT 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              R   + +  +    +AA A       K+W  ++        ++  GG GY++E  I+
Sbjct: 301 YVDRAVLAHNAGRLSPVDAAKA-------KWWTTELLKRTADTCLQLHGGYGYMDEYPIS 353

Query: 432 RHYRESPANSILLGSGNAM 450
           R +R++  ++I  G+   M
Sbjct: 354 RLWRDARVHTIFGGTTEIM 372


>gi|297690739|ref|XP_002822766.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           3 [Pongo abelii]
          Length = 365

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 38/259 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y LSG K F+S +  SD ++++ +  G     + C 
Sbjct: 83  LTEPGSGSDAASLLTSAKKQGDH-YILSGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 141

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 142 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 191

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 192 ----AVKGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMAT 247

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 248 RLVAAR-LMIR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 301

Query: 425 IEERSIARHYRESPANSIL 443
           +++ ++ ++ R+S  + IL
Sbjct: 302 LKDYAVQQYVRDSRVHQIL 320


>gi|156365642|ref|XP_001626753.1| predicted protein [Nematostella vectensis]
 gi|156213641|gb|EDO34653.1| predicted protein [Nematostella vectensis]
          Length = 392

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 35/262 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           +TE   G+D+A I ++ +K  D  Y ++G K W  +  +++ + +LA+ +     G    
Sbjct: 129 VTEPTAGSDVAGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTDSSASAGKGFT 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304
             +++  +P G+   R +  +G R++ T  + F +               F   +G  + 
Sbjct: 188 GFIVDADTP-GVTPGRKEQNMGQRASDTRGITFEDVVVPKENVLGAEGIGFKIAMGAFDK 246

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +  PV           A  +V   R +L EA  Y+  R   G  + +   ++  +AD+A+
Sbjct: 247 TRPPV-----------ASSAVGLARRALEEATKYSMERKTMGKYICEHQAVQFLLADMAI 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A   + R A   D+ +  +  A+ A+ +A      C           +   GG+G+
Sbjct: 296 GVETARLATQRSAWEIDQGRRNTYYASIAKCLAGDVANKCTTRWT-----DLGIFGGNGF 350

Query: 425 IEERSIARHYRESPANSILLGS 446
            +E  + +  R++    I  G+
Sbjct: 351 NQEYPVEKLMRDAKIFQIYEGT 372


>gi|297616478|ref|YP_003701637.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144315|gb|ADI01072.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 388

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 31/259 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIML--AQVEGR-VG 254
           LTE   G+D A+I  + +   D  + ++G K F++    +     F+    +Q  G+ + 
Sbjct: 131 LTEPNAGSDAASIRCRAEDAGDH-FIVNGSKIFITNGGYATTYCTFVKTDPSQPPGKGIT 189

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VSTG 307
           C ++    E  +P G    +   K+G   + T EL F N       +LG++N    V+ G
Sbjct: 190 CLII----EKDTP-GFSISKPVEKMGMNGSPTCELYFDNVKVPKENVLGEVNNGFEVAMG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++  +I I    A   +     +L   ++Y + R   G  L     ++  +AD+A  + 
Sbjct: 245 LLDGGRITI----AAQGLGIGEGALEYTVNYIKERKQFGRPLAANQGVQFMVADMATALE 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R A   D     S+EA+ A+  A  T    C          ++ +GG GY +E
Sbjct: 301 AAQLLVYRAAWLKDNKLPHSKEASMAKKFATDTSMEVC-------TNCVQLMGGYGYCKE 353

Query: 428 RSIARHYRESPANSILLGS 446
             + R  R+     I  GS
Sbjct: 354 FPVERMMRDVKVTQIYEGS 372


>gi|254524202|ref|ZP_05136257.1| acyl-coa dehydrogenase family member 8 [Stenotrophomonas sp. SKA14]
 gi|219721793|gb|EED40318.1| acyl-coa dehydrogenase family member 8 [Stenotrophomonas sp. SKA14]
          Length = 388

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ +   +  D  + L+G K F+S   +   +++    G  G   V  +
Sbjct: 128 LTEPGAGSDAASLKTTAVRDGD-HFVLNGSKAFISGAGATELLVVMARTGGAGAGGVSAI 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKI 314
                  G+ + R + K+G  S  T  + F N         G   G   ++   ++  +I
Sbjct: 187 AVPADLPGVSFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGGGFKLAMKGLDGGRI 246

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+   + +L  A  Y   R   G  L +   ++  +AD+A+++ AA  +  
Sbjct: 247 NI----AACSLGAAQGALDAARRYMGERRQFGKALAEFQALQFKLADMAIELVAARQMVH 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D        A  A +   + K +       V  EA++  GG GYI E  I R  
Sbjct: 303 TAARKLDAG------AGDANVWCAMAKRFATDAGFNVCNEALQIHGGYGYIREYPIERLL 356

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 357 RDCRVHQILEGTNEIM 372


>gi|71065365|ref|YP_264092.1| putative glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038350|gb|AAZ18658.1| putative glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 394

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 20/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D +++ ++ + ++ G Y L+G+K W  +SP+SD F++ A
Sbjct: 127 PKLATGEYVGCFGLTEPDSGSDPSSMLTRARAVAGG-YELTGNKMWITNSPISDVFVVWA 185

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + + G +  F++     D    GL   +++ K   R++ T E+     F        D+ 
Sbjct: 186 KDDAGDIRGFIL-----DKGMKGLSAPKIEGKFSLRASVTGEIVMDKVFVPEANAFPDIR 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP   +    Y   A  S+         +  Y   R   G  L    +++  +A++ 
Sbjct: 241 GLKGPFGCLNKARY-GIAWGSMGAAEFCWKASRQYTLDRKQFGRPLAATQLVQLKLANMQ 299

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I      + R+    DE  +  E       M  + K   C  A  +   A +  GG+G
Sbjct: 300 TEITLGLQAALRVGRLMDEDNAAPE-------MISLIKRNNCGKALEIARIARDMHGGNG 352

Query: 424 YIEERSIARH 433
             +E  I RH
Sbjct: 353 ISDEFHIIRH 362


>gi|312602732|ref|YP_004022577.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312170046|emb|CBW77058.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 421

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 19/265 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P  D  ++  + +   G   +
Sbjct: 157 LAMSEPNAGSDVVSMRLRADKKRD-RYVLNGTKTWITNGPDCDTLVVYGKTDLEAGARGM 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310
              + +    G    +  +K+G R + T EL F        N  G + G + V  +G   
Sbjct: 216 TAFIVEKGTKGFSVAQKLDKLGMRGSHTGELVFEDVEVPHENVLGQVGGGVKVLMSGLDY 275

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L    + IM     R  L   + Y   R      + +  +++  +AD+   + A  
Sbjct: 276 ERAVLAGGPTGIM-----RACLDAVVPYIHDRKQFSQSIGEFQLIQGKVADMYTTLQACR 330

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + + +  D  K  SE     R        +  + A  +  EA++ +GG+GY+    +
Sbjct: 331 AYLYAMGSQLD--KLGSEHVRQMRKDCAGVILYTAEKATWMAGEAIQILGGNGYLNAFPV 388

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
            R +R++    I  G+G + +  +L
Sbjct: 389 GRLWRDAKLYEI--GAGTSEIRRIL 411


>gi|320007292|gb|ADW02142.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 22/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +  +   D  + L+G K F+S+  ++D  I++A+     G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTAAEDKGDH-WLLNGSKTFISNGILADLVIVVAKTSPEGGAKGL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R  +KIG +S  T EL F +       LLG+L+ +      + ++
Sbjct: 183 SLLVVERGAEGFERGRNLDKIGQKSQDTAELFFDDVRVPKENLLGELDGAF-----VHLM 237

Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    M ++   ++ AE +      Y + R   G  L     ++  IA++A + A   
Sbjct: 238 TNLAQERMGIAVAGIAAAEHLLEITTRYVKEREAFGRPLSKLQHIRFEIAEMATECAVTR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                     D       E     + A + K+W  ++   V    ++  GG GY+ E  +
Sbjct: 298 TF-------LDRCIVDHSEGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMTEYRV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           A+ Y +    +I  G+   M
Sbjct: 351 AKAYTDGRIQTIYGGTTEIM 370


>gi|193078459|gb|ABO13450.2| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 390

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 34/288 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRTGFTKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG      G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPKENLLG--MEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             G  +      +  +A++  +I    T L   +    DE  S    AA         KY
Sbjct: 283 AFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAA--------AKY 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 335 KISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIM 382


>gi|111222561|ref|YP_713355.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111150093|emb|CAJ61788.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 393

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 30/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGC 255
           + +TE   G+D+  + +   +  D  Y ++G K F+S+  ++D  ++ A+    +G  G 
Sbjct: 136 IAMTEPVAGSDLRGMRTTAVRDGDH-YVVNGSKTFISNGILADLVVLCAKTTRADGEQGI 194

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+  ++E  +P G    R  +K+G RS  T EL F++       LLG+ N      E +
Sbjct: 195 SLI--VVERDTP-GFERGRRLDKVGARSQDTAELFFTDARVPVANLLGEEN------EGL 245

Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             L+       L  AI S+  +  +L     Y R R   G  +      +  +AD+    
Sbjct: 246 HYLMRNLAKERLSIAISSIQNVFRALELTTAYVRERRAFGKPIGSFQNTRFVLADLQARA 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A +       +    +    EAA A++ A        ++  A +   ++  GG G++ 
Sbjct: 306 WMARSFVDACLAALVVGELTGVEAAAAKLCA-------TELEDAAVDAGVQLHGGYGWMN 358

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR YR+S  + IL GS   M
Sbjct: 359 EYPIARMYRDSRISRILGGSNEIM 382


>gi|300693094|ref|YP_003749067.1| acyl-CoA dehydrogenase oxidoreductase protein (abmd) [Ralstonia
           solanacearum PSI07]
 gi|299075131|emb|CBJ34413.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum PSI07]
          Length = 398

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 18/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    +   D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 130 FALSEPDAGSDVAAMACAARADGDS-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + D    G       + I    +    L F++     G  +G      G    M+ L
Sbjct: 189 SAFIVDAGTPGFEIAERIDVIA--PHPLARLRFTDCRIPAGQRVG--AAGEGFKVAMRTL 244

Query: 316 -IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            ++  S   +  G  R +L EA+  A  R +  G+L D  + +  +A +A  I +A  L+
Sbjct: 245 DVFRTSVAAAALGFARRALDEALARATTRRMFNGVLADFQLTQAKLAQMATAIDSAALLT 304

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D+ ++ + EAA A++ A        + A  VI  A++  GG G + ++ + R 
Sbjct: 305 YRAAWQRDQGRTVTREAAMAKMTA-------TENAQQVIDAAVQMWGGLGVVSDQPVERL 357

Query: 434 YRESPANSILLGS 446
           YRE  A  I  G+
Sbjct: 358 YREIRALRIYEGA 370


>gi|296282328|ref|ZP_06860326.1| glutaryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 391

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 32/268 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D A + +  +K  D  Y +SG K W  +
Sbjct: 112 FGSEEQKKKYLPGLASGELIGCFGLTEPDAGSDPAGMKTVAKKDGDD-YVISGSKTWISN 170

Query: 237 SPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---E 290
           SP +D F++ A+ E   G +  F++ + +E     GL   +++ KI  R++ T  +   E
Sbjct: 171 SPFADVFVVWAKSEEHGGAIRGFVLEKGME-----GLSAPKIEGKISLRASTTGMIMMDE 225

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
                  +  ++    GP         L+ A   +S   +  AE     A  Y   R   
Sbjct: 226 VRVPASAMFPEVQGLKGPFN------CLNRARYGISWGAMGAAEFCMDAAKQYGLDRQQF 279

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L  + + +  +AD+  +IA     S R+    DE         ++  M  I K    
Sbjct: 280 GVPLASKQLYQLKLADMLTEIALGLQASLRVGRLMDEGN-------WSPDMVSIVKRNNV 332

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +   + +  GG+G  EE  + RH
Sbjct: 333 GKALNIARVSRDMHGGNGISEEYQVIRH 360


>gi|159036333|ref|YP_001535586.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915168|gb|ABV96595.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 400

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 31/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ-------VEGR 252
           ++E   G+D++AI S+   + DG  + L+G K W  +   +     L +       V G 
Sbjct: 129 MSEPECGSDVSAIKSRA--VRDGADFVLNGQKMWLTNGAYASVVATLVKTDTGADSVYGN 186

Query: 253 VGCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVS 305
           +  FLV +  E G   +  GL       K+G +   T E+            L G+  V 
Sbjct: 187 MSTFLVEK--EPGFGETAPGLTIPAKIEKMGYKGVETTEMILDGVTVPASAVLGGEGQVG 244

Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G  + M  I +   +      G+ +   E A  YA++R   G  L     +   +A++ 
Sbjct: 245 RGFYQMMDGIEVGRVNVAARACGISIRAFELAAAYAQQRRTFGQPLAKHQAVAFKLAEMG 304

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA AL    A   D  +    EA  A+++A     +C +    V+ EA    GG G
Sbjct: 305 TKIEAAHALMVNAARLKDAGQRNDVEAGMAKLLA---SEYCAE----VVQEAFRIHGGYG 357

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  I R  RE+P   +L+G G + +
Sbjct: 358 YSKEYEIERLMREAP--FLLIGEGTSEI 383


>gi|119477138|ref|ZP_01617374.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119449501|gb|EAW30739.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 387

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 28/255 (10%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           +   +  +E  GGTD+        K  DG + ++G K W   + ++D    +A+    VG
Sbjct: 121 IKTAMSFSEPSGGTDLLGGMKTTAKKVDGGWIINGEKIWSTGASVADYLFTMARSSSDVG 180

Query: 255 -------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
                   F +P         G+       K+G R+ ++  + F + F    FLLG    
Sbjct: 181 RRSDGISIFFIP-----ADSEGITITEFP-KLGMRAISSCSIIFDDVFVSDEFLLG--KE 232

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G  E  K L    L +A   +  +   L +A+ + + RH  G  +     ++  IADI
Sbjct: 233 GNGWYESTKTLNNERLINAATCLGMLDGVLEDAVEHMKSRHAFGKPIGQFQALQHYIADI 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++       L    A      ++ + E+A    MA +T   C +         ++ +GG 
Sbjct: 293 SMWQMQGELLVLHTAT----LQANNIESALESNMAKVT---CSENVGKAADLGIQILGGM 345

Query: 423 GYIEERSIARHYRES 437
           GY  E  + R++R+S
Sbjct: 346 GYSAETDMQRYWRDS 360


>gi|103488356|ref|YP_617917.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978433|gb|ABF54584.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 400

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 26/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           +  E    N  P   +   +G  GLTE   G+D A + ++ +KI  G Y L G K W  +
Sbjct: 120 YGSEEQKRNFLPGLTSGELVGCFGLTEPDAGSDPAGMRTRAEKIEGG-YRLKGAKMWITN 178

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           SP++D F++ A+ +   G  +   LLE G   GL   +++ K+  R++ T E+       
Sbjct: 179 SPIADVFVVWAKSDAHGGA-IRGFLLEKGM-KGLSAPKIEGKVSLRASVTGEIVMDGVEV 236

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
               LL  ++   GP         L+ A   +    +  AE     A +Y   R   G  
Sbjct: 237 GEDALLPHVSGLKGP------FGCLNRARYGIGWGAMGAAEFCYEAARNYTLERKQFGRP 290

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    +++  +A++  +IA  T  + R+    DE          A  M    K   C  A
Sbjct: 291 LAANQIVQLKLANMLTEIALGTQAALRVGRLIDEGH-------LAPDMISFLKRNNCGKA 343

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +   A +  GG+G   +  + RH
Sbjct: 344 LDIARTARDMHGGNGISADYHVIRH 368


>gi|294649711|ref|ZP_06727119.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824390|gb|EFF83185.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 53/316 (16%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L+SP + +      + T    + W PK+ + E             V   + +TE   G+
Sbjct: 91  ELVSPYLQN------IGTEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ AI +Q   + +  Y ++G K F+S+ + +D  +++A+ + +     +  LL D +  
Sbjct: 132 DLQAIRTQA-ILENDQYRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDATLE 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKI 314
           G+   R   KIG  +  T EL F +               F +L+ +L     P E + I
Sbjct: 191 GVKKGRSLQKIGLHAQDTAELFFDDVYVPASQRLGEEGQGFAYLMQEL-----PRERLSI 245

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 ++M++  +  ++     Y   R   G  L      +  +A+  +   AA A   
Sbjct: 246 ------SMMALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVD 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A  + + +    + A  +    IT   C      VI + ++  GG GY++E  I+R +
Sbjct: 300 QCAALYQQHQLNVTQVAALKCF--ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFF 352

Query: 435 RESPANSILLGSGNAM 450
            ++    I  G+   M
Sbjct: 353 VDARVQKIYGGTNEIM 368


>gi|255767530|ref|NP_390295.2| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321311896|ref|YP_004204183.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|251757487|sp|P45857|ACDB_BACSU RecName: Full=Acyl-CoA dehydrogenase
 gi|225185158|emb|CAB14346.2| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018170|gb|ADV93156.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 40/279 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL 257
           LTE   G+D  ++ +   K  +G Y L+G K F+++   +D +I  A     +GR G  +
Sbjct: 123 LTEPHSGSDAGSLRTTAIK-KNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
              ++E  +P G    + + K+G   + T EL F N               F   + +LN
Sbjct: 180 SAFIVEKNTP-GFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLN 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V             +  A  ++     +L  A+ YA++R   G  +     +   +AD+A
Sbjct: 239 VGR-----------IGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L +  A+  +   +  +EA+ A       K +    A     +A++  GG G
Sbjct: 288 TRAEAARHLVYHAADLHNRGLNCGKEASMA-------KQFASDAAVKAALDAVQIYGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           Y+++  + R  R++    I  G+     L +   L  GT
Sbjct: 341 YMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLGGT 379


>gi|187921789|ref|YP_001890821.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187720227|gb|ACD21450.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 402

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    ++  D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 136 FALSEPEAGSDVAAMALSAREDGD-TYVLDGDKTWISNGGIADFYVVFARTGEAPGARGI 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---- 314
              + D    GL      + I    +    L F+   G  +    +   P E  K+    
Sbjct: 195 SAFIVDADTPGLEIAERIDVIA--PHPLARLHFA---GARVPRSQMLGAPGEGFKLAMRT 249

Query: 315 --LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +     A  S+   R ++AE I  A  R + G  L D  + +  +A +AL I ++  L
Sbjct: 250 LDIFRTSVAAASLGFARHAMAEGISRAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALL 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A   D+ ++ + EAA A       K+   + A  VI  A++  GG G     ++  
Sbjct: 310 VYRAAWLRDQGENVTREAAMA-------KWHASEGAQQVIDAAVQLFGGMGVQSGTAVEM 362

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 363 LYREIRALRIYEGA 376


>gi|313904210|ref|ZP_07837589.1| Butyryl-CoA dehydrogenase [Eubacterium cellulosolvens 6]
 gi|313471012|gb|EFR66335.1| Butyryl-CoA dehydrogenase [Eubacterium cellulosolvens 6]
          Length = 390

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 126/284 (44%), Gaps = 40/284 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSS-PMSDAFIMLA----- 247
            GLTE   GTD     +QGQ+    +      + L+G K F+++  ++D +I++A     
Sbjct: 123 FGLTEPGAGTD-----AQGQQTKAVLDENTNEWVLNGSKCFITNGKVADVYIIIAVTGIV 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  GR    +   ++E  +P G  +   + K+G R ++T EL F +     +   N+   
Sbjct: 178 EKRGRKFKEISAFIVEKNTP-GFTFGAKEKKMGIRGSSTYELIFQDC---RIPKDNMLGA 233

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
             +   I ++ LD   + ++   + +AE      + Y + R   G  +      +  +A+
Sbjct: 234 KGKGFGIAMHTLDGGRIGIATQALGIAEGALDLTVAYTKERKQFGRSISAFQNTQFQLAN 293

Query: 362 IALDIAAATALSFRLANS-----FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +   + AA  + ++ A +     F +A +   EAA A++ A  T       A  V  + +
Sbjct: 294 MKAHVDAAQLMVYKAACAKDAVGFAQASTYGLEAAEAKLYAAET-------AMDVTTKCV 346

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLE 459
           +  GG GYI E  + R  R++    I  G+   M + +  NLL+
Sbjct: 347 QLFGGYGYIREYDVERMMRDAKITEIYEGTAEVMRMVISANLLK 390


>gi|88706259|ref|ZP_01103965.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88699410|gb|EAQ96523.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 395

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 30/255 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D   + ++ + + DG Y +SG K W  +SP++D F++ A
Sbjct: 129 PKLATGEWIGCFGLTEPDYGSDPGGMVTRARSV-DGGYRISGAKMWISNSPVADVFVVWA 187

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           +  +G +  F    +LE G  +GL   +++ K+  R++ T E+     F     LL  ++
Sbjct: 188 KTDDGLIRGF----ILEKGM-DGLSAPKIEGKLALRASITGEIVMDEVFVAEEQLLPKVH 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
              GP         L++A   ++   +  AE     A+ Y   R   G  L    +++  
Sbjct: 243 GLKGPFG------CLNNARYGIAWGALGAAETCWHAALDYTLERKQFGKPLAANQLVQLK 296

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +IA       R     D         A +  +  + K   C  A  +  +A + 
Sbjct: 297 LADMQTEIALGLQGCARAGQLMD-------AGAVSPDLISLIKRNSCGKALHIARQARDM 349

Query: 419 IGGSGYIEERSIARH 433
           +GG+G  ++  + RH
Sbjct: 350 LGGNGISDDYPVMRH 364


>gi|315445404|ref|YP_004078283.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263707|gb|ADU00449.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 403

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++   K+    Y ++G K ++++      I+    L + +GR  +
Sbjct: 133 MAITEPGFGSDSAAVSTTA-KLDGDEYVINGEKIYVTAGSRATHIVVWASLDKSKGRAAI 191

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGP 308
             F+VPR        G+  +RL++K+G +++ T  + F N       LLG  D+NV  G 
Sbjct: 192 KSFIVPR-----EHPGVTIERLEHKLGIKASDTAAIRFDNVRIPRENLLGSPDINVEKGF 246

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIAD---- 361
              M+     D+    V+GM V +A  A+   R+     GI I  D+P   ++ A     
Sbjct: 247 AGVMET---FDNTRPVVAGMAVGVARAALEELRKILTDAGIEISYDKPAHAQSAAAAEFL 303

Query: 362 -IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  +   L+ R A   D     S+EA+  +  A        ++A  +  + +E  G
Sbjct: 304 RMEADWESGYLLTLRSAWQADNRIPNSKEASMGKAKA-------ARVASDITLKTVELAG 356

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +GY E+  + +  R+S    I  G+
Sbjct: 357 TTGYSEQALLEKWARDSKILDIFEGT 382


>gi|239941763|ref|ZP_04693700.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239988223|ref|ZP_04708887.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291445208|ref|ZP_06584598.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291348155|gb|EFE75059.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 385

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 119 PLAQGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+   N       ++G+    
Sbjct: 178 TDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEG-- 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   +A          K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYAAA-----AKSERGDADLT-FQGAAAKCFASDVAMEVTTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|255532223|ref|YP_003092595.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255345207|gb|ACU04533.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 396

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 19/239 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G++ + + S  +   D  Y L+G K W  ++P +D  ++ A+ E G++   +
Sbjct: 140 FGLTEPDHGSNPSGMVSNIKDKGDH-YLLNGAKMWISNAPFADIAVVWAKDESGKIRGMV 198

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       +  D+    GP+  +  
Sbjct: 199 VERGME-----GFTTPETHNKWSLRASATGELVFDNVKVPKANIFPDVTGLKGPLGCLNQ 253

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y   A  ++         A+ YA++R   G  +    + ++ +A++  +I  A  L +
Sbjct: 254 ARY-GIAWGALGAAMDCYDTALRYAKQREQFGKPIGGFQLQQKKLAEMITEITKAQLLVW 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RL     E ++  E+ + A       K    ++A  +   A + +GG G   E +I RH
Sbjct: 313 RLGVLKSENRATPEQISMA-------KRNSVEVALDIARNARQMLGGMGITGEYAIMRH 364


>gi|197105985|ref|YP_002131362.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479405|gb|ACG78933.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 381

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 45/259 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-------EG 251
             LTE   G+D A + ++  +  D  Y L+G K +++ +P +D   ++A+          
Sbjct: 119 FALTEPGSGSDSAGLVTRAVRDGDH-YVLNGSKRYITNAPTADLITVMARTHSDRLPKNA 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNV 304
            V  FLVP         G+       K+G     +       V +  +N  G + G    
Sbjct: 178 HVTAFLVP-----ADTPGVTIGPKDRKMGQAGAWSADVYLQDVRVPAANVLGGVEG---- 228

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    MK+L    L+     V   R  L EA+ YAR R   G  +    +++  +AD 
Sbjct: 229 -RGFATAMKVLDRGRLNVTAACVGQARRILHEALAYARERQQFGQAIAGFQLVQAMLADS 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA-----VIAEAME 417
             ++ AA ++    A  +D  +  S EA+            CCKM  A     +   A++
Sbjct: 288 QAELYAAESMLRDAARRYDAGQRISLEAS------------CCKMFAAEMVGRIADRAVQ 335

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG+GY+ +  + R YR+
Sbjct: 336 IHGGAGYMRDTPVERFYRD 354


>gi|195126955|ref|XP_002007934.1| GI12099 [Drosophila mojavensis]
 gi|193919543|gb|EDW18410.1| GI12099 [Drosophila mojavensis]
          Length = 581

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 132/311 (42%), Gaps = 45/311 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + PK+ S +             V     LTE   G+D  +I S+  K 
Sbjct: 116 ILLYGTPEQKAKYLPKVASEQ-------------VYAAFALTEPSSGSDANSIRSRAVKT 162

Query: 222 SDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +D   Y L+G K W  +  ++D   + AQ E           +V  F+V R     S  G
Sbjct: 163 ADNKYYILNGSKIWISNGGLADVMTVFAQTEQIDQKTGEKKDKVTAFIVER-----SFGG 217

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM----S 324
           +     + K+G +++ T E+ F +     +   NV     E  K+ +  L+S       +
Sbjct: 218 VTNGAPEKKMGIKASNTAEVYFEDV---KIPIENVLGKEGEGFKVAVNILNSGRFGMGAT 274

Query: 325 VSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +SG M+  +  A  +A  R   G  + +   ++  + ++ +   A  +++F ++ + D  
Sbjct: 275 LSGTMKKCIEIATAHANNRTQFGQKIKEFGTIQEKLVNMNILQYATESMAFMISQNMD-- 332

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S S++     +   I+K +  + A  V  EA++ +GG G+++E  + R  R+     I 
Sbjct: 333 -SGSQD---YHLETAISKVYASECAWYVADEAIQILGGMGFMKETGLERIMRDLRIFRIF 388

Query: 444 LGSGNAMVLDV 454
            G+   + L V
Sbjct: 389 EGTNEVLRLFV 399


>gi|315425652|dbj|BAJ47311.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--------V 249
           +GL +TEK  G+D+ +I +   K   G Y ++G K ++++      ++LA          
Sbjct: 114 MGLSITEKESGSDVLSIKTTAVK-QGGKYVINGEKMYVNNFDRATHMLLAARTTPLEHAA 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302
           +  +G  L    + D    GL +  L  K+G     T       VE++  N  G +    
Sbjct: 173 KKSLGLTL---FVLDMKAGGLSFSELP-KMGTNYFRTGVMRLENVEVDEENVVGEVDNGW 228

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +   +I+     A ++V     ++  A  YA  R V G  +     ++  +A +
Sbjct: 229 KALAHALNPDRIVY----AAVAVGSALFAIKTATSYASERKVFGKPIGAYQGIQFPLASL 284

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  AA  L+   A  FD    R E+A+ A  +A   KY+  ++    + +A++ +GG 
Sbjct: 285 YTETEAARLLTLDAAAKFD----RGEDASVAACLA---KYFASEVVFKAVGQAVQVLGGY 337

Query: 423 GYIEERSIARHYRE 436
           GY++E  + R  R+
Sbjct: 338 GYLKESGLERVLRD 351


>gi|158934049|emb|CAO98842.1| hypothetical protein [Stigmatella aurantiaca DW4/3-1]
          Length = 346

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 23/266 (8%)

Query: 184 DPTNKAPMQ---KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PM 239
           DP  +A      +     G  L+E   G        + +++  G + LSG K F+S    
Sbjct: 73  DPQQRAFFDAEFRRGAWFGNALSEPTSGNMFLMPYQEARRVEGG-WRLSGAKRFVSGCEH 131

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +   I  A  EG+ G FL+ +   D S   +  + + + +G R+  +  L   +TF  L 
Sbjct: 132 AQYLITNALCEGQPGFFLIDK---DAS---IHVEDIWDTMGMRATRSQLLHLQDTF--LP 183

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVMKR 357
               +   P +   I + L    +S+     +LA AI YA+ R +      L     ++ 
Sbjct: 184 DSRRLMLDPSQPNAIAMGL--PWISIGLAEAALAFAIGYAQERKLPPENKALAQMQWVQF 241

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A+A+++  + AA +L+ R A + D    R  +A   ++ A +      + A +V   A+E
Sbjct: 242 AVAEMSTRLEAARSLAIRGALATDR---REPDAPMLQMQAKMV---ANEAALSVATSALE 295

Query: 418 CIGGSGYIEERSIARHYRESPANSIL 443
             GGSGY+  R I R+ R++ +  ++
Sbjct: 296 LAGGSGYLRSRPIERYVRDAHSGPLM 321


>gi|86135732|ref|ZP_01054311.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826606|gb|EAQ46802.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 561

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W PKI S E  PT                TE   G
Sbjct: 256 GSLATRSEIAAELILCGGTDDQKEQWLPKIASAEILPTAV-------------FTEPNTG 302

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ A+ ++  K   G Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 303 SDLGALRTRAVKTETGDYEITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKT 362

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   E   P  G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 363 PGTDEAPFPTPGMTGGEIE-VLGYRGMKEYELGFD---GFAVKQANLLGGAEGKGFKQLM 418

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   V +A+     ++ YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 419 ETFESARIQTAARAVGVAQSALDISMQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMVAR 478

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 479 QLTYFSAWEKDHGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 531

Query: 431 AR 432
           +R
Sbjct: 532 SR 533


>gi|332663815|ref|YP_004446603.1| glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332629|gb|AEE49730.1| Glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 407

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 17/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G++   + +  +   D  Y L+G K W  +SP++D  ++ A+ E  +   + 
Sbjct: 151 FGLTEPDHGSNPNGMVTNIKDDGDA-YILNGAKMWITNSPLADVAVVWAKDESGI---VR 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++E G P G     +  K+  R++ T EL F +       LL ++    GP+  +   
Sbjct: 207 GVIVERGMP-GFSAPEIHGKLSLRASITGELVFEDVRVPKSNLLPNVQGMKGPLSCLSKA 265

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            Y   A  ++         A+ YA+ R+  G  +    + ++ +A++  +I  A  L++R
Sbjct: 266 RY-GIAWGAIGAAMDCYDSALRYAKERNQFGRPIAQFQLTQKKLAEMITEITKAQLLAWR 324

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L    ++ K+   + + A       K     MA  +  EA +  GG G   E  + RH
Sbjct: 325 LGTLANQGKATPGQISMA-------KRNNVNMALEIAREARQIHGGMGITNEYPVMRH 375


>gi|187934849|ref|YP_001885563.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187723002|gb|ACD24223.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 22/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A++      +    Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 123 FGLTEPVAGTD-ASMQKTTAVLEGDHYVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G      + K+G R+++T EL F N       LLG+     G       +
Sbjct: 182 SAFIVEKDFQGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIA-----M 236

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +AE      + Y + R   G  +      +  +A +     AA 
Sbjct: 237 ATLDGGRIGIAAQALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAK 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A + D+ +  +  AA A+++A        + A  V +  ++  GG GY  +  I
Sbjct: 297 LLVYQAACAKDDHEKYTHLAAMAKLIAS-------RNATNVTSRCLQLFGGYGYSSDYPI 349

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R  R++    I  G+    ++
Sbjct: 350 ERMMRDAKITEIYEGTSEVQMM 371


>gi|115375877|ref|ZP_01463127.1| acyl-CoA dehydrogenase, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310822451|ref|YP_003954809.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115367128|gb|EAU66113.1| acyl-CoA dehydrogenase, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309395523|gb|ADO72982.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 362

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 23/266 (8%)

Query: 184 DPTNKAPMQ---KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PM 239
           DP  +A      +     G  L+E   G        + +++  G + LSG K F+S    
Sbjct: 89  DPQQRAFFDAEFRRGAWFGNALSEPTSGNMFLMPYQEARRVEGG-WRLSGAKRFVSGCEH 147

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +   I  A  EG+ G FL+ +   D S   +  + + + +G R+  +  L   +TF  L 
Sbjct: 148 AQYLITNALCEGQPGFFLIDK---DAS---IHVEDIWDTMGMRATRSQLLHLQDTF--LP 199

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVMKR 357
               +   P +   I + L    +S+     +LA AI YA+ R +      L     ++ 
Sbjct: 200 DSRRLMLDPSQPNAIAMGL--PWISIGLAEAALAFAIGYAQERKLPPENKALAQMQWVQF 257

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           A+A+++  + AA +L+ R A + D    R  +A   ++ A +      + A +V   A+E
Sbjct: 258 AVAEMSTRLEAARSLAIRGALATDR---REPDAPMLQMQAKMV---ANEAALSVATSALE 311

Query: 418 CIGGSGYIEERSIARHYRESPANSIL 443
             GGSGY+  R I R+ R++ +  ++
Sbjct: 312 LAGGSGYLRSRPIERYVRDAHSGPLM 337


>gi|77459878|ref|YP_349385.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
 gi|77383881|gb|ABA75394.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 387

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 113/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  + L+G K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKRGD-RFVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G L G + V       
Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG    + +A     + Y   R   G  + +  +++  +AD+   +
Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +A + +  ++  ++AA   +       +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NASRAYLYAVAQACERNETTRKDAAGVIL-------YTAERATQMALDAIQILGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           E    R  R++    I  G+
Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370


>gi|7542837|gb|AAF63626.1| medium-chain acyl-CoA dehydrogenase [Homo sapiens]
          Length = 425

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 164 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 222

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 223 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 282 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 337

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +  A+ A+  A         +A  +  +A++ +GG+G+  E  
Sbjct: 338 RMSYQRAAWEVDSGRRNTYYASTAKAFAG-------DIANQLATDAVQILGGNGFNTEYP 390

Query: 430 IARHYRESPANSILLGSGNAMVLDV 454
           + +  R++    I  G+     L V
Sbjct: 391 VEKLMRDAKIYQIYEGTSQIQRLIV 415


>gi|83312330|ref|YP_422594.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947171|dbj|BAE52035.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 392

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 34/271 (12%)

Query: 178 IFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233
           IFS   +   K   P   T   IG  GLTE   G+D   + ++ +K+ DG Y L+G K W
Sbjct: 109 IFSYGTEEQKKKYLPRLATGEIIGCFGLTEPDAGSDPGGMRTRAKKV-DGGYLLTGSKMW 167

Query: 234 FLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +SP+SD  I+ A+    EG++  F+V + ++     G    +++ K+  R++ T E+ 
Sbjct: 168 ITNSPISDIAIVWAKSDAHEGKIKGFIVEKGIK-----GFTTPKIEGKLSLRASITGEIV 222

Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
               F     L+ + +   GP         L+ A   ++   +  AE   +A R+++   
Sbjct: 223 LDEAFVPDEALMPNASGLGGP------FGCLNKARYGIAWGVIGAAEFCWHAARQYMLDR 276

Query: 348 ILIDQPVMKRAI-----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
               +P+    I     A++  +I        R+    D       +  +A     + K 
Sbjct: 277 KQFGRPLAANQIPQLKLANMMTEITLGLQACVRVGRMMD-------DHTWAPEAVSLIKR 329

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             C  A  +   A +  GG+G  EE  + RH
Sbjct: 330 NNCGKALDIARMARDMHGGNGISEEFHVIRH 360


>gi|302534825|ref|ZP_07287167.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443720|gb|EFL15536.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 385

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +SD + ++A 
Sbjct: 119 PLAKGDAMFSYCLSEPDAGSDAAGMKTRAVRDGD-FWVLNGVKRWITNAGVSDYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 178 TDPEKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   ++          K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYSAA-----AKSERVDSDLT-FFGAAAKCFASDVAMEVTTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|301346414|ref|ZP_07227155.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511559|ref|ZP_07236796.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595606|ref|ZP_07240614.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB059]
          Length = 371

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHYRINGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+ + +     +  LL D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTDPQAKAKGISILLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGAIELTKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|49088532|gb|AAT51580.1| PA2015 [synthetic construct]
          Length = 388

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 115/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  ++ D  + L+G K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRVGD-RFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G       +K+G R + T EL F +     + + NV       +K+L+  
Sbjct: 187 TAFIVERDWKGFSRGPKLDKLGMRGSNTCELIFQDV---EVPEENVLGAVNGGVKVLMSG 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG  V + +A     + Y   R   G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GY  E    R
Sbjct: 304 LYAVAAACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYTNEFPTGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|110678692|ref|YP_681699.1| isobutyryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109454808|gb|ABG31013.1| isobutyryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 561

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 47/304 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P++ S E  PT          A+    TE   G
Sbjct: 257 GSLGTRSEIAAELIIAGGTQEQKEKWLPRLASAETLPT----------AV---FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  +  Y ++G+K W   +  ++   +LA+ +        +  FL  + 
Sbjct: 304 SDLGSLRTRAVKDGEN-YTITGNKTWITHATRTNVMTLLARTDPDTTDYRGLSMFLAEKT 362

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
             +D +P   +G+    ++  +G R     EL F N   F +   N+  G  E+ K    
Sbjct: 363 PGDDENPFPTDGMTGGEIE-VLGYRGMKEYELAFDN---FEVKGENLLGG--EEGKGFKQ 416

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++   +SA +  +   V +A+     A+ YA+ R   G  LI+ P +   +A +A++I  
Sbjct: 417 LMETFESARIQTAARAVGVAQSALDIAMQYAQERKQFGKSLIEFPRVSGKLAMMAVEIMI 476

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E 
Sbjct: 477 ARQLTYFSAFEKDEGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEY 529

Query: 429 SIAR 432
            I+R
Sbjct: 530 KISR 533


>gi|115434652|ref|NP_001042084.1| Os01g0159400 [Oryza sativa Japonica Group]
 gi|54290198|dbj|BAD61086.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113531615|dbj|BAF03998.1| Os01g0159400 [Oryza sativa Japonica Group]
 gi|125524516|gb|EAY72630.1| hypothetical protein OsI_00496 [Oryza sativa Indica Group]
 gi|125569115|gb|EAZ10630.1| hypothetical protein OsJ_00462 [Oryza sativa Japonica Group]
 gi|215713513|dbj|BAG94650.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 433

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 18/238 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +S  +D  ++LA+     ++  F+V 
Sbjct: 169 LTEPNHGSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNGFIVR 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    G+P GL   +++NKIG R     ++ F+  F     D        +D+  ++ + 
Sbjct: 229 K----GAP-GLKATKIENKIGLRMVQNGDIVFNKVF-VPEEDRLPGVNSFQDISKVLAIS 282

Query: 320 SAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             +++   + +S+   +  H Y + R   G  L+   + +  +  +  +I A   + +RL
Sbjct: 283 RVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRL 342

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              ++  K     A+       + K W  +MA  V++   E +GG+G + +  +A+ +
Sbjct: 343 CKLYESGKMTPGHAS-------LGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAF 393


>gi|158315839|ref|YP_001508347.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111244|gb|ABW13441.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 384

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-------AQVEG 251
           + LTE  GG+D+ A+ +  +   DG  Y ++G K ++S+      + L       A+   
Sbjct: 121 MALTEPGGGSDLQAMRTTAR--PDGADYLVNGTKTWISNARRSGLVALLCKTDPAAEPAH 178

Query: 252 R-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           R +   LV ++       G    R   K+G +   + EL F++       LLG +    G
Sbjct: 179 RGISILLVEKV------PGFVISRDLPKLGYKGVESCELSFTDCRVPRDALLGGVE-GRG 231

Query: 308 PVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M+ L    +  A  +    R +  +A+ YA+ R   G  +     +   +A++A  
Sbjct: 232 FGQMMRGLEIGRIQVAARATGVGRAAFDDALRYAQERESFGQPIWRHQSVGNHLAEMATK 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A  +D  +    EA  A       K++C ++A  V   A+   GG GY 
Sbjct: 292 LTAARQLLLHAARRYDTGERADLEAGMA-------KFFCSEVAMEVALAAIRVHGGYGYS 344

Query: 426 EERSIARHYRESPANSILLGSGN 448
            E  + R++R++P   +++G G 
Sbjct: 345 TEFDVERYFRDAPL--MIVGEGT 365


>gi|328868185|gb|EGG16565.1| glutaryl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 419

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 27/243 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D A + ++ +K   G Y L+G K W  +SP++D F++ A+ + G +  F+
Sbjct: 164 FGLTEPNAGSDPAGMQTRAKK-QGGKYILNGTKTWITNSPIADVFVVWAKDDNGDIRGFV 222

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
           + + ++     GL   +++ K+  R++ T       VE+   N F  + G      GP  
Sbjct: 223 LEKGMK-----GLSAPKIEGKLSLRASITGMIVMEDVEVPAENMFPEIKG----LRGPFS 273

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +    Y      S+       + A  Y   R   G  L    + ++ +AD+A +I+   
Sbjct: 274 CLNKARY-GIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAANQLYQKKLADMATEISLGL 332

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               ++    D   +  E  +       + K   C  +  +  ++ + +GG+G  +E  +
Sbjct: 333 QACHQVGRLIDSGLATPERIS-------LIKRNSCGKSLDIARQSRDMLGGNGIADEYHV 385

Query: 431 ARH 433
            RH
Sbjct: 386 IRH 388


>gi|289583609|ref|YP_003482019.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289533107|gb|ADD07457.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 384

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 29/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVG 254
           L LTE   G+D AA+ +  ++  D  Y + GHK W  +  ++D  ++ A+     +G  G
Sbjct: 125 LSLTEPDAGSDAAALETTAERDGD-EYVIDGHKVWTTNGEVADFVVVAARTGDEDDGAGG 183

Query: 255 CFLVPRLLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             L+      G PN      +  +++       A +E E     G  +   NV       
Sbjct: 184 VSLI------GVPNPQERDGFDVVRDIPSMEGEAAIESEIKYD-GLRVPAENVIGEEGRG 236

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALD 365
            + ++  LD   +  +   V +A+A   A R          QP+     +   +AD+A +
Sbjct: 237 FRYVMEGLDIGRIGTAAQGVGVAQAAFEASRDFADEREQFGQPIREFQGVSFKLADMATE 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A+  L+ + A   D+ +  ++EAA A+  A         +A     EA++  G  GY 
Sbjct: 297 VQASRLLTLQAAAKRDQGERVTQEAAMAKAKA-------TDVAMDAATEAVQIHGSRGYS 349

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++R I R+ R +    I  G+     L V N L
Sbjct: 350 KDRPIERYMRVAKGMQIYEGTNEINRLVVANQL 382


>gi|123983052|gb|ABM83267.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
           [synthetic construct]
          Length = 421

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 112/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 277

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A   V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 278 DKTRPVV----AAGVVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 333

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 334 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 386

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 387 VEKLMRDAKIYQIYEGT 403


>gi|115903636|ref|XP_795791.2| PREDICTED: similar to acyl-coa dehydrogenase [Strongylocentrotus
           purpuratus]
 gi|115949121|ref|XP_001182807.1| PREDICTED: similar to acyl-coa dehydrogenase [Strongylocentrotus
           purpuratus]
          Length = 272

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 31/251 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252
           +TE   G+D+A I ++  +  D  Y L+G K W  +   +  + +LA+ +          
Sbjct: 13  VTEPGAGSDVAGIKTKAVRKGDD-YVLNGSKMWITNGGHASWYFVLARTDLDPKASASRA 71

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V R  E     G+   + +  +G R++ T  + F +    ++   NV  G  +  
Sbjct: 72  FTGFIVERDTE-----GVTVGKKEWNMGQRASDTRAVNFEDV---VVPKENVLLGEGQGF 123

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA+ Y+  R   G  + +   +   +AD+A+ +
Sbjct: 124 KIAMGAFDKTRPPVAAGATGLAKRALDEALKYSMERQTFGRTIANHQAVAFLLADMAVGV 183

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ R A   D+ +  +         A + K +   +A    ++A++  GG+G+  
Sbjct: 184 EAARLLTHRSAWEIDQGRRNT-------YYASLAKCYAADVANKNASDAVQVFGGNGFNS 236

Query: 427 ERSIARHYRES 437
           E  + +  R++
Sbjct: 237 EYPVEKLMRDA 247


>gi|92118848|ref|YP_578577.1| isovaleryl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
 gi|91801742|gb|ABE64117.1| isovaleryl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
          Length = 391

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 26/276 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++  K  D  Y L+G K W  +  +++  ++  + +   G   +
Sbjct: 132 LAMSEPGVGSDVVSMKTRADKKGD-RYVLNGSKMWITNGTIAETLVVYVKTDIAAGSRGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 191 TAFVIEKGLKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEENVLGEVGSGINVLMSGLDY 250

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  +   + Y   R   G  +    +++  +AD+ + + A  A
Sbjct: 251 ERAVL----AAGPLGIMQACMDVVMPYVHERRQFGQPIGSFQLVQGKVADMYVTMNACRA 306

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 307 YVYAVAKACDRGETTREDAAGAILYAAEKATQCA-------LDAIQLLGGNGYINDYPTG 359

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 360 RLLRDAKLYEI--GAGTSEIRRML----IGRELFEK 389


>gi|22760213|dbj|BAC11107.1| unnamed protein product [Homo sapiens]
 gi|119588237|gb|EAW67833.1| acyl-Coenzyme A dehydrogenase family, member 8, isoform CRA_a [Homo
           sapiens]
          Length = 288

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 38/262 (14%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPR 260
           R G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C +V  
Sbjct: 37  RSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCIVV-- 93

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNVSTGP 308
             E G+P GL + + + K+G  S  T  + F            S   GFL+    ++ G 
Sbjct: 94  --EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGR 150

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +         + A  S+     S+     +   R   G  L     ++  +AD+A  + A
Sbjct: 151 I---------NIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVA 201

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY+++ 
Sbjct: 202 AR-LMVR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDY 255

Query: 429 SIARHYRESPANSILLGSGNAM 450
           ++ ++ R+S  + IL GS   M
Sbjct: 256 AVQQYVRDSRVHQILEGSNEVM 277


>gi|328856845|gb|EGG05964.1| hypothetical protein MELLADRAFT_52672 [Melampsora larici-populina
           98AG31]
          Length = 374

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 33/251 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++     +  D  Y L+G+K W  + P +   I+ A+     G   +
Sbjct: 116 LAMSEVESGSDVVSMKLLAIE-KDDHYLLNGNKFWITNGPNASTLIVYAKTNPPKG---I 171

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G       +K+G R + T EL F        N  G + G L V       
Sbjct: 172 TAFIIESDMAGFSTSPKLDKLGMRGSNTCELVFEDCRVPKENVLGEINGGLKV------- 224

Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG     M+ +   A+ Y   R   G  +    +++  IAD+   I
Sbjct: 225 --LMSGLDLERLVLSGGPLGLMQSAFDVAMPYIHDRRQFGKPIGSFQLIQGKIADMYTKI 282

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +A+ +  + +A + D+ K    + A   +       +    A  V  +AM+ +GG+GYI 
Sbjct: 283 SASRSYVYAVARACDQGKVSRRDCAGVIL-------YTSDRALEVATDAMQMLGGNGYIN 335

Query: 427 ERSIARHYRES 437
           E    R +R++
Sbjct: 336 EYPTGRIFRDA 346


>gi|241661754|ref|YP_002980114.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863781|gb|ACS61442.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 376

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  + L+G K F++S   +D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-WVLNGVKQFITSGKHADVGIVMAV 169

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300
            +   G      FLVP         G    RL++K+G  S+ T ++ F +       LLG
Sbjct: 170 TDKAAGKRGISAFLVPT-----KTPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLG 224

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +      ++   +E  +I I    A  SV   R +   A+ YA+ R   G  L     ++
Sbjct: 225 EEGAGYKMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  +  A  + +  A+  D      +EAA A++ A        +MA  V ++A+
Sbjct: 281 FRLAEMATRVDVARQMVWHAASLKDAGLPCLKEAAMAKLNAS-------EMAERVCSDAI 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +  GG GY+ +  + R YR+     I  G+ +
Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365


>gi|119870252|ref|YP_940204.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|119696341|gb|ABL93414.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 389

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 21/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P   T   IG  GLTE   G++ A + +  ++  DG  + L+G K W  +  ++D  ++ 
Sbjct: 122 PAMATGDVIGCFGLTEPDFGSNPAGMRTTARR--DGSDWILNGSKMWITNGSVADVAVVW 179

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A+ E  +  F+VP   E     G   + +K+K+  R++ T EL   +        L D  
Sbjct: 180 ARAEEGILGFVVPAGTE-----GFSGREMKHKLSLRASNTSELHLDDVRLPAEAQLPDAR 234

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             +GP+  +    +      SV   R  L   + Y   R V    L    + +  IAD+A
Sbjct: 235 GLSGPLACLSEARF-GIVFGSVGAARDCLETTLDYVGSREVFDKPLAAYQLTQAKIADMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +++  A  L+  L    DE + R ++ ++ ++          + A A+  +    +G +G
Sbjct: 294 VELGKAQLLALHLGRLKDEGRIRPDQVSFGKLNN-------VREALAIARQCRTLLGANG 346

Query: 424 YIEERSIARH 433
              E  + RH
Sbjct: 347 ITLEYPVLRH 356


>gi|329941078|ref|ZP_08290357.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329299609|gb|EGG43508.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 385

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 119 PLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +       +   + + S  G+ +   + K+G + + T E+   N       ++G+    
Sbjct: 178 TDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEG-- 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   ++          K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYAAA-----AKSERGDSDLT-FQGAAAKCFASDVAMEVTTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|259418115|ref|ZP_05742034.1| isobutyryl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
 gi|259347021|gb|EEW58835.1| isobutyryl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
          Length = 565

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T     +W PKI S E  PT                TE   G
Sbjct: 260 GSLGTRSEIAAELILAGGTDAQKANWLPKIASAEILPTAV-------------FTEPNTG 306

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 307 SDLGSLRTRAVKDDNGDYKITGNKTWITHAARTHVMTLLARTDPETTNHRGLSMFLAEKT 366

Query: 262 --LEDG--SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
              ED     +G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 367 PGTEDNPFPTDGMTGGEIE-VLGYRGMKEYELGFD---GFHVKSENLLGGEEGKGFKQLM 422

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     A+ YA+ R   G  LI+ P +   +A +A+++  A 
Sbjct: 423 ETFESARIQTAARAIGVAQSALDIAMQYAQDRKQFGKALINFPRVSSKLAMMAVEVMVAR 482

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 483 QLTYFSAWEKDNGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 535

Query: 431 AR 432
           +R
Sbjct: 536 SR 537


>gi|226952421|ref|ZP_03822885.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226836873|gb|EEH69256.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y
Sbjct: 102 TEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHY 147

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+ + +D  +++A+ + +     +  LL D + +G+   R   KIG  +  
Sbjct: 148 RINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDATLDGVKKGRSLQKIGLHAQD 207

Query: 286 TVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           T EL F +               F +L+ +L     P E + I      ++M++  +  +
Sbjct: 208 TAELFFDDVYVPASQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +     Y   R   G  L      +  +A+  +   AA A   + A  + + +    + A
Sbjct: 257 IELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVA 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +    IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 317 ALKCF--ITDAQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|261418207|ref|YP_003251889.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319767833|ref|YP_004133334.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261374664|gb|ACX77407.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317112699|gb|ADU95191.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 404

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 44/268 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVG-----C 255
           LTE   G+D + I +  +K+ DG Y L+G K F+++    +++++ A V+ ++G      
Sbjct: 138 LTEPEAGSDASGIRTTAKKV-DGGYVLNGQKIFITNGARASWVVVFATVDPKLGRAGHRA 196

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG-------DLNVS 305
           F+V    E G+P G    R  +K+G R+N T EL F + F     LLG       + N  
Sbjct: 197 FVV----EKGTP-GFVATRTVHKMGLRANETAELLFEDCFVPDENLLGGEELYSANANKP 251

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL- 364
           +G    MK     DS    V+ M V +A A +     +    +  + P   R   + A  
Sbjct: 252 SGFQVAMKT---FDSTRPIVAAMAVGIARAAY----EYTLDIVRSEYPKQGRLYYEAAAL 304

Query: 365 ------DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
                 +I AA  L++  A   D  +  + EAA  + +A        KMA  V A  +E 
Sbjct: 305 LAEAEQEIDAARLLTWEAAWKADIGEPNAMEAAVCKAVA-------GKMALHVCAMCLEL 357

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
           +G  G ++   + + YR+     I  G+
Sbjct: 358 LGPVG-LDGHLVEKLYRDVKVFDIFEGT 384


>gi|195173806|ref|XP_002027676.1| GL14800 [Drosophila persimilis]
 gi|194114621|gb|EDW36664.1| GL14800 [Drosophila persimilis]
          Length = 580

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ S E+            V     LTE   G+D  +I S+  K 
Sbjct: 116 ILLYGTPEQKEKYLPKV-STEH------------VYAAFALTEPSSGSDAGSIRSRAVKS 162

Query: 222 SD-GIYCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
            D   Y L+G K W  +  ++D   + AQ E           +V  F+V R    G  NG
Sbjct: 163 DDKKYYVLNGSKIWISNGGIADIMTVFAQTELVDLKTGEKKDKVTAFIVERSF-GGVTNG 221

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 222 PPEKKMGIKASNTAEVYFEDVKIPIENILGKEGDGFKVAMNILNNGRFGM---GATLSGT 278

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+  +  A  +A  R   G  L +   ++  +A +++   A  +++F ++ + D     
Sbjct: 279 -MKKCIEIATSHANNRVQFGQKLKNYGSIQEKLAQMSILQYATESMAFTISQNMDNGSQD 337

Query: 387 SE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG G++ E  + R  R+     I  G
Sbjct: 338 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGFMVEAGLERVLRDLRIFRIFEG 390

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 391 TNDILRL 397


>gi|91779810|ref|YP_555018.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692470|gb|ABE35668.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 402

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 20/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+T   ++  D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 136 FALSEPEAGSDVAAMTLSAREDGDA-YVLDGDKTWISNGGIADFYVVFARTGEAPGARGI 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---- 314
              + D    GL      + I    +    L F+   G  +    +   P E  K+    
Sbjct: 195 SAFVVDADTPGLEIAERIDVIA--PHPLARLHFA---GARVPRSQMLGAPGEGFKLAMRT 249

Query: 315 --LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +     A  S+   R ++AE +  A  R + G  L D  + +  +A +AL I ++  L
Sbjct: 250 LDIFRTSVAAASLGFARHAMAEGVARAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALL 309

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A   D+ ++ + EAA A       K+   + A  VI  A++  GG G     ++  
Sbjct: 310 VYRAAWLRDQGENVTREAAMA-------KWHASEGAQQVIDAAVQLYGGMGVQSGTAVEM 362

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 363 LYREIRALRIYEGA 376


>gi|311899012|dbj|BAJ31420.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 400

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 129/328 (39%), Gaps = 57/328 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+A   TP   + + P++ + E                   ++E   G+D++AI+++G
Sbjct: 99  AHMIAAHGTPEQKEHFLPRMAAGELRGA-------------FSMSEPGLGSDVSAISTKG 145

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EG------RVGCFLV---PRLLEDGSP 267
            +  D  Y L+G K W  +   S    +L +  EG       +  FL+   P    + + 
Sbjct: 146 VRDGDS-YVLNGQKMWLTNGGTSSLVAVLCRTDEGGSTPYKNMTTFLIEKTPGFGPNATV 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS--- 320
            GL       K+G +   T EL        +L D+ V      G V        +D    
Sbjct: 205 PGLTVPGKIEKMGYKGVDTTEL--------VLQDVRVPADRVLGGVPGRGFYQMMDGVEV 256

Query: 321 -----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A       R +    I YA++R   G  + +   ++  +A++A  + AA  +   
Sbjct: 257 GRVNVAARGCGVARRAFELGIAYAQQRVTFGKKIAEHQAIQFKLAEMATKVEAAHQMMVM 316

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +    EA  A       KY   +    V+ ++    GG G+ +E  I R YR
Sbjct: 317 AARRKDGGQRNDLEAGMA-------KYLASEYCKEVVEDSFRIHGGYGFSKEYEIERLYR 369

Query: 436 ESPANSILLGSGNAMVLDVL---NLLEK 460
           E+P   +L+G G A +  ++    LLE+
Sbjct: 370 EAPM--LLIGEGTAEIQKMIVGRRLLEE 395


>gi|262375469|ref|ZP_06068702.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309723|gb|EEY90853.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 116/311 (37%), Gaps = 47/311 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    K W PK+ + E             V   +G+TE   G+D+ A+
Sbjct: 91  SDIAAPYILHIGTEEQKKYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQAM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDEYYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  +  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHAQDTSELFFDNVKVPKEQLLGQPGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R S+     Y + R   G  +      +  +A   +D  A  A   +    
Sbjct: 247 -AATALGAIRGSIDVTTQYVKERQAFGQAIGQFQNTRFVLAQAKIDELATAAFYNQNLEL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + + K   E AA         K +   M   +    ++  GG GY+ E  I+R + ++  
Sbjct: 306 YMQGKLDVETAA-------ALKSFSTDMQMKIADNLLQLFGGYGYMTEYPISRFFVDARI 358

Query: 440 NSILLGSGNAM 450
             I  G+   M
Sbjct: 359 QRIYGGTNEIM 369


>gi|190572339|ref|YP_001970184.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010261|emb|CAQ43869.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 388

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A++ +   +  D  Y L+G K F+S   +   +++    G  G   V  +
Sbjct: 128 LTEPGAGSDAASLKTTAVRDGD-FYVLNGSKAFISGAGATELLVVMARTGGAGAGGVSAI 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKI 314
                  G+ + R + K+G  S  T  + F N         G   G   ++   ++  +I
Sbjct: 187 AVPSDLPGISFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGGGFKLAMKGLDGGRI 246

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+   + +L  A  Y   R   G  L +   ++  +AD+   + AA  +  
Sbjct: 247 NI----AACSLGAAQGALDAARRYMGERRQFGKALAEFQALQFKLADMVTQLVAARQMVH 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D   S       A +   + K +       V  EA++  GG GYI E  I R  
Sbjct: 303 TAARKLDAGASD------ANVWCAMAKRFATDAGFNVCNEALQIHGGYGYIREYPIERLL 356

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 357 RDCRVHQILEGTNEIM 372


>gi|183984005|ref|YP_001852296.1| acyl-CoA dehydrogenase FadE [Mycobacterium marinum M]
 gi|183177331|gb|ACC42441.1| acyl-CoA dehydrogenase FadE [Mycobacterium marinum M]
          Length = 387

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 34/263 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+    V     LTE   G+  A + ++  +  D  + ++G K F++ +P++D F++ A+
Sbjct: 115 PIASGDVVASFALTEPGAGSSPAGLRTKAVRDGDD-WLITGQKRFITNAPVADLFVVFAR 173

Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                     +  FLVP         G+       K+G     T ++ F++    +  D 
Sbjct: 174 TRPASDKSPGIAVFLVP-----AQSAGVEVGAKDAKMGQEGAWTADVSFTD----VRVDD 224

Query: 303 NVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               G  ED+     + S        A ++V   + +L E++ YA      GG+ I    
Sbjct: 225 AALVGGSEDIGYRAAMTSLARGRVHIAAIAVGAAQRALDESVAYAST-ATQGGVTIGSFQ 283

Query: 355 MKRA-IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +A +AD    + A  AL    A  +     R       RI     K +C +MA  V  
Sbjct: 284 LVQAMLADQQTGVLAGRALVRDAARMWVSGADR-------RIAPSAAKLFCTEMAGKVAD 336

Query: 414 EAMECIGGSGYIEERSIARHYRE 436
            A++  GGSGY+    + R YR+
Sbjct: 337 LAVQIHGGSGYMRGVPVERIYRD 359


>gi|171315761|ref|ZP_02904993.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171099060|gb|EDT43840.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 385

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 28/273 (10%)

Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T  AI  + +TE + G+D+A I ++ +   D  + L+G K F+S+  ++D  ++ A
Sbjct: 113 PKAITGEAILAVAMTEPQTGSDLAGIRTRAEDKGDH-WLLNGSKTFISNGILADCIVVAA 171

Query: 248 QVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +        +G F++ R +E     G    R   K+G  S  T EL F N     +   N
Sbjct: 172 RTSTDNPRSLGLFVIERGME-----GFERGRKLKKMGQPSQDTAELFFDNV---KVPKEN 223

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGM----RVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V   P E  + L     +  ++ + G     +V+    + Y + R   G  +      + 
Sbjct: 224 VLGDPTEGFRYLTRHLAEERLVGMCGYLANAQVAFDLTLDYIKERRAFGRPIGTFQNSRF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  +I A      +     +  +  +E AA  +++    +   C+M        ++
Sbjct: 284 MMAQMRAEIDALQTFVDQCVMQHNAGRLTAETAAAGKLLGSELE---CRMVDV----GVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GGSGY+EE  I R Y ++  + I  G+   M
Sbjct: 337 LHGGSGYMEEYRICRMYTDARISRIYAGTSEIM 369


>gi|324997622|ref|ZP_08118734.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 386

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252
           + LTE  GG+D+  + +      DG Y ++G K ++S+      I L       A+ + R
Sbjct: 121 MALTEPGGGSDLQNMATHAASDGDG-YVINGSKTWISNARRSGLIALLCKTDPAAEPKHR 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
               L   L+E G   GL   +   K+G +   + EL F      +  D  +   P    
Sbjct: 180 GISVL---LVEHGP--GLTVSKDLPKLGYKGVESCELVFEGMR--VPADAVLGGTPGRGF 232

Query: 313 -KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +++  L++  + V+   + +A+A     + YA+ R   G  +     +   +AD+A  I
Sbjct: 233 GQMMKGLETGRIQVASRALGVADAALEDSLRYAQDRESFGKPIWQHQSVGNHLADMATKI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A  +D  +    EA  A++       +  ++A  V   A+   GG GY  
Sbjct: 293 TAARQLILYAAQKYDRGERCDMEAGMAKL-------FTSEIAMEVALNAVRIHGGYGYST 345

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 346 EFDVERYFRDAPL--MIVGEGT 365


>gi|324997562|ref|ZP_08118674.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 388

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 47/266 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE--- 250
           S+ +  G+TE   G D   IT+  ++  D  Y ++G K ++S  M SD  ++L + E   
Sbjct: 119 SLHVCFGVTEPGAGLDTTKITTFAKREGD-RYRVNGRKVWISKAMESDKVLLLTRTEKAD 177

Query: 251 ------------------GRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEF 291
                              R+    +P++  +  + N L    L   + +R       E 
Sbjct: 178 QVARKTDGMTLFLTDIDRDRIDVRPIPKMGRNAVTSNELFIDDLMIPVEDRVG-----EE 232

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F ++L  LN         ++L+  ++  +     RV+L  A  Y   RHV G  +  
Sbjct: 233 GKGFTYILDGLNPE-------RMLVAAEALGLG----RVALDRATRYGNERHVFGRPIGM 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD    + AA  +  +    +D+ +    EA  A       KY C +     
Sbjct: 282 NQGLQFPLADSLAKLDAAELVLRKATWLYDKGEHCGREANTA-------KYLCAEAGFEA 334

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
              A++  GG GY EE ++AR++RE+
Sbjct: 335 ADRALQTHGGMGYSEEYNVARYFREA 360


>gi|226327351|ref|ZP_03802869.1| hypothetical protein PROPEN_01219 [Proteus penneri ATCC 35198]
 gi|225204569|gb|EEG86923.1| hypothetical protein PROPEN_01219 [Proteus penneri ATCC 35198]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I+ +++        +   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMSRDSASPDKPIFTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F N        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVNKLE-KLGLRMDSCCEITFDNVELEEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMRNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G   E  I+R 
Sbjct: 298 YETAWKSDNNLITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGEHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|134102803|ref|YP_001108464.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005898|ref|ZP_06563871.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915426|emb|CAM05539.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 28/263 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +   +  D  Y L+G K F+S+  ++D  I++A+ +   G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAVRDGDE-YVLNGQKTFISNGILADLVIVVARTDPDAGHEGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILI 316
             L+ +    G    R   KIG +S  T EL F+        D+ V    +  E+ K  +
Sbjct: 183 SLLVVERGTEGFERGRNLEKIGQKSQDTAELFFN--------DVRVPAANLLGEEGKGFV 234

Query: 317 YLDSAI----MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           YL   +    +S++    + AE +      Y R R   G  +      +  +A++A ++ 
Sbjct: 235 YLMQNLPQERLSIAVASAASAEKVLDVTKEYCRTRTAFGRPIGKFQNTRFELAEMATEVQ 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R  +     +   E AA A       K+W  +M   V+   ++  GG GY+ E
Sbjct: 295 IGRVFTDRCVSDHLRGELGVEHAAMA-------KWWLSEMNKRVVDRCLQLHGGYGYMLE 347

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             +A+ + ++   +I  G+   M
Sbjct: 348 YPVAKAFLDTRIQTIYGGTTEIM 370


>gi|332376027|gb|AEE63154.1| unknown [Dendroctonus ponderosae]
          Length = 412

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256
           +TE   G+D+  + ++ +K  D  Y L+G K W     +++ + +LA+      C     
Sbjct: 149 VTEPGAGSDVNGLKTRAEKKGDE-YILNGQKMWITGGGVANFYFVLARTSQDSKCPANKA 207

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E   P G+   R +  +G R++ T  + F +     +   NV  G  +  KI +
Sbjct: 208 FTGFIVERDWP-GVIPGRKEINMGQRASDTRGIVFEDV---KIPKENVLLGEGDGFKIAM 263

Query: 317 Y-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA  YA  R   G  +     +   +AD+A+ I    
Sbjct: 264 QAFDKTRTPVAANAVGLAQRCLDEASKYALERKTFGVPIASHQAVAFMLADMAIGIETGR 323

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               + A   D     S  AA       I K W   MA    ++A++  GG+G+  E  +
Sbjct: 324 LAWMKAAWETDRGIRNSYSAA-------IAKCWAADMANKCASDAVQIFGGNGFNSEYPV 376

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 377 EKLMRDAKIFQIYEGT 392


>gi|325518876|gb|EGC98439.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 385

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251
             LTE   G+D   I ++  +  D  Y ++G K F+S   +  F++L  V G        
Sbjct: 122 FALTEPGAGSDAMGIRTRAVRDGDD-YVINGSKHFISHADTADFVILFAVTGEEDVRGQK 180

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
             RV CFL+     D    G+  +R  +    R     E+  S+   +   +LG+ +   
Sbjct: 181 RKRVTCFLI-----DKDTPGMTVRRGPHCTSLRGYHQSEIFLSDCRVSAAQILGEEHRGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D      +  A  ++   + +   A  +A  RH  G  + D       +AD+  +I
Sbjct: 236 ELANDWLTAGRVMVAANNIGRAQRAFEMAAEWAATRHQFGKRIGDFQGTSFKLADMQTEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  ++   A   D+      +AA A+++A  T          V   A++  GG G ++
Sbjct: 296 RAAELVTLYTAQKLDQGTMTDGDAALAKLLATET-------LGRVTDHAVQIYGGMGLMD 348

Query: 427 ERSIARHYRESPANSILLGS 446
           E  I R +R++    I  G+
Sbjct: 349 ELPIERFWRDARIERIWEGT 368


>gi|331663175|ref|ZP_08364085.1| putative acyl-CoA dehydrogenase [Escherichia coli TA143]
 gi|331058974|gb|EGI30951.1| putative acyl-CoA dehydrogenase [Escherichia coli TA143]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q       F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPTDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|301061637|ref|ZP_07202394.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444274|gb|EFK08282.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 382

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 14/242 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             +TE    TD+A I ++   I DG  Y L+G K W   + + DA +  A+ +       
Sbjct: 123 FAVTEPNAATDVAGIETKA--ILDGENYVLNGSKMWITHASVFDAGVCFAKTDPSQRHKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +G   GL     K+K+G RS+ T ++ F +       L+G+        E    
Sbjct: 181 LSAFIIEGDMPGLTGIAEKDKLGCRSSDTGQIVFEDCKVPKENLIGEEGQGFKIAESSLT 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               + A  S+   + ++  +I YA  R   G  +    + K+ IAD+  +I A+  L +
Sbjct: 241 YGRANIAARSLGIGQAAVDASIRYANEREQFGQKIGAFQMNKQIIADMVAEIDASRLLVY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D+ +  S E+        I K++  + A   +  A +  G   Y  E SI R Y
Sbjct: 301 RAAWLQDQKRPSSNEST-------IAKFYASEAAVRAVIGAAKIHGAYTYSSEYSIGRLY 353

Query: 435 RE 436
           R+
Sbjct: 354 RD 355


>gi|257455079|ref|ZP_05620320.1| acyl-CoA dehydrogenase [Enhydrobacter aerosaccus SK60]
 gi|257447524|gb|EEV22526.1| acyl-CoA dehydrogenase [Enhydrobacter aerosaccus SK60]
          Length = 607

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 47/301 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           L+E + G+ +A I ++    SDG Y L G+K ++S    D       ++LA++    G  
Sbjct: 165 LSEPQAGSSLADIRTRAVLSSDGRYRLFGNKMWISGGDHDISENIVHLVLAKIPDENGQL 224

Query: 255 --------CFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEF---------- 291
                    F VP+ L     +    N +    + +K+G R      L F          
Sbjct: 225 LPGVQGISLFTVPKKLLNKEGQASERNDVVLAGINHKMGYRGTVNTVLNFGEGRFTPEGE 284

Query: 292 SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL--AEAIHYARRRHVS 345
           +   G L+G+    L      + + +I + L +A +  +G   +L  A+     R R+  
Sbjct: 285 AGAIGELIGEPGKGLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRAQGRTRNER 344

Query: 346 GGILIDQPVMKRAIAD---IALDIAAATALSF-----RLA---NSFDEAKSRSEEAAYAR 394
                  P+++ A      +A    A+  L+      RL    NS +E + + +  A   
Sbjct: 345 NPASAQIPIIQHADVRRMLLAQKSYASGGLALCLYASRLVDDINSLEEEEQQKQALALLD 404

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+     LD+
Sbjct: 405 LLTPVVKSWSSQWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGVQALDL 464

Query: 455 L 455
           L
Sbjct: 465 L 465


>gi|256393763|ref|YP_003115327.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359989|gb|ACU73486.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 404

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 148/333 (44%), Gaps = 61/333 (18%)

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL-- 202
           +AG  ++ S T  + V++++  TP    +W P++F    D             + LG   
Sbjct: 82  DAGIGLALSGTGLAAVSVVSNGTPEQVGEWVPQMFGTADD-------------VKLGAFC 128

Query: 203 -TEKRGGTDIAAITSQG--QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
            +E   G+D+AA+ ++    +  D  + L+G K W  +  +++  +++A V+  +G    
Sbjct: 129 SSEPDAGSDVAAMRTRAVYDQAKDE-WVLNGTKTWATNGGIANVHVVVATVDADLGSRGH 187

Query: 256 --FLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DLNVS 305
             F++P       PN  G+   +   K G R++ T E+   +       LLG    L+  
Sbjct: 188 ASFIIP-------PNTPGMSQGQKFKKHGIRASHTAEVVLDDVRVPGSCLLGGKEKLDAR 240

Query: 306 TGPVEDMKI------LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
                + K       +   +++  +V  M V ++ A     + YA+ R   G  +++   
Sbjct: 241 LARAREGKSSRGNASMATFEASRPAVGAMAVGISRAAYEYSLEYAKTRVQFGKPIVENQA 300

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +   +AD+   + A+  L +R A      KS  S E + +++ A  T    CK    V A
Sbjct: 301 VAFKLADMKTGVDASRLLVWRAAWMARNGKSFDSAEGSMSKLFASET----CKK---VTA 353

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           EA++ +GG+G+  E  + R +R+S   +I  G+
Sbjct: 354 EAIQILGGNGFTREYPVERMHRDSAIYTIFEGT 386


>gi|328554147|gb|AEB24639.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens
           TA208]
          Length = 377

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA---QVEGRVGCFL 257
           LTE + G+D   + +   +   G Y L+G K F+++   +D ++  A     +GR G  +
Sbjct: 123 LTEPQSGSDAGGLKTTAVR-KGGSYILNGSKIFITNGGAADLYLTFALTDPAKGRKG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
              ++E  +P G    + + K+G   ++TVEL+F                GF +   N+ 
Sbjct: 180 SAFIVEKNTP-GFSIGKKEKKLGLLGSSTVELQFDQAEIPIENRLGEEGEGFSIAMKNLD 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +           A  ++  +  +L  ++ Y++ R   G  +     +   ++D+A +
Sbjct: 239 VGRI---------GIAAQALGIIEAALGCSVEYSKTRSQFGRPIASNQAVSFKLSDMATN 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +  A+ +       +EA+ A       K +    A     EA++  GG GY+
Sbjct: 290 AEAAKLLVYHAADLYQRGLPCGKEASMA-------KQFASDAAMKAAVEAVQIHGGYGYM 342

Query: 426 EERSIARHYRESPANSILLGS 446
           +E    R +R++    I  G+
Sbjct: 343 KEYPAERLFRDAKVTQIYEGT 363


>gi|320590938|gb|EFX03379.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera
           kw1407]
          Length = 547

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 29/271 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 271 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMN 330

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN----VSTGPV 309
            V  LL + S  G+  +++  + G  S+ T  + F +       LLG  N    V     
Sbjct: 331 GVSLLLIERSFGGVSTRKMDCQ-GVWSSGTTYITFEDVKVPVENLLGKENQGFRVIMTNF 389

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I +     S    RV   EA+ YA +R   G  LI+  V++  +A +A  I A+
Sbjct: 390 NHERIGIIIQCLRFS----RVCYEEAVRYAHKRRTFGKSLIEHDVIRLKLAHMARQIEAS 445

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMECIG 420
                 L N   + ++ +E  A  R+          + IT  +C + A  +        G
Sbjct: 446 YNW---LENVIYQCETMTETEAMLRLGGAIAGLKAQSTITFEYCAREASQIFGGLSYSRG 502

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G      + R YR+  A +I  GS   M+
Sbjct: 503 GQG----GKVERLYRDVRAYAIPGGSEEIML 529


>gi|315645071|ref|ZP_07898197.1| Acyl-CoA dehydrogenase type 2 domain protein [Paenibacillus vortex
           V453]
 gi|315279492|gb|EFU42797.1| Acyl-CoA dehydrogenase type 2 domain protein [Paenibacillus vortex
           V453]
          Length = 398

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 29/227 (12%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           G + ++G K F + SP+   F++ A +E   +VG FLV       S  G+  +   N +G
Sbjct: 155 GGWSITGRKTFSTLSPILKQFVVTAGMEHSEKVGAFLV------RSGPGVKVEETWNTLG 208

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTG--------PVEDMKILIYLDSAIMSVSGMRVSL 332
            R+  + ++   + F   + D  V  G        PV    +L+++ +  M ++    + 
Sbjct: 209 MRATGSHDVILEDVF---VPDAEVIRGLDYEKPEEPVPTEGVLLHIPACYMGIAYAARNF 265

Query: 333 AEAIHYARRRHVSGGILI---DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A  I +AR  H    + +   + P +KR IA I +D+  A +  ++ A+ +D+     E 
Sbjct: 266 A--IDFARH-HKPNSLTVPIAELPNIKRQIAQIEVDLLTARSYLYQTADRWDK---EVEN 319

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A  +    + KY     A  ++ +AM  +GG        + R YR+
Sbjct: 320 RASLKPELGLAKYIVTNAAVRIVDQAMRIVGGLSLSRNLPLERMYRD 366


>gi|149027884|gb|EDL83344.1| rCG22781, isoform CRA_b [Rattus norvegicus]
          Length = 395

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 38/261 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G     + C 
Sbjct: 156 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRTGGSGPKGISCI 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F +              GFL+    +
Sbjct: 215 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGL 269

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     + + R   G  L     ++  +AD+A 
Sbjct: 270 NGGRI---------NVASCSLGAAHASVVLTQEHLKVRKQFGAPLARSQYLQFQLADMAT 320

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L  R A     A +  EE   A  +  + K +  +    +  +A++  GG GY
Sbjct: 321 KLVASR-LMIRTA-----AVALQEEREDAVALCSMAKLFVTEECFTICNQALQMHGGYGY 374

Query: 425 IEERSIARHYRESPANSILLG 445
           +++ ++ ++ R+S  + IL G
Sbjct: 375 LKDYAVQQYMRDSRVHQILEG 395


>gi|126436211|ref|YP_001071902.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236011|gb|ABN99411.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 386

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 48/261 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML------AQVEGR 252
            GLTE  GG+D  A  +  +  SDG  + ++G K F+++  +D   ++       +V+GR
Sbjct: 128 FGLTEPGGGSDAGATKTTAK--SDGSTWVINGSKQFITNSGTDITKLVTVTAVTGEVDGR 185

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   LVP   +     G   +   NK+G  ++ T  L F         D+ V   P E
Sbjct: 186 KEISSILVPVPTQ-----GFTAEPAYNKVGWNASDTHPLSFD--------DVRV---PEE 229

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           ++           L  LD   ++++ + V  A     E++ YA+ R   G  +     + 
Sbjct: 230 NLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIA 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA +      A A  +  A      K   ++AA A+++A        + A     +A 
Sbjct: 290 FKIARMEARAHTARAAYYDAAALMLSGKPFKKQAAIAKLVA-------SEAAMDNARDAT 342

Query: 417 ECIGGSGYIEERSIARHYRES 437
           +  GG G++ E  +ARHYR+S
Sbjct: 343 QIFGGYGFMNEYPVARHYRDS 363


>gi|85094657|ref|XP_959931.1| hypothetical protein NCU02287 [Neurospora crassa OR74A]
 gi|28921388|gb|EAA30695.1| hypothetical protein NCU02287 [Neurospora crassa OR74A]
          Length = 546

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 29/271 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 270 ICLAITEPDAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMN 329

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN----VSTGPV 309
            V  LL +    G+  +R+  + G  S+ T  + F +       L+G  N    V     
Sbjct: 330 GVSLLLIERDFPGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKENQGFRVIMTNF 388

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I +     S    RV   E++ YA +R   G  LI+ PV++  +A +A  I A+
Sbjct: 389 NHERIGIIIQCLRFS----RVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEAS 444

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMECIG 420
                 L N   + +   E  A  R+          A +T  +C + A  +        G
Sbjct: 445 YNW---LENLIYQCEKMGETEAMLRLGGAIASLKAQATVTFEFCAREASQIFGGLSYSRG 501

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G      + R YR+  A +I  GS   M+
Sbjct: 502 GQG----GKVERLYRDVRAYAIPGGSEEIML 528


>gi|308174203|ref|YP_003920908.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|307607067|emb|CBI43438.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|328912538|gb|AEB64134.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens LL3]
          Length = 377

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA---QVEGRVGCFL 257
           LTE + G+D   + +   +   G Y L+G K F+++   +D ++  A     +GR G  +
Sbjct: 123 LTEPQSGSDAGGLKTTAVR-KGGSYILNGSKIFITNGGAADLYLTFALTDPAKGRKG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305
              ++E  +P G    + + K+G   ++TVEL+F                GF +   N+ 
Sbjct: 180 SAFIVEKNTP-GFSIGKKEKKLGLLGSSTVELQFDQAEIPIENRLGEEGEGFSIAMKNLD 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +           A  ++  +  +L  ++ Y++ R   G  +     +   ++D+A +
Sbjct: 239 VGRI---------GIAAQALGIIEAALGCSVEYSKTRSQFGRPIASNQAVSFKLSDMATN 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L +  A+ +       +EA+ A       K +    A     EA++  GG GY+
Sbjct: 290 AEAAKLLVYHAADLYQRGLPCGKEASMA-------KQFASDAAMKAAVEAVQIHGGYGYM 342

Query: 426 EERSIARHYRESPANSILLGS 446
           +E    R +R++    I  G+
Sbjct: 343 KEYPAERLFRDAKVTQIYEGT 363


>gi|295707065|ref|YP_003600140.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804724|gb|ADF41790.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 594

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 41/310 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +  +  ++G  Y L+G K W  ++  +D F++ A+++G +   F+V
Sbjct: 150 LTEPGSGSDALGARTTARLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R        G+     + K+G +S++T  L   +       +LG+  +  G V    IL
Sbjct: 210 EREFP-----GVSVGPEEKKMGIKSSSTRTLILEDALVPKENVLGE--IGKGHVIAFNIL 262

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                   + +V   + +L     Y  +R      +    + +  +A +A  + A  +  
Sbjct: 263 NIGRYKLGVGAVGAGKRALEITSQYVNQRQQFKTPIAKFSLTQEKLATMASKLYATESSV 322

Query: 374 FRLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R    F++   + SEE            A YA I   + K +  +    ++ E ++  G
Sbjct: 323 YRTVGLFEDHMGQLSEEQQKDGKQIAASIAEYA-IECSLNKVFATESLDYIVDEGVQLHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMSEYEIERLYRDSRINRIFEGTNEINRLLVPGTYLRKALKGELPLLQKAQTLQEEL 441

Query: 469 FSTLEQDLGS 478
              + Q++G+
Sbjct: 442 MMLMPQEVGN 451


>gi|170768561|ref|ZP_02903014.1| crotonobetainyl-CoA dehydrogenase [Escherichia albertii TW07627]
 gi|170122665|gb|EDS91596.1| crotonobetainyl-CoA dehydrogenase [Escherichia albertii TW07627]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S +   +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSVYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|91779136|ref|YP_554344.1| isovaleryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91691796|gb|ABE34994.1| isovaleryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 393

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K     Y L+G K W  + P  D  ++ A+ +       +
Sbjct: 129 LAMSEPNAGSDVVSMKLRAEK-KGAHYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG LN   G    M  L
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN--GGAKVLMSGL 245

Query: 316 IYLDSAIMS--VSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y + A+++   +G+ V++ +A+  Y   R   G  + +  +++  +AD+   + A  A 
Sbjct: 246 DY-ERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQPIGEFQLIQGKVADLYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +    D      E     R        +  + A  +  EA++ +GG+GYI E  + R
Sbjct: 305 LYAVGRQLDTLGK--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|111020864|ref|YP_703836.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820394|gb|ABG95678.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 430

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 123/295 (41%), Gaps = 37/295 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIA--AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           P+ +  +      +E    +D++  A++++     DG       +W  +S ++   ++LA
Sbjct: 154 PLVEGEIVGAFATSEPGASSDLSPDAVSTEATPDGDGWILRGRKRWITNSVVACVVVVLA 213

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300
           +    +  F+VP      + +G+       K+GNR   T ++   +         G + G
Sbjct: 214 RTGDDLTTFIVPT-----NASGVTIGTPDRKLGNRGQITADVNLDDVRLGPDSVLGRVGG 268

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
            L ++      ++ L Y     + +    V +A+A     + + + RH  GG L  +   
Sbjct: 269 GLRLA------LQTLTY---GRIGIGAAGVGMAQAAFDRTVAHLKSRHAFGGSLASKQHW 319

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD A D+ +A +L  + A   D  +   E  A   +MA   K     +A  +  +A
Sbjct: 320 QFVMADYAADLESARSLYLKAALRLDAGERFPEPEA---VMA---KLRGTDLAARIARDA 373

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           ++  GG G++  RS+     E P  +I   S    + +  N +++   L  Q+F 
Sbjct: 374 VQAFGGLGFV--RSLGADDTEGPVEAIYRDSKIGEIYEGANEIQRWV-LARQIFG 425


>gi|284043797|ref|YP_003394137.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283948018|gb|ADB50762.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 391

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 21/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           L ++E   G+D+AA+ +  ++  +  Y L G K F+++   +D  ++ A V+   GR G 
Sbjct: 126 LAVSEPEAGSDVAALRTFARRDGEDGYVLDGAKTFITTGDRADVVVLFATVDRTAGRDG- 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKI 314
            +   L+E G+P GL      +K+G R ++TVEL        +   L    G     M+ 
Sbjct: 185 -ITAFLIERGTP-GLVAGPAMHKLGMRGSSTVELFLDGVRAPVAARLGSERGGWALSMRS 242

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADIALDIAAA 369
           ++   L +A   V   R +   A  +A  R +   S G+  D    + A+A+    IAA 
Sbjct: 243 VVKSRLSAAAQGVGIARGAYEHARTWAHERGLLRGSRGVAQD---AQFALAEADARIAAM 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL  + A   D A     + A         K  C   A A+  E ++ +G  G  E   
Sbjct: 300 RALLQQTAALVDRA-----DGAEPVAQVSAAKLVCTDGAMAICDELVDLLGPDGDDERHG 354

Query: 430 IARHYRESPANSILLGS 446
           + R+ R++    I  G+
Sbjct: 355 VERYLRDAKVTQIYDGT 371


>gi|268531920|ref|XP_002631088.1| Hypothetical protein CBG02861 [Caenorhabditis briggsae]
          Length = 413

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 33/248 (13%)

Query: 200 LGLTEKR-----GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
            GLTE       GG +  AI  +  K     Y LSG K W  +SP++D  ++ A+   R 
Sbjct: 153 FGLTEPNHGSNPGGMETKAIWDETSKT----YKLSGSKTWISNSPVADVMVVWAR-SSRH 207

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G  +   +LE G   GL   +++ K+  R++ T ++   +       LL ++    GP  
Sbjct: 208 GNKIKGFILERGM-KGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLQGP-- 264

Query: 311 DMKILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A + ++ G   +  E  H AR+    R   G  L    +M+  +AD+  +
Sbjct: 265 ----FGCLNNARLGIAWGSLGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTE 320

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I+       R++   DE K   E+ +       I K   C  +  +  +A + +GG+G +
Sbjct: 321 ISLGLQGCLRVSRLKDEGKVEPEQIS-------IIKRNSCGKSLEIARKARDMLGGNGIV 373

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 374 DEYHIMRH 381


>gi|229060750|ref|ZP_04198105.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH603]
 gi|228718397|gb|EEL70029.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           AH603]
          Length = 382

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 110/241 (45%), Gaps = 33/241 (13%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        +G+K     + ++G K F + +P+ D FI+ A +EG+  +G F++P+  
Sbjct: 136 RGGKPETLAVKKGEK-----WIINGRKTFTTMAPVLDYFIISASIEGQEEIGEFVIPK-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------FGFLLGDLNVSTGPVEDMKI-- 314
              +  G+  +   + I  R  A+ +L   N       F  +LG      G V+   I  
Sbjct: 189 ---NTIGVTIEETWDSIAMRGTASHDLVLQNVEIENRFFTDVLG------GKVKQKGIGW 239

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+++ +  + ++    + A     + + +     +   P ++R + ++ L++  A    +
Sbjct: 240 LLHIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLY 299

Query: 375 RLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++A  +DEA+ + S +A  A +     KY     A +++ +AM  +G     E+  + R+
Sbjct: 300 QIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPLHRY 354

Query: 434 Y 434
           Y
Sbjct: 355 Y 355


>gi|226308334|ref|YP_002768294.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187451|dbj|BAH35555.1| probable glutaryl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 390

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 25/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++   + +  ++  D  + L+G K W  +  ++D  ++ A
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPGGMRTNAKRDGDD-WVLNGTKMWITNGSIADVAVVWA 182

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +  V  F+VP         G     +KNK+  R++ T EL   +       +L     
Sbjct: 183 RTDDGVRGFVVP-----ADTPGFSAPEIKNKMSLRASVTSELVLEDVRLPASAMLPKARG 237

Query: 305 STGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +GP+    + +  I   +    +   R  L  AI YAR R V    L    + +  IAD
Sbjct: 238 LSGPLGCLNEARFGIIFGA----MGAARDCLETAISYARDRKVFDKSLAAYQITQAKIAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+++     L+  L    D    R E+ +  ++          + A  +  E    +G 
Sbjct: 294 MAVELGKGQLLAIHLGRLKDAGTVRPEQVSTGKLNN-------VREAIKIARECRTILGA 346

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 347 NGITLEYPVIRH 358


>gi|213585541|ref|ZP_03367367.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 38

 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF
Sbjct: 2   IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWF 38


>gi|169796649|ref|YP_001714442.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156153|ref|YP_002318573.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|215484111|ref|YP_002326336.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332855608|ref|ZP_08435962.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868055|ref|ZP_08437990.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149576|emb|CAM87465.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213055313|gb|ACJ40215.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|213986907|gb|ACJ57206.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332727377|gb|EGJ58812.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733603|gb|EGJ64764.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHYRINGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+ + +     +  LL D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTDPQAKAKGISILLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGAIELTKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|103486350|ref|YP_615911.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98976427|gb|ABF52578.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 431

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 37/303 (12%)

Query: 174 WAPKIFSREYDPTNKA-----------------PMQKTSVAIGLGLTEKRGGTDIAAITS 216
           WAP IF      T  +                 P+    +     +TE + G D    T 
Sbjct: 93  WAPTIFGTAAPDTGNSEILAMFGTDEQKARYLKPLIDGEIVSTFSMTEPQAGADPKEFTC 152

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNG 269
           +  +  D  + + G KWF S+    AF+++  V        GR+   +VP         G
Sbjct: 153 RAWREGDE-WVIEGEKWFSSNARFAAFLIVMVVTNPENPPHGRMSMLIVP-----ADAPG 206

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAI 322
           L + R    +G+R      +     +  +   L+   G P E  K+         +  A+
Sbjct: 207 LEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLDAMLGNPGEGFKVAQARLGGGRVHHAM 266

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V   + ++   +  A  RH  G  L +   ++ AIAD  +++     L  + A   DE
Sbjct: 267 RTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQGAIADSIIELEQFRLLVLKTAWIIDE 326

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +S  E    AR    + K    K+   ++  A++  G  G   E  +A  +   PA ++
Sbjct: 327 VESGREPHGAARTHIAMCKVQMAKVCHDIVQRAIQMHGSLGMTLETPLADMWMGLPALAL 386

Query: 443 LLG 445
             G
Sbjct: 387 ADG 389


>gi|257056614|ref|YP_003134446.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586486|gb|ACU97619.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 394

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 112/295 (37%), Gaps = 65/295 (22%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P+I S E             V     LTE   G++ A + +      +G +
Sbjct: 107 TDEQKRRWLPRIASGE-------------VVASFALTEPGAGSNPAGLRTTATADGEG-W 152

Query: 227 CLSGHKWFLSSPMSDA-FIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            + G K F+++      F++ A++         +  FLVP     G   G+       K+
Sbjct: 153 VIDGTKQFITNATEAGLFVVFARMRPAPDPGNDIAVFLVP-----GDAPGVQVGAHDTKM 207

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-------------MSVS 326
           G   + T E+ FS           V  GP    + L+  D  I             + ++
Sbjct: 208 GQEGSRTAEVTFSR----------VRVGP----EALVGADGGIGYRAAMTSLARGRIHIA 253

Query: 327 GMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G+ V     +L E++ YA      G ++ D  +++  +AD    + A  AL    A  + 
Sbjct: 254 GLAVGCAQRALDESVSYAASATQGGTVIGDFQLVQAMLADQQTGVLAGRALVRDAARKYV 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + R       RI     K +C +MA      A++  GG+GY+    + R YR+
Sbjct: 314 SGEDR-------RIAPSAAKLFCTEMAGKAADLAVQVHGGAGYMRGVPVERLYRD 361


>gi|299770344|ref|YP_003732370.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700432|gb|ADI90997.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 430

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 25/209 (11%)

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK----IGNRSNATVELEFSNT 294
           ++D F++ A   G+   F+V            C   +  K    +G ++  T  L F++T
Sbjct: 237 LADVFLVSADFNGKPDVFVVQ-----------CGDTISIKNTSAMGLKATETATLRFNHT 285

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LG  +       D+  L++   A+ +   ++   A  I YA  R   G  +  +  
Sbjct: 286 PALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTAFGEPISHRQS 342

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IAD+A++I A   L    A+  +  K    EA  A+++       C + +  +  +
Sbjct: 343 VAFMIADMAIEIDAMRMLILNAASLAESGKPFHREAYLAQLL-------CAEKSMKIGTD 395

Query: 415 AMECIGGSGYIEERSIARHYRESPANSIL 443
            ++ +GG G+ +E  + R YR+  A +I+
Sbjct: 396 GVQILGGHGFTKEHPVERWYRDLRATAIV 424


>gi|255956611|ref|XP_002569058.1| Pc21g20710 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590769|emb|CAP96968.1| Pc21g20710 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 513

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 246 LAITEAFAGSDVAGLKTTAEKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFSVLL 305

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR        G+  +++K      + AT  +EF N        + V     E+ K  I 
Sbjct: 306 IPR------GEGVETKQIKTSYSTAA-ATAFVEFDNV------KVPVQNLLGEEHKGFIV 352

Query: 318 LDSA------IMSVSGMRVSL---AEAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S       +M  + +R+S+    E + ++ +R V G  LI+QPV+++ IA  I+L   
Sbjct: 353 IMSNFNHERFMMVAAVVRMSMMVVEETMKWSNQRIVFGKKLIEQPVIRQKIARMISLAES 412

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      + +++A        + K  C + A  + + A    GG G 
Sbjct: 413 NQAWLESIAYQMCNM-----TYAQQAKLLGGPIGLLKSHCTQAAGEIASLATNIFGGRGL 467

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 468 TQSGMGKVIEMFHRTYKFDAILGGT 492


>gi|157963848|ref|YP_001503882.1| crotonobetainyl-CoA dehydrogenase [Shewanella pealeana ATCC 700345]
 gi|157848848|gb|ABV89347.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 378

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +   K  DG   L+G K F++S     +I++   +      +    
Sbjct: 123 ITEPSAGSDVGSLLTT-YKRRDGKVYLTGSKCFITSAAGAPYIVVMAKDADSEKPIFTEW 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
             D S  G+   +L  K+G + ++  EL+F       S+ FG             +  + 
Sbjct: 182 FVDMSKPGIKMSKLP-KLGLKMDSCCELQFDEFELEESDMFGIEGNGFMRVKEEFDSERF 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +
Sbjct: 241 LV----ALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVY 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D     S ++A       + K++C      VI  AM+ +GG     E  I+R +
Sbjct: 297 EAAWKCDNGTMTSGDSA-------MCKFYCANAGFEVIDSAMQVLGGYAIAGEHRISRMW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDIRVDRVSGGSDEMQIL 367


>gi|73960161|ref|XP_547328.2| PREDICTED: similar to Acyl-CoA dehydrogenase, medium-chain
           specific, mitochondrial precursor (MCAD) [Canis
           familiaris]
          Length = 444

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +       G  
Sbjct: 183 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKTPAGKA 241

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 242 FTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVKVPKENVLIGEGAG 292

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V L      EA  YA  R   G +L++   +   +A++A+ 
Sbjct: 293 FKIAMGAFDKTRPPVAAGAVGLGQRALDEATKYALERKTFGKLLVEHQGISFLLAEMAMK 352

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 353 VELARMSYQRAAWEVDTGRRNT-------YFASIAKAYAADIANQLATDAVQVFGGNGFN 405

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 406 TEYPVEKLMRDAKIYQIYEGT 426


>gi|85373025|ref|YP_457087.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84786108|gb|ABC62290.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 371

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 37/254 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           + +G++E   G+D+AA+ ++   I DG Y  ++G K W  S   SD  I       R G 
Sbjct: 113 VSMGISEPDVGSDVAAVRTRA--IRDGDYWVINGEKTWITSGAYSDLLICTC----RTGE 166

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------ST 306
             +  +L D         R ++    R    + L   +T    L D  V           
Sbjct: 167 KEISHILVD---------RAESPYEVRDIEKMALNGQSTAQIFLTDCRVPASNMLGQPGD 217

Query: 307 GPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    +K+  +     A+ S+   R +L EAI Y++ R   G  L    ++   +A +A 
Sbjct: 218 GLRNTLKVFEIARCHMAMWSIGIARRALDEAIAYSKERSQHGRKLAGHQLIADKLATMAT 277

Query: 365 DIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            I AA  L+ R A S  +A  R+E E A A       K++  +MA  V  +A++  GG+G
Sbjct: 278 RIDAARLLAHR-AISLVDADVRAEAECAMA-------KWYATEMAIGVTRDALQIHGGNG 329

Query: 424 YIEERSIARHYRES 437
              E  + R  RE+
Sbjct: 330 VTREFIVERLVREA 343


>gi|311743587|ref|ZP_07717393.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312717|gb|EFQ82628.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 396

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI+++  K  DG Y ++G K +L++  S   +  ++   EG       +
Sbjct: 129 MSEPSLGSDVAAISTKAVKNDDG-YEITGQKMWLTNGGSSTLVAVLVKTDEGDDSVYRNM 187

Query: 254 GCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             FLV +    G +  G+      +K+G +   T E+ F      +  D  +   P +  
Sbjct: 188 TTFLVEKDPGFGETAQGVTVPGKIDKMGYKGIDTTEMIFEKHQ--ISADQILGGKPGQGF 245

Query: 313 -KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +++  ++   ++V    V +A       I YA++R   G  +     +   +A++A  +
Sbjct: 246 YQMMDGVEVGRVNVGARAVGIANRAFELGIAYAQQRETFGKPIAQHQAILFRLAEMATKV 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A A+  + A   D  K    EA  A+++A     +C +    V+  +    GG GY +
Sbjct: 306 ETAHAMVVKAARLKDAGKRNDVEAGMAKMLAS---EYCNE----VVEASFRIHGGYGYSK 358

Query: 427 ERSIARHYRESPANSILLGSGNA 449
           E  I R YRES    +L+G G +
Sbjct: 359 EYEIERLYRESAF--MLIGEGTS 379


>gi|85375232|ref|YP_459294.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788315|gb|ABC64497.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 396

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 41/276 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------- 250
            GLTE   G+D AA+ +  +   DG  + L+G K +++ +P +D  +++A+ E       
Sbjct: 128 FGLTEPGSGSDSAAMATTARPDPDGNGWILNGTKRYITNAPHADVGLIMARTEKEALPKN 187

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             V  F+VP      +P G+       K+G         E S+    +L D+ V    + 
Sbjct: 188 AHVSAFIVPM----DTP-GVTTASPDKKMGQ--------EGSHISDVILEDVKVPGDALL 234

Query: 311 DMKILIYLDSAIMSVSGMRVS------------LAEAIHYARRRHVSGGILIDQPVMKRA 358
             +       A+MS+   R+S            L  A+ YA  R   G  + +  ++++ 
Sbjct: 235 GGETGRGFRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQM 294

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+   +I AA A+   +    D  ++   +AA  ++       +  +M   V+   ++ 
Sbjct: 295 LAESETEIYAAEAMMKDVCERADRGENILRKAAAFKV-------FSSEMCGRVVDRVVQV 347

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GG+GY+ E    R +R++    I  G+   + L +
Sbjct: 348 YGGAGYLAEYDAERFFRDARIYRIYEGTTQILYLQI 383


>gi|293608788|ref|ZP_06691091.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829361|gb|EFF87723.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHYRVNGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+ + +     +  LL D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTDPQAKAKGISILLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGAIEITKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|325185221|emb|CCA19710.1| acylCoA dehydrogenase family member 9 putative [Albugo laibachii
           Nc14]
          Length = 612

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 31/273 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA--QVEG--RV 253
             LTE   G+D A+I ++     DG  + L+G K W  +   +D   + A  QV+G  +V
Sbjct: 171 FALTEPSSGSDAASIKTRATLSEDGKHFILNGSKIWISNGGWADVMTVFAQTQVDGKDKV 230

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
             F+V R        G+     ++K+G R + T E+ F N        L G  ++ TG +
Sbjct: 231 TAFIVERGF-----GGVTSGPPEDKLGIRGSNTCEVYFENCKVPIENVLGGGPDMKTGGM 285

Query: 310 ED--------MKILIYLDSAIMSVSG--MRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                     M IL      + + +G  +R  +     +A  R   G  L    ++K+  
Sbjct: 286 VGVGQGFKVAMNILNNGRFGLGACAGASLRRIIGSTAQHANSRKQFGKPLASFGLIKKKF 345

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             + LD  A  +++F      D      E      I A + K +  + A   I E ++ +
Sbjct: 346 TMMTLDAFAIESMAFLTTGMIDRGDPSCE------IEAAMCKVYGSEAAFNGINECIQIM 399

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GG+G++++    R+ R+    SI  G+   + L
Sbjct: 400 GGTGFMKDWPFERYLRDCRILSIFEGTNEILRL 432


>gi|260577623|ref|ZP_05845560.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258604228|gb|EEW17468.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 116/251 (46%), Gaps = 11/251 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE+  G+D  A+ ++  +  D  + ++G K F+++   S  + ++A  +   G   +  
Sbjct: 130 LTEREAGSDAGAMKTRAVRDGDE-WVINGSKCFITNGGKSTWYTVMAVTDPEAGARGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            + +    G      ++K+G + + T EL F +       ++G+    TG    ++ L +
Sbjct: 189 FMVNKDDPGFSVSGYEHKLGIKGSPTAELLFEDCRVPASRMIGE--EGTGFKTALQTLDH 246

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I   ++   + +  +A+ Y + R   G  + D    +  +AD+ + I AA  + + 
Sbjct: 247 TRPTIGAQALGIAQGAFDQAVAYVKERKQFGKAIADFQNTQFMLADMKMKIDAARLMIYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ +  +  +E+ A   +MA  +K +   +A  V  +A++ +GG G+  +  + R  R
Sbjct: 307 AASNAE--RGVAEDGAKLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPLERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|2392308|pdb|1EGD|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392309|pdb|1EGD|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392310|pdb|1EGD|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392311|pdb|1EGD|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2624510|pdb|1EGC|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624511|pdb|1EGC|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624512|pdb|1EGC|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624513|pdb|1EGC|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
          Length = 396

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 135 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 194 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 253 DKERPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 308

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 309 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 361

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 362 VEKLMRDAKIYQIYGGT 378


>gi|254227629|ref|ZP_04921060.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262395677|ref|YP_003287530.1| isovaleryl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151939671|gb|EDN58498.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262339271|gb|ACY53065.1| isovaleryl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D I+ L+G+K W  + P +  +++ A+ +       +
Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G P     Q+L +K+G R + T EL F N       +LG+ N      +
Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGEEN------Q 237

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + ++G  + + +A     + Y   R   G  + +  +++  IAD+  
Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA A  + +A + D  ++  +++A A +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAAKAYVYAVAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372


>gi|309365035|emb|CAP23738.2| hypothetical protein CBG_02861 [Caenorhabditis briggsae AF16]
          Length = 370

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 33/248 (13%)

Query: 200 LGLTEKR-----GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
            GLTE       GG +  AI  +  K     Y LSG K W  +SP++D  ++ A+   R 
Sbjct: 110 FGLTEPNHGSNPGGMETKAIWDETSKT----YKLSGSKTWISNSPVADVMVVWAR-SSRH 164

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G  +   +LE G   GL   +++ K+  R++ T ++   +       LL ++    GP  
Sbjct: 165 GNKIKGFILERGM-KGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLQGP-- 221

Query: 311 DMKILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A + ++ G   +  E  H AR+    R   G  L    +M+  +AD+  +
Sbjct: 222 ----FGCLNNARLGIAWGSLGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTE 277

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I+       R++   DE K   E+ +       I K   C  +  +  +A + +GG+G +
Sbjct: 278 ISLGLQGCLRVSRLKDEGKVEPEQIS-------IIKRNSCGKSLEIARKARDMLGGNGIV 330

Query: 426 EERSIARH 433
           +E  I RH
Sbjct: 331 DEYHIMRH 338


>gi|288924301|ref|ZP_06418319.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288344353|gb|EFC78864.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 399

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 24/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D++AIT++  +  D  Y ++G K +L++      +  ++   EG       +
Sbjct: 129 MSEPGCGSDVSAITTRADRDGDD-YVVNGQKMWLTNGARAGLVATLVKTDEGADSVYRNM 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
             FL+ +    G+  G+      +K+G +   T E+            L G      G  
Sbjct: 188 TTFLLEKEPGFGTHGGITIPGKLDKLGYKGVETTEMILDGHRTPASSILGGPEAAGKGFY 247

Query: 310 EDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M  + +   +      G+ +   E AI YA++R   G  + D   +   +A++A  + 
Sbjct: 248 QMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLAEMATKVE 307

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   +    A   D  +    EA  A+ +A     +C +    V  E+    GG GY +E
Sbjct: 308 AGHLMMVNAARKKDSGQRNDVEAGMAKFLA---SEYCHE----VTTESFRIHGGYGYSKE 360

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             I R YRE+P   +L+G G + V
Sbjct: 361 YEIERLYREAP--FMLIGEGTSEV 382


>gi|116327465|ref|YP_797185.1| isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331921|ref|YP_801639.1| isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120209|gb|ABJ78252.1| Isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125610|gb|ABJ76881.1| Isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 386

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 51/281 (18%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVG 254
           G+G+TE   GTD+  + +   K  D  Y L+G K ++++  +   F++ A++     R  
Sbjct: 132 GMGMTEPGAGTDVLGMRTITVKKGDK-YVLNGSKQYITNGNIGSVFLVYAKMSKDSKRTT 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312
            F+V     + S  G    + + K+G RS+ T +L F         D  V   P E++  
Sbjct: 191 SFIV-----ESSFPGFSVGKKEEKMGMRSSPTTQLIFE--------DCEV---PAENLVG 234

Query: 313 -------KILIYLDSAIMSVSGMRVSLAE------AIHYARRRHVSGGILIDQPVMKRAI 359
                   ++  L+   ++++   + +A+      A +  R R   G  L +   ++R +
Sbjct: 235 QEDGALVHMMRNLEIERVTLAAQSLGIAKRCVDIMADYTIRHREAFGKKLSEFGQIQRLL 294

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+   D   A+ ++    NS          AA A+++A        +MA  V   A++ +
Sbjct: 295 AESYADYQVASGINPDSRNSLG--------AASAKLVA-------TQMAERVSRNAIQAL 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  E  + R +R+S   SI  G+  AM  +++  L+K
Sbjct: 340 GGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKK 380


>gi|83952709|ref|ZP_00961439.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83835844|gb|EAP75143.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 18/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG- 254
           L +TE   G+D+  + +  ++  D  + L+G K F+S    +  S  F+   + E   G 
Sbjct: 123 LAMTEPGAGSDLRGMKASAKQDGDD-FILNGTKHFISHADIADFSIVFMATGEEETPRGP 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
              +    ++ G+P G   +     + +R      LEF N       +LG+++       
Sbjct: 182 KKLITAFFVDKGTP-GFSVREGYRNVSHRGYTNAVLEFDNCRLPKSAVLGEVHKGFQVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D      L  A   +     +L  A+ YA  R   G  +     +   +AD+A ++ AA 
Sbjct: 241 DWLGATRLQVAATCLGRAERALQHAVEYAAERRQFGQQIGKFQGVSFKLADMATELKAAE 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++     FD+      + + A++ A        +M   V  EA++  GG G ++E  +
Sbjct: 301 LLTWMGGWKFDQGNVTESDMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPL 353

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 354 ERIWRDARVERIWEGT 369


>gi|255321061|ref|ZP_05362231.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262379559|ref|ZP_06072715.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255301885|gb|EET81132.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262299016|gb|EEY86929.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 110/292 (37%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ S E             V   +G+TE   G+D+ ++ +    + D  Y L+G K 
Sbjct: 109 WLPKMVSGE-------------VVGAIGMTEPGAGSDLQSMRTNA-ILQDDSYILNGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+   +D  ++ A+ + +     V  LL D   +G       +KIG  S  T E+ F 
Sbjct: 155 FISNGQHADLVVLAAKTDPQARAKGVSLLLLDTHLDGFKKGTNLDKIGLHSQDTSEMFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           N               F +L+ +L     P E   I      A  ++  +R S+     Y
Sbjct: 215 NIKVPQNQLLGQPGQGFAYLMQEL-----PRERTAI------AATALGAIRGSIDVTTAY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A   +D  A  A   R    + + +     AA       
Sbjct: 264 VQERQAFGQPIAQFQNTRFVLAQAKIDELATAAFYERNVELYQQGQLDVATAA------- 316

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             K +   M   V    ++  GG GY+ E  I+R + ++    I  G+   M
Sbjct: 317 ALKSFSTDMQMKVADNLLQLFGGYGYMSEYPISRFFVDARIQRIYGGTNEIM 368


>gi|237731297|ref|ZP_04561778.1| acyl-coA dehydrogenase [Citrobacter sp. 30_2]
 gi|226906836|gb|EEH92754.1| acyl-coA dehydrogenase [Citrobacter sp. 30_2]
          Length = 401

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ M+    A  L LTE   G+D  + T+   + +  +Y L+G K F++      +++
Sbjct: 126 TAESTMETGDPAYALALTEPGAGSDNNSATTSYTRKNGKVY-LNGQKTFITGAKEYPYML 184

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D    G+    L +KIG    +T       VE++ S+  G
Sbjct: 185 VLARDPEPKDPKKAFTLWWVDSKKPGIKVNPL-HKIGWHMLSTCEVYLDDVEVDESDMVG 243

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 244 EEGMGFLNVMYN--FEMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 298

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S    AA A++       +C + A  VI +A
Sbjct: 299 QEKLALMAIKIDNMRNMVLKVAWQADQEQSLRTSAALAKL-------YCARTAMEVIDDA 351

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 352 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|254466189|ref|ZP_05079600.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687097|gb|EDZ47579.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T     +W PK+ S E  PT          A+    TE   G
Sbjct: 256 GSLGTRSEIAAELILCGGTEEQKANWLPKLASAEILPT----------AV---FTEPNTG 302

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 303 SDLGSLRTRAVKDENGDYKITGNKTWITHAARTHVMTLLARTDPNTTDHRGLSMFLAEKT 362

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   E   P  G+    ++  +G R     EL F N   F +   N+  G       +++
Sbjct: 363 PGTDEHPFPTEGMTGGEIE-VLGYRGMKEYELGFDN---FHVKKENLLGGEENKGFKQLM 418

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     A+ YA+ R   G  LI  P +   +A +A++I  A 
Sbjct: 419 ETFESARIQTAARAIGVAQSALDIAMQYAQERKQFGKALISFPRVSGKLAMMAVEIMIAR 478

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 479 QLTYFSAWEKDHGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFAMEYKI 531

Query: 431 AR 432
           +R
Sbjct: 532 SR 533


>gi|114765756|ref|ZP_01444851.1| glutaryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114541863|gb|EAU44899.1| glutaryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 406

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  K ++G Y L G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAIK-TEGGYRLKGAKMWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + ++     GL   ++  K+  R++ T E+   +       LL ++    GP    
Sbjct: 207 FVLEKGMK-----GLSAPKIGGKLSLRASITGEIVMDDVEVGEDALLPNVEGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367
                L+ A   ++   +  AEA     R++       D+P     + ++ +AD+  +IA
Sbjct: 258 --FGCLNRARYGIAWGVMGAAEACWMQARQYGLDRKQFDKPLAGTQLFQKKLADMQTEIA 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+    D A++  E       M  + K   C  A  +   A +  GG+G   E
Sbjct: 316 LGLQAALRVGRLMDSAQAAPE-------MISLIKRNNCGKALDIARMARDMHGGNGIQIE 368

Query: 428 RSIARH 433
             + RH
Sbjct: 369 YGVMRH 374


>gi|108801111|ref|YP_641308.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|126436949|ref|YP_001072640.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771530|gb|ABG10252.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|126236749|gb|ABO00150.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 376

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 21/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P   T   IG  GLTE   G++ A + +  ++  DG  + L+G K W  +  ++D  ++ 
Sbjct: 109 PAMATGDVIGCFGLTEPDFGSNPAGMRTTARR--DGSDWILNGSKMWITNGSVADVAVVW 166

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A+ E  +  F+VP   E     G   + +K+K+  R++ T EL   +        L D  
Sbjct: 167 ARAEEGILGFVVPAGTE-----GFSGREMKHKLSLRASNTSELHLDDVRLPAEAQLPDAR 221

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             +GP+  +    +      SV   R  L   + Y   R V    L    + +  IAD+A
Sbjct: 222 GLSGPLACLSEARF-GIVFGSVGAARDCLETTLDYVGSREVFDKPLAAYQLTQAKIADMA 280

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +++  A  L+  L    DE + R ++ ++ ++          + A A+  +    +G +G
Sbjct: 281 VELGKAQLLALHLGRLKDEGRIRPDQVSFGKLNN-------VREALAIARQCRTLLGANG 333

Query: 424 YIEERSIARH 433
              E  + RH
Sbjct: 334 ITLEYPVLRH 343


>gi|28900980|ref|NP_800635.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366191|ref|ZP_05778651.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
 gi|260879833|ref|ZP_05892188.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|260894507|ref|ZP_05903003.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|260903044|ref|ZP_05911439.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|28809426|dbj|BAC62468.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086497|gb|EFO36192.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308092082|gb|EFO41777.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|308108347|gb|EFO45887.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|308114756|gb|EFO52296.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D I+ L+G+K W  + P +  +++ A+ +       +
Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G P     Q+L +K+G R + T EL F N       +LG+ N      +
Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGEEN------Q 237

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + ++G  + + +A     + Y   R   G  + +  +++  IAD+  
Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA A  + +A + D  ++  +++A A +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAAKAYVYAVAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372


>gi|302188044|ref|ZP_07264717.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 413

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 23/248 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPR 260
           LTE   G+D+ +I +      DG + +SG K F+++      ++ LA+     G    PR
Sbjct: 145 LTEPGAGSDLQSIRTIATPTEDG-FSISGSKIFVTNGAKATILLTLARTSFDEGTN-KPR 202

Query: 261 ---LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILI 316
               L D +  G+      +K+      T+E+            L  +TG  + M+ +L 
Sbjct: 203 SSLFLLDKTQEGVSVTSEFHKMAYGLVDTMEIVLDKVVASKTAVLGGATG--KGMRHLLD 260

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAAT 370
            L+   ++++   V LA     EA  YA  R  S G+ IDQ   ++  +A++A  + AA 
Sbjct: 261 ALEVGRIAIAASAVGLAANALSEAKRYASDRK-SFGVAIDQHQAVQLRLAEMATKLVAA- 318

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL  +  EA    E    A +++ + K    + A  +  +A+   GG GYI+E  +
Sbjct: 319 ----RLMTA--EAARAKESGERADMLSGMAKLLASESARDITEDALRIHGGYGYIDEFVV 372

Query: 431 ARHYRESP 438
            R YRE+P
Sbjct: 373 ERLYREAP 380


>gi|119475766|ref|ZP_01616119.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451969|gb|EAW33202.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 395

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D   + ++  K+ DG Y ++G K W  +SP++D F++ A+ +  V   + 
Sbjct: 138 FGLTEPDHGSDPGGMITRATKV-DGGYKMNGAKMWISNSPIADIFVVWAKTDDDV---IR 193

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   +++ K+  R++ T E+   + F     LL ++    GP      +
Sbjct: 194 GFVLEKGF-KGLTAPKIEGKLSLRASVTGEIVMQDVFVPEENLLPNVQGLKGP------M 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAAT 370
             L SA   +S   +  AE   +A R++V      G  L    ++++ +AD+       T
Sbjct: 247 GCLSSARYGISWGVLGAAETCWHAARQYVLDRKQFGRPLAANQLIQKKLADM------QT 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMECIGGSGYIEERS 429
            ++  L       + +  +     +++ + +  C K +  A +A  M   GG+G  +E  
Sbjct: 301 EITLGLQGCLQAGRLKDNDQLAPELISMLKRNSCGKALDIARVARDMH--GGNGISDEFP 358

Query: 430 IARH 433
           + RH
Sbjct: 359 VFRH 362


>gi|115449711|ref|XP_001218676.1| hypothetical protein ATEG_10328 [Aspergillus terreus NIH2624]
 gi|114187625|gb|EAU29325.1| hypothetical protein ATEG_10328 [Aspergillus terreus NIH2624]
          Length = 512

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 40/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  QK  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 245 LAITEAFAGSDVAGLRTTAQKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFSVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR        G+  +++K      + AT  ++F N        + V     E+ K  I 
Sbjct: 305 IPR------GEGVETKQIKTSYST-AAATAFVQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSA------IMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADI----AL 364
           + S       +M+   +R+S+    E + +  +R V G  LI+QPVM++ +A +      
Sbjct: 352 IMSNFNHERFMMACGVIRMSMTIVEECLKWCNQRIVFGKKLIEQPVMRQKLARMISLCEA 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGS 422
           + A   ++++++ N     +S       A +  PI   K    + A  +  +A    GG 
Sbjct: 412 NQAWLESIAYQMCNMTYAQQS-------ANLGGPIGLLKSTATRAAQEIADQATNIFGGR 464

Query: 423 GYIEE---RSIARHYRESPANSILLGS 446
           G  +    + I   +R    ++IL G+
Sbjct: 465 GLTQTGMGKVIEMFHRTYKFDAILGGT 491


>gi|91224766|ref|ZP_01260026.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91190312|gb|EAS76581.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D I+ L+G+K W  + P +  +++ A+ +       +
Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G P     Q+L +K+G R + T EL F N       +LG+ N      +
Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGEEN------Q 237

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + ++G  + + +A     + Y   R   G  + +  +++  IAD+  
Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA A  + +A + D  ++  +++A A +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAAKAYVYAVAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372


>gi|330916267|ref|XP_003297354.1| hypothetical protein PTT_07727 [Pyrenophora teres f. teres 0-1]
 gi|311330006|gb|EFQ94544.1| hypothetical protein PTT_07727 [Pyrenophora teres f. teres 0-1]
          Length = 448

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 26/217 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV  A  +    T    K W P +F+ E              +  LG+TE  GG+D+A I
Sbjct: 141 SVIGAPPIVYHGTEEQKKMWLPGLFTWE-------------TSFCLGITEPGGGSDVANI 187

Query: 215 TSQGQKISDG-IYCLSGH-KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +   K +DG  Y ++G+ KW    P +       +  G+    L   ++   SP GL +
Sbjct: 188 ETTATKSTDGSYYTVNGYKKWITGMPWATHMTTAVRTGGQGASGLSVLVIPTNSP-GLTH 246

Query: 273 QRLKN---KIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +R+ N   K G  S      V +  SN  G       +        + L+    A+    
Sbjct: 247 RRIPNSGQKAGGASFVELDNVRVPASNLIGAENAGFPIVMRNFNKERFLM----AVGCNR 302

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             R  L+E+  YA  R   G  LI   ++   +A +A
Sbjct: 303 KARTCLSESFAYAHTRRTFGKPLIANQIIASKLATVA 339


>gi|293610852|ref|ZP_06693152.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827196|gb|EFF85561.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 22/319 (6%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           RLY M  +E       S T  S+ + +    ++ ++  +   +++ PT    M    V  
Sbjct: 68  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN-NFGNEEQKQKWLPT----MATGEVVT 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCF 256
            + +TE   G+D+ A+ +      D  Y ++G K F+++  + D  +++ +      G  
Sbjct: 123 AIAMTEPGTGSDLQAVRTTAVLEGDE-YVINGSKIFITNGYLCDMAVVVCKTGNSDKGSA 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
            +  ++ + +  G    +  NKIG +   T EL F N       LLG      G +  MK
Sbjct: 182 NLSLIIVEANRAGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG--MEGMGFIMLMK 239

Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L +  +  AI+  +G   + A  + Y + R   G  +      +  +A++  +I     
Sbjct: 240 ELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRT 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              R      E K   E AA A       KY    M   ++ E ++  GG GY+ E  IA
Sbjct: 300 YLDRCMELQLEEKLSVEAAAAA-------KYKISDMFSKIVDECLQLHGGYGYMLEYPIA 352

Query: 432 RHYRESPANSILLGSGNAM 450
           R Y +  AN I  G+   M
Sbjct: 353 RAYIDHRANRIYAGTNEIM 371


>gi|170737120|ref|YP_001778380.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819308|gb|ACA93890.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 21/264 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  + +    + ++E   G+D  A+++   +  DG + L+G K W   +  +D  I++A 
Sbjct: 120 PYARGATRAAMAISEPGAGSDPGALSTTAVRDGDG-WVLNGRKIWISHAAEADWTIVMAL 178

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LLGD 301
            +      G +  F+V R        G   +R    IG  S   + LE     G  LLG 
Sbjct: 179 TDRSKGKRGGMSAFIVER-----DTPGFVIERRIPMIGGLSTYEIVLEDCRIPGAQLLGR 233

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 P++       L+ A   +     ++A    +A++R   G  L ++  ++  +AD
Sbjct: 234 EGAGFAPMQARLANRRLEMAAWCIGRAERAVALLCDHAKQRTTFGVPLAERQAVQWWVAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               I A   +++       EA +R +    AR    + K +  +MA  VI  AM+ +G 
Sbjct: 294 ALTQIHACRLMTY-------EAAARVDAGQDARTQISMVKVFATEMASTVIDHAMQTLGA 346

Query: 422 SGYIEERSIARHYRESPANSILLG 445
            G  +E  + +   E+    I  G
Sbjct: 347 MGMTKEMPLQQMASEARLMRIFEG 370


>gi|149184969|ref|ZP_01863286.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831080|gb|EDL49514.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 386

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 47/279 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------- 250
            GLTE   G+D AA+ +  +   DG  + L+G K +++ +P +D  +++A+ E       
Sbjct: 119 FGLTEPGSGSDSAAMQTMARPDPDGNGWILNGTKRYITNAPHADVALIMARTEKDALPKN 178

Query: 251 GRVGCFLVPR---LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             V  F+VP     +  GSP+         K+G           S+    +L D++V + 
Sbjct: 179 AHVSAFIVPMDTPGVSTGSPD--------KKMGQSG--------SHISDVMLDDVHVPSE 222

Query: 308 PVEDMKILIYLDSAIMSVSGMRVS------------LAEAIHYARRRHVSGGILIDQPVM 355
            +   +       A+MS+   R+S            L  A  YA  R   G  + +  ++
Sbjct: 223 ALLGGETGQGFRFAMMSLDNGRISVGAASAGYARRALDSATKYATERQAFGEPIANFQLI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +A+   +I AA A+   +    D  +   + AA  ++ A        +M   V+   
Sbjct: 283 QQMLAESWTEIYAAEAMMADVTARVDRGEDTVKHAAAFKVFA-------SEMCGRVVDRV 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++  GG+GY+ E    R +R++    I  G+   + L +
Sbjct: 336 VQIYGGAGYLAEYDAERFFRDARIYRIYEGTTQILQLQI 374


>gi|260905531|ref|ZP_05913853.1| fatty acid CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 390

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 44/288 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K+W PK             +   S     GLTE   G+D A  T     +  G +
Sbjct: 107 TEEQKKEWLPK-------------LTDASGLGAFGLTEPEAGSD-AGGTRTKATLEGGTW 152

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV---------EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++G K F+++  +D   ++             GR    +   ++  G+P G   +   +
Sbjct: 153 TINGSKCFITNSGTDITRLVTATAVTGTRTSKSGREVPEISTIMIPTGTP-GFTAEPAYD 211

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333
           K+G  S+ T  L F N       LLG+             L  LD   ++V  + V  A 
Sbjct: 212 KVGWNSSDTHPLTFDNVQVPEANLLGERGRGYA-----NFLRILDEGRIAVGALSVGAAQ 266

Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               E++ YA+ R   G  + D   +   IA +   + AA +  +  A+         +E
Sbjct: 267 GCVDESVKYAKERQAFGQPISDFQGISFKIARMEARVVAARSAYYLAASRMLAGLPFKKE 326

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           AA A+++A        + A     +A +  GG G++ E  +ARHYR+S
Sbjct: 327 AAIAKMVA-------GEAAMDNARDATQIHGGYGFMNEYLVARHYRDS 367


>gi|254384912|ref|ZP_05000248.1| fatty acid acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343793|gb|EDX24759.1| fatty acid acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 119 PLAKGDAMFSYALSEPDAGSDAAGMKTRAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 178 TDPEKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTCEVYLDNV--RIPADRMIGAEG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A   +   +  ++           K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYSAAAKSERVSAGGDKEDLT-FFGAAAKCFASDVAMEVTTDAVQLLG 351

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 352 GYGYTRDYPVERMMRDAKITQIYEGT 377


>gi|84517024|ref|ZP_01004381.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509142|gb|EAQ05602.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 18/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+  + +  ++   G + L+G K F+S      F +     G       P
Sbjct: 123 LAMTEPGAGSDLRGMQANARQ-DGGDWVLNGTKHFISHADIAGFTIAFMATGEEDTPRGP 181

Query: 260 R------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           +       ++ G+P     +  +N + +R  +   L+F +       +LG+++       
Sbjct: 182 KKKITAFFVDKGTPGFTVREGYRN-VSHRGYSNAILDFDDCRVPAENILGEIHKGFEVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D      L  A   +     +L  A+HYA  R   G  +     +   +AD+A+++ AA 
Sbjct: 241 DWLGATRLQVAATCLGRADRALDHAVHYAAERRQFGQQIGKFQGVSFKLADMAMELKAAE 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++     FD+      + A A++ A        ++   V  EA++  GG G +++  +
Sbjct: 301 LLTWEAGWKFDQGSVTEADMAMAKLKA-------SEVLAMVADEAIQIHGGMGLMDDLPL 353

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 354 ERIWRDARVERIWEGT 369


>gi|329923988|ref|ZP_08279292.1| acyl-CoA dehydrogenase, middle domain protein [Paenibacillus sp.
           HGF5]
 gi|328940947|gb|EGG37254.1| acyl-CoA dehydrogenase, middle domain protein [Paenibacillus sp.
           HGF5]
          Length = 400

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 30/235 (12%)

Query: 216 SQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCY 272
           +  +++S G + ++G K F + SP+   F++ A +E   +VG FLV       S  G+  
Sbjct: 148 TTARRVSGG-WHITGRKTFSTLSPILKQFVVTAGIEHSEKVGAFLV------RSGPGVKV 200

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--------VEDMKILIYLDSAIMS 324
           +   N +G R+  + ++   + F   + D  V  GP        V    IL+++ +  M 
Sbjct: 201 EETWNTMGMRATGSHDVILEDVF---VPDTEVIRGPDYEKPEFQVPTEGILLHIPACYMG 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILI---DQPVMKRAIADIALDIAAATALSFRLANSFD 381
           ++    + A  I +AR  H    + +   + P ++R IA I  D+  A +  ++ A+ +D
Sbjct: 258 IAYAARNFA--IDFARH-HQPNSLTVPIAELPNVQRQIAHIEADLLTARSYLYQTADRWD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    +E  A  +    + KY     A  ++ +AM  +GG     +  + R YR+
Sbjct: 315 K---EAENRAALKPELGLAKYVVTNAAVRIVDQAMRIVGGLSLSRKLPLERMYRD 366


>gi|326343613|gb|EGD67375.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. 1125]
          Length = 341

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 66  TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 124

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 125 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 181

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 182 VGEEGMGFLNVMYN--FEMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 236

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 237 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 289

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 290 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 327


>gi|312212338|emb|CBX92421.1| hypothetical protein [Leptosphaeria maculans]
          Length = 2285

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 59/309 (19%)

Query: 200  LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255
            + +TE   G+D+A I +   K +DG  Y ++G K ++++ +  A+  +A   G  G    
Sbjct: 2005 IAITEPDAGSDVANIATTAVKTADGKHYVVNGTKKWITNGIWSAYSTMAVRTGGPGAQGL 2064

Query: 256  --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
               +VP     G P G+  +RLK  +G + +A        TF   L D+ V   PVE+  
Sbjct: 2065 SLLVVPL---KGYP-GVKMRRLK--VGGQVSA------GTTF-IELDDVMV---PVENLI 2108

Query: 312  ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                  MK ++       L  AI +    RV+L+ A+ Y   RH     LI QPV++  +
Sbjct: 2109 GEEGMGMKYIMTNFNHERLTIAIGATRQSRVALSTALSYTLTRHAFSAPLITQPVIRHRL 2168

Query: 360  ADIALDIAAATA-LSFRLANSFDEAKSRSE-----EAAYARIMAPITKYWCCKMAPAVIA 413
            A     + + +A L   +      A  R+        A  +  A I  + C ++      
Sbjct: 2169 ARAGAQLESLSAWLDAFVYQQTLLAPDRAAVLLGGPTALLKAQAGIVLHECAQV------ 2222

Query: 414  EAMECIGGSGYIEE---RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
             AM  +GG+GY        + R +RE P   I  GS + M       L+ G  +  + F+
Sbjct: 2223 -AMLLLGGNGYTRSGRGELVERIWREVPGIRIPGGSEDVM-------LDLGVRMLVKRFA 2274

Query: 471  TLEQDLGSS 479
                + GSS
Sbjct: 2275 RGRGEGGSS 2283


>gi|302517740|ref|ZP_07270082.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|318061930|ref|ZP_07980651.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318078438|ref|ZP_07985770.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
 gi|302426635|gb|EFK98450.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 409

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +  EA+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEEALEYAKTRTQFGRPVIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++  GG+GY  E  + R +R+S   +I
Sbjct: 334 GKP------FTSAEGSMSKLFASETAKQVTAQAIQIFGGNGYTREYPVERMHRDSAIYTI 387

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 388 FEGTSEIQRLVIARTL 403


>gi|226361194|ref|YP_002778972.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239679|dbj|BAH50027.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 47/283 (16%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIML 246
           P   T   IG + ++E   G+D+ AI  Q   ++DG  + ++G K F++S  ++D  I+ 
Sbjct: 115 PGFVTGETIGAIAMSEPAAGSDLRAI--QTTAVADGDTWVINGSKTFITSGILADLVIVF 172

Query: 247 AQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------- 294
           A+ +   G      F+V    EDG+P G    R  +K+G  +  T EL F +        
Sbjct: 173 AKTDSAAGSRGFSLFVV----EDGTP-GFARGRKLDKLGLHAQDTAELFFEDVRVPKENL 227

Query: 295 -------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                  F +L+  L     P+E + I I    +  +V G        + Y + R   G 
Sbjct: 228 LGEVGSGFAYLMQSL-----PLERLGIGIAAQVSAEAVLGW------TLDYVKERTAFGK 276

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   +   +A++   +  + A   R     +     + +AA A       K W  ++
Sbjct: 277 RVGEFQGLGFTLAELQTAVEVSRAYIDRCVREHNAGTLTAVDAAKA-------KLWATEL 329

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              VI   ++  GG GY+ E  +A+ Y ++    I  G+   M
Sbjct: 330 QGRVIDAGVQFHGGYGYMMEYPVAKAYIDARIQRIYGGTNEIM 372


>gi|183983613|ref|YP_001851904.1| peptide synthetase Nrp (peptide synthase) [Mycobacterium marinum M]
 gi|183176939|gb|ACC42049.1| peptide synthetase Nrp (peptide synthase) [Mycobacterium marinum M]
          Length = 3168

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 23/279 (8%)

Query: 191 MQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           M+  ++   L +TE    G+++  +TS+  +  D  + +SG K  ++ +P++  F+ L  
Sbjct: 108 MRSGNMICALAITEPDVSGSNLRGLTSKAVRDGDD-WVMSGAKSAITGAPLAAFFVTLIP 166

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                G  L   L+   SP G+  Q  ++  G  S     + + N       +LG++   
Sbjct: 167 FIVDGGVALTAVLVPSDSP-GVTIQPPEDMYGLWSVPISGVRYDNVHIQSWQILGEVGSG 225

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +    ++  + +  +S+  ++        +A RR VS G L D PV +R I+ I  +
Sbjct: 226 VDVIGKSLLVGRICAGAISLGVLKRCAQLMYRFASRRQVSTGRLADDPVFQRRISRITAE 285

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IAA  AL   +   F+      +E A A       K    + A     +AM+ +G  GY+
Sbjct: 286 IAAVEALLSTITTEFEV----PQEIALA------LKVASSEFAHRATDDAMQTLGWRGYM 335

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E   +A   R+     + +G G +  L    L E G+ L
Sbjct: 336 EASGVAELMRD--VRFLRIGEGPSEAL----LTELGSRL 368


>gi|116694859|ref|YP_729070.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529358|emb|CAJ95705.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 388

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 23/248 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           AP  +      + ++E   G D A +T++ ++  DG  + L+G K W   +  +D  I++
Sbjct: 119 APYARGETVSAIAISEPGAGGDPAMMTTRAER--DGEHWVLNGRKIWISRAARADWTIVM 176

Query: 247 AQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LL 299
           A  +      G +  F+V R    G+P G   +R    IG  S   V LE        LL
Sbjct: 177 AVTDKAKGARGGISAFIVER----GTP-GFRVERRIPMIGGASTYEVVLEDCRIPASQLL 231

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G       P++       +  A   +   + +L     YA +R   G  L  +  ++  +
Sbjct: 232 GTEGQGFAPMQARLSTRRVQMAAWCIGRAQRALDMICEYAPQRQTFGAPLAQRQAIQWWV 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD A  I A   +++       EA SR +    AR    + K +  +MA  VI  AM+  
Sbjct: 292 ADAATRIHACRLMTY-------EAASRIDAGDEARTQVSMIKVFATEMAWDVIDHAMQTF 344

Query: 420 GGSGYIEE 427
           G  G  +E
Sbjct: 345 GAMGMTKE 352


>gi|50085334|ref|YP_046844.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           sp. ADP1]
 gi|49531310|emb|CAG69022.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           sp. ADP1]
          Length = 381

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 34/277 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           + M    V   +G+TE   G+D+ A+ +    + D  Y L+G K F+S+   +D  ++  
Sbjct: 112 SKMVTGEVVGAIGMTEPGAGSDLQAMRTSA-ILQDDHYVLNGSKTFISNGQHADLVVLAV 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294
           + + +     V  +L D   +G       +KIG  S  T EL F +              
Sbjct: 171 KTDPQARAKGVSLMLVDTHLDGFKKGTNLDKIGLHSQDTSELFFDHVKVPKDQLLGQAGQ 230

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            F +L+ +L     P E   I      A  ++  +R ++  A  Y + R   G  +    
Sbjct: 231 GFAYLMQEL-----PRERTAI------AATALGAIRGAIDVATAYIQERQAFGQAIASFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +  +A   +D  A  A   R  + + E K   E AA         K +   M   V  
Sbjct: 280 NTRFVMAQAKIDELATAAFYERNVSLYQEGKLDVETAA-------ALKSFSTDMQMKVAD 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++  GG GY+ E  I+R + ++    I  G+   M
Sbjct: 333 NLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTNEIM 369


>gi|332235166|ref|XP_003266778.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 424

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 32/257 (12%)

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLL 262
           +D+ ++  + +K  +  Y L+G+K W  + P +D  I+     LA V    G  +   ++
Sbjct: 172 SDVVSMKLKAEKKGNH-YILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIV 228

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLD 319
           E G P G    +  +K+G R + T EL F +       +LG  N          ++  LD
Sbjct: 229 EKGMP-GFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGV-----YVLMTGLD 282

Query: 320 SAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++G     M+  L   I Y   R   G  +    +M+  +AD+   + A     +
Sbjct: 283 LERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVY 342

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + DE    +++ A   +       +  + A  V  + ++C GG+GYI +  + R  
Sbjct: 343 NVAKACDEGHCTAKDCAGVIL-------YSAECATQVALDGIQCFGGNGYINDFPMGRFL 395

Query: 435 RESPANSILLGSGNAMV 451
           R++    I  G+G + V
Sbjct: 396 RDAKLYEI--GAGTSEV 410


>gi|325121451|gb|ADY80974.1| acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/299 (20%), Positives = 122/299 (40%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y
Sbjct: 102 TEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHY 147

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+ + +D  +++A+ + +     +  LL D + +G+   R   KIG  +  
Sbjct: 148 RINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDAALDGVKKGRSLQKIGLHAQD 207

Query: 286 TVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           T EL F +               F +L+ +L     P E + I      ++M++  +  +
Sbjct: 208 TAELFFDDVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +     Y   R   G     QP+ +  + +    +A A   +       D+  +  ++  
Sbjct: 257 IELTKDYVLERKAFG-----QPLSQ--MQNTRFVLANAQIKAKAAQAFVDQCAALYQQHL 309

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +       K +   +   VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 310 LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|289749501|ref|ZP_06508879.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
 gi|289690088|gb|EFD57517.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
          Length = 271

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 13  LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 71

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 72  LLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSE 131

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATA--- 371
            +  A  + S  +  L     + R R   G  LI +  ++  +A++A  +D+A   A   
Sbjct: 132 RIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHV 191

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 192 VERQLAGETDLIA----QVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVE 240

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R YR+     + +G G   +L  L
Sbjct: 241 RQYRD--MRILGIGGGTTEILTAL 262


>gi|333005938|gb|EGK25454.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-272]
 gi|333018816|gb|EGK38109.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-227]
          Length = 383

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQAKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|332030391|gb|EGI70098.1| Glutaryl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior]
          Length = 414

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 29/256 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIML 246
           P   +   IG  GLTE   G+DI A+ ++        +Y L+G K W  +SP++D  I+ 
Sbjct: 143 PKMVSGEKIGCFGLTEPNHGSDIGAMETRAIHDSKQKVYKLNGSKTWITNSPVADVLIVW 202

Query: 247 AQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+ + G++  F++ R   + + + L   +++ K   R++ T  +   N        LNV 
Sbjct: 203 AKCDDGQIRGFIIER---EAAGDRLSTPKIEGKFSLRTSITGMILMDNVIVPEENLLNVQ 259

Query: 306 --TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYAR-----RRHVSGGILIDQPVMKR 357
              GP         L++A   ++   +  AEA ++ AR     R+     +  +Q V K+
Sbjct: 260 GLKGPFS------CLNNARYGIAWGALGAAEACLNIARSYTLERKQFKRPLAANQLVQKK 313

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + D+  DIA       R+    DE K   E       M  I K      A  +   A +
Sbjct: 314 -LVDMMCDIAIGLQACLRVGRLKDENKLAPE-------MISIIKRNSTVKALEIARNARD 365

Query: 418 CIGGSGYIEERSIARH 433
            +GG+G  +E  + RH
Sbjct: 366 MLGGNGISDEYHVIRH 381


>gi|258593761|emb|CBE70102.1| Acyl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 399

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 113/266 (42%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +        LTE   G+D+A I +  ++   G Y L+G K W   + ++D F++ A 
Sbjct: 113 PQARGEKLAAFALTEPDAGSDVAGIRATARR-DGGSYILNGEKTWISLADVADHFLVFAY 171

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE---LEFSNTFGFLLG 300
            +   G      F+V R  E G  +   + +L  +IGN  +  ++   +   N  G    
Sbjct: 172 TDRSAGARGISAFIVERGFE-GVSSFSIHHKLGGRIGNTGSIALQDARVPADNRIGAEGV 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            L ++   +++ +  +    A  +V  M   L  ++ YA +R   G  + +  ++++ IA
Sbjct: 231 GLKIALSALDNGRYTV----AAGAVGLMEACLEASVAYAEQRQSFGRPIGEHQLVQQKIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +         L +++    ++    + E + A       K+  C  A     +A++  G
Sbjct: 287 RMVAGRDVGRLLYYQVGWLKNQGMRCTREVSLA-------KWINCDNAFRAADDAVQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY +E  + R++R +  + I  G+
Sbjct: 340 AYGYSDEFPVERYFRNARGSLIYEGT 365


>gi|291295480|ref|YP_003506878.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470439|gb|ADD27858.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 581

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 28/264 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE + G+D     ++ +  +DG  Y L+G K W  ++  +  F + A+    +  FLV 
Sbjct: 148 LTEPQSGSDAMGAKTRAELSADGKYYILNGTKMWISNAGFAHLFTVFAKTPEGLTAFLVE 207

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312
           R        GL     + K+G ++++T       V++   N  G L     ++   +   
Sbjct: 208 R-----DTPGLRLGGEEKKMGIKASSTRQVFLEDVKVPVENVLGELGKGHKIAFNVLNVG 262

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +   +   +   + +S      YA+ R   G  +    ++++ +A++A  I A  + 
Sbjct: 263 RYKLGAGAIGGAKGALALS----AKYAQERVAFGKPIAQFGLIQQKLAEMAARIFAGESA 318

Query: 373 SFRLANSFDEA-----KSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +R     D+A     K+ + EA  A      I A I K    ++   V+ E ++  GG 
Sbjct: 319 VYRTMGMIDQALSNLDKANAAEAVLAGIEEYAIEASIIKVLGSEVLDYVVDEGVQIHGGY 378

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY  E  I R YR+S  N I  G+
Sbjct: 379 GYSAEYEIERAYRDSRINRIFEGT 402


>gi|297560070|ref|YP_003679044.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844518|gb|ADH66538.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 393

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 25/266 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQ 248
           P+ +   A    +TE   G+D+  + +    ++ G Y ++GHK F      +D  I++A+
Sbjct: 124 PVVRAERACCFSMTEDDAGSDVRRMRTTATPVAGG-YRVTGHKVFSTGGTFADFSILVAR 182

Query: 249 VEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLG 300
           ++    R   F V    +  SP            G    + V L+       N  G    
Sbjct: 183 LDSSDDRYCAFFV----DLDSPGCRVTPGRTPLSGQNIESDVVLQDCFVPSENLLGEEGQ 238

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            L ++ G V   ++L        ++   R ++  A+ +A  R VSGG+LI++  ++  +A
Sbjct: 239 GLRIALGRVTTNRLL----HCPTALGAARRAIRLALDFAATRQVSGGLLIEKQAIQHKLA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A D  AA ++++    + D  +         R+ + + K +  + A A+  +AM+  G
Sbjct: 295 DMATDFYAARSMTYDALAALDAGER-------PRVESFMCKLFVAERAFAIADQAMQIHG 347

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +G +    +   +R+     +L G+
Sbjct: 348 KAGMVRGAPVDVIWRQLRMFRVLTGA 373


>gi|254386831|ref|ZP_05002120.1| long-chain-acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345665|gb|EDX26631.1| long-chain-acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 380

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 41/309 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS      + T    + W P   S E           T  AI +  TE   G+D
Sbjct: 94  IIGPYLTS------LATEEQKRRWLPGFCSGE-----------TITAIAM--TEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I +  +   D  + L+G K F+S+  ++D  I++A+     G   +  L+ +    G
Sbjct: 135 LQGIRTTAEDRGDH-WVLNGSKTFISNGILADLVIVVAKTTPEGGAHGLSLLVVERGAEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +KIG +S  T EL F +       LLG+LN +      + ++  L    M ++
Sbjct: 194 FERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGELNGAF-----VHLMTNLAQERMGIA 248

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              ++ AE +      Y + R   G  L     ++  IA++A + A             D
Sbjct: 249 MAGIAAAEYLLEITTRYVKEREAFGRPLSKLQHIRFEIAEMATECAVTRTF-------LD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +         + A + K+W  ++   V    ++  GG GY+ E  +AR + +    +
Sbjct: 302 RCITDHSNGELDHVHASMAKWWATELQKRVADRCLQLHGGYGYMAEYQVARAFVDGRIQT 361

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 362 IYGGTTEIM 370


>gi|86751043|ref|YP_487539.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574071|gb|ABD08628.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 391

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 55/266 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA----------Q 248
            G+TE   GTD  ++ +  +K  +G Y ++G K W   +  SD  I+LA          +
Sbjct: 125 FGVTEPTSGTDTTSLKTFAKKDDNGDYVVNGQKIWTSRAEYSDLMILLARTTPKDQAAKK 184

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  FLV   + +   +GL  + ++  +   ++AT E+ F++               
Sbjct: 185 TEG-LSVFLVD--MREARGHGLEIRPIRTMM---NHATTEVFFTDLKVPKENLIGEEGKG 238

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  +N         +ILI    A   V   +  +A+A +YA+ R V G  +     
Sbjct: 239 FRYILSGMNAE-------RILI----AAECVGDAKWFIAKASNYAKDRTVFGRPIGQNQG 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA    ++ AA  +       ++       EA  A+++A          A A    
Sbjct: 288 IQFPIAKAYANMRAAELMVKEATRKYEAGMDCGAEANMAKMLA----------ADASFEA 337

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  CI   GG G+ EE  + R +RE+
Sbjct: 338 ANACIQTHGGFGFAEEYDVERKFRET 363


>gi|158317323|ref|YP_001509831.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158112728|gb|ABW14925.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 392

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 15/224 (6%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G + F L   ++D  ++ A  EG +  F VP     G   GL   RL      R  
Sbjct: 165 YTLRGTRHFVLDGALADLILVTAWAEGGLSLFAVP-----GDAAGLTRSRLPVMDLTRKQ 219

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           A  +L FS+T   L+G      GPV D  + L  +  A  S  G R  L +A+ +A+ R 
Sbjct: 220 A--DLTFSDTPARLIG-AEGDAGPVIDQVLRLACVALANESAGGARTVLEQAVRHAKDRL 276

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--SFDEAKSRSEEAAYARIMAPITK 401
             G  +     +K   AD+ + +  + ++++  A   + + A   ++  A A  MA   K
Sbjct: 277 QFGRPIGSFQAVKHKCADMLVAVEGSKSVAYHAAQVAAGNSAAGNTDRLARAASMA---K 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  +   +  A+ ++  GG G+  E S   +++ +  + +L G
Sbjct: 334 AYVGEAYFSAAADNIQIHGGIGFTWEHSAHLYFKRAKTSELLFG 377


>gi|304310457|ref|YP_003810055.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796190|emb|CBL44396.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 445

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 115/299 (38%), Gaps = 27/299 (9%)

Query: 175 APKIFSREYD-------PTNKAPMQKTSVAIGLGLTEKRGGTDI----AAITSQGQKIS- 222
           AP +FS  +        P  +A  Q         +TE   G+D      A  ++ + ++ 
Sbjct: 119 APILFSGNWQVIKQVVLPAFRACEQGEPQLFAFAITEPGAGSDAEEGHVAAHNKPELVAH 178

Query: 223 --DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
              G + L G K F+S      ++++       G       L D    G    R ++K+G
Sbjct: 179 PAPGGWRLRGRKVFISGGDRARWVVVLAALAGEGYPSWTAFLVDTLQPGFVRVRNEHKMG 238

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++A  ELEF + F     +LG L               L  A M+V   + +   A  
Sbjct: 239 MRASAATELEFCDCFVPDARVLGGLRNGWALSRATLNFSRLPVASMAVGFAQAATDIATD 298

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A R+ + G  LI    M+  IAD+    A+  AL +  A ++   +++          A
Sbjct: 299 HACRQMLGGRPLIHYQHMQLGIADLQAATASIRALVWEYARAWTPWQAK----------A 348

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            I K+     A  VI  AM+  G  G      + + +R++    I  G+     L V+ 
Sbjct: 349 SIAKFQATDQAQQVIERAMDLCGEMGLTHAMGLEKIFRDNRLTRIFEGTNQINRLSVIE 407


>gi|284165600|ref|YP_003403879.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015255|gb|ADB61206.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 398

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 59/285 (20%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+    +     LTE   G+D   + ++ +K  D  + ++G K ++++ P +D  ++ A+
Sbjct: 132 PLMDGEITTCFALTEPGHGSDAHYMDTRAEKDGD-EWLINGQKVYITNGPYADFAMVFAR 190

Query: 249 VEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             G  G      CFLV     D    G     +   +G       EL F         D 
Sbjct: 191 TSGDDGDLEGITCFLV-----DADNPGFEVGTIHRAMGMTPGTHAELHFD--------DC 237

Query: 303 NVSTGPVEDMKILIYLDSAIMS----VSGMRVSLAE------------AIHYARRRHVSG 346
            VS    ED ++L  +D    S    + G R+++A             ++ YAR R    
Sbjct: 238 RVS----ED-QVLGEVDQGFQSAMSWIGGGRINIAAGSVGTAQFLLDMSVDYARNRET-- 290

Query: 347 GILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
               D+P+  R      +A++A DI     L    A   D  +   +E + A++      
Sbjct: 291 ---FDEPIGHRQGVSFQLAELATDIEQVRQLYRYAAWKMDNGERARKEESMAKLRG---- 343

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               ++A      AM+  GG+G++++  I R+YR +    I  G+
Sbjct: 344 ---AELANEAADIAMQVHGGAGFMKDLPIERNYRSARVFRIFEGT 385


>gi|302551893|ref|ZP_07304235.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469511|gb|EFL32604.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 385

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 21/276 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           S E      +P+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ 
Sbjct: 109 SEELKKKYMSPLAKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGDH-YVLNGVKRWITNAG 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---F 295
            S+ + ++A  +       +   + + S  G+ +   + K+G + + T E+   N     
Sbjct: 168 ESEFYTVMAVTDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPA 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             ++G+    TG    MK    LD   ++++   + +A+     A  Y + R   G  + 
Sbjct: 228 DRMIGEEG--TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIA 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+A+ I+AA AL+++ A     A  R +  A    +    K +   +A  
Sbjct: 283 DFQGIQFMLADMAMKISAARALTYQAAA----ASERGD--ADLTYLGAAAKCFASDVAME 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 337 ATTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|226358172|ref|YP_002787911.1| glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319815|gb|ACO47809.1| putative glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 386

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 23/241 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE  GG+D  A+ ++ ++  D  Y L+G+K W  +SP++D  ++ A+  EG V  F+
Sbjct: 130 FGLTEPDGGSDPGAMRTRARRDGDD-YVLNGNKMWITNSPVADFAVVWAKDDEGVVRGFI 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR        G    ++  K+  R++ T E+   +     +   N+  G       L  
Sbjct: 189 VPR-----DARGFSTPKIHRKMSLRASVTGEIVLQDCR---IPAANLLPGSGGLKSPLSC 240

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL-----DIAAATAL 372
           L SA   ++   +   E+++     + +G     QP+  R +    L     D  A   L
Sbjct: 241 LTSARYGIAWGAMGALESVYETALEYTTGRQTFGQPIASRQLVQDKLVRMVTDHTAGLLL 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + +L    D  +    + + A       K    ++A      A E +GG+G   E  + R
Sbjct: 301 AVQLGALKDAGRMAPTQVSLA-------KRNNVRVALTGARLARELLGGNGITTEYPVIR 353

Query: 433 H 433
           H
Sbjct: 354 H 354


>gi|289583054|ref|YP_003481520.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532607|gb|ADD06958.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 416

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 53/285 (18%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
           P+ +  +     +TE +  GG+D   + S   K  D  + ++ HKW+ S  + +D ++++
Sbjct: 119 PLVQGEMTSAFAMTEPKQGGGSDPKMLQSTAVKDGDE-WVINAHKWWTSDGLDADFYLLM 177

Query: 247 AQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG-----NRSNATVELEFSN- 293
           A+        EG     LVPR       +G+   R    +G      R+    E++F N 
Sbjct: 178 ARTDLDAHPYEG-TSIILVPR-----DADGVEVVRNVPHLGGHGITERTGGHAEMKFDNV 231

Query: 294 -----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARR 341
                        GF +  + +  G +          +  M  SGM   SL  A  Y   
Sbjct: 232 RVPVENTIGEENAGFRIAQMRLGGGRL----------THCMRYSGMAERSLDIAKAYLAE 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L ++  ++  IAD    + AA  +    A   D    RS+    ARI   + K
Sbjct: 282 REAFGSTLEEKQALRHRIADAETRLHAARTMVRHAARELD----RSD----ARIEVAMAK 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +   +    I  A++C GG+G  ++  IA  Y    A  I+ G+
Sbjct: 334 MFTANVTQDTIDLALQCCGGNGIGKDLPIAHFYEAVRAFRIVDGA 378


>gi|333028591|ref|ZP_08456655.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332748443|gb|EGJ78884.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 409

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +  EA+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEEALEYAKTRTQFGRPVIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++  GG+GY  E  + R +R+S   +I
Sbjct: 334 GKP------FTSAEGSMSKLFASETAKQVTAQAIQIFGGNGYTREYPVERMHRDSAIYTI 387

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 388 FEGTSEIQRLVIARTL 403


>gi|256826405|ref|YP_003150365.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256689798|gb|ACV07600.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 617

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 139/321 (43%), Gaps = 64/321 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR---- 252
           LTE   G+D+ A  ++  +  DG + L+G K F+++  +D +      +LA+ EG     
Sbjct: 164 LTEPDAGSDVGAGVTKAVQQEDGTWHLTGVKRFITNGDADFYENNIHFVLARPEGAGPGT 223

Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN-----TFGFLL 299
             +  F+VP+   D      G  NG     +++K+G + + T EL F         G LL
Sbjct: 224 KGLSLFVVPKHHYDPQTGELGERNGAYVTNVEHKMGLKVSTTCELRFGEDPSTPAVGTLL 283

Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351
           GD  V  G  +  +++ Y  +     +++ +      A+ YA+ R V G  ++       
Sbjct: 284 GD--VHDGIAQMFQVIEYARMLVGTKAIATLSTGYLNALEYAKER-VQGPDMLQMGDKTA 340

Query: 352 -------QPVMKRAIADIALDIAAATAL--------SFRLANSFDEAKSRSEEAAYA--- 393
                   P ++R+   + L  A +  L        +F+       A++  E AA +   
Sbjct: 341 PRVTITHHPDVRRS---LMLQKAYSEGLRALVQYTATFQDTAHAHRAETGQEPAADSPAG 397

Query: 394 ------RIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  ++ P+ K    + A  ++  E+++  GGSG++++  + ++ R++  +++  G+
Sbjct: 398 LAERINDLLLPVVKGVGSERAWVLLGTESLQTFGGSGFLQDYPLEQYVRDAKIDTLYEGT 457

Query: 447 GNAMVLDVLN---LLEKGTNL 464
                 D      L ++GT L
Sbjct: 458 TAIQAQDFFFRKILRDQGTAL 478


>gi|158424811|ref|YP_001526103.1| putative acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331700|dbj|BAF89185.1| putative acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 393

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 23/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA++   +   D  Y L G K W  +  ++D + +  +     G   +  
Sbjct: 138 LSEADAGSDVAAMSCAARADGD-HYVLDGEKTWISNGGIADVYTVFVRTGEAPGTRGISA 196

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKIL 315
            +      G       + I     AT+  +      S   G       ++      M+ L
Sbjct: 197 FVVFADDPGFSIVERIDVIAPHPLATIRFDGCRIPASRRLGAAGEGFKIA------MRTL 250

Query: 316 -IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            I+  S   +  G  R +  EA+H+ R R + GG L D  + + A+ D+A ++  A  L+
Sbjct: 251 DIFRASVAAAALGFARRAFDEALHHVRSRRMLGGTLADLQLTQAALGDMAAELDGAALLT 310

Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +R A   D +    + EAA A++ A        +MA  VI  A++  GG G     ++  
Sbjct: 311 WRAAWRRDVQGLPTTREAAMAKMTA-------TEMAQRVIDRAVQLHGGRGVRSGETVEA 363

Query: 433 HYRESPANSILLGS 446
            YRE  A  I  G+
Sbjct: 364 LYREIRALRIYEGA 377


>gi|84515167|ref|ZP_01002530.1| isobutyryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84511326|gb|EAQ07780.1| isobutyryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 120/301 (39%), Gaps = 41/301 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + +  +A ++    T    + W P + S E  PT                TE   G
Sbjct: 257 GSLATRTEIAAELILCGGTEEQKQHWLPGLASAEILPTAV-------------FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGCFL---VP 259
           +D+ ++ ++  K  D         W   +  +    +LA+ +        +  FL    P
Sbjct: 304 SDLGSLRTRAVKKGDDWEITGNKTWITHATRTHVMTLLARTDPTTTDYSGLSMFLAEKTP 363

Query: 260 RLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILI 316
              E+  P  G+    ++  +G R     EL F    GF++   N+  G       +++ 
Sbjct: 364 GTDENPFPTPGMTGGEIE-VLGYRGMKEYELAFD---GFMVKGDNLLGGDTGKGFKQLMQ 419

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +SA +  +   V +A++     + YA+ R   G  LID P +   +A +A++I  A  
Sbjct: 420 TFESARIQTAARAVGVAQSALDVGMQYAQDRKQFGAALIDFPRVAGKLAMMAVEITIARQ 479

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A+  D  +    EA  A+++     + C          A++  GG+G+  E  I+
Sbjct: 480 LTYFSAHEKDNDRRCDLEAGMAKLLGARVAWACAD-------NALQIHGGNGFALEYKIS 532

Query: 432 R 432
           R
Sbjct: 533 R 533


>gi|83951727|ref|ZP_00960459.1| isovaleryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83836733|gb|EAP76030.1| isovaleryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 382

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 28/221 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + ++ +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAERRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L + S  G       +K+G R + T EL F N    F  +LG+          +++L
Sbjct: 187 TAFLIEKSMTGFSTSPHFDKLGMRGSNTAELIFDNVEVPFENVLGEEG------RGVRVL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + ++G     M   L E + Y   R   G  + +  +M+  IAD+   + +A
Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEIMPYLSERKQFGQPIGNFQLMQGKIADMYTAMNSA 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            A  + +A S D      ++AA            CC   PA
Sbjct: 301 RAYVYEVAKSCDRGAVTRQDAAA-----------CCLSMPA 330


>gi|332531250|ref|ZP_08407163.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
 gi|332039357|gb|EGI75770.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
          Length = 398

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 26/245 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++  K + G Y L G+K W  +SP++D F++ A+ E   G  L 
Sbjct: 137 FGLTEPDHGSDPDSMATRAHKTAGG-YRLKGNKMWISNSPIADVFVVWAR-EVSEGGQLG 194

Query: 259 P--RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           P    + D    GL    +  K+G +++ T E+   + F        ++    GP     
Sbjct: 195 PIRGFVLDKGMKGLSAPAVHGKVGLKASITGEIVMDDVFVPEDNAFPEVRGLKGP----- 249

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAA 368
               L+SA   ++   +  AE   +  R++V      G  L    ++++ +AD+  +I+ 
Sbjct: 250 -FTCLNSARYGIAWGALGAAEDCWFRARQYVLDRKQFGRPLAANQLIQKKLADMQTEISL 308

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 RL    DE  +  E       +  I K   C  A  V   A + +GG+G  +E 
Sbjct: 309 GLLGCLRLGRMKDEGTAAVE-------ITSILKRNSCGKALDVARLARDMMGGNGISDEF 361

Query: 429 SIARH 433
            +ARH
Sbjct: 362 GVARH 366


>gi|194377254|dbj|BAG63188.1| unnamed protein product [Homo sapiens]
          Length = 385

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 112/257 (43%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 124 VTEPGAGFDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 183 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 242 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 298 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 350

Query: 430 IARHYRESPANSILLGS 446
           + +  R++    I  G+
Sbjct: 351 VEKLMRDAKIYQIYEGT 367


>gi|297617420|ref|YP_003702579.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145257|gb|ADI02014.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 382

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 26/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256
           +TE   G+D+A I++  +K  D  Y L+G K F+++   +  + +LA ++     R  CF
Sbjct: 126 VTEPGAGSDVANISTSAKKDGD-YYILNGTKCFITNARYASKYAVLATLDKSKKHRGQCF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPV 309
                L D    G+   + + K+G R + T EL   N      + +G+      ++    
Sbjct: 185 F----LLDRDWEGISIGKSEKKMGMRCSDTSELILDNVKVHKKYRVGEEGDGFKIAMTAF 240

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +  I   S  ++     V    A  YA++R   G  + D   ++  +AD+A++I AA
Sbjct: 241 NSSRPFIAAASVGVATGAFEV----ARDYAKQRVAFGRPIADFQAIQFMLADMAMEIEAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A   D       EAA    ++ I+K +   +A  +  +A++ +GG G+  +  
Sbjct: 297 RLLWQKAAWQLD--NKHPLEAAQ---LSAISKCYAADIAMKIATDAVQILGGYGFCRDYP 351

Query: 430 IARHYRESPANSILLGS 446
             +  R++    I  G+
Sbjct: 352 AEKMMRDAKILQIFEGT 368


>gi|239817999|ref|YP_002946909.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804576|gb|ACS21643.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 397

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+AA+  + +   DG + L+G K W  +  ++D + + A+ +   G   +  
Sbjct: 136 LSEPDAGSDVAAMAMRAEATPDG-WRLNGEKTWISNGGIADFYCLFAKTDPTGGTRGITV 194

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL-I 316
            + D +  GL      + +     AT  L F +        LG+LN   G    M+ L I
Sbjct: 195 FIVDATTPGLDTSEHIDVMAPHPLAT--LRFQDCIVPRAAQLGELN--GGFKLAMRTLDI 250

Query: 317 YLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  S   +  GM R +LAEAI +A+ R + G  L D  + +  + ++A  I +A  L++R
Sbjct: 251 FRASVAAAALGMGRRALAEAIAHAKGRRMFGQTLADFQLTQAKLGEMAALIDSAALLTYR 310

Query: 376 LANSFDEAKSRSEEA 390
            A   D+A+ R   A
Sbjct: 311 AAWMRDDAEQRGAPA 325


>gi|194881310|ref|XP_001974791.1| GG21959 [Drosophila erecta]
 gi|190657978|gb|EDV55191.1| GG21959 [Drosophila erecta]
          Length = 627

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +DG  + L+G K W  +  +++   + AQ E           +V  F+V R    G  NG
Sbjct: 209 ADGKHFVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSF-GGVTNG 267

Query: 270 LCYQRLKNKIGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +      V++   N  G       V+   + + +  +    A +S +
Sbjct: 268 PPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGM---GATLSGT 324

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D  +K 
Sbjct: 325 -MKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKD 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA ++I A  + ++ C        EA++ +GG G++ +  + R  R+     I  G
Sbjct: 384 YHLEAAISKIYASESAWYVCD-------EAIQILGGMGFMVDTGLERVLRDLRIFRIFEG 436

Query: 446 SGNAMVL 452
           + + + L
Sbjct: 437 TNDILRL 443


>gi|254819508|ref|ZP_05224509.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 105/251 (41%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  ++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAGSMRTRAKADGDD-WILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISS 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHKDDEGFSVGPKEKKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKDRKQFGRPVSDNQGVQFMLADMAMKVESARLMVYH 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +S      +   ++  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AAARAERGES------HLGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|255940624|ref|XP_002561081.1| Pc16g07560 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585704|emb|CAP93426.1| Pc16g07560 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 542

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +  + +   DG  Y ++G K ++++ +   +   A   G+ G  
Sbjct: 266 ICLAITEPDAGSDVANLGCEAKLTEDGKHYIVNGEKKWITNGIYSDYFTTAVRTGKDGMN 325

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL +    G+  +R+  + G  S+ T  + F +       L+G  N      +  K
Sbjct: 326 GLSVLLIEREAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 378

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +++       +   I  V   RV   E++ YA +R   G  LID PV++  +A +A  I 
Sbjct: 379 VIMTNFNHERIGIVIQCVRFSRVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAHMARQIE 438

Query: 368 AA----TALSFRLANSFDEAKSRSEEAAYARIMAPITK--YWCCKMAPAVIAEAMECIGG 421
           A       + F+  +  D         A A + A  T+   +C + A  +        GG
Sbjct: 439 ATYNWLENIIFQCQSMEDTEAMLKLGGAIAGLKAQSTQCFEFCAREASQIFGGLSYSRGG 498

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV 451
            G      I R YR+  A +I  GS   M+
Sbjct: 499 QG----GKIERLYRDVRAYAIPGGSEEIML 524


>gi|254481175|ref|ZP_05094420.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038338|gb|EEB79000.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 410

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR---- 252
           + + +TE   G+D+A + +   +  D  + L+G K F+S+ + +D  ++ A+ +      
Sbjct: 141 LAVAMTEPDAGSDLAGMRASANE-QDDHWVLNGSKTFISNGINADLVVVAAKTDPENDPH 199

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FLV R +E     G    R   K+G ++  T EL F++     +   NV   P + 
Sbjct: 200 HMTLFLVERGME-----GFERGRNLKKMGMKAQDTAELFFNDV---KIPKDNVLGEPGKG 251

Query: 312 MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              L+       L  A   ++G ++S      Y + R   G  +      +  +A++  +
Sbjct: 252 FYYLMMGLAEERLLGAAGYLAGAQLSWDLTADYVKDRKAFGKPVAVFQNTQFKLAEMRTE 311

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     +   SF+E    + +AA A++       +  ++   V    ++  GG GY+
Sbjct: 312 LDIAQVYVDQCVKSFNEGSFTAVDAAKAKL-------YTSELQVKVAELGVQLHGGHGYM 364

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
           +E  I+R Y ++  ++I  GS   M L
Sbjct: 365 DEYPISRQYTDAKISTIYAGSSEIMKL 391


>gi|154252223|ref|YP_001413047.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156173|gb|ABS63390.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 385

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 114/284 (40%), Gaps = 53/284 (18%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S+VA    P V  +  PKI S E               + LGLTE RGG+D A + ++ 
Sbjct: 94  GSIVAAHARPEVADEIVPKICSGE-------------AIVALGLTEPRGGSDAAHLQTKA 140

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLC 271
           +   DG Y LSG K  +S +  +D  ++LA+ +      G V  FLVP      +P   C
Sbjct: 141 RADGDG-YVLSGEKTSISMAEQADYILVLARTDESNPGAGGVSAFLVPL----DAPGITC 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED--MKILIYLDSA---- 321
                + +G+++     + F N        +NVS+    GP  +   K++   D +    
Sbjct: 196 SSF--DDVGSKAVGRGSVFFDN--------VNVSSRYMVGPEGEGFRKVMQGFDYSRALI 245

Query: 322 -IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +  ++    SL E   Y   R   G  L     +   +A+    + AA  L ++     
Sbjct: 246 GLQCLAPAFASLEETWKYVTERVAFGNPLAKYQGVTEPLAEAQTLLEAARLLCYKTLWLR 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D     + EAA       + K+W  K A  VI   +   G  GY
Sbjct: 306 DNDLPHTAEAA-------MCKWWAPKTAFQVIHRCLLTHGHGGY 342


>gi|146307061|ref|YP_001187526.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina ymp]
 gi|145575262|gb|ABP84794.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina ymp]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGNKMWITNGPDANTYVIYAKTDINAGSRGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310
              + +    G    +  +K+G R + T EL F        N  G   G + V  +G   
Sbjct: 187 TAFIVERDFKGFSRHQKLDKLGMRGSNTCELVFEDCEVPEENILGSEGGGVRVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L    + IMS   M V L     Y   R      + +  +++  +AD+   + A+ 
Sbjct: 247 ERTVLSGGPTGIMSAC-MDVVLP----YVHERQQFKQSIGEFQLVQGKLADMYAGMNASK 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  +   ++AA A I+      +  +MA  +  + ++ +GG+GY  E   
Sbjct: 302 SYLYNVAKACDRGEESRKDAA-AVIL------YTAEMATKMALDTIQLLGGNGYTNEYPA 354

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 355 GRLLRDAKLYEIGAGT 370


>gi|108804881|ref|YP_644818.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766124|gb|ABG05006.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 404

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 27/276 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A++ +    + W P +          A M+K       GLTE   G+D+  + +  ++ 
Sbjct: 115 IAMLGSEEQKQRWLPSM----------ARMEKIGA---FGLTEPEHGSDVVMLETTARRE 161

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            D        KW  ++  +D  I+ A+   +G V  F+V R   + +      + +K K 
Sbjct: 162 GDEWVLDGRKKWIGNASFADLVIVWARDLSDGEVKGFVVER---EEAGEAFSAEVIKGKT 218

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIH 337
           G R+    E+E           L  +    +  K+L      +    V     +   A+ 
Sbjct: 219 GKRAVWQAEIELRGVRVPHENKLEGANSFKDTSKVLTATRYGVAWEGVGHAVAAYEAALA 278

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R +    L    +++  +A++  +I A   + FRLA  F++ K           MA
Sbjct: 279 YAKERRIFTRPLESYQLIQNKLANMLSEITAMQLICFRLAQLFEQGKMTGG-------MA 331

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + K    K A  V  EA + +GG+G + E  + +H
Sbjct: 332 SLAKMHTAKKARQVCLEARDILGGNGLLLEHVVGKH 367


>gi|294632223|ref|ZP_06710783.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835556|gb|EFF93905.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 401

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 45/280 (16%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261
           G+D++AI+S+  K  D  Y L+G K +L++  + + + +         EG      +   
Sbjct: 135 GSDVSAISSKAVKDGDE-YVLTGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTF 193

Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED 311
           L +  P       GL      +K+G +   T EL        ++  L +      G V  
Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPADRVLGGVTG 245

Query: 312 MKILIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                 +D      ++V+     +A+      + YA++R   G  +     ++  +A++A
Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRSTFGKPIAQHQAIQFKLAEMA 305

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+    A   D  +    EA  A       KY   +    V+ +A    GG G
Sbjct: 306 TKVEAAHAMMVNAARKKDSGQRNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
           + +E  I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|295666560|ref|XP_002793830.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226277483|gb|EEH33049.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 430

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 52/276 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ +  + + DG Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 151 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + + +  G    R  +K+G R + T EL F + F     +LG++N        +K+L
Sbjct: 210 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFDDVFVPQENVLGEVN------RGVKVL 263

Query: 316 IY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------------------DQPV-- 354
           +  LD   + +S   +        A +R    G  I                  D P+  
Sbjct: 264 MEGLDLERLVLSAGPLGGKRGEGKAGKREAGSGSKIRTNTLDLVLPYTHTRKQFDAPIAH 323

Query: 355 ---MKRAIADIALDIAAATALSFRLANSFDEAKS----------RSEEAAYARIMAPITK 401
              ++  +AD+   ++A+ A ++  A   DEA +          R ++ A A + A    
Sbjct: 324 NQLIQGKLADMYTKLSASRAYTYTTARQIDEAAASDSASSNNAIRKQDCAGAILYAAERA 383

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             C         +A++ +GG+GY+ E    R  R++
Sbjct: 384 TECA-------LDAIQLMGGNGYVNEIPAGRLLRDA 412


>gi|195352258|ref|XP_002042630.1| GM14915 [Drosophila sechellia]
 gi|194124514|gb|EDW46557.1| GM14915 [Drosophila sechellia]
          Length = 398

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 31/214 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  ++ +  +K  DG  Y ++G K W  +S ++  F++ A  +   G   
Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
           +   + D    GL   + ++K+G R++ T +L F N          TFG        + G
Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
                    +L+   + ++   V LA+      I Y   R   G  + +   M+  IA +
Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           A +I AA  +++  A   ++     +EAA A+++
Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMAQVL 353


>gi|62510496|sp|Q8HXY8|ACADM_MACFA RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|23574692|dbj|BAC20580.1| Medium-chain acyl-CoA dehydrogenase [Macaca fascicularis]
          Length = 421

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   +  + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKASWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRC--------SDTRGIVFEDVKVLKENVLIGDGAG 269

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D    +VS   V LA     EA  YA  R   G +LI+   +   +A++A+ 
Sbjct: 270 FKIAMGAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMK 329

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 330 VELARMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFN 382

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 383 TEYPVEKLMRDAKIYQIYEGT 403


>gi|118471836|ref|YP_889092.1| FadE121 [Mycobacterium smegmatis str. MC2 155]
 gi|118173123|gb|ABK74019.1| FadE12_1 [Mycobacterium smegmatis str. MC2 155]
          Length = 402

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 73/278 (26%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
            G+TE   G D + IT+  ++  D     Y ++G K ++S  + S+  ++L + E R   
Sbjct: 130 FGVTEPGAGLDTSRITTFARRDGDHPDADYVVNGRKVWISKALESEKILLLTRTESR--- 186

Query: 256 FLVPRLLED-----GSPN-GLCY-----------QRLKNKIGNRSNATVEL--------- 289
                  ED     G P  GL              R  NK+G  + ++ EL         
Sbjct: 187 -------EDVEKRGGKPTEGLSLFLTDLDRDHVDIRPINKMGRNAVSSNELFIDDLRVPV 239

Query: 290 -----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                E    FG++L  LN         ++LI    A  ++   RV+L  A+ YA  R  
Sbjct: 240 EHRIGEEGKGFGYILHGLNPE-------RMLI----AAEALGIGRVALDRAVKYANDR-- 286

Query: 345 SGGILIDQPV-MKRAI----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
              ++ D+P+ M + I    AD    + AA  +  +    +D  K    EA  A      
Sbjct: 287 ---VVFDRPIGMNQGIQFPLADSLARLDAAELVLRKATWLYDNGKPCGREANMA------ 337

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            KY C     A    A++  GG GY EE +I+R +RES
Sbjct: 338 -KYLCADAGFAAADRALQTHGGMGYSEEYNISRFFRES 374


>gi|27366930|ref|NP_762457.1| Isovaleryl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
 gi|27358497|gb|AAO07447.1| Isovaleryl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +   ++ A+   +     +
Sbjct: 130 LAMSEANSGSDVVSMQLKAKEKGDH-FVLNGSKMWITNGPDAHTLVVYAKTNPKAEAHGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R      P     Q+L +K+G R + T EL F +       +LG++N       
Sbjct: 189 TAFIVERAF----PGFHSAQKL-DKLGMRGSNTSELVFEDCLVPKENVLGEIN------H 237

Query: 311 DMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +++L+  LD   + ++G     MR  L   I Y   R   G  + +  +++  +AD+  
Sbjct: 238 GVRVLMSGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAARSYVYTVAAACDRGEVTRKDAAGVIL-------YSAELATRMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    R  R++    I  G+
Sbjct: 351 VNEFPTGRLLRDAKLYEIGAGT 372


>gi|300022256|ref|YP_003754867.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524077|gb|ADJ22546.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 388

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 27/230 (11%)

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQ 273
           +S   Y L+G K F+++   +D++++ A         G+  C ++P   E     GL + 
Sbjct: 142 VSPDCYSLTGSKVFVTNGAHADSYVVSAVAGDRGAPAGQFSCVVIPNNSE-----GLTWG 196

Query: 274 RLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  + IG R N++       V +  +N  G   GD       V     L+ + +  + VS
Sbjct: 197 KPWDGIGMRGNSSRTMTLQDVRIPRANLLG-REGDQIWYIFNVITPFFLVAMAATYLGVS 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
              ++ A  +H  RR+HV  G L   PV++     +   +     L +  A SFD     
Sbjct: 256 DSALNEAR-MHVMRRQHVHTGGLSGAPVIQHRFGKLWGMLDRTRRLVYGAAASFDNG--- 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +  A   IMA  +K      A  ++ E+M   GG GY E   ++RH R+
Sbjct: 312 -DPDALISIMA--SKAEVADSAVEIVNESMTLTGGRGYSEGSKLSRHLRD 358


>gi|196009197|ref|XP_002114464.1| hypothetical protein TRIADDRAFT_27663 [Trichoplax adhaerens]
 gi|190583483|gb|EDV23554.1| hypothetical protein TRIADDRAFT_27663 [Trichoplax adhaerens]
          Length = 424

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 123/281 (43%), Gaps = 33/281 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              IG L ++E   G+D+ ++  + +K  D  Y L+G K
Sbjct: 150 YLPKLISGEY--------------IGALAMSESGSGSDVVSMRLKAEKKGD-YYILNGSK 194

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P +D  ++ A+ +       +   L + +  G       +K+G R + T EL F
Sbjct: 195 FWITNGPDADVLVVYAKTDPSAKQRGITTFLIEKNMPGFSTAPKLDKLGMRGSNTCELIF 254

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMS---VSGMRVSLAEAIHYARRRHVS 345
            +     + +  +  G  + + +L+    L+  +++   V  M+ ++  A  Y  +R   
Sbjct: 255 EDC---KVHESQIMGGSGKGVYVLMSGLDLERLVLAAGPVGLMQAAVDVAYPYVHQREQF 311

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              +    +++  +AD+ + + +  +  + +A + D  +  S + A   +       +C 
Sbjct: 312 NTKIAQFQLIQAKMADMYVKLNSCRSYLYNVARACDAGRIVSRDCAGVIL-------YCA 364

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  V  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 365 EAATKVALDALQLLGGNGYINDYPTGRILRDAKLYEIGAGT 405


>gi|193706910|ref|XP_001952123.1| PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 419

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 34/277 (12%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TE   G+D+ A+ ++  K  D  Y ++G K W  +  +++ + +LA+ +      + P
Sbjct: 155 GVTEPGAGSDVNALKTKAVKKGDE-YIINGQKMWITNGGVANWYFVLARTD------MDP 207

Query: 260 R---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           +          + D    GL   R +  +G +++ T  + F +     +   NV T   +
Sbjct: 208 KAPASKAFTGFIVDADTPGLTPGRKELNMGQKASDTRGITFEDV---RVPKENVLTAEGQ 264

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +   D     V+   V LA     EA  Y+  R   G  +     +   +AD+A+
Sbjct: 265 GFKIAMATFDKTRPPVAAGAVGLAQRALDEAAKYSLERKAFGVPIAKHQAVAFMLADMAI 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A     + A   D+ +  S         A I+K +   +A     +A++  GG+G+
Sbjct: 325 GIEGARLTYMKAAYEVDQGRRNS-------YYASISKAYAADVANKCATDAVQIFGGNGF 377

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEK 460
             E  + +  R++    I  G+     L +  +++EK
Sbjct: 378 NTEYPVEKLMRDAKIYQIYEGTAQIQRLIISRDIIEK 414


>gi|118463344|ref|YP_884186.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118164631|gb|ABK65528.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 25/261 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIML---AQVEGRVG 254
           + LTE  GG+D+  + +      +G     ++G K ++S+      I L      + R  
Sbjct: 122 MALTEPGGGSDLQNMITTALPAGNGESELVINGAKTWISNARRSGLIALLCKTDPKARPQ 181

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
              +  LL +  P GL   R   K+G +   + EL F         +LG      G  + 
Sbjct: 182 HSGISILLVEHGP-GLTVSRDLPKLGYKGVESCELSFDGCRVPASAVLGG-EPGRGFAQM 239

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           MK L    I + S  + V+    +L +A+ YA++R   G  +     +   +AD+A  + 
Sbjct: 240 MKGLETGRIQVASRALGVA--TAALEDALAYAQQRESFGKPIWKHQSISNYLADMATKLT 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+   A+ +D  +    EA  A++ A        ++A  +   A+   GG GY  E
Sbjct: 298 AARQLTLHAADRYDAGERADMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSTE 350

Query: 428 RSIARHYRESPANSILLGSGN 448
             + R++R++P   +++G G 
Sbjct: 351 YDVERYFRDAPL--MIVGEGT 369


>gi|319951477|ref|ZP_08025286.1| acyl-CoA dehydrogenase-like protein [Dietzia cinnamea P4]
 gi|319434869|gb|EFV90180.1| acyl-CoA dehydrogenase-like protein [Dietzia cinnamea P4]
          Length = 404

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 50/286 (17%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   +G + +TE   G+D+ A+ +   +  D  + ++G K F+S+ M  D  +++A
Sbjct: 136 PKLATGEMVGAIAMTEPGAGSDLQALRTTATRDGDD-FVVNGSKTFISNGMHCDLLVIVA 194

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  G     L   + E     G    R  +KIG +   T+EL F         D+ V  G
Sbjct: 195 RTGGEGAQGLSLLVAETPGLEGFNRGRKLDKIGLKYQDTMELFFD--------DMRVPAG 246

Query: 308 PV------------------EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            +                     +++I + +   + + +R+    A  YA+ R   G  +
Sbjct: 247 NILGGEGQEGQGFIQLMQQLPQERLIIAVTAVAAAETAVRL----ATDYAKEREAFGKPI 302

Query: 350 IDQPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
           +    ++  +A+   +  AA  L     S  L    D A             A + KY+C
Sbjct: 303 LKFQNLRFELAECKTEALAARTLLDHCISLHLKGELDPA------------TASMAKYYC 350

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 +I   ++  GG G++ E  IAR Y  +    I  G+   M
Sbjct: 351 TDKQCEIIDRCLQVFGGYGFMTEYPIARMYASARVQKIYGGTNEIM 396


>gi|299134538|ref|ZP_07027730.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590348|gb|EFI50551.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 407

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 120/281 (42%), Gaps = 22/281 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M K  +    GLTE   G+D  ++ ++ +K+  G     G  W   +P++D  ++ A+ +
Sbjct: 142 MAKGEILGCFGLTEPDHGSDPGSMKTRAKKVPGGYRLTGGKTWITHAPIADIMVVWAKDD 201

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             V   +   +LE G   GL   +++NK   R++ T ++   + F   + + N+  G V+
Sbjct: 202 QDV---IRGFILERGMA-GLSTAKIENKFSVRASPTGQIFMEDVF---VPEENLLPG-VQ 253

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K     L++A   +    +  AE     A  Y+  R   G  L    ++++ +AD+  
Sbjct: 254 GLKGPFGCLNNARFGIIWGAMGAAEFCWHAARQYSMDRKQFGRPLAANQLIQKKLADMQT 313

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I+        ++   D  K+  E       M  + K  C   A  +   A +  GG+G 
Sbjct: 314 EISIGLLACLHVSRLRDAGKATPE-------MLSLLKRNCAGKALDIARAARDIHGGNGI 366

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +E  + RH       + L G+ +   L VL   + G + F
Sbjct: 367 SDEYHVIRHLMNLETVNTLEGTHDIHAL-VLGRAQTGISAF 406


>gi|193652742|ref|XP_001942523.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 3 [Acyrthosiphon pisum]
 gi|328705315|ref|XP_003242761.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Acyrthosiphon pisum]
          Length = 403

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 32/307 (10%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGL----GLTEKRGGTDIAAITSQGQKISDGI 225
           +H      I +R   P  K       ++ G+     L+E   G+D A + +  ++  D  
Sbjct: 106 IHNALYAGIINRVGTPEQKLQFLPDFISRGIVGCFALSEPGSGSDAANMHTIAKREGDH- 164

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  +     A I++A+ +       V  F+VP      +P GL   +  +K+
Sbjct: 165 WILNGTKAWVTNGIEGGAIIVMARSDIFKGHNGVSAFIVP----TNTP-GLTKGKRDDKL 219

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA--- 335
           G R+ ++  +   N    ++   N+     +  KI +  +D A + ++   + +++A   
Sbjct: 220 GIRAASSCNIILDNV---IVPAENMLGNEGDGFKIAMSGIDLARIGIASQALGISQAAMD 276

Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             I YA  R   G  +I    +++ +A +A  + A+  L+++ A   D  +  ++ A+ A
Sbjct: 277 CAIDYAGNRTAFGNAIIKLSAVQQRLAKMATRLEASRLLTWKAAWLRDNNQPFTKAASMA 336

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++ A  T  +       V    ++ +GG GYI +    RHYR++    I  G  +   L 
Sbjct: 337 KLEASQTATY-------VTHNCIQILGGIGYIADMPAERHYRDARITEIYAGPTDIQYLV 389

Query: 454 VLNLLEK 460
           +   L K
Sbjct: 390 IAEKLAK 396


>gi|109008499|ref|XP_001101187.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Macaca mulatta]
          Length = 454

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   +  + +LA+ +          
Sbjct: 193 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKASWYFLLARSDPDPKAPANKA 251

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 252 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDV---KVPKENVLIGDGAGFKIAM 307

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +VS   V LA     EA  YA  R   G +LI+   +   +A++A+ +  A 
Sbjct: 308 GAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVELAR 367

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 368 MSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPV 420

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 421 EKLMRDAKIYQIYEGT 436


>gi|308490217|ref|XP_003107301.1| CRE-ACDH-9 protein [Caenorhabditis remanei]
 gi|308252407|gb|EFO96359.1| CRE-ACDH-9 protein [Caenorhabditis remanei]
          Length = 409

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 38/269 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQ---VEGRVGCF 256
           LTE   G+D A+I +   K  D  Y ++G K F+S   +  + F+M+ Q     G  G F
Sbjct: 146 LTEPDAGSDAASIRTTATKKGD-YYVVNGSKAFISGAGTSDNYFVMMRQDGAAPGAKGIF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNV 304
            +  ++E+G+  G  + + ++K+G  S  T  L F +             FGF     N+
Sbjct: 205 CL--MIENGT-EGFSFGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGF-----NI 256

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   +   ++ I    A  S+   + SL  AI + + R   G  L D    +  +A++A 
Sbjct: 257 AMAGLNGGRVNI----ASCSLGAAQRSLDLAIEHLKCRKQFGKTLSDFQYNQFKLAELAT 312

Query: 365 DIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  +  +    A   D +   +    A A++ A    +        V+  A++  GG G
Sbjct: 313 KLYTSRLIVRNAAEQLDNDLPEKVALCAMAKLHATDNCF-------DVVNGALQMFGGYG 365

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           ++++  I ++ R+   + IL G+   M L
Sbjct: 366 FLKDYPIQQYLRDIRVHQILEGTNEMMRL 394


>gi|76803447|ref|YP_327716.1| acyl-CoA dehydrogenase 8 [Natronomonas pharaonis DSM 2160]
 gi|76559262|emb|CAI50870.1| acyl-CoA dehydrogenase 8 [Natronomonas pharaonis DSM 2160]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 23/246 (9%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VE 250
           A+G  GLTE   G++  A+ +Q +K  D  Y L+G K W  +SP++D  ++ A+     +
Sbjct: 124 AVGCFGLTEPEHGSNPTAMETQAEKDGDE-YVLNGSKTWITNSPIADVAVVWARDTSADD 182

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             V  FLV     +   +G+   ++  K+  R++ T E+   N       +L ++    G
Sbjct: 183 TPVRGFLV-----ETDRDGVTTNKIDEKLSLRASITGEIGLQNVRVPETNVLPEVEGMKG 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           P+  +    Y   A  ++   R     A  YA  R   G  +    + +  +A++A  I+
Sbjct: 238 PLSCLTQARY-GIAWGAIGAARDCFETAREYATDREQFGTPIGQFQLQQDKLAEMATQIS 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L+ RLA   +    R +  +       ++K    +MA      A E +GG+G   +
Sbjct: 297 LAQLLAHRLAELKERGDMRPQHVS-------MSKRNNVRMARNQSRIAREMLGGNGITAD 349

Query: 428 RSIARH 433
            S  RH
Sbjct: 350 YSPMRH 355


>gi|296171793|ref|ZP_06852921.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295893964|gb|EFG73731.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 386

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 130/320 (40%), Gaps = 54/320 (16%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + +  ++AL T  +  + W PK  + E             +   + +TE   G
Sbjct: 93  GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------IITAIAMTEPGTG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   G      L+ +   
Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGAKTFITNGINADLVIVVAQTDPDKGAQGFSLLVVERGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAI 322
            G    R  +KIG  +  T EL F+        D+ V   P E++        IYL   +
Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFT--------DVKV---PAENLLGQEGMGFIYL---M 243

Query: 323 MSVSGMRVS------------LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            ++   R+S            LA+ + Y + R   G  +      +  +A++A +     
Sbjct: 244 QNLPQERISIAIMAAAAMEQVLADTLQYTKERKAFGKPIGSFQNSRFVLAELATEATVVR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +         + +  +E+AA A       K++  +    +I   ++  GG GY+ E  +
Sbjct: 304 IMVDEFIRLHLDKQLTAEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYPV 356

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR Y ++   +I  G+   M
Sbjct: 357 ARAYLDARVQTIYGGTTEIM 376


>gi|289625122|ref|ZP_06458076.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867993|gb|EGH02702.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205
           H+++    S    ++  +   H +      +R   P  KA   P   +   IG L ++E 
Sbjct: 74  HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHIGALAMSEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ ++  +  K  D  Y L+G K W  + P ++ +++ A+ + +     +   + +
Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317
               G       +K+G R + T EL F        N  G L G + V         ++  
Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGTLDGGVRV---------LMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +SG     M+  +   + Y       G  + +  +++  +AD+   + A+ A 
Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDPKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  +A++ +GG+GYI E    R
Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|158523113|ref|YP_001530983.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511939|gb|ABW68906.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 364

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 123/307 (40%), Gaps = 67/307 (21%)

Query: 155 SVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +VT+ S+    VA M T    K + P     EY             A  + L E R G D
Sbjct: 89  AVTAPSLFITPVAKMGTEDQKKKYLPLFCKEEY------------AACTMALNEPRFGFD 136

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
              + +  +K   G Y L+G K F+  PM   +   ++ A ++G+   F+V     D   
Sbjct: 137 AVDLKTTAEK-KGGAYVLNGEKCFV--PMGANASHMLVAANLDGKSQLFIV-----DTKN 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST------------GPVEDMKIL 315
            G+       K+G+R           T G    ++N               G  E     
Sbjct: 189 PGV-------KMGDREK---------TLGMYALEMNRVVFENCEVPAEDRLGGEEGCDFD 232

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDIAAAT 370
            +L  + + ++ M   +  A +   R +    +   QP+  R      +A++A ++ +  
Sbjct: 233 AFLQRSRVGMAAMAAGVTNASYLFAREYAKTRVQFGQPIAYRQSVAFMLAEMAYEVDSIR 292

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++++ A++ +  K+ + EA  A++       +  +MA  +    ++ +GG GYI E  +
Sbjct: 293 LMAWKAASALEAGKNATREAYLAKM-------YAGEMAMKMCDYGVQLMGGHGYIREYPV 345

Query: 431 ARHYRES 437
            R+YR +
Sbjct: 346 ERYYRNA 352


>gi|332654387|ref|ZP_08420130.1| butyryl-CoA dehydrogenase [Ruminococcaceae bacterium D16]
 gi|332516351|gb|EGJ45957.1| butyryl-CoA dehydrogenase [Ruminococcaceae bacterium D16]
          Length = 380

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
            GLTE   GTD  A   Q   + +G  Y L+G K F+++  ++   ++ A  + + G   
Sbjct: 123 FGLTEPNAGTD--ASGQQTTAVLEGDHYVLNGSKCFITNGTVASTMVVFAMTDPKAGNHG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + + S  G    + + K+G R ++T +L F +    ++   N+     +  KI + 
Sbjct: 181 ISAFIVESSFPGFSVGKKEKKMGIRGSSTCDLIFEDC---IVPKENLLGKEGQGFKIAMQ 237

Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + ++   + L E     A+ Y + R      L      +  +AD+   + AA  
Sbjct: 238 TLDGGRIGIAAQALGLGEGAIDEAVKYTQERIQFKKRLSQFQNTQFQLADMHTRMKAAQY 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A   +  +  S +AA A++ A        + A  V   A++  GG GY  E  + 
Sbjct: 298 LVYAAACKKENHEPYSVDAAMAKLFA-------AEAASDVTRRAVQLFGGYGYTREYPVE 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RMMRDAKITEIYEGT 365


>gi|331673250|ref|ZP_08374018.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
 gi|331069448|gb|EGI40835.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
          Length = 401

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D S  G+    L +KIG    +T       VE+E S+  G
Sbjct: 185 VLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDMVG 243

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 244 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 298

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 299 QEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVIDDA 351

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 352 IQIMGGLGYTDEAHVSRFWRDVRCERIGGGTDEIMI 387


>gi|312141576|ref|YP_004008912.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677204|ref|ZP_08156870.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890915|emb|CBH50234.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551901|gb|EGD21597.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 385

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 130 LSEREAGSDAASMRTRAKADGDE-WILNGSKCWITNGGQSTWYTVMAVTDPDKGANGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G     L++K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 189 FMVHKDDEGFVVGPLEHKLGIKGSPTAELYFENC--RIPGDRIIGEPGTGFKTALETLDH 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    + LA+     A+ Y + R   G  + D    +  +AD+A+ I +A  + + 
Sbjct: 247 TRPTIGAQALGLAQGAFDAAVAYTKDRKQFGKSIADFQNTQFMLADMAMKIESARLMVYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K     +A  V   A++  GG+GY  +  + R  R
Sbjct: 307 AA-----ARAERGEKNLGFISAA-AKCLASDVAMEVTTNAVQLFGGAGYTTDFPVERMMR 360

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 361 DAKITQIYEGT 371


>gi|320007517|gb|ADW02367.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 401

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEG-----RVGCF 256
           G+D++AI+S+G +  D  Y L G K +L++  S   + +         EG      +  F
Sbjct: 135 GSDVSAISSKGVREGD-EYVLDGQKMWLTNGGSSTLVAVLCRSDEGHPEGTAPHKSMTTF 193

Query: 257 LVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313
           LV +    G    GL      +K+G +   T EL      G  +    V  G       +
Sbjct: 194 LVEKEAGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGTTGRGFYQ 250

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  ++   ++V+     +A+      + YA++R   G  +     ++  +A++   + A
Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRETFGKPIAQHQAIQFKLAEMGTKVEA 310

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+    A   D  +    EA  A       KY   +    V+ +A    GG G+ +E 
Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460
            I R YRE+P   +L+G G A +  ++    LLE+
Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396


>gi|239918776|ref|YP_002958334.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281414998|ref|ZP_06246740.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239839983|gb|ACS31780.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 408

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 27/257 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      A+G  GLTE   G+D A++T+  ++   G + L G K W   + ++D  I+ A
Sbjct: 131 PRMTIGEAVGCFGLTEPGAGSDPASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWA 190

Query: 248 QV----EGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFL 298
           Q     +GR V  F+VP         G   + +  K+  R++   E+            L
Sbjct: 191 QTGEPGDGRGVRGFVVPT-----DTPGFRAEAITQKLSMRASVQCEIHLDGVRLPASAML 245

Query: 299 LGDLNVS-TGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMK 356
             D  V   GP + +    Y    I    G  R S    + YA  R   G  L    + +
Sbjct: 246 PADSAVGLKGPFQCLNEARY--GIIWGAMGAARDSFDAVLDYAMERQQFGVPLASHQLTQ 303

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I     L+ ++  + D              M    K   C++A  +  EA 
Sbjct: 304 AKLADMAVAIGKGYLLAHQIGRAKDAGP-------LTPAMISAGKLDNCRVAIGIAREAR 356

Query: 417 ECIGGSGYIEERSIARH 433
           E +GG+G   E S  RH
Sbjct: 357 EMLGGNGITLEHSPLRH 373


>gi|126739718|ref|ZP_01755410.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719364|gb|EBA16074.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T     +W PKI S E  PT          A+    TE   G
Sbjct: 256 GSLGTRSEIAAELILCGGTEEQKANWLPKIASAEILPT----------AV---FTEPNTG 302

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 303 SDLGSLRTRAVKDENGDYKITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKA 362

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   E   P  G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 363 PGTDEQPFPTEGMTGGEIE-VLGYRGMKEYELGFD---GFHVKGENLLGGEENKGFKQLM 418

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A++     + YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 419 ETFESARIQTAARAIGVAQSALDIGMQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMVAR 478

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 479 QLTYFSAWEKDNGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFAMEYKI 531

Query: 431 AR 432
           +R
Sbjct: 532 SR 533


>gi|159035708|ref|YP_001534961.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157914543|gb|ABV95970.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 41/282 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDA--FIMLAQVEG--- 251
            GLTE   G+D     +Q + + D     + ++G K F+++  +D    + +  V G   
Sbjct: 123 FGLTEPGFGSDAGG--TQTRAVLDETTDEWVINGAKAFITNSGTDITDLVTVTAVTGTRP 180

Query: 252 ----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
                +   +VP     G+P G       +K+G  ++ T EL F +     G LLG+   
Sbjct: 181 DGSKELSTIIVP----TGTP-GFTVAPGYSKVGWTASDTHELTFDDCRVPAGNLLGERGR 235

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
                   + L  LD   ++++ + V LA     E++ YAR RH  G  +     ++  I
Sbjct: 236 GFA-----QFLRILDEGRIAIAALAVGLAQGCVDESVRYARERHAFGRPIGSNQAIQFKI 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ L +  A     RLA  +D A+       + R  A I K     +A     +A +  
Sbjct: 291 ADMELRVHTA-----RLAY-YDAAQRMLAGEPFKR-QAAIAKLHASTIAVDNARDATQIH 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG G++ E  +AR +R+  A  + +G G + V  ++   E G
Sbjct: 344 GGYGFMNEFPVARFWRD--AKILEIGEGTSEVQRMIIARELG 383


>gi|88704950|ref|ZP_01102662.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88700645|gb|EAQ97752.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 381

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 36/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  I +    ++DG  Y ++G K F+++   +D  +++ + +   G   
Sbjct: 124 IAMTEPGTGSDLQGIRTHA--VADGDEYVINGSKTFITNGQHADLVVVVCKTDPEAGAAG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
              +L +    G    R   K+G ++  T EL FS+               F +L+ +L 
Sbjct: 182 TSLILVEADRAGFEKGRNLEKVGMKAQDTSELFFSDVRVPRENLLGEEGKGFVYLMQEL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + I       IM+++   V L + I Y + R   G  +      +  +A++ 
Sbjct: 241 ----PQERLSI------GIMAMAASEVCLRQTIDYVKERQAFGKPIAALQNTQFKLAELD 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ +A     R        +  +  A+ A+++    +   C+    ++ E ++  GG G
Sbjct: 291 TELTSAQVFMDRCLELLVAGQLDTVTASKAKLLGSELQ---CR----IVDECVQLHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y+ E  +AR + +S    I  G+   M L
Sbjct: 344 YMWEYPVARAFADSRVQRIYGGTSEVMKL 372


>gi|300938981|ref|ZP_07153679.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           21-1]
 gi|300456084|gb|EFK19577.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           21-1]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+     +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTHKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 168 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 224

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 225 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 280 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 333 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|297157918|gb|ADI07630.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 386

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 28/273 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ +S+ + ++A
Sbjct: 114 APLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGDH-YVLNGVKRWITNAGVSEYYTVMA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304
             +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +   
Sbjct: 173 VTDPDKRSKGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAE 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
            TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +
Sbjct: 231 GTGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFML 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVIA 413
           AD+A+ + AA  L++        A +RSE  A       +T      K +    A  +  
Sbjct: 288 ADMAMKLEAARQLTY-------AAAARSERVAAGSGKEDLTFFGAAAKCYASDAAMEITT 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 341 DAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 373


>gi|288921878|ref|ZP_06416092.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288346773|gb|EFC81088.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 383

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 24/261 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE + G+D+  I +   +  D  + ++G K F+++  ++D  I++A+     G    
Sbjct: 126 IAMTEPQTGSDLRGIATTAVRDGDD-WVINGSKTFITNGILADLVIVVARTGTDGGSRSF 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLN--VSTGPV 309
              + +    G    R  +K+G  +  T EL F        N  G   G L   +   P 
Sbjct: 185 SLFVVERDTPGFERGRKLDKVGLAAQDTAELFFRDVRVPAGNMLGVEGGGLPALMRNLPR 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E + I      AI        + A  + Y R+R   G  + +   +  A+A++   I   
Sbjct: 245 ERLGI------AIAGQCSAEAAFAWTLDYVRQRQAFGRPVAEFQTVGFALAELRTRIEVT 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   R     +     + +AA A       K+W  +M   V+   ++  GG GY+ E  
Sbjct: 299 RAYIDRCVRELNRGTLSAVDAAKA-------KWWATEMQWKVVDTGVQLHGGYGYMTEYP 351

Query: 430 IARHYRESPANSILLGSGNAM 450
           IAR + ++    I  G+   M
Sbjct: 352 IARAFLDARVQRIYGGTNEIM 372


>gi|15922116|ref|NP_377785.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15622904|dbj|BAB66894.1| 374aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 374

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 35/273 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------EG 251
           G GL+E   G+D  +I ++ ++I  G + ++G K W      +D F+++A+       E 
Sbjct: 108 GFGLSEPCCGSDAGSIITKAERIK-GSWIINGRKMWTTQGLYADIFLIVARTGDPKLKEK 166

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FLVPR       N     R    +GNR   T E+E ++     +G+ N+       
Sbjct: 167 TLTVFLVPR-------NKCITTRKIEVMGNRGTGTAEVELNDCE---VGEENIVGELNGG 216

Query: 312 MKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +++ Y L    +++S + + L+     EAI +++ R +    LI++         I   
Sbjct: 217 WRVVKYALLVGRIAISAIAIGLSICAIEEAIQWSKHRELFDSKLIEKQ-------GIQWY 269

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSG 423
           +A + A  + + +   E      +  +  I   I+  K+    +A  +I  A++ +GG G
Sbjct: 270 LAKSVANLYSIKSMIREISKYPLDRLF-EIEGKISALKFVSSNVAENIIDTALQIMGGLG 328

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y +   + R +R+     I  G+ + + L ++N
Sbjct: 329 YAKGSKVERAFRDVRLTRIGEGT-DEVQLSIIN 360


>gi|307306781|ref|ZP_07586522.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|306902072|gb|EFN32670.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 387

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLKADKRGD-RYVLNGSKMWITNGPDADVLVVYAKTDPAAGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L + +  G       +K+G R + T EL F++     + + NV  G  E +K+L+  
Sbjct: 187 TAFLVEKAFPGFSAGHKLDKLGMRGSNTSELIFTDC---EVPEENVLGGVGEGVKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +S      M   L   + Y   R   G  + +  +M+  +AD+ + + AA A 
Sbjct: 244 LDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQGKLADMYVTMNAARAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A A+  EA++ +GG+GY  +    R
Sbjct: 304 VYAVAAACDRGETARKDAAGCIL-------YAAEKATAMALEAIQALGGNGYTNDYPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|281337334|gb|EFB12918.1| hypothetical protein PANDA_005059 [Ailuropoda melanoleuca]
          Length = 364

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 22/253 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255
           LTE   G+D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G     C
Sbjct: 123 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFVSGGGESDIYVVMCRT-GEPGPKGISC 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKI 314
            +V    E G+P GL + + + K+G  S  T  + F +    +   + N   G +  MK 
Sbjct: 181 IIV----EKGTP-GLSFGKKEKKVGWNSQPTRAMIFEDCTVPVANRIGNEGQGFIIAMKG 235

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    ++ A  S+     S+     Y   R   G  L     ++  +AD+A  + A+  L
Sbjct: 236 LNGGRINVASCSLGAAHASVVLTRDYLSVRKQFGESLASNQYLQFKLADMATRLVASR-L 294

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R A     A +  EE   A ++  + K +      A+  +A++  GG GY+++ ++ +
Sbjct: 295 MIRNA-----AVALQEEREDAVVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQ 349

Query: 433 HYRESPANSILLG 445
           + R+S  + IL G
Sbjct: 350 YVRDSRVHQILEG 362


>gi|229488410|ref|ZP_04382276.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323914|gb|EEN89669.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 25/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++   + +  ++  D  + L+G K W  +  ++D  ++ A
Sbjct: 124 PRMAAGEAIGCFGLTEPDFGSNPGGMRTNAKRDGDD-WILNGTKMWITNGSIADVAVVWA 182

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +  V  F+VP         G     +KNK+  R++ T EL   +       +L     
Sbjct: 183 RTDDGVRGFVVPT-----DTPGFSAPEIKNKMSLRASVTSELVLEDVRLPASAMLPKARG 237

Query: 305 STGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            +GP+    + +  I   +    +   R  L  AI YAR R V    L    + +  IAD
Sbjct: 238 LSGPLGCLNEARFGIIFGA----MGAARDCLETAISYARDRKVFDKSLAAYQITQAKIAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+++     L+  L    D    R E+ +  ++          + A  +  E    +G 
Sbjct: 294 MAVELGKGQLLAIHLGRLKDAGTVRPEQVSTGKLNN-------VREAIKIARECRTILGA 346

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 347 NGITLEYPVIRH 358


>gi|225685187|gb|EEH23471.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 388

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 22/182 (12%)

Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254
            GLTE   G+D  ++   ++      G Y +SG K W  +SP+SD F++ A++E  G++ 
Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F++ R  +   P  L    +KNK   R++ T  ++  +       +  D+    GP   
Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQMDSCPVPEANMFPDVEGLKGP--- 278

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365
                 L+SA + ++ G   +L + I  AR     R+   G  L    ++++ +AD   D
Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARSYALERKQFKGNPLAKYQLVQKKLADATTD 335

Query: 366 IA 367
            A
Sbjct: 336 AA 337


>gi|156359967|ref|XP_001625034.1| predicted protein [Nematostella vectensis]
 gi|156211846|gb|EDO32934.1| predicted protein [Nematostella vectensis]
          Length = 431

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 116/275 (42%), Gaps = 22/275 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG++E   G+D+A+I +   K  D      G  W  +   +D   +LA  +     F   
Sbjct: 167 LGVSETGAGSDVASIKTTAVKDGDDYVINGGKMWTTNGIQADWMCLLANTDKGHPHFNKT 226

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            +    +  G+   R  +K+G   + T E  F N      + +G+  +  G V  M  L 
Sbjct: 227 LICLPLNLPGIQRARNIDKLGMHCSDTAEFYFENVRVPQSYRIGEEGM--GFVYQM--LQ 282

Query: 317 YLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +++  + + + + VSL     E   Y + R   G  ++D   +   +A++  ++    +L
Sbjct: 283 FVEERVFAGASVLVSLERLIKETAEYCKGRTAFGKSILDNQYVHYRLAELQTEVELLRSL 342

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R  +   + K        + ++A + K    ++   V    ++  GG G+  +  ++R
Sbjct: 343 VYRTTDLHIKKKD-------SNLLASMLKLKAGRLVREVTDSCLQFWGGMGFTSDVEVSR 395

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            YR++   SI  G+   M    L+++ K  NL  Q
Sbjct: 396 AYRDNRLLSIGGGADEVM----LSIICKEMNLLPQ 426


>gi|99082284|ref|YP_614438.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99038564|gb|ABF65176.1| Isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 567

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 46/304 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W PKI S E  PT                TE   G
Sbjct: 262 GSLGTRSEIAAELILAGGTDAQKQQWLPKIASAEILPTAV-------------FTEPNTG 308

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K + G Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 309 SDLGSLRTRAVKDAAGDYQITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKT 368

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
              D +P    G+    ++  +G R     EL F    GF +   N+  G  E+ K    
Sbjct: 369 PGTDETPFPTEGMTGGEIE-VLGYRGMKEYELGFD---GFHVKGENLLGG--EEGKGFKQ 422

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++   +SA +  +   + +A+     A+ YA+ R   G  LI+ P +   +A +A+++  
Sbjct: 423 LMETFESARIQTAARAIGVAQSALDIAMQYAQDRKQFGKALINFPRVSSKLAMMAVEVMV 482

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   D       EA  A+++         ++A A     ++  GG+G+  E 
Sbjct: 483 ARQLTYFSAWEKDNGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEY 535

Query: 429 SIAR 432
            I+R
Sbjct: 536 KISR 539


>gi|312865846|ref|ZP_07726068.1| putative acyl-CoA dehydrogenase [Streptococcus downei F0415]
 gi|311098721|gb|EFQ56943.1| putative acyl-CoA dehydrogenase [Streptococcus downei F0415]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 23/277 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K    +Y P      +K ++AI    TE   G+D  A+ +  ++  D  Y L+G K F+S
Sbjct: 102 KELKDKYIPVMVTGEKKGAIAI----TEANSGSDAFAMVTTAKEEGDH-YVLNGSKMFIS 156

Query: 237 S-PMSDAFIMLAQVE----GRVGCFLVPRLLE--DGSPNGLCYQRLKNKIGNRSNATVEL 289
           + P++D FI+ A  +     ++  F+V R  E     PN      L           V++
Sbjct: 157 NGPIADIFIVFAVTQQEPAKKLTAFVVDRESEGVKVGPNIDKMGLLACPTSEVVLENVKV 216

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
              N  G L     + T  +E  +   +       V  M+  + + I  A+ R   G  +
Sbjct: 217 PKENILGRLGSGSTILTQAIEWERCFEFAP----HVGAMQRVMEDCIEQAKTRKQFGKSI 272

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D   +   IA++ + I  +  + +++A   D  K      AYA +   I K +  +   
Sbjct: 273 GDNQSISHKIAEMKIAIELSRLMLYKIAWLKDHQK-----MAYAEV--SIFKTYVSENYI 325

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +A++  G  GY +E  I R  R++ A++I  G+
Sbjct: 326 KTCRDALQIFGAYGYTKEYDIERELRDALASTIYSGT 362


>gi|330503602|ref|YP_004380471.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
 gi|328917888|gb|AEB58719.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
          Length = 387

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 110/251 (43%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +  +++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGNKMWITNGPDAHTYVIYAKTDINAGSRGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + +    G    +  +K+G R + T EL F +        L V  G V  +   +  
Sbjct: 187 TAFIVERDFKGFSRHQKLDKLGMRGSNTCELVFEDCEVPEENILGVEGGGVRVLMSGLDF 246

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  ++S      M   +   + Y   R      + +  +++  +AD+   + A+ +  + 
Sbjct: 247 ERTVLSGGPTGIMSACMDVVLPYVHERQQFKQSIGEFQLVQGKLADMYAGMNASKSYLYN 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  +   ++AA A I+      +  +MA  +  + ++ +GG+GY  E    R  R
Sbjct: 307 VAKACDRGEESRKDAA-AVIL------YTAEMATKMALDTIQLLGGNGYTNEYPAGRLLR 359

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 360 DAKLYEIGAGT 370


>gi|289613972|emb|CBI59206.1| unnamed protein product [Sordaria macrospora]
          Length = 533

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 29/271 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 257 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMN 316

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN----VSTGPV 309
            V  LL +    G+  +R+  + G  S+ T  + F +       L+G  N    V     
Sbjct: 317 GVSLLLIERDFPGVSTRRMDCQ-GVWSSGTTYITFEDVKVPVENLIGKENQGFRVIMTNF 375

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              +I I +     S    RV   E++ YA +R   G  LI+ PV++  +A +A  I A+
Sbjct: 376 NHERIGIIIQCLRFS----RVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEAS 431

Query: 370 TALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMECIG 420
                 L N   + +   E  A  R+          A +T  +C + A  +        G
Sbjct: 432 YNW---LENLIYQCEKMGETEAMLRLGGAIASLKAQATVTFEFCAREASQIFGGLSYSRG 488

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G      + R YR+  A +I  GS   M+
Sbjct: 489 GQG----GKVERLYRDVRAYAIPGGSEEIML 515


>gi|300869408|ref|ZP_07113994.1| Prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|237880749|gb|ACR33074.1| prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|300332588|emb|CBN59192.1| Prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
          Length = 381

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 26/255 (10%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-FLVPR 260
           TE + G+DI ++ +  QK  D  Y L+G+K ++++  ++D FI+ A ++  +G   L   
Sbjct: 128 TEPQAGSDIYSLKTTAQKDGDK-YILNGYKHYVTNGTIADLFIIFATIDPSLGKEGLTTF 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           ++E  +P GL   +  +K+G R+    EL   N       +++ +    E+   L   + 
Sbjct: 187 MIEKDTP-GLILSKPISKMGMRTAEVPELRLENC------EVSAANRLGEEGTGLAIFNH 239

Query: 321 AI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           ++          +V  M   L ++I YAR     G  +    ++   + ++ L +  A A
Sbjct: 240 SMEWERGFILAAAVGTMERLLEQSIRYARSHKQFGQAIGKFQLVANKLVEMKLRLENAKA 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             +++A   +  +    EA+ A +   I++ W          EA+E  G  GY+    + 
Sbjct: 300 YLYKVAWMKENKQMALLEASMANLY--ISEAWV-----QSCLEAIEIHGAYGYLTNTELE 352

Query: 432 RHYRESPANSILLGS 446
           R  R++ A+    G+
Sbjct: 353 RELRDAIASKFYSGT 367


>gi|89055304|ref|YP_510755.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88864853|gb|ABD55730.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 404

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K ++G Y ++G K W  ++P++D F++ A+ +   G++  
Sbjct: 146 FGLTEPDAGSDPAGMKTTAKK-TEGGYVINGAKMWISNAPIADVFVIWAKSDAHGGKIRG 204

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314
           F++ + ++     GL   ++  K+  R++ T E+   N     +G+  +  G VE +K  
Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASVTGEIVMDNV---EVGEDALLPG-VEGLKGP 255

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              L+ A   +S   +  AE     A  Y   R   G  L    + ++ +AD+  +IA  
Sbjct: 256 FGCLNRARFGISWGVMGAAEDCWHRARDYGLDRVQFGRPLAQTQLFQKKLADMQTEIALG 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              + R     ++     E       +  + K   C  A  +   A +  GG+G + E  
Sbjct: 316 LQGALRAGRMMEDGTCGPE-------LISLMKRNNCGKALEIARHARDMHGGNGIMAEYH 368

Query: 430 IARH 433
           + RH
Sbjct: 369 VMRH 372


>gi|114765518|ref|ZP_01444626.1| isobutyryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542111|gb|EAU45143.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 562

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P + S E  PT                TE   G
Sbjct: 257 GSLGTRSEIAAELIIAGGTEEQKQKWLPALASGEKLPTAV-------------FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------GRVGCFLVPRL 261
           +D+ ++ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 304 SDLGSLRTRAVKDENGDYTVTGNKTWITHAARTHVMTLLARTDPSTDNYKGLSMFLAEKT 363

Query: 262 -LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
              D  P    G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 364 PGTDAEPFPTEGMTGGEIE-VLGYRGMKEYELGFD---GFKVKGENLLGGEEGKGFKQLM 419

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+A     + YA  R   G  LID P +   +A +A++I  A 
Sbjct: 420 ETFESARIQTAARAIGVAQAALDVGMRYAEDRKQFGKSLIDFPRVSGKLAMMAVEIMIAR 479

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   DE      EA  A+++         ++A A    A++  GG+G+  E ++
Sbjct: 480 QLTYFSAREKDEGIRCDLEAGMAKLLG-------ARVAWANADNALQIHGGNGFALEYTV 532

Query: 431 AR 432
           +R
Sbjct: 533 SR 534


>gi|67970732|dbj|BAE01708.1| unnamed protein product [Macaca fascicularis]
 gi|90078130|dbj|BAE88745.1| unnamed protein product [Macaca fascicularis]
          Length = 421

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   +  + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKASWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDV---KVPKENVLIGDGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +VS   V LA     EA  YA  R   G +LI+   +   +A++A+ +  A 
Sbjct: 275 GAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 335 MSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|294784037|ref|ZP_06749359.1| acyl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294479849|gb|EFG27628.1| acyl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 378

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 31/273 (11%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG 254
           GLG   LTE   G+D +A  +   K  D  Y L+G K F+++  M+  + + A  +   G
Sbjct: 117 GLGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFITNGEMASFYCITAITDKEKG 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------S 305
              +     +    GL   + ++K+G R+        SNT   +L D  V          
Sbjct: 176 LKGISMFFVEKGTKGLSTGKHEDKMGIRT--------SNTCDVVLEDCRVPASALLGKEG 227

Query: 306 TGPVEDMKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    S  A ++V   +  + EAI Y + R   G  +I    ++  IAD+ 
Sbjct: 228 EGFTIAMKTLDQARSWIACIAVGIAQRGIQEAITYGKERIQFGKPIIKNQALQFKIADME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    A  +        D      +E+A       I K +   +A  V +EA++  GG G
Sbjct: 288 IKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVSSEAIQIFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y  E  + +  R++    I  G+     + + N
Sbjct: 341 YSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|224058541|ref|XP_002189528.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Taeniopygia guttata]
          Length = 423

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 39/264 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+     +      
Sbjct: 162 VTEPGAGSDVAGIKTKAEKKGDE-YVINGQKMWITNGGKANWYFLLARTNPDPKAPASKA 220

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-- 314
               ++E  SP G+   R +  +G R         S+T G +  D+ V   P E++ I  
Sbjct: 221 FTGFIVEADSP-GIQVGRKEMNMGQRC--------SDTRGIVFEDVRV---PKENVLIAE 268

Query: 315 -------LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +   D     V+   V LA     EA  YA  R   G  +++   +   +A++
Sbjct: 269 GAGFKIAMGAFDKTRPPVAAGAVGLAKRALDEATRYALERKTFGKPIVEHQAVSFLLAEM 328

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ +  A     R A   D  +  +         A I K +   +A  V A+A++  GG+
Sbjct: 329 AMKVELARMAYQRAAWEVDAGRRNT-------YYASIAKAFAGDIANQVAADAVQIFGGN 381

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  E  + +  R++    I  G+
Sbjct: 382 GFNTEYPVEKLMRDAKIYQIYEGT 405


>gi|320158808|ref|YP_004191186.1| isovaleryl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
 gi|319934120|gb|ADV88983.1| isovaleryl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
          Length = 389

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +   ++ A+   +     +
Sbjct: 130 LAMSEANSGSDVVSMQLKAKEKGDH-FVLNGSKMWITNGPDAHTLVVYAKTNPKAEAHGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R      P     Q+L +K+G R + T EL F +       +LG++N       
Sbjct: 189 TAFIVERAF----PGFHSAQKL-DKLGMRGSNTSELVFEDCLVPKENVLGEVN------H 237

Query: 311 DMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +++L+  LD   + ++G     MR  L   I Y   R   G  + +  +++  +AD+  
Sbjct: 238 GVRVLMSGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAARSYVYTVAAACDRGEVTRKDAAGVIL-------YSAELATRMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    R  R++    I  G+
Sbjct: 351 VNEFPTGRLLRDAKLYEIGAGT 372


>gi|307205983|gb|EFN84109.1| Glutaryl-CoA dehydrogenase, mitochondrial [Harpegnathos saltator]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 28/245 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D  ++ ++    +D   Y L+G K W   SP++D F++ A+ E G++  F
Sbjct: 130 FGLTEPNHGSDPGSLETRAVYDADRKAYKLNGSKTWITHSPIADVFVIWAKCEDGQIRGF 189

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKI 314
           +  R  ED     L   +++ K   R+++T  +   N        LNV    GP      
Sbjct: 190 VFDR--EDAKER-LSTPKIEGKFSIRASSTGMILMDNVVVPEENMLNVQGLKGP------ 240

Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAA 368
              L++A   ++   +  AEA +  AR     RR     +  +Q V K+ +AD+  DIA 
Sbjct: 241 FTCLNNARYGIAWGALGAAEACLRIARSYTLERRQFQRPLAANQLVQKK-LADMMCDIAL 299

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 R+    DE ++  E       M  + K      A  +   A + +GG+G  +E 
Sbjct: 300 GLQACLRVGRLKDEGRATPE-------MISMIKRNSAGKALEIARVARDMLGGNGVSDEY 352

Query: 429 SIARH 433
            + RH
Sbjct: 353 HVIRH 357


>gi|307727569|ref|YP_003910782.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307588094|gb|ADN61491.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 377

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 34/260 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255
           LTE + G++   + ++   + DG + L+G+K F+++   +D  I+ A  +   G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGNKQFVTNGARADIAIVFAVTDPDRGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP      +P G    R ++K+G R++ T  +   +       LLG+      P E +
Sbjct: 184 FIVP----TDTP-GFNVGRPEHKLGIRASDTCPVSLDDCTVPAANLLGE------PGEGL 232

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDI 366
           +I L  L+   + ++   V +A A   A R + S     G  L D   +   +AD+A  +
Sbjct: 233 RIALSNLEGGRIGIAAQAVGIARAAFDAARAYASERTQFGKALKDHQTIANMLADMATRL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A      +    EA+ A++ A  T    C       + A++  GG GY+E
Sbjct: 293 NAARLLVHHAARLRSAGEPCLSEASQAKLFASETAEQVC-------SNAIQIHGGYGYLE 345

Query: 427 ERSIARHYRESPANSILLGS 446
           + ++ RHYR++    I  G+
Sbjct: 346 DYAVERHYRDARITQIYEGT 365


>gi|284921616|emb|CBG34688.1| Putative acyl-CoA dehydrogenase [Escherichia coli 042]
          Length = 401

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D S  G+    L +KIG    +T       VE+E S+  G
Sbjct: 185 VLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDMVG 243

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 244 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 298

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 299 QEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVIDDA 351

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 352 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|254482834|ref|ZP_05096071.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036915|gb|EEB77585.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 389

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 121/262 (46%), Gaps = 18/262 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P ++ +++ A+ +   G   +
Sbjct: 130 LAMSEPNAGSDVVSMKLKAEKRGDK-YVLNGNKMWITNGPDANTYVIYAKTDPDGGSRGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + +    G    +  +K+G R + T EL F +       +LG+       +  M  L
Sbjct: 189 TAFIVERDFPGFSRHQKLDKLGMRGSNTCELLFEDCEVPAENILGEEGRGVAVL--MSGL 246

Query: 316 IYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  + +    V  M   + + + Y   R   G  + +  +++  +AD+   ++A+ A  
Sbjct: 247 DYERTVLSGGPVGIMMACMDQVVPYIHDRKQFGQSIGEFQLVQGKVADMYTLLSASRAFL 306

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +A + D  +   ++AA A I+      +  + A  +  +A++ +GG+GYI +    R 
Sbjct: 307 YAVARACDRGEESRKDAA-AVIL------FTAEKATQMALDAIQLLGGNGYINDFPTGRL 359

Query: 434 YRESPANSILLGSGNAMVLDVL 455
            R++    I  G+G + V  +L
Sbjct: 360 LRDAKLYEI--GAGTSEVRRML 379


>gi|163849367|ref|YP_001637411.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|163670656|gb|ABY37022.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
          Length = 442

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 39/288 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +P   + W P             PMQ+  +     LTE   G+  AA  +   + 
Sbjct: 158 IDLFGSPEQKQRWLP-------------PMQRFELIGSWALTEPDVGSATAAGLTTTARF 204

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             G++ L G  KW  ++P++D  I+ A+     +V  F+V    E G+P G   +RL+ K
Sbjct: 205 ERGVWVLDGAKKWSGNAPIADINIIWARDVSNNQVQGFIV----ERGTP-GYEVERLEGK 259

Query: 279 IGNRS--NATVELEFSNTFGFLLGDLN--VSTGPVEDM--KILIYLDSAIMSVSGMRVSL 332
           I  R+  NA + L      G  + + N   + G    +  ++ I   +   +++G+ +  
Sbjct: 260 IALRTVQNANIRLN-----GCRVPEANRLPNVGGFRGIARQLAITRAAVAWAMTGVAMGA 314

Query: 333 AE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            E A+ YA++R   G  +    +++ ++  +  ++ A   +  R++         S+E  
Sbjct: 315 YERALAYAQQRIQFGRPIGGFQLVQNSLVQMLANVTAMQTMCLRMSQIAARTGKVSQE-- 372

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                A + K +C +     +A A   +GG+G + E  +AR++ ++ A
Sbjct: 373 ----QASLAKVFCGEKMRETVALARAVLGGNGILLEHEVARYFADAEA 416


>gi|328886014|emb|CCA59253.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 117 PLAKGDAMFSYALSEPDAGSDAAGMKTRAVRDGD-FWILNGVKRWITNAGVSEYYTVMAV 175

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305
            +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 176 TDPDKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVR--IPADRMIGAEG 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK L   D   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 234 TGFATAMKTL---DHTRITIAAQAIGIAQGALDYAKGYVKERKQFGKPIADFQGVQFMLA 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   +           K +   +A  V  +A++ +G
Sbjct: 291 DMAMKLEAARQLTYAAA-----AKSERVDGDLT-FFGAAAKCFASDVAMEVTTDAVQLLG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 345 GYGYTRDYPVERMMRDAKITQIYEGT 370


>gi|328771168|gb|EGF81208.1| hypothetical protein BATDEDRAFT_19249 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 418

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P ++  ++ A+ +   G   +
Sbjct: 159 LAMSEAGSGSDVVSMKLRAEKKGD-RYILNGTKFWITNGPDANVLVVYAKTDINSGPKGI 217

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G       +K+G R + T EL F N       +LG++           ++
Sbjct: 218 TAFLIEKGFKGFTTSPKLDKLGMRGSNTCELVFDNCEVPAENVLGEVGKGV-----YVLM 272

Query: 316 IYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + +SG     M+ +L   + Y   R   G  + +  +++  +AD+   ++A+ 
Sbjct: 273 SGLDLERLVLSGGPLGLMQAALDVTVPYVHDRTQFGQKIGEFQLLQAKLADMYTKLSASR 332

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +  + D     S++ A A +       +  + A     +A++C+GG+G+I +   
Sbjct: 333 SYVYAVGRACDLGHYSSKDCAGAIL-------YSAERATECALDAIQCLGGNGFINDYPT 385

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 386 GRLLRDAKLYEIGAGT 401


>gi|260549812|ref|ZP_05824028.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407062|gb|EEX00539.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 34/288 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG      G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPKENLLG--MEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             G  +      +  +A++  +I    T L   +    DE  S    AA         KY
Sbjct: 283 AFGKPISAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAA--------AKY 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 335 KISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIM 382


>gi|109008502|ref|XP_001101274.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 3 [Macaca mulatta]
          Length = 421

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   +  + +LA+ +          
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKASWYFLLARSDPDPKAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDV---KVPKENVLIGDGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +VS   V LA     EA  YA  R   G +LI+   +   +A++A+ +  A 
Sbjct: 275 GAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  +
Sbjct: 335 MSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|215410567|ref|ZP_03419375.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298524468|ref|ZP_07011877.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298494262|gb|EFI29556.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
          Length = 382

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G RS+ T EL +++       L+G  N     +    +  
Sbjct: 183 LLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATA--- 371
            +  A  + S  +  L     + R R   G  LI +  ++  +A++A  +D+A   A   
Sbjct: 243 RIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHV 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  +LA   D       +  +A+  A     W       V  +A++  GG GY+ E  + 
Sbjct: 303 VERQLAGETDLIA----QVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVE 351

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R +R+     + +G G   +L  L
Sbjct: 352 RQHRD--MRILGIGGGTTEILTAL 373


>gi|288918822|ref|ZP_06413167.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349784|gb|EFC84016.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 38/301 (12%)

Query: 169 RVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           R+H D +   F    +   K      +    +   L LTE   G+D+A +++  ++  D 
Sbjct: 88  RIHADISVPYFVDHGNAEQKQRWLPGLASGELVAALALTEPGAGSDLAGMSTSARRDGD- 146

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F++  + +D F+   + +       +  L+  G   G+      +KIG   
Sbjct: 147 YYVVNGSKTFITGGLNADLFLTAVKTDPTQRHAGLSLLVIPGDLPGVSRGAPLHKIGLHI 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAI--------MSVSGMRV 330
              VE+ F         D+ V   P E++     +   YL S +        ++  G   
Sbjct: 207 QEAVEIFFD--------DVRV---PAENLLGEEGQGFTYLTSHLVQERLSIAINAQGAAA 255

Query: 331 SLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           S+ E  + Y   R + G  L      K  +A  A ++ A  AL  ++  +    ++   +
Sbjct: 256 SIVEQTVEYVNGRKLFGKTLNTFQNTKFVLAGCATEVDAGQALLDQVLLAHVAGEATPAD 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA         K +C +M   VI   ++  GG GYI E  +AR + ++    I  GS   
Sbjct: 316 AAK-------VKLYCTEMQGRVIDACLQLFGGYGYINEYPVARAWADARVGRIYGGSSEV 368

Query: 450 M 450
           M
Sbjct: 369 M 369


>gi|184159570|ref|YP_001847909.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876055|ref|ZP_08443839.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183211164|gb|ACC58562.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509480|gb|ADX04934.1| Acyl coenzyme A dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519501|gb|ADX93882.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735673|gb|EGJ66716.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 34/288 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG      G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPKENLLG--MEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             G  +      +  +A++  +I    T L   +    DE  S    AA         KY
Sbjct: 283 AFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAA--------AKY 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 335 KISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIM 382


>gi|284046203|ref|YP_003396543.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950424|gb|ADB53168.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 417

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 139/323 (43%), Gaps = 52/323 (16%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +M   + +A + +  T  ++  +W P+ F    DP   A            ++E   G+D
Sbjct: 102 IMGSGLAAAGIFSNGTGEQIG-EWIPQCFGTADDPQIAA----------FCVSEPDAGSD 150

Query: 211 IAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLE 263
           ++A+ ++ +  S    + L+G K W  +  +++  +++A V+  +G      F++P    
Sbjct: 151 VSALRTRAKYDSAKDEWVLNGQKAWATNGGIANVHVIVASVDPELGSRGQASFIIP---- 206

Query: 264 DGSPN--GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG---DLNVSTGPVED---- 311
              PN  GL       K G R++ T ++   +       LLG    L+     V +    
Sbjct: 207 ---PNTPGLVMGTKVRKHGLRASHTADVFLDDCRIPGSCLLGGKEKLDARLARVREGVKS 263

Query: 312 --MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +   +++  +V    + +A A     + YA+ R   G  +I+   +   +ADI L
Sbjct: 264 RGQAAMATFEASRPTVGAQALGIARAAYEYALDYAKERRQFGRAIIENQAIAFTLADIKL 323

Query: 365 DIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +I AA  L +R +    ++   R+ E + +++ A     W  +        A++ +GG+G
Sbjct: 324 EIDAARLLVWRASWMGRNQVPFRNAEGSMSKLKAGEVAVWATE-------RAIQILGGNG 376

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + R +R++   +I  G+
Sbjct: 377 YTREFPVERMHRDAKIYTIFEGT 399


>gi|157376360|ref|YP_001474960.1| crotonobetainyl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157318734|gb|ABV37832.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 378

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 116/280 (41%), Gaps = 27/280 (9%)

Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           N+  +QK     G G       +TE   G+D+ ++ +  ++ +  +Y L+G K F++S  
Sbjct: 101 NQDQIQKIMELRGTGKQMWNSAITEPSAGSDVGSLLTTYKRKNGKVY-LTGSKCFITSAA 159

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------S 292
              +I++   +      +      D S  G+   +L  K+G + ++  EL+F       S
Sbjct: 160 GTPYIVVMAKDADSEKPIFTEWFVDMSKPGIKLGKLP-KLGLKMDSCCELQFDELELEES 218

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           + FG             +  + L+    A+ +      +  +A  YA +R   G  +   
Sbjct: 219 DMFGEEGNGFLRVKEEFDSERFLV----ALTNYGAAYCAFEDAAKYANQRVQFGEAIGRY 274

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++   A +A+ + +   + +  A   D+    S ++A       + KY+C      VI
Sbjct: 275 QLIQDKFAHMAIKLNSMKNMVYEAAWKCDQGTMTSGDSA-------MCKYFCANAGFEVI 327

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             AM+ +GG     E  I+R +R+   + +  GS    +L
Sbjct: 328 DSAMQVLGGYAIAGEHRISRMWRDIRVDRVSGGSDEMQIL 367


>gi|114647351|ref|XP_001162899.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
           isoform 1 [Pan troglodytes]
          Length = 366

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 62/253 (24%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253
             L+E   G+D  A ++  +   D  + L+G K W  ++  + A ++ A  +       +
Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP         GL   + ++K+G R ++T  L F                  ED +
Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIF------------------EDCR 247

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           I      +I+   GM   +A                    + K  +AD+AL + +A  L+
Sbjct: 248 IP---KDSILGEPGMGFKIA--------------------MFK--LADMALALESARLLT 282

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A   D  K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RH
Sbjct: 283 WRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERH 335

Query: 434 YRESPANSILLGS 446
           YR++    I  G+
Sbjct: 336 YRDARITEIYEGT 348


>gi|326384072|ref|ZP_08205755.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197232|gb|EGD54423.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 386

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 26/265 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF 256
           + + +TE   G+D+ ++ +   +  D  Y ++G K F+S +   D  +++A+ + + G  
Sbjct: 128 LAIAMTEPGTGSDLQSVRTTAVRDGDH-YVINGSKTFISNASHCDLLVIVAKTDPKQGAK 186

Query: 257 LVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            +   + E     G    R+  KIG     T EL F++       LLG +    G  + M
Sbjct: 187 GISLFVAETADLPGFERGRVLEKIGQHGQDTRELSFTDMRVPADNLLGGVE-GQGFYQLM 245

Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    L   + +V+    +++E I YA++R   G  ++     K  +A+   D+ A  
Sbjct: 246 SQLQRERLIIGVGAVAAAEAAVSETIAYAKQREAFGKPILSFQNTKFVLAECKADVLAGK 305

Query: 371 AL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            L       ++A   D A             A + K W  +    ++   ++  GG GY+
Sbjct: 306 TLVDHCIGEQIAGRLDPA------------TASMAKLWGTEKQKKIVDRCLQLFGGYGYM 353

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IAR Y ++   +I  G+   M
Sbjct: 354 MEYPIARMYTDARVQTIYGGTSEIM 378


>gi|297278971|ref|XP_002801631.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
          Length = 385

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   +  + +LA+ +          
Sbjct: 124 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKASWYFLLARSDPDPKAPANKA 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 183 FTGFIVEADTP-GIQIGRKELNMGQRC--------SDTRGIVFEDVKVPKENVLIGDGAG 233

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D    +VS   V LA     EA  YA  R   G +LI+   +   +A++A+ 
Sbjct: 234 FKIAMGAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMK 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 294 VELARMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFN 346

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 347 TEYPVEKLMRDAKIYQIYEGT 367


>gi|282866046|ref|ZP_06275094.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559085|gb|EFB64639.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 380

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 41/309 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P +TS      + T    + W P   S E           T  AI +  TE   G+D
Sbjct: 94  IIGPYLTS------LATDEQKRRWLPGFCSGE-----------TITAIAM--TEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + AI +  +   D  + L+G K F+S+  ++D  I++A+     G   +  ++ +    G
Sbjct: 135 LQAIRTTAEDKGDH-WLLNGSKTFISNGILADLVIVVARTSPEGGAKGLSLIVVERGAEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +KIG +S  T EL F +       LLG+ + +      + ++  L    M ++
Sbjct: 194 FERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGERDGAF-----LHLMTNLAQERMGIA 248

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              ++ AE +      Y + R   G  L     ++  IA++A + A             D
Sbjct: 249 VAGIAAAEHLLEITTRYVKEREAFGRPLAKLQHIRFEIAEMATECAVTRTF-------LD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   +     + A + K+W  ++   V    ++  GG GY+ E  +AR + +    +
Sbjct: 302 RCIADHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMTEYRVARAFTDGRIQT 361

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 362 IYGGTTEIM 370


>gi|257791586|ref|YP_003182192.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317488001|ref|ZP_07946583.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475483|gb|ACV55803.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912903|gb|EFV34430.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 402

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 31/266 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---- 246
            Q  ++     LTE+ GGT  A + +   K  +G Y L+G KW +S      +  +    
Sbjct: 114 FQDKTIFTNFALTEQTGGTG-ADLHTTALKDENGNYVLNGEKWLISHTDCSQYAYVIAVT 172

Query: 247 ---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
               Q + R+  F VP      +P G     + + +G R       + ++      +LLG
Sbjct: 173 DPEKQGDERLSAFFVPM----DTP-GFELVPMPHMMGCRGAGHAGFKMTDVVLDPKYLLG 227

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    + V+   +   ++ I   +  M+   + +S+A     AR R   G  +I +  +K
Sbjct: 228 EEGQGMEVAMHSLAISRVHIADSNLGMAQRMLEMSIAR----ARDRVTFGKPIIQRQAIK 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A +I A   +    A+ +D    +     +    A + K +       V  E +
Sbjct: 284 MKLANMATNIHALRCMVMDFADDYD----KDPHNEFVDEKAAMCKLFSIDTVKMVSDEML 339

Query: 417 ECIGGSGYIEERSIA---RHYRESPA 439
           E  GG GY E+       R YR+  A
Sbjct: 340 EIFGGDGYFEDSPYGPTERLYRDCRA 365


>gi|154251277|ref|YP_001412101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155227|gb|ABS62444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 409

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 21/282 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   +G  GLTE   G+D  ++ ++  K+ DG Y L+G K W  ++P+SD  ++ A
Sbjct: 142 PKLATGEWVGCFGLTEPDHGSDPGSMRTRAAKV-DGGYVLNGAKMWITNAPISDLAVVWA 200

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + E  V   F+V R  +     G    +++ K   R++ T E+   + F     LL ++ 
Sbjct: 201 KTEDDVIRGFVVERGFK-----GFETPKIEGKFSLRASITGEISLQDVFVPDENLLPNVR 255

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP   +    Y   A  ++         A  Y   R   G  L    ++++ +AD+ 
Sbjct: 256 GLAGPFGCLNRARY-GIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQ 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        +L   FD        AA A I   + K   C  A  +   A +  GG+G
Sbjct: 315 TEITLGLQGCLQLGRMFDAGT-----AAPASI--SLMKRNNCGKALDIARVARDMHGGNG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 368 VSDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGREQTGIQAF 408


>gi|156741867|ref|YP_001431996.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233195|gb|ABU57978.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 418

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 34/273 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-----SDAFIML-AQVE-- 250
           + +TE   G+D AAI +  +   DG  + L+G K F++  +     S  F+++ A V+  
Sbjct: 137 MAMTEPHCGSDTAAIRTTARLSEDGTEWILNGEKIFVTGGLMAAKESRGFVVVWATVDPS 196

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
            GR G  + P ++E G+P G+   +L++K G R++ T  + F++    +  +LG   V  
Sbjct: 197 AGRAG--MKPFVVEAGTP-GMTVTKLEHKHGIRASDTAAIVFNDCRIPYDNILGSPEVVK 253

Query: 307 GPVEDMKI---LIYLDSA--IMSVSGM---RVSLAEAIHYARRRHVS---GGILIDQPVM 355
           G  E       +   D+   +++ S +   R SL     Y + R V    G     Q  +
Sbjct: 254 GDTEHKGFKGAMKTFDATRPLVAASALGIARASLEFTAAYLKERGVKVRYGVAPHLQTAV 313

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R +  + +   A   L  +     D  +  + EA+ A++ A        ++A  V  +A
Sbjct: 314 ERDLIHMEMQHRAGWLLVLKAVTKMDAGEENALEASMAKVKA-------GQVATYVSQKA 366

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +E +G  GY  +  + +  R++  N I  G+G 
Sbjct: 367 VELLGPEGYSCKLLVEKWMRDARINDIYEGTGQ 399


>gi|56421315|ref|YP_148633.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56381157|dbj|BAD77065.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 404

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 12/100 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVG-----C 255
           LTE   G+D + I +  +K+ DG Y L+G K F+++    +++++ A V+ ++G      
Sbjct: 138 LTEPEAGSDASGIRTTAKKV-DGGYVLNGQKIFITNGARASWVVVFATVDPKLGRAGHRA 196

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           F+V    E G+P G    R  +K+G R+N T EL F + F
Sbjct: 197 FVV----EKGTP-GFVATRTVHKMGLRANETAELLFEDCF 231


>gi|332235168|ref|XP_003266779.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 394

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 32/257 (12%)

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLL 262
           +D+ ++  + +K  +  Y L+G+K W  + P +D  I+     LA V    G  +   ++
Sbjct: 142 SDVVSMKLKAEKKGNH-YILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIV 198

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLD 319
           E G P G    +  +K+G R + T EL F +       +LG  N          ++  LD
Sbjct: 199 EKGMP-GFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGV-----YVLMTGLD 252

Query: 320 SAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++G     M+  L   I Y   R   G  +    +M+  +AD+   + A     +
Sbjct: 253 LERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVY 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A + DE    +++ A   +       +  + A  V  + ++C GG+GYI +  + R  
Sbjct: 313 NVAKACDEGHCTAKDCAGVIL-------YSAECATQVALDGIQCFGGNGYINDFPMGRFL 365

Query: 435 RESPANSILLGSGNAMV 451
           R++    I  G+G + V
Sbjct: 366 RDAKLYEI--GAGTSEV 380


>gi|322784912|gb|EFZ11683.1| hypothetical protein SINV_00192 [Solenopsis invicta]
          Length = 376

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 120/264 (45%), Gaps = 36/264 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ + +      
Sbjct: 115 LAMSEPGSGSDVVSMKLRAEKKGDH-YVLNGNKFWITNGPDADVIVVYARTDPKTDKPQH 173

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F+V R  E     G    +  +K+G R + T EL F +       +LG++N     
Sbjct: 174 GITAFIVERGTE-----GFSTAQKLDKLGMRGSNTGELIFEDCKVPVANILGEVN----- 223

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            + + +L   LD   + ++G  + + +A       YA  R   G  L    +++  IAD+
Sbjct: 224 -KGIYVLFSGLDLERLVLAGGPMGILQACCDVAFEYAHTRQQFGQYLAQFQLLQGKIADM 282

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              ++++ +  + +A + D      ++ A   +       +C + A    ++A++ +GG+
Sbjct: 283 YTALSSSRSYLYSVARACDSGHLNRKDCAAVLL-------YCAESAMKASSDAIQILGGN 335

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI +    R  R++    I  G+
Sbjct: 336 GYINDYVTGRLLRDAKLYEIGAGT 359


>gi|85374832|ref|YP_458894.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84787915|gb|ABC64097.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 382

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 49/283 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D A + +    + DG  Y L+G K F+S   ++D ++ + +        +  
Sbjct: 126 LTEPGSGSDAAGLKTSA--VLDGDHYVLNGTKQFISGGGVNDVYVTMVRTSDHKTKGITC 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------ 313
            +++  +P G+ +   + K+G  ++ T ++        +L D  V   PVE+        
Sbjct: 184 LVIDKDTP-GVSFGAPEKKLGWNASPTAQV--------ILEDARV---PVENRVGDEGEG 231

Query: 314 ---ILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360
               ++ LD   +     S+ G +  L EA+ Y + R        DQPV      +  +A
Sbjct: 232 FRFAMMGLDGGRLNIGACSLGGAQRCLDEAVAYTKERQ-----QFDQPVADFQNTQFMLA 286

Query: 361 DIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D+A D+ AA AL +  A    E A  +S  +A A+ +A             ++ +A++  
Sbjct: 287 DMATDLEAARALLYLAAAKVTENAPDKSRFSAMAKRLA-------TDNGSKIVNDALQLF 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKG 461
           GG GY+++  I R +R+   +SIL G+   M + V  +LL +G
Sbjct: 340 GGYGYLKDYPIERFWRDLRVHSILEGTNQVMRMIVGRDLLRQG 382


>gi|68536494|ref|YP_251199.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68264093|emb|CAI37581.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 385

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 116/251 (46%), Gaps = 11/251 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE+  G+D  A+ ++  +  D  + ++G K F+++   S  + ++A  +   G   +  
Sbjct: 126 LTEREAGSDAGAMKTRAVRDGDE-WVINGSKCFITNGGKSTWYTVMAVTDPEAGARGISA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            + +    G      ++K+G + + T EL F +       ++G+    TG    ++ L +
Sbjct: 185 FMVNKDDPGFSVSGYEHKLGIKGSPTAELLFEDCRVPASRMIGEEG--TGFKTALQTLDH 242

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I   ++   + +  +A+ Y + R   G  + D    +  +AD+ + I AA  + + 
Sbjct: 243 TRPTIGAQALGIAQGAFDQAVAYVKERKQFGKAIADFQNTQFMLADMKMKIDAARLMIYT 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ +  +  +E+ A   +MA  +K +   +A  V  +A++ +GG G+  +  + R  R
Sbjct: 303 AASNAE--RGVAEDGAKLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPLERMMR 360

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 361 DAKITQIYEGT 371


>gi|196008563|ref|XP_002114147.1| hypothetical protein TRIADDRAFT_58314 [Trichoplax adhaerens]
 gi|190583166|gb|EDV23237.1| hypothetical protein TRIADDRAFT_58314 [Trichoplax adhaerens]
          Length = 418

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 128/286 (44%), Gaps = 43/286 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G K
Sbjct: 144 YLPKLISGEY--------------IGALAMSEPNAGSDVMSLRLRAEKQGNH-YVLNGTK 188

Query: 233 -WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  + P++D  I+ A+      +  +  F+V    E  +P     Q+L +K+G R + T
Sbjct: 189 FWITNGPVADIIIVYAKTDPAAHQHGISAFIV----ETKTPGFSIAQKL-DKLGLRGSET 243

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            EL F +     + + N+     + +++L+  LD    +++G  + + +++      +V 
Sbjct: 244 GELVFEDC---KIPEENILGRVNKGVQVLMSGLDLERGTLAGGAIGIMQSVVDVVYPYVH 300

Query: 346 GGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                DQ +     ++  +AD+   +    +  + +  +FD    RS + A A I+    
Sbjct: 301 TREQFDQKIGQFQMIQSKLADMYNTLNLCRSYLYNVVRAFDRGVIRSADCAAAGIL---- 356

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                + A  +  + ++C+GG+GYI +    R  R++    I  G+
Sbjct: 357 ---VGENATQMALDGIQCLGGNGYINDYPTGRMLRDAKIFEIAGGT 399


>gi|91978158|ref|YP_570817.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684614|gb|ABE40916.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 391

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 65/291 (22%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W PKI S E        +Q        G+TE   GTD  ++ +  +K  +G Y ++G K 
Sbjct: 111 WLPKIASGELR------LQ------AFGVTEPTSGTDTTSLKTFAKKDDNGDYVVNGQKI 158

Query: 233 WFLSSPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           W   +  SD  ++LA+   +         +  FLV   + +   +GL  + ++  +   +
Sbjct: 159 WTSRAEYSDLMVLLARTTAKDQTAKKTEGLSVFLVD--MREARGHGLEIRPIRTMM---N 213

Query: 284 NATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +AT E+ F++               F ++L  +N         +ILI    A   V   +
Sbjct: 214 HATTEVFFTDLKVPKENLIGEEGKGFRYILSGMNAE-------RILI----AAECVGDAK 262

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             +A+A +YA+ R V G  +     ++  IA     + AA  +       ++       E
Sbjct: 263 WFIAKATNYAKDRVVFGRPIGQNQGIQFPIAKAYAQMRAAELMVKEATRKYEAGLDCGAE 322

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           A  A+++A          A A    A  CI   GG G+ EE  + R +RE+
Sbjct: 323 ANMAKMLA----------ADASFEAANACIQTHGGFGFAEEYDVERKFRET 363


>gi|94311137|ref|YP_584347.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354989|gb|ABF09078.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 388

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 35/253 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             L+E   G+D+AA+    +   DG  Y L+G K W  +  ++D + + A+         
Sbjct: 129 FALSEPEAGSDVAAMQCSAKLSDDGTHYVLNGAKTWISNGGIADFYCVFARTGEAARARG 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILI 316
           +   + D +  GL      + I     AT+  +      G  LG+      P +  K+  
Sbjct: 189 ITAFVVDANTPGLSIAERIDVIAPHPLATLRFDDCRVPVGNRLGE------PGQGFKV-- 240

Query: 317 YLDSAIMSVSGMRVSLAEA------------IHYARRRHVSGGILIDQPVMKRAIADIAL 364
               A+M++   R S+A A            +  A  R + GG+L D  + + AI D+A 
Sbjct: 241 ----AMMTLDIFRASVAAAALGFGRAALDDALARATSRPMFGGVLADLQLTQAAIGDMAT 296

Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            I AA  L++R A   D  + R + EAA A+++A        + A  VI  A++  GG G
Sbjct: 297 AIDAAALLTYRAAWLRDVRQQRTTREAAMAKMVAT-------ENAQQVIDRAVQMFGGLG 349

Query: 424 YIEERSIARHYRE 436
                 +   YRE
Sbjct: 350 VKVGTRVESLYRE 362


>gi|239832204|ref|ZP_04680533.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824471|gb|EEQ96039.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 385

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  +D ++ + +  G  G   +  
Sbjct: 130 LTEPGSGSDAAALRTRATRDGDH-YILNGSKQFISGAGATDIYVTMVRT-GEDGPKGIST 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMK 313
           ++      GL +   + K+G  +  T  + F N       LLG+      ++   ++  +
Sbjct: 188 IVVPKDAPGLSFGANEFKMGWNAQPTRTVIFDNCRVPVENLLGEEGTGFRIAMAGLDGGR 247

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+ G + +L +++ +  +R   G  +     ++  +AD+  +++A+  L 
Sbjct: 248 LNI----AACSLGGAQSALDKSLEHCSQRKAFGQTIDRFQALQFRLADMETELSASRLLL 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A+  D    ++ +A     MA   K +       V  EA++  GG GY+ E  I + 
Sbjct: 304 YAAASKLDR---KTHDAGKWSAMA---KRFVTDTGFDVANEALQLFGGYGYLHEYGIEKL 357

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 358 VRDLRVHQILEGTNEIM 374


>gi|159482534|ref|XP_001699324.1| hypothetical protein CHLREDRAFT_40101 [Chlamydomonas reinhardtii]
 gi|158272960|gb|EDO98754.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 324

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ- 248
           M K  +     LTE   G+D +A+TS   K+  G + L+G+K W  +   +D  IM A+ 
Sbjct: 132 MAKFELVGCWALTEPSNGSDASALTSTATKVPGG-WMLNGYKRWIGNGTWADVCIMWARN 190

Query: 249 -VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             +G+V  F+V      G+P GL   +++NKI  R     ++EFS  F
Sbjct: 191 NQDGQVNAFIV----RKGNP-GLRTSKIQNKIALRCVQNADMEFSQCF 233


>gi|169794622|ref|YP_001712415.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213158807|ref|YP_002320805.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482211|ref|YP_002324393.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239503206|ref|ZP_04662516.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301348160|ref|ZP_07228901.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513378|ref|ZP_07238615.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595212|ref|ZP_07240220.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB059]
 gi|332853167|ref|ZP_08434604.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868587|ref|ZP_08438243.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147549|emb|CAM85410.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213057967|gb|ACJ42869.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986364|gb|ACJ56663.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332728836|gb|EGJ60195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733264|gb|EGJ64458.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 128/322 (39%), Gaps = 28/322 (8%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           RLY M  +E       S T  S+ + +    ++       F  E       P   T   +
Sbjct: 79  RLYSMILIEEQAYAMDSSTGFSLHSDIVANYINN------FGNEEQKQKWLPKMATGETV 132

Query: 199 -GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV-EGRVG 254
             + +TE   G+D+ A+ +    + DG  Y ++G K F+++  + D  I++ +      G
Sbjct: 133 TAIAMTEPGTGSDLQAVRTTA--VLDGDEYVINGSKIFITNGYLCDMAIVVCKTGNSDKG 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +  ++ +    G    +  NKIG +   T EL F N       LLG      G +  
Sbjct: 191 SANLSLIIVEADRAGFTKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG--MEGMGFIML 248

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA-A 368
           MK L +  +  AI+  +G   + A  + Y + R   G  +      +  +A++  +I   
Sbjct: 249 MKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGAFQNTRFKLAELRTEIDFC 308

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            T L   +    DE  S    AA         KY    M   V+ E ++  GG GY+ E 
Sbjct: 309 RTYLDRCMELQLDEKLSVEAAAA--------AKYKISDMFSKVVDECLQLHGGYGYMLEY 360

Query: 429 SIARHYRESPANSILLGSGNAM 450
            IAR Y +  AN I  G+   M
Sbjct: 361 PIARAYIDHRANRIYAGTNEIM 382


>gi|163751276|ref|ZP_02158503.1| crotonobetainyl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161328873|gb|EDP99947.1| crotonobetainyl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 378

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 109/258 (42%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +  ++ +  +Y ++G K F++S     +I++   +      +    
Sbjct: 123 ITEPSAGSDVGSLLTTYKRKNGKVY-ITGSKCFITSAAGTPYIVVMAKDADSEKPIFTEW 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
             D S  G+   +L  K+G + ++  EL+F       S+ FG             +  + 
Sbjct: 182 FVDMSKPGIKLNKLP-KLGLKMDSCCELQFDELELEESDMFGKEGNGFLRVKQEFDSERF 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +
Sbjct: 241 LV----ALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVY 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D     S ++A       + K++C      VI  AM+ +GG   + E  I+R +
Sbjct: 297 EAAWKCDNGMMTSGDSA-------MCKFYCANAGFEVIDSAMQVLGGYAIVGEHRISRMW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDIRVDRVSGGSDEMQIL 367


>gi|67538200|ref|XP_662874.1| hypothetical protein AN5270.2 [Aspergillus nidulans FGSC A4]
 gi|40743240|gb|EAA62430.1| hypothetical protein AN5270.2 [Aspergillus nidulans FGSC A4]
 gi|259485298|tpe|CBF82203.1| TPA: acyl-CoA dehydrogenase (AFU_orthologue; AFUA_2G16630)
           [Aspergillus nidulans FGSC A4]
          Length = 425

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 7/260 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+A IT+  ++  D        KW  +   +D +   A   G  G   V 
Sbjct: 154 LGVTEPDAGSDVAGITTTAERRGDKYIVNGAKKWITNGIFAD-YCTAAVRTGGEGIAGVS 212

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+   + +G+  +++ N  G  ++ +  +EF +       LLG+ N     + +     
Sbjct: 213 ALVIPLNASGVTRRKIDNS-GVLASGSTYIEFDDVEVPVSNLLGEENKGFPIIMNNFNHE 271

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A  S+   RV   +A  +A  R   G  LI+  V++   A +   + +A A   +L
Sbjct: 272 RLWLACTSLRMARVCAEDAYRHAITRETFGKKLIENQVIRAKFAAMGRSLDSAYAWMEQL 331

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               + AK+   +AA   + A + K    +    V  EA + +GG GY +    AR  + 
Sbjct: 332 VYMAETAKANHTDAAMGGLFANL-KVLAGRTLEMVNREAQQVLGGLGYSKNGRGARIEQI 390

Query: 437 S-PANSILLGSGNAMVLDVL 455
           S     +++G G+  +L  L
Sbjct: 391 SRDVRVMVVGGGSEEILSEL 410


>gi|323968463|gb|EGB63869.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
          Length = 384

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 109 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 167

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D S  G+    L +KIG    +T       VE+E S+  G
Sbjct: 168 VLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLNNVEVEESDMVG 226

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 227 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 282 QEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVIDDA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 335 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|163789384|ref|ZP_02183823.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
 gi|159875238|gb|EDP69303.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
          Length = 401

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 42/298 (14%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +P     W PK             +Q   +     LTE   G+D AA  +   +   
Sbjct: 120 LGGSPEQQMRWLPK-------------LQNFELQTCFALTEPEHGSDTAAGLATTARREG 166

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + ++G K W   +  +D   + A+   + +V CF+V +        GL    + +KI 
Sbjct: 167 DKWIINGEKRWIGGASSADLIPVYARDLEDNKVKCFIVEK-----GQKGLSVDDIDDKIA 221

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIH 337
            R      +   N        L    G  +D+  ++Y   A ++ +G   M  SLA A+ 
Sbjct: 222 LRIVQNGNIHLDNVEVLESNRLQNING-FKDVAKILYATRAGVAYAGAGMMAGSLAAALE 280

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +A +  +   A ALS R+A    E + R E   Y+ I A
Sbjct: 281 YTTTRVQFGKPIASFQLVQEKLARMQGNAVTALALSARIA----ELQERGE---YSEINA 333

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA----------NSILLG 445
            + K           A   E  GG+G   ER++AR + ++ A          NS+++G
Sbjct: 334 SLAKMNNSLRLRETAALGREVCGGNGITLERNVARFFCDAEAIYSYEGTHEMNSLIMG 391


>gi|119382954|ref|YP_914010.1| butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
 gi|119372721|gb|ABL68314.1| Butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 386

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 24/247 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLV 258
           LTE   G+D  ++    +   D  Y L+G K F++ +P +  F + A+ +   +    + 
Sbjct: 124 LTEPDAGSDAGSLRCSARLDGDH-YVLNGTKRFITNAPHAGLFTVFARTDPDSKSAAGVT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKI 314
             L+E G+P GL       K+G + + T ++   +        + G   +  G    MK+
Sbjct: 183 AFLVEAGTP-GLHLGPRDRKMGQKGSHTCDVILEDCRVPASAIIGGPDRLGQGFKTAMKV 241

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L   D   + +S + V  AE     ++ YA  R   G  + ++ +++  +AD   +  AA
Sbjct: 242 L---DRGRLHISAVCVGAAERLIRDSLAYAMERRQFGEPIAEKQLVQAMLADSRAEAYAA 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +    A   D   S S EAA         K +  +M   V   A++  GG+GY+ E +
Sbjct: 299 RCMIEETARRKDAGLSVSTEAA-------CCKMYASEMVGRVADRAVQIHGGAGYMAEYA 351

Query: 430 IARHYRE 436
           + R YR+
Sbjct: 352 VERFYRD 358


>gi|327252812|gb|EGE64466.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           STEC_7v]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D S  G+    L +KIG    +T       VE+E S+  G
Sbjct: 167 VLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLNNVEVEESDMVG 225

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 226 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 281 QEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVIDDA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 334 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|163760734|ref|ZP_02167814.1| Ivd, isovaleryl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162282056|gb|EDQ32347.1| Ivd, isovaleryl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 382

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 26/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P ++  ++ A+ +       +
Sbjct: 123 LAMSEPGSGSDVVSMKLRAEKRND-RYVLNGNKMWITNGPDANTLVVYAKTDPEAKSRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +    F  +LG+        +  +IL
Sbjct: 182 TAFLIEKGMAGFSTAQKLDKLGMRGSNTCELVFEDCEVPFDNVLGEEG------QGARIL 235

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M  ++   + Y   R   G  + +  +M+  +AD+   + A 
Sbjct: 236 MSGLDYERVVLSGGPLGIMAAAMDVVVPYCHERKQFGEPIGNFQLMQGKLADMYTTMNAC 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++AA   +       +  + A  V  EA++ +GG+GYI +  
Sbjct: 296 RAYVYAVAAACDRGETTRKDAAGCIL-------YSAEKATQVALEAIQALGGNGYINDYP 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
             R  R++    I  G+G + V  +L
Sbjct: 349 TGRLLRDAKLYEI--GAGTSEVRRML 372


>gi|293410009|ref|ZP_06653585.1| acyl-CoA dehydrogenase [Escherichia coli B354]
 gi|301026926|ref|ZP_07190322.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           69-1]
 gi|331683202|ref|ZP_08383803.1| putative acyl-CoA dehydrogenase [Escherichia coli H299]
 gi|291470477|gb|EFF12961.1| acyl-CoA dehydrogenase [Escherichia coli B354]
 gi|300395273|gb|EFJ78811.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           69-1]
 gi|323978168|gb|EGB73254.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
 gi|331079417|gb|EGI50614.1| putative acyl-CoA dehydrogenase [Escherichia coli H299]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D S  G+    L +KIG    +T       VE+E S+  G
Sbjct: 167 VLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDMVG 225

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 226 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI +A
Sbjct: 281 QEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVIDDA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 334 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|110833432|ref|YP_692291.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646543|emb|CAL16019.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 382

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 41/280 (14%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG + +TE   G+D+  + +   K  D  Y L+G K F+++   +D  I++A
Sbjct: 114 PKMVTGEMIGAIAMTEPGAGSDLQGVKTTAIKDGDH-YVLNGSKTFITNGQNADIVIVVA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +   G   +   + +    G    +   K+G ++  T EL F +       LLG+  +
Sbjct: 173 KTDPTKGAKGISLFVVETDSEGFEKGKNLKKVGMKAQDTSELFFQDVRVPAENLLGEEGM 232

Query: 305 STGPVEDMKILIYLDSAI------MSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVM 355
                      IYL   +      +SV G+ ++   LA  I Y + R   G  +      
Sbjct: 233 G---------FIYLMKELPQERLGISVGGLAMAESALAHTIEYVKERKAFGKPIAGFQNT 283

Query: 356 KRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +  IA++   +  A A     L   L    D               A   KY+   +   
Sbjct: 284 QFKIAEMHTKLEVARAYVDRCLELHLKKELDIP------------TAAAGKYYITDLQCE 331

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           VI E ++  GG GY+ E  IAR + +S    I  G+   M
Sbjct: 332 VIDECLQLHGGYGYMWEYPIARMFADSRVQRIYGGTNEIM 371


>gi|108798573|ref|YP_638770.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867672|ref|YP_937624.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434171|ref|YP_001069862.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108768992|gb|ABG07714.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693761|gb|ABL90834.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126233971|gb|ABN97371.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 404

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++  +   D  Y ++G K F+++      I+    L +  GR  +
Sbjct: 134 MAITEPGFGSDSAAVSTTARLEGDE-YVINGEKIFVTAGSRATHIVVWATLDKSLGRAAI 192

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD--LNVSTGP 308
             F+VPR        G+  +RL++K+G +++ T  + F N       LLGD  ++V  G 
Sbjct: 193 KSFIVPR-----DHPGVTVERLEDKLGIKASDTAVIRFDNARIPKDNLLGDPEIHVEKGF 247

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIAD---- 361
              M+     D+    V+GM V +   A+   R+     G+ I  D+P   ++ A     
Sbjct: 248 AGVMET---FDNTRPVVAGMAVGIGRAALEELRKILTDAGVEISYDKPAHAQSAAAAEFL 304

Query: 362 -IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  A   L+ R A   D A   S+EA+ A+  A        ++   +  + +E  G
Sbjct: 305 RLEADWEAGYLLTVRSAWQADNAIPNSKEASMAKAKA-------ARVGSDITLKVVEMAG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY EE  + +  R+S    I  G+
Sbjct: 358 TVGYSEESLLEKWARDSKILDIFEGT 383


>gi|81241187|gb|ABB61897.1| putative oxidoreductase [Shigella dysenteriae Sd197]
          Length = 401

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 126 TAESTLETGDPAYALALTEPDAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 184

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 185 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 241

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 242 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 296

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D  +S        R  A + K +C + A  VI 
Sbjct: 297 MIQEKLALMAIKIDNMRNMVLKVAWQADLHQS-------LRTSAALAKLYCARTAMEVID 349

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 350 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 387


>gi|294953057|ref|XP_002787573.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Perkinsus marinus ATCC 50983]
 gi|239902597|gb|EER19369.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Perkinsus marinus ATCC 50983]
          Length = 621

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 18/189 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+++   K+  G + ++G K W  +S  +  F++ A V+  +G      
Sbjct: 346 LSEAGAGSDAFALSTTATKVPGG-WAINGDKMWISNSKEAGLFLLFATVDRSLGHKGITA 404

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           FL+P+   D    G    + + K+G ++++T  L F N F     LLG   V  G    M
Sbjct: 405 FLMPKYEGDLVREGFTIGKPEKKLGIKASSTCPLNFDNVFLPDSALLG--RVGEGYKVAM 462

Query: 313 KIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +L    I + + ++ ++  + ++  ++ Y   R   G  L+D   M+  +A++  ++ A
Sbjct: 463 SLLNEGRIGIAAQMLGIA--KAAIKHSMRYMSERKQFGKTLLDFQGMRFQLAELQAEVYA 520

Query: 369 ATALSFRLA 377
           A  L +  A
Sbjct: 521 AQLLVYNAA 529


>gi|197246590|gb|AAI68801.1| Unknown (protein for IMAGE:7855999) [Xenopus (Silurana) tropicalis]
          Length = 633

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 38/325 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA----------QV 249
           LTE   G+D A+I +  +K   G  Y LSG K W  +  ++D F + A          + 
Sbjct: 195 LTEPTSGSDAASIRTAARKSPCGKYYTLSGGKIWISNGGIADVFTVFAKTPVQDPATGET 254

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +V  F+V R        G+ +   + K+G R++ T  + F       +   NV  G  
Sbjct: 255 REKVTAFIVER------GEGVTHGPPEKKMGIRASNTAAVFFDEV---RVPAENVLGGEG 305

Query: 310 EDMKILIYLDS-----AIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              K+ + + +        ++SG M+  +  A+ +A  R   G  L    +++  +A +A
Sbjct: 306 NGFKVAMNILNNGRFGMAAALSGTMKGMIQRAVEHATSRTQFGSKLHQFGIIQEKLARMA 365

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +      ++++ ++ + D      +      I A I+K +  + A +V  E ++ +GG+G
Sbjct: 366 VLQYVTESMAYMISANMDSGHKDFQ------IEAAISKIFGSEAAWSVTDECIQILGGTG 419

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           ++ +  + R  R+     I  G+ + + L V L  ++      + L   L   LG+S   
Sbjct: 420 FMTDGGVERVLRDLRIFRIFEGTNDILRLFVSLQGMQSAGKELKSLQKALSNPLGNSS-- 477

Query: 483 VITILRDSISLCKEDKGLARFLTEK 507
              +LR+ +   +   GL+  L+ K
Sbjct: 478 --LLLREGMKRVRRKAGLSSGLSLK 500


>gi|85710896|ref|ZP_01041957.1| Glutaryl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85695300|gb|EAQ33237.1| Glutaryl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 19/260 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D A++ ++  K   G Y ++G K W  +
Sbjct: 114 FGNEQQRKKYLPKLATGEWVGSFGLTEPDAGSDPASMRTKAIKTEAG-YRITGSKMWITN 172

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSN 293
           SP++D F++ A+ +G +  F++ R ++     GL    ++ K   R++ T E+   E   
Sbjct: 173 SPIADVFVVWAKCDGDIVGFILERGMK-----GLSTPEIEGKFSLRASITGEIVMDEVEV 227

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           +    L ++    GP   +    Y   A  ++         A  Y   R   G  L    
Sbjct: 228 SEEQRLPNVRGLKGPFSCLNKARY-GIAWGAMGAAEFCWHAARQYTLDREQFGRPLAANQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I      + +     D  +     AA + I     K   C  A  +  
Sbjct: 287 LIQKKLADMQTEIGLGLLAALQAGRELD--RKTLNPAAISLI-----KRNNCGKALDIAR 339

Query: 414 EAMECIGGSGYIEERSIARH 433
           +A +  GG+G  +E  + RH
Sbjct: 340 QARDMHGGNGISDEYHVIRH 359


>gi|313205570|ref|YP_004044747.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312444886|gb|ADQ81241.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022702|gb|EFT35727.1| Acyl-CoA dehydrogenase, short-chain specific [Riemerella
           anatipestifer RA-YM]
 gi|325335002|gb|ADZ11276.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 592

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 46/291 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  ++  +D F   A+++    +  F+
Sbjct: 147 LTEPDAGSDANSGKTKARLSEDGKHYIINGQKMWISNAGFADTFTFFAKIDDDKNITGFV 206

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V R  E  +P  L +   ++K+G R+++T ++ F+              N F   L  LN
Sbjct: 207 VNRS-ELENPESLTFGEEEHKLGIRASSTRQVFFNDMKVPVECLLGERNNGFKIALNALN 265

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V           I L +A +     R  L+ +I YA  R   G  +     +++ +A++A
Sbjct: 266 VGR---------IKLAAACLDAQ--RRILSYSIQYANERKQFGTSISTFGAIRKKVAEMA 314

Query: 364 LDIAAATALSFRLANSF--------------DEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             I  + A S+R A                  EA+ +  E  YA +   I K +   +  
Sbjct: 315 TGIFVSEAGSYRAAKDVQDKIDELVAGGMNHQEAELKGVE-EYA-VECSILKVFVSDLLQ 372

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               E ++  GG G+ E+  +   +R+S  + I  G+     L  + +L K
Sbjct: 373 QSADEGIQIFGGMGFSEDTPMEAAWRDSRISRIYEGTNEINRLLAVGMLIK 423


>gi|325676122|ref|ZP_08155803.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553032|gb|EGD22713.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 397

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 57/317 (17%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+A   T    +D+ P++ + E   T  A            ++E   G+D+AAI ++ 
Sbjct: 99  AYMIARHGTEAQKQDYLPRMATGE---TRGA----------FSMSEPELGSDVAAIRTRA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RVGCFLVPRLLEDGS-PNG 269
           ++  DG Y + G K +L++  S   +  ++   EG       +  FLV +    G+   G
Sbjct: 146 RRGDDGDYTIDGQKMWLTNGGSSTLVAALVRTDEGAERRHDNLTTFLVEKPAGFGTVAPG 205

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L      +K+G +   T EL F         D +   G          +D     V   R
Sbjct: 206 LTVPGKIDKMGYKGIDTTELVFDG----YRADADAILGGAPGQGFRQMMD----GVEVGR 257

Query: 330 VSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL---SF 374
           V++A             A  YA++R   G  +     +   +A++A  + AA  +   + 
Sbjct: 258 VNVAARACGVAIRAFELAARYAQQRSTFGKPIAQHQAISFQLAEMATKVEAAHLMMVNAA 317

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL +S D             + A + KY   +    V  ++    GG GY +E  I R  
Sbjct: 318 RLKDSGDRND----------VAAGMAKYLASEYCAEVTQQSFRIHGGYGYSKEYEIERLM 367

Query: 435 RESPANSILLGSGNAMV 451
           RE+P   +L+G G + +
Sbjct: 368 REAP--FLLIGEGTSEI 382


>gi|322418810|ref|YP_004198033.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320125197|gb|ADW12757.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 35/296 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T   IG   LTE   G+D  AIT+  ++  D  + ++G K F+++
Sbjct: 101 FGTEAQKKKWLPALNTGRTIGCFLLTEPDAGSDAGAITTTYRRDGDH-FVVNGSKIFITN 159

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  ++ A  +  +    +   + D    G+   + +NK+G R         S T  
Sbjct: 160 GGYKGTGVLFASFDKSLKHKGISAFIIDLQSPGVEILKNENKMGIRG--------SYTTA 211

Query: 297 FLLGDLNVSTGPVEDM--------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F L  + +   PVE++        KI +  L+   + ++   + +AE     A+ Y++ R
Sbjct: 212 FALDGVRI---PVENLLGEEGQGFKIAMDTLNGGRIGIASQALGIAEGAFERALAYSKER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  +AD+   I  +  ++++ A   D  K+ + E+A  +++A     
Sbjct: 269 KQFGHPICELQAIQFKLADMYTRIETSKLMTYKAACLKDAKKNYTAESAMCKLLAS---- 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + A  V  EA++  GG G+I +  + R YR++    I  G+     + +  +L
Sbjct: 325 ---EAATYVTKEAIQIHGGYGFICDYEVERMYRDAKITEIYEGTNEVQRVVISKIL 377


>gi|225717936|gb|ACO14814.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor [Caligus
           clemensi]
          Length = 272

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G+D +++ ++  K  DG + ++G K W  +
Sbjct: 136 FGTEEQKEKYIPRLATGEILGCFGLTEPNHGSDPSSMETKAVKNPDGSWTINGSKNWITN 195

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           SP++D F++ A  +  V  F    +LE G P GL   R++ K   R++ T
Sbjct: 196 SPIADVFMVWASTKDGVQGF----ILEKGMP-GLSAPRIEGKFSLRASTT 240


>gi|158315835|ref|YP_001508343.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111240|gb|ABW13437.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 50/290 (17%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P+  +  A+G  GLTE   G+D     +  Q + D  + ++G K F+++  +D   ++  
Sbjct: 113 PVLASGRALGAFGLTEPGAGSDAGGTRTTAQLVGD-EWVINGSKAFITNSGTDITRVVTV 171

Query: 249 -------VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                  V GR  +   +VP +   G   G  Y    +K+G  ++ T  L F        
Sbjct: 172 TAVTGEPVNGRPQISSIIVP-VPTPGFSAGAPY----SKVGWHASDTRPLSFQ------- 219

Query: 300 GDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345
            D+ V   P E++           L  LD   +++S + V LA     E++ YA+ R   
Sbjct: 220 -DVRV---PAENLLGERGRGYANFLSILDEGRIAISALSVGLAQACVDESVKYAKEREAF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G      P+ +     IA  +A     ++    ++ +A  R       +  A + K +  
Sbjct: 276 GA-----PIARNQA--IAFKLAEMETRTYVARTAYYDAAWRMLAGLPFKKEAAMAKLFSS 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + A     EA +  GG G++ E  +ARH+R+S    + +G G + V  +L
Sbjct: 329 EAAVTNAREATQIHGGYGFMNEYPVARHWRDS--KILEIGEGTSEVQKML 376


>gi|307330543|ref|ZP_07609684.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306883792|gb|EFN14837.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 391

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 34/276 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ +S+ + ++A
Sbjct: 119 APLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FYVLNGVKRWITNAGVSEYYTVMA 177

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
             +       +  F+V    E G P G+ +   + K+G + + T E+   N       ++
Sbjct: 178 VTDPEKRSKGISAFVV----EKGDP-GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMI 232

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           G+    TG    MK L   D   ++++   + +A+     A  Y + R   G  + D   
Sbjct: 233 GEEG--TGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQG 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPA 410
           ++  +AD+A+ + AA  L++  A     AKS    A   +          K +    A  
Sbjct: 288 VQFMLADMAMKLEAARQLTYAAA-----AKSERVFAGGGKEDLTFFGAAAKCYASDAAME 342

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 343 ITTDAVQLLGGYGYTRDYPLERMMRDAKITQIYEGT 378


>gi|317123544|ref|YP_004097656.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587632|gb|ADU46929.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 36/325 (11%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             AG+L+  +   + ++    T      W P I S E  P              + +TE 
Sbjct: 81  FNAGYLIINTALISDIIVRNATDEQKAAWLPGIASGETIPC-------------ICITEP 127

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
             GTD A++  +    +D   + L G K  ++  M SD  ++LA+  G     +    ++
Sbjct: 128 GHGTDAASLELKATPSADATGWTLHGEKTSITLGMASDRAVVLARTGGPGARGVSAFWVD 187

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
              P+    +   + +G+R+     L F  T      L+G+     G V  M+   Y  +
Sbjct: 188 LHHPS--VSRSAFDDLGSRAIGRASLHFDGTPVSRADLIGEEGA--GFVSVMQGFDYSRA 243

Query: 321 AI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            I  + +   + SL EAI +AR R   G  +     +   +A+ A  +  A  + F    
Sbjct: 244 IIGLLCIGAAQASLDEAIQWARDREAFGAPIGTFQGVSFPLAEAATYLKGARHVCFEALW 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  S EAA A       K+W  K+A  VI + +  IG  GY  E  + +  R+  
Sbjct: 304 RKDTDQEHSAEAAMA-------KFWAPKLAADVIHQCLLTIGHIGYSSEHKVGQRLRD-- 354

Query: 439 ANSILLGSGNAMVLDVL---NLLEK 460
              + +G G A V  ++   NLL +
Sbjct: 355 VIGLEIGDGTAQVSKLVISRNLLGR 379


>gi|307296269|ref|ZP_07576096.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878071|gb|EFN09294.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 411

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 47/282 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+    + +   +TEK  G D   + ++ ++  DG Y L+G KWF S +  +D  +++A 
Sbjct: 119 PLLNGEMRVCYSMTEKAAGADATGMQTRAERQEDGSYLLNGDKWFSSAASHADIAVVMAM 178

Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-------NATVELEFSNTF 295
            +       R   F+V     D   +G C +R    +  +S       +A  E+E SN  
Sbjct: 179 TDPTAPRHKRYSTFIV-----DIPSDGFCIKRDIPTMALQSPLDAMLRHAHSEIEISNVK 233

Query: 296 ------------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
                       GF +G   ++ G          L   + +V+  + +L         R 
Sbjct: 234 VPSENILGGEGNGFSMGQHRLAYG---------RLRHGMHNVAIAQRALDMTTERVIGRS 284

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L D+  ++  +A+ A  +  A  +   +A        ++E+    R    I K +
Sbjct: 285 TFGKLLADRQAVQFMLAECASKLYVARLMILHIA-------YKAEKGLDLRHENSIAKVY 337

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              M  +V+  A++  G  GY ++  +AR Y +  A  ++ G
Sbjct: 338 LASMVHSVVDIAIQLHGALGYSQDTPLARWYTQVRAQRLVDG 379


>gi|289741273|gb|ADD19384.1| medium-chain acyl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 420

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 31/277 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +  +++ + +LA+     +      
Sbjct: 156 VTEPVAGSDVAGIRTRAEKKGDE-YIINGQKMWITNGGVANWYFVLARTHPDPKAPASKA 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R++ T  + F +     +   NV  G     KI +
Sbjct: 215 FTGFIVERETP-GLTPGRKEINMGQRASDTRGITFEDV---RVPKENVLIGEGAGFKIAM 270

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA+ Y+  R   G  +     ++  +AD+A+ +   +
Sbjct: 271 GTFDKTRPPVAAGAVGLAQRCMDEALKYSLDRKTFGVPIAYHQAVQFMLADMAVGV-ETS 329

Query: 371 ALSFRLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L++RLA    D+ +  S  A+ A+  A         MA  V ++A++  GG+G+  +  
Sbjct: 330 RLAYRLAAWEIDQGRRNSYYASIAKCHA-------ADMANKVASDAVQIFGGNGFNSDYP 382

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           + +  R++    I  G+     L +        N+FE
Sbjct: 383 VEKLMRDAKIYQIYEGTSQIQRLII------SRNMFE 413


>gi|309788493|ref|ZP_07683097.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|308923875|gb|EFP69378.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
          Length = 383

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPDAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D  +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADLHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|297529060|ref|YP_003670335.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297252312|gb|ADI25758.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 404

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 12/100 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVG-----C 255
           LTE   G+D + I +  +K+ DG Y L+G K F+++    +++++ A V+ ++G      
Sbjct: 138 LTEPEAGSDASGIRTTAKKV-DGGYLLNGQKIFITNGARASWVVVFATVDPKLGRAGHRA 196

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           F+V    E G+P G    R  +K+G R+N T EL F + F
Sbjct: 197 FVV----EKGTP-GFVATRTVHKMGLRANETAELLFEDCF 231


>gi|118471201|ref|YP_886559.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172488|gb|ABK73384.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 397

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 42/255 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253
           LTE   G++ A + ++   + DG  + ++G K F++ +P +  F++ A+          +
Sbjct: 135 LTEPGAGSNPAGLRTK--AVRDGSDWVINGQKRFITNAPTAGLFVVFARTRPADADGAGI 192

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPV 309
             FLVP         G+       K+G     T ++ F+        D+ V      G  
Sbjct: 193 AVFLVP-----ADTPGVEVGPKDAKMGQEGAWTADVNFT--------DVRVPAAALVGGS 239

Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           ED+     + S        A ++V   + +L E++ YA      G  + +  +++  IAD
Sbjct: 240 EDVGYRAAMTSLARGRVHIAALAVGTAQRALDESVAYAATATQGGQPIGNFQLVQAMIAD 299

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               + A  AL    A  +   + R       RI     K +C +MA  V   A++  GG
Sbjct: 300 QQTGVMAGRALVRDAAQKWVTGEDR-------RIAPSAAKLYCTEMAGTVADLAVQIHGG 352

Query: 422 SGYIEERSIARHYRE 436
           +GY+ E  + R YRE
Sbjct: 353 TGYMREVPVERIYRE 367


>gi|320179596|gb|EFW54545.1| Crotonobetainyl-CoA dehydrogenase [Shigella boydii ATCC 9905]
 gi|332095325|gb|EGJ00348.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           5216-82]
          Length = 380

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPSAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|163787256|ref|ZP_02181703.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159877144|gb|EDP71201.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 392

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE   G++   + +  + + D  Y L+G K W  +SP     ++ A+  EGR+   +
Sbjct: 136 FGLTEPDHGSNPGGMVTNFKDMGDH-YLLNGAKMWISNSPFCQIAVVWAKNEEGRIHGLI 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           V R +E     G       NK   R++AT EL F N       LL + +    P      
Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAP------ 243

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  LDSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A
Sbjct: 244 LGCLDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++RL    +   + S + + A       K     MA  +  +A + +GG G   E S
Sbjct: 304 QLLAWRLGVMREAGTATSAQISMA-------KRNNVDMALTIARDARQMLGGMGISGEYS 356

Query: 430 IARH 433
           I RH
Sbjct: 357 IMRH 360


>gi|229495254|ref|ZP_04388989.1| acyl-CoA dehydrogenase family protein [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317697|gb|EEN83595.1| acyl-CoA dehydrogenase family protein [Porphyromonas endodontalis
           ATCC 35406]
          Length = 576

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 31/291 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQG--QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           + + LTE   G+D+ A+  +    +  D  Y L+G K F+++  S   ++LA+ E   R 
Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEQEDAWY-LNGVKRFITNGDSHIHLVLARSEEGTRD 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G  L   + +  +  G+  +R+++K+G +   T EL FSN    L G+  +  G ++   
Sbjct: 230 GRGLSMFIFDSKNNPGVTVRRIEHKMGIKGVPTCELVFSNAKAELCGERRL--GLIK--Y 285

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAA 368
           I+  ++ A + +    V L+EA +         R   G  + + P +   ++ +     A
Sbjct: 286 IMALMNGARLGIMSQAVGLSEAAYQEAYAYAIERKQFGQTIDNFPAVYEMLSIMRAKTDA 345

Query: 369 ATALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAV 411
           + A  +      D  K+              R E   Y R+     PI K    + A   
Sbjct: 346 SRAHLYETCRFVDMYKTLEDIQRERKLTPEERKELKYYTRLADAFTPIGKGLSTEFANQN 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           + + ++  GGSGY+++ +  R YR+    +I  G+    V+  +  +  GT
Sbjct: 406 VYDCVQIHGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT 456


>gi|118161365|gb|ABK64048.1| putative acyl-CoA dehydrogenase pigA [Janthinobacterium lividum]
          Length = 382

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 40/271 (14%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-S 237
           SRE      + M K S+     +TE   G+D+ A+ S  ++  DG  Y L+G K F++ +
Sbjct: 105 SRELHERYLSGMAKGSLIAANAITEPGSGSDVFAMRSSARR--DGEHYILNGEKCFVTNA 162

Query: 238 PMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE 290
           P++D F++ A+ +       +  FLVPR       +GL     + K G  ++   +V LE
Sbjct: 163 PVADVFLLYAKTDEHQSYFGISAFLVPR-----GTHGLTVTTGERKSGLCTSPWGSVHLE 217

Query: 291 FSNTFGFL-LGDLNVSTGPVEDMKILIYLDSAIMS--------VSGMRVSLAEAIHYARR 341
                 +  +GD        E     I+ DS I          V  M   L + + +AR 
Sbjct: 218 DCRVPVWARVGD--------EGAGATIFHDSMIWERGCLFAAYVGAMERVLQQCVTHARE 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     +   + D  L +  +  L +R    +D+     E  A        +K
Sbjct: 270 RKQFGRPIGHNQAVSDRLVDFKLRLETSRLLLYRAGWLYDQGLPHEEAIAQ-------SK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            W  + A     +A++  GG+G   E  I R
Sbjct: 323 LWVSECAVQCGLDAVQIFGGAGVCSETGIDR 353


>gi|322368089|ref|ZP_08042658.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
 gi|320552105|gb|EFW93750.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
          Length = 387

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 23/246 (9%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VE 250
           A+G  GLTE   G++ + + +  +K  D  Y L+G K W  +SP+SD  ++ A+     +
Sbjct: 124 AVGCFGLTEPEHGSNPSGMETYAEKEGDE-YVLNGSKTWITNSPISDVAVVWARDRSAED 182

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             V  FLV     +   +G+   ++ +K+  R++ T E+   N       +L  +    G
Sbjct: 183 SPVRGFLV-----ETDRDGVTTNQIHDKLSLRASITGEISLQNVTVPEDAVLPGVEGMKG 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           P+  +    Y   A  +V   R     A  YA  R   GG +    + +  +A++A  I 
Sbjct: 238 PLSCLTQARY-GIAWGAVGAARDCFETARDYATERDQFGGPIARFQLQQDKLAEMATQIT 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L  RLA+  +    R +  + A       K    +MA      A E +GG+G   +
Sbjct: 297 TSQLLVHRLADLKERGDLRPQHVSMA-------KRNNVRMARDQARVAREMLGGNGITTD 349

Query: 428 RSIARH 433
               RH
Sbjct: 350 YPPMRH 355


>gi|300933555|ref|ZP_07148811.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 389

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 115/251 (45%), Gaps = 11/251 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE+  G+D AA+ ++  +  D  + ++G K F+++   S  + ++A  +   G   +  
Sbjct: 130 LTEREAGSDAAAMKTRAVRDGDE-WVINGSKCFITNGGRSSWYTVMAVTDPEAGARGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            +      G     L++K+G + + T EL F +       ++G+    TG    ++ L +
Sbjct: 189 FMVHKDDPGFRVGGLEHKLGIKGSPTAELYFEDCRVPASRMIGE--EGTGFKTALQTLDH 246

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I   ++   + +  EA+ Y + R   G  + D    +  +AD+ + I AA  + + 
Sbjct: 247 TRPTIGAQALGIAQGAFDEAVKYVKERKQFGKSIADFQNTQFMLADMKMKIDAARLMIYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ +  +  +E      +MA  +K +   +A  V  +A++ +GG G+  +  + R  R
Sbjct: 307 AASNAE--RGFAEGGDKLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPLERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|162455254|ref|YP_001617621.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161165836|emb|CAN97141.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 379

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 129/316 (40%), Gaps = 41/316 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++A + TP   + W P++ S     T  A             TE   G+D+A++ ++ 
Sbjct: 87  ALLLARVGTPAQRRAWLPRMASGACMATVAA-------------TEAGAGSDVASVQARA 133

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPN 268
            + +D  Y L+G K +++ +  +D ++ +A+  G          +   LVPR   DG+  
Sbjct: 134 DR-TDAGYRLTGDKRYVTWADRADVYLAIARDGGGRAGGAPARGLTALLVPRAAGDGAAR 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIM-- 323
            L    L    G R      + F+        LLG        +   +I +  + A++  
Sbjct: 193 VLPGAPLATA-GLRGARLAPVSFAGCEVGHDALLGRAGAG---LAVFQIAMTFERALILA 248

Query: 324 -SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M  +L EA+ + R R + G  +     +   +A + L +  +  L +R A + D+
Sbjct: 249 FRLGAMERALGEAVRFTREREIGGQAIARHQAVAHRLARMKLRLETSRLLIYRAAWALDQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EAA A       K+     A A   + +   GG+GY+EE  +     ++   SI
Sbjct: 309 GERGQAEAALA-------KWHTADSAVASALDDLRLRGGAGYLEESGLPSAIDDALGGSI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ + +   V   L
Sbjct: 362 HSGTSDVLATIVARWL 377


>gi|17546481|ref|NP_519883.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17428779|emb|CAD15464.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 625

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 74/323 (22%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252
           L+E + G+ ++ I +    +G+      Y L+G+K ++S+    +SD  +  +LA++ G 
Sbjct: 164 LSEPQAGSSLSDIATRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223

Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L       G  N +    L +K+G R      L F      
Sbjct: 224 DGKPIPGVKGISLFIVPKFLVGADGALGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283

Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335
                     +   G+L+G+      P + +  + ++ +      GM  ++        A
Sbjct: 284 RPKGPDGQPRAGAIGYLVGE------PHQGLACMFHMMNEARIGVGMGATMLGYTGYLHA 337

Query: 336 IHYARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + YAR R     I             ++D   ++R +      +  A  L+   A   DE
Sbjct: 338 LDYARNRPQGRPIGPAGKDAASPQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397

Query: 383 AK-SRSEEAAYAR--------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + + SE  A AR        I+ PI K W  +      + A++  GG GY  E ++ + 
Sbjct: 398 ERGAESEGDADARATLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQF 457

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
           YR++  N I  G+     LD+L 
Sbjct: 458 YRDNRLNPIHEGTHGIQGLDLLG 480


>gi|255318962|ref|ZP_05360187.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378302|ref|ZP_06071459.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303979|gb|EET83171.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299587|gb|EEY87499.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 399

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 40/268 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254
           + +TE   G+D AAI +    I DG  Y L+G K F++S   +D+ ++ A ++ ++G   
Sbjct: 130 MAITEPDCGSDSAAIRTTA--IKDGTDYILNGEKIFVTSGQRADSIVVWATLDPKLGRAA 187

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTG 307
              F+VP+    G+P G+  +RL++K+G +++ T  + F N       LLG  D++++ G
Sbjct: 188 IKSFVVPK----GTP-GMKVERLEHKLGIKASDTAAISFINCRVPAENLLGNPDIDIAKG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ----PVMKRA----- 358
               M+     D+    V+ M V  A A    R + +    L DQ    P ++ +     
Sbjct: 243 FAGVMET---FDNTRPLVAAMAVGCARA-SLERIKEIFKDQL-DQNYATPYLQTSYLAAQ 297

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           I  +  +  AA  L+ + A   D  K  S+EA+ A+  A        ++   +  + +E 
Sbjct: 298 IYRMEAEWEAARLLTLKAAWMADNKKPNSKEASIAKAKA-------GRIGNEITLKCVEL 350

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            G  GY E+  + +  R+S    I  G+
Sbjct: 351 AGSVGYGEDELLEKWARDSKILDIFEGT 378


>gi|126643068|ref|YP_001086052.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 323

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 34/288 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 53  QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 97

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 98  SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRTGFTKGKPLNKIGMKGQDTCE 157

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG      G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 158 LFFDNVRVPKENLLG--MEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 215

Query: 344 VSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             G  +      +  +A++  +I    T L   +    DE  S    AA         KY
Sbjct: 216 AFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAA--------AKY 267

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 268 KISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIM 315


>gi|154250919|ref|YP_001411743.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154869|gb|ABS62086.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 385

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 118/305 (38%), Gaps = 41/305 (13%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W PK+ S E             +   + +TE   G+D+  + +  +K S   Y
Sbjct: 109 TEDQKKKWLPKMASGE-------------IVGAIAMTEPGTGSDLQGVKTTAKK-SGNQY 154

Query: 227 CLSGHKWFLSSPMSDAFI-MLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++G K F+++      I ++A+ +   G  G  L+  ++E     G    R   K+G +
Sbjct: 155 VVNGQKTFITNGQQANLICVVAKTDPAGGAKGTSLI--MVETDEVEGFRRGRNLKKMGQK 212

Query: 283 SNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333
           +  T EL F       SN  G   G      G  + M+ L    L  A+ +   M ++L 
Sbjct: 213 AQDTSELFFDEVKVPTSNLLGTEEGK-----GFFQLMQQLPQERLIIAVQACVAMEMALK 267

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y + R   G  ++D    +  +A+   +   A       A    + K  +  AA A
Sbjct: 268 YTTDYVKERTAFGQRILDFQNTQFKLAECKTEATIARVFVDDCAVKLLDGKLDATTAAMA 327

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K+W  +    +I   ++  GG GY+ E  IA+ Y  +    I  G+   M + 
Sbjct: 328 -------KWWTTQKENEIIDTCLQFFGGYGYMMEYPIAKLYTNARIQKIYGGTNEIMKML 380

Query: 454 VLNLL 458
           V   L
Sbjct: 381 VARTL 385


>gi|326329900|ref|ZP_08196215.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952291|gb|EGD44316.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 404

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 27/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D A I +      D  Y L+G K F++S   SDA ++ A ++  +G   +
Sbjct: 134 MAITEPGTGSDSANIKTTATLDGDH-YVLNGEKIFVTSGDRSDAVVVWATLDKELGKAAI 192

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTGPVEDM 312
              ++E G+P G+  +RL++K+G +++ T  + F++       LLG  ++NV  G    M
Sbjct: 193 KSFVVEKGTP-GMKVERLEHKLGIKASDTATITFTDCRVPAENLLGSPEINVKEGFAGAM 251

Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILID-------QPVMKRAIADIAL 364
                 D+    V+ M V  A  A+ Y R      G+ ID       Q         +  
Sbjct: 252 AT---FDNTRPLVASMAVGCARAALDYTRDLLEKAGVEIDYDRPAHLQSAAAAKFIQLES 308

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D   A  L  + A   D  +  S+EA+ A+  A        +M   V    +E  G  GY
Sbjct: 309 DYEGAYLLMLQAAWMADNRQPNSKEASMAKAKA-------GRMGSDVTLSCVELAGTIGY 361

Query: 425 IEERSIARHYRESPANSILLGS 446
            E   + +  R+S    I  G+
Sbjct: 362 SEGELLEKWARDSKILDIFEGT 383


>gi|147677910|ref|YP_001212125.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274007|dbj|BAF59756.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 379

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K+F L+  ++D +++ AQ     G   L   ++E G P G   +R   K+G R+
Sbjct: 148 YLLNGKKYFVLNGGVADIYVVFAQTGQSAGMKGLSAFIVEAGIP-GFKVKRQIEKMGLRA 206

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T E+ F  T      LLG  N     ++D      + +A       + +L  ++ YA+
Sbjct: 207 QPTAEMVFEKTRVSRENLLGAENQGYEILKDTLAFAGVAAAAQVAGICQTALELSVKYAK 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     ++  +AD+A ++      +++ A+   E K+ + EAA AR+ A   
Sbjct: 267 ERVQFGRPIACLQAIQWMLADMAANVHMIRLATYKAASLIQEDKTIAYEAAIARMFA--- 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +    V  +A++  GG GY +E  + R  R+
Sbjct: 324 ----ARAGVDVCMDAVQIHGGYGYGKELIVERLLRD 355


>gi|317494106|ref|ZP_07952522.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917879|gb|EFV39222.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I+ +A+        +   
Sbjct: 124 ITEPGAGSDVGSMQTSYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDAASPDKPVFSE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++        VELE  + FG      N      +  +
Sbjct: 183 WFVDMSKPGVKVNKLE-KLGLRMDSCCEILFDNVELEEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            ++    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FIV----ALTNYGTAFCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F  A   D     S +AA       + KY+C   A  V+  AM+ +GG G   +  I R 
Sbjct: 298 FEAAWKSDNGLMTSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGDHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|260427439|ref|ZP_05781418.1| glutaryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260421931|gb|EEX15182.1| glutaryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 406

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  K ++G Y L G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAIK-TEGGYRLKGAKMWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP----VED 311
           F    +LE G   GL   ++  K+  R++ T E+        +L D+ V        VE 
Sbjct: 207 F----VLEKGM-KGLSAPKIGGKLSLRASITGEI--------VLDDVEVGEEALLPNVEG 253

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALD 365
           +K     L+ A   ++   +  AE      R++       D+P     + ++ +AD+  +
Sbjct: 254 LKGPFGCLNRARFGIAWGVMGAAEFCWMQARQYGLDRKQFDKPLAGTQLYQKKLADMQTE 313

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA     + R+    D AK+  E       M  + K   C  A  +   A +  GG+G  
Sbjct: 314 IALGLQAALRVGRLMDSAKAAPE-------MISLIKRNNCGKALDIARMARDMHGGNGIQ 366

Query: 426 EERSIARH 433
            E  + RH
Sbjct: 367 IEYGVMRH 374


>gi|229159767|ref|ZP_04287775.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           R309803]
 gi|228623704|gb|EEK80522.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           R309803]
          Length = 386

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 123/277 (44%), Gaps = 35/277 (12%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           ++ W P +FS   +   K  +   +       +  RGG        +G+K     + ++G
Sbjct: 101 NRSWKPDMFSWFCEEVKKGALFNRAATERNTGSPTRGGKPETLAVQKGEK-----WVING 155

Query: 231 HKWFLS-SPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            K F + +P+ D FI+ A +EG   +G F++PR        G+  +   + +  R  A+ 
Sbjct: 156 RKTFTTMAPVLDYFIISASIEGSEEIGEFVIPR-----HEKGVFIEETWDSVAMRGTASH 210

Query: 288 EL-----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           +L     E +N +   L D+  S    + +  L+++ +  + ++  + +   AI +A+  
Sbjct: 211 DLILKNVEIANKY---LTDIKDSKTKPKGIGWLLHIPACYLGIA--QAARNYAIDFAKSY 265

Query: 343 HVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
             +    +  P+     ++R + ++ L++  A    +++A  +DE + +  ++  A + A
Sbjct: 266 QPNS---LSHPISLLPNVRRLVGELELELLQARMFLYQIAKKYDEIEDK--QSLQAELAA 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              KY     A +V+ +AM  +G     E   + R+Y
Sbjct: 321 --AKYIVTNTAISVVDKAMRIVGAKSLSETNPLHRYY 355


>gi|254428949|ref|ZP_05042656.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195118|gb|EDX90077.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 386

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 27/273 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           P   T   IG + +TE   G+D+  + +   K  D  Y L+G K F+++   +D  I++A
Sbjct: 118 PKMVTGEMIGAIAMTEPGAGSDLQGVKTTAVKDGDH-YVLNGSKTFITNGQNADIVIVVA 176

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           + +   G   +   + +    G    +   K+G ++  T EL F +       LLG+  +
Sbjct: 177 KTDPTKGAKGISLFVVETDSEGFEKGKNLKKVGMKAQDTSELFFQDVRVPAENLLGEEGM 236

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G V  MK L    L  +I  ++    +LA  I Y + R   G  +      +  IA++
Sbjct: 237 --GFVYLMKELPQERLGISIGGLAMAESALAHTIEYVKERKAFGKPIAGFQNTQFKIAEM 294

Query: 363 ALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
              +  A A     L   L    D               A   KY+   +   VI E ++
Sbjct: 295 HTKLEVARAYVDRCLELHLKKELDIP------------TAAAGKYYITDLQCEVIDECLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IAR + +S    I  G+   M
Sbjct: 343 LHGGYGYMWEYPIARMFADSRVQRIYGGTNEIM 375


>gi|89902922|ref|YP_525393.1| butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89902931|ref|YP_525402.1| butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89347659|gb|ABD71862.1| Butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89347668|gb|ABD71871.1| Butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
          Length = 383

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 34/268 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LGLTE   G+D+ AI +   K+    Y ++G K W  +S      ++L + +        
Sbjct: 121 LGLTEPNAGSDLQAIRTVA-KLDGDHYVVNGSKTWITNSLHGHMTLLLVKTDPEA----Q 175

Query: 259 PR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305
           PR      L+ +  P      +LK K+G R+  T +L F        N  G + G   + 
Sbjct: 176 PRHKGMSMLIAEKGPGYNVDGKLK-KMGYRAIDTCQLSFDDYRVPKENLLGGVEGRGFIQ 234

Query: 306 T-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           T G +E  +I +    A ++      SL  A+ YA+ R   G  +     ++  +AD+  
Sbjct: 235 TAGGLELGRINVASRGAGIAEG----SLKMALRYAQERSAFGKPIWQHQAIQLKLADMVT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A  L    A  +D  +    EAA A++        C +       EAM   GG   
Sbjct: 291 QVEGAKRLIENAARKYDSGERCDLEAAMAKLAGSEAGVHCSQ-------EAMRIFGGYSL 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
             E  I R YR+S    +++G G   +L
Sbjct: 344 SVEYEIERFYRDSML--MVIGEGTNEIL 369


>gi|220912152|ref|YP_002487461.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219859030|gb|ACL39372.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 396

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 32/275 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W P I++          ++K       GLTE  GG+D+A  T    +     + L+G
Sbjct: 122 QEEWLPDIYA----------LKKIG---AFGLTEPLGGSDVAGGTRTTARRDGDTWILNG 168

Query: 231 HK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS--NA 285
            K W  ++  SD  ++ A+   + +V  FLV     D +  G    +++NKI  R+  NA
Sbjct: 169 AKRWIGNATFSDWVVIYAKDVADNQVKGFLV-----DTALPGFSATKIENKISLRTVQNA 223

Query: 286 TVELEFSNTFGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            + LE      F  L + N S   V  +  +  L  A  +V     +   A  YA  R  
Sbjct: 224 DIVLEDVVVPDFFRLANAN-SFRDVNKVLKVTRLAVAWQAVGQQLAAFDVARSYAVEREQ 282

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    +++  +  I  +  ++  +  RLA   D+  ++ E++A A       K + 
Sbjct: 283 FGRPLASFQLIQNQLVQILGNAVSSMGMMVRLAQLEDDGLAKDEQSALA-------KAFT 335

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +     +A     +GG+G + +  +A+ + ++ A
Sbjct: 336 TERMRESVALGRSILGGNGIVTDYGMAKIFADAEA 370


>gi|149377621|ref|ZP_01895359.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358094|gb|EDM46578.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 381

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 26/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIML 246
           P   T   IG + +TE   G+D+  + +   K + G  Y L+G K F+++  ++D  I++
Sbjct: 113 PKLATGEMIGAIAMTEPGAGSDLQGVKTTAVKNASGDHYVLNGSKTFITNGQLADLVIVV 172

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A+ + + G      LL + +  G    +  NK+G ++  T EL F +       LLG + 
Sbjct: 173 AKTDPKEGAKGTSLLLVESAWEGFEKGQNLNKVGMKAQDTSELFFQDVKVPADKLLGSME 232

Query: 304 -------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  ++  P E +++       + +V+    +    + Y + R   G  +I     +
Sbjct: 233 GQGFFQLMAELPAERLQV------GLTAVAAAEAAWEWTLDYVKERKAFGKPVIAFQNTR 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++  +I AA     R      E K     AA   ++   T    CK    V+ E +
Sbjct: 287 FKMAEMKAEITAARVFCDRCLELHLEKKLDIPTAA---MLKQHTTDLQCK----VMDECV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR + +S    I  G+   M
Sbjct: 340 QLHGGYGYMWEYPIARAWADSRVQRIYAGTNEIM 373


>gi|67642897|ref|ZP_00441648.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121600127|ref|YP_993855.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124383525|ref|YP_001026919.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Burkholderia mallei NCTC 10229]
 gi|121228937|gb|ABM51455.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|238524113|gb|EEP87548.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 44/217 (20%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  T      + PK+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258
           D+A + S+ +   DG Y + G K F++     M+D  + L         EG  G   F+V
Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L  +DGS    N +    +++K+G +++ T  L++ +     G+L+G+ N     +E
Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
            M   I +++A   V    + +AE     A  +A+ R
Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKER 322


>gi|300918065|ref|ZP_07134686.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           115-1]
 gi|300414756|gb|EFJ98066.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           115-1]
          Length = 383

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +   YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDTARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|257452502|ref|ZP_05617801.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           3_1_5R]
 gi|317059043|ref|ZP_07923528.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684719|gb|EFS21554.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
          Length = 378

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 34/270 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI----MLAQVEGRVGCFL 257
           LTE   G+D +A  +   K  D  Y L+G K F+++    +F     M  + +G  G  +
Sbjct: 123 LTEPGAGSDASAGKTTAVKDGDS-YILNGRKCFITNGAVASFYCITAMTDKTKGVKGISM 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
              L+E G+P GL     +NK+G R+        SNT   +L D  +    +     E  
Sbjct: 182 F--LVEAGTP-GLSTGNHENKMGIRT--------SNTCDVVLEDCRIPASALVGKEGEGF 230

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I +  LD A   +  +   +A     EAI Y + R   G  +I    ++  IAD+ +  
Sbjct: 231 AIAMKTLDQARTWMGCIATGIAQRGINEAIAYGKERIQFGKPVIKNQALQFKIADMEIKT 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +        D     ++E+A       I K +   +A  V +EA++  GG GY  
Sbjct: 291 ETARQMVAHALTKMDLGLPFAKESA-------IAKCYAGDIAMEVASEAIQVFGGYGYSR 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E  + +  R++    I  G+     + + N
Sbjct: 344 EYPVEKLIRDAKIFQIFEGTNEIQRIVIAN 373


>gi|296270066|ref|YP_003652698.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092853|gb|ADG88805.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 398

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 27/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254
           ++E   G+D+AAI +   +  D  Y + G K +L++  S   I L    G  G       
Sbjct: 129 MSEPHCGSDVAAIRTTAVRSGDE-YVIHGRKMWLTNGASANLIALLARTGEDGGRPHANM 187

Query: 255 -CFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
             FL+ +    G    GL       K+G +   T EL        +  D  +   P +  
Sbjct: 188 TTFLIEKEPGFGETRPGLTVPGKIQKMGYKGVDTTELVLDGVR--VPADRVLGGEPGKGF 245

Query: 313 -KILIYLDSAIMSVS----GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +++  ++   ++V+    GM +   E AI YA++R   G  L     ++  +A++A  +
Sbjct: 246 YQMMDGVEVGRVNVAARACGMALRAFELAIRYAQQRETFGEPLHRHQAIRFRLAEMATKV 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  +    EA  A       KY   +    V+ +A    GG GY  
Sbjct: 306 EAAHQMMVMAARRKDTGERGDLEAGMA-------KYLAAEYCKEVVEDAFRIHGGYGYST 358

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
           E  I R YRE+P   +L+G G + +  ++
Sbjct: 359 EFEIERLYREAPM--LLIGEGTSEIQKMI 385


>gi|255073815|ref|XP_002500582.1| predicted protein [Micromonas sp. RCC299]
 gi|226515845|gb|ACO61840.1| predicted protein [Micromonas sp. RCC299]
          Length = 455

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 35/309 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGC 255
           I L +TE   G+D+A +    +   D        KW  +   +D F +  +    G    
Sbjct: 160 ICLCITEPGAGSDVANLACTAEDKGDHFLVNGNKKWITNGIYADYFTVAVRTGPPGSAHK 219

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L   L+E  S  G+   ++ + +G   + T  +EF N     +   NV     +  K +
Sbjct: 220 GLSMLLIERNSSPGITTSKM-DCMGVWPSGTTYIEFDNV---KVPKKNVVGRVGDGFKQI 275

Query: 316 IYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +Y  +      A  +    R  + E+I +AR R   G  LI+   ++  I ++A      
Sbjct: 276 MYNFNHERWLLAAQAARMARTCVEESIAFARSRRTFGKFLIEHQAIQHKIGEMARQCEGL 335

Query: 370 TA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A    ++F++     E ++R      A     + K    ++A    + AM+ +GG+GY 
Sbjct: 336 QAWLENVTFQMNTMSKEEQNRKLGGHIA-----LLKLSSSRVAEFCASNAMQVLGGAGYT 390

Query: 426 EE---RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
                  + R YRE  A +I  GS   M+           NL    F  + +       K
Sbjct: 391 RSGKGTKVERIYREVKAYAIPGGSEEIML-----------NLAAGQFGFVTRRAPDPRDK 439

Query: 483 VITILRDSI 491
           +I  L+D +
Sbjct: 440 IIKQLKDEL 448


>gi|194291552|ref|YP_002007459.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225456|emb|CAQ71402.1| ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN; putative Butyryl-CoA
           dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 379

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 23/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLV 258
             LTE R G++ A + ++     DG Y L G K F+S+  +  FI++ A+ +   G   +
Sbjct: 124 FALTEPRAGSNPADMATRATPEGDG-YRLRGVKHFISNAEAADFIVVYAKTDPAAGTRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDM 312
              + +   +G+     +  +G       E+        +N  G         TG    M
Sbjct: 183 SAFVVERHSDGVQVAPAEKLMGIHGAPAHEVALDCFVPAANRLG------PEGTGFRTAM 236

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+L    LD A  S+     +LA A+ +AR+R V G  L  +  ++   AD+   + AA 
Sbjct: 237 KVLDNSRLDVAATSLGIAEAALACAVDWARQRQVGGEPLARKQGLQWMFADMRTRLEAAW 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+ + A    + +  +E+A+ A       K +  +M   V   A++  GG G+  E  +
Sbjct: 297 LLTLQAAARRRDGEPFTEQASMA-------KLYASEMVGFVTDAALQIHGGYGFTREMPL 349

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  GS
Sbjct: 350 ERLVRDARILRIYEGS 365


>gi|146298219|ref|YP_001192810.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146152637|gb|ABQ03491.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +    + D  Y ++G K W  +   +  ++++AQ    +    +  
Sbjct: 125 LSEPEAGSDATSQKTTAIDMGDH-YLVNGTKNWITNGNTASVYLVIAQTHPELKHKGINA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
           L+      G      + K+G R + T  L F++             FGF      ++ G 
Sbjct: 184 LIMTKDMPGFSVGPKEQKMGIRGSDTHSLMFTDVKVPKENRIGEDGFGFKFAMKTLAGGR 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                  I + S  + ++     LA  + Y++ R   G  + +   +   +AD+A++I A
Sbjct: 244 -------IGIASQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMAVNIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A   D  K+     A A++ A        ++A     EA++  GG+GY++E 
Sbjct: 295 ARHLCMKAAWDKDNHKNYDVSGAMAKLFA-------SQVAMDTAVEAVQIHGGNGYVKEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|288923462|ref|ZP_06417584.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345195|gb|EFC79602.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 384

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253
           + LTE  GG+D+ A+T+  ++  D  Y +SG K W  ++  S    +L + + RV     
Sbjct: 121 MALTEPGGGSDLQAMTTTARQDGDE-YVVSGSKTWISNARRSQLIALLCKTDPRVEPAHT 179

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
           G  ++  L+E G   GL   R   K+G +   + E+ F      T   L G      G  
Sbjct: 180 GISVL--LVEHGP--GLTVSRDLPKLGYKGVESCEISFDGYRTPTSAVLGG--TPGRGFA 233

Query: 310 EDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           + MK L    I + S  + V+  + +L +A+ YA+ R   G  +     +   +AD+A  
Sbjct: 234 QMMKGLETGRIQVASRALGVA--QAALDDALAYAQERESFGRPIWKHQSIGNYLADMATK 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++AA  L+   A  +D  +    EA  A++ A        ++A  +   A+   GG GY 
Sbjct: 292 LSAARQLTLHAAELYDAGRRVDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYS 344

Query: 426 EERSIARHYRESPANSILLGSGN 448
            E  + R++R++P   +++G G 
Sbjct: 345 TEYDVERYFRDAPL--MIVGEGT 365


>gi|229004640|ref|ZP_04162378.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus mycoides Rock1-4]
 gi|228756681|gb|EEM05988.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus mycoides Rock1-4]
          Length = 354

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 38/277 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPR 260
           L+E   G+D   I ++ ++  + I+     KW   + ++D FI+LA   +G    F+V R
Sbjct: 95  LSEPTHGSDAKNIQTRYKREREKIFITGKKKWISFAGIADFFIVLATSNQGYTTAFIVDR 154

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILIYL 318
                   G+    +     +R+    E+EF+N     + + N+  + G      +   L
Sbjct: 155 Y-----SKGIKVNEIDGIFASRATHIAEIEFNNV---EVPEENILGNEGSGFTFIVSTAL 206

Query: 319 DSAIMSVSGMRVSLA-EAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D    SV+   V LA EA+     YA+ R      + +  +++  I D    + AA AL 
Sbjct: 207 DHGRYSVAWGGVGLAQEALEVMTSYAKNRVQFDTAIHNHQLVQGMIGDSVTSLHAARALC 266

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +      E + +++  A         KY+  K+A  +  +A++ +G +G +      R 
Sbjct: 267 LKAG----EMRKKNDIDAINE--TNFAKYFSSKVAMKIATDAVQVLGANGCLNTYPTERL 320

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           +RE            A VL+++    +GT+  +QLF+
Sbjct: 321 FRE------------AKVLEII----EGTSQLQQLFA 341


>gi|114797804|ref|YP_761489.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114737978|gb|ABI76103.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 386

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 19/245 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFL 257
             LTE   G+D A + ++  +  D  Y L+G K ++++   +D F ++A+  +   G   
Sbjct: 122 FALTEPEAGSDAAGLKTKAVRDGDH-YILNGTKRYITNANKADLFTVMARTNQDEPGAKG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V   + +    GL   + + K+G +     ++ F N     +   N+     E  K+ + 
Sbjct: 181 VSAFIVERDTPGLSVGKPEKKMGQQGAHICDVIFENA---RVPAANMIAKEGEGFKVAMS 237

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD   + +S +   ++     E ++Y+  R   G  + +  +++  IAD   +  AA  
Sbjct: 238 VLDKGRLHISAVATGVSKRLIREMVNYSLERKQFGKPIFEHQMLQALIADSQAETYAAEC 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +         +A  R +      ++A  TK +  +    V   A++  GG+GY+ +  I 
Sbjct: 298 MIM-------DAARRRDAGEDITMLASCTKLFATEACGRVADRAVQIFGGAGYVSDYGIE 350

Query: 432 RHYRE 436
           R YR+
Sbjct: 351 RFYRD 355


>gi|161950109|ref|YP_403388.2| putative acyl-CoA dehydrogenase [Shigella dysenteriae Sd197]
          Length = 383

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPDAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D  +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADLHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|218778672|ref|YP_002429990.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760056|gb|ACL02522.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 359

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 12/139 (8%)

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+Y+ SA  ++   R +  +A+ YAR R+  G ++I    ++R +  + +++ AA A   
Sbjct: 229 LLYVLSAAAALGAARTAYDKALAYARERYQYGKVIIQHQEIRRMLGAMRMNLDAARAF-- 286

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L   FDE            + A   K +C   A  V+ +A++  GG GY+ E+ + +  
Sbjct: 287 -LYAYFDEKSG---------VHAAHVKAFCTDAAFNVVVDAIQIHGGYGYMHEQGLEKLM 336

Query: 435 RESPANSILLGSGNAMVLD 453
           R+     +L GS   +++D
Sbjct: 337 RDVKVLQVLGGSNPQLLVD 355


>gi|111219905|ref|YP_710699.1| acyl coenzyme A dehydrogenase [Frankia alni ACN14a]
 gi|111147437|emb|CAJ59087.1| acyl coenzyme A dehydrogenase (partial) [Frankia alni ACN14a]
          Length = 406

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 31/327 (9%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           ++  A  +  ++++ AG   S SV +   A  VA +TT    K W P   S E       
Sbjct: 92  YRFNAVWVEELSKVSAGVASSFSVHTDIVAPYVAGLTTQDQQKRWLPAFCSGE------- 144

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
                 +   +G+TE   G+D+AA+ +    + DG  + ++G K F+++  S  F++LA 
Sbjct: 145 ------MVAAIGMTEPAAGSDLAALRTTA--VPDGSDWIINGSKTFITNGYSADFVVLAA 196

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
               G      +          G    R  +K+G   + T EL F++       ++G+++
Sbjct: 197 RTDPGAKAARGITLFGVTADTPGFSRGRKLHKVGQPESDTAELFFTDMRVPADAVIGEVD 256

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +      +  A+ S++     L E + Y   R   G  +      K  +A++ 
Sbjct: 257 RGFPRMMERLPQERISVAVSSIAHATQILGETLAYVAERKAFGAAIGSFQHNKFLLAELV 316

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I    A      +S   A SR   +A   + A   K+W  ++  AV+   ++  GG G
Sbjct: 317 TKIDVTQAF----VDSCVAAHSRGNLSA---VDAAKAKWWSSEVQNAVLDACVQLHGGYG 369

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E   A+ + +     I  G+   M
Sbjct: 370 YMTEYRAAQAWMDGRVTKIWAGTNEIM 396


>gi|222423405|dbj|BAH19674.1| AT3G45300 [Arabidopsis thaliana]
          Length = 256

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  + +K+ DG Y L+G+K W  + P ++  ++ A+ + + G   +
Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              + +    G    +  +K+G R + T EL F N F
Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF 246


>gi|159040257|ref|YP_001539510.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157919092|gb|ABW00520.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 394

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 131/328 (39%), Gaps = 44/328 (13%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGG 208
           HL++ S  +       TTP    D    +  R   PT    M      IG L +TE  GG
Sbjct: 98  HLVTASDRATGDAGTGTTPAAGTD----LVERYVRPTLAGTM------IGALAITEPGGG 147

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  ++  D  Y ++G K +++S     F+ +A   G  G   +  L+ +   +
Sbjct: 148 SDVAGLRTTARRDGD-HYVVNGAKAYITSGYRADFVTVAVRTGGPGADGISLLVIEKGMS 206

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G    R   K+G   + T EL F+        D+ V        +   +L S + + +  
Sbjct: 207 GFTVGRRMEKLGWHCSDTAELSFA--------DVRVPVANRVGEENTGFL-SIMQNFAAE 257

Query: 329 RVSLA-EAIHYARR-----------RHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           RVSLA +A   A+R           R   G  L  + +++  +A++     +  A    +
Sbjct: 258 RVSLATQAYATAQRCVELARGWCQDRETFGRPLTSRQLVRHRLAEMHTRAESVRAYVLDV 317

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A      +    E A A       K         V+  A++  GG G + +  + RHYR+
Sbjct: 318 ATRVAAGEPAMTEIAMA-------KNAAVDACAEVVDTALQLHGGFGCMRDAEVERHYRD 370

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNL 464
               SI  G G   +++   ++ KG  L
Sbjct: 371 QRILSI--GGGTTEIMN--EIIAKGMGL 394


>gi|254821120|ref|ZP_05226121.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 401

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+ +      D  Y ++G K F+++      I+    L + +GR  +
Sbjct: 131 MAITEPGFGSDSAAVATTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSQGRAAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL++K+G + + T  + F N       LLG+  +  G   
Sbjct: 190 KSFVVPR-----EHPGVTVERLEHKLGIKGSDTAAIRFDNVRIPKENLLGNPEIEVGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQP--VMKRAIAD---I 362
              ++   D+    V+ M V +  A +   R+     G+ I  D+P  V   A A+   +
Sbjct: 245 S-GVMETFDNTRPIVAAMAVGVGRAALEEIRKILTEAGVEISYDRPAHVQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+       ++K    +M   V  +++E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNKIPNSKEAS-------MSKAKAGRMVTDVTLKSVELAGTA 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQTLLEKWARDSKILDIFEGT 380


>gi|257466369|ref|ZP_05630680.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917525|ref|ZP_07913765.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691400|gb|EFS28235.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 378

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 34/270 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI----MLAQVEGRVGCFL 257
           LTE   G+D +A  +   K  D  Y L+G K F+++    +F     M  + +G  G  +
Sbjct: 123 LTEPGAGSDASAGKTTAVKDGDS-YILNGRKCFITNGAVASFYCITAMTDKTKGVKGISM 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
              L+E G+P GL     +NK+G R+        SNT   +L D  +    +     E  
Sbjct: 182 F--LVEAGTP-GLSTGNHENKMGIRT--------SNTCDVVLEDCRIPASALVGKEGEGF 230

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I +  LD A   +  +   +A     EAI Y + R   G  +I    ++  IAD+ +  
Sbjct: 231 AIAMKTLDQARTWMGCIATGIAQRGINEAIAYGKERIQFGKPVIKNQALQFKIADMEIKT 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +        D     ++E+A       I K +   +A  V +EA++  GG GY  
Sbjct: 291 ETARQMVAHALTKMDLGLPFAKESA-------IAKCYAGDIAMEVASEAIQVFGGYGYSR 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E  + +  R++    I  G+     + + N
Sbjct: 344 EYPVEKLIRDAKIFQIFEGTNEIQRIVIAN 373


>gi|158315746|ref|YP_001508254.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111151|gb|ABW13348.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 426

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 26/269 (9%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEG 251
           +T  AI L       G+D + + +  +++ DG + + G K F++     AF I +A+ EG
Sbjct: 151 ETRSAIALTEPAPGAGSDPSMVRTTARQV-DGGWVIDGAKHFITGAEGAAFTICIARTEG 209

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----- 303
               FLV    +  +P     +R+     +      E+ F++ F     +LGD+      
Sbjct: 210 GTTMFLV----DQDNPGLAVGRRMPTLDHSAPGGHCEVTFADCFVPDEAVLGDVGAGLRY 265

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             V   P      + +L  A  +  GM      A  + +RR   G  + +  + +  +AD
Sbjct: 266 AQVRLAPARLAFCMSWLGIAARA-HGM------AAEWIQRRSSFGRPISEHGMAQAHVAD 318

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             +DIAAA AL   +A   DE    S   + AR  A I K +  +    V+   ++  GG
Sbjct: 319 NEIDIAAARALVRSVARVLDEQGVAS---SAARHGAAIAKTFVAEAVWRVLDRVVQLYGG 375

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            G  E+  +AR   E+    I  GS   +
Sbjct: 376 LGICEDHLVARFLVEARGFRIYEGSSEVL 404


>gi|226362138|ref|YP_002779916.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240623|dbj|BAH50971.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 396

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 39/306 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A M+A   TP     + P++ + E                   ++E   G+D+AAI ++ 
Sbjct: 99  AHMIAHHGTPEQKAHYLPRMATGELRGA-------------FSMSEPGLGSDVAAIRTKA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF--IMLAQVEG------RVGCFLVPRLLEDGSP-NG 269
            + +DG Y + G K +L++  S     +++   EG       +  FL+ +    G    G
Sbjct: 146 TRAADGDYVIDGQKMWLTNGGSSTLVAVLVRTEEGAPKAHDNLTAFLIEKPAGFGEVLPG 205

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
           L       K+G +   T E+ F         D  +   P    + ++  ++   ++V+  
Sbjct: 206 LTIPGKIEKMGYKGIDTTEMVFDGYRA--AADTILGGAPGRGFRQMMDGVEVGRVNVAAR 263

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              +A+      + YA+ R   G  + +   +   IA++A  + AA  +    A   D  
Sbjct: 264 ACGIAQRAFELGVKYAKARETFGSPIAEHQAIAFRIAEMATKVEAAHLMMVNAARLKDSG 323

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +          + A + KY   +    V  ++    GG GY +E  I R  RE+P   +L
Sbjct: 324 ERND-------VAAGMAKYLASEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAP--FLL 374

Query: 444 LGSGNA 449
           +G G +
Sbjct: 375 IGEGTS 380


>gi|313675783|ref|YP_004053779.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942481|gb|ADR21671.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 600

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 118/289 (40%), Gaps = 46/289 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  A  ++     D   Y ++G K W  +   +D FI+ A+++    +  F+
Sbjct: 153 LTEPDSGSDANAAKTKAVLTEDKKHYIVNGQKMWITNGGFADVFIVFAKIDDDKNLSAFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303
           V +        G+     + K+G + ++T ++ F+              N F   +  LN
Sbjct: 213 VEKDF-----GGVTMNEEEAKMGIKGSSTRQVFFNDCKVPVENLLSERENGFKIAVNILN 267

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +           I L ++ +  S  +  L +A  YA  R   G  +     ++  IA++A
Sbjct: 268 IGR---------IKLGASAIGAS--KAVLGQAAQYANERKQFGTSIGSFGAIQHKIAEMA 316

Query: 364 LDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
               AA + ++R            +A   +EA+++ +      I   I K    ++   V
Sbjct: 317 ARTYAAESAAYRAGQNIDDAYEDLVAGGMEEAEAKLKSVEEFAIECAIIKVHASEVLDYV 376

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             E ++  GG G+  +  + R YR++  N I  G+     +  +++L K
Sbjct: 377 ADEGVQVYGGMGFSADAPMDRAYRDARINRIFEGTNEINRMLTIDMLLK 425


>gi|294632990|ref|ZP_06711549.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830771|gb|EFF89121.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 34/264 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + LTE  GG+D+ A+ +  +K  D  Y ++G K ++++      I L        C   P
Sbjct: 121 MALTEPGGGSDLQAMRTVARKDGD-EYVVNGSKTWITNSRRAGLIALM-------CKTDP 172

Query: 260 R----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
                      LL +  P GL   R   K+G +   + EL F +       +LG +    
Sbjct: 173 TASPAHKGISILLAEHGP-GLTVSRDLPKLGYKGVESCELAFDDYRVPADAVLGGVE-GK 230

Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + MK L    L  A  ++   R +L +++ YA+ R   G  +     +   +AD+A 
Sbjct: 231 GFGQMMKGLETGRLQVAARALGVGRAALEDSLAYAQERESFGKPIWQHQSIGHYLADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L+   A   +  +    EA  A++ A  T          +   A+   GG GY
Sbjct: 291 SLTAARQLTLYAAREAEAGRRVDMEAGMAKLFASETGM-------QIALNAVRIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGN 448
             E  + R++R++P   +++G G 
Sbjct: 344 STEFDVERYFRDAPL--MIVGEGT 365


>gi|316934709|ref|YP_004109691.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602423|gb|ADU44958.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 384

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 28/264 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----G 254
           +G++E   G+D+A I +  +   D      G  W  +   +D   +L    EG V     
Sbjct: 123 IGVSEPGAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNTGEGPVHRNKS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTG 307
              VP         G+   R  +K+G RS+ T ++ F        N  G     L  +  
Sbjct: 183 LICVPM-----KTKGVTIARKLDKLGMRSSDTAQIYFDEVRVPKRNRIGEE--GLGFTYQ 235

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            V+  +  ++  +A +       ++   I Y R R   G  L+D  V+   +A++  ++ 
Sbjct: 236 MVQFQEERLWGAAACLKAH--EKTIQNTIDYTRGRKAFGKPLLDNQVIHFRLAELQTEVE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              +L +R A +    +  +  A  A++ A        ++   +    ++  GG G++ E
Sbjct: 294 LLRSLVYRAAEALVAGEDVTGLATMAKLKAG-------RLGREIPDACLQFWGGMGFMNE 346

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             ++R YR+S   +I  G+   M+
Sbjct: 347 TLVSRSYRDSRLTAIGGGADEVML 370


>gi|110804106|ref|YP_687626.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 5 str. 8401]
 gi|123048484|sp|Q0T8F5|CAIA_SHIF8 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|110613654|gb|ABF02321.1| probable carnitine operon oxidoreductase [Shigella flexneri 5 str.
           8401]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNSVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|242025662|ref|XP_002433243.1| Very-long-chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212518784|gb|EEB20505.1| Very-long-chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 598

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 49/313 (15%)

Query: 162 VALMTTPRVHKDWAPKIFS-REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           + L  TP   K + P++ + +EY                  LTE   G+D A+I S+   
Sbjct: 135 ILLFGTPEQKKKYLPRVSTGKEY--------------AAFCLTEPTAGSDAASIKSRAVL 180

Query: 221 ISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----------VGCFLVPRLLEDGSPN 268
             DG  + L+G K W  +   ++   + AQ   +          V  F+V R     S  
Sbjct: 181 SPDGSHWILNGSKIWISNGGFAEIMTVFAQTTVKNEETGVEKDAVTAFIVER-----SFG 235

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSA 321
           G+     + K+G +++ T E+ + N       +LG   V  G    M+IL      + SA
Sbjct: 236 GVTSGPPEKKMGIKASNTTEVFYDNVKIPKENVLG--GVGNGFKVAMQILNNGRFGMASA 293

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +     MR + A+A+ +A +R   G  +     ++  +A +A+      +L++ ++ + D
Sbjct: 294 LAGT--MRSATAKAVEFATQRLQFGQKIEKYATIQEKLAKMAMLQYVTESLAYMISGNMD 351

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  +  +      + A I+K +  + A  V  EA++ +GG G++    + +  R+     
Sbjct: 352 QGSTDYQ------VEAAISKCFASESAWTVTDEAIQIMGGMGFMRHSGLEKVLRDLRIFR 405

Query: 442 ILLGSGNAMVLDV 454
           I  G+ + + L V
Sbjct: 406 IFEGTNDILRLFV 418


>gi|163856246|ref|YP_001630544.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259974|emb|CAP42275.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 398

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 43/274 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-- 255
             L+EK  G+D+AA+TS  ++  DG  Y ++G K W  +  ++D + +  + E   G   
Sbjct: 138 FALSEKNAGSDVAAMTSSARR--DGEHYVINGEKTWISNGGIADVYTLFVRSEAAPGTRG 195

Query: 256 ------------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                       F +   ++  +P+ L   R  +    R  AT  L  S   GF L    
Sbjct: 196 ISAFLVYPDDPGFSIAERIDVMAPHPLATLRFTDM---RIPATRMLG-SPGSGFKLA--- 248

Query: 304 VSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                   M+ L I+  S   +  G  R +  EA+ +AR R + G  L D  + +  + +
Sbjct: 249 --------MRTLDIFRVSVAAAALGFARRAFDEAVAHARSRQMFGATLADLQITQSRLGE 300

Query: 362 IALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +A  I A+  L++R A   D  +   + EAA A++ A        + A AVI  A++  G
Sbjct: 301 MAAAIDASALLTYRAAWQRDVRQLPTTREAAMAKLSA-------TENAQAVIDAALQMFG 353

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G G      +   YRE  A  I  G+     L V
Sbjct: 354 GRGVRSGAIMESLYREIRALRIYEGASEVQKLIV 387


>gi|254230755|ref|ZP_04924082.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
 gi|124599814|gb|EAY58824.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
          Length = 396

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D AA+ ++ ++         G  W  +  ++D  I+ A  +  +  F+VP
Sbjct: 141 FGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVP 200

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    G     + +K+  R++ T EL   N        L  +TG    +  L    
Sbjct: 201 T-----DTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGLRAPLACLSEAR 255

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I+  ++   R +   A+ YAR+R   G  +    + +  + D+A+++     LS  L 
Sbjct: 256 YGIVWGAMGAARSAWPCALDYARQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLG 315

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D    R ++ ++ ++         C+ A  +       +GG+G   E  + RH
Sbjct: 316 RLKDRVGLRPDQVSFGKLNNTREALKICRTARTI-------LGGNGISLEYPVIRH 364


>gi|39934682|ref|NP_946958.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192290199|ref|YP_001990804.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648532|emb|CAE27053.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192283948|gb|ACF00329.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 390

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 67/292 (22%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W PKI S E        +Q        G+TE   GTD  ++ +  +K ++G Y ++G K 
Sbjct: 110 WLPKIASGELR------LQ------AFGVTEPTSGTDTTSLKTFAKKDANGDYVVNGQKI 157

Query: 233 WFLSSPMSDAFIMLA----------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W   +  SD  I+LA          + EG +  FLV   + +   +GL  + ++  +   
Sbjct: 158 WTSRAEYSDLMILLARTTPKDQVTKKTEG-LSVFLVD--MREARGHGLEIRPIRTMM--- 211

Query: 283 SNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           ++AT E+ F++               F ++L  +N         +ILI    A   V   
Sbjct: 212 NHATTEVFFTDMKVPKENLIGEEGKGFRYILSGMNAE-------RILI----ASECVGDA 260

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  +A+A  YA+ R V G  +     ++  IA    ++ AA  +       ++       
Sbjct: 261 KWFIAKASAYAKDRAVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEATRKYEAGMDCGA 320

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           EA  A+++A          A A    A  CI   GG G+ EE  + R +RE+
Sbjct: 321 EANMAKMLA----------ADASFEAANACIQTHGGFGFAEEYDVERKFRET 362


>gi|15610410|ref|NP_217791.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis H37Rv]
 gi|15842864|ref|NP_337901.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31794454|ref|NP_856947.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium bovis AF2122/97]
 gi|121639163|ref|YP_979387.1| putative acyl-CoA dehydrogenase fadE25 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663137|ref|YP_001284660.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis H37Ra]
 gi|148824476|ref|YP_001289230.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis F11]
 gi|167968905|ref|ZP_02551182.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis H37Ra]
 gi|215405287|ref|ZP_03417468.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|215413152|ref|ZP_03421853.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428758|ref|ZP_03426677.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|215432239|ref|ZP_03430158.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|215447579|ref|ZP_03434331.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T85]
 gi|219559334|ref|ZP_03538410.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|224991656|ref|YP_002646345.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800317|ref|YP_003033318.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 1435]
 gi|254233884|ref|ZP_04927209.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis C]
 gi|254365897|ref|ZP_04981942.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552376|ref|ZP_05142823.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188323|ref|ZP_05765797.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|260202436|ref|ZP_05769927.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T46]
 gi|260206626|ref|ZP_05774117.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis K85]
 gi|289444856|ref|ZP_06434600.1| acyl-CoA dehydrogenase fade25 [Mycobacterium tuberculosis T46]
 gi|289448963|ref|ZP_06438707.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|289555552|ref|ZP_06444762.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 605]
 gi|289571501|ref|ZP_06451728.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|289575994|ref|ZP_06456221.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis K85]
 gi|289747092|ref|ZP_06506470.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|289751969|ref|ZP_06511347.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|289755397|ref|ZP_06514775.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|289759415|ref|ZP_06518793.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis T85]
 gi|294993785|ref|ZP_06799476.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis 210]
 gi|297635928|ref|ZP_06953708.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN 4207]
 gi|297732925|ref|ZP_06962043.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN R506]
 gi|298526750|ref|ZP_07014159.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777603|ref|ZP_07415940.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu001]
 gi|306782325|ref|ZP_07420662.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu002]
 gi|306786147|ref|ZP_07424469.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu003]
 gi|306790515|ref|ZP_07428837.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu004]
 gi|306795036|ref|ZP_07433338.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu005]
 gi|306799234|ref|ZP_07437536.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu006]
 gi|306805082|ref|ZP_07441750.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu008]
 gi|306809269|ref|ZP_07445937.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu007]
 gi|306969371|ref|ZP_07482032.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu009]
 gi|306973723|ref|ZP_07486384.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu010]
 gi|307081432|ref|ZP_07490602.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu011]
 gi|307086036|ref|ZP_07495149.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu012]
 gi|313660257|ref|ZP_07817137.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54036658|sp|P63428|ACDP_MYCBO RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|54040670|sp|P63427|ACDP_MYCTU RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|1877329|emb|CAB07077.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE25 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883195|gb|AAK47715.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31620050|emb|CAD95394.1| PROBABLE ACYL-COA DEHYDROGENASE FADE25 [Mycobacterium bovis
           AF2122/97]
 gi|121494811|emb|CAL73292.1| Probable acyl-CoA dehydrogenase fadE25 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599413|gb|EAY58517.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis C]
 gi|134151410|gb|EBA43455.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507289|gb|ABQ75098.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis H37Ra]
 gi|148723003|gb|ABR07628.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis F11]
 gi|224774771|dbj|BAH27577.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321820|gb|ACT26423.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 1435]
 gi|289417775|gb|EFD15015.1| acyl-CoA dehydrogenase fade25 [Mycobacterium tuberculosis T46]
 gi|289421921|gb|EFD19122.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|289440184|gb|EFD22677.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 605]
 gi|289540425|gb|EFD45003.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis K85]
 gi|289545255|gb|EFD48903.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|289687620|gb|EFD55108.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|289692556|gb|EFD59985.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|289695984|gb|EFD63413.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|289714979|gb|EFD78991.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis T85]
 gi|298496544|gb|EFI31838.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214144|gb|EFO73543.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu001]
 gi|308325075|gb|EFP13926.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu002]
 gi|308329296|gb|EFP18147.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu003]
 gi|308333127|gb|EFP21978.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu004]
 gi|308336814|gb|EFP25665.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu005]
 gi|308340648|gb|EFP29499.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu006]
 gi|308344381|gb|EFP33232.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu007]
 gi|308348385|gb|EFP37236.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu008]
 gi|308353222|gb|EFP42073.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu009]
 gi|308356962|gb|EFP45813.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu010]
 gi|308360963|gb|EFP49814.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu011]
 gi|308364503|gb|EFP53354.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu012]
 gi|323718143|gb|EGB27325.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CDC1551A]
 gi|326902498|gb|EGE49431.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis W-148]
 gi|328460051|gb|AEB05474.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 4207]
          Length = 389

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRAKADGDH-WILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHKDDEGFTVGPKERKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYS 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AA-----ARAERGEPDLGFISAA-SKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|320165123|gb|EFW42022.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 401

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 44/271 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           +G++E   G+D+  I +   +  D  Y ++G K F+S+  M+D  +++A+ +   G  G 
Sbjct: 147 IGMSEPSAGSDLQGIKTTAVRDGDD-YVINGSKIFISNGQMADIIVLVAKTDPSKGAHGT 205

Query: 256 FLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT--------------FGFLL 299
            L+  L+E   P    +QR +N  K+G ++  T EL F N               F +L+
Sbjct: 206 SLI--LVETDRPG---FQRGRNLKKLGLKAQDTSELFFDNVRVPASNLLGKENHGFKYLM 260

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            +L          +++I     ++S +      A+ + Y   R   G  +      K  +
Sbjct: 261 QELGTE-------RLVI----GVLSQASAEGVFADTVKYVNERQAFGKSIASFQNTKFKL 309

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   ++             D       +     + A I K     M   +  E ++  
Sbjct: 310 AEMKTQLSVGRVF-------IDRCLELQNQGKLDPVAAAIAKLHAGDMLAKITDECLQLH 362

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG G++ E + AR Y ++    I  G+   M
Sbjct: 363 GGYGFMWEYTAARAYADARVQRIYGGTSEIM 393


>gi|41409975|ref|NP_962811.1| FadE20_3 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398808|gb|AAS06427.1| FadE20_3 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 62/308 (20%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TTP   + W P + + E               +G+ +TE   G+D+A I +   +  D 
Sbjct: 105 LTTPEQQRRWLPGVVTGE-------------TVLGIAMTEPGTGSDLAGIRTTAVRDGDH 151

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  + D F++  +   +   G  L   L+ D    G    R   KIG 
Sbjct: 152 -YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKGLSL---LVVDADTPGFGRGRNLEKIGL 207

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSL 332
            +  T EL F+        D+ V   P E++         +++  L    +S++   V+ 
Sbjct: 208 HAQDTSELSFT--------DMRV---PAENLLEAEGRGFYQLMKNLPQERLSLAVGAVAA 256

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDE 382
           A     E + Y ++ H  G  +      +  +A++A +I  A       L+  LA     
Sbjct: 257 AEAVFAETLDYVKQWHAFGAPIAAFQNSQFVLAELATEIDVARTYLDDCLAAHLAGELTA 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A++       AR+     K+W   +        ++  GG GY+ E  +AR + ++   +I
Sbjct: 317 ARA-------ARL-----KWWTTDLQVRTADRCLQLHGGYGYMREYGVARAFVDARIQTI 364

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 365 YGGTNEIM 372


>gi|110640252|ref|YP_667980.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 536]
 gi|191174108|ref|ZP_03035622.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli F11]
 gi|300984179|ref|ZP_07176907.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 200-1]
 gi|123049524|sp|Q0TLV0|CAIA_ECOL5 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|110341844|gb|ABG68081.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 536]
 gi|190905602|gb|EDV65227.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli F11]
 gi|300306709|gb|EFJ61229.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 200-1]
 gi|324012294|gb|EGB81513.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 60-1]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|323959988|gb|EGB55634.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|302418038|ref|XP_003006850.1| acyl-CoA dehydrogenase fadE12 [Verticillium albo-atrum VaMs.102]
 gi|261354452|gb|EEY16880.1| acyl-CoA dehydrogenase fadE12 [Verticillium albo-atrum VaMs.102]
          Length = 438

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 45/261 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D  ++T+   ++ DG Y +SG K W   + ++   I+LA    R G    
Sbjct: 170 FGVTEPNAGLDTKSLTTTANRLDDGSYSVSGQKIWITCAQVASKMILLA----RTG---- 221

Query: 259 PRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEF--------------SNTFGFL 298
           P+ L       D    GL  +R+K K+G R+    E+ F               N F  +
Sbjct: 222 PQALSLFSIDIDREAKGLDMRRIK-KMGGRAVDANEVFFDNYQIPADALIGEEGNGFKMI 280

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  +N         + L+  ++  +  +    +L  A  YAR R V G  +     +   
Sbjct: 281 LHGMNAE-------RCLLAGEALGLGYA----ALTRAATYARERVVFGRPIGMNQGVAHP 329

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEA 415
           +AD  + + AA   ++  A  +D A S+++ +  A    I A   KY   + A A    A
Sbjct: 330 LADAYMQLEAAKLATYHAARLYD-ASSKTDSSIQAHELGIAANSAKYLAAEAAFAACERA 388

Query: 416 MECIGGSGYIEERSIARHYRE 436
           +   GG GY  E  + R  RE
Sbjct: 389 VLAHGGMGYAMEYDVERWLRE 409


>gi|194375079|dbj|BAG62652.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 25/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 74  VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKA 132

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVSTGPV 309
               ++E  +P G+   R +  +G R + T  + F +        L+GD     V+ G  
Sbjct: 133 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAF 191

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  + ++    A  +V   + +L EA  YA  R   G +L++   +   +A++A+ +  A
Sbjct: 192 DKTRPVV----AAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELA 247

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                R A   D  +  +         A I K +   +A  +  +A++ +GG+G+  E  
Sbjct: 248 RMSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP 300

Query: 430 IARHYRESPANSILL 444
           + +  R++    + L
Sbjct: 301 VEKLMRDAKIYQVRL 315


>gi|54024207|ref|YP_118449.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015715|dbj|BAD57085.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 399

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 50/280 (17%)

Query: 184 DPTNKA----PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           DP  KA    P+ +  +     +TE     G+D AA+T++  K++ G + ++GHK F++ 
Sbjct: 112 DPDQKAQYLEPLARGDLRSAFAMTEPAPGAGSDPAALTTRADKVAGG-WRINGHKHFITG 170

Query: 237 SPMSDAFIMLAQVEGRVGC------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV--- 287
           +  +  FI++A+  G  G       FL P         GL   R+   I     A +   
Sbjct: 171 ADGAGFFIVMARTSGEPGVRGGATMFLAP-----ADTPGL---RVGRHITTLDRAMIGGH 222

Query: 288 -ELEFSNTF---GFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            E+ F + F     +LG ++       V  GP     ++ +L +A       R     A+
Sbjct: 223 CEVFFEDVFVPDAAVLGAVDRGFEYAQVRLGPARMTHVMRWLGAA-------RRGHDIAV 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +   R   G  + D  + ++ IAD  +DIAA  AL  R     D    R E A  A   
Sbjct: 276 AHVAERAGFGSRIGDLGMAQKMIADNEIDIAATRALLVRACWELD----RGEHAGNA--- 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             I K +  +    ++  A++  GG G  ++  +AR  RE
Sbjct: 329 TSIAKTYAAEAIFRIVDRAIQLCGGLGVSDDLPLARLSRE 368


>gi|24216062|ref|NP_713543.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656692|ref|YP_000778.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|6683573|dbj|BAA89258.1| OrfH [Leptospira interrogans serovar icterohaemorrhagiae]
 gi|24197296|gb|AAN50561.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599928|gb|AAS69415.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 391

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 21/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
           P+ +  +     +TE     G D   +T+   K  D  Y ++GHKWF +    +D  I++
Sbjct: 119 PLVQGKIRSAFAMTEPPPGAGADPQTLTTNAVKQGDE-YVINGHKWFCTGANGADFLIVM 177

Query: 247 AQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           ++V     R   FLVP      +P     + +     +      EL+F N   +   +LG
Sbjct: 178 SKVSDSFRRTTLFLVP----TNTPGYTMVREIGVMGSHGPGGHCELKFENVRVSESSILG 233

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            +       ++      L   +  +   R S+  A  YA +R V G  + D   ++   A
Sbjct: 234 KVGEGFKWSQERLGPARLTHCMRWIGLARRSMEVAREYALKREVFGQRIADHQGIQWMFA 293

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + A++I +   L+ + A++    +        AR +  + K+   +    VI  A++  G
Sbjct: 294 ESAVEIESGYMLTLKAAHTLRAGED-------ARQIISMAKWQVSETLCKVIDRAIQICG 346

Query: 421 GSGYIEERSIARHYRESPANSILLG 445
             GY  +  +   YR++ A  I  G
Sbjct: 347 SHGYGRDMKLELFYRDARAARIADG 371


>gi|307323559|ref|ZP_07602769.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306891048|gb|EFN22024.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 375

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 34/276 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ +S+ + ++A
Sbjct: 101 APLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FYVLNGVKRWITNAGVSEYYTVMA 159

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
             +       +  F+V    E G P G+ +   + K+G + + T E+   N       ++
Sbjct: 160 VTDPEKRSKGISAFVV----EKGDP-GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMI 214

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           G+    TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   
Sbjct: 215 GEEG--TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQG 269

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPA 410
           ++  +AD+A+ + AA  L++  A     AKS    A   +          K +    A  
Sbjct: 270 VQFMLADMAMKLEAARQLTYAAA-----AKSERVFAGGGKEDLTFFGAAAKCYASDAAME 324

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 325 ITTDAVQLLGGYGYTRDYPLERMMRDAKITQIYEGT 360


>gi|260432763|ref|ZP_05786734.1| isobutyryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416591|gb|EEX09850.1| isobutyryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 563

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T      W PKI S E  PT                TE   G
Sbjct: 258 GSLGTRSEIAAELILAGGTEDQKAQWLPKIASAEILPTAV-------------FTEPNTG 304

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  +G Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 305 SDLGSLRTRAVKDENGDYKITGNKTWITHAARTHVMTLLARTDPNTTDHRGLSMFLAEKT 364

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
              D +P    G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 365 PGTDDNPFPTPGMTGGEIE-VLGYRGMKEYELAFD---GFHVKGENLLGGEEGKGFKQLM 420

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     A+ YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 421 ETFESARIQTAARAIGVAQSALDIAMQYAQERKQFGKALINFPRVSGKLAMMAVEIMIAR 480

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 481 QLTYFSAWEKDNGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 533

Query: 431 AR 432
           +R
Sbjct: 534 SR 535


>gi|225559014|gb|EEH07297.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 469

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 28/303 (9%)

Query: 179 FSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E      +P + +  +   LG+TE   G+D+A I +  ++ S   Y ++G K ++++
Sbjct: 168 FGNEAQKLKYSPKVSRGEIRFCLGITEPDAGSDVANIRTTAKR-SGNKYIVNGAKKWITN 226

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEF 291
            +   +   A   G  G   +  L+   +  G+  +R++N   N S +T      VE+  
Sbjct: 227 GIWAHYCTAAVRTGGKGRGGISLLIIPLAAKGVTRRRMENSGVNASGSTFIEFDDVEVPA 286

Query: 292 SNTFG-------FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            N  G       +++ + N            + L S+ + +S  RV + +A +YA  R  
Sbjct: 287 ENLIGIENDGFRYIMSNFNPER---------LGLASSCVRLS--RVCVEDAYNYAITRET 335

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  LI   +++   + +   I    A   +LA +   A    +EA    + A + K   
Sbjct: 336 FGQPLIANQIIRAKFSKLGRLIEPCQAFLEQLAYTVQVAAKTGQEANVGGMTA-LLKVMS 394

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI-LLGSGNAMVLDVLNLLEKGTN 463
            +    V  EA + +GG+GY +    AR  + S    + ++G G+  +L  L + E+  N
Sbjct: 395 TRCLEKVCREAQQVMGGAGYNKSGRGARIEQISRDVRVYVVGGGSEEILSDLAVREEIKN 454

Query: 464 LFE 466
           L +
Sbjct: 455 LHD 457


>gi|323964862|gb|EGB60329.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
 gi|327255015|gb|EGE66618.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           STEC_7v]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|33595262|ref|NP_882905.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565339|emb|CAE36142.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 17/199 (8%)

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
           + G FLVP     G+P      +L +K+G R+  T EL F++        L G       
Sbjct: 184 KSGLFLVPY----GTPGFTVGSKL-HKMGMRAADTRELFFTDCRIPAAHILNGGAAGQAS 238

Query: 308 PVE-DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           P + D +    L  A  ++   R  L +AI +A++R   G  L ++  ++  IA++  DI
Sbjct: 239 PFKSDTQYHSKLFLASNAIGLQRYCLDQAIDFAKQRKTWGVPLSERQRIQGWIAEMVADI 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +T L  R A  ++     + ++A       I KY   + A      A E  GG GY++
Sbjct: 299 QISTLLRDRAAVLYEAGTLSAADSA-------ILKYVSAENAVKASHYASEIFGGMGYMD 351

Query: 427 ERSIARHYRESPANSILLG 445
              ++R YR++   +I+ G
Sbjct: 352 GVGVSRRYRDAKGLTIIQG 370


>gi|260425328|ref|ZP_05779308.1| isobutyryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260423268|gb|EEX16518.1| isobutyryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 562

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P + S E  PT                TE   G
Sbjct: 257 GSLGTRSEIAAELILAGGTDEQKQKWLPALASGEKLPTAV-------------FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  +  DG Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 304 SDLGSLRTRAVRGEDGDYTITGNKTWITHAARAHVMTLLARTDSATSDYKGLSMFLAEKT 363

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   ED  P  G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 364 PGTDEDPFPTPGMTGGEIE-VLGYRGMKEYELGFD---GFKVKGENLLGGEEGKGFKQLM 419

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+A     + YA  R   G  LI  P +   +A +A+++  A 
Sbjct: 420 ETFESARIQTAARAIGVAQAALDVGMRYAEERKQFGKSLIAFPRVSGKLAMMAVELMIAR 479

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   DE      EA  A+++         ++A A    A++  GG+G+  E ++
Sbjct: 480 QLTYFSAREKDEGIRCDLEAGMAKLLG-------ARVAWANADNALQIHGGNGFALEYTV 532

Query: 431 AR 432
           +R
Sbjct: 533 SR 534


>gi|302562667|ref|ZP_07315009.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302480285|gb|EFL43378.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 407

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 19/272 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS- 237
            +R Y P     +   SV   LG+TE   G+D+A++ +  +   DG Y L+G K F+++ 
Sbjct: 131 LARRYIPG----LLDGSVYGSLGITEPNAGSDVASLRTTARPAGDG-YLLNGAKTFITTG 185

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
             +   I  A V+  +G   +   + DG  +G+   R   K+G   ++T EL F +    
Sbjct: 186 DRAGVIICFATVDKSLGRRGISAFVVDGGWDGVSSGRPFEKMGMHGSSTAELFFDDVHIP 245

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G LLG+       V +  +   + +A   V   R + A  +    R H  G  L D+  
Sbjct: 246 AGHLLGEEGQGWRVVMNSVVKSRISAAAQGVGLARAAYARTLAALTRLH--GARLPDEHT 303

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
              A+A++   I     L   +A   D A     +    +I   + K  C  +      E
Sbjct: 304 F--ALAELRGRILQGRLLLHAVARQVDTAT----DIPTGQI--GMMKQACTDLGFTAAVE 355

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A   +G  G +    + R  R++    I  G+
Sbjct: 356 ATRILGPYGDLAPLGVERCLRDAKVTQIYDGT 387


>gi|323962079|gb|EGB57675.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
          Length = 383

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     Q +     F +  +  D S  G+    L +KIG    +T       VE+E S+ 
Sbjct: 167 VLARDPQPKDPKKAFTLWWV--DSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTAMEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E   +R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARASRFWRDVRCERIGGGTDEIMI 369


>gi|322816584|gb|EFZ24842.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 432

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 25/253 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++T++ +K++ G Y LSG K W  S+P++D  ++ A
Sbjct: 165 PKLATGELIGCFGLTEPNAGSDPMSMTTRARKVAGG-YSLSGCKTWITSAPLADIAVVWA 223

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           ++    ++  F+V R  +     G   +R++ K+  R++ T  +   N    ++ + NV 
Sbjct: 224 KLHDTNKIAGFIVERDFK-----GFATERIEGKLSLRTSCTGMIVLDNC---IVPEENVL 275

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
              +        L SA   ++   V  AE     A  Y+  R   G  +    +++  +A
Sbjct: 276 PHAIGLKAPFNCLSSARYGIAWGVVGAAETCFNIARDYSLERKQFGKSIASMQLVQAKLA 335

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   +I  A     R       A    EE   +  +  + K    + A  +     + +G
Sbjct: 336 DAVTEITLAMQSCLR-------AGRLKEEGKLSHQVISMLKRNNTRKAIEIARAMRDILG 388

Query: 421 GSGYIEERSIARH 433
           G+G  +E  + RH
Sbjct: 389 GNGISDEYHVMRH 401


>gi|302526466|ref|ZP_07278808.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435361|gb|EFL07177.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 45/265 (16%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR- 252
           S+ +  G+TE   GTD   I++  ++  D  Y + G K W   +  S   +++A+   R 
Sbjct: 127 SLHVCFGVTEPDAGTDTTRISTFARREGDS-YVVHGRKVWITKAGQSQKMVLIARTTPRD 185

Query: 253 --------VGCFLV------------PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
                   +  F+V            P+L  +  P+   Y+ L + +    +A V  E  
Sbjct: 186 EVEKPTDGMSLFVVDIESDAVQLRAIPKLGRNAVPS---YEVLIDGLQVPESARVGEE-G 241

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
             F +LL  LN         +IL+  ++  +     R +L  A+ YA  R V G  +   
Sbjct: 242 KGFRYLLDGLNPE-------RILLAHEALGIG----RAALRRAVRYAGERQVFGRPIGQN 290

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +A+ A  + AA  ++   A  +D   S  +EA  A       K+ C        
Sbjct: 291 QGLAFPLAEAATRLDAAELMARNAAWRYDRGLSCGKEANMA-------KWLCADAGFQAA 343

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
            +A++  GG GY  E  + R++RE+
Sbjct: 344 DQAIQTHGGMGYAREYHVERYFREA 368


>gi|330501586|ref|YP_004378455.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915872|gb|AEB56703.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 403

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 29/269 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D AAI +    + DG  Y ++G K +++S   +D  ++ A ++  +G   
Sbjct: 133 MAITEPGCGSDSAAIRTTA--VQDGDHYVINGEKIYVTSGERADTVVVWASLDRSLGRAA 190

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVED 311
           +   ++E G+P G+   RL+ K+G +++ T  + FS+       LLG  +++V  G    
Sbjct: 191 IKSFVVEKGTP-GMTVTRLEKKLGIKASDTASISFSDCRVPAANLLGNAEIDVQKGFAGV 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILID--QPVMKRAIADIAL---- 364
           M+     D+    V+GM V +A  A+   R      G   D  +P++  + A+  L    
Sbjct: 250 MET---FDNTRPLVAGMAVGVARAALERTRELLSKAGCRFDYAKPLLSVSHAEATLYRLE 306

Query: 365 -DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +  AA  L+ + A   D     S+EA+ A+  A        ++A  V  + +E  G  G
Sbjct: 307 AEWEAARLLTLKAAWMADNKLPNSKEASIAKAKA-------GRVASEVTLKCVELAGALG 359

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452
           Y E+  + +  R+S    I  G+    +L
Sbjct: 360 YGEDELLEKWARDSKILDIFEGTQQIQLL 388


>gi|291485755|dbj|BAI86830.1| hypothetical protein BSNT_04865 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 594

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 141/338 (41%), Gaps = 53/338 (15%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            +        G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 EKEF-----PGVSTGPEEKKMGIKGSSTRTLILDQAEVPTEN----LLGE--IGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL       A+ ++   +  +  +  YA +R      +    + +  I  +A  + A 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSASYANQRRQFKTPIAGFSLTQEKIGTMASRLYAM 318

Query: 370 TALSFRLANSFDEAKSR--SEEAAYARIMAP----------ITKYWCCKMAPAVIAEAME 417
            +  +R    F++  S+  +E+    R +A           + K +  +    ++ E ++
Sbjct: 319 ESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465
             GG G+++E  + R YR+S  N I  G+     L V            L+L EK  +L 
Sbjct: 379 IHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKKALKGELSLFEKAQSLQ 438

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           E+L   + ++ GS       +L     + K+ K +A F
Sbjct: 439 EELMMLMPEEPGSG------VLEQEKYIVKQAKKIALF 470


>gi|121610784|ref|YP_998591.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555424|gb|ABM59573.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 21/257 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP  +   A  + ++E   G D + ++++  +  D  + L+G K W   +  +D  I++ 
Sbjct: 119 APYARGETASAIAISEPGAGGDPSMMSTRAVREGDD-WTLNGRKIWISKADKADWTIVMV 177

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LLG 300
             +      G +  F+V    + G+P G   +R    IG  S   V LE     G  LLG
Sbjct: 178 VTDKALGARGGISAFIV----DKGTP-GFKVERRIPMIGGVSTYEVVLEDCRVPGTQLLG 232

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  P++       +  A   +   + +L     YA +R   G  L ++  ++  +A
Sbjct: 233 QEGAGFAPMQARLSSRRVQMAAWCIGRAQRALDMICEYAPQRRTFGAPLAERQAIQWWVA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D A  I A   +++       +A +R +    AR    + K +  +MA  VI  AM+ +G
Sbjct: 293 DAATRIHACRLMTY-------DAAARIDAGDEARTQVSMIKVFATEMAWEVIDRAMQALG 345

Query: 421 GSGYIEERSIARHYRES 437
             G  +E  + +   E+
Sbjct: 346 AMGMTKELPLQQMANET 362


>gi|71413730|ref|XP_808993.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70873305|gb|EAN87142.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 472

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 25/253 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++T++ +K++ G Y LSG K W  S+P++D  ++ A
Sbjct: 205 PKLATGELIGCFGLTEPNAGSDPMSMTTRARKVAGG-YSLSGCKTWITSAPLADIAVVWA 263

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           ++    ++  F+V R  +     G   +R++ K+  R++ T  +   N    ++ + NV 
Sbjct: 264 KLHDTNKIAGFIVERDFK-----GFATERIEGKLSLRTSCTGMIVLDNC---IVPEENVL 315

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                       L SA   ++   V  AE     A  Y+  R   G  +    +++  +A
Sbjct: 316 PHATGLKAPFNCLSSARYGIAWGVVGAAETCFNIARDYSLERKQFGKSIASMQLVQAKLA 375

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   +I  A     R     DE K   +       +  + K    + A  +     + +G
Sbjct: 376 DAVTEITLAMQSCLRAGRLKDEGKLSHQ-------VISMLKRNNTRKAIEIARAMRDILG 428

Query: 421 GSGYIEERSIARH 433
           G+G  +E  + RH
Sbjct: 429 GNGISDEYHVMRH 441


>gi|37676706|ref|NP_937102.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
 gi|37201249|dbj|BAC97072.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
          Length = 400

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +   ++ A+   +     +
Sbjct: 141 LAMSEANSGSDVVSMQLKAKEKGDH-FVLNGSKMWITNGPDAHTVVVYAKTNPKAEAHGI 199

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R      P     Q+L +K+G R + T EL F +       +LG++N       
Sbjct: 200 TAFIVERAF----PGFHSAQKL-DKLGMRGSNTSELVFEDCLVPKENVLGEVN------H 248

Query: 311 DMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +++L+  LD   + ++G     MR  L   I Y   R   G  + +  +++  +AD+  
Sbjct: 249 GVRVLMSGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYT 308

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA +  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GY
Sbjct: 309 QMNAARSYVYTVAAACDRGEVTRKDAAGVIL-------YSAELATRMALDAIQLLGGNGY 361

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E    R  R++    I  G+
Sbjct: 362 VNEFPTGRLLRDAKLYEIGAGT 383


>gi|88856950|ref|ZP_01131601.1| butyryl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
 gi|88813826|gb|EAR23697.1| butyryl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
          Length = 387

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 42/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA-QVEGRVGCFLVP 259
           LTE   G+D+ AI ++  +  D  + L+G K F+++ P + A  ++A Q + R   F+V 
Sbjct: 135 LTEPDAGSDVRAIRTRVSRDGD-TFILNGRKTFITNGPTAGAIGVVARQSDDRFAVFVV- 192

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
               +    G   +R+  K+G RS+   EL F N    +  D +    P E   I   LD
Sbjct: 193 ----EAGDEGFECERVLEKLGCRSSQVGELVFDN----VRLDESRRLSPPEGSSIEAILD 244

Query: 320 SAIMS---VSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             I     ++   + +A A     + YA+ R   G     +P+ +    +I++  A A A
Sbjct: 245 VLIRGRVLIAAASLGVASAAFDMGLAYAKEREAFG-----RPIGR--FQEISMKFAEADA 297

Query: 372 -------LSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                  L++R A+  D   +    E A A+++A  T  W       V+ + M   GG G
Sbjct: 298 RIAAARLLTYRAAHLCDTRDAVPIRECAQAKLIASETALW-------VVDQMMRVFGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++    I R YR+     I+ G+
Sbjct: 351 FMRGSPIERLYRDVRYFQIVEGT 373


>gi|256394399|ref|YP_003115963.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360625|gb|ACU74122.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 381

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255
           + +TE   G+D+  + ++  +  D  Y ++G K F+++  +   +++       +G  G 
Sbjct: 124 IAMTEPGTGSDLQNVATKAVREGD-EYVITGAKTFITNGHTAGLVVIVAKTDTSQGAHGV 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---M 312
            L+   + D +P G    R+  K+G  S  T EL F    G  +   N+  G VE    +
Sbjct: 183 SLLVAEVGDDTP-GFQRGRVLKKVGQHSTDTAELFFD---GLRVPAENL-LGGVEGQGFV 237

Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++++ L    + V+ + +++ EA     + Y + R   G     +P+ K  + +   ++A
Sbjct: 238 QLMLQLPQERLLVAAIGMAMLEAAVDYTVAYTKEREAFG-----KPLFK--LQNTRFELA 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               ++      FD+   +          A + KYW       VI   ++  GG GY+ E
Sbjct: 291 ECATIARVARVFFDDCVVKHLAGGLDATTASMAKYWITDRQTEVIDRCVQLHGGYGYMLE 350

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             IAR + +     I  G+   M
Sbjct: 351 YPIARLFADGRVQRIYGGANEIM 373


>gi|310800741|gb|EFQ35634.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 541

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 24/268 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  + ++G K W  +    D F    +  G  G 
Sbjct: 266 ICLAITEPDAGSDVANLTCEAKLSEDGKHFIVNGEKKWITNGIWCDYFTTAVRTGGE-GM 324

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             V  LL +  P G+  +R+  + G  S+ T  + F +       LLG  N     +   
Sbjct: 325 NGVSLLLIERGP-GVTTRRMDCQ-GVWSSGTTYITFEDVKVPVENLLGKKNQGFRVIMTN 382

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +   I  +   RV   E++ YA +R   G  LI+ PV++  +A +A  I A+ A 
Sbjct: 383 FNHERIGIIIQCIRFSRVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEASYAW 442

Query: 373 SFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMECIGGSG 423
              L N   + +   +  A  ++          A +T  +C + A  +        GG G
Sbjct: 443 ---LENLIYQCEKMGDTEAMLKLGGAIASLKAQATVTFEFCAREASQIFGGLSYSRGGQG 499

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
                 + R YR+  A +I  GS   M+
Sbjct: 500 ----GKVERLYRDVRAYAIPGGSEEIML 523


>gi|302866628|ref|YP_003835265.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302569487|gb|ADL45689.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 383

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 42/270 (15%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           V   + ++E   G+D+A ++ + ++  DG + ++G K W  ++ +++  +++A+  GR G
Sbjct: 118 VVEAVAMSEPEAGSDVANLSCRAERRGDG-WVVNGQKTWCSNAHLAEHILLVARTSGRAG 176

Query: 255 ------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                  FLVP     G+P GL    +    G   N   +L F++    L  D  V  G 
Sbjct: 177 DHQGLTMFLVP----AGAP-GLTVSGIDTMGGREVN---DLYFTDC--LLPADAVV--GR 224

Query: 309 VE----------DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           V+          +M+ LI L S ++ ++  R +  + + Y + R      +    V++  
Sbjct: 225 VDHGWRQLMAGLNMERLI-LASVVLGIA--RRAFDDVVAYVKDRRQFRRPIGSFQVIRHR 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +AD+A +I  A  L +  A   D+A       E++ A++ A  T       A  V  +AM
Sbjct: 282 LADLATEIECARLLVYDTAAKVDKAPDTVLPRESSMAKLKATET-------ARRVALDAM 334

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  E  + R  R +  +++  G+
Sbjct: 335 QMMGGYGYTTEFDMERLVRSAIVSTVYGGA 364


>gi|171463700|ref|YP_001797813.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193238|gb|ACB44199.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 347

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 37/228 (16%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D   + ++ +++  G + L+G K W  +
Sbjct: 91  FGSEAQKQKYLPKLASGEWIGYFGLTEPNHGSDAGGMITRAKQVP-GSFSLTGSKMWISN 149

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL------- 289
           SP++D F++ A+ +  +   +   +LE G   GL   ++  K+  R++ T E+       
Sbjct: 150 SPIADVFVVWAKNDAGI---IRGYILEKGM-KGLSAPKISGKMSLRASITGEIVMDEVFV 205

Query: 290 ----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
               EF  T G          GP         L+SA   ++   +  AE   YA R++  
Sbjct: 206 PAENEFPKTEGL--------KGP------FTCLNSARYGIAWGALGAAEWCWYATRQYTM 251

Query: 346 -----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                G +L    ++++ +AD+  +IA       RL    DE  +  E
Sbjct: 252 DRKQFGKLLAANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGIAAPE 299


>gi|323945776|gb|EGB41823.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
          Length = 380

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|262198653|ref|YP_003269862.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262082000|gb|ACY17969.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 381

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-------G 251
           + +TE   G+D+AA+ +   +  D  Y ++G K F+S+  + D  ++ A+ +        
Sbjct: 123 VAMTEPDTGSDLAALRTTAVRDGDE-YVINGAKTFISNGILCDLVVLAAKTDPDPANAHK 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
            +  F+V     +    G    R   K+G  S  T EL F       SN  G   G    
Sbjct: 182 GISLFVV-----EADRAGFIKGRKLAKMGMASQDTAELSFEDCRVPASNRLGEEGGGFRA 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++  ++ +    AI + +     LA+ + YA  R   G  +      +  +A+ A 
Sbjct: 237 LMTMLQQERLTV----AISAQAQAEQVLADTLAYAAERKAFGRPISKFQNTQFKLAECAT 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +    A   RL       +   +E + A++       W  +MA  V+   ++  GG GY
Sbjct: 293 KVEVGRAFLDRLLGDHVAGEELVKECSMAKL-------WQTEMASEVVDTCLQFFGGYGY 345

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  +AR Y ++    I  G+   M
Sbjct: 346 MLEYPVARAYMDARVQRIYAGTSEIM 371


>gi|163737903|ref|ZP_02145319.1| Butyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
 gi|161388519|gb|EDQ12872.1| Butyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
          Length = 387

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 18/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+  +T+  ++  D  + L+G K F+S      F ++    G       P
Sbjct: 123 LAMTEPGAGSDLRGMTATARQDGDE-FILNGTKHFISHADIADFAIVFMATGEEDTPRGP 181

Query: 260 R------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
           +       ++ G+P G   +     + +R      LEF +       +LG+++       
Sbjct: 182 KKKITAFFVDKGTP-GFTIRDGYRNVSHRGYTNAVLEFDDCRLPKSSVLGEVDKGFDVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +     +L  AI YA  R   G  +     +   +AD+A ++ AA 
Sbjct: 241 TWLGATRLQVAATCLGRAERALDHAISYAAERRQFGQQIGKFQGVSFKLADMATELKAAN 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A  FD+      + + A++ A        +M   V  EA++  GG G ++E  +
Sbjct: 301 LLTWEAAWKFDQGSVTEADMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPL 353

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 354 ERIWRDARVERIWEGT 369


>gi|114762862|ref|ZP_01442294.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114544472|gb|EAU47479.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 379

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 52/277 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ +   +G Y L+G K F+S    SDA+I++A+  G  G   +  
Sbjct: 124 LTEPGSGSDAAALATRAEASGNG-YSLTGTKAFISGGGYSDAYIVMART-GEAGPRGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           L+ D    GL +  L+ K+G ++  T +++        G LLG         E+ K   Y
Sbjct: 182 LVVDDGTEGLSFGGLEAKMGWKAQPTRQVQMDGCPVPAGNLLG---------EEGKGFRY 232

Query: 318 ----LDSAIMSVSGMRVSLAEA------IHYARRRHVSGGILIDQ-PVMKRAIADIALDI 366
               LD   +++S   +  A+A       + A RR    G  IDQ   ++  +AD+ +++
Sbjct: 233 AMAGLDGGRLNISACSLGAAQAALDATLAYMAERRAF--GQSIDQFQALQFRLADMEIEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAM-----ECI- 419
            AA     + A   D               AP  TK+  C MA   + EA      +C+ 
Sbjct: 291 QAARTFLRQAAWKLDTG-------------APDATKF--CAMAKKFVTEAGSKIADQCLQ 335

Query: 420 --GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG GY+ +  I +  R+   + IL G+   M + V
Sbjct: 336 LHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRMIV 372


>gi|73539841|ref|YP_294361.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72117254|gb|AAZ59517.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 393

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +     D  + L+G K W  + P  D  ++ A+ E  +G   +
Sbjct: 129 LAMSEPNAGSDVVSMKLRADFKGD-RFVLNGTKMWITNGPDCDVLVVYAKTEPDLGARGM 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G    +  +K+G R + T EL F +     +   N+  G     K+L+  
Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDV---EVPVENILGGENSGAKVLMSG 244

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     +SG  + + +A       Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 245 LDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D   S  E     R        +  + A  +  E ++ +GG+GYI E    R
Sbjct: 305 LYTVGKNLDSLGS--EHVRQVRKDCAAVILYTAEKATWMAGETVQILGGNGYINEYPAGR 362

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 363 LWRDAKLYEIGAGT 376


>gi|78059862|ref|YP_366437.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964412|gb|ABB05793.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 242

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 18/245 (7%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           M +  +   L +TE   G+D+ A+ ++ +++ D  Y L+G K F+++  ++   +++A+ 
Sbjct: 7   MARGEIVGALAMTEPGAGSDLQALRTRAERVGDH-YVLNGTKTFITNGLLAGVLLVVAKT 65

Query: 250 E--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           +   R G   +  +  +  P G    RL +KIG +   T EL F +       +LG ++ 
Sbjct: 66  DPAKRAGGTSILIVETEDCP-GFRVGRLLDKIGLKVQDTCELFFDDVRVPTDRVLGGVD- 123

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G  + M  L Y  L   +M+ + M  +    + Y R R   G  + +    +  +A+I
Sbjct: 124 GQGFYQIMLDLPYERLIIGVMAAAAMEGAYDATLDYVRNREAFGRPVAELQNTRFKLAEI 183

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I A      R     D    R + A      A + K W  +    V+ E ++  GG 
Sbjct: 184 ATTIKATRCFIDRCVG--DLVAGRLDIAT-----ASMAKLWGSEQQNRVVDEYLQLFGGY 236

Query: 423 GYIEE 427
           G++ E
Sbjct: 237 GFMNE 241


>gi|54025014|ref|YP_119256.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54016522|dbj|BAD57892.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 421

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 39/273 (14%)

Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           AA+ +  +   DG + L G K W  +S ++   ++LA+    +  F+VP      S  G+
Sbjct: 169 AAVRTVAEPHGDG-WILHGRKRWITNSVVAGVVVVLARTGDALTTFIVPT-----STPGV 222

Query: 271 CYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
                  K+GNR   T       V L      G + G L ++      ++ L Y     +
Sbjct: 223 TIGTPDRKLGNRGQITADVLLDGVRLGPDAVLGRVGGGLRIA------LQTLTY---GRI 273

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +    V +A+A     + + + RH  GG L      +  +AD A D+ AA +L  + A 
Sbjct: 274 GIGAAGVGMAQAAFDRTVAHLKSRHAFGGSLASTQHWQFPMADYAADLEAARSLYLKAAL 333

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D  +   E EAA A++          ++A  +  +A++  GG G++  RS+       
Sbjct: 334 RLDAGERFPEPEAAMAKLRG-------TELAARIARDAVQAFGGMGFV--RSLGADDTPG 384

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           P  +I   S    + +  N ++K   L  Q+F 
Sbjct: 385 PVEAIYRDSKIGEIYEGANEIQKWV-LARQIFG 416


>gi|169620040|ref|XP_001803432.1| hypothetical protein SNOG_13221 [Phaeosphaeria nodorum SN15]
 gi|160703953|gb|EAT79548.2| hypothetical protein SNOG_13221 [Phaeosphaeria nodorum SN15]
          Length = 400

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   G D   +++  +K  DG Y ++G K W   + ++D  I+LA+ + R      
Sbjct: 125 FGVTEPNSGLDTLRLSTTARKQDDGTYSITGQKIWITCAQVADRMILLARTKAREEAEKP 184

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
              +  F +P    D S  GL  + +K K+G R     E+ F N   +   L+G      
Sbjct: 185 SKALSMFCIPI---DKSAPGLDMRMIK-KMGGRGVDANEVFFDNYKISADCLIGKEG--- 237

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-MKRAI----A 360
              +  KI+++ +++    ++G  + L  A       +     + ++P+ M + I    A
Sbjct: 238 ---DGFKIILHGMNAERCLLAGEALGLGYAALAKASAYARDRKVFERPIGMNQGIAHPLA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D  + + AA   ++  A  +D +K+ ++       + A   KY   + A      A+   
Sbjct: 295 DAYMRLEAAKLATYHAAKLYDSSKTDQTIRQDAIGVAANSAKYLAAEAAFTACERAVLAH 354

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY +E  + R +RE
Sbjct: 355 GGMGYAQEYDVERWFRE 371


>gi|302529097|ref|ZP_07281439.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302437992|gb|EFL09808.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 19/249 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D A++ ++ ++  D  + L G K W  +  ++D  ++ A
Sbjct: 130 PSMAAGEAIGCFGLTEPDAGSDPASMRTRARRDGDD-WVLDGRKMWITNGSVADVAVVWA 188

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           Q +  V  F+VP         G     +K+K+  R++ T EL           +L ++  
Sbjct: 189 QTDKGVRGFVVPT-----DTPGFSAPEIKHKLSLRASITSELVLDGVRLPADAVLPEVTG 243

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             GP+  +    +      SV   R  L  A+ YA  R   G  +    + ++ + D+ L
Sbjct: 244 LKGPLSCLNEARF-GIVWGSVGAARSCLQAAMSYAEDRTQFGKPISAFQLTQQKLVDMTL 302

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +   A  L+  L    D    R E+ +  ++         C+ A  +       +G +G 
Sbjct: 303 EYTKALLLAIHLGRRKDAGVLRPEQVSLGKLNNVREAIEICRTARTI-------LGANGI 355

Query: 425 IEERSIARH 433
             E  + RH
Sbjct: 356 SLEYPVIRH 364


>gi|330448417|ref|ZP_08312065.1| acyl-CoA dehydrogenase, N-terminal domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492608|dbj|GAA06562.1| acyl-CoA dehydrogenase, N-terminal domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 386

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 130/284 (45%), Gaps = 33/284 (11%)

Query: 177 KIFSREYDPTNKAPMQK--TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           +IF    D   +  + K  T   +G L ++E   G+D+ ++  + ++  D  + L+G+K 
Sbjct: 104 QIFRNGNDVQKQTYLPKLLTGEHVGALAMSEVNAGSDVMSMQLKAEQ-HDDHFVLNGNKM 162

Query: 233 WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           W  + P ++  ++ A+ +   +  F++    +     G    +  +K+G R + T EL F
Sbjct: 163 WITNGPEANTLVVYARTDDNAITAFIIESQFK-----GFSTAQKLDKLGMRGSNTCELVF 217

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRR 342
            N       LLG+++         K+L+  LD   + ++   + +A+A     I Y   R
Sbjct: 218 INCHVPKENLLGEIH------HGAKVLMSGLDYERVVLAAGPLGIAQACLDLVIPYIHER 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +  +++  +AD+   + AA +  + +A + D  +   ++AA   +++     
Sbjct: 272 KQFGKAIGEFELIQAKVADMYTQLNAARSYVYTVAKACDRGEVTRKDAAGVILLS----- 326

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              ++A  +  E ++ +GG+GYI +    R  R++    I  G+
Sbjct: 327 --AELATKMALETIQILGGNGYINDYPAGRLLRDAKLYEIGAGT 368


>gi|281599400|gb|ADA72384.1| Crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2002017]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|260185266|ref|ZP_05762740.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445938|ref|ZP_06435682.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
 gi|289418896|gb|EFD16097.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
          Length = 395

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D AA+ ++ ++         G  W  +  ++D  I+ A  +  +  F+VP
Sbjct: 140 FGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVP 199

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    G     + +K+  R++ T EL   N        L  +TG    +  L    
Sbjct: 200 T-----DTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGLRAPLACLSEAR 254

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I+  ++   R +   A+ YAR+R   G  +    + +  + D+A+++     LS  L 
Sbjct: 255 YGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLG 314

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D    R ++ ++ ++         C+ A  +       +GG+G   E  + RH
Sbjct: 315 RLKDRVGLRPDQVSFGKLNNTREALKICRTARTI-------LGGNGISLEYPVIRH 363


>gi|126733736|ref|ZP_01749483.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. CCS2]
 gi|126716602|gb|EBA13466.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. CCS2]
          Length = 561

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 118/301 (39%), Gaps = 41/301 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P + S E  PT                TE   G
Sbjct: 257 GSLGTRSEIAAELILCGGTEEQKQKWLPGLASAEVLPTAV-------------FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFL---VP 259
           +D+ ++ ++  K  D         W   +  +    MLA+ +        +  FL    P
Sbjct: 304 SDLGSLRTRAVKQGDDWKVTGNKTWITHATRTHVMTMLARTDPDTTDYRGLSMFLAEKTP 363

Query: 260 RLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILI 316
              E   P  G+    ++  +G R     EL F    GF + D N+  G       +++ 
Sbjct: 364 GTEEKPFPTPGMTGGEIE-VLGYRGMKEYELAFD---GFAIKDENLLGGETGKGFKQLMQ 419

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +SA +  +   V +A++     + YA+ R   G  LI  P +   +A +A++I  A  
Sbjct: 420 TFESARIQTAARAVGVAQSALDVGMQYAQDRKQFGKSLISFPRVAGKLAMMAVEIMVARQ 479

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A+  D  +    EA  A+++     + C          A++  GG+G+  E  ++
Sbjct: 480 LTYFSADEKDNDRRCDLEAGMAKLLGARVAWACAD-------NALQIHGGNGFALEYKVS 532

Query: 432 R 432
           R
Sbjct: 533 R 533


>gi|111019328|ref|YP_702300.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818858|gb|ABG94142.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 403

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 46/271 (16%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
           AP+    +     +TE     G+D +A+T++ +K+  G + ++GHK+F++ +  +  FI+
Sbjct: 121 APLAHGDMRSAFAMTEPSPGAGSDPSALTTRAEKVPGG-WKINGHKYFITGADGAGFFII 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV----ELEFSNTF 295
            A+  G  G       FL P   E     GL   R+   I     A +    E+ F + F
Sbjct: 180 FARTSGVPGDRGGATMFLTPADAE-----GL---RVGRHIDTLDRAMIGGHCEVFFEDLF 231

Query: 296 ---GFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                +LG+++       V  GP     ++ +L +A       R     A+ +  +R   
Sbjct: 232 VPDSGVLGEVDQGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVAHVAQRDGF 284

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG L D  ++++ +AD  +DIAA+ AL  R     D+    S   +       I K +  
Sbjct: 285 GGKLGDLGMVQKMVADNEIDIAASRALLTRACWELDQGGHASNSTS-------IAKTYAS 337

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +    ++  +++  GG G   +  +AR  RE
Sbjct: 338 EAIFRIVDRSIQMCGGLGVSGDLPLARLSRE 368


>gi|15607541|ref|NP_214914.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium tuberculosis H37Rv]
 gi|31791576|ref|NP_854069.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium bovis AF2122/97]
 gi|121636312|ref|YP_976535.1| putative acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660165|ref|YP_001281688.1| putative glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148821596|ref|YP_001286350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
 gi|167970786|ref|ZP_02553063.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis H37Ra]
 gi|215402150|ref|ZP_03414331.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           02_1987]
 gi|215409910|ref|ZP_03418718.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425620|ref|ZP_03423539.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T92]
 gi|215429220|ref|ZP_03427139.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           EAS054]
 gi|215444486|ref|ZP_03431238.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T85]
 gi|218752027|ref|ZP_03530823.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis GM
           1503]
 gi|219556216|ref|ZP_03535292.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T17]
 gi|224988784|ref|YP_002643471.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|254363362|ref|ZP_04979408.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549342|ref|ZP_05139789.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260199396|ref|ZP_05766887.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T46]
 gi|260203548|ref|ZP_05771039.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           K85]
 gi|289441779|ref|ZP_06431523.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
 gi|289568314|ref|ZP_06448541.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
 gi|289572985|ref|ZP_06453212.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
 gi|289744096|ref|ZP_06503474.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
 gi|289748887|ref|ZP_06508265.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
 gi|289752429|ref|ZP_06511807.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
 gi|289756468|ref|ZP_06515846.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
 gi|289760514|ref|ZP_06519892.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
 gi|294995156|ref|ZP_06800847.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis 210]
 gi|298523874|ref|ZP_07011283.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
 gi|306774494|ref|ZP_07412831.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
 gi|306779240|ref|ZP_07417577.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
 gi|306783028|ref|ZP_07421350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
 gi|306787396|ref|ZP_07425718.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
 gi|306791949|ref|ZP_07430251.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
 gi|306796136|ref|ZP_07434438.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
 gi|306801993|ref|ZP_07438661.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
 gi|306806207|ref|ZP_07442875.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
 gi|306966403|ref|ZP_07479064.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
 gi|306970598|ref|ZP_07483259.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
 gi|307078324|ref|ZP_07487494.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
 gi|307082882|ref|ZP_07491995.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
 gi|1817715|emb|CAB06591.1| ACYL-CoA DEHYDROGENASE FADE7 [Mycobacterium tuberculosis H37Rv]
 gi|31617162|emb|CAD93269.1| PROBABLE ACYL-COA DEHYDROGENASE FADE7 [Mycobacterium bovis
           AF2122/97]
 gi|121491959|emb|CAL70422.1| Probable acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134148876|gb|EBA40921.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504317|gb|ABQ72126.1| putative glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148720123|gb|ABR04748.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
 gi|224771897|dbj|BAH24703.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289414698|gb|EFD11938.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
 gi|289537416|gb|EFD41994.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
 gi|289542067|gb|EFD45716.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
 gi|289684624|gb|EFD52112.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
 gi|289689474|gb|EFD56903.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
 gi|289693016|gb|EFD60445.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
 gi|289708020|gb|EFD72036.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
 gi|289712032|gb|EFD76044.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
 gi|298493668|gb|EFI28962.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
 gi|308216846|gb|EFO76245.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
 gi|308327793|gb|EFP16644.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
 gi|308332147|gb|EFP20998.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
 gi|308335930|gb|EFP24781.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
 gi|308339535|gb|EFP28386.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
 gi|308343412|gb|EFP32263.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
 gi|308347221|gb|EFP36072.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
 gi|308351249|gb|EFP40100.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
 gi|308355803|gb|EFP44654.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
 gi|308359722|gb|EFP48573.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
 gi|308363664|gb|EFP52515.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
 gi|308367315|gb|EFP56166.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
 gi|323721207|gb|EGB30268.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CDC1551A]
 gi|326902226|gb|EGE49159.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis W-148]
          Length = 395

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D AA+ ++ ++         G  W  +  ++D  I+ A  +  +  F+VP
Sbjct: 140 FGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVP 199

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    G     + +K+  R++ T EL   N        L  +TG    +  L    
Sbjct: 200 T-----DTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGLRAPLACLSEAR 254

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I+  ++   R +   A+ YAR+R   G  +    + +  + D+A+++     LS  L 
Sbjct: 255 YGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLG 314

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D    R ++ ++ ++         C+ A  +       +GG+G   E  + RH
Sbjct: 315 RLKDRVGLRPDQVSFGKLNNTREALKICRTARTI-------LGGNGISLEYPVIRH 363


>gi|319763608|ref|YP_004127545.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824127|ref|YP_004387430.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118169|gb|ADV00658.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309499|gb|AEB83914.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV+ +
Sbjct: 123 MGVTEPTTGSDTTKLKTTAVK-KDGRWVVNGQKVWISRVQHSDLLILLARTTPVEQVQKK 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 182 SDGLSCFIVE--LDKAIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGTEGKGLKVI 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R V G  +     ++  +A+  ++
Sbjct: 240 FDGLNAERTLI----AAECIGDGYWFLEKARDYANERKVFGRPIGQNQGIQFPLAESFIE 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + +R     D  ++   EA  A       KY   K +       ++  GG G+ 
Sbjct: 296 LEAANLMRWRACQKIDARENAGTEANMA-------KYLAAKASWEAANACLQTHGGFGFA 348

Query: 426 EERSIARHYRES 437
            E  + R +RE+
Sbjct: 349 CEYDVERKFRET 360


>gi|262066044|ref|ZP_06025656.1| acyl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291380295|gb|EFE87813.1| acyl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 378

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 31/273 (11%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG 254
           GLG   LTE   G+D +A  +   K  D  Y L+G K F+++  M+  + + A  +   G
Sbjct: 117 GLGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFITNGEMASFYCITAITDKEKG 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------S 305
              +     +    GL   + ++K+G R+        SNT   +L D  V          
Sbjct: 176 LKGISMFFVEKGTKGLSTGKHEDKMGIRT--------SNTCDVVLEDCRVPASALLGKEG 227

Query: 306 TGPVEDMKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    S  A ++V   +  + EAI Y + R   G  +I    ++  IAD+ 
Sbjct: 228 EGFAIAMKTLDQARSWIACIAVGIAQRGIQEAITYGKERIQFGKPIIKNQALQFKIADME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    A  +        D      +E+A       I K +   +A  V +EA++  GG G
Sbjct: 288 IKTETARQMVAHALTKMDLNLPYGKESA-------IAKCYAGDIAMEVSSEAIQIFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y  E  + +  R++    I  G+     + + N
Sbjct: 341 YSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|221126227|ref|XP_002161167.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase, partial
           [Hydra magnipapillata]
          Length = 266

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D A + +  + + +   + L+G K W  +SP++D FI+ A  E +    +
Sbjct: 8   FGLTEPNFGSDPAGMATNAKYVPEKKCFILNGSKQWITNSPIADVFIIWANCEDKE---I 64

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              +LE G   GL    ++ K   R++ T       V +   N   ++ G L    G + 
Sbjct: 65  RGFILEKGM-KGLTAPNIEGKFSLRASKTGSIFMEDVVVPEKNLLPYVTG-LKGPFGCLT 122

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + +  I    A   +      L  A +Y   RH  G  L    ++++ +ADI  ++A   
Sbjct: 123 NARYGI----AWGVLGAAEFCLHMARNYTLERHQFGRPLAQNQLIQKKLADILTEVAIGL 178

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               ++    D+ K   E       M  + K   C  A      A + +GG+G  +E  +
Sbjct: 179 QSCLQVGRLMDKKKVAPE-------MVSLIKRNSCGKALDAARLARDMLGGNGVSDEYHV 231

Query: 431 ARH 433
            RH
Sbjct: 232 IRH 234


>gi|88855626|ref|ZP_01130289.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
           PHSC20C1]
 gi|88814950|gb|EAR24809.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
           PHSC20C1]
          Length = 394

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 17/245 (6%)

Query: 200 LGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCF 256
            GLTE   G+D A  + +  ++  D        +W  +  +SD  I+ A+ E   +V  F
Sbjct: 136 FGLTEPLSGSDTAQGLQTVAKRDGDNWIINGAKRWIGNGSISDVTIIWARDEADNQVKGF 195

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           +VP      S  G    R++NK   R     ++   N        L  S    E   +L 
Sbjct: 196 IVPT-----STPGYSATRIENKQALRIVQNADIVLENVVVPETNRLQKSQSFRETAAVLR 250

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               + A  +V     +   A+ YA  R   G  +    +++  +A    +I A+  +  
Sbjct: 251 LTRAEVAWAAVGNSIGAYEAAVKYADERIQFGKSISSHQLVQEHLAKSLGNITASIGMVT 310

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R++   DE   + E AA A+      +Y   +M   V A   E +GG+G + +  + RH+
Sbjct: 311 RVSEMLDEGIQKDEHAALAK------EYTTSRMRETV-AWCRELLGGNGIVLDYGVMRHF 363

Query: 435 RESPA 439
            ++ A
Sbjct: 364 ADAEA 368


>gi|144900537|emb|CAM77401.1| Acyl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 554

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 45/303 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + +  +  ++ L  T    ++W PKI S E  PT                TE   G
Sbjct: 246 GSLGTRAEIAGELIRLGGTQEQKEEWLPKIASGEILPTAV-------------FTEPNTG 292

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  D  Y ++G+K W   +  +D   +L + +        +  FL P++
Sbjct: 293 SDLGSLRTRAVKEGDD-YVVTGNKTWITHASRTDVMALLVRTDPNTKDWRGLSMFLAPKV 351

Query: 262 L---EDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KI 314
               E+  P  G+    +K  +G R     EL F    GF +   N+  G VE     ++
Sbjct: 352 RGTEENPFPTPGMTGGEIK-VLGYRGMKEYELGFD---GFKVPAANL-LGQVEGQGFKQL 406

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   + +A+        YA+ R   G  +   P +   IA +A++   A
Sbjct: 407 METFESARIQTAARAIGVAQNAMEIGQQYAKDRVQFGKPIYKFPRVACKIAWMAVETMIA 466

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   D       EA  A+++         ++A +    A++  GG+GY EE  
Sbjct: 467 RQLTYFSAREKDGGHRCDIEAGMAKLLG-------ARVAWSNADNALQVHGGNGYAEEYQ 519

Query: 430 IAR 432
           I+R
Sbjct: 520 ISR 522


>gi|145592594|ref|YP_001156891.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145301931|gb|ABP52513.1| butyryl-CoA dehydrogenase [Salinispora tropica CNB-440]
          Length = 384

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 37/280 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEG----- 251
            GLTE   G+D     ++     S   + ++G K F+++  +D    + +A V G     
Sbjct: 123 FGLTEPGFGSDAGGTQTRAVLDESTEEWVINGSKAFITNSGTDITDLVTVAAVTGTRPDG 182

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
              +   +VP     G+P G       +K+G  ++ T EL F +     G LLG+     
Sbjct: 183 SKELSTIIVP----TGTP-GFTVAPGYSKVGWTASDTHELTFDDCRVPAGNLLGERG--R 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G  + ++IL   D   ++++ + V LA     E++ YA+ RH  G  +     ++  IAD
Sbjct: 236 GFAQFLRIL---DEGRIAIAALAVGLAQGCVDESVRYAKERHAFGRPIGANQAIQFKIAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + L +  A     RLA  + +A +R       +  A I K     +A     +A +  GG
Sbjct: 293 MELRVHTA-----RLA--YYDAAARMLAGEPFKRQAAIAKLHASTIAVDNARDATQIHGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            G++ E  +AR +R+  A  + +G G + V  ++   E G
Sbjct: 346 YGFMNEFPVARFWRD--AKILEIGEGTSEVQRMIIARELG 383


>gi|15839783|ref|NP_334820.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|13879912|gb|AAK44634.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
          Length = 396

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D AA+ ++ ++         G  W  +  ++D  I+ A  +  +  F+VP
Sbjct: 141 FGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVP 200

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    G     + +K+  R++ T EL   N        L  +TG    +  L    
Sbjct: 201 T-----DTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGLRAPLACLSEAR 255

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I+  ++   R +   A+ YAR+R   G  +    + +  + D+A+++     LS  L 
Sbjct: 256 YGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLG 315

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D    R ++ ++ ++         C+ A  +       +GG+G   E  + RH
Sbjct: 316 RLKDRVGLRPDQVSFGKLNNTREALKICRTARTI-------LGGNGISLEYPVIRH 364


>gi|15799722|ref|NP_285734.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|15829296|ref|NP_308069.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128033|ref|NP_414581.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|24111485|ref|NP_705995.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2a str. 301]
 gi|26245963|ref|NP_752002.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|30061607|ref|NP_835778.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2a str. 2457T]
 gi|74310659|ref|YP_309078.1| crotonobetainyl-CoA dehydrogenase [Shigella sonnei Ss046]
 gi|82775441|ref|YP_401788.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae Sd197]
 gi|89106923|ref|AP_000703.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. W3110]
 gi|91209100|ref|YP_539086.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|117622330|ref|YP_851243.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|157156236|ref|YP_001461209.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|157159508|ref|YP_001456826.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli HS]
 gi|168751704|ref|ZP_02776726.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168756866|ref|ZP_02781873.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762802|ref|ZP_02787809.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766730|ref|ZP_02791737.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776958|ref|ZP_02801965.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781739|ref|ZP_02806746.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785093|ref|ZP_02810100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC869]
 gi|168801923|ref|ZP_02826930.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC508]
 gi|170021603|ref|YP_001726557.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|170079702|ref|YP_001729022.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170680462|ref|YP_001742157.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|188492842|ref|ZP_03000112.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 53638]
 gi|191169683|ref|ZP_03031374.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|193066226|ref|ZP_03047279.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E22]
 gi|193070977|ref|ZP_03051906.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194429857|ref|ZP_03062369.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B171]
 gi|194439678|ref|ZP_03071748.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|195937713|ref|ZP_03083095.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808746|ref|ZP_03251083.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812666|ref|ZP_03253995.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821852|ref|ZP_03262172.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399530|ref|YP_002268647.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917231|ref|YP_002291315.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215485201|ref|YP_002327632.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217325339|ref|ZP_03441423.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14588]
 gi|218547486|ref|YP_002381277.1| crotonobetainyl-CoA dehydrogenase [Escherichia fergusonii ATCC
           35469]
 gi|218556979|ref|YP_002389892.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218687915|ref|YP_002396127.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218693511|ref|YP_002401178.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218698459|ref|YP_002406088.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IAI39]
 gi|218703300|ref|YP_002410819.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|227885062|ref|ZP_04002867.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 83972]
 gi|237704183|ref|ZP_04534664.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|238899444|ref|YP_002925240.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BW2952]
 gi|253774929|ref|YP_003037760.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037456|ref|ZP_04871533.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|254160164|ref|YP_003043272.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|254791176|ref|YP_003076013.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256020121|ref|ZP_05433986.1| crotonobetainyl-CoA dehydrogenase [Shigella sp. D9]
 gi|256025356|ref|ZP_05439221.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|260842277|ref|YP_003220055.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|260853250|ref|YP_003227141.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|260866190|ref|YP_003232592.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O111:H- str. 11128]
 gi|261226797|ref|ZP_05941078.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255200|ref|ZP_05947733.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291280863|ref|YP_003497681.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403113|ref|ZP_06647210.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|293408132|ref|ZP_06651972.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B354]
 gi|293417915|ref|ZP_06660537.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B185]
 gi|297519862|ref|ZP_06938248.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli OP50]
 gi|298378641|ref|ZP_06988525.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300816074|ref|ZP_07096297.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 107-1]
 gi|300821956|ref|ZP_07102100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 119-7]
 gi|300900938|ref|ZP_07119073.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 198-1]
 gi|300905442|ref|ZP_07123209.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 84-1]
 gi|300919590|ref|ZP_07136082.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 115-1]
 gi|300924012|ref|ZP_07140012.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 182-1]
 gi|300928662|ref|ZP_07144181.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 187-1]
 gi|300939452|ref|ZP_07154114.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 21-1]
 gi|300948643|ref|ZP_07162727.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 116-1]
 gi|300956969|ref|ZP_07169221.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 175-1]
 gi|300981012|ref|ZP_07175289.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 45-1]
 gi|301019773|ref|ZP_07183919.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 69-1]
 gi|301024784|ref|ZP_07188422.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 196-1]
 gi|301048422|ref|ZP_07195449.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 185-1]
 gi|301305070|ref|ZP_07211171.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 124-1]
 gi|301330191|ref|ZP_07222853.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 78-1]
 gi|306815363|ref|ZP_07449512.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|307136642|ref|ZP_07495998.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli H736]
 gi|307311507|ref|ZP_07591149.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|309787306|ref|ZP_07681918.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|309796022|ref|ZP_07690434.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 145-7]
 gi|312970133|ref|ZP_07784315.1| acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|331640489|ref|ZP_08341637.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H736]
 gi|331645146|ref|ZP_08346257.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M605]
 gi|331650931|ref|ZP_08351959.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M718]
 gi|331661078|ref|ZP_08362010.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA206]
 gi|331661406|ref|ZP_08362330.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA143]
 gi|331666273|ref|ZP_08367154.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA271]
 gi|331680610|ref|ZP_08381269.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H591]
 gi|331681423|ref|ZP_08382060.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H299]
 gi|332281274|ref|ZP_08393687.1| crotonobetaine reductase subunit II FAD-binding [Shigella sp. D9]
 gi|45593149|sp|P60584|CAIA_ECOLI RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593150|sp|P60585|CAIA_ECOL6 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593151|sp|P60586|CAIA_ECO57 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593152|sp|P60587|CAIA_SHIFL RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|122990881|sp|Q1RGF9|CAIA_ECOUT RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|123746061|sp|Q3Z5W9|CAIA_SHISS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|123755798|sp|Q32K58|CAIA_SHIDS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991430|sp|A7ZHD0|CAIA_ECO24 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991431|sp|A7ZVY9|CAIA_ECOHS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991432|sp|A1A789|CAIA_ECOK1 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|189081541|sp|B1IRD7|CAIA_ECOLC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699660|sp|B7MAG2|CAIA_ECO45 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699661|sp|B5YYD3|CAIA_ECO5E RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699662|sp|B7NHE3|CAIA_ECO7I RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699664|sp|B1XBG4|CAIA_ECODH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699665|sp|B7N7R4|CAIA_ECOLU RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699666|sp|B6HYZ0|CAIA_ECOSE RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699667|sp|B1LFX2|CAIA_ECOSM RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699668|sp|B7LWN0|CAIA_ESCF3 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813523|sp|B7UI85|CAIA_ECO27 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813524|sp|B7L4G2|CAIA_ECO55 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813525|sp|B7MNP6|CAIA_ECO81 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|259585573|sp|C4ZPW5|CAIA_ECOBW RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|12512726|gb|AAG54342.1|AE005180_9 probable carnitine operon oxidoreductase [Escherichia coli O157:H7
           str. EDL933]
 gi|26106360|gb|AAN78546.1|AE016755_46 Crotonobetainyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|563862|emb|CAA52111.1| caiA [Escherichia coli]
 gi|1786223|gb|AAC73150.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13359498|dbj|BAB33465.1| putative carnitine operon oxidoreductase [Escherichia coli O157:H7
           str. Sakai]
 gi|24050237|gb|AAN41702.1| probable carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
 gi|30039849|gb|AAP15583.1| probable carnitine operon oxidoreductase [Shigella flexneri 2a str.
           2457T]
 gi|73854136|gb|AAZ86843.1| probable carnitine operon oxidoreductase [Shigella sonnei Ss046]
 gi|81239589|gb|ABB60299.1| probable carnitine operon oxidoreductase [Shigella dysenteriae
           Sd197]
 gi|85674294|dbj|BAB96608.2| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K12 substr. W3110]
 gi|91070674|gb|ABE05555.1| probable carnitine operon oxidoreductase [Escherichia coli UTI89]
 gi|115511454|gb|ABI99528.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|157065188|gb|ABV04443.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli HS]
 gi|157078266|gb|ABV17974.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|169756531|gb|ACA79230.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|169887537|gb|ACB01244.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170518180|gb|ACB16358.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|187767723|gb|EDU31567.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014289|gb|EDU52411.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488041|gb|EDU63144.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 53638]
 gi|189000668|gb|EDU69654.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356074|gb|EDU74493.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364115|gb|EDU82534.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366991|gb|EDU85407.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374798|gb|EDU93214.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376006|gb|EDU94422.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC508]
 gi|190900276|gb|EDV60134.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|192926151|gb|EDV80792.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E22]
 gi|192955707|gb|EDV86181.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194412076|gb|EDX28386.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B171]
 gi|194421363|gb|EDX37380.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|208728547|gb|EDZ78148.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733943|gb|EDZ82630.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741975|gb|EDZ89657.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160930|gb|ACI38363.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747004|gb|ACI71809.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747006|gb|ACI71810.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747008|gb|ACI71811.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747010|gb|ACI71812.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747012|gb|ACI71813.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209910490|dbj|BAG75564.1| putative carnitine operon oxidoreductase [Escherichia coli SE11]
 gi|215263273|emb|CAS07588.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217321560|gb|EEC29984.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350243|emb|CAU95926.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           55989]
 gi|218355027|emb|CAQ87633.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia
           fergusonii ATCC 35469]
 gi|218363748|emb|CAR01408.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           S88]
 gi|218368445|emb|CAR16181.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           IAI39]
 gi|218425479|emb|CAR06261.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           ED1a]
 gi|218430397|emb|CAR11264.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           UMN026]
 gi|222031871|emb|CAP74609.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli LF82]
 gi|226840562|gb|EEH72564.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|226902095|gb|EEH88354.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|227837891|gb|EEJ48357.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 83972]
 gi|238860673|gb|ACR62671.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BW2952]
 gi|242375878|emb|CAQ30559.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253325973|gb|ACT30575.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972065|gb|ACT37736.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           B str. REL606]
 gi|253976274|gb|ACT41944.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BL21(DE3)]
 gi|254590576|gb|ACT69937.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O157:H7 str. TW14359]
 gi|257751899|dbj|BAI23401.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|257757424|dbj|BAI28921.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|257762546|dbj|BAI34041.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O111:H- str. 11128]
 gi|260450752|gb|ACX41174.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|281177254|dbj|BAI53584.1| putative carnitine operon oxidoreductase [Escherichia coli SE15]
 gi|284919820|emb|CBG32875.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 042]
 gi|290760736|gb|ADD54697.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291430028|gb|EFF03042.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|291430633|gb|EFF03631.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B185]
 gi|291472383|gb|EFF14865.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B354]
 gi|294490605|gb|ADE89361.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IHE3034]
 gi|298280975|gb|EFI22476.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|299880274|gb|EFI88485.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 196-1]
 gi|300299715|gb|EFJ56100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 185-1]
 gi|300316259|gb|EFJ66043.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 175-1]
 gi|300355601|gb|EFJ71471.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 198-1]
 gi|300399110|gb|EFJ82648.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 69-1]
 gi|300402720|gb|EFJ86258.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 84-1]
 gi|300409048|gb|EFJ92586.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 45-1]
 gi|300413336|gb|EFJ96646.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 115-1]
 gi|300419736|gb|EFK03047.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 182-1]
 gi|300451869|gb|EFK15489.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 116-1]
 gi|300455673|gb|EFK19166.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 21-1]
 gi|300463331|gb|EFK26824.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 187-1]
 gi|300525556|gb|EFK46625.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 119-7]
 gi|300531281|gb|EFK52343.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 107-1]
 gi|300839677|gb|EFK67437.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 124-1]
 gi|300843831|gb|EFK71591.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 78-1]
 gi|305851025|gb|EFM51480.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|306908486|gb|EFN38984.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|307551884|gb|ADN44659.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|307629612|gb|ADN73916.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UM146]
 gi|308120264|gb|EFO57526.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 145-7]
 gi|308924884|gb|EFP70379.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|309700252|emb|CBI99540.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310337631|gb|EFQ02742.1| acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|312944645|gb|ADR25472.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313646584|gb|EFS11045.1| putative tail fiber protein [Shigella flexneri 2a str. 2457T]
 gi|315059265|gb|ADT73592.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli W]
 gi|315134735|dbj|BAJ41894.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli DH1]
 gi|315255686|gb|EFU35654.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 85-1]
 gi|315285135|gb|EFU44580.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 110-3]
 gi|315293387|gb|EFU52739.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 153-1]
 gi|315298443|gb|EFU57698.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 16-3]
 gi|315616184|gb|EFU96803.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           3431]
 gi|320190440|gb|EFW65090.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320197517|gb|EFW72131.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli WV_060327]
 gi|320200443|gb|EFW75029.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli EC4100B]
 gi|320642079|gb|EFX11430.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647442|gb|EFX16237.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H- str.
           493-89]
 gi|320652776|gb|EFX21014.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H- str. H
           2687]
 gi|320658165|gb|EFX25894.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320663474|gb|EFX30758.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668786|gb|EFX35581.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323157901|gb|EFZ44004.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           EPECa14]
 gi|323160042|gb|EFZ46005.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           E128010]
 gi|323166090|gb|EFZ51869.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella sonnei
           53G]
 gi|323171459|gb|EFZ57106.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           LT-68]
 gi|323176346|gb|EFZ61938.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1180]
 gi|323181736|gb|EFZ67149.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1357]
 gi|323190280|gb|EFZ75556.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           RN587/1]
 gi|323380178|gb|ADX52446.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
 gi|323935092|gb|EGB31459.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
 gi|323939739|gb|EGB35941.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323950962|gb|EGB46839.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|323955236|gb|EGB51009.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
 gi|323970713|gb|EGB65967.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
 gi|323975793|gb|EGB70889.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
 gi|324008384|gb|EGB77603.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 57-2]
 gi|324017693|gb|EGB86912.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 117-3]
 gi|324112560|gb|EGC06537.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia
           fergusonii B253]
 gi|324118391|gb|EGC12285.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
 gi|326345243|gb|EGD68986.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           1125]
 gi|326346904|gb|EGD70638.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           1044]
 gi|330909889|gb|EGH38399.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli AA86]
 gi|331040235|gb|EGI12442.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H736]
 gi|331045903|gb|EGI18022.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M605]
 gi|331051385|gb|EGI23434.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M718]
 gi|331052120|gb|EGI24159.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA206]
 gi|331061321|gb|EGI33284.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA143]
 gi|331066484|gb|EGI38361.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA271]
 gi|331072073|gb|EGI43409.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H591]
 gi|331081644|gb|EGI52805.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H299]
 gi|332103626|gb|EGJ06972.1| crotonobetaine reductase subunit II FAD-binding [Shigella sp. D9]
 gi|332341371|gb|AEE54705.1| crotonobetainyl-CoA dehydrogenase CaiA [Escherichia coli UMNK88]
 gi|332762351|gb|EGJ92618.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 2747-71]
 gi|332762598|gb|EGJ92863.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 4343-70]
 gi|332764880|gb|EGJ95108.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-671]
 gi|332768826|gb|EGJ99005.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 2930-71]
 gi|333009194|gb|EGK28650.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-218]
 gi|333010530|gb|EGK29963.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri VA-6]
 gi|333011421|gb|EGK30835.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-272]
 gi|333021660|gb|EGK40909.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-227]
 gi|333022452|gb|EGK41690.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-304]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|326333699|ref|ZP_08199933.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325948477|gb|EGD40583.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 392

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 24/271 (8%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF- 256
           G GLTE   G+D  A  ++   + DG  + + G K F+++  S +   +  V  R G   
Sbjct: 122 GFGLTEPGAGSDAGATATK--AVLDGDEWVVDGAKQFITNSGS-SITSVVTVTARTGTRE 178

Query: 257 -----LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS--- 305
                +   ++  G+P G   ++  +K+G  ++ T  L F         LLG+       
Sbjct: 179 NGKPEISTIMIPSGTP-GFTAEKAYDKLGWHASDTHPLSFDGARVPADHLLGERGRGYAQ 237

Query: 306 -TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++D ++ I    A ++V  ++  L  A+ YA  R   GG +  +  +   IAD+ +
Sbjct: 238 FLATLDDGRVAI----AALAVGCIQACLDMALEYAGERQTFGGPIGRKQGVAFQIADLEV 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L++  A       S +      +  A   K +  + A      A +  GG G+
Sbjct: 294 MLRASRLLTYEAAAMKSGLDSGAVTMKEFKQAAAAAKLYATESAVTATRIATQIFGGYGF 353

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +EE  +AR YR+  A  + +G G + V  +L
Sbjct: 354 MEEYPVARFYRD--AKILEIGEGTSEVQRML 382


>gi|253797323|ref|YP_003030324.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 1435]
 gi|289552649|ref|ZP_06441859.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
 gi|297632882|ref|ZP_06950662.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN 4207]
 gi|297729857|ref|ZP_06958975.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN R506]
 gi|313657186|ref|ZP_07814066.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN V2475]
 gi|253318826|gb|ACT23429.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 1435]
 gi|289437281|gb|EFD19774.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
 gi|328457110|gb|AEB02533.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 4207]
          Length = 395

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D AA+ ++ ++         G  W  +  ++D  I+ A  +  +  F+VP
Sbjct: 140 FGLTEPDVGSDPAAMKTRARRDGPDWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVP 199

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    G     + +K+  R++ T EL   N        L  +TG    +  L    
Sbjct: 200 T-----DTPGFTANTIGHKLSLRASITSELVLDNVRLPADAMLPGATGLRAPLACLSEAR 254

Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             I+  ++   R +   A+ YAR+R   G  +    + +  + D+A+++     LS  L 
Sbjct: 255 YGIVWGAMGAARSAWQCALDYARQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLG 314

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D    R ++ ++ ++         C+ A  +       +GG+G   E  + RH
Sbjct: 315 RLKDRVGLRPDQVSFGKLNNTREALKICRTARTI-------LGGNGISLEYPVIRH 363


>gi|218552624|ref|YP_002385537.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|293476703|ref|ZP_06665111.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B088]
 gi|226699663|sp|B7M0D6|CAIA_ECO8A RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|218359392|emb|CAQ96931.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           IAI1]
 gi|291321156|gb|EFE60598.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B088]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|83952006|ref|ZP_00960738.1| glutaryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83837012|gb|EAP76309.1| glutaryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 417

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255
            GLTE   G+D A + ++ +KI  G Y L G K W  +SP++D F++ A+    +G++  
Sbjct: 159 FGLTEPDAGSDPAGMKTRAEKIEGG-YRLKGSKMWISNSPIADVFVVWAKSDAHDGKIRG 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F    +LE G   GL   +++ K   R++ T E+           LL ++    GP    
Sbjct: 218 F----VLEKGM-KGLSAPKIEGKQSLRASITGEIVMDGVEVGEDALLPNVEGLKGP---- 268

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI-----ADIALDIA 367
                L+ A   ++   +  AE   +A R++        +P+ +  I     A++  +I 
Sbjct: 269 --FGCLNRARYGIAWGVMGAAEFCWHAARQYGLDRQQFRKPLAQTQIFQLKLANMQTEIT 326

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + R+    D A +  E       M  + K   C  A  +   A +  GG+G  EE
Sbjct: 327 LGLQAALRVGRLMDAANAAPE-------MISLIKRNNCGKALEIARHARDMHGGNGISEE 379

Query: 428 RSIARH 433
             + RH
Sbjct: 380 FQVIRH 385


>gi|332796168|ref|YP_004457668.1| acyl-CoA dehydrogenase [Acidianus hospitalis W1]
 gi|332693903|gb|AEE93370.1| acyl-CoA dehydrogenase [Acidianus hospitalis W1]
          Length = 378

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 16/261 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFL 257
           + LTE   G+D+ A+ +  +   D +  L+G K F S+   S   ++LA+  G  G    
Sbjct: 120 VALTEPAAGSDLGALQTTAKPDGDEL-VLNGEKIFTSAASFSTKMVVLARTSGNPGDKNG 178

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMK 313
           +  LL D    G+   +L + +G R      ++F+N        +  + +   G ++ + 
Sbjct: 179 ISLLLIDSKLPGIEIHKL-DLMGIRGAGVSYVKFNNVRIPKDSIIGKEGDAFRGAIKAL- 236

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++     A ++V   R ++ EAI+ A  R   G  LI+Q  +   +AD  + + AA  L+
Sbjct: 237 MISRNGYAGIAVGIARGAVEEAINRAATRKQFGKALIEQEWIGFNLADAYIKVEAARLLT 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A+  D+      EA+ A       KY+    A      A+   GG G      + R 
Sbjct: 297 WRAASLLDKGVEALTEASMA-------KYFAAVTAAETTRTALHIFGGHGLNRGSKVERL 349

Query: 434 YRESPANSILLGSGNAMVLDV 454
           YR++    I  G+    +L V
Sbjct: 350 YRDAKIMEIAEGTNEMQLLAV 370


>gi|297162665|gb|ADI12377.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 582

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 22/235 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLV-- 258
           ++E   G+D+    +      DG Y L+G KW + +     F+ + A VEG +G  L+  
Sbjct: 131 VSEPDHGSDLGTNETTASPDGDG-YVLTGEKWPVGNATRGRFLSVYAAVEG-IGPSLLLV 188

Query: 259 -PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
             R L  GS +   + R    +G R +    + F  T    G LLG      G  + +++
Sbjct: 189 DKRQLSAGSWDNHPFVR---TVGLRGHDLSGITFRGTEVPAGALLG--RPGAGLAQILQV 243

Query: 315 LIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +AI  +S+  M   L  A+ +A  R + G  +   PV++R +    LD+  A   
Sbjct: 244 LQITRTAIGALSLGTMDSVLRIALRHACSRVLYGQEIYRIPVIRRHLVHAHLDLLIAECT 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  +A +   A SR        + + + KY    +   V+ E+   +G  GY+ E
Sbjct: 304 TLPVARALSVAPSRLS------LWSSVVKYLVPTLGEEVVQESARVLGARGYLRE 352


>gi|262373491|ref|ZP_06066769.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311244|gb|EEY92330.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 390

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 32/287 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ S E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMASGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG      G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPKENLLG--MEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      +  +A++  +I              D       E +     A   KY 
Sbjct: 283 AFGKPIGTFQNTRFKLAELRTEIDFCRTY-------LDRCMELQLEESLGVDAAAAAKYK 335

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 336 ISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIM 382


>gi|239503452|ref|ZP_04662762.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHYRINGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+   +     +  LL D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTGPQAKAKGISILLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGAILGAIELTKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|221042746|dbj|BAH13050.1| unnamed protein product [Homo sapiens]
          Length = 357

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 38/259 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256
           LTE   G+D A++ +  +K  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 83  LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCI 141

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P GL + + + K+G  S  T  + F +    +   +       E    LI
Sbjct: 142 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS-----EGQGFLI 191

Query: 317 YLDSAIMSVSGMRVSLAE----AIHYA---RRRHVS-----GGILIDQPVMKRAIADIAL 364
               A+  ++G R+++A     A H +    R H++     G  L     ++  +AD+A 
Sbjct: 192 ----AVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMAT 247

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R     + A +  EE   A  +  + K +      A+  +A++  GG GY
Sbjct: 248 RLVAAR-LMVR-----NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 301

Query: 425 IEERSIARHYRESPANSIL 443
           +++ ++ ++ R+S  + IL
Sbjct: 302 LKDYAVQQYVRDSRVHQIL 320


>gi|188592211|ref|YP_001796809.1| acyl-CoA deshydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170938585|emb|CAP63572.1| putative acyl-CoA deshydrogenase [Cupriavidus taiwanensis LMG
           19424]
          Length = 385

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE + G+D+A I ++ +   D  + L+G K ++S+  ++D  I++A+ +      L 
Sbjct: 124 VAMTEPQTGSDLAGIRTRAEDHGDH-WVLNGAKTYISNGQLADVVIVVARTDPERSHGLT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
             ++E G P G    R   K+G  S  T EL F N     +   NV   P +  + L   
Sbjct: 183 LFIVERGMP-GFERGRKLRKLGLHSQDTSELFFDNV---RVPKANVLGEPGQAFRYLTRH 238

Query: 318 -----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A   ++  +V+    + Y R R   G  +      +  +A++   + A    
Sbjct: 239 LAEERLIGACGYMASAQVAFDITLDYVRERKAFGRAIGTFQNSRFKLAELRAQLDALQTF 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +     +      E AA A+++         ++   ++ E ++  GG+GY+EE  I R
Sbjct: 299 VDQCVLQHNAGTLTVETAASAKLL-------TSELQGRMVDEGVQLHGGAGYMEEYRICR 351

Query: 433 HYRESPANSILLGSGNAM 450
            Y ++  + I  GS   M
Sbjct: 352 MYADARISRIYAGSSEIM 369


>gi|297160332|gb|ADI10044.1| acyl-CoA dehydrogenase domain protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 385

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 41/282 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P     +   + +TE   G+D+A + +  +   DG  Y L+G K F++   ++D  ++ A
Sbjct: 114 PFIAGDMMTAIAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCA 173

Query: 248 QV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +      E R G   +  L+ D    G    R   K+G +++ T EL F+        D+
Sbjct: 174 RTAPATPEDRRGGISI--LVVDTRSEGYAVGRKLEKLGLKTSDTAELSFT--------DV 223

Query: 303 NVSTGPVEDM-----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGI 348
            V   PV D+     +   YL   +          + +    ++  A  Y   R + G  
Sbjct: 224 KV---PVADLLGEEGRAFEYLTHNLPQERLGIAVSAYAQAAAAVEFAKAYVADRTIFGKT 280

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      K A+AD   ++ A  A+  R   + D  +  + +AA A++       +  + A
Sbjct: 281 VASFQNTKFALADCKSEVDAMQAVVDRALEAHDAGELTAADAASAKL-------FTTERA 333

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             VI + ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 334 AVVIDKCLQLHGGYGYMMEYPIARLYADTRVTRIYGGTSEVM 375


>gi|218781229|ref|YP_002432547.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762613|gb|ACL05079.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 31/248 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K  +    GLTE   G+D A I +  ++  +G + +SG K F++      +++    
Sbjct: 114 PLAKGELYFSFGLTEPNAGSDAANIDTHAERDGNGPWMVSGGKTFITGGTVANYVVTFAR 173

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DLN 303
                   +   L D    G  Y ++  K+G R + T  L +         +LG    LN
Sbjct: 174 TASSRYKGITAFLVDTQDKGFSYSKIA-KLGFRGSDTATLFYDQVPVPEDMILGGPEGLN 232

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----GILIDQPVMKRAI 359
              G     +++  L+   +S++   + +A++   A   HV       I   +  ++  +
Sbjct: 233 QGWG-----QMVRLLNGERLSLAACSLGIAQSAFDAALNHVRQLPPPTIAGSRQRVEHRL 287

Query: 360 ADIALDIAAATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           A++A  + AA AL++R A    N  +  +  S           ++K++C + A  + AEA
Sbjct: 288 AEMAAQLEAARALAYRTAWMHTNKMECVRETS-----------MSKFFCTETAKQIAAEA 336

Query: 416 MECIGGSG 423
           M  +G  G
Sbjct: 337 MTIMGPDG 344


>gi|149597691|ref|XP_001521173.1| PREDICTED: similar to Acad9-prov protein, partial [Ornithorhynchus
           anatinus]
          Length = 321

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++ +   DG Y  L+G K W  +  +++ F + A+ E         
Sbjct: 75  LTEPGSGSDAASIQTKAKLTEDGKYFILNGSKIWISNGGLANIFTVFAKTEVIDYNGLRK 134

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      ++G+  V  G
Sbjct: 135 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVYFENTKVPLENVIGE--VGDG 187

Query: 308 PVEDMKILIYLDSAIMSV----SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
               M IL   +S   S+    +GM   L E    YA  R      + +  ++K   A +
Sbjct: 188 FKVAMNIL---NSGRFSMGSAAAGMLKKLIEMTAEYACTRKQFNKSISEFGLIKEKFALM 244

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D       S EAA  ++ +     W C      ++EA++ IG
Sbjct: 245 AQKAYVMESMAYLTAGMLDRPGFPDCSVEAAMVKVFSS-EGAWIC------VSEALQIIG 297

Query: 421 GSGYIEERSIARHYRES 437
           G GY++     R  R+S
Sbjct: 298 GLGYMKNYPYERFLRDS 314


>gi|114798575|ref|YP_759990.1| isovaleryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114738749|gb|ABI76874.1| isovaleryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  ++P +D  ++ A+ +   G   +
Sbjct: 131 LAMSESGAGSDVVSMKLRADKKGD-HYVLNGTKMWITNAPDADTLVVYAKTDPNGGSKGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-EDMKILIY 317
              L +    G    +  +K+G R + T EL F +     + + NV  GPV    +IL+ 
Sbjct: 190 TAFLIERGFKGFSVAQKLDKLGMRGSETGELVFEDCE---VPEENV-MGPVGAGARILMS 245

Query: 318 ---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               + A++S      M+  L   I Y   R   G  + +  +++  +AD+ + + AA A
Sbjct: 246 GLDYERAVLSAGPTGIMQACLDVVIPYIHDRKQFGQSIGEFQLVQGKLADMYVQMNAAKA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA A + A  T       A  +  +A++ +GG+GYI E    
Sbjct: 306 YVYAVAKACDRGETARKDAAGAILYAAET-------ATKLALDAIQLLGGNGYINEYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|284989927|ref|YP_003408481.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284063172|gb|ADB74110.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 384

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 17/243 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259
           LTE   G+D A + +  ++  DG + L+G K +++ +P++D F++ A+ +    G   + 
Sbjct: 122 LTEAEAGSDPAGLRTTARRNGDG-WVLNGTKRYITNAPIADLFVVFARSDPAEKGGRGIS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             + D    G+       K+G     T E+   +    +  D  +        K L  L 
Sbjct: 181 SFVVDAKAPGVTVGPRDKKMGQAGAWTAEVFLDDA--RVPADALIGEEGRGYAKALTVLS 238

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++ + V +A     E++ YA      G  +    +++  +AD   ++ A  A+  
Sbjct: 239 RGRLHIAALCVGMAQRVLDESVAYAATAKQGGAPVGRFQLVQAQLADTHAELLAGRAMVR 298

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +A  +D  +  S       I     K +C +M    +  A++  GG GY+    + R Y
Sbjct: 299 DVAARYDTGEDTS-------IGPSSAKLFCTEMVGRAVDRAVQVHGGLGYLRTTPVERFY 351

Query: 435 RES 437
           R++
Sbjct: 352 RDA 354


>gi|226225846|ref|YP_002759952.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089037|dbj|BAH37482.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 620

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 18/263 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGC 255
           LTE   G+D   I S+ ++  DG  + L+G K W  +   +      AQ     +G++  
Sbjct: 158 LTEPETGSDAQHIVSRTERSPDGTGWILNGRKHWIGNGQRAGVIATFAQTPIERDGKIVH 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
                ++    P G       +K+G R +   EL + N F     +LG++        + 
Sbjct: 218 RPTAFIIRPDMP-GFRVDGTIHKLGIRGSTQAELVYENLFVPDDHVLGEVGKGFRVAVNA 276

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A   V G +  L E   YA  R   GG L +  + +R +A IA +  AA ++
Sbjct: 277 LNGGRLSLASGCVQGSKRLLGEFTRYAEARTQFGGPLANFEITQRKMATIASETYAAESM 336

Query: 373 SFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              LA + D +    + EAA A++ A    +           E ++  GG G+++     
Sbjct: 337 VGALAAAMDGDVVDVALEAACAKVYASDLVWRTAD-------ELVQLAGGRGFVKPWPYE 389

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R+ R++  N I  G+   + L V
Sbjct: 390 RYLRDTRINRIFEGANEILRLFV 412


>gi|238482905|ref|XP_002372691.1| acyl-CoA dehydrogenase [Aspergillus flavus NRRL3357]
 gi|220700741|gb|EED57079.1| acyl-CoA dehydrogenase [Aspergillus flavus NRRL3357]
          Length = 433

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 23/258 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-H 231
           W P +FS E              +  LG+TE  GG+D+A I +   K +DG  Y ++G  
Sbjct: 145 WLPGLFSWE-------------TSFCLGVTEPNGGSDVARIRTSAVKSADGRSYVVNGVK 191

Query: 232 KWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-VE 288
           KW   +P +       +   EG  G   +  L+      G+  Q++ N   N   ++ V+
Sbjct: 192 KWITGAPWATHMTTAVRTGPEGS-GLHGISVLVIPLDSKGVIRQKIYNSGQNAGGSSFVD 250

Query: 289 LE-FSNTFGFLLGDLNVSTGPV-EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           LE        L+G+ N     V ++     Y+  AI      R  LA A+ YA  R   G
Sbjct: 251 LEDVRVPVENLIGEENKGFPIVMKNFNKERYI-MAIQCNRKSRTCLAMALSYAMTRKTFG 309

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI   +++R +A++A  + A  A   +LA     A    +    A  +A + K    +
Sbjct: 310 KPLIHNQIIRRKLAELAHRVEAHWAWLEQLAFYITNAPLGWQSPQIASRIA-LLKVQGGQ 368

Query: 407 MAPAVIAEAMECIGGSGY 424
           M      EA +  GG+GY
Sbjct: 369 MLELASREAQQIFGGAGY 386


>gi|221129965|ref|XP_002165179.1| PREDICTED: similar to Acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Hydra magnipapillata]
          Length = 529

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 25/257 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+AAI ++ +K  D  + L+G K W     +++ F +LA+ +     + G  
Sbjct: 267 VTEPGAGSDVAAIKTRAEKKGDE-WILNGSKMWITGGGVANWFFVLARSDPDPNAKPGKA 325

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
               +++  SP G+   + +  +G R + T  + F       SN  G +      + G  
Sbjct: 326 FTGFIVDADSP-GITLGKKEINLGQRCSDTRGVNFEDVRVPKSNVLGKVGEGFKYAMGAF 384

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  +  +    A  +V   + +L EA  Y+  R   G  + +   ++  +AD+A  +  A
Sbjct: 385 DKTRPGV----ASAAVGLAQRALDEATKYSTERKTFGTQISNHQAIQFMLADMASGVELA 440

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  R A   D+ +  +         A I K +   +A    ++ ++  GG+GY  E  
Sbjct: 441 RLMVRRAAWELDQGRKNT-------YYASIAKSFASDVANKNASDCVQIFGGNGYNSEYP 493

Query: 430 IARHYRESPANSILLGS 446
             +  R++    I  G+
Sbjct: 494 AEKLMRDAKIFQIYEGT 510


>gi|115899456|ref|XP_785005.2| PREDICTED: similar to ENSANGP00000019082 [Strongylocentrotus
           purpuratus]
 gi|115949323|ref|XP_001190363.1| PREDICTED: similar to ENSANGP00000019082 [Strongylocentrotus
           purpuratus]
          Length = 512

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 22/139 (15%)

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           LD+  + ++G  + +A+A     I YA +R        +QP+     ++  +AD+ + + 
Sbjct: 365 LDAGRIGIAGQALGIAQASIDCAIDYATKREA-----FNQPISRFQTIQTKLADMEVRVE 419

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L+++ A   D   + ++EAA  ++ A     +C         +A++ +GG GY+ +
Sbjct: 420 SARLLTWKAAMMKDAGLNYTQEAAMGKLAASEAATYCSH-------QAIQILGGMGYVTD 472

Query: 428 RSIARHYRESPANSILLGS 446
               RHYR++    I  G+
Sbjct: 473 MPAERHYRDARITEIYEGT 491



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 31/222 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
             L+E   G+D  A ++  +   D  + L+G K W  +   ++A I+ A+ +       +
Sbjct: 152 FALSEPDNGSDAGAASTTARLDGDH-WVLNGAKMWITNGYEAEAAIVFARTDKAMKHKGI 210

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP+  E     GL   + ++K+G ++ +T +L F +     +   N+        K
Sbjct: 211 SAFIVPKPYE-----GLALGKKEDKLGIKATSTCQLMFEDC---RIPKENILGQEGMGFK 262

Query: 314 ILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADI 362
           I +  LD+  + ++G  + +A+A     I YA +R        +QP+     ++  +AD+
Sbjct: 263 IAMSTLDAGRIGIAGQALGIAQASIDCAIDYATKREA-----FNQPISRFQTIQTKLADM 317

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            + + +A  L+++ A   D   + ++EAA  ++ A     +C
Sbjct: 318 EVRVESARLLTWKAAMMKDAGLNYTQEAAMGKLAASEAATYC 359


>gi|262279735|ref|ZP_06057520.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260086|gb|EEY78819.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           calcoaceticus RUH2202]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-VLENDHYRVNGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+ + +     +   L D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVYVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGAIELTKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|260549928|ref|ZP_05824143.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter sp.
           RUH2624]
 gi|260406920|gb|EEX00398.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter sp.
           RUH2624]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 47/292 (16%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y ++G K 
Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDQYRVNGSKT 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  +++A+ + +     +   L D + +G+   R   KIG  +  T EL F 
Sbjct: 155 FISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALDGVKKGRSLQKIGLHAQDTAELFFD 214

Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +               F +L+ +L     P E + I      ++M++  +  ++     Y
Sbjct: 215 DVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGAIELTKDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L      +  +A+  +   AA A   + A  + + +    + A  +    
Sbjct: 264 VLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVAALKCF-- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 322 ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|120437238|ref|YP_862924.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117579388|emb|CAL67857.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 37/290 (12%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGI-YCLS 229
           W    F  E     K  + K +    LG   L+E   G+D  A + +   I  G  Y ++
Sbjct: 96  WGLDSFGNE--EQKKKYLSKLTTGEKLGAFCLSEPEAGSD--ATSQRTTAIDKGDHYIIN 151

Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K W  +   +D ++++AQ +       +   + +    G      + K+G R + T  
Sbjct: 152 GTKNWITNGSTADYYLVIAQTDKEKKHKGINAFIVEKDSEGFEIGPKEQKLGIRGSDTHS 211

Query: 289 LEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           L F++             FGF      +S G        I + +  + ++     LA+  
Sbjct: 212 LNFNDVKVPKENRIGEDGFGFKFAMKTLSGGR-------IGIAAQALGIAAGAYELAK-- 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+++R   G  + +   +   +AD+   I A+  +  + A   D+ ++     A A++ 
Sbjct: 263 DYSKQRKAFGTEICNHQAIAFKLADMHTTIEASRHMVMKAAWDKDQGQNYDLSGAMAKL- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +  K A  V  EA++  GG+G+++E  + R  R++    I  G+
Sbjct: 322 ------YASKTAMDVTVEAVQVHGGNGFVKEYHVERLMRDAKITQIYEGT 365


>gi|161504803|ref|YP_001571915.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081542|sp|A9MQH5|CAIA_SALAR RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|160866150|gb|ABX22773.1| hypothetical protein SARI_02927 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++        VEL+  + FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDEVELDEKDRFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + A     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNA----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|295695878|ref|YP_003589116.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411480|gb|ADG05972.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 383

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 12/249 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G++ A + +   +  D  Y L+G K F+++ P +D   ++A  +   G   +  
Sbjct: 125 LSEPEAGSNAANLRTVAVRKGDR-YILNGMKHFITNGPEADVVTVMAVTDPSKGIRGITS 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319
            L +    G        K+G R + T +L F +    +   L     G V  +KIL    
Sbjct: 184 FLVEADFAGFRKGPADRKMGLRGSHTCQLFFEDCEVPVENRLGEEGEGYVNALKILTNGR 243

Query: 320 SAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +++ +  +      LA +  +A +R   G  +I+   +   +AD+A+++    +L +R+ 
Sbjct: 244 ASLGARCLGSCEKLLALSTEHALQRVQFGKPIIENQAVAHMLADMAVEVETLKSLLYRVT 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +   +E+A       I K +  +    +   A++  GG GY+ E  + R YR++
Sbjct: 304 AMVDRGEKTIKESA-------IVKLYASEAYNRIADRAVQIFGGMGYMRELPVERFYRDA 356

Query: 438 PANSILLGS 446
               I  G+
Sbjct: 357 RITRIYEGT 365


>gi|325495969|gb|EGC93828.1| crotonobetainyl-CoA dehydrogenase [Escherichia fergusonii ECD227]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|317418587|emb|CBN80625.1| 'Acyl-CoA dehydrogenase family member 9, mitochondrial '
           [Dicentrarchus labrax]
          Length = 630

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 37/255 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------G 251
           LTE   G+D A+I ++     DG  Y ++G K W  +  M+D   + A+ E         
Sbjct: 190 LTEPGSGSDAASIQTRATLSEDGKHYLINGSKIWISNGDMADIMTVFARTEVVVDGVKKD 249

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
           ++  F+V R        G+   + ++K+G R + T E+ F        N  G + G   V
Sbjct: 250 KISAFIVERAF-----GGITSGKPEDKLGIRGSNTCEVSFDNVPVPVENVIGEVGGGFKV 304

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIA 363
           +   +   +  +   SA     GM   L E    YA  R      L +  +++   A +A
Sbjct: 305 AMNILNSGRFSMGSSSA-----GMIKKLIELTSEYAASRKQFNKSLAEFGMIQEKFALMA 359

Query: 364 LDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++     ++++  A   D       S EAA  ++ +     W C      ++EA++ +GG
Sbjct: 360 INAFVMESMAYLTAGMMDRPGLPDCSLEAAMVKVFSS-EGGWIC------VSEALQVLGG 412

Query: 422 SGYIEERSIARHYRE 436
            GY +     R+ R+
Sbjct: 413 LGYTKNYPYERYVRD 427


>gi|260557446|ref|ZP_05829661.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260409072|gb|EEX02375.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 53/316 (16%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L+SP + +      + T    + W PK+ + E             V   + +TE   G+
Sbjct: 91  ELVSPYLQN------IGTEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ AI +Q   + +  Y ++G K F+S+ + +D  +++A+ + +     +   L D + +
Sbjct: 132 DLQAIRTQA-VLENDHYRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALD 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKI 314
           G+   R   KIG  +  T EL F +               F +L+ +L     P E + I
Sbjct: 191 GVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQEL-----PRERLSI 245

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 ++M++  +  ++     Y   R   G  L      +  +A+  +   AA A   
Sbjct: 246 ------SMMALGAILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVD 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A  + + +    + A  +    IT   C      VI + ++  GG GY++E  I+R +
Sbjct: 300 QCAALYQQHQLGVTQVAALKCF--ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFF 352

Query: 435 RESPANSILLGSGNAM 450
            ++    I  G+   M
Sbjct: 353 VDARVQKIYGGTNEIM 368


>gi|296139046|ref|YP_003646289.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027180|gb|ADG77950.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 381

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 12/253 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I S   +  D  + L+G K F+++  + D  ++ A+         +  
Sbjct: 127 MTEPSAGSDLAGIKSTAVRSGDD-WILNGSKTFITNGYTCDVAVIAAKTNPDAKARGISL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
              D S  G    R  +K+G     T EL +S+       L+G+++     + +      
Sbjct: 186 FAVDCSLPGFERGRKLDKVGQPEADTAELFYSDLRVPASALIGEVDRGFYHMMEKLPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + SA+ +V+  +  LAE I Y R R   G  +      K  +AD+   I    A      
Sbjct: 246 IGSAVANVAHAKQILAETIEYTRERKAFGQSIGSFQHNKFLLADLVTKIEMVQAY----- 300

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+A           + A   KY   ++   V+   ++  GG GY+ E   AR + ++
Sbjct: 301 --VDQAVLAHAGGTLTAVDAAKVKYVSAEIQNQVLDSCVQLHGGYGYMREYRAARAWMDA 358

Query: 438 PANSILLGSGNAM 450
               I  GS   M
Sbjct: 359 RVTRIWAGSSEIM 371


>gi|89891840|ref|ZP_01203342.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89515995|gb|EAS18660.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  +  +    + D  Y L+G K W  +   +D +I++AQ +   G   +  
Sbjct: 125 LSEPEAGSDATSQRTTAIDMGDH-YLLNGTKNWITNGNSADYYIVIAQTDKEKGHKGINA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
            + + + +G      ++K+G R + T  L F++             FGF      ++ G 
Sbjct: 184 FIVEKTWDGFEVGPKEDKLGIRGSDTHSLNFNDVKVPKENRIGEDGFGFKFAMKTLAGGR 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                  I + +  + ++     LA+   Y+++R   G  + +   +   +AD+ ++I A
Sbjct: 244 -------IGIAAQALGIASGAFELAK--DYSKQRKAFGTEICNHQAIAFKLADMKVNIDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L    A   D+    +     A++ A  T       A     EA++  GG+GY++E 
Sbjct: 295 SRHLIMHAAWMKDQGMDYNVAGCTAKLFASQT-------AMDTTVEAVQVHGGNGYVKEY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 348 HVERLMRDAKITQIYEGT 365


>gi|46137539|ref|XP_390461.1| hypothetical protein FG10285.1 [Gibberella zeae PH-1]
          Length = 512

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 44/221 (19%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + S+ A++   R  + W  KI +  +    K         I L +TE   G+D+A + + 
Sbjct: 212 TISLTAVLNFAR-DEAWKNKIANEVFSGKKK---------ICLAITEAFAGSDVAGLRTT 261

Query: 218 GQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
            +K  DG  Y ++G  KW  +    D F+  A+ +  +  FL+ R        G+  +++
Sbjct: 262 AEKTPDGKHYIINGTKKWITNGVWCDYFVTGARTDKGLSVFLIER------GEGVETKQI 315

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------KILIYL-----DSAIMS 324
           K              +S T G      +    P E+M       I + L     +   M 
Sbjct: 316 KTS------------YSTTAGTAYVTFDNVKVPAENMLGKENKGIQVILSNFNHERWTMV 363

Query: 325 VSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              +R+S   + E + +A +R V G  LIDQPV+++ +A +
Sbjct: 364 CGSLRLSRSIVEECLKWANQRQVFGKSLIDQPVIRQKLAKM 404


>gi|326434123|gb|EGD79693.1| medium-chain specific acyl-CoA dehydrogenase [Salpingoeca sp. ATCC
           50818]
          Length = 393

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 21/239 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M +  +    G+TE   G+D+A I +  +K  +  Y L+G K W  ++  ++ F +LA+ 
Sbjct: 139 MTEEPLVASYGVTEPIAGSDVAGIKTVAEKKGND-YVLNGQKMWITNAGHANWFFVLAKT 197

Query: 250 EGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGD 301
           +            + DG   GL   R +  +G R + T  + F       +N  G     
Sbjct: 198 DPSAPASKAFTGFIVDGDSAGLTRGRKEMNMGQRCSDTRGVTFEDVVVPAANVLGKEGDG 257

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++ G  +  +  +    A  +V   + +L EA  YA+ R   G  +     +   +AD
Sbjct: 258 FKIAMGAFDRTRPPV----AAGAVGLAQRALHEATTYAQERKAFGRPIAQHQAVAFMLAD 313

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +A+ +  A  ++ R A   D+ +  +         A I K +   +A     +A+E  G
Sbjct: 314 MAIGVETARLITRRAAWEVDQGRRNT-------YYASIAKAYAADVANKCATDAVEVFG 365


>gi|298372014|ref|ZP_06982004.1| acyl-CoA dehydrogenase family protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274918|gb|EFI16469.1| acyl-CoA dehydrogenase family protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 567

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 133/303 (43%), Gaps = 30/303 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           + + LTE   G+D+ A+  +      +  + L+G K F+++  SD  ++LA+ E G    
Sbjct: 171 MSMDLTEPDAGSDLQAVMLRASFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + D    G+  +R++NK G +   T EL + N    L+G+  +  G ++   ++
Sbjct: 231 RGLSMFVYDKRNGGVDVRRIENKKGIKGAPTCELVYKNAKAELVGERRL--GLIK--YVM 286

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYA------RRRHVSGGILIDQPVMK-----RAIADIAL 364
             ++ A + +      L+EA +         RR     I+   PV +     RA AD + 
Sbjct: 287 SLMNGARLGIIAQSTGLSEAAYREAYAYALERRQFGKAIIEFPPVYEMLSLIRAKADASR 346

Query: 365 DIAAATALSFRLANSFDE--------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIA 413
            +   TA    +  + ++         + R E   Y+++     P+ K    + A     
Sbjct: 347 AMLYETARFVDVYKALEDIARERQLTPEERQEMKKYSKLSDAFTPMGKGMASEFANQNTY 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           + ++  GGSGY+++ +  R  R++   +I  G+    V+  +  +  GT L +    T E
Sbjct: 407 DCIQIHGGSGYMKDYACERLTRDARITNIYEGTTQLQVIAAIRHVTTGTYLTQ--IRTYE 464

Query: 474 QDL 476
           Q++
Sbjct: 465 QEI 467


>gi|297203801|ref|ZP_06921198.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197711852|gb|EDY55886.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 12/260 (4%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
           S+   + +TE   G+D+  I +  ++  D  + L+G K F+S+ + +D  I++A+     
Sbjct: 119 SLITAIAMTEPGAGSDLQGIRTHAEERGD-HWVLNGSKTFISNGIIADLVIVVARTTPEG 177

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
           G   +  L+ +    G    R  +KIG ++  T EL F +       LLG+ + + G + 
Sbjct: 178 GARGLSLLVVERGTAGFERGRNLDKIGQKAQDTSELFFHDVRVPKENLLGERDGAFGHLM 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A+ +++     L     Y + R   G  L  +  ++  IA++A + A   
Sbjct: 238 TNLAQERLSIAVSAIAAAEHLLEITTEYVKGREAFGRPLATKQHIRFEIAEMATECAVTR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                     D       +     + A + K+W  ++   V    ++  GG GY+ E  +
Sbjct: 298 TF-------VDRCVEDHSDGGLDAVHAFMAKWWATELQKRVADRCLQLHGGYGYMSEYPV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR + +    +I  G+   M
Sbjct: 351 ARAFTDGRIQTIYGGTTEIM 370


>gi|262195839|ref|YP_003267048.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079186|gb|ACY15155.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 431

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 201 GLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258
           G+TE   G+D   A+ +      DG Y L+G K F++ +P +D  ++ A+++   G  L 
Sbjct: 166 GMTEPGAGSDAFRAMRTVAVPEGDG-YILNGQKTFITNAPYADVLVVYAKIDRGDGIPLA 224

Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
            R     +LE   P GL   R   K+G  ++ T E+  ++       LLG    + G   
Sbjct: 225 ERAIEAFVLERDDP-GLSLSRPMRKMGMHASPTGEIFLADCRVPGDRLLGMHERAQGRAS 283

Query: 311 DMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
              +     +++  M V  +   L  A  YAR R   G  +    +++  +A + + +  
Sbjct: 284 GRDVFHAERTSMAPMCVGIIERCLEIASEYARERVTWGRPIAGYQLVQDKLARMFMHLQN 343

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             AL F+      +   RS++ + +   A  TK +  + A     EA++ +GG+GY+ E 
Sbjct: 344 VEALMFK------QLWLRSQKRSMSPAEASATKLYAARAATECALEAIQLLGGNGYMREY 397

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            +    R++    I  G+     L++
Sbjct: 398 RVEMLMRDAKLLQIGGGTDEIQTLNI 423


>gi|163733856|ref|ZP_02141298.1| isobutyryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392967|gb|EDQ17294.1| isobutyryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 587

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 47/304 (15%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P++ S E  PT          A+    TE   G
Sbjct: 283 GSLGTRSEIAAELIIAGGTEAQKEKWLPRLASAETLPT----------AV---FTEPNTG 329

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  +  Y ++G+K W   +  ++   +LA+ +        +  FL  + 
Sbjct: 330 SDLGSLRTRAVKDGEN-YSITGNKTWITHATRTNVMTLLARTDPDTTDYRGLSMFLAEKT 388

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
             +D +P   +G+    ++  +G R     EL F N   F +   N+  G  E+ K    
Sbjct: 389 PGDDENPFPTDGMTGGEIE-VLGYRGMKEYELAFDN---FEVKGENLLGG--EEGKGFKQ 442

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++   +SA +  +   V +A+     A+ YA+ R   G  LI+ P +   +A +A++I  
Sbjct: 443 LMETFESARIQTAARAVGVAQSALDIAMQYAQDRKQFGKSLIEFPRVSGKLAMMAVEIMI 502

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E 
Sbjct: 503 ARQLTYFSAFEKDEGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEY 555

Query: 429 SIAR 432
            I+R
Sbjct: 556 KISR 559


>gi|58269680|ref|XP_571996.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57228232|gb|AAW44689.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 426

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 13/104 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D +++ +   K SDG + L+G K W  ++P++D F++ A
Sbjct: 154 PQLATGEIIGCFGLTEPNHGSDPSSMETTATKTSDG-WVLNGSKTWISNAPVADLFVIWA 212

Query: 248 QV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +V     +G+V  FLV    E G+  GL    +KNK+  R++ T
Sbjct: 213 RVVENGEKGKVRGFLV----EKGTA-GLSAPAIKNKMSLRASIT 251


>gi|91780473|ref|YP_555680.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693133|gb|ABE36330.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 436

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 27/278 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
             +TE   G+D  A+ ++ +K   G + L+G K F+++   +D  I  A +  ++G + +
Sbjct: 136 FAITEPDYGSDATAMRTRARKTGRG-WVLNGTKCFITNGARADCVITFATINSQMGRYGI 194

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL--GDL----NVSTGPV 309
              L D +  G    R++   G R+     L +++   T   LL  GD     +  +G  
Sbjct: 195 RAFLVDCNTPGFTVSRIERMAGLRATQLAALSYADCELTDDALLARGDEKPLDDAFSGAQ 254

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ----PVMKRAIADIALD 365
                   L SA+M V   R   A+ + +      +GG   D+      ++ ++ DI   
Sbjct: 255 RSWDYFRPLLSAVM-VGACRRVRADLVAWLD----AGGTPADRHRSVASVEASLLDIDRQ 309

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IAAA  L    A   D   + S +++       +TK +  +MA  V   AM+  G  G  
Sbjct: 310 IAAAWLLCHCTAWKADRGAATSMDSS-------MTKAFASRMAARVTRAAMDLAGIDGIT 362

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
              S+ + YR++ A  I+ G+G+   L +    ++ T+
Sbjct: 363 AFPSLEQAYRDAKAFDIMEGTGDLQRLMIARAAQRSTS 400


>gi|325962757|ref|YP_004240663.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468844|gb|ADX72529.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 396

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P I++          M+K       GLTE  GG+D+A  T    +     + L+G K 
Sbjct: 125 WLPDIYA----------MKKIGA---FGLTEPLGGSDVAGGTRTTARREGDTWILNGEKR 171

Query: 233 WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           W  ++  SD  ++ A+   + +V  FLV     D + +G    +++NK   R+    ++ 
Sbjct: 172 WIGNATFSDWVVIYAKDVDDNQVKGFLV-----DTALDGFSAVKIENKTALRTVQNADIT 226

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
             N        L  +    +  K+L    L  A  +V     +   A  YA  RH  G  
Sbjct: 227 LRNVAVPDFQKLAHANSFRDVNKVLKVTRLGVAWQAVGQQLAAFDVARRYAVERHQFGRP 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    +++  +  I  +  ++  +  RL+   D  +++ E++A A+       +   +M 
Sbjct: 287 LASFQLVQNQLVQILGNAVSSMGMMVRLSQLEDAGQAKDEQSALAK------AFTTTRMR 340

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +V A     +GG+G + +  +A+ + ++ A
Sbjct: 341 ESV-ALGRNILGGNGIVTDFGMAKIFADAEA 370


>gi|260431320|ref|ZP_05785291.1| long-chain specific acyl-coa dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415148|gb|EEX08407.1| long-chain specific acyl-coa dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 349

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 29/257 (11%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W PK+ S E             +   L +TE   G+D+ AI +  +K  +  Y ++G
Sbjct: 111 KRKWLPKLASGE-------------MVGALAMTEPSTGSDVQAIRTTAEKDGNS-YRMNG 156

Query: 231 HKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I+ A+ +  +G   V  + +E     G    R   K+G ++N T E
Sbjct: 157 SKIFITNGQTADLIIVAAKTDKSLGAKGVSLIAVETEGAEGFRRGRNLKKLGMKANDTAE 216

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F +       LLG      G  + MK L +  L   IM++  +  ++AE + Y + R 
Sbjct: 217 LFFEDVKVPMTNLLGS-EEGQGFYQLMKQLPWERLTIGIMALGAIDFAIAETVKYTQERK 275

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  ++D         +    +A     +  L +  ++  ++ E        A + KYW
Sbjct: 276 AFGQRVMD-------FQNTRFKLAECKTKAEVLRSFVNDCIAKLEAGQLDAATASMVKYW 328

Query: 404 CCKMAPAVIAEAMECIG 420
             ++   ++ E ++  G
Sbjct: 329 GSEVQNEIMHECLQLFG 345


>gi|297194020|ref|ZP_06911418.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722830|gb|EDY66738.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  Y L+G K W  ++ +S+ + ++A 
Sbjct: 119 PLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FYVLNGVKRWITNAGVSEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + +    G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 178 TDPEKRSKGISAFVVEKGDEGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + +   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIAEFQGVQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L++  A     AKS   +A          K +   +A  V  +A++ +G
Sbjct: 293 DMAMKIEAARQLTYAAA-----AKSERGDADLT-FQGAAAKCFASDVAMEVTTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|13471277|ref|NP_102846.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14022021|dbj|BAB48632.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 388

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  K S G Y L+G K F+S    SD + ++ +  G  G   +  
Sbjct: 133 LTEPGSGSDAAALKTRAVK-SGGDYVLNGAKQFISGAGDSDVYAVMVRT-GADGPKGIST 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
           ++      GL +   ++K+G    +T ++ F +     +   N+ +G      I +    
Sbjct: 191 IVVPKDAPGLSFGANEHKMGWHMQSTRQVIFEDC---KVPAENLLSGEGAGFGIAMAGLD 247

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD+  ++ AA    +
Sbjct: 248 GGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAARIFLY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A+  D       +A  A   + + K +       V   A++ +GG GY+ +  I +  
Sbjct: 308 AAASKLDR------KAPDAGKWSAMAKRFVTDTGFNVANNALQLLGGYGYLHDYGIEKLV 361

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 362 RDLRVHQILEGTNEIM 377


>gi|134113889|ref|XP_774192.1| hypothetical protein CNBG1740 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256827|gb|EAL19545.1| hypothetical protein CNBG1740 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 426

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 13/104 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D +++ +   K SDG + L+G K W  ++P++D F++ A
Sbjct: 154 PQLATGEIIGCFGLTEPNHGSDPSSMETTATKTSDG-WVLNGSKTWISNAPVADLFVIWA 212

Query: 248 QV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +V     +G+V  FLV    E G+  GL    +KNK+  R++ T
Sbjct: 213 RVVENGEKGKVRGFLV----EKGTA-GLSAPAIKNKMSLRASIT 251


>gi|328470881|gb|EGF41792.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 389

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 34/262 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D I+ L+G+K W  + P +  +++ A+ +       +
Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R    G P     Q+L +K+G R + T EL F N       +LG  N      +
Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGQEN------Q 237

Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
            +K+L+  LD   + ++G  + + +A     + Y   R   G  +    +++  IAD+  
Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGQFQLVQAKIADMYT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA A  + +A + D  ++  +++A A +       +  ++A  +  +A++ +GG+GY
Sbjct: 298 QMNAAKAYVYAVAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350

Query: 425 IEERSIARHYRESPANSILLGS 446
           I E    R  R++    I  G+
Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372


>gi|240168426|ref|ZP_04747085.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium kansasii ATCC 12478]
          Length = 388

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 26/283 (9%)

Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           +F  E   T   P M    +   + LTE  GG+D+ ++++       G   ++G K W  
Sbjct: 102 LFGTEEQKTAYLPAMATGELRATMALTEPGGGSDLQSMSTTALVSEAGGLRINGAKTWIT 161

Query: 236 SSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           ++  S    +L + +        G  +V  L++ G   GL   R   K+G +   + EL 
Sbjct: 162 NARRSGLIALLCKTDPAARPRHKGISIV--LVQPGP--GLTVSRDLPKLGYKGVESCELS 217

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F +       +LG   +  G  + MK L    +  A  ++     +L +A+ YA++R   
Sbjct: 218 FDDYRVPVSAVLGS-RMGEGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A        
Sbjct: 277 GQPIWKHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA-------S 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           ++A  +   A+   GG GY  E  + R++R++P   +++G G 
Sbjct: 330 EVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 370


>gi|296216692|ref|XP_002754679.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 415

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256
           LTE   G+D A++ +  ++  D  Y L+G K F+S +  SD ++++ +  G     + C 
Sbjct: 160 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGAGESDIYVVMCRTGGSGPKGISCI 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNV 304
           +V    E G+P GL + + + K+G  S  T  + F            S   GFL+    +
Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPMANRIGSEGQGFLIAMKGL 273

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G +         + A  S+     S+     +   R   G  L     ++  +AD+A 
Sbjct: 274 NGGRI---------NIASCSLGAAHASIILTRDHLNVRKQFGEPLASSQYLQFKLADMAT 324

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+  L  R     + A +  ++   A  +  + K +      A+  +A++  GG GY
Sbjct: 325 RLVASR-LMIR-----NAAVALQDDRKDAVALCSMAKLFATDECFAICNQALQMHGGYGY 378

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           +++ +I ++ R+S  + IL GS   M
Sbjct: 379 LKDYAIQQYVRDSRVHQILEGSNEVM 404


>gi|255318963|ref|ZP_05360188.1| putative acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378301|ref|ZP_06071458.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255303980|gb|EET83172.1| putative acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299586|gb|EEY87498.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 430

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 18/224 (8%)

Query: 221 ISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + ++G K   L    +D  ++ A   G+   F+  R       + + Y++    +
Sbjct: 218 FKDQQFYITGEKTLVLLGETADLLLVSADYNGQADVFVAIR------DSTISYKKCP-AM 270

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G ++  TV L+F+ T    LGD +       D+  L++   AI +   ++      + YA
Sbjct: 271 GLKACETVTLKFNQTPAERLGDEDFDYSAFLDLGQLMWCALAIGTCEAVK---NYCVRYA 327

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +  +  +   IAD+ ++I A   + +  A+  +  +    EA  A+++   
Sbjct: 328 NERMAFGEPISHRQSIAFIIADMTIEIEAMRMMLWNAASLAEAGEPFHREAYLAKLL--- 384

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               C + +  +  + ++ +GG G+ +E  + R YR+  A +IL
Sbjct: 385 ----CAEKSMKIGTDGVQILGGHGFTKEYPVERWYRDLRATAIL 424


>gi|33599609|ref|NP_887169.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567205|emb|CAE31119.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV+ R
Sbjct: 123 MGVTEPTTGSDTTKLKTTAVK-KDGRWVINGQKVWISRVQHSDLLILLARTTPVEQVQKR 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 182 SDGLSCFIVE--LDKAIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGAEGKGLKVI 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R V G  +     ++  +A+  ++
Sbjct: 240 FEGLNAERTLI----AAECIGDGYWFLEKARDYANERKVFGRPIGQNQGIQFPLAECFIE 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + ++  +  D  ++       A + A + KY   K +       ++  GG G+ 
Sbjct: 296 LEAANLMRWQACSKIDARQN-------AGVEANMAKYLAAKASWEAANACLQTHGGFGFA 348

Query: 426 EERSIARHYRES 437
            E  + R +RE+
Sbjct: 349 CEYDVERKFRET 360


>gi|260219462|emb|CBA26307.1| hypothetical protein Csp_E33950 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 629

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/370 (20%), Positives = 154/370 (41%), Gaps = 73/370 (19%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +A+++    T    + +A K FS ++  T             + L+E + G+ ++ +
Sbjct: 144 SVGNANLLMAHGTELQKQVFAHKEFSGQWSGT-------------MCLSEPQAGSSLSDV 190

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQV---EGR------ 252
            ++     +G         Y L G+K ++SS   +       ++LA++   +G+      
Sbjct: 191 ATRAVPDGEGFESDPLGARYRLRGNKMWISSGEHELTENIVHLVLAKIPNADGKLVPGTR 250

Query: 253 -VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295
            +  F+VP+ + +      G  N +    L +K+G R      L F          +   
Sbjct: 251 GISLFIVPKKMVNAQGELTGVRNDVALAGLNHKLGWRGTTNTLLNFGEGKFPLDGQAGAV 310

Query: 296 GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---- 347
           G+L+G     L      + + +I + + + ++ ++G   SL  A +  + R ++G     
Sbjct: 311 GYLVGQPGKGLACMFHMMNEARIGVGIAATMLGMAGYYASLDYAKNRPQGRPITGAGKDA 370

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR----IMA 397
                 +I+   +KR +         A AL    A   DE  +  +++A  AR    ++ 
Sbjct: 371 AAPQTRIIEHADVKRMLLTQKAYCEGALALELYCARLIDEQHTGTAQDAEEARLLLEVLT 430

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K W  +      + A++  GG GY  +  + +++R++  N I  G+     +D+L  
Sbjct: 431 PIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGR 490

Query: 457 --LLEKGTNL 464
             L+E+G  L
Sbjct: 491 KVLMEEGKGL 500


>gi|288932664|ref|YP_003436724.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894912|gb|ADC66449.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 34/316 (10%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           SA++ A  +T      +  K  S E       P  K      + +TE   G+D+ +IT+ 
Sbjct: 86  SATIQAFQST-----HFIAKFGSEELKEEYLVPAIKGEKIGAICMTEPNAGSDLGSITTT 140

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ------VEGRVGCFLVPRLLEDGSPNGL 270
             K  D  Y ++G K W  +  ++D + + A+      +EG +  FLVPR  E     G+
Sbjct: 141 AVKDGDE-YVINGVKTWVTNGSIADFYTVAARTSKGKGMEG-IDFFLVPRKAE-----GV 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSV 325
              R  +K+G R   T E+ F++       LLG+     G +   +IL  I + +  +S+
Sbjct: 194 EVGREIDKMGLRGLKTSEVVFNDVRIPADHLLGEKE-GMGHIYLREILAEIRVSTGALSL 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 + +AI YA+ R   G  +     ++  IA+ A ++ AA  L +  A   D+ + 
Sbjct: 253 GAGSAVIKDAIEYAKERVQFGKPIGKFQAVRLMIAEAATELEAAKWLVYHAAWLIDKGRK 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +EA+ A++ A         +A  V A         G+ ++ ++ R YR+     +++G
Sbjct: 313 PIKEASMAKLFASEAAVKAVDIASRVFAS-------YGFSKDHAVERFYRD--VRFLIIG 363

Query: 446 SGNAMVLDVLNLLEKG 461
            G + +L ++   E G
Sbjct: 364 GGTSEILKLIIASELG 379


>gi|145225092|ref|YP_001135770.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217578|gb|ABP46982.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 402

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 19/251 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHK-WFLSSPMSDAFI 244
           P   +  AIG  GLTE   G++ A + ++G++   G    + L+G K W  +  ++D   
Sbjct: 131 PRLASGDAIGCFGLTEPDFGSNPAGMRTRGKRDGSGENADWILNGTKMWITNGNLADVAT 190

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + AQ +  +  FLVP      +P G     +  K+  R++ T EL   N        L  
Sbjct: 191 VWAQTDEGIRGFLVP----TDTP-GFTANAIHRKLSLRASITSELVLDNVRLPASAQLPE 245

Query: 305 STGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + G    +  L      I+  ++   R SL   I Y + R V    L    + +  +A++
Sbjct: 246 AVGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQTREVFDRPLAGYQLTQEKLANM 305

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +++     L+  L    D    R E+ +  ++          + A A+  E    +GGS
Sbjct: 306 TVELGKGMLLAIHLGRIKDAEGVRPEQVSLGKLNN-------VREAIAIARECRTLLGGS 358

Query: 423 GYIEERSIARH 433
           G   E S  RH
Sbjct: 359 GITLEYSPLRH 369


>gi|319442423|ref|ZP_07991579.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 401

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 45/271 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE + G+D AA+ +  ++  D  Y L+G K F+++    D  ++ A ++   G    
Sbjct: 131 MAITEPQFGSDSAAVATTAKEDGDD-YILNGEKIFVTAGERCDHVVVWASLDKSAGRAAI 189

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----P 308
             FLVPR     +P G    RL++K+G RS        S+T  F+L ++ V        P
Sbjct: 190 KSFLVPR----DTP-GFDLVRLEHKLGIRS--------SDTAHFILDNVRVPKANLLGTP 236

Query: 309 VEDMK-----ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPVMKRAIA 360
             D K      +   D+    V+GM + +A A +   R      G+ ID   P   +  A
Sbjct: 237 EIDTKKSFAGAMATFDNTRPLVAGMAIGVARASLEKLREILTEAGVEIDYDAPAWNQTAA 296

Query: 361 -----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                 +  D  AA  L+ + A   D  +  ++EA+  +  A        +MA  +   A
Sbjct: 297 ASEYIRLEADWEAAYLLTLKAAWMADNKQPNNKEASECKAKA-------GRMATELTLRA 349

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E  G  GY E   + +  R+S    I  G+
Sbjct: 350 VELAGSFGYSERSLLEKWARDSKILDIFEGT 380


>gi|51892391|ref|YP_075082.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856080|dbj|BAD40238.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 387

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 22/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVP 259
           L+E   G+D  AI ++  +  D  Y + G K W   +  +D F++ A+    V G     
Sbjct: 124 LSEPDAGSDAQAIRTRAVRKGD-RYVIQGTKSWISGAGAADFFVVAAKTRTDVPGARGFS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + D    G+   R ++K+G R     ++ F +       L+G  N      E  K+++
Sbjct: 183 VFVVDRDTPGVTVGRKEHKMGVRGLPVHQVIFEDVEVPVSSLVGQEN------EGFKLIM 236

Query: 317 YLDSAIMSVSGMR-VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +A+  V   R + LAE      + YAR R   G  LI+   ++   A++A +I A  
Sbjct: 237 QNLNAVRPVVAARGLGLAEGALMYWLEYARTRQTFGRPLIEHQGLQWMAAELAAEIEACR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A+  D+ +    EAA+   MA   K    ++A     + ++ +G  GY+E+  +
Sbjct: 297 LLTYRAASLVDQGRV-GREAAHFLSMA---KLKATELAVKAANDCLQMMGAVGYMEDYPM 352

Query: 431 ARHYRESPANSILLGS 446
           AR  R++   +I+ G+
Sbjct: 353 ARFVRDARQLTIVEGT 368


>gi|118404420|ref|NP_001072710.1| acyl-CoA dehydrogenase (3J649) [Xenopus (Silurana) tropicalis]
 gi|115312996|gb|AAI24059.1| acyl-CoA dehydrogenase (3J649) [Xenopus (Silurana) tropicalis]
          Length = 422

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 20/270 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P     V   LG++E   G+D+A+I +   K  D  Y ++G K W  +   +D   +LA 
Sbjct: 151 PTIAGDVVTCLGVSEAGAGSDVASIKTTAVKKGDD-YIINGSKMWTTNGCQADWMCLLAN 209

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
                       +       G+   +   KIG +S+ T ++ F +      +L+G+    
Sbjct: 210 TSAGPPHKNKSLICLPMKTPGVQVTKKIEKIGMKSSDTAQIFFEDVRVPSKYLIGE---- 265

Query: 306 TGPVEDMKILIYLDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            G     ++L + +  +  V+     M   L E I Y  +R V    ++   V+   +A+
Sbjct: 266 EGMGFTYQMLQFQEERMWGVANVLTPMGNILQETIDYTSQRKVFNQPVLHNQVVHFRLAE 325

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A ++    +L +R    + E    ++ A+ A++ A        ++A  +    ++  GG
Sbjct: 326 LATEVELLRSLLYRSVAMYVEGNDVTKLASMAKLKA-------GRLARELSDSCLQFWGG 378

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV 451
            G+ +E  ++R YR+S   SI  G+   M+
Sbjct: 379 MGFTDEVLVSRFYRDSRLLSIGAGADEVML 408


>gi|90577556|ref|ZP_01233367.1| putative acyl-CoA dehydrogenase [Vibrio angustum S14]
 gi|90440642|gb|EAS65822.1| putative acyl-CoA dehydrogenase [Vibrio angustum S14]
          Length = 386

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 25/282 (8%)

Query: 175 APKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A +IF    D   +   P   T   IG L ++E   G+D+ ++  + +   D  + L+G+
Sbjct: 102 ANQIFRNGNDAQKQQYLPALITGEHIGALAMSEVNAGSDVMSMQLKAEDHGDH-FVLNGN 160

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K W  + P ++  ++ A    R     +   + +   +G    +  NK+G R + T EL 
Sbjct: 161 KMWITNGPEANTLVVYA----RTSSNAITAFIIESQFDGFSTAQKLNKLGMRGSNTCELV 216

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
           F N     +   NV        K+L+  LD   + ++   + +A++     I Y   R  
Sbjct: 217 FINC---KVPKQNVLGEVDHGAKVLMSGLDFERVVLAAGPLGIAQSCLDVVIPYIHERKQ 273

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  IAD+   + AA +  + +A + D  +   ++AA   +++       
Sbjct: 274 FGKAIGEFELIQAKIADMYTQLNAARSYVYTVAKACDRGEVTRKDAAGVILLS------- 326

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++A  +  E ++ +GG+GYI +    R  R++    I  G+
Sbjct: 327 AELATKMALETIQILGGNGYINDYPAGRLLRDAKLYEIGAGT 368


>gi|269836852|ref|YP_003319080.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786115|gb|ACZ38258.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 403

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 22/266 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  K       GLTE   G+D   I ++  +  D  Y L+G K W   +  +D F++ A 
Sbjct: 113 PQAKGEKLATFGLTEPGAGSDAGNIQTRAVRDGD-YYILNGEKMWISLANTADHFLVFAT 171

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300
           ++  +    L+  ++E G   GL    +K K+G R+  T  + F N         G    
Sbjct: 172 LDPSKKHHGLIALVVERGM-EGLTTGSIKGKLGVRAGDTGWINFQNVRVPVENRIGEEGE 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++   ++  +  +    A  +V  +R +   +I Y   R   G  +    ++++ IA
Sbjct: 231 GFKIAMSAIDQGRFTV----AAGAVGLIRAAKEASIKYCHEREAFGEPIGKFQLVQQMIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++     A+  L  R A   +     + E + A       K++ C  A     +A++  G
Sbjct: 287 NMVAGEEASRLLVMRAAELKNRGIRNTRETSLA-------KWFACDRAFEAANDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY  E  + R+ R +    I  G+
Sbjct: 340 AYGYSNEYPVERYMRNARGAVIYEGT 365


>gi|323486813|ref|ZP_08092131.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
 gi|323399826|gb|EGA92206.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
          Length = 367

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 19/241 (7%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG 254
           G+G   LTE   G+D  AI ++  K  DG Y ++G K F++ +P +D +++ A+ E   G
Sbjct: 135 GMGSFCLTEPDAGSDAGAIRTKAVK-KDGEYIITGRKCFITNAPHADFYVVFAKTEPDAG 193

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVED 311
              +   L +    GL   + ++K+G R + T ++   E       LLG      G    
Sbjct: 194 TKGISAFLVERGREGLSIGKHEDKMGIRLSTTADVILEEVHVPEDHLLG--AEGKGFKLA 251

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L    L+ A M+    + ++  ++ YA+ R   G  +     ++  +AD+ +   AA
Sbjct: 252 MQTLDRTRLECAAMAAGLSQRAIDLSVDYAKTRVTFGKPIAKLQAIQFMLADMEIRNQAA 311

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +L ++ A   D         A    M  + K +  + A     +A++   G GY  E  
Sbjct: 312 RSLVYQCAAMID-------SGAVDGKMNAVAKTFSSEAAMQNTLDAVQIFSGYGYSREYE 364

Query: 430 I 430
           +
Sbjct: 365 V 365


>gi|193076815|gb|ABO11538.2| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y
Sbjct: 102 TEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHY 147

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+ + +D  +++A+ + +     +  LL D + +G+       KIG  +  
Sbjct: 148 RINGSKTFISNGLHADLIVLVAKTDSQAKAKGISILLVDAALDGVKKGPSLQKIGLHAQD 207

Query: 286 TVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           T EL F +               F +L+ +L     P E + I      ++M++  +  +
Sbjct: 208 TAELFFDDVCVLATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGAILGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  +  Y   R   G  L      +  +A+  +   AA A   + A  + + +    + A
Sbjct: 257 IELSKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVA 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +    IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 317 ALKCF--ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|291398674|ref|XP_002715957.1| PREDICTED: medium-chain acyl-CoA dehydrogenase [Oryctolagus
           cuniculus]
          Length = 421

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPGTGSDVAGIKTRAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GVQIGRKELNMGQRCSDTRGIVFEDV---RVPKENVLLGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 275 GAFDKTRPTVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAVSFLLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  V  +A++  GG+G+  E  +
Sbjct: 335 MSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQVATDAVQIFGGNGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|316305565|gb|ADU56239.1| acyl-CoA dehydrogenase [Streptomyces kanamyceticus]
          Length = 386

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 24/262 (9%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+++A I++  ++  +G+  L G K F +S     F+++           +   +
Sbjct: 119 SEHEAGSELAKISTVVRRDGEGL-VLDGTKAFSTSTDFAQFLVVIARSAENPTRYLAVAV 177

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---MKIL-IYL 318
           E  +P GL   +  + IG R++AT ++ FS        D +V  G   D   +++L I L
Sbjct: 178 ERDAP-GLRIDKRWDVIGLRASATYQVSFS--------DCHVPAGNALDGHGLRLLEIGL 228

Query: 319 DSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +++ + ++   + +A  I      YA+ + + G  L++  V    +    + I       
Sbjct: 229 NASRILIAATALGVARRIRDLCMEYAKTKSLKGAPLVNDAVFAGRLGQFEMQIEVMANQC 288

Query: 374 FRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              A ++D   +R + A       A+  A   K +C + A  + + A E  GG GY  + 
Sbjct: 289 LAAARTYDATAARPDAARTLLRQGAQKSALTAKMFCGQTAWQIASTASEMFGGIGYTHDV 348

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I +  R+    SI+ G  + +
Sbjct: 349 PIGKLLRDVRHASIIEGGDDVL 370


>gi|294853235|ref|ZP_06793907.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294818890|gb|EFG35890.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 211

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDS 320
           +P GL   +   K+G +   T ++ F N       L+G +    G    MK+L    L  
Sbjct: 16  TPPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHI 74

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   
Sbjct: 75  AALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKR 134

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           D  ++ S EA+ A++ A        +M   V    ++  GG+GY+ E +I R YR+
Sbjct: 135 DSGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 183


>gi|226363157|ref|YP_002780939.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241646|dbj|BAH51994.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 422

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 37/271 (13%)

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A++++     DG       +W  +S ++   ++LA+    +  F+VP      S  G+  
Sbjct: 171 AVSTEAIPDGDGWILRGRKRWITNSVVAGVVVVLARTGDTLTTFIVPT-----SAAGVTI 225

Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
                K+GNR   T ++   +         G + G L ++      ++ L Y     + +
Sbjct: 226 GTPDRKLGNRGQITADVHLDDVRLGPESVLGRVGGGLRIA------LQTLTY---GRIGI 276

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+A     + + + R   GG L  +   +  +AD A D+ AA +L  + A   
Sbjct: 277 GAAGVGMAQAAFDRTVAHLKSRQAFGGSLASKQHWQFVMADYAADLEAARSLYLKAALRL 336

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  +   E EAA A++           +A  +  +A++  GG G++  RS+     E P 
Sbjct: 337 DAGERFPEPEAAMAKLRG-------TDLAARIARDAVQAFGGLGFV--RSLGADDTEGPV 387

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
            +I   S    + +  N +++   L  Q+F 
Sbjct: 388 EAIYRDSKIGEIYEGANEIQRWV-LARQIFG 417


>gi|111019618|ref|YP_702590.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819148|gb|ABG94432.1| probable long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii
           RHA1]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 116/299 (38%), Gaps = 44/299 (14%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           MTT      W P   + E               +G+ +TE   G+D+  I +   +  D 
Sbjct: 103 MTTEEQKARWLPGTVTGE-------------TILGIAMTEPGTGSDLTGIRTTAVRDGDH 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            Y ++G K F+S+  +    ++A     +   G  L+  ++E  +P G    R   KIG 
Sbjct: 150 -YVVNGSKTFISNGQNGTLFVVAVRTSADKHKGLSLL--VVESDTP-GFSRGRNLEKIGL 205

Query: 282 RSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +  T EL F++       LLG+        V   P E + +      ++ +VS     L
Sbjct: 206 HAQDTSELTFTDMRVPVANLLGEEGQGFYQLVHNLPQERLSL------SVGAVSAAEGVL 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAA 391
            + + Y + R   G     +P+         L   A  A    LA ++ D+   +     
Sbjct: 260 EQTLEYVKERSAFG-----KPIAGFQNTQFVL---AELATELDLARTYLDDCIRQHVRGE 311

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                A   K+W  ++   V    ++  GG GY+ E ++AR + +S   +I  G+   M
Sbjct: 312 LTPARAARLKWWTTELQVRVADRCLQLHGGYGYMREYAVARAFVDSRIQTIYGGTTEIM 370


>gi|325118829|emb|CBZ54381.1| putative 2-methylbutyryl-CoA dehydrogenase [Neospora caninum
           Liverpool]
          Length = 379

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 143/329 (43%), Gaps = 35/329 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S+ AL+       + A  ++  +       P   +S+     L+E   G+D  A+ +  +
Sbjct: 52  SVAALVDIHNTLINRALTLYGTDEQKEKYLPQLASSMLGSFCLSESESGSDAFALKATAR 111

Query: 220 KISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +  +G  + L+G K W  ++  +  F++ A  +   G   +   L +    GL       
Sbjct: 112 RSENGDAWVLNGSKQWISTAREAGLFVVFASYDLDQGYRGITAFLVEAGTAGLDVGPPLE 171

Query: 278 KIGNRSNATVELEFSNTF-----------------GFLLGDLNVST--GPV-EDMKILI- 316
           K+G ++++T E+  ++                   GF    ++ S   G V E  KI I 
Sbjct: 172 KLGIKASSTCEVVLNDVQACMHVAIMTLKNADKIQGFFYIQVHDSCVLGEVGEGYKIAIR 231

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + ++   + LA+     A+ Y   R   G  + D   ++   A +A +I AA  
Sbjct: 232 LLNEGRIGIAAQMLGLAKGAFEMAMTYMHDRQQFGKRIADFQGVRFEYAKLATEIEAAAL 291

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A   +  +  +++AA A++ A        ++A +V    ++ +GG+G+ +E  +A
Sbjct: 292 LTYNAALLREAGEPFAKQAAMAKLKAS-------QVAQSVTGACIDFVGGNGFTKEFGLA 344

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +R+S   +I  G+ N  +  +  +L++
Sbjct: 345 KLFRDSKIGTIYEGTSNMQLETIAKVLQR 373


>gi|226362235|ref|YP_002780013.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240720|dbj|BAH51068.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 387

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 58/283 (20%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
            REY P     +    + +  G+TE   G D + I ++  KI+ G + ++G K F+++  
Sbjct: 108 KREYLPK----LASGEMLMAFGVTEPTAGVDTSRIKTKATKINGG-WVINGQKVFITNAK 162

Query: 240 -SDAFIMLAQVEGRV------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--- 289
            +   ++LA+   R       G  L      +  P  +  + + +K+G  +  T EL   
Sbjct: 163 NAQRILLLARTSPRRDDKPLHGMTL---FFANMDPERITIREI-DKLGRAAIDTNELFID 218

Query: 290 -----------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                      E    F +LL  LN         +I +    A+  +   R +L  A +Y
Sbjct: 219 NLEVADHEVVGEVDKGFYYLLDGLNPE-------RICV----AMEGIGLGRAALDLATNY 267

Query: 339 ARRRHVSGGILIDQPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  R     I+ D+P+ K       +AD  + + AA  ++ + A+ FD  +    EAA A
Sbjct: 268 ANER-----IVFDRPIGKNQAVAHPLADSWIRLEAAEGMAMKAADLFDAKQPCGAEAAAA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + +     +  C         A    GG  Y +E  I R +RE
Sbjct: 323 KYLGAEAGFDACD-------RAFSTFGGYAYAKEYHIERLWRE 358


>gi|83593340|ref|YP_427092.1| glutaryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576254|gb|ABC22805.1| Glutaryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 395

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255
            GLTE   G+D  ++ ++  K + G Y L+G K W  +SP++D  ++ A+ E    ++  
Sbjct: 137 FGLTEPDHGSDPGSMKTRATKTAGG-YRLNGAKMWITNSPIADLAVVWAKSEAHDDKIRG 195

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLV R ++     G    +++ K   R++ T E+   +        L ++ G        
Sbjct: 196 FLVERGMK-----GFSTPKIEGKFSLRASLTGEIVLDDCVVPEANLLPLAEGLAGPFGC- 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370
             L+ A   +S   +  AE   +A R++    +   +P     ++++ +AD+  +I    
Sbjct: 250 --LNKARYGISWGAMGAAEFCWHAARQYTLDRLQFGRPLAATQLIQKKLADMQTEITLGL 307

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             S R+    DE K+R E  +       + K      A  +   A +  GG+G  +E  +
Sbjct: 308 LGSLRVGRLLDEGKARPEAIS-------LVKRNNAGKALDIARVARDMHGGNGIADEFHV 360

Query: 431 ARH 433
            RH
Sbjct: 361 IRH 363


>gi|127513603|ref|YP_001094800.1| crotonobetainyl-CoA dehydrogenase [Shewanella loihica PV-4]
 gi|126638898|gb|ABO24541.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 378

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 109/258 (42%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +  ++ +  +Y L+G K F++S     ++++   +      +    
Sbjct: 123 ITEPSAGSDVGSLLTTYKRRNGKVY-LTGSKCFITSAAGIPYVVVMAKDADSEKPIFTEW 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
             D +  G+   +L  K+G + ++  EL+F       S+ FG             +  + 
Sbjct: 182 FVDMTKPGIKLSKLP-KLGLKMDSCCELQFDEVELEESDMFGIEGNGFLRVKEEFDSERF 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +
Sbjct: 241 LV----ALTNYGAAYCAFEDAAKYANQRVQFGETIGRFQLIQDKFAHMAIKLNSMKNMVY 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D+    S ++A       + KY+C      VI  AM+ +GG     E  I+R +
Sbjct: 297 ETAWKCDQGTMTSGDSA-------MCKYFCANAGFEVIDSAMQVLGGYAIAGEHRISRMW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDIRVDRVSGGSDEMQIL 367


>gi|158315816|ref|YP_001508324.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111221|gb|ABW13418.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 399

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA++R   G  + D   +   +AD+A  + A   +    A   D  +    EA  A 
Sbjct: 275 AIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAARKKDSGQRNDVEAGMA- 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 KY   +    V  E+    GG GY +E  I R YRE+P   +L+G G + V
Sbjct: 334 ------KYLASEYCHEVTTESFRIHGGYGYSKEYEIERLYREAP--FMLIGEGTSEV 382


>gi|154686674|ref|YP_001421835.1| MmgC [Bacillus amyloliquefaciens FZB42]
 gi|154352525|gb|ABS74604.1| MmgC [Bacillus amyloliquefaciens FZB42]
          Length = 377

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 26/256 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFL 257
           LTE + G+D   + +   +   G Y L+G K F+++   +D ++  A  +   GR G  +
Sbjct: 123 LTEPQSGSDAGGLKTTAVR-KGGSYILNGSKIFITNGGAADLYLTFAITDPGKGRKG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310
              ++E  +P G    + + K+G   + TVEL+F        N  G      +++   ++
Sbjct: 180 SAFIVEKNTP-GFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLD 238

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +I I    A  ++  +  +L  ++ YA+ R   G  +     +   ++D+A +  A  
Sbjct: 239 VGRIGI----AAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATK 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +  A+ +       +EA+ A       K +    A     EA++  GG GY++E   
Sbjct: 295 LLVYHAADLYQRGLPCGKEASMA-------KQFASDAAMKAAVEAVQIHGGYGYMKEYPA 347

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 348 ERLFRDAKVTQIYEGT 363


>gi|302664232|ref|XP_003023750.1| hypothetical protein TRV_02137 [Trichophyton verrucosum HKI 0517]
 gi|291187760|gb|EFE43132.1| hypothetical protein TRV_02137 [Trichophyton verrucosum HKI 0517]
          Length = 427

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 52/292 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D  A+ ++ +K S G Y L+G K W  +S  +  FI+ A ++   G   +  
Sbjct: 151 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 209

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312
            + +    G    + + K+G R+++T  L F         D+ V   P E++        
Sbjct: 210 FVVEKDMPGFSIAKKEKKLGIRASSTCVLNFD--------DVEV---PKENLLGEEGQGY 258

Query: 313 KILI-YLDSAIMSVSGMRVSLA--------------EAIHYARR---------RHVSGGI 348
           K  I  L+   + ++     LA              E   ++           R   G +
Sbjct: 259 KYAISLLNEGRIGIAAQMTGLALGAWENAAGYFFSPELTTFSTNCDNSYIWNDRKQFGQL 318

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     M+  +A    +IAAA AL F  A   +  +   ++AA A++       +  ++A
Sbjct: 319 IGTFQGMQHQVAQSYTEIAAARALVFNAARKKEAGQDFVQDAAMAKL-------YASQVA 371

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 372 GRVSGLAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 423


>gi|256422338|ref|YP_003122991.1| glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
 gi|256037246|gb|ACU60790.1| Glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
          Length = 454

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 42/289 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L+ +    K+W P              MQ+       GLTE   G+  A   +   K 
Sbjct: 171 IYLLGSEEQKKEWLP-------------GMQRLEKIGAFGLTEPEVGSGAAGGLTTTAKR 217

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV----PRLLEDGSPNGLCYQR 274
               + L+G K W  ++  +D  ++ A+   +  V  FLV    P    +   + +  + 
Sbjct: 218 DGDTWILNGQKKWIGNATFADVLVIWARDVDDNEVKGFLVKKDTPGFSVEKMHDKMALRI 277

Query: 275 LKNKIGNRSNATVE----LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           ++N +    +  VE    L+ +N+F      L ++   V           A ++V   R 
Sbjct: 278 VQNGVITLKDCVVEEKDRLQHANSFKDTAKVLRMTRAGV-----------AWLAVGCARG 326

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y ++R   G  +    +++  + ++  ++ A   + +RL+   DE +   E A
Sbjct: 327 AYENALAYTQKRKQFGRPIGSFQLIQNHLVEMLSNLTAMQTMVYRLSELQDEGRLEDEHA 386

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           + A++       +C      +++ A E +GG+G + E ++AR   ++ A
Sbjct: 387 SIAKV-------FCSLRTRDIVSRAREVMGGNGILLEYNVARFVADAEA 428


>gi|312080484|ref|XP_003142619.1| acyl CoA DeHydrogenase family member [Loa loa]
 gi|307762220|gb|EFO21454.1| acyl CoA DeHydrogenase family member [Loa loa]
          Length = 419

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 33/267 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---- 250
           V  G  +TE   G+D++ I  + +K  D  Y L+G K W      +  F +LA+ +    
Sbjct: 147 VIAGYCVTEPSAGSDVSGIKMKAEKKGDS-YVLNGIKAWITGGGPAKWFFVLARTDPDPK 205

Query: 251 ---GRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLL 299
              G+    F+V     DG   G+   + +  +G R + T  + F        N  G L 
Sbjct: 206 VQPGKAFTAFIV-----DGDTKGISRGKKERNMGQRCSDTRTIIFEDVVVPMQNILGTLG 260

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++ G  +  +  +   +  +S      +L EA  YA  R   G  ++    +   +
Sbjct: 261 AGFKIAMGAFDMTRPAVAAGAVGLSWR----ALDEACKYALERKAFGAPIVANQGISFIL 316

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++  A  +++R A +       S +A ++   A + K +    A   ++ A++  
Sbjct: 317 ADMAANLELARLVTYRAAMAI------SNKACFS-YYASVAKCFAADSANIAVSNAVQIF 369

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G +G+ +E  + +  R++    I  G+
Sbjct: 370 GANGFNKEYPVEKLMRDAKIYQIYEGT 396


>gi|294912012|ref|XP_002778122.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239886243|gb|EER09917.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 433

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 24/279 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P  +    I L +TE   G+D+A I +  +   DG  Y ++G K W  +   SD F +  
Sbjct: 149 PCVRGEKNICLCITEPHAGSDVANIRTTAKLTPDGKHYIVNGQKKWITNGIFSDYFSVAV 208

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
           +  G     +   L+E G P GL   RL  + G  S+ T  +EF +       L+G  N 
Sbjct: 209 RTGGSGMKGISMLLVERGMP-GLKTTRLDCQ-GVLSSGTTFVEFDDVKVPVENLIGKEN- 265

Query: 305 STGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                +  K+++Y          I +V   R+    +  YA++R   G  L++ PV++  
Sbjct: 266 -----DGFKVIMYNFNHERWGLIIQAVRFSRILYELSFKYAQKRKTFGKTLMEHPVIRWK 320

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+++  I   +     + +            A    +A + K    K+      EA + 
Sbjct: 321 LAEMSRQIEGTSHWLESVTHQMSTMPWVESMDALGGTIA-LMKAHSTKVYEYCAREAAQI 379

Query: 419 IGGSGYIEE---RSIARHYRESPANSILLGSGNAMVLDV 454
            GG+ Y +      + R YR+  A +I  GS   ++LD+
Sbjct: 380 FGGNAYTKSGLGEVVERLYRDVRALAIPGGS-EEILLDL 417


>gi|169630697|ref|YP_001704346.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169242664|emb|CAM63692.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 387

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + ++G K W  +   S  + ++A  +       +  
Sbjct: 131 LSEREAGSDAASMRTRAKADGDD-WIINGSKCWITNGGKSSWYTVMAVTDPEKKANGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G     L++K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 190 FMVHKDDEGFTVGPLEHKLGIKGSPTAELYFENCR--IPGDRIIGEPGTGFKTALQTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    + +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 248 TRPTIGAQALGIAQGALDQAIAYTKDRKQFGKSISDFQGVQFMLADMAMKVEAARLMVYT 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I +  +K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 308 AA-----ARAERGEKNLGFI-SSASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMR 361

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 362 DAKITQIYEGT 372


>gi|120435399|ref|YP_861085.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117577549|emb|CAL66018.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 602

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 59/282 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++  ++ FI+ A++E    +  F+
Sbjct: 153 LTEPGAGSDANSGKTKAVLSDDGKHYSISGQKMWISNAGFANVFIVFARIEDDKNITGFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V    E+   NG+ +   + K+G  S++T ++ F           N +  PVE+M     
Sbjct: 213 V----ENDKENGITFGEEEKKLGIHSSSTRQVFF-----------NETKVPVENMLSERG 257

Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPV-----MKR 357
              KI      A+ +++  R+ LA A   A+RR       + +  +  D P+     +K 
Sbjct: 258 NGFKI------AMNALNVGRIKLAAASLDAQRRVTDLSVKYANDRVQFDTPISKFGAIKS 311

Query: 358 AIADIALDIAAATALSFRLANSF-DEAKSRSEEAA------------YARIMAPITKYWC 404
            +A++A       A S+R A +  D    R EE A            YA I   I K  C
Sbjct: 312 KLAEMATSAYVGEAASYRAAKNIEDRINLRLEEGASHSEAELKGVEEYA-IECSILKVAC 370

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       E ++  GG G+  +  +   +R++    I  G+
Sbjct: 371 SEDVQNCADEGIQVYGGMGFSADTPMESAWRDARIARIYEGT 412


>gi|146278601|ref|YP_001168760.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556842|gb|ABP71455.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 555

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 45/303 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    TP    +W PKI S E  PT                TE   G
Sbjct: 251 GSLGTRSEIAAELILCGGTPEQKAEWLPKIASAEILPTAV-------------FTEPNTG 297

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  K  D  + ++G+K W   +  +    +LA+ +        +  FL   +
Sbjct: 298 SDLGSLRTRAVKEGDD-WVVNGNKTWITHAARTHVMTLLARTDPETTDYRGLSMFLAEKM 356

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KI 314
           P   E+  P  G+    ++  +G R     E+ F    GF +   N+  G VE     ++
Sbjct: 357 PGTDENPFPTPGMTGGEIE-VLGYRGMKEYEIGFD---GFRVKGANL-LGGVEGQGFKQL 411

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   + +A++     + YA  R   G  LI+ P +   +A +A++I  A
Sbjct: 412 MQTFESARIQTAARAIGVAQSALEVGMQYAEDRKQFGKSLIEFPRVAGKLAMMAVEIMVA 471

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   D  +    EA  A+++         ++A A    A++  GG+G+  E  
Sbjct: 472 RQLTYFSAWEKDHGQRCDLEAGMAKLLG-------ARVAWASADNALQIHGGNGFALEYQ 524

Query: 430 IAR 432
           ++R
Sbjct: 525 VSR 527


>gi|158316306|ref|YP_001508814.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111711|gb|ABW13908.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 398

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA++R   G  + D   +   +AD+A  + A   +    A   D  +    EA  A 
Sbjct: 275 AIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAARKKDSGQRNDVEAGMA- 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 KY   +    V  E+    GG GY +E  I R YRE+P   +L+G G + V
Sbjct: 334 ------KYLASEYCHEVTTESFRIHGGYGYSKEYEIERLYREAP--FMLIGEGTSEV 382


>gi|86750377|ref|YP_486873.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86573405|gb|ABD07962.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 385

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/323 (20%), Positives = 121/323 (37%), Gaps = 34/323 (10%)

Query: 142 LMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           LM   E G++    V  A  V   M TP +      K  S E      AP         +
Sbjct: 69  LMMAEELGNINCGGVPMAIGVQTDMATPAL-----AKFGSDELRKEFLAPSISGDFVACI 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EG----RVGC 255
           G++E   G+D+A+I +  +   D      G  W  +   +D   +L    +G        
Sbjct: 124 GVSEPGAGSDVASIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNTGDGPAHRNKSL 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
             VP         G+   R  +K+G  S+ T ++ F        N  G            
Sbjct: 184 ICVPM-----KSKGVSIARKLDKMGMHSSDTAQIHFDEVRVPKRNRIGEEGAGFTYQMVQ 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ ++      A   +     ++   I Y R R   G  L+D  V+   +A++  ++  
Sbjct: 239 FQEERLW----GAAACIKAHERTIQNTIDYTRDRKAFGRPLLDNQVIHFKLAELQTEVEL 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +L +R A +    +  ++ A  A++ A        ++   +    ++  GG G++ E 
Sbjct: 295 LRSLVYRAAEALVAGEDVTQLATMAKLRAG-------RLGRELPDACLQYWGGMGFMNET 347

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            ++R YR+S   SI  G+   M+
Sbjct: 348 LVSRSYRDSRLTSIGGGADEVML 370


>gi|325528751|gb|EGD05815.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV+ +
Sbjct: 125 MGVTEPSTGSDTTKLKTTAVK-KDGRWVINGQKVWISRVQHSDLLILLARTTPLEQVQKK 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 184 SDGLSCFIVE--LDKAIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGTEGKGLKVI 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R V G  +     ++  +A+  ++
Sbjct: 242 FDGLNAERTLI----AAECIGDGYWFLEKARDYASERKVFGRPIGQNQGIQFPLAESFIE 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + +R     D  ++       A + A + KY   K +       ++  GG G+ 
Sbjct: 298 LEAANLMRWRACEKIDARQN-------AGVEANMAKYLAAKASWEAANACLQTHGGFGFA 350

Query: 426 EERSIARHYRES 437
            E  + R +RE+
Sbjct: 351 CEYDVERKFRET 362


>gi|283783823|ref|YP_003363688.1| crotonobetainyl-CoA dehydrogenase [Citrobacter rodentium ICC168]
 gi|282947277|emb|CBG86822.1| crotonobetainyl-CoA dehydrogenase [Citrobacter rodentium ICC168]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVNKLE-KLGLRMDSCCEINFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|170700525|ref|ZP_02891528.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170134559|gb|EDT02884.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 384

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP  +      + ++E   G+D  A+++  ++  DG + L+G K W   +  +D  I++A
Sbjct: 119 APYARGVTRSAMAISEPGAGSDPGALSTTAERNGDG-WVLNGRKIWISHASEADWTIVMA 177

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LLG 300
             +      G +  F+V R        G   +R    IG  S   + LE        LLG
Sbjct: 178 LTDRSKGKRGGISAFIVER-----DTPGFIIERRIPMIGGLSTYEIVLENCRLPATQLLG 232

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  P++       L+ A   +     ++A    YA++R   G  L ++  ++  +A
Sbjct: 233 REGEGFVPMQGRLSNRRLEMAAWCIGRAERAVALLCEYAKQRTTFGVPLAERQAVQWWVA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D    I A   +++       EA +R +    AR    + K +  +MA  VI  AM+ +G
Sbjct: 293 DALTRIHACRLMTY-------EAAARVDAGQDARTQISMVKVFATEMAWTVIDHAMQTLG 345

Query: 421 GSGYIEE 427
             G  +E
Sbjct: 346 AMGMTKE 352


>gi|325962780|ref|YP_004240686.1| butyryl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468867|gb|ADX72552.1| butyryl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 387

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 69/275 (25%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGR---- 252
           G GLTE   G+D     +  ++  DG + ++G+K F+++  +D    + +  V GR    
Sbjct: 123 GFGLTEPEAGSDAGGTKTTARR-EDGQWVINGNKEFITNSGTDITRLVTVTAVTGRKERE 181

Query: 253 -------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +   LVP         G   ++  NK+G  +        S+T    L D+ V 
Sbjct: 182 DGTVQKEISTILVPT-----DTPGFKAEKAYNKVGWNA--------SDTHPLTLQDVRVP 228

Query: 306 TGPVEDMK------ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
              +  ++       L  LD   ++++ +    A+     ++ YAR R   G        
Sbjct: 229 EANLLGVEGRGYANFLSILDEGRIAIAALATGAAQGCVDLSVKYARERSAFG-------- 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------------RIMAPITKY 402
                     +I    A+SF++A    EA++ S   AY             +  A I K 
Sbjct: 281 ---------QNIGKYQAISFKIARM--EARAHSARLAYYDAAFRMLAGKPFKTQAAIAKM 329

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              + A     +A +  GG G+I E ++ARHYR+S
Sbjct: 330 VAGEAAMDNARDATQVFGGYGFINEFTVARHYRDS 364


>gi|323450302|gb|EGB06184.1| hypothetical protein AURANDRAFT_29630 [Aureococcus anophagefferens]
          Length = 425

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 29/263 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDA------- 242
           M +  +    G++E   G+D+A I ++  +  D  Y ++G K W  +  ++ +       
Sbjct: 147 MTEAPLKCAYGVSEAGAGSDVAGIQTRAVRKGDD-YVINGSKLWITNGGVAQSSGDGGWY 205

Query: 243 FIM-LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294
           F++ +   +  VG  +   +++  +P      +L N +G R + T  L F       +N 
Sbjct: 206 FVLAVTDPDASVGRKMTGFVVDANTPGIDVGDKLVN-MGQRCSDTRPLFFEDVVVPAANV 264

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       ++ G  ++ +  +    A  +V   R +  EA+ YA+ R   G  +     
Sbjct: 265 LGSEGAGFKIAMGAFDNTRPPV----AAGAVGVARRATDEALAYAKERKTMGSPIAGHQS 320

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+ + A   D   S +       ++A + K +  +    V+++
Sbjct: 321 IAFMLADMATGIEAARLLTHKSAALIDSGVSNT-------MVASMAKAFAAEHCNKVVSD 373

Query: 415 AMECIGGSGYIEERSIARHYRES 437
           A++  GG+G+  E  + +  R++
Sbjct: 374 AVQIFGGAGFNTEYPVEKLMRDA 396


>gi|319654131|ref|ZP_08008220.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus sp.
           2_A_57_CT2]
 gi|317394065|gb|EFV74814.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus sp.
           2_A_57_CT2]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 38/246 (15%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLL 262
           RGG  I +   +     +G + ++G K F + +P+ D F + A +E  G +G FL+PR  
Sbjct: 134 RGGKPITSARKE-----EGFWIINGRKSFTTMAPVLDYFNVSATIEESGEIGNFLIPR-- 186

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------K 313
              S  GL  +   + I  R   + +L        LL ++ V    + ++          
Sbjct: 187 ---SSEGLEIEETWDSIAMRGTGSHDL--------LLKNVRVKQDALVELFQPGKKGAAG 235

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR---RHVSGGILIDQPVMKRAIADIALDIAAAT 370
            L+++ +  + ++  + +   AI +A+      +SG I ID P +++ I ++ L++  A 
Sbjct: 236 WLLHIPACYLGIA--QAAQDYAITFAKNYSPNSISGAI-IDLPNVQQKIGEMELELMRAR 292

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              + +A  +DEA   +       + A   K      A AV+  AM   G      +  +
Sbjct: 293 HFLYSVAKKWDEANDEARSRMQPELGA--VKLAVTNAAIAVVDLAMRVAGARSLSAKNPL 350

Query: 431 ARHYRE 436
            R+YR+
Sbjct: 351 QRYYRD 356


>gi|295673634|ref|XP_002797363.1| acyl-CoA dehydrogenase family protein [Paracoccidioides
           brasiliensis Pb01]
 gi|226282735|gb|EEH38301.1| acyl-CoA dehydrogenase family protein [Paracoccidioides
           brasiliensis Pb01]
          Length = 505

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D++ I +   K  DG  Y +SG  KW  +   +D F+   + E      L
Sbjct: 249 LAVTEAFAGSDVSGIRTTATKTPDGKHYIISGTKKWITNGMWADYFVTACKTEKGYSVIL 308

Query: 258 VPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----SNTFGFLLGDLNVSTGPVE 310
           VPR   +E                    N  V +E       N F  ++ + N     + 
Sbjct: 309 VPRDENIETKRIKTAYSTTAATTFIQFDNVKVPVENLLGEEHNGFIVIMSNFNHERWAM- 367

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD-IALDIAAA 369
                     A M     R  + E + +A +R V G  LI+QPV+++ +A  I+L  A+ 
Sbjct: 368 ----------ACMVSRWNRTVVEECLKWANQRIVFGKPLINQPVIRQKLAKMISLTEASQ 417

Query: 370 TAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           + L   ++++ N      S +++  +      + K +  + A  +  +A+   GG G  +
Sbjct: 418 SWLETITYQMCNM-----SYAQQTKHLGGPIGLLKSYATRCAHQIADDAVNIFGGRGITQ 472

Query: 427 E---RSIARHYRESPANSILLGS 446
               R + + +R    ++IL G+
Sbjct: 473 TGMGRVVEQFHRTYKFDAILGGT 495


>gi|163788944|ref|ZP_02183389.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159876181|gb|EDP70240.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 600

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 33/270 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +  +DG  Y ++G K W  ++      I+ A++E    +  F+
Sbjct: 149 LTEPGAGSDANSGKTTAELSADGKSYKINGQKMWISNAGFCSLMIVFARIEDDKNITGFI 208

Query: 258 VPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           V     DG +PNG+     ++K+G R+++T ++ F++T   ++   N+  G  E  KI +
Sbjct: 209 VEY---DGDNPNGVTLGEEEHKLGIRASSTRQVFFNDT---VVPVDNMLAGRGEGFKIAM 262

Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  +  A   +   R  L  A++YA  R      + D   +K  +A +A D  A  
Sbjct: 263 NALNVGRIKLAAACLDSQRRILTTAVNYANERKQFKTPISDFGAIKMKLAKMAADAYAGE 322

Query: 371 ALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + ++R A              NS  EA+ +  E  YA I   I K    +       E +
Sbjct: 323 SATYRAAKNIEDRIAIRETSGNSHQEAELKGVE-EYA-IECSILKVAVSEDVQNCADEGI 380

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG G+ EE  +   +R++    I  G+
Sbjct: 381 QIFGGMGFSEETPMEAAWRDARIARIYEGT 410


>gi|228940197|ref|ZP_04102768.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973088|ref|ZP_04133680.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228979695|ref|ZP_04140019.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis Bt407]
 gi|228780008|gb|EEM28251.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis Bt407]
 gi|228786647|gb|EEM34634.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819323|gb|EEM65377.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326940846|gb|AEA16742.1| Acyl-CoA dehydrogenase, short-chain [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 382

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262
           RGG        QG+      + ++G K F + +P+ D FI+ A +EG+  VG F++PR  
Sbjct: 136 RGGKPETIAVQQGEN-----WVINGRKTFTTMAPVLDYFIISASMEGQEEVGEFVIPR-- 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320
              +  G+  +   + +  R  A+ +L   N         +V  G V+   I  L+++ +
Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTDVKGGKVKQKGIGWLLHIPA 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + ++    + A     + + +     +   P +++ + ++ L++  A    +++A  +
Sbjct: 246 CYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRKLVGELELELMQARVFLYQIAKKY 305

Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           DEA+ + S +A  A +     KY     A +++ ++M  +G     E+  + R+Y
Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 355


>gi|120401247|ref|YP_951076.1| butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119954065|gb|ABM11070.1| Butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 385

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 31/273 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           PM    +   + LTE  GG+D+ A+++  ++  D +       W  ++  S    +L + 
Sbjct: 112 PMATGELRATMALTEPGGGSDLQAMSTVARRDGDELVISGAKTWISNARRSGLIALLCKT 171

Query: 250 EGRVGCFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           +        PR      +L D   +GL   R   K+G +   + EL F         +LG
Sbjct: 172 DPEA----TPRHSGISVVLVDNPTDGLTVSRDLPKLGYKGVESCELTFDGCRVPESAILG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-- 358
                 G  + MK    L++  + V+   + +A A       +        QP+ K    
Sbjct: 228 G-AAGRGFAQMMK---GLETGRIQVASRALGVASAALADALAYAQDRESFGQPIWKHQAV 283

Query: 359 ---IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  + AA  L+   A+ +D       EA  A++ A        ++A  +   A
Sbjct: 284 GHYLADMATKLTAARQLTLYAADRYDSGARADMEAGMAKLFA-------SEVAMEIALNA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +   GG GY  E  + R++R++P   +++G G 
Sbjct: 337 VRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 367


>gi|289748727|ref|ZP_06508105.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T92]
 gi|289689314|gb|EFD56743.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T92]
          Length = 399

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 45/242 (18%)

Query: 245 MLAQVEGR------VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFS 292
           MLA+ EG       +  + VP+ L   E G P   NG+    +++K+G + +AT EL F 
Sbjct: 1   MLARPEGAGPGTKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFG 60

Query: 293 N----TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
                  G+L+G+++         +E  ++++       +++ +      A+ YA+ R V
Sbjct: 61  QHGVPAKGWLVGEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-V 115

Query: 345 SGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            G  L                P ++R++           AL    A   D A +      
Sbjct: 116 QGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGV 175

Query: 392 YARI-------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            A++       M P+ K    + A A + E+++ +GGSG++++  I ++ R++  +S+  
Sbjct: 176 DAKLAVKVNDLMLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYE 235

Query: 445 GS 446
           G+
Sbjct: 236 GT 237


>gi|315503036|ref|YP_004081923.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409655|gb|ADU07772.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 383

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 42/270 (15%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
           V   + ++E   G+D+A ++ + ++  DG + ++G K W  ++ +++  +++A+  GR G
Sbjct: 118 VVEAVAMSEPEAGSDVANLSCRAERRGDG-WVVNGQKTWCSNAHLAEHILLVARTSGRAG 176

Query: 255 ------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                  FLVP     G+P GL    +    G   N   +L F++    L  D  V  G 
Sbjct: 177 DHQGLTMFLVP----AGAP-GLTVSGIDTMGGREVN---DLYFTDC--VLPADAVV--GR 224

Query: 309 VE----------DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           V+          +M+ LI L S ++ ++  R +  + + Y + R      +    V++  
Sbjct: 225 VDHGWRQLMAGLNMERLI-LASVVLGIA--RRAFDDVVAYVKDRRQFRRPIGSFQVIRHR 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +AD+A +I  A  L +  A   D+A       E++ A++ A  T       A  V  +AM
Sbjct: 282 LADLATEIECARLLVYDTAAKVDKAPDTVLPRESSMAKLKATET-------ARRVALDAM 334

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  E  + R  R +  +++  G+
Sbjct: 335 QMMGGYGYTTEFDMERLVRSAIVSTVYGGA 364


>gi|78060410|ref|YP_366985.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964960|gb|ABB06341.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV+ +
Sbjct: 125 MGVTEPTTGSDTTKLKTTAVK-KDGRWVINGQKVWISRVQHSDLLILLARTTPLDQVQKK 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 184 SDGLSCFIVE--LDKAIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGTEGKGLKVI 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R V G  +     ++  +A+  ++
Sbjct: 242 FDGLNAERTLI----AAECIGDGYWFLEKARDYASERKVFGRPIGQNQGIQFPLAESFIE 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + +R     D  ++       A + A + KY   K +       ++  GG G+ 
Sbjct: 298 LEAANLMRWRACEKIDARQN-------AGVEANMAKYLAAKASWEAANACLQTHGGFGFA 350

Query: 426 EERSIARHYRES 437
            E  + R +RE+
Sbjct: 351 CEYDVERKFRET 362


>gi|71905742|ref|YP_283329.1| isovaleryl-CoA dehydrogenase [Dechloromonas aromatica RCB]
 gi|71845363|gb|AAZ44859.1| isovaleryl-CoA dehydrogenase [Dechloromonas aromatica RCB]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 21/257 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K  D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLKAEKKGD-RYVLNGSKMWITNGGDADTLVVYAKTDLNAGAKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G  +    +K+G R + T  L F +     + + NV  G     K+L+  
Sbjct: 187 TAFIVEKGMKGFTHGTHLDKLGMRGSNTFPLFFDDC---EVPEENVLGGVGNGTKVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD     + G     M   +   + Y   R   G  + +  +M+  +AD+     A  A 
Sbjct: 244 LDYERAVLCGGPLGIMAACMDVVVPYLHERKQFGQAIGEFQLMQGKVADLYSTWQATRAY 303

Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +   R  ++ D +++  ++AA A + +     W       +  EA++ +GG GY  E  
Sbjct: 304 VYAVGRACDATDHSRTLRKDAAGAILYSAEKATW-------MAGEAIQTLGGVGYTNEYP 356

Query: 430 IARHYRESPANSILLGS 446
             R +R++    I  G+
Sbjct: 357 TGRLWRDAKLYEIGAGT 373


>gi|323488665|ref|ZP_08093907.1| butyryl-CoA dehydrogenase-like protein [Planococcus donghaensis
           MPA1U2]
 gi|323397683|gb|EGA90487.1| butyryl-CoA dehydrogenase-like protein [Planococcus donghaensis
           MPA1U2]
          Length = 593

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 57/318 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     +  +    G  Y L+G K W  ++  +D F++ A+++G +   F+V
Sbjct: 149 LTEPSSGSDALGAKTVAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGDKFSAFIV 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312
            R        G+     + K+G +S++T  L        +L D  V   PVE++      
Sbjct: 209 EREF-----PGVSVGPEEKKMGIKSSSTRTL--------ILEDAEV---PVENLLGEAGR 252

Query: 313 -KILIY-------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             I+ +           + ++   + ++   I Y  +R      +    + +  +A +A 
Sbjct: 253 GHIIAFNILNIGRYKLGVGTIGASKRAMELTIPYTNQRQQFKTPISSFNLTREKLATMAS 312

Query: 365 DIAAATALSFRLANSFDEAKS--RSEEAAYARIMA----------PITKYWCCKMAPAVI 412
            + A  +  +R    F++  S    E+ A  +++A           + K++  +    ++
Sbjct: 313 KLYAVESSVYRTVGLFEDRMSGFTDEQHADGKLVADAIAEFAVECSLNKFFGTETLDYIV 372

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEK 460
            E ++  GG G+++E  I R YR+S  N I  G+     L V            L LL+ 
Sbjct: 373 DEGVQLHGGYGFMQEYEIERIYRDSRINRIFEGTNEINRLLVPGTLLRKAMKGELPLLQH 432

Query: 461 GTNLFEQLFSTLEQDLGS 478
              L E+L   + +++G+
Sbjct: 433 AQKLQEELLMMMPEEVGT 450


>gi|251777659|ref|ZP_04820579.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243081974|gb|EES47864.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 379

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 22/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A++      +    Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 123 FGLTEPVAGTD-ASMQKTTAVLEGDHYVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G      + K+G R+++T EL F N       LLG+     G       +
Sbjct: 182 SAFIVEKDFPGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIA-----M 236

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +AE      + Y + R   G  +      +  +A +     AA 
Sbjct: 237 ATLDGGRIGIAAQALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAK 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A + D+ +  +  AA A+++A        + A  V    ++  GG GY  +  I
Sbjct: 297 LLVYQAACAKDDHEKYTHLAAMAKLVAS-------RNATNVTNRCLQLFGGYGYSSDYPI 349

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R  R++    I  G+    ++
Sbjct: 350 ERMMRDAKITEIYEGTSEVQMM 371


>gi|115497690|ref|NP_001068703.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
 gi|122144044|sp|Q3SZB4|ACADM_BOVIN RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|74267842|gb|AAI02990.1| Acyl-coenzyme A dehydrogenase, C-4 to C-12 straight chain [Bos
           taurus]
 gi|154163111|gb|ABS70460.1| C-4 to C-12 straight chain acyl-coenzyme A dehydrogenase [Bos
           taurus]
 gi|296489201|gb|DAA31314.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
          Length = 421

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 160 VTEPVAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 219 FTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVRVPKENVLIGEGAG 269

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G +LI+   +   +A++A+ 
Sbjct: 270 FKIAMGAFDKTRPPVAAAAVGLAQRALDEATKYALERKTFGKLLIEHQGISFLLAEMAMK 329

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  + ++A++  GG+G+ 
Sbjct: 330 VELARLSYQRAAWEVDSGRRNT-------YYASIAKAYAGDIANQLASDAVQIFGGNGFN 382

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + +  R++    I  G+
Sbjct: 383 TEYPVEKLMRDAKIYQIYEGT 403


>gi|254818879|ref|ZP_05223880.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 394

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 28/282 (9%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           SMV++  +  +   W    F  E       P   T   +G  GLTE   G+D AA+ ++ 
Sbjct: 101 SMVSVQGSLAMFAIWN---FGSEEQKQEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRA 157

Query: 219 QKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           ++  DG  + L+G K W  +  ++D  ++ A  +  V  F+VP         G     + 
Sbjct: 158 RR--DGSDWVLTGRKLWITNGSVADVAVVWANTDNGVRGFIVPT-----KTAGFSANTIH 210

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVS 331
           +K+  R++ T EL   +       +L +     GP+  +    Y    I+  S+   R +
Sbjct: 211 HKLSLRASITSELVLDDVRLPAEAMLPEAKGLRGPLSCLSEARY---GIIWGSMGAARSA 267

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA +R   G  +    + +  + D+A+++     LS  L    D    R E+ +
Sbjct: 268 WQAALDYATQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDSVGLRPEQVS 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + ++         C+ A  +       +GG+G   E  + RH
Sbjct: 328 FGKLNNTREAIEICRTARTI-------LGGNGISLEYPVIRH 362


>gi|71655817|ref|XP_816465.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881596|gb|EAN94614.1| hypothetical protein Tc00.1047053510121.40 [Trypanosoma cruzi]
          Length = 472

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 25/253 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++T++ +K++ G Y LSG K W  S+P++D  ++ A
Sbjct: 205 PKLATGELIGCFGLTEPNAGSDPMSMTTRARKVAGG-YSLSGCKTWITSAPLADIAVVWA 263

Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           ++    ++  F+V R  +     G   +R++ K+  R++ T  +   N    ++ + NV 
Sbjct: 264 KLHDTNKIAGFIVERDFK-----GFATERIEGKLSLRTSCTGMIVLDNC---IVPEENVL 315

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                       L SA   ++   V  AE     A  Y+  R   G  +    +++  +A
Sbjct: 316 PHATGLKAPFNCLSSARYGIAWGVVGAAETCFNIARDYSLERKQFGKSIASMQLVQAKLA 375

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D   +I  A     R     DE K   +       +  + K    + A  +     + +G
Sbjct: 376 DAVTEITLAMQSCLRAGRLKDEGKLSHQ-------VISMLKRNNTRKAIEIARAMRDILG 428

Query: 421 GSGYIEERSIARH 433
           G+G  +E  + RH
Sbjct: 429 GNGISDEYHVMRH 441


>gi|328957925|ref|YP_004375311.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674249|gb|AEB30295.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 420

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 46/289 (15%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +P     W PK             +Q   +     LTE   G+D AA  +   +   
Sbjct: 139 LGGSPEQQMRWLPK-------------LQNFELQTCFALTEPEHGSDTAAGLATTARREG 185

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI- 279
             + ++G K W   +  +D   + A+   + +V CF+V +        GL    + +KI 
Sbjct: 186 DKWIINGEKRWIGGASSADLIPVYARDVEDNKVKCFIVEK-----GQKGLSVDDIDDKIA 240

Query: 280 ------GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRV 330
                 GN     VE+  SN    + G         +D+  ++Y   A ++ +G   M  
Sbjct: 241 LRIVQNGNIHLDNVEVVESNRLQNING--------FKDVAKVLYATRAGVAYAGAGMMAG 292

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           SL  A+ Y   R   G  +    +++  +A +  +   A ALS RLA    E + R E  
Sbjct: 293 SLEAALEYTTNRVQFGKPIASFQLVQEKLARMQGNAVNALALSARLA----ELQERGE-- 346

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++ I A + K          +A   E  GG+G   ER++AR + ++ A
Sbjct: 347 -FSEINASLAKMNNSLRLRETVALGREVCGGNGITLERNVARFFCDAEA 394


>gi|239979569|ref|ZP_04702093.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 391

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 42/316 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI--TSQGQ 219
           + L  T    ++W P++ + E             +    GLTE   G+D      T++  
Sbjct: 100 IHLFGTEEQKREWLPRLCAGE-------------ILGAFGLTEPGAGSDAGGTRTTARLD 146

Query: 220 KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRL 275
           + +D  + ++G K F+++  +D    + +  V GR   G  L+  ++      G      
Sbjct: 147 EATD-EWVINGGKCFITNSGTDITGLVTVTAVTGRKPDGSPLISAIIVPSGTPGFTVAAP 205

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G  ++ T EL F         LLG+           + L  LD   ++++ +   L
Sbjct: 206 YSKVGWNASDTRELSFDEVRVPAANLLGEQGRGY-----AQFLRILDEGRIAIAALGTGL 260

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A     E++ YA  RH  G  +     ++  IAD  +D  A TA   RLA  + +A SR 
Sbjct: 261 AQGCVDESVKYAAERHAFGKPIGANQAIQFKIAD--MDTRAYTA---RLA--WRDAASRL 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 +  A   K     +A     +A +  GG G++ E  +AR +R+S    + +G G
Sbjct: 314 VAGEPFKKQAAAAKLHSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGEG 371

Query: 448 NAMVLDVLNLLEKGTN 463
            + V  +L   E G  
Sbjct: 372 TSEVQRMLIARELGVG 387


>gi|209155496|gb|ACI33980.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor [Salmo salar]
          Length = 441

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D   + ++ +   S   + L+G K W  +SP++D  ++ A+ + G+V  F
Sbjct: 180 FGLTEPNHGSDPGGMETRAKFNPSSRTFTLTGSKTWITNSPVADIAVVWAKCDDGKVCGF 239

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           ++ R ++     G    +++ K   R++AT       VE+   N    LL  ++   GP 
Sbjct: 240 ILERGMK-----GFTTPKIEGKFSLRASATGMIIMDEVEVPEEN----LLPKVSGLGGP- 289

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   ++   +  AE   +A R++    I    P+     M++ +AD+  
Sbjct: 290 -----FGCLNNARYGIAWGSLGAAEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLT 344

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D  K+  E       M  + K   C  +  +  +A + +GG+G 
Sbjct: 345 EITIGLQACLQLGRLIDAKKAAPE-------MISMLKRNSCGKSLDIARQARDMLGGNGI 397

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 398 SDEYHIIRH 406


>gi|118473535|ref|YP_890894.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174822|gb|ABK75718.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 397

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 19/242 (7%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
           AIG  GLTE   G++ A + ++ ++  DG  + L+G K W  +  ++D   + AQ +  +
Sbjct: 137 AIGCFGLTEPDFGSNPAGMRTRARR--DGSDWILNGTKMWITNGNLADVATVWAQTDDGI 194

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP      +P G     +  K+  R++ T EL   N        L ++ G    + 
Sbjct: 195 RGFLVP----TDTP-GFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLS 249

Query: 314 ILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L      I+  ++   R SL   I Y + R V    L +  + +  +A++ +++     
Sbjct: 250 CLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGML 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+  L    D    R E+ +  ++          + A A+  E    +GGSG   E S  
Sbjct: 310 LAIHLGRIKDAEGVRPEQISLGKLNN-------VREAIAIARECRTLLGGSGITLEYSPL 362

Query: 432 RH 433
           RH
Sbjct: 363 RH 364


>gi|295661095|ref|XP_002791103.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226281030|gb|EEH36596.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 435

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 30/297 (10%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     + +  +   LG+TE   G+D+A I +  ++ S   Y ++G K ++++ +  
Sbjct: 142 EYMPK----VSRGEIRFCLGITEPDAGSDVANIKTTAKR-SGNKYIVNGAKKWITNGLWA 196

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTF 295
            +   A   G  G   +  L+   +  G+  +R++N   N S +T      VE+   N  
Sbjct: 197 NYCTAAVRTGGPGRKGISLLIVPLAAKGVTRRRMENSGVNASGSTFIEFDDVEVPVENLI 256

Query: 296 G-------FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           G       +++ + N              L  A   +   RV   +A +YA +R   G  
Sbjct: 257 GTENHGFTYIMSNFNPER-----------LSMAAACIRLSRVCAEDAYNYAIKRETFGQP 305

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           LI   +++   +     I    A   +LA +   A    ++      M  + K    +  
Sbjct: 306 LIANQIIRAKFSKFGELIEPCQAYLEQLAYTLHVAAKTGQQGVDVGGMTALLKVMTTRCL 365

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLLEKGTNL 464
             V  EA + +GG+GY +    AR  + S      ++G G+  +L  L + ++  NL
Sbjct: 366 EKVCREAQQVMGGAGYNKSGKGARIEQISRDVRVFVVGGGSREILSDLAVRQEMKNL 422


>gi|225718798|gb|ACO15245.1| Isovaleryl-CoA dehydrogenase, mitochondrial precursor [Caligus
           clemensi]
          Length = 458

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 26/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           L ++E   G+D+ ++ +    I DG  Y L+G K W  + P +D  ++ A+ + +     
Sbjct: 195 LAMSEPGSGSDVVSMRTTA--IEDGDHYVLNGSKFWITNGPDADVLVVYAKTDPKNPKPQ 252

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  FL+    E G P G       +K+G R + T EL F N       +LGDLN    
Sbjct: 253 HGITAFLI----EKGMP-GFSTGPKLDKLGMRGSNTCELIFDNCRVPKENILGDLNKGVY 307

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     L  L  A   V  M+ +   A  YA  R      +    +++  +AD+   + 
Sbjct: 308 VLMSGLDLERLVLAAGPVGIMQSACDVAWSYAHERKQFSTPIGKFQLIQGKMADMYTTLN 367

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A  + +  + D+     ++ A   +        C + +  +  +A++ +GG+GYI +
Sbjct: 368 SCRAYLYNVGRACDKGHVSPKDCAGVILH-------CAEKSTQMGLDAIQILGGNGYIND 420

Query: 428 RSIARHYRESPANSILLGS 446
               R  R++    I  G+
Sbjct: 421 YPTGRFLRDAKLYEIGAGT 439


>gi|222055279|ref|YP_002537641.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564568|gb|ACM20540.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 379

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 18/264 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  AI +  +   D  + ++G K F+++       ++ A  +  +    V  
Sbjct: 125 LTEPDAGSDAGAIATTYKHDGDD-FVINGSKIFITNGGYKGTGVLFATSDKSLKHKGVSA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + D    G+   + + K+G R + T      N     +   N+     E  KI +  L+
Sbjct: 184 FIIDLQSPGVEILKNEKKLGIRGSYTTAFALDNV---RIPAANLLGQEGEGFKIAMDTLN 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AE     A+ Y++ R   G  + D   ++  +AD+   I  +  +++
Sbjct: 241 GGRIGIASQALGIAEGAFERALAYSKERKQFGAPISDLQAIQFKLADMYARIETSKLMTY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D+ K+ + E+A  +++A        + A  V  EA++  GG G+I +  + R Y
Sbjct: 301 KAACLKDKKKNYTMESAMCKMLA-------SEAATYVTKEAIQIHGGYGFIVDYEVERMY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++    I  G+     + +  LL
Sbjct: 354 RDAKITEIYEGTNEVQRVVISKLL 377


>gi|291451438|ref|ZP_06590828.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291354387|gb|EFE81289.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 42/316 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI--TSQGQ 219
           + L  T    ++W P++ + E             +    GLTE   G+D      T++  
Sbjct: 98  IHLFGTEEQKREWLPRLCAGE-------------ILGAFGLTEPGAGSDAGGTRTTARLD 144

Query: 220 KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRL 275
           + +D  + ++G K F+++  +D    + +  V GR   G  L+  ++      G      
Sbjct: 145 EATD-EWVINGGKCFITNSGTDITGLVTVTAVTGRKPDGSPLISAIIVPSGTPGFTVAAP 203

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G  ++ T EL F         LLG+           + L  LD   ++++ +   L
Sbjct: 204 YSKVGWNASDTRELSFDEVRVPAANLLGEQGRGY-----AQFLRILDEGRIAIAALGTGL 258

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A     E++ YA  RH  G  +     ++  IAD  +D  A TA   RLA  + +A SR 
Sbjct: 259 AQGCVDESVKYAAERHAFGKPIGANQAIQFKIAD--MDTRAYTA---RLA--WRDAASRL 311

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 +  A   K     +A     +A +  GG G++ E  +AR +R+S    + +G G
Sbjct: 312 VAGEPFKKQAAAAKLHSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGEG 369

Query: 448 NAMVLDVLNLLEKGTN 463
            + V  +L   E G  
Sbjct: 370 TSEVQRMLIARELGVG 385


>gi|326921769|ref|XP_003207128.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Meleagris
           gallopavo]
          Length = 440

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 28/248 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EG----RVG 254
           LG++E   G+D+A+I +   +  D      G  W  S   +D   +LA   EG       
Sbjct: 209 LGISEAGAGSDVASIKTAAVRKGDEYIINGGKMWTTSGCQADWMCLLANTSEGHPHRNKS 268

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
              +P  L      G+   +  +K+G RS+ T ++ F +       L+G+  +       
Sbjct: 269 LICLPMNLP-----GIHITKKIDKLGMRSSDTAQIFFEDVRVPSKNLIGEEGMGF----T 319

Query: 312 MKILIYLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++L + +  +  V+ +   L     E I Y R+R V G  ++    +   +A++A ++ 
Sbjct: 320 YQMLQFQEERLWGVATVLTPLETIIQETIDYTRQRKVFGQSVLQNQAVHFRLAELATEVE 379

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              +L +R    + E    ++ A+ A++ A        ++A  V    ++  GG G+  E
Sbjct: 380 LLRSLLYRTIALYVEGNDVTKFASMAKLKA-------GRLAREVTDSCLQFWGGMGFTSE 432

Query: 428 RSIARHYR 435
             ++R YR
Sbjct: 433 VLVSRFYR 440


>gi|269962588|ref|ZP_06176935.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832701|gb|EEZ86813.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 130/280 (46%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + +   D  + ++G+K W  + P +D  ++ A+ +   G    
Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDH-FLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F++ R  E     G  + +  +K+G R + T EL F +       +LG+LN     VE
Sbjct: 189 TAFIIERDFE-----GFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRG---VE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  + E + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +A + D  +   ++AA   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AAKAYVYAVAAACDRGECTRKDAAGVIL-------YSAELATQMSLDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +  R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 YATGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387


>gi|240171618|ref|ZP_04750277.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium kansasii ATCC 12478]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRAKADGDD-WILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            +      G      + K+G + + T EL F N    + GD  +   P    K  L  LD
Sbjct: 193 FMVHKDDEGFTVGPKERKLGIKGSPTTELYFENC--RIPGDRIIGE-PGSGFKTALATLD 249

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               ++    V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + +
Sbjct: 250 HTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVY 309

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A     A++   E     I A  +K +   +A  V  +A++  GG+GY  +  + R  
Sbjct: 310 TAA-----ARAERGEQNLGFISAA-SKCFASDVAMEVTTDAVQLFGGAGYTVDFPVERMM 363

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 364 RDAKITQIYEGT 375


>gi|83638340|gb|ABC33874.1| probable acyl-CoA dehydrogenase [Rhodococcus sp. T104]
          Length = 378

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           + L+E   G+D+  +  + + + D  Y ++G K W  ++ +++  ++LA+ +        
Sbjct: 122 IALSEPGAGSDLGGVRIKAELVDDH-YVVNGQKTWISAAHVAEHILLLARTDASGNKHQG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+VP      SP GL    ++       N     + +     ++G  N +   +   
Sbjct: 181 LTLFMVPA----DSP-GLEIHGIETMEARTCNDLYFTDVAVPASAVVGTPNQAWRHLMRG 235

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L  A M++ G + SL + I +   R   G  +     ++  IAD+A +IA A + 
Sbjct: 236 LSVERLIIATMALGGAQRSLDDVIAFVTEREQFGQKISSFQAIRHRIADLATEIAFAKSF 295

Query: 373 SFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +A   D  E  + + E + A++        C ++A     EAM+ +GG GY  E  +
Sbjct: 296 VYDVAERIDAGEEDNLNREGSMAKLK-------CTEIAKKTALEAMQMMGGYGYTREYGM 348

Query: 431 ARHYRESPANSILLGS 446
               R S A  I  G+
Sbjct: 349 EEQVRRSLAPPIYGGT 364


>gi|66045014|ref|YP_234855.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|63255721|gb|AAY36817.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
          Length = 383

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 33/279 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---- 236
           D    A ++K +    +G   LTE   G++   + ++ +   D  + ++G K F+S    
Sbjct: 105 DEQKHAWLEKLATGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKR 163

Query: 237 SPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           + ++  F +     G+ G   FLVP         G    R ++K+G R++ T  +  +N 
Sbjct: 164 AQLAIVFAVTDPALGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNC 218

Query: 295 ---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                 LLG+    L+++   +E  +I I    A  ++   R +   A+ YAR R     
Sbjct: 219 RIPAANLLGERGKGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDK 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+   I AA  L+   A      ++   EA+ A++ A     W C  
Sbjct: 275 PIIEHQSIANLLADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAEWVC-- 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                ++A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 333 -----SKAIQIHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|260815679|ref|XP_002602600.1| hypothetical protein BRAFLDRAFT_281524 [Branchiostoma floridae]
 gi|229287911|gb|EEN58612.1| hypothetical protein BRAFLDRAFT_281524 [Branchiostoma floridae]
          Length = 434

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 112/271 (41%), Gaps = 38/271 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFL 235
           +  E       P   T   IG  GLTE   G+D   + ++ +   +   Y L+G K W  
Sbjct: 152 YGSEVQKRKYIPRLATGELIGCFGLTEPNHGSDPGGMETRAKWDENKKCYILNGAKSWIT 211

Query: 236 SSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------V 287
           +SP++D FI+  + E GRV  F+    LE G   GL   +++ K   R++ T       V
Sbjct: 212 NSPIADVFIVWGKCEDGRVRGFI----LEKGM-GGLSAPKIEGKFSLRASTTGQIVMEDV 266

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           E+   N    LL  ++   GP         L++A   +S   +  AE     A  Y   R
Sbjct: 267 EVPQDN----LLPGVHGLAGP------FGCLNNARFGISWGTLGAAEFCLETARQYTLDR 316

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD+  +I        ++    D+ ++  E       M  + K 
Sbjct: 317 IQFGVPLARNQLIQKKMADMLTEITLGLQSCLQVGRLKDQGRATPE-------MISMVKR 369

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             C  +  +   A + +GG+G  +E  + RH
Sbjct: 370 NSCGKSLDIARSARDMLGGNGICDEYHVIRH 400


>gi|194290930|ref|YP_002006837.1| isovaleryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224765|emb|CAQ70776.1| Isovaleryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 395

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 12/259 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           L LTE   G+D         +     Y L+G K F+S+ P++D  ++ A+ E  +G   +
Sbjct: 128 LALTEPGAGSDALGSMRTAARRDGDHYVLNGRKMFISNGPVADVVLVYAKTEPTLGAKGI 187

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E G P     Q+L NK+G R   T EL F         L+G  N     V     
Sbjct: 188 SAFIVEKGFPGFSVAQKL-NKMGWRGAPTGELVFDECRVPARNLVGGENRGVAVVMSGLD 246

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD--IALDIAAATAL 372
           +     A+  +   +  L  ++ YA  R   G  +    +++  +AD  + L+ A A A 
Sbjct: 247 IERAFLALSCIGSAQRCLDLSLEYASTRQQFGKPIESFQLVQAMLADMFVELEAARALAY 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +A +  E         +    A I K    +M  +V  +A++  GGSG+I E  + R
Sbjct: 307 RALMACNDLERGGGGRGDIHKLCAASILK--VAEMLLSVTDKAVQIHGGSGFIWETEVNR 364

Query: 433 HYRESPANSILLGSGNAMV 451
           HYR +   +I  G G + V
Sbjct: 365 HYRNAKLATI--GGGTSEV 381


>gi|111221036|ref|YP_711830.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111148568|emb|CAJ60241.1| Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 405

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 65/335 (19%)

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +AG  MS   T+  +  +++  TP    +WAP+ F    DP   A            ++E
Sbjct: 83  DAGIGMSIMGTTLGVAGIVSAGTPEQIGEWAPQCFGDASDPKVAA----------FCVSE 132

Query: 205 KRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFL 257
              G+D++A+  + +   +   + LSG K W  +  ++   +++A V+  +G      F+
Sbjct: 133 PGAGSDVSALRVRARHDPATDEWILSGQKAWITNGGIAAVHVVVASVDPELGSRGQAAFV 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMK 313
           VP     G+P GL   R   K+G R++ T ++         L D+ V      G  E + 
Sbjct: 193 VP----PGTP-GLTASRKIRKLGLRASHTADV--------FLDDVRVPGRCLLGGRERLD 239

Query: 314 ILIYLDSAIMSVSGM---------------------RVSLAEAIHYARRRHVSGGILIDQ 352
             +    A    SG                      R +   A+ YAR R   G  +I  
Sbjct: 240 ERLAAARAGRRASGQAALATFEVTRPIVGAQAIGIARAAYEYALDYARGREQFGRPIITN 299

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAV 411
             +  A+AD+ ++I AA  L +R A      +   + E + +++ A     W  +     
Sbjct: 300 QAIAFALADMRMEIDAARLLIWRAAWMGHSGRPFEAGEGSMSKLKASEVAVWATE----- 354

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +A++ +GG+GY  +  + R +R+S   +I  G+
Sbjct: 355 --KAVQILGGAGYSRDHPVERMFRDSKIYTIFEGT 387


>gi|91791080|ref|YP_552030.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
 gi|91700961|gb|ABE47132.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
          Length = 388

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 32/247 (12%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P + + W  +I + E               + LGLTE RGG+D A +  + +++ D  Y
Sbjct: 100 SPELARTWNSRIVAGE-------------AIVALGLTEPRGGSDAANLQLKARRVGDE-Y 145

Query: 227 CLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKN---K 278
            LSG K  ++ +  +DA ++ A+     EG  G   +   L D +  G+   R  +   K
Sbjct: 146 ILSGEKTSITFADQADAMVLFARTGKPEEGARG---ISAFLVDLNQPGVQRTRFNDVGSK 202

Query: 279 IGNRSNA---TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           I  R +     V +  +N  G             +  +ILI    A+  V+  + S+ E 
Sbjct: 203 IIGRGSVFFDDVRVPVANRLGAEGKGFTQVMQGFDFSRILI----ALQCVAAAQASIDET 258

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y + R   G  L     +   I +    IAA   L +      D  +  + EAA  + 
Sbjct: 259 WEYVKERQTFGAPLAQYQGVSFPIVEFETLIAACRQLCYHGLALRDAGQPHTAEAAMVKW 318

Query: 396 MAPITKY 402
           M P T +
Sbjct: 319 MGPKTAF 325


>gi|332017158|gb|EGI57957.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 38/273 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254
           L ++E   G+D+ ++  + ++  D  Y L+G+K W  ++P +D  I+ A+ +  V     
Sbjct: 128 LAMSESGAGSDVVSMKLRAERKGD-YYVLNGNKFWITNAPDADTLIVYARTDPNVDKPKH 186

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
               F+V R  E     G       +K+G R + T EL F +       +LG++N     
Sbjct: 187 GITAFIVERDTE-----GFSTGEKLDKLGMRGSNTGELIFEDCKVPAANVLGEIN----- 236

Query: 309 VEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            + + +L   LD   + + G     M+     A  YA  R   G  L    +++  IA++
Sbjct: 237 -KGIYVLFSGLDLERLILCGGPLGIMQACCDVAFEYAHTRQQFGQYLAKFQMIQAKIANM 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              ++A+ +  + +A S D      +  A   + +        + A  + ++A++ +GG+
Sbjct: 296 YTALSASRSYVYSVARSCDAGHINRKNCAAVLLFSA-------ENAMKMASDAVQILGGN 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GY  + +  R  R++    I  G+G + V  ++
Sbjct: 349 GYTNDYATGRLLRDAKLYEI--GAGTSEVRRIV 379


>gi|302905204|ref|XP_003049220.1| hypothetical protein NECHADRAFT_45046 [Nectria haematococca mpVI
           77-13-4]
 gi|256730155|gb|EEU43507.1| hypothetical protein NECHADRAFT_45046 [Nectria haematococca mpVI
           77-13-4]
          Length = 439

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 21/266 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A I +  ++  D  Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 160 LAVTEPSAGSDVAGIKTVAKRQGDK-YIVNGTKKWITNGVYADYCTAAVRTGGPGQSGIS 218

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+      G+  +R+ N   N S +T  +EF +     G LLG  N   G +   K+  
Sbjct: 219 ALVIPLDAKGVTRRRMDNSGINASGSTF-IEFDDVEVPIGNLLGKENEGFGIIMSSKVTD 277

Query: 317 Y----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    L  A + +   RV +  A  YA +R   G  LI+  +++  + D    I AA A 
Sbjct: 278 FNHERLWLATICLRLARVCVGHAHDYATKRETFGKKLIENQIIRAKLVDSGKKIQAAYAW 337

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----- 427
             +L  +     +          +A + K    +     + EA +  GG GY +      
Sbjct: 338 LEQLIWTRQRLTNHDGPDTLGASVA-MLKTLSARTLEETVREAQQIFGGLGYSKNGRGRV 396

Query: 428 -RSIARHYRESPANSILLGSGNAMVL 452
              I+R +R      +++G G+  +L
Sbjct: 397 VEQISRDFR-----VLVVGGGSEEIL 417


>gi|258563198|ref|XP_002582344.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237907851|gb|EEP82252.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 332

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 122/303 (40%), Gaps = 50/303 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + K W P++               T+      L+E   G+D  A+ ++  K   G Y
Sbjct: 67  SAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKATKTESG-Y 111

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K W  +S  +  FI+ A ++   G   +   L               K+G R+++
Sbjct: 112 KINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFL---------------KLGIRASS 156

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHY 338
           T  L F +     +   N+     +  K  I  L+   + ++     LA       A + 
Sbjct: 157 TCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYI 213

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-A 397
              R   G ++     M+  +A    DIAAA AL +  A        R +EA    +M A
Sbjct: 214 WNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAA--------RKKEAGQDFVMDA 265

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +  ++A  V + A+E +GG G++ E    + +R+S   +I  G+ N  +  +   
Sbjct: 266 AMAKLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKS 325

Query: 458 LEK 460
           L+K
Sbjct: 326 LQK 328


>gi|194434555|ref|ZP_03066813.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae 1012]
 gi|194417208|gb|EDX33319.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae 1012]
 gi|332097999|gb|EGJ02972.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 155-74]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 23/260 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPSAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATAL 372
            L+    A+ +      +  +A  YA + HV  G  I +  +++   A +A+ + +   +
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQ-HVQFGEAIGRFQLIQEKFAHMAIKLNSMKNM 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R
Sbjct: 297 LYEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISR 349

Query: 433 HYRESPANSILLGSGNAMVL 452
            +R+   + +  GS    +L
Sbjct: 350 FWRDLRVDRVSGGSDEMQIL 369


>gi|118618252|ref|YP_906584.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium ulcerans Agy99]
 gi|183980721|ref|YP_001849012.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium marinum M]
 gi|118570362|gb|ABL05113.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium ulcerans Agy99]
 gi|183174047|gb|ACC39157.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium marinum M]
          Length = 395

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 18/258 (6%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSS 237
           S E+      PM    +    GLTE   G+D AA+ ++ ++  DG  + L+G K W  + 
Sbjct: 120 SEEHKQRWLPPMAAGELIGCFGLTEPDVGSDPAAMKTRARR--DGSDWVLNGRKMWITNG 177

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D  I+ A  E  +  F+VP         G     + +K+  R++ T EL   +    
Sbjct: 178 SIADVAIVWAATEEGIRGFVVPT-----ETAGFAANTIHHKLSLRASITSELVLDDVRLP 232

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
               L  +TG    +  L      I+  ++   R +   A+ YA+ R   G  +    + 
Sbjct: 233 AEAMLPGATGVRGPLTCLSEARYGIVWGAMGAARSAWQCALDYAKERTQFGRPIAGFQLT 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  + D+A+++     L+ +L    D    R E+ ++ ++         C+ A  +    
Sbjct: 293 QAKLVDMAVELHKGQLLALQLGRLKDSVGLRPEQVSFGKLNNTREAIKICRTARTI---- 348

Query: 416 MECIGGSGYIEERSIARH 433
              +GG+G   E  + RH
Sbjct: 349 ---LGGNGISLEYPVIRH 363


>gi|126737980|ref|ZP_01753710.1| putative acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126721373|gb|EBA18077.1| putative acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 383

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA      QV+ +
Sbjct: 118 MGVTEPATGTDTTRIKTTARRNGD-RYIVNGQKVWISRVQHSDLMILLARTTPFDQVKKK 176

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
              +  FLV   L++   NGL    + N + + +N   EL F N               F
Sbjct: 177 SLGMSVFLVD--LKEAIGNGLDVNPIPNMVNHETN---ELFFDNLEIPAENLIGKEGMGF 231

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  LN         + LI    A   +        +   Y + R V G  +     +
Sbjct: 232 RYILDGLNAE-------RTLI----AAECIGDGFWFTDKVCAYVKEREVFGRPIGQNQGV 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA+  +++ AA  + FR    FD  +    EA  A       KY   K +       
Sbjct: 281 QFPIAEAKIELEAANLMRFRACQLFDRGQPCGTEANMA-------KYLAAKASWEAANAC 333

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+  E  + R +RE+
Sbjct: 334 LQFHGGFGFANEYDVERKFRET 355


>gi|77165043|ref|YP_343568.1| Acyl-CoA dehydrogenase [Nitrosococcus oceani ATCC 19707]
 gi|254433673|ref|ZP_05047181.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Nitrosococcus
           oceani AFC27]
 gi|76883357|gb|ABA58038.1| Acyl-CoA dehydrogenase [Nitrosococcus oceani ATCC 19707]
 gi|207090006|gb|EDZ67277.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Nitrosococcus
           oceani AFC27]
          Length = 639

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCF 256
           L+E   G+D +   ++ +   DG  Y L+G K W  S+ +S  F +LA+    + R G  
Sbjct: 177 LSEPNVGSDASGQETRCKLSEDGQFYILNGEKKWASSAALSGLFTVLAKQKIQDPRTGKE 236

Query: 257 --LVPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306
              V  L+      G+  Y R ++K G R      + F        N        LNV+ 
Sbjct: 237 KDQVTALICTPDMAGIDIYSRNRSKCGIRGTWQARIRFRDVKVPRENLLHQEGKGLNVAL 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  +  +    A   V     +  +A+ +A+ R+  G  L D   ++  IA +A + 
Sbjct: 297 TCLDYGRCTL----AAGMVGAAATAYEQAVKWAQYRYQFGRPLADFEQIQAKIASMAANC 352

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A+ +      D    R +E     +   I K +C ++   V+ +A++ +GG  Y+ 
Sbjct: 353 YAMEAMLYMTTGMLD----RHDEDIM--LETGICKVFCSEIGYRVVDDALQIMGGESYMT 406

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  + R +R+S  N I+ G+   M+
Sbjct: 407 ENEVERLWRDSRINLIVEGANEVML 431


>gi|330809778|ref|YP_004354240.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377886|gb|AEA69236.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 383

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE + G++   + ++ + + DG + ++G K F+S+   +   I+ A  +  +G      
Sbjct: 126 LTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPELGKKGISA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           FLVP         G    R ++K+G R++ T  +  SN     + + N+     + + I 
Sbjct: 185 FLVPT-----DTPGFIVDRTEHKMGIRASDTCAVTLSNC---TIPEANLLGARGKGLAIA 236

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDIAAA 369
           L  L+   + ++   + +A A   A   +    +  D+P+++       +AD+   I A 
Sbjct: 237 LSNLEGGRIGIAAQALGIARAAFEAALAYARDRVQFDKPIIEHQSIANLLADMHTRINAT 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      K    EA+ A++ A        +MA  V + A++  GG GY+E+  
Sbjct: 297 RLLILHAARLRSAGKPCLSEASQAKLFAS-------EMAEKVCSSAIQIHGGYGYLEDYP 349

Query: 430 IARHYRESPANSILLGS 446
           + R+YR++    I  GS
Sbjct: 350 VERYYRDARITQIYEGS 366


>gi|319441042|ref|ZP_07990198.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 415

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 109/251 (43%), Gaps = 11/251 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPR 260
           LTE+  G+D   + ++  +  D  + L+G K F+++     ++ ++A  +   G   +  
Sbjct: 156 LTEREAGSDAGGMKTKAVRDGD-EWVLNGSKCFITNGSRATWVTVMAVTDPEAGSRGISA 214

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G     L++K+G + + T EL F +    +  D  +          L  LD 
Sbjct: 215 FMVHKDDPGFRVGGLEHKLGIKGSPTAELYFEDCR--IPADRMIGEEGTGFKTALQTLDH 272

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    + +A+     A+ Y + R   G  +      +  +AD+ + I AA  + + 
Sbjct: 273 TRPTIGAQALGIAQGAFDAAVEYVKERKQFGKPIAAFQNTQFTLADMKMKIDAARLMIYT 332

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ +  +  +E+     +MA  +K +   +A  V  +A++ +GG GY  +  + R  R
Sbjct: 333 AASNAE--RGVAEDGGKLGLMAAGSKAFASDIAMEVTLDAIQLLGGYGYTRDFPVERMMR 390

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 391 DAKITQIYEGT 401


>gi|254773799|ref|ZP_05215315.1| FadE12_1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 388

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 47/266 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
            V +  G+TE   G D + IT+  ++  D  Y ++G K ++S  M SD  ++L + +   
Sbjct: 119 QVHVCFGVTEPGAGLDTSRITTFAKRDGD-RYIVNGRKVWISKAMESDKILLLTRTQAYD 177

Query: 252 -------------------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEF 291
                              RV    + ++  +  S N L    L+  + +R       E 
Sbjct: 178 EVTKKTDGMTLFITDLDRSRVDIRPIRKMGRNAVSSNELFIDNLEVPVEDRIG-----EE 232

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F ++L  LN         ++LI    A  ++   RV+L +A+ Y   R V G  +  
Sbjct: 233 GKGFQYILDGLNPE-------RMLI----AAEALGIGRVALDKAVKYGNEREVFGRPIGM 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD    + AA  +  +    +D  K    EA  A       KY C       
Sbjct: 282 NQGLQFPLADSLARLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADAGFTA 334

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
             +A++  GG GY EE  I R++RE+
Sbjct: 335 ADQALQTHGGMGYAEEYHITRYFREA 360


>gi|110834563|ref|YP_693422.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Alcanivorax borkumensis SK2]
 gi|110647674|emb|CAL17150.1| Acyl-CoA dehydrogenase, middle domain [Alcanivorax borkumensis SK2]
          Length = 401

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +  ++  D  Y L+G K F++S   +D  ++ A ++ ++G   +
Sbjct: 132 MAITEPGCGSDSAAIRTTAKQDGDH-YILNGEKIFVTSGERADCVVVWASLDPKLGRAAI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST-----GPVE 310
              + D    G+   RL+ K+G R++ T  + F +       LLG   + T     G +E
Sbjct: 191 KSFVVDWGTPGMELARLEKKLGIRASDTAAINFVDCRVPAENLLGTPEIDTKKGFAGVME 250

Query: 311 DMK------ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                      + +  A  S+  ++  L ++I+Y   + V     ++  + K     +  
Sbjct: 251 TFDNTRPLVAAMAIGCAKASLERIKELLKDSINYDYSKPVDNCSAVEAEIYK-----MEA 305

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D  AA  L+ + A   D  K+ + EA+       I+K    ++  A+    +E  G  GY
Sbjct: 306 DWEAAYWLAVKAAWMADNKKANTLEAS-------ISKAKAGRVGNAITLRCVELAGSLGY 358

Query: 425 IEERSIARHYRESPANSILLGS 446
            E+  + +  R+S    I  G+
Sbjct: 359 TEDELLEKWARDSKILDIFEGT 380


>gi|24215842|ref|NP_713323.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656858|ref|YP_000944.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24197040|gb|AAN50341.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600094|gb|AAS69581.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 418

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 43/277 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+      +   L+E   G+D+  +++   K  D        +W      + A+ + A  
Sbjct: 145 PVVDGEYGVSFCLSEPGAGSDVPGMSTTAVKKGDKWVINGTKQWITGGGSAGAYTVFAYT 204

Query: 250 E-GR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------- 293
           + GR    V CF V R        GL   + ++K+G R++ T ++ F +           
Sbjct: 205 DKGRGTRGVSCFYVKR-----DTPGLTVGKKEDKLGIRASDTRQIIFEDCAVEEANMIGK 259

Query: 294 -TFGFL--LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
              GF+  L  LN S   V           A M V   + +L  A  YAR+R   G  + 
Sbjct: 260 ENLGFIYALQTLNASRPYV-----------AAMGVGVAQAALDYASKYARQREQFGSKIS 308

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAP 409
               ++  +AD+++ +  +  +++  A   D    R  + +A A+  A  T   C     
Sbjct: 309 SFQAVQHMLADMSIGLETSRQVTYLAARMSDADDPRLPKYSAIAKAHASETAMKCA---- 364

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +A++  GG GY +E  + +  R++    I  G+
Sbjct: 365 ---LDAVQIFGGYGYTKEYPVEKLMRDAKILCIFEGT 398


>gi|301167960|emb|CBW27546.1| acyl-CoA dehydrogenase, short-chain specific [Bacteriovorax marinus
           SJ]
          Length = 379

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/254 (18%), Positives = 115/254 (45%), Gaps = 22/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   GTD  ++ +  +   D  Y ++G K F+++   ++  ++ A+         +  
Sbjct: 122 LSEPNAGTDAGSLITFAEDKGD-YYEITGTKNFITNGKEANIAVVFAKTTKTDNYKGISA 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            + +    G    + ++K+G + ++T ++ F         LLG L    G   +      
Sbjct: 181 FIVETDTAGYEVMKCEDKLGIKGSSTAQISFDKVRVPKENLLGTLEKGFGIAMNT----- 235

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372
           LD   + ++   + +++A     +++ +  +   +P+     ++  +AD++  IAA+  L
Sbjct: 236 LDGGRIGIASQALGISQAAFDYAKKYSNERVQFGKPLHALQAIQFMLADMSTKIAASRLL 295

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  +   D  ++ S ++A A++ A  +  W       +  +A++  GG+GY +E  + R
Sbjct: 296 IWEASRRKDNNETYSLQSAQAKLFAAESAMW-------ITTKAIQVCGGNGYTKEYPVER 348

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 349 FFRDAKITEIYEGT 362


>gi|307592218|ref|YP_003899809.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
 gi|306985863|gb|ADN17743.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
          Length = 1211

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           LLG++N      E+  +L +L  A +SV G M+      + YA RR VS G L+D P + 
Sbjct: 832 LLGEVNKGMDVAEEAMLLAHLCMASLSVGGGMKRCAQLMLRYANRRQVSTGRLLDNPTIL 891

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             ++++ + I     L  +L    DE     +E      +      W          + +
Sbjct: 892 AVLSELTIKITLIQNLLNQLVTVLDEEDYPPKEIGMMLKILSTDYLWQAS------DDLV 945

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           E +GG GY+E     +  R+     I  G+   M + V
Sbjct: 946 ETLGGRGYMENNIAPQIMRDCRMLRIGEGANEIMTITV 983


>gi|294952947|ref|XP_002787527.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239902533|gb|EER19323.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 427

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 22/278 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248
           P  +    I L +TE   G+D+A I +  +  +DG  Y +SG K ++++ +   +  +A 
Sbjct: 146 PCLRGEKKICLCITEPYAGSDVANIRTTAKLSADGKHYIVSGEKKWITNGIFADYFSVAV 205

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
             G VG   +  LL +    G+   R++ + G   + T  +EF++       L+G  N  
Sbjct: 206 RTGGVGMKGISMLLIERDMPGVKTTRMECQ-GVWPSGTTFVEFNDVKVPVENLIGREN-- 262

Query: 306 TGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               E  ++++Y            +    RV   E+  YA++R   G  L++ PV++  +
Sbjct: 263 ----EGFRVIMYNFNHERWGFVAQAARLSRVLYEESFKYAQKRRTFGKTLMEHPVIRWKL 318

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A  I         + +  +         A    +A + K    K+      EA +  
Sbjct: 319 AEMARQIEGVQYWLESVTHQMNVMPWGESMTALGGTLA-LMKAHSTKVFEYCAREAAQVF 377

Query: 420 GGSGYIEE---RSIARHYRESPANSILLGSGNAMVLDV 454
           GG+ Y        + R YR+  A +I  GS   ++LD+
Sbjct: 378 GGNAYTRSGLGEKVERLYRDVRAYAIPGGS-EEILLDL 414


>gi|21221493|ref|NP_627272.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256787320|ref|ZP_05525751.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771215|ref|ZP_06530593.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|6465864|emb|CAB61531.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans]
 gi|14970937|emb|CAC44516.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289701414|gb|EFD68843.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 385

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 21/276 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           S E       P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ 
Sbjct: 109 SEELKKKYMTPLAKGDGMFSYCLSEPDAGSDAAGMKTRAVRDGD-FWVLNGVKRWITNAG 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +S+ + ++A  +       +   + + S  G+ +   + K+G + + T E+   N    +
Sbjct: 168 VSEYYTVMAVTDPDKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVR--I 225

Query: 299 LGDLNVS---TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             D  +    TG    MK L   D   ++++   + +A+     A  Y + R   G  + 
Sbjct: 226 PADRMIGAEGTGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIA 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+A+ I AA  L++  A     AKS+  ++          K +   +A  
Sbjct: 283 DFQGIQFMLADMAMKIEAARQLTYAAA-----AKSQRGDSDLT-FQGAAAKCFASDVAME 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           V  +A++ +GG GY  +  + R  R++    I  G+
Sbjct: 337 VTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|331215135|ref|XP_003320248.1| medium-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
 gi|309299238|gb|EFP75829.1| medium-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 359

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 120/277 (43%), Gaps = 33/277 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           +TE   G+D+A I +Q  K  +  + L+G K W  +   +  + +LA+   E  V   + 
Sbjct: 90  VTEPGAGSDVAGIKTQAVKTGND-FVLNGSKMWITNGGKASWYFVLAKTDPEAPVHKSMS 148

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----------------SNTFGFLLGD 301
             +++  SP  L  ++  N +G R + T ++ +                 SN  G +   
Sbjct: 149 GFIVDANSPGVLVGKKEIN-MGQRCSDTRQITYTNEQNHTNQFEDVVVPSSNLVGAMGEG 207

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             V+    +  + L+    A  +V   + +L+EA+ YA+ R   G  +I+   +   +A+
Sbjct: 208 FKVAMAAFDITRPLV----ASGAVGLAQRALSEAVKYAQTRKTMGKPIIEHQSVSHMLAE 263

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + + AA A+ ++     D     +  A+ A+ ++        ++A      A++  GG
Sbjct: 264 MTIGVEAARAMVWKSTFIKDTGHRNTYYASIAKCLS-------SEVAVRNAGMAVQIFGG 316

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G+  E  + + YR+S   ++  G+     L +   L
Sbjct: 317 AGFNTEYPVEKLYRDSKIFTLYEGTSQIQRLIISKFL 353


>gi|302898864|ref|XP_003047932.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728864|gb|EEU42219.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 438

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 24/254 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251
            G+TE   G D   + +  +K SDG Y ++G K W   + ++   I+LA+        + 
Sbjct: 163 FGVTEPNAGLDTLRLGTTAKKNSDGSYSVTGQKIWITCAQVASKMILLARTTPLEEVKKP 222

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G  L    L    P GL  +++K K+G R+    E+ F N +      L    G    
Sbjct: 223 SEGLSLFSIDLNRDQP-GLDLRKIK-KMGGRAVDANEVFFDN-YQIPANSLIGEEGKGFK 279

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           M IL  +++    ++G  + L      +A  YAR R V    +     +   +AD  + +
Sbjct: 280 M-ILHGMNAERCLLAGEALGLGYAALKKASEYARERVVFKRQIGMNQAIAHPLADAYMKL 338

Query: 367 AAATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A   ++  A  +D++K+    R +E   A   A   KY   + A      A+   GG 
Sbjct: 339 EGAKLATYHAARLYDQSKTDSSIRQDEVGVA---ANSAKYMAAEAAFTACERAVLTHGGM 395

Query: 423 GYIEERSIARHYRE 436
           GY  E  + R +RE
Sbjct: 396 GYAMEYDVERWFRE 409


>gi|167463021|ref|ZP_02328110.1| possible acyl-CoA dehydrogenase (NADP(+)) [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383393|ref|ZP_08057176.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152297|gb|EFX45120.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 23/266 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P+      +G   L+E   G+D   + +  +K  +  Y L+G K W   + ++D F++ A
Sbjct: 112 PLMAQGAKMGAFALSEPNVGSDAKNVQTSYRKEGN-RYILNGRKKWISFAAIADFFLVAA 170

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             E G+   F+V R  E     GL    +K  +GNR     E++ +N       +L  S 
Sbjct: 171 TNEAGQASTFIVERERE-----GLHTIPIKGLLGNRGVHIAEIQLNN-IEIPEENLFGSE 224

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
           G      +   LD    S++    ++A       + Y+R R   G  L +  ++K  I D
Sbjct: 225 GGGFTYVVSTALDHGRYSIAWAGAAIAAEALEAMVTYSRTRSQFGEKLHNFQLVKGMIGD 284

Query: 362 IALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               + AA AL  R      E    S  E A       I KY+  K+A  V ++ ++  G
Sbjct: 285 AVTKVHAARALCLRTGERRKEGHDESIHETA-------IAKYFASKIAVEVTSDTVQIHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G+G        R +RE+    I+ G+
Sbjct: 338 GNGCYNAYPAERLFREAKVLEIIEGT 363


>gi|33603919|ref|NP_891479.1| isovaleryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33568895|emb|CAE35309.1| isovaleryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 392

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGAGSDVVSMRLRADRKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG +N   G V  +   
Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFEDCEVPEENVLGQVN---GGVRVLMSG 243

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S   +  M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERAVLSGGPLGIMQGVMDVVVPYIHDRKQFGQAIGEFQLIQGKIADMYSVLQASRAF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D+  +           A I   +  + A  +  E ++ +GG+GYI E  + R
Sbjct: 304 CYAVGRNLDQLGAGHVRQVRKDCAALIL--YTAEKATWMAGEGVQILGGNGYINEYPVGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 MWRDAKLYEIGAGT 375


>gi|294637530|ref|ZP_06715815.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda ATCC 23685]
 gi|291089311|gb|EFE21872.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda ATCC 23685]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F+ SS  +   +++A+        +   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYLVVMARDGASPDKAIYSE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++        VELE  + FG      N      +  +
Sbjct: 183 WFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDLFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +S+        A + KY+C   +  V+  AM+ +GG G   +  I R 
Sbjct: 293 --MKNMLLEAAWKSDNGLMTSGDAAMCKYFCANASFEVVDSAMQVLGGVGIAGDHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|254453585|ref|ZP_05067022.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198267991|gb|EDY92261.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 406

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 31/246 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + ++  K   G Y +SG K W  ++P++D F++ A+ +   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTRAVKTPTG-YKISGAKMWISNAPIADVFVVWAKSDEHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F++ + +      GL   ++  K+  R++ T E+           LL ++    GP    
Sbjct: 207 FILEKGM-----TGLTAPKIGGKLSLRASVTGEVVMDGVEVGEDALLPNVQGLKGP---- 257

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   ++   +  AE     A+ Y   R   G  L    + ++ +AD+  +I 
Sbjct: 258 --FGCLNRARYGIAWGVIGAAEFCWHAALRYGLDRKQFGKPLAQTQLFQKKLADMQTEIT 315

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                + +L    D  K+       A  M  + K   C  A  +   + +  GG+G  +E
Sbjct: 316 LGLQSALQLGRLMDAGKA-------APAMISMMKRNNCGKALDIARASRDMHGGNGISDE 368

Query: 428 RSIARH 433
             I RH
Sbjct: 369 FHIMRH 374


>gi|126343227|ref|XP_001377239.1| PREDICTED: similar to Acyl-CoA dehydrogenase (3J649) [Monodelphis
           domestica]
          Length = 364

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 37/342 (10%)

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSRE 182
           F P+       +  +    MA+ E G + S  V++A ++   M TP + +  + ++  R 
Sbjct: 29  FSPLAEYGGQGLDFSYQIAMAE-ELGTIRSMGVSTAILLQTSMATPALERFGSEELKQRF 87

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241
             P+         VA  LG++E   G+D++ I ++  K+  G Y ++G K W  S   +D
Sbjct: 88  LVPSIAGDF----VAC-LGVSEPGAGSDVSNIQTRA-KLRGGDYIINGSKMWTTSGSQAD 141

Query: 242 AFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
              +LA               VP  L      G+   +  +K+G  ++ TV++ F +   
Sbjct: 142 WMCLLANTGAGPPHLNKSLLCVPMNLA-----GIHVSKSIDKLGLNASDTVQVFFEDVRV 196

Query: 296 --GFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
              FL+G+     G     ++L +    + +  M ++ M   + + I YAR R +    L
Sbjct: 197 PRKFLIGE----EGRGFHYQMLQFQEERMSATAMVLTPMADIIRQTIDYARGRVLFNKPL 252

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +D  V+   +A++A ++    +L +R           +E  +  ++ A        ++  
Sbjct: 253 LDHQVVHFRLAELATELELLRSLLYRAVAQHTRGLDVTELVSMGKLKAG-------RLCR 305

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            V    ++  GG GY  +  ++R +R+    SI  G+   M+
Sbjct: 306 EVTDSCLQFWGGQGYTHKALVSRLFRDLRVTSIGGGADEVML 347


>gi|325000643|ref|ZP_08121755.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 33/282 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +   A    LTE   G+D+ A+ +      DG + L+G K F S+ P +D  +++A+
Sbjct: 127 PVVEGDRACCFSLTETDAGSDVRAMRTTATPDGDG-WRLTGKKVFSSAGPFADFSVLVAR 185

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----SNTFGFLLGDLN 303
           + G    +    L++  +P            G    + +EL+          G +   L 
Sbjct: 186 MAGTEDTYSA-FLVDLDAPGCTVLPGEVPLSGQHIESDIELDGCYVGPDQLLGSVGDGLT 244

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  G V   ++L         +   R  +   + +AR R V GG L D   ++  +AD+A
Sbjct: 245 IGLGRVTTNRLL----HCPTILGHARRVIQLTVEHARTRRVFGGTLADLQSIQHKLADMA 300

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA-----VIAEAMEC 418
               AA ++++      D  +            AP T+ + CK+  A     +  EAM+ 
Sbjct: 301 TTYYAARSMTYDALADLDAGR------------APRTEAFMCKLFVAENVFRIADEAMQI 348

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSG----NAMVLDVLN 456
            G +G ++   I   +R      IL GS     N +  D+L 
Sbjct: 349 HGKAGMVQGSEIEWMFRRLRMFRILTGSSEIQKNGIAKDLLR 390


>gi|259417653|ref|ZP_05741572.1| short-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
 gi|259346559|gb|EEW58373.1| short-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
          Length = 387

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  +T+  +   D  + L+G K F+S + ++D A + +A  E       
Sbjct: 123 LAMTEPGAGSDLRGMTASARTDGDD-WILNGTKHFISHADVADFAIVFMATGEEETPRGK 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG++N   
Sbjct: 182 KKKITAFFVDK----GTP-GFTVRDGYRNVSHRGYTNQVLEFDDCRLPSSAVLGEVNKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  A+ YA  R   G  +     +   +AD+A ++
Sbjct: 237 EVANTWLGATRLQVAATCLGRAERALQHAVEYAAERKQFGQQIGKFQGVSFKLADMATEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+      + + A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAANLLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|195377100|ref|XP_002047330.1| GJ13373 [Drosophila virilis]
 gi|194154488|gb|EDW69672.1| GJ13373 [Drosophila virilis]
          Length = 581

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 47/312 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + PK+ S E             V     LTE   G+D  +I S+  K 
Sbjct: 116 ILLYGTPEQKAKYLPKVASEE-------------VYAAFALTEPSSGSDANSIRSRAVKS 162

Query: 222 SDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
           +D   Y L+G K W  +  +++   + AQ E           +V  F+V R     S  G
Sbjct: 163 ADNKYYILNGSKIWISNGGLAEVMTVFAQTEQIDKKTGEKKDKVTAFIVER-----SFGG 217

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS------AI 322
           +     + K+G +++ T E+ F +     +   NV     E  K+ +  L+S      A 
Sbjct: 218 VTSGPPEKKMGIKASNTTEVYFEDV---KIPIENVLGKEGEGFKVAVNILNSGRFGMGAT 274

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           MS + M+  +  A  +A  R   G  + +   ++  +A + +   A  +++F ++ + D 
Sbjct: 275 MSGT-MKKCIEIATAHANSRVQFGQKIKEFGTIQEKLAKMNILQYATESMAFMISQNMD- 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             S S++     +   I+K +  + A  V  EA++ +GG G+++E  + R  R+     I
Sbjct: 333 --SGSQD---YHLETAISKIYSSESAWHVCDEAIQILGGMGFMKETGLERIMRDLRIFRI 387

Query: 443 LLGSGNAMVLDV 454
             G+   + L V
Sbjct: 388 FEGTNEVLRLFV 399


>gi|94495191|ref|ZP_01301772.1| putative acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425457|gb|EAT10477.1| putative acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 387

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 32/262 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           PM +  + + L +TE  GGTD+  A+ +  +K+ DG + ++G K W   +  +D  ++LA
Sbjct: 115 PMAQGKLRVSLSMTEPDGGTDVLGAMKTHAEKV-DGGWKMNGAKMWTTGAKAADRLLVLA 173

Query: 248 QVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           + +         +  F V     D    G+    L  K+G R+  + E+ + + F   + 
Sbjct: 174 RTDKNAEKKHHGLTMFFV-----DAKSPGITASLLP-KLGMRAMGSCEVHYEDVF---VP 224

Query: 301 DLNVSTGPVEDM-KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPV 354
           D +V   P +    +L  L++  + V    +      L +A+ Y  +R   GGI+    +
Sbjct: 225 DEDVLGEPGQAWYAMLPTLNNERIMVGAQCLGAIDGVLEDALEYMLQRKAFGGIIGRFQI 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +ADIA        L + +A           EA   +++A        + A      
Sbjct: 285 LQHYVADIATWQKLTELLLYNVAWMQSNGMPCGTEANMLKMVA-------TENAVKAADL 337

Query: 415 AMECIGGSGYIEERSIARHYRE 436
            ++ +GG GY  E  + R++R+
Sbjct: 338 GIQILGGMGYSAETDMQRYWRD 359


>gi|325954035|ref|YP_004237695.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323436653|gb|ADX67117.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 600

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 34/284 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  ++  +D FI+ A+++    +  F+
Sbjct: 150 LTEPEAGSDANSGKTKAVLSEDGKEYIITGQKMWITNAGFADIFIVFARIDDDKNITAFI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310
           V +   D +  G      ++K+G  S++T ++ F+       N  G   G   ++   + 
Sbjct: 210 VEK---DKAGEGFSLGEEEDKLGIVSSSTRQVFFNEVRVPVENLLGERNGGFKIAMNALN 266

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +I +        +   R  L  ++ YA  R      +     ++  +AD+A+    + 
Sbjct: 267 VGRIKL----GAACLDAQRRVLNNSLQYASERKQFNVSINTFGAIQEKLADMAVATFTSE 322

Query: 371 ALSFRLANSF--------------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           A ++R A                 +EA+ +  E  YA I A I K W  + A     E +
Sbjct: 323 AGAYRAAKDIQDAIEDNIAKGMPHNEAELKGIEE-YA-IEASILKVWISEAAQKASDEGI 380

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GY +E  +   +R++  + I  G+     L  +++L K
Sbjct: 381 QIYGGMGYSKEMPMEAAWRDARISRIYEGTNEINSLLCISMLVK 424


>gi|319764991|ref|YP_004128928.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330827186|ref|YP_004390489.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119552|gb|ADV02041.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312558|gb|AEB86973.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 384

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 48/260 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252
             LTE   G+D  A+ +   +  D  Y ++G K F++ +P+++ F + A+ + +      
Sbjct: 122 FALTEPDAGSDATALRTTAVRDGDH-YVITGSKCFITNAPIANLFTVFARTDPQSKGARG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGP 308
           V  FLV R    G+P GL       K+G   +   E+        +L  + V      G 
Sbjct: 181 VTAFLVER----GAP-GLSTPPAYRKMGQHGSPVGEV--------VLDQVRVHESAIVGG 227

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMK 356
           VE         +A+ +++  R++LA            E +  A+ R   G  + +  +++
Sbjct: 228 VEGQG----FKTAMKALNKQRINLAGLCVGPAIRLVDEMVRRAQTRRQFGQPVGEFQLVQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + IA+   ++ AA AL    A   D     + EA+       + K +  +M   V   A+
Sbjct: 284 QMIAESNTEVHAARALVLETARKRDAGADVTMEAS-------MCKLFASEMCGRVADRAV 336

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GGSGYI +    R YR+
Sbjct: 337 QLFGGSGYIADNVAERFYRD 356


>gi|296282142|ref|ZP_06860140.1| acyl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 391

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 29/267 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-------EG 251
            GLTE   G+D AA+ +   K  +G Y L+G K +++ +P +   +++A+          
Sbjct: 124 FGLTEPGSGSDSAAMQTTAVKDGNG-YRLNGSKRYITNAPFAKLGLIMARTSKEPLPKNA 182

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FLV     D    G+   +   K+G   +   ++   +    + GD  +     + 
Sbjct: 183 HVSAFLV-----DMEKAGVTVGKPDKKMGQEGSQIADIYLDDVH--VDGDALLGGEEGQG 235

Query: 312 MKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +  ++ LD+  +SV+       R  L  A+ YA+ R   G  +    +++  +AD   +
Sbjct: 236 FRTAMMSLDNGRLSVAAASAGYARRILDTAMRYAQDRKAFGEPINQFQLIQAMLADSESE 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  +         +A ++ +    + + A  TK +  +M   V    ++  GG+GY+
Sbjct: 296 IYAAECM-------LKDATAKVDADEPSLLPAASTKLFASEMCNRVADRCVQIHGGAGYL 348

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
            E    R YR+S   +I  G+   M L
Sbjct: 349 AEYEAERFYRDSRIYTIYEGTSQIMQL 375


>gi|296333431|ref|ZP_06875884.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675063|ref|YP_003866735.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149629|gb|EFG90525.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413307|gb|ADM38426.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 379

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--C 255
           LTE   G+D  ++ +   K  +G Y L+G K F+++   +D +I  A     +GR G   
Sbjct: 123 LTEPHSGSDAGSLRTTAIK-KNGKYVLNGSKIFITNGGAADIYITFALTAPDQGRHGISA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           F+V    E  +P G    + + K+G   + T EL F        N  G      N++   
Sbjct: 182 FIV----EKNTP-GFTVGKKERKLGLYGSNTTELIFDDAEVPEENLLGKEGDGFNIAMAN 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   +I I    A  ++     +L  A+ YA++R   G  +     +   +AD+A    A
Sbjct: 237 LNVGRIGI----AAQALGIAEAALEHAVAYAKQRMQFGRPIAANQGISFKLADMATRAEA 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  +   +  +EA+ A       K +    A     +A++  GG GY+++ 
Sbjct: 293 ARHLVYHAADLHNRGLACGKEASMA-------KQFASDSAVRAALDAVQIYGGYGYMKDY 345

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 346 PVERLLRDAKVTQIYEGT 363


>gi|220920335|ref|YP_002495636.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219944941|gb|ACL55333.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 391

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++ ++ +K  D  Y L+G K W  + P ++  ++ A+ +   G   +
Sbjct: 131 LAMSEPGSGSDVVSMRTRAEKRGD-RYVLTGSKMWITNGPEAETLVVYAKTDPAAGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFLIEKGMKGFSTAQKLDKLGMRGSDTCELVFEECEVPEENVLGEVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  L   + Y   R   G  + +  +++  +AD+ +   AA A
Sbjct: 250 ERAVL----AAGPLGIMQACLDVVLPYVHERKQFGQPIGEFQLVQGKLADMYVATNAAKA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAQACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|325104736|ref|YP_004274390.1| Glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
 gi|324973584|gb|ADY52568.1| Glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
          Length = 452

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 29/260 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQK  +    GLTE   G+  A   +   K     + L+G K W  ++  +D  I+ A+ 
Sbjct: 185 MQKLELIGSFGLTEPEVGSAAAGGLTVTAKREGNKWILNGQKKWIGNATFADVNIIWARD 244

Query: 250 --EGRVGCFLVPR----LLEDGSPNGLCYQRLKNKIGNRSNATV----ELEFSNTFGFLL 299
             + +V  F+V +       D   N +  + ++N +   +N  V     L+  N+F  + 
Sbjct: 245 LDDNQVKGFIVEKGNSGFKADKIENKMALRIVQNGLITLTNCEVTEENRLQNCNSFKDVA 304

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L ++   V           A M+V   R +   A+ Y R R   G  +    +++  +
Sbjct: 305 KVLRMTRAGV-----------AWMAVGCARGAYESALKYTRERIQFGRPIASFQLIQNHL 353

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            ++  ++ A   L +RL+   D  +   E A+ A++       +C      V++ A E +
Sbjct: 354 VEMLSNLTAMQTLVYRLSELQDNNQLTDEHASLAKV-------FCTLRMRDVVSRAREVM 406

Query: 420 GGSGYIEERSIARHYRESPA 439
           GG+G + E  +AR   ++ A
Sbjct: 407 GGNGILLEYDVARFVADAEA 426


>gi|300785766|ref|YP_003766057.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795280|gb|ADJ45655.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 378

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 20/251 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE  G  D   I ++ +  S G + L+GHK F L    +D  +++A+ E  +  F V
Sbjct: 130 LAVTEADGSWDPHRIATRAEVASPGGWALTGHKCFVLDGTTADLLLVVARTEAGLSLFAV 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R     +  G+  + L+     R+ A V L+ +     L+G        +E +  +  +
Sbjct: 190 ER-----TAPGVRAESLRTLDATRAQARVMLDAAPA--TLVGADGAGERLLETVLDVASV 242

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI--ALDIAAATALSFRL 376
             A     G R  L  +  YAR RH  G  +     +K   ADI   +++A ATA     
Sbjct: 243 CLAAEQAGGARRVLETSAEYARTRHQFGRPIGSFQAVKHKCADILVQVELAEATAREAAR 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYR 435
            ++ D A  R+  AA            CC  A    A E ++  GG G+  E     H+R
Sbjct: 303 LHTADPAGFRAAAAAAHA---------CCSRAYVFAAMENIQVHGGIGFTWEHPAHLHFR 353

Query: 436 ESPANSILLGS 446
            + +  +L G 
Sbjct: 354 RAKSAQLLFGG 364


>gi|238061948|ref|ZP_04606657.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237883759|gb|EEP72587.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 384

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 37/271 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG---- 251
           G GLTE   G+D     ++     S   + ++G K F+++  +D  A + +  V G    
Sbjct: 122 GFGLTEPGTGSDAGGTRTRAVLDPSTDEWVINGSKAFITNSGTDITALVTVTAVTGTRPD 181

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305
               +   +VP     G+P G       +K+G  ++ T EL F +       LLG+    
Sbjct: 182 GSKELSTIIVP----SGTP-GFTVAPGYSKVGWNASDTHELTFDDCRVPAANLLGERG-- 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
            G  + ++IL   D   ++++ + V LA     E+I YA +R   G  + +   ++  IA
Sbjct: 235 RGFAQFLRIL---DEGRIAIAALAVGLAQGCVDESIKYASQRQAFGQPIGNYQAIQFKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D  +++ A TA   RLA  + +A +R       +  A I K     +A     EA +  G
Sbjct: 292 D--MELKAHTA---RLA--YYDAAARMLTGEPFKRQAAIAKLHASTIAVDNAREATQIHG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
           G G++ E  +AR +R+S    + +G G + V
Sbjct: 345 GYGFMNEYPVARFWRDS--KILEIGEGTSEV 373


>gi|194374041|dbj|BAG62333.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 24/200 (12%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP         GL   + ++K+G R ++T  L F +     +   ++   P    
Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD   + ++   + +A+     A+ YA  R   G  L    V++  +AD+AL +
Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAVSYAENRMAFGAPLTKLQVIQFKLADMALAL 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A   D  K   +EAA A   A          A A+  +A++ +GG GY+ 
Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAASEA----------ATAISHQAIQILGGMGYVT 367

Query: 427 ERSIARHYRESPANSILLGS 446
           E    RHYR++    I  G+
Sbjct: 368 EMPAERHYRDARITEIYEGT 387


>gi|163854570|ref|YP_001628868.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258298|emb|CAP40597.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 34/253 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYC-LSGHKWFLS-SPMSDAFIMLAQVE--GRVGC 255
             LTE   G+D  A+ ++   + DG Y  +SG K F++ +P++D F + A+ +   R   
Sbjct: 122 FALTEPEAGSDATALKTRA--VRDGAYYEISGRKCFITNAPIADLFTVFARTDPDSRGSA 179

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +   L+E  +P GL       K+G   +   E+        +L  + V    +      
Sbjct: 180 GISAFLVERDTP-GLATPPAYRKLGQHGSPVGEV--------VLDRVRVHESAIVGGTEG 230

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               +A+ +++  R++LA            E +  A  R   G  + +  ++++ IA+  
Sbjct: 231 RGFRTAMKALNKQRINLAGLCVGPAIRLVREMVRRAHERKQFGQAIGEFQLVQQMIAESN 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA AL    A   D+    + EA+       + K +  +M   V   A++  GG+G
Sbjct: 291 TAVHAARALVLETARKRDDGVDVTLEAS-------MCKLFASEMCGQVADRAVQVFGGAG 343

Query: 424 YIEERSIARHYRE 436
           YI    + R YR+
Sbjct: 344 YIAGNVVERFYRD 356


>gi|157147544|ref|YP_001454863.1| crotonobetainyl-CoA dehydrogenase [Citrobacter koseri ATCC BAA-895]
 gi|166991429|sp|A8ALR4|CAIA_CITK8 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|157084749|gb|ABV14427.1| hypothetical protein CKO_03344 [Citrobacter koseri ATCC BAA-895]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      +   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPIYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVNKLE-KLGLRMDSCCEINFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFDVVDSAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|94495216|ref|ZP_01301797.1| butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425482|gb|EAT10502.1| butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 387

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 30/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGR-- 252
           +  TE  GGTD+    +      DG + L+G K W  S+ ++D  +++A+    VE +  
Sbjct: 125 IAFTEPGGGTDLLGAMATTADRVDGGWRLNGEKIWSSSAHVADYLLVIARSDRGVEKKHQ 184

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F VP         G+    L  K+G RS  +  + F N    L+ D +V   P + 
Sbjct: 185 GLTLFWVPT-----KTPGVTITPLA-KLGMRSMGSCSVHFENA---LVADEHVLGEPDKA 235

Query: 312 MKILI-YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +L+  L++  + V    +      L +A+ Y ++R   GGI+     ++  +ADIA  
Sbjct: 236 WYMLLPTLNNERIMVGAFCLGVIDGVLEDALDYMKQRKAFGGIIGRFQSLQHYVADIATM 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 +    A+     ++   EA   ++MA        + A A     ++ +GG GY 
Sbjct: 296 QKTTELMLHYCAHKQSRGENVGVEANMLKLMA-------SENANAAADMGIQILGGMGYS 348

Query: 426 EERSIARHYRES 437
            E  + R++R+S
Sbjct: 349 AETDMQRYWRDS 360


>gi|326382764|ref|ZP_08204454.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198354|gb|EGD55538.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 396

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D+AAI ++  +  DG Y + G K +L++  +   +  ++   EG       +
Sbjct: 129 MSEPELGSDVAAIRTRAVREGDG-YVIDGQKMWLTNGGTSTLVAALVKTDEGADKPHRNL 187

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
             FLV  P    +  P G+      +K+G +   T EL F          L G      G
Sbjct: 188 TTFLVEKPAGFGEVVP-GITIPGKIDKMGYKGIDTTELIFDGYRAAASDILGGTPGKGFG 246

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + D   +  ++ A  +      S   A  YA++R   G  ++D   +   +A++A  + 
Sbjct: 247 HMMDGVEVGRVNVAARACGVALRSFELAARYAQQRQTFGKPIVDHQAIAFKLAEMATKVE 306

Query: 368 AATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AA  +   + RL +S D    R++      + A + KY   +    V  E+    GG GY
Sbjct: 307 AAHLMMVNAARLKDSGD----RND------VAAGMAKYLASEYCAEVTQESFRIHGGYGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 357 SKEYEIERLMREAP--FLLIGEGTSEI 381


>gi|222111209|ref|YP_002553473.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221730653|gb|ACM33473.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 619

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 68/321 (21%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSSPMSD-----AFIML 246
           L+E + G+ ++ IT++ +  +DG           Y L G+K ++SS   +       ++L
Sbjct: 161 LSEPQAGSSLSDITTRAE--ADGADFEVDPLGPRYRLRGNKMWISSGDHELTENIVHLVL 218

Query: 247 AQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
           A++ G  G           F+VP+ L D      G  N +    L +K+G R      L 
Sbjct: 219 AKIPGPDGKLVPGVKGISLFIVPKKLVDTDGQLTGERNDVALAGLNHKLGWRGTTNTLLN 278

Query: 291 F----------SNTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           F          +   G+L+G     L      + + +I I + +  + ++G   SL  A 
Sbjct: 279 FGEGRYPVRGGAGAIGYLVGRPGEGLKCMFHMMNEARIAIGMAATTLGLAGYYASLDYAR 338

Query: 337 HYARRRHVSGGI----------------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              + R V G                  LI    +KR +         A AL+   A   
Sbjct: 339 TRLQGRPVQGSTSAAGSAGKDASQPQVPLIRHADIKRMLLAQKSYCEGALALNLYCARLV 398

Query: 381 DEAKSRSEEAAY-AR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           DE ++   +AA  AR    ++ PI K W  +      + A++  GG GY  +  + +++R
Sbjct: 399 DEGRTGEPQAAQDARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWR 458

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           ++  N I  G+      D+L 
Sbjct: 459 DNRLNMIHEGTHGIQAADLLG 479


>gi|254429682|ref|ZP_05043389.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195851|gb|EDX90810.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 435

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 24/227 (10%)

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  +  +  ++ F++ AQ +     F+V     +G  +GL        +G R++
Sbjct: 224 YVLNGEKSLVPLAAEAEIFLVAAQTDNGPAVFIV-----EGGTDGLTAGE-DPAMGIRAS 277

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYA 339
               L+  N    +  D  +  G   D     ++D   ++   M +  ++A+      Y 
Sbjct: 278 GQRPLKLDNVR--IPADNRLGNG---DFDYRAFVDLGTLAWCAMAIGTSQAVLDYVGPYC 332

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +  +  +   IADIA+++ A   L++R A+  ++ KS   EA  AR +   
Sbjct: 333 NERTAFGEPISHRQSVAFMIADIAIELDAMRMLTYRAASRAEQGKSFQREAHLARTL--- 389

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   A  +  + ++ +GG G+ +E  + R YR+  A  +  G 
Sbjct: 390 ----VKDKAMKIGTDGVQLLGGHGFTKEYPVERWYRDLRAVGVAFGG 432


>gi|120402719|ref|YP_952548.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955537|gb|ABM12542.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D AA+ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAAAMRTRAKADGDD-WILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 193 FMVHIDDEGFTIGPKERKLGIKGSPTTELYFENC--RIPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     ++ Y + R   G  + +   ++  +AD+A+ + AA  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDASLEYVKDRKQFGKSISEFQAVQFMLADMAMKVEAARLMVYS 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A  +K     +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AA-----ARAERGEGNLGFISAA-SKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|68535361|ref|YP_250066.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68262960|emb|CAI36448.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 402

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 52/303 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE + G+D AA+ +   K+    Y L+G K F+++       ++ A V+   G    
Sbjct: 132 MAITEPQFGSDSAAVAATA-KLDGDEYVLNGEKIFVTAGERCTHVVVWASVDKSAGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR     +P G    RL++K+G RS+ T      N     +   N+   P  D K
Sbjct: 191 KSFVVPR----DTP-GFELVRLEHKLGIRSSDTAHFILDNV---RIPKENLLGSPEVDTK 242

Query: 314 -----ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID-------QPVMKRAIA 360
                ++   D+    V+ M V +A A +   R      G+ ID       QP       
Sbjct: 243 KGFGGVMATFDNTRPMVAAMAVGVARASLEKLREILTDAGVEIDYDAPAWNQPAAASEYI 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  ++ R     D  +  S+EA+  +  A        +MA  +   A+E  G
Sbjct: 303 RLESDWEAAYLMTLRAGWMADNKQPNSKEASECKAKA-------GRMATDLTLRAVEIAG 355

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
             GY E   + +  R+S             +LD+     +GT   +QL     ++LG S 
Sbjct: 356 AYGYSERDLLEKWARDSK------------ILDIF----EGTQQIQQLV-VARRELGLSS 398

Query: 481 KKV 483
           K++
Sbjct: 399 KEL 401


>gi|27382356|ref|NP_773885.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27355527|dbj|BAC52510.1| blr7245 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 53/265 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
            G+TE   GTD +++ +  +K  +  Y ++G K W   +  SD  ++LA      QV+ R
Sbjct: 123 FGVTEPTSGTDTSSLKTFARKEGNDSYIVNGQKIWTSRAEHSDLMVLLARTTPKEQVKKR 182

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  F+V   + +   NGL  + ++  +   ++AT E+ F++               F
Sbjct: 183 TDGLSVFIVD--MREAKNNGLEIRPIRTMM---NHATTEVFFTDMKVPAENLIGEEGKGF 237

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   V   +  +A+A +YA+ R V G  +     +
Sbjct: 238 RYILSGMNAE-------RILI----AAECVGDAKWFIAKATNYAKERSVFGRPIGQNQGI 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +       ++       EA  A+++A          A A    A
Sbjct: 287 QFPIAKAYASMRAAELMVKEATRKYEAGLDCGAEANMAKMLA----------ADASWEAA 336

Query: 416 MECI---GGSGYIEERSIARHYRES 437
             CI   GG G+ EE  + R +RE+
Sbjct: 337 NACIQTHGGFGFAEEYDVERKFRET 361


>gi|328958396|ref|YP_004375782.1| short chain acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674720|gb|AEB30766.1| short chain acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 362

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF-IMLAQV 249
           Q T    G   TE +GG+++   T++  K  D  + L+G+K  +++  +++ + ++L   
Sbjct: 98  QATHRIFGFSSTEPQGGSNVMGHTAKAVKEGDK-WILNGNKTMITNGGLAEVYCVLLKTS 156

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDL 302
              + CFLV     D    G  + + +  IG       E+   N         G +   +
Sbjct: 157 PTELSCFLV-----DEDMPGFKHGKREEFIGMNGTPVGEIFLENVVVGEEHLLGTIGQGV 211

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAIAD 361
            +      D +IL+   +A ++   + +    A+ YA++R       ID P+++  +I  
Sbjct: 212 EIGDNAHYDARILMGAIAAGITQHALTI----AVDYAKKREA-----IDTPIIQLHSIQT 262

Query: 362 IALDIAAA---TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
              +IA A   T L ++ A     AK + E  +YA++ A + K +  + +      A++ 
Sbjct: 263 KITEIAIAKENTQLLYQEA-----AKLKLEGKSYAKV-ATMAKSYGSRASVIAADHALQV 316

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +GG GY  E  +    R++ A  I  GS   M++++
Sbjct: 317 LGGYGYSREYPVEHLIRDARALQIAEGSLEKMMIEI 352


>gi|149728394|ref|XP_001489295.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 9 [Equus
           caballus]
          Length = 621

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ---------VE 250
           LTE   G+D A+I ++     D   Y L+G K W  +   ++ F + A+         V+
Sbjct: 180 LTEPASGSDAASIQTRATLSEDKKHYVLNGSKVWITNGARANIFTVFAKTSIVDSDNSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSDTCEVHFENTRVPVENVLGEVGGGFK 294

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 295 VAMNILNSGRF-----SMGSAVAGMLKKLIEMTTEYACMRKQFNRSLSEFGLIQEKFALM 349

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D+      S EAA  ++ +    + C       ++EA++  G
Sbjct: 350 AQKAYVMESMAYLTAGMLDQPGFPDCSIEAAMVKVFSSEGAWQC-------VSEALQVFG 402

Query: 421 GSGYIEERSIARHYRES 437
           GSGY+++  + R  R++
Sbjct: 403 GSGYVKDCPLERILRDA 419


>gi|330952819|gb|EGH53079.1| Acyl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 33/279 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---- 236
           D    A ++K +    +G   LTE   G++   + ++ +   D  + ++G K F+S    
Sbjct: 105 DEQKHAWLEKLATGRAIGCFCLTEPHAGSEAHNLRTRAELQGDQ-WVINGAKQFVSNGKR 163

Query: 237 SPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           + ++  F +     G+ G   FLVP         G    R ++K+G R++ T  +  +N 
Sbjct: 164 AQLAIVFAVTDPALGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNC 218

Query: 295 ---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                 LLG+    L+++   +E  +I I    A  ++   R +   A+ YAR R     
Sbjct: 219 RIPSANLLGERGKGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDK 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+   I AA  L+   A     A++   EA+ A++ A     W C  
Sbjct: 275 PIIEHQSIANLLADMHTRINAARLLTLHAARLRSAAQACLSEASQAKLFASEMAEWVCY- 333

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 +A++  GG GY+E+  + R YR++    I  GS
Sbjct: 334 ------KAIQIHGGYGYLEDYPVERFYRDARITQIYEGS 366


>gi|260578415|ref|ZP_05846329.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258603437|gb|EEW16700.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 402

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 52/303 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE + G+D AA+ +   K+    Y L+G K F+++       ++ A V+   G    
Sbjct: 132 MAITEPQFGSDSAAVAATA-KLDGDEYVLNGEKIFVTAGERCTHVVVWASVDKSAGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR     +P G    RL++K+G RS+ T      N     +   N+   P  D K
Sbjct: 191 KSFVVPR----DTP-GFELVRLEHKLGIRSSDTAHFILDNV---RIPKENLLGSPEVDTK 242

Query: 314 -----ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID-------QPVMKRAIA 360
                ++   D+    V+ M V +A A +   R      G+ ID       QP       
Sbjct: 243 KGFGGVMATFDNTRPMVAAMAVGVARASLEKLREILTDAGVEIDYDAPAWNQPAAASEYI 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  ++ R     D  +  S+EA+  +  A        +MA  +   A+E  G
Sbjct: 303 RLESDWEAAYLMTLRAGWMADNKQPNSKEASECKAKA-------GRMATDLTLRAVEIAG 355

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
             GY E   + +  R+S             +LD+     +GT   +QL     ++LG S 
Sbjct: 356 AYGYSERDLLEKWARDSK------------ILDIF----EGTQQIQQLV-VARRELGLSS 398

Query: 481 KKV 483
           K++
Sbjct: 399 KEL 401


>gi|254420960|ref|ZP_05034684.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187137|gb|EDX82113.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 254

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 19/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLV 258
           +TE   G+D+  I ++ +   D  Y L+G K F+++  ++D  I++A+    G+      
Sbjct: 1   MTEPGTGSDLQNIRTRARDAGDH-YVLNGSKIFITNGFLADLVIVVAKTGETGKGSADTS 59

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+E G+P G    +   K+G R+  T EL F +       LLG  +   G +  M+ L
Sbjct: 60  LMLVEAGTP-GFTKGKPLKKMGMRAQDTAELFFEDVRVPKENLLG--SEGAGFLMLMQQL 116

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L  AI + +    +   A  Y + R   G  +     M+  +AD+  ++       
Sbjct: 117 AWERLMIAIQAQASAEAAFDIARDYVKSRTAFGRPVAAFQTMRHRMADMQTELGVGRTF- 175

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  DE            + A   K W  +M   VI + ++  GG G++ E  ++R 
Sbjct: 176 ------VDECLKAEIAGTLTPMAAAAAKMWVSEMCSRVIDQCVQMHGGYGFMWEYPVSRA 229

Query: 434 YRESPANSILLGSGNAM 450
           + ++ A+ I  G+ + M
Sbjct: 230 FVDNRAHQIYGGTNDIM 246


>gi|169632378|ref|YP_001706114.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151170|emb|CAO99842.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 32/287 (11%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+ + E                 + +TE   G+D+ A+ +    + DG  Y ++G
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTA--VLDGDEYVING 164

Query: 231 HKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  + D  I++ +      G   +  ++ + +  G    +  NKIG +   T E
Sbjct: 165 SKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEANRAGFTKGKPLNKIGMKGQDTCE 224

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F N       LLG   +  G +  MK L +  +  AI+  +G   + A  + Y + R 
Sbjct: 225 LFFDNVRVPKENLLGMEGM--GFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRK 282

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      +  +A++  +I        R        K   E AA A       KY 
Sbjct: 283 AFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLNEKLSVEAAAAA-------KYK 335

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M
Sbjct: 336 ISDMFSKVVDECLQLHGGYGYMIEYPIARAYIDHRANRIYAGTNEIM 382


>gi|21225080|ref|NP_630859.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|4539191|emb|CAB39720.1| probable acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 34/270 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
           +   + +TE   G+D+  I +      D  Y L+G K F+S+  ++D  +++A+     G
Sbjct: 122 IVTAIAMTEPGAGSDLQGIRTTATDRGDH-YLLNGSKTFISNGILADLVVVVARTTPEGG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300
                 L+ +   +G    R   KIG ++  T EL F++               F +L+G
Sbjct: 181 SAGQSLLVVERGADGFERGRNLAKIGQQAQDTAELFFNDVHVPKENLLGEENRAFTYLMG 240

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             N++   +            I+ ++           Y + R   G  L     ++  IA
Sbjct: 241 --NLAQERLAIAVGAAAATEEILDIT---------TRYVKEREAFGRPLAKLQHVRFEIA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A +  AA   +F      D   +         + A + K+W  ++   V+   ++  G
Sbjct: 290 EMATE--AAVTRTF-----LDRCVTEHVAGRLDPVHASMAKWWATELQKRVVDRCLQLHG 342

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  +AR + +    +I  G+   M
Sbjct: 343 GYGYMSEYRVARAFLDGRIQTIYGGTTEIM 372


>gi|88856944|ref|ZP_01131595.1| Acyl-CoA dehydrogenase-like protein [marine actinobacterium
           PHSC20C1]
 gi|88813820|gb|EAR23691.1| Acyl-CoA dehydrogenase-like protein [marine actinobacterium
           PHSC20C1]
          Length = 409

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 103/276 (37%), Gaps = 44/276 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +      L LTE   G D   I +   K +DG + +SG K W   +   D FI++A 
Sbjct: 138 PLSRGEKTSALALTEPDAGADAGGIRTTATKTADG-WEISGSKLWISWADTVDFFIVIAL 196

Query: 249 VE------GRVGCFLVPRLLE------------DGSPNGLCYQRLKNKIGNRSNATVELE 290
            +      G +  FLV   +E            +  P GL + R++       ++ +  E
Sbjct: 197 TDPIKRNRGGMTAFLVDSPIEGLEISKPIATMGEQRPFGLFFDRVRV-----PDSAILGE 251

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGIL 349
               F  L   L V    +    +            GM   L + +  Y+  RH  G  L
Sbjct: 252 VGEAFAPLTNRLGVRRVEIGARCV------------GMAQRLVDMMCQYSLERHTFGAPL 299

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            ++  ++  IAD  +++ AA  +    A   D            R+ A   K    +M  
Sbjct: 300 AERQAVQFMIADSVMELHAARLMVRDAAGMLDSG------VKDIRMEASTVKVQSTEMLS 353

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            V+  AM+  G  GY +E  I   YR S    IL G
Sbjct: 354 RVVDRAMQVHGAMGYSKELPIEFVYRNSRVLRILEG 389


>gi|326389073|ref|ZP_08210655.1| glutaryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206673|gb|EGD57508.1| glutaryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 406

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G+D A + +  +K + G Y L+G K W  ++P++D F++ A+ E   G++  
Sbjct: 148 FGLTEPDAGSDPAGMKTIARKTAGG-YVLNGSKTWISNAPIADVFVVWAKSEAHGGKIRG 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP----VED 311
           F    +LE G   GL   ++  K+  R++ T E+        ++ D+ V        VE 
Sbjct: 207 F----VLEKGV-KGLSAPKIAGKLSLRASITGEI--------VMQDVEVGEDALLPHVEG 253

Query: 312 MK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +K     L+ A   +S   +  AE     A  Y   R   G  L    + +  +AD+   
Sbjct: 254 LKGPFGCLNRARYGISWGVLGAAEFCFHAARQYGLDRKQFGKPLAGTQLFQLKLADMMTQ 313

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I      S ++    D A++  E       M  + K      A  +   A +  GG+G  
Sbjct: 314 ITLGLQASLQVGRLLDRAEAAPE-------MISLVKRNNAGRALEIARMARDMHGGNGIQ 366

Query: 426 EERSIARH 433
           EE  + RH
Sbjct: 367 EEYQVIRH 374


>gi|254818634|ref|ZP_05223635.1| FadE12_1 [Mycobacterium intracellulare ATCC 13950]
          Length = 388

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 47/266 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
            V +  G+TE   G D + IT+  ++  D  Y ++G K ++S  M SD  ++L + +   
Sbjct: 119 EVHVCFGVTEPGAGLDTSRITTFAKRDGD-RYIVNGRKVWISKAMESDKILLLTRTQSYD 177

Query: 252 -------------------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEF 291
                              RV    + ++  +  S N L    L+  + +R       E 
Sbjct: 178 EVTKKTDGMTLFLTDLDRSRVDIRPIRKMGRNAVSSNELFIDNLEVPVEDRVG-----EE 232

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F ++L  LN         ++LI    A  ++   RV+L +A+ Y   R V G  +  
Sbjct: 233 GKGFQYILDGLNPE-------RMLI----AAEALGIGRVALEKAVKYGNEREVFGRPIGM 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD    + AA  +  +    +D  K    EA  A       KY C       
Sbjct: 282 NQGLQFPLADSLARLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADAGFTA 334

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
              A++  GG GY EE  I R++RE+
Sbjct: 335 ADRALQTHGGMGYAEEYHITRYFREA 360


>gi|240170436|ref|ZP_04749095.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium kansasii ATCC 12478]
          Length = 392

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 107/270 (39%), Gaps = 51/270 (18%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
            V +  G+TE   G D + IT+  ++  D  Y ++G K ++S  M SD  ++L + E   
Sbjct: 119 EVHVCFGVTEPGAGLDTSRITTFAKRDGD-RYFVNGRKVWISKAMESDKILLLTRTESLD 177

Query: 252 -----------------------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATV 287
                                  RV    + ++  +  S N L    L+  + NR     
Sbjct: 178 DVERRGAKKTDGMTLFLTDLDRSRVDVRPIRKMGRNAVSSNELFIDNLEVPVENRIG--- 234

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
             E    F ++L  LN         ++LI    A  ++   R +L +A+ YA  R V G 
Sbjct: 235 --EEGKGFQYILDGLNPE-------RMLI----AAEALGIGRAALDKAVKYATDREVFGR 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     ++  +AD    + AA  +  +    +D  K    EA  A       KY C   
Sbjct: 282 PIGMNQGIQFPLADSLAHLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADA 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRES 437
                  A++  GG GY EE  +AR++RE+
Sbjct: 335 GFTAADRALQTHGGMGYAEEYHVARYFREA 364


>gi|115436914|ref|XP_001217677.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188492|gb|EAU30192.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 439

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 53/311 (17%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-Y 226
           P + K  +P++  R Y P      ++  +AI    TE   G+D+A I++   K  DG  Y
Sbjct: 132 PPIIKFGSPQLQER-YLPDLLTGKKRACIAI----TEPGAGSDVANISTTAVKSPDGKHY 186

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            ++G K W  +   SD   M  +  G     +   LVP     G P G+  +RL    G 
Sbjct: 187 IINGEKKWITNGIWSDYATMAVRTGGPGAAGLSVLLVPL---KGYP-GVNMRRL-TVAGQ 241

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSG 327
           ++  T  +E        L D+ V   PVE+        M++++       L  A+     
Sbjct: 242 KTGGTTYIE--------LDDVKV---PVENLIGREGEGMRLIMTNFNHERLTIAVGVTRQ 290

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            RV+L+ A  Y  +R   G  L+DQPV++  +A    ++    A   +L   +       
Sbjct: 291 ARVALSSAFAYCLKREAFGKSLMDQPVVRHRLAKAGAELETMWAFMEQLL--YQMCHLSK 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMEC----IGGSGYIEERS---IARHYRESPAN 440
           EEA   R +  +T       A  V+ E  +C     GG+G+ +      +   YRE P  
Sbjct: 349 EEA--DRQLGGVTAM-AKAKAAMVLNECAQCAVLLFGGAGFTQSGQGELVEAIYREVPGA 405

Query: 441 SILLGSGNAMV 451
            I  GS + ++
Sbjct: 406 RIPGGSEDVLL 416


>gi|296331728|ref|ZP_06874195.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675882|ref|YP_003867554.1| FAD dependent acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151053|gb|EFG91935.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414126|gb|ADM39245.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 594

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 73/348 (20%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYMLTGEKQWITNSAFADVFVVYAKVDGEKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL------------L 299
               E   P G+     + K+G + ++T        E+   N  G +            +
Sbjct: 210 ----EKDFP-GVSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHLIAFNILNI 264

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G   ++ G +   K +I L +A                YA +R      +    + +  I
Sbjct: 265 GRYKLAVGTIGASKRVIELSAA----------------YANQRRQFKTPIASFSLTQEKI 308

Query: 360 ADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAP----------ITKYWCCKM 407
           A +A  + A  +  +R    F++  S+  +E+    R +A           + K +  + 
Sbjct: 309 ATMASRLYAMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIECSLNKVFGSET 368

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------L 455
              ++ E ++  GG G+++E  + R YR+S  N I  G+     L V            L
Sbjct: 369 LDYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKKALKGEL 428

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            L EK  +L E+L   + ++ GS       +L     + K+ K +A F
Sbjct: 429 PLFEKAQSLQEELMMLMPEEPGSR------VLEQEKYIVKQAKKIALF 470


>gi|307180055|gb|EFN68131.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 638

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 48/312 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ + EY                  LTE   G+D ++I S+  K 
Sbjct: 174 ILLYGTPEQKAKYLPRVSNGEY--------------AAFCLTEPGAGSDASSIRSRAIKS 219

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNG 269
           +DG  Y L+G K W  +  ++    + AQV          + ++  F+V R        G
Sbjct: 220 ADGSHYVLNGSKIWISNGGIASIMTVFAQVPFKDPKTGETKEKITAFVVEREF-----GG 274

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG- 327
           +     + K+G + + T E+ F +     +   NV     E  K+ +  L++    +S  
Sbjct: 275 VTSGPPEKKMGIKCSNTAEVFFEDV---KIPAENVLGKEGEGFKVAMNILNNGRFGMSAC 331

Query: 328 ----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-E 382
               MR  + +A+ +A +R   G  L +   ++  +A + +      +L++ L+ + D  
Sbjct: 332 LSGTMRYCINKAVSHATQRKQFGRTLNNYGTIQEKLARMVMLHYITESLAYALSGNMDLG 391

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    EAA ++  A  + +  C        E+++ +GG G++ E  + R  R+     I
Sbjct: 392 SQDYHLEAAISKCFASESAWLVCD-------ESIQILGGMGFMSETGLERVMRDLRIFRI 444

Query: 443 LLGSGNAMVLDV 454
             G+ + + L V
Sbjct: 445 FEGTNDILRLFV 456


>gi|301763076|ref|XP_002916956.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 421

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 45/267 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I ++ ++  D  Y ++G K W  +   ++ + +LA+ +      L P+
Sbjct: 160 VTEPVAGSDVAGIKTKAERKGDE-YIINGQKMWITNGGKANWYFLLARSD------LDPK 212

Query: 261 ----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVS 305
                     ++E  +P G+   R +  +G R         S+T G +  D+     NV 
Sbjct: 213 APANRAFTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVRVPKENVL 263

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
            G     KI +   D     V+   V LA     EA  YA  R   G +L++   +   +
Sbjct: 264 IGEGAGFKIAMQAFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQGISFLL 323

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ +  A     R A   D  +  +         A I K +   +A  +  +A++  
Sbjct: 324 AEMAMKVEIARLSYQRAAWEVDSGRRNT-------YYASIAKAFAADIANQLATDAVQIF 376

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+G+  E  + +  R++    I  G+
Sbjct: 377 GGNGFNTEYPVEKLMRDAKIYQIYEGT 403


>gi|297162062|gb|ADI11774.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 388

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 34/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC--- 255
           + +TE   G+D+  I +   +  D ++ L G K F++S + SD  I+LA+ +   G    
Sbjct: 126 IAMTEPGAGSDLQGIRTTAVRDGD-VWVLDGAKTFITSGIQSDLVIVLARSDPAAGARGM 184

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------V 304
             F+V R    G P G    R  +KIG  +  T EL F +       LLG         +
Sbjct: 185 SLFVVER----GMP-GFTRGRKLDKIGLHAQDTAELFFDSVRIPAANLLGTEGRGFMHLM 239

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P E M I +       +V      L + + Y   R   G  + D    +  +A++  
Sbjct: 240 ERLPRERMAIAVTAQCVTETV------LEQTLDYCTERTAFGRPVADFQHSRFLLAELTT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
                     R   + ++    + +AA A       K+W  ++    +   ++  GG GY
Sbjct: 294 QADITRVYLDRAIEALNDGTLTAVDAAKA-------KWWATELQTKTVDRCLQLHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           ++E  +AR + +S   ++  G+   M
Sbjct: 347 MKEYPVARAFLDSRIQTVYGGTTEIM 372


>gi|257387180|ref|YP_003176953.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257169487|gb|ACV47246.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 408

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 46/319 (14%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200
           LM +LEAG     S+ S    AL+  P +H+      F  E       P      A+G  
Sbjct: 77  LMQELEAGDSGVRSMASVQG-ALVMYP-IHE------FGSEAQRERWLPDLAAGDAVGCF 128

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML-------AQVEGR 252
           GLTE   G+D A++ +      DG Y LSG K W  ++P++D  ++        A+ +  
Sbjct: 129 GLTEPEHGSDPASMETTAVPDGDG-YRLSGTKTWITNAPIADVAVIWCKIDDGDAETDDP 187

Query: 253 VGCFLV---------------PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
           V   LV               PR  +     G+    +  K+  R+++T E+   + +  
Sbjct: 188 VRGVLVDLDSEGVSEEQGETEPRQTD--RSGGVETSEIDGKLSMRASSTGEIHLRDAWVP 245

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              LL  +    GP+  +    Y   A  +V   R     A  YA  R   GG +    +
Sbjct: 246 EDALLPGVEGMKGPLSCLTEARY-GIAWGAVGAARDCFEAAREYATDREQFGGPIARFQL 304

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A++A  I  A  L+ RLA        R ++ + A       K    +MA  V   
Sbjct: 305 QQEKLAEMATRITTAQLLADRLATLKARGDLRPQQVSMA-------KRNNVRMAREVAQT 357

Query: 415 AMECIGGSGYIEERSIARH 433
           A E +GG+G   +    RH
Sbjct: 358 AREMLGGNGITTDYPPMRH 376


>gi|172040335|ref|YP_001800049.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851639|emb|CAQ04615.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 389

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 115/251 (45%), Gaps = 11/251 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE+  G+D AA+ ++  +  D  + ++G K F+++   S  + ++A  +   G   +  
Sbjct: 130 LTEREAGSDAAAMKTRAVREGD-EWVINGSKCFITNGGRSSWYTVMAVTDPEAGARGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            +      G     L++K+G + + T EL F +       ++G+    TG    ++ L +
Sbjct: 189 FMVHKDDPGFRVGGLEHKLGIKGSPTAELYFEDCRVPASRMIGE--EGTGFKTALQTLDH 246

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I   ++   + +  +A+ Y + R   G  + D    +  +AD+ + I AA  + + 
Sbjct: 247 TRPTIGAQALGIAQGAFDQAVAYVKERKQFGKAIADFQNTQFMLADMKMKIDAARLMIYT 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A++ +  +  +E      +MA  +K +   +A  V  +A++ +GG G+  +  + R  R
Sbjct: 307 AASNAE--RGVAEGGERLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPVERMMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|163743915|ref|ZP_02151286.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161382856|gb|EDQ07254.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 18/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+  +T+  ++  D  + L+G K F+S      F ++    G       P
Sbjct: 123 LAMTEPGAGSDLRGMTATARQDGDD-FILNGTKHFISHADIADFAIVFMATGEEDTPRGP 181

Query: 260 R------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
           +       ++ G+P G   +     + +R      LEF         +LG+++       
Sbjct: 182 KKKITAFFVDKGTP-GFTIRDGYRNVSHRGYTNAVLEFDACRLPKSAVLGEVDKGFDVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +     +L  AI YA  R   G  +     +   +AD+A ++ AA 
Sbjct: 241 TWLGATRLQVAATCLGRAERALDHAISYAAERRQFGQQIGKFQGVSFKLADMATELKAAN 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A  FD+      + + A++ A        +M   V  EA++  GG G ++E  +
Sbjct: 301 LLTWEAAWKFDQGSVTEADMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPL 353

Query: 431 ARHYRESPANSILLGS 446
            R +R++    I  G+
Sbjct: 354 ERIWRDARVERIWEGT 369


>gi|146338528|ref|YP_001203576.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191334|emb|CAL75339.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E + G+D+ ++ ++  +  D  + L+G+K W  + P+++  ++ A+ + + G   +
Sbjct: 131 LAMSEPQAGSDVVSMKTRADRRGD-RFVLNGNKMWITNGPVAETLVVYAKTDPQGGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFIIEKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEENVLGQVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  +   + Y   R   G  +    +++  +AD+   + AA A
Sbjct: 250 ERAVL----AAGPLGIMQACMDVVLPYVHERKQFGQPIGTFQLVQGKVADMYTTMNAARA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI + +  
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILFAAEKATQCA-------LDAIQLLGGNGYINDYATG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|121594058|ref|YP_985954.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120606138|gb|ABM41878.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 642

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 125/321 (38%), Gaps = 68/321 (21%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSSPMSD-----AFIML 246
           L+E + G+ ++ IT++ +  +DG           Y L G+K ++SS   +       ++L
Sbjct: 184 LSEPQAGSSLSDITTRAE--ADGADFEVDPLGPRYRLRGNKMWISSGDHELTENIVHLVL 241

Query: 247 AQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
           A++ G  G           F+VP+ L D      G  N +    L +K+G R      L 
Sbjct: 242 AKIPGPDGKLVPGVKGISLFIVPKKLVDTDGQLTGERNDVALAGLNHKLGWRGTTNTLLN 301

Query: 291 F----------SNTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           F          +   G+L+G     L      + + +I I + +  + ++G   SL  A 
Sbjct: 302 FGEGRYPVRGGAGAIGYLVGRPGEGLRCMFHMMNEARIAIGMAATTLGLAGYYASLDYAR 361

Query: 337 HYARRRHVSGGI----------------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              + R V G                  LI    +KR +         A AL+   A   
Sbjct: 362 TRLQGRPVQGSTSAAGSAGKDASQPPVPLIRHADIKRMLLAQKSYCEGALALNLYCARLV 421

Query: 381 DEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           DE ++   +AA        ++ PI K W  +      + A++  GG GY  +  + +++R
Sbjct: 422 DEGRTGEPQAAQDAKLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWR 481

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           ++  N I  G+      D+L 
Sbjct: 482 DNRLNMIHEGTHGIQAADLLG 502


>gi|297571910|ref|YP_003697684.1| acyl-CoA dehydrogenase domain protein [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296932257|gb|ADH93065.1| acyl-CoA dehydrogenase domain protein [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 377

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 20/237 (8%)

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG   L+GHK F +S M   + M+          +    + D S  G+  + L  K+G R
Sbjct: 143 DGKVYLNGHKTFQTSSMKVPY-MIVMARNSEDMSVYTEWVVDMSKAGVTREPLA-KLGLR 200

Query: 283 SNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            ++        VELE S+ FG    + N     V+D     +L  A+ +      +  +A
Sbjct: 201 MDSLAELYFDNVELEESDIFG---TEGNAFMRGVKDFDQERFL-VALTNYGTALCAFEDA 256

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  L    +++   AD+ + I     + + +A      + R E     R 
Sbjct: 257 AKYANQRIQGGKPLAAHQLIQLKFADMKVAITNMRNMLYEIAWK----QGRGE---LGRG 309

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              + KY+C + +  VI ++++ + G     E  + R YR+   + I  G+   M+L
Sbjct: 310 DCSMAKYYCSQASTMVIDQSLQVLSGVAITGEHRLQRFYRDIRVDRISGGTDEMMIL 366


>gi|188587833|ref|YP_001920705.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|188498114|gb|ACD51250.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 379

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 22/262 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   GTD A++      +    Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 123 FGLTEPVAGTD-ASMQKTTAVLEGDHYVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              + +    G      + K+G R+++T EL F N       LLG+     G       +
Sbjct: 182 SAFIVEKDFPGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIA-----M 236

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   + +AE      + Y + R   G  +      +  +A +     AA 
Sbjct: 237 STLDGGRIGIAAQALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAK 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A + D+ +  +  AA A+++A        + A  V    ++  GG GY  +  I
Sbjct: 297 LLVYQAACAKDDHEKYTHLAAMAKLVAS-------RNATNVTNRCLQLFGGYGYSSDYPI 349

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R  R++    I  G+    ++
Sbjct: 350 ERMMRDAKITEIYEGTSEVQMM 371


>gi|260549545|ref|ZP_05823763.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Acinetobacter sp.
           RUH2624]
 gi|260407338|gb|EEX00813.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Acinetobacter sp.
           RUH2624]
          Length = 548

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 55/305 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV---EGR- 252
           L+E + G+ +  I ++    +DG Y L G+K ++S    D       ++LA++   +G+ 
Sbjct: 106 LSEPQAGSSLGDIRTRAVPTADGRYRLFGNKMWISGGEHDISGNIVHLVLAKIPDEQGKL 165

Query: 253 ------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS--------- 292
                 +  F VPR L D     G  N +    + +K+G R      L F          
Sbjct: 166 PAGVQGISLFTVPRKLVDEQGNIGERNDVALAGINHKMGYRGTVNCVLNFGEGRYTPEGE 225

Query: 293 -NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----- 342
               G L+G+    L+     + + +I + L +A +  +G       A+ YA+ R     
Sbjct: 226 PGAIGELVGEAGKGLSYMFHMMNEARISVGLGAAALGYTG----YLHALDYAKNRLQGRS 281

Query: 343 -----HVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYAR 394
                  S  I +I    ++R +       + A AL    A   D+  S   SE+   A+
Sbjct: 282 RSERDPSSPQIPIIQHADVRRMLLAQKSYASGALALCLYAAKLTDDIHSLEDSEQQKKAQ 341

Query: 395 IM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           ++     P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+    
Sbjct: 342 LLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQ 401

Query: 451 VLDVL 455
            +D+L
Sbjct: 402 AMDLL 406


>gi|183222678|ref|YP_001840674.1| putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912710|ref|YP_001964265.1| carnitine metabolism acyl-CoA dehydrogenase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167777386|gb|ABZ95687.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167781100|gb|ABZ99398.1| Putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 391

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 41/275 (14%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
           P+ K  +  G  +TE     G+D  ++ +  +K  D  + L+G KW+ +      + I++
Sbjct: 119 PLIKGELRTGFAMTEPSPGAGSDPTSLQTNAEKQGDK-FILNGRKWYCTGANGAKYLIVM 177

Query: 247 AQVEG---RVGCFLVP------------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           A+V G   +   FLVP             L+    P G C    +N         VE+  
Sbjct: 178 AKVNGSFRKTTMFLVPTDAKGYTMVREIELMGSHGPGGHCELNFEN---------VEVPE 228

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILI 350
               G +     +S   +   ++     +  M  +GM R +L+ A  YA+ R V    + 
Sbjct: 229 DMVLGRVGEGFRLSQERLGPARL-----THCMRWTGMARRALSIARSYAKEREVFNARIA 283

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++   A+ A +I  A  L+ + A      K   +E + A+    +++  C      
Sbjct: 284 DHQGIQWMFAERATEIEMAFLLTLKAAWLLKTGKDARQETSMAKW--KVSESLC-----N 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            I  A++  GG GY  +  +   YR++ A  I  G
Sbjct: 337 TIDMAIQICGGKGYSRDLPLELFYRDARAARIADG 371


>gi|198244805|ref|YP_002215769.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197939321|gb|ACH76654.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326623516|gb|EGE29861.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 24/265 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVG 254
           A  L LTE   G+D  + T+   + +  +Y L+G K F++      ++++     E +  
Sbjct: 119 AYALALTEPGAGSDNNSATTTWTRKNGKVY-LNGQKTFITGAKEYPYMLVLARDTEPKDP 177

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNVST 306
                    D +  G+    L +KIG    +T       VE++ S+  G   +G LNV  
Sbjct: 178 KKAFTLWWVDSNKPGIKINPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMY 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +A +A+ I
Sbjct: 237 NF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                +  ++A   D  +S        R  A + K +C + A  VI +A++ +GG GY +
Sbjct: 292 ENMRNMVLKIAWQADREES-------LRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTD 344

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R +R+     I  G+   M+
Sbjct: 345 EARVSRFWRDVRCERIGGGTDEIMI 369


>gi|126641156|ref|YP_001084140.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 311

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y
Sbjct: 34  TEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHY 79

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+ + +D  +++A+ + +     +  LL D + +G+       KIG  +  
Sbjct: 80  RINGSKTFISNGLHADLIVLVAKTDSQAKAKGISILLVDAALDGVKKGPSLQKIGLHAQD 139

Query: 286 TVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           T EL F +               F +L+ +L     P E + I      ++M++  +  +
Sbjct: 140 TAELFFDDVCVLATQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGAILGA 188

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  +  Y   R   G  L      +  +A+  +   AA A   + A  + + +    + A
Sbjct: 189 IELSKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLSVTQVA 248

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +    IT   C      VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 249 ALKCF--ITDVQC-----EVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 300


>gi|158521615|ref|YP_001529485.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510441|gb|ABW67408.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 29/251 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GR 252
           + LTE  GGTDI        +  +  + L+G K F++   ++D FI + + +        
Sbjct: 125 MALTEPGGGTDILGAVQTCAEEKEDRWVLNGEKVFITGAHVADYFITICRTDPDNKPSKS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGP 308
           +  FLVP      +  G+   R+  KI      +V + F+N     +   N+      G 
Sbjct: 185 LSTFLVP-----ANAKGISITRIP-KISCHHCDSVGISFNNV---EIPKENILGTRGNGW 235

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            E + +L    +  A+M V  +  +   A  YAR+R   GG +     ++  +AD+ +++
Sbjct: 236 FEMLTVLNPERIGVAMMGVGLIAAAYEYAFDYARKRQAFGGPISRFQSLQHYLADMYINL 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  ++++ A   D  +    EA  A+++A          A     +  E +GG G   
Sbjct: 296 ENSRNITYKSAWLCDNGQPYHMEATMAKVIA-------ADGALHATIKGAEILGGYGICN 348

Query: 427 ERSIARHYRES 437
           E  + R  R++
Sbjct: 349 EYPMQRFLRDA 359


>gi|299533372|ref|ZP_07046754.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718578|gb|EFI59553.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 22/256 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR-V 253
             LTE RGG+  A + ++  +  D  Y ++G K F+S+     F+++     A+   R V
Sbjct: 125 FALTEPRGGSHPADMRTRAVRDGDD-YLITGVKHFISNAAEARFMVVFAKTDAEAAARGV 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM 312
             F+VPR L      G+     +  +G R     E+   +        L    +G    M
Sbjct: 184 SAFIVPRDLP-----GIQISSPEKLMGIRGGHAFEVSLDSVRVPAANRLGAEGSGFKTAM 238

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+L    LD A  S+     +L  A  +A +R V G  + ++  ++  +AD+ L + AA 
Sbjct: 239 KVLDNSRLDVAATSLGIAEAALKAAADWANQRLVGGEPIANKQGIQFKLADMKLRLEAAW 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+ +      + +  ++++A A++ A        +M   V  EA++  GG GY  E  +
Sbjct: 299 ALTMQALALRQQGQPFTQQSAMAKLFA-------SEMVGFVTDEALQIHGGYGYTREMPL 351

Query: 431 ARHYRESPANSILLGS 446
            R+ R++    I  GS
Sbjct: 352 ERYVRDARILRIYEGS 367


>gi|240168609|ref|ZP_04747268.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 402

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 31/278 (11%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           TN+   +   V   + +TE   G+D AA+++      D  Y ++G K F+++      I+
Sbjct: 118 TNEQLERLGKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIV 176

Query: 246 ----LAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
               L + +GR  +  F+VPR        G+  +RL++K+G +++ T  + F N      
Sbjct: 177 VWATLDKSKGRAAIKSFIVPR-----EHPGVTVERLEHKLGIKASDTAVIRFDNARIPKD 231

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QP 353
            LLG+  +  G      ++   D+    V+ M + +  A +   R+   + G+ ID  +P
Sbjct: 232 NLLGNPEIQEGKGFS-GVMETFDNTRPIVAAMAIGVGRAALEEIRKILTNAGVEIDYDRP 290

Query: 354 --VMKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
             V   A A+   +  +  A+  L+ R A   D     S+EA+       ++K    +MA
Sbjct: 291 AYVQSAAAAEFLRMEAEWEASYLLALRAAWQADNNIPNSKEAS-------MSKAKAGRMA 343

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V  +++E  G +GY E+  + +  R+S    I  G+
Sbjct: 344 SDVTLKSVELAGTTGYSEQTLLEKWARDSKILDIFEGT 381


>gi|221069608|ref|ZP_03545713.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714631|gb|EED69999.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 22/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR-VGC 255
           LTE RGG+  A + ++  +  D  Y ++G K F+S+     F+++     A+   R V  
Sbjct: 127 LTEPRGGSHPADMRTRAVRDGDD-YLITGVKHFISNAAEARFMVVFAKTDAEAAARGVSA 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI 314
           F+VPR L      G+     +  +G R     E+            L    TG    MK+
Sbjct: 186 FIVPRDLP-----GIQISSPEKLMGIRGGHAFEVSLDGVRVPAANRLGAEGTGFKTAMKV 240

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    LD A  S+     +L  A  +A +R V G  +  +  ++  +AD+ L + AA  L
Sbjct: 241 LDNSRLDVAATSLGIAEAALKAAAGWANQRMVGGEPIASKQGIQFKLADMKLRLEAAWGL 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + +      + +  ++++A A++ A        +M   V  EA++  GG GY  E  + R
Sbjct: 301 TMQALALRQQGQPFTQQSAMAKLFA-------SEMVSFVTDEALQIHGGYGYTREMPLER 353

Query: 433 HYRESPANSILLGS 446
           + R++    I  GS
Sbjct: 354 YVRDARILRIYEGS 367


>gi|316935221|ref|YP_004110203.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602935|gb|ADU45470.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 67/292 (22%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W PKI S E        +Q        G+TE   GTD  ++ +  +K + G Y ++G K 
Sbjct: 110 WLPKIASGELR------LQ------AFGVTEPTSGTDTTSLKTFAKKDAGGDYVVNGQKI 157

Query: 233 WFLSSPMSDAFIMLA----------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W   +  SD  I+LA          + EG +  FLV   + +   +GL  + ++  +   
Sbjct: 158 WTSRAEYSDLMILLARTTPKDQVTKKTEG-LSVFLVD--MREARGHGLEIRPIRTMM--- 211

Query: 283 SNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           ++AT E+ F++               F ++L  +N         +ILI    A   V   
Sbjct: 212 NHATTEVFFTDMKVPKENLIGEEGKGFRYILSGMNAE-------RILI----ASECVGDA 260

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  +A+A  YA+ R V G  +     ++  IA    ++ AA  +       ++       
Sbjct: 261 KWFIAKASAYAKDRTVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEATRKYEAGMDCGA 320

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           EA  A+++A          A A    A  CI   GG G+ EE  + R +RE+
Sbjct: 321 EANMAKMLA----------ADASFEAANACIQTHGGFGFAEEYDVERKFRET 362


>gi|324999434|ref|ZP_08120546.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 403

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 100/273 (36%), Gaps = 43/273 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--------G 251
            G++E   G+D  A+ +  ++   G       +W  +SP +D   + A  +        G
Sbjct: 142 FGMSEPDAGSDAMAMRTVARRDEGGWRITGTKQWITNSPEADWVFVWAVTDPVRHRDRAG 201

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLL 299
            + CFLVP      S  G     +    G+       + F +              GF L
Sbjct: 202 GISCFLVPT-----SAPGFAVDSVITLFGSAGGYEGIISFDDVLVPEDALVGELDHGFRL 256

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               VSTG          L +A   V   + +L +A  YA  R   G  + D   +   +
Sbjct: 257 ALEGVSTG---------RLYNAGRCVGLAQWALDKAAAYATERRAFGRTIGDYQGVSFPL 307

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD A++I AA A++   A           E A       +TK +  +M   V    M+  
Sbjct: 308 ADCAVEIYAADAMARETAGRVQAGLEAHHEVA-------MTKVFTTEMCSRVYERCMQVH 360

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GG G   E  +   + +  A  + +  G+A VL
Sbjct: 361 GGMGLTTEMRLYDGWHQ--ARLVRIADGSAEVL 391


>gi|297183564|gb|ADI19692.1| acyl-CoA dehydrogenases [uncultured Rhizobiales bacterium
           HF4000_48A13]
          Length = 385

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S+VA    P V  +  PKI S E               + LGLTE RGG+D A + ++ 
Sbjct: 94  GSIVAAHARPEVADEIVPKICSGE-------------AIVALGLTEPRGGSDAAHLQTKA 140

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVP 259
           +   DG Y LSG K  +S +  +D  ++LA+ +      G V  FLVP
Sbjct: 141 RADGDG-YVLSGEKTSISMAEQADYILVLARTDESNPGAGGVSAFLVP 187


>gi|84498482|ref|ZP_00997252.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84381225|gb|EAP97109.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 386

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 36/282 (12%)

Query: 186 TNKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WF 234
           T   P Q+T++  G+          L+E   G+D+ ++T++  +  D   Y + G K W 
Sbjct: 106 TFGTPEQQTALLPGMLSGDQLGAYALSEPLAGSDVGSMTTRATRDGDNAAYAIKGRKAWI 165

Query: 235 LSSPMSDAFIMLAQVE---GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  +D +   A+     GR + CF+VP        + + +   + K+G   +   E+ 
Sbjct: 166 SHAGHADYYTTFARTSDDGGRGLSCFIVP-----AGSDAMTFGAPEKKMGLHCDTVREVI 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHV 344
           +    G  + + N      + M I L  LD+  + ++     LA++   A     + R  
Sbjct: 221 YD---GVPVEEANRIGDEGQGMAIALSALDAGRLGIASGATGLAQSALDAAAAYAKERQQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   IAD+   ++ A A     A   D  +  S+EAA A+++A       
Sbjct: 278 FGRAIAANQGLAFMIADMEAAVSGARAAYLYAARLKDAGRPFSKEAAVAKLLA------- 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A  V  +A++ +GG+GY ++  + R +RE+    I  G+
Sbjct: 331 TDAAMKVTTDAVQVLGGAGYTQDFPVERMFREAKVTQIFEGT 372


>gi|118463616|ref|YP_880260.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118164903|gb|ABK65800.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 642

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 52/334 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    + DG  Y L+G K W  +  +++  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARLASTATPVDDGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPSENLVGREGDGLK 281

Query: 314 I-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L++  +S+        + +L  A  ++  R   G  L +   + R ++ IA  + 
Sbjct: 282 IALTTLNAGRLSIPASATGSAKWALKIAREWSGERVQWGKPLAEHEAVARKLSFIAATVY 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+    A   DE ++        RI A + K W  +MA  +  E M+  GG GY   
Sbjct: 342 ALDAVLELSAQMADEGRND------IRIEAALAKLWSSEMACVIADEVMQIRGGRGYETA 395

Query: 428 RSI-ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS--TLEQDLGSSGKKVI 484
            S+ AR  R  P   +L        L +  + E  + +   L +   ++  L ++G    
Sbjct: 396 ESLAARGERAVPVEQVLRD------LRINRIFEGASEIMRLLIAREAVDAHLAAAG---- 445

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
                   L K D G    L EK A A  A+  Y
Sbjct: 446 -------DLAKPDAG----LREKAAAAVGASGFY 468


>gi|114675645|ref|XP_001170163.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 1 [Pan
           troglodytes]
          Length = 405

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 144 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 200

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 201 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 256

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 257 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 315

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 316 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 368

Query: 432 RH 433
           RH
Sbjct: 369 RH 370


>gi|324999871|ref|ZP_08120983.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 386

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 45/321 (14%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDI 211
           S S+T  + V L   P +        F  E       P      A+G  GLTE  GG+D 
Sbjct: 86  SVSITVEAGVGLGAMPILR-------FGTEEQKARWLPDLAAGRALGAFGLTEPGGGSDA 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-------QVEG--RVGCFLVPRLL 262
            A T    ++ DG + ++G K F+++  +D   ++        + +G   +   LVP   
Sbjct: 139 GA-TRTTARLEDGEWVINGSKCFITNSGTDITSVVTVTAVTGEKPDGGKEISAILVPA-- 195

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
             G+P G       +K+G   + T EL F +       LLG+           + L  LD
Sbjct: 196 --GTP-GFTVGGKYSKVGWNCSDTRELFFDDVRVPEANLLGERGRGY-----AQFLSILD 247

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++ + V LA     E++ YA  R   G  +     ++  IA++   +  A     
Sbjct: 248 EGRVAIAALSVGLAQGCVDESVRYAGEREAFGRTIGGYQAIQFKIAEMEARVHTARLAWQ 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A    + +   +EAA A+++A          A     +A +  GG G++ E  + R Y
Sbjct: 308 HAARLLVDGEPFKKEAAIAKLVA-------SNAAMDNARDATQVFGGYGFMNEYPVGRFY 360

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R+  A  + +G G + V  +L
Sbjct: 361 RD--AKILEIGEGTSEVQKLL 379


>gi|256783767|ref|ZP_05522198.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289767649|ref|ZP_06527027.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289697848|gb|EFD65277.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 34/270 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254
           +   + +TE   G+D+  I +      D  Y L+G K F+S+  ++D  +++A+     G
Sbjct: 122 IVTAIAMTEPGAGSDLQGIRTTATDRGDH-YLLNGSKTFISNGILADLVVVVARTTPEGG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300
                 L+ +   +G    R   KIG ++  T EL F++               F +L+G
Sbjct: 181 SAGQSLLVVERGADGFERGRNLAKIGQQAQDTAELFFNDVRVPKENLLGEENRAFTYLMG 240

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             N++   +            I+ ++           Y + R   G  L     ++  IA
Sbjct: 241 --NLAQERLAIAVGAAAATEEILDIT---------TRYVKEREAFGRPLAKLQHVRFEIA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A +  AA   +F      D   +         + A + K+W  ++   V+   ++  G
Sbjct: 290 EMATE--AAVTRTF-----LDRCVTEHVAGRLDPVHASMAKWWATELQKRVVDRCLQLHG 342

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  +AR + +    +I  G+   M
Sbjct: 343 GYGYMSEYRVARAFLDGRIQTIYGGTTEIM 372


>gi|17569725|ref|NP_510788.1| Acyl CoA DeHydrogenase family member (acdh-10) [Caenorhabditis
           elegans]
 gi|2833314|sp|Q22347|ACADM_CAEEL RecName: Full=Probable medium-chain specific acyl-CoA dehydrogenase
           10, mitochondrial; Short=MCAD; Flags: Precursor
 gi|1125771|gb|AAB52493.1| Hypothetical protein T08G2.3 [Caenorhabditis elegans]
          Length = 417

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 35/262 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+  + ++ +K  D  Y ++G K W      +  F +LA+ +       G+ 
Sbjct: 150 VTEPGAGSDVNGVKTKCEKKGDE-YIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKA 208

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +     +   NV   P    
Sbjct: 209 FTAFIV-----DGDTPGITRGKKEKNMGQRCSDTRVITFEDV---RVPAENVLGAPGAGF 260

Query: 313 KILIYLDSAIMSVSGMRVS--------LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           K+   +++  M+  G+           L E+  YA  R   G ++ +   ++  +AD+A+
Sbjct: 261 KVA--MEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAV 318

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++  A  ++++ AN  D     S  A+ A+  A  T       A      A++  GG+G+
Sbjct: 319 NLELARLITYKSANDVDNKVRSSYNASIAKCFAADT-------ANQAATNAVQIFGGNGF 371

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  + +  R++    I  G+
Sbjct: 372 NSEYPVEKLMRDAKIYQIYEGT 393


>gi|29833670|ref|NP_828304.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|15824131|dbj|BAB69296.1| acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|29610794|dbj|BAC74839.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 409

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +  EA+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEEALEYAKTREQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRASWMAVN 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 334 GKP------FTAAEGSMSKLFASETAKKVTAQAVQILGGNGFTREYPVERMHRDAAIYTI 387

Query: 443 LLGS 446
             G+
Sbjct: 388 FEGT 391


>gi|113868119|ref|YP_726608.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113526895|emb|CAJ93240.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 388

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 29/299 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +      +  S E   T   P       + LG++E   G+D+A++ +  +K  DG
Sbjct: 92  MATPAL-----ARFGSDELRETFLKPTVAGDFVVCLGVSEAGAGSDVASLKTTARK--DG 144

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN-GLCYQRLKN 277
             Y ++G K W  +   +D   +LA        R    +   L E G    G+   ++K 
Sbjct: 145 SDYVINGSKMWITNGLQADWMCLLANTSDGDIHRNKSLICLPLREGGKLRPGITMNKIK- 203

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSL 332
           K+G  S+ T ++ F +      + +GD  +  G    M+      L  A   V+ +  ++
Sbjct: 204 KVGMWSSDTAQVFFDDVRVPQRYRIGDEGM--GFTYQMRQFQEERLSGATRRVTALTNAI 261

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E I Y R+R   G  ++D   +   +A++  ++    ++ +R A         +E A+ 
Sbjct: 262 NETIEYTRQRKAFGRSILDNQAVHFRLAELKTEVELLRSVIYRAAQVHMSGGDMTELASM 321

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A++ A        ++   V    ++  GG G+  +  ++R +R+    SI  G+   M+
Sbjct: 322 AKLKAG-------RLCREVTDSCLQYWGGMGFTWDNRVSRAWRDLRLISIGGGADEIML 373


>gi|46199877|ref|YP_005544.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
 gi|46197504|gb|AAS81917.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 39/285 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   +  A+G  GLTE   G+D AA+ ++ +K+  G + L+G K F++   ++  ++++A
Sbjct: 114 PKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGG-WRLNGTKQFITQGSVAGVYVVMA 172

Query: 248 QVE---------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
           + +           +  F   R        GL   R + K+G  ++ T +L   + F   
Sbjct: 173 RTDPPPSPERKHQGISAFAFFR-----PERGLKVGRKEEKLGLTASDTAQLILEDLFVPE 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LLG+            +L  LD   + ++ M V L +A       +  G     +P+ 
Sbjct: 228 EALLGERGKGF-----YDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIA 282

Query: 356 KRAIADIALDIAAATALSFRL-----ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +       L  AA    + RL     A   D  +  + EAA A++ A       C     
Sbjct: 283 EFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVRACD---- 338

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              EA++ +GG GY+++  + R++R++    I  G G + +L ++
Sbjct: 339 ---EAIQILGGYGYVKDYPVERYWRDARLTRI--GEGTSEILKLV 378


>gi|330972567|gb|EGH72633.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 33/279 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---- 236
           D    A ++K +    +G   LTE   G++   + ++ +   D  + ++G K F+S    
Sbjct: 105 DEQKHAWLEKLATGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKR 163

Query: 237 SPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           + ++  F +     G+ G   FLVP         G    R ++K+G R++ T  +  +N 
Sbjct: 164 AQLAIVFAVTDPALGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCVVTLNNC 218

Query: 295 ---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                 LLG+    L+++   +E  +I I    A  ++   R +   A+ YAR R     
Sbjct: 219 RIPAANLLGERGKGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDK 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+   I AA  L+   A      ++   EA+ A++ A     W C  
Sbjct: 275 PIIEHQSIANLLADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAEWVC-- 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                ++A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 333 -----SKAIQIHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|326435102|gb|EGD80672.1| acyl-CoA dehydrogenase domain-containing protein [Salpingoeca sp.
           ATCC 50818]
          Length = 832

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 39/259 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCF 256
           LTE   G+D AA+ +  +K  D  Y L+G K F+S    +D ++++A+        + CF
Sbjct: 175 LTEPGSGSDAAALRTTAKKDGDD-YILNGSKAFISGGGDTDVYLIMARTGEPGPKGISCF 233

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG---DLNVST 306
           +V R       +GL +   + K+G  S  T       V +  S+  G   G     N++ 
Sbjct: 234 IVNR------DDGLTFGAKERKLGWNSQPTRMVIMEDVRVPASSVLGGEEGVGRGFNIAM 287

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +   +I I    A  SV G + SL + + Y   R   G  + D   ++  +AD A ++
Sbjct: 288 DGINGGRINI----ASCSVGGAQASLLQTVEYMNERKQFGSKISDFQALQFRLADYAAEL 343

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME--------- 417
           +A+  +    A   D   S +     A+I    +++    +  AVI   +E         
Sbjct: 344 SASRQVVRLAARELDAKSSFTTNPCPAQISTFRSQHERRLLRKAVIKRRVEYDIMLTTYS 403

Query: 418 -CIGGSGYIEERSIARHYR 435
            CI  S   ++R+  R ++
Sbjct: 404 VCISSS---DDRAFLRRFK 419


>gi|312195948|ref|YP_004016009.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227284|gb|ADP80139.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA--------QVEG 251
           L+E+  G+D A++ ++  +  DG  + L+G K W  ++ +S  + ++A        +V+G
Sbjct: 129 LSEREAGSDTASMRARASR--DGSDWVLNGTKCWITNAGISTWYTVMAVTEPDAARKVDG 186

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  F+V +        G      + K+G + + T E+ FS+    + GD  +   P   
Sbjct: 187 -VSAFVVHK-----DDPGFEVGSKERKLGIKGSPTREIHFSDCR--IPGD-RIIGAPGSG 237

Query: 312 MKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           ++  L  LD    ++    V +A+     +I Y + R   G  + D   ++  +AD+A+ 
Sbjct: 238 LRTALRTLDHTRPTIGAQAVGIAQGALEASIAYTKERKQFGRRIADNQAVQFMLADMAMK 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +  A     A++   E     + A   K +   +A +V  +A++  GG+GY 
Sbjct: 298 IEAARHLVYVAA-----ARAERGEPDLGFVTAA-AKCYASDVAMSVTTDAVQLFGGAGYT 351

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +  + R  R++    I  G+     + +   L KG
Sbjct: 352 RDFPVERMMRDAKITQIYEGTNQIQRVVMSRQLLKG 387


>gi|237729335|ref|ZP_04559816.1| crotonobetainyl-CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|283835101|ref|ZP_06354842.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|226909064|gb|EEH94982.1| crotonobetainyl-CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|291069398|gb|EFE07507.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|148703118|gb|EDL35065.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e [Mus
           musculus]
 gi|148703119|gb|EDL35066.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e [Mus
           musculus]
          Length = 626

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448
           GSGY+++    R  R+  A  +L+  GN
Sbjct: 407 GSGYMKDYPYERMLRD--ARILLIFEGN 432


>gi|118472697|ref|YP_886442.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173984|gb|ABK74880.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 442

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 17/224 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y LSG K  + +   ++ FI+ AQ  G+   F+V     + S  GL   +    +G R+ 
Sbjct: 228 YRLSGVKSLVPAAADAELFIVAAQFNGKPALFIV-----EASSKGLSV-KADRSMGLRAA 281

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E  N    L   LG+   +     +   L  L  A ++V      L   + Y + 
Sbjct: 282 ALGQIELDNVTVPLSARLGEDGATDQDYSEAIALARLGWAALAVGTSHAVLDYVVPYVKE 341

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           RH  G  +  +  +    A+IA+++     +++R A   ++    + EAA AR +     
Sbjct: 342 RHAFGEPIAHRQSVAFMCANIAIELDGLRLITWRGAARAEQGLPFAREAALARKLG---- 397

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +  + ++ +GG GY +E  + R YR+  A  I  G
Sbjct: 398 ---ADKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRAIGIAEG 438


>gi|16126567|ref|NP_421131.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221235349|ref|YP_002517786.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13423853|gb|AAK24299.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220964522|gb|ACL95878.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 47/260 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G D +++ ++ +K+  G Y L+G K W   +  ++  +++A+   +  C   
Sbjct: 125 FAVTEPNSGLDTSSLETRAEKVEGG-YRLNGRKIWTTGAQRANKILIIARTTPKDQCAKP 183

Query: 259 PRLLEDGSPNGLCYQRLKN-------KIGNRSNATVEL--------------EFSNTFGF 297
            + L       L Y   +N       K+G ++     L              E    F +
Sbjct: 184 HQGLS------LFYTDRENIEAKPIPKMGRKAVECNMLFIEDLFVPAQDLVGEEGKGFQY 237

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LL  LN         ++L     A+ ++   R +LA+A  YA  R V G  +     +  
Sbjct: 238 LLHGLNPE-------RVLF----AVEAIGLGRAALAKATTYANERIVFGRPIGQNQGVAH 286

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A    ++ AA  L+F+ A+ +D+ K    EA  A+ +     +  C+   +V+A    
Sbjct: 287 PLAKSWAELEAANLLAFKAASLYDQGKECGAEANAAKYLGAEAGFHACEA--SVLAH--- 341

Query: 418 CIGGSGYIEERSIARHYRES 437
             GG GY +E  + R++RE+
Sbjct: 342 --GGMGYAKEYDVERYFREA 359


>gi|86140672|ref|ZP_01059231.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85832614|gb|EAQ51063.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 42/264 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254
           L+E   G+D  A + +   I  G  Y L+G K W  +   +D ++++AQ +       + 
Sbjct: 125 LSEPEAGSD--ATSQKTTAIDQGDHYILNGTKNWITNGGSADYYLVIAQTDKEKKHRGIN 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302
            F+V +  E     G      + K+G R + T  L F++             FGF     
Sbjct: 183 AFIVEKGWE-----GFEIGPKEQKLGIRGSDTHSLIFNDVKVPKENRIGEDGFGFKFAMK 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +S G        I + +  + ++     LA    Y++ R   G  + +   +   +AD+
Sbjct: 238 TLSGGR-------IGIAAQALGIAAGAFELAR--DYSKVRKAFGTEICNHQAIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            ++I AA  +  + A   D+  +    +A A++ A        K+A  V  EA++  GG+
Sbjct: 289 QVEIEAARHMVMKAAWDKDQGNNYDISSAMAKLHA-------SKVAMDVTVEAVQVHGGN 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+++E  + R  R++    I  G+
Sbjct: 342 GFVKEYHVERLMRDAKITQIYEGT 365


>gi|331700725|ref|YP_004397684.1| butyryl-CoA dehydrogenase [Lactobacillus buchneri NRRL B-30929]
 gi|329128068|gb|AEB72621.1| Butyryl-CoA dehydrogenase [Lactobacillus buchneri NRRL B-30929]
          Length = 372

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 26/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVP 259
           +TE  GG++   I ++  K  D  + ++G K  +++  +++ + +LA+ E  ++  F+V 
Sbjct: 121 MTEPSGGSNPKGIATRAIKQGDN-WVITGDKIMITNGGLAEVYCVLAKTEDDQMAVFVV- 178

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
               D    G  + + ++ IG +     E+         S+  G +   L +      D 
Sbjct: 179 ----DKDMPGFKFGKREDFIGLKGVPVGEVVLNHVVVPDSHLLGRIGQGLEIGDNAHADA 234

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           ++L+    A+++   M   L  A++Y++ R      L    V +  IADIA+     TAL
Sbjct: 235 RVLM---GAVLA-GIMEHELQTAVNYSKERKAMDTPLYQLQVTQEKIADIAIAKENTTAL 290

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A++    K  +E AA A       K +  + A A   +A++ +GG GY  E  +  
Sbjct: 291 YQKGADNKVANKPYAEVAAMA-------KSYGSRSAVASGDKALQILGGYGYSHEYPVEH 343

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
             R++ A  +  G+   M L++ N
Sbjct: 344 LIRDARAMELAEGTIEKMNLEITN 367


>gi|312195499|ref|YP_004015560.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311226835|gb|ADP79690.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 52/302 (17%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P+  +  A+G  GLTE   G+D A  T    K+    + ++G K F+++
Sbjct: 102 FGTEEQRKEWLPLLASGKALGAFGLTEPGAGSD-AGGTRTTAKLDGDEWVINGSKAFITN 160

Query: 238 PMSD--AFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D    + +  V GR   G   +  ++      G   +   +K+G  ++ T  L F++
Sbjct: 161 SGTDITRVVTVTAVTGRSAAGKPEISTIIVPVPTPGFTAEPPYSKVGWHASDTHPLSFAD 220

Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345
                  LLG+             L  LD   +++S + V LA     E++ YA+ R   
Sbjct: 221 VRVPAANLLGEQGRGYA-----NFLRILDEGRIAISALSVGLAQACVDESVRYAKEREAF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMA---- 397
           G                 + I    A+ F++A    EA++     AY    AR++A    
Sbjct: 276 G-----------------VPIGRYQAIQFKIAEM--EARAHVARTAYYDAAARMLAGLPF 316

Query: 398 ----PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                I K +  + A     EA +  GG G++ E  +ARH+R+  A  + +G G + V  
Sbjct: 317 KKEAAIAKLFSSEAAVTNAREATQIFGGYGFMNEYPVARHWRD--AKILEIGEGTSEVQK 374

Query: 454 VL 455
           +L
Sbjct: 375 ML 376


>gi|167568673|ref|ZP_02361547.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 582

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 51/301 (16%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVG------- 254
           TE + G+D+ A+ +    + D +Y ++G K ++S+ M D     L  V GR+G       
Sbjct: 170 TEPQAGSDMTAVRTVATPLGDDVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTALDSF 229

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLK-----NKIGNRSNATVELEF---SNTFGFLLGDLN 303
              C +VPR   + +   L    ++      K+G    A   L F     T   LLG+  
Sbjct: 230 SLSCLIVPRFWRNDATGKLESNHVECVAVPRKMGLNGCANTHLVFGRSGTTRAHLLGNRK 289

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI---------- 348
                V  ++++  ++ A M      + +A     +++ YARRR     I          
Sbjct: 290 ----NVGLLQLVPLMNQARMGTGLFGIGVASSAYLQSVSYARRRVQGRPIDSASDTAAPR 345

Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYAR------I 395
             +++   ++R + D+   +     L  +L  +       EA   ++ A   R      +
Sbjct: 346 VRIVEHGDVQRMLVDMKARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLL 405

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +    A  +   A++  GG GY +   + ++ R+    SI  G+      D++
Sbjct: 406 LTPICKAFISDQAWRICETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLV 465

Query: 456 N 456
            
Sbjct: 466 R 466


>gi|33598844|ref|NP_886487.1| isovaleryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574974|emb|CAE39638.1| isovaleryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 392

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 13/254 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSEPGTGSDVVSMRLRADRKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
              L +    G    +  +K+G R + T EL F +       +LG +N   G V  +   
Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFEDCEVPEENVLGQVN---GGVRVLMSG 243

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S   +  M+  +   + Y   R   G  + +  +++  IAD+   + A+ A 
Sbjct: 244 LDYERAVLSGGPLGIMQGVMDVVVPYIHDRKQFGQAIGEFQLIQGKIADMYSVLQASRAF 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D+  +           A I   +  + A  +  E ++ +GG+GYI E  + R
Sbjct: 304 CYAVGRNLDQLGAGHVRQVRKDCAALIL--YTAEKATWMAGEGVQILGGNGYINEYPVGR 361

Query: 433 HYRESPANSILLGS 446
            +R++    I  G+
Sbjct: 362 MWRDAKLYEIGAGT 375


>gi|118468197|ref|YP_888446.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169484|gb|ABK70380.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 384

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGC 255
           L+E   GTDI A  +   +  DG   ++G K W   SP +   I+LA++     +     
Sbjct: 126 LSEPHSGTDIRAGRTVAVEHGDGTVSITGEKAWITQSPAAHFCIVLAKLGSTDRDAPTAA 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVS 305
           F+VP        +G+   + +   G R      + F N          T GF        
Sbjct: 186 FVVPL-----DTDGVTVGKDEPMSGFRGMPMANVHFDNCRIPSSWRLQTDGF-------- 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +E +  L  LD+    V  MR +L EA  Y R R   G  L D  +++  +  +  D
Sbjct: 233 RGMMEGLN-LARLDAGCYGVGFMRAALREATAYVRDRQAFGKTLADLQIVQEKLGRLHAD 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA  L      S+               +    K +    A     EA++ +GG G  
Sbjct: 292 YLAARGLLREGVASYAGGGGGDPH------LISAAKMFATDAAMRNTVEAVQLLGGYGVH 345

Query: 426 EERSIARHYRESPANSILLGS 446
               + R  R++    I+ G+
Sbjct: 346 LHYPVQRLMRDAKITQIIDGT 366


>gi|312966159|ref|ZP_07780385.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312289402|gb|EFR17296.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L    +A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FL----AALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|296536033|ref|ZP_06898172.1| butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296263639|gb|EFH10125.1| butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 392

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA---QVEGRVG- 254
             L+E   G+D+AA+ +   +  +G + +SG K W  +  ++  +++ A   +  G  G 
Sbjct: 125 FALSEPEAGSDVAALATTATRDGNGHWRISGTKTWISNGGIAGHYVVFARSGEAPGARGL 184

Query: 255 -CFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             F+VP           +E  +P+ L   R  +         V +  S+  G       V
Sbjct: 185 SAFVVPADAPGLSVEARIEVTAPHPLATLRFDD---------VRVPDSHRLGAPGDGFKV 235

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   ++  +  +       ++   R +L   +  A  RH+ GG L +Q   + AIAD A 
Sbjct: 236 AMATLDVFRATV----GAAALGFARRALDLTVERAENRHLFGGPLFEQQQSQVAIADSAT 291

Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++ AA  L +R A   D  + R S EA+ A       K +  + A      A++  GG G
Sbjct: 292 EVEAAALLVYRAAWLKDSGRPRISREASMA-------KLYATEAAQRAADRAVQIHGGLG 344

Query: 424 YIEERSIARHYRESPANSILLGS 446
                     YRE  A  +  G+
Sbjct: 345 VTRGHKAEELYREVRALRVYEGA 367


>gi|296138786|ref|YP_003646029.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026920|gb|ADG77690.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 386

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +K  D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 131 LSEREAGSDAASMRTRARKDGDD-WVLNGSKCWITNGGKSTWYTVMAVTDPEKGANGISS 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            +      G      ++K+G + + T EL F         ++G+             L  
Sbjct: 190 FIVHKDDPGFSVTGYEHKLGIKGSPTAELAFEECRIPAMRMIGEEGTGF-----KTALQT 244

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  +
Sbjct: 245 LDHTRPTIGAQAVGIAQGALDVAIDYIKERKQFGTSISDFQGIQFMVADMAMRLEAARLM 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A     A++   E     I +  +K +   +A  V  +A++ +GG+GY  +  + R
Sbjct: 305 VYTAA-----ARAERGEKNLGFI-SSASKCFASDVAMDVTTDAVQLLGGAGYTRDFPVER 358

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 359 MMRDAKITQIYEGT 372


>gi|116329092|ref|YP_798812.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330298|ref|YP_800016.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121836|gb|ABJ79879.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123987|gb|ABJ75258.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 43/277 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+      I   L+E   G+D+  +++   K  D        +W      + A+ + A  
Sbjct: 114 PVIDGEYGISFCLSEPGAGSDVPGMSTTAVKKGDKWVINGTKQWITGGGSAGAYTVFAYT 173

Query: 250 E-GR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------- 293
           + GR    V CF V R        GL   + ++K+G R++ T ++ F +           
Sbjct: 174 DKGRGTRGVSCFYVKR-----DTPGLTVGKKEDKLGIRASDTRQIIFEDCAVEEANMIGR 228

Query: 294 -TFGFL--LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
              GF+  L  LN S   V           A M V   + +L  A  YAR+R   G  + 
Sbjct: 229 ENLGFIYALQTLNASRPYV-----------AAMGVGVSQAALDYASKYARQREQFGSKIS 277

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAP 409
               ++  +AD+++ +  +  +++  A   D    R  + +A A+  A  T   C     
Sbjct: 278 SFQAVQHMLADMSIGLETSRQVTYLAARMADADDPRLPKYSAIAKAHASETAMKCA---- 333

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +A++  GG GY +E  + +  R++    I  G+
Sbjct: 334 ---LDAVQIFGGYGYTKEYPVEKLMRDAKILCIFEGT 367


>gi|55981907|ref|YP_145204.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|82407403|pdb|1WS9|A Chain A, Crystal Structure Of Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|82407404|pdb|1WS9|B Chain B, Crystal Structure Of Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|85544473|pdb|2CX9|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544474|pdb|2CX9|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544475|pdb|2CX9|C Chain C, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544476|pdb|2CX9|D Chain D, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|93279190|pdb|2D29|A Chain A, Structural Study On Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|93279191|pdb|2D29|B Chain B, Structural Study On Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|55773320|dbj|BAD71761.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 387

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 39/285 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           P   +  A+G  GLTE   G+D AA+ ++ +K+  G + L+G K F++   ++  ++++A
Sbjct: 114 PKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGG-WRLNGTKQFITQGSVAGVYVVMA 172

Query: 248 QVE---------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
           + +           +  F   R        GL   R + K+G  ++ T +L   + F   
Sbjct: 173 RTDPPPSPERKHQGISAFAFFR-----PERGLKVGRKEEKLGLTASDTAQLILEDLFVPE 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LLG+            +L  LD   + ++ M V L +A       +  G     +P+ 
Sbjct: 228 EALLGERGKGF-----YDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIA 282

Query: 356 KRAIADIALDIAAATALSFRL-----ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +       L  AA    + RL     A   D  +  + EAA A++ A       C     
Sbjct: 283 EFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACD---- 338

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              EA++ +GG GY+++  + R++R++    I  G G + +L ++
Sbjct: 339 ---EAIQILGGYGYVKDYPVERYWRDARLTRI--GEGTSEILKLV 378


>gi|221310335|ref|ZP_03592182.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314659|ref|ZP_03596464.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319582|ref|ZP_03600876.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323858|ref|ZP_03605152.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|1303933|dbj|BAA12589.1| YqiN [Bacillus subtilis]
          Length = 378

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 41/279 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL 257
           LTE   G+D  ++ +   K  +G Y L+G K F+++   +D +I  A     +GR G  +
Sbjct: 123 LTEPHSGSDAGSLRTTAIK-KNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHG--I 179

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
              ++E  +P G    + + K+G   + T EL F N               F   + +LN
Sbjct: 180 SAFIVEKNTP-GFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLN 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V             +  A  ++     +L  A+ YA++R   G  +     +   +AD+A
Sbjct: 239 VGR-----------IGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA  L +  A+  +   +  +EA+ A+  A                +A++  GG G
Sbjct: 288 TRAEAARHLVYHAADLHNRGLNCGKEASMAKQFASDAAVKAL--------DAVQIYGGYG 339

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           Y+++  + R  R++    I  G+     L +   L  GT
Sbjct: 340 YMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLGGT 378


>gi|239929900|ref|ZP_04686853.1| acyl-CoA dehydrogenase FadE7 [Streptomyces ghanaensis ATCC 14672]
 gi|291438235|ref|ZP_06577625.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291341130|gb|EFE68086.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 397

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 25/252 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P      AIG  GLTE   G+D A + ++ ++  DG  + L G K W  +  ++D  ++ 
Sbjct: 131 PRMAAGEAIGCFGLTEPDHGSDPAGMRTRARR--DGSDWVLDGTKMWITNGSVADVAVVW 188

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           AQ +  V  F+VP     G+P G   + +++K+  R++ T EL           +  ++ 
Sbjct: 189 AQTDEGVRGFVVP----TGTP-GFSARTIQHKMSLRASVTSELVLDGVRLPAEAVFPEVR 243

Query: 304 VSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              GP+  +    Y    I+  ++   R +   A+ YA +R   G  +    + +  +AD
Sbjct: 244 GLRGPLSCLNEARY---GILWGAMGAARSAFRSALEYAGQRTQFGRPIGGFQLTQAKLAD 300

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+++   T L+  L    D    R E+ +  ++         C+ A  +       +G 
Sbjct: 301 MAVELTNGTLLALHLGRRKDAVGLRPEQVSLGKLNNVNKALEICRTARTI-------LGA 353

Query: 422 SGYIEERSIARH 433
           +G   E  + RH
Sbjct: 354 NGISLEYPVIRH 365


>gi|257063646|ref|YP_003143318.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
 gi|256791299|gb|ACV21969.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
          Length = 398

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 31/287 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV- 249
            Q  ++     +TE+ GGT  A + +   K   G Y L+G KW +S      F  +  V 
Sbjct: 117 FQDKTIYCNFAITEQTGGTG-ADLHTTALKNEKGNYVLNGEKWLISHTDCSDFTYVIAVT 175

Query: 250 ------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
                 + R+  F VP    + +P G     + + +G R      L+F+N      +LLG
Sbjct: 176 DPESDKDSRLSAFFVP----NDAP-GFEIVEMPHMMGCRGAGHAGLKFNNVELEPIYLLG 230

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +    + V+   +   ++ I + +  M+   + ++L  A      R   G  +  + ++K
Sbjct: 231 EEGQGMEVAIHSLSVSRVHIAMSNLGMAQRMLEITLKRA----NDRITFGKPIASRQMIK 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA +   I       +  A  +D          Y    A I K    +    V  E +
Sbjct: 287 EKIARMQAHIHTLRCAIYDFARDYDIDPYNE----YVTEKAAICKLVSIETVKEVSDEML 342

Query: 417 ECIGGSGYIEERSIA---RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  GG GY E+       R YR+  A  +  G+ N   + +    +K
Sbjct: 343 EIFGGDGYFEDSPYGPTERLYRDCRAMWLEEGAPNVQKITIARECQK 389


>gi|205352923|ref|YP_002226724.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205272704|emb|CAR37618.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326627996|gb|EGE34339.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 24/265 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVG 254
           A  L LTE   G+D  + T+   + +  +Y L+G K F++      ++++     E +  
Sbjct: 119 AYALALTEPGAGSDNNSATTTWTRKNGKVY-LNGQKTFITGAKEYPYMLVLARDTEPKDP 177

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNVST 306
                    D +  G+    L +KIG    +T       VE++ S+  G   +G LNV  
Sbjct: 178 KKAFTLWWVDSNKPGIKINPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMY 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +A +A+ I
Sbjct: 237 NF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                +  ++A   D  +S        R  A + K +C + A  VI +A++ +GG GY +
Sbjct: 292 ENMRNMVLKVAWQADRKES-------LRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTD 344

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R +R+     I  G+   M+
Sbjct: 345 EARVSRFWRDVRCERIGGGTDEIMI 369


>gi|41406909|ref|NP_959745.1| FadE10 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395259|gb|AAS03128.1| FadE10 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 642

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 52/334 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    + DG  Y L+G K W  +  +++  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARLASTATPVDDGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPSENLVGREGDGLK 281

Query: 314 I-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L++  +S+        + +L  A  ++  R   G  L +   + R ++ IA  + 
Sbjct: 282 IALTTLNAGRLSIPASATGSAKWALKIAREWSGERVQWGKPLAEHEAVARKLSFIAATVY 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+    A   DE ++        RI A + K W  +MA  +  E M+  GG GY   
Sbjct: 342 ALDAVLELSAQMADEGRND------IRIEAALAKLWSSEMACVIADEVMQIRGGRGYETA 395

Query: 428 RSI-ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS--TLEQDLGSSGKKVI 484
            S+ AR  R  P   +L        L +  + E  + +   L +   ++  L ++G    
Sbjct: 396 ESLAARGERAVPVEQVLRD------LRINRIFEGASEIMRLLIAREAVDAHLAAAG---- 445

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
                   L K D G    L EK A A  A+  Y
Sbjct: 446 -------DLAKPDAG----LREKAAAAVGASGFY 468


>gi|323444840|gb|EGB01780.1| hypothetical protein AURANDRAFT_18178 [Aureococcus anophagefferens]
          Length = 269

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 36/233 (15%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV-ELEFSN----TFGFLLGDLNVSTG 307
           +  FLVP++LE+G  N +    + +K+G  ++    EL F +      G+L+G+      
Sbjct: 35  ISLFLVPKVLENGERNDVYLGGMNHKMGQIASVNAGELLFGDRTGAATGYLVGE------ 88

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQ-------PV 354
           P E +K +  + + +    GM  + +       A+ YAR R   G  L  +       P+
Sbjct: 89  PHEGLKCMFVMMNELRVGVGMGAAASGVAGYTAALRYARDR-AQGRPLTSKDPAAPMVPI 147

Query: 355 MKRAIADIALDIAAA-----TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYW 403
           ++ A     L  A A      ALS   A   D      +A ++ E      ++ P+ K W
Sbjct: 148 VQHADVKRMLLAARAYSEGGVALSLYGAELIDKMAVCEDAAAKQELHLVLELLIPMIKSW 207

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +        A++  GG+GY  +  + + YR++  NSI  G+     LD+L 
Sbjct: 208 PSEWGLEANRLAIQVHGGAGYTTDFIVEQLYRDARVNSIYEGTTGIQSLDLLG 260


>gi|302187962|ref|ZP_07264635.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae 642]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 33/279 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---- 236
           D    A ++K +    +G   LTE   G++   + ++ +   D  + ++G K F+S    
Sbjct: 105 DEQKHAWLEKLATGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKR 163

Query: 237 SPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           + ++  F +     G+ G   FLVP         G    R ++K+G R++ T  +  +N 
Sbjct: 164 AQLAIVFAVTDPSLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNC 218

Query: 295 ---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                 LLG+    L+++   +E  +I I    A  ++   R +   A+ YAR R     
Sbjct: 219 RIPAANLLGERGKGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDK 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+   I AA  L+   A      ++   EA+ A++ A     W C  
Sbjct: 275 PIIEHQSIANLLADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAEWVC-- 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                ++A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 333 -----SKAIQIHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|184200152|ref|YP_001854359.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183580382|dbj|BAG28853.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 400

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 111/278 (39%), Gaps = 31/278 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-- 247
           M K        LTE   G+D  ++ +  ++  D  + L+GHK W  +   +D  ++ A  
Sbjct: 125 MAKIEKTGAFALTEPTHGSDSVSLETSARRDGDH-WVLNGHKRWIGNGHAADVIVLYARD 183

Query: 248 QVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
           + +G+V CF+V +  EDG  P G     +  KIG R+         N    ++ DL +  
Sbjct: 184 EADGQVKCFVVEK-QEDGEYPQGYRPTVIDGKIGKRA--------INQADIVIEDLRIPE 234

Query: 306 TGPVEDMKILIYLDSAIMSVSG---------MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
              +E+      ++  + +  G            +   A +YA  R   G  + +  +++
Sbjct: 235 ENRLENCHSFKDVNKVLKATRGGASWEAVGHGMAAFEIAANYALEREQFGMPIANYQLVQ 294

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +  D+ +   L  R+A          E       MA + K    + A  +   A 
Sbjct: 295 ERLATMLSDLTSMQLLCTRMAQ-------LQESDQLTDAMASLVKMTTSRKALDMCRTAR 347

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + +GG+G + E  I RH  +    S   G+ +   L V
Sbjct: 348 DMLGGNGLLLENHIGRHLTDMEVVSTYEGTDSVQALIV 385


>gi|16759066|ref|NP_454683.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140616|ref|NP_803958.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213163020|ref|ZP_03348730.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213427514|ref|ZP_03360264.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213580150|ref|ZP_03361976.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213865066|ref|ZP_03387185.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289826202|ref|ZP_06545314.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|21542008|sp|Q8Z9L2|CAIA_SALTI RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|25284703|pir||AC0511 probable carnitine operon oxidoreductase CaiA STY0083 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16501356|emb|CAD01227.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136240|gb|AAO67807.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCTFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|148257879|ref|YP_001242464.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410052|gb|ABQ38558.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E + G+D+ ++ ++  K  D  + L+G K W  + P+++  ++ A+ + + G   +
Sbjct: 131 LAMSEPQAGSDVVSMKTRADKRGD-RFVLNGSKMWITNGPVAETLVVYAKTDPQGGPRGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              + +    G    +  +K+G R + T EL F        N  G +   +NV    ++ 
Sbjct: 190 TAFIIEKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEENVLGQVGRGVNVLMSGLDY 249

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + ++    A   +  M+  +   + Y   R   G  +    +++  +AD+   + AA A
Sbjct: 250 ERAVL----AAGPLGIMQACMDVVLPYVHERKQFGQPIGTFQLVQGKVADMYTTMNAARA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  E+AA A + A      C         +A++ +GG+GYI +    
Sbjct: 306 YVYAVAKACDRGETTREDAAGAILFAAEKATQCA-------LDAIQLLGGNGYINDYPTG 358

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 359 RLLRDAKLYEIGAGT 373


>gi|289742859|gb|ADD20177.1| very-long-chain acyl-CoA dehydrogenase [Glossina morsitans
           morsitans]
          Length = 625

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 134/323 (41%), Gaps = 40/323 (12%)

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP----MQKTSVAIGLGLTEKRGGTDI 211
           +  A+ + L  T   H+    K      +P  KA     +    V     LTE   G+D 
Sbjct: 137 IVGANDLGLGITIGAHQSIGFKGILLYGNPEQKAKYLPAVSTEKVYAAFALTEPSAGSDA 196

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVP 259
            +I  +  K SDG  Y L+G K W  +  ++D   + A+ E           +V  F+V 
Sbjct: 197 GSIKCKAVKSSDGKHYVLNGSKIWISNGGIADIMTVFAKTEVQDKKTGEKKEKVTAFIVE 256

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
           R     S  G+     + K+G +++ T E+ F        N  G       V+   + + 
Sbjct: 257 R-----SFGGVTNGPPEKKMGIKASNTAEVYFEDVKVPAENVLGEEGDGFKVAMNILNNG 311

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  +    A ++ + M+  + +A+ +A  R   G  L +   ++  IA + +   A  ++
Sbjct: 312 RFGM---GATLAGT-MKHCITKAVDHANNRLQFGKRLNEYIGIQEKIAQMNMLQYATESM 367

Query: 373 SFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +F ++ + D        EAA ++I A  + +  C        E+++ +GG G++++  + 
Sbjct: 368 AFSISQNMDAGSQDYHLEAAISKIFASESAWQVCD-------ESIQILGGMGFMKDTGLE 420

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R  R+     I  G+ + + L V
Sbjct: 421 RVMRDLRIFRIFEGTNDILRLFV 443


>gi|295700916|ref|YP_003608809.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440129|gb|ADG19298.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV  +
Sbjct: 125 MGVTEPTTGSDTTKLKTTAVK-KDGRWVVNGQKVWISRVQHSDLLILLARTTPIDQVRKK 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 184 SDGLSCFIVE--LDKTIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGTEGKGLKVI 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R+V G  +     ++  +A+  ++
Sbjct: 242 FDGLNAERTLI----AAECIGDGYWFLEKARDYASERNVFGRPIGQNQGIQFPLAESFIE 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + +R     D  ++       A + A + KY   K +       ++  GG G+ 
Sbjct: 298 LEAANLMRWRACQKIDARQN-------AGVEANMAKYLAAKASWEAANACLQTHGGFGFA 350

Query: 426 EERSIARHYRES 437
            E  + R +RE+
Sbjct: 351 CEYDVERKFRET 362


>gi|260433697|ref|ZP_05787668.1| glutaryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417525|gb|EEX10784.1| glutaryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 252

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG Y L+G K W  ++P++D F++ A+ +   G++  F++     D    GL   +++NK
Sbjct: 16  DGGYRLTGSKMWISNAPIADVFVVWAKSDAHDGKIRGFVL-----DKGTKGLSAPKIENK 70

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +  R++ T E+           LL  +    GP         L+ A   +S   +  AE 
Sbjct: 71  LSLRASITGEIVLDGVEVGEDALLPHVQGLKGPFG------CLNRARYGISWGVMGAAEC 124

Query: 336 IHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
             +A R++       ++P+      ++ +AD+  +IA     S R+    D+A++  E  
Sbjct: 125 CWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQASLRVGRLMDQAEAAPE-- 182

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                M  I K   C  A  +   A +  GG+G   E  + RH
Sbjct: 183 -----MISIIKRNNCGKALDIARMARDMHGGNGISLEFQVIRH 220


>gi|111225416|ref|YP_716210.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111152948|emb|CAJ64696.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 413

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 36/277 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-------------IYCLSGHKWFLSSPMSDAFI--ML 246
           ++E   G+D+AAITS+  + + G             +Y L+G K +L++      +  ++
Sbjct: 129 MSEPGCGSDVAAITSRADRKAGGGRNGEGEGDGDGDVYVLNGQKMWLTNGARAGIVATLV 188

Query: 247 AQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296
              EG       +  FL+ +    G+  G+      +K+G +   T E+  ++       
Sbjct: 189 KTDEGAESVYRNMTTFLLEKEPGFGTHGGITIPGSIDKLGYKGIETTEMILTDHRVPAAS 248

Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPV 354
            L GD     G  + M  + +   +      G+ +   E AI YA+ R   G  + +   
Sbjct: 249 ILGGDDGRGQGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQTRRAFGRPIAEHQA 308

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +A++A  + A   +    A   D  +    EA  A       KY   +    V  E
Sbjct: 309 IAFKLAEMATKVEAGHLMMVSAARKKDSGQRNDVEAGMA-------KYLASEYCHEVTTE 361

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A    GG GY +E  I R YRE+P   +L+G G + +
Sbjct: 362 AFRIHGGYGYSKEYEIERLYREAP--FMLIGEGTSEI 396


>gi|311693509|gb|ADP96382.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 393

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 21/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  + +   K  D  Y L+G K F+++  ++D  I++A+ + + G   +
Sbjct: 138 IAMTEPGAGSDLQGVKTTAVKNGDH-YVLNGSKTFITNGQLADVVIVVAKTDPKEGAKGI 196

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---MKIL 315
              + + +  G    +  NK+G ++  T EL F +     + + N+  GP E     +++
Sbjct: 197 SLFMVETAWEGFEKGQNLNKVGMKAQDTSELFFQDV---KVPEKNL-IGPGEGQGFFQLM 252

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L +  + V+   V+ AE      + Y + R+  G  +I     +  +A++  +I AA 
Sbjct: 253 QELAAERLQVALGAVAAAEAAWQWTLDYVKERNAFGKPVIAFQNTRFKMAEMKAEITAAR 312

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R      + K     AA   ++  +T    CK    V+ E ++  GG GY+ E  I
Sbjct: 313 VFTDRCLELHLDKKLDIPTAA---MLKQLTTDLQCK----VMDECVQLHGGYGYMWEYPI 365

Query: 431 ARHYRESPANSILLGSGNAM 450
           AR + +S    I  G+   M
Sbjct: 366 ARAWADSRVQRIYAGTNEIM 385


>gi|296140719|ref|YP_003647962.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028853|gb|ADG79623.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 411

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AA+++   +  D  + L+G K F++S   +D  ++ A V+   G    
Sbjct: 141 MAITEPSFGSDSAAVSATATRDGDE-WVLNGTKIFVTSGSRADHIVVWATVDKSAGRAAI 199

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTGP 308
             F+VPR        G+   RL++K+G +++ T E+ F +    F  +LG  ++NV  G 
Sbjct: 200 KSFVVPR-----EHPGVTVARLEHKLGIKASDTAEIRFEDCRIPFENILGSPEVNVEKGF 254

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPV--MKRAIAD-- 361
              M+     D+    V+ M + +A A +   R      GI ID   PV  +  A A+  
Sbjct: 255 AGVMQTF---DNTRPLVAAMAIGVARASLEELRTVLEDAGIAIDYDAPVNTLPHAAAEFI 311

Query: 362 -IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  L+ +     D     S  A+ A+  A        ++   V  +A+E  G
Sbjct: 312 RLESDWEAAYQLTLKSGWMADNKIPNSMNASMAKAKA-------GRVGSDVTLKAVELAG 364

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R+S    I  G+
Sbjct: 365 ALGYSERTLLEKWARDSKILDIFEGT 390


>gi|16764707|ref|NP_460322.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|62179945|ref|YP_216362.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|167551681|ref|ZP_02345435.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167994375|ref|ZP_02575467.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168233544|ref|ZP_02658602.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168239525|ref|ZP_02664583.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240863|ref|ZP_02665795.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168263819|ref|ZP_02685792.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168463239|ref|ZP_02697170.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168822219|ref|ZP_02834219.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194445957|ref|YP_002040613.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194451275|ref|YP_002045363.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470559|ref|ZP_03076543.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194738369|ref|YP_002114373.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250875|ref|YP_002146681.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197265471|ref|ZP_03165545.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|200390997|ref|ZP_03217608.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|207857137|ref|YP_002243788.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238910827|ref|ZP_04654664.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16419876|gb|AAL20281.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62127578|gb|AAX65281.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194404620|gb|ACF64842.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194409579|gb|ACF69798.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456923|gb|EDX45762.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194713871|gb|ACF93092.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633847|gb|EDX52199.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197214578|gb|ACH51975.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197243726|gb|EDY26346.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197287761|gb|EDY27151.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199603442|gb|EDZ01988.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205323659|gb|EDZ11498.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205327748|gb|EDZ14512.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205332329|gb|EDZ19093.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205339459|gb|EDZ26223.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205341315|gb|EDZ28079.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205347553|gb|EDZ34184.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206708940|emb|CAR33270.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261246565|emb|CBG24375.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993241|gb|ACY88126.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157893|emb|CBW17387.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912342|dbj|BAJ36316.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086163|emb|CBY95937.1| putative oxidoreductase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321223985|gb|EFX49048.1| Acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322714412|gb|EFZ05983.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129628|gb|ADX17058.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988244|gb|AEF07227.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 24/265 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVG 254
           A  L LTE   G+D  + T+   + +  +Y L+G K F++      ++++     E +  
Sbjct: 119 AYALALTEPGAGSDNNSATTTWTRKNGKVY-LNGQKTFITGAKEYPYMLVLARDTEPKDP 177

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNVST 306
                    D +  G+    L +KIG    +T       VE++ S+  G   +G LNV  
Sbjct: 178 KKAFTLWWVDSNKPGIKINPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMY 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +A +A+ I
Sbjct: 237 NF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                +  ++A   D  +S        R  A + K +C + A  VI +A++ +GG GY +
Sbjct: 292 ENMRNMVLKVAWQADREES-------LRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTD 344

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R +R+     I  G+   M+
Sbjct: 345 EARVSRFWRDVRCERIGGGTDEIMI 369


>gi|294932523|ref|XP_002780315.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239890237|gb|EER12110.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 905

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 23/300 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A I    +K S G  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 165 ICLAITEPTAGSDVANIRCSAKKSSCGKYYIVNGEKKWITNGIWADYFTVAVRTGGPGMD 224

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + +  G+  +R+K   G  S+ T  + F +       L+G  N      +  K
Sbjct: 225 GISLLLIEKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKVPIENLIGKEN------KGFK 277

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +++      L    ++    RV   EA+ +A +R   G  L+  PV++  + ++A  I 
Sbjct: 278 CIMHNFNHERLALCALTNRFARVCYEEALKHANKRKTFGKTLVQHPVIRFKLGEMARQIE 337

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY--- 424
           A  A   ++A                 + A + K  C K+      E+ +  GG  Y   
Sbjct: 338 ATHAWVEQVAYQVGTMHPLEANMKLGGVTA-LLKVQCTKVFEYCARESAQIFGGLSYSRG 396

Query: 425 -IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
            + E+ + R  RE  A ++  GS   M+   +  + K   + + L    EQ+  ++ K++
Sbjct: 397 GVGEK-VERLNREVRAMAVPGGSEEIMLDLGVKQMSKLAEMAKVLVEQAEQENAANKKQM 455


>gi|163855520|ref|YP_001629818.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259248|emb|CAP41548.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 48/318 (15%)

Query: 154 PSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           P+V  A+ +AL      +  D+A +   R+  P     +    + +   LTE   G+D A
Sbjct: 80  PAVDFATRIALQAWGSMILADFASEELKRDILPR----VATGELKLSFSLTEPSSGSDAA 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLA--------QVEGRVGCFLVPRLLE 263
           ++ +  ++  D  + L G K F S   + D  I++A        + EG +  FLVP  L 
Sbjct: 136 SLATSARRSGDD-WLLRGQKLFSSGAHAPDNMIIVAARTATGKSRHEG-ISLFLVPNDLP 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMKILI 316
                GL  QRL + IG R     E+ F +      +L+G        V    E  +I +
Sbjct: 194 -----GLHIQRL-DVIGRRILGLTEIFFDDVRIPSRYLIGADGSGWEYVGRHLERERITL 247

Query: 317 ---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              Y+ SA  +V        +A+ YA+ R   G  +     +   +AD+A ++     ++
Sbjct: 248 AANYIGSASSAVD-------DAVAYAKERRQFGKPIGKFQSIAHRLADMATELEVGRWIT 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A  +D      +EA+ A       K +  +M   V A  M+ +GG  Y  +  + R+
Sbjct: 301 AMAAWRYDNGLPCRKEASMA-------KLYVSEMLQRVTASGMQILGGHAYTADHDMQRY 353

Query: 434 YRESPANSILLGSGNAMV 451
           +R+  A +  +G G + +
Sbjct: 354 WRD--ARNATVGGGTSEI 369


>gi|91782260|ref|YP_557466.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91686214|gb|ABE29414.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 377

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 28/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + +G + L+G K F+++     ++  F +     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRAE-LHNGRWVLNGSKQFVTNAARAGVAIVFAVTDPTAGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+VP      +P G      + K+G R++ T  +   N     + + N+     E +KI 
Sbjct: 184 FIVP----TDTP-GFNVGPPEKKLGIRASDTCPVALENC---AIPEANLLGSRGEGLKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L+   + ++   + +A A       YA  R   G  L+    +   +AD+A  + AA
Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFEVARSYAHERVQFGEPLVRHQSVANLLADMATRLNAA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A      K    EA+ A++ A        +MA  V + A++  GG GY+ +  
Sbjct: 296 RFLVHHAARLRTLGKPCLSEASQAKLYA-------SEMAEEVCSHAIQIHGGYGYLNDYP 348

Query: 430 IARHYRESPANSILLGS 446
           + RHYR++    I  G+
Sbjct: 349 VERHYRDARITQIYEGT 365


>gi|78222924|ref|YP_384671.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194179|gb|ABB31946.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 379

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D  AI +  ++  D  + ++G K F+++       ++ A  +  +    V  
Sbjct: 125 LTEPDAGSDAGAIATTYRREGDE-FVINGSKIFITNGGYRGTGVLFATSDKSLKHKGVSA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + D   +G+   + + K+G R + T      N     +   N+     +  KI +  L+
Sbjct: 184 FIIDLRSHGVEILKNEKKLGIRGSYTTAFALDNV---RIPAENLLGQEGQGFKIAMDTLN 240

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AE     A+ Y++ R   G  + D   ++  +AD+   I  +  +++
Sbjct: 241 GGRIGIASQALGIAEGAFERALAYSKERKQFGAPICDLQAIQFKLADMWAKIETSKLMTY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D  K+ + E+A  +++A        + A  V  EA++  GG G+I +  + R Y
Sbjct: 301 KAAWLKDHKKNYTMESAMCKMLAS-------EAATYVTKEAIQIHGGYGFICDYEVERMY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++    I  G+     + +  LL
Sbjct: 354 RDAKITEIYEGTNEVQRVVISKLL 377


>gi|311069796|ref|YP_003974719.1| FAD dependent acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310870313|gb|ADP33788.1| FAD dependent acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 594

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 73/322 (22%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPR 260
           ++ RG    A +   G       Y L+G K W  +S  +D F++ A+++G +   F+V  
Sbjct: 157 SDARGAKTTAVLNEAGTH-----YILNGEKQWITNSAFADVFVVYAKIDGDKFSAFIV-- 209

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL------------LGD 301
             E   P G+     + K+G + ++T        E+   N  G +            +G 
Sbjct: 210 --EKDYP-GVSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHIIAFNILNIGR 266

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             ++ G +   K +I L +A                YA +R      +    + +  IA 
Sbjct: 267 YKLAVGTIGASKRIIELSAA----------------YANQRRQFNTPISSFALTQEKIAT 310

Query: 362 IALDIAAATALSFRLANSFDEAKS-RSEE------------AAYARIMAPITKYWCCKMA 408
           +A  + A  +  +R    F+E  S  +EE            A YA I   + K +  +  
Sbjct: 311 MASKLYAMESSVYRTVGLFEENMSVLTEEDQKDGRQVAKSIAEYA-IECSLNKVFGSETL 369

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVL----------DVLN 456
             ++ E ++  GG G+++E  + R YR+S  N I  G+   N M++            L 
Sbjct: 370 DYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRMIVPSTFLKKAIKGELP 429

Query: 457 LLEKGTNLFEQLFSTLEQDLGS 478
           L EK   L E+L   + ++ GS
Sbjct: 430 LFEKAQALQEELMMLMPEEPGS 451


>gi|114675641|ref|XP_001170249.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 5 [Pan
           troglodytes]
          Length = 426

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 165 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 221

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 222 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 277

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 278 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 336

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 337 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 389

Query: 432 RH 433
           RH
Sbjct: 390 RH 391


>gi|108800709|ref|YP_640906.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869848|ref|YP_939800.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436332|ref|YP_001072023.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771128|gb|ABG09850.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695937|gb|ABL93010.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236132|gb|ABN99532.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 404

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 55/265 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252
            G+TE   G D + IT+  ++  D  Y ++G K ++S  +    I+L        +V  +
Sbjct: 140 FGVTEPGAGLDTSRITTFAKRDGDS-YVVNGRKVWISKALESEKILLLTRTTPYDEVTKK 198

Query: 253 V-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G  L    L+    +     R   K+G  + ++ EL         + DL +   PVED
Sbjct: 199 TDGMTLFMTDLDRAHVD----IRPIAKMGRNAVSSNEL--------FIDDLRI---PVED 243

Query: 312 ---------MKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPV-MK 356
                      IL  L+   M ++       R++L +A+ YA  RHV      D+P+ M 
Sbjct: 244 RVGEEGRGFFYILDGLNPERMLIAAEALGIGRIALDKAVKYANDRHV-----FDRPIGMN 298

Query: 357 RAI----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           + I    AD    + AA  +  +    +D  KS   EA  A       KY C        
Sbjct: 299 QGIQFPLADSLARLDAAELMLRKATWLYDNGKSCGREANTA-------KYLCADAGFTAA 351

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
             A++  GG GY EE  +AR +RE+
Sbjct: 352 DRALQTHGGMGYAEEYHVARFFREA 376


>gi|86740866|ref|YP_481266.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567728|gb|ABD11537.1| Butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 399

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 24/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253
           ++E   G+D++AIT++  +  D  Y L+G K +L++      +  ++   EG       +
Sbjct: 129 MSEPGCGSDVSAITTRADRDGDE-YVLNGQKMWLTNGARAGVVATLVKTDEGAQSVYRNM 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
             FL+ +     +  G+       K+G +   T E+  ++        L G+     G  
Sbjct: 188 TTFLLEKEPGFRTHGGITIPGKLEKLGYKGVETTEMVLADHRVPASAILGGEAGRGQGFY 247

Query: 310 EDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M  + +   +      G+ +   E  I YA++R   G  + +   +   +A++A  + 
Sbjct: 248 QMMDGVEVGRVNVAARACGIMIRAFELGIAYAQQRRTFGRPIAEHQAIAFKLAEMATKVE 307

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   +    A   D+ +    EA  A       KY   +    V  EA    GG GY +E
Sbjct: 308 AGHLMMVSAARRKDDGQRNDVEAGMA-------KYLASEYCHEVTTEAFRIHGGYGYSKE 360

Query: 428 RSIARHYRESPANSILLGSGNAMV 451
             I R YRE+P   +L+G G + V
Sbjct: 361 YEIERLYREAP--FMLIGEGTSEV 382


>gi|331696739|ref|YP_004332978.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326951428|gb|AEA25125.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 390

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 47/255 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGRVG 254
           +TE   G+D   I ++ ++  D  + +SG K F++      F +L  V       +G V 
Sbjct: 129 ITEPGAGSDARNIRTRARRDGDD-WVISGEKTFITGGHEADFCILFAVTDPELGADGGVT 187

Query: 255 CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           CFLV R           + +  P  L +  ++    N                +LG+  V
Sbjct: 188 CFLVDRDMGWTSSPIPTMGEWGPASLSFDEVRVPSRN----------------VLGE--V 229

Query: 305 STGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             G  + ++ +    YL  A    S  R+ L  A+ YA+ R   G  + +   ++  IAD
Sbjct: 230 GKGFEKALRWIGQGRYLIPARAVGSAERL-LGMAVDYAKVRESMGHKIAEYQAIQWQIAD 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A++I +   L+         A  R+E    AR    I K     MA  V+   ++  GG
Sbjct: 289 SAVEIESTKWLTL-------HAAWRAETGRDARHATSIAKLTGALMANQVVDRVLQIHGG 341

Query: 422 SGYIEERSIARHYRE 436
            GY +E  + R YRE
Sbjct: 342 MGYTKELPVERWYRE 356


>gi|300780648|ref|ZP_07090503.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
 gi|300533634|gb|EFK54694.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
          Length = 399

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 42/261 (16%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248
           M K  +     LTE   G+D   + +  ++  D        KW     +    ++ A+  
Sbjct: 132 MSKLEIRGAFALTEPDHGSDSIGLETTAERDGDEWVINGEKKWIGHGSVGHIAVVWARDT 191

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G+V  F+V     D   +G   + +  K   R      ++ +N        + VS   
Sbjct: 192 SDGQVKGFIV-----DQDQDGYEAETITGKASLRGIPQAHIKLNN--------VRVS--- 235

Query: 309 VEDMKIL---IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353
            ED ++     + D+A + ++G R+S+A            +A+ YA+RR   G  L+   
Sbjct: 236 -EDRRLPNANSFRDTAKV-LAGTRISVAWASLGLATDCYEKALDYAQRRTQFGRPLVKNQ 293

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  D+ +      RL    +  +   ++AA A++        C + A  + A
Sbjct: 294 IIQQRLADMLQDLTSMFLYCRRLLELEESGEITEQQAALAKVH-------CTRAARKISA 346

Query: 414 EAMECIGGSGYIEERSIARHY 434
           +A +  GG G + E  +ARH+
Sbjct: 347 DARDMFGGVGILLENDVARHH 367


>gi|167561442|ref|ZP_02354358.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 582

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 51/301 (16%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVG------- 254
           TE + G+D+ A+ +    + D +Y ++G K ++S+ M D     L  V GR+G       
Sbjct: 170 TEPQAGSDMTAVRTVATPLGDDVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTALDSF 229

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLK-----NKIGNRSNATVELEF---SNTFGFLLGDLN 303
              C +VPR   + +   L    ++      K+G    A   L F     T   LLG+  
Sbjct: 230 SLSCLIVPRFWRNDATGKLESNHVECVAVPRKMGLNGCANTHLVFGRSGTTRAHLLGNRK 289

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI---------- 348
                V  ++++  ++ A M      + +A     +++ YARRR     I          
Sbjct: 290 N----VGLLQLVPLMNQARMGTGLFGIGVASSAYLQSVSYARRRVQGRPIDSASDTAAPR 345

Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYAR------I 395
             +++   ++R + D+   +     L  +L  +       EA   ++ A   R      +
Sbjct: 346 VRIVEHGDVQRMLVDMKARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLL 405

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +    A  +   A++  GG GY +   + ++ R+    SI  G+      D++
Sbjct: 406 LTPICKAFISDQAWRICETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLV 465

Query: 456 N 456
            
Sbjct: 466 R 466


>gi|148703116|gb|EDL35063.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Mus
           musculus]
          Length = 571

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448
           GSGY+++    R  R+  A  +L+  GN
Sbjct: 407 GSGYMKDYPYERMLRD--ARILLIFEGN 432


>gi|47220275|emb|CAG03309.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 406

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 37/249 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCF 256
            GLTE   G+D + + ++ +   S   + +SG K W  +SP++D  ++ A+ +  RV  F
Sbjct: 145 FGLTEPNHGSDPSGMETRARYNPSSDTFSISGAKSWITNSPVADIAVVWAKCDDDRVRGF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           ++ R ++     G    +++ K   R++AT       VE+   N    LL + +   GP 
Sbjct: 205 ILERGMK-----GFSTPKIEGKFSLRTSATGMILMDEVEVPKDN----LLPNASGLAGP- 254

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364
                   L++A   +S   +  AE   +  R++    I    P+     M++ +AD+  
Sbjct: 255 -----FGCLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLMQKKMADMLT 309

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I         L    D+ K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 310 EITIGLQSCLALGRLIDQKKAVPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 362

Query: 425 IEERSIARH 433
            +E  I RH
Sbjct: 363 SDEYHIIRH 371


>gi|311743430|ref|ZP_07717236.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312560|gb|EFQ82471.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 462

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 40/331 (12%)

Query: 143 MAQLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +A +  G + S +V+    A  +A   T    + W P++ + E+                
Sbjct: 146 LAGVSLGSVASVTVSLGLGAGTIASKGTLEQKERWLPRLVTAEH-------------IAA 192

Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
             +TE   G+D    +T+  ++  D  Y L+GHK F+++ P +D  ++ A+++   G  +
Sbjct: 193 WAITEPESGSDAFGGMTTTVRRDGDD-YLLTGHKTFITNGPYADVIVVYAKLDEGDGTPV 251

Query: 258 VPR----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             R     + D   +GL       K+G  S+ T EL F     T   LLG     TG  +
Sbjct: 252 RDRPVLTFVLDRGMDGLVQGAPFKKMGMMSSPTGELFFDRVRLTPDRLLGG-EKPTGGSD 310

Query: 311 DMK-------ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           D +       ++  +  A++S+  ++     +I YAR+R + G  + D  +++  +A + 
Sbjct: 311 DGRESARQNFVMERVGCAVLSLGIIQECHRLSIDYARQRELWGRPIGDLQLIQLKLAKME 370

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +       + F         +  S   A A       K +  ++A  V  +A++  GG+G
Sbjct: 371 VARLNVQNMVFSALEHLRSGRMPSLAEASA------VKLYSTEVATDVAMDAVQLFGGNG 424

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454
           Y+ E  + +  R++ +  I  GS    V  V
Sbjct: 425 YMAEYRVEQLARDAKSLMIYAGSNEVQVTHV 455


>gi|161614232|ref|YP_001588197.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|204927659|ref|ZP_03218860.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|161363596|gb|ABX67364.1| hypothetical protein SPAB_01977 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|204323001|gb|EDZ08197.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322616741|gb|EFY13650.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619999|gb|EFY16872.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622310|gb|EFY19155.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627833|gb|EFY24623.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633068|gb|EFY29811.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636686|gb|EFY33389.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641289|gb|EFY37930.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647397|gb|EFY43889.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650219|gb|EFY46633.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655793|gb|EFY52095.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660119|gb|EFY56358.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665315|gb|EFY61503.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669572|gb|EFY65720.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673498|gb|EFY69600.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677425|gb|EFY73489.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679911|gb|EFY75950.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687383|gb|EFY83355.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192500|gb|EFZ77730.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198645|gb|EFZ83746.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204072|gb|EFZ89086.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208691|gb|EFZ93629.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210862|gb|EFZ95733.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217668|gb|EGA02383.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323227553|gb|EGA11712.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229470|gb|EGA13593.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232693|gb|EGA16789.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240269|gb|EGA24313.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242743|gb|EGA26764.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246564|gb|EGA30540.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252802|gb|EGA36639.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256708|gb|EGA40437.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260099|gb|EGA43724.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267136|gb|EGA50621.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271540|gb|EGA54961.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 383

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 24/265 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGRVG 254
           A  L LTE   G+D  + T+   + +  +Y L+G K F++      ++++     E +  
Sbjct: 119 AYALALTEPGAGSDNNSATTTWTRKNGKVY-LNGQKTFITGAKEYPYMLVLARDTEPKDP 177

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNVST 306
                    D +  G+    L +KIG    +T       VE++ S+  G   +G LNV  
Sbjct: 178 KKAFTLWWVDSNKPGIKINPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMY 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +A +A+ I
Sbjct: 237 NF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                +  ++A   D  +S        R  A + K +C + A  VI +A++ +GG GY +
Sbjct: 292 ENMRNMVLKVAWQADREES-------LRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTD 344

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  ++R +R+     I  G+   M+
Sbjct: 345 EARVSRFWRDVRCERIGGGTDEIMI 369


>gi|224584133|ref|YP_002637931.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468660|gb|ACN46490.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 383

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 24/276 (8%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ +   + A  L LTE   G+D  + T+   + +  +Y L+G K F++      +++
Sbjct: 108 TAESTLATGAPAYALALTEPGAGSDNNSATTTWTRKNGKVY-LNGQKTFITGAKEYPYML 166

Query: 246 L--AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFG 296
           +     E +           D +  G+    L +KIG    +T       VE++ S+  G
Sbjct: 167 VLARDTEPKDPKKAFTLWWVDSNKPGIKINPL-HKIGWHMLSTCEVYLDNVEVDESDRVG 225

Query: 297 FL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    ++
Sbjct: 226 EEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMI 280

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A+ I     +  ++A   D  +S        R  A + K +C + A  VI +A
Sbjct: 281 QEKLALMAIKIENMRNMVLKVAWQADREES-------LRTSAALAKLYCARTAMEVIDDA 333

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 334 IQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|299770986|ref|YP_003733012.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298701074|gb|ADI91639.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 379

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 47/299 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             V   + +TE   G+D+ AI +Q   + +  Y
Sbjct: 102 TEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQA-ILENDHY 147

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+ + +D  +++A+ + +     +   L D + +G+   R   KIG  +  
Sbjct: 148 RINGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALDGVKKGRSLQKIGLHAQD 207

Query: 286 TVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           T EL F +               F +L+ +L     P E + I      ++M++  +  +
Sbjct: 208 TAELFFDDVCVPTTQRLGEEGQGFAYLMQEL-----PRERLSI------SMMALGSILGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +     Y   R   G     QP+ +  + +    +A A   +       D+  +  ++  
Sbjct: 257 IEITKDYVLERKAFG-----QPLSQ--MQNTRFVLANAQIKAKAAQAFVDQCAALYQQHL 309

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +       K +       VI + ++  GG GY++E  I+R + ++    I  G+   M
Sbjct: 310 LSVTQVAALKCFITDAQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368


>gi|111018621|ref|YP_701593.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818151|gb|ABG93435.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 395

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 35/279 (12%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VG 254
           ++   LTE   GT  A + S   +  DG Y L+G KW ++ S ++  FI+ A+     V 
Sbjct: 127 SVAFALTEPGFGTG-ADLGSTAVREGDG-YILNGEKWLITNSDIASHFIVFAKTTATDVS 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVPR       +GL    L   +G +      +   +        + V     E ++ 
Sbjct: 185 AFLVPR-----ETDGLSIAALPETMGCKGTEHGRVTLDSVRVPATALVGVEGQGNEHLER 239

Query: 315 LIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + +    ++ S +  S   L  +I +A+ R   G  +  +  ++R +A++A D+ A   
Sbjct: 240 ALEISRVFIAASSLGTSERALELSIAHAKSRVTFGKPIGTRQAIQRYLAEMATDVYALRG 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A  +D  +    EA+       + K +  +    V   A+   GG GY     I 
Sbjct: 300 ILADAAQKWDAGERIPAEAS-------MCKLFGLEAVGRVTDRALLIHGGIGYTRAHPIE 352

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           R YR++                 LN LE+GT   + L +
Sbjct: 353 RLYRDAR----------------LNWLEEGTPTIQYLVT 375


>gi|86136856|ref|ZP_01055434.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826180|gb|EAQ46377.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI--MLAQVEG----- 251
           L +TE   G+D+  + +  +K  D  + L+G K F+S + ++D  I  M   VE      
Sbjct: 123 LAMTEPDAGSDLRGMKATARKDGDD-WILNGTKHFISHADIADFAICFMATGVEDTPRGP 181

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG+++   
Sbjct: 182 KKKITAFFVDK----GAP-GFAVRDGYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  ++ YA  R   G  +     +   +AD+AL++
Sbjct: 237 DVANTWLGATRLQVAATCLGRAERALQHSVEYAAERKQFGQQIGKFQGVSFKLADMALEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+      + + A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAANLLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|307592215|ref|YP_003899806.1| acyl-CoA dehydrogenase domain-containing protein [Cyanothece sp.
           PCC 7822]
 gi|306985860|gb|ADN17740.1| acyl-CoA dehydrogenase domain protein [Cyanothece sp. PCC 7822]
          Length = 539

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 24/167 (14%)

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG +       +D+ +   L  A  SV  M+      + YA  R +  G L+D PV   
Sbjct: 239 LLGQIGSGMTVAQDVMLYTRLAIAAKSVGAMKRCAQLMLKYATGRDIGTGKLMDNPVTLV 298

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA-PAVIAEA- 415
            ++++   I A   L + LA   D   S            P   Y  CK + P  + +A 
Sbjct: 299 RMSNLTAAITAVETLVYGLAELLDRGVS-----------VPTEAYIACKTSGPEFLGQAA 347

Query: 416 ---MECIGGSGYIEERSI------ARHYR--ESPANSILLGSGNAMV 451
              ++ +GG GYIE          AR +R  E P  ++ +  G+++V
Sbjct: 348 DDLIQLLGGRGYIETNIAPQILRDARIFRIFEGPTETLNMFFGSSLV 394


>gi|239945608|ref|ZP_04697545.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239992077|ref|ZP_04712741.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291449065|ref|ZP_06588455.1| long-chain-acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|291352012|gb|EFE78916.1| long-chain-acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 22/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +  +   D  + L+G K F+S+  ++D  I++A+     G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAEDKGDH-WLLNGSKTFISNGILADLVIVVAKTTPEGGAKGL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++ +    G    R  +KIG +S  T EL F++       LLG+L+ +      + ++
Sbjct: 183 SLIVVERGAEGFERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELDGAF-----IHLM 237

Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    M ++   ++ AE +      Y + R   G  L     ++  IA++A + A   
Sbjct: 238 TNLAQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAVTR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                     D       +     + A + K+W  ++   V    ++  GG GY+ E  +
Sbjct: 298 TF-------LDRCIVDHSDGVLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEYKV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           A+ + +    +I  G+   M
Sbjct: 351 AKAFTDGRIQTIYGGTTEIM 370


>gi|295840259|ref|ZP_06827192.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197698764|gb|EDY45697.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 409

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YAR R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEVALEYARTRTQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMAAT 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R+S   +I
Sbjct: 334 GKP------FTSAEGSMSKLFASETAKQVSAQAIQILGGNGYTREYPVERMHRDSAIYTI 387

Query: 443 LLGS 446
             G+
Sbjct: 388 FEGT 391


>gi|321312828|ref|YP_004205115.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320019102|gb|ADV94088.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis BSn5]
          Length = 594

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 57/340 (16%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            +        G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 EKEF-----PGVSTGPEEKKMGIKGSSTRTLILDQAEVPKEN----LLGE--IGKGHVIA 258

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             IL      L    +  S   + L+ A  YA +R      +    + +  I  +A  + 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSAA--YANQRRQFKTPIAGFSLTQEKIGTMASRLY 316

Query: 368 AATALSFRLANSFDEAKSR--SEEAAYARIMAP----------ITKYWCCKMAPAVIAEA 415
           A  +  +R    F++  S+  +E+    R +A           + K +  +    ++ E 
Sbjct: 317 AMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEG 376

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
           ++  GG G+++E  + R YR+S  N I  G+     L V            L L EK  +
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKKALKGELPLFEKAQS 436

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           L E+L   + ++ GS       +L     + K+ K +A F
Sbjct: 437 LQEELMMLMPEEPGSG------VLEQEKYIVKQAKKIALF 470


>gi|114705183|ref|ZP_01438091.1| acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
 gi|114539968|gb|EAU43088.1| acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
          Length = 418

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 124/295 (42%), Gaps = 39/295 (13%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIML 246
           P+ +  V     +TE    GG+D + + ++  +  D  + ++G KWF++ +  +D F+++
Sbjct: 135 PIVEGKVRSAFAMTEPEPGGGSDPSMMLTRAVRDGDD-WVVNGRKWFITGAEAADHFMLI 193

Query: 247 AQV--EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
           A+   + R G  CFL  +      PN    +R+            ELEF++       +L
Sbjct: 194 AKTADDKRRGHTCFLFHK----SQPNWKIVRRIPIMGPEEHGGHCELEFTDFRIPHSDIL 249

Query: 300 GD-------LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           G+       +    GP      + +L  A   V         A  YA RR   G  LID+
Sbjct: 250 GEEGRGLKVVQTRLGPARLTHCMRWLGLAKRCVE-------IATDYAERREGFGVKLIDR 302

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  + D+A+ I     L  + A   D+ +   +E + A+I           +     
Sbjct: 303 ESVQVMLGDLAMQIEVGRLLVMKAAWEIDQGRYGQKEISMAKIH-------VANLLHTAA 355

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVLDVLNLLEKGTNLF 465
             A++  G  GY ++  +   YR +    ++ G+   + MVL+  +L + GT+ +
Sbjct: 356 DRAIQINGARGYSKDTVLEWIYRYARQARLVDGADEVHKMVLN-RHLGDLGTDFW 409


>gi|16080334|ref|NP_391161.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311228|ref|ZP_03593075.1| hypothetical protein Bsubs1_17806 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315555|ref|ZP_03597360.1| hypothetical protein BsubsN3_17722 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320470|ref|ZP_03601764.1| hypothetical protein BsubsJ_17685 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324754|ref|ZP_03606048.1| hypothetical protein BsubsS_17836 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669038|sp|O32176|FADE_BACSU RecName: Full=Probable acyl-CoA dehydrogenase
 gi|2635778|emb|CAB15271.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 594

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 57/340 (16%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            +        G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 EKEF-----PGVSTGPEEKKMGIKGSSTRTLILDQAEVPKEN----LLGE--IGKGHVIA 258

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             IL      L    +  S   + L+ A  YA +R      +    + +  I  +A  + 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSAA--YANQRRQFKTPIAGFSLTQEKIGTMASRLY 316

Query: 368 AATALSFRLANSFDEAKSR--SEEAAYARIMAP----------ITKYWCCKMAPAVIAEA 415
           A  +  +R    F++  S+  +E+    R +A           + K +  +    ++ E 
Sbjct: 317 AMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEG 376

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
           ++  GG G+++E  + R YR+S  N I  G+     L V            L L EK  +
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKKALKGELPLFEKAQS 436

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           L E+L   + ++ GS       +L     + K+ K +A F
Sbjct: 437 LQEELMMLMPEEPGSG------VLEQEKYIVKQAKKIALF 470


>gi|315444457|ref|YP_004077336.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315262760|gb|ADT99501.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 39/277 (14%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGI--YCLSGHKWFLSS-PMSDAFIMLAQVEG------ 251
           +TE   G+D    + S   + +DG   Y L+G K F+++ P +D  ++ A+++       
Sbjct: 145 ITEPDSGSDAFGGMKSWVARAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEPGVDKR 204

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +V  F++ + +E     G    +   K+G  S+ T EL F+N     LG   +  G  
Sbjct: 205 DRKVLTFVLDKGME-----GFVQSKPFRKMGIHSSRTGELFFNNV---RLGRDRL-LGET 255

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKR 357
           ED +     DSA  S S  R+ +A             ++ YA+ R + G  +    +++ 
Sbjct: 256 EDNEAGDGRDSARSSFSAERIGVAAMALGVIEECLRLSVDYAKTRKLWGQEIGQFQLIQL 315

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A + +       + FR+  S       S   A A       K++C + A  V  +A++
Sbjct: 316 KLATMEVARMNVRNMLFRVIESSQSGAPISLAEASA------IKWYCSQAATDVAMDAIQ 369

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG+GY+ E  + +  R++ +  I  GS    +  V
Sbjct: 370 LFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHV 406


>gi|260770182|ref|ZP_05879115.1| putative acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
 gi|260615520|gb|EEX40706.1| putative acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
          Length = 389

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +   I+ A+ +       +
Sbjct: 130 LAMSEPNAGSDVVSMQLKAERQGDH-FVLNGSKMWITNGPDAQVVIVYAKTDPNAKSRGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R      P     Q+L +K+G R + T EL F N       +LG+LN     +E
Sbjct: 189 TAFIVERDF----PGFYSAQKL-DKLGMRGSNTCELVFENCHVPTENILGELNQG---IE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  L   + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACLDLVLPYVHDRKQFGHAIGEFQLVQAKVADMYTRLN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +AN+ D  +   +++A   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AARAYVYAVANACDRGEVTRKDSAGVIL-------YAAELATQMALDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
               R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 FPAGRLLRDAKLYEI--GAGTSEIRRIL----IGRELFEE 387


>gi|321264333|ref|XP_003196884.1| hypothetical protein CGB_K3730W [Cryptococcus gattii WM276]
 gi|317463361|gb|ADV25097.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 253

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 25/225 (11%)

Query: 229 SGH-KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +GH  WF    ++D+    +   G  G F+V     D    G+   + +  +G R++ T 
Sbjct: 28  AGHANWFFVLAITDS--KASPTRGMTG-FIV-----DADTEGIILGKKEINMGQRASDTR 79

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARR 341
            + F +    ++ + NV   P E  KI +   D     VS   V LA     EA  YA+ 
Sbjct: 80  MVTFQDV---VIPEENVLGSPGEGFKIAMKAFDITRPLVSAAAVGLAQRALEEATKYAQE 136

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           RH  G  +I+   +   +AD+A+ + AA  L ++ A + D  +  +  A+ A+  A  T 
Sbjct: 137 RHTMGQPIINHQGVAFMLADMAIGVEAARGLVWKAAWAKDCMQRNTFYASMAKAFAGKTA 196

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +        ++  GG+G+  E  + + YR++    +  G+
Sbjct: 197 VENANL-------GVQVFGGAGFNTEMPMEKLYRDAKIYELYEGT 234


>gi|158424133|ref|YP_001525425.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331022|dbj|BAF88507.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 390

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
            G+TE   GTD  A+ +  +K  D  Y ++G K W   +  SD  ++LA      QV+ R
Sbjct: 125 FGVTEPTSGTDTTALKTFAEKRGD-YYVVNGQKVWTSRAEHSDLMLLLARTTPRDQVQKR 183

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  F+V   + +   NGL  + ++  +   +++T E+ F N               F
Sbjct: 184 TDGLSVFIVD--MREAKGNGLTIRPIRAMM---NHSTTEVFFDNMKVPAENLVGEEGKGF 238

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   V   +  + +A  YA+ R V G  +     +
Sbjct: 239 RYILSGMNAE-------RILI----AAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGV 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +  R A+ F+  +   +EA  A+++A          + A     
Sbjct: 288 QFPIAKAYAQMRAAELMVHRAASLFEAGQDCGQEANMAKMLA-------ADASWAAAEAC 340

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+ EE  + R +RE+
Sbjct: 341 VQTHGGFGFAEEYDVERKFRET 362


>gi|145242990|ref|XP_001394044.1| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134078711|emb|CAK48273.1| unnamed protein product [Aspergillus niger]
          Length = 511

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 28/174 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +    D F+   + E      L
Sbjct: 244 LAVTEAFAGSDVAGLRTTAKKTPDGKHYIVNGTKKWITNGMFCDYFVTGCRTEKGFSVLL 303

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +PR        G+  +++K      + AT  ++F N       LLG+        ED   
Sbjct: 304 IPR------DEGVETKQIKTSYST-AAATAFVQFENVKVPVENLLGE--------EDKGF 348

Query: 315 LIYL-----DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIA 360
           ++ +     +  +M  S +R+ +    E + +  +R V G  LI+QPVM++ +A
Sbjct: 349 IVIMSNFNHERFMMVCSVVRMCMTVVEECMKWCNQRIVFGKKLIEQPVMRQKLA 402


>gi|257063645|ref|YP_003143317.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
 gi|256791298|gb|ACV21968.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
          Length = 388

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           + +A+ +AR R   G  + D   ++  + ++ + +     L +  A  +D  + +     
Sbjct: 258 MEDAVAWARGREAFGQRIADLQQVQMKLTEMEVKLTNMRNLVYGAAREYDRGEHK----- 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             R+   + KY+  K A  V ++AM+ +GG GYI+E  ++  +++        G+   MV
Sbjct: 313 --RLSVALMKYYVPKAATEVASDAMQILGGRGYIQENRVSSIWQDCRGYQFADGTDEVMV 370

Query: 452 L 452
           +
Sbjct: 371 V 371


>gi|289621314|emb|CBI52097.1| unnamed protein product [Sordaria macrospora]
          Length = 438

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 38/261 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  +K  DG Y +SG K W   + ++D  ++LA+          
Sbjct: 163 FGVTEPNAGLDTLRLETFAKKQDDGSYSVSGQKIWITCAQVADKMMLLART--------T 214

Query: 259 PRLLEDGSPNGLCY---------QRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           PR        GL            RLK     K+G R+    E+ F N   + +   ++ 
Sbjct: 215 PREEAKKPSEGLSLFCIDLNRDDHRLKVSKIKKMGGRAVDANEVFFEN---YPISGDSLI 271

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               +  KI+++ +++    ++G  +     +L +A  YAR R V    +     +   +
Sbjct: 272 GKEGQGFKIILHGMNAERCLLAGEALGLGYAALGKAAEYARERVVFQRPIGQNQGIAHPL 331

Query: 360 ADIALDIAAATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           AD+ + + AA   ++  A  +D +K+    R EE   A   A   KY   + A A    A
Sbjct: 332 ADVYMRLEAAKHATYHAARLYDASKTDGSIRQEEVGVACNSA---KYLAAEAAFAACERA 388

Query: 416 MECIGGSGYIEERSIARHYRE 436
           +   GG GY  E  + R++RE
Sbjct: 389 VLTHGGMGYAVEYDVERYFRE 409


>gi|283834091|ref|ZP_06353832.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|291070237|gb|EFE08346.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 381

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           R+ AP+ K +C + A  VI +AM+ +GG GY  +  ++R +R++  N I  G+   MV
Sbjct: 311 RLSAPMCKLYCAQSACEVIDDAMQILGGLGYTNDSRVSRFWRDTRVNRIGGGTDEIMV 368


>gi|221120553|ref|XP_002165738.1| PREDICTED: similar to acyl-CoA dehydrogenase (3J649) [Hydra
           magnipapillata]
          Length = 439

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 20/260 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLV 258
           LG++E   G+D++AI +   K  D      G  W  +   +D   +LA   EG+      
Sbjct: 178 LGVSEVGAGSDVSAIKTTAVKRGDDYVINGGKMWTTNGAQADWMCLLANTSEGKNPHLNK 237

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             +       G+  Q    K+G  S+ TV++ F +      + +G+  +  G V  MK  
Sbjct: 238 SLICVPMKTKGIVVQPRMKKLGMHSSDTVQIFFEDVVVPQKYRIGEEGL--GFVYQMK-- 293

Query: 316 IYLDSAIM-SVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + D  ++ SVS + +    + +  +Y  +R   G  L+   V+   +A++  ++    +
Sbjct: 294 QFQDERLVGSVSALTICDRCIRQTANYCHQRKAFGKTLLSNQVIHFKLAELQTEVEMLRS 353

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             +R  + + + K  +  A+  ++ A        ++   V    ++  GG GY+E   I+
Sbjct: 354 TIYRATDLYVKGKDVTYLASMCKLKAG-------RLLREVTDACLQYWGGMGYMEGE-IS 405

Query: 432 RHYRESPANSILLGSGNAMV 451
           R +R+S   SI  G+   M+
Sbjct: 406 RAFRDSRLVSIGGGADEVML 425


>gi|78060671|ref|YP_367246.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965221|gb|ABB06602.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 607

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 49/302 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           L+E + G+ +A I ++     DG Y L G+K ++S    +       ++LA++    G  
Sbjct: 165 LSEPQAGSSLADIRTRAVPGVDGRYRLFGNKMWISGGDHEIAENIVHLVLAKIPDENGQL 224

Query: 255 --------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---------- 291
                    F VPR L D     G  N +    + +K+G R      L F          
Sbjct: 225 PPGIQGISLFTVPRKLIDANGLPGERNDVVLAGINHKMGYRGTVNCLLNFGEGRFRPDGE 284

Query: 292 SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL--AEAIHYARRRHVS 345
           +   G ++G+    L      + + +I + L +A +  +G   +L  A+     R R   
Sbjct: 285 AGAIGEIVGEPGKGLAYMFHMMNEARISVGLGAAAIGYTGYLHALDYAKTRLQGRTRGER 344

Query: 346 GGILIDQPVMKRA------IADIALDIAAATALSF---RLAN---SFDEAKSRSEEAAYA 393
                  P+++ A      +A  A  ++ A AL     RL++   S +   +R E     
Sbjct: 345 SPAAPQAPIIRHADVRRMLLAQKAY-VSGALALCLYAARLSDDVHSLEGTHTREEAQCLL 403

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K W  +        A++  GG GY  E ++ + YR++  N I  G+     LD
Sbjct: 404 DLLTPVVKSWSSQWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALD 463

Query: 454 VL 455
           +L
Sbjct: 464 LL 465


>gi|302518913|ref|ZP_07271255.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
 gi|302427808|gb|EFK99623.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
          Length = 395

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 16/224 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T  AIG  GLTE   G+D   + ++ ++  D  + L G K W  +
Sbjct: 118 FGSEEQKREWLPRMATGEAIGCFGLTEPDHGSDPGGMRTRARRAGDD-WVLDGRKMWITN 176

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             ++   ++ A+ E  V  F+VP         G     +K+K   R++ T EL       
Sbjct: 177 GSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPIKHKGSLRASVTSELLLDGVRL 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILID 351
               +L ++    GP+  +    Y    I+  ++   R     A+ YA+ R   G  L  
Sbjct: 232 PADAVLPEVTGLRGPLSCLNEARY---GILWGALGAARSCFRTALSYAKEREQFGKPLAG 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             + +  +AD+A+++   T L+  L    D    R E+ +  ++
Sbjct: 289 FQLTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQVSLGKL 332


>gi|259480354|tpe|CBF71407.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_7G06510) [Aspergillus nidulans FGSC A4]
          Length = 427

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 29/257 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+TE   G +  A+ ++ +  S G  Y ++G K W   + ++   I+LA+ + R     
Sbjct: 149 FGVTEPNTGLETLALQTRAELNSTGTHYSITGQKIWITCAQVARKMILLARTKPREEVSK 208

Query: 258 VPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
             + L       D +  GL  +++K K+G R+    E+ F         L+G  N     
Sbjct: 209 PTQGLSMFCIDIDKNEPGLELKKIK-KMGGRAVDANEVFFDKYQVPASTLIGREN----- 262

Query: 309 VEDMKILIY-LDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  +++++ +++    ++G       V+L  A  YA  RHV G  +     +   +AD+
Sbjct: 263 -EGFRMILHGMNAERCLLAGEALGLGYVALERAAEYANTRHVFGRAIGKNQAIAHPLADV 321

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEAMECI 419
            + + AA   ++  A  +D   SR++E+  A    + A   KY   + A      A+   
Sbjct: 322 YMKLEAAKLATYHAARLYD--ASRTDESIPAHSVGVAANSAKYLAAEAAFTACERAVLTH 379

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY  E  + R  RE
Sbjct: 380 GGMGYAMEYDVERWLRE 396


>gi|154253125|ref|YP_001413949.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157075|gb|ABS64292.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 389

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 40/277 (14%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSS 237
           + E    N  P+ K       G+TE   G +  AI+++ +   DG  Y + G K W  ++
Sbjct: 104 TEEQKQKNLPPLIKGEDRCCFGVTEPDAGLNTTAISTKAE--WDGKAYVVHGRKMWTSTA 161

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKNKIGNR---SNATV--- 287
             ++  ++LA+   +  C      L     N    G    R   K+G +   SNA     
Sbjct: 162 QTANKILLLARTTPKEKCAKATEGLSLFYTNLDRGGATEVREIEKMGRKAVDSNAVFFDG 221

Query: 288 ------EL--EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 +L  E    F +LL  LN         ++LI  ++    V   R++L +A  YA
Sbjct: 222 LRVPKEDLIGEEGKGFHYLLHGLNPE-------RVLIGAEA----VGVGRIALKKATDYA 270

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V G  +     ++  +A    ++ AA  + F+ A  +D  ++   EA   + +A  
Sbjct: 271 REREVFGRPIGQNQAIQHPLARCWAELEAANLMVFKAAALYDAGENCGAEANAGKYLAAE 330

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +  C+ A       +   GG GY +E  + R+ RE
Sbjct: 331 AGFRACETA-------IMTHGGMGYAKEFHVERYMRE 360


>gi|54023005|ref|YP_117247.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014513|dbj|BAD55883.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 379

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 20/257 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA++++  +  D  Y L+G K F+S +  +D ++M+ +  G  G   +  
Sbjct: 123 LTEPGVGSDAAALSTKAVRDGDD-YILNGAKQFISGAGANDVYVMMVRT-GDDGARGISA 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
           L+      GL     + K+G  +  T         +  +N  G       ++   +   +
Sbjct: 181 LIVPADTPGLSVGPNEKKMGWNAQPTRQVILEDARVPVANRLGAEGDGFRIAMNGLNGGR 240

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  SV G + +L + + Y  +R+  G  L+    ++  +AD+   + AA  L 
Sbjct: 241 LNI----AACSVGGAQAALDKTVPYLAQRNAFGKPLLRNQALQFDLADMRTQLEAARTLL 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A + D       E      +  + K +       V  +A++  GG GY+ E  + + 
Sbjct: 297 WRAAAALDADAPDKVE------LCAMAKRFATDAGFEVANKALQLHGGYGYLAEYGLEKI 350

Query: 434 YRESPANSILLGSGNAM 450
            R+   + IL G+   M
Sbjct: 351 VRDLRVHQILEGTNEIM 367


>gi|16763463|ref|NP_459078.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56412345|ref|YP_149420.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62178637|ref|YP_215054.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161612401|ref|YP_001586366.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167989932|ref|ZP_02571032.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230337|ref|ZP_02655395.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168234822|ref|ZP_02659880.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168243527|ref|ZP_02668459.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168262254|ref|ZP_02684227.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464389|ref|ZP_02698292.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820953|ref|ZP_02832953.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443251|ref|YP_002039302.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450855|ref|YP_002044039.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470181|ref|ZP_03076165.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738236|ref|YP_002113087.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251657|ref|YP_002145055.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197261694|ref|ZP_03161768.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197361282|ref|YP_002140917.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243212|ref|YP_002214027.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388445|ref|ZP_03215057.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927001|ref|ZP_03218203.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205351414|ref|YP_002225215.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207855587|ref|YP_002242238.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224581913|ref|YP_002635711.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911132|ref|ZP_04654969.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|21542012|sp|Q8ZRX2|CAIA_SALTY RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|75505915|sp|Q57TI8|CAIA_SALCH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|81677952|sp|Q5PIN6|CAIA_SALPA RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|189081543|sp|A9MYJ9|CAIA_SALPB RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699670|sp|B5F752|CAIA_SALA4 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699671|sp|B5FHG7|CAIA_SALDC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699672|sp|B5R1R2|CAIA_SALEP RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699673|sp|B5RGA6|CAIA_SALG2 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699674|sp|B4TIH2|CAIA_SALHS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699675|sp|B4T6J8|CAIA_SALNS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699676|sp|B5BL57|CAIA_SALPK RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699677|sp|B4TWR6|CAIA_SALSV RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813526|sp|C0Q4L5|CAIA_SALPC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|16418570|gb|AAL19037.1| putative acyl-CoA dehydrogenase, carnitine metabolism [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56126602|gb|AAV76108.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62126270|gb|AAX63973.1| putative acyl-CoA dehydrogenase, carnitine metabolism [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161361765|gb|ABX65533.1| hypothetical protein SPAB_00090 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401914|gb|ACF62136.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194409159|gb|ACF69378.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456545|gb|EDX45384.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713738|gb|ACF92959.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632678|gb|EDX51132.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197092757|emb|CAR58181.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197215360|gb|ACH52757.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197239949|gb|EDY22569.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197291922|gb|EDY31272.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197937728|gb|ACH75061.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605543|gb|EDZ04088.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323666|gb|EDZ08861.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271195|emb|CAR35983.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205331352|gb|EDZ18116.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334965|gb|EDZ21729.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337402|gb|EDZ24166.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205342470|gb|EDZ29234.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348874|gb|EDZ35505.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707390|emb|CAR31663.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224466440|gb|ACN44270.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261245306|emb|CBG23092.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267991739|gb|ACY86624.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156703|emb|CBW16175.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312911043|dbj|BAJ35017.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320084311|emb|CBY94104.1| probable carnitine operon oxidoreductase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222358|gb|EFX47430.1| Crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615895|gb|EFY12812.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620680|gb|EFY17540.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623969|gb|EFY20806.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627417|gb|EFY24208.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630724|gb|EFY27488.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638056|gb|EFY34757.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640540|gb|EFY37191.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647680|gb|EFY44165.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322656936|gb|EFY53222.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657353|gb|EFY53625.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663673|gb|EFY59873.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666506|gb|EFY62684.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672335|gb|EFY68447.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676353|gb|EFY72424.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679554|gb|EFY75599.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686117|gb|EFY82101.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713089|gb|EFZ04660.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323128390|gb|ADX15820.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323194961|gb|EFZ80147.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200130|gb|EFZ85217.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201049|gb|EFZ86118.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209446|gb|EFZ94379.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212302|gb|EFZ97126.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216607|gb|EGA01333.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219349|gb|EGA03835.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225765|gb|EGA09985.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228694|gb|EGA12823.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236692|gb|EGA20768.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239807|gb|EGA23854.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242145|gb|EGA26174.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249430|gb|EGA33346.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252235|gb|EGA36086.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256674|gb|EGA40404.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261292|gb|EGA44879.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265528|gb|EGA49024.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271684|gb|EGA55102.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326621772|gb|EGE28117.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326626436|gb|EGE32779.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332987025|gb|AEF06008.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|167550749|ref|ZP_02344506.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205324304|gb|EDZ12143.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 293 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|114761136|ref|ZP_01441051.1| putative acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114545384|gb|EAU48386.1| putative acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 379

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 22/258 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
           I L LTE + G+D  AI ++ ++  DG     G  W   +  +D  +  A+ +       
Sbjct: 121 IALALTEPQAGSDAGAIRTRAERSGDGWVLTGGKTWISDAGGADYLLTAARTDPDSRGSR 180

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FLVPR        G+   ++  K+GN    + E+            +         
Sbjct: 181 GVSMFLVPR-----DAPGIAMTQIP-KVGNNCMPSWEIGLDGVQVGAEALMGEEGKGFSG 234

Query: 312 MKILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   ++   A M+ + +   + +L   I +A+ R   G  +     ++  IAD+ + + A
Sbjct: 235 LMSTLHYSRASMAATVLGCAQAALDLTIAHAKERKQFGRPIGSFQTIRHRIADMQMRVDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              +   LA    E +  S  A+ A++ A      C +    V    M+ +  +GY  E 
Sbjct: 295 TRLVVRHLAWMIAEGRDSSRFASQAKVQATE----CLQF---VTDHGMQILASAGYARES 347

Query: 429 SIARHYRESPANSILLGS 446
           ++ R++R++   S   GS
Sbjct: 348 AMQRYWRDARLYSFGEGS 365


>gi|332853286|ref|XP_003316193.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Pan
           troglodytes]
          Length = 428

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 348

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 349 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 401

Query: 432 RH 433
           RH
Sbjct: 402 RH 403


>gi|282862724|ref|ZP_06271785.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282562410|gb|EFB67951.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 379

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 27/260 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252
           + + ++E   G+D+ A+  Q ++ +DG + + G K ++S+     +++L    G      
Sbjct: 122 LSIAMSEPGAGSDVGALRCQARREADGTWVIDGQKTWISNAHCAKYVLLVARTGEDKHGG 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F +P      +  G+  +R+    G   N     +       ++G   V  G  + M
Sbjct: 182 LTMFHLP-----AATAGVETRRIDTMGGREVNDVFLTDVRLPADAVVG--QVDHGWRQLM 234

Query: 313 KIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             L    ++L + ++ ++  R +  +A+ Y R R   G  +     ++  IAD+A +I  
Sbjct: 235 AGLDHERLFLAANMLGLA--RRAFDDAVGYVREREQFGRPVGSFQALRHRIADLATEIEC 292

Query: 369 ATALSFRLANSFDEAKSRS--EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              L   +A   D    +    EA+ A++ A        ++A     E M+ +GG GY  
Sbjct: 293 TRLLVREVALDCDAQPDKPFPREASMAKLKAT-------EIAKRAALEGMQMMGGYGYTT 345

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + RH R +  +++  G+
Sbjct: 346 EFDMERHLRAAVISTVYGGT 365


>gi|308806680|ref|XP_003080651.1| Medium-chain acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
 gi|116059112|emb|CAL54819.1| Medium-chain acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
          Length = 1048

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 117/292 (40%), Gaps = 41/292 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +++   G+D+AAI     K  DG  Y ++G  KW  +    D F    +  G    
Sbjct: 256 ICLAISDPFAGSDVAAIQCTATKTPDGKHYIVNGVKKWITNGTFCDYFTTAVRTGGNGFN 315

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
            L   L+E G   G+    +K         T     + T   +  ++ V   PVE++   
Sbjct: 316 ALSLLLIERG--EGVETNPIK---------TAYSPAAGTSYIIFENVKV---PVENLLGR 361

Query: 313 -----KILI--YLDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                K+++  +     M V+G    MR  L E   +A +R   G  LIDQPV++  +A 
Sbjct: 362 EGDGFKLIMHNFNHERWMIVAGTNGAMRNVLKECYTFAHQRKTFGKRLIDQPVIRNKLAR 421

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + A    +  +     +     +  A A  +A + K+ C ++A     E  +  GG
Sbjct: 422 MTSQLEAVECWTESITYQMGKLTHAQQAVALAGPIA-LLKFLCTRVANFFADEGAQIFGG 480

Query: 422 SGYIEE---RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
            G       R I    R +  ++IL GS   M        + GT LF +L S
Sbjct: 481 RGITRTGMGRVIEGFNRAAKFSAILGGSEEVMA-------DLGTILFTRLAS 525


>gi|114675643|ref|XP_001170229.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 4 [Pan
           troglodytes]
          Length = 417

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 156 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 213 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 268

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 269 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 327

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 328 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 380

Query: 432 RH 433
           RH
Sbjct: 381 RH 382


>gi|242238846|ref|YP_002987027.1| acyl-CoA dehydrogenase [Dickeya dadantii Ech703]
 gi|242130903|gb|ACS85205.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 381

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 38/272 (13%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEGR 252
           A  L  TE + G+D   I +   + +  +Y L+G K F++      ++++     + E  
Sbjct: 118 AYSLAFTEPQAGSDNNRIATTYTRKNGKVY-LNGQKTFITGAKDLPYMLVLARNPEPEDP 176

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNT------------FGFLL 299
             CF +  L     PN    +R   +K+G    +  E+   N             +GF+ 
Sbjct: 177 KRCFTLWWL----DPNSPGVKRNDLHKVGWHMISNCEVFLDNVEVSEEDRVGREGWGFIH 232

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
              N       D++ L+    A  S+     +  +A  YA +R      +    + +  +
Sbjct: 233 MMENF------DIERLVI---AAHSLGVAECAFEDAARYANQRVQFDKTIGQFQLTQLKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +A+ I       +R+A   D+           R  AP+ K +C + A  V+ +AM+ +
Sbjct: 284 TQMAIKIQNMKNFVYRVAWECDQGLP-------MRQSAPMCKLYCAQSACEVVDDAMQIL 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG GY  +  I+R +R+   N I  G+   MV
Sbjct: 337 GGLGYTNDSRISRFWRDVRVNRIGGGTDEIMV 368


>gi|256377373|ref|YP_003101033.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255921676|gb|ACU37187.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 395

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 18/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G +E   G+D++A+T+      DG   ++G K W  ++  +D  ++     G     +V
Sbjct: 112 VGFSEPGAGSDLSAMTTTITDTGDGEVVVTGRKSWITAAHYADLLVVFGHYRGGASAVVV 171

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PVEDMKIL 315
           P         G+  +R+ N  G R+     +           D+   TG   P+     L
Sbjct: 172 P-----ADAPGVRVERVPNPSGCRAAGHSGITLDGVR-VPAADVLGGTGLPLPLVVTAAL 225

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  +  A   V  +R  LA A+ +   R   GG+L D  ++ R +A++ +    A   S
Sbjct: 226 TYGRVSVAWGCVGILRACLAAAVEHTTTREQGGGVLADHQLVARHLAELHVGEQVAARAS 285

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              +  +D   + S + A A + A   KY   + A A    A++ +G +G  +   +AR 
Sbjct: 286 EHASALWD---ANSPDLAVAAVQA---KYLASREAAAGSGRAVQLLGSAGASDGHVVARA 339

Query: 434 YRESPANSILLGS 446
           +R++    I+ G+
Sbjct: 340 HRDAKLMEIIEGT 352


>gi|149912203|ref|ZP_01900784.1| isovaleryl-CoA dehydrogenase [Moritella sp. PE36]
 gi|149804726|gb|EDM64775.1| isovaleryl-CoA dehydrogenase [Moritella sp. PE36]
          Length = 390

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 116/258 (44%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+  ++ +   + DG  Y L+G+K W  + P +  +I+ A+    +    
Sbjct: 130 LAMTESNAGSDV--VSMKLSAVLDGDDYILNGNKMWITNGPEASTYIVYAKTAPELNSHG 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G    +  +K+G R + T EL F +       +LG LN        +++
Sbjct: 188 ITAFIVERGLAGFSQAQKLDKLGMRGSNTCELVFQHCRVPKTNILGTLN------HGVQV 241

Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L+  LD   + ++G  + + +A     + Y  +R   G  + +  +++  IAD+   + A
Sbjct: 242 LMSGLDYERLVLTGGPLGIMDACMDLVVPYIHQRKQFGKAIGEFQLVQAKIADMYSQMNA 301

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A   ++ +A + D   +  ++ A   +       +  ++A  +  + ++ +GG+GY  E 
Sbjct: 302 AKCYTYTVARACDNGDASRKDCAGVIL-------YSAELATKMALDTIQLLGGNGYSNEY 354

Query: 429 SIARHYRESPANSILLGS 446
              R  R++    I  G+
Sbjct: 355 PAGRLLRDAKLYEIGAGT 372


>gi|116197717|ref|XP_001224670.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178293|gb|EAQ85761.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 516

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 40/269 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A + +   K  DG  Y ++G  KW  +   SD F+        +  
Sbjct: 247 ICLAITEAFAGSDVAGLRTTATKTPDGKHYIVNGTKKWITNGVFSDYFVTGVNTGKGLSV 306

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
            L+ R        G+  + +K    + +  T  + F N       LLG+        E+ 
Sbjct: 307 LLIER------GEGVETKPIKTSY-SPAAGTTYITFDNVKVPATNLLGE--------ENK 351

Query: 313 KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD-IA 363
            I + L +        A  ++  MR+ + E++ +A +R V    LIDQPV+++ +A  IA
Sbjct: 352 GIYVILSNFNHERWTMACATIRYMRLVVEESLKWAHQRLVFKKRLIDQPVIRQKLAKMIA 411

Query: 364 LDIAAAT---ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           L  +  +    +++++ N      + SE+A +      + K    + A  +  EA++  G
Sbjct: 412 LCESHQSWLETITYQMCNM-----AYSEQAKHLGGPIALLKMSATRAAHEIADEAVQIWG 466

Query: 421 GSGYIEE---RSIARHYRESPANSILLGS 446
           G G  +    R I    R    +SIL G+
Sbjct: 467 GRGLTQTGMGRVIENFNRTYKFDSILGGA 495


>gi|300934638|ref|ZP_07149894.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 403

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE + G+D AA+ +   K+    Y L+G K F+++       ++ A V+   G    
Sbjct: 133 MAITEPQFGSDSAAVAATA-KLDGDEYVLNGEKIFVTAGERCTHVVVWASVDKSAGRAAI 191

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR     +P G    RL++K+G RS+ T      N     +   N+   P  D K
Sbjct: 192 KSFVVPR----DTP-GFELVRLEHKLGIRSSDTAHFILDNV---RIPKENLLGSPEVDTK 243

Query: 314 -----ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPVMKRAIA----- 360
                ++   D+    V+GM V +A A +   R    + G+ ID  +P   ++ A     
Sbjct: 244 KGFGGVMATFDNTRPLVAGMAVGVARAALEKLREVLTNAGVEIDYDKPAWAQSAAASEYI 303

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  L+ R     D     S+EA+ ++  A        +MA  +   A+E  G
Sbjct: 304 RLESDWEAAYLLTLRATWMADNKIPNSKEASESKAKA-------GRMATDLTLRAVEMAG 356

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R+S    I  G+
Sbjct: 357 AYGYSERDLLEKWARDSKILDIFEGT 382


>gi|294628120|ref|ZP_06706680.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831453|gb|EFF89802.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 408

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YAR R   G  +ID   +   +AD+A  + AA  + +R +     
Sbjct: 273 MAVGTARAAYEVALDYARTREQFGRPIIDNQGVAFQLADMATSVDAARLMVWRASWMAIN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKKVTAQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|148703115|gb|EDL35062.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b [Mus
           musculus]
          Length = 553

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 111 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 170

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 171 DKMTAFIVER-----DFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 225

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 226 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 280

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 281 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 333

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448
           GSGY+++    R  R+  A  +L+  GN
Sbjct: 334 GSGYMKDYPYERMLRD--ARILLIFEGN 359


>gi|83646189|ref|YP_434624.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83634232|gb|ABC30199.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 383

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 135/343 (39%), Gaps = 45/343 (13%)

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHL-----------MSPSVTSASMVALMTTP----RVH 171
           VV+K AH      L  +A+ E+G L           M+    S S+  L+       +  
Sbjct: 42  VVKKLAHN---GWLGGLAKEESGGLGFDATTFGLLNMAIGAGSGSLTGLLNVHSMVLKTI 98

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           +DW      ++Y      P+ K  +      TE   G D   +++Q     D +      
Sbjct: 99  EDWGTPEQKQQY----LTPLVKGEIIGAFAQTEVGAGGDSKNLSTQFVDDGDALLVNGQK 154

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W   + ++D F++  + +G     L+P+        G      KN +G +S     L+F
Sbjct: 155 TWITFAQIADLFLVFGKYQGLDTAVLIPK-----ETPGFTITAKKNMLGFKSAYLAVLDF 209

Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
            +       ++G        + +      LD   +SV+   + + +     +   A  R 
Sbjct: 210 VDVRIPKSHIIGKPGFGQNLISNSA----LDYGRISVAWAALGVQQAALAASARRANTRS 265

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L DQ +++  +A+++  + A+  +      S  +AK   +E A  +I+    K +
Sbjct: 266 TFGALLADQGIIRGYLAEMSSSLLASQLICL----SATKAKESRDEDALEQILQ--AKLF 319

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    A+A++  GG G  E   ++R YR++    ++ GS
Sbjct: 320 ASHEAGTAAAKAVQIHGGHGCDESNGVSRLYRDAKILQVVEGS 362


>gi|262201025|ref|YP_003272233.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084372|gb|ACY20340.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A + ++ ++  D  + L+G K W  +   S  + ++A  +       +  
Sbjct: 132 LSEREAGSDAAGMKTRARRDGDN-WVLNGTKCWITNGGKSSWYTVMAVTDPEKKANGISA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            +      G     L+ K+G + + T EL F +       ++GD    TG    ++ L +
Sbjct: 191 FMVHKDDPGFTVGPLEKKLGIKGSPTAELYFEDCTIPADRIIGDEG--TGFKTALQTLDH 248

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I   +V   + +L +AI Y + R   G  +     ++  IAD+A+ + AA  + + 
Sbjct: 249 TRPTIGAQAVGIAQGALDKAIEYVKDRKQFGQSISKFQGVEFMIADMAMKVEAARLMVYT 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I +  +K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 309 SA-----ARAERGEKNLGFI-SSASKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMR 362

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 363 DAKITQIYEGT 373


>gi|303276074|ref|XP_003057331.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461683|gb|EEH58976.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 474

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 21/267 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGC 255
           I L +TE   G+D++ +    +   D        KW  +   +D F +  +    G +  
Sbjct: 180 ICLCITEPGAGSDVSNLQCTAKDAGDHYVVEGNKKWITNGIYADYFTVAVRTGPPGSMHK 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L   L+E   P G+   ++ + +G   + T  +EF N     +   N+     E  K +
Sbjct: 240 GLSMLLMEKSMP-GITVSKM-DCMGVWPSGTTYIEFDNV---KVPKTNIVGKVNEGFKQV 294

Query: 316 IYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +Y  +      A  +    R  + EA+ +AR R   G  LI+   ++  I ++A      
Sbjct: 295 MYNFNHERWLLAAQAARMARTCVEEALSFARTRRTFGKFLIEHQAIQHKIGEMARQCEGL 354

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A    L N   +  + S+E    ++   I   K    ++A    + AM+ +GG+GY   
Sbjct: 355 QAW---LENVTFQMNTMSKEEQNKKLGGHIALLKLSSSRVAEFCASNAMQVLGGAGYTRT 411

Query: 428 R---SIARHYRESPANSILLGSGNAMV 451
                + R YRE  A +I  GS   M+
Sbjct: 412 GKGVKVERIYREVKAYAIPGGSEEIML 438


>gi|254390326|ref|ZP_05005544.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294811284|ref|ZP_06769927.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326439768|ref|ZP_08214502.1| type I polyketide synthase component [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704031|gb|EDY49843.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294323883|gb|EFG05526.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 631

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 18/244 (7%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQV 249
           ++ V + L LTE+  G+D+ A    G+    G + L+G KW +++    + + +      
Sbjct: 117 RSGVPVSLALTERAHGSDLLAGDVLGEPDGSGGWRLTGEKWLINNATRGSLLSVLTRTHP 176

Query: 250 EGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           EG    F V     R L  G  +  C  ++    G R      + F       G  +G  
Sbjct: 177 EGGPRGFTVLLVDKRTLTQGE-HYRCVPKIPTH-GIRGADISGIAFDGAPVPAGAAVGAE 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 V     L     + +S+     +L  A+ +A RR + G  L++ P  +  +A  
Sbjct: 235 GTGLETVLKALQLTRTMCSSLSLGAADHALRIALDFAERRELYGRRLVELPQARHVLASA 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A D+ A  AL+   A S   A   ++E + A   A +TKY       AVIAE    +G  
Sbjct: 295 AADVLAGEALATVAARSVHTA---TDELSVA---AAVTKYLLPTGTEAVIAELTRLLGAR 348

Query: 423 GYIE 426
            +++
Sbjct: 349 AFLK 352


>gi|311896088|dbj|BAJ28496.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 396

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 135/335 (40%), Gaps = 71/335 (21%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA--ITSQGQ 219
           + L  T    ++W PK+ S E             V    GLTE  GGTD  A   T++  
Sbjct: 99  IHLFGTEEQKREWLPKLTSGE-------------VLGAFGLTEPEGGTDAGATRTTARYD 145

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE------DGSPN----- 268
           + +D  + ++G K F+++  +D            G   V  L E      DGS N     
Sbjct: 146 EATDE-WVINGSKCFITNSGTDI----------TGLVTVTALTEPLTHSSDGSSNHSPTR 194

Query: 269 ------------GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
                       G    +  +K+G  ++ T EL F++       LLG      G  + ++
Sbjct: 195 EISSIIVPTGTAGFQVSKKYSKVGWNASDTRELSFTDCRVPAANLLG--RQGRGYAQFLR 252

Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           I   LD   ++++ +   LA     +++ YA  R   G  +    V++  +AD+    A 
Sbjct: 253 I---LDEGRIAIAALATGLAQGCVDQSVQYAGTRRAFGRPIGANQVIQFKLADMETR-AH 308

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            + L++R      +A SR   A   +  A I K +  + A     EA +  GG G++ E 
Sbjct: 309 ISRLAWR------DAASRLLHAEPFKKEAAIAKLYASEAAVDNAREATQIHGGYGFMNEY 362

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +AR +R+     + +G G + V  +L   E G  
Sbjct: 363 PVARMWRD--CKILEIGEGTSEVQRMLIARELGVT 395


>gi|296169524|ref|ZP_06851144.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895790|gb|EFG75485.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 393

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 47/266 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
            V +  G+TE   G D + IT+  ++  D  Y ++G K ++S  M SD  ++L + +   
Sbjct: 124 EVHVCFGVTEPGAGLDTSRITTFAKRDGD-RYIVNGRKVWISKAMESDKILLLTRTQSYD 182

Query: 252 -------------------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEF 291
                              RV    + ++  +  S N L    L+  + +R       + 
Sbjct: 183 EVTKKTDGMTLFITDLDRSRVDVRPIRKMGRNAVSSNELFIDNLEVPVEDRIG-----QE 237

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F ++L  LN         ++LI    A  ++   RV+L +A+ Y   R V G  +  
Sbjct: 238 GKGFQYILDGLNPE-------RMLI----AAEALGIGRVALDKAVKYGNEREVFGRPIGM 286

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD    + AA  +  +    +D  K    EA  A       KY C     A 
Sbjct: 287 NQGLQFPLADSLARLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADAGFAA 339

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
              A++  GG GY EE  I R++RE+
Sbjct: 340 ADRALQTHGGMGYAEEYHITRYFREA 365


>gi|240171581|ref|ZP_04750240.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium kansasii ATCC 12478]
          Length = 388

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 29/262 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVG-- 254
           G GLTE   G+D A  T    +I    + ++G K F+++  +D  + + +  V G V   
Sbjct: 127 GFGLTEPGAGSD-AGSTRTTARIEGDEWIINGSKQFITNSGTDITSLVTVTAVTGSVADG 185

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
                  +VP     G+P G   + + NK+G  ++ T  L F++       LLG     T
Sbjct: 186 KKEISTIIVP----SGTP-GFVVEPVYNKVGWNASDTHPLTFTDARVPAENLLGARG--T 238

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    + IL    +  A ++    +  + E++ YA+ R   G     QP+   +   I+ 
Sbjct: 239 GYANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFG-----QPI--GSYQAISF 291

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IA   A +     ++ EA ++       +  A I K    + A     +A +  GG G+
Sbjct: 292 KIARMEARAHVARTAYYEAAAKMLAGKPFKKEAAIAKMVSSEAAMDNARDATQIHGGYGF 351

Query: 425 IEERSIARHYRESPANSILLGS 446
           + E  +ARHYR+S    I  G+
Sbjct: 352 MNEYPVARHYRDSKVLEIGEGT 373


>gi|116669926|ref|YP_830859.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
           FB24]
 gi|116610035|gb|ABK02759.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
          Length = 396

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 19/246 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCF 256
            GLTE  GG+D+A  T    +     + L+G K W  ++  SD  ++ A  + + +V  F
Sbjct: 138 FGLTEPLGGSDVAGGTRTTARRKGDSWILNGAKRWIGNATFSDWVVIYARDEADNQVKGF 197

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           LV     D    G    +++NKI  R+    ++   N      F L + N      + +K
Sbjct: 198 LV-----DTKTEGYSATKIENKISLRTVQNADITLDNVVVPDFFKLANANSFRDTNKVLK 252

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +   L  A  +V     +   A  YA  R   G  +    +++  +  I  +  ++  + 
Sbjct: 253 V-TRLAVAWQAVGQQLAAFDVARRYAVERSQFGRPIASFQLVQNQLVQILGNAVSSMGMM 311

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL+   D  +++ E++A A+       +   +M  +V A     +GG+G + +  +A+ 
Sbjct: 312 VRLSQLEDAGEAKDEQSALAK------AFTTARMRESV-AIGRSLLGGNGIVTDFEMAKI 364

Query: 434 YRESPA 439
           + ++ A
Sbjct: 365 FSDAEA 370


>gi|170781079|ref|YP_001709411.1| putative acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155647|emb|CAQ00765.1| putative acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 392

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQK 220
           VA+  +P    +W P+  S E             +    GLTE   G+D A  + +   +
Sbjct: 109 VAVAGSPEQRAEWLPRFASGE-------------ILGSFGLTEPLSGSDSARGLRTIATR 155

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D        +W  +  +SD  ++ A+   +G+V  FLVP    + SP G    R+++K
Sbjct: 156 RGDEWSITGSKRWIGNGTVSDVTVIWAKDADDGQVKGFLVP----NDSP-GFRATRIEDK 210

Query: 279 IGNR--SNATVELEFSNTFGFLLGDLN-VSTGP-VEDMKILIYLDSAIMSVSGMRVSLAE 334
              R   NA +EL+     G ++ D N +  G    D   ++ L  A ++ + + +S+  
Sbjct: 211 QALRIVQNADIELD-----GVIVPDANRLQNGTSFADTAAVLRLTRAEVAWAAIGISIGA 265

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ Y   R   G  L    +++  +     +I A+  L  R +   DE     E +A
Sbjct: 266 YEAAVAYTGERVQFGKPLGAHQLIQDLLVRSLGNITASIGLVTRASEMVDEGTQSDEHSA 325

Query: 392 YARIMAPI----TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            A+  A      T  WC            E  GG+G + +  +AR + ++ A
Sbjct: 326 LAKAYATSRMRETVAWC-----------REAFGGNGIVLDYDVARFFADAEA 366


>gi|145521718|ref|XP_001446709.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414197|emb|CAK79312.1| unnamed protein product [Paramecium tetraurelia]
          Length = 385

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 42/270 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D   + +  +K  +  Y ++G K F+S   +SD ++++ +  E  V C LV 
Sbjct: 146 LTEPNSGSDSKNMKTFAKKDGND-YVINGSKCFISGGSVSDVYLVMCKTSEKDVSCILV- 203

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312
              E G+P GL + +L++K+G  ++ T  + F       SN  G       ++   ++  
Sbjct: 204 ---EKGTP-GLSFGKLEDKMGWNASPTAMVLFDNVRVPQSNLLGKEGNGFKMAMSALDGG 259

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +I I    A  S+ G   +      Y   R   G     QP            +AA   L
Sbjct: 260 RINI----ASCSLGGASFAFDLTKDYLHDRKQFG-----QP------------LAAFQGL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA--VIAEAMECIGGSGYIEERSI 430
            F+ A   D A +        R  A +     C       +  EA++  GG GY+ E  I
Sbjct: 299 QFKFA---DMATNLVTSRLIVRQAAQMIDNKICYQNSCFNIANEALQLHGGYGYLSEYQI 355

Query: 431 ARHYRESPANSILLGSGNAM-VLDVLNLLE 459
            R  R+   + IL G+   M V+   NLL+
Sbjct: 356 ERIVRDLRVHQILEGTNEIMKVIISRNLLK 385


>gi|90075402|dbj|BAE87381.1| unnamed protein product [Macaca fascicularis]
          Length = 430

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 8/90 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D +++ ++ +   S+  Y L+G K W  +SPM+D F++ A+ E GR+  F
Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGRIRGF 236

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
               LLE G   GL   R++ K   R++AT
Sbjct: 237 ----LLEKGM-RGLSAPRIQGKFSLRASAT 261


>gi|118085838|ref|XP_418663.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 410

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 28/272 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EG----RVG 254
           LG++E   G+D+A+I +   +  D      G  W  S   +D   +LA   EG       
Sbjct: 150 LGISEAGAGSDVASIKTTAVRKGDEYVINGGKMWTTSGCQADWMCLLANTSEGHPHQNKS 209

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
              +P  L      G+   +  +K+G RS+ T ++ F +       L+G+  +       
Sbjct: 210 LICLPMNLP-----GIHITKKIDKLGMRSSDTAQIFFEDVRVPSKNLIGEEGMGF----T 260

Query: 312 MKILIYLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++L + +  +  V+ +   L     E I Y R+R      ++   V+   +A++A ++ 
Sbjct: 261 YQMLQFQEERLWGVATVLTPLETIIQETIDYTRQRKAFDQSVLQNQVVHFRLAELATEVE 320

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              +L +R    + E    ++ A+ A++ A        ++A  V    ++  GG G+  E
Sbjct: 321 LLRSLLYRTIALYVEGNDVTKFASMAKLKAG-------RLAREVTDSCLQFWGGMGFTSE 373

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             ++R YR+    SI  G+   M+  +   +E
Sbjct: 374 VLVSRFYRDLRLVSIGGGTDETMLSIICKYME 405


>gi|302342724|ref|YP_003807253.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639337|gb|ADK84659.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 382

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 28/273 (10%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
           GLTE   G+D AA+ +    + DG  + L+G K F+++    ++ ++A +  +      +
Sbjct: 124 GLTEAGAGSDPAAMRTTA--VLDGNEWVLNGEKKFITNGNVASYAVVAAITDKAAGAKGI 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V   LE+    G     ++ K+G  ++ T EL F +    +  +  +        +
Sbjct: 182 SSFVVD--LEN--TKGFSVGFIEEKMGICASGTSELVFEDAR--IPKENLLGQLGGGLKQ 235

Query: 314 ILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +L+ L+S  + +        R  L EA+ YA+ R   G  +     ++  +ADIA  + A
Sbjct: 236 MLMTLNSGRIGIGSQALGIGRAVLEEAVAYAKEREQFGKPIAAMQAIQWKLADIATHLDA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  R A   D+        A   + A + K +    A A   E ++ +GG GY +E 
Sbjct: 296 AELLLLRAAWLEDQH-------ANFEMQAAMGKMYASDAAMAAAIEGVQVLGGYGYCKEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL-NLLEK 460
           ++ RH R++    I  G+   M L +  NLL++
Sbjct: 349 AMERHMRDAKITQIYEGTNEIMRLVIARNLLKQ 381


>gi|162451125|ref|YP_001613492.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161161707|emb|CAN93012.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 379

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/249 (18%), Positives = 106/249 (42%), Gaps = 14/249 (5%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +E   G+D+A + ++  K  D  Y L+G K W  ++  +  +++ A     +    +   
Sbjct: 126 SEPDAGSDVAGLKTRFTKHGDD-YVLNGQKCWITNASYARYYVIFATSNPELRHKGIAAF 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---- 317
           + D    GL   + ++K+G R++ T ++ F +       +L    G    + +  +    
Sbjct: 185 IVDRDTPGLRVGKKEDKLGQRASDTAQV-FLDDVKVPKANLLAPEGQGFKLAMETFNQTR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D    +   MR  + E + YA+ R   G  + +  +++  +A++A+ +     L  + A
Sbjct: 244 PDIGAAATGLMRRCVDECVAYAKERKTFGQPIGNHQLIQWMLAEMAIRVEGTRLLYQKAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D             I++   K +    A     +A++  GG+GY++E  + +  R++
Sbjct: 304 WNLDHGVRDP-------IVSSFAKAYGADSAMQTAVDAVQVFGGNGYVKEYPVEKMMRDA 356

Query: 438 PANSILLGS 446
               I  G+
Sbjct: 357 KVLQIYEGT 365


>gi|294632960|ref|ZP_06711519.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830741|gb|EFF89091.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 60/285 (21%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
            REY P     + +  + +  G+TE   G D + I ++ +KI DG + ++G K W  ++ 
Sbjct: 108 KREYLPK----LARGEILMAFGVTEPTAGVDTSRIRTRAEKI-DGGWVVNGQKVWITNAQ 162

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSP--------NGLCYQRLK----NKIGNRSNAT 286
            +   ++LA+   R          ++  P          L  +R+     +K+G  +  +
Sbjct: 163 NAHKILLLARTSPR----------DENKPLDGMTLFFTDLNRERITVREIDKLGRAAIDS 212

Query: 287 VEL--------------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            EL              E    F +L+  LN         +I++ ++   +     R +L
Sbjct: 213 NELFIDNLEVRDDEVVGEVGQGFRYLIDGLNPE-------RIVVGMEGIGLG----RCAL 261

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  YA  R V    +     +   +AD  + + AA  +    A  FD  ++  +EAA 
Sbjct: 262 ELASKYANERVVFNRPIGKNQAVAHPLADSWIRLEAAELVCLNAARLFDAEQNCGKEAAA 321

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           A+ +   + +  C         AM+  GG  Y +E  + R +RE+
Sbjct: 322 AKFLGAESGFQACD-------RAMQTHGGFAYAKEYHVERLWREA 359


>gi|301105665|ref|XP_002901916.1| glutaryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
 gi|262099254|gb|EEY57306.1| glutaryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
          Length = 420

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 40/260 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D  ++ ++ +   D  Y L+G K W  ++P++D F++ A
Sbjct: 148 PRLATGELIGCFGLTEPNHGSDPGSMETRARLKGDK-YILNGSKNWITNAPIADVFLVWA 206

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +  EG +  F    +LE   P GL    ++ K          L  S T    L D+ V  
Sbjct: 207 KDDEGDIRGF----ILEKDFP-GLSAPYIEGK--------ATLLASATGMIFLEDVEV-- 251

Query: 307 GPVEDM--KI------LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            P E+M  K+         L+SA   +S   +  A A       Y   R+  G  L    
Sbjct: 252 -PKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYACMDIARQYTLDRNQFGAPLAANQ 310

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +IA       ++    DE K+  E       +  + K   C  A  +  
Sbjct: 311 LIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVE-------LISMVKRNSCGKAIEIAR 363

Query: 414 EAMECIGGSGYIEERSIARH 433
            A + +GG+G  +E  I RH
Sbjct: 364 NARDMLGGNGVSDEYHIIRH 383


>gi|149048723|gb|EDM01264.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_d
           [Rattus norvegicus]
          Length = 566

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIK 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|11498775|ref|NP_070004.1| acyl-CoA dehydrogenase, short chain-specific (acdS) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649411|gb|AAB90069.1| acyl-CoA dehydrogenase, short chain-specific (acdS) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 437

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 51/297 (17%)

Query: 201 GLTEKRGGTD----------IAAITSQGQKIS--DGI-YCLSGHK--WFLSSPMSDAFIM 245
           G+TE   G+D          + A   +G  ++  DG  + +SG K  W  S+P++    +
Sbjct: 142 GVTEPEHGSDYLITLREEPELVAKFGKGNVVAEKDGDEWVISGQKSAWVSSAPVATHCGL 201

Query: 246 LAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            AQ++G      G F +  L  DG   G    R  + +G R +   EL F    G  + +
Sbjct: 202 HAQLKGSRSIAEGLFCIVPLDADGVKKG----RPADMLGMRDDPQGELFFD---GVRIPE 254

Query: 302 LNVSTGP-------VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             V   P        + +  L        +V   R    EA+HYAR+R V GG+    P+
Sbjct: 255 HYVVVAPGFFYGVFFDQLLCLTSCGMGAFAVGLARACFEEALHYARQR-VQGGV----PI 309

Query: 355 MKRAIADIAL----DIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAP 409
           +K     + L    +         R A  +   K   ++ A A    A   + +  K+A 
Sbjct: 310 VKHKNVKLKLYEMFEKVETARYYVRKATEYTHKKIIEQQTADASPRHARAAQIYAKKIAY 369

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL------DVLNLLEK 460
            V  +A++  G  G I+E  I + +R+  A  +L+  G   VL      DV++  EK
Sbjct: 370 EVAHDALQIFGAYGLIKEFVIEKFFRD--ARCMLIEDGTVEVLSLEAAEDVIDNYEK 424


>gi|326333013|ref|ZP_08199269.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325949207|gb|EGD41291.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 32/253 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-------LAQVEGR 252
             LTE   G+D + + ++  +  D  Y ++G K F+++ +    +M       LA+    
Sbjct: 120 FALTEPEAGSDPSGLRTRAVRAGDA-YVINGQKRFITNAIWADLLMVFARTGDLAEGAKN 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F+VP      +P G+      +K+G R + T E+      G  +   N+  G VE  
Sbjct: 179 ISVFVVP----TDTP-GVTIGPRDHKMGQRGSVTSEIFLD---GVRVPAENL-VGEVEGE 229

Query: 313 KI---LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                +  L    + ++ + V LA     E++ +A      G  L +  +++  +A+   
Sbjct: 230 GFSAAMRSLAKGRLHIAALTVGLADRLIEESLRHATTNSQGGQKLAEFQLIQAMLAESRT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A  A+    A S+D+   R       R    + K +C +    +   A++  GG GY
Sbjct: 290 EAYAGRAMVLEAARSWDDGSDR-------RTAPSLCKLFCTEAVDRIADRAVQIHGGLGY 342

Query: 425 IEERSIARHYRES 437
           + E  + R YR++
Sbjct: 343 MREVPVERFYRDA 355


>gi|262204027|ref|YP_003275235.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087374|gb|ACY23342.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 390

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 40/260 (15%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250
           V     LTE   G++ A + ++  +  D  + ++G K F++ +P++D F++ A+      
Sbjct: 124 VVASFALTEPGAGSNPAGLRTKAVRDGDD-WVINGDKRFITNAPVADLFVVFARTRPADE 182

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305
               +  FLVP         GL       K+G     T ++ F+        D+ V    
Sbjct: 183 SGTGIAVFLVP-----ADTPGLEVGAKDRKMGQEGAWTADVSFN--------DVRVPASA 229

Query: 306 -TGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             G  ED      + S        A ++V   + +L E++ YA      G  + +  +++
Sbjct: 230 LVGGDEDAGYRAAMTSLARGRIHIAALAVGTAQRALDESVAYAATATQGGTPIGNFQLVQ 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD    + A  AL    A  +   + R       RI     K +C +M   V   A+
Sbjct: 290 AMIADQQTGVMAGRALVRDAARKYVNGEDR-------RIAPSAAKLFCTEMVGNVADLAV 342

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GG+GY+   ++ R YR+
Sbjct: 343 QIHGGTGYMHGVAVERIYRD 362


>gi|120434680|ref|YP_860369.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117576830|emb|CAL65299.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 454

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 113/285 (39%), Gaps = 52/285 (18%)

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W PK             MQK       GLTE   G+ +A       K     + L+G
Sbjct: 179 KQEWLPK-------------MQKMEKIGAFGLTEPNVGSGVAGGLETTCKFDGENWVLNG 225

Query: 231 HK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNA 285
            K W  ++  +D  I+ A+     +V  FLV +        G   +++K K+  R   NA
Sbjct: 226 QKKWIGNATFADVTIIWARDLDSNQVKGFLVRK-----ENPGFKAEKIKGKMALRIVQNA 280

Query: 286 TV-----------ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +            L+ +N+F      L ++   V           A  +V   R +   
Sbjct: 281 LITLKDCKIPESDRLQNANSFKDTANVLRMTRAGV-----------AWQAVGCARGAYES 329

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ Y ++R   G  +    +++  + ++  ++ A   + FRL+   D+     E A+ A+
Sbjct: 330 ALKYTKKREQFGRPIASFQLIQNHLVEMLSNLTAMQTMVFRLSEMQDQDLLTDEHASLAK 389

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +       +C      V++ A E +GG+G + +  +AR   ++ A
Sbjct: 390 V-------YCSMRMRDVVSRAREVLGGNGILLDYDVARFVADAEA 427


>gi|327401705|ref|YP_004342544.1| Isovaleryl-CoA dehydrogenase [Archaeoglobus veneficus SNP6]
 gi|327317213|gb|AEA47829.1| Isovaleryl-CoA dehydrogenase [Archaeoglobus veneficus SNP6]
          Length = 350

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 43/262 (16%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRL 261
           TE + G+D+ +I  + +   D  Y L+G+K  +++  +++ F++LA+ +     F+V R 
Sbjct: 111 TEPKAGSDLKSIELEARDEGD-CYVLNGNKTLITNGELAEVFVVLARCDNGFSLFVVER- 168

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED------MKIL 315
                  G+  ++L N  G R +  V + F+        D+ V   P ED        ++
Sbjct: 169 -----GEGMKVRKL-NAGGMRGSGLVSIRFN--------DVEV---PKEDSIPNGLKAVM 211

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ +    S + + +AE     AI YA+ R   G  + +   ++  +A++A DI A  
Sbjct: 212 NTLNVSRPVFSAIGLGIAERCLDLAIKYAKERKAFGKRISEFQGIQWMLAEVAADIEALR 271

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +  A S D  +S             + K    K A      A+E  GG G +   ++
Sbjct: 272 LMVYSTAESCDPVRS------------AMCKLIAAKTAKKAADVAIEIFGGHGTLRGAAV 319

Query: 431 ARHYRESPANSILLGSGNAMVL 452
            R YR++    I  G+   M L
Sbjct: 320 ERAYRDAKILDIGEGTSEIMKL 341


>gi|333027259|ref|ZP_08455323.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332747111|gb|EGJ77552.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 395

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 16/224 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T  AIG  GLTE   G+D   + ++ ++ + G + L G K W  +
Sbjct: 118 FGSEEQKREWLPRMATGEAIGCFGLTEPDHGSDPGGMRTRARR-AGGDWVLDGRKMWITN 176

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             ++   ++ A+ E  V  F+VP         G     +K+K   R++ T EL       
Sbjct: 177 GSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPIKHKGSLRASVTSELLLDGVRL 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILID 351
               +L ++    GP+  +    Y    I+  ++   R     A+ YA+ R   G  L  
Sbjct: 232 PADAVLPEVTGLRGPLSCLNEARY---GILWGALGAARSCFRTALSYAKEREQFGKPLAG 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             + +  +AD+A+++   T L+  L    D    R E+ +  ++
Sbjct: 289 FQLTQAKLADMAVELTNGTLLALHLGRRKDAVGLRPEQVSLGKL 332


>gi|268574352|ref|XP_002642153.1| Hypothetical protein CBG18107 [Caenorhabditis briggsae]
 gi|187025155|emb|CAP35621.1| hypothetical protein CBG_18107 [Caenorhabditis briggsae AF16]
          Length = 409

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + ++E   G+D++AI +  ++    +       W  +   +D   +L             
Sbjct: 145 IAVSEPHAGSDVSAIRTYARRYGTDLIINGSKMWITNGDQADWACVLVNTSNEKNLHKNK 204

Query: 260 RLL--EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
            L+     +P G+      +K+G RS+ TV+L F +      +++G+     G     ++
Sbjct: 205 SLICIPLDTP-GVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGE----EGRGFSYQM 259

Query: 315 LIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + D  +++V+     ++  + E I YAR R + G  L+DQ  ++  +A++  ++ A  
Sbjct: 260 KQFNDERLVTVAVGLLPLQKCINETIEYARERSIFGKTLLDQQYVQFRLAELEAELEATR 319

Query: 371 ALSFR--LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +L +R  LA   DE  S         ++  + K    ++A  V  + ++  GG+GY+ + 
Sbjct: 320 SLLYRTVLARCQDEDVS---------MLTAMAKLKIGRLARKVTDQCLQIWGGAGYLNDN 370

Query: 429 SIARHYRESPANSILLGSGNAMV 451
            I+R +R+    SI  G    M+
Sbjct: 371 GISRAFRDFRIFSIGAGCDEVMM 393


>gi|114675631|ref|XP_001170290.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 7 [Pan
           troglodytes]
 gi|114675633|ref|XP_001170313.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 8 [Pan
           troglodytes]
 gi|114675635|ref|XP_512417.2| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 10 [Pan
           troglodytes]
 gi|332853284|ref|XP_001170352.2| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 9 [Pan
           troglodytes]
          Length = 438

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 289

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 290 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 348

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 349 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 401

Query: 432 RH 433
           RH
Sbjct: 402 RH 403


>gi|237785216|ref|YP_002905921.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758128|gb|ACR17378.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 389

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/254 (19%), Positives = 106/254 (41%), Gaps = 17/254 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  ++ ++ +K  D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 130 LSERGAGSDAGSMKTRARKDGDS-WVLNGSKCWITNGGKSTWYTVMAVTDPDKGANGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            +      G      + K+G + + T EL F +       ++GD             L  
Sbjct: 189 FMVHADDEGFVVGPKEKKLGIKGSPTAELYFEDCRIPADRIIGDEGTGF-----KTALET 243

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    ++    + +A+      + Y + R   G  + D    +  +AD+ + I AA  +
Sbjct: 244 LDHTRPTIGAQALGIAQGAFDQTVKYVKEREQFGRRIADFQNTQFMLADMKMKIDAARLM 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A++ +  +  +E      ++A  +K +   +A  V  +A++  GG GY  +  + R
Sbjct: 304 VYTAASNAE--RGHAEGGERLGMLAAGSKAFASDVAMQVTTDAVQLFGGYGYTRDFPVER 361

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 362 MMRDAKITQIYEGT 375


>gi|67541182|ref|XP_664365.1| hypothetical protein AN6761.2 [Aspergillus nidulans FGSC A4]
 gi|40739389|gb|EAA58579.1| hypothetical protein AN6761.2 [Aspergillus nidulans FGSC A4]
          Length = 403

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 29/257 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+TE   G +  A+ ++ +  S G  Y ++G K W   + ++   I+LA+ + R     
Sbjct: 125 FGVTEPNTGLETLALQTRAELNSTGTHYSITGQKIWITCAQVARKMILLARTKPREEVSK 184

Query: 258 VPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
             + L       D +  GL  +++K K+G R+    E+ F         L+G  N     
Sbjct: 185 PTQGLSMFCIDIDKNEPGLELKKIK-KMGGRAVDANEVFFDKYQVPASTLIGREN----- 238

Query: 309 VEDMKILIY-LDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E  +++++ +++    ++G       V+L  A  YA  RHV G  +     +   +AD+
Sbjct: 239 -EGFRMILHGMNAERCLLAGEALGLGYVALERAAEYANTRHVFGRAIGKNQAIAHPLADV 297

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEAMECI 419
            + + AA   ++  A  +D   SR++E+  A    + A   KY   + A      A+   
Sbjct: 298 YMKLEAAKLATYHAARLYD--ASRTDESIPAHSVGVAANSAKYLAAEAAFTACERAVLTH 355

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY  E  + R  RE
Sbjct: 356 GGMGYAMEYDVERWLRE 372


>gi|269140008|ref|YP_003296709.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda EIB202]
 gi|267985669|gb|ACY85498.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda EIB202]
 gi|304559840|gb|ADM42504.1| Crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda FL6-60]
          Length = 380

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     ++++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYLVVMARDGASPEKAVYSE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++        VELE  + FG      N      +  +
Sbjct: 183 WFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDLFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTALCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   E+  +S+        A + KY+C   A  V+  AM+ +GG G   +  I R 
Sbjct: 293 --MKNMLLESAWKSDNGLMTSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGDHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|170742882|ref|YP_001771537.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168197156|gb|ACA19103.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 401

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 20/219 (9%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIML 246
           P+   SV     +TE    GG+D + I ++ +++ DG Y + G KW+++     A FI++
Sbjct: 121 PIVAGSVRSAFAMTEPHPGGGSDPSMIRTRAERLPDGRYRIFGRKWYITGAAEAAHFILI 180

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD- 301
           A+        L   L     P     +R++           EL F          LLG+ 
Sbjct: 181 ARTSDDPRYGLTAFLFHRDQPGWEILRRIEIMGPEEHGGHCELAFDGLEVAPEDVLLGEG 240

Query: 302 -----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  V  GP      + +L  A+  V   R        YA  R   G  L ++  ++
Sbjct: 241 QGLKVTQVRLGPARLTHCMRWLGLAMRCVEIARA-------YAAEREGFGVRLAERESVQ 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +  +A+DI     L  R A   D+ +   +E + A+I
Sbjct: 294 LMLGGLAMDIEIGRLLVMRAAWELDQGRFARKEISMAKI 332


>gi|163732077|ref|ZP_02139523.1| isovaleryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161394375|gb|EDQ18698.1| isovaleryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +   ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPEASTLVVYAKTDPDAGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              + +    G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFIVEKEMAGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEEGRGVAVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+   M V +     Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-MDVVMP----YLAERKQFGKPVGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEEAMKQAHQAVQAMGGAGFLA 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +   AR +R++    I  G+
Sbjct: 351 DSPAARLFRDAKLMEIGAGT 370


>gi|219847054|ref|YP_002461487.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541313|gb|ACL23051.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 442

 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 47/292 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +P   + W P             PMQ+  +     LTE   G+  AA      + 
Sbjct: 158 IDLFGSPEQKQRWLP-------------PMQRFELIGSWALTEPDVGSATAAGLQTTARF 204

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             G + L+G  KW  ++P++D  I+ A+     +V  F+V    E  +P G   +RL+ K
Sbjct: 205 ERGHWVLNGAKKWSGNAPIADINIIWARDVSNNQVQGFIV----ERNTP-GYEVERLEGK 259

Query: 279 IGNRS--NATVEL---------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           I  R+  NA + L            N  GF         G    + I     +  M+   
Sbjct: 260 IALRTVQNANIRLVNCRIPEANRLPNVGGF--------RGVARQLAITRAAVAWAMTGVA 311

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M  +  +A+ YA++R   G  +    +++ ++  +  ++ A   +  R++         S
Sbjct: 312 MG-AYEQALTYAQQRIQFGRPIGSFQLVQNSLVQMLANVTAMQTMCLRMSQIAARTGKIS 370

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +E       A + K +C +     +A A   +GG+G + E  +AR++ ++ A
Sbjct: 371 QE------QASLAKVFCGEKMRETVALARAVLGGNGILLEHGVARYFADAEA 416


>gi|238920833|ref|YP_002934348.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella ictaluri 93-146]
 gi|238870402|gb|ACR70113.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella ictaluri 93-146]
          Length = 380

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     ++++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLQTTYTRKNGKVY-LNGSKCFITSSAYTPYLVVMARDGASPEKAVYSE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++        VELE  + FG      N      +  +
Sbjct: 183 WFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDLFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 242 FLV----ALTNYGTALCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNS----- 292

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   E+  +S+        A + KY+C   A  V+  AM+ +GG G   +  I R 
Sbjct: 293 --MKNMLLESAWKSDNGLMTSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGDHRITRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|218457977|ref|ZP_03498068.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 204

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ +K+ DG Y L+G K W  ++P++D F++ A+ E G +  F 
Sbjct: 56  FGLTEPDHGSDPGSMATRARKV-DGGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGF- 113

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              +LE G   GL    +  K+G R++ T E+     F
Sbjct: 114 ---ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDAVF 147


>gi|114675637|ref|XP_001170271.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 6 [Pan
           troglodytes]
          Length = 454

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 193 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 249

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 250 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 305

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 306 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 364

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 365 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 417

Query: 432 RH 433
           RH
Sbjct: 418 RH 419


>gi|41406821|ref|NP_959657.1| FadE12_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395171|gb|AAS03040.1| FadE12_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 388

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 47/266 (17%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251
            V +  G+TE   G D + IT+  ++  D  Y ++G K ++S  M SD  ++L + +   
Sbjct: 119 QVHVCFGVTEPGAGLDTSRITTFAKRDGD-RYIVNGRKVWISKAMESDKILLLTRTQAYD 177

Query: 252 -------------------RVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEF 291
                              RV    + ++  +  S N L    L+  + +R       E 
Sbjct: 178 EVTKKTDGMTLFITDLDRSRVDIRPIRKMGRNAVSSNELFIDNLEVPVEDRIG-----EE 232

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              F ++L  LN         ++LI    A  ++   RV+L +A+ Y   R V G  +  
Sbjct: 233 GKGFQYILDGLNPE-------RMLI----AAEALGIGRVALDKAVKYGNEREVFGRPIGM 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD    + AA  +  +    +D  K    EA  A       KY C       
Sbjct: 282 NQGLQFPLADSLARLDAAELMLRKATWLYDNGKPCGREANTA-------KYLCADAGFTA 334

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
              A++  GG GY EE  I R++RE+
Sbjct: 335 ADRALQTHGGMGYAEEYHITRYFREA 360


>gi|297517651|ref|ZP_06936037.1| putative acyl-CoA dehydrogenase [Escherichia coli OP50]
          Length = 214

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)

Query: 286 TVELEFSNTFGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            VE+E S+  G   +G LNV      +M+ LI   +A  S      +  +A  YA +R  
Sbjct: 46  NVEVEESDMVGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIA 100

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C
Sbjct: 101 FGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYC 153

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 154 ARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 200


>gi|134096633|ref|YP_001102294.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005713|ref|ZP_06563686.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133909256|emb|CAL99368.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 591

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 129/299 (43%), Gaps = 30/299 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVG-- 254
           +  GL+E+  G+D+ A   + +K+  G Y LSG K+ + ++ +SD   + A+ + R G  
Sbjct: 123 MAWGLSERHHGSDVLANEMRAEKVPGG-YLLSGEKYLIGNATVSDVVSLQARTDERGGPG 181

Query: 255 ---CFLV-PRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               F V  R    G+   L  +RL     + +G      V +  S+ FG     L +S 
Sbjct: 182 GWSLFAVDKRECAPGTFEHLPRERLHGLRASDLGGFRLDQVFVPESSRFGEEGRGLEISI 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  +I I      MS+  +  +L  A+ +A +R + G  +++ P  +R +A+   D+
Sbjct: 242 KGAQVARISI----CSMSLGAVDTALRLAMDFAEQREIFGRKVVEIPYSRRQLAECFADL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               AL        +  +      A A + + + KY+   +    +A+    +G   Y+ 
Sbjct: 298 LIGDAL------CTEAVRGLQGNPAQASVFSSVVKYFVPTLLERTMAQTSVVLGARLYLR 351

Query: 427 ERSIARHYRESPANSI--LLGSGNAMV------LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           +      Y++   + +  +   GN +V      L++  LL    +  E+L +  E+ +G
Sbjct: 352 DHPHFGVYQKMMRDVLVAIFADGNTVVNLKNIALELHELLGTARDPGEELRAGAEKSVG 410


>gi|118617923|ref|YP_906255.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium ulcerans Agy99]
 gi|118570033|gb|ABL04784.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium ulcerans Agy99]
          Length = 401

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++      D  Y ++G K F+++      I+    L + +GR  +
Sbjct: 131 MAITEPAFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKSKGRAAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+V R        G+  +RL++K+G + + T  + F N       LLG   +  G   
Sbjct: 190 KSFIVAR-----EHPGVIVERLEHKLGIKGSDTAVIRFDNARIPKDNLLGKPEIEMGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPVMKRAIA-----DI 362
              ++   D+    V+ M V +  A +   R+     GI ID  +P   ++ A      +
Sbjct: 245 S-GVMETFDNTRPIVAAMAVGIGRAALEEIRKILTDAGIDIDYDRPAYTQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+       I+K    +MA  V  + +E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNKIPNSKEAS-------ISKAKAGRMASDVTLKVVELAGTT 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQLLLEKWGRDSKILDIFEGT 380


>gi|73984516|ref|XP_533725.2| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
           9 isoform 1 [Canis familiaris]
          Length = 621

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 34/311 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ---------VE 250
           LTE   G+D A+I ++     D   Y L+G K W  +  +++ F + A+         V+
Sbjct: 180 LTEPTSGSDAASIKTRATLSEDKKHYILNGSKIWITNGGIANVFTVFAKTQVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++   +V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITALIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPIENVLGE--VGGG 292

Query: 308 PVEDMKILIYLDSAIMS-VSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ S V+GM   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSLVAGMLKKLIEMTAAYACTRKQFNKNLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GGSG
Sbjct: 353 TYVMESMAYLTAGMLDQPGFPDCSIEAAMVKVFSSEGAWQC-------VSEALQVLGGSG 405

Query: 424 YIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           Y+ +    R  R+S    I  G+     M + +  L   G  L  ++      ++ +  +
Sbjct: 406 YMRDYPYERLLRDSRILLIFEGTNEILRMYIALTGLQHAGRILTTRINELKRGNVTTVIE 465

Query: 482 KVITILRDSIS 492
            V   LRDS+S
Sbjct: 466 TVSQRLRDSLS 476


>gi|313224335|emb|CBY20124.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 107/279 (38%), Gaps = 42/279 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ--KISDGIYCLSG 230
           W    +  E       P   T   +G  GLTE   G++   + +  +  K +D      G
Sbjct: 128 WPISAYGTEEQKQKYIPDLATGKKVGCFGLTEPNHGSNPNGMETIAKYDKATDTYILNGG 187

Query: 231 HKWFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             W  +SP++D  I+ A+ E    ++  F++ R  E     G+    +  K   R+    
Sbjct: 188 KTWITNSPIADTLIIWARSEAHDMKIKGFILERQWE-----GISTPTIPGKYSLRA---- 238

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY--------LDSAIMSVSGMRVSLAEAIHYA 339
               S T    L ++ V   P E+    +         L++A   +    +  AEA  +A
Sbjct: 239 ----SETGSIFLDNVKV---PAENCMPHVEGLSGPFGCLNNARYGIGWGAMGAAEACFHA 291

Query: 340 RRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R +    I  D+P+     M+  + D+  +IA     +  L    D   + S E +   
Sbjct: 292 ARNYTLERIQFDKPLARQQLMQYKMGDMLSEIAYGLEAALTLGRRMDAGTASSSEIS--- 348

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               I K   C+ A  +   A + +GG+G  +E  I RH
Sbjct: 349 ----ILKRKNCQTALDISRTARDMLGGNGVQDEYHIIRH 383


>gi|297163062|gb|ADI12774.1| acyl-CoA dehydrogenase domain protein (OzmD) [Streptomyces
           bingchenggensis BCW-1]
          Length = 368

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 132/326 (40%), Gaps = 51/326 (15%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLG 201
           ++ L+ G L + + T  S +  + T +    W  + F +RE      A + +  +A  + 
Sbjct: 55  LSGLDNGELTAHAGTLCSSLRSVMTSQGMAAWTIQRFGTREQRSKELAALTRGDLA-AVA 113

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +E + G+D++AI +      D +  L+GHK W  +S  +D  ++  + +      LVP 
Sbjct: 114 FSEPQAGSDLSAIATTVVDDGDSVV-LNGHKVWSTASAYADVLVVFGRYQDGAAAVLVPT 172

Query: 261 LLEDGSPNGLCYQRLKNKIGNR--------------------SNATVELEFSNTFGFLLG 300
                   G+  + +   +G R                    S A+V L    T     G
Sbjct: 173 -----RAPGVTVRPIPQPLGCRAAGHADVLLEDVRLPATRVLSGASVALGLLTTIALTYG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            L+V+ G                 V  +R  L  A  +AR R   G  L +  ++ R +A
Sbjct: 228 RLSVAWG----------------CVGIIRACLGAAASHARDREQFGKPLAEHQLVARHLA 271

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ +    AT L    +  +D   SRS E + A ++A          A    + A++ + 
Sbjct: 272 EMYVAEQTATRLCEHASGCWD---SRSAELSSASVLAKHAAA---GHAAHTASAAVQILA 325

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
            +G ++  ++AR YR++    I+ GS
Sbjct: 326 SAGSVDGGTVARAYRDAKLMQIIEGS 351


>gi|302561455|ref|ZP_07313797.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479073|gb|EFL42166.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 394

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 17/259 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E    +  P   +   IG  GLTE   G+D  ++ +  ++   G + L+G K W  +
Sbjct: 117 FGSEEQKRHWLPRMASGEVIGCFGLTEPDHGSDPGSMRTHAKR-DGGDWVLNGRKMWITN 175

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++   ++ A+ +  +  F+VP         G     +K+K   R++ T EL   +   
Sbjct: 176 GSVAGVAVVWARTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDDVRL 230

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L   TG    +  L +    I+  ++   R     A+ YA+ R   G  +    +
Sbjct: 231 PADAVLPEVTGLKGPLGCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQL 290

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  V   
Sbjct: 291 TQAKLADMAVELHKGLLLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTV--- 347

Query: 415 AMECIGGSGYIEERSIARH 433
               +G +G   E  + RH
Sbjct: 348 ----LGANGISLEYPVMRH 362


>gi|91788341|ref|YP_549293.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91697566|gb|ABE44395.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 738

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 48/323 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           ++E   G+D  AI +Q +K+  G       KW  S+  +D  ++ AQ +        P L
Sbjct: 130 MSEDGAGSDFTAIGTQARKVEGGWSLTGAKKWIASARGADVALVFAQTD--------PAL 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------- 312
              GS    C+    N    R  A  ++E     G    +L+    P  DM         
Sbjct: 182 ---GSAGIACFIVNLNDPACRRVAGGDMEGLALAGIGGFELDAYVAPDSDMLYAPGDGFR 238

Query: 313 -------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                  K  +++  A M+   +  +L +A  Y   R V G  +I+Q  ++ ++ D+A+ 
Sbjct: 239 QAMAGVNKARVHM--AAMACGLLHGALQQATAYTASRMVFGQPVINQQGLRWSLVDVAMT 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 L+ R A+   +    +  AA     A    Y   +  PAV  + ++ +G  G  
Sbjct: 297 HDILQMLTHRAADLIQQGAPEAMNAA-----ASAKLYAGNETLPAV-GQCIQALGARGMT 350

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD------LGSS 479
            E+ + R    + A  +  GS N ++ D L     G ++F++   +  QD        S 
Sbjct: 351 HEQGLTRKLLAAKALCLADGS-NEIMRDRL-----GASVFQRYARSFRQDSPDGLTSTSP 404

Query: 480 GKKVITILRDSISLCKEDKGLAR 502
           G   +T    ++ + K++ G +R
Sbjct: 405 GDTAMTTF-SALYITKDESGASR 426


>gi|239916835|ref|YP_002956393.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281414704|ref|ZP_06246446.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838042|gb|ACS29839.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  SD ++++ +        +   
Sbjct: 123 LTEPGAGSDAAALKTRAVRDGDH-YVLNGVKQFISGAGASDCYVVMCRTADTGARGISAV 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++   +P GL +   + K+G  +  T ++ F +              GF +    ++ G 
Sbjct: 182 VVHKDTP-GLSFGPNEKKMGWHTQPTRQVIFEDVRVPVADRLGEEGDGFRIAMKGLNGG- 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+    S+ G   +L +A  Y + R   G  L  +  +   +AD+++ +  
Sbjct: 240 --------RLNIGACSIGGGLAALDKATRYLKERSAFGEPLTTKQALVFELADMSVKLET 291

Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  +  R A++ D     +    A A+++A  + Y            A++  GG GY+ E
Sbjct: 292 AHTMLMRAADALDRNDPDTVRLCAMAKLVATESGYEAADT-------ALQLHGGYGYLHE 344

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + +  R+   + IL GS   M
Sbjct: 345 YGVEKLVRDLRVHRILEGSNEIM 367


>gi|255525273|ref|ZP_05392214.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296187780|ref|ZP_06856174.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255511038|gb|EET87337.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296047737|gb|EFG87177.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 380

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 18/260 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A   S      D  Y L+G K F+++   +D +I+LA  +   G   +
Sbjct: 123 FALTEPCAGTDSAMQKSTAVLEGDH-YVLNGSKIFITNAGFADVYIVLAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317
              + +    G      + K+G R+++T EL F N    ++   N+     +  KI +  
Sbjct: 182 SAFIVEKDFPGFSVGNHELKMGIRASSTCELFFDNC---IVPKENLLGEEGKGFKIAMAT 238

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + ++   + +AE      I Y   R   G  +      +  +A +  +  AA  L
Sbjct: 239 LDGGRIGIAAQALGIAEGAIEETIKYVNERVQFGRTISKFQNTQFELAQMRANTEAAKLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A + D  +  +  AA A+++A        + A  V    ++  GG GY  +  I R
Sbjct: 299 VYQAACAKDNNEPYTHLAAMAKLVAS-------RNASDVTRRCLQLFGGYGYSSDYPIER 351

Query: 433 HYRESPANSILLGSGNAMVL 452
             R++    I  G+    ++
Sbjct: 352 MMRDAKITEIYEGTSEVQMM 371


>gi|239978161|ref|ZP_04700685.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291450057|ref|ZP_06589447.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291353006|gb|EFE79908.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 408

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +  EA+ YA+ R   G  +ID   +   +AD+   + AA  L +R +     
Sbjct: 273 MAVGTARAAYEEALEYAKTRTQFGRPIIDNQGVAFQLADMRTSVDAARLLVWRASWMAVN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V  +A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKQ------FTAAEGSMSKLFASETAKKVTGQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|172041367|ref|YP_001801081.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171852671|emb|CAQ05647.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 401

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 45/271 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE + G+D AA+ +   K+    Y L+G K F+++       ++ A V+   G    
Sbjct: 131 MAITEPQFGSDSAAVAATA-KLDGDEYVLNGEKIFVTAGERCTHVVVWASVDKSAGRAAI 189

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGP 308
             F+VPR     +P G    RL++K+G RS        S+T  F+L ++     N+   P
Sbjct: 190 KSFVVPR----DTP-GFELVRLEHKLGIRS--------SDTAHFILDNVRIPKDNLLGSP 236

Query: 309 VEDMK-----ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID--QPVMKRAIA 360
             D K     ++   D+    V+ M V +A A +   R      G+ ID   P   ++ A
Sbjct: 237 EVDTKKGFGGVMATFDNTRPLVAAMAVGVARASLERLREVLTDAGVKIDYDAPAWNQSAA 296

Query: 361 -----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                 +  D  AA  L+ R A   D     S+EA+       I K    +MA  +   A
Sbjct: 297 ASEYIRLESDWEAAYLLTMRAAWMADNKNPNSKEAS-------ICKAKAGRMATDLTLRA 349

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E  G  GY E   + +  R+S    I  G+
Sbjct: 350 VELAGAYGYSERDLLEKWSRDSKILDIFEGT 380


>gi|257095859|ref|YP_003169500.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048383|gb|ACV37571.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 36/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257
           L ++E   G+D+  +    ++  D  + L+G K W  +   +D  ++ A+ +       +
Sbjct: 128 LAMSEANAGSDVVGMKLAAERKGD-RFILNGSKMWITNGGDADTLVVYAKTDIHAAAKGI 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
              ++E G P   C  +L +K+G R         SNT+     D  V   P E++     
Sbjct: 187 TAFIVEKGMPGFSCGAKL-DKLGMRG--------SNTYPLFFDDCEV---PAENVLGQVD 234

Query: 313 ---KILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              ++L+  LD     ++G     M  ++   + Y   R   G  + +  +M+  IAD+ 
Sbjct: 235 GGARVLMSGLDYERAVLAGGPLGIMAAAMDLVLPYIHDRRQFGQAIGEFQLMQGKIADMY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                  +  + +  + D  ++  ++AA A + A     W       +  EA++ +GG+G
Sbjct: 295 TTFNVCRSYVYAVGEACDRGETTRKDAAGAILYAAEKATW-------MAGEAIQALGGNG 347

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI E    R +R++    I  G+
Sbjct: 348 YINEYPAGRLWRDAKLYEIGAGT 370


>gi|58260418|ref|XP_567619.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229700|gb|AAW46102.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 253

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + D   +G+   + +  +G R++ T  + F +    ++ + NV   P E  KI +   D
Sbjct: 53  FIVDADTDGIILGKKEINMGQRASDTRMVTFEDV---IVPEENVLGSPGEGFKIAMKAFD 109

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                VS   V LA     EA  YA+ RH  G  +I+   +   +AD+A+ + AA  L +
Sbjct: 110 ITRPLVSAAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVEAARGLVW 169

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A + D    R     YA     + K +  K A       ++  GG+G+  E  + + Y
Sbjct: 170 KAAWAKD---CRQRNTFYAS----MAKAFAGKTAVENANLGVQVFGGAGFNTEMPMEKLY 222

Query: 435 RES 437
           R++
Sbjct: 223 RDA 225


>gi|296167439|ref|ZP_06849838.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897187|gb|EFG76794.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITS-----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           + LTE  GG+D+  +T+     +G   + G   ++G K ++S+      I L     +  
Sbjct: 122 MALTEPGGGSDLQNMTTTALPVEGADGAPGGLRINGAKTWISNARRSGLIALLC---KTD 178

Query: 255 CFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               PR     +L  G   GL   R   K+G +   + EL F +   F + +  V  G +
Sbjct: 179 PNATPRHRGISILLVGHGPGLTVSRDLPKLGYKGVESCELSFDD---FPVPESAVLGGRM 235

Query: 310 ED--MKILIYLDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +   +++  L++  + V+   +     +L +A+ YA++R   G  +     +   +AD+
Sbjct: 236 GEGFSQMMKGLETGRIQVAARALGVGTAALEDALAYAQQRESFGKPIWKHQSVGNYLADM 295

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L+   A  +D  +    EA  A++ A        ++A  +   A+   GG 
Sbjct: 296 ATKLTAARQLTRYAAERYDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGY 348

Query: 423 GYIEERSIARHYRESPANSILLGSGN 448
           GY  E  + R++R++P   +++G G 
Sbjct: 349 GYSCEYDVERYFRDAPL--MIVGEGT 372


>gi|194245684|gb|ACF35457.1| MbcI [Actinosynnema pretiosum subsp. pretiosum]
          Length = 385

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 18/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G +E   G+D++A+T+      DG   ++G K W  ++  +D  ++     G     +V
Sbjct: 112 VGFSEPGAGSDLSAMTTTITDTGDGEVVVTGRKSWITAAHYADLLVVFGHYRGGASAVVV 171

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PVEDMKIL 315
           P         G+  +R+ N  G R+     +           D+   TG   P+     L
Sbjct: 172 P-----ADAPGVRVERVPNPSGCRAAGHSGITLDGVR-VPAADVLGGTGLPLPLVVTAAL 225

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  +  A   V  +R  LA A+ +   R   GG+L D  ++ R +A++ +    A   S
Sbjct: 226 TYGRVSVAWGCVGILRACLAAAVEHTTTREQGGGVLADHQLVARHLAELHVGEQVAARAS 285

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              +  +D   + S + A A + A   KY   + A A    A++ +G +G  +   +AR 
Sbjct: 286 EHASALWD---ANSPDLAVAAVQA---KYLASREAAAGSGRAVQLLGSAGASDGHVVARA 339

Query: 434 YRESPANSILLGS 446
           +R++    I+ G+
Sbjct: 340 HRDAKLMEIIEGT 352


>gi|281414311|ref|ZP_06246053.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 397

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 108/269 (40%), Gaps = 54/269 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGR 252
           G GLTE   G+D A  T     + DG + ++G K F+++  +D   ++        VEGR
Sbjct: 128 GFGLTEPGAGSD-AGGTQTTAALEDGQWRINGAKEFITNSGTDITSLITVTAVTGTVEGR 186

Query: 253 VG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            G            LVP   E     G    +  +K+G  S+ T  L F+        D 
Sbjct: 187 TGHDGRPAKEISTILVPAGTE-----GFSVAKAYDKVGWNSSDTHALHFT--------DA 233

Query: 303 NVSTGPVEDM---------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGI 348
            V   P E++           L  LD   ++++ +        + E++ YA++R   G  
Sbjct: 234 RV---PEENLLGARGRGFANFLEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFGQK 290

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   IA +     AA    +  A      K    EAA A+++A        + A
Sbjct: 291 IGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIA-------GEAA 343

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRES 437
                +A +  GG G++ E  +ARHYR+S
Sbjct: 344 MDNARDATQVFGGYGFMNETLVARHYRDS 372


>gi|270008306|gb|EFA04754.1| hypothetical protein TcasGA2_TC030576 [Tribolium castaneum]
          Length = 373

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 34/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  + +K  D  Y L+G K W  + P +D  ++ A  +        
Sbjct: 112 LAMSEPNSGSDVVSMKLRAEKKGDS-YVLNGTKFWITNGPDADVLVVYAVTDPNAKKPQH 170

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  F++    E G P      +L +K+G R + T EL F +       LLG  N     
Sbjct: 171 GISAFII----EKGFPGFKAGPKL-DKLGMRGSNTSELIFEDCEVPKENLLGAENKGV-- 223

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
                ++  LD   + ++G  + + +A       YA  R      + +  +++  +AD+ 
Sbjct: 224 ---YVLMSGLDLERLVLAGGPLGIMQACCDITFSYAHVRKQFQTRIGEFQLIQGKMADMY 280

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A  +  + +A + D  K  S++ A   +       +C + A  +  +A++ +GG+G
Sbjct: 281 TTIGACRSYLYNVAKACDNKKVNSKDCAGVIL-------YCAEKATQMALDAVQILGGNG 333

Query: 424 YIEERSIARHYRESPANSILLGS 446
           YI +    R  R++    I  G+
Sbjct: 334 YINDYPTGRLLRDAKLYEIGAGT 356


>gi|315501524|ref|YP_004080411.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315408143|gb|ADU06260.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D A++ ++ ++  D  + L+G K W  ++P++D  ++ A
Sbjct: 120 PAMAAGEAIGCFGLTEPDHGSDPASMATRARRDGDD-WILNGSKLWITNAPIADVGVIWA 178

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  V  F VP         G+  + +++K+  R++ T E+   +        L  + G
Sbjct: 179 RTDDGVRGFAVPM-----DTPGVTAREIRHKMSLRASLTGEIALDDVRLPADARLPEAIG 233

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I+  ++   R  L  A+ YA  R   G  L    + +  +AD+A++
Sbjct: 234 LKAPLGCLTEARHGIVWGALGAARDCLETALEYATTRTQFGRPLAGFQLTQAKLADMAVE 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 L+  L    D    R ++ +       + K    + A A+  +    +G +G  
Sbjct: 294 WNKGMLLALHLGRLADAGTLRPDQVS-------VGKLNNVREALAIARQCRTILGANGVS 346

Query: 426 EERSIARH 433
            E  + RH
Sbjct: 347 GEYPVMRH 354


>gi|302865027|ref|YP_003833664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302567886|gb|ADL44088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D A++ ++ ++  D  + L+G K W  ++P++D  ++ A
Sbjct: 120 PAMAAGEAIGCFGLTEPDHGSDPASMATRARRDGDD-WILNGSKLWITNAPIADVGVIWA 178

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  V  F VP         G+  + +++K+  R++ T E+   +        L  + G
Sbjct: 179 RTDDGVRGFAVPM-----DTPGVTAREIRHKMSLRASLTGEIALDDVRLPADARLPEAIG 233

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I+  ++   R  L  A+ YA  R   G  L    + +  +AD+A++
Sbjct: 234 LKAPLGCLTEARHGIVWGALGAARDCLETALEYATTRTQFGRPLAGFQLTQAKLADMAVE 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 L+  L    D    R ++ +       + K    + A A+  +    +G +G  
Sbjct: 294 WNKGMLLALHLGRLADAGTLRPDQVS-------VGKLNNVREALAIARQCRTILGANGVS 346

Query: 426 EERSIARH 433
            E  + RH
Sbjct: 347 GEYPVMRH 354


>gi|317121571|ref|YP_004101574.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591551|gb|ADU50847.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 43/268 (16%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSP 238
           REY P     + +  +    GLTE  GG+D  ++ ++ +K  DG  Y ++G K W  +  
Sbjct: 116 REYLPK----LARGEIVGCFGLTEPDGGSDPGSMKTRARK--DGSSYVITGRKMWITNGN 169

Query: 239 MSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++D  ++ A+  EG +  F+VP      +P G   + +K+K   R++ T EL        
Sbjct: 170 IADIAVIWAKDDEGVIRGFIVP----TDTP-GFRAREIKHKASLRASVTSEL-------- 216

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVS 345
           +L ++ V    +  +     L +A+  ++  R  +             EA+ +AR R   
Sbjct: 217 ILDEVRVDAAQM--LPEARGLGAALSCLTQARYGITWGAAGVIDAVFHEALEFARHRITF 274

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + ++ +++  + ++      A  +S+RL    DE K       YA++   + K    
Sbjct: 275 GRPIAERQLVQAKLVEMVESHTQALLMSWRLGKLKDEDK-----LTYAQV--SLAKRSNV 327

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433
           + A      A E +GGSG   E +  RH
Sbjct: 328 RAALQAARSAREILGGSGITLEYAAIRH 355


>gi|225181981|ref|ZP_03735414.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167343|gb|EEG76161.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 592

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 23/263 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D     ++     DG  Y L+G K F+++   +D  I  A+++G +   F+V
Sbjct: 146 LTEADAGSDAMNAKTKAVLTEDGKHYVLNGSKQFITNAAWADVIIAYAKIDGEKFTAFIV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
            R     +P G+     ++K+G + ++T  + F +       +LG +        ++  +
Sbjct: 206 DR----DTP-GVSIGAEEHKLGIKGSSTASVIFEDAKVPVENVLGQIGKGHQVAFNILNI 260

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                 +      + +L  A  YA+ R      +    ++K  IAD+ +      ++ +R
Sbjct: 261 GRYKLGVGCSGAAKYALEVASAYAQERQQFNLPIAKFGMIKNKIADMNIHTYITESICYR 320

Query: 376 ---LANSFDEAKSRSEEAAYARIMAPITKYWC-CKMAPAVIAEAM-----ECI---GGSG 423
              L NS  E      E A  ++   I +Y   C +   V +EA+     EC+   GG G
Sbjct: 321 TGGLINSLVENLDMDAEDAGQKVSEGIQEYATECSIVKIVGSEALDFVADECVQILGGYG 380

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E    R YR+S  N I  G+
Sbjct: 381 YCSEYPAERIYRDSRINRIFEGT 403


>gi|222479919|ref|YP_002566156.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452821|gb|ACM57086.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 382

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 118/257 (45%), Gaps = 23/257 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +     GL ++E   G+D+A +T++ +K+ DG Y L+G K+++ + + +D   + A+
Sbjct: 116 PVAENDQISGLAVSEPETGSDLAGMTTKAEKV-DGGYELTGEKYWVGNAVEADWLTVYAK 174

Query: 249 V---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
               E R   + +   + +   +G   + +  K+G R++    + F + F   + + NV 
Sbjct: 175 TGDSEDRYSNYTL--FIVETDSDGYEAEHIPEKMGMRASKQGHIVFEDCF---VPEENVV 229

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
                   +L  + +   + V G  + LA A       +   R+  G  + +   ++  +
Sbjct: 230 GSEGGGFYVLADFFNHGRVIVGGHGLGLAAAAIEEAEEFVHGRNAFGRTVNEFQAVQHTL 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +D+ +   +A AL++R      E  + ++ A Y    A + K    ++A     + M+  
Sbjct: 290 SDMRIGFESARALNWRAC----EKVADNDNAGY---WAALAKTKSTEVATDCAEKGMKLH 342

Query: 420 GGSGYIEERSIARHYRE 436
           GG   + +R IAR YR+
Sbjct: 343 GGRSILTDRRIARVYRD 359


>gi|254823202|ref|ZP_05228203.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 650

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 23/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCF 256
           LTE   G+D A + S    I DG  Y L G K W  +  +++  +++A+V   EGR G  
Sbjct: 170 LTEPDVGSDPARLASTATPIDDGQAYELDGVKLWTTNGVVAELLVIMARVPKSEGRRGG- 228

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           +   ++E  SP G+  +R    +G R    +E   +      +   N+     + +KI L
Sbjct: 229 ISAFVVEADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPRENLIGSEGDGLKIAL 284

Query: 316 IYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L++  +S+        + +L  A  ++  R   G  L +   + R ++ IA  + A  
Sbjct: 285 TTLNAGRLSIPASATGSSKWALKIAREWSGERVQWGKPLAEHEAVARKLSFIAATVYALD 344

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A+    A   DE ++        RI A + K W  +MA  +  E M+  GG GY    S+
Sbjct: 345 AVLELSAQMADEGRND------IRIEAALAKLWSSEMACVIADEVMQIRGGRGYETAESL 398

Query: 431 -ARHYRESPANSIL 443
            AR  R  P    L
Sbjct: 399 AARGERAVPVEQAL 412


>gi|149709719|ref|XP_001497474.1| PREDICTED: similar to Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (MCAD) [Equus caballus]
          Length = 426

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 45/267 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +LA+ +      L P+
Sbjct: 165 VTEPGAGSDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARTD------LDPK 217

Query: 261 ----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVS 305
                     ++E  +P G+   R +  +G R         S+T G +  D+     NV 
Sbjct: 218 APANKAFTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVKVPKENVL 268

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
            G     KI +   D     V+   V LA     EA  YA  R   G +L++   +   +
Sbjct: 269 IGEGAGFKIAMGSFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQGVSFLL 328

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ +  A     R A   D  +  +         A I K +   +A  +  +A++  
Sbjct: 329 AEMAMKVELARLSYQRAAWEIDCGRRNT-------YYASIAKAFAGDIANQLATDAVQIF 381

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+G+  E  + +  R++    I  G+
Sbjct: 382 GGNGFNTEYPVEKLMRDAKIFQIYEGT 408


>gi|110760324|ref|XP_391840.3| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Apis
           mellifera]
          Length = 400

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 50/271 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           L ++E   G+D+ ++  + +K +D  Y L+GHK W  + P +D  I+ A+ +        
Sbjct: 139 LAMSESTSGSDVVSMKLRAEKKND-YYILNGHKFWITNGPDADTIIVYAKTDPNAIKQQH 197

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F+V R  E     G    +  +K+G R + T EL F         D  V   PV++
Sbjct: 198 GITAFIVERDFE-----GFSIAQKLDKLGMRGSNTGELVFQ--------DCKV---PVKN 241

Query: 312 MKILIYLDSAIMSV-SGM---RVSLAE------------AIHYARRRHVSGGILIDQPVM 355
             +L  ++  I  + SG+   RV+LA             A  YA  R      + +  ++
Sbjct: 242 --VLGQVNKGIYVLFSGLDLERVTLAAGPLGIIQACCDVAFEYAHVRKQFEKRIAEFQMI 299

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA++   ++A  +  + +  S D      ++ A A I+      +  + A     +A
Sbjct: 300 QEKIANMYTSLSACRSYLYSVVRSCDAGYINRKDCA-AVIL------YIAECATKAALDA 352

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG+GYI +    R  R++    I  G+
Sbjct: 353 IQILGGNGYINDYPTGRLLRDAKLYEIGAGT 383


>gi|94985323|ref|YP_604687.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555604|gb|ABF45518.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 42/289 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           +AL  +     +W PK+   E               IG  GLTE  GG+ +    SQG +
Sbjct: 183 IALGGSAEQKAEWLPKMLDLE--------------TIGAFGLTEPEGGSQV----SQGMR 224

Query: 221 IS---DGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQ 273
            +   DG  + L+G K W  +S  SD  ++ A+    G V  F+V      G+P G   +
Sbjct: 225 TTCQRDGDHWILNGEKKWIGNSTFSDFTVVWARDVDTGEVRGFIV----RAGTP-GYDVR 279

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           ++  KI  R      +  ++        L  + G     ++L  L  A ++  G+  +L 
Sbjct: 280 KIAGKIALRMVENGHITLTHCRVPDTDRLQETRGWRTTAEVL-RLTRAGVAWQGVGCALG 338

Query: 334 E---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A+ YA+ R   G  +    +++  +  +  ++    +L  RL+   D  + R E A
Sbjct: 339 AYELALKYAQTREQFGKPIGAFQLIQNHLVHMLGNVTTTLSLCLRLSQMADAGQMRDEHA 398

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           A A++   +T   C +     +A A E  GG+G + +  +A+H+ ++ A
Sbjct: 399 ALAKV---VTAARCRE----TVALARETFGGNGILLDHLVAKHFADTEA 440


>gi|126435571|ref|YP_001071262.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235371|gb|ABN98771.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 415

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 40/285 (14%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGI--YCLSGHKWFLSS-PMSDAFIMLAQV-EG----- 251
           +TE   G+D    + S   + +DG   Y L+G K F+++ P +D  ++ A++ EG     
Sbjct: 146 ITEPDSGSDAFGGMKSYVVRAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEGDGVDK 205

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              +V  F++ R +E     G    +   K+G  S+ T EL F+N     LG   +  G 
Sbjct: 206 RDRKVLTFVLDRGME-----GFVQSKPFRKMGIHSSRTGELFFNNV---RLGRDRL-LGE 256

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMK 356
            ED +     +SA  S S  R+ +A             ++ YA+ R + G  +    +++
Sbjct: 257 TEDNEAGDGRESARSSFSAERIGVAAMALGVIEECLKLSVDYAKSRTLWGKEIGQFQLIQ 316

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A + +       + FR+     EA       + A   A   K++C + A  V  EA+
Sbjct: 317 LKLASMEVARMNVRNMLFRVI----EASQTGTPISLAE--ASAIKWYCSQAATDVAMEAV 370

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG+GY+ E  + +  R++ +  I  GS    +  V   L  G
Sbjct: 371 QLFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHVAKGLLSG 415


>gi|242212672|ref|XP_002472168.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728726|gb|EED82614.1| predicted protein [Postia placenta Mad-698-R]
          Length = 440

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 18/239 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
            GLTE   G+D A + +  ++ +DG + ++G K W  +SP++D FI+ A+   +G++  F
Sbjct: 182 FGLTEPNHGSDPAGMETTAEE-TDGGFVINGAKTWITNSPIADIFIIWARAKWDGKIHGF 240

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           ++ + +E     GL    +K+K+  R +AT  +   N        L   +G       L 
Sbjct: 241 VLEKGME-----GLSAPAIKHKLALRCSATGSIFMDNVKVGHDAILPHGSGMGAPFSCLN 295

Query: 317 YLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                I   ++  +  S+A    YA  RH     L    ++++ + D   + A     S 
Sbjct: 296 SARYGISWGAIGALEDSIARTRAYALERHQFKRPLASFQLVQKKLVDAHTEAALGLQASL 355

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++    D  K   E       M  + K   C  A       ++ +GG+   +E  + RH
Sbjct: 356 QVGRLKDAGKLAPE-------MISMVKRNNCGKALEHSRRLLDILGGNACSDEYHVGRH 407


>gi|220924540|ref|YP_002499842.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949147|gb|ACL59539.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 409

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 20/219 (9%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIML 246
           P+   +V     +TE    GG+D + I ++ ++  DG Y + G KWF++     A FI++
Sbjct: 121 PIVSGAVRSAFAMTEPHPGGGSDPSMIRTRAERGPDGRYRIYGRKWFITGAEDAAHFILI 180

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD- 301
           A+        L   L     P     +R+            EL F          LLG+ 
Sbjct: 181 ARTSDDPRHGLTAFLFHRDQPGWEIVRRIPIMGPEEHGGHCELAFDGLEIAPEDVLLGEG 240

Query: 302 -----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  V  GP      + +L  A+  V   R        YA  R   G  L D+  ++
Sbjct: 241 KGLKVTQVRLGPARLTHCMRWLGLAMRCVEIARA-------YAAERKGFGMRLADRESVQ 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +  +A+DI     L  R A   D+ +   +E + A+I
Sbjct: 294 LMLGGLAMDIEIGRLLVMRAAWELDQGRFARKEVSMAKI 332


>gi|114800342|ref|YP_762052.1| isobutyryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114740516|gb|ABI78641.1| isobutyryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 566

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 43/334 (12%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++ +  TP     W P I S E  PT                TE   G
Sbjct: 257 GSLGTRSEIAAELILIGGTPEQKAKWLPVIASGEILPTAV-------------FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ ++ ++  K +DG  Y ++G+K +++ P+ +D   ++A+ +     F    +L    
Sbjct: 304 SDLGSLRTRAVKSADGTHYAVTGNKTWITHPVRADLMTLMARTDPATNNFSGLSMLLAEK 363

Query: 267 PNGLCYQRLKNK---------IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KI 314
           P G   +    +         +G R     E+ F N   F +   N+  G VE     ++
Sbjct: 364 PRGTDAEPFPAEGMTGGEIEVLGYRGMKEFEIGFDN---FKVKSENL-LGGVEGQGFKQL 419

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   V +A+      + YA  R   G  +   P +   +  +A ++   
Sbjct: 420 MATFESARIQTAARAVGVAQNALEVGLRYALDRQQFGQAIFKFPRVSNKLVMMAAELVGM 479

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   D  K    EA        + K    + A A    A++  GG+G+  E  
Sbjct: 480 RQLTYFSARQKDNGKRCDLEAG-------MAKLLAARAAWAAADNAVQIHGGNGFALEYP 532

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           I+R  +++   +I  G+G    + +   L +G N
Sbjct: 533 ISRILQDARILNIFEGAGEVQAMVIARRLVEGGN 566


>gi|58260416|ref|XP_567618.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229699|gb|AAW46101.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 204

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + D   +G+   + +  +G R++ T  + F +    ++ + NV   P E  KI +   D
Sbjct: 4   FIVDADTDGIILGKKEINMGQRASDTRMVTFEDV---IVPEENVLGSPGEGFKIAMKAFD 60

Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                VS   V LA     EA  YA+ RH  G  +I+   +   +AD+A+ + AA  L +
Sbjct: 61  ITRPLVSAAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVEAARGLVW 120

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A + D    R     YA     + K +  K A       ++  GG+G+  E  + + Y
Sbjct: 121 KAAWAKD---CRQRNTFYAS----MAKAFAGKTAVENANLGVQVFGGAGFNTEMPMEKLY 173

Query: 435 RES 437
           R++
Sbjct: 174 RDA 176


>gi|76801526|ref|YP_326534.1| acyl-CoA dehydrogenase 11 [Natronomonas pharaonis DSM 2160]
 gi|76557391|emb|CAI48968.1| acyl-CoA dehydrogenase 11 [Natronomonas pharaonis DSM 2160]
          Length = 405

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 29/260 (11%)

Query: 190 PMQKTSVAIGLGLTE--KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
           P+    +  G  +TE  + GG+D   + +  +K  D  + ++GHKW+ +  + +D  ++ 
Sbjct: 119 PLVAGDIVSGFSMTEPMQGGGSDPKMLKTTAEKDGDE-WVINGHKWWTTKGIQADILLVF 177

Query: 247 AQVEGRV----GC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNTF--- 295
           A+ +       GC  F+VP        +G+  +R    +G+ ++     E++++N     
Sbjct: 178 ARTDQEAHPYEGCSVFIVP-----ADADGVEIERNIPHLGSETHGIGHAEIKYNNVRVPE 232

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPV 354
             LLG   +    V++      L +  M  SGM   +L  A  Y   R   G  L ++ V
Sbjct: 233 EHLLGQEGMGFAHVQERLGPARL-THCMRYSGMAERALDIATAYMSEREAFGSKLAEKQV 291

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A+    +AAA AL  + A+S             AR+   + K +   +    +  
Sbjct: 292 PRHEVAEHRTRLAAARALIRQAADSISAGNE-------ARLEVSMAKVFTANVTQEAVDT 344

Query: 415 AMECIGGSGYIEERSIARHY 434
           +++  GG+G  ++  IA  Y
Sbjct: 345 SLQFCGGNGIAKDLPIADFY 364


>gi|254384299|ref|ZP_04999642.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343187|gb|EDX24153.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 409

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMRTQIDAARLLVWRASWMTVA 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  ++A  V A+A++ +GG+GY  E  + R +R+S   +I
Sbjct: 334 GKP------FTSAEGSMSKLFASEVAKKVTAQAVQILGGNGYTREYPVERMHRDSAIYTI 387

Query: 443 LLGS 446
             G+
Sbjct: 388 FEGT 391


>gi|110680481|ref|YP_683488.1| isovaleryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109456597|gb|ABG32802.1| isovaleryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +   ++ A+ +   G   +
Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPEAATLVVYAKTDPDAGAHGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310
              + +    G       +K+G R + T EL F +    F  +LG+       + +G   
Sbjct: 187 TAFIVEKEMAGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEEGRGVAVLMSGLDY 246

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +  +L  + + IM+   M V +     Y   R   G  +    +M+  IAD+   + +A 
Sbjct: 247 ERVVLAGIGTGIMAAC-MDVVMP----YLAERKQFGKPVGSFQLMQGKIADMYTAMNSAR 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426
           A  + +A + D      ++AA            CC    + A     +A++ +GG+G++ 
Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEEAMKQAHQAVQAMGGAGFLS 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +   AR +R++    I  G+
Sbjct: 351 DSPAARLFRDAKLMEIGAGT 370


>gi|170690781|ref|ZP_02881947.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144030|gb|EDT12192.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 402

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)

Query: 186 TNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243
           T   P      AI    L+E   G+D+AA++   ++  D  Y L G K W  +  ++D +
Sbjct: 119 TRYLPRVANGTAIAAFALSEPEAGSDVAAMSLAAREDGDA-YILDGDKTWISNGGIADFY 177

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+     G   +   + D    GL      + I    +    L F+   G  +    
Sbjct: 178 VVFARTGEAPGARGISAFIVDADTPGLEIAERIDVIA--PHPLARLHFA---GARVPRSQ 232

Query: 304 VSTGPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E  K+      +     A  S+   R ++AE +  A  R + G  L D  + + 
Sbjct: 233 MLGAPGEGFKLAMRTLDIFRTSVAAASLGFARHAMAEGLARAASRKMFGQTLADFQLTQA 292

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +AL + ++  L +R A   D+ +S + EAA A       K+   + A  VI  A++
Sbjct: 293 KLAQMALTLDSSALLVYRAAWLRDQGESVTREAAMA-------KWHASEGAQQVIDAAVQ 345

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446
             GG G      +   YRE  A  I  G+
Sbjct: 346 LHGGMGVQSGVPVEMLYREIRALRIYEGA 374


>gi|183221677|ref|YP_001839673.1| acyl coenzyme A dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911751|ref|YP_001963306.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776427|gb|ABZ94728.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780099|gb|ABZ98397.1| Acyl coenzyme A dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 376

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 125/292 (42%), Gaps = 26/292 (8%)

Query: 170 VHKD-WAPKIFSREYDPTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGI 225
           +H D  AP I +   D   K  + K +     + + +TE   G+D+ ++ +      D  
Sbjct: 90  LHNDVIAPYISTYANDEQKKRWLPKCASGESILAVAMTEPGAGSDLKSLRTSAVDKGDH- 148

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+S+  ++D  I   + +      L   ++E+G   G    R  +KIG ++ 
Sbjct: 149 FVVNGQKTFISNGQLADLIITAVKHDNGTISLL---MIEEGM-KGFERGRNLDKIGLKAQ 204

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHY 338
            T EL F++    ++   N+     +  + L+       L  A+ +V   R+     + Y
Sbjct: 205 DTSELYFNDV---IVPKTNLIGKQGQGFRYLMQKLAQERLVLAVAAVEATRLVQTITLQY 261

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      K  +A++A ++  A     ++     + ++ + EA+       
Sbjct: 262 IKERKAFGQKIGSFQNTKFKMAEMATELEMAQVFCDKVVMEHMKGENTTAEAS------- 314

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + K++  +M      E ++  GG GY+ E  IAR Y ++   +I  G+   M
Sbjct: 315 MCKWYATEMQKRHTDECLQFFGGYGYMMEYPIARAYLDARIQTIYAGTTEIM 366


>gi|255932253|ref|XP_002557683.1| Pc12g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582302|emb|CAP80480.1| Pc12g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 441

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 30/189 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGR----V 253
           + +TE   G+D+A IT+   K +DG  Y L+G  KW  +   SD   M  +  G     +
Sbjct: 160 IAITEPEAGSDVANITTTAVKSADGQHYILNGSKKWITNGIWSDYATMAVRTGGPGAAGL 219

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---- 309
              +VP     G P G+  +RLK   G  +  T  +E        L D+ V    +    
Sbjct: 220 SVLVVPL---KGHP-GVSMRRLKVS-GQITGGTTYIE--------LDDVKVPVSNIIGKE 266

Query: 310 -EDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            + M+I++       L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A  
Sbjct: 267 GDGMRIIMTNFNHERLVIAVGVTRQARVALSAAFSYCLKREAFGKTLMDQPVVRHRLAKA 326

Query: 363 ALDIAAATA 371
             ++ +  A
Sbjct: 327 GAELESMWA 335


>gi|114675647|ref|XP_001170189.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 2 [Pan
           troglodytes]
 gi|114675649|ref|XP_001170211.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 3 [Pan
           troglodytes]
          Length = 359

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 98  FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 154

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              LLE G   GL   R++ K   R++AT  +      G  + + NV  G          
Sbjct: 155 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMD---GVEVPEENVLPGASSLGGPFGC 210

Query: 318 LDSAIMSVSGMRVSLAE-AIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L++A   ++   +  +E  +H AR     R        ++Q + K+ + ++ ++I  +  
Sbjct: 211 LNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKK-LENMLIEITLSLH 269

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              +     D+ K+  E       M  + K   C  A  +  +A + +GG+G  +E  + 
Sbjct: 270 ACLQFGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVI 322

Query: 432 RH 433
           RH
Sbjct: 323 RH 324


>gi|301348227|ref|ZP_07228968.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513569|ref|ZP_07238806.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596701|ref|ZP_07241709.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
          Length = 194

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 30/210 (14%)

Query: 232 KWFLSSPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           ++  ++P +  F ++A+        G +  FLV    E  +P G+   ++  K+G + + 
Sbjct: 1   RFITNAPHAATFTVMARTNPEIKGSGGISAFLV----EANTP-GITLGKIDQKMGQKGSH 55

Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           T ++ F N       L+G +    G    MK+L   D   + +    V +AE     A+H
Sbjct: 56  TCDVIFENCRVPASALIGGVE-GVGFKTAMKVL---DKGRLHIGAYSVGVAERMLNDALH 111

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S EA+ A++ A
Sbjct: 112 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTEASCAKMFA 171

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                   +M   V    ++  GG+GYI E
Sbjct: 172 T-------EMCGRVADRCVQIHGGAGYISE 194


>gi|238059129|ref|ZP_04603838.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237880940|gb|EEP69768.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 221

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           E+     P   +    AL++ P V       W P++ S + D         T++  G  +
Sbjct: 136 ESATFSCPVAMADGAAALLSLPEVDSGVRDAWLPRLTSTDPD---------TAIVSGQWM 186

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           TE +GG+D++  ++ G+  +DG + L+G KWF S+
Sbjct: 187 TESQGGSDLSGSSTVGRPAADGSWRLTGQKWFCSA 221


>gi|158521871|ref|YP_001529741.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510697|gb|ABW67664.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 423

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 26/263 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVE--------GR 252
           LTE RGG+D     ++     D  + L+G K F+  +  +D FI+  +          GR
Sbjct: 127 LTEPRGGSDFFGAMTRADLEGDH-FILNGQKRFVVGAEGADFFIVYCRTNFDANAHKYGR 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +   +V     D  P G+  + L   +G R   T  L F +       L+G+L+      
Sbjct: 186 LSLLIV-----DKGP-GVEVEYLYGLMGCRGGGTGRLVFRDVKVPKENLIGELHSGALCF 239

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M I   + SA  S+      L  A+ Y+ RR   G  +     +   +AD  + + AA
Sbjct: 240 HQMMIPERMTSAGGSLCAW-AGLDLAVRYSNRRRAFGKEIRKYQAVNFLVADSIMQLDAA 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +  A + D            R +    K +  + A  ++  AM+ +GG GY +   
Sbjct: 299 RGLCYIAAKAVDNNYPN------LRRLVSEAKRFATESAWKIVNNAMQIMGGIGYTDVYP 352

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           I R  R++    I  G+   M L
Sbjct: 353 IERALRDTRLAMIWTGTNEIMNL 375


>gi|324505490|gb|ADY42358.1| Glutaryl-CoA dehydrogenase [Ascaris suum]
          Length = 418

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 15/239 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G++ A + ++ +   +  +Y LSG K W  +SP++D  I+ A+ + R    +
Sbjct: 158 FGLTEPNHGSNPAGMETKARWDGNAKVYKLSGTKSWISNSPVADVMIVWARSD-RHDNEI 216

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKI 314
           +  +LE G  +GL   +++ K+  R++ T ++   E       LL ++    GP   +  
Sbjct: 217 MGFILERGM-SGLTTPKIEGKLSLRTSVTGQIAMDEVPVPEENLLPNVKGIVGPFGCLNN 275

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  ++   R     A  YA  R   G  L    +++  +AD+  +I+       
Sbjct: 276 -ARLSIAWGALGAARTCFEIARDYALERPQFGRPLAKNQLIQVKLADMLTEISIGLHACL 334

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           R+    DE     ++ +       + K   C  A  +  +A + +GG+G ++E  + RH
Sbjct: 335 RVTRLKDEKSCSPQQIS-------LIKRNSCGKALEIARKARDILGGNGIVDEYHVMRH 386


>gi|294651603|ref|ZP_06728908.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822512|gb|EFF81410.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 390

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 30/286 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E                 + +TE   G+D+ A+ +      D  Y ++G 
Sbjct: 120 QKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLEGDE-YVINGS 165

Query: 232 KWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++  + D  I++ +      G   +  ++ +    G    +  NKIG +   T EL
Sbjct: 166 KIFITNGYLCDMAIVVCKTGNTEKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCEL 225

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       LLG   +  G +  MK L +  +  AI+  +G   + A  + Y + R  
Sbjct: 226 FFDNVRVPKENLLGMEGI--GFMMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKA 283

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++  +I              D       E +     A   KY  
Sbjct: 284 FGKPIGTFQNTRFKLAELRTEIDFCRTY-------LDRCMELQLEESLGVDAAAAAKYKI 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 337 SDMFSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIM 382


>gi|148272206|ref|YP_001221767.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830136|emb|CAN01065.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 392

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 48/292 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQK 220
           VA+  +P    +W P+  S E             +    GLTE   G+D A  + +   +
Sbjct: 109 VAVAGSPEQRAEWLPRFASGE-------------ILGSFGLTEPLSGSDSARGLRTVATR 155

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D        +W  +  +SD  ++ A+   +G+V  FLVP    + SP G    R+++K
Sbjct: 156 RGDEWSITGSKRWIGNGTISDVTVIWAKDADDGQVKGFLVP----NDSP-GFRATRIEDK 210

Query: 279 IGNR--SNATVELEFSNTFGFLLGDLN-VSTGP-VEDMKILIYLDSAIMSVSGMRVSLAE 334
              R   NA +EL+     G ++ + N +  G    D   ++ L  A ++ + + +S+  
Sbjct: 211 QALRIVQNADIELD-----GVIVPERNRLQNGTSFADTAAVLRLTRAEVAWAAIGISIGA 265

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ Y   R   G  L    +++  +     +I A+  L  R +   DE     E +A
Sbjct: 266 YEAAVAYTGEREQFGKPLGAHQLIQDLLVRSLGNITASIGLVTRASEMVDEGTQSDEHSA 325

Query: 392 YARIMAPI----TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            A+  A      T  WC            E  GG+G + +  +AR + ++ A
Sbjct: 326 LAKAYATSRMRETVAWC-----------REAFGGNGIVLDYDVARFFADAEA 366


>gi|78060403|ref|YP_366978.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964953|gb|ABB06334.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 42/259 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   +    +K  DG Y +SG K F+S+  ++D  ++LA+         +
Sbjct: 123 FAVTEPDTGLDTTKLKVVAKKQPDGNYLISGKKVFISTAQVADHMLILARTTP------I 176

Query: 259 PRLLEDGSPNGLCYQRLK---------NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            ++ +      L Y +L          +K+G  +  T EL         + DL VS   +
Sbjct: 177 EQVKKHSEGLSLFYTKLDRRYVDIREIDKLGRAAVDTNEL--------FIDDLPVSKDEL 228

Query: 310 --EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             E+ K L Y+           A+  V   R  L  A  YA+ R V G  +     ++  
Sbjct: 229 IGEEGKGLSYIFHGMNAERVLVAVEQVGIGRAVLNLATQYAKERVVFGRPIGQNQGVQHP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A    ++ AA  + F  A+ +D  +S   EA  A+++A       C+        A+  
Sbjct: 289 LARNWAELEAANHMIFAAADLYDRGQSCGSEANAAKLLASEACMNACQT-------AILT 341

Query: 419 IGGSGYIEERSIARHYRES 437
            GG GY +E  + R  RE+
Sbjct: 342 HGGFGYAKEYHVERFMREA 360


>gi|312960846|ref|ZP_07775351.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311284504|gb|EFQ63080.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 383

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE + G++   + ++ + + DG + ++G K F+S    + ++  F +     G+ G   
Sbjct: 126 LTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPALGKKGISA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           FLVP         G    R ++K+G R++ T  +         +N  G     L ++   
Sbjct: 185 FLVPT-----DTAGFVVDRTEHKMGIRASDTCAVTLNQCTVPEANLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +AD+   + A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARDRVQFDKAIIEHQSVANLLADMQTRLNA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A      K    EA+ A++ A        +MA  V + AM+  GG GY+E+ 
Sbjct: 296 ARLLILHAARLRSAGKPCLSEASQAKLFAS-------EMAEKVCSSAMQIHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 349 PVERYYRDARITQIYEGT 366


>gi|295700877|ref|YP_003608770.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440090|gb|ADG19259.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTRIKTTAERRGD-RYVINGQKVWISRVQHSDLMILLARTTPLADVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L + + +GL  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFIVD--LREATGHGLTVQPILNMVNHETN---ELFFDNLEIPAENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   YA+ R V G  +     
Sbjct: 235 FKYILDGLNAE-------RTLI----AAECIGDGYWFVDKVTEYAKERVVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + F  A  FD  +    +A  A+++A          A A    
Sbjct: 284 VQFPIARSFINVEAASLMRFEAARRFDAHQPCGAQANMAKLLA----------ADASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 334 ANACLQFHGGFGFACEYDVERKFRET 359


>gi|315182691|gb|ADT89604.1| hypothetical acyl-CoA dehydrogenase [Vibrio furnissii NCTC 11218]
          Length = 389

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 34/280 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253
           L ++E   G+D+ ++  + ++  D  + L+G K W  + P +   I+ A+ +       +
Sbjct: 130 LAMSEPNAGSDVVSMQLKAERRGDH-FVLNGSKMWITNGPDAQVVIVYAKTDPNAKSRGI 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
             F+V R      P     Q+L +K+G R + T EL F N       +LG+LN     +E
Sbjct: 189 TAFIVERDF----PGFYSAQKL-DKLGMRGSNTCELVFENCPVPAENILGELNQG---IE 240

Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  +  +++      M+  L   + Y   R   G  + +  +++  +AD+   + 
Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACLDLVLPYVHDRKQFGHAIGEFQLVQAKVADMYTRLN 300

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA A  + +AN+ D  +   +++A   +       +  ++A  +  +A++ +GG+GYI E
Sbjct: 301 AARAYVYAVANACDRGEVTRKDSAGVIL-------YAAELATQMALDAIQLLGGNGYINE 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
               R  R++    I  G+G + +  +L     G  LFE+
Sbjct: 354 FPAGRLLRDAKLYEI--GAGTSEIRRIL----IGRELFEE 387


>gi|26327643|dbj|BAC27565.1| unnamed protein product [Mus musculus]
          Length = 625

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|328880866|emb|CCA54105.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 404

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +I+   +   +AD+A  I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRVQFGRPIIENQGVAFQLADMATQIDAARLLVWRASWMATA 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  ++A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKP------FTSAEGSMSKLYASEVAKKVTAQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|291008274|ref|ZP_06566247.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 15/266 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  A+ ++ +   D  + L+G K W  +  +S  + ++A  E   G   +  
Sbjct: 130 LSEREAGSDAGAMKTRARLDGDH-WVLNGTKCWITNGGVSKWYTVMAVTEPDKGANGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                   G      + K+G + + TVEL F +    +  D  +          L  LD 
Sbjct: 189 FAVHADDPGFTVGPKEKKLGIKGSPTVELYFEDCT--IPADRIIGEPGTGFKTALRTLDH 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    + +A+     A+ Y + R   G  + D   ++  +AD+A+ I AA  + + 
Sbjct: 247 TRPTIGAQALGIAQGALDAALDYVKERKQFGKAISDFQGVQFMLADMAMKIEAARHMVYV 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 307 SA-----ARAERGEGNLGFISAA-AKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMR 360

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           ++    I  G+     + +   L KG
Sbjct: 361 DAKITQIYEGTNQIQRMVMSRALLKG 386


>gi|134100118|ref|YP_001105779.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912741|emb|CAM02854.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 385

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 15/266 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  A+ ++ +   D  + L+G K W  +  +S  + ++A  E   G   +  
Sbjct: 129 LSEREAGSDAGAMKTRARLDGDH-WVLNGTKCWITNGGVSKWYTVMAVTEPDKGANGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                   G      + K+G + + TVEL F +    +  D  +          L  LD 
Sbjct: 188 FAVHADDPGFTVGPKEKKLGIKGSPTVELYFEDCT--IPADRIIGEPGTGFKTALRTLDH 245

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    + +A+     A+ Y + R   G  + D   ++  +AD+A+ I AA  + + 
Sbjct: 246 TRPTIGAQALGIAQGALDAALDYVKERKQFGKAISDFQGVQFMLADMAMKIEAARHMVYV 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 306 SA-----ARAERGEGNLGFISAA-AKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           ++    I  G+     + +   L KG
Sbjct: 360 DAKITQIYEGTNQIQRMVMSRALLKG 385


>gi|325847102|ref|ZP_08169928.1| putative butyryl-CoA dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481074|gb|EGC84119.1| putative butyryl-CoA dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 144

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ Y++ R   G  L      +  +A++A++I AA  L ++ A+  D  ++ S  A
Sbjct: 22  ALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARHLVYKAASLKDAGENYSVAA 81

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A++ A  T  +           A++ +GG GYI+E  + R  R++    I  G+   M
Sbjct: 82  AMAKLKASRTASYVAN-------RAVQILGGYGYIKEYDVERMMRDAKITEIYEGTSEVM 134

Query: 451 VLDV 454
           ++ V
Sbjct: 135 LMVV 138


>gi|289706031|ref|ZP_06502404.1| putative acyl-CoA dehydrogenase [Micrococcus luteus SK58]
 gi|289557233|gb|EFD50551.1| putative acyl-CoA dehydrogenase [Micrococcus luteus SK58]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++  +  D  Y L+G K F+S +  SD ++++ +        +   
Sbjct: 123 LTEPGAGSDAAALKTRAVRDGDH-YVLNGVKQFISGAGASDCYVVMCRTADTGARGISAV 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308
           ++   +P GL +   + K+G  +  T ++ F +              GF +    ++ G 
Sbjct: 182 VVHKDTP-GLSFGPNEKKMGWHTQPTRQVIFEDVRVPVADRLGEEGDGFRIAMKGLNGG- 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                    L+    S+ G   +L +A  Y + R   G  L  +  +   +AD+++ +  
Sbjct: 240 --------RLNIGACSIGGGLAALDKATRYLKERSAFGEPLATKQALVFELADMSVKLET 291

Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  +  R A++ D     +    A A+++A  + Y            A++  GG GY+ E
Sbjct: 292 AHTMLMRAADALDRNDPDTVRLCAMAKLVATESGYEAADT-------ALQLHGGYGYLHE 344

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + +  R+   + IL GS   M
Sbjct: 345 YGVEKLVRDLRVHRILEGSNEIM 367


>gi|33594105|ref|NP_881749.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis Tohama I]
 gi|33599745|ref|NP_887305.1| putative acyl-CoA dehyrdogenase [Bordetella bronchiseptica RB50]
 gi|33564179|emb|CAE43458.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis Tohama I]
 gi|33567342|emb|CAE31255.1| putative acyl-CoA dehyrdogenase [Bordetella bronchiseptica RB50]
 gi|332383521|gb|AEE68368.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis CS]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 23/259 (8%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           A    L+E+  G+D AAI +   +  DG + L G K W  +   S  +++ A+ +   G 
Sbjct: 122 ATSFALSERIAGSDAAAIEATATREGDG-WRLRGEKYWIGNGGASRYYVVFAKTDPAAGG 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDMK 313
             V   + D    G     L +K+G R   T  L+          +G+LN +      ++
Sbjct: 181 RGVSAFMVDKEQPGAEIDELSDKMGIRGTQTSNLKLDLVVPDSARVGELNRA------LR 234

Query: 314 I-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDIA 367
           + L  L+   + V+   + +A   +              QP+ +       +AD+A +I+
Sbjct: 235 LALQTLNVGRIMVAAQSLGVALGAYREAAGRAVARRAFGQPIGENQAIGFRLADMATEIS 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + +  A ++D  +  S   A A++ +        +++  V+   ++  GG GY + 
Sbjct: 295 AARMMLYEAARAYDAGQDVSNLGAMAKLFS-------SEVSHRVVDNTVQIWGGLGYCKP 347

Query: 428 RSIARHYRESPANSILLGS 446
               R YR+     I  GS
Sbjct: 348 TVAERLYRDQRILEIYEGS 366


>gi|302681023|ref|XP_003030193.1| hypothetical protein SCHCODRAFT_57896 [Schizophyllum commune H4-8]
 gi|300103884|gb|EFI95290.1| hypothetical protein SCHCODRAFT_57896 [Schizophyllum commune H4-8]
          Length = 392

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 24/251 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           + K  +    GLTE   G+D  ++ +  +++ DG + L+G K W  ++P++D FI+ A  
Sbjct: 126 LAKGELVGAFGLTEPNHGSDPGSMETTAEEV-DGGFILNGSKTWISNAPVADVFIIWANC 184

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             + ++  F+V + L+     GL    +KNKI  R++ T  +   +        L  + G
Sbjct: 185 KWDNKIRGFIVDKGLK-----GLSAPPIKNKIALRASLTGSIFMDSVRVGQDALLPKTKG 239

Query: 308 PVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                     L+SA   +S      +   L  A  YA  R      L    ++++ +AD 
Sbjct: 240 LGSPFSC---LNSARYGISWGVMGALEDCLIRAREYALERTQFKRPLASFQLVQKKLADA 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +IA     S ++    D  ++  E       M  + K   C  A A     ++ +GG+
Sbjct: 297 HTEIALGQLASLQVGRLKDAGQAAPE-------MISMVKRNNCGKALAHSRILLDILGGN 349

Query: 423 GYIEERSIARH 433
           G  +E  I RH
Sbjct: 350 GCTDEYHIGRH 360


>gi|149927378|ref|ZP_01915633.1| acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149823870|gb|EDM83095.1| acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 25/272 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           P   T   +G +G+TE   G+D+A + +   +  D  + ++G K F+++ +    I+LA 
Sbjct: 119 PRMVTGEIVGSIGMTEPGAGSDLAGMRTNAVRDGDE-WVINGSKTFITNGLHCGLIVLAA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +   G   +   L D S  G    +   K+G  SN T EL F N    L    N   G
Sbjct: 178 KTDTSKGAKGISLFLVDSSLPGFKKGKGIKKMGQHSNDTAELFFDN----LRVPANALLG 233

Query: 308 PVEDMKILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             E+ K  IYL   +          +V     ++A    Y  +R   G  +      +  
Sbjct: 234 --EENKGFIYLMQELPRERLGLGSQAVGACEGAMAITADYVTQRKAFGSTIAQFQNTRFK 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++   +    A   +    F      +EEA+  ++M+        ++   +  E ++ 
Sbjct: 292 MAELRAQLELTKAYLKQCEARFKLGAMTTEEASILKLMS-------TELQVKLTHECLQL 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY EE  I+R + ++   +I  G+   M
Sbjct: 345 FGGYGYTEEYPISRFFTDARVQTIYAGTSEIM 376


>gi|148657080|ref|YP_001277285.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569190|gb|ABQ91335.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 418

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 34/273 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-----SDAFIML-AQVE-- 250
           + +TE   G+D AAI +  +   DG  + L+G K F++  +     S  F+++ A V+  
Sbjct: 137 MAMTEPHCGSDTAAIRTTARLSEDGKEWILNGEKIFVTGGLMAAKESRGFVVVWATVDPS 196

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
            GR G  + P ++E G+P G+   +L++K G R + T  + F++    +  +LG   V  
Sbjct: 197 AGRAG--MKPFVVEAGTP-GMTVTKLEHKHGIRVSDTAAIVFNDCRIPYDNILGSPEVVK 253

Query: 307 GPVEDMKI---LIYLDSA--IMSVSGM---RVSLAEAIHYARRRHVSGGILID---QPVM 355
           G  E       +   D+   +++ S +   R +L     Y + R V     I    Q  +
Sbjct: 254 GDTEHKGFKGAMKTFDATRPLVAASALGIARAALEFTASYLKDRGVKVRYGIAPHLQTAV 313

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R +  + +   AA  L  +     D  +  + EA+ +++ A        ++A  V  +A
Sbjct: 314 ERDLIHMEMQHRAAWLLVLKAVTKMDAGEENALEASMSKVKA-------GQVATYVSQKA 366

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +E +G  GY  +  + +  R++  N I  G+G 
Sbjct: 367 VELLGPEGYSCKLLVEKWMRDARINDIYEGTGQ 399


>gi|323489164|ref|ZP_08094396.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323397051|gb|EGA89865.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 407

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 14/136 (10%)

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARIM 396
           A  R   G  L ++ V+K  IA+  ++I  A  L+   A+  D   AK+  +E A  ++ 
Sbjct: 282 ADSREAFGSSLAEKDVIKEIIAESRIEIEQARLLTLHAAHKIDTEGAKASRKEIAMIKVA 341

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P       ++A  VI  A++  GG+G  E+  +A HY  + A  ++ G     + DV  
Sbjct: 342 VP-------RVAQNVIDRAIQVFGGAGLTEDFPLAAHYANARALRLVDGPDQVHIRDVGR 394

Query: 457 LLEKGTNLFEQLFSTL 472
           L      L EQL ++L
Sbjct: 395 L-----ELSEQLKASL 405


>gi|251796776|ref|YP_003011507.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247544402|gb|ACT01421.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 374

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 41/263 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG--RVG-- 254
             LTE   G+D AAI +  ++  D  Y L+G K F+++   +  +++ A  +G  R G  
Sbjct: 123 FALTEPHAGSDAAAIRTSAERKGDH-YELNGSKLFITNAGAAGVYVVFAVTDGTKRAGGI 181

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG----DLNVST 306
             F+VP     G   GL   + + K+G   + T EL F        + LG       ++ 
Sbjct: 182 TAFIVP-----GDMEGLHIGKPERKMGLHGSNTCELHFEQLRIPAEYRLGREGEGFAIAK 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKR--AIADIA 363
           G          LD   + ++   + +AEA I   R R    G     P   R   +A++ 
Sbjct: 237 GS---------LDGGRIGIAAQALGIAEASIELLRDRF---GPPKGYPYTSRDTELAELL 284

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              AAA  L +R A+   E +  ++E++ A++ A  T       A AV   A+  +G  G
Sbjct: 285 ARTAAARLLVYRAASLRQEGRPCTKESSMAKMFASDT-------AVAVTGAAVRLLGEEG 337

Query: 424 YIEERSIARHYRESPANSILLGS 446
             +E    R +R++    I  G+
Sbjct: 338 LSKEHPAERLFRDAKVTQIYEGT 360


>gi|116787122|gb|ABK24383.1| unknown [Picea sitchensis]
          Length = 429

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 28/243 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++ +   K+  G + L G K W  +S  +D  ++ A+     ++  F+V
Sbjct: 162 LTEPNYGSDASSLNTIATKVEGG-WKLDGQKRWIGNSTFADILVVFARNITTNQINGFIV 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNR--SNATVELEFSNTFGFLLGDLNVSTG--PVEDMKI 314
            +    G+P GL   +++NKIG R   N  + L+     G  + D +   G    +D   
Sbjct: 221 RK----GTP-GLRVTKIENKIGLRCVQNGDILLK-----GVFVADEDRLPGIDSFQDTSK 270

Query: 315 LIYLDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           ++ +   ++S    G+ + + +  H Y + R   G  L    + +  +  +  +I A   
Sbjct: 271 VLAVSRIMVSWQPIGIAMGVYDMCHRYLQERKQFGVSLNSFQISQEKLIRMLGNIQAMNL 330

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +RL   +D+ K     A+       +TK W    A  V++   E +GG+G + +  +A
Sbjct: 331 MGWRLCKLYDDGKMTPGHAS-------LTKAWNTLKAREVVSLGRELLGGNGILTDFLVA 383

Query: 432 RHY 434
           + +
Sbjct: 384 KAF 386


>gi|146281001|ref|YP_001171154.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145569206|gb|ABP78312.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 385

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +L EA+ YA+ R   G ++    ++   +A++A ++ AA  L++R A           
Sbjct: 257 RRALEEAVRYAKERKQHGKLIAGHQLISAMLAEMATNVDAARLLTYRAAEMIGAGIPAEM 316

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           EAA A       KY+ C+ A  +  +A++  GG+G   +  + +  RE+
Sbjct: 317 EAAMA-------KYFACEAAVTIARQAVQIHGGAGVTTDFLVEKLAREA 358


>gi|73541524|ref|YP_296044.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72118937|gb|AAZ61200.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 394

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 107/272 (39%), Gaps = 25/272 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFI-MLA 247
           P     +   + ++E   G+D +   ++ ++  +G + +SG K W   +   D  I ML 
Sbjct: 126 PFIDGKIRFSVSISEPDAGSDASNTKTRARRDENGDWIVSGQKLWCSGAAAKDTVIAMLV 185

Query: 248 QVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLL 299
           + +     G +   L+P      S  GL   +L   +   +  T E+   E       LL
Sbjct: 186 RTDADNKHGGLSVLLIPN-----STPGLVINKLPT-LSRHATGTTEIFLDEVRVPADALL 239

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       +     L     A   V   + ++++A  YA  R   G  L D  V+K  +
Sbjct: 240 GEEGQGWEIITKHLELERCAVAAAYVGNAQTAVSKATQYAHERIQFGKQLWDFQVLKHML 299

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD   ++ AA  L +R A         S E + A++    T   C           M+ +
Sbjct: 300 ADRQTEVDAARLLCYRAAQMAAADVPCSREVSMAKLYGSETLKQCA-------LTGMQVL 352

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG   + E  + R+ RES  ++I  G G + +
Sbjct: 353 GGYANLPEADMERYLRESVQSTI--GGGTSQI 382


>gi|309811098|ref|ZP_07704896.1| acyl-CoA dehydrogenase family protein [Dermacoccus sp. Ellin185]
 gi|308435062|gb|EFP58896.1| acyl-CoA dehydrogenase family protein [Dermacoccus sp. Ellin185]
          Length = 427

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 41/281 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D   I +   K  D  Y L+G K F++S   ++  ++ A +E  +G   +
Sbjct: 157 MAITEPDTGSDSGNIRTTATKDGDE-YVLNGEKIFVTSGERAELVVVWATLERSLGKKAI 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----KI 314
              + + S  GL   RL++K+G R+        S+T  F+L D  V   P  D+    KI
Sbjct: 216 KSFVVERSNPGLKLVRLEHKLGIRA--------SDTAAFVLEDCRV---PANDLLGDPKI 264

Query: 315 ---------LIYLDSAIMSVSGMRVSLAEA-IHYARR--RHVSGGILIDQPVMKRAIADI 362
                    +   D+    V+ M V L  A + + R        G   D PV  +  A  
Sbjct: 265 RTEGGFGGAMQTFDNTRPLVAAMAVGLTRACLDFTRTALEKAGHGQDWDAPVAAQTYASA 324

Query: 363 AL-----DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            L     D  +A  L+ R A   D  K  S EA+ A+  A  T   C  +A     + +E
Sbjct: 325 RLVQMEADYESALLLTLRAAWMADNGKPNSMEASMAKAKAGRT---CVNVA----LQCVE 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +G  GY E   + +  R++    I  G+    +L V   L
Sbjct: 378 LVGVDGYAESELLEKWARDAKILDIFEGTQQIQLLVVARRL 418


>gi|326775304|ref|ZP_08234569.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655637|gb|EGE40483.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 380

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 106/257 (41%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  +++A+     G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAEDKGDH-WLLNGSKTFISNGIIADLVVVVAKTTAEGGAKGL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++ +    G    R  +KIG ++  T EL F++        L    G    + ++  L
Sbjct: 183 SLIVVERGAEGFERGRNLDKIGQKAQDTAELFFNDVRVPKENLLGTRDGAF--LHLMTNL 240

Query: 319 DSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               M ++   ++ AE +      Y + R   G  L     ++  IA++A + A   A  
Sbjct: 241 AQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAVTRAF- 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D       +     + A + K+W  ++   V    ++  GG GY+ E  +A+ 
Sbjct: 300 ------LDRCIVDHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEYRVAKA 353

Query: 434 YRESPANSILLGSGNAM 450
           + +    +I  G+   M
Sbjct: 354 FTDGRVQTIYGGTTEIM 370


>gi|295691002|ref|YP_003594695.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432905|gb|ADG12077.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 564

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 131/337 (38%), Gaps = 41/337 (12%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  G L + S  +  ++    T    + W PKI S E  PT                T
Sbjct: 252 AWIGVGSLATRSEIAGELILTGGTDAQKEYWLPKIASAEILPTAV-------------FT 298

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+ ++ ++ +   D  Y ++G+K W   +  +D   +L + E     +    +L
Sbjct: 299 EPNTGSDLGSLRTRAELKGD-QYVVTGNKTWITHAARADVMTLLVRTEPGTTDYRGLSML 357

Query: 263 EDGSPNGLCYQRLKNK---------IGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDM 312
               P G        +         IG R     EL F    GF +   N+  G P +  
Sbjct: 358 LAPKPRGTDEAPFPAEGMSGGEIQVIGYRGMKEYELGFD---GFTVPAENLLGGVPGQGF 414

Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K L+   +SA +  +   V +A+A     + YA  R   G  + + P +   +A +A +I
Sbjct: 415 KQLMATFESARIQTAARAVGVAQAALETGLGYALDRQQFGQAIFEFPRVANKLAMMAAEI 474

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L++  A   DE K    EA  A+++A    +            A++  GG+G+  
Sbjct: 475 MGVRQLTYYAARQKDEGKRCDLEAGMAKLIAARVAWAAAD-------NALQIHGGNGFAM 527

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           E + +R   ++   +I  G+G      +   L  G N
Sbjct: 528 EYAASRLLADARILNIFEGAGEIQAQVIARRLLDGGN 564


>gi|264676292|ref|YP_003276198.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262206804|gb|ACY30902.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 382

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 37/299 (12%)

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
           T A ++A   T R  + W P+  S E+                  LTE RGG+  A + +
Sbjct: 97  TDAVLIAGDETQR--EQWLPRCASGEW-------------LAAFALTEPRGGSHPADMRT 141

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR-VGCFLVPRLLEDGSPNGL 270
           +  +  D  Y ++G K F+S+     F+++     A+   R V  F+VPR L      G+
Sbjct: 142 RAVRDGDD-YLITGVKHFISNAAEARFMVVFAKTDAEAAARGVSAFIVPRDLP-----GI 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
                +  +G R     E+   +        L    +G    MK+L    LD A  S+  
Sbjct: 196 QVSSPEKLMGIRGGHAFEVSLDSVRVPAANRLGAEGSGFKTAMKVLDNSRLDVAATSLGI 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A  +A +R V G  +  +  ++  +AD+ L + AA AL+ +      + +  +
Sbjct: 256 AEAALKAAADWANQRLVGGEPIAVKQGIQFKLADMKLRLEAAWALTMQALALRQQGQPFT 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +++A A++ A        +M   V  EA++  GG GY  E  + R+ R++    I  GS
Sbjct: 316 QQSAMAKLFA-------SEMVGFVTDEALQIHGGYGYTREMPLERYVRDARILRIYEGS 367


>gi|149048722|gb|EDM01263.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c
           [Rattus norvegicus]
          Length = 623

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIK 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|149048724|gb|EDM01265.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e
           [Rattus norvegicus]
          Length = 496

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 57  LTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIK 116

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 117 DKMTAFIVERDF-GGITNG----KPEDKLGIRGSNTCEVHFENTRVPVENVLGE--VGGG 169

Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADI 362
               M IL      + SA   V+GM   L E    YA  R      L +  +++   A +
Sbjct: 170 FKVAMNILNSGRFSMGSA---VAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALM 226

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 227 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 279

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 280 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 311


>gi|319948249|ref|ZP_08022403.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319438081|gb|EFV93047.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 380

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 34/274 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---- 252
           + + ++E   G+D+AA+  + ++  D  + ++G K W  ++  +D  +++A+ +      
Sbjct: 121 LSISMSEPGAGSDVAALRCKAERDGDD-WVINGQKTWCSNAHFADRILLVARTDSSGKKH 179

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN----ATVELEFSNTFGFLLGDL-NVS 305
             +  F VP  +E     GL    ++   G   N      V L   +  G + G    + 
Sbjct: 180 EGITMFDVPADIE-----GLQITGIETMGGKEVNDLYFTDVRLPADSVIGEVGGGWAQLM 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           TG   +  IL     A M +   + +  + + + + R   G  +    V++  +AD+A +
Sbjct: 235 TGLNTERLIL-----AAMQLGVAQRAFDDCLTFIKEREQFGRPVGSFQVLRHRMADLATE 289

Query: 366 IAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           I A   L + +A   DEA   +    EA+ A++ A        +++  V  E M+ +GG 
Sbjct: 290 IEATRLLVYAVARKVDEADPTALFPREASMAKLKA-------SELSKRVTLECMQSMGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY  E  + R  R++  ++I  G+ N +  D++ 
Sbjct: 343 GYATEYGMERLVRQAVVSTIYGGT-NEVQRDIIG 375


>gi|312382269|gb|EFR27785.1| hypothetical protein AND_05111 [Anopheles darlingi]
          Length = 1875

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 36/279 (12%)

Query: 196  VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--- 250
            V     LTE   G+D  +I  +  K +DG  Y L+G K W  +  ++D   + AQ E   
Sbjct: 1447 VYAAFALTEPSSGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIADIMTVFAQTEVED 1506

Query: 251  -------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
                    +V  F+V R        G+     +NK+G + + T E+ F        N  G
Sbjct: 1507 PKTGQKKDKVTAFIVERGF-----GGVSSGPPENKMGIKCSNTAEVYFEDVKIPVENVLG 1561

Query: 297  FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                   V+   + + +  +   +A +S + MR  + +A  +A  R   G  +     ++
Sbjct: 1562 KEGDGFKVAMNILNNGRFGM---AATLSGT-MRACIQKAAEHATNRVQFGRKIETYGGIQ 1617

Query: 357  RAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A +A+      ++++ ++ + D        EAA +++ A  + ++ C        EA
Sbjct: 1618 EKLAKMAMHHYVTQSMAYMISGNMDTGSLDYHLEAAISKVFASESAWYVCD-------EA 1670

Query: 416  MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            ++ +GG G++++  + R  R+     I  G+ + + L V
Sbjct: 1671 IQILGGMGFMKDCGLERVMRDLRIFRIFEGTNDILRLFV 1709


>gi|221211964|ref|ZP_03584942.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221168049|gb|EEE00518.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 112/256 (43%), Gaps = 20/256 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ---VEGRVGCF 256
           L +TE   G+D   + +      D I    G  +  +  ++D +++  +   ++      
Sbjct: 129 LAITESAAGSDATGMRTTFTPDGDDIVVNGGKIFITNGDVADLYLLFGKWSTIDDAKAAI 188

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            V  +LE G+ +GL     ++K+G R+++T  L F    G  +   N+   P + ++IL 
Sbjct: 189 SV-LILEKGT-DGLRVLGTEHKMGTRASSTASLSFD---GCRVPRANLIGNPGDGLRILF 243

Query: 317 -YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ +  S++       R +  +A+ Y   R  SG  +++   ++  +AD+A ++    
Sbjct: 244 GSLNRSRPSIAAHALGIARAAFEDAVDYINERRQSGKRILEFQGIQFMLADMASELILCE 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L ++L    D       E  +  + A + K      A  +  +A++  GG GY  +  +
Sbjct: 304 SLLWQLGARIDAG-----EQDFG-VEASVLKQRASDAAMRITTDAVQLFGGYGYCNDYRV 357

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 358 ERLMRDAKITQIWEGT 373


>gi|167741753|ref|ZP_02414527.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP      +P G    R + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVP----TDTP-GFIVGRPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TRINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLADYEVERHYRDARITQIYEGT 365


>gi|157961996|ref|YP_001502030.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846996|gb|ABV87495.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 401

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 25/245 (10%)

Query: 223 DGIYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G Y L+G +++ +    ++  I+ A+  G VG   +   + DGS NG+    L      
Sbjct: 145 NGQYKLNGCYRYVVDGHSANFLIVAARTIGSVGEEGISLFVVDGSANGVQRNWLPTMDQT 204

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS---AIMSVSGMRVSLAEA 335
           R  A V   F N     G LLG+        +++ ++I L +   A   V G +V+L ++
Sbjct: 205 RKQAQVV--FENVIVDPGALLGEFEQGW---QNLSVIIDLATIAIAADQVGGAQVALDQS 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAY 392
           + Y ++R   G  +     +K   AD+ L   AA +  +    +A+ F     +  + A 
Sbjct: 260 VEYTKQRVQFGRTIASFQAIKHKAADMMLKAEAARSSIYYAACVADQFLNYHRQDTDGAP 319

Query: 393 ARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                P          I K +C           ++  GG G+ +E  I  +++ + +   
Sbjct: 320 CHTKNPFRRELTEVASIAKAYCSDAYFFNAGCGIQLHGGVGFTQEYDIQLYFKRAKSTET 379

Query: 443 LLGSG 447
            LG+G
Sbjct: 380 YLGNG 384


>gi|220914896|ref|YP_002490204.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
 gi|219952647|gb|ACL63037.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 383

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 32/273 (11%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ +       G++E  GG+D+A+  ++  +  D  + L+G K F ++  +D   + A 
Sbjct: 111 APLCRGDCIASFGVSEPHGGSDVASTRTRAVRDGDD-WILTGSKVFSTNAGTDLHGLSAV 169

Query: 249 V------EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           V      +G  G   F+VP     G+P G    +   K+G R   +VEL F      + G
Sbjct: 170 VAVTDPDKGAKGLSTFVVPV----GTP-GFRVGKAGRKVGWRIAPSVELFFDEC--RIPG 222

Query: 301 DLNVSTGPVEDMKIL-------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            L V        +IL       I + +A + +S  R +L  A  Y R R V G  + +  
Sbjct: 223 RLMVGAQGEGLRQILTTLSLGRILVAAAALGLS--RKALGLAARYGRDRRVGGRPIFENQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD    I AA  +    A   D  +         R+   +TK +  +MA  ++ 
Sbjct: 281 GLTFPLADAMTQIHAAELMVRNAACLADAGRP-------FRLETSMTKLFASEMAGEIVD 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            A++  GG G  E+  ++    E+    I+ G+
Sbjct: 334 LAVQVHGGYGIFEDYEVSGLMGEAKVLQIVEGT 366


>gi|197313734|ref|NP_861433.2| acyl-CoA dehydrogenase family member 9, mitochondrial [Rattus
           norvegicus]
 gi|171847104|gb|AAI62016.1| Acad9 protein [Rattus norvegicus]
          Length = 625

 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIK 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|212637617|ref|YP_002314142.1| crotonobetainyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212559101|gb|ACJ31555.1| Crotonobetaine reductase subunit II, FAD-binding [Shewanella
           piezotolerans WP3]
          Length = 378

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 20/258 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+ ++ +   K  DG   L+G K F++S     +I++   +      +    
Sbjct: 123 ITEPSAGSDVGSLLTT-YKRRDGKVYLTGSKCFITSAAGTPYIVVMAKDAESEKPIFTEW 181

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314
             D S   +   +L  K+G + ++  EL+F       S+ FG             +  + 
Sbjct: 182 FIDMSKPSIKMSKLP-KLGLKMDSCCELQFDEFELEESDMFGIEGNGFMRVKEEFDSERF 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +
Sbjct: 241 LV----ALTNYGAAYCAFEDAAKYANQRVQFGEAIGRFQLIQDKFAHMAIKLNSMKNMVY 296

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D     S ++A       + K++C      VI  AM+ +GG     E  I+R +
Sbjct: 297 EAAWKCDNGTMTSGDSA-------MCKFYCANAGFEVIDSAMQVLGGYAIAGEHRISRMW 349

Query: 435 RESPANSILLGSGNAMVL 452
           R+   + +  GS    +L
Sbjct: 350 RDIRVDRVSGGSDEMQIL 367


>gi|119899371|ref|YP_934584.1| acyl-coa dehydrogenase [Azoarcus sp. BH72]
 gi|119671784|emb|CAL95698.1| probable acyl-coa dehydrogenase [Azoarcus sp. BH72]
          Length = 390

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 25/259 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGGDADTLVVYAKTDINAGPKGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVEDMK 313
              + +    G  +    +K+G R         SNTF     D+     NV  G     +
Sbjct: 187 TAFIIEKGMKGFSHGTHLDKLGMRG--------SNTFPLFFDDVEVPEENVLGGVGNGAR 238

Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L+  LD     + G     M   +   + Y   R   G  + +  +M+  +AD+     
Sbjct: 239 VLMSGLDYERAVLCGGPLGIMAACMDVVVPYLHERKQFGQSIGEFQLMQGKLADMYSTWM 298

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A  + +  + D    R++ A   R  A     +  + A  +  EA++ +GG GY  E
Sbjct: 299 ATRAYVYAVGQACD----RTDHARTLRKDAAGAILYSAEKATWMAGEAIQTLGGVGYTNE 354

Query: 428 RSIARHYRESPANSILLGS 446
            S  R +R++    I  G+
Sbjct: 355 YSTGRLWRDAKLYEIGAGT 373


>gi|39942676|ref|XP_360875.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145010043|gb|EDJ94699.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 540

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 17/265 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G  
Sbjct: 264 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWCDYFTTAVRTGGPGMG 323

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            V  LL +    G+  +R+  + G  S+ T  + F +       LLG  N     +    
Sbjct: 324 GVSLLLIERDFGGVTTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLLGKENKGFPCIMTNF 382

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA---- 369
               +   I  V   RV   E++ YA +R   G  LI+ PV++  +A +A  I A     
Sbjct: 383 NHERIGIIIQCVRFSRVCFEESVKYANKRRTFGKRLIEHPVIRYKLAHMARQIEATYNWL 442

Query: 370 TALSFRLANSFDEAKSR---SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ ++     D+ ++        A  +  A +T  +C + A  +        GG G   
Sbjct: 443 ESVVYQ-CEKMDDTQAMMLLGGPIAGLKAQATVTFEFCAREASQIFGGLSYSRGGQG--- 498

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
              + R YR+  A +I  GS   M+
Sbjct: 499 -AKVERLYRDVRAYAIPGGSEEIML 522


>gi|295396699|ref|ZP_06806845.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970445|gb|EFG46374.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 17/264 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   +   IG  GLTE   G++ A ++++  +  +G + L G K F+++   +D  ++ A
Sbjct: 110 PRAASGEVIGAFGLTEPGAGSNPAEMSTKAVRTENG-WHLKGTKHFITNAGFADFVVVYA 168

Query: 248 QVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNV 304
             +   G   +   L D +   G+     +  +G R +   E+ F        LLG+   
Sbjct: 169 ITDPEAGHRGISAFLVDTAKVEGIVVGGHEKTMGLRGSPVYEISFDCELPADALLGEEG- 227

Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    MK+L    ++ A MS+   R ++  A+ +++ RH++G  +     +   +ADI
Sbjct: 228 -QGFKTAMKVLDRGRIEVAAMSIGISRKAMEHAVAWSKTRHINGKPIAALQAIAFKLADI 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                 A  ++   A+S D  +  + ++A A+++A        + A  +  EA++  GG 
Sbjct: 287 HARYQQAFLVTMDAAHSRDTGEDFTIKSATAKLVA-------SEAAAFITDEALQIHGGY 339

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  +  + R+ R+     I  GS
Sbjct: 340 GFTRDFPLERYARDVRIFRIYEGS 363


>gi|322648387|gb|EFY44842.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
          Length = 316

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  +Y L+G K F++S     +I++   +G      V   
Sbjct: 60  ITEPGAGSDVGSLKTTYTRKNGKVY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 118

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  +
Sbjct: 119 WFVDMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 177

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +     
Sbjct: 178 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS----- 228

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             + N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R 
Sbjct: 229 --MKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRF 286

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 287 WRDLRVDRVSGGSDEMQIL 305


>gi|163858099|ref|YP_001632397.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261827|emb|CAP44129.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 27/266 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGRV 253
           + ++E   G+D+  I  + +   D  Y L+G K W  +   +D  I+LA+      +G+ 
Sbjct: 122 IAISEPNHGSDVGGIEFKAEDKGDH-YLLNGSKLWITNGHYADYAIVLARTFSPSCDGKS 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F++ R     +P      RL +K+  R++ T EL F++       LLG     T   E
Sbjct: 181 SIFVIDRA---ETP---FDSRLVDKMVLRASGTSELTFADVKVPKSALLG--TEGTALKE 232

Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +K L +  L+ A+ +V   + +L  ++ YA+ R   G  + +  ++++ I D+ + + +
Sbjct: 233 MLKGLNHGRLNIAMGAVGAAQAALDMSVEYAKTRKQFGRPIGEFQLIQKHIVDMLIQVES 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+++ A +        +    AR+   I K    + A  V   A+   GG GY  E 
Sbjct: 293 ARGLAYKAAAA-------VKAGKPARVECSIAKLHAAEAAHNVARTAIAVHGGLGYSTEY 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454
            + R +R++    I  G+     L V
Sbjct: 346 GLERIFRDTSGGVIPEGTAEVQTLIV 371


>gi|294895324|ref|XP_002775135.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239881088|gb|EER06951.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 664

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 23/300 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A I    +K S G  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 16  ICLAITEPTAGSDVANIRCSAKKSSCGKYYIVNGEKKWITNGIWADYFTVAVRTGGPGMD 75

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +  LL + +  G+  +R+K   G  S+ T  + F +       L+G  N      +  K
Sbjct: 76  GISLLLIEKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKVPIENLIGKEN------KGFK 128

Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +++      L    ++    RV   EA+ +A +R   G  L+  PV++  + ++A  I 
Sbjct: 129 CIMHNFNHERLALCALTNRFARVCYEEALKHANKRKTFGKNLVQHPVIRFKLGEMARQIE 188

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY--- 424
           A  A   ++A                 + A + K  C K+      E+ +  GG  Y   
Sbjct: 189 ATHAWVEQVAYQVGTMHPLEANMKLGGVTA-LLKVQCTKVFEYCARESAQIFGGLSYSRG 247

Query: 425 -IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
            + E+ + R  RE  A ++  GS   M+   +  + K   + + L    EQ+  ++ K++
Sbjct: 248 GVGEK-VERLNREVRAMAVPGGSEEIMLDLGVKQMSKLAEMAKVLVEQAEQENAANKKQM 306


>gi|162450269|ref|YP_001612636.1| putative Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161160851|emb|CAN92156.1| putative Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 417

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 35/253 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE------GR-- 252
           LTE   G+D+A++ ++ ++  DG + L G K  +S+ P++   ++ A+        GR  
Sbjct: 141 LTEPEAGSDVASLRTEARREGDG-WVLDGEKVLISNVPLAHHLVVFARTGAPPRDGGRAA 199

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           +  FLV     D    G+  + L     + IG        +  S   G + G   ++   
Sbjct: 200 ITAFLV-----DSGAEGVASEPLPMSVPHPIGRLRFERCRVPDSARLGEVGGGFKLAMQT 254

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++  +I +   +  M+   +R    EAI +  RR   G  L +Q +++  +A++A ++ A
Sbjct: 255 LDAFRISVGAAANGMAARALR----EAIAHVTRRRQFGAPLSEQQMVRAYLAEMATELDA 310

Query: 369 ATALSFRLANSFDEAKSR-----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           A  L  R A+  D A +      S EAA A       K +  + A  +I  A++  GG G
Sbjct: 311 ARLLVARAAHKRDTAAAGAAARVSTEAAMA-------KMFATEAAQRIIDRAVQLHGGMG 363

Query: 424 YIEERSIARHYRE 436
            IE   + R YRE
Sbjct: 364 VIEGTEVERLYRE 376


>gi|47087644|ref|NP_998175.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           2 [Danio rerio]
 gi|28277846|gb|AAH45911.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 163 VTEPGAGSDVAGIKTRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 221

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 222 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 273

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 274 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 334 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 386

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 387 EYPVEKLMRDAKIYQIYEGT 406


>gi|257462314|ref|ZP_05626729.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           D12]
 gi|317059980|ref|ZP_07924465.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313685656|gb|EFS22491.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 378

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 34/270 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI----MLAQVEGRVGCFL 257
           LTE   G+D  A  +   K  D  Y L+G K F+++    AF     M  + +G  G  +
Sbjct: 123 LTEPGAGSDAGAGKTTAVKDGDD-YILNGRKCFITNAEVAAFYCITAMTDKSKGLKGMSM 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
              L+E G+P GL     +NK+G R+        SNT   +L D  V    +     E  
Sbjct: 182 F--LVEKGTP-GLSTGNHENKMGIRT--------SNTADVVLEDCRVPASALVGKEGEGF 230

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            I +  LD A   +  +   +A     EA+ Y + R   G  ++    ++  IAD+ +  
Sbjct: 231 AIAMKTLDQARAWMGCIATGIAQRGIREAVAYGKERIQFGKPVLKNQGLQFKIADMEIKT 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +        D     ++E+A       I K +   ++  V +EA++  GG GY  
Sbjct: 291 ETARQMVAHALTKMDLGLPYAKESA-------IAKCYAGDISMEVSSEAIQVFGGYGYSR 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E  + +  R++    I  G+     + V N
Sbjct: 344 EYPVEKLIRDAKIFQIFEGTNEIQRIVVAN 373


>gi|295135761|ref|YP_003586437.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294983776|gb|ADF54241.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 380

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 42/264 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVG 254
           L+E   G+D  A + +   I  G  Y L+G K W  +   +D ++++AQ +       + 
Sbjct: 125 LSEPEAGSD--ATSQRTTAIDKGDYYLLNGTKNWITNGGTADYYLVIAQTDREKKHNGIN 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302
            F+V +  E     G      +NK+G R + T  L F++             FGF     
Sbjct: 183 AFIVEKGWE-----GFEVGPKENKLGIRGSDTHSLNFNDVKVPKENRIGEDGFGFKFAMK 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +S G        I + +  + ++     LA    Y+++R   G  + +   +   +AD+
Sbjct: 238 TLSGGR-------IGIAAQALGIASGAFELAR--DYSKQRKAFGTEISNHQAIAFKLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I ++  L  + A   D+ ++     A A++ A  T       A  V  EA++  GG+
Sbjct: 289 YTAIESSRHLVMKAAWDKDQKQNYDLSGAMAKLSASQT-------AMDVTIEAVQIHGGN 341

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+++E  + R  R++    I  G+
Sbjct: 342 GFVKEYHVERLMRDAKITQIYEGT 365


>gi|325088078|gb|EGC41388.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 466

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 27/281 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+A I +  ++ S   Y ++G K ++++ +   +       G  G   + 
Sbjct: 187 LGITEPDAGSDVANIRTTAKR-SGNKYIVNGAKKWITNGIWAHYCTAEVRTGGKGRGGIS 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFG-------FLLGDLNVST 306
            L+   +  G+  +R++N   N S +T      VE+   N  G       +++ + N   
Sbjct: 246 LLIIPLAAKGVTRRRMENSGVNASGSTFIEFDDVEVPAENLIGIENDGFRYIMSNFNPER 305

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                    + L S+ + +S  RV + +A +YA  R   G  LI   +++   + +   I
Sbjct: 306 ---------LGLASSCVRLS--RVCVEDAYNYAITRETFGQPLIANQIIRAKFSKLGRLI 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               A   +LA +   A    +EA    + A + K    +    V  EA + +GG+GY +
Sbjct: 355 EPCQAFLEQLAYTVQVAAKTGQEANVGGMTA-LLKVMSTRCLEKVCREAQQVMGGAGYDK 413

Query: 427 ERSIARHYRESPANSI-LLGSGNAMVLDVLNLLEKGTNLFE 466
               AR  + S    + ++G G+  +L  L + E+  NL +
Sbjct: 414 SGRGARIEQISRDVRVYVVGGGSEEILSDLAVREEIKNLHD 454


>gi|226365576|ref|YP_002783359.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244066|dbj|BAH54414.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 380

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 33/271 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252
           + ++E   G+D+  ++++ +K +DG + ++G K W  ++   D  +++A+    +G+   
Sbjct: 124 ISMSEPEAGSDVGNLSTRAEKTADG-WVINGQKTWCSNAHFCDNILLVARTGRGDGKHEG 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F VP         GL    +    G   N   +L F++       ++G+  V  G  
Sbjct: 183 LTMFHVP-----ADTTGLKISGIDTMGGKEVN---DLYFTDCVLPEDAVVGE--VGNGWR 232

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M  L +  L  A M +   + + A+ + +  +R   G  +     ++  IAD+A +I 
Sbjct: 233 QLMTGLNFERLILAAMMLGTAQRAFADTLDFVTQRKQFGRPVGSFQALRHRIADLATEIE 292

Query: 368 AATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
               L + +A   D    K  + EA+ A++    T       A  V  E M+ +GG GY 
Sbjct: 293 CCKLLVYSVAKDVDANPGKMLAREASMAKLKVTET-------AKKVALEGMQMMGGYGYA 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E  + +H R +  +SI  G+ N +  D++ 
Sbjct: 346 TEFDMEKHVRSTIVSSIYGGT-NEIQRDIIG 375


>gi|300712591|ref|YP_003738404.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126275|gb|ADJ16613.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 387

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 121/310 (39%), Gaps = 49/310 (15%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALM------TTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           LM +LEAG     S+ S     +M       +    K W P              M K  
Sbjct: 77  LMQELEAGDSGVRSMASVQGALVMYPIYAFGSEEQKKRWLPS-------------MGKGD 123

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ---VE 250
              G  LTE   G+D  ++ +Q ++  DG  + L+G K W  +SP++D  ++ A+    E
Sbjct: 124 AIGGFALTEPEHGSDAGSMETQAER--DGEEFVLNGEKRWCTNSPIADVLVVWARDTSSE 181

Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           G  V  FLV     +   +GL    +  K+  R++++ E       G  +   NV  G V
Sbjct: 182 GEPVRGFLV-----ETDRDGLDIDTIDGKLSLRASSSGEFTMD---GVRIPKENVLPG-V 232

Query: 310 EDMK------ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             MK             A  +V   R    EA  YA  R   G  +    + +  +A++A
Sbjct: 233 SGMKGPLSCLTQARYGIAWGAVGAARDCFEEARTYATDREQFGKPIGGFQLQQEKLAEMA 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I  +  L  RLA   +  + R +  + A       K    +MA      A E +GG+G
Sbjct: 293 TQITTSQLLVHRLAELKERGELRPQHVSMA-------KRNNVEMARDQSRIAREMLGGNG 345

Query: 424 YIEERSIARH 433
              E S  RH
Sbjct: 346 ITAEYSPIRH 355


>gi|182889908|gb|AAI65798.1| Acadm protein [Danio rerio]
          Length = 424

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 163 VTEPGAGSDVAGIKTRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 221

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 222 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 273

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 274 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 334 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 386

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 387 EYPVEKLMRDAKIYQIYEGT 406


>gi|297583445|ref|YP_003699225.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297141902|gb|ADH98659.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 592

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 129/316 (40%), Gaps = 37/316 (11%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDI 211
           S S+T  + V + + P V+       F  E       P   T   I    LTE   G+D 
Sbjct: 105 SFSLTHGAHVGIGSLPIVY-------FGTEEQKKQYLPDLATGERIAAYALTEPTSGSDA 157

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPN 268
            +  +  +   +G  Y L+G K W  ++  +D F++ A+++G +   F+V +        
Sbjct: 158 LSAKATAKLNEEGTHYILNGEKQWITNAGFADVFVVYAKIDGEQFSAFIVEK-----DHE 212

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIM 323
           G+     + K+G + ++T  L   +       LLG+     G V    IL        + 
Sbjct: 213 GVSVGPEEKKMGIKGSSTRTLILEDAVVPKENLLGE--AGRGHVIAFNILNLGRFKLGVG 270

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NS 379
            V G + ++  +  YA  R      +    ++++ +A++A    A  +  +R A      
Sbjct: 271 CVGGAKRAVEISAAYANERKQFNMPISKFTLIQKKLAEMAAKTYALESTIYRTAGLIDKG 330

Query: 380 FDEAKSRSEE---------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           FDE     ++         A YA +   + K++  +    ++ E ++  GG+G++ E  I
Sbjct: 331 FDELSDEQKKDGKLVGKAIAEYA-VECSLNKFFGSEALDEIVDEGVQIHGGNGFMMEYEI 389

Query: 431 ARHYRESPANSILLGS 446
              YR S  N I  G+
Sbjct: 390 ENMYRNSRINRIFEGT 405


>gi|120402903|ref|YP_952732.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955721|gb|ABM12726.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 408

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIM----LAQVEGR-- 252
           + +TE   G+D AA+++    + DG  Y ++G K F+++    + I+    L + +GR  
Sbjct: 138 MAITEPSFGSDSAAVSTTA--VLDGDEYVINGEKIFVTAGSRASHIVVWATLDKSKGRAA 195

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD--LNVSTG 307
           +  F+VPR        G+  +RL++K+G +++ T  + F N       LLGD  ++V  G
Sbjct: 196 IKSFIVPR-----EHPGVTVERLEHKLGIKASDTAVIRFDNARIPKDNLLGDPEIHVEKG 250

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQPVMKRAIAD--- 361
               M+     D+    V+ M V +A A +   R+     GI I  D+P   ++ A    
Sbjct: 251 FAGVMETF---DNTRPIVAAMAVGVARAALEDLRKILTDAGIEISYDKPAHAQSAAAAEF 307

Query: 362 --IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  +  +   L+ R A   D     S+EA+  +  A        ++A  +  +A+E  
Sbjct: 308 LRMEAEWESGYLLTVRSAWQADNRIPNSKEASMGKAKA-------ARVASDITLKAVEMA 360

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G +GY EE  + +  R+S    I  G+
Sbjct: 361 GTTGYSEETLLEKWARDSKILDIFEGT 387


>gi|194751744|ref|XP_001958185.1| GF23652 [Drosophila ananassae]
 gi|190625467|gb|EDV40991.1| GF23652 [Drosophila ananassae]
          Length = 527

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 125/313 (39%), Gaps = 49/313 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + PK+ + +             V     LTE   G+D  +I  +  K 
Sbjct: 62  ILLYGTPEQKAKYLPKVAAEQ-------------VYAAFALTEPSSGSDAGSIRCRAVKT 108

Query: 222 SDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
            D   Y L+G K W  +  +++   + AQ E           +V  F+V R     S  G
Sbjct: 109 PDNKYYVLNGSKIWISNGGIAEILTVFAQTEVVDPKTGQKKDKVTAFIVER-----SFGG 163

Query: 270 LCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +     + K+G +++ T E+ F        N  G       V+   + + +  +    A 
Sbjct: 164 VTSGPPEKKMGIKASNTTEVYFEDVKIPVENVLGKEGDGFKVAMNILNNGRFGM---GAT 220

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S + M+  +  A  +A  R   G  L +   ++  IA + +   A  +++F +A + D 
Sbjct: 221 LSGT-MKKCIELATAHATNRVQFGQHLKNYKGIQDKIAQMNILQYATESMAFAIAQNMDA 279

Query: 383 AKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EAA ++I A    ++ C        EA++ +GG GY+ E  + R  R+     
Sbjct: 280 GSQDYHLEAAISKIYASECAWYVCD-------EAIQILGGMGYMVETGLERVLRDLRIFR 332

Query: 442 ILLGSGNAMVLDV 454
           I  G+ + + L V
Sbjct: 333 IFEGTNDILRLFV 345


>gi|119962188|ref|YP_948732.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119949047|gb|ABM07958.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 387

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 29/305 (9%)

Query: 136 RAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
           R A  Y +A  +LEAG   S   T  S+   +    +HK W  +    ++ P     M  
Sbjct: 72  RTAVEYGLAAMELEAGD--SGIRTFVSVQGSLAMTAIHK-WGSEAQKEQWLPR----MAA 124

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +     LTE   G+D +++T+  ++ +DG       +W   + ++D  ++ A+ E  +
Sbjct: 125 GELIGCFALTEPTAGSDPSSMTTFARETADGWVLEGAKRWIGLASIADVMVVWAKTEDGI 184

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP        +G+    ++ K+  R++   +++F    G  LG   V  G +    
Sbjct: 185 RGFLVP-----AGTSGVTATPIEPKLSMRASIQCDVKFD---GVRLGPEAVLPGAMGLKG 236

Query: 314 ILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               L+ A   ++       R S   A+ YA  R   G  L    + +  + ++ ++I  
Sbjct: 237 PFSCLNEARYGIAWGAMGAARDSYEAALEYAGNRLQFGRPLAGYQLTQEKLVNMLVEIQK 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            T L+  L    D    + ++ +  ++          + A  +  EA   +GG+G   + 
Sbjct: 297 GTMLALHLGRLKDAGHLQPQQISLGKLN-------NVREAIKIAREARTILGGNGVTLDY 349

Query: 429 SIARH 433
           S  RH
Sbjct: 350 SPLRH 354


>gi|304313252|ref|YP_003812850.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798985|emb|CBL47223.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 383

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 50/325 (15%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDW-APKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKR 206
           +++  +  A++ AL T+  VH D  AP IF    +   +A  P   +  A+G + +TE  
Sbjct: 73  IIAEELGRANLGALCTSVSVHSDIVAPYIFHLGTEAQKQAWLPKMVSGEAVGAIAMTEPG 132

Query: 207 GGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+  + +    + DG  Y ++G K F+++    D  ++ A+ +   G   V     D
Sbjct: 133 AGSDLQGMRTTA--LLDGNQYVINGQKTFITNGQHCDLVVLAAKTDPSAGARGVTLFTVD 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVE 310
            S  G    R   K+G  S  T E+   N               F  L+ +L     P E
Sbjct: 191 CSLPGFNRGRNLEKMGLHSGDTSEMFLDNLRVDEDQVLGGVGRGFANLMNEL-----PRE 245

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALD 365
            + + I    AI +  GM  + A   +Y + R         QP+      +  +A++   
Sbjct: 246 RLILGI---GAIGACDGMMEATA---NYVKERRA-----FSQPISAFQNTRFKMAELKTQ 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    A        ++  +  + EA+ A++          ++   V  E ++  GG GY+
Sbjct: 295 LEVNRAFIQVCTEKYNRGQLSATEASMAKLST-------TELQGKVADECLQLFGGYGYM 347

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
           +E  +AR Y ++    I  G+   M
Sbjct: 348 QEYPLARAYVDARIQRIYGGTSEIM 372


>gi|291453688|ref|ZP_06593078.1| fatty acid acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291356637|gb|EFE83539.1| fatty acid acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 119 PLAKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + +    G+ +   + K+G + + T E+ F N    +  D  +    
Sbjct: 178 TDPEKRSKGISAFVVEKGDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 236 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   E           K +    A  +  +A++ +G
Sbjct: 293 DMAMKLEAARQLTYAAA-----AKSERVENDLT-FFGAAAKCYASDAAMEITTDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 347 GYGYTRDYPVERMMRDAKITQIYEGT 372


>gi|83770237|dbj|BAE60370.1| unnamed protein product [Aspergillus oryzae]
          Length = 524

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +   K  DG  Y ++G  KW  +   +D F++  + E      L
Sbjct: 257 LAITEAFAGSDVAGLRTTATKTPDGKHYIINGTKKWITNGMFADYFVVGCRTEKGFSVIL 316

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR        G+  + +K      +  T  ++F N        + V     E+ K  I 
Sbjct: 317 VPR------GEGVETKLIKTSYST-AAGTAYIQFENV------KVPVENLLGEEHKGFIV 363

Query: 318 LDSA------IMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S       +M+   +R+++    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 364 IMSNFNHERFMMACGTIRMAMTVVEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 423

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      +  E+A +      + K    + A  +  +A    GG G 
Sbjct: 424 NQAWLESIAYQMCNM-----TYKEQATHLGGPIGLLKSHATRAAQEIAEQATNIFGGRGL 478

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 479 TQTGMGKVIEMFHRTYKFDAILGGT 503


>gi|284167414|ref|YP_003405692.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017069|gb|ADB63019.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 386

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 37/243 (15%)

Query: 222 SDGIYCLSGHKWF-LSSPMSDAFIMLAQ-----VEGR-VGCFLVPRLLEDGSPNGLCYQR 274
           ++G Y ++G K F  ++ ++D  +++A+      EG  V  F+ P + +     G  + R
Sbjct: 148 TEGGYRITGEKSFGTNAGVADVHLVVARKRPAPAEGHGVSVFIAPGVDD---REGFTFDR 204

Query: 275 LKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM--- 328
            +  +G R + T +  F + F     LLG++             I + +  M+ +G+   
Sbjct: 205 AEF-MGMRGHVTGDSTFESVFVDESALLGEIG--------HGFRIAMGTIDMARTGLGAI 255

Query: 329 -----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R S  EA+ YA  R   G  + +   ++  IAD+   + +A  L +  A +  + 
Sbjct: 256 GTGIARASFDEAVEYAGGREQGGSPVGEYQAVQVLIADMDAQLDSARHLVYDSAAAIADG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + +++        +KY   + A  V   AM+  GG+GY  +  + R+YR++   SI+
Sbjct: 316 NGDTRKSSK-------SKYVASEAAEFVTRNAMQIHGGNGYRTDLPLERYYRDAKILSII 368

Query: 444 LGS 446
            G+
Sbjct: 369 GGT 371


>gi|197122848|ref|YP_002134799.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172697|gb|ACG73670.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 648

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+D A + +  ++  DG  Y L+G K W  +  +++  +++A+      +  
Sbjct: 170 FALTEANVGSDPARLATTAERSPDGTHYVLNGSKLWCTNGTLAELLVVMARDPKTDAISA 229

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+V    E   P      R +  +G R+ A   L F++     +   N+       +KI 
Sbjct: 230 FVV----ETAWPGVEVTHRCRF-MGLRAIANAALRFTDV---KVPAENLIGKEGRGLKIA 281

Query: 315 LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L++  +S+      G++ +LA +  +A  R   G  +     +   +AD+A    A 
Sbjct: 282 LTTLNTGRLSLPAAVSGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAM 341

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A+S       D A+S ++   Y  R+ A   K W    A  +I E M+  GG GY  ER
Sbjct: 342 EAVS-------DLAQSLADHEGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETER 394

Query: 429 SIA----------RHYRESPANSILLGSGNAMVL 452
           S+A          R  R++  N I  GS   M L
Sbjct: 395 SLAARGETPVGVERWMRDARINLIFEGSSEIMHL 428


>gi|124009212|ref|ZP_01693893.1| acyl-CoA dehydrogenase, very-long-chain specific [Microscilla
           marina ATCC 23134]
 gi|123985197|gb|EAY25131.1| acyl-CoA dehydrogenase, very-long-chain specific [Microscilla
           marina ATCC 23134]
          Length = 601

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 46/275 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  +   +D FI+ A+++   ++  F+
Sbjct: 152 LTEPDAGSDANSGKTKAELTEDGKHYIINGQKMWITNGGFADIFIVFAKIDDDKKLTAFI 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           + +        G+     + K+G + + T ++ F+        D  V   P+E+M     
Sbjct: 212 IEKDF-----GGITMNAPEAKMGIKGSDTRQVFFN--------DCKV---PIENMLSTRE 255

Query: 313 ---KILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              KI + + +         +  G + +L  +I YA  R   G  + +   +K  +A  A
Sbjct: 256 NGFKIAVNILNIGRIKLCASTHGGAKAALNHSIGYANERKQFGTSIANFGAIKHKLAQQA 315

Query: 364 LDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           + + A  +  +R            +AN   EA+++ +      I   + K +  +    V
Sbjct: 316 VRLYATESAMYRAGQNIDDSIAAMIANGTPEAEAKLKSFEQFAIECALLKVFGSETIDYV 375

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E ++  GG GY  +    R YR+S  N I  G+
Sbjct: 376 SDEMVQIYGGMGYSADAPADRCYRDSRINRIFEGT 410


>gi|32469593|sp|Q8JZN5|ACAD9_MOUSE RecName: Full=Acyl-CoA dehydrogenase family member 9,
           mitochondrial; Short=ACAD-9; Flags: Precursor
 gi|21410394|gb|AAH31137.1| Acad9 protein [Mus musculus]
 gi|21595209|gb|AAH32213.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Mus musculus]
 gi|23958795|gb|AAH33277.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Mus musculus]
          Length = 625

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|47085823|ref|NP_998254.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           1 [Danio rerio]
 gi|42542450|gb|AAH66533.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 163 VTEPGAGSDVAGIKTRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 221

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 222 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 273

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 274 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 334 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 386

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 387 EYPVEKLMRDAKIYQIYEGT 406


>gi|307178292|gb|EFN67064.1| Glutaryl-CoA dehydrogenase, mitochondrial [Camponotus floridanus]
          Length = 370

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 16/239 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D+ ++ ++    SD   Y L+G K W  ++P++D  I+ A+ +  +   F
Sbjct: 111 FGLTEPNHGSDVESMETRATYDSDKKTYKLNGSKTWITNAPIADILIVWAKCDDNQFRGF 170

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKI 314
           +V R     + + L   +++ K+  R++ T  +   N        LNV    GP   +  
Sbjct: 171 IVDR---KAAGDRLSTPKIEGKLSLRTSITGMILMDNVIVPEENVLNVQGLKGPFSCLNN 227

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             Y   A  S+      L  A  Y   R      L    ++++ +AD+  DIA       
Sbjct: 228 AKY-GIAWGSLGAAETCLKIARSYTLERRQFNKPLAANQLIQKKLADMISDIAIGLQACL 286

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           R+    DE ++  E       M  + K      A  +   A + +GG+G  +E  + RH
Sbjct: 287 RIGRLIDENRAVPE-------MISVIKRNSSGKALEIARAARDMLGGNGISDEYHVIRH 338


>gi|288919069|ref|ZP_06413409.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349509|gb|EFC83746.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
           + LTE  GG+D+ A+ +  +   DG Y ++G K W  ++  S    +L + +        
Sbjct: 120 MALTEPGGGSDLQAMRTVARADGDG-YLINGSKTWITNARRSGLVALLCRTDPAATPAHR 178

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +   LV R+       G    R   K+G +   + EL F +       LLG +    G 
Sbjct: 179 GMSILLVERV------EGYTVSRDLPKLGYKGVESCELVFDDARVPATALLGGVE-GRGF 231

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + M  L    +  A  +    R +  +A+ YA+ R   G  +     +   +AD+   I
Sbjct: 232 TQMMTGLEIGRIQVAARATGVARAAFDDALRYAQERESFGQPIWRHQSIGNYLADMGTKI 291

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A   D  +    EA  A++ A  T       A  V   A+   GG GY  
Sbjct: 292 TAARQLLLYAARRHDSGERCDMEAGMAKLFASET-------AMEVALNAVRIHGGYGYST 344

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 345 EFDVERYFRDAPL--MIVGEGT 364


>gi|242777315|ref|XP_002479009.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722628|gb|EED22046.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 400

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 22/253 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251
            G+TE   G D   + +   K SD  Y +SG K W   + ++   I+LA+        + 
Sbjct: 125 FGVTEPNTGLDTLRLKTTATKKSDNTYLVSGQKIWITCAQVASVMILLARTTPLEETQKP 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G  +    L+  +P GL  +++K K+G R+    E+ F + +  L   L    G   D
Sbjct: 185 TEGLSMFAINLDRTNP-GLELKKIK-KMGGRAVDANEV-FFDKYEILADTL---IGKEND 238

Query: 312 -MKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +I+++ +++    ++G  + L      +A HYA  R V G  +     +   +AD  +
Sbjct: 239 GFRIILHGMNAERCLLAGEALGLGYAALEKASHYANERQVFGRPIGKNQAIAHPLADAYM 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSG 423
            + AA   ++  A  +D +K+ S  +  +   A    KY   + A      A+   GG G
Sbjct: 299 RLEAAKLATYHAARIYDASKTDSSISLQSVGTACNSAKYLAAEAAYTACERAVMTHGGMG 358

Query: 424 YIEERSIARHYRE 436
           Y  E  + R  RE
Sbjct: 359 YAVEYDVERWLRE 371


>gi|182434788|ref|YP_001822507.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463304|dbj|BAG17824.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 380

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 106/257 (41%), Gaps = 16/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  +++A+     G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAEDRGDH-WLLNGSKTFISNGIIADLVVVVAKTTAEGGAKGL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             ++ +    G    R  +KIG ++  T EL F++        L    G    + ++  L
Sbjct: 183 SLIVVERGAEGFERGRNLDKIGQKAQDTAELFFNDVRVPKENLLGTRDGAF--LHLMTNL 240

Query: 319 DSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               M ++   ++ AE +      Y + R   G  L     ++  IA++A + A   A  
Sbjct: 241 AQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAVTRAF- 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D       +     + A + K+W  ++   V    ++  GG GY+ E  +A+ 
Sbjct: 300 ------LDRCIVDHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEYRVAKA 353

Query: 434 YRESPANSILLGSGNAM 450
           + +    +I  G+   M
Sbjct: 354 FTDGRVQTIYGGTTEIM 370


>gi|100817933|ref|NP_766266.3| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Mus musculus]
 gi|26344894|dbj|BAC36096.1| unnamed protein product [Mus musculus]
 gi|74211342|dbj|BAE26429.1| unnamed protein product [Mus musculus]
          Length = 625

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 38/272 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GSGY+++    R  R++    I  G+   + L
Sbjct: 407 GSGYMKDYPYERMLRDARILLIFEGTNEILRL 438


>gi|46203153|ref|ZP_00208825.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 168

 Score = 45.4 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-S 387
           R ++ EA+  + +R   G  L D  +++  IAD+A+ I  +  L +R A   D    R +
Sbjct: 39  RRAMDEAVSRSVKRKAFGSRLADFQLIQAKIADMAVAIDTSALLIYRSAWVKDTKGGRVT 98

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA+ A++       W  + A  VI +A++  GG G I   ++ + YRE  A  I  G+ 
Sbjct: 99  REASMAKL-------WATEQAQMVIDQAVQIWGGLGVISGMAVEQLYREIRALRIYEGTS 151

Query: 448 NAMVLDVLNLLEKGTNL 464
               L + + + +G  L
Sbjct: 152 EIQKLVIASKVYEGLPL 168


>gi|329941600|ref|ZP_08290865.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329299317|gb|EGG43217.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 408

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R   S+  
Sbjct: 273 MAVGTARAAYEVALDYAKTRQQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRA--SWMA 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R   AA   +    +K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 331 VNGRPFTAAEGSM----SKLFASETAKKVTAQAVQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|299132386|ref|ZP_07025581.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298592523|gb|EFI52723.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 395

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 39/296 (13%)

Query: 198 IGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVG 254
           IG G +TE   G+++  + ++  +  DG + LSG K F+S + ++D   +LA+  E   G
Sbjct: 122 IGCGAVTEPGTGSNVRQLRTRAVRDGDG-WRLSGEKMFISNATVADISTVLARTGENEFG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTG 307
            F++ R +       L       K+G    +   +   N +    F LGD    L+ +  
Sbjct: 181 IFILDRSVHKFESGEL------EKLGLNGWSFGSITLDNVYIGDEFRLGDGASGLSEAMS 234

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             E  +  +    A++S    R +L +AI YA  R   G  +    ++++ +AD+A +  
Sbjct: 235 GFERARAWV----AVISSGIARAALDDAIRYATERDQFGVPIAAHQLVQKLLADMACETE 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L+++   + D A  R +      +   + K +  + A  V + A++  G  G   E
Sbjct: 291 AMQLLTYKALAALD-AGGRCD------LPTSMAKVYASEAAVRVASRAIQVHGACGVTRE 343

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             + RH+R +   +I  G+        +N L  G  L E     +   LG++G+K 
Sbjct: 344 FPVERHFRNARMLTIPDGTTQ------INQLIIGRELTE-----IPAFLGAAGRKT 388


>gi|302422154|ref|XP_003008907.1| medium-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
 gi|261352053|gb|EEY14481.1| medium-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
          Length = 516

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 47/248 (18%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A I +  +K +DG  Y ++G  KW  +   SD  ++  + E  +  
Sbjct: 247 ICLAITEAFAGSDVAGIRTTAKKTADGKHYIVNGTKKWITNGVFSDYSVVAVRTEKGLSV 306

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
            LV    E G  +G+  +++K              +S T G      +    PVE++   
Sbjct: 307 LLV----EHG--DGVEAKQIKTS------------YSTTAGTAYITYDDVKVPVENLLGA 348

Query: 313 ---KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               I + L +        A  +V   R+ + E++ +A +R V G  LI+QPV+++ +A 
Sbjct: 349 ENNGIHVVLSNFNHERWNMASATVRNCRLVVEESLKWANQRLVFGKRLIEQPVIRQKLAK 408

Query: 362 -IALDIAAAT---ALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEA 415
            IAL  A  +    +++++ N   + +S+        +  PI   K    + A  +  EA
Sbjct: 409 MIALTEANQSWLETITYQMCNMPYKEQSK-------HLGGPIGLLKMSTTRAAHEIADEA 461

Query: 416 MECIGGSG 423
           ++  GG G
Sbjct: 462 VQIWGGRG 469


>gi|217969181|ref|YP_002354415.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506508|gb|ACK53519.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 393

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  +  D  + L+G K W  +   +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPNAGSDVVSMKLRADRKGD-RFILNGSKMWITNGGDADTLVVYAKTDIAAGPKGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKI 314
              + +    G  +    +K+G R + T  L F +        L G+ N+  G    M  
Sbjct: 187 TAFIIEKGMKGFSHGTHLDKLGMRGSNTFPLFFDDVEVPAENVLGGEANIGRGVQVLMSG 246

Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           L Y + A++S   +  M   +   + Y   R      + +  +M+  +AD+    +A  A
Sbjct: 247 LDY-ERAVLSGGPLGIMAACMDVVVPYLHERKQFDTPIGEFQLMQGKVADLYSTWSACRA 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            ++ +  + D    R++ A   R  A     +  + A  +  EA++ +GG GY  E +  
Sbjct: 306 YAYAVGQACD----RTDHARTLRKDAAGVILYTAEKATWMAGEAIQTLGGVGYTNEYATG 361

Query: 432 RHYRESPANSILLGS 446
           R +R++    I  G+
Sbjct: 362 RLWRDAKLYEIGAGT 376


>gi|238488427|ref|XP_002375451.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
 gi|317136673|ref|XP_001727209.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
 gi|220697839|gb|EED54179.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
          Length = 512

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +   K  DG  Y ++G  KW  +   +D F++  + E      L
Sbjct: 245 LAITEAFAGSDVAGLRTTATKTPDGKHYIINGTKKWITNGMFADYFVVGCRTEKGFSVIL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR        G+  + +K      +  T  ++F N        + V     E+ K  I 
Sbjct: 305 VPR------GEGVETKLIKTSYST-AAGTAYIQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSA------IMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S       +M+   +R+++    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 352 IMSNFNHERFMMACGTIRMAMTVVEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      +  E+A +      + K    + A  +  +A    GG G 
Sbjct: 412 NQAWLESIAYQMCNM-----TYKEQATHLGGPIGLLKSHATRAAQEIAEQATNIFGGRGL 466

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 467 TQTGMGKVIEMFHRTYKFDAILGGT 491


>gi|300712456|ref|YP_003738269.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
 gi|299126140|gb|ADJ16478.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 31/236 (13%)

Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQV-----EGR-VGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y +SG K F  ++ ++D  +++A+      EG  V  FLVP + +DG   G  ++R K  
Sbjct: 150 YSISGEKSFGTNAGVADVHLVVARKRPAPEEGHGVSVFLVPSV-DDG--EGFAFER-KEF 205

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM--------RV 330
           +G R + T +    +TF  +  D +   G V +    I + +  M+ +G+        R 
Sbjct: 206 MGMRGHITGD----STFDDVRVDESALLGEVGE-GFRIAMGTIDMARTGLGAIGTGIARG 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +  EAI YA  R   G  +     ++  +AD+   +  A  L +  A +  + +  + ++
Sbjct: 261 AFGEAIDYAGARDQGGQAVGQYQAVQVLVADMDARLDGARHLVYDSAKAIADGEPSTRKS 320

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A       KY   + A  V   A++  GG GY ++  + R YR++   SI+ G+
Sbjct: 321 SKA-------KYVASEAAEFVTRNAIQVHGGKGYRKDLPLERFYRDAKILSIIGGT 369


>gi|297560091|ref|YP_003679065.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844539|gb|ADH66559.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 49/283 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252
             +TE   G+D  AI ++  +  D  + ++G K F++      F M+  V       +G 
Sbjct: 128 FAITEPGAGSDAKAIRTRAVRDGD-TWVVNGEKTFITGGNEADFAMVFAVTDPDRGADGG 186

Query: 253 VGCFLVPR----------LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFL 298
           V CFLV R           + +  P  L +Q ++    N +G               GF 
Sbjct: 187 VTCFLVDREAGWTSEPIDTMGERRPASLVFQDVRVPHENILGEEGR-----------GFE 235

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L    +  G         YL  A  ++ G    L  AI Y+R R   G  + D+  ++  
Sbjct: 236 LAMKWIGKGR--------YLLPA-RALGGCERLLDMAIEYSRTRETFGAPIADRQAIQWM 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD   +I A   L    A      +        +R    I K +    A  ++   M+ 
Sbjct: 287 IADSQTEIEALRLLVLHAAWQVSVGRD-------SRHAQSIAKLFGGVKANEIVDRVMQI 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG GY  E  I R YR+     I  G+       +   L KG
Sbjct: 340 HGGMGYTRELPIERFYRDVRLLRIFEGTDEIQRRTIARDLLKG 382


>gi|149048721|gb|EDM01262.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b
           [Rattus norvegicus]
          Length = 438

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIK 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRES 437
           GSGY+++    R  R++
Sbjct: 407 GSGYMKDYPYERMLRDA 423


>gi|119715626|ref|YP_922591.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536287|gb|ABL80904.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 390

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 107/254 (42%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D  A+  + + + DG  + L+G K W  ++  S+ + ++A  +       + 
Sbjct: 129 LSEPDAGSD--AVGMKARAVRDGDTWVLNGVKRWITNAGESEYYTVMAVTDPEKRSRGIS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDM 312
             + + S  G+ +   + K+G + + T E+   N         G   G   ++   ++  
Sbjct: 187 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIGADRMIGAEGGGFEIAMRTLDHT 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           ++ I    A  +V   + +L  A+ YA+ R   G  + D   ++  +AD+ + + AA  L
Sbjct: 247 RVTI----AAQAVGIAQGALDYALGYAQERKQFGKPISDFQGLQFLLADMGMKVEAARQL 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  A   +   S               K +   +A  V   A++ +GG GY  +  + R
Sbjct: 303 TYAAAGKSERGDSD------LTFFGAAAKCFASDVAMEVTTNAVQVLGGYGYTRDYPVER 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 MMRDAKITQIYEGT 370


>gi|332530999|ref|ZP_08406921.1| butyryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
 gi|332039560|gb|EGI75964.1| butyryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
          Length = 619

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 74/368 (20%), Positives = 146/368 (39%), Gaps = 81/368 (22%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++ +  T +  + +A K FS ++  T             + L+E + G+ ++ I
Sbjct: 124 TVGNANLLMVHGTEKQKQVFALKEFSGQWSGT-------------MCLSEPQAGSSLSDI 170

Query: 215 TSQGQKISDGI----------YCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----- 254
            ++   I DG           Y L G+K ++S+   +       ++LA++ G  G     
Sbjct: 171 ATKA--IPDGADFAQDPLGPRYRLRGNKMWISAGEHELTENIVHLVLAKIPGPDGKPVPG 228

Query: 255 -----CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF------------ 291
                 F+VP+ L +      G  N +    L +K G R      L F            
Sbjct: 229 VKGISLFIVPKKLVNAEGELTGERNDVALAGLNHKCGWRGTTNTLLNFGEGKFPVGQAGG 288

Query: 292 -----SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                +   G+L+G     L      + + +I I + + ++ ++G   +L  A +  + R
Sbjct: 289 YDGNGAGAVGYLVGQAGEGLRCMFHMMNEARIGIGMAATMLGMAGYHAALDYAKNRPQGR 348

Query: 343 HVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-- 391
            ++G           +I+   +KR +         + AL    A   DE ++ + EAA  
Sbjct: 349 PITGAGKDASQPQIRIIEHADVKRMLLAQKSYCEGSLALLLYCARLVDEQRTGTPEAADE 408

Query: 392 ---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +      + A++  GG GY  +  + +++R+   N I  G+  
Sbjct: 409 ARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDQRLNMIHEGTHG 468

Query: 449 AMVLDVLN 456
              LD+L 
Sbjct: 469 VQALDLLG 476


>gi|308487868|ref|XP_003106129.1| CRE-ACDH-6 protein [Caenorhabditis remanei]
 gi|308254703|gb|EFO98655.1| CRE-ACDH-6 protein [Caenorhabditis remanei]
          Length = 433

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 21/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + ++E   G+D++AI +  ++    +       W  +   +D   +L             
Sbjct: 170 IAVSEPHAGSDVSAIRTHARRFGTDLIINGSKMWITNGDQADWACVLVNTSNEKNLHKNK 229

Query: 260 RL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
            L  +   SP G+      +K+G R + TV+L F +      F++G+     G     ++
Sbjct: 230 SLVCIPLDSP-GVHRSSPLDKLGMRCSDTVQLFFEDVRVPASFIIGE----EGRGFSYQM 284

Query: 315 LIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + D  +++V+     ++  + + I YAR R + G  L+DQ  ++  +A++  ++ A  
Sbjct: 285 KQFNDERLVTVAVGLLPLQNCINKTIEYARERSIFGKTLLDQQYVQFRLAELEAELEATR 344

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L +R       A+ + E+ +   ++  ++K    ++A  V    ++  GG+GY+ +  I
Sbjct: 345 SLLYRTV----MARCQDEDVS---MLTAMSKLKIGRLARKVTDSCLQIWGGAGYLNDNGI 397

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R +R+    SI  G    M+
Sbjct: 398 SRAFRDFRIFSIGAGCDEVMM 418


>gi|167045380|gb|ABZ10036.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine microorganism HF4000_APKG10F13]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 112/265 (42%), Gaps = 29/265 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D + + ++     D  Y L+G K W  +
Sbjct: 111 FGSEDQKKKYLPGMATGELIGCFGLTEPDHGSDPSRMETKAIANGDD-YVLNGAKMWITN 169

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             ++D  I+ A+++G++  F++ +     +  G     +K K   R++ T EL   +   
Sbjct: 170 GTIADLAIVWAKLDGKIRGFIIEK-----NDEGFSAPEMKGKHSLRASVTSELVLQDCRI 224

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             G LL +++   GP      L  L  A   +    +  A   ++A  ++    I+  +P
Sbjct: 225 PGGRLLPNVSGLKGP------LSCLTQARYGIVWGALGAAMGCYHASVKYAKSRIMFGKP 278

Query: 354 V-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +++ +A +  +I     L++ L  + D+ ++  E       M  + K     +A
Sbjct: 279 IGSFQLVQQKLAWMLREITKGQLLAYHLGRAKDKDEASPE-------MVSLGKMNNVDVA 331

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
            ++   A +  G +G + E  I RH
Sbjct: 332 LSIARMARDIHGANGILNEYPIMRH 356


>gi|197119205|ref|YP_002139632.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197088565|gb|ACH39836.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 379

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 35/296 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T   IG   LTE   G+D  AI +  ++  D  + ++G K F+++
Sbjct: 101 FGTEEQKKKWLPDLNTGKVIGCFLLTEPDAGSDAGAIATTYKRDGDH-FVINGSKIFITN 159

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  ++ A  +  +    V   + D    G+   + + K+G R         S T  
Sbjct: 160 GGYKGTGVLFATSDKNLKHKGVSAFIIDLQSPGVEILKNEKKLGIRG--------SYTTA 211

Query: 297 FLLGDLNVSTGPVEDM--------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F L  + +   PVE++        KI +  L+   + ++   + +AE     A+ Y++ R
Sbjct: 212 FALDSVRI---PVENLLGQEGQGFKIAMDTLNGGRIGIASQALGIAEGAFDLALAYSKER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  +AD+   I  +  ++++ A   D  K+ + E+A  +++A     
Sbjct: 269 KQFGHPICELQAIQFKLADMYAKIETSKLMTYKAACLKDSKKNYTMESAMCKMLAS---- 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + A  V  EA++  GG G+I +  + R YR++    I  G+     + V  LL
Sbjct: 325 ---EAATFVTKEAIQIHGGYGFIVDYEVERMYRDAKITEIYEGTNEVQRVVVSKLL 377


>gi|224130308|ref|XP_002194107.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Taeniopygia guttata]
          Length = 419

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 39/264 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A I ++ ++  D  Y ++G K W  +   ++ + +LA+ +          
Sbjct: 158 VTEPGAGSDVAGIRTRAERKGDE-YVINGQKMWITNGGKANWYFLLARTDPDPRAPASKA 216

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
               ++E  SP G+   R +  +G R + T  + F +               F   +G  
Sbjct: 217 FTGFIVEANSP-GIQIGRKELNMGQRCSDTRGIVFEDVRVPKENVLIAEGAGFKIAMGAF 275

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + +  PV           A  +V   R +L EA  YA  R   G  +++   +   +A++
Sbjct: 276 DKTRPPV-----------AAGAVGLARRALDEATRYALERKTFGKPIVEHQAVAFLLAEM 324

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ +  A     R A   D  +  +         A I K +   +A  V  +A++  GG+
Sbjct: 325 AMKVELARLGYQRAAWEVDAGRRNT-------FYASIAKAFAGDVANQVATDAVQIFGGN 377

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  E  + +  R++    I  G+
Sbjct: 378 GFNTEYPVEKLMRDAKIYQIYEGT 401


>gi|119713662|gb|ABL97713.1| putative acyl-CoA dehydrogenase [uncultured marine bacterium
           EB0_39H12]
          Length = 362

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 44/277 (15%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W PKI   E               IG+GL+E  G  + A I     + S+G   LSG   
Sbjct: 110 WLPKIAGGE-------------CVIGVGLSEYVGAREDAGI-----EFSNG--KLSGRSL 149

Query: 234 FL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           FL     +DA+ +LA   G +  FLV    E  SP     + ++    +++  ++EL   
Sbjct: 150 FLIDGKNADAY-LLANKSGEL--FLV----EASSPG---IEVIELTTVDKTRTSIELILK 199

Query: 293 NTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +    LL    D +V    ++  +I++  D+    V   +V L +++ Y+  R   G ++
Sbjct: 200 DVNADLLSGSSDKSVIEKVLDAGRIMLAADT----VGAAQVMLDKSVAYSLERKQFGRLI 255

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +K   A++A ++    ++ +  A+ FD           AR+MA  TK    ++  
Sbjct: 256 GSFQAVKHMCAEMAAELEPCHSMIWHAAHCFDNVPEE------ARLMACQTKAHISEVGQ 309

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            V   A E  GG G+ +E  +   ++    N  LLGS
Sbjct: 310 QVSKTATEVHGGMGFTDELGLHYWFKRIGLNKQLLGS 346


>gi|209963490|ref|YP_002296405.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209956956|gb|ACI97592.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 404

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 22/272 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  ++ ++ +K++ G + LSG K W  +SP++D F++ A+ E G +  + 
Sbjct: 148 FGLTEPDAGSDPGSMKTRARKVAGG-WTLSGSKTWITNSPIADIFVVWAKDEAGDIRGW- 205

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMK 313
              +LE G   GL   +++ K   R++ T  +     F      L G   +S GP   + 
Sbjct: 206 ---VLEKGMA-GLSAPKIEGKFSLRASVTGMIMMDEVFVPEENLLPGAKGLS-GPFGCLN 260

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              Y   A  ++         A  Y   R + G  L    ++++ +AD+  +IA     +
Sbjct: 261 KARY-GIAWGAMGAAEFCWHAARQYTLDRQMFGRPLAATQLIQKKLADMQTEIALGLQGA 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             L    D          +A     + K   C  A  +   A +  GG+G  +E  + RH
Sbjct: 320 LALGRMLD-------AGTWAPEAISLMKRNNCGKALDIARVARDMHGGNGIADEYHVIRH 372

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                A +   G+ +   L +L   + G   F
Sbjct: 373 VLNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 403


>gi|148703120|gb|EDL35067.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_f [Mus
           musculus]
          Length = 438

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+ E         
Sbjct: 184 LTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKT 243

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R        G+   + ++K+G R + T E+ F NT        G + G   
Sbjct: 244 DKMTAFIVERDF-----GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 298

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S   +V+GM   L E    YA  R      L +  +++   A +
Sbjct: 299 VAMNILNSGRF-----SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALM 353

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  +   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 354 AQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 406

Query: 421 GSGYIEERSIARHYRES 437
           GSGY+++    R  R++
Sbjct: 407 GSGYMKDYPYERMLRDA 423


>gi|116203455|ref|XP_001227538.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88175739|gb|EAQ83207.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 527

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 100/265 (37%), Gaps = 38/265 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A +T + +   DG  Y ++G K W  +    D F    +  G    
Sbjct: 272 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWCDYFTTAVRTGG---- 327

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
              P +      +G  Y   ++         V++   N  G       V        +I 
Sbjct: 328 ---PGMNGGVWSSGTTYITFED---------VKVPVENLIGKENQGFRVIMTNFNHERIG 375

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           I +     S    RV   E++ YA +R   G  LID PV++  +A +A  I A+      
Sbjct: 376 IIIQCLRFS----RVCYEESVKYASKRRTFGKKLIDHPVIRLKLAHMARQIEASYNW--- 428

Query: 376 LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMECIGGSGYIE 426
           L N   + +   +  A  R+  PI         T  +C + A  +        GG G   
Sbjct: 429 LENIIYQCQKMGDTEAMLRLGGPIASLKAQSTVTFEFCAREASQIFGGLSYSRGGQG--- 485

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
              + R YR+  A +I  GS   M+
Sbjct: 486 -GKVERLYRDVRAYAIPGGSEEIML 509


>gi|240281937|gb|EER45440.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 456

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 27/279 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+A I +  ++ S   Y ++G K ++++ +   +       G  G   + 
Sbjct: 190 LGITEPDAGSDVANIRTTAKR-SGNKYIVNGAKKWITNGIWAHYCTAEVRTGGKGRGGIS 248

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFG-------FLLGDLNVST 306
            L+   +  G+  +R++N   N S +T      VE+   N  G       +++ + N   
Sbjct: 249 LLIIPLAAKGVTRRRMENSGVNASGSTFIEFDDVEVPAENLIGIENDGFRYIMSNFNPER 308

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                    + L S+ + +S  RV + +A +YA  R   G  LI   +++   + +   I
Sbjct: 309 ---------LGLASSCVRLS--RVCVEDAYNYAITRETFGQPLIANQIIRAKFSKLGRLI 357

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               A   +LA +   A    +EA    + A + K    +    V  EA + +GG+GY +
Sbjct: 358 EPCQAFLEQLAYTVQVAAKTGQEANVGGMTA-LLKVMSTRCLEKVCREAQQVMGGAGYDK 416

Query: 427 ERSIARHYRES-PANSILLGSGNAMVLDVLNLLEKGTNL 464
               AR  + S      ++G G+  +L  L + E+  NL
Sbjct: 417 SGRGARIEQISRDVRVYVVGGGSEEILSDLAVREEIKNL 455


>gi|160773274|gb|AAI55273.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 163 VTEPGAGSDVAGIKTRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 221

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 222 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 273

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 274 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 334 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 386

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 387 EYPVEKLMRDAKIYQIYEGT 406


>gi|294948870|ref|XP_002785936.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239900044|gb|EER17732.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 427

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 22/268 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE   G+D+A I +  +  +DG  Y +SG K ++++ +   +  +A   G VG   +
Sbjct: 156 LCITEPYAGSDVANIRTTAKLSADGKHYIVSGEKKWITNGIFADYFSVAVRTGGVGMKGI 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             LL +    G+   R++ + G   + T  +EF++       L+G  N      E  +++
Sbjct: 216 SMLLIERDMPGVKTTRMECQ-GVWPSGTTFVEFNDVKVPVENLIGREN------EGFRVI 268

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +Y            +    RV   E+  YA++R   G  L++ PV++  +A++A  I   
Sbjct: 269 MYNFNHERWGFVAQAARLSRVLYEESFKYAQKRRTFGKTLMEHPVIRWKLAEMARQIEGV 328

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE-- 427
                 + +  +         A    +A + K    K+      EA +  GG+ Y     
Sbjct: 329 QYWLESVTHQMNVMPWGESMTALGGTLA-LMKAHSTKVFEYCAREAAQVFGGNAYTRSGL 387

Query: 428 -RSIARHYRESPANSILLGSGNAMVLDV 454
              + R YR+  A +I  GS   ++LD+
Sbjct: 388 GEKVERLYRDVRAYAIPGGS-EEILLDL 414


>gi|170768793|ref|ZP_02903246.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
 gi|170122341|gb|EDS91272.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
          Length = 383

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 28/278 (10%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T ++ ++    A  L LTE   G+D  + T+   + +  +Y ++G K F++      +++
Sbjct: 108 TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYML 166

Query: 246 L----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNT 294
           +     + +     F +   +E   P G+    L +KIG    +T       VE++ S+ 
Sbjct: 167 VLARDPEPKDPKKAFTL-WWVESSKP-GIKINPL-HKIGWHMLSTCEVYLDNVEVDESDM 223

Query: 295 FGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            G   +G LNV      +M+ LI   +A  S      +  +A  YA +R   G  +    
Sbjct: 224 VGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIAFGKPIGHNQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C + A  VI 
Sbjct: 279 MIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYCARTALEVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 332 DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|294011860|ref|YP_003545320.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675190|dbj|BAI96708.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 356

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 39/190 (20%)

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ AI S      DG Y ++G K F+
Sbjct: 150 PKLVSGEWTGT-------------MNLTEPQAGSDVGAIRSVATPAGDGSYRITGSKIFI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE--DGSP---NGLCYQRLKNKI 279
           S    D       ++LA++ G       +  FLVP+ L   DG+P   NG+    +++K+
Sbjct: 197 SWGDHDVADNIVHLVLARLPGAPAGSKGLSLFLVPKYLPDADGAPGQRNGVRCVSIEHKL 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLAE--- 334
           G  ++ T  + F       +G      GP +     +   ++ A +S+    V++AE   
Sbjct: 257 GIHASPTCTMSFGEEDDACVG---WRIGPEQGGMRAMFTMMNHARISIGLQGVAIAERAY 313

Query: 335 --AIHYARRR 342
             A+ +AR R
Sbjct: 314 QGALAFARER 323


>gi|254823119|ref|ZP_05228120.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 53/265 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVG-- 254
           G GLTE   G+D  A T    ++  G + ++G K F+++  +D  + + +  V G VG  
Sbjct: 127 GFGLTEPGAGSDAGA-TRTTARLEGGEWVINGSKQFITNSGTDITSLVTVTAVTGSVGGD 185

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
                  +VP     G+P G   + + +K+G  ++ T  L F++       LLG+     
Sbjct: 186 KKEISTIIVP----SGTP-GFTVEPVYSKVGWNASDTHPLSFADARVPEENLLGERG--R 238

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    + IL    +  A ++    +  + E++ Y++ R   G     QP           
Sbjct: 239 GYANFLSILDEGRIAIAALATGAAQGCVDESVKYSKERQSFG-----QP----------- 282

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAY----ARIMA--------PITKYWCCKMAPAVI 412
            I +  A+SF++A    EA++     AY    A+++A         I K    + A    
Sbjct: 283 -IGSYQAISFKIARM--EARAHVARTAYYDAAAKMLAGKPFKKEAAIAKMIASEAAMDNA 339

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
            +A +  GG G++ E  +ARHYR+S
Sbjct: 340 RDATQIHGGYGFMNEYPVARHYRDS 364


>gi|119475726|ref|ZP_01616079.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451929|gb|EAW33162.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 12/241 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P  +      + ++E   G+D A + ++  +  D  + L+G K W      +D  I++A 
Sbjct: 120 PYARGEAVSAIAISEPGAGSDPAGMITKAVRDGDE-WVLNGRKIWVSRVDEADFTILMAV 178

Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-LLGDLNVST 306
            E G+    +   ++E  +P G    R    IG  +   + L+        LLG+L    
Sbjct: 179 TEPGKGNAGISAFIIEKDTP-GFIISRHIPMIGGHTTFEITLDDCRLPATQLLGELGKGF 237

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P++   ++  L      V   R ++     YA+ R+  G  L D+  ++  +AD  + I
Sbjct: 238 APMQLRLVIRRLQMGAWCVGMARRAVDIICEYAKNRNTFGASLADRQAVQWWVADAEIKI 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   +         +A  + +     R  A + K +  ++A  +I +AM+  G  G  +
Sbjct: 298 HACRLM-------LQQAAWKQDRGEDVRTEASMVKVYGTELATDIIDQAMQTCGAMGMTK 350

Query: 427 E 427
           E
Sbjct: 351 E 351


>gi|293405193|ref|ZP_06649185.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|291427401|gb|EFF00428.1| conserved hypothetical protein [Escherichia coli FVEC1412]
          Length = 150

 Score = 45.4 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L +A  S      +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A
Sbjct: 10  LINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVA 69

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +S    AA A++       +C + A  VI +A++ +GG GY +E  ++R +R+ 
Sbjct: 70  WQADQHQSLRTSAALAKL-------YCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDV 122

Query: 438 PANSILLGSGNAMV 451
               I  G+   M+
Sbjct: 123 RCERIGGGTDEIMI 136


>gi|213964639|ref|ZP_03392839.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
 gi|213952832|gb|EEB64214.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
          Length = 394

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 17/254 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE+  G+D  ++ ++  +  D  + L+G K F+++   S  + ++A  +   G   +  
Sbjct: 130 LTEREAGSDAGSMKTRAVREGD-EWVLNGSKCFITNGGRSTWYTVMAVTDPEKGANGISA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
            +      G     L++K+G + + T EL F N       ++GD             L  
Sbjct: 189 FMVHKDDEGFRVGGLEHKLGIKGSPTAELYFENCRIPADRIIGDEGTGF-----KTALET 243

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD    ++    + +A+     A+ Y + R   G  +      +  +AD+ + I AA  +
Sbjct: 244 LDHTRPTIGAQALGIAQGAYDYAVGYVQERQQFGKPIAAFQNTQFMLADMRMKIDAARLM 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A + +  +  +E  A   +MA   K +   +A  V  +A++ +GG G+  +  + R
Sbjct: 304 VYTAAANAE--RGTAEGGARLGLMAANAKAFASDVAMQVTTDAVQLLGGYGFTRDFPVER 361

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 362 MMRDAKITQIYEGT 375


>gi|254391645|ref|ZP_05006843.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326441467|ref|ZP_08216201.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197705330|gb|EDY51142.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 122 PLAKGEAMFSYCLSEPDAGSDAAGMKTKAVRDGDH-WVLNGVKRWITNAGVSEYYTVMAV 180

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 181 TDPEKRSKGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 238

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y R R   G  + D   ++  +A
Sbjct: 239 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVRERKQFGKPIADFQGVQFMLA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   ++          K +    A  +  +A++ +G
Sbjct: 296 DMAMKLEAARQLTYAAA-----AKSERVDSDLT-FFGAAAKCFASDAAMEITTDAVQLLG 349

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 350 GYGYTRDYPVERMMRDAKITQIYEGT 375


>gi|123235921|emb|CAM15108.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 426

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 165 VTEPGAGSDVAGIKTRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 223

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 224 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 275

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 276 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 335

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 336 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 388

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 389 EYPVEKLMRDAKIYQIYEGT 408


>gi|255072977|ref|XP_002500163.1| cytochrome b5-like Heme/Steroid binding fusion with acyl-coa
           dehydrogenase [Micromonas sp. RCC299]
 gi|226515425|gb|ACO61421.1| cytochrome b5-like Heme/Steroid binding fusion with acyl-coa
           dehydrogenase [Micromonas sp. RCC299]
          Length = 524

 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 37/274 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSG-HKWFLSSPMSDAFI--MLAQVEGR 252
           I L ++    G+D+AA+     K+SD    Y +SG  KW  +   SD F+  ++ +  GR
Sbjct: 250 ICLAISGPEAGSDVAAVACVA-KLSDCRTHYLVSGVKKWITNGVFSDYFVTAVVTKPGGR 308

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
               L   L+E G   G+  + +K    + +  T  + F N     G +LG +       
Sbjct: 309 -KPELSLMLIERG--EGVDTKPIKTSY-SPAAGTAYVTFENAKVPTGNVLGKIG------ 358

Query: 310 EDMKILI--------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           E  K+++        Y+ +     S  R+ + E + ++ +R V G  LIDQPV++  +A 
Sbjct: 359 EGFKLIMHNFNHERWYIVAGANRAS--RLVVEECLKWSVQREVFGARLIDQPVIRAKLAR 416

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECI 419
           +A  +    A    L +     K  + E   A +  PI   K++C ++A  V  EA +  
Sbjct: 417 LASQVEGVQAW---LESVTFAMKHTTHEEQAAMLAGPIALLKHFCTRVANDVSDEACQIF 473

Query: 420 GGSGYIEE---RSIARHYRESPANSILLGSGNAM 450
           GG         + + R  R +   +IL GS   M
Sbjct: 474 GGRAITRTGMGQVVERFQRSAKFAAILGGSEEVM 507


>gi|302547367|ref|ZP_07299709.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464985|gb|EFL28078.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 409

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 40/281 (14%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IM 245
           AP+    V   + +TE     G+D   + +  ++  DG + ++G K F +     AF I 
Sbjct: 134 APLAAGEVRSAIAMTEPAPGAGSDPRMLMTVAEETDDG-WVINGRKHFTTGAEGAAFTIC 192

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +A  +  V  FLV     D    G+       K+G R      L+ SN  G    ++   
Sbjct: 193 VANTDDGVTLFLV-----DQDNPGM-------KVGRRMPT---LDHSNPGGH--SEVAFE 235

Query: 306 TGPVEDMKILIY----LDSAIMSVSGMRVSL-------AEAIHYARRRHVSG----GILI 350
              V D  +L      LD A   ++  R++L       A   H    RH+ G    G+ I
Sbjct: 236 DCVVPDSAVLGEVGRGLDHAQARLAPSRLTLCMNWLGLATRAHELSARHIGGRSAFGVPI 295

Query: 351 DQPVMKRA-IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  M +  +AD  +DIAA+ AL    A   DE    S +A +A   A + K +  +   
Sbjct: 296 SEHGMAQGLVADNEIDIAASRALIHSTATVLDEQGPLSSDARHA---ASVAKTFVAEAVW 352

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            V   A++  GG G  E+  +AR   E+ A  I  G+   +
Sbjct: 353 RVFDRAVQLHGGLGVCEDHLVARFLVEARAVRIYEGASEVL 393


>gi|301648394|ref|ZP_07248130.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 146-1]
 gi|301073529|gb|EFK88335.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 146-1]
          Length = 380

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV-PR 260
           +TE   G+D+ ++ +   + +  IY L+G K F++S     +I++   +G      V   
Sbjct: 124 ITEPGAGSDVGSLKTTYTRRNGKIY-LNGSKCFITSSAYTPYIVVMARDGASPDKPVYTE 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313
              D S  G+   +L+ K+G   ++  E+ F +        FG      N      +  +
Sbjct: 183 WFVDMSKPGIKVTKLE-KLGLHMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHER 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L+    A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + 
Sbjct: 242 FLV----ALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNML 297

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D     S +AA       + KY+C   A  V+  AM+ +GG G      I+R 
Sbjct: 298 YEAAWKADNGTITSGDAA-------MCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

Query: 434 YRESPANSILLGSGNAMVL 452
           +R+   + +  GS    +L
Sbjct: 351 WRDLRVDRVSGGSDEMQIL 369


>gi|222479568|ref|YP_002565805.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452470|gb|ACM56735.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 133/308 (43%), Gaps = 37/308 (12%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A  + L  TP   ++W               P+ +        LTE   G+D + + + 
Sbjct: 100 GAKPIELFGTPEQKEEWL-------------RPLAEGGKLGAWALTEPGSGSDASNMDTT 146

Query: 218 GQKISD-GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
            +  +D G Y L+G K F++ + ++++ ++ A  +   G   +   + D + +G     +
Sbjct: 147 AEYDADAGEYVLNGTKQFITNATVANSVLVKAVTDSDAGYDGISTFIVDPADDGFEVTTV 206

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G   + T E+   +       LLG+     G  + MK L   D   +S++ + V L
Sbjct: 207 WDKMGLNCSPTCEILLDDVRIPEDRLLGE--EGEGWTQTMKTL---DGGRISIAALSVGL 261

Query: 333 AEAIHYARRRHVSGGILIDQPVMK-RAIADIALDIAAATA----LSFRLANSFDEAKSRS 387
           A+  + A + +        +P+ K  AI D  + +   T     L+ + A ++D     +
Sbjct: 262 AQGAYEAAKEYAGEREQFGKPIAKFDAIRDKVVHMHRQTERARLLTHKAATTYDAGNEVT 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+A A++ A        + A  V  EA++ +GG GY  + +  R YR+  A  + +G G
Sbjct: 322 RESALAKLDA-------SEAAREVAEEAVQTLGGYGYTTDFAPQRFYRD--AKLMEIGEG 372

Query: 448 NAMVLDVL 455
            + +  V+
Sbjct: 373 TSEIQHVV 380


>gi|9757682|dbj|BAB08201.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 428

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 105/235 (44%), Gaps = 17/235 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +S  +D  ++LA+     ++  F+V 
Sbjct: 169 LTEPNHGSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNGFIVR 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    G+P GL   +++NKIG R     ++ F+  F     D        +D+  ++ + 
Sbjct: 229 K----GAP-GLKATKIENKIGLRMVQNGDIVFNKVF-VPEEDRLPGVNSFQDISKVLAIS 282

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +++   + +S+   +     R   G  L+   + +  +  +  +I A   + +RL   
Sbjct: 283 RVMVAWQPIGISM--GVFDVCHRKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKL 340

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++  K     A+       + K W  +MA  V++   E +GG+G + +  +A+ +
Sbjct: 341 YESGKMTPGHAS-------LGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAF 388


>gi|115526301|ref|YP_783212.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520248|gb|ABJ08232.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 390

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 65/291 (22%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W PKI S E        +Q        G+TE   GTD +++ +  +K  +G Y ++G K 
Sbjct: 110 WLPKIASGELR------LQ------AFGVTEPTSGTDTSSLKTVAKKDDNGDYIVNGQKI 157

Query: 233 WFLSSPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           W   +  SD  I+LA+   +         +  FLV   +     +GL  + ++  +   +
Sbjct: 158 WTSRAEYSDLMILLARTTPKEQSAKRTDGLSVFLVD--MRKARGHGLEIRPIRTMM---N 212

Query: 284 NATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +AT E+ F++               F ++L  +N         +ILI    A   +   +
Sbjct: 213 HATTEVFFTDLKVPAANLIGVEGKGFRYILSGMNAE-------RILI----ASECIGDAK 261

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             +A+A  YA+ R V G  +     ++  IA    ++ AA  +       ++       E
Sbjct: 262 WFIAKASAYAKDRVVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEAVRKYEAGMECGAE 321

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           A  A+++A          A A    A  CI   GG G+ EE  + R +RE+
Sbjct: 322 ANMAKMLA----------ADASFEAANACIQTHGGFGFAEEYDVERKFRET 362


>gi|308176777|ref|YP_003916183.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307744240|emb|CBT75212.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 384

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 28/270 (10%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--------AFIMLAQVE 250
           G GLTE   G+D +A  ++  K+ DG + + G K F+++  +D        A   + +  
Sbjct: 123 GFGLTEPGAGSDASAALTKA-KLEDGHWVIDGAKEFITNSGTDITSHVTATAVTGVDEAT 181

Query: 251 GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
           G+  +   +VP   E     G   ++  NK+G  ++ T  L F+        LLG+    
Sbjct: 182 GKKEISAIIVPTGTE-----GFTAEKAYNKVGWHASDTHPLSFNGARVPEENLLGERGRG 236

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                ++     +  A ++    +  + E++ YA+ R   G  +     +   IA +   
Sbjct: 237 YAYFLEILDEGRIAIAALATGAAQGCVDESVKYAKTRTSFGKTIGQYQSISFMIARMQSR 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA    +  A      K    EAA+A+++A        + A     EA +  GG G++
Sbjct: 297 AHAARLAYYAAAAKMLAGKDFKIEAAHAKLIA-------SEAAMDNAREATQIFGGYGFM 349

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
            E  +ARHYR+S    + +G G   V  +L
Sbjct: 350 NETLVARHYRDSKI--LEIGEGTTQVQQML 377


>gi|301062921|ref|ZP_07203502.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300442990|gb|EFK07174.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 380

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 46/271 (16%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQV 249
           IG  +TE   G+D    T+   K  D  + ++G K F ++     ++ML           
Sbjct: 120 IGTAITEPNAGSDPTGATTTAVKDGDS-WVINGSKIFATNGDLADYMMLFCLTDPDNPSK 178

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             R    LVP         G    +L  K+G R++ T EL         L DL V   PV
Sbjct: 179 HRRHSFILVPT-----DSEGYESSKLHGKLGIRASDTAELS--------LKDLRV---PV 222

Query: 310 EDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           E++         +++ + +   + +    V LA     E+I + + R   G  L      
Sbjct: 223 ENLVGREGEGFNELMAFFNRTRLHICAQGVGLARSAIEESIRHTKAREQFGAPLASFQNT 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++A    AA  L +  A   D              +  + K++  + A      A
Sbjct: 283 QFKLAEMATRTRAARNLYYEAAWELDHGN-------IDHGLIAMAKWYSAENAVRCADAA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG GYI+E  + R YR++    I  G+
Sbjct: 336 LQMHGGYGYIDEYKVQRLYRDAKILEIYEGT 366


>gi|296816493|ref|XP_002848583.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238839036|gb|EEQ28698.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 446

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 39/286 (13%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ 248
           M  + V   + +TE   G+D+A IT+  +K +DG  Y ++G K W  +   SD   M  +
Sbjct: 151 MLTSKVRSCIAITEPDAGSDVANITTTAEKSADGKHYIINGEKKWITNGIWSDYTTMAVR 210

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               G  G  L+   L+ G P G+  +RL    G     T  +E  N             
Sbjct: 211 TGGPGPTGLSLIVVPLK-GHP-GVTMRRLPVS-GQVCGGTTYIELDNV-----------K 256

Query: 307 GPVED--------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
            PVE+        MK ++       L  A+      RV+L+ A  Y  +R   G  L+DQ
Sbjct: 257 VPVENLIGQEGHGMKYIMTNFNHERLTIAVGVTRQARVALSSAFEYCMKREAFGKTLMDQ 316

Query: 353 PVMKRAIADIALDIAAATA----LSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCK 406
           PV++  ++    ++ +  A      +++ N   E   K      A A+  A I    C +
Sbjct: 317 PVVRHRLSKAGAELESMWAWVEQFLYQMNNMPKEVGDKRLGGLTALAKAKAGIVLNECAQ 376

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH-YRESPANSILLGSGNAMV 451
           +A  +         G G + ER +     R+ P   I  GS + ++
Sbjct: 377 VAVLLFGGLGFTKSGQGELVERLMNLEILRDVPGARIPGGSEDVLL 422


>gi|225681188|gb|EEH19472.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 551

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 40/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L ++E   G+D++ I +   K  DG  Y +SG  KW  +   +D F+   + E      L
Sbjct: 249 LAVSEAFAGSDVSGIRTTATKTPDGRHYIISGTKKWITNGMWADYFVTACKTEKGYSVIL 308

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           VPR         +  +R+K      +  T  ++F N       LLG+        E    
Sbjct: 309 VPR------DENIETKRIKTAYSTTAATTF-IQFDNVKVPVENLLGE--------EHNGF 353

Query: 315 LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD-IALD 365
           ++ + +        A M     R  + E + +A +R V G  LI+QPV+++ +A  I+L 
Sbjct: 354 IVIMSNFNHERWAMACMVSRWNRTVVEECLKWANQRIVFGKPLINQPVIRQKLAKMISLT 413

Query: 366 IAAATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A+ + L   ++++ N      S +++  +      + K +  + A  +  +A+   GG 
Sbjct: 414 EASQSWLETITYQMCNM-----SYAQQTKHLGGPIGLLKSYATRCAHQIADDAVNIFGGR 468

Query: 423 GYIEE---RSIARHYRESPANSILLGS 446
           G  +    R + + +R    ++IL G+
Sbjct: 469 GITQTGMGRVVEQFHRTYKFDAILGGT 495


>gi|239917215|ref|YP_002956773.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838422|gb|ACS30219.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 395

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 108/269 (40%), Gaps = 54/269 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGR 252
           G GLTE   G+D A  T     + DG + ++G K F+++  +D   ++        VEGR
Sbjct: 128 GFGLTEPGAGSD-AGGTQTTAALEDGQWRINGAKEFITNSGTDITSLITVTAVTGTVEGR 186

Query: 253 VG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            G            LVP   E     G    +  +K+G  S+ T  L F+        D 
Sbjct: 187 TGHDGRPAKEISTILVPAGTE-----GFSVAKAYDKVGWNSSDTHALHFT--------DA 233

Query: 303 NVSTGPVEDM---------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGI 348
            V   P E++           L  LD   ++++ +        + E++ YA++R   G  
Sbjct: 234 RV---PEENLLGARGRGFANFLEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFGQK 290

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   IA +     AA    +  A      K    EAA A+++A        + A
Sbjct: 291 IGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIA-------GEAA 343

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRES 437
                +A +  GG G++ E  +ARHYR+S
Sbjct: 344 MDNARDATQVFGGYGFMNETLVARHYRDS 372


>gi|331699871|ref|YP_004336110.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326954560|gb|AEA28257.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 382

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 37/273 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252
            GLTE  GG+D  A T    ++    + ++G K F+++  +D  + + +  + G      
Sbjct: 123 FGLTEPGGGSDAGA-TRTTARLDGDEWVINGSKSFITNSGTDVTSLVTVTAITGEREGGK 181

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
             +   +VP     G+P G       +K+G  ++ T EL F +     G LLG+      
Sbjct: 182 KEISAIIVP----SGTP-GFTVAPKYSKVGWNASDTHELSFDDCRVPAGNLLGERGRGY- 235

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                + L  LD   ++++ +   LA     E++ YA  R   G  +     ++  IA++
Sbjct: 236 ----AQFLSILDEGRVAIAALGTGLAQGCVDESVRYAHEREAFGQPIGSYQAIQFKIAEM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                 +    +  A      K   +EAA A++++          A     +A +  GG 
Sbjct: 292 ESRAHTSRLAWYAAAAKMQAGKPFKKEAAIAKLVS-------SNAAMDNARDATQIFGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           G++ E  + R YR+  A  + +G G + V  +L
Sbjct: 345 GFMNEFPVGRFYRD--AKILEIGEGTSEVQKML 375


>gi|222870496|gb|EEF07627.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + +S +   +A     +A+ YA+ R   G  + D  +++  +AD   ++
Sbjct: 1   MKVL---DRGRLHISALACGMAHRLITDAVAYAKERKQFGKPIGDFQLIQGMLADSQAEL 57

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  ++    A  +D AK   +      ++A  TK +C +M   V   A++  GG+GYI 
Sbjct: 58  YAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRVADRAVQIHGGAGYIA 116

Query: 427 ERSIARHYRES---PANSIL-LGSGNAMVLDV 454
           E    R YR+    P N +   G G A V  V
Sbjct: 117 EYKAERFYRDDEQVPGNGLARAGHGGAAVKGV 148


>gi|242207282|ref|XP_002469495.1| predicted protein [Postia placenta Mad-698-R]
 gi|220731524|gb|EED85368.1| predicted protein [Postia placenta Mad-698-R]
          Length = 383

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 18/239 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
            GLTE   G+D A + +  ++ +DG + ++G K W  +SP++D FI+ A+   +G++  F
Sbjct: 133 FGLTEPNHGSDPAGMETTAEE-TDGGFVINGAKTWITNSPIADIFIIWARAKWDGKIHGF 191

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           ++ + +E     GL    +K+K+  R +AT  +   N        L   +G       L 
Sbjct: 192 VLEKGME-----GLSAPAIKHKLALRCSATGSIFMDNVKVGHDAILPHGSGMGAPFSCLN 246

Query: 317 YLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                I   ++  +  S+A    YA  RH     L    ++++   D   + A     S 
Sbjct: 247 SARYGISWGAIGALEDSIARTRAYALERHQFKRPLASFQLVQKKFVDAHTEAALGLQASL 306

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++    D  K   E       M  + K   C  A       ++ +GG+   +E  + RH
Sbjct: 307 QVGRLKDAGKLAPE-------MISMVKRNNCGKALEHSRRLLDILGGNACSDEYHVGRH 358


>gi|3023862|sp|P81140|GCDH_PIG RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|260168|gb|AAB24225.1| glutaryl-CoA dehydrogenase, GCDH [swine, liver, Peptide Partial,
           408 aa]
          Length = 408

 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D  ++ ++     S+  Y L+G K W  +SP++D F++ A+ E      +
Sbjct: 147 FGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNC---I 203

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   +++ K   R++AT       VE+   N        L V  G + 
Sbjct: 204 RGFLLEKGM-RGLSAPKIEGKFSLRASATGMIIMDDVEVPEENVLP-KASSLAVPFGCLN 261

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + +  I    +   +      L  A  Y   R   G  L    +++R +AD+  +I    
Sbjct: 262 NARYGI----SWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTEITLGL 317

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +L    D+ K   E       M  + K   C  A  +  +A + +GG+G  +E  +
Sbjct: 318 HACLQLGRLKDQDKVTPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHV 370

Query: 431 ARH 433
            RH
Sbjct: 371 IRH 373


>gi|307103570|gb|EFN51829.1| hypothetical protein CHLNCDRAFT_56353 [Chlorella variabilis]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 28/256 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+ ++  +  K  D  Y L+G+K W  + P++D  I+ A+ +   G   +
Sbjct: 166 IAMSEPNSGSDVVSMRCKADKKGDH-YVLNGNKMWITNGPIADTLIVYAKTDPNAGKHGI 224

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              +      G    +  +K+G R + T EL F N       +LG  N          I+
Sbjct: 225 TGFI------GFSTAQKLDKLGMRGSDTCELLFENCEVPAENVLGQENKGV-----YMIM 273

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   +  +G  + + +A     + Y   R   G  L D  + +  +AD+     A  
Sbjct: 274 SGLDVERLVFAGGPLGILQACLDVTLPYCVERKQFGHRLGDFQMTQAKLADMYTATEATR 333

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  +   ++ A   + A        + A  +   A++  GG+GYI E   
Sbjct: 334 SYLYSVAAAADAGRINRKDCAAVILFA-------AENATRMALHAIQLYGGNGYINEYPT 386

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 387 GRLLRDAKLYEIGAGT 402


>gi|242019871|ref|XP_002430382.1| ATP-binding cassette subfamily E, member 1 [Pediculus humanus
           corporis]
 gi|212515506|gb|EEB17644.1| ATP-binding cassette subfamily E, member 1 [Pediculus humanus
           corporis]
          Length = 419

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 50/264 (18%), Positives = 111/264 (42%), Gaps = 39/264 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           +TE   G+D++ + ++ +K  D  Y ++G K W  +  +++ + +LA+ +       G  
Sbjct: 157 VTEPGAGSDVSGVKTKAEKKGDE-YVINGQKMWITNGGVANWYFVLARTDPNPKTPAGKA 215

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
               +++  +P G+   R +  +G R++ T  + F +               F   +G  
Sbjct: 216 FTGFIVDRDTP-GITVGRKEINMGQRASDTRGITFEDVRVPKENVLLKEGDGFKIAMGAF 274

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + +  PV           A  +V   + +L EA  YA  R   G  +     +   +A++
Sbjct: 275 DRTRPPV-----------AAAAVGLAQRALDEASKYAMERKTFGVPIFSHQAVAFLLAEM 323

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ +  +    +R A   D+ +  +  A+ A+ +A         +A     +A++  GG+
Sbjct: 324 AIGVETSRLAWWRAAWEVDQGRRNTYYASVAKALA-------ADIANKCATDAVQVFGGN 376

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  E  + +  R++    I  G+
Sbjct: 377 GFNTEYPVEKLMRDAKIYQIYEGT 400


>gi|296826452|ref|XP_002850979.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238838533|gb|EEQ28195.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 453

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 47/285 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +K+ D  Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 176 LGITEPDAGSDVSGIKTVAKKVGDH-YIVNGAKKWITNGIWADYCTAAVRTGGPGHGGIS 234

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +R+ N  G  ++ +  LEF +               F +++ + N  
Sbjct: 235 FLIIPLTAEGVTRRRMFNS-GVHASGSTFLEFDDVEVPAENLIGKENEGFKYIMSNFNPE 293

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + L SA + +S  RV + +A  Y+  R   G  L+   V++  I+ +   
Sbjct: 294 R---------LSLASACIRLS--RVCVEDAFKYSTTRETFGQPLLANQVIRAKISKMGQL 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGG 421
           I    A   +LA +      +S E A  +I    M  + K    +    V  EA + +GG
Sbjct: 343 IEPCQAFMDQLAYTI-----KSSEQAGQKIDIGGMTALLKVMSTRCLEKVCREAQQIMGG 397

Query: 422 SGYIEE------RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GY +        +I+R  R       ++G G+  +L  L++ E+
Sbjct: 398 AGYNKAGKGSRIEAISRDVR-----VYVVGGGSEEILRDLSVREE 437


>gi|121607491|ref|YP_995298.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552131|gb|ABM56280.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 411

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 23/265 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-------GIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
             L+E   G+D+AA+ +  +   +         Y L+G K W  +  ++D + + A+ + 
Sbjct: 137 FALSEPEAGSDVAAMQTMARSAEETNPGDRPDSYSLAGSKTWISNGGLADFYCVFAKTDP 196

Query: 252 RVGCFLVPRLLEDGSPNGL-CYQRL----KNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             G   +   + D    GL   Q L     + +     A   L  S   G L G   ++ 
Sbjct: 197 TAGTRGISAFIVDADTPGLDATQHLHVMAPHPLATLRFADCRLPASALLGPLHGGFKLAL 256

Query: 307 GPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             ++     I+  S   +  GM R +LAEA+ +AR+R + G  L D  + +  + ++A  
Sbjct: 257 RTLD-----IFRASVAAAALGMARRALAEAVQHARQRRMFGQTLADFQLTQARLGEMAAL 311

Query: 366 IAAATALSFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +A  L++R A   DE     +S + E     + A + K    + A  VI  A++  GG
Sbjct: 312 VDSAALLTYRAAWLRDEGEKHQRSVAAELRERSVAAAMAKMTATENAQRVIDMALQLHGG 371

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G      +   YR+  A  I  G+
Sbjct: 372 RGVERGSKVEALYRDIRALRIYEGA 396


>gi|119716830|ref|YP_923795.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119537491|gb|ABL82108.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 405

 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 37/268 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-- 254
           G+ +TE   G+D A IT+    + DG  Y L+G K F++S    DA ++ A ++  +G  
Sbjct: 134 GMAITEPGTGSDSANITTTA--VLDGDAYVLNGEKIFVTSGDRCDAVVVWATLDRDLGRA 191

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVST 306
               F+VP+    G+P G+  +RL++K+G +++ T  + F +       LLG  +++V  
Sbjct: 192 AIKSFVVPK----GTP-GMRVERLEHKLGIKASDTATIIFDDCRVPRENLLGSPEIDVKQ 246

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIA--- 360
           G    M      D+    V+ M V  A+ A+   R      G+ I  D+P + ++ A   
Sbjct: 247 GFAGAMAT---FDNTRPLVASMAVGCAKAALDLTRDLLEQAGVEIDYDRPALSQSAAAAK 303

Query: 361 --DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
              +  D  AA  L  + A   D  +  S EA+ A+  A        ++   +    +E 
Sbjct: 304 FLQMEADWEAAHLLMLQAAWMADNRQPNSLEASMAKAKA-------GRVGSDITLSCVEL 356

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            G  GY E   + +  R+S    I  G+
Sbjct: 357 AGSVGYSEAELLEKWARDSKILDIFEGT 384


>gi|298245341|ref|ZP_06969147.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297552822|gb|EFH86687.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 397

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 30/247 (12%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----------LAQVEGRVGC 255
           RGG      T+  ++  DG + + G K F +   + +F +          L  +E   G 
Sbjct: 139 RGGLP----TTVARRQEDGSWIIDGRKTFTTGSHALSFFLTSCAIEDETNLEPIEAERGQ 194

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNTFGFLLGDLNVSTGPVEDMK 313
           FL+PR  E     GL  +   N +G R + +  V LE          +  +   P   ++
Sbjct: 195 FLIPRTAE-----GLRIEDTWNTVGMRGSGSNDVILEHIRVPAEAYMERELPANPGAKLR 249

Query: 314 ILIYLDSAIMSVSGM-RVSLAEAIHYARRRH---VSGGILIDQPVMKRAIADIALDIAAA 369
           +  +    +    G+ + +  EA+++ARRR    +    +   P ++  IA + L +   
Sbjct: 250 LSAWSFPTVAVYLGIAQAARNEAVNFARRRRPNSIKQQSIAAIPHVQEKIAKMELALLQC 309

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+ F +A  F +       + +A       KY     A  ++  AM  +GG+       
Sbjct: 310 NAVFFGIAEQFSQDPESVPASQFA-----AAKYLVTNHAVEIVDLAMRLVGGASLSLNFP 364

Query: 430 IARHYRE 436
           + R+YR+
Sbjct: 365 LQRYYRD 371


>gi|281202024|gb|EFA76229.1| glutaryl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 388

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 8/90 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D A + ++ +K++  G Y L+G K W  +SP++D F++ A+V+ G +  F
Sbjct: 161 FGLTEPNAGSDPAGMQTRARKVAGQGKYILNGTKTWITNSPIADVFVVWAKVDNGDIRGF 220

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++ + ++     GL   +L+ K+  R++ T
Sbjct: 221 VLEKGMK-----GLSAPKLEGKLSLRASIT 245


>gi|110633285|ref|YP_673493.1| isovaleryl-CoA dehydrogenase [Mesorhizobium sp. BNC1]
 gi|110284269|gb|ABG62328.1| isovaleryl-CoA dehydrogenase [Chelativorans sp. BNC1]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 24/257 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  + L+G K W  + P +   ++ A  +  VG   +
Sbjct: 128 LAMSETGAGSDVVSMKLRAEKKND-RFVLNGSKMWITNGPDAGTLVVYATTDLAVGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              + + S  G    +  +K+G R + T EL F +    F  +LG+          ++IL
Sbjct: 187 TAFIVERSMPGFSVAQKLDKLGMRGSNTGELVFEDVEVPFENMLGEEG------HGVEIL 240

Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD   + +SG     M   L   + Y R R   G  +    +++  +AD+   + A 
Sbjct: 241 MSGLDYERVVLSGGPLGIMAACLDATVPYVRERQQFGQPVGSFQLVQGKLADMYTTLNAC 300

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A  + +A + D  ++  ++AA   + A        + A  +  +A++ +GG+GYI E  
Sbjct: 301 RAYVYAVAAACDRGETTRKDAAGCILYA-------AERATRMALDAIQLLGGNGYINEFP 353

Query: 430 IARHYRESPANSILLGS 446
             R  R++    I  G+
Sbjct: 354 TGRLLRDAKLYEIGAGT 370


>gi|294812986|ref|ZP_06771629.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325585|gb|EFG07228.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 391

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 125 PLAKGEAMFSYCLSEPDAGSDAAGMKTKAVRDGDH-WVLNGVKRWITNAGVSEYYTVMAV 183

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + + S  G+ +   + K+G + + T E+   N    +  D  +    
Sbjct: 184 TDPEKRSKGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y R R   G  + D   ++  +A
Sbjct: 242 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVRERKQFGKPIADFQGVQFMLA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   ++          K +    A  +  +A++ +G
Sbjct: 299 DMAMKLEAARQLTYAAA-----AKSERVDSDLT-FFGAAAKCFASDAAMEITTDAVQLLG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 353 GYGYTRDYPVERMMRDAKITQIYEGT 378


>gi|254477236|ref|ZP_05090622.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031479|gb|EEB72314.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 552

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 42/302 (13%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T     +W PKI S E  PT                TE   G
Sbjct: 247 GSLGTRSEIAAELIIAGGTEEQKANWLPKIASAEILPTAV-------------FTEPNTG 293

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFL---V 258
           +D+ ++ ++  K   G Y ++G+K W   +  +    +LA+ +        +  FL    
Sbjct: 294 SDLGSLRTRAVKDECGDYKITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKT 353

Query: 259 PRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
           P   E+  P  G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 354 PGTDENPFPTEGMTGGEIE-VLGYRGMKEYELGFD---GFHVKRENLLGGEEGKGFKQLM 409

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     A+ YA+ R   G  LI  P +   +A +A++I  A 
Sbjct: 410 ETFESARIQTAARAIGVAQSALDIAMQYAQDRKQFGKPLIAFPRVASKLAMMAVEIMIAR 469

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D       EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 470 QLTYFSAWEKDNGHRCDLEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 522

Query: 431 AR 432
           +R
Sbjct: 523 SR 524


>gi|167647538|ref|YP_001685201.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349968|gb|ABZ72703.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 43/258 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
             +TE   G D +++ ++ ++ +DG Y L+G K W   +  ++  +++A+   +  C   
Sbjct: 125 FAVTEPNSGLDTSSLETRAERTNDG-YVLNGRKIWTTGAQRANKILIIARTTPKDQCAKP 183

Query: 256 ------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF----------SNTFGFLL 299
                 F   R   +  P      ++  K    +   +E  F             F +LL
Sbjct: 184 TQGLSLFYTDREKIEAKP----IPKMGRKAVECNMLFIEDLFVPADDLVGEEGKGFSYLL 239

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             LN         ++L     A+ ++   R +LA+A  YA+ R V G  +     +   +
Sbjct: 240 HGLNPE-------RVLF----AVEAIGLGRAALAKATTYAKERVVFGRPIGQNQGVAHPL 288

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A    ++ AA  L+F+ A  +D  +    EA  A+ +     +  C+   +V+A      
Sbjct: 289 ARSWAELEAANLLAFKAAALYDRGQDCGAEANAAKYLGAEAGFTACE--SSVLAH----- 341

Query: 420 GGSGYIEERSIARHYRES 437
           GG GY +E  + R++RE+
Sbjct: 342 GGMGYAKEYDVERYFREA 359


>gi|289643724|ref|ZP_06475834.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506448|gb|EFD27437.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 35/281 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-------QV 249
           I   L+E+  G+D A++ ++ Q   D  + L+G K W  ++  S  + ++A       + 
Sbjct: 124 ISYALSEREAGSDTASMRTRAQLDGDH-WVLNGTKAWITNAGESTWYTVMAVSNPNADKP 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
              +  F+V R        G      + K+G + + T E+ F N       ++G+     
Sbjct: 183 SRGISAFVVHR-----DDPGFSVGHKERKLGIKGSPTREIHFENCTIPANRIIGE----- 232

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
            P   +K  L  LD    +++   + +A+     A+ Y R R   G  + D   ++  +A
Sbjct: 233 -PGTGLKTALATLDHTRPTIAAQALGIAQGALDAAVDYVRERRQFGQRIGDFQGIQFILA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A+ I AA  L +  A + +  +  S         +   K +   +A +V  +A++  G
Sbjct: 292 ELAMKIEAARHLVYASAATTERGEPESG------FRSAAAKTFASDVAMSVTVDAVQLFG 345

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G+GY  +  + R  R++    I  G+   + + +   L +G
Sbjct: 346 GAGYTRDFPVERMLRDAKITQIYEGTNQILRMVMARHLLRG 386


>gi|229590492|ref|YP_002872611.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229362358|emb|CAY49260.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 382

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE + G++   + ++ + + DG + ++G K F+S+       ++  V     G+ G   
Sbjct: 126 LTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPDLGKKGISA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           FLVP         G    R ++K+G R++ T  +         +N  G     L ++   
Sbjct: 185 FLVPT-----HTPGFVVDRTEHKMGIRASDTCAVTLNQCTVPEANLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +AD+   + A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARDRVQFNKAIIEHQSVANLLADMQTQLNA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A      K    EA+ A++ A        +MA  V + AM+  GG GY+E+ 
Sbjct: 296 ARLLILHAARLRSAGKPCLSEASQAKLFAS-------EMAEKVCSSAMQIHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 349 PVERYYRDARITQIYEGT 366


>gi|254302099|ref|ZP_04969457.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322291|gb|EDK87541.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 31/273 (11%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG 254
           GLG   LTE   G+D +A  +   K  D  Y L+G K F+++  M+  + + A  +   G
Sbjct: 117 GLGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFITNGEMASFYCITAITDKEKG 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV----- 309
              +     +    GL     ++K+G R+        SNT   +L D  +    +     
Sbjct: 176 LKGISMFFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVVLEDCRIPASALVGKEG 227

Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E   I +  LD A   +  + V +A     EAI Y + R   G  +I    ++  IAD+ 
Sbjct: 228 EGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPVIKNQALQFKIADME 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    A  +        D      +E+A       I K +   +A  V +EA++  GG G
Sbjct: 288 IKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVSSEAIQIFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y  E  + +  R++    I  G+     + + N
Sbjct: 341 YSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|109098063|ref|XP_001096856.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Macaca mulatta]
          Length = 621

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A++ S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 180 LTEPASGSDAASVQSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGGG 292

Query: 308 PVEDMKILIYLDSAIMS-VSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ S V+GM   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSAVAGMLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y ++    R  R++
Sbjct: 406 YTKDYPYERILRDT 419


>gi|85706548|ref|ZP_01037641.1| cyclohexanecarboxyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85668960|gb|EAQ23828.1| cyclohexanecarboxyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 393

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 125/311 (40%), Gaps = 37/311 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
             MVA   +  +  +W PK+ S +               IGLGLTE RGG+D A +  + 
Sbjct: 94  GGMVAKHASKDIASEWVPKVVSGD-------------AVIGLGLTEPRGGSDAANLVLKA 140

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            K  +G + L+G K  +S +  +DA ++ A+  +   G   V     D +  G+      
Sbjct: 141 TKSGNG-WRLNGEKTSMSFASQADAAVVFARTGDPDGGSRGVSAFFVDLNQEGIKRTHF- 198

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMR 329
           + IG +      + F + F     ++ + + + G +    +  + LI L+     +   +
Sbjct: 199 DDIGTKPVGRGSVFFDDVFVPAESMMAEQDRAFGTIMAGFDYSRALIGLE----CLGAAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            S+ E   Y R R   G  ++    +   +A+    +     L F   +  D     + E
Sbjct: 255 ASVDETWAYVREREAFGAPIVQYQGVSFPLAEAETQLTMMRQLCFYTLDLRDRGLPHTSE 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA       + K++  K A  ++ + +   G  GY  +  +  H R +    + +G G A
Sbjct: 315 AA-------MCKWYLPKTACEILHQCLILHGHYGYTTD--LPHHQRYNDVLGLQIGDGTA 365

Query: 450 MVLDVLNLLEK 460
            +  ++   EK
Sbjct: 366 QIQKLVIAREK 376


>gi|84494643|ref|ZP_00993762.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384136|gb|EAQ00016.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 404

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 11/122 (9%)

Query: 335 AIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            I YA++R   G  I   Q +M R +AD+A  + A   +  + A   D  +    EA  A
Sbjct: 280 GITYAQQRETFGKQIAQHQAIMFR-LADMATKVEAGHQMMVKAARLKDSGERNDLEAGMA 338

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  KY   +    V+ ++    GG GY +E  I R YRE+P   +L+G G A +  
Sbjct: 339 -------KYLAAEYCADVVQQSFRIHGGYGYSKEYEIERLYREAPM--LLIGEGTAEIQK 389

Query: 454 VL 455
           ++
Sbjct: 390 MI 391


>gi|71005632|ref|XP_757482.1| hypothetical protein UM01335.1 [Ustilago maydis 521]
 gi|46096965|gb|EAK82198.1| hypothetical protein UM01335.1 [Ustilago maydis 521]
          Length = 451

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 43/255 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256
            GLTE   G+D +++ +      DG   L+G K W  +SP +  F++ A+   + ++  F
Sbjct: 190 FGLTEPNHGSDPSSMETTATDTGDGHIVLNGSKTWISNSPHAHVFVIWAKCKWDNKIRGF 249

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+  GL    +KNK+        +L  S T    + D+ V      D  +L 
Sbjct: 250 IV----EKGT-KGLSAPAIKNKL--------QLRASVTGSIFMQDVKVK----RDESLLP 292

Query: 317 Y-----------LDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +           L+SA   +S      +   +AEA  YA  R   G  +    ++++ +A
Sbjct: 293 HARPGLGSPFECLNSARYGISWGAMGALEACIAEARQYALDRSQFGRPIAAFQLIQQKLA 352

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D + + A     S +L    D         A++  M  + K   C  A       ++  G
Sbjct: 353 DASTEAALGLLCSLQLGRMKD-------SGAWSPEMVSLAKRNNCNKALQQSRSLLDIFG 405

Query: 421 GSGYIEERSIARHYR 435
           G+   +E    RH +
Sbjct: 406 GNATSDEYHTGRHVQ 420


>gi|218781750|ref|YP_002433068.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763134|gb|ACL05600.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 26/250 (10%)

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +RGG D+ A      K  D  + ++G K ++ +  ++  +I+L +        LV     
Sbjct: 128 QRGG-DLTAEAVTAVKEGD-EWVINGQKTYVPNGGLAGFYIVLCKTGDAASLILV----- 180

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILI 316
           +    GL  + L  K+G     T  + F       G L+G+    L  +     + KIL+
Sbjct: 181 EADRTGLSVEGLGRKLGGNMTPTANIAFDKVRVPAGNLVGEEGKGLAYAKEFTSENKILL 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++     +    + Y + R   G  L    V +  IAD+A+ I  +  ++++ 
Sbjct: 241 ----AAQALGTAFGAYDRMMEYVKGREQFGRKLAQFQVSQHKIADMAVKIELSALITYKA 296

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   DE K      + A++ A       C+ A  V A++++  GG G++ E  + R YR+
Sbjct: 297 AWVRDEGKMDPTLCSMAKMTA-------CRTAMEVSAQSIQLFGGYGFMTEYEVERSYRD 349

Query: 437 SPANSILLGS 446
           +    ++ G+
Sbjct: 350 AKTLEVMAGA 359


>gi|218778671|ref|YP_002429989.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760055|gb|ACL02521.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 481

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)

Query: 202 LTEKRGGTDIAAI--------TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR 252
           +TE   GTD+           +   QK+  G Y LSG K F+++  ++   I+   V+  
Sbjct: 163 ITEPGAGTDMEDARGMEAMRPSCHAQKVQGG-YSLSGVKCFITNGSLAHYVIVNMPVDPE 221

Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                +  F VP         G    R++ K G +++ T EL F   F   + D +V   
Sbjct: 222 HPLESMATFHVPT-----DAPGFSVGRVERKCGQKASQTAELFFDRVF---VPDADVWAQ 273

Query: 308 P---VEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           P    +  + ++ +    + + GM   R +L   I Y+  +    G LIDQ  ++ A+AD
Sbjct: 274 PGKGFDHTREILSITRGFVGLCGMGIARGALERCIRYSADKQTPQGRLIDQDWVRFALAD 333

Query: 362 IALDIAAATALSFRLANSFD 381
           +  D+    A ++  A + D
Sbjct: 334 MIKDLHMVRAAAYNFAMALD 353


>gi|149185350|ref|ZP_01863667.1| butyryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831461|gb|EDL49895.1| butyryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 47/252 (18%), Positives = 109/252 (43%), Gaps = 8/252 (3%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + ++E   GT +  ++++ ++  D        +W   +  +  +++  ++    G   
Sbjct: 122 VAVSMSEPDAGTALTDLSTRAREEGDQFILDGNKRWTSGAGHARYYVVYTRLSDAPGAKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  LL D    G+ +   +  +G R   T ++ F         +L V  G    +     
Sbjct: 182 IGALLVDKEMQGMSFGSREQLMGFRGIETRDITFDGV-KVPRENLIVPAGGFGKLMSAFG 240

Query: 318 LD---SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+   +A  S+     +L +A  Y + R   G  ++D   ++  +A++A+ + AA  L +
Sbjct: 241 LERCGNATQSLGLAAAALEQATEYVQERAAFGKPIVDFQAVQMRLAEMAMQVEAARLLIY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A + ++    +E+   +   +   K +  ++  +V A  M+ +GG GY +E  + +  
Sbjct: 301 RAAANSEQ----NEDGLPSVYESSTAKCYANEIVRSVTANGMQVMGGYGYHKEYGMEQRV 356

Query: 435 RESPANSILLGS 446
           R+  A  I  G+
Sbjct: 357 RDGFAWGIAGGT 368


>gi|126348455|emb|CAJ90178.1| putative acyl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
           23877]
          Length = 408

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALEYAQTREQFGRPIIDNQGIAFQLADMRTSIDAARLLVWRASWMAIN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R+S   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKKVTAQAVQILGGNGYTREYPVERMHRDSAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|21219719|ref|NP_625498.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256789196|ref|ZP_05527627.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289773089|ref|ZP_06532467.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|9716193|emb|CAC01491.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289703288|gb|EFD70717.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 408

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALEYAQTREQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRASWMAIN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R+S   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKKVTAQAVQILGGNGYTREYPVERMHRDSAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|170586870|ref|XP_001898202.1| 2-methyl branched-chain enoyl CoA reductase isoform I [Brugia
           malayi]
 gi|158594597|gb|EDP33181.1| 2-methyl branched-chain enoyl CoA reductase isoform I, putative
           [Brugia malayi]
          Length = 760

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 29/250 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--------VEGR 252
           +TE   G+D+ A  +  +K  D  Y ++G K W  +  +++ F +L +        V   
Sbjct: 149 VTESCAGSDVGATQTCCKK-KDDKYVINGSKMWITNGGVANWFFVLTRNDNDPKIPVSKA 207

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   + +  +G R++ T  + F +     +    +  GP E  
Sbjct: 208 FTAFVV-----DADTPGISIGKKEINMGQRASDTRAITFEDV---QVPKSQMIGGPGEGF 259

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D+    V+ +   LA     EA  YA  R   G  + +   +   +AD+A+++
Sbjct: 260 KIAMKTFDTTRPLVAAIATGLAARCLDEACKYALERKTFGTQIANNQGISFMLADMAINV 319

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  +++R   +++ A ++S  A+Y    + I K +    A    + A++  GG  Y  
Sbjct: 320 ELSRLITYR--GAWEVALAQSSPASY---YSSIAKCFAADTANIAASNAVQIFGGKNYFW 374

Query: 427 ERSIARHYRE 436
                R YR+
Sbjct: 375 LSDTQRKYRD 384



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D++ I  + +K  D  Y L+G K W      +  F +LA+ +       G+ 
Sbjct: 494 VTEPTAGSDVSGIKMKAEKKGDS-YVLNGTKAWITGGGPAKWFFVLARTDPNPKVQPGKA 552

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   R +  +G R + T  + F +    ++   N+   P    
Sbjct: 553 FTAFIV-----DGDTEGISRGRKEQNMGQRCSDTRTITFEDV---VVPMENILGTPGAGF 604

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D    +V+   V L+     EA  YA  R   G  +     +   +AD+A ++
Sbjct: 605 KVAMEAFDMTRPAVAAAAVGLSWRALDEACKYALERKAFGVPIAMNQGISFILADMAANL 664

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  +++R A +       S  A+ A+  A  T       A      A++  GG+G+ +
Sbjct: 665 ELARLITYRAAMAVSNKACFSYYASVAKCFAADT-------ANIAATNAVQIFGGNGFSK 717

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 718 EYPVEKLMRDAKIYQIYEGT 737


>gi|305667509|ref|YP_003863796.1| putative acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88709557|gb|EAR01790.1| probable acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 602

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 64/350 (18%), Positives = 142/350 (40%), Gaps = 75/350 (21%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A ++       ++  + P + S ++  T             + LTE + G+ ++ I
Sbjct: 130 TVGAAELITHFANQELNDTYVPNMLSGQWGGT-------------MCLTEPQAGSSLSDI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR------VGCFLVPR--- 260
            +      D  Y + G K F+S        +   ++LA+++G       +  F+VP+   
Sbjct: 177 VTSATLDGDS-YKIHGQKIFISGGDYQGAENIVHLVLARIKGAPAGTKGISLFVVPKKRP 235

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           + +D  PN +       K+G +   T  L F +     G+L+G+ N         K L Y
Sbjct: 236 IDDDLIPNDVTTVADFQKMGQKGYCTTHLFFGDKNDCQGWLVGEAN---------KGLKY 286

Query: 318 LDSAIMSVSGMRVSLAE------------AIHYARRR--------------HVSGGILID 351
           +    + ++G R+ +              +++YA  R              +    ++I+
Sbjct: 287 M---FLMMNGARIGVGRGAAAIATAAYHASLNYANERPQGRQLTRTGKKDVNQEQTLIIN 343

Query: 352 QP------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
            P      ++++A+++ +L +   TA    L+ +   A  R +      IM P+ K +  
Sbjct: 344 HPDVRRMLLLQKAVSEGSLSLVLLTAKYHDLSIASANADLREKYRLLLEIMTPVVKTYPS 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +M  + +   ++ +GG G+  +  + ++ R+    +I  G+      D+L
Sbjct: 404 EMGKSAVDNGVQVLGGYGFCSDYILQQYLRDIRIFAIYEGTTGIQSQDLL 453


>gi|332021483|gb|EGI61848.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 636

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 28/269 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ----------V 249
           LTE   G+D  +I S+  K +DG  Y L+G K W  +  +++   + AQ           
Sbjct: 198 LTEPTSGSDANSIRSRAIKSADGSHYILNGSKIWISNGGIAEIMTVFAQTPITDPKTGET 257

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN---ATVELEFSNTFGFLLGDLNVST 306
           + R+  F+V +    G  NG   +++  K  N +      V++   N  G       V+ 
Sbjct: 258 KDRITAFVVEKGF-GGITNGPPEKKMGIKCSNTAALFFEDVKIPAENVLGKEGEGFKVAM 316

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + + +  +   +A +S + MR  + +A+++A +R   G  L +   ++  +  +++  
Sbjct: 317 NILNNGRFGM---AACLSGT-MRYCINKAVNHATQRLQFGRTLDNYGTIQEKLGRMSILH 372

Query: 367 AAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
               +L++ +  + D  ++    EAA ++     + +W C        EA++ +GG G++
Sbjct: 373 YVTQSLAYMIPGNMDCGSQDYHLEAAISKCFGSDSAWWVCN-------EAIQILGGMGFM 425

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
           +E  + R  R+     I  G+ + + L V
Sbjct: 426 QETGLERVMRDLRIFPIFEGTNDILRLFV 454


>gi|311108119|ref|YP_003980972.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762808|gb|ADP18257.1| acyl-CoA dehydrogenase, middle domain protein 14 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 45/274 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA-----QVEGRVGC 255
           L+E   G+D A + ++ +++  G + ++G K ++++ P+ D  I+ A     +  G V C
Sbjct: 125 LSEPGIGSDAANVQTRVERMPSGGWRINGRKIYITNGPICDLGIVFARNVSGEGAGGVSC 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
            +     E G P   C      K+G       EL F         D+ V   P E++   
Sbjct: 185 LV----FESGMPGFSCSP--IGKMGMHCCPLGELLFE--------DVEV---PAENLIGE 227

Query: 313 --------KILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                   K  + +  ++++ + + +   SL  A+ +AR R   G  +    ++++ +AD
Sbjct: 228 PGQAFSIAKKYLNIGRSVVAFAALGIAESSLQAALRFAREREQFGRPIGGFQLVQQMVAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   +  +  L++R A++ D     +       ++  + K      A  V   A++  GG
Sbjct: 288 MMTQVETSRLLAYRSADALDRGLPDNA------VLCAMAKRHASDAALRVAELALQIHGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +GY     + RHYR+  A  + +G G   ++ +L
Sbjct: 342 AGYTSLFPVERHYRD--ARHLSIGEGTNQIIGLL 373


>gi|294811337|ref|ZP_06769980.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294323936|gb|EFG05579.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YAR R   G  ++D   +   +AD+   I AA  L +R   S+  
Sbjct: 285 MAVGTARAAYETALDYARTRTQFGRPIVDNQGVAFQLADMRTRIDAARLLVWRA--SWMA 342

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A  +   AA   +    +K +  + A  V A A++ +GG+GY  E  + R +R++   +I
Sbjct: 343 ATGKPFTAAEGSM----SKLYASETAKDVTARAIQILGGNGYTREYPVERMHRDAAIYTI 398

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 399 FEGTSEIQRLVIARTL 414


>gi|159460267|gb|ABW96553.1| acyl-CoA dehydrogenase [Streptomyces spiroverticillatus]
          Length = 373

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 18/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G +E   G+D+AA+T+       G   +SG K W  ++  +D  ++     G     +V
Sbjct: 110 VGFSEPGAGSDLAAMTTTITDGGSGELVVSGRKVWVTAAHYADLLVVFGGYRGGTTAVVV 169

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
           P         G+  +R+ +  G R+     L   +       +LG + +S  P+     L
Sbjct: 170 P-----ADTPGVRVERVPHPSGCRAAGHAGLVLDHVRVPADHMLGGVGLSF-PLVVTAAL 223

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            Y  +  A   V  +R  LA A+ +  RR   G  L    ++ R +A++ +    AT   
Sbjct: 224 TYGRMSVAWGCVGILRACLAAAVEHTGRREQFGTPLAGHQLVGRLLAELYVGEQIATRAC 283

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              + S+DE    + E A   + A   KY   + A A  + A++ +  +   +   +AR 
Sbjct: 284 EHASASWDEG---APEVAIDAVQA---KYVASREAAAGASRAVQLLASAAASDGHVVARA 337

Query: 434 YRESPANSILLGS 446
           YR++    I+ G+
Sbjct: 338 YRDAKLMEIIEGT 350


>gi|17570075|ref|NP_510789.1| Acyl CoA DeHydrogenase family member (acdh-7) [Caenorhabditis
           elegans]
 gi|3805665|gb|AAC69025.1| Acyl coa dehydrogenase protein 7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 412

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +TE   G+D+A + ++ +K  D  Y L+G K W  ++  ++ F +LA+ +       G  
Sbjct: 147 VTEPGAGSDVAGVKTKCEKKGDE-YILNGSKMWITNAGHANWFFVLARSDPDPKTAAGKA 205

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P GL   R +  +G R + T  + F +     +   NV   P E  K+ +
Sbjct: 206 FTAFVVEGDTP-GLTRGRKEINMGQRCSDTRGITFEDV---RVPAANVVGAPGEGFKVAM 261

Query: 317 -YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+ +   +A      A  Y+  R   G  + +   +   +A++A++   A 
Sbjct: 262 KTFDKTRPTVAALATGVAYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINCELAR 321

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++++     D  +  S  A+ A++ A  T       A      A++  GG+G+  E   
Sbjct: 322 LMTYKSGAEVDAGRPGSYYASIAKLFASDT-------ANQAATNAVQIFGGAGFNTEYPA 374

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 375 EKLMRDAKIFQIYEGT 390


>gi|34495232|gb|AAQ73463.1| acyl-CoA dehydrogenase [Rhodococcus sp. NCIMB 9784]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 31/265 (11%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR 252
           +   + +TE   G+D A + ++  +  D  + ++G+K F S    P +   +M    E +
Sbjct: 119 IKFSISITEPNAGSDAAGLRTRAVQDGDS-WIINGNKVFCSGAHLPGTVIAVMARTSEDK 177

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +   LVP   E     G+  ++L + I  RS  T E+ F++     +   N+   P 
Sbjct: 178 HKGLSMILVPNTTE-----GVDVRKL-DTIVRRSLGTTEIFFTDA---RVPVENIIGQPG 228

Query: 310 EDMKIL------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +   ++        L  A   V   R +L + I Y + R   G  L    V+K  +A+  
Sbjct: 229 DGWTVVGSHLEWERLSLAATYVGNARTALDDTIRYTKDRTQFGRPLSSFQVLKHRMAEDE 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  L +  A      +   +E + A++ A        K A  V    M+ +GG  
Sbjct: 289 CEVEAARLLVYSAATKLARGEKALKEVSMAKVFA-------AKTAFRVATNGMQALGGYA 341

Query: 424 YIEERSIARHYRESPANSILLGSGN 448
            + E  + R++RE  A   ++G G 
Sbjct: 342 TLPEYDMERYFRE--AKHGMVGGGT 364


>gi|326334196|ref|ZP_08200419.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325947987|gb|EGD40104.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 397

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 32/260 (12%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRVGCFLVP 259
           G+D++A++++  K +DG Y ++G K +L++  S   + +          V   +  FLV 
Sbjct: 135 GSDVSAVSTKATKQADGSYEITGQKMWLTNGGSSTLVAVLTKTDEGAESVYKNMTTFLVE 194

Query: 260 RLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD--LNVSTGPV 309
           +    G +  G+      +K+G +   T E+ F           G + G     +  G V
Sbjct: 195 KTPGFGETAQGVTVPGKIDKMGYKGIDTTEMIFEGHKISADQILGGVPGKGFFQMMDG-V 253

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           E  ++ +   +  +++ G  + +A    Y+++R   G  + +   +   +A++   +  +
Sbjct: 254 EVGRVNVAARACGLAIRGFELGIA----YSQQRQTFGKKIAEHQAILFRLAEMGTKVEVS 309

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  R A   D  K    EA  A+++A        + A  V+ ++    GG GY +E  
Sbjct: 310 HNMMVRAARLKDTGKRMDVEAGMAKMVA-------SEYANEVVEDSFRIHGGYGYSKEYE 362

Query: 430 IARHYRESPANSILLGSGNA 449
           I R  RE     +L+G G +
Sbjct: 363 IERLMRE--VKFMLIGEGTS 380


>gi|302524361|ref|ZP_07276703.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302433256|gb|EFL05072.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRV 253
           ++E   G+D+AAI ++ ++  D  Y + G K +L++  S   I L         +    +
Sbjct: 129 MSEPDLGSDVAAIKTRARRDGDD-YVIDGAKMWLTNGGSSNLIALLVKTDEGAEKAHQNL 187

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVE 310
             FLV  P    +  P GL      +K+G +   T E  F    GF +G   V    P +
Sbjct: 188 TTFLVEKPSGFGEVLP-GLTIPGKIDKMGYKGVDTTEAVFD---GFKIGAGKVLGEAPGK 243

Query: 311 DMKILI-YLDSAIMSVS----GMRV-SLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++  ++   ++V+    G+ + S   AI YA++R   G  +     +   +A++A 
Sbjct: 244 GFSYMMDGVEVGRVNVAARACGIAIRSFELAIAYAQQRSTFGKPIAQHQAIAFKLAEMAT 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D       EA  A+++A     +C +    V  EA    GG GY
Sbjct: 304 KVEAAHLMMVNAARLKDSGARNDVEAGMAKLIA---SEYCAE----VTQEAFRIHGGYGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 357 SKEYEIERLMREAP--FLLIGEGTSEI 381


>gi|295401852|ref|ZP_06811816.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111006|ref|YP_003989322.1| acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y4.1MC1]
 gi|294976106|gb|EFG51720.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216107|gb|ADP74711.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y4.1MC1]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 18/222 (8%)

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +G + +SG K F S +P  D FI+ A ++  G VG FL+P+     +  GL  ++  N +
Sbjct: 152 NGRWVISGRKTFTSLAPALDYFIISATIKETGEVGNFLIPK-----TAAGLKVEKTWNTL 206

Query: 280 G---NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G    RS+  +          L+  L+      +    L+++ +  + ++    +  EAI
Sbjct: 207 GMRATRSDDVILENVEVEEEALVEMLDSLKAKRQAQGWLLHIPACYLGIA--IAARNEAI 264

Query: 337 HYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            +A+    +     + + P ++R IA + + + AA    + +A+ +D      E+ A  +
Sbjct: 265 AFAKTYQPNSLSHPIAEVPEVRRKIAQMDIHLMAARHFMYSIADQWDRY---PEKRAEMK 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 KY     A  ++  AM  +GG        + R+YR+
Sbjct: 322 EELATVKYIATNAAVNIVDLAMRIVGGQSLFAANPLQRYYRD 363


>gi|256372533|ref|YP_003110357.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009117|gb|ACU54684.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 512

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 8/138 (5%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L +   +V  M  +LA+A  Y   R V G  L D  + +R +A +   +AAA A ++R A
Sbjct: 371 LQTVARAVGLMDAALAQARAYVANRRVFGRSLADYTLTRRKLARMVATVAAARAAAYRTA 430

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                      E     + A + K W C+ A  V  EA +  GG GY EE  ++R++ ++
Sbjct: 431 RHL--------ETPEGSLAASMAKAWSCRQAELVTREAQQLHGGMGYAEEYPVSRYFVDA 482

Query: 438 PANSILLGSGNAMVLDVL 455
              SI  G+   + L V+
Sbjct: 483 RVLSIFEGADETLSLRVI 500


>gi|297198653|ref|ZP_06916050.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
 gi|197714601|gb|EDY58635.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 390

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 25/263 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D  A+ +  +K  DG  + L+G K W  
Sbjct: 113 FGSEEQKQTWLPRMAAGEVIGCFGLTEPDHGSDPGAMRTFAKK--DGTDWVLNGRKMWIT 170

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +  ++   ++ AQ +  +  F+VP         G     +K+K   R++ T EL   +  
Sbjct: 171 NGSVAGVAVVWAQTDDGIRGFVVPT-----DTAGFSAPEIKHKWSLRASVTSELVLDDVR 225

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILI 350
                +L ++    GP   +  L +    I+  ++   R     A+ YA+ R   G  + 
Sbjct: 226 LPADAVLPEVVGLKGP---LSCLSHARYGIVWGAMGAARSCFETAVDYAKTREQFGRPIG 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + +  +AD+A+++     L+  L    D  + R E+ ++ ++         C+ A  
Sbjct: 283 GFQLTQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTART 342

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +       +G +G   E  + RH
Sbjct: 343 I-------LGANGISLEYPVMRH 358


>gi|118466232|ref|YP_880904.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254774498|ref|ZP_05216014.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118167519|gb|ABK68416.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 388

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 53/265 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------- 249
           G GLTE   G+D  A T    ++ DG + ++G K F+++  +D   ++            
Sbjct: 127 GFGLTEPGAGSDAGA-TRTTARLEDGEWVINGSKQFITNSGTDITSLVTVTAVTGTVGAD 185

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +  +   +VP     G+P G   + + +K+G  ++ T  L FS+       LLG     T
Sbjct: 186 KKEISTIIVP----SGTP-GFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARG--T 238

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    + IL    +  A ++    +  + E++ YA+ R   G     QP           
Sbjct: 239 GYANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFG-----QP----------- 282

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAY----ARIMA--------PITKYWCCKMAPAVI 412
            I +  A+SF++A    EA++     AY    A+++A         I K    + A    
Sbjct: 283 -IGSYQAISFKIARM--EARAHVARTAYYDAAAKMLAGKPFKKEAAIAKMIASEAAMDNA 339

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
            +A +  GG G++ E  +ARHYR+S
Sbjct: 340 RDATQIHGGYGFMNEYPVARHYRDS 364


>gi|254718242|ref|ZP_05180053.1| isovaleryl-CoA dehydrogenase [Brucella sp. 83/13]
          Length = 382

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELMFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERKQ-----FDQPIGEFQLMQGKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|41408410|ref|NP_961246.1| FadE19 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396766|gb|AAS04629.1| FadE19 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 388

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 53/265 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------- 249
           G GLTE   G+D  A T    ++ DG + ++G K F+++  +D   ++            
Sbjct: 127 GFGLTEPGAGSDAGA-TRTTARLEDGEWVINGSKQFITNSGTDITSLVTVTAVTGTVGAD 185

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +  +   +VP     G+P G   + + +K+G  ++ T  L FS+       LLG     T
Sbjct: 186 KKEISTIIVP----SGTP-GFTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARG--T 238

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    + IL    +  A ++    +  + E++ YA+ R   G     QP           
Sbjct: 239 GYANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFG-----QP----------- 282

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAY----ARIMA--------PITKYWCCKMAPAVI 412
            I +  A+SF++A    EA++     AY    A+++A         I K    + A    
Sbjct: 283 -IGSYQAISFKIARM--EARAHVARTAYYDAAAKMLAGKPFKKEAAIAKMIASEAAMDNA 339

Query: 413 AEAMECIGGSGYIEERSIARHYRES 437
            +A +  GG G++ E  +ARHYR+S
Sbjct: 340 RDATQIHGGYGFMNEYPVARHYRDS 364


>gi|329939781|ref|ZP_08289082.1| acyl-coa dehydrogenase RedW [Streptomyces griseoaurantiacus M045]
 gi|329301351|gb|EGG45246.1| acyl-coa dehydrogenase RedW [Streptomyces griseoaurantiacus M045]
          Length = 455

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 22/234 (9%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF-LV 258
           G+TE   G+D   + ++ ++  D  Y L+G K F + +P++D F++ A  E   G F L 
Sbjct: 163 GITEPEAGSDALRLRTRAERKGD-TYVLNGAKCFTTNAPVADVFLVQAATEPGGGFFGLT 221

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
             L+E G+P GL      +K+G R + T ++ F       S   G       V +  ++ 
Sbjct: 222 AFLVEAGTP-GLRVGAPYDKLGLRGSPTADVHFDGCEVPASQVLGAEGAGAAVFSASMKW 280

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++ ++     + +  MR  L     YA  R   G  +     +   I D+ L +  A +
Sbjct: 281 ERVCLF----AVYLGAMRRVLDSTTRYAGEREQFGSPIGGFQAVGHRIVDMTLRLEGARS 336

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L +R A     A+   +E A A     + K    + A  +  +A++  GG G +
Sbjct: 337 LLYRAAREL--ARGSEDEIAPA-----LAKLAVSEAAVQLGLDAVQIRGGLGMV 383


>gi|160899047|ref|YP_001564629.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364631|gb|ABX36244.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 407

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 20/265 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +   +I   LTE   G+D  A+ ++     D  Y L G K F+S SP +D  +++A 
Sbjct: 137 PVARAEKSICFALTEAAAGSDAGALETRAVLEGDH-YVLHGRKRFISGSPFADFAVLMAS 195

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGD---- 301
              EG     +    ++  +P        K   G  S   + L+        L+G+    
Sbjct: 196 TAPEGSPQREISAFFVDLHAPGVQVVSGYKTMAGQSSTGDIVLDGCRVPAAQLIGEPGRG 255

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L ++ G +   ++L     A++ ++  +V+L +A  YA  R   G  +     ++  +AD
Sbjct: 256 LALALGRITVNRLLHC--PAMLGLA--QVALRDARDYALGRQQFGRSIAQFQSIQHMLAD 311

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +  AA AL  + A + D           AR  A ++K +C + A  +   A++  GG
Sbjct: 312 MATEWMAARALMVQTARAIDAGID-------ARAQASMSKLFCSETAFRIADRAVQIHGG 364

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G ++ R +   +R      +L G+
Sbjct: 365 EGIVQGRRVEFLFRMLRMYRVLTGT 389


>gi|299069007|emb|CBJ40255.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244
           P   T  AIG   LTE   G++   + ++     DG + L+G K F++    + ++  F 
Sbjct: 112 PDLATGRAIGAFCLTEPHAGSEANNLRTRAVP-RDGHWVLTGSKQFVTNGARAQLAIVFA 170

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +     G+ G   F+VP         G    R ++K+G R++ T  +   +     + + 
Sbjct: 171 VTDPGAGKRGISAFIVPT-----DTPGFHVGRPEHKLGIRASDTCPITLEDC---AVPEA 222

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMK 356
           N+   P E +KI L  L+   + ++   V +A A   A       R   G  L +   + 
Sbjct: 223 NLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L    A      K    EA+ A       K +  ++A  + ++A+
Sbjct: 283 NMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYASELAEEICSKAI 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+ + ++ RHYR++    I  G+
Sbjct: 336 QIHGGYGYLTDYAVERHYRDARITQIYEGT 365


>gi|323525661|ref|YP_004227814.1| Acyl-CoA dehydrogenase [Burkholderia sp. CCGE1001]
 gi|323382663|gb|ADX54754.1| Acyl-CoA dehydrogenase [Burkholderia sp. CCGE1001]
          Length = 614

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 57/308 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           L+E + G+ ++ I ++ +   +      Y L G+K ++S    +       ++LA++ G 
Sbjct: 163 LSEPQAGSSLSDIATRAEYECESPFGAQYRLRGNKMWISGGEHELSENIVHLVLAKIPGP 222

Query: 253 VG----------CFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFS----- 292
            G           F+VP+ L +G+      N +    L +K+G+R      L F      
Sbjct: 223 DGKLMPGVNGISLFIVPKYLVNGAGACGEHNDVVLAGLNHKMGHRGTTNCLLNFGEGTKY 282

Query: 293 ------NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                    G+L+G+    L      + + +I + L +A +  +G       A+ YAR R
Sbjct: 283 RPAGAEGAIGYLVGEPGQGLACMFHMMNEARIGVGLGAATLGYTGY----LHALDYARNR 338

Query: 343 HVS-----GGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSE 388
                   GG         L++   ++R +         A AL+   A   DE ++ R +
Sbjct: 339 PQGRTAGPGGKNPASPQVKLVEHADIRRMLLAQKSYAEGALALNLYCAKLCDEERAGRDD 398

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+  
Sbjct: 399 AVLLLDLLTPIAKSWPSQWCLEGNSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTYG 458

Query: 449 AMVLDVLN 456
              LD+L 
Sbjct: 459 IQALDLLG 466


>gi|114765271|ref|ZP_01444403.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542406|gb|EAU45434.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 44/278 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P  K      + +TE   G+D AAI +      D  + L+G K F+S   ++D  I++A 
Sbjct: 113 PTVKGDKICAMAITEPGAGSDAAAIKTNAYLDGDE-WVLNGTKHFISDGDIADYVIVMAL 171

Query: 249 VE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
            +     R G  L+  +++ G P G    R +  +G+R     EL F +     G +LG+
Sbjct: 172 TDPEKGARGGISLL--IVDKGMP-GFTVARNQAMMGHRGYGHAELNFDDVRIPKGNVLGE 228

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMR--------VSLAEAIHYARRRHVSGGILIDQP 353
           +          K+++       +V G+R        V +A  +    R H +      QP
Sbjct: 229 VG------NGFKVMM------ANVGGIRLGHIGARAVGMASRVLDMMREHAATRKQFGQP 276

Query: 354 V-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +++ IAD A++I A   +    A   D      ++ +  ++ A        +M 
Sbjct: 277 IGDFQMVQQMIADSAMEIFATRMMVLNTAWEVDAGLDPRDKVSMVKVQA-------SEML 329

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             V    ++  GG G+ +E  + R YR++    I  G+
Sbjct: 330 GRVADRGIQVFGGYGFTKELPLERIYRDARVTRIYDGT 367


>gi|226364825|ref|YP_002782607.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243314|dbj|BAH53662.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 420

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 41/279 (14%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDI--AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
           AP+    +      +E    +D+  AA+T++    + G + L G K W  +S ++   ++
Sbjct: 143 APVVAGEIVGSFATSEPGASSDLSPAAVTTEATPTATG-WVLHGRKRWITNSAVASFVVV 201

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL 298
           LA+   R+  F+VP         G+       K+GN+   T       V L+  +  G  
Sbjct: 202 LARTGNRLSTFIVPT-----DTPGVTIGTPDRKLGNKGQITADVILDQVHLDADSLLGEE 256

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---RRHVSGGILIDQPVM 355
            G L ++      ++ L Y    I + +G+ ++ A   H A+   RRH  GG L  +   
Sbjct: 257 GGGLKIA------LQTLTYGRIGI-AAAGVGMAQAAFDHTAQHLARRHAFGGPLASKQHW 309

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAE 414
           +  +AD A  I +A  L  + A   D   +  E EAA A++          +++  +  +
Sbjct: 310 QFLMADRATAIESARDLYLKAALRLDSGIAFPEPEAAMAKLRG-------TEISVDMARD 362

Query: 415 AMECIGGSGYIE-------ERSIARHYRESPANSILLGS 446
           A++  GG G+ +       +  +   YR+S    I  G+
Sbjct: 363 AVQAFGGLGFTQSLGADDIDGPVEAFYRDSKIGEIYEGA 401


>gi|118468947|ref|YP_885076.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170234|gb|ABK71130.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 392

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L E   +A+ R V G  L +  ++   +AD A ++ AA  + + +A S D    R     
Sbjct: 257 LDETTAFAQTRIVDGKPLGNHQLVAGMLADSATELFAARTMLYEVARSIDAGLDRKTLHG 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K +C +MA      A++  GG GY+ E    R +RE     I  G+     
Sbjct: 317 ----QASMAKLYCSEMAGRAADRAVQVFGGRGYMRENVAERMFRELRVERIWEGASEIQR 372

Query: 452 LDVL-NLLEKG 461
           L V   L+ +G
Sbjct: 373 LIVARQLMNRG 383


>gi|313234476|emb|CBY24676.1| unnamed protein product [Oikopleura dioica]
          Length = 384

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 37/264 (14%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC---- 255
           G+TE   G+D++ + ++ +K+ D  + L+G K W  +  +++ + +LA+      C    
Sbjct: 123 GVTEPGAGSDVSGLKTKAEKVGDE-WVLNGEKMWITNGGVANWYFVLARTNPDPKCPSSK 181

Query: 256 ----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
               F+V R  E  +P      R +  +G R + T  + F N     + + NV     E 
Sbjct: 182 AFTGFIVEREWEGVNPG-----RKEINMGQRCSDTRGIRFENV---RVPEKNVIG---EV 230

Query: 312 MKILIYLDSAI--------MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            K  IY  +A          + +G+ + +L EA  Y+  R   G  ++    +   +A++
Sbjct: 231 GKGFIYAMAAFDNTRPPVAAAATGLSQRALDEATKYSFERKTMGKPIVQHQAISFLLAEM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A        ++++ A   D     +  A+ A++ A          A    ++A++  GG+
Sbjct: 291 ASRTELGRLMTYKSAWQVDTGNRNTFNASIAKLFA-------GDAANQNASDAVQIFGGN 343

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G+  E  + +  R++    I  G+
Sbjct: 344 GFNSEYPVEKLMRDAKIFQIYEGT 367


>gi|300697265|ref|YP_003747926.1| Butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299073989|emb|CBJ53526.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum
           CFBP2957]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 29/281 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E       P   T  AIG   LTE + G++   + ++   + DG + L+G K F++ 
Sbjct: 101 FGTEGQKARYLPDLATGRAIGAFCLTEPQAGSEANNLRTRA-VLRDGRWVLNGSKQFVTN 159

Query: 237 ---SPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              + ++  F +     G+ G   F+VP         G    R ++K+G R++ T  +  
Sbjct: 160 GARAKLAIVFAVTDPGAGKRGISAFIVPT-----DTPGFHVGRPEHKLGIRASDTCPITL 214

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVS 345
            +     +   N+   P E +KI L  L+   + ++   V +A A   A       R   
Sbjct: 215 EDC---AVPQANLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQF 271

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L +   +   +AD+A  + AA  L    A      K    EA+ A       K +  
Sbjct: 272 GKALREHQTIANMLADMATRLNAARLLVHHAARLRSLDKPCLSEASQA-------KLYAS 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++A  + ++A++  GG GY+ + ++ RHYR++    I  G+
Sbjct: 325 ELAEEICSKAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|120402855|ref|YP_952684.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955673|gb|ABM12678.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 401

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 19/251 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHK-WFLSSPMSDAFI 244
           P   +  AIG  GLTE   G++ A + ++ ++   G    + L+G K W  +  ++D   
Sbjct: 130 PQLASGEAIGCFGLTEPDFGSNPAGMRTRARRSGAGENADWVLNGTKMWITNGNLADVAT 189

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + AQ +  +  FLVP      +P G     +  K+  R++ T EL   N        L  
Sbjct: 190 VWAQTDEGIRGFLVP----TDTP-GFTANAIHRKLSLRASVTSELVLDNVRLPASAQLPD 244

Query: 305 STGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + G    +  L      I+  ++   R SL   I Y + R V    L    + +  +A++
Sbjct: 245 AVGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQTRDVFDKPLAGYQLTQEKLANM 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +++     L+  L    D    R E+ +  ++          + A A+  E    +GGS
Sbjct: 305 TVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNN-------VREAIAIARECRTLLGGS 357

Query: 423 GYIEERSIARH 433
           G   E S  RH
Sbjct: 358 GITLEYSPLRH 368


>gi|67900666|ref|XP_680589.1| hypothetical protein AN7320.2 [Aspergillus nidulans FGSC A4]
 gi|40742181|gb|EAA61371.1| hypothetical protein AN7320.2 [Aspergillus nidulans FGSC A4]
 gi|259483327|tpe|CBF78623.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 476

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 113/300 (37%), Gaps = 43/300 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + W PK+              K  +   LG+TE   G+D+A I +   + 
Sbjct: 174 IARFGTAEQRRRWLPKV-------------AKGEIRFCLGITEPDAGSDVANIRTTAVRQ 220

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +  Y ++G K ++++ +   +   A   G  G   +  L+      G+  +R+ N   N
Sbjct: 221 GE-YYVVNGSKKWITNGIWADYCTAAVRTGGPGRGGISLLVIPLKAEGVTRRRMHNSGVN 279

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            S+   E                             L  A  S+   RV   +A +YA +
Sbjct: 280 ASDFNPE----------------------------RLSLACASLRLARVCAEDAFNYATQ 311

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  LI +  ++  I    L I  A A   +L N  ++ K+   +      M  + K
Sbjct: 312 RSTFGAPLITRQAIQAKIFKFGLLIEPAYAFMEQLVNILEKTKNEPRDDVRIGGMTALLK 371

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLLEK 460
               +     + EA + +GG+GY      AR  + S  A   ++G G+  ++  L L E+
Sbjct: 372 VMSTRALEKSVREAQQILGGAGYNRAGKGARIEQISRDARVHVVGGGSEEIMMGLALQEE 431


>gi|331699244|ref|YP_004335483.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953933|gb|AEA27630.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 388

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 19/249 (7%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VG 254
           ++   LTE   GT +  ++++ ++  D  Y L G KW ++ S ++  F++LA+   R V 
Sbjct: 121 SLAFALTEPGNGTGMD-LSTRARRDGDE-YVLDGRKWLITNSDIASHFLVLAKTADREVS 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
             +VPR        G     L   +G +     EL F++       L+G        +E 
Sbjct: 179 AIIVPR-----DAPGFTIAPLPETMGCKGAEHGELTFTDVRVPAANLVGAEGEGIAHLER 233

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              +  +  A  S+     +L  ++ +A+ R   G  + ++  ++R +A++A D+ A   
Sbjct: 234 ALEISRVFIAASSLGTATRALDLSLRFAKERVTFGRPIGERQAIQRYLAEMATDVYALRG 293

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +   +A  +D  +    E++       + K +  +    V   A+   GG GY  +  I 
Sbjct: 294 MLADVAAKWDRDQRVPAESS-------LVKQFGLEAVGRVTDRALLVHGGIGYTRKYPIE 346

Query: 432 RHYRESPAN 440
           R YR++  N
Sbjct: 347 RLYRDARLN 355


>gi|310800730|gb|EFQ35623.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 443

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 24/254 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  +K SDG Y ++G K W   + ++   I+LA+ +    C   
Sbjct: 168 FGVTEPNSGLDTLRLATMAKKQSDGSYVVTGQKIWITCAQVASKMILLARTKAYEDCSKP 227

Query: 259 PRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              L       D S  GL  +++K K+G R+    E+ F +++      L    G  +  
Sbjct: 228 SEGLSLFCIDLDKSQPGLDMRKIK-KMGGRAVDANEV-FFDSYHIPATSLIGQEG--QGF 283

Query: 313 KILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366
           KI+++ +++    ++G  + L  A       +    ++ ++P+     +   +AD  + +
Sbjct: 284 KIILHGMNAERCLLAGEALGLGYAAIAKASAYARDRVVFNRPIGQNQSIAHPLADAYMKL 343

Query: 367 AAATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            AA   ++  A  +D ++     R ++   A   A   KY   + A      A+   GG 
Sbjct: 344 EAAKLATYHAARLYDASRDDPCIRQDQVGVA---ANSAKYVAAEAAFTACERAVLTHGGM 400

Query: 423 GYIEERSIARHYRE 436
           GY  E  + R+ RE
Sbjct: 401 GYAAEYDVERYLRE 414


>gi|300785754|ref|YP_003766045.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795268|gb|ADJ45643.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 379

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 18/251 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L LTE  G  D + +T++  + +DG + L+G K + L    +D  +++A+ +  +  F V
Sbjct: 129 LALTEPAGRWDESGVTTRAGRGADG-WRLTGTKTYVLDGHTADLLLVVARTDAGIALFAV 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E   P GL    L      R  A   L+F      L+G+   +   VE       +
Sbjct: 188 DTASE---PAGLRRTALPALDQTRKQA--RLDFDAVPARLVGEAGGAWPAVERTLAAAAV 242

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL---SFR 375
             A   + G   +L  A+ YA+ R   G  +     +K  +AD+  D+  A +      R
Sbjct: 243 LLAAEQLGGASRALELAVDYAKIREQYGRAIGSFQAVKHRLADMLTDVECARSAVQDGLR 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D  +  +         A + K +C ++   V A A++  GG G+  E     +++
Sbjct: 303 ALAGGDTTELLT--------AASVAKAFCSEVFTRVAAGAVQVHGGIGFTWEHPAQLYFK 354

Query: 436 ESPANSILLGS 446
            +  + +LLG+
Sbjct: 355 RAKGSEVLLGT 365


>gi|297616646|ref|YP_003701805.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144483|gb|ADI01240.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 379

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/286 (20%), Positives = 120/286 (41%), Gaps = 47/286 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML---AQVEGRVGC 255
              TE   G+D   IT+    + DG  + ++G K F+S+      ++L    Q  G++  
Sbjct: 122 FAFTEPGTGSDPKQITTTA--VRDGNHFVINGTKRFISNGTYPGPVVLFARDQENGKITA 179

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F+V +  E     G    +   K+G      V++   N             +G+ +    
Sbjct: 180 FIVEKFCE-----GYSVSKPWEKVGWHGGDLVDIYLKNVRIPAENVLGERGYGYPILQYG 234

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G +    I         ++  +  +  EA+ YA+ +   G  +     ++  IADIA
Sbjct: 235 IAFGKIGMNAI---------ALGTLLAAYEEAVTYAKEKTHRGEPIAKFQTIQLRIADIA 285

Query: 364 LDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +   A+  +++R   LAN   +    + EAA A+++     +   ++       A++  G
Sbjct: 286 MKYEASRWVAYRLGCLANQTKDYADFAREAAMAKVIVAENAFSATRI-------ALDIHG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             G + +  I+R YR++     ++G     V+D+  ++  G+ LF+
Sbjct: 339 SYGLMTDYKISRLYRDA-----VMGPQIEGVIDMQKIIVAGSILFK 379


>gi|240170893|ref|ZP_04749552.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 397

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 110/275 (40%), Gaps = 46/275 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRV 253
           ++E   G+D+AAI ++ ++   G Y + G K +L++  S   + +        A+    +
Sbjct: 129 MSEPELGSDVAAIRTRARRDPGGDYLIDGQKMWLTNGASSTLVAVLVRTDEGAAKPHRNL 188

Query: 254 GCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             FL+  P    + +P GL      +K+G +   T EL F                P +D
Sbjct: 189 TAFLIEKPTGFGEVAP-GLMIPGKIDKLGYKGIDTTELIFDGY-----------RAPADD 236

Query: 312 MKILIYLDSAIMSVSGM---RVSLAE------------AIHYARRRHVSGGILIDQPVMK 356
           +   +        + G+   RV++A             A+ YA++RH  G  + +   + 
Sbjct: 237 ILGRVPGQGFFQMMDGIEVGRVNVAARACGVAIRAFELAVRYAQQRHTFGKPIAEHQAIA 296

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A  + AA  +    A   D  +          + A + KY   +    V  ++ 
Sbjct: 297 FQLAEMATKVEAAHLMMVNAARLKDSGERND-------VAAGMAKYLASEYCSEVTQQSF 349

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              GG GY     I R  R++P   +L+G G + +
Sbjct: 350 RIHGGYGYSTAYEIERLMRDAP--FLLIGEGTSEI 382


>gi|15791260|ref|NP_281084.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10581893|gb|AAG20564.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 337

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P      A+G  GLTE   G++ +A+ +  +   D  Y L+G K W  +
Sbjct: 56  FGSEAQKERWLPALGAGEAVGCFGLTEPEHGSNPSAMETTAEPDGD-EYVLNGSKTWITN 114

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           SP++D  ++ A+  G  G  +   L+E    +G+    +  K+  R++ T E+   N   
Sbjct: 115 SPIADVAVVWARDHGEDGTPVRGFLVET-DRDGVTTNEIDEKLSLRASITGEISLRNVRV 173

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L  +    GP+  +    Y   A  +V   R     A  YA  R        DQP
Sbjct: 174 PAESRLPGVEGMKGPLSCLTQARY-GIAWGAVGAARNCFETAREYATDRE-----QFDQP 227

Query: 354 V-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      +  +A++A  I  +  L+ RLA   +    R +  + A       K    +MA
Sbjct: 228 IGGFQMQQDKLAEMATQITTSQLLAHRLAGLKERGDLRPQHVSMA-------KRNNVRMA 280

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
                 A E +GG+G   +    RH
Sbjct: 281 RDQARVAREMLGGNGITTDYPPMRH 305


>gi|302547271|ref|ZP_07299613.1| acyl-coenzyme A oxidase 4 [Streptomyces hygroscopicus ATCC 53653]
 gi|302464889|gb|EFL27982.1| acyl-coenzyme A oxidase 4 [Streptomyces himastatinicus ATCC 53653]
          Length = 405

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 27/250 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCF 256
             +TE  GG+D+A       +   G + L+G  KW  ++  +D  ++ A+   +  V  F
Sbjct: 147 FAMTEPLGGSDVAGGMRTTARREGGTWVLNGAKKWIGNATFADYVVVWARDVDDNHVKGF 206

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P G    +++NK+  R     E+  ++       D   + G   D+  ++
Sbjct: 207 VV----EKGTP-GFSPVKIENKLAFRIVENAEITLTDVR-VPEADRLQNIGSFRDVAEIL 260

Query: 317 YLDSAIMSVSGMRVSLAE---AIHYARRRHVSG----GILIDQPVMKRAIADIALDIAAA 369
                 ++   + V +     A+ YAR RH  G    G  + Q ++ +++ +I     A+
Sbjct: 261 RATRGGVAWQALGVMVGAYELALDYARERHQFGRPIGGFQLVQDLLVKSLGNIT----AS 316

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  +LA   D      E +A A       K +       V+A + E  GG+G + +  
Sbjct: 317 WGMLVQLARMQDAGIFHDEHSALA-------KAFVTARMREVVAWSREVFGGNGILLDHD 369

Query: 430 IARHYRESPA 439
           IAR + ++ A
Sbjct: 370 IARFFADAEA 379


>gi|154244141|ref|YP_001415099.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158226|gb|ABS65442.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 404

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 27/290 (9%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIM 245
           AP+   +V     +TE    GG+D   + ++ +K  +G Y + G KWF++     A  I+
Sbjct: 120 APIASGAVRSAFVMTEPHPGGGSDPGMMLTRAEKQPNGSYRIYGRKWFITGAEEAAHLIL 179

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD 301
           +A+        L        +P     +R+            ELEF          LLG+
Sbjct: 180 IARTSDDPRTGLTAFAFHRDAPGWRIVRRIPIMGPEEHGGHCELEFDGLEIPPEDVLLGE 239

Query: 302 ------LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                   +  GP      + +L  A+  V   R        YA  R+  G  L D+  +
Sbjct: 240 GKGLRVTQIRLGPARLTHCMRWLGLAMRCVEIARA-------YADVRYGFGVRLADRESV 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +  IA+DI  +  L+ + A   D      +E + A+I A  T +            A
Sbjct: 293 QTLLGRIAMDIEISRLLTMKAAWELDRGGLARKEVSMAKIKAANTLHLAAD-------SA 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ++  G  GY ++  +   YR +    ++ G+     + +   LEK    F
Sbjct: 346 IQINGARGYSKDTVLEWIYRYARQARLVDGADAVHEMVLNRFLEKEEGAF 395


>gi|297198029|ref|ZP_06915426.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197717577|gb|EDY61611.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 408

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRASWMAIN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKQ------FTAAEGSMSKLFASETAKTVTAQAVQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|169237018|ref|YP_001690218.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167728084|emb|CAP14872.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 387

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P      A+G  GLTE   G++ +A+ +  +   D  Y L+G K W  +
Sbjct: 106 FGSEAQKERWLPALGAGEAVGCFGLTEPEHGSNPSAMETTAEPDGD-EYVLNGSKTWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
           SP++D  ++ A+  G  G  +   L+E    +G+    +  K+  R++ T E+   N   
Sbjct: 165 SPIADVAVVWARDHGEDGTPVRGFLVET-DRDGVTTNEIDEKLSLRASITGEISLRNVRV 223

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L  +    GP+  +    Y   A  +V   R     A  YA  R        DQP
Sbjct: 224 PAESRLPGVEGMKGPLSCLTQARY-GIAWGAVGAARNCFETAREYATDRE-----QFDQP 277

Query: 354 V-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      +  +A++A  I  +  L+ RLA   +    R +  + A       K    +MA
Sbjct: 278 IGGFQMQQDKLAEMATQITTSQLLAHRLAGLKERGDLRPQHVSMA-------KRNNVRMA 330

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
                 A E +GG+G   +    RH
Sbjct: 331 RDQARVAREMLGGNGITTDYPPMRH 355


>gi|148265079|ref|YP_001231785.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398579|gb|ABQ27212.1| butyryl-CoA dehydrogenase [Geobacter uraniireducens Rf4]
          Length = 402

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 122/288 (42%), Gaps = 19/288 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T   IG   LTE   G+D  AI++  ++  +  + ++G K F+++
Sbjct: 124 FGTEEQKQKWLPALNTGEIIGCFLLTEPDAGSDAGAISTTYKRDGND-FVINGSKIFITN 182

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  ++ A  +  +    V   + D    G+   + + K+G R + T      N   
Sbjct: 183 GGYKGTGVLFATHDKSLKHKGVSAFIIDLQSPGVEILKNEKKLGIRGSYTTAFALDNV-- 240

Query: 297 FLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             +   N+     +  KI +  L+   + ++   + +AE     A+ Y++ R   G  + 
Sbjct: 241 -RIPAENLLGQEGQGFKIAMDTLNGGRIGIASQALGIAEGAFERALAYSKERKQFGAPIC 299

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+   I  +  ++++ A   D  KS + E+A  +++A        + A  
Sbjct: 300 DLQAIQFKLADMWARIETSKLMTYKAACLKDAKKSYTMESAMCKMLA-------SEAATY 352

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           V  EA++  GG G+I +  + R YR++    I  G+     + +  +L
Sbjct: 353 VTKEAIQIHGGYGFIVDYEVERMYRDAKITEIYEGTNEVQRVVISKML 400


>gi|254393359|ref|ZP_05008505.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326439930|ref|ZP_08214664.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|197706992|gb|EDY52804.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 410

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YAR R   G  ++D   +   +AD+   I AA  L +R   S+  
Sbjct: 275 MAVGTARAAYETALDYARTRTQFGRPIVDNQGVAFQLADMRTRIDAARLLVWRA--SWMA 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A  +   AA   +    +K +  + A  V A A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 ATGKPFTAAEGSM----SKLYASETAKDVTARAIQILGGNGYTREYPVERMHRDAAIYTI 388

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 389 FEGTSEIQRLVIARTL 404


>gi|53721653|ref|YP_110638.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76817780|ref|YP_337329.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126457593|ref|YP_001074862.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134279074|ref|ZP_01765787.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167848803|ref|ZP_02474311.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|242314082|ref|ZP_04813099.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254263831|ref|ZP_04954696.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254299885|ref|ZP_04967333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52212067|emb|CAH38074.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76582253|gb|ABA51727.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126231361|gb|ABN94774.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134249493|gb|EBA49574.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157809787|gb|EDO86957.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|242137321|gb|EES23724.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254214833|gb|EET04218.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP         G    + + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TRINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLADYEVERHYRDARITQIYEGT 365


>gi|72162398|ref|YP_290055.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71916130|gb|AAZ56032.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 391

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 94/252 (37%), Gaps = 41/252 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGRVG 254
           +TE   G+D  AI ++  K  D  + ++G K F++      F M+  V        G V 
Sbjct: 130 ITEPGAGSDAKAIRTRAYKDGDH-WVINGEKTFITGGNEADFAMVFAVTDPEKGANGGVT 188

Query: 255 CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           CFLV R           + +  P  L +              V +  SN  G +     +
Sbjct: 189 CFLVDREAGWRSEPIPTMGEWGPASLVFD------------NVRVPESNVLGEVGKGFEL 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   +   + L+       ++      L+ AI YA  R   G  L ++  ++  IAD  +
Sbjct: 237 AMKWIGRGRYLL----PARALGACERLLSMAIDYANTRETFGKPLAERQAIQWMIADSQV 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I A   L    A   D  +        +R    I K +    A  ++   ++  GG GY
Sbjct: 293 EIEALRLLVLHAAWQVDNGRD-------SRHAQSIAKLYGGVKANEIVDRVLQIHGGMGY 345

Query: 425 IEERSIARHYRE 436
             E  I R YRE
Sbjct: 346 TRELPIERWYRE 357


>gi|318080703|ref|ZP_07988035.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 218

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 22/204 (10%)

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG----- 307
           F +  L+ D    G    R  +K+G +++ T EL F++       LLG+ N         
Sbjct: 18  FGISLLVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVKVPVADLLGEENKGFAYLGQN 77

Query: 308 -PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            P E + I      A+ + +    ++  A  Y + R V G  +      K  +A    ++
Sbjct: 78  LPQERLGI------AVGAYAQAAAAVRFAQQYVQDRTVFGKPVAAFQNTKFELAACKAEV 131

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+  R   + D+ +  + EAA A++       +C ++A  VI   ++  GG GY+ 
Sbjct: 132 DAAEAVCDRALEAHDKGELTAAEAASAKL-------FCTEVASRVIDRCLQLHGGYGYMN 184

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR Y ++  N I  G+   M
Sbjct: 185 EYPIARLYADNRVNRIYGGTSEVM 208


>gi|126513537|gb|ABO15874.1| acyl-CoA dehydrogenase [Streptomyces sp. UC 11065]
          Length = 379

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 26/261 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           G  +TE   G+D++ ++    + +DG + L+G K F+S+ P +D +   A  + + G F 
Sbjct: 122 GNAMTEADAGSDVSKLSVTATR-ADGGWVLNGEKSFVSNGPAADVYTTYATTDPKAGPFG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V   + + S  G+      +K+G        + F +TF   + D NV   P +   I  +
Sbjct: 181 VTGFIVERSAPGVTASEPFDKMGLLQCPAGSVRFEDTF---VPDENVLGEPGQGGWIFQH 237

Query: 318 -LDSAIMSVSGMRVSLAEAI------HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +      +    V LA+ +      H   RR     +   Q V  R IAD+ L + +A 
Sbjct: 238 SMGWERACLFAGYVGLADRVLESCVAHVKGRRQFGKRLSEFQAVSHR-IADMKLRLESAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEE 427
            L +R     DE    +   A +++           ++  V+A A++ +   GG GY   
Sbjct: 297 LLLYRACWEMDEGLPATLSIALSKL----------AVSEGVVASALDAVRLFGGRGYQRA 346

Query: 428 RSIARHYRESPANSILLGSGN 448
             I    R++  + I  G+ +
Sbjct: 347 DRIEAALRDAVPSVIFSGTSD 367


>gi|330824458|ref|YP_004387761.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309830|gb|AEB84245.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 379

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 126/289 (43%), Gaps = 25/289 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235
           K  +RE          K  +   + ++E   G+D A   ++ ++  +G + ++G K W  
Sbjct: 99  KFGTREQQERFLPAFMKGDIRFSISISEPSAGSDAANTRTRSEETPEG-WRITGQKLWCS 157

Query: 236 SSPMSDAFIMLAQVEGRVGCF---LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +   +  I +     +       L   L+ + +P GL  +RL   +  R+  T E+ F+
Sbjct: 158 GAAARNTVIAMLTRSDKAAAKHKGLTVLLVPNDTP-GLDIRRLPT-MARRATGTTEI-FA 214

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRV-----SLAEAIHYARRRHVSG 346
           +  G ++   N+   P +  KI+  +L+   ++VS   V     ++++A+ YA  R    
Sbjct: 215 D--GAVVPPANLLGQPGDGWKIITDHLELERIAVSAAYVGNAQQAVSDALKYAHERIQFD 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D  V++  +AD+   + AA  + +R A+     +    E + A+++A  T      
Sbjct: 273 KPIYDFQVIRHMLADMQTAVDAARLMVYRAADMASRGEPCQREVSMAKLIASET------ 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
               V    M+ +GG   + E  + R++RE   ++I  G G + +   L
Sbjct: 327 -LQTVTRNGMQILGGHSMLPEADMERYFREGMQSTI--GGGTSQIQRTL 372


>gi|218196154|gb|EEC78581.1| hypothetical protein OsI_18581 [Oryza sativa Indica Group]
          Length = 430

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +   +D  I+LA+     ++  F+V 
Sbjct: 166 LTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQLNGFIVK 225

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
           +    G+P GL   +++NKIG R     ++  +  F   + D +  TG    +D+  ++ 
Sbjct: 226 K----GAP-GLKCTKIENKIGLRMVQNADIVLNKVF---VPDEDRLTGINSFQDINKVLA 277

Query: 318 LDSAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++   + +S+   +  H Y + R   G  L    + +  +  +  +I A   + +
Sbjct: 278 MSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGW 337

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  K     A+       + K W  K A  V++   E +GG+G + +  +A+ +
Sbjct: 338 RLCKLYESGKMTPGHAS-------LGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAF 390


>gi|300785761|ref|YP_003766052.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795275|gb|ADJ45650.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 383

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 25/260 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + +GL+E   G+D AA+ +  +   D         W   + +    I      G      
Sbjct: 121 LAVGLSEPDSGSDAAALRTTAEDAGDHFVVRGQKAWCTGAGLPGTTIATYVRTG------ 174

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPV-EDM 312
            PR  +    + L        +  R   T+      T     GD+ V      GPV E  
Sbjct: 175 -PREPKHSGISLLLIDPSSPGVEVRRTPTLARHILGTNEVFFGDVAVPKENLVGPVDEGW 233

Query: 313 KIL---IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K++   I L+  I++   +   + +L E + +AR R   G  +     +  AIAD+  +I
Sbjct: 234 KVMLSNIELEKVIITGGYLGAAQATLDEMLEFARTRQAFGRPVGTFQAIAHAIADLQTEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L++R A    + K  S E + A++    T     ++        M+   G G+  
Sbjct: 294 DSARLLAYRAAWLLAQGKPCSREGSMAKLKGSETYVAAARL-------GMQVCAGHGFST 346

Query: 427 ERSIARHYRESPANSILLGS 446
           E  ++  YRES   +I  G+
Sbjct: 347 ESVMSFRYRESIVATISGGT 366


>gi|281354379|gb|EFB29963.1| hypothetical protein PANDA_005101 [Ailuropoda melanoleuca]
          Length = 396

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 45/258 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I ++ ++  D  Y ++G K W  +   ++ + +LA+ +      L P+
Sbjct: 157 VTEPVAGSDVAGIKTKAERKGDE-YIINGQKMWITNGGKANWYFLLARSD------LDPK 209

Query: 261 ----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVS 305
                     ++E  +P G+   R +  +G R         S+T G +  D+     NV 
Sbjct: 210 APANRAFTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVRVPKENVL 260

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
            G     KI +   D     V+   V LA     EA  YA  R   G +L++   +   +
Sbjct: 261 IGEGAGFKIAMQAFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQGISFLL 320

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ +  A     R A   D  +  +         A I K +   +A  +  +A++  
Sbjct: 321 AEMAMKVEIARLSYQRAAWEVDSGRRNT-------YYASIAKAFAADIANQLATDAVQIF 373

Query: 420 GGSGYIEERSIARHYRES 437
           GG+G+  E  + +  R++
Sbjct: 374 GGNGFNTEYPVEKLMRDA 391


>gi|115462277|ref|NP_001054738.1| Os05g0163700 [Oryza sativa Japonica Group]
 gi|46981342|gb|AAT07660.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113578289|dbj|BAF16652.1| Os05g0163700 [Oryza sativa Japonica Group]
 gi|215701132|dbj|BAG92556.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630308|gb|EEE62440.1| hypothetical protein OsJ_17232 [Oryza sativa Japonica Group]
          Length = 430

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +   +D  I+LA+     ++  F+V 
Sbjct: 166 LTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQLNGFIVK 225

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
           +    G+P GL   +++NKIG R     ++  +  F   + D +  TG    +D+  ++ 
Sbjct: 226 K----GAP-GLKCTKIENKIGLRMVQNADIVLNKVF---VPDEDRLTGINSFQDINKVLA 277

Query: 318 LDSAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++   + +S+   +  H Y + R   G  L    + +  +  +  +I A   + +
Sbjct: 278 MSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGW 337

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  K     A+       + K W  K A  V++   E +GG+G + +  +A+ +
Sbjct: 338 RLCKLYESGKMTPGHAS-------LGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAF 390


>gi|83941545|ref|ZP_00954007.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83847365|gb|EAP85240.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 561

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 43/302 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P+I S E  PT          A+    TE   G
Sbjct: 257 GSLGTRSEIAAELIIAGGTDAQKEKWLPRIASAETLPT----------AV---FTEPNTG 303

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  D  Y ++G+K W   +  +    +LA+ + +      +  FL  + 
Sbjct: 304 SDLGSLRTRAVKDGDD-YKITGNKTWITHAARTHVMTLLARTDPQTSNYKGLSMFLAEKT 362

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
             +D +P    G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 363 PGDDANPFPSEGMTGGEIE-VLGYRGMKEYELGFD---GFHVKGENLLGGEEGKGFKQLM 418

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A+     ++ YA  R   G  LI+ P +   +A +A++I  A 
Sbjct: 419 ETFESARIQTAARAIGVAQSALDISMQYAIDRKQFGKSLINFPRVSSKLAMMAVEIMIAR 478

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 479 QLTYFSAFEKDEGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 531

Query: 431 AR 432
           +R
Sbjct: 532 SR 533


>gi|332373548|gb|AEE61915.1| unknown [Dendroctonus ponderosae]
          Length = 188

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 28/199 (14%)

Query: 274 RLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYLDSA 321
           RL++K+G R+++T +    N              GFL     ++   +E  ++ I    A
Sbjct: 3   RLEDKMGIRASSTCDFHLENVCVPKDNLIGKTGDGFL-----IAMKQLEKARVGI----A 53

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +L  A+ Y+  R   G  L     +K  +A++A  + AA  L +R A   D
Sbjct: 54  SQALGIGQAALELAVQYSSERKAFGHPLNQLQAVKLRLAEMATKLEAARLLVWRAAAILD 113

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +  ++  + A++ A        + A  V   A++ +GG GYI++    R+YR++    
Sbjct: 114 EGERATKYTSMAKLAAS-------EAATFVSHGAIQILGGMGYIKDMPAERYYRDARITE 166

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G  +   L + +++ K
Sbjct: 167 IYAGVNDVQKLLIADMVIK 185


>gi|254819183|ref|ZP_05224184.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 400

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 32/256 (12%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-- 252
           V     LTE   G++ A + ++  +  D  + +SG K F++ +P+++ F++ A+      
Sbjct: 127 VVASFALTEPGAGSNPAGLRTKAVRDGDN-WVISGQKRFITNAPVANLFVVFARTRPADD 185

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  FLVP         G+       K+G     T ++ F +    +  D     G 
Sbjct: 186 KGPGIAVFLVP-----ADAAGVQVGAKDAKMGQEGAWTADVAFDD----VRVDDAALIGG 236

Query: 309 VEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            ED+     + S        A ++V   + +L E++ YA      G  +    +++  +A
Sbjct: 237 SEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVAYAATATQGGAEIGSFQLVQAMLA 296

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D    + A  AL    A  +   + R       RI     K +C +MA  V   A++  G
Sbjct: 297 DQQAGVMAGRALVRDAARLWVTDQDR-------RIAPSAAKLFCTEMAGNVADLAVQIHG 349

Query: 421 GSGYIEERSIARHYRE 436
           GSGY+   ++ R YR+
Sbjct: 350 GSGYMRGVAVERIYRD 365


>gi|225175895|ref|ZP_03729887.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168483|gb|EEG77285.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 208

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 9/180 (5%)

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R      L F + F     LLG+ N +      M I   L SA  ++   + +L  A
Sbjct: 1   MGTRGGGAGRLVFRDAFVPEENLLGEENGAGAIFYQMMIPERLTSAAGALGMGQAALDVA 60

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y+R+R   G  + +   +   +A+    + AA ++ +  A   D     +  AA  R 
Sbjct: 61  VKYSRKRKAFGQPIKNFQAVSFKVAESITQLDAARSMIYATARCVDT----NTPAALQRR 116

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M    K +C   A  V+  AM+ +GG GY     + R  R+     I++ +G   ++D++
Sbjct: 117 MVSQAKKFCTDTAWEVVNHAMQILGGIGYTNVYPVERLLRD--IRLIMIWTGTNEIMDLI 174


>gi|226365863|ref|YP_002783646.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244353|dbj|BAH54701.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 401

 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML----AQVEGR-- 252
           + +TE   G+D AA+T+    + DG  Y L+G K F+++      I++     + +GR  
Sbjct: 131 MAITEPGFGSDSAAVTTTA--VLDGDEYVLNGEKIFVTAGERSTHIVVWATVDKTKGRAA 188

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTG 307
           +  F+VPR        GL   RL++K+G +++ T  L   +       LLG  ++NV  G
Sbjct: 189 IKSFVVPR-----DAPGLSVARLEHKLGVKASDTAVLLLQDCRIPKDNLLGTPEVNVEKG 243

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI--DQPVMKRAIA---- 360
               M+     D+    V+GM V L  A     R  +S  G+ I  D P   +  A    
Sbjct: 244 FAGVMQTF---DNTRPIVAGMAVGLGRAALEELRAILSDAGVEISYDTPAYNQHAAAAEF 300

Query: 361 -DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  AA  L+ R     D  K  S EA+ ++  A        +   A+  +A+E  
Sbjct: 301 LQLEADWEAAYLLALRATWMADNKKPNSLEASMSKAKA-------GRTGTAISLKAVELA 353

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G  GY E   + +  R+S    I  G+
Sbjct: 354 GTLGYSERPLLEKWARDSKILDIFEGT 380


>gi|330898778|gb|EGH30197.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 286

 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D  A+ ++ + +  G Y LSG K W  +SP++D F++ A+ + G +  F 
Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              +LE G   GL    +  K+G R++ T E+   N F
Sbjct: 195 ---VLEKGW-AGLSAPAIHGKVGLRASITGEIVMDNVF 228


>gi|315445458|ref|YP_004078337.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263761|gb|ADU00503.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 402

 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 19/251 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHK-WFLSSPMSDAFI 244
           P   +  AIG  GLTE   G++ A + ++ ++   G    + L+G K W  +  ++D   
Sbjct: 131 PRLASGDAIGCFGLTEPDFGSNPAGMRTRAKRDGSGENADWILNGTKMWITNGNLADVAT 190

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + AQ +  +  FLVP      +P G     +  K+  R++ T EL   N        L  
Sbjct: 191 VWAQTDEGIRGFLVP----TDTP-GFTANAIHRKLSLRASITSELVLDNVRLPASAQLPE 245

Query: 305 STGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + G    +  L      I+  ++   R SL   I Y + R V    L    + +  +A++
Sbjct: 246 AVGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQTREVFDRPLAGYQLTQEKLANM 305

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +++     L+  L    D    R E+ +  ++          + A A+  E    +GGS
Sbjct: 306 TVELGKGMLLAIHLGRIKDAEGVRPEQVSLGKLNN-------VREAIAIARECRTLLGGS 358

Query: 423 GYIEERSIARH 433
           G   E S  RH
Sbjct: 359 GITLEYSPLRH 369


>gi|161338484|emb|CAO03071.1| MasA protein [Azoarcus sp. HxN1]
          Length = 379

 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 21/261 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR---- 252
           + + +TE   G+D+A + +   +  D  + L+G K F+S+ + SD  I+ A+        
Sbjct: 122 LAIAMTEPGAGSDLAGMKTTAVEKEDH-FLLNGSKTFISNGLLSDLVIVAAKTASDTRHA 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           +G F++ R +E     G    R   K+G RS  T EL F+N       LLG+       +
Sbjct: 181 IGLFMLERGME-----GFERGRKLEKLGMRSQDTAELFFNNVKVPKTNLLGEKTKGFHIL 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M +   +  A  +V+    +L     Y  +R+  G  +      +  +A++  +I  A
Sbjct: 236 MQMLVHERVTLACSAVALSSAALKMTKEYVEQRNAFGSQVSKFQNTRFKLAEMKTEIDIA 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +     +  +  +  A  A++       +C ++   V  + ++  GG GY+ E  
Sbjct: 296 QVFVDKCVMDLNNRELSAASACEAKL-------FCSELLTRVADQCVQLHGGYGYMWEYP 348

Query: 430 IARHYRESPANSILLGSGNAM 450
           I + Y  +    I  G+   M
Sbjct: 349 ITQLYATARIYPIFAGTSEMM 369


>gi|90075810|dbj|BAE87585.1| unnamed protein product [Macaca fascicularis]
          Length = 563

 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A++ S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 180 LTEPASGSDAASVQSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGGG 292

Query: 308 PVEDMKILIYLDSAIMS-VSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ S V+GM   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSAVAGMLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y ++    R  R++
Sbjct: 406 YTKDYPYERILRDT 419


>gi|332671061|ref|YP_004454069.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
 gi|332340099|gb|AEE46682.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
          Length = 391

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 47/297 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA---------QVE 250
            GLTE   G+D A  T    ++ DG + + G K F+++  +    +L          + +
Sbjct: 123 FGLTEADAGSD-AGGTRTTARLEDGEWVIDGSKQFITNSGTRITRLLTITAVTGERVRDD 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLN 303
           G     L   L+  G+P GL      +K+G  ++ T  L F       +N  G       
Sbjct: 182 GTRTKELTAILVPAGTP-GLTVLPAYDKVGWHTSDTHPLRFEDLRVPEANLLGTRGRGFA 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +++ ++ I    A +     +  L EA+ YAR R+V G  + +   +   IA + 
Sbjct: 241 QFIQALDEGRVAI----AALCTGAAQGCLEEAMRYARSRNVFGHPIGENQHIAFKIARME 296

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA     RLA  + +A  R       ++ A + K    + A     +A +  GG G
Sbjct: 297 SRVHAA-----RLA--WQDAARRLVAGQPFKLEASLAKLLGSEAAMDNARDATQIFGGYG 349

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
            + E ++ARHYR+S                   +LE G    E     + ++LG SG
Sbjct: 350 VLNENAVARHYRDS------------------KILEIGEGTTEVQLMVIARELGFSG 388


>gi|56475808|ref|YP_157397.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56311851|emb|CAI06496.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 392

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 10/239 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA+    ++  D  Y + G K W  +  ++D +++ A+     G   +
Sbjct: 130 FALSEPGSGSDVAAMACSARQDGDE-YVIDGEKTWISNGGIADFYVVFARTGEAAGSRGL 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + D    GL      + I     A +           L  +      V    + I+ 
Sbjct: 189 SAFIVDADRPGLEIAERIDVIAPHPLARLRFRECRVPKSCLLGVPGQGFKVAMQTLDIFR 248

Query: 319 DSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            S   +  G  R +L EA+  A  R + G  L D  + +  +A +A  +  +  L++R A
Sbjct: 249 TSVAAAALGFARRALDEALKRATTRDMFGQKLADFQITQAKLAQMATAVDTSALLTYRAA 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              D+ ++ +  AA A++ +  T       A  VI  A++  GG G + +  + R YRE
Sbjct: 309 WLRDQGQTITGAAAMAKMTSTET-------AQQVIDAAVQMWGGCGVVSDHPVERLYRE 360


>gi|296269835|ref|YP_003652467.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092622|gb|ADG88574.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 403

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 51/307 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG--QKISD 223
           TP    +W P++F    D           V +G    +E   G+D+ AI ++    +  D
Sbjct: 103 TPEQMGEWLPEMFGSPGD-----------VKLGAFCASEPDAGSDVGAIRTRAVYDEAKD 151

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K W  +  +++  +++A V+  +G      F+VP         GL   +   
Sbjct: 152 -EWVLNGVKTWATNGGIANVHVIVASVDPSLGARGQASFVVPP-----GTKGLSQGQKFK 205

Query: 278 KIGNRSNATVELEFSNT---FGFLLGD--------LNVSTGP-VEDMKILIYLDSAIMSV 325
           K G R++ T E+   N       LLG           V  G        +   ++    V
Sbjct: 206 KHGIRASHTAEVILDNVRVPGRCLLGGKEKLDERLARVRAGQRAGGQAAMRTFETTRPQV 265

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + M V +A A +     YA+ R   G  + +   +   +AD+A  I  A  +++R A   
Sbjct: 266 AAMAVGIARAAYEYARDYAKEREQFGRKIGENQAIAFLLADMAARIDMARLMTWRAAWMA 325

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            + K  ++ E + ++++A  T  W       V  +A++ +GG+GY  E  + R +R++  
Sbjct: 326 RQGKPFTQAEGSMSKLVAGETAVW-------VTEQAIQILGGAGYTREHPVERWHRDAKI 378

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 379 FTIFEGT 385


>gi|325003231|ref|ZP_08124343.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 44/259 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----------V 249
            G+TE   GTD + I +   +  DG Y +SG K ++S       I+LA           +
Sbjct: 124 FGVTEPDAGTDTSRIRTVAVRDGDG-YRISGRKVWISKAAESDRILLATRTAERDPAAPM 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
           EG +  FLV     D    G+   R   K+G  + A+ E+   +     G L+G  N   
Sbjct: 183 EG-LSIFLV-----DMDDPGIA-TRAIPKMGRNAVASYEVTLDDVRVPAGRLVGAEN--- 232

Query: 307 GPVEDMKIL--------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              E  ++L        I L    + +   R S+  A+ YA  R V G  +     +   
Sbjct: 233 ---EGFRVLLDGLNPERILLAHEALGIG--RASVDAAVRYAGEREVFGRPIGQNQGIAFP 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+    + AA  +  + A  +D  +  + EA  A+ +A    Y           +A++ 
Sbjct: 288 LAEANARLDAAELVCRQAAWLYDRGERCAREANTAKFLAADAGYRAAD-------QALQT 340

Query: 419 IGGSGYIEERSIARHYRES 437
            GG GY +E  + R++RE+
Sbjct: 341 FGGMGYADEYHVNRYFREA 359


>gi|311742080|ref|ZP_07715890.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314573|gb|EFQ84480.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 380

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 38/268 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
           + +TE   G+D+  I +    + DG  Y ++G K F+++ + +D  +++ Q +   G   
Sbjct: 124 IAMTEPGTGSDLQGIKTSA--VLDGDEYVINGSKTFITNGINADLVLVVCQTDPSAGAMG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
              +  +    G    R  +KIG ++  T EL F N               F +L+  L 
Sbjct: 182 FSLIAVERGAEGFERGRNLDKIGLKAQDTAELFFDNVRVPKENLIGEPGQGFIYLMEKL- 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
               P E + I      ++++ +  R  +   + Y + R   G     +P+     +   
Sbjct: 241 ----PQERLSI------SVVAAAACRRVIDMTVDYVKERKAFG-----KPIGSFQNSRFT 285

Query: 364 LDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           L   A      R+A  F DE+ ++          A + K+W  ++    + + ++  GG 
Sbjct: 286 L---ATLETEARIAQVFVDESITQLNAKQLTVDDAAMGKWWTTELQKKTVDQCLQLHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  I++ Y ++   +I  G+   M
Sbjct: 343 GYMSEYPISKAYLDTRIQTIYGGTTEIM 370


>gi|86160534|ref|YP_467319.1| acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777045|gb|ABC83882.1| Acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 580

 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 34/266 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGR--VGCF 256
           LTE   G+D A+I +   +  DG + L+G K W  +  ++D F + A+  +EGR  +  F
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDG-WILNGEKLWITNGGIADFFTVFAKTSLEGRGHITAF 210

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           +V R ++     G+     ++K+G R+++T       V +  +N  G       V+    
Sbjct: 211 IVTRDMK-----GVSTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVA---- 261

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MKIL          SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  
Sbjct: 262 --MKILNAGRTGLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCY 319

Query: 368 AATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA ++   +A   D     ++ EAA ++++A  + +           EA++   GSGY+ 
Sbjct: 320 AAESVVNMVAGLVDRGFEETQVEAAISKVLASESVWRTAD-------EALQIAAGSGYMR 372

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E       R++  N I  G+   + L
Sbjct: 373 EMPYEMALRDTRINRIFEGTNEILRL 398


>gi|119961544|ref|YP_947297.1| Acyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119948403|gb|ABM07314.1| putative Acyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 39/260 (15%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------------ 246
           G GLTE+  G+D A  T     + +G + ++G+K F+++  +D   ++            
Sbjct: 123 GFGLTEREAGSD-AGGTKTNAHVENGEWVINGNKEFITNSGTDITTLVTVTAVTGKKENA 181

Query: 247 -AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
               +  +   LVP      +P G   ++  NK+G  ++ T  L   N       LLG+ 
Sbjct: 182 DGSTKKEISTILVPT----DTP-GFTAEKPYNKVGWNASDTHPLTLDNVRVPEANLLGER 236

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
                       L  LD   ++++ +    A+     ++ YA+ R   G     Q + K 
Sbjct: 237 GRGYA-----NFLSILDEGRIAIAALATGAAQGCVDLSVKYAKERSAFG-----QNIGKY 286

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                 +    A A + RLA  + +A SR       +  A I K    + A     +A +
Sbjct: 287 QAIQFKIARMQARAHTARLA--YYDAASRMLAGKPFKTEAAIAKMVAGEAAMDNARDATQ 344

Query: 418 CIGGSGYIEERSIARHYRES 437
             GG G+I E ++ARHYR+S
Sbjct: 345 VFGGYGFINEFTVARHYRDS 364


>gi|111023361|ref|YP_706333.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822891|gb|ABG98175.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 401

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML----AQVEGR-- 252
           + +TE   G+D AA+T+    + DG  Y L+G K F+++      I++     + +GR  
Sbjct: 131 MAITEPGFGSDSAAVTTTA--VLDGDEYVLNGEKIFVTAGERSTHIVVWATVDKTKGRAA 188

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTG 307
           +  F+VPR        GL   RL++K+G +++ T  L   +       LLG  ++NV  G
Sbjct: 189 IKSFVVPR-----DAPGLSVARLEHKLGIKASDTAVLLLQDCRIPKDNLLGTPEVNVEKG 243

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI--DQPVMKRAIA---- 360
               M+     D+    V+GM V L  A     R  +S  G+ I  D P   +  A    
Sbjct: 244 FAGVMQTF---DNTRPIVAGMAVGLGRAALEELRSILSDAGVEISYDTPAYNQHAAAAEF 300

Query: 361 -DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  AA  L+ R     D  K  S EA+ ++  A        +   A+  +A+E  
Sbjct: 301 LQLEADWEAAYLLALRATWMADNKKPNSLEASMSKAKA-------GRTGTAISLKAVELA 353

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G  GY E   + +  R+S    I  G+
Sbjct: 354 GTLGYSERPLLEKWARDSKILDIFEGT 380


>gi|319763957|ref|YP_004127894.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330823779|ref|YP_004387082.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118518|gb|ADV01007.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309151|gb|AEB83566.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 23/244 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGC 255
           ++E  GG D A           G Y L+G K W   +  +D  I+ A+       G +  
Sbjct: 133 ISEASGGADPARSIRARAVRKGGKYILNGSKMWITGAKGADWGIVFARTGEQGDRGGITS 192

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F+V     +G+P G+    LK     RS +  E+ F +        LG+        E  
Sbjct: 193 FIV-----NGNPEGMS---LKPIPVIRSYSPYEITFKDVEVPVEDRLGEEGQGFAICEKW 244

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            I   +  A  ++   + +L  AI +A+ R      L D+  ++  IAD  +++ AA  L
Sbjct: 245 LIEGRIPYAAGTIGVAQAALQIAIDWAKERETFRTKLADKQAIQWMIADSEMELRAARLL 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +++ A   D  +         ++ + I K    + A  V+  A++ +GG G  +E  + R
Sbjct: 305 TWQAAWIADLGRGD------LKVASSIAKVTATETANRVVDRAIQILGGLGVSQELPLER 358

Query: 433 HYRE 436
            +RE
Sbjct: 359 WFRE 362


>gi|109098065|ref|XP_001096530.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 1 [Macaca mulatta]
 gi|297263154|ref|XP_002798752.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           [Macaca mulatta]
          Length = 498

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A++ S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 57  LTEPASGSDAASVQSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 116

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 117 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGGG 169

Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
               M IL      + SA   V+GM   L E    YA  R      L +  +++   A +
Sbjct: 170 FKVAMNILNSGRFSMGSA---VAGMLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALM 226

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D+      S EAA  ++ +    + C       ++EA++ +G
Sbjct: 227 AQKAYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILG 279

Query: 421 GSGYIEERSIARHYRES 437
           G GY ++    R  R++
Sbjct: 280 GLGYTKDYPYERILRDT 296


>gi|315445503|ref|YP_004078382.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263806|gb|ADU00548.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 393

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 17/257 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           +G+TE   G+D++ I +      D  + ++G K F+++   +D  I   +        L 
Sbjct: 126 IGMTEPGAGSDLSGIRTSAVDKGDH-FLVNGAKTFITNGQNADLVITAVRTSPDRHRGLT 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++E G  +G    R  +K+G     T EL F++       +LG+  V  G    M+ L
Sbjct: 185 LLVMERGL-DGFERGRNLDKLGLHCQDTSELTFTDVKVPKENVLGE--VGDGFAHMMRNL 241

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A+ S+  +R +L   + Y R R   G  +      + ++AD+A  +A   A  
Sbjct: 242 AQERMQIAVGSLGRIRAALDWTVTYVRERTAFGKPIGALQNTRFSLADVATQLAVTQAFI 301

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  +E +  + +AA A++ A  T++ C       +    +  GG GY+ E  IAR 
Sbjct: 302 DNCVIELNEGRLTAADAAMAKLWASETEFRC-------LDACQQLFGGYGYMREYPIARA 354

Query: 434 YRESPANSILLGSGNAM 450
             ++    +  G+   M
Sbjct: 355 AIDARITRVYGGTSEIM 371


>gi|311264384|ref|XP_003130140.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like,
           partial [Sus scrofa]
          Length = 251

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 38/260 (14%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCFLVPRLL 262
           G+D A++ +  ++  D  Y L+G K F+S    +D ++++ +  G     + C +V    
Sbjct: 2   GSDAASLLTSAERQGDH-YILNGSKAFISGGGEADIYVVMCRTGGPGHKGISCVVV---- 56

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVE 310
           E G+P GL + + + K+G  S  T  + F +              GFL+    ++ G + 
Sbjct: 57  EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGDEGQGFLIALRGLNGGRI- 114

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                   + A  S+     S+     + + R   G  L +   ++  +AD+A  + A+ 
Sbjct: 115 --------NVASCSLGAAHASIILTRDHLKVRKQFGEPLANNQYLQFKLADMATKLVASR 166

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  R A     A +  EE   A  +  + K +       +  +A++  GG GY+++ ++
Sbjct: 167 -LMIRSA-----AVALQEEREDAVALCSMAKLFATDECFEICNQALQMHGGYGYLKDYAV 220

Query: 431 ARHYRESPANSILLGSGNAM 450
            ++ R+S  + IL GS   M
Sbjct: 221 QQYVRDSRVHQILEGSNEVM 240


>gi|308176382|ref|YP_003915788.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307743845|emb|CBT74817.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 392

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 21/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P      AIG  GLTE   G+D +++T+  ++  D        +W   + ++   ++ AQ
Sbjct: 126 PKMAAGEAIGCFGLTEPTAGSDPSSMTTFARRDGDDWVINGSKRWIGLANVAQVAVIWAQ 185

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            E  +  F+VP      +  G     ++ K+  R++   E+E  +       +L ++   
Sbjct: 186 TEEGIRGFVVPT-----NTPGFTATPIEQKLSMRASIQCEIEMVDMRLPGSAVLPNVVGL 240

Query: 306 TGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            GP   +    Y    I+  S+   R +  +A+ Y++ R      L    + ++ + D+A
Sbjct: 241 KGPFSCLNEARY---GILWGSMGAARDAFEDALAYSQERLQFDKPLAGYQMTQQKLVDMA 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+I     L+  +    D  K           M  + K   C+ A A+  EA   +GG+G
Sbjct: 298 LEINKGFLLALHIGRLKDAGKLDLH-------MISVGKLNNCREAIAICREARTILGGNG 350

Query: 424 YIEERSIARH 433
              + S  RH
Sbjct: 351 ITLDYSPLRH 360


>gi|257389147|ref|YP_003178920.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257171454|gb|ACV49213.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 380

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 118/272 (43%), Gaps = 25/272 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +     G  LTE   G+D + +++   +  D  + L G K F++ + ++ + ++ A 
Sbjct: 113 PLAEGEYLGGWALTEPESGSDASDMSTTATREGD-EWVLDGTKQFITNASVAGSLVVKAV 171

Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
            E   G   +   L D  + +G        K+G  ++ T E+ F +       +LG+   
Sbjct: 172 TEPDAGYDGISTFLVDPEADDGFEVTTEWEKMGLNASPTCEIRFDDCRIPADRMLGE--P 229

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
             G  +  K L   D   +S++ + V LA+     A+ YA+ R   G  + +   ++  +
Sbjct: 230 GDGWEQTKKTL---DGGRISIAALSVGLAQGAFEAALEYAKEREQFGQPIGEFDAVRDML 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            ++   I  A  L+ + A  +D      E+      MA +     C+    V  +A++ +
Sbjct: 287 VEMDRKIERARLLTHKAATKYDAG----EDVGRLSSMAKLDASEICR---EVAEDAVQVL 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG GY  + +  R YR+  A  + +G G + +
Sbjct: 340 GGYGYTTDFAPQRFYRD--AKLMEIGEGTSEI 369


>gi|14530946|gb|AAK63186.1| probable acyl-CoA dehydrogenase [Glomus intraradices]
          Length = 520

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 31/272 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGH-KWFLSSPMSDAFIMLAQVEGRVGC 255
           I L +TE   G+D+A + ++ +   DG  Y ++G  KW  +   SD F +  +  G    
Sbjct: 244 ICLAITEPYAGSDVANLKTEAKLSDDGQYYIVNGEKKWITNGIFSDYFTVAVRTGGPGMG 303

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVE 310
            +   L+E   P     Q L + +       +  E      SN  G   G          
Sbjct: 304 GVSLLLIEKDMPGVKTRQMLCSGVWASGTTYITFEDVKVPRSNLIGKENGGFKCIMHNFN 363

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ +    AI +    RV   EA+ YA +R   G  L++  V++  +A +A  I A  
Sbjct: 364 HERMSL----AIQANRFARVCYEEAMKYAHKRKTFGKKLVEHDVIRNKLAHMARKIEATH 419

Query: 371 ALSFRLANSFDEAKSRSEEA--------AYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A    L   +   K  + EA        A  +  +  T  +C +       EA +  GG 
Sbjct: 420 AWMESLI--YQTTKLPANEAMTLLGGPIALLKAQSTQTFEYCAR-------EATQIFGGL 470

Query: 423 GYI---EERSIARHYRESPANSILLGSGNAMV 451
            Y    +   + R YRE P  +I  GS   M+
Sbjct: 471 AYSRGGQAEKVERLYREVPPYAIPGGSEEIML 502


>gi|154244859|ref|YP_001415817.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158944|gb|ABS66160.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 45/291 (15%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A+  TP     + P + S E             +     LTE   G+D  ++ +  ++ 
Sbjct: 97  IAIDGTPEQKAKYLPGLASGE-------------IVGSFALTEPDVGSDAGSVKTTARRD 143

Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQR 274
            D +Y L+G K F++ +P +  F ++A+ +        V  F V R    G+P GL   +
Sbjct: 144 GD-VYVLNGTKRFITNAPHAGLFTVMARTDPSQKGASGVSAFAVER----GTP-GLFTGK 197

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            + K+G +     ++ F +       L+G +    G    MK+L   D   + ++   V 
Sbjct: 198 PEKKMGQQGAHVCDVIFDDCRVPASALIGGVE-GQGFKTAMKVL---DKGRLHIAAACVG 253

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           L+E I      YA  R   G  L D  +++   AD   D  AA  +    A   D  +  
Sbjct: 254 LSERILDDMLAYAVGRRQFGRPLADFQLLQAMFADSKADAYAARCMVLDAARRRDAGQDV 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           S EA+ A       K +  +    +    ++  GG+GYI E    + YR++
Sbjct: 314 SVEASCA-------KMFASEAVGRIADRNVQVHGGNGYIREYRAEQLYRDA 357


>gi|295396987|ref|ZP_06807105.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
 gi|294974768|gb|EFG50477.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
          Length = 400

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 37/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI-MLAQ--VEGRVGC 255
             LTE   G+DIA   +    + DG  + L+G K ++    S  FI   A+      + C
Sbjct: 142 FALTEPDHGSDIAGGMAT-TAVRDGDNWLLNGEKRWIGGAGSADFIPTFARNPENNDILC 200

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+V    E     GL  +++  KI  R      +   N      F L  +        D+
Sbjct: 201 FMVSTATE-----GLTVEKIDGKIALRLVQNGHIHLKNVQVAEAFRLPKIQ----SFRDV 251

Query: 313 KILIYL---DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             ++Y    D + ++  G   +L  A+ Y  +R   G  +    + +  +A +  + A  
Sbjct: 252 SRILYATRADVSHITAGGHAGALRAALKYTGQREQFGKKVSQFQITQEKLARMQANAATG 311

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +LS+RLA    E K       YA + A I K    ++    +A   E  GG+G   +  
Sbjct: 312 LSLSYRLAELQTEGK-------YAEVPASIAKMQNARLLRETVALGREICGGNGITVDTE 364

Query: 430 IARHYRESPA----------NSILLG 445
           +AR++ ++ A          NS+++G
Sbjct: 365 VARYFGDAEAIYSYEGTHEVNSLIIG 390


>gi|254466093|ref|ZP_05079504.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687001|gb|EDZ47483.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI--MLAQVEG----- 251
           L +TE   G+D+  + +  +K  D  + L+G K F+S + ++D  I  M   VE      
Sbjct: 123 LAMTEPDAGSDLRGMKATARKDGDD-WILNGTKHFISHADIADFAICFMATGVEDTPRGP 181

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG+++   
Sbjct: 182 KKKITAFFVDK----GTP-GFEVRDGYGNVSHRGYTNSVLEFDDCRLPSSAILGEVDKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  +I YA  R   G  +     +   +AD+AL++
Sbjct: 237 EVANTWLGATRLQVAATCLGRAERALQHSIEYAAERKQFGQQIGKFQGISFKLADMALEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+      + + A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAANLLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAFVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|111224271|ref|YP_715065.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111151803|emb|CAJ63523.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 404

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFL-VPRLLEDG 265
           G+D AA+++   ++ DG + + GHKWF +     A+ I  A+  G VG        L D 
Sbjct: 141 GSDPAALSTTAVRVDDG-WRIDGHKWFSTGADGAAYAICFARTSGTVGTVGGATMFLVDA 199

Query: 266 SPNGLCYQRLKNKIGNRS-NATVELEFSNTF---GFLLGDLN-------VSTGPVEDMKI 314
              GL   R  + +         E+ F N       +LG+L+       V  GP      
Sbjct: 200 DNPGLKVVRHIDTLDQAMIGGHCEVIFDNCVVPDSAILGELDQGFAYAQVRLGPARMTHC 259

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           + +L  A       R +   AI     R + G  L +  + ++ IAD  +DIAA+ +L  
Sbjct: 260 MRWLGIA-------RRAQDIAIDRIAERRLFGSKLTELGMAQQMIADSEIDIAASRSLIL 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +     D+ +  ++  A       +TK +  +    V+  A++  G +G   E  + R+ 
Sbjct: 313 QACWELDQGQRAAQSTA-------MTKTFVAEAVWRVVDRAIQLCGAAGVSGELLLGRYL 365

Query: 435 RESPANSILLGS 446
            E  A  I  G+
Sbjct: 366 NEVRAFRIYDGA 377


>gi|239981829|ref|ZP_04704353.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 368

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        L+E   G+D A + ++  +  D  + L+G K W  ++ +S+ + ++A 
Sbjct: 102 PLAKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 160

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305
            +       +   + +    G+ +   + K+G + + T E+ F N    +  D  +    
Sbjct: 161 TDPEKRSKGISAFVVEKGDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 218

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           TG    MK    LD   ++++   + +A+     A  Y + R   G  + D   ++  +A
Sbjct: 219 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLA 275

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + AA  L++  A     AKS   E           K +    A  +  +A++ +G
Sbjct: 276 DMAMKLEAARQLTYAAA-----AKSERVENDLT-FFGAAAKCYASDAAMEITTDAVQLLG 329

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  +  + R  R++    I  G+
Sbjct: 330 GYGYTRDYPVERMMRDAKITQIYEGT 355


>gi|271967044|ref|YP_003341240.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270510219|gb|ACZ88497.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 19/260 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P      A+G  GLTE   G+D  ++ ++ ++  DG  + L G K W  
Sbjct: 110 FGSEEQKLEWLPRMAAGEALGCFGLTEPDSGSDPGSMRTRARR--DGTDWVLDGTKMWIT 167

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++D  ++ AQ E  +  FLVPR    G+P GL    +  K+  R++ T EL      
Sbjct: 168 NGAVADVAVVWAQTEEGIRGFLVPR----GTP-GLSAGVVHGKLSLRASITSELVLDGVR 222

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L ++ G    +  L      I+  +    R     A+ YA+ R   G  +    
Sbjct: 223 LPHEAALPLAEGIKAPLTCLSEARFGIVWGAAGAARDCFEAALDYAQTRTQFGRPIAAFQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  IAD+ +D+  A+  + R+    DE ++     ++ ++          + A  V A
Sbjct: 283 LTQGKIADMLVDVNQASLTALRIGRLKDEGRAHPSHVSFGKLAN-------VRAAQRVAA 335

Query: 414 EAMECIGGSGYIEERSIARH 433
            A    G SG   E  + RH
Sbjct: 336 TARSVHGASGITLEYPVMRH 355


>gi|221213070|ref|ZP_03586046.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221167283|gb|EED99753.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 384

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 51/313 (16%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +V +   VA   +  + ++  PKI S       KA +        L ++E   G+D
Sbjct: 92  ITTTAVYAGMHVAKFGSDALKQEIIPKIIS------GKAKLS-------LAMSEPGTGSD 138

Query: 211 IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLE 263
           +A I +   +  D  Y L+G K W   + ++D  +++A+ +        PR      +L 
Sbjct: 139 VAGIRTTAIRDGDE-YVLNGSKVWITCAHVADYIVVIAKTDRDA-----PRHQGISTILV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           D    G+  + L N +G R+    E+ F N       L G    +   +  MK L     
Sbjct: 193 DAKAPGVTIRPL-NMLGRRTTHANEVFFDNVRVPASNLFGGEGQAWKNI--MKCLGLERM 249

Query: 321 AIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALS 373
           A+ ++S G    + E A  YA++R     I  DQP     V++  + ++A+    +    
Sbjct: 250 ALAAISAGHCFRITEYASDYAKQR-----IQFDQPISSFQVIQHKLVNMAIMAETSRQSV 304

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R+A   D       E + A+I+     + C         E ++ +GG+GY  E  +   
Sbjct: 305 YRVAELLDGGNPAINETSIAKIVCTENNFRCAD-------EGLQILGGAGYSMEYDMQMF 357

Query: 434 YRESPANSILLGS 446
           +R+S    I  GS
Sbjct: 358 FRDSRVGPIGGGS 370


>gi|304393206|ref|ZP_07375134.1| short-chain specific acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303294213|gb|EFL88585.1| short-chain specific acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 393

 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 24/262 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS----SPMSDAFIMLAQVE---- 250
           L +TE   G+D+  + +  ++  DG  + L+G K F+S    +  +  F+   +VE    
Sbjct: 123 LAMTEPGAGSDLRGMKATAKQ--DGTDWILNGTKHFISHADIAGFAICFMKSGEVETPRG 180

Query: 251 --GRVGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
               +  F V +  E G    G   +   N + +R      LEF +       +LG++  
Sbjct: 181 TKAEITAFFVDKFAEGGGTTPGFTVRDGYNNVSHRGYTNAVLEFDDCRVPAENVLGEVGK 240

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                 D      L  A   +     +   A+ +A  R   G  +     +   +AD+A+
Sbjct: 241 GFEVANDWLGATRLQVAATCLGRADRAFQHALSFATERKQFGQQIGKFQGISFKLADMAM 300

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L++   + FD       + A A++ A        ++   +  EA++  GG G 
Sbjct: 301 ELKAAELLTWEAGSKFDTGGCTDMDMAMAKLKAS-------EVLAMIADEALQIHGGMGL 353

Query: 425 IEERSIARHYRESPANSILLGS 446
           ++E  + R +R++    I  G+
Sbjct: 354 MDELPLERIWRDARIERIWEGT 375


>gi|146306754|ref|YP_001187219.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574955|gb|ABP84487.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 154/371 (41%), Gaps = 37/371 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ--AHKIRAARLY---LM 143
           P  +R   V   P   +LLR          IW RS E         H +  A L    L 
Sbjct: 25  PLAKREGIVWGEPVAKSLLR---------DIWSRSCELGFYNAMLPHALGGAGLGVADLC 75

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A  EA  L    +    +  L   PRV   +  K+ ++    T   P+ +   A+   LT
Sbjct: 76  ALKEAAVLTGSPLAPHILGELSGPPRVGHLF--KVANQHQVETFLGPICRAEKAVCFALT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGR----VGCFL 257
           E   G+D  AI ++  ++    Y L+G K ++S +P +D  ++LA    GR    +  F 
Sbjct: 134 EAEAGSDATAIGTE-ARLEGEHYVLNGAKRYISGAPYADLAVLLAVTGPGRGPQGISAFF 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKI--GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           +  L  +G    + Y  +      GN     V +  +N  G       ++ G +   ++L
Sbjct: 193 I-DLHAEGVSIDIDYSVMSGGGAHGNILLRDVRVPVANRIGEEGAGFKLAMGRITLNRLL 251

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                 ++ ++G+ ++L  ++ YAR R   G  +     +   +AD+A ++ AA ++ + 
Sbjct: 252 HC--PTMLGMAGLALNL--SLDYARTRKQFGQPIAMFQSINHMLADMATELYAARSMMYA 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A       + ++     ++ AP+ K +  + A  +   A++  GG+G I+   +   +R
Sbjct: 308 TA-------AHNDAGGDIKVQAPMCKLYASETAFRIADRAVQIHGGAGLIKGHPVEWIFR 360

Query: 436 ESPANSILLGS 446
            S    IL G+
Sbjct: 361 ASRMMRILTGT 371


>gi|296423691|ref|XP_002841387.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637624|emb|CAZ85578.1| unnamed protein product [Tuber melanosporum]
          Length = 518

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 111/274 (40%), Gaps = 36/274 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A +  +  K SDG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 243 ICLCITEPGAGSDVANLNCEANKTSDGRHYIVNGEKKWITNGIWSDYFTVAVRTGGPGMG 302

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +  P G+  + +  + G   + T  + F         D+ V   PVE++    
Sbjct: 303 GVSVLLIERGP-GVSTREMDCQ-GVHGSGTAYITFE--------DVKV---PVENLIGRE 349

Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               K+++       L   I      RV   E++ YA RR   G  LI+ PV++  +A +
Sbjct: 350 NAGFKVIMTNFNHERLGIVIQCTRFSRVLYEESMKYANRRRTFGKKLIEHPVIRMKLAHM 409

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIG 420
           A  I A       L N   +     +  A  ++   I   K            EA +  G
Sbjct: 410 ARQIEATHNW---LENIVYQGSCMGDTEAMLKLGGAIAGLKAQSTTTFEFCAREATQIFG 466

Query: 421 GSGYIE---ERSIARHYRESPANSILLGSGNAMV 451
           G GY +      + R YR+    +I  GS   M+
Sbjct: 467 GIGYTKGGVGAKVERLYRDVRGYAIPGGSEEIML 500


>gi|256420084|ref|YP_003120737.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256034992|gb|ACU58536.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 597

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 162/388 (41%), Gaps = 56/388 (14%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L AGH  S SV  A+   + + P ++  +  +   ++Y P   +   K + A    LTE 
Sbjct: 104 LGAGH--SFSVAMAAHTGIGSLPILY--FGTEAQKQKYIPFLGSGQMKGAYA----LTEP 155

Query: 206 RGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLL 262
             G+D  +  +  +  +DG  Y L+G K W  +S  +D F + A+++G +   F+V    
Sbjct: 156 NSGSDALSAKTTAKLSADGKFYILNGQKCWITNSGFADVFTVFAKIDGEQFTAFIV---- 211

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-- 317
            D    G      ++K+G + ++T ++ F +       +LG+  +  G +    IL    
Sbjct: 212 -DKDTPGFTLGAEEHKMGIKGSSTRQIYFQDAQVPVENVLGE--IGKGHLIAFNILNIGR 268

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L     +V   +   +  + YA  R      + +   +K  + ++ +      +  +R A
Sbjct: 269 LKLCAAAVGAAKNVTSITVQYANTREQFKQPIANFGAIKHKLGEMVIRNWVCESALYRTA 328

Query: 378 NSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIA----------EAMECIGGSGYI 425
              D+ +     A   +A  +    + +  + A   +A          E ++  GG+G+ 
Sbjct: 329 QLIDDKEKELLAAGKPFAEALLGAAEEYAVECAILKVAGSEALDFSVDEGVQIHGGNGFS 388

Query: 426 EERSIARHYRESPANSILLGSGNA---MVLDV---------LNLLEKGTNLFEQLFSTLE 473
           +E  I++ YR+S  N I  G+      + LD+         L+L+    N+ ++L S   
Sbjct: 389 DEYVISKAYRDSRINRIFEGTNEINRLLALDMTLKRALKGRLDLMNPAMNVMKELMSI-- 446

Query: 474 QDLG-------SSGKKVITILRDSISLC 494
            D G       ++ KKV+   + +I L 
Sbjct: 447 PDFGNEDETPFAAEKKVVANFKKAILLV 474


>gi|297530098|ref|YP_003671373.1| acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           C56-T3]
 gi|297253350|gb|ADI26796.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           C56-T3]
          Length = 392

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 37/230 (16%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + L G K F S +P  D  ++ A +E GRVG FLVP      S +G+  +   N +G 
Sbjct: 153 GRWVLRGRKTFASLAPALDYVLISATMEDGRVGEFLVPM-----SASGIRIEPTWNTLGM 207

Query: 282 RSNATVELEFSNT------FGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSL 332
           R+  + +L               LG+ N    P +   + +   YL  AI + +      
Sbjct: 208 RATRSDDLVLEEVEVDQKALVETLGEAN-EAAPAQGWLLHVPACYLGIAIAARN------ 260

Query: 333 AEAIHYAR--RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---- 386
            EA+ +A+  + +     +   P ++R IA++   +  A    + +A+ +D    +    
Sbjct: 261 -EALRFAKTYQPNTLPHPIASTPEVQRKIAEMEWRLTHARHFLYAVADLWDRYPEKRMEM 319

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EE A A+++A  T       A  V+  AM  +GG     +  + RHYR+
Sbjct: 320 KEELATAKLVATNT-------ALEVVDWAMRIVGGQSLFADNPLQRHYRD 362


>gi|292491186|ref|YP_003526625.1| acyl-CoA dehydrogenase domain protein [Nitrosococcus halophilus
           Nc4]
 gi|291579781|gb|ADE14238.1| acyl-CoA dehydrogenase domain protein [Nitrosococcus halophilus
           Nc4]
          Length = 639

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 25/294 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE------GRV 253
           L+E   G+D     ++ +   DG  Y L+G K W  S+ +S  F +LA+ +      G+ 
Sbjct: 177 LSEPNVGSDAGGQETRCELSEDGRFYILNGEKKWASSAALSGLFTVLAKQKIQDPQSGKE 236

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +   +          Y R ++K G R      + F +     +   N+     + +K
Sbjct: 237 KDHVTALICTPDMEGIDIYSRNRSKCGIRGTWQARIRFRDV---KVPKENLLHQEGKGLK 293

Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + L  LD    +++   V  A     +A+ +A+ R+  G  L +   ++  IA +A    
Sbjct: 294 VALTCLDYGRCTLAAGMVGSATMAYEQAVKWAQYRYQFGCPLAEFEQIQAKIAAMAAYCY 353

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+ +      D    R +E     +   I K +C +M   VI EA++ +GG  Y+ E
Sbjct: 354 AMEAMLYMTTGMLD----RHDEDIM--LETGICKVFCSEMGYRVIDEALQIMGGESYMTE 407

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
             I R +R+S  N I+ G+   M+  +     K   L E L    E  L   G+
Sbjct: 408 NEIERLWRDSRINLIVEGANEVMLSFIFGYGSK--QLGESLLKIAENPLKHLGQ 459


>gi|138895294|ref|YP_001125747.1| Short-chain-specific acyl-CoA dehydrogenase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266807|gb|ABO67002.1| Short-chain-specific acyl-CoA dehydrogenase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 397

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 40/235 (17%)

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           + +G + L G K F S +P  D  ++ A +E  G VG FL P      S  G+  +   N
Sbjct: 150 LRNGRFVLCGRKSFASLAPALDYVLISATIEDSGEVGEFLTPM-----SATGMRIEPTWN 204

Query: 278 KIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSG 327
            +G R+  +       VE+E  +    +LG  N  T P +   + +   YL  AI + + 
Sbjct: 205 TLGMRATRSDDLILDGVEVE-KDALVEILGKSN-ETAPAQGWLLHVPACYLGIAIAARN- 261

Query: 328 MRVSLAEAIHYAR--RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 EAI +A+  + +     +   P ++R IA++   +A A    + +A+ +D    
Sbjct: 262 ------EAIRFAQTYQPNTLSHPIASTPEVQRKIAEMEWRLAHARHFLYAIADLWDRYPD 315

Query: 386 R----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +     EE A A+++A  T       A  V+  AM  +GG     +  + R+YR+
Sbjct: 316 KRAEMKEELAAAKLVATNT-------ALEVVDMAMRIVGGQSLFADNPLGRYYRD 363


>gi|145593492|ref|YP_001157789.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302829|gb|ABP53411.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 17/267 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA+T++  +  D  + L+G K W  ++ +S+ + + A  +       +  
Sbjct: 131 LSEPEAGSDAAAMTTRAVRDGDH-WVLNGVKRWITNAGVSEFYTVFAVTDPTARSRGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + + S  G+ +   + K+G + + T E+        +  D  +          +  LD 
Sbjct: 190 FVVEKSDPGVSFGAPEKKLGIKGSPTCEVYLDGV--RIPADRMIGAEGTGFATAMQTLDH 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++++   V +A+     A  Y + R   G  + D   ++  +AD+ + + AA  L++ 
Sbjct: 248 TRITIAAQAVGIAQGALDYAKGYVQERRQFGKPVADFQGIQFMLADMGMKLEAARQLTY- 306

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  A +RSE   A         K +    A  +   A++ +GG GY  +  + R  
Sbjct: 307 ------AAAARSERGDADLTYFGAAAKCFASDAAMEITTNAVQLLGGYGYTRDYPVERMM 360

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R++    I  G+     + +   L KG
Sbjct: 361 RDAKITQIYEGTNQVQRIVIARQLLKG 387


>gi|260550909|ref|ZP_05825115.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260406036|gb|EEW99522.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 325

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 40/252 (15%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + W PK+ + E             V   +G+TE   G+D+ ++
Sbjct: 91  SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +    + D  Y L+G K F+S+   +D  ++  + + +     V  LL D    G    
Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 196

Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319
              +KIG  S  T EL F N               F +L+ +L     P E   I     
Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R    
Sbjct: 247 -ASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305

Query: 380 FDEAKSRSEEAA 391
           + E K   E AA
Sbjct: 306 YQEGKLDVETAA 317


>gi|282866796|ref|ZP_06275833.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282558342|gb|EFB63907.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 397

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 22/183 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GR--VGCF 256
           LTE  GG+D+A   +   + SDG + L+G K  ++ +P++D  ++L +V   GR  +  F
Sbjct: 140 LTEPHGGSDVARTRTLATRTSDG-WSLTGKKDHITNAPVADRALVLGRVPDLGRRDITLF 198

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           LV  L   G   G   + L    G RS+ T  +E        L +  V   P E ++ L 
Sbjct: 199 LV-NLHSPGVRRGPAEELL----GLRSSPTGAIELRE---VALPEPAVLGAPGEGLRTLY 250

Query: 316 --IYLDSAIMSV---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD--IALDIAA 368
             I  D A+  +   + +   L +A+ +ARRR   G  ++D   ++  + D  I ++IA 
Sbjct: 251 DIISFDRALYGLVIAAFLEPQLDKAVGFARRREAFGTPILDHQYVQGRVTDIRITIEIAR 310

Query: 369 ATA 371
           ATA
Sbjct: 311 ATA 313


>gi|256395452|ref|YP_003117016.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256361678|gb|ACU75175.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 383

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 11/270 (4%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           +   + A  L L+E   G+D+AA+  +     DG + L+G K W     ++D  ++LA+ 
Sbjct: 123 LATGTTAGALALSEPGAGSDLAAVALEAVADGDG-FVLNGTKTWIAQGDIADVCVVLART 181

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-FLLGDLNVSTGP 308
               G   +   L + S  G   + +   I  RS A ++       G  +LG+       
Sbjct: 182 GDGPGPLGLTAFLVESSVPGFKAEPI-GAIAPRSWAQLDFTDVRVGGEAVLGERGQGFVV 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             D+        A  ++   R +   A+ +AR R V GG L D  ++K ++A + + ++A
Sbjct: 241 ALDILERARATVAAAAIGFARRAFRLALEHARTRKVYGGRLADLQLVKSSLARMDVKLSA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A+ L+ R A + D     ++ ++       I K    + A  ++  A++  G +G +   
Sbjct: 301 ASLLTARAAWAIDGDLDHAKHSS-------IAKLHSTEAAGEIVDGAVQIFGAAGLVAGS 353

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ R YR+  +  I  G+   + + + + L
Sbjct: 354 TVERLYRQIRSLRIYEGASEVIEMTIADAL 383


>gi|222102894|ref|YP_002539933.1| Acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221739495|gb|ACM40228.1| Acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 416

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 22/182 (12%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL-- 315
           ++  G+  G+    L + +G+R+  +  + F N       +LG+      P + +KI+  
Sbjct: 204 IMVPGNTPGVRVAGLLDTVGHRATISPRMTFENVRVPVNNILGE------PGDGIKIVST 257

Query: 316 -IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAAT 370
                +A++    V  MR +   A+ YAR    SG   +I+ P +   +AD+ + I A  
Sbjct: 258 NFAWTAALIGAACVGVMRAAYDYALQYARADSHSGPHPIIEYPTVGYMLADMKMKIEACR 317

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++++  + +D++K    E      +A +TK +C +    V+ +AM  +G   Y +   +
Sbjct: 318 YMTWKACHQYDQSKGAEHE------LAVMTKVFCSETCVDVVYDAMRVVGVDSYTDMHPL 371

Query: 431 AR 432
           A 
Sbjct: 372 AE 373


>gi|296170430|ref|ZP_06852018.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894901|gb|EFG74622.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 52/264 (19%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------E 250
           G GLTE   G+D  A T    ++ +G + ++G K F+++  +D   ++           +
Sbjct: 127 GFGLTEPGAGSDAGA-TRTTARLDNGEWVINGSKQFITNSGTDITKLVTVTAVTGTVGDK 185

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +   +VP    +G+P G   + + +K+G  ++ T  L F++       LLG     TG
Sbjct: 186 KEISTIIVP----NGTP-GFTVEPVYSKVGWNASDTHPLSFADARVPEEHLLGPRG--TG 238

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               + IL    +  A ++    +  + E++ YA+ R   G     QP            
Sbjct: 239 YANFLSILDEGRIAIAALATGAAQGCVDESVKYAKERQSFG-----QP------------ 281

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAY----ARIMA--------PITKYWCCKMAPAVIA 413
           I +  A+SF++A    EA++     AY    A+++A         I K    + A     
Sbjct: 282 IGSYQAISFKIARM--EARAHVARTAYYDAAAKMLADKPFKKEAAIAKMIASEAAMDNAR 339

Query: 414 EAMECIGGSGYIEERSIARHYRES 437
           +A +  GG G++ E  +ARHYR+S
Sbjct: 340 DATQIHGGYGFMNEYPVARHYRDS 363


>gi|315056361|ref|XP_003177555.1| acyl-CoA dehydrogenase family member 9 [Arthroderma gypseum CBS
           118893]
 gi|311339401|gb|EFQ98603.1| acyl-CoA dehydrogenase family member 9 [Arthroderma gypseum CBS
           118893]
          Length = 432

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 39/281 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +K+ D  Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 155 LGVTEPDAGSDVSGIKTVAKKVGD-RYIVNGAKKWITNGIWADYCTAAVRTGGPGHGGIS 213

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +R+ N  G  ++ +  LEF++               F +++ + N  
Sbjct: 214 FLIIPLTAEGVTRRRMFNS-GVHASGSTFLEFADVEVPLENLIGKENEGFKYIMSNFNPE 272

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + L SA + +S  RV + +A  Y+  R   G  L+   V++  I+ +   
Sbjct: 273 R---------LTLASACIRLS--RVCVEDAFKYSTTRETFGKPLLANQVIRAKISKMGQL 321

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I    A   +LA +   ++    +     + A + K    +    V  EA + +GG+GY 
Sbjct: 322 IEPCQAFMDQLAYTIKTSEKTGRKVDIGGMTA-LLKVMSTRCLEKVCREAQQIMGGAGYN 380

Query: 426 EE------RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +        +I+R  R       ++G G+  +L  L++ E+
Sbjct: 381 KAGKGSRIEAISRDVR-----VYVVGGGSEEILQDLSVREE 416


>gi|237803570|ref|ZP_04591155.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025552|gb|EGI05608.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 383

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G++   + ++ +   D  + ++G K F+S+   ++  I+ A  +  +G      
Sbjct: 126 LTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAELAIVFAVTDPELGKKGLSA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP +    +P G    R ++K+G R++ T  +  S+       LLG+    L ++   
Sbjct: 185 FLVPTI----NP-GFVVDRSEHKMGIRASDTCAVTLSDCRIPAANLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +AD+   I A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLADMHTRINA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+   A      +    EA+ A++ A     W C       ++A++  GG GY+E+ 
Sbjct: 296 ARLLTLHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SKAIQIHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  GS
Sbjct: 349 PVERYYRDARITQIYEGS 366


>gi|149917482|ref|ZP_01905980.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149821819|gb|EDM81215.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 407

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 20/268 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR 252
           TS  +G   +E+  G+++  + +  ++  D  + L G K+F  ++ ++D ++++A+   R
Sbjct: 123 TSATLG---SERLAGSELLRMATAARREGDE-WVLDGEKYFSTNAGIADHWLVIARDVAR 178

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  F+V   L   +  G+   R    IG RS+AT EL        +  D  +    V 
Sbjct: 179 DELRGFVVEDPL---TRPGVEVLRRWPMIGVRSSATYELRLRGCR--VPADAALEGNGVR 233

Query: 311 DMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++I +     +++   + ++       + YA+ + V G  LID  V    +  + +DI 
Sbjct: 234 LLEIGLNPSRTLIAACALGIARRIRDLCLDYAQDKRVKGEALIDNAVFAAKLGQVQMDID 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAY----ARIMAPIT-KYWCCKMAPAVIAEAMECIGGS 422
               +    A  FD  + RS+ AA       + + +T K  C ++   V +   E  GG 
Sbjct: 294 TMRCVCKAAARDFDALRGRSDAAAVFMAAGSLASTVTAKVVCGQIGWRVASVGSEMFGGL 353

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY E+  I +  R+    S++ G  + +
Sbjct: 354 GYTEDSLIGKLVRDMRYVSVVEGGEDVL 381


>gi|70730428|ref|YP_260169.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68344727|gb|AAY92333.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 383

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE + G++   + ++ + + DG + ++G K F+S+   +   I+ A  +  +G      
Sbjct: 126 LTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAQLAIVFAVTDPELGKKGLSA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308
           FLVP         G    R ++K+G R++ T  +         +N  G     L ++   
Sbjct: 185 FLVPT-----DTPGFIVDRTEHKMGIRASDTCAVTLNQCTIPEANLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIA 363
           +E  +I I    A  ++   R +   A+ YAR R     +  D+P+++       +AD+ 
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARER-----VQFDKPIIEHQSIANLLADMH 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L    A      +    EA+ A++ A        +MA  V + AM+  GG G
Sbjct: 291 TRLNAARLLILHAARLRSAGQPCLSEASQAKLFA-------SEMAEKVCSSAMQIHGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+E+  + R+YR++    I  GS
Sbjct: 344 YLEDYPVERYYRDARITQIYEGS 366


>gi|254233599|ref|ZP_04926925.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis C]
 gi|124603392|gb|EAY61667.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis C]
          Length = 357

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRTTMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       +LG   +  G  + MK L    +  A  ++     +L +++ YA++R  
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRES 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A       
Sbjct: 276 FGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA------- 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A  +   A+   GG GY  E  + R 
Sbjct: 329 SEVAMEIALNAVRIHGGYGYSTEYDVERR 357


>gi|91780314|ref|YP_555521.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692974|gb|ABE36171.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 378

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 34/273 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE + G++   + ++   + DG + L+G K F+++    A  ++  V     G+ G   
Sbjct: 125 LTEPQAGSEAHNLRTRA-VLRDGTWVLNGSKQFVTNGRRAAVAIVFAVTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           F+VP         G    + + K+G R++ T  +   +       LLG         E +
Sbjct: 184 FIVPT-----HTPGFKVGKPEKKLGIRASDTCPVTLEDCAVPESTLLGRRG------EGL 232

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDI 366
           KI L  L+   + ++   + +A A   A R + +  I   +P+ +       +AD+   +
Sbjct: 233 KIALSNLEGGRIGIAAQAIGIARAAFDAARSYAAQRIQFGKPIREHQSVANMLADMITRL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A           EA+ A       K +  ++A  V ++A++  GG GY+E
Sbjct: 293 NAARLLVHHAARLRSAGLPCLSEASQA-------KLYASEVAEEVCSQAIQIHGGYGYLE 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +  + RHYR++    I  G+     + +   L+
Sbjct: 346 DYPVERHYRDARITQIYEGTSEVQRMVIARQLD 378


>gi|78063490|ref|YP_373398.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77971375|gb|ABB12754.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 129/331 (38%), Gaps = 64/331 (19%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTN 187
           +  A L+L A  E G   + S    ++  L   P VH       K W P           
Sbjct: 66  VTEAALFLRAAAECGGQAAASTIHMNIFGLQ--PVVHFGSDAQKKAWLP----------- 112

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
             P  +        +TE   G D   +    +K  DG Y +SG K F+S+  ++D  ++L
Sbjct: 113 --PFTRGEHKACFAVTEPDTGLDTTKLKVVAKKQPDGNYLISGKKVFISTAQVADHMLIL 170

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLK---------NKIGNRSNATVELEFSNTFGF 297
           A+         + ++ +      L Y +L          +K+G  +  T EL        
Sbjct: 171 ARTTP------IEQVKKHSEGLSLFYTKLDRRYVDIREIDKLGRAAVDTNEL-------- 216

Query: 298 LLGDLNVSTGPV--EDMKILIY----LDSAIMSVSGMRVSLAEAI-----HYARRRHVSG 346
            + DL VS   +  E+ K L Y    +++  + V+  +V +  A+      YA+ R V G
Sbjct: 217 FIDDLPVSKDELIGEEGKGLSYIFHGMNAERVFVAAEQVGMGRAVLKIATQYAKDRVVFG 276

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +A    ++ AA  +    A  +D+  S   EA  A+++A       C+
Sbjct: 277 RPIGQNQGVQHPLARNWAELEAANHMMLAAAELYDKGLSCGSEANAAKLLASEACMQACQ 336

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                   A+   GG GY +E  + R  RE+
Sbjct: 337 T-------AILTHGGFGYAKEYHVERFMREA 360


>gi|159124543|gb|EDP49661.1| acyl-CoA dehydrogenase family protein [Aspergillus fumigatus A1163]
          Length = 512

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 245 LAITEAFAGSDVAGLKTTAKKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFSVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR        G+  +++K      + AT  ++F N        + V     E+ K  I 
Sbjct: 305 IPR------GEGVETKQIKTSYST-AAATAFVQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSAI------MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S        M  + +R+ +    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 352 IMSNFNHERFTMVCAVIRMCMTVTEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      + +++AA+      + K    + A  +   A    GG G 
Sbjct: 412 NQAWLESIAYQMCNM-----TYAQQAAHLGGPIGLLKSHATRCAQEIADHATNIFGGRGI 466

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 467 TQSGMGKVIEMFHRTYKFDAILGGT 491


>gi|163761231|ref|ZP_02168307.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281570|gb|EDQ31865.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 31/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
             L+E   G+D+A +     +  DG Y L+G K W  +  ++D + + A+     G    
Sbjct: 128 FALSEPASGSDVANMAMTATRDGDG-YVLNGEKTWISNGGIADVYTVFARTGEAPGAKGL 186

Query: 256 --FLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             F+VP      +P     +RL     + +     A   +  S   G       ++    
Sbjct: 187 SVFIVPA----DTPGLEIAERLDVVAPHPLARLRFADCRIPASAMIGAPGAGFRIA---- 238

Query: 310 EDMKILIYLDSAIMSVS--GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M +L    S + + +    R +L E++     R + G  + D  +++  IA++ALD+ 
Sbjct: 239 --MSVLDVFRSTVAAAALGFARRALDESLARVSERELFGAPMSDLQMVQGHIAEMALDVD 296

Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A+  L +R A   D+   R S EAA A       K +    A  VI +A++  GG G  +
Sbjct: 297 ASALLVYRAAWLKDQGAPRVSREAAMA-------KLYATDHAQDVIDKAVQLHGGDGVRK 349

Query: 427 ERSIARHYRESPANSILLGSGN 448
              +   YRE  A  I  G+ +
Sbjct: 350 GHIVESLYREIRALRIYEGASD 371


>gi|114052082|ref|NP_001039404.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|122142797|sp|Q2KHZ9|GCDH_BOVIN RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|86438384|gb|AAI12823.1| Glutaryl-Coenzyme A dehydrogenase [Bos taurus]
 gi|296485913|gb|DAA28028.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 438

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 35/248 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D + + ++ +   S   Y LSG K W  +SP++D  I+ A+ E      +
Sbjct: 177 FGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWARCEDSC---I 233

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310
              LLE G   GL   R++ K   R+++T       VE+   N    +L  ++   GP  
Sbjct: 234 RGFLLEKGM-RGLSTPRIEGKFSLRASSTGMIIMDDVEVPEEN----VLPGVSGLAGPFG 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALD 365
                  L++A   ++   +  AE  +H AR+    R   G  L    ++++ +AD+  +
Sbjct: 289 ------CLNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQKKLADMLTE 342

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  
Sbjct: 343 ITLGLHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGIS 395

Query: 426 EERSIARH 433
           +E  + RH
Sbjct: 396 DEYHVIRH 403


>gi|13476417|ref|NP_107987.1| isovaleryl-CoA-dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14027178|dbj|BAB54132.1| isovaleryl-CoA-dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G K W  + P +D  ++ A+ +       +
Sbjct: 128 LAMSESGAGSDVVSLKLRAEKRND-RYVLNGTKMWITNGPDADTLVVYAKTDPERKSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + + +  G    +  +K+G R ++T EL F N        L+     VE +   +  
Sbjct: 187 TAFIVEKAMTGFSVAQKLDKLGMRGSSTGELVFENVEVPFDNVLHEEGRGVEVLMSGLDY 246

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  +++   +  M   L  AI Y   R   G  + +  +++  +AD+   + AA A  + 
Sbjct: 247 ERTVLAGGPIGLMAACLDVAIPYVHERKQFGQPIGEFQLVQGKLADMYTVMNAARAYVYA 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A   D  ++  ++AA   + A        + A  +  +A++ +GG+GYI +    R  R
Sbjct: 307 VAAGCDRGQTTRKDAAGCVLFA-------AEKATQMALDAIQLLGGNGYINDYPTGRLLR 359

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 360 DAKLYEIGAGT 370


>gi|317127505|ref|YP_004093787.1| acyl-CoA dehydrogenase type 2 domain [Bacillus cellulosilyticus DSM
           2522]
 gi|315472453|gb|ADU29056.1| Acyl-CoA dehydrogenase type 2 domain [Bacillus cellulosilyticus DSM
           2522]
          Length = 392

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 121/277 (43%), Gaps = 28/277 (10%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI--AAITSQGQKISDGIYCLS 229
           + W P +F +  +      + K    I    +E+  G+        +   K  DG + ++
Sbjct: 104 QKWEPDVFGKVCES-----IVKEKTIINTAASERATGSPARGGKPETNALKKDDG-WIIN 157

Query: 230 GHKWFLS-SPMSDAFIMLAQV--EGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           G K F S +PM D  I+ A +  EG+  VG FL+ R         + Y+   + +G R  
Sbjct: 158 GRKTFTSLAPMLDWIIITATIDHEGKEQVGEFLLNR-----HEVNITYEETWDALGMRGT 212

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + +L   +TF     L+  ++ S+        L+++ +  + ++    +  +AI++A+ 
Sbjct: 213 RSDDLILKDTFVKGSSLVHVIDSSSSSKNAQGWLLHIPACYLGIA--LAARDDAINFAKT 270

Query: 342 RHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
              +     + + P ++R IA++ L +  A    + +A  +DE +   ++   A + A  
Sbjct: 271 YQPNSLPRPIAEVPEVQRKIAEMDLKLMKARHFMYHIATIWDENEEMRQQLG-AELAA-- 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            K  C   A  V+  A+  +GG    + +   R+YR+
Sbjct: 328 VKTVCTNAAIEVVDIALRIVGGQSLQKSKPFERYYRD 364


>gi|224044913|ref|XP_002194919.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 456

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 105/261 (40%), Gaps = 22/261 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVG 254
           LG++E   G+D+A I +   +  D      G  W  S   +D   +LA            
Sbjct: 196 LGISEDGAGSDVANIKTTAVRKGDEYVINGGKMWITSGSQADWMCLLANTSKGPPHQNKS 255

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +P  L      G+   +  +K+G RS+ T ++ F +       +L    G     ++
Sbjct: 256 LICLPMNLP-----GIHVAKKIDKLGMRSSDTAQIFFEDVR-VPCKNLIGEEGKGFTYQM 309

Query: 315 LIYLDSAIMSV----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L + +  +  V    + M   + E I Y  +R V G  ++    +   +A++A ++    
Sbjct: 310 LQFQEERLWGVATALTPMETIIQETIDYTGQRKVFGQPVLHNQTVHFRLAELATEVELLR 369

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L  R    + E    ++ A+ A++ A        ++   V    ++  GG G+  E  +
Sbjct: 370 SLLHRAVALYVEGNDVTKFASMAKLKA-------GRLTREVTDSCLQFWGGMGFTNEVLV 422

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR+    SI  G+   M+
Sbjct: 423 SRFYRDLRLMSIGGGTDETML 443


>gi|326317172|ref|YP_004234844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374008|gb|ADX46277.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 631

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 158/400 (39%), Gaps = 104/400 (26%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSS---PMSDAFI--MLAQ 248
           L+E + G+ ++ I ++     D          Y L+G+K ++SS    M++  +  +LA+
Sbjct: 159 LSEPQAGSSLSDIATRAVPDGDDFESDPLGPRYRLAGNKMWISSGDHEMTENIVHLVLAK 218

Query: 249 VEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF- 291
           + G  G           F+VP+ L D      G  N +    L +K+G R      L F 
Sbjct: 219 IPGPDGRPVPGVKGISLFIVPKHLVDTSGQLTGERNDVALAGLNHKLGWRGTTNTLLNFG 278

Query: 292 -------------------SNTFGFLLGDLNVSTGPVEDMK----------ILIYLDSAI 322
                              +   G+ +G      GP + +K          I I + + +
Sbjct: 279 EGTYPVRAGQGPGGLDGRGAGAIGYRVG------GPGDGLKCMFHMMNEARIGIGMAATM 332

Query: 323 MSVSGMRVSLAEAIHYARRRHV----SGGI-------------LIDQPVMKRAIADIALD 365
           + ++G R SL  A    + R +    +GG              LI+   ++R +      
Sbjct: 333 LGLAGYRASLQYAKDRTQGRPIVPRSAGGDGKAGKDASAPPVRLIEHADIRRMLLAQKSY 392

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA-YAR----IMAPITKYWCCKMAPAVIAEAMECIG 420
              A AL+   A   DE  + S EAA  AR    ++ PI K W  +      + A++  G
Sbjct: 393 GEGALALNLYCARLVDEQHTGSPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQIHG 452

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLG 477
           G GY  +  + +++R++  N I  G+     +D+L    ++E G  L  QL         
Sbjct: 453 GYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVVMEGGRGL--QLL-------- 502

Query: 478 SSGKKVITILR--DSISLCKEDKGLARFLTEKIALASSAA 515
            +G+   TI R  +   L      LAR L+E +  A+ AA
Sbjct: 503 -AGRVNATIQRAMERPELAAHANELARALSE-VGAATKAA 540


>gi|324999971|ref|ZP_08121083.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 388

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 39/273 (14%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSP 238
           REY P   A   + S+A+    TE  GGTD + A+T++ +K+ DG + + G K W   + 
Sbjct: 110 REYLPRLAAGDIRFSIAV----TEPGGGTDLLGAMTTRAKKV-DGGWVVKGQKMWSTGAK 164

Query: 239 MSDAFIMLA-----QVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            +   ++LA     +  G+       LVP      SP      R   K+G R+  + E+ 
Sbjct: 165 EATYLLILARSGDPEAPGKRAPTTLLLVP----TDSPG--IEMRYIPKLGMRAMGSCEVF 218

Query: 291 FSNTF---GFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             + F     LLG       V    + + +I+    S  +++  +   L E++ YA+ R 
Sbjct: 219 LDDVFVPDSQLLGTEHQGFRVLLASLNNERIM----SGALALGMLDGILEESVEYAKNRM 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G ++    +++  IAD AL    A  + F       +A  R          A + K  
Sbjct: 275 TFGRVIGGHQIIQHYIADTALGQKQAELMVF-------DAAWREASGMRCHQEANMVKVV 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++A +     ++ +GG G   E    R +R+
Sbjct: 328 TSELAVSAADRGIQILGGMGISSETHAQRFWRD 360


>gi|320012176|gb|ADW07026.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 408

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMRTQIDAARLLVWRASWMASA 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A +V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 333 GKP------FTAAEGSMSKLYASETAKSVTAQAVQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|229489143|ref|ZP_04383009.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324647|gb|EEN90402.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 391

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 30/249 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV-----EG-RV 253
           LTE   G++ A + ++   + DG  + + G+K F++ +P++  F++ A+      +G  +
Sbjct: 127 LTEPGAGSNPAGLRTK--AVLDGSDWVIDGNKRFITNAPLAQLFVVFARTRPADSDGPGI 184

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPV 309
             FLVP         G+       K+G     T E+ F N        + GD +  TG  
Sbjct: 185 AVFLVP-----ADTPGVTVGPKDKKMGQEGAWTSEVTFDNVRVPESALVGGDQD--TGYR 237

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M  L    +  A +SV   + +L E++ ++      G  + D  +++  +AD    + 
Sbjct: 238 AAMTSLARGRVHIAALSVGAAQRALDESVAFSVVTEQGGTAIGDFQLVQAMLADQQAGVM 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+   +A  +   + R       R+     K +C +M   V   A++  GG+GY+  
Sbjct: 298 AGRAMVREVAARYVSGEDR-------RLGPSAAKLFCTEMVGKVADLAVQIHGGNGYMRG 350

Query: 428 RSIARHYRE 436
             + R YRE
Sbjct: 351 VPVERIYRE 359


>gi|149204242|ref|ZP_01881209.1| putative acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149142127|gb|EDM30174.1| putative acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 394

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 58/267 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   GTD  A+ +  ++  D  Y ++G K W      SD  ++LA+          
Sbjct: 123 FGVTEPTSGTDTLALKTNARRDGDA-YVINGQKIWTSRVEHSDLMVLLART--------T 173

Query: 259 PRLLEDGSPNGLCY--QRLKNKIGNR----------SNATVELEFSN------------- 293
           PR       +GL      L+ K+G+           ++AT E+ F N             
Sbjct: 174 PREEAKSKTDGLSVFLIDLRGKVGHGIDIRPIRTMINHATTEVFFDNLRIPADCLIGDEG 233

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILID 351
             F ++L  +N         +ILI    A   +   +  L     YAR R V G  I ++
Sbjct: 234 KGFRYILSGMNSE-------RILI----AAECIGDAKWFLRTGSDYARERVVFGAPIGVN 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           Q V +  +A     + AA A+ +R A  +D   +   EA  A+++A    +         
Sbjct: 283 QGV-QFPLARAQAHMMAAEAIVYRAAAMYDAGHNPGVEANAAKLLASEASWEA------- 334

Query: 412 IAEA-MECIGGSGYIEERSIARHYRES 437
            AEA M+  GG  + EE  + R +RE+
Sbjct: 335 -AEACMQTHGGFAFAEEYDVERKFREA 360


>gi|256371122|ref|YP_003108946.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007706|gb|ACU53273.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 404

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 35/311 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  + S +    TP    +W P+ F     P   A            ++E   G+D++++
Sbjct: 92  STLAVSGIVANGTPEQIAEWVPQCFGTADHPNLAA----------FCVSEPDAGSDVSSL 141

Query: 215 TSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++     +   + L+G K W  +  ++D  +++A VE  +G       +   +  GL  
Sbjct: 142 RTRAVYDPATDTWTLNGTKTWITNGGIADIHVVVASVEPELGARGQASFVIAPNTPGLRM 201

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLG-----DLNVSTGP----VEDMKILIYLDS 320
            +   K+G R++ T E+   +       LLG     D  ++        +    +   ++
Sbjct: 202 GQKFKKMGIRASHTAEVILEDVRLPGSALLGGKERLDERLARAREGKRAQSQAAMATFEA 261

Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +   V    V +A A     + YA+ R   G  +I+   +   +AD+AL +  A  L  R
Sbjct: 262 SRPLVGAQAVGIARAAYEWALDYAKERVQFGRPIIENQGIAFKLADMALAVDTARLLVHR 321

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A    + + R E A        + K    ++A  V  EA++ +GG GY+ E  + R +R
Sbjct: 322 AAWMAAQGQ-RFEHAE-----GSMAKLHAGEVAVRVTEEAIQILGGYGYVRENPVERWHR 375

Query: 436 ESPANSILLGS 446
           ++   +I  G+
Sbjct: 376 DAKIYTIFEGT 386


>gi|167524677|ref|XP_001746674.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774944|gb|EDQ88570.1| predicted protein [Monosiga brevicollis MX1]
          Length = 509

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 29/238 (12%)

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K F+S    SD ++++ +  G  G     CF+V    E  +P GL Y + + K+
Sbjct: 276 FVLNGTKAFISGGGESDVYLVMTRT-GSAGAKGISCFIV----EKDTP-GLSYGQKERKL 329

Query: 280 GNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           G  S  T       V +  SN  G      N++   +   +I I    A  S+ G + SL
Sbjct: 330 GWNSQPTRQVIMEDVRVPASNMLGGEGKGFNIAMAGLNGGRINI----ASCSLGGAQASL 385

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R   G  + D   ++  +A+ A  + A+  +  RLA    +AKS +  A  
Sbjct: 386 EGTLEYTSDRKQFGRAINDNQAVQFRLAEYATGLTASRQM-LRLAARELDAKSSAAPALC 444

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A     +T   C      ++   ++  GG GY+++  I +  R+   + IL G+   M
Sbjct: 445 AMAKLEVTDR-CFD----IVNGCLQLHGGYGYLKDYKIQQFLRDLRVHQILEGTNEVM 497


>gi|47209002|emb|CAF95465.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 361

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 47/259 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I ++  K+ +  Y ++G K W  +   ++ + +LA+      C     
Sbjct: 120 VTEPGAGSDVAGIKTRAVKMGNE-YIVNGQKMWITNGGKANWYFLLARTNPDPKCSASKA 178

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R         S+T G    D+ +   PVE++
Sbjct: 179 FTGFIV-----DADTPGIQPGRKELNMGQRC--------SDTRGITFEDVRI---PVENV 222

Query: 313 KI---------LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
            I         +   D+    V+     LA     EA  YA  R   G ++ +   +   
Sbjct: 223 LIAEGAGFKIAMGAFDNTRPPVAAGATGLAQRALDEATKYALERKTFGKLIAEHQAVSFM 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+ +  A     R A   D+    +         A I K +   +A  V A+A++ 
Sbjct: 283 LADMAMKVELARMAYQRAAWEVDQGHRNT-------YYASIAKAFAGDIANQVAADAVQI 335

Query: 419 IGGSGYIEERSIARHYRES 437
            GG+G+  +  + +  R++
Sbjct: 336 FGGNGFNSDYPVEKLMRDA 354


>gi|206588139|emb|CAQ18715.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 3162

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244
           P   T  AIG   LTE + G++   + ++   + DG + L+G K F++    + ++  F 
Sbjct: 112 PDLATGRAIGAFCLTEPQAGSEANNLRTRA-VLRDGRWVLNGSKQFVTNGTRAKLAIVFA 170

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +     G+ G   F+VP         G    R ++K+G R++ T  +   +     +   
Sbjct: 171 VTDPGAGKRGLSAFIVPT-----DTRGFHVGRPEHKLGIRASDTCPITLEDC---AVPQA 222

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMK 356
           N+   P E +KI L  L+   + ++   V +A A   A       R   G  L +   + 
Sbjct: 223 NLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L    A      K    EA+ A       K +  ++A  + ++A+
Sbjct: 283 NMLADMATRLNAARLLVHHAARLRSLDKPCLSEASQA-------KLYASELAEEICSKAI 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+ + ++ RHYR++    I  G+
Sbjct: 336 QIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|108799943|ref|YP_640140.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869053|ref|YP_939005.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770362|gb|ABG09084.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695142|gb|ABL92215.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 412

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 37/258 (14%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQV-EG--------RVGCFLVPRLLEDGSPNGLCYQRL 275
           Y L+G K F+++ P +D  ++ A++ EG        +V  F++ R +E     G    + 
Sbjct: 170 YILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTFVLDRGME-----GFVQSKP 224

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
             K+G  S+ T EL F+N     LG   +  G  ED +     +SA  S S  R+ +A  
Sbjct: 225 FRKMGIHSSRTGELFFNNV---RLGRDRL-LGETEDNEAGDGRESARSSFSAERIGVAAM 280

Query: 335 -----------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                      ++ YA+ R + G  +    +++  +A + +       + FR+     EA
Sbjct: 281 ALGVIEECLKLSVDYAKSRTLWGKEIGQFQLIQLKLASMEVARMNVRNMLFRVI----EA 336

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  + A   A   K++C + A  V  EA++  GG+GY+ E  + +  R++ +  I 
Sbjct: 337 SQTGTPISLAE--ASAIKWYCSQAATDVAMEAVQLFGGNGYMTEYRVEQLARDAKSLMIY 394

Query: 444 LGSGNAMVLDVLNLLEKG 461
            GS    +  V   L  G
Sbjct: 395 AGSNEVQITHVAKGLLSG 412


>gi|167905755|ref|ZP_02492960.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
 gi|254182383|ref|ZP_04888978.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|184212919|gb|EDU09962.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
          Length = 377

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP      +P G    + + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVP----TDTP-GFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TRINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLVDYEVERHYRDARITQIYEGT 365


>gi|222480983|ref|YP_002567220.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453885|gb|ACM58150.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 386

 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 15/249 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T  A+G  GLTE   G++ +A+ ++ +   D  Y L+G K W  +SP++D  ++ A
Sbjct: 116 PKLGTGEAVGCFGLTEPEHGSNPSAMETRAEADGDD-YVLNGSKTWITNSPIADVAVVWA 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +     G  +   L+E    +G+   ++  K+  R++ T E+   +       +L ++  
Sbjct: 175 KDHTEEGTPVRGFLVET-DRDGVTTNKIDEKLSLRASITGEISLQDVHVPAENVLPEVTG 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             GP+  +    Y   A  +V         A  YA  R   G  +    + ++ +A++A 
Sbjct: 234 MKGPLSCLTQARY-GIAWGAVGAAMDCFEVAREYATDREQFGKPIGGFQMQQQKLAEMAT 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  L+ RLA+  +  + R +  + A+     T     ++       A E +GG+G 
Sbjct: 293 QITLAQLLAHRLADLKEAGEMRPQHVSMAKRNNVRTARDQSRI-------AREMLGGNGI 345

Query: 425 IEERSIARH 433
             + S  RH
Sbjct: 346 TADYSPMRH 354


>gi|86157842|ref|YP_464627.1| acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774353|gb|ABC81190.1| Acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 649

 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+D A + +  ++  DG  Y L+G K W  +  +++  +++A+      +  
Sbjct: 170 FALTEANVGSDPARLATTAERSPDGTHYVLNGAKLWCTNGTIAELLVVMARDPRTDAISA 229

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+V    E   P      R +  +G R+ A   L F++     +   N+       +KI 
Sbjct: 230 FVV----ETSWPGVEVTHRCRF-MGLRAIANAALRFTDV---KVPAENLIGKEGRGLKIA 281

Query: 315 LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L++  +S+      G++ +LA +  +A  R   G  +     +   +AD+A    A 
Sbjct: 282 LTTLNTGRLSLPAAVAGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAM 341

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A+S       D A+S ++   Y  R+ A   K W    A  +I E M+  GG GY  ER
Sbjct: 342 EAVS-------DLAQSLADHEGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETER 394

Query: 429 SIA----------RHYRESPANSILLGSGNAMVL 452
           S+A          R  R++  N I  GS   M L
Sbjct: 395 SLAARGETPVGVERWMRDARINLIFEGSSEIMHL 428


>gi|70992255|ref|XP_750976.1| acyl-CoA dehydrogenase family protein [Aspergillus fumigatus Af293]
 gi|66848609|gb|EAL88938.1| acyl-CoA dehydrogenase family protein [Aspergillus fumigatus Af293]
          Length = 512

 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 245 LAITEAFAGSDVAGLKTTAKKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFSVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR        G+  +++K      + AT  ++F N        + V     E+ K  I 
Sbjct: 305 IPR------GEGVETKQIKTSYST-AAATAFVQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSAI------MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S        M  + +R+ +    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 352 IMSNFNHERFTMVCAVIRMCMTVTEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      + +++AA+      + K    + A  +   A    GG G 
Sbjct: 412 NQAWLESIAYQMCNM-----TYAQQAAHLGGPIGLLKSHATRCAQEIADHATNIFGGRGI 466

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 467 TQSGMGKVIEMFHRTYKFDAILGGT 491


>gi|325969829|ref|YP_004246021.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
 gi|323709032|gb|ADY02519.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
          Length = 386

 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 32/275 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252
             L+E   G+D AAI ++ ++   G + ++G K W      +D +I+  +    E R   
Sbjct: 127 FALSEPCCGSDAAAIETRAER-RGGEWVINGKKMWITQGLYADVYIVFTRTGPKEARHKA 185

Query: 253 VGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           V  FL+ R    + SP  +        +G R   T EL F++    ++GD ++   P E 
Sbjct: 186 VTAFLLRRNKCIEASPIYV--------MGIRGTGTSELTFNDC---VVGDDDIVGKPNEG 234

Query: 312 MKILIYLDS----AIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +I +   +    A++SV+ G+   +L EA+ + + R      L D   ++  +ADI   
Sbjct: 235 FRIAMEALNLGRIAVVSVTLGLAEAALTEALGWVKNRRAFNQQLSDLEWVQFQLADIMAY 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    ++ +  A+ FD    R  E  YA   A I K     +   +I  A++  G  G  
Sbjct: 295 METMRSIVYDAASRFD----RKYEDYYA--FASIAKLTSVLIGMDIIRRAVQLTGAYGVW 348

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + R YR++    I  G+     + +   L K
Sbjct: 349 SNSKLNRIYRDAKLMEIGEGTNEVQRMVIYKWLSK 383


>gi|146161808|ref|XP_001033489.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|146142823|gb|EAR85826.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 411

 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 24/249 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VE-GRVGCF 256
           G GLTE + G+D  ++ +  QK ++G + L+G K ++ +   D  ++ A+ VE  ++  F
Sbjct: 147 GWGLTENKFGSDATSLQTTVQK-TEGGWLLNGDKTWIGNGNRDIMVVWARNVENNKIQGF 205

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK--I 314
           +V     D    G+  + LK+K+  R     ++ F+N F   + + N+ +   +  K   
Sbjct: 206 IV-----DLKAKGVRSEVLKHKLALRIVQNCQITFTNVF---IPEENMLSKATDFQKGTA 257

Query: 315 LIYLDSAIMS---VSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            I L S +M    V+G+ + + +  I Y   R   G  +    + +  +A I  +  A  
Sbjct: 258 KILLHSRLMVCWLVAGICMGVYDNVIKYISNRKQFGVPISSFQLQQEKLARIMSNTQAIL 317

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + R++  +D  K    + A A       K +C + A  V     E +GG+G I +  +
Sbjct: 318 LFAHRISQMYDNKKITLGQVALA-------KAFCTERAREVARLGREMLGGNGIIFDNYV 370

Query: 431 ARHYRESPA 439
            + + +  A
Sbjct: 371 MKAFADIEA 379


>gi|265983201|ref|ZP_06095936.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839983|ref|ZP_07472777.1| isovaleryl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264661793|gb|EEZ32054.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306404947|gb|EFM61232.1| isovaleryl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 392

 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELMFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERKQ-----FDQPIGEFQLMQGKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|296164083|ref|ZP_06846704.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295900561|gb|EFG79946.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 312

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
           + W PK+ S E               IG + +TE   G+D+ ++ ++   + DG  Y ++
Sbjct: 110 RQWLPKMASGEL--------------IGAIAMTEAGTGSDLQSVKTRA--VLDGDEYVIT 153

Query: 230 GHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++   +D  +++A+ +   G   +  ++ +    G    R+ +KIG R   T E
Sbjct: 154 GSKTFITNGQQADLIVVVAKTDHTQGANGISLIVVEADRPGFRRGRVLSKIGQRGQDTSE 213

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F         LLGD     G ++ M  L    L  A+ +V+ M ++L + + Y R R 
Sbjct: 214 LFFDGVRVPKTHLLGDTE-GQGFIQLMTQLPQERLIVAVGAVAAMELALQQTVKYTRERE 272

Query: 344 VSGGILIDQPVMKRAIADIALD 365
             G  +      K  +A+ A +
Sbjct: 273 AFGRTIFGFQNTKFTLAEAATE 294


>gi|255602664|ref|XP_002537898.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223514657|gb|EEF24486.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 149

 Score = 44.3 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 7/126 (5%)

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A ++V   +  L  A+ YA+ R   G  + +   ++  +AD+A DI AA  L        
Sbjct: 12  AALAVGIAQAGLEAALEYAQTRKQFGSHIAEFQGVQWMLADMAKDIRAARLL-------V 64

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +A  R E    A I   + K +    A    A A++  GGSGYI    + R YR++   
Sbjct: 65  HDAAERLETGDRASIACSMAKCFAGDTAVKHSANAVQIFGGSGYIRGYEVERLYRDAKIT 124

Query: 441 SILLGS 446
            I  G+
Sbjct: 125 QIYEGT 130


>gi|108798574|ref|YP_638771.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867673|ref|YP_937625.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768993|gb|ABG07715.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693762|gb|ABL90835.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 467

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 17/219 (7%)

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           + G Y L+G K  + +   ++ FI+ AQ++G+   F+V     + +  GL        +G
Sbjct: 249 TPGGYRLTGTKSLVPAAADAEVFIVAAQLDGKPALFIV-----ESASKGLTVTP-DPSMG 302

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R+ A   +E  N     G  LG+   +     +   L  L  A ++V      L   + 
Sbjct: 303 VRAAALGRVELDNVAVPLGNRLGEDGATDEDYREAIALSRLGWAALAVGTSHAVLDYVVP 362

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ + 
Sbjct: 363 YVKEREAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPYAREAALAKRLG 422

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                        +  + ++ +GG GY +E  + R YR+
Sbjct: 423 -------TDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 454


>gi|253700009|ref|YP_003021198.1| Butyryl-CoA dehydrogenase [Geobacter sp. M21]
 gi|251774859|gb|ACT17440.1| Butyryl-CoA dehydrogenase [Geobacter sp. M21]
          Length = 379

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 35/296 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           F  E       P   T   IG   LTE   G+D  AI +  ++  D  + ++G K F+++
Sbjct: 101 FGTEEQKKKWLPDLNTGKVIGCFLLTEPDAGSDAGAIATTYKRDGDH-FVINGSKIFITN 159

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  ++ A  +  +    V   + D    G+   + + K+G R         S T  
Sbjct: 160 GGYKGTGVLFATSDKSLKHKGVSAFIIDLQTPGVEILKNEKKLGIRG--------SYTTA 211

Query: 297 FLLGDLNVSTGPVEDM--------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           F L  + +   PVE++        KI +  L+   + ++   + +AE     A+ Y++ R
Sbjct: 212 FALDSVRI---PVENLLGQEGQGFKIAMDTLNGGRIGIASQALGIAEGAFDLALAYSKER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  +AD+   I  +  ++++ A   D  K+ + E+A  +++A     
Sbjct: 269 KQFGHPICELQAIQFKLADMYAKIETSKLMTYKAACLKDGKKNYTMESAMCKMLAS---- 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + A  V  EA++  GG G+I +  + R YR++    I  G+     + V  LL
Sbjct: 325 ---EAATFVTKEAIQIHGGYGFIVDYEVERMYRDAKITEIYEGTNEVQRVVVSKLL 377


>gi|145224121|ref|YP_001134799.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145216607|gb|ABP46011.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 413

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 39/277 (14%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGI--YCLSGHKWFLSS-PMSDAFIMLAQVEG------ 251
           +TE   G+D    + S   + +DG   Y L+G K F+++ P +D  ++ A+++       
Sbjct: 145 ITEPDSGSDAFGGMKSWVARAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEPGVDKR 204

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             +V  F++ + +E     G    +   K+G  S+ T EL F+N     LG   +  G  
Sbjct: 205 DRKVLTFVLDKGME-----GFVQSKPFRKMGIHSSRTGELFFNNV---RLGRDRL-LGET 255

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKR 357
           E+ +     DSA  S S  R+ +A             ++ YA+ R + G  +    +++ 
Sbjct: 256 ENNEAGDGRDSARSSFSAERIGVAAMALGVIEECLRLSVDYAKTRKLWGQEIGQFQLIQL 315

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A + +       + FR+  S       S   A A       K++C + A  V  +A++
Sbjct: 316 KLATMEVARMNVRNMLFRVIESSQSGAPISLAEASA------IKWYCSQAATDVAMDAIQ 369

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG+GY+ E  + +  R++ +  I  GS    +  V
Sbjct: 370 LFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHV 406


>gi|255954461|ref|XP_002567983.1| Pc21g09440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589694|emb|CAP95841.1| Pc21g09440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 425

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 6/237 (2%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M K  +   LG+TE   G+D+A IT+  ++  D        KW  +   +D F   A   
Sbjct: 145 MLKGKIRFCLGVTEPDAGSDVAGITTVAERKGDAYIVNGAKKWITNGIFAD-FCTAAVRT 203

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
           G  G   +  L+      G+  ++++N  G  ++ +  +EF         LLG+ N    
Sbjct: 204 GGSGTHGISALVIPMKAPGVICRKIENS-GVHASGSTYIEFDQVEVPVDNLLGEENKGFP 262

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +      L  A  S+   RV   +A  +A  R   G  LI+  +++   + +A  + 
Sbjct: 263 VIMNNFNHERLWLACTSLRMARVCAEDAYQHAITRETFGKRLIENQIIRSKFSAMARSLD 322

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A   +L    + AK    +A    + A + K    +    V  E+ + +GG GY
Sbjct: 323 SNYAWMEQLVYIAEIAKKEGTDAGTGGLFANL-KVLAGQTLEKVNRESQQVMGGLGY 378


>gi|148257884|ref|YP_001242469.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410057|gb|ABQ38563.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 54/265 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
            G+TE   GTD +++ +  ++  D  Y ++G K W   +  SD  I+LA      Q + R
Sbjct: 123 FGVTEPTSGTDTSSLKTFAKRDGDS-YIVNGQKIWTSRAEYSDLMILLARTTPKDQAQKR 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  F+V   + +    GL  + ++  +   ++AT E+ F++               F
Sbjct: 182 TDGLSVFIVD--MREAKKAGLTIRPIRTMM---NHATTEVFFTDMRVPAENLIGEEGKGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   V   +  +A+A +YA+ R V G  +     +
Sbjct: 237 RYILSGMNAE-------RILI----AAECVGDAKWFIAKATNYAKERVVFGRPIGQNQGI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +       ++  +    EA  A+++A          A A    A
Sbjct: 286 QFPIAKAYASMRAAELMVKEATRKYEAGQDCGAEANMAKMLA----------ADASFEAA 335

Query: 416 MECI---GGSGYIEERSIARHYRES 437
             CI   GG G+ EE  + R +RE+
Sbjct: 336 NACIQTHGGFGFAEEYDVERKFRET 360


>gi|295395552|ref|ZP_06805746.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971571|gb|EFG47452.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 391

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 39/259 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEGRV 253
            GLTE   G+D A  T     + +G + ++G K F+++  +D      A  +     GR 
Sbjct: 127 FGLTEAEAGSD-AGGTKTKAVLENGEWVINGSKQFITNSGTDITRLVTATAVTGTRTGRD 185

Query: 254 G-------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           G         ++P     G+P G   +   +K+G  S+ T  L F N       LLG+  
Sbjct: 186 GKEKPEISTIMIPT----GTP-GFTAEPAYDKVGWNSSDTHPLTFDNVRVPEENLLGERG 240

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358
                      L  LD   ++V+ + V  A     E++ YA+ R   G  + +   ++  
Sbjct: 241 RGYA-----NFLRILDEGRIAVAALSVGAAQGCVDESVRYAKERVTFGKPIANYQGIQFK 295

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA +   + AA A  +  A+  +      +EAA A+++A        +       +A + 
Sbjct: 296 IARMEARVVAARAAYYLAASRMESGLPFKKEAAVAKLIAGDAAMDNAR-------DATQI 348

Query: 419 IGGSGYIEERSIARHYRES 437
            GG G++ E  +ARHYR+S
Sbjct: 349 FGGYGFMNEYLVARHYRDS 367


>gi|126444479|ref|YP_001061917.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126223970|gb|ABN87475.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F+++       ++  V    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAVTDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP      +P G    R + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVP----TDTP-GFIVGRPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TRINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLADYEVERHYRDARITQIYEGT 365


>gi|260828849|ref|XP_002609375.1| hypothetical protein BRAFLDRAFT_98992 [Branchiostoma floridae]
 gi|229294731|gb|EEN65385.1| hypothetical protein BRAFLDRAFT_98992 [Branchiostoma floridae]
          Length = 394

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 33/272 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M +  +    G+TE   G+D+A I ++  K  D  Y L+G K W  +   ++ + +LA+ 
Sbjct: 119 MTEEPLMCAYGVTEPGAGSDVAGIKTKAVKKGDE-YILNGQKMWITNGGHANWYFVLART 177

Query: 250 E-------GRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294
                   G+    F+V R  E  +P      R +  +G R++ T  + F        N 
Sbjct: 178 SDDPKMPAGKAFTGFIVDREWEGVTPG-----RKEWNMGQRASDTRGITFEDVRVPAENV 232

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            G       ++ G  +  +  +   +  ++    + +L EA  YA  R   G  + +   
Sbjct: 233 LGAEGMGFKIAMGAFDKTRPPVAAGATGLA----QRALDEATKYALERKTMGKYIAEHQA 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +A++A+ +  +  L+ R A   D+ +  +         A I K +    A     +
Sbjct: 289 IGFMLAEMAIMVETSRLLTQRSAWEIDQGRRNT-------YYASIAKAYAGDAANKCATD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG+G+  +  + +  R++    I  G+
Sbjct: 342 AVQIHGGNGFNSDYPVEKLMRDAKIYQIYEGT 373


>gi|56478072|ref|YP_159661.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314115|emb|CAI08760.1| Acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase
           [Aromatoleum aromaticum EbN1]
          Length = 397

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 112/283 (39%), Gaps = 23/283 (8%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           K + PK+ S E+              +G L ++E   G+D+ ++  +  +  D  + L+G
Sbjct: 113 KKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKLRADRRGD-RFVLNG 157

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W  +   +D  ++ A+ +   G   +   + +    G  +    +K+G R + T  L
Sbjct: 158 AKMWITNGGDADTLVVYAKTDIDAGPRGITAFIVEKGMKGFTHGTHLDKLGMRGSNTFPL 217

Query: 290 EFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRH 343
            F +        L G  NV  G    M  L Y  + +    +  M   +   + Y   R 
Sbjct: 218 FFDDVEVPEENVLGGVANVGQGVKVLMSGLDYERAVLCGGPLGIMAACMDAVVPYLHERK 277

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
                + +  +M+  +AD+     A  A  + +  + D     S+ A   R  A     +
Sbjct: 278 QFNQPIGEFQLMQGKLADMYSTWMATRAYVYAVGQACDSLTKMSDHARTLRKDAAGAILY 337

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             + A  +  EA++ +GG GY  E  + R +R++    I  G+
Sbjct: 338 SAEKATWMAGEAIQTLGGVGYTNEYPVGRLWRDAKLYEIGAGT 380


>gi|33595315|ref|NP_882958.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565392|emb|CAE36198.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
           +G+TE   G+D   + +   K  DG + ++G K W      SD  I+LA      QV+ R
Sbjct: 123 MGVTEPTTGSDTTKLKTTAVK-KDGRWVINGQKVWISRVQHSDLLILLARTTPVEQVQKR 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVS 305
              + CF+V   L+    NGL  + + N + + +N      +EL      G     L V 
Sbjct: 182 SDGLSCFIVE--LDKAIGNGLTVRPILNMVNHETNELFFDNLELPEDALLGAEGKGLKVI 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   + LI    A   +      L +A  YA  R V G  +     ++  +A+  ++
Sbjct: 240 FEGLNAERTLI----AAECIGDGYWFLEKARDYANERKVFGRPIGQNQGIQFPLAECFIE 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  + ++  +  D  ++       A + A + KY   K +       ++  GG G+ 
Sbjct: 296 LEAANLMRWQACSKIDARQN-------AGVEANMAKYLAAKASWEAANACLQTHGGFGFA 348

Query: 426 EERSIARHYRES 437
            E  +   +RE+
Sbjct: 349 CEYDVEWKFRET 360


>gi|226308698|ref|YP_002768658.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187815|dbj|BAH35919.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 30/255 (11%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR- 252
           V     LTE   G++ A + ++   + DG  + + G+K F++ +P++  F++ A+     
Sbjct: 118 VVASFALTEPGAGSNPAGLRTK--AVLDGSEWVIDGNKRFITNAPLAQLFVVFARTRPAD 175

Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLN 303
                +  FLVP         G+       K+G     T E+ F N        + GD +
Sbjct: 176 SDGPGIAVFLVP-----ADTPGVTVGPKDKKMGQEGAWTSEVTFDNVRVPESALVGGDQD 230

Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             TG    M  L    +  A +SV   + +L E++ ++      G  + D  +++  +AD
Sbjct: 231 --TGYRAAMTSLARGRVHIAALSVGAAQRALDESVAFSVVTEQGGTAIGDFQLVQAMLAD 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               + A  A+   +A  +   + R       R+     K +C +M   V   A++  GG
Sbjct: 289 QQAGVMAGRAMVREVAARYVSGEDR-------RLGPSAAKLFCTEMVGKVADLAVQIHGG 341

Query: 422 SGYIEERSIARHYRE 436
           +GY+    + R YRE
Sbjct: 342 NGYMRGVPVERIYRE 356


>gi|239820863|ref|YP_002948048.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239805716|gb|ACS22782.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 387

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 14/236 (5%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D + + +  ++   G + ++G KWF+S  +  AF ++    G      +   ++
Sbjct: 134 EPGAGSDPSMLQTVAERRPGG-WVINGRKWFISGAVGAAFALVLAKTGEGATIFI---VD 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
            G+P     + + +  G +     E+E  + F   G +LG++       +       L  
Sbjct: 190 AGNPGYRVVRNIASIDGFQIGGHGEIELQDCFVDDGAVLGEVGRGFAYAQARLEPARLSH 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +  +     ++A A  YA RRH  G  L     ++  ++D  +D+ AA  +++  A   
Sbjct: 250 CMRFIGRASRAMALAQDYANRRHSFGQPLAQLQQVQAMVSDSHIDLHAARLMTWHAAAKL 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           D  +    E+A       + K +  +    V   A + +G  G  E+  ++   RE
Sbjct: 310 DAKQGIKHESA-------MVKVFVSEAVGRVADRAAQIMGALGMSEDSPVSMILRE 358


>gi|255946537|ref|XP_002564036.1| Pc20g15640 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588771|emb|CAP86893.1| Pc20g15640 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 49/261 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  ++  DG Y LSG K W  ++  +D  ++L +   R      
Sbjct: 160 FGVTEPNTGLDTLQLQATARRSRDG-YVLSGQKVWISTAQRADKILILVRTTPR------ 212

Query: 259 PRLLEDGSPNGLCYQRLK---------NKIGNRSNATVELEFSN--------------TF 295
            R+ +      L Y  L+          K+G  +  T  L F N               F
Sbjct: 213 DRVKKPSQGLSLFYTDLQVPEVQITEIPKMGRAAVDTNSLFFDNWHVSMEDRVGEENEGF 272

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             +L  +N         +ILI  ++  +  + +R     A  Y+  RHV G  +     +
Sbjct: 273 RMILHGMNAE-------RILIGAEALGLGFAALR----RAALYSNNRHVFGRPIGQNQGI 321

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD  + + AA  + ++ A  +D+  +  E A   + +A    +  C+        A
Sbjct: 322 QHPLADSWMKLEAARMMIYQAARLYDQGYTGGEYANAGKYLAAEAAFEGCE-------RA 374

Query: 416 MECIGGSGYIEERSIARHYRE 436
           +   GG GY +E  + R+ RE
Sbjct: 375 ILTHGGMGYAKEYHVERYLRE 395


>gi|148554766|ref|YP_001262348.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499956|gb|ABQ68210.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 396

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 41/262 (15%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           ++ +++ PKI + E             +   LG +E   G+D+A++  + ++  D  + L
Sbjct: 113 KLKREFLPKILAAE-------------IEFALGYSEPGAGSDLASLRLRAERRDDA-WVL 158

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G K W  S+  +D + + A+ +        +  FLVP      +  GL    ++    +
Sbjct: 159 NGQKMWTTSAHFADWYWVAARTDPDAPKHKGISVFLVPM-----NHPGLTIVEIETMGDH 213

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+N   E+ F N      +L+G  N     V   + L Y   A+ +V  + +     +  
Sbjct: 214 RTN---EVFFDNVEVPADYLVGQENAGWQYV--CEALDYERFALYTVGPLLLRFEALVEL 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            RR    G  L D P ++  IA++A ++  A  L  R+     +    + EAA       
Sbjct: 269 VRRTERDGRPLADDPAVRARIAELACEVETARMLQRRVIAKAIKGDVPTVEAA------- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIG 420
           + K +  ++   +  EA++ +G
Sbjct: 322 MYKLYSTQLGRRIANEALDWLG 343


>gi|6680618|ref|NP_031408.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Mus musculus]
 gi|1168284|sp|P45952|ACADM_MOUSE RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|463909|gb|AAA76733.1| medium-chain acyl-CoA dehydrogenase [Mus musculus]
 gi|148679949|gb|EDL11896.1| acyl-Coenzyme A dehydrogenase, medium chain [Mus musculus]
          Length = 421

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC--F 256
           +TE   G+D+AAI ++ +K  D  Y ++G K W  +   ++ + +LA+   + +V     
Sbjct: 160 VTEPSAGSDVAAIKTKAEKKGDE-YVINGQKMWITNGGKANWYFLLARSNPDPKVPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   + +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIHIGKKELNMGQRCSDTRGIAFEDV---RVPKENVLIGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 275 GAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG G+  E  +
Sbjct: 335 LSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|306842687|ref|ZP_07475330.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306287133|gb|EFM58635.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 389

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 45/294 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 110 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 154

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 155 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 214

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 215 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 270

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 271 YVHERK-----QFDQPIGEFQLMQGKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 326 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEIGAGT 372


>gi|121699852|ref|XP_001268191.1| acyl-CoA dehydrogenase family protein [Aspergillus clavatus NRRL 1]
 gi|119396333|gb|EAW06765.1| acyl-CoA dehydrogenase family protein [Aspergillus clavatus NRRL 1]
          Length = 512

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +   K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 245 LAITEAFAGSDVAGLKTTATKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFTVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR       +G+  +++K      + AT  ++F N        + V     E+ K  I 
Sbjct: 305 IPR------GDGVETKQIKTSYST-AAATAFVQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSAI------MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S        M  + +R+ +    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 352 IMSNFNHERFTMVCAVIRMCMTVTEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      + +E+AA+      + K    + A  +   A    GG G 
Sbjct: 412 NQAWLESIAYQMCNM-----TYAEQAAHLGGPIGLLKSHATRSAQEIADYATNIFGGRGL 466

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 467 TQTGMGKVIEMFHRTYKFDAILGGT 491


>gi|33603683|ref|NP_891243.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577808|emb|CAE35073.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 23/258 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           AP        G GL+E  GG+++ A+ ++ +++  G + L G K +++ +P +D  ++ A
Sbjct: 114 APALAGGKVAGFGLSEPDGGSNVRAMKTRAERVEGG-WRLHGSKLYITNAPFADFLLVAA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +    +    +   + +    G    +LK K G R++ T  +   N F     LLG+   
Sbjct: 173 RTSAALKPESISLFIVELPNAGFDIAKLK-KEGIRASETALIHIDNAFVPDDCLLGETE- 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359
            T P+    IL  L    + V+   + +A A   A       R V+G  + +   +   +
Sbjct: 231 GTYPL----ILESLSENRVGVAANALGMARAAFDAAASFANDRLVAGKRVGEYQAIAHKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD++  I AA  L +  A   D+    +  AA  +++A  T       A AV  +A+   
Sbjct: 287 ADMSAQIEAARWLVYYGAWRVDQGTLDAATAARVKLVASET-------AVAVSEQAIRIF 339

Query: 420 GGSGYIEERSIARHYRES 437
           GG+G + E  + R +R++
Sbjct: 340 GGAGIMREYPVGRIHRDA 357


>gi|284041670|ref|YP_003392010.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283945891|gb|ADB48635.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 406

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 31/271 (11%)

Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D AAI T+       G Y L+G K +++S   +D  ++ A ++  +G   
Sbjct: 134 MAITEPEAGSDSAAIRTTAVLDRETGEYVLNGEKIYVTSGERADLVVVWATLDRSLGRAA 193

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
           +   + + S  G+   RL++K+G R++ T      N     +   N+   P  D+K    
Sbjct: 194 IKSFVVERSNPGMILDRLEHKLGIRASDTAAFRLENCR---VKPENLLGSPEVDVKRGFA 250

Query: 314 -ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIA-------DIAL 364
            ++   D+    V+ M V L  A +   +      G+ +D     ++          +  
Sbjct: 251 GVMQTFDNTRPLVAAMAVGLTRACLEQTKELLAEAGVEVDYDKPAQSQPAAAAEYLSMEA 310

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GG 421
           D  AA  L+       D +K  S +A+YA+  A  T   C  +       AM C+   G 
Sbjct: 311 DYEAARLLTLEATWMADNSKPNSLQASYAKAKAGRT---CVDV-------AMRCVRLAGS 360

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVL 452
            GY EE  + +  R+     I  G+    +L
Sbjct: 361 RGYGEELLLEKWARDGKILDIFEGTQQIQLL 391


>gi|83718149|ref|YP_439997.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167578540|ref|ZP_02371414.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
 gi|167616683|ref|ZP_02385314.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257143178|ref|ZP_05591440.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651974|gb|ABC36038.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP         G    + + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENC---AIPQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TQINAARLLTHHAARLRTAGLPCLSEASQAKLFAS-------EMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLVDYEVERHYRDARITQIYEGT 365


>gi|315050013|ref|XP_003174381.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
 gi|311342348|gb|EFR01551.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
          Length = 441

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 36/212 (16%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSS 237
           SRE        M    V   + +TE   G+D+A IT+  +K +DG  Y ++G K W  + 
Sbjct: 140 SRELQEKFLPDMLTAKVRSCIAITEPDAGSDVANITTTAEKSADGKHYIINGEKKWITNG 199

Query: 238 PMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             SD   M  +  G     +   +VP     G P G+  +RL    G     T  +E  N
Sbjct: 200 IWSDYTTMAVRTGGPGPAGLSMIVVPL---KGYP-GVTMRRLPVS-GQVCGGTTYIELDN 254

Query: 294 TFGFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSGMRVSLAEAIHYA 339
                         PVE+        MK ++       L  A+      RV+L+ A+ Y 
Sbjct: 255 V-----------KVPVENLIGQEGHGMKYIMTNFNHERLTIAVGVTRQARVALSAAVEYC 303

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +R   G  L+DQPV++  ++    ++ +  A
Sbjct: 304 MKREAFGKTLMDQPVVRHRLSKAGAELESMWA 335


>gi|209515684|ref|ZP_03264548.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209503920|gb|EEA03912.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 400

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 26/260 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           PM +       GLTE   G+          K +   + L+G K W  +SP  D  I+ A+
Sbjct: 131 PMVRLEKVGCFGLTEPLVGSGAGGGLLTTAKRAGDTWVLNGQKRWIGNSPWCDLSIIWAR 190

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELEFSNT--FGFLLGDL 302
              + +V  F+V    E+ +  G    +++ K+  R   N  + LE         L GD 
Sbjct: 191 DVDDNQVKGFIV----ENKTTPGFSVAKIERKVALRVVQNGVITLENCRVPEENRLQGDS 246

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAI 359
           +       D   ++ L    ++   +  S+     A+ YA+ R   G  +    +++  +
Sbjct: 247 SF-----RDTARVLRLTRQYVAWEAVGCSMGAYEHALKYAQTREQFGKPIASFQLVQDLL 301

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +  +I A+  +  RLA   D+ K + E A+ A       K +C       +  A E +
Sbjct: 302 AKMLGNITASQCMVVRLAQLQDQGKLKDEHASLA-------KAFCTVRMRETVGWAREVL 354

Query: 420 GGSGYIEERSIARHYRESPA 439
           GG+G + + ++AR   +S A
Sbjct: 355 GGNGIVLDYNVARFMADSEA 374


>gi|187919804|ref|YP_001888835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718242|gb|ACD19465.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 380

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 116/247 (46%), Gaps = 28/247 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+++A + ++  +  D  + ++G K W  +   SD  +++  V G  G   +
Sbjct: 125 IGISEPDVGSNVAELRTRAVRDGDH-FIVNGEKTWITNGVYSD--VLICTVRGEKG---L 178

Query: 259 PRLLEDGSPNGLCYQRL-KNKIGNRSNATV-----ELEFSNTFGFLLGDLNVSTGPVEDM 312
             +L D   +G   + + K  +G++S A +      +  +N  G          G    M
Sbjct: 179 SHILIDRKEHGYESRNIDKIALGSQSTAQIFITDARVPATNVIG------EEGEGLRNTM 232

Query: 313 KILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+  +  + +  +SV  MR +L E+I YA+ R   G ++    ++   +A++A+ + A+ 
Sbjct: 233 KVFEHARAHVGTLSVGIMRAALEESIAYAKERKQFGKVIAAHQLIAAKLANMAIMVDASR 292

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  R+    D A  R +      + A + K +  + A  V  +A++  GG+G  +E ++
Sbjct: 293 LMCQRVFGLID-AGVRCD------MQASMAKAFATEAAVKVCRDAVQLHGGNGITKEFNV 345

Query: 431 ARHYRES 437
            R  RE+
Sbjct: 346 ERLLREA 352


>gi|260574065|ref|ZP_05842070.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259023531|gb|EEW26822.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 402

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 28/255 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   T   IG  GLTE   G+D A + +  +K + G Y L+G K W  ++P++D F++ A
Sbjct: 133 PKLATGEWIGCFGLTEPDAGSDPAGMKTVARKTAGG-YVLNGAKMWISNAPIADVFVVWA 191

Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + E   G++  F++     D    GL   ++  K+  R++ T E+   +     +G+  +
Sbjct: 192 KSEAHGGKIRGFVL-----DKGMKGLSAPKIGGKLSLRASITGEIVMKDV---EVGEDAL 243

Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----A 358
             G VE +K     L+ A   ++   +  AE   +A R++       ++P+ +       
Sbjct: 244 LPG-VEGLKGPFGCLNRARYGIAWGVLGAAEFCLHAARQYGLDRKQFNRPLAQTQLYQLK 302

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++  +I+       R+    DEA +  E       M  + K   C  A      A + 
Sbjct: 303 LANMLTEISLGLQACLRVGRLMDEANAAPE-------MISLIKRNNCGKALDAARAARDM 355

Query: 419 IGGSGYIEERSIARH 433
            GG+G  E+  I RH
Sbjct: 356 HGGNGIQEDYQIMRH 370


>gi|220917630|ref|YP_002492934.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955484|gb|ACL65868.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 646

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+D A + +  ++  DG  Y L+G K W  +  +++  +++A+      +  
Sbjct: 170 FALTEANVGSDPARLATTAERSPDGTHYVLNGAKLWCTNGTIAELLVVMARDPRTDAISA 229

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
           F+V    E   P      R +  +G R+ A   L F++     +   N+       +KI 
Sbjct: 230 FVV----ETSWPGVEVTHRCRF-MGLRAIANAALRFTDV---KVPAENLIGKEGRGLKIA 281

Query: 315 LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           L  L++  +S+      G++ +LA +  +A  R   G  +     +   +AD+A    A 
Sbjct: 282 LTTLNTGRLSLPAAVAGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAM 341

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A+S       D A+S ++   Y  R+ A   K W    A  +I E M+  GG GY  ER
Sbjct: 342 EAVS-------DLAQSLADHEGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETER 394

Query: 429 SIA----------RHYRESPANSILLGSGNAMVL 452
           S+A          R  R++  N I  GS   M L
Sbjct: 395 SLAGRGETPVGVERWMRDARINLIFEGSSEIMHL 428


>gi|116694531|ref|YP_728742.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529030|emb|CAJ95377.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 385

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 27/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR----VG 254
           + +TE + G+D+A + ++ +   D  + L+G K ++S+  ++D  +++A+ +      +G
Sbjct: 124 IAMTEPQAGSDLAGMRTRAEDHGD-HWVLNGAKTYISNGQLADYVVVVARTDPERSHGLG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V R    G P G    R   K+G  S  T EL F N     +   NV   P +  + 
Sbjct: 183 LFIVER----GMP-GFERGRKLRKMGLHSQDTSELFFDNV---KVPKANVLGEPGQGFRY 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L        L  A   ++  +V+    + Y + R   G  +      +  +A++   + A
Sbjct: 235 LTRHLAEERLIGACGYMASAQVAFDLTLDYVKERKAFGRAIGTFQNSRFKLAELRAQLDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 +     +      E AA A+++         ++   ++ E ++  GG+GY+EE 
Sbjct: 295 LQTFVDQCVLQHNAGTLTVETAASAKLL-------TSELQGRMVDEGVQLHGGAGYMEEY 347

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I R Y ++  + I  GS   M
Sbjct: 348 RICRMYTDARISRIYAGSSEIM 369


>gi|15607356|ref|NP_214729.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis H37Rv]
 gi|148659979|ref|YP_001281502.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|167968787|ref|ZP_02551064.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|215406208|ref|ZP_03418389.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis 02_1987]
 gi|215448496|ref|ZP_03435248.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T85]
 gi|218755952|ref|ZP_03534748.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|254549154|ref|ZP_05139601.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289552467|ref|ZP_06441677.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 605]
 gi|289760319|ref|ZP_06519697.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T85]
 gi|289764331|ref|ZP_06523709.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|294994689|ref|ZP_06800380.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis 210]
 gi|297632695|ref|ZP_06950475.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 4207]
 gi|297729669|ref|ZP_06958787.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN R506]
 gi|313656995|ref|ZP_07813875.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN V2475]
 gi|1871588|emb|CAB07010.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE3 [Mycobacterium tuberculosis
           H37Rv]
 gi|148504131|gb|ABQ71940.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|289437099|gb|EFD19592.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 605]
 gi|289711837|gb|EFD75853.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|289715883|gb|EFD79895.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T85]
 gi|326905970|gb|EGE52903.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis W-148]
          Length = 357

 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344
            F N       +LG   +  G  + MK L    +  A  ++     +L +++ YA++R  
Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRES 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A       
Sbjct: 276 FGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA------- 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A  +   A+   GG GY  E  + R 
Sbjct: 329 SEVAMEIALNAVRIHGGYGYSTEYDVERR 357


>gi|158521564|ref|YP_001529434.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510390|gb|ABW67357.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 381

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 28/272 (10%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----- 250
           +   + +TE   G+D+AA+T+   +  D +  L+G K F+++ ++   +++A  +     
Sbjct: 119 IITAVAMTEPDAGSDVAAMTTIAVEEGDEV-VLNGSKTFITNGINADLVVVAAKDPAAEN 177

Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
               V  ++V    EDG+P G    R   K+G  S  T EL F+N       LLG+ N+ 
Sbjct: 178 PHQAVSLYIV----EDGTP-GFTRGRHLEKMGFHSQDTAELFFTNCRIPRKNLLGEKNM- 231

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQPVMKRAIADI 362
            G V  M+ L    L  A+M+   + + +   + Y +  +  +G        +   + ++
Sbjct: 232 -GFVMLMEKLQQERLICAVMAQFAVEIMMEAVVGYCKGTKDTTGKPYSKHQAVNFQLVEM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +         +L     E K+   E   A       KYW   +   +  + ++ IG  
Sbjct: 291 MTEAHIGRVFMEKLVADHMEGKNVVRETCMA-------KYWHTDLTQTISNQVLDLIGEE 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              E   I R +R+     I  G+   M L V
Sbjct: 344 ATAERSLILRGWRDLRVLPIFAGTNEIMKLVV 375


>gi|24940605|gb|AAN65232.1|AF329398_22 putative acyl-CoA dehydrogenase [Streptomyces roseochromogenes
           subsp. oscitans]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255
           +TE   G+D++ + +     SD  Y L+G K F+S +P++D FI  A      G      
Sbjct: 122 MTEDDAGSDLSRLATTAVADSDS-YVLNGKKSFVSNAPLADVFITYAATTPSAGYLGMSA 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
           F VPR L      GL       K+G    A  ++EF++      +LLG  N      +  
Sbjct: 181 FAVPRTLP-----GLRINSPLAKMGLNGCAAAQVEFTDCKVPGRYLLGPENQGNSIFQRS 235

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            I        + +  M V LA+ + +A+ RR     I   Q +  R +A + L +  +  
Sbjct: 236 MIWERACLPAIYLGAMEVQLAQCVDHAQSRRQFGRSIGTFQAISHR-LATMKLRLETSRL 294

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R     D+ +S  E  A       + K    + A A   +A++  G  GY+    I 
Sbjct: 295 LLYRACWYLDQGRSAVEAVA-------LAKTAVAEAAVANALDAVQVFGARGYLAADGIG 347

Query: 432 RHYRESPANSILLGS 446
           +  + +   +I  G+
Sbjct: 348 QQLQNAIPLNIFSGT 362


>gi|120555311|ref|YP_959662.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325160|gb|ABM19475.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 379

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 15/266 (5%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV 249
           M    +   + +TE   G+D+  + +   +  D  Y L+G K F+++  ++D  I++A+ 
Sbjct: 115 MASGEMITAIAMTEPGAGSDLQGVKTTAIRQGDH-YILNGSKTFITNGQLADLVIVVAKT 173

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
           + + G      LL + +  G    +  NK+G ++  T EL F +       LLG +    
Sbjct: 174 DPKEGAKGTSLLLVETAWEGFEKGQNLNKVGMKAQDTSELFFQDVKVPADNLLGSME-GQ 232

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + M+ L    L  A+ +V+    +    + Y + R   G  +I     +  +A++  
Sbjct: 233 GFFQLMQELPAERLQVALTAVAAAEAAWQWTLDYVKERKAFGKPVIAFQNTRFKLAELKA 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA   + R      + K     AA   ++   T    CK    V+ E ++  GG GY
Sbjct: 293 EITAARVFTDRCLELHLDKKLDIPTAA---MLKQHTTDLQCK----VMDECVQLHGGYGY 345

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           + E  IAR + +S    I  G+   M
Sbjct: 346 MWEYPIARAWADSRVQRIYAGTNEIM 371


>gi|325528590|gb|EGD05688.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 384

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 21/247 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP  +      + ++E   G+D +A+T+   +  D  + L+G K W   +  +D  I++A
Sbjct: 119 APYARGITRAAMAISEPGAGSDPSAMTTTAARDGDA-WVLNGRKIWISHARDADWTIVMA 177

Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLG 300
             +      G +  F+V R        G   +R    IG  S   + L+        LLG
Sbjct: 178 LTDRSKGKRGGISAFIVER-----DTPGFVVERRIPMIGGLSTYEIVLQDCRIPAAQLLG 232

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  P++       L  A   +     ++A    YA++R   G  L ++  ++  +A
Sbjct: 233 REGDGFAPMQARLANRRLQMAAWCIGRAGRAVALLCDYAKQRKTFGVPLAERQAVQWWVA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D    I A   ++        EA +R +    AR    + K +  +MA +VI  AM+ +G
Sbjct: 293 DALTQIHACRLMTL-------EAAARVDAGQDARTQISMVKVFATEMASSVIDHAMQTLG 345

Query: 421 GSGYIEE 427
             G  +E
Sbjct: 346 AMGMTKE 352


>gi|170062284|ref|XP_001866601.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880243|gb|EDS43626.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 621

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 124/313 (39%), Gaps = 38/313 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           P   T    G   LTE   G+D A++ S+      G  Y L+G K W     ++D F   
Sbjct: 170 PQLATGKVFGAFALTEPSVGSDAASVKSRAVLSPCGKYYILNGSKIWCSGGGIADIFTTF 229

Query: 247 AQVE----------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VEL 289
           AQ E           ++  F+V R  E     G+     ++K+G + + T       V++
Sbjct: 230 AQTEVVDPKTGEKKDKMTAFIVERGFE-----GVTTGPPESKMGLKCSVTTDVYYDDVKV 284

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
              N  G +     V+   +   +  +      M    MR  + +A  +   R      L
Sbjct: 285 PVENVLGEVGNGFKVAVNILNSGRFGL----TAMLTGTMRTCIQKAAEHVTTRVQFKRKL 340

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMA 408
            D   ++  +A +A+    A  L++ +A + D+       EAA  +I      ++ C   
Sbjct: 341 KDFENVQEKLAKMAMHHYVAQTLTYMVAGNMDKGSMDYHLEAAITKIFGTEAGWYVCD-- 398

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQ 467
                EA++ +GG+GY++   + +  R+     I  G+ + + L + L  ++   N  + 
Sbjct: 399 -----EAIQLLGGNGYMKATGLEQFLRDMRVFRIFEGANDVLRLFIALTGIQYAGNQLKG 453

Query: 468 LFSTLEQDLGSSG 480
           L   L+  L + G
Sbjct: 454 LQKALKNPLSNMG 466


>gi|113671417|ref|NP_001038772.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Danio rerio]
 gi|108742117|gb|AAI17590.1| Zgc:136367 [Danio rerio]
 gi|182891452|gb|AAI64553.1| Zgc:136367 protein [Danio rerio]
          Length = 630

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I  +     DG  Y L+G K W  +   +D   + A+ E         
Sbjct: 190 LTEPGSGSDAASIQLRATLTEDGKHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKK 249

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R        G+   + ++K+G R + T E+ F +T      ++G+  V  G
Sbjct: 250 DKITAFIVERAF-----GGVTSGKPEDKLGIRGSNTTEITFEDTKVPIENVIGE--VGDG 302

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362
               M IL   ++   S+ G    + + +      YA  R      L +  +++   A +
Sbjct: 303 FKVAMNIL---NNGRFSMGGAGAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATM 359

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           AL++    ++++  A   D       S EAA  ++ +     W C      ++EA++ +G
Sbjct: 360 ALNVYVMESMAYLTAGMMDRPGLPDCSLEAAMVKVFSS-EGTWIC------VSEALQVLG 412

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G+ +     R+ R+     I  G+
Sbjct: 413 GLGFTKNYPYERYLRDCRILQIFEGT 438


>gi|302549857|ref|ZP_07302199.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467475|gb|EFL30568.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 408

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRASWMAVN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKKVTAQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGS 446
             G+
Sbjct: 387 FEGT 390


>gi|119471713|ref|XP_001258212.1| acyl-CoA dehydrogenase family protein [Neosartorya fischeri NRRL
           181]
 gi|119406364|gb|EAW16315.1| acyl-CoA dehydrogenase family protein [Neosartorya fischeri NRRL
           181]
          Length = 512

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 36/265 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 245 LAITEAFAGSDVAGLKTTAKKTPDGKHYIVNGTKKWITNGMFADYFVTGCRTEKGFSVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR        G+  +++K      + AT  ++F N        + V     E+ K  I 
Sbjct: 305 IPR------GEGVETKQIKTSYST-AAATAFVQFENV------KVPVENLLGEEHKGFIV 351

Query: 318 LDSAI------MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL--- 364
           + S        M  + +R+ +    E + +  +R V G  LI+QPVM++ +A  I+L   
Sbjct: 352 IMSNFNHERFTMVCAVIRMCMTVTEECMKWCNQRIVFGKKLIEQPVMRQKLARMISLCES 411

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + A   ++++++ N      + +++AA+      + K    + A  +   A    GG G 
Sbjct: 412 NQAWLESIAYQMCNM-----TYAQQAAHLGGPIGLLKSHSTRCAQEIADHATNIFGGRGI 466

Query: 425 IEE---RSIARHYRESPANSILLGS 446
            +    + I   +R    ++IL G+
Sbjct: 467 TQSGMGKVIEMFHRTYKFDAILGGT 491


>gi|330878798|gb|EGH12947.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 383

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP      +P G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVP----TDNP-GFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      K    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGKPCLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|290962177|ref|YP_003493359.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651703|emb|CBG74828.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 408

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   + AA  L +R   S+  
Sbjct: 273 MAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRTSVDAARLLVWRA--SWMA 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R   AA        +K +  + A  V A+A++ +GG+GY  E  + R +R+S   +I
Sbjct: 331 INGRPFTAAEGSQ----SKLFASETAKKVTAQALQILGGNGYTREYPVERMHRDSAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|73537335|ref|YP_297702.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72120672|gb|AAZ62858.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 385

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 27/262 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR----VG 254
           + +TE + G+D+A I ++ +   D  + L+G K ++S+  ++D  +++A+ +      +G
Sbjct: 124 IAMTEPQTGSDLAGIRTRAEDKGDH-WLLNGAKTYISNGQLADYVVVVARTDPERSHGLG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V R +      G    R   K+G  S  T EL F N     +   NV   P +  + 
Sbjct: 183 LFIVERDMP-----GFQRGRKLRKMGLHSQDTSELFFDNV---RVPKSNVLGEPGQGFRY 234

Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           L        L  A   ++  +V+    + Y + R   G  +      +  +A++   + A
Sbjct: 235 LTRHLAEERLIGACGYMASAQVAFDITLDYVKERKAFGRAIGTFQDSRFRLAELRAQLDA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 +     +      E AA A+++         ++   V+ E ++  GG+GY+EE 
Sbjct: 295 LQTFVDQCVLQHNAGTLTVETAASAKLL-------TSELQGRVVDEGVQFHGGAGYMEEY 347

Query: 429 SIARHYRESPANSILLGSGNAM 450
            I R Y ++  + I  GS   M
Sbjct: 348 RICRMYTDARISRIYAGSSEIM 369


>gi|325282594|ref|YP_004255135.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324314403|gb|ADY25518.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 389

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 22/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVG 254
            GLTE+ GG+D  A+ ++ ++  D  + L G K W  +SP++D  ++ A+V    E  V 
Sbjct: 130 FGLTEESGGSDPGAMRTRARRDGDD-WVLDGTKMWITNSPLADLALVWARVEEGGEDTVR 188

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F+VP         G     ++ K+  R++ T E+   +     G +L  +    GP+  
Sbjct: 189 GFIVPT-----DTPGYSAPIIRRKMSMRASVTGEIVLDSCRVPAGAMLPGVRGLKGPLSC 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +    +      ++  + + L  A+ Y   R   G     + +++  +  +A D +A   
Sbjct: 244 LTGARF-GIGWGAMGALELMLTTALDYTGSRVTFGQPTASRQLVQDKLVKMATDHSAGLL 302

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++RL    D       +  YA++   + K    + A      A E +GG+G   E  + 
Sbjct: 303 LAWRLGVLKDAG-----QMDYAQV--SVVKRNNVRRALEGARLARELLGGNGITTEYPVI 355

Query: 432 RH 433
           RH
Sbjct: 356 RH 357


>gi|306843620|ref|ZP_07476221.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306276311|gb|EFM58011.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 392

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 45/294 (15%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERKQ-----FDQPIGEFQLMQGKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEIGAGT 375


>gi|158520836|ref|YP_001528706.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509662|gb|ABW66629.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 411

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 25/240 (10%)

Query: 223 DGIYCLSGH--KWFLSSPMSDAFIMLAQVE---GRVGC--FLVPRLLEDGSPNGLCYQRL 275
           DG Y ++G    W  ++PM+    +L  ++   G  GC   +VP  L      G+     
Sbjct: 175 DG-YVINGEITAWIANAPMATHAAVLVSLDPSRGIPGCGVAIVPLDLP-----GITVSNP 228

Query: 276 KNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333
            ++IG R+     + F +    F L  ++        M  ++   + I++ + + ++ A 
Sbjct: 229 LDRIGQRTLPRSRISFKDVKIPFTLMAVSDMEKARPQMTGMLARTNNIIAAASVGLAQAA 288

Query: 334 --EAIHYARRRHVSGGILI-DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
             EAIHYA++R V GG+ I     +K  + ++   +  A A S R+ N    A+S S   
Sbjct: 289 YDEAIHYAKQR-VQGGVPIFTHKNIKLQLFNMFTKVETARAYSRRVGNYNRTAESASLHH 347

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C + A  V ++A+   GG+G   E  + + +R++    +  G  N +
Sbjct: 348 SLA------AKVFCTRTAFDVASDAIAIFGGNGLTREYPVEKMFRDARVAMLSDGENNTL 401


>gi|254292625|ref|YP_003058648.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041156|gb|ACT57951.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 576

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 49/327 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + + PKI S E  PT          A+    TE   G
Sbjct: 263 GSLGTRSEIAAELILNGGTQAQKEAFLPKIASGEILPT----------AV---FTEPNTG 309

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLV--P 259
           +D+ A+ ++   ++   + ++G+K W   +  SD   ++A+ +        +  FL   P
Sbjct: 310 SDLGALRTRA-TLNGEYWNITGNKTWITHASRSDLMTVMARTKPDTTDFRGLSMFLAEKP 368

Query: 260 RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           R  ED +P   +G+    ++  +G R     EL F    GF +   N+  G   D     
Sbjct: 369 RGSED-TPFPADGMTGGEIE-VLGYRGMKEYELGFD---GFEVPKENLLGGEAGDGMGFK 423

Query: 317 YL---------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           YL          +A  ++   + +L   + YA  R   GG + + P ++  +  +A ++ 
Sbjct: 424 YLMATFEGARIQTAARAIGTAQAALELGLQYALDRQQFGGPIFNFPRVQDKLVMMAAELV 483

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L++  A   D  K    EA  A+++         ++A A    A++  GG+G+  E
Sbjct: 484 GVRQLTYYSAKQKDSGKRCDLEAGMAKLIG-------ARVAWAAADNALQIHGGNGFALE 536

Query: 428 RSIARHYRESPANSILLGSG--NAMVL 452
            +I+R   ++   +I  G+G   AMV+
Sbjct: 537 YAISRVLCDARILNIFEGAGEVQAMVI 563


>gi|167818941|ref|ZP_02450621.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167827317|ref|ZP_02458788.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167897402|ref|ZP_02484804.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167914064|ref|ZP_02501155.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|217425455|ref|ZP_03456948.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226195174|ref|ZP_03790765.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237508663|ref|ZP_04521378.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254187439|ref|ZP_04893952.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254198650|ref|ZP_04905070.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|157935120|gb|EDO90790.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169655389|gb|EDS88082.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|217391418|gb|EEC31447.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225932979|gb|EEH28975.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|235000868|gb|EEP50292.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP         G    + + K+G R++ T  +   N     +   N+     E +KI 
Sbjct: 184 FVVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TRINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLADYEVERHYRDARITQIYEGT 365


>gi|315024180|gb|ADT71661.1| putative acyl-CoA dehydrogenase [Mycobacterium chubuense NBB4]
          Length = 392

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D  ++ ++     D  + L+G K W  +   S  + ++A  E   G   +  
Sbjct: 137 LSEREAGSDAGSMRTRAWLKGDE-WVLNGAKCWISNGGHSTWYTVMAVTEPDKGANGISA 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F N    + GD  +          L  LD 
Sbjct: 196 FVVHKDDPGFVVGAKERKMGIKGSPTTELYFENC--RIPGDRIIGDPGTGFKTALATLDH 253

Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+      I Y + R   G  + D   ++  +AD+A+ + AA  + + 
Sbjct: 254 TRPTIGAQAVGIAQGALDATIAYVKERKQFGKAIADFQAVQFMLADMAMKLEAARLMVYT 313

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A     A++   E     I +  +K +   +A  V   A++  GG GY  +  + R  R
Sbjct: 314 AA-----ARAERGEPNLGFI-SSASKCFASDVAMDVTTNAVQLFGGYGYTRDFPVERFMR 367

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 368 DAKITQIYEGT 378


>gi|262201483|ref|YP_003272691.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084830|gb|ACY20798.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 397

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 27/276 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQ 248
           M    V     ++E   G+D+AAIT+  ++  D  Y ++G K +L++  S   +  ++  
Sbjct: 118 MATGEVRGAFSMSEPDLGSDVAAITTTARRAGDD-YVINGQKMWLTNGGSSTLVAALVRT 176

Query: 249 VEG------RVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            EG       +  FL+ +    G    GL       K+G +   T EL F +       D
Sbjct: 177 DEGADKPHHNLTTFLIEKPAGFGEVLPGLTIPGKIPKMGYKGIDTTELIFDDHH--TRAD 234

Query: 302 LNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
             +   P      ++  ++   ++VS     +A+     A+ YA++R   G  + +   +
Sbjct: 235 TILGGTPGRGFAHMMDGVEVGRVNVSARACGVAQRAFELAVAYAQQRRTFGKPIAEHQAV 294

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             ++A++A  + A   +    A   D  +          + A + KY C +    V   +
Sbjct: 295 AFSLAEMATKVEAGHLMMVNAARLKDTGERND-------VAAGMAKYLCSEYCAEVTQAS 347

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               GG GY  E  I R  RE+P   +L+G G + +
Sbjct: 348 FRIHGGYGYSTEYEIERLMREAP--FLLIGEGTSEI 381


>gi|221070152|ref|ZP_03546257.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220715175|gb|EED70543.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 737

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 21/135 (15%)

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
           TSA+M+    T  +H   A K F   + P     + +  ++I LG +E   G+D+A I +
Sbjct: 442 TSANMIG--PTLVIHGSDAQKAF---FLPG----IARGDISIALGYSEPDHGSDLAGIRT 492

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-------QVEGRVGCFLVPRLLEDGSPNG 269
             ++  DG + ++G K F S+     ++ LA       Q  G +  FLVP         G
Sbjct: 493 SAKRTEDGGWVVNGQKIFTSTAGFSQYVWLAARTDPANQRHGGISVFLVPL-----DTPG 547

Query: 270 LCYQRLKNKIGNRSN 284
           +  Q +    G+R+N
Sbjct: 548 ITIQPMSGLNGHRAN 562


>gi|298242553|ref|ZP_06966360.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555607|gb|EFH89471.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 393

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255
           L LTE   G+D+A + +   ++    + + GHK ++++   +D  I  A ++   GR G 
Sbjct: 127 LALTEPGIGSDVAGMATTA-RLEGEEWVIDGHKHYITNGARADLIITFATIDKSMGRAGI 185

Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P GL   R++ K+G R++ T EL F N
Sbjct: 186 RPFVVPK----GTP-GLVIGRIEEKMGLRASQTTELIFEN 220


>gi|227819395|ref|YP_002823366.1| isovaleryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227338394|gb|ACP22613.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium fredii
           NGR234]
          Length = 387

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 18/254 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 128 LAMSEPGAGSDVVSMKLKADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDPAAGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L + +  G    +  +K+G R + T EL F++     +   NV     E +++L+  
Sbjct: 187 TAFLVEKTFPGFSTGQKLDKLGMRGSNTCELIFTDC---KVPQENVLGKVGEGVRVLMSG 243

Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   + +S      M   L   + Y   R   G  + +  +M+  +AD+ + +  A A 
Sbjct: 244 LDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQGKLADMYVTMNTARAY 303

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GY  +    R
Sbjct: 304 VYAVAAACDRGETARKDAAGCIL-------YAAEKATMMALEAIQALGGNGYTNDYPAGR 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 LLRDAKLYEIGAGT 370


>gi|262194426|ref|YP_003265635.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262077773|gb|ACY13742.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 411

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 113/278 (40%), Gaps = 28/278 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D   + ++ ++  D  Y L G K W     ++D F++ A+ + R   F V
Sbjct: 122 FALSEPEIGSDAGGVQTRARRDGD-TYVLDGCKMWITYGQLADLFLVFARCDDRPTAFFV 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316
            R        GL  + +    G R++ T  L FS     +  D  V  GP+     LI  
Sbjct: 181 DR-----RTPGLSIEPVHGMFGLRASMTARLSFSGC--RIPSDQQV--GPMGGGVSLIAS 231

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAAT 370
             LD    SV+   + LA+A   A   H S     G ++ +  +++R I ++   + +A 
Sbjct: 232 YALDFGRFSVAWGSLGLAQACLDASILHTSERTQFGKLIKEHQLVRRLITEMMTRVESA- 290

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL +  + A+ R  E   A     + KY     A     +A++  G  G      +
Sbjct: 291 ----RL-HCAEAARLRDAEDMNAAAATAMAKYVASTAATQCALDAIQLHGAHGCGPYTPL 345

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
            R+  ++    I+ GS     +  + L E G   + QL
Sbjct: 346 QRYLGDAKVGEIIEGSNE---IQQITLAEYGYQRYRQL 380


>gi|183980720|ref|YP_001849011.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183174046|gb|ACC39156.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 382

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 64/309 (20%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           +TT    + W P + + +               +G+ +TE   G+D+A I +    + DG
Sbjct: 105 LTTLEQQQRWLPGVVTGD-------------TVLGIAMTEPGAGSDLAGIHTTA--VRDG 149

Query: 225 I-YCLSGHKWFLSSPMS-DAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y ++G K F+S+  S D F++  +   E   G  L   L+ D +  G    R   KIG
Sbjct: 150 SHYVVNGAKTFISNGQSGDLFVIAVRTSPERHQGLSL---LVVDATTPGFHRGRSLEKIG 206

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVS 331
             +  T EL F+        D+ V   PVE++         +++  L    ++++   V+
Sbjct: 207 LHAQDTSELSFT--------DMRV---PVENLLQNEGMGFYQLMRNLPQERLALAVGAVA 255

Query: 332 -----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFD 381
                LAE + Y R+R   G  +      +  +A++A +I  A       L+  LA    
Sbjct: 256 AAEGILAETLDYVRQRKAFGSPIASFQHSQFLLAELATEIDIARTYLDDCLAQHLAGELT 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A++       AR+     K+W  ++        ++  GG GY+ E  +++ + ++   +
Sbjct: 316 AARA-------ARL-----KWWTTELQVRTADRCLQLHGGYGYMREYRVSQAFVDARIQT 363

Query: 442 ILLGSGNAM 450
           I  G+   M
Sbjct: 364 IYGGTNEIM 372


>gi|149410675|ref|XP_001506493.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 476

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 23/265 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+A + ++ +K  D  Y ++G K W  +   ++ + +LA+     +      
Sbjct: 203 VTEPGAGSDVAGLKTKAEKKGD-EYVINGQKMWITNGGKANWYFLLARSNPDPKAPASKA 261

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   R +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 262 FTGFIVEADTP-GIQIGRKELNMGQRCSDTRGIVFEDV---RVPKENVLIGEGAGFKIAM 317

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D     V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 318 GAFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGRLLVEHQAVSFLLAEMAMKVELAR 377

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  + ++A++  GG+G+  +  +
Sbjct: 378 LSYQRAAWEVDSGRRNT-------YYASIAKAFAGDIANQLASDAVQIFGGNGFNSDYPV 430

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
            +  R++    +L G        +L
Sbjct: 431 EKLMRDAKIYQLLEGRAQVTFQKLL 455


>gi|300711382|ref|YP_003737196.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125065|gb|ADJ15404.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 381

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 108/266 (40%), Gaps = 41/266 (15%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS----DAFIM 245
           P+       GL ++E   G+D+A +T+  +K  D  Y ++G K+++ + +       F+ 
Sbjct: 116 PVAAGEQITGLAVSEPDTGSDLAGMTTTAEKDGDE-YVINGEKYWIGNGVEADWVTVFVR 174

Query: 246 LAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTF 295
            ++   R       +VP         G   + +  K+G R++    + F        N  
Sbjct: 175 TSEENDRYSNHSMIIVPT-----DAAGYEAEHIPEKMGMRASKQAHITFEDVRVPEENLV 229

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILI 350
           GF  G           + +  + +   + V G  + +A A       +   R   G  + 
Sbjct: 230 GFENGGF---------LMLAEFFNHGRIVVGGHGLGMAAAAIEEAWEFVHDREAFGRGVN 280

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  +AD+ L+  AA AL++R A    + ++    AA A+  +  T   C +    
Sbjct: 281 EFQAVQHGLADMRLEFEAARALNYRAAKKVRDGENAGLWAAMAKTKSTETATMCAE---- 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRE 436
              + M+  GG   + +R IAR YR+
Sbjct: 337 ---QGMQFHGGRSILTDRRIARVYRD 359


>gi|237743848|ref|ZP_04574329.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|229432879|gb|EEO43091.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
          Length = 378

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 33/289 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM 239
           +   K  M    +A GLG   LTE   G+D +A   +   + DG  Y L+G K F+++  
Sbjct: 102 NEEQKQRMCDLVLAGGLGAFCLTEPGAGSDASA--GRTTAVKDGNEYVLNGRKCFITNGA 159

Query: 240 SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
             +F  +  + +   G   +     +    GL     ++K+G R+        SNT   +
Sbjct: 160 VASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVV 211

Query: 299 LGDLNVSTGPV-----EDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347
           L D  +    +     E   I +  LD A   +  + V +A     EAI Y + R   G 
Sbjct: 212 LEDCRIPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGK 271

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I    ++  IAD+ +    A  +        D      +E+A       I K +   +
Sbjct: 272 PIIKNQALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDI 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A  V +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 325 AMQVSSEAIQMFGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|52081769|ref|YP_080560.1| Acyl-CoA dehydrogenase YusJ [Bacillus licheniformis ATCC 14580]
 gi|52787155|ref|YP_092984.1| YusJ [Bacillus licheniformis ATCC 14580]
 gi|319647685|ref|ZP_08001903.1| YusJ protein [Bacillus sp. BT1B_CT2]
 gi|52004980|gb|AAU24922.1| Acyl-CoA dehydrogenase YusJ [Bacillus licheniformis ATCC 14580]
 gi|52349657|gb|AAU42291.1| YusJ [Bacillus licheniformis ATCC 14580]
 gi|317390026|gb|EFV70835.1| YusJ protein [Bacillus sp. BT1B_CT2]
          Length = 594

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 49/313 (15%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D FI+ A+++G     F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKIDGEHFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
            +       +G+     + K+G + ++T       V++   N    LLG+     G V  
Sbjct: 210 EK-----DYSGVSTGPEEKKMGIKGSSTRTLILDQVQVPKEN----LLGE--PGKGHVIA 258

Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             IL       A+ ++   +  +  +  YA +R      +    ++   IA++++ + A 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISKFSLIGEKIANMSVKLYAM 318

Query: 370 TALSFRLANSF-DEAKSRSEE------------AAYARIMAPITKYWCCKMAPAVIAEAM 416
            +  +R    F D+  + SEE            A YA I   + K +  +    ++ E +
Sbjct: 319 ESSVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYA-IECSLNKVFGSETLDYIVDEGV 377

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464
           +  GG G+++E  + R YR+S  N I  G+     L V            L L EK   L
Sbjct: 378 QIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKAL 437

Query: 465 FEQLFSTLEQDLG 477
            E+L   + ++ G
Sbjct: 438 QEELMMLMPEEPG 450


>gi|85705824|ref|ZP_01036921.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85669814|gb|EAQ24678.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 394

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 58/267 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   GTD  A+ +  ++  D  Y ++G K W      SD  ++LA+          
Sbjct: 123 FGVTEPTSGTDTLALKTTARRDGDE-YVINGQKIWTSRVEHSDLMVLLART--------T 173

Query: 259 PRLLEDGSPNGLCY--QRLKNKIGNR----------SNATVELEFSN------------- 293
           PR       +GL      L+ K+G+           ++AT E+ F N             
Sbjct: 174 PREEAKSKTDGLSVFLIDLRGKVGHGIDIRPIRTMINHATTEVFFDNLRIPADSLIGEEG 233

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILID 351
             F ++L  +N         +ILI    A   +   +  L     YAR R V G  I ++
Sbjct: 234 KGFRYILSGMNSE-------RILI----AAECIGDAKWFLKTGSDYARERVVFGAPIGVN 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           Q V +  +A     + AA A+ +R A  +D   +   EA  A+++A    +         
Sbjct: 283 QGV-QFPLARAQAHLMAAEAIVYRAAAMYDAGHNPGVEANTAKLLASEASWEA------- 334

Query: 412 IAEA-MECIGGSGYIEERSIARHYRES 437
            AEA M+  GG  + EE  + R +RE+
Sbjct: 335 -AEACMQTHGGFAFAEEYDVERKFREA 360


>gi|312211965|emb|CBX92049.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 452

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 38/276 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR---- 252
           I L +TE   G+D+  I +  +K  DG  Y ++G K ++++ M   + M A   G     
Sbjct: 171 ICLAVTEPDAGSDVRNIKTTAEKTPDGKHYIINGEKKWITNGMFSDYFMTAVRTGPPNSG 230

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
              +   L+PR        GL  ++L + I    +AT  + F +      +L+G      
Sbjct: 231 AAGISMILIPRA------EGLRTRKL-DVIAGPLSATTYVTFEDVKVPAEYLIG--KEGE 281

Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + M    +  L  A  ++ G R+++ +A  +A +R      LI+QPV++    ++  
Sbjct: 282 GFKQTMVNFNHERLWIAFQAIRGCRIAIQDAFAWAIKREAFDKTLIEQPVVRNKFGNMGR 341

Query: 365 DIAAATALS----FRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            I +  + +    + L N  D   +R      A  ++ + I     CK    V  E ++ 
Sbjct: 342 MIESLQSWTEQIIYELENLSDADGARLLGGTTALLKVESGI----VCKY---VAEECLKI 394

Query: 419 IGGSGYIEERSIAR---HYRESPANSILLGSGNAMV 451
           +GG G  +    AR    YR  P+  +  GS + ++
Sbjct: 395 MGGLGLTKTGQGARIESFYRAVPSFVVPGGSEDVLI 430


>gi|289467871|gb|ADC95620.1| isovalery-CoA dehydrogenase [Brucella melitensis bv. 1 str. M5]
          Length = 382

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERKQ-----FDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|256027536|ref|ZP_05441370.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           D11]
 gi|260495248|ref|ZP_05815376.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289765495|ref|ZP_06524873.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|260197305|gb|EEW94824.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289717050|gb|EFD81062.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 378

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 33/289 (11%)

Query: 184 DPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM 239
           +   K  M    +A GLG   LTE   G+D +A   +   + DG  Y L+G K F+++  
Sbjct: 102 NEEQKQRMCDLVLAGGLGAFCLTEPGAGSDASA--GRTTAVKDGNEYVLNGRKCFITNGA 159

Query: 240 SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
             +F  +  + +   G   +     +    GL     ++K+G R+        SNT   +
Sbjct: 160 VASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVV 211

Query: 299 LGDLNVSTGPV-----EDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347
           L D  +    +     E   I +  LD A   +  + V +A     EAI Y + R   G 
Sbjct: 212 LEDCRIPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGK 271

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I    ++  IAD+ +    A  +        D      +E+A       I K +   +
Sbjct: 272 PIIKNQALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDI 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A  V +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 325 AMQVSSEAIQMFGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|262203342|ref|YP_003274550.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086689|gb|ACY22657.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 407

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVG---- 254
           + +TE   G+D AA+T+      D  Y ++G K F+++      I++ A V+  +G    
Sbjct: 137 MAITEPSFGSDSAAVTTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATVDKNLGRAAI 195

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VPR        G+   RL++K+G R + T  + F N     +   N+   P  D K
Sbjct: 196 KSFVVPR-----EHPGVEVVRLEHKLGIRVSDTAVIRFENC---RIPKENLLGSPEVDTK 247

Query: 314 -----ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIADIAL- 364
                ++   D+    V+GM V +A  A+   RR     GI I  D+P   +  A     
Sbjct: 248 KGFGGVMQTFDNTRPLVAGMAVGVARAALEELRRILEEAGIEIDYDRPAADQHAAAAEFI 307

Query: 365 ----DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               D  AA  L+ R     D  +  S EA+ A+  A        +    V  + +E  G
Sbjct: 308 RMESDFEAAYLLTMRACWMADNKQPNSLEASMAKAKA-------GRTGTDVTNKTVELTG 360

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R+S    I  G+
Sbjct: 361 TLGYSERLLVEKWARDSKILDIFEGT 386


>gi|163842298|ref|YP_001626702.1| isovaleryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|163673021|gb|ABY37132.1| isovaleryl-CoA dehydrogenase [Brucella suis ATCC 23445]
          Length = 392

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  +++  L    + +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVV--LPGGPLGI--MAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERKQ-----FDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAEKATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|325961970|ref|YP_004239876.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468057|gb|ADX71742.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 394

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 56/292 (19%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKIS 222
           L+ +P   + W P +              KT   +G   LTE   G+DIA   +   ++ 
Sbjct: 113 LLGSPEQKRRWLPGL--------------KTFTRLGAFALTEPEHGSDIAGGLATSARLD 158

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            G + L+G K W  +  ++D  ++ A+ E   ++  F+V    E   P G    ++ NKI
Sbjct: 159 GGEWVLNGSKRWIGAGTIADFALVWARDEADLQIKAFIV----ETDRP-GYAAAKINNKI 213

Query: 280 GNR--SNATVELE---------FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G R   NA + L+              GF       +   + D +  +   +A + ++  
Sbjct: 214 GLRIMQNADITLQDVRIPAANLLPGATGF-----GRANELLRDSRAWVGWQAAGIQLAAF 268

Query: 329 RVSLAEAIHYARR---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            V  A A    RR   R ++G  L+ Q      +ADI  +  A+ AL  +LA   ++ K 
Sbjct: 269 DV--ARAYSLGRRQFGRELAGFQLVQQQ-----LADILGNATASLALMVQLARVQEQGKL 321

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              +AA A+           ++A A +A     +GG+G   +  +A+ + ++
Sbjct: 322 EMVQAAMAKAT-------TTRLARASVAMGRSLLGGNGISADYEMAKLFGDA 366


>gi|320011622|gb|ADW06472.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 409

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 17/227 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D A + ++ ++  DG  + L+G K W  
Sbjct: 127 FGSEEQKERWLPGMAAGETIGCFGLTEPDHGSDPAGMRTRAER--DGTDWVLTGRKMWIT 184

Query: 236 SSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           +  ++   ++ AQ +   G      F+VP      SP G     +++K   R++ T EL 
Sbjct: 185 NGSVAGVAVVWAQTDEEGGGSGIRGFVVP----TDSP-GFSAPEIRHKWSLRASVTSELV 239

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGI 348
                      L  +TG    +  L +    I+  ++   R S   A+ YA+ R   G  
Sbjct: 240 LDGVRLPADAVLPGATGLRGPLSCLSHARYGIVWGAMGAARASFEAALDYAKSREQFGRP 299

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +    + +  +AD+AL++     L+  L    D  + R E+ ++ ++
Sbjct: 300 IGGFQLTQAKLADMALELHKGILLAHHLGRRMDAGRIRPEQVSFGKL 346


>gi|288932047|ref|YP_003436107.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894295|gb|ADC65832.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 421

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 120/312 (38%), Gaps = 59/312 (18%)

Query: 162 VALMTTPRVHKDW--APKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           VAL     ++  W  A +IF +E       P + K +   G+  TE +GG+D+A I ++ 
Sbjct: 97  VALAVYALLNNGWPFALEIFGKEEVCQEIIPEVAKGNAFFGIASTEPQGGSDVAGIKTRA 156

Query: 219 QKISDGIYCLSGHK-----------------WFLSSPMS-------DAFIMLAQVEGRVG 254
           +K  D +Y  +G K                 WFL +           AF  + +  G++ 
Sbjct: 157 EKKGD-VYVFNGEKAYISGVGEVQKLPWGGGWFLIARTGGEGHRGLSAFAFIVRKNGKLK 215

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +P + ED   +GL         G       ELE      +LLG+ N     V +   
Sbjct: 216 EGWIPTIYEDIGRHGLT-------TGGFILENFELEKD----YLLGEENKGFYHVMEGFN 264

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILIDQPVMKRAIADIALDIAAATAL 372
           L  +  A  ++   R  L +A+ + R+R + GG  I   Q V  +  AD+     A+   
Sbjct: 265 LARIVVAAATIGAARWLLEKAVEWFRQRKLFGGRSIASFQGVSFK-FADLYARWEASRYF 323

Query: 373 SFRLANSFDE----------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +R A   D+           K  +   A A+   P T   C  +A     E M+  G  
Sbjct: 324 VYRAARLADKIYIEKDPNFNPKDLNVPVALAKNYGPET---CVDLA----EEVMKWYGAY 376

Query: 423 GYIEERSIARHY 434
            Y +E  I R +
Sbjct: 377 AYTKEAPIFRAW 388


>gi|146338523|ref|YP_001203571.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191329|emb|CAL75334.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 54/265 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
            G+TE   GTD  ++ +  ++  D  Y ++G K W   +  SD  I+LA      QV+ R
Sbjct: 123 FGVTEPTSGTDTTSLKTVAKRDGDS-YVVNGQKIWTSRAEYSDLMILLARTTPKDQVQKR 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  F+V   + +   +GL  + ++  +   ++AT E+ F++               F
Sbjct: 182 TEGLSVFIVD--MREAKKSGLTIRPIRTMM---NHATTEVFFTDMRVPAENLIGEEGKGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   V   +  +A+A  YA+ R V G  +     +
Sbjct: 237 RYILSGMNAE-------RILI----AAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +       ++       EA  A+++A          A A    A
Sbjct: 286 QFPIAKSYASMRAAELMVKEATRKYEAGLDCGAEANMAKMLA----------ADASFEAA 335

Query: 416 MECI---GGSGYIEERSIARHYRES 437
             CI   GG G+ EE  + R +RE+
Sbjct: 336 NACIQTHGGFGFAEEYDVERKFRET 360


>gi|146304835|ref|YP_001192151.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145703085|gb|ABP96227.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 378

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 16/264 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL-VP 259
           LTE   G+D+ A+ +   K+      ++G K F S +  S   ++LA+  G  G    + 
Sbjct: 122 LTEPGAGSDLGALQTTA-KLEGNELVINGEKIFTSGASFSTKMVVLARTSGNPGDRQGIS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKIL 315
            LL D    G+   +L + +G R      ++F+N        +  + +   G ++ + ++
Sbjct: 181 MLLVDTKTPGIEVHKL-DLMGIRGAGVSYVKFNNARVPKDSIIGKEGDAFRGAIKAL-MV 238

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A ++V   R +L +A++ A  R   G  L++Q  +   +AD  + + A+  L+ R
Sbjct: 239 SRNGYAGIAVGIARGALEDAVNRAASRKQFGKSLLEQEWISFNLADALVKVEASRLLTMR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D+      EA+ A+ MA IT       A  V   A+   GG G      + R YR
Sbjct: 299 AAYMLDKGIEALTEASMAKYMAAIT-------AAEVSRTALHIFGGHGLNRGSKVERLYR 351

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           ++    I  G+    ++ V   L+
Sbjct: 352 DAKIMEIAEGTNEMQLIAVSRALQ 375


>gi|294886029|ref|XP_002771522.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239875226|gb|EER03338.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 412

 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 25/269 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I LG+TE   G+D+A I +   K  D  Y ++G K +++  +   +I LA   G  G   
Sbjct: 146 IALGITEPTAGSDVAQIKTTAVKRGDE-YVVNGQKKWITGGLIADYITLAVRTGSEGMNG 204

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVED 311
           +  L  D    G+  + L         +T      V +   N  G   G           
Sbjct: 205 ISLLCVDMKSPGITVRGLPTMGDTDLKSTFVTFDDVRVPAENLIGVENGGFIALMENFNH 264

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            ++LI    A+ +  G R   + A+ +A +R   G  LI+  V++  +A++A  + +   
Sbjct: 265 ERLLI----AVGAARGARRCYSLALKHAMKRKTFGKKLIEHQVIRYKLAEMARMVESLWT 320

Query: 372 LSFRLANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE- 427
               +   F +    +    + A  ++ A     +C +       EA++  GG+G   E 
Sbjct: 321 EVEHVGLQFKQRVPDRQLGADCAILKVNASKAFEYCAR-------EAVQIFGGAGVTREG 373

Query: 428 --RSIARHYRESPANSILLGSGNAMVLDV 454
             R + R YR    ++I  GS   ++LD+
Sbjct: 374 QGRYVERLYRSVRLSAIPGGS-EEILLDL 401


>gi|23500935|ref|NP_697062.1| isovaleryl-CoA dehydrogenase [Brucella suis 1330]
 gi|254690335|ref|ZP_05153589.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254694824|ref|ZP_05156652.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254696452|ref|ZP_05158280.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700836|ref|ZP_05162664.1| isovaleryl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254705202|ref|ZP_05167030.1| isovaleryl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254707278|ref|ZP_05169106.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254709180|ref|ZP_05170991.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254713396|ref|ZP_05175207.1| isovaleryl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254716247|ref|ZP_05178058.1| isovaleryl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256030704|ref|ZP_05444318.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256060163|ref|ZP_05450345.1| isovaleryl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256112526|ref|ZP_05453447.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256158707|ref|ZP_05456586.1| isovaleryl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256254109|ref|ZP_05459645.1| isovaleryl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|256258589|ref|ZP_05464125.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260169607|ref|ZP_05756418.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261215151|ref|ZP_05929432.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261218023|ref|ZP_05932304.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261321128|ref|ZP_05960325.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|23346789|gb|AAN28977.1| isovaleryl-CoA dehydrogenase [Brucella suis 1330]
 gi|260916758|gb|EEX83619.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260923112|gb|EEX89680.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261293818|gb|EEX97314.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|326408030|gb|ADZ65095.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326537748|gb|ADZ85963.1| isovaleryl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|262376572|ref|ZP_06069801.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308711|gb|EEY89845.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 399

 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  D  Y L+G K F++S   +DA ++ A ++ ++G    
Sbjct: 130 MAITESGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADAVVVWATLDKKLGRSAI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+V +    G+P G+  +RL++K+G +S+ T  + F N
Sbjct: 189 KSFVVTK----GTP-GMKVERLEHKLGIKSSDTAMISFIN 223


>gi|163790521|ref|ZP_02184951.1| butyryl-CoA dehydrogenase [Carnobacterium sp. AT7]
 gi|159874274|gb|EDP68348.1| butyryl-CoA dehydrogenase [Carnobacterium sp. AT7]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 20/262 (7%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF-IMLAQVEGRVGCF 256
           G   TE +GG+++   T+   K  D  + L+G+K  +++  ++  + ++L      + CF
Sbjct: 119 GFSSTEPQGGSNVMGFTASAVKDGDK-WILNGNKTMITNGGLAQVYCVLLKTAPNELSCF 177

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           LV     D    G  + + +  IG       E+   N   T   LLG +       ++  
Sbjct: 178 LV-----DEDMPGFKHGKREEFIGMTGTPVGEIFLENVTVTEEHLLGKIGQGVEIGDNAH 232

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAIADIALDIAAATAL 372
               +    ++      +L  A+ YA++R       ID P+++  +I     +IA A   
Sbjct: 233 YDARISMGAIAAGITEHALTIAVDYAKKRDA-----IDTPIIQLHSIQTKITEIAIAKEN 287

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  L    + AK + E  +YA++ + + K +  + A      A++ +GG GY  E  +  
Sbjct: 288 AQLLYQ--EAAKLKIEGKSYAKV-STMAKSYGSRAAVIAADHALQVLGGYGYSREYPVEH 344

Query: 433 HYRESPANSILLGSGNAMVLDV 454
             R++ A  +  GS   M++++
Sbjct: 345 LIRDARALQLAEGSLEKMMIEI 366


>gi|260574800|ref|ZP_05842802.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259022805|gb|EEW26099.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 387

 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  + +   ++  G + L+G K F+S + ++D A + +A  E       
Sbjct: 123 LAMTEPGAGSDLRGMKATA-RLEGGDWVLNGTKHFISHADLADFAIVFMASGEEDTPRGR 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             R+  F V +    G+P        +N + +R      LEF N       +LG+ +   
Sbjct: 182 KKRITAFFVDK----GTPGFTVRDGYRN-VSHRGYTNAILEFDNCRLPAAQVLGEAHKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  AI YA  R   G  +     +   +AD+A+++
Sbjct: 237 DVANTWLGATRLQVASTCLGRAERALGLAISYAAERRQFGQQIGKFQGVSFKLADMAMEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A  FD+      + + A++ A        ++   V  EA++  GG G ++
Sbjct: 297 KAAELLTREAAWKFDQGTVTEADMSMAKLKA-------TEVLAMVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|330963300|gb|EGH63560.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 383

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 41/272 (15%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP      +P G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVP----TDNP-GFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA- 358
             L+++   +E  +I I    A  ++   R +   A+ YAR R     +  D+P+++   
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARER-----VQFDKPIIEHQS 281

Query: 359 ----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
               +AD+   I A+  L    A      K    EA+ A++ A     W C       ++
Sbjct: 282 IANLLADMHTRINASRLLILHAARLRSAGKPCLSEASQAKLFASEMAEWVC-------SK 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 335 AIQIHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|323650076|gb|ADX97124.1| mitochondrial acyl-CoA dehydrogenase family member 9 [Perca
           flavescens]
          Length = 340

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 37/255 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQVE--------G 251
           LTE   G+D A+I ++     D   Y +SG K W  +  M+D   + A+ E         
Sbjct: 64  LTEPGSGSDAASIQTRATLSEDLKHYLISGSKIWISNGDMADVMTVFARTEVVVDGVKKD 123

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
           ++  F+V R        G+   + ++K+G R + T E+ F        N  G + G   V
Sbjct: 124 KISAFIVERAF-----GGVTSGKPEDKLGIRGSNTCEVSFDNVPVPVENVIGEIGGGFKV 178

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +   +   +  +   SA     GM   L E    YA  R      L +  +++   A +A
Sbjct: 179 AMNILNSGRFSMGSSSA-----GMIKKLIEMTAEYAATRKQFNKSLAEFGMIQEKFALMA 233

Query: 364 LDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           L+     ++++  A   D       S EAA  ++ +     W C       +EA++ +GG
Sbjct: 234 LNAFVMESMAYLTAGMMDRPGLPDCSLEAAMVKVFSS-EGGWICT------SEALQILGG 286

Query: 422 SGYIEERSIARHYRE 436
            GY +     R+ R+
Sbjct: 287 LGYTKNYPYERYVRD 301


>gi|284045849|ref|YP_003396189.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950070|gb|ADB52814.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 394

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 20/221 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+          +TE   G+D+AA+  +  +   G Y LSG K W  ++P +D +++ A+
Sbjct: 128 PVVSGDAVAAFAMTEPDAGSDVAALALEAHR-DGGDYLLSGTKVWISNAPDADVYVVFAR 186

Query: 249 V---EGRVG--CFLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLL 299
                 R     F+VP     G   GL  + L+    + +G      V +  S   G + 
Sbjct: 187 TGNGNARTSQTAFIVP-----GDAPGLTGEPLELIVSHPVGRLVFDNVRVPSSAVVGEVG 241

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               +    +E  +I +        ++  + +L   I + +RR   G  L  +  +   +
Sbjct: 242 QGWEIGMKTLEQFRISV----GAFGLAVSQAALDATISFLKRREQFGAPLSTRQALAHRV 297

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           A++   + AA  L +  A  FD  +     +A A++ A  T
Sbjct: 298 AELTSQLTAARLLIYHTAERFDAGEPDGRLSAMAKLRATET 338


>gi|254427852|ref|ZP_05041559.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194021|gb|EDX88980.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 401

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 24/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +  ++  D  Y L+G K F++S   +D  ++ A ++ ++G   +
Sbjct: 132 MAITEPGCGSDSAAIRTTAKEDGDH-YILNGEKIFVTSGERADCVVVWASLDPKLGRAAI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313
              + D    G+   RL+ K+G R++ T  + F +     +   N+   P  D K     
Sbjct: 191 KSFVVDWGTPGMELARLEKKLGIRASDTAAINFVDC---RVPAENLLGSPEIDTKKGFAG 247

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--QPV-----MKRAIADIALDI 366
           ++   D+    V+ M +  A+A     +  +   I  D  +PV     ++  I  +  D 
Sbjct: 248 VMETFDNTRPLVAAMAIGCAKASLERIKELLKDSISYDYGKPVDNCSAVEAEIYKMEADW 307

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ + A   D  K+ + EA+       I+K    ++   +    +E  G  GY E
Sbjct: 308 EAAYWLAVKAAWMADNKKANTLEAS-------ISKAKAGRVGNYITLRCVELAGSLGYTE 360

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + +  R+S    I  G+
Sbjct: 361 DELLEKWARDSKILDIFEGT 380


>gi|169628939|ref|YP_001702588.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240906|emb|CAM61934.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 379

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 42/303 (13%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +HK  + ++  RE+     AP  +      + +TE   G+D+A I +  ++  D 
Sbjct: 93  MATPSLHKHGSDEL-KREF----LAPALRGEQIAAIAVTEPDAGSDVAGIKTHARRDGDD 147

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K F++ S  +D   +LA+     G   + +++      G   ++L +K+G  +
Sbjct: 148 -WVINGSKMFITNSVQADWLCVLARTSDEGGYAGMSQIIVPTKAPGYEVRKL-DKLGMHA 205

Query: 284 NAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           + T       V +  SNT G       +  G  + M   +     +    G+  S+  A+
Sbjct: 206 SDTGLITFDDVRVPVSNTIG------EIGRGFQQQMSQFVM--ERMFGAYGIPASVNRAL 257

Query: 337 H----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                YA  RHV G  L     +    A +A         +  +A  +   ++ + +   
Sbjct: 258 QRTKEYALARHVFGKPLTKNQHLAYQYAGLAARADMLEVYNRDIAERYMAGENVTRKVTI 317

Query: 393 ARIMA-PITKY---WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A++ A P+ +    WC           ++  GG GY+ E   +R +R+    SI  G+  
Sbjct: 318 AKLTAGPLVREAGDWC-----------LQVHGGMGYMTETWTSRFFRDQRLLSIGGGADE 366

Query: 449 AMV 451
            M+
Sbjct: 367 VMM 369


>gi|115449575|ref|XP_001218642.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114187591|gb|EAU29291.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 434

 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 114/265 (43%), Gaps = 13/265 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D+A I +  ++  D +Y ++G K ++++ +   +   A   G  G   V 
Sbjct: 154 LGVTEPDAGSDVAGICTTAERRGD-VYIVNGAKKWITNGIFADYCTAAVRTGGPGIQGVS 212

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVEDMK 313
            L+   +  G+  ++++N   N S +T      VE+  SN  G       +        +
Sbjct: 213 ALVIPLNAKGVMRRKIENSGVNASGSTYIEFDQVEVPVSNLLGQENKGFPIIMSNFNHER 272

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + +   S  M+    RV   +A  +A  R   G  LI+  V++   + +   + +  A  
Sbjct: 273 LWLACTSLRMA----RVCAEDAYRHAINRETFGKKLIENQVIRAKFSVMGRSLDSTYAWM 328

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +L      A+    +AA   + A + K    +    V  EA + +GG GY +    AR 
Sbjct: 329 EQLVYMAQMAQKDGRDAAMGGLFANL-KVLAGRTLEMVNREAQQVMGGLGYSKNGRGARI 387

Query: 434 YRES-PANSILLGSGNAMVLDVLNL 457
            + S     +++G G+  +L  L++
Sbjct: 388 EQVSRDVRVMVVGGGSEEILTDLSI 412


>gi|308048861|ref|YP_003912427.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307631051|gb|ADN75353.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 389

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D   + ++ ++   G Y LSG K W  +
Sbjct: 112 FGSEQQKARYLPGLASGEQIGAFGLTEPDHGSDPGGMATRARRDGRG-YRLSGSKTWITN 170

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D F++ A+  + ++  F++ R +      GL   ++  K+  R++ T E+   + +
Sbjct: 171 SPLADVFVVWAKTDDDQIRGFILERGMA-----GLSTPKIDGKLALRTSVTGEIVLEDLW 225

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +L  ++   GP         L++A   ++   +  AEA  +  R +        +
Sbjct: 226 LDEAQMLPGVSGLKGPFS------CLNNARYGIAWGAMGAAEACWHTARDYTLDRTQFGR 279

Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           P     +++  +A++  +IA A   + R A     A S S +      +  + K   C  
Sbjct: 280 PLAATQLVQTKLANMQTEIALALQGALR-AGEMMTAGSISPD------LISLIKRNNCGK 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  + RH
Sbjct: 333 ALDIARTARDMLGGNGISDEYPVMRH 358


>gi|72061173|ref|XP_785958.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
 gi|115965650|ref|XP_001177809.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
          Length = 444

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 29/246 (11%)

Query: 200 LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVG 254
            GLTE   G+D A + ++     S   Y L+G K W  +SP++D F++  +     G++ 
Sbjct: 181 FGLTEPNHGSDPAGMETKAVYNPSSKTYTLNGAKSWITNSPIADVFVVWGKNHEEGGKIR 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307
            F++ + ++     GL    +  K   R++AT       VE+   N    +L ++    G
Sbjct: 241 GFILEKGMK-----GLSAPYIDGKFSLRASATGQIVMEDVEIPEEN----MLPNVKGLGG 291

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           P   +    Y   A  ++      L  A  Y   R   G  L    +M++ +AD+  +I+
Sbjct: 292 PFGCLNNARY-GIAWGTLGAAEFCLETARQYTLDRVQFGSPLARNQLMQKKMADMLTEIS 350

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                  ++    D+ K+  +       M  + K   C  +  +   A + +GG+G  +E
Sbjct: 351 LGLQSCIQVGRLKDQGKATPD-------MISLIKRNSCGKSLDIARVARDMLGGNGICDE 403

Query: 428 RSIARH 433
             + RH
Sbjct: 404 YHVIRH 409


>gi|326329901|ref|ZP_08196216.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952292|gb|EGD44317.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 454

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 112/241 (46%), Gaps = 20/241 (8%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ + ++   K +DG Y ++G K  ++    ++ F++ A ++G+   FLV    E  +P 
Sbjct: 227 DVLSPSTTATKTADG-YTITGAKSLVARGAEAELFVVGASLDGKPVLFLV----ESSTP- 280

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL  +  +  +G R+ +  +L  ++       +LG+ + ST    +   L  L    +S+
Sbjct: 281 GLSIES-EPAMGVRAASLTKLTLTDVKVPATAVLGETDGST--YTEAVRLSRLAWCALSI 337

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L     Y + R   G  +  +  +   +A+IA+++ A   ++++ A+   +   
Sbjct: 338 GVGQAVLDYVTPYVKEREAFGEPIAHRQSVAFMVANIAIELQAMRLVTYKAASRVAQGID 397

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E A AR +       C      +  + ++ +GG G+++E  + R YR+  A  I+ G
Sbjct: 398 ATREIALARKL-------CADKGMQIGLDGVQLLGGHGFVKEHPVERWYRDLRAIGIMEG 450

Query: 446 S 446
           +
Sbjct: 451 T 451


>gi|291392161|ref|XP_002712608.1| PREDICTED: long-chain acyl-CoA dehydrogenase-like [Oryctolagus
           cuniculus]
          Length = 396

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 41/264 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247
           P       IG + +TE   G+D+  + +  +K  DG  + L+G K F+++      +++ 
Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKTFITNGWLSDVVIVV 216

Query: 248 QVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            V  R          E  SP +G+    ++N +                GF+ G      
Sbjct: 217 TVTNR----------EARSPAHGISLFLVENGMK---------------GFIKGQKLHKM 251

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G     ++LI    A ++VS       E  +Y ++R   G  +     ++  +A++  +I
Sbjct: 252 GLKAQERLLI----ADLAVSAGEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTNI 307

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               A         D  K R + A      A + KYW  ++   V  E ++  GGSGY+ 
Sbjct: 308 CVTRAFVDSCLQLHD--KKRLDSAG-----ASMAKYWASELQNHVAYECVQLHGGSGYMW 360

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IA+ Y ++    I  G+   M
Sbjct: 361 EYPIAKAYVDARVQPIYGGTNEIM 384


>gi|256368485|ref|YP_003105991.1| isovaleryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|255998643|gb|ACU47042.1| isovaleryl-CoA dehydrogenase [Brucella microti CCM 4915]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|83648661|ref|YP_437096.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|81248645|gb|ABB69072.1| putative L-prolyl-PCP dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636704|gb|ABC32671.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 32/259 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-----VGC 255
           +TE   G+D  A+ +   +  D  Y L G K F++ +P++D F++ A+ +       V  
Sbjct: 127 ITEPESGSDAFAMRASAVRDGD-TYILRGEKCFVTNAPVADLFLIYAKTDPSQSFFGVSG 185

Query: 256 FLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           FLVPR      + + GS  GLC     +  G+       +  S     LLG+        
Sbjct: 186 FLVPRDTPGLSVTDGGSKTGLC----TSPWGSLYMDDCRIPASA----LLGEEGGGAPMF 237

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            D   +I+    + +  V  M   L ++I +AR R   G  +     +   + D+ L + 
Sbjct: 238 HDS--MIWERGCLFAAYVGAMERVLQQSIDHARNRKQFGQSIGRNQSISDRLVDMKLRLE 295

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  L +R    +D+ +   E  A       ++K W  + +     +AM+  GG+G    
Sbjct: 296 TSRLLLYRAGWLYDQGEPYEEAIA-------LSKLWISECSVLSGLDAMQVFGGTGVSSA 348

Query: 428 RSIARHYRESPANSILLGS 446
             + R   +S  + I  G+
Sbjct: 349 AGVDRLLLDSLPSRIFSGT 367


>gi|239983511|ref|ZP_04706035.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455331|ref|ZP_06594721.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358280|gb|EFE85182.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 380

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 22/260 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +  +   D  + L+G K F+S+  ++D  ++ A+     G   +
Sbjct: 124 IAMTEPGAGSDLQGIRTTAEDKGD-HFLLNGAKTFISNGILADLVVVAAKTTPEGGAHGL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             L+ +    G    R  +KIG +S  T EL F +       LLG+ + +      + ++
Sbjct: 183 SLLVVERGAEGFERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGERDGAF-----LHLM 237

Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    M+++   ++ AE +      Y + R   G  L     ++  IA++A + A   
Sbjct: 238 TNLAQERMAIAVAAITAAEHLVEITSTYVKEREAFGRPLSRLQHIRFEIAEMATECAVTR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   R      E K  +       + A + K+W  ++        ++  GG GY+ E  +
Sbjct: 298 AFLDRCIADHAEGKLDA-------VHASMAKWWATELQKRTADRCLQLHGGYGYMNEYPV 350

Query: 431 ARHYRESPANSILLGSGNAM 450
           A+ + +    +I  G+   M
Sbjct: 351 AKAFTDGRIQTIYGGTTEIM 370


>gi|254436739|ref|ZP_05050233.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252185|gb|EDY76499.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 406

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 25/243 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + +   K + G Y +SG K W  ++P++D F++ A+ +   G  + 
Sbjct: 148 FGLTEPDAGSDPAGMKTSAVKTATG-YKISGAKMWISNAPIADVFVVWAKSDDHSGN-IR 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +LE G   GL   ++  K+  R++ T E+           LL ++    GP       
Sbjct: 206 GFILEKGM-MGLSAPKIGGKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGPFG----- 259

Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+ A   ++   +  AE   H ARR    R   G  L    + ++ +AD+  +I    
Sbjct: 260 -CLNRARYGIAWGVMGAAEFCWHAARRYGLDRKQFGKPLAQTQLFQKKLADMQTEITLGL 318

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + +L    D  K+       A  M  + K   C  A  +   + +  GG+G  +E  I
Sbjct: 319 QSALQLGRLMDAGKA-------APAMISMMKRNNCGKALDIARASRDMHGGNGISDEFHI 371

Query: 431 ARH 433
            RH
Sbjct: 372 MRH 374


>gi|254385845|ref|ZP_05001164.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|254387164|ref|ZP_05002433.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194344709|gb|EDX25675.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345978|gb|EDX26944.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 18/238 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D AA+ +  ++  DG  + L+G K W  +  ++   ++ AQ +  +  F 
Sbjct: 135 FGLTEPDVGSDPAAMRTYAKR--DGTDWVLTGRKMWITNGSVAAVAVVWAQTDEGIRGFA 192

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP         G     +K+K   R++ T EL   +        L   TG    +  L +
Sbjct: 193 VPT-----DSAGFSAPEIKHKWSLRASVTSELVMDDVRLPADAVLPGVTGLKGPLGCLSH 247

Query: 318 LDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I+  S+   R S   A+ YAR R   G  +    + +  +AD+AL++     L+  
Sbjct: 248 ARYGIIWGSMGAARASFESALDYARTREQFGKPIGGFQLTQAKLADMALELHKGILLAHH 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L    D    R E+ ++ ++         C+ A  V       +G +G   E  + RH
Sbjct: 308 LGRRMDAGTLRPEQISFGKLNNVREAIEICRTARTV-------LGANGISLEYPVMRH 358


>gi|260903973|ref|ZP_05912295.1| acyl-CoA dehydrogenase domain protein [Brevibacterium linens BL2]
          Length = 398

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 122/307 (39%), Gaps = 32/307 (10%)

Query: 136 RAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP-MQ 192
           R+A  Y +A  +LEAG   S   T  S+   +    +HK      F  E       P M 
Sbjct: 83  RSAVEYGLAAMELEAGD--SGLRTFVSVQGSLAMSAIHK------FGSEEQKNRYLPGMA 134

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           K  +    GLTE   G+D  ++ +   +  DG + L+G K W   + ++D  ++ A  + 
Sbjct: 135 KGEIIGCFGLTEPTAGSDPGSMATTATRNDDGSWTLNGAKRWIGLASIADIAVIWAATDE 194

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
            +  FLVP         G     ++ K+  R++   +++  +       +L ++    GP
Sbjct: 195 GIRGFLVPT-----DTAGFTATPIEQKLSMRASIQCDIDIVDVQLPAEAVLPEVRGLKGP 249

Query: 309 VEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +    Y    IM  ++   R S   A+ YA+ R      L    + ++ + ++ L+I
Sbjct: 250 FSCLNEARY---GIMWGAMGAARDSYEVALKYAQERMQFDKPLSGYQITQQKLVNMVLEI 306

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                ++ +     D             +   + K   C+ A A+  EA   +GG+G   
Sbjct: 307 QKGILVALQTGRLKD-------AGTLDPVQISVGKLNNCREAIAICREARTMLGGNGITL 359

Query: 427 ERSIARH 433
           E S  RH
Sbjct: 360 EYSPLRH 366


>gi|84495304|ref|ZP_00994423.1| probable acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384797|gb|EAQ00677.1| probable acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 419

 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 25/267 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D  AI +   K  D  Y L+G K +++S   ++  ++ A ++  +G   +
Sbjct: 149 MAITEPETGSDSGAIRTTAVKDGDE-YVLNGEKIYVTSGERAELVVVWATLDKSLGKQAI 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD--LNVSTGPVEDMK 313
              +      G+   RL++K+G R++ T      N       LLGD  + +  G    M+
Sbjct: 208 KSFVVRRDNPGMKLVRLEHKLGIRASDTAAFHLDNCRVPADDLLGDPEIKIEGGFGGAMQ 267

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQPVMKRAIADIAL-----D 365
                D+    V+ M + L    +          G+ +  D+P   ++ A   L     D
Sbjct: 268 T---FDNTRPLVAAMALGLTRGCLDTTTELLEKAGVTVDWDKPAYTQSAAAAKLLQMEAD 324

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA AL+ R A   D  K  S EA+ A+  A  T   C  +A A +    E  G +GY 
Sbjct: 325 YEAAHALTLRAAWMADNGKPNSMEASMAKAKAGRT---CVNVALACV----ELAGATGYS 377

Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452
           E   + +  R+S    I  G+    +L
Sbjct: 378 ERELLEKWARDSKILDIFEGTQQIQLL 404


>gi|328847744|gb|EGF97087.1| hypothetical protein MELLADRAFT_54358 [Melampsora larici-populina
           98AG31]
          Length = 378

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHK-WF 234
           F  E       P   +   IG  GLTE   G+D A + +   + +DG   + L+G K W 
Sbjct: 96  FGSEEQKQRYLPELASGNMIGCFGLTEPSHGSDPAGMLTTAMEATDGSGGFVLNGSKTWI 155

Query: 235 LSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            +SP++D FI+ A+   +G++  F    +LE G P GL   ++++K+  R++ T
Sbjct: 156 TNSPIADVFIIWAKCKWDGKIRGF----ILEKGMP-GLSAPKIQHKLALRASTT 204


>gi|300310270|ref|YP_003774362.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073055|gb|ADJ62454.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 415

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----- 315
           ++  G+  G+    L + +G+R+  +  + F+N     +   N+   P + + +L     
Sbjct: 204 IMVPGNAPGIEIVGLLDTMGHRATISPRVHFNNV---RVPASNIVGKPGDGISMLEAAFS 260

Query: 316 ---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATA 371
                + SA + V  MR +   A+ +A+    SG I +I+   +   +ADI + I AA  
Sbjct: 261 WTAALIGSACVGV--MRTAFDIALRFAQSDRRSGTIPVIEHQNVGFMLADIKMRIEAARY 318

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           L+++  +  D  + RS E      +A ITK +C ++   V+ +AM  +G   Y +
Sbjct: 319 LTWKSCHQLDLTEGRSRE------LAIITKTYCSELCVQVVYDAMRVVGVDAYTD 367


>gi|16081378|ref|NP_393708.1| isovaleryl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
 gi|10639373|emb|CAC11375.1| probable isovaleryl-CoA dehydrogenase [Thermoplasma acidophilum]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 36/284 (12%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228
           + + + PK+ S +Y              IG L LTE   G+D  A+++   ++ DG   L
Sbjct: 105 IRETFVPKLASGDY--------------IGSLCLTEPGSGSDALAMSTHIDEV-DGELYL 149

Query: 229 SGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           SG K F++ +P +D F++ ++        +V  L  DG   G    R   K+G R + T 
Sbjct: 150 SGSKMFITNAPYADLFLVHSRDGDGYSSVIV--LASDG---GFNRGRSLEKMGMRGSPTG 204

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS-----AIMSVSGMRVSLAEAIHYARRR 342
           E+ F N      G +    G  + + I+  L+S     A + +   R ++ EA++YA +R
Sbjct: 205 EI-FFNRVRIEPGRIVGGRGSGKKI-IMSGLNSERVILAFIFIGLARRAIDEAVNYASQR 262

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + D  +++  ++ + +   A+  L+FR             +AA A IM      
Sbjct: 263 KQFGQHIADFELIQEKLSYMYVRYEASRMLAFRALEKLQFDMMDPIDAASA-IM------ 315

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  + A  +  EA++  GG GYI++  I    R++    I  G+
Sbjct: 316 YASESAEYIAREAIQIFGGYGYIKDTGIEMLLRDAILGQIGAGT 359


>gi|207739095|ref|YP_002257488.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206592468|emb|CAQ59374.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 29/270 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244
           P   T  AIG   LTE + G++   + ++   + DG + L+G K F++    + ++  F 
Sbjct: 112 PDLATGRAIGAFCLTEPQAGSEANNLRTRA-VLRDGRWVLNGSKQFVTNGTRAKLAIVFA 170

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +     G+ G   F+VP         G    R ++K+G R++ T  +   +     +   
Sbjct: 171 VTDPGAGKRGLSAFIVPT-----DTPGFHVGRPEHKLGIRASDTCPITLEDC---AVPQA 222

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMK 356
           N+   P E +KI L  L+   + ++   V +A A   A       R   G  L +   + 
Sbjct: 223 NLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L    A      K    EA+ A       K +  ++A  + ++A+
Sbjct: 283 NMLADMATRLNAARLLVHHAARLRSLDKPCLSEASQA-------KLYASELAEEICSKAI 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  GG GY+ + ++ RHYR++    I  G+
Sbjct: 336 QIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|119384353|ref|YP_915409.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119374120|gb|ABL69713.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 393

 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 21/230 (9%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG--RVGCFLVPRLLED 264
           GTD+ A +S      +  + L+G K  ++ + ++   +++ ++ G  R G  LV   L D
Sbjct: 126 GTDVRATSSTLAPGPNETFVLNGAKHNIAHAGIATMVLIVCKLAGERREGISLV---LVD 182

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL      +K+GN    T  LEF      +G LLG+     G + ++  L  L   
Sbjct: 183 TDRPGLRAGPPDHKLGNADLPTGRLEFDAMALDYGDLLGEPGRGLGNLVNIVSLGRLYYG 242

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           ++    +  +LAEA+ YA+RR   G  ++D   +++ + DI + I  +   ++    +  
Sbjct: 243 LVGGWLLEPALAEALDYAQRRQTFGVPILDHQYVQKKLTDIRIGIETSRWTAY---GALH 299

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEER 428
           +    + EAA +  +A I        A  VIA A++ +   G  GY E R
Sbjct: 300 QLLGGAPEAAMSCSIAKIAG------ADTVIAAAVDLLRLHGSDGYHEGR 343


>gi|307328909|ref|ZP_07608078.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885419|gb|EFN16436.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 395

 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 12/222 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P   +   IG  GLTE   G+D A + +  ++  DG  + L+G K W  
Sbjct: 118 FGSEEQKQQWLPRMASGEVIGCFGLTEPDHGSDPAGMRTYAKR--DGSDWVLTGRKMWIT 175

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A  +  +  F+VP         G     +K+K   R++ T EL      
Sbjct: 176 NGSVAGVAVVWAHTDEGIRGFVVPT-----DAPGFSAPDIKHKWSLRASVTSELVLDEVR 230

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L +    I+  S+   R +   A+ YAR R   G  +    
Sbjct: 231 LPADAVLPEVTGLRGPLSCLGHARYGIIWGSMGAARSAFESALDYAREREQFGRPIGGFQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +  +AD+AL++     L+  L    +  + R E+ ++ ++
Sbjct: 291 LTQAKLADMALELHKGILLAHHLGRRMEAGRLRPEQVSFGKL 332


>gi|262369599|ref|ZP_06062927.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315667|gb|EEY96706.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 380

 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 55/296 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLS 229
           W PK+ S E             V   +G+TE   G+D+ A+ S    QG+      Y L+
Sbjct: 110 WLPKMVSGE-------------VVGAIGMTEPGAGSDLQAMRSNAILQGEH-----YILN 151

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+S+   +D  ++  + + +     V  +L D   +G       +KIG  S  T E
Sbjct: 152 GSKTFISNGQHADLVVLAVKTDPQARAKGVSLMLVDTHLDGFKKGTNLDKIGLHSQDTSE 211

Query: 289 LEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           L + N               F +L+ +L     P E          A  ++  +R S+  
Sbjct: 212 LFYDNVKVPKDQLLGQAGQGFAYLMQEL-----PRERTA------IAATAIGAIRGSIDV 260

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y + R   G  +      +  +A   +D  A  A   +    + + K   E AA   
Sbjct: 261 TIQYVKERQAFGQHISQFQNTRFVLAQAKIDEQATAAFYNQNVELYMQGKLDVETAA--- 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 K +   M   V    ++  GG GY+ E  I+R + ++    I  G+   M
Sbjct: 318 ----ALKSFSTDMQMKVADNLLQLFGGYGYMSEYPISRFFVDARIQRIYGGTNEIM 369


>gi|289641780|ref|ZP_06473938.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508424|gb|EFD29365.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 43/259 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252
            G+TE   G D   IT+  ++  D  Y ++G K ++S  +    ++L         V+ +
Sbjct: 124 FGVTEPGAGLDTTRITTFARRDGDH-YVVNGRKVWISKALESEKVLLLTRTTKYEDVKKK 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
                +   L +   N +  + ++ K+G  + ++ EL         + DL +   PVED 
Sbjct: 183 TDGMTL--FLTNLDRNAVDIRPIR-KMGRNAVSSNEL--------FIDDLRI---PVEDR 228

Query: 313 ---------KILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                     +L  L+   M ++       R +L +A+ Y   R V G  +     ++  
Sbjct: 229 VGEEGAGFRYLLDGLNPERMLIAAEALGLGRAALRQAVRYGNEREVFGRPIGKNQGLQFP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD    + AA  +  +    +D+ K  + EA  A       KY C          A++ 
Sbjct: 289 LADSLAHLDAAELVLRKATWLYDQGKPCAREANTA-------KYLCADAGFQAADRALQT 341

Query: 419 IGGSGYIEERSIARHYRES 437
            GG GY EE  +AR++RE+
Sbjct: 342 HGGMGYSEEYPVARYFREA 360


>gi|85708702|ref|ZP_01039768.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85690236|gb|EAQ30239.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 42/259 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGR 252
            G++E   GTD  ++ ++  +  D  Y +SG K W   +  SD  ++LA      QVE +
Sbjct: 123 FGVSEPTSGTDTLSLKTRAVREGDE-YVVSGQKIWTSRAEHSDLMLLLARTTPRDQVEKK 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-----------NATVELEFSNTFGFL 298
              +  FLV   +++   NG+  + ++  + + S            +++  E    F ++
Sbjct: 182 TDGLSIFLVD--MQEALKNGMSIKPIRTMMNHSSCEVFFDDLRIPASSLVGEEGKGFRYI 239

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  +N         +ILI    A   +   +  + +A +YA  R+V    +     ++  
Sbjct: 240 LSGMNAE-------RILI----AAECIGDAKWFIEQAKNYAGDRNVFARPIGQNQGVQFP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA     + AA  +    A  +DE  +   EA  A+++A    +    M        ++ 
Sbjct: 289 IARCYAQMRAAELMVHHAAQVYDEGGNPGAEANMAKLLASEASWAAADMC-------VQT 341

Query: 419 IGGSGYIEERSIARHYRES 437
            GG G+ EE  + R +RE+
Sbjct: 342 FGGFGFAEEYDVERKFREA 360


>gi|328851334|gb|EGG00489.1| hypothetical protein MELLADRAFT_111712 [Melampsora larici-populina
           98AG31]
          Length = 358

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHK-WF 234
           F  E       P   +   IG  GLTE   G+D A + +   + +DG   + L+G K W 
Sbjct: 76  FGSEEQKQRYLPELASGNMIGCFGLTEPSHGSDPAGMLTTAMEATDGSGGFVLNGSKTWI 135

Query: 235 LSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            +SP++D FI+ A+   +G++  F    +LE G P GL   ++++K+  R++ T
Sbjct: 136 TNSPIADVFIIWAKCKWDGKIRGF----ILEKGMP-GLSAPKIQHKLALRASTT 184


>gi|209515322|ref|ZP_03264189.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504303|gb|EEA04292.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255
           LTE + G++   + ++     DG + L+G K F+++    +  ++  V     G+ G   
Sbjct: 125 LTEPQAGSEANNLRTRAVP-RDGQWILNGSKQFVTNGARASIAIVFAVTDPDAGKRGISA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP         G    R +NK+G R++ T  +   +     + + N+     E ++I 
Sbjct: 184 FIVPT-----DTPGFNVGRPENKLGIRASDTCPISLDDC---AIPEANLLGARGEGLRI- 234

Query: 316 IYLDSAIMSVSGMRVSLA-EAI-----------HYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A +AI            YA  R   G +L +   +   +AD+A
Sbjct: 235 -----ALSNLEGGRIGIAAQAIGIARAAFDAARAYANERIQFGKLLKEHQTIANMLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A   L    A      +    EA+ A++ A        ++A  V ++A++  GG G
Sbjct: 290 TRLNAGRLLVHHAARLRSAGRPCLSEASQAKLYAS-------ELAEEVCSKAVQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+E+ ++ RHYR++    I  G+
Sbjct: 343 YLEDYAVERHYRDARITQIYEGT 365


>gi|126738396|ref|ZP_01754101.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126720195|gb|EBA16901.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 387

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI--MLAQVE------ 250
           L +TE   G+D+  + +  ++  D  + L+G K F+S + ++D  I  M   VE      
Sbjct: 123 LAMTEPDAGSDLRGMKASARQDGDD-WILNGTKHFISHADIADFAICFMATGVEETPRGP 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG+++   
Sbjct: 182 KKKITAFFVDK----GTP-GFEVRDGYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  ++ YA  R   G  +     +   +AD+AL++
Sbjct: 237 DVANTWLGATRLQVAATCLGRAERALQHSVEYAVERKQFGQQIGKFQGISFKLADMALEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+      + + A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAANLLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAMVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|283993133|gb|ADB57042.1| acyl-CoA dehydrogenase [Heliothis virescens]
          Length = 421

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 47/268 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A + ++ +K  D  + ++G K W  +  +++ + +LA+      C     
Sbjct: 158 VTEPGAGSDVAGVKTRAEKKGDE-WIINGQKMWITNGGVANWYFVLARTNPDPKCPASKA 216

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298
              F+V R     SP      R +  +G R++ T  + F +               F   
Sbjct: 217 FTGFIVERDWPGVSPG-----RKEQNMGQRASDTRGITFEDVRVPKENVLIEEGAGFKIA 271

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G  + +  PV           A  +    + +L EA  YA  R   G  +     +   
Sbjct: 272 MGAFDKTRPPV-----------AAGATGLAQRALTEATKYALERKTFGVPIARHQAVAFM 320

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+ +  A     R A   D     +       ++A + K    ++A    A+A++ 
Sbjct: 321 LADMAIGVETARLAWMRAAWMADHGIRNT-------VLASVAKCHASEIANKAAADAVQI 373

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG+G+  E  + +  R++    I  G+
Sbjct: 374 FGGNGFNTEYPVEKLMRDAKIYQIYEGT 401


>gi|170722217|ref|YP_001749905.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760220|gb|ACA73536.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 387

 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 97/246 (39%), Gaps = 54/246 (21%)

Query: 217 QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDG 265
           QG K     Y ++G K W      SD  I+LA+           EG +  FLV   L D 
Sbjct: 143 QGDK-----YVINGQKVWISRVQHSDLMILLARTTPLPEVKKKSEG-MSIFLVD--LRDA 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVED 311
             NGL  Q + N + + +N   EL F N               F ++L  LN        
Sbjct: 195 IGNGLTVQPIANMVNHETN---ELFFDNLELPASSLIGEEGKGFRYILDGLNAE------ 245

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + LI    A   +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  
Sbjct: 246 -RTLI----AAECIGDGRWFVEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADL 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +R    +D  ++       A   A + KY   K +       ++  GG G+  E  + 
Sbjct: 301 MRWRACAEYDSGQN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVE 353

Query: 432 RHYRES 437
           R +RE+
Sbjct: 354 RKFRET 359


>gi|313885746|ref|ZP_07819495.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619111|gb|EFR30551.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 401

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 104/269 (38%), Gaps = 43/269 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCF 256
             LTE   G+DIA   +   +  +G + L+G K W   +  +D   + A+   + ++ CF
Sbjct: 143 FALTEPDHGSDIAGGLATTAEFKNGEWVLNGEKRWIGGAKTADFIPVFARDVADNKIKCF 202

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST---------- 306
           +V +        GL  + +++KI         L   N     L D+ V            
Sbjct: 203 MVAK-----GSEGLSVENVEHKIA--------LRIVNNGHITLKDVKVKDEDRLVNINGF 249

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G V  + +   +D A +++     +   A+     R      +    +++  +A +  ++
Sbjct: 250 GDVAKIFVFTRVDVAHIAMGTAAGAFNAALRLTTDREQFERKIASFQLVQEKLATMQANV 309

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  A S R+A          EE       + + K    K     +A A E  GG+G   
Sbjct: 310 AACIAYSARVA-------ELQEEGTAKMFNSSLAKLHNAKRMRETVALAREVCGGNGITY 362

Query: 427 ERSIARHYRESPA----------NSILLG 445
           E  +AR + ++ A          NS+++G
Sbjct: 363 ETEVARFFTDAEAIYTYEGTHEVNSLIVG 391


>gi|226292098|gb|EEH47518.1| acyl-CoA dehydrogenase family protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 516

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 40/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L ++E   G+D++ I +   K  DG  Y ++G  KW  +   +D F+   + E      L
Sbjct: 249 LAVSEAFAGSDVSGIRTTATKTPDGRHYIINGTKKWITNGMWADYFVTACKTEKGYSVIL 308

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           VPR         +  +R+K      +  T  ++F N       LLG+        E    
Sbjct: 309 VPR------DENIETKRIKTAYSTTAATTF-IQFDNVKVPVENLLGE--------EHNGF 353

Query: 315 LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD-IALD 365
           ++ + +        A M     R  + E + +A +R V G  LI+QPV+++ +A  I+L 
Sbjct: 354 IVIMSNFNHERWAMACMVSRWNRTVVEECLKWANQRIVFGKPLINQPVIRQKLAKMISLT 413

Query: 366 IAAATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A+ + L   ++++ N      S +++  +      + K +  + A  +  +A+   GG 
Sbjct: 414 EASQSWLETITYQMCNM-----SYAQQTKHLGGPIGLLKSYATRCAHQIADDAVNIFGGR 468

Query: 423 GYIEE---RSIARHYRESPANSILLGS 446
           G  +    R + + +R    ++IL G+
Sbjct: 469 GITQTGMGRVVEQFHRTYKFDAILGGT 495


>gi|114589059|ref|XP_001139669.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 644

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 203 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 262

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 263 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKIPVENILGE--VGDG 315

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 316 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 375

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 376 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 428

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 429 YTRDYPYERILRDT 442


>gi|120612453|ref|YP_972131.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590917|gb|ABM34357.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 403

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 10/267 (3%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
           G  +TE   G+D  A+ +  + + DG Y L+G K F+++   +D  +  A ++   G F 
Sbjct: 131 GFAITEPDIGSDATALRTTARPVRDG-YLLNGTKCFITNGARADFVVTFATLDKGRGRFG 189

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V     D +  G    RL+  +G R++    L +S+    +  D  +  G  ++  +   
Sbjct: 190 VRAFAVDSTAPGFEVVRLEKMLGLRASQLAVLSYSDC--LVPHDSLLQRG--DEGHMHDA 245

Query: 318 LDSAIMSVSGMRVSLAEAI--HYAR-RRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              A  S    R  L+  I    AR R  ++  +   QP           D+ AA     
Sbjct: 246 FSGAQSSWDFFRPVLSATIVGSCARARDELAAYLAAHQPAAPGWRRTDTEDLLAAAGGKI 305

Query: 375 RLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +A     +A  R E+       + + K +  ++A  +    ++ +G  G  E   + R 
Sbjct: 306 AMARLLCHKAAWRHEQGLSVSKDSSMAKAYASRIAMEIAEAVLQAVGAPGLHEHPVLERF 365

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           YR + A  IL G+G+   L V  L ++
Sbjct: 366 YRNAKAYDILEGTGDMQRLMVARLQQR 392


>gi|111023073|ref|YP_706045.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822603|gb|ABG97887.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 33/271 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252
           + ++E   G+D+  ++++ +K +DG + ++G K W  ++  +D  +++A+    +G+   
Sbjct: 124 ISMSEPEAGSDVGNLSTRAEKTADG-WVINGQKTWCSNAHFADNILLVARTGRGDGKHEG 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F VP         GL    +    G   N   +L F++       ++G+  V  G  
Sbjct: 183 LTMFHVP-----ADTAGLKISGIDTMGGKEVN---DLYFTDCVLPEDAVVGE--VGNGWR 232

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M  L +  L  A M +   + + A+ + +  +R   G  +     ++  IAD+A +I 
Sbjct: 233 QLMTGLNFERLILAAMMLGTAQRAFADTLDFVTQRKQFGRPVGSFQALRHRIADLATEIE 292

Query: 368 AATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
               L + +A   D    +  + EA+ A++    T       A  V  E M+ +GG GY 
Sbjct: 293 CCKLLVYSVAKDVDANPDKMLAREASMAKLKVTET-------AKKVALEGMQMMGGYGYA 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E  + +H R +  ++I  G+ N +  D++ 
Sbjct: 346 TEFDMEKHVRSTIVSTIYGGT-NEIQRDIIG 375


>gi|90425738|ref|YP_534108.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107752|gb|ABD89789.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 390

 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 65/292 (22%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +W PKI S E        +Q        G+TE   GTD +++ +  +K  +G Y ++G K
Sbjct: 109 EWLPKIASGE------VRLQ------AFGVTEPSSGTDTSSLKTFAKKDDNGDYVVNGQK 156

Query: 233 -WFLSSPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            W   +  SD  I+LA+   +         +  FLV   ++    +GL  + ++  +   
Sbjct: 157 IWTSRAEYSDLMILLARTTPKEQSAKRTDGLSVFLVD--MKQAKDHGLTIRPIRTMM--- 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +++T E+ F++               F ++L  +N         +ILI    A   +   
Sbjct: 212 NHSTTEVFFTDLHVPAENLIGEEGKGFRYILSGMNAE-------RILI----ASECIGDA 260

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  +A+A  YAR R V G  +     ++  IA     + AA  +    A  ++       
Sbjct: 261 KWFIAKATAYARERVVFGRPIGQNQGIQFPIAKAYAAMRAAELMVKEAARKYEAGLDCGA 320

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           EA  A+++A          A A    A  C+   GG G+ EE  + R +RE+
Sbjct: 321 EANMAKMLA----------ADASWEAANACVQTHGGFGFAEEYDVERKFRET 362


>gi|304392966|ref|ZP_07374897.1| probable acyl-CoA dehydrogenase fadE25 [Ahrensia sp. R2A130]
 gi|303294964|gb|EFL89333.1| probable acyl-CoA dehydrogenase fadE25 [Ahrensia sp. R2A130]
          Length = 403

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 53/281 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VG 254
           +TE   G+    +T+  +++  G Y L+G K W     +S   ++ A+V G       +G
Sbjct: 121 ITEPDAGSAATEMTTTAKRVPSG-YVLNGRKHWITGGGVSKLHVIFARVLGDESGEEGIG 179

Query: 255 CFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            F+V R  ++G  P+G      +N +G       EL F N F                  
Sbjct: 180 AFIVLRDPDNGIEPDGFIIAGRENTMGLCGMPEAELVFDNLF------------------ 221

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMKRAIA------DIAL 364
             I    A+   SG++   A+ ++    + V  G +   +     +RA            
Sbjct: 222 --IEERYALRPPSGLKRGFADLMNAYNSQRVGAGTIAMGVAAGATERATKYMKERQQFGR 279

Query: 365 DIAAATALSFRLAN---SFDEAKSRSEEAAYAR----------IMAPITKYWCCKMAPAV 411
            IA    L + LA+       ++   +EAA +R          +MA   K +  + A  V
Sbjct: 280 PIAEFQGLQWMLADMDAGVHASRLMLQEAARSRGPNGSTFPDMMMAARAKAFASQTAIRV 339

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           + +A++  G  GY +   + R YR+       +G G A +L
Sbjct: 340 VDDALQMFGARGYSDREPLERMYRD--VRMFTIGGGTAQIL 378


>gi|239996584|ref|ZP_04717108.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii ATCC 27126]
          Length = 344

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251
           + LTE   G+ +A I +  +   DG Y + G K ++S     +SD  +  +LA++ G   
Sbjct: 162 MALTEPHAGSSLADIRTSARPQDDGTYRIKGSKIYISGGEHELSDNIVHLVLAKIPGGPA 221

Query: 252 ---RVGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLG 300
               +  F VP  RL  DG+P   N +    L +K+G R   +  L F    +  G+L+G
Sbjct: 222 GVKGISLFAVPKYRLDADGNPDVRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLIG 281

Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           +    L      + + +I +   +A++   G R SL     YA+ R
Sbjct: 282 EPHQGLRYMFMMMNEARIGVGYGAAMIGYRGYRYSL----EYAKDR 323


>gi|167839083|ref|ZP_02465860.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G   
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VP         G    + + K+G R++ T  +   N     +   N+     E ++I 
Sbjct: 184 FVVP-----ADTPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGRRGEGLRI- 234

Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A
Sbjct: 235 -----ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G
Sbjct: 290 TQINAARLLTHHAARLRTAGLPCLSEASQAKLFA-------SEMAEAVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           ++ +  + RHYR++    I  G+
Sbjct: 343 FLVDYEVERHYRDARITQIYEGT 365


>gi|148555167|ref|YP_001262749.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148500357|gb|ABQ68611.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 386

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 52/273 (19%), Positives = 121/273 (44%), Gaps = 24/273 (8%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + + +G++E   G+ +  + ++G    D +      +W      +DA+++  ++   
Sbjct: 117 KGEMVVAIGMSEPDAGSALTDLKTKGVVKGDRLVINGTKRWCSGGGHADAYLVYCRLSDD 176

Query: 253 VGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            G    PR     L+E G+P G  +   +  +G R   + +L F +     L ++ V  G
Sbjct: 177 PG----PRAIGAVLVEKGTP-GFGFGPNEQLMGFRGVPSADLTFDDV-EVPLDNIVVPAG 230

Query: 308 PVEDMKILIYLD---SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             + +     L+   +A M++     +L +   Y + R   G  +++   ++  +A++ +
Sbjct: 231 GFKKLMETFDLERCGNATMALGQASGALEDVTDYVQERRQFGKPIVEFQAVQLKLAEMHM 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R       A + +E+   + + +   K +   +A  V  +A++ +G  GY
Sbjct: 291 KVDAARLLIWR-------AAANAEDGLPSILDSSTAKCFANSIAREVAGDAVQLMGAYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            ++  + R  R+S    I   +G A+ +  +N+
Sbjct: 344 SKDFPMERRLRDSWGWGI---AGGAIDIQKVNI 373


>gi|72161783|ref|YP_289440.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915515|gb|AAZ55417.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 409

 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 53/302 (17%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQG-QKISDGIYCL 228
           +W P++F    D             I LG   ++E   G+D+ AI ++     +   + L
Sbjct: 115 EWTPQMFGTPDD-------------IKLGAFCVSEPDAGSDVGAIRTRAVYDEAKDEWVL 161

Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +G K W  +  ++D  +++A V+  +G      F++P         GL   +  +K G R
Sbjct: 162 NGTKTWITNGGIADVHVVVASVDPELGTRGQASFVIPP-----GTKGLSQGQKFSKHGIR 216

Query: 283 SNATVELEFSNTF---GFLLG-------------DLNVSTGPVEDMKILIYLDSAI--MS 324
           ++ T E+   +       LLG             +   S G    MK       A+  M+
Sbjct: 217 ASHTAEVILDDVRIPGRCLLGGKEKLDQRLARAREGRRSKGQAA-MKTFEASRPAVGAMA 275

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  Y R+R   G  + D   +   +AD+A  I AA  L +R +      K
Sbjct: 276 VGCARAAYEYARDYVRQREQFGRPIGDNQAVAFTLADMATRIDAARLLVWRASWMARYGK 335

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                  +A     ++K +  + A  V   A+  +GG+GY  +  + R +R++   +I  
Sbjct: 336 E------FANAEGSMSKLYASETATWVTQNAIRLLGGNGYTRDYPVERWHRDATIFTIFE 389

Query: 445 GS 446
           G+
Sbjct: 390 GA 391


>gi|297569259|ref|YP_003690603.1| acyl-CoA dehydrogenase domain protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925174|gb|ADH85984.1| acyl-CoA dehydrogenase domain protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 383

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 115/258 (44%), Gaps = 25/258 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D + I +   K  D  + L+G K W  ++  +  + ++A  + + G    
Sbjct: 122 FALTESGAGSDASGIQTTAVKDGDH-WVLNGTKQWITNAGEAGIYTVIAITDRKRGARGA 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + + +  G      + K+G R ++T E+   +    +  D  +    +  + ++  L
Sbjct: 181 TMFVVEDTDPGFSVGPKEKKMGIRCSSTREVILKDCR--IPADRVIGRPGLGFITVMKTL 238

Query: 319 D-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIALDIAA 368
           D      A + V   + +L EA+ YA++R     I  D+P++        +AD+A+ + A
Sbjct: 239 DLSRPGIATLGVGLGQAALDEAVRYAKQR-----IQFDKPIISFQAVSHMLADMAIQVEA 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL +  A   D    ++ +A      + + K +   MA  V  +A++ +GG G++ E 
Sbjct: 294 ARALVYAAARHVDAHPDKASKA------SSVCKTFATDMAMKVTVDAVQVLGGYGFMREY 347

Query: 429 SIARHYRESPANSILLGS 446
            + +  R++    I  G+
Sbjct: 348 PVEKMMRDAKILQIYEGT 365


>gi|284029387|ref|YP_003379318.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808680|gb|ADB30519.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 34/274 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS---SPMSDAFIMLAQV----E 250
           G GLTE   G+D  A  ++ + + DG  + + G K F++   S ++    + A+     +
Sbjct: 122 GFGLTEPDSGSDAGA--TRTRAVLDGDEWVIDGSKQFITNSGSSITSVVTVTARTGERAD 179

Query: 251 GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD 301
           GR  +   +VP     G+P G   +   +K+G  ++ T  L F+       N  G     
Sbjct: 180 GRPEISTIIVPA----GTP-GFVAEAQYDKLGWHASDTHPLTFTGCRVPQENLLGRRGKG 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  ++D ++ I      +++  ++  L  ++ YA  R   G  +  +  +   I+D
Sbjct: 235 FAQFLATLDDGRVAI----GAVALGCIKACLEMSVQYAGERKTFGVPIGQKQGVAFQISD 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA  L +R A   D   S  E     +  A + K +  + A      A +  GG
Sbjct: 291 LKVMADAAELLVYRAAALKDSGASVQE----FKQAAAVAKLYATESAVTATRIATQVFGG 346

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            G++EE  + R YR+  A  + +G G + V  +L
Sbjct: 347 YGFMEEYPVTRFYRD--AKILEIGEGTSEVQRML 378


>gi|120405164|ref|YP_954993.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957982|gb|ABM14987.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 399

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 43/261 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-------- 250
            G+TE   G D + IT+  ++  D  Y ++G K ++S  + S+  ++L + E        
Sbjct: 131 FGVTEPGAGLDTSRITTFAKREGDK-YRVNGRKVWISKALESEKILLLTRTESPDDLEKR 189

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFG 296
           G      +   L D   N +  + ++ K+G  + ++ E+              E    F 
Sbjct: 190 GAKKTDGMTLFLTDLDRNHVDIRPIR-KMGRNAVSSNEVFIDDLMVPVEHRVGEEGKGFK 248

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           ++L  LN         ++LI    A  ++   RV+L +A+ Y   RHV    +     ++
Sbjct: 249 YILDGLNPE-------RMLI----AAEALGIGRVALEKAVKYGNERHVFNRPIGMNQGLQ 297

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD    + AA  +  +    +D  K    EA  A       KY C          A+
Sbjct: 298 FPLADSLARLDAAELVLRKATWLYDNGKPCGREANTA-------KYLCADAGFGAADRAL 350

Query: 417 ECIGGSGYIEERSIARHYRES 437
           +  GG GY EE  ++R++RES
Sbjct: 351 QLHGGMGYSEEYHVSRYFRES 371


>gi|284046148|ref|YP_003396488.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950369|gb|ADB53113.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 124/302 (41%), Gaps = 49/302 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +  + + + PK  + E+ P                L+E   G+D   + ++  + 
Sbjct: 102 IKLFGSEELQQRFLPKCATGEWTPA-------------FALSEPEAGSDPGGMITKAVRD 148

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQR 274
            D  + ++G K W  +  ++D +I+ A  +   G       F+V R     + +G     
Sbjct: 149 GDE-WVINGTKNWISNLGIADFYIVFAVTDPTAGHSRGISAFVVER-----TRDGFSVGN 202

Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
            + K+G R + T +  F +       L+G++N      + M + L  LD + + V+   +
Sbjct: 203 HEKKLGIRGSPTGQPIFDDVRIPAENLIGEVN------KGMHVALGTLDYSRLGVAAQAL 256

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384
            +A+     A  YAR R   G  +     ++  +AD+    AA   L ++     D    
Sbjct: 257 GIAQGATDYAAAYARERRQFGKPINAFQGIQFKLADMETQTAAGRELLYQACAKADRGDV 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R + +A A++       +    A  V  EA++ +GG GY+ E  + R  R++    I  
Sbjct: 317 DRGKYSAMAKL-------YNSDNAMRVTVEAVQVLGGYGYVNEYPVERMLRDAKITQIYE 369

Query: 445 GS 446
           G+
Sbjct: 370 GT 371


>gi|19704867|ref|NP_602362.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328947|ref|ZP_06871455.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19712752|gb|AAL93661.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296153936|gb|EFG94746.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 378

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 28/267 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPR 260
           LTE   G+D +A  +   K  D  Y L+G K F+++    +F  +  + +   G   +  
Sbjct: 123 LTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFITNGAVASFYCITAITDKEKGLKGISM 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKI- 314
              +    GL     ++K+G R+        SNT   +L D  +    +     E   I 
Sbjct: 182 FFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVVLEDCRIPASALVGKEGEGFAIA 233

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD A   +  + V +A     EAI Y + R   G  +I    ++  IAD+ +    A
Sbjct: 234 MKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKNQALQFKIADMEIKTETA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +        D      +E+A       I K +   +A  V +EA++  GG GY  E  
Sbjct: 294 RQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVSSEAIQMFGGYGYSREYP 346

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
           + +  R+S    I  G+     + + N
Sbjct: 347 VEKLIRDSKIFQIFEGTNEIQRIVIAN 373


>gi|84501928|ref|ZP_01000086.1| acyl-CoA dehydrogenase (acd-11) [Oceanicola batsensis HTCC2597]
 gi|84389923|gb|EAQ02557.1| acyl-CoA dehydrogenase (acd-11) [Oceanicola batsensis HTCC2597]
          Length = 380

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 16/252 (6%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D  A+T+  +   +G + L+G K F +    +D  ++ A+     G   +  +
Sbjct: 122 TEPEAGSDATAVTTSLRPDGNG-FVLNGGKIFTTFGDRADYLLVYARFCDSKGARGIGTV 180

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-----FLLGDLNVSTGPVEDMKIL- 315
           L +    G+    L+ K+G R     E+ F +           G  + S+G V  + +  
Sbjct: 181 LVERDSPGVTVNILEQKMGARGCNECEIHFDDVRVPADNIVTEGLADASSGFVRPLAVYN 240

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +   I+++     +   A  Y + R   G  L D   ++  ++D+ + I AA AL +
Sbjct: 241 ATRVGMGILALGVAEGAFDLARDYMKTRRQFGKALSDMQGLQWMMSDMTVQIEAARALCY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              +  D  +           ++ I K    +MA  V  +AM+  GG GY     + R  
Sbjct: 301 TALSLIDRGQPDP-------TLSSIAKVQATEMAQRVTHDAMQMFGGYGYFGSLPLERMV 353

Query: 435 RESPANSILLGS 446
           R+    +I  G+
Sbjct: 354 RDVRMLTITGGT 365


>gi|324999940|ref|ZP_08121052.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 393

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 109/277 (39%), Gaps = 38/277 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGR 252
           +  G+TE   GTD   I+++     DG + ++G K W   S   D  ++LA+     EG 
Sbjct: 125 VTFGVTEPDAGTDTTRISTRATPTDDG-WVINGTKVWNSGSLRGDKILLLARTSEPAEGE 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFL 298
                +   L D + + +  + +  KIG  + AT E+              E    F  L
Sbjct: 184 RRGNGLTLFLTDLNRDTVDIREIP-KIGRNAVATAEVFFHDHQVTPAEVVGEVGQGFYHL 242

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  LN         ++LI  ++  +     R S+  A  YA  R V G  +     ++  
Sbjct: 243 LHSLN-------GERLLISAEAIGLG----RWSIEAATRYAEERVVFGRQIGKNQAVQHP 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A   L + AA  + ++  + + E    +        +A   KY   +       +AM+ 
Sbjct: 292 LAASYLRLLAAAEVVYKAVDEYQEKGGGA-----VGTLANAAKYLSSEAGFGAADDAMQV 346

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            GG  Y  E  I R++ ES    +     N MVL+ +
Sbjct: 347 FGGYSYAREYHIGRYWIESRLQRV-APINNQMVLNYI 382


>gi|289740975|gb|ADD19235.1| glutaryl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 420

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D   + ++ +  ++   + L+G K W  SSP++D  I+ A+ E G+V  F
Sbjct: 159 FGLTEPNHGSDPGGMETRAKYDNESKCFILNGSKSWITSSPIADVLIIWAKGEDGKVRGF 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
           LV R   + S  GL   +++ K   R++ T  +        L+ DL+V   P E++    
Sbjct: 219 LVDR---EQSKKGLSTPKIEGKFSLRASITGMI--------LMDDLHV---PEENLLPNV 264

Query: 313 ----KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIA 363
                    L++A   ++   +  AEA       Y   R   G  L    ++++ +AD +
Sbjct: 265 VGFVGPFTCLNNARYGIAWGALGAAEACVEIARQYVLDRKQFGRPLAANQLIQKKLADAS 324

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            DIA       ++     E K  + E      M  + K      A  +     + +GG+G
Sbjct: 325 TDIALGLQACLQVGR-LKEKKLHTPE------MISMIKRNNAGKALEIARVMRDVLGGNG 377

Query: 424 YIEERSIARH 433
             +E  I RH
Sbjct: 378 ISDEYHIIRH 387


>gi|282863152|ref|ZP_06272212.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282562134|gb|EFB67676.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 408

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMATA 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A +V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 333 GKQ------FTSAEGSMSKLFASETAKSVTAQAVQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|262204337|ref|YP_003275545.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087684|gb|ACY23652.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 403

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 38/267 (14%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
            P+    V     +TE     G+D  A+ +   K+ DG + ++G K F++ +  +  FI+
Sbjct: 121 GPLATGEVRSAFAMTEPSPGAGSDPNALRTMATKV-DGGWKINGEKRFITGADGAGFFII 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
           +A+  G  G       FL P      +     +   K+ IG       E++F + F    
Sbjct: 180 MARTAGAPGDRGGATMFLAPAQTPGITVKRHIHTTDKSMIGGH----CEVDFVDVFVPDE 235

Query: 297 FLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            +LG+++       V  GP     ++ +L +A             A+ Y   R   GG L
Sbjct: 236 DILGEVDEGYRYAQVRLGPARMTHVMRWLGAATRCHD-------VAVEYVATREGFGGRL 288

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D  ++++ +AD  +D+AA  AL  +     D+    S E +       I K +  +   
Sbjct: 289 GDLGMIQQMVADNEIDLAATRALLLKACYELDQGNHASNETS-------IAKTFAAEAYS 341

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRE 436
            +   +++  GG G  E+  +AR  +E
Sbjct: 342 RIADRSIQMCGGLGVSEDMPLARLQQE 368


>gi|332261787|ref|XP_003279948.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 588

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 147 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 206

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 207 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGDG 259

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 260 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 319

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 320 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 372

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 373 YTRDYPYERILRDT 386


>gi|308178599|ref|YP_003918005.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307746062|emb|CBT77034.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 378

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGR----VGCF 256
           LTE   G+D AA++++ ++  D  Y LSG K F+S   S A +I++A+        +  F
Sbjct: 123 LTEPGVGSDAAALSTRARRDGD-EYVLSGVKQFISGAGSSALYIVMARTADTGSRGISAF 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
           LVP     G   GL +   + K+G ++  T ++         G LLG+     G    M+
Sbjct: 182 LVP-----GDAEGLSFGPNEKKMGWKAQPTRQVIMEGVRIPAGNLLGE--EGQGFSMAMQ 234

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAAT 370
            L    L+    S+ G + +L ++  Y + R   GG L  Q  +   +A++ +++ AA +
Sbjct: 235 ALNGGRLNIGACSLGGGQSALEKSALYLKERQAFGGPLTRQEALVFKLAEMDMELEAARS 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L    A    ++  R    A A+ MA    +            A++  GG GY+ +  +
Sbjct: 295 LLRRAAAALDAKSPDRVRLCAMAKKMATDAGFNAAN-------SAIQLHGGYGYLADYGM 347

Query: 431 ARHYRESPANSILLGSGNAMVLDV 454
            +  R+   + IL G+   M L V
Sbjct: 348 EKIARDLRVHQILEGTNEIMSLIV 371


>gi|288922857|ref|ZP_06417021.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345783|gb|EFC80148.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 166

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA++R   G  + D   +   +A++A  + A   +    A   D  +    EA  A+
Sbjct: 42  AIAYAQQRRTFGHQIADHQAIAFKLAEMATKVEAGHLMMVNAARKKDSGQRNDVEAGMAK 101

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +A     +C +    V  E+    GG GY +E  I R YRE+P   +L+G G + V
Sbjct: 102 FLAS---EYCHE----VTTESFRIHGGYGYSKEYEIERLYREAP--FMLIGEGTSEV 149


>gi|163744850|ref|ZP_02152210.1| isobutyryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161381668|gb|EDQ06077.1| isobutyryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 560

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 43/302 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P+I S E  PT                TE   G
Sbjct: 256 GSLGTRSEIAAELILCGGTDAQKEKWLPRIASAETLPTAV-------------FTEPNTG 302

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261
           +D+ ++ ++  K  D  Y ++G+K W   +  +    +LA+ +        +  FL  + 
Sbjct: 303 SDLGSLRTRAVKDGDD-YKVTGNKTWITHAARTHVMTLLARTDSETTDHRGLSMFLAEKT 361

Query: 262 L-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL 315
             +D +P    G+    ++  +G R     EL F    GF +   N+  G       +++
Sbjct: 362 PGDDANPFPTPGMTGGEIE-VLGYRGMKEYELAFD---GFEVKGENLLGGEEGRGFKQLM 417

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +SA +  +   + +A++     + YA+ R   G  LID P +   +A +A+++  A 
Sbjct: 418 ETFESARIQTAARAIGVAQSALDISMQYAQDRKQFGKSLIDFPRVSGKLAMMAVELMIAR 477

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D  +    EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 478 QLTYYSAFEKDAGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYKI 530

Query: 431 AR 432
           +R
Sbjct: 531 SR 532


>gi|66499429|ref|XP_392111.2| PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 417

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 30/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252
           +TE   G+D+A I ++ +K  +  + ++G K W  +  +++ + +LA+            
Sbjct: 155 VTEPGAGSDVANIKTKAEKKGNE-WIINGTKMWITNGGVANWYFLLARTNPDPKAPTNKA 213

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V R  E     GL   R +  +G R++ T  + F +     + + NV     E  
Sbjct: 214 FTAFIVERESE-----GLTPGRKEINMGQRASDTRMITFEDV---RVPEENVLGKEGEGF 265

Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D    SV+   V LA     EA+ YA  R     I+     +   +AD+++ I
Sbjct: 266 KIAMKTFDKTRPSVAAGAVGLAQRALDEALKYATERKTFDTIIAGHQAIAFMLADMSIGI 325

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     RLA     A +   +      +A I K +   +A     +A++  GG+G+  
Sbjct: 326 ETA-----RLA-WMKAAWASDHQLPTTTFLASIAKCYGGDIANKCATDAVQIFGGAGFNT 379

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 380 EYPVEKLMRDAKIYQIYEGT 399


>gi|284990335|ref|YP_003408889.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
 gi|284063580|gb|ADB74518.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
          Length = 395

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 39/270 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
            GLTE   G+D   + +  ++  D  Y L+G K W  +  ++D  ++ A+ E G VG ++
Sbjct: 132 FGLTEPAHGSDAVGLETFVRRDGDS-YVLNGQKKWIGNGTIADHVLIWARGEDGAVGGYV 190

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED------ 311
           V +    G+P G   + +  K   R+    E+  S        D+ V   P E+      
Sbjct: 191 VDK----GTP-GYEARVMTGKTALRAVWQAEITLS--------DVRV---PAENRLANCH 234

Query: 312 --MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +   LD    +V+   + LA A     + +A RR   G  +    +++  +A +  
Sbjct: 235 SFKDVSQVLDRTRYTVAWRALGLATASYELALAHALRREQFGQPIAGYQLVQDKLARMLA 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I A   + +RL+   D  +  +        MA + K      A A++A+A + +GG G 
Sbjct: 295 EITAMQLMCWRLSKLADAGRMTA-------AMASLAKMNHAAKARAIVADARDILGGDGI 347

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454
           + +  +ARH+ +  A     G+ +   L V
Sbjct: 348 LIDHHVARHHADMEAVFTFEGTDSVQALIV 377


>gi|147903727|ref|NP_001087662.1| MGC81873 protein [Xenopus laevis]
 gi|51703486|gb|AAH81056.1| MGC81873 protein [Xenopus laevis]
          Length = 422

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+A + ++ +K  +  Y ++G K W  +   ++ + +LA+     +   G  
Sbjct: 161 VTEPGAGSDVAGLKTRAEKKGNE-YIINGQKMWITNGGKANWYFLLARTNPDPKVSAGKA 219

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               +++  SP G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 220 FTGFIVDANSP-GIQIGRKEMNMGQRC--------SDTRGIVFEDVRVPAENVLIGEGAG 270

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G ++ +   +   +A++A+ 
Sbjct: 271 FKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYAVERKTFGKLIAEHQAVSFLLAEMAMK 330

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  V ++A++  GG+G+ 
Sbjct: 331 VELARLAYQRAAWEIDCGRRNT-------YYASIAKAYAGDIANQVASDAVQVFGGNGFN 383

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + +  R++    I  G+
Sbjct: 384 SDYPVEKLMRDAKIYQIYEGT 404


>gi|62289010|ref|YP_220803.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|161618010|ref|YP_001591897.1| isovaleryl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|189023285|ref|YP_001934053.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus S19]
 gi|260546302|ref|ZP_05822042.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260567332|ref|ZP_05837802.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755876|ref|ZP_05868224.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760825|ref|ZP_05873168.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260884900|ref|ZP_05896514.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261221250|ref|ZP_05935531.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261314761|ref|ZP_05953958.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261316680|ref|ZP_05955877.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261324141|ref|ZP_05963338.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261751345|ref|ZP_05995054.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261755910|ref|ZP_05999619.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261759135|ref|ZP_06002844.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265987750|ref|ZP_06100307.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265993966|ref|ZP_06106523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265997211|ref|ZP_06109768.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|294851427|ref|ZP_06792100.1| isovaleryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|297247429|ref|ZP_06931147.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62195142|gb|AAX73442.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|161334821|gb|ABX61126.1| Isovaleryl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|189018857|gb|ACD71579.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus S19]
 gi|260096409|gb|EEW80285.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260156850|gb|EEW91930.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260671257|gb|EEX58078.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260675984|gb|EEX62805.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260874428|gb|EEX81497.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260919834|gb|EEX86487.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261295903|gb|EEX99399.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261300121|gb|EEY03618.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261303787|gb|EEY07284.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261739119|gb|EEY27115.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261741098|gb|EEY29024.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261745663|gb|EEY33589.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|262551679|gb|EEZ07669.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|262764947|gb|EEZ10868.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|264659947|gb|EEZ30208.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294820016|gb|EFG37015.1| isovaleryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|297174598|gb|EFH33945.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 392

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERKQ-----FDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|121609371|ref|YP_997178.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554011|gb|ABM58160.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 385

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 67/321 (20%), Positives = 133/321 (41%), Gaps = 24/321 (7%)

Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y +A  EA G++ +  V+ A+ V   M TP +   +      RE+     AP     V +
Sbjct: 66  YAVAAGEAMGYVRAQGVSMAAGVQTDMATPALAA-FGSDELKREF----LAPAIAGDVVV 120

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGR 252
            +G++E+  G+D+A++ +  ++   G Y +SG K W  +   +D   +L       +   
Sbjct: 121 CIGVSEQGAGSDVASLQTHARR-DGGDYLISGAKMWITNGTQADWICLLCNTSDGPMHKN 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVED 311
               +VP   +     G+  Q+++ K G   + T ++ F      +   +     G +  
Sbjct: 180 KSLIIVPLKDKGQRAKGVAVQKIR-KFGMWCSDTAQIFFDEVRVPVRHRIGAEGMGFIYQ 238

Query: 312 MKILIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           MK          +     + L  E   Y R+R   G  L+D   ++  +A++  ++ A  
Sbjct: 239 MKQFQEERLGAAARRLAAIQLIDETADYLRQRIAFGKPLLDNQFIQFKLAELKTELEALR 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +    ++       E A+ A++ A        +++  +    M+  GG GY  +  +
Sbjct: 299 GLVYMATQTYVSGGDVVELASMAKLKAG-------RLSREIAQWCMQFQGGMGYTWDNPV 351

Query: 431 ARHYRESPANSILLGSGNAMV 451
           +R YR+    SI  G+   M+
Sbjct: 352 SRAYRDFRLCSIGGGADEVMM 372


>gi|331694912|ref|YP_004331151.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326949601|gb|AEA23298.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 397

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 31/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR------V 253
           ++E   G+D+AAI ++  +  D  Y + G K W  +   S+   +L +  EG+      +
Sbjct: 129 MSEPDLGSDVAAIKTKAVRDGDD-YVIDGAKMWLTNGGTSNLIALLVRTDEGKPKPHQNL 187

Query: 254 GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP---- 308
             FLV +    G    GL      +K+G +   T E  F          L   TG     
Sbjct: 188 TAFLVEKPTGYGEVAPGLTIPGKIDKMGYKGVDTTEAVFDGYRIPASAILGGETGKGFSQ 247

Query: 309 ----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               VE  ++ +   +  +S+    +    A+ YA++R   G  + +   +   +A++  
Sbjct: 248 MMDGVEVGRVNVAARACGISIRAFEL----AVEYAQQRSTFGKPIAEHQAIAFKLAEMGT 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D       EA  A+++A     +C +    V  EA    GG GY
Sbjct: 304 KVEAAHHMMVNAARLKDAGTRNDVEAGMAKLIA---SEYCAE----VTQEAFRIHGGYGY 356

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            +E  I R  RE+P   +L+G G + +
Sbjct: 357 SKEYEIERLMREAP--FLLIGEGTSEI 381


>gi|322711176|gb|EFZ02750.1| hypothetical protein MAA_02332 [Metarhizium anisopliae ARSEF 23]
          Length = 399

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 31/257 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   G +   +++  QK +DG Y ++G K W   + ++   I+LA+   R      
Sbjct: 125 FGVTEPNAGLNTLGLSTTAQKTADG-YSITGQKIWITCAQVASKMILLARTTPRDQAKKP 183

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G  L    L+   P GL  +R+K K+G R+    E+ F N   + +    V       
Sbjct: 184 SEGLSLFCIDLDRARP-GLELRRIK-KMGGRAVDANEVFFDN---YQIPASAVIGQEGRG 238

Query: 312 MKILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360
            K++++ +++    ++G  +     +L++A  YAR R     ++ ++P+     +   +A
Sbjct: 239 FKMILHGMNAERCLLAGEALGLGYAALSKAASYARER-----VVFERPIGMNQGVAHPLA 293

Query: 361 DIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D  + + AA   ++  A  +D++    S +     + A   KY   + A      A+   
Sbjct: 294 DAYVKLEAAKLATYHAARLYDQSTHDPSIKQDAVGVAANSAKYVAAEAAFTACERAVLAH 353

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY  E  + R +RE
Sbjct: 354 GGMGYAAEYDVERWFRE 370


>gi|301065005|ref|ZP_07205350.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300440854|gb|EFK05274.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 395

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 106/281 (37%), Gaps = 49/281 (17%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           PM        + +TEK  G+D   I    +K   G Y  +G K F+S S +++ + +LA 
Sbjct: 126 PMMAEGAFGAIAMTEKSAGSDAGGIGLMARKNGAG-YLFNGEKIFISNSGLAEIYTVLAN 184

Query: 249 VEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296
            +G  G    PR     ++E  +PN    ++L  K G +   T  L F        N  G
Sbjct: 185 TKGVKG----PRSLSLFIVESSTPN-FTVRKLPEKDGLKILPTGRLIFEDAPVPGENLVG 239

Query: 297 ----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347
                L+G +NV             +D   + ++G+   LA     E  HY +RR     
Sbjct: 240 DEGRGLIGSVNV-------------IDRGKIHIAGICCGLAYRIFREVFHYVQRREQFDH 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L     +   I+D+   + AA  L F                 Y  + +   K +  +M
Sbjct: 287 PLTQSQDISFQISDMFTKMTAARGLCFHALKQIG--------TPYYGLSSAQAKLFASQM 338

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                + A   +GG GY +   + +   ++     L G+ N
Sbjct: 339 VMETASRAQILMGGRGYFKNDLVNQLSSDARGMEYLEGTSN 379


>gi|256827304|ref|YP_003151263.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
 gi|256583447|gb|ACU94581.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 29/265 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------GR 252
           L ++E   G+D  ++T   +K +DG Y LSG K W     +    I++A+ E      G 
Sbjct: 123 LSISEPGAGSDNRSMTCVTKKQADGTYLLSGQKTWVTMGAVLPYTIVVAKDEDPSHDNGD 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  +LV       S   L      +KIG +     E+ F +    L  D+ +       M
Sbjct: 183 MSLWLVKMDTPGVSTAAL------HKIGQQCIPFCEVYFDDV--VLTEDMRMGEAGKGFM 234

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            ++   +     +   ++ LA+     A  YA +R   G  +  Q +++  + D+ + + 
Sbjct: 235 MLMKNFEVERAYIVAEQLGLAQAALSDAAQYANQRIAFGKPIFKQEMIQELLTDMEIKVQ 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                 +++    D  +    E+A       + K + CK    V   A++   G GY  E
Sbjct: 295 TTRQFLYKVLWMMDNGEPVQLESA-------LLKRYGCKECFEVTDMALQIYAGLGYTTE 347

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             I R + ++  N  + G G   ++
Sbjct: 348 VRIGRLWADTRGN--MFGGGTHEIM 370


>gi|226362528|ref|YP_002780306.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241013|dbj|BAH51361.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 114/275 (41%), Gaps = 53/275 (19%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIML 246
           AP+   S  +   LTE  GGTD+A +     K SD G + L+G K ++S P  +   I+L
Sbjct: 115 APLLDGSERVAFALTEPDGGTDVARVMRTRAKQSDGGRWVLNGAKTWISGPQHARNLIVL 174

Query: 247 AQ--------VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           A+        ++G +  F+VP         G+  + L +     S  T E+ F N     
Sbjct: 175 ARTSTPESSPIDG-ITMFVVPT-----DAPGITVREL-DTFAIHSLDTCEVTFDNV---- 223

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGM----------------RVSLAEAIHYARRR 342
                     ++   +L ++D     V G                 R +L  A+ Y R+R
Sbjct: 224 ---------EIDASAVLGHVDQGFRQVLGTLNGERLNAAAAALGIARGALEAAVDYGRQR 274

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            V G  +      +  + D A+ I +A AL  + A    EA +  +    A I++ + K 
Sbjct: 275 QVFGRPVGSFQAGQHRLVDGAIAIESARALMLQAA----EATATGQR---ADILSAMAKV 327

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                A AV    M  +GGSG+ +E  + R +R++
Sbjct: 328 AASDAAVAVTDAGMRLMGGSGFSKEYPMERLFRDA 362


>gi|161353801|ref|YP_517171.2| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 111/280 (39%), Gaps = 44/280 (15%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           +K   A  LG+TE   G+D +A+ +   + +  IY ++ HK F++      +++    E 
Sbjct: 113 KKGLCAFSLGITEPGAGSDDSAMMATATRRNGKIY-INAHKTFITEAKQRPYMLCLTREL 171

Query: 251 ----------------GRVGCFLVP--RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
                            + G  ++P  ++  + +P    Y                  F 
Sbjct: 172 NAPNPHKAISMWWVDMSKPGVKVMPWEKIGGNTAPTYEVYLEDVELEEEDLVGVEGEGFM 231

Query: 293 NTFG-FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           N  G F +  + ++ G      +L + ++A            +A  YA +R   G  +  
Sbjct: 232 NLMGNFEVERIQIAAG------VLGWAEAA----------FEDAAVYANQRVQFGKPIGS 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  I ++A+ I     L ++       A    E     +I +  TKY+C + A  V
Sbjct: 276 FQLIQEKIVEMAIKIENMRNLVYK-------ACWERENGMSLQISSATTKYYCVRAANQV 328

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           I +AM+ +GG GY ++  I+R +R+        G+   M+
Sbjct: 329 IDDAMQIMGGIGYTKDHRISRLWRDVRNTRFGGGTDEIMI 368


>gi|15839595|ref|NP_334632.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148821408|ref|YP_001286162.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis F11]
 gi|253797137|ref|YP_003030138.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 1435]
 gi|254366664|ref|ZP_04982708.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|289747982|ref|ZP_06507360.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 02_1987]
 gi|308231495|ref|ZP_07412642.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu001]
 gi|308369335|ref|ZP_07417385.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu002]
 gi|308370346|ref|ZP_07421158.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu003]
 gi|308371620|ref|ZP_07425527.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu004]
 gi|308372837|ref|ZP_07430062.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu005]
 gi|308373917|ref|ZP_07434104.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu006]
 gi|308375101|ref|ZP_07442680.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu007]
 gi|308376338|ref|ZP_07438467.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu008]
 gi|308378580|ref|ZP_07483068.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu009]
 gi|308379725|ref|ZP_07487299.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu010]
 gi|308380927|ref|ZP_07491518.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu011]
 gi|13879711|gb|AAK44446.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|134152176|gb|EBA44221.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148719935|gb|ABR04560.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis F11]
 gi|253318640|gb|ACT23243.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 1435]
 gi|289688510|gb|EFD55998.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 02_1987]
 gi|308217138|gb|EFO76537.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu001]
 gi|308327976|gb|EFP16827.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu002]
 gi|308332356|gb|EFP21207.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu003]
 gi|308336108|gb|EFP24959.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu004]
 gi|308339739|gb|EFP28590.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu005]
 gi|308343744|gb|EFP32595.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu006]
 gi|308347465|gb|EFP36316.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu007]
 gi|308351515|gb|EFP40366.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu008]
 gi|308352091|gb|EFP40942.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu009]
 gi|308356041|gb|EFP44892.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu010]
 gi|308359997|gb|EFP48848.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu011]
 gi|323717204|gb|EGB26413.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis CDC1551A]
 gi|328456924|gb|AEB02347.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 4207]
          Length = 373

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 38/271 (14%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236
           R Y P    PM    +   + LTE  GG+D+  +++     G + S G+       W  +
Sbjct: 123 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 178

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  S  F +L + +        PR       L+E G   GL   R   K+G +   + EL
Sbjct: 179 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 232

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            F N       +LG   +  G  + MK L    I + +  + V+    +L +++ YA++R
Sbjct: 233 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVA--TAALEDSLAYAQQR 289

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     +   +AD+A  + AA  L+   A  +D  +    EA  A++ A     
Sbjct: 290 ESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA----- 344

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              ++A  +   A+   GG GY  E  + R 
Sbjct: 345 --SEVAMEIALNAVRIHGGYGYSTEYDVERR 373


>gi|11095222|gb|AAG29788.1|AF235050_11 acyl-CoA dehydrogenase [Streptomyces rishiriensis]
          Length = 373

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 17/197 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG----- 254
           +TE   G+D++ +T+    ++DG  Y L+G K F+S +P++D FI  A      G     
Sbjct: 119 MTEDDAGSDLSRLTTT--AVADGDSYVLNGRKSFVSNAPLADVFITYAATAPSAGYLGMS 176

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            F VPR L      GL    L  K+G    A  ++EF++      +LLG  N      + 
Sbjct: 177 AFAVPRTLP-----GLQVGSLLAKMGLNGCAAAQVEFTDCKVPGRYLLGPENQGNSVFQR 231

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                      + +  M   LA+ + +AR R   G  + +   +   +A + L +  +  
Sbjct: 232 SMTWERACLPAIYLGAMEGQLAQCVDHARSRKQFGRSIGNFQAISHRLATMKLRLETSRL 291

Query: 372 LSFRLANSFDEAKSRSE 388
           L +R     D+ +   E
Sbjct: 292 LLYRACWYLDQGRPAVE 308


>gi|261205638|ref|XP_002627556.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592615|gb|EEQ75196.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 435

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 119/300 (39%), Gaps = 35/300 (11%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     + +  +   LG+TE   G+D+A I +   +  +        KW  +   +D
Sbjct: 142 EYLPK----ISRGEIRFCLGITEPDAGSDVANIRTTAIRRGNKYIVNGAKKWITNGIWAD 197

Query: 242 AFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSN 293
                 +   EGR G  L   L+   +  G+  + ++N   N S +T      VE+   N
Sbjct: 198 YCTAAVRTGGEGRRGISL---LIIPLAAKGVTRRIMENSGVNASGSTFIEFDDVEVPVEN 254

Query: 294 TFG-------FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             G       +++ + N              L  AI  +   RV + +A +YA  R   G
Sbjct: 255 LIGTENDGFRYIMSNFNPER-----------LGLAISCIRLSRVCVEDAYNYATNRETFG 303

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI   +++   + +   I    A   +LA +   A    +E     + A + K    +
Sbjct: 304 QPLITNQIIRAKFSKLGRLIEPCQAFLEQLAYTIHVATKNGQEVNVGGMTA-LLKVMSTR 362

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI-LLGSGNAMVLDVLNLLEKGTNLF 465
               V  EA + +GG+GY +    AR  + S    + ++G G+  +L  L + E+  +L+
Sbjct: 363 CLEKVCREAQQVLGGAGYNKSGRGARIEQISRDVRVYVVGGGSEEILSDLAVREEIKSLY 422


>gi|291295217|ref|YP_003506615.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470176|gb|ADD27595.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 397

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 22/266 (8%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           WA   +  E       P   T   +G  GLTE  GG+D  A      +   G Y L+G K
Sbjct: 105 WA---YGSEEQKREYLPKLATGEYVGCFGLTEADGGSDPDANMKTRARRDGGDYVLNGSK 161

Query: 233 -WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            W  +  ++   I+ A+  EG V  F+VP         G    ++++K   R++ T EL 
Sbjct: 162 MWITNGNLAHIAIIWAKDDEGVVRGFIVPT-----DTKGFRANKIQHKASLRASVTSELV 216

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
             +       +L  +    GP+  +    +   A  ++  +     EA+ +AR R   G 
Sbjct: 217 LEDVRVPASAMLPGVKGLKGPLSCLTQARF-GIAWGALGALEAVYTEALEFARSRSTFGA 275

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +  + +++  +  +A D      L++RLA   D    +  + +       + K    + 
Sbjct: 276 PIASRQLVQEKLVRMAADHTKGLLLAWRLAQLKDAGTLKPAQVS-------LGKRDNVRA 328

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A      A E +GGSG   E    RH
Sbjct: 329 ALNGARAAREILGGSGITLEYHSIRH 354


>gi|225626568|ref|ZP_03784607.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|225618225|gb|EEH15268.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
          Length = 397

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 118 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 162

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 163 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 222

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 223 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 278

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 279 YVHERKQ-----FDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 333

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 334 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 384

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 385 RML----IGRELFQE 395


>gi|222874280|gb|EEF11411.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++A A+     A  TAL      S  +   R E      ++ P+ K +    A     E 
Sbjct: 86  QKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFTSTNEG 145

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470
           M+  GG GYI E  + ++ R++  N I  G+     LD+L    L + G  L  F ++  
Sbjct: 146 MQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQ 205

Query: 471 TLEQDLGSS 479
           T  ++ G+S
Sbjct: 206 TFVEEEGTS 214


>gi|145589569|ref|YP_001156166.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047975|gb|ABP34602.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 389

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           + +TE   GTD   + +   K  D  Y ++G K W      SD  I+LA+          
Sbjct: 124 MAVTEPSTGTDTTKLKTTAVKKGDN-YVVNGQKVWISRIQHSDLMILLARTTPISEVQRK 182

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            EG +  F+V   L+D    G+  + + N + + +N   E+ F N        L +   P
Sbjct: 183 SEG-MSIFIVN--LKDAIGKGMEVRPIANMVNHETN---EVFFDN--------LEI---P 225

Query: 309 VEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA- 358
           VE++          IL  L++    ++   +  A       RR+ +  ++ D+P+ K   
Sbjct: 226 VENLIGTEGQGFKYILDGLNAERTLIAAECIGDAYWFIDRARRYANDRVVFDRPIGKNQG 285

Query: 359 ----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
               IAD  ++  AA  + F+    FD  +    EA  A+ +A    +    +       
Sbjct: 286 IQFPIADSYIETEAANLMRFKACELFDNHQPCGPEANMAKFLAAKASWEAANV------- 338

Query: 415 AMECIGGSGYIEERSIARHYRES 437
            ++  GG G+  E  + R +RE+
Sbjct: 339 CLQTHGGFGFANEYDVERKFRET 361


>gi|308488991|ref|XP_003106689.1| CRE-ACDH-7 protein [Caenorhabditis remanei]
 gi|308253343|gb|EFO97295.1| CRE-ACDH-7 protein [Caenorhabditis remanei]
          Length = 455

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 82/381 (21%), Positives = 157/381 (41%), Gaps = 50/381 (13%)

Query: 95  DKVEFHPAWHALLRRSIHDGL--HCSIWDRSFE---PVVRKQAHKIRAARLYLMAQLEAG 149
           D+ EF     A +R+ + D +    + +DR+ E   P+++K AH    A+ YL+A +   
Sbjct: 74  DQTEFR----ANVRKFVADEVIPVAAEYDRTMEYPWPIIKK-AH----AQGYLIADIPEA 124

Query: 150 H------LMSPSVTSASMV---ALMTTPRVHKDWA--PKIFSREYDPTNK--APMQKTSV 196
           +      ++S  + S  M    + + T  +  D A  P I     D   +    M +   
Sbjct: 125 YGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMVENPF 184

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR--- 252
                +TE   G+D+A I ++ +K  D  Y L+G K W  ++  ++ F +LA+ +     
Sbjct: 185 VASYAVTEPGAGSDVAGIKTKCEKKGDE-YILNGSKMWITNAGHANWFFVLARSDPNPKT 243

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G      ++E  SP GL   R +  +G R + T  + F +     +   NV   P E 
Sbjct: 244 PAGKAFTAFVVEGDSP-GLTRGRKEINMGQRCSDTRGVTFEDV---RVPAANVVGAPGEG 299

Query: 312 MKILI-YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K+ +   D    +V+ +        L  A  Y+  R   G  + +   +   +A++A++
Sbjct: 300 FKVAMKTFDKTRPTVAALATGVTYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAIN 359

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              A  ++++     D  +  S  A+ A++ A                 A++  GG+G+ 
Sbjct: 360 AELARLMTYKSGAEVDAGRPGSYYASIAKLFA-------SDAVNQAATNAVQVFGGAGFN 412

Query: 426 EERSIARHYRESPANSILLGS 446
            E    +  R++    I  G+
Sbjct: 413 TEYPAEKLMRDAKIFQIYEGT 433


>gi|63100739|gb|AAH95385.1| Im:7141484 protein [Danio rerio]
          Length = 469

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I  +     DG  Y L+G K W  +   +D   + A+ E         
Sbjct: 190 LTEPGSGSDAASIQLRATLTEDGKHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKK 249

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R        G+   + ++K+G R + T E+ F +T      ++G+  V  G
Sbjct: 250 DKITAFIVERAF-----GGVTSGKPEDKLGIRGSNTTEITFEDTKVPIENVIGE--VGDG 302

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362
               M IL   ++   S+ G    + + +      YA  R      L +  +++   A +
Sbjct: 303 FKVAMNIL---NNGRFSMGGAGAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATM 359

Query: 363 ALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           AL++    ++++  A   D       S EAA  ++ +     W C      ++EA++ +G
Sbjct: 360 ALNVYVMESMAYLTAGMMDRPGLPDCSLEAAMVKVFSS-EGTWIC------VSEALQVLG 412

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G+ +     R+ R+     I  G+
Sbjct: 413 GLGFTKNYPYERYLRDCRILQIFEGT 438


>gi|51893615|ref|YP_076306.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857304|dbj|BAD41462.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 434

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 33/243 (13%)

Query: 216 SQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCY 272
           +  +++ DG + L+G K F + SP+   F++ A ++G      FLVPR        GL  
Sbjct: 177 TTARRLPDGSWVLTGRKNFTTLSPILRYFLVSATLDGTEEAAWFLVPR-----DAPGLHV 231

Query: 273 QRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +   + +G R+  + +L            L      + G  E    L+++ +  + V+  
Sbjct: 232 EETWDSLGMRATGSHDLRLEEVHLPADALLESARERTEGRTEGW--LLHVPAVYLGVA-- 287

Query: 329 RVSLAEAIHYA-RRRHVS-------GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +   A+ YA  RR V+          L D+P ++R I ++ L +  A  L   LA  +
Sbjct: 288 QAARDFAVKYAVERRTVNPPGHPEPTSRLADRPHVQRLIGEMDLALLPARHLLMGLARRW 347

Query: 381 DEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           DE    +SR  +A  A       K +  + A  V+ +AM   GG+       + R YR++
Sbjct: 348 DERPEWRSRMVDAVAA------CKPFVVETALRVVDQAMRVAGGASLARSLPLERFYRDA 401

Query: 438 PAN 440
            A 
Sbjct: 402 RAG 404


>gi|21222772|ref|NP_628551.1| acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|8894732|emb|CAB95893.1| putative acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 382

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 54/302 (17%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    ++W P             P+   +  +  G+TE   G++
Sbjct: 82  IVSPAICG-TVIARFGTEEQKREWLP-------------PLADGTRLMAFGITEPDAGSN 127

Query: 211 IAAITSQGQK-ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG-----CFLVPRLL 262
              IT+  ++  + G + L+G K F+S   ++DA +++ + E  R G      F+VPR  
Sbjct: 128 SHRITTTARRDAATGDWILTGRKVFVSGVDIADATLIVGRTEDARTGKLKPCLFIVPRDA 187

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-------FLLGDLNVSTGPVEDMKIL 315
           E        ++R    I    NA VE +F  T          L+GD +        +++ 
Sbjct: 188 E-------GFER--RPIDMELNA-VERQFELTLDDVRLPADALVGDEDAGL-----LQLF 232

Query: 316 IYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+     +A   +   R +L+ A+ YAR R V    +     +   +A   +D+  A 
Sbjct: 233 AGLNPERVMTAAFGIGMGRYALSRALDYARERTVWKTPIGAHQAIAHPLAQAHIDLELAR 292

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  + A+ +D         A     A + KY   +     + +A+  +GG+G   E  +
Sbjct: 293 LMMQKAAHLYDAGDDVGAGEA-----ANMAKYAAGEACVKAVDQAVHTLGGNGLTREYGL 347

Query: 431 AR 432
           AR
Sbjct: 348 AR 349


>gi|302557750|ref|ZP_07310092.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302475368|gb|EFL38461.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 374

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 18/251 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA++      +DG + LSG K W   +P +D + + A+     G   V  
Sbjct: 117 LTEPAAGSDAAALSLTATPAADG-WRLSGEKCWISHAPEADFYTVFARTTPGAGARGVTA 175

Query: 261 LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            L      GL    L     + IG  +   V +   +  G +     V+     D   L 
Sbjct: 176 FLVPADRPGLTGTALDMLSPHPIGALAFDAVPVTADDVLGEVDRGFRVAM----DTLNLF 231

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                  +V   + +L   + +  RR   GG L D   +   +A++AL   +A  + +  
Sbjct: 232 RPSVGAFAVGMAQAALDATLGHTARRDAFGGKLKDLQSVAHQVAEMALRTESARLMVYAA 291

Query: 377 ANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A ++DE A      +A A+++A  T  +       V+  A++  G         +   YR
Sbjct: 292 ATAYDEGAPDVPRRSAMAKLLATETAQY-------VVDRAVQLHGARALQRGHLLEHLYR 344

Query: 436 ESPANSILLGS 446
           E  A  I  G+
Sbjct: 345 EVRAPRIYEGA 355


>gi|239932669|ref|ZP_04689622.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291441027|ref|ZP_06580417.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343922|gb|EFE70878.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 408

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALEYAQTREQFGRPIIDNQGVAFQLADMRTRIDAARLLVWRASWMAVN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKEVTAQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|239611235|gb|EEQ88222.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327348761|gb|EGE77618.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 435

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 119/300 (39%), Gaps = 35/300 (11%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     + +  +   LG+TE   G+D+A I +   +  +        KW  +   +D
Sbjct: 142 EYLPK----ISRGEIRFCLGITEPDAGSDVANIRTTAIRRGNKYIVNGAKKWITNGIWAD 197

Query: 242 AFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSN 293
                 +   EGR G  L   L+   +  G+  + ++N   N S +T      VE+   N
Sbjct: 198 YCTAAVRTGGEGRRGISL---LIIPLAAKGVTRRIMENSGVNASGSTFIEFDDVEVPVEN 254

Query: 294 TFG-------FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             G       +++ + N              L  AI  +   RV + +A +YA  R   G
Sbjct: 255 LIGTENDGFRYIMSNFNPER-----------LGLAISCIRLSRVCVEDAYNYATNRETFG 303

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI   +++   + +   I    A   +LA +   A    +E     + A + K    +
Sbjct: 304 QPLITNQIIRAKFSKLGRLIEPCQAFLEQLAYTIHVATKNGQEVNVGGMTA-LLKVMSTR 362

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI-LLGSGNAMVLDVLNLLEKGTNLF 465
               V  EA + +GG+GY +    AR  + S    + ++G G+  +L  L + E+  +L+
Sbjct: 363 CLEKVCREAQQVLGGAGYNKSGRGARIEQISRDVRVYVVGGGSEEILSDLAVREEIKSLY 422


>gi|193645728|ref|XP_001943671.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Acyrthosiphon pisum]
 gi|328707014|ref|XP_001951793.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 417

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 119/266 (44%), Gaps = 34/266 (12%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----- 249
           A+G L ++E   G+D+ ++  + ++     Y L+G K W  + P +D  ++ A+      
Sbjct: 153 AVGALAMSEHGSGSDVVSMKLKAER-KGSHYILNGSKFWITNGPDADVLVVYARTNPDAK 211

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +  +  F++ +  E G   G   Q+L +K+G R + T EL F +       +LG+ N  
Sbjct: 212 KQHGITAFIIEKTYE-GFTTG---QKL-DKLGMRGSNTCELIFQDCKVPVENVLGEENKG 266

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
                   ++  LD   M +SG  V L +A       Y   R      + +  +++  IA
Sbjct: 267 V-----YVLMSGLDLERMVLSGGPVGLMQACADLTFDYVHSRQQFNTKIGEFQLIQAKIA 321

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   ++A     + ++ + D+    S++ A   + +        + A  +  + ++C+G
Sbjct: 322 DMYTTLSATRNYLYNISRACDKGHVCSKDCAGVILFSA-------ENAVKMALDTIQCLG 374

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G+GYI + +  R  R++    I  G+
Sbjct: 375 GNGYINDYASGRLLRDAKLYEIGAGT 400


>gi|296169345|ref|ZP_06850972.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895994|gb|EFG75683.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 312

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
           + W PK+ S E               IG + +TE   G+D+ ++ ++   + DG  Y ++
Sbjct: 110 RQWLPKMASGEL--------------IGAIAMTEAGTGSDLQSVKTRA--VLDGDEYVIT 153

Query: 230 GHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++   +D  +++A+ +   G   +  ++ +    G    R+ +KIG R   T E
Sbjct: 154 GSKTFITNGQQADLVVVVAKTDHTQGASGISLIVVEADRPGFRRGRVLSKIGQRGQDTSE 213

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343
           L F         LLGD     G  + M  L    L  A+ +V+ M ++L + I Y R+R 
Sbjct: 214 LFFDGVRVPKTHLLGDTE-GQGFFQLMTQLPQERLIVAVGAVAAMELALHQTIEYTRQRE 272

Query: 344 VSGGILIDQPVMKRAIADIALD 365
             G  +      K  +A+ A +
Sbjct: 273 AFGRTIFGFQNTKFTLAEAATE 294


>gi|294816099|ref|ZP_06774742.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294328698|gb|EFG10341.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 379

 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 39/303 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           AS +A+ TTP   + W P + S E             +   + ++E   G+++A I +  
Sbjct: 95  ASYLAVRTTPEQRRRWLPGLCSGE-------------LVAAIAISEPDAGSNVADIRTTA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            +  D  Y L+G K F+++  +   +++A      R G  L   ++E G+       RL+
Sbjct: 142 VRDGDH-YVLNGQKVFITNGENADLVLVAARTAPQRGGQGLSLFVVERGTAGFARGNRLE 200

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVS-----TG-PVEDMKILIYLDSAIMSVSG 327
            K+G  ++ T EL F         L+G  +       TG P E + I      A ++V+ 
Sbjct: 201 -KLGWNASDTCELFFDGCRVPADNLVGKEHAGMAYLMTGLPRERLSI------ATVAVAA 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L +A+ YAR+RH  G  +      +  +A +  ++  A           D   ++ 
Sbjct: 254 CEQMLEDALAYARQRHAFGQAIGSFQHNRFQLATMDTEVTIARVF-------LDHCVTQI 306

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                +   A   K+W  ++   +   A++  GG GY++E  I+R +  S   +I  G+ 
Sbjct: 307 NAGRLSAADAAKAKWWTTELQVEISNRAVQLHGGYGYLKESPISREWANSRVQTIYGGTT 366

Query: 448 NAM 450
             M
Sbjct: 367 EIM 369


>gi|148230460|ref|NP_001086632.1| medium-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|50416477|gb|AAH77210.1| Acadm-prov protein [Xenopus laevis]
          Length = 423

 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           +TE   G+D+A + ++ +K  +  Y ++G K W  +   ++ + +LA+         G  
Sbjct: 162 VTEPGAGSDVAGLKTRAEKKGNE-YIINGQKMWITNGGKANWYFLLARTNPDPKVPAGKA 220

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               +++  SP G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 221 FTGFIVDANSP-GIQIGRKELNMGQRC--------SDTRGIVFEDVRVPAENVLIGEGAG 271

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G ++ +   +   +A++A+ 
Sbjct: 272 FKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYAVERKTFGKLIAEHQAVSFLLAEMAMK 331

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  V ++A++  GG+G+ 
Sbjct: 332 VELARLAYQRAAWEIDLGRRNT-------YYASIAKAYAGDIANQVASDAVQVFGGNGFN 384

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + +  R++    I  G+
Sbjct: 385 SDYPVEKLMRDAKIYQIYEGT 405


>gi|89895238|ref|YP_518725.1| hypothetical protein DSY2492 [Desulfitobacterium hafniense Y51]
 gi|89334686|dbj|BAE84281.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 587

 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  +  ++     DG  Y L+G K F++ S  +D FI+ A++ G +   F+V
Sbjct: 149 LTEPGAGSDAMSAKTRADLSPDGKYYLLNGTKQFITNSAFADLFIVYAKIAGDKYTAFIV 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL-- 315
                D    GL     + K+G + ++T ++   N    +   L  +  G +    IL  
Sbjct: 209 -----DADSEGLSLGPEEKKMGIKGSSTRQVILDNVKVPVENILFEIGRGHIVAFNILNL 263

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L +  +  S   + LA A  YA  R   G  + +  ++K  +A +A+      ++ 
Sbjct: 264 GRYKLAANALGASKHALELAAA--YANERKQFGTPIANFGLIKEKLAKMAIKTYVMESML 321

Query: 374 FRLANSFD--------EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R     D          ++  + AA     YA +   + K +  +    V+ E ++  G
Sbjct: 322 YRTGGLLDGILHGLDTSGENGGQVAAKGIEEYA-LECSMNKIFATEAQGYVVDEGVQIHG 380

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E SI R YR++    I  G+
Sbjct: 381 GYGYCSEYSIERLYRDARIYRIFEGT 406


>gi|256786155|ref|ZP_05524586.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289770051|ref|ZP_06529429.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289700250|gb|EFD67679.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 382

 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 44/297 (14%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    ++W P             P+   +  +  G+TE   G++
Sbjct: 82  IVSPAI-CGTVIARFGTEEQKREWLP-------------PLADGTRLMAFGITEPDAGSN 127

Query: 211 IAAITSQGQK-ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG-----CFLVPRLL 262
              IT+  ++  + G + L+G K F+S   ++DA +++ + E  R G      F+VPR  
Sbjct: 128 SHRITTTARRDAATGDWILTGRKVFVSGVDIADATLIVGRTEDARTGKLKPCLFIVPRDA 187

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--FLLGDLNVSTGPVEDMKILIYLD- 319
           E        ++R    I    NA VE +F  T     L  D  V       +++   L+ 
Sbjct: 188 E-------GFER--RPIDMELNA-VERQFELTLDDVRLPADALVGDEDAGLLQLFAGLNP 237

Query: 320 ----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               +A   +   R +L+ A+ YAR R V    +     +   +A   +D+  A  +  +
Sbjct: 238 ERVMTAAFGIGMGRYALSRALDYARERTVWKTPIGAHQAIAHPLAQAHIDLELARLMMQK 297

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            A+ +D         A     A + KY   +     + +A+  +GG+G   E  +AR
Sbjct: 298 AAHLYDAGDDVGAGEA-----ANMAKYAAGEACVKAVDQAVHTLGGNGLTREYGLAR 349


>gi|121608755|ref|YP_996562.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553395|gb|ABM57544.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 563

 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 132/322 (40%), Gaps = 69/322 (21%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSS---PMSDAFI--ML 246
           L+E + G+ +  +T++   + DG           Y + GHK ++S+    +++  I  +L
Sbjct: 159 LSEPQAGSSLGDVTTR--AVPDGADFASDPLGPRYRIEGHKMWISAGEHELTENIIHLVL 216

Query: 247 AQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
           A++ G  G           F+VP+ L D      G  N +    L +K+G R  +   L 
Sbjct: 217 AKIPGADGQLLAGTKGLSLFIVPKKLVDTEGQLTGVRNDVALAGLNHKLGWRGTSNTLLN 276

Query: 291 F----------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           F          +   G+L+G     L+     + + +I + + + ++ ++G   SL  A 
Sbjct: 277 FGEGKYPVQGQAGAIGYLVGQAGRGLHCMFHMMNEARIGVGMAATMLGLAGYYASLDYAR 336

Query: 337 HYARRRHV------SGGILIDQ----PVMKRAIADIALDIAA-------ATALSFRLANS 379
           +  + R V      +GG L       PV     AD+   + A       A AL    A  
Sbjct: 337 NRPQGRPVPSQPDGAGGALAKDAAQPPVRIIEHADVKRMLLAQKSYGEGALALDLYCARL 396

Query: 380 FDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            D+ ++    AA        ++ PI K W  +      + A++  GG GY  +  + +++
Sbjct: 397 VDDMRTADAGAADEARMLLELLTPIAKSWPSEWCLEANSLAIQIHGGYGYTRDFPVEQYW 456

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++  N I  G+     +D+L 
Sbjct: 457 RDNRLNMIHEGTHGMQAMDLLG 478


>gi|268576739|ref|XP_002643349.1| Hypothetical protein CBG15946 [Caenorhabditis briggsae]
 gi|300680836|sp|A8XNF0|ACAD1_CAEBR RecName: Full=Probable medium-chain specific acyl-CoA dehydrogenase
           1, mitochondrial; Short=MCAD; Flags: Precursor
 gi|187026808|emb|CAP34381.1| hypothetical protein CBG_15946 [Caenorhabditis briggsae AF16]
          Length = 417

 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D+  + ++ +K  D  Y ++G K W      +  F +LA+ +       G+ 
Sbjct: 150 VTEPGAGSDVNGVKTKCEKKGDE-YIINGSKAWITGGGHAKWFFVLARSDSDPKAPAGKA 208

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG   G+   + +  +G R + T  + F +     +   NV   P    
Sbjct: 209 FTAFIV-----DGDTPGISRGKKEKNMGQRCSDTRTITFEDV---RVPAENVLGAPGAGF 260

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ +   D     V+   + LA     E+  YA +R   G  + +   ++  +AD+A+++
Sbjct: 261 KVAMGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGTEIANHQAVQFMLADMAVNL 320

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  ++++ A   D     S  A+ A+  A  T       A      A++  GG+G+  
Sbjct: 321 ELARLITYKSATDVDNKVRSSYNASIAKCFAADT-------ANQAATNAVQIFGGNGFNS 373

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 374 EYPVEKLMRDAKIYQIYEGT 393


>gi|296421750|ref|XP_002840427.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636643|emb|CAZ84618.1| unnamed protein product [Tuber melanosporum]
          Length = 411

 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 40/270 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKI-SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLV 258
           L+E   G+D  A+ ++  K  S G Y ++G K W  ++  S+ FI+ A +    G   + 
Sbjct: 166 LSEPASGSDAFALQTKAVKSESGGSYKITGQKMWITNAAESEVFIVFANIAPERGYKGIT 225

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
             ++E G P G    + + K+G ++++T  L F +     +   N+     E  K  I  
Sbjct: 226 AFVVEKGMP-GFNIAKKEKKLGIKASSTCVLTFDDV---EVPAENLLGKEGEGYKYAISL 281

Query: 318 LDSAIMSVSGMRVSLA-----EAIHYA--RRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           L+   + ++     LA      A+ Y    R H        +P +K             +
Sbjct: 282 LNEGRIGIAAQMTGLALGAWENAVKYECNSRSH--------KPGLK-------------S 320

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  R ++   E   R + A + R  A + K +  ++A  V   A+E +GG G++ E   
Sbjct: 321 RLRARCSSMPSE---RRKLAGFVR-EAAMAKLYASQVAQKVSGSAIEWMGGMGFVREGLA 376

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +++R+S   +I  G+ N  +  +  LL+K
Sbjct: 377 EKYWRDSKIGAIYEGTSNIQLQTIAKLLQK 406


>gi|258511194|ref|YP_003184628.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477920|gb|ACV58239.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 51/301 (16%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           A ++  RE+     APM      I + +TE   G+D+A I ++ ++  D  Y L+G K  
Sbjct: 101 ASEVVKREW----LAPMAAGERLIAIAITEPGAGSDVAQIAARAERDGD-RYVLTGEKSG 155

Query: 235 LS-SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           +S + ++DAF++ A+ +   G      FLVPR  E    +   Y+ L N    R +   E
Sbjct: 156 ISLASVADAFVVFAKTQMDAGARGVSAFLVPR--EAPGVSVHRYEDLGNVAIGRGSVFFE 213

Query: 289 L----------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                      E +  F  L+   ++S       ++LI L     ++     SL E   +
Sbjct: 214 RVEVPVDHRIGEENRAFYQLMRGFDLS-------RVLICLQCLGAAMQ----SLDETADH 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            RRR   G  L     +   + +    I      S+R     D     ++EA+       
Sbjct: 263 VRRRRAFGRPLAQFQGVAFPLVEYHTQIEMIRWFSYRALWLRDRGLPHTKEASM------ 316

Query: 399 ITKYWCCKMAPAVIAEAM-ECI---GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                C  + P V A+A+ ECI   G  GY ++  + +  R+     + +G G A    +
Sbjct: 317 -----CKWLGPQVAAQAIHECILLHGHYGYTKDLPLEQRLRD--VIGLEIGDGTAQTQKI 369

Query: 455 L 455
           +
Sbjct: 370 V 370


>gi|63101323|gb|AAH95591.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255
           +TE   G+D+A I  +  K  D  Y ++G K W  +   ++ + +LA+ +    C     
Sbjct: 163 VTEPGAGSDVAGIKIRAVKKGDD-YVINGQKMWITNGGKANWYFLLARTDSDPKCPASKA 221

Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     D    G+   R +  +G R + T  + F +    ++   NV  G     
Sbjct: 222 FTGFIV-----DADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKENVLIGEGAGF 273

Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +   D     V+     LA     EA  YA  R   G  + +   +   +A++A+ +
Sbjct: 274 KIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKV 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     R A   D  +  +         A I K +   +A    ++A++  GG+G+  
Sbjct: 334 ELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQIFGGNGFNS 386

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 387 EYPVEKLMRDAKIYQIYEGT 406


>gi|332261785|ref|XP_003279947.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 621

 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 180 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGDG 292

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 406 YTRDYPYERILRDT 419


>gi|113867541|ref|YP_726030.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526317|emb|CAJ92662.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 620

 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 57/312 (18%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           L+E + G+ ++ IT+    +G+      Y L G+K ++S+   +       ++LA++ G 
Sbjct: 163 LSEPQAGSSLSDITTRAEYEGESPLGAQYRLRGNKMWISAGEHELSENIVHLVLAKIPGP 222

Query: 253 VG----------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L  EDGS    N +    L +K+G R      L F      
Sbjct: 223 DGKLIPGVKGISLFIVPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKY 282

Query: 292 -----SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                +   G+L+G+    L      + + +I + L + ++  +G   +L  A +  + R
Sbjct: 283 RPGGKAGAIGYLVGEPHKGLACMFHMMNEARIGVGLGAVMLGYTGYLHALDYARNRPQGR 342

Query: 343 HVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            V  G          L++   ++R +      +    AL+   A   DE ++ +     A
Sbjct: 343 AVGPGGKDAASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCARLVDEEEAAAAAGDQA 402

Query: 394 R---------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     I+ PI K W  +        A++  GG GY  E ++ + YR++  N I  
Sbjct: 403 AHARLALLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHE 462

Query: 445 GSGNAMVLDVLN 456
           G+     LD+L 
Sbjct: 463 GTHGIQGLDLLG 474


>gi|219669670|ref|YP_002460105.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219539930|gb|ACL21669.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 584

 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D  +  ++     DG  Y L+G K F++ S  +D FI+ A++ G +   F+V
Sbjct: 146 LTEPGAGSDAMSAKTRADLSPDGKYYLLNGTKQFITNSAFADLFIVYAKIAGDKYTAFIV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL-- 315
                D    GL     + K+G + ++T ++   N    +   L  +  G +    IL  
Sbjct: 206 -----DADSEGLSLGPEEKKMGIKGSSTRQVILDNVKVPVENILFEIGRGHIVAFNILNL 260

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L +  +  S   + LA A  YA  R   G  + +  ++K  +A +A+      ++ 
Sbjct: 261 GRYKLAANALGASKHALELAAA--YANERKQFGTPIANFGLIKEKLAKMAIKTYVMESML 318

Query: 374 FRLANSFD--------EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +R     D          ++  + AA     YA +   + K +  +    V+ E ++  G
Sbjct: 319 YRTGGLLDGILHGLDTSGENGGQVAAKGIEEYA-LECSMNKIFATEAQGYVVDEGVQIHG 377

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G GY  E SI R YR++    I  G+
Sbjct: 378 GYGYCSEYSIERLYRDARIYRIFEGT 403


>gi|319950137|ref|ZP_08024073.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319436178|gb|EFV91362.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 385

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 38/307 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   VA   T    K W PK+ S E+                + +TE   G+D+  +
Sbjct: 98  STITPHYVANYATEEQKKAWLPKMCSGEW-------------ISAIAMTEPGAGSDLKGV 144

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +  ++  D  Y ++G K F+S+  S  F+++ A+ +   G   +     + S  G    
Sbjct: 145 RTTAKRDGDS-YVINGSKTFISNGGSADFVVVAAKTDPDAGHKGMALFAVEASTPGFERG 203

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN-------VSTGPVEDMKILIYLDSAIM 323
           R+  K+G     T EL F++       LLG          ++  P E  ++ I +D+  M
Sbjct: 204 RVLEKMGRHGADTAELFFNDMRVPAANLLGGEEGQGFYQLMNQLPRE--RLAIAVDALAM 261

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +      ++ E I Y + R   G     QPV+     +   ++A             D  
Sbjct: 262 A----EAAVVETIAYTKERQAFG-----QPVLD--FQNTRFELAHCKTQVMATRTFVDYC 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R        + A + K     M   V+   ++  GG GY+ E  I + +  +    I 
Sbjct: 311 IQREIAGELDAVTASMAKMQATDMLDDVVDRCLQLFGGYGYMMEYPITQKFAAARVMRIY 370

Query: 444 LGSGNAM 450
            G+   M
Sbjct: 371 GGTNEIM 377


>gi|311893763|dbj|BAJ26171.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 111/254 (43%), Gaps = 21/254 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A + ++  +  D  + L G K W  ++ +S+ + ++A  +       +  
Sbjct: 129 LSEPEAGSDAAGMRTRAVRDGD-FWVLDGVKRWITNAGVSEFYTVMAVTDPSARSRGISA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            + +    G+ +   + K+G + + T E+ F         ++G+    TG    M+ L  
Sbjct: 188 FVVEKGDAGVSFGAPERKLGIKGSPTREVYFDGVRIPADRMIGEEG--TGFATAMRTL-- 243

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            D   ++++   + +A+     A  Y R R   G  + D   ++  +AD+A+ + AA  L
Sbjct: 244 -DHTRVTIAAQALGIAQGALDYAKGYVRERRQFGKAIADFQGVQFMLADMAMKLEAARQL 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  A     A+S+  +           K +   +A  V  +A++ +GG GY  +  + R
Sbjct: 303 TYAAA-----ARSQRGDGDLT-FFGAAAKCFASDVAMEVTVDAVQLLGGYGYTRDYPVER 356

Query: 433 HYRESPANSILLGS 446
             R++    I  G+
Sbjct: 357 MMRDAKITQIYEGT 370


>gi|269928829|ref|YP_003321150.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269788186|gb|ACZ40328.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 586

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 36/316 (11%)

Query: 152 MSPS----VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           M+P+    VT  +   + T P V+  W  +   ++Y P     +          L+E   
Sbjct: 100 MAPTGGFAVTYGAHTGIGTLPLVY--WGTEEQKKKYLPK----LASGEWIAAYALSEPGS 153

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLED 264
           G+D     ++    +DG  Y L+G K F+S S  ++ F + A+V+G     FLV R    
Sbjct: 154 GSDALGARTRATLSADGRHYLLNGTKQFISNSGFANLFTVFAKVDGEHFTAFLVERDF-- 211

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+     + K+G ++++T +L   N       +LG+  +  G      IL +    
Sbjct: 212 ---PGVSLGPEEKKMGIKASSTRQLILENAQVPVENVLGE--IGKGHRIAFNILNFGRYK 266

Query: 322 IMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           + +  V   + +LA +  YA+ R   G  +     +++ +A++A       +  +R    
Sbjct: 267 LGAGGVGAAKHALALSATYAKERRQFGRPIASFGAIQQKLAEMATRTYVTESAVYRTVGL 326

Query: 380 FDEAKSRSEEAAYARIMAPITKYWC-CKMAPAVIAEAMECI--------GGSGYIEERSI 430
            DEA +   +     I+A I +Y   C +   +  E M+          GG G++++  I
Sbjct: 327 IDEAIAG--KTGTDAILAGIQEYAVECSILKVLGTETMDYAVDEGVQIHGGYGFLQDFPI 384

Query: 431 ARHYRESPANSILLGS 446
            R YR+S    I  G+
Sbjct: 385 ERAYRDSRVQRIFEGT 400


>gi|318059918|ref|ZP_07978641.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318077525|ref|ZP_07984857.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 395

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 16/224 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T  AIG  GLTE   G+D   + ++ ++  D  + L G K W  +
Sbjct: 118 FGSEEQKREWLPRMATGEAIGCFGLTEPDHGSDPGGMRTRARRAGDD-WVLDGRKMWITN 176

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             ++   ++ A+ E  V  F+VP         G     + +K   R++ T EL       
Sbjct: 177 GSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPITHKGSLRASVTSELLLDGVRL 231

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILID 351
               +L ++    GP+  +    Y    I+  ++   R     A+ YA+ R   G  L  
Sbjct: 232 PADAVLPEVTGLRGPLSCLNEARY---GILWGALGAARSCFRTALSYAKERDQFGKPLAG 288

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             + +  +AD+A+++   T L+  L    D    R E+ +  ++
Sbjct: 289 FQLTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQVSLGKL 332


>gi|308175013|ref|YP_003921718.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM 7]
 gi|307607877|emb|CBI44248.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM 7]
          Length = 594

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 51/315 (16%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
               E   P G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 ----EKNYP-GVSTGPEEKKMGIKGSSTRTLILDQAEVPKEN----LLGE--IGKGHVIA 258

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             IL      L    +  S   + L+ A  YA +R      +    + +  +A ++  + 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSAA--YANQRRQFKTPISSFTLTQEKLATMSARLY 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA---RIMAPITKYWC-CKMAPAVIAEAMECI---- 419
           A  +  +R    F++  SR  E A      +   I +Y   C +     +E ++ I    
Sbjct: 317 AMESSVYRTVGLFEDNMSRLTEEAQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEG 376

Query: 420 ----GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
               GG G+++E  + R YR+S  N I  G+     L V            L L EK   
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKA 436

Query: 464 LFEQLFSTLEQDLGS 478
           L E+L   + ++ GS
Sbjct: 437 LQEELMMLMPEEPGS 451


>gi|114589061|ref|XP_001139761.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 633

 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 192 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 251

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 252 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKIPVENILGE--VGDG 304

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 305 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 364

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 365 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 417

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 418 YTRDYPYERILRDT 431


>gi|296140732|ref|YP_003647975.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028866|gb|ADG79636.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 402

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 32/244 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVP 259
           LTE   G+D  A+ +   +  D        +W  ++   D  I+ A+   +G+V  F+V 
Sbjct: 147 LTEPNHGSDSVALEATATRDGDHWVINGAKRWPGNAVWCDIIIVFARDTADGKVKGFVV- 205

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVED 311
              E   P    Y+    KIG +    V L        +L DL +          G  + 
Sbjct: 206 ---EKDDPG---YR--ATKIGGK----VSLRMVQNADIVLDDLRIPDDRRLVNCNGFPDV 253

Query: 312 MKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            K+L+   + +   S G  V+  E A++YA++R   G  + +  V++  + ++  ++ A 
Sbjct: 254 SKVLMGTRNQVAWASTGHAVAAYEIALNYAQKRVQFGKPIANTQVVQSKLVEMLGEVTAM 313

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                RL    DE        A    MA + KY+C   A  V   A + +GG+G   E  
Sbjct: 314 QLYCIRLGRLLDEG-------AVTDTMAALAKYFCSVKARHVCRLARDVLGGNGITLEFH 366

Query: 430 IARH 433
           + RH
Sbjct: 367 VMRH 370


>gi|89333132|dbj|BAE82727.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 389

 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 111/280 (39%), Gaps = 44/280 (15%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           +K   A  LG+TE   G+D +A+ +   + +  IY ++ HK F++      +++    E 
Sbjct: 120 KKGLCAFSLGITEPGAGSDDSAMMATATRRNGKIY-INAHKTFITEAKQRPYMLCLTREL 178

Query: 251 ----------------GRVGCFLVP--RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
                            + G  ++P  ++  + +P    Y                  F 
Sbjct: 179 NAPNPHKAISMWWVDMSKPGVKVMPWEKIGGNTAPTYEVYLEDVELEEEDLVGVEGEGFM 238

Query: 293 NTFG-FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           N  G F +  + ++ G      +L + ++A            +A  YA +R   G  +  
Sbjct: 239 NLMGNFEVERIQIAAG------VLGWAEAA----------FEDAAVYANQRVQFGKPIGS 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  I ++A+ I     L ++       A    E     +I +  TKY+C + A  V
Sbjct: 283 FQLIQEKIVEMAIKIENMRNLVYK-------ACWERENGMSLQISSATTKYYCVRAANQV 335

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           I +AM+ +GG GY ++  I+R +R+        G+   M+
Sbjct: 336 IDDAMQIMGGIGYTKDHRISRLWRDVRNTRFGGGTDEIMI 375


>gi|229491534|ref|ZP_04385355.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321215|gb|EEN87015.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 380

 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 130/287 (45%), Gaps = 35/287 (12%)

Query: 189 APMQKTSVAIGL--------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           +P QK +V  G+         ++E   G+D+  ++ + +K+ DG + ++G K W  ++  
Sbjct: 105 SPAQKEAVLGGIVRGASQSISMSEPEAGSDVGNLSCRAEKV-DGGWLINGQKTWCSNAHF 163

Query: 240 SDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           ++  +++A+    EG+   +  F VP  +     +GL    +    G   N   +L F++
Sbjct: 164 AENILLVARTSRGEGKHEGLTMFHVPADI-----SGLKISGIDTMGGKEVN---DLYFTD 215

Query: 294 TF---GFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           TF     ++G++ N     +  + I   + +A+M  +  R +  + + +   R   G  +
Sbjct: 216 TFLPDDAVVGEVGNGWRQLMAGLNIERLILAAMMLGTAQR-AFDDTLEFVTTRKQFGRPV 274

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+A +I     L + +A   D   ++     + R  A + K    + A 
Sbjct: 275 GSFQALRHRIADLATEIECGRLLVYSVARMVDANPTK----MFPR-EASMAKLKLTETAK 329

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V  E M+ +GG GY  E  +  H R++  +SI  G+ N +  D++ 
Sbjct: 330 KVALEGMQMMGGYGYATEFDMEHHVRKTLVSSIYGGT-NEIQRDIIG 375


>gi|226308998|ref|YP_002768958.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188115|dbj|BAH36219.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 130/287 (45%), Gaps = 35/287 (12%)

Query: 189 APMQKTSVAIGL--------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           +P QK +V  G+         ++E   G+D+  ++ + +K+ DG + ++G K W  ++  
Sbjct: 105 SPAQKEAVLGGIVRGASQSISMSEPEAGSDVGNLSCRAEKV-DGGWLINGQKTWCSNAHF 163

Query: 240 SDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           ++  +++A+    EG+   +  F VP  +     +GL    +    G   N   +L F++
Sbjct: 164 AENILLVARTSRGEGKHEGLTMFHVPADI-----SGLKISGIDTMGGKEVN---DLYFTD 215

Query: 294 TF---GFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           TF     ++G++ N     +  + I   + +A+M  +  R +  + + +   R   G  +
Sbjct: 216 TFLPEDAVVGEVGNGWRQLMAGLNIERLILAAMMLGTAQR-AFDDTLEFVTTRKQFGRPV 274

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+A +I     L + +A   D   ++     + R  A + K    + A 
Sbjct: 275 GSFQALRHRIADLATEIECGRLLVYSVARMVDANPTK----MFPR-EASMAKLKLTETAK 329

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V  E M+ +GG GY  E  +  H R++  +SI  G+ N +  D++ 
Sbjct: 330 KVALEGMQMMGGYGYATEFDMEHHVRKTLVSSIYGGT-NEIQRDIIG 375


>gi|170062286|ref|XP_001866602.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880244|gb|EDS43627.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 502

 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 113/284 (39%), Gaps = 37/284 (13%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           P   T    G   LTE   G+D A++ S+      G  Y L+G K W     ++D F   
Sbjct: 160 PQLATGKVFGAFALTEPSVGSDAASVKSRAVLSPCGKYYILNGTKIWCSGGGIADIFTTF 219

Query: 247 AQVE----------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF----- 291
           AQ E           ++  F+V R        G+     ++K+G + + T ++ F     
Sbjct: 220 AQTEVVDPETGEKRDKMTAFIVERGF-----GGVSSGTPESKMGLKCSVTTDVYFDDVKV 274

Query: 292 --SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
              N  G +     V+   +   +  +    A M    MR  + +A  +   R      L
Sbjct: 275 PVENVLGEVGNGFKVAVNILNSGRFGL----AAMLSGTMRACIQKAAEHVTTRVQFKRKL 330

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMA 408
            D   ++  +A +A+    A  L+F ++ + D+  +    EAA  ++      ++ C   
Sbjct: 331 KDFENVQEKLARMAMHHYVAQTLTFMVSGNMDKGSTEYHLEAAITKVFGTEAGWYVCD-- 388

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                EA++ +GG+GY++   + +  R+     I  G+ + + L
Sbjct: 389 -----EAIQLLGGNGYMKATGLEQFMRDMRVFRIFEGANDVLRL 427


>gi|328913336|gb|AEB64932.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens LL3]
          Length = 594

 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 51/315 (16%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
               E   P G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 ----EKNYP-GVSTGPEEKKMGIKGSSTRTLILDQAEVPKEN----LLGE--IGKGHVIA 258

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             IL      L    +  S   + L+ A  YA +R      +    + +  +A ++  + 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSAA--YANQRRQFKTPISSFTLTQEKLATMSARLY 316

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA---RIMAPITKYWC-CKMAPAVIAEAMECI---- 419
           A  +  +R    F++  SR  E A      +   I +Y   C +     +E ++ I    
Sbjct: 317 AMESSVYRTVGLFEDNMSRLTEEAQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEG 376

Query: 420 ----GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
               GG G+++E  + R YR+S  N I  G+     L V            L L EK   
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKA 436

Query: 464 LFEQLFSTLEQDLGS 478
           L E+L   + ++ GS
Sbjct: 437 LQEELMMLMPEEPGS 451


>gi|255582668|ref|XP_002532113.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223528216|gb|EEF30275.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 440

 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 32/245 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGRVG 254
           LTE   G+D +A+ +  +K+  G + L G K W  +S  +D  ++ A      Q+ G + 
Sbjct: 175 LTEPEYGSDASALKTTARKVEGG-WILDGQKRWIGNSTFADVLVVFARNTSTEQINGYI- 232

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDM 312
                  ++  +P GL   +++NKIG R     ++     F   + D +   G    +D 
Sbjct: 233 -------VKKDAP-GLTATKIENKIGLRMVQNGDILLKQVF---IPDEDRLPGVNSFQDT 281

Query: 313 KILIYLDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             ++ +   +++    G+ + + +  H Y + R   G  L    + ++ +  +  ++ A 
Sbjct: 282 NKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNVQAM 341

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +RL   ++  K  S  A+ A       K W    A    A   E +GG+G + +  
Sbjct: 342 VLVGWRLCKLYETGKMTSGHASMA-------KAWITSKARETAATGRELLGGNGILADFL 394

Query: 430 IARHY 434
           +A+ +
Sbjct: 395 VAKAF 399


>gi|258573887|ref|XP_002541125.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901391|gb|EEP75792.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 424

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 59/287 (20%), Positives = 117/287 (40%), Gaps = 39/287 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +++ D        KW  +   +D +   A   G  G   + 
Sbjct: 151 LGITEPDAGSDVSGIKTTARRVGDKYIVNGAKKWITNGIFAD-YCTAAVRTGGPGRKGIS 209

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +++ N   N S +T  LEF +               F +++ + N  
Sbjct: 210 LLIIPLNSKGVSRRQMYNSGVNASGSTF-LEFDDVEVPAENLVGKENHGFKYVMSNFNPE 268

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + + S+ + +S  RV + +A +YA  R   G  LI+  +++  ++     
Sbjct: 269 R---------LGMASSCIRLS--RVCVEDAFNYAITRETFGQPLINNQIIRAKLSKFGQL 317

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I    A   +LA +        +E     + A + K    +    V  EA + +GG+GY 
Sbjct: 318 IEPCQAFMEQLAYTIQLNAKTGKEVDVGGMTA-LLKVMSTRCLEKVCREAQQILGGAGYN 376

Query: 426 EE------RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +        +I+R  R       ++G G+  +L  L + ++   +FE
Sbjct: 377 KAGKGARIEAISRDVR-----VFVVGGGSEEILRDLAVRQEMKFMFE 418


>gi|146305633|ref|YP_001186098.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573834|gb|ABP83366.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 426

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 18/150 (12%)

Query: 308 PVE------DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
           PVE      D     +LD + +++  + V  A+A       Y   R   G  +  +  + 
Sbjct: 281 PVERRLAAADFDFQAFLDHSALALCALAVGTAQAALDYVTTYCNERQAFGEPISHRQGVA 340

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +ADIA+++ A   L +R       A +R+E     R  A + + +C + A  + ++A+
Sbjct: 341 FMVADIAIELDAMRLLLWR-------ACTRAEAGLPFRREAYLARLFCAEKAMKIGSDAV 393

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG G+ +E  + R YR+  + ++L G 
Sbjct: 394 QLLGGHGFTQEHPVERWYRDLRSVAVLAGG 423


>gi|67540448|ref|XP_663998.1| hypothetical protein AN6394.2 [Aspergillus nidulans FGSC A4]
 gi|40739226|gb|EAA58416.1| hypothetical protein AN6394.2 [Aspergillus nidulans FGSC A4]
 gi|259479382|tpe|CBF69555.1| TPA: acyl-CoA dehydrogenase family protein (AFU_orthologue;
           AFUA_6G10880) [Aspergillus nidulans FGSC A4]
          Length = 512

 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 42/268 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG Y +     KW  +   +D F+   +        L
Sbjct: 245 LAVTEAFAGSDVAGLRTTAEKTPDGKYYIVNGTKKWITNGMYADYFVTACRTSKGFSVLL 304

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +PR       + +   ++K      + AT  +EF+N       LLG         E+ K 
Sbjct: 305 IPR------DSAVETTQIKTSYSTTA-ATAFVEFNNVKVPVDHLLG---------EEHKG 348

Query: 315 LIYL------DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIAD-IAL 364
            I +      +  +M  + +R S+    E + +  +R V G  LI+QPV+++ +A  I+L
Sbjct: 349 FIVVMSNFNHERYMMVCAVVRFSMTVVEECLKWCNQRIVFGKRLIEQPVIRQKLARMISL 408

Query: 365 ---DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              + A   ++++++ N     +S++       + + +T+  C   A  +  +A    GG
Sbjct: 409 TESNQAWLESIAYQMNNMTYAEQSKNLGGPIGLLKSHVTR--C---AGEIAEQATNIFGG 463

Query: 422 SGYIEE---RSIARHYRESPANSILLGS 446
            G  +    R I    R    +SIL G+
Sbjct: 464 RGLTQTGMGRVIEMFNRTYKFDSILGGT 491


>gi|326388422|ref|ZP_08210018.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207154|gb|EGD57975.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 378

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 23/244 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE R G++ A +  +   +  G Y L+G K F+S+   +D  ++ A  +       +  
Sbjct: 124 LTEPRAGSNPADMGCRAVPVEGG-YRLTGTKHFISNGGHADFIVVFAVTDPEAAHRGISA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMKI 314
            + D    GL     +  +G R     EL F       N  G         +G    MK+
Sbjct: 183 FVVDRDTPGLVVGAPEKTMGLRGGHVFELAFDCLVPAGNRVG------AEGSGFRTAMKV 236

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    ++ A M +     +L  A  + R+R + G +L D   ++  +AD+A  + AA  L
Sbjct: 237 LDNGRIEVAAMCLGLAGAALDAARDWVRQRKIGGQLLGDYQGIQWMLADMATQLQAARLL 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                 + D A  R+    + R  A + K +  + A  V   A++  GG GYI +  + R
Sbjct: 297 ------TRDAAAKRAAGERFTRQSA-MAKLFASETAGKVADAALQIHGGYGYIRDLPLER 349

Query: 433 HYRE 436
           + R+
Sbjct: 350 YVRD 353


>gi|254418992|ref|ZP_05032716.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185169|gb|EDX80145.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 387

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 40/257 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVG 254
            G+TE   G D  +I++   K+ DG Y +SG K W  +  ++D  ++L +     E R  
Sbjct: 124 FGVTEPDAGLDTTSISTFATKV-DGGYRVSGRKMWTSTGQVADKILLLTRTSPKDEARPT 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNR---SNATVELEF-----------SNTFGFLLG 300
             L      D     +  +R+ +K+G     SNA    ++              FG++L 
Sbjct: 183 HGLT-LFYADLDRTQIEVRRI-HKMGRNAVDSNAVFIDDYFIPEADRIGEEGKGFGYILH 240

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            LN         ++L+    A  +V   R +L  A  YAR R V G  +     ++  +A
Sbjct: 241 SLNPE-------RVLV----ASEAVGLGRDALRRAATYARERVVFGRPIGQNQGIQHPLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +    + AA  ++ R    +D+ +    EA  A+ +A        + A      A+   G
Sbjct: 290 ECWTKLEAAWGMTLRAGWLYDQGRPCGAEANAAKFLA-------GQAAFDTTTRAVLTHG 342

Query: 421 GSGYIEERSIARHYRES 437
           G GY  E  + R +RES
Sbjct: 343 GMGYAREYQVERLFRES 359


>gi|194289580|ref|YP_002005487.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193223415|emb|CAQ69420.1| putative ACYL-COA DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424]
          Length = 620

 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 57/312 (18%)

Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252
           L+E + G+ ++ IT+    +G+      Y L G+K ++S+   +       ++LA++ G 
Sbjct: 163 LSEPQAGSSLSDITTRAEYEGESPLGAQYRLRGNKMWISAGEHELSENIVHLVLAKIPGP 222

Query: 253 VG----------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF------ 291
            G           F+VP+ L  EDGS    N +    L +K+G R      L F      
Sbjct: 223 DGKLIPGVKGISLFIVPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKY 282

Query: 292 -----SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                +   G+L+G+    L      + + +I + L + ++  +G   +L  A +  + R
Sbjct: 283 KPGGKAGAIGYLVGEPHKGLACMFHMMNEARIGVGLGAVMLGYTGYLHALDYARNRPQGR 342

Query: 343 HVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            V  G          L++   ++R +      +    AL+   A   DE ++ +     A
Sbjct: 343 PVGPGGKDAASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEEEAAAAAGDEA 402

Query: 394 R---------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     I+ PI K W  +        A++  GG GY  E ++ + YR++  N I  
Sbjct: 403 AHARLALLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHE 462

Query: 445 GSGNAMVLDVLN 456
           G+     LD+L 
Sbjct: 463 GTHGIQGLDLLG 474


>gi|327191532|gb|EGE58547.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 386

 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 32/263 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ---------V 249
           L +TE   G+D+  +    ++   G + L+G K F+S + ++D  I+ A          V
Sbjct: 122 LAITEPDAGSDMRGMKCAARR-DGGDFVLNGTKHFISHADVADFVIVFAATGEEETPKGV 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLK--NKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + ++  FLV R    G+P    ++ LK  + + +R      L F++       +LG+++ 
Sbjct: 181 KKKITAFLVDR----GTPG---FEILKGYDSVSHRGYHNCTLSFTDCRIPEAQVLGEVHR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIA 363
                        L  A   V   R     A+ YA  RR     I  +Q V  + +AD+ 
Sbjct: 234 GFDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERRQFGKPIGANQGVSFK-LADMI 292

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L+   A   D   S   + A A++ A        +M   V  EA++  GG G
Sbjct: 293 TEIDAAEWLTLAAAWRIDVGLSADRQIASAKLYA-------SEMLARVTDEAIQIFGGMG 345

Query: 424 YIEERSIARHYRESPANSILLGS 446
            +++  +AR +R++    I  G+
Sbjct: 346 LMDDLPLARFWRDARVERIWDGT 368


>gi|331697778|ref|YP_004334017.1| Long-chain-acyl-CoA dehydrogenase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326952467|gb|AEA26164.1| Long-chain-acyl-CoA dehydrogenase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 31/265 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255
           + +TE   G+D+A++T+   +  D  Y ++G K F+++ ++   ++ A      +   G 
Sbjct: 126 IAMTEPGIGSDLASMTTTAVRDGDH-YVVNGAKTFITNGINADLVITAVKTDPTQRHKGM 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-------VS 305
            L+  ++E G   G    R  +K+G  +  T EL F++       LLG+         VS
Sbjct: 185 SLL--VIERGMA-GFERGRNLDKLGQHAQDTAELSFTDVRVPVANLLGETEGEGFTQLVS 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             P E + I         +V+  R +L   + Y + R   G  +      +  +A++  +
Sbjct: 242 NLPQERLSI------GYAAVAAARYALNLTLDYVKERKAFGQPIGSFQNSRFVLAELDTE 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A         + D  +  + +A+ A       KYWC ++   V+ + ++  GG GY+
Sbjct: 296 IDIAQHYVDACVRALDAGELTAADASKA-------KYWCTELQGRVVDKCLQLHGGYGYM 348

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  I+R + ++    I  G+   M
Sbjct: 349 AEYPISRAFADARITRIYGGTTEIM 373


>gi|238490124|ref|XP_002376299.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
 gi|220696712|gb|EED53053.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
          Length = 444

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 26/256 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
            GLTE   G+D   +++   ++  G       KW   +      I  A+  G+ G     
Sbjct: 159 FGLTEPDHGSDATFMSTTATRVRGGFEINGAKKWQTGAHHCTHMIFFARTSGQDGSAKGI 218

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT---VELEFSNTFGFLLGDLNVSTGPVE 310
             FL+PR  E        Y+   N   + +  T   V +  S   G +   L ++   V 
Sbjct: 219 TAFLIPRETE--GVEIASYEWTFNMPTDHATVTLNGVWVPESAVLGTVDQGLAIAQTFVH 276

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVMKRAIADIALDIAA 368
           + +I      A  S    +  L  AI  AR R V   G  L D   ++  + ++   +  
Sbjct: 277 ENRI----RQAASSCGAAKFCLERAIERARSRTVWGEGKKLADHQAVQFPVVELMTQVEM 332

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGS 422
              L  + +   D   + S++ A+  I         +  +W  ++       A++  GG 
Sbjct: 333 LRLLILKTSWEMDRVVAESQDKAWIAIERRLSDKVAMCNFWANRLCCQAADRAIQIHGGD 392

Query: 423 GYIEE---RSIARHYR 435
           GY        I RH+R
Sbjct: 393 GYSRHYPFEHIYRHFR 408


>gi|21361497|ref|NP_054768.2| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Homo sapiens]
 gi|114589055|ref|XP_001140184.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
 gi|114589057|ref|XP_001140269.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 6 [Pan troglodytes]
 gi|32469596|sp|Q9H845|ACAD9_HUMAN RecName: Full=Acyl-CoA dehydrogenase family member 9,
           mitochondrial; Short=ACAD-9; Flags: Precursor
 gi|10436258|dbj|BAB14775.1| unnamed protein product [Homo sapiens]
 gi|14044102|gb|AAH07970.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Homo sapiens]
 gi|15426498|gb|AAH13354.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Homo sapiens]
 gi|119599701|gb|EAW79295.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Homo
           sapiens]
 gi|119599702|gb|EAW79296.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Homo
           sapiens]
 gi|123993681|gb|ABM84442.1| acyl-Coenzyme A dehydrogenase family, member 9 [synthetic
           construct]
 gi|123999971|gb|ABM87494.1| acyl-Coenzyme A dehydrogenase family, member 9 [synthetic
           construct]
          Length = 621

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 180 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKIPVENILGE--VGDG 292

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 406 YTRDYPYERILRDT 419


>gi|297625153|ref|YP_003706587.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297166333|gb|ADI16044.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 450

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 23/265 (8%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHK-WFLSSP 238
           RE+ P     M++  V    GLTE   G+ I+  +T+  ++  D  + L+G K W  ++ 
Sbjct: 177 REWLPR----MRRFEVIGAFGLTEPEVGSAISQGMTTTCRREGD-TWVLNGEKYWIGNAT 231

Query: 239 MSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            SD  I+ A+ E   +V  F+V R     +P G   +++ NKI  R+     +   N   
Sbjct: 232 FSDITIVWARDEADNQVKGFIVRR----DNP-GFSVRKIANKIALRAVENGHITLQNCRV 286

Query: 297 FLLGDLNVSTG--PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L  +T      D+  +     A   V     +  +++ YA++R   G  + +  +
Sbjct: 287 PESDRLQNATSFRTTADVLRMTRAGVAWQGVGCAMGAYEKSLAYAQKRLQFGRPIANFQL 346

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  +  ++ A   + FRLA   D      E+A+ A++       +  K     +A 
Sbjct: 347 VQNLLVQMLGNVTAMQTMCFRLAQLQDAGVMTDEQASLAKV-------FTAKRCRETVAL 399

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E  GG G + +  +AR++ ++ A
Sbjct: 400 ARELHGGKGILLDHHVARYFADTEA 424


>gi|118431552|ref|NP_148093.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|116062877|dbj|BAA80682.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 389

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 30/254 (11%)

Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----E 250
           AIG   LTE   GTD+A++     K   G Y +SG K F++ S  +D FI+ A+     E
Sbjct: 124 AIGAFALTEPCCGTDVASLHMTTAKREGGEYVVSGQKIFITNSAYADFFIVAARTGKLEE 183

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFS-------NTFGFLLGDL 302
              G  L   L+ D S    C +  K   +G R + T  + F+       N  G   G  
Sbjct: 184 RHRGISL---LIVDRSD---CVEVSKLEMMGYRGSGTSIVYFNDCRVPSENLIGQEGGGF 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +    + + +I     ++   +  M+ +   A+ +A  R   G  +I+  ++   IA++
Sbjct: 238 KLVMHTLNEGRI----STSASGLGVMQAAFDAALKHAGERESMGRPIIEHQMVSSMIAEM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + +  +  L +  A+  D     +    Y +  A + K         ++  AM+ +GG 
Sbjct: 294 LVRLETSRLLVYTAAHKLD-----TNSPDYIK-YASLAKLHTATAGVDLVRMAMQVLGGI 347

Query: 423 GYIEERSIARHYRE 436
           GY  E  + R+YR+
Sbjct: 348 GYSRESDVERYYRD 361


>gi|15827273|ref|NP_301536.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221229751|ref|YP_002503167.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|2326698|emb|CAB11011.1| hypothetical protein MLCB1779.30 [Mycobacterium leprae]
 gi|13092822|emb|CAC30170.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219932858|emb|CAR70755.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 465

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +  S + FI+ AQ+ G+   F+V     + S  GL   +    +G R+ 
Sbjct: 251 YRLDGVKSLVPAAASAELFIIGAQLNGKPALFIV-----ESSTKGLTV-KADPSMGIRAA 304

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E       L   LG+ + +     +   L  L  A ++V      L   + Y + 
Sbjct: 305 ALGQVELCGVSAPLDARLGEDDATDNDYSEAIALARLGWAALAVGTSHAVLDYVMPYVKE 364

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++  S + EAA A+ +     
Sbjct: 365 REAFGEPIARRQAVAFMCANIAIELDGLRLITWRGASRAEQGLSFAREAALAKRLG---- 420

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 A  +  + ++ +GG G+I+E  + R YR+
Sbjct: 421 ---SDKAMQIGLDGVQLLGGHGFIKEHPVERWYRD 452


>gi|302525974|ref|ZP_07278316.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302434869|gb|EFL06685.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 388

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 52/299 (17%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   ++++   TP   K W P              M   S  I   +TE   G++
Sbjct: 90  VVSPAIVG-TVLSRFGTPDQKKQWLPG-------------MSDGSKKIVFAITEPDAGSN 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE----GRVG--CFLVPRLLE 263
              IT+  ++   G + LSG K F+S    +DA +++ + E    GR+    F+VP    
Sbjct: 136 SHRITTTARR-DGGDWVLSGRKVFISGVDEADAVLVVGRTEDAKTGRLKPVLFVVPT--- 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS 320
                G  Y ++   I         +   N F   L D+ +    +   ED  I      
Sbjct: 192 --DAPGFEYSKIDMDI---------VAPENQFSLFLDDVRLPAEALVGEEDAAIAQLFAG 240

Query: 321 --------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A +S+   R +L +A+ YA  R V G  +     +   +A + ++   A  +
Sbjct: 241 LNPERIMGASLSLGTARYALDKAVGYANERQVWGAPIGSHQGLAHPLAQVKIEFELAKLM 300

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + + A  +D     +   +     A + KY   ++A   + +A++  GG+G   E  + 
Sbjct: 301 TQKAATLYDAGDDFASGES-----ANMAKYAAAEVAIRAVDQAVQTHGGNGLATEYGLG 354


>gi|256380956|ref|YP_003104616.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255925259|gb|ACU40770.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 404

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 130/331 (39%), Gaps = 68/331 (20%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           LM   +  A ++A    P    +W P+ F  E DP   A             +E + G+D
Sbjct: 89  LMGTGLAVAGILA-SGEPEQLAEWVPECFGDESDPQVAA----------FCASEPQAGSD 137

Query: 211 IAAITSQGQKISDGI---YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRL 261
           +A   ++   + DG    + L+G K W  +  +++  ++ A V+  +G      F+VP  
Sbjct: 138 VAGYRTR--AVYDGATDEWVLNGQKSWATNGGIANVHVVTAVVDPALGARGQAGFVVPP- 194

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKI--- 314
                  GL       K G R++ T ++         L D+ V      G  E ++    
Sbjct: 195 ----GTRGLSSPAKVRKHGMRASHTADV--------FLDDVRVPGRCLLGGRERLEARLA 242

Query: 315 -------------LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356
                        +   +S    V  M V +A A H     YA+ R   G  +++   + 
Sbjct: 243 RAREGQRAGVQGAMATFESTRPVVGAMAVGVARAAHEYALAYAKERQAFGRRIVENQSIA 302

Query: 357 RAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             +A++ ++I AA  L +R A    +     + E +  ++ A     W  +        A
Sbjct: 303 FDLANVRVEIDAARLLVWRAAWMGRNNVPFTAGEGSMCKLKAAEVAVWATE-------RA 355

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ +GG+GY  +  + R +R++   +I  G+
Sbjct: 356 IQVLGGAGYTRDHPVERMHRDAKLFTIFEGT 386


>gi|154687391|ref|YP_001422552.1| YusJ [Bacillus amyloliquefaciens FZB42]
 gi|154353242|gb|ABS75321.1| YusJ [Bacillus amyloliquefaciens FZB42]
          Length = 594

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 51/315 (16%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+V+G +   F+V
Sbjct: 150 LTEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDKFSAFIV 209

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
               E   P G+     + K+G + ++T        E+   N    LLG+  +  G V  
Sbjct: 210 ----EKNYP-GVSTGPEEKKMGIKGSSTRTLILDQAEVPKEN----LLGE--IGKGHVIA 258

Query: 312 MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             IL      L    +  S   + L+ A  YA +R      +    + +  +A ++  + 
Sbjct: 259 FNILNIGRYKLAVGTIGASKRVIELSAA--YANQRRQFKTPISSFTLTQEKLATMSARLY 316

Query: 368 AATALSFRLANSFDEAKSR--SEEAAYARIMAP-ITKYWC-CKMAPAVIAEAMECI---- 419
           A  +  +R    F++  SR   EE    R +A  I +Y   C +     +E ++ I    
Sbjct: 317 AMESSVYRTVGLFEDNMSRLTEEEQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEG 376

Query: 420 ----GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
               GG G+++E  + R YR+S  N I  G+     L V            L L EK   
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKA 436

Query: 464 LFEQLFSTLEQDLGS 478
           L E+L   + ++ GS
Sbjct: 437 LQEELMMLMPEEPGS 451


>gi|320168870|gb|EFW45769.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 419

 Score = 43.5 bits (101), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 50/276 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++ +  ++  D  Y L+G K F+S     D ++++ +  G     +   
Sbjct: 164 LTEPGAGSDAASLVTSAKREGD-FYVLNGTKSFISGGGEHDVYMVMCRTGGPGAKGISCV 222

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317
           L+E G+P GL + + + K+G  S+ T ++ F                  ED+K+ I    
Sbjct: 223 LVEKGTP-GLSFGQKERKLGWNSSPTRQVIF------------------EDVKVPIANRV 263

Query: 318 ------LDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAI 359
                    A+ +++G RV+++        EA+  AR     R   G  L      +  +
Sbjct: 264 GKEGEGFSIAMQALNGGRVNISACSLGGAQEALSIAREHLLVRKQFGKSLASLQNSQFKL 323

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           A++A  + A+  +  + A + D     +    A A++ A  T +  C        +A++ 
Sbjct: 324 AEMATGLQASRLMVRQAAQAMDSKHPAAASLCAMAKLFATDTCFDICN-------QALQL 376

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GG GY+ +  + +  R+   + IL G+   M + V
Sbjct: 377 HGGYGYLRDYKVQQFVRDLRVHQILEGTNEIMKVIV 412


>gi|321456773|gb|EFX67873.1| hypothetical protein DAPPUDRAFT_218549 [Daphnia pulex]
          Length = 436

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 21/242 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV--EG-RVG 254
            GLTE   G+D A + ++ +  +  G+Y L+G K W  +SP++D  ++ A+   EG R+ 
Sbjct: 173 FGLTEPNHGSDPAGMETKAKHDAKAGVYILNGSKTWITNSPIADVAVVWAKSLDEGNRIR 232

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            FLV R        G    +++ K   R++ T  +   +       +L  ++   GP   
Sbjct: 233 GFLVER-----GTKGFTTPKIEGKFSLRASTTGMIMLEDVVIPESNMLPKVHGLKGPFSC 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +    Y   A  ++      LA A  Y  +R   G  L    ++++ +AD   +IA A  
Sbjct: 288 LNSARY-GIAWGTLGAAEFCLAAARDYTLQRQQFGRPLAATQLIQKKMADAMTEIALALQ 346

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              ++    D      +       M  + K   C  +  +     + +GG+G  +E  I 
Sbjct: 347 GCIQVGRLKDNGLVTPD-------MISLLKRNSCGKSLDIARACRDMLGGNGISDEYHII 399

Query: 432 RH 433
           RH
Sbjct: 400 RH 401


>gi|239932184|ref|ZP_04689137.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440548|ref|ZP_06579938.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343443|gb|EFE70399.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 396

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 10/221 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A++ +  ++   G + L+G K W  +
Sbjct: 119 FGSEEQKQRWLPRMAAGEVIGCFGLTEPDHGSDPASMRTYAKR-DGGDWVLNGRKMWITN 177

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++   ++ A+ +  +  F+VP         G     +++K   R++ T EL   +   
Sbjct: 178 GSVAGVAVVWARTDEGIRGFVVPT-----DSAGFSAPEIRHKWSLRASVTSELVLDDVRL 232

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L  +TG    +  L +    I+  ++   R     A+ YA+ R   G  +    +
Sbjct: 233 PADAVLPEATGLKGPLSCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQL 292

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            +  +AD+A+++     L+  L    D  + R E+ ++ ++
Sbjct: 293 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKL 333


>gi|221236120|ref|YP_002518557.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|220965293|gb|ACL96649.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 591

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 128/332 (38%), Gaps = 41/332 (12%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +  ++    T    + W P+I S E  PT                TE   G
Sbjct: 284 GSLATRSEIAGELILTGGTDAQKEYWLPRIASAEILPTAV-------------FTEPNTG 330

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ A+ ++ +   D  Y ++G+K W   +  +D   +L + +     +    +L    P
Sbjct: 331 SDLGALRTRAELKGDS-YVVTGNKTWITHAARADVMTLLVRTDPATTDYRGLSMLLAPKP 389

Query: 268 NGLCYQRLKNK---------IGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILI 316
            G        +         IG R     EL F    GF +   N+  G       +++ 
Sbjct: 390 RGTDEAPFPAEGMSGGEIGVIGYRGMKEYELGFD---GFTVPAENLLGGVTGQGFKQLMA 446

Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +SA +  +   V +A+A     + YA  R   G  + D P +   +A +A +I     
Sbjct: 447 TFESARIQTAARAVGVAQAALEVGLSYALDRKQFGQPIFDFPRVHNKLAMMAAEIMGVRQ 506

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A+  DE K    EA  A+++A    +            A++  GG+G+  E + +
Sbjct: 507 LTYFAAHQKDEGKRCDLEAGMAKLIAARVAWAAAD-------NALQIHGGNGFAMEYAAS 559

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           R   ++   +I  G+G      +   L  G N
Sbjct: 560 RLLADARILNIFEGAGEIQAQVIARRLLDGGN 591


>gi|120403554|ref|YP_953383.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119956372|gb|ABM13377.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 403

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 53/317 (16%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A+ +A   TP    +W P++F    DP   A             +E   G+D+ +I ++
Sbjct: 94  AAASLAANGTPEQVGEWVPQMFGSVDDPKVAA----------FCSSEPNAGSDVGSILTR 143

Query: 218 GQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNG 269
            +  + +D  + L+G K W  +  +++  +++A V   +G      F++P     G+P G
Sbjct: 144 ARYDEATDE-WVLNGTKTWATNGGIANVHVVVASVHPELGTRGQASFIIP----PGTP-G 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--------------L 315
           L   +   K G R++ T E+   +    + G L V      D +I              +
Sbjct: 198 LSQGQKFLKHGIRASHTAEVVLDDV--RIPGRLIVGGKEKFDARIAKVREGKKAAGQAAM 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +    +V  M V +A A +     YA  R   G  + +   +   +AD+   I AA 
Sbjct: 256 ATFERTRPTVGAMAVGVARAAYEYALDYACEREQFGRKIGEFQAVAFKLADMKARIDAAR 315

Query: 371 ALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L +R        K   + E + A+++A  T  +       V  EA++ +GG+GY  E  
Sbjct: 316 LLVYRAGWMARNGKEFTAAEGSMAKLVASETAVY-------VTDEAIQILGGNGYTREYP 368

Query: 430 IARHYRESPANSILLGS 446
           + R +R++   +I  G+
Sbjct: 369 VERMHRDAKIFTIFEGT 385


>gi|84685019|ref|ZP_01012918.1| putative acyl-coa dehydrogenase protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666751|gb|EAQ13222.1| putative acyl-coa dehydrogenase protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 530

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 17/261 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250
           + LTE   G+D+  I ++  +  D ++ ++G K F+S    D       ++LA+      
Sbjct: 156 MALTEPGAGSDLGRIRTRAVQDGD-VWRITGEKIFISGGDQDMSKGVLHMVLARTGEMDS 214

Query: 251 GRVGCFLVPRLLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G  G  L   L +  DGS N +   R++ K+G     T +L F      L+G +      
Sbjct: 215 GVKGLSLFACLSDRADGSRNAVNVTRIEEKMGLHLQPTCQLAFDGAEAELIGAVGQGLRA 274

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI--ALDI 366
           + ++     +D A+  V+    +   A  YA  R    G   D PV      D+   LD 
Sbjct: 275 MFEIMNHARVDVALQGVAHSARAYDIASSYAAERVQGRGP--DGPVTIDKHGDVRRMLDE 332

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             A A+  R           S +  +   ++  + K++  +         M+ +GG GY+
Sbjct: 333 IDAIAMGARAMTHLALVTLESGDNPWLLELLTHVIKWYASEQGLRAAETGMQVLGGYGYL 392

Query: 426 EERSIARHYRESPANSILLGS 446
           +E  I + YR+    +I  G+
Sbjct: 393 QEYRIEQTYRDLRIAAIYEGA 413


>gi|33599646|ref|NP_887206.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567242|emb|CAE31156.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 396

 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 35/259 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+DI ++ ++ ++ + G + L G K F++S   ++A+I+LA+ +  V  F V R
Sbjct: 134 LTEANHGSDIRSLDTKARRGAGG-WTLEGRKSFITSGSAAEAYIVLAETDHGVSTFFVRR 192

Query: 261 LLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD---LNVSTGPVEDM 312
            +      DG  +G          G R+   V+L      G ++ D   + V    V   
Sbjct: 193 DMPGVSTFDGPTSG--------TFGLRNGPHVDLILD---GVVVPDDHLIGVEGKGVR-- 239

Query: 313 KILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + +  LD     +  +S+   R +   A+ YA  R      ++    ++   AD+A  I 
Sbjct: 240 QAVTTLDFSRTMAGAISLGIARAAFDNALAYAAGREAFDQKVLGFQGIQWYFADLATRID 299

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +    + DE +  +  A+ A++ A        ++A     +A++  G  G  E 
Sbjct: 300 AARLLVYEACVALDEHREIARYASEAKLAA-------SQVATRAAEQAIQICGAYGVTER 352

Query: 428 RSIARHYRESPANSILLGS 446
               R+ R++ A  I  GS
Sbjct: 353 APFGRYLRDAKAYEIAGGS 371


>gi|308447058|ref|XP_003087325.1| hypothetical protein CRE_15257 [Caenorhabditis remanei]
 gi|308257393|gb|EFP01346.1| hypothetical protein CRE_15257 [Caenorhabditis remanei]
          Length = 399

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 130 MAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGDRADSVVVWATLDKKLGRAAI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 189 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAAISF 221


>gi|302348840|ref|YP_003816478.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
 gi|302329252|gb|ADL19447.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
          Length = 409

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 60/275 (21%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-------DAFIMLAQVE 250
            G+  TE  GG+D+A   +   K ++GIY +SG K ++S            ++ ++A+  
Sbjct: 122 FGIASTEPTGGSDVAGERTSAVKDANGIYRVSGEKVYISGVREAIEQLDLGSWYLIARTS 181

Query: 251 GRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
              G      F          P G  Y  L N IG  + +T  L+F+ T           
Sbjct: 182 PEPGHRALTGFAFIGNYRGKRPEGFEYSIL-NTIGRHAISTGTLKFNGT----------- 229

Query: 306 TGPVEDMKIL------IYLDSAIMSVSGMRVS----------LAEAIHYARRRHVSGGIL 349
             PVE   ++       Y+     S++ + VS          L  AI YAR R + G   
Sbjct: 230 --PVESRYVIGQEGRGFYIAMEGFSLARVLVSAANIGAAQWALETAISYARERKLFG--- 284

Query: 350 IDQPV-----MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAP 398
            D+P+     +   IA++A  + AA  L ++ A   D      EA  R  +  Y    A 
Sbjct: 285 -DKPIASYQGVSFPIAEVASKLEAARLLVYKAAQVADRIYIKKEAGLRPHDLDYWASAAK 343

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           I        A  V+   M+  G   Y EE ++ R+
Sbjct: 344 IEAVETALNAAEVL---MKTYGALAYTEEANVFRN 375


>gi|240168800|ref|ZP_04747459.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium kansasii ATCC 12478]
          Length = 403

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 57/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
           TP     W P++F    DP   A             +E   G+D+ AI ++ +   +   
Sbjct: 103 TPEQLGRWLPEMFGTADDPKLGA----------FCSSEPDAGSDVGAIRTRARYDEAAAE 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  +  +++  I++A V   +G      F++P         GL   +   K 
Sbjct: 153 WVLNGTKTWATNGGIANVHIVVASVYPELGTRGQATFIIPP-----GTKGLAQGQKFKKH 207

Query: 280 GNRSNATVELEFSNT---FGFLLGDL------------NVSTGPVEDMKILIYLDSAI-- 322
           G R++ T E+   +       +LG                S G    MK        +  
Sbjct: 208 GIRASHTAEVTLDDVRLPADLILGGREKFEARIARAKSGASVGGQAAMKTFERTRPTVGA 267

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA  L +R       
Sbjct: 268 MAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKSRIDAARLLVWRAGWMARN 327

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             SFD A     E + A+++A  T  +       V  EA++ +GG+GY  +  + R +R+
Sbjct: 328 NQSFDSA-----EGSMAKLVASETAVY-------VTDEAIQILGGNGYTRDYPVERMHRD 375

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 376 AKIFTIFEGT 385


>gi|254390828|ref|ZP_05006039.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444439|ref|ZP_08219173.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197704526|gb|EDY50338.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 385

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 39/303 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           AS +A+ TTP   + W P + S E             +   + ++E   G+++A I +  
Sbjct: 101 ASYLAVRTTPEQRRRWLPGLCSGE-------------LVAAIAISEPDAGSNVADIRTTA 147

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            +  D  Y L+G K F+++  +   +++A      R G  L   ++E G+       RL+
Sbjct: 148 VRDGDH-YVLNGQKVFITNGENADLVLVAARTAPQRGGQGLSLFVVERGTAGFARGNRLE 206

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVS-----TG-PVEDMKILIYLDSAIMSVSG 327
            K+G  ++ T EL F         L+G  +       TG P E + I      A ++V+ 
Sbjct: 207 -KLGWNASDTCELFFDGCRVPADNLVGKEHAGMAYLMTGLPRERLSI------ATVAVAA 259

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L +A+ YAR+RH  G  +      +  +A +  ++  A           D   ++ 
Sbjct: 260 CEQMLEDALAYARQRHAFGQAIGSFQHNRFQLATMDTEVTIARVF-------LDHCVTQI 312

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                +   A   K+W  ++   +   A++  GG GY++E  I+R +  S   +I  G+ 
Sbjct: 313 NAGRLSAADAAKAKWWTTELQVEISNRAVQLHGGYGYLKESPISREWANSRVQTIYGGTT 372

Query: 448 NAM 450
             M
Sbjct: 373 EIM 375


>gi|330959426|gb|EGH59686.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255
           LTE   G++   + ++ +   D  + ++G K F+S+   ++  I+ A  + ++G      
Sbjct: 126 LTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAELAIVFAVTDPQLGKKGLSA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308
           FLVP         G    R ++K+G R++ T  +  ++       LLG+    L+++   
Sbjct: 185 FLVPT-----ENPGFTVDRSEHKMGIRASDTCAVTLNDCRIPAANLLGERGKGLSIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +AD+   I A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLADMHTRINA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+   A      +    EA+ A++ A     W C       ++A++  GG GY+E+ 
Sbjct: 296 ARLLTLHAARLRSAGQPCLSEASQAKMFASEMAEWVC-------SKAIQIHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  GS
Sbjct: 349 PVERYYRDARITQIYEGS 366


>gi|146277588|ref|YP_001167747.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555829|gb|ABP70442.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 390

 Score = 43.5 bits (101), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VG 254
           LTE+  G+D A I ++  K  D  + ++G K W   +  ++ F++ A  +        + 
Sbjct: 123 LTEEGAGSDAAGIRTRAVKRGD-TWVINGTKMWVSRAADAEVFLVSAVTDPERKPKPGIT 181

Query: 255 CFLVPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
            FL+ R   L  G+P+         ++G R + + E+ F +       +LG+L+   G +
Sbjct: 182 IFLIGRRPGLSTGAPD--------VQMGGRGSGSAEVRFEDVEAGEDEILGELHDGFGGL 233

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           + +     L +A  +V  +  +   +I ++R R   G  + +  ++K  IA++  D+ AA
Sbjct: 234 KFVLGRARLWAAARAVGVIGKAAELSIDHSRTRRQFGQPIGEFQMVKEKIANMVADLYAA 293

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA 397
               ++ A+ FD+    ++EAAYA++ A
Sbjct: 294 RLQLYQAASLFDQGIDAAQEAAYAKLFA 321


>gi|226953901|ref|ZP_03824365.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835384|gb|EEH67767.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 265

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 29/273 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           M        + +TE   G+D+ A+ +      D  Y ++G K F+++  + D  I++ + 
Sbjct: 1   MATGETVTAIAMTEPGTGSDLQAVRTTAVLEGDE-YVINGSKIFITNGYLCDMAIVVCKT 59

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                G   +  ++ +    G    +  NKIG +   T EL F N       LLG     
Sbjct: 60  GNTEKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLG----- 114

Query: 306 TGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
              +E M  ++ +          AI+  +G   + A  + Y + R   G  +      + 
Sbjct: 115 ---MEGMGFMMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGTFQNTRF 171

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++  +I              D       E +     A   KY    M   V+ E ++
Sbjct: 172 KLAELRTEIDFCRTY-------LDRCMELQLEESLGVDAAAAAKYKISDMFSKVVDECLQ 224

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IAR Y ++ AN I  G+   M
Sbjct: 225 LHGGYGYMLEYPIARAYIDNRANRIYAGTNEIM 257


>gi|301613268|ref|XP_002936129.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 423

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 33/269 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC--F 256
           +TE   G+D+A + ++ +K  +  Y ++G K W  +   ++ + +LA+   + +V     
Sbjct: 162 VTEPGAGSDVAGLKTRAEKKGNE-YIINGQKMWITNGGKANWYFLLARTNPDPKVPASKA 220

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  SP G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 221 FTGFIVEADSP-GIQIGRKEMNMGQRC--------SDTRGIVFEDVRVPAENVLIGEGAG 271

Query: 312 MKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D     V+   V LA     EA  YA  R   G ++ +   +   +A++A+ 
Sbjct: 272 FKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYAVERKTFGKLIAEHQAVSFMLAEMAMK 331

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  V ++A++  GG+G+ 
Sbjct: 332 VELARLAYQRAAWEVDAGRRNT-------YYASIAKAYAGDIANQVASDAVQVFGGNGFN 384

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
            +  + +  R++    I  G+     L V
Sbjct: 385 SDYPVEKLMRDAKIYQIYEGTAQIQRLIV 413


>gi|238062005|ref|ZP_04606714.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237883816|gb|EEP72644.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 618

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 75/364 (20%), Positives = 153/364 (42%), Gaps = 69/364 (18%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252
           LTE   G+D+ A  ++     DG + + G K F++S    +SD  +  +LA+  G     
Sbjct: 164 LTEPDAGSDVGAGRTRAIPQPDGSWHIEGVKRFITSGEHDLSDNIVHYVLARPVGVEGVG 223

Query: 253 ------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296
                 +  F+VP+   D      G  NG+    +++K+G + + T E+ F        G
Sbjct: 224 GPGTKGLSLFVVPKFHFDAETGELGERNGVYATNVEHKMGIKVSNTCEMTFGEHGVPAKG 283

Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-- 352
           +LLG+ +   G  +   I+ Y  +     +++ +      A+ YA+ R V G  LI Q  
Sbjct: 284 WLLGEKH--DGIRQMFMIIEYARMMVGTKAIATLSTGYLNALEYAKNR-VQGADLIQQAD 340

Query: 353 -----------PVMKRAI---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----- 393
                      P ++R++      A  + A    +    +    A++  +E A       
Sbjct: 341 KTAPRVTITHHPDVRRSLMLQKSYAEGLRALVCYTASWQDQVAIAEAAGDERATKIAKRV 400

Query: 394 -RIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             ++ P+ K    + A  ++  EA++  GGSG++++  + ++ R++  +++  G+     
Sbjct: 401 NDLLLPLVKGVGSERAYEMLGHEALQTFGGSGFLQDYPLEQYVRDAKIDTLYEGTTAIQS 460

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
           LD+             +F  + +D   +GK + T+  +       + G  +   E+ AL 
Sbjct: 461 LDL-------------IFRKIARD---NGKALTTVAGEIQEFITSEGGNGQLKQERQALG 504

Query: 512 SSAA 515
            + A
Sbjct: 505 KALA 508


>gi|146231716|gb|ABQ12933.1| acyl-Coenzyme A dehydrogenase family, member 9 [Bos taurus]
          Length = 620

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++    +D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 179 LTEPASGSDAASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVK 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 239 DKITAFIVERDF-GGVTNG----KAEDKMGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 293

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S    V+GM   L E    YA  R      L +  +++   A +
Sbjct: 294 VAVNILNSGRF-----SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFALM 348

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D       S EAA  ++ +     W C      ++EA++ +G
Sbjct: 349 AQKAYVMESMAYLTAAMLDAPGFPDCSIEAAMVKVFSS-EGAWTC------VSEALQILG 401

Query: 421 GSGYIEERSIARHYRES 437
           G GY+ +    R  R+S
Sbjct: 402 GLGYMRDYPYERLLRDS 418


>gi|257792823|ref|YP_003183429.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317489216|ref|ZP_07947733.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325832272|ref|ZP_08165271.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|257476720|gb|ACV57040.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316911617|gb|EFV33209.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325486108|gb|EGC88562.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 385

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 46/279 (16%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ------VEG 251
           + LG++E   G+D+A + +      D      G  +      + A I++A+      V  
Sbjct: 122 LALGISEPSTGSDVAGMQTSYAWDGDTAVINGGKHYTTCGMEAPAIIVIAKDPTVDNVHR 181

Query: 252 RVGCFLV------------PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
               FLV            P++  + +P  +C +   N +    +A + +E +   GF+ 
Sbjct: 182 GATMFLVDRDTPGVTINKLPKMGHENAPTSIC-EVFLNDVRVPRSAILGVEHN---GFMQ 237

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS----LAEAIHYARRRHVSGGILIDQPVM 355
              N             +    I +VSG+  +      +A  YA +R   G  +    ++
Sbjct: 238 TMAN-------------FTRERIANVSGVIATAVNAFEDACAYANQREQFGQQIGRFELV 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  I +++  I     + ++L    D+ +         RI+A + KY+C K    V+ +A
Sbjct: 285 QEMIMEMSCKIENMMNMLYKLCWQADQGQD-------VRILAGMAKYYCSKATCEVVDDA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ + G G + +  + R+Y +  +  I  GS   MV + 
Sbjct: 338 IQVLAGIGVVGDHRVGRYYIDIRSARIAGGSDQVMVFNT 376


>gi|114589063|ref|XP_001139588.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Pan troglodytes]
 gi|114589065|ref|XP_516734.2| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 7 [Pan troglodytes]
 gi|10434033|dbj|BAB14104.1| unnamed protein product [Homo sapiens]
 gi|119599700|gb|EAW79294.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b [Homo
           sapiens]
 gi|194388598|dbj|BAG60267.1| unnamed protein product [Homo sapiens]
          Length = 498

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 57  LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 116

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 117 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKIPVENILGE--VGDG 169

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 170 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 229

Query: 366 IAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 230 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 282

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 283 YTRDYPYERILRDT 296


>gi|170581352|ref|XP_001895647.1| isovaleryl-CoA dehydrogenase [Brugia malayi]
 gi|158597329|gb|EDP35503.1| isovaleryl-CoA dehydrogenase, putative [Brugia malayi]
          Length = 369

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 18/187 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG++E   G+D+AAI +  +   + +      +W  +   +D   +LA    +   +   
Sbjct: 138 LGVSEACAGSDVAAIRTTARWHGNDLIIDGSKQWITNGTQADWICLLANTNDKPSPYRNK 197

Query: 260 RLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDM 312
            L+     E G     C +    K+G  S+ T E+ F+N     +   N+    G     
Sbjct: 198 SLICVPLNEPGVHRSNCIE----KLGMHSSDTAEIYFNNV---RVPSRNIIGEEGHGFVY 250

Query: 313 KILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           ++L + D  +++++     M+  +   I Y R+R V  G ++D  ++   +A++  DI A
Sbjct: 251 QMLQFQDERLVAIAVLLEPMQKIIDMTIDYTRQRRVFDGTILDNQIVHYRLAELQTDIEA 310

Query: 369 ATALSFR 375
             +L +R
Sbjct: 311 VRSLLYR 317


>gi|332261789|ref|XP_003279949.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 498

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 57  LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 116

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 117 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGDG 169

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 170 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 229

Query: 366 IAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 230 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 282

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 283 YTRDYPYERILRDT 296


>gi|254514065|ref|ZP_05126126.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676308|gb|EED32673.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 391

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 81/394 (20%), Positives = 159/394 (40%), Gaps = 62/394 (15%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLM 152
           ++V F  A+   L   I    H   W  +   +V ++A +    R +LM   E   G + 
Sbjct: 9   EQVMFRDAYRKFLSSEIVP--HMESWREA--GIVDREAFRKAGERGFLMVWPEEKYGGMG 64

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-----TNKAPMQK-------TSVAIGL 200
            P      ++   T      DW   + SR   P       +   Q+           + +
Sbjct: 65  DPDFRFEQVIIEETAYARVGDWYSTLHSRLVGPYFTRFGTEEQCQRFLPGCASGETILAI 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGR-----V 253
            +TE   G+D+A + S    + +G  + L+G K ++S+ + +D  I+ A+ +       +
Sbjct: 125 AMTEPDAGSDLAGMRSTA--VEEGEHWVLNGSKTYISNGINADVVIVAAKTDPENNPHAM 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-- 309
             F+V R +E        ++R +N  K+G ++  T EL F+        D+ +    V  
Sbjct: 183 TLFIVERGMEG-------FERGRNLEKMGMKAQDTAELFFN--------DVRIPKANVLG 227

Query: 310 EDMKILIYLDSAIMS---------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           E  K  IYL   +           ++  ++S      Y + R   G  L      +  +A
Sbjct: 228 EPHKGFIYLMEGLAEERLIGACGYLAAAQLSWDLTCAYVKERKAFGKPLAAFQNTQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  D+  A     +   +F+  +  + +AA A++   +T     K+A       ++  G
Sbjct: 288 ELRTDLDIAQNYVDQCVAAFNAGQLNAVDAAKAKL---VTSELQVKVADI----GVQLHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           G+GY++E  I+R + ++   ++  GS   M + V
Sbjct: 341 GAGYMDEYPISRQFTDAKIATVYAGSSEVMKIIV 374


>gi|16127317|ref|NP_421881.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13424741|gb|AAK25049.1| acyl-CoA dehydrogenase, putative [Caulobacter crescentus CB15]
          Length = 564

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 130/337 (38%), Gaps = 41/337 (12%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  G L + S  +  ++    T    + W P+I S E  PT                T
Sbjct: 252 AWIGVGSLATRSEIAGELILTGGTDAQKEYWLPRIASAEILPTAV-------------FT 298

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+ A+ ++ +   D  Y ++G+K W   +  +D   +L + +     +    +L
Sbjct: 299 EPNTGSDLGALRTRAELKGDS-YVVTGNKTWITHAARADVMTLLVRTDPATTDYRGLSML 357

Query: 263 EDGSPNGLCYQRLKNK---------IGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311
               P G        +         IG R     EL F    GF +   N+  G      
Sbjct: 358 LAPKPRGTDEAPFPAEGMSGGEIGVIGYRGMKEYELGFD---GFTVPAENLLGGVTGQGF 414

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +++   +SA +  +   V +A+A     + YA  R   G  + D P +   +A +A +I
Sbjct: 415 KQLMATFESARIQTAARAVGVAQAALEVGLSYALDRKQFGQPIFDFPRVHNKLAMMAAEI 474

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L++  A+  DE K    EA  A+++A    +            A++  GG+G+  
Sbjct: 475 MGVRQLTYFAAHQKDEGKRCDLEAGMAKLIAARVAWAAAD-------NALQIHGGNGFAM 527

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           E + +R   ++   +I  G+G      +   L  G N
Sbjct: 528 EYAASRLLADARILNIFEGAGEIQAQVIARRLLDGGN 564


>gi|119961259|ref|YP_946753.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119948118|gb|ABM07029.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 408

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 31/277 (11%)

Query: 171 HKDWAPKI--FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            K+W PK+  FS +   +   P   + +A GL  T  R   ++            G + L
Sbjct: 128 QKEWMPKVIDFSLKGVFSLTEPEHGSDIAGGLSTTTARFEANL----------DGGTWVL 177

Query: 229 SGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            G K W   +  +D   + A+   +G+V  FLV R     +  G+  +++  K   R   
Sbjct: 178 DGAKRWIGGASTADVLCVFARDVADGQVKAFLVDR-----TAAGVTLEKIHGKTSLRMMQ 232

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
              +   N        L ++N S   V  M   +  D A ++      +   A+ Y + R
Sbjct: 233 NAHITLDNVRVPEAMRLHNVN-SFKDVAAMLRAMRSDVAWIATGIQAGAFEAALAYVKER 291

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    +++  +A +  +I A+ +L  RL         R +++A A++   +   
Sbjct: 292 QQFGRSLGSYQLVQEKLARMLGNITASLSLVVRLTEQQAWGIYRDQDSALAKMQTSL--- 348

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               M    +A A E +GG+G      +AR + ++ A
Sbjct: 349 ----MMRETVALAREVVGGNGITLAADVARFHADAEA 381


>gi|241763352|ref|ZP_04761408.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367504|gb|EER61803.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 550

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 120/312 (38%), Gaps = 52/312 (16%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A + AG L + S  +A ++    T     +W PKI S E  PT                T
Sbjct: 237 AWIAAGSLGTRSEIAAELIGCGGTAAQKSEWLPKIASGEVLPTAV-------------FT 283

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------GRVGCF 256
           E   G+D+ A+ ++  +++ G + + G+K W   +  SD   +L + E        +  F
Sbjct: 284 EPDTGSDLGALRTRATQVTGGGWRIDGNKTWITHASRSDLMTLLTRTEPGSTDHNGLSMF 343

Query: 257 LVPRLLEDGSPNGLCYQRLKNK---------IGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           L P+      P G   Q              +G R     +L F    GF +G   +  G
Sbjct: 344 LAPK------PRGTKAQPFPASGMSGGEIPVLGYRGMKEYDLAFD---GFEVGAEGLLGG 394

Query: 308 PVED--MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
                  +++   + A +  +   V +A      A  YA  R   G  +I+ P   R   
Sbjct: 395 VRGQGFRQLMQTFEGARIQTAARAVGVAWRAFDLAWRYANDRKQFGAPIIEFP---RVAD 451

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +AL I A T L   L++   E K R        + A + K    ++A +     ++  G
Sbjct: 452 KLALMI-AETVLVRELSHFAAEEKDRG---IRCDVEAGMAKLLAARVAWSNADNGLQIHG 507

Query: 421 GSGYIEERSIAR 432
           G+GY  E  I+R
Sbjct: 508 GNGYALEFEISR 519


>gi|119713426|gb|ABL97488.1| putative acyl-CoA dehydrogenase [uncultured marine bacterium
           HF130_81H07]
          Length = 365

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +     ++ PKI S E             +  G+G++E  G  + A I     K 
Sbjct: 99  INLGGSEEQKNNYLPKIASNE-------------LRFGIGMSEFVGAREDAGIEFSKNK- 144

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                 L+G   F+    +  FI+LA   G +  FL+     +    G+   +L      
Sbjct: 145 ------LNGRALFVLDAENSDFIILANKSGNI--FLI-----NAKDKGVKINKLTTVDKT 191

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           RS   + LE  N     L + N  ++   ++  +I++  D+    V      + +A+ Y+
Sbjct: 192 RSFHEILLENVNAEILALTEDNNEIAKKVIDAGRIILAADT----VGASEAMVEKAVTYS 247

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R      +     +K   A++A D+    +L ++ A SFD     +EE + +R++A  
Sbjct: 248 KERKQFNRTIGSFQAVKHMCAEMAADLEPCYSLVWQAAYSFD-----TEEVSSSRLLACQ 302

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +K    ++   +  +A E  GG G+ +   +   ++    N  +LG+
Sbjct: 303 SKSHTSEVGKMISKKATEVHGGMGFTDLLGLHYWFKRIGLNRQILGA 349


>gi|56420276|ref|YP_147594.1| short chain-specific acyl-CoA dehydrogenase [Geobacillus
           kaustophilus HTA426]
 gi|56380118|dbj|BAD76026.1| short chain-specific acyl-CoA dehydrogenase [Geobacillus
           kaustophilus HTA426]
          Length = 392

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 37/230 (16%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + L G K F S +P  D  ++ A +E GRVG FLVP      S +G+  +   N +G 
Sbjct: 153 GRWVLRGRKTFASLAPALDYVLISATMEDGRVGEFLVPM-----SASGIRIEPTWNTLGM 207

Query: 282 RSNATVELEFSNT------FGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSL 332
           R+  + +L               LG+ N    P +   + +   YL  AI + +      
Sbjct: 208 RATRSDDLVLEEVEVDQEALVETLGEAN-EAAPAQGWLLHVPACYLGIAIAARN------ 260

Query: 333 AEAIHYAR--RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---- 386
            EA+ +A+  + +     +   P ++R IA++   +  A    + +A+ +D    +    
Sbjct: 261 -EALRFAKTYQPNTLPHPIALTPEVQRKIAEMEWRLTHARHFLYAVADLWDRYPEKRMAM 319

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EE A A+++A  T       A  V+  AM  +GG     +  + RHYR+
Sbjct: 320 KEELATAKLVATNT-------ALEVVDWAMRIVGGQSLFADNPLQRHYRD 362


>gi|224371050|ref|YP_002605214.1| Acd13 [Desulfobacterium autotrophicum HRM2]
 gi|223693767|gb|ACN17050.1| Acd13 [Desulfobacterium autotrophicum HRM2]
          Length = 414

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 41/248 (16%)

Query: 226 YCLSGHK--WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLL---EDGSPNGLCYQRL 275
           Y ++G K  W   +P +   ++  Q++  +G      F+VP  L   + G+P        
Sbjct: 175 YVINGQKAAWVSGAPYASHALLFCQIDPSMGHAGGGIFIVPLDLPGVKRGAP-------- 226

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP--VEDM-KILIYLDSAIMSVSGM- 328
             K+G R +   EL F N      +L+       GP   E M +I++   +A+M      
Sbjct: 227 LEKMGQRDDPQGELYFDNVRVPANYLV------AGPEAYEVMLEIILSATTALMGTCATG 280

Query: 329 --RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +  EA+ YA+ R   G  LI+   +++ +  +   +     L+  +        + 
Sbjct: 281 IGRAAFEEALEYAKNRVQCGKALIEHQDVQKKLFKMFSKVEMTRQLTRSVLEYNQNTSTP 340

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +EE +       I K + C+ A  +  +A++  GG+G   E  + + +R+  A S+++  
Sbjct: 341 AEEYSV------IGKVFGCQYAFEIANDAVQIFGGNGLTREYIVEKLFRD--ARSMMIED 392

Query: 447 GNAMVLDV 454
           G   VL +
Sbjct: 393 GANDVLAI 400


>gi|187921241|ref|YP_001890273.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187719679|gb|ACD20902.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 387

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTKIKTTAERRGD-RYVINGQKVWISRVQHSDLMILLARTTPLADVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L +   +G+  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFIVD--LREAIGHGMTVQPILNMVNHETN---ELFFDNLEIPAENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   YA+ R V G  +     
Sbjct: 235 FKYILDGLNAE-------RTLI----AAECIGDGYWFVDKVTEYAKERVVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + F  A  FD  +    +A  A+++A          A A    
Sbjct: 284 VQFPIARSFVNVEAASLMRFEAARRFDAHQPCGAQANMAKLLA----------ADASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 334 ANACLQFHGGFGFACEYDVERKFRET 359


>gi|325001171|ref|ZP_08122283.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 380

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 23/248 (9%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCF 256
             L+E  GG+D+A  + +  ++  D        +W  +   +D  ++ A+   +  V  F
Sbjct: 135 FALSEPHGGSDVAGGLETTAERDGDAWVLNGAKRWIGNGTFADLVVVWARDVADDAVKGF 194

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V + +      G    +++ K+  RS    +L F+   G  + + N   G         
Sbjct: 195 VVEKDMP-----GFAATKMEGKLALRSVQNADLTFT---GVRVPEANRLPGAQSFADTNR 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATA 371
            L      V+   V     ++   R +    +   QP+     ++  +  I  ++ A+  
Sbjct: 247 VLRVTRGGVAWNAVGAMAGVYELARDYAVDRVQFGQPIAAFQLVQDHLVSILGNVTASLG 306

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ R+A   D+   R E+AA A+  A +       M    +A A E  GG+G + E  + 
Sbjct: 307 MAVRIAQMQDDGTFRDEQAALAKRQATL-------MLRDSVARAREVFGGNGILLENKVG 359

Query: 432 RHYRESPA 439
           R + ++ A
Sbjct: 360 RFFNDAEA 367


>gi|331695551|ref|YP_004331790.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326950240|gb|AEA23937.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 385

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 26/136 (19%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++  A+++A   TP   + W P                  S+ +   +TE   G++
Sbjct: 87  VVSPAIV-ATVIATSGTPAQKERWLPG-------------FADGSLRMSFAITEPDAGSN 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLLE 263
              IT+  ++  DG + LSGHK+++S    +DA +++A++E       R   F+VPR   
Sbjct: 133 SHRITTTARRDPDGGWRLSGHKYYISGVDETDATLVVARMEDAASGTLRPAMFVVPR--- 189

Query: 264 DGSPNGLCYQRLKNKI 279
                G+ YQ +   I
Sbjct: 190 --DTPGVSYQPIDMAI 203


>gi|15789629|ref|NP_279453.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10579989|gb|AAG18933.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 456

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 27/259 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+       GL ++E   G+++A + +  ++  D  Y L+G K+++ + +   ++ +   
Sbjct: 188 PVANNDQLTGLAVSEPEVGSNLAGMQTTAERDGDE-YVLNGEKYWIGNGVEADWVTVYAK 246

Query: 250 EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            G           F VP        +G   + +  K+G R++    +   +        +
Sbjct: 247 TGDTDDRYMNYSLFAVPT-----DTDGYEAEHIPEKMGMRASKQAHIVLDDCRVPEANLI 301

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357
               G    M +  + +   + V+G  + LA     EA  +   R   G  + D   ++ 
Sbjct: 302 GTEGGGF--MMLTDFFNHGRVVVAGHGLGLAAAAFEEAWDFVHDRAGFGRTVSDFQSVQH 359

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           ++AD+ ++  +A AL++R A    E  +  +E     + A + K    ++A A   + M+
Sbjct: 360 SLADMRIEFESARALAYRAA----EKVAAHDEPG---LWAAMAKTKATEVATANAEQGMQ 412

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG     +R IAR YR+
Sbjct: 413 FHGGRSNFTDRRIARVYRD 431


>gi|118462902|ref|YP_880582.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118164189|gb|ABK65086.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 394

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 22/236 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------- 247
           +V   +G +E   G+D+A++ +   ++ D  Y ++G K F S      +I LA       
Sbjct: 119 TVEFAIGYSEPGAGSDLASVHTTAVRVGDE-YVINGQKMFTSGAAYADYIWLAVRTDPDA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +    +   +VP      S  G  +Q L    G  +  T   +       L+G  N    
Sbjct: 178 KKHKGISILIVPT-----SSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQ 232

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     L +  +A+ ++  +     + + +A    + GG +IDQP ++ A+A +   +A
Sbjct: 233 LITTQ--LNFERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVA 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           A   ++ R+  +  +      EA+ A++          ++   V  E +E + G+G
Sbjct: 291 AYKLVNLRVNAAMTKGALNMGEASAAKVFG-------TELTQQVARELLEVLDGNG 339


>gi|34762277|ref|ZP_00143282.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742636|ref|ZP_04573117.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|256846030|ref|ZP_05551488.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|27888063|gb|EAA25125.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430284|gb|EEO40496.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|256719589|gb|EEU33144.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 30/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D +A   +   + DG  Y L+G K F+++    +F  +  + +   G   + 
Sbjct: 123 LTEPGAGSDASA--GRTTAVKDGNEYVLNGRKCFITNGAVASFYCITAITDKEKGLKGIS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKI 314
               +    GL     ++K+G R+        SNT   +L D  +    +     E   I
Sbjct: 181 MFFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVVLEDCRIPASALVGKEGEGFAI 232

Query: 315 -LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD A   +  + V +A     EAI Y + R   G  +I    ++  IAD+ +    
Sbjct: 233 AMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKNQALQFKIADMEIKTET 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +        D      +E+A       I K +   +A  V +EA++ +GG GY  E 
Sbjct: 293 ARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVSSEAIQMLGGYGYSREY 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            + +  R+S    I  G+     + + N
Sbjct: 346 PVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|169630568|ref|YP_001704217.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242535|emb|CAM63563.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 403

 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 39/268 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++   K+    Y ++G K F+++      I+    L + +GR  +
Sbjct: 133 MAITEPGFGSDSAAVSTTA-KLDGDEYVINGEKIFVTAGSRATHIVVWATLDKTKGRPAI 191

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST---- 306
             FLVPR        G+  +RL+ K+G +++ T  + F N      ++L D  ++T    
Sbjct: 192 KSFLVPR-----EHPGVTIERLEEKLGIKASDTAVIRFDNARIPKDYILSDPEINTEKGF 246

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQPVMKRAIAD-- 361
           G V     +   D+    V+ M V ++ A +   R+     GI I  D+P   +  A   
Sbjct: 247 GGV-----MSTFDNTRPIVAAMAVGVSRASLEELRKILEDAGIEISYDRPAHAQHAAAAE 301

Query: 362 ---IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
              +  D  ++  L+ R A   D     S EA+ A+  A        ++   +  +A+E 
Sbjct: 302 FLRMEADWESSYLLTLRSAWQADNNVPNSMEASMAKAKA-------GRVGSDITLKAVEM 354

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            G +GY E   + +  R+S    I  G+
Sbjct: 355 AGTTGYSERTLLEKWGRDSKILDIFEGT 382


>gi|149487417|ref|XP_001519414.1| PREDICTED: similar to LOC494679 protein, partial [Ornithorhynchus
           anatinus]
          Length = 102

 Score = 43.1 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +A  + A   L++  A   +  +   +EA  A       KY+  ++A    ++
Sbjct: 2   LQHQIAQVATQLEATRLLTYNAARLAEAGRPFIKEACMA-------KYYASEVAALTTSK 54

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E +GG GY+++  I ++YR++   +I  G+ N  +  +  LL
Sbjct: 55  CVEWMGGVGYMKDYPIEKYYRDAKIGAIYEGTSNIQLSTIAKLL 98


>gi|41408683|ref|NP_961519.1| FadE26_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397041|gb|AAS04902.1| FadE26_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 394

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 22/236 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------- 247
           +V   +G +E   G+D+A++ +   ++ D  Y ++G K F S      +I LA       
Sbjct: 119 TVEFAIGYSEPGAGSDLASVHTTAVRVGDE-YVINGQKMFTSGAAYADYIWLAVRTDPDA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +    +   +VP      S  G  +Q L    G  +  T   +       L+G  N    
Sbjct: 178 KKHKGISILIVPT-----SSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQ 232

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     L +  +A+ ++  +     + + +A    + GG +IDQP ++ A+A +   +A
Sbjct: 233 LITTQ--LNFERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVA 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           A   ++ R+  +  +      EA+ A++          ++   V  E +E + G+G
Sbjct: 291 AYKLVNLRVNAAMTKGALNMGEASAAKVFG-------TELTQQVARELLEVLDGNG 339


>gi|84501929|ref|ZP_01000087.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389924|gb|EAQ02558.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 391

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 33/271 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           I + ++E   G+ +  + +   K  DG + L+G+K W   + ++D  ++  +     G  
Sbjct: 120 IAIAISEPEAGSAVTDLRTTATKDGDG-WVLNGNKCWSTGAHVADYALVFCRFGKASGAK 178

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKI 314
            +   + D    G     +  K+G R     E+   N   +  G  D+ V   P      
Sbjct: 179 GIGAFVVDLKKPGARIGHISLKMGGRGLTEAEIILEN---YKAGPEDVLVEGDPESSRSF 235

Query: 315 LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + + S        A M V   + +   A  Y+  RH  G  + +   ++  IAD+A  +
Sbjct: 236 ALLMSSFGPERVGNAAMCVGLAQGAFDAAKAYSEIRHQFGRPIKEFQGLQWKIADMATQV 295

Query: 367 AAATALSFRLA-----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            AA  + +R A     N F +            + A + K +  +MA  V  EA++  G 
Sbjct: 296 HAARLMVYRAATNPAPNGFPDP-----------MDATMAKLYANEMAQKVTNEALQIHGH 344

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +GY  E  + R  R+  A    LG G   +L
Sbjct: 345 NGYTREYPLERMVRD--ARGFALGGGTVEIL 373


>gi|254774215|ref|ZP_05215731.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 394

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 22/236 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------- 247
           +V   +G +E   G+D+A++ +   ++ D  Y ++G K F S      +I LA       
Sbjct: 119 TVEFAIGYSEPGAGSDLASVHTTAVRVGDE-YVINGQKMFTSGAAYADYIWLAVRTDPDA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +    +   +VP      S  G  +Q L    G  +  T   +       L+G  N    
Sbjct: 178 KKHKGISILIVPT-----SSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQ 232

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     L +  +A+ ++  +     + + +A    + GG +IDQP ++ A+A +   +A
Sbjct: 233 LITTQ--LNFERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVA 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           A   ++ R+  +  +      EA+ A++          ++   V  E +E + G+G
Sbjct: 291 AYKLVNLRVNAAMTKGALNMGEASAAKVFG-------TELTQQVARELLEVLDGNG 339


>gi|289583061|ref|YP_003481527.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532614|gb|ADD06965.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 414

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 60/250 (24%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNK 278
           + ++G K ++++ P +D  ++ A+  G  G      CFLV    E  +P G     +   
Sbjct: 183 WVINGQKVYITNGPYADFAMVFARTSGEDGDLHGITCFLV----EADNP-GFEVGTIHRS 237

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD---SAIMS-VSGMRVSLAE 334
           +G       EL F +               V + +IL  +D   +A MS + G R+++A 
Sbjct: 238 MGMTPGQHAELHFDDC-------------RVGEDQILGEVDQGFTAAMSWIGGGRINIAA 284

Query: 335 ------------AIHYARRRHVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLA 377
                       ++ YAR R        D+P+  R      +AD+A DI     L    A
Sbjct: 285 NSVGTAQYLLDMSVEYARDRET-----FDKPIGHRQGVSFQLADLATDIEQTRQLYRYAA 339

Query: 378 NSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              D   ++R EE+        + K    ++A      AM+  GG+GY++E  I R+YR 
Sbjct: 340 WKMDNGDRARKEES--------MAKLRGAELANKAADIAMQVHGGAGYMKELPIERNYRS 391

Query: 437 SPANSILLGS 446
           +    I  G+
Sbjct: 392 ARVFRIFEGT 401


>gi|148559146|ref|YP_001258066.1| isovaleryl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|148370403|gb|ABQ60382.1| isovaleryl-CoA dehydrogenase [Brucella ovis ATCC 25840]
          Length = 382

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+ ++    +K  D  
Sbjct: 103 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 147

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 148 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 207

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 208 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 263

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 264 YVHERK-----QFDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRDETTRKDAAG 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 319 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 369

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 370 RML----IGRELFQE 380


>gi|257791596|ref|YP_003182202.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317487991|ref|ZP_07946573.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475493|gb|ACV55813.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912893|gb|EFV34420.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 382

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/266 (20%), Positives = 111/266 (41%), Gaps = 25/266 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------G 251
             L ++E   G+D   + +  + + + +  L+G K ++++     +IM+A ++      G
Sbjct: 119 FALAISEPEAGSDAMNMQTYTRTVDEHL-ILNGRKTYVNNGEYAPYIMVAAIDRDCEAPG 177

Query: 252 R---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           +   +  +L+PR L+  S   +      NKIG        L F N        LN     
Sbjct: 178 KYPPMTFWLLPRDLKGVSAYPI------NKIGQSMLPFATLVFDNVELSPAYRLNGRQEG 231

Query: 309 VEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  L+         S +   R ++ +A+ +AR R   G  +     +++ + D+ + 
Sbjct: 232 FRQLFRLLEFGRVFTCASSLGMARAAMEDAVAHARSRKAFGVQIGRFQQIEQMLTDMEVS 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I   +++ +R A + D            R+   + K +    A  V + AM+ +GG GY 
Sbjct: 292 IYNMSSMLYRAALAVDNGGPDE------RLSVALMKRYVPDAATEVASSAMQILGGMGYT 345

Query: 426 EERSIARHYRESPANSILLGSGNAMV 451
           E   +++ +++   N I  G+   MV
Sbjct: 346 EGARVSQLWQDCRGNQIAEGTDQIMV 371


>gi|145596835|ref|YP_001161132.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145306172|gb|ABP56754.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 388

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 39/280 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A + +  ++  D  Y ++G K +++S     F+  A   G      + 
Sbjct: 133 LAVTEPGGGSDVAGLRTTARRDGD-HYLVNGAKAYITSGHRADFVTTAVRTGGSDAGGIS 191

Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            L +E G+P G    R   K+G   + T EL F+        D+ V        +   +L
Sbjct: 192 LLVIEKGTP-GFTVGRRMEKLGWHCSDTAELSFA--------DVRVPVANRVGAENTGFL 242

Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            S + + +  R+SLA             A+ + R R   G  L+ + V++  +A+  L  
Sbjct: 243 -SIMQNFAAERISLATQAYATAQRCVELALSWCRDRETFGRPLVGRQVVRHRLAE--LHT 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE--AMECIGGSGY 424
            A +A S+ L  +   A   +E       M  +       +A        A++  GG GY
Sbjct: 300 RAESARSYVLDVATRVAAGEAE-------MTEVAMAKNAAVAACAEVVDGALQLHGGFGY 352

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + +  + RHYR+      +LG G      +  ++ KG  L
Sbjct: 353 LRDAEVERHYRDQR----ILGIGGGTTEIMNEIIAKGMGL 388


>gi|302533113|ref|ZP_07285455.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442008|gb|EFL13824.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 409

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R   S+  
Sbjct: 274 MAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMRTQIDAARLLVWRA--SWMA 331

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R     +      ++K +  ++A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 332 VAGRP----FTSAEGSMSKLFASEVAKKVTAQAVQILGGNGFTREYPVERMHRDAAIYTI 387

Query: 443 LLGS 446
             G+
Sbjct: 388 FEGT 391


>gi|311106362|ref|YP_003979215.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761051|gb|ADP16500.1| acyl-CoA dehydrogenase, N-terminal domain protein 9 [Achromobacter
           xylosoxidans A8]
          Length = 383

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 29/240 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I +G+TE   G+ +  + +   + +DG + ++G K F ++    A ++L  V    G   
Sbjct: 121 ISVGMTEPDAGSAVTELKTSATR-ADGGWRINGTKIF-TTHGPHASVILTYVRFGPGTGG 178

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRS-----NATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  +L D    G+       K+G RS        VE+ F N F   + D  V  G     
Sbjct: 179 IGSVLIDTKAQGV-------KLGKRSAFMSGEEWVEIFFDNVF---VADDMVVLGEGGFK 228

Query: 313 KILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           K +   +     +   S++  R +  EA ++A +R   G +L +   ++   AD+ + + 
Sbjct: 229 KQIAGFNVERIGNTARSLALGRYAYEEARNWAMQRKQFGRLLCEFQGLQWKFADMRIKLD 288

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R A++ D     + E A       I K +C ++   V  +A++ +GG GY  E
Sbjct: 289 AAQLLLYRAASAADTGFPSATETA-------IAKAYCNQVGFDVANDALQVLGGLGYSRE 341


>gi|209885194|ref|YP_002289051.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
 gi|209873390|gb|ACI93186.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
          Length = 395

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 45/299 (15%)

Query: 198 IGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVG 254
           IG G +TE   G+++  + ++  +  +G + LSG K F+S + ++D   +LA+  E   G
Sbjct: 122 IGCGAVTEPGTGSNVRQLRTRAVRDGEG-WRLSGEKMFISNATVADISTVLARTGENEFG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
            F++ R +       L       K+G    +   +   N +    F LGD   ++G  E 
Sbjct: 181 IFILDRSVHKFESGEL------EKLGLNGWSFGSITLDNVYIGDEFRLGD--GTSGLSEA 232

Query: 312 MKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M       +  A++S    R +L +AI YA  R   G  +    ++++ +AD+A +  A 
Sbjct: 233 MSGFERARAWVAVISSGIARAALDDAIRYATERDQFGVPIATHQLVQQLLADMACETEAM 292

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+++   + D A  R +      +   + K +  + A  V + A++  G  G   E  
Sbjct: 293 QLLTYKALAALD-AGGRCD------LPTSMAKVYASEAAVRVASRAIQVHGACGVTREFP 345

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL-----FSTLEQDLGSSGKKV 483
           + RH+R            NA +L + +    GT    QL      + +   LG++G+K 
Sbjct: 346 VERHFR------------NARMLTIPD----GTTQINQLIIGRELTEIPAFLGAAGRKT 388


>gi|120402904|ref|YP_952733.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955722|gb|ABM12727.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 460

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A+ +   +   G Y L G K  + +   ++ FI+ AQ+ G+   F+V     + S  
Sbjct: 231 DPTALKTTAVRTPSG-YRLDGVKSLVPAAADAEVFIIAAQLNGKPALFIV-----EASTK 284

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL        +G R+ A   +E       L   LG+ + +     +   L  L  A ++V
Sbjct: 285 GLTVTP-DPSMGIRAAALGRVELDKVTVPLSARLGEEDATDADYSEAIALSRLGWAALAV 343

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 L   I Y + R   G  +  +  +    A+IA+++     +++R A   D+  S
Sbjct: 344 GTSHAVLDYVIPYVKERTAFGEPIAHRQSVAFMCANIAIELDGLRLITWRGAARADQGMS 403

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + EAA A+ +           A  +  + ++ +GG GY +E  + R YR+
Sbjct: 404 FAREAALAKKLG-------SDKAMQIGLDGVQLLGGHGYTKEHPVERWYRD 447


>gi|323163454|gb|EFZ49280.1| acyl-CoA dehydrogenase, C-terminal domain protein [Escherichia coli
           E128010]
          Length = 165

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 13/152 (8%)

Query: 286 TVELEFSNTFGFL-LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            VE+E S+  G   +G LNV      +M+ LI   +A  S      +  +A  YA +R  
Sbjct: 11  NVEVEESDMVGEEGMGFLNVMYNF--EMERLI---NAARSTGFAECAFEDAARYANQRIA 65

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    +++  +A +A+ I     +  ++A   D+ +S        R  A + K +C
Sbjct: 66  FGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQS-------LRTSAALAKLYC 118

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + A  VI +A++ +GG GY +E  ++R +R+
Sbjct: 119 ARTAMEVIDDAIQIMGGLGYTDEARVSRFWRD 150


>gi|126663963|ref|ZP_01734957.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126623912|gb|EAZ94606.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 596

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 47/276 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  ++   +  I+ A++E    +  F+
Sbjct: 147 LTEPGAGSDANSGKTKAVLSEDGTHYKITGGKMWISNAGFCNLMIVFARIEDDKNITGFI 206

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V    E+   NG+     ++K+G RS++T ++ F+ T    +   N+  G  E  KI   
Sbjct: 207 V----ENDPSNGISMGDEEHKLGIRSSSTRQVFFNET---KVPVENMLAGRGEGFKI--- 256

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPV-----MKRAIADIALD 365
              A+ +++  R+ LA A   A+RR V+G        +    P+     ++  IA++A +
Sbjct: 257 ---AMNALNVGRIKLAAACLEAQRRTVTGAVHYANERVQFKTPISSFGAIQAKIAEMATN 313

Query: 366 IAAATALSFRLA--------------NSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPA 410
             A  + ++R A              NS  EA+ +  EE A   I   I K    +   +
Sbjct: 314 AYAGESATYRAASDIENRINIRVNEGNSHQEAELKGVEEFA---IECSILKVAVSEDVQS 370

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              E ++  GG G+ E+  +   +R++    I  G+
Sbjct: 371 CTDEGIQIFGGMGFSEDAPMESAWRDARIARIYEGT 406


>gi|119718281|ref|YP_925246.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538942|gb|ABL83559.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D  A+  + + + DG  + L+G K W  ++  S+ + ++A  +       + 
Sbjct: 128 LSEPDAGSD--AVGMKARAVRDGDTWVLNGVKRWITNAGESEYYTVMAVTDPEKRSRGIS 185

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             + + S  G+ +   + K+G + + T E+   N    +  D  +          +  LD
Sbjct: 186 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVR--IGADRMIGAEGAGFEIAMRTLD 243

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++++   V +A+     A+ YA+ R   G  + D   ++  +AD+ + + AA  L++
Sbjct: 244 HTRVTIAAQAVGIAQGALDYALGYAQERKQFGKPISDFQGLQFLLADMGMKVEAARQLTY 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   +   S               K +   +A  V   A++ +GG GY  +  + R  
Sbjct: 304 AAAGKSERGDSD------LTFFGAAAKCFASDVAMEVTTNAVQVLGGYGYTRDYPVERMM 357

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 358 RDAKITQIYEGT 369


>gi|154282877|ref|XP_001542234.1| hypothetical protein HCAG_02405 [Ajellomyces capsulatus NAm1]
 gi|150410414|gb|EDN05802.1| hypothetical protein HCAG_02405 [Ajellomyces capsulatus NAm1]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  +A    +IAAA AL +  A   +  +   ++AA A++       +  ++A  V   
Sbjct: 134 MQHQVAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGS 186

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A+E +GG G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 187 AVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 232


>gi|118469492|ref|YP_888400.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170779|gb|ABK71675.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 407

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           LG+TE   G+D++++T+   + +DG + ++G K F+++   +D  I  A ++   G   +
Sbjct: 148 LGITEPDAGSDVSSLTTTATRTADG-WSVNGQKTFITTGDRADIIICFATIDRAAGRNGI 206

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
              + DG  +G+ +     K+G   ++T EL F +
Sbjct: 207 TAFVVDGRWDGVGHGTPFEKMGMHGSSTAELFFDS 241


>gi|116622186|ref|YP_824342.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116225348|gb|ABJ84057.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 562

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 124/336 (36%), Gaps = 68/336 (20%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +  TP   K W  +I              +  +    G TE   G+D+ A+ +   ++
Sbjct: 99  ITVGATPEQKKIWLSRI-------------AEEGILFAYGATEPDAGSDLGALQTTADRV 145

Query: 222 SDGI----YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            +G     Y ++G K W  +  ++DA+ +LA        F+V R        G    R +
Sbjct: 146 LEGERVVGYRINGSKQWISNGGIADAYTVLANTPTGPSWFIVDR-----GAQGFTQGRPE 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K G R + T  L F++                    + +  D  +  V G  +  A+A+
Sbjct: 201 DKHGIRLSNTAALSFTD--------------------VTVPADRLVGGVEGQGLLQAQAV 240

Query: 337 H-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAKSR 386
             Y R    + G+      + RAI   A  I A T LS +   +           EA   
Sbjct: 241 FGYTRLMVAAFGLGAGWAALDRAIPYSAKRIQAGTPLSEKQGYTHKLIVPHVVRLEAARA 300

Query: 387 SEEAAYARIMA---------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           S E   ARI A          I KY   +   A    A++ +GG GY  E  + +  R+ 
Sbjct: 301 SIEETAARIDAGEGSLNTEGAIAKYMATEAGNAAAEAAIQALGGYGYTHEYLVEKISRDV 360

Query: 438 PANSILLGSGNAMVLDV------LNLLEKGTNLFEQ 467
               I  G+   M + +      L+L  +G +  +Q
Sbjct: 361 RITIIYEGTSEIMEMTISRDRWQLHLKTRGKHYHDQ 396


>gi|288965957|gb|ADC79623.1| BafD [Streptomyces lohii]
          Length = 363

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G +E   G+D+AA+T+  ++  D +      KW  ++  +D  +++ + E      +VP
Sbjct: 105 VGFSEPGAGSDLAAMTTTVRRDGDTVVVDGHKKWVTAAHYADLLVVVGRHEDGAVAVVVP 164

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
                G+P G+  +R+ N +G R+    ++         G +LG   + T     + +  
Sbjct: 165 ----TGTP-GVRVERITNPLGCRAAGHADVHLDGVRLPAGSVLGGHGLPTA----LLVTT 215

Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    MSV+      +R  LA A  +A  R   G  L +  ++   IAD+      AT 
Sbjct: 216 ALAYGRMSVAWGCVGILRACLAAATAHAAGREQFGRPLAEHQLVAGHIADLYTAEQVATR 275

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +       +DE    S +   A ++A   K+     A    A A++ +  +G  +  ++A
Sbjct: 276 VCEYAGRCWDEG---SPDQVVATVLA---KHVSATQAARGAATAVQVLASAGSRDGHTVA 329

Query: 432 RHYRESPANSILLGS 446
           R YR++    I+ GS
Sbjct: 330 RAYRDAKLMEIIEGS 344


>gi|242768477|ref|XP_002341577.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724773|gb|EED24190.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 443

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 53/305 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255
           + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G  G    
Sbjct: 160 IAITEPDAGSDVANITTVAEKSADGKEYVINGTKKWITNGIWAEYTTMAVRTGPPGSGAA 219

Query: 256 ----FLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                LVP     G    P  +C        GN ++ T  +E  +     + +L  + G 
Sbjct: 220 GLSLLLVPLKNYPGVSMRPIKVC--------GNETSGTTYIELDDVH-VPISNLIGAEG- 269

Query: 309 VEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              MK ++       L  A+      RV+L+ A  Y  +R      LI QPV++  +A  
Sbjct: 270 -AGMKYIMTNFNHERLSIAVGVTRQARVALSTAFEYVLKREAFSKPLIAQPVVRHRLAKA 328

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEA--------AYARIMAPITKYWCCKMAPAVIAE 414
             ++ + +A   +    F   K + E+A        A A+  A +    C +        
Sbjct: 329 GAELESLSAWIEQFL--FQMTKLKKEDADRELGGLTAMAKAKAGMVLNECSQT------- 379

Query: 415 AMECIGGSGYIEE---RSIARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQLFS 470
           A+   GG+G         I R YR+ P   I  GS + ++ L V  L++    ++E    
Sbjct: 380 AVLLFGGNGLTRTGRGELIERIYRDVPTARIPGGSEDVLLDLGVRQLVK----IYEAGIK 435

Query: 471 TLEQD 475
            LE+D
Sbjct: 436 RLERD 440


>gi|171680058|ref|XP_001904975.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939655|emb|CAP64882.1| unnamed protein product [Podospora anserina S mat+]
          Length = 446

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 119/301 (39%), Gaps = 52/301 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQV----EG 251
           I + +TE   G+D+A I +  +K  DG  Y ++G  KW  +   SD   M  +      G
Sbjct: 159 ICIAITEPEAGSDVAGIVTTAKKSPDGQHYIVNGTKKWITNGIWSDYASMAVRTGPPGSG 218

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G  L+   L++    G+  +RLK   G  S  T  +E        L D+ V   PVE+
Sbjct: 219 AAGISLLVVPLKNHP--GVNMRRLKVA-GQISAGTTFIE--------LDDVQV---PVEN 264

Query: 312 --------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                   MK ++       L  A  +    RV+L+ A  Y  +R   G  L++QPV++ 
Sbjct: 265 LIGKENHGMKYIMTNFNHERLAVATGTTRQARVALSAAFEYVMKREAFGKPLVEQPVVRH 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA--------AYARIMAPITKYWCCKMAP 409
            +A     + + TA     A  +   +  +EEA        A  +  A I    C   A 
Sbjct: 325 RLAKAGALLESLTAWVEHFA--YWMTRLPAEEADVKLGGMTALLKAQAGIVFRECADTAV 382

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM----VLDVLNLLEKGTNLF 465
            +         G G + E      YRE P   I  GS + +    V  +L + +  T + 
Sbjct: 383 LLFGGNGFTTTGQGMVAEML----YREVPGTRIPGGSEDVLLDLAVRQLLKIYQVQTKML 438

Query: 466 E 466
           E
Sbjct: 439 E 439


>gi|302561942|ref|ZP_07314284.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479560|gb|EFL42653.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 408

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA  R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYATTRQQFGRPIIDNQGVAFQLADMRTQIDAARLLVWRASWMAIN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+GY  E  + R +R++   +I
Sbjct: 333 GKP------FTAAEGSMSKLFASETAKKVTAQAIQILGGNGYTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|330834067|ref|YP_004408795.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329566206|gb|AEB94311.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL-VP 259
           LTE   G+D+ A+ +  ++  + +  +SG K F S+   S   ++LA+  G  G    + 
Sbjct: 122 LTEPGAGSDLGALQTTARQEGNEL-VISGEKIFTSAASFSSKMLVLARTSGNPGDRQGIS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKIL 315
            LL D    G+   +L + +G R      ++F+N        +  + +   G ++ + ++
Sbjct: 181 LLLVDSKTPGIEIHKL-DLMGIRGAGVSYVKFNNARVPKDSIVGKEGDAFRGAIKAL-MV 238

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A ++V   R ++ +A++ A  R   G  L++Q  +   +AD  + + A+  L+ R
Sbjct: 239 SRNGYAGIAVGIARGAVEDAVNRAASRKQFGKSLLEQEWISFNLADALVKVEASRLLTMR 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D+      EA+ A+ MA IT       A  V   A+   GG G      + R YR
Sbjct: 299 AAAMLDKGIEALTEASMAKYMAAIT-------AAEVSRTALHIFGGHGLNRGSKVERLYR 351

Query: 436 ESPANSILLGSGNAMVLDV 454
           ++    I  G+    ++ V
Sbjct: 352 DAKIMEIAEGTNEMQLIAV 370


>gi|254477398|ref|ZP_05090784.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031641|gb|EEB72476.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 387

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI--MLAQVEG----- 251
           L +TE   G+D+  + +  ++  D  + L+G K F+S + ++D  I  M   +E      
Sbjct: 123 LAMTEPDAGSDLRGMKATARQDGDD-WILNGTKHFISHADIADFAICFMATGIEDTPRGP 181

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V +    G+P G   +     + +R      LEF +       +LG+++   
Sbjct: 182 KKKITAFFVDK----GTP-GFEVRDGYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   +     +L  +I YA  R   G  +     +   +AD+AL++
Sbjct: 237 DVANTWLGATRLQVAATCLGRADRALQHSIDYAAERKQFGQQIGKFQGVSFKLADMALEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++     FD+      + + A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAANLLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAFVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + R +R++    I  G+
Sbjct: 350 ELPLERIWRDARVERIWEGT 369


>gi|296141000|ref|YP_003648243.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029134|gb|ADG79904.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 382

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 47/277 (16%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EG 251
           G GLTE   G+D A+ T+   K+    + ++G K F+++  +D   ++          +G
Sbjct: 120 GFGLTEPGCGSD-ASGTATTAKLDGDTWVINGSKQFITNSGTDITSLVTVTAVTGTTPDG 178

Query: 252 R--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           R  +   +VP     G+P G   +   NK+G  ++ T  L FS        D+ V   P 
Sbjct: 179 RKQISTIIVP----SGTP-GFTVEPAYNKVGWNASDTHPLSFS--------DVRV---PS 222

Query: 310 EDM---------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVM 355
           E++           L  LD   ++++ +        + E++ YA+ R+  G  + +   +
Sbjct: 223 ENLLGEEGRGYANFLSILDEGRIAIAAVATGAAQGCVDESVKYAKERNAFGKPIGEFQSI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             AIA +      +    +  A      K   +EAA A++++        +MA       
Sbjct: 283 AFAIARMEARAHTSRVAYYEAARLMLAGKPFKKEAAIAKMISSEAAMDNARMA------- 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +  GG G++ E  +ARHYR+S    I  G+    +L
Sbjct: 336 TQIHGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLL 372


>gi|113868557|ref|YP_727046.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527333|emb|CAJ93678.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 388

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 45/260 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  +K+  G Y +SG K W  ++ ++D  ++LA+          
Sbjct: 124 FGVTEPDAGLDTTKLKTFARKVPGG-YSVSGRKIWISTAQVADRMLLLART--------T 174

Query: 259 PRLLEDGSPNGLC--YQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
           P      S  GL   Y ++ ++KI  R    +     +T    + DL +   P ED    
Sbjct: 175 PLESVKKSTEGLSLFYTKVDRSKIEIREIDKMGRAAVDTNMLFIDDLFI---PEEDRIGE 231

Query: 313 ---------------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                          +ILI    A  ++   R +LA A  YA+ R V G  +     ++ 
Sbjct: 232 EGRGFEYILHGLNPERILI----AAEAIGLGRAALAIATQYAKERVVFGRPIGMNQGVQH 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A   + + +A  +  + A  +D  +S   EA  A+ +A    +  C+ A       + 
Sbjct: 288 PLAQAWMQLESANLMMLKAAARYDAGQSCGAEANTAKYLAAEAGHNACQTA-------IL 340

Query: 418 CIGGSGYIEERSIARHYRES 437
            +GG GY  E  + R  RES
Sbjct: 341 TLGGMGYSREYRVERLLRES 360


>gi|328713184|ref|XP_001949624.2| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 1 [Acyrthosiphon pisum]
 gi|328713186|ref|XP_003245012.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Acyrthosiphon pisum]
          Length = 633

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 62/310 (20%), Positives = 126/310 (40%), Gaps = 44/310 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ ++E+                  LTE   G+D  +I ++    
Sbjct: 169 ILLFGTPEQKAKYLPRVSNKEF--------------AAFCLTEPSSGSDAGSIRTRAVLS 214

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNG 269
            DG  + L+G+K W  +  M++   + AQ             +V  F+V R    G  N 
Sbjct: 215 PDGKHFVLNGNKIWISNGGMAEIMTVFAQTPVKDEKTGKTVDKVTAFIVERAF-GGVSNS 273

Query: 270 LCYQRLKNKIGNRSNAT---VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +++  K  N +  T   V++   N  G +     V+   + + +          ++S
Sbjct: 274 PPEKKMGIKASNTAEVTYEDVKIPIENVLGGVGQGFKVAMNILNNGRF-----GMAAALS 328

Query: 327 G-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           G MR   A+A+ +A  R   G  L     ++  +A +A+      ++++ ++ + D    
Sbjct: 329 GTMRSVTAKAVEHATTRVQFGKRLDSFGSIQEKLARMAMLHYVTESMAYMISGNMDSGSI 388

Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EAA ++  A  + ++ C        EA++ +GG GY++   + +  R+     I  
Sbjct: 389 DYHLEAAISKCFASESAWYVCD-------EAIQILGGMGYMKATGLEKVMRDLRIFRIFE 441

Query: 445 GSGNAMVLDV 454
           G+ + + L V
Sbjct: 442 GTNDILRLFV 451


>gi|327293948|ref|XP_003231670.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326466298|gb|EGD91751.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 441

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSS 237
           SRE        M    V   + +TE   G+D+A IT+  +K +DG  Y ++G K W  + 
Sbjct: 140 SRELQEKFLPDMLTAKVRSCIAITEPDAGSDVANITTTAEKSADGKYYIINGEKKWITNG 199

Query: 238 PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             SD   M  +    G  G  ++   L+ G P G+  +RL    G     T  +E  N  
Sbjct: 200 IWSDYTTMAVRTGGPGPTGLSMIVVPLK-GYP-GVTMRRLPVS-GQVCGGTTYIELDNV- 255

Query: 296 GFLLGDLNVSTGPVED--------MKILIY------LDSAIMSVSGMRVSLAEAIHYARR 341
                       PVE+        M+ ++       L  A+      RV+L+ A  Y  +
Sbjct: 256 ----------KVPVENLIGQEGHGMRYIMTNFNHERLTIAVGVTRQARVALSAAFEYCMK 305

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATA 371
           R   G  L+DQPV++  ++    ++ +  A
Sbjct: 306 REAFGKTLMDQPVVRHRLSKAGAELESMWA 335


>gi|118469793|ref|YP_885121.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118171080|gb|ABK71976.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 394

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 29/275 (10%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVG 254
           ++   LTE   GT  A + S   ++ D  Y ++G KW ++ S ++  FI+ A+     V 
Sbjct: 127 SVAFALTEPGHGTG-ADLGSSAVRMGDE-YEITGEKWLITNSDIATHFIVFAKTAPTEVS 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN-------ATVELEFSNTFGFLLGDLNVS-T 306
            FLVPR       +GL  + L   +G +         A V +  +   G   G+ N    
Sbjct: 185 AFLVPR-----DTDGLSIEPLPETMGCKGGEHGHIRLAGVRVPATALIG-AEGEGNQHLE 238

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +E  ++ I   S   S   + +S+A A    + R   G  +  +  ++R +A++A DI
Sbjct: 239 RALEISRVFIAASSLGTSERALELSVARA----KERVTFGKPIGSRQAIQRYLAEMATDI 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   L    A+ +D  K    EA+       + K +  +    V   A+   GG GY  
Sbjct: 295 YALRGLLADAAHKWDSGKRIPAEAS-------MCKLFGLEAVGRVTDRALLIHGGIGYTR 347

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              + R YR++  N +  G+     +   N L  G
Sbjct: 348 AYPVERLYRDARLNWLEEGTPTIQYMVAANELLSG 382


>gi|307105930|gb|EFN54177.1| hypothetical protein CHLNCDRAFT_24792 [Chlorella variabilis]
          Length = 403

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 108/244 (44%), Gaps = 20/244 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +A+ +  +++  G + L+G K W  ++  +D  ++ A+     +V  F+V
Sbjct: 137 LTEPSNGSDASALATVARRVQGG-WVLNGRKRWIGNATWADIAVIWARNSETSQVNAFIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +    G+P G    +++NKI  R     +++ ++ F     D         D   ++ +
Sbjct: 196 RK----GNP-GYSATKMENKIALRCVQNGDIKLTDAF-VPDADRIPGVSSFSDTNKVLAI 249

Query: 319 DSAIMSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              +++   + ++L        Y ++R   G  L    +M+  +  +     A   +++R
Sbjct: 250 SRIMVAWQPVGLALGAYDMCARYLQQRRQFGAPLASFQLMQEKLQRMLSTCQAMWLMAWR 309

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           L   ++  K   E+A+       + K W       V+A   E +GG+G + E  +A+ + 
Sbjct: 310 LTKLYEAGKLTHEQAS-------LVKAWTTLRGREVVALGRELLGGNGILSEFLVAKAFC 362

Query: 436 ESPA 439
           ++ A
Sbjct: 363 DAEA 366


>gi|86748873|ref|YP_485369.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86571901|gb|ABD06458.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 380

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 34/247 (13%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR------VGCF 256
           EK    D+  +++  +K  DG + L G K+  L+   +D  ++ A+  G       VG F
Sbjct: 127 EKNSRWDLGDVSTTAKKKGDG-WILDGEKFVVLNGEAADTLVVTARTAGGQRDRNGVGVF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           LVP         G+  +    + G R+    ++ F+   G  +G   V   P   + ++ 
Sbjct: 186 LVP-----ADAKGVSRKGYPTQDGQRA---ADITFT---GVEIGADAVIGDPANGLPLIE 234

Query: 316 IYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD--IALDIAA 368
             +D A       +V  M  SL   + Y + R   G  +    V++   AD  +A + A 
Sbjct: 235 QVVDDARSALCAEAVGAMDESLTTTVEYIKTRKQFGVPIGSFQVLQHRAADMFVAAEQAR 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A+   +A  FD+AK R+   A A++          K A  V  ++++  GG G   E 
Sbjct: 295 SMAMFATMAADFDDAKERANAIAAAKVQ-------IGKSAKFVGQQSIQLHGGIGMTMEA 347

Query: 429 SIARHYR 435
            I  +++
Sbjct: 348 KIGHYFK 354


>gi|320105221|ref|YP_004180812.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319752503|gb|ADV64263.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 653

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 35/299 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKIS--DG-IYCLSGHKWFLSSP-MSDAFIMLAQV------EG 251
           LTE   G+D   + +  + I   +G  Y L+G K ++++  ++D   ++A+       E 
Sbjct: 207 LTEPEAGSDAGNVQTTAEPIQTEEGPAYQLNGQKRYITNGGIADVLTVMARTPDPKGGES 266

Query: 252 RVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV- 309
           ++  FLV P L     P     +  K K G R  AT  L F+     ++   NV  GPV 
Sbjct: 267 KITAFLVTPDL-----PGFRVLEERKPKCGIRGTATGALAFNE---MIVPASNV-LGPVG 317

Query: 310 EDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           + +++ L  LD    +         +V L  A+ +A  R   G  L    ++K+ IA IA
Sbjct: 318 KGLRVALTVLDFGRTTFGACCTGVAKVCLKAAVRHASTRRQFGKTLGSFELVKKKIAFIA 377

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               A  A +   A   D        A    +   I K +  ++   ++ E ++  GG G
Sbjct: 378 AHTYAMEATTRHAAALIDSG------AEDYMLETGILKVFATEVLWDIVYETLQIHGGQG 431

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           Y  +    R  R++  N+I  G G   VL    +   G     + F  + +D  S   K
Sbjct: 432 YFNDEPYERMMRDARINTI--GEGANEVLKGYLIALAGMRDLGKEFEAVFRDFTSGSSK 488


>gi|194707498|gb|ACF87833.1| unknown [Zea mays]
          Length = 433

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 105/238 (44%), Gaps = 18/238 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +S  +D  I+LA+     ++  F+V 
Sbjct: 169 LTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNSTFADVLIILARNADTNQLNGFIVK 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    G+P GL   +++NKIG R     ++  +  F     D        +D+  ++ + 
Sbjct: 229 K----GAP-GLKATKIENKIGLRMVQNGDIILNKVF-VPEEDRLTGINSFQDINKVLAMS 282

Query: 320 SAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             +++    G+ + + +  H Y + R   G  L    + +  +  +  +I A   + +RL
Sbjct: 283 RIMVAWQPIGISMGVYDICHRYLKERKQFGAPLAAFQLNQEKLVRMLGNIQAMLLVGWRL 342

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              ++  K     ++       + K W  K A  V++   E +GG+G + +  +A+ +
Sbjct: 343 CKLYESGKMTPGRSS-------LGKAWTSKKAREVVSLGRELLGGNGILVDFLVAKAF 393


>gi|328554981|gb|AEB25473.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens TA208]
          Length = 594

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 50/290 (17%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K W  +S  +D F++ A+V+G +   F+V    E   P G+     + K+G + 
Sbjct: 175 YILNGEKQWITNSAFADVFVVYAKVDGDKFSAFIV----EKNYP-GVSTGPEEKKMGIKG 229

Query: 284 NAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332
           ++T        E+   N    LLG+  +  G V    IL      L    +  S   + L
Sbjct: 230 SSTRTLILDQAEVPKEN----LLGE--IGKGHVIAFNILNIGRYKLAVGTIGASKRVIEL 283

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           + A  YA +R      +    + +  +A ++  + A  +  +R    F++  SR  E A 
Sbjct: 284 SAA--YANQRRQFKTPISSFTLTQEKLATMSARLYAMESSVYRTVGLFEDNMSRLTEEAQ 341

Query: 393 A---RIMAPITKYWC-CKMAPAVIAEAMECI--------GGSGYIEERSIARHYRESPAN 440
                +   I +Y   C +     +E ++ I        GG G+++E  + R YR+S  N
Sbjct: 342 KDGREVAKSIAEYAIECSLNKMCGSETLDYIADEGVQIHGGYGFMQEYEVERAYRDSRIN 401

Query: 441 SILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGS 478
            I  G+     L V            L L EK   L E+L   + ++ GS
Sbjct: 402 RIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKALQEELMMLMPEEPGS 451


>gi|149061277|gb|EDM11700.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_a
           [Rattus norvegicus]
          Length = 333

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 15/126 (11%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           K+F +      KA      V   LG   L+E   G+D  A+ ++  K S   Y ++G K 
Sbjct: 148 KLFRKHGTEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFALKTRADK-SGNYYVINGSKM 206

Query: 233 WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           W  ++  ++ F++ A V+   G     CFLV R  E     G    R +NK+G R+++T 
Sbjct: 207 WISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTE-----GFQIGRRENKMGIRASSTC 261

Query: 288 ELEFSN 293
           +L F N
Sbjct: 262 QLTFEN 267


>gi|67043767|gb|AAY63982.1| putative acyl-CoA dehydrogenase [Lysiphlebus testaceipes]
          Length = 282

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+A + ++ +K  +  + ++G K W  +  +++ + +LA+     E      
Sbjct: 17  VTEPGAGSDVAGLKTKAEKKGNE-WIINGTKMWITNGGVANWYFLLARTNPDPEAPSNKA 75

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               +++  +P G+   R +  +G R++ T  + F +     + + N+  G     KI +
Sbjct: 76  FSAFIIDRDTP-GITPGRKELNMGQRASDTRMVTFEDV---RVPNENILIGEGAGFKIAM 131

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +     V+   V LA     EAI Y+  R   G ++ +   +   IAD+++ I  A 
Sbjct: 132 ETFNKTRPPVACGAVGLAHRAMDEAIKYSLERKAFGKVIAEHQAVAFMIADMSIGIETAR 191

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               + A + D  +        A  +A I K +   MA    ++A++  GG+G+  +  +
Sbjct: 192 LAWMKAAWAADNKEPN------ALALASIAKCYAADMANKCASDAVQIFGGAGFNSDYPV 245

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 246 EKLMRDAKIYQIYEGT 261


>gi|84516749|ref|ZP_01004107.1| isovaleryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509217|gb|EAQ05676.1| isovaleryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 382

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 26/258 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G+K W  + P +D  ++ A+ +   G   +
Sbjct: 123 LAMSEAGAGSDVVSMALRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
              L +    G       +K+G R + T EL F +    F  +LG      G    M  L
Sbjct: 182 TAFLIEKEMTGFSTSPHFDKLGMRGSNTAELIFDDVAVPFENVLG--AEGRGVAVLMSGL 239

Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            Y +  +++  G   M   L E + Y   R   G  + +  +M+  IAD+   + +A A 
Sbjct: 240 DY-ERVVLAGIGLGIMAACLDEIMPYLASRKQFGQPIGNFQLMQGKIADMYTAMNSARAY 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIEER 428
            + +A + D      ++AA            CC    + A     +A++ +GG+G++ + 
Sbjct: 299 VYAVAAACDRGTVTRQDAAA-----------CCLYASEEAMKQAHQAVQAMGGAGFLADA 347

Query: 429 SIARHYRESPANSILLGS 446
            +AR +R++    I  G+
Sbjct: 348 PVARLFRDAKLMEIGAGT 365


>gi|121605042|ref|YP_982371.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594011|gb|ABM37450.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 102/266 (38%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  DG Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTRIKTTAVK-KDGRYVINGQKVWISRVQHSDWMILLARTTPLAEVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L     +G+  + + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFMVD--LRQAEKSGMTVRPIPNMVNHETN---ELFFENLEIPEENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      +     Y   R V G  +     
Sbjct: 235 FKYILDGLNAE-------RTLI----AAECIGDGYWFIDRVTKYVGERVVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA+  ++I AA  + ++    FD  +    +A  A+ +A          A A    
Sbjct: 284 VQFPIAEAYIEIEAANLMRYQACELFDARQPCGAQANMAKYLA----------AKASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  CI   GG G+  E  + R +RE+
Sbjct: 334 ANACIQFHGGFGFANEYDVERKFRET 359


>gi|119718824|ref|YP_925789.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539485|gb|ABL84102.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+ YA+ R   G  +I+   +   +AD+A  I A+  L +R A    + K R E
Sbjct: 279 RAAYEVALDYAKTREQFGRAIIENQAIAFTLADMATSIEASRLLVWRAAWMARQGK-RFE 337

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A        ++K +  + A  V  +AM+ +GG+G+  E  + R  R++   +I  G+
Sbjct: 338 QAE-----GSMSKLFAGETAVRVTGQAMQILGGNGFTREYPVERMARDAKIYTIFEGT 390


>gi|328786944|ref|XP_393736.3| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Apis
           mellifera]
          Length = 431

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 45/255 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D ++I ++    S   +Y LSG K W  ++P++D  I+ A+         
Sbjct: 166 FGLTEPDHGSDPSSIETKAVYDSKKKVYKLSGIKIWITNAPIADIMIIWAKS-------- 217

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNR-----SNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
               +ED    G   +R +N+ GNR           L  S T   L+ DL V   P E+M
Sbjct: 218 ----VEDDEMRGFIVERKENE-GNRLITPAIKGKFSLRCSITGMILMDDLEV---PEENM 269

Query: 313 --------KILIYLDSAIMSVSGMRVSLAEA-IHYAR-----RRHVSGGILIDQPVMKRA 358
                      + L++A   ++   +  AEA +H +R     R+     +  +Q + K+ 
Sbjct: 270 LPNVKGLKGPFVCLNNARYGIAWGALGAAEACLHISRAYSLHRKQFKRPLAANQLIQKK- 328

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + ++  DI+       R+    DE K+  E       M  + K      A  +   A + 
Sbjct: 329 LVEMMCDISFGLQACLRVGRLKDENKATPE-------MISMIKKNSAMKALNIARNARDM 381

Query: 419 IGGSGYIEERSIARH 433
           +GG+G  +E  + RH
Sbjct: 382 LGGNGISDEYHVIRH 396


>gi|294084446|ref|YP_003551204.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664019|gb|ADE39120.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 396

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD  A+ +  ++  D  Y ++G K W   +  SD  ++LA+   R      
Sbjct: 131 FGVTEPTSGTDTLALQTTARREGDR-YIINGQKIWTSRAEHSDLMLLLARTTPRDAVTKR 189

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  FL+   L      G+  + ++  I   ++AT E+ F N               F
Sbjct: 190 TDGLSVFLLD--LNSLLDKGVTIRPIRTMI---NHATTEVFFDNVSIPADALIGDEGKGF 244

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   +   +  + +A  YA  R V G  +     +
Sbjct: 245 RYILSGMNAE-------RILI----AAECIGDAKWFIDKASAYASERSVFGQPIGKNQGV 293

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A     + AA A+ +R A  +D  +    +A  A+++A    +          AEA
Sbjct: 294 QFPLAKAYAHMIAAEAIVYRAAACYDAGEDPGADANMAKLLAADASWEA--------AEA 345

Query: 416 -MECIGGSGYIEERSIARHYRES 437
            M+  GG  + EE  I R +RE+
Sbjct: 346 CMQTHGGFAFAEEYDIERKFRET 368


>gi|257483788|ref|ZP_05637829.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|320325178|gb|EFW81246.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|330889973|gb|EGH22634.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. mori str. 301020]
 gi|331012700|gb|EGH92756.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      +    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|300785951|ref|YP_003766242.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795465|gb|ADJ45840.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 364

 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 11/192 (5%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           + +  V  G   TE   G++++A+T+  ++    I      +W     ++D F++LA   
Sbjct: 99  LARGDVLAGFAATEAGAGSELSAVTTSAERTGRQIRLRGRKRWVTFGQLADVFLVLATCA 158

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           GR    LV  L+E   P G+  + ++ ++G R+     + F +      G+L    G   
Sbjct: 159 GR----LVTVLVEADRP-GITAEPVRGQLGMRAAQLAHVGFDDVL-VPAGNLLAPPGFGL 212

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQPVMKRAIADIAL-D 365
                  LD    +V+   V LA+A   A   H    V GG+ +      RA+   +L D
Sbjct: 213 SHVTATALDHGRFTVAWGCVGLADACLRAAAEHAAGRVQGGVRLAGHQTVRALLGRSLAD 272

Query: 366 IAAATALSFRLA 377
            +AA  L  R A
Sbjct: 273 TSAARELCARAA 284


>gi|323525666|ref|YP_004227819.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323382668|gb|ADX54759.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 380

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 22/244 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G++E   G+++A + ++  +  D  + ++G K W  +   SD  I   + E  +   L+
Sbjct: 125 IGISEPDVGSNVAELKTRAVRDGDH-FIVNGEKTWITNGVYSDVLICTVRGEKGLSHILI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKI--GNRSNATVELEFSNTFGF-LLGDLNVSTGPVEDMKIL 315
            R+ E G  +     R  +KI  G++S A + +  +      L+G+     G    MK+ 
Sbjct: 184 DRV-EHGYES-----RNIDKIALGSQSTAQIFITDARVPAINLIGE--EGEGLRNTMKVF 235

Query: 316 IYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               + +  +SV  MR +L E+I YA +R   G ++    ++   IA++ + + AA  + 
Sbjct: 236 ENARAHVGTLSVGIMRTALEESIAYATQRKQFGKVIAAHQLIAAKIANMGIMVDAARLMC 295

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+    D A  R +      + A + K +  + A  V  +A++  GG+G   E ++ R 
Sbjct: 296 QRVFGLID-AGVRCD------LQASMAKAFATEAAVQVCRDAVQLHGGNGITREFNVERL 348

Query: 434 YRES 437
            RE+
Sbjct: 349 LREA 352


>gi|302540348|ref|ZP_07292690.1| butyryl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302457966|gb|EFL21059.1| butyryl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 18/130 (13%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I A+  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRQQFGRPIIDNQGVAFQLADMRTRIDASRLLVWRASWMAVN 332

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD A+              ++K +  + A  V A+A++ +GG+G+  E  + R +R+
Sbjct: 333 GKPFDSAEGS------------MSKLFASETAKTVTAQAVQILGGNGFTREYPVERMHRD 380

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 381 AAIYTIFEGT 390


>gi|226492968|ref|NP_001148492.1| glutaryl-CoA dehydrogenase [Zea mays]
 gi|195619782|gb|ACG31721.1| glutaryl-CoA dehydrogenase [Zea mays]
          Length = 433

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 105/238 (44%), Gaps = 18/238 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP 259
           LTE   G+D +++ +   K+  G +     +W  +S  +D  I+LA+     ++  F+V 
Sbjct: 169 LTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNSTFADVLIILARNADTNQLNGFIVK 228

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    G+P GL   +++NKIG R     ++  +  F     D        +D+  ++ + 
Sbjct: 229 K----GAP-GLKATKIENKIGLRMVQNGDIILNKVF-VPEEDRLTGINSFQDINKVLAMS 282

Query: 320 SAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             +++    G+ + + +  H Y + R   G  L    + +  +  +  +I A   + +RL
Sbjct: 283 RIMVAWQPIGISMGVYDICHRYLKERKQFGAPLAAFQLNQEKLVRMLGNIQAMLLVGWRL 342

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              ++  K     ++       + K W  K A  V++   E +GG+G + +  +A+ +
Sbjct: 343 CKLYESGKMTPGRSS-------LGKAWTSKKAREVVSLGRELLGGNGILVDFLVAKAF 393


>gi|326383581|ref|ZP_08205267.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197665|gb|EGD54853.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 401

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 42/265 (15%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IM 245
           AP+   +V     +TE     G D  A+++  +K+ DG + ++G K F++     AF I+
Sbjct: 121 APLATGAVRSAFAMTEPSPGAGADPNALSTTAEKV-DGGWKINGLKRFITGADGAAFFII 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---- 295
           +A+  G+ G       FL P      S +   +   K+ IG       E+ F++ F    
Sbjct: 180 MARTVGQRGDRGGATMFLAPAETAGISVDRHIHTTDKSMIGGH----CEVSFTDVFVPDE 235

Query: 296 --------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                   G+      V  GP     ++ ++ SA+ +    R+    A+ Y  +R   GG
Sbjct: 236 DVLGAPHEGYRYA--QVRLGPARMTHVMRWMGSAVRA---HRI----AVDYVEQREGFGG 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D  +M++ IAD  +D+AAA AL  R     D  +  S+  +       I K +  + 
Sbjct: 287 RLADLGMMQQMIADNEIDLAAARALLVRACYELDLGEHASDSTS-------IAKTFGAEA 339

Query: 408 APAVIAEAMECIGGSGYIEERSIAR 432
              V   AM+  GG G  E+  +AR
Sbjct: 340 FSRVADRAMQMCGGLGVSEDLPLAR 364


>gi|317507085|ref|ZP_07964847.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254628|gb|EFV13936.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 382

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVE---GR-- 252
           + +TE   G+D AAIT+    + DG  Y ++G K F ++   +   ++ A ++   GR  
Sbjct: 112 MAITEPGCGSDSAAITTTA--VLDGDEYVINGEKIFATAGARAKNVVVWASIDPAAGRAA 169

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTG 307
           +  F+VP     G+P G+   RL++K+G +++ T  + F N       LLG  ++NV  G
Sbjct: 170 IKSFVVPW----GTP-GMTLVRLEHKLGIKASDTAAILFDNVRVPKENLLGSPEVNVEKG 224

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPV--MKRAIAD- 361
               M+     D+    V+G  + +A+ A+   R      G+ I  D P    + A AD 
Sbjct: 225 FAGVMQT---FDNTRPVVAGQALGVAKAALEELRSILEKEGVEISYDIPAYNQQSAAADY 281

Query: 362 --IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  A   LS + A   D+  S S+EA+ A+  A        + A A+  +A+E  
Sbjct: 282 LALEADWEAGYLLSLKAAWMTDKKLSNSKEASIAKAKA-------GRAATAITLKAVELA 334

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G  GY ++  + +  R++    I  G+
Sbjct: 335 GLYGYSQKSLLEKWARDAKITDIYEGT 361


>gi|296159731|ref|ZP_06842553.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295889945|gb|EFG69741.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTKIKTTAERRGD-RYVINGQKVWISRVQHSDLMILLARTTPLADVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L +   +G+  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFIVD--LHEAIGHGMTVQPILNMVNHETN---ELFFDNLEIPAENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   YA+ R V G  +     
Sbjct: 235 FRYILDGLNAE-------RTLI----AAECIGDGYWFVDKVTEYAKERIVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + F  A  FD  +    +A  A+++A          A A    
Sbjct: 284 VQFPIARSFINVEAASLMRFEAARRFDAHQPCGAQANMAKLLA----------ADASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 334 ANACLQFHGGFGFACEYDVERKFRET 359


>gi|254773886|ref|ZP_05215402.1| FadE10 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 642

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    + DG  Y L+G K W  +  +++  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARLASTATPVDDGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPSENLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L++  +S+        + +L  A  ++  R   G  L +   + R ++ IA  + 
Sbjct: 282 IALTTLNAGRLSIPASATGSAKWALKIAREWSGERVQWGKPLAEHEAVARKLSFIAATVY 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+    A   DE ++        RI A + K W  +MA  +  E M+  GG GY   
Sbjct: 342 ALDAVLELSAQMADEGRND------IRIEAALAKLWSSEMACVIADEVMQIRGGRGYETA 395

Query: 428 RSIA 431
            S+A
Sbjct: 396 ESLA 399


>gi|55581734|emb|CAH55646.1| putative acyl-CoA dehydrogenase [Serratia marcescens]
          Length = 385

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 14/236 (5%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR- 260
           TE   G+DI A+ S  Q    G Y L+G+K F++ +P++D FI+ A+     G   V   
Sbjct: 128 TEPDAGSDIYAMKSTAQPCEGG-YRLNGNKIFITNAPIADIFIVYAKTHPEHGFMGVSAF 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           +LE G P GL    +  K    +    EL F++ F      +G          D  I   
Sbjct: 187 VLEKGMP-GLNVGAVSPKDCLSNCPWSELTFNDVFIPETQRIGMPGAGGAIFHDSMIWEK 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              + + +  M      A+ YA++R   G  +     +   I D+ L +     + +R  
Sbjct: 246 GCLSALFIGAMERVFDSALDYAKQRRQFGKAIGQFQSVSNRIIDMKLRLEQCRLMLYRAC 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              D  +    + A ++++  I++Y     A     +A++  GG+G  +E  + RH
Sbjct: 306 WKHDRGQDAEIDIAMSKLL--ISEY-----AVQSALDAIQIFGGAGMDQELGLVRH 354


>gi|296268700|ref|YP_003651332.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091487|gb|ADG87439.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 388

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 24/270 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +        L+E   G+D A++ ++  +  D  Y L+G K W  ++ +S  + ++A 
Sbjct: 116 PVARGEAMFSYALSEPEAGSDAASMKTRAVRDGDH-YVLNGTKMWITNAGVSQFYTVMAV 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + +    G+ +   + K+G + + T ++   N     +    +   P
Sbjct: 175 TDPSAGARGISAFVVEKDDPGVSFGPKEKKLGIKGSPTRQVILENV---RIPAWRMIGEP 231

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
               K  L  LD   ++++   + +A+     AI Y + R   G  + D   ++  +AD+
Sbjct: 232 GTGFKTALATLDHTRITIAAQAIGIAQGALDYAIGYVKERRQFGKRIADFQGVQFMLADM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA------VIAEAM 416
           A+ + AA  L++        A ++SE       +  +T +       A      +  +A+
Sbjct: 292 AMKLEAARQLTY-------AAAAKSELVMNGTPVDDLTFFSSAAKCAASDAAMEITTDAV 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  +  + R  R++    I  G+
Sbjct: 345 QLLGGYGYTRDYPVERMMRDAKITQIYEGT 374


>gi|169235342|ref|YP_001688542.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167726408|emb|CAP13191.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 386

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 27/259 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+       GL ++E   G+++A + +  ++  D  Y L+G K+++ + +   ++ +   
Sbjct: 118 PVANNDQLTGLAVSEPEVGSNLAGMQTTAERDGD-EYVLNGEKYWIGNGVEADWVTVYAK 176

Query: 250 EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            G           F VP        +G   + +  K+G R++    +   +        +
Sbjct: 177 TGDTDDRYMNYSLFAVPT-----DTDGYEAEHIPEKMGMRASKQAHIVLDDCRVPEANLI 231

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357
               G    M +  + +   + V+G  + LA     EA  +   R   G  + D   ++ 
Sbjct: 232 GTEGGGF--MMLTDFFNHGRVVVAGHGLGLAAAAFEEAWDFVHDRAGFGRTVSDFQSVQH 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           ++AD+ ++  +A AL++R A    E  +  +E     + A + K    ++A A   + M+
Sbjct: 290 SLADMRIEFESARALAYRAA----EKVAAHDEPG---LWAAMAKTKATEVATANAEQGMQ 342

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG     +R IAR YR+
Sbjct: 343 FHGGRSNFTDRRIARVYRD 361


>gi|134099782|ref|YP_001105443.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005627|ref|ZP_06563600.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912405|emb|CAM02518.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 385

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 132/293 (45%), Gaps = 40/293 (13%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    + W P              +   S+ +   +TE   G++
Sbjct: 87  VVSPAIC-GTVIARFGTDEQKRRWLPG-------------LADGSLTMAFAITEPDAGSN 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG-----CFLVPRLLE 263
              IT+  ++   G + LSG K F+S   ++DA +++ + E  R G      F+VP+   
Sbjct: 133 SHRITTTARR-DGGDWVLSGRKVFISGIDVADAVLVVGRTEDARTGKLKPALFVVPK--- 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD---- 319
                G   Q ++ ++ +  +    L F +    L GD  V +     +++   L+    
Sbjct: 189 --DAPGFEAQHIEMELVS-PDRQYSLFFDDVR--LPGDALVGSEDAGLLQLFAGLNPERV 243

Query: 320 -SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++ +++   R +L +A+ Y + R V G  +     +   +A + +++  A  ++ + A+
Sbjct: 244 MASALALGTARHALGKAVSYVKERSVWGTPIGSHQGLAHPLAQVKIELELARLMAQKAAH 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +D   S  +EAA     A + KY   ++A   + +A++ +GG+G   E  +A
Sbjct: 304 LYD---SGDDEAAGE--AANMAKYAAGEVAVRSVDQAVQSLGGNGLTTEYGVA 351


>gi|56476517|ref|YP_158106.1| cyclohexanecarboxyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312560|emb|CAI07205.1| Cyclohexanecarboxyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 124/315 (39%), Gaps = 45/315 (14%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
             +VA    P + K+W  ++ +            KT   I + LTE   G+D A +  + 
Sbjct: 94  GQIVAGHARPDIAKEWLGQVIAG----------HKT---IAIALTEPSAGSDAARLKLKA 140

Query: 219 QKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGL 270
             + DG  + L+G K  +S +  SD  ++ A+          +  FLVP  L   +    
Sbjct: 141 --VRDGNDFVLNGEKTSISMATQSDVAVVFARTGSEAERARGISAFLVPMDLPGITRTAF 198

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSV 325
                 + IG R      + F +   +   +LG  N   G ++ M+   Y  + I    +
Sbjct: 199 ------DDIGTRPVGRGSIFFDDVRVSADMMLG--NEGQGFIQVMQGFDYSRALIGLQCM 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +R SL E   Y + R   G  + D   +   +A+      A  AL  R     D+   
Sbjct: 251 GVVRASLDETWRYIQEREAFGKKIGDFQGVTFPLAEAETMYEACRALCLRTLWLKDQGLP 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EAA       + K+W  K+A  +I + +   G  GY  +    + YR+     + +G
Sbjct: 311 HTSEAA-------MCKWWAPKLACEIIHQCLLTHGHGGYASDYDFGQRYRD--VMGLQIG 361

Query: 446 SGNAMVLDVLNLLEK 460
            G A ++ ++   EK
Sbjct: 362 DGTANIMKMIIGREK 376


>gi|57639298|gb|AAW55569.1| ACADSB [Macaca fascicularis]
          Length = 255

 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           Q T+  +G   L+E   G+D  A+ ++  K  D  Y L+G K W  S+  +  F+++A V
Sbjct: 151 QLTTEKVGSFCLSEAGAGSDSFALNTRADKEGD-YYVLNGSKMWVSSAEYAGLFLVMANV 209

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +  +G   +   + D    GL   + +NK+G R+++T  L F N
Sbjct: 210 DPTIGYKGITTFIVDRDTPGLHIGKPENKLGLRASSTCPLTFEN 253


>gi|302527266|ref|ZP_07279608.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
 gi|302436161|gb|EFL07977.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
          Length = 395

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 22/281 (7%)

Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           A  IFS   D   +    P+ +   A    LTE   G+D+ A+ +      DG + +SG 
Sbjct: 109 AGAIFSTATDEQRERYLLPVVRGERACCFSLTETNAGSDVRAMRTVATPDGDG-WRISGR 167

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F S+ P++D  +++A++ G  G      L++  SP            G    + + L+
Sbjct: 168 KVFSSAGPIADFSVLVARMAGE-GESYSAFLVDLDSPGCTVADGEVPMSGQHIESDIILD 226

Query: 291 F-----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                     G +   L +  G V   ++L         +   R +L   I +AR R V 
Sbjct: 227 DCYVGPQQLLGRVGDGLRIGLGRVTTNRLL----HCPTVLGHARRALELTIEFARTRQVF 282

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG L     ++  IAD+A    A+ A+++   +  D   + S EA        + K +  
Sbjct: 283 GGPLAALQSIQHKIADMAASYYASRAMTYDALSELDSGSTPSTEAF-------MCKLFVA 335

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + A  +  EA++  G +G +    +   +R      +L GS
Sbjct: 336 ENAFRIADEAVQIHGKAGLVRGAEVEWLFRRLRMFRVLTGS 376


>gi|262194435|ref|YP_003265644.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262077782|gb|ACY13751.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 392

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 43/257 (16%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRV---GCFLV 258
           +E++ G+++    +  +  ++  + LSG K+F  ++  ++  I+ A++ G     G FLV
Sbjct: 124 SEEKAGSELIRTEALARGSAEEGFKLSGDKYFSTNADTAELLIVYARIAGPTPAYGAFLV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED------M 312
           PR     S +G+   R     G R++ T ELE  +              P E       +
Sbjct: 184 PR-----SADGIRIVRRWEMNGLRASGTYELELRDC-------------PAESQLAGNGL 225

Query: 313 KIL-IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366
           +IL + L+S+   ++   V +A  +      YAR + +    L +  V    +  +  ++
Sbjct: 226 RILEVGLNSSRTLMAACAVGIARRVRDVCLGYARNKEIKNTKLFNNHVFGAKLGQMEAEL 285

Query: 367 AAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
               A+    A   DE  SR +       E     ++  + K  C ++   + +   E +
Sbjct: 286 DGMMAVCRTAAREMDEIASREDAAKVFFREGTLKSVI--VAKMLCGQLGWKIASVGSESL 343

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY  +  I +  R+
Sbjct: 344 GGLGYTHDSIIGKLLRD 360


>gi|325000682|ref|ZP_08121794.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 428

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 71/294 (24%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     +TE   G D   +T++  +  D  Y + GHKWF S+  +  F+++  V
Sbjct: 119 PLLRGELRSCFSMTEPGAGADPTMLTTRAVRDGDE-YVIDGHKWFSSNATASDFLIVMVV 177

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-DLNVSTGP 308
                            P+   YQR          A++ +  ++T G  +  D+ V   P
Sbjct: 178 T---------------DPDAPPYQR----------ASMIVVPTDTPGVDVARDIPVMDHP 212

Query: 309 VEDMKILIYLDSAIMSVSGMRVS-------------LAEA------IHYARR-------- 341
             ++   +Y   A +   G+RV              LA+       IH+A R        
Sbjct: 213 --EVGGELYGGHAEVFYRGVRVPAENLVGNEGDGFRLAQQRLGPGRIHHAMRWLGQSQRA 270

Query: 342 ----------RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                     R  SG  L D+ +++  IA  A ++ AA  L+ + A + D        A+
Sbjct: 271 FDMLCERAVSRTASGSRLADKQMVQDMIATSAAEMQAARLLTLQAAWTMDRVG-----AS 325

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            AR+   + KYW  ++   VI  A++  G  G+  +  + + YR + A  I  G
Sbjct: 326 NARVEIGMIKYWGARVLHDVIDRAIQVHGSLGFSGDLPLEQMYRAARAARIYDG 379


>gi|324997836|ref|ZP_08118948.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/255 (19%), Positives = 108/255 (42%), Gaps = 15/255 (5%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           +   L+E+  G+D A++ ++ ++  D  + L+G K W  ++  S  + ++A  +      
Sbjct: 125 VSYALSEREAGSDAASMKTRARRDGDD-WILNGTKCWISNAGESTWYTVMAVTDPEKKAN 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   +      G      + K+G   + T E+ F +    + GD  +          L 
Sbjct: 184 GISAFVIHADDPGFVVGSKERKLGIHGSPTREIHFEDCR--IPGDRIIGAEGTGFKTALR 241

Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            LD    ++    V +A+     A  Y + R   G  L +   ++  +AD+A+ + AA  
Sbjct: 242 TLDHTRPTIGSQAVGIAQGALDVATRYLKERRQFGQALAEFQGLQFMLADMAMKVEAARQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +  A+    A+    +  +   ++   K +    A +V  +A++ +GG+GY  +  + 
Sbjct: 302 LCYVAAS---RAERNEPDLGF---VSSAAKCFASDTAMSVTTDAVQLLGGAGYTRDFPVE 355

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 356 RMMRDAKITQIYEGT 370


>gi|17548873|ref|NP_522213.1| acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17431123|emb|CAD17803.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 377

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 35/273 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244
           P   T  AIG   LTE   G++   + ++     DG + L+G K F++    + ++  F 
Sbjct: 112 PDLATGRAIGAFCLTEPHAGSEANNLRTRAVP-RDGHWVLNGSKQFVTNGARAQLAIVFA 170

Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           +     G+ G   F+VP         G    R ++K+G R++ T  +   +       LL
Sbjct: 171 VTDPDAGKRGISAFIVPT-----QTPGFHVGRPEHKLGIRASDTCPITLEDCAVPAANLL 225

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQP 353
           G+      P E +KI L  L+   + ++   V +A A   A       R   G  L +  
Sbjct: 226 GE------PGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A  + AA  L    A      K    EA+ A       K +  ++A  + +
Sbjct: 280 TIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYASELAEEICS 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +A++  GG GY+ + ++ RHYR++    I  G+
Sbjct: 333 KAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365


>gi|313225127|emb|CBY20920.1| unnamed protein product [Oikopleura dioica]
          Length = 571

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 63/306 (20%), Positives = 128/306 (41%), Gaps = 43/306 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+ +  TP   +++ P++ S E             +     LTE   G+D +A+ +   +
Sbjct: 286 MIDVNGTPEQREEYCPRLTSGE-------------IIGSYCLTEPGSGSDASALATTCVR 332

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQ 273
             D  Y L+G K F+S + + D + ++ + +        + C L+P+     +P GL + 
Sbjct: 333 DGDD-YVLNGSKCFISGAGVHDLYAVMVRTDPATKGPKGISCVLIPK----DTP-GLSFG 386

Query: 274 RLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             + K+G +S+ T         +  SN  G      N++   +   ++ I    A  S+ 
Sbjct: 387 ADETKMGWKSHPTKVLIMENCRVPVSNLLGVEGKGFNIAMSGLNGGRVNI----ASCSLG 442

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           G + ++  A  +   R   G  L  Q  ++  +A++A  +  +  +    A + D+    
Sbjct: 443 GAQKAMLAAKEHLGVRKAFGKTLDSQQYLQYKMAELATQLVTSRLMVRHAAAAIDQ---- 498

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++ A A + A + K         V    ++  GG GY+++    +  R+   +SIL G+
Sbjct: 499 -KDPAAASLCA-MAKLHATDNCSEVANGCLQMFGGYGYLKDYPCEQIVRDLRVHSILEGA 556

Query: 447 GNAMVL 452
              M L
Sbjct: 557 NEVMRL 562


>gi|118617922|ref|YP_906254.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium ulcerans Agy99]
 gi|118570032|gb|ABL04783.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium ulcerans Agy99]
          Length = 465

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 27/220 (12%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++G+   F+V     + S  GL   +    +G R+ 
Sbjct: 251 YRLDGVKSLVPAAADAELFIVAAQLDGKPALFIV-----ESSAAGLIV-KADPSMGIRAA 304

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E S     L   LG+   +     +   L  L  A ++V      L   I Y + 
Sbjct: 305 ALGQIELSKVSVPLRARLGEDQATDADYSEAIALARLGWAALAVGTSHAVLDYVIPYVKE 364

Query: 342 RHVSGGILIDQPVMKRAI-----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           R   G     +P+ +R       A+IA+++     +++R A+  ++  S + EAA A   
Sbjct: 365 RKAFG-----EPIARRQAVAFMCANIAIELDGLRLITWRGASRAEQGLSFAREAALA--- 416

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               K         +  + ++ +GG GY +E  + R YR+
Sbjct: 417 ----KRLGSDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 452


>gi|91777551|ref|YP_552759.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690211|gb|ABE33409.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTKIKTTAERRGD-RYVINGQKVWISRVQHSDLMILLARTTPLAEVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L +   +G+  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFIVD--LHEAIGHGMTVQPILNMVNHETN---ELFFDNLEIPAENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   YA+ R V G  +     
Sbjct: 235 FRYILDGLNAE-------RTLI----AAECIGDGYWFVDKVTEYAKERIVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + F  A  FD  +    +A  A+++A          A A    
Sbjct: 284 VQFPIARSFINVEAASLMRFEAARRFDAHQPCGAQANMAKLLA----------ADASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 334 ANACLQFHGGFGFACEYDVERKFRET 359


>gi|218780166|ref|YP_002431484.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761550|gb|ACL04016.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 364

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 17/241 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLV 258
           + + E   G D  ++ +  +K  +G Y L+G K F   +  ++  ++ A ++G    F+V
Sbjct: 126 MAMCEPHFGADAVSLKTTAEK-KNGSYVLNGVKCFAPCASQAEKMLVSASLDGENNLFVV 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E G+  GL     +  +G  S  T  +   N        +    G V+  ++L   
Sbjct: 185 ----EKGAA-GLSVSEKEKNLGLYSLETNTVTLENCEVPADARIGGDKG-VDYDRVLARS 238

Query: 319 DSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             A+ S++ GM R SL     YA  R   G  +  +  +   IA++A +  A   ++++ 
Sbjct: 239 RVAMASMAAGMCRCSLDIVKQYAVEREQFGEPIAHRQSIAFMIAEMAYETDAIRLMAWQA 298

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  +  KS   EA  A++ A        +MA  +    ++ +GG GYI E ++ R YR 
Sbjct: 299 ASRLEAGKSAKREAYLAKLYAG-------EMAMKICDYGVQILGGHGYIREMNVERLYRN 351

Query: 437 S 437
           +
Sbjct: 352 A 352


>gi|326780773|ref|ZP_08240038.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326661106|gb|EGE45952.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 333 GKP------FTSAEGSMSKLYASETARDVTAQAIQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|289627527|ref|ZP_06460481.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649923|ref|ZP_06481266.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868352|gb|EGH03061.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      +    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGQPCLTEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|182440104|ref|YP_001827823.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468620|dbj|BAG23140.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 333 GKP------FTSAEGSMSKLYASETARDVTAQAIQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|218779467|ref|YP_002430785.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760851|gb|ACL03317.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 374

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 24/246 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-------QVEGRVG 254
           LTE   G+DI  + +   +  D  + ++G K F +      +I+LA        +   + 
Sbjct: 113 LTEPEAGSDIQNLKTSAIRQGDQWF-INGRKLFATGAADADYILLAVRSNPDLAINRGMS 171

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311
            FLVPR        GL    + NKI +    + E+   N       L+G  +   G +  
Sbjct: 172 LFLVPR-----ETPGLTISPM-NKIASNGFPSCEILLDNAPVKNDALVGGQDAGWGVIAF 225

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              +  L  A   V      +     YA++R +SG  L +   +   ++D+A+ I AA  
Sbjct: 226 TGAMERLLVAAGCVGLCSRVVHYVYEYAQQRMISGKPLYEIQWVNHCLSDLAVRIQAADL 285

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +         +A  +    A   I     K +  ++   VI  AM+ +GG  Y+++  + 
Sbjct: 286 M-------VKDAVEKVSSGANPAIEICGAKAFASELQQGVIMSAMKIMGGRAYLKDHPVE 338

Query: 432 RHYRES 437
           R  RE 
Sbjct: 339 RWMREG 344


>gi|327349245|gb|EGE78102.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 442

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 66/314 (21%), Positives = 130/314 (41%), Gaps = 46/314 (14%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L     +  +V +   VA   T    +   P++ + +Y              +  G+T
Sbjct: 125 AGLAGAQSIHANVYATQPVAKFATEEQKQRMLPRLIAGDYR-------------VCFGVT 171

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGR 252
           E   G +   + ++  +  D  Y +SG K W  S+ ++   ++LA+           EG 
Sbjct: 172 EPNTGLETLKLRTEAIRDGDS-YSVSGQKIWISSAQVAKRMVLLARTTPLEEVKKPSEG- 229

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           +  F +     D   +GL  +R+K K+G R+    E+ F N       L+G+        
Sbjct: 230 LSLFFIDF---DKDASGLGLRRIK-KMGGRAVDANEVFFDNYRIPADSLIGEEG------ 279

Query: 310 EDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  KI+++    +  +++   +    ++L +A  YA+ R V G  +     +   +AD  
Sbjct: 280 DGFKIVLHGMNAERCLLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQGIAHPLADAY 339

Query: 364 LDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +++ AA   ++  A  +D +K+ +S       +   + KY   + A      A+   GG 
Sbjct: 340 MNLEAAKLATYHAARLYDASKTDKSITQKAVGVACNLAKYLAAEAAFTACERAVLAHGGM 399

Query: 423 GYIEERSIARHYRE 436
           GY +E  + R+ RE
Sbjct: 400 GYAQEYHVERYLRE 413


>gi|330752485|emb|CBL87434.1| acyl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
          Length = 599

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 30/267 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +    G  Y L+G K W  +   +D  I+ A+++    +  F+
Sbjct: 153 LTEPGSGSDANSGKTSAKLNETGTHYVLNGQKMWITNGGFADVMIVFAKIDDDENLSAFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           + +  E     G+     + K+G + ++T +L F N     + +L  + G  E  KI + 
Sbjct: 213 LEKGFE-----GITMNPEEKKMGIKGSSTRQL-FFNDVEVPVENLLYNRG--EGFKIAVN 264

Query: 317 YLDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + + G+ +     ++ E++ YA  R   G  +     ++  + ++A+   A   
Sbjct: 265 ILNIGRIKLGGVVIGSCKDAINESVKYANTREQFGRPISKYGAIRHKLGEMAIQTYALET 324

Query: 372 LSFRLANSFDEAKSR-------SEEAAYARIMA-----PITKYWCCKMAPAVIAEAMECI 419
             +R   + D+A +          EA    I A      + K    ++   V+ EA++  
Sbjct: 325 AVYRATQNIDDAIADLAAGGMDKGEATLKGIAAFAPECAMMKILGSEVTDYVVDEAVQVH 384

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY  E      YR++  N I  G+
Sbjct: 385 GGMGYSAETRAEHAYRDARINRIFEGT 411


>gi|297670072|ref|XP_002813203.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like isoform 1 [Pongo abelii]
          Length = 621

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  ++  F + A+ E         
Sbjct: 180 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLASIFTVFAKTEVVDSDGSMK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGDG 292

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 406 YTRDYPYERILRDT 419


>gi|229488802|ref|ZP_04382668.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324306|gb|EEN90061.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 403

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 42/269 (15%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
           AP+    +     +TE     G+D +A+ ++ +K+  G + ++G KWF++ +  +  FI+
Sbjct: 121 APLASGDMRSAFAMTEPAPGAGSDPSALNTRAEKVPGG-WKINGKKWFITGADGAGFFII 179

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRL-----KNKIGNRSNATVELEFSNT 294
           +A+  G  G       FL P         GL   R      K  IG     T E  F   
Sbjct: 180 MARTSGEPGQRGGATMFLAPT-----DTPGLVVGRHIDTLDKAMIGGHCEVTFEDLFVPD 234

Query: 295 FGFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
              +LG+++       V  GP     ++ +L +A       R     A+     R   G 
Sbjct: 235 EA-VLGEVDQGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVARVAEREGFGS 286

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D  ++++ +AD  +DIAA+ AL  +     D       +  +A     I K +  + 
Sbjct: 287 KLGDLGMIQKMVADNEIDIAASRALLVQACFELD-------QGGHASNATSIAKTYAAEA 339

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRE 436
              ++  +++  GG G   +  +AR  RE
Sbjct: 340 IFRIVDRSIQMCGGMGVSGDLPLARLSRE 368


>gi|116669948|ref|YP_830881.1| butyryl-CoA dehydrogenase [Arthrobacter sp. FB24]
 gi|116610057|gb|ABK02781.1| butyryl-CoA dehydrogenase [Arthrobacter sp. FB24]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------------ 246
           G GLTE   G+D A  T    ++  G + ++G+K F+++  +D   ++            
Sbjct: 123 GFGLTEPEAGSD-AGGTKTTARLEGGEWIINGNKEFITNSGTDITRLVTVTAVTAKHERQ 181

Query: 247 -AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
              V+  +   LVP      +  G   ++  NK+G  ++ T  L   +       LLG+ 
Sbjct: 182 DGTVKKEISTILVPT-----NTPGFKAEKAYNKVGWNASDTHPLTLKDVHVPEANLLGEQ 236

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
                       L  LD   ++++ +    A+     ++ YA+ R   G     Q + K 
Sbjct: 237 GRGYA-----NFLSILDEGRIAIAALATGAAQGCVDLSVKYAKERSAFG-----QNIGKY 286

Query: 358 AIADIALDIA--AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
               IA  IA   A A + RLA  + +A +R       +  A I K    + A     +A
Sbjct: 287 QA--IAFKIARMEARAHTARLA--YYDAAARMLAGKPFKTQAAIAKMVAGEAAMDNARDA 342

Query: 416 MECIGGSGYIEERSIARHYRES 437
            +  GG G+I E ++ARHYR+S
Sbjct: 343 TQVFGGYGFINEFTVARHYRDS 364


>gi|294784841|ref|ZP_06750129.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|294486555|gb|EFG33917.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 378

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 30/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP 259
           LTE   G+D +A   +   + DG  Y L+G K F+++    +F  +  + +   G   + 
Sbjct: 123 LTEPGAGSDASA--GRTTAVKDGNEYVLNGRKCFITNGAVASFYCITAITDKEKGLKGIS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKI 314
               +    GL     ++K+G R+        SNT   +L D  +    +     E   I
Sbjct: 181 MFFVEKGTKGLSTGNHEDKMGIRT--------SNTCDVVLEDCRIPASALVGKEGEGFAI 232

Query: 315 -LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD A   +  + V +A     EAI Y + R   G  +I    ++  IAD+ +    
Sbjct: 233 AMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKNQALQFKIADMEIKTET 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  +        D      +E+A       I K +   +A  V +EA++  GG GY  E 
Sbjct: 293 ARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVSSEAIQMFGGYGYSREY 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            + +  R+S    I  G+     + + N
Sbjct: 346 PVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|17551932|ref|NP_498885.1| Acyl CoA DeHydrogenase family member (acdh-6) [Caenorhabditis
           elegans]
 gi|20141460|sp|P34275|IVD_CAEEL RecName: Full=Probable acyl coa dehydrogenase 6; AltName:
           Full=Probable isovaleryl-CoA dehydrogenase; Short=IVD
 gi|15145275|gb|AAA27913.2| Acyl coa dehydrogenase protein 6, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 18/182 (9%)

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS----GMR 329
           +K+G RS+ TV+L F +      +++G+     G     ++  + D  +++V+     ++
Sbjct: 223 DKLGMRSSDTVQLFFEDVRVPSSYIIGE----EGRGFAYQMNQFNDERLVTVAVGLLPLQ 278

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             + E I YAR R + G  L+DQ  ++  +A++  ++ A  +L +R       A+ + E+
Sbjct: 279 KCINETIEYARERLIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTV----LARCQGED 334

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            +    MA   K    ++A  V  + ++  GG+GY+ +  I+R +R+    SI  G    
Sbjct: 335 VSMLTAMA---KLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFRIFSIGAGCDEV 391

Query: 450 MV 451
           M+
Sbjct: 392 MM 393


>gi|239939649|ref|ZP_04691586.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986133|ref|ZP_04706797.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443075|ref|ZP_06582465.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346022|gb|EFE72926.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 273 MAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 333 GKP------FTSAEGSMSKLYASETARDVTAQAIQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|225851565|ref|YP_002731798.1| isovaleryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|265999703|ref|ZP_05467458.2| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225639930|gb|ACN99843.1| isovaleryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263095410|gb|EEZ19011.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 392

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 132/315 (41%), Gaps = 51/315 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225
           +P     + PK+ S E+              +G L ++E   G+D+  +    +K  D  
Sbjct: 113 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVFMKLAAEKRGD-R 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G+K W  + P +D  ++ A+ +   G   +   + +    G    +  +K+G R +
Sbjct: 158 YVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGS 217

Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL F        N  G     +NV    ++  ++++    A   +  M   L   + 
Sbjct: 218 NTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 273

Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y   R        DQP+     M+  +AD+ +   A+ A  + +A + D  ++  ++AA 
Sbjct: 274 YVHERKQ-----FDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACDRGETTRKDAAG 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +       +  + A  +  +A++ +GG+GYI +    R  R++    I  G+G + + 
Sbjct: 329 CIL-------YSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 379

Query: 453 DVLNLLEKGTNLFEQ 467
            +L     G  LF++
Sbjct: 380 RML----IGRELFQE 390


>gi|300789719|ref|YP_003770010.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799233|gb|ADJ49608.1| putative acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 431

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 34/301 (11%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +++PS  S ++V+     +   D+ P  F  E+ P           A  L L E++   D
Sbjct: 157 VLAPSAVSTALVS-WGDEQQQADYLPA-FVGEHVP-----------AAALALQEQKALYD 203

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPN 268
                ++ ++   G Y L G K  +  +  ++ F++ A +EGR    FLV       S N
Sbjct: 204 PFKPATKARRTPKG-YQLDGVKSLVPRATQAELFVVSADLEGRGPALFLVE------SSN 256

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
                  +  +G R  AT +L  SN     G LLG          ++  L  L  A ++ 
Sbjct: 257 AGVSIEAEPAMGLRGAATGKLHLSNVALPAGALLGSGKADV--FAEVVRLSRLGWAALAA 314

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L   + Y   R   G  +  +  +  ++ADIA+++     ++ R A   ++ K 
Sbjct: 315 GTAKAVLDYVVPYVNERTAFGEPISHRQAVAFSVADIAIELEGLRLVTLRAAARAEQGKP 374

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E A AR +A + K      A       ++ +GG G+++E  + R YR+  A  ++ G
Sbjct: 375 YAREVALARKLA-VDKGMQIGNA------GVQLLGGHGFVKEHPVERWYRDLRAIGVMEG 427

Query: 446 S 446
           +
Sbjct: 428 A 428


>gi|290475698|ref|YP_003468587.1| acyl-CoA dehydrogenase [Xenorhabdus bovienii SS-2004]
 gi|289175020|emb|CBJ81823.1| Acyl-CoA dehydrogenase [Xenorhabdus bovienii SS-2004]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 47/344 (13%)

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHL-----------MSPSVTSASMVALMTTP----RVH 171
           VV+K AH      L  +A+ E G L           M+    S S+  L+       +  
Sbjct: 42  VVQKLAHN---GWLGGLAKPENGGLGFDVTTFGLLNMAIGAGSGSLTGLLNVHAMVLKTI 98

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-LSG 230
           +DW     S++      AP+ K  +      TE   G D   +++Q  +  DG Y   +G
Sbjct: 99  EDWG----SQDQKQRFLAPLVKGEIIGAFAQTEVSAGGDSKNLSTQFAE--DGNYLRANG 152

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K W   + ++D F++  + +G     LVP+     +P GL     KN +G +S     L
Sbjct: 153 QKSWITFAQIADLFLVFGKYQGLDTAVLVPK----DTP-GLKVTAKKNMLGFKSAYLAVL 207

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE-----AIHYARRR 342
           +F +     +   N+   P     ++    LD   +SV+   + + +     +   A  R
Sbjct: 208 DFKDC---RVPKTNIVGKPGFGQNLISNNALDYGRISVAWAALGIQQAALAASARRANSR 264

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
                +L DQ +++  +A+++  + A+  +      S  +AK   +E A  +I+    K 
Sbjct: 265 ITFDTLLADQGIIRGYLAEMSSSLLASQLICL----SATKAKETRDEDALEQILQ--AKL 318

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +    A    A+A++  GG G  E   I+R YR++    ++ GS
Sbjct: 319 FSSHEAGIAAAKAVQIHGGHGCDESNGISRLYRDAKILQVVEGS 362


>gi|15488707|gb|AAH13498.1| Acyl-Coenzyme A dehydrogenase, medium chain [Mus musculus]
          Length = 421

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC--F 256
           +TE   G+D+AAI ++ +K  D  Y ++G K W  +   ++ + +LA+   + +V     
Sbjct: 160 VTEPSAGSDVAAIKTKAEKKGDE-YVINGQKMWITNGGKANWYFLLARSNPDPKVPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   + +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIHIGKKELNMGQRCSDTRGIAFEDV---RVPKENVLIGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 275 GAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K     +A  +  +A++  GG G+  E  +
Sbjct: 335 LSYQRAAWEVDSGRRNT-------YYASIAKACAGDIANQLATDAVQIFGGYGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|15827314|ref|NP_301577.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221229792|ref|YP_002503208.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|1168288|sp|P46703|ACDP_MYCLE RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|466860|gb|AAA85936.1| acd [Mycobacterium leprae]
 gi|13092863|emb|CAC30246.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219932899|emb|CAR70831.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 389

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E+  G+D A++ ++ +   D  + L+G K W  +   S  + ++A  +   G   +  
Sbjct: 134 LSEREAGSDAASMRTRAKADGDD-WILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            +      G      + K+G + + T EL F      + GD  +          L  LD 
Sbjct: 193 FIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCR--IPGDRIIGEPGTGFKTALATLDH 250

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + + 
Sbjct: 251 TRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIVYA 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +           ++  +K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 311 AAARAERGEPD------LGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMR 364

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 365 DAKITQIYEGT 375


>gi|294868768|ref|XP_002765685.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239865764|gb|EEQ98402.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 433

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           P  +    I L +TE   G+D+A+I +  +   DG  Y ++G K W  +   SD F +  
Sbjct: 149 PCVRGEKNICLCITEPHAGSDVASIRTTAKLTPDGKHYIVNGQKKWITNGIFSDYFSVAV 208

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  G     +   L+E G P GL   R+  + G  S+ T  +E        L D+ V   
Sbjct: 209 RTGGPGMKGISMLLVERGMP-GLRTTRMDCQ-GVLSSGTTFVE--------LDDVKV--- 255

Query: 308 PVEDM--------KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           PVE++        K+++Y          I ++   R+    +  YA++R   G  L++ P
Sbjct: 256 PVENLIGKDNDGFKVIMYNFNHERWGLIIQALRFSRILYELSFKYAQKRKTFGKTLMEHP 315

Query: 354 VMKRAIADIALDIAAAT 370
           V++  +A+++  I   +
Sbjct: 316 VIRWKLAEMSRQIEGTS 332


>gi|293607477|ref|ZP_06689814.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814122|gb|EFF73266.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 37/284 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           I +G+TE   G+ +  + +   + SDG + ++G K F ++    A ++L  V    G   
Sbjct: 121 ISVGMTEPDAGSAVTELKTSATR-SDGGWRINGTKIF-TTHGPHASVILTYVRFGPGTGG 178

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRS-----NATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  +L D   +G+       K+G RS        VE+ F N F   + D  V  G     
Sbjct: 179 IGSVLIDTKADGV-------KLGKRSAFMSGEEWVEIFFDNVF---VADDMVVLGEGGFK 228

Query: 313 KILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           K +   +     +   S++  R +  EA ++A +R   G +L +   ++   AD+ + + 
Sbjct: 229 KQIAGFNVERIGNTARSLALGRYAYEEARNWAMQRKQFGRLLCEFQGLQWKFADMRIKLD 288

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R A   D     + + A       I K +C ++   V  +A++ +GG GY  E
Sbjct: 289 AAQLLLYRAAIGADTGFPSATDTA-------IAKAYCNQVGFDVANDALQVLGGLGYSRE 341

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFS 470
             +    R      I  GS     +++L N + +G  +FE+ FS
Sbjct: 342 SLVEYCVRRCRGWMIAGGS-----IEILKNRIAEG--IFERSFS 378


>gi|226363991|ref|YP_002781773.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242480|dbj|BAH52828.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 109/278 (39%), Gaps = 44/278 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            G+TE   G D   IT+  ++  D  Y ++G K ++S  M    I+L     R   F   
Sbjct: 124 FGVTEPGAGLDTTKITTFARREGDK-YIVNGRKVWISKAMESEKILLLT---RTTKFEDA 179

Query: 260 RLLEDGSPNGLC-YQRLK------NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED- 311
           +   DG    L    R K       K+G  +  + EL       F+ G L +   PVED 
Sbjct: 180 KKKTDGLTLFLTDLDRSKVDIRPIKKMGRNAVTSNEL-------FIDG-LEI---PVEDR 228

Query: 312 --------MKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                     IL  L+   M V+       R +L   + YA  R V G  +     ++  
Sbjct: 229 VGEEGKGFKYILDGLNPERMLVASEALGIGRAALRRGVQYANEREVFGRPIGMNQGLQFP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD    + AA  +  +    +D  K  + EA  A       KY C          A++ 
Sbjct: 289 LADSLARLDAAELVLRKATWLYDNGKPCAREANMA-------KYLCADAGFQAADRALQT 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY EE  +AR++RE+    I   S   MVL+ L 
Sbjct: 342 HGGMGYSEEYHVARYFREARLTKIAPLS-QEMVLNYLG 378


>gi|268576737|ref|XP_002643348.1| Hypothetical protein CBG15945 [Caenorhabditis briggsae]
 gi|187026809|emb|CAP34382.1| hypothetical protein CBG_15945 [Caenorhabditis briggsae AF16]
          Length = 413

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256
           +TE   G+D+A + ++ +K  D  Y L+G K W  ++  ++ F +LA+ +       G  
Sbjct: 148 VTEPGAGSDVAGVKTKCEKKGDE-YILNGSKMWITNAGHANWFFVLARSDPNPKTPAGKA 206

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  SP GL   R +  +G R + T  + F +     +   NV   P E  K+ +
Sbjct: 207 FTAFVVEGDSP-GLTRGRKEINMGQRCSDTRGITFEDV---RVPAANVVGAPGEGFKVAM 262

Query: 317 -YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+ +        L  A  Y+  R   G  + +   +   +A++A++   A 
Sbjct: 263 KTFDKTRPTVAALATGVTYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINAELAR 322

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++++     D  +  S  A+ A++ A            +    A++  GG+G+  E   
Sbjct: 323 LMTYKSGAEVDAGRPGSYYASIAKLFA-------SDAVNSAATNAVQVFGGAGFNTEYPA 375

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 376 EKLMRDAKIFQIYEGT 391


>gi|297670074|ref|XP_002813204.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like isoform 2 [Pongo abelii]
          Length = 498

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  ++  F + A+ E         
Sbjct: 57  LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLASIFTVFAKTEVVDSDGSMK 116

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 117 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKVPVENILGE--VGDG 169

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 170 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 229

Query: 366 IAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++EA++ +GG G
Sbjct: 230 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEALQILGGLG 282

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 283 YTRDYPYERILRDT 296


>gi|196234604|ref|ZP_03133424.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
 gi|196221350|gb|EDY15900.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
          Length = 588

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 118/294 (40%), Gaps = 30/294 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV------EG 251
             LTE   G+D A + ++ +  +DG  Y L+G K +++ + ++    ++A+       E 
Sbjct: 169 FALTEPEAGSDAANVQTRAEPSADGTHYVLNGEKRYITNAAIAQVLTVMARTPIPGGNET 228

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304
            V  FLV     D     L   R++ K+G R  AT  L F        N  G L   L V
Sbjct: 229 AVTAFLV---TPDMPGFALIEPRME-KLGIRGTATGRLAFRNMRVPRENILGPLGKGLKV 284

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +   ++  +          S    +  L  A H+A RR   G  L    +++  IA +A 
Sbjct: 285 ALSVLDFGRTTF----GACSTGAAKTCLRLATHHANRRRQFGRTLGAFELVRGKIARMAA 340

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +  A  A++   A+  D             +   + K +  +    ++ +  +  GGS Y
Sbjct: 341 NAYAMEAMTTVTASLIDRGLEDY------MLETAMLKVFTTEALWQIVNDTFQIYGGSAY 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-FEQLFSTLEQDLG 477
             +  + R  R++  N I  G+   +   +  +  +G  + F++++  L    G
Sbjct: 395 FTDLPLERMLRDARINQIGEGANEVLTSFIALVGMRGPGMQFKEIWDALHHPAG 448


>gi|33591828|ref|NP_879472.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571471|emb|CAE44960.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381245|gb|AEE66092.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 382

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 23/258 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           AP        G GL+E  GG+++ A+ ++ +++  G + L G K +++ +P +D  ++ A
Sbjct: 114 APALAGRKVAGFGLSEPDGGSNVRAMKTRAERVEGG-WRLHGSKLYITNAPFADFLLVAA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +    +    +   + +    G    +LK K G R++ T  +   N F     LLG+   
Sbjct: 173 RTSAALKPESISLFIVELPNAGFDIAKLK-KEGIRASETALIHIDNAFVPDDCLLGETE- 230

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359
            T P+    IL  L    + V+   + +A A   A       R V+G  + +   +   +
Sbjct: 231 GTYPL----ILESLSENRVGVAANALGMARAAFDAAASFANDRLVAGKRVGEYQAIAHKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD++  I A   L +  A   D+    +  AA  +++A  T       A AV  +A+   
Sbjct: 287 ADMSAQIEATRWLVYYGAWRVDQGTLDAATAARVKLVASET-------AVAVSEQAIRIF 339

Query: 420 GGSGYIEERSIARHYRES 437
           GG+G + E  + R +R++
Sbjct: 340 GGAGIMREYPVGRIHRDA 357


>gi|83855022|ref|ZP_00948552.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83842865|gb|EAP82032.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 561

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 45/303 (14%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +A ++    T    + W P+I S E  PT          A+    TE   G
Sbjct: 257 GSLGTRSEIAAELIIAGGTDAQKEKWLPRIASAETLPT----------AV---FTEPNTG 303

Query: 209 TDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260
           +D+ ++ ++   + DG  Y ++G+K W   +  +    +LA+ + +      +  FL  +
Sbjct: 304 SDLGSLRTRA--VKDGNDYKITGNKTWITHAARTHVMTLLARTDPQTSNYKGLSMFLAEK 361

Query: 261 LL-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKI 314
               D +P    G+    ++  +G R     EL F    GF +   N+  G       ++
Sbjct: 362 TPGNDANPFPSEGMTGGEIE-VLGYRGMKEYELGFD---GFHVKGENLLGGEEGKGFKQL 417

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +SA +  +   + +A+     ++ YA  R   G  LI+ P +   +A +A++I  A
Sbjct: 418 METFESARIQTAARAIGVAQSALDISMQYAIDRKQFGKSLINFPRVSSKLAMMAVEIMIA 477

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E  
Sbjct: 478 RQLTYFSAFEKDEGRRCDVEAGMAKLLG-------ARVAWAAADNGLQIHGGNGFALEYK 530

Query: 430 IAR 432
           I+R
Sbjct: 531 ISR 533


>gi|119383466|ref|YP_914522.1| butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
 gi|119373233|gb|ABL68826.1| Butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 384

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 54/295 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220
           + L  T    ++W PK  + E              A+G   LTE   G+D A + ++ ++
Sbjct: 100 ILLGGTEAQKQEWLPKAAAGE--------------ALGAFALTEPTAGSDPADMKTRARR 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRL---LEDGSPNGLC 271
            +DG + L G K F+S+     FI++  V         +  F++P+    LE G+P    
Sbjct: 146 -TDGGWHLKGAKCFISNGGVADFIVVYAVTDPDKAHRGISAFILPKGTPGLEPGAPE--- 201

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            + +  K G+    T+ L+       LLG+     G    M++L   D+  + V+   + 
Sbjct: 202 -KTMGLKGGHVF--TLNLDCHLPEDALLGE--EGRGFRTAMQVL---DNGRIEVAAQCLG 253

Query: 332 LAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LAEA     I YAR R + G  L D+  ++  IAD+         ++FR A    +  +R
Sbjct: 254 LAEAAMKSAIAYARDRVIGGERLTDRQGIRWMIADM--------GVAFRQALLLSQDAAR 305

Query: 387 SEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +AA+       + + + K    + A  +   A++  GG GY  +  I R  R+
Sbjct: 306 QRQAAHHGGGRFSLASSMAKLAASEAAGRIADTALQLHGGYGYTRDFPIERIARD 360


>gi|307328363|ref|ZP_07607539.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885936|gb|EFN16946.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  + +R   S+  
Sbjct: 273 MAVGTARAAYEVALDYAKTRQQFGRPIIDNQGVAFQLADMRTRIDAARLMVWRA--SWMA 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +  E+A       ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 331 VTGKPFESAEGS----MSKLFASETAKQVTAQAVQILGGNGFTREYPVERMHRDAAIYTI 386

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 387 FEGTSEIQRLVIARTL 402


>gi|71734853|ref|YP_273957.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555406|gb|AAZ34617.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WIINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      +    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|116672364|ref|YP_833297.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
           FB24]
 gi|116612473|gb|ABK05197.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
          Length = 408

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 32/279 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P    +W PK+                S+     LTE   G+DIA   S   +     +
Sbjct: 129 SPEQQAEWMPKVVD-------------FSLKGVFSLTEPDSGSDIAGGLSTTARREGDSW 175

Query: 227 CLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR- 282
            L+G K W   +  +D   + A  Q +G+V  FLV R  E     G+  +++  K   R 
Sbjct: 176 VLNGAKRWIGGAVSADVLAVFARDQEDGQVKAFLVDRQAE-----GVTLEKIHGKTALRM 230

Query: 283 -SNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             NA + L+         L ++N S   V  M   +  D A ++      +   A+ Y  
Sbjct: 231 MQNAHIRLDGVRVPESMRLHNVN-SFKDVAAMLRAMRSDVAWIATGIQAGAFEAALRYVT 289

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    +++  +A +  ++ ++ +L  RL         R +++A A++   + 
Sbjct: 290 ERTQFGRQLGSFQLVQEKLARMLGNVTSSLSLVVRLTEQQARGIYRDQDSALAKMQTSL- 348

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                 +    +A A E +GG+G   E  +AR + ++ A
Sbjct: 349 ------LMRETVALAREVVGGNGITLETDVARFHADAEA 381


>gi|320094445|ref|ZP_08026224.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319978619|gb|EFW10183.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 377

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)

Query: 222 SDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            DG   L+GHK F++S +   + +++A+    +  +       D S  G+  + L  K+G
Sbjct: 142 KDGKVYLNGHKTFITSSLYAPYLVVMARDSENMDTY--TEWFVDMSLPGITKEPL-GKLG 198

Query: 281 NRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            R ++        VELE  + FG    + N     V D  +  +L  A+ +      +  
Sbjct: 199 LRMDSCCDVYFDNVELEEKDLFG---KEGNGFRRGVADFDLERFL-VALTNYGTAYCAFE 254

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEA 390
           +A  YA +R + GG         +AIA   L       +  RL N  +   E   + +  
Sbjct: 255 DAAKYANQR-IQGG---------QAIARHQLTQLKFAEMKVRLTNMRNMLYEIAWKHDNG 304

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +R    + KY+C + +  V+  A++ + G G   +  I R YR+   + I  G+   M
Sbjct: 305 LLSRGDCSMAKYYCSEASFGVVDRALQVLAGVGITGDHRIQRFYRDLRVDRISGGTDEMM 364

Query: 451 VL 452
           +L
Sbjct: 365 IL 366


>gi|300789720|ref|YP_003770011.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799234|gb|ADJ49609.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 401

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 45/285 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AA+++  +   D  Y L+G K F++S   +DA ++ A ++   G   +
Sbjct: 133 MAITEPAFGSDSAAVSTTARLDGDH-YVLNGEKIFVTSGERADAVVVWATLDKSKGRAAI 191

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
              ++E G+P G    R ++K+G R++ T  L F N     +   N+   P  D K    
Sbjct: 192 KSFVVEKGTP-GFEVVRTEHKLGIRASDTAVLRFENC---RVPKENLLGTPEIDTKKGFA 247

Query: 314 -ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIAD-----IAL 364
            ++   D+    V+ M + +A  A+   +R   S G+ I  D+P   +  A      +  
Sbjct: 248 GVMQTFDNTRPLVAAMAIGVARAALEETKRILTSAGVTIDYDRPANAQHAAAAEFLRLEA 307

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D  +A  L+   A   D  +  S +A+ A+           K   +V+  A++C+  +G 
Sbjct: 308 DYESAYLLTLESAWMADNRQPNSLQASMAK----------AKAGRSVVEIALKCVELTGA 357

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
             E S+   +           + +A +LD+     +GT   +QL 
Sbjct: 358 YSEESLLEKW-----------ARDAKILDIF----EGTQQIQQLI 387


>gi|215428151|ref|ZP_03426070.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis T92]
          Length = 221

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 32/225 (14%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----- 294
           SD  I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++      
Sbjct: 5   SDLVIVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAE 64

Query: 295 ---------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                    F +L+ +L     P E + I      AIM+ +GM   L + + YA+ R   
Sbjct: 65  NLLGQEGMGFIYLMQNL-----PQERISI------AIMAAAGMESVLEQTLQYAKERKAF 113

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +      +  +A++A +      +           K  +E+AA A       K++  
Sbjct: 114 GRSIGSFQNSRFLLAELATEATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYAT 166

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +    +    ++  GG GY+ E  +AR Y +S   +I  G+   M
Sbjct: 167 EKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRVQTIYGGTTEIM 211


>gi|254474145|ref|ZP_05087537.1| acyl-CoA dehydrogenase  6 [Pseudovibrio sp. JE062]
 gi|211956841|gb|EEA92049.1| acyl-CoA dehydrogenase 6 [Pseudovibrio sp. JE062]
          Length = 395

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 115/276 (41%), Gaps = 30/276 (10%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           AP     +   +G++E   G+D+A I +  +K  D  Y ++G K W  +S  +D   MLA
Sbjct: 112 APAIAGDMVACVGVSEAHAGSDVANIKTTARKDGDD-YVITGSKMWITNSTQADYMCMLA 170

Query: 248 QVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
                         +VP         G+      NK+G RS+ T ++ F +       L+
Sbjct: 171 NTSDGHKHQNKSLIIVPM-----DSAGITKSDRLNKLGQRSSDTAQIFFDDVRVPQRNLI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----YARRRHVSGGILIDQPVM 355
           GD     G     +++ + +  +     +  S+   I     Y R R      ++D  V+
Sbjct: 226 GD----EGAGFMYQMMQFQEERLWCALSLIDSMDRIIQLTEDYCRERAAFNQSILDFQVV 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              ++++  ++    ALS +   S    ++ +  A+ A++ A        +++  +    
Sbjct: 282 HFRLSELRTEVELLRALSEKCVESMVRGENVTRLASMAKLKAG-------RLSRELADSC 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           ++  GG GY+ +  +++  R+S   SI  G+   M+
Sbjct: 335 LQFWGGMGYMWDSPVSQFLRDSRLTSIGGGADEVML 370


>gi|313222482|emb|CBY39392.1| unnamed protein product [Oikopleura dioica]
 gi|313225130|emb|CBY20923.1| unnamed protein product [Oikopleura dioica]
          Length = 403

 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 62/306 (20%), Positives = 126/306 (41%), Gaps = 43/306 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+ +  TP   +++ P++ S E             +     LTE   G+D +A+ +   +
Sbjct: 118 MIDVNGTPEQREEYCPRLTSGE-------------IIGSYCLTEPGSGSDASALATTCVR 164

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQ 273
             D  Y L+G K F+S + + D + ++ + +        + C L+P+        GL + 
Sbjct: 165 DGDD-YVLNGSKCFISGAGVHDLYAVMVRTDPATKGPKGISCVLIPK-----DTPGLSFG 218

Query: 274 RLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             + K+G +S+ T         +  SN  G      N++   +   ++ I    A  S+ 
Sbjct: 219 ADETKMGWKSHPTKVLIMENCRVPVSNLLGVEGKGFNIAMSGLNGGRVNI----ASCSLG 274

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           G + ++  A  +   R   G  L  Q  ++  +A++A  +  +  +    A + D+    
Sbjct: 275 GAQKAMLAAKEHLGVRKAFGKTLDSQQYLQYKMAELATQLVTSRLMVRHAAAAIDQ---- 330

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++ A A + A + K         V    ++  GG GY+++    +  R+   +SIL G+
Sbjct: 331 -KDPAAASLCA-MAKLHATDNCSEVANGCLQMFGGYGYLKDYPCEQIVRDLRVHSILEGA 388

Query: 447 GNAMVL 452
              M L
Sbjct: 389 NEVMRL 394


>gi|298486286|ref|ZP_07004349.1| Butyryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159293|gb|EFI00351.1| Butyryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 383

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 41/272 (15%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RA 358
             L+++   +E  +I I    A  ++   R +   A+ YAR R     +  D+P+++ ++
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARER-----VQFDKPIIEHQS 281

Query: 359 IADIALD----IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           IA++  D    I A+  L    A      +    EA+ A++ A     W C       ++
Sbjct: 282 IANLQADMHTRINASRLLILHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SK 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG GY+E+  + R+YR++    I  GS
Sbjct: 335 AIQIHGGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|311743917|ref|ZP_07717723.1| glutaryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313047|gb|EFQ82958.1| glutaryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 424

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 21/261 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           +  E   T   P   T  A+G  GLTE   G+D   + ++ ++  DG  + L G K W  
Sbjct: 147 WGSEEQRTTWLPRMATGEALGCFGLTEPDFGSDPGGMRTRARR--DGSDWVLDGSKMWIT 204

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +  ++D  ++ A+ +  +  F+VP         G     +  K+  R++ T EL      
Sbjct: 205 NGSVADVAVVWARTDEGIRGFVVPT-----DTPGFSAPEITRKLSLRASVTSELVLEGVR 259

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +L +    +GP+  +    +      ++   R  L  A+ YAR R +    L   
Sbjct: 260 LPADAMLPEAAGLSGPLSCLNEARF-GIVFGAMGAARDCLRTALDYARDRQIFDQSLASF 318

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + +  +AD+ L++     L+  L    D  + R E+ +  ++          + A  + 
Sbjct: 319 QITQTKLADMTLELGKGMLLALHLGRLKDAGELRPEQVSLGKLNN-------VREAIGIA 371

Query: 413 AEAMECIGGSGYIEERSIARH 433
            E    +G +G   E  + RH
Sbjct: 372 RECRTILGANGISLEYPVLRH 392


>gi|226308729|ref|YP_002768689.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187846|dbj|BAH35950.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 393

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 42/269 (15%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
           AP+    +     +TE     G+D +A+ ++ +K+  G + ++G KWF++ +  +  FI+
Sbjct: 111 APLASGDMRSAFAMTEPAPGAGSDPSALNTRAEKVPGG-WKINGKKWFITGADGAGFFII 169

Query: 246 LAQVEGRVG------CFLVPRLLEDGSPNGLCYQRL-----KNKIGNRSNATVELEFSNT 294
           +A+  G  G       FL P         GL   R      K  IG     T E  F   
Sbjct: 170 MARTSGEPGQRGGATMFLTPT-----DTAGLIVGRHIDTLDKAMIGGHCEVTFEDLFVPD 224

Query: 295 FGFLLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
              +LG+++       V  GP     ++ +L +A       R     A+     R   G 
Sbjct: 225 EA-VLGEVDQGFAYAQVRLGPARMTHVMRWLGAA-------RRGHDVAVARVAEREGFGS 276

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L D  ++++ +AD  +DIAA+ AL  +     D       +  +A     I K +  + 
Sbjct: 277 KLGDLGMIQKMVADNEIDIAASRALLVQACFELD-------QGGHASNATSIAKTYAAEA 329

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRE 436
              ++  +++  GG G   +  +AR  RE
Sbjct: 330 IFRIVDRSIQMCGGMGVSGDLPLARLSRE 358


>gi|27375231|ref|NP_766760.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27348367|dbj|BAC45385.1| blr0120 [Bradyrhizobium japonicum USDA 110]
          Length = 211

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 15/188 (7%)

Query: 272 YQRLKN--KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMS 324
           Y+R +N  KIG  ++ T EL F N       LLG      G V+ M+ L    L  A+ +
Sbjct: 26  YERGRNLDKIGLHASDTSELFFDNVTVPPENLLGK-EEGQGFVQLMQQLPQERLALAVGA 84

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V+ M  ++     Y + R   G  L+D         + A  +A     +       D   
Sbjct: 85  VASMERAVKLTTEYTKERKAFGKPLMD-------FQNTAFTLAERKTEAMIARVFVDWCI 137

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R        + A + KYWC         E ++  GG GY++E  I+R + +S    I  
Sbjct: 138 ERLVAGDLDTVTASMAKYWCSDKQVQTADECLQLFGGYGYMQEYPISRIFIDSRIQKIYG 197

Query: 445 GSGNAMVL 452
           G+   M L
Sbjct: 198 GTNEIMKL 205


>gi|262203024|ref|YP_003274232.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086371|gb|ACY22339.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 379

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 125/282 (44%), Gaps = 49/282 (17%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
           ++ + ++E   G+D+A +T + +K+ DG + ++G K W  ++  + + +++A+ + R G 
Sbjct: 120 SLSVSMSEPEAGSDVANLTCRAEKV-DGGWIINGQKTWCSNAHFAKSILLIARTD-RTGA 177

Query: 256 -------FLVPRLLEDGSPNGLCYQRLKNKIGNRS------------NATVELEFSNTFG 296
                  F +P         GL  + + + +G R             ++ V  +  N + 
Sbjct: 178 KHEGLTQFHIP-----ADTPGLEIKGI-DTVGGREVNDLYFTNVRVPDSAVVGQVGNGWN 231

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+  LN         ++++    A M +     S A+ + +   R   G  +     ++
Sbjct: 232 QLMAGLNTE-------RLIL----AAMQLGVAERSFADTLAFVTERKQFGRPVGTFQALR 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAE 414
             +AD A +I     L +R+A   DE  ++    EA+ A++ A        +++ A+  +
Sbjct: 281 HRLADHATEIECTKLLVYRVAQLADENPTKLFPREASMAKLKA-------TEVSKAMTID 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           AM+ +GG GY  E    R  R +  +++  G+ N +  D++ 
Sbjct: 334 AMQMMGGYGYATEFDAERQMRGAIISTVYGGT-NEIQRDIIG 374


>gi|226289910|gb|EEH45394.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 435

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY P     + +  +   LG+TE   G+D+A I +  ++ S   Y ++G K ++++ +  
Sbjct: 142 EYMPK----VSRGEIRFCLGITEPDAGSDVANIKTTAKR-SGNKYIVNGAKKWITNGLWA 196

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTF 295
            +   A   G  G   +  L+   +  G+  +R++N   N S +T      VE+   N  
Sbjct: 197 DYCTAAVRTGGPGRKGISLLIVPLAAKGVTRRRMENSGVNASGSTFIEFDDVEVPVENLI 256

Query: 296 G-------FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           G       +++ + N              L  A   +   RV   +A +YA  R   G  
Sbjct: 257 GTENHGFTYIMSNFNPER-----------LSMAAACIRLSRVCAEDAYNYAITRETFGQP 305

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           LI   +++   +     I    A   +L  +   A     +      M  + K    +  
Sbjct: 306 LIANQIIRAKFSKFGELIEPCQAYLEQLTYTLHVAAKTGRQDVDVGGMTALLKVMTTRCL 365

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLLEKGTNL 464
             V  EA + +GG+GY +    AR  + S      ++G G+  +L  L + ++  NL
Sbjct: 366 EKVCREAQQVMGGAGYNKSGKGARIEQISRDVRVFVVGGGSQEILSDLAVRQEMKNL 422


>gi|297195784|ref|ZP_06913182.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722201|gb|EDY66109.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 409

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+V   R +   A+ YA  R   G  +ID   +   +AD+   I AA  L +R +     
Sbjct: 274 MAVGTARAAYEVALDYATTREQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRASWMATT 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K       +      ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I
Sbjct: 334 GKP------FTSAEGSMSKLFASETAKQVTAQAIQILGGNGFTREYPVERMHRDAAIYTI 387

Query: 443 LLGS 446
             G+
Sbjct: 388 FEGT 391


>gi|115402243|ref|XP_001217198.1| hypothetical protein ATEG_08612 [Aspergillus terreus NIH2624]
 gi|114189044|gb|EAU30744.1| hypothetical protein ATEG_08612 [Aspergillus terreus NIH2624]
          Length = 432

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 66/326 (20%), Positives = 116/326 (35%), Gaps = 43/326 (13%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +H +    L L   L+  H +  +     M+    T    +   PK    E+  T     
Sbjct: 94  SHPVYGGGLGLANDLQNEHSVVGNFPDVLMIHHFGTEEQKRTLIPKRLRGEFRAT----- 148

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GLTE   G+D   +++  +++ DG       KW   +      I+ A+   
Sbjct: 149 --------FGLTEPDHGSDATFMSTVAKRVGDGFEITGRKKWQTGAHHCTHMIIFARTSN 200

Query: 252 RVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLG 300
           + G       FLVPR  E        ++   N   +  +ATVEL+      S   G +  
Sbjct: 201 KSGSAKGITAFLVPR--ETPGIRVSSFEWTFNMPTD--HATVELDKVWVPASAVLGQVDF 256

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVMKRA 358
            L ++   V + +I      A  S    +  L  +I  AR R +   G  L D   ++  
Sbjct: 257 GLAIAQTFVHENRI----RQAASSCGAAKYCLDRSIERARSRKIWGEGRSLADHQAIQFP 312

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVI 412
           + ++   +     L  + +   D   + S    + RI   ++       +W  ++     
Sbjct: 313 VVELMTQVEMLRLLILKTSWDMDRIVASSTTTPWIRIEKELSDKVAMCNFWANRLCCEAA 372

Query: 413 AEAMECIGGSGYIEE---RSIARHYR 435
             A++  GG GY        I RH+R
Sbjct: 373 DRAIQIHGGDGYSRHYPFEHIYRHFR 398


>gi|91094295|ref|XP_971662.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum]
 gi|270014404|gb|EFA10852.1| hypothetical protein TcasGA2_TC001629 [Tribolium castaneum]
          Length = 418

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 39/267 (14%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPM 239
           EY P     + K  +    GLTE   G+D +++ ++ +   S   Y L+G K W  ++P+
Sbjct: 145 EYLP----KLAKGEIIGCFGLTEPNHGSDPSSMETRAKFNSSSKTYTLNGSKTWITNAPL 200

Query: 240 SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEF 291
           +D  I+  + + G++  FL+ R        GL   +++ K   R++ T       VE+  
Sbjct: 201 ADVLIIWGKNDDGKIRGFLIDR---KKHGKGLDTPKIQGKFSLRASTTGMILMDGVEIPE 257

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYAR----RRHVSG 346
           SN    +L ++    GP         L++A   ++   +  AE+ +H AR     R   G
Sbjct: 258 SN----ILPNVEGLKGPFS------CLNNARYGIAWGALGAAESCLHIARNYTLERKQFG 307

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +M++  AD+  DI+       ++    D+     E       M  + K     
Sbjct: 308 RPLAANQLMQKKFADMITDISLGLQGCLQVGRLMDKKLHTPE-------MISLLKRNNAG 360

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            A  +   A + +GG+G  +E  I RH
Sbjct: 361 KALVIARVARDMLGGNGIHDEYHIIRH 387


>gi|302541545|ref|ZP_07293887.1| acyl-[acyl-carrier-protein] dehydrogenase MbtN [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459163|gb|EFL22256.1| acyl-[acyl-carrier-protein] dehydrogenase MbtN [Streptomyces
           himastatinicus ATCC 53653]
          Length = 415

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 33/253 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ-------VEG 251
           LG +E  GG+D+  + +  +K   G + ++G K +LS   + D  ++L +       V+G
Sbjct: 146 LGASEPTGGSDLNGVRTVARKTPGG-WRVTGEKKYLSLGLVCDVALLLCRLDEGSGPVDG 204

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV------ELEFSNTFGFLLGDLNVS 305
           R+G   VPR       +GL  ++  +K G  +  T       E+      G   G L  +
Sbjct: 205 RLGLLAVPR-------DGLTPRKRLDKAGTSALDTTWMVIDAEVPDEALVGRRGGGLLGA 257

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           T  +   ++ I    A  +V G   ++  A  + +RR   G  LI+Q  ++  +A+++  
Sbjct: 258 TWGLNHERLSI----AAQAVGGAARAIGLATAHLQRRKQFGKPLIEQQALRLRLAELSSR 313

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +     ++ R A  +  A+  +   A         K    +    V++E M   GG GY+
Sbjct: 314 L-----IALRYA-VYSAAQGVAVPGACGTREIAALKTTAARFVEEVMSECMHLFGGPGYL 367

Query: 426 E-ERSIARHYRES 437
           E E  +AR +R+S
Sbjct: 368 EDETPLARMWRDS 380


>gi|313885733|ref|ZP_07819482.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619098|gb|EFR30538.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 401

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 72/310 (23%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-----ITSQGQKI 221
           +P   + W PK             +Q   +    GLTE   G+DIA       T QG K 
Sbjct: 123 SPEQVERWVPK-------------LQNFELQTCFGLTEPEHGSDIAGGLATTATRQGDK- 168

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               + ++G K W   +  +D   + A+   + ++ CF+    LE G   GL   +++NK
Sbjct: 169 ----WIINGEKRWIGGAGSADVLPIFARDTEDNKIKCFI----LEKGQ-KGLTIDKIENK 219

Query: 279 IGNR--SNATV---ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS---AIMSVSGMRV 330
           I  R   N  +   ++E ++          V+    +D+  ++Y+     A ++      
Sbjct: 220 IALRMVQNGHITMKDVEVADDHRL------VNINGFKDVARVLYVTRSGVANLAAGNSAG 273

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN-----SFDEAKS 385
           +   A+ Y + R      L++  +++  +A +  ++ +  AL  ++A       FDE +S
Sbjct: 274 AFRAALKYTKERKQFTKSLVEFQLVQEKLARMQANVISELALITQIAKLQTSGEFDEVRS 333

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA------ 439
                        I K +    +   +A A E  GG+G   +  +AR ++++ A      
Sbjct: 334 ------------SIAKMFNSLRSRETVALAREVCGGNGITYDYDVARFFQDAEAIYTYEG 381

Query: 440 ----NSILLG 445
               NS+++G
Sbjct: 382 THEVNSLVIG 391


>gi|257057280|ref|YP_003135112.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587152|gb|ACU98285.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 389

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 43/253 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV-------EGRV 253
           +TE   G+D  AI +  +K  DG  + ++G K F++      F M+  V       +G V
Sbjct: 128 ITEPGAGSDAKAIRTTARK--DGSDWVINGEKTFITGGNEADFAMVFAVTDPEKGADGGV 185

Query: 254 GCFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            CFLV R           + +  P  L +  ++      S    EL      GF L    
Sbjct: 186 TCFLVDRDMGWRSEYIDTMGEWGPASLIFDNVRVP---ESQILGEL----GQGFALAMQW 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  G         Y+  A    S  R+ L+ AI +A  R   G  L ++  ++  IAD  
Sbjct: 239 IGRGR--------YILPARALGSCERL-LSMAIEHANTRETFGAPLAERQAIQWMIADSG 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I A   L    A   D+          +R    I K +  + A  ++   ++  GG G
Sbjct: 290 VEIEALRWLVLHAAWQVDQGMD-------SRHAQSIAKLYGGQKANEIVDRVLQIHGGMG 342

Query: 424 YIEERSIARHYRE 436
           Y  E  I R YRE
Sbjct: 343 YTRELPIERWYRE 355


>gi|28870861|ref|NP_793480.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968854|ref|ZP_03396995.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301384100|ref|ZP_07232518.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302059174|ref|ZP_07250715.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302135012|ref|ZP_07261002.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28854110|gb|AAO57175.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926457|gb|EEB60011.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|331019250|gb|EGH99306.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 383

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++ +   D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
            +G      FLVP      +P G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 ELGKKGLSAFLVP----TDNP-GFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      +    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|257455634|ref|ZP_05620863.1| long-chain specific acyl-coa dehydrogenase [Enhydrobacter
           aerosaccus SK60]
 gi|257446917|gb|EEV21931.1| long-chain specific acyl-coa dehydrogenase [Enhydrobacter
           aerosaccus SK60]
          Length = 382

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 27/274 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           P   T   +G + +TE   G+D+ AI +   K  D  Y L+G K F+++      I++A 
Sbjct: 115 PKMATGELVGAIAMTEPGTGSDLQAIKTYAVKDGDD-YILNGSKTFITNGQLANLIIVAC 173

Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              + +G  G  L+  +LE     G    R   KIG  S  T EL F+N     +   N+
Sbjct: 174 KTDREKGAQGVSLL--VLETDGLAGFERGRNLEKIGLSSQDTSELFFNNV---RVPQKNL 228

Query: 305 STGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             G VE M  +  +          A+ +   ++ S+   I Y + RH       ++PV  
Sbjct: 229 -LGSVEGMGFIQLMQELPQERLIIALAAAGAIKKSIELTIEYTKERHA-----FNKPVW- 281

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +  +    +A   A    +    D A             A + K +       V  E +
Sbjct: 282 -SFQNTRFKLAECNADYLAVRAMCDAALEAHLNKKLTVQHAALLKAFTTDKQAKVTDECL 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 341 QLFGGYGYMLEYPIARLYADARVQKIYGGTNEIM 374


>gi|242075034|ref|XP_002447453.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
 gi|241938636|gb|EES11781.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
          Length = 418

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 50/250 (20%), Positives = 107/250 (42%), Gaps = 24/250 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ- 248
           + K        LTE   G+D +++ +  +K+  G + L+G K W  +S  +D  ++LA+ 
Sbjct: 147 LSKQQKVCAYALTEPDYGSDASSLNTVARKVPGG-WVLNGRKRWPGNSSFADVLVVLARN 205

Query: 249 -VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
               +V  F+V     +G  +GL   +++NK+  R     +++  + F   + D +   G
Sbjct: 206 TSTNQVNGFIV-----NGGSSGLKINKIENKVSMRMVQNCDIQLDDVF---VPDDDRLPG 257

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADI 362
                 ++  L  + +  + + + +AE ++ A  R++      G  L    + +  +  +
Sbjct: 258 ANSFQDLVDSLSFSRVMAAWVSIGIAEGVYDACHRYLGERKQFGVPLATFQLNQEKLVRM 317

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I A   L +RL          +  A+       + K W  K A   +A   E +GG+
Sbjct: 318 LGNIQAMWLLGWRLCKLHASGNITTGHAS-------LGKAWITKQARETVALGRELLGGN 370

Query: 423 GYIEERSIAR 432
           G + +  + +
Sbjct: 371 GIVTDFHVGK 380


>gi|120611541|ref|YP_971219.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590005|gb|ABM33445.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 652

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 154/398 (38%), Gaps = 100/398 (25%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSS---PMSDAFI--MLAQ 248
           L+E + G+ ++ I ++     D          Y L+G+K ++SS    M++  +  +LA+
Sbjct: 180 LSEPQAGSSLSDIATRAVPDGDDFESDPLGPRYRLAGNKMWISSGDHEMTENIVHLVLAK 239

Query: 249 VEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF- 291
           + G  G           F+VP+ L D      G  N +    L +K+G R      L F 
Sbjct: 240 IPGPDGRPVPGVKGISLFIVPKHLVDRSGQLTGERNDVALAGLNHKLGWRGTTNTLLNFG 299

Query: 292 -------------------SNTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                              +   G+ +G     L      + + +I I + + ++ ++G 
Sbjct: 300 EGTYPVRAGQGPGGLDGRGAGAIGYRVGVPGDGLKCMFHMMNEARIGIGMAATMLGLAGY 359

Query: 329 RVSLAEAIHYARRRHVSGGI---------------------LIDQPVMKRAIADIALDIA 367
           R SL     YAR R     I                     LI+   ++R +        
Sbjct: 360 RASL----QYARDRTQGRPIVPRSAAGDGKAGKDASAPPVRLIEHADIRRMLLAQKSYGE 415

Query: 368 AATALSFRLANSFDEAKSRSEEAA-YAR----IMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A AL+   A   DE  + S EAA  AR    ++ PI K W  +      + A++  GG 
Sbjct: 416 GALALNLYCARLVDEQHTGSPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQIHGGY 475

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSS 479
           GY  +  + +++R++  N I  G+     +D+L    ++E G  L  QL          +
Sbjct: 476 GYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVVMEGGRGL--QLL---------A 524

Query: 480 GKKVITILR--DSISLCKEDKGLARFLTEKIALASSAA 515
           G+   TI R  +   L      LAR L E +  A+ AA
Sbjct: 525 GRVNATIQRAMERPELAAHANELARALAE-VGAATKAA 561


>gi|118151232|ref|NP_001071544.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Bos taurus]
 gi|75775518|gb|AAI05214.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Bos taurus]
          Length = 594

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++    +D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 179 LTEPASGSDAASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVK 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 239 DKITAFIVERDF-GGVTNG----KAEDKMGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 293

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S    V+GM   L E    YA  R      L +  +++   + +
Sbjct: 294 VAVNILNSGRF-----SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFSLM 348

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D       S EAA  ++ +     W C      ++EA++ +G
Sbjct: 349 AQKAYVMESMAYLTAAMLDAPGFPDCSIEAAMVKVFSS-EGAWTC------VSEALQILG 401

Query: 421 GSGYIEERSIARHYRES 437
           G GY+ +    R  R+S
Sbjct: 402 GLGYMRDYPYERLLRDS 418


>gi|91786496|ref|YP_547448.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91695721|gb|ABE42550.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 414

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+ A+ +      DG + L+G K W  +  ++D ++  A+ E   G   +  
Sbjct: 134 LSEADAGSDVGAMQTSATHTGDG-WALNGSKTWISNGGIADFYVTFAKTEPDAGTRGITA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVE-----LEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            + D    GL        I     AT++     L  S   G L G   ++      M+ L
Sbjct: 193 FIVDAPTQGLDSGEAIAVISPHPLATLKFTHCRLADSTQLGTLHGGFKLA------MQTL 246

Query: 316 -IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            I+  S   +  GM R +LAEA+ +A+ R + G  L D  + +  + ++A  + AA  L+
Sbjct: 247 DIFRASVAGAALGMARRALAEAVQFAQARKMFGQTLADFQLTQAKLGEMAALVDAAALLT 306

Query: 374 FRLA 377
           +R A
Sbjct: 307 YRAA 310


>gi|313113540|ref|ZP_07799129.1| butyryl-CoA dehydrogenase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624267|gb|EFQ07633.1| butyryl-CoA dehydrogenase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 391

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 65/324 (20%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKI---- 221
           TP     + PK+ S E+              +G  GLTE   GTD     +QGQ+     
Sbjct: 103 TPEQKAKYLPKLCSGEW--------------LGAFGLTEPGAGTD-----AQGQQTFAKQ 143

Query: 222 --SDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GR----VGCFLVPRLLEDGSPN 268
               G + L+G K F+++   ++ FI++A  +      GR       F+V R     +  
Sbjct: 144 DPETGDWILNGSKIFITNAGYANVFIVIAVTDIVPDKKGRPTKQCSAFIVER-----TDP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G    + ++K+G R ++T EL F +         G       ++   ++  +I I    A
Sbjct: 199 GFSVGKAEDKMGIRGSSTCELIFEDCRIPADRMLGVRGRGFQLAMATLDGGRIGI----A 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA---- 377
             ++     +L E + Y + R   G  +      +  +A++   + AA  L +  A    
Sbjct: 255 SQALGIAEGALEETVAYVKERKQFGRSISAFQNTQFELAEMKARVEAAKYLVYAAALKKQ 314

Query: 378 NSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D  K R S EAA A+++A        + A  V    ++  GG GY  +  I R  R+
Sbjct: 315 EAMDGKKVRYSVEAAQAKLIA-------ARTASDVTRRCLQLFGGYGYTRDYPIERMMRD 367

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+    ++ +   L K
Sbjct: 368 AKITEIYEGTSEVQMMVISGALLK 391


>gi|238755619|ref|ZP_04616955.1| Acyl-CoA dehydrogenase fadE20 [Yersinia ruckeri ATCC 29473]
 gi|238706132|gb|EEP98513.1| Acyl-CoA dehydrogenase fadE20 [Yersinia ruckeri ATCC 29473]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 44/278 (15%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----- 247
           K  +   + +TE  GG+D A + +   +  D  Y ++G K F+++ ++   I+ A     
Sbjct: 113 KGELIAAIAVTEPNGGSDSADLETTAVR-QDQHYVVNGQKSFITNGINADLILTAVRTSK 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
              GR    LV      G   G   +    K+G  ++ T  L FSN       L+G  N+
Sbjct: 172 AERGRGISLLVIERDTAGFTRGAPLK----KLGWHASDTANLHFSNCLVPCNNLIGKENI 227

Query: 305 STG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354
                    P E + I      + ++V+   + L   + + ++RH  G     QPV    
Sbjct: 228 GNFYFMGGMPRERLSI------STVAVATAELLLERTLEWVKKRHAFG-----QPVGSFQ 276

Query: 355 -MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVI 412
             +  +A++  ++  A      L ++ D+   R    A  ARI     K W  ++   V 
Sbjct: 277 HNRFRLAELDTNVRIA---RIYLNDAIDKFNRRELNVADAARI-----KLWTTELQIQVA 328

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + M+  GG+GY+ +  I + +  S   +I  G+   +
Sbjct: 329 DQCMQLHGGAGYLSDSFIGKTWVNSRVQTIYGGTSEVL 366


>gi|118470733|ref|YP_886441.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172020|gb|ABK72916.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 406

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIM----LAQVEGR-- 252
           + +TE   G+D AA+++    + DG  Y ++G K F+++      I+    L +  GR  
Sbjct: 136 MAITEPGFGSDSAAVSTTA--VLDGDEYVINGEKIFVTAGSRATHIVVWATLDKSLGRAA 193

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD--LNVSTG 307
           +  F+VPR        G+  +RL+ K+G +++ T  + F N       LLGD  ++V  G
Sbjct: 194 IKSFIVPR-----EHPGVTVERLERKLGIKASDTAVIRFENVRIPKDNLLGDPEIHVEKG 248

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQPVMKRAIAD--- 361
               M+     D+    V+ M V +A A +   R      G+ I  D+P   ++ A    
Sbjct: 249 FAGVMETF---DNTRPIVAAMAVGIARAALEDLRAILTDAGVEISYDKPAHAQSAAAAEF 305

Query: 362 --IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  A   L+ R A   D     S+EA+  +  A        ++A  +  +A+E  
Sbjct: 306 LRMEADWEAGYLLTVRSAWQADNNIPNSKEASMGKAKA-------ARVASDITLKAVEMA 358

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G +GY E+  + +  R+S    I  G+
Sbjct: 359 GTTGYSEQTLLEKWARDSKILDIFEGT 385


>gi|282864441|ref|ZP_06273497.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560928|gb|EFB66474.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 402

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 7/222 (3%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D A + +  ++  DG  + L+G K W  
Sbjct: 120 FGSEEQKQRWLPGMAAGETIGCFGLTEPDHGSDPAGMRTYAER--DGTDWILTGRKMWIT 177

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A+ +   G   +   +      G     +++K   R++ T EL      
Sbjct: 178 NGSVAGVAVVWARTDETAGGSGIRGFVVPTDTPGFSAPEIRHKWSLRASVTSELVLDGVR 237

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L  +TG    +  L +    I+  ++   R S   A+ YAR R   G  +    
Sbjct: 238 LPADAVLPEATGLRGPLSCLSHARYGIVWGAMGAARASFEAAVDYARTREQFGRPIGGFQ 297

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +  +AD+A+++     L+  L    D  + R E+ ++ ++
Sbjct: 298 LTQAKLADMAVELHKGILLAHHLGRRLDAGRLRPEQVSFGKL 339


>gi|68536635|ref|YP_251340.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577836|ref|ZP_05845770.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264234|emb|CAI37722.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604063|gb|EEW17306.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 389

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 49/280 (17%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
           G GLTE   G+D A  T    K+  G + ++G K F+++  +D  + +    V G+    
Sbjct: 129 GFGLTEPEAGSD-AGGTKTTAKLDGGEWVINGSKQFITNSGTDITSLVTATAVTGQRENG 187

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +   +VP     G+P G   +   NK+G  ++ T  L F N               F
Sbjct: 188 KKEISAIIVP----SGTP-GFTAEPSYNKVGWNASDTHPLTFDNVRVPEENLVGERGRGF 242

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            + L  L       E+ +I      A ++    +  + E + YA+ R   G  + +   +
Sbjct: 243 AYFLSIL-------EEGRIA----IAALATGAAQGCVDECVRYAKERTSFGKPISEYQAI 291

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              IA +      A    +  A      ++ S+EA+ A+++A        + A     +A
Sbjct: 292 SFKIARMEARAWTARQAWYAAAAKMAAGENFSKEASIAKMVA-------SEAAMDNARDA 344

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +  GG G++ E  +ARHYR+S    + +G G   V  +L
Sbjct: 345 TQIHGGYGFMNEYRVARHYRDSKI--LEIGEGTTEVQQML 382


>gi|227548732|ref|ZP_03978781.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079199|gb|EEI17162.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 396

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 79/371 (21%), Positives = 144/371 (38%), Gaps = 47/371 (12%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHK 134
           A +  PQ++      + W+K E++ PA     RR  I DG+           +  ++   
Sbjct: 39  AKWVHPQVN------DAWEKAEYNIPAIEEAARRGLIRDGI----------DIEGERPMS 82

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           IRA RL     LE     + + T+  + A +    ++      + S E       PM + 
Sbjct: 83  IRANRL---VALELARCDASTATAVIVQAGLAMQSINS-----LGSEEQKKKYLGPMARM 134

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
            +     LTE   G+D  A+ +  ++  D        KW     +    ++ A+++ G V
Sbjct: 135 EIRGAFALTEPDHGSDSVALETTAKRDGDDWVINGEKKWIGHGSVGHIAVVWARMDDGEV 194

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G F+V     D   +G   + ++ K   R      +  +N     + D     G      
Sbjct: 195 GGFIV-----DQDADGYHAETIEGKASLRGIPQAHITLNNV---RVPDDRRLPGARSFRD 246

Query: 314 ILIYLDSAIMSVS----GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               L    + V+    GM +   E A+ YA  RH  G  L    ++++ +AD+ +D+ +
Sbjct: 247 TAAVLGGTRLGVAWSALGMAIDCYEKALKYATERHQFGRPLNKNQIIQQRLADMLMDVTS 306

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 RL    +  +   ++AA A++          + A  V A A +  GG G + E 
Sbjct: 307 MALYCKRLLELEETGQLNEKQAALAKVH-------NTRAARRVAANARDMFGGVGILLEN 359

Query: 429 SIARHYRESPA 439
            + RH+ +  A
Sbjct: 360 DVIRHFADIEA 370


>gi|94495180|ref|ZP_01301761.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425446|gb|EAT10466.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 385

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 128/306 (41%), Gaps = 46/306 (15%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A + T      W P I S E               + + +TE   G+D+A + +  
Sbjct: 96  APYIAKLGTDEQKDRWMPGIVSGEK-------------ILAVAMTEPSTGSDLAGMRTSA 142

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQ 273
               D  + L+G K ++S+  ++D  ++ A+ +      +G  +V R +E     G    
Sbjct: 143 VDKGDH-WLLNGAKTYISNGILADLVVVAARTDPNSRHGLGLMVVERGME-----GFERG 196

Query: 274 RLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY------LDSAIMS 324
           R   K+G ++  T EL F++     G +LGD      P +  K L        L +AI  
Sbjct: 197 RKLAKMGLKAQDTAELFFNDVRVPKGNVLGD------PAQGFKYLARFLAQERLVAAIGF 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  + +    + Y + R   G  +      +  +A +  ++ A      +     +  +
Sbjct: 251 MATAQTAFDITLDYVKERRAFGKPIGAFQNTRFKMASMRAELDALQTYVDQCVMLLNAGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +E+A+ A+++         ++   V+ E ++  GG+GY+EE  I+R Y ++  + I  
Sbjct: 311 LTAEDASAAKLL-------TSELEGRVMDECVQLHGGAGYMEEYRISRMYTDARISRIFA 363

Query: 445 GSGNAM 450
           G+   M
Sbjct: 364 GTSEIM 369


>gi|332293462|ref|YP_004432071.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171548|gb|AEE20803.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 604

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 56/299 (18%)

Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSS 237
           N+A  QK    +  G       LTE   G+D  +  ++     DG  Y +SG K W  ++
Sbjct: 131 NEAQKQKYVPKLATGEWFGAYCLTEPGAGSDANSGKTKAVLSEDGKSYKISGQKMWISNA 190

Query: 238 PMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
              + FI+ A++E    +  F+V    E+   NG+     + K+G  S++T ++ F++T 
Sbjct: 191 GFCNLFIVFARIEDDKNITGFIV----ENDPSNGITLGDEEKKLGIHSSSTRQVFFNDTV 246

Query: 295 -------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
                        F   +  LNV           I L +A +     R  + EA+ YA+ 
Sbjct: 247 VSAENMLSERGNGFKIAMNALNVGR---------IKLAAACLDAQ--RRVVNEAVTYAKE 295

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA--------------NSFDEAKSRS 387
           R      +I+   +K+ IA +A ++    + S+R A              N+  EA+ + 
Sbjct: 296 RVQFKTPIINFGAIKQKIATMATNVYVDESASYRAAKNIEDRIAMRHAEGNTHQEAELKG 355

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E  YA I   I K    +       E ++  GG G+  +  +   +R++    I  G+
Sbjct: 356 VE-EYA-IECSILKVAVSEDVQNTTDEGIQVFGGMGFSADAPMESAWRDARIARIYEGT 412


>gi|302524283|ref|ZP_07276625.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302433178|gb|EFL04994.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 387

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 29/274 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           L+E+  G+D A++ ++ +   D  + L+G K W  ++  S  + ++A  +         +
Sbjct: 129 LSEREAGSDTASMRTRARLDGDH-WVLNGTKCWITNAGESSWYTVMAVTDPNAEKKANGI 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V +        G      + K+G + + T E+ F N    +  D  +   P   +K
Sbjct: 188 SAFVVHK-----DDPGFSVGPKEKKLGIKGSPTREIYFENCT--IPADRIIGE-PGTGLK 239

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  LD    ++    + +A+     A+ Y + R   G  + D   ++  +AD+   I 
Sbjct: 240 TALRTLDHTRPTIGAQALGIAQGALDAAVAYVKERKQFGKAIADFQGIQFMLADMGTKIE 299

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A + +    R      A   A   K +   +A +V  +A++  GG+GY  +
Sbjct: 300 AARHLVYASAAASERGDKR------ASFTASAAKAYASDVAMSVTTDAVQLFGGAGYTRD 353

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             + R  R++    I  G+     + +   L KG
Sbjct: 354 FPVERMMRDAKITQIYEGTNQIQKVVMARALLKG 387


>gi|239815898|ref|YP_002944808.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802475|gb|ACS19542.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 617

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 70/347 (20%), Positives = 139/347 (40%), Gaps = 68/347 (19%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQ 248
           L+E + G+ ++ + ++     DG         Y L+G+K ++S+   +       I+LA+
Sbjct: 159 LSEPQAGSSLSDVATRAVPDGDGYQGDPLGPRYRLTGNKMWISAGDHELTENIVHIVLAK 218

Query: 249 V---EGR-------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF- 291
           +    G+       +  F+VP+ + +      G  N +    L +K+G R      L F 
Sbjct: 219 IPDANGKLVPGTRGISLFIVPKRMVNTQGELTGERNDVALAGLNHKLGWRGTTNTLLNFG 278

Query: 292 ---------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                    +   G+L+G+    L+     + + +I +   + ++ ++G   SL  A   
Sbjct: 279 EGKYPVGGKAGAVGYLVGEPGKGLHCMFHMMNEARIGVGTAATMLGMAGYYASLDYAKTR 338

Query: 339 ARRRHVSGG----------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + R V                    +I+   ++R +         A AL    A   DE
Sbjct: 339 PQGRLVKKAEQPGTAVAKDSASPQVRIIEHADVRRMLLAQKAYCEGALALELYCARLVDE 398

Query: 383 AKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            K+   +AA        ++ PI K W  +      + A++  GG GY  +  + +++R++
Sbjct: 399 QKTGDAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDN 458

Query: 438 PANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGK 481
             N I  G+      D+L    L+EKG  L + L   + + +G + K
Sbjct: 459 RLNMIHEGTHGIQAADLLGRKVLMEKGRGL-QLLGGRIAETIGHAAK 504


>gi|194385004|dbj|BAG60914.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 6/89 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
            GLTE   G+D +++ ++     S+  Y L+G K W  +SPM+D F++ A+ E   GC +
Sbjct: 144 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 200

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
              LLE G   GL   R++ K   R++AT
Sbjct: 201 RGFLLEKGM-RGLSAPRIQGKFSLRASAT 228


>gi|126669238|ref|ZP_01740147.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126626300|gb|EAZ96985.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 237

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 30/223 (13%)

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG Y L+G K W  +SP++D  ++ A+    + ++  F++ R        G    +++ K
Sbjct: 1   DGGYSLTGAKIWITNSPIADIAVVWAKSAAHDNQIKGFIIER-----GTTGFSTPKIEGK 55

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           +  R++ T E+   N F     LL +++   GP         L+ A   ++   +  AE 
Sbjct: 56  VSLRASVTGEIVLDNAFVPEENLLPNVSGLKGPFG------CLNKARFGIAWGVMGTAEF 109

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A  Y   R   G  L    ++++ +AD+  +I      + ++    D         
Sbjct: 110 CWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQAALQVGRLMDSGN------ 163

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +A  M  + K   C  A  +  ++ +  GG+G  +E  + RH
Sbjct: 164 -WAPEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIRH 205


>gi|302694471|ref|XP_003036914.1| hypothetical protein SCHCODRAFT_80520 [Schizophyllum commune H4-8]
 gi|300110611|gb|EFJ02012.1| hypothetical protein SCHCODRAFT_80520 [Schizophyllum commune H4-8]
          Length = 514

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 62/301 (20%), Positives = 112/301 (37%), Gaps = 49/301 (16%)

Query: 167 TPRVHKDWAPKIFS-REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           TP + +   P+I S ++Y              I L +TE   G+D   + +   +  D  
Sbjct: 228 TPELQERVVPEILSGKKY--------------IALAITEAFAGSDTNGLQTFAVRDGDHW 273

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 KW  +   +D F    + E      L+PR        G+  + +K    + +  
Sbjct: 274 VITGTKKWITNGTFADYFTTGCKTETGFTVILIPR------GEGVSTKPIKTAYSSTAGT 327

Query: 286 T------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAE 334
                  V +   NT G +   +NV         IL   +     VSG      R  + E
Sbjct: 328 AYVTFDKVRVPIGNTLGPVGKGMNV---------ILTNFNHERWMVSGTALGAQRTIVEE 378

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + +A +R V G  L  QPV++  +A++   IA   A    +    D+  + +     + 
Sbjct: 379 CLKWATQRVVFGKPLTAQPVIRAKLANM---IARVEAGQSWMEAVTDQMNNMTYAQMSSN 435

Query: 395 IMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEE---RSIARHYRESPANSILLGSGNA 449
           +  PI   K +  K       +A +  GG G       + +  ++R S  ++IL G+ + 
Sbjct: 436 LAGPIALMKQFISKSGRETAEDATQIFGGRGLTVTGMGKLVENYHRTSGFDAILAGAEDV 495

Query: 450 M 450
           +
Sbjct: 496 L 496


>gi|86130497|ref|ZP_01049097.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85819172|gb|EAQ40331.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 604

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 49/277 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++   + FI+ A++E    +  F+
Sbjct: 153 LTEPSAGSDANSGKTKAVLSEDGKSYKISGQKMWISNAGFCNLFIVFARIEDDKNITGFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312
           V    E+   NG+     + K+G  S++T ++ F++T             PVE+M     
Sbjct: 213 V----ENDPSNGITLGEEEKKLGIHSSSTRQVFFNDT-----------VVPVENMLSDRG 257

Query: 313 ---KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              KI +       +  A   +   R  + EA+ YA+ R      +I+   +K+ +A +A
Sbjct: 258 NGFKIAMNALNVGRIKLAAACLDAQRRVINEAVTYAKERVQFKTPIINFGAIKQKLALMA 317

Query: 364 LDIAAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            ++    + S+R A              N+  EA+ +  E  YA I   I K    +   
Sbjct: 318 TNVYVDESASYRAAKNIEDRISMRQAEGNTHQEAELKGVE-EYA-IECSILKVAVSEDVQ 375

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 376 NTTDEGIQIFGGMGFSADTPMESAWRDARISRIYEGT 412


>gi|239916859|ref|YP_002956417.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838066|gb|ACS29863.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 404

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 24/241 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D  ++ ++ +++ DG + L GHK W  +       ++ A+   + +V  F+V
Sbjct: 149 LTEPTHGSDSVSLETRAERV-DGGWRLHGHKKWIGNGAAGGVTVVWARSAEDEKVRGFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316
            +  E     G   + +K K+  R+     +     F   + D +V       +D   ++
Sbjct: 208 RQESE-----GYTAEVIKGKVALRAIDQAHITLDGVF---VPDADVLPEARSFKDTSRVL 259

Query: 317 YLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           +     ++ S +  ++     A+HYA +R   G  L     ++  +A++   +     L 
Sbjct: 260 FATRVGVAWSALGKAVGCYEAAVHYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQLLV 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R     DE +           MA + KY   + A ++ A A + +GG+G + +  +ARH
Sbjct: 320 LRATRLEDEGRLTGP-------MASLAKYSATRAARSIAANARDLLGGNGILIQNEVARH 372

Query: 434 Y 434
           +
Sbjct: 373 F 373


>gi|326427491|gb|EGD73061.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 424

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           +TE   G+D+A + +  +K  D  + ++G+K W   +  ++ F +LA+ +   + G    
Sbjct: 162 VTEPGCGSDVANVQTFAEKRGDE-WVINGNKAWITGAGHANWFFVLARTDRNAKPGSAFT 220

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
             ++ D    G+   + +  +G R++ T  + F +        +GD+            +
Sbjct: 221 GFVV-DADTAGVILGKKEPNMGQRASDTRTVTFEDAVVPDANRVGDVGFGFKLAMKAFDI 279

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              + A  +V   + +L EA+ Y+  R   G  +I    +   +AD+ + + A+  L+ R
Sbjct: 280 TRPEVAAGAVGVAQRALDEALKYSLERKTFGVPIIGHQAVSFMLADMKMGVDASRWLTLR 339

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  +         A + K +    A     +A++  GG+GY  +  + +  R
Sbjct: 340 SAWELDAGRRPT-------FFASMAKAFAADHAMKCTTDAVQIFGGNGYSSDYPVEKLMR 392

Query: 436 ESPANSILLGS 446
           +     I  G+
Sbjct: 393 DCKIFQIYEGT 403


>gi|145592995|ref|YP_001157292.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302332|gb|ABP52914.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 386

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P       IG   LTE   G+D A++T++ ++  D  + L G K W  ++ ++D  ++ A
Sbjct: 120 PAMAAGETIGCFALTEPDHGSDPASMTTRARRDGDD-WVLHGTKMWITNATIADVAVIWA 178

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  V  F VP      S  G+  + ++ K+  R++ T E+   +        L  + G
Sbjct: 179 RTDEGVRGFAVPT-----STPGVAVREIRRKMSLRASVTGEISLDDVRLPAAARLPDAVG 233

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I+  ++   R  L   + YA  R   G  L    + +  +AD+A++
Sbjct: 234 LKAPLGCLTEARHGIVWGALGAARDCLETTLEYAGSRTQFGRPLAGFQLTQAKLADMAVE 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            +    L+ +L    D  + R ++ +       + K    + A A+  +    +G +G  
Sbjct: 294 WSKGYLLALQLGRLADAHRLRPDQVS-------VGKLNNVREALAIARQCRTILGANGVS 346

Query: 426 EERSIARH 433
            E  + RH
Sbjct: 347 GEYPVLRH 354


>gi|237838837|ref|XP_002368716.1| 2-methylbutyryl-CoA dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|211966380|gb|EEB01576.1| 2-methylbutyryl-CoA dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|221505418|gb|EEE31063.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
          Length = 356

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 136/314 (43%), Gaps = 28/314 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S+ AL+       + A  ++  E       P   +++     L+E   G+D  A+ +  +
Sbjct: 52  SVAALVDIHNTLINRALTLYGTEEQKEKFLPQLASNMLGSFCLSESESGSDAFALKATAR 111

Query: 220 KISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +  +G  + L+G K W  ++  +  F++ A  +   G   +   L +    GL       
Sbjct: 112 RSENGDAWVLNGAKQWISTAREAGLFLVFASYDLDQGYRGITAFLVEAGTAGLEVGPALE 171

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKILI-YLDSAIMSVSGMRVS 331
           K+G ++++T E+        +L D+ V    V     E  KI I  L+   + ++   + 
Sbjct: 172 KLGIKASSTCEV--------ILNDVQVHDSCVLGEVGEGYKIAIRLLNEGRIGIAAQMLG 223

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+     A+ Y   R   G  + D   ++   A +A +I AA  L+   A   +  +  
Sbjct: 224 LAKGAFETAMRYMHDRQQFGRKIADFQGVQFEYAKLATEIEAAALLTANAALLREAGQPF 283

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++EAA A       K+   ++A  V +  ++ +GG+G+ +   + + +R+S   +I  G+
Sbjct: 284 AKEAAMA-------KFKSSEVAQRVSSACIDFVGGNGFTKSFGLEKLFRDSKIGTIYEGT 336

Query: 447 GNAMVLDVLNLLEK 460
            N  +  +  +L++
Sbjct: 337 SNMQLQTIAKVLQR 350


>gi|170750839|ref|YP_001757099.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657361|gb|ACB26416.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 401

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 24/258 (9%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
           AP+    V     +TE    GG+D   I ++ ++  DG Y ++G KW+++ +  ++ FI+
Sbjct: 120 APIVDGRVRSAFAMTEPHPGGGSDPGMIQTRAERRGDG-YVVTGRKWYITGAEEAEHFIL 178

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +A+        L   L     P     +R+            EL F    G  +   NV 
Sbjct: 179 MARTSDDARKGLTAFLFHRDQPGWRILRRIPIMGPEEHGGHCELLFE---GLEIPAENVL 235

Query: 306 TGPVEDMKIL-IYLDSAIMS-------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
               + +K+  I L  A ++       +S   V +A A  YA  RH  G  L D+  ++ 
Sbjct: 236 MREGDGLKLTQIRLGPARLTHCMRWLGLSKRCVEIARA--YAAERHGFGIRLADRESIQL 293

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + D+A+ I     L  + A + D       + ++AR    + K     +  A    A++
Sbjct: 294 MLGDLAMRIEIGRLLVMKAAWALD-------QGSFARKEVSMAKVHVANLLHAAADTAIQ 346

Query: 418 CIGGSGYIEERSIARHYR 435
             G  GY  +  +   YR
Sbjct: 347 INGARGYSTDTPLEWIYR 364


>gi|292386154|gb|ADE22333.1| GalI [Streptomyces galbus]
          Length = 369

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 30/279 (10%)

Query: 181 REYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           R  DP   A   P   +     +  +E R G+D++AI +      D +       W  ++
Sbjct: 91  RLGDPAQAAELLPRLASGDTAAVAFSEPRAGSDLSAIATTVTVDGDTLVLDGLKTWVTAA 150

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--- 294
             +D  +++A++       +VPR        G+  +R+ + +G R+    ++        
Sbjct: 151 EQADLLLVVARMGADGAVVVVPR-----DTPGVQVRRVGDPMGFRAAGHADILLDGVRLP 205

Query: 295 FGFLLGDLNVSTGPVEDMKILIY-------LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
              LLG      G  + + +L+        L  A   V  +R  +A A+ +A  RH  G 
Sbjct: 206 LSSLLG------GGRQPLSLLVTTALAFGRLSVAWGCVGILRACVAAAVGHAASRHQFGR 259

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++ R +AD+      AT      +  +DE    + + + A ++A   KY   + 
Sbjct: 260 PLGRHQLVARHLADLWTGEQIATRACEHASRCWDE---NAADLSAAIVLA---KYVGAEH 313

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A    A A++ +  +G  +   +AR YR++    I+ G+
Sbjct: 314 AARGAATAVQVLASAGARDGHVVARAYRDAKLTEIIEGT 352


>gi|222872083|gb|EEF09214.1| predicted protein [Populus trichocarpa]
          Length = 146

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS- 387
           R +L E +  A+ R + G  L D  + + A+ D+   I A+  L++R A   D  K+R+ 
Sbjct: 20  RRALDEGLARAKSRRMFGQTLGDLQLTQAALGDMDTAIDASALLTYRAAWMRDVKKTRTT 79

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            EAA A++ A        + A AVI  A++  GG+G +    +   YRE  A  I  G+
Sbjct: 80  REAAMAKMTA-------TESAQAVIDRALQMFGGAGVVSGMPVETLYREIRALRIYEGA 131


>gi|197124630|ref|YP_002136581.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196174479|gb|ACG75452.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 580

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 34/266 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGR--VGCF 256
           LTE   G+D A+I +   +  D  + L+G K W  +  ++D F + A+  +EGR  +  F
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDD-WILNGEKLWITNGGIADFFTVFAKTSLEGRGHITAF 210

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           +V R ++     G+     ++K+G R+++T       V +  +N  G       V+    
Sbjct: 211 IVTRDMK-----GVTTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVA---- 261

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MKIL          SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  
Sbjct: 262 --MKILNAGRTGLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCY 319

Query: 368 AATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA ++   +A   D     ++ EAA ++++A  + +           EA++   GSGY+ 
Sbjct: 320 AAESVVNMVAGLVDRGFEETQVEAAISKVLASESVWRTAD-------EALQIAAGSGYMR 372

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E       R++  N I  G+   + L
Sbjct: 373 EMPYEMALRDTRINRIFEGTNEILRL 398


>gi|255513843|gb|EET90108.1| acyl-CoA dehydrogenase domain protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 406

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W  +    EY P     ++K  V    GLTE   G+D A++ +Q +K  D  Y ++G K+
Sbjct: 113 WGTEEQKSEYLPK---AVRKEKV-FAFGLTEPEAGSDPASLKTQYKKEGDR-YIINGTKY 167

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +S+  ++D  ++ A+     G   +  +L D    GL    L+ KIG  ++ T  L+F 
Sbjct: 168 LISNGTIADYILVFARSAENPGT--ISAILVDAKSAGLSRMELREKIGLFTSDTGMLDFE 225

Query: 293 NT 294
           N 
Sbjct: 226 NV 227


>gi|169859356|ref|XP_001836318.1| acyl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
 gi|116502607|gb|EAU85502.1| acyl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
          Length = 514

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 115/282 (40%), Gaps = 31/282 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A +    +++ +G       KW  +   +D F +  + E      LV 
Sbjct: 247 LAITEAFAGSDVAGLRCMAKRVENGWIVTGTKKWITNGTFADYFTVGCRTE---QGGLVV 303

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L+E G   G+  + +K    + +  T  + F N F      L       E+  + + L 
Sbjct: 304 LLIERG--EGVETKPIKTSY-STAAGTAYVTFENVFVPYENTLG-----KENKGLQVILS 355

Query: 320 S--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +           S++  R+ + E + +  +R V G  L  Q V++  +A +   + +A A
Sbjct: 356 NFNHERWGMCTGSIAAQRLVVEECLKWVNQRKVFGKPLHSQAVIRAKLAAMISRVESAQA 415

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEE-- 427
               +    +   + +E+A   ++  PI   K +    A     +A++  GG G      
Sbjct: 416 WLENITYQMNHM-NYAEQA--DKLAGPIALLKRYATSTAQETARDAVQIFGGRGITRTGM 472

Query: 428 -RSIARHYRESPANSILLGS----GNAMVLDVLNLLEKGTNL 464
            R I  ++R  P +++L G+    G+  V   L  + K T L
Sbjct: 473 GRFIEHYHRTVPFDAVLGGAEDVLGDLGVRQALRKMPKDTRL 514


>gi|146277380|ref|YP_001167539.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555621|gb|ABP70234.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 379

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 56/275 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256
           LTE   G+D AA+ ++     +G Y LSG K F+S    SDA++ + +   EG  G    
Sbjct: 124 LTEPGAGSDAAALRTRAVAGPEG-YRLSGTKAFISGGGYSDAYLTMCRTGAEGPKGISTL 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302
           LVP     G+P GL +  L++K+G R+  T +++F +               F + +  L
Sbjct: 183 LVPA----GTP-GLSFGGLEDKMGWRAQETRQVQFDDCAVPAENLVGEEGRGFSYAMAGL 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +              L+ A  ++ G + +    + Y   R   G  L +   ++  +A++
Sbjct: 238 DGGR-----------LNIAATALGGAQAAFDATLSYMSERRAFGRRLDEFQALQFRLAEM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME----C 418
            + +  A     + A   D+              AP    +C     +V   A E    C
Sbjct: 287 EVKLQQARIFLRQAAWKLDQG-------------APDATRFCAMAKLSVTDAAFEVANQC 333

Query: 419 I---GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +   GG GY+ +  I +  R+   + IL G+   M
Sbjct: 334 LQMHGGYGYLADYGIEKIVRDLRVHQILEGTNEIM 368


>gi|289705171|ref|ZP_06501574.1| putative butyryl-CoA dehydrogenase [Micrococcus luteus SK58]
 gi|289558115|gb|EFD51403.1| putative butyryl-CoA dehydrogenase [Micrococcus luteus SK58]
          Length = 395

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 54/269 (20%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEGR 252
           G GLTE   G+D A  T     + DG + ++G K F+++  +D         +   VEGR
Sbjct: 128 GFGLTEPGAGSD-AGGTQTTAALEDGQWRINGAKEFITNSGTDITSLVTVTAVTGTVEGR 186

Query: 253 VG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            G            LVP   E     G    +  +K+G  S+ T  L F+        D 
Sbjct: 187 TGHDGRPAKEISTILVPAGTE-----GFSVAKAYDKVGWNSSDTHALHFT--------DA 233

Query: 303 NVSTGPVEDM---------KILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGI 348
            V   P E++           L  LD   ++++ +        + E++ YA++R   G  
Sbjct: 234 RV---PEENLLGARGRGFANFLEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFGQK 290

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   IA +     AA    +  A      K    EAA A+++A        + A
Sbjct: 291 IGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIA-------GEAA 343

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRES 437
                +A +  GG G++ E  +ARHYR+S
Sbjct: 344 MDNARDATQVFGGYGFMNETLVARHYRDS 372


>gi|134100103|ref|YP_001105764.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291002903|ref|ZP_06560876.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133912726|emb|CAM02839.1| acyl-CoA dehydrogenase, middle domain [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 402

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRV 253
           + +TE   G+D AAI +  +   D  Y L+G K F++S   +DA ++ A ++     G +
Sbjct: 132 MAITEPDCGSDSAAIRTTARLDGDE-YVLNGQKIFVTSGERADAVVVWATLDRSKGRGAI 190

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG--DLNVSTGP 308
             F+V    E G+P G    RL++K+G R++ T E    +       LLG  ++N   G 
Sbjct: 191 KSFVV----EKGTP-GFELVRLEHKLGIRASDTAEFRLDDVRVPKENLLGSPEINTEQGF 245

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGIL--IDQPVMKRAIA----- 360
                ++   D+    V+ M V +A  A+   R +    G+    D+P  +++ A     
Sbjct: 246 A---GVMQTFDNTRPLVAAMAVGVARAALDETREKLTEAGLAPDYDRPPHRQSSAAATFL 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  D  A   L+ + A   D  +  S +A+ A+  A        +    V    +E  G
Sbjct: 303 ELEADWEAGYLLTLQAAWMADNGRPNSLQASMAKAKA-------GRTGTDVTLRCVELCG 355

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R++    I  G+
Sbjct: 356 TLGYSENSLLEKWSRDAKILDIFEGT 381


>gi|312218263|emb|CBX98209.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 513

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 42/268 (15%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +  +  +DG  Y + G  KW  +    D F+   + +      L
Sbjct: 246 LAITEAFAGSDVAGIRTTAKLTADGKHYIVRGTKKWITNGMFCDYFVTGCKTDKGFSVLL 305

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
           + R                    N     ++  +S T G    + N    PV     E+ 
Sbjct: 306 IER------------------DENVETKLIKTSYSTTAGTAFVEYNDVKVPVDHLLGEEH 347

Query: 313 KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K  + + S         A   +   R  + E + +  +R V G  LI+QP +++ +A + 
Sbjct: 348 KGFVVIMSNFNHERFMMACAVIRHSRTVVEECMKWCNQRIVFGKTLIEQPAIRQKLAKMI 407

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGG 421
             + A  A   ++A          +     ++  PI   K +  + A  +  EA+   GG
Sbjct: 408 SHVEANQAWLEQIAYQMSHMSYAQQS---KQLGGPIGLLKSFATRSAHEIADEAVNIFGG 464

Query: 422 SGYIEE---RSIARHYRESPANSILLGS 446
            G  +    R I + +R    ++IL G+
Sbjct: 465 RGLTQSGMGRVIEQFHRTYKFDAILGGT 492


>gi|194290190|ref|YP_002006097.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224025|emb|CAQ70034.1| putative Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 388

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 45/260 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  +K+  G Y +SG K W  ++ ++D  ++LA+          
Sbjct: 124 FGVTEPDAGLDTTKLKTFARKVPGG-YSVSGRKIWISTAQVADRMLLLART--------T 174

Query: 259 PRLLEDGSPNGLC--YQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
           P      S  GL   Y ++ ++KI  R    +     +T    + DL +   P ED    
Sbjct: 175 PLESVKKSTEGLSLFYTKVDRSKIEIREIDKMGRAAVDTNMLFIDDLFI---PDEDRIGE 231

Query: 313 ---------------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                          +ILI    A  ++   R +LA A  YA+ R V G  +     ++ 
Sbjct: 232 EGKGFEYILHGLNPERILI----AAEAIGLGRAALAIATQYAKERVVFGRPIGMNQGVQH 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A   + + +A  +  + A  +D  +S   EA  A+ +A    +  C+ A       + 
Sbjct: 288 PLAQAWMQLESANLMMLKAAARYDAGQSCGAEANAAKYLAAEAGHNACQTA-------IL 340

Query: 418 CIGGSGYIEERSIARHYRES 437
            +GG GY  E  + R  RES
Sbjct: 341 TLGGMGYSREYRVERLLRES 360


>gi|296162997|ref|ZP_06845773.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295886741|gb|EFG66583.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +  ++  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTKIKTTAERRGD-RYVINGQKVWISRVQHSDLMILLARTTPLADVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L +    G+  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFIVD--LHEAIGQGMTVQPILNMVNHETN---ELFFDNLEIPAENLIGEEGQG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   YA+ R V G  +     
Sbjct: 235 FRYILDGLNAE-------RTLI----AAECIGDGYWFVDKVTEYAKERVVFGRPIGKNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + F  A  FD  +    +A  A+++A          A A    
Sbjct: 284 VQFPIARSFINVEAASLMRFEAARRFDAHEPCGAQANMAKLLA----------ADASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 334 ANACLQFHGGFGFACEYDVERKFRET 359


>gi|322697403|gb|EFY89183.1| hypothetical protein MAC_04770 [Metarhizium acridum CQMa 102]
          Length = 439

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 47/265 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   G +   +++  Q+ +DG Y ++G K W   + ++   I+LA+   R      
Sbjct: 165 FGVTEPNAGLNTLGLSTTAQRTADG-YSITGQKIWITCAQVASKMILLARTTPRDRAEKP 223

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  L    L+   P GL  +R+K K+G R+    E+ F N               F  
Sbjct: 224 SEGLSLFCIDLDRARP-GLELRRIK-KMGGRAVDANEVFFDNYQIPASAMIGEQGRGFKM 281

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--- 354
           +L  +N         + L+  ++  +  +    +L++A  YAR R     ++ ++P+   
Sbjct: 282 ILHGMNAE-------RCLLAGEALGLGYA----ALSKAASYARER-----VVFERPIGMN 325

Query: 355 --MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAV 411
             +   +AD  + + AA   ++  A  +D++   +  +     + A   KY   + A   
Sbjct: 326 QGVAHPLADAYVKLEAAKLATYHAARLYDQSTHDANIKQDAVGVAANSAKYVAAEAAFTA 385

Query: 412 IAEAMECIGGSGYIEERSIARHYRE 436
              A+   GG GY  E  + R +RE
Sbjct: 386 CERAVLAHGGMGYAAEYDVERWFRE 410


>gi|196250924|ref|ZP_03149608.1| Acyl-CoA dehydrogenase type 2 domain [Geobacillus sp. G11MC16]
 gi|196209565|gb|EDY04340.1| Acyl-CoA dehydrogenase type 2 domain [Geobacillus sp. G11MC16]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 40/235 (17%)

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           + +G + L G K F S +P  D  ++ A +E  G VG FL P      S  G+  +   N
Sbjct: 52  LRNGRFVLCGRKSFASLAPALDYVLISATIEDSGEVGEFLTPM-----SATGMRIEPTWN 106

Query: 278 KIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSG 327
            +G R+  +       VE+E       L  + +  T P +   + +   YL  AI + + 
Sbjct: 107 TLGMRATRSDDLILDGVEVEKDALVEIL--EKSNETAPAQGWLLHVPACYLGIAIAARN- 163

Query: 328 MRVSLAEAIHYAR--RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 EAI +A+  + +     +   P ++R IA++   +A A    + +A+ +D    
Sbjct: 164 ------EAIRFAQTYQPNTLSHPIASTPEVQRKIAEMEWRLAHARHFLYAIADLWDRYPD 217

Query: 386 R----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +     EE A A+++A  T       A  V+  AM  +GG     +  + R+YR+
Sbjct: 218 KRAEMKEELAAAKLVATNT-------ALEVVDMAMRIVGGQSLFADNPLGRYYRD 265


>gi|149923307|ref|ZP_01911716.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149815847|gb|EDM75368.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 641

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 14/115 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--------- 250
           + +TE   G+D+A + + G++  DG + ++G K F++S  +    ++A+ E         
Sbjct: 187 MDITEPDAGSDMARLRTVGEQDEDGNWFVTGQKIFITSGHAKYHFVIARTEKPGDPDDPM 246

Query: 251 ---GRVGCFLVPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              G +  FLV      ++G        R + K+G+ + AT  + F  T   LLG
Sbjct: 247 AGLGGLSFFLVQTYEDTDEGRERFATIDRAEEKMGHHAAATCAISFDRTPAHLLG 301


>gi|258570563|ref|XP_002544085.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237904355|gb|EEP78756.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 470

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 100/278 (35%), Gaps = 50/278 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQK-----------ISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            GLTE + G+D   + ++ +            + DG       KW   +      I+ A+
Sbjct: 163 FGLTEPKHGSDATFMETKARPARGEYPPGSGAMVDGFILDGAKKWQTGAHHCTHMIIFAR 222

Query: 249 VEGRVG------CFLVPRLLEDGSPNG--LCYQRLKNKIGNRSNATVELEF---SNTFGF 297
             G+ G       FLVP+    G+P    + Y+   N   + +   V   F   S   G 
Sbjct: 223 TSGKSGSSRGITAFLVPK----GTPGVEVVSYEWTFNMPTDHATIAVNSAFVPRSAVLGE 278

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +   L ++   V + +I      A  S    +  L  +I YAR R+V G  L D   ++ 
Sbjct: 279 VDAGLAIAQTFVHENRIR----QAASSCGAAKFCLDRSIEYARSRNVFGKALADNQAIQF 334

Query: 358 AIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARIMAP-------------IT 400
            + ++   +     L  R     D    E   ++++        P             + 
Sbjct: 335 QVVELMTQVEMLRLLILRTGWEMDKIVAECGGQTDKPVAPGGKKPWVEIEKRLSDKVAMC 394

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
            YW  ++       AM+  GG+GY   +    I RH+R
Sbjct: 395 NYWANRLCCQAADRAMQIHGGNGYSRHQPFEHIYRHFR 432


>gi|182416689|ref|ZP_02624648.2| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237667272|ref|ZP_04527256.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           E4 str. BoNT E BL5262]
 gi|182379480|gb|EDT76972.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237655620|gb|EEP53176.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           E4 str. BoNT E BL5262]
          Length = 380

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 20/261 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   GTD A++      +    Y L+G K F+++   +D +I+ A  +   G   +
Sbjct: 123 FALTEPVAGTD-ASMQKTIAVLEGDHYVLNGSKIFITNAGYADTYIVFAMTDKSKGTKGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311
              + +    G      + K+G R+++T EL F N       LLG+     N++   ++ 
Sbjct: 182 SAFIIEKDFPGFSVGSHELKMGIRASSTCELFFDNCIVPKENLLGEEGRGFNIAMATLDG 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +I I    A  ++     ++ E + Y + R   G  +      +  +A +  +  AA  
Sbjct: 242 GRIGI----AAQALGIAEGAIDETVKYVKERVQFGRPISKFQNTQFELAKMRANTEAAKL 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A + D+ +  +  AA A++++          A  V    ++  GG GY  +  I 
Sbjct: 298 LVYQAACAKDDHERFTHLAAMAKLVS-------ANNASDVTRRCLQLFGGYGYTSDYPIE 350

Query: 432 RHYRESPANSILLGSGNAMVL 452
           R  R++    I  G+    ++
Sbjct: 351 RMMRDAKITEIYEGTSEVQMM 371


>gi|220919351|ref|YP_002494655.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219957205|gb|ACL67589.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 580

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 34/266 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGR--VGCF 256
           LTE   G+D A+I +   +  D  + L+G K W  +  ++D F + A+  +EGR  +  F
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDD-WILNGEKLWITNGGIADFFTVFAKTSLEGRGHITAF 210

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           +V R ++     G+     ++K+G R+++T       V +  +N  G       V+    
Sbjct: 211 IVTRDMK-----GVTTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVA---- 261

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MKIL          SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  
Sbjct: 262 --MKILNAGRTGLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCY 319

Query: 368 AATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA ++   +A   D     ++ EAA ++++A  + +           EA++   GSGY+ 
Sbjct: 320 AAESVVNMVAGLVDRGFEETQVEAAISKVLASESVWRTAD-------EALQIAAGSGYMR 372

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E       R++  N I  G+   + L
Sbjct: 373 EMPYEMALRDTRINRIFEGTNEILRL 398


>gi|328545417|ref|YP_004305526.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326415159|gb|ADZ72222.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 392

 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 32/251 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254
           LTE   G+D  ++ +  ++  D  Y L+G K F++ +P +  F ++A+        G V 
Sbjct: 124 LTEPEVGSDAGSVRTTARRDGDS-YVLNGTKRFITNAPHAGLFTVMARTNPDIKGAGGVS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F V    E G P GL   + + K+G +     ++ F N       L+G +    G    
Sbjct: 183 AFAV----EAGVP-GLGLGKPERKMGQQGAHVCDVIFDNCRIPADALIGGVE-GQGFKTA 236

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
           MK+L   D   + ++     LAE I      YA  R   G  + +  +++   AD   D 
Sbjct: 237 MKVL---DKGRLHIAAACTGLAERIIDDMLAYAVGRTQFGRPIAEFQLLQAMFADSKADA 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL    A   D  +  S  AA A       K +  +M   V    ++  GG+GYI 
Sbjct: 294 LAARALVLDAARRRDAGEDVSMAAACA-------KMFASEMVGRVADRNVQVHGGAGYIR 346

Query: 427 ERSIARHYRES 437
           +    + +R++
Sbjct: 347 DYRAEQLFRDA 357


>gi|239995714|ref|ZP_04716238.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii ATCC 27126]
          Length = 255

 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 39/74 (52%)

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +++ R+E +    ++ P+ K W  +  P     A++ +GG+GY  E  + + +R++  N 
Sbjct: 35  DSEKRTELSQLLDLLTPVFKAWPSEFGPKANDLAIQILGGAGYTREYPVEQCWRDNRLNP 94

Query: 442 ILLGSGNAMVLDVL 455
           I  G+     LD+L
Sbjct: 95  IHEGTNGIQALDLL 108


>gi|261419940|ref|YP_003253622.1| acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y412MC61]
 gi|319766754|ref|YP_004132255.1| acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y412MC52]
 gi|261376397|gb|ACX79140.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y412MC61]
 gi|317111620|gb|ADU94112.1| Acyl-CoA dehydrogenase type 2 domain protein [Geobacillus sp.
           Y412MC52]
          Length = 392

 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 37/230 (16%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + L G K F S +P  D  ++ A +E GRVG FLVP      S +G+  +   N +G 
Sbjct: 153 GRWVLRGRKTFASLAPALDYVLISATMEDGRVGEFLVPM-----SASGIRIEPTWNTLGM 207

Query: 282 RSNATVELEFSNT------FGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSL 332
           R+  + +L               LG+ N    P +   + +   YL  AI + +      
Sbjct: 208 RATRSDDLVLEEVEVDQKALVETLGEAN-EAAPAQGWLLHVPACYLGIAIAARN------ 260

Query: 333 AEAIHYAR--RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---- 386
            EA+ +A+  + +     +   P ++R IA++   +  A    + +A+ +D    +    
Sbjct: 261 -EALRFAKTYQPNTLPHPIASTPEVQRKIAEMEWRLTHARHFLYAVADLWDRYPEKRMEM 319

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            EE A A+++A  T       A  V+  AM  +GG     +  + R+YR+
Sbjct: 320 KEELATAKLVATNT-------ALEVVDWAMRIVGGQSLFADNPLQRYYRD 362


>gi|311108387|ref|YP_003981240.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763076|gb|ADP18525.1| acyl-CoA dehydrogenase, middle domain protein 15 [Achromobacter
           xylosoxidans A8]
          Length = 407

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 20/254 (7%)

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + DG + + G KWF++ + ++  FI++A+        L   L +   P     +R+    
Sbjct: 153 LQDGKWRIHGKKWFITGAGVAQHFILMAKTSDDPRKGLTAFLFDADQPGWRIERRIPIMG 212

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS-----VSGMRVSLA 333
                   EL F    G  + D N   G  + +K+  I L  A ++     +   R SLA
Sbjct: 213 PEEHGGHCELVFD---GLEIPDENRLLGVGDGLKVTQIRLGPARLTHCMRWLGLARRSLA 269

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y   R   G  L ++  ++  + + A+ I     L+ R A + D+     +E + A
Sbjct: 270 IARDYVATRQSFGTALAEREGVQWMLGECAMAIEIGRLLTMRAAVALDQGSYARKEVSMA 329

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMV 451
           +I+   T +         +  A++  G  GY  + ++A  YR +    ++ G+   + MV
Sbjct: 330 KIVVSETLH-------KAVDTAIQLTGARGYSRDTALAWIYRYARQARLVDGASEVHKMV 382

Query: 452 LDVLNLLEKGTNLF 465
           L    L+++G   +
Sbjct: 383 LARF-LMDEGDEFW 395


>gi|311108067|ref|YP_003980920.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762756|gb|ADP18205.1| acyl-CoA dehydrogenase, N-terminal domain protein 14 [Achromobacter
           xylosoxidans A8]
          Length = 391

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 17/247 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
           + LTE   GT+  A+ S      DG + L G K W  +   +   +++A+    VEG   
Sbjct: 125 MALTEPDAGTNTLAMKSFAAAQPDGSWRLDGRKIWITAVDAAQKMLVVARTAKPVEGARP 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +   + D    GL Y  ++ K+G ++ +   + F N       L+G L+     + D
Sbjct: 185 TDGISMFIIDVEREGLTYSAIE-KVGTQTLSACSVFFDNVRIEPHELVGTLDKGFRELLD 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAAT 370
           +     + +    V   R++   A+ YA  R V GG  I     ++  +A    ++  A 
Sbjct: 244 VLNTERIVTTASLVGAGRLAERLAVQYANDRKVFGGKPISAYQGLQFPLAQSHAELQCAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++   A+  D+      EA  A+++         + A   I  +M+ +GG GY  E  +
Sbjct: 304 LMNLNAASLCDQGLPYGTEANIAKLIG-------SQAASHAIERSMQTMGGMGYAREFHV 356

Query: 431 ARHYRES 437
            R +R++
Sbjct: 357 ERLWRDA 363


>gi|119504711|ref|ZP_01626789.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459316|gb|EAW40413.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 383

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 53/295 (17%)

Query: 187 NKAPMQK-------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
           N+A  QK         +   + +TE   G+D+  I S      D  Y L+G K F+SS  
Sbjct: 104 NEAQKQKFLPKCISGEIVTAIAMTEPGTGSDLQGIRSSAVDCGDH-YLLNGAKTFISSGQ 162

Query: 239 MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEF 291
            +D  I++ +       G     L+  L+E G P    ++R +N  K+G ++  T EL F
Sbjct: 163 QADVVIVVCRTNDAPDAGAKAFSLL--LVERGMPG---FERGRNLDKVGQKAADTSELFF 217

Query: 292 SNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           ++               F +L+ +L     P E + I     +A  +   M V+      
Sbjct: 218 NDVKVPKENLLGEEGMGFMYLMQEL-----PQERLTIAASAVAATEAALTMTVA------ 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  + D    +  +A +  ++ A      R A         + +A+ A+++A
Sbjct: 267 YVKERSAFGKRIADFQHTQFQLAQLDAEVTAMRTFVDRCAELHLSKALSAVDASKAKLLA 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             T+  C      V+ + ++  GG GY+ E  IAR Y ++    I  G+   M L
Sbjct: 327 --TELQC-----KVVDDCVQMHGGYGYMTEYPIARAYADARVQRIYGGTSEIMKL 374


>gi|209546572|ref|YP_002278490.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537816|gb|ACI57750.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 386

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ---------V 249
           L +TE   G+D+  +    ++ + G + L+G K F+S + ++D  I+ A          +
Sbjct: 122 LAITEPDAGSDMRGMKCAARR-NGGDFVLNGTKHFISHADVADFVIVFAATGEEETPKGI 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           + ++  FLV R    G+P G   ++  + + +R      L F +       +LG+++   
Sbjct: 181 KKKITAFLVDR----GTP-GFEIRKGYDSVSHRGYHNSTLSFEDCRIPEAQVLGEVHRGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A   V   R     A+ YA  R   G  +     +   +AD+  +I
Sbjct: 236 DIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGKPIGANQGVSFKLADMITEI 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A   D       + A A++ A        +M   V  EA++  GG G ++
Sbjct: 296 DAAEWLTLSAAWRLDAGLPADRQIASAKLYA-------SEMLARVTDEAIQIFGGMGLMD 348

Query: 427 ERSIARHYRESPANSILLGS 446
           +  +AR +R++    I  G+
Sbjct: 349 DLPLARFWRDARVERIWDGT 368


>gi|25027285|ref|NP_737339.1| putative glutaryl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259506577|ref|ZP_05749479.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23492566|dbj|BAC17539.1| putative glutaryl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259165775|gb|EEW50329.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 420

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 55/319 (17%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M +LEAG     +V S      MT    H        S E   T    M K  +    GL
Sbjct: 97  MQELEAGDSGLRTVVSVQGSLAMTAIAKHG-------SEEQKQTWLPGMAKGEIIGCFGL 149

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---------- 251
           TE   G+D A++ ++     +G + L+G K W   + ++D  I+ A+V            
Sbjct: 150 TEPTAGSDPASMGTRA-TWENGEWVLNGEKRWIGLANIADVAIIWAKVSDEDARAAGVLA 208

Query: 252 --------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                   +V  F+VP        +G   + +  K+  R++   E+   N    L GD  
Sbjct: 209 GPGSDNGEKVRGFIVPT-----GTDGFHAEAITQKLSMRASIQCEIHMDNVR--LDGDAI 261

Query: 304 VSTGPVEDMKILIYLDS----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----V 354
           +   P      +   ++    A  ++   R S+  AI Y+  R     +  D+P     +
Sbjct: 262 LPKNPGLKGPFMCLNEARFGIAWGALGAARDSIEAAIEYSSTR-----MQFDRPLSSFQL 316

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            ++ +AD+ +++     L+ +L  + D     + + +  ++         C+ A  +  E
Sbjct: 317 TQKKLADMTVELNKGQLLALQLGRAHDAGTLENHQISVGKLAN-------CRTAIEICRE 369

Query: 415 AMECIGGSGYIEERSIARH 433
           A   +GG+G   + S  RH
Sbjct: 370 ARTILGGNGISLDYSPLRH 388


>gi|300789021|ref|YP_003769312.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299798535|gb|ADJ48910.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 32/266 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-----EGRV 253
           + ++E   G+D+A I +   +  D  Y L+G K F++    +D  I++A+      + R 
Sbjct: 124 IAMSEPGTGSDLAGIATTAVRDGDH-YVLNGAKTFITGGYHADLVIVVARTSTDPGDRRH 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G  L   L+      G    R  +K+G     TVEL F++        + V+    E+  
Sbjct: 183 GLTL---LVVAKDLPGFTVGRKLDKLGLTVQDTVELSFADV------RVPVADRLGEEGA 233

Query: 314 ILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              YL            + +V+  R ++   I Y R R V G     QPV      +   
Sbjct: 234 AFSYLGRNLAQERLAITVGAVAQSRAAIDLTIAYVRNRKVFG-----QPVAH--FQNTKF 286

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA  A         D A +       + + A   K +C ++   V+   ++  GG GY
Sbjct: 287 ELAAMAAELEAAQAMLDAAVTAHVAGELSAVDAAKAKLFCTEVQGRVVDRCLQLHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAM 450
           I E  IAR Y ++  + I  G+   M
Sbjct: 347 ILEYPIARLYADARVSRIYGGTSEVM 372


>gi|330985663|gb|EGH83766.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 383

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 31/267 (11%)

Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251
           T  AIG   LTE   G++   + ++     D  + ++G K F+S+   +   I+ A  + 
Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRADLQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175

Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301
           ++G      FLVP         G    R ++K+G R++ T  +  +N       LLG+  
Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230

Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+++   +E  +I I    A  ++   R +   A+ YAR R      +I+   +   +
Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   I A+  L    A      +    EA+ A++ A     W C       ++A++  
Sbjct: 287 ADMHTRINASRLLILHAARLRSAGQPCLSEASQAKLFASEMAEWVC-------SKAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG GY+E+  + R+YR++    I  GS
Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366


>gi|312196848|ref|YP_004016909.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228184|gb|ADP81039.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 352 QPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           QP+ K       IAD+A  + AA  L+   A+ FD       EA  A++ A  T      
Sbjct: 273 QPIWKHQSVGNLIADMATQMRAARLLTTDAADRFDSGARCDLEAGMAKLFASET------ 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A  V  +AM   GG GY +E  + R++R++P   ++LG G 
Sbjct: 327 -AMKVALDAMRVHGGYGYSKEFDVERYFRDAPL--MILGEGT 365


>gi|260555135|ref|ZP_05827356.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411677|gb|EEX04974.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|330501585|ref|YP_004378454.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915871|gb|AEB56702.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 426

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
           E      +LD + ++   + V  A+A       Y   R   G  +  +  +   +ADIA+
Sbjct: 289 EGFDFPAFLDYSALAFCALAVGTAQAALDYVTTYCNERQAFGEPISHRQGVAFMVADIAI 348

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ A   L++R       A +R+E     R  A + +  C + A  + ++A++ +GG G+
Sbjct: 349 ELDAMRLLAWR-------ACARAESGLPFRREAYLARLLCAEKAMKIGSDAVQLLGGHGF 401

Query: 425 IEERSIARHYRESPANSILLG 445
            +E  + R YR+  + ++L G
Sbjct: 402 TQEHPVERWYRDLRSVAVLAG 422


>gi|223940947|emb|CAQ43082.1| hypothetical protein [Chondromyces crocatus]
          Length = 377

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 37/262 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE + G+D  AI +  ++  D +      +W     ++D  ++ A+ +G     LV 
Sbjct: 120 FGLTEPQAGSDPGAIETTAEERGDTLILNGRKRWITFGEIADVLLIFARCQGAPCAVLV- 178

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----------FGFLLGDLNVSTGPV 309
              E   P G+    ++  +G R++   E++  N            GF L  +  S    
Sbjct: 179 ---EADRP-GVSRTPIRGMLGTRASMLAEIDLVNCEVPRENLLARHGFGLSHVAQSA--- 231

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   LD    SV+   V +A A       Y   R   G  L D  +++  + ++ +
Sbjct: 232 --------LDWGRYSVAWGSVGIAHAALEASARYTEERVQFGTKLRDHQLIRAMLTEMHV 283

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA  L       ++  + + +    A +   I KY+  + A     +A++  G SG 
Sbjct: 284 QTKAAALL------CWNAGRLKDQRHPSAILETSIAKYFAARAAMRAATDAVQIHGASGC 337

Query: 425 IEERSIARHYRESPANSILLGS 446
             ++ + R  R++    I+ GS
Sbjct: 338 SADQPVERLLRDAKIMEIIEGS 359


>gi|163794769|ref|ZP_02188739.1| hypothetical protein BAL199_27456 [alpha proteobacterium BAL199]
 gi|159180042|gb|EDP64567.1| hypothetical protein BAL199_27456 [alpha proteobacterium BAL199]
          Length = 393

 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 18/264 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+++        L+E   G+D+AA+T+      +    + G K W  +  ++  +++  +
Sbjct: 120 PVREGRSIAAFALSEPDAGSDVAAMTTTATPDGNDHLRIDGEKTWISNGGIAGHYVVFVR 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE-----LEFSNTFGFLLGDLN 303
                G   +   + D    GL        I     A +      +  SN  G       
Sbjct: 180 TGEAPGARGLSAFVVDADTPGLEIAERIEVIAPHPLARLRFNGCRIPVSNRLGQPGEGFK 239

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V+   ++  +  +       ++   R  L EA+    +R + G  L D  + + A+AD+A
Sbjct: 240 VAMATLDVFRATV----GAAALGFARRGLDEALDRVAKRRMFGAPLADLQMSQAALADMA 295

Query: 364 LDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            ++ AA  L +R A + D   +R + EA+ A       K +  + A  V+  A++  GG 
Sbjct: 296 TEVDAAALLVYRAAWAKDSGAARVTREASMA-------KLYATEAAQRVVDRAVQLHGGL 348

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           G      +   YRE  A  I  G+
Sbjct: 349 GVTTGVKVEELYREVRALRIYEGA 372


>gi|167921973|ref|ZP_02509064.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 377

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 36/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVGCFL 257
           LTE   G++   + ++ + + DG + L+G K F++    + ++  F M    EG+ G  L
Sbjct: 125 LTEPHAGSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRG--L 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              ++   +P G    + + K+G R++ T  +   N     +   N+     E +KI   
Sbjct: 182 SAFVVSTDTP-GFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKI--- 234

Query: 318 LDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              A+ ++ G R+ +A             A  YAR R   G  + +   +   +A++A  
Sbjct: 235 ---ALSNLEGGRIGIAAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATR 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+   A           EA+ A++ A        +MA AV ++A++  GG G++
Sbjct: 292 INAARLLTHHAARLRTAGLPCLSEASQAKLFAS-------EMAEAVCSDAIQIHGGYGFL 344

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + RHYR++    I  G+
Sbjct: 345 ADYEVERHYRDARITQIYEGT 365


>gi|291300500|ref|YP_003511778.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569720|gb|ADD42685.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 406

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 56/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL---TEKRGGTDIAAITSQGQ--KI 221
           TP    +W P+ F    D             + LG    +E   G+D++A+ ++ +  + 
Sbjct: 105 TPEQLAEWVPQCFGDADD-------------VKLGAFCSSEPEAGSDVSAMRTRARYDEA 151

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRL 275
           +D  + LSG K W  +  ++   ++ A V+  +G      F+VP     G+P GL     
Sbjct: 152 TDE-WILSGQKAWATNGGIAHVHVVTASVDPELGSRGQAAFVVP----PGTP-GLSSPTK 205

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGD-------LNVSTGPVEDMK--------ILIY 317
             K+G R++ T ++   +       LLG        L  +  P    K         L  
Sbjct: 206 IKKLGLRASHTADVFLDDVRVPGRCLLGGKEKLDERLARARQPETRTKGQAAMRTFELTR 265

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  +V   R +   A+ YA+ R   G  +ID   +  A+AD+  +I  A  L +R A
Sbjct: 266 PSVAAQAVGVARAAYEYALDYAKERVQFGRPIIDNQAVSFALADMRTEIDCARLLVWRAA 325

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               ++    + E + +++ A        ++A  V  +A++ +GG+G+  +  + R YR+
Sbjct: 326 WMGRNDKPFEAGEGSMSKLKA-------GEVAIKVTEKAVQLLGGAGFSRDHPVERMYRD 378

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 379 AKIYTIFEGT 388


>gi|322508305|gb|ADX03759.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
          Length = 391

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 122 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 180

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 181 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 215


>gi|86142806|ref|ZP_01061245.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85830838|gb|EAQ49296.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 602

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 45/275 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +  +DG  Y ++G K W  ++   + FI+ A++E    +  F+
Sbjct: 153 LTEPGAGSDANSGKTKAELSADGKSYKINGQKMWISNAGFCNLFIVFARIEDDKNITGFI 212

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V    E+ S NG+     + K+G  S++T ++ F++T   ++   N+  G  E  KI   
Sbjct: 213 V----ENDSSNGISLGEEEKKLGIHSSSTRQVFFNDT---VVPVENMLAGRGEGFKI--- 262

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPV-----MKRAIADIALD 365
              A+ +++  R+ LA A   A+RR +  G       +    P+     +K  +A++A +
Sbjct: 263 ---AMNALNVGRIKLAAACLDAQRRIIDMGVKYANERVQFKTPIAQFGAIKYKLAEMATN 319

Query: 366 IAAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
                + S+R A              NS  EA+ +  E  YA I   I K    +     
Sbjct: 320 AYVCESASYRAAKNIEDRIAIRMADGNSHQEAELKGVE-EYA-IECSILKVAASEDMQNC 377

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 378 ADEGIQIYGGMGFSADAPMEAAWRDARISRIYEGT 412


>gi|304311610|ref|YP_003811208.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797343|emb|CBL45563.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 380

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 39/268 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE----GRVGC 255
           +TE   G+D+A I ++   + DG  + ++G K F+++ +  D + + A+ +    G  G 
Sbjct: 127 VTEPGAGSDVAGIKTRA--VRDGNDWVINGSKIFITNGVFGDLYFVAAKTDPGAKGSRGI 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309
            +   ++E G+P G    R   K G RS+ T EL F N       LLG+ N     V   
Sbjct: 185 SIF--IVEKGTP-GFSVGRSLKKHGWRSSDTAELFFDNVRVPVENLLGEENKGFYAVMKN 241

Query: 310 -EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  +I++    A M V   + ++   +   ++R   G  L  + V++  +A +   IA 
Sbjct: 242 FQHERIML----AAMGVGEAQKAIEITLDNVKQRQAFGAPLFSKDVVRDNLARMQTKIAL 297

Query: 369 ATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A    + +A       D  K  S           + K   C++A  V+   ++  GG G+
Sbjct: 298 AQNYLYYVAWLDAQGVDCIKEVS-----------MLKANACEIANEVMYGCVQLHGGMGF 346

Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452
           + E +I R  R+  A  + +G G   ++
Sbjct: 347 MMESTIERMSRD--ARVLTIGGGTTEIM 372


>gi|239933378|ref|ZP_04690331.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291441742|ref|ZP_06581132.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291344637|gb|EFE71593.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 386

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           F  E   T+  P   +  AIG   +TE   G+D  A+T+  ++  D  Y L GHK +++ 
Sbjct: 102 FGSEEQRTSYLPALASGRAIGAHAMTEPGTGSDALALTTTARRDGD-RYVLDGHKRYITN 160

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +P++D F++ A ++  +G   V   L +   +G+       K+G R+ +  ++       
Sbjct: 161 APVADVFLVHATLDRSLGFTGVTAFLVERGDSGIEVTPGSEKLGLRTASWGDVVLDGCRI 220

Query: 297 FLLGDLNVST-GPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G     + + +  + I++  +  MR  L E + Y RRR   G  +    
Sbjct: 221 PASRRLGAEKQGAAIFARTMAFERALILAPWLGVMRRELDECVRYCRRRRQFGKHIGHFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   + D+         + + LA     + +       A +   ++K +  + A  +  
Sbjct: 281 SVSNRLVDM--------RMKWELARLITRSAAAELTGPDAGVHPELSKLYTSEAAVEMFT 332

Query: 414 EAMECIGGSGYIEERSIARHYRES 437
            A++  G  GY  +  + R+ R++
Sbjct: 333 SALQIYGALGYTHDGRVERNLRDA 356


>gi|229590920|ref|YP_002873039.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229362786|emb|CAY49696.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +   +GL  Q 
Sbjct: 147 YVINGQKVWISRIQHSDLMILLARTTPLAEVKKKSEG-MSIFLVD--LREAIGHGLTVQP 203

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 204 IANMVNHETN---ELFFDNLELPLDSLIGEEGKGFKYILDGLNAE-------RTLI---- 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 250 AAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D  K+       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 310 DSGKN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 359


>gi|307726833|ref|YP_003910046.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587358|gb|ADN60755.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 413

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 32/260 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D+AA++   ++  D  Y L G K W  +  ++D +++ A+     G   +
Sbjct: 139 FALSEPEAGSDVAAMSLTAREDGDA-YVLDGEKTWISNGGIADFYVVFARSGEAPGARGI 197

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + D    GL      + I    +    L F+   G  +    +   P E  KI    
Sbjct: 198 SAFVVDADTPGLEIAERIDVIA--PHPLARLRFA---GARVPRSQMLGAPGEGFKI---- 248

Query: 319 DSAIMSVSGMRVSLAEA-IHYARR-----------RHVSGGILIDQPVMKRAIADIALDI 366
             A+ ++   R S+A A + +AR            R + G  L D  + +  +A +AL I
Sbjct: 249 --AMRTLDIFRTSVAAASLGFARHAMAEALARAASRKMFGQTLGDFQLTQARLAQMALTI 306

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++  L +R A   D+ +S + EAA A       K+   + A  VI  A++  GG G   
Sbjct: 307 DSSALLVYRAAWLRDQGESVTREAAMA-------KWHASEGAQQVIDAAVQLYGGMGVQS 359

Query: 427 ERSIARHYRESPANSILLGS 446
             ++   YRE  A  I  G+
Sbjct: 360 GVAVEMLYREIRALRIYEGA 379


>gi|121608179|ref|YP_995986.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552819|gb|ABM56968.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           FG++L  LN         +ILI    A  +V   R +LA A  YA  R V G  +     
Sbjct: 235 FGYILHGLNPE-------RILI----ASEAVGLGRAALARATGYASEREVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A   +++ AA  +  + A  +D+ +    EA  A+ +A    Y  C+        
Sbjct: 284 IQHPLAQSWMELEAAHLMVHKAAWLYDQHRPCGAEANAAKYLAAEACYHACE-------R 336

Query: 415 AMECIGGSGYIEERSIARHYRES 437
           A+   GG GY +E  + R+ RES
Sbjct: 337 AIFTHGGMGYAKEYHVERYLRES 359


>gi|332851737|ref|ZP_08433662.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332865888|ref|ZP_08436668.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332729744|gb|EGJ61079.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332734938|gb|EGJ66024.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|300780647|ref|ZP_07090502.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
 gi|300533633|gb|EFK54693.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
          Length = 402

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 75/362 (20%), Positives = 145/362 (40%), Gaps = 62/362 (17%)

Query: 92  ERWDKVEFH-PAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           E W+K E++ PA     RR  + DG+         +P +      IRA RL    Q+E  
Sbjct: 52  ESWEKAEYNIPAVEEAARRGLVTDGIEID-----GQPGI-----SIRANRLI---QMELA 98

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + + T+  + + +    +      +  S +       PM +  +  G  LTE   G+
Sbjct: 99  RTDASTATAHIVQSGLAMRSI-----SECGSEDQKAKYLGPMSRMEIRGGFALTEPDHGS 153

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP 267
           D   + +  ++  D        KW     +    ++ A+ E  G V  F+V     D   
Sbjct: 154 DSIGLETSARREGDEWVINGEKKWIGHGSVGHITVVWARDEEDGEVKGFIV-----DQDQ 208

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G   + +  K   R      ++        L D+ VS    +D ++     + D+A + 
Sbjct: 209 EGYSAETITGKASLRGIPQAHIK--------LNDVRVS----DDRRLPNSHTFRDTARV- 255

Query: 325 VSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           ++G R+++A            +A+ YA+ R   G  L+   ++++ +AD+  D+ +    
Sbjct: 256 LTGTRIAVAWVALGMAIDCYEKALDYAQLRVQFGRPLVKNQIIQQRLADMLQDVTSMALY 315

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL    +  +   ++AA A++          + A  + A+A +  GG G + E  +AR
Sbjct: 316 CRRLLELEEAGELNEKQAALAKVH-------NTRGARKISADARDMFGGVGILLENDVAR 368

Query: 433 HY 434
           H+
Sbjct: 369 HH 370


>gi|184201925|ref|YP_001856132.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183582155|dbj|BAG30626.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 389

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 39/306 (12%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWA-PKIFSREYD-------PTNKAPMQKTSVAIGLGL 202
           +M      A  +AL     +  DW  P + +   D       P        TSVA     
Sbjct: 73  VMDEEFVRAGHLALGLAFHLQDDWVLPHLLAYGTDEQKQRWLPAILGGEMVTSVA----F 128

Query: 203 TEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           TE   G+D+  + ++   + DG  Y L+G K F+ + +S DA ++LA+ +G       PR
Sbjct: 129 TEPGAGSDLRGVRTR--AVRDGEEYVLNGQKTFIGNGISGDAALVLARTDGGTS----PR 182

Query: 261 ---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
                    L+E     G    +  +K+G +++ T EL F +       L+G+       
Sbjct: 183 GNRDSFSLFLVEKKDHAGYTTGKQLDKMGLQASDTAELFFDDVRVPAANLVGEEGRGLDQ 242

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +      L  A+ +++     L E + +   R+V G  ++D    +  +A+++  + A
Sbjct: 243 ITEQLPQGRLGVAVAAMAVAEGVLGETVEFVSTRNVFGERVLDFQNTQFELAELSAQLEA 302

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A        F+  +          I A   K         ++   ++  GG GYI E 
Sbjct: 303 SQAYVAHCVELFNRGQ-------LDLIAASKIKLQATGTVKDLVDRCLQLHGGFGYILES 355

Query: 429 SIARHY 434
           S+A+ Y
Sbjct: 356 SVAQAY 361


>gi|297161666|gb|ADI11378.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 398

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 20/249 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247
           PM    +    GLTE   G+D AA+ +  ++  DG  + L+G K W  +  ++   ++ A
Sbjct: 133 PMAAGEIIGCFGLTEPDHGSDPAAMRTYAKR--DGSDWVLTGRKMWITNGSVAGVAVVWA 190

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNV 304
           + +  +  F+VP      SP G     +++K   R++ T EL   E       +L ++  
Sbjct: 191 RTDEGIRGFVVP----TDSP-GFSAPEIRHKWSLRASVTSELVMDEVRLPADAVLPEVTG 245

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             GP+  +    Y      S+   R     A+ YA  R   G  +    + +  +AD+A+
Sbjct: 246 LRGPLSCLSHARY-GIVWGSMGAARACFEAALEYAGSREQFGRPIGGFQLTQAKLADMAV 304

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++     L+  L    D    R E+ ++ ++         C+ A  +       +G +G 
Sbjct: 305 ELHKGVLLAHHLGMRMDAGTLRPEQVSFGKLNNVREAIEICRTARTI-------LGANGI 357

Query: 425 IEERSIARH 433
             E  + RH
Sbjct: 358 SLEYPVMRH 366


>gi|18028283|gb|AAL56011.1|AF327351_1 very-long-chain acyl-CoA dehydrogenase VLCAD [Homo sapiens]
          Length = 621

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 32/254 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 180 LTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVK 239

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT      +LG+  V  G
Sbjct: 240 DKITAFIVERDF-GGVTNG----KPEDKLGIRGSNTCEVHFENTKIPVENILGE--VGDG 292

Query: 308 PVEDMKILIYLDSAIMSV-SGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M IL     ++ SV +G+   L E    YA  R      L +  +++   A +A  
Sbjct: 293 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK 352

Query: 366 IAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                ++++  A   D+      S EAA  ++ +    + C       ++E ++ +GG G
Sbjct: 353 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQC-------VSEVLQILGGLG 405

Query: 424 YIEERSIARHYRES 437
           Y  +    R  R++
Sbjct: 406 YTRDYPYERILRDT 419


>gi|169796086|ref|YP_001713879.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213157181|ref|YP_002319226.1| acyl-CoA dehydrogenase, middle domain protein [Acinetobacter
           baumannii AB0057]
 gi|215483541|ref|YP_002325760.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|301345295|ref|ZP_07226036.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301594634|ref|ZP_07239642.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|169149013|emb|CAM86890.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056341|gb|ACJ41243.1| acyl-CoA dehydrogenase, middle domain protein [Acinetobacter
           baumannii AB0057]
 gi|213986265|gb|ACJ56564.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|169633496|ref|YP_001707232.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169152288|emb|CAP01198.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|301512937|ref|ZP_07238174.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|260553901|ref|ZP_05826168.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404933|gb|EEW98436.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|159899987|ref|YP_001546234.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893026|gb|ABX06106.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 395

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 21/280 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238
            +EY     A M+K        LTE   G+D + I +  +   D  Y L+G K W  ++ 
Sbjct: 121 QKEYWLPKLASMEKIGA---FALTEPDNGSDASHIQTTARLEGDH-YVLNGQKRWIGNAS 176

Query: 239 MSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            +D  I+ A+ E   +V  FLV    E G+P G     +  KI  R+    E++  N   
Sbjct: 177 FADVIIVWARDEATNQVTGFLV----EKGTP-GFEATVMHGKIAKRALWNAEIKLENCRI 231

Query: 297 FLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L  +    +   +L       A   V   + +   A+ Y++ R   G  +    +
Sbjct: 232 PASNRLEKARSFKDTAVVLANTRFGVAWEGVGHAQAAYEMALRYSQERKQFGKPIAGYQL 291

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  +  ++ A    ++RL+   D+      +++ A++            A  ++A 
Sbjct: 292 IQEKLVKMLAEVVAMELTTWRLSVLRDQGLMTDGQSSLAKMNN-------SAKARQIVAL 344

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             E  GG+G + E  IARH+ +  A     GS     L V
Sbjct: 345 GREIFGGNGLLLENHIARHFADMEAVYTYEGSNEINTLVV 384


>gi|319763658|ref|YP_004127595.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824077|ref|YP_004387380.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118219|gb|ADV00708.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309449|gb|AEB83864.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 48/323 (14%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTN 187
           +  A L++    E G   + S    ++  L   P VH       K W P     E    N
Sbjct: 66  VTEAALFMRTVAECGGQAAASTIHMNIFGLQ--PVVHFGTEEQKKRWLPPFARGE----N 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
           KA            +TE   G D   +    QK  +G Y +SG K F+S+  ++D  ++L
Sbjct: 120 KA---------CFAVTEPDTGLDTTKLKVTAQKQPNGDYLISGKKVFISTAQVADHMLIL 170

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+         +  + +      L Y +L  K +  R    +     +T    + +L VS
Sbjct: 171 ARTTP------IEEVKKHSEGLSLFYTKLDRKYVDIREIDKLGRAAVDTNEMFIDNLPVS 224

Query: 306 TGPV--EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +  E+ K L Y+           A+  V   R  L  A  YA+ R V G  +     
Sbjct: 225 KDSLIGEEGKGLSYIFHGMNAERVLVAVEQVGIGRAVLKLATQYAKERIVFGRPIGKNQG 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A    ++ AA  + F  A+ +D+ +    EA  A+++A       C+        
Sbjct: 285 VQHPLARSWAELEAANHMIFAAASLYDKGQPCGSEANAAKLLASEACMNACQT------- 337

Query: 415 AMECIGGSGYIEERSIARHYRES 437
           ++   GG GY +E  + R  RE+
Sbjct: 338 SILTHGGFGYAKEYHVERFMREA 360


>gi|193077279|gb|ABO12069.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|184157987|ref|YP_001846326.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332874446|ref|ZP_08442349.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209581|gb|ACC56979.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|323517931|gb|ADX92312.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737290|gb|EGJ68214.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 401

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|116328457|ref|YP_798177.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331189|ref|YP_800907.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121201|gb|ABJ79244.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124878|gb|ABJ76149.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 20/259 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + +TE   G+D+  I +   + SD  Y ++G K F+S+      I+ A         L
Sbjct: 122 LAIAMTEPGAGSDLKNIRTSAVEKSDH-YVVNGQKTFISNGQLANLIITAVKHNNGTMSL 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  ++E+G   G    R   KIG ++  T EL +++    ++   N+     +  + L+ 
Sbjct: 181 L--MVEEGM-KGFERGRRLEKIGLKAQDTSELYYNDV---IVPKENLIGKQGQGFRYLMQ 234

Query: 318 ---LDSAIMSVSGMRVS-LAEAI--HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               +  ++S++ +  + L + I   Y + R   G  +     +K  +A++A ++     
Sbjct: 235 KLATERLVLSIAAVEATALVQKITLQYIKERQAFGKKIGTFQNIKFKMAEMATELEMCRT 294

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              ++       +S + EA+ A       K++  +M      E ++  GG GY+ E  IA
Sbjct: 295 FVDKVTLETIAGRSNTAEASMA-------KWYSTEMQKRHTDECLQFFGGYGYMMEYPIA 347

Query: 432 RHYRESPANSILLGSGNAM 450
           R Y ++   +I  G+   M
Sbjct: 348 RAYLDARIQTIYAGTTEIM 366


>gi|307327728|ref|ZP_07606912.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306886626|gb|EFN17628.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 386

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 126/300 (42%), Gaps = 51/300 (17%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    + W P              +   S+ +  G+TE   G++
Sbjct: 87  VVSPAICG-TVIARFGTAEQKERWLPG-------------LADGSLTMAFGITEPDAGSN 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG-----CFLVPRLLE 263
              IT+  ++   G + L+G K F+S   ++DA +++ + E  R G      F+VPR   
Sbjct: 133 SHRITTTARREEGGGWILNGRKVFISGVDIADATLIVGRTEDARTGKLKPCLFIVPR--- 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYL-- 318
               +G  +  +  ++     A  E +F      +L D+ +    +   ED  +L     
Sbjct: 190 --EAHGFSHHHIPMEL-----AAAEKQFE----VVLDDVRLPADALVGDEDAGLLQLFAG 238

Query: 319 --DSAIMSVS---GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                IM+ +   GM R +L  A+ YAR R V    +     +   +A   +++  A  +
Sbjct: 239 LNPERIMTAAFGLGMGRYALDRAVDYARTRQVWKEPIGAHQAIAHPLAQAHIELELARLM 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A  +D     + + A A   A + KY   +     + +A+  +GG+G   E  +AR
Sbjct: 299 MAKAAYLYD-----TGDDAGAGEAANMAKYAAGEATVKAVDQAVHTLGGNGLTVEYGLAR 353


>gi|300786634|ref|YP_003766925.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299796148|gb|ADJ46523.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 375

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 132/361 (36%), Gaps = 39/361 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLM 152
           WD+    P   AL+RR    GL C      F  P +  QA               AG L 
Sbjct: 29  WDRAGRLPV--ALVRRIARAGLLCPDVPGEFGGPGMSAQA---------------AGELT 71

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + + +  S +  + T +    W  + F          P   T     +  +E   G+D+A
Sbjct: 72  AHAGSLCSSLRSLMTSQGMAAWTLRRFGSRAQRAEHLPRLATGTLAAVAFSEPDAGSDLA 131

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+T++     D         W   S  +D  ++  +        LVP      S  G+  
Sbjct: 132 AMTTRVDVAGDTATVSGAKAWVTGSAYADVLLVFVRHGEGAAVVLVPS-----SAEGVTI 186

Query: 273 QRLKNKIGNRSNATVELEFSNTF----GFLLG---DLNVSTGPVEDMKILIYLDSAIMSV 325
             L+  +G R+     +   +        L G    L   TG V        L  A   V
Sbjct: 187 APLEAPLGCRAAGHAHVRLDDVRVPADAVLAGAGLPLTWLTGSVLTHG---RLSVAWGCV 243

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +R  L  A H+A  R   G  L    ++   +AD+ +   AAT L    +  +D    
Sbjct: 244 GILRACLRAASHHANTRQQFGKPLARHQLVAAHLADLLVAEQAATRLCEHASRCWDLG-- 301

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E A A + A   K +    A A  A A++ +G +G ++   +AR YR++    I+ G
Sbjct: 302 -APELAAAVVTA---KQFAAGAAAAGAASAVQVLGSAGAVDGEVVARAYRDAKLMEIIEG 357

Query: 446 S 446
           S
Sbjct: 358 S 358


>gi|221481451|gb|EEE19837.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
          Length = 356

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 136/314 (43%), Gaps = 28/314 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           S+ AL+       + A  ++  E       P   +++     L+E   G+D  A+ +  +
Sbjct: 52  SVAALVDIHNTLINRALTLYGTEEQKEKFLPQLASNMLGSFCLSESESGSDAFALKATAR 111

Query: 220 KISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +  +G  + L+G K W  ++  +  F++ A  +   G   +   L +    GL       
Sbjct: 112 RSENGDAWVLNGAKQWISTAREAGLFLVFASYDLDQGYRGITAFLVEAGTAGLEVGPALE 171

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKILI-YLDSAIMSVSGMRVS 331
           K+G ++++T E+        +L D+ V    V     E  KI I  L+   + ++   + 
Sbjct: 172 KLGIKASSTCEV--------ILNDVQVHDSCVLGEVGEGYKIAIRLLNEGRIGIAAQMLG 223

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+     A+ Y   R   G  + D   ++   A +A +I AA  L+   A   +  +  
Sbjct: 224 LAKGAFETAMRYMHDRQQFGRKIADFQGVQFEYAKLATEIEAAALLTANAALLREAGQPF 283

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++EAA A       K+   ++A  V +  ++ +GG+G+ +   + + +R+S   +I  G+
Sbjct: 284 AKEAAMA-------KFKSSEVAQRVSSACIDFVGGNGFTKSFGLEKLFRDSKIGTIYEGT 336

Query: 447 GNAMVLDVLNLLEK 460
            N  +  +  +L++
Sbjct: 337 SNMQLQTIAKVLQR 350


>gi|73538346|ref|YP_298713.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121683|gb|AAZ63869.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 45/260 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+TE   G D   + +  +K+  G Y ++G K W  ++ ++D  ++LA+          
Sbjct: 124 FGVTEPDAGLDTTKLKTFARKVEGG-YSVTGRKIWISTAQVADRMLLLART--------T 174

Query: 259 PRLLEDGSPNGLC--YQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312
           P         GL   Y ++ ++KI  R    +     +T    + DL +   P ED    
Sbjct: 175 PLESVKKPTEGLSLFYTKVDRSKIEIREIDKMGRSAVDTNMLFIDDLFI---PEEDRIGE 231

Query: 313 ---------------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                          +ILI    A  ++   R +LA A  YA+ R V G  +     ++ 
Sbjct: 232 EGRGFEYILHGLNPERILI----AAEAIGLGRAALAIATQYAKERVVFGRPIGMNQGVQH 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A   + + AA  +  + A  +D  +S   EA  A+ +A    +  C+ A       + 
Sbjct: 288 PLAQAWMQLEAANLMMLKAAARYDAGESCGAEANTAKYLAAEAGHNACQTA-------IL 340

Query: 418 CIGGSGYIEERSIARHYRES 437
            +GG GY  E  + R  RES
Sbjct: 341 TLGGMGYSREYRVERLLRES 360


>gi|328770929|gb|EGF80970.1| hypothetical protein BATDEDRAFT_11021 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 390

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 112/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258
           +TE   G+D+A   ++  K  D  + ++G+K W  +   ++ F +LA+ +     G    
Sbjct: 130 VTEPGAGSDVAGAKTKAVKKGDK-WVINGNKMWITNGGKANWFFVLAKTDESASAGRAFT 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311
             +++  +P G+   + +  +G R++ T       VE+   N  G +     ++ G  + 
Sbjct: 189 GFIVDSNTP-GITVGKKEMNMGQRASDTRGITFEDVEVPDENRLGDVGQGFKIAMGAFD- 246

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              +     A  +V   R +L EA  YA  R   G  + +   +   +AD+A+ + A+ +
Sbjct: 247 ---ITRPLVAAAAVGLARRALDEATKYAIERTTMGKPIAEHQAIAFMLADMAIGVEASRS 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A   D     +       + A + K    ++A    A+A++  GG+G+  E  + 
Sbjct: 304 LVWKSAWMRDNGLKNT-------LYASMAKAHASEVANKNAADAVQIFGGNGFNSEYPVE 356

Query: 432 RHYRESPANSILLGS 446
           +  R++    I  G+
Sbjct: 357 KLMRDAKIFMIYEGT 371


>gi|307726735|ref|YP_003909948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587260|gb|ADN60657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 380

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 113/242 (46%), Gaps = 22/242 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           ++E   G+++A + ++  +  D  + ++G K W  +   SD  +++  V G  G   +  
Sbjct: 127 ISEPDVGSNVAELKTRAVRDGDH-FIINGEKTWITNGVYSD--VLICTVRGDKG---LSH 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
           +L D + +G   + ++ KI   S +T ++  ++       L+G+     G    MK+   
Sbjct: 181 ILIDRNEHGYESRNIE-KIALSSQSTAQIFITDARVPATNLIGE--EGDGLRNTMKVFET 237

Query: 318 LDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +  +SV  MR +L E+I YA +R   G ++    ++   IA++A+ + AA  +  R
Sbjct: 238 ARAHVGTLSVGIMRAALEESIAYATQRKQFGKLIAAHQLIAAKIANMAIMVDAARLMCQR 297

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +    D       +A+ A+  A       C+       +A++  GG+G  +E ++ R  R
Sbjct: 298 VFGLIDAGVRCDMQASMAKAFATEAAVQVCR-------DAVQLHGGNGITKEFNVERLLR 350

Query: 436 ES 437
           E+
Sbjct: 351 EA 352


>gi|114570096|ref|YP_756776.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340558|gb|ABI65838.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 378

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 32/263 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A + ++  +  D  Y L+G K F+S +  SD ++++ +  G     +   
Sbjct: 124 LTEPGAGSDAAQLRTKAVRDGDD-YVLNGAKAFISGAGTSDYYVVMCRTGGDGPKGISTI 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308
           ++E  +P GL +   + K+G  +  T  + F +              GF L    ++ G 
Sbjct: 183 VVEKDTP-GLSFGANERKMGWNAQPTRVVTFEDCRVPAANLLAEEGMGFTLAMKGLNGGR 241

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +         +    S+ G   +   A  Y   R   G  +    V +  +AD+A ++ A
Sbjct: 242 I---------NIGACSLGGATEAFELAKDYVGTRKQFGREIGQFQVTQFKLADMATELEA 292

Query: 369 ATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  + +R A + D    S ++  A A+  A  T +        V  +A++  GG GY+++
Sbjct: 293 SRMMLYRGAAAIDAGDPSAAKYCAMAKRFATDTCF-------DVANQALQLHGGYGYLQD 345

Query: 428 RSIARHYRESPANSILLGSGNAM 450
             + R  R+   + IL G+   M
Sbjct: 346 YPLERIVRDLRVHQILEGTNEIM 368


>gi|331223443|ref|XP_003324394.1| acyl CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303384|gb|EFP79975.1| acyl CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 439

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 36/271 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
           +TE   G+D+  +++  +K  DG + +     KW  +    D F    +  G+ G     
Sbjct: 164 ITEPSAGSDVKNLSTTAEKSPDGKHWIINGTKKWITNGIWCDYFTTAVRTRGKPGDPSGI 223

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
              ++P+      P+ +   R+K   G   + T ++ F N      +L+G  N      E
Sbjct: 224 SVIVIPK-----GPD-VKVSRMKMG-GVWCSGTSQVVFDNVKVPIDYLVGKEN------E 270

Query: 311 DMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K ++       L+ A  +    RV + +A+ +A +R V G  L++  +++  +  +  
Sbjct: 271 GFKYIMSNFNHERLNIAFSAHRSARVCIEDAMAHATKRKVFGEPLMELSIIRHKLGQMVR 330

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + +  A    L    ++  S +E  A     + + K  C      V  EA++ +GG GY
Sbjct: 331 LVESQHAWIESLVYQLNQL-SDAEGTALLGGQSALLKAHCGITLEFVAREAVQILGGLGY 389

Query: 425 IE----ERSIARHYRESPANSILLGSGNAMV 451
                 ER I R +RE  + SI  GS   M+
Sbjct: 390 TRGGAGER-IERAWREIKSVSIPGGSEEVML 419


>gi|319939085|ref|ZP_08013449.1| glutaryl-coa dehydrogenase [Streptococcus anginosus 1_2_62CV]
 gi|319812135|gb|EFW08401.1| glutaryl-coa dehydrogenase [Streptococcus anginosus 1_2_62CV]
          Length = 402

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 23/262 (8%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+DIA  + +  +++ D  + ++G K W   S  +D   + A+   +G++ C
Sbjct: 144 FALTEPLSGSDIAGGLATTAERVGDK-WIINGEKRWIGGSDTADVIPVFARDVADGKIKC 202

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V +    G+P G   + +++KI  R      +  +N       D  V+    ED+  +
Sbjct: 203 FIVRK----GAP-GYDVEVIQHKIALRCVRNGHITMTNV-EVPDSDRLVNINGFEDVARI 256

Query: 316 IYLDSAIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    A ++   M +   S   A+ Y   R      +    +++  +A +  +  AA A 
Sbjct: 257 LTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAAIAY 316

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S RLA   +        +A A++   +       +    +A A E  GG G   E  +AR
Sbjct: 317 SVRLAEMQEAGNELMLNSALAKMHNSL-------VMRETVALAREVGGGDGITLETDVAR 369

Query: 433 HYRESPANSILLGSG--NAMVL 452
            + ++ A     GS   NA+++
Sbjct: 370 FFADAEAVYTYEGSHEVNALIV 391


>gi|324999680|ref|ZP_08120792.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 400

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 36/265 (13%)

Query: 208 GTDIAAITSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQV-EG------RVGCFL 257
           G+D+AAI ++  + SDG   Y + G K W  +   S+   +L +  EG       +  FL
Sbjct: 135 GSDVAAIKTKAVESSDGSGDYVIDGAKMWLTNGGTSNLTAVLVKTDEGAEKAHQNLTTFL 194

Query: 258 VPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD--LNVSTGP------ 308
           V +    G    GL      +K+G +   T E+ F      + GD  L    G       
Sbjct: 195 VEKPTGYGEVAPGLVIPGKIDKMGYKGVDTTEMVFKGHR--VSGDQILGGERGKGFSHMM 252

Query: 309 --VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             VE  ++ +   +  +++    +     + YA++R   G  +     +   +A++A  +
Sbjct: 253 DGVEVGRVNVAARACGIAIRAFEL----GVEYAQQRSTFGKPIAQHQAISFKLAEMATKV 308

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  +    EA  A+++A  ++Y  CK    V  E+    GG GY +
Sbjct: 309 EAAHLMMVNAARLKDRGERNDVEAGMAKMLA--SEY--CK---EVTEESFRIHGGYGYSK 361

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  I R  RE+P   +L+G G + +
Sbjct: 362 EYEIERLMREAPF--LLIGEGTSEI 384


>gi|313224237|emb|CBY20026.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 39/271 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV--GCF 256
           L +TE   G+D+  I +   +  D  + L+G K F+S   M+D  I++A  +  V    +
Sbjct: 159 LCMTEPGSGSDVQGIKTNAVRDGDD-WILNGSKVFISCGYMADMAIVVAVTDKNVSKAAY 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLL 299
            +   L D +  G    +L  KIG  S  T EL F++                  F FL+
Sbjct: 218 GISLFLVDTNLPGFEKGKLLKKIGRASADTAELFFNDVRLPGNAVLGGEEGVNRGFQFLM 277

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            DL          ++L+ +        G  ++      Y   R   G  LI+   ++  +
Sbjct: 278 HDLGRE-------RLLVAMGCTAQLEKGFELTR----QYVHEREAFGKPLINNQQVRHTL 326

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  +     A++ +   ++       +  +       + KY+  +       +  +  
Sbjct: 327 AEVKTECMVLRAITDKHIEAYANGDLDQQSVS-------MLKYYVSEKMIENTTKLQQLW 379

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  IA+ +  +   SI  G+   M
Sbjct: 380 GGYGYMLEYPIAQMFAGARVESIYAGTTEIM 410


>gi|171913241|ref|ZP_02928711.1| acyl-CoA dehydrogenase domain protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 620

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 18/267 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE+  G+D A + +Q  K +DG  Y L+G K W  +   +   +++A+         
Sbjct: 184 FALTEQDVGSDPARMKTQAVKSADGTHYVLNGEKLWCTNGTKAGVLVVMARTPSPTHPHA 243

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316
               + + S  G+   +  + +G R+     + F +     +   NV  G    +K+ L 
Sbjct: 244 TTAFIVETSMPGVEVVQRCHFMGLRALYNGVMRFHDV---RVPVENVLGGEGRGLKVALT 300

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-IADIALDIAAATALSFR 375
            L++  +++      LA+       R     +   QP+ + A IAD    +AA T  +  
Sbjct: 301 TLNTGRITLPAACAGLAKYCLEVSTRWARDRVQWGQPIGRHAAIADKLARMAAHT-FALE 359

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS------ 429
               +  A    ++ A  R+ A + K W  +    ++ + M+  GG GY    S      
Sbjct: 360 AVVRYVSALVDRDKNADVRLEAALGKLWGSERGWEIVDDTMQIRGGRGYETADSLKSRGE 419

Query: 430 ----IARHYRESPANSILLGSGNAMVL 452
               I R +R++  N+I  GS   M L
Sbjct: 420 KPEPIERFFRDARINTIFEGSSEIMRL 446


>gi|296474629|gb|DAA16744.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Bos taurus]
          Length = 520

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 38/257 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250
           LTE   G+D A+I ++    +D   Y L+G K W  +  +++ F + A+ E         
Sbjct: 179 LTEPASGSDAASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVK 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303
            ++  F+V R    G  NG    + ++K+G R + T E+ F NT        G + G   
Sbjct: 239 DKITAFIVERDF-GGVTNG----KAEDKMGIRGSNTCEVHFENTRVPVENVLGEVGGGFK 293

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADI 362
           V+   +   +      S    V+GM   L E    YA  R      L +  +++   + +
Sbjct: 294 VAVNILNSGRF-----SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFSLM 348

Query: 363 ALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A       ++++  A   D       S EAA  ++ +     W C      ++EA++ +G
Sbjct: 349 AQKAYVMESMAYLTAAMLDAPGFPDCSIEAAMVKVFSS-EGAWTC------VSEALQILG 401

Query: 421 GSGYIEERSIARHYRES 437
           G GY+ +    R  R+S
Sbjct: 402 GLGYMRDYPYERLLRDS 418


>gi|256380353|ref|YP_003104013.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924656|gb|ACU40167.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 27/273 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------V 253
           L+E+  G+D A++ ++ +   D  + L+G K W  ++  S  + ++A  +         +
Sbjct: 129 LSEREAGSDTASMRARARLEGDR-WVLNGTKCWITNAGESTWYTVMAVTDPDAPKKSQGI 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
             F+V +        G      + K+G + + T E+ F N       ++GD    TG   
Sbjct: 188 SAFVVHK-----DDPGFSVGSKERKLGIKGSPTREIHFENCEIPADRIIGDPG--TGLKT 240

Query: 311 DMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ L +    I   +V   + +L +AI Y + R   G  + D   ++  +AD+A+ + A
Sbjct: 241 ALRTLDHTRPTIGAQAVGIAQGALDQAIAYVKDRKQFGRSISDFQGVQFMLADMAMKVEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +  A     AK+   E     I A   K +   +A  V  +A++  GG+GY  + 
Sbjct: 301 ARHMVYVAA-----AKAERGEPDLGFITA-AAKCFASDVAMEVTTDAVQLFGGAGYTRDF 354

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            + R  R++    I  G+     + +   L KG
Sbjct: 355 PVERMMRDAKITQIYEGTNQVQRVVMSRSLLKG 387


>gi|241744197|ref|XP_002405433.1| glutaryl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215505783|gb|EEC15277.1| glutaryl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 390

 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 23/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G++   + ++    S    Y L+G K W  +SP++D F++ A+ + G++  F
Sbjct: 130 FGLTEPNHGSNPGGMETRAVHDSKAKTYTLNGSKTWITNSPIADVFVVWAKCDDGQIRAF 189

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +    LE G+  GL   +++ K   R++ T  +   +        L  S G     + L 
Sbjct: 190 V----LEKGT-KGLEAPKIEGKFSLRASTTGMILMEDVVVPEDALLPKSLGLKSTFQCLT 244

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAAATA 371
              SA   +S   +  AE      R++    I    P+ K     + +AD+  +I+    
Sbjct: 245 ---SARYGISWGALGAAEFCLETARQYTLDRIQFKSPLAKNQLVQKKLADMLTEISLGLQ 301

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              R+    DE K   E       M  + K   C  +  +   A + +GG+G  +E  + 
Sbjct: 302 GCLRVGRLMDEGKVCPE-------MVSLLKRNSCGKSLDIARAARDMLGGNGISDEYHVI 354

Query: 432 RH 433
           RH
Sbjct: 355 RH 356


>gi|257388204|ref|YP_003177977.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170511|gb|ACV48270.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 384

 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 30/261 (11%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     GL ++E   G+D+A + +  +K  D  Y L+G K+++ + +   ++ +   
Sbjct: 116 PVAENEQLTGLAVSEPETGSDMAGMQTTAEKDGDE-YVLNGEKYWIGNGVEADWVTVYAK 174

Query: 250 EG-----RVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            G     R G    F+VP        +G   + +  K+G R++    + F +     + +
Sbjct: 175 TGDDPNNRYGNYSLFIVPT-----DTDGYDAEHIPEKMGFRASKQAHIVFDDC---RVPE 226

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVM 355
            NV         +L  + +   + V+G  + LA A       +   R   G  + +   +
Sbjct: 227 ENVIGHEGAGFYMLAEFFNHGRVIVAGHGLGLAAAAIEEAWEFVHDREAFGKSVDEFQAV 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ ++  +A AL++R A+      +  E+A +   MA   K    +++     + 
Sbjct: 287 QHKLADMRMEFESARALTWRAADKV----ANQEDAGFWAAMA---KTKATEVSTQCAEKG 339

Query: 416 MECIGGSGYIEERSIARHYRE 436
           M+  GG   + E  I+R YR+
Sbjct: 340 MQLHGGRSVLTENRISRVYRD 360


>gi|332520899|ref|ZP_08397359.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332043429|gb|EGI79625.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 602

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 29/268 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +  +   DG  Y ++G K W  ++      I+ A++E    +  F+
Sbjct: 151 LTEPGAGSDANSGKTTAELTEDGKSYKINGQKMWISNAGFCSVMIVFARIEDDKNITGFI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V    E+   NG+     ++K+G R+++T ++ F++T    +   N+  G  E  KI + 
Sbjct: 211 VEYDPENA--NGITLGEEEHKLGIRASSTRQVFFNDT---KVPVENMLAGRGEGFKIAMN 265

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +  A   +   R  L   + YA  R      + D   +K  +A++A +  A  +
Sbjct: 266 ALNVGRIKLAAACLDSQRRILTTGVQYANERKQFKTPISDFGAIKVKLAEMATNAYAGES 325

Query: 372 LSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPAVIAEAMEC 418
            ++R A + ++  +  E A              YA I   I K    +   +   E ++ 
Sbjct: 326 ATYRAAKNIEDRIAMREAAGNTHQEAELKGVEEYA-IECSILKVAVSEDVQSCADEGIQI 384

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG G+ EE  +   +R++    I  G+
Sbjct: 385 FGGMGFSEETPMEAAWRDARIARIYEGT 412


>gi|239625369|ref|ZP_04668400.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239519599|gb|EEQ59465.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 394

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 50/295 (16%)

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYC 227
           R+  D+       EY P      Q  SV     LTE  GGT     T+    + DG  Y 
Sbjct: 96  RILDDYGNDELKAEYMPK----FQDKSVFTCFALTEATGGTGADLHTT---AVRDGDSYI 148

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           L+G K  +S      F  +  V         R+  F VP         G     + + +G
Sbjct: 149 LNGEKTLISHTDCCEFAYVIAVTNPESDKADRLSAFFVPM-----DAPGFEVINMPHMMG 203

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS---------GM 328
            R     +L+F++      +LLG         E   + I L S  +SVS         GM
Sbjct: 204 CRGAGHGDLKFTDCRIDKKYLLGQ--------EGQGLEIALHS--LSVSRAHIAASNLGM 253

Query: 329 RVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              + E ++ YA  R   G  ++ +  +K  +A++ ++I A   + +  A  ++      
Sbjct: 254 AQRMLEMSLKYAADRVTFGKPIVTRQAIKMKLANMQMNIHALRCMVYDFAKDYE----VQ 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPA 439
            +  Y    A + K +       V  E +E  GG GY E+     + R YR+  A
Sbjct: 310 ADGKYIEEKAAMCKLFSIDTVRLVSDEMLEIFGGVGYFEDNPYGPVERMYRDCRA 364


>gi|146302483|ref|YP_001197074.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146156901|gb|ABQ07755.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 601

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 70/321 (21%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    K + PK+ S E+                  LTE   G+D  +  ++    
Sbjct: 125 ITLYGTEEQKKKYVPKLASGEWFGA-------------YCLTEPGAGSDANSGKTKAVLS 171

Query: 222 SDG-IYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            DG  Y ++G K W  ++     FI+ A++  +  +  F+V    E+   NG+     ++
Sbjct: 172 DDGKYYSITGQKMWISNAGFCSVFIVFARIGDDKNITGFIV----ENDPSNGISMNEEEH 227

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------KILIYLDSAIMSVSGMR 329
           K+G R+++T ++ F+ T             PVE+M        KI      A+ +++  R
Sbjct: 228 KLGIRASSTRQVFFNET-----------KVPVENMLSERGNGFKI------AMNALNVGR 270

Query: 330 VSLAEAIHYARRRHVSGGILIDQP------------VMKRAIADIALDIAAATALSFRLA 377
           + LA A   A+RR  SG +                  ++  +A++A +  A  + S+R A
Sbjct: 271 IKLAAACLDAQRRVTSGAVKYANERIQFNTSISSFGAIRSKLAEMATNAYAGESASYRAA 330

Query: 378 NSFD------EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              +      EA+  S + A  +      I   I K    +       E ++  GG G+ 
Sbjct: 331 KDIEDRIAAREAEGTSHQEAELKGVEEYAIECSILKVAVSEDVQNCSDEGIQVFGGMGFS 390

Query: 426 EERSIARHYRESPANSILLGS 446
           E+  +   +R++    I  G+
Sbjct: 391 EDTPMESAWRDARIARIYEGT 411


>gi|240168610|ref|ZP_04747269.1| FadE24 [Mycobacterium kansasii ATCC 12478]
          Length = 473

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + ++  ++ FI+ AQ+ G+   F+V     + S  GL   +    +G R+ 
Sbjct: 259 YRLDGVKSLVPAATAAELFIVGAQLGGKPALFIV-----ESSAKGLSV-KPDPSMGVRAA 312

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E S     L   LG+   + G   +   L  L  A ++V      L   + Y + 
Sbjct: 313 ALGQVELSGVTVPLSARLGEDEATDGDYSEAIALARLGWAALAVGTSHAVLDYVVPYVKE 372

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A       K
Sbjct: 373 RQAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPFAREAALA-------K 425

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG G+ +E  + R YR+
Sbjct: 426 RLGADKGMQIGLDGVQLLGGHGFTKEHPVERWYRD 460


>gi|326389040|ref|ZP_08210622.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206640|gb|EGD57475.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 370

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 19/274 (6%)

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           AL+T P +    A  + +   +    A +      IGL   E     D AAI ++  ++ 
Sbjct: 81  ALVTGPWLAALQAGHVLAAAGEVEGLASLIAGESVIGLAQEEAGTAFDPAAIETRATRVG 140

Query: 223 DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG + L G K  +S   S D  +++A    R G  L   L++  +P       L    G+
Sbjct: 141 DG-WVLDGVKTVVSCAGSLDRLLVVA----RAGEGLSTFLVDKSAPGLFVRDYLLADGGS 195

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPV-EDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T    F+ T G  +G++    GPV E  + L  +  +  +V+ M    A  + Y R
Sbjct: 196 AGDVT----FAATPGVPVGEIG-QAGPVLEQARSLALVALSWEAVAVMDTLRAMTLDYLR 250

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     ++  +A +AL+I  A + +   A+ +   +   E AA A       
Sbjct: 251 TRKQFGIPIGKFQALQHRMATLALEIEQARSAAINAADRYRGDRLERERAASA------A 304

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           K    K+   V  EA++  GG G   E +++ HY
Sbjct: 305 KVTIGKVGSLVAEEAIQMHGGIGMTWELALS-HY 337


>gi|315222948|ref|ZP_07864827.1| acyl-CoA dehydrogenase protein [Streptococcus anginosus F0211]
 gi|315187898|gb|EFU21634.1| acyl-CoA dehydrogenase protein [Streptococcus anginosus F0211]
          Length = 402

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 23/262 (8%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+DIA  + +  +++ D  + ++G K W   S  +D   + A+   +G++ C
Sbjct: 144 FALTEPLSGSDIAGGLATTAERVGDK-WIINGEKRWIGGSDTADVIPVFARDVADGKIKC 202

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V +    G+P G   + +++KI  R      +  +N       D  V+    ED+  +
Sbjct: 203 FIVRK----GAP-GYDVEVIQHKIALRCVRNGHITMTNV-EVPDSDRLVNINGFEDVARI 256

Query: 316 IYLDSAIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +    A ++   M +   S   A+ Y   R      +    +++  +A +  +  AA A 
Sbjct: 257 LTFTRADVAHIAMGITCGSFVAALKYTTNRQQFKRPVAKFQIIQEKLARMQANAVAAIAY 316

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           S RLA   +        +A A++   +       +    +A A E  GG G   E  +AR
Sbjct: 317 SVRLAEMQEAGNELMLNSALAKMHNSL-------VMRETVALAREVGGGDGITLETDVAR 369

Query: 433 HYRESPANSILLGSG--NAMVL 452
            + ++ A     GS   NA+++
Sbjct: 370 FFADAEAVYTYEGSHEVNALIV 391


>gi|183981525|ref|YP_001849816.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium marinum M]
 gi|183174851|gb|ACC39961.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium marinum M]
          Length = 465

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++G+   F+V     + S  GL   +    +G R+ 
Sbjct: 251 YRLDGVKSLVPAAADAELFIVAAQLDGKPALFIV-----ESSAAGLTV-KADPSMGIRAA 304

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E S         LG+   +     +   L  L  A ++V      L   I Y + 
Sbjct: 305 ALGQIELSKVSVPLSARLGEDQATDADYSEAIALARLGWAALAVGTSHAVLDYVIPYVKE 364

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A       K
Sbjct: 365 REAFGEPIARRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPFAREAALA-------K 417

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG GY +E  + R YR+
Sbjct: 418 RLGSDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 452


>gi|226360736|ref|YP_002778514.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239221|dbj|BAH49569.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 395

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 35/279 (12%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVG 254
           ++   LTE   GT  A + S   +  D  Y ++G KW ++ S ++  FI+ A+  +  V 
Sbjct: 127 SVAFALTEPGFGTG-ADLGSTAVRNGDE-YVITGEKWLITNSDIASHFIVFAKTTDSEVS 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FLVPR  E     GL    L   +G +      +   +        +       E ++ 
Sbjct: 185 AFLVPRNTE-----GLSIAALPETMGCKGTEHGRVTLDSVRVPATALVGAEGQGNEHLER 239

Query: 315 LIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            + +    ++ S +  S   L  +I +A+ R   G  +  +  ++R +A++A D+ A   
Sbjct: 240 ALEISRVFIAASSLGTSERALELSIAHAKSRVTFGKPIGTRQAIQRYLAEMATDVYALRG 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A  +D  +    EA+       + K +  +    V   A+   GG GY     I 
Sbjct: 300 ILADAARKWDAGERIPAEAS-------MCKLFGLEAVGRVTDRALLVHGGIGYTRAHPIE 352

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           R YR++                 LN LE+GT   + L +
Sbjct: 353 RLYRDAR----------------LNWLEEGTPTIQYLVA 375


>gi|226304274|ref|YP_002764232.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183389|dbj|BAH31493.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 15/267 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIML 246
           P   T   IG + +TE   G+D+  I  +   + DG  + ++G K F++S  ++D  I++
Sbjct: 125 PGFTTGETIGAIAMTEPGTGSDLRGI--KATAVQDGDTWVVNGTKTFITSGVLADLVIVV 182

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
            +     G   +  L+ +    G    R  +KIG  +  T EL F N       +LG++ 
Sbjct: 183 VRTPRNDGTDALSLLVVESGMPGFERGRQLHKIGLTAQDTAELVFDNVRVPQENVLGEIG 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G + +   L  L  A+ +      ++   + Y   R   G  + +       +AD+A
Sbjct: 243 AGLGYLMESLPLERLGIALAAQMSAEAAMHWTVKYVTERKAFGKTISEFQNTGFVLADLA 302

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I    A   R        K    +AA A++ A        ++   V+   ++  GG G
Sbjct: 303 TRIDMVRAFLDRTVLQHSSGKLSPTDAAKAKLAA-------TELQWDVLDAGLQFHGGYG 355

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ E  IA+ + ++    I  G+   M
Sbjct: 356 YMMEYPIAKAFIDARVQRIYGGTNEIM 382


>gi|225678459|gb|EEH16743.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 442

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 125/314 (39%), Gaps = 46/314 (14%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L     +  +V +   +A   T    +   PK+   EY              I  G+T
Sbjct: 125 AGLAGAQSIHANVYATQPIAKFATAEQRQRMLPKLIVGEYR-------------ICFGVT 171

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGR 252
           E   G D   + ++  K  D  Y +SG K W  S+ ++   ++LA+           EG 
Sbjct: 172 EPNTGLDTLKLRTEAIKDGDS-YRVSGQKIWISSAQVAKRMVLLARTTPLEQVKKPSEG- 229

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309
           +  F +     D    GL  +++K K+G R+    E+ F N   T   L+G+        
Sbjct: 230 LSLFFIDF---DKDAPGLDLRKIK-KMGGRAVDANEVFFDNYRITADTLIGNEG------ 279

Query: 310 EDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  KI++Y    +  +++   +    ++L +A  YA+ R V G  +     +   +AD  
Sbjct: 280 DGFKIVLYGMNAERCLLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQGIAHPLADAY 339

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           + + AA   ++     +D +++       A  +     KY   + A      A+   GG 
Sbjct: 340 MKLEAAKLATYHATKLYDASRTDPTITQKAVGVACNSAKYLAAEAAFTACERAVLAHGGM 399

Query: 423 GYIEERSIARHYRE 436
           GY +E  + R+ RE
Sbjct: 400 GYAQEFHVERYLRE 413


>gi|145590658|ref|YP_001152660.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           arsenaticum DSM 13514]
 gi|145282426|gb|ABP50008.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum arsenaticum DSM
           13514]
          Length = 378

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 124/281 (44%), Gaps = 34/281 (12%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P   +  A+G   L+E   G+D AAI ++ +K   G + ++G K W  S   +D F++ A
Sbjct: 108 PKLASGEAVGAFTLSEPCCGSDAAAIVTRAEK-RGGEWVINGTKTWITSGLYADYFLLFA 166

Query: 248 Q---VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLG 300
           +   +E R   +  FL+ R          C +    ++ G R   T E++ ++      G
Sbjct: 167 RTGSLEARHKAITAFLLRR--------SNCIETTPIEVMGVRGTGTAEVKLNDCRA---G 215

Query: 301 DLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
           D +V        KI ++ ++   ++V  + + +AE     A  YA++R   G  + +  V
Sbjct: 216 DDDVVGEVNGGWKIAMWGINMGRLNVGTIGLGIAEEAFYEAYSYAKKRVAFGKTIAEFQV 275

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++   +    +  +  A   D             + A + K    + A  V+  
Sbjct: 276 IQHYLAEMYARVEMLRSFIYSTAKMKDSGDPNFP------LYAQVAKLMGSRTAVDVVRL 329

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A++  GG GY ++  +   YR++ A  I  G+ N ++L+ +
Sbjct: 330 AVQIQGGYGYSKDSHLEMLYRDAKATEIYEGA-NEIILNTI 369


>gi|145592702|ref|YP_001156999.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302039|gb|ABP52621.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 404

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 127/310 (40%), Gaps = 57/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP    +W P+ F     P   A             +E   G+D+ A+ ++       +Y
Sbjct: 104 TPEQLMEWVPQCFGDLDSPAVAA----------FCTSEPEAGSDVGAMRTRA------VY 147

Query: 227 CLSGHKWFLSSPMSDA--------FIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273
             +  +W LS   S A         ++ A V+  +G      F+VP     G+P GL   
Sbjct: 148 DEAADEWVLSGQKSYATNGGIAGVHVVTASVDPELGSRGQAAFVVP----PGTP-GLAAT 202

Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNV---------STGPVEDMKILIYLDSA 321
           R   K+G R++ T ++   +       LLG  +          S         +   + +
Sbjct: 203 RKLRKLGLRASHTADVFLDDVRVPGRCLLGGKDALDERLARARSGKRAASQAAMRTFELS 262

Query: 322 IMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             +V    + +A A     + YA+ R   G  +I+   +  A+AD+ ++I AA  L +R 
Sbjct: 263 RPTVGAQALGVARAAYEYALDYAKERVQFGRPIIENQAVAFALADMKMEIDAARLLVWR- 321

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             S+    +R    A+      ++K    ++A +   +A++ +GG+G++ +  + R YR+
Sbjct: 322 -ASWMGRNNR----AFTAGEGSMSKLKASEVAVSATEKAVQLLGGAGFLRDHPVERWYRD 376

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 377 AKIYTIFEGT 386


>gi|91786489|ref|YP_547441.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91695714|gb|ABE42543.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 101/266 (37%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPSTGTDTTKIKTTAIKKGD-RYVINGQKVWISRVQHSDWMILLARTTALAEVKKK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L     +G+  + + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFMVD--LRQAEKSGMTVRPIPNMVNHETN---ELFFENLEIPEENLIGQEGLG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      L     Y   R V G  +     
Sbjct: 235 FKYILDGLNAE-------RTLI----AAECIGDGYWFLDRVTKYVGERVVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA+  +++ AA  + ++    FD  +    EA  A+ +A          A A    
Sbjct: 284 VQFPIAEAYIEVEAANLMRYKACALFDAGQPCGAEANMAKYLA----------AKASWEA 333

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  CI   GG G+  E  + R +RE+
Sbjct: 334 ANACIQFHGGFGFANEYDVERKFRET 359


>gi|319784528|ref|YP_004144004.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317170416|gb|ADV13954.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 121/277 (43%), Gaps = 16/277 (5%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           WA +    +Y P    P+        L ++E   G+D+ ++  + +K +D  Y L+G K 
Sbjct: 106 WATQAQKEKYLP----PLCSGERVGALAMSESGAGSDVVSLKLRAEKRND-RYVLNGTKM 160

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  + P ++  ++ A+ +       +   + + +  G    +  +K+G R + T EL F 
Sbjct: 161 WITNGPDAETLVVYAKTDPDQKSRGITAFIVEKAFAGFSVAQKLDKLGMRGSNTGELVFR 220

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGIL 349
           +        L+     VE +   +  +  +++   +  M   L  AI Y   R   G  +
Sbjct: 221 DVEVPFDNVLHEEGRGVEVLMSGLDYERTVLAGGPIGLMAACLDVAIPYVHERKQFGQAI 280

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +++  +AD+   + AA A  + +A + D  ++  ++AA   + A        + A 
Sbjct: 281 GEFQLVQGKLADMYTTLNAARAYVYAVAAACDRGQTTRKDAAGCVLFA-------AEKAT 333

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 334 LMALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGT 370


>gi|302913304|ref|XP_003050891.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731829|gb|EEU45178.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 514

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A + +  +K  DG  Y ++G  KW  +   +D F+   + +  +   L
Sbjct: 247 LAITEAFAGSDVAGLRTTAEKTPDGKHYIVNGTKKWITNGCWADYFVTGVRTDKGLSVVL 306

Query: 258 VPR--------LLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           + R        +    SP  G  Y   +N         V++   N  G     ++V    
Sbjct: 307 IERGEGVETKAIKTSYSPAAGTAYVTFEN---------VKVPVENLLGQENKGIHVILSN 357

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               + ++   S  MS    R  + E + ++ +R V G  LIDQPV+++ +A +
Sbjct: 358 FNHERWMMVCGSLRMS----RSIVEECLKWSNQRQVFGKQLIDQPVIRQKLAKM 407


>gi|163839654|ref|YP_001624059.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162953130|gb|ABY22645.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 113/292 (38%), Gaps = 22/292 (7%)

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           ++EAG   S   T  S+   +    +HK W  +    +Y      PM +  +     LTE
Sbjct: 87  EIEAGD--SGIRTFVSVQGSLAMTAIHK-WGSEAQKEKY----LQPMARGELIGCFALTE 139

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLE 263
              G+D  A+ +   + ++G       +W   + ++D  I+ A V E  V  FLVP    
Sbjct: 140 PEAGSDPGAMRTTAVRTAEGWRLNGAKRWIGLASIADVAIIWAAVPEEGVRGFLVPT--- 196

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             S  G   + +  K+  R++   +++F+         L ++ G       L      IM
Sbjct: 197 --STPGFSAEPITGKLSMRASIQCDVQFNEVELPEDAILPLAKGLRGPFSCLNEARYGIM 254

Query: 324 --SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   R +   A+ YA  R   G  L    + +  + D+ L++     L+       D
Sbjct: 255 WGSMGAARDAFEVALAYAAERQPFGSPLGSYQLTQAKLVDMMLELQKGQLLALHTGRLKD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               R E+ +       + K    + A  +  +A   +GG+G   + S  RH
Sbjct: 315 AGTLRPEQIS-------VGKLNNVREALEICHQARSILGGNGITLDYSPLRH 359


>gi|134102148|ref|YP_001107809.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007600|ref|ZP_06565573.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914771|emb|CAM04884.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 392

 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 33/249 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVG 254
           +TE   G+D   I +  +K  D  + ++G K F++  +   F M+  V        G V 
Sbjct: 129 ITEPGAGSDAKNIRTTARKDGDE-WVINGEKTFITGGIDADFAMVFAVTDKEKGAAGGVT 187

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLV R +      G   + ++  +G R      L F    G  + D N+     +   +
Sbjct: 188 CFLVDRDM------GWKSEPIE-IMGERERQPAALVFD---GVRVPDANILGEQGKGFAL 237

Query: 315 LI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +       YL  A  ++      L   + YAR R   G  + ++  ++  IAD A++I 
Sbjct: 238 AMQWIGRGRYLLPA-RALGNCERLLEMGMDYARSRETFGEPIAERQAVQWMIADSAVEIE 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L  + A   D+          +R    I K +    A  ++   M+  GG GY  E
Sbjct: 297 ALRWLVLQAAWQVDQGMD-------SRHAQSIAKLYGGVRANEIVDRVMQIHGGMGYTRE 349

Query: 428 RSIARHYRE 436
             + R YR+
Sbjct: 350 LPVERWYRD 358


>gi|325089312|gb|EGC42622.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 442

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 64/311 (20%), Positives = 129/311 (41%), Gaps = 40/311 (12%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L     +  +V +   VA   T    +   P++ + +Y              +  G+T
Sbjct: 125 AGLAGAQSIHANVYATQPVAKFATEEQRQQMLPRLIAGDYR-------------VCFGVT 171

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGR 252
           E   G +   + ++  +  D  Y +SG K W  S+ ++   ++LA+           EG 
Sbjct: 172 EPNTGLETLKLRTEAIRDGDS-YRVSGQKIWISSAQVARRMVLLARTTPLEEVKKPSEG- 229

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F +     D    GL  +++K K+G R+    E+ F N   + +   ++     +  
Sbjct: 230 LSLFFIDF---DKDAPGLELRKIK-KMGGRAVDANEVFFDN---YRIPSDSLIGREGDGF 282

Query: 313 KILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI+++    +  +++   +    V+L +A  YA+ R V G  +     +   +AD  +++
Sbjct: 283 KIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNL 342

Query: 367 AAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA   ++   N +D +K+ +S       +     KY   + A      A+   GG GY 
Sbjct: 343 EAAKLATYHATNLYDASKTDKSITQKAVGVACNSAKYLAAEAAFTACERAVLTHGGMGYA 402

Query: 426 EERSIARHYRE 436
           +E ++ R+ RE
Sbjct: 403 QEYNVERYLRE 413


>gi|63002603|dbj|BAD97695.1| Aft10-1 [Alternaria alternata]
          Length = 432

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 15/274 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFL 257
           LG+TE   G+DIA + ++ ++  +        KW  +   +D  I   +    GR G  L
Sbjct: 158 LGITEPEVGSDIANLVTRAEQEGNYFIVNGTKKWVTNGTFADYCIAAVRTGQAGRTGISL 217

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   L+     G+  +++++  G  S  T  + F N       LLG+ N   G    M  
Sbjct: 218 LNIPLDVA---GVSREKIESS-GVASGGTASITFDNVQVPVENLLGEKN--KGFYMLMSS 271

Query: 315 LIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  S I +  +   RV L +A  YA  R   G  LI+   ++  +A+I + I ++ AL
Sbjct: 272 FDHHRSWIAANCLRLARVCLEDAYQYALTRQTFGKPLINHQTIRLKLANIGIQITSSYAL 331

Query: 373 SFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              L         +  +       +  ITK    +     + E+ + +G S Y       
Sbjct: 332 LESLTEMRQNLSVKMGQVHRGIGGLCAITKVAAARTFELAVRESQQIMGASAYTRTGPGL 391

Query: 432 RHYRESPANSIL-LGSGNAMVLDVLNLLEKGTNL 464
           R  R S    +L +G G+  +L  ++++++  +L
Sbjct: 392 RVERLSRDMRVLVIGGGSEEILSEMSVVQEQKDL 425


>gi|302557089|ref|ZP_07309431.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302474707|gb|EFL37800.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 380

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 33/263 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
           + + ++E   G+D+ A+  + ++  DG + + G K W  ++  + + +++A+        
Sbjct: 123 LSIAMSEPGAGSDVGALRCRARRAPDGGWLVDGQKTWISNAHCARSILLVARTGEDKHAG 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-----------VELEFSNTFGFLLGDLNVS 305
           L    L   +P G+  + ++   G   N             V  E    +  L+  LN  
Sbjct: 183 LTMFHLPADTP-GVEIRGIETMGGREVNDVFLTGVRLPDDAVVGEVDGGWKQLMAGLNYE 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     ++L + ++ ++  R +  +A+ Y R R   G  +     ++  IAD+A +
Sbjct: 242 R---------LFLAANMLGLA--RRAFDDAVTYVREREQFGRPVGSFQALRHRIADLATE 290

Query: 366 IAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           I  A  L   +A   D    R    EA+ A++ A  T       A     E M+ +GG G
Sbjct: 291 IECARLLVREVALDCDAQPDRLFPREASMAKLKATET-------AKRAALEGMQMMGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y  E  + RH R +  +++  G+
Sbjct: 344 YTTEFDMERHLRAAVVSTVYGGT 366


>gi|220912175|ref|YP_002487484.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219859053|gb|ACL39395.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 391

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 71/278 (25%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSD--AFIMLAQVEGR- 252
           G GLTE   G+D     +   + S G    + ++G+K F+++  +D    + +  V G+ 
Sbjct: 123 GFGLTEPEAGSDAGGTKTHAHRESVGDKTEWVINGNKEFITNSGTDITRLVTVTAVTGQH 182

Query: 253 ----------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                     +   LVP         G   ++  NK+G  +        S+T    L D+
Sbjct: 183 DRGDGTVRKEISTILVPT-----DTPGFKAEKAYNKVGWNA--------SDTHPLTLKDV 229

Query: 303 NVSTGPV--EDMK----ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
            V    +  E+ +     L  LD   ++++ +    A+     ++ YAR R   G     
Sbjct: 230 RVPEANLLGEEGRGYANFLSILDEGRIAIAALATGAAQGCVDLSVRYARERKAFG----- 284

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMA--PI-TKYWC 404
                        +I    A+SF++A    EA++ +   AY    AR++A  P  T+   
Sbjct: 285 ------------HEIGKYQAISFKIARM--EARAHTARLAYYDAAARMLAGKPFKTQAAI 330

Query: 405 CKMAPAVIA-----EAMECIGGSGYIEERSIARHYRES 437
            KM     A     +A +  GG G+I E ++ARHYR+S
Sbjct: 331 AKMVAGEAAMDNARDATQVFGGYGFINEFTVARHYRDS 368


>gi|315445403|ref|YP_004078282.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263706|gb|ADU00448.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 464

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 31/224 (13%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++GR   FLV     + S +GL        +G R+ 
Sbjct: 246 YRLDGVKSLVPAAADAELFIIAAQLDGRPTLFLV-----EASTSGLTVT-ADPSMGIRAA 299

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           A   +E +     L   LG+ + ST        +   L  L  A ++V      L   I 
Sbjct: 300 ALGRVELAKVTVPLSARLGEEDASTSDAARIYSEAIALSRLGWAALAVGTSHAVLDYVIP 359

Query: 338 YARRRHVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y + R   G     +P+ +R       A+IA+++     +++R A+  ++  S + EAA 
Sbjct: 360 YVKEREAFG-----EPIARRQSVAFMCANIAIELDGLRLITWRGASRAEQGLSFAREAAL 414

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+ +              +  + ++ +GG GY +E  + R YR+
Sbjct: 415 AKKLG-------TDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 451


>gi|113868426|ref|YP_726915.1| putative acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527202|emb|CAJ93547.1| putative acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 389

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 13/242 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             L+E   G+D+AA+    +   DG  Y + G K W  +  ++D + +  +     G   
Sbjct: 128 FALSEPEAGSDVAAMQCSARLSDDGSHYVIDGAKTWISNGGIADFYCVFVRTGEASGARG 187

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILI 316
           +   + D    GL      + +     AT+  +      G  LG+       V  M + I
Sbjct: 188 ISAFVVDADTPGLTIAERIDVMAPHPLATLRFDDCRVPVGNRLGEAGQGF-KVAMMTLDI 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  S   +  G   +  +        R + GG+L D  + + AI D+A  I AA  L++R
Sbjct: 247 FRASVAAAALGFGRAALDDALARACARPMFGGVLADLQLTQAAIGDMATAIDAAALLTYR 306

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A   D    R + EAA A+++A        + A  VI  A++  GG G      +   Y
Sbjct: 307 AAWLRDVKGQRTTREAAMAKMVAT-------ENAQQVIDRAVQMFGGLGVKVGTRVESLY 359

Query: 435 RE 436
           RE
Sbjct: 360 RE 361


>gi|260063229|ref|YP_003196309.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|88783323|gb|EAR14495.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 603

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 121/315 (38%), Gaps = 58/315 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    K + PK+ S E+                  LTE   G+D  +  ++    
Sbjct: 126 ITLYGTEEQKKKYVPKLASGEWFGA-------------YCLTEPGAGSDANSGKTKAVLS 172

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            DG  Y +SG K W  ++   + FI+ A++E     ++   ++E+   NG+     + K+
Sbjct: 173 EDGKHYLISGQKMWISNAGFCNLFIVFARIEDDK--YITGFIVENDPENGISLGDEEKKL 230

Query: 280 GNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G  S++T ++ F+ T              F   +  LNV           I L +A +  
Sbjct: 231 GIHSSSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGR---------IKLAAACLEA 281

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-------- 377
              R    EA+ YA  R      +I+   +K  IA +A +     A  +R A        
Sbjct: 282 Q--RRVTDEAVRYAGERKQFKTAIINFGAIKSKIATMATNAYVGEAACYRAAKNIEDRIA 339

Query: 378 ------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                 NS  EA+ +  E  YA I   I K    +       E ++  GG G+  +  + 
Sbjct: 340 LRVAAGNSHAEAELKGVE-EYA-IECSILKVAVSEDVQETTDEGIQIFGGMGFSADTPME 397

Query: 432 RHYRESPANSILLGS 446
             +R++  + I  G+
Sbjct: 398 SAWRDARISRIYEGT 412


>gi|158314022|ref|YP_001506530.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109427|gb|ABW11624.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 27/273 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           L+E+  G+D A++ ++     D  + L+G K W  ++  S  + ++A  +         +
Sbjct: 129 LSEREAGSDTASMRTRAHLDGDH-WVLNGTKTWITNAGESLWYTVMAVTDPNAAKPANGI 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V          G      + K+G + + T E+ F N    +  D  +         
Sbjct: 188 SAFVV-----RADDPGFEVGSKERKLGIKGSPTREIHFVNCT--IPADRIIGEPGTGLRT 240

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LD    ++    V +A+     AI Y R R   G  + D   ++  +AD+A+ I A
Sbjct: 241 ALATLDHTRPTIGAQAVGIAQGALDAAIGYVRERRQFGRAIADNQAVQFMLADMAMKIEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +  A     A++   E     I A   K +   +A  V  +A++  GG+GY  + 
Sbjct: 301 ARHMVYVAA-----ARAERGEPNLGFITAA-AKCFASDVAMEVTTDAVQLFGGAGYTRDF 354

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            + R  R++    I  G+     + +   L KG
Sbjct: 355 PVERMMRDAKITQIYEGTNQIQRVVMSRALLKG 387


>gi|332530495|ref|ZP_08406436.1| isovaleryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
 gi|332040064|gb|EGI76449.1| isovaleryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
          Length = 416

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 46/281 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---C 255
           L ++E   G+D+ ++  + +   +G Y LSG K W  +   +D  ++ A+ +   G    
Sbjct: 131 LAMSEPNAGSDVVSMKLKAEP-KNGFYLLSGGKMWITNGGDADVLVVYAKTDADDGSPHA 189

Query: 256 FLVPR---------------------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            L P                      ++E G P G  +    +K+G R + T  L F + 
Sbjct: 190 ALPPEGARPPSGGRAAGGGARGMTAFIVEKGWP-GFTHGAKLDKLGMRGSNTYPLFFDHC 248

Query: 295 FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGI 348
               + + NV  G     K+L+  LD     +SG     M   +   + Y   R   G  
Sbjct: 249 ---EVPEANVLGGVGHGAKVLMSGLDYERAVLSGGPLGIMAACMDAVLPYVHERQQFGQS 305

Query: 349 LIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           + +  +M+  +AD+     A  A  +   R  +S   A++  ++AA A + A     W  
Sbjct: 306 IGEFQLMQGKLADMYSTWQACRAYVYAVGRACDSAAHARTLRKDAAGAILYAAEKATW-- 363

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +  EA++ +GG GY  +  + R +R++    I  G+
Sbjct: 364 -----MAGEAIQALGGVGYTRDFPVERLWRDAKLYEIGAGT 399


>gi|317509319|ref|ZP_07966939.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316252375|gb|EFV11825.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 386

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 15/252 (5%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           GL+E+  G+D A++ ++ ++  DG + + G K W  +   S  + ++A  +   G   + 
Sbjct: 130 GLSERGAGSDAASMRTKARRDGDG-WVIDGEKCWISNGSESTWYTVMAVTDPDKGAHGIS 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             +      G      + K+G + + TVEL F +    + GD  +          L  LD
Sbjct: 189 AFIVHRDDEGFSIGNKEKKMGIKGSPTVELLFDHC--RIPGDRIIGEPGTGFKTALQSLD 246

Query: 320 SAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               ++    V +       A  YA+ R   G    D   +   +AD+ + I AA  + +
Sbjct: 247 HTRPTIGAQAVGIAQGALDAAAAYAKERQQFGRPTTDFQGVSFMLADMEMKIQAARLMVY 306

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   +         A +  ++   K +   +A  V   A++ +GG+GY  +  + R  
Sbjct: 307 ASAERAERG------GAGSTALSSAAKCFASDVAMEVTTNAVQVLGGAGYTRDFPLERMM 360

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 361 RDAKITQIYEGT 372


>gi|304310683|ref|YP_003810281.1| Putative acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796416|emb|CBL44624.1| Putative acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 423

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 34/264 (12%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV--------EG 251
           +TE   G+D    + S  ++ SDG Y L+G+K F+++ P +D  I + ++        + 
Sbjct: 158 ITEPNSGSDAFGGMKSLARRTSDGQYVLNGNKTFITNGPYADTIIFICRLDEPDVPPPQR 217

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG- 307
           +V  F+    L+ G P GL       K+G  S+ T EL   +       LLG     +G 
Sbjct: 218 KVLSFI----LDKGMP-GLTQSAPFKKMGIHSSPTGELFLQDVVVGKDRLLGGSEEGSGR 272

Query: 308 -PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +D         A M++  +   L  ++ YA+ R   G  + +  +++  +A + +  
Sbjct: 273 SGAKDTFTTERSGVAAMALGIIERCLELSVKYAKERVQFGRPISEFQLIQLKLAKMEVAR 332

Query: 367 AAATALSFR----LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                + FR    LAN  D+  + +E +A         K +  + A  V  EA++  GG+
Sbjct: 333 VNLQNMVFRHIELLAN--DKRPTLAEASAM--------KLYAAQAAVEVALEAVQIHGGN 382

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY+ E  + +  R+S    I  G+
Sbjct: 383 GYMVEYHVEQLLRDSKILQIYGGT 406


>gi|254383446|ref|ZP_04998797.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194342342|gb|EDX23308.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 383

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 18/256 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D  A+ ++ ++  D  Y L+G K F+S   +    ++    G  G   +   
Sbjct: 126 LTEPGAGSDAGALRTRAERDGD-HYVLTGVKQFISGAGAAGVYIVMARTGEAGPRGISAF 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + +    G+ +   + K+G  +  T       V L      G       ++   +   ++
Sbjct: 185 VVERDDPGVSFGANEQKMGWNAQPTRQVVLDGVRLPADRRLGAEGEGFRIAMNGLNGGRL 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            I    A  S+ G + +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL  
Sbjct: 245 GI----AACSLGGAQSALDRSLSHLADRAAFGARLLDAQALQFRLADMATELAAARALLR 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A + D    ++ E      +  + K +       V  EA++  GG GY+ E  I +  
Sbjct: 301 TAAEALDAGDPKAAE------LCAMAKRFATDTGFTVANEALQLHGGYGYLSEYGIEKIV 354

Query: 435 RESPANSILLGSGNAM 450
           R+   + IL G+   M
Sbjct: 355 RDLRVHQILEGTNEIM 370


>gi|292494885|ref|NP_058682.2| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rattus norvegicus]
 gi|149026289|gb|EDL82532.1| acetyl-Coenzyme A dehydrogenase, medium chain [Rattus norvegicus]
          Length = 421

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC--F 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +L +   + +V     
Sbjct: 160 VTEPSAGSDVAGIKTKAEKKGDE-YVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   + +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIHIGKKELNMGQRCSDTRGITFEDV---RVPKENVLIGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 275 GAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG G+  E  +
Sbjct: 335 LSYQRAAWEVDSGRRNT-------YFASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|114567634|ref|YP_754788.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338569|gb|ABI69417.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 381

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 18/255 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P  K    +    TE   G+D   IT+   K  D  Y L+G K F+S+     A ++ A+
Sbjct: 112 PGCKAKHIVSFAFTEPGTGSDPKQITTTAVKQGD-FYILNGTKRFISNANYPGAMVVFAR 170

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
               G V  F++ +  E     G        KIG      +++   +       LLG + 
Sbjct: 171 EMESGEVTAFILDKWAE-----GYSISEPWEKIGMHGGQLLDVYMKDVKVPADNLLGKIG 225

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               P+  + I L  + ++  ++ G   +L EA  YAR +   G  +     ++  IAD+
Sbjct: 226 QGF-PILLLGIALGKIGTSTAALGGTLAALEEASKYAREKTHRGQPIAKFQAIQLKIADL 284

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+    A  L +RL    ++ K   + AA A ++    K +C          A++  G  
Sbjct: 285 AIKYETARWLCYRLGCLANDIKDPGKFAAEAALV----KAYCGDNVVDAARIAVDVHGSY 340

Query: 423 GYIEERSIARHYRES 437
           G + + +I R YR++
Sbjct: 341 GLMRDYTIERVYRDA 355


>gi|156328606|ref|XP_001618960.1| hypothetical protein NEMVEDRAFT_v1g7919 [Nematostella vectensis]
 gi|156201078|gb|EDO26860.1| predicted protein [Nematostella vectensis]
          Length = 72

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++K    KMA +VI +A++ +GG GY+EE  +AR  R+S    I  G G + +L
Sbjct: 11  ASMSKLLSTKMADSVIYDALQLLGGYGYMEEYPLARLLRDSRLGPI--GGGTSEIL 64


>gi|310790443|gb|EFQ25976.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 431

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LG TE  GG+D+A + +   K  DG  Y ++GHK +++  +    +  A   G  G   +
Sbjct: 164 LGCTEPTGGSDLANLRTTAIKSEDGSHYVVTGHKKWITGALRATHMTTAVRTGGSGAGGI 223

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-VEL------------EFSNTFGFLLGDLNVS 305
             L+      G+  +R+ N   N  ++T V L            + ++ F +++ + N  
Sbjct: 224 SVLVIPLDLPGVSRRRITNSGWNAGDSTWVALDDVKVPADHLIGQENSGFRYIMTNFNRE 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                      ++ + +M+  G R+ L +A  YA  RH  G  L+   +++  +  +A  
Sbjct: 284 R----------FILAVLMNGQG-RICLEDAWAYAMDRHTFGEPLMAHQIIRHKLVSMARY 332

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + +  A   ++A       S   E A +RI   + K    ++      EA +  GG+GY
Sbjct: 333 VESHWAWLQQIAYHAQVTGSMGTELA-SRIA--LAKVHGGRLLELANREAQQIFGGAGY 388


>gi|168038304|ref|XP_001771641.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677080|gb|EDQ63555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 483

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 24/241 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++ +  +K+  G + L+G K W  ++  +D  ++ A+     ++  F+V
Sbjct: 206 LTEPGYGSDASSLNTTAKKVEGG-WLLNGQKRWIGNATFADVAVLFARNTQTNQINGFIV 264

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +    G+P G    +++NKIG R     ++   N F      L       +  K+L   
Sbjct: 265 KK----GTP-GYRATKIENKIGLRMVQNGDIVMENAFVPDKDRLPGINSFADTNKVLAV- 318

Query: 319 DSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            S IM V+   + +A  ++     Y   R   G  L    + +  +  +  +I A   L 
Sbjct: 319 -SRIM-VAWQPIGIAMGVYDICHRYLLERKQFGAPLAALQINQEKLVRMLGNIQAMFLLG 376

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL   ++  K    +A+       + K W  K A   +A   E +GG+G + +  +A+ 
Sbjct: 377 WRLCKIYEAGKMTPGQAS-------LCKAWNTKRARETVALGRELLGGNGILADFLVAKA 429

Query: 434 Y 434
           +
Sbjct: 430 F 430


>gi|156972244|gb|ABU98950.1| acyl-CoA oxidase [Glycine max]
          Length = 400

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 20/238 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +A+ +   K+  G + L G K W  +S  +D  ++ A+     ++  F++
Sbjct: 174 LTEPDYGSDASALKTTATKVEGG-WILEGQKRWIGNSTFADVLVVFARNASTNQINGFII 232

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +        GL   +++NKIG R     ++     F     D        +D   ++ +
Sbjct: 233 KK-----DAPGLTVTKIENKIGLRIVQNGDIVMRKVF-VPDEDRIAGVNSFQDTNKVLAV 286

Query: 319 DSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              +++    G+ + + +  H Y + R   G  L    + ++ +  +  +I A   + +R
Sbjct: 287 SRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWR 346

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           L   ++  K    +A+       + K W    A    A   E +GG+G + +  + RH
Sbjct: 347 LCKLYESGKMTPGQAS-------LGKSWITLRARETAALGRELLGGNGILADFLVRRH 397


>gi|169859366|ref|XP_001836323.1| acyl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
 gi|116502612|gb|EAU85507.1| acyl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
          Length = 519

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 51/266 (19%), Positives = 109/266 (40%), Gaps = 26/266 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCL--SGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L ++E + G+D+  + +  +K  DG + +     KW  +   +D F +  + +     
Sbjct: 249 ICLAISEAQAGSDVMGLQTTARKTEDGQHWIINGTKKWITNGTFADYFTVGCRTDDGFTV 308

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNA------TVELEFSNTFGFLLGDLNVSTGPV 309
            LV R        G+  +++K    + +         V++   NT G   G + V     
Sbjct: 309 ILVER------GEGVETKQIKTSYSSTAGTAFITFDNVKVPVGNTLGEEGGGIFVILSNF 362

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              + ++   SA       R  + E + +  +R V G  L  Q V++  +A +   I+ A
Sbjct: 363 NHERWVMCCASA----RSQRTIVEECLQWTNQRKVFGKPLHSQAVIRSKLAAM---ISRA 415

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEE 427
            +    L N   +  + S +   +++  PI   K +  +       +A++  GG G  + 
Sbjct: 416 ESAQSWLENITYQMNNMSYKQQASKLAGPIALLKSYSTRAGQETARDAVQVFGGRGITKT 475

Query: 428 ---RSIARHYRESPANSILLGSGNAM 450
              + I  ++R  P +++L G+ + +
Sbjct: 476 GMGKFIEHYHRTVPFDALLGGAEDVL 501


>gi|326382442|ref|ZP_08204133.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198561|gb|EGD55744.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 379

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 125/276 (45%), Gaps = 37/276 (13%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG- 254
           ++ + ++E   G+D+ A+T + +K+ DG + ++G K W  ++  S + +++A+ +   G 
Sbjct: 120 SLSVSMSEPEAGSDVGALTCRAEKV-DGGWKINGQKTWCSNAHFSKSILLIARTDRSGGK 178

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                 F VP     G+P GL    +    G   N   +L F++ F   + D  V  G V
Sbjct: 179 HEGLTQFHVPA----GTP-GLKISGIDTLGGREVN---DLYFTDCF---VPDSAV-VGTV 226

Query: 310 ED--MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362
            D   +++  L+S  + ++ M++ LA     + + + + R   G  +     ++  +AD 
Sbjct: 227 GDGWRQLMSGLNSERLILAAMQLGLARRSFDDTLAFIKDRKQFGRPIGSFQALRHRMADH 286

Query: 363 ALDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A +IA    L + +A + D    K    EA+  ++ A  T       +  +  + M+ +G
Sbjct: 287 ATEIACTRELVYSVARAADAHPEKMMPREASMVKLKATET-------SKKMTIDGMQMMG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY  E    R  R S   S + G  N +  D++ 
Sbjct: 340 GYGYATEFDAERLMR-SAIISTVFGGTNEIQRDIIG 374


>gi|327310837|ref|YP_004337734.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326947316|gb|AEA12422.1| Acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 405

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 26/263 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           + K    IG+G TE +GG+D+A+  ++  +   G++ L G K  ++   +   + L    
Sbjct: 115 VAKGRAFIGIGSTEPQGGSDVASFQTKAVR-DGGVWRLYGEKNMVTGVTT--VLNLPYGG 171

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--FGFLLGDLNVSTGP 308
           G V      RL ED       +  L  + G R+      ++      G   G L +   P
Sbjct: 172 GLVAITRTGRL-EDKHRGITVFLALLKRRGQRAEGFEHRDWEEIGRHGLPTGYLRLEGLP 230

Query: 309 VEDMKILIYLDSAI----------------MSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           VED  +L  L+                    SV   R  L   + + R+R V G  +   
Sbjct: 231 VEDRFMLGELNGGFKIAMEGFDLARTIIGAASVGAARWLLDRGLEWIRQRAVFGKPIASY 290

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA---PITKYWCCKMAP 409
             +    A++   + AA    ++ A   D    R + A   + +A    + KY    +A 
Sbjct: 291 QAVSFKFAELYARLEAARLAVYKAAWIADRI-YRGDSAFSIKDIATAGAVAKYLAVSLAV 349

Query: 410 AVIAEAMECIGGSGYIEERSIAR 432
               E M+  GG+ Y +E ++AR
Sbjct: 350 ETALEVMKWFGGASYFKETNVAR 372


>gi|239940217|ref|ZP_04692154.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986706|ref|ZP_04707370.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443648|ref|ZP_06583038.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346595|gb|EFE73499.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 406

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 28/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P       IG  GLTE   G+D A + +  ++  +  + L+G K W  +
Sbjct: 124 FGSEEQKQRWLPGMAAGEIIGCFGLTEPDHGSDPAGMRTYAKRDGED-WILTGRKMWITN 182

Query: 237 SPMSDAFIMLAQV-EGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-- 289
             ++   ++ AQ  EG  G     F+VP         G     + +K   R++ T EL  
Sbjct: 183 GSVAGVAVVWAQTDEGEDGRGIRGFVVPT-----DAPGFSAPEIHHKWSLRASVTSELVM 237

Query: 290 -EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSG 346
            E       +L D     GP   +  L +    I+  S+   R S   A+ YAR R   G
Sbjct: 238 DEVRLPADAVLPDAKGLRGP---LSCLSHARYGIVWGSMGAARASFESALDYARSREQFG 294

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    + +  +AD+AL++     L+  L    D    R E+ ++ ++         C+
Sbjct: 295 RPIGGFQLTQAKLADMALELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICR 354

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +       +G +G   E  + RH
Sbjct: 355 TSRTI-------LGANGISLEYPVMRH 374


>gi|87198307|ref|YP_495564.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133988|gb|ABD24730.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 433

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 38/262 (14%)

Query: 200 LGLTEKRGGTDIAAITSQG-QKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG- 254
            GLTE R G+D   + ++   +  DG+  + + G K W     ++      A+  G  G 
Sbjct: 152 FGLTEPRHGSDATHMETRAVPETRDGVPGWRIDGEKMWTTGMHVATHCATFARTSGADGD 211

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDL 302
                CFLVP   E     GL  +       N       + F+N +       G + G L
Sbjct: 212 ARGITCFLVPNPTE-----GLVIEEYLWTF-NMPTDHPRVSFTNVWVPDSAILGPVGGGL 265

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++   V   +I      A  S+      + E++ YAR R   G  L     ++  + ++
Sbjct: 266 AIAQSFVHQNRIR----QAASSLGAATFCVEESVRYARERKPFGEELARNQAIQFPLVEL 321

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVIAEAM 416
           A        L  + A  +D  +  +EE  + RI   ++       YW  ++       AM
Sbjct: 322 ATQCEMLRLLIRKTA--WDMDRLEAEEGGHKRIERELSDKVSMCNYWANRLVCEAADRAM 379

Query: 417 ECIGGSGYIEERS---IARHYR 435
           +  GG GY   +    I RH+R
Sbjct: 380 QVHGGIGYSRHKPFEHIYRHHR 401


>gi|330465858|ref|YP_004403601.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328808829|gb|AEB43001.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/252 (20%), Positives = 109/252 (43%), Gaps = 17/252 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A++T++  +  D  + L+G K W  ++ +S+ + + A  +       +  
Sbjct: 131 LSEPEAGSDAASMTTRAVRDGDH-WVLNGVKRWITNAGVSEFYTVFAVTDPAARSRGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + + S  G+ +   + K+G + + T E+   N    +  D  +          +  LD 
Sbjct: 190 FVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEGTGFATAMQTLDH 247

Query: 321 AIMSVSGMRVSLAE-AIHYAR----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++++   V +A+ A+ YA+     R   G  + +   ++  +AD+ + + AA  L++ 
Sbjct: 248 TRVTIAAQAVGIAQGALDYAKGYVAERKQFGKAVAEFQGVQFMLADMGMKLEAARQLTY- 306

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  A  RSE   A         K +    A  +  +A++ +GG GY  +  + R  
Sbjct: 307 ------AAAGRSERGDADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMM 360

Query: 435 RESPANSILLGS 446
           R++    I  G+
Sbjct: 361 RDAKITQIYEGT 372


>gi|324998334|ref|ZP_08119446.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 381

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 27/257 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------ 254
           ++E   G+D+  +  +  K  +G + + G K W  ++ ++   +++A+     G      
Sbjct: 126 MSEPEAGSDVGGLKCRATKTENG-WRIDGQKTWCSNAHIASHILLVARTSTEGGKHDGLT 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+VP         GL    +    G   N   +L F      L  D  V        ++
Sbjct: 185 MFVVP-----AGAAGLSVHGIDTMGGKEVN---DLYFDGCE--LPADAVVGAEGQGWKQL 234

Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  L+   M ++G+ + LA     + + Y + R   G  +     ++  IAD A ++AA 
Sbjct: 235 MAGLNLERMILAGLMLGLARRAFDDTVAYVKERKQFGRPVGSFQALRHRIADNATELAAT 294

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L    A + DEA    E  A     A + K    ++A  +  E M+ +GG GY  E  
Sbjct: 295 KLLVHDTARTIDEA----EPGALFPREASMAKLKATELAKHLSLEGMQMLGGYGYATEYG 350

Query: 430 IARHYRESPANSILLGS 446
           + R  R+S  +++  G+
Sbjct: 351 MERLLRQSVVSTVYGGT 367


>gi|324997768|ref|ZP_08118880.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 11/200 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D A++T++ +   DG       +W   + ++D  ++ A+    +  F VP
Sbjct: 133 FGLTEPGSGSDPASMTTRAEPDGDGWVLHGAKRWIGLATIADVAVVWARTPDGIRGFCVP 192

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD--LNVSTGPVEDMKILIY 317
                   +G     ++ K+G R++   ++        L GD  L  +TG       L  
Sbjct: 193 T-----GTDGFTATPIEPKLGLRTSVQADVVLDGV--RLPGDAVLPGATGLRGPFTCLNE 245

Query: 318 LDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               IM  ++   R +   A  Y   R   G  L    + ++ + D AL++     ++ R
Sbjct: 246 ARYGIMWGAMGAARDAWTTAWRYTLERRQFGTPLAAFQLTQQKLVDTALELQKGMLVALR 305

Query: 376 LANSFDEAKSRSEEAAYARI 395
                D  + R E+ +  ++
Sbjct: 306 TGRLKDAGRLRPEQISVGKL 325


>gi|284043620|ref|YP_003393960.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947841|gb|ADB50585.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 391

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 42/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           LTE   G+D+AA++ + ++  DG + L+G K W  ++P +D + + A+     G      
Sbjct: 132 LTEPDAGSDVAALSLRAERDGDG-FRLTGEKTWISNAPEADVYSVFARTTDGAGARGLTA 190

Query: 256 FLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           FLVPR  E     GL  + L+    + IG  +   V +   +  G + G   V+      
Sbjct: 191 FLVPRESE-----GLSGEPLRLLSPHPIGRLTFDGVYVPPEHLLGEVDGGFRVA------ 239

Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYARR-RHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L     ++ + + GM  +  +A       R   GG L D   +   +AD++  + AA
Sbjct: 240 MRTLDMFRPSVGAFAIGMANAALDAAVAHASTRQAFGGPLKDLQAVAHRLADVSARVHAA 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK--MAPAVIAEAMEC---IGGSGY 424
                RLA            AAY R + P+T+       +A  V  EA++    + G+  
Sbjct: 300 -----RLA-------VHHAAAAYDRGVRPVTQASAIAKLLATEVAQEAVDAAIQVHGARA 347

Query: 425 IEERSIARH-YRESPANSILLGS 446
           +E   +  H YRE  A  I  G+
Sbjct: 348 LEHGHLLEHLYREVRAPRIYEGA 370


>gi|311744507|ref|ZP_07718307.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312126|gb|EFQ82043.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 623

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 62/318 (19%), Positives = 135/318 (42%), Gaps = 58/318 (18%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E D T    M +      + LTE   G+D+ A  ++     DG + + G K F++S   D
Sbjct: 144 ERDRTIAGHMIEKQWGATMVLTEPDAGSDVGAGRTKAFPNEDGSWNIEGVKRFITSAEHD 203

Query: 242 A-----FIMLAQVEGR----------VGCFLVPRLLED-------GSPNGLCYQRLKNKI 279
                  ++LA+  G           +  FLVP++  D       G  NG     ++ K+
Sbjct: 204 MSENIMHLVLARPVGVEGVGGPGTKGLSLFLVPKIHFDHETGELTGERNGAYVTNVEKKM 263

Query: 280 GNRSNATVELEFSNTF------GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           G + + T E+ F +T       G+LLG+    +N     +E+ ++ +       +++ + 
Sbjct: 264 GIKVSTTCEVTFGDTNLGGPARGWLLGEVHDGINQMFRVIENARMFV----GAKAIATLS 319

Query: 330 VSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRL 376
                A+ +A+ R V G  L                P ++R++           +L    
Sbjct: 320 TGYLNALEFAKER-VQGADLTQAADKTAPRVTITHHPDVRRSLLTQKAFAEGLRSLMLYT 378

Query: 377 ANSFDEAKSRS---EEAAYAR----IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEER 428
           A   D+   ++   E+A+ +     ++ P+ K +  + +  ++  E+++  GGSG++++ 
Sbjct: 379 ATWQDDVMIKTAAGEDASLSEAINDLLLPLVKGYGSERSWVLLGTESLQTFGGSGFLQDY 438

Query: 429 SIARHYRESPANSILLGS 446
            + ++ R++  +++  G+
Sbjct: 439 PVEQYVRDAKIDTLYEGT 456


>gi|113018|sp|P08503|ACADM_RAT RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|202689|gb|AAA40670.1| acyl-CoA dehydrogenase medium subunit (EC 1.3.99.3) [Rattus
           norvegicus]
          Length = 421

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 23/256 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC--F 256
           +TE   G+D+A I ++ +K  D  Y ++G K W  +   ++ + +L +   + +V     
Sbjct: 160 VTEPSAGSDVAGIKTKAEKKGDE-YVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
               ++E  +P G+   + +  +G R + T  + F +     +   NV  G     KI +
Sbjct: 219 FTGFIVEADTP-GIHIGKKELNMGQRCSDTRGITFEDV---RVPKENVLIGEGAGFKIAM 274

Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              D    +V+   V LA     EA  YA  R   G +L++   +   +A++A+ +  A 
Sbjct: 275 GAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELAR 334

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               R A   D  +  +         A I K +   +A  +  +A++  GG G+  E  +
Sbjct: 335 LSYQRAAWEVDSGRRNT-------YFASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPV 387

Query: 431 ARHYRESPANSILLGS 446
            +  R++    I  G+
Sbjct: 388 EKLMRDAKIYQIYEGT 403


>gi|284041669|ref|YP_003392009.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283945890|gb|ADB48634.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 431

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 20/232 (8%)

Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKN 277
           +I    Y LSG K F+  +  ++  ++ A++ G   G FLV     DG        +   
Sbjct: 212 RIDGADYVLSGVKSFVPRATEAELLVVAARIAGHGPGLFLV-ETKSDG-----VLAKAAP 265

Query: 278 KIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G R+ A  E+   E       LLGD + +     D      L    +++   +  L  
Sbjct: 266 GMGVRAAAVGEVLLEEVRVPARALLGDGSPAV--YADAVRRARLAWCALAIGTGKAVLDY 323

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y   R   G  +  +  +  A+++IA+++      + R A+  D  K  + E A AR
Sbjct: 324 VIPYVNERVAFGEPISHRQSVAFAVSNIAIELEGMRLATLRAASRADMEKEFAREVALAR 383

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  + C +    + +E ++ +GG GYI+E  + R YR+  A  ++ G+
Sbjct: 384 -------HLCSEKGAWIGSEGVQLLGGHGYIKEHPVERWYRDLRAVGVVEGA 428


>gi|84501873|ref|ZP_01000031.1| cyclohexanecarboxyl-CoA dehydrogenase [Oceanicola batsensis
           HTCC2597]
 gi|84389868|gb|EAQ02502.1| cyclohexanecarboxyl-CoA dehydrogenase [Oceanicola batsensis
           HTCC2597]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 64/311 (20%), Positives = 125/311 (40%), Gaps = 37/311 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
             MVA      +  +W PK+ S +               IGLGLTE RGG+D A +  + 
Sbjct: 94  GGMVAKHACRDIAAEWVPKVVSGD-------------AVIGLGLTEPRGGSDAANLILKA 140

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLK 276
           +K  +G + L+G K  +S +  +DA ++ A+      G   V     D + +G+      
Sbjct: 141 EKSGNG-WRLNGEKTSMSFASQADAAVVFARTGNPDGGSRGVSAFFVDLNQDGIKRTHF- 198

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMR 329
           + IG +      + F + F     L+ + + + G +    +  + LI L+     +   +
Sbjct: 199 DDIGTKPVGRGSVFFDDVFVPAENLMAEQDRAFGTIMAGFDYSRALIGLE----CLGAAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            S+ E   Y + R   G  ++    +   +A+    +     L +   +  D     + +
Sbjct: 255 ASVDETWAYVQEREAFGAPIVQYQGVSFPLAEAETQLTMMRQLCYYTLDLRDRGMPHTSQ 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA       + K++  K A  ++ + +   G  GY  +  +  H R +    + +G G A
Sbjct: 315 AA-------MCKWYLPKTACEILHQCLILHGHYGYTTD--LPHHQRYNDVLGLQIGDGTA 365

Query: 450 MVLDVLNLLEK 460
            +  ++   EK
Sbjct: 366 QIQKLVIAREK 376


>gi|149914805|ref|ZP_01903335.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
 gi|149811598|gb|EDM71433.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 91/247 (36%), Gaps = 29/247 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCF 256
           LTE   GTD AAI+++  +  DG        W ++   +   ++ AQ       G +G F
Sbjct: 118 LTEPGTGTDFAAISTRAAETEDGWRITGEKTWIVNGRHAGLAVVFAQCGTVGDAGSIGGF 177

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRS------NATVELEFSNTFGFLLGDLNVSTGPVE 310
           LV         + L     +  +G  S       A   L     F  +L ++N +     
Sbjct: 178 LVDLAQPGARRSALTSGFAQGSMGTGSFTLTDAQAQPLLPPGTAFKSILTEINAAR---- 233

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                 Y+  A M  + +  ++AEA  Y   R   G  L  Q   ++ +     D+AA+ 
Sbjct: 234 -----TYV--AAMCNAMLGAAIAEAADYGAERQSFGKPLNQQAAWRQPLGSAQTDLAASQ 286

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+ R        +     AA A+I A        + A   I   +  +G +G +     
Sbjct: 287 ALTSRAVALIATGQDAQLTAAQAKIAA-------TEAAQRHIPAMLHAMGAAGLLPHYPF 339

Query: 431 ARHYRES 437
            RH   S
Sbjct: 340 TRHLAAS 346


>gi|316305708|gb|ADU56353.1| acyl-CoA dehydrogenase [Streptomyces sp. ATCC 55098]
          Length = 386

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 38/269 (14%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEGRVGCFLV 258
           +E   G+++A I++  ++  + +  L G K F +S     F+++    A   G+     V
Sbjct: 119 SEHEAGSELAKISTMVRRDGESL-VLDGTKAFSTSTDFAQFLVVITRSADDPGQYLAVTV 177

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------------SNTFGFLLGDLNVST 306
           PR        GL   +  + IG R++AT ++ F             N    L   LN S 
Sbjct: 178 PR-----DTPGLRVDKRWDVIGLRASATYQVSFVDCRVPSDHALNGNGLRLLEIGLNAS- 231

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                 +ILI    A  ++   R      + YAR + + G  L+   V    +    + I
Sbjct: 232 ------RILI----AATALGVARRIRDLCMEYARTKSLRGAPLVKDAVFVGRLGQFEMQI 281

Query: 367 AAATALSFRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                     A ++D   +R + A       A+  A   K +C + A  + + A E  GG
Sbjct: 282 EVMATQCLAAARTYDATAARPDAARTLLRQGAQKSALAAKMFCGQTAWQIASAASEMFGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY  E  I +  R+    SI+ G  + +
Sbjct: 342 LGYTHEMPIGKLLRDVRHASIIEGGDDVL 370


>gi|254821119|ref|ZP_05226120.1| FadE24 [Mycobacterium intracellulare ATCC 13950]
          Length = 465

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++G+   F+V     + S  GL   +    +G R+ 
Sbjct: 251 YRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESSAKGLTV-KADPSMGLRAA 304

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A   +E S      G  LG+ + S     +   L  L  A ++V      L   + Y + 
Sbjct: 305 ALGHVELSGVSVPLGARLGEDDASDQDYSEAIALSRLGWAALTVGTSHAVLDYVVPYVKE 364

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A   ++      EAA A+ +     
Sbjct: 365 REAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGAARAEQGLPFIREAALAKRLG---- 420

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG GY +E  + R YR+
Sbjct: 421 ---ADKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 452


>gi|94313335|ref|YP_586544.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357187|gb|ABF11275.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Cupriavidus metallidurans CH34]
          Length = 410

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 25/248 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------- 250
            GL+E   G+D+  + ++  +  D  + L+G K W  ++P +D  ++ A  +        
Sbjct: 146 FGLSEPDAGSDVFGMRTRATRDGDH-WVLNGTKQWITNAPYADYAMVFAVTDEEKARAHK 204

Query: 251 -GRVGCFLVPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G  G FL  R      P+ +     L   IG  S   V +  ++  G +   L+V+   
Sbjct: 205 GGITGFFLPTRTPGFSVPSVIPTMGHLGADIGIISLENVRVPDTHRLGPVDRGLSVALDG 264

Query: 309 VEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           V   ++     S   S  G+   +L +A+ YA+ R   G  + D   ++  +A+ A+DI 
Sbjct: 265 VNAGRL-----SMAASCLGLAEWALEQAVAYAKVRKTFGQPIGDHQAVQIMLAECAMDIY 319

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  ++    A   D     ++E +       I K    +MA  V   AM+  GG G   E
Sbjct: 320 ATKSMVRHCAWLVDNDLPATKEVS-------IIKASSTEMAGRVFDRAMQIHGGMGLTNE 372

Query: 428 RSIARHYR 435
             +   YR
Sbjct: 373 LRLEAGYR 380


>gi|126641687|ref|YP_001084671.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 358

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 89  MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 147

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 148 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 182


>gi|156742829|ref|YP_001432958.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234157|gb|ABU58940.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 557

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 25/265 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGI---YCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           +  G TE + G+D+A +T++   +  DG    Y +SG K W  +  ++  + +LA   G 
Sbjct: 136 VAYGATEPQAGSDLATLTTKAVPVVEDGKVIGYKISGRKQWISNGGVAKIYTILANAPGG 195

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F+V    E  +P G    + ++K G R++ T  L     F     L+G +    G  
Sbjct: 196 ISWFIV----EHDAP-GFTKGKPEDKHGIRASNTAALFLDEVFVPADRLVGGVE-GKGLA 249

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVM--KRAIADIALD 365
           +   +  Y    + S  +     ++  AI YA+ R   G  L  Q  +  K  + ++A  
Sbjct: 250 QAAAVFGYTRLMVGSFGLGAGWEAMRRAIRYAQTRIQGGKPLSQQQGLTHKLIVPNVARL 309

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA   + + +A + D    + +          + KY   +       +A++  GG GY 
Sbjct: 310 EAARHYIEW-VAETIDGGNDQQQ------TEGAVAKYMATEAGNKAAEDAIQVHGGYGYT 362

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
           +E  + +  R+     I  G+   M
Sbjct: 363 KEYMVEKIKRDVRITCIYEGTSEIM 387


>gi|86360171|ref|YP_472060.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284273|gb|ABC93333.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 386

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 30/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ---------V 249
           L +TE   G+D+  +    ++ S G + L G K F+S + ++D  I+ A          +
Sbjct: 122 LAITEPGAGSDMRGMKCAARR-SGGDFVLDGTKHFISHADVADFVIVFAATGEEETPKGI 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLK--NKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           + ++  FLV R    G+P    ++ LK  + + +R      L F++       +LG+++ 
Sbjct: 181 KKKITAFLVDR----GTPG---FEILKGYDSVSHRGYHNCTLSFTDCRIPEAQVLGEVHR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L  A   V   R     A+ YA  R   G  +     +   +AD+  
Sbjct: 234 GFDIANRWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGRPIGANQGVSFKLADMIT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA  L+   A   D   +   + A A++ A        +M   V  EA++  GG G 
Sbjct: 294 EIDAADWLTLAAAWQVDAGLAADRQIASAKLYA-------SEMLARVTDEAIQIYGGMGL 346

Query: 425 IEERSIARHYRESPANSILLGS 446
           +++  +AR +R++    I  G+
Sbjct: 347 MDDLPLARFWRDARVERIWDGT 368


>gi|262278970|ref|ZP_06056755.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259321|gb|EEY78054.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 401

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDKKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISF 223


>gi|205352110|ref|YP_002225911.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205271891|emb|CAR36731.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
          Length = 387

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 110/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAVKREDR-YVINGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+LA+           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLARTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|297204608|ref|ZP_06922005.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
 gi|197710676|gb|EDY54710.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 385

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 26/256 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR----VG 254
           L LTE     D A +    ++ S+G + L+GHK F L    +D  + +A++E      +G
Sbjct: 124 LALTEDSARWDAAGVRLTARE-SNGSWLLTGHKTFVLDGATADVVLTVARIENATDDGIG 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F V     +G   GL    L      R  A   L++ +     L     + G   D+ +
Sbjct: 183 VFCV-----EGDAPGLTRAPLPTMDPTRRQA--RLDYQDVPATRL----RTHGDGWDL-V 230

Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD A ++++  +V +A      A+ YA+ RH  G  +     +K  +AD+ L++ +A
Sbjct: 231 SEVLDRAAVALAAEQVGVASRALDMAVEYAKVRHQFGRPIGSFQAVKHLLADVLLEVESA 290

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A +     + + ++S   E      +A + K +C         E ++  GG G+  E  
Sbjct: 291 RAAAHYALLAAENSESADPELP---AVASLAKAFCSDACVRATEENIQVHGGIGFTWEHP 347

Query: 430 IARHYRESPANSILLG 445
              + + +  + +L G
Sbjct: 348 AHLYLKRAKTSQLLFG 363


>gi|107100337|ref|ZP_01364255.1| hypothetical protein PaerPA_01001362 [Pseudomonas aeruginosa PACS2]
          Length = 386

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +    GL  Q 
Sbjct: 146 YVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEG-MSIFLVD--LREAIGKGLTVQP 202

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 203 IANMVNHETN---ELFFDNLEIPADSLIGEEGKGFRYILDGLNAE-------RTLI---- 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +
Sbjct: 249 AAECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACQEY 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 309 DAGLN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 358


>gi|54026802|ref|YP_121044.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018310|dbj|BAD59680.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 393

 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 25/266 (9%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P      A+G  GLTE   G++   + ++   + DG  + L+G K W  
Sbjct: 110 FGSEEQKQRWLPSMAAGEALGCFGLTEPDFGSNPGGMRTR--AVRDGSDWVLNGSKMWIT 167

Query: 236 SSPMSDAFIMLA-QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +  ++D  ++ A  VEG      V  FLVP         G   + ++ K+  R++ T EL
Sbjct: 168 NGSVADVAVVWAYAVEGGDAKPVVRGFLVPT-----DTPGFTAREMRRKLSLRASITAEL 222

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGG 347
           +           L  S G    +  L      I+  ++      LA  I YAR R V   
Sbjct: 223 DLDEVRLPADAVLPGSNGLAAPLACLSEARFGIVFGALGAAADCLAATIDYARSREVFDK 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    + +  IAD+AL+      L+  L  + D  +  +E+ +  ++ +        + 
Sbjct: 283 PLAAYQLTQAKIADMALEYGKGMLLALHLGRAKDAGRITAEQISAGKLNS-------TRT 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A A+  E    +G +G   +  + RH
Sbjct: 336 AIAIARECRTVLGANGITLDYPVLRH 361


>gi|159036696|ref|YP_001535949.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915531|gb|ABV96958.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 405

 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 16/282 (5%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           R Y P    PM K  +     ++EK  G+++AA+    ++ +   Y L G K W   + +
Sbjct: 121 RRYLP----PMAKGLLVGAFAVSEKEAGSEVAAVGLSARR-NGADYVLDGTKAWIAHATI 175

Query: 240 SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGF 297
           +D F+++A+  EG     L   ++   SP G+  + L + I  RS   + LE        
Sbjct: 176 ADLFVVVARTGEGPGPLGLTAFVVPADSP-GVRVEPL-DAIAPRSFGHLVLEHCRVPTEA 233

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG          D+     +  A  ++   R +   A+ + R R   G  L D  ++K 
Sbjct: 234 VLGRPGKGFIIALDLLERFRMTVAAAAIGFARRAADAALAHTRSRRAFGSTLFDLQLVKA 293

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           ++AD+ + + AAT L+ R A   D    R     +AR  + I K +  + A   +  A++
Sbjct: 294 SLADMEVRLHAATLLTARAAWECDRGSRR-----FAR-YSNIAKVYATEAAQETVDAAVQ 347

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             G +G I +    R YR+  +  I  GS + + L V + L+
Sbjct: 348 LFGAAGVIRDGVPERLYRQIRSLRIYEGSTDVLRLAVADALD 389


>gi|209515559|ref|ZP_03264424.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504026|gb|EEA04017.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 388

 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 95/244 (38%), Gaps = 57/244 (23%)

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQV---------EGRVGCFLVPRLLEDGSPNGLCY 272
           DG Y ++G K W      SD  I+LA+             + CFLV   L     NGL  
Sbjct: 145 DGRYVVNGQKVWISRVQHSDMMILLARTTPLSDVKKKSDGLSCFLVD--LHQAIGNGLTV 202

Query: 273 QRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYL 318
           + + N + + +N   EL F N               F ++L  LN     +         
Sbjct: 203 RPIPNMVNHETN---ELFFDNLEIPEENLIGEEGKGFKYILDGLNAERALI--------- 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALS 373
             A   +      +  A  YA  R     I+ D+P+     ++  IA+  +D+ AA  + 
Sbjct: 251 --AAECIGDGYWFVDRASKYASER-----IVFDRPIGMNQGIQFPIAESYIDVRAADLMR 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++    FD  +    EA  A+ +A  T  W  K A A     ++  GG G+  E  + R 
Sbjct: 304 YKACELFDNHQPCGAEANMAKHLAA-TASW--KAANA----CLQTHGGFGFACEYDVERK 356

Query: 434 YRES 437
           +RE+
Sbjct: 357 FRET 360


>gi|317401765|gb|EFV82382.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 408

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 33/265 (12%)

Query: 215 TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           T QG K     + + G KWF++ +  +  FI++A+        L   L +   P     +
Sbjct: 152 TRQGDK-----WLIHGRKWFITGAGAAQHFILIARTSDDARKGLSAFLFDADQPGWRIVR 206

Query: 274 RLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           R+            ELEF              G  L    +  GP      + +L  A  
Sbjct: 207 RIPIMGPEEHGGHCELEFDGLEIPDENRLMEVGDGLKLTQIRLGPARLTHCMRWLGLA-- 264

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R ++A A+ Y   R   G  L D+  ++  + D A+ I     L+ R A   D+ 
Sbjct: 265 -----RRAMAVAVDYVGERSSFGQKLADREGVQWLLGDAAMQIEIGRLLTMRAAARLDQG 319

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E + A+I+   T +        V+  A++  G  GY ++  +   YR +    ++
Sbjct: 320 DFARKEISMAKIVVSETLH-------KVVDTALQLNGARGYSKDTPLEWIYRYARQARLV 372

Query: 444 LGSG--NAMVLDVLNLLEKGTNLFE 466
            G+   + MVL    L+++G   ++
Sbjct: 373 DGASEVHKMVL-ARYLMDQGDAFWQ 396


>gi|313888790|ref|ZP_07822451.1| acyl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845159|gb|EFR32559.1| acyl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 47/286 (16%)

Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG 254
           GLG   LTE   G+D +A T+   +  D  Y L+G K F+++  ++  + + A  +   G
Sbjct: 117 GLGAFCLTEPGAGSDASAGTTTAVRDGDE-YVLNGRKCFITNGAVASYYCITAATDKSQG 175

Query: 255 C-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                 FLVP     G+P GL   + ++K+G R+        SNT   +L D  +   P 
Sbjct: 176 VRGLSMFLVPA----GTP-GLSAGKEEDKMGIRT--------SNTTDVVLEDCRI---PA 219

Query: 310 EDMK---------ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           +++           +  LD A   +  + V +A     EA  Y   R   G  +     +
Sbjct: 220 KNLIGQEGQGFSIAMKTLDQARAWMGCIAVGIAQRGINEAKRYTTERIQFGKQINKNQAI 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ +    A  +        D   + + E+A       I K +   +A  V  +A
Sbjct: 280 QFKLADMDIQTEVARQMVANALTRMDMGLTYNRESA-------IAKCFASDIAMKVAEDA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  GG GY  E  + +  R++    I  G+   + + V N L +G
Sbjct: 333 IQLFGGYGYSREYPVEKLLRDAKIFQIFEGTNEVLRIVVANNLLRG 378


>gi|90416918|ref|ZP_01224847.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
 gi|90331265|gb|EAS46509.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
          Length = 380

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 44/273 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254
           + +TE   G+D+     QG K +   DG  + L+G K F+++   S   I++A+     G
Sbjct: 124 IAMTEPSAGSDL-----QGTKTTAVLDGDEWVLNGSKTFITNGQKSGLVIVVAKTNVDAG 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300
              +   L +    G    +   K+G ++  T EL F +               F +L+ 
Sbjct: 179 SKGISLFLVEADTPGFTKGKNLEKLGLKAQDTSELFFQDVRIPKDNLLGEEGRGFIYLMQ 238

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           DL     P E + + +       S +GM +  +   I Y + R   G  +      +  +
Sbjct: 239 DL-----PQERLSVAV-------SANGMCQAVMQTTIDYVKERKAFGTNVASFQNTQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+++ +++ A     R      E K  +  A+  +++    +   CK+A     E ++  
Sbjct: 287 AELSAEVSCAEVYLDRCTELLIEDKLDTVTASKLKLLTTDLQ---CKVAD----ECLQLF 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           GG GY+ E  + R + ++    I  GS   M L
Sbjct: 340 GGWGYMWEYPVCRAFADARVQRIYAGSNEIMKL 372


>gi|198414023|ref|XP_002124098.1| PREDICTED: similar to acyl-CoA dehydrogenase-like, partial [Ciona
           intestinalis]
          Length = 248

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/190 (19%), Positives = 86/190 (45%), Gaps = 18/190 (9%)

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+   R  +KIG  S+ TV++   +      F++G+     G     ++L + +  + + 
Sbjct: 56  GVTVARKIDKIGMHSSDTVQVFLEDVRVPKSFMIGE----EGRGFTYQMLQFQEERMFAA 111

Query: 326 SG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +     +  ++ E I Y ++R + G  ++D  V+   +A++  ++ A  ++ +R    + 
Sbjct: 112 AAALKPLETAINETIAYTKQRKIFGRTILDNQVVHFRLAELQTEVEALRSMLYRTVGLYL 171

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    +        +A + K    ++A       ++  GG G+ +E  I+R+YR+    S
Sbjct: 172 KGHDVTN-------LASMCKLKTGRLARETTDACLQYWGGMGFTKESIISRYYRDFRLVS 224

Query: 442 ILLGSGNAMV 451
           I  G+   M+
Sbjct: 225 IGGGADEVML 234


>gi|20146194|dbj|BAB88984.1| acyl-CoA dehydrogenase [Bacillus cereus]
          Length = 162

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 16/162 (9%)

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++  ++D +++ A  +           + +    G    + ++K+G RS+
Sbjct: 3   YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSS 62

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----A 335
            T E+ F +       LLG+        +  K+ +  LD     ++   V +A+     +
Sbjct: 63  PTTEIMFEDCRIPVENLLGEEG------QGFKVAMQTLDGGRNGIAAQAVGIAQGALDAS 116

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A
Sbjct: 117 VEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAA 158


>gi|291333465|gb|ADD93166.1| putative acyl CoA dehydrogenase C terminal domain protein
           [uncultured archaeon MedDCM-OCT-S05-C724]
          Length = 388

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 31/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFL 235
           F  E       P       IG  GLTE   G+D   + ++   I DG  Y L+G K W  
Sbjct: 111 FGTEEQKNKYLPGMAKGELIGCFGLTEPDHGSDPGGMETKA--IDDGDSYVLNGAKMWIT 168

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++D  I+ A+++G++  F+V +        G     +K K   R++ T EL F +  
Sbjct: 169 NGTIADLAIVWAKLDGKIRGFIVEK-----GDKGFSAPEMKGKHSLRASITSELVFQDCR 223

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +L ++    GP      L  L+ A   ++   +  A    ++   +    I+  +
Sbjct: 224 IPKDRILPEVQGLKGP------LSCLNQARFGIAWGSLGAAMGCFHSSVDYAKSRIMFKK 277

Query: 353 PV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           P+     ++  +A +  +I     L++ L  + D+ ++  E       M  + K     +
Sbjct: 278 PIASFQLVQNKLAWMLREITKGQLLAYHLGRAKDKGEATPE-------MISLGKMNNVDI 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   + +  G +G + E  I RH
Sbjct: 331 ALQISRTSRDIHGANGILNEYPIMRH 356


>gi|85710149|ref|ZP_01041214.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688859|gb|EAQ28863.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 428

 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 98/284 (34%), Gaps = 64/284 (22%)

Query: 198 IGLGLTEKRGGTDIAAI-TSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
           +  GLTE   G+D   + T+  ++  DG+  + ++G K W     ++    M A+  G  
Sbjct: 150 VAFGLTEPDHGSDATHMETTAVREARDGVDGWLINGEKMWITGMHVATHCAMFARTSGEA 209

Query: 254 G------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           G      C LVP                        N T  LE        +   N+ T 
Sbjct: 210 GDASGITCLLVP------------------------NPTEGLEIEE----WMWTFNMPTD 241

Query: 308 -PVEDMKILIYLDSAIMSVSGMRVSLA------------------------EAIHYARRR 342
            P   +K +   DSAI+ V G  ++LA                        E++ YAR R
Sbjct: 242 HPRLSVKDVWVPDSAILGVEGRGLALAQSFVHQNRIRQAASSCGAALFCIDESVKYARER 301

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L     ++  + ++A        L F+ A   D       E   +  ++ +  Y
Sbjct: 302 KPFGEALSKNQAIQFPLVELATQAEMLRLLIFKTAWEMDNMPHEEIERTISDKVS-MCNY 360

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           W  ++       AM+  GG GY   +     YR      I  GS
Sbjct: 361 WANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRITEGS 404


>gi|295134311|ref|YP_003584987.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294982326|gb|ADF52791.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 602

 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 69/287 (24%)

Query: 202 LTEKRGGTD-----IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RV 253
           LTE   G+D       A+ S  +K     Y +SG K W  ++  ++ FI+ A++E    +
Sbjct: 153 LTEPGAGSDANSGKTKAVLSDDEKY----YSISGQKMWISNAGFANVFIVFARIEDDKNI 208

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312
             F+V    E+   NG+ +   + K+G  S++T ++ F+ T             PVE+M 
Sbjct: 209 TGFIV----ENDKENGISFGEEEKKLGIHSSSTRQVFFNET-----------KVPVENML 253

Query: 313 -------KILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPV---- 354
                  KI      A+ +++  R+ LA A   A+RR       + +  +    P+    
Sbjct: 254 ADRGEGFKI------AMNALNVGRIKLAAACLDAQRRVTENAVKYANERVQFKTPIAQFG 307

Query: 355 -MKRAIADIALDIAAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPI 399
            +K+ +A++A       + S+R A              NS  EA+ +  E  YA I   I
Sbjct: 308 AIKQKLAEMATSAYVGESASYRAAKNIEDRIHLRMESGNSHSEAELKGVE-EYA-IECSI 365

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            K  C +       E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 366 LKVACSEDIQHCSDEGIQIFGGMGFSADTPMEAAWRDARISRIYEGT 412


>gi|169608123|ref|XP_001797481.1| hypothetical protein SNOG_07128 [Phaeosphaeria nodorum SN15]
 gi|160701568|gb|EAT85779.2| hypothetical protein SNOG_07128 [Phaeosphaeria nodorum SN15]
          Length = 402

 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 32/185 (17%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVE 250
           ++T +AI    TE   G+D+A IT+   K  +G  Y ++G K ++++ +   +  +A   
Sbjct: 155 KRTCIAI----TEPEAGSDVANITTTAIKTPNGKHYIVNGTKKWITNGIWSEYSSMAVRT 210

Query: 251 GRVGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           G  G   +  L+     N G+  +R+K  +G + +A        TF   L D+ V   PV
Sbjct: 211 GGPGPAGLSMLVVPLKGNKGVNMRRIK--VGGQVSA------GTTF-IELDDVKV---PV 258

Query: 310 ED--------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           E+        M+ ++       L  AI +    RV+L+ A+ Y  +R   G  LIDQPV+
Sbjct: 259 ENLIGEEGMGMRYIMTNFNHERLSIAIGATRQSRVALSAAMEYVLKREAFGKPLIDQPVV 318

Query: 356 KRAIA 360
           +  +A
Sbjct: 319 RHRLA 323


>gi|282600651|ref|ZP_05979320.2| butyryl-CoA dehydrogenase [Subdoligranulum variabile DSM 15176]
 gi|282571700|gb|EFB77235.1| butyryl-CoA dehydrogenase [Subdoligranulum variabile DSM 15176]
          Length = 394

 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 63/314 (20%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK---IS 222
           TP     + PK+ S E+              IG  GLTE   GTD     +QGQ+   + 
Sbjct: 108 TPEQKAKYLPKLCSGEW--------------IGAFGLTEPGAGTD-----AQGQQTFAVD 148

Query: 223 DGI-YCLSGHKWFLSSP-MSDAFIMLA----------QVEGRVGCFLVPRLLEDGSPNGL 270
           +G  + L+G K F+++   ++ FI++A          + +  +  F+V R     +  G 
Sbjct: 149 EGDHWKLNGSKIFITNAGYANVFIIIAVTGTVLDKRGRKQKEISAFIVER-----TDPGF 203

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVEDMKILIYLDSAIM 323
              + ++K+G R ++T EL   +       LLG       ++   ++  +I I    A  
Sbjct: 204 KVGKPEDKMGIRGSSTCELIMEDCIIPKDRLLGVKGKGFQLAMATLDGGRIGI----AAQ 259

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NS 379
           ++     +L E + Y + R   G  +      +  +A++   + AA  L ++ A    + 
Sbjct: 260 ALGIAEGALDETVAYVKERKQFGRSISAFQNTQFELAEMKARVDAAKFLVYQAALKKQSV 319

Query: 380 FDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D AK+R S EAA A+++A  T       A  V    ++  GG GY  +  I R  R++ 
Sbjct: 320 MDGAKARYSVEAAEAKLIAART-------ASDVTRRCLQLFGGYGYTRDYPIERMMRDAK 372

Query: 439 ANSILLGSGNAMVL 452
              I  G+    ++
Sbjct: 373 ITEIYEGTSEVQMM 386


>gi|146282063|ref|YP_001172216.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145570268|gb|ABP79374.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 387

 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +   NGL  Q 
Sbjct: 147 YVINGQKVWISRIQHSDLMILLARTTPLAEVQRKSEG-MSIFLVD--LREAIGNGLTVQP 203

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 204 IANMVNHETN---ELFFDNLEIPASSLIGEEGKGFRYILDGLNAE-------RTLI---- 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + ++  YAR R V G  +     ++  IA+  ++I AA  + +R  + +
Sbjct: 250 AAECIGDGRWFVEKSAQYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACDEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D  ++    A  A       KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 310 DAGRNAGAAANMA-------KYLAAKASWEAANACLQTHGGFGFANEYDVERKFRET 359


>gi|319780172|ref|YP_004139648.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166060|gb|ADV09598.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  + +   +  D  + L+G K F+S + ++D A + +A  E       
Sbjct: 123 LAMTEPGAGSDLRGMKATAVQDGDD-WVLNGTKHFISHADLADFAIVFMASGEEDSPRGK 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V     D    G   +     + +R      LEF +       +LG+++   
Sbjct: 182 RKKITAFFV-----DKGTKGFTVRDGYRNVSHRGYTNAILEFDDCRLPGAQVLGEVHKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L      +     +L  A+ YA +R   G  +     +   +AD+A ++
Sbjct: 237 DVANSWLGATRLQVGATCLGRAERALGHAVEYAAQRQQFGQQIGKFQGVSFKLADMATEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + F     +D+     ++ A A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAADLMVFEAGWKYDQGTVTDQDMAMAKLKA-------TEMLAYVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DLPLERIWRDARVERIWEGT 369


>gi|284041881|ref|YP_003392221.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946102|gb|ADB48846.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 389

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 29/258 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG---- 254
             +TE   G+D+ AI  +  +  D  + L+G K F++      F I++A  +  +G    
Sbjct: 126 FAVTEPDAGSDLTAIRMRAVRDGDD-WVLNGEKTFITRGREADFSIVIAVTDAELGYRGG 184

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA----TVELEFSNTFGFLLGDLNVSTGP 308
              FLV R L      G   + +      R  +     V +   N  G +     ++   
Sbjct: 185 FTAFLVDRAL------GWTSETIDTMGPARPISMAFDDVRVPHRNVLGEVGDGFRLAMEW 238

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   + +I       ++      L  A+ YA +R   G  + +  +++  +AD  +++ +
Sbjct: 239 IGRGRYVI----PSQAIGAAERLLGMAVEYATQRRTFGKPIGEHQMIQAMLADSEVELES 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A + D+ +    +++ A++           MA  V+   M+  GG GY  E 
Sbjct: 295 ARWLVLLAAWTVDQGRDPRHQSSMAKLAG-------ATMANRVVDRVMQIHGGMGYTREL 347

Query: 429 SIARHYRESPANSILLGS 446
            I R YRE+    I  G+
Sbjct: 348 PIERWYREARLWRIYEGT 365


>gi|261883715|ref|ZP_06007754.1| acyl-CoA dehydrogenase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 203

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 7/129 (5%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A
Sbjct: 64  LHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAA 123

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  ++ S EA+ A++ A        +M   V    ++  GG+GY+ E +I R YR+ 
Sbjct: 124 RKRDSGQNVSTEASCAKMFAT-------EMCGRVADRCVQIHGGAGYVSEYAIERFYRDV 176

Query: 438 PANSILLGS 446
               I  G+
Sbjct: 177 RLFRIYEGT 185


>gi|148685768|gb|EDL17715.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_c
           [Mus musculus]
          Length = 333

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++  K S   Y L+G K W   +  ++ F++ A V+   G     C
Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           FLV R  E     G    + +NK+G R+++T +L F N 
Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV 268


>gi|148556219|ref|YP_001263801.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148501409|gb|ABQ69663.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 390

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 143/376 (38%), Gaps = 58/376 (15%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIW-----DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           E  P +  ++RR   DG     W      R  +P+ +K           L+ +L      
Sbjct: 36  ESGPVYRDVIRRMGRDGWLTPGWPVDYGGRGLDPLTQK----------ILLEELVLAEAP 85

Query: 153 SPSVTSASM-VALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            P VT  ++  ALM   T +  ++  P I + E             +   +G +E   GT
Sbjct: 86  FPFVTVNTVGPALMRLGTEKQKREILPCIATGE-------------LIFAIGYSEPGAGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGRVGCFLVPRLLED 264
           D+A++ ++  +  D  Y ++G K F S      ++ LA     Q     G  +   L+ D
Sbjct: 133 DLASLATRAVRDGDD-YVVNGQKIFTSGAEGADYVFLAVRTDPQAPPHKGITI---LMMD 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G     +    G R+N T   +       ++G++N     + +      +  A +S
Sbjct: 189 TRLPGFSVSPIWTVGGFRTNVTYYEDVRVPADMVIGEVNAGWRLIAEQLNHERIGLAALS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            SG      + + + R      G LID P ++  + +    + A   +  R+A    +  
Sbjct: 249 YSG-NGCFDQVVQWVRETPAGAGRLIDVPWVRSTLGEAYALLRAIGVMGNRVAAQVAQGS 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS--------IARHYRE 436
           +R++       +A   K +  +    V+   ++ +G +G I E S        I R YR+
Sbjct: 308 TRAD-------LASGLKVFGTEGMIRVMRLLLDVLGPAGLIREGSPGAVLRGRIEREYRK 360

Query: 437 SPANSILLGSGNAMVL 452
              N+   G G A VL
Sbjct: 361 CQINT--FGGGTAEVL 374


>gi|116671601|ref|YP_832534.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
           FB24]
 gi|116611710|gb|ABK04434.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
          Length = 399

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 33/309 (10%)

Query: 136 RAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
           R+A  Y +A  +LEAG   S   T  S+   +    +HK W  +   +E+ P     M  
Sbjct: 81  RSAVEYGLAAMELEAGD--SGIRTFVSVQGSLAMTAIHK-WGSEDQKQEWLPR----MAA 133

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
             V     LTE   G+D +++T+  ++     D  + L G K W   + ++   ++ A  
Sbjct: 134 GEVIGCFALTEPTAGSDPSSMTTVARRDGSGDDAGWVLDGVKRWIGLASVAGVMVVWAMT 193

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  V  FLVP     G+P G+    +  K+  R++   ++ F    G  LG   +  G  
Sbjct: 194 DDGVRGFLVPA----GTP-GVTATPINRKLSMRASIQCDVAFD---GVRLGPEALLPGAR 245

Query: 310 EDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L+ A   ++       R S   A+ Y++ R   G  L    + +  + ++ L
Sbjct: 246 GLRGPFTCLNEARYGIAWGAMGAARDSYEAALKYSQDRLQFGRPLAGYQLTQEKLVNMLL 305

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I   T L+  L    D    R E+ +  ++          + A A+  EA   +GG+G 
Sbjct: 306 EIQKGTMLALHLGRLKDAGTLRPEQISLGKLN-------NVREALAIAREARTILGGNGI 358

Query: 425 IEERSIARH 433
             + S  RH
Sbjct: 359 TLDYSPLRH 367


>gi|15596076|ref|NP_249570.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|116048803|ref|YP_792397.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893152|ref|YP_002442021.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254239232|ref|ZP_04932555.1| hypothetical protein PACG_05423 [Pseudomonas aeruginosa C3719]
 gi|254245166|ref|ZP_04938488.1| hypothetical protein PA2G_06054 [Pseudomonas aeruginosa 2192]
 gi|296390767|ref|ZP_06880242.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313105762|ref|ZP_07792025.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946778|gb|AAG04268.1|AE004522_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115584024|gb|ABJ10039.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126171163|gb|EAZ56674.1| hypothetical protein PACG_05423 [Pseudomonas aeruginosa C3719]
 gi|126198544|gb|EAZ62607.1| hypothetical protein PA2G_06054 [Pseudomonas aeruginosa 2192]
 gi|218773380|emb|CAW29192.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310878527|gb|EFQ37121.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 386

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +    GL  Q 
Sbjct: 146 YVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEG-MSIFLVD--LREAIGKGLTVQP 202

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 203 IANMVNHETN---ELFFDNLEIPADSLIGEEGKGFRYILDGLNAE-------RTLI---- 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +
Sbjct: 249 AAECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACQEY 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 309 DAGLN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 358


>gi|319951694|ref|YP_004162961.1| butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319420354|gb|ADV47463.1| Butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 599

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 45/275 (16%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++     FI+ A++  +  +  F+
Sbjct: 149 LTEPGAGSDANSGKTKAVLSEDGKHYSISGQKMWISNAGFCSVFIVFARIGDDKNITGFI 208

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           V    E+   NG+     + K+G  S++T ++ F+ T              F   +  LN
Sbjct: 209 V----ENDPSNGISLGDEEKKLGIHSSSTRQVFFNETKVPVENMLSDRGNGFKIAMNALN 264

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V           I L +A +     R  + EA  YA  R      +I+   +K  IA++ 
Sbjct: 265 VGR---------IKLAAACLDAQ--RRVIGEATKYANERIQFKTPIINFGAIKAKIANMV 313

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411
            ++ A  + ++R A + +      EA   S + A  +      I   I K    +   + 
Sbjct: 314 TNVYADESAAYRAAKNIEDRIAMREAAGNSHQEAELKGVEEYAIECSILKVAVSEDCQST 373

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E ++  GG G+  +  +   +R+S    I  G+
Sbjct: 374 TDEGIQIFGGMGFSADTPMESAWRDSRIARIYEGT 408


>gi|301631735|ref|XP_002944951.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 351

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 34/173 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T  ++ AL+T  +  +   +  K+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTDGAIEALLTAGSDALKATYLEKLISGEWTGT-------------MNLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258
           D++ + ++ +   DG Y L G K F++     M+D  +  +LA+V G       +  F+ 
Sbjct: 171 DLSLVRTKAEPQPDGSYRLFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVC 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLN 303
           P+ L +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N
Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLVGEEN 283


>gi|271499363|ref|YP_003332388.1| acyl-CoA dehydrogenase domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270342918|gb|ACZ75683.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech586]
          Length = 383

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L +A  S      +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A
Sbjct: 243 LINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVMKVA 302

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +S        R  A + K +C + A  VI +A++ +GG GY ++  ++R +R+ 
Sbjct: 303 WQADMHQS-------LRTSAALCKLYCARTALEVIDDAIQIMGGLGYTDDARVSRFWRDV 355

Query: 438 PANSILLGSGNAMV 451
               I  G+   M+
Sbjct: 356 RCERIGGGTDEIMI 369


>gi|167645024|ref|YP_001682687.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167347454|gb|ABZ70189.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 569

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 46/338 (13%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  G L + S  +  ++    T    + W PKI        + A +  T+V      T
Sbjct: 257 AWIGVGSLATRSEIAGELILTGGTEAQKQYWLPKI--------SDASILPTAV-----FT 303

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----GCFLV 258
           E   G+D+ ++ ++     D  Y ++G+K W   +  +D   +L + E       G  ++
Sbjct: 304 EPNTGSDLGSLRTRAALTGD-QYVVTGNKTWITHAARADVMTLLVRTEPDTTDYRGLSML 362

Query: 259 ----PRLLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVED 311
               PR +E  D   +G+    +   IG R     EL F    GF +   N+  G P + 
Sbjct: 363 LAPKPRGVEGNDFPADGMSGGEI-GVIGYRGMKEYELAFD---GFTVPAENLLGGVPGQG 418

Query: 312 MKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K L+   +SA +  +   V +A+A     + YA  R   G  + + P +   +A +A +
Sbjct: 419 FKQLMATFESARIQTAARAVGVAQAALETGLGYALDRKQFGQAIFEFPRVHNKLAMMAAE 478

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I     L++  A   DE K    EA  A+++A    +            A++  GG+G+ 
Sbjct: 479 IMGVRQLTYFAARQKDEGKRCDLEAGMAKLIAARVAWAAAD-------NALQIHGGNGFA 531

Query: 426 EERSIARHYRESPANSILLGSG--NAMVLDVLNLLEKG 461
            E   +R   ++   +I  G+G   A V+    LLE+G
Sbjct: 532 MEYVASRLLADARILNIFEGAGEIQAQVI-ARRLLEEG 568


>gi|332308237|ref|YP_004436088.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175566|gb|AEE24820.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 377

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 29/261 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L   E +   D+A I++Q + + D  + L+GHK   L++ M+D  +++A    R   F  
Sbjct: 123 LAYCEPQSRYDLANISTQAE-VFDNEFVLNGHKSVVLNAAMADMLVVIA----RTSSFQT 177

Query: 259 PR-----LLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
            +     +L D    G+   CY  +            ++ FSN       LLG+L+ +  
Sbjct: 178 DKNGLSAILVDPQSPGVDIRCYPTVDG------FQAADIYFSNVTVAKSSLLGNLDDAFP 231

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            VE             ++  M +   + + Y + R   G  L     ++  +AD+ ++  
Sbjct: 232 AVEKTVDFATFGVCAEAIGMMEMLYKKTVEYTKERQQFGKPLASFQALQHRMADMFIEYE 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A +     A   D  +       +A       K    K A  +  EA++  GG G  +E
Sbjct: 292 QAKSAVLMAAMELDSTQ------GFAPKEVSAAKSRVGKAARLIGQEAVQLHGGMGVTDE 345

Query: 428 RSIARHYRESPANSILLGSGN 448
             I  +++   A   +LGS +
Sbjct: 346 LDIGHYFKRLTAIQFVLGSTD 366


>gi|302529941|ref|ZP_07282283.1| butyryl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302438836|gb|EFL10652.1| butyryl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 440

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 34/301 (11%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +++PS  S ++VA     +   D+ P  F+ E  P           A  L L E+    D
Sbjct: 166 VLAPSAVSTALVA-WGDEQQQADYVPA-FTGEQVP-----------AAALALLERTPLFD 212

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPN 268
                ++ ++   G Y L G K  +  +  ++ F++ A +EGR    FLV     + S  
Sbjct: 213 PFKPATKAKRTPKG-YQLDGVKSLVPRAAEAELFLVSADLEGRGPALFLV-----ESSNA 266

Query: 269 GLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +  +  +G R  AT +L   + S   G LLG          ++  L  L  A ++ 
Sbjct: 267 GVTIES-EPAMGLRGAATGKLHLEKVSLPAGALLGGGKADV--FTEVVRLSRLGWAALAA 323

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L   + Y   R   G  +  +  +  ++ADIA+++     ++ R A   ++ K 
Sbjct: 324 GVGKAVLDYVVPYVNERTAFGEPISHRQAVAFSVADIAIELEGLRLVTLRAAARAEQGKE 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EAA AR +A                  ++ +GG G+++E  + R YR+  A  ++ G
Sbjct: 384 YAREAALARKLATDKGMQIGNA-------GVQLLGGHGFVKEHPVERWYRDLRAIGVMEG 436

Query: 446 S 446
           +
Sbjct: 437 A 437


>gi|240849543|ref|NP_001155567.1| glutaryl-Coenzyme A dehydrogenase-like [Acyrthosiphon pisum]
 gi|239792397|dbj|BAH72548.1| ACYPI004433 [Acyrthosiphon pisum]
          Length = 414

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLV 258
           LTE   G+DI  + S+ +  SD   Y L+G K W  ++P++D F++ A+  +GRV  F+V
Sbjct: 158 LTEPNAGSDIGTMESKAKYDSDTKSYVLNGAKTWITNAPVADVFVVWARCDDGRVRGFVV 217

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            R        GL    +  K+  R+++T  +   N
Sbjct: 218 ER-----GTAGLSTAVIPGKMSLRASSTGSVYMDN 247


>gi|134291183|ref|YP_001114952.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134134372|gb|ABO58697.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 413

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 35/268 (13%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257
              +TE   G+D  A+ +  +K + G + L+G K F+++   +D  I  A +    G F 
Sbjct: 135 AFAITEPDCGSDATAMRTTARKTARG-WVLNGTKCFITNGARADDVITFATINRHAGRFG 193

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL--GD---LNVS-TGP 308
           V     D +  G    R++N +G R++    L +++       LL  GD   LN + +G 
Sbjct: 194 VRAFHVDRNIPGFSVVRIENMVGLRASQLAVLSYTDCEVPDDALLRRGDEKSLNDAFSGA 253

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR--------AIA 360
                    L SA+M  +  RV    A ++   RH         PV +R        A+ 
Sbjct: 254 QHAWNYFRPLLSAVMVGACRRVRDDLATYFEAGRH---------PVNQRQCTADVNAALL 304

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           DI   I  A  L    A   D+  +   +++ A       K +  ++A  V   A++  G
Sbjct: 305 DIDRQITTAQLLCRHAAWKTDQGIATPMDSSMA-------KAYASQIAARVTRTAIDFAG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448
             G     S+ + YR++ A  I+ G+G+
Sbjct: 358 LDGVTAFPSLEQSYRDAKAFDIMEGTGD 385


>gi|115467962|ref|NP_001057580.1| Os06g0346300 [Oryza sativa Japonica Group]
 gi|113595620|dbj|BAF19494.1| Os06g0346300 [Oryza sativa Japonica Group]
 gi|125597140|gb|EAZ36920.1| hypothetical protein OsJ_21259 [Oryza sativa Japonica Group]
          Length = 304

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 39/267 (14%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA- 247
           P+ K        L+E   G+D +++ +  +K+  G + L+G K W  +S  +D F++LA 
Sbjct: 19  PLSKMQKVCVYALSEPNHGSDASSLNTTARKVPGG-WILNGQKRWPANSSFADIFVVLAC 77

Query: 248 -QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELE-----------FSN 293
                ++  F+V     +G   GL   ++ NK+  R   N  + LE            +N
Sbjct: 78  NTSTNQINGFIV-----NGGAPGLKISKIDNKMSLRVVQNCDILLEDVFVPDDDRLPGAN 132

Query: 294 TFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           +F  L+   ++S   + D  +  Y      L  + + V+ + + +A  ++ A  R++   
Sbjct: 133 SFQDLVKIYSISPHTIGDTDLTDYVAYIQALSFSRVIVAWISIGIAAGVYDACLRYLGER 192

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
                P+    +    L       L +RL    D  +  + +A+       + K W  K 
Sbjct: 193 KQFGAPLAAFQLNQEKL----MWLLGWRLYELHDSGRMTTGQAS-------LGKAWITKK 241

Query: 408 APAVIAEAMECIGGSGYIEERSIARHY 434
           A   +A   E +GG+G + +  + + +
Sbjct: 242 ARETVALGRELLGGNGIVTDFHVGKAF 268


>gi|222085222|ref|YP_002543752.1| isovaleryl-CoA dehydrogenase protein [Agrobacterium radiobacter
           K84]
 gi|221722670|gb|ACM25826.1| isovaleryl-CoA dehydrogenase protein [Agrobacterium radiobacter
           K84]
          Length = 387

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 30/260 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++    +K  D  Y L+G K W  + P ++  ++ A+     G   +
Sbjct: 128 LAMSEPNSGSDVVSMKLHAEKRGD-RYILNGSKMWITNGPDAEVLVVYAKTTPDAGPRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G + G   V       
Sbjct: 187 TAFLVEKGFKGFSVGQKLDKLGMRGSNTSELIFIDCEVPAENVLGQVDGGARV------- 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             ++  LD   + +SG  V +  A     + Y   R   G  + +  +M+  +AD+ + +
Sbjct: 240 --LMSGLDYERVVLSGGPVGIMAACMDVVLPYLHERKQFGQPIGEFQLMQGKLADMYVTM 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A  + +A + D  ++  ++AA   +       +  + A A+  E ++ +GG+GY  
Sbjct: 298 NAARAYVYAVAAACDRGETTRKDAAGCIL-------YAAEKATALALECIQALGGNGYTN 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +    R  R++    I  G+
Sbjct: 351 DYPAGRLLRDAKLYEIGAGT 370


>gi|293608196|ref|ZP_06690499.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828769|gb|EFF87131.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 401

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISF 223


>gi|222082574|ref|YP_002541939.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221727253|gb|ACM30342.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 386

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 28/271 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247
           P  +      L +TE   G+D+  +    ++  DG  + L+G K F+S + ++D  I+ A
Sbjct: 112 PAVRGEKVDALAITEPDAGSDMRGMKCAARQ--DGSDFVLNGTKHFISHADVADFVIVFA 169

Query: 248 Q---------VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
                     ++ ++  FLV R    G+P G    +    + +R      L F++     
Sbjct: 170 ATGEEETPKGIKKKITAFLVDR----GTP-GFEILKGYESLSHRGYHNSVLNFTDCRLPK 224

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             +LGD++       +      L  A   V   R     A+ YA  R   G  +     +
Sbjct: 225 SQVLGDVHRGFDIANEWLYGTRLTVAATCVGRARRVFDLALPYAAERKQFGRPIGANQGV 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A++  +I AA  L+   A   D   S + E A A       K +  +M   V  EA
Sbjct: 285 SFKLAEMITEIDAADLLTLSAAWRLDAGLSANREVASA-------KLYASEMLARVTDEA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG G +++  +AR +R++    I  G+
Sbjct: 338 IQIFGGMGLMDDLPLARFWRDARVERIWDGT 368


>gi|218673248|ref|ZP_03522917.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli GR56]
          Length = 386

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 28/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ---------V 249
           L +TE   G+D+  +    ++   G + L+G K F+S + ++D  I+ A          +
Sbjct: 122 LAITEPDAGSDMRGMKCAARR-DGGDFVLNGTKHFISHADVADFVIVFAATGEEETPKGI 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           + ++  FLV R    G+P G    +  + + +R      L F++       +LG+++   
Sbjct: 181 KKKITAFLVDR----GTP-GFEILKGYDSVSHRGYHNSTLSFTDCRIPEAQVLGEVHRGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALD 365
                      L  A   V   R     A+ YA  RR     I  +Q V  + +AD+  +
Sbjct: 236 DIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERRQFGRPIGANQGVSFK-LADMITE 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+   A   D   +   + A A++ A        +M   V  EA++  GG G +
Sbjct: 295 IDAAEWLTLSAAWRLDAGLAADRQIASAKLYA-------SEMLAHVTDEAIQIYGGMGLM 347

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  +AR +R++    I  G+
Sbjct: 348 DDLPLARFWRDARVERIWDGT 368


>gi|241763898|ref|ZP_04761941.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241366793|gb|EER61225.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 630

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 66/293 (22%)

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----------CFLVPRLLED------ 264
           Y L G+K ++SS   +       ++LA++ G  G           F+VP+ L D      
Sbjct: 202 YRLRGNKMWISSGDHELTENIVHLVLAKIPGPDGKLVPGVKGISLFIVPKKLVDIKGNLT 261

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN-------------------TFGFLLGD---- 301
           G  N +    L +K+G R      L F                       G+L+G     
Sbjct: 262 GERNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVRAEQGGGLDGHGAGAIGYLVGKPGEG 321

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------- 348
           L      + + +I I + + ++ ++G   SL     YA+ R     I             
Sbjct: 322 LKCMFHMMNEARISIGMAATMLGLAGYYASL----DYAKTRLQGRPIGEAGKDASAPQVR 377

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR----IMAPITKYW 403
           LI+   +KR +         A AL+   A   DE ++  +E AA AR    ++ PI K W
Sbjct: 378 LIEHADVKRMLLAQKSYGEGALALNLYCARLVDEGRTGNAEAAAQARLLLEVLTPIAKSW 437

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +      + A++  GG GY  +  + +++R++  N I  G+      D+L 
Sbjct: 438 PSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAADLLG 490


>gi|160895647|ref|YP_001561229.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361231|gb|ABX32844.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 388

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 55/244 (22%)

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K W      SD  I+LA+           EG +  F+V   L +   +GL
Sbjct: 144 KDGRYVVNGQKVWISRVQHSDWMILLARTTPLAEVKKKSEG-MSIFMVD--LAEAQKSGL 200

Query: 271 CYQRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILI 316
             + + N + + +N   EL F N               F ++L  LN         + LI
Sbjct: 201 TVRPIPNMVNHETN---ELFFENLEIPEENLIGEEGKGFKYILDGLNAE-------RTLI 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      L    +Y R R+V G  +     ++  IAD  +++ AA  + ++ 
Sbjct: 251 ----AAECIGDGYWFLDRVTNYVRDRNVFGRPIGQNQGVQFPIADAFIEVEAANLMRWKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARH 433
              FD  ++   +A  A+ +A          A A    A  CI   GG G+  E  + R 
Sbjct: 307 CEMFDANQAMGAQANMAKYLA----------AKASWEAANACIQFHGGFGFACEYDVERK 356

Query: 434 YRES 437
           +RE+
Sbjct: 357 FRET 360


>gi|50084589|ref|YP_046099.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|2623972|emb|CAA05331.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530565|emb|CAG68277.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 401

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  D  Y L+G K +++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTAVKAGDE-YILNGEKIYVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAAISF 223


>gi|295835944|ref|ZP_06822877.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197698409|gb|EDY45342.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 598

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 119/304 (39%), Gaps = 34/304 (11%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV-- 249
           K    +  GL+E+  G+D+ A   + + +  G Y LSG KW + ++  +DA ++ A+   
Sbjct: 118 KNGQRLSWGLSERGYGSDLLANAMRARPVEGG-YLLSGEKWLIGNATRADAMVVFARTGE 176

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTF---GFLLGDLNVS 305
            G  G F V  L +  +P G   +  K ++ G R      +     F     L+G     
Sbjct: 177 RGGSGDFSVLVLDKRAAPAGSVVELPKERLHGIRGMDLSGVRVDEVFVPRSALIGREGQG 236

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                          + M++S +   L   + +   R + G  + D P  +R + ++  D
Sbjct: 237 LEIALKAAQAARAQISGMAISAVDTGLRVTLDFTEGRVILGRTVSDIPYSRRQLTEVFAD 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A A+S        +A  +      A + + + KY    M    +++    +G   ++
Sbjct: 297 LMVADAVSLGAVRGLQQAPEQ------ASVHSSVAKYLVPTMMERAMSQLAVVLGARYFL 350

Query: 426 EERSIARHY-------RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            +     HY       R+ P  +     GN     V+NL     NL  QL   L +  G+
Sbjct: 351 RDHP---HYGVFQKMLRDLPVAN--FADGNT----VVNL----RNLAGQLQPLLTRLAGA 397

Query: 479 SGKK 482
           +G +
Sbjct: 398 TGPE 401


>gi|33603674|ref|NP_891234.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577799|emb|CAE35064.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 391

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 17/247 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA----QVEGRVG 254
           + LTE   GT+  A+ S  +    G + L+G K W  +   +   +++A    Q EG   
Sbjct: 125 MALTEPDAGTNTLAMKSYAEAEPAGGWRLNGRKIWITAVDAAQKMLVVARTSRQAEGARP 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311
              +   + D    GL Y  + +K+G ++ +   + F N       L+G L+     + D
Sbjct: 185 SDGISMFIIDVEREGLSYSAI-DKVGTQTLSACSVFFDNVRIEPHELVGTLDKGFRELLD 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAAT 370
           +     + +    +   R++   A+ YA  R V GG  I     ++  +A    ++  A 
Sbjct: 244 VLNTERIVTTASLIGAGRLAKRLAVQYANDRKVFGGKPISSYQGLQFPLAQSHAELQCAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ + A   D+      EA  A+++         + A   I  +M+ +GG GY  E  +
Sbjct: 304 LMNLKAAALCDQGLPYGTEANIAKLIG-------SQAASHAIERSMQTMGGMGYAREFHV 356

Query: 431 ARHYRES 437
            R +R++
Sbjct: 357 ERLWRDA 363


>gi|150025774|ref|YP_001296600.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772315|emb|CAL43793.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 596

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 113/276 (40%), Gaps = 47/276 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFL 257
           LTE   G+D  +  ++     DG  Y ++G K W  ++     FI+ A++  +  +  F+
Sbjct: 147 LTEPGAGSDANSGKTKAVLSEDGKTYSITGQKMWISNAGFCSVFIVFARIGDDKNITGFI 206

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           V    E+   NG+     ++K+G R+++T ++ F++T              F   +  LN
Sbjct: 207 V----ENTPDNGISMNEEEHKLGIRASSTRQVFFNDTKVPAENMLSERGNGFKIAMNALN 262

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V           I L +A +     R  + +A++Y+  R      +     ++  +A++A
Sbjct: 263 VGR---------IKLAAACLDAQ--RRVITQAVNYSNERIQFNTAISQFGAIRSKLAEMA 311

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPA 410
               A  + ++R A   ++  +  E A              YA I   I K    +   A
Sbjct: 312 TSCYAGESATYRAAKDIEDRITEREAAGSSHQEAELKGVEEYA-IECSILKVAVSEDVQA 370

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              E ++  GG G+ E+  +   +R++    I  G+
Sbjct: 371 CADEGIQIFGGMGFSEDTPMESAWRDARIARIYEGT 406


>gi|299770345|ref|YP_003732371.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700433|gb|ADI90998.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 401

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISF 223


>gi|11498596|ref|NP_069824.1| glutaryl-CoA dehydrogenase (gcdH) [Archaeoglobus fulgidus DSM 4304]
 gi|2649607|gb|AAB90252.1| glutaryl-CoA dehydrogenase (gcdH) [Archaeoglobus fulgidus DSM 4304]
          Length = 395

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 24/242 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCF 256
            GLTE   G+D  ++ +  ++  D  + L+G K W   + ++D  ++ A+   +G++  F
Sbjct: 134 FGLTEPNHGSDPGSMEATARRDGDE-WVLNGTKTWISEADVADIAVVWARDVEDGKIKGF 192

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V R        G     +  K   R+ +  EL   N        L  + G    +  L 
Sbjct: 193 IVER-----GTKGFQQTAITKKASMRAGSVGELGLVNCRVPEENRLPEARGLGAPLSCL- 246

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             + A   +S   +  A      A++Y + R   G  L    +++  + ++ ++I     
Sbjct: 247 --NQARFGISWGAIGAAMDCYETALNYTKERKQFGAPLASYQLVQEKLVNMLIEITKGQL 304

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++RLA   DE K+ +E+ + A+        +C +        A E +G +G   + S  
Sbjct: 305 LAWRLAKLMDEGKATTEQISMAKKNNVRVARYCART-------ARELLGANGISLDYSPI 357

Query: 432 RH 433
           RH
Sbjct: 358 RH 359


>gi|13474205|ref|NP_105773.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14024957|dbj|BAB51559.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 387

 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  + +   +  D  + L+G K F+S + ++D A + +A  E       
Sbjct: 123 LAMTEPGAGSDLRGMKASAVQDGDD-WVLNGTKHFISHADLADFAIVFMASGEEDSPRGK 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V     D    G   +     + +R      LEF +       +LG+++   
Sbjct: 182 RKKITAFFV-----DKGTKGFTVRDGYRNVSHRGYTNAILEFDDCRLPASQVLGEVHKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L      +     +L  A+ YA +R   G  +     +   +AD+A ++
Sbjct: 237 DVANSWLGATRLQVGATCLGRAERALGHAVEYAAQRQQFGQQIGKFQGVSFKLADMATEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + F     +D+     ++ A A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAADLMVFEAGWKYDQGTVTDQDMAMAKLKA-------TEMLAFVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DLPLERIWRDARVERIWEGT 369


>gi|325122073|gb|ADY81596.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 401

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISF 223


>gi|312140598|ref|YP_004007934.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311889937|emb|CBH49254.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 402

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 37/267 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML----AQVEGR-- 252
           + +TE   G+D AA+T+    + DG  + L+G K F+++      +++     + +GR  
Sbjct: 132 MAITEPSFGSDSAAVTTTA--VLDGDEWVLNGEKIFVTAGERSTHVVVWATVDKTKGRAA 189

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD--LNVSTG 307
           +  F+VPR        GL   RL++K+G +++ T  L   +       LLGD  +NV  G
Sbjct: 190 IKSFVVPR-----EAPGLSVARLEHKLGIKASDTAVLLLQDCRIPKDNLLGDPEVNVEKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQPVMKR-----AI 359
               M+     D+    V+GM + L  A +   R      G+ I  D P   +       
Sbjct: 245 FAGVMQTF---DNTRPIVAGMAIGLGRAALEELRGILEEAGVEISYDTPAYNQHAAAAEF 301

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  A+  L+ R A   D  K  S EA+ ++  A        +   AV  +A+E  
Sbjct: 302 LALEADWEASYLLALRAAWMADNKKPNSLEASMSKAKA-------GRTGTAVSLKAVELA 354

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G  GY +   + +  R+S    I  G+
Sbjct: 355 GSYGYSQRPLLEKWARDSKILDIFEGT 381


>gi|24214630|ref|NP_712111.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45657829|ref|YP_001915.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24195607|gb|AAN49129.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601069|gb|AAS70552.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 20/259 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + +TE   G+D+  I +   + SD  Y ++G K F+S+      I+ A         L
Sbjct: 122 LAVAMTEPGAGSDLKNIRTSAIEKSDH-YVVNGQKTFISNGQLANLIITAVKHDNGTMSL 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +  ++E+G   G    R   KIG ++  T EL +++    ++   N+     +  + L+ 
Sbjct: 181 L--MVEEGM-KGFERGRRLEKIGLKAQDTSELYYNDV---IVPKENLIGKQGQGFRYLMQ 234

Query: 318 ---LDSAIMSVSGMRVS-LAEAI--HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
               +  ++S++ +  + L + I   Y + R   G  +     +K  +A++A ++     
Sbjct: 235 KLATERLVLSIAAVEATALVQRITLQYIKERQAFGKKIGTFQNIKFKMAEMATELEMCRT 294

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              ++       +S + EA+ A       K++  +M      E ++  GG GY+ E  IA
Sbjct: 295 FVDKITLETIAGRSNTAEASMA-------KWYSTEMQKRHTDECLQFFGGYGYMMEYPIA 347

Query: 432 RHYRESPANSILLGSGNAM 450
           R Y ++   +I  G+   M
Sbjct: 348 RAYLDARIQTIYAGTTEIM 366


>gi|317125507|ref|YP_004099619.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589595|gb|ADU48892.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 423

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 31/276 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D  AI +   K  D  Y L+G K F+++   ++  ++ A ++  +G   +
Sbjct: 153 MAITEPDAGSDSGAIRTTAVKDGDD-YVLNGEKIFVTAGERAELVVVWATLDRSLGKKAI 211

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST--------G 307
              + + S  G    RL++K+G R++ T      N       LLGD  +ST         
Sbjct: 212 KSFVVERSNPGFTLVRLEHKLGIRASDTASFHLDNCRVPARDLLGDPEISTETGFGGAMA 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             ++ + L+    A M+V   R  L        R  V+  +  D+P + ++ A   L   
Sbjct: 272 TFDNTRPLV----AAMAVGLTRACLDTTTELLARAGVT--VDWDRPPLSQSAAAARLAEL 325

Query: 368 -----AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                AA  L  R A   D  +  S EA+ A+  A  T   C  +A A +    E  G +
Sbjct: 326 EAEYQAAYLLMMRAAWMADNGRPNSMEASMAKAKAGRT---CVDVALACV----ELGGPT 378

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R++    I  G+    +L V   L
Sbjct: 379 GYAETELLEKWARDAKILDIFEGTQQIQLLVVARRL 414


>gi|312140597|ref|YP_004007933.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325675780|ref|ZP_08155464.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311889936|emb|CBH49253.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325553751|gb|EGD23429.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 470

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
           ++E R   D  A+ ++  +   G Y L+G K  + +  S + F++ A+++GR   F+V  
Sbjct: 231 VSEPRALFDPFALQTKAVRSPSG-YKLNGVKSLVPAAGSAELFVVAAELDGRPAFFIV-- 287

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE--DMKIL 315
              +    GL  +     +G R+     L  ++       +LGD +      E  D   L
Sbjct: 288 ---ESDTKGLVVE-ADPSMGLRAAGLGRLVLTDVAVPESAILGDGDADQRAREYADAVRL 343

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A ++V   +  L   I YA  R   G  +  +  +   IA+IA+++ +   ++ R
Sbjct: 344 ARLGWASLAVGTSQAVLDYVIPYANEREAFGEPISHRQAVAFMIANIAIELDSMRLVTLR 403

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A+  ++  S + EAA AR +A             +  + ++ +GG G+ +E  + R YR
Sbjct: 404 GASRAEQGLSFAREAALARKLA-------SDKGMQIGLDGVQLLGGHGFTKEHPVERWYR 456

Query: 436 E 436
           +
Sbjct: 457 D 457


>gi|311742534|ref|ZP_07716343.1| butyryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314162|gb|EFQ84070.1| butyryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 404

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 35/266 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAIT+   K  D  Y L+G K +++S   +D  ++ A ++  +G    
Sbjct: 134 MAITEPSFGSDSAAITTTAVKDGDH-YILNGEKIYVTSGERADTVVVWATLDKSLGRAAI 192

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG--DLNVSTGP 308
             F+VP+ L      G+  +RL++K+G R++ T  +   N       LLG  +++V  G 
Sbjct: 193 KSFVVPKSLP-----GIRVERLEHKLGIRASDTAVILLENCRVPAENLLGSAEVDVKQGF 247

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILI--DQPVMKRAIAD---I 362
              M      D+    V+GM V LA  A+   R    + G+ I  D+P   ++ A    I
Sbjct: 248 AGAMAT---FDNTRPLVAGMAVGLARAALEEVRSLLDAAGVEIDYDRPAQSQSYAAATFI 304

Query: 363 AL--DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           A+  D  AA  L+   A   D  K  S EA+       ++K    ++   +    +E  G
Sbjct: 305 AMEADWEAALLLTLEAAWLADNRKPNSMEAS-------MSKAKAGRVGNDITLRCVELAG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
             GY E   + +  R+S    I  G+
Sbjct: 358 TLGYSETSFLEKWSRDSKILDIFEGT 383


>gi|213964936|ref|ZP_03393135.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
 gi|213952472|gb|EEB63855.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
          Length = 389

 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 57/292 (19%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252
           G GLTE   G+D  A  +  ++  D  + ++G K F+++  +D  + + +  V G+    
Sbjct: 129 GFGLTEPDAGSDAGATRTTAREDGDD-FIINGAKQFITNSGTDITSLVTVTAVTGQKEDG 187

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
              +   +VP   E     G   +   +K+G  ++ T  L F++       LLG      
Sbjct: 188 KKEISTIIVPSGTE-----GFVAEPAYDKVGWNASDTHPLTFTDVRVPQENLLG--TRGR 240

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    + IL    +  A ++    +  + E++ +A+ RH           M RAI +   
Sbjct: 241 GFANFLSILAEGRVAIAALATGAAQGCVDESVRHAKERHS----------MGRAIGEY-- 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYA------------RIMAPITKYWCCKMAPAVI 412
                 A+SF++A    EA++ +   A+             R  A I K    + A    
Sbjct: 289 -----QAVSFKIARM--EARAHAARMAWYDAAAKMAAGADFRREAYIAKMIASEAAMDNA 341

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +A +  GG G++ E  +ARHYR+S    + +G G   V   L L+ +G  L
Sbjct: 342 RDATQIFGGYGFMNEYRVARHYRDSKI--LEIGEGTTEVQ--LMLIARGLGL 389


>gi|114656355|ref|XP_001142715.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 3 [Pan
           troglodytes]
          Length = 484

 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 35/259 (13%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +       +LG  N     +     L  L  A   +  M+  L   I Y   
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 308

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   +      
Sbjct: 309 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 362

Query: 402 YWCCKMAPAVIAEAMECIG 420
            +  + A  V  + ++C G
Sbjct: 363 -YSAECATQVALDGIQCFG 380


>gi|85710663|ref|ZP_01041727.1| putative acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687841|gb|EAQ27846.1| putative acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 380

 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 15/258 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           LG++E   G+D++ I +  +K  D  Y ++G K W  +   +D   +LA  +   G    
Sbjct: 123 LGVSEPSAGSDVSGIRTTARKDGDD-YIINGTKMWTTNGTQADWMCLLAITDPEGGVHHN 181

Query: 259 PRLL--EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
             L+     +P      R K K+G  S+ T ++ F +       L+G+            
Sbjct: 182 KSLICVPMDTPGISTAPRFK-KLGMHSSDTTQVFFEDVRVPQANLIGEEGKGFAYQMSQF 240

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  L +    +  M   +A    YA  R + G  +ID   +   +A++  ++    +L+
Sbjct: 241 QIERLWAGAAGLRSMENLIAATREYAAGRKLFGQSVIDFQSVAFRLAELETEVELLRSLT 300

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A    E     E+      +A + K    +++  V    ++  GG GY+ +  +AR 
Sbjct: 301 YRAA----ELHIAGEDVTR---LATMVKLKAGRLSREVSDACLQYWGGMGYMWDSPVARS 353

Query: 434 YRESPANSILLGSGNAMV 451
           YR+S   SI  G+   M+
Sbjct: 354 YRDSRLGSIGGGADEVML 371


>gi|12667042|emb|CAC28157.1| putative acyl-CoA dehydrogenase [Thauera aromatica]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 20/271 (7%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           REY P   +     + A    L+E   G+D+AA+     ++    Y L G K W  +  +
Sbjct: 114 REYLPRVASGQALAAFA----LSEPGSGSDVAAMACSA-RLDGEYYVLDGEKSWISNGGI 168

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
           +D +++ A+     G   +   + D    GL        I     A   L F++      
Sbjct: 169 ADFYVVFARTGEAPGARGLSAFIVDADTPGLEIAERIEVIAPHPLA--RLRFTDCRVHKS 226

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVM 355
            +LG   +    V    + I+  S   +  G  R +L EA+  A  R +    L D  + 
Sbjct: 227 AMLGTPGLGF-KVAMQTLDIFRTSVAAAALGFSRRALDEALRRATTREMFQQKLADFQIT 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A +A  +  +  L++R A   D+    + EAA A++ A        + A  VI  A
Sbjct: 286 QVKLAQMATSVDISALLTYRAAWRRDQGHKVTREAAMAKMTA-------TESAQQVIDSA 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++  GG G +    +   YRE  A  I  G+
Sbjct: 339 VQIWGGCGVVSNHPVELLYREIRALRIYEGA 369


>gi|328850726|gb|EGF99887.1| hypothetical protein MELLADRAFT_73307 [Melampsora larici-populina
           98AG31]
          Length = 532

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 17/265 (6%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGC 255
           I L ++E   G+D+A +     K  DG  Y ++G  KW  +   +D F    + +  +  
Sbjct: 263 IALAISEAFAGSDVAGLRCTAVKTPDGKHYIVNGTKKWITNGTFADYFSTGVRTDKGLSM 322

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L+ R        G+  + +K    + +  T  + F N        L V    ++ +   
Sbjct: 323 LLIER------GEGVETKPIKTSY-SPAAGTAYISFDNVKVPATNLLGVENKGLQVILSN 375

Query: 316 IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
              +  IM    +R S     E + +A +R V G  LI+QPV+++  A +     A  + 
Sbjct: 376 FNHERWIMCCGVIRASRFVTEECLKWAHQRKVFGKPLINQPVIRQKFAQMFAKCEATQSW 435

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    ++  S +E+A        + K +  ++A  V  EA++  GG G I    + R
Sbjct: 436 LEHVTYQMNKM-SYAEQADLLAGQIGLLKAYSTRVAHEVADEAVQIFGGRG-ISATGMGR 493

Query: 433 H---YRESPANSILLGSGNAMVLDV 454
               ++ S     +LG    ++ D+
Sbjct: 494 FVEMFQRSYKFDAVLGGSEEILFDL 518


>gi|111023362|ref|YP_706334.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822892|gb|ABG98176.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 468

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 226 YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  + ++  S+ FI+ A+++G+   F+V     +    GL  +     +G R+ 
Sbjct: 252 YKLNGVKSLVPAAASSELFIVAAELDGKPSFFIV-----EADTKGLVVE-ADPSMGLRAA 305

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVE--DMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
               L  ++       LLGD +      E  D   L  L  A ++V   +  L   I Y 
Sbjct: 306 GLGRLNLTDVAVPESGLLGDADADVRKTEYADAIRLARLGWASLAVGTGQAVLDYVIPYV 365

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + ++  +   +A+I +++     ++ R A+  ++  S + E+A AR +A  
Sbjct: 366 NERVAFGEPISNRQAVAFMVANIGIELDGLRLVTLRGASRAEQGLSFARESALARKLA-- 423

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 +    +  + ++ +GG GY +E  + R YR+
Sbjct: 424 -----SEKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 455


>gi|302549774|ref|ZP_07302116.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467392|gb|EFL30485.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 402

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L +A +++ GM   L +       R + GG L +       +AD+A ++AAA  L    A
Sbjct: 251 LVAATLALGGMDRCLEDTRRCLTERRLFGGTLSELQAPAHRVADLATELAAARQLVHHTA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +++    + E + A++    T    C+MA A    +++  G  GY++    +R YR++
Sbjct: 311 WLYEQGDLPATECSMAKLH---TTELACRMADA----SLQLQGAHGYLDSSDASRAYRDA 363

Query: 438 PANSILLGSGNAM 450
            A ++  G    M
Sbjct: 364 RAATLAAGPSEVM 376


>gi|158296551|ref|XP_316942.3| AGAP008501-PA [Anopheles gambiae str. PEST]
 gi|157014764|gb|EAA12875.3| AGAP008501-PA [Anopheles gambiae str. PEST]
          Length = 415

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 17/240 (7%)

Query: 200 LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256
            GLTE   G+D +++ ++         Y LSG K W  +SP++D  I+  + E G+V  F
Sbjct: 155 FGLTEPNHGSDPSSMETRAVHDPKTKTYVLSGSKTWITNSPIADICIVWGKTEDGKVRGF 214

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMK 313
           +V R  E G   GL   R++ K   R++AT  +   E       LL +++   GP   + 
Sbjct: 215 IVDRA-ESGE--GLATPRIEGKFSLRASATGMILMDEVRIPEDNLLPNVSGMRGPFGCLN 271

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              Y   A  ++      L  A  Y   R      L    +M++ +AD+  +I+   A  
Sbjct: 272 NARY-GIAWGALGAAESCLKVARGYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLAAC 330

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             +    D+     E       M  + K      A  +   A + +GG+G  +E  I RH
Sbjct: 331 LHVGRLKDQKLHTPE-------MISMLKRNNAGKALDIARVARDMLGGNGIADEYHIIRH 383


>gi|148657017|ref|YP_001277222.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569127|gb|ABQ91272.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 545

 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 25/265 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGI---YCLSGHK-WFLSSPMSDAFIMLAQVEGR 252
           +  G TE + G+D+A +T++   +  DG    Y +SG K W  +  ++  + +LA   G 
Sbjct: 124 VAYGATEPQAGSDLATLTTKAVPVVEDGKVIGYKISGRKQWISNGGVAKIYTILANAPGG 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F+V    E  +P G    + ++K G R++ T  L     F     L+G +    G  
Sbjct: 184 ISWFIV----EHDAP-GFTKGKPEDKHGIRASNTAALFLDEVFVPADRLVGGVE-GKGLA 237

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVM--KRAIADIALD 365
           +   +  Y    + S  +     ++  AI YA+ R   G  L  Q  +  K  + ++A  
Sbjct: 238 QAAAVFGYTRLMVGSFGLGAGWEAMRRAIRYAQTRIQGGKPLSQQQGLTHKLIVPNVARL 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA   + + +A + D    + +          + KY   +       +A++  GG GY 
Sbjct: 298 EAARHYIEW-VAETIDGGNDQQQ------TEGAVAKYMATEAGNKAAEDAIQVHGGYGYT 350

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
           +E  + +  R+     I  G+   M
Sbjct: 351 KEYMVEKIKRDVRITCIYEGTSEIM 375


>gi|157107100|ref|XP_001649622.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108868733|gb|EAT32958.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 421

 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 59/286 (20%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           D+  +   ++Y P     M K  +    GLTE   G+D +++ ++         Y L+G 
Sbjct: 138 DYGSEEQKQKYLPK----MAKGELIGCFGLTEPNHGSDPSSMETRAVHDPRTKTYVLTGS 193

Query: 232 K-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K W  +SP++D  I+  + E GRV  F+V R   + S  GL   +++ K   R++ T   
Sbjct: 194 KTWITNSPVADVCIVWGKTEDGRVRGFIVDR---EQSSTGLSTPKIQGKFSLRASDT--- 247

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR-----------------VSL 332
                 G +L D           ++ I  D+ + +VSGMR                 +  
Sbjct: 248 ------GMILMD-----------EVRIPEDNILPNVSGMRGPFGCLNNARYGIAWGALGA 290

Query: 333 AEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE+     R++        +P+     M++ +AD+  +I+        +    D+     
Sbjct: 291 AESCLKVARQYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLTACLHVGRLKDQKLHTP 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           E       M  + K      A  +   A + +GG+G  +E  I RH
Sbjct: 351 E-------MISMLKRNNAGKALEIARVARDMLGGNGIADEYHIIRH 389


>gi|299533654|ref|ZP_07047028.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718376|gb|EFI59359.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 32/268 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D  A  +   +  D  Y L+G K F++ +P++D F ++A+   +GR    L 
Sbjct: 124 LTEPEAGSDATAQKTVAVRDGDD-YVLTGKKCFITNAPIADLFTVVARTDPQGRGANGLT 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             L+E G+P        + K+G   +   E+        LL  + V    +         
Sbjct: 183 AFLIERGTPGLTTPTPPR-KMGQHGSPVGEV--------LLDSVRVHKSAIVGELEGQGF 233

Query: 319 DSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +A+ +++  R++LA            E    A  R  SG  + +  ++++ IA+  +++
Sbjct: 234 RTAMRALNKQRINLAGLCIGPAIRLVDEMARRALSRRQSGQPIAEFQLVQQLIAESNMEV 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL    A   D  +  + EA+       + K +  +M   V   A++  GG GY+ 
Sbjct: 294 HAARALLMETARKRDAGQDVTMEAS-------MCKLFASEMCGRVADRAVQLFGGQGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454
                R YR+     I  G+    + ++
Sbjct: 347 GNVAERFYRDVRVFRIYEGTSQVHIGNI 374


>gi|149917987|ref|ZP_01906481.1| acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149821253|gb|EDM80657.1| acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 387

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 53/269 (19%), Positives = 102/269 (37%), Gaps = 37/269 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
           +G++E   G+D+A+  +  ++  D      G  W  +   +D    L   VEG       
Sbjct: 123 IGVSEVGAGSDVASTKTHARRDGDDFVINGGKMWITNGFQADWMCTLVNTVEGVAPHKSK 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306
             ++      G+      +K+G R++ T ++ F +             FGF+   +    
Sbjct: 183 SLVIIPMDAKGVDRSTKLDKLGMRASDTAQIFFEDVRVPQRYVIGQEGFGFVYQMMQFQE 242

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L  A  SV  +   L   + Y R+R   G  ++D   +   +A++  ++
Sbjct: 243 E---------RLWGAANSVRSIERMLEMTVEYTRQRKAFGQSILDNQWVHFKLAELETEL 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGS 422
            A  AL +R    +   K  ++ A+  ++    +      WC +             GG 
Sbjct: 294 EALRALVYRATELYVSGKDVTKLASMCKLKSGRLCREVGDWCVQFH-----------GGM 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451
           GY+ E  I R YR++   +I  G+   M+
Sbjct: 343 GYMMETPINRAYRDARLVAIGGGADEIMM 371


>gi|74199785|dbj|BAE20728.1| unnamed protein product [Mus musculus]
          Length = 340

 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255
           L+E   G+D  A+ ++  K S   Y L+G K W   +  ++ F++ A V+   G     C
Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           FLV R  E     G    + +NK+G R+++T +L F N 
Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV 268


>gi|302541931|ref|ZP_07294273.1| putative acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459549|gb|EFL22642.1| putative acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC
           53653]
          Length = 381

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA++ +  +   G + L+G K W  ++P +D   + A+     G   V  
Sbjct: 128 LSEPDAGSDAAALSLRADRDGAGGWRLTGEKCWISNAPGADVTTVFARTTPGAGSRGVTA 187

Query: 261 LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            L      GL  + L+    + IG      V +   +  G       V+      M+ L 
Sbjct: 188 FLVPADRPGLGGEPLEMLSPHPIGRLVFDGVPVTAEDVLGVPDAGFRVA------MRTLN 241

Query: 317 YLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            L  ++   +V   + +L  ++ +A  R   GG L D   +   +A++A    AA  L +
Sbjct: 242 LLRPSVGAFAVGMAQAALDASLAHAGSRTAFGGPLKDLQSVAHQLAEMATRTEAARLLVY 301

Query: 375 RLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMA 408
             A+++DE A   +  +A A+++A  T  +    A
Sbjct: 302 AAASAYDEGAPGITRHSAMAKLLATETAQYVVDAA 336


>gi|300784175|ref|YP_003764466.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793689|gb|ADJ44064.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 390

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 10/103 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P   T  A+G  GLTE   G+D  ++ +  + + DG  + LSG K W  +  ++D  ++ 
Sbjct: 124 PRMATGEALGCFGLTEPDAGSDPGSMRT--RAVRDGSDWVLSGTKMWITNGTVADVAVVW 181

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           AQ +  +  F+VP      S  G     +K+K+  R++ T EL
Sbjct: 182 AQTDDGIRGFVVPT-----STPGFTANEVKHKLSLRASLTAEL 219


>gi|290474775|ref|YP_003467655.1| acyl coenzyme A dehydrogenase [Xenorhabdus bovienii SS-2004]
 gi|289174088|emb|CBJ80875.1| acyl coenzyme A dehydrogenase [Xenorhabdus bovienii SS-2004]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 24/261 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFL 257
           + +TE  GG++ A I +  ++  D  Y ++G K ++++ ++   I++A    +G+ G  +
Sbjct: 122 IAMTEPGGGSNTADIKTVAKRQGDH-YLVNGGKTYITNGINADLIVVAVKTEQGQQGQGI 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
              ++E     G        KIG   + T EL F +       L+G  N+          
Sbjct: 181 SLLVIERDMA-GFSRGEPMKKIGWNGSDTAELFFHDCKVPVTNLIGRENLGN-------- 231

Query: 315 LIYLDSAI----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             Y  SA+    +S+S + V+ AE I  +   +V      DQP+         L   A  
Sbjct: 232 -YYFMSAMPRERLSISAVAVASAEHILQSTLAYVKERKAFDQPIGSFQYNRFIL---AQL 287

Query: 371 ALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
               ++A  + D A  +  +  ++ + A   K+W  ++   V    ++  GG+GY+ +  
Sbjct: 288 DTEVKIARIYLDNAVEQFSKGLFSLVDAARIKWWTTELQMKVADRCLQLYGGAGYMRDSV 347

Query: 430 IARHYRESPANSILLGSGNAM 450
             +++  S A +I  G+   +
Sbjct: 348 AGKNWLNSRAQTIYGGTSEVL 368


>gi|257093258|ref|YP_003166899.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045782|gb|ACV34970.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 59/242 (24%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  F+V   L D   NGL  + 
Sbjct: 146 YRVNGQKVWISRVQHSDLMILLARTTPFGEVKKKSEG-MSIFIVD--LHDAVGNGLSVRP 202

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F +LL  LN         + LI    
Sbjct: 203 IANMVNHETN---ELFFDNLEIPTENLIGEEGQGFRYLLDGLNAE-------RTLI---- 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFR 375
           A   +      +  A  YA+ R     I+ D+P+     ++  IAD  ++I AA  + F+
Sbjct: 249 AAECIGDGYWFVERASRYAKER-----IVFDRPIGQNQGVQFPIADAFIEIEAANLMRFK 303

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
               FD  +    EA  A       KY   K +       ++  GG G+  E  I R +R
Sbjct: 304 ACALFDAQQPCGAEANMA-------KYLAAKASWEAANVCLQTHGGFGFANEYDIERKFR 356

Query: 436 ES 437
           E+
Sbjct: 357 ET 358


>gi|254282994|ref|ZP_04957962.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
 gi|219679197|gb|EED35546.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
          Length = 391

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 118/265 (44%), Gaps = 24/265 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF 256
           + + +TE   G+D+A I +   +  D  + L+G K ++S+ + +D  I+ A+ + +   +
Sbjct: 122 LAIAMTEPDAGSDLAGIRTSATEHPDH-WVLNGQKTYISNGINADVVIVAAKTKPQQDPY 180

Query: 257 -LVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            L   ++E G P    ++R +N  K+G ++  T EL F+     ++    V   P     
Sbjct: 181 HLTLFIVERGMPG---FERGRNLKKMGMKAQDTAELFFNEV---VVPKDQVLGEPGRGFA 234

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            L+       L  A+  ++  ++S      + R R   G  +      + A+A++  ++ 
Sbjct: 235 YLMEGLAEERLIGAVAYLASAQLSWDLTADFVRSRKAFGKAVASFQNTQFALAELRTELD 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A     +   +F+     + +AA +++M    +     +        ++  GG+GY++E
Sbjct: 295 VAQCYIDQQVAAFNAGCLTAVDAAKSKLMTSELQVKAADIG-------VQLHGGAGYMDE 347

Query: 428 RSIARHYRESPANSILLGSGNAMVL 452
             I+R + ++  + I  G+   M L
Sbjct: 348 YPISRQFTDARISPIYAGTSEIMKL 372


>gi|157136755|ref|XP_001663829.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108869864|gb|EAT34089.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 421

 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 59/286 (20%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           D+  +   ++Y P     M K  +    GLTE   G+D +++ ++         Y L+G 
Sbjct: 138 DYGSEEQKQKYLPK----MAKGELIGCFGLTEPNHGSDPSSMETRAVHDPRTKTYVLTGS 193

Query: 232 K-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K W  +SP++D  I+  + E GRV  F+V R   + S  GL   +++ K   R++ T   
Sbjct: 194 KTWITNSPVADVCIVWGKTEDGRVRGFIVDR---EQSSTGLSTPKIQGKFSLRASDT--- 247

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR-----------------VSL 332
                 G +L D           ++ I  D+ + +VSGMR                 +  
Sbjct: 248 ------GMILMD-----------EVRIPEDNILPNVSGMRGPFGCLNNARYGIAWGALGA 290

Query: 333 AEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE+     R++        +P+     M++ +AD+  +I+        +    D+     
Sbjct: 291 AESCLKVARQYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLTACLHVGRLKDQKLHTP 350

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           E       M  + K      A  +   A + +GG+G  +E  I RH
Sbjct: 351 E-------MISMLKRNNAGKALEIARVARDMLGGNGIADEYHIIRH 389


>gi|312116097|ref|YP_004013693.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221226|gb|ADP72594.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 382

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 150/355 (42%), Gaps = 37/355 (10%)

Query: 118 SIWD--RSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVALMT 166
           ++WD  +S    V K+A  +  A +Y         + +L+A  +    S+   S+ A ++
Sbjct: 29  AVWDENKSLPLDVLKEAGSLGFAAIYAGEEHGGTGLTRLDAALVFEGLSLGCPSIAAFLS 88

Query: 167 TPRVHK--DWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +H    W    F  E       P + K        LTE   G+D AA+ +   +  D
Sbjct: 89  ---IHNMCTWMIDAFGSEEHRARWIPKLAKMDAVASYCLTEPGCGSDAAALRTTAARDGD 145

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            +  L+G K F+S + +SD ++++ +        +   L+E G+P GL +   + K+G  
Sbjct: 146 ELV-LNGAKAFISGAGLSDLYVVMCRTGAPGPSGISAVLVEKGTP-GLSFGANEKKMGWN 203

Query: 283 SNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +  T  ++F       SN  G        +   +   ++ I    A  ++   + +L +A
Sbjct: 204 AQPTAAVQFDDCRVPASNLLGVEGDGFKYAMQGLNGGRLNI----AACALGAAQTALDKA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           ++Y+  R   G  L     ++  +AD+ + +  A     + A   D+   ++ +AA    
Sbjct: 260 LNYSGERKAFGKTLDQFQALQFKLADMEIALQVARCFLRQAAWKLDQ---KTADAAKFCA 316

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           MA   K +    A  V  EA++  GG GY+ +  + +  R+   + IL G+   M
Sbjct: 317 MA---KCFVTDAAFDVADEALQIHGGYGYLADYGLEKIVRDLRVHRILEGTNEIM 368


>gi|260462349|ref|ZP_05810557.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031843|gb|EEW33111.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 387

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+ ++  + +K +D  Y L+G K W  + P ++  ++ A+ +       +
Sbjct: 128 LAMSESGAGSDVVSLKLRAEKRND-RYVLNGTKMWITNGPDAETLVVYAKTDPERKSRGI 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + + +  G    +  +K+G R + T EL F +        L+     VE +   +  
Sbjct: 187 TAFIVEKAMAGFSVAQKLDKLGMRGSNTGELVFEDVEVPFDNVLHEEGRGVEVLMSGLDY 246

Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  +++   +  M   L  AI Y   R   G  + +  +++  +AD+   + AA A  + 
Sbjct: 247 ERTVLAGGPIGLMAACLDVAIPYVHERKQFGQAIGEFQLVQGKLADMYTTMNAARAYVYA 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A + D  ++  ++AA   + A        + A  +  +A++ +GG+GYI +    R  R
Sbjct: 307 VAAACDRGQTTRKDAAGCVLFA-------AEKATQMALDALQLLGGNGYINDYPTGRLLR 359

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 360 DAKLYEIGAGT 370


>gi|255318553|ref|ZP_05359786.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262378779|ref|ZP_06071936.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304545|gb|EET83729.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262300064|gb|EEY87976.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  F+V   +++   +G+  Q 
Sbjct: 146 YVINGQKVWISRVQHSDWMILLARTTPLAEVKKKSEG-MSIFMVD--IKEAMKSGMAVQP 202

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 203 IPNMVNHETN---ELFFENLEIPEENLIGEEGKGFKYILDGLNAE-------RTLI---- 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +      +  A  Y + R V G  +     ++  +A+  ++I AA  + FR    F
Sbjct: 249 AAECIGDGYWFMDRATKYVKDREVFGRPIGQNQGVQFPLAESFIEIEAANLMRFRACELF 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D  +S   EA  A       KY   K +       ++  GG G+  E  I R +RE+
Sbjct: 309 DHGQSCGAEANMA-------KYLAAKSSWEAANHCLQFHGGFGFANEYDIERKFRET 358


>gi|221068327|ref|ZP_03544432.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220713350|gb|EED68718.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 393

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 142/367 (38%), Gaps = 53/367 (14%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L A   G E  D+      +  L+R+   DG     W + F         +  +A  
Sbjct: 25  TPELKARMRGAEGGDE------YRELIRKMGRDGWLAIGWPKEF-------GGQGLSATE 71

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            L+   EA    +P       V + T      ++  +   +E+ P     M    +   +
Sbjct: 72  QLIFFEEANIAGAP----LPFVTISTVGPALMEYGTEAQKQEFLPG----MASGDIIFAI 123

Query: 201 GLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G +E   G+D+A + +Q Q   D   G + ++G K + S   S  ++ LA    R    L
Sbjct: 124 GYSEPGAGSDLAMLKTQAQLQGDLQTGHFVVNGQKLWTSGIESADYVWLA---ARTDPEL 180

Query: 258 -----VPRLLEDGSPNGLCYQRLKNKIGNRSNAT----VELEFSNTFGFLLGDLNVSTGP 308
                +  ++ D    G  +  L   +GN + AT    VE+  +   G L G   + T  
Sbjct: 181 ARHKGISIMVVDARDKGFSHT-LIQTVGNYTAATYFDNVEVPAARLIGQLNGGWKLITAQ 239

Query: 309 V--EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           +  E + +  + D             A+ + +A+ R   G   +DQ  ++R++A+    +
Sbjct: 240 LNHERLGLGAWSDKVFGP-------FAKVLQWAKARDEQGRRAVDQAWVRRSLAECYARL 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A    +FR+A S        E  A    +A  TK +  +    V+   M+ +G S  + 
Sbjct: 293 EAMRLTNFRIAASL-------EAGAMDVSLASATKVYGSEGVVEVLHRLMDIVGSSALVR 345

Query: 427 ERSIARH 433
             S A +
Sbjct: 346 GGSAASY 352


>gi|91788432|ref|YP_549384.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91697657|gb|ABE44486.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 627

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 118/298 (39%), Gaps = 53/298 (17%)

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF----------SNTFGFLL 299
           +G V   L PR       N +    L +K+G R      L F          +   G+L+
Sbjct: 260 KGSVKVTLGPR-------NDVALAGLNHKLGWRGTINTLLNFGEGKYPVNGEAGAIGYLV 312

Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G     L      + + +I +   + ++ ++G   SL  A +  + R V  G        
Sbjct: 313 GKPHEGLRCMFHMMNEARIGVGTAATMLGMAGYYASLDYAKNRPQGRPVGPGGKDAAQPQ 372

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITK 401
             +I+   +KR +         A AL    A   DE  +   +AA        ++ PI K
Sbjct: 373 IRIIEHADVKRMLLAQKAYCEGALALELYCARLVDEHHTGEPQAADDARLLLEVLTPIAK 432

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LL 458
            W  +      + A++  GG GY  +  + +++R++  N I  G+     +D+L    L+
Sbjct: 433 SWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVLM 492

Query: 459 EKGTN---LFEQLFSTLE------------QDLGSSGKKVITILRDSISLCKEDKGLA 501
           E G     L E++ +T+E            Q LG++ ++V +  R + +  K  + LA
Sbjct: 493 EGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQQVESATRAAWASGKAGEALA 550


>gi|83816198|ref|YP_445243.1| acyl-CoA dehydrogenase domain-containing protein [Salinibacter
           ruber DSM 13855]
 gi|83757592|gb|ABC45705.1| Acyl-CoA dehydrogenase, C-terminal domain family [Salinibacter
           ruber DSM 13855]
          Length = 398

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 20/250 (8%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G++ A + ++ ++  DG + + GHK W  ++ ++D  ++ A
Sbjct: 131 PALANGEAIGCFGLTEPDVGSNPAEMKTRARRDGDG-WVIDGHKRWSTNATIADVAVIWA 189

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           + E   V  FLV     +   +G+    + +    R+  T E+   +        L +++
Sbjct: 190 KDEDDTVRGFLV-----ETDRDGVETPPIDDSWSLRAAVTSEVVLDDVRVPDAARLPEVS 244

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              GP+  +    Y      ++         A  +A+ R   GG +    +M+  + D+ 
Sbjct: 245 GLKGPLSCLTQARY-GICWGTIGAAMACFDTARQHAQNREQFGGPIGRFQLMQERLVDMV 303

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I  A  L++RL    +    R ++ + A       K   C+ A  V   A + +GG+G
Sbjct: 304 QEITKAQLLNWRLGTLKEAGTMRPQQVSLA-------KRNNCQTALDVARSARQVLGGNG 356

Query: 424 YIEERSIARH 433
                 + RH
Sbjct: 357 VTSMYPVMRH 366


>gi|331236165|ref|XP_003330742.1| glutaryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309309732|gb|EFP86323.1| glutaryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 429

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E   +   P   +   IG  GLTE   G+D + + ++  +   G Y LSG K W  +
Sbjct: 149 FGSEEQKSKFLPELASGNMIGCFGLTEPGHGSDPSGMLTRATEDPSGGYILSGSKTWITN 208

Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +P++D F++ A+   + ++  F    +LE G   GL   ++++K+  R++AT
Sbjct: 209 APIADVFVVWAKCDWDQKIRGF----ILEKGM-KGLSAPKIEHKLSLRASAT 255


>gi|257791587|ref|YP_003182193.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317488000|ref|ZP_07946582.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475484|gb|ACV55804.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912902|gb|EFV34429.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 126/309 (40%), Gaps = 45/309 (14%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M A++ T  V +   P+  S   D  NK+     S+A    L+E   G+D  A+++  ++
Sbjct: 88  MTAMLATADVAEFGTPEQVSLVVDQYNKSGKPIASLA----LSEPGAGSDNKAMSTYTKR 143

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             DG Y ++G K ++++  +  ++++       A     +  +L+P         GL   
Sbjct: 144 QDDGTYIMNGQKTWVTNGGNTPYMLVVSKDEHPAHANESMSLWLIPT-----DAPGLSTA 198

Query: 274 RLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYLDSA 321
            L +KIG +    V++ F                GFLL   N      E  + L+    A
Sbjct: 199 PL-DKIGQQIIPFVDVFFDEVRLTEDMRLGKEGEGFLLLMKN-----FEIERCLV----A 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  + +A  YA  R+  G  +   P+++  +A++   +  +  + ++     D
Sbjct: 249 AQSLGLAQACMDDAAAYANERYAFGKPIGWNPMIQDMLAEMETILENSRNMLYKTLWQLD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +S   EAA  +  A +    C K+A      A+E     GY     + R + +   N 
Sbjct: 309 QGESVRTEAALLKRYATVG---CTKVADM----ALEIFAALGYTTASRVGRIWTDLRGNQ 361

Query: 442 ILLGSGNAM 450
           +  G+   M
Sbjct: 362 LAGGTVEIM 370


>gi|225555592|gb|EEH03883.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 442

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 27/257 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------- 249
           +  G+TE   G +   + ++  +  D  Y +SG K W  S+ ++   ++LA+        
Sbjct: 166 VCFGVTEPNTGLETLKLRTEAIRDGDS-YRVSGQKIWISSAQVARRMVLLARTTPLEEVK 224

Query: 250 ---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
              EG +  F +     D    GL  +++K K+G R+    E+ F N +      L    
Sbjct: 225 KPSEG-LSLFFIDF---DKDAPGLELRKIK-KMGGRAVDANEVFFDN-YRIPADSLIGRE 278

Query: 307 GPVEDMKILIY-LDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           G  +  KI+++ +++    ++G       V+L +A  YA+ R V G  +     +   +A
Sbjct: 279 G--DGFKIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERIVFGRPIGQNQAIAHPLA 336

Query: 361 DIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           D  +++ AA   ++   N +D +K+ +S       +     KY   + A      A+   
Sbjct: 337 DAYMNLEAAKLATYHATNLYDASKTDKSITQKAVGVACNSAKYLAAEAAFTACERAVLTH 396

Query: 420 GGSGYIEERSIARHYRE 436
           GG GY +E ++ R+ RE
Sbjct: 397 GGMGYAQEYNVERYLRE 413


>gi|327480313|gb|AEA83623.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 395

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +   NGL  Q 
Sbjct: 155 YVINGQKVWISRIQHSDLMILLARTTPLAEVQRKSEG-MSIFLVD--LREAIGNGLTVQP 211

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 212 IANMVNHETN---ELFFDNLEIPASSLIGEEGKGFRYILDGLNAE-------RTLI---- 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + ++  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 258 AAECIGDGRWFVEKSAQYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D  ++    A  A       KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 318 DAGRNAGAAANMA-------KYLAAKASWEAANACLQTHGGFGFANEYDVERKFRET 367


>gi|257056997|ref|YP_003134829.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586869|gb|ACU98002.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 442

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 23/255 (9%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
           A  L L E+    D+ A  +  ++  +G Y + G K  +  +  ++ F++ A +EGR   
Sbjct: 201 AAALALQERAPLFDVFAPKTTAKRTPNG-YRIDGVKNLVPRAAKAELFVVSANLEGRGPA 259

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVE 310
             V     + S  G+  +  +  +G R   T +L   N       LLG  + +V T  V 
Sbjct: 260 LFV----VESSSKGVSIE-AEPAMGLRGAETGKLVLDNVSLPASALLGGGERDVFTDVVR 314

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +    L  A ++    +  L   I Y   R   G  +  +  +   +ADI +++    
Sbjct: 315 SSR----LAWAALACGTAKAVLDYVIPYVNEREAFGEPISHRQGVAFQVADIGIELEGMR 370

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  R A+  ++ K  + E A AR +A     W            ++ +GG G+I+E  +
Sbjct: 371 LVMLRAASRAEQGKPYAREVALARKLATDKGMWIGSTG-------VQLLGGHGFIKEHPV 423

Query: 431 ARHYRESPANSILLG 445
            R YR+  A  ++ G
Sbjct: 424 ERWYRDLRAIGVMEG 438


>gi|331698985|ref|YP_004335224.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953674|gb|AEA27371.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 383

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 27/261 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---- 252
           I   L+E+  G+D A++ ++ ++  D  + L G K W  ++  S  + ++A  +      
Sbjct: 124 ISYALSEREAGSDAASMRTRARRDGDD-WILDGTKCWITNAGESTWYTVMAVTDPEKRAN 182

Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F V R        G      + K+G   + T E+ F      + GD  +       
Sbjct: 183 GISAFAVHR-----DDPGFEVGPKERKLGIAGSPTREIYFQGCR--IPGDRIIGAEGTGF 235

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              L  LD    ++    V +A+     AI YA+ R   G  + +   ++  +AD+A+ +
Sbjct: 236 KTALRTLDHTRPTIGAQAVGIAQGALDVAIAYAKDRRQFGKAIAEFQGLQFMLADMAMKV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA  L +        A SR+E        ++   K     +A +V  +A++ +GG+GY 
Sbjct: 296 EAARQLVY-------VAASRAERGEPNLGFISSAAKCMASDVAMSVTTDAVQVLGGAGYT 348

Query: 426 EERSIARHYRESPANSILLGS 446
            +  + R  R++    I  G+
Sbjct: 349 RDFPVERMMRDAKITQIYEGT 369


>gi|315655837|ref|ZP_07908735.1| carbohydrate kinase FGGY [Mobiluncus curtisii ATCC 51333]
 gi|315489901|gb|EFU79528.1| carbohydrate kinase FGGY [Mobiluncus curtisii ATCC 51333]
          Length = 535

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           S+ D +   +W R  EP +  + HK    + YL+A+L    +M  SV SA    L+    
Sbjct: 141 SVKDPMWKYLWVRDNEPEIYAKVHKWLDVKEYLIARLTGCFVM--SVDSAFATLLLDVRA 198

Query: 170 VHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTE 204
            H  WA ++  S   +P + AP+  ++ A+G  L E
Sbjct: 199 SHPAWASRLAQSFGVNPRHLAPIVTSATAVGTLLPE 234


>gi|309790696|ref|ZP_07685247.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
 gi|308227290|gb|EFO80967.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
          Length = 424

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 41/280 (14%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFL 235
           +F  E    +  P      AIG   LTE   G+  AA  +   +     + ++G  KW  
Sbjct: 142 MFGSEAQKAHWLPQMSRFEAIGAWSLTEPDVGSATAAGLTTTARREGDTWVINGAKKWSG 201

Query: 236 SSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELEF 291
           ++P +D  ++ A+   + +V  FL+ R    G+P GL  ++L  KI  R   NA + LE 
Sbjct: 202 NAPFADIHVVWARDLADQQVKGFLIER----GTP-GLHVEKLPGKIALRVVQNADIHLEN 256

Query: 292 -----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYA 339
                      +++F  +   L V+ G V              +++G+ +   E A+ YA
Sbjct: 257 CRVPERNRLPNAHSFRDVARQLAVARGGVA------------WAMTGVAMGAYEHALAYA 304

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +    +++  +  +  ++ A   L  R+A    + ++R    +  R  A +
Sbjct: 305 NQRQQFGQPIAGFQMIQNNLVQMLANVTAMQVLCTRMA----QLQTRDGRISQER--ASL 358

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            K +C +     +A A   +GG+G + E  +AR + ++ A
Sbjct: 359 AKMFCGEKMRETVALARGVLGGNGILLEHHVARFFADAEA 398


>gi|290997840|ref|XP_002681489.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
 gi|284095113|gb|EFC48745.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
          Length = 431

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 42/263 (15%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246
           P   T   IG  GLTE   G+D +++ ++ +    G  Y L+G K W  +SP++D F++ 
Sbjct: 161 PKLATGELIGCFGLTEPNHGSDPSSMETKAKLSQCGKYYILNGSKMWITNSPIADIFVVW 220

Query: 247 AQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+    EG++  F++ + ++     GL   +++ K+  R++ T  +         + D++
Sbjct: 221 ARSEAHEGKIKGFILEKGMK-----GLTAPKIEGKMSLRASITGSIG--------MDDVH 267

Query: 304 VSTGPVEDM--------KILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVS----GGILI 350
           V   PVE++             L+SA   ++   +  AE   H AR+  +     G  L 
Sbjct: 268 V---PVENLLPHASGLGGPFSCLNSARYGIAWGALGAAEYCFHTARQYQIDRKQFGRPLA 324

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++ +AD+  +I+       +L    D+ +       +A  M  + K      A  
Sbjct: 325 QNQLPQKKMADMLTEISLGLVSCVQLGRLKDKGE-------WAPEMISMLKRNNAGKALE 377

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +     + +GG+G  +E  I RH
Sbjct: 378 IARVCRDMLGGNGIADEYHIIRH 400


>gi|284164232|ref|YP_003402511.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013887|gb|ADB59838.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 430

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 44/276 (15%)

Query: 190 PMQKTSVAIGLGLTE--KRGGTDIAAITSQGQKIS---------------DGI-YCLSGH 231
           P+ +  +A G  +TE     G+D   I +  +K +               DG  + + GH
Sbjct: 118 PLVEGEIASGFSMTEPLDGAGSDPKMIRTTAEKNAAEGASGDPRETTASRDGDEWVIDGH 177

Query: 232 KWFLSSPM-SDAFIMLAQVEGRV----GC--FLVPRLLEDGSPNGLCYQRLKNKIGN--R 282
           KW+ S+ + +D  I+LA+ +       GC  FLVP        +G+   R    +G   R
Sbjct: 178 KWWTSNGVEADVLIVLARTDPDAHPYEGCSLFLVP-----ADADGVDIVRDVPHMGGGTR 232

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHY 338
             +  E+ + N       LLG+LN      +  ++     +  M  SGM + +L  A  Y
Sbjct: 233 GASHAEIVYENVRVPEEHLLGNLNEGFSHAQ-ARLGPARLTHCMRFSGMAQRALEIAKAY 291

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L D+  ++  IAD    +  A         +  +A  R E+   ARI   
Sbjct: 292 LSEREGFGSTLSDKQSLRHRIADAEARLHVAR-------TAIRDAADRIEDGDEARIPVS 344

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + K +   +    I  A++C G +G  ++  +A  Y
Sbjct: 345 MCKVFTANVTQGAIDLAVQCCGANGIGKDLPLADFY 380


>gi|262372653|ref|ZP_06065932.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262312678|gb|EEY93763.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 399

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   +  D  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 130 MAITEPGCGSDSAAIRTTATQDGDE-YILNGEKIFVTSGDRADSVVVWATLDKKLGRAAI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+VP+    G+P G+  +RL++K+G +++ T  + F
Sbjct: 189 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISF 221


>gi|15600188|ref|NP_253682.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|254238293|ref|ZP_04931616.1| hypothetical protein PACG_04424 [Pseudomonas aeruginosa C3719]
 gi|9951280|gb|AAG08380.1|AE004912_6 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126170224|gb|EAZ55735.1| hypothetical protein PACG_04424 [Pseudomonas aeruginosa C3719]
          Length = 429

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 43/307 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG---LGLTE 204
           A  L+ P +++A+ +    +P     W P   S E  P     + + S+      L    
Sbjct: 153 AAALLVP-LSAANCIRRWGSPSQQAQWLPAFVSEEGAPLTAIAVNEPSLLFDPQKLATRA 211

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +R G+                Y LSG K   L    +   I+ A+ +     FLV     
Sbjct: 212 RRKGSH---------------YLLSGEKCLVLRGLEASRLIVAAKTDEGPALFLV----- 251

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           + S  G+  +R +  +G ++  T  L   +    +  D  ++    E      +LD A +
Sbjct: 252 EASAKGV-ERRAEPAMGLKAGGTARLRLKSVK--VPADNRLAA---EHFDYRAFLDHASL 305

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   + +   +A     I Y   R   G  +  +  +   +ADIA+++ A   + +R   
Sbjct: 306 AWCALALGTGQAALDYVIAYCNEREAFGEPISHRQGVAFMVADIAIELDAMRLMVWRACA 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +  +    EA  AR++       C + A  +  +A++ +GG G+ +E    R YR+  
Sbjct: 366 LAERGQPFQREAYLARLL-------CAEKAMKIGTDAVQLLGGHGFTKEHPAERWYRDLR 418

Query: 439 ANSILLG 445
           A +++ G
Sbjct: 419 AVALMAG 425


>gi|264677858|ref|YP_003277764.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208370|gb|ACY32468.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 380

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 24/266 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258
           L +TE  GG+D+AA+ ++ ++  D  Y + G K F++S M   +I +A   G   G   +
Sbjct: 122 LAITEPGGGSDVAALRTRARREGD-EYVIEGEKTFITSGMRADWITVAVRTGEERGASGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
             +L  G   GL   +L +K+G + + T  L F    G  +   ++     E  + +++ 
Sbjct: 181 SLILVPGDSAGLRRSQL-HKMGWQCSDTAHLFFD---GVRVPASHLLGAEGEGFRAIMHN 236

Query: 318 -----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A  ++   +    EA+ +A++R   G  L    V++  + D+   + +  A 
Sbjct: 237 FNGERLGIACAALGFAQACYDEALAWAQQRQTFGVTLNQHQVIRHKLVDMQQRLRSTEAW 296

Query: 373 SFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +    D   S ++   E    +  A  T  +C          A++ +GG G++    
Sbjct: 297 INAVCARADGGDSGADWVGEVCVLKNHATQTMQFCADT-------AVQILGGLGFMRGTL 349

Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455
             R YRE     + +G G   ++  L
Sbjct: 350 SERIYRE--VKVLTIGGGTEEIMKEL 373


>gi|189194539|ref|XP_001933608.1| acyl-CoA dehydrogenase family protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979172|gb|EDU45798.1| acyl-CoA dehydrogenase family protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 511

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 50/272 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +      DG  Y + G  KW  +    D F+   + +      L
Sbjct: 244 LAITEAFAGSDVAGIRTTATLSPDGKHYIVRGTKKWITNGMFCDYFVTGCKTDKGFSVLL 303

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
           + R            + ++ K+       ++  +S T G    + N +  PV     E+ 
Sbjct: 304 IER-----------DEAVETKL-------IKTSYSTTAGTAFVEFNDAKVPVHHLLGEEH 345

Query: 313 KILIYLDSA------IMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K  I + S       +MS + +R S   + E + +  +R V G  LI+QP +++ +A + 
Sbjct: 346 KGFIVIMSNFNHERFVMSCAVIRQSRTIVEECLKWCNQRIVFGKKLIEQPAIRQKLAKMI 405

Query: 364 LDIAAATA----LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAME 417
             + A  A    ++F++ +     +S+        +  PI   K +  + A  +  EA+ 
Sbjct: 406 SHVEANQAWLESIAFQMTHMSYAQQSK-------LLGGPIGLLKSFATRSAHEIADEAVN 458

Query: 418 CIGGSGYIE---ERSIARHYRESPANSILLGS 446
             GG G  +    R I + +R    ++IL G+
Sbjct: 459 IFGGRGLTQGGMGRVIEQFHRTYKFDAILGGT 490


>gi|70730016|ref|YP_259755.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68344315|gb|AAY91921.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 387

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 92/237 (38%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L     NGL  Q 
Sbjct: 147 YVINGQKVWISRIQHSDLMILLARTTPLAEVRKKSEG-MSIFLVD--LRQAIGNGLTVQP 203

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 204 IANMVNHETN---ELFFDNLELPADSLIGEEGKGFKYILDGLNAE-------RTLI---- 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 250 AAECIGDGRWFIDKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 310 DSGGN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 359


>gi|313902625|ref|ZP_07836024.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467063|gb|EFR62578.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 23/258 (8%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSP 238
           REY P     + +  +    GLTE  GG+D  ++ ++ +K  DG  Y ++G K W  +  
Sbjct: 116 REYLPK----LARGELIGCFGLTEPDGGSDPGSMKTRARK--DGSSYVITGRKMWITNGN 169

Query: 239 MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++   ++ A+  EG +  F+VP      +P G   + + +K+  R++ T EL        
Sbjct: 170 LAHIAVVWAKDDEGVIRGFIVP----TDTP-GFRAREIPHKMSLRASVTSELILDEVRVD 224

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
               L  + G    +  L      I   +   +     EA+ +AR R   G  + ++ ++
Sbjct: 225 AAQMLPEARGLGAALSCLTQARYGITWGAAGAIDAVFHEALEFARHRVTFGRPIAERQLV 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  + ++      A  +S+RL    DE K       YA++   + K    + A      A
Sbjct: 285 QAKLVEMVQAHTQALLMSWRLGKLKDEDK-----LTYAQV--SLAKRSNVRAALQAARSA 337

Query: 416 MECIGGSGYIEERSIARH 433
            E +GGSG   E +  RH
Sbjct: 338 REILGGSGITLEYAAIRH 355


>gi|311108995|ref|YP_003981848.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763684|gb|ADP19133.1| acyl-CoA dehydrogenase, N-terminal domain protein 23 [Achromobacter
           xylosoxidans A8]
          Length = 389

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 22/236 (9%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D + + ++ ++     + L+GHK F+S  +   F ++LA+ E  V  FLVP      +
Sbjct: 143 GSDPSMLRTRAER-RGARWVLNGHKQFISGGVGADFALVLARAEAGVTLFLVP----ADT 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS- 324
           P     + +    G +     E+   +     +GD  V   P   ++   + L+ A +S 
Sbjct: 198 PGYRVVRDIGMVTGYQIGGHAEILLQDCE---VGDEAVLGEPGRGLEYAQLRLEPARLSH 254

Query: 325 ----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +   R +L  A  Y  +R   G  L D   ++  +AD  +D+ A+  ++   A   
Sbjct: 255 CMRYIGRARRALETAQAYVVQRDSFGSRLADLQQIQAMVADSHIDLHASRLMTLDCAGRM 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           DE  S  + +A       +TK +  +    V   A++ +G SG  ++  +A  ++E
Sbjct: 315 DEGLSVKQHSA-------MTKVFVSEAVNRVADRAVQMMGASGLSDDTPVAMVWQE 363


>gi|183980183|ref|YP_001848474.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium marinum M]
 gi|183173509|gb|ACC38619.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium marinum M]
          Length = 403

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 57/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
           TP     W P++F    DP   A             +E   G+D+ AI ++     + G 
Sbjct: 103 TPEQLGRWLPEMFGTPGDPKLGA----------FCSSEPDAGSDVGAIRTRAHFDEAAGE 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  +  +++  I++  V   +G      F++P         GL   +   K 
Sbjct: 153 WVLNGTKTWATNGGIANVHIVVVSVHPELGTRGQATFVIPP-----GTKGLTQGQKFKKH 207

Query: 280 GNRSNATVELEFSNTF---GFLLGD--------LNVSTGPVED----MKILIYLDSAI-- 322
           G R++ T E+   N       +LG           V +G        MK        +  
Sbjct: 208 GIRASHTAEVVLDNVRLPEDAILGGREKFEARIARVKSGASARGQAAMKTFERTRPTVGA 267

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA  L +R       
Sbjct: 268 MAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKARIDAARLLVWRAGWMARN 327

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++FD A     E + A+++A  T  +       V  EA++ +GG+GY  +  + R +R+
Sbjct: 328 NHNFDSA-----EGSMAKLVASETAVY-------VTDEAIQILGGNGYTRDYPVERMHRD 375

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 376 AKIFTIFEGT 385


>gi|327350387|gb|EGE79244.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 490

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 97/279 (34%), Gaps = 49/279 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-------------DGIYCLSGHKWFLSSPMSDAFIML 246
            GLTE + G+D   + +  + +              DG       KW   +      I+ 
Sbjct: 166 FGLTEPKHGSDATFMETAARPVQREYPAGSGAANAVDGFVINGAKKWQTGAHNCTHMIIF 225

Query: 247 AQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGF 297
           A+  G  G       FLVPR  E    N L Y+   N   + +   +E  F   S   G 
Sbjct: 226 ARTSGAPGSARGITAFLVPR--ETPGVNILSYEWTLNMPTDHATVALEDVFVPRSAVLGE 283

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVM 355
           L   L ++   V + +I      A  S    R  L +AI YA  R +   G  L D   +
Sbjct: 284 LDRGLAIAQTFVHENRI----RQAASSCGAARFCLDKAIEYANEREIWGKGKTLSDNQAI 339

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSR----------SEEAAYARIMAPIT----- 400
           +  + ++   +     L  R     D+  +             +  +  I   +T     
Sbjct: 340 QFQVVELMTQVEMLRLLILRTGWEMDQVTAECGGHIDSPVPGSKKPWVEIEKRLTHKVAM 399

Query: 401 -KYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
             +W  ++       A++  GG+GY   +    I RH+R
Sbjct: 400 CNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFR 438


>gi|302344670|ref|YP_003809199.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641283|gb|ADK86605.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 368

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 36/327 (11%)

Query: 131 QAHKIRAARLYLMAQLE-AGH----LMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREY 183
           +  ++R A L L  +L  AG+       P++T A  ++ +L  +  +  +++ ++F R  
Sbjct: 33  RGQRVRPALLGLTGRLAGAGYPGLSAGDPALTVAQETVASLCPSLFLGLEYSARVFGRLV 92

Query: 184 DPTNKA-------PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           +    A       P      AIG L + E+    +  A  +     + G+         +
Sbjct: 93  EELGSAAQKQAILPALTAGRAIGALAMAEQNTSLEKNASQTTATPAAGGLLLRGRKGPTI 152

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           ++P++D   ++A       C LVP         GL        +G    A  ELE     
Sbjct: 153 NAPLADWLAVVATGPDGPLCCLVP-----ADAPGLNLGPRLATVGLDGLAVAELELDGCL 207

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGG--ILI 350
             + G++ +  G      I  + D  +++V+ + V+   A H AR R   H SGG  I+ 
Sbjct: 208 --VPGEMTIPLGAAGPATIRAFEDQ-VLAVAALGVAW-RAYHAARLRAKEHKSGGKPIIA 263

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
            Q +  + +A++   + ++  L++R A    EA  R  EAA   + A   K +  + A  
Sbjct: 264 YQEIGFK-LAEMLTYVQSSQLLAYR-AAWLREAGDR--EAAVTALSA---KVYIAESAEK 316

Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437
           V +EAM+ +GG+G+I   +    YR++
Sbjct: 317 VASEAMQIMGGAGFIRGNAAEESYRDA 343


>gi|260807431|ref|XP_002598512.1| hypothetical protein BRAFLDRAFT_118308 [Branchiostoma floridae]
 gi|229283785|gb|EEN54524.1| hypothetical protein BRAFLDRAFT_118308 [Branchiostoma floridae]
          Length = 766

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 133/338 (39%), Gaps = 63/338 (18%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +P   +   + L  TP   K W               P+ +  +     +TE    +  A
Sbjct: 459 APDTGNMETIHLYGTPEQKKTWL-------------EPLLEGKIKSCFAMTEPDVASSDA 505

Query: 213 -----AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR------L 261
                +I  QG +     Y ++G KW+ S         +A + GR G   +PR      +
Sbjct: 506 TNMQCSIERQGNE-----YVINGKKWWTSG-AGHPHCKVAVLMGRTGDSKMPRHRQHSMI 559

Query: 262 LEDGSPNGLCYQRLKNKIG--NRSNATVELEFSNT----FGFLLGD---LNVSTGPVEDM 312
           L      G+   R     G  +  +   E+ F+N        LLG+     ++ G +   
Sbjct: 560 LVPMDAPGVKIIRALTVFGYDDAPHGHCEVHFTNVRVPVTNMLLGEGRGFEIAQGRLGPG 619

Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +I        M + GM     EA+   A +R   G  +I+Q V++  IA+  + I  A  
Sbjct: 620 RI-----HHCMRLIGMAEKALEAMCERAAKRRPFGKRIIEQEVVQHDIAEARMAIEQARL 674

Query: 372 LSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  + A+  D    K   +E A  +I+AP       +MA  VI  A++  GG+G  ++  
Sbjct: 675 LVLKAAHMVDTVGTKKARKEIAMIKIIAP-------RMAVRVIDRAIQVHGGAGVCQDFH 727

Query: 430 IARHYRESPANSILLGSGNAMV-------LDVLNLLEK 460
           +A  Y  + A +I +  G   V       +++L+ L+K
Sbjct: 728 LAGMY--AGARTIQIADGPDEVHLTAVAKMEILDQLKK 763


>gi|119475493|ref|ZP_01615846.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451696|gb|EAW32929.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 383

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 156/411 (37%), Gaps = 60/411 (14%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
             ++EL  E V    A+E++              P  E+W+K +  P       R I + 
Sbjct: 7   QSDVELFRENVKRFIAEEIS--------------PHFEQWEKDKIIP-------RDIWN- 44

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
               I D  F  V   + +    A     A +E         + A   ++ +   VH D 
Sbjct: 45  ---KIGDAGFLCVDTPEQYGGFGAHFIFSATIE------EEFSRAGCASIASNISVHSDI 95

Query: 175 -APKIFSR--EYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            AP + +   E       P   +   +G + +TE   G+D+  I +  +K  +  Y ++G
Sbjct: 96  VAPYLINHGTEEQKNKYLPKMVSGEYVGAIAMTEPGAGSDLQGIRTTAKKDGEN-YIING 154

Query: 231 HKWFLSSPMSDAFIMLA-----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            K F+++     F++ A     +V G  G  L    + D +  G    R  +KIG  S  
Sbjct: 155 SKTFITNGQHCDFVITATKTNTEVSGSKGTSL---FIVDTNNTGFSRGRNLDKIGQHSAD 211

Query: 286 TVELEF---SNTFGFLLGDLNVSTGPVED---MKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           T EL F   S + G LLG L+     + +    + LI    AI +  G+   L   I Y 
Sbjct: 212 TSELFFEQVSVSSGALLGQLDCGFAVLMNELPRERLILSIGAIAACEGI---LDWTIEYT 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R      +      +  +A++  +    T ++    N   +  S+ E       MA +
Sbjct: 269 SERKAFSQTISSFQNTRFRVAEMTTE----TRVNRSFVNECIDLYSKGELDTATASMAKL 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +     ++   V+   ++  GG GY+ E  I R + ++    I  G+   M
Sbjct: 325 S---TTELQGRVVDGCLQLFGGYGYMVEYPIGRAFVDARIQRIYGGTSEIM 372


>gi|325287441|ref|YP_004263231.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324322895|gb|ADY30360.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 602

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 39/273 (14%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  +      DG  Y ++G K W  ++      I+ A++E    +  F+
Sbjct: 151 LTEPGAGSDANSGKTTAVLSEDGKSYKINGQKMWISNAGFCSLMIVFARIEDDKNITGFI 210

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V    E+   NG+     ++K+G R+++T ++ F++T   ++   N+  G  E  KI   
Sbjct: 211 VEYDPENA--NGITLGEEEHKLGIRASSTRQVFFNDT---VVPAENMLAGRGEGFKI--- 262

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALD 365
              A+ +++  R+ LA A   ++RR V+ G+            + D   +K  IA++A +
Sbjct: 263 ---AMNALNVGRIKLAAACLDSQRRIVTTGVQYANERKQFKTPISDFGAIKVKIAEMATN 319

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAP---ITKY--WCCKMAPAVIAEAMEC-- 418
             A  + ++R + + ++  +  E A      A    + +Y   C  +  AV  +   C  
Sbjct: 320 AYAGESATYRASKNIEDRIAMREAAGNTHQEAELKGVEEYAIECSILKVAVSEDVQNCAD 379

Query: 419 -----IGGSGYIEERSIARHYRESPANSILLGS 446
                 GG G+ EE  +   +R++    I  G+
Sbjct: 380 EGIQIFGGMGFSEETPMEAAWRDARIARIYEGT 412


>gi|257056851|ref|YP_003134683.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586723|gb|ACU97856.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 382

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 27/258 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------V 253
           L+E+  G+D A++ ++     D  + L+G K W  ++  S  + ++A  +         +
Sbjct: 125 LSEREAGSDTASMRTRAHLDGDH-WVLNGTKCWISNAGESSWYTVMAVTDPNAKKKAHGI 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V +        G      + K+G + + T E+ F N    +  D  +         
Sbjct: 184 SAFVVHK-----DDPGFSVGPKERKLGIKGSPTREIYFENCT--IPADRIIGEPGTGLKT 236

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  LD    ++    + +A+      + Y + R   G  +     ++  +AD+A+ I A
Sbjct: 237 ALATLDHTRPTIGAQALGIAQGALDATVEYVKERKQFGQSISQFQGVQFMLADMAMKIEA 296

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  + +  A + +   +R      A  +A   K +   +A  V  +A++  GG+GY  + 
Sbjct: 297 ARHMVYASAAATERGDAR------ASFLASAAKTYASDVAMEVTTDAVQLFGGAGYTRDF 350

Query: 429 SIARHYRESPANSILLGS 446
            + R  R++    I  G+
Sbjct: 351 PVERMMRDAKITQIYEGT 368


>gi|114656353|ref|XP_001142569.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 1 [Pan
           troglodytes]
          Length = 407

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 45/264 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIG 420
                 +  + A  V  + ++C G
Sbjct: 363 ------YSAECATQVALDGIQCFG 380


>gi|307292550|ref|ZP_07572396.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880616|gb|EFN11832.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 31/250 (12%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ +    I + +TE   G+ +  +T+   +  DG Y ++G K F ++  + A + L  
Sbjct: 112 APLLRGEGLISVAMTEPNAGSAVTELTTTAVEDGDG-YRITGQKIF-TTHGTHATVFLVY 169

Query: 249 VE-----GRVGCFLVPRLLEDGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDL 302
           V      G +G  L+ R  E     G  + + ++   G   N    L F N +   +   
Sbjct: 170 VRFGPGTGNIGSVLIERGQE-----GFSFGKPIRFLSGEEWNP---LFFDNVY---VPKD 218

Query: 303 NVSTGPVEDMKILIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            V  GP    K +   +     +   S++  R +   A+ +A+ R   G  L +   ++ 
Sbjct: 219 KVLLGPGGFKKQMSGFNVERIGNTARSLALGRYAFNAAVEHAKTRRQFGKALCEFQGLQW 278

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             A++ L + AA  L +R A + D      +E A A++      + C         EA++
Sbjct: 279 KFAEMKLKLDAAQLLLYRAATNADAGLPSPDETAIAKVACNRAGFDCAN-------EAIQ 331

Query: 418 CIGGSGYIEE 427
            +GG+GY ++
Sbjct: 332 IMGGAGYSQD 341


>gi|307726733|ref|YP_003909946.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587258|gb|ADN60655.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 5/125 (4%)

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V GM  ++     Y + R   G  +    V++  IAD+A ++    ++ + L  S +   
Sbjct: 245 VGGMEKAIELTAEYLKVRKQFGVPIASFQVLQHRIADMAAEMELGRSMLYALLESIEH-- 302

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E A  R ++   K    + A  V A+A++  GG G  EE  +   Y+ +    +LL
Sbjct: 303 --GDEPARLRAVSQ-AKSIVGRAARFVCAQAIQLHGGIGMTEEYQVGHFYKRAVVADVLL 359

Query: 445 GSGNA 449
           GSG+A
Sbjct: 360 GSGDA 364


>gi|302890327|ref|XP_003044048.1| hypothetical protein NECHADRAFT_91441 [Nectria haematococca mpVI
           77-13-4]
 gi|256724967|gb|EEU38335.1| hypothetical protein NECHADRAFT_91441 [Nectria haematococca mpVI
           77-13-4]
          Length = 417

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 5/170 (2%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D+A IT+  ++  D        KW  +   +D +   A   G  G F + 
Sbjct: 152 LAVTEPDAGSDVAGITTTAERKGDKYIVNGAKKWITNGIFAD-YCTAAVRTGGDGTFGIS 210

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
            L+     +G+  ++++N  G  ++ +  +EF N       LLG+ N     + +     
Sbjct: 211 ALIVPLKASGVTCKKIENS-GVEASGSTYIEFDNVEVPVSNLLGEENKGFPIIMNNFNHE 269

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            L  A  ++   RV L +A  +A  R   G  LI   V++   + +A  I
Sbjct: 270 RLWLACTALRMARVCLHDAYKHALNRETFGKPLIQNQVIRAKFSTMARHI 319


>gi|313221396|emb|CBY32149.1| unnamed protein product [Oikopleura dioica]
          Length = 598

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 46/281 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D A+I ++     DG  Y L+G K W  +   +D F +  +         
Sbjct: 172 FALTEPGSGSDAASIQTRATPSEDGKTYYLNGGKVWISNGGFADIFTVYCK--------- 222

Query: 258 VPRLLEDGSP-------------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           VP + EDG+               G+     + K+G + + T E+ F NT    +   N+
Sbjct: 223 VPEVQEDGTTVDKMAAFIVERDFGGVTNGPPEKKMGIKCSNTAEVYFDNT---PIPAENL 279

Query: 305 STGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G  +  K+ +  L++    +S      MR     A  +A  R      + +   ++  
Sbjct: 280 IRGVGDGFKVAMEVLNNGRFGMSSCLAGTMRQLTKRAAEFAYSRKQFNDKIYNYGAIQEK 339

Query: 359 IADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +A +A +  A  ++++ ++ + D +A++   EAA  +I     K W          E ++
Sbjct: 340 LARMAAEQYAVESVAYLISQAMDSKAENYHLEAAIGKIFGS-EKAW------QAADECIQ 392

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG G++ E+ + +  R+     I  G+      D+L L+
Sbjct: 393 TMGGMGFMYEQGVEKIMRDLRIFRIFEGTN-----DILRLM 428


>gi|225709870|gb|ACO10781.1| Probable isovaleryl-CoA dehydrogenase [Caligus rogercresseyi]
          Length = 416

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 49/273 (17%), Positives = 109/273 (39%), Gaps = 30/273 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252
           LG++E   G+D+A+I +  ++  D +       W  +   +D   +LA  E +       
Sbjct: 154 LGVSEPGAGSDVASIRTNARRNGDDLLINGSKMWITNGLQADWMCLLANTEDQESNPHRN 213

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
                +P         G+   +   KIG   + T E+ F +      +++G      G  
Sbjct: 214 KSLICLPM-----DTPGITIAKKIEKIGMLCSDTAEIYFEDVRVPQSYIIG----KPGQG 264

Query: 310 EDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++L + +    +A + +  +   L E I Y R R      ++D   ++  +A++A +
Sbjct: 265 FTYQMLQFQEERIAAATLCLGPLERMLEETIEYTRNRKAFKSTILDNQYVQFKLAELATE 324

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    +  +R  +++   +          ++A + K  C ++        ++  GG G+ 
Sbjct: 325 VELLRSGVYRTTDAYLAGQD-------VTLLASMLKLKCGRLIRETSDTCLQFWGGMGFT 377

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               I+R +R+    SI  G+   M+  +  L+
Sbjct: 378 SSVGISRAFRDFRLISIGGGADEVMLSIISKLM 410


>gi|116327431|ref|YP_797151.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331955|ref|YP_801673.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116120175|gb|ABJ78218.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125644|gb|ABJ76915.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 391

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 19/264 (7%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAF-IMLA 247
           P+ +  +     +TE   G      T     I DG  Y ++G KW+ +     +F I+++
Sbjct: 119 PLIQGKIRSAFAMTELPPGAGADPQTLTTNAIKDGNEYVINGRKWYCTGANGASFLIVMS 178

Query: 248 QVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           +V     R   FLVP      +P     + +     +      EL+F N       +LG 
Sbjct: 179 KVADSFRRTTMFLVP----TDAPGYTMVREIGVMGSHGPGGHCELKFENVRVPESAILGR 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +       ++      L   +  +   R S+  A  YA +R V G  L D   ++   A+
Sbjct: 235 VGEGFKWSQERLGPARLTHCMRWIGLARRSMEIAREYALKREVFGQKLADHQGIQWMFAE 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            AL+I +   L+ + A++    +        AR +  + K+   +     +  A++  G 
Sbjct: 295 SALEIESGYMLTLKAAHTLRAGED-------ARQIISMAKWQVSETLCKTVDRAIQICGS 347

Query: 422 SGYIEERSIARHYRESPANSILLG 445
            GY  +  +   YR++ A  I  G
Sbjct: 348 HGYGRDMKLELFYRDARAARIADG 371


>gi|33599581|ref|NP_887141.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567177|emb|CAE31091.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 26/251 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   + +  +K  DG Y ++G K F+S+  ++D  ++LA+         +
Sbjct: 123 FAVTEPDPGLDTTKLKTVARKQPDGSYLITGKKVFISTAQVADHMLILARTTP------I 176

Query: 259 PRLLEDGSPNGLCYQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315
             + +      L Y +L +N +  R    +     +T    + +L V+   +  E+ K L
Sbjct: 177 EEVKKHSEGLSLFYTKLDRNYVDIREIDKLGRGAVDTNELFIDNLPVAKDALIGEEGKGL 236

Query: 316 IY----LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
            Y    +++  + V+  +V +  A+      YA+ R V G  +     ++  +A    ++
Sbjct: 237 SYIFHGMNAERVLVAAEQVGMGRAVLKLATQYAKERVVFGRPIGKNQGIQHPLARSWAEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A+ +D  +S   EA  A+++A       C+        ++   GG GY +
Sbjct: 297 EAANHMMLAAADLYDRGESCGSEANAAKLLASEACMQACQ-------NSILTHGGYGYAK 349

Query: 427 ERSIARHYRES 437
           E  + R  RE+
Sbjct: 350 EYHVERFMREA 360


>gi|229822328|ref|YP_002883854.1| acyl-CoA dehydrogenase domain protein [Beutenbergia cavernae DSM
           12333]
 gi|229568241|gb|ACQ82092.1| acyl-CoA dehydrogenase domain protein [Beutenbergia cavernae DSM
           12333]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 118/307 (38%), Gaps = 56/307 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P +       T +A           GLTE   G+D  A  +   +  D  +
Sbjct: 103 TPEQQQRWLPDLL------TGRA-------LAAFGLTEAEAGSDAGATRTTAVQDGDA-W 148

Query: 227 CLSGHKWFLS---SPMSDAFIMLAQVEGRV-----------GCFLVPRLLEDGSPNGLCY 272
            + G K F++   +P++ + I +  V G V             FLVP     G+P GL  
Sbjct: 149 VIDGSKQFITNSGTPIT-SVITITAVTGEVVRDDGATVKELSSFLVP----SGTP-GLEV 202

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
               +K+G  ++ T  L  S        +LGD             L  LD   ++ + + 
Sbjct: 203 GPSYDKVGWHTSDTHPLTLSGVRVPASDMLGDRGRGYA-----NFLRALDEGRVAFAALA 257

Query: 330 VS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                  L EA+ YA+ RHV G  +        A   IA  +A   + +     ++ +A 
Sbjct: 258 TGAAQGCLEEALRYAKERHVFGREI-------GANQHIAFTLARMQSRAHTARLAYYDAA 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R +     +  A + K    + A A   +A +  GG G++    + RHYR+  A  + +
Sbjct: 311 QRIDARLPFKAEASMAKLVAGEAAMANARDASQIFGGYGFLNSSPVGRHYRD--AKVLEV 368

Query: 445 GSGNAMV 451
           G G   V
Sbjct: 369 GEGTTEV 375


>gi|149918470|ref|ZP_01906960.1| acyl-CoA dehydrogenase family protein [Plesiocystis pacifica SIR-1]
 gi|149820770|gb|EDM80180.1| acyl-CoA dehydrogenase family protein [Plesiocystis pacifica SIR-1]
          Length = 619

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 60/313 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
           + LTE   G+ +  ITS    I    ++G + + G K F+S    D       + LA+  
Sbjct: 164 MSLTEPGAGSGLGDITSTATPIEGREAEGAHHIRGSKIFISGGDLDFRDNIVHLTLARRP 223

Query: 251 GR------VGCFLVPRL-----LEDGSP------------NGLCYQRLKNKIGNRSNATV 287
           G       +  F VPRL     LED S             N +   +L +KIG +   ++
Sbjct: 224 GDPPGVKGISLFAVPRLRPSAGLEDPSNEDAGEGEIAVEFNDVHTSQLIHKIGWKGLPSL 283

Query: 288 ELEFS---NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            L +    +  G+++G+    L+     + + +IL+  +    + +    +  +++ YAR
Sbjct: 284 GLSYGEADDCVGWIVGEPCRGLSYMFQMMNEARILVGANGTATASA----AYHQSVDYAR 339

Query: 341 RRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            R     +           +I+ P +KR +      + A+  L    +   D A+  + E
Sbjct: 340 ERKQGRSLDPRQKTKEPIPIIEHPDVKRMLLRQKAIVEASMCLVMTASRYNDVAEHGANE 399

Query: 390 AAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               R      I+ PITK +  +      + A++  GG GY  E      +RE   NSI 
Sbjct: 400 GDRKRARMILDILTPITKTFPAERGFESTSLALQIHGGYGYSSEYLPELWFREQRLNSIH 459

Query: 444 LGSGNAMVLDVLN 456
            G+     LD+L 
Sbjct: 460 EGTTTIQGLDLLG 472


>gi|152989053|ref|YP_001349979.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150964211|gb|ABR86236.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +    GL  Q 
Sbjct: 146 YVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEG-MSIFLVD--LREAIGKGLTVQP 202

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 203 IANMVNHETN---ELFFDNLEIPVDSLIGEEGKGFRYILDGLNAE-------RTLI---- 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +
Sbjct: 249 AAECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACREY 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 309 DAGLN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 358


>gi|313236421|emb|CBY11738.1| unnamed protein product [Oikopleura dioica]
          Length = 598

 Score = 40.4 bits (93), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 46/281 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D A+I ++     DG  Y L+G K W  +   +D F +  +         
Sbjct: 172 FALTEPGSGSDAASIQTRATPSEDGKTYYLNGGKVWISNGGFADIFTVYCK--------- 222

Query: 258 VPRLLEDGSP-------------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           VP + EDG+               G+     + K+G + + T E+ F NT    +   N+
Sbjct: 223 VPEVQEDGTTVDKMAAFIVERDFGGVTNGPPEKKMGIKCSNTAEVYFDNT---PIPAENL 279

Query: 305 STGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G  +  K+ +  L++    +S      MR     A  +A  R      + +   ++  
Sbjct: 280 IRGVGDGFKVAMEVLNNGRFGMSSCLAGTMRQLTKRAAEFAYSRKQFNDKIYNYGAIQEK 339

Query: 359 IADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +A +A +  A  ++++ ++ + D +A++   EAA  +I     K W          E ++
Sbjct: 340 LARMAAEQYAVESVAYLISQAMDSKAENYHLEAAIGKIFGS-EKAW------QAADECIQ 392

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG G++ E+ + +  R+     I  G+      D+L L+
Sbjct: 393 TMGGMGFMYEQGVEKIMRDLRIFRIFEGTN-----DILRLM 428


>gi|296170318|ref|ZP_06851909.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895041|gb|EFG74760.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 399

 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 32/173 (18%)

Query: 145 QLEAGHLMSPSVT--SASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +LE      P VT  + +MVA       +P++  +  PK+FS E             V +
Sbjct: 77  ELEKRRAHVPWVTWGTTAMVARSVDRFGSPQLRDEVLPKVFSGE-------------VRL 123

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML-------AQVE 250
            LG TE  GG+D+A   ++  + +DG  + ++G K F +   +  ++ L       A   
Sbjct: 124 CLGYTEPEGGSDVATCKTRAVREADGSSWIINGSKMFTTGAHNCQYVFLITNTAPDAPKH 183

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
             +  FLVP      SP G+  Q ++   G+R+N     +      + LGD+N
Sbjct: 184 KSLTMFLVPL----DSP-GIEIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVN 231


>gi|324010305|gb|EGB79524.1| acyl-CoA dehydrogenase, middle domain protein [Escherichia coli MS
           60-1]
          Length = 289

 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P   T   IG + LTE   G+D+  + ++ Q+  DG       KW     ++D FI+L  
Sbjct: 108 PKLATGELIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGKKKWITLGQIADFFIVLIH 167

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
              ++   L+ R     + +G     L + +G R N   EL F++
Sbjct: 168 CGNQLATVLIDR-----NTDGFTITPLNDMLGLRGNMLAELHFND 207


>gi|288931877|ref|YP_003435937.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894125|gb|ADC65662.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 355

 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 200 LGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVG-- 254
           L +TE  GG+D+A A+ ++ ++  D +Y ++G+K  +++   ++ FI++A+  EG  G  
Sbjct: 105 LAITEPTGGSDVANAVKTKAERKGD-VYVINGNKTLITNGEFAELFIVIARTGEGAKGLT 163

Query: 255 CFLVPRL---------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            F+V R          L     +GL   R K+         VE+   N  G     + V+
Sbjct: 164 AFIVERGEGIETTKIDLSGMRGSGLASVRFKD---------VEVPAENVIGGEGKGMRVA 214

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +   +I      A M +   +  L  A+  A+ R   GG L D   ++  +A++A D
Sbjct: 215 LGTLAPNRIPF----AAMGIGIAQRCLDLAVERAKSREAFGGRLADLQAVQFMLAELAAD 270

Query: 366 IAAATALSFRLAN 378
           + A   L +  A 
Sbjct: 271 VEALRKLIYGFAK 283


>gi|148553250|ref|YP_001260832.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498440|gb|ABQ66694.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ K    I + +TE   G+ +  +T+      DG + +SG K F ++  + A + L  
Sbjct: 112 APLLKGDGLISVAMTEPNAGSAVTELTTTAVPDGDG-FRISGQKIF-TTHGTHATVFLVY 169

Query: 249 VE-----GRVGCFLVPRLLED---GSP---------NGLCYQRL---KNKIGNRSNATVE 288
           V      G +G  L+ R  E    G P         N L +  +   K+K+         
Sbjct: 170 VRYGPGTGNIGSVLIERGQEGFSFGKPVRFLSGEEWNPLFFDNVHVPKDKV--------- 220

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           L     F   +   NV             + +   S++  R +   A+ +A+ R   G  
Sbjct: 221 LLGPGGFKQQMSGFNVER-----------IGNTARSLALGRYAFNAAVEHAKTRKQFGRA 269

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L +   ++   A++ L + AA  L +R A + D+     +E A A++      + C    
Sbjct: 270 LCEFQGLQWKFAEMKLKLDAAQLLLYRAATNADKGLPSPDETAIAKVACNRAGFDCAN-- 327

Query: 409 PAVIAEAMECIGGSGYIEE 427
                EAM+ +GG+GY ++
Sbjct: 328 -----EAMQVMGGAGYSQD 341


>gi|116694920|ref|YP_729131.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529419|emb|CAJ95766.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 379

 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 23/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPR 260
           LTE R G++ A + ++     DG Y L G K F+S+  +  FI++ A+ +   G   +  
Sbjct: 126 LTEPRAGSNPADMATRATPEGDG-YRLRGVKHFISNADAADFIVVYAKTDPAAGTRGISA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMKI 314
            + D    G+     +  +G R     E+        +N  G         TG    MK+
Sbjct: 185 FVVDRHSEGVQIAPAEKLMGIRGAPAHEVALDCFVPAANRLG------PEGTGFRTAMKV 238

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    LD A  S+     +LA A  +AR+R V G  L  +  ++   AD+   + AA  L
Sbjct: 239 LDNSRLDVAATSLGIAEAALACAADWARQRQVGGEPLARKQGLQWMFADMRTRLEAAWLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + + A    + +  +E+A+ A       K +  +M   V   A++  GG G+  E  + R
Sbjct: 299 TLQAAVRRRDGEPFTEQASMA-------KLYASEMVGFVTDAALQIHGGYGFTREMPLER 351

Query: 433 HYRESPANSILLGS 446
             R++    I  GS
Sbjct: 352 LVRDARILRIYEGS 365


>gi|311105970|ref|YP_003978823.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760659|gb|ADP16108.1| acyl-CoA dehydrogenase 1 [Achromobacter xylosoxidans A8]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E    F ++L  LN         +ILI    A  +V   R +L  A+ YA  R V G  +
Sbjct: 231 EEGRGFEYILHGLNPE-------RILI----AAEAVGIGRAALDRAVKYAGERTVFGRPI 279

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +A   + + AA  + F+ A+ +D  K     A  A+ +A    Y  C+ A 
Sbjct: 280 GQNQGIQHPLAQAWMQLEAADLMVFKAASLYDAGKPCGPYANSAKYLAAEAGYNACQTA- 338

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437
                 +  +GG GY +E  + R  RES
Sbjct: 339 ------VMTLGGMGYAKEYHVERLLRES 360


>gi|284042302|ref|YP_003392642.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946523|gb|ADB49267.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 401

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 22/239 (9%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRV----GCFLVPRLL 262
           G+D A + +  +++ DG + ++G K F++  +  AF I +A+   R+    G  +    L
Sbjct: 139 GSDPAMLGTTAERV-DGGWVINGRKRFITGAVGAAFTICMARTGERIDRGEGATM---FL 194

Query: 263 EDGSPNGLCYQRLKNKIGNRS--NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            D   +G   +R+   I +R+      E+ F + F     +LG++ +     +       
Sbjct: 195 VDAGNDGWRVERVMEMI-DRAFPGGHAEVVFEDCFVSDEAVLGEVGLGYRYAQVRLAPAR 253

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L   +  +   R +L +A+ Y   R   G  L +  + +R IA+  +DI ++ AL +  A
Sbjct: 254 LTHCMRWLGLARRALDDALDYVAAREAFGAPLGELGMAQRMIAESVIDIESSRALIWHAA 313

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              D         A+ R  + +TK    +    V+  A++  GG G   E  + R+  E
Sbjct: 314 GVLDGG-------AHGRHESSVTKAHVAEAVNRVVDRAVQLCGGWGVSTEGRLGRYLAE 365


>gi|33595290|ref|NP_882933.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565367|emb|CAE36170.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 26/251 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   + +  +K  DG Y ++G K F+S+  ++D  ++LA+         +
Sbjct: 123 FAVTEPDPGLDTTKLKTVARKQPDGSYLITGKKVFISTAQVADHMLILARTTP------I 176

Query: 259 PRLLEDGSPNGLCYQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315
             + +      L Y +L +N +  R    +     +T    + +L V+   +  E+ K L
Sbjct: 177 EEVKKHSEGLSLFYTKLDRNYVDIREIDKLGRGAVDTNELFIDNLPVAKDALIGEEGKGL 236

Query: 316 IY----LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
            Y    +++  + V+  +V +  A+      YA+ R V G  +     ++  +A    ++
Sbjct: 237 SYIFHGMNAERVLVAAEQVGMGRAVLKLATQYAKERVVFGRPIGKNQGIQHPLARSWAEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A+ +D  +S   EA  A+++A       C+        ++   GG GY +
Sbjct: 297 EAANHMMLAAADLYDRGESCGSEANAAKLLASEACMQACQ-------NSILTHGGYGYAK 349

Query: 427 ERSIARHYRES 437
           E  + R  RE+
Sbjct: 350 EYHVERFMREA 360


>gi|302771341|ref|XP_002969089.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
 gi|300163594|gb|EFJ30205.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
          Length = 415

 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 20/239 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++++   K   G + L+G K W  +S  +D  ++ A+     ++  F+V
Sbjct: 156 LTEPDYGSDASSLSTTATKAKGG-WILNGQKRWIGNSTFADVAVIFARNTETNQINGFIV 214

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +    G+P G    +++NKIG R     ++   + F     D         D   ++ +
Sbjct: 215 RK----GTP-GYRATKIENKIGLRIVQNGDIVLKDAF-IPDDDRLPGINSFADTNKVLAI 268

Query: 319 DSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              +++    G+ + + +  H Y   R   G  L    + +  +  +  +I A   + +R
Sbjct: 269 SRIMVAWQPIGVTMGVYDMCHRYLLERKQFGAPLASLQINQEKLVQMLGNIQAMALVGWR 328

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           L   +D  K    +A+ A       K W  K A   +A   E +GG+G + +  +A+ +
Sbjct: 329 LCKLYDSGKMTPGQASLA-------KSWNTKRARETVALGRELLGGNGILVDFLVAKAF 380


>gi|299065649|emb|CBJ36821.1| putative Acyl-CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 45/261 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-----AQVEGR 252
           +   LTE   G+D  A  +Q     +G Y + G K +++   +  +I+      +     
Sbjct: 119 LAFALTEPEAGSDAGAAKTQATPTDNG-YTIRGEKTYITGSATADYILTICRTSSDRSKA 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFG---FLLGDLN 303
            G F+VP     G+   L    L    GN   +       V +   N  G    L    N
Sbjct: 178 FGVFIVP-----GTAPNLTVTPLPKLSGNECASCHIKLDDVAVSSDNVLGGNDALEAAWN 232

Query: 304 VS--TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-----IDQPVMK 356
           V   TG +E + +      + M+    R +   A  + + R   G +L     I   V++
Sbjct: 233 VLRLTGALERLIV------SAMACGLARAATQRAAGFIQERKQFGQLLSNFQSIQHTVVE 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +    A+++    AL  R+  S  +A     +A          KY+C +    ++  A+
Sbjct: 287 MSTLTTAMELMVENAL--RVYGSGSDATEAISKA----------KYFCSEQLQKIVGSAV 334

Query: 417 ECIGGSGYIEERSIARHYRES 437
             +GG  Y +   ++R+YRE+
Sbjct: 335 RVLGGRAYFDFEPVSRYYREA 355


>gi|118469489|ref|YP_884989.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118170776|gb|ABK71672.1| acyl-CoA dehydrogenase, middle domain protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 34/177 (19%)

Query: 145 QLEAGHLMSP------SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +LE G   +P      +  +A  V    TP + ++  P + S               V I
Sbjct: 77  ELEIGRAHTPWFHWGTTAMAAHTVEKFGTPELVEEVLPGVLS-------------GRVRI 123

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML-------AQVE 250
            LG TE  GG+D+A  T + + + DG  + ++G K F S+  +  ++ L       A   
Sbjct: 124 CLGYTEPEGGSDVA--TCKTRAVRDGDAWIINGSKMFTSNAHNAQYVFLVTNTDPEAPKH 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +  FLVP     G+P G+  Q ++   G+R+N T   +   +  + +GD+N   G
Sbjct: 182 NSLTMFLVPL----GTP-GVEIQGIRTVDGDRTNITYYSDVRVSDRYRVGDVNGGWG 233


>gi|114656351|ref|XP_001142638.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 2 [Pan
           troglodytes]
          Length = 444

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 45/264 (17%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A   + 
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362

Query: 397 APITKYWCCKMAPAVIAEAMECIG 420
                 +  + A  V  + ++C G
Sbjct: 363 ------YSAECATQVALDGIQCFG 380


>gi|110834562|ref|YP_693421.1| acyl-CoA dehydrogenase domain-containing protein [Alcanivorax
           borkumensis SK2]
 gi|110647673|emb|CAL17149.1| acyl-CoA dehydrogenase, C-terminal domain [Alcanivorax borkumensis
           SK2]
          Length = 435

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 24/226 (10%)

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  +  +  ++ F++ AQ +     F+V     +G  +GL        +G R++
Sbjct: 224 YILNGEKSLVPLAAEAEIFLIAAQTDSGPAVFIV-----EGGNDGLTAGN-DPSMGIRAS 277

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYA 339
           +   L+       +  D  +     +D     ++D   ++   M +  ++A+      Y 
Sbjct: 278 SQRPLKLDEVR--IPADNRLGN---DDFDYRAFVDLGTLAWCAMTIGTSQAVLDYVGPYC 332

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +  +  +   IAD+A+++ A   L++R A+  ++ KS   E   AR +   
Sbjct: 333 NERTAFGEPISHRQSVAFMIADMAIELDAMRMLTYRAASRAEQGKSFQRETHLARTLVK- 391

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   A  +  + ++ +GG G+ +E  + R YR+  A  I  G
Sbjct: 392 ------DKAMKIGTDGVQLLGGHGFTKEYPVERWYRDLRAVGIAFG 431


>gi|66045416|ref|YP_235257.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|63256123|gb|AAY37219.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
          Length = 387

 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +   NG+  Q 
Sbjct: 147 YVINGQKVWISRVQHSDLMILLARTTPLTDVKKKSEG-MSIFLVD--LREAIGNGMTVQP 203

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 204 IANMVNHETN---ELFFDNLEIPADSLIGEEGKGFRYILDGLNAE-------RTLI---- 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 250 AAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 310 DSGIN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 359


>gi|91978014|ref|YP_570673.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684470|gb|ABE40772.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 30/245 (12%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR------VGCF 256
           EK    D+  + +  +K  DG + + G K+  L+   +D  ++ A+  G       +G F
Sbjct: 127 EKNSRWDLGDVAATAKKKGDG-WIIDGEKFVVLNGEAADTLVVTARTSGGQRDRNGIGVF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSN----ATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           LVP      +  G+  +    + G R+       VE+      G     L +    V+D 
Sbjct: 186 LVP-----ANAKGVSRKGYPTQDGQRAADITFTGVEIGADAAIGDPANGLPLIEQVVDDA 240

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD--IALDIAAAT 370
           +  +  ++    V  M  SL   + Y + R   G  +    V++   AD  +A + A + 
Sbjct: 241 RSALCAEA----VGAMDESLTTTVEYIKTRKQFGVPIGSFQVLQHRAADMFVAAEQARSM 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A+   +A  FD+AK R+   A A++          K A  V  ++++  GG G   E  I
Sbjct: 297 AMFATMAADFDDAKERASAIAAAKVQ-------IGKSAKFVGQQSIQLHGGIGMTMEAKI 349

Query: 431 ARHYR 435
             +++
Sbjct: 350 GHYFK 354


>gi|258511432|ref|YP_003184866.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478158|gb|ACV58477.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 582

 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 50/292 (17%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D +   TS  +  + G Y LSG K W  ++ ++  +++ AQ+  R +  F+V
Sbjct: 144 LTEPDAGSDALHGKTSARRDEARGCYVLSGQKQWISNARVAGVYVVFAQLANRGMTAFVV 203

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVEDMK 313
            R        G+   + ++K+G        +  S T   +L D+ V        P    +
Sbjct: 204 DR-----DRPGVSVGKEEHKVG--------IHASPTASLILDDVEVPESALLGAPGHGHR 250

Query: 314 ILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I + +        A+ ++   R ++  A  YA+ R   G  +    +++  +  +A    
Sbjct: 251 IALSVLNLARHKMALYALGQTRRAIRIAAAYAKERRQFGVPIASFGMIREKLGYMAARYF 310

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAP-------------------ITKYWCCKMA 408
            A + ++R A      K R+ + A    + P                   + K    ++ 
Sbjct: 311 VARSAAYRTAGELAPGKKRALDLALRPDLEPEEKVRGVASALSSCIAACSLNKVLATEVQ 370

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN----AMVLDVLN 456
             VI EA++  GG GY+E+  IAR YR++    I  G+      A V D+L+
Sbjct: 371 AFVIDEAVQIHGGYGYMEDYEIARMYRDARITRIFEGTNEINRLAAVRDLLS 422


>gi|118619971|ref|YP_908303.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium ulcerans Agy99]
 gi|118572081|gb|ABL06832.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium ulcerans Agy99]
          Length = 403

 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 57/310 (18%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225
           TP     W P++F    DP   A             +E   G+D+ AI ++     + G 
Sbjct: 103 TPEQLGRWLPEMFGTPGDPKLGA----------FCSSEPGAGSDVGAIRTRAHFDEAAGE 152

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKI 279
           + L+G K W  +  +++  I++  V   +G      F++P         GL   +   K 
Sbjct: 153 WVLNGTKTWATNGGIANVHIVVVSVHPELGTRGQATFVIPP-----GTKGLTQGQKFKKH 207

Query: 280 GNRSNATVELEFSNTF---GFLLGD--------LNVSTGPVED----MKILIYLDSAI-- 322
           G R++ T E+   N       +LG           V +G        MK        +  
Sbjct: 208 GIRASHTAEVVLDNVRLPEDAILGGREKFETRIARVKSGASARGQAAMKTFERTRPTVGA 267

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA  L +R       
Sbjct: 268 MAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKARIDAARLLVWRAGWMARN 327

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++FD A     E + A+++A  T  +       V  EA++ +GG+GY  +  + R +R+
Sbjct: 328 NHNFDSA-----EGSMAKLVASETAVY-------VTDEAIQILGGNGYTRDYPVERMHRD 375

Query: 437 SPANSILLGS 446
           +   +I  G+
Sbjct: 376 AKIFTIFEGT 385


>gi|224824064|ref|ZP_03697172.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224603483|gb|EEG09658.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 385

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 59/246 (23%)

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGL 270
            DG + ++G K W      SD  I+LA+           EG +  F+V   L+    NGL
Sbjct: 141 KDGRWVVNGQKVWISRVQHSDLMILLARTTPLAEVQKKSEG-MSIFIVN--LQQAIGNGL 197

Query: 271 CYQRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILI 316
             + + N + + +N   EL F N               F ++L  LN         + LI
Sbjct: 198 TVRPIPNLVNHETN---ELFFDNLEIPEENLIGEEGKGFKYILDGLNAE-------RTLI 247

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDIAAATA 371
               A   +      +  A  YA  R     ++ D+P+ K       IA+  ++I AA  
Sbjct: 248 ----AAECIGDGYWFIDRATKYANER-----VVFDRPIGKNQGVQFPIAEAFIEIEAANL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + F+    FD  +    +A  A       KY   K +       M+  GG G+  E  I 
Sbjct: 299 MRFKACELFDAKQPCGAQANMA-------KYLAAKASWEAANVCMQTHGGFGFANEYDIE 351

Query: 432 RHYRES 437
           R +RE+
Sbjct: 352 RKFRET 357


>gi|325524058|gb|EGD02234.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 26/251 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   +    +K  DG Y LSG K F+S+  ++D  ++LA+         +
Sbjct: 123 FAVTEPDTGLDTTKLKVVAKKQPDGNYLLSGKKVFISTAQVADHMLILARTTP------I 176

Query: 259 PRLLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315
             + +      L Y +L  K +  R    +     +T    + D+ VS   +  E+ K L
Sbjct: 177 EEVKKHSEGLSLFYTKLDRKYVEIREIDKLGRAAVDTNELFIDDMPVSKDALIGEEGKGL 236

Query: 316 IY----LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366
            Y    +++  + V+  ++ +  A+      YA+ R V G  +     ++  +A    ++
Sbjct: 237 SYIFHGMNAERVLVAAEQIGIGRAVLKLATQYAKERVVFGRPIGQNQGVQHPLARNWAEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + F  A+ +D+      EA  A+++A       C+        ++   GG GY +
Sbjct: 297 EAANHMIFAAADLYDKGLPCGSEANAAKLLASEACMNACQT-------SILTHGGFGYAK 349

Query: 427 ERSIARHYRES 437
           E  + R  RE+
Sbjct: 350 EYHVERFMREA 360


>gi|325180577|emb|CCA14983.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 422

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 30/266 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D  ++ ++ +   D  + L+G K W  +
Sbjct: 142 FGSEQQKKKYLPKLATGELIGCFGLTEPNHGSDPGSMETRARAKGDS-FILNGSKNWITN 200

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
           +P++D  ++ A+  +G +  F++ + L      GL    +  K    ++AT  +   +  
Sbjct: 201 APIADVLLIWAKDDQGDIRGFILEKDLP-----GLATTYIDGKATLMASATGMIFMEDVQ 255

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
                +L ++    GP         L++A   +S   +  A+A +     Y   R   G 
Sbjct: 256 VPKDCMLQNVKGLKGPFS------CLNNARYGISWGALGAADACYEVARSYTLNRKQFGV 309

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD++ +I+       R+    DE +   E       +  + K   C  
Sbjct: 310 PLAANQLIQKKLADMSTEISIGLQSCLRVGRLLDEKRCPVE-------LISMVKRNSCGK 362

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A  +   A + +GG+G  +E  + RH
Sbjct: 363 ALDIARAARDMLGGNGLSDEYHVIRH 388


>gi|255319960|ref|ZP_05361160.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SK82]
 gi|262379644|ref|ZP_06072800.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255302980|gb|EET82197.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SK82]
 gi|262299101|gb|EEY87014.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 385

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 31/268 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252
           + LTE RGG+D A +  + ++  D  Y ++G K  +S +  +DA ++  +          
Sbjct: 124 IALTEPRGGSDAANLRLKIERDGDE-YIINGEKTSISVADQADASVVFGRTGANEDSAHG 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           V   LVP  L      G+   R     G R+     + F N        LGD N   G V
Sbjct: 183 VTALLVPMNLP-----GISTTRFDCH-GQRAIGRGSIFFDNVRVPINHRLGDEN--KGFV 234

Query: 310 EDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M+   +  + I    ++  RVSL EA  YA +R   G  L     +   +A+    + 
Sbjct: 235 QVMQGFDFSRALIGLQVLAVARVSLDEAWEYAAQREAFGQPLTAFQGVSHPLAEYETQVE 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L  +     D     + EA        + K+W  K+A  VI + +   G +GY  +
Sbjct: 295 AARLLCLQTLWLKDNHLPHTSEAG-------MCKWWGPKLAYDVIHQCLLTFGHAGY--D 345

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
           R +    R        +G G A ++  +
Sbjct: 346 RGVMEQ-RMRDVLGFQIGDGTAQIMKTI 372


>gi|159466250|ref|XP_001691322.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279294|gb|EDP05055.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 429

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI- 225
           H +       R   P  KA   P   T   +G L ++E   G+D+ ++  + +++  G  
Sbjct: 125 HSNLCVNQIVRNASPAQKAKYLPKLITGEHVGALAMSEPGSGSDVVSMKCRAERVGGGAD 184

Query: 226 --YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G+K W  + P ++  ++ A+ +   G   +   L +    G    +  +K+G R
Sbjct: 185 ERYVLNGNKMWCTNGPKANVLVVYAKTDPAAGPRGITAFLIEKGMKGFSTAQKLDKLGMR 244

Query: 283 SNATVELEFSN 293
            + T EL F N
Sbjct: 245 GSDTCELVFEN 255


>gi|146303061|ref|YP_001190377.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701311|gb|ABP94453.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 398

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 75/368 (20%), Positives = 146/368 (39%), Gaps = 54/368 (14%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR---------------------AARLYL 142
           H LLR +I D L   + +R  E   +    ++R                        L L
Sbjct: 19  HELLRTTIRDFLEREVQNRVEEGERKGDLGEVREKIKELGLNGLDVPQEYGGAGGDYLSL 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +   E    + PS+++  ++  M T  + + +  K     Y P    P+ +         
Sbjct: 79  LVATEEISRIWPSLSTFFLINWMFTSALLR-FGGKDIKERYVP----PVARGEKIAAFAN 133

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR---VG 254
           TE   GTD+A ++S  +K++ G Y L+G K F++S  ++D  I+ A+     E R   + 
Sbjct: 134 TEPGAGTDVAGMSSVAKKVNGG-YVLTGKKIFITSGDLADYIIVTARTSPPSEQRWKGIT 192

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V R      P      R+ +  G +++ T E+ F+      + + NV     +  K 
Sbjct: 193 MFVVERDF----PGFKVESRI-DTTGLKASHTTEISFNEV---KVPEENVVGEVGQGFKY 244

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   D A   V+   + + +A     + Y+  R   G  +    ++++ +++   D+  
Sbjct: 245 AVSSFDYARTIVASQALGIGQAALEKMVRYSMDRKSFGQSIAGFQMVQQKVSESMADLTT 304

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L +   + +     R  E  Y  + A + K++  + A  ++  AM   GG G     
Sbjct: 305 TRLLVYWAGSLY----KRGMENEYI-MAASLAKFFATEAAERIVLRAMTVHGGYGVTTST 359

Query: 429 SIARHYRE 436
            + R  R+
Sbjct: 360 GLERMLRD 367


>gi|41409286|ref|NP_962122.1| FadE24 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|254776441|ref|ZP_05217957.1| FadE24 [Mycobacterium avium subsp. avium ATCC 25291]
 gi|41398106|gb|AAS05736.1| FadE24 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 463

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++G+   F+V     + S  GL   +    +G R+ 
Sbjct: 249 YRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESSTKGLTV-KADPSMGIRAA 302

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
               +E S      G  LG+   +     +   L  L  A ++V      L   + Y + 
Sbjct: 303 ELGHVELSGVTVPLGARLGEDEATDDDYSEAIALSRLGWAALTVGTSHAVLDYVVPYVKE 362

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A   ++    + EAA A+ +     
Sbjct: 363 REAFGEPIARRQAVAFMCANIAIELDGLRLITWRGAARAEQGLPFAREAALAKRLG---- 418

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    + ++ ++ +GG GY +E  + R YR+
Sbjct: 419 ---ADKGMQIGSDGVQLLGGHGYTKEHPVERWYRD 450


>gi|326383102|ref|ZP_08204791.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198238|gb|EGD55423.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 393

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 30/300 (10%)

Query: 175 APKIFSREYDPTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           AP I     D   K  + K +       +G +E   GTD+AA+ +   K  D  Y ++G 
Sbjct: 99  APTIMHYGSDEQKKFFLPKIAAGDLHFSIGYSEPGAGTDLAALRTTAVKEGDE-YVVNGQ 157

Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNAT--- 286
           K W    P +D   +  + +        +  L+   +  G  Y  +    G  ++AT   
Sbjct: 158 KMWTSLIPYADYVWLACRTDPEASKHKGISMLIMPTTAEGFSYTPVHTMAGVDTSATYYQ 217

Query: 287 -VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            V +  +N  G   G  ++ T  +   ++      A+ S + ++ +L E I +A    V 
Sbjct: 218 DVRIPVTNRVGEEGGGWSLVTNQLNHERV------ALCSAAPIQTALRETIAFA-TTEVD 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  LIDQP ++  +A +   +     +++++A+      S S   A A      TK +  
Sbjct: 271 GRKLIDQPWVRANLARVHAKVEFLKLVNWKIASIAASGGSPSPADASA------TKVFGT 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHY-----RESPANSILL--GSGNAMVLDVLNLL 458
           + A       ME +G +  +   S   H      R S  + IL   G  N +  D++ +L
Sbjct: 325 EFATEAYRLLMEVVGPTATLRHGSPGAHLLGRLERFSRTSLILTFGGGTNEIQRDIIGML 384


>gi|289641973|ref|ZP_06474127.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508159|gb|EFD29104.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 408

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 21/266 (7%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF--IM 245
           P+ +  V   L ++E     G+D+  + +  +K   G + ++G K F++     AF   M
Sbjct: 136 PLARGEVRSSLAVSEPSPGAGSDLTMLRTTAEKAPGG-WKINGVKHFVTGADGAAFSICM 194

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302
            A   G    FLV    +  +P     +R+     +      E+ F + F     +LG++
Sbjct: 195 AATAGGGATIFLV----DQDNPGLTVGRRMPTLDHSAPGGHCEVTFDDCFVPDDAVLGEV 250

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSL-AEAIHYAR--RRHVSGGILIDQPVMKRAI 359
                  E ++  +     + S+S + V++ A  +  AR   R   G  +    + +  +
Sbjct: 251 GKG---FEQIQARLAPSRIMFSMSWLGVAIRAHEMAAARIVGREAFGAAVAGHGMAQAHV 307

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD  +DIAAA AL    A   DE   R   +  AR  + ITK +  +    V+   ++  
Sbjct: 308 ADNEIDIAAARALVHSTAAVIDE---RGALSGAARHASAITKTFVSEAVWRVLDRVVQLY 364

Query: 420 GGSGYIEERSIARHYRESPANSILLG 445
           GG G  E+  +AR   E+    I  G
Sbjct: 365 GGLGVCEDELVARFLVEARGFRIYEG 390


>gi|85858226|ref|YP_460428.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721317|gb|ABC76260.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
          Length = 381

 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 24/262 (9%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE-- 250
           S+  G  +TE   G+D  A + + + + DG  Y L+G K F++ +P++D  ++ A     
Sbjct: 120 SIVGGHAMTEPDSGSD--AFSMKTRAVRDGDRYILNGTKIFITNAPIADILLVFAVTNEQ 177

Query: 251 ---GRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              G V  F+V +       G P  L   R    IG       E+   N  G       +
Sbjct: 178 KKFGGVSAFIVEKGFPGFSVGKPFSLMGLR-SCPIGEVILQDCEVPAENRLGSEGAGSAI 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +E  +  ++       +  M   L + + YA+ R   G  + D   +   IAD+ +
Sbjct: 237 FNSEMEQERSCLFASQ----LGAMEKILEDCVQYAKARSQFGQPIGDYQAVSHKIADMRV 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  +  + +++A      K    E++ A++    +    C        +A++  G  GY
Sbjct: 293 RIELSRLILYQVAWMKASGKRAPVESSIAKLYVSESYVQTC-------MDALQIHGAYGY 345

Query: 425 IEERSIARHYRESPANSILLGS 446
             E  I R+ R+S A  I  GS
Sbjct: 346 STEFPIERNLRDSIAGKIYSGS 367


>gi|327310836|ref|YP_004337733.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326947315|gb|AEA12421.1| Acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 383

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 38/280 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------E 250
           I   L+E   G+D AAI ++ +K   G + ++G K W  S   +DA+++ A+        
Sbjct: 122 IAFALSEPCCGSDAAAIQTRAEK-RGGEWAINGVKLWITSGLYADAYLVAARTGPPELRH 180

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTF---GFLLGDLNVST 306
             +  FLV R     SP   C +    K+ G     T E++ ++       L+G LN   
Sbjct: 181 KSISLFLVER-----SP---CVEVSPVKVMGVHGTGTAEVKLNDCRVGDEALVGRLN--- 229

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHY-----ARRRHVSGGILIDQPVMKRAIA 360
              E  ++++  L++    V  + + +AEA         ++R   G  + D  +++  +A
Sbjct: 230 ---EGFQVVLDDLNNGRTCVGAIGLGIAEAAFAEAYAYTKKRTAFGKPIADFQIVQHYLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +I     A   + +  A   D     +++ A+  + A + K    ++A      AM+ +G
Sbjct: 287 NIHAQTEAVKHVVYTAALYRD-----TKDPAFP-MYAQLAKVLASRLAVDATRTAMQVMG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY  +  +   YR++ A  I  G+   ++  +   LEK
Sbjct: 341 GFGYSTDSKVEMLYRDAKATEIYEGANEVIMNTIYRFLEK 380


>gi|271965426|ref|YP_003339622.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270508601|gb|ACZ86879.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 396

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 94/249 (37%), Gaps = 51/249 (20%)

Query: 221 ISDGIYCLSGHKWFLS-----------------SPMSDAFIMLAQVEGRVGCFLV---PR 260
           +  G + ++GHKWF +                 +P   AF M+       G  +V   P 
Sbjct: 147 LDGGEWVINGHKWFTTGADRAAYTTVMCRTEPDAPPHLAFSMILVPTDTPGYTIVRDTPV 206

Query: 261 LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L  DG    + Y+ ++    N +G R             GF++    +  GP      + 
Sbjct: 207 LGIDGGHCEVRYEDVRVPASNLLGPRGQ-----------GFVIAQRRL--GPGRIFHCMR 253

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           +L  A  +   M   L E       R VSG  L  + +M+R + D   +I +A  L+   
Sbjct: 254 WLGQAQRAFDLMCRRLNE-------RSVSGRPLAGKQLMRRHVFDSYTEIQSARLLTLNA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ D       +   AR+     K    +M   VI  A++  G +G   +  + R YR 
Sbjct: 307 AHAID-------QGGQARVEIGAVKVAAARMLHNVIDRAIQVYGAAGLTADTPLERMYRR 359

Query: 437 SPANSILLG 445
           + A  I  G
Sbjct: 360 ARAGRIYDG 368


>gi|159029975|emb|CAO90354.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1264

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 23/238 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            G+TE   G +I AI++    + DG        +   +G  W   + M + F+ L   E 
Sbjct: 710 FGMTEPEAGANIGAISTVA--VPDGRDKWRIRGLKRWNGSAW---AGMINVFVRLLDSEE 764

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
                L   L+  G+P GL        +G R      + F +   T   LLG+L   T P
Sbjct: 765 PGNNGLTGFLVRQGTP-GLRLGPESLTMGLRGIMQNAIYFEDVLVTKEQLLGELGNGTEP 823

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +D  +   L   +M V GM+  L   + YA RR ++ G L++ P+       +     A
Sbjct: 824 ADDALLYARLGIGMMGVGGMKRCLQLMLRYASRRSIATGKLLESPITLARFDHLTGATVA 883

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++L   +  + D      ++ A  R MA I K              ++ +GG GY+E
Sbjct: 884 LSSLLKCITTALD------QKVAVPREMAVIAKITGADYLWEAADSLVQMLGGRGYME 935


>gi|213965060|ref|ZP_03393258.1| putative acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
 gi|213952174|gb|EEB63558.1| putative acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
          Length = 403

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 13/160 (8%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D +A+++   K+    Y ++G K F+++   SD+ ++ A ++   G   +
Sbjct: 133 MAITEPSFGSDSSAVSTTA-KLDGDEYVINGEKIFVTAGERSDSVVVWATLDKSKGRAAI 191

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313
              L++ G+P G   +RL+ K+G RS+ T  L   N     +   N+   P  D+K    
Sbjct: 192 KSFLVKKGTP-GFTVERLEEKLGIRSSDTAVLRLDN---VRVPKENLLGSPEIDVKKSFA 247

Query: 314 -ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID 351
             +   D+    V+GM + ++ A +   RR     GI ID
Sbjct: 248 GAMATFDNTRPLVAGMAIGVSRASLEELRRILEEAGIEID 287


>gi|86751210|ref|YP_487706.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574238|gb|ABD08795.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 415

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +  +A+  AR R   G  L ++  ++  +A+  +D+  +  + ++ A   D+     +
Sbjct: 286 RWAQTQAVKRARARETFGKPLSERQAIQWMLAESEMDLEQSRLMVYKTAWMLDQGLDARK 345

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA  +  AP+     C+    VI  A++  GG G ++E    + Y +S    +  G+  
Sbjct: 346 EAAMVKCFAPLA---ACR----VIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTE 398

Query: 449 AMVLDV 454
            M + +
Sbjct: 399 VMKMTI 404


>gi|239607997|gb|EEQ84984.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 428

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 97/279 (34%), Gaps = 49/279 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-------------DGIYCLSGHKWFLSSPMSDAFIML 246
            GLTE + G+D   + +  + +              DG       KW   +      I+ 
Sbjct: 104 FGLTEPKHGSDATFMETAARPVQREYPAGSGAANAVDGFVINGAKKWQTGAHNCTHMIIF 163

Query: 247 AQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGF 297
           A+  G  G       FLVPR  E    N L Y+   N   + +   +E  F   S   G 
Sbjct: 164 ARTSGAPGSARGITAFLVPR--ETPGVNILSYEWTLNMPTDHATVALEDVFVPRSAVLGE 221

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVM 355
           L   L ++   V + +I      A  S    R  L +AI YA  R +   G  L D   +
Sbjct: 222 LDRGLAIAQTFVHENRI----RQAASSCGAARFCLDKAIEYANEREIWGKGKTLSDNQAI 277

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSR----------SEEAAYARIMAPIT----- 400
           +  + ++   +     L  R     D+  +             +  +  I   +T     
Sbjct: 278 QFQVVELMTQVEMLRLLILRTGWEMDQVTAECGGHIDSPVPGSKKPWVEIEKRLTHKVAM 337

Query: 401 -KYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
             +W  ++       A++  GG+GY   +    I RH+R
Sbjct: 338 CNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFR 376


>gi|111221420|ref|YP_712214.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111148952|emb|CAJ60631.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 387

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 31/279 (11%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA--------Q 248
           I   L+E+  G+D A++ ++ +   D  + L G K W  ++ +S  + ++A        +
Sbjct: 125 ISYALSEREAGSDTASMRTRARLDGDH-WVLDGTKTWITNAGVSTWYTVMAVTDPHATKK 183

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G +  F+V R        G      + K+G + + T E+  +   G  +    +   P
Sbjct: 184 ADG-ISAFVVHR-----DDPGFEVGSKERKLGIKGSPTREIHLT---GCTIPADRIIGEP 234

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362
              ++  L  LD    ++    V +A+     A+ Y ++R   G  + D   ++  +AD+
Sbjct: 235 GTGLRTALATLDHTRPTIGAQAVGIAQGALDAALAYVKQRRQFGRAIADNQAVQFMLADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + I AA  L +  A     A++   E     + A   K +   +A  V  +A++  GG+
Sbjct: 295 GMKIEAARHLVYVSA-----ARAERGEPNLGFVSAA-AKCFASDVAMEVTTDAVQLFGGA 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 349 GYTRDFPVERMMRDAKITQIYEGTNQVQRVVMSRALLKG 387


>gi|330793569|ref|XP_003284856.1| hypothetical protein DICPUDRAFT_75815 [Dictyostelium purpureum]
 gi|325085252|gb|EGC38663.1| hypothetical protein DICPUDRAFT_75815 [Dictyostelium purpureum]
          Length = 638

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 24/237 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF---LSSPMSDAFIMLAQVEGRVG 254
           +G+ +TE   G+D  A+ S+  K  +G + L+G K F   L         +L +    + 
Sbjct: 118 VGIVITEPTSGSDFQAMKSKSVKNENGDFILNGEKRFNARLKQATHIILYVLNEDGPSIN 177

Query: 255 CFLVP---RLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            FLVP   + LE  S N  GL    L N  G  S   + +       +L+G  N   G  
Sbjct: 178 VFLVPINHKGLEIKSFNAQGL----LGNSFGGVSFKDMHVPKE----YLIG--NQGDGVA 227

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
              K  +Y  L  +  ++   + +L +A      R   GG +     +++ +A     + 
Sbjct: 228 IFHKHFLYWRLMQSAAAIGTGKCALDQAASRMLSRDAFGGPIGRFTHLQQDLAQHTAKLY 287

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             + L  ++A  FDE  S  E + Y     P+ K  C + A +    +ME  G  GY
Sbjct: 288 MGSLLVEKIATMFDEGASFKEISKY----VPMAKAECIEFALSACDWSMEIHGADGY 340


>gi|302784406|ref|XP_002973975.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
 gi|300158307|gb|EFJ24930.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
          Length = 415

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 20/239 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D +++++   K   G + L+G K W  +S  +D  ++ A+     ++  F+V
Sbjct: 156 LTEPDYGSDASSLSTTATKAKGG-WVLNGQKRWIGNSTFADVAVIFARNTETNQINGFIV 214

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +    G+P G    +++NKIG R     ++   + F     D         D   ++ +
Sbjct: 215 RK----GTP-GYRATKIENKIGLRIVQNGDIVLKDAF-IPDDDRLPGINSFADTNKVLAI 268

Query: 319 DSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              +++    G+ + + +  H Y   R   G  L    + +  +  +  +I A   + +R
Sbjct: 269 SRIMVAWQPIGVTMGVYDMCHRYLLERKQFGAPLASLQINQEKLVQMLGNIQAMALVGWR 328

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           L   +D  K    +A+ A       K W  K A   +A   E +GG+G + +  +A+ +
Sbjct: 329 LCKLYDSGKMTPGQASLA-------KCWNTKRARETVALGRELLGGNGILVDFLVAKAF 380


>gi|25029333|ref|NP_739387.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259505665|ref|ZP_05748567.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23494621|dbj|BAC19587.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259166747|gb|EEW51301.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 980

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 27/257 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      A+G  GLTE   G++ AA+ +  ++   G + L+G K W   + ++D  I+ A
Sbjct: 701 PRMARGEAVGCFGLTEPTAGSNPAAMKTFARQEPGGDWVLNGTKRWIGLANIADVAIIWA 760

Query: 248 QVE----GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFL 298
           Q E    GR V  F+VP         G   Q ++ K+  R++   E+   +        L
Sbjct: 761 QTEEFGDGRGVRGFVVPT-----DTPGFSAQVIEPKLSMRASVQCEITLEDVRLPYTAML 815

Query: 299 LGDLNVS-TGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             D  V   GP   +    Y    +  V G  R S   A+ Y+  R   G  L    + +
Sbjct: 816 PKDSAVGLRGPFSCLNEARY--GIVWGVLGAARDSFNSALEYSHHREQFGTPLTHFQITQ 873

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I     L+  +    D      E       M    K    ++A  +  +A 
Sbjct: 874 TKLADMAVAINKGYHLAHHIGRLKDTTGVTPE-------MISTGKLDNTRIAIQIARDAR 926

Query: 417 ECIGGSGYIEERSIARH 433
             +GG+G   + S  RH
Sbjct: 927 AMLGGNGISMDYSPLRH 943


>gi|304309874|ref|YP_003809472.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301795607|emb|CBL43806.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 400

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 23/287 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGG--TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIML 246
           P+    V     +TE  GG  +D +   ++ +K  D ++ ++G KWF++ +  +  FI++
Sbjct: 122 PLINGEVRSAFAMTEPEGGCGSDPSLTYTRAEKHGD-VWRINGRKWFITGAEGAQTFILI 180

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+        L   L +   P     +R+            EL F N     + D N   
Sbjct: 181 ARTSNEDRRQLTAFLFDAQQPGWRIERRIPIMGPEEHGGHCELVFEN---LEIPDQNRLL 237

Query: 307 GPVEDMKIL-IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
              + +K+  I L +A ++     + LA+     A  Y R R   G  L     ++  + 
Sbjct: 238 NVGDGLKVTQIRLGTARLTHCMRWLGLAKRCMEIAAEYTRERMSFGIPLAQHEGVQWMLG 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I     L+   A   D+     +E + A+I    T +            A++  G
Sbjct: 298 DVAKNIHTGRLLTMHAAWKLDQGDFARKEISMAKIHVADTLHQAADT-------AIQLCG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSG--NAMVLDVLNLLEKGTNLF 465
             GY  +  +   YR +    ++ G+   + MVL     LE+G + F
Sbjct: 351 AKGYSRDTLLEWIYRYARQARLVDGASEIHKMVLS-RAYLEEGADFF 396


>gi|326780207|ref|ZP_08239472.1| Glutaryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326660540|gb|EGE45386.1| Glutaryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 406

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 28/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D A + +  ++  +  + L+G K W  +
Sbjct: 124 FGSEEQKLRWLPAMASGEIIGCFGLTEPDHGSDPAGMRTYAKRDGED-WILTGRKMWITN 182

Query: 237 SPMSDAFIMLAQVE----GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-- 289
             ++   ++ AQ +    GR +  F+VP         G     + +K   R++ T EL  
Sbjct: 183 GSVAGVAVVWAQTDEGADGRGIRGFVVPT-----DTPGFSAPEIHHKWSLRASVTSELVM 237

Query: 290 -EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSG 346
            E       +L D +   GP   +  L +    I+  S+   R S   A+ YAR R   G
Sbjct: 238 DEVRLPADAVLPDASGLRGP---LSCLSHARYGIVWGSMGAARASFESALDYARGREQFG 294

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    + +  +AD+A+++     L+  L    D    R E+ ++ ++         C+
Sbjct: 295 RPIGGFQLTQAKLADMAVELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICR 354

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +       +G +G   E  + RH
Sbjct: 355 TSRTI-------LGANGISLEYPVMRH 374


>gi|256783763|ref|ZP_05522194.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 379

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 47/270 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + ++E   G+D+ A+  + ++ +DG + + G K ++S+      I+L           
Sbjct: 122 LSIAMSEPEAGSDVGALRCRARRAADGTWLIDGQKTWISNAHCARSILL----------- 170

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-------FLLG---DLNVSTG 307
           V R  ED    GL    L           VE+   +T G       FL G     +   G
Sbjct: 171 VARTGED-KHGGLTMFHLPA-----DTPGVEVRGIDTMGGREVNDVFLTGVRLPADAVVG 224

Query: 308 PVED-----MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            V+D     M  L    ++L S ++ ++  R +  +A+ Y R R   G  +     ++  
Sbjct: 225 QVDDGWRQLMAGLNHERLFLASNMLGLA--RRAFDDALGYVREREQFGRPVGSFQALRHR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +AD+A +I     L   +A   D    R    EA+ A++ A        ++A     E M
Sbjct: 283 VADLATEIECTRLLVREVALDCDAQPDRLFPREASMAKLKA-------TEVAKRAALEGM 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  E  + RH R +  +++  G+
Sbjct: 336 QMMGGYGYTTEFDMERHLRAAVVSTVYGGT 365


>gi|242238831|ref|YP_002987012.1| acyl-CoA dehydrogenase [Dickeya dadantii Ech703]
 gi|242130888|gb|ACS85190.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 383

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 28/267 (10%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEGR 252
           A  L LTE   G+D ++ ++   + +  +Y L+G K F++      ++++     + +  
Sbjct: 119 AYALALTEPGAGSDNSSASTSYTRKNGKVY-LNGQKTFITGAKEYPYMLVLARDPEPKDP 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNV 304
              F +   +E   P G+    L +KIG    +T       VE++ S+  G   +G LNV
Sbjct: 178 KKAFTL-WWVESNKP-GIKINPL-HKIGWHMLSTCEVYLDNVEVDESDMVGEEGMGFLNV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                 +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +A +A+
Sbjct: 235 MYNF--EMERLI---NAARSAGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAI 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I     +  ++A   D  +S        R  A + K +C + +  VI +A++ +GG GY
Sbjct: 290 KIENMRNMVMKVAWQADMHQS-------LRTSAALCKLYCARTSLEVIDDAIQIMGGLGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            ++  ++R +R+     I  G+   M+
Sbjct: 343 TDDARVSRFWRDVRCERIGGGTDEIMI 369


>gi|213622386|ref|ZP_03375169.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 243

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 20/238 (8%)

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G   L+G K F++S     +I++   +G      +      D S  G+   +L+ K+G 
Sbjct: 7   NGKVYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKLE-KLGL 65

Query: 282 RSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           R ++  E+ F +        FG      N      +  + L+    A+ +      +  +
Sbjct: 66  RMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLV----ALTNYGTAMCTFED 121

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA +R   G  +    +++   A +A+ + +       + N   EA  +++      
Sbjct: 122 AARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS-------MKNMLLEAAWKADNGTITS 174

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             A + KY+C   A  V+  AM+ +GG G      I R +R+   + +  GS    +L
Sbjct: 175 GDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQIL 232


>gi|217978807|ref|YP_002362954.1| Acyl-CoA dehydrogenase type 2 domain protein [Methylocella
           silvestris BL2]
 gi|217504183|gb|ACK51592.1| Acyl-CoA dehydrogenase type 2 domain protein [Methylocella
           silvestris BL2]
          Length = 389

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 67/308 (21%)

Query: 180 SREYDPTNKAPMQKTSVAIG-----------LGLTEKRGG--TDIAAITSQGQKISDGIY 226
           S  Y PT +  +  T+V  G           LG T  RGG    +A  T QG       +
Sbjct: 96  SAAYPPTLRERIFHTAVGDGALINNLRVEPELG-TPARGGLPATLARRTPQG-------W 147

Query: 227 CLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            LSGHK F +   + A    F    + + RVG F+VP     G+P GL  +     +G R
Sbjct: 148 SLSGHKTFATGCPALAWHAIFARTDEPQPRVGIFVVPA----GAP-GLRIEESWRHLGMR 202

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSV------SGM-R 329
           ++A+ ++        +L D+N+      ++ +  +        +A +SV       G+ R
Sbjct: 203 ASASHDV--------ILEDVNIPEDHAAELVLAEHASGPDAFQAAWLSVLFSTVYDGVAR 254

Query: 330 VSLAEAIHYARRRHVS--GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           V+    + + R R  +  G  L   P M+ A+  I   +  + AL  +     D   + +
Sbjct: 255 VARDWFVGFLRDRRPANLGAPLASLPRMQEALGAIDAALYVSRALLDQHVERVDRGDTPA 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE-------SPA- 439
           ++ +Y        K+     A   +++A+E  G  G  +   + RHYR+       SP  
Sbjct: 315 QQDSY------YLKHAVTANALKAVSKALEVSGNPGLSQVNPLERHYRDILCARVHSPQD 368

Query: 440 NSILLGSG 447
           +SIL+G G
Sbjct: 369 DSILVGGG 376


>gi|146303059|ref|YP_001190375.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701309|gb|ABP94451.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 387

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 38/279 (13%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-----SDAFIMLAQVEGR 252
           +G+  TE  GG+D+A I +   +  D  + L+G K ++S  +         + LA+    
Sbjct: 121 LGVASTEPTGGSDVAGIRTLATR-RDRKFVLNGQKIYISGVLEAYNWGGGHLTLAKTNPE 179

Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304
            G      F VP      S  G+   +++N +G    +T  + + N     G L+G+LN 
Sbjct: 180 AGHRGISMFFVPT-----STQGIEISKIEN-MGRMGISTGTMRYVNAEVPEGNLVGELNR 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAI 359
                 D       + A + V+G  +  AEAI      Y ++R V    L D   +    
Sbjct: 234 GFYYAMDG-----FNHARVLVAGACIGAAEAILEMGLEYVKQREVFSTKLKDFEAIAFEA 288

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++   +  A  L+++ A   D   +  E A    ++A ++K    ++A  +    M  +
Sbjct: 289 AELKTRLEMAKLLNYKAAWMMDREPNSDETA----MLAAMSKLTAPQVAFDIAKSVMMWM 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G  GY ++  +   +R     S L+G+  AM  +V+ L+
Sbjct: 345 GAYGYSKDALVEMGFR--GIVSYLVGAEGAM--NVMKLI 379


>gi|289706824|ref|ZP_06503167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289556509|gb|EFD49857.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 400

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 25/259 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQ 248
           P+ + ++  G  LTE   G+D  ++ +  +  + G + L+G  KW  +       I+ A+
Sbjct: 132 PVARGTLPGGFALTEPLHGSDSVSLETSARPDAAGGWVLNGAKKWIGNGAAGGITIVWAR 191

Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----L 302
              +G+V  F+V    E  +P G   + +  K   R+    E+  ++     +GD     
Sbjct: 192 DTEDGQVKGFVV----EQSTP-GYEAEVITGKGALRAIHQAEITLTD---VRVGDDARLP 243

Query: 303 NVSTGPVEDMKILIYLDSAI-MSVSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIA 360
           NV+T   +  ++L+     +  S  G   ++ EA + YAR+R   G  L    +++  +A
Sbjct: 244 NVATFK-DAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLAAHQMVQERLA 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  ++ A       +A      + R E+A+       + KY C + A  V   A + +G
Sbjct: 303 QMLDEVTAMQTRCVAVARLQAAGRLRDEQAS-------LLKYACTRGARRVAQIARDMLG 355

Query: 421 GSGYIEERSIARHYRESPA 439
           G+G + E  + RH+ +  A
Sbjct: 356 GNGILLEHRVMRHFADVEA 374


>gi|302415467|ref|XP_003005565.1| acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261354981|gb|EEY17409.1| acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 604

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 43/278 (15%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           I L +TE   G+D+A ++ + +   DG  + ++G K ++++     +   A   G  G  
Sbjct: 328 ICLAITEPDAGSDVANLSCEAKLTEDGKHFIVNGEKKWITNGKWARYFTTAVRTGEPGMN 387

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312
            V  LL +    G+  +++  + G  S+ T  + F         D+ V   PVE++    
Sbjct: 388 GVSLLLIERDFPGVTTRQMDCQ-GVWSSGTTYITFE--------DVKV---PVENLLGKK 435

Query: 313 -----KILIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 I+   +       I  +   RV  +E++ YA +R   G  LI+ PV++  +A +
Sbjct: 436 DRGFRAIMTNFNHERIGIIIQCLRFSRVCYSESVSYASKRRTFGKKLIEHPVIRLKLAHM 495

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIA 413
           A  I A+      L N   + +   E  A  ++          + +T  +C + A  +  
Sbjct: 496 ARQIEASYNW---LENLMFQCQKMGETEAMLKLGGAIAGLKAQSTVTFEFCAREASQIFG 552

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                 GG G      + R YR+  A +I  GS   M+
Sbjct: 553 GLSYSRGGQG----GKVERLYRDVRAYAIPGGSEEIML 586


>gi|295839022|ref|ZP_06825955.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697636|gb|EDY44569.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 395

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 12/222 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P      AIG  GLTE   G+D   + ++ ++  DG  + L G K W  
Sbjct: 118 FGSEEQKREWLPRMAAGEAIGCFGLTEPDHGSDPGGMRTRARR--DGSDWVLDGRKMWIT 175

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A+ E  V  F+VP         G     L +K   R++ T EL      
Sbjct: 176 NGSVASVAVVWARTEEGVRGFVVP-----ADTPGFSAPPLAHKGSLRASVTSELLLDGVR 230

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L      I+  ++   R     A+ YA+ R   G  L    
Sbjct: 231 LPADAVLPGVTGLRGPLSCLNEARYGILWGALGAARTCFRTALAYAKEREQFGKPLAGFQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +  +AD+A+++   T L+  L    D    R E+ +  ++
Sbjct: 291 LTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQVSLGKL 332


>gi|325520423|gb|EGC99535.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 49/261 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   +++Q ++  D  Y LSG K W  ++ +++  +++A+         V
Sbjct: 124 FAVTEPDAGLDTTHLSTQARRDGDH-YVLSGRKIWISTAQVANRMLIIART---TPLDAV 179

Query: 259 PRLLEDGSPNGLCYQRLK---------NKIGNRSNATVELEFSN--------------TF 295
            R  +  S   L Y  L           K+G ++  +  L   N               F
Sbjct: 180 ARPTDGLS---LFYTELDRAHVEVREIEKMGRKAVDSNMLFIDNLRVPRDDLIGNEGEGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +LL  LN         +ILI  ++  +  + +R     A  YA+ R V G  +     +
Sbjct: 237 RYLLHGLNPE-------RILIAAEAIGLGQAALR----RATQYAQERVVFGRPIGQNQAI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A   + + AA  +  + A  +D  +S   EA  A+ +     +  C+ A A +   
Sbjct: 286 QHPLAQAWMQLEAAWLMVMKAATRYDAGQSCGAEANAAKYLGAEAAFQACQTAVATL--- 342

Query: 416 MECIGGSGYIEERSIARHYRE 436
               GG GY +E  + R+ RE
Sbjct: 343 ----GGMGYAKEYHVERYLRE 359


>gi|289767645|ref|ZP_06527023.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289697844|gb|EFD65273.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 47/270 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + ++E   G+D+ A+  + ++ +DG + + G K ++S+      I+L           
Sbjct: 123 LSIAMSEPEAGSDVGALRCRARRAADGTWLIDGQKTWISNAHCARSILL----------- 171

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-------FLLG---DLNVSTG 307
           V R  ED    GL    L           VE+   +T G       FL G     +   G
Sbjct: 172 VARTGED-KHGGLTMFHLPA-----DTPGVEVRGIDTMGGREVNDVFLTGVRLPADAVVG 225

Query: 308 PVED-----MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            V+D     M  L    ++L S ++ ++  R +  +A+ Y R R   G  +     ++  
Sbjct: 226 QVDDGWRQLMAGLNHERLFLASNMLGLA--RRAFDDALGYVREREQFGRPVGSFQALRHR 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +AD+A +I     L   +A   D    R    EA+ A++ A        ++A     E M
Sbjct: 284 VADLATEIECTRLLVREVALDCDAQPDRLFPREASMAKLKA-------TEVAKRAALEGM 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  E  + RH R +  +++  G+
Sbjct: 337 QMMGGYGYTTEFDMERHLRAAVVSTVYGGT 366


>gi|194290086|ref|YP_002005993.1| acyl-CoA dehydrogenase family protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193223921|emb|CAQ69930.1| Putative acyl-CoA dehydrogenase family protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 389

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 35/251 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D+AA+    +   DG  Y + G K W  +  ++D + +  +     G   + 
Sbjct: 130 LSEPDAGSDVAAMQCSAKLSEDGSHYVIDGAKTWISNGGIADFYCVFVRTGEAPGARGIT 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYL 318
            L+ D    GL      + +     AT+  +      G  LG+        +  K+    
Sbjct: 190 ALVVDADTPGLTIAERIDVMAPHPLATLRFDQCRVPVGNRLGEAG------QGFKV---- 239

Query: 319 DSAIMSVSGMRVSLAEA------------IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             A+M++   R S+A A            +  AR R + GG+L D  + + AI D+A  I
Sbjct: 240 --AMMTLDIFRASVAAAALGFGRAALDDALARARARPMFGGVLADLQLTQAAIGDMATAI 297

Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            AA  L++R A   D    R + EAA A+++A        + A  VI  A++  GG G  
Sbjct: 298 DAAALLTYRAAWLRDVKGQRTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVR 350

Query: 426 EERSIARHYRE 436
               +   YRE
Sbjct: 351 VGTRVESLYRE 361


>gi|226364085|ref|YP_002781867.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242574|dbj|BAH52922.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 25/271 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+      I + LTE   G+D +A+T+    +  G + L+G K  +S  M + A ++ A+
Sbjct: 113 PLISGEQTIAIALTEPGSGSDASALTTTATAVEGG-WRLNGEKTAISWAMNATAALVYAR 171

Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
             G      V CF+VP   E     G+    +   +G        +  S+ F     L+G
Sbjct: 172 EPGSSRARGVSCFVVPLDAE-----GVTVSHMPG-MGCLPLGWGSIHLSDVFIPESHLVG 225

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +L      V D          +M +   + SL EA  YA++R   G  L +   +    +
Sbjct: 226 ELGRGFHSVMDHFDFSRAALGLMCLGAAKQSLEEAAAYAQQRETFGQPLSEHQGLAFQFS 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + A  +  A  + +R       A    E A     +A ++K+W    A   I  AM   G
Sbjct: 286 EHATYLEGARWICYR-------ALWLRETAQPHTALASMSKWWPPVAAKNAIEFAMRVHG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451
             GY  E  + + YR+    + L+  G A +
Sbjct: 339 NLGYSTESPLQQRYRD--VTAYLVADGTAEI 367


>gi|52546176|dbj|BAD51727.1| acyl-CoA dehydrogenase-family protein [Pseudomonas putida]
          Length = 412

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 27/254 (10%)

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLL 262
           +R G  +A + ++  +  D  Y ++G K+F +  +   +I +  V  +GR    +VPR  
Sbjct: 143 ERNGKHVADLQTRITRDGDD-YVVNGQKFFSTGALVAHWIPIVSVDEQGRPHLAVVPRET 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           E     GL      +  G R+ A+       V ++ S            + G      I 
Sbjct: 202 E-----GLKVINDWSSFGQRTTASGTVLIEQVRVQASQVVPIWQAFDRPTAGGAISQFIQ 256

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRH---VSGGI--LIDQPVMKRAIADIALDIAAAT 370
             +D+ +      R +LA+ + Y RR     +  G+    D P + + + D+ + + AA 
Sbjct: 257 AAIDAGLA-----REALADTLDYVRRHTRPWIDSGLEKATDDPYILQQLGDLQIRLRAAE 311

Query: 371 ALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A+    A++ D A +  SEE+ A A I     K    ++A        E  G    +EE 
Sbjct: 312 AVLDLAADAIDLAIREPSEESVAEASIRTAEAKVLTTEVAILASNRLFELAGTRSTLEEY 371

Query: 429 SIARHYRESPANSI 442
           S+ RH+R +  +++
Sbjct: 372 SLDRHWRNARVHTL 385


>gi|238062799|ref|ZP_04607508.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884610|gb|EEP73438.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 387

 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 21/269 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A++T++  +  D  + L+G K W  ++ +S+ + + A  +       +  
Sbjct: 131 LSEPEAGSDAASMTTRAVRDGDH-WVLNGVKRWITNAGVSEFYTVFAVTDPTARSKGISA 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIY 317
            + + S  G+ +   + K+G + + T E+   +    +  D  +    TG    MK    
Sbjct: 190 FVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDSV--RIPADRMIGAEGTGFATAMKT--- 244

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD   ++++   V +A+     A  Y + R   G  + +   ++  +AD+ + + AA  L
Sbjct: 245 LDHTRVTIAAQAVGIAQGALDYAKGYVQERRQFGKAVAEFQGIQFMLADMGMKLEAARQL 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  A      KS   +A      A   K +    A  +  +A++ +GG GY  +  + R
Sbjct: 305 TYAAAG-----KSERGDADLTYFGA-AAKCFASDAAMEITTDAVQLLGGYGYTRDYPVER 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461
             R++    I  G+     + +   L +G
Sbjct: 359 MMRDAKITQIYEGTNQVQRIVMARQLLRG 387


>gi|328887272|emb|CCA60511.1| acyl-CoA dehydrogenase, short-chain specific [Streptomyces
           venezuelae ATCC 10712]
          Length = 389

 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 27/267 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248
           P+ +   A    LTE+  G+D+  +T+      DG Y L+G K F S+ P +D  +++A+
Sbjct: 127 PVVRGERACCFSLTEEDAGSDVRRMTTTATPDGDG-YVLNGKKVFSSAAPFADFAVVVAR 185

Query: 249 VEGR---VGCFLVP------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           + G       FLV        +L+   P  +  Q+++   G+    +  +  +N  G + 
Sbjct: 186 MAGEEDTYSAFLVDLDTPGCTVLDGEVP--MSGQQME---GDLLFESCRVPAANLLGEIG 240

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L +  G +  +  L++  S I      R +   ++ YA  R V G  L+    ++  I
Sbjct: 241 QGLRIGIGRI-TLNRLLHCPSLI---GAARRAWDLSVEYAMNRVVFGRPLLAHQAIQHKI 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A +I AA ++    A   D     S EA   ++    T   C + A     +A++  
Sbjct: 297 ADMATEIYAARSMVTATAVKADRGDDISVEANMCKL---FTSEACFRAAD----QAVQIH 349

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           G +G      + + +R      I+ G+
Sbjct: 350 GKAGLTRGHEVEQIFRSLRMFRIVTGT 376


>gi|313110028|ref|ZP_07795932.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310882434|gb|EFQ41028.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 429

 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 63/307 (20%), Positives = 120/307 (39%), Gaps = 43/307 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG---LGLTE 204
           A  L+ P +++A+ +    +P     W P   S E  P     + + S+      L    
Sbjct: 153 AAALLVP-LSAANCIRRWGSPSQQAQWLPAFVSEEGAPLTAIAVNEPSLLFDPQKLATRA 211

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +R G+                Y LSG K   L    +   I+ A+ +     FLV     
Sbjct: 212 RRKGSH---------------YLLSGEKCLVLRGLEASRLIVAAKTDEGPALFLV----- 251

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           + S  G+  +R +  +G ++  T  L   +    +  D  ++    E      +LD A +
Sbjct: 252 EASAKGV-ERRAEPAMGLKAGGTARLRLKSVK--VPADNRLAA---EHFDYRAFLDHAAL 305

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               + +   +A     I Y   R   G  +  +  +   +ADIA+++ A   + +R   
Sbjct: 306 VWCALALGTGQAALDYVIAYCNEREAFGEPISHRQGVAFMVADIAIELDAMRLMVWRACA 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +  +    EA  AR++       C + A  +  +A++ +GG G+ +E    R YR+  
Sbjct: 366 LAERGQPFQREAYLARLL-------CAEKAMKIGTDAVQLLGGHGFTKEHPAERWYRDLR 418

Query: 439 ANSILLG 445
           A +++ G
Sbjct: 419 AVALMAG 425


>gi|300782926|ref|YP_003763217.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792440|gb|ADJ42815.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 385

 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 29/274 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           L+E+  G+D A++ ++ +   D  + L+G K W  ++  S  + ++A  +         +
Sbjct: 127 LSEREAGSDTASMRARARLDGDH-WVLNGTKCWITNAGESSWYTVMAVTDPDAEKKANGI 185

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V +        G      + K+G + + T E+ F N     + +  +   P   +K
Sbjct: 186 SAFVVHK-----DDPGFSLGPKEKKLGIKGSPTREIYFENC---TIPEDRIIGEPGTGLK 237

Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             L  LD    ++    + +A+     A+ Y + R   G  + +   ++  +A++   I 
Sbjct: 238 TALRTLDHTRPTIGAQALGIAQGALDAAVAYVKDRKQFGKSIAEFQGVQFMLAEMGTKIE 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A + +    R      A  MA   K +   +A  V  +A++  GG+GY  +
Sbjct: 298 AARHLVYASAAASERGDKR------AGFMASAAKTYASDIAMEVTTDAVQLFGGAGYTRD 351

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             + R  R++    I  G+     + +   L KG
Sbjct: 352 FPVERMMRDAKITQIYEGTNQIQKVVMARALLKG 385


>gi|257791581|ref|YP_003182187.1| crotonobetainyl-CoA dehydrogenase [Eggerthella lenta DSM 2243]
 gi|317488007|ref|ZP_07946589.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325833257|ref|ZP_08165763.1| crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|257475478|gb|ACV55798.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912909|gb|EFV34436.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325485639|gb|EGC88107.1| crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 383

 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 19/257 (7%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D+ A+ +  ++ +  IY L+G K F++S     ++++               L
Sbjct: 126 TEPGAGSDVGALATTYKRENGKIY-LNGTKTFITSSAGVKYLVIMAKNADDPTMFTEFFL 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNA-------TVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           +   P G+    L  K+G R ++        VELE  + FG    + N     V D    
Sbjct: 185 DMSKP-GVKLSPL-TKLGLRMDSCCEVYMDNVELEEKDIFG---KEGNGFMRGVSDFNFE 239

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            +L  A    + +  +  +A+ +A  R   G  +    + +  I D+ + +     + + 
Sbjct: 240 RWLVGACDYGTAI-CAFEDAMAHANSRIAFGKPISRFQLNQIKITDMCIKLTNMKNMLYE 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D      + AA     A + KY+C   +  V  +AM+ +GG     E  I R +R
Sbjct: 299 AAWNADNNDGNFDPAA-----AAMCKYYCANASFEVTDDAMQIMGGIAVASEHRINRIWR 353

Query: 436 ESPANSILLGSGNAMVL 452
           +   + +  G+   M+L
Sbjct: 354 DLRVDRVSGGTDEMMIL 370


>gi|297264825|ref|XP_001109931.2| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Macaca mulatta]
          Length = 396

 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 43/265 (16%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246
           P       IG + +TE   G+D+  I +  +K  DG  + L+G K F+S+  +SD  I++
Sbjct: 159 PQMTAGKCIGAIAMTELGAGSDLQGIKTNAKK--DGSDWILNGSKVFISNGWLSDVVIVV 216

Query: 247 AQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A               E  SP  G+    ++N +                GF+ G     
Sbjct: 217 AVTN-----------HEAPSPARGISLFLVENGMK---------------GFIKGRKLHK 250

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G     ++LI    A M+VS       E  +Y ++R   G  +     ++  +A++   
Sbjct: 251 MGLKAQERLLI----ADMAVSASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTH 306

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I    A    + N     +++  ++A     A + KYW  ++  +V  + ++  GG GY+
Sbjct: 307 ICVTRAF---VDNCLQLHEAKRLDSA----TACMAKYWASELQNSVAYDCVQLHGGWGYM 359

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  IA+ Y ++    I  G+   M
Sbjct: 360 WEYPIAKAYVDARVQPIYGGTNEIM 384


>gi|302503412|ref|XP_003013666.1| hypothetical protein ARB_00113 [Arthroderma benhamiae CBS 112371]
 gi|302655028|ref|XP_003019309.1| hypothetical protein TRV_06653 [Trichophyton verrucosum HKI 0517]
 gi|291177231|gb|EFE33026.1| hypothetical protein ARB_00113 [Arthroderma benhamiae CBS 112371]
 gi|291183024|gb|EFE38664.1| hypothetical protein TRV_06653 [Trichophyton verrucosum HKI 0517]
          Length = 417

 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +K+    Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 140 LGVTEPDAGSDVSGIKTVAKKVGSH-YIVNGAKKWITNGIWADYCTAAVRTGGPGHGGIS 198

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +R+ N  G  ++ +  LEF +               F +++ + N  
Sbjct: 199 FLIIPLTAEGVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGKENEGFKYIMSNFNPE 257

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + L SA + +S  RV + +A  Y+  R   G  L+   V++  I+ +   
Sbjct: 258 R---------LSLASACIRLS--RVCVEDAFRYSTVRETFGKPLLANQVIRAKISKMGQL 306

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +   ++    +     + A + K    +    V  EA + +GG+GY
Sbjct: 307 IEPCQAFMDQLAYTIKTSEQTGRKIDIGGMTA-LLKVMSTRCLEKVCREAQQIMGGAGY 364


>gi|167045700|gb|ABZ10347.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine bacterium HF4000_APKG2098]
          Length = 266

 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K + E      +M P+       M   + ++AM+  GG GY +++ I + YR++    
Sbjct: 53  DNKXKXEALDLVSLMTPVVXSLFTDMGMEITSDAMQIFGGYGYTKDQGIEQLYRDNRITP 112

Query: 442 ILLGSGNAMVLDVL--NLLEKGTNL 464
           I  G+ +   +D++   L  K  N+
Sbjct: 113 IYEGTNSIQSIDLVFRKLFNKDRNI 137


>gi|154318532|ref|XP_001558584.1| acyl-CoA dehydrogenase family protein [Botryotinia fuckeliana
           B05.10]
 gi|150857785|gb|EDN32977.1| acyl-CoA dehydrogenase family protein [Botryotinia fuckeliana
           B05.10]
          Length = 437

 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 112/255 (43%), Gaps = 27/255 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
            G+TE   G D   + ++ ++  D  Y +SG K W  S+ ++   ++LA+          
Sbjct: 163 FGVTEPNTGLDTLKLRTRARREGD-TYKISGQKIWISSAQVATKMVLLARTTPLEEVKKP 221

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            EG +  F +     D    GL  +++K K+G R+    E+ F N   +++   ++    
Sbjct: 222 SEG-LSLFFIDF---DPKQPGLELKKIK-KMGGRAIDANEVFFDN---YIVNSDSLIGKE 273

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362
            +  KI+++ +++    ++G  + L  A  Y   ++    I+  +P+     ++  +AD 
Sbjct: 274 GQGFKIVLHGMNAERCLLAGEALGLGYAALYRASQYAKERIVFGRPIGMNQGIQHPLADA 333

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGG 421
            + + AA   ++  A  +D + +       A  +     KY   + A      ++  +GG
Sbjct: 334 YMHLEAAKLATYHAARLYDSSTTDETITQTAVGVACNSAKYLAAEAAFTACERSVLSLGG 393

Query: 422 SGYIEERSIARHYRE 436
            GY +E  + R+ RE
Sbjct: 394 MGYAQEYHVERYLRE 408


>gi|298113042|gb|ADI58631.1| AsuB2 [Streptomyces nodosus subsp. asukaensis]
          Length = 394

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 122/305 (40%), Gaps = 49/305 (16%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P     V +   LTE + G+  A + S   +  D  Y L+G K  ++  +  D +++ A+
Sbjct: 121 PSVAGRVRVAFTLTEPQAGSG-ADLRSTVVREGD-TYYLTGAKHLITFGVRCDYWLLAAR 178

Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296
           V G  G       +VPR        G+  +     +G        L F  T        G
Sbjct: 179 VAGSTGHEGTVALMVPR-----DAPGVTVEDTSQTMGVVGTDHARLTFDRTPVPVAHRLG 233

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
                L V+ G         +L  + +SV+   V LA      A+ YAR R   G  L  
Sbjct: 234 AEGDGLAVALGG--------FLTPSRISVAMSCVGLASRAQELALEYARGRVTFGKPLTS 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +  ++  +A+   DI A+  L    A  + EA  R  +AA    MA +T      M   V
Sbjct: 286 RQALQFMLAENEADIEASRQLVLHAARRW-EAGGR--DAAKLSSMAKLT---AVDMLTRV 339

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             +A++  GGSGY +   I R YR++ A     G+         N ++K   +F +L ++
Sbjct: 340 TDKALQVHGGSGYWKSSPIERVYRDARAQRFEEGT---------NEIQKAV-VFRELVNS 389

Query: 472 LEQDL 476
            E  L
Sbjct: 390 AEAGL 394


>gi|260905206|ref|ZP_05913528.1| glutaryl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 109/275 (39%), Gaps = 41/275 (14%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235
           F  E       P      AIG  GLTE   G+D + + +  +K  DG  + L+G K W  
Sbjct: 113 FGSEAQKEEWLPKMAAGKAIGCFGLTEPDVGSDPSGMKTTAKK--DGSDWILNGAKMWIT 170

Query: 236 SSPMSDAFIMLAQVE-----GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           +SP+SD  ++ A+ E     G+  V  F+VP   E     G+    +  KI  R++ T E
Sbjct: 171 NSPVSDVMVVWAKTEETDAKGKPVVRGFVVPSDTE-----GVQTPEIHRKISLRASITGE 225

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHV 344
           +   N       +L       GP+  +    Y    +  V+G  R +L  A+ Y   R  
Sbjct: 226 IVLDNVRLPEDAMLPKAKGLKGPLSCLSEARY--GIVFGVTGAARDALRSALEYTNTR-- 281

Query: 345 SGGILIDQPVMKRAIADIALDIAAA-----TALSFRLANSFDEAKS-RSEEAAYARIMAP 398
              I  D+P+    I+   L  A       T L+  L    D  K  R E+ +  +++  
Sbjct: 282 ---IQFDRPLSSFQISQQKLAKAFGQYSQITLLAAHLGKLKDSEKGVRPEQISLGKMVNV 338

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            T    C+   A+        GGSG   E    RH
Sbjct: 339 DTAMNVCRDLRAL-------FGGSGITSEYPPLRH 366


>gi|255600684|ref|XP_002537510.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223516083|gb|EEF24874.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 218

 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A + KYW   +   ++   ++  GG G++ E  IAR Y++S    I  G+   M L
Sbjct: 157 ASMAKYWVTDLENKIVDRCLQLFGGYGFMNEYPIARMYKDSRVQRIYGGTNEIMKL 212


>gi|271970235|ref|YP_003344431.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270513410|gb|ACZ91688.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM
           43021]
          Length = 385

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D A + +  ++ + G + L+G K W  +  ++D  ++ A
Sbjct: 118 PRMAAGEAIGCFGLTEPDHGSDPANMRTHAKQDASGDWILNGAKMWITNGSIADVAVVWA 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           Q E  +  F+VP         G     +  K+  R++ T  L F + 
Sbjct: 178 QTEDGIRGFVVPT-----DTPGFSAPEIHKKMSLRASVTSSLYFDDV 219


>gi|91218302|ref|ZP_01255248.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
 gi|91183577|gb|EAS69974.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
          Length = 380

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 40/263 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           L+E   G+D  +  +    + D  Y ++G K W  +   +  ++++A  +       +  
Sbjct: 125 LSEPEAGSDATSQKTTAIDMGDH-YVINGTKNWITNGNSASVYLVIAHTDKDKKHRGINA 183

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303
           F++ + +E     G      + K+G R + T  L F++             FGF      
Sbjct: 184 FIMEKNME-----GFVVGPKERKMGIRGSDTHSLTFNDVKVPKENRIGEDGFGFKFAMKT 238

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ G        I + +  + ++     LA++  Y++ R   G  +++   +   +AD+ 
Sbjct: 239 LAGGR-------IGIAAQALGIAAGAYELAKS--YSKIRKAFGTEIMNHQAIAFKLADMH 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  +  + A   D   +     A A++       +  ++A  V  EA++  GG+G
Sbjct: 290 TSIEAARHMVMKAAWDKDNGLNYDLSGAMAKL-------YASQVAMDVTIEAVQVHGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGS 446
           Y+ E  + R  R++    I  G+
Sbjct: 343 YVREYHVERMMRDAKITQIYEGT 365


>gi|90417874|ref|ZP_01225786.1| isovaleryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337546|gb|EAS51197.1| isovaleryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 382

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 20/255 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L ++E   G+D+  +  +  K  +  + L+G K W  + P +   I+ A+ +   G   +
Sbjct: 123 LAMSESGAGSDVVGMKLRADK-RNHRFVLNGTKMWITNGPDASTLIVYAKTDPDAGPRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311
              L +    G    +  +K+G R + T EL F        N  G   G   V    ++ 
Sbjct: 182 TAFLIEKDMAGFSTAQKLDKLGMRGSNTCELVFQDCEVPYENILGEEGGGAKVLMSGLDY 241

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            +++  L +  + +  M   L   + Y   R   G  + +  +M+  +AD+ + + A  A
Sbjct: 242 ERVV--LSAGPLGI--MAACLDVVVPYVHEREQFGQPIGEFQLMQGKLADMYVTMNACRA 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A + D  ++  ++AA   +       +  + A  +  EA++ +GG+GYI +    
Sbjct: 298 YVYAVAAACDRGETSRKDAAGCIL-------YAAEKATQMALEAIQALGGNGYINDYPTG 350

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 351 RLLRDAKLYEIGAGT 365


>gi|288922056|ref|ZP_06416262.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288346588|gb|EFC80911.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 420

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 28/274 (10%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
           P+ +      + LTE     G+D + + +    + DG + + G K F++     AF I +
Sbjct: 138 PLLRGETRSSIALTEPAPGAGSDPSMVRTSAVPV-DGGWVIDGAKHFITGAEGAAFTICI 196

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A+ EG    FLV    +  +P     +R+     + +    E+ F++ F     +LGD+ 
Sbjct: 197 ARTEGGTTMFLV----DQDNPGLRVGRRMPTLDHSAAGGHCEVTFADCFVPDDAVLGDVG 252

Query: 304 -------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  V   P      + +L  A  +       +     + +R       + D  + +
Sbjct: 253 AGLRYAQVRLAPSRLAFCMAWLGLAARAHEMAAAWITGRSSFGQR-------ISDHGMAQ 305

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD  +DIAAA AL   +A   DE    S   + AR  A I K +  +    V+   +
Sbjct: 306 AHVADNEIDIAAARALVRSVARVLDEEGLAS---SAARHGAAIAKTFVAEAVWRVLDRVV 362

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  GG G  E+  +AR   E+    I  GS   +
Sbjct: 363 QLYGGLGICEDHLVARFLVEARGFRIYEGSSEVL 396


>gi|148548909|ref|YP_001269011.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512967|gb|ABQ79827.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 388

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 23/285 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +   A+   LTE   G+D  AI +  ++  +  Y L+G K ++S +P +D  ++LA 
Sbjct: 120 PVCRAEKAVCFALTESEAGSDATAIKTSARREGEH-YVLNGAKRYISGAPYADIAVLLAV 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELE-----FSNTFGFLLGDL 302
            +   G   +     D S +G+  +   + + G  ++  + LE      +N  G      
Sbjct: 179 TDPGRGAQGISAFFVDLSASGVRVESDYSVMSGGGAHGDIILEDVRVPAANRIGEQGQGF 238

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            ++ G +  +  L++  + +       ++L  +I YAR R   G  +     +   IAD+
Sbjct: 239 KLAMGRI-TLNRLLHCPTLLGLAG---LALNLSIDYARTRKQFGQPIAMFQSINHMIADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA ++ +  A   D   +        R  AP+ K +  + A  +   A++  GG+
Sbjct: 295 ATELHAARSMVYATAAVNDAGGN-------IRTQAPMCKLFVSETAFRIADRAVQIHGGA 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           G +    +   +R +    IL G+         N + KG  + EQ
Sbjct: 348 GLLRGNPVEWIFRATRMMRILTGTSEIQ----RNTIAKGVLMPEQ 388


>gi|154270945|ref|XP_001536326.1| hypothetical protein HCAG_08647 [Ajellomyces capsulatus NAm1]
 gi|150409549|gb|EDN04993.1| hypothetical protein HCAG_08647 [Ajellomyces capsulatus NAm1]
          Length = 434

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSE 388
           V+L +A  YA+ R V G  +     +   +AD  +++ AA   ++   N +D AK+ +S 
Sbjct: 298 VALEKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNLEAAKLATYHATNLYDAAKTDKSI 357

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 +     KY   + A      A+   GG GY +E ++ R+ RE
Sbjct: 358 TQKAVGVACNSAKYLAAEAAFTACERAVLAHGGMGYAQEYNVERYLRE 405


>gi|118466268|ref|YP_883171.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167555|gb|ABK68452.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 463

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ++G+   F+V     + S  GL   +    +G R+ 
Sbjct: 249 YRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESSTKGLTV-KADPSMGIRAA 302

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
               +E S      G  LG+   +     +   L  L  A ++V      L   + Y + 
Sbjct: 303 ELGHVELSGVTVPLGARLGEDEATDDDYSEAIALSRLGWAALTVGTSHAVLDYVVPYVKE 362

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A   ++    + EAA A+ +     
Sbjct: 363 REAFGEPIARRQAVAFMCANIAIELDGLRLITWRGAARAEQGLPFAREAALAKRLG---- 418

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    + ++ ++ +GG GY  E  + R YR+
Sbjct: 419 ---ADKGMQIGSDGVQLLGGHGYTNEHPVERWYRD 450


>gi|13474356|ref|NP_105924.1| dibenzothiophene desulfurization enzyme [Mesorhizobium loti
           MAFF303099]
 gi|14025109|dbj|BAB51710.1| dibenzothiophene desulfurization enzyme [Mesorhizobium loti
           MAFF303099]
          Length = 415

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSGGI--LIDQPVMKRAIADIALDIAA 368
           I + +D+ I      + ++ E +H+ R R    +  G+    D P   +A+ D+ L + A
Sbjct: 258 IQVAVDTGIA-----QAAIDETVHFVRTRSRAWIDSGVDNAWDDPYTIQAVGDLTLRLHA 312

Query: 369 ATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A AL  +   + D+  A+  +E  A+A+I+    K    ++A A   +  E  G    + 
Sbjct: 313 AQALLEKAGLAIDKAVAEPTAETVAHAQIVTAEAKILSTEIAIAATNKLFELAGTRSTLA 372

Query: 427 ERSIARHYRESPANSI 442
           E ++ RH+R +  +++
Sbjct: 373 EHNLDRHWRNARTHTL 388


>gi|307595603|ref|YP_003901920.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307550804|gb|ADN50869.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 421

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 47/325 (14%)

Query: 141 YLMAQLEAGHLM--SPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +LMA + A  L    PS+       L T  P + + +A      E  P     + K    
Sbjct: 82  FLMAAIAAEELAYADPSLAVPVYFLLETAWPFIVQRYAKDSVKEEVLPR----LTKGEAW 137

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-------PMSDAFIMLAQVE 250
           IG+  TE +GG+D+A   ++  K+ +G + L+G K  ++        P    F+ +    
Sbjct: 138 IGIASTEPQGGSDVAGERTEA-KLVNGKWVLTGEKNMVTGVSIALRLPYGGGFVTIT--- 193

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            R G    P   +  +   + +   +N + N    T + E     G   G L ++  PV+
Sbjct: 194 -RTG----PLEAKHRAITTMLFMVKRNGVVNTGFETRDYEEWGRRGIPTGYLRLNGAPVD 248

Query: 311 DMKILIYLDSAI-MSVSGMRVSL----AEAIHYAR------RRHVSGGILIDQPV----- 354
              +L  +++   +++ G  V+     A A+  AR      R  +   ++  +P+     
Sbjct: 249 PEFVLGEVNNGFKIAMEGFDVARTLIGAAALGTARWMLEQGREWIKNRVVFGKPISSYQS 308

Query: 355 MKRAIADIALDIAAATALSFR---LANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAP 409
           +    A+++  + AA  + +R   LA+ F    S     + A A  MA   K    ++A 
Sbjct: 309 ISFRYAELSTRLEAARLMVYRAAWLADKFYRGDSSVSILDVANAGAMA---KMLAVELAI 365

Query: 410 AVIAEAMECIGGSGYIEERSIARHY 434
            V  E M+  GG  Y +E  IAR +
Sbjct: 366 DVGLEVMKWFGGVSYFKETPIARAF 390


>gi|312961398|ref|ZP_07775901.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311284293|gb|EFQ62871.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 387

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 49/237 (20%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K W      SD  I+LA+           EG +  FLV   L +   NG+  Q 
Sbjct: 147 YVINGQKVWISRIQHSDLMILLARTTPLAEVKKKSEG-MSIFLVD--LREAIGNGMTVQP 203

Query: 275 LKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N + + +N   EL F N               F ++L  LN         + LI    
Sbjct: 204 IANMVNHETN---ELFFDNLEIPADSLIGEEGKGFRYILDGLNAE-------RTLI---- 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 250 AAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D   +       A   A + KY   K +       ++  GG G+  E  + R +RE+
Sbjct: 310 DSGIN-------AGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRET 359


>gi|289643177|ref|ZP_06475305.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289507008|gb|EFD27979.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 402

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 17/274 (6%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ 248
           M +  +A    L+E++ G+D+AA+  +     DG  Y L GHK W   +  +D F ++A+
Sbjct: 113 MARGELAGAFALSEEQAGSDVAALALRAVPDGDGTGYVLDGHKTWIAGAAGADVFCVVAR 172

Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-FLLGDLNVST 306
             +G     L   L+  G+P GL  + + + +  R  A +E +        +LG  +   
Sbjct: 173 TGDGPAALGLTALLVPAGTP-GLRIEPI-DMLAERDIARLEFDGCRVAADAVLG--SRGG 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G V  M++L    L     ++   R +   A+  AR R   GG L D P +K ++AD+ +
Sbjct: 229 GFVVAMELLERFRLTVGAAALGFARRAADAALARARGRAAYGGRLFDLPTVKASLADVEV 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L  R A   D     +  A+       I K +  + A  V+  A++  G +G 
Sbjct: 289 RLNAAALLVARAAWEADRGTPPARHAS-------IAKLYATEAAQQVVDAAVQVFGAAGL 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +    R YR+  +  I  G+     L + + L
Sbjct: 342 VRDSLPERLYRQIRSLRIYEGASEVQRLAIADAL 375


>gi|330945152|gb|EGH46865.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 130

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 348 ILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +  D+P+++       +AD+   I AA  L+   A      ++   EA+ A++ A     
Sbjct: 17  VQFDKPIIEHQSIANLLADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAE 76

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           W C       ++A++  GG GY+E+  + R+YR++    I  GS  
Sbjct: 77  WVC-------SKAIQIHGGYGYLEDYPVERYYRDARITQIYEGSSE 115


>gi|313217249|emb|CBY38391.1| unnamed protein product [Oikopleura dioica]
          Length = 395

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 24/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251
           L ++E   G+D+ ++  Q  K      Y ++G K W  + P+ D  ++ A+ +       
Sbjct: 128 LAMSEPGSGSDVMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSK 187

Query: 252 RVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPV 309
            +  F +  R LE     G     +  K+G R + T EL F N        L V   G  
Sbjct: 188 SITAFAIDVRELE-----GFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGVEGKGAA 242

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MK L    L  A  +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++
Sbjct: 243 VLMKGLNVERLTGAAGAVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLS 302

Query: 368 AATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  A  + L  + D + K+ +     A +M      +  + A  V  EA++ +GG+GY  
Sbjct: 303 ATRAYLYALLKAADKDQKTLTNHDCAAVLM------YGAEQATKVSLEAIQILGGNGYTN 356

Query: 427 ERSIARHYRESPANSILLGS 446
                R  R+     I  G+
Sbjct: 357 AYPAERIMRDCKIGEIGAGT 376


>gi|319442749|ref|ZP_07991905.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 395

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 29/253 (11%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
           G GLTE   G+D A  T    K+ DG + ++G K F+++  +D  + +    V G     
Sbjct: 133 GFGLTEPGAGSD-AGGTKTTAKLEDGNWRINGSKQFITNSGTDITSLVTTTAVTGTREDG 191

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
              +   +VP        +G   +   +K+G   + T  L + +       LLG      
Sbjct: 192 RKEISAIIVPT-----DTSGFTAEPAYDKVGWNCSDTHPLSYDDVVVPEENLLG--KRGR 244

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G  + + IL    +  A ++    +  + EA+ YA++R   G     +P+ +     ++ 
Sbjct: 245 GFAQFLSILAEGRVAIAALATGAAQGCVDEAVEYAKQRTSFG-----RPIAE--YQGVSF 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IA   A ++    ++  A  +          A I K      A     +A +  GG+G+
Sbjct: 298 KIARMEARAWTARQAWRAAALKMLAGEDFSREASIAKMVASDAAMDNARDATQVFGGAGF 357

Query: 425 IEERSIARHYRES 437
           + E  +ARHYR+S
Sbjct: 358 MNETRVARHYRDS 370


>gi|330935041|ref|XP_003304811.1| hypothetical protein PTT_17487 [Pyrenophora teres f. teres 0-1]
 gi|311318467|gb|EFQ87130.1| hypothetical protein PTT_17487 [Pyrenophora teres f. teres 0-1]
          Length = 511

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 50/272 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +      DG  Y + G  KW  +   SD F+   + +      L
Sbjct: 244 LAITEAFAGSDVAGIRTTATLSPDGKHYIVRGTKKWITNGMFSDYFVTGCKTDKGFSVLL 303

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
           + R            + ++ K+       ++  +S T G    + N    PV     E+ 
Sbjct: 304 IER-----------DEAVETKL-------IKTSYSTTAGTAFVEFNNVKVPVHHLLGEEH 345

Query: 313 KILIYLDSA------IMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           K  + + S       +MS + +R S   + E + +  +R V G  LI+QP +++ +A + 
Sbjct: 346 KGFVVIMSNFNHERFMMSCAVIRQSRTVVEECLKWCNQRIVFGKKLIEQPAIRQKLAKMI 405

Query: 364 LDIAAATA----LSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAME 417
             + A  A    ++F++ +     +S+        +  PI   K +  + A  +  EA+ 
Sbjct: 406 SHVEANQAWLESIAFQMTHMSYGQQSK-------LLGGPIGLLKSFATRSAHEIADEAVN 458

Query: 418 CIGGSGYIE---ERSIARHYRESPANSILLGS 446
             GG G  +    R I + +R    ++IL G+
Sbjct: 459 IFGGRGLTQGGMGRVIEQFHRTYKFDAILGGT 490


>gi|271962603|ref|YP_003336799.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270505778|gb|ACZ84056.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 624

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 29/253 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A + +   +  D  Y L G K W  +  ++D  +++A+   ++  F+V  
Sbjct: 166 LTEPDVGSDPARLATTAVRDGDD-YLLDGVKLWTTNGVVADLLVVMARTGTKISAFVV-- 222

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
             E  +P G+  +R    +G R    +E   +      +   N+     + +KI L  L+
Sbjct: 223 --EADTP-GITVERRNAFMGLRG---IENGVTRFHRVRVPAANLIGREGQGLKIALTTLN 276

Query: 320 SAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADI---ALDIAAATA 371
           +  +S+  +    A+ A+  AR     R   G  + +   + R IA I   A  + A   
Sbjct: 277 TGRLSLPAVCAGNAKWAVKIAREWGDARVQWGRRIGEHEAVARKIAFIAGTAYALEAVMD 336

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI- 430
           LS RLA+         EE+   RI A + K +  +MA  V  E ++  GG GY    S+ 
Sbjct: 337 LSCRLAD---------EESNDIRIEAALAKLYASEMAWQVADELVQIRGGRGYETAESLA 387

Query: 431 ARHYRESPANSIL 443
           AR  R  PA  +L
Sbjct: 388 ARGERGVPAEQVL 400


>gi|255938478|ref|XP_002560009.1| Pc14g00140 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584630|emb|CAP74155.1| Pc14g00140 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 453

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 35/263 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
            GLTE   G+D   +++  +    G       KW   +     F++ A+  G+ G     
Sbjct: 159 FGLTEPDHGSDATFMSTTARPTRGGFEIKGAKKWQTGAHHCTHFLIFARTSGKAGSAQGI 218

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----SNTFGFLLGDLNVSTGP 308
             FLVPR  +      + Y+   N   +  +ATVEL       S   G +   L ++   
Sbjct: 219 TAFLVPR--DTRGVRIVSYEWTLNMPTD--HATVELNSVWVPESAVLGSIDQGLAIAQTF 274

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVMKRAIADIALDI 366
           V + +I      A  S    R  L  +I  AR R +   G  L D   ++  + ++   +
Sbjct: 275 VHENRI----RQAASSCGAARYCLDRSIDRARARKIWGEGKSLADNQAIQFPVVELMTQV 330

Query: 367 AAATALSFRLANSFDE-----AKSRSEEAAYARIMAPIT------KYWCCKMAPAVIAEA 415
                   + +   D        S+++ A +  I   ++       +W  ++       A
Sbjct: 331 EMLRLFILKTSWEMDRIVAECQSSKAQRAPWVEIEGRLSDQVAMCNFWANRLCCQAADRA 390

Query: 416 MECIGGSGYIEE---RSIARHYR 435
           ++  GG GY        I RH+R
Sbjct: 391 IQIHGGDGYSRHYPFEHIYRHFR 413


>gi|88857933|ref|ZP_01132575.1| acyl-coa dehydrogenase RedW [Pseudoalteromonas tunicata D2]
 gi|88819550|gb|EAR29363.1| acyl-coa dehydrogenase RedW [Pseudoalteromonas tunicata D2]
          Length = 388

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF--LV 258
           +TE++ G+DI  +T++  K   G + L+G+K +++ +P  D FI++       G +    
Sbjct: 127 ITEQQAGSDIYGMTTRADKYDHG-FILTGNKHYITNAPFCD-FIVVHVRTADAGNYFDFS 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV-----E 310
             +L+  +P     Q   +K G R+ A  ++ FS    +   L+G L     P+     E
Sbjct: 185 TFILDRQTPCVSVTQTPHSKSGLRTTAMGDITFSTCQLSDDALIGRLGAG-APIFQVSME 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++ ++     + +  M+  L + + +  +R   G  L +   ++  ++D+  +  +A 
Sbjct: 244 WERVCLF----ALYLGQMKRQLKKTVQFLSQRQQFGSKLAEFQAVQHQVSDMYSNYESAR 299

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG--GSGYIEER 428
            L ++ A   D   +    +A A++           ++ A I+ A   +   G+  +   
Sbjct: 300 LLLYKAAWGLDRGDTSGVSSALAKL----------AVSQAAISNAQMAVQLHGAQGVLSG 349

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            I R  R++  ++I  G+ N +            NL   LF  L+ D
Sbjct: 350 DIERMLRDAMPSAIFSGTTNVL----------KNNLSTSLFKRLQAD 386


>gi|218680375|ref|ZP_03528272.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli CIAT 894]
          Length = 306

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 52/276 (18%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG-------PGGERWDKVEFHPAWHALLRRSIHD 113
           LG+ ++     E  R A      L   G        GGE    V     W  L R  I  
Sbjct: 31  LGDDLVDAILSEAGRFATEEVAPLADIGDRQGARLEGGE----VRLPDGWRDLYRNWISG 86

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVH 171
           G +      +F    +   H +  A L +         ++P++T  ++  V+   +  + 
Sbjct: 87  GWNGLTAPEAFGG--QALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALK 144

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +  ++ S E+  T             + LTE   G+D+  + ++ ++ +DG Y L G 
Sbjct: 145 EKYLARMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRLFGQ 191

Query: 232 KWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRL 275
           K F++    DA      ++LA++         +  FLVP+ L  +DGS    N L    L
Sbjct: 192 KIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSL 251

Query: 276 KNKIGNRSNATVELEFSN--------TFGFLLGDLN 303
           ++K+G   + T  + + +          G+L+G+ N
Sbjct: 252 EHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEEN 287


>gi|182439543|ref|YP_001827262.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468059|dbj|BAG22579.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 414

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 28/267 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   +   IG  GLTE   G+D A + +  ++  +  + L+G K W  +
Sbjct: 132 FGSEEQKLRWLPAMASGEIIGCFGLTEPDHGSDPAGMRTYAKRDGED-WILTGRKMWITN 190

Query: 237 SPMSDAFIMLAQVE----GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-- 289
             ++   ++ AQ +    GR +  F+VP         G     + +K   R++ T EL  
Sbjct: 191 GSVAGVAVVWAQTDEGADGRGIRGFVVPT-----DTPGFSAPEIHHKWSLRASVTSELVM 245

Query: 290 -EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSG 346
            E       +L D +   GP   +  L +    I+  S+   R S   A+ YAR R   G
Sbjct: 246 DEVRLPADAVLPDASGLRGP---LSCLSHARYGIVWGSMGAARASFESALDYARGREQFG 302

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    + +  +AD+A+++     L+  L    D    R E+ ++ ++         C+
Sbjct: 303 RPIGGFQLTQAKLADMAVELHKGILLAHHLGRRMDAGGLRPEQVSFGKLNNVREAIEICR 362

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433
            +  +       +G +G   E  + RH
Sbjct: 363 TSRTI-------LGANGISLEYPVMRH 382


>gi|89101367|ref|ZP_01174154.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89083919|gb|EAR63133.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 131

 Score = 40.0 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  +  Q  +   +AD+A ++ A+  L ++ A      +    +A+ A++ A
Sbjct: 18  YSKERSQFGKPISHQQGIGFKLADMATNVEASRLLVYQAAMMRQNGERCGMQASMAKLFA 77

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   K A     EA++  GG GY E+  + R++R+S    I  G+
Sbjct: 78  S-------KTAVETSIEAVQVFGGYGYTEDYPVERYFRDSKITEIYEGT 119


>gi|327294361|ref|XP_003231876.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326465821|gb|EGD91274.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 432

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +K+    Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 155 LGVTEPDAGSDVSGIKTVAKKVGSH-YIVNGAKKWITNGIWADYCTAAVRTGGPGHGGIS 213

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +R+ N  G  ++ +  LEF +               F +++ + N  
Sbjct: 214 FLIIPLAAEGVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGKENEGFKYIMSNFNPE 272

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + L SA + +S  RV + +A  Y+  R   G  L+   V++  I+ +   
Sbjct: 273 R---------LSLASACIRLS--RVCVEDAFKYSTIRETFGKPLLANQVIRAKISKMGQL 321

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +   ++    +     + A + K    +    V  EA + +GG+GY
Sbjct: 322 IEPCQAFMDQLAYTIKTSEQTGRKTDIGGMTA-LLKVMSTRCLEKVCREAQQIMGGAGY 379


>gi|254489431|ref|ZP_05102634.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214041938|gb|EEB82578.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 382

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 16/255 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257
           L ++E   G+D+AAI +    + DG Y L G K +++ +P++D  ++LA+   G +   L
Sbjct: 124 LAVSEPEAGSDLAAILTTAVAV-DGGYRLEGRKCYVTNAPVADVLVVLAETRPGNLAFGL 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
               LE G+P GL      +K+G R+ +  ++E           +      +     ++ 
Sbjct: 183 SAFCLERGTP-GLTTPAPVSKMGLRTASMGDVELDGCLVPKSARIGAEGAGLSLFLKVME 241

Query: 318 LDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAIADIALDIAAATALS 373
           ++ A +   ++  M        HYA+ R        DQP+ +  ++     ++   T+L+
Sbjct: 242 MERAFILAPAIGSMERVFEATRHYAQNRKQ-----FDQPIAEFESVYGRLAEMYRRTSLA 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL     +A +R        + A + K        A   +A+      GY+    I R 
Sbjct: 297 -RLV--LRDAAARKGSGGSITLEASMAKLTISDAWVANCQDALAIFAAKGYLSATGIERE 353

Query: 434 YRESPANSILLGSGN 448
            R++    I  G+ +
Sbjct: 354 LRDALGGQIYSGTSD 368


>gi|15558970|gb|AAL02066.1|AF320253_4 putative acyl-CoA dehydrogenase [Azoarcus evansii]
          Length = 404

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 128/320 (40%), Gaps = 60/320 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +P + +   PK+ S E+                  LTE   G+D+AA+ +  +  
Sbjct: 102 ITLAGSPELQRRVLPKVASGEW-------------IAAFALTEPEAGSDVAAMATSARLD 148

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--------------FLVPRLLEDGS 266
            D  Y L G K W  +  ++D + + A+     G               F +   L+  +
Sbjct: 149 GDH-YVLDGEKTWISNGGIADVYCVFARTGDAPGTRGLSAFVVHPDMPGFEIAERLDVIA 207

Query: 267 PNGLCYQR---LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAI 322
           P+ L   R   L+  + NR  A+ E       GF +            M+ L I+  S  
Sbjct: 208 PHPLARLRFNGLRVPVENRLGASGE-------GFKIA-----------MRTLDIFRASVA 249

Query: 323 MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +  G  R +L EA+ +AR R + G  L D  + +  + ++A D+ AA  L+ R A   D
Sbjct: 250 AAALGFARRALDEALAHARGRAMFGHTLADFQLTQAKLGEMATDVDAAALLTARAAWQRD 309

Query: 382 EAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            AK   + EAA A++ A        + A  VI  A++  GG G      +   YRE  A 
Sbjct: 310 VAKKPTTREAAMAKMTA-------TENAQRVIDAAVQMHGGQGVRVGVKVESLYREIRAL 362

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L V   L K
Sbjct: 363 RIYEGATEVQKLIVARELMK 382


>gi|301057268|ref|ZP_07198394.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300448633|gb|EFK12272.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 551

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 25/275 (9%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-M 239
           EY P    P     +     LTE   G+D   I +  Q+  DG  Y L+G K ++++   
Sbjct: 129 EYLP----PAATGEMIFAFALTEPETGSDAKHIKTFAQRSRDGSHYILNGTKTYITNGGY 184

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           + A  + AQ++     F+   ++E GS  G+   +   K+G   ++TV + F +     +
Sbjct: 185 AGALTVFAQLDRSKPGFMGAFVVETGS-EGVEIGKDMPKMGLTLSSTVSIRFKDV---KV 240

Query: 300 GDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              N+   P +  KI +       L  A  S   M  S  E +  A RR   G  +    
Sbjct: 241 PVKNLIGKPGDGFKIAMAILNYGRLGLAAASNGLMAQSAKEMLERAHRRRQFGVSISQFE 300

Query: 354 VMKRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +++  I +  ++   + A++   A     D     + E+++A++ +  T+ W       V
Sbjct: 301 LVQEKILNAQVNAFLSKAITAFTAGMLEQDPLVRVAIESSHAKLFS-TTRAW------DV 353

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EA++  GGSGY++     +  R+    ++  G+
Sbjct: 354 LYEALQIHGGSGYLKTLPYEKRLRDFRVTTVFEGT 388


>gi|145223029|ref|YP_001133707.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443485|ref|YP_004076364.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215515|gb|ABP44919.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315261788|gb|ADT98529.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 395

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 17/114 (14%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEA 383
           RV+L +A+ Y   R     ++ ++P+     ++  +AD    + AA  +  +    +D  
Sbjct: 266 RVALEKAVKYGNER-----VVFNRPIGMNQGLQFPLADSLARLDAAELVLRKATWLYDNG 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           K    EA  A       KY C          A++  GG GY EE  ++R++RES
Sbjct: 321 KPCGREANTA-------KYLCADAGFGAADRALQLHGGMGYSEEYHVSRYFRES 367


>gi|295396993|ref|ZP_06807111.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
 gi|294974774|gb|EFG50483.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
          Length = 401

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 37/255 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256
             LTE   G+D+A       +     + ++G K W   + ++D   + A+ E  G+  CF
Sbjct: 143 FALTEPNHGSDVAWGLETSARREGDKWIINGEKRWIGGASVADVIPVFARDEETGKPKCF 202

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELEFSNTFGFLLGDLNVST-------G 307
           +V          GL    ++NKI  +   NA + L+          D+ V+         
Sbjct: 203 IV-----QAGQAGLDIDVIQNKIALKIVPNANIHLK----------DVEVAESDRLQNIN 247

Query: 308 PVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             +D+  ++Y      A M+   M  +L  ++ Y   R   G  + +  +++  +A +  
Sbjct: 248 SFKDIAKVLYSTRAGVANMATGAMAGALQASLKYVTERKQFGKEISNYQLVQEKLAMMQG 307

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA AL  ++A        + EE  Y  ++  + K          +A      GG+G 
Sbjct: 308 NLTAAMALCSQIAR-------QQEEGDYNEVVTSVGKMMNALRLRETVAMGRGICGGNGI 360

Query: 425 IEERSIARHYRESPA 439
           + +  IAR + ++ A
Sbjct: 361 VVDNDIARFFADAEA 375


>gi|239501892|ref|ZP_04661202.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 401

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  +  Y L+G K F++S   +++ ++ A ++ ++G    
Sbjct: 132 MAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERANSVVVWATLDRKLGRAAI 190

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             F+VP+    G+P G+  +RL++K+G +++ T  + F++
Sbjct: 191 KSFVVPK----GTP-GMKVERLEHKLGIKASDTAVISFTD 225


>gi|330835653|ref|YP_004410381.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567792|gb|AEB95897.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 386

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 40/280 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-----SDAFIMLAQ--V 249
           +G+  TE  GG+D+A I +  +K  +G  + L G K ++S  +         + LA+  +
Sbjct: 121 LGIASTEPSGGSDVAGIRTTAKK--EGTKFVLGGQKIYISGVLEALHWGGGHLTLAKTNL 178

Query: 250 EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           E +   +  F VP      S  G+   +++N +G    ++  + FSN       L+G+LN
Sbjct: 179 EAKHRGISMFYVPT-----SSPGVEVSKIEN-MGRAGISSGIITFSNAQIPEENLVGELN 232

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRA 358
                  D       + A + V+G  +  AEAI      Y ++R V    L D   +   
Sbjct: 233 KGFYYAMDG-----FNHARVLVAGACIGAAEAILEIGLEYIKQREVFSTKLKDFEAIAFE 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A++   +  A  L+++ A   D + +  E A    ++A ++K    ++A  +    M  
Sbjct: 288 AAELKTKLEMAKLLNYKAAWMMDRSPNSDETA----MLAAMSKLTAPQVAFEITKSVMMW 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G  GY ++  +   +R   A S L+G+  AM  +V+ L+
Sbjct: 344 MGAYGYSKDALVEMGFR--GAMSYLVGAEGAM--NVMKLI 379


>gi|290462827|gb|ADD24461.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus
           salmonis]
          Length = 418

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 26/259 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252
           L ++E   G+D+ ++ +    I DG  Y L+G K W  + P +D  I+ A+ + +     
Sbjct: 155 LAMSEPGSGSDVVSMRTTA--IEDGDDYVLNGSKFWITNGPDADILIVYAKTDPKNPKPQ 212

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +  F++ + +      G       +K+G   + T EL F N       +LGDLN    
Sbjct: 213 HGITAFIIEKDMP-----GFTTGPKLDKLGMCGSNTCELIFDNCRVPKENVLGDLNKGVY 267

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     L  L  A   V  M+ +   A  YA  R      +    +++  +AD+   + 
Sbjct: 268 VLMSGLDLERLVLAAGPVGIMQATCDVAWSYAHDRKQFSTPIGKFQLIQGKMADMYTTLN 327

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  +  + +  + +     S++ A   ++       C + +  +  +A++ +GG+GYI +
Sbjct: 328 SCRSYLYNVGKACNMGHVSSKDCAGVILL-------CAEKSTLMALDAIQILGGNGYIND 380

Query: 428 RSIARHYRESPANSILLGS 446
               R  R++    I  G+
Sbjct: 381 YPTGRFLRDAKLYEIGAGT 399


>gi|72161472|ref|YP_289129.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915204|gb|AAZ55106.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 396

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 10/193 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D  A+ ++ +++    + L+G K W  +  ++D  ++ A
Sbjct: 130 PRMAAGEAIGCFGLTEPDSGSDPGAMRTRARRVG-ADWVLTGTKMWITNGSVADVAVVWA 188

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             E  +  FLVP     G+P G     ++ K+  R++ T  L            L ++ G
Sbjct: 189 GTEEGIRGFLVP----AGTP-GFTATVIERKLSLRASITAALSLDEVRLPDSARLPLAAG 243

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I+  +    R     A+ YA  R   G  +    + +R +A++ +D
Sbjct: 244 LRAPLSCLTEARYGIVWGAAGAARACYEAALEYATSREQFGQPIAAFQLTQRKLAEMVVD 303

Query: 366 IAAATALSFRLAN 378
           +  A+  +  L  
Sbjct: 304 VNQASLTALHLGR 316


>gi|21225084|ref|NP_630863.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|20520763|emb|CAB39724.2| probable acyl-coA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 379

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 47/270 (17%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + + ++E   G+D+ A+  + ++ +DG + + G K ++S+      I+L           
Sbjct: 122 LSIAMSEPEAGSDVGALRCRARRAADGTWLIDGQKTWISNAHCARSILL----------- 170

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-------FLLG---DLNVSTG 307
           V R  ED    GL    L           VE+   +T G       FL G     +   G
Sbjct: 171 VARTGED-KHGGLTMFHLPA-----DTPGVEVRGIDTMGGREVNDVFLTGVRLPADAVVG 224

Query: 308 PVED-----MKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            V+D     M  L    ++L S ++ ++  R +  +A+ Y R R   G  +     ++  
Sbjct: 225 QVDDGWRQLMAGLNHERLFLASNMLGLA--RRAFDDALGYVREREQFGRPVGSFQALRHR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           +AD+A +I     L   +A   D    R    EA+ A++ A        ++A     E M
Sbjct: 283 VADLATEIECTRLLVRDVALDCDAQPDRLFPREASMAKLKA-------TEVAKRAALEGM 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +GG GY  E  + RH R +  +++  G+
Sbjct: 336 QMMGGYGYTTEFDMERHLRAAVVSTVYGGT 365


>gi|148261560|ref|YP_001235687.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146403241|gb|ABQ31768.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 427

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD  A+ +  ++  D  Y ++G K W   +  SD  ++LA+   R      
Sbjct: 162 FGVTEPTSGTDTTALRTTARREGDH-YVVNGQKIWTSRAEYSDLMLLLARTTPREQAQKR 220

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  FL+   + +    GL  + ++  +   ++AT E+ F N               F
Sbjct: 221 TDGLSVFLLD--MREARQAGLTIRPIRTMM---NHATTEVFFDNVRVPAENLIGEEGRGF 275

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI  +     +   +  + +A  YA+ R V G  +     +
Sbjct: 276 RYILSGMNAE-------RILIGAE----CIGDAKWFIDKATAYAKERVVFGRPIGQNQGV 324

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +  R A  F+  ++   EA  A+++A    +   ++       +
Sbjct: 325 QFPIAKAYARMRAAELMVHRAAALFEAGQNCGAEANMAKMLAAEASWEAAEI-------S 377

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+ EE  + R +RE+
Sbjct: 378 VQTHGGFGFAEEYDVERKFRET 399


>gi|302836564|ref|XP_002949842.1| hypothetical protein VOLCADRAFT_59964 [Volvox carteri f.
           nagariensis]
 gi|300264751|gb|EFJ48945.1| hypothetical protein VOLCADRAFT_59964 [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 32/294 (10%)

Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG---QKISD 223
           H +       R   P  KA   P   T   IG L ++E   G+D+ ++  +    Q    
Sbjct: 106 HSNLCVNQIVRNATPAQKAKYLPKLITGEHIGALAMSEPGSGSDVVSMQCRAEASQAAGG 165

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKN 277
             + L+G+K W  + P +D  ++ A+ +   G    PR     L+E G       Q+L +
Sbjct: 166 EAFVLNGNKMWCTNGPKADVLVVYAKTDPAAG----PRGITAFLIEKGMRGFRTAQKL-D 220

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332
           K+G R + T EL F N       +LG   V  G    M  L Y  L  A      M  +L
Sbjct: 221 KLGMRGSDTCELVFENCEVPAENVLG--GVGRGVAVMMSGLDYERLVLAAGPCGLMAAAL 278

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y+ +R   G  + +  +++  +AD+   + +A A  + +A   D   +  ++ A 
Sbjct: 279 DVALPYSTQRKQFGQPIGEFQLIQAKLADMYTRLQSARAYVYSVAAGADAGVADRKDCAS 338

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +       +  + A     +A++ +GG+GYI +    R  R++    I  G+
Sbjct: 339 VIL-------YAAEAATQSALDAIQILGGNGYINDYPTGRLLRDAKLYEIGAGT 385


>gi|319763100|ref|YP_004127037.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117661|gb|ADV00150.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 382

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 23/248 (9%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
           G  L+E  GG++I A+ ++ +K+  G + LSG K +++ +P++D  ++ A+    +    
Sbjct: 124 GFALSEPDGGSNIRAMKTRAEKVEGG-WKLSGSKLYITNAPIADFLMVAARTSPELKPDA 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +   + +    G    +L+ K G R + T  +   + F     L+G     T P+    +
Sbjct: 183 ISLFIVELPHKGFDIHKLR-KEGIRGSETALIHIEDAFVPDDCLVGG-RTGTYPL----L 236

Query: 315 LIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILI-DQPVMKRAIADIALDIAAA 369
           L  L    + V+    GM  +  +A        +  G  I D   +   +AD+A DI AA
Sbjct: 237 LECLSENRVGVAANALGMARAAFDAAKAFADDRIVAGKRIGDYQAVAHKLADMAADIEAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +  A   D+ +  +  AA  +++A  T       A  V  +A+   GG+G + E  
Sbjct: 297 RWMVYYGAWLVDQNRLDAATAAKVKLIATET-------ALRVSEQAIRIHGGAGIMREYP 349

Query: 430 IARHYRES 437
           + R +R++
Sbjct: 350 VGRIHRDA 357


>gi|218291046|ref|ZP_03495078.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239000|gb|EED06206.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 373

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  MR SL   I Y  +R   G  +     +   +AD+A++  AA  L ++ A++ D   
Sbjct: 235 VGVMRASLEYTIEYTSQRKAFGQEIPKFQGVSFTVADMAIETEAARNLVWQAAHAVD--- 291

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           SR  EA      A        +    V  + ++ +GG+GY++E  + +  R++ A ++L 
Sbjct: 292 SRGAEAMQDAARALAYALRSARF---VANQGVQMLGGAGYLQEYPVEKWMRDAQAQAVLY 348

Query: 445 G 445
           G
Sbjct: 349 G 349


>gi|297193727|ref|ZP_06911125.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151908|gb|EFH31417.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 576

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 61/309 (19%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++  A+++A   T    + W P              +   S+ +  G+TE   G++
Sbjct: 269 IVSPAIC-ATVIARFGTDEQKRQWLPG-------------LADGSLTMAFGITEPDAGSN 314

Query: 211 IAAITSQGQK--------ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGC----- 255
              IT+  ++         S G + L+G K F+S   ++DA +++ + E  R G      
Sbjct: 315 SHRITTTARRDGWGSPRTKSGGGWILTGRKVFVSGVDIADATLIVGRTEDARTGSLKPCL 374

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-NTFGFLLGDLNVSTGPV---ED 311
           F+VPR  E     G            RS   +EL+     F  +L D+ +    +   ED
Sbjct: 375 FIVPRDAE-----GF----------GRSVIDMELQAQEKQFELVLDDVRLPADALVGNED 419

Query: 312 MKILIYLD--------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             +L            +A  ++   R +LA+A+ YA+ R V    +     +   +A   
Sbjct: 420 AGLLQLFAGLNPERIMTAAFAIGMGRYALAQAVEYAKTRQVWKAPIGAHQAIAHPLAQAH 479

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +++  A  +  + A  +D         A     A + KY   +     + +A+  +GG+G
Sbjct: 480 IELELAKLMMQKAAALYDAGDDVGAGEA-----ANMAKYAAGEACVKAVDQAVHTLGGNG 534

Query: 424 YIEERSIAR 432
              E  +A+
Sbjct: 535 LTREYGLAK 543


>gi|293605039|ref|ZP_06687432.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816541|gb|EFF75629.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 388

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E    F ++L  LN         +ILI    A  +V   R +L  A+ YA  R V G  +
Sbjct: 231 EEGRGFEYILHGLNPE-------RILI----AAEAVGIGRAALDRAVKYAGERTVFGRPI 279

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +A   + + AA  + F+ A+ +D  +     A  A+ +A    Y  C+ A 
Sbjct: 280 GQNQGIQHPLAQAWMQLEAADLMVFKAASVYDAGQPCGPYANTAKYLAAEAGYNACQTA- 338

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437
                 +  +GG GY +E  + R  RES
Sbjct: 339 ------VMTLGGMGYAKEYHVERLLRES 360


>gi|330947232|gb|EGH47960.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 136

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 348 ILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +  D+P+++       +AD+   I AA  L+   A      ++   EA+ A++ A     
Sbjct: 23  VQFDKPIIEHQSIANLLADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAE 82

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           W C       ++A++  GG GY+E+  + R+YR++    I  GS  
Sbjct: 83  WVC-------SKAIQIHGGYGYLEDYPVERYYRDARITQIYEGSSE 121


>gi|226362039|ref|YP_002779817.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240524|dbj|BAH50872.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 397

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 22/266 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           M    +     LTE+  G+D A + +  ++  D ++ L+G K ++++   +DAF++ A+ 
Sbjct: 116 MAAGELVTAFALTEEHAGSDAAHLRTTAERRGD-VFVLNGSKRYITNAAWADAFLVFART 174

Query: 250 EGR-VGCFLVPRLLEDGSPNG-------LCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +    G   V  L+ D +  G       +     +  +G      VE+   N  G + G 
Sbjct: 175 DASDPGAGGVSALIVDAASPGVRTVLPTIMNGHAEAPVGEIYFDDVEVPAENLLGGVEGQ 234

Query: 302 -LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            L ++   +   ++ +    A   V      L E   +   R   G  L +   ++  + 
Sbjct: 235 GLTMALRGINHARLHV----AATCVGQATRMLEETTAHVNGRKQFGAPLAELGAVQATLG 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +   ++ A  AL+   A SFD       E    RI A   K +  +MA  V    ++ +G
Sbjct: 291 ESFAELEAGRALAIDSARSFDGG-----EIPRHRIAA--AKLYNSEMASRVADRCVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGS 446
           G G +    + R +R+  A  I  GS
Sbjct: 344 GEGIVGPHPVPRMWRDVRALRIYEGS 369


>gi|103488374|ref|YP_617935.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978451|gb|ABF54602.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 527

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 120/302 (39%), Gaps = 41/302 (13%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG L + S  +  ++A   T     +W P+I S    PT                TE   
Sbjct: 219 AGSLGTRSEIAGELIATGGTDAQKAEWLPRIASGAILPTAV-------------FTEPDV 265

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGC--FLVPR 260
           G+D+ ++ ++  + + G + + G K W   +  SD   +LA+      G  G    LVP+
Sbjct: 266 GSDLGSLQTRA-RFAQGRWVIDGAKTWITHAARSDLMTLLARTLPDARGYAGLSMLLVPK 324

Query: 261 LL-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMK 313
               D  P    G+    +   +G R      L+F         LLG +    G  + M+
Sbjct: 325 PRGTDADPFPAAGMSGSEIA-VLGYRGMREYALQFDGMAAPADALLGGVE-GQGFKQLMR 382

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 + +A  +V   R +L   + YA  R   G  +I  P +   +A   +D   A  
Sbjct: 383 TFEGARIQTAARAVGVARRALELGLDYAMNRRQFGRAIIAFPRVADKLAMSVVDFVMARE 442

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA-MECIGGSGYIEERSI 430
           L++  A + D  K    EA  A+++A    +        V A+A ++  GG+GY  E  I
Sbjct: 443 LAYAAARAKDSGKRCDIEAGMAKLLAARAAW--------VNADASLQIHGGNGYALEYEI 494

Query: 431 AR 432
           +R
Sbjct: 495 SR 496


>gi|242021282|ref|XP_002431074.1| acyl-CoA dehydrogenase, putative [Pediculus humanus corporis]
 gi|212516308|gb|EEB18336.1| acyl-CoA dehydrogenase, putative [Pediculus humanus corporis]
          Length = 96

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL I +A  L++R A   D     ++EAA A++ A  T  +C         + ++ +GG
Sbjct: 1   MALQIESARLLTWRAAYLKDNKMPFTKEAAMAKLAASETATFCAH-------QCIQILGG 53

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            GY+ +    RHYR++    I  G+
Sbjct: 54  MGYVTDMPAERHYRDARITEIYEGT 78


>gi|16764219|ref|NP_459834.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167550438|ref|ZP_02344195.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167992106|ref|ZP_02573204.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168236798|ref|ZP_02661856.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168263626|ref|ZP_02685599.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168819983|ref|ZP_02831983.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194735419|ref|YP_002113950.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197262786|ref|ZP_03162860.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204929925|ref|ZP_03220946.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|16419365|gb|AAL19793.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194710921|gb|ACF90142.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197241041|gb|EDY23661.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197290185|gb|EDY29542.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204320919|gb|EDZ06120.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324558|gb|EDZ12397.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205329596|gb|EDZ16360.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205343087|gb|EDZ29851.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347675|gb|EDZ34306.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|261246113|emb|CBG23916.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992616|gb|ACY87501.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157441|emb|CBW16930.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911882|dbj|BAJ35856.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085132|emb|CBY94919.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226439|gb|EFX51490.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616332|gb|EFY13241.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619582|gb|EFY16457.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622722|gb|EFY19567.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628634|gb|EFY25421.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631571|gb|EFY28327.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637098|gb|EFY33801.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641702|gb|EFY38338.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644504|gb|EFY41044.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648437|gb|EFY44889.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654172|gb|EFY50495.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658087|gb|EFY54354.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663561|gb|EFY59763.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670297|gb|EFY66437.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671533|gb|EFY67655.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676889|gb|EFY72956.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682814|gb|EFY78833.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686493|gb|EFY82475.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323129164|gb|ADX16594.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323194610|gb|EFZ79803.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196800|gb|EFZ81944.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204812|gb|EFZ89807.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208960|gb|EFZ93897.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209721|gb|EFZ94648.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215203|gb|EFZ99948.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222429|gb|EGA06805.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227529|gb|EGA11689.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229881|gb|EGA14004.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233106|gb|EGA17202.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240841|gb|EGA24883.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243158|gb|EGA27178.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248699|gb|EGA32627.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251701|gb|EGA35568.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257515|gb|EGA41203.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261484|gb|EGA45065.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267915|gb|EGA51394.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272018|gb|EGA55433.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332987789|gb|AEF06772.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAVKREDR-YVINGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+L +           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLVRTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|306826154|ref|ZP_07459489.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431630|gb|EFM34611.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 425

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+DIA  + +  +++ D  + L+G K W   S  +D   + A+   +G+V C
Sbjct: 167 FALTEPLSGSDIAGGLATTAERVGDK-WILNGEKRWIGGSDTADVVPVFARDVADGKVKC 225

Query: 256 FLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           F+V    P    +  P+ +  + ++N  G+ +   VE+  S+     L ++N   G V  
Sbjct: 226 FIVRKGAPGYHAEPIPHKIALRCVRN--GHITMKNVEVPDSDR----LVNIN-GFGDVAR 278

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +      D A +++     S   A+ YA+ R      +    +++  +A +  +  A  A
Sbjct: 279 ILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAVIA 338

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+A   ++       +A A++   +       +    +A A E  GG+G   E  +A
Sbjct: 339 YSTRIAEMQEKGNELMLNSALAKMHNSL-------VMRETVALARETCGGNGITLETDVA 391

Query: 432 RHYRESPANSILLGSG--NAMVL 452
           R + ++ +     GS   NA+++
Sbjct: 392 RFFADAESIYTYEGSHEVNALIV 414


>gi|306806715|ref|ZP_07443383.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu007]
 gi|306966911|ref|ZP_07479572.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu009]
 gi|308346734|gb|EFP35585.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu007]
 gi|308355307|gb|EFP44158.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu009]
          Length = 650

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I L  L++  +S+  +   +A +A+  AR   V   +   +PV +     +A  I+   A
Sbjct: 282 IALTTLNAGRLSLPAIATGVAKQALKIAREWSVER-VQWGKPVGQHEA--VASKISFIAA 338

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+
Sbjct: 339 TNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESL 398

Query: 431 -ARHYRESPA---------NSILLGSGNAMVL 452
            AR  R  P          N I  GS   M L
Sbjct: 399 AARGERAVPVEQMVRDLRINRIFEGSSEIMRL 430


>gi|225556879|gb|EEH05166.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 383

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E +N F  ++ D+N         +ILI  ++  +  + +R     A  YA  R V G  +
Sbjct: 220 EENNGFKMIIHDMNAE-------RILIAAEALGLGYAALR----RAAKYANERQVFGRPI 268

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +AD  +++ AA  + ++ A  +D   +  E        A  TKY   + A 
Sbjct: 269 GQSQGIQHPLADSWMNLEAARLMVYQAARMYDAGYTSGE-------YANATKYLAAEAAF 321

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437
                A+   GG GY  E  + R+ RE+
Sbjct: 322 RACERAVMSHGGMGYAGEYHVERYLREA 349


>gi|328884242|emb|CCA57481.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 377

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 52/300 (17%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    + W P              +   S+ +  G+TE   G++
Sbjct: 79  VVSPAICG-TVIARFGTEEQKRAWLPG-------------LADGSLTMAFGITEPDAGSN 124

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGC-----FLVPRLLE 263
              IT+  ++  DG + L+G K F+S   ++DA +++ +  + R G      F+VPR + 
Sbjct: 125 SHRITTTAERTEDG-WVLNGRKVFVSGVDIADATLIVGRTSDARTGSLKPCLFIVPREVP 183

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLD- 319
                   +QR   ++   +N          F   L D+++    +   ED  +L     
Sbjct: 184 G-------FQRRHIEMELDAN-------EKQFELTLDDVHLPADALVGDEDAGLLQLFAG 229

Query: 320 -------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                  +A  ++   R +LA+A+ YA+ R V    +     +   +A   +++  A  +
Sbjct: 230 LNPERIMTAAFAIGMGRYALAQAVKYAKERQVWKAPIGAHQAIAHPLAQAHIELELARLM 289

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A  +D        A  A  MA       C  A   + +A+  +GG+G  +E  +AR
Sbjct: 290 MAKAAQLYDAGDDMG--AGEAANMAKYAAAEACVRA---VDQAVHTLGGNGLTKEFGLAR 344


>gi|323220097|gb|EGA04564.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
          Length = 115

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 7/98 (7%)

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +A+ I     +  ++A   D  +S    AA A++       +C + A  VI 
Sbjct: 11  MIQEKLALMAIKIENMRNMVLKVAWQADREESLRTSAALAKL-------YCARTAMEVID 63

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 64  DAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 101


>gi|120404297|ref|YP_954126.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957115|gb|ABM14120.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 414

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 30/248 (12%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQV-EG---------RVGCFLVPRLLEDGSPNGLCYQR 274
           Y L+G K F+++ P +D  ++ A++ EG         +V  F++     D   +G    +
Sbjct: 170 YILNGQKTFITNGPDADVVVVYAKLDEGDPSIDKRDRKVLTFVL-----DKGMDGFVQSK 224

Query: 275 LKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              K+G  S+ T EL F++       LLG+   ++G            +  + V+ M + 
Sbjct: 225 PFRKMGIHSSRTGELFFNDVRLGRDRLLGETEDNSGGDGRDSARSNFSAERIGVAAMSLG 284

Query: 332 LAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + E      + YA+ R + G  +    +++  +A + +       + FR+     EA   
Sbjct: 285 VIEECLRLCVDYAKSRTLWGKEIAQFQLIQLKLATMEVARMNVRNMLFRVI----EAAQT 340

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + A   A   K++C + A  V  EA++  GG+GY+ E  + +  R++ +  I  GS
Sbjct: 341 GTPISLAE--ASAIKWYCSQAATDVAMEAVQVFGGNGYMTEYRVEQLARDAKSLMIYAGS 398

Query: 447 GNAMVLDV 454
               +  V
Sbjct: 399 NEVQITHV 406


>gi|114656359|ref|XP_001142955.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 4 [Pan
           troglodytes]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 38/235 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + + PK+ S EY              IG L ++E   G+D+ ++  + +K  +  Y L+G
Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191

Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +K W  + P +D  I+     LA V    G  +   ++E G P G    +  +K+G R +
Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336
            T EL F +       +LG  N          ++  LD   + ++G     M+  L   I
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++ A
Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCA 358


>gi|121611709|ref|YP_999516.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121556349|gb|ABM60498.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 390

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 102/263 (38%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  D  Y ++G K W      SD  I+LA+          
Sbjct: 125 MGVTEPGTGTDTTKIKTSAVKKGD-RYLVNGQKVWISRVQHSDWMILLARTTPLAEVARK 183

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L     +G+  + + N + + +N   EL F N               
Sbjct: 184 SEG-MSIFMVD--LRQAEKSGMTVRPIPNMVNHETN---ELFFENLEIPAENLIGQEGQG 237

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      +     YA+ R+V G  +     
Sbjct: 238 FRYILDGLNAE-------RTLI----AAECIGDGYWFIDRITRYAKERNVFGRPIGQNQG 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA  + ++    FD  +S   +A  A       KY   K +      
Sbjct: 287 VQFPIAQAYIELEAANLMRWQACALFDAQQSCGAQANMA-------KYLAAKASWEAANV 339

Query: 415 AMECIGGSGYIEERSIARHYRES 437
            ++  GG G+  E  + R +RE+
Sbjct: 340 CLQYHGGFGFACEYDVERKFRET 362


>gi|325675428|ref|ZP_08155112.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553399|gb|EGD23077.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 53/264 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG------ 251
            GLTE   G+D     ++ + + DG + ++G+K F+++  +D    + +  V G      
Sbjct: 128 FGLTEPGAGSDAGGTRTKAELV-DGEWVINGNKQFITNSGTDITKLVTVTAVTGTKENGR 186

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             +   LVP      S  G   +   +K+G  ++ T  L F +       LLG+     G
Sbjct: 187 KEISTILVPT-----STPGFTAEPAYDKVGWNASDTHPLTFQDVRVPEANLLGER--GRG 239

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               ++IL    +  A ++V   +  + E++ YA+ R   G     +P            
Sbjct: 240 YANFLRILDEGRIAIAALAVGAAQGCVDESVRYAKEREAFG-----RP------------ 282

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYA------------RIMAPITKYWCCKMAPAVIA 413
           I A  A+ F++A    EA++ +  AAY             +  A I K    + A     
Sbjct: 283 IGANQAIEFKIARM--EARAHTARAAYYDAAALMLSGKPFKKQASIAKLVASEAAMDNAR 340

Query: 414 EAMECIGGSGYIEERSIARHYRES 437
           +A +  GG G++ E  +ARHYR+S
Sbjct: 341 DATQIFGGYGFMNEYPVARHYRDS 364


>gi|241765390|ref|ZP_04763362.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241364867|gb|EER59826.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 371

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 25/161 (15%)

Query: 222 SDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           + G Y L+  K  + +   +DAFI+ AQ++G++  FLV R     + NG+  Q    + G
Sbjct: 142 AQGGYALTATKSIVPAGDQADAFIVPAQLDGKMALFLVER-----TANGVTTQGYVTQDG 196

Query: 281 NRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +R+    E++ +N       T G    +L V TG            +   +V  M  ++A
Sbjct: 197 SRA---AEVKLTNAPATLITTDGLAALELAVDTGIAA---------TCAEAVGVMDKTVA 244

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
             + Y  +R   G  +     ++  +AD+ + +  A ++S+
Sbjct: 245 ITVEYMNQRKQFGVFIASFQALRHRVADMKMQLELARSMSY 285


>gi|15608013|ref|NP_215388.1| acyl-CoA dehydrogenase FADE10 [Mycobacterium tuberculosis H37Rv]
 gi|15840287|ref|NP_335324.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31792061|ref|NP_854554.1| acyl-CoA dehydrogenase FADE10 [Mycobacterium bovis AF2122/97]
 gi|121636796|ref|YP_977019.1| putative acyl-CoA dehydrogenase fadE10 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660650|ref|YP_001282173.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium tuberculosis H37Ra]
 gi|148822081|ref|YP_001286835.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis F11]
 gi|167966827|ref|ZP_02549104.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis H37Ra]
 gi|215410459|ref|ZP_03419267.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429731|ref|ZP_03427650.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis EAS054]
 gi|215445013|ref|ZP_03431765.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T85]
 gi|218752539|ref|ZP_03531335.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis GM 1503]
 gi|224989267|ref|YP_002643954.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800105|ref|YP_003033106.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN 1435]
 gi|254231181|ref|ZP_04924508.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis C]
 gi|254363804|ref|ZP_04979850.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549850|ref|ZP_05140297.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185769|ref|ZP_05763243.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis CPHL_A]
 gi|260199893|ref|ZP_05767384.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T46]
 gi|260204075|ref|ZP_05771566.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis K85]
 gi|289442283|ref|ZP_06432027.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T46]
 gi|289446438|ref|ZP_06436182.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis CPHL_A]
 gi|289555346|ref|ZP_06444556.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN 605]
 gi|289573499|ref|ZP_06453726.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis K85]
 gi|289752928|ref|ZP_06512306.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis EAS054]
 gi|289756958|ref|ZP_06516336.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T85]
 gi|289761004|ref|ZP_06520382.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis GM 1503]
 gi|294996353|ref|ZP_06802044.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium tuberculosis 210]
 gi|297633390|ref|ZP_06951170.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium tuberculosis KZN 4207]
 gi|297730375|ref|ZP_06959493.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium tuberculosis KZN R506]
 gi|298524365|ref|ZP_07011774.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774998|ref|ZP_07413335.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu001]
 gi|306782087|ref|ZP_07420424.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu002]
 gi|306783543|ref|ZP_07421865.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu003]
 gi|306787907|ref|ZP_07426229.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu004]
 gi|306792248|ref|ZP_07430550.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu005]
 gi|306796646|ref|ZP_07434948.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu006]
 gi|306802533|ref|ZP_07439201.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu008]
 gi|306971106|ref|ZP_07483767.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu010]
 gi|307078834|ref|ZP_07488004.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu011]
 gi|307083394|ref|ZP_07492507.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu012]
 gi|313657702|ref|ZP_07814582.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039982|sp|P63430|Y897_MYCBO RecName: Full=Uncharacterized protein Mb0897
 gi|54042350|sp|P63429|Y873_MYCTU RecName: Full=Uncharacterized protein Rv0873/MT0896
 gi|3261551|emb|CAA17679.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE10 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880448|gb|AAK45138.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31617648|emb|CAD93758.1| PROBABLE ACYL-COA DEHYDROGENASE FADE10 [Mycobacterium bovis
           AF2122/97]
 gi|121492443|emb|CAL70911.1| Probable acyl-CoA dehydrogenase fadE10 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600240|gb|EAY59250.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis C]
 gi|134149318|gb|EBA41363.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504802|gb|ABQ72611.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium tuberculosis H37Ra]
 gi|148720608|gb|ABR05233.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis F11]
 gi|224772380|dbj|BAH25186.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321608|gb|ACT26211.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN 1435]
 gi|289415202|gb|EFD12442.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T46]
 gi|289419396|gb|EFD16597.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis CPHL_A]
 gi|289439978|gb|EFD22471.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN 605]
 gi|289537930|gb|EFD42508.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis K85]
 gi|289693515|gb|EFD60944.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis EAS054]
 gi|289708510|gb|EFD72526.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis GM 1503]
 gi|289712522|gb|EFD76534.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T85]
 gi|298494159|gb|EFI29453.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216352|gb|EFO75751.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu001]
 gi|308325233|gb|EFP14084.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu002]
 gi|308331643|gb|EFP20494.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu003]
 gi|308335454|gb|EFP24305.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu004]
 gi|308339171|gb|EFP28022.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu005]
 gi|308342905|gb|EFP31756.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu006]
 gi|308350647|gb|EFP39498.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu008]
 gi|308359246|gb|EFP48097.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu010]
 gi|308363156|gb|EFP52007.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu011]
 gi|308366810|gb|EFP55661.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis SUMu012]
 gi|323720582|gb|EGB29660.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis CDC1551A]
 gi|326904908|gb|EGE51841.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis W-148]
 gi|328459843|gb|AEB05266.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis KZN 4207]
          Length = 650

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I L  L++  +S+  +   +A +A+  AR   V   +   +PV +     +A  I+   A
Sbjct: 282 IALTTLNAGRLSLPAIATGVAKQALKIAREWSVER-VQWGKPVGQHEA--VASKISFIAA 338

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+
Sbjct: 339 TNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESL 398

Query: 431 -ARHYRESPA---------NSILLGSGNAMVL 452
            AR  R  P          N I  GS   M L
Sbjct: 399 AARGERAVPVEQMVRDLRINRIFEGSSEIMRL 430


>gi|194444953|ref|YP_002040098.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|207856292|ref|YP_002242943.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|194403616|gb|ACF63838.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|206708095|emb|CAR32386.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326627152|gb|EGE33495.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAVKREDR-YVINGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+L +           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLVRTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|306828629|ref|ZP_07461823.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
 gi|304429237|gb|EFM32323.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
          Length = 425

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 25/263 (9%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGC 255
             LTE   G+DIA  + +  +++ D  + L+G K W   S  +D   + A+   +G+V C
Sbjct: 167 FALTEPLSGSDIAGGLATTAERVGDK-WILNGEKRWIGGSDTADVVPVFARDVADGKVKC 225

Query: 256 FLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           F+V    P    +  P+ +  + ++N  G+ +   VE+  S+     L ++N   G V  
Sbjct: 226 FIVRKGAPGYHAEPIPHKIALRCVRN--GHITMKNVEVPDSDR----LVNIN-GFGDVAR 278

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +      D A +++     S   A+ YA+ R      +    +++  +A +  +  A  A
Sbjct: 279 ILTFTRADVAHIAMGVTCGSYVAALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAVIA 338

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            S R+A   ++       +A A++   +       +    +A A E  GG+G   E  +A
Sbjct: 339 YSTRIAEMQEKGNELMLNSALAKMHNSL-------VMRETVALARETCGGNGITLETDVA 391

Query: 432 RHYRESPANSILLGSG--NAMVL 452
           R + ++ +     GS   NA+++
Sbjct: 392 RFFADAESIYTYEGSHEVNALIV 414


>gi|288919436|ref|ZP_06413768.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349130|gb|EFC83375.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 31/273 (11%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--- 247
           + K  + + + +TE   G+D+A I +   +  D  Y ++G K F+S+  +   ++ A   
Sbjct: 123 IAKGDLIVAVAMTEPGTGSDLAGIRTSAVRDGDH-YVVNGSKTFISNGQNADLVVTAVRT 181

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G  L+  ++E  SP G    R   KIG  +  T EL FS        D+ V   
Sbjct: 182 SEDPHKGLSLM--VIEADSP-GFGRGRNLEKIGLHAQDTSELFFS--------DVRV--- 227

Query: 308 PVEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           PVE++          ++  L    +S++   ++  E +      +V+      +PV   A
Sbjct: 228 PVENLLGAEGSGFLGLMKNLPQERLSIAAGAIAATEGVLERTLSYVTERKAFGKPVG--A 285

Query: 359 IADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             +    +A     + R++  + D+  +R          A   K+W  +    ++   ++
Sbjct: 286 FQNTRFQLAEMVTAA-RVSRVYIDDLITRHTAGEVTAAEAAAAKFWTTEQLVDIVGRCLQ 344

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             GG GY+ E  IA+ Y +S   +I  G+   M
Sbjct: 345 LHGGYGYMLEYRIAQDYLDSRITTIYGGTTEIM 377


>gi|218780165|ref|YP_002431483.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761549|gb|ACL04015.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 396

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 115/270 (42%), Gaps = 40/270 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257
           + +TE   G+D  +I  Q   + DG  + L+G K F++ +   DA ++ A V+   G   
Sbjct: 125 MAITEPGSGSDAGSI--QTTAVLDGDEWVLNGEKIFVTCADRCDAVVVWANVDPSAGKAG 182

Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDM 312
           +   ++E G+P G   ++L++K+G R+        S+T  F L D  +      G  E  
Sbjct: 183 IKSFIVEKGTP-GFTLEKLEHKLGIRA--------SDTGTFFLKDCRIPKDNILGSAEVK 233

Query: 313 K-------ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILIDQ-------PVMKR 357
           K       ++   D+    V+ M   +A A + + +++    GI +D          M++
Sbjct: 234 KSTEGFKGVMKTFDNTRPMVASMSNGVAGASLEFLKQKMEEAGIALDYNENTNNVSAMQK 293

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
               +  ++ A   L+++       A   ++E  +  + A ++K    +    +  +  E
Sbjct: 294 EYYMMEANLEAMRLLTYK-------ASWMADEKIFNNVEASMSKAKAGRAGTLITQKVCE 346

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSG 447
            +G  G+  E    +  R+S    I  G+G
Sbjct: 347 LLGSMGFTREHLAEKWMRDSKILDIFEGTG 376


>gi|332283920|ref|YP_004415831.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330427873|gb|AEC19207.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 388

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +L +A +YA+ R V G  +     ++  +A   +++ AA  + F  A+ +D+      
Sbjct: 259 RAALRKATNYAKERVVFGRPIGQNQGIQHPLAACWMELEAANLMVFHAASLYDQGDQAGT 318

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +A  A+ +A    +  C+ A       +   GG GY +E  + R+ RE
Sbjct: 319 QANAAKYLAGEAGFNACQTA-------VMTHGGFGYAKEYHVERYLRE 359


>gi|218290800|ref|ZP_03494877.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239235|gb|EED06435.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 383

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 53/290 (18%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           APM      + + +TE   G+D+A I ++ ++  D  Y ++G K  +S + ++DAF++ A
Sbjct: 111 APMAAGERLMAIAITEPGAGSDVAQIAARAERDGDR-YVITGEKSGISLASVADAFVVFA 169

Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKN----KIGNRS----NATVELEF--- 291
           + +   G      FLVPR        G+   R ++     IG  S       V +E+   
Sbjct: 170 KTQVDAGARGVSAFLVPR-----EAPGVEVHRYEDMGHVAIGRGSVFLERVEVPIEYRIG 224

Query: 292 --SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
             +  F  L+   ++S       ++LI L     ++     SL E   + RRR   G  L
Sbjct: 225 EENRAFYQLMKGFDLS-------RVLICLQCLGAAMQ----SLDETADHVRRRRAFGRPL 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +   + +    I      S+R     D     ++EA+            C  + P
Sbjct: 274 AQFQGVAFPLVEYHTQIEMIRWFSYRALWLRDRGLPHTKEASM-----------CKWLGP 322

Query: 410 AVIAEAM-ECI---GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            V A+A+ ECI   G  GY ++  + +  R+     + +G G A    ++
Sbjct: 323 QVAAQAIHECILLHGHYGYTKDLPLEQRLRD--VIGLEIGDGTAQTQKIV 370


>gi|66826747|ref|XP_646728.1| hypothetical protein DDB_G0270350 [Dictyostelium discoideum AX4]
 gi|60474588|gb|EAL72525.1| hypothetical protein DDB_G0270350 [Dictyostelium discoideum AX4]
          Length = 277

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 28/180 (15%)

Query: 38  SSDSLLV-ALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           S D+ L+ AL    P+ + KE+E      GE V+     EL R +  N P+L  Y   G+
Sbjct: 2   SEDTQLIRALQRVLPAKILKEIEGDLTQFGERVVK-DILELGRASENNPPKLIQYDAWGK 60

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R DK+    +W+ L      +GL    ++R ++   R   +     ++YL          
Sbjct: 61  RIDKIVVDESWNKLKDIGCSEGLVSIGYERKYQEYSRIYQY----IKIYLF--------- 107

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A   A+   P    D A ++     D   K    K     G  +TEK GG+D++
Sbjct: 108 ------ACSSAVFDCPMSMTDGAARLIELYGDKGMKEDEYKHE---GQWMTEKTGGSDVS 158


>gi|218461618|ref|ZP_03501709.1| acyl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 28/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQ--------- 248
           L +TE   G+D+  +    ++  DG  + ++G K F+S + ++D  I+ A          
Sbjct: 122 LAITEPDAGSDMRGMKCAARR--DGADFVINGTKHFISHADVADFVIVFAATGEEETPKG 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
           ++ ++  FLV R    G+P G    +  + + +R      L F++       +LG+++  
Sbjct: 180 IKKKITAFLVDR----GTP-GFEILKGYDSVSHRGYHNSTLSFTDCRIPEAQVLGEVHRG 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       L  A   V   R     A+ YA  R   G  +     +   +AD+  +
Sbjct: 235 FDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGRPIGANQGVSFKLADMITE 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+   A   D   S   + A A++ A        +M   V  EA++  GG G +
Sbjct: 295 IDAADWLTLAAAWRLDTGLSADRQIASAKLYA-------SEMLARVTDEAIQIYGGMGLM 347

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  +AR +R++    I  G+
Sbjct: 348 DDLPLARFWRDARVERIWDGT 368


>gi|163756359|ref|ZP_02163473.1| isocitrate lyase [Kordia algicida OT-1]
 gi|161323711|gb|EDP95046.1| isocitrate lyase [Kordia algicida OT-1]
          Length = 603

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 57/282 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++  ++ FI+ A++E    +  F+
Sbjct: 152 LTEPGAGSDANSGKTKAVLSEDGKHYLISGQKMWISNAGFAEIFIVFARIEDDKNITGFI 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303
           V    +  +PNG+     ++K+G  S++T ++ F+ T              F   +  LN
Sbjct: 212 VE--FDKDNPNGMTLGEEEHKLGIHSSSTRQVFFNETKVPVENMLSERGNGFKIAMNALN 269

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358
           V           I L +A +     R  + EA  YA  R     I    P+     +K  
Sbjct: 270 VGR---------IKLAAACLDAQ--RRVITEATKYANER-----IQFKTPIAKFGAIKAK 313

Query: 359 IADIALDIAAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWC 404
           +A++A       +  +R A              N+  EA+ +  E  YA I   I K   
Sbjct: 314 LAEMATSCYVGESACYRAAKNIEDRIAIRESEGNTHQEAELKGVE-EYA-IECSILKVKI 371

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +    V  E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 372 SEDIQNVTDEGIQIFGGMGFSADTPMESAWRDARISRIYEGT 413


>gi|238790512|ref|ZP_04634280.1| hypothetical protein yfred0001_480 [Yersinia frederiksenii ATCC
           33641]
 gi|238721381|gb|EEQ13053.1| hypothetical protein yfred0001_480 [Yersinia frederiksenii ATCC
           33641]
          Length = 383

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEGR 252
           A  L LTE   G+D  + T+   + +  +Y L+G K F++      ++++     + +  
Sbjct: 119 AYALALTEPGAGSDNNSATTSYTRNNGKVY-LNGQKTFITGAKEYPYMLVLARDPEPKDP 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL-LGDLNV 304
              F +   +E   P G+    L +KIG    +T       VE++ S+  G   +G LNV
Sbjct: 178 KKAFTL-WWVESNRP-GIKINPL-HKIGWHMLSTCEVYLDNVEVDESDMVGEEGMGFLNV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                 +M+ LI   +A  S      +  +A  YA +R   G  +    +++  +  +A+
Sbjct: 235 MYN--FEMERLI---NAARSTGFAECAFEDAAKYANQRIQFGKPIGHNQMIQEKLVLMAV 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I     +  ++A   D  +S        R  A + K +C + A  VI +A++ +GG GY
Sbjct: 290 KIENMRNMVLKVAWQADMHQS-------LRTSAAMCKLYCARTALEVIDDAIQIMGGLGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
            ++  ++R +R+     I  G+   M+
Sbjct: 343 TDDARVSRFWRDVRCERIGGGTDEIMI 369


>gi|198244664|ref|YP_002214823.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197939180|gb|ACH76513.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326622576|gb|EGE28921.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAIKREDR-YVITGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+L +           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLVRTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|115525773|ref|YP_782684.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115519720|gb|ABJ07704.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 380

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 30/245 (12%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR------VGCF 256
           EK    D+A + +  +K  DG Y + G K+  L+   +D F++ A+  G       VG F
Sbjct: 127 EKSSRYDLADVATTAKKNGDG-YVIDGDKFVVLNGGSADVFVVTARTAGGQRDRNGVGVF 185

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIG----NRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           LVP         G+  +    + G    + S   VE+      G     + +    V+D 
Sbjct: 186 LVP-----ADAKGISKKSYPTQDGLHAADISFTGVEVGADAAIGDSGNAIELIERVVDDA 240

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD--IALDIAAAT 370
           +  +  ++    V  M  SL   + Y + R   G  +    V++   AD  +AL+ A + 
Sbjct: 241 RAALCAEA----VGAMEESLKTTVEYMKTRSQFGVPIASFQVLQHRAADMFVALEQARSM 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A+   +A   D+AK R+   A A++    +  +  +       +A++  GG G   E  I
Sbjct: 297 AMFATMAADSDDAKERATSIAAAKVQVGRSLKFIGE-------QAIQLHGGIGMTMEAKI 349

Query: 431 ARHYR 435
             +++
Sbjct: 350 GHYFK 354


>gi|119387185|ref|YP_918240.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377780|gb|ABL72544.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 381

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 13/98 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D AA+ ++ +++  G + L+G K F+S    SD ++++ +  G+ G    PR
Sbjct: 124 LTEPGSGSDAAALRTRAERVEGG-WKLNGTKAFISGGSYSDCYLVMVRT-GQDG----PR 177

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                ++E G+P GL +  L++K+G ++  T +++F +
Sbjct: 178 GISTMVVEAGTP-GLSFGALEHKMGWKAQPTAQVQFDD 214


>gi|294633001|ref|ZP_06711560.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830782|gb|EFF89132.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 25/272 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLA 247
           P     +   + ++E   G+D +   +  ++  +G + ++G K + S   +D  +  ML 
Sbjct: 114 PFIDGEIRFSVSISEPEAGSDASNTKTHARRDENGDWIVNGSKLWCSGAAADDTVIAMLV 173

Query: 248 QVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           + +     G +   L+P    + +P GL  ++L   +   +  T E+   +       LL
Sbjct: 174 RTDNADKHGGLSVLLIP----NDTP-GLDIRKLPT-LSRHATGTTEIFLDDVRVPGENLL 227

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G++      + D   L     A       + ++  A  YA++R   G  + +  V+K  +
Sbjct: 228 GEVGQGWKIITDHLELERCAVAAAYTGNAQEAVNAANRYAQQRIQFGKPIYEFQVLKHML 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+    + AA  L +R A    E    + E + A++    T   C         + M+ +
Sbjct: 288 AENQTRVDAARLLCYRAARMKAEGLPAARETSMAKLYGSETLKQCA-------LDGMQIL 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG   + E  + R+ RES  ++I  G G + +
Sbjct: 341 GGYANLPEADMERYLRESVQSTI--GGGTSQI 370


>gi|291239577|ref|XP_002739697.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain-like
           [Saccoglossus kowalevskii]
          Length = 343

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 7/130 (5%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   I Y   R   G  + D   M   I+   + + AA  +++  A   D     ++EA
Sbjct: 217 ALNHVIPYTISRKQFGHSIFDFQSMNHQISKAVIQLEAAKLMTYNAARLKDAGLPFTKEA 276

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A+ M+  T  W       V ++ ++ +GG G  +   + +++R+    +I  G+ N  
Sbjct: 277 AMAKYMSSETASW-------VTSKCIDWMGGLGITKGFQVEKYFRDCKVGTIYEGTSNIQ 329

Query: 451 VLDVLNLLEK 460
           +  +   L +
Sbjct: 330 LNTIAKFLRQ 339


>gi|119716829|ref|YP_923794.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119537490|gb|ABL82107.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 456

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 17/114 (14%)

Query: 338 YARRRHVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           Y + R   G     +PV  R      +ADIA+++ A   L+++ A      K  + E A 
Sbjct: 352 YVKERQAFG-----EPVAHRQSVAFMVADIAIELQAMRLLTWKAAARAAAGKDFAREVAL 406

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           AR +       C +    +  + ++ +GG GY++E  + R YR+  A  ++ G+
Sbjct: 407 ARRL-------CAEKGMQIGNDGVQLLGGHGYVKEHPVERWYRDLRAIGVMEGA 453


>gi|54027013|ref|YP_121255.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018521|dbj|BAD59891.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 48/261 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSD--AFIMLAQVEG----- 251
            GLTE   G+D  A  ++   ++DG  + ++G K F+++  +D    + +  V G     
Sbjct: 128 FGLTEPDAGSD--ASGTRTTAVADGEDWVINGRKQFITNSGTDITKLVTVTAVTGSQDGR 185

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +   LVP         G   +   NK+G  ++ T  L F+        D+ V   P E
Sbjct: 186 KEISTILVPT-----DTPGFVAEPAYNKVGWNASDTHPLSFT--------DVRV---PQE 229

Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
           ++           L  LD   ++++ + V  A     E++ YA+ R   G  +     + 
Sbjct: 230 NLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVRYAKERLAFGKPIGSYQAVA 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA +     AA A  +  A      K   ++A+ A+++A        + A     +A 
Sbjct: 290 FKIARMEARAHAARAAYYDAAALMLAGKPFKKQASIAKLVA-------SEAAMDNARDAT 342

Query: 417 ECIGGSGYIEERSIARHYRES 437
           +  GG+G++ E ++ARHYR+S
Sbjct: 343 QIFGGNGFMNEYAVARHYRDS 363


>gi|88810404|ref|ZP_01125661.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88792034|gb|EAR23144.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 153

 Score = 39.7 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L  A  Y ++R   G  L +   ++  +AD+A ++ AA  L    A   
Sbjct: 12  ATCSIGTAQTALEAARGYLQQRRQFGRALAEFQGLQFKLADMATELVAARQLVRLAAWKL 71

Query: 381 DEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D     +    A A+ +A    +  C        +A++  GG GYI E  + R+ R++  
Sbjct: 72  DRRDPNATTYCAMAKRLATDVGFRVCN-------DALQLYGGYGYIREYPLERYVRDTRV 124

Query: 440 NSILLGSGNAM 450
           + IL G+   M
Sbjct: 125 HQILEGTNEIM 135


>gi|119504763|ref|ZP_01626841.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459368|gb|EAW40465.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
          Length = 393

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
            G+TE   GTD   I +   +  D  Y ++G K W   +  SD  ++L +   R  C   
Sbjct: 128 FGVTEPNSGTDTTRIRTHAVQDGDD-YVVNGQKIWISRAEHSDLLVLLVRTTPREDCAKR 186

Query: 256 ------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
                  LV   +      GL  + +K  +   ++   EL F +               F
Sbjct: 187 SDGMSVLLVD--MRTAVGRGLTIKPIKTMM---NHGATELFFDDLRVPMANRIGEEGKGF 241

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI    A   +   +  +  +  YA  R V G  +     +
Sbjct: 242 RYILDGMNAE-------RILI----AAECIGDAKYFVEASAKYASEREVFGAPIAKNQGV 290

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA   +   AA  +  R  + F+  +S   EA  A+++A    +       A     
Sbjct: 291 QFPIARAHIQAQAAAGMVRRAIDLFEAGESCGSEANMAKLLASEASW-------AAGDTC 343

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG+G+  +  I R +RE+
Sbjct: 344 IQTFGGAGFATDYDIERKFRET 365


>gi|55581716|emb|CAH55629.1| putative acyl-CoA dehydrogenase, PigA [Serratia sp.]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 14/251 (5%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR- 260
           TE   G+DI  + +  Q    G Y L+G K F++ +P++D FI+ A+     G   V   
Sbjct: 128 TEPDAGSDIYNMQATAQPCEGG-YILNGKKIFITNAPIADVFIIYAKTNPDHGFLGVSAF 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           L+E G+P GL    +  K    +    E+ F++ F      +G          D  I   
Sbjct: 187 LIEKGTP-GLNVGEVIPKDCLSNCPWSEIVFNDIFIPQSQRIGMEGAGGAIFHDSMIWEK 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              + + V G+   L   + YA+ R   G  +     +   I D+ L +     + +R  
Sbjct: 246 GCLSALFVGGLARLLETTLEYAKARQQFGKAIGQFQSVSNRIIDMKLRLEQCRLMLYRAC 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ +    + A ++++  I++Y     A     +A++  GG+   +E  + RH    
Sbjct: 306 WKHDQGQDAEADIAMSKLL--ISEY-----AVQSGLDAIQTFGGAAMDQELGLVRHLLNM 358

Query: 438 PANSILLGSGN 448
             + I  G+ +
Sbjct: 359 IPSRIFSGTND 369


>gi|219556736|ref|ZP_03535812.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T17]
 gi|289568836|ref|ZP_06449063.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T17]
 gi|289542590|gb|EFD46238.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T17]
          Length = 567

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I L  L++  +S+  +   +A +A+  AR   V   +   +PV +     +A  I+   A
Sbjct: 282 IALTTLNAGRLSLPAIATGVAKQALKIAREWSVER-VQWGKPVGQHEA--VASKISFIAA 338

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+
Sbjct: 339 TNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESL 398

Query: 431 -ARHYRESPA---------NSILLGSGNAMVL 452
            AR  R  P          N I  GS   M L
Sbjct: 399 AARGERAVPVEQMVRDLRINRIFEGSSEIMRL 430


>gi|62179421|ref|YP_215838.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224582671|ref|YP_002636469.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|62127054|gb|AAX64757.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224467198|gb|ACN45028.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322713891|gb|EFZ05462.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAVKREDR-YVINGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+L +           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLVRTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|332795998|ref|YP_004457498.1| acyl-CoA dehydrogenase domain-containing protein [Acidianus
           hospitalis W1]
 gi|332693733|gb|AEE93200.1| acyl-CoA dehydrogenase domain-containing protein [Acidianus
           hospitalis W1]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 42/281 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR 252
           +G+  TE  GG+D+A + +  +K  +G Y ++G K ++S       M    + L +  G+
Sbjct: 121 LGIASTEPSGGSDVANLKTSAKK-EEGKYVINGEKAYISGVMEAKEMGGGHLTLVRTGGK 179

Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
               +    VP      +  G+   R++N +G    +T  +++ N      FL+G+ N  
Sbjct: 180 GHKGISMIYVPI-----NSEGITVSRIEN-MGRMGISTGIIKYDNVRIDEKFLVGEENKG 233

Query: 306 TGPVED----MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                D     ++L+    A   +      L E + Y + R   G  L D   +    A+
Sbjct: 234 FYYAMDGFNHARVLV----ASACIGSAEAILEEGLKYIKEREAFGVKLKDLQSIAFEAAE 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAME 417
           +   +  A  L ++ A   D  +   +E    +A A+++AP T +        VI   M 
Sbjct: 290 LYTKLEMARLLVYKSAWMLDHEEKFKDEIPKFSAMAKLIAPQTAF-------DVIKSVMI 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             G  GY ++  I    R     S L+G+  A  L+++ L+
Sbjct: 343 WFGAYGYTKDALIESGMR--GLMSYLVGAEGA--LNIMKLI 379


>gi|297192995|ref|ZP_06910393.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151600|gb|EFH31263.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 469

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 22/246 (8%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVG-- 254
           +  GL+E+R G+DI A  +  ++ ++G + L G KW + ++ ++D  ++ A+   R G  
Sbjct: 121 LAWGLSERRHGSDILANDTTARR-TEGGWLLDGEKWTIGNATVADVVMVFARTSERGGPG 179

Query: 255 ---CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
               F V +  + DG    L  + L    G R      +   N F     LLG       
Sbjct: 180 GYSVFAVEKAAVPDGGLEHLPDEPLH---GLRGLDMSGVRLRNCFVPDSALLGRAGQGLE 236

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                  L  +  A +++S +  +L   + +A RR + GG + + P  +R + +   D+ 
Sbjct: 237 TALKSSQLARVAIASIAMSCVDTALRTTLDFAVRRTIFGGPVFEVPYSQRQLVESFADLL 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              AL+     S   +  +      A I + + KY+        +      +G   Y+  
Sbjct: 297 VTDALTTGAVRSLQLSPDQ------ASIWSSVVKYFVPTFLEETLGRLSTVLGARYYL-- 348

Query: 428 RSIARH 433
           RS  RH
Sbjct: 349 RSHPRH 354


>gi|296169206|ref|ZP_06850859.1| possible acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896104|gb|EFG75771.1| possible acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 401

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 31/264 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM----LAQVEGR--V 253
           + +TE   G+D AA+++   K+    Y ++G K ++++      I+    L + +GR  +
Sbjct: 131 MAITEPGFGSDSAAVSTTA-KLDGDEYVINGEKIYVTAGSRATHIVVWATLDKSKGRAAI 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310
             F+VPR        G+  +RL+ K+G + + T  + F N       LLG+  +  G   
Sbjct: 190 KSFIVPR-----EHPGVTVERLERKLGIKGSDTAAIRFDNVRIPRENLLGNPEIEEGKGF 244

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILI--DQP--VMKRAIAD---I 362
              ++   D+    V+ M + +  A +   R+     G+ I  D+P  V   A A+   +
Sbjct: 245 S-GVMETFDNTRPIVAAMAIGVGRAALEEIRKILTEAGVEISYDKPSHVQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ R A   D     S+EA+       ++K    +MA  V  +++E  G +
Sbjct: 304 EADWEAAYLLALRAAWQADNKIPNSKEAS-------MSKAKAGRMASDVTLKSVELAGTA 356

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GY E+  + +  R+S    I  G+
Sbjct: 357 GYSEQSMLEKWARDSKILDIFEGT 380


>gi|75907870|ref|YP_322166.1| Acyl-CoA dehydrogenase [Anabaena variabilis ATCC 29413]
 gi|75701595|gb|ABA21271.1| Acyl-CoA dehydrogenase [Anabaena variabilis ATCC 29413]
          Length = 602

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 22/248 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           M+  + A+ L  +EK  G+D+ A   +  K+  G Y L+G KW ++ + +S    +LA+ 
Sbjct: 116 MKDANGAMCLAYSEKAHGSDLLASDVRATKVPGG-YILNGEKWPINRATISGVTFVLAKT 174

Query: 250 EGRVGC-FLVPRLLEDGSPNGLCYQRLKNKI--GNRSNATVELEFSNTF-------GFLL 299
           +   G   L   ++E    +   Y  L      G R +    ++F N F       G   
Sbjct: 175 DEEGGARSLSLFMVEKSKIDPANYSHLPKIFTHGVRGSDMSGIKFENCFIPESMRLGAEG 234

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L ++    +  + L     A  S      +L   + +A  R + G  + D P  KR +
Sbjct: 235 AGLELALKGFQITRAL----CAAFSQGAADTALRTTLKFALGRQLYGKTVYDMPQPKRTL 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D  LDI      +  +A  F+    +        + + + KY+       V+      +
Sbjct: 291 TDGFLDILICDCATIGVARGFNTMPEQ------ISVWSAVVKYFVTTTLETVVQNVSVVL 344

Query: 420 GGSGYIEE 427
           G   Y+ E
Sbjct: 345 GSRFYMRE 352


>gi|159036184|ref|YP_001535437.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915019|gb|ABV96446.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 386

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 17/248 (6%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247
           P      AIG  GLTE   G+D A++ ++ ++  D  + L G K W  ++ ++D  ++ A
Sbjct: 120 PAMAHGEAIGCFGLTEPDHGSDPASMATRARRDGDD-WVLHGTKMWITNASVADVAVIWA 178

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  V  F VP         G+  + +++K+  R++ T E+   +        L  + G
Sbjct: 179 RTDEGVCGFAVPM-----DTPGVTVREIRHKMSLRASVTGEISLDDVRLPAAARLPEAVG 233

Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L      I+  ++   R  L  A+ YA  R   G  L    + +  +AD+A++
Sbjct: 234 LKAPLGCLTEARHGIVWGALGAARDCLETALDYATGRTQFGRPLAAFQLTQAKLADMAVE 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 L+  L    D  + R  + +       + K    + A A+  +    +G +G  
Sbjct: 294 WNKGYLLALHLGRLADARRLRPHQVS-------VGKLNNVREALAIARQCRTILGANGVS 346

Query: 426 EERSIARH 433
            +  + RH
Sbjct: 347 GDYPVMRH 354


>gi|147677908|ref|YP_001212123.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274005|dbj|BAF59754.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 508

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 103/236 (43%), Gaps = 24/236 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCF-- 256
           +G+TE   GTD + +  + ++  +  Y L+G K F+  + ++  + + A+   +      
Sbjct: 123 VGITEMTAGTDASGMELEARREGNA-YILNGKKRFIVGAGVAKRYFVYARTSNKPEDIAK 181

Query: 257 ---LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              L   ++E G+P G   +++   +G  +     L+F N    ++   N      E  +
Sbjct: 182 HRHLTAFIVEKGTP-GFTTEKINEILGFENVQNGSLDFDNV---IVPVENRIGEEGEGWR 237

Query: 314 IL---IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           +L   +  +  ++S S     R+ L  A+ Y++RR   G   ID P+ ++ IAD+ + + 
Sbjct: 238 VLMEGLNFERTLISASAAAWQRILLKYAVPYSQRRVQFGRPTIDIPINQQKIADLIMRLK 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                 +  A  +D  K  + E++  + +     +       A   +A + +GG G
Sbjct: 298 MTRMAVYYTAYLWDMGKDVTIESSMVKAIGAENTF-------ASACDATQIMGGDG 346


>gi|311894682|dbj|BAJ27090.1| putative acyl-CoA oxidase [Kitasatospora setae KM-6054]
          Length = 606

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 108/273 (39%), Gaps = 47/273 (17%)

Query: 203 TEKRGGTDIAAI--TSQGQKISDGIYCLSGH----KWFL-SSPMSD-------AFIMLAQ 248
           TE+  G D AA+  T++  +  DG    + H    K+   +SP          A +++  
Sbjct: 138 TERAHGNDAAALETTARYDRERDGFVLHTPHPGAAKYMPNTSPAGGPKSAVVAARLLVDD 197

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  V  FLVP   E G+  G+    L  +IG+  +  V   F       L    +  GP
Sbjct: 198 TDHGVFLFLVPLSDERGTRPGITVTALPERIGSPVDHCVT-AFDR---VRLPRTALLQGP 253

Query: 309 VEDMKILIYLDSAI--------------------MSVS---GMRVSLAEAIHYARRRHVS 345
              ++    LDSA+                    MS S   G R +LA A+ YA  RHVS
Sbjct: 254 HGRLRPDGTLDSAVGSPRKRFLHAIRRVTAGKLCMSASTLGGCRAALATAVRYAHLRHVS 313

Query: 346 G---GILIDQPVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYARIMAPIT 400
           G   G  +     +   A +   +AAA A++F  R A         +E  A  R++A + 
Sbjct: 314 GPVAGQRVPLAAHRSHHARLLACVAAAYAMTFLHRAATERWITHHPAERPAAERLVA-VA 372

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           K W    A  ++ E+ E  G  G      +A +
Sbjct: 373 KGWITWRARDIVTESRERCGARGLFPVNGLAEY 405


>gi|126434600|ref|YP_001070291.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126234400|gb|ABN97800.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 395

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 13/112 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML-------AQVEG 251
           LG TE  GG+D+A   ++  + +DG  + ++G K F S+  +  ++ L       A    
Sbjct: 125 LGYTEPEGGSDVATCKTRAVREADGSTWIINGSKMFTSNAHNAHYVFLITNTDPAAPKHK 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            +  FLVP      SP G+  Q L+   G+R+N T   +   +  + +GD+N
Sbjct: 185 SLTMFLVPL----DSP-GVEIQPLRTVDGDRTNITYYSDVRISDRYRVGDVN 231


>gi|226954073|ref|ZP_03824537.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835198|gb|EEH67581.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 399

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 12/98 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ ++G    
Sbjct: 130 MAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADSVVVWATLDKKLGRAAI 188

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             F+V +    G+P G+  +RL++K+G +++ T  + F
Sbjct: 189 KSFVVTK----GTP-GMKVERLEHKLGIKASDTAVISF 221


>gi|221067805|ref|ZP_03543910.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712828|gb|EED68196.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 380

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 30/269 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258
           L +TE  GG+D+AA+ ++ ++  D  Y + G K F++S M   +I +A   G   G   +
Sbjct: 122 LAITEPGGGSDVAALRTRARREGD-EYVIEGEKTFITSGMRADWITVAVRTGEERGACGI 180

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             +L  G   GL    L +K+G + + T  L F         LLG         E  + +
Sbjct: 181 SLILVPGDSAGLRRSPL-HKMGWQCSDTAHLFFEGVRVPASHLLGVEG------EGFRAI 233

Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++      L  A  ++   +    EA+ +A++R   G  L    V++  + D+   + + 
Sbjct: 234 MHNFNGERLGIACAALGFAQACYDEALAWAQQRQTFGVTLNQHQVIRHKLVDMQQRLRST 293

Query: 370 TALSFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A    +    D   S ++   E    +  A  T  +C          A++ +GG G++ 
Sbjct: 294 EAWINAVCAGADGGDSGADWVGEVCVLKNHATQTMQFCADT-------AVQILGGMGFMR 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455
                R YRE     + +G G   ++  L
Sbjct: 347 GTLSERIYRE--VKVLTIGGGTEEIMKEL 373


>gi|119196911|ref|XP_001249059.1| hypothetical protein CIMG_02830 [Coccidioides immitis RS]
          Length = 399

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 44/319 (13%)

Query: 140 LYLMAQLEAG----HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           L+ +AQ  AG      +  +V +   VA   T    +   PK+ + EY            
Sbjct: 74  LHTIAQSGAGLAGAQSIHANVYATQPVAKFATEEQRQQMLPKLIAGEYRTC--------- 124

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----- 249
                G+TE   G +   + +   +  D  Y +SG K W  S+ ++   ++LA+      
Sbjct: 125 ----FGVTEPNTGLETLKLRTTATRDGDH-YRVSGQKIWISSAQVAKKMVLLARTTPIEE 179

Query: 250 -----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                EG +  F +     D +  GL  +++K K+G RS    E+ F N   + +    +
Sbjct: 180 VKRPSEG-LSLFFIDF---DKNAPGLDLRKIK-KMGGRSVDANEVFFDN---YRVSADTL 231

Query: 305 STGPVEDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                E  KI+++    +  +++   +    V+L +A  YA+ R V G  +     +   
Sbjct: 232 IGKEGEGFKIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQGIAHP 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +A   +++ AA   ++  A  +D +K+ +S       +     K+   + A      A+ 
Sbjct: 292 LASAYMNLEAAKLATYHAARLYDASKTDKSISQHTVGVACNSAKFLAAEAAFTACERAVL 351

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY +E  + R+ RE
Sbjct: 352 AHGGMGYAQEFHVERYLRE 370


>gi|297162301|gb|ADI12013.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 408

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   R +   A+ YA+ R   G  +ID   +   +AD+   I AA  L +R   S+   
Sbjct: 274 AVGVARAAYEVALEYAKNRVQFGRPIIDNQGIAFQLADMRTRIDAARLLVWRA--SWMAT 331

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R   AA       ++K +  + A  V A+A++ +GG+G+  E  + R +R++   +I 
Sbjct: 332 AGRPFTAAEGS----MSKLFAGETAKTVTAQAVQILGGNGFTREYPVERMHRDAAIFTIF 387

Query: 444 LGS 446
            G+
Sbjct: 388 EGT 390


>gi|23500532|ref|NP_699972.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161620858|ref|YP_001594744.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|254703134|ref|ZP_05164962.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|260567937|ref|ZP_05838406.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261753754|ref|ZP_05997463.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|23464165|gb|AAN33977.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161337669|gb|ABX63973.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260154602|gb|EEW89683.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261743507|gb|EEY31433.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|320335659|ref|YP_004172370.1| glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756948|gb|ADV68705.1| Glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 386

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCF 256
            GLTE  GG+D  A+ ++ ++  DG  Y L+G K W  +SP++D  ++ A+  +G V  F
Sbjct: 130 FGLTEADGGSDPGAMRTRARR--DGQHYVLNGTKMWITNSPLADVALVWAKDDDGHVRGF 187

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           LV R        GL    ++ K+  R++ T E+   +
Sbjct: 188 LVDR-----DTPGLHTPTIERKMSLRASTTGEVVLDD 219


>gi|304404759|ref|ZP_07386420.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346566|gb|EFM12399.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 377

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 15/255 (5%)

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GT+ A++T+   +  D I     H   L +  +D +++ A +       +   LL +   
Sbjct: 135 GTNGASVTAD--EAGDWIRLNGSHPVMLHAGYADTYVICAPMARNRQWNM---LLINDQE 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL  +    K+G  +    E  F N        +G        V  M  L  L +A ++
Sbjct: 190 AGLTLKPTVQKLGLHAVPVAEALFQNCTIPREQRIGRFGSGAKAVSTMLQLGQLSAAAIA 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L EA  YA+ R   G  +  Q  +   +AD+++   A+  L ++ A   D   
Sbjct: 250 VGIAQGALDEATAYAKTRKQFGVAIGRQQGILFKLADMSVRTEASRLLIYQAAWQLDAGL 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S   A AR        +  + A AV  EA++  GG GY+ E  + R+ R++       
Sbjct: 310 DSSRACAIAR-------RYAARTAVAVATEAVQVFGGYGYMREYRVERYMRDAKGIDSDF 362

Query: 445 GSGNAMVLDVLNLLE 459
             G  +V + L +L+
Sbjct: 363 MLGGMIVEEELRILQ 377


>gi|158520221|ref|YP_001528091.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509047|gb|ABW66014.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 370

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           MR SL EA+ Y R R   G  + D   ++  ++ +A+ +  A  L  R        ++ S
Sbjct: 245 MRGSLEEALAYCRERRQGGRKIKDWSELQMLLSSMAVQVHVAEMLVSR------ACRALS 298

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           E+A   R+               V+ + ++ +GG GY+++    + +R++     LLG
Sbjct: 299 EDAKNWRLSVQAAALHVISALAPVVTDGIQAMGGVGYMKDFGQEKRFRDAGHIQTLLG 356


>gi|319793839|ref|YP_004155479.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315596302|gb|ADU37368.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 618

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 144/356 (40%), Gaps = 85/356 (23%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI----------YCLSGHKWFLSSPMSD-----AFIML 246
           L+E + G+ ++ + ++   + DG           Y L+G+K ++SS   +       I+L
Sbjct: 159 LSEPQAGSSLSDVATRA--VPDGADYQDDPLGPRYRLTGNKMWISSGDHELTENIVHIVL 216

Query: 247 AQVEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290
           A++    G           F+VP+ + +      G  N +    L +K+G R      L 
Sbjct: 217 AKIPDENGKLVPGTRGISLFIVPKRMVNTKGELTGERNDVALAGLNHKLGWRGTTNTLLN 276

Query: 291 F----------SNTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           F          +   G+L+G     L+     + + +I +   + ++ ++G   SL    
Sbjct: 277 FGEGKYPVDGKAGAVGYLVGAPGKGLHCMFHMMNEARIGVGTAATMLGMAGYYASL---- 332

Query: 337 HYARRRHVSGGILIDQP-------VMKRAI---------ADIALDIAA-------ATALS 373
            YA+ R    G L+ +P       V+K +          AD+   + A       A AL 
Sbjct: 333 EYAKSR--PQGRLVKKPEAGAGSQVVKDSASPQVRIIEHADVRRMLLAQKAYCEGALALE 390

Query: 374 FRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              A   D  K+ + +AA        ++ PI K W  +      + A++  GG GY  + 
Sbjct: 391 LYCARLVDTQKTGAAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDF 450

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGK 481
            + +++R++  N I  G+      D+L    L+EKG  L + L   + + +G + K
Sbjct: 451 PVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEKGRGL-QLLAGRITETIGRTAK 505


>gi|148558732|ref|YP_001257744.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148370017|gb|ABQ62889.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 386

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 121 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 179

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 180 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 236

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 237 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 286 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 335

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 336 CVQTHGGFGFAEEYDVERKFRET 358


>gi|89901161|ref|YP_523632.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345898|gb|ABD70101.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 618

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 368 AATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            A AL    A   DE  S + EAA        ++ PI K W  +      + A++  GG 
Sbjct: 385 GALALELYCARLVDEQHSGTPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGY 444

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           GY  +  + +++R++  N I  G+     +D+L    L+E G  L
Sbjct: 445 GYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVLMESGRGL 489


>gi|41408936|ref|NP_961772.1| FadE20_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397295|gb|AAS05155.1| FadE20_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 399

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 32/225 (14%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----- 294
           SD  I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++      
Sbjct: 183 SDLVIVVAQTDPDKGAQGFSLLVVERGMEGFERGRHLDKIGLDAQDTAELSFTDVHVPAE 242

Query: 295 ---------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                    F +L+ +L     P E + I      A+M+ + M   L + + Y + R   
Sbjct: 243 NLLGQEGMGFIYLMQNL-----PQERISI------AVMAAAAMEQVLEQTLEYTKERKAF 291

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +      +  +A++A +      +         + K  +E+AA A       K++  
Sbjct: 292 GKSIGSFQNSRFVLAELATEATVVRMMVDEFVRLHLDHKLTAEQAAMA-------KWYST 344

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +    +I   ++  GG GY+ E  +AR Y ++   +I  G+   M
Sbjct: 345 EKQVHLIDRCLQLHGGYGYMREYPVARAYLDARVQTIYGGTTEIM 389


>gi|325964229|ref|YP_004242135.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470316|gb|ADX74001.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 401

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 29/307 (9%)

Query: 136 RAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
           R+A  Y +A  +LEAG     +  S      MT   +H  W  +   +E+ P     M  
Sbjct: 83  RSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTA--IHT-WGSEDQKQEWLPR----MAA 135

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHK-WFLSSPMSDAFIMLAQV 249
             +     LTE   G+D +A+ +   +   G    + L+G K W   + ++   ++ A  
Sbjct: 136 GEIIGCFALTEPTAGSDPSAMATLAWRDGPGEEAGWVLNGTKRWIGLASVAGVMVVWAAT 195

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVST 306
           +  V  FLVP     G+P G+    +  K+  R++   ++ F +   G   LL       
Sbjct: 196 DDGVHGFLVPA----GTP-GVTAVPIPQKLSMRASIQCDVVFDDVRLGPEALLPAARGLR 250

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP   +    Y   A  ++   R S   A+ Y++ R   G  L    + +  + ++ L+I
Sbjct: 251 GPFTCLNEARY-GIAWGAMGAARDSYEAALAYSQERLQFGKPLAGYQLTQEKLVNMLLEI 309

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              T L+  L    D  K R E+ +  ++          + A A+  EA   +GG+G   
Sbjct: 310 QKGTLLALHLGRLKDAGKLRPEQISLGKLN-------NVREALAIAREARSILGGNGITL 362

Query: 427 ERSIARH 433
           + S  RH
Sbjct: 363 DYSPLRH 369


>gi|313219763|emb|CBY30681.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 24/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251
           L ++E   G+D+ ++  Q  K      Y ++G K W  + P+ D  ++ A+ +       
Sbjct: 153 LAMSEPGSGSDVMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSK 212

Query: 252 RVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPV 309
            +  F +  R LE     G     +  K+G R + T EL F N        L V   G  
Sbjct: 213 SITAFAIDVRELE-----GFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGVEGKGAA 267

Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MK L    L  A  +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++
Sbjct: 268 VLMKGLNVERLTGAAGAVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLS 327

Query: 368 AATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  A  + L  + D + K+ +     A +M      +  + A  V  EA++ +GG+GY  
Sbjct: 328 ATRAYLYALLKAADKDQKTLTNHDCAAVLM------YGAEQATKVSLEAIQILGGNGYTN 381

Query: 427 ERSIARHYRESPANSILLGS 446
                R  R+     I  G+
Sbjct: 382 AYPAERIMRDCKIGEIGAGT 401


>gi|215402674|ref|ZP_03414855.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
 gi|289744603|ref|ZP_06503981.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
 gi|289685131|gb|EFD52619.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
          Length = 282

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 23/254 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 36  LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 95

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 96  SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 147

Query: 314 I-LIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I L  L++  +S+  +   +A +A+  AR   V   +   +PV +     +A  I+   A
Sbjct: 148 IALTTLNAGRLSLPAIATGVAKQALKIAREWSVER-VQWGKPVGQHEA--VASKISFIAA 204

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+
Sbjct: 205 TNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESL 264

Query: 431 -ARHYRESPANSIL 443
            AR  R  P   ++
Sbjct: 265 AARGERAVPVEQMV 278


>gi|17988837|ref|NP_541470.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990095|ref|ZP_06102652.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265992795|ref|ZP_06105352.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|17984659|gb|AAL53734.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763665|gb|EEZ09697.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|263000764|gb|EEZ13454.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 395

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 130 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 188

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 189 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 245

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 246 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 294

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 295 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 344

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 345 CVQTHGGFGFAEEYDVERKFRET 367


>gi|209963869|ref|YP_002296784.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209957335|gb|ACI97971.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 381

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 27/271 (9%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ +  + + L   E++   D+  I +  Q+   G Y L G K   L++P +D  I+ A+
Sbjct: 113 PLLEGRLQLALAYAERQARYDLFDIATTAQRQEGGGYVLDGRKSVVLNAPSADWLIVAAR 172

Query: 249 VEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             G    R G  L    L D +  GL  +      G R+        S     LLG    
Sbjct: 173 TAGGRRDRDGISL---FLVDRAAPGLDLRDYPTLDGQRAAEVTLTGVSVPTDALLGPEGG 229

Query: 305 STGPVE---DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +   +E   D  I      A+  +  +   +   + Y R R   G  +    V+K  +AD
Sbjct: 230 ALSAIEAATDRAIAALCAEAVGCIDHL---VTATVEYTRTRVQFGQPIARFQVLKHRMAD 286

Query: 362 IALDIAAATALSFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +A+ +  A +++   A  +D A    + R+  AA A++          + A  V  +A++
Sbjct: 287 MAVCLEQARSMAAYAARHWDTADATVRGRAMSAAKAKV---------GQAARFVAQQAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448
             G  G  EE ++  + +   A  +  GS +
Sbjct: 338 LHGAMGVTEELNVGHYMKRLMAIEVAFGSTD 368


>gi|289751377|ref|ZP_06510755.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T92]
 gi|289691964|gb|EFD59393.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T92]
          Length = 214

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 32/221 (14%)

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------- 294
           I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++          
Sbjct: 2   IVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLG 61

Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                F +L+ +L     P E + I      AIM+ +GM   L + + YA+ R   G  +
Sbjct: 62  QEGMGFIYLMQNL-----PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSI 110

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +A++A +      +           K  +E+AA A       K++  +   
Sbjct: 111 GSFQNSRFLLAELATEATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQV 163

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +    ++  GG GY+ E  +AR Y +S   +I  G+   M
Sbjct: 164 YLNDRCLQLHGGYGYMREYPVARAYLDSRVQTIYGGTTEIM 204


>gi|262201749|ref|YP_003272957.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262085096|gb|ACY21064.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 407

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 24/269 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D         K     Y L G K F+++ P +D  ++ A+++      +  R
Sbjct: 140 ITEPDSGSDALGGMKTTVKRDGDDYILKGQKTFITNGPYADTIVVFAKLDDGSDTPMRDR 199

Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGF--LLG---DLNVSTGPV 309
                +L+ G P GL   +   K+G  S+ T EL F N   G   LLG   D        
Sbjct: 200 KVLSFVLDKGMP-GLTQGKAFKKMGMMSSPTGELFFDNVRLGRDRLLGETEDTGSDARGS 258

Query: 310 EDMKILIYLDS---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           E  K     +    A +S+  +   L  ++ YA+ R + G     Q + +  +  I L +
Sbjct: 259 EGAKAGFTAERVGIAALSLGIINECLRLSLDYAKNRKLWG-----QEIAQFQL--IQLKL 311

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYI 425
           A        + N    A  R++      +  A   K +  K A  V  EA++  GG+GY+
Sbjct: 312 AEMEVARINVQNMLFSAIERAQAGKPLSLSEASAMKLYSSKAATDVAMEAVQLFGGNGYM 371

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454
            E  + +  R++ +  I  GS    V  V
Sbjct: 372 AEYRVEQLARDAKSLMIYAGSNEIQVTHV 400


>gi|221103794|ref|XP_002157430.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase [Hydra
           magnipapillata]
          Length = 179

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 22/174 (12%)

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH 337
           R + T EL F N       +LG+LN      + + +L   LD   + +SG  + + +A+ 
Sbjct: 2   RGSNTCELVFDNCRVPAENILGELN------QGVYVLFSGLDIERLVLSGGPLGIMQAVS 55

Query: 338 -----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y   R   G  +    +M+  +ADI + ++A+ +  + +A + D     S++ A 
Sbjct: 56  DTVFPYVHARKQFGESVGHFQLMQAKLADIYVALSASRSYVYSVARAIDSGHFNSKDCAG 115

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             + A        + A  V  + ++C+GG+GYI +    R  R++    I  G+
Sbjct: 116 VILYAS-------EKATQVALQGIQCLGGNGYINDYPTGRFLRDAKLYEIGAGT 162


>gi|326410953|gb|ADZ68017.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554244|gb|ADZ88883.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 386

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 121 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 179

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 180 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 236

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 237 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 286 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 335

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 336 CVQTHGGFGFAEEYDVERKFRET 358


>gi|154251819|ref|YP_001412643.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155769|gb|ABS62986.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 395

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 20/271 (7%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
           GL+E   G D+A + +  ++  D +      +W   + ++D    L +   +      + 
Sbjct: 134 GLSEPNVGGDLATVETTARREGDELVINGTKRWCTGAHIADYIFCLLRTGPKEDKYKNLS 193

Query: 255 CFLVPRLLEDGSPNGLCYQRLKN-KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             LVP  L   S   L +  ++  +  + S   V +  SN  G   G    + G  +   
Sbjct: 194 IVLVPPTLPGISITPLGHLGIRGVETKDVSFDDVRVPVSNILG---GQAMWNKGWSQLAG 250

Query: 314 ILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             + ++   +S   + +S   LA+A  YA  R   G  +     ++  +A+    + A  
Sbjct: 251 RALEVEKLELSACALGLSEAALADAWRYAEERTQFGRAIAGHQAIRHTLAEAQTHVRAMR 310

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +  A   D  +  S E + A       K +CC+ A  V    M   G  G  ++  +
Sbjct: 311 LMLYSAAWLADRGRPCSVETSMA-------KLFCCEGAAEVTQMCMRVTGAYGLSDQMDM 363

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R+ R++ +  I+ GS N    ++ N L+ G
Sbjct: 364 ERYVRDAVSLPIVGGSSNMQKNNIANRLKLG 394


>gi|215402673|ref|ZP_03414854.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
 gi|289744602|ref|ZP_06503980.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
 gi|289685130|gb|EFD52618.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis 02_1987]
          Length = 559

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 32/272 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           I L  L++  +S+  +   +A +A+  AR   V   +   +PV +     +A  I+   A
Sbjct: 282 IALTTLNAGRLSLPAIATGVAKQALKIAREWSVER-VQWGKPVGQHEA--VASKISFIAA 338

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+
Sbjct: 339 TNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESL 398

Query: 431 -ARHYRESPA---------NSILLGSGNAMVL 452
            AR  R  P          N I  GS   M L
Sbjct: 399 AARGERAVPVEQMVRDLRINRIFEGSSEIMRL 430


>gi|169629481|ref|YP_001703130.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169241448|emb|CAM62476.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 428

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 36/249 (14%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPR------LLEDGSPNGLCYQRLKN 277
           Y L+G K F+++ P +D  ++ A++ EG     + PR       + D    G    +   
Sbjct: 180 YILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFR 239

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  S+ T +L F N       LLG+    T    D +     DSA  + S  R+ +A 
Sbjct: 240 KMGIHSSRTGQLFFENVRLGKDRLLGE--TETNDQGDGR-----DSARANFSMERIGVAA 292

Query: 335 ------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                       ++ YA+ R + G  +    +++  +A + +       + F    S  E
Sbjct: 293 LALGVIEECLRLSLDYAKSRTLWGKEIAQFQLIQLKLAKMEVARLNVRNMLFHAIESLSE 352

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+ S   A A       K +C + A  V  +A++  GG+GY+ E  + +  R++ +  I
Sbjct: 353 NKTPSLAEASA------IKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMI 406

Query: 443 LLGSGNAMV 451
             GS    +
Sbjct: 407 YAGSNEVQI 415


>gi|94967641|ref|YP_589689.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549691|gb|ABF39615.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 392

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 42/252 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255
            GLTE   G++ +A+ ++ +K  +  Y +SG K W  S  ++D  ++ A+VE   GRV  
Sbjct: 134 FGLTEPDAGSNPSAMRTRARKEGND-YIISGEKMWITSGSIADVAVIWAKVEDEGGRVRG 192

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KI 314
           FLV    E   P G   + +  K   R++ T  L         L D+ +   P E++   
Sbjct: 193 FLV----ETDRP-GFVAKDVHGKWSLRASVTSSLS--------LQDVRI---PAENLLPK 236

Query: 315 LIYLDSAIMSVSGMRVSLAE------------AIHYAR-RRHVSGGILIDQPVMKRAIAD 361
              L S +M ++  R  +A             A+ YA+ R+      +    +++  +  
Sbjct: 237 SDGLKSPLMCLNQARYGIAWGAIGAAMACYDCALQYAQFRKQFHDMPIAGHQLVQEKLVW 296

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I  A  L+ ++    D+ K+  +  + A+         C +MA        + +GG
Sbjct: 297 MITEITKAQLLALQVGRLKDQGKAGHQHISMAKRNNVWMALECARMA-------RDILGG 349

Query: 422 SGYIEERSIARH 433
           +G  +E  + RH
Sbjct: 350 NGIADEYPVFRH 361


>gi|303322106|ref|XP_003071046.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110745|gb|EER28901.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032744|gb|EFW14695.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 447

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 44/319 (13%)

Query: 140 LYLMAQLEAG----HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           L+ +AQ  AG      +  +V +   VA   T    +   PK+ + EY            
Sbjct: 122 LHTIAQSGAGLAGAQSIHANVYATQPVAKFATEEQRQQMLPKLIAGEYRTC--------- 172

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----- 249
                G+TE   G +   + +   +  D  Y +SG K W  S+ ++   ++LA+      
Sbjct: 173 ----FGVTEPNTGLETLKLRTTATRDGDH-YRVSGQKIWISSAQVAKKMVLLARTTPIEE 227

Query: 250 -----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                EG +  F +     D +  GL  +++K K+G RS    E+ F N   + +    +
Sbjct: 228 VKRPSEG-LSLFFIDF---DKNAPGLDLRKIK-KMGGRSVDANEVFFDN---YRVSADTL 279

Query: 305 STGPVEDMKILIY-LDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                E  KI+++ +++    ++G       V+L +A  YA+ R V G  +     +   
Sbjct: 280 IGKEGEGFKIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQGIAHP 339

Query: 359 IADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           +A   +++ AA   ++  A  +D +K+ +S       +     K+   + A      A+ 
Sbjct: 340 LASAYMNLEAAKLATYHAARLYDASKTDKSISQHTVGVACNSAKFLAAEAAFTACERAVL 399

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY +E  + R+ RE
Sbjct: 400 AHGGMGYAQEFHVERYLRE 418


>gi|225686566|ref|YP_002734538.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256043674|ref|ZP_05446599.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111283|ref|ZP_05452314.1| acyl-COA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256262297|ref|ZP_05464829.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564864|ref|ZP_05835349.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225642671|gb|ACO02584.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|260152507|gb|EEW87600.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263092024|gb|EEZ16321.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|288961118|ref|YP_003451457.1| hypothetical protein AZL_b02500 [Azospirillum sp. B510]
 gi|288913426|dbj|BAI74913.1| hypothetical protein AZL_b02500 [Azospirillum sp. B510]
          Length = 401

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 39/253 (15%)

Query: 217 QGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR---LLEDGSPNGLCY 272
            G KI S GI  LS   W      +D      + E R+G ++VPR   L E     G+  
Sbjct: 164 SGAKIYSTGIPALS---WLGVWARTD------EAEPRIGTWVVPRGTGLAE----QGIEV 210

Query: 273 QRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTG-PVEDMKILIYLDSAIMSV---- 325
           +   N IG R++ + E+ F++ F     +G+L    G  V D     ++ +    V    
Sbjct: 211 RETWNHIGMRASGSHEVVFNDVFVPDDHVGELRPPAGWAVPDAAATAWMATLFSGVYDGV 270

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               R  L   +H  +   ++G  L   P ++ A+  I   +     L   L+ + D   
Sbjct: 271 ARAARDWLVGFLHARKPTGLNGASLATVPRLQEALGGIEALLLTNRLLLRSLSAAVDGGA 330

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE-------S 437
             S   +       + KY     A   +A A+E  G  G   +  + RH+R+       +
Sbjct: 331 PPSSSDSL------LVKYTVTNNAIDAVARALEITGNPGLSRDNPLERHHRDVLCARVHA 384

Query: 438 PANS-ILLGSGNA 449
           P N  IL G+G A
Sbjct: 385 PQNDMILTGAGRA 397


>gi|254700013|ref|ZP_05161841.1| acyl-CoA dehydrogenase family protein [Brucella suis bv. 5 str.
           513]
 gi|254705721|ref|ZP_05167549.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254710954|ref|ZP_05172765.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           B2/94]
 gi|254712573|ref|ZP_05174384.1| acyl-CoA dehydrogenase family protein [Brucella ceti M644/93/1]
 gi|254715646|ref|ZP_05177457.1| acyl-CoA dehydrogenase family protein [Brucella ceti M13/05/1]
 gi|256015564|ref|YP_003105573.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029336|ref|ZP_05442950.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256157529|ref|ZP_05455447.1| acyl-CoA dehydrogenase family protein [Brucella ceti M490/95/1]
 gi|256253496|ref|ZP_05459032.1| acyl-CoA dehydrogenase family protein [Brucella ceti B1/94]
 gi|260167574|ref|ZP_05754385.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|261217395|ref|ZP_05931676.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261313141|ref|ZP_05952338.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318534|ref|ZP_05957731.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261320268|ref|ZP_05959465.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|261750496|ref|ZP_05994205.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261756996|ref|ZP_06000705.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|255998224|gb|ACU49911.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260922484|gb|EEX89052.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261292958|gb|EEX96454.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|261297757|gb|EEY01254.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261302167|gb|EEY05664.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736980|gb|EEY24976.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740249|gb|EEY28175.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|237816918|ref|ZP_04595910.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260756446|ref|ZP_05868794.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260759878|ref|ZP_05872226.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260763116|ref|ZP_05875448.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882268|ref|ZP_05893882.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|261216245|ref|ZP_05930526.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|237787731|gb|EEP61947.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260670196|gb|EEX57136.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260673537|gb|EEX60358.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676554|gb|EEX63375.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260871796|gb|EEX78865.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260917852|gb|EEX84713.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 395

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+     +G   
Sbjct: 130 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 188

Query: 255 CFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
              +  L+ D      NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 189 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPISNLIGEEGKGFRY 245

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 246 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 294

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 295 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 344

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 345 CVQTHGGFGFAEEYDVERKFRET 367


>gi|119474768|ref|ZP_01615121.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119450971|gb|EAW32204.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 380

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARI 395
           HY +R H +G  L D+  ++   AD+ ++   A +  +R A   D  A S +E  A    
Sbjct: 258 HYLQRPHRTGTPLADKEGVRLRYADMRIETYIARSALYRTARLVDSGANSVNETIA---- 313

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               TK +C + A  VI   ++ +GG   ++   + + YRE  +  +  G+ + + L++
Sbjct: 314 ----TKVFCTEAAGRVIDWGVQLVGGQALVQGHPLEKLYREVRSLRLTEGASDLLRLNL 368


>gi|161614882|ref|YP_001588847.1| hypothetical protein SPAB_02636 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168240735|ref|ZP_02665667.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168466472|ref|ZP_02700334.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194450401|ref|YP_002044888.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|200389551|ref|ZP_03216162.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|161364246|gb|ABX68014.1| hypothetical protein SPAB_02636 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408705|gb|ACF68924.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630965|gb|EDX49551.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|199601996|gb|EDZ00542.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205339841|gb|EDZ26605.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 387

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 68/292 (23%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W P+I + E+   +            +G+TE   GTD   I +   K  D  Y ++G K 
Sbjct: 108 WLPRIATGEWRLQS------------MGVTEPTAGTDTTRIKTTAIKREDR-YVINGQKV 154

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           W      SD  I+L +           EG +  F+V   +++   NG+  + + N + + 
Sbjct: 155 WISRVQHSDWMILLVRTTPLANVKRKSEG-MSIFMVD--IKEAMKNGMTVRPIPNMVNHE 211

Query: 283 SNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +N   EL F N               F ++L  LN         + LI    A   +   
Sbjct: 212 TN---ELFFDNLEIPEENLIGEEGMGFHYILDGLNAE-------RTLI----AAECIGDG 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     Y   R V G  +     ++  IA+  + + AA  + F+    FD+      
Sbjct: 258 YWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGA 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRES 437
           +A  A+ +A          A A    A  C+   GG G+  E  I R +RE+
Sbjct: 318 QANMAKYLA----------AKASWEAANACLQFHGGYGFACEYDIERKFRET 359


>gi|65319845|ref|ZP_00392804.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
          Length = 119

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   +EAA A++
Sbjct: 1   MQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKL 60

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A        + A  +  +A++  GG GY+ E  + RH R+  A  + +G G + +
Sbjct: 61  FAS-------EAASRIANQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 107


>gi|311743568|ref|ZP_07717374.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312698|gb|EFQ82609.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 387

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 23/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D A   ++  +  D  + L+G K W  ++  S+ + +LAQ +       +  
Sbjct: 126 LSEPDAGSDAANQKTRAVRDGDD-WVLNGVKRWITNAGESEYYTVLAQTDPEKRTKGITA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIY 317
            + + S  G+ +   + K+G + + T E+   +    + GD     V  G    M+ L  
Sbjct: 185 FVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDHVR--IPGDRIIGEVGQGFALAMQTL-- 240

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            D   ++++   V +A+     A+ Y + R   G  + +   ++  +AD+ + I AA  L
Sbjct: 241 -DHTRVTIAAQAVGVAQGALDHALGYVQERRQFGKAIAEFQGIEFMLADMGMKIEAARQL 299

Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++        A  RSE   A         K +   +A  V  +A++ +GG GY  +  + 
Sbjct: 300 TY-------AAAGRSERGDADLTFFGAAAKAFASDVAMQVTVDAVQLLGGYGYTRDYPVE 352

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  G+
Sbjct: 353 RMMRDAKITQIYEGT 367


>gi|311748665|ref|ZP_07722450.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
 gi|126577195|gb|EAZ81443.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
          Length = 452

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 39/265 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           MQK       GLTE   G+ +A   +   K     + L+G K W  ++  SD  I+ A+ 
Sbjct: 185 MQKLEKIGAFGLTEPEVGSGVAGGLTTTCKREGDTWILNGQKKWIGNATFSDLTIIWARD 244

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS--NATV-----------ELEFSNT 294
             + +V  F+V +     +P G   ++L++K+  R+  NA +            L+ +N+
Sbjct: 245 LDDQQVKGFIVRK----DNP-GFKAEKLEDKMALRTVQNALITLTKCEVPESDRLQEANS 299

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F      L ++   V           A  +V   R +   A+ Y   R   G  +    +
Sbjct: 300 FRDTAKVLRMTRAGV-----------AWQAVGCARGAYELALAYTNERKQFGRPIASFQL 348

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  +  D+ A   + FRL+   D    + E A+ A++       +C     +++  
Sbjct: 349 VQDILVTMLGDLTAMQTMVFRLSEMQDGDILKDEHASLAKV-------FCTLRMRSIVDH 401

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E  GG+G + +  IAR   ++ A
Sbjct: 402 ARELFGGNGILLKHDIARFVADAEA 426


>gi|194015538|ref|ZP_03054154.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194012942|gb|EDW22508.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 593

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+++G     F+V
Sbjct: 149 LTEPGSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIV 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
               E   P G+     + K+G + ++T  L   +       LLG+     G V    IL
Sbjct: 209 ----EKDFP-GVKTGPEEKKMGIKGSSTRTLILEDAQVPKENLLGE--AGRGHVIAFNIL 261

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A+ +V   +  +  +  YA +R      +    ++   +A+++  + A  +  
Sbjct: 262 NIGRYKLAVGTVGASKRVIQLSAEYANQRKQFQTPISRFSLIGEKVANMSAKLYAMESAV 321

Query: 374 FRLANSFDEAK---SRSEEAAYARIMAPITKYWC-CKMAPAVIAEAMECI--------GG 421
           +R    F++     S  E+    +I   I +Y   C +   + +E ++ I        GG
Sbjct: 322 YRTVGLFEQRMGLLSEEEQKDGKQIAQSIAEYAIECSLCKVLGSETLDYIADEGVQIHGG 381

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+++E  + R YR+S  N I  G+
Sbjct: 382 YGFMQEYEVERAYRDSRINRIFEGT 406


>gi|94310662|ref|YP_583872.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354514|gb|ABF08603.1| Acyl-CoA dehydrogenase, long-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 36/327 (11%)

Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           Y +A  EA GH  +  V     V   M TP +   +      RE+     AP     + +
Sbjct: 67  YAVAAAEALGHARAQGVGMGIGVQTDMATPALAA-FGTDALKREF----LAPAIAGEMVV 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGR 252
            +G++E   G+D+A++ ++ ++  D  Y +SG K W  +   +D   +L       V   
Sbjct: 122 SIGVSEVGAGSDVASLKTRARRDGDD-YVISGSKMWITNGTQADWICLLCNTSDGPVHKN 180

Query: 253 VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
               +VP L E+G    G+  Q+++ K+G   + T ++ F +        +GD  +  G 
Sbjct: 181 KSLIIVP-LRENGRLVRGVEVQKIR-KMGMWCSDTAQIFFDDVRVPARNRIGDEGM--GF 236

Query: 309 VEDMKILIYLDSAIMSVSGMRVS----LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +  MK         ++ +  R++    + E   Y R+R   G  L+D   ++  +A++  
Sbjct: 237 IYQMK---QFQEERLNGAARRLACSALIEETADYLRQRVAFGKPLLDNQYIQFKLAELKT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ +  AL      ++ + +   E A+ A++ A        +++  +    ++  GG GY
Sbjct: 294 ELESLRALVHVATRAYIQGEDVVELASMAKLKAG-------RLSREIADWCIQFQGGMGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
             +    R YR+    SI  G+   M+
Sbjct: 347 TWDNHANRAYRDFRLGSIGGGADEVML 373


>gi|296393370|ref|YP_003658254.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296180517|gb|ADG97423.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 381

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 14/256 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +   +  D  + L+G K F+++ + +D  I++AQ E   G   +
Sbjct: 125 IAMTEPGTGSDLQGIQTNAVRKGDD-WLLNGAKTFITNGVNADLVIVVAQTEPGSGAKGL 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
                +    G    R  +KIG R+  T EL F +       +LG++  +   +      
Sbjct: 184 TLFAVERGMAGFERGRKLDKIGLRAQDTAELVFQDVVVPQENVLGEVGQAFAYLMQNLAQ 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ +   + +S+   + Y + R   G     +P+ K       L   +A A + R
Sbjct: 244 ERLSIAVAAAITIELSIEMTVEYVKNRKAFG-----KPIGKFQNTRFVLAELSAEAAAVR 298

Query: 376 -LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L +   E   R E +      A I K +  +    V+   ++  GG GY+ E  IA+ Y
Sbjct: 299 ALVDRSIEFHLRGELSIPD---AAIAKLYSTERQVHVVDRCLQLHGGYGYMLEYPIAQAY 355

Query: 435 RESPANSILLGSGNAM 450
            +S   +I  G+   M
Sbjct: 356 VDSRIQTIYGGTSEVM 371


>gi|254457521|ref|ZP_05070949.1| putative acyl-coa dehydrogenase [Campylobacterales bacterium GD 1]
 gi|207086313|gb|EDZ63597.1| putative acyl-coa dehydrogenase [Campylobacterales bacterium GD 1]
          Length = 375

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 27/265 (10%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           + K  + + L  +E   GT       +  K  D  Y L+G K F+++    + +++L+  
Sbjct: 105 IAKGEITLALAYSETGTGTHFYQPEIELSKSGDS-YILNGRKSFVTAAGFVNYYLVLSST 163

Query: 250 EGRVGC--FLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGFLLGD---LN 303
             + G   +LVP   E     G+ ++    + +G R N ++ +  ++     LG+   + 
Sbjct: 164 LNKDGLDNWLVPHTNE-----GVSFEENGWDGLGMRGNVSMPMNLNDV---RLGEDSRIG 215

Query: 304 VSTGPVEDMKILI--YLDSAIMSVS-GMRVSLAEAI--HYARRRHVSGGILIDQPVMKRA 358
           V    +E +  ++  +  + + SVS G+ ++  E +  H  +R++ +G  L   P ++  
Sbjct: 216 VEGSGLEQVFSVVAPFFITGLASVSAGISLNACEVVTNHAMQRKYTNGDSLSLLPTVQND 275

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A I L   +A   +   ANS   AK+     A  +I+A   +    ++A  V   AM+ 
Sbjct: 276 LAKIYLKAQSAKHFTMAAANSGASAKAD----ALTQIIA--ARINASELAIEVCTIAMKI 329

Query: 419 IGGSGYIEERSIARHYRESPANSIL 443
            GG+ Y +   I R  R+S A+ I+
Sbjct: 330 GGGTAYAKRLPIERLLRDSLASQIM 354


>gi|167842244|ref|ZP_02468928.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 386

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 56/266 (21%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   +  D  Y ++G K W      SD  I+LA+          
Sbjct: 121 MGVTEPTAGTDTTKIKTTAVRRGDR-YVVNGQKVWISRVQHSDLMILLARTTPLSDVTKK 179

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  FLV   L D   +G+  + + N + + +N   EL F N               
Sbjct: 180 SEG-MSIFLVD--LHDAIGHGMTVRPIPNMVNHETN---ELFFDNLEIPAENLIGEEGQG 233

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   Y + R V G  +     
Sbjct: 234 FKYILDGLNAE-------RALI----AAECIGDGYWFIDKVSRYVQERVVFGRPIGQNQG 282

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA   +++ AA+ + +R    FD  +    +A  A+++A          A A    
Sbjct: 283 VQFPIARAYVNVEAASLMRYRACALFDAQEPCGAQANMAKLLA----------ADASWEA 332

Query: 415 AMECI---GGSGYIEERSIARHYRES 437
           A  C+   GG G+  E  + R +RE+
Sbjct: 333 ANACLQFHGGFGFACEYDVERKFRET 358


>gi|153007114|ref|YP_001381439.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152030687|gb|ABS28455.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 579

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 34/266 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           LTE   G+D A+I +   +  D  + L+G K W  +  ++D F + A+      G +  F
Sbjct: 151 LTEPGAGSDAASIKTTAVRDGDD-WVLNGEKLWITNGGIADFFTVFARTSLDGRGNITAF 209

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309
           +V R L+     G+     ++K+G R+++T       V +  +N  G       V  G  
Sbjct: 210 IVTRDLK-----GVSTGPHEDKMGIRASSTTTVVLEDVRVPAANVLG------EVGKGFK 258

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MKIL          SV GM+  +  ++  AR R   G  +     +++ I  + +D  
Sbjct: 259 LAMKILNAGRTGLGGGSVGGMKRLIELSVRQARERVQFGQPIASFESIQQKIGQMVVDCY 318

Query: 368 AATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A+ ++   +A   D   +  + EAA +++++    +           EA++   G GY+ 
Sbjct: 319 ASESVVNLVAGLVDRGFEDYAVEAAISKVLSSEALWRTAD-------EALQIAAGQGYMR 371

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E       R+S  N I  G+   + L
Sbjct: 372 EMPYELALRDSRINRIFEGTNEILRL 397


>gi|330467720|ref|YP_004405463.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810691|gb|AEB44863.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 392

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 22/279 (7%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218
           S+V++  +  ++  W    F  E       P      AIG  GLTE   G+D + + ++ 
Sbjct: 99  SLVSVQGSLAMYAIWR---FGSEEQKQQWLPPMAAGAAIGCFGLTEADFGSDPSGMRTRA 155

Query: 219 QKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           ++  DG  + L+G K W  +  ++D  ++ A+ +  V  FLVP     G+P G     + 
Sbjct: 156 RR--DGSDWVLTGTKMWITNGSIADVAVVWARTDEGVRGFLVPA----GTP-GFTTAEIT 208

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAE 334
            K   R++ T EL   +        L  + G    +  L      I+  ++      L  
Sbjct: 209 RKQSLRASVTSELVLDDVRLPADAMLPAAAGLSGPLSCLNEARFGIVFGALGAAHDCLQT 268

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YAR R +    L      +  +AD++L++     L+  L  + D       + +  +
Sbjct: 269 TVEYARSRQIFDRPLAAYQATQLKLADMSLELGKGMLLAMHLGAAKDAGTLDHRQVSLGK 328

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + +        + A A+  E    +G +G   +  + RH
Sbjct: 329 LNS-------VREAIAIARECRTILGAAGITLDYPVIRH 360


>gi|315506649|ref|YP_004085536.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413268|gb|ADU11385.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 390

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 104/282 (36%), Gaps = 50/282 (17%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------EGRV 253
           +TE   G+D A I    ++  D  + L+G K F++      F ++  V         G  
Sbjct: 128 ITEPGAGSDAANIKLSARRDGDD-WILNGEKTFITGGHDADFAIVIAVTDREKGARHGGA 186

Query: 254 GCFLVPR----------LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLL 299
             FLV R           + +G P  L +  ++    N +G               GF L
Sbjct: 187 TAFLVDRSMGWRSEFIQTMGEGGPASLVFDDVRVPGRNILGEPGQ-----------GFSL 235

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G   +  G          + S  + ++   +S+A  I YA  R   G  +     ++  I
Sbjct: 236 GMEWIGKGRY-------IIPSHALGIAERALSMA--IDYANTRETFGAKIGTNQAIQWMI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD   ++ AA  L  R A +        E++   R  + + K +   M   V+   ++  
Sbjct: 287 ADSETELEAARWLILRAAWTV-------EQSMDPRHASSMAKLYGAGMVNRVVDRVLQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY  E  I R YR+     I  G+     L +   L +G
Sbjct: 340 GGMGYTRELPIERWYRQVRLYRIFEGTDEMQRLIISRDLLRG 381


>gi|215426137|ref|ZP_03424056.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T92]
 gi|289749394|ref|ZP_06508772.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T92]
 gi|289689981|gb|EFD57410.1| acyl-CoA dehydrogenase fadE10 [Mycobacterium tuberculosis T92]
          Length = 650

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 30/271 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  ++D  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKDNLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           I L  L++  +S+  +   +A+      R   +  +   +PV +     +A  I+   A 
Sbjct: 282 IALTTLNAGRLSLPAIATGVAKQALKIAREWSAERVQWGKPVGQHEA--VASKISFIAAT 339

Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI- 430
           ++ L    + +   ++E     RI A + K W  +MA  V  E ++  GG GY    S+ 
Sbjct: 340 NYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESLA 399

Query: 431 ARHYRESPA---------NSILLGSGNAMVL 452
           AR  R  P          N I  GS   M L
Sbjct: 400 ARGERAVPVEQMVRDLRINRIFEGSSEIMRL 430


>gi|62317366|ref|YP_223219.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269343|ref|YP_418634.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022618|ref|YP_001932359.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|254690865|ref|ZP_05154119.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695825|ref|ZP_05157653.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698646|ref|ZP_05160474.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732093|ref|ZP_05190671.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 4 str.
           292]
 gi|256256049|ref|ZP_05461585.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260544602|ref|ZP_05820423.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|297249404|ref|ZP_06933105.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197559|gb|AAX75858.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939617|emb|CAJ12605.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021192|gb|ACD73913.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|260097873|gb|EEW81747.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|297173273|gb|EFH32637.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPISNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|27381488|ref|NP_773017.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27354656|dbj|BAC51642.1| bll6377 [Bradyrhizobium japonicum USDA 110]
          Length = 409

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 100/251 (39%), Gaps = 31/251 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--------QVEG 251
            GL+E   G+D+  + ++  +  DG       +W  ++P +D  ++ A        Q +G
Sbjct: 146 FGLSEPDAGSDVFGMKTRAVRDGDGWVITGTKQWITNAPHADYAMIFAVTNEDLVRQRKG 205

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNV 304
            +  F +     + S  G     +   +G+  + T       V +      G +   L+V
Sbjct: 206 GITGFFI-----ETSTRGFSVPSVIPTMGHLGSETGIISLDQVRVPDEQRLGAVDNGLSV 260

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           + G V   ++ +    A   +   R +L +A+ YA  R   G  +     ++  IA  A 
Sbjct: 261 AIGGVSVGRLAM----AGSCIGLARWALRQAVDYAAIRKTGGRPIASHQAIQTMIARCAT 316

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI AA +++   A   D+    +++ +       + K +  +M   V+ + ++  G  G 
Sbjct: 317 DIYAAKSMTRDCAWRIDQGLPATKQVS-------MVKMYATEMLNRVMDQCIQVHGAMGL 369

Query: 425 IEERSIARHYR 435
             E  +   YR
Sbjct: 370 SNELRLEAGYR 380


>gi|221199902|ref|ZP_03572945.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221207429|ref|ZP_03580438.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221172632|gb|EEE05070.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221180141|gb|EEE12545.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 378

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 28/237 (11%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGR------VGCFLVPRLL 262
           ++  + ++ ++ SDG + L+G K  +      AF ++ A+V GR      +G F+VP   
Sbjct: 131 ELTTVRTRAERTSDG-WVLTGAKGVVDQAAQAAFFVVSARVAGRDDDAAGIGLFVVP--- 186

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-- 317
              +  G+  +  +   G R+    E+ F          LG+ +   G     ++L Y  
Sbjct: 187 --ANAAGVSLRDYRKIDGGRA---AEVRFERVVLPADAALGEHDGEQGAALLERVLGYGL 241

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  +  ++  M V+ A  + Y R R   G  +     ++  +AD+ L++  A +     A
Sbjct: 242 LALSAEALGAMDVAKAHTLEYLRTRKQFGMPIGSFQALQHRMADLLLEVEQARSAVINAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              D  +   E A  A       KY   ++   V  E+++  GG G   E  ++ HY
Sbjct: 302 AQLDAPRDLRERALAA------AKYTIGRIGTLVAEESIQLHGGIGMTWELPLS-HY 351


>gi|325192577|emb|CCA27006.1| acylCoA dehydrogenase putative [Albugo laibachii Nc14]
          Length = 337

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254
           LTE   G+D  ++ ++ +K  DG  Y L+G K W  ++  +  F++ A V+   G     
Sbjct: 167 LTEADSGSDAFSLKTEAKKSPDGSYYTLNGQKMWISNAEYAGLFLVFATVDSSQGYKGIT 226

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           CF V R  E     G+   + ++K+G R+++T  +  +N
Sbjct: 227 CFFVDRKSE-----GIEIGKAEDKLGIRASSTCPVYLNN 260


>gi|330504320|ref|YP_004381189.1| acyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
 gi|328918606|gb|AEB59437.1| acyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
          Length = 387

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  D  Y ++G K W      SD  I+LA+          
Sbjct: 122 MGVTEPTTGTDTTKIKTTAVKKGDK-YVINGQKVWISRVQHSDLMILLARTTPLAEVQRK 180

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  FLV   L +   NGL  Q + N + + +N   EL F N               
Sbjct: 181 SEG-MSIFLVD--LREAIGNGLTVQPIANMVNHETN---ELFFDNLEIPASSLIGEEGKG 234

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +   R  + ++  YAR R V G  +     
Sbjct: 235 FRYILDGLNAE-------RTLI----AAECIGDGRWFIEKSAQYARDRVVFGRPIGQNQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA+  ++I AA  + +R    +D  ++    A  A       KY   K +      
Sbjct: 284 VQFPIAEAHIEIEAADLMRWRACEEYDAGRNAGAAANMA-------KYLAAKASWEAANA 336

Query: 415 AMECIGGSGYIEERSIARHYRES 437
            ++  GG G+  E  + R +RE+
Sbjct: 337 CLQTHGGFGFANEYDVERKFRET 359


>gi|258510162|ref|YP_003183596.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476888|gb|ACV57207.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 373

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  MR SL   I Y  +R   G  +     +   +AD+A++  AA  L ++ A++ D   
Sbjct: 235 VGVMRASLEYTIEYTSQRKAFGQEIPKFQGVSFTVADMAIETEAARNLVWQAAHAVD--- 291

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +R  EA      A        +    V  + ++ +GG+GY++E  + +  R++ A ++L 
Sbjct: 292 NRGAEAMQDAARALAYALRSARF---VTNQGVQMLGGAGYLQEYPVEKWMRDAQAQAVLY 348

Query: 445 G 445
           G
Sbjct: 349 G 349


>gi|302864703|ref|YP_003833340.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315500997|ref|YP_004079884.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302567562|gb|ADL43764.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315407616|gb|ADU05733.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 404

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 49/327 (14%)

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +AG  +S   TS ++ A+    TP    +W P+ F     P   A             +E
Sbjct: 82  DAGIGLSIFGTSLAVAAIYGAGTPEQLVEWVPQCFGDVDSPAVAA----------FCTSE 131

Query: 205 KRGGTDIAAITSQG--QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CF 256
              G+D+ ++ ++    + +D  + L+G K + ++  ++   ++ A +E  +G      F
Sbjct: 132 PEAGSDVGSMRTRAVYDEATDE-WVLNGQKAYATNGGIAGVHVVTASIEPELGSRGQAAF 190

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV--------- 304
           +VP     G+P GL   R   K+G R++ T ++   +       LLG  +          
Sbjct: 191 VVP----PGTP-GLTATRKLRKLGLRASHTADVFLDDVRVPGRCLLGGKDALDERLARAR 245

Query: 305 ----STGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++G        +   +      G+ R +   A+ YA+ R   G  +I    +  A+
Sbjct: 246 SGQRASGQAAMRTFELSRPTVGAQALGVARAAYEYALDYAKERVQFGRPIISNQAVAFAL 305

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ ++I AA  L +R   S+    +R   A    +    +K    ++A +V  +A++ +
Sbjct: 306 ADMKMEIDAARLLVWR--ASWMGRNNRPFTAGEGSM----SKLKAGEVAVSVTDKAVQLL 359

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+G++ +  + R YR++   +I  G+
Sbjct: 360 GGAGFLRDHPVERWYRDAKIYTIFEGT 386


>gi|225629269|ref|ZP_03787302.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|261220624|ref|ZP_05934905.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|265986335|ref|ZP_06098892.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265996029|ref|ZP_06108586.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|225615765|gb|EEH12814.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|260919208|gb|EEX85861.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|262550326|gb|EEZ06487.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264658532|gb|EEZ28793.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 395

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+       ++ 
Sbjct: 130 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 188

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   +     NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 189 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 245

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 246 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 294

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 295 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 344

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 345 CVQTHGGFGFAEEYDVERKFRET 367


>gi|51594909|ref|YP_069100.1| acyl-CoA dehydrogenase [Yersinia pseudotuberculosis IP 32953]
 gi|186893911|ref|YP_001871023.1| acyl-CoA dehydrogenase domain-containing protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51588191|emb|CAH19798.1| possible acyl-CoA dehydrogenase [Yersinia pseudotuberculosis IP
           32953]
 gi|186696937|gb|ACC87566.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 392

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  + E IHY +R      +L +   ++ AI  + + +  A A+ +       E ++R E
Sbjct: 250 RAIIEETIHYLQRTIRYDELLAEMQHVQAAIGRMTIALETARAMVYHSL----ERQARKE 305

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              Y   ++   K++  +    ++  A++  GG GY E+  + R +R+   +S+L G+  
Sbjct: 306 SDPYWDPISSAAKHYAIEQINMIVLTALKLTGGWGYTEDSGLGRSHRD--FSSMLAGADP 363

Query: 449 AMVLDV 454
              L+V
Sbjct: 364 QEKLEV 369


>gi|313499838|gb|ADR61204.1| Acyl-CoA dehydrogenase, putative [Pseudomonas putida BIRD-1]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 29/288 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +   A+   LTE   G+D  AI +  ++  +  Y L+G K ++S +P +D  ++LA 
Sbjct: 120 PVCRAEKAVCFALTESEAGSDATAIKTSARREGEH-YVLNGAKRYISGAPYADIAVLLAV 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA---------TVELEFSNTFGFLL 299
            +   G   +     D S  G+   R+++     S            V +  +N  G   
Sbjct: 179 TDPGRGAQGISAFFVDLSAPGV---RVESDYSVMSGGGAHGDIILDDVRVPAANRIGEEG 235

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++ G +   ++L         +    ++L  +I YAR R   G  +     +   I
Sbjct: 236 QGFKLAMGRITLNRLL----HCPTLLGLAGLALNLSIDYARTRKQFGQPIAMFQSINHMI 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA ++ +  A   D   +        R  AP+ K +  + A  +   A++  
Sbjct: 292 ADMATELHAARSMVYATAAVNDAGGN-------IRTQAPMCKLFVSETAFRIADRAVQIH 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           GG+G +    +   +R +    IL G+         N + KG  + EQ
Sbjct: 345 GGAGLVRGNPVEWIFRATRMMRILTGTSEIQ----RNTIAKGVLMPEQ 388


>gi|303312773|ref|XP_003066398.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240106060|gb|EER24253.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 445

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +++ +        KW  ++  +D +   A   G  G   + 
Sbjct: 172 LGITEPDAGSDVSGIKTTAKRVGNKYIVNGAKKWITNAIFAD-YCTAAVRTGGPGRNGIS 230

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+      G+  +R+ N   N S +T  LEF +               F +++ + N  
Sbjct: 231 LLIIPLKSKGVTRRRMYNSGVNASGSTF-LEFDDVEVPAENLIGKENQGFKYIMSNFNPE 289

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + + S+ + +S  RV + +A +YA  R   G  LI   +++   +     
Sbjct: 290 R---------LGMASSCIRLS--RVCVEDAYNYAITRETFGKPLIYNQIIRAKFSKFGQL 338

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +         E     + A + K    +    V  EA + +GG+GY
Sbjct: 339 IEPCQAFLEQLAYTIQLNAKTGREIDVGGMTA-LLKVMSTRCLEKVCREAQQILGGAGY 396


>gi|311108076|ref|YP_003980929.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762765|gb|ADP18214.1| acyl-CoA dehydrogenase, N-terminal domain protein 15 [Achromobacter
           xylosoxidans A8]
          Length = 382

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 25/272 (9%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
           AP        G GL+E  GG+++ A+ ++ +++  G + L G K +++ +P +D  ++ A
Sbjct: 114 APALAGRKVAGFGLSEPDGGSNVRAMKTRAERVEGG-WRLHGSKLYITNAPFADFLLVAA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
           +    +    +   + +    G    +LK K G R++ T  +   + F     LLG+   
Sbjct: 173 RTSPELRPESISLFIVELPNPGFDISKLK-KEGIRASETALIHIDDAFVPDDCLLGETE- 230

Query: 305 STGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAI 359
            T P+    IL  L    + V+    GM  +  +A        +  G  I Q   +   +
Sbjct: 231 GTYPL----ILESLSENRVGVAANALGMARAAFDAATAYANDRLVAGKRIGQYQAIGHKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+++  I AA  L +  A   D+    +  AA  +++A        + A +V  +A+   
Sbjct: 287 AEMSAQIEAARWLVYYGAWRVDQGTLDAATAARVKLVA-------SETAVSVSEQAIRIF 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG+G + E  + R +R+  A   ++G G + +
Sbjct: 340 GGAGIMREYPVGRIHRD--ALVYIIGEGTSEI 369


>gi|84501820|ref|ZP_00999978.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84389815|gb|EAQ02449.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 388

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 59/276 (21%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248
           P+ K        +TE   G D + + ++  +  D  Y ++G K W  ++ M+   +++A+
Sbjct: 114 PLIKGEERACFAITEPNSGLDTSRLQTRAVRKGDH-YVMTGEKVWPTAASMAQRMLVIAR 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKN---------KIGNRSNATVEL---------- 289
            +    C    R ++  S   L Y R+           K+G  +  + ++          
Sbjct: 173 TKPIEEC---ERPIDGLS---LFYTRMDPDYVKTRKIPKLGRNAVESCQIFIDGLKVPEE 226

Query: 290 ----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
               E    F +LL  LN         +IL+    A  SV   RVSL  A  YA+ R   
Sbjct: 227 DRIGEEGKGFYYLLDGLNPE-------RILV----AAESVGLGRVSLRRATEYAKER--- 272

Query: 346 GGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
             ++ D+P+     ++  +A   +++ +A  +  + A  +D  +    EA  A+ +    
Sbjct: 273 --VVFDRPIGKNQGIQHPLAKSWMELESANLMMLKAATLYDAGEPCGAEANSAKYLGAEA 330

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            Y  C+        A+   GG GY +E  + R+ RE
Sbjct: 331 GYRACEC-------AVMTHGGYGYAKEFDVERYLRE 359


>gi|306841668|ref|ZP_07474356.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306288263|gb|EFM59645.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 388

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+     +G   
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKQ 181

Query: 255 CFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
              +  L+ D      NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMVKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|254486410|ref|ZP_05099615.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214043279|gb|EEB83917.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 384

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 45/328 (13%)

Query: 140 LYLMAQLEAGHLMSPSVT-----SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           + +M +L A   M P  +      A  +    +  V ++W PK             M   
Sbjct: 72  MVVMEELAAAGAMGPGFSLHSDIVAPYILHYGSDAVKQEWLPK-------------MAAG 118

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVE 250
                + +TE   G+D+  I +   +  D  Y ++G K F+++  +   ++LA       
Sbjct: 119 EAIGAIAMTEPAAGSDVQGIKTTAIRDGDD-YVINGQKVFITNGGNCDIVVLACKTDPAL 177

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
           G  G  L+  L+   +P      +L  KIG ++  T EL F N       LLG       
Sbjct: 178 GAKGTSLL--LVPADTPGFRKGSQLLEKIGWKAQDTAELFFDNVRVPATNLLGAEGRGFY 235

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA---- 363
            + +      L   + + + +  +L   I +   R   G  + D    +  +A+I     
Sbjct: 236 QLMEQLPQERLLQCVRATAALEAALQWTIDHVTERKAFGKTIADFQNTRFKLAEIKAQSV 295

Query: 364 -LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + +     L   +A   D     + +AA  +++   T   C       + + ++  GG 
Sbjct: 296 LMRVFTDKCLELHVAGELD-----AVDAAMGKMLTSETLCRC-------LDDLLQMFGGY 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ E  IAR + ++    I  G+G  M
Sbjct: 344 GYMWEYPIARAWADARVGRIAGGTGEVM 371


>gi|78066286|ref|YP_369055.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77967031|gb|ABB08411.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 27/250 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   +T+Q ++  D  Y LSG K W  ++ +++  +++A+         +
Sbjct: 124 FAVTEPDAGLDTTHLTTQARRDGDH-YVLSGRKIWISTAQVANKMLIIARTTS------L 176

Query: 259 PRLLEDGSPNGLCYQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312
            ++ +      L Y  L ++++  R    +  +  ++    + +L VS G +     +  
Sbjct: 177 DQVAKPTDGLSLFYTDLDRSRVEVREIEKMGRKAVDSNMLFIDNLRVSEGDLIGNEGDGF 236

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + L++ L+   + ++   + L +     A  YA  R V G  +     ++  +A   + +
Sbjct: 237 RYLLHGLNPERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +  + A  +D  +S   EA  A+ +     +  C+ A A         GG GY +
Sbjct: 297 EAAWLMVMKAATRYDAGQSCGAEANAAKYLGAEAAFQACQTAVAT-------HGGMGYAK 349

Query: 427 ERSIARHYRE 436
           E  + R+ RE
Sbjct: 350 EYHVERYLRE 359


>gi|67642896|ref|ZP_00441647.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121599134|ref|YP_993854.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385821|ref|YP_001026918.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|121227944|gb|ABM50462.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|238524112|gb|EEP87547.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
          Length = 217

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 33/61 (54%)

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R++  A    + P+ K W  +M   V +  ++  GG G+IEE   A++YR++   +I  G
Sbjct: 2   RAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMGFIEETGAAQYYRDARILAIYEG 61

Query: 446 S 446
           +
Sbjct: 62  T 62


>gi|326333802|ref|ZP_08200035.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325948384|gb|EGD40491.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 390

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 33/260 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D A    + + + DG  + L+G K W  ++ +S+ + +LA  +       + 
Sbjct: 129 LSEPDAGSDAA--NQKTRAVRDGDFWVLNGVKRWITNAGVSEYYTVLAVTDPEKRSKGIS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + + S  G+ +   + K+G + + T E+ F N       L+G         E+ K   
Sbjct: 187 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRLIG---------EEGKGFT 237

Query: 317 Y----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           Y    LD   ++++   V +A+     A+ Y + R   G  + +   ++  +AD+ + I 
Sbjct: 238 YAMQTLDHTRITIAAQAVGVAQGALDYALGYIKERKQFGKPIAEFQGVEFMVADMGMKIE 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L++        A  RSE             K +   +A  V  +A++ +GG G+  
Sbjct: 298 AARQLTY-------AAAGRSERGDKDLTFFGAAAKAFASDVAMQVTTDAVQLLGGYGFTR 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R  R++    I  G+
Sbjct: 351 DYPVERMMRDAKITQIYEGT 370


>gi|324997225|ref|ZP_08118337.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 393

 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 36/266 (13%)

Query: 189 APMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IM 245
           AP+    V     +TE     G+D  A+ +   ++ DG + + GHKWF++     AF I+
Sbjct: 118 APLAAGDVRSCFAMTEPAPGAGSDPDALATVATRV-DGGWRIDGHKWFITGADGAAFAIV 176

Query: 246 LAQVEG----RVGCFLVPRLLEDGSPNGLCYQR-LKNKIGNRSNATVELEFSNTF---GF 297
           +A+  G    R G  +    L D S  G+   R +     +     +E+EFS+       
Sbjct: 177 MARTAGVPGERGGATM---FLVDASNPGMKIGRHIPTLDESLYGGHLEVEFSDCRVGDDA 233

Query: 298 LLGDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           +LG+++       V  GP      + +L  A       R +   A+  A  R + G  L 
Sbjct: 234 VLGEVDQGYRYAQVRLGPARMTHCMRWLGLA-------RRAQDIAVARAADRKLFGSRLA 286

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D  + +  +AD  +D+ A+  L  R     D+ +S   E +       I K +  +    
Sbjct: 287 DLGMAQAMVADNEIDLHASRGLILRACWELDQGRSAGMEVS-------IAKTFTAEAVWR 339

Query: 411 VIAEAMECIGGSGYIEERSIARHYRE 436
           V+  +++  G  G   +  + R  RE
Sbjct: 340 VVDRSLQLCGSLGVSGDIPLGRFLRE 365


>gi|324504740|gb|ADY42043.1| Medium-chain specific acyl-CoA dehydrogenase 10 [Ascaris suum]
          Length = 420

 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 118/260 (45%), Gaps = 31/260 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253
           +TE   G+D++A+ ++ +K  D  Y ++G K W  +   ++ F +L + +       G+ 
Sbjct: 151 VTEPGAGSDVSAVRTRSEKKGDE-YVINGTKMWITNGGHANWFFVLTRSDPDPKVSAGKA 209

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
              F+V     DG+  GL   + +  +G R++ T  + F +     +   NV   P E  
Sbjct: 210 FTAFVV-----DGNAPGLSRGKKEVNMGQRASDTRAITFEDV---RVPAKNVIGAPGEGF 261

Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           K+ ++  D     V+ +   L+     EA  YA  R   G  + +   +   +AD+ +++
Sbjct: 262 KVAMMTFDKTRPLVAALATGLSARCVDEASKYALERKTFGQPIANHQGVSFMLADMVINM 321

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  +++R  ++++ AK  +   AY    + I K +    A A    A++  GG+G+  
Sbjct: 322 ELSRLVTYR--SAWEIAKGGT--GAY---FSSIAKCFAADTANAAATNAVQIFGGNGFNS 374

Query: 427 ERSIARHYRESPANSILLGS 446
           E  + +  R++    I  G+
Sbjct: 375 EYPVEKLMRDAKIFQIYEGT 394


>gi|306846021|ref|ZP_07478588.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306273656|gb|EFM55501.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
          Length = 388

 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+     +G   
Sbjct: 123 FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKQ 181

Query: 255 CFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
              +  L+ D      NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 182 TDGLSVLIVDMVKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 238

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    ++++YA+ R + G  +     ++ 
Sbjct: 239 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 288 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 337

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 338 CVQTHGGFGFAEEYDVERKFRET 360


>gi|312199435|ref|YP_004019496.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230771|gb|ADP83626.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 434

 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 100/266 (37%), Gaps = 34/266 (12%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+    +     +TE +GG D    T+      D  + ++G KWF S     +F+++  V
Sbjct: 124 PLLDNRIVSAFSMTEPQGGADPKIFTTSAAPAGDD-WVINGEKWFTSYARMASFLIVMAV 182

Query: 250 EG-------RVGCFLVPRLLEDGSPN-----GLCYQRLKNKI-GNRSNATVELEFSNTFG 296
                    R   F+VP   E    N     G+ Y+ +   I G  S   V +   N  G
Sbjct: 183 TDPDAPPYQRQTMFIVP--AETPGVNVLRSVGMGYEPVGEGIEGYVSYENVRVPAENMLG 240

Query: 297 -----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                FL+    +  G +      + L   I  +   R         A  R+  G +L +
Sbjct: 241 PRGGAFLVAQSRLGGGRIHHAMRTVGLVGRIFDMLCER---------AVSRYTQGEVLAN 291

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           + +++  +AD  ++I A   L+ R A   D+      +A  A I A   K    K+   V
Sbjct: 292 KQLVQEMVADSWMEIEAFRLLTLRTAWKIDQLHDY--KAVRADISA--VKAMMQKVLHDV 347

Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437
            A A++  G  G   E     +  ES
Sbjct: 348 SARALQLHGSLGTTHEMPFVHYLVES 373


>gi|294650321|ref|ZP_06727688.1| butyryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823734|gb|EFF82570.1| butyryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 348

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 9/115 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ ++G   +
Sbjct: 79  MAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADSVVVWATLDKKLGRAAI 137

Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTG 307
              ++  G+P G+  +RL++K+G +++ T  + F +       LLG  D++V+ G
Sbjct: 138 KSFVVTKGTP-GMKVERLEHKLGIKASDTAVISFIDCRVPAANLLGNPDIDVAKG 191


>gi|319792096|ref|YP_004153736.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315594559|gb|ADU35625.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 388

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 100/263 (38%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
           +G+TE   GTD   I +   K  D  Y ++G K W      SD  I+LA+          
Sbjct: 123 MGVTEPSTGTDTTKIKTTAVKKGDR-YVINGQKVWISRIQHSDLMILLARTTPLADVKKK 181

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------T 294
            EG +  F+V   L +    G+  Q + N + + +N   EL F N               
Sbjct: 182 SEG-MSIFIVD--LREAIGKGMTVQPILNMVNHETN---ELFFENLEIPAENLIGVEGQG 235

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F ++L  LN         + LI    A   +      + +   Y + R V G  +     
Sbjct: 236 FKYILDGLNAE-------RTLI----AAECIGDGYWFIDKVTAYTKERVVFGRPIGQNQG 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA+  ++I AA  + +     FD  +    +A  A       KY   K +      
Sbjct: 285 VQFPIAEAFIEIEAANLMRYEACRLFDAHEPCGAQANMA-------KYLAAKASWEAANA 337

Query: 415 AMECIGGSGYIEERSIARHYRES 437
            ++  GG G+  E  I R +RE+
Sbjct: 338 CLQFHGGFGFACEYDIERKFRET 360


>gi|54026465|ref|YP_120707.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017973|dbj|BAD59343.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 468

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 20/241 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           + E R   D  A+ ++  +   G Y L+G K  + +   ++ F++ A+++GR   F+V  
Sbjct: 229 IAEPRPLFDPFALQTKATRSPSG-YRLNGVKSLVPAAADAELFLVAAELDGRPALFIV-- 285

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE--DMKIL 315
              +    GL  +     +G R+     L  +N   +   +LGD + +    E  D   L
Sbjct: 286 ---ESDAQGLVVE-ADPSMGLRAAGIGRLILNNVAVSAEAVLGDSDPAARAEEYADAVRL 341

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A ++V   +  L   I Y   R   G  +  +  +   +A+IA+++     ++ R
Sbjct: 342 ARLGWASLAVGTGQAVLDYVIPYVNEREAFGEPISHRQAVAFMVANIAIELDGIRLVTMR 401

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   ++ +S   EAA AR +A             +  + ++ +GG G+ +E  + R YR
Sbjct: 402 GAARAEQGRSFGREAALARKLA-------TDKGMQIGLDGVQLLGGHGFTKEHPVERWYR 454

Query: 436 E 436
           +
Sbjct: 455 D 455


>gi|295691036|ref|YP_003594729.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432939|gb|ADG12111.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 434

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++    V+L + I     R   G  L D  V ++ IA+  +DI     L  + A+  D+A
Sbjct: 280 TIGAAEVALEKMIKRLMTRKAFGKYLSDHSVWEQRIAEARIDIEMCRLLCLKAADMMDKA 339

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            ++S     AR+   + K    ++A  VI +A++  GG+G   +  +A+ Y
Sbjct: 340 GNKS-----ARLEIAMIKVAAPRIALKVIDDAIQAHGGAGVTTDFGLAKLY 385


>gi|311746770|ref|ZP_07720555.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578449|gb|EAZ82613.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 385

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 14/256 (5%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D+  I +      D  Y ++G K F+++  +SD  ++  + +   G   +
Sbjct: 129 IAMTEPGAGSDLQGILTSAVDQGDH-YLVNGTKTFITNGYLSDVVVVAVKTDPNKGAKGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
             L+ D    G    +   K+G  +  T EL F +    ++   N+     E  K L+  
Sbjct: 188 SLLIIDKDMKGFTRGKPFQKVGLHAQDTCELFFEDV---IVPKENLLGNEGEGFKYLMTE 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA---LDIAAATALSF 374
           L    + VS   V+L E +  A   +V       +   K+++++       +A  TA   
Sbjct: 245 LAQERLVVSLAAVALGEYMLEATVDYVK-----TRKAFKKSLSEFQNTRFKLAEMTAALE 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +     D       +      MA   KY   ++   V  E ++  GG GY+ +  +AR Y
Sbjct: 300 QGRIYCDHLVQLHNQGLLDSAMASAAKYNMTELQCKVADECVQLHGGYGYMWDYGVARAY 359

Query: 435 RESPANSILLGSGNAM 450
            ++    I  G+   M
Sbjct: 360 ADARVQRIYAGTNEIM 375


>gi|327283886|ref|XP_003226671.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 371

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 21/223 (9%)

Query: 174 WAPKIFSREYDPTNKAP----MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           W   +F +E       P    M+K +      LTE   G+D A++ +  ++  D  Y L+
Sbjct: 126 WMVDVFGKEEQRQRFCPSLCSMEKLASYC---LTEPGSGSDAASLLTSAKRDGDN-YILN 181

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+S    +D ++++ +  G     +   +LE G+P GL + + + K+G  S  T  
Sbjct: 182 GSKAFISGGGDTDLYVVMCRTGGPGPKGISCLVLEKGTP-GLSFGKKERKVGWNSQPTRA 240

Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + F       +N  G      N++   +   +I I    A  S+     S+  A  + + 
Sbjct: 241 VVFEDCAVPVANRLGEEGQGFNIAMKGLNGGRINI----ASCSLGAAHASILLARDHLKV 296

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           R   G +L +   ++  +A++A  + AA  +    A +  E +
Sbjct: 297 RKQFGDLLANYQYLQFQLAEMATRLVAARLMVRNAARALQEER 339


>gi|296418295|ref|XP_002838777.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634738|emb|CAZ82968.1| unnamed protein product [Tuber melanosporum]
          Length = 83

 Score = 38.9 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R + A + R  A + K +  ++A  V   A+E +GG G++ E    +++R+S   +I  G
Sbjct: 5   RRKLAGFVR-EAAMAKLYASQVAQKVSGSAIEWMGGMGFVREGLAEKYWRDSKIGAIYEG 63

Query: 446 SGNAMVLDVLNLLEK 460
           + N  +  ++ LL+K
Sbjct: 64  TSNIQLKTIVKLLQK 78


>gi|163797872|ref|ZP_02191816.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
 gi|159176834|gb|EDP61402.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
          Length = 396

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 47/262 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD  ++ +  +K+ +  Y ++G K W   +  SD  ++LA+   +      
Sbjct: 130 FGVTEPTSGTDTLSLRTTAKKVGNEHYVVNGQKIWTSRAEHSDLMLLLARTTAKDQVAKR 189

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
              +  F+V   + +   NGL  + ++  +   +++T E+ F +               F
Sbjct: 190 TEGLSVFVVD--MREAVGNGLTIRPIRAMV---NHSTTEVFFDDLKVPAENLIGEEGKGF 244

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +++  +N         ++LI  +    S+   R  +  A  YA+ R V G  +     +
Sbjct: 245 RYIIDGMNAE-------RLLISHE----SLGDARWFIRTATEYAKAREVFGRPIGQNQGV 293

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA    +  AA  ++ +    F+ +K    EA  A+++A        + A       
Sbjct: 294 QFPIARAFAETEAAALMAEKGVRLFEGSKPCGAEANMAKMLA-------AEAAWHAAEAC 346

Query: 416 MECIGGSGYIEERSIARHYRES 437
           M+  GG  + EE  + R +RE+
Sbjct: 347 MQTHGGFAFAEEYDVERKFREA 368


>gi|254483137|ref|ZP_05096371.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036659|gb|EEB77332.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 390

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 13/243 (5%)

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSP 267
           AIT+  ++  D       +++ +    S+  I+ A+ EG      +  FL+P      + 
Sbjct: 137 AITATWKRSGDDFVLNGNYRYVVDGHTSELLIVAAREEGSTAEDGISLFLLP-----AAT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF--LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            G+  + L      R  A+V+L  S T G   L+G+       +  +  L  +  A   V
Sbjct: 192 AGVTSEWLPTMDQARKQASVDLS-SVTVGAEALMGEAGRGWSQLAKVLDLAAIALAAEQV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G +  L   + Y   R      +     +K   AD+ L    A +  +  A    EA  
Sbjct: 251 GGCQQLLDMTVEYTSERVQFNRTIASFQAVKHKAADMMLQTEVARSGIYYAACVAQEALF 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E A      A I K +C     A+  ++M+  GG G+  E  +  +++ + ++  +LG
Sbjct: 311 GGELAVELPEAASIAKSYCSDAYFAIAGDSMQLFGGVGFTWEYDVHLYFKRAKSSEQMLG 370

Query: 446 SGN 448
            G+
Sbjct: 371 GGS 373


>gi|319942708|ref|ZP_08017014.1| acyl-CoA dehydrogenase domain-containing protein [Sutterella
           wadsworthensis 3_1_45B]
 gi|319803718|gb|EFW00659.1| acyl-CoA dehydrogenase domain-containing protein [Sutterella
           wadsworthensis 3_1_45B]
          Length = 384

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 38/272 (13%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           A  L LTE   G+D  A T+  ++  DG   ++G K F++      ++++   + +    
Sbjct: 121 AYSLALTEPGAGSDNNAATTTWER-KDGKIVINGQKTFITGAAEYPYMLVLARDPKCE-- 177

Query: 257 LVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLL 299
             P+L       D    G+    L +KIG    +T E+   N              GFL 
Sbjct: 178 -DPKLAFSLFWVDAKAPGVKINPL-HKIGWHLVSTCEVYLDNVVVEEKDMVGEEGKGFLN 235

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
              N       +M+ LI   +A         +  +A  YA +R   G  +    +++  +
Sbjct: 236 VMYNF------EMERLI---NASRCTGFAECAFEDAARYANQRIAFGKPIGFNQMIQEKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A + +       L    A   D  +S  E AA A++       +C + A  VI +A++ +
Sbjct: 287 ALMKVKCMNMRHLVLSCAVQADRKESMRETAALAKL-------YCARTALEVIDDAIQIM 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG GY  +  ++R +R+     I  G+   M+
Sbjct: 340 GGLGYTNDARVSRLWRDVRCERIGGGTDEIMI 371


>gi|296387007|ref|ZP_06876506.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 334

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 27/207 (13%)

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HV 344
           + F    G+L+G+ N     +  M     L + +  +     S   A+ YAR R     +
Sbjct: 3   MNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSL 62

Query: 345 SGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEA 390
           +G    D+P         ++R +  +        AL++  A   D      +A  R   A
Sbjct: 63  TGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAA 122

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + PI K +  +    V    M+  GG GYI E  + +  R+     I  G+    
Sbjct: 123 DLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQ 182

Query: 451 VLDVL---------NLLEKGTNLFEQL 468
            LD+L          LL   T L  QL
Sbjct: 183 ALDLLGRKVLGSQGKLLRGFTKLVHQL 209


>gi|329894362|ref|ZP_08270232.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328923158|gb|EGG30481.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 391

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 115/270 (42%), Gaps = 38/270 (14%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           + + +TE   G+D+A + +   +  D  + L+G K ++S+ ++   + +A          
Sbjct: 122 MAIAMTEPDAGSDLAGMRTTAVE-HDDHWVLNGSKTYISNGINADLVFVAAKTDPENNPH 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-- 309
            +  F+V R +      G    R   K+G ++  T EL F+        D+ +    V  
Sbjct: 181 HMTIFMVERGM-----GGFERGRNLKKMGLKAQDTAELFFN--------DVKIPKANVLG 227

Query: 310 EDMKILIYL---------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           E  +  IYL           A+  ++  ++S      Y R+R V G  L      +  +A
Sbjct: 228 EAGRGFIYLMEGLAEERLIGAVGYLAAAQLSWDLTYDYVRQRKVFGKALAAHQNTQFKMA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  ++  A +   +   +F+  +  + +AA A+++         ++  +     ++  G
Sbjct: 288 EMRTELDLAQSYVDQCVAAFNAGQLSAVDAAKAKLV-------TSELQVSAADLGVQMHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G+GY++E  I+R + ++  + I  G+   M
Sbjct: 341 GAGYMDEYPISRQFTDARISPIYAGTSEVM 370


>gi|239918433|ref|YP_002957991.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281415370|ref|ZP_06247112.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239839640|gb|ACS31437.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 400

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLA 247
           AP+ + ++  G  LTE   G+D  ++ +  +    G + L+G  KW  +       I+ A
Sbjct: 131 APVARGTLPGGFALTEPLHGSDSVSLETSARPDGAGGWVLNGAKKWIGNGAAGGITIVWA 190

Query: 248 Q--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +   +G+V  F+V    E  +P G   + +  K   R+    E+  ++     +GD    
Sbjct: 191 RDTEDGQVKGFVV----EQSTP-GYEAEVITGKGALRAIHQAEITLTD---VRVGDDARL 242

Query: 306 TGPV---EDMKILIYLDSAI-MSVSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIA 360
            G     +  ++L+     +  S  G   ++ EA + YAR+R   G  L    +++  +A
Sbjct: 243 PGVATFKDAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLGAHQMVQERLA 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  ++ A       +A      + R E+A+       + KY C + A  V   A + +G
Sbjct: 303 QMLDEVTAMQTRCVAVARLQAAGRLRDEQAS-------LLKYACTRGARRVAQIARDMLG 355

Query: 421 GSGYIEERSIARHYRESPA 439
           G+G + E  + RH+ +  A
Sbjct: 356 GNGILLEHRVMRHFADVEA 374


>gi|154244863|ref|YP_001415821.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158948|gb|ABS66164.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 390

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 96/257 (37%), Gaps = 34/257 (13%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +  +VA    P +   W P++ + E             + + + LTE RGG+D A +  +
Sbjct: 99  NGQIVANFANPEIKGHWLPRLTAGE-------------IMLAIALTEPRGGSDAANLGLR 145

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGL 270
            ++  D  Y L+G K  +S+    A  ++    GR       +    VP         G+
Sbjct: 146 MERSGDH-YVLNGEKTSISAADQAAAAIVFARTGRPEDKAHGISAIFVPM-----DTPGI 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--MSV 325
              R  + +G  +     + F N       LLG+ N   G V+ M+   +  S I    +
Sbjct: 200 STTRFTD-VGQHAIGRGSIFFDNVKVPADHLLGEEN--KGFVQVMQGFDFSRSLIGLQCL 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R SL EA  Y   R   G  L     +   +AD    I  A  LS+      D    
Sbjct: 257 GTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGARLLSYNALWLKDNGLP 316

Query: 386 RSEEAAYARIMAPITKY 402
              EAA A+   P+  Y
Sbjct: 317 HVAEAAMAKWWPPLLAY 333


>gi|301348229|ref|ZP_07228970.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301510755|ref|ZP_07235992.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596946|ref|ZP_07241954.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
          Length = 194

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 232 KWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           ++  ++P +  F ++A+    + G   +   + D    G+   +   K+G +   T ++ 
Sbjct: 1   RFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGKRDKKMGQKGAHTCDVI 60

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           F N       L+G +    G    MK+L    L  A +SV      L ++++YA  R   
Sbjct: 61  FENCRIPASALIGGVE-GVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQF 119

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD   +I AA  +    A   D  ++ S EA+ A++ A        
Sbjct: 120 GQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTEASCAKMFAT------- 172

Query: 406 KMAPAVIAEAMECIGGSGYIEE 427
           +M   V    ++  GG+GYI E
Sbjct: 173 EMCGRVADRCVQIHGGAGYISE 194


>gi|229494048|ref|ZP_04387817.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229319117|gb|EEN84969.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 399

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYA 393
           +  A+ R+  GG + DQ V++  IA+  ++I  A  L  + A   D+  AK    E A  
Sbjct: 277 VRRAQSRNAFGGPISDQGVVRTWIAESRMEIEQARLLVLKTAWLIDQVGAKGAQIEIAAV 336

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +++ P       ++A  V+  +++C GG G  ++  IAR +
Sbjct: 337 KVIGP-------RVARNVLNRSIQCHGGGGVTDDFPIARMW 370


>gi|319764415|ref|YP_004128352.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           BC]
 gi|330826636|ref|YP_004389939.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|317118976|gb|ADV01465.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           BC]
 gi|329312008|gb|AEB86423.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 385

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 100/259 (38%), Gaps = 22/259 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVA----IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +I SR  DP    P  +  V+      + LTE RGG+D A +  + ++  D  Y ++G K
Sbjct: 97  QILSRYGDPGVVGPWLRKLVSGEALCAIALTEPRGGSDAANLRLRVERSGDS-YVINGEK 155

Query: 233 WFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +S+       ++    GR   G   V  LL      G+   R     G R+     + 
Sbjct: 156 TSISAADQADIAVVFGRTGRPEDGAHGVTALLVPMDTPGITTNRFDCH-GQRAIGRGSIF 214

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVS 345
           F N        LGD N   G V+ M+   Y  S I    ++  R +L E   Y  +R   
Sbjct: 215 FENVRVPANHRLGDEN--KGFVQVMQGFDYSRSLIGLSCLAVARAALEETWQYITQREAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L     +   +A    ++  A  L  +     D+    S EA  A       K+W  
Sbjct: 273 GQPLSAFQGVTHPLAAFDTEVEGARLLCLQGLWLKDKGLPHSAEAGMA-------KWWGP 325

Query: 406 KMAPAVIAEAMECIGGSGY 424
           K+A  VI + +   G  GY
Sbjct: 326 KLAYDVIHQCLLSFGHGGY 344


>gi|330835650|ref|YP_004410378.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567789|gb|AEB95894.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 398

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 74/368 (20%), Positives = 146/368 (39%), Gaps = 54/368 (14%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA---------------------RLYL 142
           H +LRRS+ + L   + D+  E   +    ++R                        L L
Sbjct: 19  HEILRRSLREFLEREVKDKVEEGERKGDLLEVREKIKELGLNGLDVSEEYGGASGDYLSL 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +   E    + PS+++  ++  M T  + +  +  +  R        P+ +         
Sbjct: 79  LVATEEMSRVWPSLSTFFLINWMFTSAILRFGSEDLKERYV-----VPVARGERIAAFAN 133

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR---VG 254
           TE   GTD+A ITS  ++I +G Y ++G K F+++  ++D  I+ A+     E R   + 
Sbjct: 134 TEPGAGTDVAGITSVAKEI-NGNYVINGRKIFITNGDLADYIILTARTSPISEPRWKGIT 192

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F++ R  E     G   +   +  G +++ T E+  +      +   NV     E  K 
Sbjct: 193 MFIIERNYE-----GFKVEGRIDTTGLKASHTTEISLNEV---KVPKENVVGKVGEGFKY 244

Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   D A   V+   + +A+A     I Y+  R   G  +    ++++ +++   D+  
Sbjct: 245 AVSSFDYARTIVAAQALGIAQAALEKMISYSLERKSFGQSIASFQMVQQKVSESMADVIT 304

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L +     F   K++ E      + A + K++  + A  V+  AM   GG G     
Sbjct: 305 SRLLVYWAGTLF---KNKMENEYV--MAASLAKFFATESAEKVVLRAMTAHGGYGVTTST 359

Query: 429 SIARHYRE 436
            + R  R+
Sbjct: 360 GLERMLRD 367


>gi|320450888|ref|YP_004202984.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320151057|gb|ADW22435.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 399

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE  GG+D         ++    + L+G K W  +  ++   I+ A+  EGRV  F+
Sbjct: 143 FGLTEPDGGSDPYGNMKTKARLEGDTWVLNGTKMWITNGNLAHIAIIWAKDEEGRVLGFI 202

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP      +P G   + +K+K+  R++ T EL            L  + G    +  L  
Sbjct: 203 VP----TDTP-GFQAREVKHKMSLRASVTSELVLEEVRVPEALRLPKAEGLKAPLSCLTQ 257

Query: 318 LDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               I    +  +     EA+ +A+ R   G  +  + +++  +A++  D      L++R
Sbjct: 258 ARFGIAWGVLGALEAVYTEAVEFAKSRSTFGEPIAKKQLVQAKLAEMLADHTEGLLLAWR 317

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           LA   DE K +  + + A+        W    A  +   A + +GGSG   E    RH
Sbjct: 318 LARLKDEGKLKPAQVSLAKRQ----NVWKALKAARL---ARDILGGSGITLEYHAIRH 368


>gi|170028323|ref|XP_001842045.1| glutaryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus]
 gi|167874200|gb|EDS37583.1| glutaryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus]
          Length = 415

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 59/286 (20%)

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231
           D+  +   ++Y P     M +  +    GLTE   G+D +++ ++         Y LSG 
Sbjct: 133 DYGSEAQKQKYLP----KMARGELIGCFGLTEPNHGSDPSSMETRAVHDPKTKTYVLSGS 188

Query: 232 K-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K W  +SP++D  I+  + E G+V  F+V R     S  GL   +++ K   R++ T   
Sbjct: 189 KTWITNSPVADVCIVWGKTEDGKVRGFIVDR---SESSQGLSTPKIQGKFSLRASDT--- 242

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR-----------------VSL 332
                 G +L D           ++ I  D+ + +VSGMR                 +  
Sbjct: 243 ------GMILMD-----------EVRIPEDNILPNVSGMRGPFGCLNNARYGIAWGALGA 285

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R      L    +M++ +AD+  +I+   A    +    D+     
Sbjct: 286 AESCLKIARGYTLDRKQFKRPLAANQIMQKKMADMLTEISLGLAACLHVGRLKDQKIHTP 345

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           E       M  + K      A  +   A + +GG+G  +E  I RH
Sbjct: 346 E-------MISMLKRNNAGKALEIARVARDMLGGNGISDEYHIIRH 384


>gi|156063668|ref|XP_001597756.1| hypothetical protein SS1G_01952 [Sclerotinia sclerotiorum 1980]
 gi|154697286|gb|EDN97024.1| hypothetical protein SS1G_01952 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 427

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 51/312 (16%)

Query: 150 HLMSPS---VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           H +S S   V +   VA   TP   +   PK+     D T +A           G+TE  
Sbjct: 113 HTISESGADVYATQPVAKFATPSQRQSMLPKLI----DGTWRAC---------FGVTEPN 159

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGC 255
            G +   + ++  +  D  Y ++G K W  S+ ++   ++LA+           EG +  
Sbjct: 160 TGLETLKLKTRAMREGD-TYRITGQKIWISSAQVATNMVLLARTTPIEEVAKPSEG-LSL 217

Query: 256 FLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           F +     D  P   GL  +++K K+G  +    E+ F N   +++   ++     +  K
Sbjct: 218 FFI-----DFDPKQLGLELKKIK-KMGGSAIDANEVFFDN---YVVRSNSLIGKEGQGFK 268

Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367
           I+++ +++    ++G  + L  A  Y   R+    I+  +P+     ++  +AD  + + 
Sbjct: 269 IVLHGMNAERCLLAGEALGLGYAALYRASRYAKERIVFGRPIGMNQGIQHPLADAYMHLE 328

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AA   ++  A  +D  KSR++E        +     KY   + A      ++  +GG GY
Sbjct: 329 AAKLATYHAARLYD--KSRTDETVTQTAVGVACNSAKYLAGEAAFTACERSVLSLGGMGY 386

Query: 425 IEERSIARHYRE 436
             E  + R+ RE
Sbjct: 387 AREYHVERYLRE 398


>gi|326405049|ref|YP_004285131.1| hypothetical protein ACMV_29020 [Acidiphilium multivorum AIU301]
 gi|325051911|dbj|BAJ82249.1| hypothetical protein ACMV_29020 [Acidiphilium multivorum AIU301]
          Length = 399

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 48/262 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD  A+ +  ++  D  Y ++G K W   +  SD  ++LA+   R      
Sbjct: 134 FGVTEPTSGTDTTALRTTARREGDH-YVVNGQKIWTSRAEYSDLMLLLARTTPREQAQKR 192

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------F 295
              +  FL+   + +    GL  + ++  +   ++AT E+ F N               F
Sbjct: 193 TDGLSVFLLD--MREARQAGLTIRPIRTMM---NHATTEVFFDNVRVPAENLIGEEGRGF 247

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            ++L  +N         +ILI  +     +   +  + +A  YA+ R V G  +     +
Sbjct: 248 RYILSGMNAE-------RILIGAE----CIGDAKWFIDKATAYAKERVVFGRPIGQNQGV 296

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +  R A  F+  ++   EA  A+++A    +   ++        
Sbjct: 297 QFPIAKAYARMRAAELMVHRAAALFEAGQNCGAEANMAKMLAAEASWEAAEV-------C 349

Query: 416 MECIGGSGYIEERSIARHYRES 437
           ++  GG G+ EE  + R +RE+
Sbjct: 350 VQTHGGFGFAEEYDVERKFRET 371


>gi|319763089|ref|YP_004127026.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117650|gb|ADV00139.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 390

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 50/262 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------EGR 252
           + LTE   GT+   I +      DG + L+G K W      +D  +++A+       E R
Sbjct: 125 MALTEPDAGTNTLEIKTFAAADGDG-WRLNGRKIWITGVESADKMLVIARTKKLQDAESR 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
                +   + D    GL +  + +K+G     T  L+ S+ F       NV   P E +
Sbjct: 184 TDGLTM--FMIDVKREGLSHTPI-DKLG-----TCTLDSSSVFFD-----NVRVEPDELV 230

Query: 313 --------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV----- 354
                   ++L  L++  M  +   V   E     A+ YA  R V G    ++P+     
Sbjct: 231 GTLHKGWRELLDVLNTERMVTTAGLVGTGELAIRLAVDYANDRKVFG----NRPISAYQG 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A   +++ +A  L+++ A +FD     S EA  A+++A        +        
Sbjct: 287 LQFPLAQCHVEVESARLLNYKAATNFDMGLPYSNEANAAKLIA-------AQAVARATER 339

Query: 415 AMECIGGSGYIEERSIARHYRE 436
           AM+ +GG GY +E  + R +R+
Sbjct: 340 AMQTMGGMGYAKEFHVERLWRD 361


>gi|330825795|ref|YP_004389098.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329311167|gb|AEB85582.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 633

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 129/332 (38%), Gaps = 69/332 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQ 248
           L+E + G+ ++ I ++ +    G         Y L G+K ++S+   +       ++LA+
Sbjct: 173 LSEPQAGSSLSDIATRAEPDGAGFEADPLGPRYRLRGNKMWISAGDHELTENIVHLVLAK 232

Query: 249 VEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           + G  G           F+VP+ L D      G  N +    L +K+G R      L F 
Sbjct: 233 IPGPDGKPVPGVKGISLFIVPKKLVDTEGKLTGERNDVALAGLNHKLGWRGTTNTLLNFG 292

Query: 293 N-------------------TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                                 G+L+G     L      + + +I I + + ++ ++G  
Sbjct: 293 EGRYPVRAGQGGGLDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAATMLGLAGYY 352

Query: 330 VSLAEAIHYARRRHV-SGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            SL  A    + R + SGG         LI+   +KR +         A AL+   A   
Sbjct: 353 ASLDYARTRLQGRPIGSGGKDASSPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLV 412

Query: 381 DEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           DE ++    AA        ++ PI K W  +      + A++  GG GY  +  + +++R
Sbjct: 413 DEGRTGDAGAAADARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWR 472

Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  N I  G+      D+L    +++ G  L
Sbjct: 473 DNRLNMIHEGTHGIQAADLLGRKVVMQGGAGL 504


>gi|226227877|ref|YP_002761983.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091068|dbj|BAH39513.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 402

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 31/269 (11%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E    +  P    +  IG  GLTE   G++ + + ++ ++ +DG + L+G K W  +
Sbjct: 119 FGSEEQKRHYLPKLAKAEYIGCFGLTEPDFGSNPSGMITRARQQADGSWILNGAKMWITN 178

Query: 237 SPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
              +   ++ A+      +  +  F+VP         G   +  K K+  R++ T EL  
Sbjct: 179 GSKAHVAVVWAKTGDSTDDSSIRGFIVPT-----DTPGFQARDQKGKLSLRASDTSELVL 233

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-MSVSGMRVS-LAEAIHYARRRHVSGGIL 349
           S+        L  S G    +  L      I   V G  ++ L EA+ Y++ R     ++
Sbjct: 234 SDVHLPADAILPHSNGLKSPLMCLTQARYGISWGVLGAAMACLEEAVSYSKSR-----VM 288

Query: 350 IDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            D+P     + +  +AD+  ++     +S  L    D          +  +   + K   
Sbjct: 289 FDKPIGGFQIQQVRLADMFTELVKGQLVSLHLGRLKDAGN-------FTPVQVSLAKRNN 341

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARH 433
           C +A  +  E    +G +G + E S  RH
Sbjct: 342 CDIATNIARETRRLLGANGILAEYSAMRH 370


>gi|163792990|ref|ZP_02186966.1| acyl-CoA dehydrogenase, putative [alpha proteobacterium BAL199]
 gi|159181636|gb|EDP66148.1| acyl-CoA dehydrogenase, putative [alpha proteobacterium BAL199]
          Length = 400

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 55/285 (19%), Positives = 114/285 (40%), Gaps = 19/285 (6%)

Query: 190 PMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIML 246
           P+   SV     +TE     G+D + + ++ + + +  + ++G KWF++ +  +  FI++
Sbjct: 121 PIVDGSVRSAFVMTEPSPGSGSDPSMMLTRAEPVGNARWRVNGLKWFITGAEEATHFILM 180

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+        L   +     P     +R+            E+EF N     + D +   
Sbjct: 181 AKTSDDSRKGLTAFMFHKDQPGWRIVRRIPIMGPEEHGGHCEIEFEN---LEIDDRDRLM 237

Query: 307 GPVEDMKIL-IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
              + +K+  I L +A ++     + LA+     AI YA RR   G  L D+  ++  + 
Sbjct: 238 EVGDGLKLTQIRLGTARLTHCMRWLGLAKRSMEIAIEYAERREGFGVRLSDRETIQTMLG 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I     L+ + A          +E + A+I    T +         +  A++  G
Sbjct: 298 DLAYKIEIGRLLTMKAAWKLAAGDFARKEVSMAKIHVADTLH-------EAVDTAIQING 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             GY ++  +   YR +    ++ G+     + +    ++  N F
Sbjct: 351 ARGYSKDTPLEWIYRYARQARLVDGASEVHKMVLARFYQQERNDF 395


>gi|119898222|ref|YP_933435.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670635|emb|CAL94548.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 383

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 47/282 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--- 255
             LTE   G+D+ A++ + +   D  Y ++G K W  +  ++D + + A+     G    
Sbjct: 128 FALTEPLAGSDVGAMSCEARLEGDH-YVINGEKTWISNGGIADVYCLFARTGEAPGTRGI 186

Query: 256 -----------FLVPRLLEDGSPNGLCYQR---LKNKIGNRSNATVELEFSNTFGFLLGD 301
                      F V   L+  +P+ L   R   +K  + NR  A  E       GF +  
Sbjct: 187 SAFVVYPDMPGFEVAERLDTIAPHPLARLRFTDMKVPVANRLGAPGE-------GFKVA- 238

Query: 302 LNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                     M+ L I+  S   +  G  R +L EA+++AR+R + G  L D  + +  +
Sbjct: 239 ----------MRTLDIFRASVAAAALGFARRALDEALNHARQRPMFGHTLADFQLTQAKL 288

Query: 360 ADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            D+A DI AA  L+ R A   D  K   + EAA A++ A        + A  VI  A++ 
Sbjct: 289 GDMATDIEAAALLTARAAWRRDVQKLPTTREAAMAKMTA-------TENAQRVIDAAVQI 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG G      +   YRE  A  I  G+     L V   L K
Sbjct: 342 HGGQGVRIGVMVESLYREIRALRIYEGATEVQKLIVARELLK 383


>gi|70606813|ref|YP_255683.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68567461|gb|AAY80390.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 31/263 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P+  +   IG    TE   GTD+A I S  +K++D  Y ++  K F+++  ++D F++ A
Sbjct: 121 PLTASGEKIGAFANTEPEAGTDVAGIRSTAKKVNDH-YIINARKIFITNGDIADYFVLTA 179

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE---LEFSNTFGFLLGDLNV 304
           +          P    +    G+    ++ + G ++ + +E   L+ S+T   +L D+ V
Sbjct: 180 RTSP-------PS--NNARWKGITMFLVEKEWGVKTVSRIETTGLKASHTTEIILEDVKV 230

Query: 305 STGPV--EDMKILIY----LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353
               V  E+     Y     D A   VS   V + ++     ++Y+ +R      + +  
Sbjct: 231 PAENVIGEEGMGFKYAVESFDYARTIVSAQAVGIGQSAFEKLVNYSLQRKAFDKPIAEFQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +++   D+  +  L++   + ++  K +++E   A   A + K++  + A  ++ 
Sbjct: 291 IVQQKVSESFADLLTSRFLTYWAGSLYN--KGKTDEYIVA---ASLAKFYATEAAEKIVM 345

Query: 414 EAMECIGGSGYIEERSIARHYRE 436
            AM   GG G      + R  R+
Sbjct: 346 RAMTAHGGYGVSNSIGLERMLRD 368


>gi|240280875|gb|EER44379.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 412

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSE 388
           V+L +A  YA+ R V G  +     +   +AD  +++ AA   ++   N +D +K+ +S 
Sbjct: 276 VALEKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNLEAAKLATYHATNLYDASKTDKSI 335

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 +     KY   + A      A+   GG GY +E ++ R+ RE
Sbjct: 336 TQKAVGVACNSAKYLAAEAAFTACERAVLTHGGMGYAQEYNVERYLRE 383


>gi|240171311|ref|ZP_04749970.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium kansasii ATCC 12478]
          Length = 417

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 25/268 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFLVP 259
           +TE   G+D         K     Y L+G K F+++ P +D  ++ A+++ G VG     
Sbjct: 148 ITEPDSGSDAFGGMKTHVKRDGADYILNGQKTFITNGPDADVLVVYAKLDDGPVGDSDAD 207

Query: 260 R--------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST-G 307
           R        +L+ G P GL   +   K+G  S+ T EL F N   T   LLG+    T G
Sbjct: 208 RRNRPVLTFVLDAGMP-GLTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGEQEQHTNG 266

Query: 308 PVEDMKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              D     +    L  A+M++  +       + YA+ R + G  +    +++  +A + 
Sbjct: 267 DGRDSARANFAAERLGVALMALGIINECHRLCVAYAKTRTLWGKNIGQFQLIQLKLAKME 326

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +       + F++       K  S   A A       K +  + A  V  EA++  GG+G
Sbjct: 327 IARINVQNMVFQILERLKAGKLPSLAEASA------IKLYSSEAATDVAMEAVQLFGGNG 380

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y+ E  + +  R++ +  I  GS    V
Sbjct: 381 YMAEYRVEQLARDAKSLMIYAGSNEVQV 408


>gi|262196146|ref|YP_003267355.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079493|gb|ACY15462.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 391

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 19/253 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L LTE   G+D  ++ +  Q+    +  L GHK W      +D F++  + E      LV
Sbjct: 121 LALTEPDTGSDAKSVRTSVQRHGTEL-ALDGHKSWVTYGQSADLFLVFGRAEEGPAAVLV 179

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        GL  + + + +G R++ T  L           +L      +  +     L
Sbjct: 180 ER-----DRKGLRTEPISDLLGLRASMTASLRLEGARVPTDAELGRPGMGIAQIAA-TAL 233

Query: 319 DSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DS   +V+      +R      + Y+ +R   G  L D  ++ R ++++  D+ AA  L 
Sbjct: 234 DSGRYTVAWGCVGILRACTEACVAYSAQREQFGAKLKDHQLISRMVSNMFTDLRAAELLC 293

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   + ++R +  A A     I KY+    A     +A++  G +G   +  + R+
Sbjct: 294 LEAG----QLRARKDPGALA--ATSIAKYFASTAAVRAANDAVQLHGANGCSGDFPLQRY 347

Query: 434 YRESPANSILLGS 446
           + ++    I+ GS
Sbjct: 348 FGDAKVMEIIEGS 360


>gi|262204624|ref|YP_003275832.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087971|gb|ACY23939.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 397

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 51/289 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254
           + +TE   G+D AA+++      D  Y ++G K F+++   +D  ++ A ++  +G    
Sbjct: 127 MAITEPSFGSDSAAVSTTATADGDD-YLINGEKIFVTAGSRADHVVVWATLDKSLGRAAI 185

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+VP   E     G+   RL++K+G +++ T  + F N     +   N+   P  D K
Sbjct: 186 KSFVVPMDTE-----GVTVARLEHKLGIKASDTAVVRFENA---RVPKENLLGSPEIDTK 237

Query: 314 -----ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMKR-----AIA 360
                ++   D+    V+ M V L  A     RR +      I  D+P   +        
Sbjct: 238 KAFGGVMQTFDNTRPVVAAMAVGLGRASLEELRRILEDAGHTIDYDKPAAAQHASVCEFI 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            I  D  A+   + R A   D  +  S EA+ ++  A        +M   +  +A+E  G
Sbjct: 298 RIESDWEASWLHTLRAAWMADNKQPNSAEASMSKAKA-------GRMVTELTNKAVEVGG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            +G+ E   + +  R            +A +LD+     +GT   +QL 
Sbjct: 351 TAGFSETSLLEKWAR------------DAKILDIF----EGTQQIQQLI 383


>gi|119192516|ref|XP_001246864.1| hypothetical protein CIMG_00635 [Coccidioides immitis RS]
          Length = 424

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +++ +        KW  ++  +D +   A   G  G   + 
Sbjct: 151 LGITEPDAGSDVSGIKTTAKRVGNKYIVNGAKKWITNAIFAD-YCTAAVRTGGPGRNGIS 209

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+      G+  +R+ N   N S +T  LEF +               F +++ + N  
Sbjct: 210 LLIIPLKSKGVTRRRMYNSGVNASGSTF-LEFDDVEVPAENLIGKENQGFKYIMSNFNPE 268

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + + S+ + +S  RV + +A +YA  R   G  LI   +++   +     
Sbjct: 269 R---------LGMASSCIRLS--RVCVEDAYNYAITRETFGKPLIYNQIIRAKFSKFGQL 317

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +         E     + A + K    +    V  EA + +GG+GY
Sbjct: 318 IEPCQAFLEQLAYTIQLNAKTGREIDVGGMTA-LLKVMSTRCLEKVCREAQQILGGAGY 375


>gi|47118098|gb|AAT11172.1| putative short-chain acyl-CoA oxidase [Tropaeolum majus]
          Length = 440

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/241 (19%), Positives = 106/241 (43%), Gaps = 24/241 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLV 258
           LTE   G+D + + +   K+  G + L G K W  + P+  ++I+ A+     ++  F+V
Sbjct: 175 LTEPDYGSDASGLRTIATKVEGG-WLLEGQKRWIGTVPLQISWIIFARNTSTNQINGFIV 233

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILI 316
            +        GL   +++NKIG R     ++     F   + D +   G    +D   ++
Sbjct: 234 KK-----DAPGLTATKIQNKIGLRIVQNGDILLKKVF---VPDEDRLPGVNSFQDTNKVL 285

Query: 317 YLDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   +++    G+ + + +  H Y ++R   G  L    + ++ +  +  ++ A   + 
Sbjct: 286 AVSRVMVAWQPIGISMGIYDMCHRYLKQRKQFGAPLAAFQINQQKLVTMLGNVQAMVLVG 345

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL   +++ +  + +A+       + K W    A    A   E +GG+G + +  +A+ 
Sbjct: 346 WRLCKLYEKGQMTTGQAS-------LGKAWISSKARETAALGRELLGGNGILSDFLVAKA 398

Query: 434 Y 434
           +
Sbjct: 399 F 399


>gi|326381986|ref|ZP_08203679.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199412|gb|EGD56593.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 408

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 36/275 (13%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP 259
           +TE   G+D +  + +  ++  D  Y L G+K F+++ P +D  ++ A+++   G  +  
Sbjct: 141 ITEPDSGSDALGGMKTTVRRDGDD-YILKGNKTFITNGPYADTMVVFAKLDEGDGTPMRD 199

Query: 260 R----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           R     + D    GL   +   K+G  S+ T EL F N   +   LLG+ +  TG  +  
Sbjct: 200 RKVLTFVLDKGMEGLSQGKAFKKMGMMSSPTGELFFDNVRVSKDRLLGE-SEDTGSDKRG 258

Query: 313 KILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIA 360
                 DSA    +  R+ +A             +I YA+ R + G     Q + K  + 
Sbjct: 259 G-----DSAKAGFTAERIGIAALSLGIINECQRLSIDYAKTRTLWG-----QEIAKFQL- 307

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECI 419
            I L +A        + N    A   S+      +  A   K +  + A  V  EA++  
Sbjct: 308 -IQLKLAEMEIARLNVQNMLFVAMEASKAGKPPTLAQASAMKLYSSRAATEVAMEAVQLF 366

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           GG+GY+ E  + +  R++ +  I  GS    V  V
Sbjct: 367 GGNGYMAEYRVEQLARDAKSLMIYAGSNEIQVTHV 401


>gi|26988764|ref|NP_744189.1| acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|24983559|gb|AAN67653.1|AE016395_4 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 388

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 29/288 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248
           P+ +   A+   LTE   G+D  AI +  ++  +  Y L+G K ++S +P +D  ++LA 
Sbjct: 120 PVCRAEKAVCFALTESEAGSDATAIKTSARREGEH-YVLNGAKRYISGAPYADIAVLLAV 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA---------TVELEFSNTFGFLL 299
            +   G   +     D S  G+   R+++     S            V +  +N  G   
Sbjct: 179 TDPGRGAQGISAFFVDLSAPGV---RVESDYSVMSGGGAHGDIMLDDVRVPAANRIGEQG 235

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++ G +  +  L++  + +       ++L  +I YAR R   G  +     +   I
Sbjct: 236 QGFKLAMGRI-TLNRLLHCPTLLGLAG---LALNLSIDYARTRKQFGQPIAMFQSINHMI 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA ++ +  A   D   +        R  AP+ K +  + A  +   A++  
Sbjct: 292 ADMATELHAARSMVYATAAVNDAGGN-------IRTQAPMCKLFVSETAFRIADRAVQIH 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           GG+G +    +   +R +    IL G+         N + KG  + EQ
Sbjct: 345 GGAGLLRGNPVEWIFRATRMMRILTGTSEIQ----RNTIAKGVLMPEQ 388


>gi|70986740|ref|XP_748859.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66846489|gb|EAL86821.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159123370|gb|EDP48490.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 436

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 27/256 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV-------E 250
            G+TE   G +   + +   K + G  Y ++G K W   + ++   I+LA+         
Sbjct: 160 FGVTEPNTGLETLKLKTTATKNASGDSYSVTGQKIWITCAQVASKMILLARTTPIEEIKR 219

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
              G  +    L+   P GL  +++K K+G R+    E+ F N       L+G+ N    
Sbjct: 220 STHGLSMFCIDLDRDKP-GLDMRKIK-KMGGRAVDANEVFFDNYQIPTNTLVGEEN---- 273

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI+++ +++    ++G  + L       A  YA  R V G  +     +   +AD
Sbjct: 274 --EGFKIILHGMNAERCLLAGEALGLGYAALERATQYANDRVVFGRPIGQNQGIAHPLAD 331

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIG 420
             + + AA  +++  A  +D +++ S    ++  +     KY   + A      A+   G
Sbjct: 332 AYMKLEAAKLMTYHAARLYDASRTDSSIPFHSVGVACNSAKYLAAEAAFTACERAVLTHG 391

Query: 421 GSGYIEERSIARHYRE 436
           G GY  E  + R+ RE
Sbjct: 392 GMGYAMEYDVERYLRE 407


>gi|315425347|dbj|BAJ47013.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
          Length = 421

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 36/258 (13%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE  GG+D++++  + ++  DG + +SG K  +S P      ++ ++    G FL+ R  
Sbjct: 142 TEAHGGSDVSSVQVRAERKGDGKWLISGEKSMVSLPS-----VIERMPWGGGWFLIARSG 196

Query: 263 EDG-------------SPNGLCYQRLKNK----IGNRSNATVELEFSNT-------FGFL 298
           + G               NG+  + +  K       R   T  L F N         G +
Sbjct: 197 DPGLKHRTITDFLLLMKRNGVLTKGISYKPWTEFARRGLDTSVLTFQNVEVDDVYRVGEV 256

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G   ++       + +I      + V      +  A+ + R R V G  +     +   
Sbjct: 257 NGGFKIAMEGFNLARTMI----GAVCVGCAEWLMERAVEWVRTRKVFGKPIAAYQGVSFK 312

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAM 416
           IA+ A  + AA  LS++ A   D    R        +  +  + K  C  +A  +  E M
Sbjct: 313 IAEFASALEAAKLLSYKAAWIADRY-YRDGVGTLGDVAKLGAMAKLRCASLAVDIGEEVM 371

Query: 417 ECIGGSGYIEERSIARHY 434
           +  GG+ Y +E  I R +
Sbjct: 372 KIYGGASYFKETPIFRAW 389


>gi|312137597|ref|YP_004004933.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677431|ref|ZP_08157095.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311886936|emb|CBH46245.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551678|gb|EGD21376.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 399

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPI 399
           R+  GG + DQ V++  IA+  ++I  A  L  + A   D   AK    E A  +++ P 
Sbjct: 283 RNAFGGPISDQGVVRTWIAESRMEIEQARLLVLKTAWMIDRVGAKGAQIEIAAVKVIGP- 341

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 ++A +V+  A++C GG G  ++  IAR +
Sbjct: 342 ------RVARSVLNRAIQCHGGGGVTDDFPIARMW 370


>gi|264677471|ref|YP_003277377.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207983|gb|ACY32081.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 393

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 32/257 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPMSDAFIMLA 247
           M    +   +G +E   G+D+A + +Q Q   D   G + ++G K + S   S  ++ LA
Sbjct: 114 MASGDIIFAIGYSEPGAGSDLAMLKTQAQLQGDLQAGHFVVNGQKLWTSGIESADYVWLA 173

Query: 248 QVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNAT----VELEFSNTFGFL 298
               R    L     +  ++ D    G  +  L   +GN + AT    VE+  +   G L
Sbjct: 174 ---ARTNQELARHKGISIMVVDTRDKGFSHT-LIQTVGNYTAATYFDNVEVPAARLIGEL 229

Query: 299 LGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            G   + T  +  E + +  + D              + + +A+ +   G   +DQ  ++
Sbjct: 230 NGGWKLITAQLNHERLGLGAWSDKVF-------APFVKVLQWAKAKDEQGRRAVDQAWVR 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           R++A+    + A    +FR+A S        E  A    +A  TK +  +    V+   M
Sbjct: 283 RSLAECYARLEAMRLTNFRIAASL-------EAGAMDVSLASATKVYGSEGVVEVLHRLM 335

Query: 417 ECIGGSGYIEERSIARH 433
           + +G S  +   S A +
Sbjct: 336 DIVGSSALVRGGSAASY 352


>gi|254480245|ref|ZP_05093493.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039807|gb|EEB80466.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 385

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 20/270 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
           P+  +   IG + +TE   G+D+  + +  ++  D  + ++G K F+++  + D  + +A
Sbjct: 116 PIMISGECIGAVAMTEPGAGSDLQGVRTSARRDGDD-WIINGSKTFITNGQLCDMVVTVA 174

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           + +    G   +   + D +  G    R   K+G  +  T EL + +       LLG+L+
Sbjct: 175 RTDPDAPGSRGLSLFMVDTNKTGFSRGRNLEKLGLHAADTSELFYQDVRLPATALLGELH 234

Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  M+ L    L  A+ +V+ M  +L+  + Y + R   G  L      +  +A+
Sbjct: 235 --RGFIALMQELPRERLALAVGAVAAMEGALSMTVDYVKEREAFGAPLSKLQNTRFKMAE 292

Query: 362 IALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +  +        +RL N+F +E   +          A + KY   +    V+   ++  G
Sbjct: 293 MQTE--------YRLNNAFVNECIDKYNAGELDAATASMAKYATTEAQCRVVDGCLQMFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450
           G GY+ E  I+R Y ++    I  G+   M
Sbjct: 345 GYGYMREYPISRAYADARIQRIYGGTSEIM 374


>gi|160895591|ref|YP_001561173.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361175|gb|ABX32788.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 383

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 24/255 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-------MLAQVEGRVG 254
           LTE RGG+  A + ++  +  D  Y ++G K F+S+     F+       M A   G V 
Sbjct: 127 LTEPRGGSHPADMRTRAVRDGDD-YLITGVKHFISNAAEARFMVVFAKTDMDAGARG-VS 184

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK 313
            F+VPR L      G+     +  +G R     E+            L    TG    MK
Sbjct: 185 AFIVPRDLP-----GIQVSAPEKLMGIRGGHAFEVSLDGVRVPASHRLGAEGTGFKTAMK 239

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L    LD A  ++     +LA A  +A +R V G  L  +  ++  +AD+ L + A+ A
Sbjct: 240 VLDNSRLDVAATALGVAEAALAAAAQWANQRLVGGEPLATKQGIQWKLADMKLRLEASWA 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+ +        +  ++ +A A++ A        +M   V  EA++  GG GY  E  + 
Sbjct: 300 LTMQALALRQAGQPFTQHSAMAKLHA-------SEMVGFVTDEALQIHGGYGYTREMPLE 352

Query: 432 RHYRESPANSILLGS 446
           R  R++    I  GS
Sbjct: 353 RLVRDARILRIYEGS 367


>gi|320102992|ref|YP_004178583.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319750274|gb|ADV62034.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 381

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 34/259 (13%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG--CF 256
           +E   G+D+ A+ S   +  D  + L+G K W  S P++D F+  A     +G +G   F
Sbjct: 128 SEPEAGSDVFAMKSTAVRQGDH-WVLNGRKTWITSGPVADLFVSFAVTHPGQGVMGLSAF 186

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309
           LVP+        G    R   K+G R+    E  F       +N  G       V    +
Sbjct: 187 LVPK-----DAPGFRVVREIRKLGVRTVPMGEAVFEDCRIPAANLLGKEGRGAEVFNCSM 241

Query: 310 EDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           E      +   AI++  +  MR  L   + +AR R   G  +     +  AIAD+ + + 
Sbjct: 242 E------WERGAILAAALGTMRRQLERCVQFARTRVQYGQPIGKFQAVSHAIADMHVRLE 295

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L +++    D  K        A I + I K    +        A+   G  G++ E
Sbjct: 296 TCRPLVYKIGWLKDRGKD-------ATIASAIAKLHVSESFVENSITAVRIFGARGFVAE 348

Query: 428 RSIARHYRESPANSILLGS 446
             I +  R+S  + I  G+
Sbjct: 349 FGIEKDLRDSIGSLIYSGT 367


>gi|319762275|ref|YP_004126212.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317116836|gb|ADU99324.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 633

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 129/332 (38%), Gaps = 69/332 (20%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQ 248
           L+E + G+ ++ I ++ +    G         Y L G+K ++S+   +       ++LA+
Sbjct: 173 LSEPQAGSSLSDIATRAEPDGAGFEADPLGPRYRLRGNKMWISAGDHELTENIVHLVLAK 232

Query: 249 VEGRVG----------CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           + G  G           F+VP+ L D      G  N +    L +K+G R      L F 
Sbjct: 233 IPGPDGKPVPGVKGISLFIVPKKLVDTEGKLTGERNDVALAGLNHKLGWRGTTNTLLNFG 292

Query: 293 N-------------------TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                                 G+L+G     L      + + +I I + + ++ ++G  
Sbjct: 293 EGRYPVRAGQGGGLDGRGAGAIGYLVGKPGEGLKCIFHMMNEARISIGMAATMLGLAGYY 352

Query: 330 VSLAEAIHYARRRHV-SGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            SL  A    + R + SGG         LI+   +KR +         A AL+   A   
Sbjct: 353 ASLDYARTRLQGRPIGSGGKDASSPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLV 412

Query: 381 DEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           DE ++    AA        ++ PI K W  +      + A++  GG GY  +  + +++R
Sbjct: 413 DEGRTGDAGAAADARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWR 472

Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNL 464
           ++  N I  G+      D+L    +++ G  L
Sbjct: 473 DNRLNMIHEGTHGIQAADLLGRKVVMQGGAGL 504


>gi|296140199|ref|YP_003647442.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028333|gb|ADG79103.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 407

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 29/278 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP 259
           +TE   G+D +  + +  ++   G Y LSG K F+++ P +D  ++ A+++   G  L  
Sbjct: 140 ITEPDSGSDALGGMKTTVRRDGAGGYILSGQKTFITNGPYADTIVVFAKLDEGDGTPLRE 199

Query: 260 R----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
           R     + D    GL   +   K+G  S+ T EL F         LLG+   + G     
Sbjct: 200 RKVLTFVLDKGMEGLTQGKAFKKMGMMSSPTGELFFDQVALGPDRLLGETEETPGGGGAS 259

Query: 313 KILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIA 363
               +    +  A +++  +  +   +I YAR R + G       LI   + +  +A I 
Sbjct: 260 AKAGFTAERIGIAALALGIINEAQRLSIDYARTRTLWGQEIGTFQLIQLKLAEMEVARIN 319

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +     TA+         EA    +    A+  A   K +  + A  V  EA++  GG+G
Sbjct: 320 VQNMLFTAI---------EASRAGKPPTLAQ--ASAMKLYSSRAATEVAMEAVQLFGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y+ E  + +  R++ +  I  GS    +  V   L +G
Sbjct: 369 YMAEYRVEQLARDAKSLMIYAGSNEIQMTHVAKGLLRG 406


>gi|118619222|ref|YP_907554.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium ulcerans Agy99]
 gi|183984132|ref|YP_001852423.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium marinum M]
 gi|118571332|gb|ABL06083.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium ulcerans Agy99]
 gi|183177458|gb|ACC42568.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium marinum M]
          Length = 391

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 29/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + LTE  GG+D+  +++           ++G K ++S+      I L     +      P
Sbjct: 128 MALTEPGGGSDLQNMSTTAMADGPDQLLITGAKTWISNARRSGLIALLC---KTDPHATP 184

Query: 260 R-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308
           R       L+E G   GL       K+G +     EL F N    T   L G      G 
Sbjct: 185 RHHGISIVLVEPGP--GLNISADLPKLGYKGVEACELSFDNYRAPTSAILGG--QPGQGF 240

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + MK L    +  A  ++     +L +A+ YA++RH  G  +     +   +AD+A  +
Sbjct: 241 SQMMKGLETGRIQVAARALGVASAALDDALAYAQQRHSFGQPIWKHQAIGNYLADMATKL 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A  +D  +    EA  A++ A  T       A  +   A+   GG GY  
Sbjct: 301 TAARQLTHYAAQRYDSGQRCDMEAGMAKLFASET-------AMEIALNAVRIHGGYGYST 353

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 354 EYDVERYFRDAPL--MIVGEGT 373


>gi|319761095|ref|YP_004125032.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115656|gb|ADU98144.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 400

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCF 256
             +TE   G        Q   + DG  Y ++G KWF++ +  +D  I++A++E G    F
Sbjct: 129 FAMTEPSPGAGADPSMLQATAVRDGGDYVINGRKWFITGADGADYAIVMARMEDGSATMF 188

Query: 257 LV----PRLLEDGSPNGL--CYQ------RLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           L     P ++ + + + +  C+       R +N       A V  E    F +      V
Sbjct: 189 LTDMDRPGIVLESNMDAMDACFTGGHGVLRFENL--RVPAADVLGEIGKGFRYA----QV 242

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P      + +L  A       R +   A+ Y RRRH  G  L++   +   +AD  +
Sbjct: 243 RLAPARLTHCMRWLGQA-------RRAHDTALDYVRRRHAFGKPLVEHEGVGFMVADNDM 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+  A    +  A   D+ +  + E++ A+++       C +    V+  +++ +GG G 
Sbjct: 296 DLHTARLHIWHTAWLLDQGEKCNFESSRAKVV-------CSEAEWRVVDRSVQMLGGQGV 348

Query: 425 IEERSIARHYRESPANSILLG 445
             E  + R + +  A  I  G
Sbjct: 349 TGETPVMRIFTDMRAFRIYDG 369


>gi|302549721|ref|ZP_07302063.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467339|gb|EFL30432.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 379

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 16/251 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+DI  +    + +SDG Y L+G K W  ++P++   +  A     +G   +  
Sbjct: 125 MTEDEAGSDIGRLGVTARPVSDG-YLLNGEKSWASNAPVAGLVVTYACTAPELGFLGLSA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
               G   G+ +     K+G  +     + F++      +LLG     +G  +    + +
Sbjct: 184 FAVPGDLPGVSFGPPLRKMGLTNCLAGRVTFTDCHVPRRYLLGAEGQGSGIFQ--HSMAW 241

Query: 318 LDSAIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +A+  V    M   LA+ + +A RR   G  + +   +   +A +   + +   L +R
Sbjct: 242 ERAALFGVYLGLMERQLAQCVEHAGRRRQFGRRIGEFQAVSHRMAVMKQRLESGRLLLYR 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                DE   R +++A A     + K    + A A   +AM+  GG GY+ +  +    R
Sbjct: 302 ACWLLDE--GREDKSAIA-----LAKATVSEAAVANGLDAMQLFGGLGYLADSGVEEQLR 354

Query: 436 ESPANSILLGS 446
           +S    +  G+
Sbjct: 355 DSLPARVFSGT 365


>gi|311742535|ref|ZP_07716344.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314163|gb|EFQ84071.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 437

 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 107/242 (44%), Gaps = 30/242 (12%)

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +++   +  DG + L G K  +   + ++ FI+ AQ++G    F+V       +P     
Sbjct: 214 LSTTATRTGDG-FVLDGLKSGVVRGLDAELFIVAAQLDGAPALFVVE------APTAGVS 266

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                 +G R+    +L+          LLG+     G ++D +  + L    +  +G+ 
Sbjct: 267 VAADPSMGLRAAGLAQLKLDQVSLPASALLGE-----GTLDDYRECVRLSR--LGWAGLA 319

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAK 384
           +   +A+    + +V G     +P+  R      +A+IA+++     ++ R A+  ++  
Sbjct: 320 LGTGKAVLDYTKDYVVGREAFGEPIAYRQSVAFMVANIAIELEGMRLVTLRAASRAEQGL 379

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E A AR +   T  +  K+      + ++ +GG G+++E  + R YR+  A  ++ 
Sbjct: 380 PYAREVALARRL---TSEYGMKIG----TDGVQLLGGHGFVKEHPVERWYRDLRAVGLME 432

Query: 445 GS 446
           G+
Sbjct: 433 GA 434


>gi|260188180|ref|ZP_05765654.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis CPHL_A]
 gi|289448819|ref|ZP_06438563.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis CPHL_A]
 gi|289421777|gb|EFD18978.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis CPHL_A]
          Length = 468

 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ+ G+   F+V     + + +GL   +    +G R  
Sbjct: 254 YRLDGVKSLIPAAADAELFIVGAQLGGKPALFIV-----ESAASGLTV-KADPSMGIRGA 307

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E    S      LG+   S     +   L  L  A ++V      L   + Y ++
Sbjct: 308 ALGQVELCGVSVPLNARLGEDEASDNDYSEALALARLGWAALAVGTSHAVLDYVVPYVKQ 367

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ +     
Sbjct: 368 RQTFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPFAREAALAKRLG---- 423

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG GY +E  + R YR+
Sbjct: 424 ---SDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 455


>gi|114798530|ref|YP_760790.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114738704|gb|ABI76829.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 384

 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 35/247 (14%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGR------VGCF 256
           E +G  ++A + +   K   G + +SGHK   + +P +   I+ A+  G       VG F
Sbjct: 126 EPKGRYNLADLETTATKDGSG-WKISGHKAVVIGAPWASHLIVTARTSGGRRDAKGVGVF 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-TFGF--LLGDLNVSTGPVEDMK 313
           +V +        G+  +      G R++   E+ F N T G   ++GD + S G VE + 
Sbjct: 185 IVAK-----DAKGVTTRDYPTVDGRRAS---EVHFDNVTVGADAVIGDPSDSLGLVEKV- 235

Query: 314 ILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                D AI ++       M+V+ A+ + Y++ R   G  +    V++  +AD+ ++   
Sbjct: 236 ----TDEAIAALCAEACGAMKVANAQTVDYSKTRKQFGTPIGKFQVLQHRMADMFIEHEQ 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + ++++      +E +   ++AA A       K    +    V  ++++  GG G  +E 
Sbjct: 292 SISMTYMATLKLEEDEVTRKKAASA------AKVRIGQAGRFVGQQSIQIHGGMGMTDEL 345

Query: 429 SIARHYR 435
           +I  +++
Sbjct: 346 AIGHYFK 352


>gi|33595733|ref|NP_883376.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33600257|ref|NP_887817.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33565812|emb|CAE36356.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
 gi|33567855|emb|CAE31769.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           ++ D+P+     ++  +A+  +++ AA+ ++F  A  FD  +S   EA+ A+ +A    +
Sbjct: 273 VVFDRPIGQNQGVQHPLAESWMELEAASLMTFHAAARFDRGESCGTEASAAKYLAAEAGF 332

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             C  A       +   GG GY +E  + R+ RE+
Sbjct: 333 KACTAA-------VMTHGGYGYAKEYHVERYLREA 360


>gi|312140934|ref|YP_004008270.1| acyl-CoA dehydrogenase/2-methylacyl-CoA dehydrogenase [Rhodococcus
           equi 103S]
 gi|311890273|emb|CBH49591.1| acyl-CoA dehydrogenase/2-methylacyl-CoA dehydrogenase [Rhodococcus
           equi 103S]
          Length = 387

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 43/259 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GC 255
            GLTE   G+D     ++ + + DG + ++G+K F+++  +D    + +  V G    G 
Sbjct: 128 FGLTEPGAGSDAGGTRTKAELV-DGEWVINGNKQFITNSGTDITKLVTVTAVTGTKDNGR 186

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
             +  +L   S  G   +   +K+G  ++ T  L F +       LLG+     G    +
Sbjct: 187 KEISTILVSTSTPGFTAEPAYDKVGWNASDTHPLTFQDVRVPETNLLGER--GRGYANFL 244

Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +IL    +  A ++V   +  + E++ YA+ R   G     +P            I A  
Sbjct: 245 RILDEGRIAIAALAVGAAQGCVDESVRYAKEREAFG-----RP------------IGANQ 287

Query: 371 ALSFRLANSFDEAKSRSEEAAYA------------RIMAPITKYWCCKMAPAVIAEAMEC 418
           A+ F++A    EA++ +  AAY             +  A I K    + A     +A + 
Sbjct: 288 AIEFKIARM--EARAHTARAAYYDAAALMLSGKPFKKQASIAKLVASEAAMDNARDATQI 345

Query: 419 IGGSGYIEERSIARHYRES 437
            GG G++ E  +ARHYR+S
Sbjct: 346 FGGYGFMNEYPVARHYRDS 364


>gi|169630030|ref|YP_001703679.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169241997|emb|CAM63025.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 422

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 22/265 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE------GRVG 254
           +TE   G+D         K     Y L+G K F+++ P +D  I+ A+++       R  
Sbjct: 155 ITEPDAGSDAFGGMKTYVKRDGADYILNGQKTFITNGPDADVLIVYAKLDEDDPTMDRRN 214

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
             ++  +L+ G P GL   +   K+G  S+ T EL F N   T   LLG+     G    
Sbjct: 215 RKVLTFVLDSGMP-GLTQGKAFKKMGMMSSPTGELFFDNVRITADRLLGETEEHGGGDGR 273

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366
                   +  + VS M + +    H     YA+ R + G  +    +++  +A + +  
Sbjct: 274 ESARANFAAERVGVSLMALGIINECHRRCLDYAKMRTLWGQNIGQFQLIQLKLAKMEVAR 333

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                + F+        K  S   A A       K +  + A  V  +A++  GG+GY+ 
Sbjct: 334 INVQNMVFQTLEKLQHGKMPSLAEASA------IKLYSSETATDVAMDAVQLFGGNGYMA 387

Query: 427 ERSIARHYRESPANSILLGSGNAMV 451
           E  + +  R++ +  I  GS    V
Sbjct: 388 EYRVEQLARDAKSLMIYAGSNEVQV 412


>gi|150376669|ref|YP_001313265.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150031216|gb|ABR63332.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 387

 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 27/276 (9%)

Query: 187 NKAPMQKTSVA--------IG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           N +P QK++          +G L ++E   G+D+ ++  +  K  D  Y L+G K W  +
Sbjct: 106 NGSPAQKSTYLPKLISGEHVGALAMSEPGSGSDVVSMKLRADKRGD-RYVLNGTKMWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            P +D  ++ A+ +   G   +   L + +  G    R  +K+G R + T EL F++   
Sbjct: 165 GPDADVLVVYAKTDPAAGPRGITAFLVENTFPGFSTGRKLDKLGMRGSNTSELIFTDC-- 222

Query: 297 FLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILI 350
             +   NV     E +K+L+  LD   + +S      M   L   + Y   R   G  + 
Sbjct: 223 -EVPQENVLGALGEGVKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +  +M+  +AD+ + + AA A  + +A + D  ++  ++AA   +       +  + A A
Sbjct: 282 EFQLMQGKLADMYVRMNAARAYVYAVAAACDRGETARKDAAGCIL-------YAAEAATA 334

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +  EA++ +GG+GY  +    R  R++    I  G+
Sbjct: 335 LALEAIQALGGNGYTNDFPAGRLLRDAKLYEIGAGT 370


>gi|322812415|pdb|3MXL|A Chain A, Crystal Structure Of Nitrososynthase From Micromonospora
           Carbonacea Var. Africana
 gi|322812416|pdb|3MXL|B Chain B, Crystal Structure Of Nitrososynthase From Micromonospora
           Carbonacea Var. Africana
 gi|322812417|pdb|3MXL|C Chain C, Crystal Structure Of Nitrososynthase From Micromonospora
           Carbonacea Var. Africana
 gi|322812418|pdb|3MXL|D Chain D, Crystal Structure Of Nitrososynthase From Micromonospora
           Carbonacea Var. Africana
          Length = 395

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 26/250 (10%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           D   + ++      G + LSG K  +S +P++  F + AQ     G  FL   ++   +P
Sbjct: 136 DAPGVVTELHSDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAP 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS- 326
            GL      + +G R++ T+E+ F      +  D  +  GPV   +  +     + S++ 
Sbjct: 196 -GLTVLDNWDGLGMRASGTLEVVFDRCP--VRADELLERGPVGARRDAVLAGQTVSSITM 252

Query: 327 -GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI----------ALDIAAATALSFR 375
            G+   +A+A      R ++ G    +    RA A            AL      AL+  
Sbjct: 253 LGIYAGIAQAA-----RDIAVGFCAGRGGEPRAGARALVAGLDTRLYALRTTVGAALTNA 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPI--TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A S D +    E     R+M P    K    ++APAV+ + +  +GG  Y     ++R 
Sbjct: 308 DAASVDLSGDPDERGR--RMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRL 365

Query: 434 YRESPANSIL 443
           YR+  A   +
Sbjct: 366 YRDVRAGGFM 375


>gi|294631987|ref|ZP_06710547.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835320|gb|EFF93669.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK------ 220
           TP +   W P +                S      L+E+  G+D AA+T +         
Sbjct: 95  TPALRARWLPAV-------------ADGSAVAAFALSERAAGSDAAALTLRADPDPSAGG 141

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL---- 275
            +   + L+G K W  ++P +D + + A+     G   +   L      GL    L    
Sbjct: 142 GAGRGWRLTGEKCWISNAPEADFYTVFARTAPGAGSRGITAFLVPADRPGLTGSALDMLS 201

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            + IG  +   V +   +  G       V+ G +   +  +   +  M+ + +  +LA  
Sbjct: 202 PHPIGALAFDGVPVTADDVLGEADRGFRVAMGTLNLFRPSVGAFAVGMAQAALEATLA-- 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYAR 394
            H A RR   GG L D   +   +A++AL   AA  + +  A ++D+ A      AA A+
Sbjct: 260 -HTA-RRDAFGGKLSDLQTVAHQVAEMALRTEAARLMVYAAATAYDDGAPGVPRRAAMAK 317

Query: 395 IMAPITKYWCCKMA 408
           ++A  T  +    A
Sbjct: 318 LLATETAQYVVDTA 331


>gi|261199998|ref|XP_002626400.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239594608|gb|EEQ77189.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 428

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 96/279 (34%), Gaps = 49/279 (17%)

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-------------DGIYCLSGHKWFLSSPMSDAFIML 246
            GLTE + G+D   + +  +                DG       KW   +      I+ 
Sbjct: 104 FGLTEPKHGSDATFMETAARPAQREYPAGSGAANAVDGFVINGAKKWQTGAHNCTHMIIF 163

Query: 247 AQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGF 297
           A+  G  G       FLVPR  E    N L Y+   N   + +   +E  F   S   G 
Sbjct: 164 ARTSGAPGSARGITAFLVPR--ETPGVNILSYEWTLNMPTDHATVALEDVFVPRSAVLGE 221

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVM 355
           L   L ++   V + +I      A  S    R  L +AI YA  R +   G  L D   +
Sbjct: 222 LDRGLAIAQTFVHENRI----RQAASSCGAARFCLDKAIEYANEREIWGKGKTLSDNQAI 277

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSR----------SEEAAYARIMAPIT----- 400
           +  + ++   +     L  R     D+  +             +  +  I   +T     
Sbjct: 278 QFQVVELMTQVEMLRLLILRTGWEMDQVTAECGGHIDSPVPGSKKPWVEIEKRLTHKVAM 337

Query: 401 -KYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
             +W  ++       A++  GG+GY   +    I RH+R
Sbjct: 338 CNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFR 376


>gi|319948075|ref|ZP_08022246.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319438263|gb|EFV93212.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 423

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 33/253 (13%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQ-------GQKISDGIYCLSGHKWFLSSPMSDAF 243
           + +  +  G+G +E   GTD+A++ ++       G+     +Y ++G K + S      +
Sbjct: 118 ISRGELHFGIGYSEPDSGTDLASLRTRAVREAGTGEYAGQDVYRINGQKMWTSLVAYADW 177

Query: 244 IML-------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT----VELEFS 292
           I L       A+    +   +VP   E     G  +  +    G  ++AT    V +  S
Sbjct: 178 IWLAARTDPDAKRHKGISMIVVPTTAE-----GFSWTPVHTMAGPDTSATYYQDVVVPAS 232

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-GILID 351
           N  G   G   + T  +   ++      A+ S   ++ SL + + +AR    +  G+  D
Sbjct: 233 NLVGPEHGGWPLMTNQLNHERV------ALTSAGPLQASLRQVVDWARTTPAADVGLPGD 286

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            PV++  I  +   +A   A++  LA    E  S ++ AA  RI A  TK +  + A   
Sbjct: 287 GPVIE--IEWVRAHLARVHAMAEYLALRNWEIVS-ADTAAPTRIAASATKVYGTETACEA 343

Query: 412 IAEAMECIGGSGY 424
               ME +G SGY
Sbjct: 344 YRLLMEVLGSSGY 356


>gi|240171971|ref|ZP_04750630.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium kansasii ATCC 12478]
          Length = 654

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + +    + DG  Y L G K W  +  +++  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARLAATATPVEDGKAYELEGLKLWTTNGVVAELLVVMARVPKSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + +K
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPAENLIGREGDGLK 281

Query: 314 I-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L++  +++  M     + SL  A  ++R R   G  +     +   IA IA    
Sbjct: 282 IALTTLNAGRLAIPAMVTGSCKWSLKIAREWSRERVQWGKPVGKHEAVAGKIAFIAATTY 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+        DE ++        RI A + K W  +M   +  E ++  GG GY   
Sbjct: 342 ALDAVVELSGQMADEGRND------IRIEAALAKLWSSEMTCRIADELLQIRGGRGYETA 395

Query: 428 RSI-ARHYRESPA---------NSILLGSGNAMVL 452
            S+ AR  R +P          N I  GS   M L
Sbjct: 396 ESLAARGERAAPVEQSLRDMRINRIFEGSSEIMRL 430


>gi|56477888|ref|YP_159477.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56313931|emb|CAI08576.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 35/261 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE------GRVG 254
           +TE   G+D  ++ +  ++  DG + ++G K F+S+ P++D  ++ A  E      G V 
Sbjct: 127 ITEPDSGSDSFSMRTHAERDRDG-WRINGTKTFISNGPVADVAVVFAVTEPAKGFHGGVT 185

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE- 310
            FLV    E  +P     Q+ + K+G R++   EL F++ +     +LG +   +     
Sbjct: 186 AFLV----ESDTPGFSAGQKFE-KLGLRTSPVGELVFTDMYVSPSAVLGQVGGGSAVFST 240

Query: 311 --DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             D +  + + S + ++  +   L  +I YAR R+  G  +     +   IAD+ + + A
Sbjct: 241 AMDWERCLLVASHVGTIERL---LETSISYARTRNQFGQAIGKFQAVAHKIADMKVQLEA 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYI 425
           A  L++R A   +  ++ S +AA A++M          ++ +++  A++ +   GG GY+
Sbjct: 298 ARLLAYRAAWRLENLRNASLDAAMAKLM----------VSESLLRTALDTVHLHGGYGYM 347

Query: 426 EERSIARHYRESPANSILLGS 446
            E  + R  R++  ++I  G+
Sbjct: 348 VEYEVERALRDAVGSTIYSGT 368


>gi|313229961|emb|CBY07666.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 24/260 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251
           L ++E   G+D+ ++  Q  K      Y ++G K W  + P+ D  ++ A+ +       
Sbjct: 153 LAMSEPGSGSDVMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSK 212

Query: 252 RVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
            +  F +  R LE     G     +  K+G R + T EL F N       +LG       
Sbjct: 213 SITAFAIDVRELE-----GFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGAEGKGAA 267

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     +  L  A  +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++
Sbjct: 268 VLMKGLNVERLTGAAGAVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLS 327

Query: 368 AATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A  A  + L  + D + K+ +     A +M      +  + A  V  EA++ +GG+GY  
Sbjct: 328 ATRAYLYALLKAADKDQKTLTNHDCAAVLM------YGAEQATKVSLEAIQILGGNGYTN 381

Query: 427 ERSIARHYRESPANSILLGS 446
                R  R+     I  G+
Sbjct: 382 AYPAERIMRDCKIGEIGAGT 401


>gi|260460954|ref|ZP_05809203.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032988|gb|EEW34250.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 387

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 26/260 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD-AFIMLAQVE------- 250
           L +TE   G+D+  + +   +  D  + L+G K F+S + ++D A   +A  E       
Sbjct: 123 LAMTEPGAGSDLRGMKATAVQDGDD-WVLNGTKHFISHADLADFAICFMASGEEETARGK 181

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306
             ++  F V     D    G   +     + +R      LEF +       +LG+++   
Sbjct: 182 RKKITAFFV-----DKGTKGFTVRDGYRNVSHRGYTNAILEFDDCRLPASQVLGEVHKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      L      +     +L  AI Y+ +R   G  +     +   +AD+A ++
Sbjct: 237 DVANSWLGATRLQVGATCLGRAERALGHAIEYSAQRQQFGQQIGKFQGVSFKLADMATEL 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + F     +D+     ++ A A++ A        +M   V  EA++  GG G ++
Sbjct: 297 KAADLMVFEAGWKYDQGTVTDQDMAMAKLKA-------TEMLAFVADEAIQIHGGMGLMD 349

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R +R++    I  G+
Sbjct: 350 DLPLERIWRDARVERIWEGT 369


>gi|254233760|ref|ZP_04927085.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis C]
 gi|124599289|gb|EAY58393.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis C]
          Length = 480

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ+ G+   F+V     + + +GL   +    +G R  
Sbjct: 266 YRLDGVKSLIPAAADAELFIVGAQLGGKPALFIV-----ESAASGLTV-KADPSMGIRGA 319

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E    S      LG+   S     +   L  L  A ++V      L   + Y ++
Sbjct: 320 ALGQVELCGVSVPLNARLGEDEASDNDYSEALALARLGWAALAVGTSHAVLDYVVPYVKQ 379

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ +     
Sbjct: 380 RQAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPFAREAALAKRLG---- 435

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG GY +E  + R YR+
Sbjct: 436 ---SDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 467


>gi|115399778|ref|XP_001215478.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191144|gb|EAU32844.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 453

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 19/252 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHK-WFLSSPMSDAFIMLAQ------VEG 251
            G+TE   G +   + +  +K  S   Y ++G K W   + ++   I+LA+      V+ 
Sbjct: 177 FGVTEPNTGLETLKLKTLARKNASQDAYSVTGQKIWITCAQVASKMILLARTTPLEDVKK 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
                 V  +  D +  GL  +R+K K+G R+    E+ F N   + +    +     E 
Sbjct: 237 STQGLSVFCIDLDRNKPGLDMRRIK-KMGGRAVDANEVWFDN---YQIPAKTLVGQEGEG 292

Query: 312 MKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +I+++ +++    ++G  + L       A  YA+ R V G  +     +   +AD  + 
Sbjct: 293 FRIILHGMNAERCLLAGEALGLGYAALERAAQYAKERVVFGRPIGQNQGIAHPLADAYMK 352

Query: 366 IAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           + AA   ++  A  FD +KS  S       +     KY   + A      A+   GG GY
Sbjct: 353 LEAAKLATYHAARLFDASKSDGSIPVQSVGVACNSAKYLAAEAAFTACERAVLSHGGMGY 412

Query: 425 IEERSIARHYRE 436
             E  + R+ RE
Sbjct: 413 AMEYDVERYLRE 424


>gi|294811795|ref|ZP_06770438.1| Acyl CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326440462|ref|ZP_08215196.1| glutaryl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294324394|gb|EFG06037.1| Acyl CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 397

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 19/249 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P       IG  GLTE   G+D A + +  ++  DG  + L+G K W  +  ++   ++ 
Sbjct: 131 PAMAAGEVIGCFGLTEPDHGSDPAGMRTHARR--DGSDWVLTGRKMWITNGSVAGVAVIW 188

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +  +  F VP         G     + +K   R++ T EL            L  + 
Sbjct: 189 ARTDEGIRGFAVPT-----ETPGFSAVDIPHKWSLRASVTSELVLDGVRLPADAVLPGAV 243

Query: 307 GPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    +  L +    I+  S+   R S A A+ YAR R   G  +    + +  +AD+A+
Sbjct: 244 GLRAPLSCLSHARYGIVWGSMGAARSSFAAALEYARTREQFGRPIGGFQLTQAKLADMAV 303

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++     L+  L    D  +   E+ ++ ++         C+ A  +       +G +G 
Sbjct: 304 ELHKGILLAHHLGVRMDAGRLLPEQVSFGKLNNVREAIDICRTARTI-------LGANGI 356

Query: 425 IEERSIARH 433
             E  + RH
Sbjct: 357 SLEYPVMRH 365


>gi|110680833|ref|YP_683840.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109456949|gb|ABG33154.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 381

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 28/259 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T  A+G   LTE   G+D A + ++  +  DG + L+G K F+S+  ++D  I+ A
Sbjct: 114 PRMATGEALGAFALTEPSAGSDPADMKTRATREGDG-WHLTGSKCFISNGGVADVLIVFA 172

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +       +  F++P+    G   G   + +  K G+  +  ++         LLG+ 
Sbjct: 173 VTDPTARHRGISAFILPKHTP-GFTAGPAEKTMGLKGGHVFSLALDCHLPAEA--LLGE- 228

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKR 357
              +G    MK+L   D+  + V+   + +A+A   A +     R + G  L  +  ++ 
Sbjct: 229 -EGSGFRTAMKVL---DNGRVEVAAQCIGMAQAALDAAKAYASDRVIGGEALSAKQGIRW 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ALD+  A  ++   A   D     SE AA A++ A        + A  V   A++
Sbjct: 285 MLADMALDLYGARLMALEAARQRDTGARFSEAAAMAKLKA-------SEAADRVADAALQ 337

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY  +  I R  R+
Sbjct: 338 IHGGYGYTRDFPIERLTRD 356


>gi|239981504|ref|ZP_04704028.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291453356|ref|ZP_06592746.1| acyl CoA dehydrogenase [Streptomyces albus J1074]
 gi|291356305|gb|EFE83207.1| acyl CoA dehydrogenase [Streptomyces albus J1074]
          Length = 381

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 121/292 (41%), Gaps = 36/292 (12%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    + W P              +   S+ +  G+TE   G++
Sbjct: 83  IVSPAICG-TVIARFGTEEQKRRWLPG-------------LADASLTMAFGITEPDAGSN 128

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPN 268
              IT+  ++  D  + L+G K F+S   ++DA +++ + E  R G       + D    
Sbjct: 129 SHRITTTARRDGDE-WVLNGRKVFVSGVDIADATLIVGRTEDARTGRLKPCLFIVDRDAP 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLD-----S 320
           G   + ++ +I + +    EL   +       L+GD +        +++   L+     +
Sbjct: 188 GFGRRHIEMEI-DAAEKQFELTLDDVRLPADRLVGDEDAGL-----LQLFAGLNPERVMT 241

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++   R +LA+A+ YA+ R V    +     +   +A   +++  A  +  R A  +
Sbjct: 242 AAFALGMGRYALAKAVTYAKERTVWKAPIGSHQAIAHPLAQAHIELELAKLMMQRAAALY 301

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           D         A     A + KY   +     + +A+  +GG+G   E  +AR
Sbjct: 302 DAGDDFGAGEA-----ANMAKYAAGEACVRAVDQAVHTLGGNGLTREYGLAR 348


>gi|15610275|ref|NP_217655.1| acyl-CoA dehydrogenase FADE24 [Mycobacterium tuberculosis H37Rv]
 gi|15842715|ref|NP_337752.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31794315|ref|NP_856808.1| acyl-CoA dehydrogenase FADE24 [Mycobacterium bovis AF2122/97]
 gi|121639022|ref|YP_979246.1| putative acyl-CoA dehydrogenase fadE24 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662994|ref|YP_001284517.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium tuberculosis H37Ra]
 gi|148824333|ref|YP_001289087.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis F11]
 gi|167970189|ref|ZP_02552466.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis H37Ra]
 gi|215405138|ref|ZP_03417319.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis 02_1987]
 gi|215413006|ref|ZP_03421707.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428594|ref|ZP_03426513.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T92]
 gi|215432098|ref|ZP_03430017.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis EAS054]
 gi|215447429|ref|ZP_03434181.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T85]
 gi|218754917|ref|ZP_03533713.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis GM 1503]
 gi|219559185|ref|ZP_03538261.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T17]
 gi|224991514|ref|YP_002646203.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800173|ref|YP_003033174.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 1435]
 gi|254365765|ref|ZP_04981810.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552230|ref|ZP_05142677.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260202285|ref|ZP_05769776.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T46]
 gi|260206478|ref|ZP_05773969.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis K85]
 gi|289444703|ref|ZP_06434447.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T46]
 gi|289555413|ref|ZP_06444623.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 605]
 gi|289571350|ref|ZP_06451577.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T17]
 gi|289575851|ref|ZP_06456078.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis K85]
 gi|289746948|ref|ZP_06506326.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis 02_1987]
 gi|289751815|ref|ZP_06511193.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T92]
 gi|289755258|ref|ZP_06514636.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis EAS054]
 gi|289759268|ref|ZP_06518646.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T85]
 gi|289763322|ref|ZP_06522700.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis GM 1503]
 gi|294993118|ref|ZP_06798809.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis 210]
 gi|297635782|ref|ZP_06953562.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 4207]
 gi|297732779|ref|ZP_06961897.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN R506]
 gi|298526613|ref|ZP_07014022.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777456|ref|ZP_07415793.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu001]
 gi|306782181|ref|ZP_07420518.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu002]
 gi|306786002|ref|ZP_07424324.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu003]
 gi|306790367|ref|ZP_07428689.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu004]
 gi|306794893|ref|ZP_07433195.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu005]
 gi|306799092|ref|ZP_07437394.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu006]
 gi|306804936|ref|ZP_07441604.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu008]
 gi|306809125|ref|ZP_07445793.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu007]
 gi|306969226|ref|ZP_07481887.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu009]
 gi|306973574|ref|ZP_07486235.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu010]
 gi|307081283|ref|ZP_07490453.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu011]
 gi|307085885|ref|ZP_07494998.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu012]
 gi|313660112|ref|ZP_07816992.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN
           V2475]
 gi|1781228|emb|CAB06276.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE24 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883036|gb|AAK47566.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619911|emb|CAD95255.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE24 [Mycobacterium bovis
           AF2122/97]
 gi|121494670|emb|CAL73151.1| Probable acyl-CoA dehydrogenase fadE24 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134151278|gb|EBA43323.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507146|gb|ABQ74955.1| acyl-CoA dehydrogenase FadE24 [Mycobacterium tuberculosis H37Ra]
 gi|148722860|gb|ABR07485.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis F11]
 gi|224774629|dbj|BAH27435.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321676|gb|ACT26279.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 1435]
 gi|289417622|gb|EFD14862.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T46]
 gi|289440045|gb|EFD22538.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 605]
 gi|289540282|gb|EFD44860.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis K85]
 gi|289545104|gb|EFD48752.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T17]
 gi|289687476|gb|EFD54964.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis 02_1987]
 gi|289692402|gb|EFD59831.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T92]
 gi|289695845|gb|EFD63274.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis EAS054]
 gi|289710828|gb|EFD74844.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis GM 1503]
 gi|289714832|gb|EFD78844.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis T85]
 gi|298496407|gb|EFI31701.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214168|gb|EFO73567.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu001]
 gi|308325143|gb|EFP13994.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu002]
 gi|308329359|gb|EFP18210.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu003]
 gi|308333188|gb|EFP22039.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu004]
 gi|308336679|gb|EFP25530.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu005]
 gi|308340519|gb|EFP29370.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu006]
 gi|308344459|gb|EFP33310.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu007]
 gi|308348455|gb|EFP37306.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu008]
 gi|308353085|gb|EFP41936.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu009]
 gi|308357058|gb|EFP45909.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu010]
 gi|308361012|gb|EFP49863.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu011]
 gi|308364621|gb|EFP53472.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis SUMu012]
 gi|323718227|gb|EGB27407.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis CDC1551A]
 gi|326902637|gb|EGE49570.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis W-148]
 gi|328459910|gb|AEB05333.1| acyl-CoA dehydrogenase fadE24 [Mycobacterium tuberculosis KZN 4207]
          Length = 468

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 17/215 (7%)

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L G K  + +   ++ FI+ AQ+ G+   F+V     + + +GL   +    +G R  
Sbjct: 254 YRLDGVKSLIPAAADAELFIVGAQLGGKPALFIV-----ESAASGLTV-KADPSMGIRGA 307

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           A  ++E    S      LG+   S     +   L  L  A ++V      L   + Y ++
Sbjct: 308 ALGQVELCGVSVPLNARLGEDEASDNDYSEALALARLGWAALAVGTSHAVLDYVVPYVKQ 367

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ +     
Sbjct: 368 RQAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPFAREAALAKRLG---- 423

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    +  + ++ +GG GY +E  + R YR+
Sbjct: 424 ---SDKGMQIGLDGVQLLGGHGYTKEHPVERWYRD 455


>gi|299534153|ref|ZP_07047504.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298717800|gb|EFI58806.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 393

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 32/257 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPMSDAFIMLA 247
           M    +   +G +E   G+D+A + +Q Q   D   G + ++G K + S   S  ++ LA
Sbjct: 114 MASGDIIFAIGYSEPGAGSDLAMLKTQAQLQGDLQTGHFVVNGQKLWTSGIESADYVWLA 173

Query: 248 QVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNAT----VELEFSNTFGFL 298
               R    L     +  ++ D    G  +  L   +GN + AT    VE+  +   G L
Sbjct: 174 ---ARTNQELARHKGISIMVVDTRDKGFSHT-LIQTVGNYTAATYFDNVEVPAARLIGEL 229

Query: 299 LGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            G   + T  +  E + +  + D              + + +A+ +   G   +DQ  ++
Sbjct: 230 NGGWKLITAQLNHERLGLGAWSDKVF-------APFVKVLQWAKAKDEQGRRAVDQAWVR 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           R++A+    + A    +FR+A S        E  A    +A  TK +  +    V+   M
Sbjct: 283 RSLAECYARLEAMRLTNFRIAASL-------EAGAMDVSLASATKVYGSEGVVEVLHRLM 335

Query: 417 ECIGGSGYIEERSIARH 433
           + +G S  +   S A +
Sbjct: 336 DIVGSSALVRGGSAASY 352


>gi|225679680|gb|EEH17964.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 488

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 100/279 (35%), Gaps = 49/279 (17%)

Query: 200 LGLTEKRGGTDIAAIT-------------SQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            GLTE + G+D   +              S      DG       KW   +      I+ 
Sbjct: 166 FGLTEPKHGSDATFMETIALPDHREYPAGSGPANAVDGFVINGAKKWQTGAHHCTHMIVF 225

Query: 247 AQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
           A+  G+ G       FLVPR  +    N + Y+   N   +  +ATV L+  + F     
Sbjct: 226 ARTSGQPGSSRGITAFLVPR--KTPGINVISYEWTFNMPTD--HATVGLD--DVFVPRSA 279

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVM 355
           +LG+L++     +       +  A  S    R  L ++I YA+ R V   G  L D   +
Sbjct: 280 ILGELDMGLAIAQTFVHENRIRQAASSCGAARFCLDKSIEYAKEREVWGKGKTLADNQAI 339

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP----------------I 399
           +  + ++   +     L  R +   D+  +       A +  P                +
Sbjct: 340 QFQVVELMTQVEMLRLLILRTSCEMDKITAECGGHGDAPVTGPKKPWVEIEKRLSDQVAM 399

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
             +W  ++       A++  GG+GY   +    I RH+R
Sbjct: 400 CNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFR 438


>gi|86739900|ref|YP_480300.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86566762|gb|ABD10571.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 381

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 49/296 (16%)

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
           + W P++ S E+              +G + +TE   G+D+ A+ +  ++  D  Y ++G
Sbjct: 110 QRWLPRLASGEF--------------VGAIAMTEPGTGSDLQAVRTTARREGDH-YVING 154

Query: 231 HKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K F+++    D  I++A+     G  G  L+  + E     G    R+  KIG     T
Sbjct: 155 AKTFITNGTHCDLLIIVARTGNAPGGRGLSLI--VAETQGLPGFERGRVLQKIGAMGTDT 212

Query: 287 VELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMSVSGMRVSLAE----- 334
            EL F+        D+ V      GP E    ++++  L    +S++    + AE     
Sbjct: 213 RELAFT--------DMRVPAVNLLGPAEGQGFVQLVQQLPQERLSIAVNAAAAAEHAVDL 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  L++    +  +A+   +   A AL   + +   E  +   + A   
Sbjct: 265 AIAYAKERTAFGKPLLEFQNTRFVLAECRTE---ALALRTFIDHCITEHVAGRLDGA--- 318

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A + KY        ++   ++  GG GY+ E  IAR Y  +    I  G+   M
Sbjct: 319 -TASMAKYLATDKQCEIVDRCLQIFGGYGYMTEYPIARMYAAARVQRIYGGTNEIM 373


>gi|238062698|ref|ZP_04607407.1| nitrososynthase [Micromonospora sp. ATCC 39149]
 gi|237884509|gb|EEP73337.1| nitrososynthase [Micromonospora sp. ATCC 39149]
          Length = 421

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 26/250 (10%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           D   + ++      G + LSG K  +S +P++  F + AQ     G  FL   ++   +P
Sbjct: 145 DAPGVVTELHSDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAP 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS- 326
            GL      + +G R++ T+E+ F      +  D  +  GPV   +  +     + S++ 
Sbjct: 205 -GLTVLDNWDGLGMRASGTLEVVFDRCP--VRADELLERGPVGARRDAVLAGQTVSSITM 261

Query: 327 -GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI----------ALDIAAATALSFR 375
            G+   +A+A      R ++ G    +    RA A            AL      AL+  
Sbjct: 262 LGIYAGIAQAA-----RDIAVGFCAGRGGEPRAGARALVAGLDTRLYALRTTVGAALTNA 316

Query: 376 LANSFDEAKSRSEEAAYARIMAPI--TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A S D +    E     R+M P    K    ++APAV+ + +  +GG  Y     ++R 
Sbjct: 317 DAASVDLSGDPDERGR--RMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRL 374

Query: 434 YRESPANSIL 443
           YR+  A   +
Sbjct: 375 YRDVRAGGFM 384


>gi|159035815|ref|YP_001535068.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157914650|gb|ABV96077.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 404

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 126/307 (41%), Gaps = 51/307 (16%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG 224
           TP    +W P+ F     PT  A             +E   G+D+ AI ++    + +D 
Sbjct: 104 TPEQLLEWVPQCFGDLDSPTVAA----------FCTSEPEAGSDVGAIRTRAVYDQATDE 153

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + L+G K + ++  ++   ++ A V+  +G      F+VP         GL   R   K
Sbjct: 154 -WVLNGQKAYATNGGIAGVHVVTASVDPELGSRGQAAFVVPP-----GTAGLTATRKLRK 207

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI----------------LIYLDSAI 322
           +G R++ T ++   +    L G   +      D ++                   L    
Sbjct: 208 LGLRASHTADVFLDDVR--LPGRCLLGGKEALDERLARARSGQRAASQAAMRTFELSRPT 265

Query: 323 MSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +    + V+ A    A+ YA+ R   G  +I+   +   +AD+ ++I AA  L +R   S
Sbjct: 266 VGAQALGVARAAYEYALDYAKERVQFGRPIIENQAVAFTLADMKMEIDAARLLVWR--AS 323

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +    +R   A        ++K    ++A  V  +A++ +GG+G++ +  + R YR++  
Sbjct: 324 WMGRNNRPFTAG----EGSMSKLKAGEVAVTVTEKAVQLLGGAGFLRDHPVERWYRDAKI 379

Query: 440 NSILLGS 446
            +I  G+
Sbjct: 380 YTIFEGT 386


>gi|183980486|ref|YP_001848777.1| acyl-CoA dehydrogenase FadE3_2 [Mycobacterium marinum M]
 gi|183173812|gb|ACC38922.1| acyl-CoA dehydrogenase FadE3_2 [Mycobacterium marinum M]
          Length = 390

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 29/262 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + LTE  GG+D+  +++           ++G K ++S+      I L     +      P
Sbjct: 127 MALTEPGGGSDLQNMSTTAMADGPDQLLITGAKTWISNARRSGLIALLC---KTDPHATP 183

Query: 260 R-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308
           R       L+E G   GL       K+G +     EL F N    T   L G      G 
Sbjct: 184 RHHGISIVLVEPGP--GLNISADLPKLGYKGVEACELSFDNYRAPTSAILGG--QPGQGF 239

Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + MK L    +  A  ++     +L +A+ YA++RH  G  +     +   +AD+A  +
Sbjct: 240 SQMMKGLETGRIQVAARALGVASAALDDALAYAQQRHSFGQPIWKHQAIGNYLADMATKL 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+   A  +D  +    EA  A++ A  T       A  +   A+   GG GY  
Sbjct: 300 TAARQLTHYAAQRYDSGQRCDMEAGMAKLFASET-------AMEIALNAVRIHGGYGYST 352

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R++R++P   +++G G 
Sbjct: 353 EYDVERYFRDAPL--MIVGEGT 372


>gi|269955031|ref|YP_003324820.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269303712|gb|ACZ29262.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 414

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 23/256 (8%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIM 245
           PM +  V     LTE   G+D  ++ T+  + + DG+  Y ++G K W          ++
Sbjct: 140 PMARGDVLGAFALTEPTHGSDSVSLETTAVRTVRDGVEGYAINGEKKWIGFGSCGHITVV 199

Query: 246 LAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            A++ G  G      F+VP+       +G     ++ K+  R+     +   + F  L  
Sbjct: 200 WARLVGDAGDSQVHGFIVPQ-----DADGYRATTIEGKVALRAITQAHIVLDDVFVPLDA 254

Query: 301 DLNVSTGPVEDMKILIYLDSAIM-SVSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRA 358
            L  +T      ++L     A+  S  G  ++  EA + Y  +R   G  L    +++  
Sbjct: 255 ALPGATSFKATSQVLFATRLAVAWSAVGHAIACYEAALEYVGQRVQFGRPLAASQLVQER 314

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +  +   I+    L  RL          +E        A + KY C + A  V A A + 
Sbjct: 315 LTRMLSTISQLQLLVARLTRV-------AEAGGLTGAQASLAKYSCTRGAREVAALARDM 367

Query: 419 IGGSGYIEERSIARHY 434
           +GG+G +    +ARH+
Sbjct: 368 LGGNGILLANRVARHF 383


>gi|121605026|ref|YP_982355.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593995|gb|ABM37434.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 385

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 25/290 (8%)

Query: 177 KIFSREYDPTNKAP----MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +I S+  +P    P    + +      + LTE RGG+D A +  + ++  D  Y ++G K
Sbjct: 97  QILSKYGNPEVVKPWLHKLTQGEAICAIALTEPRGGSDAANLRLRIERDGDE-YVINGEK 155

Query: 233 WFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +S+   +D  ++  +  +   G   V  LL      GL   R     G R+     + 
Sbjct: 156 TSISAADQADITVVFGRTGKPEDGAHGVTALLVPMDLPGLSTNRFDCH-GQRAIGRGSIF 214

Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVS 345
           F N        LGD N   G V+ M    +  S I    ++  RV+L E   Y  +R   
Sbjct: 215 FENVRVPVSHRLGDEN--KGFVQVMHGFDFSRSLIGLQVLAVARVALDETWEYITQRQAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L     +   +A    ++  A  L  +     D+    + EA  A       K+W  
Sbjct: 273 GQPLSSFQGVTHPLAQFDTEVEGARLLCLQGLWLKDKGLPHTAEAGMA-------KWWGP 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           K+A  VI + + C G  GY  +R +    R        +G G A ++  +
Sbjct: 326 KLAYDVIHQCLLCFGHGGY--DRGLMEQ-RLRDVLGFQIGDGTAQIMKTV 372


>gi|301062225|ref|ZP_07202902.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300443657|gb|EFK07745.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 300

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 19/210 (9%)

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
           + CF+V R        G+  + L   +G R      L F++       LLG+LN      
Sbjct: 70  ISCFIVDR------SEGVKTEYLYGLMGCRGGGASRLVFNDVKVPRENLLGELNQGAKIF 123

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA-A 368
             M I   L +A M++     ++  A  Y  +R   G     +PV   A   ++  +A A
Sbjct: 124 NTMMIPERLGTAAMTIGAAIPAVDVATGYTTKRKAFG-----RPVA--AFQGVSFQVAEA 176

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            T L    +  +  A++  E+    RI  +   +K +  +     +  AM+ +GG GY  
Sbjct: 177 VTLLDASRSMIYTTARAVDEQIDEKRIRRLVSQSKKFVTESCQKAVHNAMQVMGGIGYTN 236

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
              + R  R+    SI  G+   M + + N
Sbjct: 237 IYPVERILRDLRLASIWTGTNEVMSVIIAN 266


>gi|194740183|gb|ACF94630.1| nitrososynthase [Micromonospora sp. ATCC 39149]
          Length = 412

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 26/250 (10%)

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           D   + ++      G + LSG K  +S +P++  F + AQ     G  FL   ++   +P
Sbjct: 136 DAPGVVTELHSDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAP 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS- 326
            GL      + +G R++ T+E+ F      +  D  +  GPV   +  +     + S++ 
Sbjct: 196 -GLTVLDNWDGLGMRASGTLEVVFDRCP--VRADELLERGPVGARRDAVLAGQTVSSITM 252

Query: 327 -GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI----------ALDIAAATALSFR 375
            G+   +A+A      R ++ G    +    RA A            AL      AL+  
Sbjct: 253 LGIYAGIAQAA-----RDIAVGFCAGRGGEPRAGARALVAGLDTRLYALRTTVGAALTNA 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPI--TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A S D +    E     R+M P    K    ++APAV+ + +  +GG  Y     ++R 
Sbjct: 308 DAASVDLSGDPDERGR--RMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRL 365

Query: 434 YRESPANSIL 443
           YR+  A   +
Sbjct: 366 YRDVRAGGFM 375


>gi|163734821|ref|ZP_02142259.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161391926|gb|EDQ16257.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 381

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 28/259 (10%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
           P   T  A+G   LTE   G+D A + ++  +  DG + L G K F+S+  ++D  I+ A
Sbjct: 114 PKVATGEALGAFALTEPSAGSDPAYMKTRATREGDG-WHLRGSKCFISNGGVADILIVFA 172

Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +       +  F++P+    G   G   + +  K G+  + T++         LLG+ 
Sbjct: 173 VTDPAARHRGISAFILPKHTP-GFTAGPAEKTMGLKGGHVFSLTLDCHLPAEA--LLGEK 229

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKR 357
              +G    MK+L   D+  + V+   + +A+A   A +     R + G  L  +  ++ 
Sbjct: 230 G--SGFRTAMKVL---DNGRVEVAAQCIGMAQAALNAAKAYASDRVIGGEALSAKQGIRW 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ALD+  A  ++   A   D     SE AA A++ A        + A  V   A++
Sbjct: 285 MLADMALDLYGARLMALEAARQRDTGARFSEAAAMAKLKA-------SEAADRVADAALQ 337

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY  +  I R  R+
Sbjct: 338 IHGGYGYTRDFPIERLTRD 356


>gi|116254816|ref|YP_770652.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259464|emb|CAK10602.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 386

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 28/261 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQ--------- 248
           L +TE   G+D+  +    ++  DG  + L+G K F+S + ++D  I+ A          
Sbjct: 122 LAITEPDAGSDMRGMKCAARR--DGSDFVLNGTKHFISHADVADFVIVFAATGEEETPKG 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
           ++ ++  FLV R    G+P G    +  + + +R      L F++       +LG+++  
Sbjct: 180 IKKKITAFLVDR----GTP-GFEILKGYDSVSHRGYHNSTLSFTDCRIPGSQVLGEVHRG 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       L  A   V   R      + YA  R   G  +     +   +AD+  +
Sbjct: 235 FEIANQWLYGTRLTVAATCVGRARRVFDMTLPYAAERKQFGKPIGANQGVSFKLADMITE 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+   A   D   S   + A A       K +  +M   V  EA++  GG G +
Sbjct: 295 IDAADWLTLAAAWRLDAGLSADRQIASA-------KLYSSEMLARVTDEAIQIFGGMGLM 347

Query: 426 EERSIARHYRESPANSILLGS 446
           ++  +AR +R++    I  G+
Sbjct: 348 DDLPLARFWRDARVERIWDGT 368


>gi|54025350|ref|YP_119592.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54016858|dbj|BAD58228.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 383

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251
           +G++E   G+D+AA+ ++  +  DG + LSG K W   + ++ A ++LA+ +G
Sbjct: 129 IGMSEPDAGSDLAAVRTKATEHPDGSWTLSGTKVWTTGAHVAHAMVLLARTDG 181


>gi|240278081|gb|EER41588.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 367

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           L +TE   G+D+A I +  +K  DG  Y ++G  KW  +   +D F+   + +      L
Sbjct: 234 LAVTEAFAGSDVAGIRTTAEKTPDGKHYIINGTKKWITNGMWADYFVTACRTDKGYSVIL 293

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +PR       N +  +R+K      + AT  ++F N
Sbjct: 294 IPR------DNNVETKRIKTSYSTAA-ATAFIQFDN 322


>gi|218516850|ref|ZP_03513690.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
          Length = 283

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 32/164 (19%)

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++P++T  ++ A+ T  +  + + +  K+ S E+  T             + LTE   G+
Sbjct: 123 LAPTLTMGAIEAVHTHGSAALKETYLEKMVSGEWTGT-------------MNLTEPHAGS 169

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258
           D+ A+ ++ ++  DG Y + G K F++    DA      ++LA++         +  FLV
Sbjct: 170 DVGALKARAERRPDGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLV 229

Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT-FG 296
           P+ L  +DGS    N L    L++K+G   + T  + + +  FG
Sbjct: 230 PKFLVNDDGSLGPRNDLFCHSLEHKLGIHGSPTCTMIYGDAGFG 273


>gi|84517011|ref|ZP_01004368.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84509129|gb|EAQ05589.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 506

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 131/341 (38%), Gaps = 15/341 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEGRVGC 255
           LTE + G+D++AI  + +   DG + ++G K F+S    D        ++        G 
Sbjct: 158 LTEAQAGSDLSAIRCRAENTGDG-WRITGEKIFISGGDQDMSAEILHLVLARSSAANAGM 216

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   +    P+ +   R++ K+G  ++ T +L F      L+G        +  +   
Sbjct: 217 NGLSLYMCPAQPD-VSVTRIEEKMGLHASPTCQLRFDGAKAELIGTEGQGLQAMFTLMNH 275

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATALS 373
             +D A+  V+    +   A  YA +R + G      P +    AD+   LD     AL 
Sbjct: 276 ARIDVALQGVAHASRAADIAAAYAAQR-IQGRQPHGSPALLNQHADVQRMLDDQRHLALG 334

Query: 374 FR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            R + +    A   ++  A    + P+ K +C +         ++ +GG GY+ E  + +
Sbjct: 335 ARAMCHIALVAVETADSPALCDFLTPLCKVFCSEAGIRAADLGIQILGGYGYLNEYGLEQ 394

Query: 433 HYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            +R++   +I  G+       +    L  G    E  F+ L  DL      V+  L D  
Sbjct: 395 IWRDARICAIYEGANGIHERSIATRGLRAGGGADE--FADLVTDLAHGSAPVLQRLADWQ 452

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
            L       +  L +  A A   A L+ A      D   EN
Sbjct: 453 ILRSAMSQTSDPLPQAHAFAQQTANLFFAAAWARIDAVAEN 493


>gi|326332365|ref|ZP_08198644.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325949854|gb|EGD41915.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 390

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 33/260 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L+E   G+D A    + + + DG  + L+G K W  ++ +S  + +LA  +       + 
Sbjct: 129 LSEPDAGSDAA--NQKTRAVRDGDFWVLNGVKRWITNAGVSGYYTVLAVTDPEKRSKGIS 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + + S  G+ +   + K+G + + T E+ F N       L+G         E+ K   
Sbjct: 187 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRLIG---------EEGKGFT 237

Query: 317 Y----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           Y    LD   ++++   V +A+     A+ Y + R   G  + +   ++  +AD+ + I 
Sbjct: 238 YAMQTLDHTRITIAAQAVGVAQGALDYALGYIKERKQFGKPIAEFQGVEFMVADMGMKIE 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L++        A  RSE             K +   +A  V  +A++ +GG G+  
Sbjct: 298 AARQLTY-------AAAGRSERGDKDLTFFGAAAKAFASDVAMQVTTDAVQLLGGYGFTR 350

Query: 427 ERSIARHYRESPANSILLGS 446
           +  + R  R++    I  G+
Sbjct: 351 DYPVERMMRDAKITQIYEGT 370


>gi|319777953|ref|YP_004134383.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171672|gb|ADV15209.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 382

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEG 251
            G+TE   GTD  A+ +      D  + + G K W   +  SD  ++LA+       ++ 
Sbjct: 117 FGVTEPTSGTDTGALKTTAHLDGDH-FVVKGQKIWTSRAEHSDLMLLLARTTPLKDGMKK 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
             G  ++   + +    GL  + ++  +   ++AT E+ F +               F +
Sbjct: 176 TDGLSVLIVDMREAVGKGLTIRPIRTMM---NHATTEVFFDDLRMPAENLIGEEGKGFRY 232

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   V   +  + ++  YA+ RHV G  +     ++ 
Sbjct: 233 ILSGMNAE-------RILI----AAECVGDAKWFIEKSSVYAKERHVFGRAIGQNQGIQF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +     N ++  K+   EA  A+++A          A A    A  
Sbjct: 282 PIARAYANMRAAELMVREALNLYEAGKNPGAEANMAKMLA----------ADASNEAANV 331

Query: 418 CI---GGSGYIEERSIARHYRES 437
           CI   GG G+ EE  + R +RE+
Sbjct: 332 CIQTHGGFGFAEEYDVERKFRET 354


>gi|226291419|gb|EEH46847.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb18]
          Length = 481

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 100/279 (35%), Gaps = 49/279 (17%)

Query: 200 LGLTEKRGGTDIAAIT-------------SQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            GLTE + G+D   +              S      DG       KW   +      I+ 
Sbjct: 159 FGLTEPKHGSDATFMETIALPDRREYPAGSGPANAVDGFVINGAKKWQTGAHHCTHMIVF 218

Query: 247 AQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
           A+  G+ G       FLVPR  +    N + Y+   N   +  +ATV L+  + F     
Sbjct: 219 ARTSGQPGSSRGITAFLVPR--KTPGINLISYEWTFNMPTD--HATVGLD--DVFVPRSA 272

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQPVM 355
           +LG+L++     +       +  A  S    R  L ++I YA+ R V   G  L D   +
Sbjct: 273 ILGELDMGLAIAQTFVHENRIRQAASSCGAARFCLDKSIEYAKEREVWGKGKTLADNQAI 332

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP----------------I 399
           +  + ++   +     L  R +   D+  +       A +  P                +
Sbjct: 333 QFQVVELMTQVEMLRLLILRTSCEMDKITAECGGHGDAPVTGPKKPWVEIEKRLSDQVAM 392

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
             +W  ++       A++  GG+GY   +    I RH+R
Sbjct: 393 CNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFR 431


>gi|39936352|ref|NP_948628.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192292080|ref|YP_001992685.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39650207|emb|CAE28730.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192285829|gb|ACF02210.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 410

 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 47/251 (18%)

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV----------GCFLV 258
           +D   I ++ +K  D  Y ++G KW+ SS + D    +A V G+              LV
Sbjct: 149 SDATNIETRIEKDGDH-YVINGRKWW-SSGVGDPRCKIAIVMGKTDPNAARHQQQSQILV 206

Query: 259 P---------RLLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           P         ++L     D +P+G    +L+N     SN    L      GF +    + 
Sbjct: 207 PLDTPGITIEKMLPVFGFDDAPHGHGMVKLENVRVPASN----LLLGEGRGFEIAQGRLG 262

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +            + ++     +L + +   + R   G  +I+  V ++ IA+  +D
Sbjct: 263 PGRIH---------HCMRTIGKAEEALEKMVKRLQSRVAFGKRIIEFSVWEQRIAEARID 313

Query: 366 IAAATALSFRLANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           I     L  + A+  D+  +++   E A  ++ AP       +MA  +I EA++  GG+G
Sbjct: 314 IEMNRLLCLKAADMMDKVGNKTAQLEIAMIKVAAP-------RMAQRIIDEAIQAFGGAG 366

Query: 424 YIEERSIARHY 434
             ++  +A+ Y
Sbjct: 367 VSDDAGLAKDY 377


>gi|317125508|ref|YP_004099620.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589596|gb|ADU48893.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 442

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 17/119 (14%)

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSR 386
           L + + Y   RH  G     +P+ +R     ++AD+A+++A    + +R A   DE K  
Sbjct: 332 LDQLVPYVTTRHAFG-----EPIARRQAVAFSVADVAIELAGLRLVVWRAAARLDEGKDA 386

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +   A AR +         +    + ++A++ +GG G+++E    R YR+     +L G
Sbjct: 387 ALLIANARQL-------TARHGAQIGSQAVQLLGGHGFVKEFDNERWYRDLRGAGLLEG 438


>gi|307169232|gb|EFN62023.1| Acyl-CoA dehydrogenase family member 9, mitochondrial [Camponotus
           floridanus]
          Length = 627

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 63/339 (18%), Positives = 130/339 (38%), Gaps = 43/339 (12%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +++   +    +++ M +      + PKI + E  PT             +  TE   
Sbjct: 151 GSYIVKNHIMPVHIISTMASEEQKAKYLPKIATGEIVPT-------------ICYTESDS 197

Query: 208 GTDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRL 261
           G +   I S       D  Y L+G K F+++       ++    G       G   +   
Sbjct: 198 GINFNNIKSMTILSDCDTFYTLNGEKLFVANGHDSNLFLVFSRSGHSQAISSGQSTLSVF 257

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI-Y 317
           L D   NG+ Y+ +KN +G  +++T  + F +T      +LG+  +++G    M ILI  
Sbjct: 258 LVDSDMNGITYKDIKNLVGLHNSSTCTVAFKDTIIPKDHVLGE--ITSG----MSILIDS 311

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372
           L     +++   + + +       RHV     +D+ +     ++  I  I+  + +  ++
Sbjct: 312 LAPGNRNLAPQTIGILKTFIRLLTRHVLERKHLDENMHEYESVQEVIGKISTALYSMESI 371

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +      D  +++        +   + + +C       I E ++ IG   Y+ E+   +
Sbjct: 372 LYFTTGIMDMYENQD-----CTLEKAMVEMYCVNECITRIYEGLQIIGARSYLTEKPYIQ 426

Query: 433 HYRESPANSILLGSGNA---MVLDVLNLLEKGTNLFEQL 468
              E   +  L  S N    M + +L L   G NL + +
Sbjct: 427 -ILEDALSYTLFDSYNIDSNMYISLLGLQHMGKNLHQHI 464


>gi|224170985|ref|XP_002339446.1| predicted protein [Populus trichocarpa]
 gi|222875126|gb|EEF12257.1| predicted protein [Populus trichocarpa]
          Length = 275

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 23/188 (12%)

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GI-----------LIDQPVM 355
           + + +I I + + ++ ++G   SL  A    + R + G  G+           +I+   +
Sbjct: 5   MNEARISIGMAATMLGLAGYHASLEYAQSRPQGRPIKGAPGVAGKDATRPQSRIIEHADV 64

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYAR----IMAPITKYWCCKMAPA 410
           KR +         A AL+   A   DE  + + E+ A AR    ++ PI+K W  +    
Sbjct: 65  KRMLLAQKSYCEGALALNLFCARLVDEQHTGTPESVAEARLLLEVLTPISKSWPSEFCLE 124

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQ 467
             + A++  GG GY  +  + +++R++  N I  G+     +D+L    L++ G  L  Q
Sbjct: 125 ANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVLMDGGKGL--Q 182

Query: 468 LFSTLEQD 475
           L +T   D
Sbjct: 183 LLATRIND 190


>gi|114797288|ref|YP_761370.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114737462|gb|ABI75587.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 117/297 (39%), Gaps = 68/297 (22%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P + ++  PKI S E         +K   A+    TE   G D +++ ++ ++ + G Y 
Sbjct: 107 PELKRESLPKIISGE---------EKMCFAV----TEPNSGLDTSSLETKAERTNTG-YM 152

Query: 228 LSGHK-WFLSSPMSDAFIMLAQVEGRVGCF---------------------LVPRLLEDG 265
           + G K W   +  +D  +++A+   +  C                      ++P++    
Sbjct: 153 IHGRKIWTTGAQRADKILIIARTTPKDQCAKPYMGLSLFYTDLNRNKIEANVIPKMGRKA 212

Query: 266 SP-NGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              N L    L+    + IGN  +          F +LL  LN         ++L  ++S
Sbjct: 213 VECNTLFIDGLEVPKEHLIGNEGDG---------FKYLLQGLNPE-------RVLFAVES 256

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             +  +    +L  A  YA  R V G  +     +   +A    +++AA  L+++ A+ +
Sbjct: 257 VGLGFA----ALERATRYANERVVFGRPIGQNQGIAHPLAKSWAELSAAELLAYKAASLY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D  +    EA  A+ +     +  C+ A  V+       GG GY +E  + R  RE+
Sbjct: 313 DAGQDCGAEANAAKYLGTEAGFTACETA--VLTH-----GGMGYAKEYHVERMMREA 362


>gi|316933495|ref|YP_004108477.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315601209|gb|ADU43744.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 410

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 47/251 (18%)

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV----------GCFLV 258
           +D   I ++ +K  D  Y ++G KW+ SS + D    +A V G+              LV
Sbjct: 149 SDATNIETRIEKDGDH-YVINGRKWW-SSGVGDPRCKIAIVMGKTDPNAARHQQQSQILV 206

Query: 259 P---------RLLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           P         ++L     D +P+G    +L+N     SN    L      GF +    + 
Sbjct: 207 PLDTPGITIEKMLPVFGFDDAPHGHGMVKLENVRVPASN----LLLGEGRGFEIAQGRLG 262

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            G +            + ++     +L + +   + R   G  +I+  V ++ IA+  +D
Sbjct: 263 PGRIH---------HCMRTIGKAEEALEKMVKRLQSRVAFGKRIIEFSVWEQRIAEARID 313

Query: 366 IAAATALSFRLANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           I     L  + A+  D+  +++   E A  ++ AP       +MA  +I EA++  GG+G
Sbjct: 314 IEMNRLLCLKAADMMDKVGNKTAQLEIAMIKVAAP-------RMAQRIIDEAIQAFGGAG 366

Query: 424 YIEERSIARHY 434
             ++  +A+ Y
Sbjct: 367 VSDDAGLAKDY 377


>gi|186952734|gb|ABA39084.2| acyl ACP dehydrogenase [Streptomyces albus]
          Length = 366

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 19/279 (6%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           W  + F      T +     +     +  +E + G+D++AI +      D +  L+GHK 
Sbjct: 84  WTIQRFGTRRQRTEELTRLTSGGLAAVAFSEPQAGSDLSAIATTIVDDGDEVV-LNGHKV 142

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++  +D  I+  + +      +VP         G+  + +   +G R+    +++  
Sbjct: 143 WSTAAAYADVVIVFGRYQDGAAAVVVPT-----DAPGVTVRPVAQPLGCRAAGHADVDLD 197

Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           +     G +L   + S G +  +  L Y  L  A   V  +R  L  A  +AR R   G 
Sbjct: 198 DVRLPAGRVLSGASQSPGLLTTIA-LTYGRLSVAWGCVGIIRGCLRAAATHARHREQFGK 256

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++ R ++++ +    AT +    ++ +D   S S E + A ++A   K+     
Sbjct: 257 PLAQHQLVARHLSELLVAEQTATRVCEHASDCWD---SGSPELSGAAVLA---KHVSAGR 310

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A    A A++ +  +G ++   +AR YR++    I+ GS
Sbjct: 311 AAHAAATAVQVLASAGSVDGEPVARAYRDAKLMQIIEGS 349


>gi|54024059|ref|YP_118301.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015567|dbj|BAD56937.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 418

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 38/248 (15%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEG--------RVGCFLVPRLLEDGSPNGLCYQRLK 276
           Y L+GHK F+++ P +D  ++ A+++         +V  F++ + +E     GL   +  
Sbjct: 177 YLLTGHKTFITNGPYADIIVVYAKLDEPGVDRRDRKVLTFVLDKGME-----GLTQSKPF 231

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--- 333
            K+G  ++ T EL F N     LG   +  G  ED +     DSA  + +  R+ +A   
Sbjct: 232 KKMGLHASPTGELFFDNV---RLGRDRL-LGETEDHRGGDGRDSARANFTTERIGVAFMA 287

Query: 334 ---------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                      I YA+ R + G     Q + +  +  + L +A        + N      
Sbjct: 288 LGIIAECHRLCIDYAKNRRLWG-----QEIGRFQL--VQLKLATMEIARINVQNMVFSTL 340

Query: 385 SRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            R+       +  A   K +  + A  V  EA++  GG+GY+ E  + +  R++ +  I 
Sbjct: 341 ERARAGKLPTLAEASAMKLYAAQAATEVAMEAVQLFGGNGYMSEYRVEQLARDAKSLMIY 400

Query: 444 LGSGNAMV 451
            GS    V
Sbjct: 401 AGSNEIQV 408


>gi|323508246|emb|CBQ68117.1| related to Acyl-CoA dehydrogenase [Sporisorium reilianum]
          Length = 403

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 66/303 (21%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP  H DW PK             M    +    G+TE   G++   + ++  +  D  Y
Sbjct: 105 TPEQHADWLPK-------------MIDGRIRSCFGITEPTTGSETLKLKTKAVRKGDK-Y 150

Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGC-------FLVPRLLEDGSPN--------- 268
            ++G K W  S+ ++   ++LA+  E   G        F  P      +P          
Sbjct: 151 VVNGSKIWTSSAQVASHMVLLARTSEPEAGSRSSGLSLFFAPLRSVPNTPQNAGKAELAR 210

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN--------------TFGFLLGDLNVSTGPVEDMKI 314
           G+  +++    GN  +A  E+ F +               F ++L  +N         + 
Sbjct: 211 GVEMRKIAKMGGNTVDAN-EVWFDDFEVPADCLIGEEGRGFKYVLHGMNAE-------RC 262

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L+  ++     + +R    +A+ YA  R V G  +     ++  +A     + AA  L++
Sbjct: 263 LLAGEALGTGYAALR----KAVKYAGDRVVFGKPIGAMQAIQHPLAKSWAQLEAARHLTY 318

Query: 375 RLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +D+ A     +A  A+ MA    Y  C+ A       +  +GG GY +E  + R 
Sbjct: 319 AAARMYDDRAPDAGAQANAAKYMAAEAGYSACETA-------VMTLGGMGYAKEFHVERL 371

Query: 434 YRE 436
           +RE
Sbjct: 372 FRE 374


>gi|238613418|ref|XP_002398435.1| hypothetical protein MPER_00969 [Moniliophthora perniciosa FA553]
 gi|215474972|gb|EEB99365.1| hypothetical protein MPER_00969 [Moniliophthora perniciosa FA553]
          Length = 256

 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   IG  GLTE   G+D A++ +  +++ DG + L+G K W  +
Sbjct: 48  FGSEAQKEXYIPRLATGELIGAFGLTEPNHGSDPASMQTTAEEV-DGGFILNGSKAWISN 106

Query: 237 SPMSDAFIML--AQVEGRVGCFLVPRLLEDGS 266
           +P++D F++    + + +V  FLV ++ +  S
Sbjct: 107 APVADIFVIWHXCKWDNKVRGFLVEKVTQRSS 138


>gi|296139054|ref|YP_003646297.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027188|gb|ADG77958.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 389

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 24/265 (9%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           WA +   + + P     M    V    GLTE   G+D AA+ ++ ++  DG  + + G K
Sbjct: 112 WASEAEKQRWLPG----MAAGEVVGCFGLTEPDHGSDPAAMRTRARR--DGADWVIDGRK 165

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D  ++ AQ +  +  F VP         G     +K+K+  R++ T EL  
Sbjct: 166 MWITNGSVADVAVIWAQTDDGIRGFAVPT-----ETPGFTANTIKHKMSLRASVTSELVL 220

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                       ++    GP+  +    Y      ++   R ++  A  YA  R   G  
Sbjct: 221 DGVRVPESAAFPEVRGLRGPLSCLSEARY-GIVWGAMGSARTAIECAQRYAVEREQFGRP 279

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    + ++ +AD++L+      L+  L    D    R E+ +  ++         C+ A
Sbjct: 280 IGGFQLTQQKLADMSLEYVKGILLALHLGRLKDATGLRPEQVSLGKLNNVREAIEICRTA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433
             +       +G +G   E  + RH
Sbjct: 340 RTI-------LGANGISLEYPVIRH 357


>gi|269956889|ref|YP_003326678.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305570|gb|ACZ31120.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 394

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 9/120 (7%)

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA+ YA  R V G  +     +   +A +   + AA    F  A           EA+
Sbjct: 271 LEEALRYAGERTVFGASIGSHQHVAFTLARMQARVHAARTSWFDAAQKLVHGLPSKAEAS 330

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+++A        + A A   +A +  GG G++ E  +ARHYR+S    + +G G + V
Sbjct: 331 VAKLVA-------SEAAMANARDATQIFGGYGFMNETPVARHYRDS--KVLEIGEGTSEV 381


>gi|332851541|ref|ZP_08433518.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332867740|ref|ZP_08437812.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332729886|gb|EGJ61218.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733746|gb|EGJ64898.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 139

 Score = 38.1 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    + K +  E
Sbjct: 12  VCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMTQLKLQGPE 71

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                +  + +A  T  +C          A++ +GG G++      R YRE   N I  G
Sbjct: 72  LVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTKSERIYREVKVNMIGGG 124

Query: 446 SGNAM 450
           +   M
Sbjct: 125 AEEIM 129


>gi|118616152|ref|YP_904484.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium ulcerans Agy99]
 gi|118568262|gb|ABL03013.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium ulcerans Agy99]
          Length = 650

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV------EGRV 253
           LTE   G+D A + S    I DG  Y L G K W  +  +++  +++A+V       G +
Sbjct: 170 LTEPDVGSDPARLASTATPIDDGQAYELEGIKLWTTNGVVAELLVVMARVPKSEGHRGGI 229

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V    E  SP G+  +R    +G R    +E   +      +   N+     + ++
Sbjct: 230 SAFVV----EADSP-GITVERRNKFMGLRG---IENGVTRLHRVRVPKENLIGREGDGLR 281

Query: 314 I-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I L  L++  +++  M     + SL  A  ++  R   G  L     +   I+ IA    
Sbjct: 282 IALTTLNAGRLAIPAMVTGAAKWSLKIAREWSGERVQWGKPLGKDEAVAGKISFIAATTY 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+        DE ++        RI A + K W  +MA  V  E ++  GG GY   
Sbjct: 342 ALEAVVEISGQMADEGRND------IRIEAALAKLWSSEMACQVADELLQIRGGRGYETA 395

Query: 428 RSI-ARHYRESPA---------NSILLGSGNAMVL 452
            S+ AR  R +P          N I  GS   M L
Sbjct: 396 ESLAARGERAAPVEQSLRDVRINRIFEGSSEIMRL 430


>gi|284163305|ref|YP_003401584.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284012960|gb|ADB58911.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 388

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 24/270 (8%)

Query: 181 REYDPTNKAPMQKTSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
           REY    +     T +A G     + +TE   GT+   + ++ ++  D  Y L+G K W 
Sbjct: 101 REYGTDEQKERYLTDIATGERNFSIAITEPEAGTNTLNVATRAERDGDE-YVLNGKKAWI 159

Query: 235 LSSPMSDAFIMLA------QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             S  +D  I++       +VE G  G  L    ++D  PN       K+ I    +  V
Sbjct: 160 TFSDRADNMILVTRTTPRDEVERGTDGISLFVVDMDD--PNIDVSPIPKHAINYSKSCEV 217

Query: 288 ELEFSNTFG-FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            +E        LLGD +     + DM     +  A       +++   AI Y+  R + G
Sbjct: 218 FIEDVRVPAENLLGDEDDGWWVLVDMLNPERIGFAAAGTGIGKLAANAAIEYSNDREIFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   I +    +  A  +  + A  +D+     EE  Y   +A  T      
Sbjct: 278 APIGTHQAVSFPITEAYAKMETAALMREKAAWLYDQG----EECGYETNVAKAT---AVD 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +  AM+  GG GY +E  + R +RE
Sbjct: 331 AGIEAVKHAMQAFGGWGYAKEYDVERWWRE 360


>gi|162453558|ref|YP_001615925.1| butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161164140|emb|CAN95445.1| Butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 600

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 34/291 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE + G+ +A + +   K   G Y + G K F+S    D       + LA++EG   
Sbjct: 165 MALTEPQAGSSLADVQASAVKTDAGHYLVRGSKIFISGGDHDLTENIVHLTLARIEGAPR 224

Query: 253 ----VGCFLVPRLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302
               V  F VP+   +G    PN +    + +K+G R   ++ L F    +  G+L+G  
Sbjct: 225 GIKGVSLFAVPKRRPEGGQLVPNDVEVAGMIHKLGWRGLPSLSLSFGEKGDCHGYLVGSP 284

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--------- 353
           +     +  M     +     +V+    +  EA+ YA  R     +    P         
Sbjct: 285 HQGVACMFQMMNEARILVGANAVATASAAYHEALGYALVRPQGRPLGARDPGAPQVPIIE 344

Query: 354 --------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
                   + ++AI +  L + + TAL   LA    +A  R        ++ PI K +  
Sbjct: 345 HADVRRMLLRQKAIVEGGLALVSTTALYADLAAHAADAAERERAQRLLDLLTPIAKTFPA 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +      A A++  GG GY  E       R+   NSI  G+     LD+L 
Sbjct: 405 EKGFESNALALQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLG 455


>gi|213650154|ref|ZP_03380207.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 225

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 19/196 (9%)

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILI 316
           D S  G+   +L+ K+G R ++  E+ F +        FG      N      +  + L+
Sbjct: 31  DMSKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLV 89

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A+ +      +  +A  YA +R   G  +    +++   A +A+ + +       +
Sbjct: 90  ----ALTNYGTAMCTFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNS-------M 138

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            N   EA  +++        A + KY+C   A  V+  AM+ +GG G      I R +R+
Sbjct: 139 KNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRD 198

Query: 437 SPANSILLGSGNAMVL 452
              + +  GS    +L
Sbjct: 199 LRVDRVSGGSDEMQIL 214


>gi|116750712|ref|YP_847399.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699776|gb|ABK18964.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 555

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 17/265 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247
           P     +     LTE R G+D   I +  +   DG  Y L+G K ++++   +    + A
Sbjct: 133 PAATGEMIFSYALTEPRIGSDAQHIETLAELSPDGSHYILNGQKTYITNANYAGGLTVFA 192

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +++ R   FL   ++E G   G+   +   K+G ++++T  + F+N     +   N+   
Sbjct: 193 RMDPRRPGFLGVFIVETGW-EGVKVGKDMPKMGLKASSTAPVRFTNV---RVPVENLLGK 248

Query: 308 PVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           P E  KI +       L     SV  M  SL + +  +  R      + D P+++  +  
Sbjct: 249 PGEGFKIAMTVLNYGRLGLGAASVGMMERSLRDMMKRSSTRVQFQVPIRDFPLIQEKLVR 308

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             ++ A + A++   A  F  A  R   A    I     K +    A   + +A++  GG
Sbjct: 309 ARVNAAVSKAMN-DFAAHFLNAAPRLNVA----IETSHCKLFGTTRAWDTLYDALQVAGG 363

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           SGY+  +   +  R+    ++  G+
Sbjct: 364 SGYLSTQPYEKRMRDFRVATVFEGT 388


>gi|229490980|ref|ZP_04384813.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229322096|gb|EEN87884.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 482

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 226 YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  + ++  S+ F++ A+++G+   F+V     +    GL  +     +G R+ 
Sbjct: 266 YKLNGVKSLVPAAATSELFVIAAELDGKPSFFIV-----ESDTKGLVVE-ADPSMGLRAA 319

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVE--DMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
               L  ++   +   LLGD +      E  D   L  L  A M+V   +  L   I Y 
Sbjct: 320 GLGRLILTDVAVSESALLGDGDAEQRKAEYADAIRLARLGWASMAVGTSQAVLDYVIPYV 379

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +  +  +   +A+I +++     ++ R A+  ++  S + E+A AR +A  
Sbjct: 380 NEREAFGEPISHRQAVAFMVANIGIELDGLRLVTLRGASRAEQGLSFARESALARKLA-- 437

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 +    +  + ++ +GG G+ +E  + R YR+
Sbjct: 438 -----SEKGMQIGLDGVQLLGGHGFTKEHPVERWYRD 469


>gi|255691156|ref|ZP_05414831.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
 gi|260623251|gb|EEX46122.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
          Length = 1907

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 4/155 (2%)

Query: 314  ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            IL YL   I+++SG +V  A  I YA      G +L    +  +AIA I LD A     +
Sbjct: 1541 ILQYL--YIVAISGEQVPAASKIAYAYYLSKVGELLTSSSMETKAIAAIVLDKAGRKKEA 1598

Query: 374  FRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                 S  E  ++++E    +A    P         A   + EA+E IGG+G  E     
Sbjct: 1599 QEFVASLKEHLTKTDEQGMFFAFNENPYAWGGMKLQAHVDVMEALELIGGNGNRETIEEM 1658

Query: 432  RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            + +      +    S  A    V  LL KG NL +
Sbjct: 1659 KLWLLKQKQTQQWSSPVATADAVYALLMKGANLLD 1693


>gi|255039418|ref|YP_003090039.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254952174|gb|ACT96874.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 452

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 39/265 (14%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           MQ+  +    GLTE   G+  A  +T+  +K  D        KW  ++  SD  I+ A+ 
Sbjct: 185 MQRMELIGAFGLTEPEVGSGAAGGLTTTCKKEGDEWVINGQKKWIGNATFSDITIIWARD 244

Query: 250 EG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS--NA-----------TVELEFSNT 294
            G  +V  F+V +        G   +++++K+  R+  NA           T  L+ +N+
Sbjct: 245 LGDNQVKGFIVKK-----ENPGFKAEKMEDKMALRTVQNALITLTDCRVPETDRLQNANS 299

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
           F      L ++   V           A  +V   R +   A+ Y  +R   G  +    +
Sbjct: 300 FKDTANVLRMTRAGV-----------AWQAVGCGRGAYELALKYTMQRKQFGRPIAGFQL 348

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  +  D+ A   + +RL+   D      E A+ A++       +C     +++  
Sbjct: 349 VQDLLVTMLGDLTAMQTMVYRLSQLQDAGDLADEHASLAKV-------FCTLRMRSIVDH 401

Query: 415 AMECIGGSGYIEERSIARHYRESPA 439
           A E  GG+G + E  IAR   ++ A
Sbjct: 402 ARELFGGNGILLEYDIARFVADAEA 426


>gi|284990873|ref|YP_003409427.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
 gi|284064118|gb|ADB75056.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
          Length = 407

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 59/291 (20%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A++ +    + W P             PM +        LTE   G+D  A+ +  ++ 
Sbjct: 125 IAMLGSEEQKQRWLP-------------PMARCEALGAFALTEPDHGSDSIALETSARRD 171

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  Y L+G  KW  +  ++D  ++ A+   +G+V  FLV +        G   +R++ K
Sbjct: 172 GES-YVLNGSKKWIGNGTIADVVVVWARDTDDGQVKGFLVEK-----GTQGYRARRIEGK 225

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----------KILIYLDS--AIMSV 325
              R+    E+E        L D+ V   P E+M            +L       A M++
Sbjct: 226 GSLRAVWQAEIE--------LEDVRV---PAENMLPGGRSFKDTGAVLATTRGSCAWMAL 274

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                    A+ YA RR   G  L++  +++  +  +   + +      RLA+       
Sbjct: 275 GHAVAGYEAALTYAGRRKQFGKPLVEFQLIQERLVGMLAKVTSMQLYCRRLADL------ 328

Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               A   RI   +A + K      A AV+AEA + +GG+G + +  + RH
Sbjct: 329 ----ALAGRIEPTLAGLAKAHNTSTARAVLAEARDLLGGNGILLDFHVIRH 375


>gi|218755058|ref|ZP_03533854.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis GM 1503]
 gi|289763463|ref|ZP_06522841.1| predicted protein [Mycobacterium tuberculosis GM 1503]
 gi|289710969|gb|EFD74985.1| predicted protein [Mycobacterium tuberculosis GM 1503]
          Length = 236

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 13/184 (7%)

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G      + K+G + + T EL F N    + GD  +          L  LD    ++  
Sbjct: 47  EGFTVGPKERKLGIKGSPTTELYFENCR--IPGDRIIGEPGTGFKTALATLDHTRPTIGA 104

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + +  A     
Sbjct: 105 QAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAA----- 159

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A++   E     I A  +K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 160 ARAERGEPDLGFISAA-SKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQI 218

Query: 443 LLGS 446
             G+
Sbjct: 219 YEGT 222


>gi|262368203|ref|ZP_06061532.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315881|gb|EEY96919.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 399

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 38/267 (14%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVG--- 254
           + +TE   G+D AAI +    I DG  Y L+G K F++S   +DA ++ A ++ ++G   
Sbjct: 130 MAITEPNCGSDSAAIRTTA--IKDGKDYILNGEKIFVTSGERADAIVVWATLDKKLGRSA 187

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD--LNVSTG 307
              F++P+        G+  +RL++K+G +++ T  +   +       LLG+  ++++ G
Sbjct: 188 IKSFVIPK-----GTAGMKVERLEHKLGIKASDTAVIRLIDCRVPANNLLGNAVIDIAKG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ---PVMK-----RAI 359
               M+     D+    V+ M +  A+A    R + +    L  Q   P ++       I
Sbjct: 243 FAGVMET---FDNTRPLVAAMAIGCAKA-SLERIKEIFSDCLDPQYITPYLQTTHIVNQI 298

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  +  AA  L+ + A   D  K  S+EA+       I+K    ++   +  + +E  
Sbjct: 299 YRMEAEWEAARLLTLKAAWMADNKKPNSKEAS-------ISKAKAGRICNEITLKCVELA 351

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
              GY E+  + +  R+S    I  G+
Sbjct: 352 STVGYNEDELLEKWARDSKILDIFEGT 378


>gi|56421929|ref|YP_149247.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261420799|ref|YP_003254481.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319768469|ref|YP_004133970.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56381771|dbj|BAD77679.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261377256|gb|ACX79999.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317113335|gb|ADU95827.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 377

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VG 254
           LTE   G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A+          + 
Sbjct: 124 LTEPSAGSDAKSLKTKAVRRGD-RYVLNGSKIFITNGGEADTYIVFARTNPEEAGSRGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G+   + + K+G   + TV + F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GMSIGKDEKKMGLHGSRTVTITFEDA---EVPAENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + ++   + +AEA       YA+ R   G  +I+Q  +   +AD+A    A
Sbjct: 235 AMANLDVGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIIEQQGVAFKLADMATAAEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A    +     +EA+ A++ A  T      M  A+  EA++  GG+GY ++ 
Sbjct: 295 AKWLVYRAAWLRAQGLPCGKEASMAKLFASQT-----AMDNAI--EAVQIFGGNGYTKDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 348 PVERLFRDAKITQIYEGT 365


>gi|297531594|ref|YP_003672869.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297254846|gb|ADI28292.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 377

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 29/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VG 254
           LTE   G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A+          + 
Sbjct: 124 LTEPSAGSDAKSLKTKAVRRGD-RYVLNGSKIFITNGGEADTYIVFARTNPEEAGSRGIS 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F+V    E G+P G+   + + K+G   + TV + F +     +   N+     E  KI
Sbjct: 183 AFIV----EKGTP-GMSIGKDEKKMGLHGSRTVTITFEDA---EVPAENLLGQEGEGFKI 234

Query: 315 -LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  LD   + ++   + +AEA       YA+ R   G  +I+Q  +   +AD+A    A
Sbjct: 235 AMANLDVGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIIEQQGVAFKLADMATAAEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A    +     +EA+ A++ A  T      M  A+  EA++  GG+GY ++ 
Sbjct: 295 AKWLVYRAAWLRAQGLPCGKEASMAKLFASQT-----AMDNAI--EAVQIFGGNGYTKDY 347

Query: 429 SIARHYRESPANSILLGS 446
            + R +R++    I  G+
Sbjct: 348 PVERLFRDAKITQIYEGT 365


>gi|119478554|ref|ZP_01618497.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119448458|gb|EAW29707.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 418

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 17/218 (7%)

Query: 226 YCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + ++G KWF S+  +  F ++      A  +G V   +   ++   SP G  + R     
Sbjct: 172 WVINGRKWFTSNARNADFAIVMCRTETADDDGNVNSKMTQIIVPTDSP-GFEHVRDIPVW 230

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G+   +  E+ ++N        LG         +D      +   +  V  M  +    +
Sbjct: 231 GHTGGSHGEIRYNNVRVPKENALGQRGTGHAAAQDRLGAGRVYHCMNCVGSMWRAFDLMV 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
             A  R V GG L ++  ++  IAD  +DI AA  ++   A   +  +    + +  ++ 
Sbjct: 291 KRATEREVHGGKLEEKQFIQGFIADSYMDIQAARLMTIHTAEIIESGRDPRTDISAIKVF 350

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            P   +        V+  A++  GG G   E  +A  Y
Sbjct: 351 VPAAMH-------RVVDRAIQTFGGIGVSTEHPLAGFY 381


>gi|324511917|gb|ADY44949.1| Medium-chain specific acyl-CoA dehydrogenase 10 [Ascaris suum]
          Length = 418

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 112/267 (41%), Gaps = 23/267 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
           M +  +     +TE   G+D++ I ++ +K  D  Y ++G K W  ++  ++ + +L + 
Sbjct: 138 MTEEPLIAAYAVTEPNAGSDVSNIKTKCEKKGDE-YIINGSKMWITNAGPANWYFVLCRS 196

Query: 250 E----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +              ++E  SP G+   + +  +G  ++ T  L F +     +   N+ 
Sbjct: 197 DPNPKAPTSKAFTAFVVEADSP-GITKGKKEKNMGQHASDTRGLTFEDV---RVPASNMV 252

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359
             P E   + +   D    +V+G+   L      EA  YA  R   G  + +   +   +
Sbjct: 253 GPPGEGFVVAMRTFDRTRPAVAGLATGLQARCLDEASKYALERKTFGIPIANHQAVATML 312

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+++  +  +++R A        R   ++ A+  A          A    + A++ +
Sbjct: 313 ADMAINMELSRMITYRCAWEVMSGVPRGYYSSMAKCFA-------ADSANIAASNAVQIL 365

Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446
           GG+GY  E  + +  R++    I  G+
Sbjct: 366 GGNGYNSEYPVEKLMRDAKLFQIYEGT 392


>gi|229489216|ref|ZP_04383082.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324720|gb|EEN90475.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 427

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 54/281 (19%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EG------- 251
           +TE   G+D    + S  ++  D  Y L+G+K F+++ P +D  I+ A++ EG       
Sbjct: 161 ITEPDSGSDAFGGMKSYVRRDGDD-YILNGNKTFITNGPYADVMIVYAKLDEGDASVDRR 219

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
             +V  F++ + +E     GL       K+G  S+ T EL F N   T   LLG+     
Sbjct: 220 DRKVLAFILDKGME-----GLTQSPPFKKMGMNSSPTGELFFDNVRITKDRLLGE----- 269

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPV 354
              ED        SA  S +  R+ +A             +I YA+ R + G        
Sbjct: 270 --TEDSGKSDGKSSAKESFAAERIGIASLSLGIINECHRLSIEYAKSRKLWG-------- 319

Query: 355 MKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPA 410
             R I     I L +A        + N    A  R+       +  A   K +  + A  
Sbjct: 320 --REIGQFQLIQLKLAEMEVARINVQNMVFNAIERTAAGDKVSLAEASAMKLYSSRAATE 377

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           V  EA++  GG+GY+ E  + +  R++ +  I  GS    V
Sbjct: 378 VAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEIQV 418


>gi|118465800|ref|YP_882857.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167087|gb|ABK67984.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 418

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 26/246 (10%)

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQ-------VEGRVGCFLVPRLLEDGSPNGLCYQR 274
           DG Y L+G K F+++ P +D  ++ A+       V+ R    LV  +L+ G P GL   +
Sbjct: 172 DGAYILNGQKTFITNGPYADVLVVYAKLDEGDPSVDKRNRSVLV-FVLDAGMP-GLTQGK 229

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRV 330
              K+G  S+ T EL F N   T   LLG+    T G   D     +    I  ++ M +
Sbjct: 230 PFKKMGMMSSPTGELFFDNVRLTPDRLLGESEQHTEGDGRDSARANFAAERI-GIAMMAL 288

Query: 331 SLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            + +  H     YA+ R + G  +    +++  +A + +       + F         K 
Sbjct: 289 GIIDECHRLCVDYAKSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMVFHTIERQQAGKP 348

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +   A A       K +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  G
Sbjct: 349 LTLAEASA------IKLYSSEAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAG 402

Query: 446 SGNAMV 451
           S    V
Sbjct: 403 SNEVQV 408


>gi|311697032|gb|ADP99905.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 379

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 47/314 (14%)

Query: 154 PSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P +TS    ++A    P + K+W   + S           QK +    + LTE  GG+D 
Sbjct: 87  PLLTSLNGQIIASHAAPDLAKEWLHGMTSG----------QKVAC---IALTEPHGGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ---VEGR---VGCFLVPRLLED 264
           A +  + +K  D +Y L+G K  +S +  +D  ++ A+   VE R   +  FLVP     
Sbjct: 134 ANLRLKAEKKGD-VYVLNGEKTSISMADQADVAVVFARTGTVEQRASGISAFLVPM---- 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
            SP G+   R ++  G R+     + F N       ++GD     G  + M+   Y   A
Sbjct: 189 DSP-GITTTRFEDN-GQRAIGRGSIFFDNVEVHASQMMGD--EGKGFKQVMQGFDY-SRA 243

Query: 322 IMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++ +  + V   SL E   +   R   G  L     +   +A+    + AA    +    
Sbjct: 244 LIGLQCLAVAQQSLDETWQWLTERTAFGQNLSAFQGLTHPLAEYQTYVHAARMQCYHALW 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  + EAA       + K+W  K+A  V+ + +   G +G+ E+   A+  R+  
Sbjct: 304 LKDNNRPHNAEAA-------MNKWWGPKLAFDVVKQCLLAHGHTGWGEDLPFAQRLRD-- 354

Query: 439 ANSILLGSGNAMVL 452
              + +G G A ++
Sbjct: 355 VLGLQIGDGTAQIM 368


>gi|257076197|ref|ZP_05570558.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 385

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 26/246 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-----SDAFIMLAQVEGR 252
           IG+  TE  GG+D+A I + G +I +G   ++G K ++S  +         + L + +  
Sbjct: 122 IGIASTEPSGGSDVANIKTTG-RIENGKVIINGEKMYISGAVEAKKNGGGHLTLVKTKEG 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN----VS 305
           VG   +  +    + +G+   +L N +G    +T  ++++N       ++G++N     S
Sbjct: 181 VGHKGITMVYVPANADGIEITKL-NNMGRMGISTSGIKYTNVEVPEENIIGEINEGFYYS 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVS-LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                  +I++       + +G+    L E ++Y + R   G  L D   +    AD+  
Sbjct: 240 MDGFNHARIMV-----AAACNGLSYKMLEEGLNYIKERKAFGKHLSDFEAISFEAADLRT 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+  A  L+++ A   D      E+  +  I + ++K    ++A     + M   G  GY
Sbjct: 295 DVEMAALLNYKAAYLAD-----VEDPDF-YIYSSMSKLKSPQIAMDTTKKVMMWFGAYGY 348

Query: 425 IEERSI 430
            ++  I
Sbjct: 349 TKDSGI 354


>gi|330871195|gb|EGH05904.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 264

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKY 402
           +I  P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K 
Sbjct: 13  IIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKA 72

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +   +         +  GG GYI E    +  R+     I  G+     LD++     G+
Sbjct: 73  FLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGS 132

Query: 463 N-LFEQLFS 470
           N  F QLFS
Sbjct: 133 NGAFYQLFS 141


>gi|319440872|ref|ZP_07990028.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 394

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 19/263 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           +  E    N  P       IG  GLTE   G+D A + ++  +  D  + L+G K W  +
Sbjct: 111 WGSEEQKENYLPKMAAGEYIGCFGLTEPDAGSDPANMRTRAVRDGDE-WILNGTKMWITN 169

Query: 237 SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           SP++D  ++ A+ + R  G       + D    G     +  K+  R++ T E+   +  
Sbjct: 170 SPIADVAVVWAKTDDRGDGKPGYAGFILDKGDAGFTAPEIHRKLSLRASVTGEIVLDDC- 228

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILI 350
              L D     G       L  L+ A   +        R +L  AI Y   R V    L 
Sbjct: 229 --RLPDSRRLPGVSSLRGPLTCLNEARYGIIWGALGAARNALETAIEYTSTRQVFDRPLS 286

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + +  +AD+ +++  +  L+ ++    D  K    + +  ++ +        ++A  
Sbjct: 287 SFQLTQAKLADMTVELDKSVLLALQIGRLKDAGKLSPHQVSVGKLNS-------TRVALE 339

Query: 411 VIAEAMECIGGSGYIEERSIARH 433
           +  E    +G SG   E S  RH
Sbjct: 340 ITRECRTLLGASGITLEYSPLRH 362


>gi|304404756|ref|ZP_07386417.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346563|gb|EFM12396.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 392

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 35/268 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             LTE   G+D A+I ++  K  D  Y L+G K F+++   +D +I  A  +   G   +
Sbjct: 125 FALTEPHAGSDAASIRTRAVKDGDE-YLLNGTKMFITNAGAADLYITFAVTDPSRGPGGI 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311
              L +    G    + + K+G   + T EL F       S   G       ++ G ++ 
Sbjct: 184 TAFLLERGVQGFIVGKKEKKMGLHGSNTCELRFEDVRIPASQRLGEEGQGFAIAKGSLDG 243

Query: 312 MKI-------------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            +I             L  + SAI      R      I     RH S    I   + +  
Sbjct: 244 GRIGIAAQSLGIAEAALQLIQSAICPTLPNRARSTPLIRSVHHRHKS----ISAEMAE-- 297

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++   + AA  L +R A    E    ++E++ A++ A  T       A  V   A+  
Sbjct: 298 LAELTAQVEAARLLVYRAAFLRQEGLPCTKESSTAKLFASDT-------AVEVAGAAVRL 350

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
           +G  GY +     R +R++    I  G+
Sbjct: 351 LGMKGYTKASPAERLFRDAKVTQIYEGT 378


>gi|262203341|ref|YP_003274549.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086688|gb|ACY22656.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 456

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)

Query: 226 YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPR----LLEDGSPNGLCYQRLKNKIG 280
           Y L+G K F+ S+  S+ FI+ AQ++G+   F+V      L+ +  P          ++ 
Sbjct: 240 YRLNGVKSFVPSAGSSELFIVGAQLDGKPALFIVESDSKGLIVEADPGMGVRAAGMGRLL 299

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            R  A  E   S   G   GD + +     D+  L  L  + ++    +  L   I Y  
Sbjct: 300 LRDVAVPE---SALLGEEPGDASFAA--YRDVVRLSRLGWSALAAGTAKAVLDYVIPYVN 354

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + ++  +   +A IA ++ +   ++ R A   ++  S + EAA AR +  I 
Sbjct: 355 EREAFGEPISNRQAVAFMVATIATEVDSIRLVTLRGAARAEQGLSFAREAALARKLT-ID 413

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           K     +      + ++ +GG G+ +E  + R YR+
Sbjct: 414 KGLQIGL------DGVQLLGGHGFTKEHPVERWYRD 443


>gi|225871867|ref|YP_002753321.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225793368|gb|ACO33458.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 392

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 27/266 (10%)

Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236
           F  E       P   T   +G  GLTE   G++   + ++ +K +DG Y L+G K W  S
Sbjct: 112 FGSEEQKNEWLPKLATGEKLGCFGLTEPDFGSNPGGMRTRARKTADG-YVLNGEKMWITS 170

Query: 237 SPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             ++D  ++ A+VE    RV  FLV     +    G   + +  K   R++ T  L   +
Sbjct: 171 GSIADVAVIWAKVEDEDDRVRGFLV-----ETDRKGFEARDVHGKWSLRASVTSGLSLQD 225

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR-RRHVSGG 347
                  +L   TG ++    L+ L+ A   +S   +  A      A+ Y + R+     
Sbjct: 226 VH-VPAKNLLPGTGGLK--SPLMCLNQARYGISWGVIGAAMACYDTALQYTQTRKQFRDQ 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    +++  +A +  +I+ A  L   +    D  K   E  +    MA     W   M
Sbjct: 283 PLASHQLVQEKLAWMITEISKAQLLIHHVGKLKDAGKVGFEHIS----MAKRNNVW---M 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433
           A      + + +GG+G  ++  I RH
Sbjct: 336 ALECTRISRDMLGGNGITDDYPIMRH 361


>gi|111022111|ref|YP_705083.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821641|gb|ABG96925.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 411

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 36/272 (13%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLV 258
           +TE   G+D    + S  ++  D  Y L+G K F+++ P +D  I+ A++ EG       
Sbjct: 144 ITEPDSGSDAFGGMKSYVRRDGDD-YILNGQKTFITNGPYADVIIVYAKLDEGDSSVDRR 202

Query: 259 PR----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            R     + D    GL       K+G  S+ T EL F N   T   LLG+     G   D
Sbjct: 203 DRKVLAFVLDAGMEGLTQGAPFKKMGMNSSPTGELFFDNVRLTRDRLLGE--TEDGGKSD 260

Query: 312 MKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAI 359
            K      SA  S +  R+ +A              I YA+ R + G  +    +++  +
Sbjct: 261 GK-----SSAKESFAAERIGIASLSLGIINECHRLCIDYAKSRKLWGKEIAQFQLIQLKL 315

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ +       + F   N+  E  +  ++ + A   A   K +  + A  V  EA++  
Sbjct: 316 AEMEIARINVQNMVF---NAI-ERTAAGDQVSLAE--ASAMKLYSSRAATEVAMEAVQLF 369

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           GG+GY+ E  + +  R++ +  I  GS    V
Sbjct: 370 GGNGYMAEYRVEQLARDAKSLMIYAGSNEIQV 401


>gi|254393658|ref|ZP_05008785.1| methoxymalonate biosynthesis protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294810842|ref|ZP_06769485.1| Methoxymalonate biosynthesis acyl-CoA dehydrogenase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326439520|ref|ZP_08214254.1| methoxymalonate biosynthesis protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|197707272|gb|EDY53084.1| methoxymalonate biosynthesis protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294323441|gb|EFG05084.1| Methoxymalonate biosynthesis acyl-CoA dehydrogenase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 369

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 41/263 (15%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G +E   G+D++AIT++ ++  D +  L GHK W  ++  +D  I+  +           
Sbjct: 114 GFSEPAAGSDLSAITTRIRRDGDTVV-LDGHKIWVTAAHYADLLILFGR----------- 161

Query: 260 RLLEDG--------SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308
              EDG        S  G+  +R+ + +G R+    ++         G LLG  ++   P
Sbjct: 162 --YEDGAAAVVVPASAPGVRIERVGDPLGCRAAGHADITLDAVRVPAGNLLGGHSL---P 216

Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +  + +   L    MSV+      +R  L  A  +A RR   G  L    ++ R +A++ 
Sbjct: 217 LPFL-VTTALAHGRMSVAWGCVGILRGCLKAAGQHAARRSQFGVPLGGHQLVARHLAELL 275

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +    AT      +  +DE    S +   A ++A   KY   + A    A A++ +  +G
Sbjct: 276 VAKETATRACEHASRCWDEG---SPDQVMATVLA---KYLSAREAARGAATAVQVLASAG 329

Query: 424 YIEERSIARHYRESPANSILLGS 446
             +   +AR +R++    I+ GS
Sbjct: 330 ARDGHVVARAHRDAKLMEIIEGS 352


>gi|196935975|gb|ACG80610.1| acyl-CoA dehydrogenase [Burkholderia andropogonis]
          Length = 250

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   GTD     +  +   DG  Y L+G K F+S S  +D FI+ A+V G     F+V
Sbjct: 146 LTEASSGTDALGAKTHAKLSGDGAYYILNGTKQFISGSSFADVFIVFAKVNGTDFSAFIV 205

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            R     S +GL     + K+G + ++T  L
Sbjct: 206 ER-----SFDGLHIGPEEKKMGLKGSSTCSL 231


>gi|154319989|ref|XP_001559311.1| hypothetical protein BC1G_01975 [Botryotinia fuckeliana B05.10]
 gi|150854714|gb|EDN29906.1| hypothetical protein BC1G_01975 [Botryotinia fuckeliana B05.10]
          Length = 1486

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 22/176 (12%)

Query: 198  IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGR--- 252
            I + +TE   G+D++AI +  +K  DG  + + G  KW  +   SD   M  +  G    
Sbjct: 1236 ICIAITEPGAGSDVSAIETTARKSDDGSEWIVDGSKKWITNGLWSDYATMAVRTGGAGPA 1295

Query: 253  -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA-TVELEFSNTFGFLLGDLNVSTGPVE 310
             +   +VP L   G    +  +R+K  +G ++ A T  +E  N     +   N+      
Sbjct: 1296 GLSLLIVPLLQHPG----VTMRRIK--VGGQTAAGTTFIELDNV---RVPRENLIGTEGS 1346

Query: 311  DMK-ILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             MK I+   +   +S+S       R +L++A  Y  +R   G  ++DQPV++  +A
Sbjct: 1347 GMKYIMQNFNHERLSISISVNRIARTALSQAFEYVMKRKAFGKPVMDQPVVRNRLA 1402


>gi|226305788|ref|YP_002765748.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184905|dbj|BAH33009.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 480

 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 226 YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K  + ++  S+ F++ A+++G+   F+V     +    GL  +     +G R+ 
Sbjct: 264 YKLNGVKSLVPAAATSELFVIAAELDGKPSFFIV-----ESDTKGLVVE-ADPSMGLRAA 317

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVE--DMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
               L  ++   +   LLGD +      E  D   L  L  A M+V   +  L   I Y 
Sbjct: 318 GLGRLILTDVAVSESALLGDGDAEQRKAEYADAIRLARLGWASMAVGTSQAVLDYVIPYV 377

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +  +  +   +A+I +++     ++ R A+  ++  S + E+A AR +A  
Sbjct: 378 NEREAFGEPISHRQAVAFMVANIGIELDGLRLVTLRGASRAEQGLSFARESALARKLA-- 435

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                 +    +  + ++ +GG G+ +E  + R YR+
Sbjct: 436 -----SEKGMQIGLDGVQLLGGHGFTKEHPVERWYRD 467


>gi|162450263|ref|YP_001612630.1| glutaryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161160845|emb|CAN92150.1| Glutaryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 370

 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 21/193 (10%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEG----RV 253
            GLTE   G+D +++ ++ +K  DG  Y L+G K W  S+P++D  ++ A+V+      +
Sbjct: 112 FGLTEPDSGSDPSSMKTRARK--DGSAYVLTGTKMWITSAPIADLCVVWAKVDDGGAESI 169

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F+V R ++     GL    +  K+  R++ T E+  +      + + NV  G V    
Sbjct: 170 RGFVVERGMK-----GLETPLIHGKMSLRASPTGEIVLNEV---RVPEENVLPGVVGLKG 221

Query: 314 ILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L  L  A   ++       R     A+ YAR R   G  +  + +++  + ++A +IA 
Sbjct: 222 PLGCLTQARFGIAWGALGAARACYETAVSYARERVQFGQPIASRQLIQSELVEMATEIAK 281

Query: 369 ATALSFRLANSFD 381
              ++       D
Sbjct: 282 GQLMALHFGRLKD 294


>gi|319951219|ref|ZP_08025057.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435118|gb|EFV90400.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 388

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239
           REY P   A         G+G++E   G+D+A++ ++G K+ DG + ++G K W   +  
Sbjct: 117 REYLPRIAA----GECCFGIGMSEPDSGSDLASVRTKGVKV-DGGWSITGTKVWTSGAQH 171

Query: 240 SDAFIMLAQVE 250
           ++AFI L + E
Sbjct: 172 AEAFIALCRTE 182


>gi|265985097|ref|ZP_06097832.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|264663689|gb|EEZ33950.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
          Length = 324

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 50/263 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254
            G+TE   GTD  A+ +  ++  D  + ++G K W   +  SD  ++LA+     +G   
Sbjct: 59  FGVTEPTSGTDTGALKTTARREGDE-FIINGQKIWTSRAEYSDLMLLLARTSPLTDGMKK 117

Query: 255 CFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFGF 297
              +  L+ D      NGL  + ++  +   ++AT E+ F N               F +
Sbjct: 118 TDGLSVLIVDMAKAKNNGLTIRPIRTMM---NHATTEVFFDNLRVPVSNLIGEEGKGFRY 174

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +L  +N         +ILI    A   +   +    +++ YA+ R + G  +     ++ 
Sbjct: 175 ILSGMNAE-------RILI----AAECIGDAKWFTQKSVDYAKERSIFGRPIGQNQGIQF 223

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA    ++ AA  +       ++  ++   EA  A+++A          A A    A  
Sbjct: 224 PIAKAYANMRAAELMVQSALALYEAGQNPGAEANMAKMLA----------ADASFEAANA 273

Query: 418 CI---GGSGYIEERSIARHYRES 437
           C+   GG G+ EE  + R +RE+
Sbjct: 274 CVQTHGGFGFAEEYDVERKFRET 296


>gi|309812442|ref|ZP_07706197.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308433747|gb|EFP57624.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 391

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 26/263 (9%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
           PM  +  A+G  GLTE   G+D +   +  ++  D  + ++G K F+++  +D   ++  
Sbjct: 117 PMLASGEALGGFGLTEAGAGSDASGTRTTAKEDGD-EWVINGSKQFITNSGTDITKLVTV 175

Query: 248 --------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296
                     +GRV   +   ++   +P G   +   +K+G  ++ T  L FS+      
Sbjct: 176 TAVTGESQTADGRVKKEISTIIVPANTP-GFTAEPAYDKVGWNASDTHPLSFSDVRVPRA 234

Query: 297 FLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            LLG+     G    ++IL    +  A ++V   +  + E++ YA+ R   G  + +   
Sbjct: 235 NLLGERG--RGYANFLRILDEGRIAIAALAVGAAQGCVDESVKYAKERQAFGHAIGEYQA 292

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +      A +  +  A      K   + A+ A+++A  +     +       +
Sbjct: 293 IQFKIARMEARAHTARSAYYNAAALMLAGKPFKKAASIAKMVASESAMDNAR-------D 345

Query: 415 AMECIGGSGYIEERSIARHYRES 437
           A +  GG G++ E  ++RHYR+S
Sbjct: 346 ATQIHGGYGFMNEYVVSRHYRDS 368


>gi|289706055|ref|ZP_06502428.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289557257|gb|EFD50575.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 404

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 20/239 (8%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258
           LTE   G+D  ++ ++ +++  G + L GHK W  +       ++ A+   + +V  F+V
Sbjct: 149 LTEPTHGSDSVSLETRAERVDSG-WRLHGHKKWIGNGAAGGVTVVWARSAEDEKVRGFIV 207

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            +  E     G   + +K K+  R+     +     F     D+       +D   +++ 
Sbjct: 208 RQESE-----GYTAEVIKGKVALRAIDQAHITLDGVF-VPDADVLPEARSFKDTSRVLFA 261

Query: 319 DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
               ++ S +  ++     A+ YA +R   G  L     ++  +A++   +     L  R
Sbjct: 262 TRVGVAWSALGKAVGCYEAAVQYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQLLVLR 321

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                DE +           MA + KY   + A ++ A A + +GG+G + +  +ARH+
Sbjct: 322 ATRLEDEGRLTGP-------MASMAKYSATRAARSIAANARDLLGGNGILIQNEVARHF 373


>gi|115723096|ref|XP_787066.2| PREDICTED: similar to Acadl-prov protein, partial
           [Strongylocentrotus purpuratus]
 gi|115955857|ref|XP_001192505.1| PREDICTED: similar to Acadl-prov protein, partial
           [Strongylocentrotus purpuratus]
          Length = 325

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S +       E  +Y R+R   G  L +  V++  +A++   +    +         
Sbjct: 191 AVGSQAHAEFMFEETRNYVRQRKAFGKTLSNIQVIQHKLAELKTLLCVGRSF-------V 243

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D               A + K W    A  +  E ++  GG GY+ E  IAR + ++  N
Sbjct: 244 DNCLELGLNGKLDTYTASMAKLWTTDAANKIATECLQLHGGWGYMWEYPIARAFCDTRVN 303

Query: 441 SILLGSGNAM 450
           SI  GS   M
Sbjct: 304 SIYAGSNEIM 313


>gi|94310752|ref|YP_583962.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354604|gb|ABF08693.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 391

 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 11/219 (5%)

Query: 222 SDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            DG + ++GHKWF+S  +  AF I+LA+ +   G      +++  +P     + +    G
Sbjct: 151 QDGKWVINGHKWFISGAVDAAFAIVLARTDEAAGTGATMFIVDTDNPGYRLVRNIAGMDG 210

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +     E+ F         +LG +       +       L   +  +     ++  A  
Sbjct: 211 YQVGGHGEIVFEQCVVDDDAVLGQVGQGFAYAQARLEPARLSHCMRFIGRASRAMEIAQQ 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   G  L D   ++  +AD  +D+ A+  +    A   D  +S   ++A      
Sbjct: 271 YAAQRESFGQRLADLQQVQAMVADSHIDLHASRLMVRDCARKMDAGESVKHDSA------ 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +TK +  +    V   A++ +G  G  ++  ++   RE
Sbjct: 325 -MTKIFVSEAVWRVADRAVQIMGALGISDDTPVSMIQRE 362


>gi|288932871|ref|YP_003436931.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288895119|gb|ADC66656.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 394

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           + K  +   + LTE   GT+   I ++  K  D  + ++G+K F+S +  +   +++A+ 
Sbjct: 116 IAKGKLEFCMALTEPDAGTNTLNIRTRAVKDGDE-WVINGNKIFISGADRAKGMLIIART 174

Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
               E     + +   L D  PN         K G   + T E+ F+N     L     +
Sbjct: 175 TPREEAPKRTYGISLFLAD-LPNPAVKINPIPKHGINYSKTCEVSFNN-----LRLPENA 228

Query: 306 TGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             P +D    + LD+        A  ++   R+++++A+ Y+++R V    +     ++ 
Sbjct: 229 LIPPQDEGWYLILDTLNPERMSFAAAAIGIARLAVSKAVEYSKQRKVFQDPIGSYQGLQF 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A+    +  A  ++ + A  FD   S  E    A  MA +      +     +  AM+
Sbjct: 289 PLAEAYATLECAKLMNLKAAWLFDNNASYREVGDAAN-MAKVV---AVEAGIRAVYWAMQ 344

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY +E  + R +RE
Sbjct: 345 TFGGYGYTKEYDVERWWRE 363


>gi|319648709|ref|ZP_08002920.1| YdbM protein [Bacillus sp. BT1B_CT2]
 gi|317389128|gb|EFV69944.1| YdbM protein [Bacillus sp. BT1B_CT2]
          Length = 382

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 45/227 (19%), Positives = 99/227 (43%), Gaps = 30/227 (13%)

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +G + ++G K F + SP+ D F++ A +E +  +G FL+ +  E     GL  +   +  
Sbjct: 148 NGGWIVNGRKTFTTMSPVLDYFLVTAWIEEKQMIGVFLIHKDAE-----GLAIEETWDMA 202

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KILIYLDSAIMSVSGMRVSLAEA- 335
             R   + +L        +L D+ +    + ++   K    ++  ++ +  + + +A+A 
Sbjct: 203 AMRGTGSHDL--------VLTDVRLDESMLVELLAGKRTDKINGWLLHIPAVYLGIAQAA 254

Query: 336 ----IHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               + +A+    +   G + + P ++R I +I L++  A    + +A  +D+ + R   
Sbjct: 255 RDYAVQFAKDYQPNSLKGPIKEVPAVQRHIGEIDLELMKARHFMYHVAELYDDPERR--- 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A         K+     A AV+ +AM  +G         + R YR+
Sbjct: 312 -ALLTGELGAVKHTVTNTAIAVVDKAMRVVGAKSLARTNPLQRFYRD 357


>gi|330985838|gb|EGH83941.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 305

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKY 402
           +I  P ++R +  +        A S  +A   D AK   ++AA  R      ++ P+ K 
Sbjct: 54  IIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKA 113

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +   +         +  GG GYI E    +  R+     I  G+     LD++     G+
Sbjct: 114 FLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGS 173

Query: 463 N-LFEQLFS 470
           N  F QLFS
Sbjct: 174 NGAFYQLFS 182


>gi|171057872|ref|YP_001790221.1| cyclohexanecarboxyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
 gi|170775317|gb|ACB33456.1| cyclohexanecarboxyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
          Length = 389

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 111/293 (37%), Gaps = 27/293 (9%)

Query: 177 KIFSREYDPTNKAP----MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLS 229
           +I S+   P    P    + +      + LTE RGG+D A +  + ++ SD     Y ++
Sbjct: 97  QILSKYGHPDVVGPWLKKLTRGEAICAIALTEPRGGSDAANLRLRIERGSDAQGDFYVIN 156

Query: 230 GHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           G K  +S+   +D  ++  +      G   V  LL      G+   R     G R+    
Sbjct: 157 GEKTSISAADQADITVVFGRTGTPESGAHGVTALLVPMDSAGVTTNRFDCH-GQRAIGRG 215

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRR 342
            + F N        LGD N   G V+ M    +  S I    +S  RV+L E   Y  +R
Sbjct: 216 SIFFENVRVPVSHRLGDEN--KGFVQVMHGFDFSRSLIGLQCLSVARVALEETWEYITQR 273

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L     +   +A    ++  A  L  +     D     + EA  A       K+
Sbjct: 274 QAFGQPLSAFQGVTHPLAAYDTEVEGARLLCLQGLWLKDRGLPHTAEAGMA-------KW 326

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           W  K+A  VI + + C G  GY  +R +    R        +G G A ++  +
Sbjct: 327 WGPKLAYDVIHQCLLCYGHGGY--DRGLMEQ-RLRDVLGFQIGDGTAQIMKTI 376


>gi|226363234|ref|YP_002781016.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241723|dbj|BAH52071.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 44/271 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255
           + +TE   G+D+  + +   +  D  + ++G K F+++ + SD  I++A+ +   G  G 
Sbjct: 126 IAMTEPGAGSDLQGVKTTAVRDGDE-WVINGQKTFITNGIHSDLVIVVARTDVNAGSKGF 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGD 301
            L+  ++E G+P G    R  +K+G     T EL F +               F  L+ +
Sbjct: 185 SLI--VVERGTP-GFSRGRKLHKVGLAGQDTAELGFEDVRVPAANLLGAEGRGFVHLMEN 241

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L     P+E + I +   +A  +  G          Y   R   G  + D    + A+A+
Sbjct: 242 L-----PLERISIAVNAIAAAKAAYGW------TRDYVFDRKAFGKPIGDLQNTRFALAE 290

Query: 362 IALDIAAATALSFR--LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  +I    +   R  LA + DE  +         + A   K+W  ++   V+   ++  
Sbjct: 291 MLTEIEVTESHVDRCVLALNADELTA---------VDASKAKWWASELQKRVVDRCVQLH 341

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450
           GG GY+ E  I R Y +S   +I  G+   M
Sbjct: 342 GGYGYMMEYPIGRAYVDSRIQTIYGGTTEIM 372


>gi|226308325|ref|YP_002768285.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187442|dbj|BAH35546.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 409

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 54/281 (19%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EG------- 251
           +TE   G+D    + S  ++  D  Y L+G+K F+++ P +D  I+ A++ EG       
Sbjct: 143 ITEPDSGSDAFGGMKSYVRRDGDD-YILNGNKTFITNGPYADVMIVYAKLDEGDASVDRR 201

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
             +V  F++ + +E     GL       K+G  S+ T EL F N   T   LLG+     
Sbjct: 202 DRKVLAFILDKGME-----GLTQSPPFKKMGMNSSPTGELFFDNVRITKDRLLGE----- 251

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPV 354
              ED        SA  S +  R+ +A             +I YA+ R + G        
Sbjct: 252 --TEDSGKSDGKSSAKESFAAERIGIASLSLGIINECHRLSIEYAKSRKLWG-------- 301

Query: 355 MKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPA 410
             R I     I L +A        + N    A  R+       +  A   K +  + A  
Sbjct: 302 --REIGQFQLIQLKLAEMEVARINVQNMVFNAIERTAAGDKVSLAEASAMKLYSSRAATE 359

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           V  EA++  GG+GY+ E  + +  R++ +  I  GS    V
Sbjct: 360 VAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEIQV 400


>gi|330967257|gb|EGH67517.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 323

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 20/209 (9%)

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----------- 339
           F +  G+L+G+ N     +  M     L   I  ++    S   A+ YA           
Sbjct: 2   FDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTG 61

Query: 340 -RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394
            + +  +   +I  P ++R +  +        A S  +A   D AK   ++ A  R    
Sbjct: 62  AQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDL 121

Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ P+ K +   +         +  GG GYI E    +  R+     I  G+     L
Sbjct: 122 AALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQAL 181

Query: 453 DVLNLLEKGTN-LFEQLFS-TLEQDLGSS 479
           D++     G+N    QLFS  + Q +G+S
Sbjct: 182 DLVGRKIVGSNGALYQLFSDEVRQFIGAS 210


>gi|76802659|ref|YP_330754.1| acyl-CoA dehydrogenase 10 [Natronomonas pharaonis DSM 2160]
 gi|76558524|emb|CAI50116.1| acyl-CoA dehydrogenase 10 [Natronomonas pharaonis DSM 2160]
          Length = 384

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 48/260 (18%), Positives = 103/260 (39%), Gaps = 28/260 (10%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246
           P+ +     GL ++E   G+D+  + +  +K  D  + L+G K+++ + +   ++ L   
Sbjct: 116 PVAENDQLTGLAVSEPDTGSDLTGMETTAEKDGD-EWVLNGEKYWVGNGVEADWVTLYAR 174

Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                    G    F+VP        +G   + +  K+G R++    +E +     +  D
Sbjct: 175 TGDNPDDPYGNFSLFVVPT-----DTDGYDAEHIPEKMGFRASKQAHIELNGAR--IPED 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356
             +         +  + +   + V G  + LA     E   +   R   G  +     ++
Sbjct: 228 HLIGVEGAGFYMLAEFFNHGRVVVGGHGLGLAAAAIEETADFVHDRTAFGRDVAGFQKVQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+  +  AA  L+++ A   +E  +    AA A++ +  T   C +         M
Sbjct: 288 HILADMMTEFQAARTLNWQAATRVEENDNAGFWAAMAKVKSTETANDCAE-------RGM 340

Query: 417 ECIGGSGYIEERSIARHYRE 436
           +  GG   + +  I+R YR+
Sbjct: 341 QLHGGRSVLTKNRISRVYRD 360


>gi|302535671|ref|ZP_07288013.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302444566|gb|EFL16382.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 376

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 14/168 (8%)

Query: 331 SLAEAIHYARRRHVSGGIL-IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           SLA A+ Y   R   G  L  +Q VM RA AD  +D  A    ++       EA  R +E
Sbjct: 218 SLARAVEYTSTREQFGRPLSTNQAVMLRA-ADAYMDTEAIRVTAY-------EAAWRVDE 269

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              AR  A    +W  +    V+       GG G   +  + RH+         LG G+ 
Sbjct: 270 GLPARDHALTAAWWASEAGKRVVHAGQHLHGGMGADLDHPVHRHFLWGRQLDAYLGCGSE 329

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           ++ ++  L+ +G +   Q      +D  S G+  ++  +D +   +E+
Sbjct: 330 LLAELGALISEGEDSASQ-----GEDPVSEGEDPVSQGQDRMPEREEE 372


>gi|78223403|ref|YP_385150.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194658|gb|ABB32425.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 378

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 26/275 (9%)

Query: 186 TNKAPMQKTSV----AIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           T   P QK SV    ++G     L L E   G     I +  +K++DG + L+G K F+ 
Sbjct: 100 TAGTPEQKRSVLEEVSLGKRLMTLALEETGDGPSACEIATTAKKVADG-FLLNGCKRFVP 158

Query: 237 -SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            + ++D  I  A+    G+ G   +   L D    G+  + L N I    +   ++ F+N
Sbjct: 159 FAHVADTIICAARTGDGGKNGEEGISLFLVDRRSQGVSIEVL-NTIAR--DKQCDVVFNN 215

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  LLG+       ++ +  +  +      V G R  L   + YA+ R   G  + 
Sbjct: 216 VLVSGDSLLGEAGEGWQLLQGVLRVASVAKCAEMVGGARKVLEMVVEYAKTRKQFGQPIG 275

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++   A++   + ++  L+F  +    +  S  +EAA       + K W       
Sbjct: 276 SFQAIQHHCANMLTCLDSSALLTFYASKRIGQGLSYEKEAA-------MCKAWVSDSYRK 328

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + A   + +GG G+I+E  +  ++R + A    LG
Sbjct: 329 LTALGHQVMGGVGFIDESDLQIYFRRAKAAEQALG 363


>gi|11498569|ref|NP_069797.1| acyl-CoA dehydrogenase (acd-6) [Archaeoglobus fulgidus DSM 4304]
 gi|2649648|gb|AAB90279.1| acyl-CoA dehydrogenase (acd-6) [Archaeoglobus fulgidus DSM 4304]
          Length = 394

 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 46/270 (17%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           + K  +   + LTE   GT+  AI +   K  D  + ++G+K F+S +  +   +++A+ 
Sbjct: 116 IAKGEMEFCMALTEPDAGTNTLAIRTTAVKDGDE-WVINGNKIFISGADRAKGMLIIART 174

Query: 250 EGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             R         +  FL         PN         K G   + T E+ F+N    L  
Sbjct: 175 TPREKAEKKTHGISLFLA------DLPNDAVKVNPIPKHGINYSKTCEVSFNN----LRL 224

Query: 301 DLNVSTGPVED--MKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQP 353
             N    P++     +L  L+   MS +       R+++++A+ Y+++R V    +    
Sbjct: 225 PENALIPPLDGGWYHLLDTLNPERMSFTTAAIGISRLAISKAVEYSKQRKVFADPIGSYQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITK-YWCCK 406
            ++  +A+    +  A  ++F+ A  FD+     E       A    + A I   YW   
Sbjct: 285 GLQFPLAEAYATLECAELMNFKAATLFDQGAHYREVGAAANMAKAVAVEAGIKAVYW--- 341

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                   AM+  GG GY +E  + R +RE
Sbjct: 342 --------AMQTFGGYGYAKEYDVERWWRE 363


>gi|157693692|ref|YP_001488154.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157682450|gb|ABV63594.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 593

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 27/265 (10%)

Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258
           LTE   G+D + A T+     +   Y L+G K W  +S  +D F++ A+++G     F+V
Sbjct: 149 LTEPGSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIV 208

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
               E   P G+     + K+G + ++T  L   +       LLG+     G V    IL
Sbjct: 209 ----EKDFP-GVKTGPEEKKMGIKGSSTRTLILEDAQVPKENLLGE--AGRGHVIAFNIL 261

Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A+ +V   +  +  +  YA +R      +    ++   +A+++  + A  +  
Sbjct: 262 NIGRYKLAVGTVGASKRVIQLSAEYANQRKQFQTPISRFSLIGEKVANMSAKLYAMESAV 321

Query: 374 FRLANSFDEAK---SRSEEAAYARIMAPITKYWC-CKMAPAVIAEAMECI--------GG 421
           +R    F++     S  ++    +I   I +Y   C +   + +E ++ I        GG
Sbjct: 322 YRTVGLFEQRMGLLSEEDQKDGKQIAQSIAEYAIECSLCKVLGSETLDYIADEGVQIHGG 381

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G+++E  + R YR+S  N I  G+
Sbjct: 382 YGFMQEYEVERAYRDSRINRIFEGT 406


>gi|118617330|ref|YP_905662.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
 gi|118569440|gb|ABL04191.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
          Length = 417

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 69/338 (20%), Positives = 136/338 (40%), Gaps = 29/338 (8%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           S  + A++T P + +       S+E      AP     + +    TE  GG+D     ++
Sbjct: 82  STGVQAILTIPILDQ-----YASQEVREAYLAPAVSGKIILAFATTEPHGGSDAFHPETR 136

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL- 275
            ++   G+Y L G KW ++ +P++D F++    E   G   V  L+E   P   C   L 
Sbjct: 137 LRRGPGGLY-LDGAKWHITNAPIADVFLVWCADEATGGMSAV--LVESSWPGVNCSPPLA 193

Query: 276 -----KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
                 + +G+    +V +  ++  G   G+  +  G +   ++L    S   ++  +  
Sbjct: 194 PAGMRTSPVGSIRFDSVAIPKTHVLGAGRGN-EILHGVIGPERLL----SGFGTIGILDQ 248

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L + + ++  R V G  +     ++R I+D+A+      AL+    + +   +S   E+
Sbjct: 249 VLDQMLAFSINRQVRGKPIAPHQHIQRRISDVAVSRQMTIALAHSTLDRYLRDESIDLES 308

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  ++         C        +AM+  G  G  EE  + +   +    S+  G+  AM
Sbjct: 309 AALKLYGMQAGLDGC-------IDAMKLCGSYGLQEEARLYQCALDFLCGSVAGGTEEAM 361

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            L +   L K  +  E+    L++     G   +  LR
Sbjct: 362 RLVIARELAKSHH--ERSSKLLQESRADEGSSNVASLR 397


>gi|254429020|ref|ZP_05042727.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195189|gb|EDX90148.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 364

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 37/265 (13%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV 249
           +T     + LTE R   + ++  +  Q   +G   L+G K  +  P+++    F+++A  
Sbjct: 123 ETFTGAAIALTEPRATFEPSSPATTAQS-GNGQVVLNGVKSLV--PLAEQCEWFVVVAAE 179

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSNTF------GFLLGD 301
           +G V  F+VP+   D +  GL  Q  +  +G RS   AT+ LE           GF   D
Sbjct: 180 KGEVAAFIVPK---DAA--GLTIQS-EAYMGLRSAEPATLTLESVTVPEADRLPGF---D 230

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L+   G       L  +    ++V   +  +  AI Y   R   G  +  +  +   +A+
Sbjct: 231 LDRLLG-------LSRIGQCALAVGCCQAVMEYAIPYVNERKAFGEPIAWRQSVAFMVAN 283

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A++I     +  R A+  ++     +EA  A+++       C + A  +    ++  GG
Sbjct: 284 MAIEIEGMRLMMLRAASRAEQGLDFHKEAYLAQLL-------CMEKAMEIGTNGIQLFGG 336

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
           +G++ +  +   YR   + ++L GS
Sbjct: 337 AGFVRDYPLEMWYRNLRSIAVLHGS 361


>gi|163792887|ref|ZP_02186863.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181533|gb|EDP66045.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 377

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +L+ A+ YA+ R V G  +     ++  +A+  +++ AA  +  R A  +D  +    
Sbjct: 248 RQALSRAVTYAKERVVFGRPIGQNQGIQHPLAENWMELEAAWLMVLRAAALYDAGQPCGA 307

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           EA  A+ +A    +  C+        A+  +GG GY  E  + R  RE
Sbjct: 308 EANSAKYLAAEAAFKACE-------RAVMTLGGMGYAAEYGVERLLRE 348


>gi|254244119|ref|ZP_04937441.1| hypothetical protein PA2G_04957 [Pseudomonas aeruginosa 2192]
 gi|126197497|gb|EAZ61560.1| hypothetical protein PA2G_04957 [Pseudomonas aeruginosa 2192]
          Length = 429

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 43/307 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG---LGLTE 204
           A  L+ P +++A+ +    +P     W P   S E  P     + + S+      L    
Sbjct: 153 AAALLVP-LSAANCIRRWGSPSQQAQWLPAFVSEEGAPLTAIAVNEPSLLFDPQKLATRA 211

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +R G+                Y LSG K   L    +   I+ A+ +     FLV     
Sbjct: 212 RRKGSH---------------YLLSGEKCLVLRGLEASRLIVAAKTDEGPALFLV----- 251

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           + S  G+  +R +  +G ++  T  L   +    +  D  ++    E      +LD A +
Sbjct: 252 EASAKGV-ERRAEPAMGLKAGGTARLRLKSVK--VPADNRLAA---EHFDYRAFLDHAAL 305

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   + +   EA     I Y   R   G  +  +  +   +ADIA+++ A   + +R   
Sbjct: 306 AWCALALGTGEAALDYVIAYCNEREAFGEPISHRQGVAFMVADIAIELDAMRLMVWRACA 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +  +    EA  AR++       C + A  +  +A++ +GG G+ +E    R YR+  
Sbjct: 366 LAERGQPFQREAYLARLL-------CAEKAMKIGTDAVQLLGGHGFTKEHPAERWYRDLR 418

Query: 439 ANSILLG 445
           A +++ G
Sbjct: 419 AVALMAG 425


>gi|297182598|gb|ADI18757.1| acyl-CoA dehydrogenases [uncultured gamma proteobacterium
           HF4000_36I10]
          Length = 380

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 30/247 (12%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L L+E   G+      +Q + +  G Y ++G K F+++       +L+ V    G     
Sbjct: 116 LALSEPGTGSHFYLPQTQIEAVQGG-YRVNGQKTFVTNGNHADSYVLSGVSAGDGMSFSC 174

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKIL 315
            + E GS  G+ +      +G R N++++L  S        D+ VS     G   D    
Sbjct: 175 VVGEHGSA-GMSWGGEWQGMGMRGNSSIQLTLS--------DMQVSQDHLLGNEGDQIWY 225

Query: 316 IYLDSA---IMSVSGMRVSLAEAI------HYARRRHVSGG-ILIDQPVMKRAIADIALD 365
           ++   A   +++++G  + LA         H  RR +   G IL D  V++  I  +  +
Sbjct: 226 VFHVVAPYFLVAMAGTYLGLASTALDIACKHLTRRSYSHNGEILADSQVLQHRIGCLWGE 285

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +A   AL    A  FD+      + A   +MA   K      A  ++ EAM   GG GY 
Sbjct: 286 LAKTRALVHSAAQKFDDGA----DDALPSVMA--AKAEVAGTAVHIVNEAMTLCGGMGYR 339

Query: 426 EERSIAR 432
           +  S+ R
Sbjct: 340 DGGSLQR 346


>gi|326383879|ref|ZP_08205563.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197338|gb|EGD54528.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 396

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258
           + +TE   G+D AA+++   +  D  Y ++G K F+++   +D  ++ A ++  +G   +
Sbjct: 126 MAITEPGFGSDSAAVSTTAVRDGDD-YVINGEKIFVTAGSRADHVVVWATLDKTIGRAAI 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG--DLNVSTGPVEDMK 313
              +   +  G+   RL++K+G +S+ T  + F +       LLG  ++ V TG      
Sbjct: 185 KSFVVPMNSGGVTVARLEHKLGIKSSDTAVVRFEDVRVPSENLLGTPEIQVKTGF---GG 241

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMKR--AIAD---IALD 365
           ++   D+    V+ M V L  A     RR +      I  D+P   +  ++A+   +  D
Sbjct: 242 VMQTFDNTRPVVAAMAVGLGRAALEELRRMLEEAGHEIDYDRPAAAQHASVAEFIRLESD 301

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             ++  L+ R A   D ++  S EA+       ++K    +M   +  +A+E    + + 
Sbjct: 302 WESSWMLTLRAAWMADNSEPNSAEAS-------MSKAKAGRMVTDLTNKAVEIGSTAAFS 354

Query: 426 EERSIARHYRESPANSILLGS 446
           E   + +  R+S    I  G+
Sbjct: 355 ETELLEKWARDSKILDIFEGT 375


>gi|90422548|ref|YP_530918.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104562|gb|ABD86599.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 383

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 21/265 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GC 255
           I + LTE RGG+D A +  + ++  D  Y ++G K  +S+       ++    G V  G 
Sbjct: 120 IAIALTEPRGGSDAANLRLRVERDGDN-YIVNGEKTSISAADQADAAVVFGRTGTVESGA 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             V  LL      G+   R     G R+     L F N        LGD N   G V+ M
Sbjct: 179 HGVTALLIPMDLPGITRSRFDCH-GQRAIGRGSLFFENVRVPGSHRLGDEN--KGFVQVM 235

Query: 313 KILIYLDSAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   +  + I M V  + RV+L E   +   R   G  L     +   +AD+   + AA 
Sbjct: 236 QGFDFSRALIGMQVLAVARVALEETWAHVAERQAFGQPLSAFQGVSHPLADLDTQVEAAR 295

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  +     D     S EAA       + K+W  K+A  V+ E +   G  GY  +R +
Sbjct: 296 LLCLQALWLKDNGAPHSREAA-------MCKWWAPKLAYDVVHECLLTHGHGGY--DRGV 346

Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455
               R        LG G A ++  +
Sbjct: 347 MEQ-RLRDVLGFQLGDGTAQIMKTV 370


>gi|302552880|ref|ZP_07305222.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470498|gb|EFL33591.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
           40736]
          Length = 400

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 30/262 (11%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLA 247
           P   T   IG   +TE  GG+D+A       +     + L+G  KW  ++  +D  ++ A
Sbjct: 131 PAMATMDKIGAFAMTEPLGGSDVAGGMRTTARREGDTWVLNGAKKWIGNATFADYVVVWA 190

Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NV 304
           +   +  V  F+V    E G+P G    +++ KI  R     E+  ++        L N+
Sbjct: 191 RDVDDNHVKGFVV----EKGTP-GFDPVKIEGKIAFRIVENAEITLTDVRVPEANRLRNI 245

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSG----GILIDQPVMKR 357
            +    D+  ++    A ++   + V +     A+ YAR R   G    G  + Q ++ +
Sbjct: 246 DS--FRDVAEILRATRAGVAWQALGVMIGAYELALDYARERKQFGRPIGGFQLVQDLLVK 303

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           ++ +I     A+  +  +LA   D    R E ++ A       K +       V+A + E
Sbjct: 304 SLGNIT----ASWGMLVQLARLQDAGIFRDEHSSLA-------KAFVTSRMREVVAWSRE 352

Query: 418 CIGGSGYIEERSIARHYRESPA 439
             GG+G + E  IAR + ++ A
Sbjct: 353 LFGGNGILLEHDIARFFADAEA 374


>gi|330465036|ref|YP_004402779.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328808007|gb|AEB42179.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 404

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 63/313 (20%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG 224
           TP    +W P+ F     P   A             +E   G+D+ A+ ++    + +D 
Sbjct: 104 TPDQLVEWVPQCFGDVDSPAVAA----------FCSSEPEAGSDVGAMRTRASYDEATD- 152

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278
            + L G K + ++  ++   +++A V+  +G      F+VP     G+P GL   R   K
Sbjct: 153 EWVLRGQKAYATNGGIAGVHVVVASVDPELGSRGQAAFVVP----PGTP-GLSATRKLRK 207

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAIMSVSGM------ 328
           +G R++ T ++         L D+ V      G  E +   +    A    SG       
Sbjct: 208 LGLRASHTADV--------FLDDVRVPGRCLLGGKEALDERLARARAGKRASGQAAMRTF 259

Query: 329 ---------------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                          R +   A+ YA+ R   G  +I    +   +AD+ ++I AA  L 
Sbjct: 260 ELSRPTVGAQALGVARAAYEYALDYAKDRVQFGRPIITNQAVAFTLADMKMEIDAARLLV 319

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R   S+    +R   A    +    +K    ++A +V  +A++ +GG+G++ +  + R 
Sbjct: 320 WR--ASWMGRNNRPFTAGEGSM----SKLKAGEVAVSVTEKAVQLLGGAGFLRDHPVERW 373

Query: 434 YRESPANSILLGS 446
           YR++   +I  G+
Sbjct: 374 YRDAKIYTIFEGT 386


>gi|226294836|gb|EEH50256.1| acyl-CoA dehydrogenase family protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 394

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 33/255 (12%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EG 251
           TE   G D   + ++  K  D  Y +SG K W  S+ ++   ++LA+           EG
Sbjct: 123 TEPNTGLDTLKLRTEAIKDGDS-YRVSGQKIWISSAQVAKRMVLLARTTPLEQVKKPSEG 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
            +  F +     D    GL  +++K K+G R+    E+ F N   T   L+G+       
Sbjct: 182 -LSLFFIDF---DKDAPGLDLRKIK-KMGGRAVDANEVFFDNYRITADTLIGNEG----- 231

Query: 309 VEDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI++Y    +  +++   +    ++L +A  YA+ R V G  +     +   +AD 
Sbjct: 232 -DGFKIVLYGMNAERCLLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQGIAHPLADA 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGG 421
            + + AA   ++     +D +++       A  +     KY   + A      A+   GG
Sbjct: 291 YMKLEAAKLATYHATKLYDASRTDPTITQKAVGVACNSAKYLAAEAAFTACERAVLAHGG 350

Query: 422 SGYIEERSIARHYRE 436
            GY +E  + R+ RE
Sbjct: 351 MGYAQEFHVERYLRE 365


>gi|32563615|ref|NP_871794.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis
           elegans]
 gi|26251617|gb|AAN84837.1| Acyl coa dehydrogenase protein 1, isoform b, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 252

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255
           ++E   G+D  A+ +  ++  D  + +SG K W  +S  +  F++ A  +       + C
Sbjct: 74  ISESGAGSDAFALKTIAKRDGDH-FLISGTKMWITNSGEAQVFVVFANADPSQKYKGITC 132

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           F+V R     S +GL   + ++K+G R+++T ++ F N
Sbjct: 133 FIVER-----SADGLTVDKEEDKLGIRASSTCQVHFDN 165


>gi|304390985|ref|ZP_07372937.1| xylulokinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325868|gb|EFL93114.1| xylulokinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 535

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           S+ D +   +W R  EP +  + HK    + YL+A+L    +M  SV SA    L+    
Sbjct: 141 SVKDPMWKYLWVRDNEPEIYAKVHKWLDVKEYLIARLTGRFVM--SVDSAFATLLLDVRA 198

Query: 170 VHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTE 204
               WA ++  S   +P + AP+  ++ A+G  L E
Sbjct: 199 SRPAWASRLAQSFGVNPRHLAPIVTSATAVGTLLPE 234


>gi|298345429|ref|YP_003718116.1| xylulokinase [Mobiluncus curtisii ATCC 43063]
 gi|315656239|ref|ZP_07909130.1| carbohydrate kinase FGGY [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298235490|gb|ADI66622.1| xylulokinase [Mobiluncus curtisii ATCC 43063]
 gi|315493241|gb|EFU82841.1| carbohydrate kinase FGGY [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 535

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           S+ D +   +W R  EP +  + HK    + YL+A+L    +M  SV SA    L+    
Sbjct: 141 SVKDPMWKYLWVRDNEPEIYAKVHKWLDVKEYLIARLTGRFVM--SVDSAFATLLLDVRA 198

Query: 170 VHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTE 204
               WA ++  S   +P + AP+  ++ A+G  L E
Sbjct: 199 SRPAWASRLAQSFGVNPRHLAPIVTSATAVGTLLPE 234


>gi|293652050|pdb|3M9V|A Chain A, X-Ray Structure Of A Kijd3 In Complex With Dtdp
          Length = 439

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 28/275 (10%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRL----LEDGSPNGLCYQRLKNK 278
           G + LSG K  +S +P+   F++ A+ +G  G    PRL    +   +P G       + 
Sbjct: 161 GGWLLSGRKTLVSMAPVGTHFVINARTDGTDGP---PRLASPVVTRDTP-GFTVLDNWDG 216

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--GMRVSLAEAI 336
           +G R++ TV++ F +    +  D  +   PV      +     + SVS  G+ V +A+A 
Sbjct: 217 LGMRASGTVDIVFDDCP--IPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAA 274

Query: 337 HYARRRHVSGGILIDQPVMKRA-----IADI-----ALDIAAATALSFRLANSFDEAKSR 386
           +       +   L  +P   +A     +A+I     AL   A +AL+   A S D +   
Sbjct: 275 Y-----DTAVAALERRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDM 329

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E            K    ++AP ++++ +  +GG+ Y     +AR  R+  A   +   
Sbjct: 330 DERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPY 389

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
                +D L+    G        ST  +  G +GK
Sbjct: 390 AYVDAVDFLSAQALGIERDNNYMSTWAKRSGGNGK 424


>gi|118467571|ref|YP_886806.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118168858|gb|ABK69754.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 399

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 32/245 (13%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D A + ++  +  D  + L+G K W  +  ++D  ++ A+ +  +  F+V
Sbjct: 144 FGLTEPDHGSDPAGMRTRATRSGDD-WILTGTKMWITNGSVADVAVVWARTDEGIRGFVV 202

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P         G     +K+K+  R++ T EL      G  L D     G       L  L
Sbjct: 203 PT-----DTPGFTANTIKSKMSLRASVTSELVLD---GVRLPDSARLPGATSLGAPLRCL 254

Query: 319 DSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAA 368
           + A   +        R  L  A+ YA  R        D+P+      ++ +AD+ L+   
Sbjct: 255 NEARFGIVFGALGAARDCLETALAYACSRE-----QFDRPIGGFQLTQQKLADMTLEYGK 309

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L+  L    D  +   E+ +  ++          + A  +   A   +G SG   E 
Sbjct: 310 GFLLALHLGRQKDAGELAPEQVSLGKLNN-------VREAIEIARTARTVLGASGITGEY 362

Query: 429 SIARH 433
            + RH
Sbjct: 363 PVMRH 367


>gi|295688663|ref|YP_003592356.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295430566|gb|ADG09738.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 388

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 66/271 (24%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252
            G+TE   GTD  +I++  ++  D  Y ++G K W   +  SD  ++LA+   +      
Sbjct: 123 FGVTEPTAGTDTTSISTFARRDGD-TYVINGQKVWTSRAEHSDLMVLLARTTPKDQVARK 181

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295
              +  FLV      G  NGL  + +   +   ++AT E+ F N               F
Sbjct: 182 ADGLSVFLVDMRAAKG--NGLTIKPIATML---NHATTEVFFDNLVIPADSLIGEEGKGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYL----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
            ++L  +N         +ILI      D+A +        + +A  YA  R V G     
Sbjct: 237 RYILDGMNAE-------RILIGAECLGDAAWL--------IGKARDYANSRVVFG----- 276

Query: 352 QPVMKRAIADIALDIAAATALSFRL-----ANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           +P+ +       +  A A A + RL     A  +D  +   E+A   +++A    +    
Sbjct: 277 RPIGQNQGVQFPIARAYAQAHAARLTIYDAAARYDAGQPCGEQANIGKMLASEASWAAAD 336

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           M        ++  GG G+ EE  I R +RE+
Sbjct: 337 M-------CLQTHGGFGFAEEYDIERKFRET 360


>gi|52548941|gb|AAU82790.1| acyl-CoA dehydrogenases [uncultured archaeon GZfos1C11]
          Length = 134

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 7/109 (6%)

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R  S   + +   ++  +AD+A+++ AA  L+++ A+  D+ +  ++        A
Sbjct: 19  YAKERRQSSQPIANFQAIQFMLADMAVEVEAARLLTYKAAHLADKGEKITK-------YA 71

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            I K +  ++A      A++  GG G  +E    R+YR++   SI +G+
Sbjct: 72  SIAKLYASEVAQRAATNAVQIHGGYGCTKECPAERYYRDAKILSIAVGT 120


>gi|94313383|ref|YP_586592.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93357235|gb|ABF11323.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 390

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E    F ++L  LN         +ILI    A  SV   R +L  A  YAR R V G  +
Sbjct: 233 EEGRGFEYILHGLNPE-------RILI----AAESVGLGRAALEAATRYARERTVFGRPI 281

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +A   + + AA  + ++ A  +D  K    EA  A+ +A    +  C+ A 
Sbjct: 282 GQNQGIQHPLAQAWMALEAADMMVWKAAWLYDNGKPCGAEANAAKYLAAEAAHQACQTA- 340

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437
                 +  +GG GY  E  + R+ RES
Sbjct: 341 ------VLTLGGMGYAREYHVERYLRES 362


>gi|189195774|ref|XP_001934225.1| acyl-CoA dehydrogenase fadE12 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980104|gb|EDU46730.1| acyl-CoA dehydrogenase fadE12 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 411

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPV-MKRAIA----DIALDIAAATALSFRLANSFDEAKS 385
           +L+ A  YAR R V      ++P+ M + IA    D  + + AA   ++  A  +DE++ 
Sbjct: 275 ALSRAAEYARTREV-----FNRPIGMNQGIAHPLADAYMALEAAKLATYHAAQLYDESQQ 329

Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                 +  +   A   KY   + A      A+   GG GY EE  + R +RES
Sbjct: 330 EGSTVTHDEVGVAANSAKYLAAEAAFRACERAVLTHGGMGYAEEYDVERWFRES 383


>gi|171466616|gb|ACB46491.1| FAD-dependent oxidoreductase [Actinomadura kijaniata]
          Length = 437

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 28/275 (10%)

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRL----LEDGSPNGLCYQRLKNK 278
           G + LSG K  +S +P+   F++ A+ +G  G    PRL    +   +P G       + 
Sbjct: 159 GGWLLSGRKTLVSMAPVGTHFVINARTDGTDGP---PRLASPVVTRDTP-GFTVLDNWDG 214

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--GMRVSLAEAI 336
           +G R++ TV++ F +    +  D  +   PV      +     + SVS  G+ V +A+A 
Sbjct: 215 LGMRASGTVDIVFDDCP--IPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAA 272

Query: 337 HYARRRHVSGGILIDQPVMKRA-----IADI-----ALDIAAATALSFRLANSFDEAKSR 386
           +       +   L  +P   +A     +A+I     AL   A +AL+   A S D +   
Sbjct: 273 Y-----DTAVAALERRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDM 327

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E            K    ++AP ++++ +  +GG+ Y     +AR  R+  A   +   
Sbjct: 328 DERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPY 387

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
                +D L+    G        ST  +  G +GK
Sbjct: 388 AYVDAVDFLSAQALGIERDNNYMSTWAKRSGGNGK 422


>gi|29827888|ref|NP_822522.1| glutaryl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29604989|dbj|BAC69057.1| putative glutaryl-CoA dehydrogenase [Streptomyces avermitilis
           MA-4680]
          Length = 403

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 17/245 (6%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCF 256
             +TE  GG+D+A       +     + L+G K W  ++  +D  ++ A  + +G+V  F
Sbjct: 145 FAMTEPLGGSDVAGGMRTTARRDGENWVLNGAKRWIGNATFADLVVVWARDEADGKVKGF 204

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +V    E G+P G    +++NKI  R     E+  ++        L       +  +IL 
Sbjct: 205 VV----EKGTP-GFSPVKIENKIAFRIVENAEITLTDVKVPEANRLQRIDSFRDVAEILR 259

Query: 317 YLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              S +   ++  M  +   A+ YA+ R   G  +    +++  +     +I A   +  
Sbjct: 260 ATRSGVAWQALGVMLGAYELALGYAKERKQFGRPIARFQMVQDLLVKSLGNITACWGMLV 319

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +LA   D    R E ++ A       K +       V+A   E  GG+G + +  IAR +
Sbjct: 320 QLARLQDAGVFRDEHSSLA-------KAFVTSRMREVVAWCREIFGGNGIVLDYDIARFF 372

Query: 435 RESPA 439
            ++ A
Sbjct: 373 ADAEA 377


>gi|241338844|ref|XP_002408432.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215497346|gb|EEC06840.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 416

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 20/259 (7%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D A++++  ++  D  Y L+G K F+S S  SD ++++ +  G     +   
Sbjct: 161 LTEPGSGSDAASLSTTAKRDGDD-YILNGSKAFISGSGTSDIYVIMVRTGGPGPKGISAV 219

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT--VELE-----FSNTFGFLLGDLNVSTGPVEDMK 313
           ++E G+  GL + + + K+G  +  T  V LE      +N  G        +   ++  +
Sbjct: 220 VVEKGT-RGLSFGKKEKKLGWNTQPTRMVILEDCRVPVANRLGEEGQGFQFAMKGLDGGR 278

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I    A  S+     S+  AI + + R   G  L      +  +A +A  +  +  + 
Sbjct: 279 VNI----ASCSMGAAAASIDIAIEHMKVRKQFGKPLAAFQHHQFLLAKMATALQTSRLIV 334

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A S D       ++ Y   +  + K    +    V  +A++ +GG G+I+E  I ++
Sbjct: 335 RKAAESIDL------DSPYKTALCAMAKLHGTEAGFKVTNQALQMMGGYGFIKEYPIQQY 388

Query: 434 YRESPANSILLGSGNAMVL 452
            R+  A+ I+ G+   M L
Sbjct: 389 LRDLRAHLIIEGTNEMMQL 407


>gi|260060664|ref|YP_003193744.1| acyl-coenzyme A oxidase I [Robiginitalea biformata HTCC2501]
 gi|88784794|gb|EAR15963.1| acyl-coenzyme A oxidase I, putative [Robiginitalea biformata
           HTCC2501]
          Length = 760

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 17/120 (14%)

Query: 324 SVSGMRVSLAEAIHYARRRH-------VSGGILIDQPVMK-RAIADIALDIAAATALSFR 375
           +++G R  L+ A+ YA RR        V   +++D P  + R +  +A       AL+ R
Sbjct: 425 ALAGARFGLSIAVRYALRRRQFNDAARVQEDLIMDYPSHQVRLLPAVASSYVYQAALT-R 483

Query: 376 LANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           L  S+D A    +R  EA  A + A +T++     A   + E  E  GG GY+ E  I +
Sbjct: 484 LLKSYDGADGTDTRQLEAGVAGLKALVTEF-----ADRTLQECREACGGKGYLLENRIGQ 538


>gi|226943201|ref|YP_002798274.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718128|gb|ACO77299.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 383

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 30/258 (11%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----C 255
           LTE + G++   + ++ +   D  + L G K F+S+       I+ A  +  +G      
Sbjct: 126 LTEPQAGSEAHNLRTRAELAGD-RWILDGAKQFVSNARRAKLAIVFAVTDPELGKKGLSA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308
           FLVP         G   +R ++K+G R++ T  +  S       N  G     L ++   
Sbjct: 185 FLVPT-----DTPGFVVERSEHKMGLRASDTCAVNLSGCSIPAENLLGERGKGLAIALSN 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +E  +I I    A  ++   R +   A+ YAR R   G  + +   +   +AD+   + A
Sbjct: 240 LEGGRIGI----AAQALGIARAAFEAALAYARERVQFGKPICEHQSIANLLADMHTRLNA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L    A           EA+ A++ A        +MA  V + A++  GG GY+E+ 
Sbjct: 296 ARLLILHAARLKGAGLPCLSEASQAKLYAS-------EMAERVCSSAIQIHGGYGYLEDY 348

Query: 429 SIARHYRESPANSILLGS 446
            + R+YR++    I  G+
Sbjct: 349 PVERYYRDARITQIYEGT 366


>gi|226508436|ref|NP_001150306.1| LOC100283936 [Zea mays]
 gi|195638260|gb|ACG38598.1| glutaryl-CoA dehydrogenase [Zea mays]
          Length = 436

 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 47/240 (19%), Positives = 107/240 (44%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259
           LTE   G+D +++ +   K   G +     +W  +S  +D  ++LA+     ++  F+V 
Sbjct: 172 LTEPNYGSDASSLRTLATKAPGGWHIDGQKRWIGNSTFADVLVVLARNADTQQLNGFIV- 230

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
                G+P GL   +++NKIG R     ++  +  F   + D +   G    +D+  ++ 
Sbjct: 231 ---RKGAP-GLKATKIENKIGLRMVQNGDIVLNKVF---VPDEDRLPGINSFQDISKVLA 283

Query: 318 LDSAIMSVSGMRVSLA--EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++   + +S+   +  H Y + R   G  L    + +  +A +  ++ +   + +
Sbjct: 284 ISRIMVAWQPVGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLARMLGNVQSMVLVGW 343

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  K     A+       + K W  + A  V++   E +GG+G + +  +A+ +
Sbjct: 344 RLCKLYESGKMTPGHAS-------LGKAWNSRTAREVVSLGRELLGGNGILADFLVAKAF 396


>gi|326482943|gb|EGE06953.1| hypothetical protein TEQG_06006 [Trichophyton equinum CBS 127.97]
          Length = 439

 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 25/254 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------- 249
            G+TE   G +   + +   K  D     S H W  S+ ++   I+LA+           
Sbjct: 165 FGVTEPNTGLETLKLRTVAVKDGDSYRLTSEHSWISSAQVAQKMILLARTTPVEEVNKPS 224

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           EG +  F +     D +  GL  +++K K+G RS    E+ F + +      L  + G  
Sbjct: 225 EG-LSLFFIDF---DRAAPGLDLRKIK-KMGGRSVDANEV-FFDEYRIPADSLIGNEG-- 276

Query: 310 EDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI+++    +  +++   +    V+L +A  YA+ R V G  +     +   +A   
Sbjct: 277 EGFKIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQAIAHPLAAAY 336

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           + + AA   ++     +DE+++ S        +     KY   + A A    A+  +GG 
Sbjct: 337 MSLEAAKLATYHATKLYDESRNDSSITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGM 396

Query: 423 GYIEERSIARHYRE 436
           GY +E  + R+ RE
Sbjct: 397 GYAQEYHVERYLRE 410


>gi|164422641|ref|XP_958652.2| hypothetical protein NCU09885 [Neurospora crassa OR74A]
 gi|157069757|gb|EAA29416.2| hypothetical protein NCU09885 [Neurospora crassa OR74A]
          Length = 366

 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 53/307 (17%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +   +A   TP   ++  P I S               + +  G+TE   G D   +
Sbjct: 59  NVYATQPLAKFGTPEQLEETIPNIIS-------------GKLRVCFGVTEPNAGLDTLRL 105

Query: 215 TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-GLCY 272
            +  +K  DG Y +SG K W   + ++D  ++LA+            L E   P+ GL  
Sbjct: 106 ETLAKKQDDGSYSVSGQKIWITCAQVADKMLLLARTTA---------LDEVKKPSEGLSL 156

Query: 273 ---------QRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-L 318
                     RLK     K+G R+    E+ F N   + +   ++     +  KI+++ +
Sbjct: 157 FCIDLNRGDHRLKVSKIKKMGGRAVDANEVFFEN---YPIPGESLIGKEGQGFKIILHGM 213

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALS 373
           ++    ++G  + L  A       +    ++  +P+     +   +AD+ + + AA   +
Sbjct: 214 NAERCLLAGEALGLGYAALGKAAAYARERVVFQRPIGQNQGIAHPLADVYMRLEAAKHAT 273

Query: 374 FRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +  A  +D +K+    R EE   A   A   KY   + A A    A+   GG GY  E  
Sbjct: 274 YHAARLYDASKTDGSIRQEEVGVACNSA---KYLAAEAAFAACERAVLTHGGMGYAVEYD 330

Query: 430 IARHYRE 436
           + R++RE
Sbjct: 331 VERYFRE 337


>gi|89891515|ref|ZP_01203020.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89516289|gb|EAS18951.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 602

 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257
           LTE   G+D  +  ++ +   DG  Y ++G K W  ++   + F++ A++E    +  F+
Sbjct: 150 LTEPGAGSDANSGKTKAELTEDGKHYKINGQKMWISNAGFCNVFVVFARLEDDKNITGFI 209

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-- 315
           V    E+   NG+     ++K+G  S++T ++ F++    L+   N+  G  E  KI   
Sbjct: 210 V----ENDPSNGISMGEEEHKLGIHSSSTRQVFFNDC---LVPVENMLAGRGEGFKIAMN 262

Query: 316 ------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                 I L +A +      ++L  A +YA  R      +     +++ IA++A +    
Sbjct: 263 ALNVGRIKLAAACLDAQRRVITL--ATNYANEREQFKTPIAKFGAIRKKIAEMATNAYVG 320

Query: 370 TALSFRLANSFDE-AKSRSEEAA 391
            + S+R A   +     R EE A
Sbjct: 321 ESASYRAAKDIENRIHLRQEEGA 343


>gi|297204614|ref|ZP_06922011.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
 gi|297148735|gb|EFH29096.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 374

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 12/248 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLV 258
           L LTE  G  D   I     +   G + L+G K ++    ++D  ++ A+    +    V
Sbjct: 124 LALTEDSGHWDEQGIGLTAVRDETGAWQLTGVKAYVPDGHLADLLLVAARTPSGISLLAV 183

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E     GL    L      R  A +  EF++T   LLG    +   +E       +
Sbjct: 184 ----ETADAPGLTRTPLPTLDQTRKQARI--EFADTPARLLGPEGTAWPALERTLATAAV 237

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   V G   +L  A+ YA+ R   G  +     +K   AD+ ++I +A + ++    
Sbjct: 238 LLAAEQVGGAAAALDAAVAYAKIREQYGRPIGSFQGIKHKCADMLMEIESARSAAYGGLW 297

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE      +     I A + + +C +    V A+ ++  GG G+  E     +++ + 
Sbjct: 298 ALDEG-----DGTEITIAAALAQAFCSEAFTKVAADNIQVHGGIGFTWEHPAHLYFKRAK 352

Query: 439 ANSILLGS 446
           ++ +LLG+
Sbjct: 353 SSEVLLGT 360


>gi|119873337|ref|YP_931344.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           islandicum DSM 4184]
 gi|119674745|gb|ABL89001.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum islandicum DSM
           4184]
          Length = 405

 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 28/257 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+G TE +GG+D+A+  ++  K   G++ L G K  ++   +   I+     G V    
Sbjct: 122 VGIGSTEPQGGSDVASFQTKAVK-EGGLWKLYGEKNMVTGVST---ILNLPYGGGVVAIT 177

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--FGFLLGDLNVSTGPVEDMKIL 315
               LED       +  L  + G  +      ++      G   G L +   PVED+ +L
Sbjct: 178 RTGRLEDRHKGITVFLALLKRRGRVTPGFTHRDWDEIGRHGLSTGYLTLDGLPVEDVFML 237

Query: 316 IYLDSAI----------------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L+                    S+   R  L   + + ++R V G  +     +    
Sbjct: 238 GELNGGFKIAMEGFNLARTIIGAASIGATRWLLDRGLEWIKQRVVFGKPIASYQSISFKF 297

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEA 415
           A++   + AA    +R A   D  +  S + A+            KY    +A     E 
Sbjct: 298 AELYARLEAARLAVYRAAWVAD--RFYSGDTAFTIHDVATAGATAKYLSVSLAVEAALEV 355

Query: 416 MECIGGSGYIEERSIAR 432
           M+  GG+ Y +E +IAR
Sbjct: 356 MKWFGGASYFKETNIAR 372


>gi|328721038|ref|XP_003247197.1| PREDICTED: peroxisomal acyl-coenzyme A oxidase 3-like isoform 3
           [Acyrthosiphon pisum]
 gi|328721041|ref|XP_003247198.1| PREDICTED: peroxisomal acyl-coenzyme A oxidase 3-like isoform 4
           [Acyrthosiphon pisum]
          Length = 714

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E  A +    PI   W C+ A   I E  E  GG GY++   ++     + AN    G 
Sbjct: 419 TEIHAISSCTKPIAA-WTCRDA---IQECREACGGHGYLKAAGLSELRNANDANCTYEGD 474

Query: 447 GNAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDK 498
            N +V    N LL   TNL     S  +  LG+    K V TIL +   L + D+
Sbjct: 475 NNVLVQQTSNWLLNIWTNLLNGNTSCCDTPLGTIEFLKDVKTILSEKFKLSRVDE 529


>gi|319951474|ref|ZP_08025283.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319434866|gb|EFV90177.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 468

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + RH  G  +  +  +  A+AD+A ++     +++R A+  ++  S + EAA AR +A
Sbjct: 364 YVKERHAFGEPIAHRQAVAFAVADMATELDGMRLVTWRGASRAEQGLSFAREAALARKIA 423

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                        +  + ++ +GG G+ +E  + R YR+
Sbjct: 424 -------ADKGMKIGLDGVQLLGGHGFTKEHPVERWYRD 455


>gi|119475627|ref|ZP_01615980.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119451830|gb|EAW33063.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 423

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 23/257 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           + +  +    G+TE   G+D   + +  ++  DG        W      +   ++ A+  
Sbjct: 143 LAEGKLGFAFGITEPEHGSDATYMETHAERDGDGWVINGCKTWNTGIHKAPYDLIFARTS 202

Query: 251 GRVG------CFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           G+ G       FLVP   E      + +   +    G  S   V +     FG     L 
Sbjct: 203 GKPGDGRGITAFLVPMKSEGFKVEEMLWTFNMPTDHGTVSLTNVRVSDDAIFGGEGRGLG 262

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           V      + +I      A  S+   +  + E+I+YA+ R   G  L     ++  + ++ 
Sbjct: 263 VVQHFFNENRIR----QAASSLGAAQFCINESINYAKHRSPFGKPLASNQGIQFPLVELQ 318

Query: 364 LDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                  AL  + A   DE  A S S++ +       +  YW  ++       AM+  GG
Sbjct: 319 TQCEMLRALIHKTAWQMDEYGAFSVSDKVS-------MCNYWSNRLCCEAADRAMQVHGG 371

Query: 422 SGYIEER---SIARHYR 435
            GY   +    I RH+R
Sbjct: 372 LGYSRHKPFEHIYRHHR 388


>gi|170732989|ref|YP_001764936.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169816231|gb|ACA90814.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 388

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 49/261 (18%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   +T+Q ++  D  Y LSG K W  ++ +++  +++A+         +
Sbjct: 124 FAVTEPDAGLDTTHLTTQARRDGDH-YVLSGRKIWISTAQVANKMLIIARTTP------L 176

Query: 259 PRLLEDGSPNGLCYQRLK---------NKIGNRSNATVELEFSN--------------TF 295
            ++ +      L Y  L           K+G ++  +  L   N               F
Sbjct: 177 DQVAKPTDGLSLFYTDLDRSRVEVREIEKMGRKAVDSNMLFIDNLRVSRDDLIGNEGDGF 236

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            +LL  LN         +ILI  ++  +  + +R     A  YA  R V G  +     +
Sbjct: 237 HYLLHGLNPE-------RILIAAEAIGLGQAALR----RATQYACERVVFGRPIGQNQSI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A   + + AA  +  + A  +D  +S   EA  A+ +     +  C+ A A     
Sbjct: 286 QHPLAQAWMQLEAAWLMVMKAATRYDAGQSCGAEANAAKYLGAEAAFQACQTAIATH--- 342

Query: 416 MECIGGSGYIEERSIARHYRE 436
               GG GY +E  + R+ RE
Sbjct: 343 ----GGMGYAKEYHVERYLRE 359


>gi|115525618|ref|YP_782529.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115519565|gb|ABJ07549.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 411

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 9/106 (8%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-- 388
           +L++ +   + R   G  +I+  + ++ IA+   DI     L  + A+  D+  +++   
Sbjct: 279 ALSKMVRRLQSRTAFGKKIIEYSIWEQRIAEARTDIEMTRLLCLKAADMMDKVGNKTAQL 338

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           E A  ++ AP       KMA  +I +A++  GG+G  ++  +A+ Y
Sbjct: 339 EIAMIKVAAP-------KMALKIIDDAIQAFGGAGVSDDAGLAKDY 377


>gi|323359284|ref|YP_004225680.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323275655|dbj|BAJ75800.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 387

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           I L S    ++   + LA    +ARR   SG    + P ++  IAD+AL   A  AL  +
Sbjct: 242 ILLASVYTGIARRALDLAVETAHARRSKKSGTTYANDPDIRWRIADMAL---AYDALPPQ 298

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA    +  + ++       +    K+     A AV+ +A+   GGS Y     ++R YR
Sbjct: 299 LAALSTDVDTLADHGGRWFSLLAGVKHRAVSTAKAVVDDAILVGGGSAYSAHSELSRLYR 358

Query: 436 E 436
           +
Sbjct: 359 D 359


>gi|304311099|ref|YP_003810697.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796832|emb|CBL45044.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 436

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 125/294 (42%), Gaps = 25/294 (8%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A+++  M        W        Y P   A +++  +   + + E +   +   +++ 
Sbjct: 160 AAAILTPMGVANALTQWGNAAQQERYLP---AFLEEKPLIATMAINEPKALFNPLQLSTT 216

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRL 275
             + S+G Y L+G K   L    ++ F++ AQ+EG+    FLV     + +  G+     
Sbjct: 217 ATRNSNG-YLLNGEKNLVLLGEKAELFLVAAQLEGKGPSLFLV-----EANATGISIAN- 269

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              +G +  ATV L+F N       LLGD + +    ++   L  L     ++     +L
Sbjct: 270 GPAMGLKPAATVSLKFENVQLEPNALLGDESFN---YQNFLNLCRLGWCSAALGTAAAAL 326

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              I YA  R   G  +  +  +   +A+I +++     +  R       A +R+E    
Sbjct: 327 EYTITYANERVAFGEPISHRQSVAFMVANIGIELDGMRMMVQR-------AVARAERGMD 379

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A + + +C   A  +   +++ +GG G+ +E  + R YR+  A +++ G+
Sbjct: 380 FQREAYLARLFCADKAMEIGTNSVQLLGGHGFTKEHPVERWYRDLRAIALVEGN 433


>gi|288916907|ref|ZP_06411279.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288351616|gb|EFC85821.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 150

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  AI Y + R   G  + D   ++  +AD+A+ I AA  + +  A     A++   E 
Sbjct: 26  ALDAAIGYVKERRQFGRPIADNQGVQFMLADMAMKIEAARHMVYVAA-----ARAERGEP 80

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               I A   K +   +A  V  +A++  GG+GY  +  + R  R++    I  G+
Sbjct: 81  NLGFITAA-AKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMRDAKITQIYEGT 135


>gi|157101250|dbj|BAF79956.1| receptor-like kinase [Marchantia polymorpha]
          Length = 609

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           ++E  PA + ++ R       CS   +   PV++K    +   R    AQL      SPS
Sbjct: 495 RIEHTPAIYMIIERLAELAFACSAPTKRDRPVMKKAQEALWNIRKEYQAQLSNDPARSPS 554

Query: 156 VTSASMVALMTTPRVHKDWAPKIFS-REYDPTNKAPMQKTS 195
            TS +  A  + P      +P   S R   PT  +P  + S
Sbjct: 555 HTSRTSRATFSIPETDSRTSPSFLSPRLASPTRSSPNSRLS 595


>gi|320032216|gb|EFW14171.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 424

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  + + +        KW  ++  +D +   A   G  G   + 
Sbjct: 151 LGITEPDAGSDVSGIKTTAKGVGNKYIVNGAKKWITNAIFAD-YCTAAVRTGGPGRNGIS 209

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+      G+  +R+ N   N S +T  LEF +               F +++ + N  
Sbjct: 210 LLIIPLKSKGVTRRRMYNSGVNASGSTF-LEFDDVEVPAENLIGKENQGFKYIMSNFNPE 268

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + + S+ + +S  RV + +A +YA  R   G  LI   +++   +     
Sbjct: 269 R---------LGMASSCIRLS--RVCVEDAYNYAITRETFGKPLIYNQIIRAKFSKFGQL 317

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +         E     + A + K    +    V  EA + +GG+GY
Sbjct: 318 IEPCQAFLEQLAYTIQLNAKTGREIDVGGMTA-LLKVMSTRCLEKVCREAQQILGGAGY 375


>gi|159041137|ref|YP_001540389.1| acyl-CoA dehydrogenase domain-containing protein [Caldivirga
           maquilingensis IC-167]
 gi|157919972|gb|ABW01399.1| acyl-CoA dehydrogenase domain protein [Caldivirga maquilingensis
           IC-167]
          Length = 406

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 33/260 (12%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSD----AFIMLA--- 247
           IG+  TE +GG+D+A+   + ++ SD  + L G K  ++     ++D     F+ +A   
Sbjct: 122 IGIASTEPQGGSDVASTRLEARR-SDDSWSLYGEKNIVTGVSLIINDMDYGGFVTIARTA 180

Query: 248 --QVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
             +   R    L+  + +DG   NG  Y   ++ IG R  AT  + F+       + LG+
Sbjct: 181 PPETRHRGLTTLLALVKKDGVVLNGFDYGSYED-IGRRGLATNYIRFNGLTVKESYTLGE 239

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----M 355
           +N         KIL+   D A + ++   + +   +    R  +   ++ ++P+     +
Sbjct: 240 VNAG------FKILMEGFDIARVLIAAASIGVTRWLLDQSRDWIKSRVVFNKPIASYQSI 293

Query: 356 KRAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
               A++A  +  A  L+++   L + +      S +         + K    ++A    
Sbjct: 294 SFKYAELATRLEQARLLTYKAAWLTDRYFILNDSSVDILTVATFNAMAKMTAVELAVETA 353

Query: 413 AEAMECIGGSGYIEERSIAR 432
            EAM   GG+ Y +E +IAR
Sbjct: 354 LEAMRWFGGASYFKESNIAR 373


>gi|121611220|ref|YP_999027.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555860|gb|ABM60009.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 424

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 109/288 (37%), Gaps = 52/288 (18%)

Query: 177 KIFSREYDPTNKA----PMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGH 231
           +  +R  D  NKA    P+ +  +     +TE     +D   I ++ ++  D  Y ++GH
Sbjct: 116 ETIARYGDEANKARWLVPLLEGRIRSAFAMTEPEVASSDATNIATRIERQGDE-YVINGH 174

Query: 232 KWFLSS---PMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLCYQRLKNKIG-- 280
           KW++S    P    F+ + + +        PR      +L      G+   R  N +G  
Sbjct: 175 KWWISGAADPRCAVFVTMGKTDPE-----APRHSQQSMVLVPADSQGITIVRPLNVMGYD 229

Query: 281 NRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +  +  VE+ F N              GF +    +  G +     L+ L    + +   
Sbjct: 230 DAPHGHVEMTFENVRVPVSSILLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCR 289

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-- 386
           R +          R   G  +  Q V +  IA+    I  A  L+ + A   D A ++  
Sbjct: 290 RATA---------RTAFGKTVAQQTVTQERIAEARCKIDMARLLTLKAAWLMDMAGNKVA 340

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             + A  +++AP        MA  VI  AM+  GG G  ++  +A  Y
Sbjct: 341 KTDIAMIKVVAP-------GMACQVIDWAMQVHGGGGMCDDFPLAHAY 381


>gi|301631641|ref|XP_002944906.1| PREDICTED: hypothetical protein LOC100489297 [Xenopus (Silurana)
           tropicalis]
          Length = 757

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI + ++R   G  +    +++  +AD   +I AA ++    A     A+ R E+ A   
Sbjct: 633 AIAHTQQRRQFGQTVGSFQLVQALVADSCTEIFAAKSMILEAAR----ARDRGEDVA--- 685

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNAMVLD 453
           + A + KY+  +M   V   A++  GGSGY+ + S I R++R+     +  G+     L+
Sbjct: 686 LNASMCKYFASEMCGRVADRAVQMFGGSGYVADFSPIERYFRDVRLFRLYEGTSQIHQLN 745

Query: 454 VLNL 457
           +  L
Sbjct: 746 IAKL 749


>gi|193587201|ref|XP_001947058.1| PREDICTED: peroxisomal acyl-coenzyme A oxidase 3-like isoform 1
           [Acyrthosiphon pisum]
 gi|328721036|ref|XP_003247196.1| PREDICTED: peroxisomal acyl-coenzyme A oxidase 3-like isoform 2
           [Acyrthosiphon pisum]
 gi|328721043|ref|XP_003247199.1| PREDICTED: peroxisomal acyl-coenzyme A oxidase 3-like isoform 5
           [Acyrthosiphon pisum]
          Length = 687

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E  A +    PI   W C+ A   I E  E  GG GY++   ++     + AN    G 
Sbjct: 392 TEIHAISSCTKPIAA-WTCRDA---IQECREACGGHGYLKAAGLSELRNANDANCTYEGD 447

Query: 447 GNAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDK 498
            N +V    N LL   TNL     S  +  LG+    K V TIL +   L + D+
Sbjct: 448 NNVLVQQTSNWLLNIWTNLLNGNTSCCDTPLGTIEFLKDVKTILSEKFKLSRVDE 502


>gi|111222522|ref|YP_713316.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111150054|emb|CAJ61749.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 386

 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 12/255 (4%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           + ++E   G+D+  I +   +  D  + ++G K F+S+ + +D  ++  + +   G   +
Sbjct: 124 IAMSEPGAGSDLRGIRTTALRDGDH-FVVNGAKTFISNGLLADLVVVAVKTDPGAGRGSL 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315
             L  + +  G    R  +K+G R+  T EL F++       LLG+ +     +      
Sbjct: 183 SLLAVERATPGFERGRKLDKVGLRAQDTAELFFNDARVPAANLLGEEHRGLHYLMRNLAA 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ SV+  R +      Y R R   G  +      +  +A +     A  AL   
Sbjct: 243 ERLSIAVGSVASARRAQELTRQYVRSRTAFGTTIGSFQNTRFVLAALHARTLAVQALVDG 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +        E+AA A+++A   ++         +   ++  GG G++EE  IAR YR
Sbjct: 303 CVQARIAGTLTPEDAAAAKLLATELEF-------DAVDAGVQLHGGYGWMEEYPIARMYR 355

Query: 436 ESPANSILLGSGNAM 450
           +     I  GS   M
Sbjct: 356 DVRITRIFGGSSEIM 370


>gi|296169402|ref|ZP_06851025.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895952|gb|EFG75644.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 378

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 43/290 (14%)

Query: 181 REYDPTNKAPMQKTSVAI-------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           RE  P   A  +  + AI       G G    R  T+  A+T  G KI    + + GH  
Sbjct: 114 RELLPEIAAGARTVTTAINEPGCVDGFGAVAMRAATNGDAVTLSGTKI----HVIDGHS- 168

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
                 +D  ++LA   G       P L L DG+  GL   R++     R  AT+  +  
Sbjct: 169 ------ADTLLVLALPPGDSA---EPALYLVDGNAVGLTRTRVETLDITRPLATLTFDAV 219

Query: 293 NTFGFLLGDLNVSTGPVED-MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           +    L G   V+  P+   + +   L +A M V G   ++  ++ YA+ RH     +  
Sbjct: 220 SAVP-LAGAHGVA--PIRRALDVAKTLLAAEM-VGGTEGAMTMSVEYAKVRHQFNRPIGS 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARIMAPITKYWCCK 406
              +K   A++A+++ +A A++   A+     S D AK+     A A      T  W  +
Sbjct: 276 FQAIKHRCAEMAIELDSARAVTLYAAHLAAEESADLAKAAPIAVATAAAGFDFTASWNVQ 335

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +            GG G+  E     +YR + A+ +LLGS     L+V +
Sbjct: 336 IH-----------GGIGFTWEHDAHLYYRRAKADRVLLGSVREQWLEVAD 374


>gi|218671479|ref|ZP_03521149.1| acyl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 299

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 23/187 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254
           G  LTE + G+D + + ++ +   D  Y + G K F++S  +   I++  V     G+ G
Sbjct: 120 GFALTEPQAGSDASNLKTRARLDGDH-YVIDGAKQFITSGKNGNVIIVFAVTDPDAGKKG 178

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305
              F+VP         G    R++ K+G  S  T ++ F++         G       ++
Sbjct: 179 ITAFIVPT-----ETPGYEVIRVEEKLGLHSTDTCQIAFNSMRIPSELRLGAEGEGYRIA 233

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +E  +I I    A  +V   R +   A  YAR R   G  + +   +   +AD+A+ 
Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERTAFGKPIFEHQAVAFRLADMAVR 289

Query: 366 IAAATAL 372
           I AA  L
Sbjct: 290 IEAARQL 296


>gi|297819888|ref|XP_002877827.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
 gi|297323665|gb|EFH54086.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVP 259
           LTE   G+D + + +   K+  G       +W  +S  +D  I+ A+     ++  F+V 
Sbjct: 174 LTEPDNGSDASGLGTTATKVEGGWKIKGQKRWIGNSTFADLLIIFARNTTTNQINGFIVK 233

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
           +        GL   ++ NKIG R     ++   N F   + D +   G    +D   ++ 
Sbjct: 234 K-----DAPGLKATKIPNKIGLRMVQNGDILLQNVF---VPDEDRLPGVNSFQDTSKVLA 285

Query: 318 LDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++    G+ + + +  H Y + R   G  L    + ++ +  +  ++ A   + +
Sbjct: 286 VSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGW 345

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  +    +A+       + K W    A    +   E +GG+G + +  +A+ +
Sbjct: 346 RLCKLYETGQMTPGQAS-------LGKAWITSKARETASLGRELLGGNGILADFLVAKAF 398


>gi|328542149|ref|YP_004302258.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326411899|gb|ADZ68962.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 387

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 53/239 (22%)

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           Y +SG K W      SD  I+LA+           +G +  FLV   L+D    G+  + 
Sbjct: 147 YVVSGQKVWISRIQHSDLMILLARTTPLAEVKRKSQG-LSVFLVE--LKDAIGKGMEVRP 203

Query: 275 LKNKIGNRSNA----TVELEFSNTFG-------FLLGDLNVSTGPVEDMKILIYLDSAIM 323
           ++N +G+ +N      +E+   N  G       ++L  LN         + LI    A  
Sbjct: 204 IENMVGHETNEVFFDNLEIPAENLIGEEGSGFRYILDGLNAE-------RTLI----AAE 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLAN 378
            +      L +A  YA  R     ++ D+P+     ++  +A   +++ AA  + F    
Sbjct: 253 CIGDGYWFLDKACAYANER-----VVFDRPIGQNQGIQFPLARAYVNVEAANLMRFEACR 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            FD  +    +A  A+++A    +           E ++  GG G+ +E  + R +RE+
Sbjct: 308 RFDAHEECGAQANMAKLLAADASWQAAN-------ECLQVHGGFGFADEYDVERKFRET 359


>gi|326384997|ref|ZP_08206670.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196288|gb|EGD53489.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 395

 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 14/249 (5%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246
           P      A+G  GLTE   G+D   + ++   + DG  + L+G K W  +  ++D  ++ 
Sbjct: 124 PRMAAGDALGCFGLTEPDFGSDPGGMRTRA--VRDGSDWVLNGAKMWITNGSVADVAVVW 181

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   +      G     ++ K+  R++ T EL   +        L  + 
Sbjct: 182 AKTDLEQGARGIRGFVVPTDTPGFSAPEIRAKMSLRASVTSELVLQDVRLPESAMLPKAA 241

Query: 307 GPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    +  L      I+  S+   R  L  A+ YA  R V    L    + +  +AD+AL
Sbjct: 242 GLSGPLSCLNEARFGIIFGSIGAARDCLETAVDYASTRMVFDKPLAAYQLTQAKLADMAL 301

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++     L++RL    D  +    + +  ++         C+ A  V  E    +  +G 
Sbjct: 302 EVGKGHLLAYRLGRLKDAGEVEPAQVSLGKLNN-------CREAIKVARECRTILAANGI 354

Query: 425 IEERSIARH 433
             E  + RH
Sbjct: 355 TLEYPVIRH 363


>gi|302880807|ref|XP_003039334.1| hypothetical protein NECHADRAFT_56371 [Nectria haematococca mpVI
           77-13-4]
 gi|256720161|gb|EEU33621.1| hypothetical protein NECHADRAFT_56371 [Nectria haematococca mpVI
           77-13-4]
          Length = 420

 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 51/285 (17%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ +       G+TE   G D   + S  ++  D  Y LSG K F+S+         AQ
Sbjct: 143 APLIQGKERACFGVTEPNSGLDTLRLQSFARRKGD-YYELSGSKVFIST---------AQ 192

Query: 249 VEGRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV- 304
           V  ++   +    LED     PN    Q L     N   + VE++     G    D N  
Sbjct: 193 VSEKILILVRTTPLEDVRKNEPN----QGLSLFYTNLDRSAVEVKEIQKMGRAAVDTNAL 248

Query: 305 ----STGPVEDM------------------KILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                  P +D+                  +ILI  ++  +  + +R     A +YA  R
Sbjct: 249 FFDGWKVPAKDLVGQEGEGFRMIMHGMNAERILIGAEALGLGYAALR----RACNYANER 304

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            V G  +     ++  +A+  +++ +A  + +  A  +D+     E        A   KY
Sbjct: 305 VVFGRPIGSNQGIQHPLAECWMNLESARLVVYLAARLYDQGYQDGE-------YANTGKY 357

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              + A      A+   GG GY +E  + R+ RES  + I   SG
Sbjct: 358 LAAEAAFKTAERAILTHGGMGYAKEYHVERYLRESMISRIAPVSG 402


>gi|326473737|gb|EGD97746.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 399

 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 25/254 (9%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------- 249
            G+TE   G +   + +   K  D     S H W  S+ ++   I+LA+           
Sbjct: 125 FGVTEPNTGLETLKLRTVAVKDGDSYRLTSEHSWISSAQVAQKMILLARTTPVEEVNKPS 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           EG +  F +     D +  GL  +++K K+G RS    E+ F + +      L  + G  
Sbjct: 185 EG-LSLFFIDF---DRAAPGLDLRKIK-KMGGRSVDANEV-FFDEYRIPADSLIGNEG-- 236

Query: 310 EDMKILIY---LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI+++    +  +++   +    V+L +A  YA+ R V G  +     +   +A   
Sbjct: 237 EGFKIVLHGMNAERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQAIAHPLAAAY 296

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           + + AA   ++     +DE+++ S        +     KY   + A A    A+  +GG 
Sbjct: 297 MSLEAAKLATYHATKLYDESRNDSSITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGM 356

Query: 423 GYIEERSIARHYRE 436
           GY +E  + R+ RE
Sbjct: 357 GYAQEYHVERYLRE 370


>gi|302560060|ref|ZP_07312402.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302477678|gb|EFL40771.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 387

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 54/301 (17%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++SP++   +++A   T    ++W P +     D T           +  G+TE   G++
Sbjct: 87  VVSPAICG-TVIARFGTGEQKREWLPAL----ADGTRT---------MAFGITEPDAGSN 132

Query: 211 IAAITSQGQK-ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVG-----CFLVPRLL 262
              IT+  ++  + G + L+G K F+S    +DA +++ + E  R G      F+VPR  
Sbjct: 133 SHRITTTARRDPASGDWLLTGRKVFVSGVDTADATLVVGRTEDARTGNLKPCLFIVPR-- 190

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPV---EDMKILIYL 318
                +G            R    +EL+ S   F  +L D+ +  G +   ED  +L   
Sbjct: 191 ---DTDGF----------QRRAIDMELQASERQFELVLDDVRLPAGALVGEEDAGLLQLF 237

Query: 319 DS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                     A  ++   R +LA A+ YAR R V    +     +   +A   +++  A 
Sbjct: 238 AGLNPERIMGAAFAIGMGRYALARAVEYARERTVWKVPIGAHQAIAHPLAQAHIELELAR 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  + A+  D         A     A + KY   +     + +A+  +GG+G   E  +
Sbjct: 298 LMMQKAAHLCDAGDDIGAGEA-----ANMAKYAAGEACVKAVDQAVHTLGGNGLTREYGL 352

Query: 431 A 431
           A
Sbjct: 353 A 353


>gi|107022741|ref|YP_621068.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116689690|ref|YP_835313.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892930|gb|ABF76095.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647779|gb|ABK08420.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 388

 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 101/264 (38%), Gaps = 55/264 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
             +TE   G D   +T+Q ++  D  Y LSG K W  ++ +++  +++A+          
Sbjct: 124 FAVTEPDAGLDTTHLTTQARRDGDH-YVLSGRKIWISTAQVANKMLIIARTTPLDQVAKP 182

Query: 250 ------------EGRVGCFLVPRLLEDG-SPNGLCYQRLK----NKIGNRSNATVELEFS 292
                         RV    + ++       N L    L+    + IGN  +        
Sbjct: 183 TDGLSLFYTDLDRSRVEVREIEKMGRKAVDSNMLFIDNLRVSRDDLIGNEGDG------- 235

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
             F +LL  LN         +ILI  ++  +  + +R     A  YA  R V G  +   
Sbjct: 236 --FRYLLHGLNPE-------RILIAAEAIGLGQAALR----RATQYACERVVFGRPIGQN 282

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A   + + AA  +  + A  +D  +S   EA  A+ +     +  C+ A A  
Sbjct: 283 QSIQHPLAQAWMQLEAAWLMVMKAATRYDAGQSCGAEANAAKYLGAEAAFQACQTAIATH 342

Query: 413 AEAMECIGGSGYIEERSIARHYRE 436
                  GG GY +E  + R+ RE
Sbjct: 343 -------GGMGYAKEYHVERYLRE 359


>gi|296167012|ref|ZP_06849425.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897642|gb|EFG77235.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 403

 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 57/303 (18%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK 232
           W P++F    +P   A             +E   G+D+ AI ++ +   +   + L+G K
Sbjct: 110 WLPEMFGTADEPKLGA----------FCSSEPDAGSDVGAIRTRARYDEATNEWVLNGTK 159

Query: 233 -WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  +  +++  I++A V   +G      F+VP         GL   +   K G R++ T
Sbjct: 160 TWATNGGIANVHIVVASVYPELGTRGQATFVVP-----AGVAGLAQGQKFKKHGIRASHT 214

Query: 287 VELEFSNTF---GFLLGD--------LNVSTGPVED----MKILIYLDSAI--MSVSGMR 329
            E+   N       +LG           V +G        MK        +  M+V   R
Sbjct: 215 AEVVLDNVRLPEDHILGGREKFEARIARVKSGASARSQAAMKTFERTRPTVGAMAVGVAR 274

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEA 383
            +   A+ YA +R   G  + +   +   +AD+   I AA  L +R         SFD A
Sbjct: 275 AAYEYALDYACQREQFGRKIGEFQAVAFKLADMKSRIDAARLLVWRAGWMARNNQSFDAA 334

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E + A+++A  T  +       V  EA++ +GG+GY  +  + R +R++   +I 
Sbjct: 335 -----EGSMAKLVASETAVY-------VTDEAIQILGGNGYTRDYPVERMHRDAKIFTIF 382

Query: 444 LGS 446
            G+
Sbjct: 383 EGT 385


>gi|330688310|gb|AEC32929.1| short chain acyl-coenzyme A dehydrogenase [Pachycara
           brachycephalum]
          Length = 100

 Score = 37.4 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA +A  I A   L++  A      +   +EA  A       KY+  ++A    ++ +E 
Sbjct: 2   IAHVATQIEAGRLLTYNAARLKQAGRPFIKEACMA-------KYFTSEVATLTTSKCIEW 54

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G+ ++  I ++YR+    +I  G+ N  +  +   ++K
Sbjct: 55  MGGVGFSKDYPIEKYYRDCKIGTIYEGTTNIQLSTMAKFIDK 96


>gi|308272942|emb|CBX29546.1| Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           [uncultured Desulfobacterium sp.]
          Length = 554

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 21/264 (7%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K S  +   +TE   G+++AA+ ++   + D      Y ++G K F+S+     FI L  
Sbjct: 129 KDSSLVAYAVTEADAGSNLAALKTKADPVIDNGKITGYVINGTKQFISTGGYADFITLLA 188

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
                  F V   +E G+  G    + + K G R++ T  L F + F     L+G +   
Sbjct: 189 NTPEGPAFFV---VEKGT-KGFIQGKGEEKHGIRASNTSPLIFEDVFVPVENLIGGIP-G 243

Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-QPVMKRAIADI 362
            G  +  K+  Y  +  A M++   +  L   I YA++R   G  L + Q    + +   
Sbjct: 244 HGLKQANKVFGYTRVMVAAMALGASQACLNILIPYAKQRIQFGTPLSEKQGYTHKLVVPN 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +   AA A    +    D  +         ++   I K +  + A     +A++ +GG 
Sbjct: 304 VVRTEAAAAYVDEVVVRLDSGEED------LQVEGSIAKLFATESADKAADDAIQGLGGY 357

Query: 423 GYIEERSIARHYRESPANSILLGS 446
           GYI E  + +  R+     I  G+
Sbjct: 358 GYIAEYEVEKIKRDVRITRIYEGT 381


>gi|27382380|ref|NP_773909.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27355551|dbj|BAC52534.1| blr7269 [Bradyrhizobium japonicum USDA 110]
          Length = 382

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 37/268 (13%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVE--- 250
           S+ + L  +E+    D+A + +   K + G + L+G K   L    +D  I+ A +    
Sbjct: 118 SLKLALAHSERAARFDLAKVATAANKTAQG-WRLAGSKIAVLDGHAADEIIVSAHIHDHR 176

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-EFSNTFGFLLGDLNVST 306
              GR+G FLVP      +  GL         G R+   +EL +       LLGD   + 
Sbjct: 177 GPSGRIGLFLVP-----ATAPGLSISDYPRLGGGRA-CNIELPDVHLPEDALLGDGKDAL 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +E             +V  M++ L   + Y + R   G  L    V++  +AD+A+ +
Sbjct: 231 PAIEWAVDRAMAALGAEAVGIMQMLLETTLEYTKIRKQFGRPLSANQVIRHRLADMAMQV 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA--------EAMEC 418
                         DEA+S +  AA      PI +      A A I         ++++ 
Sbjct: 291 --------------DEARSMALRAALKADSTPIERARAASGAKAKIGKCARFVGEQSIQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446
            GG G  EE  +  +++   A   L G 
Sbjct: 337 HGGMGVTEELEVGAYFKRLVAFDTLFGG 364


>gi|296163119|ref|ZP_06845890.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295886621|gb|EFG66468.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 376

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 26/247 (10%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252
           + L   E  G  ++A +T++ Q+  D  + L+G K  +     +  F++ A+  G     
Sbjct: 119 VALAHGEPDGHYELARVTTRAQRSGDA-WRLNGAKAVVQHGEHASLFLVSARTHGDNDEE 177

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
             V  FLVPR        G+  +  +   G R+    EL F N       LLG       
Sbjct: 178 AGVTLFLVPR-----DAAGVSVRGYRKIDGGRA---AELTFDNVALGDDALLGSAGAGFA 229

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           P+E       L S   +V  M V+    + Y R R   G  +     ++  +AD+ L+I 
Sbjct: 230 PLEYAVGCGVLASCSEAVGAMDVAKDHTLEYLRTRKQFGVPIGSFQALQHRMADLMLEIE 289

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A +     A +    +   E A  A       KY   ++   V  E ++  GG G   E
Sbjct: 290 QARSAVINAAAALGAERRLRERAVSA------AKYSIGRIGARVAEECIQLHGGIGMTWE 343

Query: 428 RSIARHY 434
             +A HY
Sbjct: 344 LPLA-HY 349


>gi|183981272|ref|YP_001849563.1| peptide synthetase Nrp (peptide synthase) [Mycobacterium marinum M]
 gi|183174598|gb|ACC39708.1| peptide synthetase Nrp (peptide synthase) [Mycobacterium marinum M]
          Length = 3157

 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 27/172 (15%)

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A +R VS G+LI  PV++R  A IA +I +  AL   +A   D                
Sbjct: 256 FASQREVSTGLLITDPVVQRRTARIAAEIESIEALLGVVATEPD---------------T 300

Query: 398 PITKYWCCKMAPAVIA-----EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           P   +   K+A +  A      AM+ +G  GY+E   +A   R+     I  G   A++ 
Sbjct: 301 PQEIFLTLKVAASEFAYHATDNAMQTLGWRGYVERNRVAALMRDVRFLRIGEGPSEALLT 360

Query: 453 DV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           ++   L  +   +++ + S        SG+     LR+ +     D  +  F
Sbjct: 361 ELGARLAARSDTVYDWMASR------GSGRDAANRLREIVDELAADTSVNNF 406


>gi|260467279|ref|ZP_05813454.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028969|gb|EEW30270.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 382

 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 52/264 (19%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ-------VE 250
            G+TE   GTD  A+ +  +   DG  + + G K W   +  SD  ++LA+       ++
Sbjct: 117 FGVTEPTSGTDTGALKTTAR--LDGYHFVVKGQKIWTSRAEHSDLMLLLARTTPLKDGMK 174

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TFG 296
              G  ++   + +    GL  + ++  +   ++AT E+ F +               F 
Sbjct: 175 KTDGLSVLIVDMREAVGKGLTIRPIRTMM---NHATTEVFFDDLRVPAENLIGEEGKGFR 231

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           ++L  +N         +ILI    A   V   +  + ++  YA+ RHV G  +     ++
Sbjct: 232 YILSGMNAE-------RILI----AAECVGDAKWFIEKSSVYAKERHVFGRAIGQNQGVQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA    ++ AA  +     N ++  K+   EA  A+++A          A A    A 
Sbjct: 281 FPIARAYANMRAAELMVREALNLYEAGKNPGAEANMAKMLA----------ADASNEAAN 330

Query: 417 ECI---GGSGYIEERSIARHYRES 437
            CI   GG G+ EE  + R +RE+
Sbjct: 331 VCIQTHGGFGFAEEYDVERKFRET 354


>gi|145222385|ref|YP_001133063.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315442817|ref|YP_004075696.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145214871|gb|ABP44275.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315261120|gb|ADT97861.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 333

 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L++ + Y + RH  G  +     +K A AD+ + +  +  L   +A++ D      + A 
Sbjct: 213 LSDTVDYVKVRHQFGRPIGSFQAVKHACADMLVAVEVSRQL---VADAVDVLAGGGDAA- 268

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              I A + K + C  A  V  +AM+  GG GY  E  I  + + +  N  L GS
Sbjct: 269 ---IPAAMAKSYVCAAAVEVAGKAMQLHGGIGYTWESGIHTYLKRATLNRSLFGS 320


>gi|218513967|ref|ZP_03510807.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
          Length = 258

 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAPITKYWCC 405
           ++D P + R +  +      + A+S+  A++ D ++   +   +   A ++ PI K +  
Sbjct: 9   IVDHPDVARMLLTMKALTQGSRAISYACAHAIDMSRRAGDSRHWQERAALLTPIAKAFST 68

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                V +  ++  GG G+IEE   AR+ R++    I  G+     +D++ 
Sbjct: 69  DAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVT 119


>gi|91780874|ref|YP_556081.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693534|gb|ABE36731.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 390

 Score = 37.0 bits (84), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 335 AIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A+ YA  R V G   I     ++  +A   +++ AA  L+++ A  FD       EA  A
Sbjct: 266 AVDYANDRKVFGNTPISAYQGLQFPLAQCHVEVQAARLLNYKAATQFDMGLPYGSEANAA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +++A        +        AM+ +GG GY +E  + R +R+
Sbjct: 326 KLLA-------AQAVSRATERAMQTMGGMGYSKEFHVERLWRD 361


>gi|264676357|ref|YP_003276263.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|299533779|ref|ZP_07047150.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|262206869|gb|ACY30967.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|298718195|gb|EFI59181.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 388

 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 49/241 (20%)

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K W      SD  I+LA+           EG +  F+V   L +    G+
Sbjct: 144 KDGRYVINGQKVWISRIQHSDFMILLARTTPLAEVKKKSEG-MSIFMVD--LREAEKKGM 200

Query: 271 CYQRLKNKIGNRSNA----TVELEFSNTFG-------FLLGDLNVSTGPVEDMKILIYLD 319
             + + N + + +N      +E+   N  G       ++L  LN         + LI   
Sbjct: 201 TVRPILNMVNHETNELFFEDLEIPEENLIGEEGKGFKYILDGLNAE-------RTLI--- 250

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   +      L    +Y + R V G  +     ++  IAD  +++ AA  + ++    
Sbjct: 251 -AAECIGDGYWFLDRVTNYVKDRQVFGRPIGQNQGVQFPIADAFIEVEAANLMRWKACEL 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYRE 436
           FD  +S   +A  A+ +A          A A    A  CI   GG G+  E  + R +RE
Sbjct: 310 FDARESMGAQANMAKYLA----------AKASWEAANACIQFHGGFGFACEYDVERKFRE 359

Query: 437 S 437
           +
Sbjct: 360 T 360


>gi|297156612|gb|ADI06324.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 374

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 27/255 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +P  +  W P++             +         L+E + G+D AA+  +    
Sbjct: 94  IVLSGSPEQYARWMPEV-------------RAGRAVAAFALSEPQAGSDAAALGLRADPD 140

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL----K 276
             G + L G K W  ++P +D  ++ A+     G   +   L      GL  +RL     
Sbjct: 141 GAGGWRLEGEKCWISNAPEADFTVVFARTTQGAGSRGITAFLVPADRPGLTGERLDMLSP 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAE 334
           + IG+ +   V +   +  G       V+      M+ L  L  ++   +V   + +L  
Sbjct: 201 HPIGSLAFDGVPVTREDVLGTPDKGFGVA------MRTLNLLRPSVGAFAVGMAQAALDA 254

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA 393
           A+ +A  R   GG L D   +   +A++A    AA  L +  A ++DE A   +  +A A
Sbjct: 255 AVAHAGERTAFGGPLKDLQAVSHQLAEMATRTEAARLLVYAAATAYDEGAPGIARSSAMA 314

Query: 394 RIMAPITKYWCCKMA 408
           +++A  T  +    A
Sbjct: 315 KLLATETAQYVVDAA 329


>gi|120612093|ref|YP_971771.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590557|gb|ABM33997.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 371

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 28/236 (11%)

Query: 143 MAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           M +L  G ++ P   +  ++ M+A      V   W P+I S E         +K    + 
Sbjct: 74  MEELGRGIVLEPLAQTFVASGMLAQCAPEAVQAAWLPRIASGEALVVLAHQERKARYRLD 133

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +   +  G  D A +T     +  G               +DAF++ AQ +GRV  FLV 
Sbjct: 134 VCEAQATGSGDSATVTGTKSLVPAG-------------DQADAFLVPAQHQGRVALFLVE 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R        G+  +    + G+R+    E++F N    L+ +  ++     ++ + I + 
Sbjct: 181 R-----GAQGVATRGYVTQDGSRA---AEVQFDNAPATLVAEDGLAA---LELAVDIGIA 229

Query: 320 SAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +A     G M  ++A  + Y  +R   G  +     ++  +AD+ + +  A ++S+
Sbjct: 230 AACAEAVGVMDQTVALTVDYMNQRKQFGVPIATFQALRHRVADMKMQLELARSMSY 285


>gi|149370542|ref|ZP_01890231.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149356093|gb|EDM44650.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 601

 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 43/274 (15%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFL 257
           LTE   G+D  +  ++     DG  Y +SG K W  ++   D  I+ A++  +  +  F+
Sbjct: 152 LTEPGAGSDANSGKTKAVLSEDGKHYLISGQKMWISNAGFCDVMIVFARIGDDKNITGFI 211

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V    E+ + NG+     ++K+G R+++T ++ F++T    +   N+  G  E  KI + 
Sbjct: 212 V----ENDASNGISMGEEEHKLGIRASSTRQVFFNDT---KVPVDNMLAGRGEGFKIAMN 264

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366
                 +  A   +   R   +EA  YA  R     I    P+     +K  +A++A   
Sbjct: 265 ALNVGRIKLAAACLDSQRRVTSEAAKYANER-----IQFKTPIASFGAIKLKLAEMATSA 319

Query: 367 AAATALSFRLA--------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
               + ++R A              NS  EA+ +  E  YA I   I K    +      
Sbjct: 320 YVGESATYRAAKNIEDRINLRIAAGNSHQEAELKGVE-EYA-IECSILKVAVSEDIQNCA 377

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E ++  GG G+ E+  +   +R++    I  G+
Sbjct: 378 DEGIQIFGGMGFSEDTPMEAAWRDARIARIYEGT 411


>gi|218507995|ref|ZP_03505873.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Brasil 5]
          Length = 168

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +   A  YA+ R   G  + +   +   +AD+A+ I AA  L F  A   
Sbjct: 38  AAQAVGMARAAFEAARDYAKERTAFGKPIFEHQAIAFRLADMAVRIEAARQLVFHAAALR 97

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA+ A++ A        +MA  V ++A++  GG GY+ +  + R YR+    
Sbjct: 98  EAEMPCLSEASMAKLFAS-------EMAERVCSDAIQIHGGYGYMADYPVERIYRDVRIC 150

Query: 441 SILLGSGN 448
            I  G+ +
Sbjct: 151 QIYEGTSD 158


>gi|77458972|ref|YP_348478.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77382975|gb|ABA74488.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 427

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+ Y   R   G  LID  + +  + ++   + AA A++ R   S   A+   +
Sbjct: 293 RAAFEMALQYCHERRQGGHPLIDHQMTRLRLGEMLRRVEAARAVARR---SLSFARLSPQ 349

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              YA   A +T     + A AV+ EA    GG+G   E  I +  R++   S L+  G 
Sbjct: 350 THPYATASAKVT---VTEEAMAVVQEAFRLFGGNGTTREYPIEKLLRDT--QSSLIEDGE 404

Query: 449 AMVLDV-LNLLEK 460
             VL + L LL +
Sbjct: 405 NRVLTMRLGLLAQ 417


>gi|15609637|ref|NP_217016.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis H37Rv]
 gi|15842028|ref|NP_337065.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31793680|ref|NP_856173.1| acyl-CoA dehydrogenase [Mycobacterium bovis AF2122/97]
 gi|121638382|ref|YP_978606.1| putative acyl-CoA dehydrogenase fadE19 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662336|ref|YP_001283859.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium tuberculosis H37Ra]
 gi|148823697|ref|YP_001288451.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis F11]
 gi|167967646|ref|ZP_02549923.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis H37Ra]
 gi|215404437|ref|ZP_03416618.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|215412266|ref|ZP_03421026.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427883|ref|ZP_03425802.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|215431446|ref|ZP_03429365.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|215446750|ref|ZP_03433502.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|218754233|ref|ZP_03533029.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|219558500|ref|ZP_03537576.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|224990876|ref|YP_002645563.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798420|ref|YP_003031421.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 1435]
 gi|254232629|ref|ZP_04925956.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis C]
 gi|254366804|ref|ZP_04982846.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551547|ref|ZP_05141994.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187507|ref|ZP_05764981.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|260201625|ref|ZP_05769116.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|260205815|ref|ZP_05773306.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289444031|ref|ZP_06433775.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|289448145|ref|ZP_06437889.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|289553708|ref|ZP_06442918.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 605]
 gi|289570660|ref|ZP_06450887.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|289575205|ref|ZP_06455432.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289746282|ref|ZP_06505660.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|289751109|ref|ZP_06510487.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|289754609|ref|ZP_06513987.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|289758632|ref|ZP_06518010.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|289762668|ref|ZP_06522046.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|294994392|ref|ZP_06800083.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 210]
 gi|297635108|ref|ZP_06952888.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 4207]
 gi|297732099|ref|ZP_06961217.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN R506]
 gi|298525972|ref|ZP_07013381.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776773|ref|ZP_07415110.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu001]
 gi|306780539|ref|ZP_07418876.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu002]
 gi|306785301|ref|ZP_07423623.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu003]
 gi|306789654|ref|ZP_07427976.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu004]
 gi|306793981|ref|ZP_07432283.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu005]
 gi|306798376|ref|ZP_07436678.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu006]
 gi|306804256|ref|ZP_07440924.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu008]
 gi|306807703|ref|ZP_07444371.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu007]
 gi|306968653|ref|ZP_07481314.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu009]
 gi|306972884|ref|ZP_07485545.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu010]
 gi|307080598|ref|ZP_07489768.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu011]
 gi|307085184|ref|ZP_07494297.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu012]
 gi|313659433|ref|ZP_07816313.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2113933|emb|CAB08918.1| POSSIBLE ACYL-CoA DEHYDROGENASE FADE19 (MMGC) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882306|gb|AAK46879.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619273|emb|CAD97389.1| POSSIBLE ACYL-COA DEHYDROGENASE FADE19 (MMGC) [Mycobacterium bovis
           AF2122/97]
 gi|121494030|emb|CAL72508.1| Possible acyl-CoA dehydrogenase fadE19 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601688|gb|EAY60698.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis C]
 gi|134152314|gb|EBA44359.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506488|gb|ABQ74297.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium tuberculosis H37Ra]
 gi|148722224|gb|ABR06849.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis F11]
 gi|224773989|dbj|BAH26795.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319923|gb|ACT24526.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 1435]
 gi|289416950|gb|EFD14190.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|289421103|gb|EFD18304.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|289438340|gb|EFD20833.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 605]
 gi|289539636|gb|EFD44214.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289544414|gb|EFD48062.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|289686810|gb|EFD54298.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|289691696|gb|EFD59125.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|289695196|gb|EFD62625.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|289710174|gb|EFD74190.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|289714196|gb|EFD78208.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|298495766|gb|EFI31060.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214834|gb|EFO74233.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu001]
 gi|308326605|gb|EFP15456.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu002]
 gi|308330028|gb|EFP18879.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu003]
 gi|308333871|gb|EFP22722.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu004]
 gi|308337671|gb|EFP26522.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu005]
 gi|308341352|gb|EFP30203.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu006]
 gi|308345891|gb|EFP34742.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu007]
 gi|308349144|gb|EFP37995.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu008]
 gi|308353768|gb|EFP42619.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu009]
 gi|308357711|gb|EFP46562.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu010]
 gi|308361652|gb|EFP50503.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu011]
 gi|308365264|gb|EFP54115.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu012]
 gi|323718908|gb|EGB28062.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CDC1551A]
 gi|326904114|gb|EGE51047.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis W-148]
 gi|328458188|gb|AEB03611.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 4207]
          Length = 394

 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD------------AFIML 246
           G GLTE   G+D A  T    ++    + ++G K F+++  +D                 
Sbjct: 130 GFGLTEPGAGSD-AGSTRTTARLEGDEWIINGSKQFITNSGTDITSLVTVTAVTGTTGTA 188

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A  +  +   +VP     G+P G   + + NK+G  ++ T  L F++       LLG   
Sbjct: 189 ADAKKEISTIIVP----SGTP-GFTVEPVYNKVGWNASDTHPLTFADARVPRENLLGARG 243

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +G    + IL    +  A ++    +  + E++ YA +R   G     QP+   A   
Sbjct: 244 --SGYANFLSILDEGRIAIAALATGAAQGCVDESVKYANQRQSFG-----QPI--GAYQA 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           I   IA   A +     ++ +A ++       +  A I K    + A     +A +  GG
Sbjct: 295 IGFKIARMEARAHVARTAYYDAAAKMLAGKPFKKEAAIAKMISSEAAMDNSRDATQIHGG 354

Query: 422 SGYIEERSIARHYRESPANSILLGS 446
            G++ E  +ARHYR+S    I  G+
Sbjct: 355 YGFMNEYPVARHYRDSKVLEIGEGT 379


>gi|14600935|ref|NP_147460.1| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|5104401|dbj|BAA79716.1| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 345

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
           LG+TE  GGTD+ A I ++ +++  G Y L G K+F S+ + +  F++LA
Sbjct: 91  LGITEAGGGTDVRANIATRAEELGGGSYRLEGMKYFTSNALYASHFVVLA 140


>gi|73537439|ref|YP_297806.1| Acyl-CoA dehydrogenase, C-terminal [Ralstonia eutropha JMP134]
 gi|72120776|gb|AAZ62962.1| Acyl-CoA dehydrogenase, C-terminal [Ralstonia eutropha JMP134]
          Length = 381

 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 22/160 (13%)

Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Y LSGHK  ++ +P +  F++ A+  G+      +  F VPR        G+  +     
Sbjct: 148 YVLSGHKSVVAGAPFATHFVVSARTSGKRRDTDGITLFWVPR-----DTPGVTLREYPTI 202

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLA 333
            GNR+   +  +       ++G    +   +E +      D+A++++S      M   LA
Sbjct: 203 DGNRAAEVLFDQARVPASHVIGTEGQALPLIEQLS-----DAALVALSAEANGTMARMLA 257

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           + I YAR+R   G  +    V++  +AD+A+ +  + AL+
Sbjct: 258 DTIDYARQRKQFGVAIGSFQVLQHRMADMAMQLEQSLALT 297


>gi|296534096|ref|ZP_06896603.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296265592|gb|EFH11710.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 388

 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 43/258 (16%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
             +TE   G D   + ++ ++  D  Y + G K W  ++ +++  ++LA+         V
Sbjct: 124 FAVTEPNTGLDTTKLQTRAERRGDH-YVVHGQKVWISTAQVAERVLLLART---TPLEQV 179

Query: 259 PRLLEDGSPNGLCYQRLK------NKIGNRSNATVELEF--------------SNTFGFL 298
            R  E  S       R K       K+G ++  + E+ F                 F ++
Sbjct: 180 TRRTEGLSLFYTALDRTKVRVREIPKMGRKAVDSNEVFFDGLEVPVEDRIGDEGKGFDYI 239

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  LN         +IL+  ++  +      V+L  A  YA+ R V G  +     ++  
Sbjct: 240 LHGLNPE-------RILVAAEAVGLGA----VALRRATEYAKDRRVFGRAIGQNQAIQHP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+  + + AA  +  + A  +D+  S   EA  A+ +A    +  C+        A+  
Sbjct: 289 LAESWMALEAAWLMVMQAAWRYDQGMSCGAEANAAKYLAAEAGFEACQ-------RAVMT 341

Query: 419 IGGSGYIEERSIARHYRE 436
            GG GY  E  + R+ RE
Sbjct: 342 HGGFGYAREYHVERYLRE 359


>gi|222635529|gb|EEE65661.1| hypothetical protein OsJ_21262 [Oryza sativa Japonica Group]
          Length = 243

 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 23/219 (10%)

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           G + L+G K W  +   +D F++LA      ++  F+V      GSP GL   +++NK  
Sbjct: 4   GGWILNGQKRWPANGSFADVFVVLACNTSNNQINGFIV----NGGSP-GLKISKIENKTS 58

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
            R     ++   + F   + D +   G      ++  L  + + V+ + + +A  ++   
Sbjct: 59  LRVVQNCDILLEDVF---VPDDDRLPGANSFQDLVKALSFSCVIVAWISIGIAAGVYDAC 115

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    + +  +  +  +I A   L +RL    D  +  + +A+    
Sbjct: 116 LRYLGERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQAS---- 171

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              + K W  K A   +A   E +GG+G + +  + + +
Sbjct: 172 ---LGKAWITKQARETVALGRELLGGNGIVTDFHVGKAF 207


>gi|312141749|ref|YP_004009085.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311891088|emb|CBH50407.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 656

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 35/264 (13%)

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCF 256
           LTE   G+D A + S      DG  Y L G K W  +  +++  +++A+V   EGR    
Sbjct: 169 LTEPDVGSDPARMASTATPTDDGSAYLLDGVKLWTTNGVVAELLVVMARVPRSEGR---- 224

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG------DLNVSTGPVE 310
                   G P       +   +    +  + +E  N F  L G       LN    P E
Sbjct: 225 -------PGEPGSGHRGGISAFVVEADSPGITVEHRNAFMGLRGIENGVTRLNQVRVPAE 277

Query: 311 DM--------KI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           ++        KI L  L++  +++  M    A+      R   +  +   +PV +     
Sbjct: 278 NLVGREGDGLKIALTTLNAGRLAIPAMCAGAAKWSLKIAREWSAERVQWGRPVGEHGAVA 337

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIG 420
             +   AATA  + L    D A   S+E     RI A + K W  +MA  +  + ++  G
Sbjct: 338 AKISFIAATA--YALEAVLDLAGRMSDEGRNDIRIEAALAKLWSSEMACWIADDLVQIRG 395

Query: 421 GSGYIEERSI-ARHYRESPANSIL 443
           G GY    S+ AR  R  P   +L
Sbjct: 396 GRGYETAASLAARGERAVPVEQLL 419


>gi|311104894|ref|YP_003977747.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759583|gb|ADP15032.1| acyl-CoA dehydrogenase, N-terminal domain protein 4 [Achromobacter
           xylosoxidans A8]
          Length = 384

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 45/316 (14%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++S S  +AS+++   +P + + + P++ S E   +               L+E   G+D
Sbjct: 87  IVSTSNLAASVLSDGGSPYLKEKYLPRVLSGEAIAS-------------FALSEPNIGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGR--VGCFLVPRLLED 264
            A + ++  + + G + ++G K ++S      +   F+   +  G   V C L  R +  
Sbjct: 134 AANVETRAVETATG-WRVNGRKLYISLGTVCELGVVFVQTQRQSGERGVSCLLFERAMPG 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
            S + +      +K+G  S    EL F +       L+G         +      YL+  
Sbjct: 193 FSSSPI------HKMGMLSCPLGELLFEDVEIPAANLIGTEGKGFALAKK-----YLNIG 241

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRL 376
              V+   + +AEA + A  ++    +   +P+     ++  IAD+   +  +  L +R 
Sbjct: 242 RCVVAFSALGIAEAAYEAAVKYAGDRVQFGRPIGGFQLVQHMIADMMTLVETSRLLCWRA 301

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A++ D        AA ++++  + K         V   +M+  GG+GY     + RHYR+
Sbjct: 302 ADALDR------NAADSQMLCSMAKRHATDAVLRVAELSMQVHGGAGYTTLFPVERHYRD 355

Query: 437 SPANSILLGSGNAMVL 452
           +   SI  G+     L
Sbjct: 356 ARHLSIAEGTNQIQAL 371


>gi|15231059|ref|NP_190752.1| ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase
           [Arabidopsis thaliana]
 gi|62286630|sp|Q96329|ACOX4_ARATH RecName: Full=Acyl-coenzyme A oxidase 4, peroxisomal; Short=AOX 4;
           AltName: Full=G6p; AltName: Full=Short-chain acyl-CoA
           oxidase; Short=AtCX4; Short=AtG6; Short=SAOX
 gi|114794822|pdb|2IX5|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794823|pdb|2IX5|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794824|pdb|2IX5|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794825|pdb|2IX5|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|1657621|gb|AAB18129.1| G6p [Arabidopsis thaliana]
 gi|3068711|gb|AAC14411.1| putative acyl-coA dehydrogenase [Arabidopsis thaliana]
 gi|5478795|dbj|BAA82478.1| Short-chain acyl CoA oxidase [Arabidopsis thaliana]
 gi|20453143|gb|AAM19813.1| At3g51840/AtG6 [Arabidopsis thaliana]
 gi|21593380|gb|AAM65329.1| acyl-coA dehydrogenase [Arabidopsis thaliana]
 gi|21928035|gb|AAM78046.1| At3g51840/AtG6 [Arabidopsis thaliana]
 gi|332645330|gb|AEE78851.1| acyl-coenzyme A oxidase 4 [Arabidopsis thaliana]
          Length = 436

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVP 259
           LTE   G+D + + +   K+  G       +W  +S  +D  I+ A+     ++  F+V 
Sbjct: 174 LTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVK 233

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
           +        GL   ++ NKIG R     ++   N F   + D +   G    +D   ++ 
Sbjct: 234 K-----DAPGLKATKIPNKIGLRMVQNGDILLQNVF---VPDEDRLPGVNSFQDTSKVLA 285

Query: 318 LDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++    G+ + + +  H Y + R   G  L    + ++ +  +  ++ A   + +
Sbjct: 286 VSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGW 345

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  +    +A+       + K W    A    +   E +GG+G + +  +A+ +
Sbjct: 346 RLCKLYETGQMTPGQAS-------LGKAWISSKARETASLGRELLGGNGILADFLVAKAF 398


>gi|328951098|ref|YP_004368433.1| Glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451422|gb|AEB12323.1| Glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 386

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257
            GLTE  GG+D  A      +     Y LSG K W  +  ++D  I+ A+  EG V  F+
Sbjct: 129 FGLTEPDGGSDPDANMKTRARRDGDHYVLSGTKMWITNGNIADIAIIWAKDEEGVVRGFI 188

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           VP         G     +K+K+  R++ T EL
Sbjct: 189 VPT-----DAPGFTANEVKHKMSLRASVTSEL 215


>gi|296208288|ref|XP_002751026.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 1 [Callithrix jacchus]
          Length = 421

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256
           +TE   G+D+AAI ++ +K  D  Y ++G K W  +   ++ + +LA+     +      
Sbjct: 160 VTEPGAGSDVAAIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPQAPANKA 218

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311
               ++E  +P G+   R +  +G R         S+T G +  D+     NV  G    
Sbjct: 219 FTGFIVEADTP-GVQIGRKELNMGQRC--------SDTRGIVFEDVKVPKENVLIGEGAG 269

Query: 312 MKILI-YLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            KI +   D         +V   + +L EA  YA  R   G +L +   +   +A++ + 
Sbjct: 270 FKIAMGAFDRTRPAVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQAVSFILAEMVMK 329

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A     R A   D  +  +         A I K +   +A  +  +A++  GG+G+ 
Sbjct: 330 VELARMSYQRAAWEVDSGRRNT-------YYACIAKAFEGDIANQLARDAVQIFGGNGFN 382

Query: 426 EERSIARHYRESPANSILLGS 446
            E  +    R++    I  G+
Sbjct: 383 TEYPVENIMRDAKIYQIYEGT 403


>gi|288924510|ref|ZP_06418468.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288344143|gb|EFC78714.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 257

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 27/256 (10%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRVGC 255
           E+  G+D A++ ++ +   D  + L+G K W  ++  S  + ++A  +         +  
Sbjct: 1   EREAGSDTASMRTRARLDGDH-WVLNGTKTWITNAGESTWYTVMAVTDPDAAKPADGISA 59

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+V          G      + K+G + + T E+ F N    +  D  +          L
Sbjct: 60  FVV-----RADDPGFEVGSKERKLGIKGSPTREIHFVNCT--IPADRIIGEPGTGLRTAL 112

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD    ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ I AA 
Sbjct: 113 RTLDHTRPTIGAQAVGIAQGALDAAIGYVKERRQFGRPIADNQGVQFMLADMAMKIEAAR 172

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            + +  A     A++   E     I A   K +   +A  V  +A++  GG+GY  +  +
Sbjct: 173 HMVYVAA-----ARAERGEPNLGFITAA-AKCFASDVAMEVTTDAVQLFGGAGYTRDFPV 226

Query: 431 ARHYRESPANSILLGS 446
            R  R++    I  G+
Sbjct: 227 ERMMRDAKITQIYEGT 242


>gi|115467966|ref|NP_001057582.1| Os06g0347100 [Oryza sativa Japonica Group]
 gi|113595622|dbj|BAF19496.1| Os06g0347100 [Oryza sativa Japonica Group]
          Length = 242

 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 23/219 (10%)

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           G + L+G K W  +   +D F++LA      ++  F+V      GSP GL   +++NK  
Sbjct: 3   GGWILNGQKRWPANGSFADVFVVLACNTSNNQINGFIV----NGGSP-GLKISKIENKTS 57

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
            R     ++   + F   + D +   G      ++  L  + + V+ + + +A  ++   
Sbjct: 58  LRVVQNCDILLEDVF---VPDDDRLPGANSFQDLVKALSFSCVIVAWISIGIAAGVYDAC 114

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    + +  +  +  +I A   L +RL    D  +  + +A+    
Sbjct: 115 LRYLGERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQAS---- 170

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              + K W  K A   +A   E +GG+G + +  + + +
Sbjct: 171 ---LGKAWITKQARETVALGRELLGGNGIVTDFHVGKAF 206


>gi|325518764|gb|EGC98364.1| cyclohexanecarboxyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 383

 Score = 37.0 bits (84), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 26/261 (9%)

Query: 177 KIFSREYDPTNKAP----MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +I S+   P    P    + +    + + LTE RGG+D A++  + +++ D  Y L+G K
Sbjct: 95  QILSQHARPEIAGPWLERLVQGDALLAIALTEPRGGSDAASLRLRMERVGDE-YVLNGEK 153

Query: 233 WFLS----SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             +S    +  +  F     +E  +G   V  +L      G+   R     G R+     
Sbjct: 154 TSISAADQADAAVVFARTGTIE--MGARGVSAMLVPMDLPGITRNRFDCH-GQRAIGRGS 210

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRH 343
           + F N       LLGD     G V+ M+   +  + I    ++   VSL E   Y  +R 
Sbjct: 211 IFFDNVRVPADHLLGD--EGKGFVQVMQGFDFSRALIGLQVLAVATVSLEETWEYVAQRE 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L     +   +A+    +AAA  L  +     D     + EAA       + K+W
Sbjct: 269 AFGKPLSAFQGVSHPLAEYETQVAAARLLCLQTLWLKDRNLPHTAEAA-------MCKWW 321

Query: 404 CCKMAPAVIAEAMECIGGSGY 424
             K+A  VI + +   G  GY
Sbjct: 322 GPKLAYDVIHQCLLSFGHGGY 342


>gi|326480348|gb|EGE04358.1| acyl-CoA dehydrogenase family member 9 [Trichophyton equinum CBS
           127.97]
          Length = 432

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 28/239 (11%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D++ I +  +K+    Y ++G K ++++ +   +   A   G  G   + 
Sbjct: 155 LRVTEPDAGSDVSGIKTVAKKVGSH-YIVNGAKKWITNGIWADYCTAAVRTGGPGHGGIS 213

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305
            L+   +  G+  +R+ N  G  ++ +  LEF +               F +++ + N  
Sbjct: 214 FLIIPLATEGVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGRENEGFKYIMSNFNPE 272

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                     + L SA + +S  RV + +A  Y+  R   G  L+   V++  I+ +   
Sbjct: 273 R---------LSLASACIRLS--RVCVEDAFRYSTVRETFGKPLLANQVIRTKISKMGQL 321

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           I    A   +LA +   ++    +     + A + K    +    V  EA + +GG+GY
Sbjct: 322 IEPCQAFMDQLAYTIKTSEQAGRKVDIGGMTA-LLKVMSTRCLEKVCREAQQIMGGAGY 379


>gi|114794826|pdb|2IX6|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794827|pdb|2IX6|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794828|pdb|2IX6|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794829|pdb|2IX6|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794830|pdb|2IX6|E Chain E, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794831|pdb|2IX6|F Chain F, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
          Length = 449

 Score = 37.0 bits (84), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 22/240 (9%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVP 259
           LTE   G+D + + +   K+  G       +W  +S  +D  I+ A+     ++  F+V 
Sbjct: 174 LTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVK 233

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIY 317
           +        GL   ++ NKIG R     ++   N F   + D +   G    +D   ++ 
Sbjct: 234 K-----DAPGLKATKIPNKIGLRMVQNGDILLQNVF---VPDEDRLPGVNSFQDTSKVLA 285

Query: 318 LDSAIMSVS--GMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   +++    G+ + + +  H Y + R   G  L    + ++ +  +  ++ A   + +
Sbjct: 286 VSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGW 345

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL   ++  +    +A+       + K W    A    +   E +GG+G + +  +A+ +
Sbjct: 346 RLCKLYETGQMTPGQAS-------LGKAWISSKARETASLGRELLGGNGILADFLVAKAF 398


>gi|332531428|ref|ZP_08407332.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332039097|gb|EGI75519.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 371

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 24/201 (11%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +DAF++ AQV+G++  FLV R     + NG+  Q      G+R+    E+ F +    LL
Sbjct: 161 ADAFLVPAQVQGKIALFLVER-----NANGVTAQGYGTVDGSRA---AEVSFKSAPAQLL 212

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                +T  +  +   + +  A +   +V  M  +LA  + Y   R   G  L     ++
Sbjct: 213 -----TTEGLNALAHAVDIGLAALCAEAVGVMDQTLAATVDYMNTRKQFGVTLATFQALR 267

Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             +AD+ + +  A ++S+  +   +  A  R    A A++    +  +  +       +A
Sbjct: 268 HRVADMKMQLELARSMSYYASLKLNAPADERRRAMARAKVQLGQSMRFIGQ-------QA 320

Query: 416 MECIGGSGYIEERSIARHYRE 436
           ++  GG G  EE  ++ ++++
Sbjct: 321 VQLHGGIGVTEEFIVSHYFKK 341


>gi|184199718|ref|YP_001853925.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183579948|dbj|BAG28419.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 400

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 50/249 (20%), Positives = 100/249 (40%), Gaps = 19/249 (7%)

Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           P      AIG  GLTE   G+D +++ +  +K  +        +W   + ++   ++ AQ
Sbjct: 134 PRMAAGEAIGCFGLTEPTAGSDPSSMKTFARKDGEDWVINGAKRWIGLASVAKVAVIWAQ 193

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305
            +  +  F+VP         G     +  K+  R++   ++E ++       +L +    
Sbjct: 194 TDDGIRGFVVPT-----DTPGFKATPITAKLSMRASIQCDIELTDVRLPASAMLPEAKGL 248

Query: 306 TGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
            GP   +    Y    I    G  R S   A+ Y++ R      L    + ++ + ++AL
Sbjct: 249 RGPFSCLNEARY--GIIWGAMGAARDSFEAALAYSQERMQFDRPLSGYQMTQQKLVNMAL 306

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I     L+ +L    D  K ++ + +  ++         C+ A  +  EA   +GG+G 
Sbjct: 307 EIDKGFLLALQLGRLKDAGKLQNHQISVGKLNN-------CREAIKIAREARTILGGNGV 359

Query: 425 IEERSIARH 433
             + S  RH
Sbjct: 360 TLDYSPLRH 368


>gi|238796376|ref|ZP_04639885.1| hypothetical protein ymoll0001_22040 [Yersinia mollaretii ATCC
           43969]
 gi|238719821|gb|EEQ11628.1| hypothetical protein ymoll0001_22040 [Yersinia mollaretii ATCC
           43969]
          Length = 285

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 28/168 (16%)

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+SA  +V   +  LA+A H A RR         + + K  I+   LDIA  TA S + A
Sbjct: 84  LESAQAAVIRAQAELAKANHEAERR---------RNLPKNIISGEDLDIANLTADSMKAA 134

Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKY----------WCCKMAPAVIAEAMECIGGSG 423
             +  A +  E+A +     RI AP   Y          +     P V     +     G
Sbjct: 135 --YQGALANLEQAKWNLSKTRIYAPTNGYITNLQTRVGNYATTGTPLVALIDTDSFYVMG 192

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
           Y EE  + RH RE  A  I+L +GN  +  V+  +  G  +++Q   T
Sbjct: 193 YFEETKL-RHIREGNAAKIVLYNGNIPLRGVVESI--GRAIYDQSVDT 237


>gi|172060637|ref|YP_001808289.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171993154|gb|ACB64073.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 388

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 55/264 (20%)

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------- 249
             +TE   G D   +++Q ++  D  Y LSG K W  ++ +++  +++A+          
Sbjct: 124 FAVTEPDAGLDTTHLSTQARRDGDH-YVLSGRKIWISTAQVANKMLIIARTTPLDAVAKP 182

Query: 250 -EG-----------RVGCFLVPRLLEDG-SPNGLCYQRLK----NKIGNRSNATVELEFS 292
            EG           RV    + ++       N L    L+    + IGN  +        
Sbjct: 183 TEGLSLFYTDLDRSRVEVRAIEKMGRKAVDSNMLFIDNLRVPRDDLIGNEGDG------- 235

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
             F +LL  LN         +ILI  ++  +  + +R     A  YA  R V G  +   
Sbjct: 236 --FRYLLHGLNPE-------RILIAAEAIGLGQAALR----RATQYACERVVFGRPIGQN 282

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A   + + AA  +  + A  +D  +S   EA  A+ +     +  C+ A A  
Sbjct: 283 QSIQHPLAQAWMQLEAAWLMVMKAATRYDAGQSCGAEANAAKYLGAEAAFQACQTAIATH 342

Query: 413 AEAMECIGGSGYIEERSIARHYRE 436
                  GG GY +E  + R+ RE
Sbjct: 343 -------GGMGYAKEYHVERYLRE 359


>gi|302858127|ref|XP_002960023.1| hypothetical protein VOLCADRAFT_101534 [Volvox carteri f.
           nagariensis]
 gi|300253532|gb|EFJ38912.1| hypothetical protein VOLCADRAFT_101534 [Volvox carteri f.
           nagariensis]
          Length = 251

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YA+ R   G  +     ++  IA   + + A TA   RLA  + +A SR       +
Sbjct: 27  SVKYAKERSAFGQNIGKYQAIQFKIAR--MQVRAHTA---RLA--YYDAASRMLAGKPFK 79

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K    + A     +A +  GG G+I E ++ARHYR+S    + +G G   V  +
Sbjct: 80  TEAAIAKMVAGEAAMDNARDATQVFGGYGFINEFTVARHYRDSKI--LEIGEGTTEVQLM 137

Query: 455 LNLLEKGTNLFEQL 468
           L   E GT   E +
Sbjct: 138 LIARELGTTDLETV 151


>gi|17231550|ref|NP_488098.1| hypothetical protein alr4058 [Nostoc sp. PCC 7120]
 gi|17133193|dbj|BAB75757.1| alr4058 [Nostoc sp. PCC 7120]
          Length = 602

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 22/248 (8%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
           M+  + A+ L  +EK  G+D+ A   +  K   G Y L+G KW ++ + +S    +LA+ 
Sbjct: 116 MKDANGAMCLAYSEKAHGSDLLASDVRATKAPGG-YILNGEKWPINRATISGVTFVLAKT 174

Query: 250 EGRVGC-FLVPRLLEDGSPNGLCYQRLKNKI--GNRSNATVELEFSNTF-------GFLL 299
           +   G   L   ++E    +   Y  L      G R +    ++F N F       G   
Sbjct: 175 DEEGGARSLSLFMIEKSKIDPANYSHLPKIFTHGVRGSDMSGIKFENCFIPESMRLGAEG 234

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             L ++    +  + L     A  S      +L   + +A  R + G  + D P  KR +
Sbjct: 235 AGLELALKGFQITRAL----CAAFSQGAADTALRTTLKFALGRQLYGKTVYDMPQPKRTL 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D  LDI      +  +   F+    +        + + + KY+       V+      +
Sbjct: 291 TDAFLDILICDCATIGVTRGFNTMPEQ------ISVWSAVVKYFVTTNLETVVQNVSVVL 344

Query: 420 GGSGYIEE 427
           G   Y+ E
Sbjct: 345 GSRFYMRE 352


Searching..................................................done


Results from round 2




>gi|254780299|ref|YP_003064712.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039976|gb|ACT56772.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 562

 Score =  743 bits (1918), Expect = 0.0,   Method: Composition-based stats.
 Identities = 562/562 (100%), Positives = 562/562 (100%)

Query: 1   MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60
           MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL
Sbjct: 1   MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW
Sbjct: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS
Sbjct: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
           REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS
Sbjct: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG
Sbjct: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA
Sbjct: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG
Sbjct: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG
Sbjct: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS
Sbjct: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540

Query: 541 THCMLHGRFNAAHIIDSLYLDC 562
           THCMLHGRFNAAHIIDSLYLDC
Sbjct: 541 THCMLHGRFNAAHIIDSLYLDC 562


>gi|315122276|ref|YP_004062765.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495678|gb|ADR52277.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 551

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 445/550 (80%), Positives = 494/550 (89%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ HQ  DSL  LNQP LFIGMNAY SDS +V L ANFP  + KELELLGEYV S +AQ
Sbjct: 1   MNQTHQQLDSLSELNQPSLFIGMNAYKSDSFVVDLTANFPRSIRKELELLGEYVFSYSAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN+N PQLHAYG GGER D++EFHPAWHALLRRS+ DGLHC++W+R++EP VRKQ
Sbjct: 61  ELARMANHNIPQLHAYGAGGERCDRIEFHPAWHALLRRSMKDGLHCAVWNRNYEPEVRKQ 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HKIRAARLYLMAQLEAGHL S S+TSASMVALMTTPRVHKDWA KI S+EYDPT+KAPM
Sbjct: 121 IHKIRAARLYLMAQLEAGHLTSLSMTSASMVALMTTPRVHKDWAYKILSQEYDPTSKAPM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKTSV IGLGLTEK+GGTDI AITS GQKISDGIYCLSGHKWFLS+PMSDAFIMLA+VEG
Sbjct: 181 QKTSVTIGLGLTEKQGGTDIGAITSLGQKISDGIYCLSGHKWFLSAPMSDAFIMLARVEG 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            VGCFLVPRLLEDGS NGLCYQRLKNKIGNRSNATVE+EFSN FGFLLGDLN  T PVED
Sbjct: 241 IVGCFLVPRLLEDGSSNGLCYQRLKNKIGNRSNATVEVEFSNAFGFLLGDLNAGTSPVED 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           MKIL+YLD AI+S SGMR SLAEAIHYARRR+VSG ILIDQ +M R IAD+ALD+AAATA
Sbjct: 301 MKILMYLDCAIISTSGMRASLAEAIHYARRRYVSGNILIDQSIMNRVIADVALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLAN+FDEAK RSE+AAYAR+MAP+TKYWCCK+APAVIAEAMECIGGSGY+EERSIA
Sbjct: 361 LSFRLANAFDEAKLRSEDAAYARVMAPVTKYWCCKIAPAVIAEAMECIGGSGYVEERSIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRESPANSILLGSGNAMVLD+LNLLEKG+NLFEQ+FS LE+DLGSSGKKVI +L+DS+
Sbjct: 421 RHYRESPANSILLGSGNAMVLDLLNLLEKGSNLFEQVFSNLEKDLGSSGKKVIDLLQDSV 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLCKED+GLAR L E++A+A+SAAAL R G ++IADVFLE+RF  N HST+ +LH R N+
Sbjct: 481 SLCKEDRGLARLLIERMAIAASAAALCREGADNIADVFLESRFFGNGHSTYGLLHSRVNS 540

Query: 552 AHIIDSLYLD 561
            HIIDSLYLD
Sbjct: 541 THIIDSLYLD 550


>gi|222085618|ref|YP_002544148.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221723066|gb|ACM26222.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 552

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 325/548 (59%), Positives = 409/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q  +  D+   LNQP L+ G+NAY SD L+V L +N P    ++LE +G YV S  AQ
Sbjct: 1   MTQSTRNDDTFAELNQPSLWSGINAYRSDPLIVDLTSNLPRSTREDLEQMGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH SIWD   +P  + Q
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSAGLHSSIWDAQADPDAKGQ 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RAAR YL AQLE GHL   ++TSAS+ A+M +P V KDWAPK+ SR+YD +NK  M
Sbjct: 121 SHKVRAARFYLTAQLECGHLCPLTMTSASVAAMMASPAVQKDWAPKVLSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  +   K+SDGIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRTTADKVSDGIYRLSGHKWFMSAPMSDAFIMLAQTKD 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDGGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASAGIMRASLAEAVHHTRGRSVFGKTLVQQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+FRLA SFD+A S SE+AAYAR+M P+ KYWCCK+APA+I EAMECIGGSGYIEER IA
Sbjct: 361 LAFRLAESFDKASSSSEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGSGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR ++
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGRDLFETVFAGLARDLGPAGKKTIDVLRAAM 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLIEQMALAAGAAELYRLGAGKIADAFIETRLAGGWRSTYGMLDARFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|15888635|ref|NP_354316.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15156363|gb|AAK87101.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 550

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 309/548 (56%), Positives = 397/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M Q  +  ++L  LNQP L+ G+NAY SD L+V L +     +  E + LG YV S  AQ
Sbjct: 1   MTQNSRTEETLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEYDQLGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQLH +GP GER D+VEFHPAWHAL+RRS+  GLH S+W+ S  P  R  
Sbjct: 61  ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENS--PDTRGS 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK RA + YL +QLEAGHL   ++TSAS+ A+MT+PRV K+W PKI SR+YD   K  +
Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSPRVQKEWMPKILSRKYDSAQKPAL 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKT+V +G+G+TEK+GGTD+ A  +  +++ +GIY LSGHKWFLS+PMSD F+MLAQ+  
Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRTTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLGD       + D
Sbjct: 239 GMGCFLVPRYLEDGSKNGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGDPGSGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+AR R V G +L+ QP+M R +AD+ALD+AAATA
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHFARGRSVFGKMLVSQPIMTRVLADMALDVAAATA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A++   EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA
Sbjct: 359 LSFRLATAFDAARNNPAEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK   +LR +I
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +L + D+G AR L E+ ALA++AA L R G   IAD FLE R       T+ ML  RF+ 
Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538

Query: 552 AHIIDSLY 559
            +IID LY
Sbjct: 539 NYIIDLLY 546


>gi|150396160|ref|YP_001326627.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027675|gb|ABR59792.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 550

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 309/548 (56%), Positives = 406/548 (74%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKSLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWEN--LPDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+ ++P V K+WAPKI SR+YD TN+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITSSPAVQKEWAPKILSRKYDSTNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLSRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|325292671|ref|YP_004278535.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325060524|gb|ADY64215.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 550

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 307/548 (56%), Positives = 399/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M  +++  +SL  LNQP L+ G+NAY SD L+V L +     +  E + LG YV S  AQ
Sbjct: 1   MTGMNRTEESLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEFDQLGRYVTSHEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQLH +GP GER D+VEFHPAWHAL+RRS+  GLH S+W+ + E   R  
Sbjct: 61  ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENAAE--TRGN 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK RA + YL +QLEAGHL   ++TSAS+ A+MT+ RV K+W PKI SR+YD + K  +
Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSSRVQKEWVPKILSRKYDSSQKPAL 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QKT+V +G+G+TEK+GGTD+ A  S  +++ +GIY LSGHKWFLS+PMSD F+MLAQ+  
Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRSTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLG+       + D
Sbjct: 239 GMGCFLVPRYLEDGSANGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGEPGSGVRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+AR R V G  L+ QP+M R +AD+ALD+AAATA
Sbjct: 299 MVTLTRLDCALASSGMMRASLAEAVHFARGRSVFGKTLVSQPIMTRVLADMALDVAAATA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD A++ + EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA
Sbjct: 359 LSFRLASAFDAARNNASEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK   +LR +I
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +L + D+G AR L E+ ALA++AA L R G   IAD FLE R       T+ ML  RF+ 
Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538

Query: 552 AHIIDSLY 559
            +IID LY
Sbjct: 539 NYIIDLLY 546


>gi|15965058|ref|NP_385411.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021]
 gi|307301130|ref|ZP_07580899.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15074237|emb|CAC45884.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306904085|gb|EFN34671.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 550

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 308/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWEN--LPDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD +N+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|218509657|ref|ZP_03507535.1| acyl-CoA dehydrogenase protein [Rhizobium etli Brasil 5]
          Length = 552

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 322/548 (58%), Positives = 411/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|307317863|ref|ZP_07597301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306896625|gb|EFN27373.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 550

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 307/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NA+ SD L+V + ++ P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWEN--LPDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK+RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD +N+  M
Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N++  GSGN M LDVL +L +   LFEQLF+T+ +DLG +G+K I +LR ++
Sbjct: 419 RHYREAPVNAVWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      ST+ ML  RF++
Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|241204127|ref|YP_002975223.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858017|gb|ACS55684.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 552

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 320/548 (58%), Positives = 413/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  EMARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL +QLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|190891326|ref|YP_001977868.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190696605|gb|ACE90690.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 552

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 322/548 (58%), Positives = 411/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  V ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGVREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN  TPQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFTDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGRMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|327190278|gb|EGE57378.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 552

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 321/548 (58%), Positives = 410/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|116251506|ref|YP_767344.1| acyl CoA-like DNA repair protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115256154|emb|CAK07235.1| putative acyl CoA-like DNA repair protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 552

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 320/548 (58%), Positives = 412/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  EMARMANQGAPQLRTHGPRGERLDIVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL +QLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|209548903|ref|YP_002280820.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534659|gb|ACI54594.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 552

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 321/548 (58%), Positives = 412/548 (75%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  + L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + +
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDE 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AHK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +NK  M
Sbjct: 121 AHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|86357277|ref|YP_469169.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86281379|gb|ABC90442.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 552

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 319/548 (58%), Positives = 410/548 (74%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   ++  D L  LNQP L+ G+NAY SD L+V L A  P  + ++LE +G YV S  AQ
Sbjct: 1   MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENIGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   +  
Sbjct: 61  ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADIEAKDA 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            HK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  M
Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + 
Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG  +     + D
Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA
Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA++FD+A+  +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA
Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I
Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +LC++D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A
Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540

Query: 552 AHIIDSLY 559
           ++I+D LY
Sbjct: 541 SYIVDLLY 548


>gi|222148314|ref|YP_002549271.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221735302|gb|ACM36265.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 547

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 303/545 (55%), Positives = 396/545 (72%), Gaps = 2/545 (0%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           + +  D L  LNQP  + G+NA+ +D L+V +       +  E + LG YV S  AQELA
Sbjct: 1   MSRTEDKLLELNQPRPWSGVNAFRTDPLVVDITNGLSRNLRDEYDTLGRYVTSHEAQELA 60

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           RMAN+N P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S+W+   +   R Q HK
Sbjct: 61  RMANHNPPELRTHGPRGERLDVVEFHPAWHALMRRSMATGLHSSVWENLAD--ARGQDHK 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RA R YL AQLE GHL   ++TSAS+ ALM +PRV K+WAPKI SR+YD +N+  MQK+
Sbjct: 119 ARAVRFYLTAQLECGHLCPLTMTSASVAALMGSPRVQKEWAPKILSRKYDSSNRPAMQKS 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           ++ IG+G+TEK+GGTD+ A  S   ++ +GIY LSGHKWF+S+PMSD F+MLAQ+   VG
Sbjct: 179 AITIGMGMTEKQGGTDVRANISTATRVGEGIYRLSGHKWFMSAPMSDGFVMLAQMPEGVG 238

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPRLLEDGS NGL +QRLK+KIGNRSNA+ E+EF++ FGFLLG+       + +M  
Sbjct: 239 CFLVPRLLEDGSANGLQFQRLKDKIGNRSNASSEVEFTDAFGFLLGEQGGGIRTILEMVT 298

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  LD A+ S   MR S+AEA+H+ R R V G  L+DQP+M R +AD+ALD+AAATALSF
Sbjct: 299 LTRLDCALASAGIMRASMAEAVHHVRGRSVFGKKLVDQPIMTRVLADMALDVAAATALSF 358

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA +FD A+    +AAYAR+M P+ KYW CKMAP +I EAMECIGGSGY+EER+IARHY
Sbjct: 359 RLAEAFDRARDNPADAAYARVMTPVVKYWVCKMAPPLIYEAMECIGGSGYVEERAIARHY 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE+P N+I  GSGN M LDVL +L +G +LFE +F+ LE+DLG SG+K + +LR +++LC
Sbjct: 419 REAPVNAIWEGSGNVMALDVLRVLARGKDLFEMVFAELERDLGPSGRKTVEVLRAAMALC 478

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           + D+G AR L E++ALA++AA LYR G   IAD FLE R      +T+ +L  RF++ ++
Sbjct: 479 ERDEGAARLLVEQMALAAAAAELYRMGAGKIADAFLETRLTGGWRNTYGVLDARFDSRYL 538

Query: 555 IDSLY 559
           ID LY
Sbjct: 539 IDLLY 543


>gi|260459182|ref|ZP_05807437.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034736|gb|EEW35992.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 542

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 268/539 (49%), Positives = 377/539 (69%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP   G NA+  D LL+ L   F   V K+L+ LG +VL+  AQELAR+AN  
Sbjct: 2   TDDVTNQPPPLAGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQELARLANVE 61

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L  +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+  H++RAAR 
Sbjct: 62  TPKLRTHDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR--HQVRAARF 119

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL A+LE GHL   ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P+ KT + +G+
Sbjct: 120 YLTAELETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPVDKTGLTLGM 179

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ    + CFLVPR
Sbjct: 180 GMTEKQGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPR 239

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + DM  L  LD 
Sbjct: 240 VLGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDC 299

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATALSFRLA SF
Sbjct: 300 AVASSAIMRAGLAEAVHHARHRQVFGSPLIEQPLMQRVLADMALDVAAATALSFRLARSF 359

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DEA S   EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +AR+YRE+P N
Sbjct: 360 DEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVN 419

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDVL +L +   LFE++ + +++DLG+ G+  I +L+ ++ +   D+G 
Sbjct: 420 AIWEGSGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGS 479

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++AL+++AA L R G   IAD F+E R      +T+ ML  R +A  IID+LY
Sbjct: 480 ARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMLDARHDARMIIDTLY 538


>gi|13470871|ref|NP_102440.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14021614|dbj|BAB48226.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 548

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 268/542 (49%), Positives = 379/542 (69%), Gaps = 2/542 (0%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
            S +    NQPP   G NA+  D LL+ L   F   V K+L+ LG +VL+  AQELAR+A
Sbjct: 5   QSVTDDVTNQPPPLTGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQELARLA 64

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N  TP+L  +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+  H++RA
Sbjct: 65  NVETPKLRTHDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR--HQVRA 122

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           AR YL A+LE GHL   ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P++KT + 
Sbjct: 123 ARFYLTAELETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPVEKTGLT 182

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+G+TEK+GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ    + CFL
Sbjct: 183 LGMGMTEKQGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFL 242

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DGS NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + DM  L  
Sbjct: 243 VPRVLGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMIGEPGAGVKTIMDMVTLTR 302

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATALSFRLA
Sbjct: 303 LDCAVASSAIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATALSFRLA 362

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            SFDEA S   EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +AR+YRE+
Sbjct: 363 RSFDEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREA 422

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P N+I  GSGN M LDVL +L +   LFE++ + +++DLG+ G+  I +L+ ++ +   D
Sbjct: 423 PVNAIWEGSGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAMQVALTD 482

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +G AR LTE++AL+++AA L R G   IAD F+E R      +T+ M+  R +A  IID+
Sbjct: 483 EGSARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDARMIIDT 542

Query: 558 LY 559
           LY
Sbjct: 543 LY 544


>gi|254720415|ref|ZP_05182226.1| acyl-CoA dehydrogenase family protein [Brucella sp. 83/13]
          Length = 551

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 268/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|319783702|ref|YP_004143178.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317169590|gb|ADV13128.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 542

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 267/539 (49%), Positives = 377/539 (69%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP   G NA+  D LL+ L   F   V +EL+ LG +VL+  AQELAR+AN  
Sbjct: 2   TDDVTNQPPPLTGGNAWRGDPLLIQLAERFSDPVRRELDGLGRFVLTQEAQELARLANVE 61

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L  +   G R D VEFHPA+HAL+RRS+ +GLH S+W+     + R+  H++RAAR 
Sbjct: 62  TPKLRTHDRQGRRIDVVEFHPAYHALMRRSVANGLHSSVWENGDTEIGRR--HQVRAARF 119

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL A+LE GHL   ++T+AS+ ALM +P++ ++WAP++ +R+YD + K P++KT + +G+
Sbjct: 120 YLTAELETGHLCPITMTNASLAALMASPKLFREWAPRVTTRKYDQSQKPPVEKTGLTLGM 179

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ ++   G Y L+GHKWF+S+PMSDAF++LAQ    + CFLVPR
Sbjct: 180 GMTEKQGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPR 239

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS NG  +QRLK+K+GNRSNA+ E+EF N  G ++G+       + DM  L  LD 
Sbjct: 240 VLGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDC 299

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI S + MR  LAEA+H+AR R V G  LI+QP+M+R +AD+ALD+AAATALSFRLA SF
Sbjct: 300 AIASSAIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATALSFRLARSF 359

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DEA S   EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE  +AR+YRE+P N
Sbjct: 360 DEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVN 419

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDVL +L +   LFE + + +++DLG+ G+  I +L+ ++ +   D+G 
Sbjct: 420 AIWEGSGNVMALDVLRVLGRAPGLFEDVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGS 479

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++AL+++AA L R G   IAD F+E R      +T+ M+  R +A  IID+LY
Sbjct: 480 ARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDARMIIDTLY 538


>gi|294853604|ref|ZP_06794276.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819259|gb|EFG36259.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 551

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 267/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN  +P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTESPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGIGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|23500342|ref|NP_699782.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161620660|ref|YP_001594546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|225629091|ref|ZP_03787124.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo]
 gi|254699834|ref|ZP_05161662.1| acyl-CoA dehydrogenase family protein [Brucella suis bv. 5 str.
           513]
 gi|254705906|ref|ZP_05167734.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254711133|ref|ZP_05172944.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           B2/94]
 gi|254712408|ref|ZP_05174219.1| acyl-CoA dehydrogenase family protein [Brucella ceti M644/93/1]
 gi|254715480|ref|ZP_05177291.1| acyl-CoA dehydrogenase family protein [Brucella ceti M13/05/1]
 gi|256015375|ref|YP_003105384.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029514|ref|ZP_05443128.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M292/94/1]
 gi|260167395|ref|ZP_05754206.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|23463957|gb|AAN33787.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161337471|gb|ABX63775.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|225615587|gb|EEH12636.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo]
 gi|255998035|gb|ACU49722.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
          Length = 551

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 267/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|148558419|ref|YP_001257585.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148369704|gb|ABQ62576.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 551

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 266/550 (48%), Positives = 364/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD   S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMTASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|256157709|ref|ZP_05455627.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|256253319|ref|ZP_05458855.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
          Length = 551

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 266/550 (48%), Positives = 364/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|256059209|ref|ZP_05449415.1| acyl-CoA dehydrogenase family protein [Brucella neotomae 5K33]
          Length = 551

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  ++ ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|163844750|ref|YP_001622405.1| hypothetical protein BSUIS_B0595 [Brucella suis ATCC 23445]
 gi|163675473|gb|ABY39583.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 551

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 266/550 (48%), Positives = 364/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+L R+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLVRLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|17989016|ref|NP_541649.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|62317545|ref|YP_223398.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269526|ref|YP_418817.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|225686384|ref|YP_002734356.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|237817093|ref|ZP_04596085.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254691042|ref|ZP_05154296.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 6 str.
           870]
 gi|254695651|ref|ZP_05157479.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698826|ref|ZP_05160654.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732273|ref|ZP_05190851.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 4 str.
           292]
 gi|256043495|ref|ZP_05446422.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256111485|ref|ZP_05452499.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256256227|ref|ZP_05461763.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 9 str.
           C68]
 gi|297249584|ref|ZP_06933285.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|17984855|gb|AAL53913.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|62197738|gb|AAX76037.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939800|emb|CAJ12808.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain [Brucella melitensis
           biovar Abortus 2308]
 gi|225642489|gb|ACO02402.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|237787906|gb|EEP62122.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|297173453|gb|EFH32817.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 551

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 267/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P N+I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR 
Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R 
Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARH 538

Query: 550 NAAHIIDSLY 559
           NA  IID LY
Sbjct: 539 NAMRIIDQLY 548


>gi|265985434|ref|ZP_06098169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839008|ref|ZP_07471829.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
 gi|306845932|ref|ZP_07478499.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|264664026|gb|EEZ34287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306273567|gb|EFM55412.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306405914|gb|EFM62172.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
          Length = 542

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 264/539 (48%), Positives = 360/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|227821660|ref|YP_002825630.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227340659|gb|ACP24877.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 550

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 306/548 (55%), Positives = 399/548 (72%), Gaps = 2/548 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           MNQ+++    L  LNQP  + G+NAY SD L+V + +  P  +  E + LG YV S  AQ
Sbjct: 1   MNQMNRTEQKLAELNQPKPWSGINAYRSDPLMVDITSAMPKPLRDEFDALGRYVTSPEAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELARMAN   P+L  +GP GER D VEFHPAWHAL+RRS+  GLH S W+    P  R +
Sbjct: 61  ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWEN--LPDERGR 118

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +HK RA R YL AQLE GHL   ++TSAS+ A+  +P V K+WAPKI SR+YD TN+  M
Sbjct: 119 SHKARAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSTNRPWM 178

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           QK++V IG+G+TEK+GGTD+ A TS  +++ +GIY L+GHKWF+S+PMSDAF+MLAQ   
Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLNGHKWFMSAPMSDAFVMLAQTRE 238

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +GCFLVPRLLEDG  NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG  +     + D
Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  L  LD A+ S   MR SLAEA+H+ R R+V G  L+ QP+M R +AD+ALD+AAA+A
Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRNVFGKSLVSQPMMTRVLADMALDVAAASA 358

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LSFRLA +FD A   +++AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A
Sbjct: 359 LSFRLAEAFDNAHGSADDAAYARIMTPVAKYWCCKIAPALIYEAMECLGGNGYVEERALA 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           RHYRE+P N+I  GSGN M LDVL +L +   LFEQLF    +DLG +G K I +LR ++
Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFGVFSRDLGPAGPKTIDVLRAAM 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           SLC+ D+G AR L E++ALA++AA LYR G   IAD FLE+R      +T+ ML  RF++
Sbjct: 479 SLCERDEGAARLLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRATYGMLDSRFDS 538

Query: 552 AHIIDSLY 559
           A+++D LY
Sbjct: 539 AYVLDLLY 546


>gi|306841754|ref|ZP_07474440.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306288159|gb|EFM59546.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 542

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 264/539 (48%), Positives = 360/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQTGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A T++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWIGGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|260568114|ref|ZP_05838583.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261217215|ref|ZP_05931496.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261313335|ref|ZP_05952532.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318724|ref|ZP_05957921.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320086|ref|ZP_05959283.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261750308|ref|ZP_05994017.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261756805|ref|ZP_06000514.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986522|ref|ZP_06099079.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|260154779|gb|EEW89860.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260922304|gb|EEX88872.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292776|gb|EEX96272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297947|gb|EEY01444.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261302361|gb|EEY05858.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736789|gb|EEY24785.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740061|gb|EEY27987.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|264658719|gb|EEZ28980.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 542

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 263/539 (48%), Positives = 359/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|261220435|ref|ZP_05934716.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265996214|ref|ZP_06108771.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260919019|gb|EEX85672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262550511|gb|EEZ06672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 542

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 262/539 (48%), Positives = 358/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|261323158|ref|ZP_05962355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261299138|gb|EEY02635.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 542

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 262/539 (48%), Positives = 359/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  ++ ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539


>gi|189022800|ref|YP_001932541.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260544781|ref|ZP_05820602.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260564690|ref|ZP_05835175.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260756638|ref|ZP_05868986.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760068|ref|ZP_05872416.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763307|ref|ZP_05875639.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882455|ref|ZP_05894069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261216051|ref|ZP_05930332.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|265989913|ref|ZP_06102470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265992982|ref|ZP_06105539.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265999102|ref|ZP_05465007.2| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|189021374|gb|ACD74095.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260098052|gb|EEW81926.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260152333|gb|EEW87426.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260670386|gb|EEX57326.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673728|gb|EEX60549.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676746|gb|EEX63567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260871983|gb|EEX79052.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917658|gb|EEX84519.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|262763852|gb|EEZ09884.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000582|gb|EEZ13272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092211|gb|EEZ16508.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410756|gb|ADZ67820.1| Acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554048|gb|ADZ88687.1| Acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 542

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 263/539 (48%), Positives = 359/539 (66%), Gaps = 2/539 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  AQ+LAR+AN  
Sbjct: 3   THEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTE 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R+  H+ RAAR 
Sbjct: 63  LPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGRR--HQARAARF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K   +K  V +G+
Sbjct: 121 YLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ +  + CFL+PR
Sbjct: 181 GMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPR 240

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           L E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        + DM  L  LD 
Sbjct: 241 LGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDC 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A ATALS RLA +F
Sbjct: 301 AVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAF 360

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N
Sbjct: 361 DMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           +I  GSGN M LDV  +L +   LF+ +   +   LG  G+  I +LR ++ L + D+G+
Sbjct: 421 AIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGV 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           AR LTE++A A++AA L + G +DIAD F+E R      +T+ ML  R NA  IID LY
Sbjct: 481 ARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARHNAMRIIDQLY 539


>gi|153010986|ref|YP_001372200.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562874|gb|ABS16371.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 530

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 258/529 (48%), Positives = 357/529 (67%), Gaps = 2/529 (0%)

Query: 31  FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
             G NAY  D LL+ + A FP  +H +LE  G +V S  AQ+LAR+AN   P+L  +   
Sbjct: 1   MTGNNAYLGDPLLMQIAAGFPKELHADLEQTGRFVSSAEAQDLARLANTELPKLRTHDRQ 60

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G R D VE+HPA+HAL+RRSI  GLHCSIW+ +     R+  H+ RA+R +L AQLEAGH
Sbjct: 61  GNRIDLVEYHPAYHALMRRSIAAGLHCSIWEGNPLESGRR--HQARASRFFLTAQLEAGH 118

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   ++TSAS+ ALM +P ++K+W+P I SR YD + K    K  + +G+G+TEK+GGTD
Sbjct: 119 LCPLTMTSASLAALMASPEIYKEWSPVILSRRYDFSQKPAFAKQGITLGMGMTEKQGGTD 178

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + A T++  +  DG Y ++GHKWF+S+PMSDAF+ LAQ E  + CFL+PRL  +GS NG 
Sbjct: 179 VRANTTRATRNDDGTYAITGHKWFMSAPMSDAFLTLAQAEEGLSCFLLPRLTSEGSGNGF 238

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +QRLK+K+GN+SNA+ E+EF    G L+G+       + DM  L  LD AI S   MR 
Sbjct: 239 FFQRLKDKLGNKSNASSEVEFDGAIGHLIGNPGEGVKTIMDMVTLTRLDCAIASAGLMRS 298

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            LAEA+H++R R V G  L++QP+M+R +AD+ALD+A ATALS RLA +FD A S   EA
Sbjct: 299 GLAEAVHHSRYRQVFGKALVEQPLMQRVLADMALDVAGATALSMRLARAFDMAASDRAEA 358

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIEE ++AR YRE+P N+I  GSGN M
Sbjct: 359 AFARCMTPVVKYWVCKIAPALLYEAMECLGGNGYIEEGNLARAYREAPVNAIWEGSGNVM 418

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
            LDV  +L +   LF+++   +   LG  G+  + +LR ++ L + D G+AR LTE++A 
Sbjct: 419 ALDVARVLSRAPGLFDEVLEWIGGQLGPRGQGTLDVLRAALQLTETDPGVARLLTEQLAY 478

Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           A++AA L + G +++AD F+E R      ST+ ML  R NA  I+D LY
Sbjct: 479 AAAAAELRQIGADNVADAFIETRLGGQWRSTYGMLDARHNAERILDQLY 527


>gi|257057805|ref|YP_003135637.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587677|gb|ACU98810.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 548

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 193/543 (35%), Positives = 292/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
             +    NQ P  +  +     +LL +L          ++  LG    S  AQE  R+AN
Sbjct: 2   PPTHEVTNQVPPLVDYDVADDPALLESLRREGADWAEPKVRELGVLAGSEQAQEWGRLAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VEFHP WH L+  ++  GLH + W +      R  AH  RAA
Sbjct: 62  ENPPVLHTHDRVGRRIDEVEFHPYWHQLMATAVSHGLHAAPWRQD-----RPGAHVARAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + Y+ +Q+EAGH    S+T +++ AL     + KD+ P + +  YD   + P  K  +  
Sbjct: 117 KFYVWSQVEAGHTCPISMTYSAVPALRYNAELAKDYEPLLAAPHYDFGLRVPTTKRGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+   T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + CFL+
Sbjct: 177 GMSMTEKQGGSDVRTNTTRAVPTEDGTYRLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLL 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N + +QRLK+K+GNRSNA+ E+E+    G+L+G+       + +M     L
Sbjct: 237 PRVLPDGTRNAIHFQRLKDKLGNRSNASAEVEYDGAVGWLIGEEGRGVRTIIEMVNNTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR     A+H+A  R   G  L+ QP+M   +AD+A++  AAT ++ RLA 
Sbjct: 297 DCVIGSAAAMRYGTVRAVHHATHRAAFGAPLVRQPLMTNVLADLAVEAEAATMVALRLAG 356

Query: 379 SFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +   +EAA+ R    ++KYW CK +PA  AEA+EC+GG+GY+EE  + R +RES
Sbjct: 357 ATDRAVAGDHQEAAFRRFALSVSKYWVCKRSPAHAAEALECLGGNGYVEESGMPRLFRES 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  SI  GSGN   LD L  + K     +   + +E   G+  +  + IT +R  +    
Sbjct: 417 PLLSIWEGSGNVTALDTLRAMAKQPESVDAFLAEVESARGADPRLDEAITSVRRDLGDPD 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           E +  AR L E++AL    + L R G   +AD F  +R   +  +    L    +   ++
Sbjct: 477 EIEFRARRLVERLALVLQGSLLVRHGDKSVADAFCASRLGGDWGAAFGTLPRGVDTEAVL 536

Query: 556 DSL 558
              
Sbjct: 537 ARA 539


>gi|110633713|ref|YP_673921.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110284697|gb|ABG62756.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 543

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 265/537 (49%), Positives = 364/537 (67%), Gaps = 2/537 (0%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
             LNQPP   G NA+  D LLV L   F   V K++E LG +V +  AQELAR+AN   P
Sbjct: 5   EVLNQPPPISGTNAWRGDPLLVQLCERFSEPVRKDVEQLGRFVRTQEAQELARLANTELP 64

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            L  +   G R D+VE+HPA+HAL+RRS   GLH SIW+       + Q H+ RAAR YL
Sbjct: 65  VLKTHDRYGFRVDQVEYHPAYHALMRRSASAGLHSSIWED--GEDEKGQRHQARAARFYL 122

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            AQLE GHL   ++TSA++ ALM+ P + + WAP++ +R+YD  N+   QK  V +G+G+
Sbjct: 123 TAQLECGHLCPMTMTSAALAALMSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGM 182

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GGTD+ A T++ +   +G+Y L+GHKWF+S+PMSD F++LAQ E  + CFL+PR+ 
Sbjct: 183 TEKQGGTDVRANTTRAEPAGEGLYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVT 242

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +DG+ NG  +QRLK+K+GNRSNA+ E+EF    G+L+G+       + DM  L  LD A+
Sbjct: 243 DDGATNGFRFQRLKDKLGNRSNASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCAL 302

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR +LAEA+H+AR R V G  L +QP+M R +AD+ALD+AAATAL+FRLA SFDE
Sbjct: 303 ASSGLMRAALAEAVHHARHRSVFGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDE 362

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A +   EAAYAR+M P+TKYW CK+APAVI EAMEC+GG+GY+EE  +AR+YRE+P N+I
Sbjct: 363 AANGRAEAAYARVMTPVTKYWVCKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAI 422

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             GSGN M LDVL +L +   LF+ +   +  DLG +G   + +L  ++ +C+ D+G  R
Sbjct: 423 WEGSGNVMALDVLRVLSRNAGLFDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGR 482

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            LTE++ALA++AA L R G   +AD F+E R       T+ ML  R++A  I+D LY
Sbjct: 483 ILTEQLALAAAAAELKRLGAGQVADAFIETRLAGQWRGTYGMLDARYDAVAILDMLY 539


>gi|298246748|ref|ZP_06970553.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297549407|gb|EFH83273.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 552

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 196/553 (35%), Positives = 289/553 (52%), Gaps = 12/553 (2%)

Query: 12  MNQVHQPS-DSLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSVVHKELELLGEYVLSCT 69
           M+    P+  +    NQPP  +  N ++ DS LVA +         + L  LG Y+ S  
Sbjct: 1   MDVFAHPAISTHTVANQPPPLVQYNPFTLDSALVAGIQREGAGWAEERLSELGRYLGSSE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                  AN   P+LH +   G R D+V FHPAWH L+  +++ G H   W        R
Sbjct: 61  VITQGFEANTYPPELHTHDRYGHRIDEVSFHPAWHQLMGAAVNWGTHALSWRED-----R 115

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             A   RAA  YL  Q+EAGH    S+T A++  L   P + + W P + S EYD   + 
Sbjct: 116 PGAQVARAAGFYLFTQVEAGHGCPISMTHAAIPVLRHQPELAETWLPGLLSLEYDFGLRP 175

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPMSDAFIML 246
             +K  +  G+G+TEK+GG+D+ A T++     +   G Y L+GHKWF S+PM D F++L
Sbjct: 176 ATEKRGLLCGMGMTEKQGGSDVRANTTRAVPAGELGAGTYLLTGHKWFCSAPMCDVFLVL 235

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CFL+PR+L DG+ N    QRLK+K+GNRSNA+ E EF  T  FL+G+     
Sbjct: 236 AQAPGGLSCFLLPRVLPDGTRNSFFIQRLKDKLGNRSNASSEAEFQQTVAFLVGEEGQGV 295

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD  + S + MR +L +A+H+ R R   G  L+DQ +M+  +AD++L++
Sbjct: 296 RTIIEMVNYTRLDCILGSTAMMRQALTQALHHTRHRQAFGRPLLDQSLMRNVLADLSLEV 355

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ RLA + D+A + + E    R+   + KYW  K  P  +AEA+EC+GG+GY+E
Sbjct: 356 EAAITLALRLARACDQAPTSTHEEHIKRLGTALGKYWVTKRGPTCVAEALECLGGNGYVE 415

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVI 484
           E  + R YRE P NSI  GSGN   LDVL  L K   + E  F+ +     ++      +
Sbjct: 416 ESIMPRLYREMPLNSIWEGSGNVNCLDVLRALAKQPQVLESFFTEVAPARAANKHLSDAV 475

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             L+  +S     +  ARFL E++AL    A L +     +AD F  +R           
Sbjct: 476 QALQQELSHLDNIEWRARFLVERMALILQGALLVQHAPAPLADAFCTSRLGGTWGHAFGT 535

Query: 545 LHGRFNAAHIIDS 557
           L    ++  I+  
Sbjct: 536 LPPGIDSQAILAR 548


>gi|154253277|ref|YP_001414101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157227|gb|ABS64444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 563

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 203/548 (37%), Positives = 308/548 (56%), Gaps = 10/548 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP    +N ++SD  L   +           L   G+ V S    +L R AN 
Sbjct: 13  THEVFNQPPPLEDVNLFTSDKALRETVAREGAGDAEASLTAFGKIVGSAETIDLGRQANA 72

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR---SFEPVVRKQAHKIR 136
             P L ++   G R D+VEFHP++H L+  S+  GLH S WD      +   +  A   R
Sbjct: 73  YLPVLKSFDRFGHRADRVEFHPSYHKLMAISVAQGLHGSPWDHLKNGLDASPKPGAVVAR 132

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A  Y+M Q+EAGH    ++T+AS+ AL+  P + K+W P+I SREYD       +K  V
Sbjct: 133 LAGTYMMTQVEAGHGCPITMTNASVPALLFQPSLAKEWIPRILSREYDERFIPAGEKAGV 192

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
            +G+G+TEK+GGTD+ A T++   ++ G     Y ++GHKWF S+PM DAF++LAQ    
Sbjct: 193 TLGMGMTEKQGGTDVRANTTEAVPVNGGGPGAEYRITGHKWFFSAPMCDAFLVLAQAPNG 252

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFL+PR   DG PN +  QRLK+K+GN+SNA+ E+EF    G+L+G+       + +M
Sbjct: 253 ISCFLMPRFTPDGEPNAIRIQRLKDKVGNKSNASSEVEFQAASGWLIGEEGRGVRNIIEM 312

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD A+ +   MR ++++A+H+   R V    LIDQP+M   +AD+AL+  AATAL
Sbjct: 313 ATYTRLDCAVATAGMMRQAVSQAVHHCSYRTVFQKKLIDQPLMANVLADLALETEAATAL 372

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           SFR+A SFD A     EAA+ RIM P+ KYW CK AP +  EAMEC+GG+GY+EE    R
Sbjct: 373 SFRVARSFDRAHEDEAEAAFRRIMTPVAKYWVCKRAPNLAYEAMECLGGNGYVEEGIAGR 432

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            YRE P N+I  GSGN M LDVL  L +     + +F+ L++  G++      +  L+++
Sbjct: 433 IYREMPVNAIWEGSGNVMCLDVLRALMREPQALDVVFAELDRAKGANAAYDGALDALKEA 492

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
            +     +G +R + E++A  ++ + L +   + ++D +   R   +    +  L    +
Sbjct: 493 FADFGSLEGRSRQVVEQMAKVAAGSVLLQHAPSFVSDAYCATRLGRDWGDLYGTLPAGAD 552

Query: 551 AAHIIDSL 558
            A I++  
Sbjct: 553 IAAIVERA 560


>gi|54026985|ref|YP_121227.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018493|dbj|BAD59863.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 540

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 195/544 (35%), Positives = 282/544 (51%), Gaps = 7/544 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            +    NQ P  +  +   + +LL  L          E+  LG       AQE  R+AN 
Sbjct: 2   QTHEVFNQVPNIVPFDVSRNPALLEGLHREGAGWAEAEVRELGALAGGERAQEWGRLANE 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P LH +   G R D+VEFHP WH L+  ++  GLH + W        R  AH  RAA+
Sbjct: 62  YPPVLHTHDRYGHRIDEVEFHPYWHELMTVAVGHGLHAAPWLDE-----RPGAHVARAAK 116

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            Y     +AGH+   S+T A++ AL   P +   + P + SR YD   + P  K  +  G
Sbjct: 117 FYTWGAADAGHMCPISMTYAAVPALRHNPELAAKYEPLLGSRVYDFGLREPTGKAGLIAG 176

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T+      DG Y + GHKWF S+PMSD F+ LAQ  G + CFL+P
Sbjct: 177 MSMTEKQGGSDVRANTTTATPQPDGTYRIVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLP 236

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N +  QRLK+K+GN+SNA+ E+E+ N  G+L+G        + +M  +  LD
Sbjct: 237 RVLPDGTRNPIRIQRLKDKLGNKSNASSEIEYENATGWLVGPEGHGVKTIIEMVNMTRLD 296

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR +   A+H+AR R   G  LIDQP M+  +AD+ ++  AAT +  RLA +
Sbjct: 297 CVIGSATNMRQATVHAVHHARHREAFGAKLIDQPAMRNVLADLVIESDAATTVMMRLAGA 356

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A     EA   RI   +TKYW CK AP + AEA+EC+GG+GY EE  + R YRESP 
Sbjct: 357 TDRAAHDPAEANLRRIALAVTKYWVCKRAPMLTAEALECLGGNGYAEESGMPRLYRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
            SI  GSGN   LD L  + +  +     F  + +  G + +    I  +   ++   + 
Sbjct: 417 MSIWEGSGNVAALDALRAMGRQPDTVAAYFDEVNKSRGDNPRLDDAIDRVGKELADLSDI 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E +AL    A L R G   +AD F   R  D+       L    +   II+ 
Sbjct: 477 EYRARRVVELMALVLQGAQLVRHGHRAVADAFCATRLGDDWGIAFGTLPTGVDTESIIER 536

Query: 558 LYLD 561
            +++
Sbjct: 537 AFVE 540


>gi|254474156|ref|ZP_05087547.1| probable AidB protein [Pseudovibrio sp. JE062]
 gi|211956686|gb|EEA91895.1| probable AidB protein [Pseudovibrio sp. JE062]
          Length = 551

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 228/550 (41%), Positives = 342/550 (62%), Gaps = 4/550 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS--VVHKELELLGEYVLSCT 69
           M++V Q + +   +NQ P + G N   SD +L+A +    S     +EL   GE   +  
Sbjct: 1   MDKVSQATMTTGVINQAPPYCGYNLAESDPILLADLGGTGSNDSAREELIKFGEQCGAAD 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A +L R+AN N P L  + P G R D VEFHP++HAL+RRS   GLH +  +        
Sbjct: 61  ALDLGRLANVNEPVLKTHDPYGRRLDVVEFHPSYHALMRRSFEAGLHSASVES--MEPGG 118

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +A   RA + ++M+Q+E GHL   ++T+AS +AL   P + K W  +I SR+YD   + 
Sbjct: 119 DRAFYNRARKYFVMSQVEGGHLCPVTMTNASAMALTQAPELAKVWNERILSRKYDQRFRP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             QK  V++G+G+TEK+GG+D+  I ++ +K+SD  Y ++GHKWF S+PM DAF++LA++
Sbjct: 179 ASQKMGVSLGMGMTEKQGGSDLRQIITRAEKVSDDTYVINGHKWFFSAPMCDAFLVLAKL 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E    CFLVPR+LE G  NGL +QRLKNK+GN+SNA+ E+EF+N  GFL+G+       +
Sbjct: 239 EEGPTCFLVPRILESGEVNGLDFQRLKNKLGNKSNASSEVEFNNAVGFLVGEAGKGIKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M     +D  I S + MR +++ A+H+   R   G  LI++P+M+R +AD++LD+AA+
Sbjct: 299 LKMVTPTRVDCCIGSAALMRAAISRAVHHTSNRSAFGARLIEKPLMQRVLADMSLDMAAS 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL+ +LA+  D+    S+ A + RI+ P  KYW CK A  V AEAMEC+GG+GY+E+  
Sbjct: 359 EALALKLAHCMDQEGEDSQAADFLRIITPAAKYWICKSAENVAAEAMECLGGNGYVEDHD 418

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR YRE+P NSI  GSGN M LD+L  + +  + F  +   LE DLG +GK  + +L+ 
Sbjct: 419 MARIYREAPVNSIWEGSGNIMALDLLRAMHRTPDSFMNVLGMLEADLGPAGKVSVEVLQA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           +   C ED+G AR LTE++A+ ++AAAL       IA+ F+E R      S++ ML  R+
Sbjct: 479 AARTCLEDEGGARLLTEQLAITAAAAALKEVAPAAIANAFIETRMAGQWRSSYGMLDARY 538

Query: 550 NAAHIIDSLY 559
           +A  I++ LY
Sbjct: 539 DAMGILEWLY 548


>gi|240167672|ref|ZP_04746331.1| acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 542

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 192/543 (35%), Positives = 281/543 (51%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            D+    NQ P     N+ +S  L+ ALI         E+  LG       AQ    +A+
Sbjct: 2   PDTHVVTNQVPPLENHNSATSPMLVEALIREGGQWGLDEVNELGAISGGHEAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPVLHTHDRVGHRIDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +    E GH+   S+T A + AL   P +   + P + SREYDP  K    K  +  
Sbjct: 117 KASVWTP-EPGHVCPISMTYAVVPALRHNPELASVYEPLLTSREYDPEFKLATTKRGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++     DG Y L+GHKWF S+PM D F++LAQ    + CF++
Sbjct: 176 GMSMTEKQGGSDVRAGTTEATPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPKGLSCFML 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355

Query: 379 SFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A     +EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDNAARGDLKEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L Q  G   +    +  LR+ +    
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDDLAQSAGQDARLDGHVERLREQLGDLD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR + E I LA   + L R G   +A+ FL  R           L    + A I+
Sbjct: 476 TIQYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRLGGQWGGAFGTLPTGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|118472712|ref|YP_885773.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173999|gb|ABK74895.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 551

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 194/541 (35%), Positives = 280/541 (51%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P     N  +S  L  ALI         E+  LG    S  AQ    +A+ N
Sbjct: 13  THAVTNQVPPLEDYNPATSPVLTEALIREGGEWGLDEVHALGALSGSRQAQRWGELADRN 72

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH +RAA+ 
Sbjct: 73  RPILHTHDRYGHRIDEVEYDPAYHELMSVAVSYGLHAAPWADD-----RPGAHVVRAAKT 127

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    E GH+   S+T A + AL   P + K + P + SR YDP  K P  K  +  G+
Sbjct: 128 SVWTP-EPGHICPISMTYAVVPALRFNPELAKIYEPLLTSRVYDPELKIPTTKLGITAGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR
Sbjct: 187 SMTEKQGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPR 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG  N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD 
Sbjct: 247 ILPDGRRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDC 306

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S + MR  L+ A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A + 
Sbjct: 307 TLGSATSMRNGLSRAVHHAQHRKAFGAYLIDQPLMRNVLADLAIEAEAATMLAMRMAGAT 366

Query: 381 DEAKSRSEEAAYARIMAPIT-KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D+A    E     R +     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P 
Sbjct: 367 DKAVHGDEREKLLRRIGLAAGKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPL 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
             I  GSGN   LD L  +       E LF  L Q  G   +    +  L+  +   +  
Sbjct: 427 MGIWEGSGNVSALDTLRAMATRPECVEVLFDELGQTAGHDERLDAHVATLQRDLGELETI 486

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E I+LA   + L R G   +A+ FL +R      S    L    + A II+ 
Sbjct: 487 QYRARKVAEDISLALQGSLLVRHGHPAVAEAFLASRLGGQWGSAFGTLPTGLDLAPIIER 546

Query: 558 L 558
            
Sbjct: 547 A 547


>gi|296270222|ref|YP_003652854.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093009|gb|ADG88961.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 534

 Score =  508 bits (1309), Expect = e-141,   Method: Composition-based stats.
 Identities = 194/539 (35%), Positives = 291/539 (53%), Gaps = 8/539 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  +G +  +  +LL  L         +E+  LG    +  AQE  R+AN  
Sbjct: 2   THEVFNQVPPLVGHDVAADAALLEGLAREGAGWAAEEIHRLGVLAGTAEAQEWGRLANEY 61

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHPAWH L+  ++ +GLH + W        R  AH  RAA+ 
Sbjct: 62  PPVLRTHDRYGHRIDEVEFHPAWHQLMTVAVENGLHAAPWASD-----RPGAHVARAAKF 116

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           ++ +Q+EAGH    S+T +++ AL  +P +  +W P++ S  YD   + P +K  +  G+
Sbjct: 117 FIWSQVEAGHGCPISMTYSAVAALRHSPELRAEWEPRLTSCAYDFGLRPPAEKRGILAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ + T++ + + DG Y L+GHKWF S+PM D F +LAQ  G + CFL+PR
Sbjct: 177 AMTEKQGGSDVRSNTTKAEPLGDGTYALTGHKWFNSAPMCDIFFVLAQAPGGLSCFLLPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+     +L+G+       + +M  +  LD 
Sbjct: 237 VLPDGTRNAMRLIRLKDKLGNRSNASAEVEYEGAIAYLVGEEGRGVRTIIEMVNMTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S +GMR  L +A+H+A+ R V G +LIDQP+M+  +AD+AL+  AAT L  RLA + 
Sbjct: 297 VIGSAAGMRFGLTQALHHAKHRRVFGKLLIDQPLMRAVLADLALESEAATTLMLRLAGAT 356

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A    E EA + R      KYW  K  P   AEA+EC+GG+GY+E+  + R  RESP 
Sbjct: 357 DRAIRGDEAEALFRRAALAAAKYWVTKRGPVHAAEALECLGGNGYVEDSQMPRLLRESPV 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           NS+  GSGN   LDVL +L +     E  F+ +     +   K    LR  ++   E   
Sbjct: 417 NSVWEGSGNVAALDVLRVLARQPEAVEAFFAEVALAGDARITKAADRLRALLASATE--A 474

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            AR + E++ L   A+ L R     +AD F   R           L    +   I++  
Sbjct: 475 DARRIAEEMTLLLQASLLVRHAPAAVADAFCATRLSGEWGRAFGTLPSGLDLEAILERA 533


>gi|126348365|emb|CAJ90087.1| putative oxidoreductase [Streptomyces ambofaciens ATCC 23877]
          Length = 567

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 201/540 (37%), Positives = 286/540 (52%), Gaps = 7/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP     +A+   +L   L         +EL  LG    S  AQE   +AN +
Sbjct: 28  THDVTNQPPPLAPYDAFDDTALREGLRREGAGWAEEELRRLGRRAGSVAAQEWGDLANRH 87

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A  
Sbjct: 88  EPVLRTHDRYGNRVDEVEYHPSWHRLMRVAVGEGLAGAPWADD-----RPGAHVARTAGG 142

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    EAGH    S+T A++ AL   P + K + P + SREY+P  + P +K  +  G+
Sbjct: 143 LVWGHTEAGHGCPTSMTYAAVPALRAQPDLAKVYEPLLTSREYEPGLRTPTEKRGLLAGM 202

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+   T+      + G+Y L GHKWF S+PM D F++LAQ  G + CFLVP
Sbjct: 203 GMTEKQGGSDVRTNTTAATPTGEPGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVP 262

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD
Sbjct: 263 RVLPDGGRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLD 322

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 323 CVMSSATLMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGA 382

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P
Sbjct: 383 ADRAVRGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAP 442

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             SI  GSGN   LDVL  L +       LF+ L    G+  +    + R    L +  +
Sbjct: 443 LLSIWEGSGNVNALDVLRALGRSPAAAHALFAELALARGADARLDTAVSRLESGLAEASE 502

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR L E++AL   A+ L R     +AD F  +R   +   +   L    +   I+   
Sbjct: 503 TGARRLVEQMALTLQASLLVRHAPPAVADAFCASRLGGDWGHSFGTLPAGADLDGILARA 562


>gi|297203226|ref|ZP_06920623.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|197711310|gb|EDY55344.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
          Length = 544

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 197/546 (36%), Positives = 289/546 (52%), Gaps = 18/546 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELAR 75
           +    NQPP   G + Y +D  L   +           VH EL  LG    S   QE   
Sbjct: 5   THTVTNQPPPLTGYDVYGADRALKEAVERHLDPALLDEVHGELAALGRACGSAQVQEWGL 64

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN N P+L  +   G R D+VEFHPAWH +L + +  GL  +          R   H +
Sbjct: 65  QANENPPRLRTHDRYGHRVDEVEFHPAWHRVLGKGVSAGLTAA--------WARSGGHVL 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA   L  Q++AG     S+T A++ AL T P +  +W P++ S  YD   +    K  
Sbjct: 117 RAAAFVLWTQVDAGSCCPLSMTHAAVPALRTDPDLAAEWEPRLTSMVYDRELRPAHLKAG 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
              G+G+TEK+GG+D+ A T+  + + DG  Y L+GHKWF S+PMSD F++LAQ  G + 
Sbjct: 177 ALFGMGMTEKQGGSDVRANTTSARPLPDGETYELTGHKWFCSAPMSDGFLVLAQAPGGLT 236

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + +M  
Sbjct: 237 CFLVPRVLEDGTRNTFLLQRLKDKLGNRSNASAEVEFDRTWARRVGDEGRGVRTIIEMVA 296

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AAT L+ 
Sbjct: 297 ATRLDCVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLALESEAATTLAL 356

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D      +E A  RI  P  KYW  K    + AEA EC+GG+GY+EE  + R  
Sbjct: 357 RLAAAYDN--DDEQERALLRIAVPTAKYWITKRCTPLTAEAAECLGGNGYVEESGMPRLV 414

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RESP NS+  G+GN   LDVL +L++           + +  G+  +       L   ++
Sbjct: 415 RESPLNSVWEGAGNIQALDVLRVLQREPQALNAYLLEIGRTRGADHRLDAATKSLFTELA 474

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +  +G AR LTE++AL    + L R    ++AD F  +R   +  ++   L    + A
Sbjct: 475 DLEGIEGRARHLTERLALVLQGSLLVRHAPAEVADAFCASRLGGDGGASFGTLPTTLDLA 534

Query: 553 HIIDSL 558
            ++D  
Sbjct: 535 SVVDRA 540


>gi|118616537|ref|YP_904869.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
 gi|118568647|gb|ABL03398.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
          Length = 553

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 193/545 (35%), Positives = 286/545 (52%), Gaps = 9/545 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           + SD+    NQ PL    N  +S  L+ ALI        +E+  LG    S  AQ    +
Sbjct: 11  RMSDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGSAQAQRWGEL 70

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+ N P LH +   G R D+VEF PA+H L+R +I  GLH + W        R  AH +R
Sbjct: 71  ADRNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD-----RPGAHVVR 125

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA+  +   +E GH+   S+T A + AL   P +   + P + SREYDP  +    K  +
Sbjct: 126 AAKTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLASTKPGI 184

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             G+ +TEK+GG+D+ A T+Q    SDG Y L+GHKWF S+PM D F++LAQ  G + CF
Sbjct: 185 TAGMSMTEKQGGSDVRAGTTQATPNSDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCF 244

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           ++P +L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L 
Sbjct: 245 MLPHILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+
Sbjct: 305 RLDCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATTVAMRM 364

Query: 377 ANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A + D+A +    EA +  I    +KYW CK +    AEA+EC+GG+GY+EE  + R YR
Sbjct: 365 AGATDKAVRGDQTEALFRGIGLAASKYWVCKRSTPHAAEALECLGGNGYVEESGMPRLYR 424

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--ITILRDSISL 493
           E+P   I  GSGN   LD L  +       E LF  L    G   ++   +  LR  +  
Sbjct: 425 EAPLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHVEGLRRQLGD 484

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
            +     AR + E I LA   + L R G   + + FL  R           +    + A 
Sbjct: 485 LETIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRIGGQWGGAFGTMPTGLDLAP 544

Query: 554 IIDSL 558
           I++  
Sbjct: 545 ILERA 549


>gi|183981022|ref|YP_001849313.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183174348|gb|ACC39458.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 542

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 194/543 (35%), Positives = 287/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ PL    N  +S  L+ ALI        +E+  LG    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGSAQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VEF PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P +   + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLASTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    SDG Y L+GHKWF S+PM D F++LAQ  G + CF++
Sbjct: 176 GMSMTEKQGGSDVRAGTTEATPNSDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATTVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA + RI    +KYW CK +    AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 356 ATDKAVRGDQTEALFRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEESGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--ITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L    G   ++   +  LR  +   +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHVEGLRRQLGDLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR + E I LA   + L R G   + + FL  R           +    + A I+
Sbjct: 476 TIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRIGGQWGGAFGTMPTGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|111021227|ref|YP_704199.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820757|gb|ABG96041.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 545

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 188/543 (34%), Positives = 288/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           S +   +NQ P  +  +A     +L AL       V +EL  +G    S  AQ    +A 
Sbjct: 2   SATHEVVNQVPPLVNFDAADYPPILEALQREGAHDVLEELHDVGRLAGSEDAQRWGDLAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P L  +   G R D+VE+ PA+H L+  ++  GLH + W          +AH +RAA
Sbjct: 62  AHPPVLRTHDRYGNRIDEVEYDPAYHQLMTTAVEMGLHGAPWADPH-----PRAHLVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +  Q++AGH    S+T A + AL     + + + P + +R YDP    P+ K  +  
Sbjct: 117 KMAVWGQVDAGHGCPISMTYAVVPALRHNRELAQQYEPPLTARVYDPALHPPLTKAGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +
Sbjct: 177 GMSMTEKQGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFL 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  L
Sbjct: 237 PRVLPDGTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I + +GMRV  A+A H+A  R   G  L+DQP+M+  +AD+A++  AAT ++  LA 
Sbjct: 297 DCTIGTATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAA 356

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D A +  E A    RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 357 LTDRATAGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  S+  GSGN   LD L  + K     +  F  L+   G+  +    +  L+ S     
Sbjct: 417 PLLSVWEGSGNVAALDTLRAMAKQPETLQVFFDELDSTAGADARLDAAVADLKASFGDRD 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR +   +ALA   + L R G   +AD F  +R   +  +    L    + A II
Sbjct: 477 TLEHRARRVVGDMALALQGSLLIRHGHPAVADAFCVSRLSGDWGTVFGTLPTGVDTAAII 536

Query: 556 DSL 558
           D  
Sbjct: 537 DRA 539


>gi|291448671|ref|ZP_06588061.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351618|gb|EFE78522.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 558

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 196/548 (35%), Positives = 291/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D +L   +          V  +EL  LG    S  AQE 
Sbjct: 16  ATTHTVTNQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEW 75

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H
Sbjct: 76  GTQANAHPPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL--------TDAWGRPAGH 127

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL T P +  +W P + S  Y    + P +K
Sbjct: 128 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREK 187

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GG+D+ + T++ +     G Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 188 AGVLFGMGMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGG 247

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M
Sbjct: 248 LSCFLVPRVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEM 307

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++A+A+H++  R V GG LID+P+M+  +AD+AL+  AAT L
Sbjct: 308 VAATRLDCVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVL 367

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D       E A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 368 AMRLAAAYDA--DTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPR 425

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++           + +  G+  +    I  L   
Sbjct: 426 LLREAPLNSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTE 485

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +G AR L E+ AL    + L R    ++AD F  +R   +  +    L    +
Sbjct: 486 LADLDGVEGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRLGGDWGAAFGTLPHSLD 545

Query: 551 AAHIIDSL 558
            A ++   
Sbjct: 546 LASVVARA 553


>gi|118466870|ref|YP_883634.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118168157|gb|ABK69054.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 542

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 193/543 (35%), Positives = 285/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N   S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  ++   
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR + E I LA   + L R G   +A+ FL  R           +    + A I+
Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRLDRRWGGAFGTMPDGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|254776935|ref|ZP_05218451.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 542

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 193/543 (35%), Positives = 285/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N   S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  ++   
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR + E I LA   + L R G   +A+ FL  R           +    + A I+
Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRLDRRWGGAFGTMPDGLDLAAIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|302867552|ref|YP_003836189.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570411|gb|ADL46613.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 542

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 195/541 (36%), Positives = 287/541 (53%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   +NQ P  +G +     +L   +           L  LG       A E  R+AN +
Sbjct: 3   THEVVNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEH 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA  
Sbjct: 63  PPVLRTHDRYGNRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  + +AGH    S+T A++ AL  +P +   + P + +REYD   + P  K  +  G+
Sbjct: 118 YLW-RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYDFGLRPPQTKRGLLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR
Sbjct: 177 SMTEKQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD 
Sbjct: 237 VLPDGTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR  +  A+H+A  R   G  L DQP+M+  +AD+A++  AAT L  RLA + 
Sbjct: 297 VIGAAAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGAT 356

Query: 381 DE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  A+    E A+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRSARGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L +   +     + +    G+  +    +  +RD ++   + 
Sbjct: 417 NSIWEGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADVRLDAAVRRVRDELADHTDL 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E++AL    + L R G   +AD F  +R   +    +  L G  + A IID 
Sbjct: 477 ELRARRVVERLALVLQGSLLVRHGHPAVADAFCASRLDGDHGQAYGTLPGGLDLAAIIDR 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|300786591|ref|YP_003766882.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299796105|gb|ADJ46480.1| putative acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 546

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 196/546 (35%), Positives = 285/546 (52%), Gaps = 14/546 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P     +     +LL  L          EL  LG    +  AQE  R+ N N
Sbjct: 4   THEVTNQVPPLADHDVADDPALLAGLERAGAGWAAAELHELGRLAGTEQAQEWGRLVNEN 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHP WH L+R +   GLH + W        R+ AH  RAA+ 
Sbjct: 64  EPVLRTHDRYGNRIDEVEFHPHWHDLMRVATGHGLHGTPWQDP-----REGAHAARAAKF 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+  Q+EAGH    S+T A++ AL   P +   + P + + EYD   + P  K  +  G+
Sbjct: 119 YVWGQVEAGHSCPISMTYAAVPALRANPELAARYEPLLAATEYDFGLRDPATKRGLLAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKI------SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +TEK+GG+D+ A T+           SDG Y L GHKWF S+PM D F+ LAQ    + 
Sbjct: 179 SMTEKQGGSDVRANTTTATPSVSAVSRSDGSYTLVGHKWFTSAPMCDMFLTLAQAPNGLS 238

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL+PR+L DGS NG+  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       + +M  
Sbjct: 239 CFLLPRVLPDGSRNGILLQRLKDKLGNRSNASSEIEYDHAVGWLVGEEGRGVRTIIEMVN 298

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  + S SGMR+    A+H+A  R   G  L+DQP+M   +AD+ L+  AAT ++ 
Sbjct: 299 NTRLDCTLGSASGMRLGAVRAVHHATHRRAFGKALVDQPLMANVLADLVLESEAATTVAM 358

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA + D  +  ++E A+ R+   ++KYW CK AP   AEA+EC GG+GY+EE  + R Y
Sbjct: 359 RLAAAGDR-RGDAQEQAFRRLGLAVSKYWVCKRAPVHAAEALECFGGNGYVEESGMPRLY 417

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RE+P +SI  GSGN   LD L  + +        F+ +E+  G   +    +  +R  ++
Sbjct: 418 REAPLSSIWEGSGNVAALDALRAMGRQPESVAAFFAEVERAAGGDARLDDAVDRVRKELT 477

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
                +  AR L E +AL    + L R G   +AD F  +RF  +       L    +  
Sbjct: 478 DLDGIEYRARRLVEAMALVLQGSLLVRHGHPAVADAFCASRFGGDWGIAFGTLPAGVDTG 537

Query: 553 HIIDSL 558
            II+  
Sbjct: 538 AIIERA 543


>gi|297191205|ref|ZP_06908603.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150822|gb|EDY62427.2| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 549

 Score =  501 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/553 (35%), Positives = 294/553 (53%), Gaps = 23/553 (4%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQPP  +G + +++D  L   +             +EL  LG    S  AQE 
Sbjct: 3   ASTHTVTNQPPPLVGYDVFTADRALAEAVDRHVAAEAGDAAREELSGLGRAAGSAEAQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              A+ N P+L  +   G R D+V+FHPAWH LL R++  GL         +   R   H
Sbjct: 63  GAQADGNPPRLRTHDRYGHRIDEVDFHPAWHRLLDRAVSAGLV--------DAWGRPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q+EAGH    S+T AS+ AL T P +  +W P++ S  Y+   +   QK
Sbjct: 115 VRRAAGFLVWTQVEAGHGCPVSMTHASVPALRTDPVLAAEWEPRLTSTVYEEGLRPASQK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQ---- 248
             V  G+G+TEK+GG+D+   T++ + ++ DG Y L+GHKWF S+PMSD F++ AQ    
Sbjct: 175 RGVLFGMGMTEKQGGSDVRTNTTRAEPLAQDGEYLLTGHKWFCSAPMSDGFLVSAQAAPA 234

Query: 249 -VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             EG + CFLVPR+LEDGS N    QRLK+K+GNRSNA+ E+EF  T+   +G+      
Sbjct: 235 TREGGLTCFLVPRVLEDGSRNVFRIQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVR 294

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M     LD  + S + MR ++A+AIH+   R   GG+LID+P+M+  +AD+AL+  
Sbjct: 295 TITGMVAATRLDCVLGSAALMRQAVAQAIHHTAYRSAFGGLLIDKPLMRNVLADLALESE 354

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT L  RLA ++D      +E A+ R+  P  K+W  K    V+AEA EC+GG+GY+EE
Sbjct: 355 AATTLGMRLAAAYDA--DTEQERAFLRLAVPAAKFWVAKRCTPVVAEASECLGGNGYVEE 412

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVIT 485
             + R  RESP NSI  GSGN   LDVL  L++  +        + +  G+  +    I 
Sbjct: 413 SGMPRLLRESPLNSIWEGSGNVQALDVLRALQREPSALNAFLQEVGRARGADHRLDGAIK 472

Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            L   ++     +  AR L E++AL    + L R    +++D F  +R   +  S    L
Sbjct: 473 GLLTELADLDGIEARARRLVERMALVLQGSLLVRWAPPEVSDAFCASRLGGDGGSVFGTL 532

Query: 546 HGRFNAAHIIDSL 558
               +   I++  
Sbjct: 533 PHTLDLTSIVERA 545


>gi|239945204|ref|ZP_04697141.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991666|ref|ZP_04712330.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 545

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 196/548 (35%), Positives = 291/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D +L   +          V  +EL  LG    S  AQE 
Sbjct: 3   ATTHTVTNQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H
Sbjct: 63  GTQANAHPPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL--------TDAWGRPAGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL T P +  +W P + S  Y    + P +K
Sbjct: 115 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GG+D+ + T++ +     G Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 AGVLFGMGMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M
Sbjct: 235 LSCFLVPRVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++A+A+H++  R V GG LID+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D       E A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 355 AMRLAAAYDA--DTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++           + +  G+  +    I  L   
Sbjct: 413 LLREAPLNSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +G AR L E+ AL    + L R    ++AD F  +R   +  +    L    +
Sbjct: 473 LADLDGVEGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRLGGDWGAAFGTLPHSLD 532

Query: 551 AAHIIDSL 558
            A ++   
Sbjct: 533 LASVVARA 540


>gi|282864765|ref|ZP_06273819.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560190|gb|EFB65738.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 543

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 193/548 (35%), Positives = 289/548 (52%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + ++ D  L   +              ELE LG    S  AQ  
Sbjct: 3   ATTHTVTNQVPPLVGYDVFARDRALTEAVERHLEPSILPEARGELEALGLSAGSAQAQTW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H
Sbjct: 63  GAQANENPPRLRTHDRYGHRLDEVEFHPAWHRLLGHAVSAGL--------TDAWGRPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q+EAGH    S+T A++ AL T P +  +W P + S  Y+   +   +K
Sbjct: 115 VRRAAGFLVWTQVEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHIYEEGLRPARRK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                G+G+TEK+GGTD+ + T++ + +  DG Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 AGALFGMGMTEKQGGTDVRSNTTRAEPLGGDGEYLLTGHKWFCSAPMSDGFLVLAQAPGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LSCFLVPRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++ +AIH++  R   GG+L+D+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVVGSAALMRQAVTQAIHHSAHRSAFGGLLVDKPLMRNVLADLALESEAATTL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RLA ++D      +E A+ RI  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 355 GLRLAAAYDA--DTEQERAFLRIAVPTAKYWVTKRCTAVVGEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L +     +     + +  G+  +    I  L   
Sbjct: 413 LLREAPLNSIWEGSGNVQALDVLRALRREPQALDAFLREVGRARGADHRLDAAIKDLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +  +    L    +
Sbjct: 473 LADLDAVEARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGAAFGTLPHTLD 532

Query: 551 AAHIIDSL 558
            A +++  
Sbjct: 533 LASVVERA 540


>gi|297155151|gb|ADI04863.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 548

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/546 (36%), Positives = 298/546 (54%), Gaps = 11/546 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   LNQ P  IG +     +LL AL  +  S   +E+  LG    S   Q+ ARMA  +
Sbjct: 4   THEVLNQAPPLIGFSTADDPALLEALRRDGGSRGEQEVRELGALAGSAEVQDWARMAEEH 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P LH +   G R D+VE+HPA+H L+  ++  G H + W  +     R  AH +RAA+ 
Sbjct: 64  PPVLHTHDRYGHRVDEVEYHPAYHQLMAAAVASGQHAAAWSET-----RPGAHLVRAAKF 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y  AQ E GH    S+T A++ AL   P +   + P + +R YD   + P+ K  +  G+
Sbjct: 119 YCFAQAEPGHGCPISMTYAAIPALRAEPELAAAYEPLLAARVYDFGLRPPLGKRGLIAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++    +DG Y L+GHKWF S+PMSD F+ LAQ +  + CFLVPR
Sbjct: 179 SMTEKQGGSDVRANTTRALPQADGSYLLTGHKWFTSAPMSDIFLTLAQTDEGLTCFLVPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLKNK+GNRSNA+ E+E+     + +G+       + +M  +  LD 
Sbjct: 239 VLPDGTLNAMRLQRLKNKLGNRSNASSEIEYDGAVAWRVGEPGRGVRTIVEMVNVTRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S +GMR  L +A+H+   R   G  LIDQP+M+  +AD+A++  AAT L+ RLA + 
Sbjct: 299 VIGSAAGMRAGLRQALHHTEHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATAL 358

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  ++  E EAA  R+   ++KYW CK      AEA+EC+GG+GY+E+  + R YRE+P 
Sbjct: 359 DRTQAGDESEAALRRLGLAVSKYWVCKRGATHAAEALECLGGNGYVEDSGMPRLYREAPL 418

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD---SISLC 494
            SI  GSGN   LDVL  L + +   +   + ++   G+  +    +  LRD    ++  
Sbjct: 419 LSIWEGSGNVAALDVLRALGRESGALDAFLAEVDTAAGADARLDAAVARLRDLLPQLADP 478

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           +  + LAR L E++ L    + L R     +AD F  +R   +       L    +   I
Sbjct: 479 QRAQLLARRLAEQMTLVLQGSLLVRYSHPAVADAFCASRLGGDWGHAFGTLPPGVDTGPI 538

Query: 555 IDSLYL 560
           +D   L
Sbjct: 539 LDRARL 544


>gi|134099627|ref|YP_001105288.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005467|ref|ZP_06563440.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912250|emb|CAM02363.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 547

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 196/541 (36%), Positives = 296/541 (54%), Gaps = 8/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  +  +     +LL  L     +   +EL  LG    S   QE AR+A   
Sbjct: 4   THEVTNQVPPLVDHDVAGDPALLEGLRREGAAWAEEELHALGTLAGSARVQEWARLAEQY 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHP WH L+  ++ +GLH + W +      R  AH  RAA++
Sbjct: 64  PPVLRTHDRYGHRVDEVDFHPHWHDLMDVAVTNGLHAAPWRQE-----RPGAHVARAAKM 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+  Q + GHL   S+T A++ AL   P + + + P + +  YD   + P  K  +  G+
Sbjct: 119 YVWGQTDPGHLCPISMTYAAVPALRAAPELAELYEPLLAAPVYDFGLREPAGKRGLIAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+   T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + CFL+PR
Sbjct: 179 SMTEKQGGSDVRVNTTRAVPAGDGTYTLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLLPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       +  M  L  LD 
Sbjct: 239 VLPDGTRNAIRLQRLKDKLGNRSNASSEIEYEDARGWLVGEEGRGVATIIRMVNLTRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S +GMR  + +A+H+A  R   G  L+DQP+M   +AD+A++  AAT    RLA + 
Sbjct: 299 AVASAAGMRQGVVQAVHHATHRRAFGDRLVDQPLMTNVLADLAVEAEAATVAGMRLAGAV 358

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +  + E ++ RI   +TKYW CK APA  AEA+EC+GG+GY+EE  + R YRESP 
Sbjct: 359 DRAAAGDDGEESFRRIGLAVTKYWVCKRAPAHAAEALECLGGNGYVEESGMPRLYRESPL 418

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
            SI  GSGN   LD L  + K     +  F+ +EQ  G+ G+  + I  +R  +   ++ 
Sbjct: 419 ASIWEGSGNVAALDALRAMAKQPESVQAYFTEVEQAAGADGRLDRAIASVRKELGDLEDA 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E +A+    + L+R G   +AD F  +R   +       L    + A I+  
Sbjct: 479 QYRARRVVELMAVVLQGSLLHRHGNPAVADAFCASRLDGDWGVAFGTLPRGVDTAAILRR 538

Query: 558 L 558
            
Sbjct: 539 A 539


>gi|111220250|ref|YP_711044.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147782|emb|CAJ59442.1| acyl-CoA dehydrogenase (flavoprotein) , adaptive response
           (transcription activated by Ada) [Frankia alni ACN14a]
          Length = 580

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 201/544 (36%), Positives = 295/544 (54%), Gaps = 8/544 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           P  +    NQPP  +G +A +  +LL AL+          L  LG    +  A+  A  A
Sbjct: 18  PGRTHEVTNQPPPLVGHDASADPALLTALVREGAGWHTDALRRLGRLAGTEQARRWAEEA 77

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           +   P+L  +   G R D+V+FHP+WHALL  ++ +GL  + W        R  AH  RA
Sbjct: 78  DRFPPELRTHDRYGNRVDEVDFHPSWHALLEVAVREGLTGAPWRDP-----RPGAHVARA 132

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A + +   +E GHL   S+T A + AL   P +   + P + SR YDP  + P  K  + 
Sbjct: 133 ANILVWGTVEQGHLCPVSMTYAVVPALRAAPDLAARYEPLLASRIYDPGLRPPEGKAGLL 192

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GG+D+ A T+     +DG Y L GHKWF S+PM+D F++LAQ  G + CF 
Sbjct: 193 AGMGMTEKQGGSDVRANTTTATPAADGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFW 252

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+G        + +M  +  
Sbjct: 253 VPRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGAEGRGVRVIIEMVAMTR 312

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD+++ S +GMR ++  A H+ R R   G  LID P+M+  +AD+AL+  AAT L  R+A
Sbjct: 313 LDASLGSAAGMRAAVTAAAHHVRHRRAFGTRLIDAPLMRNVLADLALESEAATTLVLRVA 372

Query: 378 NSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D  A+   +E A+ R+   + KYW CK AP V AEA+EC+GG+GY+EE  + R YRE
Sbjct: 373 GAVDRAARGDRDEQAFKRLATAVAKYWVCKRAPGVAAEALECLGGNGYVEESGMPRLYRE 432

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N I  GSGN   LDVL  L++  +  + L   +E   G+  +  +    LR  +   
Sbjct: 433 APLNGIWEGSGNVNALDVLRALDREPDGLDALSRQIEAARGADARLDRAWDRLRAQLPKA 492

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
             D   AR + E++AL    + L R     +AD F  +R   +       L    + A I
Sbjct: 493 AADPFAARRVVERLALVMQGSLLVRHAPPAVADAFCASRLAGDGGLAFGTLPSGVDVAGI 552

Query: 555 IDSL 558
           +D +
Sbjct: 553 LDRI 556


>gi|15607812|ref|NP_215186.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium tuberculosis H37Rv]
 gi|15840075|ref|NP_335112.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31791856|ref|NP_854349.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium bovis AF2122/97]
 gi|121636593|ref|YP_976816.1| putative acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660447|ref|YP_001281970.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra]
 gi|148821877|ref|YP_001286631.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11]
 gi|215410226|ref|ZP_03419034.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 94_M4241A]
 gi|215425912|ref|ZP_03423831.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|215429511|ref|ZP_03427430.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|215444795|ref|ZP_03431547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T85]
 gi|218752323|ref|ZP_03531119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|219556519|ref|ZP_03535595.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|224989065|ref|YP_002643752.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797614|ref|YP_003030615.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435]
 gi|254230997|ref|ZP_04924324.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C]
 gi|254363621|ref|ZP_04979667.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549632|ref|ZP_05140079.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260199681|ref|ZP_05767172.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|260203843|ref|ZP_05771334.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289442071|ref|ZP_06431815.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|289552928|ref|ZP_06442138.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605]
 gi|289568613|ref|ZP_06448840.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|289573278|ref|ZP_06453505.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289749177|ref|ZP_06508555.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|289752720|ref|ZP_06512098.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|289756760|ref|ZP_06516138.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85]
 gi|289760798|ref|ZP_06520176.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|294993022|ref|ZP_06798713.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 210]
 gi|297633170|ref|ZP_06950950.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207]
 gi|297730150|ref|ZP_06959268.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN R506]
 gi|298524164|ref|ZP_07011573.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774782|ref|ZP_07413119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001]
 gi|306781485|ref|ZP_07419822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002]
 gi|306783322|ref|ZP_07421644.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003]
 gi|306787692|ref|ZP_07426014.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004]
 gi|306794458|ref|ZP_07432760.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005]
 gi|306796426|ref|ZP_07434728.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006]
 gi|306802285|ref|ZP_07438953.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008]
 gi|306806495|ref|ZP_07443163.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007]
 gi|306966693|ref|ZP_07479354.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009]
 gi|306970886|ref|ZP_07483547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010]
 gi|307078614|ref|ZP_07487784.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011]
 gi|307083178|ref|ZP_07492291.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012]
 gi|313657477|ref|ZP_07814357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN V2475]
 gi|3261533|emb|CAA17469.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE8 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880223|gb|AAK44926.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31617443|emb|CAD93553.1| PROBABLE ACYL-COA DEHYDROGENASE FADE8 [Mycobacterium bovis
           AF2122/97]
 gi|121492240|emb|CAL70707.1| Probable acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124600056|gb|EAY59066.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C]
 gi|134149135|gb|EBA41180.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504599|gb|ABQ72408.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra]
 gi|148720404|gb|ABR05029.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11]
 gi|224772178|dbj|BAH24984.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319117|gb|ACT23720.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435]
 gi|289414990|gb|EFD12230.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46]
 gi|289437560|gb|EFD20053.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605]
 gi|289537709|gb|EFD42287.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85]
 gi|289542367|gb|EFD46015.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17]
 gi|289689764|gb|EFD57193.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92]
 gi|289693307|gb|EFD60736.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054]
 gi|289708304|gb|EFD72320.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503]
 gi|289712324|gb|EFD76336.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85]
 gi|298493958|gb|EFI29252.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216675|gb|EFO76074.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001]
 gi|308325783|gb|EFP14634.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002]
 gi|308331818|gb|EFP20669.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003]
 gi|308335604|gb|EFP24455.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004]
 gi|308337221|gb|EFP26072.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005]
 gi|308343087|gb|EFP31938.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006]
 gi|308346971|gb|EFP35822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007]
 gi|308350951|gb|EFP39802.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008]
 gi|308355547|gb|EFP44398.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009]
 gi|308359506|gb|EFP48357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010]
 gi|308363410|gb|EFP52261.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011]
 gi|308367048|gb|EFP55899.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012]
 gi|323720896|gb|EGB29962.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CDC1551A]
 gi|326905106|gb|EGE52039.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis W-148]
 gi|328457395|gb|AEB02818.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207]
          Length = 542

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 195/543 (35%), Positives = 285/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  SS  L+ ALI         E+  +G    SC AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL     +   + P + SREYDP  K    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF S+PM D F++LAQ    + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A   +E EA   RI     KYW CK + A  AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  +    
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR + E I LA   + L R G   +A+ FL  R        +  +    + A I+
Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRLGGQWGGAYGTMPAGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|307328113|ref|ZP_07607293.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306886232|gb|EFN17238.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 548

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 199/546 (36%), Positives = 296/546 (54%), Gaps = 11/546 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           S +   LNQ P  +G +     +LL AL  +       E+  LG    S   Q+ ARMA 
Sbjct: 2   SATHEVLNQAPPLVGFSTADDPALLEALRRDGGGWGEPEVRDLGARAGSAEVQDWARMAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            ++P LH +   G R D+VE+HPA+H L+  ++  G H + W  +     R  AH +RAA
Sbjct: 62  EHSPALHTHDRYGHRIDEVEYHPAYHQLMDVAVASGQHAAAWSET-----RPGAHLVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + Y  AQ E GH    S+T A++ AL   P +   + P + +R YD   + P+ K  +  
Sbjct: 117 KFYAFAQAEPGHGCPISMTYAAVPALRAEPELAAVYEPLLAARTYDFGLRPPLAKRGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q      G Y L+GHKWF S+PMSD F+ LAQ E  + CFLV
Sbjct: 177 GMSMTEKQGGSDVRANTTQAVPDGAGGYALTGHKWFTSAPMSDVFLTLAQTEEGLTCFLV 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N L   RLKNK+GNRSNA+ E+E+ +   + +G+       + +M  +  L
Sbjct: 237 PRVLPDGSRNPLRLMRLKNKLGNRSNASAEIEYESAMAWRVGEPGRGVRTIVEMVNVTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S +GMR  L +A+H+A  R   G  LIDQP+M+  +AD+A++  AAT L+ RLA 
Sbjct: 297 DCVIGSAAGMRAGLRQALHHAGHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLAT 356

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A++  E EAA  R+   ++KYW CK      AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 357 ALDRAEAGDEGEAALRRLGLAVSKYWVCKRGSTHAAEALECLGGNGYVEESGMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI-----LRDSIS 492
           P  SI  GSGN   LDVL  L + +   E   + ++   G+  +    +     L   ++
Sbjct: 417 PLLSIWEGSGNIAALDVLRALSRESGALEAFLAEVDAAAGADARLDAAVDRLRGLLPQLA 476

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +  + +AR L E++ LA   + L R     +AD F  +R   +       L    +  
Sbjct: 477 DPERAQLMARRLAEQMTLALQGSLLVRYSHPAVADAFCASRLDGDWGHAFGTLPPGTDTG 536

Query: 553 HIIDSL 558
            I++  
Sbjct: 537 PILERA 542


>gi|269126024|ref|YP_003299394.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310982|gb|ACY97356.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 543

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 193/543 (35%), Positives = 284/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           + +    NQ P     +     +LL  L          E+  LG    +  AQE  R+AN
Sbjct: 2   ATTHEVFNQAPPLEDYDLADDPALLEGLEREGAGWASAEVHELGRLAGTRRAQEWGRLAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P L  +   G R D+VE+HPAWH L+  ++  GLH + W  S     R+ AH  RAA
Sbjct: 62  EYPPVLRTHDRYGHRIDEVEYHPAWHELMTVAVTHGLHAAPWADS-----REGAHVARAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + Y+  +++AGH    S+T + + AL   P +   + P +  R YD   + P+ K ++  
Sbjct: 117 KFYVW-RVDAGHGCPISMTYSVVPALRHNPELAAQYEPLLVQRTYDFGLRPPLTKAALLA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+      DG Y L GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 176 GMSMTEKQGGSDVRANTTTATPQPDGSYRLVGHKWFTSAPMCDIFLVLAQAPGGLTCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +   RLK+K+GNRSNA+ E+E+ +   + +G+       + +M     L
Sbjct: 236 PRVLPDGSLNPMRIMRLKDKLGNRSNASSEIEYEDAVAWRVGEEGRGVRTIIEMVNSTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I + +GMR  +  A H+A  R   G  LIDQP+M+  +AD+A++  AAT L  RLA 
Sbjct: 296 DCLIGAAAGMRQGVTVAAHHAAHRKAFGAYLIDQPLMRNVLADLAVESEAATTLMMRLAG 355

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +  + EAA+ R+   + KYW  K  PA  AEA+EC+GG+GY EE  + R +RES
Sbjct: 356 AADRAIRGDAAEAAFKRLALAVGKYWVTKRWPAHAAEALECLGGNGYAEESGMPRLFRES 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P NSI  GSGN   LD L  + K     E  F+ +EQ  G+       I   +DS++   
Sbjct: 416 PLNSIWEGSGNVAALDALRAMAKQPQCLEAFFAEVEQAAGADRHLDAAIRRAKDSLTDTA 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +   R + E + L   A+ L R G   +AD F  +R   +       L    +   II
Sbjct: 476 TLELRTRRVAELLTLVLQASLLVRYGHPAVADAFCVSRLGGDWGGAFGTLPAGLDLGPII 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|120556487|ref|YP_960838.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326336|gb|ABM20651.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 563

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 195/551 (35%), Positives = 286/551 (51%), Gaps = 13/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQE 72
             H  S +   +NQP      N Y  DS L  A++        ++L   G +       E
Sbjct: 13  DSHYLSATHEVINQPRPLENYNLYEQDSALREAVLREGAGHASEDLSRFGAWAGKADTIE 72

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L  +AN N P    +   G R D+V FHPA+H L+R ++ +GLH S W         K A
Sbjct: 73  LGNLANANKPSFRTHDRYGHRVDEVTFHPAYHELMRVALENGLHSSPWTNP-----GKGA 127

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA+ YL +Q+EA H    ++T A++ ++   P + K WAPKI + EYD  N     
Sbjct: 128 HVARAAKYYLHSQVEAAHCCPVTMTFAAIPSIQNQPDLAKLWAPKILANEYDSRNVPDGD 187

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           KTSV IG+ +TEK+GG+D+ A T+             Y L GHKWF+S+PM DAF++LAQ
Sbjct: 188 KTSVTIGMAMTEKQGGSDVRANTTVAYPTGREGPGQAYELVGHKWFVSAPMCDAFLVLAQ 247

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               + CFL+PR   DGS N    Q+LKNK+GN +NA+ E+E      +++G+       
Sbjct: 248 TTNGLSCFLMPRWRPDGSKNPWQVQQLKNKMGNVANASSEVEIRGALAWMVGEEGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S +GMR ++A+A H+   R   G  L DQP+M+  +AD+ ++  A
Sbjct: 308 IIEMVAMTRFDCMIGSAAGMRQAVAQATHHCHNRSAFGATLSDQPLMQNVLADLIIENEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A + R+A + D  ++   E   AR+  P+ KYW CK  P    EAMECIGGSG +E+ 
Sbjct: 368 ALAYTMRVARAMDN-QNNEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDC 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R +RESP N+I  GSGN   LD L  L+K     +  F    +  G+  +  + +  
Sbjct: 427 IMPRLFRESPVNAIWEGSGNVQCLDTLRALQKEPETLDAFFKETAEARGTDRRFDQYLAQ 486

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           L+   +   + +  AR L +++ALA   + L R G  D+AD F  +R        +  L 
Sbjct: 487 LQHDFADISDFQYRARNLVDRMALAMQGSLLLRFGDKDVADAFCASRLQSGGGMNYGNLP 546

Query: 547 GRFNAAHIIDS 557
              N A II  
Sbjct: 547 SGTNPAAIIKR 557


>gi|271967959|ref|YP_003342155.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270511134|gb|ACZ89412.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 539

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 204/541 (37%), Positives = 291/541 (53%), Gaps = 8/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P   G +  +  +LL  L          EL  LG    S  A E  R+AN +
Sbjct: 2   THDVFNQAPPLTGHDVSADAALLAGLAREDAGWATGELHRLGTLAGSDQAGEWGRLANEH 61

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHPAWH L+  ++ +GLH + W        R  AH  RAA+ 
Sbjct: 62  PPVLRTHDRYGHRIDEVEFHPAWHELMTVAVENGLHATPWS-----SARPGAHMARAAKF 116

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+ +Q+EAGH    S+T AS+ AL  +P +  DW P + SR YD   + P+ K  V  G+
Sbjct: 117 YVWSQVEAGHGCPISMTYASVAALRHSPALAADWEPALASRSYDFGLRPPLGKRGVLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++ + +SDG Y L+GHKWF S+PM D F++LAQ  G + CFL+PR
Sbjct: 177 AMTEKQGGSDVRAGTTRAEPLSDGSYALTGHKWFNSAPMCDVFLVLAQAPGGLSCFLLPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+     +L+G+       + +M  +  LD 
Sbjct: 237 VLPDGTRNAVHLMRLKDKLGNRSNASAEVEYHGAVAWLVGEEGRGVRTILEMVNMTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S +GMR  +  A+H+A  R   G  LIDQP+M+  +AD+AL+  AAT L  RLA + 
Sbjct: 297 VIGSAAGMRYGVTRAVHHAAHRGAFGRKLIDQPLMRNVLADLALESEAATTLMTRLAGAT 356

Query: 381 DEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +    E+A  R    + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRAIAGDRAESALRRTALAVGKYWVCKRGPVHAAEALECLGGNGYVEESQMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           N I  GSGN   LDVL  L +     E  F+ +    G+          LR S+    + 
Sbjct: 417 NGIWEGSGNVAALDVLRALGREPEALEAFFAEVSLAAGADRHLDDAADRLRKSLGDLTDI 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E +AL   A+ L R     +AD F  +R           L  R +   +I+ 
Sbjct: 477 EARARRVAEDMALVLQASLLVRLAPPAVADAFCASRLAGEAGRAFGTLPPRLDLDALIER 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|320007740|gb|ADW02590.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 562

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 195/548 (35%), Positives = 295/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + ++ D  L   +    +        +EL  LG    S  AQE 
Sbjct: 20  ASTHTVTNQVPPLVGYDVFAGDRALTEAVERHLAPGILREAQEELSTLGRAAGSAQAQEW 79

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+V+FHPAWH LL  ++  GL         +   R+  H
Sbjct: 80  GAQANENPPKLRTHDRYGHRVDEVDFHPAWHRLLGHAVTAGL--------TDAWGREGGH 131

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL T P +  +W P + S  Y+   +   QK
Sbjct: 132 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHVYEEGLRPAPQK 191

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GGTD+ + T++ +   +DG Y L+GHKWF S+PMSD F++LAQ    
Sbjct: 192 AGVLFGMGMTEKQGGTDVRSNTTRAEALAADGEYLLTGHKWFCSAPMSDGFLVLAQAADG 251

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 252 LSCFLVPRVLPDGARNPFALQRLKDKLGNRSNASGEVEFDGTWARRVGEEGRGVRTIIEM 311

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++A+AIH++  R   GG+LI++P+M+  +AD+AL+  AAT L
Sbjct: 312 VAATRLDCVVGSAALMRQAVAQAIHHSAHRSAFGGLLIEKPLMRNVLADLALESEAATTL 371

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D      +E A+ RI  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 372 ALRLAAAYDA--DTEQERAFLRIAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPR 429

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++     +     + +  G+  +    I  L   
Sbjct: 430 LLREAPLNSIWEGSGNVQALDVLRALQREPGALDAFLREVGKARGADHRLDAAIKDLLTE 489

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++  +  +  AR L E++AL    + L R    ++AD F  +R   +  S    L    +
Sbjct: 490 LADLEAVEARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGSAFGTLPHSLD 549

Query: 551 AAHIIDSL 558
            A +++  
Sbjct: 550 LATVVERA 557


>gi|312200505|ref|YP_004020566.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311231841|gb|ADP84696.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 591

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 194/551 (35%), Positives = 291/551 (52%), Gaps = 15/551 (2%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELAR 75
           +P+ +    NQPP  +  +  + D +L   +    +  +  +L  LG    S  A     
Sbjct: 41  RPAVTHVVTNQPPPLVDYDV-ADDPVLEEGLRREGAAFYVDDLHRLGWLAGSEQAARWGD 99

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN + P+L  +   G R D+V+FHP+WHAL+  ++ +GL  + W        R  AH  
Sbjct: 100 LANRHVPELRTHDRYGNRIDEVDFHPSWHALMDVAVREGLAGAAW-----GSRRPGAHVA 154

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA L++ + +E GH    S+T A + AL   P +   +   + SR YD     P  K  
Sbjct: 155 RAAGLHVWSTVEQGHTCPVSMTYAVIPALRAEPELAAVYEKLLTSRVYDRALCPPTGKLG 214

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +  G+G+TEK+GG+D+ A T+      DG Y L GHKWF S+PMSD F++LAQ    + C
Sbjct: 215 LIAGMGMTEKQGGSDVRANTTVAVAHPDGGYRLHGHKWFTSAPMSDLFLVLAQAPSGLSC 274

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T G+L+G        + +M  +
Sbjct: 275 FLVPRILPDGSRNTFRIQRLKDKLGNRSNASAEPEFDDTVGWLVGPEGRGVRTIIEMVAM 334

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              DSA+ S +G R +L +A+H+AR R   G +L+D+P+M+  +AD+A++  AAT L  R
Sbjct: 335 TRFDSALGSAAGTRAALVQAMHHARHRSAFGALLVDKPLMRNVLADLAVESEAATTLVLR 394

Query: 376 LANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           LA + D   +  + E A+ R+   + K+W CK  P  +AEA+EC+GG+GY EE  + R Y
Sbjct: 395 LAGAIDRGVRGDAGERAFLRLATALAKFWICKRQPGFVAEALECLGGNGYAEESGMPRLY 454

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI- 491
           RE+P NSI  G+GN   LDVL  L +         + + +  G   +    I  LR  + 
Sbjct: 455 REAPLNSIWEGAGNVNALDVLRALGREPAAVAAFDAEVARSAGGDDRLDAAIAALRADLA 514

Query: 492 ----SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               +   E +  AR L E++AL    A L R     +AD F   R        +  L  
Sbjct: 515 GLPTADPSELEFGARGLVERMALVLQGALLVRHAPPAVADAFCATRLAGGGGRAYGTLPR 574

Query: 548 RFNAAHIIDSL 558
             + A I+  +
Sbjct: 575 GTDVAAILARV 585


>gi|260185554|ref|ZP_05763028.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
 gi|289446231|ref|ZP_06435975.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
 gi|289419189|gb|EFD16390.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A]
          Length = 542

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 194/543 (35%), Positives = 285/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  SS  L+ ALI         E+  +G    SC AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL     +   + P + SREYDP  K    K  +  
Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF S+PM D F++LAQ    + CFL+
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A   +E EA   RI     KYW CK + A  AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  +    
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR + E I LA   + L R G   +A+ FL  +        +  +    + A I+
Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATQLGGQWGGAYGTMPAGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|315506048|ref|YP_004084935.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315412667|gb|ADU10784.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 542

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 195/541 (36%), Positives = 284/541 (52%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   +NQ P  +G +     +L   +           L  LG       A E  R+AN +
Sbjct: 3   THEVVNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEH 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA  
Sbjct: 63  PPVLRTHDRYGHRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  + +AGH    S+T A++ AL  +P +   + P + +REY    + P  K  +  G+
Sbjct: 118 YLW-RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYHFGLRPPQTKRGLLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR
Sbjct: 177 SMTEKQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD 
Sbjct: 237 VLPDGTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR  +  A+H+A  R   G  L DQP+M+  +AD+A++  AAT L  RLA + 
Sbjct: 297 VIGAAAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGAT 356

Query: 381 DE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  A+    E A+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRSARGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L +   +    +          +     +  +RD ++   + 
Sbjct: 417 NSIWEGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADARLDAAVRRVRDELADHTDL 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E++AL    A L R G   +ADVF  +R   +    +  L G  + A IID 
Sbjct: 477 ELRARRVVERLALVLQGALLVRHGHPAVADVFCASRLDGDHGQAYGTLPGGLDLAAIIDR 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|302555001|ref|ZP_07307343.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302472619|gb|EFL35712.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 544

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 197/550 (35%), Positives = 293/550 (53%), Gaps = 18/550 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQ 71
               +    NQ P  +G + +S+D  L A +      V       EL  LG    S   Q
Sbjct: 1   MTGSTHTVSNQVPPLVGYDVFSADRALTAAVERHLDPVLLDEALGELTGLGRASGSAQVQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E   +AN N P+L  +   G R D+VEFHP+WH LL + +  GL  +          R  
Sbjct: 61  EWGALANENPPRLRTHDRYGNRIDEVEFHPSWHRLLGKGVAAGLTAA--------WNRPG 112

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            H  RAA   +  Q+EAG+    S+T A++ AL T P +  +W P++ S+ YD   +   
Sbjct: 113 GHVRRAAAFLVWTQVEAGNGCPLSMTHAAVPALRTDPELAAEWEPRLTSQIYDRELRPAG 172

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           QK     G+G+TEK+GG+D+ A T+  + +++ G Y L+GHKWF S+PMSD F++LAQ  
Sbjct: 173 QKAGALFGMGMTEKQGGSDVRANTTSARPLAEAGTYELTGHKWFCSAPMSDGFLVLAQAP 232

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CFLVPR+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + 
Sbjct: 233 DGLTCFLVPRVLEDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTII 292

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD  + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+A++  AAT
Sbjct: 293 EMVAATRLDCVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLAIESEAAT 352

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L+ RLA ++DE     +E A  RI  P  KYW  K  PAV  EA EC+GG+GY+EE  +
Sbjct: 353 TLALRLAAAYDEG--GEQERALLRIAVPTAKYWVTKRCPAVAVEAAECLGGNGYVEESGL 410

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
            R  RESP NSI  G+GN   LDVL  L++     +     + Q  G+  +    I  L 
Sbjct: 411 PRLVRESPLNSIWEGAGNVQALDVLRALQREPGALDAYLREVGQARGADHRLDGAIKNLL 470

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
             ++  +  +G AR L E++AL    + L R    ++AD F   R   +  +    L   
Sbjct: 471 TELADLEGVEGRARRLAERLALVLQGSLLVRFAPPEVADAFCAARLGGDGGAAFGTLPHT 530

Query: 549 FNAAHIIDSL 558
            + A +++  
Sbjct: 531 LDLASVVERA 540


>gi|302549579|ref|ZP_07301921.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
 gi|302467197|gb|EFL30290.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
          Length = 555

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 207/540 (38%), Positives = 290/540 (53%), Gaps = 7/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P     +A    +LL  L         +EL  LG    S  AQE A +AN +
Sbjct: 16  THDVTNQAPPLAPYDASDDPALLEGLRREGAGWAEEELRRLGRQAGSAQAQEWADLANRH 75

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+VEFHP+WH L+R +I +GL  S W        R  AH  R+A  
Sbjct: 76  EPELRTHDRYGNRVDEVEFHPSWHHLMRTAIAEGLAASPWADD-----RPGAHVARSAGG 130

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    EAGH    S+T A++ AL   P + K + P + SREY+P  + P +K  +  G+
Sbjct: 131 LVWGHTEAGHGCPTSMTYAAVPALRRQPELAKVYEPLLTSREYEPGLRVPSEKRGLLAGM 190

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVP
Sbjct: 191 GMTEKQGGSDVRTNTTTATPTAESGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVP 250

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD
Sbjct: 251 RVLPDGTRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLD 310

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +MS + MR SL EA H+AR R   G  L+DQP M+  +AD+AL+  AAT L+ RLA +
Sbjct: 311 CVMMSAALMRKSLVEAGHHARHRSAFGARLVDQPAMRNVLADLALESEAATTLTLRLAGA 370

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A +  + E+A+ RI   + KYW  K  PA  AEA+EC+GG+GY+E+  + RHYRE+P
Sbjct: 371 ADRAIRGDAGESAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHYREAP 430

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             SI  GSGN   LDVL  L +     E LF+ L    G+  +    + R    L +  +
Sbjct: 431 LLSIWEGSGNVNALDVLRALSREPGTAEALFAELALARGADARLDAAVTRLRNRLPEASQ 490

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR L E+ AL   A+ L R     +AD F   R   +       L    +   I++  
Sbjct: 491 ATARRLVEQTALTLQASLLVRHAPPAVADAFCATRLGGDWGYAFGTLPEAADLDTIVERA 550


>gi|226363576|ref|YP_002781358.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242065|dbj|BAH52413.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 561

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 187/544 (34%), Positives = 286/544 (52%), Gaps = 8/544 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           S +   +NQ P  I  +A     +L AL         +EL  +G    S  AQ    +A 
Sbjct: 2   SATHEVVNQVPPLINFDAADYAPILEALQREGAHDALEELHDVGRLAGSEEAQRWGDLAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P L  +   G R D+VE+ PA+H L+  ++  GLH + W           AH +RAA
Sbjct: 62  AHPPVLRTHDRYGNRIDEVEYDPAYHRLMTTAVEMGLHGAPWADPH-----PHAHLVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +  Q++AGH    S+T A + AL     + + + P + +R YDP    P+ K  +  
Sbjct: 117 KMAVWGQVDAGHGCPISMTYAVVPALRHNRALAEQYEPLLTARVYDPALHPPLTKAGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    +DG Y L+GHKWF S+PMSD F++LAQ  G + CF +
Sbjct: 177 GMSMTEKQGGSDVRAGTTRAVPQADGSYVLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFL 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  L
Sbjct: 237 PRVLPDGTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I + +GMRV  A+A H+A  R   G  L+DQP+M+  +AD+A++  AAT ++  LA 
Sbjct: 297 DCTIGTATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAA 356

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D A +  E A    RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 357 LTDRATAGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  S+  GSGN   LD L  + K     +  F  L+   G+  +    +  L+ S     
Sbjct: 417 PLLSVWEGSGNVAALDTLRAMAKQPETLQVFFDELDASAGADTRLDAAVAHLKSSFGDVD 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR +   +ALA   + L R G   +AD F  +R   +  S    L    + A II
Sbjct: 477 TLAHRARRVVGDMALALQGSLLVRHGHPAVADAFCVSRLGGDWGSVFGTLPTGVDTAAII 536

Query: 556 DSLY 559
           +  +
Sbjct: 537 ERAF 540


>gi|108797948|ref|YP_638145.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867045|ref|YP_936997.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768367|gb|ABG07089.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693134|gb|ABL90207.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 551

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 197/541 (36%), Positives = 280/541 (51%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ PL    N  +S  L  ALI         E+  LG    S  AQ    +A+ N
Sbjct: 13  THVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRN 72

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P LH +   G R D+VE+ PA+H+L+  ++  GLH + W        R  AH +RAA+ 
Sbjct: 73  RPVLHTHDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKT 127

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    E GH+   S+T A + AL   P +   + P + SR YDP  K P  K  +  G+
Sbjct: 128 SVWTP-EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR
Sbjct: 187 SMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPR 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD 
Sbjct: 247 ILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDC 306

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + 
Sbjct: 307 TLGSATSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGAT 366

Query: 381 DEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +  S EA   RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P 
Sbjct: 367 DRAVRGDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPL 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
             I  GSGN   LD L  +       E LF  L Q  G   +    +  LR ++      
Sbjct: 427 MGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSALDDLATV 486

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E I LA   A L R G   +A+ FL  R           L    + A I++ 
Sbjct: 487 QYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDLAPILER 546

Query: 558 L 558
            
Sbjct: 547 A 547


>gi|29828665|ref|NP_823299.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29605769|dbj|BAC69834.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 549

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 198/553 (35%), Positives = 295/553 (53%), Gaps = 23/553 (4%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D  LV  +              EL  LG    S   QE 
Sbjct: 3   ASTHTVTNQAPPLVGYDVFAADRALVEAVERHLDPALLDEARTELSGLGLSAGSAQVQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P+L  +   G R D+VEFHP+WH LL + +  GL  +          R   H
Sbjct: 63  GALANENPPKLRTHDRWGNRIDEVEFHPSWHRLLGKGVSAGLTAA--------WSRPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAG+    S+T A++ AL T P +  +W P++ S  YD   +   QK
Sbjct: 115 VRRAAGFVIWTQAEAGNGCPLSMTHAAVPALRTDPALAAEWEPRLTSMVYDQGMRPAAQK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQ---- 248
                G+G+TEK+GG+D+ A T+  +    DG Y L+GHKWF S+PMSD F++LAQ    
Sbjct: 175 AGALFGMGMTEKQGGSDVRANTTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAASA 234

Query: 249 VEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
            +G  + CFLVPR+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD      
Sbjct: 235 TDGGGLTCFLVPRVLEDGTRNVFRVQRLKDKLGNRSNASSEVEFDGTWARRVGDEGRGVR 294

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S S MR ++A+AIH+   R   GG L+D+P+M+  +AD+AL+  
Sbjct: 295 TIIEMVAATRLDCVLGSASLMRQAVAQAIHHCTYREAFGGKLVDKPLMRNVLADLALESE 354

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT L+ RLA ++D+     +E A+ R+  P+ KYW  K    V AEA+EC+GG+GY+EE
Sbjct: 355 AATTLALRLAAAYDDG--GEQERAFLRLAVPVAKYWVTKRCTPVAAEALECLGGNGYVEE 412

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVIT 485
             +AR  RESP NSI  G+GN   LDVL  L++           + +  G+  +    I 
Sbjct: 413 FGLARLLRESPLNSIWEGAGNVQALDVLRALQREPQALNAYLQEVGRARGADHRLDGAIK 472

Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            L   ++  +  +G AR + E++AL    A L R    ++AD F  +R   +  +    L
Sbjct: 473 GLLTELADLEGIEGRARRVVERLALVLQGALLVRYAPPEVADAFCASRLGGDWGTAFGTL 532

Query: 546 HGRFNAAHIIDSL 558
               + A +++  
Sbjct: 533 PHSLDLATVVERA 545


>gi|326328696|ref|ZP_08195035.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325953506|gb|EGD45507.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 544

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 195/547 (35%), Positives = 286/547 (52%), Gaps = 9/547 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           +H+   +    NQ P  +  N     +L   L     +    E++ LG    S  AQE  
Sbjct: 1   MHEAHSTHVVTNQVPPLVDHNTAGDPALREGLEREGAAWALPEIDELGRLAGSAEAQEWG 60

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R+A    P+LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH 
Sbjct: 61  RLAERVPPRLHTHDRYGHRVDEVEYVPAYHQLMTTAVEHGLHAAPWADD-----RPGAHV 115

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA+ Y    ++AGH    S+T A + AL   P +   + P + +REYD   + P  K 
Sbjct: 116 ARAAKFYTWN-VDAGHGCPISMTYAVVPALRANPELATRFEPLLTNREYDFGLRDPETKR 174

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            +  G+ +TEK+GG+D+ A T+     SDG Y L GHKWF S+PMSD F+ LAQ E  V 
Sbjct: 175 GLIAGMSMTEKQGGSDVRANTTTATAQSDGTYVLRGHKWFTSAPMSDLFLTLAQTEAGVS 234

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L  G  N + + RLK+K+GN+SNA+ E+E+    G+L+G+       + +M  
Sbjct: 235 CFLVPRVLPGGERNAMRFMRLKDKLGNKSNASSEIEYDAATGWLVGEEGRGVRTIVEMVN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD  I S +GMR +L  A H+A  R   G +LIDQP M+  +AD+ ++  AAT    
Sbjct: 295 MTRLDCVIGSSAGMRTALTMAAHHASHRSAFGKLLIDQPAMRNVLADLQVESEAATTAML 354

Query: 375 RLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RLA + D A    E EAA  RI   +TKY+ CK AP ++ EA+EC+GG+GYIE+  +AR 
Sbjct: 355 RLAGANDRAIRGDEGEAALRRIALAVTKYYVCKRAPFMVNEALECLGGNGYIEDFDVARI 414

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE P  SI  GSGN   LD L  L K  +  +   +  E   G+  +    +  L+   
Sbjct: 415 YREMPLLSIWEGSGNVAALDALRALAKEPHTLDAFLAEAELAAGADARYDAALDRLKKEF 474

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +   + +  AR + E++AL    + L R     +AD F  +R   +       L  R + 
Sbjct: 475 TSFDDLELRARRIVEQLALVFQGSQLLRHAPAAVADAFCSSRLGRDWGGAFGTLSPRGDL 534

Query: 552 AHIIDSL 558
             I++  
Sbjct: 535 DAILERA 541


>gi|239983292|ref|ZP_04705816.1| putative oxidoreductase [Streptomyces albus J1074]
 gi|291455120|ref|ZP_06594510.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358069|gb|EFE84971.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 545

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 203/543 (37%), Positives = 289/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           S +    NQ P   G +      LL  +     +    EL   G Y  S  AQ  A  AN
Sbjct: 6   SVTHEVTNQAPPLTGHDVADDPVLLEGVRREGAAWHLPELHRFGRYAGSEEAQHRADQAN 65

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  +   G R D+VEFHPA+HAL+  S+  GL  + W        R  AH  RAA
Sbjct: 66  RHEPELRTHDRYGHRVDEVEFHPAYHALMDASVSAGLAGAAWADE-----RTGAHVARAA 120

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              +   +E GHL   S+T A + AL   P + K + P + SR YDP  + P  K  +  
Sbjct: 121 GFMVATTVEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRTPAGKRGLLA 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+G+TEK+GGTD+ A T+   +  DG + L GHKWF S+PM+D F++LAQ  G + CFLV
Sbjct: 181 GMGMTEKQGGTDVRANTTTATEQGDGTWLLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLV 240

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N    QRLK+K+GNRSNA+ E EF  T  +L+GD       + +M  +  L
Sbjct: 241 PRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDATVAWLVGDEGKGVRTIIEMVTMTRL 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S +G R +L +A H+AR R V G  LIDQP+M+  +AD+AL+  AAT L+ RLA 
Sbjct: 301 DCVLGSAAGTRAALVQAAHHARHRSVFGAKLIDQPLMRNVLADLALESEAATTLALRLAG 360

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A +    E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+
Sbjct: 361 AADRARRDDPGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREA 420

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P N I  GSGN   LD+L  L +     E   + +E   G+  +       L+  ++L +
Sbjct: 421 PLNGIWEGSGNVNALDMLRALAREPESLEAFRAEIEAASGADRRLDTAWRELQSRLTLTE 480

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           + +  AR + E+ AL   A+ L R     +AD F  +R   +       L    +   ++
Sbjct: 481 DAELRARRVIERAALVLQASLLVRHAPTPVADAFCASRLAGDRGLAFGTLGPGTDFDGVL 540

Query: 556 DSL 558
             +
Sbjct: 541 GRI 543


>gi|302527371|ref|ZP_07279713.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436266|gb|EFL08082.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 538

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 200/540 (37%), Positives = 285/540 (52%), Gaps = 9/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   +NQ P     +  +  +L  A+     S V  EL  LG    S   QE +R+ N N
Sbjct: 4   THEVVNQVPPLE-HDVAADPALAEAVGRTEASWVVDELHELGRLAGSEQVQEWSRLVNEN 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHP WH L+  ++  GL  + W        R  AH  RAA+ 
Sbjct: 63  EPVLRTHDRYGHRIDEVEFHPHWHDLMNVAVSHGLQAAPWRDE-----RPGAHAARAAKF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+ +Q EAGH    S+T A++ AL   P +  ++ P + S EYD   + P  K  +  G+
Sbjct: 118 YVWSQSEAGHTCPISMTYAAVPALRANPELAAEYEPLLASTEYDFGLREPGTKRGLIAGM 177

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+  +   DG Y L GHKWF S+PMSD F+ LAQ  G + CFL+PR
Sbjct: 178 SMTEKQGGSDVRANTTSARPAGDGSYRLVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPR 237

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N +  QRLK+K+GNRSNA+ E+E+ +  G+L+G+       + +M     LD 
Sbjct: 238 VLPDGSRNPIRLQRLKDKLGNRSNASSEIEYDDAVGWLVGEEGRGVRTIIEMVNNTRLDC 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S SGMR+    A+H+A  RH  G  L+DQP+M   +AD+ L+  AA A S RLA + 
Sbjct: 298 ALGSSSGMRLGAVRAVHHATHRHAFGKALVDQPLMANVLADLVLEAEAAVAASMRLAAAG 357

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D      E+A     +A +TKYW CK AP   AEA+EC GG+GY+EE  + R YRE+P  
Sbjct: 358 DRPGDEQEQAFRRLGLA-VTKYWVCKRAPMHAAEALECFGGNGYVEESGMPRLYREAPLM 416

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDK 498
           SI  GSGN   LD L  + +        F+ +EQ  G   +    +  L+  +S   + +
Sbjct: 417 SIWEGSGNVAALDALRAMGRQPESVAAFFAEVEQAAGGDARLDDAVDRLKKDLSDVDDLE 476

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR + E +AL    + L R     +AD F   RF  +       L    + + II   
Sbjct: 477 FRARRVVESMALVLQGSLLVRHAPRAVADAFCGTRFGGDWGLAFGTLPAGTDTSAIIARA 536


>gi|126433611|ref|YP_001069302.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233411|gb|ABN96811.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 551

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 197/541 (36%), Positives = 280/541 (51%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ PL    N  +S  L  ALI         E+  LG    S  AQ    +A+ N
Sbjct: 13  THVVTNQVPLLEDHNPAASPVLTEALIREGGEWGLDEVAELGALSGSAQAQRWGELADRN 72

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P LH +   G R D+VE+ PA+H+L+  ++  GLH + W        R  AH +RAA+ 
Sbjct: 73  RPVLHTHDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKT 127

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    E GH+   S+T A + AL   P +   + P + SR YDP  K P  K  +  G+
Sbjct: 128 SVWTP-EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGM 186

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CF +PR
Sbjct: 187 SMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPR 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD 
Sbjct: 247 ILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDC 306

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S + MR  L  AIH+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + 
Sbjct: 307 TLGSATSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGAT 366

Query: 381 DEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +  S EA   RI     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+P 
Sbjct: 367 DRAVRGDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPL 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
             I  GSGN   LD L  +       E LF  L Q  G   +    +  LR ++      
Sbjct: 427 MGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRPALDDLATV 486

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR + E I LA   A L R G   +A+ FL  R           L    + A I++ 
Sbjct: 487 QYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDLAPILER 546

Query: 558 L 558
            
Sbjct: 547 A 547


>gi|254822769|ref|ZP_05227770.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 542

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 190/543 (34%), Positives = 285/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  +S  L+ ALI         E+  +G    S  AQ    +A+
Sbjct: 2   SDTHVVTNQVPPLEDHNPATSAVLIEALIREGGQWGLDEVNEVGALSASREAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 62  RNRPILHTHDRNGHRIDEVEYDPAYHELMRAAITHGMHAAPWADE-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +   +E GH+   S+T A + AL   P + + + P + SREYDP  +    K  +  
Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRYNPELAQVYEPLLTSREYDPELRPATAKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q    +DG Y L GHKWF S+PM D F++LAQ  G + CF++
Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRVLPDGSRNRMFLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A    E EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDKAVRGDETEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  + +  G   +    +  LR  ++  +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDEIAESAGQDPRLGNHVARLRADLASLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                 R + E I LA   + L R G   +A+ FL  R           +    + A I+
Sbjct: 476 TIAYRGRKVAEDICLALQGSLLVRHGHPAVAEAFLTTRLDRRWGGAFGTMPDGLDLAPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|291454927|ref|ZP_06594317.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291357876|gb|EFE84778.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 557

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 199/548 (36%), Positives = 292/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQEL 73
           + +    NQPP  +G + Y++D  L   +              EL  LG    S  AQE 
Sbjct: 16  ASTHTVTNQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEW 75

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N+P LH +   G R D+V FHPAW  LL  ++  GL+ +          R   H
Sbjct: 76  GVLANENSPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA--------WSRPGGH 127

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL   P +   W P + SR YDP  +   +K
Sbjct: 128 LRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEK 187

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ    
Sbjct: 188 AGVLFGMGMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDG 247

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L+DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + DM
Sbjct: 248 LSCFLVPRVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDM 307

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++A+A H+A  R   GG+L D+P+M+  +AD+AL+  AAT L
Sbjct: 308 VAATRLDCVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTL 367

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D+      E A+ RI  P+ KYW  K   AV AEA+EC+GG+GY+EE  + R
Sbjct: 368 ALRLAAAYDDG--SEAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPR 425

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RESP NS+  GSGN   LDVL  + +         S +    G+  +    I  L   
Sbjct: 426 LLRESPLNSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTE 485

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +       L    +
Sbjct: 486 LADLDGIEARARRLVERMALILQGSLLLRFAPPEVADAFCASRLGGDWGHAFGTLPHTLD 545

Query: 551 AAHIIDSL 558
              +++  
Sbjct: 546 LGSVVERA 553


>gi|296168517|ref|ZP_06850333.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896695|gb|EFG76332.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 545

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 191/543 (35%), Positives = 286/543 (52%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQ P     N  +S  L+ ALI        +E+  +G       AQ    +A+
Sbjct: 5   SDTHVVTNQAPPLENYNPATSAVLVEALIREGGEWGLEEVNEVGAIAAGHEAQRWGELAD 64

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+R +I  G+H + W        R  AH +RAA
Sbjct: 65  RNRPVLHTHDRYGHRVDEVEYDPAYHELMRTAIAHGIHAAPWADE-----RPGAHVVRAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +   +E GH    S+T A + AL   P +   + P + SREYDP  +    K  +  
Sbjct: 120 KMSVWN-VEPGHTCPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLATTKRGITA 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+
Sbjct: 179 GMSMTEKQGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 238

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 239 PRILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEQGRGVPTIIEMVNLTRL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  AIH+ + R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 299 DCTLGSATSMRTGLTRAIHHTQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 358

Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D+A +    EA   RI    +KYW CK A    AEA+EC+GG+GY+E+  + R +RE+
Sbjct: 359 ATDKALRGDGREALLRRIGLAASKYWVCKRATPHAAEALECLGGNGYVEDSGMPRLFREA 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF+ + +  G+  +    +  LR  ++   
Sbjct: 419 PLMGIWEGSGNVSALDTLRAMATRPECIEVLFAEVAEGAGADPRLGGHVERLRRDLTDLD 478

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR + E I LA   A L R G   +A+ FL  R        +  +    + A I+
Sbjct: 479 TITQRARKVAEDICLALQGALLVRHGHPAVAEAFLTTRLDGQWGGAYGTMPAGLDLAPIL 538

Query: 556 DSL 558
           +  
Sbjct: 539 ERA 541


>gi|239946073|ref|ZP_04698010.1| putative oxidoreductase [Streptomyces roseosporus NRRL 15998]
 gi|239992544|ref|ZP_04713208.1| putative oxidoreductase [Streptomyces roseosporus NRRL 11379]
 gi|291449522|ref|ZP_06588912.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291352469|gb|EFE79373.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 552

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 205/544 (37%), Positives = 289/544 (53%), Gaps = 8/544 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
            + +    NQ P   G +A     LL  +          EL   G YV S  AQ  A  A
Sbjct: 12  TAVTHEVTNQAPPLTGHDAADDAVLLEGVRREGAEWHIDELHRFGRYVGSEEAQHWADQA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH  RA
Sbjct: 72  NRHEPELRTHDRFGHRIDEVEFHPAYHSLMDASVRAGLAGAAWADE-----RPGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
               L   LE GHL   S+T A + AL  +P + K + P + SR Y+P    P  K  + 
Sbjct: 127 GGFMLATMLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSTPAAKRGLL 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFL
Sbjct: 187 AGMGMTEKQGGTDVRANTTAAVEQADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFL 246

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DGS N    QRLK K+GNRSNA+ E EF +T  +L+GD       + DM  +  
Sbjct: 247 VPRVLPDGSRNTFRIQRLKEKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTR 306

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S +G+R +LA+A H+AR R V G  LIDQP+M+  +AD++L+  AAT L+ RLA
Sbjct: 307 LDCVLGSAAGIRTALAQAAHHARHRSVFGVELIDQPLMRNVLADLSLESEAATTLALRLA 366

Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A      E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R YRE
Sbjct: 367 GAADRAHRGDAGERAFLRLATAIGKYWVCKRQPVAVAEALECLGGNGYDEASGMPRLYRE 426

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N I  GSGN   LD+L  L +     E L + +    G+  +       LR  ++  
Sbjct: 427 APLNGIWEGSGNVNALDMLRALTREPESLEALSAEIGAAAGADARLDAAWRELRAELARP 486

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           ++ +  AR + E+ AL    + L R     +AD F  +R   +       L    + A +
Sbjct: 487 EDAQLRARRVVERAALVLQGSLLVRHAPAAVADAFCASRLAGDQGLAFGTLSAGTDFAGL 546

Query: 555 IDSL 558
           +  L
Sbjct: 547 LGRL 550


>gi|159039885|ref|YP_001539138.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157918720|gb|ABW00148.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 542

 Score =  495 bits (1274), Expect = e-137,   Method: Composition-based stats.
 Identities = 194/541 (35%), Positives = 288/541 (53%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  +  +     +LL  L          EL  LG    +  A E  R+AN +
Sbjct: 3   THEVFNQVPPLVDYDMADDPALLSGLAREGAGWATAELHDLGRLGGATAAIEHGRLANEH 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L ++   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA+ 
Sbjct: 63  PPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWSDD-----RPGAHVARAAKF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y   + +AGH    S+T A++ AL   P +   + P + +  YDP  +  + K  +  G+
Sbjct: 118 YTW-RPDAGHGCPISMTYAAVPALRHAPELAGRYEPLLTATTYDPGLRPALGKQGLLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+  +  +DG Y L GHKWF S+PM D F+ L Q  G + CFLVPR
Sbjct: 177 SMTEKQGGSDVRANTTTARPEADGSYRLVGHKWFTSAPMCDVFLTLGQAPGGLTCFLVPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD 
Sbjct: 237 VLPDGTRNPVRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR  +  A+H+A  R   G  L+DQP+M+  +AD+A++  AAT L  RLA + 
Sbjct: 297 LIGAAAGMRQGVVTAVHHAVHRRAFGRQLVDQPLMRNVLADLAVESEAATVLMLRLAGAT 356

Query: 381 DE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  A+  + EAA+ R+   I KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRSARGDTGEAAFRRLGVAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L + + +     + ++   G+  +    +  LR S++   + 
Sbjct: 417 NSIWEGSGNVAALDVLRALTRDSQVLAAFEAEVDAAAGADPRLDAAVRRLRASLADPADA 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR L E++AL      L R G   +A+ F  +R        +  L    +   IID 
Sbjct: 477 QLRARRLVEQLALVLQGMLLVRGGHPSVAEAFCASRLGGAHGYAYGTLPAGVDLTTIIDR 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|312138716|ref|YP_004006052.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888055|emb|CBH47367.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 545

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 190/541 (35%), Positives = 292/541 (53%), Gaps = 8/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  I  +A     +L AL          E+  +G       AQ L  +A  +
Sbjct: 4   THEVTNQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAH 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VE+ PA+H L+  ++  GLH + W        R QAH IRAA+ 
Sbjct: 64  PPVLRTHDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPWADP-----RPQAHLIRAAKN 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q++AGH    S+T A + AL   P + + + P + ++ YDP  +AP+ K  +  G+
Sbjct: 119 AVWGQVDAGHGCPISMTYAVVPALRHDPELARQYEPLLTAKVYDPELRAPLTKPGLIAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++     DG Y ++GHKWF S+PMSD F++LAQ  G + CFL+PR
Sbjct: 179 SMTEKQGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N +  QRLK+K+GN SNA+ E+E+ +   + +GD       + +M  +  LD 
Sbjct: 239 ILPDGSRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR+ +A+A H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   
Sbjct: 299 TIGTATGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALT 358

Query: 381 DEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +   +A+  R +A  ++KY+ CK  PA  AEA+EC+GG+GY+EE  + R YRE+P 
Sbjct: 359 DHADNGDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPL 418

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
            S+  GSGN   LDVL  + +     E  F  L+   G   +    +  L+ + +     
Sbjct: 419 LSVWEGSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASL 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR +  ++ALA   A L R G   +AD F  +R      +    L    + A IID 
Sbjct: 479 EHRARSVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIIDR 538

Query: 558 L 558
            
Sbjct: 539 A 539


>gi|315446015|ref|YP_004078894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264318|gb|ADU01060.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 544

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 193/543 (35%), Positives = 281/543 (51%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            D+   +NQ P     N  SS  L  ALI         ++  LG    S TA     +A+
Sbjct: 4   PDTHAVINQVPPLENFNPASSPVLAEALIREGGGWGADDVADLGALAGSVTAVRWGELAD 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P L  +   G R D+VEF P++H L+  ++  GLH + W        R  AH +RAA
Sbjct: 64  RNRPMLRTHDRYGHRVDEVEFDPSYHELMNVAVTHGLHAAPWADD-----RVGAHVVRAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +    EAGHL   S+T A + AL   P +   + P + SR YD   + P  K  +  
Sbjct: 119 KTSVWTP-EAGHLCPISMTYAVVPALRHNPDLAAVYEPLLTSRVYDAELRVPTTKPGITA 177

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++ +   DG Y L+GHKWF S+PM D F++LAQ  G + CF +
Sbjct: 178 GMSMTEKQGGSDVRAGTTEARANGDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFL 237

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 238 PRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  L  A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A 
Sbjct: 298 DCTLGSATSMRNGLMRAVHHAQHRKAFGRYLIDQPLMRNVLADLAVEAEAATMLAMRMAG 357

Query: 379 SFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A    E     R +     KYW CK A    AEAMEC+GG+GY+E+  +AR YRE+
Sbjct: 358 ATDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDFGMARLYREA 417

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L +  G   +    +  LR  +S   
Sbjct: 418 PLMGIWEGSGNVSALDALRAMATRPECIEVLFGELAETDGQDPRLDAHVHRLRLELSDID 477

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR + E I+LA   + L R G   +A+VFL +R           L    + A +I
Sbjct: 478 AIEYRARRVAEDISLALQGSLLVRHGHPAVAEVFLASRLGGQWGGAFGTLPVGLDLAPVI 537

Query: 556 DSL 558
           +  
Sbjct: 538 ERA 540


>gi|239983095|ref|ZP_04705619.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 544

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 199/548 (36%), Positives = 292/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQEL 73
           + +    NQPP  +G + Y++D  L   +              EL  LG    S  AQE 
Sbjct: 3   ASTHTVTNQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N+P LH +   G R D+V FHPAW  LL  ++  GL+ +          R   H
Sbjct: 63  GVLANENSPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA--------WSRPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL   P +   W P + SR YDP  +   +K
Sbjct: 115 LRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ    
Sbjct: 175 AGVLFGMGMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L+DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +GD       + DM
Sbjct: 235 LSCFLVPRVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++A+A H+A  R   GG+L D+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++D+      E A+ RI  P+ KYW  K   AV AEA+EC+GG+GY+EE  + R
Sbjct: 355 ALRLAAAYDDG--SEAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RESP NS+  GSGN   LDVL  + +         S +    G+  +    I  L   
Sbjct: 413 LLRESPLNSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +       L    +
Sbjct: 473 LADLDGIEARARRLVERMALILQGSLLLRFAPPEVADAFCASRLGGDWGHAFGTLPHTLD 532

Query: 551 AAHIIDSL 558
              +++  
Sbjct: 533 LGSVVERA 540


>gi|326775818|ref|ZP_08235083.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326656151|gb|EGE40997.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 555

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 191/551 (34%), Positives = 292/551 (52%), Gaps = 18/551 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D  L   +          V  +EL  LG    S   QE 
Sbjct: 3   ATTHTVTNQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P L  +   G R D+V+FHP+WH LL  ++  GL         +   R   H
Sbjct: 63  GARANAHPPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL--------TDAWGRPAGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++  L T P +  +W P + S  Y    + PM+K
Sbjct: 115 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
               +G+G+TEK+GGTD+ + T++ +       Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 AGALLGMGMTEKQGGTDVRSNTTRAEALSGADGYLLTGHKWFCSAPMSDGFLVLAQAAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LSCFLVPRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++++A+H++  R   GG+LID+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++DE     EE A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 355 AMRLAAAYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++     +     + +  G+  +    I  L   
Sbjct: 413 LLREAPLNSIWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++  +  +  AR + E+IAL    + L R    +++D F  +R   +  S    L    +
Sbjct: 473 LADLEGVEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLD 532

Query: 551 AAHIIDSLYLD 561
            A ++     D
Sbjct: 533 LASVVARARPD 543


>gi|169630939|ref|YP_001704588.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169242906|emb|CAM63934.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 544

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 189/543 (34%), Positives = 278/543 (51%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           +D+    NQ P     NA +S  L+ ALI         E+  +G    +   Q    +AN
Sbjct: 2   ADTHVVTNQVPALRDYNAATSPVLMEALIREGGQWGVDEVLEVGALNGTDRMQRAGELAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D++EF PA+H L+R ++  GLH + W        R  AH +RAA
Sbjct: 62  RNRPVLHTHDRWGHRVDEIEFDPAYHELMREAVAHGLHGAPWADE-----RPGAHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +    + GH+   S+T A + AL   P +   + P + SR YDP    P  K  +  
Sbjct: 117 KTGVWT-ADPGHMCPISMTYAVVPALRANPELAAVYEPLLSSRVYDPVLAVPTAKAGLTA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+     +DG Y L GHKWF S+PM D F++LAQ  G + CF +
Sbjct: 176 GMSMTEKQGGSDVRAGTTTATPSADGSYTLVGHKWFTSAPMCDVFLVLAQAPGGLSCFFL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN SNA+ E+E+     +L+G+       + +M  +  L
Sbjct: 236 PRVLPDGSRNRMRLQRLKDKLGNHSNASSEVEYDEATAWLVGEEGKGVKTIIEMVNMTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  + S + MR  +A A+H+A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A 
Sbjct: 296 DCTLGSATSMRTGVALAMHHAQHRKAFGEYLIDQPLMRNVLADLAIEAEAATMVAMRMAG 355

Query: 379 SFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A    E  +  R +    +KYW CK A     EAMEC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDRATRGDETESLLRRIGLAASKYWVCKRATPHAGEAMECLGGNGYVEDSGLPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       E LF  L    G   +  + I  L   +S  +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFKELALAQGQDERLDRHINGLHSQLSDLE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
                AR + E I LA   A L R G   +A  FL  R   +       L    + + I+
Sbjct: 476 SVTYRARKVAEDICLALQGALLVRHGHPAVAQAFLATRLAGDWGGAFGTLPTGLDLSPIL 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|328880608|emb|CCA53847.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 557

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 198/544 (36%), Positives = 292/544 (53%), Gaps = 8/544 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
            + +    NQ P  +G +      LL  +          +L  +G    S   Q  A  A
Sbjct: 14  TAHTHDVTNQAPPLVGHDVAEDPVLLEGVRREGAEWYLDDLHRIGRRTGSEEVQRWADEA 73

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  +   G R D+V+FHPA+H+L+  +I +GL  + W        R   H  RA
Sbjct: 74  NRHEPELRTHDRYGNRVDEVDFHPAYHSLMDVAISEGLAGAPWADD-----RPGVHVARA 128

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A   + +  EAGH    S+T A + AL  +P +   + P + SR YDP  +AP  K  + 
Sbjct: 129 AGFMVWSSAEAGHGCPVSMTYAVVPALRNSPGLAAAYEPLLTSRVYDPGLRAPGAKRGLL 188

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GGTD+ A T+     SDG + L GHKWF S+PM+D F++LAQ  G + CFL
Sbjct: 189 AGMGMTEKQGGTDVRANTTTAVAASDGSWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFL 248

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG+ N    QRLK+K+GNRSNA+ E EF +T G+L+G+       + DM  +  
Sbjct: 249 VPRVLPDGARNTFRIQRLKDKLGNRSNASSEPEFDDTVGWLVGEEGKGVRTIIDMVTMTR 308

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S SG R +LA+A H+AR R V G  L+DQP+M+  +AD+AL+  AAT L+ R+A
Sbjct: 309 LDCVLGSASGTRAALAQAAHHARYRSVFGARLVDQPLMRNVLADLALESEAATTLALRIA 368

Query: 378 NSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A+   + E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE
Sbjct: 369 GATDRAQRGDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYRE 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N I  GSGN   LDVL  L +     E   + +E   G+  +       +   ++  
Sbjct: 429 APLNGIWEGSGNVNALDVLRALVREPESLEAFRAEVEAAGGADARLDTAWREVLGELTRP 488

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           ++ +  AR L E++AL    + L R     +AD F  +R   +       L    +   I
Sbjct: 489 EDAELRARRLVERLALVLQGSLLVRHAPAAVADAFCASRLAGDRGLAFGTLPPDTDLGAI 548

Query: 555 IDSL 558
           ++ L
Sbjct: 549 LERL 552


>gi|145225662|ref|YP_001136340.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145218148|gb|ABP47552.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 552

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 190/552 (34%), Positives = 277/552 (50%), Gaps = 19/552 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+    NQ P  +  N  +S  L  +L+         E+  LG    S  AQ    +A+ 
Sbjct: 3   DTHVVTNQVPPLVDFNPAASPVLAESLVREGGGWGADEVADLGALAGSDRAQRWGDLADR 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  AH +RAA+
Sbjct: 63  HRPVLHTHDRYGHRVDEVEYDPAYHELMSVAVAHGLHAAPWADD-----RAGAHVVRAAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    E GH+   S+T A + AL   P +   + P + SR+YDP  K P  K  +  G
Sbjct: 118 TSVWTP-EPGHMCPISMTYAVVPALRHNPELAAIYEPLLTSRDYDPELKLPTTKAGITAG 176

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252
           + +TEK+GG+D+ A T+Q     DG Y L GHKWF S+PM D F++LAQ  GR       
Sbjct: 177 MSMTEKQGGSDVRAGTTQATPNGDGSYSLRGHKWFTSAPMCDVFLVLAQAAGRGERSDGG 236

Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              + CF +PR+L DG+ N +  QRLK+K+GN +NA+ E+E+     +L+G+       +
Sbjct: 237 SGGLSCFFLPRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVATI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  L  LD  + S + MR  L  A H+A+ R   G  LIDQP+M+  +AD+A++  AA
Sbjct: 297 IEMVNLTRLDCTLGSATSMRNGLMRAAHHAQHRSAFGAYLIDQPLMRNVLADLAVEAEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           T L+ R+A + D A    E     R +     KYW CK A    AEAMEC GG+GY+E+ 
Sbjct: 357 TMLAMRMAGATDHAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECFGGNGYVEDS 416

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R YRE+P   I  GSGN   LD L  +       + LF  L    G   +  + +  
Sbjct: 417 GMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPECVDVLFDELGIATGHDPRLDRHVAG 476

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           LR      +  +  AR + E I+LA   + L R G   +A+ FL +R           L 
Sbjct: 477 LRPQFDDLESIQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRLDGQWGGAFGTLP 536

Query: 547 GRFNAAHIIDSL 558
              + A I+D  
Sbjct: 537 TGLDLAPILDRA 548


>gi|325676593|ref|ZP_08156271.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552771|gb|EGD22455.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 545

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 190/541 (35%), Positives = 291/541 (53%), Gaps = 8/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  I  +A     +L AL          E+  +G       AQ L  +A  +
Sbjct: 4   THEVTNQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAH 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VE+ PA+H L+  ++  GLH + W        R QAH IRAA+ 
Sbjct: 64  PPVLRTHDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPWADP-----RPQAHLIRAAKN 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q++AGH    S+T A + AL   P +   + P + ++ YDP  +AP+ K  +  G+
Sbjct: 119 AVWGQVDAGHGCPISMTYAVVPALRHDPELALQYEPLLTAKVYDPELRAPLTKPGLIAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++     DG Y ++GHKWF S+PMSD F++LAQ  G + CFL+PR
Sbjct: 179 SMTEKQGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N +  QRLK+K+GN SNA+ E+E+ +   + +GD       + +M  +  LD 
Sbjct: 239 ILPDGSRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR+ +A+A H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA   
Sbjct: 299 TIGTATGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALT 358

Query: 381 DEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A +   +A+  R +A  ++KY+ CK  PA  AEA+EC+GG+GY+EE  + R YRE+P 
Sbjct: 359 DHADNGDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPL 418

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
            S+  GSGN   LDVL  + +     E  F  L+   G   +    +  L+ + +     
Sbjct: 419 LSVWEGSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASL 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR +  ++ALA   A L R G   +AD F  +R      +    L    + A IID 
Sbjct: 479 EHRARSVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIIDR 538

Query: 558 L 558
            
Sbjct: 539 A 539


>gi|311696230|gb|ADP99103.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 566

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 188/547 (34%), Positives = 289/547 (52%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +    NQPP     N +  D  L  A +        ++L+  G    +    +L   A
Sbjct: 21  ASTHEVFNQPPALENYNLFEQDIALQEAALREGAGKAAEDLKAFGALAGAAQTIDLGFRA 80

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P  + +   G R D+V+FHPA+H L+R +  +GLH S W         + AH  RA
Sbjct: 81  NANKPVFNTHDRFGHRIDEVDFHPAYHELMRIAFDNGLHSSPWSHP-----GQGAHVARA 135

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ Y+ +Q+EA H    ++T A++ ++   P +  DW  +I +  YDP N    QK+SV 
Sbjct: 136 AKYYMHSQVEAAHCCPVTMTFAAIPSIRKQPELAADWEARILADSYDPRNLPDSQKSSVT 195

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ A +++   I  G     Y L GHKWF+S+PM DAF++LAQ +  +
Sbjct: 196 IGMAMTEKQGGSDVRANSTRAYPIGAGGPGQAYELVGHKWFVSAPMCDAFLVLAQTQSGL 255

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N    QRLKNK+GN +NA+ E E      +++G+       + +M 
Sbjct: 256 SCFLMPRWRPDGTKNPWQVQRLKNKMGNVANASSEAELRGALAWMVGEEGRGVPTIIEMV 315

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S +GMR ++A+A H+ R R   G  LIDQP+M+  +AD+AL+  AA A +
Sbjct: 316 AMTRFDCMIGSSAGMRQAIAQASHHCRHRSAFGARLIDQPLMQNVLADLALESEAALAYT 375

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  + +  E   AR+  P+ KYW CK  P    EAMECIGGSG +E+  + R 
Sbjct: 376 MRIARALDN-QDKEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRL 434

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RESP N+I  GSGN   LD L  L+K     +  F+   +  G+  +  + +  L+   
Sbjct: 435 FRESPVNAIWEGSGNVQCLDTLRALQKEPETLDAFFNEAAEAKGADRRFDQFLAQLQHDF 494

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +   + +  AR L +++ALA   + L R     +AD F  +R   +    +  L    + 
Sbjct: 495 ADISDFQYRARNLVDRMALALQGSLLLRHSDAAVADAFCASRLEASGGMNYGNLPSGTDP 554

Query: 552 AHIIDSL 558
           A II   
Sbjct: 555 AAIIKRA 561


>gi|297190427|ref|ZP_06907825.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720450|gb|EDY64358.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 579

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 202/544 (37%), Positives = 291/544 (53%), Gaps = 8/544 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
            +D+    NQPP  +G +      LL  L         ++L  +G    S      A  A
Sbjct: 32  TADTHLVTNQPPPLVGHDVADDAVLLEGLRREGAGWYTEDLHRIGRLAGSEQVLRWAEEA 91

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P L  +   G R D+V+FHP++HAL+  +I +GL  + W        R  AH  RA
Sbjct: 92  NRCEPVLRTHDRYGNRIDEVDFHPSYHALMDVAISEGLGGAPWADD-----RPGAHVARA 146

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A   + +  E GH    S+T A + AL + PR+   + P + SR YDP  +AP  K  + 
Sbjct: 147 AGFMVWSSAEQGHGCPVSMTYAVVPALRSAPRLAALYEPLLTSRVYDPGMRAPAGKRGLL 206

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GGTD+ A T+   +  DG + L GHKWF S+PM+D F++LAQ  G + CFL
Sbjct: 207 AGMGMTEKQGGTDVRANTTTATEQPDGTWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFL 266

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG  N    QRLK+K+GNRSNA+ E EF +T G L+G        + DM  +  
Sbjct: 267 VPRVLPDGGRNTFRIQRLKDKLGNRSNASSEPEFDDTVGMLVGAEGQGVRTIIDMVTMTR 326

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S SG+R +L +A H+ R R V G  LIDQP+M+  +AD++++  AAT L+ R+A
Sbjct: 327 LDCVLGSASGIRTALTQAAHHVRHRSVFGAKLIDQPLMRNVVADLSIESEAATTLALRVA 386

Query: 378 NSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A+   ++E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE
Sbjct: 387 GAADRAQRGDAQERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYRE 446

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N I  GSGN   LDVL  L +     E   + +E   G+  +       LR ++ L 
Sbjct: 447 APLNGIWEGSGNVNALDVLRALTREPGSLEAYAAEIEAAAGADARLDAAWRELRGALVLT 506

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           ++    AR L E++AL    + L R     +AD F  +R   +       L    + A  
Sbjct: 507 EDAALGARRLVERMALVLQGSLLVRHAPAAVADAFCASRLAGDRGLAFGTLPTGLDLAAA 566

Query: 555 IDSL 558
           ID L
Sbjct: 567 IDRL 570


>gi|182435181|ref|YP_001822900.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463697|dbj|BAG18217.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 555

 Score =  491 bits (1265), Expect = e-136,   Method: Composition-based stats.
 Identities = 190/551 (34%), Positives = 292/551 (52%), Gaps = 18/551 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D  L   +          V  +EL  LG    S   QE 
Sbjct: 3   ATTHTVTNQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN + P L  +   G R D+V+FHP+WH LL  ++  GL         +   R   H
Sbjct: 63  GARANAHPPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL--------TDAWGRPAGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++  L T P +  +W P + S  Y    + PM+K
Sbjct: 115 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
               +G+G+TEK+GGTD+ + T++ +       Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 AGALLGMGMTEKQGGTDVRSNTTRAEALSGADGYLLTGHKWFCSAPMSDGFLVLAQAAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LSCFLVPRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWAHRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR ++++A+H++  R   GG+LID+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA ++DE     EE A+ R+  P  KYW  K   AV+ EA+EC+GG+GY+EE  + R
Sbjct: 355 AMRLAAAYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NS+  GSGN   LDVL  L++     +     + +  G+  +    I  L   
Sbjct: 413 LLREAPLNSLWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++  +  +  AR + E+IAL    + L R    +++D F  +R   +  S    L    +
Sbjct: 473 LADLEGVEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLD 532

Query: 551 AAHIIDSLYLD 561
            A ++     D
Sbjct: 533 LASVVARARPD 543


>gi|330467883|ref|YP_004405626.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810854|gb|AEB45026.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 542

 Score =  491 bits (1265), Expect = e-136,   Method: Composition-based stats.
 Identities = 196/541 (36%), Positives = 284/541 (52%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  I  +     +LL  L          E+  LG    S  A E  R+AN  
Sbjct: 3   THEVSNQVPPLIDHDTADDPALLEGLAREGAGWAVGEVRDLGRLAGSQPAIEHGRLANEY 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA+ 
Sbjct: 63  PPVLRTHDRYGHRIDEVEFHPSWHELMRTAVEHGLHAAPWADE-----RVGAHVARAAKF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y   + +AGH    S+T A++ AL   P +  D  P + +R YD   + P+ K  +  G+
Sbjct: 118 YTW-RPDAGHGCPISMTYAAVPALRHAPDLAADHEPLLTTRAYDFGLRPPLTKRGLLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A  +  +   DG Y L GHKWF S+PM D F+ LAQ  G + CFLVPR
Sbjct: 177 SMTEKQGGSDVRANATTARPQPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +   RLK+K+GNRSNA+ E+E+     + +GD       + DM  L  LD 
Sbjct: 237 VLPDGTRNPMRLMRLKDKLGNRSNASAEVEYEQAAAWRIGDEGRGVRTIIDMVNLTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR  +  A+H+A  R   G  LIDQP+M+  +AD+A++  AAT L  RLA + 
Sbjct: 297 VIGAAAGMRQGVITAVHHATHRRAFGRALIDQPLMRNVLADLAIESEAATILMMRLAGAT 356

Query: 381 DE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  A+  + EAA+ RI   I KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRAARGDATEAAFKRIALAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN   LDVL  L     +     + L+   G+  +    +  ++ +++   + 
Sbjct: 417 NSIWEGSGNVAALDVLRALAGQPEVLAAFRAELDAAAGADPRLDAAVRQVQAALADPADR 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR L E++AL    A L R G   +AD F  +R   +    +  L    +   ++  
Sbjct: 477 EVRARRLVEQLALVLQGALLVRHGHPAVADAFCASRLAADHGHAYGTLPPGVDFPTLLAR 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|295835819|ref|ZP_06822752.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295825722|gb|EFG64429.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 550

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 198/554 (35%), Positives = 290/554 (52%), Gaps = 19/554 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQEL 73
           S +    NQPP  +G + + +D  L   +              EL  LG    S  A+E 
Sbjct: 3   SRTHTVTNQPPPLVGYDVFGADRALSEAVDRHLDPALLPGARTELSELGRAAGSAQAREW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+VEFHPAWH LL  ++  GL  +          R   H
Sbjct: 63  GAQANENPPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGLTSA--------WARPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA      Q EAGH    S+T A++ AL   P +   W P + SR YD   +    K
Sbjct: 115 VRRAAGFLTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAVWEPLLTSRVYDEGLRPAAAK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK---ISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                G+G+TEK+GG+D+ A T++        DG++ L+GHKWF S+PMSD F++L Q  
Sbjct: 175 AGALFGMGMTEKQGGSDVRANTTRAVPLDGDGDGVFALTGHKWFCSAPMSDGFLVLGQAP 234

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CFLVPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + 
Sbjct: 235 GGLSCFLVPRVLADGERNVFAIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTII 294

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD A+ S + MR ++A+AIH+AR R   GG L+D+P+M   +AD+AL+  AAT
Sbjct: 295 EMVAATRLDCALGSAALMRQAVAQAIHHARHREAFGGRLVDKPLMSNVLADLALESEAAT 354

Query: 371 ALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            L+ RLA + D A++  E E A  R+  P+ KYW  K    V+ EA+EC+GG+GY+EE  
Sbjct: 355 TLALRLAAACDAAEAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESG 414

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITIL 487
           + R  RESP NS+  GSGN   LDVL  L++G    +   + L    G+  +    +  L
Sbjct: 415 LPRLLRESPLNSLWEGSGNVQALDVLRALQRGPGALDAFLAELGLARGADHRLDAAVRDL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              ++  +  +  AR L E++AL    + L R    ++AD F  +R   +  +    L  
Sbjct: 475 FQELADLEGVEAGARRLVERMALVLQGSLLVRFAPPEVADAFCASRLGGDWGTAFGTLPR 534

Query: 548 RFNAAHIIDSLYLD 561
                 +++   ++
Sbjct: 535 TAPTRAVVERAGVE 548


>gi|120402280|ref|YP_952109.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955098|gb|ABM12103.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 551

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 191/543 (35%), Positives = 275/543 (50%), Gaps = 9/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            D+    NQ P     N  +S  L  ALI         E+  LG    S  AQ    +A+
Sbjct: 2   HDTHVVTNQVPPLEDFNPAASPVLAEALIREGGQWGADEVAELGALAGSAAAQRWGELAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D+VE+ PA+H L+  ++  GLH + W        R  +H +RAA
Sbjct: 62  RNRPVLHTHDRTGHRIDEVEYDPAYHQLMTVAVGHGLHAAPWADD-----RDGSHVVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           +  +    E GH+   S+T A + AL   P +   + P + SR YDP    P  K  +  
Sbjct: 117 KTSVWTP-EPGHICPISMTYAVVPALRHNPELAAVYEPLLTSRVYDPELAVPSAKPGITA 175

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++     DG Y L GHKWF S+PM D F++LAQ  G + CF +
Sbjct: 176 GMSMTEKQGGSDVRAGTTEATPNGDGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFFL 235

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  L
Sbjct: 236 PRILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR  L  A H+A+ R   G  LIDQP+M+  +AD+A++  AAT L+ R+A 
Sbjct: 296 DCALGSATSMRNGLMRATHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMLAMRMAG 355

Query: 379 SFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A    E     R +     KYW CK A    AEAMEC+GG+GY+E+  + R YRE+
Sbjct: 356 ATDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P   I  GSGN   LD L  +       + LF  L    G   +    +  LR  +   +
Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECIDVLFDELAATDGHDARLDAHVQGLRPQLGDPE 475

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR + E I+LA   + L R G   +A+ FL +R           L    + A II
Sbjct: 476 TIQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRLGGQWGGAFGTLPTGLDLAPII 535

Query: 556 DSL 558
           +  
Sbjct: 536 ERA 538


>gi|90417722|ref|ZP_01225634.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337394|gb|EAS51045.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 559

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 241/544 (44%), Positives = 344/544 (63%), Gaps = 5/544 (0%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
             +    NQ   + G NA+  D LL  L A+FP  V   LE  G +  S  A +LAR+AN
Sbjct: 14  FHTHEVTNQSSDYAGFNAFRGDPLLRLLAADFPDPVLTTLERHGRFCGSFEAHDLARLAN 73

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
             TP+L  +   G R + +++HPA+HAL+RRS+ DGLH SIW    E   R+  H +RA 
Sbjct: 74  IETPRLRRFDEKGRRLELIDYHPAYHALMRRSVADGLHASIWQGPEEEAGRR--HAVRAT 131

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           R Y+ A +E GHL   ++TSAS+ AL   P++   W P I +R+YDP+ KAP+ K  + +
Sbjct: 132 RFYMTAGVECGHLCPLTMTSASVAALAAAPKLRDTWLPVIATRQYDPSVKAPLTKAGITL 191

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+G+TEK+GGTD+ A T++      G Y L+GHKWF+S+PMSD F++LAQ +    CFL+
Sbjct: 192 GMGMTEKQGGTDVRANTTRAVDAGGGHYRLTGHKWFMSAPMSDGFLVLAQTQEGPTCFLM 251

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR  +DGS NGL +QRLK+K+GNRSNA+ E+EF +     +GD       + +M  L  L
Sbjct: 252 PRRRDDGSLNGLHFQRLKDKLGNRSNASSEVEFVDADARRVGDPGKGVKTIIEMVTLTRL 311

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S   MR +LAEA+H+AR R V G  LI+QP M R +AD+ALD+AAAT LSFRLA 
Sbjct: 312 DCALASAGLMRGALAEAVHHARERRVFGKTLIEQPQMVRVLADMALDVAAATVLSFRLAE 371

Query: 379 SFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +FD      +   +AA+AR+M P+TKYW CKMAP +  EAMEC+GG+GY+E+  +AR YR
Sbjct: 372 AFDRRTGEAASEADAAWARVMTPVTKYWVCKMAPGLTYEAMECLGGNGYVEDGRLARAYR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           E+P N+I  GSGN M LD+  +L++    F+ + +T+E D+  +      +LR ++S+  
Sbjct: 432 EAPVNAIWEGSGNVMALDLARILQRDPQAFDTVIATIEADMAETAGGTPGVLRAAMSMAL 491

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            D+G  R L E++ALA ++A++ R G+   AD F E R       T+ ML  R ++  I+
Sbjct: 492 ADEGACRLLAEQLALAGASASMRRLGLGQTADAFTETRLGGVFRHTYGMLDLRHDSQAIV 551

Query: 556 DSLY 559
           + LY
Sbjct: 552 EDLY 555


>gi|88810286|ref|ZP_01125543.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88791916|gb|EAR23026.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 551

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 196/553 (35%), Positives = 286/553 (51%), Gaps = 10/553 (1%)

Query: 12  MNQVHQPSD--SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSC 68
           M+  H  +D  +    NQPP      A+S+D +L   +       V + L  LG    S 
Sbjct: 1   MSSRHPLTDLPTHQVTNQPPPLGDYQAFSTDRVLCEAVSREGAPWVSEYLRALGALTGSE 60

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
              E   +AN   P+L  + P G R D+V +HPA+H L+  +I  G+H   WDR      
Sbjct: 61  QLMEQGFLANRQPPELVTFDPYGRRIDEVRYHPAYHELMGLAIRHGVHSIAWDRQ----- 115

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            +  H   AA LYL+ Q E G     ++T A++ AL     V +DW P+I  REYDP   
Sbjct: 116 GEGGHVAHAAALYLLTQPEQGVCCPITMTHAAVPALRLESAVAQDWEPRIRVREYDPRCL 175

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
              +K  V  G+ +TEK+GG+D+ A T++ Q +    Y L+GHKWF S+PMSDAF+ LAQ
Sbjct: 176 PSSEKAGVTFGMAMTEKQGGSDVRANTTRAQTLRGDQYTLTGHKWFCSAPMSDAFLSLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               + CFLVPR   DG  N    QRLK+K+GNRSNA+ E+E+S+T+   +G+       
Sbjct: 236 TPAGLTCFLVPRWRPDGRRNPFFIQRLKDKLGNRSNASAEIEYSDTWARRVGEEGRGVRT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD+A   V  MR +  +A+H+ R R   G  LI QP+M+  +AD+AL++ A
Sbjct: 296 IIEMVQQTRLDAATAPVGMMRQAFVQALHHVRHRSAFGKPLIHQPLMRNLLADLALELEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             AL  R+A +FD       E    R+   + KYW  K AP  I EAMEC+GG+GY+EE 
Sbjct: 356 GVALLLRIARTFDRGAQDPHERLLGRVGTALAKYWTNKRAPEFIYEAMECLGGNGYVEES 415

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486
            + R YRE+P NSI  GSGN + LDVL  +E+   +     + ++   G   +    I  
Sbjct: 416 ILPRLYREAPVNSIWEGSGNVICLDVLRAIERDPQIVPAFLTEVDSARGGHRRLDAAIER 475

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
            +  +   +  +  AR + E +AL   A+ L R     +AD F E+R        +  L 
Sbjct: 476 FKQELGYREAAELRARRIAELMALTLQASLLVRHAPAAVADAFCESRLGGTGGMLYGTLA 535

Query: 547 GRFNAAHIIDSLY 559
                  I++  +
Sbjct: 536 AGVGVDAILERAW 548


>gi|21219626|ref|NP_625405.1| oxidoreductase [Streptomyces coelicolor A3(2)]
 gi|10803136|emb|CAC13064.1| putative oxidoreductase [Streptomyces coelicolor A3(2)]
          Length = 567

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 200/540 (37%), Positives = 279/540 (51%), Gaps = 7/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP     +A     LL  L           L  LG    S  AQ+   +AN +
Sbjct: 28  THDVTNQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRH 87

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A  
Sbjct: 88  EPVLRTHDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWAD-----GRPGAHVARTAGG 142

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    EAGH    S+T A++ AL   P + + + P + SREY+P  + P  K  +  G+
Sbjct: 143 LVWGHTEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLTSREYEPGLRTPTDKRGLLAGM 202

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+    +     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVP
Sbjct: 203 GMTEKQGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVP 262

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD
Sbjct: 263 RVLPDGTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLD 322

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AATAL+ RLA +
Sbjct: 323 CVMASATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATALTLRLAGA 382

Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A    E EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P
Sbjct: 383 ADRAVRGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAP 442

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             SI  GSGN   LDVL  L +     + LF  L    G+  +      R    L +  +
Sbjct: 443 LLSIWEGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASE 502

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR L E +AL   A+ L R     +AD F   R   +       L    +   I+   
Sbjct: 503 TGARRLVELMALTLQASLLVRHAPPAVADAFCATRLGGDWGHAFGTLPDTADLDGILTRA 562


>gi|158318169|ref|YP_001510677.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158113574|gb|ABW15771.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 572

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 197/564 (34%), Positives = 281/564 (49%), Gaps = 31/564 (5%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP  +G +     +LL AL     +    +L  LG    +  AQ     AN  
Sbjct: 9   THRVTNQPPPLVGHDVAEDPALLEALAREGAAGHADDLHRLGRLAGTAEAQRWGDEANRC 68

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHPAWH LLR ++  GL  + W        R  AH  RAA  
Sbjct: 69  PPVLRTHDRYGNRVDEVDFHPAWHELLRVAVGAGLAGAPWAAD-----RPGAHVARAAGF 123

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+E GHL   S+T A   AL   P +   + P + S  YDP  + P+ K  +  G+
Sbjct: 124 LVWGQVEQGHLCPVSMTYAVTPALRAAPDLAAAYLPGLTSTVYDPGLRPPLSKRGLLAGM 183

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GG+D+ A  +      DG Y L GHKWF S+PM+D F++LAQ  G + C LVPR
Sbjct: 184 GMTEKQGGSDVRANETIAVPAGDGSYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPR 243

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG  N    QRLK+K+GNRSNA+ E EF  T G L+G        + +M  L  LDS
Sbjct: 244 VLPDGGRNPFLIQRLKDKLGNRSNASAEPEFDRTLGHLVGTEGRGVRAIIEMVALTRLDS 303

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ + SGMR +L  A H+ R R   G +LID+P+M+  +AD+A++  AA AL  R+A + 
Sbjct: 304 AVGAASGMRAALVAAAHHTRHRSAFGSLLIDKPLMRNVLADLAVESEAAVALVMRVAGAV 363

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A+   E E A+ R+   + KYW CK  PA++AEA+EC+GG+GY+EE  + R YRE+P 
Sbjct: 364 DRAEHGDEGERAFRRLATGLAKYWVCKRQPAMVAEALECLGGNGYVEESGLPRLYREAPL 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC--- 494
           N I  GSGN   LDV+  L +         + ++   G   +       LR  +      
Sbjct: 424 NGIWEGSGNVNALDVVRALGREPASLAAYGAEVDAAAGGDPRLDTAWRRLRAELDDLLTG 483

Query: 495 --------------------KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                                  + +AR L E++AL    + L R     ++D F   R 
Sbjct: 484 TGGGAAGTSRAAGSGGVGGAPVIELVARRLVERMALVLQGSLLVRHAPAAVSDAFCAARL 543

Query: 535 LDNCHSTHCMLHGRFNAAHIIDSL 558
             +       L    +   I+  +
Sbjct: 544 GGDAGLAFGTLPPGLDLEGILRRI 567


>gi|256789299|ref|ZP_05527730.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289773187|ref|ZP_06532565.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289703386|gb|EFD70815.1| oxidoreductase [Streptomyces lividans TK24]
          Length = 567

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 199/540 (36%), Positives = 278/540 (51%), Gaps = 7/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP     +A     LL  L           L  LG    S  AQ+   +AN +
Sbjct: 28  THDVTNQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRH 87

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VE+HP+WH L+R ++ +GL  + W        R  AH  R A  
Sbjct: 88  EPVLRTHDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWAD-----GRPGAHVARTAGG 142

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +    EAGH    S+T A++ AL   P + + + P + SREY+P  + P  K  +  G+
Sbjct: 143 LVWGHTEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLASREYEPGLRTPTDKRGLLAGM 202

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           G+TEK+GG+D+    +     ++ G+Y L GHKWF S+PM D F++LAQ  G + CFLVP
Sbjct: 203 GMTEKQGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVP 262

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M     LD
Sbjct: 263 RVLPDGTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLD 322

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ RLA +
Sbjct: 323 CVMASATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGA 382

Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D A    E EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RHYRE+P
Sbjct: 383 ADRAVRGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAP 442

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             SI  GSGN   LDVL  L +     + LF  L    G+  +      R    L +  +
Sbjct: 443 LLSIWEGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASE 502

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR L E +AL   A+ L R     +AD F   R   +       L    +   I+   
Sbjct: 503 TGARRLVELMALTLQASLLVRHAPPAVADAFCATRLGGDWGHAFGTLPDTADLDGILTRA 562


>gi|86139246|ref|ZP_01057816.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824090|gb|EAQ44295.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 551

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 190/542 (35%), Positives = 285/542 (52%), Gaps = 10/542 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +   +N PP     + +SSD  L   I          +L   G+        E A  AN 
Sbjct: 12  THEVINTPPHMGDQDLWSSDLPLREAIQREGADWAAPKLADFGKKAGRAEVLEQADQANR 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
            +P++  +   G R ++V FHPA+HAL   ++ +GL    W+       +   H   AA 
Sbjct: 72  YSPEVKPFDRYGMRVNQVSFHPAYHALQELAVANGLSNFAWNNP-----KAGGHVTHAAM 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            Y+M Q+E G L   ++T A++  L  +P + ++W PK+ S EYD  +    +K    +G
Sbjct: 127 NYMMNQIEGGVLCPIAMTYAAIPTLKASPALAQEWLPKLLSTEYDKRDIPLSEKNGAQMG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A +++  +  +G Y L+GHK+F S+PMSDAF+ LA  +  + CFL+P
Sbjct: 187 MFMTEKQGGSDVRANSTRAVRDGEG-YRLTGHKFFCSAPMSDAFLTLAYTDEGLSCFLMP 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG  NGL  QRLK+K+GN+SNA+ E+E + T+G  +G        + +M       
Sbjct: 246 RFTPDGQRNGLFLQRLKDKLGNKSNASSEMELNQTWGLRVGAEGKGVKTIIEMVQGTRFY 305

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S + MR  L +A+H+   R     +LIDQP+M+  +AD+AL+  AATALS RL  +
Sbjct: 306 CAFGSAALMRQGLVQALHHTSHRSAFQKLLIDQPLMQNVLADLALESEAATALSLRLGRA 365

Query: 380 FDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            DE ++  ++ AA ARI   I KYW CK AP    EAMEC GG GY+EE  + R YRE+P
Sbjct: 366 IDEGEAGDKDAAALARIGTAIGKYWICKRAPNHTYEAMECHGGPGYVEESIMPRLYREAP 425

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKE 496
            NSI  GSGN + LDVL  L++         S +E   G +    K +  L+ +++   +
Sbjct: 426 VNSIWEGSGNVICLDVLRALQRDPEAGAAFLSEVETAKGGNALFDKSLDALKQALADPSD 485

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  AR LTE +AL   AA L R     ++D F   R       ++  L    +   II 
Sbjct: 486 FQLRARRLTEHMALIWQAALLVRFAPACVSDAFCATRLGAAWSGSYGTLPNGVDCRAIIQ 545

Query: 557 SL 558
             
Sbjct: 546 RA 547


>gi|294632084|ref|ZP_06710644.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835417|gb|EFF93766.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 544

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 189/548 (34%), Positives = 284/548 (51%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQPP   G + +++D  L   +           V  EL  LG    S   QE 
Sbjct: 3   ASTHTVTNQPPPLSGYDVFTADRALTEAVDRHVGAGLLDEVRGELAGLGRAAGSAQLQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+V+FHPAWH LL + +  GL  +          R   H
Sbjct: 63  GAQANENPPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGLTAA--------WNRPAGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q+EAG+    S+T A++ AL   P +  +W P++ S  YD   +    K
Sbjct: 115 VRRAAAFLVWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSMVYDRELRPAHLK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                G+ +TEK+GG+D+ A T+  + +++ G Y L+GHKWF S+PMSDAF++LAQ    
Sbjct: 175 PGALFGMAMTEKQGGSDVRANTTAARPLAESGAYELTGHKWFCSAPMSDAFLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LTCFLVPRVLPDGARNVFRVQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AAT L
Sbjct: 295 VAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGGRLLDKPLMRNVLADLALESEAATTL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA + D+     +E A  RI  P  KYW  K    +  EA EC+GG+GY+EE  + R
Sbjct: 355 ALRLAAACDDG--GEQERALLRIAVPAAKYWVTKRCAPLAVEASECLGGNGYVEESGLPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RESP NSI  G+GN   LDVL  L +    F+     +    G+  +    I  L   
Sbjct: 413 LVRESPLNSIWEGAGNVQALDVLRALRREPGAFDAYLREVGLARGADHRLDAAIKDLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +  ++   L    +
Sbjct: 473 LADLAGVEARARRLVERLALVLQGSLLVRYAPPEVADAFCASRLGGDRGASFGTLPHTLD 532

Query: 551 AAHIIDSL 558
            A +++  
Sbjct: 533 LASVVERA 540


>gi|297561763|ref|YP_003680737.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846211|gb|ADH68231.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 543

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 187/543 (34%), Positives = 284/543 (52%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
             +    NQ P      A    +L+  L          E+  +G+   S   +     AN
Sbjct: 2   PPTHEVFNQAPPLGDYAAAEDPALVEGLRREGAGWAEAEVREVGDAAGSERVRAWGESAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P L  +   G R D+V++ PA+H L+ +++  G+H + W        R  AH  RAA
Sbjct: 62  AYPPVLRTHDRYGHRVDEVDYQPAYHVLMDQAVEHGMHAAPWAD-----GRPGAHVARAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + +L +Q EAGH    S+T A++ AL  +P + + + P + +  YD   +AP  K  +  
Sbjct: 117 KFFLWSQPEAGHGCPVSMTYAAVPALRHSPELARRYEPLLTAPVYDFGLRAPHTKRGLLA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    ++G + L+GHKWF S+PMSD F+ LAQ    + CFLV
Sbjct: 177 GMSMTEKQGGSDVRANTTRAVPTAEGHHVLTGHKWFTSAPMSDFFLTLAQAPEGLSCFLV 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+LEDG  N L  QRLK+K+GNRSNA+ ELE+      L+G+       + +M     L
Sbjct: 237 PRVLEDGGRNALHIQRLKDKLGNRSNASAELEYDGAVAHLVGEPGRGVPTIIEMVNSTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S +GMR ++  A+H+A  R   GG+L++QP+M+  +AD+AL+  AATAL  RLA 
Sbjct: 297 DCVIGSAAGMRAAVVHALHHAEHRSAFGGVLVEQPLMRNVLADLALESEAATALMTRLAG 356

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D A    E EAA+ R+   + K+W  K  PA  AEA+EC+GG+GY+EE  + R +R+S
Sbjct: 357 AVDRAVRGDETEAAFRRLGVAVGKFWVTKRQPAHAAEALECLGGNGYVEESGMPRLFRDS 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P NS+  GSGN   LDVL  + +     E   + L    G        +  L  ++   +
Sbjct: 417 PLNSVWEGSGNVAALDVLRAMGRSPESLEAFLAELRAAAGVDDHYDAAVKRLEQALGDPE 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           E +  AR + E +AL   A+ L R     +A+ F  +R           L    +   I+
Sbjct: 477 EAQYRARTVVELMALVLQASVLLRHAPTPVAEAFTASRLGGEWGHVFGTLPRGVDTELIL 536

Query: 556 DSL 558
           D  
Sbjct: 537 DRA 539


>gi|297197847|ref|ZP_06915244.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
 gi|297146889|gb|EDY60541.2| oxidoreductase [Streptomyces sviceus ATCC 29083]
          Length = 551

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 202/544 (37%), Positives = 285/544 (52%), Gaps = 7/544 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           + + +    NQPP     +A     LL  L         + L  LG    S  AQE A  
Sbjct: 8   EQAATHAVTNQPPPLAPYDASDDPVLLEGLRREGADWAEEGLRRLGLRAGSAEAQEWADQ 67

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN + P L  +   G R D+V+FHP+WH L+R ++ +GL  + W        R  AH  R
Sbjct: 68  ANRHEPVLRTHDRYGNRVDEVDFHPSWHHLMRTAVAEGLAGTPWAED-----RTGAHVAR 122

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A   +    +AGH    S+T A++ AL   P + K +   +  REY+P  + P +K  +
Sbjct: 123 TAGGLVWGHTDAGHGCPTSMTYAAIPALRKEPELAKVYESLLTGREYEPELRVPTRKRGL 182

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
             G+G+TEK+GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + C
Sbjct: 183 LAGMGMTEKQGGSDVRTNTTTATPTAESGMYTLRGHKWFTSAPMCDVFLVLAQAPGGLSC 242

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVPR+L DGS N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M   
Sbjct: 243 FLVPRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNC 302

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  +MS + MR +L EA H+AR R   G  LIDQP+M+  +AD+AL+  AAT L+ R
Sbjct: 303 TRLDCVMMSATLMRRTLVEAGHHARHRSAFGARLIDQPLMRNVLADLALESEAATTLTLR 362

Query: 376 LANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           LA + D A +  + E A+ RI   + KYW  K  PA  AEA+EC+GG+GY+E+  + RHY
Sbjct: 363 LAGAADRAVRGDAGEQAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHY 422

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE+P  SI  GSGN   LDVL  L +  +  + LF  L    G+  +    + R    L 
Sbjct: 423 REAPLLSIWEGSGNVNALDVLRALRRDPDTAQALFGELALAQGADARLDAAVARLRDQLA 482

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
              +  AR L E +AL   A+ L R     +AD F   R   +       L    + A I
Sbjct: 483 TASEAGARRLVEYMALTLQASLLVRHAPPAVADAFCATRLGGDWGHAFGTLPDAADVAAI 542

Query: 555 IDSL 558
           +   
Sbjct: 543 LGRA 546


>gi|329940263|ref|ZP_08289545.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329301089|gb|EGG44985.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 544

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 190/548 (34%), Positives = 293/548 (53%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +S+D  LV  +    +  H      EL  LG    S   QE 
Sbjct: 3   ASTHTVTNQAPPLVGYDVFSADRALVEAVERHVAPEHLGEVTGELTGLGRSAGSAQVQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN N P L  +   G R D+V+FHP+WH LL + +  GL  +          R   H
Sbjct: 63  GVLANENPPTLRTHDRYGNRLDEVDFHPSWHRLLGKGVSAGLTAA--------WSRPAGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q+EAG+    S+T A++ AL T P +  +W P++ S  YD   +   +K
Sbjct: 115 VRRAAAFVVWTQVEAGNGCPLSMTHAAVPALRTDPVLAAEWEPRLTSVVYDRGLRPAARK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V  G+G+TEK+GG+D+ A T++ +    +G Y L GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 AGVLFGMGMTEKQGGSDVRANTTEARPLAEEGTYALRGHKWFCSAPMSDGFLVLAQAPGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+LEDG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LTCFLVPRVLEDGTRNVFLIQRLKDKLGNRSNASSEVEFDGTWARRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + + + MR ++A+A+H+A  R   G +L+D+ +M+  +AD+AL+  AATAL
Sbjct: 295 VAATRLDCVLGAAALMRQAVAQAVHHASHREAFGSLLVDKALMRNVLADLALESEAATAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RLA ++D+     +E A  R+  P  KYW  K    ++AEA EC+GG+GY+EE  + R
Sbjct: 355 GLRLAAAYDDG--GEQERALLRLAVPAAKYWVTKRCTPLVAEASECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RESP NS+  G+GN   LDVL  L +     +     +    G+  +    +  L   
Sbjct: 413 LLRESPLNSVWEGAGNVQALDVLRALRREPRAIDAFLREVGTTRGADHRLDGAVKNLLTD 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++  +  +G AR + E++AL    + L R    ++AD F  +R   +  +    L    +
Sbjct: 473 LADLEGVEGRARRVVERMALVLQGSLLVRYAPPEVADAFCASRLGGDWGTAFGTLPHTLD 532

Query: 551 AAHIIDSL 558
            A ++D  
Sbjct: 533 LASVVDRA 540


>gi|304311840|ref|YP_003811438.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797573|emb|CBL45793.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 558

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 199/548 (36%), Positives = 283/548 (51%), Gaps = 14/548 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-SVVHKELELLGEYVLSCTAQELARMA 77
           + +   LN        N Y+SD  LV  +  +        L   GE V          +A
Sbjct: 13  ATTHEVLNTSRELENYNVYTSDPSLVEALRAYGVDPTDDGLTRFGELVGESEFIRHGFLA 72

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P  H +   G R D+V++HP++H L+  SI  GLH   W        R  AH  RA
Sbjct: 73  NENKPVFHTHDRFGHRIDQVDYHPSYHVLMDTSIRHGLHSLPWTDQ-----RNNAHVYRA 127

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YLMAQ+EAGH    ++T A    L   P +   W PKI +  YDP N     K  + 
Sbjct: 128 AHSYLMAQMEAGHGCPITMTFACAPTLKKQPDIAAQWLPKITAHHYDPRNIGYQHKQGLT 187

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ + T++   +  G    +Y L GHK+F+S+PM DAF+ LA  +  +
Sbjct: 188 IGMAMTEKQGGSDVRSNTTRAFPVGQGGPGKLYQLVGHKFFMSAPMCDAFLALAYTDKGL 247

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR  EDGS N +  Q+LK+K+GN SNA+ E+EF     +L+GD       + +M 
Sbjct: 248 SCFLMPRWNEDGSKNHVHIQQLKDKMGNVSNASSEVEFRGAKAWLIGDEGRGVANILEMV 307

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   D  + S S MR   A+A+ +   R   G +LI+QP+M+  +AD+A++  AA  L 
Sbjct: 308 ALTRFDCLVGSASSMRQCTAQAVFHCANRAAFGKLLIEQPLMRNVLADLAVESDAALHLW 367

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+AN+ DE +S  ++AA+ RI   I KYW CK +P    EAMECIGGSG +E   + R 
Sbjct: 368 LRVANALDE-QSNPQQAAFLRIATAIGKYWVCKRSPGHAYEAMECIGGSGVMERCIMPRL 426

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITILRDSI 491
           YRE+P N+I  GSGN   LDV+  +EK     E LFS L Q  G       ++  ++  +
Sbjct: 427 YREAPINTIWEGSGNVQCLDVMRAMEKSPECVEALFSELAQSQGHDTQLDALVLSIKRHL 486

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHGRFN 550
           S   E +  AR   E +ALA  A+ L R G +  A+ FL  R         +  +     
Sbjct: 487 SNTDEIEWRARQTVEDMALALQASLLVRHGHSATAEAFLATRLGSQQRGLVYGTIPQGIQ 546

Query: 551 AAHIIDSL 558
              II+  
Sbjct: 547 VDSIIERA 554


>gi|146308779|ref|YP_001189244.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576980|gb|ABP86512.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 549

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 196/545 (35%), Positives = 283/545 (51%), Gaps = 14/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMA 77
           +++    NQ P   G N Y  D  L   +  +  +   + L   G        Q    +A
Sbjct: 7   AETHEVFNQVPSLDGANLYRLDLPLQEWVRRYDGAWAEERLSAYGALAGGALMQ-AGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+R +I  GL    W        R  AH  RA
Sbjct: 66  NENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAIEHGLPSLPWTDP-----RAGAHVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              YL +Q E+      ++T A++ A+   P V + W PKI + EYDP N    QK  V 
Sbjct: 121 GLSYLHSQAESASGCPLTMTFAAVPAIRLQPNVAEQWLPKILASEYDPRNLPMEQKAGVT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++   I  G     Y L GHKWF S+PM DAF+ LA  +  +
Sbjct: 181 IGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYTDKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+   F ++LG+       + +M 
Sbjct: 241 SCFLLPRHRPDGTRNQFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTIIEMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  + S S MR +L +A H+   R V G +L DQP+M+  +AD+AL+  AA AL 
Sbjct: 301 AMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLADQPLMQNVLADLALESEAALALC 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D      E+  +AR++  + KYW CK AP ++ EA EC+GG+GY+EE  + R 
Sbjct: 361 MRMGRALDHLHDEQED-KFARLVTAVGKYWICKRAPEMVYEASECMGGAGYVEETIMPRL 419

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITILRDSIS 492
           YRE+P NSI  GSGN   LDVL  L K   + + LF  L    G +  K  I  L+   S
Sbjct: 420 YREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFDELGDGHGDARLKAHIQRLKTDFS 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
              + +  AR LTE +A+A  A  L  AG + ++D F+ +R  +     +  L    +  
Sbjct: 480 DTADIQYRARQLTEDMAVALQAKLLLEAGNSVVSDAFIASRL-EGRGRVYGTLPRGVDVE 538

Query: 553 HIIDS 557
            ++  
Sbjct: 539 ALVAR 543


>gi|163759340|ref|ZP_02166426.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162283744|gb|EDQ34029.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 530

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 257/527 (48%), Positives = 357/527 (67%), Gaps = 12/527 (2%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           L  + A+ P  +  + E +G+Y  S  AQ+LAR+AN   P+L  +   G R D+V+FHP+
Sbjct: 2   LKDIAADMPRGLRADFETVGKYTSSAEAQDLARIANRAVPELRTHDASGNRIDQVDFHPS 61

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           WHAL+RRS+  GL  S+W+   +   +  AH+ RA R YL A LE GHL   ++T+AS+ 
Sbjct: 62  WHALMRRSVSIGLQGSVWEGRRDE--KGVAHQARAIRFYLTAGLECGHLCPLTMTNASIA 119

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A+M  PR+ K WAP+I SR YD +++  MQKT V IG+G+TEK+GGTD+ A  S+  ++ 
Sbjct: 120 AIMAAPRIEKSWAPQIVSRRYDSSHRPAMQKTGVTIGMGMTEKQGGTDVRANESRAVRVG 179

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----------RVGCFLVPRLLEDGSPNGLCY 272
           +G+Y L GHKWFLS+PMSDAF+MLA+  G           + CFLVPR+LEDG+ NGL  
Sbjct: 180 EGVYRLEGHKWFLSAPMSDAFVMLARTGGAASGDTLSEEGLSCFLVPRILEDGTLNGLRL 239

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           QRLK K+GNRSNA+ E+EFS+T+GFLLG        + DM  L  LD A+ S   MR SL
Sbjct: 240 QRLKEKLGNRSNASSEVEFSDTYGFLLGGEGEGIRTILDMVTLTRLDCALASAGMMRASL 299

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           AEA+H+ R R V G +LIDQP+M R +AD+AL++A ATALS RLA +FD A+    EAA 
Sbjct: 300 AEAVHHCRHRRVFGELLIDQPLMARVLADLALEVAGATALSMRLARAFDNARDNPAEAAI 359

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           AR++ P+ KYW CK+AP+V+ E MEC+GG+GY+E+R+IARHYRE+P N+I  GSGN M L
Sbjct: 360 ARLLTPVVKYWVCKIAPSVLYEIMECMGGNGYVEDRAIARHYREAPVNAIWEGSGNVMAL 419

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           DVL +L +G  L +    ++  DLG++G + + +LR  +++ + D+G  R LTE++ALA+
Sbjct: 420 DVLRVLTRGRELCDVALDSINTDLGAAGPRTVDVLRACMAVAERDEGAGRLLTEQMALAA 479

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           +AA L R G   +A+ F+E R      ST+ ML  RF+A  I+D LY
Sbjct: 480 AAAELTRLGAGHVAEAFVETRLGGAWRSTYGMLDARFDARQIVDLLY 526


>gi|330504987|ref|YP_004381856.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919273|gb|AEB60104.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 549

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 198/545 (36%), Positives = 287/545 (52%), Gaps = 14/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMA 77
           +++    NQ P   G N Y  D  L   +  +  +   + L   G        Q    +A
Sbjct: 7   AETHEVFNQVPSLDGANLYRLDLPLQEWVRRYDGAWADERLSAYGALAGGALMQ-AGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+R ++  GL    W        R  AH  RA
Sbjct: 66  NENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAVEHGLPSLPWTDP-----RAGAHVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              YL +Q EA      ++T A++ A+   P V + W PKI + EYDP N    QKT V 
Sbjct: 121 GLTYLHSQAEAASGCPLTMTFAAVPAIRLQPNVAEQWLPKILATEYDPRNLPMEQKTGVT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++   I  G     Y L GHKWF S+PM DAF+ LA  +  +
Sbjct: 181 IGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYTDKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+   F ++LG+       + +M 
Sbjct: 241 SCFLLPRHRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTIIEMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  + S S MR +L +A H+   R V G +L+DQP+M+  +AD+AL+  AA AL 
Sbjct: 301 AMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLVDQPLMQNVLADLALESEAALALC 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D  +   +E  +AR++  + KYW CK AP +I EA EC+GG+GY+EE  + R 
Sbjct: 361 MRMGRALDH-QHDQQEDKFARLVTAVGKYWICKRAPEMIYEASECMGGAGYVEETILPRL 419

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITILRDSIS 492
           YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +  K  I  L+   +
Sbjct: 420 YREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLKAHIQRLKADFA 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
              + +  AR LTE +A+A  A  L  AG   ++D F+ +R  +     +  L    +A 
Sbjct: 480 DTADIQYRARQLTEDMAVALQAKLLLEAGNATVSDAFIASRL-EGRGRVYGTLPRGVDAE 538

Query: 553 HIIDS 557
            ++  
Sbjct: 539 ALLAR 543


>gi|145596492|ref|YP_001160789.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145305829|gb|ABP56411.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 542

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/541 (36%), Positives = 287/541 (53%), Gaps = 9/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P  +  +     +L   L          EL  LG    +  A E  R+AN  
Sbjct: 3   THEVFNQVPPLVDYDVADDPALRSGLAREGAGWAAAELHDLGRLGGAAAAIEHGRLANEY 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L ++   G R D+VEFHP+WH L+R ++  GLH + W        R  AH  RAA+ 
Sbjct: 63  PPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWADD-----RPGAHVARAAKF 117

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y   + +AGH    S+T A++ AL   P +   + P + +  YDP  +  + K  +  G+
Sbjct: 118 YTW-RPDAGHGCPISMTYAAVPALRHAPELAARYEPLLTATTYDPGLRPALGKHGLLAGM 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T+  Q  +DG Y L GHKWF S+PM D F+ L Q  G + CFLVPR
Sbjct: 177 SMTEKQGGSDVRANTTIAQPEADGSYRLVGHKWFTSAPMCDLFLTLGQAPGGLTCFLVPR 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N L   RLK K+GNRSNA+ E+E+ +   + +GD       + DM  L  LD 
Sbjct: 237 VLPDGTRNPLRLMRLKEKLGNRSNASAEIEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDC 296

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I + +GMR  +  A+H+AR R   G  L+DQP+M+  +AD+A++  AAT L  RLA + 
Sbjct: 297 LIGAAAGMRQEVVTAVHHARHRRAFGRQLVDQPLMRTVLADLAVESEAATVLMLRLAGAT 356

Query: 381 DE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D  A+  +++AA+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  + R +RESP 
Sbjct: 357 DRAARGDADQAAFRRLGVAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPL 416

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           NSI  GSGN  VLDVL  L +   +     + ++   G+  +    +  LR S++   + 
Sbjct: 417 NSIWEGSGNVAVLDVLRALTRQPRVLAAFEAEVDAAAGADARLDAAVRRLRASLADPADA 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
              AR L E++AL    A L R G   +A+ F  +R        +  L    +   IID 
Sbjct: 477 PLRARHLVERLALVLQGALLVRHGHPAVAEAFCASRLGGAHGYAYGTLPAGVDLTAIIDR 536

Query: 558 L 558
            
Sbjct: 537 A 537


>gi|316932058|ref|YP_004107040.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315599772|gb|ADU42307.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 555

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 202/547 (36%), Positives = 297/547 (54%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMA 77
           + +   +NQP      N +S+D  LV  +A   +     ++   G  + +    EL  +A
Sbjct: 12  AVTHEVINQPVELADYNLFSADRPLVEAVAREGAEWAANDIADFGARIGTADYLELGALA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+   +   G R D V FHPA+H L++ SI  GLH S W        RK AH  RA
Sbjct: 72  NRHLPEFDTHDRYGRRTDLVRFHPAYHRLMQTSIEQGLHSSPWTDP-----RKGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           AR YL +Q+EAGH    S+T A++  +   P V K W PKI +R YD  N     K  V 
Sbjct: 127 ARFYLHSQIEAGHGCPISMTFAAVPCISLQPDVAKQWLPKILARSYDARNVPADHKQGVT 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ A T++   +      G Y L GHK+F+S+PM DAF++LAQ  G +
Sbjct: 187 IGMAMTEKQGGSDVRANTTRAILVGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGL 246

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLVPR   DGS N L   RLK K+GN SNA+ E E     G+++G        + +M 
Sbjct: 247 SCFLVPRWKPDGSKNPLQVLRLKKKMGNASNASSETELRGALGWMIGPEGRGVATIIEMV 306

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S + MR +L++AI + R+R   G +LIDQP+M+  +AD+A++  AA  L+
Sbjct: 307 AMTRFDCMIGSSAIMRAALSQAIDHCRQRAAFGRLLIDQPIMQNVLADLAIETEAALGLT 366

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  ++   EA   RI + I KYW CK  P + AEAMECIGGSG +E+  + RH
Sbjct: 367 MRIARALDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRH 425

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSI 491
           +RESP N+I  GSGN   LDVL  + +     E  F+ +EQ  G+  +  + I  L+D +
Sbjct: 426 FRESPVNAIWEGSGNVQCLDVLRAMTRTPETLEAYFAEVEQAKGADVAFDRHIAALKDDM 485

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
               + +  AR L +++A+   A+ L R   +++ + +  +R        +  L    N 
Sbjct: 486 RDASDFEERARDLVDRLAVGLQASVLIRHAPDEVTEAYCASRLAQRGAHHYGALPKGMNF 545

Query: 552 AHIIDSL 558
           A IID  
Sbjct: 546 AAIIDRA 552


>gi|226309495|ref|YP_002769457.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188614|dbj|BAH36718.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 545

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 187/543 (34%), Positives = 289/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           + +    NQ P  I  +A     +L AL     S   +E+  +G    S  AQE   +A 
Sbjct: 2   TPTHEVTNQVPPLIDYDAAEYAPILEALHREEASDAAEEVHRVGVRAGSAQAQEWGDLAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P L  +   G R D+V + PA+H L+  ++  GLH + W           AH +RAA
Sbjct: 62  EHPPVLRTHDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPWVDP-----NPHAHLVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +  Q +AGH    S+T A + AL     +   + P + +R YD   KAP+ K  +  
Sbjct: 117 KMAVWGQTDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +
Sbjct: 177 GMSMTEKQGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFL 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN SNA+ E+E+ +   +++G+       + +M  +  L
Sbjct: 237 PRVLPDGSLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I + +GMRV   +A+H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA 
Sbjct: 297 DCTIGTATGMRVGTLQAVHHANHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAA 356

Query: 379 SFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D A S  +   A  RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 357 LTDRATSGDAHAGALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  S+  GSGN   LD L  + K     +  F  L+Q  G   +  + +  L  +     
Sbjct: 417 PLLSVWEGSGNVAALDTLRAMAKQPETLQVFFDELKQASGVDARFDQTVRDLEAAFGDFD 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           + +  AR +   +ALA  A+ L R G   +AD F  +R  ++  S    L    + A I+
Sbjct: 477 DIEYRARKIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGIDIAPIL 536

Query: 556 DSL 558
           +  
Sbjct: 537 ERA 539


>gi|41410231|ref|NP_963067.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399065|gb|AAS06683.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 532

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 189/533 (35%), Positives = 279/533 (52%), Gaps = 9/533 (1%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           P     N   S  L+ ALI         E+  +G    S  AQ    +A+ N P LH + 
Sbjct: 2   PPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELADRNRPILHTHD 61

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G R D+VE+ PA+H L+R +I  GLH + W        R  AH +RAA+  +   +E 
Sbjct: 62  RNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAAKTSVWT-VEP 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           GH+   S+T A + AL   P + K + P + SREYDP  +    K  +  G+ +TEK+GG
Sbjct: 116 GHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITAGMSMTEKQGG 175

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+ A T+Q     DG Y L+GHKWF S+PM D F++LAQ  G + CFL+PR+L DG+ N
Sbjct: 176 SDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLLPRVLPDGTRN 235

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +  QRLK+K+GN +NA+ E+E+     +L+G+       + +M  L  LD  + S + M
Sbjct: 236 RMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATSM 295

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R  L  AI++A+ R   G  LIDQP+M+  +AD+A++  AAT ++ R+A + D+A +   
Sbjct: 296 RTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDKAVRGDQ 355

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA   RI    +KYW CK +    AEA+EC+GG+GY+E+  + R YRE+P   I  GSG
Sbjct: 356 REALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREAPLMGIWEGSG 415

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLT 505
           N   LD L  +       E LF  L +  G   +    +  LR  ++     +  AR + 
Sbjct: 416 NVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELDTIQYRARKVA 475

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           E I LA   + L R G   +A+ FL  R           +      A I++  
Sbjct: 476 EDICLALQGSLLVRHGHPAVAEAFLTTRLDRRWGGAFGTMPDGLELAPILERA 528


>gi|302537622|ref|ZP_07289964.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446517|gb|EFL18333.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 551

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/555 (35%), Positives = 283/555 (50%), Gaps = 25/555 (4%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL--------ELLGEYVLSCTA 70
           + +    NQ P  +G   Y  D  L   +    +    EL          LG    S  A
Sbjct: 3   ATTHTVSNQAPPLVGYEVYLGDRALTEGVERHLADAAPELRDEVREELTALGRAAGSAQA 62

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q   R AN N P L  +   G R D+VEFHPAWH LL  ++  GL         +   R 
Sbjct: 63  QRWGREANENPPVLRTHDRYGNRIDEVEFHPAWHRLLGHAVGAGL--------TDAWGRP 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             H  RAA  +L +Q EAGH    S+T A++ AL   P +  +W P++ S  Y+   +  
Sbjct: 115 AGHLRRAAGFFLWSQAEAGHGCPVSMTHAAVPALRADPELAAEWEPRLTSHVYEEGLRPA 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            QK  V  G+G+TEK+GG+D+ A T+      + G Y L+GHKWF S+PMSD F++LAQ 
Sbjct: 175 GQKAGVLFGMGMTEKQGGSDVRANTTSAAPLDAAGEYVLTGHKWFCSAPMSDGFLVLAQA 234

Query: 250 EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  + CFLVPR+L DG+ N    QRLK+K+GN+SNA+ E+EFS T+   +G+    
Sbjct: 235 APSGRNSLTCFLVPRVLPDGTRNAFAIQRLKDKLGNKSNASGEIEFSGTWARRVGEEGRG 294

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     LD  I S S MR +L +A+H+A  R   G  LIDQP+M+  +AD+AL+
Sbjct: 295 VRTIIEMVAATRLDCVIGSASLMRQALTQAVHHAEHRSAFGAPLIDQPLMRNVLADLALE 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AAT L+ RLA ++D      +E A+ R+  P  KYW  K    ++AEA+EC+GG+GY+
Sbjct: 355 SEAATVLTLRLAAAYDAG--TDQERAFLRLAVPAAKYWVTKRCTPMVAEALECLGGNGYV 412

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KV 483
           EE  + R  RESP NSI  GSGN   LDVL  L++           +    G+  +    
Sbjct: 413 EESGLPRLLRESPVNSIWEGSGNVQSLDVLRALQREPQALNAFLLEVGLARGADHRLDAA 472

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
           I  L   ++     +  AR + E++AL    + L R    ++AD F  +R   +  +   
Sbjct: 473 IKNLLTELADLDGIEARARRVVERMALVLQGSLLVRWAPPEVADAFCASRLGGDWGAAFG 532

Query: 544 MLHGRFNAAHIIDSL 558
            L    + A ++   
Sbjct: 533 TLPHGLDLAGVVARA 547


>gi|229592776|ref|YP_002874895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364642|emb|CAY52560.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 559

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 202/556 (36%), Positives = 291/556 (52%), Gaps = 14/556 (2%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66
           RR  MN +HQ +++    NQPP   G N Y  D  L      F +   H  ++  G    
Sbjct: 5   RRPVMN-LHQFAETHDVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAHARIDAYGALAG 63

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
                E   +AN N P   ++   G R D VEFHPA+H L+R ++  GL    W      
Sbjct: 64  GP-LMEAGFLANQNKPVFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAHP--- 119

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +  AH  RAA  YL +Q EAG     ++T A + AL   P + K W PKI S +YDP 
Sbjct: 120 --QSGAHVARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTDYDPR 177

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242
           N     K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DA
Sbjct: 178 NVGIAHKAGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDA 237

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+ LAQ +  + CFL+PR     + N    QRLKNK+GN SNA+ E+EF     +++G+ 
Sbjct: 238 FLTLAQTDKGLTCFLLPRHRPGDTRNEFYIQRLKNKLGNCSNASSEVEFRGALAWMIGEE 297

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+
Sbjct: 298 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQASHHCAHRSVGGRVLSEQPLMQNVLADL 357

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AA ALS R+  + D      +EA ++R++  + KYW CK APA+I EA EC+GG+
Sbjct: 358 ALESEAALALSLRMGRALDH-LGDEQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGA 416

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GK 481
           GY+E+  + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G     
Sbjct: 417 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRLLA 476

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           + I  L+ +    ++ +  AR LTE IA+A  A  L  AG+  ++D F+ +R  ++    
Sbjct: 477 RHIEQLKSAFMDTQDMQYRARQLTEDIAVALQAKLLLEAGIAAVSDGFIASRLGESSGRV 536

Query: 542 HCMLHGRFNAAHIIDS 557
           +  L    +   I+  
Sbjct: 537 YGTLPRGVDVDAIVAR 552


>gi|229491237|ref|ZP_04385065.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321975|gb|EEN87768.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 545

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 186/543 (34%), Positives = 289/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           + +    NQ P  I  +A     +L AL     S   + +  +G    S  AQE   +A 
Sbjct: 2   TPTHEVTNQVPPLIDYDAAEYAPILEALHREGASDALEGVHRVGIRAGSAQAQEWGDLAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P L  +   G R D+V + PA+H L+  ++  GLH + W           AH +RAA
Sbjct: 62  EHPPVLRTHDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPWVDP-----NPHAHLVRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++ +  Q +AGH    S+T A + AL     +   + P + +R YD   KAP+ K  +  
Sbjct: 117 KMAVWGQTDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T++    SDG Y L+GHKWF S+PMSD F++LAQ  G + CF +
Sbjct: 177 GMSMTEKQGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFL 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DGS N +  QRLK+K+GN SNA+ E+E+ +   +++G+       + +M  +  L
Sbjct: 237 PRVLPDGSLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I + +GMRV   +A+H+A  R   G  LIDQP+M+  +AD+A++  A+T ++  LA 
Sbjct: 297 DCTIGTATGMRVGTMQAVHHATHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAA 356

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D A +    A A  RI   ++KY+ CK  P   AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 357 LTDHATAGDAHASALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  S+  GSGN   LD L  + K     +  F  L++  G  G   + +  L+ +     
Sbjct: 417 PLLSVWEGSGNVAALDTLRAMAKQPETLQVFFDELKRASGVDGHFDQAVRDLQAAFGDFD 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           + +  AR +   +ALA  A+ L R G   +AD F  +R  ++  S    L    + A I+
Sbjct: 477 DIEYRARKIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGVDVAPIL 536

Query: 556 DSL 558
           +  
Sbjct: 537 ERA 539


>gi|56460648|ref|YP_155929.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56179658|gb|AAV82380.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 559

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 191/547 (34%), Positives = 284/547 (51%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +    NQP      N Y +D  L   +     S  + +L   GE      + E    A
Sbjct: 13  ASTHQVENQPTALENYNLYLADKALRKAVEREGASWAYSDLIAFGELAGKADSIEQGFQA 72

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L  +   G R D ++FHP +H L+  +I  GLH S W        +  AH  RA
Sbjct: 73  NKYQPELRTHDRYGHRIDLIDFHPTYHQLMSTAIEHGLHASPWSEP-----KLGAHVARA 127

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ YL  Q+EA H    ++T AS+ AL   P + K+W PKI +R+YDP N    +K++V 
Sbjct: 128 AKYYLHTQVEASHGCPITMTFASIPALRHQPDLFKEWGPKITARQYDPRNIPHTEKSAVT 187

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+   +++   I        Y L GHKWF+S+PM DAF++LAQ    +
Sbjct: 188 IGMAMTEKQGGSDVRLNSTRAYPIGKEGSGQAYELVGHKWFVSAPMCDAFLVLAQTASGL 247

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLVPR   DGS N +  Q+LK K+GN +NA+ E E     G+++G+       + +M 
Sbjct: 248 SCFLVPRWRPDGSKNPIQIQQLKQKMGNAANASSETELRGALGWMVGEEGKGVRTIIEMV 307

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D  I S SGMR ++ +AIH+A  R   G  L +QP+M+  +AD+A++  AA    
Sbjct: 308 ATTRYDCMIGSSSGMRQAVVQAIHHASHREAFGTKLSEQPLMQNLLADLAIESEAAMTYM 367

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  +    E   +RI  PI KYW CK  P    EAME IGGSG +E   + R 
Sbjct: 368 MRIARAMDN-QDDEHEKLLSRIATPIGKYWICKRTPNHAYEAMEVIGGSGVMENHIMPRL 426

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RESP N+I  GSGN   LDVL  +EK   + +  F+ L++  G+  +  + I  L+   
Sbjct: 427 FRESPVNAIWEGSGNIQCLDVLRAIEKQPEVLDVYFAELQRAQGADKRLDQFIMRLKSEF 486

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +     +  AR +T+ +A+   AA L +    D+AD F  +R   +    +  L    N 
Sbjct: 487 TDRNMLQYRARSITDSMAVGLQAALLVQHAGTDVADAFCASRLAASTGLNYGTLPTGLNC 546

Query: 552 AHIIDSL 558
           A I++  
Sbjct: 547 AAIVERA 553


>gi|239928164|ref|ZP_04685117.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291436494|ref|ZP_06575884.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291339389|gb|EFE66345.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 549

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 194/539 (35%), Positives = 277/539 (51%), Gaps = 18/539 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELAR 75
           +    NQ P  +  + + +D  L   +              EL  LG    S   QE   
Sbjct: 5   THTVTNQAPPLVQYDVFGADRALAEAVGRHLGPEVRDEALAELSGLGRTAGSAQVQEWGV 64

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            A+ + P+L  +   G R D+V+FHPAWH LL + +  GL  +          R   H  
Sbjct: 65  QADEHPPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGLTAA--------WGRPGGHVR 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA   +  Q+EAG     S+T A++ AL T P +  +W P + S  YD T +    K  
Sbjct: 117 RAAAFLMWTQVEAGTCCPLSMTHAAVPALRTDPALATEWEPLLTSVIYDRTLRPAHLKPG 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           V  G+G+TEK+GG+D+ A T+  +    DG Y L+GHKWF S+PMSDAF++LAQ  G + 
Sbjct: 177 VLFGMGMTEKQGGSDVRANTTTARPLAEDGAYELTGHKWFCSAPMSDAFLVLAQAPGGLT 236

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T+   +G+       V  M  
Sbjct: 237 CFLVPRVLADGTRNVFLLQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTVIGMVA 296

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  + S   MR ++A+A+H+   R   GG L+D+P+M+  +AD+AL+  AATAL  
Sbjct: 297 ATRLDCVLGSAGLMRQAVAQAVHHCTYREAFGGKLVDKPLMRNVLADLALESEAATALGL 356

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D+     +E A  RI  P  KYW  K  P V  EA EC+GG+GY+EE  + R  
Sbjct: 357 RLAAAYDDG--GEQERALLRIAVPAAKYWVTKRCPPVAVEAAECLGGNGYVEESGLPRLV 414

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RESP NSI  G+GN   LDVL  L +     +     + Q  G+  +    I  L   ++
Sbjct: 415 RESPLNSIWEGAGNVQALDVLRALRREPAALDAYLREVGQARGADHRLDGAIKDLLTELA 474

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
             +  +G AR L E++AL    + L R     +AD F   R   +  +    L    + 
Sbjct: 475 DLEGVEGRARRLVERLALVLQGSLLVRFAPPQVADAFCAARLGGDGGAAFGTLPHTLDL 533


>gi|86739085|ref|YP_479485.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86565947|gb|ABD09756.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 561

 Score =  481 bits (1239), Expect = e-133,   Method: Composition-based stats.
 Identities = 198/543 (36%), Positives = 291/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           S +    NQPP  +G +A +  +LL AL          +L  LG    S  A   A  AN
Sbjct: 19  SRTHEVTNQPPPLVGHDAAADPALLAALAREGAGWHMDDLHRLGRLAGSEEAARQADEAN 78

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              PQL  +   G R D+V+FHP+WHAL+  ++ +GL  + W        R  AH  RAA
Sbjct: 79  RFPPQLRTHDRYGFRVDEVDFHPSWHALMEVAVREGLAGAPWADP-----RPGAHVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + +   +E GHL   S+T A + AL   P +   + P + SR YDP  + P  K  +  
Sbjct: 134 DILVWGTVEQGHLCPVSMTYAVVPALRAAPELAARYEPLLTSRVYDPGLRPPEGKAGLLA 193

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+G+TEK+GG+D+ A T+      DG Y L GHKWF S+PM+D F++LAQ  G + CF V
Sbjct: 194 GMGMTEKQGGSDVRANTTTATPAGDGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFWV 253

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG  N     RLK+K+GNRSNA+ E EF +T G+L+G+       + +M  +  L
Sbjct: 254 PRVLPDGVRNTFRIARLKDKLGNRSNASGEPEFDDTVGWLVGEEGAGVRAIIEMVAMTRL 313

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           DS++ S +GMR ++  A H+ R R   G  LID P+M+  +AD+AL+  AAT L  R+A 
Sbjct: 314 DSSLGSAAGMRAAVMAAAHHVRHRRAFGRPLIDAPLMRNVLADLALESEAATTLVLRVAG 373

Query: 379 SFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + D  A+   +E A+ R+   + KYW CK +PA+ AEA+EC+GG+GY+EE  + R YRE+
Sbjct: 374 AVDRAARGDRQEQAFGRLAIAVAKYWVCKRSPALAAEALECLGGNGYVEESGMPRLYREA 433

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P N I  GSGN   LDVL  L +    F    + ++   G+  +       LR  +   K
Sbjct: 434 PLNGIWEGSGNVNALDVLRALTREPASFAAFATEIDAARGADRRLDAAWARLRAVLDRSK 493

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           + +  AR + E++A+    + L R   + +AD F   R           L    +  +I+
Sbjct: 494 DAEFAARRIVERLAVVLQGSLLVRYAPSAVADAFCATRVAGEGGLAFGTLPDAADVPNIL 553

Query: 556 DSL 558
             +
Sbjct: 554 GRI 556


>gi|296387501|ref|ZP_06876976.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 549

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 290/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G+N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGVNLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|256380216|ref|YP_003103876.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924519|gb|ACU40030.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 529

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/540 (36%), Positives = 290/540 (53%), Gaps = 21/540 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   LNQ P   G +     +LL AL          EL  LG    S   QEL R+AN +
Sbjct: 5   THEVLNQVPPLTGHDVADDPALLTALRLGGAGWAEAELRELGVLAGSARVQELGRLANEH 64

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+VEFHPAWH L+  +I  GLH + W        R  AH  RAA+ 
Sbjct: 65  PPVLRTHDRWGHRVDEVEFHPAWHELMTTAIGRGLHAAPWRDE-----RPGAHVARAAKF 119

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            + +Q+EAGH    S+T A++ AL  +P +   + P + S EYD   + P  K  +  G+
Sbjct: 120 LVWSQVEAGHGCPVSMTYAAVPALRRSPWLAARFEPLLASPEYDFGLRPPESKRGLVAGM 179

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++  +  D  + L+GHKWF S+PMSD F+ LAQ +  + CFLVPR
Sbjct: 180 SMTEKQGGSDVRANTTRAVRSGDH-HVLTGHKWFTSAPMSDLFLTLAQADEGLSCFLVPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K+GNRSNA+ ELE+    G+L+G+       + +M     LD 
Sbjct: 239 VLPDGTRNAISLQRLKDKLGNRSNASAELEYDGAVGWLVGEPGRGVRTIIEMVNATRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S +GMR  L +A H+A  R   G  L+DQPVM+  +AD+A++  AAT +   LA   
Sbjct: 299 VLGSAAGMRAGLVQAAHHAAHRRAFGAALVDQPVMRAVLADLAVESEAATTVGLWLA--- 355

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                     +  R+   + KYW CK  PA  AEA+EC+GG+GY+EE  + R +RESP  
Sbjct: 356 ---------GSRGRLGLAVAKYWVCKRGPAHAAEALECLGGNGYVEESGMPRLFRESPLM 406

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC--KEDK 498
           S+  GSGN   LDVL +L +  +   +  + L+   G+  +++   +R+  ++    + +
Sbjct: 407 SVWEGSGNVAALDVLRVLAREPDAVVEFTAELDAAAGAD-RRLDAAVRELKAMLVEPDPE 465

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR L E++AL    + L R G   +AD F  +R   +       L    +A  I++  
Sbjct: 466 SRARRLVERMALVLQGSLLVRHGHPAVADAFCASRLAGDWGVAFGTLPAGVDAKAIVERA 525


>gi|326774735|ref|ZP_08234000.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655068|gb|EGE39914.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 552

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 207/546 (37%), Positives = 295/546 (54%), Gaps = 9/546 (1%)

Query: 17  QPSD-SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           +P+D +    NQPP   G +A     LL  +     +    EL   G YV S  AQ  A 
Sbjct: 10  RPTDVTHEVTNQPPPLTGHDAADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWAD 69

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN + P+L  +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH  
Sbjct: 70  QANRHEPELRTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHVA 124

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RA    L   LE GHL   S+T A + AL  +P + K + P + SR Y+P   AP  K  
Sbjct: 125 RAGGFMLATMLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSAPTAKRG 184

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +  G+G+TEK+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + C
Sbjct: 185 LLAGMGMTEKQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSC 244

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FLVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  +
Sbjct: 245 FLVPRVLADGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTM 304

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  + S +G+R +LA+A H+AR R V G  L+DQP+M+  +AD++L+  AAT L+ R
Sbjct: 305 TRLDCVLGSAAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLALR 364

Query: 376 LANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           LA + D A    + E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R Y
Sbjct: 365 LAGAADRAHRGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRLY 424

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RE+P N I  GSGN   LD+L  L +     E   +  E   G+  +       LR  ++
Sbjct: 425 REAPLNGIWEGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRAELA 484

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             ++ +  AR + E+ AL    + L R     +AD F  +R   +       L    +  
Sbjct: 485 RAQDAQLRARRVVERAALVLQGSLLVRHAPTAVADAFCASRLAGDQGLAFGTLPAGTDFG 544

Query: 553 HIIDSL 558
            ++  L
Sbjct: 545 ALLGRL 550


>gi|333023668|ref|ZP_08451732.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332743520|gb|EGJ73961.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 541

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 198/543 (36%), Positives = 283/543 (52%), Gaps = 17/543 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANY 79
            NQPP  +G + + +D  L   +         S    EL  LG    S  AQE    AN 
Sbjct: 2   TNQPPPLVGYDVFGADRALSEAVERHLHPALLSTARTELSELGRAAGSAQAQEWGAQANE 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +   G R D+VEFHPAWH LL  ++  GL  +          R   H  RAA 
Sbjct: 62  NPPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGLTSA--------WARPGGHVRRAAG 113

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                Q EAGH    S+T A++ AL   P +  +W P + SR YD   +    K     G
Sbjct: 114 FLTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFG 173

Query: 200 LGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G+TEK+GG+D+ A T++      DG + L+GHKWF S+PMSD F++L Q  G + CFLV
Sbjct: 174 MGMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFLV 233

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     L
Sbjct: 234 PRVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEMVSATRL 293

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S + MR ++A+AIH+A  R   GG L+ +P+M   +AD+AL+  AAT L+ RLA 
Sbjct: 294 DCALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAA 353

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           ++D A +  E E A  R+  P+ KYW  K    V+ EA+EC+GG+GY+EE  + R  RES
Sbjct: 354 AYDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESGLPRLLRES 413

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P NS+  GSGN   LDVL  L++     +     L    G+  +    +  L   ++  +
Sbjct: 414 PLNSLWEGSGNVQALDVLRALQREPGALDAFLGELGAARGADHRLDAAVKHLFQELADLE 473

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR L E++AL    + L R    ++AD F  +R   +  +    L      A I+
Sbjct: 474 GIEARARRLVERMALVLQGSLLVRFAPPEVADAFCASRLGGDWGAAFGTLPHTAPTAAIV 533

Query: 556 DSL 558
              
Sbjct: 534 ARA 536


>gi|39933666|ref|NP_945942.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647512|emb|CAE26033.1| possible acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 555

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 202/547 (36%), Positives = 300/547 (54%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +   +NQP      N +S+D  LV  +          ++   G  + +    EL  +A
Sbjct: 12  AVTHEVINQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+   +   G R D V FHPA+H L++ SI +GLH S W        RK AH  RA
Sbjct: 72  NRHLPEFDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWTDP-----RKGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           AR YL +Q+EAGH    S+T A++  +   P V K W PK+ +R YD  N    QK  + 
Sbjct: 127 ARFYLHSQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGIT 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ A T++   I  G     Y L GHK+F+S+PM DAF++LAQ  G +
Sbjct: 187 IGMAMTEKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGL 246

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLVPR   DG+ N L   RLK K+GN SNA+ E E    FG+++G        + +M 
Sbjct: 247 SCFLVPRWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMV 306

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S + MR +L++AI + R+R   G +LI+QP+M+  +AD+AL+  AA AL+
Sbjct: 307 AMTRFDCMIGSSAIMRAALSQAIDHCRQRAAFGRLLIEQPIMQNVLADLALETEAALALT 366

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  ++   EA   RI + I KYW CK  P + AEAMECIGGSG +E+  + RH
Sbjct: 367 MRIARALDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRH 425

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSI 491
           +RESP N+I  GSGN   LDVL  + +     +  F+ +EQ  G+  +  + I  L+D +
Sbjct: 426 FRESPVNAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDM 485

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
               + +  AR L +++A+   A+ L R   +++A+ +  +R        +  L    N 
Sbjct: 486 RDPSDFEERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNF 545

Query: 552 AHIIDSL 558
           A IID  
Sbjct: 546 AAIIDRA 552


>gi|15599167|ref|NP_252661.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107103490|ref|ZP_01367408.1| hypothetical protein PaerPA_01004560 [Pseudomonas aeruginosa PACS2]
 gi|9950162|gb|AAG07359.1|AE004815_3 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 549

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 289/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|149378325|ref|ZP_01896032.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357383|gb|EDM45898.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 567

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 189/547 (34%), Positives = 282/547 (51%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMA 77
           + +    NQPP     N +  D  L   +A   +     +L+  G +  +     L   A
Sbjct: 22  AVTHEVFNQPPALEDYNLFEQDKALQEAVAREGAAAATSDLKQFGAFAGAADTIALGFHA 81

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P  + +   G R D+V+FHPA+H L+  ++ +GLH S W           AH  R 
Sbjct: 82  NENKPVFNTHDRFGHRTDQVDFHPAYHQLMSAAMENGLHSSPWANP-----GAGAHVART 136

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ Y+ +Q+EA H    ++T A++ ++   P +   W  KI +  YDP N    +K SV 
Sbjct: 137 AKYYMHSQIEAAHCCPITMTFAAVPSIRKQPELAAVWENKILANSYDPRNLPDSEKQSVT 196

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ A T++   I        Y L GHKWF+S+PM DAF++LAQ    +
Sbjct: 197 IGMAMTEKQGGSDVRANTTRAYAIGAEGPGQAYELIGHKWFVSAPMCDAFLVLAQTRSGL 256

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DGS N    QRLKNK+GN +NA+ E E      +++G+       + +M 
Sbjct: 257 SCFLMPRWRPDGSKNPWQIQRLKNKMGNVANASSEAELRGAMAWMVGEEGRGVPTIIEMV 316

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S +GMR +LA+A H+ R R   GG L +QP+M+  +AD+AL+  AA A +
Sbjct: 317 AMTRFDCMIGSSAGMRQALAQASHHCRHRSAFGGRLSEQPLMQNVLADLALESEAALAYT 376

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A S D       E   AR+  P+ KYW CK  P    EAMECIGGSG +E+  + R 
Sbjct: 377 MRVARSLDNQHLEH-ERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRL 435

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
            RESP N+I  GSGN   LD L  L+K  +  +  F+   +  GS  +  + +  L++  
Sbjct: 436 LRESPVNAIWEGSGNVQCLDTLRALQKEPDTLDAFFNEAAEARGSDARFDRFLAQLQNDF 495

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +   + +  AR L +++AL   ++ L R     +AD F  +R   N    +  L    N 
Sbjct: 496 ADISDFEYRARNLVDRLALLMQSSLLLRHSDPAVADAFCASRLEHNGGLNYGNLPSGTNP 555

Query: 552 AHIIDSL 558
           A II   
Sbjct: 556 AAIIKRA 562


>gi|312963212|ref|ZP_07777696.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311282478|gb|EFQ61075.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 551

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/550 (35%), Positives = 281/550 (51%), Gaps = 13/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G          
Sbjct: 2   NLHQFAETHDVTNQPPSLDGTNLYRIDLPLQDWSRRFGAGWAEPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P  +++   G R D VEFHPA+H L+R ++  GL    W        +   
Sbjct: 61  AGFLANQNKPVFNSHDRYGHRIDWVEFHPAYHELMRTAVEHGLPSLPWAHP-----QSGV 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL +Q EAG     ++T A + AL   P + K W PKI S  YDP N     
Sbjct: 116 HVARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTHYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGAVAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSALMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + D      +EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSMRMGRALDH-LGDEQEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G     + I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRPLARRIEQL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           +      ++ +  AR LTE IA+A  A  L  AG   ++D F+ +R  +     +  L  
Sbjct: 475 KAGFMDTQDIQYRARQLTEDIAVALQAKLLLEAGNAAVSDGFIASRLGEASGRVYGTLPR 534

Query: 548 RFNAAHIIDS 557
                 I+  
Sbjct: 535 GVEVEAIVAR 544


>gi|192289022|ref|YP_001989627.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282771|gb|ACE99151.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 555

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 200/547 (36%), Positives = 301/547 (55%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +   +NQP      N +S+D  LV  +          ++   G  + +    EL  +A
Sbjct: 12  AVTHEVINQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+   +   G R D V FHPA+H L++ SI +GLH S W        RK AH  RA
Sbjct: 72  NRHLPEFDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWTDP-----RKGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           AR YL +Q+EAGH    S+T A++  +   P V K W PK+ +R YD  N    QK  + 
Sbjct: 127 ARFYLHSQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGIT 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ A T++   I  G     Y L GHK+F+S+PM DAF++LAQ  G +
Sbjct: 187 IGMAMTEKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGL 246

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLVPR   DG+ N L   RLK K+GN SNA+ E E    FG+++G        + +M 
Sbjct: 247 SCFLVPRWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMV 306

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S + MR +L++A+ + R+R   G +LI+QP+M+  +AD+A++  AA AL+
Sbjct: 307 AMTRFDCMIGSSAIMRAALSQAMDHCRQRAAFGRLLIEQPIMQNVLADLAIETEAALALT 366

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  ++   EA   RI + I KYW CK  P++ AEAMECIGGSG +E+  + RH
Sbjct: 367 MRIARALDH-RTDEHEAHLIRIGSAIGKYWICKRTPSLTAEAMECIGGSGVMEDGPMPRH 425

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSI 491
           +RESP N+I  GSGN   LDVL  + +     +  F+ +EQ  G+  +  + I  L+D +
Sbjct: 426 FRESPVNAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDM 485

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
               + +  AR L +++A+   A+ L R   +++A+ +  +R        +  L    N 
Sbjct: 486 RDASDFEERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNF 545

Query: 552 AHIIDSL 558
           A IID  
Sbjct: 546 AAIIDRA 552


>gi|311742200|ref|ZP_07716010.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314693|gb|EFQ84600.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 545

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 188/543 (34%), Positives = 288/543 (53%), Gaps = 8/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           + +    NQ P  +  +A        A      +    EL  +G    S  +QEL  +A 
Sbjct: 2   TTTHDVTNQVPPLVDYDAADYAPYTEAFTRVGATGALDELSAIGRDAGSAASQELGDLAE 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P LH +   G R D+V + P++H L+ R+   GLH + W           AH  RAA
Sbjct: 62  RHEPVLHTHDRYGHRIDRVVYDPSYHQLMTRATGYGLHGTPW-----VTGDPHAHLRRAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L +  Q++AGH    S+T A++ AL   P +   + P + +  YDP+  AP  K  +  
Sbjct: 117 GLSVWGQVDAGHQCPISMTYAAVPALRVDPELAARFEPLLATTVYDPSFAAPETKAGLTA 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A T+   + +DG Y L+GHKWF S+PMSD  + LAQ  G + CF+V
Sbjct: 177 GMSMTEKQGGSDVRANTTHATEQADGTYRLTGHKWFTSAPMSDILLTLAQAPGGLTCFVV 236

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG+ N +  QRLK+K+GNRSNA+ E+E+   FG+ LGD       + +M  +  L
Sbjct: 237 PRVLPDGTTNRVALQRLKDKLGNRSNASSEVEYDQAFGWRLGDEGRGVRTIIEMVNMTRL 296

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S SGMRV +  A+H+A  R   G  L+DQP+M+  +AD+A++  A++ ++  LA+
Sbjct: 297 DCTIGSASGMRVGVQAAVHHATHRSAFGAALVDQPLMRNVLADLAVEAEASSTVAMWLAD 356

Query: 379 SFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D A +  E AA  R ++  ++KY+ CK  P   AEA+EC+GG+GYIE+  + R YRE+
Sbjct: 357 LTDRALAGDERAADLRRISLAVSKYYVCKRGPVHAAEALECLGGNGYIEDSRMPRLYREA 416

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P  S+  GSGN   LD L  + K       LF  L+   G+  +       L+D  +   
Sbjct: 417 PLMSVWEGSGNVAALDTLRAVAKQPATLTALFDELDSVAGAEPRLDAFARRLKDQFTDPA 476

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR +   +A+A  A+ L R G   ++D F  +R   +  +    L    + A II
Sbjct: 477 SAELRARRIVGDLAIALQASLLVRFGHPAVSDAFAASRLDRDWGTVFGTLPAGLDLAPII 536

Query: 556 DSL 558
           +  
Sbjct: 537 ERA 539


>gi|157147847|ref|YP_001455166.1| isovaleryl CoA dehydrogenase [Citrobacter koseri ATCC BAA-895]
 gi|157085052|gb|ABV14730.1| hypothetical protein CKO_03651 [Citrobacter koseri ATCC BAA-895]
          Length = 550

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 191/521 (36%), Positives = 284/521 (54%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQ 71
           N +H    +    NQP      N + SD  L   +A   +    +L   +G+ + +  + 
Sbjct: 9   NTMHWQ--THTVFNQPAPLNNSNLFLSDGALCEAVAREGAGWDSDLLASIGQQLGTAESL 66

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN   P+L  Y P G+R D V FHPAWH L++    + +H   W+ +     R+ 
Sbjct: 67  ELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEN----ARQG 122

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD      
Sbjct: 123 AFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPSPFHDWLTPLRSDRYDSHLLPG 182

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG + L GHKWF S P SDA ++LAQ +
Sbjct: 183 GQKRGLLIGMGMTEKQGGSDVLSNTTRAERLDDGAWRLVGHKWFFSVPQSDAHLVLAQTK 242

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  NG+  +RLK+K+GNRSNA+ E+EF +  G+LLG+       + 
Sbjct: 243 GGLSCFFVPRFLPDGQRNGVRLERLKDKLGNRSNASCEVEFQDAVGWLLGEEGEGIRHIL 302

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S S MR + + AI++A +R V G  LIDQP+M++ ++ +AL +   T
Sbjct: 303 KMGGMTRFDCALGSHSMMRRAFSVAIYHAHQRQVFGKSLIDQPMMRQVLSRMALQLEGQT 362

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  +   +EA  AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 363 ALLFRLARAWDR-RGDPKEALRARLFTPAAKFAICKSGIPFVAEAMEVLGGVGYCEESEL 421

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K T ++E L     +  G        + +  
Sbjct: 422 PRLYREMPVNSIWEGSGNVMCLDVLRVLSKQTGVYELLNEAFAEVKGQDRHYDRAVRQLQ 481

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K D+   R +T+++ L    A + R     +A  + +
Sbjct: 482 QRLRKPDEAQGREITQQLFLLGCGAQMLRYASPPLAQAWCQ 522


>gi|218889745|ref|YP_002438609.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218769968|emb|CAW25730.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 549

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 288/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K     + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|254236865|ref|ZP_04930188.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719]
 gi|126168796|gb|EAZ54307.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719]
          Length = 549

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 289/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELTGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|313109412|ref|ZP_07795372.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310881874|gb|EFQ40468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 549

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 288/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG   ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNAAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|77461164|ref|YP_350671.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385167|gb|ABA76680.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 549

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 200/550 (36%), Positives = 284/550 (51%), Gaps = 14/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G         E
Sbjct: 2   NLHQFAETHEVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAESRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D VEFHPA+H L+R +I  GL    W        +  A
Sbjct: 61  AGFLANQNKPVFASHDRYGHRIDLVEFHPAYHELMRTAIEHGLTSLPWAHP-----QDGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T AS+ A+   P + + W PKI + EYDP N     
Sbjct: 116 HVARASMSYLHSQAEAGSGCPLTMTFASVPAMRLQPNLAEHWLPKILATEYDPRNVGMAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN+SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNQFYIQRLKNKLGNQSNASSEVEFRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S S MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + D    R  EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSLRMGKALDHLDDRH-EAQFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + + LFS L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDVLFSELGDGHGDKRLAAHIQQL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           +       + +  AR LTE IAL   A  L  AG + ++D F+ +R        +  L  
Sbjct: 475 QAQFKDTSDIQYRARQLTEDIALGLQAKLLLEAGNSAVSDAFIASRLSGG-GRVYGALPR 533

Query: 548 RFNAAHIIDS 557
             +   I+  
Sbjct: 534 GLDVEAIVAR 543


>gi|182434223|ref|YP_001821942.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178462739|dbj|BAG17259.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 552

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 204/544 (37%), Positives = 292/544 (53%), Gaps = 8/544 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
            + +    NQPP   G +A     LL  +     +    EL   G YV S  AQ  A  A
Sbjct: 12  TAVTHEVTNQPPPLTGHDAADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWADQA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  +   G R D+VEFHPA+H+L+  S+  GL  + W        R  AH  RA
Sbjct: 72  NRHEPELRTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
               L   LE GHL   S+T A + AL  +P + K + P + +R Y+P   AP  K  + 
Sbjct: 127 GGFMLATMLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTNRAYEPGLSAPTAKRGLL 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFL
Sbjct: 187 AGMGMTEKQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFL 246

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  +  
Sbjct: 247 VPRVLADGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTR 306

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S +G+R +LA+A H+AR R V G  L+DQP+M+  +AD++L+  AAT L+ RLA
Sbjct: 307 LDCVLGSAAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLALRLA 366

Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + D A    + E A+ R+   I KYW CK  P  +AEA+EC+GG+GY E   + R YRE
Sbjct: 367 GAADRAHRGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRLYRE 426

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N I  GSGN   LD+L  L +     E   +  E   G+  +       LR  ++  
Sbjct: 427 APLNGIWEGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRTELARA 486

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           ++ +  AR + E+ AL    + L R     +AD F  +R   +       L    +   +
Sbjct: 487 EDAQLRARRVVERAALVLQGSLLVRHAPTAVADAFCASRLAGDQGLAFGTLPAGTDFGAL 546

Query: 555 IDSL 558
           +  L
Sbjct: 547 LGRL 550


>gi|254429704|ref|ZP_05043411.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195873|gb|EDX90832.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 564

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 188/550 (34%), Positives = 297/550 (54%), Gaps = 15/550 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ       NAY +D+ L   +A   +   ++ L   G    S    E   +A
Sbjct: 14  AQTHEVFNQARALEDYNAYDNDTALREAVARHGASWAEDALSAHGARTGSAEVIEWGFLA 73

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + PQ  ++   G R D V++H ++H L+   +  G+H S W        +  AH  RA
Sbjct: 74  NEHKPQFFSHDRQGYRVDLVKYHESYHRLMALGLESGMHSSPWSNP-----KPGAHVARA 128

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ YL AQ++AGH    ++T AS+ ++  TP + K+W PKI +  YDP N    +K ++ 
Sbjct: 129 AQSYLQAQVDAGHGCPLTMTFASVPSISLTPALAKEWLPKILNNAYDPRNVPHTEKQALT 188

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ A T+    I +      Y L GHKWF S+PM DAF++LAQ +G +
Sbjct: 189 IGMGMTEKQGGSDVRANTTVATAIGNEGPGEAYELVGHKWFTSAPMCDAFLVLAQTQGGL 248

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFLVPR   DGS N +  QRLKNK+GN SNA+ E+E     G+L+G+       + +M 
Sbjct: 249 SCFLVPRWRPDGSKNPIQVQRLKNKMGNVSNASSEIELRGALGWLVGEEGRGVPAIIEMV 308

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S SG R ++A+A+++A  R   G  L+DQP+M+  +AD+ L++  + A++
Sbjct: 309 AMTRFDCMIGSASGQRQAVAQAVNHAAGRAAFGKTLLDQPLMRNVLADLQLEVEGSLAIA 368

Query: 374 FRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            R+  + D++    S S E+   R+  P  KYW CK  P    EAMEC+GG+G  E+  +
Sbjct: 369 MRMGEALDQSTLDPSNSHESLLLRLGLPAGKYWICKRTPFHAYEAMECLGGNGVTEDFIM 428

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
           AR YRE+P N+I  GSGN   LD+L  L K   + +  F+ L +  GS  +  K +  L+
Sbjct: 429 ARLYREAPINAIWEGSGNVQALDMLRALGKTPAVLDTWFAELAKTQGSDARLDKAVDTLK 488

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
              S   E +  AR + ++++L   A+ L  AG   +A+ F+ +R  ++    +  L   
Sbjct: 489 REFSDMDEAEYRARDIVDRVSLTMQASQLVAAGNTAVAEAFIASRLGEHGDRNYGTLPKG 548

Query: 549 FNAAHIIDSL 558
            +   ++   
Sbjct: 549 LDLDEVLKRA 558


>gi|70732730|ref|YP_262493.1| hypothetical protein PFL_5425 [Pseudomonas fluorescens Pf-5]
 gi|68347029|gb|AAY94635.1| fadE8 [Pseudomonas fluorescens Pf-5]
          Length = 550

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/550 (35%), Positives = 284/550 (51%), Gaps = 13/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L   +  F        ++  G         E
Sbjct: 2   NLHQFAETHEVTNQPPALDGANLYRIDLPLQQWMRRFDAGWAESRVDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D VEFHPA+H L++ +I  GL    W        +  A
Sbjct: 61  AGFLANQNKPVFSSHDRFGHRIDLVEFHPAYHQLMQAAIEAGLTSLPWTDP-----QAGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T A + AL   P +   W PKI +  YDP N     
Sbjct: 116 HVARASMTYLHSQAEAGSGCPLTMTFACVPALKLQPDIADQWLPKILATRYDPRNVGMQH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGLTIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNLSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S S MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + D     ++EA ++R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSMRMGRALDH-LDDAQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGNGHGDKRLAAHINGL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           ++S     + +  AR LTE IAL   A  L  AG   ++D F+ +R        +  L  
Sbjct: 475 KESFKDTGDIQYRARQLTEDIALGLQAKLLLEAGNQVVSDAFIASRLGGQGGRVYGTLPR 534

Query: 548 RFNAAHIIDS 557
             + A I+  
Sbjct: 535 GLDVAAIVAR 544


>gi|328885969|emb|CCA59208.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 545

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 189/552 (34%), Positives = 289/552 (52%), Gaps = 19/552 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + ++SD  L   +    +      V  +L +LG    S   QE 
Sbjct: 3   ASTHTVTNQAPPLVGHDVFTSDRALAEAVERHLAPELLTEVRGDLTVLGRAAGSAQLQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+VEF PAWH LL +S+  GL         +   R   H
Sbjct: 63  GERANANPPRLRTHDRYGHRIDEVEFDPAWHRLLGKSVEAGL--------TDAWGRPGGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +++Q+EAGH    S+T A++ AL   P + + W P   S  Y+       +K
Sbjct: 115 VRRAAGFLVVSQVEAGHGCPLSMTHAAVPALRAEPELAEVWEPAALSHVYERELGPVAEK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V +G+ +TEK+GG+D+ A T++ +   +DG Y L+GHKWF S+PMSDAF++LAQ    
Sbjct: 175 PGVLLGMAMTEKQGGSDVRANTTEARPLAADGEYVLTGHKWFCSAPMSDAFLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVED 311
           + CFL+PR+L DGS N    QRLK+K+GNRSNA+ E+EF  T +   +G+       +  
Sbjct: 235 LTCFLLPRVLADGSRNAFAIQRLKDKLGNRSNASAEVEFDGTTWARRVGEEGRGLRVIMG 294

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     +D  + S + MR ++A+A+H+   R   GG L ++P+M+  +AD+AL+  AAT 
Sbjct: 295 MVAATRVDCVLGSAALMRQAVAQAVHHCAHREAFGGPLAEKPLMRNVLADLALESEAATV 354

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  RLA ++D      +E A  RI  P  KYW  K    V+AEA+EC+GG+GY+EE  + 
Sbjct: 355 LGMRLAAAYDTG--TPQELALLRIAVPAAKYWVTKRCTPVVAEALECLGGNGYVEESGMP 412

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD 489
           R  RESP NS+  GSGN   LDV+  L       +     +    G+  +  + I  +  
Sbjct: 413 RLLRESPLNSVWEGSGNVQALDVVRALRTEPAALDAFLREVGAARGADHRLDRAIRGVLT 472

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
            ++  +  +  AR LTE++AL    A L R    ++AD F   R   +  +    L    
Sbjct: 473 ELADLEGIEARARRLTERLALVLQGALLVRWAPPEVADAFCAARLGGDGGAAFGTLPHSL 532

Query: 550 NAAHIIDSLYLD 561
           +   +++   ++
Sbjct: 533 DLRALVERARVE 544


>gi|254242658|ref|ZP_04935980.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192]
 gi|126196036|gb|EAZ60099.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192]
          Length = 549

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 288/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K     + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFAETADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|296394926|ref|YP_003659810.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296182073|gb|ADG98979.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 544

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 178/542 (32%), Positives = 284/542 (52%), Gaps = 9/542 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            +    NQ P   G +     +L  AL          E++ LGE   S  AQ+   +A  
Sbjct: 3   QTHTVFNQVPPLTGWSLAEHPALAEALQRENAQAALPEIQTLGELAGSAEAQQWGDLAEA 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + PQL  +   G R D+V + P++H L+R ++  G+H + W        R  AH  RAA+
Sbjct: 63  HPPQLKTHDRYGNRIDEVVYDPSYHQLMRTAVEHGVHAAAWADP-----RPFAHLARAAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           + +  Q + GH+   ++T A + AL    ++  +  P + +REY+P  +    K  +  G
Sbjct: 118 MVVWGQTDPGHICPITMTYAVVPALRANEKLSAEHEPLLTNREYEPGLRPMSLKRGLIAG 177

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T+      DG Y ++GHKWF S+PMSD F+ LAQ  G + CF VP
Sbjct: 178 MSMTEKQGGSDVRANTTTAVAQQDGSYRITGHKWFTSAPMSDFFLTLAQTPGGLSCFFVP 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N    QRLK+K+GNRSNA+ E+E+ +   +L+GD       + +M  +  LD
Sbjct: 238 RVLPDGTRNNFFLQRLKDKLGNRSNASSEVEYDDATAWLVGDEGKGVKTIVEMVNVTRLD 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + +GM V++A+A H+A+ R   G  L DQP+M+  +AD+A++  A+      LA+ 
Sbjct: 298 CALGTSTGMSVAVAQAAHHAKHRSAFGARLADQPLMRNVLADLAVEAEASLTTGLWLASL 357

Query: 380 FDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D++ +   +A    RI   ++KY+ CK  P    EA+EC+GG+GY+EE  + R YRE+P
Sbjct: 358 LDKSVAGDGQAKTLLRISLAVSKYFICKRGPVHAGEALECLGGNGYVEESRMPRIYREAP 417

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
             S+  GSGN   LD L  + K        F+ L++  G+  +    +  L+      + 
Sbjct: 418 LLSVWEGSGNVAALDALRAIAKQPESLAVFFAELDKARGADARLDAAVDSLKGQFGDFET 477

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHGRFNAAHII 555
            +  AR +   +ALA   + L R G   +AD F  +R   D    T   L    + A I+
Sbjct: 478 IEHRARLIVGSMALALQGSLLVRYGHPAVADAFTASRLASDGFGWTFGSLPHGADLAAIL 537

Query: 556 DS 557
           + 
Sbjct: 538 ER 539


>gi|266631113|emb|CBH32113.1| putative acyl-CoA dehydrogenase [Streptomyces albaduncus]
          Length = 545

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 204/541 (37%), Positives = 290/541 (53%), Gaps = 8/541 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP   G +      LL  +     +    +L  LG    S  AQ  A  AN +
Sbjct: 8   THEVTNQPPPLTGHDTADDPVLLEGVHREGAAWHLDDLHRLGRLAGSEEAQGWADQANRH 67

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V+FHPA+H+L+  S+  G+  + W        R  AH  RAA  
Sbjct: 68  EPELRTHDRYGHRVDEVDFHPAYHSLMDVSVSAGIAGAAWTDE-----RPGAHVARAASF 122

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            L   LE GHL   S+T A + AL   P + K + P + SR YDP  + P  K  +  G+
Sbjct: 123 MLATMLEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRVPAGKRGLLAGM 182

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GGTD+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G + CFLVPR
Sbjct: 183 GMTEKQGGTDVRANTTAATEQADGRWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPR 242

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+GD       + DM  +  LD 
Sbjct: 243 VLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDC 302

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + S +G R +LA+A H+AR R V G  LIDQP+M+  +AD+AL+  AAT L+ RLA + 
Sbjct: 303 VLGSAAGTRAALAQAAHHARHRSVFGAELIDQPLMRNVLADLALESEAATTLALRLAGAA 362

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A+     E A+ R+   + KYW CK  PA +AEA+EC+GG+GY E   + R YRE+P 
Sbjct: 363 DRAQRGDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPL 422

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497
           N I  GSGN   LD+L  L +     E   + +E   G+  +       L+  + L ++ 
Sbjct: 423 NGIWEGSGNVNALDMLRALTREPESLEAYRAEVEPAAGADRRLDAAWRELQGELVLTEDA 482

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
              AR + E+ AL    + L R     +AD F  +R   +       L    + A ++  
Sbjct: 483 SLRARRVIERAALVLQGSLLVRHAPAPVADAFCASRLAGDRGLAFGTLAPGTDFAGLLGR 542

Query: 558 L 558
           L
Sbjct: 543 L 543


>gi|116052012|ref|YP_789145.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587233|gb|ABJ13248.1| possible acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 549

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 198/551 (35%), Positives = 288/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L      +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWGRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N    Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GVEVEALLARA 544


>gi|74314668|ref|YP_313087.1| isovaleryl CoA dehydrogenase [Shigella sonnei Ss046]
 gi|73858145|gb|AAZ90852.1| putative acyl coenzyme A dehydrogenase [Shigella sonnei Ss046]
          Length = 546

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|309796998|ref|ZP_07691398.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7]
 gi|308119411|gb|EFO56673.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7]
          Length = 546

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|149927464|ref|ZP_01915718.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149823737|gb|EDM82963.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 570

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 185/551 (33%), Positives = 277/551 (50%), Gaps = 17/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDS-LLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           ++    N        N +++D+ LL  +     +    E+   G+        EL  +AN
Sbjct: 18  ETHQVQNVASELHSYNLFTTDAALLEGVKREGGAWGIPEIAAFGDKCGKPEYLELGFLAN 77

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L  +   G R D V +H A+H L++ ++ +GLH   W        R+ AH +R A
Sbjct: 78  KYPPELDTHDRFGNRVDSVRYHGAYHELMKSALEEGLHSQPWTNP-----REGAHVVRGA 132

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + ++ +Q+EAGH    ++T AS+ +    P V   +  KI  R YDP N    +K S+ +
Sbjct: 133 KAFMQSQVEAGHGCPVTMTFASIPSFRLQPEVAAIFESKILHRGYDPRNLPVDEKLSITV 192

Query: 199 GLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+ A ++    +    +  +Y L GHKWFLS+PM D F++LAQ    V 
Sbjct: 193 GMGMTEKQGGSDVRANSTVATPVNQPGAGQMYSLVGHKWFLSAPMCDVFLILAQTTAGVS 252

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR L DG+ N L   RLK+K+GN+SNA+ E+EF    G+L+GD       + +M  
Sbjct: 253 CFAVPRWLPDGTKNALNVIRLKDKMGNKSNASSEVEFRGAQGWLIGDEGRGVPTIIEMVS 312

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D    S   MR  LA AIH+ ++R   G  LIDQP+M+  +AD+ L+   A A S 
Sbjct: 313 LTRFDCMGASAGLMRAGLANAIHHCKQRAAFGAKLIDQPLMQNVLADLQLEYEGAMAFSM 372

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A + D   S   EA  AR+   + KYW CK AP    E MECIGGSG +E     R +
Sbjct: 373 RMARALDLKDSDEHEAHLARLATAVGKYWICKRAPQHSYEIMECIGGSGVMENSIYPRLF 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITILRDSIS 492
           RES  N I  GSGN   LDVL  + K   +     + L +  G +    + +  L D   
Sbjct: 433 RESVINPIWEGSGNVQCLDVLRAIGKTPAVLMAFNAELNKARGGNSILDQYLDRLNDQFM 492

Query: 493 LCKED-----KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
                     +  AR + +++ALA  A+ L R   + +++ F  +R     H  +  L  
Sbjct: 493 QLNPADMHGLQYSARTMVDQMALAFEASLLVRHAPDAVSEAFCASRLAAQGHHNYGALPK 552

Query: 548 RFNAAHIIDSL 558
             N   II+  
Sbjct: 553 GLNVKSIIERA 563


>gi|293407914|ref|ZP_06651754.1| isovaleryl CoA dehydrogenase [Escherichia coli B354]
 gi|291472165|gb|EFF14647.1| isovaleryl CoA dehydrogenase [Escherichia coli B354]
          Length = 547

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/533 (35%), Positives = 279/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLS 67
            +  + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +
Sbjct: 1   MMEGDTVHWQ--THTVFNQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
            R  A   RAAR  L AQ+EAG L   ++T A+M  L    P   +DW   + S  YD  
Sbjct: 115 ARSGAFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG      
Sbjct: 235 AQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +
Sbjct: 295 RLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        +
Sbjct: 414 ESELPRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            R    L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 RRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 526


>gi|152985275|ref|YP_001346522.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960433|gb|ABR82458.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 549

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 199/551 (36%), Positives = 290/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQ P   G N Y  D  L   +  +      + L+  GE         
Sbjct: 2   NLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGELAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+ H++   G R D VEFHPA+H L+R +I   L    W        R  A
Sbjct: 61  AGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWTDP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RA   YL +Q EAG     ++T AS+ A+     + + W PKI SREYDP N A  Q
Sbjct: 116 QVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVAMEQ 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V IG+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LA 
Sbjct: 176 KAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAY 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   DGS N    QRLK+K+GN SNA+ E+E+     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+ ++ D A    EE  +AR++  + KYW CK APA+I EA EC+GG+GY+EE 
Sbjct: 356 ALALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEET 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NSI  GSGN   LDVL  L K   + + LF+ L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE +A+A  A  L  AG + ++D F+ +R  D     +  L  
Sbjct: 475 KAAFADTADIQYRARQLTEDVAVALQAKLLLEAGNSVVSDAFIGSRLGDG-GRVYGTLPR 533

Query: 548 RFNAAHIIDSL 558
                 ++   
Sbjct: 534 GAEVEALLARA 544


>gi|301024538|ref|ZP_07188213.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1]
 gi|300396537|gb|EFJ80075.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1]
          Length = 546

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+M  L    P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|327482383|gb|AEA85693.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 548

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 203/545 (37%), Positives = 290/545 (53%), Gaps = 14/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMA 77
           +++    NQ P   G N Y  D  L      +        L++ G        Q    +A
Sbjct: 7   AETHEVTNQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQ-AGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+R ++  G+    W        +  A   RA
Sbjct: 66  NENRPVFKSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWTDP-----QPGAQVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A +YL  Q EAG     ++T AS+ AL   P + + W PKI +REYDP N    QK  V 
Sbjct: 121 ALMYLHNQAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  +
Sbjct: 181 IGMAMTEKQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+     +++G+       + +M 
Sbjct: 241 SCFLLPRHRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D  I S S MR +L +A+H+   R V G  L+DQP+M+  +AD+AL+  AA AL+
Sbjct: 301 ASTRFDCMIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALT 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D  +    E  +AR++  I KYW CK AP +IAEA EC+GG+GY+EE  + R 
Sbjct: 361 LRMGRAQDH-RRDEHEDKFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRL 419

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSIS 492
           YRE+P NSI  GSGN   LDVL  L K   + E LF+ L    G +  KV I  L+ +  
Sbjct: 420 YREAPVNSIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFG 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             ++ +  AR LTE++A+A  A  L  AG   ++D F+ +R  D     H  L    + A
Sbjct: 480 DTEDIQYRARQLTEEVAVALQAKLLLEAGDAAVSDAFIASRL-DGHGRVHGTLPRGLDIA 538

Query: 553 HIIDS 557
            ++  
Sbjct: 539 ALLAR 543


>gi|324019365|gb|EGB88584.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 117-3]
          Length = 546

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|256019832|ref|ZP_05433697.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
 gi|300821280|ref|ZP_07101428.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7]
 gi|300922406|ref|ZP_07138526.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1]
 gi|300940674|ref|ZP_07155235.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1]
 gi|331680317|ref|ZP_08380976.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332280972|ref|ZP_08393385.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
 gi|300421225|gb|EFK04536.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1]
 gi|300454562|gb|EFK18055.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1]
 gi|300526169|gb|EFK47238.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7]
 gi|331071780|gb|EGI43116.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332103324|gb|EGJ06670.1| isovaleryl CoA dehydrogenase [Shigella sp. D9]
          Length = 546

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|323161979|gb|EFZ47851.1| protein aidB [Escherichia coli E128010]
          Length = 541

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNTIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|331694767|ref|YP_004331006.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326949456|gb|AEA23153.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 704

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/540 (37%), Positives = 293/540 (54%), Gaps = 11/540 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP   G +  + D  LV  +           +  LGE + S   +E AR+AN 
Sbjct: 171 THEVTNQPPPLSGYDPLACDPALVDAVEREGAGGALPTMRQLGERIASPEYREHARLANE 230

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P L  +   G R D+VEFHP+WHAL+  S+  GLH + W           AH  RAA 
Sbjct: 231 NHPILRTHDRYGHRVDEVEFHPSWHALMDLSVGWGLHAAPW----LADPGTGAHVARAAG 286

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL+ QLE GH    S+T AS+ AL     +   + P + +REY P    P  KT +  G
Sbjct: 287 FYLVGQLEQGHCCPISMTYASVPALRHDDELAAAYVPGLTAREYQPGLARPDSKTGLLAG 346

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T+     SDG Y L+GHKWF S+PM+D F+ LAQ    + CF++P
Sbjct: 347 MSMTEKQGGSDVRAGTTVATPSSDGTYRLTGHKWFTSAPMNDLFLTLAQAPAGLTCFVLP 406

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG+ N +  QRLK+K+GNRSNA+ ELE+ +  G+ LG+       + +M  +  LD
Sbjct: 407 RVLPDGTRNAIRLQRLKDKLGNRSNASAELEYDDAVGWRLGEEGRGVVTIIEMVSMTRLD 466

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S S +R +L EA+H+   R   G  L+DQP+M+  +AD+AL+  AATAL+ RLA +
Sbjct: 467 CVIGSASVIRAALTEAVHHVTHRRAFGERLVDQPLMQAVVADLALESEAATALTMRLAGA 526

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++     A      P +KY  CK APAV+AEA+EC+GG+GY+EE  + R YRE+P 
Sbjct: 527 VDRGETDFLRLAL-----PASKYLVCKRAPAVVAEALECLGGNGYVEESGMPRLYREAPL 581

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           NS+  GSGN   LDVL  + +  +  E +   ++   G+              L   ++ 
Sbjct: 582 NSVWEGSGNVTALDVLRAVTREPDSQEAVLREIDAAAGADSWFDRARTELRTELRSREQR 641

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHGRFNAAHIIDSL 558
            AR L E +AL    + L R    ++A  F+ +RFL D    T   L    ++  +++ +
Sbjct: 642 TARRLAELLALCMQGSLLLRFAPEEVASAFVSSRFLPDGPWRTAGTLPAAAHSEALVERV 701


>gi|300899726|ref|ZP_07117951.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1]
 gi|300356698|gb|EFJ72568.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1]
          Length = 546

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+M  L    P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|157158060|ref|YP_001465687.1| isovaleryl CoA dehydrogenase [Escherichia coli E24377A]
 gi|193066012|ref|ZP_03047070.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22]
 gi|194426602|ref|ZP_03059156.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171]
 gi|260847017|ref|YP_003224795.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str.
           12009]
 gi|307314865|ref|ZP_07594457.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|157080090|gb|ABV19798.1| acyl-CoA dehydrogenase family protein [Escherichia coli E24377A]
 gi|192926335|gb|EDV80971.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22]
 gi|194415341|gb|EDX31609.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171]
 gi|257762164|dbj|BAI33661.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str.
           12009]
 gi|306905668|gb|EFN36197.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|315063501|gb|ADT77828.1| isovaleryl CoA dehydrogenase [Escherichia coli W]
 gi|323380420|gb|ADX52688.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
          Length = 541

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|323946036|gb|EGB42073.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
          Length = 541

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 278/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P + +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPALFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|331681206|ref|ZP_08381843.1| protein AidB [Escherichia coli H299]
 gi|331081427|gb|EGI52588.1| protein AidB [Escherichia coli H299]
          Length = 541

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|320193567|gb|EFW68204.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli WV_060327]
          Length = 541

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYLLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|254037206|ref|ZP_04871283.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|226840312|gb|EEH72314.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43]
          Length = 546

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFLEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|191165665|ref|ZP_03027505.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A]
 gi|193070891|ref|ZP_03051823.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019]
 gi|218556739|ref|YP_002389653.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1]
 gi|260858340|ref|YP_003232231.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str.
           11368]
 gi|260870905|ref|YP_003237307.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str.
           11128]
 gi|331671092|ref|ZP_08371925.1| protein AidB [Escherichia coli TA271]
 gi|190904360|gb|EDV64069.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A]
 gi|192955837|gb|EDV86308.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019]
 gi|218363508|emb|CAR01162.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1]
 gi|257756989|dbj|BAI28491.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str.
           11368]
 gi|257767261|dbj|BAI38756.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str.
           11128]
 gi|323155996|gb|EFZ42158.1| protein aidB [Escherichia coli EPECa14]
 gi|323176054|gb|EFZ61646.1| protein aidB [Escherichia coli 1180]
 gi|331061681|gb|EGI33607.1| protein AidB [Escherichia coli TA271]
          Length = 541

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|157163652|ref|YP_001460970.1| isovaleryl CoA dehydrogenase [Escherichia coli HS]
 gi|157069332|gb|ABV08587.1| acyl-CoA dehydrogenase family protein [Escherichia coli HS]
          Length = 541

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMTFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|218707798|ref|YP_002415317.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026]
 gi|293402814|ref|ZP_06646911.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|298378344|ref|ZP_06988228.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|331665851|ref|ZP_08366745.1| protein AidB [Escherichia coli TA143]
 gi|218434895|emb|CAR15833.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026]
 gi|291429729|gb|EFF02743.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|298280678|gb|EFI22179.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|331056902|gb|EGI28896.1| protein AidB [Escherichia coli TA143]
          Length = 541

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+M  L    P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|256390950|ref|YP_003112514.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256357176|gb|ACU70673.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 550

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/539 (36%), Positives = 279/539 (51%), Gaps = 10/539 (1%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNT 81
           LNQ P   G NAY++D  LVA +       S    EL  LG    S  A+E  R+A  N 
Sbjct: 14  LNQVPPLAGYNAYTADPSLVAAVHRLFGSGSATDTELTGLGALAGSFEAREWGRLAEANH 73

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  +   G R D+VEFHPAWH L+  ++  G+  + W      +     H  RAA++ 
Sbjct: 74  PILRTHDRYGRRIDEVEFHPAWHELMTVAVSHGIAAAPWLEDAGTL----RHTARAAKML 129

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +  Q E GHL   S+T A++ AL   P +  +W P++ S  YD   + P  K     G+G
Sbjct: 130 VWGQTEGGHLCPVSMTYAAVPALAADPMLAAEWTPRLASTSYDFGLRDPATKAGCLAGMG 189

Query: 202 LTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +TEK+GG+D+ A T++    +  D  Y L GHKWF S+PM D F++LAQ  G + CF++P
Sbjct: 190 MTEKQGGSDVRANTTKATPAAGSDREYTLIGHKWFTSAPMCDVFLVLAQAPGGLTCFVIP 249

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DGS N    QRLK+K+GNR+NA+ E+EF NT  + LGD       + +M  +  LD
Sbjct: 250 RVLPDGSRNSFRLQRLKDKLGNRANASSEVEFHNTRAWRLGDEGRGVATIIEMVAMTRLD 309

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
               S S MR +LAEA+H+ R R   G +L DQP+M+  +AD+AL+  AAT  S  LA +
Sbjct: 310 CVTGSASLMRAALAEAVHHTRHRMAFGKLLADQPLMRNVLADLALESEAATLTSLHLAAA 369

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D   S      + RI   + KYW  K      AEA+EC+GG+GY+EE  + R YRE+P 
Sbjct: 370 TDAG-SDPAARKFRRIGLAVAKYWVTKRCAPFAAEALECLGGNGYVEESGMPRLYREAPL 428

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           NSI  GSGN   LDVL  L +   +++   + +    G+  +           +   D+ 
Sbjct: 429 NSIWEGSGNVNALDVLRALGREDGVWDAFCAEVGTACGADARFDAAFKELKDEVASVDEA 488

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            AR   E++AL    + + R    +  D F+ +R   +   T   L        I    
Sbjct: 489 GARRFVERMALLMQGSLMLRYAPTESGDAFVASRLAGDWGRTFGTLPRGLAIEAIAGRA 547


>gi|215489531|ref|YP_002331962.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215267603|emb|CAS12058.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 541

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/527 (35%), Positives = 278/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 520


>gi|146284066|ref|YP_001174219.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572271|gb|ABP81377.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 619

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 202/545 (37%), Positives = 289/545 (53%), Gaps = 14/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMA 77
           +++    NQ P   G N Y  D  L      +        L++ G        Q    +A
Sbjct: 78  AETHEVTNQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQ-AGFLA 136

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+R ++  G+    W        +  A   RA
Sbjct: 137 NENRPVFKSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWTDP-----QPGAQVARA 191

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A +YL  Q EAG     ++T AS+ AL   P + + W PKI +REYDP N    QK  V 
Sbjct: 192 ALMYLHNQAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVT 251

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  +
Sbjct: 252 IGMAMTEKQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGL 311

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N    QRLKNK+GN +NA+ E+E+     +++G+       + +M 
Sbjct: 312 SCFLLPRHRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMV 371

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D  I S S MR +L +A+H+   R V G  L+DQP+M+  +AD+AL+  AA AL+
Sbjct: 372 ASTRFDCMIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALT 431

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D  +    E  +AR++  I KYW CK AP +IAEA EC+GG+GY+EE  + R 
Sbjct: 432 LRMGRAQDH-RRDEHEDKFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRL 490

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSIS 492
           YRE+P NSI  GSGN   LDVL  L K   + E LF+ L    G +  KV I  L+ +  
Sbjct: 491 YREAPVNSIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFG 550

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             ++ +  AR LTE++A+   A  L  AG   ++D F+ +R  D     H  L    + A
Sbjct: 551 DTEDIQYRARQLTEEVAVTLQAKLLLEAGDAAVSDAFIASRL-DGHGRVHGTLPRGLDIA 609

Query: 553 HIIDS 557
            ++  
Sbjct: 610 ALLAR 614


>gi|323935312|gb|EGB31660.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
          Length = 541

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSGRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|218702884|ref|YP_002410513.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39]
 gi|218372870|emb|CAR20750.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39]
          Length = 541

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/527 (35%), Positives = 278/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|170680540|ref|YP_001746582.1| isovaleryl CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|170518258|gb|ACB16436.1| acyl-CoA dehydrogenase family protein [Escherichia coli SMS-3-5]
          Length = 541

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKHGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|66047565|ref|YP_237406.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258272|gb|AAY39368.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 549

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/550 (34%), Positives = 276/550 (50%), Gaps = 14/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQHRPEFASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWTEP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KNGATIGMAMTEKQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRVGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 IVPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGSL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KAAFQDTGDIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGALPT 533

Query: 548 RFNAAHIIDS 557
             +   ++  
Sbjct: 534 GVDVETLLQR 543


>gi|323189934|gb|EFZ75212.1| protein aidB [Escherichia coli RN587/1]
          Length = 541

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDALLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|15804776|ref|NP_290817.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|162139725|ref|NP_313190.3| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. Sakai]
 gi|291285599|ref|YP_003502417.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
 gi|12519175|gb|AAG59383.1|AE005651_12 putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7
           str. EDL933]
 gi|13364640|dbj|BAB38586.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7
           str. Sakai]
 gi|209750138|gb|ACI73376.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750140|gb|ACI73377.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750142|gb|ACI73378.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750144|gb|ACI73379.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|209750146|gb|ACI73380.1| putative acyl coenzyme A dehydrogenase [Escherichia coli]
 gi|290765472|gb|ADD59433.1| Putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
          Length = 546

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|71726097|gb|AAZ39220.1| putative acyl-CoA dehydrogenase [Janthinobacterium lividum]
          Length = 560

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 204/561 (36%), Positives = 292/561 (52%), Gaps = 25/561 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELAR 75
              D+    NQ   F  +N ++ D  L  AL+        +E++ LGE +       LAR
Sbjct: 2   NAFDTHEVFNQATPFENVNLFACDPALIEALLREGGGAALQEIDALGEKLGRAETYALAR 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN +TP+L  +   G R D+V FHPAWH L+   +  G H S W           A   
Sbjct: 62  QANIHTPELQQFDRAGRRVDEVLFHPAWHELMAILVGAGAHASPWASP-----GPGAQVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTT---PRVHKDWAPKIFSREYDPTNKAPMQ 192
           RAA   L+ Q+E G     ++T AS+ AL      P + + W PKI SREYDP +    Q
Sbjct: 117 RAAAYLLVGQVENGTQCPVTMTYASVPALRQALDLPHIAQRWLPKILSREYDPRSLPVEQ 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQK------------ISDGIYCLSGHKWFLSSPMS 240
           K    +G+G+TEK+GG+D+ + T++                + G + + GHKWF S+P  
Sbjct: 177 KRGALVGMGMTEKQGGSDVRSNTTRAVPVPPAEAQALFGSEAGGAWRIVGHKWFFSAPQC 236

Query: 241 DAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           DA ++LAQ + G + CF +PR L DGS N +  QRLK+K+GNRSNA+ E+EF+N +G+L+
Sbjct: 237 DAHLILAQADEGGLSCFFLPRYLPDGSRNAIRVQRLKDKLGNRSNASSEVEFTNAYGWLV 296

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G        + +M     LD  + S   MR +L++A+H+AR+R V G  L +QP+M+  +
Sbjct: 297 GQPGRGIPTILEMASHTRLDCVLGSAGIMRAALSQALHHARQRAVFGKPLAEQPLMQNVL 356

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+AL+  AATA + RLA  FDE K   ++A  AR++ P  KYW CK  P    EAME +
Sbjct: 357 ADLALESEAATAFALRLARCFDE-KDDPQQAMLARVLTPAGKYWICKRGPGFGFEAMEVL 415

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG+GY+E+  +AR YRE P NSI  GSGN M LDVL    K     + L + L       
Sbjct: 416 GGTGYVEDAPLARLYRELPVNSIWEGSGNVMCLDVLRAFGKSPAARDALAAELALAGDDD 475

Query: 480 G--KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
                    L   +   + D+  AR L+E+I LA   A L R     +A  FL++R    
Sbjct: 476 AILVDYRARLLADLDGPQTDEFGARQLSERIVLAVQGALLLRHAPPFVAQAFLQSRLAQA 535

Query: 538 CHSTHCMLHGRFNAAHIIDSL 558
               +  L    + A I+   
Sbjct: 536 PGGAYGRLPAGTDCAAILARA 556


>gi|323965574|gb|EGB61028.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
 gi|327250128|gb|EGE61847.1| protein aidB [Escherichia coli STEC_7v]
          Length = 541

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 186/519 (35%), Positives = 277/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + + R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|300816512|ref|ZP_07096733.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1]
 gi|300906017|ref|ZP_07123741.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1]
 gi|301302604|ref|ZP_07208734.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1]
 gi|301325951|ref|ZP_07219372.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1]
 gi|300402184|gb|EFJ85722.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1]
 gi|300530742|gb|EFK51804.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1]
 gi|300842129|gb|EFK69889.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1]
 gi|300847304|gb|EFK75064.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1]
 gi|315255532|gb|EFU35500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 85-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|300949153|ref|ZP_07163195.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1]
 gi|300451401|gb|EFK15021.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DSVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|110644544|ref|YP_672274.1| isovaleryl CoA dehydrogenase [Escherichia coli 536]
 gi|300988635|ref|ZP_07178775.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|110346136|gb|ABG72373.1| AidB protein [Escherichia coli 536]
 gi|300305868|gb|EFJ60388.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|324013830|gb|EGB83049.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 60-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 279/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   + +  +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 525


>gi|293476498|ref|ZP_06664906.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|291320951|gb|EFE60393.1| acyl-CoA dehydrogenase [Escherichia coli B088]
          Length = 547

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/533 (35%), Positives = 279/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLS 67
            +  + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +
Sbjct: 1   MMEGDTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            R  A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD  
Sbjct: 115 ARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG      
Sbjct: 235 AQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +
Sbjct: 295 RLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        +
Sbjct: 414 ESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            R    L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 RRLQQQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 526


>gi|227886770|ref|ZP_04004575.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972]
 gi|300987248|ref|ZP_07178077.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|222035957|emb|CAP78702.1| Protein aidB [Escherichia coli LF82]
 gi|227836343|gb|EEJ46809.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972]
 gi|300407725|gb|EFJ91263.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|307556354|gb|ADN49129.1| acyl-CoA dehydrogenase family protein [Escherichia coli ABU 83972]
 gi|315293531|gb|EFU52883.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 153-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 525


>gi|300918352|ref|ZP_07134953.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1]
 gi|300414484|gb|EFJ97794.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|26251082|ref|NP_757122.1| isovaleryl CoA dehydrogenase [Escherichia coli CFT073]
 gi|26111514|gb|AAN83696.1|AE016771_207 AidB protein [Escherichia coli CFT073]
          Length = 547

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/533 (35%), Positives = 279/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLS 67
            +  + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +
Sbjct: 1   MMEGDTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            R  A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD  
Sbjct: 115 ARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG      
Sbjct: 235 AQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +
Sbjct: 295 RLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        +
Sbjct: 414 ESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            R    L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 RRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 526


>gi|300928003|ref|ZP_07143556.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1]
 gi|301646634|ref|ZP_07246500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1]
 gi|300463954|gb|EFK27447.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1]
 gi|301075181|gb|EFK89987.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1]
          Length = 546

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|315299068|gb|EFU58322.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 16-3]
          Length = 546

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 279/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   + +  +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|168751461|ref|ZP_02776483.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168754758|ref|ZP_02779765.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168760429|ref|ZP_02785436.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168766466|ref|ZP_02791473.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168774100|ref|ZP_02799107.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168780619|ref|ZP_02805626.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168784824|ref|ZP_02809831.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC869]
 gi|168801842|ref|ZP_02826849.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC508]
 gi|195935977|ref|ZP_03081359.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. EC4024]
 gi|208808434|ref|ZP_03250771.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208812533|ref|ZP_03253862.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208820724|ref|ZP_03261044.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209399702|ref|YP_002273729.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217326338|ref|ZP_03442422.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254796206|ref|YP_003081043.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261225307|ref|ZP_05939588.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255441|ref|ZP_05947974.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|187770307|gb|EDU34151.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188014520|gb|EDU52642.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4113]
 gi|189001861|gb|EDU70847.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189357896|gb|EDU76315.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189364227|gb|EDU82646.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189368913|gb|EDU87329.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189374887|gb|EDU93303.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376069|gb|EDU94485.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC508]
 gi|208728235|gb|EDZ77836.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208733810|gb|EDZ82497.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740847|gb|EDZ88529.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161102|gb|ACI38535.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217322559|gb|EEC30983.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254595606|gb|ACT74967.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320190681|gb|EFW65331.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638945|gb|EFX08591.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. G5101]
 gi|320644314|gb|EFX13379.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. 493-89]
 gi|320649632|gb|EFX18156.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. H 2687]
 gi|320655028|gb|EFX22989.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320660535|gb|EFX27996.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665804|gb|EFX32841.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. LSU-61]
 gi|326345481|gb|EGD69224.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. 1125]
 gi|326346662|gb|EGD70396.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli O157:H7 str. 1044]
          Length = 541

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|324005250|gb|EGB74469.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 57-2]
          Length = 546

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 525


>gi|254448697|ref|ZP_05062155.1| fadE8 [gamma proteobacterium HTCC5015]
 gi|198261705|gb|EDY85992.1| fadE8 [gamma proteobacterium HTCC5015]
          Length = 579

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 193/548 (35%), Positives = 282/548 (51%), Gaps = 14/548 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMA 77
           S++    NQPP     N +  D  LV  + +       + +  +G+ +      E    A
Sbjct: 33  SETHEVFNQPPHLEDFNTFEQDQPLVDALHHAGGDWGVEAVTRIGDLLGRAEWIERGFQA 92

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P+ H++   G R D+V+FHPA+H L+  +I   +H + W+       +K AH +R 
Sbjct: 93  NENKPEFHSHDRYGHRIDRVDFHPAYHDLMALAIEHNIHAAPWN-----TPQKGAHAVRL 147

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q EAG     ++T A + A+  TP V K W PKI SREYDP+ +   +K    
Sbjct: 148 AMNYLYNQNEAGSACPLTMTFACVPAIQKTPSVAKQWLPKILSREYDPSFQPIDKKRGAT 207

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           IG+ +TEK+GGTD+ A TS    + D       Y + GHKWF S+PM DAF+ LAQ E  
Sbjct: 208 IGMAMTEKQGGTDVRANTSYAYPMGDKEGAGAEYEIVGHKWFCSAPMCDAFLTLAQTESG 267

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFL+PR   DGS N    QRLK+K+GNRSNA+ E+EF   F ++LGD       + +M
Sbjct: 268 LSCFLLPRWRPDGSRNEFYIQRLKDKMGNRSNASSEVEFRGAFAWMLGDEGRGVPTIIEM 327

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D  I S S MR ++A+  H+   R V G  LI+QP+M+   AD+ L++  A A+
Sbjct: 328 VALTRYDCMIGSTSLMRQAVAQVTHHIAHREVMGKRLIEQPLMQNVAADLCLEVEGALAM 387

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + RLA + D  +   +E    R+   + KYW CK A   I E+ EC+GG GY+EE  ++R
Sbjct: 388 TMRLATALDTPED-EQEQNLVRLTTAVGKYWICKRATHHIGESQECLGGIGYVEESIMSR 446

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD--LGSSGKKVITILRDS 490
            YRE+P NSI  GSGN   LDVL  + K   + +   + LE+     +     +  L+  
Sbjct: 447 LYREAPVNSIWEGSGNVQCLDVLRAVGKAPEVLDTFIAELEKASSRQAEYDASLAALKSQ 506

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           +S  +  +  AR + E +A    A  L   G   I + F   R  +    +   L    +
Sbjct: 507 LSDFENFQFRARSIVEHMARQMQACQLILMGNELIYNAFCRARLGEQRGLSFGNLPADID 566

Query: 551 AAHIIDSL 558
              II+  
Sbjct: 567 CRAIIERA 574


>gi|296100949|ref|YP_003611095.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295055408|gb|ADF60146.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 540

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/529 (37%), Positives = 283/529 (53%), Gaps = 10/529 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +A   +    EL   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPAPLSNSNLFLSDCALRDAVAREGAEWDSELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y P GER D V FHPAWH L++    + +H   W+       RK + 
Sbjct: 59  GRLANVNPPELLRYDPTGERLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARKGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   ++W   + S  YDP      Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPVTMTFAATPLLQQALPEPFQNWLTPLLSDRYDPHLAPGAQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S   MR +L+ A+++A +R   G  LIDQP+M+  ++ +AL +   TAL
Sbjct: 295 GGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMRDVLSRMALVLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D+ ++  +EAA+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDK-RADPQEAAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +F+ L     Q  G       +  +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPGMFDLLAEDFAQVKGQDRHFDRSWRQLQQK 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           L K  +   R +  ++ L  + + + R     +A  +     LD    T
Sbjct: 474 LRKPQEAQGREIAHQLFLLGAGSQMLRHASPPVAQAWCR-MMLDTRGGT 521


>gi|218697937|ref|YP_002405604.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989]
 gi|312965861|ref|ZP_07780087.1| protein aidB [Escherichia coli 2362-75]
 gi|218354669|emb|CAV01673.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989]
 gi|312289104|gb|EFR16998.1| protein aidB [Escherichia coli 2362-75]
 gi|320200683|gb|EFW75269.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli EC4100B]
 gi|323182293|gb|EFZ67703.1| protein aidB [Escherichia coli 1357]
 gi|324118752|gb|EGC12644.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
          Length = 541

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|191170861|ref|ZP_03032413.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11]
 gi|190909085|gb|EDV68672.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11]
          Length = 541

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 278/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   + +  +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 520


>gi|330976861|gb|EGH76890.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 549

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/551 (34%), Positives = 280/551 (50%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEGSSRFGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANRHKPEFASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT-----YPQPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP+N     
Sbjct: 116 HVARAAMSYLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPSNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KNGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TEKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D  +    E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R + +    +  L  
Sbjct: 475 KAAFQDTGDIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV-SSGRVYGALPK 533

Query: 548 RFNAAHIIDSL 558
             +   ++   
Sbjct: 534 GVDVETLLQRA 544


>gi|330938240|gb|EGH41917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 549

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/551 (34%), Positives = 279/551 (50%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQHKPEFASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KNGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLALAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D  +    E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R + +    +  L  
Sbjct: 475 KAAFQDTGDIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV-SSGRVYGALPT 533

Query: 548 RFNAAHIIDSL 558
             +   ++   
Sbjct: 534 GVDVETLLQRA 544


>gi|311894642|dbj|BAJ27050.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 548

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 203/550 (36%), Positives = 288/550 (52%), Gaps = 8/550 (1%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M   H  + +    NQ P   G +  +   LL  L          EL  LG    S  AQ
Sbjct: 1   MTASHPTATTHHVTNQAPPLTGHDVAADPVLLEGLDREGAGWHRAELHRLGRLAGSEQAQ 60

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           + A  AN + P+L  +   G R D+VEFHPA+H L+  S       +    +     R  
Sbjct: 61  QWADQANRHEPELRTHDRYGNRVDEVEFHPAYHHLMDLS-----VGAGLAGAAWADPRPG 115

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           AH  RAA   +   LE GHL   S+T A + AL   P +   + P + SR YDP  +AP 
Sbjct: 116 AHVARAAGFMVATTLEPGHLCPVSMTYAVVPALRHAPELAAAYEPLLTSRTYDPGLRAPA 175

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K  +  G+G+TEK+GG+D+ A T+   + +DG + L GHKWF S+PM+D F++LAQ  G
Sbjct: 176 GKRGLLAGMGMTEKQGGSDVRANTTAAVRQADGSWRLRGHKWFTSAPMNDLFLVLAQAPG 235

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CFLVPR+L DGS N    QRLK+K+GNRSNA+ E EF +T  +L+G        + +
Sbjct: 236 GLSCFLVPRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDDTAAWLVGAEGKGVRTIIE 295

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  LD  + S +G R +LA+A H+AR R   G +LIDQP+M+  +AD+AL+  AAT 
Sbjct: 296 MVTMTRLDCVLGSAAGTRAALAQAAHHARHRAAFGALLIDQPLMRNVLADLALESEAATT 355

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L+ RLA + D A+   + E A  RI   + KYW CK  PA +AEA+EC+GG+GY E   +
Sbjct: 356 LALRLAGAADRAQHGDTGEKALLRIATAVAKYWVCKRQPAAVAEALECLGGNGYDEASGL 415

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
            R YRE+P NSI  GSGN   LD+   L +     + L + ++   G+  +       LR
Sbjct: 416 PRLYREAPLNSIWEGSGNVTALDLQRALVREPETLDALAAEIDLAAGADPRLDAAWHALR 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
             +    +    AR + E+ AL   AA L R     +AD F  +R   +       L   
Sbjct: 476 AELRPTPDAPLRARRVIERTALVLQAALLVRHAPAPVADAFCASRLAGDHGLAFGTLAPG 535

Query: 549 FNAAHIIDSL 558
            +   ++D L
Sbjct: 536 TDFTALLDRL 545


>gi|330987628|gb|EGH85731.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 549

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/548 (34%), Positives = 276/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G         E
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEMWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|170021803|ref|YP_001726757.1| isovaleryl CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|194439544|ref|ZP_03071618.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1]
 gi|253775188|ref|YP_003038019.1| isovaleryl CoA dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254164116|ref|YP_003047224.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|256025122|ref|ZP_05438987.1| isovaleryl CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|297520036|ref|ZP_06938422.1| isovaleryl CoA dehydrogenase [Escherichia coli OP50]
 gi|301028009|ref|ZP_07191293.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1]
 gi|312974004|ref|ZP_07788175.1| protein aidB [Escherichia coli 1827-70]
 gi|169756731|gb|ACA79430.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|194421543|gb|EDX37556.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1]
 gi|242379708|emb|CAQ34533.1| isovaleryl-CoA dehydrogenase / predicted acyl-CoA dehydrogenase
           [Escherichia coli BL21(DE3)]
 gi|253326232|gb|ACT30834.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253976017|gb|ACT41688.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|253980173|gb|ACT45843.1| isovaleryl CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|299878919|gb|EFI87130.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1]
 gi|309704692|emb|CBJ04042.1| probable acyl CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310331538|gb|EFP98794.1| protein aidB [Escherichia coli 1827-70]
 gi|323940106|gb|EGB36300.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323960231|gb|EGB55872.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
 gi|323970558|gb|EGB65817.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
          Length = 541

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|293417690|ref|ZP_06660312.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|291430408|gb|EFF03406.1| acyl-CoA dehydrogenase [Escherichia coli B185]
          Length = 546

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ + + DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAEHLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|301045980|ref|ZP_07193163.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|300302023|gb|EFJ58408.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
          Length = 546

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +    
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQM 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 525


>gi|312948836|gb|ADR29663.1| isovaleryl CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 541

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 520


>gi|331660762|ref|ZP_08361694.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
 gi|331051804|gb|EGI23843.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
          Length = 541

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 278/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   + +  +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|94500182|ref|ZP_01306716.1| fadE8 [Oceanobacter sp. RED65]
 gi|94427755|gb|EAT12731.1| fadE8 [Oceanobacter sp. RED65]
          Length = 571

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/555 (33%), Positives = 289/555 (52%), Gaps = 22/555 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMAN 78
           ++    NQP      NAY+SD  L   +  F    H+ EL   G+ V S    E    AN
Sbjct: 20  ETHEVFNQPSSLDPYNAYASDPALQHWVRIFDGAWHESELHTYGQRVGSD-LFEAGFAAN 78

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+   +   GER D+V+FHP++H L++ +I  G H   W        +  AH  RAA
Sbjct: 79  KYKPEFKPHNRFGERIDQVDFHPSYHLLMQTAIEAGHHSLPWCEK-----KPGAHVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             Y+  Q + G     ++T A++ ALM  P + K+W PKI +  YD  N    +K  + I
Sbjct: 134 LEYMHTQADPGSGCPLTMTFAAVPALMHQPNIAKEWIPKITANHYDHRNIPFYEKQGLTI 193

Query: 199 GLGLTEKRGGTDIAAITSQG---QKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEG--- 251
           G+ +TEK+GG+D+ A T++    +K+  G  Y + GHKWF S+PM DAF++LA       
Sbjct: 194 GMAMTEKQGGSDVRANTTKAYPLEKVGSGEAYEIVGHKWFCSAPMCDAFLVLAHTYDVQG 253

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               + CFL+PR   DG  N +  QRLK+K+GN SNA+ E+E+   F +++G+       
Sbjct: 254 KSNGLSCFLLPRWRPDGRKNEMYVQRLKDKMGNVSNASSEVEYRGAFAWMIGEEGRGVRT 313

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S   MR +LA+A H+   R   G  L +QP+M+  +AD+A++  A
Sbjct: 314 IIEMVSMTRFDCMVGSSGIMRQALAQAYHHTSGRAAFGKNLHEQPLMQNVLADLAIESEA 373

Query: 369 ATALSFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           A A+S R+A+S D+ +S  E   EA ++R+   I KYW CK       E MECIGG G +
Sbjct: 374 ALAISMRVAHSLDKLQSNPEDEQEARFSRVATAIGKYWICKRTAQFTYECMECIGGVGVV 433

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKV 483
           E+  + R YRESP N+I  GSGN   LDVL  ++K   + +   + L +  G      + 
Sbjct: 434 EDNVLPRLYRESPINAIWEGSGNVQCLDVLRAMQKDPKVVDAFMAELAKAHGRYDVFDQY 493

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
           +  L+D     +  +  AR + EK+ALA  A+ L +    DIA  ++++R        + 
Sbjct: 494 LAALKDEFQDLQTLEYRARTVVEKLALAWQASTLIQFADRDIAKAYIDSRLTGKHGQYYG 553

Query: 544 MLHGRFNAAHIIDSL 558
            L    +A  I+  +
Sbjct: 554 TLPASVDAQLIMQRV 568


>gi|289625806|ref|ZP_06458760.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289648411|ref|ZP_06479754.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330867201|gb|EGH01910.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330871089|gb|EGH05798.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 549

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/548 (34%), Positives = 276/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G         E
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|89899335|ref|YP_521806.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89344072|gb|ABD68275.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 562

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 282/547 (51%), Gaps = 13/547 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMA 77
           +D+    N        N Y+ D+ L   +          EL   G+   S    EL  +A
Sbjct: 15  ADTHELSNLSTELCDYNMYTQDAALREAVQREGGQWAEGELSEFGQMTGSADYLELGNLA 74

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+   +   G R D V+FHP++H L++ SI  GLH S W        R  AH  RA
Sbjct: 75  NKFQPEFDTHDRFGNRIDLVKFHPSYHQLMKTSIEHGLHASPWT-----APRAGAHVARA 129

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ +L  Q+EAGH    ++T A++ AL     +   W PK+ +R YDP N    QK  V 
Sbjct: 130 AKSFLHGQVEAGHGCPITMTFAAVPALRLQSDLASVWEPKVTARVYDPRNVPVEQKQGVT 189

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+   +++   +  G     Y L GHK+F+S+PM DAF++LAQ  G +
Sbjct: 190 IGMAMTEKQGGSDVRTNSTRAYPVGTGGPGQAYELVGHKYFVSAPMCDAFLVLAQAPGGL 249

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DGS N +   RLK K+GN SNA+ E E      +++G+       + +M 
Sbjct: 250 SCFLLPRWRPDGSKNPMQVLRLKKKMGNASNASSETELRGALAWMVGEEGRGVRNIIEMV 309

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S +GMR++ ++A+H+   R   G +L  QP+M+  +AD+AL+  AAT L+
Sbjct: 310 SMTRFDCMIGSSAGMRMAASQALHHCSVRSAFGQVLNQQPLMQNVLADLALESEAATTLT 369

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D  +   +E    R++  + KYW CK  P    EAMECIGGSG +E+  + R 
Sbjct: 370 MRMARAMDN-RFEEQEDLLVRLVTAVGKYWICKRTPNHAYEAMECIGGSGVMEDSMMPRL 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE+P N+I  GSGN   LDVL  L K   + +  F+ + Q  G+     + I  L   +
Sbjct: 429 YREAPVNTIWEGSGNVQCLDVLRALSKTPAVVDAFFAEVNQARGAQALLDRHIAALATDL 488

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
               + +  AR + +++ALA  A+ L R     ++D F E+R        +  L    +A
Sbjct: 489 KDLADFEYRARDVVDRMALALQASLLVRHAPAFVSDAFCESRLGQVGQHNYGTLPRGVDA 548

Query: 552 AHIIDSL 558
             II   
Sbjct: 549 GAIIARA 555


>gi|457172|gb|AAC18889.1| putative; homology to acyl CoA dehydrogenases and isovaleryl CoA
           dehydrogenases [Escherichia coli]
 gi|537028|gb|AAA97083.1| CG Site No. 18553; induced by alkylating agents; an apparent
           frameshift in GenBank Accession Number L20915 results in
           two overlapping orfs in that sequence [Escherichia coli
           str. K-12 substr. MG1655]
          Length = 546

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|331644935|ref|ZP_08346052.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|331035910|gb|EGI08148.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
          Length = 546

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|300955250|ref|ZP_07167643.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1]
 gi|300317827|gb|EFJ67611.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1]
          Length = 546

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DSVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L G KWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGDKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|170766651|ref|ZP_02901104.1| acyl-CoA dehydrogenase family protein [Escherichia albertii
           TW07627]
 gi|170124089|gb|EDS93020.1| acyl-CoA dehydrogenase family protein [Escherichia albertii
           TW07627]
          Length = 541

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/519 (35%), Positives = 278/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      VR  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + A+++  +RHV G  LI+QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|82779433|ref|YP_405782.1| isovaleryl CoA dehydrogenase [Shigella dysenteriae Sd197]
 gi|81243581|gb|ABB64291.1| putative acyl coenzyme A dehydrogenase [Shigella dysenteriae Sd197]
          Length = 542

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/521 (35%), Positives = 276/521 (52%), Gaps = 9/521 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +   +LL         + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517


>gi|237729115|ref|ZP_04559596.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|226908844|gb|EEH94762.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2]
          Length = 546

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/533 (35%), Positives = 281/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLS 67
               + +H    +    NQP      N Y SD  L  A+I          L  +G+ + +
Sbjct: 1   MTEGDTMHWQ--THTVFNQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN   P+L  Y P G+R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            R+     RAAR  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD  
Sbjct: 115 ARQGTFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPAPFHDWLTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGRQKRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+     
Sbjct: 235 AQAKGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFHDAIGWLLGEEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S   MR + + AI++A +R V G  LI+QP+M++ +  +AL +
Sbjct: 295 RHILKMGGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLGRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFSVCKSGMPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDVL +L K   ++E L     +  G        +
Sbjct: 414 ESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYEMLSEAFAEVKGQDRHYDRMV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            +    L K  + L R +T+++ L    A + R     +A  + +        
Sbjct: 474 RQLQQRLRKPSEALGREITQQLFLLGCGAQMLRYASPPVAQAWCQMMLDTRGG 526


>gi|89110907|ref|AP_004687.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           W3110]
 gi|162135915|ref|NP_418608.6| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|170083633|ref|YP_001732953.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238903294|ref|YP_002929090.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952]
 gi|12644215|sp|P33224|AIDB_ECOLI RecName: Full=Putative acyl-CoA dehydrogenase AidB
 gi|206582016|pdb|3DJL|A Chain A, Crystal Structure Of Alkylation Response Protein E. Coli
           Aidb
 gi|457174|gb|AAC18890.1| alternative putative coding sequence; GTG start codon; homology to
           acyl CoA dehydrogenases and isovaleryl CoA
           dehydrogenases [Escherichia coli]
 gi|85676938|dbj|BAE78188.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082384|gb|AAC77144.2| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|169891468|gb|ACB05175.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861568|gb|ACR63566.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952]
 gi|260450986|gb|ACX41408.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|315138741|dbj|BAJ45900.1| isovaleryl CoA dehydrogenase [Escherichia coli DH1]
          Length = 541

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|194434588|ref|ZP_03066845.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012]
 gi|194417173|gb|EDX33285.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012]
 gi|332083670|gb|EGI88888.1| protein aidB [Shigella dysenteriae 155-74]
          Length = 541

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|306815598|ref|ZP_07449747.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101]
 gi|305851260|gb|EFM51715.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101]
          Length = 541

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHILSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQVLKYASPPMAQAWCKVMLDTRGG 520


>gi|307140881|ref|ZP_07500237.1| isovaleryl CoA dehydrogenase [Escherichia coli H736]
 gi|284924370|emb|CBG37489.1| probable acyl CoA dehydrogenase [Escherichia coli 042]
 gi|332346267|gb|AEE59601.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 541

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|309787690|ref|ZP_07682301.1| protein aidB [Shigella dysenteriae 1617]
 gi|308924440|gb|EFP69936.1| protein aidB [Shigella dysenteriae 1617]
          Length = 537

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 185/519 (35%), Positives = 275/519 (52%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +   +LL         +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|330969464|gb|EGH69530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 549

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/550 (34%), Positives = 276/550 (50%), Gaps = 14/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQHKPEFASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWTEP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KNGATIGMAMTEKQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRVGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KAAFQDTGDIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGALPT 533

Query: 548 RFNAAHIIDS 557
             +   ++  
Sbjct: 534 GVDVETLLRR 543


>gi|71737641|ref|YP_276496.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558194|gb|AAZ37405.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320330538|gb|EFW86517.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330873632|gb|EGH07781.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 549

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/548 (34%), Positives = 276/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G         E
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    +G+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATLGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|320322677|gb|EFW78770.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. B076]
          Length = 549

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/548 (34%), Positives = 275/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G         E
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  R A  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARVAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    +G+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATLGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|188492162|ref|ZP_02999432.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638]
 gi|188487361|gb|EDU62464.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638]
          Length = 541

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THIVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDYVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|187733139|ref|YP_001882876.1| isovaleryl CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|187430131|gb|ACD09405.1| acyl-CoA dehydrogenase family protein [Shigella boydii CDC 3083-94]
          Length = 541

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|110808102|ref|YP_691622.1| isovaleryl CoA dehydrogenase [Shigella flexneri 5 str. 8401]
 gi|110617650|gb|ABF06317.1| putative acyl coenzyme A dehydrogenase [Shigella flexneri 5 str.
           8401]
 gi|332749331|gb|EGJ79752.1| protein aidB [Shigella flexneri 4343-70]
 gi|333009036|gb|EGK28492.1| protein aidB [Shigella flexneri K-218]
          Length = 541

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTIFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|331656015|ref|ZP_08357003.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
 gi|331046369|gb|EGI18459.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
          Length = 546

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGAYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|82546571|ref|YP_410518.1| isovaleryl CoA dehydrogenase [Shigella boydii Sb227]
 gi|81247982|gb|ABB68690.1| putative acyl coenzyme A dehydrogenase [Shigella boydii Sb227]
          Length = 546

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|257482198|ref|ZP_05636239.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331011338|gb|EGH91394.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 549

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/548 (34%), Positives = 275/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G        Q 
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGPLMQ- 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYD  N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|320187361|gb|EFW62055.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella flexneri CDC 796-83]
 gi|332087102|gb|EGI92236.1| protein aidB [Shigella boydii 3594-74]
          Length = 541

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|117626533|ref|YP_859856.1| isovaleryl CoA dehydrogenase [Escherichia coli APEC O1]
 gi|115515657|gb|ABJ03732.1| putative acyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|315288468|gb|EFU47866.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 110-3]
          Length = 546

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAWCKVMLDTRGG 525


>gi|281181283|dbj|BAI57613.1| putative acyl-CoA dehydrogenase [Escherichia coli SE15]
          Length = 541

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQTWCKVMLDTRGG 520


>gi|91213736|ref|YP_543722.1| isovaleryl CoA dehydrogenase [Escherichia coli UTI89]
 gi|237703855|ref|ZP_04534336.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|91075310|gb|ABE10191.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|226901767|gb|EEH88026.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
          Length = 547

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/533 (35%), Positives = 279/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLS 67
            +  + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +
Sbjct: 1   MMEGDTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            R  A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD  
Sbjct: 115 ARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG      
Sbjct: 235 AQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +
Sbjct: 295 RLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        +
Sbjct: 414 ESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            R    L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 RRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAWCKVMLDTRGG 526


>gi|330952998|gb|EGH53258.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 549

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/551 (34%), Positives = 276/551 (50%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPPL  G N Y  D  L      F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPLLDGANLYRIDVPLQEWSRRFGAGWAQSRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQHKPEFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVQSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRTVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK AP +I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPGMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRQLAAHIGKL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R +      +  L  
Sbjct: 475 KAAFQDTGDIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLVSG-GGVYGALPK 533

Query: 548 RFNAAHIIDSL 558
             +   ++   
Sbjct: 534 GVDVETLLQRA 544


>gi|331650312|ref|ZP_08351384.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
 gi|331040706|gb|EGI12864.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
          Length = 546

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 TFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R ++ ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREISHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 525


>gi|323171625|gb|EFZ57271.1| protein aidB [Escherichia coli LT-68]
          Length = 541

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSARYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|331671340|ref|ZP_08372138.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
 gi|331071185|gb|EGI42542.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
          Length = 546

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G   D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRHLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG     T  + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRL  ++D  ++ ++EA +AR+  P  K+  CK    ++AEAME +GG GY EE  +
Sbjct: 358 ALLFRLVRAWDR-RADAKEALWARLFTPAVKFVICKRGMPLVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T K+ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELGREITHKLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|330908529|gb|EGH37048.1| alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Escherichia coli AA86]
          Length = 541

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 185/527 (35%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R    
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGTF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R ++ ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREISHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 520


>gi|218561346|ref|YP_002394259.1| isovaleryl CoA dehydrogenase [Escherichia coli S88]
 gi|218368115|emb|CAR05922.1| isovaleryl CoA dehydrogenase [Escherichia coli S88]
 gi|294490556|gb|ADE89312.1| acyl-CoA dehydrogenase family protein [Escherichia coli IHE3034]
 gi|307629259|gb|ADN73563.1| isovaleryl CoA dehydrogenase [Escherichia coli UM146]
 gi|323950744|gb|EGB46622.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|323955474|gb|EGB51238.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
          Length = 541

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 277/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAWCKVMLDTRGG 520


>gi|330811901|ref|YP_004356363.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380009|gb|AEA71359.1| Putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 549

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/550 (35%), Positives = 284/550 (51%), Gaps = 14/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G         E
Sbjct: 2   NLHQFAETHDVTNQPPSLDGANLYRIDLPLQQWSQRFGAGWAQARIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D VEFHPA+H L+R ++  GL    W        +  A
Sbjct: 61  AGFLANQNKPVFSSHDRYGHRIDLVEFHPAYHQLMRTAVEHGLPSLPWAHP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T AS+ AL   P + + W PK+ + EYDP N     
Sbjct: 116 HVARASMTYLHSQAEAGTGCPLTMTFASVPALRLQPDLAEHWVPKVLATEYDPRNVGMAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGVTLGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  +
Sbjct: 296 IIEMVAMTRFDCMVGSSALMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESES 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + D   +   EA +AR++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSLRMGRALDH-LNDEHEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + E LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGMLEVLFRELGDGHGDKRLAGHIHQL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
             +     + +  AR LTE IA+   A  L  AG ++++D F+ +R   +    +  L  
Sbjct: 475 HAAFKDTDDIQYRARQLTEDIAVGLQAKLLLEAGNSEVSDAFIASRL-GSVGRVYGALPR 533

Query: 548 RFNAAHIIDS 557
             N   I+  
Sbjct: 534 GLNVEAIVTR 543


>gi|319793833|ref|YP_004155473.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315596296|gb|ADU37362.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 546

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/549 (34%), Positives = 291/549 (53%), Gaps = 20/549 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANY 79
           +    NQP      N + ++  L   +      +    L+ LG  + S   Q  AR+AN 
Sbjct: 4   THEVFNQPAPLADYNLFETNRPLRDALKFNAPQLQVAPLQELGVTIGSAEMQTHARLANI 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+LH +   G R D+VEFHP++H L+  ++  GLH + W  +         H +RAA 
Sbjct: 64  HTPELHTHDRFGRRIDEVEFHPSYHVLMSAAVGAGLHGTPWAGTSA-----SPHVLRAAG 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L  +LE   L   S++ A   AL +   V+ DW PK+ S  YDP  K+   K  V +G
Sbjct: 119 FMLFTELEPSMLCPISMSYAVTPALRSNAAVYADWGPKLTSLWYDPALKSFKDKPGVTMG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ A T+Q  +   D     Y ++GHKWF S+PM DAF++LAQ    + C
Sbjct: 179 MGMTEKQGGSDVRANTTQAVRDGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSC 238

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F +PR+L DG+ N +  QRLK+K+GN++NA+ E+EF     +L+G+       + +M  +
Sbjct: 239 FFLPRVLPDGTRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTM 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ +   MR +L+ AI++A +R+  G  LI+QP+MK  +AD+AL+  A+TAL+ R
Sbjct: 299 TRLDCALGTSGLMRQALSIAINHASQRNAFGKPLIEQPLMKNVLADLALESEASTALAIR 358

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IAR 432
           LA +FD       E   AR++ P+ K+W CK       EAMEC+GG+GY+EE     +AR
Sbjct: 359 LARAFD-YPDDEHERLMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMAR 417

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  G+GN M LD+L  L KG +    L   L    G      +  L D++ 
Sbjct: 418 VYREMPLNSIWEGAGNIMALDLLRGLRKG-DAVAALTKELAPARGQ--HAALDRLADALP 474

Query: 493 LCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
              E    +  AR L + +ALA  A+ L +     +   F  +R   +  +    L    
Sbjct: 475 ARIEAMASEVEARRLAQDVALAVQASLLAQTAPPAVVGAFCASRLGGDWGNAFGTLGAGT 534

Query: 550 NAAHIIDSL 558
           +   I+   
Sbjct: 535 DFDSIVQRA 543


>gi|323527685|ref|YP_004229838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323384687|gb|ADX56778.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 568

 Score =  468 bits (1205), Expect = e-129,   Method: Composition-based stats.
 Identities = 205/570 (35%), Positives = 305/570 (53%), Gaps = 29/570 (5%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQE 72
           Q H    +    NQ P     N +S+D+ L A +    +  H++ L   G  + +     
Sbjct: 2   QRHSFGQTHEVTNQVPPLADYNLFSTDAALSAAVERDGAAWHRDALLRHGAALTTPETLA 61

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA +AN +TP+L  + P GER D +EFHPAWHALL     +GLH   +        R  A
Sbjct: 62  LAELANRHTPELVTHSPRGERIDALEFHPAWHALLALLRREGLHALPFSDP-----RPGA 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              R A  +L AQ+E+G L   ++T AS+  L   P++      K+++RE+DP +     
Sbjct: 117 MAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYAREHDPRDLPLAH 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           KTS  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA ++LA+
Sbjct: 177 KTSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDAHLVLAR 236

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD     
Sbjct: 237 THDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGV 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD  I S + MR +L +AIH+AR R   G  L+DQP+M+  +AD+AL+ 
Sbjct: 297 PTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLADLALES 356

Query: 367 AAATALSFRLANSFDE-----------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            AAT L  RLA++F++           + +   E A+ RI+ P  KYW CK       EA
Sbjct: 357 EAATVLFMRLAHAFEQSADAAATSAATSSAALAERAWRRIVTPAAKYWVCKRTLEFTGEA 416

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+  + D
Sbjct: 417 MEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAQWQAD 476

Query: 476 LGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
             +       + + + +L    +  +G AR + ++I L + A  L +     +AD F+  
Sbjct: 477 AAAHPALRAALGKLAATLHEPAEHREGSARRIAQQIVLIAQATLLVKHAPAAVADPFIAT 536

Query: 533 RFLDNCHST---HCMLHGRFNAAHIIDSLY 559
           R  + C  +   +  L   F+   II+  +
Sbjct: 537 RLAEGCGESGRVYGTLPATFDHVAIIERAF 566


>gi|209921676|ref|YP_002295760.1| isovaleryl CoA dehydrogenase [Escherichia coli SE11]
 gi|209914935|dbj|BAG80009.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
          Length = 546

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 187/529 (35%), Positives = 277/529 (52%), Gaps = 9/529 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71
           + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + 
Sbjct: 4   DTVHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  
Sbjct: 62  ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++  +A+ + L       +DW   + S  YD      
Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLLAPFQDWTTPLLSDRYDSHLLPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        + 
Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   T
Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 477 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 525


>gi|333011169|gb|EGK30583.1| protein aidB [Shigella flexneri K-272]
 gi|333012637|gb|EGK32017.1| protein aidB [Shigella flexneri K-227]
          Length = 541

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/527 (35%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTIFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   + W   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQGWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|298489012|ref|ZP_07007035.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156510|gb|EFH97607.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 549

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/548 (34%), Positives = 275/548 (50%), Gaps = 14/548 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G         E
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGP-LME 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN N P   ++   G R D +EFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQNKPAFASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWTDP-----QPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q E G     ++T AS+ AL   P + + W PK+ S EYD  N     
Sbjct: 116 HVARAAMSYLHTQAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAAL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R        +  L  
Sbjct: 475 KGAFQDTSDIQYRARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGTLPR 533

Query: 548 RFNAAHII 555
             +   ++
Sbjct: 534 GVDVETLL 541


>gi|296138746|ref|YP_003645989.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026880|gb|ADG77650.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 549

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 184/546 (33%), Positives = 274/546 (50%), Gaps = 13/546 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ    +  +A     LL A+ +   +   +E+   G    S  A      AN +
Sbjct: 4   THEVFNQATPLVDYDAAQYPPLLDAVRSAGATDSLEEIHATGRRAGSAEAIAWGEQANAH 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V + PA+H L+  +I  GLH + W+          AH  RAA+ 
Sbjct: 64  PPVLKTHDRFGNRIDEVTYDPAYHQLMSAAIEQGLHAAPWESDS-----PHAHLTRAAKF 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +   ++AGH    S+T A++ AL  TP +   + P + +R YDP  + P  K  +  G+
Sbjct: 119 SVWTSVDAGHTCPISMTYAAVPALRHTPELAAQYEPLLAARVYDPVLRVPTTKRGLTAGM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++     DG Y L+GHKWF S+PMSD F+ LAQ  G + C LVPR
Sbjct: 179 SMTEKQGGSDVRAGTTRAAPQPDGSYLLTGHKWFTSAPMSDMFLTLAQAPGGLSCVLVPR 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N    QRLK+K+GN SNA+ E+E+    G L+G+       + +M  +  LD 
Sbjct: 239 ILPDGSRNRFHLQRLKDKLGNHSNASSEIEYDGAVGHLVGEEGAGVRTIVEMVNMTRLDC 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S + MR+   +A H+   R+  G +LIDQP+M+  +AD+A++  AAT ++  LA   
Sbjct: 299 TIGSAALMRIGTQQAAHHVAHRNAFGAVLIDQPLMRNVLADLAVEAEAATTVAMWLAELT 358

Query: 381 DEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D A++ +        A   RI   I+K+  CK  P   AEA+EC GG+GY+EE  + + Y
Sbjct: 359 DLAQAGATMADGSPAADLRRIALAISKFHVCKRGPIHAAEAIECFGGNGYVEESGMPKLY 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RE+P  SI  GSGN   LDVL    +       LF  L+   G+  +    +  L+D +S
Sbjct: 419 REAPLLSIWEGSGNVAALDVLRAAGRQPATVAALFGFLDGAAGADERLDAAVIRLKDELS 478

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
              + +  AR + E  ALA   A L   G    AD F   R   +       L    +  
Sbjct: 479 DVDQLEYRARRVVEAAALAIQGALLVTRGEQAAADAFCATRLGADWGGVFGTLPRGLDVG 538

Query: 553 HIIDSL 558
            +I   
Sbjct: 539 TLIARA 544


>gi|320177552|gb|EFW52542.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella boydii ATCC 9905]
          Length = 541

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/527 (35%), Positives = 275/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP        Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSKLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D   + ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDRC-ADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|320176387|gb|EFW51442.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Shigella dysenteriae CDC 74-1112]
          Length = 541

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/527 (35%), Positives = 275/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+ EK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMAEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M   ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 520


>gi|323975471|gb|EGB70572.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
          Length = 541

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/519 (35%), Positives = 276/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASGEVEFQDAIGWLLGQEGEGVRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K   CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKLVICKRGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + + R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|91785604|ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91689558|gb|ABE32758.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 561

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 195/561 (34%), Positives = 296/561 (52%), Gaps = 22/561 (3%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELA 74
           H    +    NQ P     N +SSD+ L A +    +  H++ L   G  + +     LA
Sbjct: 4   HSFGQTHEVTNQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTTPETLALA 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN +TP+L  + P GER D +EFHP+WH LL     +GLH   +        ++ A  
Sbjct: 64  ELANRHTPELFTHSPRGERIDALEFHPSWHTLLSLLRREGLHALPFSDP-----QRGAMV 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+DP +     K 
Sbjct: 119 ARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRDVPLTHKN 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE 250
           S  IG+G+TEK+GG+D+ +  ++    +       Y L GHKWF S+P  DA ++L + +
Sbjct: 179 SAMIGMGMTEKQGGSDVRSNQTRAYATAGSGRGAAYRLVGHKWFFSAPQCDAHLVLGRTD 238

Query: 251 GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD       
Sbjct: 239 DHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGVPT 298

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+  A
Sbjct: 299 IIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALESEA 358

Query: 369 ATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AT L  RLA +F    D A +   E A+ RI+ P  KYW CK A     EAME  GG+GY
Sbjct: 359 ATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGY 418

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           +E   +AR YRE+P NSI  GSGN M LDVL  +E+  +    LF+  +++  +      
Sbjct: 419 VETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAARALFAAWQREAQAHPALSA 478

Query: 485 TILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            + + + +     +  +  AR + +++ L + A  L      ++A+ F+  R  D C  +
Sbjct: 479 ALGKLAAAFNGPAEHREASARRIAQQVVLIAQATLLLEHAPAEVAEAFIATRLADGCGES 538

Query: 542 ---HCMLHGRFNAAHIIDSLY 559
              +  L   F+ A I++  +
Sbjct: 539 GRVYGTLPATFDHAAIVERAF 559


>gi|288918131|ref|ZP_06412488.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288350513|gb|EFC84733.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 563

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 198/524 (37%), Positives = 278/524 (53%), Gaps = 14/524 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP  +G +      LL AL+        +EL  LG       AQ     AN +
Sbjct: 9   THRVTNQPPPLVGHDVAEDVPLLAALVREGAGDQAEELHRLGRLAGGAEAQSWGDEANRH 68

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   G R D+V+FHPAWH LL  ++  GL  S W        R  AH  RAA +
Sbjct: 69  PPVLRTHDRYGNRIDEVDFHPAWHELLTVAVRAGLAGSAWAAD-----RPGAHVARAAGI 123

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +  Q+E GHL   S+T A++  + T P +   + P + S  YDP  + P  K  +  G+
Sbjct: 124 LVWGQVEHGHLCPVSMTYAAVPVVRTAPDLAAAYLPGLTSSVYDPGLRPPESKRGLLAGM 183

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           G+TEK+GG+D+ A  ++   +  G Y L GHKWF S+PM+D F++LAQ  G + C LVPR
Sbjct: 184 GMTEKQGGSDVRANETRATPVGGGTYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPR 243

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DGS N    QRLK+K+GNRSNA+ E EF  T   L+G+       + DM  L  LDS
Sbjct: 244 VLPDGSRNPFLIQRLKDKLGNRSNASAEPEFDGTLAHLVGEEGRGVRAIIDMVALTRLDS 303

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI + SGMR +L  A H+ R R   G +L+D+P+M+  +AD+AL+  AA  L  R+A + 
Sbjct: 304 AIGTASGMRAALVAAAHHVRHRSAFGSLLVDKPLMRNVLADLALESEAAVTLVMRVAGAV 363

Query: 381 DEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D A+   E E A+ R+   + KYW CK  PA++AEA+EC+GG+GY+E+  + R YRE+P 
Sbjct: 364 DRAEQGDEGERAFLRLATGLAKYWLCKRQPAMVAEALECLGGNGYVEDSGLPRLYREAPL 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK-- 495
           N I  GSGN   LDVL  L +         + ++   G +         LR  +      
Sbjct: 424 NGIWEGSGNVNALDVLRALGREPASLAAYAAEIDAAAGGNRHLDDAWRRLRHDLDALLTA 483

Query: 496 ----EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
               E + +AR L E++AL    A L R     +AD F   R  
Sbjct: 484 DEPVELELVARRLVERMALLLQGALLVRHAPPAVADAFCVARVG 527


>gi|256784373|ref|ZP_05522804.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289768252|ref|ZP_06527630.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289698451|gb|EFD65880.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 557

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 193/558 (34%), Positives = 281/558 (50%), Gaps = 27/558 (4%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELA 74
            +    NQ P   G + ++SD  LV  +   P+         EL  LG    S   QE  
Sbjct: 4   STHTVTNQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWG 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN + P L  +   G R D+V+FHPAWH LL + +  GL         +   R   H 
Sbjct: 64  AQANAHPPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL--------TDAWSRPGGHV 115

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA   +  Q+EAG+    S+T A++ AL   P +  +W P++ SR YD   +    K 
Sbjct: 116 RRAAAFLMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKA 175

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
            V  G+G+TEK+GG+D+ A ++  +    DG Y L+GHKWF S+PMSD F++LA+  G  
Sbjct: 176 GVLFGMGMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGT 235

Query: 254 ----------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                      CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF+ T+   +G   
Sbjct: 236 VRAEGNGGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + DM     LD  + S   MR ++A+A+H+   R   G  L DQP+M+  +AD+A
Sbjct: 296 RGVPTIIDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLA 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++  AAT L  RLA + D A    E E A  R+  P  KYW  K    V+ EA EC+GG+
Sbjct: 356 VESEAATTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGN 415

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK- 481
           GY+EE  + R  RESP NS+  G+GN   LDVL  L +     +   + +    G+  + 
Sbjct: 416 GYVEESGLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRL 475

Query: 482 -KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
              I  L   ++     +G AR L E++AL    A L R    ++AD F  +R   +  +
Sbjct: 476 DAAIRGLLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGA 535

Query: 541 THCMLHGRFNAAHIIDSL 558
               L    + A +++  
Sbjct: 536 AFGTLPPTLDLAAVVERA 553


>gi|170696029|ref|ZP_02887166.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170139021|gb|EDT07212.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 569

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 202/571 (35%), Positives = 301/571 (52%), Gaps = 30/571 (5%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQE 72
           Q H    +    NQ P     N +S+D+ L A +    +  H++ L   G  + +     
Sbjct: 2   QRHSFGQTHEVTNQVPPLADYNLFSTDAALSAALERDGAAWHRDALLRHGAALTTPETLA 61

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +        R  A
Sbjct: 62  LAELANRHTPELSTHSPRGERIDALEFHPAWHELLALLRREGLHALPFSDP-----RPGA 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              R A  +L AQ+E+G L   ++T AS+  L   P++ +    K+++R +DP +    Q
Sbjct: 117 MAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFETLRDKLYARGHDPRDVPLAQ 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K S  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA ++LA+
Sbjct: 177 KASAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDAHLVLAR 236

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD     
Sbjct: 237 THDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGV 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD  I S + MR +L +AIH+AR R   G  L+DQP+M+  +AD+AL+ 
Sbjct: 297 PTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLADLALES 356

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIM------------APITKYWCCKMAPAVIAE 414
            AATAL  RLA +F+++       + A                P  KYW CK A     E
Sbjct: 357 EAATALFMRLAQAFEQSADAGTATSAADSAAASAERAWRRIVTPAAKYWVCKRALEFTGE 416

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           AME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +  + LF+  + 
Sbjct: 417 AMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQALFAQWQA 476

Query: 475 DLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           D  +       + + + +L    +  +  AR + ++I L + A  L R     +A+ F+ 
Sbjct: 477 DAAAHPALSAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVRHSPAVVAEAFIA 536

Query: 532 NRFLDNCHST---HCMLHGRFNAAHIIDSLY 559
            R  D C  +   +  L   F+ A I++  +
Sbjct: 537 TRLADGCGESGRVYGTLPATFDHAAIVERAF 567


>gi|218692520|ref|YP_002400732.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a]
 gi|218430084|emb|CAR10931.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a]
          Length = 541

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/527 (35%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQ       N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQLIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCKVMLDTRGG 520


>gi|315617595|gb|EFU98201.1| protein aidB [Escherichia coli 3431]
          Length = 541

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 185/519 (35%), Positives = 277/519 (53%), Gaps = 9/519 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      VR  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + A+++  +RHV G  LI+QP+M+  ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI   SGN M LDVL +L K   +++ L     +  G        + R    
Sbjct: 414 LYREMPVNSIWEDSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           L K  + L R +T ++ L    A + +     +A  + +
Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512


>gi|94312747|ref|YP_585956.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93356599|gb|ABF10687.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 548

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 176/551 (31%), Positives = 273/551 (49%), Gaps = 19/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMAN 78
            +    N        N Y++D  L   +    +  H+ EL   G  + S     +A  AN
Sbjct: 4   STHEVTNVVTELQDYNVYTTDLPLQEAVRRAGAGAHEAELTAYGARLGSAETIRMAEEAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
           +  P+LH +   G R D+VEFHP+WH ++R +    L    +        R  A    AA
Sbjct: 64  HFKPELHTFDRQGRRIDRVEFHPSWHGVMRMAREQNLVAQPFADP-----RPGAWAAYAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              +  Q+EAG     S+T A +  L   P +    APK++SR YD  +    QK S+ +
Sbjct: 119 GFSMHGQIEAGSQCPNSMTFACIPVLQREPELFAALAPKLYSRTYDARDIPLEQKDSILV 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+ A T++ + +      G Y ++GHKWF S+PM DA +++A+ E    
Sbjct: 179 GMGMTEKQGGSDVRANTTRAEPLRGEGRGGEYLITGHKWFFSAPMCDAHLVVARTESGPA 238

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N +  QRLK+K+GNRSN++ E+EF   +G ++G+       + +M  
Sbjct: 239 CFYVPRYRPDGTKNAVQIQRLKDKVGNRSNSSSEVEFRGAWGRMIGEEGRGIPTIIEMAT 298

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  + S   +R  L +A+H+ R R   G  LIDQP+M+  +AD+AL+  AAT +  
Sbjct: 299 FTRLNCVMGSTGLIRQCLVQALHHTRHRSAFGKTLIDQPLMRNVLADMALESEAATLMMM 358

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL  +F  A     + AY RI+ P  K+W  K +  +  EAME  GG+GY++E  + R Y
Sbjct: 359 RLTEAFALADEDPLQRAYKRIVTPAAKFWLAKRSVELSGEAMEVFGGNGYMDEGPMGRLY 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILR 488
           RE+P  SI  GSGN M LD++  + +     + L   L      +  L  +   ++  LR
Sbjct: 419 RETPVISIWEGSGNVMALDMIRAISREPQAMQALLEDLTPFCRQDARLSDAATMLVAGLR 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
                 +  + LAR   + + L   A  L       + D F+ +RF         ML   
Sbjct: 479 TQ---GEATEWLARRHAQLLVLLVQARLLGEHAPAAVTDAFIASRFDAQWGRVFGMLPDG 535

Query: 549 FNAAHIIDSLY 559
              A I+D  +
Sbjct: 536 VAHAAILDRAW 546


>gi|21224435|ref|NP_630214.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|13276833|emb|CAC33951.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 557

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 193/558 (34%), Positives = 281/558 (50%), Gaps = 27/558 (4%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELA 74
            +    NQ P   G + ++SD  LV  +   P+         EL  LG    S   QE  
Sbjct: 4   STHTVTNQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWG 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN + P L  +   G R D+V+FHPAWH LL + +  GL         +   R   H 
Sbjct: 64  AQANAHPPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL--------TDAWSRPGGHV 115

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA   +  Q+EAG+    S+T A++ AL   P +  +W P++ SR YD   +    K 
Sbjct: 116 RRAAAFLMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKA 175

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
            V  G+G+TEK+GG+D+ A ++  +    DG Y L+GHKWF S+PMSD F++LA+  G  
Sbjct: 176 GVLFGMGMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGT 235

Query: 254 ----------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
                      CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E+EF+ T+   +G   
Sbjct: 236 ARAEGNGGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + DM     LD  + S   MR ++A+A+H+   R   G  L DQP+M+  +AD+A
Sbjct: 296 RGVPTIIDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLA 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++  AAT L  RLA + D A    E E A  R+  P  KYW  K    V+ EA EC+GG+
Sbjct: 356 VESEAATTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGN 415

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK- 481
           GY+EE  + R  RESP NS+  G+GN   LDVL  L +     +   + +    G+  + 
Sbjct: 416 GYVEESGLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRL 475

Query: 482 -KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
              I  L   ++     +G AR L E++AL    A L R    ++AD F  +R   +  +
Sbjct: 476 DAAIRGLLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGA 535

Query: 541 THCMLHGRFNAAHIIDSL 558
               L    + A +++  
Sbjct: 536 AFGTLPPTLDLAAVVERA 553


>gi|302185136|ref|ZP_07261809.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           642]
          Length = 549

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/550 (33%), Positives = 274/550 (49%), Gaps = 14/550 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L        +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQEWSRRLGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANQHKPEFVSHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWTDP-----QSGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 QVARAAMSYLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KRGATIGMAMTEKQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPA 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  I S + MR +L +A H+   R VSG +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A++ R+  + D       E  + R++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALAMTLRMGRALDH-LDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K     + LF  L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGKL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + +     + +  AR LTE IA+A     L  AG   ++D F+  R +      +  L  
Sbjct: 475 KAAFQDTGDLQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLVSG-GRVYGALPR 533

Query: 548 RFNAAHIIDS 557
             +   ++  
Sbjct: 534 GVDVETLLQR 543


>gi|187925733|ref|YP_001897375.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187716927|gb|ACD18151.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 561

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 198/561 (35%), Positives = 296/561 (52%), Gaps = 22/561 (3%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELA 74
           H    +    NQ P     N +SSD+ L A +    +  H+  L   G  + +     LA
Sbjct: 4   HSFGQTHEVTNQVPPLADYNLFSSDAALSAALERDGAGWHRGALVRHGAALTTPETLALA 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN + P+L  + P GER D +EFHP+WHALL     +GLH   +        ++ A  
Sbjct: 64  ELANRHEPELVTHSPRGERIDALEFHPSWHALLSLLRREGLHALPFSDP-----QRGAMV 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+D  +    QKT
Sbjct: 119 ARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDSRDLPLKQKT 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE 250
           S  IG+G+TEK+GG+D+ +  ++    +       Y L GHKWF S+P  DA ++L + +
Sbjct: 179 SAMIGMGMTEKQGGSDVRSNQTRAYSTAGSGRGAAYRLVGHKWFFSAPQCDAHLVLGRTD 238

Query: 251 GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              G  CF VPR   DG  N +  QRLK+K+GNRSNA+ E+EF + FG ++GD       
Sbjct: 239 EHEGLSCFYVPRFAPDGRKNNVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGVPT 298

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+  A
Sbjct: 299 IIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALESEA 358

Query: 369 ATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AT L  RLA +F    D A +   E A+ RI+ P  KYW CK A     EAME  GG+GY
Sbjct: 359 ATVLFMRLARAFEESTDAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGY 418

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKK 482
           +E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+    D  +  +   
Sbjct: 419 VETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAAWHADAQAHPALSA 478

Query: 483 VITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            +  L  +++   E  +  AR + +++ L + A  L +    ++A+ F+  R  + C  +
Sbjct: 479 ALGKLAATLNGPAEHREASARRIAQQVVLIAQATLLLKHAPAEVAEAFVATRLAEGCGES 538

Query: 542 ---HCMLHGRFNAAHIIDSLY 559
              +  L   F+ A II+  +
Sbjct: 539 GRVYGTLPATFDHAAIIERAF 559


>gi|152980833|ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
 gi|151280910|gb|ABR89320.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 547

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 193/547 (35%), Positives = 291/547 (53%), Gaps = 14/547 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P  +  N +S DS+LV  I N   S    EL  LG  + +    +L ++AN 
Sbjct: 5   THEVSNQVPELLDYNLFSCDSVLVTAIKNSAASWYAPELAALGAALGTRETLQLGQLANQ 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  +   G R D+V+FHP+WH LL       LH   W +      R  AH  R A 
Sbjct: 65  HLPELQTHDRFGNRIDRVDFHPSWHQLLAMQRRASLHALPWSQP-----RAGAHIARTAA 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL AQ+E+G L   ++T A++  L   P +      K+FS  +D  +     K S+ +G
Sbjct: 120 YYLQAQVESGSLCPVTMTFAAIPLLQQEPALFATLKDKLFSTGHDERDLPLPDKASMLVG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ + T+  + +        Y L+GHKWF S+PM DA ++LA+ E  + C
Sbjct: 180 MGMTEKQGGSDVRSNTTVARPLESAGRGQPYALTGHKWFFSAPMCDAHLVLARTEAGLSC 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DGS N +  QRLK+K+GNRSN++ E+EF + +G ++G+       + +M   
Sbjct: 240 FFVPRWRPDGSKNAILIQRLKDKLGNRSNSSSEVEFQDAYGVMVGEDGRGIPTIIEMANH 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  I S   MR +L +AIH+AR RH  G  L +Q +M+  +AD+AL+  AAT L  R
Sbjct: 300 TRLDCVIGSTGLMRNALVQAIHHARHRHAFGLPLAEQALMQNVLADLALESEAATRLMLR 359

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +  EA     E A+ R++ P  K+W CK A     E ME  GG+GY+E   +AR YR
Sbjct: 360 LAQAA-EAIDDPVERAWRRVVTPAAKFWICKRALEFTGECMEVWGGNGYVENAPMARMYR 418

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + K  + F+ L   L          +++I  LR  ++L
Sbjct: 419 EAPVNSIWEGSGNVMCLDVLRAIAKEADAFKLLLDALLDIAKEDKGLRELIAELRTDLAL 478

Query: 494 CKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
               + + AR  T+++ L + +  + +A   +IAD F+ +R        +  L     A 
Sbjct: 479 PATQQEMQARRFTQRLVLVAQSCLMLQAAPANIADAFISSRLDAESGRVYGTLAAPLAAK 538

Query: 553 HIIDSLY 559
            I++  +
Sbjct: 539 EILERAW 545


>gi|283834806|ref|ZP_06354547.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC
           29220]
 gi|291069052|gb|EFE07161.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC
           29220]
          Length = 540

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 187/528 (35%), Positives = 277/528 (52%), Gaps = 9/528 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L  A+I          L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G+R D   FHPAWH L++    + +H   W+       R+   
Sbjct: 59  GRLANAFPPELLRYDAQGQRLDDARFHPAWHLLMQGLCANRVHNLAWEDD----ARQGTF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P    DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGTLCPVTMTFAATPLLFQMLPAPFHDWLTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M
Sbjct: 235 LSCFFVPRFLPDGGRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGEEGEGIRHILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S   MR + + AI++A +R V G  LI+QP+M++ ++ +AL +   TAL
Sbjct: 295 GGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RENAKEALWARLFTPAAKFSICKSGMPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYDMLSEAFAEVKGQDRHYDRLVRQLQQH 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           L K  + L R +T+++ L    A + R     +A  + +         
Sbjct: 474 LRKPSEELGREITQQLFLLGCGAQMLRYASPPVAQAWCQMMLDTRGGR 521


>gi|197103313|ref|YP_002128691.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480589|gb|ACG80116.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 550

 Score =  465 bits (1196), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/545 (36%), Positives = 293/545 (53%), Gaps = 15/545 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP   G N +SSD+ L+  +          +L   GE + +    +   +AN 
Sbjct: 9   THEVFNQPPPLEGYNLFSSDAALIEAVRREGADWALDDLTAYGEQLGTAETLQHGALANR 68

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+LHA+   G R D VE HPA+HAL+   +  G+H S W        +  AH  RAA 
Sbjct: 69  DPPRLHAFDRFGRRIDWVEHHPAYHALMGMQVAQGIHASPWSEP-----KPGAHVHRAAG 123

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           LY+  Q+EAG     S+T A+   L       +   PK++SR YDP ++   +K+   IG
Sbjct: 124 LYMSGQVEAGTSCPISMTYAAAPVLAQAGASVRALLPKLYSRRYDPAHRPVAEKSGALIG 183

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ A T++   ++ G     Y + GHKWF+S+PM DAF++LAQ  G + C
Sbjct: 184 MGMTEKQGGSDVRANTTRAAPLASGAPGEAYRIVGHKWFMSAPMCDAFLILAQAPGGLSC 243

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DG  N L +QRLK+K+GNRSNA+ E+EF    G+L+GD       + +M   
Sbjct: 244 FFVPRWTPDGDLNALRFQRLKDKLGNRSNASAEVEFEGALGWLVGDEGRGVATILEMVGY 303

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD+ + S    R +LA+A+H+AR R      L+DQP+M   +AD+AL++ AATAL+FR
Sbjct: 304 TRLDNVLGSAGVQRQALAQALHHARHRTAFQKRLVDQPLMTNVLADLALEVEAATALAFR 363

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +FD A+    E    R++ P  K+W CK  P + AEA+E +GG+GYIE+  + R YR
Sbjct: 364 LARAFD-AREDEPETLLRRLVTPAAKFWVCKRGPILAAEALEVLGGAGYIEDSGMPRLYR 422

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           E P  SI  GSGN + LDVL  L++     E + + L    G   +++   +   +S  +
Sbjct: 423 ELPVYSIWEGSGNVVCLDVLRALQREPRCLEAVAAELAPLAGVD-RRLDAQIEVVLSAPR 481

Query: 496 E--DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
           +   +G  R     + +   AA L R     I+D FL  R          +L    +   
Sbjct: 482 QGLGEGDLRRYCRDLVVTVQAALLARHAPPIISDAFLATRVGGE-RGAFGLLPAGLDLHG 540

Query: 554 IIDSL 558
           I+D  
Sbjct: 541 IVDRA 545


>gi|332142200|ref|YP_004427938.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552222|gb|AEA98940.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii str. 'Deep ecotype']
          Length = 560

 Score =  465 bits (1196), Expect = e-128,   Method: Composition-based stats.
 Identities = 200/558 (35%), Positives = 296/558 (53%), Gaps = 20/558 (3%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPS---VVHKELELLGEYVLS 67
           M  +++  D+    NQP +    N +  D LL   +    P     + + L   G    +
Sbjct: 1   MTSLNR-FDTHTVDNQPSILNSYNLWRDDKLLKTYVTQQLPEKQHWIAELLGCFGALAGN 59

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E   +AN N P+L  +   G R D V+FHP++HAL++ ++   +H   W       
Sbjct: 60  -ELMEHGELANKNKPELRTFDRYGRRIDHVDFHPSYHALMQSAMKHNVHNYSWQNE---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            +  AH +RA  +Y+  Q E+G     ++T A++ A+     +   W  K+ +  YDP +
Sbjct: 115 QQDGAHTLRAVLMYMHYQAESGTSCPLTMTHAAVPAMRYGKSLPSYWLDKLINGVYDPRS 174

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
               QK  V IG+G+TEK+GG+D+   T+   K  DG Y + GHK+F S+PM DA ++LA
Sbjct: 175 LPASQKNGVTIGMGMTEKQGGSDVRRNTTTATKQRDGSYSIVGHKFFFSAPMCDAHLILA 234

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q EG + CFL+PR+LE+G  N +  QRLK+K+G+ SNA+ E+EF     +L+G+      
Sbjct: 235 QAEGGLSCFLLPRILENGELNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVP 294

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM  L  LD  I S + MR SL  A+H+   R   G  L++QP+M+  + D+ ++ A
Sbjct: 295 VIIDMVSLTRLDCMIGSSALMRQSLVHALHHVSHRDAFGKTLVNQPLMQNVLTDLTIECA 354

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AATAL+ R+A + D A   S EAA AR+   I KYW CK  P  + EA EC+GG GY+EE
Sbjct: 355 AATALTMRVAKAVDNASRNSYEAALARLATAIGKYWICKRTPMFVNEAQECLGGIGYVEE 414

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI- 486
             + R+YR++P NSI  GSGN   LDVL  L K  N+ E LF+ L+   G +    I + 
Sbjct: 415 NPMPRYYRQAPLNSIWEGSGNVQCLDVLRALAKEPNVKEALFNELKTQTGKNKHYDIHLS 474

Query: 487 -LRDSISLCKEDKGLARFLTEKIALASSAAALYRAG--------MNDIADVFLENRFLDN 537
            L D +S  +  +  +R+LTE++ALA  A  L             NDIA  F E+R  + 
Sbjct: 475 KLLDELSNTQNMETRSRYLTEQMALALQACTLLATCTFLAKGNVHNDIAHTFCESRLGNA 534

Query: 538 CHSTHCMLHGRFNAAHII 555
           C      L        II
Sbjct: 535 CGFALGTLPDTTPFEKII 552


>gi|161936197|ref|YP_153243.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 546

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 10  QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 69

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +  +RAA
Sbjct: 70  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVVRAA 125

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 126 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 186 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 245

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 246 VPRFLPDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTR 305

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA
Sbjct: 306 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLA 365

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 366 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 425 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPD 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 485 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|56130425|gb|AAV79931.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 540

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +  +RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVVRAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|161505123|ref|YP_001572235.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866470|gb|ABX23093.1| hypothetical protein SARI_03257 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 540

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 185/517 (35%), Positives = 281/517 (54%), Gaps = 7/517 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELAR 75
            P  +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R
Sbjct: 1   MPWQTHTVFNQPTPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGR 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN   P+L  Y P G+R D V FHPAWH L++    + +H   W        R  +   
Sbjct: 61  LANAYPPELQRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLSWAED----ARAGSFVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           RAAR  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK 
Sbjct: 117 RAARFVLHAQVEAGALCPVTMTFAATPLLLRMLPATFHDWLAPLRSDRYDSHLLPGGQKR 176

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + IG+G+TEK+GG+D+ + T++  +++DG Y L GHKWF S P SDA ++LAQ +G V 
Sbjct: 177 GLLIGMGMTEKQGGSDVLSNTTRADRLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGGVS 236

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M  
Sbjct: 237 CFFVPRFLPDGQRNAVRLERLKDKLGNRSNASAEVEFQDAVGWLLGEEGEGIRHILKMGG 296

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   D A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL F
Sbjct: 297 MTRFDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLF 356

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++++ +S ++EA +AR++ P  K+  CK     +AEAME +GG GY EE  + R Y
Sbjct: 357 RLARAWEQ-RSEAKEALWARLLTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLY 415

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L 
Sbjct: 416 REMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLGEVFAEVKGQDRHYDRAVRQLQQRLR 475

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           K D+ + R +T+++ L    A + R     +A  + +
Sbjct: 476 KPDEVMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|161486769|ref|NP_808015.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 546

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 182/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 10  QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 69

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 70  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 125

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 126 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 186 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 245

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 246 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 305

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI+YA +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 306 LDCALGSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 365

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 366 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 425 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 485 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|226943070|ref|YP_002798143.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226717997|gb|ACO77168.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 571

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 199/560 (35%), Positives = 293/560 (52%), Gaps = 14/560 (2%)

Query: 4   REIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLG 62
            +   R A+  +HQ +++    NQ P   G N Y  D  L   +  +      + L+  G
Sbjct: 14  EQASSRSAVMDLHQYAETHEVTNQVPPLDGANLYRIDRPLQEWLRRYDGGWAERRLDDYG 73

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                         AN N P L ++   G R D+V+FHPA+H L+R +I  GL    W  
Sbjct: 74  ALAGGP-LLAAGFAANENRPLLRSHDRYGHRIDQVDFHPAYHELMRAAIAHGLPVLPWRE 132

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                 R  A   RA  +YL  Q+EAG     ++T AS+ AL   P + + W P++ + E
Sbjct: 133 P-----RPGAQVARAGLMYLHNQVEAGTACPLTMTFASVAALRRQPEIAESWLPRVLAGE 187

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSP 238
           YDP N    +K    +G+ +TEK+GGTD+ A +++   +        Y L GHKWF S+P
Sbjct: 188 YDPRNLPVERKGGATLGMAMTEKQGGTDVRANSTRAWPVGAAGPGQAYELLGHKWFCSAP 247

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           MSDAF+ LA  +G + CFL+PR   DG  N    QRLKNK+GN SNA+ E+E+     ++
Sbjct: 248 MSDAFLTLAWSDGGLSCFLLPRHRPDGRRNEFYIQRLKNKLGNWSNASAEVEYRGALAWM 307

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + +M  L   D  I S + MR +L +A+H+   R V G +L +  +M+  
Sbjct: 308 IGEEGRGVPTILEMVGLTRFDCMIGSSALMRQALTQALHHCAHRLVGGQVLSEHALMQNV 367

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+AL+  AA AL+ RLA + D A+  S E + AR++  I KYW CK AP +I EA EC
Sbjct: 368 LADLALESEAALALTLRLARALDHAEDES-ERSLARLLTAIGKYWICKRAPEMIGEAAEC 426

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +GG+GY+EE  + R YRE+P NSI  GSGN   LDVL +L K     E LF  L+   G 
Sbjct: 427 LGGAGYVEESILPRLYREAPVNSIWEGSGNVQCLDVLRVLGKEPEALEVLFDELDGGHGD 486

Query: 479 SG-KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
           +  K  I  LR +++   E    AR L E++A+   A  L  AG   ++D F+ +R  + 
Sbjct: 487 ARLKARIEWLRKALADRTEIHYCARRLVEELAVTLQAGLLLEAGNAAVSDAFIHSRLGEG 546

Query: 538 CHSTHCMLHGRFNAAHIIDS 557
               +  L    + A ++  
Sbjct: 547 -GRVYGTLPRGLDVAGLLAR 565


>gi|290956476|ref|YP_003487658.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260646002|emb|CBG69093.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 532

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 195/535 (36%), Positives = 289/535 (54%), Gaps = 17/535 (3%)

Query: 33  GMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
             + +++D +L   +A   +        +EL   G    S   QE  R+AN N P+L AY
Sbjct: 2   DYDVFAADKVLDEAVARHLAPEVRDEAREELSGFGRTSGSAQVQEWGRLANENPPKLRAY 61

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G R D+VEFHP+WH LL + +  GL  +          R   H  RAA   +  Q+E
Sbjct: 62  DRYGNRVDEVEFHPSWHRLLGKGVSAGLTAA--------WTRPGGHVRRAAAFVVWTQVE 113

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG+    S+T A++ AL T P +  +W P++ S  YD   +   QK     G+G+TEK+G
Sbjct: 114 AGNGCPLSMTHAAVPALRTDPALAAEWEPRLTSLLYDRDMRPAAQKAGALFGMGMTEKQG 173

Query: 208 GTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ A  +  +    DG Y L+GHKWF S+PMSD F++LAQ  G + CFLVPR+L DGS
Sbjct: 174 GSDVRANATAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVPRVLADGS 233

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N    QRLK K+GNRSNA+ E+EF  T+   +GD       +  M     LD A+ + S
Sbjct: 234 RNVFRIQRLKEKLGNRSNASAEVEFDGTWARRVGDEGRGVRTIIGMVAATRLDCALGAAS 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            MR ++A+A+H+   R   GG LID+P+M+  +AD+AL+  AAT L+ R+A ++D A++ 
Sbjct: 294 LMRQAVAQAVHHCTYREAFGGPLIDKPLMRNVLADLALESEAATVLAMRVAAAYDAAEAG 353

Query: 387 SE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +E E A+ R+  P+ KYW  K    ++AEA EC+GG+GY+EE  + R  RESP NS+  G
Sbjct: 354 AENERAFLRLAVPVAKYWVTKRCTPLVAEAAECLGGNGYVEESGMPRLLRESPLNSVWEG 413

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARF 503
           +GN   LDVL  L++     +     +    G+  +    I  L   ++  +  +  AR 
Sbjct: 414 AGNVQALDVLRALQREPGALDACLREVGAARGADHRLDGAIKDLLTELADLEGVEARARR 473

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           L E++AL    A L R     +AD F  +R   +  S    L    + A I++  
Sbjct: 474 LVERLALVLQGALLVRYAPPAVADAFCASRLGGDRGSAFGTLPHTLDLASIVERA 528


>gi|29140312|gb|AAO71875.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 540

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 182/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI+YA +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|161353573|ref|NP_463238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267996709|gb|ACY91594.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323132714|gb|ADX20144.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 546

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 10  QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 69

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 70  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 125

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 126 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 186 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 245

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 246 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTR 305

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA
Sbjct: 306 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLA 365

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK+    +AEAME +GG GY EE  + R YRE 
Sbjct: 366 RAWEQ-RREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 425 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 485 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|167994994|ref|ZP_02576084.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|16422938|gb|AAL23197.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205327231|gb|EDZ13995.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261249467|emb|CBG27332.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301160864|emb|CBW20396.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915475|dbj|BAJ39449.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|332991188|gb|AEF10171.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 540

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK+    +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|254393001|ref|ZP_05008165.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706652|gb|EDY52464.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 552

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/548 (35%), Positives = 284/548 (51%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D  L   +         +V   EL  LG    S  AQE 
Sbjct: 11  ASTHTVTNQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEW 70

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN   P+L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H
Sbjct: 71  GALANEYPPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL--------TDAWGRPSGH 122

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K
Sbjct: 123 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASK 182

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                G+G+TEK+GG+D+ A T+    ++  G Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 183 PGNLFGMGMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGG 242

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 243 LTCFLVPRVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEM 302

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL
Sbjct: 303 VAATRLDCVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATAL 362

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RLA ++D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R
Sbjct: 363 GIRLAAAYDAG--TEAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++           +    G+  +    I  L   
Sbjct: 421 LLREAPLNSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTE 480

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +  +    L     
Sbjct: 481 LADLDGIEARARRLVERMALVLQGSLLVRYAPPEVADAFCASRLGGDRGAAFGTLPHTLA 540

Query: 551 AAHIIDSL 558
              +++  
Sbjct: 541 LRAVVERA 548


>gi|186477672|ref|YP_001859142.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194131|gb|ACC72096.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 557

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 202/555 (36%), Positives = 296/555 (53%), Gaps = 18/555 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARM 76
           P  +    NQ P     N ++SD+ L A +    +  H+E L   G  + +     LA +
Sbjct: 6   PGITHEVSNQAPPLANYNLFTSDAALAAAVEREGAAWHREALTRDGAALTTPEILALAEL 65

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +TP+L A+ P GER D +EFHPAWH LL     +GLH   +        +  A   R
Sbjct: 66  ANRHTPELAAFSPRGERIDALEFHPAWHTLLGLLRREGLHALPFSDP-----QPGAMVAR 120

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A  +L AQLE+G L   ++T AS+  L   P +      K++SRE+DP +    QKTS+
Sbjct: 121 CAGYFLHAQLESGSLCPVTMTFASIPVLQREPGLFATLRDKLYSREHDPRDLPLEQKTSM 180

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
            IG+G+TEK+GG+D+ +  +Q    S       Y L GHKWF S+P  DA ++LA+    
Sbjct: 181 MIGMGMTEKQGGSDVRSNRTQAFAASGSGRGAGYRLVGHKWFFSAPQCDAHLVLARTGDH 240

Query: 253 VG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD       + 
Sbjct: 241 EGLSCFFVPRFAPDGSKNAVRIQRLKDKLGNRSNASSEVEFFDAWGIMIGDEGRGVPTII 300

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+  AAT
Sbjct: 301 EMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGKHLADQPLMRNVLADLALESEAAT 360

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  RLA +F++  +  EE A+ R++ P  KYW CK       EAME  GG+GY+EE  +
Sbjct: 361 VLFMRLARAFEDMTNAPEERAWRRLVTPAAKYWVCKRTLEFTGEAMEVWGGNGYVEEGPM 420

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITIL 487
           AR YRE+P NSI  GSGN M LDVL  +E+     + L +       +       +  + 
Sbjct: 421 ARFYREAPVNSIWEGSGNVMCLDVLRAMEREPGAAQALLAAWRAHAQAHPALNAALDRLT 480

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCM 544
             S S  +  +  AR + ++I L + A  L +   + +AD ++  R  + C  +   +  
Sbjct: 481 AASTSAPETREVSARRIAQQIVLIAQAVLLVQHAPSFVADAYIATRLGEGCGESGRVYGT 540

Query: 545 LHGRFNAAHIIDSLY 559
           L   F+ A I +  +
Sbjct: 541 LPAAFDHAAIANRAF 555


>gi|294815734|ref|ZP_06774377.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328333|gb|EFG09976.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
          Length = 544

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/548 (35%), Positives = 284/548 (51%), Gaps = 18/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQEL 73
           + +    NQ P  +G + +++D  L   +         +V   EL  LG    S  AQE 
Sbjct: 3   ASTHTVTNQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEW 62

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN   P+L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H
Sbjct: 63  GALANEYPPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL--------TDAWGRPSGH 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K
Sbjct: 115 VRRAAGFLVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASK 174

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                G+G+TEK+GG+D+ A T+    ++  G Y L+GHKWF S+PMSD F++LAQ  G 
Sbjct: 175 PGNLFGMGMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M
Sbjct: 235 LTCFLVPRVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL
Sbjct: 295 VAATRLDCVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RLA ++D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R
Sbjct: 355 GIRLAAAYDAG--TEAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
             RE+P NSI  GSGN   LDVL  L++           +    G+  +    I  L   
Sbjct: 413 LLREAPLNSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTE 472

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           ++     +  AR L E++AL    + L R    ++AD F  +R   +  +    L     
Sbjct: 473 LADLDGIEARARRLVERMALVLQGSLLVRYAPPEVADAFCASRLGGDRGAAFGTLPHTLA 532

Query: 551 AAHIIDSL 558
              +++  
Sbjct: 533 LRAVVERA 540


>gi|167579430|ref|ZP_02372304.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 559

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/556 (35%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +  A  LA +A
Sbjct: 7   TATHRVTNQVPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDALALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL     +GLH   +        +  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEP-----QPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL AQLE+G L   ++T AS+  L   P +      K++SRE+D  +    QK S+ 
Sbjct: 122 AGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +G+G+TEK+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+  G  
Sbjct: 182 VGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHA 241

Query: 254 G--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATA
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATA 361

Query: 372 LSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F+E  S    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M LDVL  +E+  +    L           +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF +          
Sbjct: 482 THLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +I+  +
Sbjct: 542 TLPATIDHAALIERAF 557


>gi|167553775|ref|ZP_02347521.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205321868|gb|EDZ09707.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 540

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|317508795|ref|ZP_07966440.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316252904|gb|EFV12329.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 563

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/557 (33%), Positives = 288/557 (51%), Gaps = 18/557 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            +    NQ P  +G +      L   L          E++ LGE   S  AQ+   +A  
Sbjct: 3   QTHTVFNQVPPLVGWSLADHPVLAETLQRENAHAARAEIQSLGELAGSAEAQQWGDLAEA 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-------- 131
           + PQL  Y   G R D+V + P++H L++ ++  GLH + W  S       +        
Sbjct: 63  HPPQLKNYDRYGNRIDEVVYDPSYHQLMKVAVEYGLHGAAWAESGHSPSATETQHSPSAT 122

Query: 132 -----AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH  RAA++ +  Q +AGHL   S+T A + AL   P V     PK+ SR YDP+
Sbjct: 123 ETQHCAHLARAAKMIVWGQADAGHLCPISMTYAVVPALRANPAVAAAHEPKLASRVYDPS 182

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            +   QK  +  G+ +TEK+GG+D+ A T+      DG Y ++GHKWF S+PMSD  ++L
Sbjct: 183 LRPIAQKAGLIAGMSMTEKQGGSDVRANTTSAVPQPDGSYRITGHKWFTSAPMSDLLLVL 242

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF +PR+L DGS N +  QRLK+K+GN+SNA+ E+E+    G+L+G+     
Sbjct: 243 AQAPGGLSCFYLPRILPDGSRNNMSVQRLKDKLGNKSNASSEVEYDEAVGWLVGEEGKGV 302

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M  +  LD  + + + M ++ A A H+A  R   G  L+DQP+M+  +AD+A++ 
Sbjct: 303 KTIVEMVNMTRLDCTLATSTAMSLATAHAAHHATYRSAFGANLVDQPLMRNVLADLAVEA 362

Query: 367 AAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
            A+   +  LA   D+A +  E+A A  RI   ++KY+ CK  P  +AEA+EC+GG+GY 
Sbjct: 363 EASLTTALWLAAHVDKATAGDEQAKALLRISLAVSKYFICKRGPVHVAEALECLGGNGYT 422

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-- 483
           EE  + R YRE P  SI  GSGN   LD L  + K       LF+  +   G+  +    
Sbjct: 423 EESRMPRFYREVPLLSIWEGSGNVAALDALRAMAKQPESVALLFAEFDAARGADTRFDSS 482

Query: 484 ITILRDSIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS-T 541
           +  L+D ++   +  +  AR +   +ALA   + L R G   +AD F  +RF  +    T
Sbjct: 483 VAALKDELAGGFEAIEHRARRIVGGLALALQGSLLIRHGHPAVADAFAASRFSQDGFGWT 542

Query: 542 HCMLHGRFNAAHIIDSL 558
              L    + A I++  
Sbjct: 543 FGALPTGVDLAPILERA 559


>gi|198244552|ref|YP_002218260.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939068|gb|ACH76401.1| protein AidB [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
          Length = 540

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|197249522|ref|YP_002149291.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197213225|gb|ACH50622.1| protein AidB [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
          Length = 540

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|254475449|ref|ZP_05088835.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214029692|gb|EEB70527.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 550

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/542 (34%), Positives = 280/542 (51%), Gaps = 10/542 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    N PP     + +S D +L   ++    +    +L   G+        E A  AN 
Sbjct: 12  THEVANTPPHLGDQDLWSQDIVLQEGVLREGAAGSVAKLAQFGKDAGRAEVMEQADEANR 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L A+   G R ++V FHP++HAL   ++ +GL    W           AH   AA 
Sbjct: 72  HAPELQAFDRYGMRINEVRFHPSYHALQDLAVSNGLSNHAWCNP-----GPGAHVTHAAL 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            Y++ Q+E G +   +++ A++ AL TTP V +DW   + S+ YD  +    +KT + +G
Sbjct: 127 NYMLNQMEGGVMCPLAMSYAAVPALRTTPDVAEDWVHGLLSQRYDRRDIPASEKTGLQMG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A ++Q      G Y L+GHK+F S+PMSDAF+ LA   G + CFLVP
Sbjct: 187 MFMTEKQGGSDVRANSTQAVPDGAG-YRLTGHKFFCSAPMSDAFLTLAYAPGGLSCFLVP 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N    QRLK+K+GNRSNA+ E+E  +T+G L+G        + DM       
Sbjct: 246 RFTPDGARNRFYLQRLKDKLGNRSNASSEMELQDTWGTLVGPEGRGVRTIIDMVQGTRFY 305

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S + MR  L +A+H+ R R      LIDQP+M+  +AD+AL+  AA  LS RL  +
Sbjct: 306 CAFGSAALMRQGLLQAVHHTRHRAAFQRRLIDQPLMQNVLADLALETEAALTLSLRLGRA 365

Query: 380 FDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            DEA++  +     ARI   I K+W CK A    AE MEC GG GYIEE  + R YRE+P
Sbjct: 366 IDEAEAGDARAGKLARIGTAIAKFWICKRAIQHAAETMECHGGPGYIEESPMPRLYREAP 425

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKE 496
            NSI  GSGN + LDVL  L K     E     L    G +    + +  L+  +     
Sbjct: 426 VNSIWEGSGNVICLDVLRALHKDAETGEVFLKELAPARGGNRDFDQALARLQQDLPSMVA 485

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           D   AR L+E++A+   A+ L R   + ++D F  +R           L G   +  ++D
Sbjct: 486 DPTSARHLSEQMAVLWQASLLIRHAPSLVSDAFCSSRLGSRWSGVFGTLRGDAVSRALVD 545

Query: 557 SL 558
            +
Sbjct: 546 RV 547


>gi|167835047|ref|ZP_02461930.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 559

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/561 (35%), Positives = 294/561 (52%), Gaps = 20/561 (3%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQE 72
           Q +  + +    NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  
Sbjct: 2   QQNLMTATHRVTNQAPPLSDYNAFETDAALVDAVRRYDASWHQTALSRDGAALTTPDALA 61

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA +AN + P+L  + P GER D +EFHP+WH LL     +GLH   +        +  A
Sbjct: 62  LAELANRHAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEP-----QPGA 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              R A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    Q
Sbjct: 117 MAARCAGYFLHAQLESGSLCPLTMTFASIPVLQHEPALFATLRDKLYAREHDARDVPLPQ 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K S+ +G+G+TEK+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+
Sbjct: 177 KRSMMVGMGMTEKQGGSDVRSNETHAYPLGAAGRGQAYRLVGHKWFFSAPQCDAHLVLAR 236

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
             GR G  CF VPR   DG  N +  QRLK+K+GNRSNA+ E+EF N +G ++GD     
Sbjct: 237 TSGRAGISCFYVPRFSPDGGKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGV 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD  I S + MR +L +AIH+AR R   G +L +QP+M+  +AD+AL+ 
Sbjct: 297 PTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLALES 356

Query: 367 AAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            AATAL  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY
Sbjct: 357 EAATALFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKK 482
           +E   +AR YRE+P NSI  GSGN M LDVL  +E+  +    LF          +    
Sbjct: 417 VETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALFDEWRDAARYSAPLAD 476

Query: 483 VITILRDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC--- 538
            +  L   +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF +     
Sbjct: 477 ALAELTRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPAAVAQAFVATRFGNASSET 536

Query: 539 HSTHCMLHGRFNAAHIIDSLY 559
                 L    + A +I+  +
Sbjct: 537 GRVFGTLPATIDHAALIERAF 557


>gi|238910535|ref|ZP_04654372.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|213859959|ref|ZP_03385663.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 182/514 (35%), Positives = 281/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++AR+R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHARQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|161617648|ref|YP_001591613.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161367012|gb|ABX70780.1| hypothetical protein SPAB_05511 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|168822494|ref|ZP_02834494.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205341093|gb|EDZ27857.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320088803|emb|CBY98561.1| Protein aidB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLNEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|194442803|ref|YP_002043631.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194401466|gb|ACF61688.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       V  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHVLKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|328543470|ref|YP_004303579.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413214|gb|ADZ70277.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 542

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 229/543 (42%), Positives = 321/543 (59%), Gaps = 7/543 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARM 76
           P ++    NQPP + G N  +SD LL+A   A         L   G  + S    +L R+
Sbjct: 3   PFETHEVFNQPPRYGGGNLATSDPLLIAAHGAALDEATGAALAAHGAALGSLDVLDLGRL 62

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+ + P L  +   G R+D VE+HPA+HAL+RRS+  GLH +  D    P  R      R
Sbjct: 63  ADEHAPVLKTHDIHGRRFDVVEYHPAYHALMRRSVEAGLHAASLDDGPWPQTR------R 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A R ++ +Q E GH    ++T+A+   L    +  + W P + SR YD       QK  V
Sbjct: 117 AGRYFVTSQAETGHCCPITMTNAAGAVLKAHAQPAEGWLPLLRSRHYDQRFVPMAQKRGV 176

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             G+GLTEK+GGTD+ AIT+  +   DG+Y L+GHKWFLS+PMSDAF++LA+ E   GCF
Sbjct: 177 TFGMGLTEKQGGTDLRAITTVAEPSGDGLYVLTGHKWFLSAPMSDAFLVLAKTERGPGCF 236

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR L DG+ NGL +QRLK K+GNRSNA+ E+EF +  G L+G+       + DM +  
Sbjct: 237 LVPRFLPDGTVNGLRFQRLKAKLGNRSNASTEVEFQHAGGLLIGEEGRGIATILDMVVPT 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +D A+ S + MR ++A A+H+ R R   G  L+DQP+M R +AD+ALD+AAATAL+FRL
Sbjct: 297 RIDCALGSAAQMRAAVARAVHHCRHRQAFGARLVDQPLMTRVLADMALDVAAATALAFRL 356

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + D     + EAAY R+M P  KYW CK AP +  EAMEC+GG+GY+E+  +AR YR+
Sbjct: 357 VRAADCMADDAAEAAYVRLMTPAIKYWICKAAPLLTYEAMECLGGNGYVEDFDMARLYRD 416

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P N+I  GSGN M LDVL  LE+     E + +     LG  G     ++  +    +E
Sbjct: 417 APVNAIWEGSGNVMALDVLRALERTPAALEAVLAEFAGRLGRGGAAAGEVIAAAARAARE 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           D    R LTE++AL  +AAAL       +AD F+E+R      S++ ML GR NA  +++
Sbjct: 477 DPSNGRILTEQLALTGAAAALRAIAPEPVADAFIESRLAGQWRSSYGMLPGRHNARRLVE 536

Query: 557 SLY 559
           +LY
Sbjct: 537 ALY 539


>gi|168231415|ref|ZP_02656473.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194471657|ref|ZP_03077641.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194458021|gb|EDX46860.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205334317|gb|EDZ21081.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 540

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 277/514 (53%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  +++ D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLEDDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AE ME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEVMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|83718514|ref|YP_440751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167617528|ref|ZP_02386159.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
 gi|257140600|ref|ZP_05588862.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83652339|gb|ABC36402.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 559

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 196/556 (35%), Positives = 290/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL     +GLH   +        +  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEP-----QPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL AQLE+G L   ++T AS+  L   P +      K++SRE+D  +    QK S+ 
Sbjct: 122 AGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +G+G+TEK+GG+D+ +  +    +        Y L GHKWF S+P  DA ++LA+  G  
Sbjct: 182 VGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHA 241

Query: 254 G--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATA
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATA 361

Query: 372 LSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F+E  S    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M LDVL  +E+  +    L           +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF +          
Sbjct: 482 THLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +I+  +
Sbjct: 542 TLPATIDHAALIERAF 557


>gi|161501903|ref|NP_458811.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
          Length = 546

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 10  QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 69

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 70  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 125

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 126 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 186 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 245

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 246 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 305

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 306 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 365

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 366 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 425 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 485 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|207859522|ref|YP_002246173.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206711325|emb|CAR35703.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 540

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|168263270|ref|ZP_02685243.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|205347910|gb|EDZ34541.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 540

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|213428656|ref|ZP_03361406.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213612677|ref|ZP_03370503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|289829967|ref|ZP_06547418.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25513441|pir||AI1050 probable acyl Co-A dehydrogenase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16505502|emb|CAD06854.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi]
          Length = 540

 Score =  462 bits (1188), Expect = e-127,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|218551457|ref|YP_002385249.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469]
 gi|218358999|emb|CAQ91659.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469]
          Length = 547

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/533 (34%), Positives = 278/533 (52%), Gaps = 9/533 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLS 67
            +  + VH    +    NQP      N Y SDS L   +    +    EL   +G+ + +
Sbjct: 1   MMEGDIVHWQ--THTIFNQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV-HKDWAPKIFSREYDPT 186
            R  +  +RAAR  + AQ+EAG L   ++T A+   L+       +DW   + S  YD  
Sbjct: 115 ARVGSFVVRAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ +G + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+     
Sbjct: 235 AQTKGGLSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGV 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +
Sbjct: 295 RYILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              T+L FRLA ++D  ++  +E  +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTSLLFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGIPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           +  + R YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G        +
Sbjct: 414 DSELPRLYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAV 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            R    L K  +   R +T ++ +    A + R     IA+ + +        
Sbjct: 474 RRFQQLLRKPSEEQGREITLQLFILGCGAQMLRHASPPIAENWCQLMLGHRRG 526


>gi|168245165|ref|ZP_02670097.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194448363|ref|YP_002048419.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194406667|gb|ACF66886.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205336072|gb|EDZ22836.1| protein AidB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 540

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 278/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LIDQP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEECELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL  L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRGLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|204926971|ref|ZP_03218173.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204323636|gb|EDZ08831.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 540

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 278/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLSSIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDLQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|325499722|gb|EGC97581.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ECD227]
          Length = 541

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 182/527 (34%), Positives = 275/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SDS L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQ--THTIFNQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 59  GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV-HKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  + AQ+EAG L   ++T A+   L+       +DW   + S  YD       Q
Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +   T+L
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++  +E  +AR+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 355 LFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G        + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAVRRFQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  +   R +T ++ +    A + R     IA+ + +        
Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAENWCQLMLGHRRG 520


>gi|167561138|ref|ZP_02354054.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 559

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 202/556 (36%), Positives = 299/556 (53%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  LA +A
Sbjct: 7   TATHRVTNQAPPLHDYNAFETDAALVGAVERYDASWHQTALARDGAALTTLDALALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL     +GLH   +        R  A   R 
Sbjct: 67  NRHAPELSTHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFSDP-----RPGAMVARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P + +    K++SRE+D  +    +K S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPSLFETLREKLYSREHDARDAPLPEKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +G+G+TEK+GG+D+ +  +Q   +  G     Y L GHKWF S+P  DA ++LA+  G  
Sbjct: 182 VGMGMTEKQGGSDVRSNETQAYPLGAGGRGESYRLVGHKWFFSAPQCDAHLVLARTAGHA 241

Query: 254 G--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           G   F VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISSFYVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATA
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATA 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITIL 487
           +AR YRE+P NSI  GSGN M LDVL  +E+  +    LF+        S      +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  ++ +  AR + ++IAL + A+ L R G   +A+ F+  RF D        + 
Sbjct: 482 TRLLSLEPEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L   F+ A +I+  +
Sbjct: 542 TLPATFDHAALIERAF 557


>gi|134283582|ref|ZP_01770281.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|134244991|gb|EBA45086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 559

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALAELA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPFTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|324112216|gb|EGC06194.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia
           fergusonii B253]
          Length = 541

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 182/527 (34%), Positives = 276/527 (52%), Gaps = 9/527 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SDS L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQ--THTIFNQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN   P+L  Y   G R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 59  GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV-HKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  + AQ+EAG L   ++T A+   L+       +DW   + S  YD       Q
Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFLPRFLPDGQRNAIHLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +   D A+ S + MR + + AI++A +R V G  LI+QP+M+  +  +AL +   T+L
Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  ++  +EA + R+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 355 LFRLARAWDR-RTDEKEALWTRLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   +++ L     Q  G +      + R    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQNRHFDRAVRRFQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           L K  +   R +T ++ +    A + R     IA+ + +        
Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAENWCQLMLGHRRG 520


>gi|217424949|ref|ZP_03456445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|217391969|gb|EEC31995.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 559

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|330818629|ref|YP_004362334.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
 gi|327371022|gb|AEA62378.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
          Length = 557

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 197/562 (35%), Positives = 299/562 (53%), Gaps = 21/562 (3%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70
           M+Q H P  +    NQ P     NA+ +D  L A +    +  H+  L   G  + +   
Sbjct: 1   MDQ-HVPVATHRVTNQAPPLTDYNAFETDLALAAAVERHGAGWHQTALSRHGAALTTADT 59

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             LA +AN +TP+L  +   GER D +EFHP+WH LL     +GLH   +        R 
Sbjct: 60  LALAELANRHTPELSTHSARGERIDALEFHPSWHQLLALLRGEGLHALPFAEP-----RA 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A   R A  +L AQLE+G L   ++T AS+  L   P +      ++++RE+DP +   
Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLKKEPALFDTLRERLYTREHDPRDIPL 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIML 246
             K S+ IG+G+TEK+GG+D+ +  ++   +  G     Y L GHKWF S+P  DA ++L
Sbjct: 175 AGKRSMMIGMGMTEKQGGSDVRSNETRAWPLGAGGRGQPYRLVGHKWFFSAPQCDAHLVL 234

Query: 247 AQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+ +    + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++G+   
Sbjct: 235 ARTDEHAGISCFYVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLDAYGVMVGEEGR 294

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M  +  LD  I S + MR +L +AIH+AR R   G +L +QP+M+  +AD+A+
Sbjct: 295 GVPTIIEMANMTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLAI 354

Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AAT L  RLA++ +     S EA  + RI+ P  K+W CK A     EAME  GG+G
Sbjct: 355 ESEAATMLFMRLADAVEHDDGSSAEARGWRRIVTPAAKFWVCKRAIEFTGEAMEVWGGNG 414

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-- 481
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+       L +   +      +  
Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAVERQPESAAALVAAWREAAAGHPELL 474

Query: 482 KVITILRDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           + I  L D+ +L  +E +  AR + ++IAL + A+ L R     +AD F+  R     H 
Sbjct: 475 RAIDQLLDAFALPAEEREASARRIAQRIALIAQASLLIRHAPAAMADAFIATRLGAASHD 534

Query: 541 T---HCMLHGRFNAAHIIDSLY 559
           T   +  L   F+   ++   +
Sbjct: 535 TGRVYGTLPA-FDHGALLARAF 555


>gi|322615539|gb|EFY12459.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618599|gb|EFY15488.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322621988|gb|EFY18838.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627712|gb|EFY24503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631019|gb|EFY27783.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637762|gb|EFY34463.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642426|gb|EFY39030.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644005|gb|EFY40553.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650919|gb|EFY47304.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653563|gb|EFY49891.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659748|gb|EFY55991.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662041|gb|EFY58257.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666210|gb|EFY62388.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672630|gb|EFY68741.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676060|gb|EFY72131.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680544|gb|EFY76582.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684562|gb|EFY80566.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192877|gb|EFZ78103.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197247|gb|EFZ82387.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201636|gb|EFZ86700.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206150|gb|EFZ91112.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213158|gb|EFZ97960.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215532|gb|EGA00276.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219517|gb|EGA04002.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323227820|gb|EGA11974.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228990|gb|EGA13119.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236398|gb|EGA20474.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238697|gb|EGA22749.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323241852|gb|EGA25881.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247999|gb|EGA31936.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254670|gb|EGA38481.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258271|gb|EGA41948.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263583|gb|EGA47104.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265821|gb|EGA49317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270265|gb|EGA53713.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 540

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKTLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|224826360|ref|ZP_03699462.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601461|gb|EEG07642.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 541

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 201/545 (36%), Positives = 281/545 (51%), Gaps = 10/545 (1%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSVVHKELELLGEYVLSCTAQELAR 75
            P  +   LNQPP  +  N +SSD  L   ++    +   + L   G  +    + EL R
Sbjct: 1   MPPSAREVLNQPPPLVDYNLFSSDVALQEGVVREGAAWAREPLFDCGALLGRRDSFELGR 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN   P LH +   G R D+VEFHPAWH L+R  +  GLHC+ W+       R  AH  
Sbjct: 61  LANRYPPLLHGFDAQGFRLDEVEFHPAWHTLMRGIVERGLHCAPWEEP-----RPGAHVA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA   L AQ+EAG L   ++T  ++  L     +  DW P + S +YD  +    QK  
Sbjct: 116 RAAAFLLQAQVEAGTLCPTTMTFGAIPVLSQHAGLTLDWLPTLCSHDYDERDLPLAQKHG 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
             +G+G+TEK+GG+D+   T++ +  +DG Y LSGHKWF S P SDA ++LAQ  G + C
Sbjct: 176 GLVGMGMTEKQGGSDVRTNTTRAEPCADGSYRLSGHKWFFSVPQSDAHLVLAQAPGGLSC 235

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F +PR L DG+ N +C  RLK+K+GNRSNA+ E EF   +  LLG+       + +M   
Sbjct: 236 FFLPRWLPDGTRNAVCLLRLKDKLGNRSNASAEAEFDAAYAVLLGEEGRGVPLILEMGGH 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              D  + S   MR  LA+A+H+ R R   G  LI+QP+M   +AD+AL+  AA AL+ R
Sbjct: 296 TRFDCLLGSAGMMRQVLAQAVHHCRHRRAFGHRLIEQPLMLNVLADMALETEAAIALALR 355

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA + D       E    R++ P  KYW CK  P + AEAME +GG+GY+ E   AR Y 
Sbjct: 356 LARAADAPDDEG-EMLLRRLLVPAGKYWVCKRGPELAAEAMEVLGGNGYMAESVAARAYA 414

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E P NSI  GSGN M LDVL  L K     + L + L Q  G     +  +  L D +  
Sbjct: 415 EMPVNSIWEGSGNVMCLDVLRTLAKHPRARDMLLAELAQVPGCHPLYRHALGRLSDQLQR 474

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
               +  AR L  ++ L   A  L R     +A+ F  +R  ++   +   L      A 
Sbjct: 475 P-VAEADARHLVRRMVLLVQAGLLLRHAPEALAEAFCASRLGEDWGGSFGSLPSTLALAP 533

Query: 554 IIDSL 558
           I+   
Sbjct: 534 IVRRA 538


>gi|168464739|ref|ZP_02698642.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195632759|gb|EDX51213.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 540

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGGGAEMLRHASPPLAQAWCQ 512


>gi|318061297|ref|ZP_07980018.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318080613|ref|ZP_07987945.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 533

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/535 (36%), Positives = 278/535 (51%), Gaps = 17/535 (3%)

Query: 33  GMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G + + +D  L   +              EL  LG    S  AQE    AN N P+L  +
Sbjct: 2   GYDVFGADRALSEAVERHLDPALLPGARTELSELGRAAGSAQAQEWGAQANENPPKLRTH 61

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G R D+VEFHPAWH LL  ++  GL  +          R   H  RAA      Q E
Sbjct: 62  DRFGHRIDEVEFHPAWHRLLGHAVSAGLTSA--------WARPGGHVRRAAGFLTWTQAE 113

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AGH    S+T A++ AL   P +  +W P + SR YD   +    K     G+G+TEK+G
Sbjct: 114 AGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFGMGMTEKQG 173

Query: 208 GTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ A T++      DG + L+GHKWF S+P+SD F++L Q  G + CFLVPR+L DG 
Sbjct: 174 GSDVRANTTRAVPLAEDGAFALTGHKWFCSAPVSDGFLVLGQAPGGLSCFLVPRVLADGE 233

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M     LD A+ S +
Sbjct: 234 RNVFAIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVSATRLDCALGSAA 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            MR ++A+AIH+A  R   GG L+ +P+M   +AD+AL+  AAT L+ RLA ++D A + 
Sbjct: 294 LMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAAAYDAAGAG 353

Query: 387 SE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            E E A  R+  P+ KYW  K    V+AEA+EC+GG+GY+EE  + R  RESP NS+  G
Sbjct: 354 DERERALLRLAVPVAKYWVTKRCTPVVAEALECLGGNGYVEESGLPRLLRESPLNSLWEG 413

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARF 503
           SGN   LDVL  L++     +     L    G+  +    +  L   ++  +  +  AR 
Sbjct: 414 SGNVQALDVLRALQREPGALDAFLGELGAARGADHRLDAAVKHLFQELADLEGIEARARR 473

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           L E++AL    + L R    ++AD F  +R   +  +    L      A I+   
Sbjct: 474 LVERMALVLQGSLLVRFAPPEVADAFCASRLGGDWGAAFGTLPHTAPTAAIVARA 528


>gi|168239671|ref|ZP_02664729.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735634|ref|YP_002117317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194711136|gb|ACF90357.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197287665|gb|EDY27056.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 540

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 180/514 (35%), Positives = 278/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AYPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|200388139|ref|ZP_03214751.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199605237|gb|EDZ03782.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 540

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|197264167|ref|ZP_03164241.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197242422|gb|EDY25042.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
          Length = 540

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|162139504|ref|YP_219238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322717323|gb|EFZ08894.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 546

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 10  QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 69

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 70  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 125

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 126 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 186 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 245

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  
Sbjct: 246 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTR 305

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 306 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 365

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 366 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 424

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 425 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 485 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 518


>gi|224586216|ref|YP_002640015.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62130454|gb|AAX68157.1| putative acyl-CoA dehydrogenase; adaptive response (transcription
           activated by Ada) [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224470744|gb|ACN48574.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 540

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 7/514 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+ LG+       +  +  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           + + R +T+++ L    A + R     +A  + +
Sbjct: 479 EAMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512


>gi|115523234|ref|YP_780145.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115517181|gb|ABJ05165.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 563

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 180/550 (32%), Positives = 272/550 (49%), Gaps = 13/550 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +    N        N ++ D++L   +          +L   G    S   +EL  +A
Sbjct: 19  ASTHEVTNVSREMRDYNMFTQDAVLQEAVQREAAGWAEADLTSFGALTGSAGYRELGTLA 78

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L  +   G R D+V FHPA+H L+  +   GLH S W           AH  RA
Sbjct: 79  NRVLPELETHDRFGNRIDQVNFHPAYHQLMAVAYQHGLHSSSWTNP-----GPGAHVARA 133

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  Y+ +Q+EAGH    S+T A++ AL  TP + K + PKI +R+YD  N     K ++ 
Sbjct: 134 AHFYMQSQIEAGHGCPVSMTHAAIPALRATPDLAKMFEPKITARDYDMRNVPDRDKQALV 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GG+D+ + +++   +       +Y L GHK+F+S+PMSD F+ LA     +
Sbjct: 194 IGMAMTEKQGGSDVRSNSTRAFPVGAEGEGQLYELVGHKYFVSAPMSDLFLTLAHTRNGL 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   DG+ N L   RLK K+GN SNA+ E E      +++G        + DM 
Sbjct: 254 TCFLMPRWRPDGTKNPLQVIRLKRKMGNASNASSETELRGALAWMVGPEGKGIRTIIDMV 313

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S +G R++ + AIH+  +R   G  LIDQP+M+  +AD+AL+  A+  L+
Sbjct: 314 AMTRFDCMIGSSAGQRMATSLAIHHCAQRAAFGKQLIDQPLMQNVLADLALEAEASLTLT 373

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D    R EE       A   KYW CK  P    EAMECIGGSG +E+    R 
Sbjct: 374 MRIGRALDNRGDRHEELLMRFGTAA-GKYWICKRTPNHAYEAMECIGGSGVMEDSPFPRL 432

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RESP N+I  GS N   LDVL  L K     +  F+ + +  G + K  + +  L    
Sbjct: 433 FRESPINAIWEGSSNVQCLDVLRALGKQPEGLQVFFAEVAKAKGGNAKLDRWVAELGKEF 492

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           S   + +  +R L +++ALA   A L +     ++D F  +R           L    + 
Sbjct: 493 SDLADLEFRSRALVDRMALALQGALLVQHAPAFVSDAFCASRLDGVGERNLGALPRGVDC 552

Query: 552 AHIIDSLYLD 561
           A I+    +D
Sbjct: 553 AAIVKRAKVD 562


>gi|197105439|ref|YP_002130816.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478859|gb|ACG78387.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 551

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 270/547 (49%), Gaps = 13/547 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +   LNQPP F G N Y  D              +   L  LG  V S    +    AN 
Sbjct: 12  THEVLNQPPEFAGRNLYEIDVAFREAARREAGEWLDAPLSALGAAVGSEQVLDWGEQANR 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  +   G R D+  FHPA+H L+  ++   +H   W        R   H    A 
Sbjct: 72  FPPELVTFDRYGRRVDEARFHPAYHQLMALAMEHRIHDIAWTAE-----RPGGHVGHLAT 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L L  Q EAG +   ++T A++ AL T P V   W  K+    YD   +   QK  + +G
Sbjct: 127 LALFTQAEAGVMCPINMTYAAVPALRTQPDVTGPWLDKLLGGRYDAPLRPIGQKAGITVG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           + +TEK+GG+D+ A T++  ++  G    Y L GHKWF S+PMSD F+ LA  E  + CF
Sbjct: 187 MAMTEKQGGSDVRANTTRAYRLETGDPRAYRLVGHKWFCSAPMSDGFLTLAYAERGLSCF 246

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           LVPR+  DG  NG+   RLK+K+GN+SNA+ E+E+ + +  LLGD       + DM    
Sbjct: 247 LVPRITPDGERNGIRVMRLKDKLGNKSNASSEIEYHDAYAQLLGDEGEGVKVIIDMVHHT 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L +   ++  MR++LA+A++    R      LIDQP M   IAD+A++  AA ALS R+
Sbjct: 307 RLGTMGGTLGIMRMALAQAVNQVSGRRAFQKTLIDQPAMTSVIADLAVEYEAAAALSMRV 366

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +FD         A+AR+   + KYW  K  P  + E MEC GG GY+EE  + R +RE
Sbjct: 367 ARAFDAEDPAGR--AFARLSVAVGKYWLTKRNPNFVYECMECHGGVGYVEETPMPRLFRE 424

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           SP N+I  GSGN + LD+L  L +     E   + + +  G+  +       L D ++  
Sbjct: 425 SPLNAIWEGSGNVIALDILRTLGREPLALEAYAAEVAEARGADRRLDAAAEGLLDGLARH 484

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           +  +  AR   E++AL    A L R     +AD F   R  D    +  +L G  + A I
Sbjct: 485 RPGEADARRTAERMALVLQGALLVRHAPAAVADAFCATRLGDEGGRSFGILPGGADVAAI 544

Query: 555 IDSLYLD 561
           +D    D
Sbjct: 545 VDRQRFD 551


>gi|296157425|ref|ZP_06840260.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295892197|gb|EFG71980.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 561

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 195/561 (34%), Positives = 296/561 (52%), Gaps = 22/561 (3%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELA 74
           H    +    NQ P     N +SSD+ L A +    +  H++ L   G  + +     LA
Sbjct: 4   HSFGQTHEVTNQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTTPETLALA 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN +TP+L  + P GER D +EFH +WH LL     +GLH   +        ++ A  
Sbjct: 64  ELANRHTPELFTHSPRGERIDALEFHASWHTLLSLLRREGLHALPFSDP-----QRGAMV 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  +L AQ+E+G L   ++T AS+  L   P +      K+++RE+DP +     K 
Sbjct: 119 ARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRDIPLTHKN 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           S  IG+G+TEK+GG+D+ +  ++      +     Y L GHKWF S+P  DA ++L + +
Sbjct: 179 SAMIGMGMTEKQGGSDVRSNQTRAYATAGRGRGAAYRLVGHKWFFSAPQCDAHLVLGRTD 238

Query: 251 GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD       
Sbjct: 239 DHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGVPT 298

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+  A
Sbjct: 299 IIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALESEA 358

Query: 369 ATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AT L  RLA +F    D A +   E A+ RI+ P  KYW CK A     EAME  GG+GY
Sbjct: 359 ATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGY 418

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           +E   +AR YRE+P NSI  GSGN M LDVL  +E+  +  + LF+  + +  +      
Sbjct: 419 VETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQALFAGWQMEAQAHPALSA 478

Query: 485 TILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            + + + +L    +  +  AR + +++ L + A  L      ++A+ F+  R  D C  +
Sbjct: 479 ALGKLAAALNGPAEHREASARRIAQQVVLIAQATLLLEHAPGEVAEAFIATRLADGCGES 538

Query: 542 ---HCMLHGRFNAAHIIDSLY 559
              +  L   F+ A I++  +
Sbjct: 539 GRVYGTLPAAFDHAAIVERAF 559


>gi|134094276|ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Herminiimonas arsenicoxydans]
 gi|133738179|emb|CAL61224.1| isovaleryl CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 551

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 188/556 (33%), Positives = 293/556 (52%), Gaps = 18/556 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQEL 73
           +  P  +    NQ P     N Y+SD  L A +         ++L   G  +      +L
Sbjct: 1   MQWP--THEVSNQAPDLHDYNLYTSDLALAAGVQREQAGWHEQDLIRYGAELGMQQTLQL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            ++AN++ P+LH +   G R D VEFHP+WH LL     + LH   W +      R   H
Sbjct: 59  GQLANHHLPELHTHDRFGHRIDTVEFHPSWHQLLAMQRRENLHAMPWSQ-----ARAGVH 113

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             R A  YL AQ+E+G L   ++T A++  L   P +      K+F+RE+DP +    QK
Sbjct: 114 VARTAAYYLQAQVESGSLCPTTMTFAAIPLLQQEPALFAALQAKLFAREHDPRDLPWAQK 173

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            S+ IG+G+TEK+GG+D+ + T+  + +        Y L+GHKWF S+PM DA ++LA+ 
Sbjct: 174 HSMLIGMGMTEKQGGSDVRSNTTVARAVHGSGRGADYALTGHKWFFSAPMCDAHLVLART 233

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CF VPR   DGS N +  Q+LK+K+GNRSN++ E+EF + +G ++G+       +
Sbjct: 234 ENGLSCFFVPRWRPDGSRNAVLIQQLKDKLGNRSNSSSEVEFQDAYGVMVGEEGRGIPTI 293

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     LD  I S   MR +L +AIH+AR R   G  L +QP+M+  ++D+AL+  AA
Sbjct: 294 IEMANHTRLDCVIGSAGLMRNALVQAIHHARHRSAFGHPLAEQPLMRNVLSDLALESEAA 353

Query: 370 TALSFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           T L  RLA + D ++   +   E A+ RI+ P  K+W CK       E ME  GG+GYIE
Sbjct: 354 TLLMLRLARAADASRDAPDDLLERAWRRILTPAAKFWVCKRVLEFSGECMEVWGGNGYIE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVI 484
              +AR +RE+P NSI  GSGN M LDVL  +E+    F  L   L+   G+    + +I
Sbjct: 414 NAPMARMFREAPVNSIWEGSGNVMCLDVLRAIEREAEGFALLLQNLQDSAGTHAGLRALI 473

Query: 485 TILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
             L + ++L  + + + AR   +++ LA+ A+ + +     +A+ F+ +R    C     
Sbjct: 474 ASLHNDLALPPQQQEMQARRFAQRLVLAAQASLMLQHAPASVAEAFIASRIDAECGRVFG 533

Query: 544 MLHGRFNAAHIIDSLY 559
            L        ++   +
Sbjct: 534 TLPATALQYDMLARAW 549


>gi|12744504|gb|AAK06659.1|AF317886_2 putative acyl-CoA dehydrogenase [Burkholderia pseudomallei]
          Length = 554

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 2   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 61

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 62  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 116

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 117 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 177 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 237 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 297 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 356

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 357 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 416

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 417 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 476

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 477 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 536

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 537 TLPATIDHAALVERAF 552


>gi|76808825|ref|YP_331824.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167843843|ref|ZP_02469351.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167909057|ref|ZP_02496148.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|254188119|ref|ZP_04894631.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254258181|ref|ZP_04949235.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|76578278|gb|ABA47753.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157935799|gb|EDO91469.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254216870|gb|EET06254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 559

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTAPDVLALAELA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|167822249|ref|ZP_02453720.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|167892344|ref|ZP_02479746.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167900838|ref|ZP_02488043.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917097|ref|ZP_02504188.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|226199731|ref|ZP_03795282.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254182190|ref|ZP_04888787.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184212728|gb|EDU09771.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|225928082|gb|EEH24118.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 559

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|146310030|ref|YP_001175104.1| isovaleryl CoA dehydrogenase [Enterobacter sp. 638]
 gi|145316906|gb|ABP59053.1| acyl-CoA dehydrogenase domain protein [Enterobacter sp. 638]
          Length = 540

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 191/529 (36%), Positives = 282/529 (53%), Gaps = 11/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +         + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPLPLSNSNLFLSDCALRDAVIREGAEWDIELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   GER D V FHPAWH L++    + +H   W+       R+ + 
Sbjct: 59  GRLANANPPELLRYNAAGERLDDVRFHPAWHLLMQGLCANRVHNLAWED----QARRGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L  + P+   DW   + S  YDP      Q
Sbjct: 115 VARAARFILHAQVEAGTLCPVTMTFAATPLLQQSLPKPFHDWLTPLMSDRYDPHIAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKCSDGSYRLVGHKWFYSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR+L DG  N +  +RLK+K+GNRSNA+ E EF    G++LG+       +  M
Sbjct: 235 LSCFFVPRILPDGQRNAVRLERLKDKLGNRSNASSEAEFMEASGWILGEEGEGVRQILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  +D A+ S   MR +L+ A+++A +R   G  L+DQP+M+  ++ +AL +   TAL
Sbjct: 295 GGLTRVDCALGSHGLMRRALSVALYHAHQRQTFGKNLVDQPLMREVLSRMALQLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D+ +   +E A+AR+  P  KY  CK     +AEAME +GG+GY EE  + R
Sbjct: 355 LFRLARAWDQ-RQDPKETAWARLFTPAAKYSVCKAGIPFVAEAMEVLGGAGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   + + L     Q  G       +  +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPAILDVLQEDFAQVKGQDRHFDRSWRQLQQK 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           L K  +   R +T+ I L  + A + R     +A  +   R + +   +
Sbjct: 474 LRKPQESQGREITQLIFLLGAGAQMLRHASPPVAQAWC--RMMLDARGS 520


>gi|126442217|ref|YP_001057268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126221710|gb|ABN85216.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
          Length = 559

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRTEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|167568357|ref|ZP_02361231.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 559

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/556 (36%), Positives = 300/556 (53%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +  H+  L   G  + +  A  LA +A
Sbjct: 7   TATHRVTNQAPPLHDYNAFETDAALVDAVERYDASWHQTALARDGAALTTLDALALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL     +GLH   +        R  A   R 
Sbjct: 67  NRHAPELSTHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFS-----APRPGAMVARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P + +    K++SRE+D  +    +K S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFETLRGKLYSREHDARDAPLPEKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +G+G+TEK+GG+D+ +  +Q   +  G     Y L GHKWF S+P  DA ++LA+  G  
Sbjct: 182 VGMGMTEKQGGSDVRSNETQAYPLGAGGRGEAYRLVGHKWFFSAPQCDAHLVLARTAGHA 241

Query: 254 G--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           G  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AATA
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATA 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITIL 487
           +AR YRE+P NSI  GSGN M LDVL  +E+  +    LF+        S      +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  ++ +  AR + ++IAL + A+ L R G   +A+ F+  RF D        + 
Sbjct: 482 TRLLSLEPEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L   F+ A +I+  +
Sbjct: 542 TLPATFDHAALIERAF 557


>gi|53717865|ref|YP_106851.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126454819|ref|YP_001064510.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242314916|ref|ZP_04813932.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254295768|ref|ZP_04963225.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|52208279|emb|CAH34211.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126228461|gb|ABN92001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|157805690|gb|EDO82860.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|242138155|gb|EES24557.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 559

 Score =  458 bits (1179), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        +  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----QPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|167736637|ref|ZP_02409411.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
          Length = 559

 Score =  458 bits (1179), Expect = e-126,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLVRLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|254196543|ref|ZP_04902967.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|169653286|gb|EDS85979.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
          Length = 559

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 AISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREAYARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|237810404|ref|YP_002894855.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|237505559|gb|ACQ97877.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 559

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 193/556 (34%), Positives = 291/556 (52%), Gaps = 20/556 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRQYGASWRQTALSHDGAALTTPDVLALAELA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 241

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 242 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 301

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 302 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 361

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 362 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 421

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITIL 487
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF          +     +  L
Sbjct: 422 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAEL 481

Query: 488 RDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHC 543
              +SL  +  +  AR + ++IAL + A+ L R G   +A  F+  RF  +         
Sbjct: 482 TRLLSLEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFG 541

Query: 544 MLHGRFNAAHIIDSLY 559
            L    + A +++  +
Sbjct: 542 TLPATIDHAALVERAF 557


>gi|326444079|ref|ZP_08218813.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
          Length = 537

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/542 (36%), Positives = 282/542 (52%), Gaps = 18/542 (3%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANY 79
            NQ P  +G + +++D  L   +         +V   EL  LG    S  AQE   +AN 
Sbjct: 2   TNQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANE 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  +   G R D+VEFHPAWH LL  ++  GL         +   R   H  RAA 
Sbjct: 62  YPPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL--------TDAWGRPSGHVRRAAG 113

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +  Q EAGH    S+T A++ AL T P +  +W P++ +  YD T   P  K     G
Sbjct: 114 FLVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFG 173

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           +G+TEK+GG+D+ A T+    ++  G Y L+GHKWF S+PMSD F++LAQ  G + CFLV
Sbjct: 174 MGMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLV 233

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+   +G+       + +M     L
Sbjct: 234 PRVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRL 293

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S + MR ++A AIH+   R   GG+LID+P+M+  +AD+AL+  AATAL  RLA 
Sbjct: 294 DCVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAA 353

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++D       E A+ARI  P  KYW  K      AEA+EC+GG+GY+EE  + R  RE+P
Sbjct: 354 AYDAG--TEAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAP 411

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496
            NSI  GSGN   LDVL  L++           +    G+  +    I  L   ++    
Sbjct: 412 LNSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDG 471

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  AR L E++AL    + L R    ++AD F  +R   +  +    L        +++
Sbjct: 472 IEARARRLVERMALVLQGSLLVRYAPPEVADAFCASRLGGDRGAAFGTLPHTLALRAVVE 531

Query: 557 SL 558
             
Sbjct: 532 RA 533


>gi|332525870|ref|ZP_08402011.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109421|gb|EGJ10344.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 550

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/544 (36%), Positives = 285/544 (52%), Gaps = 10/544 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           +++    N        +AY +D+ L  A++    +    EL   G    +   +EL   A
Sbjct: 9   AETHEVFNVGAELPDHDAYRADAALVEAVVREGAAWADDELSAFGRLTGAAAYRELGTEA 68

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  +   G R D V FHPA+H L+R +I  GLH +          R  AH  RA
Sbjct: 69  NRHPPELDTHDRFGRRVDLVRFHPAYHTLMRTAIEHGLHSAP-----HTAPRPGAHVARA 123

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ YL +Q+EAGH    ++T AS+  L TTP + + W P+I +R YDP N    QK  V 
Sbjct: 124 AKFYLQSQVEAGHGCPVTMTFASVPTLRTTPALAEAWLPRITARVYDPRNVPDAQKAGVT 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           IG+ +TEK+GG+D+ A T+Q +     G+Y L GHK+F+S+PM DAF++LAQ  G + CF
Sbjct: 184 IGMAMTEKQGGSDVRANTTQARPAGAGGVYELVGHKYFVSAPMCDAFLVLAQAPGGLSCF 243

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR   DG+ N L   RLK K+GN SNA+ E E      + +GD       + +M    
Sbjct: 244 LLPRWRPDGTKNALQLLRLKRKMGNVSNASSETELRGALAWRVGDEGRGVRTIIEMVACT 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             D  + S +G R + A A+H+A  R   G  L +QP+M+  +AD+AL+  A+ AL+ RL
Sbjct: 304 RFDCMVGSSAGQRAAAALALHHATLRSAFGRRLAEQPLMQNVLADLALESEASLALTMRL 363

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D     + E A  R+   I KYW CK   A  AEAMECIGGSG +E+    R YRE
Sbjct: 364 ARAMDTP-GDAHEQALLRLGTAIGKYWVCKRTAAHAAEAMECIGGSGVMEDSPFPRLYRE 422

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494
           +P N+I  GSGN   LD+L   EK        F+ L    G+  +  + +  L+D  +  
Sbjct: 423 APVNAIWEGSGNVQCLDMLRAAEKAPAALHAFFAELAPARGADRRLDRWVAALQDEFAEL 482

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
            + +  AR L +++ALA  A+ L R     +AD F  +R        +  L    + A I
Sbjct: 483 SDLEFRARGLVDRMALALQASLLVRHAPAAVADAFCASRLDGGGARQYGTLPRGVDVAAI 542

Query: 555 IDSL 558
           +   
Sbjct: 543 VARA 546


>gi|170719826|ref|YP_001747514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169757829|gb|ACA71145.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 559

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 199/557 (35%), Positives = 293/557 (52%), Gaps = 15/557 (2%)

Query: 8   RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66
           + L MN +HQ +++    NQPP   G N Y  D  L      F +      +++ G    
Sbjct: 6   QELPMN-LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDVYGALAG 64

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
                    +AN + P   ++   G R D VEFHPA+H L+R ++  GL    W      
Sbjct: 65  GP-LMAAGFLANTHKPAFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP--- 120

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R  AH  RA+  YL +Q EAG     ++T A++ AL   P + + W PKIF+REYDP 
Sbjct: 121 --RPGAHVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKIFAREYDPR 178

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDA 242
           N     K  V IG+ +TEK+GGTD+ A T++   +       +Y L GHKWF S+PM DA
Sbjct: 179 NVGDQHKAGVTIGMAMTEKQGGTDVRANTTRAYPVGSPGPGQVYELVGHKWFCSAPMCDA 238

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+ LAQ +  + CFL+PR   D S N    QRLKNK+GN SNA+ E+EF     +++G+ 
Sbjct: 239 FLTLAQTDKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMVGEE 298

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+
Sbjct: 299 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQATHHCAHRKVGGRVLSEQPLMQNVLADL 358

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AA ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+
Sbjct: 359 ALESEAALALSLRMGQALEQ-LDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGA 417

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGK 481
           GY+E+  + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G     
Sbjct: 418 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLA 477

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
             I  L+ + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R        
Sbjct: 478 AHIGNLKGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNTSVSDAFIGSRLAGG-GRV 536

Query: 542 HCMLHGRFNAAHIIDSL 558
           +  L    +   ++   
Sbjct: 537 YGALPRGADVQALVARA 553


>gi|284046722|ref|YP_003397062.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950943|gb|ADB53687.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 550

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 186/545 (34%), Positives = 283/545 (51%), Gaps = 19/545 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP   G++ ++++  LV  +          +  ++GE       +     AN 
Sbjct: 12  THAVSNQPPPLEGIDLFTTNRPLVEALEREGGGWARADAVMVGEIAGGDAIR-WGFEANE 70

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +   G R D+VEFHP+WH L++ S+   +H   W        R  AH  R A 
Sbjct: 71  NPPRLKTHDRFGNRVDQVEFHPSWHRLMQTSVEHAIHALPWREE-----RAGAHAARTAL 125

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
               +Q+EAGH    ++T A++ AL   P +   W  ++ S  YD  +    +KT    G
Sbjct: 126 SLTFSQVEAGHGCPITMTFAAVPALRAQPELLDVWEERLTSARYDSRDVPAAEKTGALCG 185

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR-VG 254
           +G+TEK+GG+D+ A T+  + +  G     Y L+GHKWF S+PM D F++LAQ+EG  V 
Sbjct: 186 MGMTEKQGGSDVRANTTVARAVGGGGPGGEYALTGHKWFCSAPMCDLFLVLAQIEGEGVS 245

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N    QRLK+K+GNRSNA+ E+EF+  +G L+G+       + +M  
Sbjct: 246 CFAVPRWRPDGTRNAFHLQRLKDKLGNRSNASSEVEFAGAYGQLVGEPGRGVATIIEMVN 305

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  I S +GMR + A A H+A  R   G +LI+QP+M   +AD+ ++  AAT  + 
Sbjct: 306 HTRLDCVIGSAAGMRWATALATHHAAHRSAFGRLLIEQPLMANVLADLCVESEAATIAAM 365

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++DE     ++  + RI   + KYW CK      AEA+E +GG+GY+EE  + R Y
Sbjct: 366 RLARAYDE-----QDHPFKRIATAVMKYWVCKRNAQHAAEAIEVLGGNGYVEESGMPRLY 420

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492
           RE+P NSI  GSGN M LDVL  L +     +   + L    G+  +    +  LRD ++
Sbjct: 421 REAPLNSIWEGSGNVMCLDVLRALHREEGTRDAFLAELALAGGADPRLDAHVARLRDELA 480

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
              + +  AR L E +ALA   + + R     +A+ F   R   +       L    + A
Sbjct: 481 DPTDAELRARRLVEAMALALQGSLVVRHAPPAVAEAFCAARLAGDHGHAFGTLPPHVDFA 540

Query: 553 HIIDS 557
            I++ 
Sbjct: 541 SIVER 545


>gi|261342843|ref|ZP_05970701.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus
           ATCC 35316]
 gi|288314886|gb|EFC53824.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 540

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 188/529 (35%), Positives = 281/529 (53%), Gaps = 10/529 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPSPLSNSNLFLSDCALRDAVAREGAEWDMDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       RK + 
Sbjct: 59  GRLANVNPPELLRYDAMGGRLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARKGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P+  + W   +    YDP      Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPITMTFAATPLLLQALPKPFESWRNPLLGDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       +  M
Sbjct: 235 LSCFFVPRFLLDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S   MR +L+ A+++A +R   G  LIDQP+M+  ++ +AL +   TAL
Sbjct: 295 GGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMREVLSRMALVLEGQTAL 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D+ ++  +E A+AR+  P  K+  CK     +AEAME +GG+GY E+  + R
Sbjct: 355 LFRLARAWDK-RADPQEMAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGTGYCEDNELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   + + L     Q  G       +  +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLTKQPGMLDLLSDDFAQVKGQDRHFDRSWRQLQQK 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           L K  +   R +  +++L  + + + R     +A  +     LD    T
Sbjct: 474 LRKPQEAQGREIARQLSLLGAGSQMLRHASPPMAQAWCR-MMLDTRGGT 521


>gi|307543996|ref|YP_003896475.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307216020|emb|CBV41290.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 549

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/543 (36%), Positives = 294/543 (54%), Gaps = 12/543 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP     +    D  +  AL    P  V + L  LG  V S   + L   AN 
Sbjct: 12  THEVTNQPPPPEDRDLLEDDLPMREALAREAPDWVAERLAPLGRDVGSEHVRALGEAANR 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  +   G R D V++HPA+H L+  ++  G H   W         +  H+   A 
Sbjct: 72  HPPELRLFDRYGRRLDAVDYHPAYHELMHLAMDHGWHAVAWQEE-----GRGGHQAHVAA 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           LYL+ Q E G     ++T A+M AL  +P +H+ W+P +   +YDP      +KT++  G
Sbjct: 127 LYLLTQAEPGFCCPVTMTHAAMPALRHSPSLHERWSPGLLHWDYDPRALPAERKTALTFG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ A T+Q   ++DG + L+GHKWF S+PMSDAF+ LAQ +  +GCFLVP
Sbjct: 187 MAMTEKQGGSDVRANTTQATPVADG-WRLNGHKWFCSAPMSDAFLTLAQTDDGLGCFLVP 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG  N +  QRLK+K GNR+NA+ E+E+ +T+   LG+       +  M     LD
Sbjct: 246 RFTPDGERNAIELQRLKDKCGNRANASAEIEYRDTWAEPLGEPGRGVATILSMVQQTRLD 305

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A   V+ MR +L+EA  + R RH  G  L +QP+M+  +AD+AL++ A  AL+ R A +
Sbjct: 306 AATAPVAMMRQALSEAWRHVRARHAFGRCLAEQPLMRTLLADMALEVEAGVALTLRTARA 365

Query: 380 FD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           FD  A+  + E A AR++  + KYW  K APA +AEAMEC+GG GY+EE  +AR YRE+P
Sbjct: 366 FDGAARGDAHETALARLLPALAKYWHNKRAPAFLAEAMECLGGIGYVEESPLARLYREAP 425

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCK 495
            NSI  GSGN + LDVL +  +       L   L+   G+S      +  ++    +   
Sbjct: 426 VNSIWEGSGNVICLDVLRVFGRHPEALTALRQELDAARGASSALDTAMQELVTRLEAPPD 485

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
             +  AR+LT+++A     A L R    +I + F  +RF+D        L      A I+
Sbjct: 486 TLERQARWLTQRLAQCLQGALLLRHAPAEIGETFCRSRFID-ASPVFGTLPADAPEAAIL 544

Query: 556 DSL 558
           + +
Sbjct: 545 NRI 547


>gi|291303095|ref|YP_003514373.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572315|gb|ADD45280.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 542

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/546 (35%), Positives = 284/546 (52%), Gaps = 13/546 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE-LLGEYVLSCTAQEL 73
           + +      A NQ P     N +  +  LV       +    E    LGE + S  A   
Sbjct: 1   MFEAEPVFAAANQVPPLEDRNLFHDNVPLVEAAKWAGAEWVGEAAWALGEVLGSGDAARW 60

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A  AN N P L  +   G R D+V+FHPAWH  +  S+  G H   W        R  AH
Sbjct: 61  AEQANVNRPVLRTHDRYGNRVDEVDFHPAWHRFMALSVEFGCHAMPWRDP-----RDGAH 115

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA    ++ Q+E GH    S+T AS+  L   P +   W P I S  YDP  +    K
Sbjct: 116 AARAVLFSMLGQIEPGHGCPISMTYASVPVLRANPELAAQWEPSITSTSYDPGLRPRQAK 175

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             V +G+ +TEK+GG+D+ A  ++  ++ DG Y L GHKWF S+PM+DAF++LAQ EG +
Sbjct: 176 EGVLVGMAMTEKQGGSDVRANVTRATRLDDGTYALRGHKWFCSAPMNDAFLVLAQAEGGL 235

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR+L DGS N +  QRLK+K+GN +NA+ E+E  +   F +G+       + +M 
Sbjct: 236 SCFLLPRVLPDGSRNAIRIQRLKDKLGNHANASSEIELHDAIAFPVGEEGRGVRTIIEMV 295

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               LD  I + +GMR  +AEA  +A  R   G  LI+QP+M++ +AD+ ++  AATA  
Sbjct: 296 NHTRLDCVIGTAAGMRQCVAEATWHAAHRSAFGKPLIEQPLMRQVLADLCVESEAATATM 355

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++D    R EEAA+ R+   + KYW CK  P   AEA+EC+GG+GY+EE  +AR 
Sbjct: 356 MRLAAAYD----RPEEAAFRRLATAVAKYWVCKRGPGHAAEALECLGGNGYVEEAPLARR 411

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P  SI  GSGN + LD+L  +       E   + +    G+       +  L+  +
Sbjct: 412 YREQPLMSIWEGSGNVVCLDILRAMRTDPETIEAFLNEVGLASGADRAFDAHVAGLKRRL 471

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +    D+  AR L + +ALA   + L R   +++A  F   R  DN  +++  +     A
Sbjct: 472 A-AGPDEASARLLADDLALALQGSLLLRHAPSEVAGAFTAARLGDNRGASYGAVPAGLAA 530

Query: 552 AHIIDS 557
             +++ 
Sbjct: 531 TGLVER 536


>gi|113866265|ref|YP_724754.1| Acyl-CoA dehydrogenase, short-chain specific ( AidB protein)
           [Ralstonia eutropha H16]
 gi|113525041|emb|CAJ91386.1| Acyl-CoA dehydrogenase, short-chain specific (probable AidB
           protein) [Ralstonia eutropha H16]
          Length = 587

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 178/554 (32%), Positives = 287/554 (51%), Gaps = 16/554 (2%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLS 67
           R + +     + +    NQ P     N +++D  L   +       H   L   G  +  
Sbjct: 28  RPSSDPAMTEAATHRVFNQVPDLAHYNLFATDPALRGALERLGGGWHAGTLGQFGARLGE 87

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q+ A  AN +TP+LH +   GER D V+FHP+WHALL       L    + +     
Sbjct: 88  PEVQQWAADANRHTPELHTHSRTGERIDAVDFHPSWHALLALLRSQQLQALPFAQP---- 143

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            R  A   R A  +L AQ+E+G L  P++T AS+  L     +  +  P++++ E+D  +
Sbjct: 144 -RAGAWVARTAGYFLQAQVESGSLCPPTMTFASIPVLRKETALFAELEPRLYATEHDARD 202

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAF 243
                K+++ IG+G+TEK+GG+D+ A T+  + +        Y L+GHKWF S+PM DA 
Sbjct: 203 LPWRSKSAIMIGMGMTEKQGGSDVRANTTVARAVRGEGRGAEYALTGHKWFFSAPMCDAH 262

Query: 244 IMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +++A++   +G + CF VPR  +DGS N +  QRLK+K+GNRSN++ E+EF +  G L+G
Sbjct: 263 LVVARMGAEDGPLSCFFVPRFRDDGSKNAVLIQRLKDKLGNRSNSSSEVEFRDATGILIG 322

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +M     LD  I S + +R +  +A+H+AR R   G +L DQP+M+  +A
Sbjct: 323 EEGRGIPTIIEMATSTRLDCVIGSAAILRAAFVQALHHARHRSAFGRLLADQPLMRNVLA 382

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+AL+  AAT L   L ++F+ A      A++ R++ P  K+W CK       EAME  G
Sbjct: 383 DLALESEAATLLMMELGHAFEHADDDPLAASWKRVVTPAAKFWVCKRTLEATGEAMEVWG 442

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--S 478
           G+GY+EE  +AR YRE+P NSI  GSGN M LDVL  +++  +   +L   L +  G   
Sbjct: 443 GNGYVEEGPMARLYREAPVNSIWEGSGNIMCLDVLRAIQRNPDDAARLLQDLSRRAGGHP 502

Query: 479 SGKKVITILRDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
           + +  +  L+  +    E  +  AR   + + L + AA +      + A++F+ +R    
Sbjct: 503 AVRAELASLQALLRQPPELLEASARRFAQGLVLTAQAALMLAHADTENAELFVASRLGRQ 562

Query: 538 CHSTHCMLHGRFNA 551
                  L    + 
Sbjct: 563 HGRVFGTLDADADV 576


>gi|295678013|ref|YP_003606537.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295437856|gb|ADG17026.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 562

 Score =  455 bits (1170), Expect = e-125,   Method: Composition-based stats.
 Identities = 195/562 (34%), Positives = 295/562 (52%), Gaps = 23/562 (4%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELA 74
           H    +    NQ P     N ++SD+ L A +    +  H+E L   G  + +     LA
Sbjct: 4   HGFGQTHEVTNQAPALADYNLFASDAALSAAVDRDGASWHREALLRHGATLTTPDTLALA 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +        R  A  
Sbjct: 64  ELANRHTPELVTHSPRGERIDALEFHPAWHELLALLRREGLHALPFSDP-----RSGAMA 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  ++ AQ+E+G L   ++T AS+  L   P +      ++++RE+DP +    QK 
Sbjct: 119 ARCAGYFMHAQIESGSLCPLTMTFASIPVLQREPVLFDTLRVQLYTREHDPRDVPLTQKR 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQV 249
           S+ IG+G+TEK+GG+D+ +  ++   +           L GHKWF S+P  DA ++LA+ 
Sbjct: 179 SMMIGMGMTEKQGGSDVRSNRTRAHALDGAGGRGGAYGLIGHKWFFSAPQCDAHLVLART 238

Query: 250 E--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +    + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD      
Sbjct: 239 DTHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVP 298

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  I S + MR +L +AIH+AR R   G  L +QP+M+  +AD+AL+  
Sbjct: 299 TIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSG 423
           AAT L  RLA +F+E+   S  ++  R       P  KYW CK A     EAME  GG+G
Sbjct: 359 AATVLFMRLARAFEESADASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+  +    +     
Sbjct: 419 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPQAAQALFAAWQDVARAHPALG 478

Query: 484 ITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             ++R + +L    ++ +  AR + ++I L + A  L +     +AD F+  R  D C  
Sbjct: 479 AALVRLATTLNGPAEQREASARRIAQQIVLIAQATLLAQHAPAAVADAFIATRVADGCGE 538

Query: 541 T---HCMLHGRFNAAHIIDSLY 559
               +  L   F+ A II+  +
Sbjct: 539 NGRVYGTLPATFDHAAIIERAF 560


>gi|254702973|ref|ZP_05164801.1| acyl-CoA dehydrogenase domain protein [Brucella suis bv. 3 str.
           686]
 gi|261753582|ref|ZP_05997291.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261743335|gb|EEY31261.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 441

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 224/443 (50%), Positives = 301/443 (67%), Gaps = 4/443 (0%)

Query: 12  MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
           MNQ   ++P  +    NQ P   G NAY  D LL+ + A FP  +H ELE  G +VLS  
Sbjct: 1   MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ+LAR+AN   P+L  +   G R D VE+HPA+HAL+RRS+  GLH SIW+ +     R
Sbjct: 61  AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDNPLESGR 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
           +  H+ RAAR YL AQLEAGHL   ++TSAS+ ALM +P V+K W+P + SR+YD + K 
Sbjct: 121 R--HQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             +K  V +G+G+TEK+GGTD+ A  ++ +    G + L+GHKWF+S+PMSDAF+ LAQ 
Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  + CFL+PRL E G  NG  +QRLK+K+GNRSNA+ E+EF    G ++G        +
Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM  L  LD A+ S   MR  LAEA+H++R RHV G  L++QP+M+R +AD+ALD+A A
Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           TALS RLA +FD A S   EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ +
Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418

Query: 430 IARHYRESPANSILLGSGNAMVL 452
           +AR YRE+P N+I  GSGN M L
Sbjct: 419 LARAYREAPVNAIWEGSGNVMAL 441


>gi|148549858|ref|YP_001269960.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148513916|gb|ABQ80776.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 550

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 194/550 (35%), Positives = 287/550 (52%), Gaps = 14/550 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQ-A 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP-----RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNIGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQ-LDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
            + +   + +  AR LTE IALA  A  L  AG  +++D F+ +R        +  L   
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNTEVSDAFIGSRLAGG-GRVYGALPRG 534

Query: 549 FNAAHIIDSL 558
            +   ++   
Sbjct: 535 VDVMALVTRA 544


>gi|332283648|ref|YP_004415559.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Pusillimonas sp. T7-7]
 gi|330427601|gb|AEC18935.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Pusillimonas sp. T7-7]
          Length = 546

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 189/547 (34%), Positives = 287/547 (52%), Gaps = 15/547 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N Y+SD  L   +    +  H++ L+  GE +       +A+ AN 
Sbjct: 5   THEVTNQVPELGDYNLYTSDIALQEGVRREGAQSHEDALQHYGERLGRAETFAMAQEANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  Y   G R D+V FHP+W   +R +   G+H S W         K AH  RAA 
Sbjct: 65  HKPELETYDRLGHRVDRVRFHPSWCRFMRMAFLQGMHSSAWS-----APGKGAHVARAAT 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +  QLEAG L   ++TSA++  L          AP ++S  YD  +   + KTS+ IG
Sbjct: 120 YLMHGQLEAGSLCPVTMTSAAIPVLK-QESWFDTLAPLLYSSRYDERDLPLVDKTSMLIG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ + T++   +  G     Y L+GHKWF SSP SDA ++LA  +    C
Sbjct: 179 MGMTEKQGGSDLRSNTTRAVALGTGGRGMPYHLTGHKWFFSSPTSDAHLVLAGHDDVFSC 238

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR L+DG+ N +  QRLKNK+GN SNA+ E+EF +  G L+G+       + +M   
Sbjct: 239 FYVPRWLDDGNRNSVHIQRLKNKMGNASNASAEVEFQDATGVLVGEAGRGIATLVEMASY 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  + S + +R  + +A+H+AR R   G  L +QP+M+  + D++L+  AAT L+ R
Sbjct: 299 TRLDCVLGSAALLRQGVVQALHHARHRVAFGQALSEQPLMQSVLMDLSLESEAATVLALR 358

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +FD       E AY RI+ P  K+W CK   A + E ME  GG+GYIE+  +AR YR
Sbjct: 359 LARAFDNDGHDPLEQAYRRILTPAAKFWICKRTIAALGECMEVWGGNGYIEDAPMARLYR 418

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS 492
           E+P NSI  GSGN M LDVL  L++   L   +  +L++D        ++V ++L     
Sbjct: 419 EAPVNSIWEGSGNVMCLDVLRGLKRHPELAAVMLESLQRDCADEPMLKQRVASLLSLLTL 478

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
              + +  AR + +++ L   A+ L R     +AD F+ +RF          L       
Sbjct: 479 AGPDQEAAARHIAQELVLLVQASLLRRHAPPVLADAFIHSRF-QLAGRVFGALPTPLALH 537

Query: 553 HIIDSLY 559
            +++  +
Sbjct: 538 AVLERSW 544


>gi|300310313|ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073098|gb|ADJ62497.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 550

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 200/552 (36%), Positives = 289/552 (52%), Gaps = 18/552 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMAN 78
            +    NQ P   G N Y SD+ L   +    +  H   L   GE +     +E+A +AN
Sbjct: 2   HTHEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGGAEMREMAELAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            +TP LH +   G R D VEFHPAWH LL +    GLH   W           AH  RAA
Sbjct: 62  RHTPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPW-----MQPGDGAHAARAA 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             +L AQ+EAG L   ++T A++  L   P + +    ++FSRE+D  +    QK S+ I
Sbjct: 117 GYFLHAQIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILI 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           G+G+TEK+GG+D+ +  S    +          Y LSGHKWF S+PM DA +MLA+ E  
Sbjct: 177 GMGMTEKQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENG 236

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG+ N +  QRLK+K+GNRSN++ E+EF    G ++GD       + +M
Sbjct: 237 LSCFFVPRWLPDGTRNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEM 296

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + MR +L +AIH+AR R   G  L +QP+M+  +AD+AL+  AAT L
Sbjct: 297 ANHTRLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATML 356

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R+A++FD A     + A+ RI+ P  K+W CK       E ME  GG+GY+E   +AR
Sbjct: 357 MLRVAHAFD-APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMAR 415

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDS 490
            YRE+P NSI  GSGN M LDVL  + + T     L   L+       + ++ +  L+  
Sbjct: 416 LYREAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQM 475

Query: 491 ISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++  +E+ +  AR L +++ LA     + R      A  FLE+R   +    +  L    
Sbjct: 476 LAAPEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSAS 535

Query: 550 NAA--HIIDSLY 559
            AA   I+   +
Sbjct: 536 LAAQEAILQRAW 547


>gi|330960139|gb|EGH60399.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 549

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 185/545 (33%), Positives = 272/545 (49%), Gaps = 14/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMA 77
           +++    NQPP    +N Y  D  L      F +      ++  G         E   +A
Sbjct: 7   AETHEVTNQPPPLGEVNLYRIDMPLQEWSQRFGAGWAKSRIDAYGALAGGP-LMEAGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P   ++   G R D VEFHPA+H L+  +I  G+    W        +  AH  RA
Sbjct: 66  NRHKPVFASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTDP-----QPGAHVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q E G     ++T AS+ AL   P + + W PK+ S  YDP N     KT   
Sbjct: 121 AMSYLHTQAEPGTGCPLTMTFASVPALRLQPDLAEIWLPKVLSTRYDPRNIGIAHKTGAT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +G+ +TEK+GGTD+ A T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  +
Sbjct: 181 LGMAMTEKQGGTDVRANTTRAFAVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+ R   + + N    QRLK+K+GN SNA+ E+EF     +++G+       + +M 
Sbjct: 241 SCFLLARHRPNDTRNEFYIQRLKDKLGNASNASSEVEFRGALAWMIGEEGRGVPTILEMV 300

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +   D  I S + MR +L +A+H+   R VSG +L +QP+M+  +AD+AL+  AA AL+
Sbjct: 301 AMTRFDCMIGSSALMRQALTQAVHHCAHRCVSGRVLTEQPLMQNVLADLALESEAALALT 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+  + D       E    R++  + KYW CK APA+I EA EC+GG+GY+E+  + R 
Sbjct: 361 LRMGRALDHLHDDH-EKRLVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRL 419

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSIS 492
           YRE+P NS   GSGN   LDVL  L K     + LF  L    G+      I  L+ +  
Sbjct: 420 YREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGNRHLAAHINNLKAAFQ 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             ++ +  AR LTE IA+A     L  AG   ++D F+  R        +  L       
Sbjct: 480 DTRDIQYRARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRIASG-GRVYGALPRGVEVE 538

Query: 553 HIIDS 557
            ++  
Sbjct: 539 TLLRR 543


>gi|313500760|gb|ADR62126.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 550

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/550 (35%), Positives = 287/550 (52%), Gaps = 14/550 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQ-A 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP-----RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARAAMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQ-LDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGYGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
            + +   + +  AR LTE IALA  A  L  AG  D++D F+ +R        +  L   
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRLAGG-GRVYGALPRG 534

Query: 549 FNAAHIIDSL 558
            +   ++   
Sbjct: 535 VDVMALVTRA 544


>gi|56476533|ref|YP_158122.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312576|emb|CAI07221.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 542

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 201/544 (36%), Positives = 290/544 (53%), Gaps = 12/544 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P+    N + +D  L   +    +  H E L   GE + S   Q LA++A+ 
Sbjct: 4   THEVFNQVPVLSDCNLFDTDIALREAVVRDGAGWHAEALHGQGEVLGSADTQRLAQLADR 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L AY   G R D V+FHPAW  LL     DG+H S W        R  AH  RAA 
Sbjct: 64  HVPELVAYDRCGRRVDDVDFHPAWSCLLALLYADGVHSSAWFEP-----RPGAHVARAAS 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +L  Q EAG L   ++T AS+  L   P +    A K  SR+YD  +     K S  IG
Sbjct: 119 FFLHGQAEAGSLCPVTMTFASIPVLRREPALFGALADKFRSRDYDGRDVPLAGKRSAMIG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+TEK+GG+D+ A T++ + ++ G     L GHKWF S P  DA ++LA     + CF 
Sbjct: 179 MGMTEKQGGSDLRANTTEARPLAAGSRDHLLVGHKWFFSVPTCDAHLVLAHSPAGLSCFF 238

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DGS N +  +RLK+K+GNRSNA+ E+EF + FG L+GD       + +M     
Sbjct: 239 VPRWLPDGSRNAVRIRRLKDKLGNRSNASAEVEFEDAFGTLVGDEGRGIATIMEMAAQTR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S + MR +L EAIH+AR R   G +L+ QP+M+  +A++AL+   AT L+ RLA
Sbjct: 299 LDCVLGSAALMRRALVEAIHHARHRSAFGNVLVAQPLMRNVLAELALESEVATMLAMRLA 358

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +  E+     E A+ RI+ P  K+W CK A A +AE ME  GG+GY+E+  +AR YRE+
Sbjct: 359 KAV-ESDDDPLERAWRRIVTPAAKFWICKRAIAFVAECMEVWGGNGYVEDGPMARLYREA 417

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P NSI  GSGN M LDVL    +  +  E L+  L Q L  +      +  L + +    
Sbjct: 418 PVNSIWEGSGNVMCLDVLRAAAREPDGVEALWRELSQALAGNAALVHALGDLANRLRAPA 477

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           E +  AR +  ++ L   A  L R    ++A  F+++RF         +L  + +A  +I
Sbjct: 478 EAEWHARHVAMQLVLLVQAGLLLRHAPGNVAAAFIDSRFDRPAGQVPGLL-TKPDATTLI 536

Query: 556 DSLY 559
           D  +
Sbjct: 537 DRAW 540


>gi|209517312|ref|ZP_03266155.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209502195|gb|EEA02208.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 562

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/562 (34%), Positives = 295/562 (52%), Gaps = 23/562 (4%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELA 74
           H    +    NQ P     N ++SD+ L   +    +  H+E L   G  + +     LA
Sbjct: 4   HGFGQTHEVTNQAPPLADYNLFASDTALSEAVDRDGAQWHREALLRHGAALTTPATLALA 63

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +        +  A  
Sbjct: 64  ELANRHTPELITHSPRGERIDALEFHPAWHELLALLRREGLHALPFSEP-----QNGAMA 118

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  +L AQ+E+G L   ++T AS+  L + P +       +++RE+DP +    QK 
Sbjct: 119 ARCAGYFLHAQIESGSLCPLTMTFASIPVLQSEPALFATLREALYTREHDPRDLPLTQKR 178

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQV 249
           S  IG+G+TEK+GG+D+ +  ++   +           L GHKWF S+P  DA ++LA+ 
Sbjct: 179 SAMIGMGMTEKQGGSDVRSNQTRAHALDGAGGRGGAYRLIGHKWFFSAPQCDAHLVLART 238

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G ++GD      
Sbjct: 239 GTHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVP 298

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  I S + MR SL +AIH+AR R   G  L +QP+M+  +AD+AL+  
Sbjct: 299 TIIEMANYTRLDCVIGSAALMRASLVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESE 358

Query: 368 AATALSFRLANSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           AAT L  RLA +F+     + + S E A+ RI+ P  KYW CK A     EAME  GG+G
Sbjct: 359 AATVLFMRLARAFEGSDDASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+  +    +     
Sbjct: 419 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPQAAQALFAAWQDVARAHPALG 478

Query: 484 ITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             + R + +L    ++ +  AR + ++I L + A  L +     +AD F+  R  D C  
Sbjct: 479 AALARLAATLNGPAEQREASARRIAQQIVLIAQATLLAQHAPATVADAFIATRLADGCGE 538

Query: 541 T---HCMLHGRFNAAHIIDSLY 559
           +   +  L   F+ A I++  +
Sbjct: 539 SGRVYGTLPATFDHAAIVERAF 560


>gi|161523296|ref|YP_001578308.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189351932|ref|YP_001947560.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
 gi|160340725|gb|ABX13811.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189335954|dbj|BAG45024.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
          Length = 550

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 182/550 (33%), Positives = 283/550 (51%), Gaps = 17/550 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ    +  N +++D  L   +A         +L+  G  + S     LA  AN 
Sbjct: 5   THVVTNQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L+ +   G R D+VEFHPAWHALL    ++G     +  +     R+      AA 
Sbjct: 65  HTPELNVFDRRGRRIDRVEFHPAWHALLGLYRNEGFVSLAFRDT-----RRGRWAATAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G
Sbjct: 120 FYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   
Sbjct: 180 MGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPS 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM  
Sbjct: 240 CFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMAT 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ 
Sbjct: 300 YTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA++F E      E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +
Sbjct: 360 RLADAF-EHDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLF 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           RE+P NSI  GSGN M LDVL  + +  +    LF+ L +        +  +  LR  ++
Sbjct: 419 REAPVNSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSELGAGEPRIRAALDALRAMLA 478

Query: 493 LCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCML-HGRF 549
              +  +  AR   E++AL + A  L R     ++D F+  R  +               
Sbjct: 479 APADTLEASARLFAERLALTAQACLLRRDAPAAVSDAFIATRLGEASWGRVAGAFDPHAI 538

Query: 550 NAAHIIDSLY 559
           +   +++  Y
Sbjct: 539 DVGALLERAY 548


>gi|254250963|ref|ZP_04944281.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124893572|gb|EAY67452.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 550

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 178/554 (32%), Positives = 285/554 (51%), Gaps = 17/554 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L   +A         +L+  G  + S     LA 
Sbjct: 1   MTEPTHVVTNQFDELVDYNLFATDVALREALARAGADWAAPQLDAYGARLGSADTARLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN + P+L+A+   G R D+V+FHPAWH LL    ++GL    +  +     R+     
Sbjct: 61  EANRHPPELNAFDRRGRRIDRVDFHPAWHTLLGLYRNEGLVSLAFRDT-----RRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRS 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
              G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E 
Sbjct: 176 TWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEA 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GGPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+ R+A++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 ALAMRVADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILR 488
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L +        +  +  LR
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDSAAALFDELTELGAGEPRIRAALDALR 474

Query: 489 DSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCML 545
             +++  +  +  AR   +++AL + A  L R     ++D F+  R  ++          
Sbjct: 475 AMLAVPADTLEAAARLFAQRLALVAQACLLRRDAPAAVSDAFIATRLAESSWGRIAGGFD 534

Query: 546 HGRFNAAHIIDSLY 559
               +   +++  Y
Sbjct: 535 PQTIDVGALLERAY 548


>gi|26991460|ref|NP_746885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24986536|gb|AAN70349.1|AE016676_9 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 550

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/550 (35%), Positives = 287/550 (52%), Gaps = 14/550 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73
           +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q  
Sbjct: 3   LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQ-A 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  AH
Sbjct: 62  GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP-----RAGAH 116

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     K
Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249
             V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ 
Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       +
Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+  
Sbjct: 357 LALSLRMGQALEQ-LDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILR 488
           + R YRE+P NS   GSGN   LDVL  L K   + + LF  L    G       I  L+
Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
            + +   + +  AR LTE IALA  A  L  AG  D++D F+ +R        +  L   
Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRLAGG-GRVYGALPRG 534

Query: 549 FNAAHIIDSL 558
            N   ++   
Sbjct: 535 VNVMALVTRA 544


>gi|300023177|ref|YP_003755788.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524998|gb|ADJ23467.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 541

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 204/542 (37%), Positives = 290/542 (53%), Gaps = 16/542 (2%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
             NQPP     N + SD++L         S     L+ LG  + S     L   AN NTP
Sbjct: 4   VTNQPPPLEDYNLFDSDAVLREAAGREGASWAESSLQALGARLGSADVIALGAEANRNTP 63

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            L A+   G R D+V+FHP+WHALL  ++  GLH S W        ++ AH  RAA  ++
Sbjct: 64  TLRAFDRSGARIDEVDFHPSWHALLGLAMEAGLHSSPWAEP-----KRGAHVARAAGCFM 118

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +AQ+E+G     S+T  ++  L   P V  DW P+IFSR YDP  +   +KTS  IG+ +
Sbjct: 119 LAQIESGVYCPVSMTYGAVPTLKRAPHVAADWLPRIFSRSYDPRFRPAHEKTSALIGMAM 178

Query: 203 TEKRGGTDIAAITSQGQ-KISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           TE +GG+D+ A  S+ +   +DG    Y L+GHKWF+S+PM DAF+MLAQ +    CFLV
Sbjct: 179 TENQGGSDLRANVSRAEFSEADGERRYYRLNGHKWFMSAPMCDAFLMLAQTDAGPTCFLV 238

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DG+ N +  +RLK+K+GNRSNA+ E+E  N    LLGD       + +M     L
Sbjct: 239 PRWKPDGTRNAIHIRRLKDKLGNRSNASSEVELENAHAELLGDEGRGIPTIIEMGNYTRL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D  I S   MR ++A+AIH+AR R      L+D  +M   +AD+A++  AA  L+ RLA 
Sbjct: 299 DCVIGSSGLMRQAVAQAIHHARYRTTFQKHLVDHALMSNVLADLAIEAEAAALLALRLAR 358

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++DE     E   + R++ P  K+W CK APA  AEAME +GG+GY+E+  +AR YRE P
Sbjct: 359 AYDE--DSEEALTFRRVVTPAAKFWICKRAPAFAAEAMEVLGGNGYVEDFGLARIYREVP 416

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
            NSI  GSGN M LDVL  + K       L   + +D  ++ +++   L    +      
Sbjct: 417 VNSIWEGSGNIMCLDVLRAIAKAPLAAAVLADEM-RDAATADRRLAQFLARMQATATSIG 475

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           D+  AR     + +A  A+ L R     +AD F  +R  D       ML    +   I++
Sbjct: 476 DEAQARVFVRDLVIALQASLLIRHAPQIVADAFCASRL-DGGSGAFGMLPPGVDTRRIVE 534

Query: 557 SL 558
             
Sbjct: 535 RA 536


>gi|226362674|ref|YP_002780452.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241159|dbj|BAH51507.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 563

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 192/557 (34%), Positives = 289/557 (51%), Gaps = 23/557 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N ++ D++L   +     +   +EL  +G  V S   Q  A +
Sbjct: 14  PHRTHTVLNQSVPRTDVNEFTLDTVLSDAVRRHDAAWATQELTDVGALVGSAQFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W        +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAWADP-----KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L AQ+E GH    S+T+A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFAQIEPGHSCPISMTNAVIPSLDLQPDVAAIWKPRALSRSYIPELDAPG-KASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +        G Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTVAKPAGRGGPGGDYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 GGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVARTRLDCVLGSAAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  +  +E ++ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATVTALRLARAHDE-DASEQERSFRRLATAVAKYWICKRGPHHAYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITI 486
            +AR YRE P  ++  GSGN + LDVL  + +  +      + +    GS+      +  
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNTVLDAHLDR 486

Query: 487 LRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           +R  +           +  AR + E +ALA  A+ L R     +AD F++ R   +    
Sbjct: 487 VRRQLGDLATLDPASAQLRARTVVESMALALQASLLIRFSPAAVADTFVDARLGPDRTHE 546

Query: 542 HCMLHGRFNAAHIIDSL 558
           +  L    +   I+   
Sbjct: 547 YGTLSPAADLRAILSRA 563


>gi|254246705|ref|ZP_04940026.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184]
 gi|124871481|gb|EAY63197.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184]
          Length = 1070

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 180/536 (33%), Positives = 281/536 (52%), Gaps = 17/536 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L   +A         +L+  G  + S     LA 
Sbjct: 1   MTDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN +TP+LH +   G R D+V+FHPAWHALL +  H+G     +        R+     
Sbjct: 61  EANQHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRDP-----RRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K +
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPLADKRA 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV-E 250
           +  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+  +
Sbjct: 176 IWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTED 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GGPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L+ RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 SLAMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITIL 487
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+     +  +  L
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDELA-DLGAGEPRIRAALDAL 473

Query: 488 RDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
           R  ++   +  +   R   +++A+ + A  L R     +AD F+  R        +
Sbjct: 474 RAMLAAPTDTLEASGRVYAQRLAVVTQACLLRRDAPAAVADAFVATRLAAPDWGPY 529


>gi|221214279|ref|ZP_03587251.1| protein AidB [Burkholderia multivorans CGD1]
 gi|221165934|gb|EED98408.1| protein AidB [Burkholderia multivorans CGD1]
          Length = 550

 Score =  452 bits (1162), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/550 (32%), Positives = 283/550 (51%), Gaps = 17/550 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ    +  N +++D  L   +A         +L+  G  + S     LA  AN 
Sbjct: 5   THVVTNQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L+ +   G R D+VEFHPAWHALL    ++G     +  +     R+      AA 
Sbjct: 65  HTPELNVFDRRGRRIDRVEFHPAWHALLGLYRNEGFVSLAFRDT-----RRGRWAATAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G
Sbjct: 120 FYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   
Sbjct: 180 MGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPS 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM  
Sbjct: 240 CFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMAT 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ 
Sbjct: 300 YTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA++F E      E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +
Sbjct: 360 RLADAF-EHDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLF 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           RE+P NSI  GSGN M LDVL  + +  +    LF+ L +        +  +  LR  ++
Sbjct: 419 REAPVNSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSELGAGEPRIRAALDALRAMLA 478

Query: 493 LCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCML-HGRF 549
              +  +  AR   +++AL + A  L R     ++D F+  R  +               
Sbjct: 479 APADALEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRLGEASWGRVAGAFDPHAI 538

Query: 550 NAAHIIDSLY 559
           +   +++  Y
Sbjct: 539 DVGALLERAY 548


>gi|262204088|ref|YP_003275296.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087435|gb|ACY23403.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 559

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/557 (34%), Positives = 286/557 (51%), Gaps = 24/557 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELAR 75
           QP  +   LNQ    + +N Y  +++L   ++         EL  +G  V S   Q  A+
Sbjct: 10  QPHLTHEVLNQSQPRVDVNEYELNTVLQEAVSRHDAGWADAELREIGALVGSEQFQHDAK 69

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN  TP LH +   G R D+VE+HP++H ++  +I  G H   W        +  +H  
Sbjct: 70  LANTITPTLHTFDRWGRRIDEVEYHPSYHRIISAAISHGAHTRCWADP-----QPGSHVA 124

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAA   L  Q+E GH    S+T A + +L   P V   W PK  S EY P   A   K S
Sbjct: 125 RAAAFMLFGQIEPGHACPVSMTHAVIPSLELQPDVAALWVPKALSSEYSPELSA--DKPS 182

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEG 251
              G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG
Sbjct: 183 AIFGMSMTEKQGGSDVRANTTVARPAGAGGPGTEYLLTGHKWFCSAPMSDAFLVLAQAEG 242

Query: 252 RVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             G    CFL+PR+L DG+ N    QRLK+K+GN+SNA+ E+E   T  +++G+      
Sbjct: 243 PGGEGLSCFLLPRVLPDGTHNVFRIQRLKDKLGNKSNASSEIELDGTVAYMVGEPGRGVR 302

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S +GMR S+AEA+ +AR R+  G  L+DQP M   +AD+AL+  
Sbjct: 303 TIIEMVAQTRLDCVLGSAAGMRQSVAEAVWHARHRNAFGARLVDQPAMTAVLADLALESE 362

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT  + RLA + DE    S E A+ R+   + KYW CK  P    E++EC+GG+GY E+
Sbjct: 363 AATVTAMRLARAHDEDADDS-ERAFRRLATAVAKYWICKRGPHHAYESLECLGGNGYTED 421

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVIT 485
             +A  YRE P  ++  GSGN + LDVL  + +         + + +  GS       + 
Sbjct: 422 FPLAMRYREQPVMAVWEGSGNVIALDVLRAMTREPESVAAFDAEVSKARGSHPVLDAHLD 481

Query: 486 ILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
            LR  +           +  AR + E +ALA  A+ L +     +A+ F+  R   +   
Sbjct: 482 RLRVDLGELARLDAAGAQRRARSVVEGMALALEASLLVQYSPTPVAEAFVGARLGADRGF 541

Query: 541 THCMLHGRFNAAHIIDS 557
            +  L G  +   I+D 
Sbjct: 542 EYGTLPGGADLGAILDR 558


>gi|239815892|ref|YP_002944802.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802469|gb|ACS19536.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 546

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/549 (35%), Positives = 297/549 (54%), Gaps = 20/549 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP   +G N + ++  L   +  N PS+   +L  LG  + S   Q  AR+AN 
Sbjct: 4   THEVFNQPEPLVGYNLFETNRPLRDALKFNAPSLQLAQLSELGATIGSAEMQAHARLANT 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+LH +   G R D+VEFHP++H L+  ++  GLH + W  +        +H +RAA 
Sbjct: 64  HPPELHTHDRFGRRIDEVEFHPSYHVLMAAAVGAGLHGTPWTGTSA-----SSHVLRAAG 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L  +LE   L   S+T A+  AL +   V+ DW PK+ S  YDP   +   K  V +G
Sbjct: 119 FMLFTELEPSILCPVSMTYAATPALRSNAVVYADWGPKLGSLWYDPALASFKDKPGVTMG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ A T+Q  +   D     Y ++GHKWF S+PM DAF++LAQ    + C
Sbjct: 179 MGMTEKQGGSDVRANTTQAVRGGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSC 238

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F +PR+L DGS N +  QRLK+K+GN++NA+ E+EF     +L+G+       + +M  +
Sbjct: 239 FFLPRVLPDGSRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTM 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ +   MR +L  A+++A +R   G  LI QP+MK  +AD+AL+  A+TAL+ R
Sbjct: 299 TRLDCALGTSGLMRQALGIALNHASQRMAFGKPLIGQPLMKNVLADLALESEASTALAIR 358

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IAR 432
           LA +FD+ ++   E   AR++ P+ K+W CK       EAMEC+GG+GY+EE     +AR
Sbjct: 359 LARAFDQ-QADEHERLMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMAR 417

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  G+GN M LD+L  L KG +    L   L    G      +  L D++ 
Sbjct: 418 IYREMPLNSIWEGAGNIMALDLLRGLRKG-DAVAALAKELAPARGQ--HAALDRLADALP 474

Query: 493 LCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
              E    +  AR L + +ALA  AA L +     +   F  +R   +  +    L    
Sbjct: 475 ARIEAMASEAEARRLAQDVALAVQAALLAQTAPPAVVGAFCASRLGGDWGNAFGTLGAGT 534

Query: 550 NAAHIIDSL 558
           +   II+  
Sbjct: 535 DFDSIIERA 543


>gi|104783742|ref|YP_610240.1| acyl-CoA dehydrogenase AidB [Pseudomonas entomophila L48]
 gi|95112729|emb|CAK17457.1| putative acyl-CoA dehydrogenase (AidB) [Pseudomonas entomophila
           L48]
          Length = 551

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 195/551 (35%), Positives = 287/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G          
Sbjct: 2   NLHQFAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGP-LMT 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  A
Sbjct: 61  AGFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP-----RAGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T A++ AL   P +   W PKI +REYDP N     
Sbjct: 116 HVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPALAGYWLPKILAREYDPRNIGDRH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQPYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +  + CFL+PR   D   N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TDKGLSCFLLPRHRPDDQRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + D+     ++A ++R++  + KYW CK AP +I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSLRMCQALDQ-LDDPQQAHFSRLVTAVGKYWICKRAPGMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + + LFS L    G +     I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFSELGDGHGDARLAAFIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R        +  L  
Sbjct: 475 KGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNATVSDAFIGSRLSG-SGRVYGALPR 533

Query: 548 RFNAAHIIDSL 558
             +AA ++   
Sbjct: 534 GVDAAALVARA 544


>gi|221202167|ref|ZP_03575202.1| protein AidB [Burkholderia multivorans CGD2M]
 gi|221208772|ref|ZP_03581771.1| protein AidB [Burkholderia multivorans CGD2]
 gi|221171404|gb|EEE03852.1| protein AidB [Burkholderia multivorans CGD2]
 gi|221177961|gb|EEE10373.1| protein AidB [Burkholderia multivorans CGD2M]
          Length = 550

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/550 (32%), Positives = 282/550 (51%), Gaps = 17/550 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ    +  N +++D  L   +A         +L+  G  + S     LA  AN 
Sbjct: 5   THVVTNQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L+ +   G R D+VEFHPAWHALL    ++G     +  +     R+      AA 
Sbjct: 65  HTPELNVFDRRGRRIDRVEFHPAWHALLGLYRNEGFVSLAFRDT-----RRGRWAATAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+EAG L   ++T A++  L   P + +    K++S +YD  +     K S+  G
Sbjct: 120 FYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           +G+TEK+GG+D+ A T+           G Y L GHKWF S+PM DA +++A+ E G   
Sbjct: 180 MGMTEKQGGSDVRANTTLATPAGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPS 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LGD       + DM  
Sbjct: 240 CFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMAT 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ 
Sbjct: 300 YTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA++F E      E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +
Sbjct: 360 RLADAF-EHDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLF 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           RE+P NSI  GSGN M LDVL  + +  +    LF+ L +        +  +  LR  ++
Sbjct: 419 REAPVNSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSELGAGEPQIRAALDALRAMLA 478

Query: 493 LCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCML-HGRF 549
              +  +  AR   +++AL + A  L R     ++D F+  R  +               
Sbjct: 479 APADTLEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRLGEASWGRVAGAFDPHAI 538

Query: 550 NAAHIIDSLY 559
           +   +++  Y
Sbjct: 539 DVGALLERAY 548


>gi|238795293|ref|ZP_04638872.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC
           29909]
 gi|238725378|gb|EEQ16953.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC
           29909]
          Length = 547

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/535 (33%), Positives = 276/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   +         + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGETLSLIGLQLGSSESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  ++  LH   W        R  +   RAA
Sbjct: 68  TNPPELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRLHNLPWQED----ARIGSFAARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+E+G L   ++T  ++  L  T P + ++W   + S  +DP      QK  + 
Sbjct: 124 RFILHAQVESGSLCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRFDPHQSIGSQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ +G +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLEGRGNGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DGS N +  +RLK+K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 244 SCFFLPKILPDGSYNAIRLERLKDKLGNRSNASSEVEFDNATAWLLGDEGDGVRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA+++ E    + E  ++R++ P  KY  C      +AEAME +GG GY E+  + R 
Sbjct: 364 MRLASAW-EKSDEAHEQIFSRLLTPAAKYRVCGQGSGFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL    K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTFRKLPAAIEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  LT+++     A+ L R     + D +   R   +    + ML 
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPPLVDAWC--RMTLDHRDQY-MLP 532


>gi|311281267|ref|YP_003943498.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
 gi|308750462|gb|ADO50214.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
          Length = 540

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 188/528 (35%), Positives = 278/528 (52%), Gaps = 9/528 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPLPLNNSNLFLSDCALREAVAREGAGWDIDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  + P GER D V FHPAWH L++    + +H   W  +     R  + 
Sbjct: 59  GRLANANPPELLRFDPSGERVDDVRFHPAWHLLMQGLCANRVHNLAWKEA----ARDGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L+T  P    DW   + S  YD       Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPITMTFAATPLLLTHLPAAFADWRAPLQSDRYDTHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKQSDGTYRLLGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFLPRFLPDGQRNAVRLERLKDKLGNRSNASSEVEFFDATGWLIGEEGEGVRQILKM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S   MR +L+ A+++A +R   G  L+DQP+M++ ++ +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHGLMRRALSVALYHAHQRQAFGKNLVDQPLMRQVLSRMALQLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D + + +EEA +AR+  P  K+  CK     +AEAME +GG GY E+  + R
Sbjct: 355 LFRLARAWDRSTA-AEEALWARLFTPAAKFALCKAGIPFVAEAMEVLGGIGYCEDNELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDVL +L K   + E L     +  G          +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPGVQELLSMMCSEVKGQDRHFDRAWRQLQQR 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           L K  +   R +T +I L    A + +     +A  +          S
Sbjct: 474 LRKPLETEGREITRQIYLLGCGAQMLKQASPPVAQAWCRMMLDTRGGS 521


>gi|320168853|gb|EFW45752.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 631

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 192/603 (31%), Positives = 285/603 (47%), Gaps = 64/603 (10%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQPP     N +S D  LV  +    +      LE  G  + S    +L   A
Sbjct: 21  AATHVVTNQPPPLADYNVFSQDRALVETVKRHGAGWEAAGLERFGAVIGSKRVIDLGHTA 80

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC----SIWDRSFEPVVRKQAH 133
           N   P L  +   G R D+VEFHP++H L+   I  G+      +I          + AH
Sbjct: 81  NRFPPILKTHDRYGNRIDEVEFHPSYHELMSIGIGAGVASFAWNAIAAAPAGTKSVRGAH 140

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ- 192
             RAA LYLM+Q E G     S+T A +  +   P++ + W P + SREYD   +A    
Sbjct: 141 VARAAYLYLMSQAEYGVCCPMSMTYAGVPVIRKLPKLAELWEPLLLSREYDSRFQAAAIA 200

Query: 193 ---------------KTSVAIGLGLTEKRGGTDIAAITSQGQKI------SDGIYCLSGH 231
                          K    IG+ +TEK+GG+D+ A T+  + +          Y L GH
Sbjct: 201 SASASAAAAGSSNQGKRGATIGMAMTEKQGGSDVRANTTIARPVNPSQTGPGSEYLLWGH 260

Query: 232 KWFLSSPMSDAFIMLA----QVEGR-------------------VGCFLVPRLLEDGSPN 268
           KWF S+PMSD F+ LA    + +                     + CF VPR   DG+ N
Sbjct: 261 KWFCSAPMSDGFLTLAYIPRETDPATATSAAASSAAGKSAAAGAMSCFFVPRFRPDGTKN 320

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            L   RLK+K+GN++NA+ E+E+ NT+  L+ +       + +M     LD +I   + M
Sbjct: 321 NLTVMRLKDKLGNKANASSEIEYHNTWAVLVSEPGRGVPTIIEMVNHTRLDCSIGGAAIM 380

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R+ LA A+H+   R   G  L+DQP+MK  +AD+A++  AATA++FR+A SFD      +
Sbjct: 381 RIGLAHALHHVTYRSAFGNRLLDQPLMKSVLADLAIEAEAATAMAFRIAESFDMGSGSKQ 440

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E+ +ARI  PITKYW CK  P  + EAMEC GG+GY E+  +AR YRE+P N+I  GSGN
Sbjct: 441 ESLFARIATPITKYWICKRTPNHVYEAMECHGGNGYTEDFVLARAYREAPLNAIWEGSGN 500

Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQD---LGSSGKKVITILRDSIS----------LCK 495
            + LDVL  ++      +     ++ D     +   + +  L   I+            +
Sbjct: 501 VIALDVLRAMQTAPEAIQAFLQEIKTDTSGKNADLDQAVQDLEAQIANQQKLSRDGNAQQ 560

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR-FNAAHI 554
             +   R L + +AL    + L R    ++ADVF  NR        +  +  R   A  I
Sbjct: 561 AMEANGRNLVDLMALTLQGSLLVRHAPQEVADVFCRNRLRHRYAGNYGAIDIRAAEAEAI 620

Query: 555 IDS 557
           I+ 
Sbjct: 621 IER 623


>gi|308451696|ref|XP_003088765.1| hypothetical protein CRE_23827 [Caenorhabditis remanei]
 gi|308245410|gb|EFO89362.1| hypothetical protein CRE_23827 [Caenorhabditis remanei]
          Length = 552

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 172/555 (30%), Positives = 282/555 (50%), Gaps = 16/555 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73
              +   +    NQ       N  ++D +L  ++  + S   + L    +   S    E 
Sbjct: 2   NTAENWQTHEISNQFDELQNYNLLTTDQVLQEILQRYGSQDQQRLTEFSQIAGSTEYYEY 61

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A +AN +TP+LH++   G R D +EFHPAWH  +R +     H   ++            
Sbjct: 62  ADLANRHTPELHSFDARGRRKDFLEFHPAWHKWMRLNRQFDTHAHPFNHPQS----SSKW 117

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
              AAR +L  Q+E G+L   S+T  S+  +   P +      K+ S EYD  +    QK
Sbjct: 118 VDWAARFFLSGQVECGNLCPNSMTLGSIPLIQNEPELWAKVGEKLLSTEYDERDIPISQK 177

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV 249
            S+ +G+G+TEK+GG+D+ A  ++   +++      Y L+GHKWF S+PM DA +++A+ 
Sbjct: 178 KSIWLGMGMTEKQGGSDVRANETRAVPVAESGRGQAYLLTGHKWFFSAPMCDAHLVVAKT 237

Query: 250 E-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           E   + CF VPR LEDG+ N +  QRLK+K+GNRSN++ E+EF N +G ++G+       
Sbjct: 238 EQDGLACFFVPRWLEDGTKNPVQVQRLKDKVGNRSNSSSEVEFKNAWGIMIGEAGRGIPT 297

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     L  ++ S + +R +L + I Y R+R   G  L +QP+M+  +AD+AL+  A
Sbjct: 298 IIEMANYTRLTCSVGSSAMLRQALVQCIAYTRQRKAFGKHLAEQPLMQAVLADLALETEA 357

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  LSF LA+ ++     S   A+ RIM P  K+W CK    +  E ME  GG+GY++  
Sbjct: 358 AMQLSFHLAHCYESDDELSL--AWRRIMTPAAKFWVCKRTVELTGEMMEVFGGNGYVDTG 415

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVIT 485
            +AR ++E+P N+I  GSGN M LDVL  +++     E LF +  Q          ++  
Sbjct: 416 IMARIFKEAPVNTIWEGSGNVMCLDVLRAIQRDRESIEVLFKSFAQVASQDSILQDELQA 475

Query: 486 ILRDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           + +    L   E + +AR L  ++ + + A  L +   + +AD F+  R+         M
Sbjct: 476 LFKLFSGLQADELQFMARSLVSRLVILAQAILLKQHAPDFVADAFIATRYSAFYGRVVGM 535

Query: 545 LHG-RFNAAHIIDSL 558
           L     +   ++D  
Sbjct: 536 LDAQAVDVKRLLDRA 550


>gi|238797598|ref|ZP_04641095.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC
           43969]
 gi|238718595|gb|EEQ10414.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC
           43969]
          Length = 548

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 186/535 (34%), Positives = 278/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDMALREAVVREHAGWDGEALSLMGLQLGSQESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  +   +H   W        R  +   RAA
Sbjct: 68  NNPPELLRYDAAGQRLDQVRFHPAWYVLMQELVKHRVHNLPWQED----ARIGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + K+W P + S  YD       QK  + 
Sbjct: 124 RFILHAQVEAGSLCPITMTFGAIPLLQQTLPPLFKNWLPPLLSDRYDSHQTVGSQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLGMRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK+K+GNRSNA+ E+EF     +LLGD       +  M 
Sbjct: 244 SCFFLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDQATAWLLGDEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ E  + + E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 MRLARAW-EKPNEAHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL    K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTFRKLPMAIEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  LT+++     AA L R     +AD +   R   +    + ML 
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCAAQLLRFASPPLADAWC--RMTLDHRDQY-MLP 532


>gi|88799657|ref|ZP_01115232.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88777551|gb|EAR08751.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 557

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 189/548 (34%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           +++    N PPL   +N + SD +LL  L          +L  LG  V S    + A  A
Sbjct: 12  AETHTVENTPPLLENINLFDSDLTLLECLDRGQAGWASGQLSELGAIVGSAERLQAAMEA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P L  +   G R D+V FHP +H  +  S  +GL  S W++      +  AH  RA
Sbjct: 72  NRVRPALATHDRYGHRIDEVTFHPGYHDFMTLSKANGLTGSPWEK-----AQPGAHVARA 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL++Q+EAGH    ++T AS+  L+  P +  +W PKI +R Y+P N    +K SV 
Sbjct: 127 AGSYLVSQVEAGHCCPITMTFASVPTLLKQPDIADEWIPKILNRAYEPGNVPYFEKQSVT 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           IG+ +TEK+GG+D+ A +++ + I      DG   + GHK+F S+PM DAF++LA  +  
Sbjct: 187 IGMAMTEKQGGSDVRANSTRAEAIDPESPKDGFELI-GHKFFASAPMCDAFLVLAYTDVG 245

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR   DGS N + + RLK+K+GN SNA+ E+E    FG+L+G+       + +M
Sbjct: 246 LSCFLVPRWRPDGSKNPIQFLRLKDKMGNVSNASSEIELRGAFGWLIGEEGRGVANILEM 305

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D  + S + MR  + + +H+ + R   G  LIDQP+M+  +AD+ L+  AAT L
Sbjct: 306 VALTRFDCLVSSAAAMRQHMTQILHHTQHRAAFGKKLIDQPLMRNLLADLELEAEAATLL 365

Query: 373 SFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +FR+A + D +A+   +E A+AR+   I KYW CK  P    EAME IGGSG +E   + 
Sbjct: 366 AFRVAQALDGQAQGHRDEGAFARLATAIGKYWVCKRQPNHAYEAMETIGGSGVMENSVMP 425

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRD 489
           R YR++P N+I  GSGN   LD L  +++  +    + + +E   G  +     +  L+ 
Sbjct: 426 RLYRDAPINTIWEGSGNVQCLDALRAIQRDPDSLAAVMAEIELAKGLNAHFDDHLQGLQQ 485

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
            ++  ++ +  AR L + +ALA  A+ + R      A  F + RF  +   T+ +L    
Sbjct: 486 QLTQTEDLEFRARSLVQSLALALQASLMLRHMPTSHAHAFCDARFHAH-GLTYGLLPPGT 544

Query: 550 NAAHIIDS 557
           +   I++ 
Sbjct: 545 DCEAILER 552


>gi|239995841|ref|ZP_04716365.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Alteromonas macleodii ATCC 27126]
          Length = 535

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 202/539 (37%), Positives = 300/539 (55%), Gaps = 16/539 (2%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEY--VLSC 68
           M   ++   +    NQP +    N +  D+LL  L+  + PS    +  LLG+Y  +   
Sbjct: 1   MTSSNR-FVTHVVENQPTISTPYNLWRDDTLLRVLVVQHLPSSHQHDEGLLGQYGQIAGD 59

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
                  +AN N P LH +   G R D VEFHP++HAL+  ++    H   W        
Sbjct: 60  ALMAHGELANKNKPTLHTFDRYGRRIDDVEFHPSYHALMESAMQHNAHNYSWKHE----G 115

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            + AH  RAA +Y+  Q E+G     ++T A++ A+    ++   +  K  +  YDP + 
Sbjct: 116 IEGAHTFRAALMYMHYQAESGTSCPLTMTHAAIPAMRYGKQLPPVYLEKTINGVYDPRSL 175

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
              QK  + IG+G+TEK+GG+D+   T+   K +DG Y + GHK+F S+PM DA ++LAQ
Sbjct: 176 PASQKHGLTIGMGMTEKQGGSDVRRNTTTAVKQADGSYHIVGHKFFFSAPMCDAHLILAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            EG + CFL+PRLLE+G+ N +  QRLK+K+G+ SNA+ E+EF     +L+G+       
Sbjct: 236 AEGGLSCFLLPRLLENGALNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVPV 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + DM  L  LD  I S + MR SL  A+H+   R   G  L++QP+M+  +AD+ ++ AA
Sbjct: 296 IIDMVSLTRLDCMIGSSALMRQSLIHALHHVSHRDAFGKTLVNQPLMQNVLADLTIECAA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           ATAL+ R+A + D A S + EAA AR+   I KYW CK  P  + EA EC+GG GY+EE 
Sbjct: 356 ATALTMRVAKAVDSASSDNHEAALARLATAIGKYWVCKRTPMFVNEAQECLGGIGYVEEN 415

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI-- 486
            + R+YR++P NSI  GSGN   LDVL  L K  ++ E LFS L+   G +    I +  
Sbjct: 416 PMPRYYRQAPLNSIWEGSGNVQCLDVLRALAKEPSVKEALFSELKTQAGKNKHYDIHLSK 475

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN------DIADVFLENRFLDNCH 539
           L D +S  +  +  +R+LTE++ALA  A +L    +N      DIA  F E+R  + C 
Sbjct: 476 LFDELSNTQNMETRSRYLTEQMALALQACSLLATSLNNDNALIDIAHTFCESRLGNACG 534


>gi|170731486|ref|YP_001763433.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169814728|gb|ACA89311.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 550

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 182/555 (32%), Positives = 285/555 (51%), Gaps = 19/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L   +A         +L+  G  + S     LA 
Sbjct: 1   MTDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN +TP+LH +   G R D+V+FHP WHALL +  H+G     +        R+     
Sbjct: 61  EANQHTPELHTFDRRGRRIDRVDFHPVWHALLGQYRHEGFVSLAFRDP-----RRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRS 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV-E 250
           +  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+  +
Sbjct: 176 IWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTED 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GGPSCFYVPRWRPDGTKNAIEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L+ RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 SLAMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITIL 487
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+     +  +  L
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDELA-DLGAGEPRIRAALDGL 473

Query: 488 RDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCM 544
           R  ++   +  +   R   +++A+ + A  L R     +AD F+  R    +        
Sbjct: 474 RAMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGF 533

Query: 545 LHGRFNAAHIIDSLY 559
                + A ++   Y
Sbjct: 534 DPHAIDVAALLQRAY 548


>gi|167035823|ref|YP_001671054.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166862311|gb|ABZ00719.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 550

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 194/551 (35%), Positives = 287/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q 
Sbjct: 2   NLHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQ- 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  A
Sbjct: 61  AGFLANAHKPEFSSHDRYGHRIDLVEFHPAYHVLMRTAVEHGLPSLPWAEP-----RAGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     
Sbjct: 116 HVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  + CFL+PR   D + N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TEKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + ++     ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSLRMGQALEQ-LDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFTELGDGHGDPRLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R        +  L  
Sbjct: 475 KGAFADTGDMQYRARQLTEDIALALQAKLLLEAGNAVVSDAFIGSRLAG-SGRAYGALPR 533

Query: 548 RFNAAHIIDSL 558
             +   ++   
Sbjct: 534 GVDVEALVTRA 544


>gi|283786860|ref|YP_003366725.1| acyl CoA dehydrogenase [Citrobacter rodentium ICC168]
 gi|282950314|emb|CBG89961.1| probable acyl CoA dehydrogenase [Citrobacter rodentium ICC168]
          Length = 542

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 183/529 (34%), Positives = 269/529 (50%), Gaps = 11/529 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +A   +    EL   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPLPLNNSNLFLSDGALREAVAREGAGWDSELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+ N   P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  + 
Sbjct: 59  GRLVNAWPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCTNRVHNLPWEEE----ARAGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P    +W   + S  YD       Q
Sbjct: 115 VARAARFILHAQVEAGTLCPITMTFAATPLLQQMLPAPFSEWLTPLMSDRYDSHLMPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-- 250
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ +  
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAERLEDGTYRLVGHKWFFSVPQSDAHLVLAQAQAR 234

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       + 
Sbjct: 235 GGLSCFFVPRFLPDGRRNAVRLERLKDKLGNRSNASCEVEFDDAIGWLLGEEGEGIRHIL 294

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +   D A+ S   MR + + AI++A +R V G  LIDQP+M++ ++ +AL +   T
Sbjct: 295 KMGGMTRFDCALGSHGLMRRAFSVAIYHAHQRQVFGKALIDQPMMRQLLSRMALQLEGQT 354

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL FRLA ++D  +  ++E   AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 355 ALLFRLARAWDR-RGEAKEQLLARLFTPAAKFAVCKSGIPFVAEAMEVLGGIGYCEESEL 413

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LD+L +L K     E L     +  G        + +  
Sbjct: 414 PRLYREMPVNSIWEGSGNVMCLDILRVLSKHAGAEEMLIGMFSEVRGQDRHFDRAVRQLQ 473

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
             L    +   R +   I L    A + R     +A  + +        
Sbjct: 474 QRLRNPVEEQGRDIARLIYLLGCGARMLRHASPPVAQAWCQMMLDTRGG 522


>gi|325276233|ref|ZP_08142029.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324098633|gb|EGB96683.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 550

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 195/551 (35%), Positives = 288/551 (52%), Gaps = 14/551 (2%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            +HQ +++    NQPP   G N Y  D  L      F +      ++  G        Q 
Sbjct: 2   NLHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQ- 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+R ++  GL    W        R  A
Sbjct: 61  AGFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAEP-----RPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RA+  YL +Q EAG     ++T A++ AL   P + + W PKI + EYDP N     
Sbjct: 116 HVARASMTYLHSQAEAGSGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRH 175

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  V +G+ +TEK+GGTD+ A T++   +        Y L GHKWF S+PM DAF+ LAQ
Sbjct: 176 KAGVILGMAMTEKQGGTDVRANTTRAYSVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQ 235

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  + CFL+PR   D S N    QRLKNK+GN SNA+ E+EF     +++G+       
Sbjct: 236 TEKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPT 295

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +   D  + S + MR +L +A H+   R V G +L +QP+M+  +AD+AL+  A
Sbjct: 296 IIEMVAMTRFDCMVGSSALMRQALTQATHHCAYRKVGGRVLNEQPLMQNVLADLALESEA 355

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A ALS R+  + ++ +   ++A +AR++  + KYW CK APA+I EA EC+GG+GY+E+ 
Sbjct: 356 ALALSLRMGQALEQLED-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDS 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITIL 487
            + R YRE+P NS   GSGN   LDVL  L K   + + LF+ L    G       I  L
Sbjct: 415 ILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLAAHIGNL 474

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
           + + +   + +  AR LTE IALA  A  L  AG   ++D F+ +R        +  L  
Sbjct: 475 KGAFADTGDMQYRARQLTEDIALALQAKLLLEAGNALVSDAFIGSRLAGG-GRVYGALPR 533

Query: 548 RFNAAHIIDSL 558
             +   ++   
Sbjct: 534 GVDVQALVARA 544


>gi|94309106|ref|YP_582316.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93352958|gb|ABF07047.1| isovaleryl CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 561

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 183/541 (33%), Positives = 281/541 (51%), Gaps = 16/541 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     N + SD  L A +       H + L   G  +     Q  A  A
Sbjct: 12  AQTHTVFNQVPDLAHYNLFESDPGLRAALDRLGGAWHADTLAAFGARLGDPEVQAWAADA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N  TP+LH +   GER D+VEFHP+WH LL       L    + +      R      R 
Sbjct: 72  NRFTPELHTHSRTGERIDQVEFHPSWHNLLALLRSQQLQAMPFAQP-----RPGVWAART 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              +L AQ+E+G L   ++T AS+  L   P +  D  P++++ E+D  +     KT+V 
Sbjct: 127 VGYFLQAQVESGSLCPTTMTLASIPVLRKEPALFCDLEPRLYATEHDARDLPWRGKTAVM 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDG---IYCLSGHKWFLSSPMSDAFIMLAQ---VE 250
           IG+G+TEK+GG+D+ A T+    +  DG    Y L+GHKWF S+PM DA +++A+    +
Sbjct: 187 IGMGMTEKQGGSDVRANTTVALPVRGDGRGAEYALTGHKWFFSAPMCDAHLVVARMGAAD 246

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR  +DGS N +  QRLK+K+GNRSN++ E+EF  T G L+G+       + 
Sbjct: 247 GPLSCFFVPRFRDDGSKNPILIQRLKDKLGNRSNSSSEVEFRGTTGILIGEEGRGIPTII 306

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD  I S + +R  L +A+H+AR R   G +L DQP+M+  +AD+ L+  AAT
Sbjct: 307 EMATNTRLDCVIGSAALLRAGLVQALHHARHRMAFGRLLADQPLMRNVLADLTLESEAAT 366

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +   LA++F+ A      AA+ R+M P  K+W CK A     E ME  GG+GY+E+  +
Sbjct: 367 LMMMALAHAFEHADDDPLAAAWKRVMTPAAKFWICKRALEATGETMEVWGGNGYVEDGPM 426

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILR 488
           AR YRE+P NSI  GSGN M LDVL  L++      ++   L +  +  ++ +  +  L+
Sbjct: 427 ARLYREAPVNSIWEGSGNIMCLDVLRALQRDPGDGARILQDLARLSNGDAAVRAELASLQ 486

Query: 489 DSI-SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
             +    ++ +  AR   + + L + AA +   G  + A +F+ +R           L  
Sbjct: 487 AMLRGPAEQLETSARRFAQGLVLTAQAALMIAHGNAESAALFVASRLGRQHGRVFGTLDA 546

Query: 548 R 548
            
Sbjct: 547 D 547


>gi|229494713|ref|ZP_04388471.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229318380|gb|EEN84243.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 563

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/557 (34%), Positives = 288/557 (51%), Gaps = 23/557 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N +  D++LV  +A         EL  +GE V S   Q  A +
Sbjct: 14  PHRTHAVLNQSVPRTDVNEFVLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W        +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAWADP-----KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L +Q+E GH    S+T A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAAIWTPRALSRSYTPELDAPG-KASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 AGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  +  +E A+ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATITALRLARAQDE-DANEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITI 486
            +AR YRE P  ++  GSGN + LDVL  + +  +        +    G++    + +  
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDREINLARGNNPVLDQHLDR 486

Query: 487 LRDSIS-----LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           +R  +         + +  AR + E +ALA  A+ + R      +D F+  R   +    
Sbjct: 487 VRRQLGELATMAPADAQFRARTVVEAMALALQASLMVRHSPAASSDAFIAARLGADRGHE 546

Query: 542 HCMLHGRFNAAHIIDSL 558
           +  L    + A I+   
Sbjct: 547 YGTLPVGTDFAGILARA 563


>gi|121604749|ref|YP_982078.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593718|gb|ABM37157.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 550

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 194/547 (35%), Positives = 291/547 (53%), Gaps = 15/547 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP   +  N +  +  L   +  N P +    L  LG  + +   Q  AR+AN 
Sbjct: 4   THEVFNQPEPLVNYNLFEGNQPLRDALKFNAPGLDTAGLMQLGARLGTADMQTHARLANV 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+LH +   G R D+VEFHP++HAL+  ++  GLH + W     P      H  RAA 
Sbjct: 64  HAPELHTHDRFGRRIDQVEFHPSYHALMTEAVGAGLHGTPWAHHESPS----PHVERAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L  +LE   L   S+T A   AL   P ++ DW+P + SR+YDP  K    K  V +G
Sbjct: 120 FMLFTELEPSSLCPISMTYAVTPALRGNPAIYADWSPGLTSRQYDPMLKVWSDKPGVTMG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +G+TEK+GG+D+ A T++      DG    + ++GHKWF S+PM DAF++LAQ    + C
Sbjct: 180 MGMTEKQGGSDVRANTTRAVPDGTDGWGQRFAVTGHKWFFSAPMCDAFLILAQAPAGLSC 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +PR+L DGS N +  QRLK+K+GN++NA+ E+EFS    +L+G+       +  M  +
Sbjct: 240 LFLPRVLPDGSLNAIRIQRLKDKLGNKANASSEVEFSAASAWLVGEEGRGVPQILAMGSM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ +   MR +L+ A+++  +R   G  LI QP+M+  +AD+A++  AA ALS R
Sbjct: 300 TRLDCALGTSGLMRQALSLALNHTAQRSAFGQPLIGQPLMRNVLADLAIESEAACALSIR 359

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IAR 432
           LA  FD  ++ +   A +R++ P+ K+W CK   A   EAMEC+GG+GY+EE     +AR
Sbjct: 360 LARCFDH-QNDAHGQALSRLLTPVAKFWICKRGSAFAQEAMECLGGNGYVEEGGEGIMAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  G+GN M LD+L  L K       L   L    G+            + 
Sbjct: 419 IYREMPVNSIWEGAGNIMALDLLRALRK-PAAVAALTQELRAAKGAHPALDRMARALPVR 477

Query: 493 LCK-EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           L +   +  AR L +++ALA  AA L +     +AD F ++R   +   T   L    + 
Sbjct: 478 LEEMASEPQARRLAQEVALALQAALLCQTAPRAVADAFCDSRLAGHWGQTFGTLASSTDF 537

Query: 552 AHIIDSL 558
             II+  
Sbjct: 538 DRIIERA 544


>gi|332992135|gb|AEF02190.1| acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 562

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 188/543 (34%), Positives = 276/543 (50%), Gaps = 11/543 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE----LELLGEYVLSCTAQELA 74
            ++    NQP      N +  D LL   +    +  H +    L++ G+ V      E  
Sbjct: 15  FNTHVVENQPLPLPAYNLWQDDPLLKCAVMANVTSPHADVALQLDVFGQ-VAGFELMEHG 73

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN N P+ H +   G R D V FHP++HAL+  ++   +H   W        ++ AH 
Sbjct: 74  ELANKNKPEFHPFDRYGRRIDDVAFHPSYHALMSAAMQGNVHNYSWQNE----SQQGAHV 129

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           IRAA +++  Q +AG     ++T A++ AL     +   W  K+   +YD        K 
Sbjct: 130 IRAALIFMQYQADAGTTCPLTMTHAAIPALRQAKGLPDYWVNKVVHGQYDDRTLPAEHKH 189

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            ++IG+G+TEK+GG+D+   T+   K  DG Y + GHK+F S+PM D  ++LAQ    +G
Sbjct: 190 GLSIGMGMTEKQGGSDVRRNTTTATKQEDGSYRIVGHKFFFSAPMCDGHLILAQTGAGLG 249

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL+PR++ DG+ N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  
Sbjct: 250 CFLLPRVMPDGTLNEVRIQRLKDKLGDWSNASSEVEFQGATAYLIGEEGKGVRVIIDMVS 309

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  LD  I S + MR  L +A H+   R   G  LIDQP+M+  IAD+ L+  A+ AL+ 
Sbjct: 310 LTRLDCMIGSSATMRQGLVQAYHHVSNREAFGATLIDQPLMQNVIADLTLECTASLALTM 369

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A + D +K+  +EAA ARI   I KYW CK  PA I EA EC+GG GY+EE  + R Y
Sbjct: 370 RVARAVDASKTNPKEAALARIATAIGKYWICKRTPAFINEAQECLGGIGYVEENILPRLY 429

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSIS 492
           R++P NSI  GSGN   LDVL  L K       LF  L    G +      +  L D+  
Sbjct: 430 RQAPLNSIWEGSGNVQCLDVLRALHKEPESKAALFDLLHSAKGRNACYDNHLQSLLDAFE 489

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
                +  +R +TE  A+A   A L     + +A+ F E R           L       
Sbjct: 490 DTATLEIRSRLITEHTAIAMQGALLLNESDSVMANTFCEARLGKQQGLAFGTLPANAPFL 549

Query: 553 HII 555
            II
Sbjct: 550 DII 552


>gi|307731335|ref|YP_003908559.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307585870|gb|ADN59268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 569

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 200/571 (35%), Positives = 297/571 (52%), Gaps = 30/571 (5%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQE 72
           Q H    +    NQ P     N +S+D  L   +    +  H++ L   G  + +     
Sbjct: 2   QRHSFGQTHEVTNQVPPLADYNLFSTDVALANALERDGAAWHRDALLRHGAALSTPDTLA 61

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA +AN +TP+L  + P GER D +EFHPAWH LL     +GLH   +        +  A
Sbjct: 62  LAELANRHTPELVTHSPRGERIDALEFHPAWHELLALLRREGLHALPFSDP-----QPGA 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              R A  +L AQ+E+G L   ++T AS+  L   P++      K+++R +DP +    Q
Sbjct: 117 MAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYARGHDPRDLPLAQ 176

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K S  IG+G+TEK+GG+D+ +  +Q + I+ G     Y L GHKWF S+P  DA ++LA+
Sbjct: 177 KHSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELIGHKWFFSAPQCDAHLVLAR 236

Query: 249 VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               VG  CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + FG ++GD     
Sbjct: 237 THDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGV 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD  I S + MR +L +AIH+AR R   G  L DQP+M+  +AD+AL+ 
Sbjct: 297 PTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALES 356

Query: 367 AAATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            AAT L  RLA +F++            + +   E A+ RI+ P  KYW CK       E
Sbjct: 357 EAATVLFMRLARAFEQSADAAPASSAASSTATLAERAWRRIVTPAAKYWVCKRTLEFTGE 416

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           AME  GG+GY+E   +AR YRE+P NSI  GSGN M LDVL  +E+     + LF+  + 
Sbjct: 417 AMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAQWQA 476

Query: 475 DLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           D  +       + + + +L    +  +  AR + ++I L + A  L       +A+ F+ 
Sbjct: 477 DAAAHPALGAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVAHAPAAVAEAFIA 536

Query: 532 NRFLDNCHST---HCMLHGRFNAAHIIDSLY 559
            R  D C  +   +  L    + A II+  +
Sbjct: 537 TRLADGCGESGRVYGTLPATLDHAAIIERAF 567


>gi|92114944|ref|YP_574872.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91798034|gb|ABE60173.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 550

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 189/542 (34%), Positives = 279/542 (51%), Gaps = 9/542 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP+    +    D  L   L    P+ V + L  L       + Q LA  AN+
Sbjct: 12  THDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANH 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  +   G R D+V + PA+H L+  +   G H   W+           H+   A 
Sbjct: 72  YPPELRTFDRHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHE-----GAGGHQAHIAA 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           LYL+ Q+E G     ++T A+   L     V   W P++ + +YDP       K +   G
Sbjct: 127 LYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLATWGPRLLAHDYDPRALPIGDKRAATFG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+ + T++    +DG   L+GHKWF S+PMSDAF+ LA+ E  +GCFLVP
Sbjct: 187 MAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGIGCFLVP 246

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG  NG+  QRLK+K GNR+NA+ E+E+++ +   +G        + DM     LD
Sbjct: 247 RFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLD 306

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A      MR +L EA H+A+ R   G  L DQP+M+R IAD+AL+  A+ AL  R A +
Sbjct: 307 AATAPAGMMRQALREAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARA 366

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD A     E A AR++  + K+W  K  PA +AEAMEC+GG GY+EE  +AR YRE+P 
Sbjct: 367 FDGAPHDDHERALARLLPALAKFWHNKRGPAFMAEAMECLGGIGYVEEAPLARLYREAPV 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISLCKE 496
           NSI  GSGN M LDV+ +L +       L   L    G+     + +  + R   +  + 
Sbjct: 427 NSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRLDATPET 486

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  AR+LT+++A    AA L R   N + + F   R  D       +L  +   A I+ 
Sbjct: 487 LEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAPLAAILA 546

Query: 557 SL 558
            +
Sbjct: 547 RI 548


>gi|238787549|ref|ZP_04631347.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC
           33641]
 gi|238724336|gb|EEQ15978.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC
           33641]
          Length = 557

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 184/536 (34%), Positives = 276/536 (51%), Gaps = 20/536 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   +         ++L  +G  + S  + EL R+AN
Sbjct: 18  QTHLVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLAN 77

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAA
Sbjct: 78  TNPPELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  S+  L  T P     W P + S  YD       +K  + 
Sbjct: 134 RFILHAQVEAGSLCPITMTFGSIPLLQQTLPSQFHSWLPSLLSDRYDSHQVVATEKRGLL 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 194 IGMGMTEKQGGSDVLSNTTRAEPLEVRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 254 SCFFLPKILPDGTYNAVRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMG 313

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 314 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALL 373

Query: 374 FRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            RLA++    K+   +E  ++R++ P  KY  C +  A +AEAME +GG GY E+  + R
Sbjct: 374 MRLASAM--GKTYDLQEQIFSRLLTPAAKYRVCGLGCAFVAEAMEVLGGIGYCEQSELPR 431

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            YRE P NSI  GSGN M LDVL  L K     + L        G +    +    L+  
Sbjct: 432 LYREMPVNSIWEGSGNIMCLDVLRTLRKLPTALDMLQQDFYPIRGQNRLFDRAWRQLQQR 491

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           +   KE++G A  LT+++     AA L R     +AD +   R   +    + ML 
Sbjct: 492 LKNPKEEQGRA--LTQQLFDLCCAAQLLRFASPPLADAWC--RMTLDHRDQY-MLP 542


>gi|319442251|ref|ZP_07991407.1| isovaleryl CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 548

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 191/555 (34%), Positives = 286/555 (51%), Gaps = 26/555 (4%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ    + +N ++ D  LV  +  F P      L L+G  V + + Q  A +AN 
Sbjct: 3   THTVFNQSAPRVDINEFTCDPALVEAVDTFAPDADSYRLGLIGAEVGTASYQHDADLANR 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
            TP   ++   G R D+VEFHP++H ++  S++ GLH S W           A+  RAA 
Sbjct: 63  ITPVHTSHDRWGNRVDEVEFHPSYHRIMGFSVNQGLHTSAWAHP-----GPGANVERAAG 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L++Q+EAGH    S+T A + AL  +P + + W PK+ S  YDP  + P  K+S   G
Sbjct: 118 FMLVSQIEAGHGCPVSMTHAVVPALRKSPEIAEFWEPKLLSTSYDPELRDPATKSSAIFG 177

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250
           + +TEK+GG+D+ A T++    +DG + L+GHKWF S+P SDAF++LAQ          +
Sbjct: 178 MAMTEKQGGSDVRANTTRATSNADGTWSLTGHKWFCSAPQSDAFLVLAQTGEASGSGNAD 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CFLVPR+L  G  N    QRLK+K+GNRSN++ E+E   T G+L+G+       + 
Sbjct: 238 QALSCFLVPRILPGGGRNAFFIQRLKDKLGNRSNSSSEIELDGTVGWLVGEEGRGVPTII 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD    S +GMR  +AEA  +AR R   G  LIDQP M   IAD+ ++  AAT
Sbjct: 298 EMVNRTRLDCIFGSAAGMRQGVAEAAWHARHRAAFGATLIDQPAMANVIADLQVESEAAT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + RLA + D+         + R+   + KYW CK       E++EC+GG+GY E   +
Sbjct: 358 WTAMRLAAAHDDDNLED----FRRLATAVAKYWVCKRGTHHAYESLECLGGNGYTELFPL 413

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVI 484
           AR  RE+P N++  GSGN + LDVL  L +     E   + + + +G   +      ++ 
Sbjct: 414 ARRLREAPVNAVWEGSGNVIALDVLRALARQPEAGEAFVAEMSRSVGVDERYDAQFNRMT 473

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTHC 543
           T+L+D+ S   E   LAR L E +AL   A  L       +A  FL  R         + 
Sbjct: 474 TLLKDAASSPAEAPALARRLIESLALTLQAQTLLTHAPAPVASAFLAGRVDPMTRGMEYG 533

Query: 544 MLHGRFNAAHIIDSL 558
            L    +   ++D  
Sbjct: 534 TLPSGVDLTALVDRA 548


>gi|121609781|ref|YP_997588.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554421|gb|ABM58570.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 559

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 195/557 (35%), Positives = 296/557 (53%), Gaps = 21/557 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-HKELELLGEYVLSCTAQELARM 76
           P+ +    NQ   ++ +N ++++  L   +    + +    L  LG  + S   QE AR+
Sbjct: 5   PASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQEHARL 64

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN + PQLH +   G+R D VEFHP++HAL+  ++  GLH + W R+        AH  R
Sbjct: 65  ANTHKPQLHTHDRFGQRSDMVEFHPSYHALIGAALRHGLHATAWTRT--GAAATHAHTER 122

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L  + E   L   S++ A + AL     +  DW   +    YDP      QK+++
Sbjct: 123 AAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADWHTGLAGTRYDPRLVPYTQKSAL 182

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS-DGI---YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
            +G+G+TEK+GG+D+ A T+Q      D     Y L+GHKWF S+PM DAF++LAQ  G 
Sbjct: 183 TMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAPGG 242

Query: 253 VGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + CF +PR+L  G       N L  QRLK+K+GN +NA+ E+EF +   + +G+      
Sbjct: 243 LSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRGVA 302

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M I+  LD A+ +   MR +LA A+++AR+R   G  LIDQP+M+  +AD+AL+  
Sbjct: 303 QILEMGIMTRLDCALGTSGLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALESE 362

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AATALS RLA++FD  +    EA  AR++ P+ K+W CK       EAMEC+GG+GY+EE
Sbjct: 363 AATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVCKRGSVFAQEAMECLGGNGYVEE 422

Query: 428 RS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
                +AR YRE P NSI  G+GN M LD+L  L +  +    L   L    G+     +
Sbjct: 423 GGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSA-AALADELAPARGA--HPAL 479

Query: 485 TILRDSISLCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
             +  ++ L  E    +  AR L + +ALA  AA LYR+    +   F  +R   +    
Sbjct: 480 DRMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYG 539

Query: 542 HCMLHGRFNAAHIIDSL 558
              L    +   ++   
Sbjct: 540 FGTLGAGIDFEGLLARA 556


>gi|254503843|ref|ZP_05115994.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439914|gb|EEE46593.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 559

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 215/540 (39%), Positives = 314/540 (58%), Gaps = 7/540 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P + G N  + D LL+A + A+  +   K++   G  V +    EL R AN 
Sbjct: 22  THDVFNQAPPYGGSNLAAGDPLLLATVSAHVSAWELKDVLAHGAEVGAEAFLELGRQANI 81

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P L  +   G R D+VEFHPA+H L+  S   G+H ++ D             +RAA+
Sbjct: 82  HLPALKTHDRHGRRLDQVEFHPAYHDLMAHSFSAGMHSALLDGGVSTQ------LVRAAK 135

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +L +Q E GH    ++T+A+   +   P V  D  PK+ +R YDP      +KT + IG
Sbjct: 136 FFLTSQAETGHTCPITMTNAAAAVMAQYPDVCADLLPKMQTRTYDPRFLPMHEKTGITIG 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GGTD+ AI+S  +  + G Y ++GHKWF S+PM DAF++LA+      CFL+P
Sbjct: 196 MGMTEKQGGTDLRAISSTAEAGNQGSYAITGHKWFFSAPMCDAFLVLAKTANGPSCFLIP 255

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  NGL +QRLK+K+GN+SNA+ E+EF    G+LLGD       + DM     +D
Sbjct: 256 RILADGRVNGLRFQRLKDKLGNKSNASSEVEFHRAEGYLLGDEGRGIATIIDMVTPTRID 315

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S   MR +++ A+H+ R R   G  LIDQP+M   +AD+ALD+AAATAL+ RL  +
Sbjct: 316 CALGSAGQMRAAVSRAVHHCRHRKTFGAYLIDQPLMTAVLADMALDVAAATALALRLVRA 375

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + ++   EAAYAR++ P  KYW CK  PA+  EAMEC+GG+GY+E+  +AR YR++P 
Sbjct: 376 AAKVETDPVEAAYARLLTPAIKYWICKTGPALTYEAMECLGGNGYVEDYDMARIYRDAPV 435

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           N I  GSGN M LDVL  L +       + S L +  G+S     + L    +    D  
Sbjct: 436 NPIWEGSGNVMALDVLRALGRHPEAPNLVLSELSKSGGASLSAACSGLPSLAAQALADPA 495

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            AR LTE++AL ++ AAL    ++D+AD F + R      ST+ +L    +AA I++SLY
Sbjct: 496 HARVLTERLALTAAVAALKELQLDDVADAFAKTRLSGGWRSTYGILPAGIDAAGILESLY 555


>gi|107024480|ref|YP_622807.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116688141|ref|YP_833764.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105894669|gb|ABF77834.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116646230|gb|ABK06871.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 550

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 183/555 (32%), Positives = 288/555 (51%), Gaps = 19/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L   +A         +L+  G  + S    +LA 
Sbjct: 1   MTDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTAQLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN +TP+LHA+   G R D+V+FHPAWHALL +  H+G     +        R+     
Sbjct: 61  EANQHTPELHAFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRDP-----RRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K +
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRA 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           +  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E 
Sbjct: 176 IWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEA 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GSPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L+ RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 SLAMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITIL 487
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+     +  +  L
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDELA-DLGAGEPRIRAALDGL 473

Query: 488 RDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCM 544
           R  ++   +  +   R   +++A+ + A  L R     ++D F+  R    +        
Sbjct: 474 RAMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVSDAFVATRLAAPDWGRIAGGF 533

Query: 545 LHGRFNAAHIIDSLY 559
                + A ++   Y
Sbjct: 534 DPHAIDVAALLQRAY 548


>gi|322831165|ref|YP_004211192.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp.
           Y9602]
 gi|321166366|gb|ADW72065.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp.
           Y9602]
          Length = 543

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 188/537 (35%), Positives = 278/537 (51%), Gaps = 16/537 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMAN 78
           ++    NQP      N + SD+ L   ++   +    + L  LG+ + S  + EL R+AN
Sbjct: 4   ETHRVFNQPKPLSNSNLFLSDTPLREAVSRQQAGWDADVLASLGQQLGSAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P L  Y   GER D V FHPAWH L++  I + +H   W        R  +   RAA
Sbjct: 64  TNPPDLLRYDTTGERLDDVRFHPAWHLLMQGLIANRVHNLPWQED----ARIGSVVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L  Q+EAG L   ++T  ++  L    P     W   + S  YDP  ++  QK  V 
Sbjct: 120 RFILHGQVEAGTLCPVTMTFGAIPLLQKYLPPEFSGWMKPLLSDRYDPHLQSGDQKKGVL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++      + S   Y L GHKWF S P SDA ++LAQ +G +
Sbjct: 180 IGMGMTEKQGGSDVLSNTTRATALEGRGSGKPYHLVGHKWFFSVPQSDAHLVLAQTDGGL 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF N  G+LLG+       +  M 
Sbjct: 240 SCFFLPRVLPDGTRNAIRIERLKDKLGNRSNASSEVEFQNATGWLLGEEGEGVRHILKMG 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S + MR +L+ A+++A +R V G  LI+QP+M++ ++ +AL +   T L 
Sbjct: 300 GHTRFDCALGSHAMMRRALSVALYHAFQRQVFGKPLIEQPLMRQTLSRMALLLEGQTMLL 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA + D A+    E    R+M P  K+  C+     +AEAME +GG GY E+  + R 
Sbjct: 360 MRLAAASD-AQDNPAEKLLCRLMTPAAKFEVCRQGMPFVAEAMEVLGGIGYCEDSELPRL 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           YRE P NSI  GSGN M LDVL  L+K     E +   L Q  G +        +    L
Sbjct: 419 YREMPVNSIWEGSGNVMCLDVLRTLKKLPASAEMVQQILHQARGQNRVFDRASRQFLQRL 478

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHSTHCMLHGRF 549
            + ++   R+LT ++    +A  +       +AD +   R  LD    T  +L  R 
Sbjct: 479 RRPEEAQGRWLTGQLFNLLTATQMLEFASPPLADAWC--RLVLDPRGET--LLPERL 531


>gi|326330029|ref|ZP_08196343.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325952237|gb|EGD44263.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 551

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 188/547 (34%), Positives = 288/547 (52%), Gaps = 10/547 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMA 77
           SD     NQ P   G N  + D+ L  A++ +        L  LG    S  AQE  R+A
Sbjct: 4   SDIRRVTNQAPPLAGHNVVTGDAALSAAVLRHADEETLDSLVSLGAEAGSAEAQEHGRLA 63

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L  Y   G R D+V FHP+WH L+ R++  GL  + W  +        AH  RA
Sbjct: 64  NRFHPELVPYDRYGNRIDEVSFHPSWHWLMERAVGHGLAAAPWAPAGAGDEAGHAHVRRA 123

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A     +Q E GHL   S+T A++ AL     +  +W P++ S  YD   + P +K    
Sbjct: 124 AGFLAWSQTEPGHLCPISMTYAAVPALRADESLAAEWVPRLASTIYDFGLRDPAEKLGAL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+G+TEK+GG+D+    ++ + +   +Y L GHKWF S+PM+D F++LAQ    + CFL
Sbjct: 184 AGMGMTEKQGGSDVRQNITEARPLGGDVYELHGHKWFTSAPMNDVFLVLAQAPDGLTCFL 243

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR+L  G  N L   RLK+K+GNRSNA+ ELE   T  + LG        + +M     
Sbjct: 244 LPRVLPGGERNRLDVVRLKDKLGNRSNASAELELRGTTAYRLGAEGRGVRTIIEMVAATR 303

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S + MR ++AEA  +   R   GG L D+P+M+  +AD+A++  AATAL+ RLA
Sbjct: 304 LDCVLGSAALMRRAVAEASWHVAHRSAFGGTLADKPLMQNVVADLAVESEAATALAMRLA 363

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D      E+A     + P+ K+W CK  PA +AEA+EC+GG+GY+EE  +   +RES
Sbjct: 364 AAVDRPDDLHEQALRRIGL-PLAKFWVCKRTPAHVAEALECLGGNGYVEESVMPLLFRES 422

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV------ITILRDSI 491
           P NS+  GSGN   LDVL  +++  ++ +   + +    G+  +        + +L +S+
Sbjct: 423 PLNSVWEGSGNVNALDVLRAIQREPSVLDAWITEVGSAKGADRRYDRAVDSTLALLGESM 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              +E +  AR L   +A     + L R G  ++AD+F  +R   +   T+ ML G  + 
Sbjct: 483 GSPEELERSARRLAGSMAALLQGSLLVRYGSEEVADIFCASRLSGH-GGTYGMLAGG-DQ 540

Query: 552 AHIIDSL 558
             ++   
Sbjct: 541 KAVVQRA 547


>gi|238028894|ref|YP_002913125.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           glumae BGR1]
 gi|237878088|gb|ACR30421.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1]
          Length = 558

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 195/562 (34%), Positives = 296/562 (52%), Gaps = 20/562 (3%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70
           M+Q   P+ +    NQ P     NA+ +D  L + +    +  H+  L   G  + +   
Sbjct: 1   MDQ-QAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADT 59

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             LA +AN + P+L  + P GER D +EFHP+WH LL     +GLH   +        R 
Sbjct: 60  LALAELANRHPPELATHSPRGERLDALEFHPSWHQLLALLRGEGLHALPFSEP-----RA 114

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A   R A  +L AQLE+G L   ++T AS+  L   P +      ++++RE+DP +   
Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRERLYTREHDPRDVPL 174

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIML 246
             K S+ +G+G+TEK+GG+D+ +  ++   +        Y L GHKWF S+P  DA ++L
Sbjct: 175 AAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVL 234

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+      + CF VPR   DG+ N +  QRLK+K+GNRSNA+ E+EF + +G ++G+   
Sbjct: 235 ARSAEHAGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGR 294

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + +M  L  LD  I S + MR +L +AIH+AR RH  G  L DQP+M+  +AD+AL
Sbjct: 295 GVPTIIEMANLTRLDCVIGSAALMRAALVQAIHHARHRHAFGRRLADQPLMRNVLADLAL 354

Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +  AAT L  RLA++ +    R  EA  + RI+ P  K+W CK A     EAME  GG+G
Sbjct: 355 ESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRALEFTGEAMEVWGGNG 414

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---G 480
           Y+E   +AR YRE+P NSI  GSGN M LDVL  +E+  +    L +    DLG      
Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVR 474

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC-- 538
           + +  +L    +  +  +  AR + ++IAL + AA L R    ++AD F+  RF      
Sbjct: 475 RALDDLLATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPE 534

Query: 539 -HSTHCMLHGRFNAAHIIDSLY 559
               +  L   F+   ++   +
Sbjct: 535 TGRVYGTLPASFDHGALVARAF 556


>gi|111020455|ref|YP_703427.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819985|gb|ABG95269.1| probable AidB protein [Rhodococcus jostii RHA1]
          Length = 563

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 198/563 (35%), Positives = 293/563 (52%), Gaps = 24/563 (4%)

Query: 13  NQVH-QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTA 70
           N  H  P  +   LNQ      +N ++ D++L   +          EL  +G  V S T 
Sbjct: 8   NVTHPAPHRTHTVLNQSVPRTDVNEFTLDTVLSEGVRRHDAGWATGELTGIGALVGSATF 67

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q  A +AN   P+L  +   G R D+VE+HPA+H ++  ++  G H S W        + 
Sbjct: 68  QHDAELANTIIPELKTFDRWGNRIDEVEYHPAYHRIISAAVAHGAHTSAWADP-----KP 122

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A+  RAA   + AQ+E GH    S+T+A++ +L   P V   W P+  SR Y P   AP
Sbjct: 123 GANVARAAAFMMFAQIEPGHSCPISMTNAAIPSLDLQPDVAAIWKPRALSRSYTPELDAP 182

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIML 246
             K S   G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++L
Sbjct: 183 G-KASAIFGMSMTEKQGGSDVRANTTVAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVL 241

Query: 247 AQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           AQ EG  G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+ 
Sbjct: 242 AQAEGAGGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEP 301

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+
Sbjct: 302 GRGVRTIIEMVARTRLDCVLGSTAGMRQSVAEAVWHARHRSAFGKVLADQPAMTSVLADL 361

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL+  AAT  + RLA + DE  +  +E ++ R+   + KYW CK  P    EA+EC+GG+
Sbjct: 362 ALESEAATVTALRLARAHDE-DASEQERSFRRLATAVAKYWICKRGPHHAYEALECLGGN 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-- 480
           GY E+  +AR YRE P  ++  GSGN + LDVL  + +  +      + +    GS+   
Sbjct: 421 GYTEDFPLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNAVL 480

Query: 481 -KKVITILRDSISLCKEDKG----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
            + +  + R    L  ED       AR + E +ALA  A+ L R     +AD F++ R  
Sbjct: 481 DEHLDRVRRQLGELATEDPARAQSRARTVVESMALALQASLLTRFSPAAVADTFIDARLG 540

Query: 536 DNCHSTHCMLHGRFNAAHIIDSL 558
            +    +  L    +   I+   
Sbjct: 541 PDRTHEYGTLSTSADLGSILGRA 563


>gi|206558451|ref|YP_002229211.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198034488|emb|CAR50353.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 550

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 182/555 (32%), Positives = 285/555 (51%), Gaps = 19/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L   +A         +L+     + S     LA 
Sbjct: 1   MTDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYAARLGSADTARLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN +TP+L+ +   G R D+V+FHPAWHALL +  H+G     +        R+     
Sbjct: 61  EANRHTPELNTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRD-----ARRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K +
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRA 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           +  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E 
Sbjct: 176 IWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEA 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GSPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L+ RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 SLAMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITIL 487
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L  DLG+     +  +  L
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDELA-DLGAGEPRIRAALDGL 473

Query: 488 RDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCM 544
           R  ++   +  +   R   +++AL + A  L R     +AD F+  R    +        
Sbjct: 474 RAMLAAPADTLEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGF 533

Query: 545 LHGRFNAAHIIDSLY 559
                + A ++   Y
Sbjct: 534 DPHAIDVAALLQRAY 548


>gi|226309402|ref|YP_002769362.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188519|dbj|BAH36623.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 563

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 193/557 (34%), Positives = 287/557 (51%), Gaps = 23/557 (4%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARM 76
           P  +   LNQ      +N +  D++LV  +A         EL  +GE V S   Q  A +
Sbjct: 14  PHRTHAVLNQSVPRTDVNEFQLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L  +   G R D+VE+HP++H ++  ++  G H S W        +  A+  R
Sbjct: 74  ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAWADP-----KPGANVAR 128

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA   L +Q+E GH    S+T A + +L   P V   W P+  SR Y P   AP  K S 
Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAALWTPRALSRSYTPELDAPG-KASA 187

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             G+ +TEK+GG+D+ A T+  +    G     Y L+GHKWF S+PMSDAF++LAQ EG 
Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247

Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            G    CFL+PR+L DG+ N    QRLKNK+GN+SNA+ E+E   T G ++G+       
Sbjct: 248 AGEGLSCFLLPRILPDGTRNIFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  + S +GMR S+AEA+ +AR R   G +L DQP M   +AD+AL+  A
Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT  + RLA + DE  +  +E A+ R+   + KYW CK  P    EA+EC+GG+GY E+ 
Sbjct: 368 ATITALRLARAQDE-DADEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITI 486
            +AR YRE P  ++  GSGN + LDVL  + +  +        +    G++      +  
Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDHEVNLARGNNPVLDHHLDR 486

Query: 487 LRDSIS-----LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           +R  +         + +  AR + E +ALA  A+ + R      +D F+  R   +    
Sbjct: 487 VRRQLGELATMAPADAQLRARTVVEAMALALQASLMVRHSPAASSDAFIAARLGADRGHE 546

Query: 542 HCMLHGRFNAAHIIDSL 558
           +  L    + A I+   
Sbjct: 547 YGTLPVGTDFAGILARA 563


>gi|149917304|ref|ZP_01905803.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149821911|gb|EDM81305.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 561

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 188/548 (34%), Positives = 282/548 (51%), Gaps = 17/548 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQPP F G+N ++SD  L + +A      H + L   G  V S         AN 
Sbjct: 12  THAVANQPPAFEGVNLWASDRALRSAVAREGGAAHADALHGFGARVGSAEVTAWGFEANR 71

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  +   G+R D+V +HP++H L+  ++  G+    W  +  P      H   AA 
Sbjct: 72  ARPELLTFDRYGQRVDEVRYHPSYHRLMALAVEAGMPSVAWTEADTPSG----HVAHAAY 127

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++MAQ E G     S+T A + AL   P + +   PK+ +R YDP  K   +K  + +G
Sbjct: 128 EFMMAQAEPGVCCPLSMTYAVVPALRHEPALAEALVPKLSARVYDPEFKPMTEKAGLTMG 187

Query: 200 LGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           + +TEK+GG+D+ A T+Q  ++   D  Y L GHKWF S+PMSDAF+ LAQ  G + C L
Sbjct: 188 MAMTEKQGGSDVRANTTQAHRLGGSDTDYELVGHKWFCSAPMSDAFLTLAQAPGGLTCLL 247

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR   DG+ N    QRLK+K+G+ +NA+ E+E++ T+   +G+       + +M     
Sbjct: 248 VPRWRPDGTRNPFFIQRLKDKLGDHANASSEIEYAGTYARRVGEEGRGVRTIIEMVHHTR 307

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  +M    +R ++A A  +A+ R   G  LIDQP+M+  +AD+ ++  AATAL+ R+A
Sbjct: 308 LDCIVMPAGMLRQAVANACWHAQHRAAFGAKLIDQPLMREVLADLIVESEAATALAMRVA 367

Query: 378 NSFDEAKSRS----EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            SFDEA           AY+R+  P+ KYW  K  P  + EAMEC GG+GYIEE  + R 
Sbjct: 368 RSFDEAGHDGAVGERARAYSRLATPVAKYWLNKRLPEAVYEAMECHGGAGYIEESVMPRL 427

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +R+SP NSI  GSGN + LDVL  + +  +    +   L    G   +    +  L D  
Sbjct: 428 FRQSPLNSIWEGSGNVICLDVLRAMGREPSCVAAVLEELNASRGGDPRYDAFVAALEDRF 487

Query: 492 SLCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
           +    +      AR L E++ LA  AA L R G   +AD F   R        +  L   
Sbjct: 488 ARVGREPVHPREARQLCERLGLALQAAVLVRHGEPAVADAFCAGRLAGE-GRCYGTLPAG 546

Query: 549 FNAAHIID 556
            +   +++
Sbjct: 547 VDIDALLE 554


>gi|238783563|ref|ZP_04627585.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC
           43970]
 gi|238715618|gb|EEQ07608.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC
           43970]
          Length = 548

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 183/535 (34%), Positives = 278/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   +         ++L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDMALREAVMREHAGWDREDLSLIGLQLGSQESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  I    H   W        R  +   RAA
Sbjct: 68  SNPPELLRYDAVGQRLDQVRFHPAWYVLMQELIKHRAHNLPWQED----ARIGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  + P +  +W P + S  YDP      QK  + 
Sbjct: 124 RFILHAQVEAGSLCPITMTFGAIPLLQQSLPPLFHNWLPPLLSDRYDPHQVVGSQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLEARGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +LLGD       +  M 
Sbjct: 244 SCFFLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDHATAWLLGDEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++++    + E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 MRLARAWEKPHE-AHEQIFSRLLTPAAKYRICGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     + L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPAAIDMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  LT+++     AA L R     +AD +   R   +    + ML 
Sbjct: 483 KTPKEEQGRA--LTQQLFDLCCAAQLLRFASPPLADAWC--RMTLDHRDQY-MLP 532


>gi|119716580|ref|YP_923545.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119537241|gb|ABL81858.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 557

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 196/554 (35%), Positives = 296/554 (53%), Gaps = 17/554 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMA 77
           SD   + NQPP  +G N  ++D  LV  +    S  V ++L  LG    +  A+E   +A
Sbjct: 3   SDIRASANQPPALVGHNVVTADLALVEAVTRHASADVVEDLAALGAEAGTDEAREHGLLA 62

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P+L  Y   G R D+VEFHP+WH L+ R++  GL  + W++         AH  RA
Sbjct: 63  NRNEPRLAPYDRYGNRIDEVEFHPSWHWLMGRAVGHGLAAAPWEQQ--EAGAPHAHVRRA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A     +  EAGH    S+T A++ AL     + K+W P + S  YDP  +    K    
Sbjct: 121 AGFMAWSHTEAGHGCPISMTYAAVPALRADEALAKEWTPLLASTTYDPGLRLATTKAGAL 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GC 255
            G+G+TEK+GG+D+    ++ +   + G Y L GHKWF S+PM+D F++LAQ EG    C
Sbjct: 181 AGMGMTEKQGGSDVRTNVTEARPTSAHGEYTLHGHKWFTSAPMNDMFLVLAQAEGSALTC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VPR+L DG+ N +   RLK+K+GNRSNA+ ELE   T G+ LGD       + +M   
Sbjct: 241 FVVPRVLADGTRNQMDVVRLKDKLGNRSNASSELELDGTVGYRLGDEGRGVRTIIEMVAA 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  + S S MR ++ EA  +A  R   G +L D+P+M+  +AD+A++  AATAL+ R
Sbjct: 301 TRLDCVLGSTSLMRRAVNEASWHAAHRTAFGALLADKPLMQNVLADLAVETEAATALAIR 360

Query: 376 LANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           LA + D     +A   + EAA+ RI  P+ K+W CK  P ++AEA+EC+GG+GY+E+  +
Sbjct: 361 LAAAVDGLGRPDAAEAAHEAAFRRIALPLAKFWVCKRTPFLVAEALECLGGNGYVEDSGM 420

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVI 484
              YRE+P NS+  GSGN   LDVL  L +   + +   + + +  G   +        +
Sbjct: 421 PLLYREAPVNSVWEGSGNVNALDVLRALGREPEVLDAWITEVGRARGGDARLDRAIEDTL 480

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            ++   +      +  AR L  ++AL    A L R    ++ADVF  +R   +       
Sbjct: 481 ALIGSLLGDPDSLEVNARRLASRMALCLQGALLVRFAPPEVADVFCASRLGTSYDGVFGT 540

Query: 545 LHGRFNAAHIIDSL 558
           L G  +   I++  
Sbjct: 541 LDGG-DLRAIVERA 553


>gi|238750080|ref|ZP_04611583.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380]
 gi|238711624|gb|EEQ03839.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380]
          Length = 551

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 183/535 (34%), Positives = 278/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L  +G  + S  + EL R+AN
Sbjct: 12  QTHLVFNQPEPLSNSNLFLSDMALQEAVVREHAGWDGETLAQIGLQLGSQESLELGRLAN 71

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G R D+V FHPAW+ L++  +   +H   W        RK +   RAA
Sbjct: 72  ANPPELLRYDGAGLRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARKGSFVARAA 127

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + + W   + S  YD       QK  + 
Sbjct: 128 RFILHAQVEAGSLCPITMTFGAIPLLQQTLPPLFQGWLSPLLSNRYDSHQIVGNQKRGLL 187

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ +G +
Sbjct: 188 IGMGMTEKQGGSDVLSNTTKAEPLDSRGHGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGL 247

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 248 SCFFLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMG 307

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G +L++QP+M++ ++ +AL +   TAL 
Sbjct: 308 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKVLVEQPLMRQGLSRMALRLEGHTALL 367

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA+++ +A     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 368 MRLASAWGKA-GEPHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 426

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K  N  E L        G +    +    L+  +
Sbjct: 427 YREMPVNSIWEGSGNIMCLDVLRTLRKLPNALEMLQQEFYPVRGQNRLFDRGWRQLQQRL 486

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  +T+++     AA L R     +AD +   R   +    + M+ 
Sbjct: 487 KNPKEEQGRA--ITQQLFDLCCAAQLLRFASPPLADAWC--RMTLDHRDQY-MVP 536


>gi|260219466|emb|CBA26311.1| Protein aidB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 560

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 198/567 (34%), Positives = 297/567 (52%), Gaps = 30/567 (5%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTA 70
           M+       +    NQ          + +  L + +A + P +    L+ LGE + S   
Sbjct: 1   MHSETDFPATHTVFNQAEPLADTQLLAGNRALQSALAFHAPGMDTSALQSLGELMGSRAM 60

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q  AR+AN + P LH++   G R D+VEFHP++HAL+  +   GLH S WD    P   +
Sbjct: 61  QTHARLANTHPPVLHSHDRLGRRVDQVEFHPSYHALMDAAAQAGLHGSPWD----PAAGE 116

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            AH  RAA   L  + E   L   S+T A + AL   P V + WAP + +R YDP  K  
Sbjct: 117 GAHLRRAAAFMLFIEAEPSILCPISMTYAVLPALRGNPAVFEAWAPGLMARAYDPGFKLY 176

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY----CLSGHKWFLSSPMSDAFIML 246
             K  + +G+G+TEK+GG+D+ A T+Q     +  +     L GHKWF S+PM DAF++L
Sbjct: 177 RHKRGLTMGMGMTEKQGGSDVRANTTQAIPDGEDAWGPRFKLLGHKWFFSAPMCDAFLVL 236

Query: 247 AQVEGRVGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           AQ    + CF VPR+L D       G+ N +  QRLK+K+GN +NA+ E+EF +   +L+
Sbjct: 237 AQSPAGLSCFFVPRILPDFADPHSPGTVNAIRIQRLKDKLGNHANASSEVEFQHATAWLV 296

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G        + +M  +  LD A+ +   MR +L+ A+H+  +R   G  LI+QP+M+  +
Sbjct: 297 GVEGRGVPQILEMGTMTRLDCALGTTGLMRQALSIALHHTSQRQAFGKALIEQPLMRNVL 356

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A++  AA AL+ RLA++FD A S   E    R++ P+ KYW CK       EAMEC+
Sbjct: 357 ADLAIECEAACALAMRLASAFDHA-SDPHELLMGRLLTPVAKYWICKRGATFAQEAMECL 415

Query: 420 GGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           GG+GY+EE     +AR YRE P NSI  G+GN M LD+L  L KG        + L ++L
Sbjct: 416 GGNGYVEEGGEGTMARIYREMPLNSIWEGAGNIMALDLLRALRKGDTA-----AALAREL 470

Query: 477 GSSGKKVITILRDSISLCKEDKGL-----ARFLTEKIALASSAAALYRAGMNDIADVFLE 531
             +      + R + SL    + +     AR L + +ALA  AA LY+   + + + F +
Sbjct: 471 APARGAHPALDRLAASLPTRVELMATEMEARRLAQDVALAVQAALLYQTAPSAVFEAFCD 530

Query: 532 NRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           +R   N   +   L    +   I+   
Sbjct: 531 SRLGGNWGYSFGTLGAAVDCDAILQRA 557


>gi|288937519|ref|YP_003441578.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22]
 gi|288892228|gb|ADC60546.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22]
          Length = 545

 Score =  442 bits (1136), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/518 (35%), Positives = 274/518 (52%), Gaps = 9/518 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD+ L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLTWQED----AREGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P + +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPALFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +        +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           L +  +   R +   +    + A + R     +A+ + 
Sbjct: 474 LRRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 511


>gi|294340427|emb|CAZ88808.1| isovaleryl CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 543

 Score =  442 bits (1136), Expect = e-121,   Method: Composition-based stats.
 Identities = 197/547 (36%), Positives = 285/547 (52%), Gaps = 11/547 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQEL 73
           +  P  +    NQ P     N +++D  L   +A        ++L   G  + +  + + 
Sbjct: 1   MTWP--THDVTNQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGTAASYKQ 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN NTP L A+   G R D++EFHPAWHAL+      GLH   W R      +  AH
Sbjct: 59  GRLANQNTPVLRAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWARP-----QPGAH 113

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   L  Q+EAG +   ++T  ++ A+     + +DW P +   EYDP +  P QK
Sbjct: 114 VARAAGFILQTQIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPPAQK 173

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
               IG+G+TEK+GG+D+ + T++ +    G Y L+GHKWF S+P  DA ++LAQ  G +
Sbjct: 174 RGGLIGMGMTEKQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGL 233

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF   +G LLG+       + +M 
Sbjct: 234 SCFFVPRWAPDGSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMG 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               LD  + +   MR +L++A+HYAR R   G  LIDQP+M+  +AD+AL++ AA AL+
Sbjct: 294 TYTRLDCVLGTTGLMRQALSQAVHYARHRQAFGAALIDQPLMRNVLADMALEVEAAIALA 353

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +FD     + ++   R++ P  K+  CK    + AEAME +GG+GY+EE   AR 
Sbjct: 354 LRLAQAFDSQHDEA-QSLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDMQARI 412

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     + L + L Q  G +      +     ++
Sbjct: 413 YREMPVNSIWEGSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSAAL 472

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
                 +  AR LT  + LA  AA L R     IA  F  +R           L    + 
Sbjct: 473 RDTDAQQSRARALTHDLVLALQAALLLRHAPEPIAQAFCASRLGGEWGGGFGTLSKATDF 532

Query: 552 AHIIDSL 558
             ++   
Sbjct: 533 DLLLSRA 539


>gi|78064774|ref|YP_367543.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965519|gb|ABB06899.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 550

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 185/555 (33%), Positives = 288/555 (51%), Gaps = 19/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D  L  ALI         +L+  G  + S     LA 
Sbjct: 1   MTESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN++TP+LH +   G R D+V+FHPAWHALL +  H+G     +  S     R+     
Sbjct: 61  EANHHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRES-----RRGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +    +K S
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSNDYDPRDVPVAEKRS 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           +  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E 
Sbjct: 176 IWFGMGMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEA 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLK+K+GNRSN++ E+E ++ +G +LGD       + 
Sbjct: 236 GSPSCFYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +LS RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 SLSMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITIL 487
           AR +RE+P NSI  GSGN M LDVL  + +  +  E        DLG+     +  +  L
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAISREPDAAEA-LFAELADLGAGEPHIRAALDAL 473

Query: 488 RDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCM 544
           R  ++   +  +   R   +++A+ + A  L R     +AD F+  R    +        
Sbjct: 474 RVMLAAPADTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGF 533

Query: 545 LHGRFNAAHIIDSLY 559
                + A ++   Y
Sbjct: 534 DPHAIDVAALLQRAY 548


>gi|330003382|ref|ZP_08304597.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3]
 gi|328536992|gb|EGF63284.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3]
          Length = 550

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/520 (35%), Positives = 272/520 (52%), Gaps = 9/520 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H    +    NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQ--THTVFNQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +    E+A+AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDR-RDDVRESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +        +  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             L +  +   R +   +    + A + R     +A+ + 
Sbjct: 477 QLLKRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 516


>gi|109900211|ref|YP_663466.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109702492|gb|ABG42412.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 548

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 192/544 (35%), Positives = 285/544 (52%), Gaps = 8/544 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP +    N +S+D +L+  +  N   +    L   G             +AN 
Sbjct: 9   THTVENQPQVLSPYNLWSADRMLMHAVQQNHSDLPTSTLSDFGNIAG-DQLMNAGELANK 67

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N PQ   +   G R D VEFHPA+H L+  ++   +H   W           +H IRAA 
Sbjct: 68  NKPQFQPFDGYGRRIDNVEFHPAYHELMGEAMAAQVHAYSWKNE----STSGSHVIRAAL 123

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L++ +Q +AG     ++T A + AL   P + + W  K+ S EYDP +    QK  + +G
Sbjct: 124 LFMHSQADAGTTCPLTMTHAGVAALKNAPDLPRYWTDKVISGEYDPRSIPASQKRGITLG 183

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GG+D+   T++    +DG Y ++GHK+F S+PM DA ++LAQ    + CFL+P
Sbjct: 184 MGMTEKQGGSDVRRNTTRADIQADGSYRITGHKFFFSAPMCDAHLILAQSTKGLSCFLLP 243

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+LEDGS N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD
Sbjct: 244 RILEDGSLNHVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGRGVPVIIDMVSLTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S S MR +L +A+H+ + R   G  LIDQP+MK  +AD+ L++AA+ AL+ R+A +
Sbjct: 304 CMIGSTSLMRQALVQALHHTQHREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVARA 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A +   EA  +RI   I KYW CK  PA + EA EC+GG GY+EE  + R YR++P 
Sbjct: 364 VDLANTNQHEAHLSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENILPRLYRQAPL 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--ITILRDSISLCKED 497
           NSI  GS N   LDVL  L K       LF+ L++  G +      +  L+ +       
Sbjct: 424 NSIWEGSANVQCLDVLRALRKEPEAINALFAELQRAAGKNNAYDCHLKTLKAAFDDQDTL 483

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  +R + E++ALA   A L  A   D+A+ F   R           L        II  
Sbjct: 484 EIRSRLVVEQMALALQGALLLTANDKDMAEAFCSARLDKQQGLAFGTLPASVPFDEIIQR 543

Query: 558 LYLD 561
             L+
Sbjct: 544 GILE 547


>gi|114320872|ref|YP_742555.1| acyl-CoA dehydrogenase domain-containing protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227266|gb|ABI57065.1| acyl-CoA dehydrogenase domain protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 559

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 191/549 (34%), Positives = 281/549 (51%), Gaps = 13/549 (2%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELAR 75
             +++    NQPP     N Y  D+ L   +  +        L   G +       EL  
Sbjct: 13  WLAETHRVENQPPPLQAYNLYRQDAALREGVHRYRAGWAEAGLVRQGAWAGRPEVIELGF 72

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN   P+LH +   G R D+V +HPA+H L+RR++  GLH + W           AH  
Sbjct: 73  QANEQPPRLHTHDRFGHRVDEVRYHPAYHRLMRRALTQGLHAAPWRNP-----GPGAHVA 127

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           RAAR YL AQ+EAGH    ++T A++ AL   P +   W  K+ + +YDP N     K +
Sbjct: 128 RAARYYLQAQVEAGHGCPVTMTFAAVPALRRQPDLAASWLDKLLALDYDPRNCPVAAKKA 187

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           V IG+ +TEK+GG+D+ A T++   +        Y L GHK+F+S+PMSDAF++LAQ + 
Sbjct: 188 VTIGMAMTEKQGGSDVRANTTRAYPLGTPGPGEAYELVGHKYFVSAPMSDAFLVLAQTDA 247

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CFL+PR   DG  N L  Q+LK K+GN +NA+ E E      +++G+       + D
Sbjct: 248 GLSCFLLPRWRPDGGRNPLQIQQLKRKMGNVANASSETELRGALAWMVGEPGRGVRTIID 307

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +   D  I S +G+R +  +A+H+ R R   GG L+DQP+M   +AD+AL+  AA  
Sbjct: 308 MVAMTRYDCTIGSAAGLRQAAVQALHHCRHRRAFGGRLVDQPLMANLLADLALESEAALQ 367

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ RLA + D   +   E A  R+  P+ KYW CK  P    EAME IGGSG +E+  + 
Sbjct: 368 VALRLAGALDRPDA-PREQALFRLATPVAKYWVCKRTPGHAYEAMEAIGGSGVMEDCILP 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD 489
           R +RESP N+I  GSGN   LDVL  +EK  +  +     LE+  G+  +    +  LR 
Sbjct: 427 RLFRESPINAIWEGSGNIQCLDVLRAVEKAPDTLDAFLDELERARGADRRYDAHLDRLRQ 486

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++    +    AR L + +A A  AA L R     +AD +   R        +  L    
Sbjct: 487 ALPPRADAAYRARALVDDMATALQAALLLRHSDPALADAYCAGRLAATGAHHYGTLPDGV 546

Query: 550 NAAHIIDSL 558
           + A II   
Sbjct: 547 DCAAIIRRA 555


>gi|188590973|ref|YP_001795573.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170937867|emb|CAP62851.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 556

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 180/543 (33%), Positives = 283/543 (52%), Gaps = 19/543 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     N + SD ++ A +       H + L   G  +     Q+ A  A
Sbjct: 4   AATHRVFNQVPDLAHYNLFDSDPMVRAALERLGGGWHADALRQFGARLGEPEVQQWAADA 63

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N +TP+LH +   GER D VEFHP WHALL       L    + +      R  A   R 
Sbjct: 64  NRHTPELHTHSRTGERIDMVEFHPGWHALLGLLRSQQLQALPFAQP-----RAGAWAART 118

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQ+E+G L  P++T AS+  L     +  +  P++++  +D  +     K+++ 
Sbjct: 119 AGYFLQAQVESGSLCPPTMTFASIPVLRKEAALFAELEPRLYATGHDARDLPWRDKSAIM 178

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV---E 250
           IG+G+TEK+GG+D+ A T+  + +        Y L+GHKWF S+PM DA +++A++   +
Sbjct: 179 IGMGMTEKQGGSDVRANTTVARPVRGEGRGAEYALTGHKWFFSAPMCDAHLVVARMGAED 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF +  G L+G+       + 
Sbjct: 239 GPLSCFFVPRFRDDGSRNAVQIQRLKDKLGNRSNASSEVEFRDAAGILIGEEGRGIPTII 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD  I S + +R +  +A+H+ R R   G +L DQP+M+  +AD+AL+  AAT
Sbjct: 299 EMATSTRLDCVIGSAAILRAAFVQALHHTRHRSAFGRLLCDQPLMRNVLADLALESEAAT 358

Query: 371 ALSFRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            L   L ++F  A+        AA+ R++ P  K+W CK       EAME  GG+GY+EE
Sbjct: 359 LLMMELGHAFAHAEGDNPDPLAAAWKRVVTPAAKFWVCKRTLEATGEAMEVWGGNGYVEE 418

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVIT 485
             +AR YRE+P NSI  GSGN M LDVL  L++  +   +L   L +  G   S +  + 
Sbjct: 419 GPMARLYREAPVNSIWEGSGNIMCLDVLRALQRNPDDGARLLQDLSRRAGGHPSVRAELA 478

Query: 486 ILRDSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            L+  +    ++ +  AR   + + L + AA +      + A++F+ +R           
Sbjct: 479 SLQAMLREPAEQQEANARRFAQGLVLTAQAALMLAHADPENAELFVASRLGRQHGRVFGT 538

Query: 545 LHG 547
           L  
Sbjct: 539 LDA 541


>gi|290512257|ref|ZP_06551624.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55]
 gi|289775252|gb|EFD83253.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55]
          Length = 545

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/518 (35%), Positives = 273/518 (52%), Gaps = 9/518 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD+ L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----ARESAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +        +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           L +  +   R +   +    + A + R     +A+ + 
Sbjct: 474 LRRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 511


>gi|264680924|ref|YP_003280834.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262211440|gb|ACY35538.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 549

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 177/547 (32%), Positives = 284/547 (51%), Gaps = 20/547 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N Y+SD +L   +    +     EL+  G    +      A  AN+  P+L
Sbjct: 8   NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLRAAEEANHFEPEL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H + P G+R D+V FHPAWH ++  +  +G+    +        R  A     A L++ +
Sbjct: 68  HTHSPSGDRIDQVRFHPAWHQMMAIARRNGISNLPFTDQ-----RPTAWAAYGASLFMHS 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G     ++T AS+  +   P+++    P + S +YD  +     K S+ +G+G+TE
Sbjct: 123 QIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMGMTE 182

Query: 205 KRGGTDIAAITSQGQKIS--------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
           ++GG+D+ + T++   ++           Y ++GHKWF S+PM D  ++LA+ E R   C
Sbjct: 183 RQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERGPTC 242

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DGS N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M   
Sbjct: 243 FFVPRWRPDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEMATY 302

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L+  
Sbjct: 303 TRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWLAMD 362

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA  F      + + A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R +R
Sbjct: 363 LAARF--GSEDALDQAWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGRLFR 420

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + +  +    L   L +        +  +  LR++++L
Sbjct: 421 EAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHLREVGSEDAVLRAQVDKLREAVTL 480

Query: 494 CKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +D +  AR  T+++A    A  + +   +D A  F+ +RF  +      +  G  + A
Sbjct: 481 PPQDLEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRFDPDWGPVAGVACGSSDPA 540

Query: 553 HIIDSLY 559
            ++ + +
Sbjct: 541 ALLRNAW 547


>gi|171315814|ref|ZP_02905045.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171099003|gb|EDT43788.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 550

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 180/549 (32%), Positives = 276/549 (50%), Gaps = 17/549 (3%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANYN 80
               NQ    +  N +++D  L   +A          L+  G  + S     LA  AN +
Sbjct: 6   HAVTNQFDELVDYNLFATDIALRDALARAGADWAVPRLDAYGARLGSADTARLADEANRH 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L+A+   G R D+V+FHPAWH LL    ++G     +  +     R       AA  
Sbjct: 66  TPELNAFDRRGRRIDRVDFHPAWHTLLGLYRNEGFVSLPFRDT-----RPGRWAASAAGF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+
Sbjct: 121 YLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           G+TEK+GG+D+ A T+    I      G Y L GHKWF S+PM DA +++A+ E G   C
Sbjct: 181 GMTEKQGGSDVRANTTLATAIGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M   
Sbjct: 241 FYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATY 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + S + +R  + +AI Y RRRH  G  L +QP+M+  +AD+AL+  AA  L+ R
Sbjct: 301 TRLSCVLGSAAMLRQGVVQAIAYTRRRHAFGRALAEQPLMRTVLADLALESEAALVLAMR 360

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +R
Sbjct: 361 LADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFR 419

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + +  +                   +  +  LR  ++ 
Sbjct: 420 EAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAELAGLGAGEPRIRAALDALRAMLAA 479

Query: 494 CKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCMLHGRFN 550
             +  +  AR   +++AL + A  L R   + +AD F+  R    +             +
Sbjct: 480 PADALEASARLFAQRLALVAQACLLRRDAPSAVADAFVATRLAAPDWGRIAGGFDPHALD 539

Query: 551 AAHIIDSLY 559
            A ++   Y
Sbjct: 540 VAALLQRAY 548


>gi|284031260|ref|YP_003381191.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810553|gb|ADB32392.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 560

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 192/564 (34%), Positives = 291/564 (51%), Gaps = 30/564 (5%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           +D     NQ P   G+N ++ D  L   +     +     L  +GE   +  A   A  A
Sbjct: 2   ADPNAVTNQAPPLQGVNFFTQDQALGDALRPHADLAKDSGLTAIGELAGTQEALSHALPA 61

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P L  +   G R D+VEFHP+WH L+ +++  GL  + W        R   H  RA
Sbjct: 62  NQHPPVLKTHDRYGHRVDEVEFHPSWHWLMDKAVGFGLQAAPWTSD-----RPAPHLARA 116

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  Y+ +Q+E GH    S+T A++ AL T+ R+  +W P++ + EYD        K  V 
Sbjct: 117 AGFYVWSQVEPGHACPVSMTYAAVPALRTSDRLAAEWIPRLAAPEYDVRRLPVADKAGVL 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI--------------------SDGIYCLSGHKWFLSS 237
            G+G+TEK+GG+D+ +  +                         +D  Y L+GHKWF S+
Sbjct: 177 AGMGMTEKQGGSDVRSNLTTATPSRRGSEAAGAPSGVGAATPTGADDEYLLTGHKWFCSA 236

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +D F++LAQ    + CF+VPR+L DG+ N    QRLK+K+GNRSNA+ E+EF  T G+
Sbjct: 237 PQADVFLVLAQAPEGLSCFVVPRVLADGNRNAFALQRLKDKLGNRSNASSEVEFHGTVGY 296

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            LGD       + +M     LD  + S + MR +L EA  +   R   GG+L ++P M+ 
Sbjct: 297 RLGDEGTGVRTIIEMVAATRLDCVLGSAALMRRALVEATWHTSYRSAFGGLLRNKPAMRN 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAM 416
            +AD+AL+  AATAL  RLA + D A++  E+A A+ RI  P+ K+W CK  PA++AEA+
Sbjct: 357 VLADLALESEAATALGMRLAAAVDAAEAGDEQAKAFRRIALPLAKFWVCKRTPAMVAEAL 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           EC+GG+GY+EE  +   +RESP NSI  GSG    LDVL  L +     +     +    
Sbjct: 417 ECLGGNGYVEESGLPLLFRESPLNSIWEGSGTVNALDVLRALRR-PESLQAWLLEVGAAQ 475

Query: 477 GSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           G+  +    +T + +++S   E +  AR L  ++A    A+ L R    D+AD F+ +R 
Sbjct: 476 GADPRLDAAVTDVLEALSDVSEAEAGARRLAARMAACLQASLLVRYSPPDVADAFVASRL 535

Query: 535 LDNCHSTHCMLHGRFNAAHIIDSL 558
             +       L        I+D +
Sbjct: 536 AGDWGGVFGTLPRTTPFGGIVDRV 559


>gi|21957352|gb|AAM84227.1|AE013666_7 putative acyl coenzyme A dehydrogenase [Yersinia pestis KIM 10]
          Length = 557

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 285/547 (52%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 18  QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 77

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 78  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 134 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 194 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGL 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N + ++RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 254 SCFFLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 313

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 314 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 373

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 374 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 432

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 433 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 492

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 493 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 546

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 547 ARLLERA 553


>gi|326382864|ref|ZP_08204554.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198454|gb|EGD55638.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 540

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 193/548 (35%), Positives = 287/548 (52%), Gaps = 17/548 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMA 77
           + +    NQ P  + +N Y+S + LV  +           L   G  V     Q  A +A
Sbjct: 2   TATHEVFNQAPQRVDVNEYTSHTALVEAVGVYGGGWATDALTEAGALVGRADFQRDAELA 61

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N  TP+LH +   G R D +EFHPA+H ++  +I  G H S W        R  AH  RA
Sbjct: 62  NAITPKLHTHDRWGNRIDDIEFHPAYHRIIGDAIAHGAHTSCWSDP-----RDGAHVARA 116

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A      Q+E GH    S+T A + +L    ++ + W P++FS +Y   +    QKTS  
Sbjct: 117 AMFMQFGQIEPGHACPVSMTHAVVPSLRVDEKLAEQWLPRVFSNDY-QHDLGSGQKTSAI 175

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
            G+ +TEK+GG+D+ A T++  + SDG Y ++GHKWF S+P SDAF++LA+ +  V CF+
Sbjct: 176 FGMAMTEKQGGSDVRANTTRAVEQSDGTYLITGHKWFCSAPQSDAFLVLAKTDPGVTCFV 235

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG+ N    QRLK+K+GN+SNA+ E+EF  T G+ LGD       + +M     
Sbjct: 236 VPRVLPDGTRNVFNVQRLKDKLGNKSNASSEVEFDRTVGWRLGDEGAGVRTIIEMVNQTR 295

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S +GMR S+AEA  + R R   G  LIDQP M   +AD+ ++  AA   + RLA
Sbjct: 296 LDCILGSAAGMRQSVAEAAWHVRNRAAFGATLIDQPAMTAVVADLQVEAEAAIWTAMRLA 355

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-ERSIARHYRE 436
           +++D+     E AA+ R+   + KYW CK  P    EA+EC+GG+GY E    ++R YRE
Sbjct: 356 SAYDD--DAEESAAFRRLATAVGKYWVCKRGPNHAYEALECLGGNGYCENGFPLSRRYRE 413

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDS 490
            P  ++  GSGN + LDVL  + +     E + +  E+ LG         +K   ++  +
Sbjct: 414 QPVMAVWEGSGNVIALDVLRAMMRDPMSVEAVDNEFERGLGVYREYDLHVEKTRKLIAQA 473

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
            +       LAR LTE +A+A   + L R     + D F+  R  D  H  + +L    +
Sbjct: 474 AADPNAAPALARRLTESMAIALQGSILIRQAPESVTDAFIAGRIADPGHM-YGVLDSNLD 532

Query: 551 AAHIIDSL 558
            A I    
Sbjct: 533 LAAIAARA 540


>gi|108809892|ref|YP_653808.1| isovaleryl CoA dehydrogenase [Yersinia pestis Antiqua]
 gi|108813449|ref|YP_649216.1| isovaleryl CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|150260574|ref|ZP_01917302.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125]
 gi|161484880|ref|NP_667976.2| isovaleryl CoA dehydrogenase [Yersinia pestis KIM 10]
 gi|165926727|ref|ZP_02222559.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936433|ref|ZP_02225001.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011875|ref|ZP_02232773.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166214000|ref|ZP_02240035.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400611|ref|ZP_02306120.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419181|ref|ZP_02310934.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423560|ref|ZP_02315313.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467835|ref|ZP_02332539.1| isovaleryl CoA dehydrogenase [Yersinia pestis FV-1]
 gi|218927585|ref|YP_002345460.1| isovaleryl CoA dehydrogenase [Yersinia pestis CO92]
 gi|229840256|ref|ZP_04460415.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842334|ref|ZP_04462489.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903927|ref|ZP_04519040.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|270489085|ref|ZP_06206159.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis
           KIM D27]
 gi|294502490|ref|YP_003566552.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003]
 gi|108777097|gb|ABG19616.1| acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|108781805|gb|ABG15863.1| putative acyl-CoA dehydrogenase [Yersinia pestis Antiqua]
 gi|115346196|emb|CAL19064.1| putative acyl-CoA dehydrogenase [Yersinia pestis CO92]
 gi|149289982|gb|EDM40059.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125]
 gi|165915549|gb|EDR34158.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921350|gb|EDR38574.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989234|gb|EDR41535.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204795|gb|EDR49275.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963175|gb|EDR59196.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049979|gb|EDR61387.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057730|gb|EDR67476.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229679697|gb|EEO75800.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516]
 gi|229690644|gb|EEO82698.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696622|gb|EEO86669.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|262360521|gb|ACY57242.1| putative acyl-CoA dehydrogenase [Yersinia pestis D106004]
 gi|262364468|gb|ACY61025.1| putative acyl-CoA dehydrogenase [Yersinia pestis D182038]
 gi|270337589|gb|EFA48366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis
           KIM D27]
 gi|294352949|gb|ADE63290.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003]
 gi|320013750|gb|ADV97321.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 547

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 285/547 (52%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 68  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 124 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N + ++RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 244 SCFFLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 536

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 537 ARLLERA 543


>gi|238892666|ref|YP_002917400.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae NTUH-K2044]
 gi|238544982|dbj|BAH61333.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 551

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 182/524 (34%), Positives = 273/524 (52%), Gaps = 9/524 (1%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLS 67
            +  + +H    +    NQP      N + SD+ L  A++          L  +G+ + +
Sbjct: 1   MMEGDTMHWQ--THTVFNQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W       
Sbjct: 59  AESLELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
            R+ A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP 
Sbjct: 115 AREGAFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++L
Sbjct: 175 LAPGGQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ    + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD     
Sbjct: 235 AQAPTGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGV 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +
Sbjct: 295 RQILRMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TA  FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTAFLFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + R YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +       
Sbjct: 414 ESELPRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAW 473

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +    L +  +   R +   +    + A + R     +A+ + 
Sbjct: 474 RQLQQLLKRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 517


>gi|45435248|gb|AAS60808.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 557

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 284/547 (51%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 18  QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 77

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 78  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 134 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 194 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGL 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 254 SCFFLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 313

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 314 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 373

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 374 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 432

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 433 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 492

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 493 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 546

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 547 ARLLERA 553


>gi|50083701|ref|YP_045211.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1]
 gi|49529677|emb|CAG67389.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1]
          Length = 548

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 172/542 (31%), Positives = 282/542 (52%), Gaps = 14/542 (2%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
           NQ       N Y SD  L  ++  +     K+L   GE +    +  LA  AN + PQLH
Sbjct: 11  NQFNELCNYNLYQSDVPLQEILKRYGHHEQKQLTTFGEILGHQRSYMLADQANRHLPQLH 70

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G R D+VEFHPAWH  +R++    LH       F     +      AAR YL  Q
Sbjct: 71  GFDARGRRIDEVEFHPAWHQWMRQNREYALHAHP----FITSAAQTGWVEWAARFYLSGQ 126

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +E+G L   ++T  S+  +    ++ +    K+ S +YD  +    QK+S+ +G+G+TEK
Sbjct: 127 VESGSLCPSAMTLGSIPLIQRESKLWQTLGKKLLSCDYDERDILISQKSSIWVGMGMTEK 186

Query: 206 RGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPR 260
           +GG+D+ A  +  + +        Y L+GHKWF S+PMSDA +++AQ  +  + CF VPR
Sbjct: 187 QGGSDVRANQTFAKPVGISGRGEEYLLTGHKWFFSAPMSDAHLVVAQTSQEELACFFVPR 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            L +GS N +  Q+LKNK+GN+SN++ E+EF +  G ++G+       + +M     L  
Sbjct: 247 WLSNGSKNHIEIQQLKNKVGNKSNSSSEVEFRDALGIMIGEEGRGIPTIIEMATYTRLTC 306

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           ++ S + +R +L + I Y R+R   G +L DQP+M+  + D+AL+  AA  LS  LA  +
Sbjct: 307 SVGSTAILRQALVQCIAYTRQRRAFGRVLADQPLMQAVLTDMALETEAALHLSMHLAACY 366

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 S+  A+ R++ P  K+W CK A  +  EAME  GG+GY+E   ++R ++E+P N
Sbjct: 367 QRDDDISQ--AWVRLLTPAAKFWICKRAVELTGEAMEVFGGNGYVETGIMSRLFKEAPVN 424

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITILRDSISLCKED- 497
           SI  GSGN M LDVL  +++     + LF +            + +  L+D +    E  
Sbjct: 425 SIWEGSGNIMCLDVLRAIQRHPESIQVLFDSFGDVTAQESCLYQDLQALKDELQYSSEQL 484

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  AR    ++ L + A  + R   + ++D F+++R+         +L    ++  I++ 
Sbjct: 485 QFSARHFVSRLVLLTQAVLMRRYAPHWVSDAFIQSRYGTWHGRVTGILPVMPDSKLILER 544

Query: 558 LY 559
            Y
Sbjct: 545 AY 546


>gi|319951106|ref|ZP_08024959.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435266|gb|EFV90533.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 545

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 186/547 (34%), Positives = 286/547 (52%), Gaps = 17/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMAN 78
            +   LNQ P  + ++ Y+ +  L   +A F      +    +G +V +   Q  A +AN
Sbjct: 8   STHVVLNQAPPRVDVDEYALNPALQEAVAVFSPHARVERFHEIGRHVGTEQYQHDAELAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            +TP  H++   G R D++EFHP++H ++  S+  GLH S W         + A+  RAA
Sbjct: 68  THTPVHHSHDRWGNRVDEIEFHPSYHRIMEYSVAHGLHTSAWADP-----GQGANVERAA 122

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              L++Q+EAGH    S+T A + +L  +P +  +W P + S  YDP  + P  K+ V  
Sbjct: 123 GFMLVSQVEAGHGCPLSMTHAVVPSLRLSPELAAEWEPALLSTVYDPELRDPATKSGVLF 182

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+ +TEK+GG+D+ A T+  + + DG  + L GHKWF S+P SDAF++LAQ    + CFL
Sbjct: 183 GMAMTEKQGGSDVRANTTTAEPVGDGDCHVLRGHKWFCSAPQSDAFLVLAQAPEGLSCFL 242

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L  G  N    QRLK+K+GN+SNA+ E+EF  T G+++G+       + +M     
Sbjct: 243 VPRVLPGGERNPFLVQRLKDKLGNKSNASSEVEFDGTLGWMVGEPGRGVRTIIEMVGRTR 302

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + + +GMR  +AEA  +AR R   G  L+DQP M   +AD+ L+  AAT  + RLA
Sbjct: 303 LDCVLGAAAGMRQGVAEAAWHARHRAAFGATLVDQPAMAAVLADLQLESEAATWTALRLA 362

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +++D      E A Y R+   + KYW CK  P    E++EC+GG+GY E   +AR YRE 
Sbjct: 363 SAYDN----EEFAPYRRLATAVAKYWVCKRGPNHAYESLECLGGNGYTEAFPLARRYREQ 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSIS--- 492
           P  ++  GSGN + LDVL  + +         + L   LG      + +  +R  I    
Sbjct: 419 PVLAVWEGSGNVIALDVLRAMTREPESVAAFDAELAAQLGGHELYDRHVERVRALIGRAA 478

Query: 493 -LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
                  G+AR L E +ALA   A L       +A+ F   R  D+  + +  L    + 
Sbjct: 479 ADPGAAPGIARRLVEAMALAQQGAVLLAHAPAPVAEAFCLARLGDDRSAEYGALPDGVDI 538

Query: 552 AHIIDSL 558
             ++   
Sbjct: 539 DALVARA 545


>gi|206580739|ref|YP_002240862.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342]
 gi|206569797|gb|ACI11573.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342]
          Length = 545

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 182/518 (35%), Positives = 272/518 (52%), Gaps = 9/518 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD+ L  A++          L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWLED----AREGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP      Q
Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ    
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF +  G+L+G+       +  M
Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D A+ S + MR + + A+++A +R   G  L+DQP+M++ +  +AL +   TA 
Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  + R
Sbjct: 355 LFRLARAWDR-REDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +        +    
Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQQL 473

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           L +  +   R +   +    + A + R     +A+ + 
Sbjct: 474 LRRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 511


>gi|296136192|ref|YP_003643434.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295796314|gb|ADG31104.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 543

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 199/549 (36%), Positives = 285/549 (51%), Gaps = 15/549 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQEL 73
           +  P  +    NQ P     N +++D  L   +A        ++L   G  + +  + E 
Sbjct: 1   MTWP--THDVTNQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGAAASYEQ 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN NTP LHA+   G R D++EFHPAWHAL+      GLH   W +      +  AH
Sbjct: 59  GRLANQNTPVLHAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWAQP-----QPGAH 113

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA   L  Q+EAG +   ++T  ++ A+     + +DW P +   EYDP +    QK
Sbjct: 114 VARAAGFILQTQIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPLAQK 173

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
               IG+G+TEK+GG+D+ + T++ +    G Y L+GHKWF S+P  DA ++LAQ  G +
Sbjct: 174 RGGLIGMGMTEKQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGL 233

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF   +G LLG+       + +M 
Sbjct: 234 SCFFVPRWAPDGSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMG 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               LD  + +   MR +L++A+HYAR R   G  LIDQP+M+  +AD+AL++ AA AL+
Sbjct: 294 TYTRLDCVLGTTGLMRQALSQAVHYARHRLAFGAALIDQPLMRNVLADMALEVEAAIALA 353

Query: 374 FRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            RLA +FD   S+ +EA       + P  K+  CK    + AEAME +GG+GY+EE   A
Sbjct: 354 LRLAQAFD---SQHDEAQLLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDVQA 410

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD 489
           R YRE P NSI  GSGN M LDVL  L K     + L + L Q  G +      +     
Sbjct: 411 RIYREMPVNSIWEGSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSA 470

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           ++      +  AR LT  + LA  AA L R     IA  F  +R           L    
Sbjct: 471 ALRDTDAQQSRARALTHDLVLALQAALLLRHAPEPIAQAFCASRLGGEWGGGFGTLSKAT 530

Query: 550 NAAHIIDSL 558
           +   ++   
Sbjct: 531 DFDLLLSRA 539


>gi|162421077|ref|YP_001605267.1| isovaleryl CoA dehydrogenase [Yersinia pestis Angola]
 gi|162353892|gb|ABX87840.1| acyl-CoA dehydrogenase family protein [Yersinia pestis Angola]
          Length = 547

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 284/547 (51%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 68  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 124 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 244 SCFFLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGNTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 536

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 537 ARLLERA 543


>gi|145600839|ref|YP_001164915.1| isovaleryl CoA dehydrogenase [Yersinia pestis Pestoides F]
 gi|161511444|ref|NP_991931.2| isovaleryl CoA dehydrogenase [Yersinia pestis biovar Microtus str.
           91001]
 gi|229836644|ref|ZP_04456810.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A]
 gi|145212535|gb|ABP41942.1| acyl-CoA dehydrogenase [Yersinia pestis Pestoides F]
 gi|229706328|gb|EEO92336.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A]
          Length = 547

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 284/547 (51%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 68  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 124 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S      +Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 244 SCFFLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 536

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 537 ARLLERA 543


>gi|115350163|ref|YP_772002.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115280151|gb|ABI85668.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 550

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 185/550 (33%), Positives = 286/550 (52%), Gaps = 19/550 (3%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANYN 80
               NQ    +  N +++D  L   +A         +L+  G  + S    +LA  AN +
Sbjct: 6   HAVTNQFDELVDYNLFATDIALRDALARAGADWAVPQLDAYGARLGSADTAQLADEANRH 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L+A+   G R D+V+FHPAWH LL    H+G     +  +     R       AA  
Sbjct: 66  TPELNAFDRRGRRIDRVDFHPAWHTLLGLYRHEGFVSLPFRDT-----RPGRWAASAAGF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+
Sbjct: 121 YLHGQIEAGTLCPATMTQAAIPVLQKEPALWNLLRDKLYSDDYDPRDVPVADKRSIWFGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   C
Sbjct: 181 GMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M   
Sbjct: 241 FYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATY 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ R
Sbjct: 301 TRLSCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMR 360

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +R
Sbjct: 361 LADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFR 419

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS---SGKKVITILRDSIS 492
           E+P NSI  GSGN M LDVL  + +  +    L + L  DLG+     +  +  LR  ++
Sbjct: 420 EAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAEL-TDLGAGEPRIRAALDALRAMLA 478

Query: 493 LCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRF 549
              +  +  AR   +++AL + A  L R     +AD F+  R  ++              
Sbjct: 479 APADTLEASARLFAQRLALVAQACLLRRDAPAAVADAFVATRLGESSWGRIAGGFDPHAL 538

Query: 550 NAAHIIDSLY 559
           + A ++   Y
Sbjct: 539 DVAALLQRAY 548


>gi|302539970|ref|ZP_07292312.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302457588|gb|EFL20681.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 508

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 182/506 (35%), Positives = 272/506 (53%), Gaps = 13/506 (2%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +G    S   Q+ ARMA  + P LH +   G R D+VE+HPA+H L+  ++  G H + W
Sbjct: 1   MGARAGSAEVQDWARMAEEHHPVLHTHDRYGHRIDEVEYHPAYHQLMTAAVESGQHAAAW 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +     R   H  RAA  Y  AQ E GH    S+T A++ AL   P +   + P + +
Sbjct: 61  AET-----RPGRHLARAATFYAFAQAEPGHGCPISMTYAAVPALRAEPELAAAYEPLLTA 115

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSP 238
           R YD   +AP+ K  +  G+ +TEK+GG+D+ A T++       DG Y L+GHKWF S+P
Sbjct: 116 RTYDFGLRAPLTKRGLIAGMSMTEKQGGSDVRANTTEAVPSSADDGTYLLTGHKWFTSAP 175

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           MSD F+ LAQ    V CFLVPR+L DG+ N L  QRLKNK+GNR+NA+ E+E+     + 
Sbjct: 176 MSDVFLTLAQAPEGVTCFLVPRVLPDGTRNALHLQRLKNKLGNRANASSEVEYDRAVAWR 235

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + +M  +  LD  I S +GMR  L +A+H+   R   G  LIDQP+M+  
Sbjct: 236 IGEPGRGVRTIVEMVSVTRLDCVIGSAAGMRAGLRQALHHCEHRRAFGAELIDQPLMRNV 295

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAME 417
           +AD+A++  AAT L+ RLA + D A++     A  R +   ++KYW CK      AEA+E
Sbjct: 296 LADLAVESEAATTLAMRLATALDRAEAGDAGEAALRRLGLAVSKYWVCKRGATHAAEALE 355

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
           C+GG+GY+E+  + R YRE+P  SI  GSGN   LDVL  L++ T   + + + ++   G
Sbjct: 356 CLGGNGYVEDSGMPRLYREAPLQSIWEGSGNVAALDVLRALDRETGALDAVLAEVDAAAG 415

Query: 478 SSGKKVITILRD-----SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           +  +      R       ++  +  + LAR L E++ L    + L R     +AD F  +
Sbjct: 416 ADARLDAAAARLRALLPQLADPQRAQVLARRLAEQMTLVLQGSLLVRYSHPAVADAFCAS 475

Query: 533 RFLDNCHSTHCMLHGRFNAAHIIDSL 558
           R   +       L    +   I+D  
Sbjct: 476 RLDGDWGHAFGTLPPGTDTGPILDRA 501


>gi|123440769|ref|YP_001004761.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087730|emb|CAL10515.1| putative acyl-CoA dehydrogenase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 547

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 180/535 (33%), Positives = 278/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N Y SD  L   +         ++L  +G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAA
Sbjct: 68  ANPPELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + 
Sbjct: 124 RFILHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + +++ +      +G  Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNSTRAEPLQFRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 244 SCFFLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSIALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA+++ +     E+  ++R++ P  KY  C +    +AEAME +GG GY E+  + R 
Sbjct: 364 MRLASAWGKTGEVHEQV-FSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRI 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL    K  +  E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQLRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  +T+++     A+ L R     +AD +   R   +    + M+ 
Sbjct: 483 KNPKEEQGRA--ITQQLFDLCCASQLLRFASPPLADAWC--RMTLDHRDQY-MVP 532


>gi|152973052|ref|YP_001338198.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150957901|gb|ABR79931.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 550

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/520 (34%), Positives = 271/520 (52%), Gaps = 9/520 (1%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H    +    NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQ--THTVFNQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + +  +++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVVLYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +  + E+A+AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDH-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +        +  
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQ 476

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             L +  +   R +   +    + A + R     +A+ + 
Sbjct: 477 QLLKRPAEEQGREIARLVYRLGAGAQMLRHASPPLAEAWC 516


>gi|153947947|ref|YP_001402597.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 31758]
 gi|170026003|ref|YP_001722508.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis YPIII]
 gi|152959442|gb|ABS46903.1| acyl-CoA dehydrogenase family protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|169752537|gb|ACA70055.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis
           YPIII]
          Length = 547

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 188/547 (34%), Positives = 283/547 (51%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 68  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 124 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S       Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLGD       +  M 
Sbjct: 244 SCFFLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGDEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 536

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 537 ARLLERA 543


>gi|293393204|ref|ZP_06637519.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582]
 gi|291424350|gb|EFE97564.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582]
          Length = 542

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 180/544 (33%), Positives = 270/544 (49%), Gaps = 15/544 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD+ L   +           L  LG+ + +  + EL R+AN 
Sbjct: 5   THTVFNQPKPLGNSNLFLSDTPLREAVQREHAGWDADVLASLGQQLGTQESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  Y   G+R D + FHPAWH L++  + + +H   W+       R  +   RAAR
Sbjct: 65  NPPELLRYDASGQRLDDLRFHPAWHILMQGLVANRVHNLPWEE----QARIGSVAARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T  ++  L  + P   +DW P + S  YD       QK  + I
Sbjct: 121 FILHAQVEAGTLCPITMTYGAIPLLQRSLPAPFRDWLPPLLSDRYDAHLLPGGQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+ + T+         DG  Y L GHKWF S P SDA ++LAQ EG + 
Sbjct: 181 GMGMTEKQGGSDVLSNTTSATPLAGRGDGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR+L DG+ N +  +RLK+K+GNR+NA+ E+EF +   +LLGD       +  M  
Sbjct: 241 CFFLPRILPDGTRNAVRLERLKDKLGNRANASSEVEFQDATAWLLGDEGDGVRQILKMGS 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               D A+ S   MR +L+ A+++A +R   G  LI QP+M++ +A +AL +   TA   
Sbjct: 301 QTRFDCALGSHGLMRRALSVALYHAHQRQAFGKTLIQQPLMRQVMAGMALRLEGQTAALM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++   +    +    RIM    K+  C+     +AEAME +GG GY E+  + R Y
Sbjct: 361 RLARAYGSQQEPLSQG-LCRIMTSAAKFDVCRQGIPFVAEAMEVLGGIGYCEDSELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDVL    K   + E +   L +  G +        +      
Sbjct: 420 REMPVNSIWEGSGNIMCLDVLRAWAKSPLVQEAVHQELAEVKGQNRHYDRQWRQLLQQTG 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           K  +  AR LT ++    +AA L R     IA+ + ++   +        L        +
Sbjct: 480 KLQETQARALTGRLFTLFAAAQLLRYASPPIAEAWCQSMLDERGQR---ALPDTL-CESL 535

Query: 555 IDSL 558
           +D  
Sbjct: 536 LDRA 539


>gi|76810278|ref|YP_331576.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167847872|ref|ZP_02473380.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|254184010|ref|ZP_04890601.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|254186476|ref|ZP_04892993.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194570|ref|ZP_04901001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254258200|ref|ZP_04949254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|254298716|ref|ZP_04966167.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|76579731|gb|ABA49206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157808475|gb|EDO85645.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157934161|gb|EDO89831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651320|gb|EDS84013.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|184214542|gb|EDU11585.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|254216889|gb|EET06273.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 546

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|221069757|ref|ZP_03545862.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714780|gb|EED70148.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 549

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 180/547 (32%), Positives = 284/547 (51%), Gaps = 20/547 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N ++SD +L   +A   +     EL+  G    +      A  AN+  P+L
Sbjct: 8   NQAPELKDYNVFTSDPVLQRAVARGGAQWREPELQRQGAEYGAEATLRAAEDANHFEPEL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H + P G+R D+V FHPAWH ++  +  +G+    +        R+ A     A L++ +
Sbjct: 68  HTHSPTGDRIDQVRFHPAWHQMMTIARRNGICNLPFTD-----ARQTAWPAYGASLFMHS 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G     ++T AS+  +   P++H    P + S +YD  +     K S+ +G+G+TE
Sbjct: 123 QIESGSGCPTTMTKASIPLVRLNPQLHAVLGPLLASTDYDARDIPAEGKRSITVGMGMTE 182

Query: 205 KRGGTDIAAITSQGQKIS--------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
           ++GG+D+ + T++   ++           Y ++GHKWF S+PM D  ++LA+ E R   C
Sbjct: 183 RQGGSDVRSNTTRAVALNPSGSLGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERGPTC 242

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DG  N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M   
Sbjct: 243 FFVPRWRPDGRKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEMATY 302

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L+  
Sbjct: 303 TRLDCALTSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWLAMD 362

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA  F        + A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R +R
Sbjct: 363 LAARF--GSEDPLDQAWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGRLFR 420

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + +  +    L   L+Q        +  +  LR +I L
Sbjct: 421 EAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHLQQAGAEEAVLRTQVDKLRQAIML 480

Query: 494 CKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +D +  AR  T+++A+   A  + +   +D A  FL +RF  +      +  G  + A
Sbjct: 481 APQDLEREARRFTQRLAITVQATLMLQHASSDSAAAFLGSRFDPDWGPVAGVACGSSDPA 540

Query: 553 HIIDSLY 559
            ++ + +
Sbjct: 541 ALLRNAW 547


>gi|167921049|ref|ZP_02508140.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
          Length = 546

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRSELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|108763195|ref|YP_635424.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108467075|gb|ABF92260.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 558

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 191/549 (34%), Positives = 289/549 (52%), Gaps = 14/549 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQPP     +A+++D++L  ++A         +L   G  V     Q+LA +AN 
Sbjct: 13  THEVTNQPPPLE-YDAWTTDTVLREVVAREGGGWAEADLAKYGPVVGG-EMQQLAFLANE 70

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+   +   G R D+VEFHPA+H L+   +  G+    W    +P     AH  R A 
Sbjct: 71  NKPKFRPFDRYGNRRDEVEFHPAYHRLMELGMAHGVSGFAWRNEDKP----GAHVARMAL 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q + G     ++T AS+ AL   P V  +W P++ S  YD       QK+   IG
Sbjct: 127 FYLHNQADNGTSCPLTMTYASVPALRHQPEVAMEWLPRVSSASYDSRFIPAAQKSGATIG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           +G+TEK+GG+D+   T++  ++ +G      Y L GHKWF S+PMSDAF++LA  EG + 
Sbjct: 187 MGMTEKQGGSDVRTNTTKAHRLGEGRGPGQPYALVGHKWFFSAPMSDAFLVLAHAEGGLS 246

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL+PR   DG+ N +  QRLK+K+G+ SNA+ E+E    +  ++G        + +M  
Sbjct: 247 CFLMPRFTPDGALNAIRVQRLKDKLGDWSNASSEVELHGAYAVMVGAEGRGVPTILEMVA 306

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D  I S   MR +L +AIH+ R R   G  LIDQP+M+  +AD+AL++ A  AL+ 
Sbjct: 307 LTRQDCMIGSSGQMRQALVQAIHHTRHRVAFGKRLIDQPLMRNVLADLALELEAHVALTG 366

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R++ + D      +EAA+ RI   + KYW CK  P+ + EA EC+GG+GY+EE ++ R Y
Sbjct: 367 RVSRAVDATPRDEKEAAFCRIATAVGKYWVCKRTPSFVNEAQECLGGAGYVEETNLPRLY 426

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           R++P NSI  GSGN   LDVL    +     E LF+ L    G   +  +    L   ++
Sbjct: 427 RQAPLNSIWEGSGNIQCLDVLRAASREPASREALFAELLAAQGGHPAYDEATARLGKELA 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
                +  +R + E +ALA  A+ L RAG   ++D F E+R       T   L       
Sbjct: 487 NTDSLEVRSRTIVEGLALALQASLLIRAGNTAVSDAFCESRLGGAHGQTFGTLPAHAPMQ 546

Query: 553 HIIDSLYLD 561
            +I+  + +
Sbjct: 547 MLIERAFSE 555


>gi|262369998|ref|ZP_06063325.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262315037|gb|EEY96077.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 550

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 170/539 (31%), Positives = 280/539 (51%), Gaps = 14/539 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           ++    +    NQ       N + +D++L  ++  + S     L  +G+ V S    + A
Sbjct: 1   MNTAWMTHQISNQFDELETYNLFETDTVLQEILTRYGSQDQPRLTEMGKVVGSAEYYDYA 60

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +AN +TP LHA+   G R + +EFHPAWH  +  +     H   ++             
Sbjct: 61  DLANRHTPILHAFDARGRRKNFIEFHPAWHKWMGLNRQFDTHAHPFNHPNSTSK----WV 116

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
             AAR YL  Q+E G+L   S+T  S+  +   P +      K+ S EYD  +    QK 
Sbjct: 117 EWAARFYLAGQVECGNLCPNSMTLGSIPLIQREPELWAKIGDKLLSTEYDERDVPISQKK 176

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE 250
           S+ +G+G+TEK+GG+D+ A  +    +++      Y L+GHKWF S+PM DA +++A+ E
Sbjct: 177 SIWLGMGMTEKQGGSDVRANETIAVPVAEAGRGQAYLLTGHKWFFSAPMCDAHLVVAKTE 236

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              + CF VPR LE+G+ N +  QRLK+K+GNRSN++ E+EF   +G ++G+       +
Sbjct: 237 QDGLACFFVPRWLENGTKNPIHIQRLKDKVGNRSNSSSEVEFKEAWGIMIGEAGRGIPTI 296

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M     L  ++ S +  R +L + I Y R+R   G  L +QP+M+  +AD+AL+  AA
Sbjct: 297 IEMANYTRLTCSVGSTAMFRQALVQCIAYTRQRKAFGKHLAEQPLMRAVLADLALETEAA 356

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             LSF LA+ ++     +   A+ RIM P +K+W CK A  +  E ME  GG+GY++   
Sbjct: 357 MQLSFHLAHCYET--DDALSVAWKRIMTPASKFWICKRAVELTGEMMEIFGGNGYVDNGI 414

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITI 486
           +AR ++E+P N+I  GSGN M LDVL  + +     E LF  L           +++ ++
Sbjct: 415 MARIFKEAPVNTIWEGSGNVMCLDVLRAISRDVESIEILFQDLATTAMQDEQLKQELKSL 474

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            +      +E + + R L  ++ + + A  L R   N +AD F+++R+         ML
Sbjct: 475 FQLFQQTPEELQFMGRSLVSRLVILAQAVLLKRHAPNYVADGFIQSRYSPFHGRVVGML 533


>gi|51594786|ref|YP_068977.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 32953]
 gi|186893795|ref|YP_001870907.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis PB1/+]
 gi|51588068|emb|CAH19674.1| putative acyl-CoA dehydrogenase [Yersinia pseudotuberculosis IP
           32953]
 gi|186696821|gb|ACC87450.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 547

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/547 (34%), Positives = 283/547 (51%), Gaps = 19/547 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L  A++        + L L+G  + S  + EL R+AN
Sbjct: 8   QTHLVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLAN 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y   G+R  +V FHPAWH L++  IH  +H   W        R  +   RAA
Sbjct: 68  AHPPELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAA 123

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ++AG L   ++T  ++  L  T P + ++W   + S  YDP      QK  + 
Sbjct: 124 RFILHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLL 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +S       Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 184 IGMGMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGL 243

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GN SNA+ E+EF N   +LLG+       +  M 
Sbjct: 244 SCFFLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMG 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R V G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 304 GYTRFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALL 363

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ EA     E  ++R++ P  KY  C    A +AEAME +GG GY E+  + R 
Sbjct: 364 LRLARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRL 422

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL  L K     E L        G +    +    L+  +
Sbjct: 423 YREMPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYSVRGQNRLFDRAWRQLQQRL 482

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              KE++G A  LT+++     A+ L R     +AD +   R   +    + ML      
Sbjct: 483 KNPKEEQGRA--LTQQLFDLCCASQLLRFASPRLADAWC--RMTLDHRDQY-MLPEAV-C 536

Query: 552 AHIIDSL 558
           A +++  
Sbjct: 537 ARLLERA 543


>gi|260599467|ref|YP_003212038.1| isovaleryl CoA dehydrogenase [Cronobacter turicensis z3032]
 gi|260218644|emb|CBA33960.1| Protein aidB [Cronobacter turicensis z3032]
          Length = 575

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 189/533 (35%), Positives = 278/533 (52%), Gaps = 14/533 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD+ L   +    +    EL   +G+ + +  + EL
Sbjct: 32  MHWQ--THTVFNQPVALNNSNLFLSDTALREAVLREGAAWDAELLASIGQQLGTAESLEL 89

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN + P+L  Y   GER D V FHPAWH L++    + +H   W        R  A 
Sbjct: 90  GRLANAHPPELLRYDARGERLDDVRFHPAWHLLMQGLCANRVHNLPW----LETARDGAL 145

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P +  DW   + S  YD       Q
Sbjct: 146 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWRTPLASDRYDSHLLPGAQ 205

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + IG+G+TEK+GG+D+ + T++ + ++       Y L GHKWF S P SDA ++LAQ
Sbjct: 206 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGAGEAYRLVGHKWFFSVPQSDAHLVLAQ 265

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       
Sbjct: 266 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 325

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +   D A+ S   MR +LA AI++  +R   G  LIDQP+M++ +  +AL++  
Sbjct: 326 ILRMGGMTRFDCALGSHGLMRRALAVAIYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 385

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            TAL FRLA ++++ +    E A+AR+  P  KY  CK     +AEAME +GG GY EE 
Sbjct: 386 HTALLFRLARAWEQ-RESPHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 444

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + R YRE P NSI  GSGN M LDVL +L +   + E L +  E   G          +
Sbjct: 445 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSNEFEAVKGQDRHFDRAWRQ 504

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            +  L + D+   R +T ++ L ++ A + R+    +A  +     LD    T
Sbjct: 505 LAGQLRRPDEAAGRAITTQLFLLATGAQVLRSLTPPLAQAWCR-MMLDTRGDT 556


>gi|332160031|ref|YP_004296608.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664261|gb|ADZ40905.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862085|emb|CBX72251.1| protein aidB [Yersinia enterocolitica W22703]
          Length = 543

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 179/535 (33%), Positives = 276/535 (51%), Gaps = 18/535 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N Y SD  L   +         ++L  +G  + S  + EL R+AN
Sbjct: 4   QTHLVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAA
Sbjct: 64  ANPPELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + 
Sbjct: 120 RFILHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + +++ + ++       Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 180 IGMGMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L D + N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 240 SCFFLPKMLPDDTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMG 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++  +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 300 GYTRFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALL 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLAN++ E    + E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R 
Sbjct: 360 MRLANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRI 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           YRE P NSI  GSGN M LDVL    K  +  E L        G +    +    L+  +
Sbjct: 419 YREMPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQQRL 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              KE++G A  +T+++     A+ L R     +AD +   R   +    + M+ 
Sbjct: 479 KNPKEEQGRA--ITQQLFDLCCASQLLRFASPPLADAWC--RMTLDHRDQY-MVP 528


>gi|156932415|ref|YP_001436331.1| isovaleryl CoA dehydrogenase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530669|gb|ABU75495.1| hypothetical protein ESA_00194 [Cronobacter sakazakii ATCC BAA-894]
          Length = 544

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/522 (35%), Positives = 275/522 (52%), Gaps = 13/522 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD+ L   +    +    EL   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPVALNNSNLYLSDTALREAVLREGAGWDAELLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   GER D V FHPAWH L++    + +H   W        R+ A 
Sbjct: 59  GRLANANPPELLRYDARGERLDDVRFHPAWHLLMQGLFANRVHNLPW----LETAREGAL 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L    P +  DW   + S  YD       Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWQTPLASDRYDSHLLPGAQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K  + IG+G+TEK+GG+D+ + T++ + ++       Y L GHKWF S P SDA ++LAQ
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGPGEAYRLVGHKWFFSVPQSDAHLVLAQ 234

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E EF +  G+LLG+       
Sbjct: 235 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 294

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +   D A+ S   MR +LA A+++  +R   G  LIDQP+M++ +  +AL++  
Sbjct: 295 ILRMGGMTRFDCALGSHGLMRRALAVALYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 354

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            TAL FRLA ++++ +    E A+AR+  P  KY  CK     +AEAME +GG GY EE 
Sbjct: 355 QTALLFRLARAWEQ-RESPHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 413

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + R YRE P NSI  GSGN M LDVL +L +   + E L    +   G          +
Sbjct: 414 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSHEFDAVKGQDRHFDRAWRQ 473

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +  L + D+   R +T ++ L +S A + R+    +A  + 
Sbjct: 474 LAGQLRRPDEAAGRAITTQLFLLASGAQVLRSLTPPLAQAWC 515


>gi|238764702|ref|ZP_04625646.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC
           33638]
 gi|238697098|gb|EEP89871.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC
           33638]
          Length = 557

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/532 (32%), Positives = 274/532 (51%), Gaps = 19/532 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   +         ++L  +G  + S  + EL R+AN
Sbjct: 18  QTHLVFNQPEPLSNSNLFLSDMALREAVTRQQAGWDGEDLSRIGLQLGSQESLELGRLAN 77

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  +   +H   W        R+ +   RAA
Sbjct: 78  ANPPELLRYDAAGQRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARRGSFVARAA 133

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + 
Sbjct: 134 RFILHAQVEAGTLCPITMTFGAIPLLQQTLPSLFQSWLPPLLSDRYDSHQTVGDQKRGLL 193

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T++ + +        Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 194 IGMGMTEKQGGSDVLSNTTRAEPLEVRGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 253

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GNRSNA+ E+EF +   +LLG+       +  M 
Sbjct: 254 SCFFLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDHATAWLLGEEGDGIRQILKMG 313

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++A +R   G  L++QP+M++ ++ +AL +   TAL 
Sbjct: 314 GYTRFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALL 373

Query: 374 FRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            RLA+++   K     E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R
Sbjct: 374 MRLASAW--GKPGEVHEQIFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPR 431

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            YRE P NSI  GSGN M LDVL    K  +  + L        G +    +    L+  
Sbjct: 432 IYREMPVNSIWEGSGNIMCLDVLRTFRKLPSAIDVLQQEFYPVRGQNRLFDRSWRQLQQR 491

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
           +   KE++G A  +T+++     A+ L R     +AD +   R   +    +
Sbjct: 492 LKNPKEEQGRA--ITQQLFDLCCASQLLRFASPPLADAWC--RMTLDHRDQY 539


>gi|53720992|ref|YP_109978.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|53724026|ref|YP_104472.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67643102|ref|ZP_00441851.1| protein AidB [Burkholderia mallei GB8 horse 4]
 gi|121601096|ref|YP_994621.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385909|ref|YP_001027553.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126451248|ref|YP_001082549.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|167000125|ref|ZP_02265948.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|217423893|ref|ZP_03455393.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|254174798|ref|ZP_04881459.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254201549|ref|ZP_04907913.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254206885|ref|ZP_04913236.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|254357440|ref|ZP_04973714.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52211406|emb|CAH37397.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|52427449|gb|AAU48042.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121229906|gb|ABM52424.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124293929|gb|ABN03198.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126244118|gb|ABO07211.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147747443|gb|EDK54519.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147752427|gb|EDK59493.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|148026504|gb|EDK84589.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160695843|gb|EDP85813.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|217392956|gb|EEC32978.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|238524353|gb|EEP87786.1| protein AidB [Burkholderia mallei GB8 horse 4]
 gi|243063931|gb|EES46117.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 546

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 AYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|167834966|ref|ZP_02461849.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 564

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 171/545 (31%), Positives = 269/545 (49%), Gaps = 13/545 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ    +G NA+  D  L ++   F          LG    +  AQ+ AR+AN  
Sbjct: 21  THAVFNQAADPVGYNAFDDDVALSSITERFAPWAAGHASRLGALAGTAQAQDAARLANLY 80

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP L  +   G R D VEFHPAWH L+  +  + +H   W  +         H  RA + 
Sbjct: 81  TPVLKNFDRYGNRLDWVEFHPAWHQLMSWAFGNQVHSLAWTAT-----EPNGHFARAVQS 135

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+E G      +  AS+      P +   W  K    +YDP      QKT   I  
Sbjct: 136 YLWNQIENGVGCPTGMAYASVAGFRRYPELAA-WKEKTLQTQYDPRRLPIEQKTHAVIAY 194

Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            +TEK+GG+D+    +      +G    IY ++GHKWF S P++D    LA+ +  V CF
Sbjct: 195 AMTEKQGGSDLRETQTFAVPHENGEHGAIYLVTGHKWFCSVPVADGIYTLARTQAGVSCF 254

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +PR+L DG+ N +  QRLK+K GN+SNA+ E+E+ N +  L+G+       +     L 
Sbjct: 255 FMPRILPDGTTNRIFIQRLKDKAGNKSNASSEIEYRNAWAILVGEEGRGIREILSHAHLT 314

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD A+ S   MR +L  A+++A+ R   G  L +QP+ +  +AD+A+D  A+  ++ R+
Sbjct: 315 RLDFAVGSAGLMRHALTLALNHAQTRTAFGKPLAEQPIQEAVLADLAIDAEASMLMALRV 374

Query: 377 ANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           + + D  ++  + E A ARI  P+ K+W C+ A + + EA+E  GG+G+IEE  +AR YR
Sbjct: 375 SRATDGWEAGNAAEKALARIATPVAKFWNCRRAASFVVEALEVHGGNGFIEENPMARLYR 434

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E+P N+I  G+ N M +DV+  +++     + L        G++      + +L+ ++  
Sbjct: 435 EAPLNAIWEGTSNMMCMDVMRAMKREPQTLDALLDDFAGLAGANRFFDAHLGVLKATLDE 494

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
             E +G AR +   +ALA   A L R    ++AD F  +R  D        L       H
Sbjct: 495 GAEIEGNARRIASLMALALQGAELLRHSTAEVADAFCASRLHDGMGYVFGALKPTPALRH 554

Query: 554 IIDSL 558
           I+   
Sbjct: 555 IVRRA 559


>gi|126439329|ref|YP_001060948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|134281474|ref|ZP_01768182.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|226193162|ref|ZP_03788772.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814331|ref|YP_002898782.1| protein AidB [Burkholderia pseudomallei MSHR346]
 gi|126218822|gb|ABN82328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|134247141|gb|EBA47227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|225934762|gb|EEH30739.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504594|gb|ACQ96912.1| protein AidB [Burkholderia pseudomallei MSHR346]
          Length = 546

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|299530916|ref|ZP_07044330.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721137|gb|EFI62080.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 549

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 177/547 (32%), Positives = 284/547 (51%), Gaps = 20/547 (3%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ P     N Y+SD +L   +    +     EL+  G    +      A  AN+  P+L
Sbjct: 8   NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLRAAEEANHFEPEL 67

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H + P G+R D+V FHPAWH ++  +  +G+    +        R  A     A L++ +
Sbjct: 68  HTHSPSGDRIDQVRFHPAWHQMMTIARLNGISNLPFTDQ-----RPTAWAAYGASLFMHS 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+E+G     ++T AS+  +   P+++    P + S +YD  +     K S+ +G+G+TE
Sbjct: 123 QIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMGMTE 182

Query: 205 KRGGTDIAAITSQGQKIS--------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
           ++GG+D+ + T++   ++           Y ++GHKWF S+PM D  ++LA+ E R   C
Sbjct: 183 RQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERGPTC 242

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DGS N +  QRLK+K+GNRSN++ E+EF N +G L+G        + +M   
Sbjct: 243 FFVPRWRSDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEMATY 302

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD A+ S   MR +L +A+HY R RH  G  L +QPVM   +AD+AL+  AAT L+  
Sbjct: 303 TRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWLAMD 362

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA  F      + + A+ RI+ P  K+W CK A     EAME  GG+GY+E   + R +R
Sbjct: 363 LAARF--GSEDALDQAWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGRLFR 420

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + +  +    L   L +        +  +  LR++++L
Sbjct: 421 EAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHLREVGSEEAVLRAQVDKLREAVTL 480

Query: 494 -CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552
             +E +  AR  T+++A    A  + +   +D A  F+ +RF  +      +  G  + A
Sbjct: 481 PPQELEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRFDPDWGPVAGVACGSSDPA 540

Query: 553 HIIDSLY 559
            ++ + +
Sbjct: 541 ALLRNAW 547


>gi|167904835|ref|ZP_02492040.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
          Length = 546

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 AYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|311105191|ref|YP_003978044.1| protein AidB [Achromobacter xylosoxidans A8]
 gi|310759880|gb|ADP15329.1| protein AidB [Achromobacter xylosoxidans A8]
          Length = 553

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 179/550 (32%), Positives = 273/550 (49%), Gaps = 18/550 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P     + Y +D  L   +    +     +L   G ++      E    AN 
Sbjct: 6   THAVSNQVPPLEDYSLYETDPALREAVRREGAQAWVSDLAAHGAWLGRAQTLEAGAQANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L +Y  GG R D+VEFHP+W+ L+   +  GLH   W +         A   RAA 
Sbjct: 66  CPPRLISYDRGGHRIDRVEFHPSWNLLMGGIMARGLHSRAWAQP-----EPGAQVARAAA 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTP----RVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +  Q+EAG L   ++T A++  L   P         W   ++SRE+D  +     K S
Sbjct: 121 YVMQGQVEAGTLCPTTMTFAAVPLLQREPPGVVDFGGQWLNALYSREFDGADAPLAAKRS 180

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
             IG+GLTEK+GG+D+ A+T++   +        Y L GHKWF S P +DA ++LAQ + 
Sbjct: 181 ALIGMGLTEKQGGSDLRAVTTRATPVGAAGRGRAYLLVGHKWFFSVPQADAHLVLAQTDE 240

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR + DG  N +  +RLK+K+GNRSNA+ E+EF + +G ++G+       + +
Sbjct: 241 GLSCFFVPRWIPDGPRNAVRVRRLKDKLGNRSNASAEVEFEDAWGVMVGEPGRGLTVLLE 300

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  + S + +R +L +++H+AR R   G  LIDQP+M+  + D+AL+  AA A
Sbjct: 301 MAATTRLDCVLGSAALLRQALVQSVHHARHRRAFGKPLIDQPLMRNVLVDLALESEAAMA 360

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  RLA + DE ++ +   A  R+  P  K W CK A A +AE ME  GG+GY+++  + 
Sbjct: 361 LGLRLARAVDE-RADASARALVRVGTPAAKLWVCKRAIAAVAECMEVCGGNGYVDDGPMP 419

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRD 489
           R YRE+P NSI  GSGN M LDVL  L++       L     Q  G        +T  R 
Sbjct: 420 RLYRETPVNSIWEGSGNVMALDVLRALQREAAALPALEREFGQATGQYQDFDDALTRWRA 479

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
            ++   + +  AR +   +A    AA L +     +A  F  +R  +        L    
Sbjct: 480 LLADEAQAEFQARRIAAGLARLWQAALLIQHAPAPVAQAFAASRL-NTRGGVFGELAAGT 538

Query: 550 NAAHIIDSLY 559
           +A  I+   +
Sbjct: 539 DAQAILARAW 548


>gi|291619081|ref|YP_003521823.1| AidB [Pantoea ananatis LMG 20103]
 gi|291154111|gb|ADD78695.1| AidB [Pantoea ananatis LMG 20103]
          Length = 542

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/526 (35%), Positives = 281/526 (53%), Gaps = 12/526 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD  L   +         E L  +G  + S  + EL R+AN 
Sbjct: 5   THTVFNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+LH Y   G R D V FHPAWH L++      LH   W    +P V+  A   RAAR
Sbjct: 65  SPPELHRYDARGVRLDDVRFHPAWHVLMQGLCASRLHNLSW----QPDVQPNASVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T A++  L    P   + W   + S  YD       QK  + I
Sbjct: 121 FILHAQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+   T++ + +        Y + GHKWF S P SDA ++LAQ +  + 
Sbjct: 181 GMGMTEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL DGS N +  +RLK+K+GNRSNA+ E+EF    G+LLG+       +  M  
Sbjct: 241 CFFLPRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFREATGWLLGEEGEGVRLILKMAG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD A+ S   MR + + A+++A +R V G  L+DQP+M++ +A  AL +   TAL  
Sbjct: 301 MTRLDCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLL 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++  + +   EAA+AR+  P  KY  CK     IAEAME +GG GY E+  + R Y
Sbjct: 361 RLARAW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R+ P NSI  GSGN M LDVL ++ + +   + L    +   G +     +  + ++ L 
Sbjct: 420 RDIPVNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLS 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           K D+  AR LT+++   ++AA L +     +AD +  +++LD   +
Sbjct: 480 KMDESQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLDPRGT 524


>gi|126454558|ref|YP_001068248.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242314546|ref|ZP_04813562.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|126228200|gb|ABN91740.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|242137785|gb|EES24187.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 546

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 AYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            +AA ++   Y
Sbjct: 534 VDAAALLQRAY 544


>gi|332308244|ref|YP_004436095.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175573|gb|AEE24827.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 549

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 190/539 (35%), Positives = 284/539 (52%), Gaps = 8/539 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP +    N ++ DSLL   +  N      + LE  G +V+     +    AN 
Sbjct: 9   THEVENQPEIMSPYNLWTCDSLLQTAVKLNGGQHAEQTLENYG-HVVGHQLMDAGEQANR 67

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P    +   G R D VEFHPA+H L+  ++   +H   W        +K AH +RAA 
Sbjct: 68  HKPIFQPFDRYGRRTDTVEFHPAYHELMTAAMQAQVHAYSWRNP----SQKGAHVVRAAL 123

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +++  Q +AG     ++T A++  L  +P     W  K+ + EYDP      +K  + +G
Sbjct: 124 MFMHYQADAGTSCPLTMTHAAVAVLNQSPNFPAFWTQKLINGEYDPRALPAEKKHGITLG 183

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GG+D+   T+Q  K  DG Y + GHK+F S+P+ DA ++LAQ E  + CFL+P
Sbjct: 184 MGMTEKQGGSDVRRNTTQAIKQPDGNYHVIGHKFFFSAPLCDAHLILAQTENGLTCFLLP 243

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R+L DG  N +  QRLK+K+G+ SNA+ E+EF     +L+G+       + DM  L  LD
Sbjct: 244 RILPDGQLNQVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGQGVKMIIDMVSLTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I S + MR +L +A+H+ + R   G  LIDQP+MK  +AD+ L++AA+ AL+ R+A +
Sbjct: 304 CMIGSTALMRQALVQALHHTQNREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVAKA 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A S   EA ++RI   I KYW CK  PA + EA EC+GG GY+EE  + R YR++P 
Sbjct: 364 VDLASSNKHEAGFSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENVMPRLYRQAPL 423

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497
           NSI  GS N   LDVL  L K   +   LF  L    G +    + +  L+ + +  +  
Sbjct: 424 NSIWEGSANVQCLDVLRALRKEPEVKTALFDELSTAAGKNSYYDQHLVALKHAFNEPETL 483

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  +R + EK+AL    A L      D+AD F   R   N       L        II+
Sbjct: 484 EVRSRLVVEKMALGLQGALLLNGDDKDLADTFCHARLGGNQGLIFGTLPANSPLDAIIN 542


>gi|160895569|ref|YP_001561151.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361153|gb|ABX32766.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 564

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 179/559 (32%), Positives = 277/559 (49%), Gaps = 19/559 (3%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQE 72
           Q     ++   LNQ       N   +D  L   +    +  H   L    + +      E
Sbjct: 8   QTGHTWNTHDVLNQVDELTDFNLLEADPALAEALQRNGAARHIPSLSRYAQQLGERATWE 67

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           LA  AN +TP+LH +   G   D VEFHP+WH LL      GL    ++ S         
Sbjct: 68  LAEQANRHTPELHRFDARGRIIDAVEFHPSWHTLLGLYRQQGLISLPFEDSSA-----GR 122

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
               AA  YL  Q+E G L   ++T+A++  L   P + +    K+FS EYDP +     
Sbjct: 123 WSAWAAGFYLHGQVEQGTLCPATMTTAAIPLLQKEPALWQQLQGKLFSHEYDPRDLPVGD 182

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           K S+ +G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+
Sbjct: 183 KASMWLGMGMTEKQGGSDVRANTTVAMPVHAGGRGGEYLLRGHKWFFSAPMCDAHLVVAR 242

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +   G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+EF + +G L+G+     
Sbjct: 243 MGESGGQACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNSSSEVEFEDAWGILMGEEGRGI 302

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     L+  + S + +R +  +A+ YARRR V G +L +QP+M+  +AD+AL+ 
Sbjct: 303 PTIIEMATYTRLNCVLGSAAILRSATVQALAYARRRSVFGKLLAEQPLMRTVLADLALES 362

Query: 367 AAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            AA  ++ RLA +++    +    E A+ RIM P  K W CK    +  EAME +GG+GY
Sbjct: 363 EAALQIAMRLAQAYERGGDEGDPLERAWKRIMTPAAKLWVCKRGVELTGEAMEVLGGNGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG---SSGK 481
           ++   +AR +RE+P NSI  GSGN M LDVL  + +  +  + L   L        +  +
Sbjct: 423 VDTGVMARLFREAPVNSIWEGSGNVMCLDVLRAISREPDGAQLLLQDLIDTAAGEPALLQ 482

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS- 540
           +  ++ R       + +  AR L + + L + A  L R     +AD F+  R      + 
Sbjct: 483 QAQSLARRLSGPPDQLEAQARRLVQDLVLLAQACLLRRHAPPAMADGFIATRLGAQQGAM 542

Query: 541 -THCMLHGRFNAAHIIDSL 558
                     + A I+   
Sbjct: 543 VAGAFDPAGLDIAAIVQRA 561


>gi|327395413|dbj|BAK12835.1| protein AidB [Pantoea ananatis AJ13355]
          Length = 542

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/526 (35%), Positives = 282/526 (53%), Gaps = 12/526 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD  L   +         E L  +G  + S  + EL R+AN 
Sbjct: 5   THTVFNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+LH Y   G R D V FHPAWH L++      LH   W    +P V+  A   RAAR
Sbjct: 65  SPPELHRYDARGVRLDDVRFHPAWHVLMQGLCASRLHNLSW----QPDVQPNASVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T A++  L    P   + W   + S  YD       QK  + I
Sbjct: 121 FILHAQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+   T++ + +        Y + GHKWF S P SDA ++LAQ +  + 
Sbjct: 181 GMGMTEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL DGS N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  +  
Sbjct: 241 CFFLPRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFRDATGWLLGEEGEGVRLILKIAG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD A+ S   MR + + A+++A +R V G  L+DQP+M++ +A  AL +   TAL  
Sbjct: 301 MTRLDCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLL 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++  + +   EAA+AR+  P  KY  CK     IAEAME +GG GY E+  + R Y
Sbjct: 361 RLARAW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R+ P NSI  GSGN M LDVL ++ + +   + L    +   G +     +  + ++ L 
Sbjct: 420 RDIPVNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLS 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           K D+  AR LT+++   ++AA L +     +AD +  +++LD   +
Sbjct: 480 KMDESQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLDPRGT 524


>gi|187930703|ref|YP_001901190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187727593|gb|ACD28758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 553

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 183/551 (33%), Positives = 287/551 (52%), Gaps = 17/551 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN 
Sbjct: 6   THRVFNQVPDLTGFNPFTSDATLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANS 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D + F PAWHALL      GL    +        R  A   R A 
Sbjct: 66  YHPELHTHSRTGERIDAIRFDPAWHALLGLMRSQGLQALPFADP-----RPGAWAARTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G
Sbjct: 121 YFMQAQIESGTLCPATMTFASIPVLQNETALFADLGPRLYAREHDARDLPWRQKTAILVG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR
Sbjct: 361 MMELGNAFERADVDPLAAAWKRIVTPAAKFWVCKRTVEATGEAMEVWGGNGYVEEGPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSG-KKVITILRDS 490
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + E+  G    +  +  L+  
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIARTPDDALRLVHDIGERAHGHRAVRAELAALQAM 480

Query: 491 ISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG-R 548
           +    +  +  AR + + +AL + AA +      D A+ F+ +RF          L G  
Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRFHHQHGRVFGTLDGHA 540

Query: 549 FNAAHIIDSLY 559
                ++   +
Sbjct: 541 QELGAVLQRAW 551


>gi|262380086|ref|ZP_06073241.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           radioresistens SH164]
 gi|262298280|gb|EEY86194.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           radioresistens SH164]
          Length = 549

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 165/548 (30%), Positives = 275/548 (50%), Gaps = 15/548 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ       N + +D +L  ++    S    +L  LG    S    + A  AN  
Sbjct: 6   THQIQNQFDELQDYNLFDTDPVLQEILQRHQSQDQAKLSQLGAIAGSAEYYQYAEQANRY 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L A+   G R D +EFHPAWH  +  +    +H   + +  +     Q     AAR 
Sbjct: 66  TPELKAFDARGRRCDVIEFHPAWHQWMALNRSYEVHAYPFIKPDD----AQGWLNWAARF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+E G L   ++T  S+  L   P + +    K+ S+ YD  +    QK S+ +G+
Sbjct: 122 YLNGQIECGSLCPTAMTLGSIPLLQREPALWQQLGDKLLSQHYDARDLPISQKKSIWLGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           G+TEK+GG+D+ A  ++   +        Y ++GHKWF S+PM DA +++A  E   + C
Sbjct: 182 GMTEKQGGSDVRANQTKAVPVGQHGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLAC 241

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR L+DG  N +  QRLK+K+GNRSN++ E+EF   +G +LG+       + +M   
Sbjct: 242 FFVPRWLDDGRKNSIHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAY 301

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + S + +R +L + + Y R+R   G  L  QP+M+  + D+AL+  AA  L+  
Sbjct: 302 TRLTCVVGSSAMLRQALVQCLTYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMH 361

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA  + +    S+  A+ R+M P  K+W CK    +  EAME  GG+GY+E   ++R +R
Sbjct: 362 LACCYQKDDPLSK--AWQRLMTPAAKFWICKRVVELSGEAMEIFGGNGYVETGIMSRIFR 419

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSIS 492
           E+P NSI  GSGN M LDVL  +++     E L  +     QD     +++  +L+    
Sbjct: 420 EAPVNSIWEGSGNVMCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQ 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML-HGRFNA 551
              + + +AR L  ++ + + A  L +   + +A+ F++ R+         ++     + 
Sbjct: 480 SPDQLQFMARTLVSRLVILAQAVLLKKYAPDFVANAFIQTRYTAFHGRVTGLIDPHLVDM 539

Query: 552 AHIIDSLY 559
             I++  +
Sbjct: 540 QRILERAF 547


>gi|293604433|ref|ZP_06686840.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292817310|gb|EFF76384.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 561

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 174/553 (31%), Positives = 275/553 (49%), Gaps = 17/553 (3%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQ 71
           +       +    NQ P+    + Y +D  L   +          +L   G ++      
Sbjct: 6   STTSATFATHTVQNQVPVLEDYSLYDTDPALREAVRREGGQAWDGDLAAHGAWLGRAQTL 65

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
              + AN   P+L AY  GG R D V+FHPAW+ L+   +  GLH   W +         
Sbjct: 66  AAGQEANRCPPRLVAYDRGGHRIDHVDFHPAWNLLMGGILARGLHSRAWAQPV-----PG 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTN 187
           A   RAA   +  Q+EAG L   ++T A++  L   P         W P ++SRE+DP +
Sbjct: 121 AQVARAAAYLMQGQVEAGTLCPTTMTFAAVPLLQREPAGAVDFAGQWLPALYSREFDPAD 180

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAF 243
                K S  IG+GLTEK+GG+D+ A++++   +        Y L GHKWF S P +DA 
Sbjct: 181 APLTAKRSALIGMGLTEKQGGSDLRAVSTRAAPLGASGRGNAYQLVGHKWFFSVPQADAH 240

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++LAQ +  + CF VPR + +G  N +  +RLK+K+GNRSNA+ E+EF N +G ++G+  
Sbjct: 241 LVLAQTDEGLSCFFVPRWIPEGPRNAIRVRRLKDKLGNRSNASAEVEFENAWGVMVGEPG 300

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +M     LD  + S + +R ++ +++H+A+ R   G  LI QP+M+  +AD+A
Sbjct: 301 RGLAVLLEMAATTRLDCVLGSAALLRQAVVQSLHHAQHRQAFGKPLIAQPLMRNVLADLA 360

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+  AA  L+ RLA + DE ++ +   A  R+  P  K W CK A   IAE ME  GG+G
Sbjct: 361 LESEAAMVLALRLARAVDE-RADASSRALVRVGTPAAKLWICKRAINAIAECMEVWGGNG 419

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KK 482
           Y+EE  + R YRE+P NSI  GSGN M LDVL  L++  +    L       + +    +
Sbjct: 420 YVEEGPMPRLYREAPVNSIWEGSGNVMALDVLRALQREPDAMPALDREFAPAMHNEAYAR 479

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
            +   R  ++   + +  AR +   +A    AA L +   + ++  F+ +R   +     
Sbjct: 480 ALAAWRTLLADAPQAEFQARRIACGLARLWQAALLIQHAPSAVSQAFVASRLRAD-GGIF 538

Query: 543 CMLHGRFNAAHII 555
             L    +   I+
Sbjct: 539 GELPADTDTTAIL 551


>gi|167740775|ref|ZP_02413549.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 538

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 185/545 (33%), Positives = 278/545 (51%), Gaps = 21/545 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAH 553
            +AA 
Sbjct: 534 VDAAA 538


>gi|34499591|ref|NP_903806.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105442|gb|AAQ61797.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
          Length = 547

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 188/550 (34%), Positives = 278/550 (50%), Gaps = 21/550 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N + +D+ L   + +         L   GE +      ELA  AN
Sbjct: 4   QTHEVNNQYEELQDYNPFETDAALKEAVIHAGAGWALPWLAEYGERLGRAETFELAAQAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              PQL A+   G R D+V+FHP+WH LL      GL    +D       R        A
Sbjct: 64  RFAPQLQAFDRRGRRIDRVDFHPSWHDLLALYRSQGLVSLPFDSE-----RPGRWAAFLA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T A++  L   P +      K+ SRE+D  +    +KT++ +
Sbjct: 119 GFYLHGQVEAGTLCPATMTQAAIPLLKREPALWAQLGDKLLSREHDARDLPAERKTAIWL 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRV 253
           G+G+TEK+GG+D+ + TS           G Y L GHKWF S+PMSDA +++AQ  +G  
Sbjct: 179 GMGMTEKQGGSDVRSNTSTATPTGAGGRGGEYTLRGHKWFFSAPMSDAHLVVAQLRDGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 239 SCFYVPRWRPDGSRNAVAIQRLKDKVGNRSNASSEVEFHDAWGVLIGEPGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L   I S + +R  L +AI YARRR   G  L +QP+M+  +AD+AL+  AA  L+
Sbjct: 299 TYTRLSCVIGSAALIRQGLVQAIAYARRRVAFGKRLAEQPLMRGVLADLALESEAALCLA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA  F+      +E A+ RI+ P  K+W CK A   + E ME  GG+GY+++  +AR 
Sbjct: 359 ARLAEGFEN-----DEPAWKRIVTPAAKFWVCKRAVEAVGETMEVFGGNGYVDDGPMARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  L++    +++L   L    G   +    +  LR   
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRALQREPEAWQRLQQELAALAGGDRRLSAALADLRSMA 473

Query: 492 SL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHGRF 549
           SL   + +GL R   +++AL      L       +AD F+ +R  D         L  R 
Sbjct: 474 SLSPPQLEGLGRRFAQQLALTVQGCLLRGRAPAAVADGFIASRLADGLWGRVAGALDARA 533

Query: 550 NAA-HIIDSL 558
             A ++++  
Sbjct: 534 AGADYLLERA 543


>gi|167571746|ref|ZP_02364620.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 546

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 184/551 (33%), Positives = 279/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ    I  N +++D  L   +     S     L+  G  + +    + A  AN
Sbjct: 4   STHAVSNQFDELIDYNLFATDPALGEALERAGASWAAPRLDAYGARLGARDTAQRAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +        R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYRGQGLISLAFRD-----ARAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T A +  L   P +      K++S  +DP +     K S+ +
Sbjct: 119 GFYLHGQIEAGTLCPATMTQAGIPVLQKEPALWAQLKDKLYSDVHDPRDVPIDAKQSITL 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTVAAPVGAGGRGGDYLLRGHKWFFSAPMCDAHLVVARTESGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVLIQRLKNKVGNRSNSSSEVELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 NYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+       E A+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFER-----REPAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHALGGRDARIRAELDALRALL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDAREALGRVLAQRIALVAQACLLLDAAPAAVSDGFITTRFGEPVWGRVTGALDSRR 533

Query: 549 FNAAHIIDSLY 559
            + A ++   Y
Sbjct: 534 VDVAALLQRAY 544


>gi|270265008|ref|ZP_06193271.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13]
 gi|270040942|gb|EFA14043.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13]
          Length = 542

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 176/517 (34%), Positives = 262/517 (50%), Gaps = 11/517 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD+ L   +    +    + L  LG+ + +  + EL R+AN 
Sbjct: 5   THTVFNQPKPLGNSNLFLSDTPLREALQREQAGWDADVLASLGQQLGTQESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  Y   G+R D V FHPAWH L++  I + +H   W        R  A   RAAR
Sbjct: 65  NPPELLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGAFVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T  ++  L    P   + W   + S  YD       QK  + I
Sbjct: 121 FVLHAQVEAGTLCPVTMTFGAIPLLRRLLPSEFQSWLSPLLSDRYDAHLSPGGQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+ + T+    +    S   Y L GHKWF S P SDA ++LAQ EG + 
Sbjct: 181 GMGMTEKQGGSDVLSNTTTATPLTARGSGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +LLG+       +  M  
Sbjct: 241 CFFLPRILPDGTRNAIRLERLKDKLGNRSNASSEVEFQDATAWLLGEEGDGVRHILKMGG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L   D A+ S   MR +L+ A+++  +R   G  LI+ P+M++ +  +AL +   TA   
Sbjct: 301 LTRFDCALGSHGLMRRALSVALYHTLQRQAFGKTLIEHPMMRQVLGRMALRLEGQTAALM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D A     E A  R++ P  K+  C+     + EAME +GG GY EE  + R Y
Sbjct: 361 RLARAYDSA-DDPLEQALCRVLTPAAKFEVCRQGIPFVGEAMEALGGLGYCEESELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDV+    +   + E L     +  G +    +   R S  + 
Sbjct: 420 REMPVNSIWEGSGNIMCLDVMRAWGRLPAVQEALEREFGEVKGQNRHFDLQWRRLSQLMR 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           K  +   R +T  +     AA L R     +A+ + +
Sbjct: 480 KPHEEQGRAVTSTLFNLFVAAQLLRYSSPPLAEAWCQ 516


>gi|255321229|ref|ZP_05362395.1| protein AidB [Acinetobacter radioresistens SK82]
 gi|255301783|gb|EET81034.1| protein AidB [Acinetobacter radioresistens SK82]
          Length = 549

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 166/548 (30%), Positives = 275/548 (50%), Gaps = 15/548 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ       N + +D +L  ++    S     L  LG    S    + A  AN  
Sbjct: 6   THQIQNQFDELQDYNLFDTDPILQEILQRHQSQDQARLSQLGTIAGSAEYYQYAEQANRY 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L A+   G R D +EFHPAWH  +  +    +H   + +  +     Q     AAR 
Sbjct: 66  TPELKAFDARGRRCDVIEFHPAWHQWMALNRSYEVHAYPFSKPDD----AQGWLNWAARF 121

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+E G L   ++T  S+  L   P + +    K+ S+ YD  +    QK S+ +G+
Sbjct: 122 YLNGQIECGSLCPTAMTLGSIPLLQREPALWQQLGDKLLSQHYDVRDLPIDQKKSIWLGM 181

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           G+TEK+GG+D+ A  ++   +        Y ++GHKWF S+PM DA +++A  E   + C
Sbjct: 182 GMTEKQGGSDVRANQTKAVPVGQRGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLAC 241

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR LEDG  N +  QRLK+K+GNRSN++ E+EF   +G +LG+       + +M   
Sbjct: 242 FFVPRWLEDGRKNSIHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAY 301

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + S + +R +L + + Y R+R   G  L  QP+M+  + D+AL+  AA  L+  
Sbjct: 302 TRLTCVVGSSAMLRQALVQCLAYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMH 361

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA+ + +    S+  A+ R+M P  K+W CK    +  EAME  GG+GY+E   +AR +R
Sbjct: 362 LASCYQQDDPLSK--AWQRLMTPAAKFWICKRVVELSGEAMEVFGGNGYVETGIMARIFR 419

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSIS 492
           E+P NSI  GSGN M LDVL  +++     E L  +     QD     +++  +L+    
Sbjct: 420 EAPVNSIWEGSGNVMCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQ 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH-GRFNA 551
              + + +AR L  ++ + + A  L +   + +A+ F++ R+         ++     + 
Sbjct: 480 SPDQLQFMARTLVSRLVMLAQAVLLKKYAPDFVANAFIQTRYTAFHGRVTGLIDLHLVDM 539

Query: 552 AHIIDSLY 559
             +++  +
Sbjct: 540 QRVLERAF 547


>gi|241664892|ref|YP_002983252.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240866919|gb|ACS64580.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 553

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 181/551 (32%), Positives = 285/551 (51%), Gaps = 17/551 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN 
Sbjct: 6   THRVFNQVPDLTGFNPFTSDTTLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANT 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D + F PAWHALL      GL    +        R  A   R A 
Sbjct: 66  YHPELHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFADP-----RAGAWAARTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G
Sbjct: 121 YFMQAQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVATPLRGEARGATYAITGHKWFFSAPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR
Sbjct: 361 MMELGNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + +        +  +  L+  
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIARTPDDALRLVHDIAERAQGHRAVRAELAALQAM 480

Query: 491 ISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG-R 548
           +    +  +  AR + + +AL + AA +      D A+ F+ +RF          L G  
Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRFYHQHGRVFGTLDGHA 540

Query: 549 FNAAHIIDSLY 559
                ++   +
Sbjct: 541 QELGAVLQRAW 551


>gi|167838409|ref|ZP_02465268.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 546

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 184/551 (33%), Positives = 280/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L  AL     +     L+  G  + +    + A  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALDRAGAAWAAPRLDAFGARLGARDTAQQAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDIHDPRDAPIDAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGACGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRVQRLKNKVGNRSNSSSEVELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWMRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHALGGHDARIRAELDALRALL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R   ++IAL + A  L  A    ++D F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVPAQRIALVAQACLLIDAAPAAVSDGFIATRFGEPAWGRVMGALDARR 533

Query: 549 FNAAHIIDSLY 559
            + A ++   Y
Sbjct: 534 VDVAALLQRAY 544


>gi|91788426|ref|YP_549378.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91697651|gb|ABE44480.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 579

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 197/577 (34%), Positives = 297/577 (51%), Gaps = 43/577 (7%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP      N + ++  L   +  N P++   EL  LG  + S   Q  AR+AN 
Sbjct: 4   THEVFNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANI 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-------- 131
           + P+LH++   G R D+VEFHP++H L++ +I  GLH + W       + +         
Sbjct: 64  HAPELHSHDRFGRRLDQVEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAP 123

Query: 132 --------------------AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                                H +RAA   L  +LE   L   S+T A   AL +   ++
Sbjct: 124 KGKRVRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEPSVLCPISMTYAVTPALRSNAAIY 183

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGI---YC 227
            DWAP +  R YD   K    K  + +G+G+TEK+GG+D+ A T++ +    DG    Y 
Sbjct: 184 ADWAPGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGARYT 243

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           L+GHKWF S+PM DAF++LAQ    + CF +PR+L DGS N +  QRLK+K+GN++NA+ 
Sbjct: 244 LTGHKWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASS 303

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           E+EF     +L+G+       + +M  +  LD A+ +   MR +L+ A+++  +R   G 
Sbjct: 304 EVEFEGAQAWLVGEEGRGIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGK 363

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           +LIDQP+M+  +AD+AL+  AATAL+ RLA +F +  + + EA  AR++ PI K+W CK 
Sbjct: 364 LLIDQPLMRNVLADLALESEAATALALRLARAF-DRAADAHEAVMARLLTPIAKFWICKR 422

Query: 408 APAVIAEAMECIGGSGYIEERSI---ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                 EAMEC+GG+GY+EE  +   AR YRE P NSI  G+GN M LD+L  L K  + 
Sbjct: 423 GSHFAQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRK-ADA 481

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKED---KGLARFLTEKIALASSAAALYRAG 521
              L   L    G+     +  L  ++    E    +  AR L + +ALA  AA L +  
Sbjct: 482 VAALEHELSAARGA--HPALDRLAAALPTRVEQMATELEARRLAQDVALAVQAALLLQTA 539

Query: 522 MNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
              +   F ++R   N   T   L    +   II   
Sbjct: 540 PAPVFSAFCDSRISGNWGQTFGTLAAGTDFDTIIARA 576


>gi|309780304|ref|ZP_07675055.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921007|gb|EFP66653.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 553

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 181/551 (32%), Positives = 285/551 (51%), Gaps = 17/551 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANY 79
           +    NQ P   G N ++SD+ L   +       +   L+  G+ + +    + A  AN 
Sbjct: 6   THRVFNQVPDLTGFNPFTSDTTLQGALERLGGGWNAGALQAFGDQLGAPETLQWAAEANT 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D + F PAWHALL      GL    +        R  A   R A 
Sbjct: 66  YHPELHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFADP-----RAGAWAARTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D  P++++RE+D  +    QKT++ +G
Sbjct: 121 YFMQAQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y ++GHKWF S+PM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L N+F+ A      AA+ RI+ P  K+W CK       EAME  GG+GY+EE  +AR
Sbjct: 361 MMELGNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + +        +  +  L+  
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIARTPDDALRLVHDIGERAQGHRAVRAELAALQAM 480

Query: 491 ISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG-R 548
           +    +  +  AR + + +AL + AA +      D A+ F+ +RF          L G  
Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRFHHQHGRVFGTLDGHA 540

Query: 549 FNAAHIIDSLY 559
                ++   +
Sbjct: 541 QELGAVLQRAW 551


>gi|167826352|ref|ZP_02457823.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
          Length = 531

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 182/538 (33%), Positives = 274/538 (50%), Gaps = 20/538 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG 547
               +  + L R L ++IAL + A  L  A    ++D F+  RF +         L  
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDA 531


>gi|121592516|ref|YP_984412.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604596|gb|ABM40336.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 551

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 182/551 (33%), Positives = 279/551 (50%), Gaps = 18/551 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P     +  ++D+ L   +           L+     +       LA  AN 
Sbjct: 5   THQVFNQYPELNDYHPLATDAALCEALERAGADWARPALDAYAARLGMAETYALAEQANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TPQL  +   G+R D +EFHPAWH L+     +GL    +        R       AA 
Sbjct: 65  HTPQLQRFDTRGQRIDALEFHPAWHQLMALYRGEGLISRPFQDE-----RPGRWSAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T A++  L   P + +    +++S  YDP +     K S+ +G
Sbjct: 120 FYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTAYDPRDLPVADKASIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           +G+TEK+GG+D+ A T+    I      G Y L GHKWF S+P  DA +++A+    G  
Sbjct: 180 MGMTEKQGGSDVRANTTVATPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVARTGEGGPF 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 240 ACFYVPRWRLDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGIPTIIEMA 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R +  +AIHYARRRH  G  L +QP+M+  +AD+AL+  AA  L+
Sbjct: 300 SYTRLNCVVGSAAILRQATVQAIHYARRRHAFGKALAEQPLMRAVLADLALESEAALHLA 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++ E  S   + A+ R+M P  K+W CK A  +  EAME +GG+GY+E+  +AR 
Sbjct: 360 MRLAQAY-EHDSTPAQRAWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVEDGVMARL 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RE+P NSI  GSGN M LDVL  L++       L + L        +       L+  +
Sbjct: 419 FREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAARELQALL 478

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTHCMLHGR- 548
           +   E  +GL R LT+++ L + A  L +     +AD F+  R  D         +  R 
Sbjct: 479 ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADSGAGRVAGAIDTRG 538

Query: 549 FNAAHIIDSLY 559
            + A ++   +
Sbjct: 539 LDVAAVLARAF 549


>gi|148256072|ref|YP_001240657.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146408245|gb|ABQ36751.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation
           damage) [Bradyrhizobium sp. BTAi1]
          Length = 547

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/547 (38%), Positives = 302/547 (55%), Gaps = 8/547 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQE 72
           + QPS ++    NQ P F  +N +++D  LV  + A   +    EL   G    S    E
Sbjct: 1   MTQPSFETHDVFNQSPPFADVNLFTADRPLVDAVTAYGAAGTEPELAAFGALWGSAEMAE 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN NTP+L ++   G R D VEFHPA+H ++ R++  GLH S W     P     +
Sbjct: 61  QGRLANENTPKLRSFDAKGFRRDVVEFHPAYHQMMARAVEAGLHNSTWTSEGRPRGAP-S 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAA+ Y+ AQ+E+GHL   ++T AS+ AL   P +     P I +R YD       Q
Sbjct: 120 EVVRAAKFYIAAQVESGHLCPITMTRASVAALAAQPDLLAKSMPVIATRHYDAAFAPWWQ 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + +G+G+TEK+GGTD+ A  +  ++  DG Y ++GHKWF+S+PM DAF++LAQ E  
Sbjct: 180 KRGMTLGMGMTEKQGGTDVRANMTTAERAGDG-YRITGHKWFMSAPMCDAFLVLAQAESG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DG+ N L +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LTCFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAVRVGEEGRGIRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + A  AL
Sbjct: 299 VQLTRQDCAISSAGLMRSGLAHALHHARHRSVFQKRLADQPLMQAVLADMALHVEATVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FD      +EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDRTPDDLKEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSI 491
           H+RESP N+I  GSGN M LDVL  L +  +    +   L  D  G  G           
Sbjct: 419 HFRESPVNAIWEGSGNVMCLDVLRALSREADAAMAILKYLAADTNGLPGAAAAVAAIGQA 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
               + + +AR   EK+AL ++AAAL +      A++F   R      S +  +    + 
Sbjct: 479 FRRGDSERVARLAVEKLALLAAAAALNKVTPRH-AELFAATRLAAVHPSMYGAVD--LDP 535

Query: 552 AHIIDSL 558
           A I D L
Sbjct: 536 ADIRDLL 542


>gi|157368687|ref|YP_001476676.1| isovaleryl CoA dehydrogenase [Serratia proteamaculans 568]
 gi|157320451|gb|ABV39548.1| acyl-CoA dehydrogenase domain protein [Serratia proteamaculans 568]
          Length = 544

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/537 (33%), Positives = 266/537 (49%), Gaps = 14/537 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMAN 78
           ++    NQP      N + SD+ L   +    +    E L  LG+ + +  + EL R+AN
Sbjct: 4   NTHTVFNQPKPLGNSNLFLSDTALHEAVQREQAGWDVEVLASLGQQLGTQESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D V FHPAWH L++  I + +H   W        R  +   RAA
Sbjct: 64  ANPPELLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  + P   + W   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFGAIPLLQRSLPTEFQSWLTPLLSDRYDAHVLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQG----QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + T+       +     Y L GHKWF S P SDA ++LAQ +G +
Sbjct: 180 IGMGMTEKQGGSDVLSNTTTASPLAARGPGEAYRLVGHKWFFSVPQSDAHLVLAQADGGL 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR+L DG+ N +  +RLK+K+GNRSNA+ E+EF +   +L+G+       +  M 
Sbjct: 240 SCFFLPRILPDGTRNAIRLERLKDKLGNRSNASGEVEFQDASAWLVGEEGDGVRHILKMG 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   D A+ S   MR  L+ A+++A +R   G  LI+QP+M++ +A +AL +   TA  
Sbjct: 300 GLTRFDCALGSQGLMRRGLSVALYHALQRQAFGKPLIEQPMMRQVLARMALRLEGQTAAL 359

Query: 374 FRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            RLA ++D        E A  R+M P  K+  C+     I EAME +GG GY EE  + R
Sbjct: 360 MRLARAYDSIGVGAPLEQALCRVMTPAAKFEVCRQGIPFIGEAMEALGGIGYCEESELPR 419

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE P NSI  GSGN M LDV+    K   + E L     +  G +        +    
Sbjct: 420 LYREMPVNSIWEGSGNIMCLDVMRAWGKLPVVQEALELEFGEVRGQNRHFDRQWRQLLQL 479

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           + K  +   R +T  +    +AA L R     +A+ + +         T   L  R 
Sbjct: 480 MRKPQEEQGRAVTGALFNLFAAAQLLRYSSPPLAEAWCQMMLDIRGERT---LPDRL 533


>gi|86749547|ref|YP_486043.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86572575|gb|ABD07132.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 549

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 206/542 (38%), Positives = 301/542 (55%), Gaps = 6/542 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQE 72
           + QPS  +    NQ P F  ++ + +D  LV  +  N     H ELE  G    S    E
Sbjct: 1   MTQPSFATHDVFNQSPPFEEVDLFGTDRPLVEAVTFNNGGHAHVELEAFGRNWGSAHMAE 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN  TP+L  +   G R D+VEFHPA+H L+  S H G+H S WD + +P     A
Sbjct: 61  RGRLANEQTPKLKTFDAKGLRRDQVEFHPAYHELMSESFHAGIHNSTWDHNGQPAGGS-A 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAA+ Y+ AQ+E GHL   ++T AS+ AL   P +     P + S+ YDP      +
Sbjct: 120 EVVRAAKFYMAAQVETGHLCPVTMTRASVAALAAQPELLAQIMPVLSSKRYDPAFAPWSE 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  +++G+G+TEK+GGTD+ +  ++  +  D    + GHKWF+S+PM DAF++LAQ E  
Sbjct: 180 KRGMSVGMGMTEKQGGTDVRSNATRAIRDGDAYRII-GHKWFMSAPMCDAFLVLAQAEEG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LSCFFMPRFKPDGSINDIQFQRLKDKLGNRSNASSEVEFTGAYAVPVGEPGRGIRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR  LA A+H+AR R V    LID  +M+  +AD+AL + A+ AL
Sbjct: 299 VQLTRQDCAIASAGLMRSGLAHALHHARHRSVFQKHLIDHSLMQSVLADMALQVEASVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FD+A     EAAY R+M P  KYW CK AP  + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDQAPHDHLEAAYMRLMTPAVKYWVCKSAPPFLYEAMECMGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSI 491
           HYRE+P N+I  GSGN M LDVL  + + ++   ++  +L QD  G +G      L    
Sbjct: 419 HYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQSLIQDTAGLTGGPAAASLVARA 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
            L  +++  AR   E +A  ++A+AL        A++F   R      + +       + 
Sbjct: 479 FLQADNERTARLAVETLAKLAAASALSEI-HPPHAELFARTRLTPEPATMYGAADLSADQ 537

Query: 552 AH 553
           A 
Sbjct: 538 AQ 539


>gi|222109323|ref|YP_002551587.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728767|gb|ACM31587.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 551

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/551 (32%), Positives = 277/551 (50%), Gaps = 18/551 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P     +  ++D+ L   +           L+     +       LA  AN 
Sbjct: 5   THQVFNQYPELNDYHPLATDAALCEAVERAGADWARPALDTYAARLGMAETYALAEQANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TPQL  +   G R D +EFHPAWH L+     +GL    +        R       AA 
Sbjct: 65  HTPQLQRFDTRGRRIDALEFHPAWHQLMALYRGEGLISRPFQDE-----RPGRWAAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T A++  L   P + +    +++S  YDP +     K S+ +G
Sbjct: 120 FYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTVYDPRDLPVADKASIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           +G+TEK+GG+D+ A T+    I      G Y L GHKWF S+P  DA +++A+    G  
Sbjct: 180 MGMTEKQGGSDVRANTTVAAPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVARTGEGGPF 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 240 ACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGIPTIIEMA 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R +  +AIHYA RRH  G  L +QP+M+  +AD+AL+  AA  L+
Sbjct: 300 SYTRLNCVVGSAAILRQATVQAIHYAHRRHAFGKALAEQPLMRAVLADLALESEAALHLA 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA ++++      + A+ R+M P  K+W CK A  +  EAME +GG+GY+E+  +AR 
Sbjct: 360 MRLAQAYED-DDAPAQRAWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVEDGVMARL 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           +RE+P NSI  GSGN M LDVL  L++       L + L        +       L+  +
Sbjct: 419 FREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAARELQALL 478

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTHCMLHGR- 548
           +   E  +GL R LT+++ L + A  L +     +AD F+  R  D         +  R 
Sbjct: 479 ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADSGAGRVAGAIDTRG 538

Query: 549 FNAAHIIDSLY 559
            + A ++   +
Sbjct: 539 LDVAAVLARAF 549


>gi|163856266|ref|YP_001630564.1| putative acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259994|emb|CAP42295.1| putative acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 555

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 188/556 (33%), Positives = 275/556 (49%), Gaps = 21/556 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           P  +   +NQ       + Y +D  L  A++    +    EL   G ++        A  
Sbjct: 3   PFQTHTVVNQVAPLEDYSLYDTDPALNQAVLREGAADAVAELREHGAWLGRGHVLAAAEQ 62

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN  +P+ H Y   G R D++EFH AWHALL   +  GLH   W R         A   R
Sbjct: 63  ANRCSPRWHGYDRNGHRVDQIEFHAAWHALLAGIVSRGLHSHAWLRPA-----PGAQVAR 117

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPMQ 192
           AA   +  Q+EAG L   ++T A++  L   P       + W P + SR+YD  +     
Sbjct: 118 AAAYLMQGQIEAGTLCPTTMTYAAVPLLQAEPAGVIDFGRQWLPALASRDYDSADAPLAA 177

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQ 248
           K    IG+GLTEK+GG+D+ AI ++ + +  G     Y L+GHKWFLS P +DA ++LA 
Sbjct: 178 KRGALIGMGLTEKQGGSDLRAIATRAEPVGQGGRGAAYLLTGHKWFLSVPHADAHLVLAN 237

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   GCF VPR   DG  N +  +RLK+K+GNRSNA+ E+EF   +G L+G+       
Sbjct: 238 TDAGPGCFFVPRWTPDGPRNAVRIRRLKDKLGNRSNASGEVEFEQAWGMLMGEPGRGLPL 297

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M     LD  + S + +R ++ +A H+A+ R   G  L  QP+M++ +AD+AL+  A
Sbjct: 298 LLQMAATTRLDCVLGSAALLRQAVVQAAHHAQHRQAFGRALASQPLMRQVLADLALESEA 357

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A + RLA + DE + +    A  R+  P  K W CK A A IAE ME  GG+GY+EE 
Sbjct: 358 AMAWALRLARAVDE-RHQPAARALVRVGTPAAKLWVCKRAIAAIAECMEVWGGNGYVEES 416

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-----SGKKV 483
            + R YRE+P NSI  GSG+ M LDVL  L++  +  + L   L+   G+        + 
Sbjct: 417 PLPRLYREAPVNSIWEGSGSIMALDVLRALQRDPDCLQALHDELDPARGAWPAYDQAWQA 476

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
              L    +  + D   AR L   +A    AA L R     +AD F+ +R  D       
Sbjct: 477 WRELAARQAGSEADPAQARRLAAGLARLWQAALLIRHAPAAVADAFVASRLADAGGIA-G 535

Query: 544 MLHGRFNAAHIIDSLY 559
            L    +   I+   +
Sbjct: 536 ELPTGADLDAILARAW 551


>gi|172059183|ref|YP_001806835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171991700|gb|ACB62619.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 550

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 180/549 (32%), Positives = 279/549 (50%), Gaps = 17/549 (3%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYN 80
               NQ    +  N +++D  L   +A   +      L+  G  + S     LA  AN +
Sbjct: 6   HAVTNQFDELVDYNLFATDIALRDALARAGANWAVPRLDAYGARLGSADTARLADEANRH 65

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+L+A+   G R D+V+FHPAWH LL    ++G     +  +     R       AA  
Sbjct: 66  TPELNAFDRRGRRIDRVDFHPAWHTLLGLYRNEGFVSLPFRDT-----RPGRWAASAAGF 120

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G+
Sbjct: 121 YLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGM 180

Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255
           G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ E G   C
Sbjct: 181 GMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSC 240

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M   
Sbjct: 241 FYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATY 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ R
Sbjct: 301 TRLSCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMR 360

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +R
Sbjct: 361 LADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFR 419

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISL 493
           E+P NSI  GSGN M LDVL  + +  +    L + L          +  +  LR  ++ 
Sbjct: 420 EAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAELADLGAGEPRIRAALDALRAMLAA 479

Query: 494 CKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCMLHGRFN 550
             +  +   R   +++AL + A  L R     +AD F+  R    +             +
Sbjct: 480 PADTLEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAID 539

Query: 551 AAHIIDSLY 559
            A ++   Y
Sbjct: 540 VAALLQRAY 548


>gi|84496268|ref|ZP_00995122.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84383036|gb|EAP98917.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 547

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/554 (35%), Positives = 288/554 (51%), Gaps = 23/554 (4%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFP-SVVHKELELLGEYVLSCTAQELARMAN 78
            +   +NQ P F+G N +SSD + V  +  +  +    EL  LG    +   Q  A  A+
Sbjct: 2   HTHDVVNQVPAFVGHNLFSSDEVAVEAMHRWGRAEDVAELTALGSLAGAAQTQAWADDAH 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            NTP+L  +   G R D+V +  ++H L+R ++  GL    W R  +      AH  RAA
Sbjct: 62  RNTPRLVTHDRVGHRIDEVAYDRSYHDLMRTAVGHGLTAEAWTRPADT----GAHLRRAA 117

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
                ++ EAGHL   S+T A+  AL  +P +   W P + SR+YDP  K    + S   
Sbjct: 118 GFVTWSRAEAGHLCPISMTYAAAPALRVSPALADRWLPLLASRDYDPELKPFSDRRSAIA 177

Query: 199 GLGLTEKRGGTDIAAITSQGQK------ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           G+G+TEK+GG+D+ A  +Q              Y L+GHKWF S+PMSD F++LA  E  
Sbjct: 178 GMGMTEKQGGSDVRANVTQAVATPGGPIDGGDTYRLTGHKWFFSAPMSDVFLVLATTESG 237

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           V CFLVPR+L+DG+ N L  QRLK+K+GNRSNA+ E+EF   +   +G        + +M
Sbjct: 238 VTCFLVPRVLDDGTRNALRLQRLKDKLGNRSNASSEVEFEGAWAVRVGGDGRGIRTIIEM 297

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  + S + MR +   A+H+AR R   G  LI+QP+M+  +AD+A++  AA  L
Sbjct: 298 VSSTRLDCILGSSATMRQATVRAVHHARHRSAFGARLIEQPLMRNVLADLAIEAEAAELL 357

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            FRLA++ D       E+  AR+   + K+W CK  P ++ EA+EC+GG+GY+EE  +AR
Sbjct: 358 GFRLAHAVDAG-----ESELARLGVALGKFWVCKRTPHLVGEALECLGGAGYVEENGLAR 412

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
            YRE+P NSI  GSGN   LDVL  + +       L   L    G   +    I  +   
Sbjct: 413 LYREAPLNSIWEGSGNVGALDVLRAMTREPASVAALDKELSLARGHDRRLDLAIDAVPAL 472

Query: 491 ISLCKED--KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC-HSTHCMLH- 546
           ++    D     AR + E +A+   AA L +   + +AD F+ +R  +    +T   L  
Sbjct: 473 VAAAGSDSGAWQARGIVEHLAVTFQAALLVQHSPHAVADTFIASRLAEGGPAATFGTLGV 532

Query: 547 -GRFNAAHIIDSLY 559
            G      I+D  +
Sbjct: 533 VGAAEVTQILDRAW 546


>gi|83720392|ref|YP_443790.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83654217|gb|ABC38280.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 546

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 185/551 (33%), Positives = 281/551 (50%), Gaps = 21/551 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +    + A  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    +++ F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHIIDSLY 559
            + A ++   Y
Sbjct: 534 VDVAALLQRAY 544


>gi|213648985|ref|ZP_03379038.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 529

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 175/486 (36%), Positives = 266/486 (54%), Gaps = 7/486 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P NSI  GSGN M LDVL +L K   +++ L     +  G        + +    L K D
Sbjct: 419 PVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPD 478

Query: 498 KGLARF 503
           +   + 
Sbjct: 479 EANGQR 484


>gi|92117804|ref|YP_577533.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91800698|gb|ABE63073.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 547

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 207/548 (37%), Positives = 300/548 (54%), Gaps = 7/548 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQE 72
           + QP+  +    NQ P    ++ ++ D+ L  A+ AN       EL   G +  S     
Sbjct: 1   MTQPAFKTHEVFNQSPPLEDVDLFALDAPLAEAVAANGGKAASGELSEFGRHWGSAAMAS 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN N P+L  +   G R D+VEFHPA+H L+  S H GLH S W    +P     A
Sbjct: 61  RGRLANENPPKLRLFDACGNRRDEVEFHPAYHELMAHSAHAGLHNSTWTADGKP-AGGAA 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAAR Y+ AQ+E GHL   ++T AS+ AL T P+V     P I +R YDP+      
Sbjct: 120 EVVRAARFYMAAQVETGHLCPITMTRASVAALATGPQVLAKAMPLIATRSYDPSFAPWST 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + +G+G+TEK+GGTD+ A  ++ ++   G Y ++GHKWF+S+PM DAF++LAQ +G 
Sbjct: 180 KRGMTLGMGMTEKQGGTDVRANQTRAERDG-GAYRITGHKWFMSAPMCDAFLVLAQADGG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LTCFFMPRFQPDGSVNEIHFQRLKDKLGNRSNASSEVEFTGAYAERVGEEGKGIRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI SV  MR  LA A+H+ R R V    L DQP+M+  +AD+AL + A+ AL
Sbjct: 299 VQLTRQDCAIASVGLMRSGLAHALHHTRYRSVFQKHLADQPLMQAVLADMALHVEASVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FDEA + ++ AA+ R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +AR
Sbjct: 359 VMRLCRAFDEASTDAKAAAWMRLLTPAVKYWTCKSAPGFLYEAMECLGGNGYVEESILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSI 491
           HYRE+P N+I  GSGN M LDVL  L         +   L  D  G  G           
Sbjct: 419 HYREAPVNAIWEGSGNVMCLDVLRALAHEAEAAVAVLEDLVADTRGLPGAAESVAFLART 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF-N 550
               + + +AR   E +A  ++AAAL R   +  A +F   R        +        +
Sbjct: 479 FRRPDGEHVARQAVETLAQLAAAAALNRTAPDQAA-LFAATRLGGTHGRMYGTAELSLDD 537

Query: 551 AAHIIDSL 558
           +  +++  
Sbjct: 538 SRRLLERA 545


>gi|167582818|ref|ZP_02375692.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 539

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 184/546 (33%), Positives = 279/546 (51%), Gaps = 21/546 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +    + A  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELRALGGHDARIRAELDALRALL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN-CHSTHCMLHG-R 548
               +  + L R L ++IAL + A  L  A    +++ F+  RF +         L   R
Sbjct: 474 GTPPDALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARR 533

Query: 549 FNAAHI 554
            + A +
Sbjct: 534 VDVAAL 539


>gi|85712061|ref|ZP_01043114.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85694051|gb|EAQ31996.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 539

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 184/538 (34%), Positives = 275/538 (51%), Gaps = 16/538 (2%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE-LLGEYVLSCTAQELARMANYNT 81
            ALNQPP  I  N Y SD  L      F     ++    LG  + S    E    AN+  
Sbjct: 1   MALNQPPYLINYNVYQSDRFLQQCAQYFAESNEQDERVKLGSLLGSAQHIERCYAANHYP 60

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  +   GER + + +H ++H L++ +    LH  +W       V   +H  R  R Y
Sbjct: 61  PELFTHDRYGERINHIAYHASYHELMQIAAEQQLHNGVWR-----SVSPYSHVERTIRYY 115

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L +QLEAGH    ++T A++  +  +P   +    ++    YD  +    +K+++ +G+G
Sbjct: 116 LNSQLEAGHGCPITMTFAAIPVIQQSPLYPQL-QEQLLQPLYDGRDIPFYEKSALTVGMG 174

Query: 202 LTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +TEK+GG+D+ + T+            +Y L+GHKWFLS+PMSD F+MLAQ +  +GCF 
Sbjct: 175 MTEKQGGSDVRSNTTHATPQGATGEGEVYLLNGHKWFLSAPMSDLFLMLAQTKHGLGCFS 234

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR  EDG+ NG+  Q+LK K+GN+SNA+ E+E ++  G LLG        + DM  +  
Sbjct: 235 VPRWREDGTRNGIHIQQLKQKMGNQSNASCEVELNDVEGRLLGSEGKGVRTIIDMVAMTR 294

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D  I S + +R SL +A+H+   R   G  LI+QP+M   + D+A++   A   +  +A
Sbjct: 295 FDCMIGSSALLRQSLVQALHHCHYRSAFGARLIEQPLMINLLCDMAMESECALLWTLTVA 354

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D   S  E    AR++ P+ KYW CK AP V  EAME IGG G +E   + R YRE+
Sbjct: 355 QWLDS--SDIEAKRLARLLVPVGKYWICKRAPQVTYEAMEVIGGMGVMENTPMPRLYREA 412

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495
           P N+I  GSGN   LDVL   EK   L    FS + +  G   +   V+  L+  +    
Sbjct: 413 PINAIWEGSGNIQCLDVLRACEKDPELLSTWFSFIARSCGQYSRYDAVVERLQQELEKYP 472

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
                AR L ++IAL + AA   +    + + +  EN  L+        L G F+ AH
Sbjct: 473 PSPFNARRLVDEIALLTQAALAIQHMQPERSRLICEN-LLNRSGRNLGTLVGDFDTAH 529


>gi|134294247|ref|YP_001117982.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134137404|gb|ABO53147.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 550

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 182/550 (33%), Positives = 284/550 (51%), Gaps = 17/550 (3%)

Query: 21  SLFALNQPPLFIGMNAY-SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ    +  N + +  +L  AL          +L+  G  + S     LA  AN 
Sbjct: 5   THAVTNQFDELVDYNLFATDAALRDALARAGAGWAAPQLDAYGARLGSADTARLADEANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L+A+   G R D+VEFHPAWH LL    ++GL    +  +     R+      AA 
Sbjct: 65  HTPELNAFDRRGRRIDRVEFHPAWHTLLGMYRNEGLVSLAFRDT-----RRGRWAATAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+EAG L   ++T A++  L   P +      K++S +YDP +     K S+  G
Sbjct: 120 FYLHGQIEAGTLCPATMTQAAIPLLQKEPALWALLRDKLYSDDYDPRDVPLAGKRSIWFG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           +G+TEK+GG+D+ A T+           G Y L GHKWF S+PM DA +++A+ E G   
Sbjct: 180 MGMTEKQGGSDVRANTTLATASGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPS 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD       + +M  
Sbjct: 240 CFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMAT 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA  L+ 
Sbjct: 300 YTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A++F E      E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  IAR +
Sbjct: 360 RIADAF-ELDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLF 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           RE+P NSI  GSGN M LDVL  + +  +    L + L +        +  + +LR  ++
Sbjct: 419 REAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAELTELGAGEPRIRAALDVLRAMLA 478

Query: 493 LCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHS-THCMLHGRF 549
              +  +  AR   +++AL + A  L R     +AD F+  R    +             
Sbjct: 479 APADALEASARLFAQRLALVAQACLLTRDAPAAVADAFIATRLAAPDWGRVAGGFDPRAM 538

Query: 550 NAAHIIDSLY 559
           + A +++  Y
Sbjct: 539 DVAALLERTY 548


>gi|304396946|ref|ZP_07378826.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB]
 gi|304355742|gb|EFM20109.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB]
          Length = 542

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 184/545 (33%), Positives = 275/545 (50%), Gaps = 15/545 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD+ L   ++   +   +E L  +G  + S  + EL R+AN 
Sbjct: 5   THTVFNQPHPLSNSNLFLSDTPLGEALSREGAGWDREWLASVGRQLGSAESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  Y   GER D+V FHPAWH L++      LH   W    +P VR+QA   RAAR
Sbjct: 65  EPPELLRYDARGERMDEVRFHPAWHLLMQGVCASRLHNLSW----QPTVREQASVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T A++  L T  P   + W   + S  YD   +   QK  + I
Sbjct: 121 FILHAQVEAGTLCPVTMTHAAIPLLQTYLPAAFEGWLDPLLSDRYDTHAQPGDQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+   T+  + +        Y L+GHKWF S P SDA ++LAQ    + 
Sbjct: 181 GMGMTEKQGGSDLLTSTTHAEPLGARGAGEAYRLTGHKWFFSVPQSDAHLVLAQTPAGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL DGS N +  +RLK+K+GNRSNA+ E+EF +  G+LLG+       +  M  
Sbjct: 241 CFFLPRLLPDGSRNAIQLERLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMGG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   D A+ S   MR + + A+ +A +R V G  L++QP+M++ +A  AL +   TAL  
Sbjct: 301 MTRFDCALGSHGQMRRAFSVAVSHAHQRQVMGKNLVEQPLMRQVLAQQALQLEGQTALLM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++ +  ++  E  +AR+  P  KY  CK     +AE+ME +GG GY E   + R Y
Sbjct: 361 RLARAWSQP-AKPHEVTFARLFTPAAKYEICKAGAPFVAESMEVLGGIGYCEASELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R+ P NSI  GSGN M LDVL +  +   +   L    E   GS+        +  + L 
Sbjct: 420 RDMPVNSIWEGSGNVMCLDVLRVFARQAEVTAMLSQEFEAVKGSNRHFDTRWRQLRLRLN 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
              +  AR +T  + L +  A L +     +AD + +                      +
Sbjct: 480 HVPEEQAREVTRTLLLLAMGAQLLKYAEPPLADAWCQQWLDQRGSRPLEAAITD----RL 535

Query: 555 IDSLY 559
           +D   
Sbjct: 536 LDRAC 540


>gi|332531004|ref|ZP_08406926.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
 gi|332039565|gb|EGI75969.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
          Length = 554

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 202/563 (35%), Positives = 303/563 (53%), Gaps = 31/563 (5%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQEL 73
           +HQ   +    NQP   + +N +  +  +   +  + P +  K LE LG+   S T Q  
Sbjct: 1   MHQ---THDVFNQPAPLVDVNLFEGNLAMRDALKVHAPGLDLKPLEALGQLAGSATLQVH 57

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           AR+AN + PQL  +   G R D+VEFHP++H L+  ++  GLH S W  +      + AH
Sbjct: 58  ARLANAHGPQLRTHDRQGYRIDEVEFHPSYHILMAAAMKAGLHGSPWLDNT-----RNAH 112

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +RAA   L  +LE   L   S+T A   AL     +H++W+P + +R YDP       K
Sbjct: 113 VLRAACFMLFTELEPSMLCPISMTYAVTPALRANAAIHQEWSPGLGARAYDPALTLYKHK 172

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGI---YCLSGHKWFLSSPMSDAFIMLAQV 249
             + +G+G+TEK+GG+D+ A T++ +    D     Y L+GHKWF S+PMSDAF++LAQ 
Sbjct: 173 AGLTMGMGMTEKQGGSDVRANTTRAEPDGHDAWGARYRLTGHKWFFSAPMSDAFLVLAQT 232

Query: 250 EGRVGCFLVPRLLED--------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
              + CF +PR+L +        G  N L  QRLK+K+GN++NA+ E+EF     +L+G+
Sbjct: 233 ANGLSCFFLPRVLPEALSGSSTQGQHNALRIQRLKDKLGNKANASSEVEFEGALAWLVGE 292

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M  +  LD A+ S   MR +L +A+H+ R+R   G  LI+QP+MK  +AD
Sbjct: 293 EGRGIPQILEMGTMTRLDCALGSSGLMRQALTQALHHTRQRLAFGKTLIEQPLMKNVLAD 352

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL+  AATAL+ RLA +FD+      E A AR++ P+ K+W CK       EAMEC+GG
Sbjct: 353 LALESEAATALALRLARTFDQP-DDPHEKAMARLLTPVAKFWICKRGAGFAQEAMECLGG 411

Query: 422 SGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +GY+EE     +AR YRE P NSI  G+GN M LD+L  L K  +    L   L+  LG 
Sbjct: 412 NGYVEEGGEGVLARIYREMPVNSIWEGAGNIMALDLLRGLRK-ADAASALAQELKPALGQ 470

Query: 479 SGKKVITILRDSISLCKE---DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
                +  +  S+ L  E    +  AR L + +ALA  AA L ++  + +   F E+R  
Sbjct: 471 --HAALDRMARSLPLRVEVMGSEVEARRLAQDVALAVQAALLAQSAPSFVFSAFCESRLG 528

Query: 536 DNCHSTHCMLHGRFNAAHIIDSL 558
                T+  L    +   I+   
Sbjct: 529 GAWGQTYGSLGSGVDFDAILRRA 551


>gi|317493578|ref|ZP_07951999.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918521|gb|EFV39859.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 544

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 178/520 (34%), Positives = 261/520 (50%), Gaps = 11/520 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N Y SD+ L  A++          L  +G  + S  + EL RMAN
Sbjct: 4   QTHTVFNQPNPLSNSNLYLSDTPLQEAVVREQAGWDSALLSAVGLQLGSAESLELGRMAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G R D+V FHP+WH L++    + +H   W  +        +   RAA
Sbjct: 64  ANPPELLRYDAAGRRVDEVRFHPSWHMLMQGLTENRVHNLPWQNN----AVSGSFAARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L +Q+EAG L   ++T  ++  L    P     W   + S  YDP +    QK  + 
Sbjct: 120 RFLLHSQIEAGTLCPITMTFGAIPLLQKCLPTSMNGWLMGLASNRYDPHSLPAEQKKGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQG---QKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+   T+Q    +    G  Y + GHKWF S P SDA ++LAQ  G +
Sbjct: 180 IGMGMTEKQGGSDVLTNTTQAIALEGQGSGKPYRIVGHKWFFSVPQSDAHLILAQASGGI 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR+L DG+ N +  +RLK K+GNRSNA+ E+EF +  G+LLGD       +  M 
Sbjct: 240 SCFFVPRILPDGTRNAIRIERLKEKLGNRSNASAEVEFQDATGWLLGDEGDGVRLILQMG 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR +   A ++A +R   G  L +QP+M++  A + L +   T+L 
Sbjct: 300 SATRFDCALGSHGLMRRAFTVAFYHALQRQAFGKSLAEQPLMRQVFAKMTLRLEGQTSLL 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           FRL  S +    +  E  + R+M P  K+  CK     +AEAME +GG GY EE  + R 
Sbjct: 360 FRLCRSLEMPDVQG-ERLFGRLMTPAAKFAVCKQGIPFVAEAMEALGGIGYCEESELPRL 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           YRE P NSI  GSGN M LDVL +  K  ++ E L   L    G +             L
Sbjct: 419 YREIPVNSIWEGSGNIMCLDVLRVWRKNPHMEEMLSLELADVKGQNVLLDKAWRNLLKRL 478

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
               +  AR +++++   ++AA L R    ++A+ + +  
Sbjct: 479 HNPSEAEARIISDELFNINAAAQLLRFAPTEVAEAWCQQY 518


>gi|73539910|ref|YP_294430.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72117323|gb|AAZ59586.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 553

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 172/539 (31%), Positives = 275/539 (51%), Gaps = 16/539 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMA 77
           + +    NQ P     N +  D ++   +       H  +L   G  +           A
Sbjct: 4   AATHRVFNQVPDLAHYNLFGCDPIVGDALERLGGGWHAADLMAYGARLGEPEVLAWGADA 63

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+LH Y   GER D+V FHP+WHALL       L    +        R  A   R 
Sbjct: 64  NRYAPELHTYSRTGERVDQVTFHPSWHALLSLLRSQQLQAMPFAEP-----RAGAWIART 118

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQ+E+G L   ++T AS+  L     +  D  P+++++ +D  +     KT++ 
Sbjct: 119 AGYFLQAQVESGSLCPITMTFASIPVLRKETALFADLEPRLYAKNHDARDLPWRDKTAIM 178

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV---E 250
           IG+G+TEK+GG+D+ A T+    +        Y L+GHKWF S+PM DA +++A++   +
Sbjct: 179 IGMGMTEKQGGSDVRANTTVAHPVRGEGRGAEYLLTGHKWFFSAPMCDAHLVVARMGAED 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF VPR  +DGS N +  QRLK+K+GNRSN++ E+EF    G L+G+       + 
Sbjct: 239 GPLSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNSSSEVEFREASGILIGEEGRGIPTII 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     LD  I S + +R +  +A+H+ R R   G +L DQP+M+  +AD+AL+  AAT
Sbjct: 299 EMATSTRLDCVIGSAAILRAAYVQALHHTRHRAAFGSLLADQPLMRNVLADLALESEAAT 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L   LA++F+ A++    AA+ R++ P  K+W CK       EAME  GG+GY+E+  +
Sbjct: 359 LLMMELAHAFEHAETDPLAAAWKRVVTPAAKFWICKRTIEATGEAMEVWGGNGYVEDGPM 418

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILR 488
           AR YRE+P NSI  GSGN M LDVL  +++  +   +L   L +   +  + +  +  L+
Sbjct: 419 ARLYREAPVNSIWEGSGNIMCLDVLRAIQRTPDDAARLLHDLSRRAAAHPAVRAELASLQ 478

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
             +    E  +  AR   + + L + +A +      + A+ F+ +R           L 
Sbjct: 479 AMLREPAEQLEAHARRFAQGLVLTAQSALMLAHADAENAEAFVASRLGRQHGRVFGTLD 537


>gi|284044149|ref|YP_003394489.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283948370|gb|ADB51114.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 545

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 177/564 (31%), Positives = 265/564 (46%), Gaps = 41/564 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTA 70
           M  +     +   LNQ P  + ++ +S+D+ L   +     +        +G  V S  A
Sbjct: 1   MATIDHSGATHAVLNQAPPLLPLDLFSTDAPLREALEREGGAWGVDRAREVGTIVGSVEA 60

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            E  R A  N P+L  +   G R D VE  P+WH LLR +I   +H   W        R 
Sbjct: 61  HEHGRRAERNEPRLMTHDRYGNRIDAVELDPSWHWLLRGAIEREIHALPWREQ-----RD 115

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            AH +RAA + L      G L   S+T A++ AL       +D AP+I   E++P    P
Sbjct: 116 GAHAVRAALMMLWGNANGGVLCPVSMTYAAIPAL-------RDGAPEIAV-EWEPRLTLP 167

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
             +     G+ +TEK+GG+D+ A  ++ +   DG Y L GHKWF S P  D F++LAQ  
Sbjct: 168 DYERGALAGMAMTEKQGGSDVRANITRAEPAGDGEYELWGHKWFCSYPPCDVFLVLAQAP 227

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G + CF V R        G+ +QRLK+K+G RS  + E+EF      L+G+       + 
Sbjct: 228 GGLSCFFVERG------PGMEFQRLKDKLGTRSLPSSEVEFRGLRARLVGEEGRGVPAII 281

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M     LD  + S + MR  + EA H+AR R   G  L+DQP M+  +AD+A++  AAT
Sbjct: 282 RMVNHTRLDCLLGSATAMRRGVVEAFHHARHRSAFGAKLVDQPAMRNVLADLAIESEAAT 341

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A + R+A SFDE     ++  + R    + KYW CK APA  +EA+EC+GG+G++E+  +
Sbjct: 342 AAALRVARSFDE-----DDVPFRRFATAVMKYWVCKRAPAHASEALECLGGNGFVEDSGM 396

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITIL 487
              YR++P  SI  GSGN   LDVL  L K       L +      G   +    +  + 
Sbjct: 397 PLLYRDAPLMSIWEGSGNVAALDVLRALVKEPEGLPALLAECHLADGGDARLDAHLARVE 456

Query: 488 RDSISLCK-------------EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           RD   L               + +  AR + E +  A  A+ L R     +AD F   R 
Sbjct: 457 RDVAGLLGDAGAAADPAAALADAQFRARRIVEDLGTALQASLLVRNAPVAVADAFCAGRL 516

Query: 535 LDNCHSTHCMLHGRFNAAHIIDSL 558
             +    +  L    +   I++ +
Sbjct: 517 GGDRGRVYGTLPSGVDTEGILERV 540


>gi|91977493|ref|YP_570152.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683949|gb|ABE40251.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 551

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 201/543 (37%), Positives = 299/543 (55%), Gaps = 5/543 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTA 70
           M        +    NQ P F  ++ + +D  LV  +A N  S  H ELE  G    S   
Sbjct: 1   MVMTESVFATHEVFNQSPPFEDVDLFGADRPLVEAVALNQGSYAHVELEAFGRNWGSAHM 60

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            +  R+AN ++P+L ++   G+R D+VEFHPA+H L+  S H G+H S WD    P    
Sbjct: 61  ADRGRLANEHSPRLKSFDAKGQRRDQVEFHPAYHELMSESFHAGIHNSTWDGRGRPAGGS 120

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A  +RAA+ Y+ AQ+E GHL   ++T AS+ A+   P +     P + ++ YD      
Sbjct: 121 -AEVVRAAKFYMAAQVETGHLCPVTMTRASVAAIAAQPDLLAQVMPVLGTKRYDSAFAPW 179

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            +K  ++IG+G+TEK+GGTD+ +  ++  +  +    + GHKWF+S+PM DAF++LAQ +
Sbjct: 180 SEKRGMSIGMGMTEKQGGTDVRSNATRAIRDGEAYRII-GHKWFMSAPMCDAFLVLAQAD 238

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       + 
Sbjct: 239 EGLSCFFMPRFKPDGSVNDIQFQRLKDKLGNRSNASSEVEFAGAYAVPVGEPGRGIRTII 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D AI S   MR  LA A+H+AR R V    LID  +M+  +AD+AL + A  
Sbjct: 299 QMVQLTRQDCAIASAGLMRSGLAHALHHARHRSVFQKHLIDHSLMRSVLADMALQVEATV 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL  RL  +FD+A     EAAY R+M P  KYW CK AP ++ EAMEC+GG+GY+E+  +
Sbjct: 359 ALVMRLCRAFDQAPHDHLEAAYMRLMTPAVKYWVCKSAPPLVYEAMECLGGNGYVEDGIL 418

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRD 489
           ARHYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD  G +G      L  
Sbjct: 419 ARHYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQGLIQDTAGLTGGPAAASLVA 478

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
              L  +++  AR   E +A  ++AAAL        A++F   R      + +       
Sbjct: 479 RAFLQADNERTARLAVETLAKLAAAAALNEV-HPPHAELFARTRLAPEPATMYGAADLSA 537

Query: 550 NAA 552
           + A
Sbjct: 538 DQA 540


>gi|90423755|ref|YP_532125.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90105769|gb|ABD87806.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 549

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 203/528 (38%), Positives = 296/528 (56%), Gaps = 5/528 (0%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANY 79
           +    NQ P F  ++ ++ D  L   +A +       EL   G    S    E  R+AN 
Sbjct: 8   THEVWNQSPPFEDVDLFALDRPLADAVAAYGGASAAAELSEFGREWGSAEMAERGRLANE 67

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           NTP+L ++   G R D+VEFHPA+H ++  S+  GLH S WD   +P     A  IRAA+
Sbjct: 68  NTPKLKSFDARGLRRDEVEFHPAYHEVMAASMRAGLHNSTWDAQGKP-AGGAAEVIRAAK 126

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            Y+ A +E+GHL   ++T A++ AL   P + +   P I +R YD + K   QK  + +G
Sbjct: 127 FYMAAPVESGHLCPITMTRAAVGALSAQPDLLQQLMPVIATRSYDASFKPWQQKRGMTLG 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GGTD+ + +++  +  D    + GHKWF+S+PMSDAF++LAQ EG + CF  P
Sbjct: 187 MGMTEKQGGTDVRSNSTRAVRDGDAYRLI-GHKWFMSAPMSDAFLVLAQAEGGLTCFFTP 245

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DGS N L +QRLK+K+GNRSNA+ E+EF+  +   +G        + +M  L   D
Sbjct: 246 RFAPDGSVNALQFQRLKDKLGNRSNASSEVEFTGAYAQRVGGEGRGIRTIIEMVQLTRQD 305

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AI SV  MR  LA+A+H+AR R V    L DQP+M+  +AD+AL + A+ AL  RL  +
Sbjct: 306 CAISSVGFMRAGLAQALHHARHRSVFQKRLADQPLMQAVLADMALQVEASVALVMRLCAA 365

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD A S    AA+ R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +AR YRE+P 
Sbjct: 366 FDRAGSDEVAAAWMRLLTPAVKYWICKSAPPFLYEAMECLGGNGYVEEGVLARLYREAPV 425

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSGKKVITILRDSISLCKEDK 498
           N+I  GSGN M LDVL  L +  +L   +   L  +  G  G      L        + +
Sbjct: 426 NAIWEGSGNVMCLDVLRALSREPDLAAAVLQNLVAETKGLPGAAEAAALVGKTFQRPDSE 485

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
            +AR   E +A  ++AAAL      + A++F   R + +    +  + 
Sbjct: 486 RVARLSVETLAKLAAAAALNGV-HPEHAELFAATRLVPSLGDMYGAID 532


>gi|317049747|ref|YP_004117395.1| acyl-CoA dehydrogenase domain-containing protein [Pantoea sp.
           At-9b]
 gi|316951364|gb|ADU70839.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. At-9b]
          Length = 542

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 187/517 (36%), Positives = 274/517 (52%), Gaps = 11/517 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N ++ D  L   +A   +   +E L  +G  + S  + EL R+AN 
Sbjct: 5   THNVFNQPQPLSNSNLFTRDLPLCEAVAREGASWDREWLASVGLQLGSAESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  Y   GER D+V FHPAWH L++      LH   W    +P V+  A   RAAR
Sbjct: 65  QPPELLRYDARGERLDEVRFHPAWHLLMQGLCASRLHNLSW----QPDVQPNAMVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+EAG L   ++T A++  L    P  + DW   + S  YD  ++    K  + I
Sbjct: 121 FMLHAQVEAGSLCPVTMTHAAIPLLQNYLPAPYLDWRDALLSDRYDAHHQPGSNKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GGTD+ + +++ + +        Y + GHKWF S P SDA ++LAQ  G + 
Sbjct: 181 GMGMTEKQGGTDVLSNSTRAEPLGGRGPGEAYRIVGHKWFFSVPQSDAHLILAQTAGGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL DG+ N +  +RLK+K+GNRSNA+ E+EF +  G+L+GD       +  M  
Sbjct: 241 CFFLPRLLPDGARNAIRLERLKDKLGNRSNASCEVEFQDAIGWLMGDEGDGIRLILKMGG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   D A+ S   MR + + A+H+A++R V G  L DQP+M+  +A  AL +   TAL  
Sbjct: 301 MTRFDCALGSHGLMRRAFSIALHHAQQRQVMGKNLSDQPLMRTVLAQQALQLEGQTALLL 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++    S   E  YAR+  P  KY  C+     +AEAME +GG GY EE  + R Y
Sbjct: 361 RLARAWSTPVSEH-ERLYARLFTPAAKYVICQAGIPFVAEAMEVLGGIGYCEESELPRLY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDVL +L + ++    L   LE   G +        +  + L 
Sbjct: 420 REMPVNSIWEGSGNVMCLDVLRVLNRQSDALVMLSDELEAVKGCNRHFDRRWRQLRLRLG 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
              +G AR +T ++   ++AA L       +AD + +
Sbjct: 480 NVPEGQARAVTTELLQLATAAILLNVAEPPLADGWCQ 516


>gi|262045386|ref|ZP_06018410.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037304|gb|EEW38551.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 528

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 179/491 (36%), Positives = 264/491 (53%), Gaps = 11/491 (2%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H    +    NQP      N + SD+ L  A++          L  +G+ + +  + 
Sbjct: 4   DTMHWQ--THTVFNQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W        R+ 
Sbjct: 62  ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
           A   RAAR  L AQ+EAG L   ++T A+   L    P   +DW   + S  YDP     
Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
            QK  + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ  
Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             + CF VPRLL DG  NG+  +RLK K+GNRSNA+ E+EF    G+L+GD       + 
Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  L   D A+ S + MR + + A+++A +R   G  L++QP+M++ +  +AL +   T
Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FRLA ++D  +  + E+ +AR+  P  K+  CK     +AEAME +GG GY EE  +
Sbjct: 358 AFLFRLARAWDH-RDDARESVWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
            R YRE P NSI  GSGN M LDV+ +L K     E L +   +  G +    +    L+
Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQ 476

Query: 489 DSISLCKEDKG 499
             +    E++G
Sbjct: 477 QLLKRPAEEQG 487


>gi|167896429|ref|ZP_02483831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
          Length = 513

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 179/520 (34%), Positives = 270/520 (51%), Gaps = 19/520 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRSELDALRAQL 473

Query: 492 SLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
               +  + L R L ++IAL + A  L  A    ++D F+
Sbjct: 474 GTPPDALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFI 513


>gi|316933652|ref|YP_004108634.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315601366|gb|ADU43901.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 549

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 200/533 (37%), Positives = 295/533 (55%), Gaps = 6/533 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQE 72
           + QPS  +    NQ P    ++ + +D  LL A+  N  +  H ELE  G+   +    E
Sbjct: 1   MTQPSFATHEVFNQSPPLPDLDLFGADRPLLEAVTFNQGANAHVELEAFGKAWGTTEMAE 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN  TP+L  +   G R D+VEFHP++H L+  S   GLH S WD   +P     +
Sbjct: 61  RGRLANEYTPKLKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPAGH-AS 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAA+ Y+ AQ+E GHL   ++T AS+ AL   P +     P + +R+YD +      
Sbjct: 120 EVVRAAKFYMAAQVETGHLCPVTMTRASVAALGAQPDLLAQVMPVLGTRQYDQSFAPWTA 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  ++IG+G+TEK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LAQ +  
Sbjct: 180 KRGMSIGMGMTEKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LSCFFMPRFAPDGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGEPGRGVRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR SLA A+H+ R R V    L D  +M   +AD+AL + A+ AL
Sbjct: 299 VQLTRQDCAIASAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FDEA +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDEAPNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSI 491
           HYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD  + +G      L    
Sbjct: 419 HYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQALIQDTSALTGGPAAAGLIARA 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            L  +++  AR   E +    +AAA         A++F   R +    S +  
Sbjct: 479 LLQVDNERTARLAVE-MLAKLAAAAALNEIHPPHAELFARTRLVPEPASLYGA 530


>gi|146341411|ref|YP_001206459.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146194217|emb|CAL78239.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation
           damage) [Bradyrhizobium sp. ORS278]
          Length = 547

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 211/547 (38%), Positives = 310/547 (56%), Gaps = 7/547 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQE 72
           + QPS ++    NQ P F  +N +++D  L+  +A N  S   +EL   G+   S    E
Sbjct: 1   MTQPSLETHEVFNQSPPFADVNLFTADRPLMDAVAANGGSGAEQELIAFGKLWGSAEMAE 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN NTP+L ++   G R D VEFHPA+H ++ +++  GLH S W    +PV    A
Sbjct: 61  QGRLANENTPKLRSFDAKGFRRDAVEFHPAYHHMMAQAVAAGLHNSTWTAQGKPVGGS-A 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAA+ Y+ +Q+E+GHL   ++T AS+ AL   P +       I +R+YDP      Q
Sbjct: 120 EVVRAAKFYVASQVESGHLCPITMTRASVAALAPQPDLLAQTMRVIATRDYDPAFAPWWQ 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + +G+G+TEK+GGTD+ A  +   + +DG Y ++GHKWF+S+PM DAF++LAQ EG 
Sbjct: 180 KRGMTLGMGMTEKQGGTDVRANMTSATRSTDG-YRITGHKWFMSAPMCDAFLVLAQAEGG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DG+ N L +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LTCFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAERVGEEGRGISTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + A  AL
Sbjct: 299 VQLTRQDCAISSAGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLADMALHVEATVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FD     ++EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDRMTDDADEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSGKKVITILRDSI 491
           HYRESP N+I  GSGN M LDVL  L +       + +TL +   G  G      +    
Sbjct: 419 HYRESPVNAIWEGSGNVMCLDVLRALSREPEAAAAVLNTLSDATRGLPGAADAVAMIGQA 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH-GRFN 550
               + + +AR   EK+AL S+AAAL        A++F   R      S +  +      
Sbjct: 479 FRRGDSERVARLAVEKLALLSAAAALNAVTPAH-AELFAATRLATVHPSMYGAVDLAPAA 537

Query: 551 AAHIIDS 557
           +  +++ 
Sbjct: 538 SRALLER 544


>gi|33602382|ref|NP_889942.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33576821|emb|CAE33901.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 552

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 188/555 (33%), Positives = 284/555 (51%), Gaps = 20/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELAR 75
           QP  +    NQ       + Y +D +L   +    +   + EL   G ++      E A 
Sbjct: 2   QPFLTHLVTNQVAPLEDYSLYETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN N+P+L AY P G R DKV FHPAW+AL+   +  GLH   W +         AH  
Sbjct: 62  EANRNSPRLLAYDPTGHRQDKVAFHPAWNALMTGIVARGLHSRAWAQPV-----PGAHVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPM 191
           RAA   +  Q+EAG L   ++T A++  L   P       +DW   ++SRE+D ++    
Sbjct: 117 RAAAYLMQGQVEAGTLCPTTMTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIG 176

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLA 247
           +K    IG+GLTEK+GG+D+ ++ ++ + +        Y L+GHKWFLS P +DA ++LA
Sbjct: 177 RKRGALIGMGLTEKQGGSDLRSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLA 236

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  +GCF VPR + DG  N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T 
Sbjct: 237 RTDEGLGCFFVPRWVPDGPRNAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTA 296

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S + +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  
Sbjct: 297 VLLEMAATTRLDCVLGSAALLRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESE 356

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT L+ RLA + DE ++     A  R+  P  K W CK A A + E ME +GG+GY+EE
Sbjct: 357 AATVLALRLARAVDE-RADPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEE 415

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG---SSGKKVI 484
             +AR YRE+P NSI  GSGN M LDVL  L +       L   L++  G   +  + + 
Sbjct: 416 APLARLYREAPVNSIWEGSGNVMALDVLRGLAREAEALPGLRDELDRARGVVPAYDQALD 475

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             L          + LAR +   +A    AA L R     +   F   R           
Sbjct: 476 DWLALVAQPDSVPQALARRVAAGLATLWQAALLIRHAPAPVGAAFAATRLHAPAGIVGAA 535

Query: 545 LHGRFNAAHIIDSLY 559
                + A I+   +
Sbjct: 536 PID--DPAPILARAW 548


>gi|39936178|ref|NP_948454.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39650033|emb|CAE28556.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 561

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 203/538 (37%), Positives = 298/538 (55%), Gaps = 6/538 (1%)

Query: 10  LAMNQVHQPS-DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLS 67
           LA   + QPS  +    NQ P    ++   +D  LL A+  N  +  H ELE  G+    
Sbjct: 8   LAGTAMTQPSFATHEVFNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGI 67

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E  R+AN  TP+L  +   G R D+VEFHP++H L+  S   GLH S WD   +P 
Sbjct: 68  TEMAERGRLANEYTPKLKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKP- 126

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               +  +RAA+ Y+ AQ+E GHL   ++T AS+ AL + P +     P + +R+YDP+ 
Sbjct: 127 AGNASEVVRAAKFYMAAQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSF 186

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                K  ++IG+G+TEK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LA
Sbjct: 187 APWTAKRGMSIGMGMTEKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLA 245

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           Q +  + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+L     
Sbjct: 246 QADEGLSCFFMPRFQPDGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIR 305

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  L   D AI S   MR SLA A+H+ R R V    L D  +M   +AD+AL + 
Sbjct: 306 TIIQMVQLTRQDCAIASAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVE 365

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+ AL  RL  +FDEA +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+
Sbjct: 366 ASVALVMRLCRAFDEAPNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVED 425

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITI 486
             +ARHYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD  + +G      
Sbjct: 426 GILARHYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQALIQDTSALTGGPAAAG 485

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           L     L  +++  AR   E +    +AAA         A++F   R +    + +  
Sbjct: 486 LIARALLQVDNERTARLAVE-MLAKLAAAAALNEIHPPHAELFARTRLVPEPATLYGA 542


>gi|167587918|ref|ZP_02380306.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 550

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 184/554 (33%), Positives = 284/554 (51%), Gaps = 17/554 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELAR 75
               +    NQ    +  N +++D+ L   +A         +L+  G  + S    +LA 
Sbjct: 1   MTGPTHAVSNQFDELVDYNLFTTDAALREALARAGAGWAAPQLDAYGARLGSADTAQLAD 60

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN+  P+LHA+   G R D+VEFHPAWHALL     +G     +  +     R      
Sbjct: 61  DANHYPPELHAFDRRGRRIDRVEFHPAWHALLGLYRAEGFVSLAFRDT-----RPGRWAA 115

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+EAG L   ++T A++  L   P + +    K++S  YDP +     K S
Sbjct: 116 TAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEMLRDKLYSDVYDPRDVPVADKRS 175

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           + IG+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+ + 
Sbjct: 176 IWIGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTDA 235

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           G   CF VPR   DG+ N +  QRLK+K+GNRSN++ E+E  + +G +LGD       + 
Sbjct: 236 GGPSCFYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTII 295

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA 
Sbjct: 296 EMATCTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAAL 355

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+ RLA +F+       E A+ RI+ P  K+W CK A  +  E ME  GG+GY+++  I
Sbjct: 356 ALAMRLAAAFER-DDTPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPI 414

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR +RE+P NSI  GSGN M LDVL  + +  +    LF  L +  G     +  +  LR
Sbjct: 415 ARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDELRELGGDEPRIRAALDGLR 474

Query: 489 DSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCML 545
             ++   +  +   R   +++ALA+ A  L R     +AD F+  R  +           
Sbjct: 475 AMLAAPPDTLEASGRLFAQRLALAAQACLLRRDAPAAVADAFVATRLAEPAWGRIAGGFD 534

Query: 546 HGRFNAAHIIDSLY 559
               + A ++   Y
Sbjct: 535 PRGVDVAALLQRAY 548


>gi|33596331|ref|NP_883974.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33566100|emb|CAE37000.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 552

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 188/555 (33%), Positives = 284/555 (51%), Gaps = 20/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELAR 75
           QP  +    NQ       + Y +D +L   +    +   + EL   G ++      E A 
Sbjct: 2   QPFLTHQVTNQVAPLEDYSLYETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN N+P+L AY P G R DKV FHPAW+AL+   +  GLH   W +         AH  
Sbjct: 62  EANRNSPRLLAYDPTGHRQDKVAFHPAWNALMTGIVARGLHSRAWAQPV-----PGAHVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPM 191
           RAA   +  Q+EAG L   ++T A++  L   P       +DW   ++SRE+D ++    
Sbjct: 117 RAAAYLMQGQVEAGTLCPTTMTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIG 176

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLA 247
           +K    IG+GLTEK+GG+D+ ++ ++ + +        Y L+GHKWFLS P +DA ++LA
Sbjct: 177 RKRGALIGMGLTEKQGGSDLRSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLA 236

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  +GCF VPR + DG  N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T 
Sbjct: 237 RTDEGLGCFFVPRWVPDGPRNAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTA 296

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S + +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  
Sbjct: 297 VLLEMAATTRLDCVLGSAALLRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESE 356

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT L+ RLA + DE ++     A  R+  P  K W CK A A + E ME +GG+GY+EE
Sbjct: 357 AATVLALRLARAVDE-RADPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEE 415

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG---SSGKKVI 484
             +AR YRE+P NSI  GSGN M LDVL  L +       L   L++  G   +  + + 
Sbjct: 416 APLARLYREAPVNSIWEGSGNVMALDVLRGLAREAEALPGLRDELDRARGVVPAYDQALD 475

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             L          + LAR +   +A    AA L R     +   F   R           
Sbjct: 476 DWLALVAQPDSVPQALARRVAAGLATLWQAALLIRHAPAPVGAAFAATRLHAPAGIVGAA 535

Query: 545 LHGRFNAAHIIDSLY 559
                + A I+   +
Sbjct: 536 PID--DPAPILARAW 548


>gi|192291895|ref|YP_001992500.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285644|gb|ACF02025.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 549

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 201/533 (37%), Positives = 296/533 (55%), Gaps = 6/533 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQE 72
           + QPS  +    NQ P    ++   +D  LL A+  N  +  H ELE  G+        E
Sbjct: 1   MTQPSFATHEVFNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGITEMAE 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN  TP+L  +   G R D+VEFHP++H L+  S   GLH S WD   +P     +
Sbjct: 61  RGRLANEYTPKLKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKP-AGNAS 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +RAA+ Y+ AQ+E GHL   ++T AS+ AL + P +     P + +R+YDP+      
Sbjct: 120 EVVRAAKFYMAAQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSFAPWTA 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  ++IG+G+TEK+GGTD+    ++  +  D  Y + GHKWF+S+PM DAF++LAQ +  
Sbjct: 180 KRGMSIGMGMTEKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+L      +  M
Sbjct: 239 LSCFFMPRFQPDGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR SLA A+H+ R R V    L D  +M   +AD+AL + A+ AL
Sbjct: 299 VQLTRQDCAIASAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FDEA +   EAAY R++ P  KYW CK AP  + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDEAPNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSI 491
           HYRE+P N+I  GSGN M LDVL  + + ++   ++   L QD  + +G      L    
Sbjct: 419 HYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQALIQDTSALTGGPAAAGLIARA 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            L  +++  AR   E +    +AAA         A++F   R +    + +  
Sbjct: 479 LLQVDNERTARLAVE-MLAKLAAAAALNEIHPPHAELFARTRLVPEPATLYGA 530


>gi|194366730|ref|YP_002029340.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349534|gb|ACF52657.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 545

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 178/544 (32%), Positives = 276/544 (50%), Gaps = 10/544 (1%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELA 74
           + P ++   LNQPP F G   ++ D  L+  +           L + G          L 
Sbjct: 9   NAPFETHVVLNQPPPFAGRQLWTDDVALMEAVQREGAGSFAPRLAVYGALAG-DELYRLG 67

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN + P+L  +   G R D VEFHPA+H L+  +   G+    W        +  AH 
Sbjct: 68  FDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKSHGVAGLSWHEP-----QPGAHV 122

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA  YL  Q EAG     ++T A++  L + P +  +WA K  +  YDP +     K 
Sbjct: 123 ARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPRDVPATDKA 181

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++LAQ  G + 
Sbjct: 182 GITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGLT 241

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           C L+PR L DG  N     RLK+K+G+ +NA+ E+EF     + +G+       +  M +
Sbjct: 242 CLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMVM 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD  + + + MR++L++A+H+AR R   G +L++ P+M   +AD+AL+  AAT LS 
Sbjct: 302 MTRLDCMLGAAAEMRMALSQALHHARHRRTFGKLLVEHPLMANVLADLALESEAATVLSM 361

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A + D A   + EAA AR+   + KYW CK A   + EA EC+GG+GY+EE  + R Y
Sbjct: 362 RIARAVDRAGVDANEAALARVGTALGKYWVCKRAAGFVNEAQECLGGAGYVEESMLPRLY 421

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++P NSI  GSGN   LDVL  L +     E L + L   +     +    L+   +  
Sbjct: 422 RQAPLNSIWEGSGNIQCLDVLRALAREPEALEALRTELA-SVADRDARYAAALQRWAAAA 480

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
             D+  AR   E+ AL   AA       + +A+ F+ +R           L    + + +
Sbjct: 481 PPDESQARLFCERTALLLQAAL-LLRAHSPMAEAFVRSRLEGEHGLAFGTLPVGLDLSAM 539

Query: 555 IDSL 558
           +   
Sbjct: 540 LARA 543


>gi|300705483|ref|YP_003747086.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299073147|emb|CBJ44505.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 553

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 184/553 (33%), Positives = 291/553 (52%), Gaps = 21/553 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N ++SD+ L   +       H + L + GE + +      A  AN 
Sbjct: 6   THRVFNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRVFGETLGAPRTLAWAAEANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A 
Sbjct: 66  YPPELHTHARTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG
Sbjct: 121 YFMQAQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y L+GHKWF S+PM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  + GS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L+DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLVDQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR
Sbjct: 361 MMALGSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + +   + G + +     ++ 
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIGRAPDDALRLMQDIGER--ARGHRAVRAELAALQ 478

Query: 493 LCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
                     +  AR + + +AL + AA +      D A+ F+ +RF          + G
Sbjct: 479 ALLHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRFHHQHGRVFGTVEG 538

Query: 548 -RFNAAHIIDSLY 559
                  ++   +
Sbjct: 539 NTQELGAVLQRAW 551


>gi|299135139|ref|ZP_07028330.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590116|gb|EFI50320.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 543

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 206/529 (38%), Positives = 297/529 (56%), Gaps = 3/529 (0%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMA 77
           S +   LNQ P F  +N +  D  L+  ++ + +  H +EL L G    S    E  R+A
Sbjct: 2   SSARAVLNQSPPFCDINLFGCDVPLMEAVSAYGARDHAEELSLFGRLWGSAAMAERGRLA 61

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P+L  Y   G R D+VEFHPA+H L+  S H GLH S W  +        A  +RA
Sbjct: 62  NENPPKLKTYDARGFRRDEVEFHPAYHELMAHSAHAGLHNSTWSGAGT-SAGGAAEVVRA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A+ ++ AQ+E GHL   ++T AS+ AL +   +     P + +  YDP      QK  + 
Sbjct: 121 AKFFIAAQVETGHLCPITMTRASVAALASDEALRVQIMPVLGTNVYDPAFMPWWQKRGMT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GGTD+ A  ++ ++  D  Y ++GHKWF+S+PMSDAF++LAQVEG + CF+
Sbjct: 181 IGMGMTEKQGGTDVRANVTRAEREGD-YYRITGHKWFMSAPMSDAFLVLAQVEGGLTCFV 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +PR   DG+ N L +QRLK+K+GNRSNA+ E+EF   +   LG+       +  M  L  
Sbjct: 240 MPRFAPDGTVNALRFQRLKDKLGNRSNASSEVEFEGAYALRLGEEGRGIATIIQMVSLTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D AI S   MR  LA A+H+AR R V G  L DQP+M+  +AD+AL + A TAL  RL 
Sbjct: 300 QDCAIASAGLMRSGLAHALHHARHRSVFGRHLADQPLMRSVLADMALHVEATTALVMRLC 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +FD A     E+A  R+M P+ KYW CK APA + EAMEC+GG+GY+EE  +ARHYRE+
Sbjct: 360 RAFDHAPHDPVESATMRLMTPVVKYWVCKSAPAFLHEAMECLGGNGYVEEGILARHYREA 419

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
           P N+I  GSGN M LDVL ++ +  +    + + L Q+ G        +   + +L + D
Sbjct: 420 PVNAIWEGSGNVMCLDVLRVVSRERDAAAAVLAHLAQEGGDLPGVKAALSATAAALGQPD 479

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
              A     +    ++AA   +A     A +F + R        +  + 
Sbjct: 480 AEGAARNAVESLAVAAAAVALKAVHPGHAALFAQTRLAQRRGLMYGAVD 528


>gi|85716407|ref|ZP_01047379.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85696764|gb|EAQ34650.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 546

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 197/532 (37%), Positives = 289/532 (54%), Gaps = 5/532 (0%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQEL 73
           + QP  +    NQ P F  ++ ++ D  L   +A       + E+E  G++  S      
Sbjct: 1   MTQPFRTHEVFNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDEMEAFGKHWGSTAMAAR 60

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  +   G R D+VEFHPA+H L+  S    LH S W    +P     A 
Sbjct: 61  GRLANENPPKLRLFDARGNRRDEVEFHPAYHELMANSARASLHNSTWTADGKPAAG-AAE 119

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +RAA+ Y+ AQ+E GHL   ++T AS+  L   P +  +  P I +  YDP+      K
Sbjct: 120 VVRAAKFYMAAQVETGHLCPITMTRASVATLAVQPDLLAEAMPVIATCSYDPSFAPWRTK 179

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             + +G+G+TE++GGTD+ A  ++  +  D  Y ++GHKWF+S+PM DAF++LAQ +G +
Sbjct: 180 RGMTLGMGMTERQGGTDVRANQTRAVRDGDA-YRITGHKWFMSAPMCDAFLVLAQADGGL 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR   DGS N +  QRLK+K+GNRSNA+ E++F   +   +G+       +  M 
Sbjct: 239 TCFFMPRFRPDGSVNTIHLQRLKDKLGNRSNASSEVQFIEAYARRVGEEGKGIRTIIQMV 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   D AI SV  MR  LA A+H+AR R V    L+DQP+M+  +AD+AL + A+ AL 
Sbjct: 299 QLTRQDCAIASVGLMRSGLAHALHHARHRSVFQKRLVDQPLMQAVLADMALHVDASLALV 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL  +FDEA S  + A + R++ P  KYW CK +P  ++EAMEC+GG+GY+EE  + RH
Sbjct: 359 MRLCRAFDEASSDPKAATWMRLLTPAVKYWICKSSPGFLSEAMECLGGNGYVEENVLPRH 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           YRE+P N+I  GSGN M LDVL  L + G      L   +   +G  G            
Sbjct: 419 YREAPVNAIWEGSGNVMCLDVLRALAREGEAAVAVLEDFVVDTMGLPGAAEAVAFLAKTF 478

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              + + +AR   E +A  ++AAAL R   +  A +F   RF          
Sbjct: 479 RRPDGERVARQAVETLAQLAAAAALNRTAPDQAA-LFAATRFGGTHGRMFGT 529


>gi|221069663|ref|ZP_03545768.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714686|gb|EED70054.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 558

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/561 (31%), Positives = 280/561 (49%), Gaps = 26/561 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSVVHKELELLGEYVLSCTAQELAR 75
           Q  D+    NQ      +N   +D+ L   L+          L    + +      E A 
Sbjct: 2   QALDTHDVFNQFDELTDINLLQADTALQEVLLRQQAQGFVPALSRFAQQLGEKQNWEHAE 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN +TP+L  +   G   D VEFHP+WH L++     GL    ++        +     
Sbjct: 62  LANRHTPELQRFDARGRVLDAVEFHPSWHRLMQLYREQGLISLPFESQ-----GRGRWSA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+E G L   ++T+A++  L   PR+      ++FS EYDP +    QK S
Sbjct: 117 WAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPRLWSQLQAQLFSHEYDPRDLPLAQKKS 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE- 250
           + IG+G+TEK+GG+D+ A T+  + + DG     Y L GHKWF S+PM DA +++A++  
Sbjct: 177 IWIGMGMTEKQGGSDVRANTTVARPVHDGGRGGEYLLRGHKWFFSAPMCDAHLVVARMAT 236

Query: 251 -----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                G   CF VPR   DGS N L  QRLK+K+GNRSN++ E+E  + +G L+G+    
Sbjct: 237 ASGELGGHACFFVPRWRPDGSKNPLRVQRLKDKVGNRSNSSAEVELQDAWGILMGEEGRG 296

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD+AL+
Sbjct: 297 IPTIIEMASYTRLNCVLGSAAIVRSATVQSIAYARQRSAFGKHLSDQPLMASVLADLALE 356

Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A+  L+  LA +++ EA       A+ RIM P  K+W CK +  +  EAME  GG+GY
Sbjct: 357 SEASMQLAMHLAQAYESEADGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           ++E  ++R +RE+P NSI  GSGN M LDVL  + +       L   L     ++   ++
Sbjct: 417 VQESIVSRLFREAPVNSIWEGSGNVMCLDVLRAMGREPEAARLLLQDLSD--MAADHPLL 474

Query: 485 TILRDSI-----SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           T +  S+     +     +  AR L + + L + A  L+R     +AD F++ R      
Sbjct: 475 TAMTQSLARRLSAAPDALEPQARRLVQDLCLLAQACLLHRHAPAPMADGFIQTRLGAQGG 534

Query: 540 S--THCMLHGRFNAAHIIDSL 558
           +           + A I++  
Sbjct: 535 AMVVGAFDPAGLDIAAILERA 555


>gi|300715049|ref|YP_003739852.1| acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661]
 gi|299060885|emb|CAX57992.1| Acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661]
          Length = 542

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 180/526 (34%), Positives = 269/526 (51%), Gaps = 11/526 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SDS L  A++          L  +G+ + S  + EL R+AN 
Sbjct: 5   THTVFNQPLPLANSNLFLSDSPLRDAVLREGAGWDGDLLASVGQQLGSAESLELGRLANS 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  Y P GER D V FHPAWH L++    + +H   W  +        A   RAAR
Sbjct: 65  SPPELLRYDPCGERLDDVRFHPAWHLLMQGLTANRVHNLPWLDNAPET----AFVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ+E+G L   ++T  ++  L    P    DW P + S  YD   K    K  + I
Sbjct: 121 FMLHAQVESGSLCPVTMTFGAIPLLQKHLPAAFADWLPPLLSDRYDAHIKEAPLKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GGTD+ + T++ + ++       Y L+GHKWF S P SDA ++LAQ +G + 
Sbjct: 181 GMGMTEKQGGTDVLSNTTRAEPVASRGSGECYQLTGHKWFFSVPQSDAHLVLAQAKGGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL  G  N +  +RLK K+GNRSNA+ E+EF    G+L+G+       +  M  
Sbjct: 241 CFFLPRLLPGGEKNAVHIERLKEKLGNRSNASSEVEFLAASGWLIGEEGEGVRQILKMGG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
               D A+ S + MR + + A+++A  R V G  L+DQP+M++ +A  AL +   TA+  
Sbjct: 301 YTRFDCALGSHAMMRRAFSVALYHAHHRQVLGKNLVDQPLMRQLLASQALVLEGQTAMLM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++   ++ + E  ++R+  P  KY  CK     +AE+ME +GG GY EE  + R Y
Sbjct: 361 RLARAWSH-QATASETLFSRLFTPAAKYVVCKRGIGFVAESMEVLGGIGYCEESELPRIY 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDVL +L K   + E L +  +   G +        +  ++  
Sbjct: 420 REMPVNSIWEGSGNVMCLDVLRVLSKQPGVREMLSAEFDAVKGQNRHFDSLWRQIKLAAG 479

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           K  +  AR LTE +   +    +       +AD +          S
Sbjct: 480 KPQEAQARNLTEGLFALACGVQVMTHLEPALADAWCRQMLDRRGFS 525


>gi|33593334|ref|NP_880978.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33572690|emb|CAE42613.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332382743|gb|AEE67590.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 552

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 188/555 (33%), Positives = 284/555 (51%), Gaps = 20/555 (3%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELAR 75
           QP  +    NQ       + Y +D +L   +    +   + EL   G ++      E A 
Sbjct: 2   QPFLTHQVTNQVAPLEDYSLYETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAA 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN N+P+L AY P G R DKV FHPAW+AL+   +  GLH   W +         AH  
Sbjct: 62  EANRNSPRLLAYDPTGHRQDKVAFHPAWNALMTGIVARGLHSRAWAQPV-----PGAHVA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPM 191
           RAA   +  Q+EAG L S ++T A++  L   P       +DW   ++SRE+D ++    
Sbjct: 117 RAAAYLMQGQVEAGTLCSTTMTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIG 176

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLA 247
           +K    IG+GLTEK+GG+D+ ++ ++ + +        Y L+GHKWFLS P +DA ++LA
Sbjct: 177 RKRGALIGMGLTEKQGGSDLRSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLA 236

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +  +GCF VPR + DG  N +  +RLK+K+GNRSNA+ E+EF   +G +LG+    T 
Sbjct: 237 RTDEGLGCFFVPRWVPDGPRNAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTA 296

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +M     LD  + S + +R ++A+A+H+A +R   G  L+ QP+M+  +AD+AL+  
Sbjct: 297 VLLEMAATTRLDCVLGSAALLRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALENE 356

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AAT L+ RLA + DE ++     A  R+  P  K W CK A A + E ME +GG+GY+EE
Sbjct: 357 AATVLALRLARAVDE-RADPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEE 415

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG---SSGKKVI 484
             +AR YRE+P NSI   SGN M LDVL  L +       L   L++  G   +  + + 
Sbjct: 416 APLARLYREAPVNSIWEDSGNVMALDVLRGLAREAEALPGLRDELDRARGVVPAYDQALD 475

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             L          + LAR +   +A    AA L R     +   F   R           
Sbjct: 476 DWLALVAQPDSVPQALARRVAAGLATLWQAALLIRHAPTPVGAAFAATRLHAPAGIVGAA 535

Query: 545 LHGRFNAAHIIDSLY 559
                + A I+   +
Sbjct: 536 PID--DPAPILARAW 548


>gi|300692874|ref|YP_003753869.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299079934|emb|CBJ52611.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 557

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 187/562 (33%), Positives = 291/562 (51%), Gaps = 26/562 (4%)

Query: 17  QPSD-SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELA 74
            P+D +    NQ P     N ++SD+ L   +       H + L   GE + +      A
Sbjct: 1   MPADATHRVFNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRAFGEMLGTPRTLAWA 60

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN   P+LH +   GER D+V F PAWHALL      GL    +        R  A  
Sbjct: 61  AEANQYPPELHTHTRTGERIDRVRFDPAWHALLGLIRSQGLQALPFAEP-----RAGAWA 115

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A  ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QK+
Sbjct: 116 ARTAGYFMQAQIESGSLCPATMTFASISVLRKETPLFADLAPRLYAREHDARDLPWRQKS 175

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK--------ISDGIYCLSGHKWFLSSPMSDAFIML 246
           ++ IG+G+TEK+GG+D+ + T+                 + L+GHKWF S+PM DA +++
Sbjct: 176 AILIGMGMTEKQGGSDVRSNTTVAVPLGGQDGGEGRGATHALTGHKWFFSAPMCDAHLVV 235

Query: 247 AQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A++   +G + CF VPR  +DGS N +  QRLK+K+GNRSNA+ E+EF    G L+G+  
Sbjct: 236 ARMGAEDGPLSCFFVPRFRDDGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAG 295

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+A
Sbjct: 296 RGIPTIIEMATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLA 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+  AAT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+G
Sbjct: 356 LESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNG 415

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+EE  +AR YRE+P NSI  GSGN M LDVL  + +  +   +L   ++    + G + 
Sbjct: 416 YVEESPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRTPDDALRLMQDIDAR--AQGHRT 473

Query: 484 ITILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           +     ++           +  AR + + +AL + AA +      D A+ F+ +RF    
Sbjct: 474 VRAELAALQALLHQSGDIQETSARRVAQGLALTAQAALMLAHAHADDAERFIASRFHHQH 533

Query: 539 HSTHCMLHGRFNA-AHIIDSLY 559
                 L G   A   ++   +
Sbjct: 534 GRVFGTLEGNAQALGAVLQRAW 555


>gi|85706346|ref|ZP_01037440.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669119|gb|EAQ23986.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 542

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 180/540 (33%), Positives = 274/540 (50%), Gaps = 13/540 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           ++    NQP     ++ ++ D  L    A       + L   G  + +   +E  R AN 
Sbjct: 11  ETHQVTNQPAPRGDLDLWAGDPGLQ-THATAAGADPEVLAAYGARIGTEALREAGRAANR 69

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  +  GG R D+V FHPA+H L+R  I  G     W+ +      +  H   AA 
Sbjct: 70  HPPELVLFDAGGRRLDEVRFHPAYHDLMRVGIGAGYAALAWEGA------RGGHASHAAM 123

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +Y+ +Q+E G     ++T A++ AL     +  DW PK+ +R YDP  K   +K    +G
Sbjct: 124 VYMTSQVEPGVCCPMTMTYAAVPALRVDKALLADWVPKLTARTYDPGAKPLARKPGATLG 183

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+DI A  +      D  Y L GHKWF S+PMSD F+ LAQ    + CFLVP
Sbjct: 184 MAMTEKQGGSDIRATATTATPEGD-TYRLVGHKWFCSAPMSDGFLTLAQAPEGLTCFLVP 242

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R LE G  NG+  QRLK+K+GNR+NA+ E+E+     + LGD +     + +M     LD
Sbjct: 243 RWLE-GGRNGIQIQRLKDKLGNRANASAEIEYHGAIAYRLGDESAGLRTILEMVHHTRLD 301

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+     MR +L +A ++A  R      LIDQP+M+  +AD+ALD     AL   +A +
Sbjct: 302 TAMAPAGLMRAALDQAQYWACHRSAFQKRLIDQPLMRAVLADLALDWEGTLALGLHVARA 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD     + + A+AR+   + K+   K+ P V+ EAME +GG GY+E+  +   YRE+P 
Sbjct: 362 FD--GRGAADRAFARLGVALAKFMGNKLCPCVVYEAMEAMGGMGYVEDTPLPMLYREAPL 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDK 498
           NSI  GSGN + LD+L  L K     E L + L    G   +    +     +  K  D+
Sbjct: 420 NSIWEGSGNVICLDILRTLRKEPLAGEVLSAELASVAGQDSRFDAALKAHMQTFPKLPDE 479

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR+  E +A   +A+ L R   + +A  ++  R  D        + G  + A I+  L
Sbjct: 480 AQARWYAESLATLLTASVLMRHAPDAVASAYIATRLSDPRGRVAGAI-GTLDTAPILARL 538


>gi|207727600|ref|YP_002255994.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590839|emb|CAQ56451.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 553

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 183/553 (33%), Positives = 287/553 (51%), Gaps = 21/553 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N ++SD+ L   +       H + L   GE + +      A  AN 
Sbjct: 6   THRVFNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A 
Sbjct: 66  YPPELHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG
Sbjct: 121 YFMQAQIESGSLCPATMTFASISVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y L+GHKWF S+PM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  + GS N +  QRLK+K+GNRSNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR
Sbjct: 361 MMALGSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + +   + G + +     ++ 
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIGRAPDDALRLMQDIGER--ARGHRAVRAELAALQ 478

Query: 493 LCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
                     +  AR   + + L + AA +      D A+ F+ +RF          + G
Sbjct: 479 ALLHQSGDIQEAAARRGAQGLVLTAQAALMLAHAHADDAERFIASRFHHQHGRVFGTVEG 538

Query: 548 -RFNAAHIIDSLY 559
                  ++   +
Sbjct: 539 NTQELGAVLQRAW 551


>gi|83745987|ref|ZP_00943043.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207741993|ref|YP_002258385.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83727381|gb|EAP74503.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593379|emb|CAQ60306.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 553

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 184/553 (33%), Positives = 288/553 (52%), Gaps = 21/553 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N ++SD+ L   +       H + L   GE + +      A  AN 
Sbjct: 6   THRVFNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D V F PAWHALL     +GL    + +      R  A  +R A 
Sbjct: 66  YLPELHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG
Sbjct: 121 YFMQAQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIG 180

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252
           +G+TEK+GG+D+ + T+    +        Y L+GHKWF SSPM DA +++A++   +G 
Sbjct: 181 MGMTEKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSSPMCDAHLVVARMGAEDGP 240

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR  + GS N +  QRLK+K+GN SNA+ E+EF    G L+G+       + +M
Sbjct: 241 LSCFFVPRWRDGGSKNPVQIQRLKDKLGNCSNASSEVEFRGAEGILIGEAGRGIPTIIEM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  AAT L
Sbjct: 301 ATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLL 360

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE  +AR
Sbjct: 361 MMALGSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMAR 420

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YRE+P NSI  GSGN M LDVL  + +  +   +L   + +   + G + +     ++ 
Sbjct: 421 LYREAPVNSIWEGSGNVMCLDVLRAIGRAPDDALRLMQDIGER--ARGHRAVRAELAALQ 478

Query: 493 LCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
                     +  AR + + +AL + AA +      D A+ F+ +RF          + G
Sbjct: 479 ALLHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRFHHQHGRVFGTVEG 538

Query: 548 -RFNAAHIIDSLY 559
                  ++   +
Sbjct: 539 NTQELGAVLQRAW 551


>gi|319760852|ref|YP_004124789.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822757|ref|YP_004386060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|317115413|gb|ADU97901.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308129|gb|AEB82544.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 553

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 176/552 (31%), Positives = 266/552 (48%), Gaps = 18/552 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ P     +  ++D  L  AL           L      +       LA  AN 
Sbjct: 5   THHVFNQFPELYDYDPLATDPALCEALARTGAGWARPALNGYAARLGRTETYMLAEQANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + P+L  +   G R D +EFHP WHAL+      GL    +        R       AA 
Sbjct: 65  HLPELRRFDSRGRRIDALEFHPGWHALMALYRGQGLVSQPFRE-----ARAGRWAAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T A++  L   P +      +++S  YD  +     K S+ +G
Sbjct: 120 FYLHGQVEQGTLCPATMTQAAIPLLQKEPALWAQLQERLYSDAYDARDLPVQDKASIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+P  DA ++ A+V+  G  
Sbjct: 180 MGMTEKQGGSDVRANTTVATAVGAGGRGGEYLLRGHKWFFSAPQCDAHLVTARVQEGGPF 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 240 ACFYVPRWRPDGSRNAVRVQRLKDKLGNRSNASGEVEFEDAWGVLMGEEGRGIPTIIEMA 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+    S + +R +  +AI YAR+RH  G  L +QP+M+  +AD+AL+  A+  L 
Sbjct: 300 GYTRLNCVAGSAAILRQATVQAIAYARQRHAFGKALAEQPLMRAVLADLALESEASLVLL 359

Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            RLA +F+ E      + A+ R M P  K+W CK A  +  EAME  GG+GY+E+  +AR
Sbjct: 360 MRLAEAFEREGDGDPAQRAWKRAMTPAAKFWVCKRAVELTGEAMEVFGGNGYVEDGVMAR 419

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490
            +RE+P NSI  GSGN M LDVL  L +       L + L+       +    +  L+  
Sbjct: 420 LFREAPVNSIWEGSGNVMCLDVLRALAREPGAARALLAELQPAAQGEPRIAAALQGLQAL 479

Query: 491 ISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTHCMLHGR 548
           ++    E + L R L +++ L + A  L       +AD F+  R  D         +  R
Sbjct: 480 LAASADELEALGRVLAQRLVLVAQACLLRAHAPACVADAFIATRLGDGGAGRVAGAIDTR 539

Query: 549 -FNAAHIIDSLY 559
             +   I+   +
Sbjct: 540 GMDVDAILARAF 551


>gi|209884925|ref|YP_002288782.1| protein AidB [Oligotropha carboxidovorans OM5]
 gi|209873121|gb|ACI92917.1| protein AidB [Oligotropha carboxidovorans OM5]
          Length = 537

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 292/522 (55%), Gaps = 5/522 (0%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83
           LNQ P F  ++ ++ D  L   +A + +  H  EL   G+   S    EL R+AN N P+
Sbjct: 2   LNQSPPFCDVDLFACDVPLKEAVAAYGAKDHTTELSAFGKLWGSAEMAELGRLANENLPK 61

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +   G R D+VEFHPA+H L+  S H GLH S W  S        A  +RAA+ ++ 
Sbjct: 62  LQTFDARGFRRDEVEFHPAYHELMAVSAHAGLHNSTWASS-GAAAGGNAEVLRAAKFFIA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           AQ+E GHL   ++T AS+ AL +   +     P +  R YDP       K  + IG+G+T
Sbjct: 121 AQVETGHLCPITMTRASVAALASNEALRARIMPVLSQRAYDPGFAPWWGKRGMTIGMGMT 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E++GGTD+    S+ ++  +    + GHKWF+S+PM DAF++LAQ +G + CF +PR   
Sbjct: 181 ERQGGTDVRVNISRAERDGEAYRII-GHKWFMSAPMCDAFLVLAQTDGGLTCFFMPRFTP 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  N L +QRLKNK+GNRSNA+ E+EF   +   LG+       +  M  L   D AI 
Sbjct: 240 DGEINALHFQRLKNKLGNRSNASSEVEFEAAYALRLGEEGRGVATIIQMVSLTRQDCAIA 299

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   MR  LA A+H+AR R V    L DQP+M+  +AD+AL + AATAL  RL  +FD A
Sbjct: 300 SAGLMRSGLAHALHHARHRSVFQKRLADQPLMRSVLADMALQVEAATALVMRLCRAFDRA 359

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   E A  R+M P+ KYW CK APA + EAMEC+GG+GY+EE  +ARHYRE+P N+I 
Sbjct: 360 STDPNENATMRLMTPVVKYWVCKSAPAFLYEAMECLGGNGYVEEGILARHYREAPVNAIW 419

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-CKEDKGLAR 502
            GSGN M LDVL ++ +   + E + + LE+      +    + R  ++L   E +  AR
Sbjct: 420 EGSGNVMCLDVLRVMTREREVAEAVLADLERQTRELPECADALTRIRVTLQAPEAESYAR 479

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              E++AL ++A AL        A +F + R        +  
Sbjct: 480 DAVEQLALVAAADALAPVHPGHAA-LFAQTRLAQRHSLMYGA 520


>gi|27380208|ref|NP_771737.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27353362|dbj|BAC50362.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 547

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 204/549 (37%), Positives = 307/549 (55%), Gaps = 9/549 (1%)

Query: 15  VHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQE 72
           + QPS  +    NQ PLF  ++ ++ D  LV  + AN  +   +EL   G++  S    +
Sbjct: 1   MTQPSFATHEVFNQSPLFWDVDLFAVDRPLVEAVKANGGAKAERELSEFGKHWGSAAMAD 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+AN NTP+L  +   G R D+VEFHPA+H L+  S H G+H S W    +P     A
Sbjct: 61  RGRVANENTPKLRTFDAKGNRRDQVEFHPAYHELMAHSAHAGVHNSTWTADGKP-AGDAA 119

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             IRAA+ Y+ +Q+E GHL   ++T AS+ AL T P +     P + ++ YDPT      
Sbjct: 120 EVIRAAKFYIASQVETGHLCPITMTRASVAALATQPDLLARVMPVLATKSYDPTFAPWWG 179

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + +G+G+TEK+GGTD+ A  ++  +  D  Y ++GHKWF+S+PM DAF++LAQ +  
Sbjct: 180 KRGMTLGIGMTEKQGGTDVRANMTRAVRDGDA-YRITGHKWFMSAPMCDAFLVLAQADEG 238

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF +PR   DGS N + +QRLK+K+GNRSNA+ E+EF+  +   +G+       +  M
Sbjct: 239 LTCFFMPRFAPDGSVNAIQFQRLKDKLGNRSNASSEVEFAGAYAQAVGEAGKGIRTIIQM 298

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L   D AI S   MR  LA A+H+AR R V    L DQP+M+  ++D+AL + A+ AL
Sbjct: 299 VQLTRQDCAIASTGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLSDMALHVEASVAL 358

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             RL  +FD     + EAAY R++ P  KYW CK AP+ + EAMEC+GG+GY+E+  +AR
Sbjct: 359 VMRLCRAFDRTPHDAAEAAYMRLLTPAIKYWTCKSAPSFLYEAMECLGGNGYVEDGILAR 418

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDS 490
           HYRESP N+I  GSGN M LDVL  L +       +  +L  +        + +  +  +
Sbjct: 419 HYRESPVNAIWEGSGNVMCLDVLRALSREPEAAMAVLQSLAAETKGLPGAGEAVAFIGKT 478

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH-GRF 549
                + + +AR   EK+AL ++AAAL        A++F   R      S +  +     
Sbjct: 479 FRRA-DGERVARLAVEKLALLAAAAALNGVSPRH-AELFAATRLATTHASMYGAVELESG 536

Query: 550 NAAHIIDSL 558
           +   +++  
Sbjct: 537 DVRALLERA 545


>gi|239932731|ref|ZP_04689684.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 481

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 182/472 (38%), Positives = 257/472 (54%), Gaps = 7/472 (1%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           H    +    NQP      +A     LL  L         ++L  LG    S   QE + 
Sbjct: 15  HGGHATHDVANQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSE 74

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN + P+L  +   G R D+VEFHP+WH L+R ++ +GL  + W        R  AH  
Sbjct: 75  QANRHEPELRTHDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVA 129

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R A   +    +AGH    S+T A++  L   P + K + P + SREY+P  + P +K  
Sbjct: 130 RTAGGLVWGHTDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRG 189

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           +  G+G+TEK+GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + 
Sbjct: 190 LLAGMGMTEKQGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLS 249

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M  
Sbjct: 250 CFLVPRVLPDGTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVN 309

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  +MS + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ 
Sbjct: 310 CTRLDCVMMSAALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTL 369

Query: 375 RLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RLA + D A +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RH
Sbjct: 370 RLAGAADRAVRGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRH 429

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           YRE+P  SI  GSGN   LDVL  L +     + L   L    G+  +    
Sbjct: 430 YREAPLLSIWEGSGNVNALDVLRALGRDPATAQALLDELALSRGADARLDAA 481


>gi|254520907|ref|ZP_05132962.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14]
 gi|219718498|gb|EED37023.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14]
          Length = 545

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 179/542 (33%), Positives = 273/542 (50%), Gaps = 10/542 (1%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARM 76
           P ++   LNQPP F G + ++ D  L+  +           L + G          L   
Sbjct: 11  PFETHVVLNQPPPFAGRHLWTDDVALMEAVQREGAGGFAPRLAVYGALAG-DELYRLGFD 69

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN + P+L  +   G R D VEFHPA+H L+  +   G+    W        +  AH  R
Sbjct: 70  ANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKRHGVAGLSWHEP-----QPGAHVAR 124

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA  YL  Q EAG     ++T A++  L   P +  +W+ K  +  YDP +     K  +
Sbjct: 125 AALSYLHHQAEAGTSCPLTMTHAAVAVLSPHPHL-AEWSRKAAAPVYDPRDVPVADKAGI 183

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++LAQ  G + C 
Sbjct: 184 TLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGLTCL 243

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR L DG  N     RLK+K+G+ +NA+ E+EF     + +G+       +  M ++ 
Sbjct: 244 LMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMVMMT 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + + + MR++LA+A+H+AR R   G +L+D P+M   +AD+AL+  AAT LS R+
Sbjct: 304 RLDCMLGAAAEMRMALAQALHHARHRRTFGTLLVDHPLMANVLADLALESEAATVLSMRI 363

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D A     EAA AR+   + KYW CK A A + EA EC+GG+GY+EE  + R YR+
Sbjct: 364 ARAVDRAGVDGNEAALARLGTALGKYWVCKRAAAFVNEAQECLGGAGYVEESMLPRLYRQ 423

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P NSI  GSGN   LDVL  L +       L   L   +     +    L+   +    
Sbjct: 424 APLNSIWEGSGNIQCLDVLRALAREPEAMVALRGELAA-VADRDARYAAALQRWAAAPPP 482

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           ++  AR   E+ AL   AA       + IA+ F+ +R           L    + + ++ 
Sbjct: 483 EESQARMFCERTALLLQAAL-LLRARSPIAEAFVRSRLQGEHGLAFGTLPAGLDVSGMLA 541

Query: 557 SL 558
             
Sbjct: 542 RA 543


>gi|190575394|ref|YP_001973239.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190013316|emb|CAQ46950.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 545

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 181/544 (33%), Positives = 275/544 (50%), Gaps = 10/544 (1%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELA 74
           + P ++   LNQPP F G   ++ D  L   +       +   L + G          L 
Sbjct: 9   NAPFETHVVLNQPPPFAGRQLWTDDVALAEAVHREGAGALAPRLAVYGALAG-DELYRLG 67

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             AN + P+L  +   G R D VEFHPA+H L+  +   G+    W        +  AH 
Sbjct: 68  FDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMSAAKQHGVAGLSWHEP-----QPGAHV 122

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            RAA  YL  Q EAG     ++T A++  L + P +  +WA K  +  YDP +     K 
Sbjct: 123 ARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPRDVPVADKN 181

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + +G+G+TEK+GG+D+ A +++ + I    Y L GHKWF S+PM D F++LAQ  G + 
Sbjct: 182 GITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGLT 241

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           C L+PR L DG  N     RLK+K+G+ SNA+ E+EF     + +G+       +  M +
Sbjct: 242 CLLMPRRLADGDRNAFRLMRLKDKLGDWSNASSEVEFCGAQAWRVGEEGRGVATIIGMVM 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  LD  + + + MR++LA+A+H+AR R   G +L++  +M   +AD+AL+  AAT L+ 
Sbjct: 302 MTRLDCMLGAAAEMRMALAQALHHARHRRTFGKLLVEHSLMTNVLADLALESEAATVLAM 361

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A + D A   + EAA AR+   + KYW CK APA + EA EC+GG+GY+EE  + R Y
Sbjct: 362 RIARAVDRAGVDANEAAMARLGTALGKYWLCKRAPAFVNEAQECLGGAGYVEESMLPRLY 421

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++P NSI  GSGN   LDVL  L +       L   L   +     +    L+   +  
Sbjct: 422 RQAPLNSIWEGSGNIQCLDVLRALAREPEAMAALRGELA-SVADRDARYAAALQRWAAAP 480

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
             ++  AR   E+ AL   AA L RA    +A+ F+ +R           L        +
Sbjct: 481 PPEEAQARLFCERTALLLQAALLLRARSP-MAEAFVRSRLEGEHGLAFGTLPAGLELTAM 539

Query: 555 IDSL 558
           +   
Sbjct: 540 LARA 543


>gi|17544840|ref|NP_518242.1| oxidoreductase flavoprotein FAD [Ralstonia solanacearum GMI1000]
 gi|17427129|emb|CAD13649.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 557

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 186/542 (34%), Positives = 283/542 (52%), Gaps = 20/542 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N ++SD+ L   +       H + L   GE + S      A  AN 
Sbjct: 6   THRVFNQVPDLAHFNPFTSDATLQGALGRLGGGWHADALRAFGETLGSPRTLAWAAEANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D V F PAWHALL      GL    +        R  A   R A 
Sbjct: 66  YPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFAEP-----RAGAWAARTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ +G
Sbjct: 121 YFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTAILVG 180

Query: 200 LGLTEKRGGTDIAAITSQGQK--------ISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
           +G+TEK+GG+D+ + T+                 Y L+GHKWF S+PM DA +++A++  
Sbjct: 181 MGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVARMGA 240

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR  +DG  N +  QRLK+K+GN SNA+ E+EF    G L+G+       
Sbjct: 241 EDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGRGIPT 300

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  A
Sbjct: 301 ILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQA 360

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE 
Sbjct: 361 ATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEEG 420

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSG-KKVITI 486
            +AR YRE+P NSI  GSGN M LDVL  + +  +   +L   + E+  G    +  +  
Sbjct: 421 PMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLVQDIGERARGHRAVRAELAA 480

Query: 487 LRDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           L+  +    +  +  AR + + +AL + AA +      D A+ F+ +RF          L
Sbjct: 481 LQAMLHQSGDIQEASARRIAQGLALTAQAALMLAHAHADDAERFIASRFHHQHGRVFGTL 540

Query: 546 HG 547
            G
Sbjct: 541 EG 542


>gi|121609177|ref|YP_996984.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553817|gb|ABM57966.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 568

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 178/545 (32%), Positives = 259/545 (47%), Gaps = 17/545 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            +    NQ     G +A+  D++L + I             LG  V     QELAR+AN 
Sbjct: 18  STHQVANQAQPASGYDAFGGDAVLRSAIEREAPWAASRCAALGAVVGDENVQELARLANR 77

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP+L  +   G R D VEFHP+WHAL+  +    +    W         K  H  RA  
Sbjct: 78  HTPELKTHDRFGNRIDWVEFHPSWHALMSLAWQHEVPNLTWR-----TTEKGGHFARAVL 132

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G      +  AS       P +   W  K     Y+ + +    K +V IG
Sbjct: 133 SYLWNQVEQGTACPTGMAYASHAGFEAEPAL-AIWKEKSKGTTYEFSRREVGDKPAVVIG 191

Query: 200 LGLTEKRGGTDIAAITSQGQ--KISD------GIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
             +TEK+GG+D+    +  +     D        Y L+GHKWF S P SD F  LA+V G
Sbjct: 192 YAMTEKQGGSDLRQTRTTARFSHSGDYHGAMAHWYELTGHKWFCSVPQSDGFFTLAKVNG 251

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V CF +PR L DGS N    QRLK+K GN SNA+ E+E++ T    +G+       +  
Sbjct: 252 GVTCFFLPRTLPDGSYNRFFVQRLKDKAGNESNASSEVEYAGTLAIRVGEEGRGIREILS 311

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L  LD A+ S   MR +L  A+ +   R   G  L D+P+M   +AD+A+++ AAT 
Sbjct: 312 HAHLTRLDFAVGSAGLMRQALTLALRHTTTRSAFGTPLADRPMMSNVLADMAVEVEAATL 371

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ R+A + D       E   ARI  P  K++ C  AP++  EA++C GG+G+IEE  +A
Sbjct: 372 MALRVAKATDLMACSEHEKLLARIATPAAKFFNCSRAPSIAYEALQCHGGNGFIEENPMA 431

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL--RD 489
           R YRE+P NS+  G+ N M +DV   + K     E LF  L+       +  + +   + 
Sbjct: 432 RLYREAPLNSVWEGTANMMCMDVRRAMTKDPRTVEALFDELQPLANQDARFDVQVRHTKR 491

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHSTHCMLHGR 548
            +    +D+ LAR +TE +A     A L R    ++ADVFL  R    +  S +  L   
Sbjct: 492 LVHEAVKDEFLARPMTEAVARVLQGAELIRHSSREVADVFLGTRSPGGSWGSHYGTLAAP 551

Query: 549 FNAAH 553
              A 
Sbjct: 552 VTQAA 556


>gi|209963362|ref|YP_002296277.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209956828|gb|ACI97464.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 540

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 191/542 (35%), Positives = 274/542 (50%), Gaps = 19/542 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVL-SCTAQELARMAN 78
           ++    NQPP   G+N +S D+ LV  +      VH+           +    +    AN
Sbjct: 11  ETHEVFNQPPPLEGLNLFSGDTALVEAVRKAGGGVHEARLAALGARAGTAEVIDWGVEAN 70

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L ++   G R D+V FHPA+H L+R  +  G     WD S         H   AA
Sbjct: 71  RRIPELDSFDRYGRRIDEVRFHPAYHELMRFGLDSGFAAIAWDGS------PAGHVGHAA 124

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            LYL  Q ++G +   ++T A++ AL   P V  +W P+I +  YDP  +   +K  V I
Sbjct: 125 ILYLSGQADSGTICPMTMTYAAVPALRVEPAVAAEWVPRILAGRYDPAVRPAGEKAGVTI 184

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+ +TEK+GG+D+ A T++      +G Y L+GHKWF S+PM DAF+ LA  EG + CFL
Sbjct: 185 GMAMTEKQGGSDVRANTTRAVPTGQEGWYSLTGHKWFCSAPMCDAFLTLAYAEGGLTCFL 244

Query: 258 VPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           VPR L DG  N G    RLK+K+G+RSNA+ E+E+       +G        +  M    
Sbjct: 245 VPRWLPDGERNPGFRVMRLKDKLGDRSNASSEIEYHGALARRVGPEGRGVATIIQMVQHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S   MR ++A+A+ +   R      L+DQP M   +AD+A++  AATAL FRL
Sbjct: 305 RLDCVVGSAQIMRGAVAQALWHTANRSAFQRRLVDQPAMAAVLADLAVETEAATALGFRL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +FD           AR++ P+ KYW CK  P V+ EAMEC+GG+GYIE   + R +R+
Sbjct: 365 ARAFDAEDPV------ARLLTPVAKYWVCKRTPGVVYEAMECLGGAGYIETGPMGRLFRQ 418

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           SP N+I  GSGN + LDVL  + +       L   L    G +      I    I L + 
Sbjct: 419 SPLNAIWEGSGNVIALDVLRAMAREPESAAALKDYLTAQAGRNPDYDDWI--AGIDLRRV 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  AR L E++ALA+ AA L     N +AD F   R      + +       +   IID
Sbjct: 477 TEATARMLVERLALAAQAAVLLEW-DNPLADTFCSLRL-RARGAMYGAFDATIDTRAIID 534

Query: 557 SL 558
             
Sbjct: 535 RA 536


>gi|149201829|ref|ZP_01878803.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149144877|gb|EDM32906.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 543

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 180/539 (33%), Positives = 268/539 (49%), Gaps = 13/539 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQP     ++ ++ D  L    A       + L   G  + + T +   R AN +
Sbjct: 12  THEVTNQPASRGDLDLWADDPGLQ-THATAAGADPETLAAYGARIGTETLRSAGRAANRH 70

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +  GG R D+V FHP +H L+R  I  G     W+ +      K  H   AA +
Sbjct: 71  PPELVLFDAGGRRLDEVRFHPTYHDLMRVGIGAGYAAIPWEGA------KGGHVTHAAMV 124

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL +Q+E G     ++T A++ AL +   +  DW PK+ +R YDP  K   +K    +G+
Sbjct: 125 YLTSQVEPGVCCPMTMTYAAVPALRSDKALFADWVPKLTARAYDPGAKPLARKPGATLGM 184

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+DI A  +         Y L GHKWF S+PMSD F+ LAQ    + CFLVPR
Sbjct: 185 AMTEKQGGSDIRANATTATPEG-AFYRLFGHKWFCSAPMSDGFLTLAQAPEGLTCFLVPR 243

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            LE G+ N +  QRLK+K+GNR+NA+ E+E+     + LGD       + +M     LD+
Sbjct: 244 WLE-GARNEIQIQRLKDKLGNRANASAEIEYHGAIAYRLGDEGAGICTILEMVHHTRLDT 302

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+     MR +L  A H+A  R V    LIDQP+M+  +AD+ALD     AL   +A +F
Sbjct: 303 AMAPAGLMRAALDHARHWAHHRSVFQRQLIDQPLMRAVLADLALDWEGTLALGLHVARAF 362

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E A+AR+   + K+   K+ P V+ EAME +GG GYIE+  +   YRE+P N
Sbjct: 363 D--GRSPAERAFARLGVALAKFLGNKLCPGVVYEAMEAMGGMGYIEDTPLPLLYREAPLN 420

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKG 499
           SI  GS N + LD+L  L K     E L + L    G   +    +     +  K  ++ 
Sbjct: 421 SIWEGSANVICLDILRTLRKEPLAGEVLTAELASVAGQDRRFDAALKAHMQTFPKLPEEA 480

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            AR+  E +A   +A+ L R   + +A  ++  R  D        + G  +   I+  L
Sbjct: 481 QARWYAESLATLLTASVLMRHAPDAVAQGYIATRLSDPRGRVAGAI-GTLDTGPILARL 538


>gi|309811482|ref|ZP_07705264.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308434533|gb|EFP58383.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 559

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 187/538 (34%), Positives = 278/538 (51%), Gaps = 22/538 (4%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE----LELLGEYVLSCTAQELARMANYN 80
            NQ  +  G +A  +D  L    + F S  H +    L  LG    S  A+E    AN  
Sbjct: 10  TNQADVMAGFDAVDADEALKDAASAFASHEHADVLGPLRELGVMAGSEEAREHGMAANTF 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+  A    G R D VEFHP+WH L+RR +  GL  + W  +        AH  RAA  
Sbjct: 70  TPRHRAVDRFGARTDAVEFHPSWHWLMRRGVEFGLAGAPWQDASA-----DAHLRRAAGF 124

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              + +E GH+   ++T A++ AL     + + +A  + +  Y+P +     K  +  G+
Sbjct: 125 ITWSGVEPGHVCPLTMTHAAVPALRADEALTQRYADGLAASVYEPGDLPAASKEGLLAGM 184

Query: 201 GLTEKRGGTDIAAITSQGQK-----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           G+TEK+GG+D+    ++            +Y L GHKWF S+P +D F++LAQ  G + C
Sbjct: 185 GMTEKQGGSDVRTNVTEATPSGFDDDGAAVYSLRGHKWFTSAPTNDLFLVLAQAPGGLTC 244

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           F+VPR+  DG+ N L   RLK+K+GNRSNA+ ELEF + +   LGD       + +M   
Sbjct: 245 FVVPRVHPDGTRNALRIVRLKDKLGNRSNASSELEFHDAYATRLGDEGAGVRTIIEMVSA 304

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             LD  + S   MR + +EA  Y  RRH  GG+L D+P M+  +AD+A++  AATAL  R
Sbjct: 305 TRLDCVLGSAGLMRRATSEAAWYTARRHAFGGVLADKPAMQNVLADLAIESEAATALGMR 364

Query: 376 LANSFDEAKSRS----EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LA S D  +S       E A+ R   P+ K+W CK  P  +AEA+EC+GG+GY+EE  + 
Sbjct: 365 LAASVDRIESGDPGSEHERAFRRFALPLAKFWVCKRTPMHVAEALECLGGNGYVEESGMP 424

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT---ILR 488
             +RESP NSI  GSG+   LDVL  L +    FE     L+   G      +    +L 
Sbjct: 425 LLFRESPLNSIWEGSGSVNALDVLRALTRSPEAFEAFSRELDVTRGDHPGLDVATKQVLA 484

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           D +SL  +D +  AR ++ ++A+   A+ L R+  + ++D F+ +R           L
Sbjct: 485 DVVSLTPDDAEYRARDISARMAVVLQASLLLRSAPSSVSDAFIASRVQGEWGGVFGTL 542


>gi|24115540|ref|NP_710050.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
 gi|24054870|gb|AAN45757.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
          Length = 460

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 169/442 (38%), Positives = 245/442 (55%), Gaps = 9/442 (2%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLS 67
            +  + VH    +    NQP      N Y SD  L   +    +    + L  +G+ + +
Sbjct: 1   MMEGDTVHWQ--THTIFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGT 58

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + EL R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+      
Sbjct: 59  AESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED---- 114

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            R  A   RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD  
Sbjct: 115 ARSGAFVARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSH 174

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                QK  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++L
Sbjct: 175 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVL 234

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG      
Sbjct: 235 AQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGI 294

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  M  +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +
Sbjct: 295 RLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQL 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              TAL FRLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY E
Sbjct: 355 EGQTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCE 413

Query: 427 ERSIARHYRESPANSILLGSGN 448
           E  + R YRE P NSI  GSG 
Sbjct: 414 ESELPRLYREMPVNSIWEGSGG 435


>gi|75676196|ref|YP_318617.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74421066|gb|ABA05265.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 546

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 200/533 (37%), Positives = 292/533 (54%), Gaps = 7/533 (1%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           + QP  +   LNQ P F  ++ ++ D  L   +A       ++ ++  G++  S      
Sbjct: 1   MTQPFRTHEVLNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDDMKAFGKHWGSSAMAAR 60

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+   +   G R D+VEFHP++H L+  S H GLH S W     P     A 
Sbjct: 61  GRLANENPPKPRLFDARGNRRDEVEFHPSYHELMAHSAHAGLHNSTWTADGRPAAG-AAE 119

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +RAA+ Y+ AQ+E GHL   ++T AS+  L   P +  +  P I +R YDP       K
Sbjct: 120 VVRAAKFYMAAQVETGHLCPITMTRASVATLAAQPDLLAETMPVIATRSYDPLFAPWRTK 179

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             + +G+G+TEK+GGTD+ A  ++  +  D  Y ++GHKWF+S+PM DAF++LAQ EG +
Sbjct: 180 RGMTLGMGMTEKQGGTDVRANQTRAVRDGDA-YRVTGHKWFMSAPMCDAFLVLAQAEGGL 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR   DGS N +  QRLK+K+GNRSNA+ E+EF   +   +G+       +  M 
Sbjct: 239 TCFFMPRFRPDGSVNAIHLQRLKDKLGNRSNASAEVEFIEAYARRVGEEGKGIRAILQMV 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L   D AI S   MR  LA A+H+AR R V    L+DQP+M+  +AD+AL + A+ AL 
Sbjct: 299 QLTRQDCAIASAGLMRSGLAHALHHARHRSVFRKRLVDQPLMQAVLADMALQVEASVALV 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RL  +FDEA S  + A + R++ P  KYW CK AP  + EAMEC+GG+GY+EE  +ARH
Sbjct: 359 MRLCRAFDEAPSDQKAAVWMRLLTPAVKYWICKSAPGFLYEAMECLGGNGYVEEGILARH 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSI 491
           YRE+P N+I  GSGN + LDVL  L +  +    +   L  D      G +  + L  ++
Sbjct: 419 YREAPVNAIWEGSGNVICLDVLRSLARDGDAAVAVLDDLAADTRDLPGGAEAGSFLARTV 478

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                ++  AR   E +A  ++AAAL R   +  A +F   R      S    
Sbjct: 479 RRPDGERA-ARQAVETLAQLAAAAALSRTAPDQAA-LFAATRLGCPHGSLFGT 529


>gi|299068312|emb|CBJ39536.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 557

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 186/542 (34%), Positives = 283/542 (52%), Gaps = 20/542 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQ P     N ++SD+ L   +       H + L   GE + +      A  AN 
Sbjct: 6   THRVFNQVPDLAHFNPFTSDATLQGALDRLGGGWHADALRAFGETLGAPQTLAWAAEANR 65

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+LH +   GER D V F PAWHALL      GL    +        R  A   R A 
Sbjct: 66  YPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFAEP-----RAGAWAARTAG 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ AQ+E+G L   ++T AS+  L     +  D AP++++RE+D  +    QKT++ IG
Sbjct: 121 YFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTAILIG 180

Query: 200 LGLTEKRGGTDIAAITSQGQK--------ISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
           +G+TEK+GG+D+ + T+                 Y L+GHKWF S+PM DA +++A++  
Sbjct: 181 MGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVARMGA 240

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G + CF VPR  +DG  N +  QRLK+K+GN SNA+ E+EF    G L+G+       
Sbjct: 241 EDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGRGIPT 300

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M     LD  I S + +R +L +A+H+AR R   G +L DQP+M+  +AD+AL+  A
Sbjct: 301 ILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQA 360

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AT L   L ++F+ A++    AA+ RI+ P  K+W CK A     EAME  GG+GY+EE 
Sbjct: 361 ATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEEG 420

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSG-KKVITI 486
            +AR YRE+P NSI  GSGN M LDVL  + +  +   +L   + E+  G    +  +  
Sbjct: 421 PMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLVQDIGERARGHRAVRAELAA 480

Query: 487 LRDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           L+  +    +  +  AR + + +AL + AA +      D A+ F+ +RF          L
Sbjct: 481 LQAMLHQSGDIQEASARRIAQGVALTAQAALMLAHAHADDAERFIASRFHHQHGRVFGTL 540

Query: 546 HG 547
            G
Sbjct: 541 QG 542


>gi|264676236|ref|YP_003276142.1| acyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
 gi|262206748|gb|ACY30846.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 558

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 172/561 (30%), Positives = 280/561 (49%), Gaps = 26/561 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELAR 75
           Q  ++    NQ     G+N   +D+ L  ++           L    + +      E A 
Sbjct: 2   QALETHDVFNQFDELTGINLLQADAALQEVLQRQQAQSFAPALNRFAQQLGEKQNWEHAE 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN +TP+L  +   G   D VEFHP+WH L+      GL    ++        +     
Sbjct: 62  LANRHTPELQRFDARGRVLDAVEFHPSWHRLMELYRKQGLISLPFESPS-----RGRWSA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+E G L   ++T+A++  L   P++      ++FS EYD  +    QK S
Sbjct: 117 WAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLDQKKS 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           + IG+G+TEK+GG+D+ A T+  + +      G Y L GHKWF S+PM DA +++A++  
Sbjct: 177 IWIGMGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVARMAT 236

Query: 251 -----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+E  + +G L+G+    
Sbjct: 237 ASGELGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGEEGRG 296

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD+AL+
Sbjct: 297 IPTIIEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLADLALE 356

Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A+  L+  LA +++ EA+      A+ RIM P  K+W CK +  +  EAME  GG+GY
Sbjct: 357 SEASMQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           +++  +AR +RE+P NSI  GSGN M LDVL  + +       L   L     ++ + ++
Sbjct: 417 VQDSIVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLLQDLGD--MAADQPLL 474

Query: 485 TILRDSISL-----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           T +  S++       +  +  AR L + + L + A  L+R     +AD F+  R      
Sbjct: 475 TAMAQSLAKRLSDSPEALEPQARRLVQDLCLLAQACLLHRHAPEHMADGFIHTRLGAQNG 534

Query: 540 S--THCMLHGRFNAAHIIDSL 558
           +           + A +++  
Sbjct: 535 AMVVGAFDPAGLDIAAVLERA 555


>gi|299533428|ref|ZP_07046810.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298718634|gb|EFI59609.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 558

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 173/561 (30%), Positives = 281/561 (50%), Gaps = 26/561 (4%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELAR 75
           Q  D+    NQ     G+N   +D+ L  ++           L+   + +      E A 
Sbjct: 2   QALDTHDVFNQFDELTGINLLQADAALQEVLQRQQAQSFVPALKRFAQQLGEKHNWEHAE 61

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +AN +TP+L  +   G   D VEFHP+WH L+      GL    ++        +     
Sbjct: 62  LANRHTPELQRFDARGRVQDAVEFHPSWHRLMELYRKQGLISLPFESPS-----RGRWSA 116

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA  YL  Q+E G L   ++T+A++  L   P++      ++FS EYD  +    QK S
Sbjct: 117 WAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLDQKKS 176

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250
           + IG+G+TEK+GG+D+ A T+  + +      G Y L GHKWF S+PM DA +++A++  
Sbjct: 177 IWIGMGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVARMAT 236

Query: 251 -----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                G   CF VPR   DGS N +  QRLK+K+GNRSN++ E+E  + +G L+G+    
Sbjct: 237 PSGELGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGEEGRG 296

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     L+  + S + +R +  ++I YAR+R   G  L DQP+M   +AD+AL+
Sbjct: 297 IPTIIEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLADLALE 356

Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A+  L+  LA +++ EA+      A+ RIM P  K+W CK +  +  EAME  GG+GY
Sbjct: 357 SEASMQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFGGNGY 416

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           +++  +AR +RE+P NSI  GSGN M LDVL  + +       L   L     ++ + ++
Sbjct: 417 VQDSIVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLLQDLGD--MAADQPLL 474

Query: 485 TILRDSISL-----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           T +  S++       +  +  AR L + + L + A  L+R     +AD F+  R      
Sbjct: 475 TAMAQSLAKRLSGSPEALEPQARRLVQDLCLLAQACLLHRHAPAHMADGFIHTRLGAQNG 534

Query: 540 S--THCMLHGRFNAAHIIDSL 558
           +           + A +++  
Sbjct: 535 AMVVGAFDPAGLDIAAVLERA 555


>gi|220921092|ref|YP_002496393.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945698|gb|ACL56090.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 538

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 213/541 (39%), Positives = 300/541 (55%), Gaps = 8/541 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +   LNQ P F+ +N  ++D+ L   + AN        L   G    S    +L R+AN
Sbjct: 2   HTHDVLNQSPPFVDVNLVAADAALRGALGANGADPEDPALLAFGAAWGSAERLDLGRLAN 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  + P G R D VEFHPA+HAL+  SI +GLH S+WD    P+   + H  RAA
Sbjct: 62  ENPPRLRTHDPRGRRADIVEFHPAYHALMGASIAEGLHASVWDGPAPPLPAGRGHLARAA 121

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           RL+++A +E+GHL   ++TSA++ AL  +P     W P+I +R YDP      +K  V +
Sbjct: 122 RLHIVAGVESGHLCPMTMTSAAVAALAASPDHLAAWWPRITARRYDPRFLPWFEKAGVTL 181

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+G+TEK+GGTD+ A +++ +      Y L+GHKWF S+PM DAF++LAQ    + CFLV
Sbjct: 182 GMGMTEKQGGTDVRANSTRAEPTGADTYALTGHKWFFSAPMCDAFLVLAQAPAGLACFLV 241

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR   DGS N L  QRLK+K+GNRSNA+ E+EF   FG+ +G+       +  M  L  L
Sbjct: 242 PRHRPDGSVNALELQRLKDKLGNRSNASSEVEFDRAFGWRIGEEGRGIRTILAMVQLTRL 301

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D A+ S    R++LA A+H+A+ R V    L DQP M+  +AD+AL + A TAL  RLA 
Sbjct: 302 DCAVASSGLARMALALALHHAQHRSVFQKRLADQPAMRGVLADLALAVEAQTALVMRLAA 361

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           SFD       E A AR++ P  KY  CK APA++ EAMEC+GG+GY+EE  + R YRE+P
Sbjct: 362 SFDRG-----EGARARLLTPAVKYAVCKAAPALVYEAMECLGGNGYVEESPLPRLYREAP 416

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE-QDLGSSGKKVITILRDSISLCKED 497
            N+I  GSGN M LDVL    +       L + L  +  G  G +             + 
Sbjct: 417 VNAIWEGSGNVMALDVLRAAARAPEEARSLLAELATEARGLPGAREAARDVAEALEAPDA 476

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  ARF T ++A  + AAAL  +    IA+ + E R     H           A  +++ 
Sbjct: 477 EAQARFATGRLAALAGAAALATSAPPAIAEAYAETRL-RREHGFFGCRDLGPAAGLLLER 535

Query: 558 L 558
            
Sbjct: 536 A 536


>gi|291441087|ref|ZP_06580477.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343982|gb|EFE70938.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 467

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 180/458 (39%), Positives = 253/458 (55%), Gaps = 7/458 (1%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           H    +    NQP      +A     LL  L         ++L  LG    S   QE + 
Sbjct: 15  HGGHATHDVANQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSE 74

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN + P+L  +   G R D+VEFHP+WH L+R ++ +GL  + W        R  AH  
Sbjct: 75  QANRHEPELRTHDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVA 129

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R A   +    +AGH    S+T A++  L   P + K + P + SREY+P  + P +K  
Sbjct: 130 RTAGGLVWGHTDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRG 189

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           +  G+G+TEK+GG+D+   T+     ++ G+Y L GHKWF S+PM D F++LAQ  G + 
Sbjct: 190 LLAGMGMTEKQGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLS 249

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR+L DG+ N    QRLK+K+GNRSNA+ E EF  T  +L+G        + +M  
Sbjct: 250 CFLVPRVLPDGTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVN 309

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD  +MS + MR +L EA H+ R R   G  L+DQP+M+  +AD+AL+  AAT L+ 
Sbjct: 310 CTRLDCVMMSAALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTL 369

Query: 375 RLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           RLA + D A +  + EAA+ RI   + KYW  K  PA  AEA+EC+GG+GY+EE  + RH
Sbjct: 370 RLAGAADRAVRGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRH 429

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
           YRE+P  SI  GSGN   LDVL  L +     + L   
Sbjct: 430 YREAPLLSIWEGSGNVNALDVLRALGRDPATAQALLDE 467


>gi|120608852|ref|YP_968530.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120587316|gb|ABM30756.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 555

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 182/547 (33%), Positives = 277/547 (50%), Gaps = 21/547 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ       +  ++D+ L   +     +     L      + S     LA +AN 
Sbjct: 5   THEVFNQYAELADYDLLATDAALQEALQRAGAAHALPALGDYARRLGSAGTHALAELANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP LH +   G R D+VEFHPAW AL+     +GL    +D       R       AA 
Sbjct: 65  HTPILHRFDSRGRRADRVEFHPAWDALMALYRGEGLVSMPFDSD-----RPGRWSAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T A++  L   P +      ++ SR +DP      +K  + +G
Sbjct: 120 FYLHGQVEQGTLCPATMTQAAIPLLRKEPALWARLGDRLHSRTHDPREAPAHEKAGIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+P SDA +++A+    G  
Sbjct: 180 MGMTEKQGGSDVRANTTVATPLGAGGRGGEYRLRGHKWFFSTPQSDAHLVVARTGEGGPF 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR L+DG+ NG+  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 240 ACFYVPRRLQDGTLNGVHVQRLKDKVGNRSNASAEVEFHDAWGVLMGEEGRGIPTIIEMA 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+    S + +R +  +AI YARRRH  G  L +QP+M+  +AD+AL+  AA AL 
Sbjct: 300 TYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKALAEQPLMRTVLADLALESEAALALL 359

Query: 374 FRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            RLA +F+   +  +   + A+ R+M P  K+W CK    +  EAME  GG+GY++E  +
Sbjct: 360 MRLAEAFERDADGTATPADRAWKRVMTPAAKFWVCKRGVEMAGEAMEVFGGNGYVQEGVM 419

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488
           AR + E+P NSI  GSGN M LDVL  L + T     L            +    +  L+
Sbjct: 420 ARLFLEAPVNSIWEGSGNVMCLDVLRALARDTEAAHALLEEFAPAAQGEPRIGATLRELQ 479

Query: 489 DSISL-CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
             ++L  +E +G+ R   +++ LA+ A  L R     +AD F+  R  D        + G
Sbjct: 480 ALLALPPQELEGMGRLAAQRLVLAAQACLLRRHAPAAVADAFIATRLGDAGG---GRVAG 536

Query: 548 RFNAAHI 554
             +A  I
Sbjct: 537 AIDARAI 543


>gi|119898590|ref|YP_933803.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119671003|emb|CAL94916.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 547

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 184/546 (33%), Positives = 280/546 (51%), Gaps = 12/546 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANY 79
           +    NQ    +  N ++ D  L   +A   +     EL+ +G  +       L  +AN 
Sbjct: 4   THEVANQVDALVDYNLFACDPALQNAVAAAGAAARMGELDAIGARLGHAEVLRLGDLANR 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           + PQLH +   G R D+VE+HPAW AL+R    DG+HCS W           AH  RAA 
Sbjct: 64  HPPQLHTHDACGRRVDRVEYHPAWDALMRLLYADGVHCSAWTEP-----GPGAHVARAAA 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +L  Q+EAG L   ++T A++  L   P +H   A ++ + +YD  +     K SV +G
Sbjct: 119 FFLHGQVEAGSLCPATMTFAAIPLLRREPALHAALAAQLGALDYDGRDLPAPSKRSVTVG 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +GLTEK+GG+D+ ++ +Q ++ + G Y L GHKWF S P  D  ++LA+ +    CF VP
Sbjct: 179 MGLTEKQGGSDLRSVATQARRAAGGEYLLVGHKWFYSVPACDGHLVLARGDDGPACFFVP 238

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG  N +  QRLK+K+GNRSNA+ E+EF +  G  +G+       + +M     LD
Sbjct: 239 RWRPDGERNAVRIQRLKDKLGNRSNASGEVEFHDALGIPVGEPGRGIAVLIEMAAQTRLD 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + MR +L EA+H+AR R   G  LI QP+M+  +AD+AL+  AAT L+  LA  
Sbjct: 299 CVLGSAALMRRALVEALHHARHRSAFGHPLIAQPLMRNVLADLALESEAATLLAIHLAAC 358

Query: 380 FDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            D       + +   A+ R++ P  K+W CK A A  AE ME  GG+GY+E+  + R  R
Sbjct: 359 ADAECAGGGTAARGRAWRRVLTPAAKFWICKRAIAFCAECMEVCGGNGYVEDGPMPRLLR 418

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISL 493
           E+P NSI  GSGN M LD+L  L +  +    L + L   +      +     L  +++ 
Sbjct: 419 EAPVNSIWEGSGNVMCLDLLRALAREQDAAAALLADLADAVDGDRRWRAACEELAATLNA 478

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
            ++D  LAR    ++ +   AA L R     +A  F  +R   +       L     AA 
Sbjct: 479 GRDDAWLARRGASRLVVLVQAALLRRHAPAAVAAAFAASRVYRHGDHGFGALQSADAAAP 538

Query: 554 IIDSLY 559
           +++  +
Sbjct: 539 LLERAW 544


>gi|317125027|ref|YP_004099139.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589115|gb|ADU48412.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 545

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 197/554 (35%), Positives = 290/554 (52%), Gaps = 26/554 (4%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMAN 78
            +    NQ   F+  +  S D  L   +  + +      L  LG    S  AQ+  R+A+
Sbjct: 2   STHEVTNQVEPFVDRDFLSEDRALAEAVGRWVAAEEVAPLGELGRLAGSPEAQDHGRLAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P L  +   G R D+VEFHP+WH L+ R++  GL    W       V + AH  RAA
Sbjct: 62  ANRPVLRTHDARGNRIDEVEFHPSWHWLMARAVGAGLTAEPWTAP----VGRGAHARRAA 117

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              + +++EAGH    S++ A+  AL     +   W PK+ SR YD   +   +K  V  
Sbjct: 118 GFMIWSRVEAGHGCPISMSYAAGPALRHDAELASRWLPKLASRTYDFGIRPLAEKAGVIA 177

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-----IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           G+G+TEK+GG+D+ A  +       G      Y L+GHKWFLS+PMSD F++LAQ    +
Sbjct: 178 GMGMTEKQGGSDVRANATTATLTPGGPLPGETYRLTGHKWFLSAPMSDVFLVLAQAPAGL 237

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            C +VPR LEDG+ N    QRLK+K+GN SNA+ E+EF  T+G  LGD       + +M 
Sbjct: 238 TCLVVPRALEDGTRNPFALQRLKDKLGNHSNASSEVEFDGTWGSRLGDEGRGVRTIIEMV 297

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               LD+ + S + MR ++  A+H+AR+R   G +L+DQP+M+  +AD+AL+  AAT L+
Sbjct: 298 GATRLDTVLGSTATMRDAVTRAVHHARQRTAFGRLLVDQPLMRNVLADLALEAEAATVLA 357

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA++FD       EA +ARI   + KYW CK    ++AEA+EC+GG+GY+EE  +AR 
Sbjct: 358 MRLAHAFDAG-----EADFARIGVAVGKYWVCKRTAPMVAEALECLGGNGYVEENVLARL 412

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           YRE+P NSI  GSGN   LDV+  + +     E L   L +  G S + +   + D++  
Sbjct: 413 YREAPLNSIWEGSGNVNALDVIRAISREPASLEALTKELHRVRGVS-RALDDHMDDAVQQ 471

Query: 494 C-------KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
                    E    AR   E +A+A  AA L       +A+ F+ +R       T   L 
Sbjct: 472 AHSLRPDSPEAAFTARSAVEGLAVALQAALLLEHSPT-VAEAFIASRIQGGHGHTFGTLP 530

Query: 547 GRFN--AAHIIDSL 558
                    ++D +
Sbjct: 531 VDLAGSVGPVLDRI 544


>gi|167717592|ref|ZP_02400828.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
          Length = 472

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 175/466 (37%), Positives = 255/466 (54%), Gaps = 14/466 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 12  TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 72  NRHAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 127 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 187 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 246

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 247 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 306

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 307 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 366

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 367 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 426

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +AR YRE+P NSI  GSGN M +DVL  +E+  +    LF      
Sbjct: 427 MARFYREAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDA 472


>gi|319786941|ref|YP_004146416.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465453|gb|ADV27185.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 544

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 180/545 (33%), Positives = 280/545 (51%), Gaps = 13/545 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMA 77
            ++    NQPP F   + +  D  L   +    +      L+  G          L   A
Sbjct: 6   FETHVVENQPPAFAPRDLWGDDLALREAVVRGGAGAFTARLQAYGALAG-DELYRLGFDA 64

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  +   G R D VEFHPA+H L+  +   G+    W           A   RA
Sbjct: 65  NRDRPRLRTHDAQGRRIDLVEFHPAYHRLMELAKAHGVAGLSWHEPV-----PGAQVARA 119

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q EAG     ++T A++  L   P + + WA    +  YDP +     KT + 
Sbjct: 120 ALAYLHHQAEAGTSCPLTMTHAAVPVLRQAPALAQ-WARLAAAPAYDPRDVPMAAKTGLT 178

Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
           +G+G+TEK+GG+D+   T+    +     + L GHKWF S+PMSD F++LAQ    +GCF
Sbjct: 179 LGMGMTEKQGGSDVRGNTTTATPLPGREGWRLVGHKWFFSAPMSDGFLVLAQTPDGLGCF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L+PR L DGS N     RLK+K+G+ SNA+ E+EF +   + +G+       +  M +L 
Sbjct: 239 LLPRRLPDGSKNAFRLMRLKDKLGDWSNASSEVEFCDALAWPVGEPGRGVATIIPMVMLT 298

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + + +  R+++A+A+H+AR R   G +L+  P+M   +AD+A++  AAT L+  +
Sbjct: 299 RLDCMLAAAAQARMAMAQAVHHARHRVTFGRVLVGHPLMANVLADLAIESEAATVLALDV 358

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + +  +  +  AAYAR+   + KYW C+ APA++ EA EC+GG+GY+EE  + R YR+
Sbjct: 359 AAAVEAGQGDAGAAAYARVATAVGKYWLCRRAPALVNEAQECLGGAGYVEESLLPRLYRQ 418

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISL 493
           +P NSI  GSGN   LDVL  L +   + + L   LE+  G      ++   I R   + 
Sbjct: 419 APLNSIWEGSGNIQCLDVLRALAREPQVAQALRGALERAAGFDPVLAREAEAIGRQLAAP 478

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
             E +  AR+L E+IAL    AAL+ AG   +A+ F+ +R           L    + A 
Sbjct: 479 AAELEVRARYLVERIALVLQGAALHAAGSP-VAEAFVRSRLDGAHGLAMGTLPVDVDFAS 537

Query: 554 IIDSL 558
           +++  
Sbjct: 538 VLERA 542


>gi|326436924|gb|EGD82494.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 706

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 183/555 (32%), Positives = 286/555 (51%), Gaps = 21/555 (3%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-HKELELLGEYVLSCTAQELARM 76
           P      LNQ P      A+ SD +L + ++ + +    +++  +G+   S    ELAR 
Sbjct: 28  PPPQSRVLNQVPALENFAAFESDPILQSCVSFYGADFGTEQISYVGKLAGSQHVAELARD 87

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN N P  H++   G R D V++HPA+H +++  I   +    W  +     ++ +   R
Sbjct: 88  ANENIPVFHSHDRFGNRIDFVKYHPAYHEIMKLGIEAEIPSYSWRNA----DKRGSAVAR 143

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK--DWAPKIFSREYDPTNKAPMQK 193
           +A  YLM Q E+G     ++T A + AL   T       D+  K  + EYDP N    +K
Sbjct: 144 SALGYLMYQAESGTQCPQTMTYACVPALKHMTDEQRSVCDFLTKAITPEYDPRNVPATEK 203

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS------DGIYCLSGHKWFLSSPMSDAFIMLA 247
             + IG+ +TEK+GG+D+ A  +  + +          Y L+GHKWF S+PM DAF+ LA
Sbjct: 204 NGITIGMSMTEKQGGSDVRANITTAKPVDANKTGPGSAYFLNGHKWFTSAPMCDAFLTLA 263

Query: 248 QVEGRVGCFLVPRLLE-DGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           Q E  + CF+VPR +   G  N GL +QRLK+K+G+RSNA+ E+E+ N +  LLG     
Sbjct: 264 QTENGLSCFIVPRWVPSTGERNEGLRFQRLKSKVGDRSNASSEVEYHNAYAELLGPEGRG 323

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     LD  + +   M+ +L EA+++   R   G +L+D P+M+  +AD+ ++
Sbjct: 324 IAIILEMVQNTRLDCLVGTAGLMKRALFEAVNHTSHRSAFGSVLLDTPLMRAVVADLTIE 383

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AATAL+FR+A++FD A++   + A  RI   I KY  CK AP  + EAME +GG+GY+
Sbjct: 384 SEAATALAFRIASTFD-AQASEYDKALGRIATAIAKYHICKRAPQFVYEAMESLGGNGYV 442

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KV 483
           +E  + R YR++P N+I  GSGN + LDVL    +  +  E L   L   LG   +  + 
Sbjct: 443 DEGPMGRLYRQAPLNAIWEGSGNVICLDVLRCFHREPDAVEALMHELS-SLGHVEEYGRK 501

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTH 542
              L+  I    +++G  R +    AL   A AL R     + D FL+ R         +
Sbjct: 502 FNKLKAEIENIGQNQGRLRNIVGTAALLLQAVALSRTSTEAVVDAFLKTRLSGSPTRLEY 561

Query: 543 CMLHGRFNAAHIIDS 557
             L    +   II  
Sbjct: 562 GALEPGCDVDAIITR 576


>gi|325003190|ref|ZP_08124302.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 551

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/539 (34%), Positives = 278/539 (51%), Gaps = 11/539 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ P     +   +D  +V             LE L E + +   +E AR AN +
Sbjct: 19  THEVTNQVPPRADGDLLGADPAVVEASDREGG-DRAALESLAERIGTAAHREHARAANAH 77

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+LH +   G R D+V FHP+WH L+R S+  GL  +     +       AH  RAA  
Sbjct: 78  EPELHTHDRTGHRIDEVGFHPSWHELMRVSVEHGLAAAP----WAAAPGTGAHVTRAAGF 133

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL +Q+E GHL   S+T A++ AL   P +   + P + +R Y+P    P  K+ +  G+
Sbjct: 134 YLHSQVEQGHLCPISMTYAAVPALQHAPELAAAYLPGLTARSYEPGLADPATKSGLLAGM 193

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ + ++      DG Y L+GHKWF S+PM+D F+ LAQ  G + C ++PR
Sbjct: 194 SMTEKQGGSDVRSGSTVAVPQPDGSYRLTGHKWFTSAPMNDLFLTLAQAPGGLTCLVLPR 253

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +L DG+ N +  QRLK+K+GNRSNA+ E+E+S   G+ +G+       + +M  +  LD 
Sbjct: 254 VLPDGTRNAIRLQRLKDKLGNRSNASSEIEYSGAAGWRVGEEGRGVRTIIEMVSMTRLDC 313

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            + +    R ++ EA H+   R   G  L DQP+M+  +A++A +  AAT L+ RLA + 
Sbjct: 314 VLGAAGTQRAAVTEAAHHVAHRSAFGARLADQPLMREVVAELAAESEAATVLALRLAGAV 373

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E A  R+  P  KY  CK   AV+AEA+EC+GG+GY+EE  + R YRE+P N
Sbjct: 374 DRG-----ETALLRLALPAAKYLVCKRTSAVVAEALECLGGNGYVEESDLPRLYREAPLN 428

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           SI  GSGN   LDVL  + +     + L + ++   GS  +    I      L    +  
Sbjct: 429 SIWEGSGNVTALDVLRAIAREPAAVDALLAEIDLGAGSDPRLDAVIAALRAELAAPQERR 488

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHSTHCMLHGRFNAAHIIDSL 558
           AR L E  ALA   + + R     +ADV L +R   D    T     G      +++  
Sbjct: 489 ARRLAELAALALQGSLVVRHAPAAVADVLLASRLDGDGPLRTAGTRPGSDAVGTLLERA 547


>gi|170740350|ref|YP_001769005.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194624|gb|ACA16571.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 538

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 207/540 (38%), Positives = 292/540 (54%), Gaps = 12/540 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFP-SVVHKELELLGEYVLSCTAQELARMANY 79
           +   LNQ   F  +N  ++D+ L   +           L   G    +    E  R+AN 
Sbjct: 3   THDVLNQSTPFADVNLIAADAPLRGALRANGVDPDEPGLAAFGAEWGAAERLEGGRLANE 62

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +   G R D+VEFHPA+HAL+R S+  GLH S+WD +   +   + H  RAAR
Sbjct: 63  NPPRLRTHDASGRRADRVEFHPAYHALMRASVGAGLHASLWDGAAPALPFGRGHVARAAR 122

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           LY +A +E+GHL   ++TSA++ AL   P     W P++ SR YDP  +   +K  V +G
Sbjct: 123 LYAVAGVESGHLCPMTMTSAAVAALAAAPDHLAAWWPRLTSRRYDPEFRPWFEKAGVTLG 182

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           +G+TEK+GGTD+ A T+  +   D +Y L+GHKWF S+PM DAF++LAQ    + CFLVP
Sbjct: 183 MGMTEKQGGTDVRANTTAARPAGDDVYHLTGHKWFFSAPMCDAFLVLAQAPDGLSCFLVP 242

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   D S N L  QRLK+K+GNRSNA+ E+EF   FG+ LG+       +  M  L  LD
Sbjct: 243 RHRPDRSVNALRLQRLKDKLGNRSNASAEVEFEEAFGWRLGEEGRGLRTILAMVQLTRLD 302

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S    R++LA A+H+AR R   G  L DQP M+  +AD+AL + A  AL  RL+ S
Sbjct: 303 CAVASAGLGRMALALALHHARHRSAFGRPLADQPAMRAVLADLALAVEAQVALVMRLSAS 362

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD       EA  AR++ P  KY  CK AP ++AEAMEC+GG+GY+EE  + R YRE+P 
Sbjct: 363 FDRG-----EAVRARLLTPAAKYAVCKAAPGLVAEAMECLGGNGYVEENPLPRLYREAPV 417

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-CKEDK 498
           N+I  GSGN M LDVL    +       + + L  +              +  L   +  
Sbjct: 418 NAIWEGSGNVMALDVLRAASRAPEEARAVLAALAAEARDLPGAARAARDVAEGLAAPDAP 477

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             ARF+T ++A  ++AAAL  +    +A+ +   R           L G  +     D L
Sbjct: 478 ARARFVTGRLAALAAAAALATSAPPALAEAYARTRLAGEH-----ALFGSADLGREADLL 532


>gi|302522630|ref|ZP_07274972.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302431525|gb|EFL03341.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 450

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 179/443 (40%), Positives = 246/443 (55%), Gaps = 15/443 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQEL 73
           S +    NQPP  +G + + +D  L   +              EL  LG    S  AQE 
Sbjct: 16  SRTHTVTNQPPPLVGYDVFGADRALSEAVERHLDPALLPGARTELSELGRAAGSAQAQEW 75

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN N P+L  +   G R D+VEFHPAWH LL  ++  GL  +          R   H
Sbjct: 76  GAQANENPPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGLTSA--------WARPGGH 127

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             RAA      Q EAGH    S+T A++ AL   P +  +W P + SR YD   +    K
Sbjct: 128 VRRAAGFLTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAK 187

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                G+G+TEK+GG+D+ A T++      DG + L+GHKWF S+PMSD F++L Q  G 
Sbjct: 188 AGALFGMGMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGG 247

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CFLVPR+L DG  N    QRLK+K+GNRSNA+ E+EF  T+  L+G+       + +M
Sbjct: 248 LSCFLVPRVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEM 307

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                LD A+ S + MR ++A+AIH+A  R   GG L+ +P+M   +AD+AL+  AAT L
Sbjct: 308 VSATRLDCALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTL 367

Query: 373 SFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + RLA ++D A +  E E A  R+  P+ KYW  K    V+AEA+EC+GG+GY+EE  + 
Sbjct: 368 ALRLAAAYDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVAEALECLGGNGYVEESGLP 427

Query: 432 RHYRESPANSILLGSGNAMVLDV 454
           R  RESP NS+  GSGN   LDV
Sbjct: 428 RLLRESPLNSLWEGSGNVQALDV 450


>gi|260425854|ref|ZP_05779833.1| protein AidB [Citreicella sp. SE45]
 gi|260420346|gb|EEX13597.1| protein AidB [Citreicella sp. SE45]
          Length = 544

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 187/540 (34%), Positives = 277/540 (51%), Gaps = 13/540 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQPP    ++    D  L   +A   +    EL   G  +     +  AR AN N
Sbjct: 12  THRVENQPPGRGDLDLVGGDRPLQDGLAGLDAGRSAELAAYGLALGREEMRWAARDANRN 71

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y  GG R D++ FHPA+H  +  SI  G H   W+       +   H   AA +
Sbjct: 72  PPELQGYDRGGRRLDELRFHPAYHLFMELSISAGYHALPWE------GQGGGHLAHAAMV 125

Query: 141 YLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           YL +Q+E GH    ++T A + A+      V + W   + SR YDP+ +   QK+   +G
Sbjct: 126 YLASQVEPGHCCPLTMTYAGIAAISDQHGAVAQRWCKALMSRHYDPSVRELSQKSGATLG 185

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + LTEK+GG+D+ +  +  +   D ++ L+GHKWF S+PMSD F+ LAQ    + CFLVP
Sbjct: 186 MALTEKQGGSDVRSNATIAEPDGD-VWRLTGHKWFCSAPMSDGFLTLAQGPEGLSCFLVP 244

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R LE G  NG+   RLK+K+GNRSN + E+E+     + LG        + +M     LD
Sbjct: 245 RWLE-GGRNGIRIARLKDKLGNRSNGSSEIEYERALAWPLGAPGAGVRTIIEMIHHTRLD 303

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+     MR +LAEA H+   R      LIDQP+M+  +AD+ALD+  + AL  R+A +
Sbjct: 304 TAMAPAGLMRAALAEAHHWVSHRSAFQRRLIDQPLMRTVLADLALDLEGSLALGLRVAGA 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           FD   +   + A+ARI   + KY   K+ P V+ EAME +GG+GY+E+  +   YRE+P 
Sbjct: 364 FD--GTGEADRAFARIGVALAKYLSNKLCPVVVCEAMEILGGAGYVEDGPLPMLYREAPL 421

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDK 498
           N I  GSGN + LDVL  L +     E L +       +SG+    +           ++
Sbjct: 422 NGIWEGSGNVICLDVLRTLTRDPAAREVLMAEFSDASAASGRFASALSAHQTRWPGLPEE 481

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
             AR   E+ AL  +AAAL R    +IA+ F++ R L     T   +    +A  +ID L
Sbjct: 482 AEARAFVERTALLLAAAALLRTVPAEIAEAFIDTRLLSPRGRTPGAIPA-MDAGALIDRL 540


>gi|83858606|ref|ZP_00952128.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83853429|gb|EAP91281.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 567

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 191/547 (34%), Positives = 290/547 (53%), Gaps = 14/547 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMAN 78
            +    NQ    +G+N Y+ D++L + ++   + VH E L  +G  V S   Q+LARMAN
Sbjct: 27  STHTVANQSEPLVGVNWYADDAMLKSALSRNGADVHAERLSSMGAEVGSDGVQDLARMAN 86

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+   +   G R D+VEFHPA+HAL+   +  G+  + W     P      H + AA
Sbjct: 87  ENPPRFKPFDRFGHRIDEVEFHPAYHALMELGLGHGVSSAAWTVEQAP------HSLHAA 140

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L LM   +AG     S+T AS+ AL  +      W   + +  YDP    P +K  + +
Sbjct: 141 LLMLMGTADAGVCCPQSMTYASVPALRKSDWT-GPWIQGVTAGRYDPRFLPPEEKVGLTL 199

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----VEGRVG 254
           G+ +TEK+GG+D+ A  ++ +     I  L+GHKWF S+PMSD F+ LA      + ++ 
Sbjct: 200 GMAMTEKQGGSDVRANATRAESADGDIVTLTGHKWFCSAPMSDGFLTLAYEGDGDDAQLS 259

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFLVPR   DG  N +  QRLK+K+G++SNA+ E+E+   +   +G+       + +M  
Sbjct: 260 CFLVPRWTPDGERNTIEIQRLKDKLGDKSNASSEIEYKQAWARRVGEPGRGVRTIIEMVN 319

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD    S   +R   A A+ +A RR      LIDQP+M+  +A++A++  AA AL+F
Sbjct: 320 HTRLDCLAGSAGLIRNGAAYAVWHADRRSAFQRRLIDQPLMREVLAEMAMEAEAALALAF 379

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A SFD+A S   EAA AR++ PI KYW CK AP +  EAME  GG+GY+EE  + R +
Sbjct: 380 RVAESFDKADSDPNEAALARLLTPIAKYWICKRAPYLTYEAMEAHGGAGYVEEHPLPRMF 439

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
           R+SP N+I  GSGN + LDVL  L +     E L + L    G        +   + ++ 
Sbjct: 440 RQSPLNAIWEGSGNVIALDVLRALARDEAAREALTAELAPAYGRHPALDARLNALTRMAA 499

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
               +  AR   E  A A +A+ L RAG++  AD ++  R  +N  ++        +   
Sbjct: 500 GGIGEADARRFAEWAATALTASTLIRAGLDPAADAYIGRRIAENP-TSLGAGEAAIDHEW 558

Query: 554 IIDSLYL 560
           +I+   L
Sbjct: 559 LINRARL 565


>gi|289744395|ref|ZP_06503773.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987]
 gi|289684923|gb|EFD52411.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987]
          Length = 445

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 160/447 (35%), Positives = 238/447 (53%), Gaps = 9/447 (2%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           +H + W        R  AH +RAA+  +   +E GH+   S+T A + AL     +   +
Sbjct: 1   MHAAPWADD-----RPGAHVVRAAKTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVY 54

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + SREYDP  K    K  +  G+ +TEK+GG+D+ A T+Q    +DG Y L+GHKWF
Sbjct: 55  EPLLTSREYDPELKPATTKAGITAGMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWF 114

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            S+PM D F++LAQ    + CFL+PR+L DG+ N +  QRLK+K+GN +NA+ E+E+   
Sbjct: 115 TSAPMCDIFLVLAQAPDGLSCFLLPRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGA 174

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             +L+G+       + +M  L  LD A+ S + MR  L  A+H+A+ R   G  LIDQP+
Sbjct: 175 VAWLVGEEGRGVPTIIEMVNLTRLDCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPL 234

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIA 413
           M+  +AD+A++  AAT ++ R+A + D A   +E EA   RI     KYW CK + A  A
Sbjct: 235 MRNVLADLAVEAEAATIVAMRMAGATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAA 294

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           EA+EC+GG+GY+E+  + R YRE+P   I  GSGN   LD L  +       E LF  L 
Sbjct: 295 EALECLGGNGYVEDSGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELA 354

Query: 474 QDLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           +  G   +    +  LR  +         AR + E I LA   + L R G   +A+ FL 
Sbjct: 355 RSAGQDPRLDGHVERLRPQLGDLDTIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLA 414

Query: 532 NRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            R        +  +    + A I++  
Sbjct: 415 TRLGGQWGGAYGTMPAGLDLAPILERA 441


>gi|167813734|ref|ZP_02445414.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
          Length = 453

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 171/447 (38%), Positives = 249/447 (55%), Gaps = 14/447 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 12  TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 71

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        +  A   R 
Sbjct: 72  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----QPGAMAARC 126

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 127 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 186

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV--EG 251
           +G+G+TEK+GG+D+ +  +    +  G     Y L GHKWF S+P  DA ++LA+   + 
Sbjct: 187 VGMGMTEKQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQA 246

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            + CF VPR   DGS N +  QRLK+K+GNRSNA+ E+EF N +G ++GD       + +
Sbjct: 247 GISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIE 306

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M     LD  I S + MR +L +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT 
Sbjct: 307 MANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATV 366

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           L  RLA++F  D A    +   + RI+ P  K+W CK       EAME  GG+GY+E   
Sbjct: 367 LFMRLAHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGP 426

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
           +AR YRE+P NSI  GSGN M +DVL 
Sbjct: 427 MARFYREAPVNSIWEGSGNVMCIDVLR 453


>gi|326315001|ref|YP_004232673.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323371837|gb|ADX44106.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 555

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 182/556 (32%), Positives = 273/556 (49%), Gaps = 20/556 (3%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ       +  ++D+ L   +           L      + S   Q LA++AN 
Sbjct: 5   THEVFNQYAELADYDLLATDAALQEALQRAGAGHALPALGEYARRLGSAETQALAQLANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP LH +   G R D+VEFHPAW AL+      GL    +D               AA 
Sbjct: 65  HTPTLHRFDSRGRRIDRVEFHPAWDALMALYRGQGLVSMPFDSDRAGRW-----AAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T A++  L   P +      ++ SR +DP      +K  + +G
Sbjct: 120 FYLHGQVEQGTLCPATMTQAAIPLLRKEPALWAQLGDRLHSRTHDPRELPAHEKAGIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+P SDA +++A+    G  
Sbjct: 180 MGMTEKQGGSDVRANTTVAMPLGAGGRGGEYRLRGHKWFFSTPQSDAHLVVARTGEGGPF 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR L DG+ NG+  QRLK+K+GNRSNA+ E+EF + +G L+G+       + +M 
Sbjct: 240 ACFYVPRRLPDGTLNGVHVQRLKDKVGNRSNASGEVEFDDAWGVLMGEEGRGIPTIIEMA 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+    S + +R +  +AI YARRRH  G  L  QP+M+  +AD+AL+  AA AL 
Sbjct: 300 TYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKALAAQPLMRTVLADLALESEAALALL 359

Query: 374 FRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            RLA +F   D   +   + A+ R+M P  K+W CK    +  EAME  GG+GY++E  +
Sbjct: 360 MRLAEAFERDDGGTASPADRAWKRVMTPAAKFWVCKRGVEMSGEAMEVFGGNGYVQEGVM 419

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LR 488
           AR + E+P NSI  GSGN M LDVL  L +       L   L        +  + +  L+
Sbjct: 420 ARLFLEAPVNSIWEGSGNVMCLDVLRALARDPEAAHALLEELAPAAQGEPRIAVALRELQ 479

Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD-NCHSTHCMLH 546
             ++   E  + L R L +++ L + A  L R     +AD F+  R  D     T   + 
Sbjct: 480 ALLARPPEALEALGRLLVQRLVLLAQACLLRRHAPAAVADAFIATRLSDPGAGRTVGAID 539

Query: 547 GR-FNAAHIIDSLYLD 561
            R      ++   + D
Sbjct: 540 LRAAETGQVLARAFPD 555


>gi|260432495|ref|ZP_05786466.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416323|gb|EEX09582.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157]
          Length = 560

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 180/554 (32%), Positives = 276/554 (49%), Gaps = 17/554 (3%)

Query: 9   RLAMNQVH--QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVL 66
              M++ H  +   +    NQPP    ++ ++SD +L        +            + 
Sbjct: 18  EAPMSKSHARKTLPTHEVTNQPPDRGDVDLWASDLVLRDCATRAGARAAPLAAYG-AALG 76

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
               +E  R AN + P+L  +  GG R D+V FHPA+H ++  S   G     WD +   
Sbjct: 77  RAETREAGRDANLHPPELCLFDRGGRRLDEVRFHPAYHHMMDLSQSAGYAALAWDGA--- 133

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H   AA +YL +Q+E GH    ++T A++ AL   P + + W PK+ +  YDP 
Sbjct: 134 ---PGGHATHAAMVYLASQVEPGHCCPLTMTYAAVPALAANPELAEIWRPKLTAATYDPA 190

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            +   +K S  +G+ +TEK+GG+D+ A T+   +  D  + L GHKWF S+PMSD F+ L
Sbjct: 191 PRPIGEKRSATLGMAMTEKQGGSDVRANTTTATRDGDA-WRLRGHKWFCSAPMSDGFLTL 249

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           AQ  G + CFL+PR LE    N +   RLK+K+GNR+NA+ E+EF +   F LGD     
Sbjct: 250 AQAPGGLTCFLLPRWLE-SERNAIHLMRLKDKLGNRANASSEVEFHDALAFQLGDEGAGV 308

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     LD+A+     MR +L+EA H+   R      LIDQP+M+  +AD+ALD 
Sbjct: 309 RTIIEMVHHTRLDTAMAPAGLMRAALSEAHHWVSHRSAFQRRLIDQPLMRAVLADLALDW 368

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L  R+A +FD     +E+ A+ARI   + K+   K  P V  EAME +GG GY+E
Sbjct: 369 EGALTLGLRVARAFD--GETAEDRAFARIGVALAKFLSNKRCPVVAVEAMEVLGGMGYVE 426

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVI 484
           +  +   YRE+P N I  GSGN + LD+L  L +     + + + L+   G+  +    +
Sbjct: 427 DTPMPMLYREAPLNGIWEGSGNVICLDILRSLARDPLAAQTVQAELDAATGADRRYDAAL 486

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              RD        +  AR+ TE  A   +AA L R     +AD ++  R L         
Sbjct: 487 KAHRDRWPTLPP-EAEARWFTEATAHLLTAALLLRHAPGAVADGYIATRVLGESGRIPGS 545

Query: 545 LHGRFNAAHIIDSL 558
           + G  +   ++  L
Sbjct: 546 VSG-LDTDALLGRL 558


>gi|83950362|ref|ZP_00959095.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83838261|gb|EAP77557.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 540

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 187/541 (34%), Positives = 272/541 (50%), Gaps = 13/541 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           SD+    NQPP       ++ D  L    A       ++L   G  +    A   AR A 
Sbjct: 10  SDTHEVTNQPPPRGNRRLWADDPALRD-HAAAAGAEGEQLSDYGALMGHAEAAVAAREAR 68

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              PQ   +  GG R D+V FHP++H LL   I  G     W+       R   H   AA
Sbjct: 69  DYPPQARIFDAGGRRLDEVRFHPSYHQLLEAGIGAGYAALPWE------GRPGGHATHAA 122

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +YL +Q+E G     ++T A++ AL +   + + W PK+ SR YD   K   +K    +
Sbjct: 123 MVYLTSQVEPGICCPMTMTYAAVPALRSDATLLRTWVPKLTSRVYDGAAKPLARKPGATM 182

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+ +TEK+GG+D+ A  ++       +Y L GHKWF S+PMSD F+MLAQ  G + CFLV
Sbjct: 183 GMAMTEKQGGSDVRANATRAVAEG-EMYRLRGHKWFCSAPMSDGFLMLAQAPGGLSCFLV 241

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           PR L++   NG+  QRLK+K+GN +NA+ E+E  + +G LLG+       + DM     L
Sbjct: 242 PRWLDER-RNGIHLQRLKSKLGNHANASAEIELVDAYGHLLGEEGDGVRVILDMVHHTRL 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           D+A+     MR +L  A H+AR R V G  L DQP+M+  +AD+ALD     AL   +  
Sbjct: 301 DTALAPAGLMRAALDHAWHWARHRQVFGRGLADQPLMRTVLADLALDWEGTLALGLHMGA 360

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +FD     S   A+AR+   + KY   K+ P V+ EAME +GG GY+E+  +   YRE+P
Sbjct: 361 AFDRDDEASR--AFARLGVALAKYLGNKLCPGVVYEAMEALGGMGYVEDTELPMLYREAP 418

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-ED 497
            NSI  GSGN + LDVL  L+K     E L + L +  G S    + +        +  D
Sbjct: 419 LNSIWEGSGNVICLDVLRSLQKLPLAGEVLSAELSEATGQSRAYDMALRTHMERFTRLPD 478

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +G AR+  E +A   +A+ L R     I+D +   R       +   + G  +   I+  
Sbjct: 479 EGEARWYVESLATLLTASVLIRQAPGPISDAYCATRLGGARGRSAGAVQG-LDTDAILAR 537

Query: 558 L 558
           L
Sbjct: 538 L 538


>gi|258654546|ref|YP_003203702.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258557771|gb|ACV80713.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 542

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 176/543 (32%), Positives = 271/543 (49%), Gaps = 10/543 (1%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
             +   +N     +G +  ++D  L A +A   +   + L  L     +    E AR+A+
Sbjct: 2   PPTHDVVNVVDPLVGFDVAAADPALAAGLAAAGTTPTEPLRSLAVDAGAAEWAEQARLAD 61

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P LH +   G R D++E+HP+WH L+ R++  GL  + W     P     AH  RAA
Sbjct: 62  RNPPVLHTHDRAGRRVDEIEYHPSWHRLMGRAVGAGLQAAPW----APDAGAHAHLHRAA 117

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q E+GHL   S+T A++ AL     + +++ P + S EYD   +    K  +  
Sbjct: 118 GFYLWTQTESGHLCPISMTYAAVPALRHDADLAREFEPGLCSPEYDFGLRPAAAKRGLLA 177

Query: 199 GLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+ +TEK+GG+D+ A T++     D G Y L+GHKWF S+PM+D F+ LAQ  G + CF+
Sbjct: 178 GMSMTEKQGGSDVRAATTRAVPEGDAGHYRLTGHKWFTSAPMNDLFLTLAQAPGGLSCFV 237

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR+L DG  N +   RLK+K+GNRSNA+ E+E+       LG+       + +M  +  
Sbjct: 238 VPRVLPDGQRNAVSVLRLKDKLGNRSNASGEIEYDGALARRLGEEGRGVPTILEMVTMTR 297

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD  + S   +R  L++A +YA  R   G  LI+   M   +AD+A++  AAT    RLA
Sbjct: 298 LDCVLGSAGQIRAGLSQAAYYAAHRRAFGRRLIEHEAMAAVLADLAVESWAATLTGLRLA 357

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D+       A   R+  P  K+W CK A  V+AEA+EC+GG+GY+E    AR  RE+
Sbjct: 358 DLVDD--RSPAAATLLRLALPAAKFWICKRAVPVLAEALECLGGNGYVETFPTARLLREA 415

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE- 496
           P N I  GSG    LD +  L +     + L + L            + +R+   L ++ 
Sbjct: 416 PLNGIWEGSGTVTALDAVRALGRSPECAQALLAELAGAA-GGHPAFDSAVRELTGLLRQP 474

Query: 497 -DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            D   AR L    A   +A  L R     +A+++   R   +       +      A I+
Sbjct: 475 PDPATARRLCSLTARTLAAGLLLRHAPAPVAELYCATRLGWSGDRVFGEVPPGTATAGIV 534

Query: 556 DSL 558
           +S+
Sbjct: 535 ESI 537


>gi|213163310|ref|ZP_03349020.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 424

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 158/426 (37%), Positives = 240/426 (56%), Gaps = 7/426 (1%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF 
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFF 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ L +       +  M  +  
Sbjct: 240 VPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLREEGEGIRHILKMGGMTR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           LD A+ S   MR + + AI++A +R   G  LI+QP+M++ ++ +AL +   TAL FRLA
Sbjct: 300 LDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLA 359

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++++ +  ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE 
Sbjct: 360 RAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREM 418

Query: 438 PANSIL 443
           P NSI 
Sbjct: 419 PVNSIW 424


>gi|167721801|ref|ZP_02405037.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
          Length = 471

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 168/478 (35%), Positives = 250/478 (52%), Gaps = 18/478 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRD 489
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR 
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRA 471


>gi|167817992|ref|ZP_02449672.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
          Length = 469

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 168/468 (35%), Positives = 248/468 (52%), Gaps = 16/468 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L  AL     S     L+  G  + +     LA  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G   +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDAR 461


>gi|167913110|ref|ZP_02500201.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
          Length = 475

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 170/480 (35%), Positives = 252/480 (52%), Gaps = 18/480 (3%)

Query: 26  NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ       N +++D  L  AL     S     L+  G  + +     LA  AN + P+L
Sbjct: 3   NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 62

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           +A+   G R D+V+FHP+WHALL      GL    +  S     R       AA  YL  
Sbjct: 63  NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 117

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ IG+G+TE
Sbjct: 118 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 177

Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           K+GG+D+ A T+    +      G + L GHKWF S+PM DA +++A+ E G   CF VP
Sbjct: 178 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           R   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M     L+
Sbjct: 238 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + S + +R  L +AI Y R+RH  G  L +QP+M+  +AD+AL+  AA AL+ RLA +
Sbjct: 298 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 357

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+  +      A+ RI+AP  K+W CK A     E ME  GG+GY+++  IAR +RE+P 
Sbjct: 358 FERGEP-----AWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 412

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497
           NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +    + 
Sbjct: 413 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHALGGRDARIRAELDALRAQLGTPPDA 472


>gi|84687411|ref|ZP_01015289.1| putative acyl-CoA dehydrogenase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664569|gb|EAQ11055.1| putative acyl-CoA dehydrogenase [Rhodobacterales bacterium
           HTCC2654]
          Length = 537

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/539 (31%), Positives = 272/539 (50%), Gaps = 13/539 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQP      + ++SD+ L   +      V       G    +   +     A  N
Sbjct: 11  THEVENQPGAPAARDLWASDATLRDHVLAAGGRVDAAATA-GASFGTEALRAAGEAARAN 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V FHP +H +++  +  G     WD +         H   AA +
Sbjct: 70  PPELKLFDRAGRRLDEVHFHPGYHEVMQAGMAAGYAALAWDGA------PGGHATHAAMV 123

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+++Q+E G     ++T A++ AL   P +   WAPK+   EYDP+     +K +  +G+
Sbjct: 124 YMLSQVEPGICCPLTMTYAAVPALAADPALEAVWAPKLTGTEYDPSIAPVGRKRAATMGM 183

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++ +    G++ L+GHKWF S+PMSD F+ LA  E  + CFLVPR
Sbjct: 184 AMTEKQGGSDVRANTTRAEPAG-GMWRLTGHKWFCSAPMSDGFLTLAYTEAGLTCFLVPR 242

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
             ++G  N +  QRLK+K+GNR+NA+ E+E+       LG+       + +M     LD+
Sbjct: 243 WTDEG-RNPIQIQRLKDKLGNRANASSEIEYHGALAHKLGEDGRGVATIIEMVHHTRLDT 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+     MR +L EA H+   R      LIDQP+M+  +AD+AL+   A AL  R A +F
Sbjct: 302 AMAPAGLMRAALVEAKHWVEGRSAFQKRLIDQPLMRSVLADLALEWEGALALGMRAARAF 361

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D      E+ A+ARI   + K+   K    VI EAMEC+GG GY+EE  +   YRE+P N
Sbjct: 362 D--GDAPEDRAFARISVALAKFLSNKRCGPVILEAMECLGGMGYVEETPMPMLYREAPLN 419

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKG 499
           SI  GSGN + LD+L  L +       L + LE   G+  +    +           ++G
Sbjct: 420 SIWEGSGNVICLDILRTLAREPMAGAALRAELEAATGADRRYDAALAAHFDRWPALPEEG 479

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            AR+  E++A+  +A+ L RAG   ++D ++  +           + G  + A +I  +
Sbjct: 480 EARWFAERLAVLLAASVLLRAGNAAVSDGWIATKVDGARGMVPGAVSG-LDTAALIARI 537


>gi|167620959|ref|ZP_02389590.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 477

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 169/484 (34%), Positives = 252/484 (52%), Gaps = 18/484 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQ       N +++D  L   +     S     L+  G  + +    + A  AN
Sbjct: 4   STHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L+A+   G R D+V+FHP+WHALL      GL    +  S     R       AA
Sbjct: 64  RHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAA 118

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q+EAG L   ++T AS+  L   P +      K++S  +DP +     K S+ I
Sbjct: 119 GFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMI 178

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253
           G+G+TEK+GG+D+ A T+    +  G     + L GHKWF S+PM DA +++A+ E G  
Sbjct: 179 GMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGP 238

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E  + +G +LG+       + +M 
Sbjct: 239 SCFYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMA 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L+  + S + +R  L +AI YAR+RH  G  L +QP+M+  +AD+AL+  AA AL+
Sbjct: 299 TYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALA 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLA +F+       EAA+ RI+ P  K+W CK A     E ME  GG+GY+++  IAR 
Sbjct: 359 MRLAQAFERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARL 413

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +RE+P NSI  GSGN M LDV+  + +  +    L   L    G     +  +  LR  +
Sbjct: 414 FREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALL 473

Query: 492 SLCK 495
               
Sbjct: 474 GTPP 477


>gi|318607410|emb|CBY28908.1| alkylation response protein AidB, acyl-CoA dehydrogenase family
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 435

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/437 (36%), Positives = 239/437 (54%), Gaps = 11/437 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMAN 78
            +    NQP      N Y SD  L   +         ++L  +G  + S  + EL R+AN
Sbjct: 4   QTHLVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G+R D+V FHPAW+ L++  ++  +H   W        R  +   RAA
Sbjct: 64  ANPPELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++T  ++  L  T P + + W P + S  YD       QK  + 
Sbjct: 120 RFILHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+G+TEK+GG+D+ + +++ + ++       Y L GHKWF S P SDA ++LAQ EG +
Sbjct: 180 IGMGMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGL 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +P++L DG+ N +  +RLK K+GNRSNA+ E+EF N   +LLGD       +  M 
Sbjct: 240 SCFFLPKMLPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMG 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                D A+ S   MR + + A+++  +R   G  L+DQP+M++ ++ +AL +   TAL 
Sbjct: 300 GYTRFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALL 359

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            RLAN++ E    + E  ++R++ P  KY  C +    +AEAME +GG GY E+  + R 
Sbjct: 360 MRLANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRI 418

Query: 434 YRESPANSILLGSGNAM 450
           YRE P NSI  GSGN M
Sbjct: 419 YREMPVNSIWEGSGNIM 435


>gi|167564599|ref|ZP_02357515.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 471

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/481 (35%), Positives = 253/481 (52%), Gaps = 18/481 (3%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
             S     L+  G  + +    + A  AN + P+L+A+   G R D+V+FHP+WHALL  
Sbjct: 1   GASWAAPRLDAYGARLGARDTAQQAEDANRHVPELNAFDRRGRRIDRVDFHPSWHALLGL 60

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
               GL    +        R       AA  YL  Q+EAG L   ++T A +  L   P 
Sbjct: 61  YRGQGLISLAFRD-----ARAGRWAANAAGFYLHGQIEAGTLCPATMTQAGIPVLQKEPA 115

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGI 225
           +      K++S  +DP +     K S+ +G+G+TEK+GG+D+ A T+    +      G 
Sbjct: 116 LWAQLKDKLYSDVHDPRDVPIDAKQSITLGMGMTEKQGGSDVRANTTVAAPVGAGGRGGD 175

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L GHKWF S+PM DA +++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN
Sbjct: 176 YLLRGHKWFFSAPMCDAHLIVARTESGGPSCFYVPRWRPDGTKNAVLIQRLKNKVGNRSN 235

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           ++ E+E  + +G +LG+       + +M     L+  + S + +R  L +AI YAR+RH 
Sbjct: 236 SSSEVELDDAWGVMLGEEGRGIPTIIEMANYTRLNCVLGSAAILRQGLVQAIAYARQRHA 295

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L +QP+M+  +AD+AL+  AA AL+ RLA +F+  +      A+ RI+ P  K+W 
Sbjct: 296 FGRALAEQPLMRAVLADLALESEAALALAMRLAQAFERGEP-----AWTRIVTPAAKFWV 350

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           CK A     E ME  GG+GY+++  IAR +RE+P NSI  GSGN M LDV+  + +  + 
Sbjct: 351 CKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDA 410

Query: 465 FEQLFSTLEQDLGSSG--KKVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAG 521
              L   L    G     +  +  LR  +    +  + L R L ++IAL + A  L  A 
Sbjct: 411 AHALVDELHALGGRDARIRAELDALRALLGTPPDAREALGRVLAQRIALVAQACLLLDAA 470

Query: 522 M 522
            
Sbjct: 471 P 471


>gi|329890652|ref|ZP_08268995.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845953|gb|EGF95517.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 538

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/542 (33%), Positives = 271/542 (50%), Gaps = 20/542 (3%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMAN 78
           D+    NQ P    ++ ++ D  L   + ++    H + L  LG    S    +    AN
Sbjct: 11  DTHEVSNQVPPLEDVDLFTGDRALHDAVRHWGGAGHVERLSDLGRRCGSAEVIDWGVQAN 70

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P L  +   G R D+V FHPA+H L+   +  G+    WD +         H + AA
Sbjct: 71  RVPPVLDTHDRYGRRIDEVTFHPAYHQLMDLGLGAGIAAGAWDGT------PNGHLLHAA 124

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L+L  Q ++G     ++T AS+ AL   P V + W   + S  YDP  +   +K  V I
Sbjct: 125 ILFLTGQADSGTSCPMTMTYASVAALQADPAVGEPWIGGVLSGRYDPAVRPASEKAGVTI 184

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           G+ +TEK+GG+D+ A T++ + I  DG Y L+GHKWF S+PM DAF+ LA   G + CF+
Sbjct: 185 GMAMTEKQGGSDVRANTTRAEPIGEDGWYSLTGHKWFCSAPMCDAFLTLAYAPGGLTCFI 244

Query: 258 VPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +PR L DG+ N G    RLK+K+G+RSNA+ E+E+       LG+       +  M    
Sbjct: 245 LPRWLPDGTRNAGFRVMRLKDKMGDRSNASSEVEYHGALAQRLGEEGRGVATIIRMVQHT 304

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD  + S   MR +LA+A  +A  R      LIDQP+M   + D+A++  AATALS RL
Sbjct: 305 RLDCVVGSALQMRGALAQAAWHAAHRTAFQKRLIDQPMMAAVLTDLAVESEAATALSMRL 364

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +FD       + A  R++ P+ KYW CK AP ++ EAME +GG+GY+E   + R +R+
Sbjct: 365 AATFDA------DDAVGRLLTPVAKYWVCKRAPNLVYEAMEALGGAGYVETGPMPRLFRQ 418

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           SP N+I  GSGN + LDVL    +     E L   L    G S      I    ++    
Sbjct: 419 SPLNAIWEGSGNVIALDVLRAAGREPEAVEALRDWLASQAGKSPDYDRFIAGLEVTAS-- 476

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
            +  AR   E++ALA+ AAAL        A+ F+  R        +       +   +++
Sbjct: 477 -EAGARLAVERLALAAQAAALLEMNSPS-AEAFIALRL-RPRGMAYGAYEVEADHRAVLE 533

Query: 557 SL 558
             
Sbjct: 534 RA 535


>gi|119383699|ref|YP_914755.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119373466|gb|ABL69059.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 542

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/531 (33%), Positives = 268/531 (50%), Gaps = 14/531 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +   LNQP      + +  D LL A++A   + +   L   G  +     ++ AR AN +
Sbjct: 11  THDVLNQPADPGDRDLWRDDPLLRAMLAAGGAPLEG-LARYGALLGRAGMRDAARDANRH 69

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +  GG R D++ FHPAWH  ++ SI  G H   W+           H   AA +
Sbjct: 70  PPELVLFDSGGRRLDELRFHPAWHRFMQDSIAAGYHSVAWE------GGPAGHLTHAAMV 123

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL +Q+E GH    ++T A++  +     +  DW   + SR YDP  +    K    +G+
Sbjct: 124 YLASQVEPGHCCPLTMTYAAVPVISAAGDLPGDWRAALLSRRYDPAVRPLAAKQGATLGM 183

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++ +      + L+GHKWF S+PMSD F+ LAQ    + CFLVPR
Sbjct: 184 AMTEKQGGSDVRANTTRAEPDG-AAWRLTGHKWFCSAPMSDGFLTLAQTGRGLTCFLVPR 242

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            LE+G  N +  QRLK+K+GNRSN + E+E+     + +G+       + +M     LD+
Sbjct: 243 WLEEG-RNAIRIQRLKDKLGNRSNGSAEIEYQRALAWRIGEEGDGIRTIVEMVHHTRLDT 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+     MR +L EA H+A  R      LIDQP+M+  +AD+ LD     AL   +A SF
Sbjct: 302 AMAPAGLMRAALREAHHWAACRSAFQRRLIDQPLMRAVLADLVLDWQGCLALGLHVAASF 361

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     +E+ A+ARI   + KY   K+ P V+AEAME +GG GY+E+  +   YRE+P N
Sbjct: 362 D--GRGAEDRAFARIGVALAKYLSNKLCPQVVAEAMEVLGGMGYVEDTPLPMLYREAPLN 419

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLCKEDK 498
            I  GSGN + LD L  L +     E L + L+   G   +    +   R+        +
Sbjct: 420 GIWEGSGNVICLDALRTLAREPLAAEMLAARLDAAKGLEPAYDAALAAHRECWG-GGVPE 478

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
             AR+  E+ AL  +AA L   G  D+A  F+  R       T   +    
Sbjct: 479 AEARWFAERSALLLTAAVLLAHGDADLAGAFVRTRLGAERGRTPGTIPATL 529


>gi|149913850|ref|ZP_01902382.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
 gi|149812134|gb|EDM71965.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
          Length = 543

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/538 (31%), Positives = 259/538 (48%), Gaps = 13/538 (2%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81
               NQP     +  +  D   +   A         LE     + +   QE    AN + 
Sbjct: 13  HEVTNQPEPRGDLALWGDDPA-LQAHAAAAGAQLGALESYAATIGTAEMQEAGIQANRHP 71

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L A+  GG R D+V +HP +H LL   +  G     W+           H   AA +Y
Sbjct: 72  PELLAFDAGGRRLDEVRYHPDYHRLLETGLSAGYAAIPWE------GGAGGHATHAAMVY 125

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L  Q+E G     ++T A++ AL     +   W PK+ +R YD   +   +K  + +G+ 
Sbjct: 126 LTTQIEPGVCCPMTMTYAAVPALKADADLFAAWVPKLIARAYDGAVRPMARKPGLTMGMA 185

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TEK+GG+D+ A  ++     D  + L+GHKWF S+PMSD F+ LAQ  G + CF+VPR 
Sbjct: 186 MTEKQGGSDLRATVTRAVPDGDA-HRLTGHKWFCSAPMSDGFLTLAQAPGGLTCFVVPRW 244

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L D   N +  QRLK+K+GNR+NA+ E+E+     + LG        + +M     LD+A
Sbjct: 245 L-DHGRNAIRLQRLKDKLGNRANASAEIEYDGALAYRLGPEGEGIRTIIEMVHHARLDTA 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +     MR +L  A H+AR R      LIDQP+M+  +AD+ALD     AL  R+A +FD
Sbjct: 304 MAPAGLMRAALDRAAHWARHRSAFDARLIDQPLMRAVLADLALDWEGTLALGLRVARAFD 363

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E A+AR+   + KY   K+ P ++ EAME IGG+GY+E+  +   YRE+P N 
Sbjct: 364 S--PSEPERAFARLAVALAKYLGNKLCPGLVYEAMEAIGGAGYVEDSGLPLFYREAPLNG 421

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGL 500
           I  GSGN + LD+L  L +     E L + L    G   +    +        K  D   
Sbjct: 422 IWEGSGNVICLDILRTLRRAPLAGEVLSAELGAVSGQYRRYDAALRAHMDRFPKLPDPRE 481

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           AR+  E +    +A+ L +     IA+ ++  R       T   + G  + A I+  L
Sbjct: 482 ARWYAESLGSLLTASVLMQNAPPAIAEAYIATRLSGARGRTAGTI-GAVDEAAILARL 538


>gi|241767839|ref|ZP_04765422.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361084|gb|EER57774.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 439

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 162/441 (36%), Positives = 239/441 (54%), Gaps = 12/441 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ       N  ++D+ L   +    +      L   GE +       LA  AN 
Sbjct: 5   THEVFNQFDELTDFNLLTTDAALGEALQRAGAQGAVPALTAYGERLGCADTWHLAEQANR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +TP LH++   G R D VEFHP+WHAL+      GL    +  +             AA 
Sbjct: 65  HTPVLHSFDARGRRADAVEFHPSWHALMALYRAQGLIAHPFQSN-----DAGRWTAWAAG 119

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q+E G L   ++T+AS+  L   P +       +FS +YD  +    QK S+ +G
Sbjct: 120 FYLHGQVEQGTLCPATMTTASIPVLQKEPALWAQLQTPLFSSDYDARDVPLAQKRSIWLG 179

Query: 200 LGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG 254
           +G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA +++A+  EG   
Sbjct: 180 MGMTEKQGGSDVRANTTLATPLGAGGRGGEYLLRGHKWFFSAPMCDAHLVVARTAEGGHA 239

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF VPR   DGS N +  QRLK+K+GNRSN++ E+EF + +G L+G+       + +M  
Sbjct: 240 CFFVPRWCPDGSKNAVHVQRLKDKVGNRSNSSSEVEFEDAWGILMGEEGRGIPTIIEMAA 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+  I S + +R +  +A+ YARRR   G  L +QP+M+  +AD+AL+  AA  L+ 
Sbjct: 300 TTRLNCVIGSAAMLRQATVQALAYARRREAFGKRLAEQPLMRTVLADLALESEAALVLAM 359

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA +F+   +   + A+ R+M P  K+W CK A  +  EAME +GG+GY++   +AR +
Sbjct: 360 RLAEAFER-DNSPAQRAWKRVMTPAAKFWICKRAVELTGEAMEVLGGNGYVDSSVVARLF 418

Query: 435 RESPANSILLGSGNAMVLDVL 455
           RE+P NSI  GSGN M LDVL
Sbjct: 419 REAPVNSIWEGSGNVMCLDVL 439


>gi|254465120|ref|ZP_05078531.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium
           Y4I]
 gi|206686028|gb|EDZ46510.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium
           Y4I]
          Length = 544

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 173/538 (32%), Positives = 267/538 (49%), Gaps = 13/538 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQP    G + ++ D+ L +  A+    +   L L G    S T  E A  A  +
Sbjct: 15  THEVQNQPQPRGGRDLWAEDAALRSYAAHHGGRMDA-LALAGAEYGSETLLEAAAEARRD 73

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  +   G R D+V F+  +H ++  +   G   + WD +         H   AA +
Sbjct: 74  PPRLELFSRSGRRLDEVRFNAGYHQVMAAAQRLGYAHAAWDGA------PGGHVTHAAHV 127

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y++ Q+E G     ++T A++ AL   P +   W PK+ S EYDP  +    K    +G+
Sbjct: 128 YMLNQVEPGVCCPMTMTYAAIPALRHAPDLAALWHPKLLSAEYDPAVRPVAHKRGATLGM 187

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TEK+GG+D+ A T++  +     Y L+GHKWF S+PMSD F+ LA  EG + CFLVPR
Sbjct: 188 AMTEKQGGSDVRANTTRAVRDGAH-YRLTGHKWFCSAPMSDGFLTLAYAEGGLTCFLVPR 246

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            LE+G  NG+  QRLK+K+GNR+NA+ E+E++    + +G+       + +M     LD+
Sbjct: 247 WLEEG-RNGIRLQRLKDKLGNRANASSEIEYAEALAYRVGEEGAGVRTIIEMVHHTRLDT 305

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+     MR +LAEA  +A  R     +LI QP+M+  +AD+ LD   A A    +A +F
Sbjct: 306 ALAPAGLMRAALAEAFWWAEERAAFQRMLIGQPLMRAVLADLVLDAEGALAAGMAMAAAF 365

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   + S   A ARI   + KY   K    VI EAME +GG GY+EE  +   YRE+P N
Sbjct: 366 DRTDADSR--ALARIGVALAKYLGNKRCIPVIGEAMEVLGGMGYVEETPMPMLYREAPLN 423

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKG 499
            I  GSGN + LD+L  L++       L + L+   G   +    +           D+ 
Sbjct: 424 GIWEGSGNVICLDILRTLDREPRAAAALNALLDGARGGDRRYDAGLAAHRARWPGLPDEA 483

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
            AR+  E +A   +AA L  A    +A+ ++ +R      S    +    +   I+  
Sbjct: 484 EARWFAESLATLMTAACLLDAAPAAVAEGYVTSRIAGERGSLPGSV-AGLDVNAILAR 540


>gi|167518089|ref|XP_001743385.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778484|gb|EDQ92099.1| predicted protein [Monosiga brevicollis MX1]
          Length = 930

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 176/574 (30%), Positives = 274/574 (47%), Gaps = 31/574 (5%)

Query: 2   TLREIYRRLAMNQVHQPSDSLF-ALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELE 59
           T+  + R+ A  +V    ++     NQ       NA+ +D  L  A++    S   + LE
Sbjct: 18  TVSNLQRQAASTKVFAEPEAHRKVENQVNSLGDFNAFKADPCLQDAVLRAGASWATEHLE 77

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            +G    S   Q LA  AN + P +H +   G R D V++  ++H ++      G+    
Sbjct: 78  NVGAVAGSTWMQSLAVQANTHRPIIHTHDDRGRRVDMVQYDDSYHTIMDICFSQGVPNYG 137

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD-WAP 176
           W    E    K A   R+A  Y+M Q E+G     ++T A +  L         +  WA 
Sbjct: 138 WTHEAE----KGAQSARSALSYMMYQAESGTQCPQTMTFACVPVLRKGLNEEQARYGWAE 193

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS----GHK 232
           K    +YDP N    +K +V IG+ +TE +GG+D+ A ++  + +    +       GHK
Sbjct: 194 KAACPDYDPRNVPVYEKEAVTIGMSMTEVQGGSDVRANSTFAEPLKGFEHVRGHLLHGHK 253

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGSPN-GLCYQRLKNKIGNRSNATVELE 290
           WF S+PMSD F+ LAQ    + CFLVPR +   G  N GL ++RLKNK+G+ SNA+ E+E
Sbjct: 254 WFTSAPMSDGFLTLAQTSEGLSCFLVPRWVPSTGERNQGLQFRRLKNKLGDHSNASSEVE 313

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           +   +  L+G+       + DM     LD  + S   +R  L+EA+H+  +R   G  L 
Sbjct: 314 YHGAYAELVGEPGRGVPTIIDMVQHTRLDCLVGSAGLIRRCLSEALHHTSQRAAFGAKLA 373

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           DQP+MK  + D+ +D  AATAL+F +A++FD       +  + RI  PI KY+ CK AP 
Sbjct: 374 DQPLMKAVLTDLIVDSEAATALAFLVASTFDN----DGDKKFGRIATPIGKYYVCKRAPH 429

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
              E +E +GG+GY+E+  + R YR++P N+I  GSGN + LDVL    +     E L  
Sbjct: 430 FAYECLEALGGNGYVEDSIMPRLYRQAPLNAIWEGSGNVIALDVLRSAAREPETVEVLLQ 489

Query: 471 TLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
            L    G  +    +  L   +   ++D   AR L  + A+   A AL      +  ++F
Sbjct: 490 RLGSVQGVPAYDAALKRLHGLLHSVQKDMSQARALVGQAAMLLQAYALSLQTNTETFELF 549

Query: 530 LENRFLDN---CHSTHCM-------LHGRFNAAH 553
            + R           +         L  R +A H
Sbjct: 550 CQ-RLDGGQLAYARDYGTVSYPDTVLRSRLDALH 582


>gi|158424026|ref|YP_001525318.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158330915|dbj|BAF88400.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 574

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 194/486 (39%), Positives = 273/486 (56%), Gaps = 12/486 (2%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
              NQPP F  ++  + D+ L   +      V   L   G    S     L R AN N P
Sbjct: 44  EGFNQPPPFTDVDLLACDAALRDALGAHGP-VPAHLRSAGAEWGSRERMCLGRQANENPP 102

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +LH++   G+R D VEFHPA+HAL+  S   GLHC+ W        + + H  RAARLYL
Sbjct: 103 RLHSHDARGQRLDTVEFHPAYHALMAASSAGGLHCATW--------QGERHLHRAARLYL 154

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            AQ+EAGH+   ++T A+  AL   P +  +W  ++ SR YD       +KT+V +G+G+
Sbjct: 155 TAQVEAGHICPLTMTHAAPAALAAAPELQAEWLGRLTSRLYDGRFLPFWEKTAVTLGMGM 214

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TEK+GGTD+ A  ++  +     Y +SGHKWF S+PM DAF++LAQ    +  FL+PR  
Sbjct: 215 TEKQGGTDVRANVTRADRTGGSEYEISGHKWFFSAPMCDAFLVLAQAPEGLTTFLMPRFR 274

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DGS NGL  QRLK+K+GNRSNA+ E+EF   F + +G        + +M  L  LD A+
Sbjct: 275 PDGSVNGLRLQRLKDKLGNRSNASSEVEFDRAFAWRVGAEGRGVATILEMVQLTRLDCAV 334

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S   MR +L+EA+H AR R V G  L+ QP M+  +AD+AL+  AATAL+ RLA SFD 
Sbjct: 335 SSAGLMRRALSEALHNARHRSVFGRRLVVQPAMRLVLADLALEAEAATALAMRLAASFDA 394

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A    +EAA AR++ P  K+  CK AP  I EAME +GG+GY+E+  + R +RE+P N+I
Sbjct: 395 AAGSPQEAARARLLTPAVKFAVCKAAPDFIYEAMEAVGGNGYVEDSPLPRLFREAPVNAI 454

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--EDKGL 500
             G+G  + LD+L    +       L   L ++ G     V   +R    L +  E +  
Sbjct: 455 WEGTGTVVALDLLRAAGRDPQAMALLLDDLGREAG-GLPGVTATIRQVSGLLRDPEPERH 513

Query: 501 ARFLTE 506
           AR   +
Sbjct: 514 ARLAAQ 519


>gi|312115085|ref|YP_004012681.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220214|gb|ADP71582.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 549

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 192/546 (35%), Positives = 278/546 (50%), Gaps = 16/546 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMAN 78
           D+    N PP F G+N Y +D  L      +    V   L  LG    S  A +    AN
Sbjct: 11  DTHDVTNMPPPFGGLNLYETDIALKEAAGLHGGEWVDGPLSALGAAAGSDEALQAGEDAN 70

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+L  +   G R D+V FHPA+H  +  ++   +H   W        R  AH   AA
Sbjct: 71  RYLPELRTFDRFGGRIDEVRFHPAYHQCMALAMEHRIHSIGWREK-----RPGAHVAHAA 125

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L + +Q EAG +   S+T AS+ AL   P V   W PKI    Y+   +   +K  V I
Sbjct: 126 ALAIGSQAEAGTMCPMSMTYASVAALRKQPDVAAAWLPKIVDGVYEAPLRPIAEKRGVTI 185

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+ +TEK+GG+D+ + +++   +  G     Y L+GHKWF S+PMSDAF+ LA  +  + 
Sbjct: 186 GMFMTEKQGGSDVRSNSTRAVPVGAGGPGGEYLLTGHKWFCSAPMSDAFLTLAYTDRGLS 245

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CFL PR+  D + N +   RLK K+GNRSNA+ E E+ +TF +++G+       + DM  
Sbjct: 246 CFLAPRIKPDSTRNSMNLMRLKEKLGNRSNASAEFEYKDTFAWMIGEDGRGVATIMDMVH 305

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              LD+   S+  MR +LAEA H+AR R      LIDQPVM+  +AD+ALD  AA   + 
Sbjct: 306 HTRLDTTAGSLGIMRRALAEAAHHARHRRAFQKTLIDQPVMRAVLADLALDYEAAAMFTM 365

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A ++D   +  EE  +AR+   + K++  K     +AE MEC+GG GYIEE + AR+Y
Sbjct: 366 RIARAYD--GTTPEERGFARLGVALGKFYIAKRTAPFVAECMECLGGGGYIEEAATARYY 423

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSIS 492
           RE+P N+I  GSGN + LD+L  L+K     + L + L    G   +       L   I 
Sbjct: 424 REAPVNAIWEGSGNVIALDILRTLQKEPLALDGLLAELAAARGRHPAYDASFDALHRLIG 483

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHSTHCMLHGRFNA 551
                +G AR L E++ALA  AA L   G  D+A  + + R   D     +     +   
Sbjct: 484 -GGVVEGDARHLAERMALALQAALLLCHGAPDVASSYCDARLSGDTRGINYGASGAKLAV 542

Query: 552 AHIIDS 557
             I+  
Sbjct: 543 DTILAR 548


>gi|326403007|ref|YP_004283088.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325049868|dbj|BAJ80206.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 547

 Score =  364 bits (934), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 183/517 (35%), Positives = 273/517 (52%), Gaps = 9/517 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ       +A++ D+ L+  ++ F +      L  +G  + S   + LAR AN 
Sbjct: 4   THEVFNQAGEPPAHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANR 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L A+   G R D+V FHPAWH L+     D  H   W        R  AH  RAA 
Sbjct: 64  NPPELAAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWTEP-----RPGAHVARAAV 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q E G     ++T A+  AL   P +   +  +I +  YDP    P +K ++ + 
Sbjct: 119 AYLWGQGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKPALGVA 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+    +   +  D  + L+GHKWF S P SD F+ LA+    + CFL  
Sbjct: 179 MAMTEKQGGSDLRQTRTTATRAGD-SWRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQ 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              +DGS N +  QRLK+K+GNRSNA+ E+EF      ++G        + +M  L  L+
Sbjct: 238 GWRDDGSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLE 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + + MR + + A+H+A  R      LIDQP+M+  +AD+AL+  AA  L+ R A +
Sbjct: 298 CALGAAALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAA 357

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A     EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE  IAR YRE+P 
Sbjct: 358 TDAAARNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPL 417

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
           N +  G+GN + LDVL  L +       L + L    G+  +   +I  +   +   +  
Sbjct: 418 NGVWEGAGNVICLDVLRALTRTPEAAAALAAELAPARGADTALDALIAGVEAMLERPESA 477

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           + +AR L E +ALA SAA L R     +A+ F+  R 
Sbjct: 478 EPVARRLVEHLALALSAALLLRHAPAAVAERFIAARI 514


>gi|148260040|ref|YP_001234167.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146401721|gb|ABQ30248.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 547

 Score =  362 bits (930), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 183/517 (35%), Positives = 273/517 (52%), Gaps = 9/517 (1%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANY 79
           +    NQ       +A++ D+ L+  ++ F +      L  +G  + S   + LAR AN 
Sbjct: 4   THEVFNQAGEPPAHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANR 63

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L A+   G R D+V FHPAWH L+     D  H   W        R  AH  RAA 
Sbjct: 64  NPPELAAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWTEP-----RPGAHVARAAV 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            YL  Q E G     ++T A+  AL   P +   +  +I +  YDP    P +K+++ + 
Sbjct: 119 AYLWGQGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKSALGVA 178

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TEK+GG+D+    +      D  + L+GHKWF S P SD F+ LA+    + CFL  
Sbjct: 179 MAMTEKQGGSDLRQTRTTATHAGD-SWRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQ 237

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              +DGS N +  QRLK+K+GNRSNA+ E+EF      ++G        + +M  L  L+
Sbjct: 238 GWRDDGSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLE 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + + MR + + A+H+A  R      LIDQP+M+  +AD+AL+  AA  L+ R A +
Sbjct: 298 CALGAAALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAA 357

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A     EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE  IAR YRE+P 
Sbjct: 358 TDAAAHNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPL 417

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
           N +  G+GN + LDVL  L +       L + L    G+  +   +I  +   +   +  
Sbjct: 418 NGVWEGAGNVICLDVLRALTRTPEAAAALAAELAPARGADTALDALIAGVEAMLERPESA 477

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
           + +AR L E +ALA SAA L R     +A+ F+  R 
Sbjct: 478 EPVARRLVEHLALALSAALLLRHAPAAVAERFIAARI 514


>gi|325519771|gb|EGC99075.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 424

 Score =  356 bits (913), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 159/428 (37%), Positives = 236/428 (55%), Gaps = 12/428 (2%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S     LA  AN + P+ + +   G R D+VEFHPAWHALL    + G     +      
Sbjct: 1   SAETARLADEANRHPPEPNIFDRRGRRIDRVEFHPAWHALLGLYRNQGFVSLAFRD---- 56

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R       AA  YL  Q+EAG L   ++T A++  L   P +      +++S +YDP 
Sbjct: 57  -ARPGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWALLRDRLYSDDYDPR 115

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDA 242
           +     K S+  G+G+TEK+GG+D+ A T+    +      G Y L GHKWF S+PM DA
Sbjct: 116 DVPIADKRSIWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDA 175

Query: 243 FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +++A+ E G   CF VPR   DG+ N +  QRLKNK+GNRSN++ E+E ++ +G +LGD
Sbjct: 176 HLVVARTEAGSPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGD 235

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +M     L+  + S + +R  + +AI Y R+RH  G  L +QP+M+  +AD
Sbjct: 236 EGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLAD 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL+  AA  L+ RLA++F+       E A+ RI+ P  K+W CK A  +  E ME  GG
Sbjct: 296 LALESEAALVLAMRLADAFER-DDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGG 354

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +GY+++  IAR +RE+P NSI  GSGN M LDVL  + +  +    L + L  DLG+   
Sbjct: 355 NGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAELS-DLGAGEP 413

Query: 482 KVITILRD 489
           ++   L  
Sbjct: 414 RIRAALDA 421


>gi|154245212|ref|YP_001416170.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154159297|gb|ABS66513.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 545

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 204/534 (38%), Positives = 296/534 (55%), Gaps = 7/534 (1%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M+  H    +    NQPP +  +N  + D  L A                G         
Sbjct: 1   MDFTH---LADEVSNQPPPYGDINLAAGDPALAAASERAGMNGGAF--AFGGQWGGSDQL 55

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            L R+AN N P+LH++ P G R D VEFHPA+HAL+ +S+  GLHCS WD    P   ++
Sbjct: 56  ALGRLANENPPELHSHDPQGRRCDVVEFHPAYHALMAQSMDAGLHCSSWDGPARPAEARR 115

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            +  RA RLY+++Q+EAGH+   ++T A+  +L   P + +D+ P+I +R YD       
Sbjct: 116 GNAQRATRLYVVSQVEAGHVCPLTMTHAAPASLAAAPELLRDFLPRIRARNYDGRFVPFW 175

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
           +K SV IG+ +TE++GGTD+ + T+Q   I    Y ++G KWFLS+PMSDAF++LAQ  G
Sbjct: 176 EKASVTIGMSMTERQGGTDVRSNTTQAVPIGGSEYEITGAKWFLSAPMSDAFLVLAQAPG 235

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+PR   DGS NG+   RLK K+GNRSNA+ E+EF   F + +G+       +  
Sbjct: 236 GLTAFLMPRFRPDGSVNGVRLTRLKRKLGNRSNASCEVEFERAFAWRVGEEGRGIPTIIG 295

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  LD A+ S   MR +LA A+H+AR R      L+DQP M   +AD+ALD  A  A
Sbjct: 296 MVQMTRLDCAVSSAGLMRAALARALHHARHRTAFQKKLVDQPAMAMVLADLALDQEAFAA 355

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L+FRLA SFDEA     EAA+AR++ P+ K+  CK APA IAE ME +GG+GY+E+ ++ 
Sbjct: 356 LAFRLALSFDEANGSGTEAAHARVLTPVAKFAVCKAAPAFIAETMEVLGGNGYVEDCALP 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-EQDLGSSGKKVITILRDS 490
           R YRE+P N+I  GSGN M LD+  +  +  +L + + + L E+  G  G          
Sbjct: 416 RLYREAPVNAIWEGSGNVMALDLARVAFREPDLVQAILANLKERTRGLPGAASTAETVSR 475

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                + +  AR   E +AL ++AAAL  +    + + F   R        +  
Sbjct: 476 CLQSGDREAHARRAAEALALLAAAAALAESAPTAVTEAFAATRLA-TARGIYGA 528


>gi|121602440|ref|YP_989126.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis
           KC583]
 gi|120614617|gb|ABM45218.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis
           KC583]
          Length = 541

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 162/544 (29%), Positives = 294/544 (54%), Gaps = 15/544 (2%)

Query: 25  LNQPPLFIG--MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
           +N P +  G   NA+ SD+L++ + +  P  + +  + +G +V S  A +L+R+AN + P
Sbjct: 1   MNDPFMQSGRRKNAFFSDTLMLRVASTLPESLLENFQEVGAFVASREAWDLSRLANRHRP 60

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            LH     G+R +++E HP+++ L R S   GL  S+W+        +  ++ RA RL L
Sbjct: 61  VLHHNNEWGQRIEQLEMHPSYYTLQRYSRQMGLVSSLWENITVENGVR--YQARAIRLIL 118

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A LE GHL    +TSA++  L+    + K W   + SR+YD ++K    K   ++    
Sbjct: 119 SAGLETGHLNEVVITSAAIAVLVGNSELFKRWQNVLLSRQYDFSSKPIHHKKGASLSCAF 178

Query: 203 TEKR------GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            +            +A   S  +KI   +Y L+  K  + +P++D +++ A+++GR+ CF
Sbjct: 179 DDIEESRKHFSSFSMAQKISFDEKIGCDLYNLNITKTNVVNPIADGYLVSAEIDGRLNCF 238

Query: 257 LVPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            VPRL E+G  NG+   + L  + G  S     ++F N++G+LLG++   T  ++D++ +
Sbjct: 239 FVPRLQENGELNGIISVRHLIQRSGEHSVPEGSVDFQNSYGWLLGNIGEGTKIIKDVETM 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +  D +++S   +R +L   I + R+  +    L   P+ +R  +DIALDIAA+ AL FR
Sbjct: 299 VRFDQSVISAGVLRAALQFGIDFFRQ-KMPNQPLP--PLTERIFSDIALDIAASQALVFR 355

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           LA +FD A +   EAA+A IM PI  Y   ++   +I E +  +G   +IE   +++  R
Sbjct: 356 LAWAFDNAVNDRSEAAFAHIMTPIVAYHVNQLVIPIIGEIIAQLGLESFIEGNPLSQMLR 415

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  A  IL  + N +V D + ++ K   LF++L   +  D+G +G + I I++ +  +  
Sbjct: 416 DGSA-RILRNNANQLVKDAILIVNKAPGLFQKLLEKIATDIGPAGPRAIEIIKSAAQMAS 474

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            ++G  RF  E++A A +AA+L    M+ + + ++E+R      S++ M+  R+N   ++
Sbjct: 475 TNEGAGRFFVEQVAYAGAAASLRCKKMDYVVNAYMESRLGGQWRSSYGMMIARYNPLELL 534

Query: 556 DSLY 559
           + LY
Sbjct: 535 NILY 538


>gi|319898953|ref|YP_004159046.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73]
 gi|319402917|emb|CBI76468.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73]
          Length = 542

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 163/533 (30%), Positives = 289/533 (54%), Gaps = 12/533 (2%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN   P L      G+ 
Sbjct: 12  KNAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSYRPTLRYNNGWGQP 71

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++++ HP++H L R S   GL  S+W+ +      +  ++ RA RL L+A LE GHL  
Sbjct: 72  KEELDIHPSYHTLQRYSRQAGLVASLWENTTSENGVR--YQARAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
             V SA++  L+    + K W   + SR+YD ++KA   K   ++          ++   
Sbjct: 130 IIVASAAIAVLIGDVELFKKWKDMLLSRQYDLSSKAIDNKKGASLTYAFDNIEESEKYAL 189

Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           ++ A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFLVPR+ E+G  
Sbjct: 190 NVPAVQRISFDEKMGRDLYRLNIIKTQVINPMADGYIVSAEIDGLLSCFLVPRMQENGLL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG+   R L  + G  S     +EF +  G+LLG++      ++D++ ++  D AI+S  
Sbjct: 250 NGIILVRYLIQRSGEYSAPEGVVEFRDCCGWLLGNIGEGAKVIKDIETMMRFDQAIISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  +I++ R+  +        P+ +R  ADIALDIAA+ AL  RLA +FD A S 
Sbjct: 310 VLRAALQFSINFLRQ-KMLNQPFP--PLTERIFADIALDIAASQALVMRLARAFDNAASN 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI      ++   ++ E +  +G   +++   + +  R+SPA  +    
Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIVGEIIAQVGIESFMDNNPLLQILRDSPARIVKNSG 426

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF  E
Sbjct: 427 VNQLVKDAILIGDKAPGLFQQLLEKISADIGPAGPRAIEIIKSAVNMASTNEGAGRFFVE 486

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A AS++AAL    +  + + ++E+R      S++ ML  R+N A ++D LY
Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYNPAQLLDVLY 539


>gi|319404281|emb|CBI77874.1| acyl-CoA dehydrogenase [Bartonella rochalimae ATCC BAA-1498]
          Length = 542

 Score =  345 bits (886), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 162/536 (30%), Positives = 285/536 (53%), Gaps = 12/536 (2%)

Query: 31  FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
               NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + P+LH     
Sbjct: 9   LQRKNAFLSDTLMFRIASTLPTSLLASFEEIGTFVASDEAWDLARLANSHRPRLHYNNRW 68

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            +  ++++ HP++H L R S   GL  S+W+ +      +  ++ RA RL L+A LE GH
Sbjct: 69  KQSKEELDIHPSYHNLQRYSRQAGLVSSLWESATSENGVR--YQARAIRLALLAGLETGH 126

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KR 206
           L   +V SA++  L+    + K W   + SR+YD ++K    KT  ++          ++
Sbjct: 127 LNEITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNKTGASLTCAFDNIEESEK 186

Query: 207 GGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PRL E+
Sbjct: 187 YTFNFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQEN 246

Query: 265 GSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           G  NG    R L  + G  S     +EF    G+LLG++      ++D++ ++  D AI+
Sbjct: 247 GLLNGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAII 306

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   +R +L  +I + R+  +        P+ +R  ADIALDIAA+ AL  RLA +FD A
Sbjct: 307 SAGVLRSALQFSIDFLRK-KMPNQPFP--PLTERIFADIALDIAASQALVMRLARAFDNA 363

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAA+ARIM PI      ++   ++ E +  +G   + +   + +  R+SPA  + 
Sbjct: 364 VDNRSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIVK 423

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
               N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF
Sbjct: 424 NSGMNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGRF 483

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
             E++A AS++AAL    +  I + ++E+R      S++ ML  R+N   ++D LY
Sbjct: 484 FVEQMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539


>gi|49474242|ref|YP_032284.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse]
 gi|49239746|emb|CAF26128.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse]
          Length = 598

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 162/561 (28%), Positives = 297/561 (52%), Gaps = 16/561 (2%)

Query: 6   IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYV 65
           +Y    +N  + P  ++FA N        NA+ SD+L+  + +  P+ +    E +G++V
Sbjct: 44  VYDMNNLNNRNMPMSAVFAQN----VRRKNAFLSDTLMFRIASTLPTFLLASFEEIGDFV 99

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
            S  A EL+ +AN   P L      G   +K+E H ++ AL + +   GL  S+W+ +  
Sbjct: 100 ASREAWELSYLANRYRPVLRYNNEWGRPTEKLEIHSSYQALQQYARQIGLVTSLWENTTS 159

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
               +  ++ RA RL L A LE GHL    +TSA +  L++   + K W   + SR+YD 
Sbjct: 160 ENGVR--YQARAIRLALSASLETGHLNEIVITSAVIAVLISDIELFKKWQNVLLSRQYDL 217

Query: 186 TNKAPMQKTSVAIGLGLTE----KRGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPM 239
           ++K   +K + ++     +    ++   +   +   S  +K+   +Y L+  K  + +P+
Sbjct: 218 SSKPVNRKKAASLTCAFDDVEKYEKHSFNFQNVKKISFDEKMGRDLYRLNVVKTNVINPI 277

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            D +++ A+++G + CF VPR+ E+G+ NG +  + L  + G  S     ++F  ++G+L
Sbjct: 278 VDGYLVSAELDGHLSCFFVPRMQENGTLNGSISIRHLVQRSGEVSAPEGVVDFQGSYGWL 337

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+       ++D++ ++  D +++S   +R +L   I + R+  +    L   P+ +R 
Sbjct: 338 LGNAGEGLKVIKDIETMMRFDQSVISAGVLRAALQFGIDFFRQ-KMPNQPLP--PLTERI 394

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            ADIALDIAA+  L  RLA +FD A +   EAA+ARIM PI  Y   ++A  +I E +  
Sbjct: 395 FADIALDIAASQVLVLRLARAFDNAANDHSEAAFARIMTPIIAYHVSQLAVPIIGEIIAQ 454

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +G   +IE   +++     PA  I   S N +V D + + EK   LF++L   +  D+G 
Sbjct: 455 VGIESFIEGNPLSQILCNGPARIIRNTSANQLVKDAILIAEKAPGLFQKLLEKIAIDIGP 514

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           +G + + I+R ++ +   ++G  RF  E++A A++AA+L    +  +A+ ++E+R     
Sbjct: 515 AGPRAVEIIRSAVEMASANEGAGRFFIEQVAYAAAAASLRSTKIEHVANAYMESRLGGQW 574

Query: 539 HSTHCMLHGRFNAAHIIDSLY 559
            S++ ML  R+NA H+++ LY
Sbjct: 575 RSSYGMLIARYNAGHLLNVLY 595


>gi|319407286|emb|CBI80927.1| acyl-CoA dehydrogenase [Bartonella sp. 1-1C]
          Length = 542

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 162/536 (30%), Positives = 284/536 (52%), Gaps = 12/536 (2%)

Query: 31  FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
               NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + PQLH     
Sbjct: 9   LQRKNAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSHRPQLHYNNRW 68

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            +  ++++ HP++H L R S   GL  S+W+ +      +  ++ RA RL L+A LE GH
Sbjct: 69  KQSKEELDIHPSYHTLQRYSRQAGLVSSLWESATSENGVR--YQARAIRLALLAGLETGH 126

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KR 206
           L   +V SA++  L+    + K W   + SR+YD ++K    K   ++          ++
Sbjct: 127 LNEITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNKIGASLTCAFDNIEESEK 186

Query: 207 GGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PRL E+
Sbjct: 187 YTFNFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQEN 246

Query: 265 GSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           G  NG    R L  + G  S     +EF    G+LLG++      ++D++ ++  D AI+
Sbjct: 247 GLLNGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAII 306

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S   +R +L  +I + R+  +        P+ +R  ADIALDIAA+ AL  RLA +FD A
Sbjct: 307 SAGVLRSALQLSIDFLRK-KMPNQPFP--PLTERIFADIALDIAASQALVMRLARAFDNA 363

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAA+ARIM PI      ++   ++ E +  +G   + +   + +  R+SPA  + 
Sbjct: 364 VDNRSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIVK 423

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
               N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF
Sbjct: 424 NSGMNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGRF 483

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
             E++A AS++AAL    +  I + ++E+R      S++ ML  R+N   ++D LY
Sbjct: 484 FVEQMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539


>gi|319405724|emb|CBI79347.1| acyl-CoA dehydrogenase [Bartonella sp. AR 15-3]
          Length = 542

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 157/533 (29%), Positives = 287/533 (53%), Gaps = 12/533 (2%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            NA+ SD+L+  + +  P+ +    E +G +V S  A +LAR+AN + P LH      + 
Sbjct: 12  KNAFLSDTLMFRIASTLPTSLLPSFEEIGAFVASDEAWDLARLANSHRPTLHYNNRWRQS 71

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++++ HP++H L R S   GL  S+W+ +      +  ++ RA RL L+A LE GHL  
Sbjct: 72  KEELDIHPSYHTLQRYSRQAGLVSSLWENTTSENGVR--YQARAIRLALLAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209
            +V SA++  L+    + K W   + SR+YD ++++   K   ++          ++   
Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSRSIENKRGASLTCAFDNIEESEKYTF 189

Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A+   S  +K+   +Y L+  K  + +PM+D +I+ A+++G + CFL+PR+ E+G  
Sbjct: 190 NFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRIQENGLL 249

Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           NG+   R L  + G  S     +EF   +G+L+G++      ++D++ ++  D AI+S  
Sbjct: 250 NGVILTRYLIQRSGEYSAPEGVIEFRGCYGWLVGNIGEGAKVIKDIETMMRFDQAIISAG 309

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L  +I + R++  +       P+ +R  ADIALDIAA+ AL  RLA +FD A   
Sbjct: 310 VLRSALQFSIDFLRKQTPN---QPFPPLTERIFADIALDIAASQALVMRLARAFDNAADN 366

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA+ARIM PI      ++   +I E +  +G   + +   + +  R+SPA  +    
Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIIGEIIAQVGIVSFTDSNPLLQILRDSPARIVKNSG 426

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            N +V D + + +K   LF+QL   +  D+G +G + I I++ ++++   ++G  RF  E
Sbjct: 427 VNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASVNEGAGRFFVE 486

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           ++A AS++AAL    +  + + ++E+R      S++ ML  R++   ++D LY
Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYSPTQLLDVLY 539


>gi|289675783|ref|ZP_06496673.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 384

 Score =  340 bits (872), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 155/390 (39%), Positives = 217/390 (55%), Gaps = 10/390 (2%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D VEFHPA+H L+  +I  G+    W        +  AH  RAA  YL  Q + G    
Sbjct: 1   IDLVEFHPAYHQLMSAAIEHGIPSLPWT-----YPQPGAHVARAAMSYLHTQADPGSGCP 55

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++T AS+ AL   P + + W PK+ S EYDP N     K    IG+ +TEK+GGTD+ A
Sbjct: 56  LTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTEKQGGTDVRA 115

Query: 214 ITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            T++   +  G     Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR   D + N 
Sbjct: 116 NTTRAFPVGAGSPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPRHRPDDTRNE 175

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              QRLKNK+GN SNA+ E+EF     +++G+       + +M  +   D  I S + MR
Sbjct: 176 FYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMR 235

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L +A H+   R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + D  +    E
Sbjct: 236 QALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHE 294

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS   GSGN 
Sbjct: 295 KRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNV 354

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
             LDVL  L K     + LF  L    G  
Sbjct: 355 QCLDVLRTLSKEPGALDALFDELGDGHGDR 384


>gi|333007687|gb|EGK27164.1| protein aidB [Shigella flexneri VA-6]
          Length = 405

 Score =  339 bits (871), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 141/385 (36%), Positives = 210/385 (54%), Gaps = 1/385 (0%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +A+ + L   P   +DW   + S  YD       QK  + IG+G+TEK+GG+D+ + 
Sbjct: 1   MTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSN 60

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T + +++ DG Y L GHKWF S P SDA ++LAQ  G + CF VPR L DG  N +  +R
Sbjct: 61  TIRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLER 120

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           LK+K+GNRSNA+ E+EF +  G+LLG        +  M  +   D A+ S + MR + + 
Sbjct: 121 LKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSL 180

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI++A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA ++D  ++ ++EA +AR
Sbjct: 181 AIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDR-RADAKEALWAR 239

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +  P  K+  CK     +AEAME +GG GY EE  + R YRE P NSI  GSGN M LDV
Sbjct: 240 LFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDV 299

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           L +L K   +++ L     +  G        + R    L K  + L R +T ++ L    
Sbjct: 300 LRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCG 359

Query: 515 AALYRAGMNDIADVFLENRFLDNCH 539
           A + +     +A  + +        
Sbjct: 360 AQMLKYASPPMAQAWCQVMLDTRGG 384


>gi|308188260|ref|YP_003932391.1| acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1]
 gi|308058770|gb|ADO10942.1| Putative acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1]
          Length = 433

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 147/407 (36%), Positives = 223/407 (54%), Gaps = 11/407 (2%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANY 79
           +    NQP      N + SD+ L   ++   +    E L  +G  + S  + EL R+AN 
Sbjct: 5   THTVFNQPHPLSNSNLFLSDTPLGEALSREGAGWDGEWLASVGRQLGSAESLELGRLANA 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L  Y   G R D+V FHPAWH L++      LH   W    +P VR+QA   RAAR
Sbjct: 65  EPPELLRYDARGVRLDEVRFHPAWHLLMQGVCASRLHNLSW----QPTVREQASVARAAR 120

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             L AQ++AG L   ++T A++  L    P   + W   + S  YD   +   QK  + I
Sbjct: 121 FILHAQVDAGTLCPVTMTHAAIPLLQAYLPAAFESWLDPLLSDRYDTHAQPGDQKRGLLI 180

Query: 199 GLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           G+G+TEK+GG+D+   T++ + +        + L+GHKWF S+P SDA ++LAQ    + 
Sbjct: 181 GMGMTEKQGGSDLLTSTTRAEPLGARGPGEAWRLTGHKWFFSAPQSDAHLVLAQTPEGLS 240

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           CF +PRLL DGS N +  ++LK+K+GNRSNA+ E+EF +  G+LLG+       +  M  
Sbjct: 241 CFFLPRLLPDGSRNAIQLEQLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMAG 300

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   D A+ S   MR + + A+ +A +R V G  L+DQP+M++ +A  AL +   TAL  
Sbjct: 301 MTRFDCALGSHGQMRRAFSVALWHAHQRQVMGKNLVDQPLMRQVLAQQALQLEGQTALLM 360

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           RLA ++ +  ++  E A+AR+  P  KY  CK     +AE+ME +G 
Sbjct: 361 RLARAWSQP-AKPHEVAFARLFTPAAKYVICKAGAPFVAESMEVLGA 406


>gi|49475586|ref|YP_033627.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1]
 gi|49238393|emb|CAF27620.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1]
          Length = 598

 Score =  329 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 294/561 (52%), Gaps = 16/561 (2%)

Query: 6   IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYV 65
           +Y    +N  + P   + A N        NA+ SD+L+  + +  P+ +    E +G++V
Sbjct: 44  VYDMNDLNNRNMPMSGVLAQN----SRRKNAFLSDTLMFRIASTLPTFLLASFEEIGDFV 99

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
            S  A ELA +AN   P L      G+  +K+E H ++ AL + S   GL  S+W+ +  
Sbjct: 100 ASRKAWELASLANRYRPMLRYNDEWGKPTEKLEIHSSYKALQQYSRQAGLVTSLWENTSS 159

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
               +  ++ RA RL L A LE GHL    +TSA++  L++   + K W   + SR+YD 
Sbjct: 160 ENGIR--YQARAIRLALSASLETGHLNEVIITSAAIAVLISDVELFKKWQNALLSRQYDL 217

Query: 186 TNKAPMQKTSVAIGLGLTE----KRGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPM 239
           ++K    K + ++     +    ++   +  ++   S  +K+   +Y L+  K  + +P+
Sbjct: 218 SSKPVNSKKAASLTCAFDDFEKHEKHSFNFPSVKKISFDEKMGRDLYRLNVVKTNVINPI 277

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            D +++ A+++G + CFLVPR+ E+G+ NG +  + L  + G  S     +EF  + G+L
Sbjct: 278 VDGYLVSAELDGHLSCFLVPRMQENGALNGSISIRHLILRSGETSTPEGIVEFQGSCGWL 337

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+       ++D++ ++  D +++S   +R +L  AI + R+  +    L   P+ +R 
Sbjct: 338 LGNAGEGIKVIKDIETMMRFDQSVVSAGVLRAALQFAIDFFRQ-KMPNQPLS--PLTERI 394

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            ADIALDIAAA AL  RLA +FD A +   EAA+ARIM PI  Y   ++   +I E +  
Sbjct: 395 FADIALDIAAAQALVLRLARAFDNAANDRSEAAFARIMTPIIAYHVSQLVVPIIGEIIAQ 454

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +G   +IE+  +++     PA  +   S N +V D + + EK   LF++L      D+G 
Sbjct: 455 LGIESFIEDNPLSQMLCNGPARIVRNTSANQLVKDAILIAEKAPGLFQKLLEKTALDIGP 514

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           +G + I I++ +  +   ++G  RF  E++A A +AA+L    +  +A  ++E+R     
Sbjct: 515 AGPRAIEIIKSAAEMASANEGAGRFFVEQVAYAVAAASLRSTDIEHVASAYMESRLGGQW 574

Query: 539 HSTHCMLHGRFNAAHIIDSLY 559
            S++ ML  R+NA  +++ LY
Sbjct: 575 RSSYGMLIARYNAGLLLNVLY 595


>gi|222874481|gb|EEF11612.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score =  327 bits (839), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 181/357 (50%), Positives = 256/357 (71%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M+ P + + WAP++ +R+YD  N+   QK  V +G+G+TEK+GGTD+ A T++ +   +G
Sbjct: 1   MSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGMTEKQGGTDVRANTTRAEPAGEG 60

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +Y L+GHKWF+S+PMSD F++LAQ E  + CFL+PR+ +DG+ NG  +QRLK+K+GNRSN
Sbjct: 61  LYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVTDDGATNGFRFQRLKDKLGNRSN 120

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           A+ E+EF    G+L+G+       + DM  L  LD A+ S   MR +LAEA+H+AR R V
Sbjct: 121 ASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCALASSGLMRAALAEAVHHARHRSV 180

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L +QP+M R +AD+ALD+AAATAL+FRLA SFDEA +   EAAYAR+M P+TKYW 
Sbjct: 181 FGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDEAANGRAEAAYARVMTPVTKYWV 240

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           CK+APAVI EAMEC+GG+GY+EE  +AR+YRE+P N+I  GSGN M LDVL +L +   L
Sbjct: 241 CKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAIWEGSGNVMALDVLRVLSRNAGL 300

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           F+ +   +  DLG +G   + +L  ++ +C+ D+G  R LTE++ALA++AA L R G
Sbjct: 301 FDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGRILTEQLALAAAAAELKRLG 357


>gi|212640554|ref|YP_002317074.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212562034|gb|ACJ35089.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 379

 Score =  325 bits (834), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      +  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RDIFNKMAELGLTGIPWPEEYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +    T +  + +   + + E                  GL+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGTEQQKQTYLRALATGE-------------KLGAYGLSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D++A+ ++  +  D         W  +   +D +++ A  +       +   + +    G
Sbjct: 133 DVSAMKTRAVRDGDHYVLNGSKVWITNGGEADIYVVFAVTDPEKKHRGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSIGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGEEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAVEYAKGRVQFGKPIAEQQGIAFKLADMATAIEAARLLTYQAAWLESNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A A       K +    A  V  EA++  GG GY ++  + R  R++    I 
Sbjct: 310 LPYGKESAMA-------KLFAGDTAMKVTVEAVQIFGGYGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +  +L K
Sbjct: 363 EGTQEIQRIVISRMLTK 379


>gi|264679498|ref|YP_003279405.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210011|gb|ACY34109.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 569

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 141/535 (26%), Positives = 237/535 (44%), Gaps = 41/535 (7%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G N Y++D  L +L+A     +  + +   L+ +GE        ELA +A+ N P
Sbjct: 23  VPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGELAGGR-IDELAGVADRNPP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            L      G+   ++  HPA+  L R +  + GL              K    ++ A  +
Sbjct: 82  TLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDMLGWSGKMPPIVKYALTF 141

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     S+T +    L    TP +   + P++ S +++   +  M        
Sbjct: 142 LFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLPQLLSLDWEKQAQGAMF------- 194

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253
             +TE+  G+DIA   +     +DG + L+G KWF S+P ++  ++LA+VEG       +
Sbjct: 195 --MTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCSNPDAEFAMVLARVEGGAPGMKGI 252

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+PR L+DGS N     RLK+K+G +S A+ E+       +L+G+       + DM 
Sbjct: 253 SLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIRMDGAVAYLVGEQGRGFVQMADMV 312

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S   MR ++AEA   A  R   G  L   P+M+R +  + +    A  + 
Sbjct: 313 NNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLEQMPLMQRQLDKLRVPAEQARTMV 372

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F+ A +   + +   +A A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R
Sbjct: 373 FQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWSDPR 432

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDS 490
             R++   SI  G+ N + LDV+  +++  +L   +Q    L         +++   R +
Sbjct: 433 LVRDAHLGSIWEGTSNIVALDVIRAIKREGSLPVLQQYLHGLL-----DHARLVPGYRQA 487

Query: 491 ISLCKEDKGLARFLTEKIA------LASSAAALYRAGMNDIADVFLENRFLDNCH 539
           +   ++    A  L ++ A      LA  AA         IA  +   +   N  
Sbjct: 488 L---EDALARASILADRAARDGGEVLARQAATALYNCTTAIAMAWEAAQTGSNER 539


>gi|163855144|ref|YP_001629442.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258872|emb|CAP41171.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 562

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 142/524 (27%), Positives = 241/524 (45%), Gaps = 28/524 (5%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQEL 73
           S +  A    P   G+N +S+D    +L A +      + +   LE LG          L
Sbjct: 2   SPTSSATTDVPDSRGLNLFSADPYAASLCALYLPPDLHAHLLPHLERLGALAGGH-IDAL 60

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF---EPVVRK 130
           A +A+ N P L      G+   +V  HPA+  L R +  +    ++  R      P    
Sbjct: 61  AAVADQNPPTLSVRNRAGQDESRVHKHPAYVELERLAYSEFGLAALSHRGGVLDWPAPMP 120

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A K   + L++ A+      +S + + A  +     P + +   P++ S+++D   +  
Sbjct: 121 PAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDELRQGA 180

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M          +TE+  G+D++A T++ +  +DG + L G KWF S+P +   ++LA+ E
Sbjct: 181 MF---------MTEQGAGSDVSATTTRAEPQADGTWRLHGDKWFCSNPDAGFAMVLARSE 231

Query: 251 GRVGCFLV-----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
              G   V     PR L DG+ N     RLK+K+G RS A+ E+       +L+G+    
Sbjct: 232 DMPGLKGVSLFLLPRDLPDGTHNAYRILRLKDKLGTRSMASGEIRLEGALAWLVGERGKG 291

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + DM     L + + +   MR ++ EAI++A+ R   G  LID P+M+R +A + + 
Sbjct: 292 FKHMADMINNSRLSNGMRAAGLMRRAVTEAIYFAQHRRAFGKRLIDMPLMRRQLAKMNVW 351

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
              A ++ F+ A +  +A+  ++ AA ARI+ P+ K+  C+ A  V  + ME  GG GYI
Sbjct: 352 AEQARSVMFQTAAALADAEQNADAAALARILTPLIKFRACRDARKVTGDGMEVRGGCGYI 411

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE   AR  R++   SI  G+ N + LDVL  ++K   L   +       L   G+    
Sbjct: 412 EEFVEARLVRDAHLGSIWEGTSNIVALDVLRAIQKTDAL--AVLRRHVDSLLQDGEPCAP 469

Query: 486 ILRDSISLCKEDK-GLARF--LTEKIALASSAAALYRAGMNDIA 526
            L D+ +   +    LA    L ++  LA  AA+     ++  A
Sbjct: 470 ALADTQARALDGAFALADHAALQDRPDLARQAASALYHALSLAA 513


>gi|299530574|ref|ZP_07043994.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721550|gb|EFI62487.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 569

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 146/551 (26%), Positives = 246/551 (44%), Gaps = 42/551 (7%)

Query: 13  NQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVL 66
           +QVH  + ++ A   P P   G N Y++D  L +L+A     +  + +   L+ +GE   
Sbjct: 7   SQVHVMAQAVRAAAHPVPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGELAG 66

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
                ELA +A+ N P L      G+   ++  HPA+  L R +  + GL          
Sbjct: 67  GR-IDELAGVADRNPPTLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDML 125

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
               K    ++ A  +L  Q E G     S+T +    L    TP +   + P++ S ++
Sbjct: 126 GWSGKMPPIVKYALTFLFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLPQLLSLDW 185

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           +   +  M          +TE+  G+DIA   +     +DG + L+G KWF S+P ++  
Sbjct: 186 EKQAQGAMF---------MTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCSNPDAEFA 236

Query: 244 IMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++LA+VEG       +  FL+PR L+DGS N     RLK+K+G +S A+ E+       +
Sbjct: 237 MVLARVEGGAPGMKGISLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIRMDGAVAY 296

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+       + DM     L + + S   MR ++AEA   A  R   G  L   P+M+R
Sbjct: 297 LVGEQGRGFVQMADMVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLEQMPLMQR 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAM 416
            +  + +    A  + F+ A +   + +   +A A  RI+ P+ K+  C+ A  V  +AM
Sbjct: 357 QLDKLRVPAEQARTMVFQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDARKVTGDAM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQ 474
           E  GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L   +Q    L  
Sbjct: 417 EVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAIKREGSLPVLQQYLHGLL- 475

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA------LASSAAALYRAGMNDIADV 528
                  +++   R ++   ++    A  L ++ A      LA  AA         IA  
Sbjct: 476 ----DHARLVPGYRQAL---EDALARASILADRAARDGGEVLARQAATALYNCTTAIAMA 528

Query: 529 FLENRFLDNCH 539
           +   +   N  
Sbjct: 529 WEAAQTGSNER 539


>gi|319408538|emb|CBI82191.1| acyl-CoA dehydrogenase [Bartonella schoenbuchensis R1]
          Length = 541

 Score =  323 bits (828), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 150/532 (28%), Positives = 277/532 (52%), Gaps = 11/532 (2%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            NA+ SD+L+  + +N P+ +    E +G +V S  A++L+R+AN++ P L       + 
Sbjct: 12  KNAFLSDTLMFRIASNLPASLLASFEEIGAFVASHEARDLSRLANHHRPILRYNTEWSQL 71

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            +++E HPA+  L R S   GL  S+W+        +  ++ RA RL L A LE GHL  
Sbjct: 72  TEQLEIHPAYDTLQRYSRQVGLSTSLWENIASESGIR--YQARAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR------G 207
             +TSA++  L+   ++ K W   + SR+YD + K    K   ++               
Sbjct: 130 VIITSAAIAVLIGDIKLFKRWRNVLLSRQYDSSLKPIDDKKGASLTCAFDNVAKSEKYPS 189

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
              IA   S  +K+   +Y L+  K  + +P++D +++ A+++G + CFLVPR+ E+G+ 
Sbjct: 190 SFPIAQKVSFDEKMGRDLYHLNSVKTNVINPVADGYLVSAEIDGHLSCFLVPRVQENGAI 249

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    L  + G  S     + F  ++G+LLG++      ++D++ +   D +++S   
Sbjct: 250 NNISIHYLLQRSGEYSVPEGVVHFQGSYGWLLGNIGEGAKIIKDIETMTRFDQSVISTGV 309

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +R +L   I + R+  +    L   P+ +R  ADIALDIAA+ AL  RLA +FD A +  
Sbjct: 310 LRAALQFGIDFFRQ-KMPNQPLP--PLTERIFADIALDIAASQALVLRLARAFDNATNSR 366

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA+ARIM PI      ++   +++E +  +G   ++E   +++   +  A  +     
Sbjct: 367 AEAAFARIMTPIIACHVNQLVVPIVSEIIAQLGLESFVEGNPLSQMLHDGSARIVRNNDS 426

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           N +V D + +  K   LF+QL   +  ++GS+G + + I++ +I +   ++G  RF  E+
Sbjct: 427 NQLVRDAILIANKAPGLFQQLLEKIATNIGSAGPRAVEIIKSAIHMASTNEGAGRFFVEQ 486

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           +A A++ A+L    M  I + ++E+R       ++ M+  R+N   +++ LY
Sbjct: 487 VAYAAATASLRYKEMEYIVNAYMESRLGGQWRLSYGMMIARYNPGQLLEILY 538


>gi|270159432|ref|ZP_06188088.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae
           D-4968]
 gi|289165758|ref|YP_003455896.1| acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269987771|gb|EEZ94026.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae
           D-4968]
 gi|288858931|emb|CBJ12856.1| putative acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 562

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 133/533 (24%), Positives = 220/533 (41%), Gaps = 46/533 (8%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIAN-FPSV----VHKELELLGEYVLSCTAQELARMANY 79
             Q P  +G N Y  D +L A +    P      +  EL  LG+  +    Q L + A  
Sbjct: 4   FFQTPPCLG-NQYDDDRILKAYLEWKLPPSMLTEIQPELHHLGQRAIEDIYQ-LGQEAEA 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+   Y P G+R D +E   AW  L + S  + L    ++R      R      + A+
Sbjct: 62  YPPKHIPYDPWGKRIDHIEVSRAWKELDKISAEEKLIAIGYERRHGAFSRIH----QFAK 117

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +YL     A +    ++T  +  AL       + +A K       P   +         G
Sbjct: 118 IYLFHPSSAIYTCPLAMTDGAARAL-------ELYADKPLKHRVLPHLISSDPTQFWTSG 170

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258
             +TE+ GG+D++  ++  +      + L+G KWF S+  S   + LA++EG   G   +
Sbjct: 171 QWMTERTGGSDVSGTSTTAKPEG-TYFLLNGDKWFTSATTSQIAMTLARIEGAPEGSKGL 229

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
                +     G  NG+   RLK+K+G R+  T EL   NT   L+G        +  + 
Sbjct: 230 SLFYLELRDQMGKLNGISINRLKDKLGTRALPTAELTLKNTRALLIGGAGDGVKKISSLF 289

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  + +A  +V  MR ++A A  YA +R   G  L    +    +A++ ++  AA  L 
Sbjct: 290 NITRIYNACCAVGYMRRAIALARDYATKRVSFGHTLSKHGLHLETLANMQIEFTAAFHLV 349

Query: 374 FRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           F         +  ++   E A  R++ P+ K +  K A ++ +EA+E  GG+GYIE+  +
Sbjct: 350 FHAIELLGKDELGEASQAERAVLRLLTPLVKLYSAKQAISLASEALESFGGAGYIEDTGL 409

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFSTLE----QDLGSSGKKV 483
            +  R +   SI  G+ N + LDVL  + K        E +   LE    QDL  S  KV
Sbjct: 410 PQLLRNAQVLSIWEGTTNILSLDVLRAIHKENAAVAFLEDIHKRLEQIKLQDLIQSKVKV 469

Query: 484 ITILRDSISLC-------KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             I +   +         +E +  AR L   +    +A+ L           F
Sbjct: 470 QYIAQKLQNYIHSPQINDEEQQTGARQLAYSLTQIFAASLLLEHA----QWAF 518


>gi|163868298|ref|YP_001609507.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476]
 gi|161017954|emb|CAK01512.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476]
          Length = 539

 Score =  323 bits (827), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 150/530 (28%), Positives = 280/530 (52%), Gaps = 9/530 (1%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            N + SD+L+  + +  P  +    E +G++  S  A  L+  AN+  P L      G++
Sbjct: 12  KNTFLSDTLMFRIASTLPKSLLASFEEIGDFAASQEAWNLSCSANHYKPLLRYNDKWGKQ 71

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            +K+E H ++  L + S   GL  S+W+ +      +  ++ RA RL L A LE GHL  
Sbjct: 72  AEKLEIHSSYQDLQQYSRRAGLVTSLWENTSLENGVR--YQARAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE-KRGGTDIA 212
            ++TSA++  L++   + K W   + SR+YD +++    K S ++     + ++   +  
Sbjct: 130 VTITSAAIAVLISDSELFKKWQNVLLSRQYDSSSRPIHHKNSASLTCAFDDIEQHTFNFP 189

Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           ++   S  + +   +Y L+  K  + +P +D +++ A + G + CF VPR+ E+G+ NG 
Sbjct: 190 SVKKISFDENMQRDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFVPRIQENGAFNGF 249

Query: 271 -CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              + L  + G        ++F   +G+LLG+       ++D++ ++  D +++S   +R
Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGCYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   I + R+  +    L   P+ +R  ADIALDIAA+ AL  RLA +FD A +   E
Sbjct: 310 AALQFGIDFFRK-KMPNQPLP--PLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA+ARIM PI  Y   ++   +I E +  +G   +IE   +++     PA ++   S N 
Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARTVRNSSANQ 426

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +V D + + EK   LF++L   +  D+G +G + I I++ +  +   ++G  RF  E++A
Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            A++AA+L+   +  +A+ ++E+R      S++ ML  R+NA H+++ LY
Sbjct: 487 YAAAAASLHSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536


>gi|196249788|ref|ZP_03148484.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196210664|gb|EDY05427.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 380

 Score =  323 bits (827), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  +    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRSIFNKM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +    T    + +   + + E                  GL+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGTEEQKQKYLRALATGE-------------KLGAYGLSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A++ ++  K  D         W  +   ++ +++ A  +       +   + +    G
Sbjct: 133 DVASMKTRAIKDGDHYVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSIGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA++R   G  + +Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEAARLLTYQAAWLESNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A A       K +    A  V  +A++  GG+GY ++  + R  R++    I 
Sbjct: 310 LPYGKASAMA-------KLFAGDTAMKVTVDAVQIFGGNGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|138896969|ref|YP_001127422.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134268482|gb|ABO68677.1| Acyl-CoA dehydrogenase (short-chain specific) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 380

 Score =  322 bits (826), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  +    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRSIFNKM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +    T    + +   + + E                  GL+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGTEEQKQKYLRALATGE-------------KLGAYGLSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A++ ++  K  D         W  +   ++ +++ A  +       +   + +    G
Sbjct: 133 DVASMKTRAIKDGDHYVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSIGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA++R   G  + +Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEAARLLTYQAAWLESNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A A       K +    A  V  +A++  GG+GY ++  + R  R++    I 
Sbjct: 310 LPYGKASAMA-------KLFAGDTAMKVTVDAVQIFGGNGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|56421928|ref|YP_149246.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261420798|ref|YP_003254480.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297531593|ref|YP_003672868.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319768468|ref|YP_004133969.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56381770|dbj|BAD77678.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261377255|gb|ACX79998.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297254845|gb|ADI28291.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317113334|gb|ADU95826.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 380

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRGIFNKM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +         + +   + + E                   L+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGNEEQKQKYLRALATGE-------------KLGAYALSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A++ ++  K  D         W  +   ++ +++ A  +       +   + +    G
Sbjct: 133 DVASMKTRAVKDGDHYILNGSKVWITNGGEAEIYVVFAVTDPEKRHKGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
             + + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSFGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA++R   G  +I+Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAVDYAKQRVQFGKPIIEQQGVAFKLADMATAIEAARLLTYQAAWLESNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A A       K +    A  V  EA++  GG+GY ++  + R  R++    I 
Sbjct: 310 LPYGKASAMA-------KLFAGDTAMKVTVEAVQIFGGNGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|239828623|ref|YP_002951247.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808916|gb|ACS25981.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 379

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      +  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---REIFNKMAELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +    T    + +   + + E                  GL+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGTEEQKQKYLRALATGE-------------KLGAYGLSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D++++ ++  +  D         W  +   ++ +++ A  +       +   + +    G
Sbjct: 133 DVSSMKTRAVRDGDYYVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSIGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     AI YA++R   G  + +Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEAARLLTYQAAWLETNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A A       K +    A  V  +A++  GG GY ++  + R  R++    I 
Sbjct: 310 LPYGKASAMA-------KLFAGDTAMKVTVDAVQIFGGYGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|78044080|ref|YP_360183.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996195|gb|ABB15094.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 381

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 143/378 (37%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      + ++    GL    W   +        A+ I    L  +      
Sbjct: 29  AERDEQERFD---REIFKKMAELGLTGIPWPEEYGGAGMDYIAYAIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T    + +               P+         GLTE   G+
Sbjct: 86  TLSAHVSLGSFPIYKYGTEEQKQKYLK-------------PLALGEKLGAFGLTEPSAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  ++ +   +  D  Y L+G K F+++   ++ +++ A V+   G   +   + +    
Sbjct: 133 DAGSLKTTAVRDGD-YYILNGSKIFITNGGEAEIYVVFATVDKSKGHRGISAFIVEKGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G  + + + K+G RS+ TVEL F N     +   N+     +  KI L  LD   + ++ 
Sbjct: 192 GFSFGKKEKKLGIRSSPTVELVFENCR---IPKENLLGEEGQGFKIALSTLDGGRIGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  + +   +   +AD+A  I AA  L +  A     
Sbjct: 249 QAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQAARLLVYHAAWLESN 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                + AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 309 NLPYGKAAAMA-------KLFASETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + + + K
Sbjct: 362 YEGTSEVQRIVISSYILK 379


>gi|15616360|ref|NP_244665.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176423|dbj|BAB07517.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 380

 Score =  319 bits (818), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 75/356 (21%), Positives = 137/356 (38%), Gaps = 32/356 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL    W   +  +     ++ I    L  +       L +    ++  V    T  
Sbjct: 46  AELGLTGIPWPEEYGGIGADYVSYVIAVEELSRVCASTGVTLSAHLSLASWPVYKFGTEE 105

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + +               PM +       GLTE   G+D A + +      D  Y L+
Sbjct: 106 QKQQFL-------------RPMAEGKKIGAYGLTEPGSGSDAANMKTTAVLEGDD-YILN 151

Query: 230 GHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++  ++D +I+ A  E       V   + +    G    + + K+G RS+ T E
Sbjct: 152 GSKIFITNGGIADIYIVFAVTEPEKRHKGVSAFIVEADTPGFSVGKKEKKLGIRSSPTTE 211

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           + F +         N+     +  KI ++ LD     ++   V +A+     A+ YA  R
Sbjct: 212 IIFEDCRVP---KENLLGKEGDGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVAYANER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +  Q  +   +AD+A  + A+  L+++ A    E  S  +E+A        +K 
Sbjct: 269 KQFGKPIGQQQGIAFKLADMATKVEASRLLTYQAAWRESEGLSYGKESAM-------SKL 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +    A  V  EA++  GG GY +E  + R+ R++    I  G+     L +  +L
Sbjct: 322 FAGDTAMDVTVEAVQVFGGYGYTKEYPVERYMRDAKITQIYEGTNEIQRLVISKML 377


>gi|221065963|ref|ZP_03542068.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710986|gb|EED66354.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 568

 Score =  319 bits (817), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 146/530 (27%), Positives = 233/530 (43%), Gaps = 43/530 (8%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G N YS+DS L +L+      +  + +   L+ +GE        ELA +A+ N P
Sbjct: 23  VPDRHGANFYSTDSELQSLLRLYLPADLLTHLQPYLQRMGELAGGR-IDELAGIADRNPP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            L      G+   ++  HPA+  L R +  + GL              K    ++ A  Y
Sbjct: 82  TLEHRSRSGQDSQRIIKHPAYEELERIAYGEFGLQAISHRDDMLGWQGKMPPTVKYALTY 141

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     S+T +    L    T  +   + P++ S ++D               
Sbjct: 142 LFVQSEFGLCCPLSMTDSLTRTLKKFGTSELVDKYLPQLLSLDWD---------NQAQGA 192

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
           + +TE+  G+DIA   +      DG + L+G KWF S+P ++  + LA+V+G       +
Sbjct: 193 MFMTEQAAGSDIANTQTMAYPQIDGSWRLTGDKWFCSNPDAEFAMALARVDGAPAGMKGI 252

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+PR L+DGS N     RLK+K+G +S A+ E+       +L+G+       + DM 
Sbjct: 253 SLFLLPRTLDDGSANLYRIIRLKDKMGTKSMASGEIRMEGATAYLVGEQGRGFVQIADMV 312

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S   MR ++AEA   A  R   G  L D P+M+R +  + +    A  + 
Sbjct: 313 NNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLEDMPLMQRQLDKLRVPAEQARTMV 372

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F+ A +   + +  E A    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R
Sbjct: 373 FQTAQTLMRSDAGEEGAYPLLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWSDPR 432

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRD 489
             R++   SI  G+ N + LDV+  + +  +   L + L + L+Q L      ++   R 
Sbjct: 433 LVRDAHLGSIWEGTSNIVALDVIRAIRREGSLPVLQQYLHALLDQAL------LVPGYRQ 486

Query: 490 SISLCKEDKGLARFLTEKIA------LASSAAALYRAGMNDIADVFLENR 533
           ++    E    A  L E+ A      LA  AA         IA  +   R
Sbjct: 487 ALERALE---RASALAERAAQDGGDVLARQAATALYNCTTAIAMAWEARR 533


>gi|52082251|ref|YP_081042.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52787643|ref|YP_093472.1| AcdA [Bacillus licheniformis ATCC 14580]
 gi|52005462|gb|AAU25404.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52350145|gb|AAU42779.1| AcdA [Bacillus licheniformis ATCC 14580]
          Length = 379

 Score =  319 bits (817), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 145/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+ E       L  +    GL    W   +  +     A+ I    L  +    
Sbjct: 26  PTAKERDEEERFDM--ELFAKMAELGLTGIPWPEEYGGIGSDYLAYVIAVEELSKVCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +  +   +    T    +++               PM +       GLTE   
Sbjct: 84  GVTLSAHTSLAGWPIYAFGTEEQKQEYLK-------------PMARGEKIGAYGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   + +  +K  D  Y L+G K F+++  ++D +I+ A +            + +  
Sbjct: 131 GSDAGGMKTTAEKKGDE-YILNGTKIFITNGGIADFYIVFANLAPEQKHKGTTAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + + K+G RS+ T E+ F +    L    N   G  E  KI +  LD     +
Sbjct: 190 FPGFSVGKKERKLGIRSSPTTEIIFQDCRVPLK---NRLGGEGEGFKIAMKTLDGGRNGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+     A  YA+ R   G  + +Q  +   +AD+A +I A+  L+++ A   
Sbjct: 247 AAQAVGIAQGAFEAAKAYAKERKQFGRPIAEQQGIAFKLADMATEIEASRLLTYQAAWLE 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E     + +A        +K +    A  V  EA++  GG GY ++  + R  R++   
Sbjct: 307 SEGLPYGKASAM-------SKLYAGDTAMKVTTEAVQIFGGYGYTKDYPVERFMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +  +L K
Sbjct: 360 QIYEGTQEIQKLVISRMLMK 379


>gi|319648125|ref|ZP_08002342.1| AcdA protein [Bacillus sp. BT1B_CT2]
 gi|317389760|gb|EFV70570.1| AcdA protein [Bacillus sp. BT1B_CT2]
          Length = 379

 Score =  319 bits (817), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 145/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+ E       L  +    GL    W   +  +     A+ I    L  +    
Sbjct: 26  PTAKERDEEERFDM--ELFAKMAELGLTGIPWPEEYGGIGSDYLAYVIAVEELSKVCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +  +   +    T    +++               PM +       GLTE   
Sbjct: 84  GVTLSAHTSLAGWPIYAFGTEEQKQEYLK-------------PMARGEKIGAYGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   + +  +K  D  Y L+G K F+++  ++D +I+ A +            + +  
Sbjct: 131 GSDAGGMKTTAEKKGDE-YILNGTKIFITNGGIADFYIVFANLAPEQKHKGTTAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + + K+G RS+ T E+ F +    L    N   G  E  KI +  LD     +
Sbjct: 190 FPGFSVGKKERKLGIRSSPTTEIIFQDCRVPLK---NRLGGEGEGFKIAMKTLDGGRNGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+     A  YA+ R   G  + +Q  +   +AD+A +I A+  L+++ A   
Sbjct: 247 AAQAVGIAQGAFEAARAYAKERKQFGRPIAEQQGIAFKLADMATEIEASRLLTYQAAWLE 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E     + +A        +K +    A  V  EA++  GG GY ++  + R  R++   
Sbjct: 307 SEGLPYGKASAM-------SKLYAGDTAMKVTTEAVQIFGGYGYTKDYPVERFMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +  +L K
Sbjct: 360 QIYEGTQEIQKLVISRMLMK 379


>gi|288554425|ref|YP_003426360.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545585|gb|ADC49468.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 380

 Score =  319 bits (817), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 144/381 (37%), Gaps = 32/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLM 143
               P  E+ ++ E  P    ++ +    GL        +        ++ I    L  +
Sbjct: 22  EQITPFIEKMEENETFP--REIVNKMGELGLMGIPIPEEYGGAGMDFTSYIIAINELSKV 79

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +      L   +    + +    T    + + PK+ S EY                 GLT
Sbjct: 80  SATVGVILSVHTSVGTNPILYFGTEEQKQKYVPKLASGEY-------------LGAFGLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  ++ +  +K  +         +  +   +D +I+ A  + ++G   +   + 
Sbjct: 127 EPGAGSDAGSLKTTAKKEGNDYILNGSKVFITNGGEADVYIVFASTDSQLGTKGISAFIV 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           D    G    + + K+G   + T EL F +       + N+     E  KI +  LD+  
Sbjct: 187 DKDTPGFSVGKKEKKMGLHGSNTTELTFEDARVP---EENLLGQEGEGFKIAMSNLDAGR 243

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + +AE     A+ YA+ R   G  +  Q  +   +AD+A  +  +  L +R A
Sbjct: 244 IGIAAQSLGIAEAALEAAVGYAKERKQFGKPIGHQQGLGFKLADMATKVEGSKLLVYRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              +  K    EA+ A       K +  + A  V  EA++  GG GY ++  + R++R++
Sbjct: 304 KLRELGKKSGMEASMA-------KLFASRTAVEVSIEAVQVYGGYGYTKDYPVERYFRDA 356

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+     + +   L
Sbjct: 357 KICEIYEGTSEIQRIVIGKHL 377


>gi|319762662|ref|YP_004126599.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824803|ref|YP_004388106.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|317117223|gb|ADU99711.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310175|gb|AEB84590.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 568

 Score =  319 bits (817), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 139/534 (26%), Positives = 234/534 (43%), Gaps = 28/534 (5%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKEL----ELLGEYVLS 67
            Q+   + +  A +  P    +N Y+ D  L +L+A   P+ +H  L    E +GE    
Sbjct: 7   TQMTALAQASAAAHPVPDRGHVNYYTGDGELQSLLALYLPADLHAHLQPYFERMGELAGG 66

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEP 126
               + A+ A+ N P L      G+   ++  HPA+  + + +    GL           
Sbjct: 67  A-VDDWAQEADRNPPTLEMRSRAGKEQQRIVKHPAYVEMEKVAFQQFGLAAISHREDMLG 125

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
              K    ++ A  YL  Q E G     S+T +    L     P +   + P++ + ++D
Sbjct: 126 WKGKMPPIVKYALTYLFVQSEFGLCCPLSMTDSLTRTLKKYGAPELVNKYLPRLLAMDFD 185

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                    +SV   + +TE+  G+DIA   +      DG + L G KWF S+P +   +
Sbjct: 186 ---------SSVQGSMFMTEQAAGSDIANTLTMAYPQEDGSWRLYGEKWFCSNPDAGFSM 236

Query: 245 MLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +LA+V+G       +  FL+PR+ +DGS N     RLK+K+G RS A+ E+       +L
Sbjct: 237 VLARVDGGPPGMKGISLFLLPRIKDDGSTNHYHIVRLKDKMGTRSMASGEIRMEGAVAYL 296

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + DM     L + + S   MR ++AEA   AR R   G  L D P+M+  
Sbjct: 297 VGEQGRGFVQIADMVNNSRLSNGMRSAGMMRRAVAEAEFIARERWAFGRRLQDLPLMRVQ 356

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAME 417
           +  + +    A  + F+ A +   + +  + A A  RI+ P+ K+  C+ A  V  +AME
Sbjct: 357 LDKLRVPAEQARTMVFQTAATLARSDAGDKSAYALLRILTPMIKFRACRDARKVAGDAME 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQD 475
             GG GYIEE +  R  R++   SI  G+ N + LDV+  +++  +L         L  D
Sbjct: 417 VRGGCGYIEEWADPRLVRDAHLGSIWEGTSNIVALDVVRAIKREGSLPVLNDYLHGLLAD 476

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             +        L D+++   +    A     +  LA  AA+        IA  +
Sbjct: 477 TAAITPAYRQALGDALARAAKLAERAAAEGGE-KLARQAASGLYHCTTAIAMAW 529


>gi|295400654|ref|ZP_06810631.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112656|ref|YP_003990972.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294977235|gb|EFG52836.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217757|gb|ADP76361.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 379

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRGIFNKM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +    T    + +   + + E                  GL+E   G+
Sbjct: 86  TLSAHISLASWPIYKFGTEEQKQKYLRALATGE-------------KLGAYGLSEPGAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A++ ++  +  D         W  +   ++ +++ A  +       +   + +    G
Sbjct: 133 DVASMKTRAVRDGDYYVLNGSKVWITNGGEAEIYVVFAITDPEKRHKGISAFIVEKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T EL F +     +   N+     E  KI ++ LD     ++  
Sbjct: 193 FSIGKKEKKLGIRSSPTTELIFEDCR---IPKENLLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     AI YA++R   G  + +Q  +   +AD+A  I AA  L+++ A      
Sbjct: 250 AVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEAARLLTYQAAWLETNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A A       K +    A  V  +A++  GG+GY ++  + R  R++    I 
Sbjct: 310 LPYGKASAMA-------KLFAGDTAMKVTVDAVQIFGGNGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|311104130|ref|YP_003976983.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758819|gb|ADP14268.1| acyl-CoA dehydrogenase, middle domain protein 3 [Achromobacter
           xylosoxidans A8]
          Length = 566

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 133/520 (25%), Positives = 226/520 (43%), Gaps = 26/520 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G N +S+D    AL   +      + +   LE LG         ELA  A+ + P
Sbjct: 15  VPDSRGQNLFSADPYAEALSRRYLPAALHAHLLPHLERLGALAGG-VMDELAATADKHPP 73

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF---EPVVRKQAHKIRAAR 139
            L      G    +++ HPA+  L R +  +    ++  R      P     A K   + 
Sbjct: 74  TLSVRSRAGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPMPAAAKYALSH 133

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L++ A+      +S + + A  +     P + +   P++ S+++D   +  M        
Sbjct: 134 LFVQAEFGLCCPVSMTDSLARTLRKFGDPELVERVLPEVTSQDFDTLRQGAMF------- 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV- 258
             +TE+  G+D++A         DG + + G KWF S+P +   ++LA+ E + G   V 
Sbjct: 187 --MTEQGAGSDVSATEVTATAQDDGTWLIHGDKWFCSNPDAGYAMVLARSEAQPGLKGVS 244

Query: 259 ----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
               PR L DGS N     RLK+K+G RS A+ E+       +L+G+       + DM  
Sbjct: 245 LFLLPRDLADGSHNHYRILRLKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMIN 304

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L + + +   MR ++ EA++ ++ R   G  LID P+M+R +  + +    A ++ F
Sbjct: 305 NSRLSNGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARSVMF 364

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A +   A     + A ARI+ P+ K+  C+ A  V  +AME  GG GYIEE +  R  
Sbjct: 365 QTARALAGADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLV 424

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++   SI  G+ N + LDVL  + K  N    L S ++  L         +        
Sbjct: 425 RDAHLGSIWEGTSNIVALDVLRAINKE-NSLPALRSHIDSLLAEGRPCPPELAELQARAL 483

Query: 495 KEDKGLARFLTE--KIALASSAAALYRAGMNDIADVFLEN 532
           ++   LA    +  +  LA  AA+L    ++  A  +   
Sbjct: 484 EQTYALAEHAAQADRPELARQAASLLYHAVSMAALRWEAT 523


>gi|240850657|ref|YP_002972057.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup]
 gi|240267780|gb|ACS51368.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup]
          Length = 539

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 151/530 (28%), Positives = 279/530 (52%), Gaps = 9/530 (1%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            N + SD+L+  + +  P  +    E +G++  S  A +L+ +AN+  P L      G+ 
Sbjct: 12  KNTFLSDTLMFRIASTLPKFLLASFEEIGDFAASREACKLSCLANHYKPLLCYNDEWGQP 71

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            +K+E H ++ AL + S   GL  S+W+ +      +  ++ RA RL L A LE GHL  
Sbjct: 72  TEKLEIHSSYQALQQYSRQAGLVTSLWENTSSENGVR--YQARAIRLALSAGLETGHLNE 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE-KRGGTDIA 212
             +TSA++  L++   + K W   + SR+YD ++K    K + ++     + ++   +  
Sbjct: 130 VIITSAAIAVLISDIELFKKWQNVLLSRQYDSSSKPIHHKKAASLTCAFDDIEKYAFNFP 189

Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           ++   S    +   +Y L+  K  + +P +D +++ A + G + CF +PR+ E+G+ NG 
Sbjct: 190 SVKKISFDDSMERDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFIPRIQENGALNGF 249

Query: 271 -CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              + L  + G        ++F  ++G+LLG+       ++D++ ++  D +++S   +R
Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGSYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   I + R+  +    L   P+ +R  ADIALDIAA+ AL  RLA +FD A +   E
Sbjct: 310 AALQFGIDFFRK-KMPNQPLP--PLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA+ARIM PI  Y   ++   +I E +  +G   +IE   +++     PA  +   S N 
Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARIVRNSSANQ 426

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +V D + + EK   LF++L   +  D+G +G + I I++ +  +   ++G  RF  E++A
Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
            A++AAAL    +  +A+ ++E+R      S++ ML  R+NA H+++ LY
Sbjct: 487 YAAAAAALRSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536


>gi|228911181|ref|ZP_04074986.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228848357|gb|EEM93206.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 379

 Score =  317 bits (812), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F N    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFENCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|149182451|ref|ZP_01860926.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1]
 gi|148849844|gb|EDL64019.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1]
          Length = 379

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 145/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDKMAELGLTGIPWPEEYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +         + +               PM +     G GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIYKFGNEEQKQKYLK-------------PMAQGEKIGGYGLTEPASGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  +   D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTTAKLDGDH-YILNGSKIFITNGGIADIYVVFALTDPSQRQRGTTAFIIESDFE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F N         N+     E  KI ++ LD     ++ 
Sbjct: 192 GFSVGKKEKKLGIRSSPTTEIVFDNCRVP---KENMLGKEGEGFKIAMMTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     +I YA+ R   G  +     +   IAD+A  I A+  L+++ A    E
Sbjct: 249 QAVGIAQGALDASISYAKEREQFGKPIAANQGISFKIADMATSIEASRLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A +++MA          A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAMSKLMAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  ++ K
Sbjct: 362 YEGTQEIQRLVISRMVTK 379


>gi|78042819|ref|YP_360157.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77994934|gb|ABB13833.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 381

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 141/378 (37%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
             R ++  F      + ++    GL    W   +        A+ I    L  +      
Sbjct: 29  AARDEEERFD---REIFKKMAELGLTGIPWPEEYGGAGMDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T    + +               P+         GLTE   GT
Sbjct: 86  TLSAHVSLGSFPIYKYGTEEQKQKYLK-------------PLALGEKMGAFGLTEPSAGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  ++ +   K  D  Y L+G K F+++   ++ +++ A V+       +   + +    
Sbjct: 133 DAGSLKTTAVKDGD-YYVLNGSKIFITNGGEAEIYVVFATVDKNKRHKGISAFIVEKGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G  + + + K+G RS+ TVEL F N     +   N+     +  KI L  LD   + ++ 
Sbjct: 192 GFNFGKKEKKMGIRSSPTVELIFENCR---IPKENLLGEEGQGFKIALSTLDGGRIGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  + +   +   +AD+A  I AA  L +  A     
Sbjct: 249 QAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQAARLLVYHAAWLESN 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                + A+ A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 309 NLPYGKAASMA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + + + K
Sbjct: 362 YEGTSEVQRMVISSYILK 379


>gi|213513810|ref|NP_001133849.1| AIDB protein [Salmo salar]
 gi|209155562|gb|ACI34013.1| aidB [Salmo salar]
          Length = 628

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 130/551 (23%), Positives = 220/551 (39%), Gaps = 53/551 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPS--VVHKELELLGEYVLSCTAQELARMANYNTP 82
             Q    +  N +  D+LL   +        V+ +L + GE ++        R      P
Sbjct: 60  FFQERPML-KNPFLEDALLQGYLRRHLPSEAVYSDLHVFGERLV-REVDGWGRECEVTPP 117

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  Y P G R D++   PAW  +   S  +GL    ++RS+    R      +  +LYL
Sbjct: 118 RLVTYDPWGCRVDRIVTSPAWQRMKDLSAQEGLVAIGYERSYGEWSR----VYQMCKLYL 173

Query: 143 MAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +     +      +  +A ++  +       D   ++ SR           +     G 
Sbjct: 174 YSPSSGLYTCPLAMTDGAAKVIQSLGVSWPVADAFSRLTSRN---------PEHFWTSGQ 224

Query: 201 GLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVG 254
            +TE+RGG+D+     +     SDG Y LSG KWF S+  +D  + LA+V         G
Sbjct: 225 WMTERRGGSDVGNGTETIALPQSDGTYRLSGFKWFTSATDADMTLTLARVTDVDGQTTSG 284

Query: 255 CFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +         E G   G+  QRLK+K+G R   T EL         L +       +
Sbjct: 285 SRGLSMFYAAVRDEQGMVQGIEVQRLKDKLGTRQMPTAELLLDGLPAHRLSEEGRGVACI 344

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +M  +  + +++ +V+GMR  L  A  YA RR   G +L D P+  + +A + ++   A
Sbjct: 345 ANMLTVSRIHNSVSAVAGMRRVLQLARDYATRRSAFGKLLRDHPLHMQTLARMEVETRGA 404

Query: 370 TALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             L   +       +   +   E    R++ P+ K +  K A AVI+E +E  GG GYIE
Sbjct: 405 FLLVMEVCRLIGREETGHASQLETHLLRLLTPVAKLYTGKQAIAVISEGLESFGGQGYIE 464

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------ 480
           +  +    R++   SI  G+ N + LDVL  + + + L  Q + T  Q L ++       
Sbjct: 465 DTGLPAMLRDAQVLSIWEGTTNVLSLDVLRCVSRSSGLVLQAYFTHTQSLLAAASLPSLS 524

Query: 481 ------KKVITILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMNDIA--- 526
                    ++ LR+ +           +  AR L   +A     A L      + A   
Sbjct: 525 VAVRSVDSALSGLREFLQAAALKPPGFMELAARDLAYSLARIYMGALLIDHASWEGASQS 584

Query: 527 DVFLENRFLDN 537
           D +   R+ + 
Sbjct: 585 DAYAALRWCEQ 595


>gi|167773029|ref|ZP_02445082.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM
           17241]
 gi|167664962|gb|EDS09092.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM
           17241]
          Length = 379

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 150/405 (37%), Gaps = 34/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++VLS   QE+AR    +  +     P  +  D+ E  PA    + +    G     + +
Sbjct: 2   DFVLSKE-QEMARQLFRDFAE-KEVKPLAQEVDEEERFPA--ETVAKMQKFGFMGIPFPK 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                          +  Y +   E   + + +    S    +    + K   P     E
Sbjct: 58  DMGGQGCD-------SLTYAICVEELSRVCATTGVIVSAHTSLGCDPIKKFGTP-----E 105

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                  PM +  +    GLTE   GTD +   ++     D  Y L+G K F+++   +D
Sbjct: 106 QIKKYLVPMAQGKLLGAFGLTEPNAGTDASGQQTKAVLEGDH-YVLNGSKIFITNGGKAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +I+ A  +   G   +   + +    G    + + K+G R ++T EL F N        
Sbjct: 165 IYIIFAMTDKSKGVKGISAFIVEKDFPGFSIGKKELKMGIRGSSTCELIFENCIVP---K 221

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
            N+     +   I +  LD   + ++   + +A     E + Y + R   G  +      
Sbjct: 222 ENLLGQEGKGFTIAMTTLDGGRVGIAAQALGIAQGAFDETVKYVKERKQFGRPISAFQNT 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   I AA  L +  A + D  K  S +AA A       K +  ++A  V  + 
Sbjct: 282 QFQLADLKTKIEAARLLVYSAAVAKDTKKRFSTDAAMA-------KLFAAEVAMEVTTKC 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GY  +  + R  R++    I  G+     + +     K
Sbjct: 335 VQLFGGYGYTRDYPVERMMRDAKITEIYEGTSEVQRMVISGGFLK 379


>gi|160897884|ref|YP_001563466.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363468|gb|ABX35081.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 567

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 140/539 (25%), Positives = 231/539 (42%), Gaps = 37/539 (6%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCT 69
               S    A    P   G N Y++DS L  L+A +      + +   LE +G       
Sbjct: 9   AAMQSSPAQAFQAVPDRHGSNLYTTDSQLQPLLALYLPPEVNAHLQPYLERMGALAG-RE 67

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVV 128
             E A  A+ N P+L      G    ++  HPA+  + R +  + GL             
Sbjct: 68  IDEWALTADRNPPELEHRDRTGRDAQRIVKHPAYVEMERIAYGEFGLAVMSHRTGVLGWD 127

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPT 186
            K     + A  YL  Q E G     S+T   A  +     P + + + P++    ++  
Sbjct: 128 GKLPPLAKYALTYLFVQAEFGLCCPLSMTDSLARTLRKYGEPALVEKYWPRMTQLRFEDQ 187

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
            +  M          +TE+  G+DI+   +  +  +DG + LSG KWF S+P +D  ++L
Sbjct: 188 AQGAMF---------MTEQAAGSDISNTQTLARPAADGSWRLSGDKWFCSNPDADFAMVL 238

Query: 247 AQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           A+VEG       +  FL+PR L+DGS N     RLK+K+G RS A+ E+       +L+G
Sbjct: 239 ARVEGAPAGMKGISLFLLPRRLDDGSANHYRIVRLKHKLGTRSMASGEIVLDGAVAYLVG 298

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + DM     L + + S   MR ++AEA + AR R   G  L D P+M+R + 
Sbjct: 299 EQGRGFVQMADMVNNSRLSNGVRSAGLMRRAVAEAEYVARERRAFGKALQDMPLMQRQLD 358

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECI 419
            + +    A  +  + A +   + +  + A A  RI+ P+ K+  C+ A  V  +AME  
Sbjct: 359 KLRIYSEQARTMVLQTAQALQRSDAGEDGAYALLRILTPMIKFRACRDARKVTGDAMEVR 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL------FEQLFSTLE 473
           GG GYIEE S  R  R+S   SI  G+ N + LDV+  +++  +L        QL +  E
Sbjct: 419 GGCGYIEEWSDPRLVRDSHLGSIWEGTSNIVALDVIRAIKREGSLPVLRDHAAQLLAQTE 478

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
                      ++ + +    +  +     L       ++A+ LY       A  +  +
Sbjct: 479 AATDFKAALSASMDKAAALALRAAEEGGDRLAR-----AAASGLY-HCFTATAMAWEAS 531


>gi|304317108|ref|YP_003852253.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778610|gb|ADL69169.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 380

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 146/398 (36%), Gaps = 35/398 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R       +     P  +  D  E  P     +R+   + +    +   +      
Sbjct: 9   QEMVRRVVREFAE-KEVAPKAKEIDITEEFP--WDTVRKMAQNDMMGIPYPEEYGGAGGD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKA 189
               I A      A    G ++S   +  S  +    T    + +               
Sbjct: 66  YLSYIIAVEEISRACATTGVILSAHTSLGSFPIYQWGTEEQKRKYL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ K       GLTE   GTD A   +      D  Y L+G K F+++   +D +I+ A 
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAGQQTTAVLDGDH-YVLNGSKIFITNGGKADIYIIFAM 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   + +    G    +++ K+G R+++T EL F +         N+    
Sbjct: 172 TDKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDCIVP---KENLLGKE 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362
            E  KI +  LD   + ++   + +A+A     I YA+ R   G  +     ++  IAD+
Sbjct: 229 GEGFKIAMATLDGGRIGIAAQALGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I A+  L +  A         + EAA A       K +  + A  V  + ++  GG 
Sbjct: 289 ATRINASRWLVYNAAWRKQVGLPYTMEAAMA-------KLYASETAMFVTTKTVQIFGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+ ++  + R  R++    I  G+     + +   L K
Sbjct: 342 GFTKDYPVERFMRDAKITEIYEGTSEVQKMVISGNLLK 379


>gi|225182055|ref|ZP_03735486.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167268|gb|EEG76088.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 378

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 144/396 (36%), Gaps = 34/396 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R       +        ER +K EF      +  +    GL    W+  +      
Sbjct: 9   QEMIRKMVREFAEKEVAPTAAERDEKEEFS---RPIFDKMGEIGLTGLPWEEKYGGAEAG 65

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              + I    L  +       L +     +  +    T    + +               
Sbjct: 66  FIPYVIAVEELSRVCGSTGVTLSAHISLCSWPIWKYGTEEQKQKYL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +     G GLTE   GTD A + +  +   D  Y L+G K F+++   D F++ A  
Sbjct: 113 PLAQGKALGGYGLTEPSAGTDAAGLRTTAKLDGDH-YILNGTKIFITNGDGDTFVVFAAT 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G      + K+G R+++T EL F +         N+     
Sbjct: 172 DKSKGPKGISAFIVEKGFEGFKVGSHEKKLGIRASSTTELIFEDCKVP---KENLLGKEG 228

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +  LD     ++   + LA+     A+ Y++ R   G  + +   +   +AD+A
Sbjct: 229 EGFKIAMSTLDGGRNGIAAQALGLAQGAFEAALEYSKGREQFGQPIFNFQAISFMLADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+  L+++ A    E     + +A A       K +    A  +   A++  GG G
Sbjct: 289 TKIEASRLLTYQAAYLEGEGLPYGKASAMA-------KLYASDAAMEITTNAVQIFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           Y  E  + R  R++    I  G+     L +   ++
Sbjct: 342 YSREYPVERMMRDAKITQIYEGTNEVQRLVISRYIK 377


>gi|206970403|ref|ZP_03231356.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|206734980|gb|EDZ52149.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
          Length = 379

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQHGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+  G  +  K+ +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGGEGQGFKVAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|311032041|ref|ZP_07710131.1| short chain acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 379

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 147/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E       + ++    GL    +   +  +     A+ I    L  +    
Sbjct: 26  PTAAERDEEESFDM--EIFKKMADLGLTGIPFPEEYGGIGSDYLAYCIAVEELSRVCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +  ++  +    T    + +               P+ + +   G GLTE   
Sbjct: 84  GVTLSAHTSLASWPIYKYGTEEQKQKYL-------------VPLAQGTSIGGYGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   + +  +   D  Y L+G K F+++  ++D +++ A  +           + +  
Sbjct: 131 GSDAGGMRTTAKLDGDH-YVLNGSKIFITNGGIADIYVVFAVTDPSSKHKGTSAFIVEAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G RS+ T E+ F +    +    N+     E  K+ +  LD     +
Sbjct: 190 FPGFSVGKKEKKLGIRSSPTTEIIFEDCRVPV---ENMLGAEGEGFKVAMTTLDGGRNGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+     A+ YA+ R   G  +  Q  +   +AD+A  + A+  L+++ A   
Sbjct: 247 AAQAVGIAQGALDAAVAYAKERVQFGKPIAAQQGVSFKLADMATTVEASRLLTYQAAWRE 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E  S   E+A        +K +    A  V  EA++  GG GY ++  + R+ R++   
Sbjct: 307 SEGLSYGLESAM-------SKLFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +  +L K
Sbjct: 360 QIYEGTQEIQRLVISRMLTK 379


>gi|126698638|ref|YP_001087535.1| butyryl-CoA dehydrogenase [Clostridium difficile 630]
 gi|255100090|ref|ZP_05329067.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-63q42]
 gi|255305980|ref|ZP_05350152.1| butyryl-CoA dehydrogenase [Clostridium difficile ATCC 43255]
 gi|255655072|ref|ZP_05400481.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-23m63]
 gi|296451059|ref|ZP_06892801.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296880588|ref|ZP_06904550.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|115250075|emb|CAJ67895.1| Butyryl-CoA dehydrogenase [Clostridium difficile]
 gi|296260066|gb|EFH06919.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296428542|gb|EFH14427.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 378

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 140/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P  +  + +    G+    + + +          I A           
Sbjct: 25  PLATELDEEERFP--YETVEKMAKAGMMGIPYPKEYGGEGGDTVGYIMAVEELSRVCGTT 82

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +         + +   + S E                  GLTE   
Sbjct: 83  GVILSAHTSLGSWPIYQYGNEEQKQKFLRPLASGE-------------KLGAFGLTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++ ++ D ++++A  +   G   +   + +  
Sbjct: 130 GTDASGQQTTAVLDGDE-YILNGSKIFITNAIAGDIYVVMAMTDKSKGNKGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G  +   + K+G R +AT EL F +     +   N+     +  KI +  LD   + +
Sbjct: 189 TPGFSFGVKEKKMGIRGSATSELIFEDCR---IPKENLLGKEGQGFKIAMSTLDGGRIGI 245

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + LA     E + Y + R   G  L      +  +AD+ + + AA  L ++ A + 
Sbjct: 246 AAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAARHLVYQAAINK 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K    EAA A       K +  + A  V  +A++  GG GY  +  + R  R++   
Sbjct: 306 DLGKPYGVEAAMA-------KLFAAETAMEVTTKAVQLHGGYGYTRDYPVERMMRDAKIT 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 359 EIYEGTSEVQRMVISGKLLK 378


>gi|296159351|ref|ZP_06842176.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295890335|gb|EFG70128.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 588

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 136/502 (27%), Positives = 230/502 (45%), Gaps = 33/502 (6%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCT 69
             QP+     +   P   G+N ++SD     L+  +    +  +LE     LG+   S  
Sbjct: 5   TAQPAHGSSNI---PDSRGINFFTSDPDFERLLKLHLGDALFHDLEGQLVSLGQRA-SDE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVV 128
               A  A+ N PQL      GE    ++ HP + AL R +  + GL     +       
Sbjct: 61  LDIWATSADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAELGLAALSHETRDGKQS 120

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                K     L++ A+      +S + +    +     P +   + PK+ SR++D    
Sbjct: 121 PPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPKLASRDFD---- 176

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQG----QKISDGIYCLSGHKWFLSSPMSDAFI 244
                T     + +TE+  G+D+A I ++            + L G KWF S+  +D  +
Sbjct: 177 -----TLFQGAMFMTEQAAGSDVARIATRASLESDADGGQTWRLYGDKWFCSNADADLAM 231

Query: 245 MLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +LA+ +        +G FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L
Sbjct: 232 VLARPDTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYL 291

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G++      + DM  +  L + + +   MR +L EA+H AR R   G  LID P+M+R 
Sbjct: 292 IGEVGRGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQ 351

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAME 417
           +  + L    A ++  R+A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME
Sbjct: 352 LLKMMLPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAME 411

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG+GYIEE S AR  R++   SI  G+ N + LD+    ++   L E L + L   LG
Sbjct: 412 VRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLRDLLG 470

Query: 478 SSG--KKVITILRDSISLCKED 497
           ++G     + +LR +++   + 
Sbjct: 471 AAGLPPASLALLRSTLARACDA 492


>gi|150390841|ref|YP_001320890.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950703|gb|ABR49231.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 379

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 143/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + + +  G     + + +            A      A    
Sbjct: 26  PLAAEIDEEERFPV--ETVEKMVKAGFMGIPFPKKYGGEGGDNIGYAIAVEELSRACGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+  A  +    T    + +               P+ K       GLTE   
Sbjct: 84  GVILSAHVSLGAHPIFEFGTEEQKQKYLI-------------PLAKGEKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A T+      D  Y L+G K F+++   +  +I++A  +  VG   +   + D  
Sbjct: 131 GTDASAQTTTAVLDGDH-YILNGSKIFITNAGYAHTYIIMAMTDKSVGTKGISAFIVDVD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G      + K+G R ++T EL F +     +   N+        KI +  LD   + +
Sbjct: 190 TEGFTIGPKEKKLGIRGSSTCELIFDDCR---IPKENIIGKEGFGFKIAMKTLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E ++Y + R   G  +      +  +AD++  I AA  L ++ A + 
Sbjct: 247 AAQALGIAQGALDETVNYVKERRQFGRPISAFQNTQFQLADMSSKIEAARLLVYKAAYNK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     + EAA A       K +  + A  V  +A++  GG GYI +  + R  R++   
Sbjct: 307 DMGLPYANEAAMA-------KLFASEAAMEVTTKAVQLHGGYGYIRDYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 360 EIYEGTSEVQKMVIAANLLK 379


>gi|23100465|ref|NP_693932.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778698|dbj|BAC14966.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 379

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 141/376 (37%), Gaps = 33/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER ++  F  +    +      GL    W   +  +     ++ I    L  +       
Sbjct: 30  ERDEEERFDRSIFDQM---AQLGLTGIPWPEEYGGIGSDYLSYVIAVEELSRVCASTGVT 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L +    ++  +    T    K++  ++ + E                   L+E   G+D
Sbjct: 87  LSAHLSLASWPIFKYGTEDQKKNFLQRLATGE-------------ALGAYALSEPGAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + ++ +  ++  +         W  +  ++D +I+ A+ +       +   + +    G 
Sbjct: 134 VVSMKTTARRDGEDFVINGNKVWITNGGVADIYIVFAKTDTDANHKGISAFIIEKGTEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMR 329
            + + + K+G RS+ T EL F N         N+     E  KI +  LD     ++   
Sbjct: 194 RFGKKEKKLGIRSSPTTELIFENCRIPKS---NLLGNEGEGFKIAMTTLDGGRNGIAAQA 250

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +A+     A  YA+ R   G  + +   +   +AD+A +I AA  L+++ A       
Sbjct: 251 VGIAQGALDAASDYAKERQQFGKPIAENQGISFKLADMATEIEAARLLTYQAAWLESAGL 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              + +A        +K +   +A     EA++  GG GY ++  + R+ R++    I  
Sbjct: 311 PYGKASAM-------SKLFAGDVAMKSTVEAVQVFGGYGYTKDYPVERYMRDAKITQIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +  ++ K
Sbjct: 364 GTNEVQRLVIGRMVTK 379


>gi|254974604|ref|ZP_05271076.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-66c26]
 gi|255091996|ref|ZP_05321474.1| butyryl-CoA dehydrogenase [Clostridium difficile CIP 107932]
 gi|255313730|ref|ZP_05355313.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-76w55]
 gi|255516412|ref|ZP_05384088.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-97b34]
 gi|255649510|ref|ZP_05396412.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-37x79]
 gi|260682678|ref|YP_003213963.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260686276|ref|YP_003217409.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519641|ref|ZP_07405988.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-32g58]
 gi|260208841|emb|CBA61771.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260212292|emb|CBE03052.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291]
          Length = 378

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 139/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P  +  + +    G+    + + +          I A           
Sbjct: 25  PLATELDEEERFP--YETVEKMAKAGMMGIPYPKEYGGEGGDTVGYIMAVEELSRVCGTT 82

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +         + +   + S                    GLTE   
Sbjct: 83  GVILSAHTSLGSWPIYQYGNEEQKQKFLKPLASG-------------DKLGAFGLTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++ ++ D ++++A  +   G   +   + +  
Sbjct: 130 GTDASGQQTTAVLDGDE-YILNGSKIFITNAIAGDIYVVMAMTDKSKGNKGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G  +   + K+G R +AT EL F +     +   N+     +  KI +  LD   + +
Sbjct: 189 TPGFSFGVKEKKMGIRGSATSELIFEDCR---IPKENLLGKEGQGFKIAMSTLDGGRIGI 245

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + LA     E + Y + R   G  L      +  +AD+ + + AA  L ++ A + 
Sbjct: 246 AAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAARHLVYQAAINK 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K    EAA A       K +  + A  V  +A++  GG GY  +  + R  R++   
Sbjct: 306 DLGKPYGVEAAMA-------KLFAAETAMEVTTKAVQLHGGYGYTRDYPVERMMRDAKIT 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 359 EIYEGTSEVQRMVISGKLLK 378


>gi|89095580|ref|ZP_01168474.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89089326|gb|EAR68433.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 379

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 136/377 (36%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      +  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---REIFDKMAELGLTGIPWPEEYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    +    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIYKFGSEEQKQKYLK-------------PMAQGEKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  +   D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMRTTARLDGDHYVLNGSKIFITNGGIADIYVVFALTDPESRQKGTTAFIIESDFPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G RS+ T E+ F +        L       E  KI ++ LD     ++  
Sbjct: 193 FSVGKKEKKLGIRSSPTTEIIFEDCRVPKKNMLGKEG---EGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  +  Q  +   +AD+A  + AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDAAVDYAKEREQFGKPIALQQGIGFKLADMATSVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKLFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  ++ K
Sbjct: 363 EGTQEIQRLVISRMITK 379


>gi|158319685|ref|YP_001512192.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139884|gb|ABW18196.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 379

 Score =  315 bits (807), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 146/376 (38%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++  + G     + + +                Y MA  E 
Sbjct: 26  PLAAEIDEEERFPI--ETVKKMSNTGFMGIPFPKKYGGEGGDNLG-------YAMAVEEL 76

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +   T+  +V+  T+   H  +  +  + E       P+ K       GLTE   G
Sbjct: 77  SRVCA---TTGVIVSAHTSLGAHPIY--EFGTEEQKQKYLVPLAKGEKLGAFGLTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD +A  +      D  Y L+G K F+++   +  +I++A  +  VG   +   + D   
Sbjct: 132 TDASAQQTTAVLDGD-SYILNGSKIFITNAGYAHIYIIMAMTDKSVGTRGISAFIVDADT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G      + K+G + +AT EL F N        L     G    MK L    +  A  +
Sbjct: 191 PGFTVGPKEKKLGIKGSATCELIFENCRIPKENLLGKEGKGFGIAMKTLDGGRIGIAAQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L E +HY + R   G  +      +  +AD+A  + A+  L ++ A++ D   
Sbjct: 251 LGIAQGALDETVHYVKERKQFGKPISAFQNTQFQLADMAAKVEASRLLVYKAAHNKDMGL 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EAA A       K +  + A  V  +A++  GG GY  E  + R  R++    I  
Sbjct: 311 PYSYEAAMA-------KLFASEAAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 364 GTSEVQRMVIAAGLLK 379


>gi|158319150|ref|YP_001511657.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139349|gb|ABW17661.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 379

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+ E  P     +++    G     + + +        A+ +    L  +    
Sbjct: 26  PLAEEVDEKEMFPV--ETVKKLARYGFMGIPFPKEWGGSGGDSIAYAMAVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    T    + + P + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLGAAPIYEFGTKEQKEKYLPSLASGE-------------KLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  +      D  Y L+G K F+++   +D +I++A  +   G   +   + +  
Sbjct: 131 GTDASAQQTIAVLDGDH-YILNGSKIFITNAGYADIYIIMAMTDKSQGTRGISAFIVEAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G + ++T EL F N        L     G    MK L    +  A  
Sbjct: 190 TPGFSIGKKESKLGIKGSSTCELVFENCRIPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L E + Y + R   G  +      +  +AD+A  I AA  L ++ A    E 
Sbjct: 250 ALGIAQGALDETVSYVKERKQFGKSISYFQNTQFQLADMATKIEAARLLVYKAAFLKQEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S EAA A       K +  + A  V  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 LPYSNEAAMA-------KLFASETAMEVTVKAVQLHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 363 EGTSEVQRMVISAQLLK 379


>gi|332971447|gb|EGK10401.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 396

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 142/378 (37%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
            ER ++  F       + R    G+    W      V     ++ I    L  +      
Sbjct: 45  AERDEQERFDRPIFDQMGRL---GMTGIPWPEEVGGVGSDFLSYVIAVEELSRVCASTGV 101

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    ++  +     P   + +               P+ + +     GLTE   G+
Sbjct: 102 TLSAHLSLASWPIYKFGNPEQKERFL-------------RPLAEGTKLGAYGLTEPGSGS 148

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D A + +   +  D  Y L+G+K F+++   ++ +++ A  +       V   + +    
Sbjct: 149 DAAGMRTTAVRDGDA-YILNGNKIFITNGGEAEIYVVFAVTDPEKKHHGVTAFIVEKETP 207

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F +    +    N      +  KI ++ LD     ++ 
Sbjct: 208 GFSIGKKEQKLGIRSSPTTEIIFEDCRIPV---ENRLGEEGQGFKIAMMTLDGGRNGIAA 264

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A  YA+ R   G  +     ++  +AD+A  I AA  L+++ A    +
Sbjct: 265 QAVGIAQGALDAATAYAKERKQFGKPIGKLQAIQFKLADMATQIEAARLLTYQAAWLESQ 324

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                + +A A       K +    A  V  EA++  GG GY  E  + R  R++    I
Sbjct: 325 GLPYGKASAMA-------KLYAGDAAMQVTTEAVQVFGGYGYTREYPVERFMRDAKITQI 377

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N L K
Sbjct: 378 YEGTNEIQRVVIANHLMK 395


>gi|228955589|ref|ZP_04117590.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804092|gb|EEM50710.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 379

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 149/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+  G  +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGGEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|229181590|ref|ZP_04308915.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228601786|gb|EEK59282.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 379

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+  G  +  K+ +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGGEGQGFKVAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|229153504|ref|ZP_04281682.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228630108|gb|EEK86759.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
          Length = 379

 Score =  314 bits (805), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 149/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAEIGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+  G  +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGGEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|229033974|ref|ZP_04188927.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|229176017|ref|ZP_04303512.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228607449|gb|EEK64776.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228728349|gb|EEL79372.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 379

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 149/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM + +     GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGTKIGAYGLTEPSSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|163943029|ref|YP_001647913.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229014510|ref|ZP_04171628.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229064991|ref|ZP_04200289.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229136160|ref|ZP_04264913.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|229170050|ref|ZP_04297741.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|163865226|gb|ABY46285.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228613397|gb|EEK70531.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228647319|gb|EEL03401.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228716292|gb|EEL68004.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|228746860|gb|EEL96745.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 379

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPSSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPDSKQRGTSAFIVESDTL 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIIFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQSALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|228924077|ref|ZP_04087353.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229193594|ref|ZP_04320538.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228589899|gb|EEK47774.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228835567|gb|EEM80932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 379

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|187923432|ref|YP_001895074.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187714626|gb|ACD15850.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 588

 Score =  314 bits (804), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 136/488 (27%), Positives = 229/488 (46%), Gaps = 30/488 (6%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKELEL----LGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD     L+  +    +  ELE     LG+   S      A  A+ N PQ
Sbjct: 16  PDSRGINFFTSDPDFARLLKLHLGDTLFDELESQLVSLGQRASS-ELDMWALSADKNPPQ 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           LH     GE    ++ HP + AL R +  + GL     +            K     L++
Sbjct: 75  LHHRTRRGEALQSIDKHPDYVALERVAYAELGLAAMSHETRDGKKSPPPLVKYALTFLFV 134

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A+      +S + +    +     P +   + P + SR++D         T     + +
Sbjct: 135 QAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPMLASRDFD---------TLFQGAMFM 185

Query: 203 TEKRGGTDIAAITSQG----QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GR 252
           TE+  G+D+A I ++         D  + L G KWF S+  +D  ++LA+ +        
Sbjct: 186 TEQAAGSDVARIATRASLETDANGDETWRLYGDKWFCSNADADLAMVLARPDTAPAGING 245

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + DM
Sbjct: 246 LGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGALAYLIGEVGRGFHQMADM 305

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L + + +   MR +L EA+H AR R   G  LID P+M+R +  + L    A ++
Sbjct: 306 INMSRLSNGVRAAGLMRRALTEALHIARHREAFGRKLIDMPLMQRQLLKMMLPAEQARSM 365

Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             R+A   ++A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S A
Sbjct: 366 FMRIALLLEQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDA 425

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRD 489
           R  R++   SI  G+ N + LD+    ++   L E L + L+  LG++G     + +LR 
Sbjct: 426 RLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRTYLQDLLGAAGLPAASLALLRA 484

Query: 490 SISLCKED 497
           +++   + 
Sbjct: 485 TLARACDA 492


>gi|91782819|ref|YP_558025.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91686773|gb|ABE29973.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 587

 Score =  313 bits (803), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 138/501 (27%), Positives = 235/501 (46%), Gaps = 32/501 (6%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCT 69
             QP+     +   P   G+N ++SD     L+  +    +  ELE     LG+   S  
Sbjct: 5   TAQPAHGSSNI---PDSRGINFFTSDPDFERLLKLHLGEALFHELEGQLVSLGQRA-SDE 60

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVV 128
               A  A+ N PQL      GE    ++ HP + AL R +  + GL     +       
Sbjct: 61  LDIWAASADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAELGLAALSHETRDGKQS 120

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                K     L++ A+      +S + +    +     P +   + P++ SR++D    
Sbjct: 121 PPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPRLASRDFD---- 176

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCLSGHKWFLSSPMSDAFIM 245
                T     + +TE+  G+D+A I ++   +  +DG  + L G KWF S+  +D  ++
Sbjct: 177 -----TLFQGAMFMTEQAAGSDVARIATRASLETEADGQTWRLYGDKWFCSNADADLAMV 231

Query: 246 LAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           LA+ +        +G FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+
Sbjct: 232 LARPDTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYLI 291

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G++      + DM  +  L + + +   MR +L EA+H AR R   G  LID P+M+R +
Sbjct: 292 GEVGRGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQL 351

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMEC 418
             + L    A ++  R+A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME 
Sbjct: 352 LKMMLPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEV 411

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG+GYIEE S AR  R++   SI  G+ N + LD+    ++   L E L + L+  LG+
Sbjct: 412 RGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLQDLLGA 470

Query: 479 SG--KKVITILRDSISLCKED 497
           +G     + +LR +++   + 
Sbjct: 471 AGLPPASLALLRSTLARACDA 491


>gi|310826162|ref|YP_003958519.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612]
 gi|308737896|gb|ADO35556.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612]
          Length = 379

 Score =  313 bits (803), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 141/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + + + +G     + +          A+ +    L  +    
Sbjct: 26  PIAQEVDEEERFP--QETVDKMVKNGFMGIPFAKEVGGQGCDTLAYILAVEELSRVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +      +    TP   + + P++ S E             +    GLTE   
Sbjct: 84  GVILSAHTSLGTDPIRKFGTPEQKEKYLPRLASGE-------------LLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   ++     D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASGQQTKAVLEGDH-YVLNGTKIFITNGGKADVYIIFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G      + K+G R ++T EL F +        L     G    M+ L    +  A  
Sbjct: 190 YPGFSIGTKEKKMGIRGSSTTELIFEDCIVPKENLLGKEGKGFGIAMQTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +  E + Y + R   G  +      +  +AD+   I AA  L ++ A + D  
Sbjct: 250 ALGLAQGAFDETVAYVKERKQFGRSIAKFQNTQFKLADMYARIEAARNLVYKAAIAKDTQ 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S EAA A       K +  + A AV  E ++ +GG GY  +  + R  R++    I 
Sbjct: 310 KVFSVEAATA-------KLFAAETAMAVTTECVQLLGGYGYTRDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 363 EGTSEVQRMVISGNVLK 379


>gi|229072808|ref|ZP_04206007.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228710299|gb|EEL62274.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 379

 Score =  313 bits (803), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|154249274|ref|YP_001410099.1| acyl-CoA dehydrogenase domain-containing protein [Fervidobacterium
           nodosum Rt17-B1]
 gi|154153210|gb|ABS60442.1| acyl-CoA dehydrogenase domain protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 379

 Score =  313 bits (803), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 138/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+ E+ P     +++    G+    + +            I A           
Sbjct: 26  PLAQKVDEEEYFPI--ETVKKMAEIGMMGIPFPKEIGGAGGDYLTYIMAVEELAKVCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +     +    T +  + +               P+ K  +     LTE   
Sbjct: 84  SIILSAHTSLCCWPIFNFGTQQQKEKYL-------------RPLLKGEMIGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +  + + D  Y L+G K F+++  ++D FI+ A  +   G   +   + + S
Sbjct: 131 GSDAGNQQTTAKLVGD-YYILNGSKIFITNGGVADVFIVFAMTDKSKGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R ++T EL F +         N+        KI L  LD   + V
Sbjct: 190 FEGFKIGKPEKKMGIRGSSTTELIFEDCKVP---KENLLGSEGMGFKIALQTLDGGRIGV 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               + +AE      + Y + R   G  +     ++  IAD+     AA  L +  A   
Sbjct: 247 GAQALGIAEGAIDEVLRYVKERKQFGKSIGSFQGIQWYIADMITKTRAAKLLVYDAAIKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    S +AA A+        +   +A  V  +A++  GG GY  +  + R  R++   
Sbjct: 307 DKGILTSADAAMAKK-------YASDVAMEVTTQAVQIFGGYGYTRDYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +     K
Sbjct: 360 QIYEGTNEVQKMVIAAQYIK 379


>gi|150019864|ref|YP_001312118.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149906329|gb|ABR37162.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 634

 Score =  313 bits (802), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 76/398 (19%), Positives = 155/398 (38%), Gaps = 34/398 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P+   +++R    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPS--EVVQRLADMGVMGIPYSKEYGGAGLDVISYAIAVEELSRVDGGTGVILSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +A        + +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGTYPIAAFGNEEQKQKYL-------------VPLAKGEKLGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +I+ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEGD-YYILNGEKIFITNGGEADIYIVFAVTTPNIGTRGISAFIVEKGSEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F++         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNDVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+A  + AA  L +  A      +  
Sbjct: 253 IAQGAYENALEYSKERVQFGKPICQQQIIAFKLADMATKLRAARFLIYSAAELKGNHEHY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYLKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
                + +   +       E +  T  +      KKVI
Sbjct: 366 NEIQRVVIAANIIGKMPKTESVAKTSREPATGYRKKVI 403


>gi|52140219|ref|YP_086610.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51973688|gb|AAU15238.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 379

 Score =  313 bits (802), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|332973175|gb|EGK11110.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 604

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 114/503 (22%), Positives = 222/503 (44%), Gaps = 39/503 (7%)

Query: 26  NQPPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYN 80
           N P   +  N Y  D  L  L+  +          +EL  LG  V     Q  A      
Sbjct: 20  NIPRPTVEPNFYLEDFNLQYLMRRYLPASMHQWADRELTHLGARVAGPIDQRAAYTDGEG 79

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L  Y   GE   ++  +  +   ++     G+   ++ R    + RK  +     + 
Sbjct: 80  QPRLVRYNRRGEEISQIVKNEGYLKTVKEVYGAGIVGYLY-REVPELGRKAPYLYSYLQG 138

Query: 141 YLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL+++ E G     ++T  +A ++    TP   + +   + S           ++T    
Sbjct: 139 YLLSESEPGFYCPVTLTLSAAHLIDRYGTPAQKETYLTGLTS---------LDEETLYEG 189

Query: 199 GLGLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-- 253
              LTE++GG+D+ A  +          G+Y L+G K+F S+  +    +LA++      
Sbjct: 190 ATWLTERQGGSDVGANLTVATADPEAGPGVYRLTGEKFFASNAGAMVATVLARIHPDRPG 249

Query: 254 ----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               G FLVP +  DG+ N +  +RLK K+G  +  + E+      G+L+GD +     +
Sbjct: 250 TRGLGLFLVPWIKPDGTRNRIYVRRLKEKLGVNAVPSAEVILEEAEGYLIGDPDQGFKYM 309

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +   +  + +A+ +   MR +  EA HYAR RH  G  ++   ++K+ +A++ +++   
Sbjct: 310 AEALNISRICNAVAATGIMRRAWYEAFHYARERHAFGRPILQYSMVKQTLAEMLMELEVN 369

Query: 370 TALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           T  +F + + FD+    ++  E+   AR++  + KY   + A  +  +A+E +GG+GYIE
Sbjct: 370 TGSTFDMIHLFDKVNSGQAAPEKEVMARMLISLLKYRTGEAAKEMTHQAIETLGGNGYIE 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFST--------LEQDL 476
           E    R  R++   ++  G+ N + LD+  ++ K     +F Q+           L Q  
Sbjct: 430 EYVTPRLLRDAQVLTVWEGTANILALDLWRVIRKFRADEIFLQVMHREVEGLTHPLSQPF 489

Query: 477 GSSGKKVITILRDSISLCKEDKG 499
            S  +  +  +R++++  K+   
Sbjct: 490 KSDLEGRLRQIRENLTFLKDQPE 512


>gi|228936626|ref|ZP_04099420.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229199466|ref|ZP_04326129.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228584042|gb|EEK42197.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228823061|gb|EEM68899.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 379

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|313675612|ref|YP_004053608.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942310|gb|ADR21500.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 574

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 145/545 (26%), Positives = 240/545 (44%), Gaps = 41/545 (7%)

Query: 24  ALNQPPL---FIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELAR 75
             NQ          N + SD +L   +           +  +L   GE   +     L+ 
Sbjct: 10  VQNQVVEKEYRSSQNFFKSDLILQDYLKRKVSKKGLDYLTPKLNKTGEAAATR-MDTLSL 68

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            A+ N PQL      GE  D+V+FHP++  L++ +I   +    W+ + +   + + H +
Sbjct: 69  DADKNGPQLVKRNFFGEDIDEVKFHPSYQELMQIAIDSEMFKVKWEPNLKEAFKHERHSL 128

Query: 136 RAA--RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A   LY M++L     +  +   A ++ L  T    K   P I++ E          +
Sbjct: 129 GFAPGYLYAMSELGQYCPLCMTDGVARLIDLHCTEEDKKRLLPHIYTTE---------LR 179

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 + LTEK GG+D+     + +K  DG Y LSG KWF S+  ++    LA+ +   
Sbjct: 180 DFFTGAMFLTEKSGGSDVGRNLVKAEKQKDGSYLLSGEKWFCSNVNAELIFALARTDESK 239

Query: 254 ------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                   FL+ + L DGS N L   RLK+K+G RS A+ E     T G L+GD      
Sbjct: 240 EGTRGLSIFLIEKTLPDGSKNKLPIVRLKDKLGVRSMASAECILDGTVGMLVGDEFNGFK 299

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM  L  L ++I ++SG R +L EA ++   R   G   I+ P++K  + ++     
Sbjct: 300 IMTDMINLSRLYNSIAALSGARRALVEAYNFNLFRKSFGKTAIEHPLIKEKLFELGSLNV 359

Query: 368 AATALSFRLANSFDEAKSRSEEAA--------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           A   L++R   + D+A + +E A+          R++ P+ K W  + A  +  E+ME +
Sbjct: 360 ANFYLTWRAIEALDKADNGNESASRQTENEKHLGRLLTPMVKKWSAEKAVYITRESMELM 419

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GYIE+  I +  R+     I  G+GN M LD+L    K ++  + +   +++ LG  
Sbjct: 420 GGIGYIEDGVIPKIMRDVMVLPIWEGAGNIMTLDMLRASFK-SDGLKVMMEEIKKSLGKI 478

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            +   TIL     L  + K L  F  E+  L   A   +      +  +F  +  LDN  
Sbjct: 479 SQYDDTILEHLKELESKLKSL--FKMEQDELELHAKYFFEK----LTTLFQLSLILDNWE 532

Query: 540 STHCM 544
            T+  
Sbjct: 533 DTNEA 537


>gi|30023372|ref|NP_835003.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|218232901|ref|YP_002370118.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|228961605|ref|ZP_04123214.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051012|ref|ZP_04194560.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229112755|ref|ZP_04242287.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130590|ref|ZP_04259546.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229147881|ref|ZP_04276222.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|296505765|ref|YP_003667465.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|29898933|gb|AAP12204.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|218160858|gb|ACK60850.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|228635531|gb|EEK92020.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228652929|gb|EEL08811.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228670589|gb|EEL25901.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228722321|gb|EEL73718.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228798087|gb|EEM45091.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296326817|gb|ADH09745.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis BMB171]
          Length = 379

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMRVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|1903328|emb|CAB07496.1| butyryl-CoA dehydrogenase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 379

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 144/397 (36%), Gaps = 34/397 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R       +     P  +  D  E  P     +R+   + +    +   +      
Sbjct: 9   QEMVRRVVREFAE-KEVAPKAKEIDITEEFP--WDTVRKMAQNDMMGIPYPEEYGGAGGD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKA 189
               I A      A    G ++S   +  S  +    T    + +               
Sbjct: 66  YLSYIIAVEEISRACATTGVILSAHTSLGSFPIYQWGTEEQKRKYL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K       GLTE   GTD A   +      D  Y L+G  +  +   +D +I+ A  
Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAGQQTTAVLDGDH-YVLNGSIFITNGGKADIYIIFAMT 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G    +++ K+G R+++T EL F +         N+     
Sbjct: 172 DKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDCIVP---KENLLGKEG 228

Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +  LD   + ++  R+ +A+A     I YA+ R   G  +     ++  IAD+A
Sbjct: 229 EGFKIAMATLDGGRIGIAAQRLGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIADMA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+  L +  A         + EAA A       K +  + A  V  + ++  GG G
Sbjct: 289 TRINASRWLVYNAAWRKQVGLPYTMEAAMA-------KLYASETAMFVTTKTVQIFGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + ++  + R  R++    I  G+     + +   L K
Sbjct: 342 FTKDYPVERFMRDAKITEIYEGTSEVQKMVISGNLLK 378


>gi|228930350|ref|ZP_04093354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228829336|gb|EEM74969.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 379

 Score =  313 bits (801), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFNQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|30265365|ref|NP_847742.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530907|ref|YP_022256.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188176|ref|YP_031429.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|65317319|ref|ZP_00390278.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|165871283|ref|ZP_02215932.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167635753|ref|ZP_02394063.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167640413|ref|ZP_02398677.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170688154|ref|ZP_02879365.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170708036|ref|ZP_02898484.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177651922|ref|ZP_02934505.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190569104|ref|ZP_03022003.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196036515|ref|ZP_03103910.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|227818104|ref|YP_002818113.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228949062|ref|ZP_04111334.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124845|ref|ZP_04254023.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|229601594|ref|YP_002869556.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687217|ref|ZP_05151075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254724696|ref|ZP_05186479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735270|ref|ZP_05192979.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744473|ref|ZP_05202153.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254755811|ref|ZP_05207843.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254762151|ref|ZP_05213997.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30260043|gb|AAP29228.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47506055|gb|AAT34731.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182103|gb|AAT57479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164712950|gb|EDR18478.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167511633|gb|EDR87015.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167528862|gb|EDR91619.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170127009|gb|EDS95888.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170667847|gb|EDT18599.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082626|gb|EDT67690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190559772|gb|EDV13758.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|195990848|gb|EDX54821.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|227005111|gb|ACP14854.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228658636|gb|EEL14298.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228810635|gb|EEM56984.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229266002|gb|ACQ47639.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 379

 Score =  313 bits (801), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR R+  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERYQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|229082555|ref|ZP_04215018.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228700987|gb|EEL53510.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 379

 Score =  313 bits (801), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|42784517|ref|NP_981764.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|42740449|gb|AAS44372.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
          Length = 379

 Score =  313 bits (801), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|47569766|ref|ZP_00240438.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|206975851|ref|ZP_03236762.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217962830|ref|YP_002341408.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|222098813|ref|YP_002532871.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228988568|ref|ZP_04148655.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229142084|ref|ZP_04270609.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|47553562|gb|EAL11941.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|206745945|gb|EDZ57341.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217064522|gb|ACJ78772.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|221242872|gb|ACM15582.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228641373|gb|EEK97679.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228771185|gb|EEM19664.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|324329291|gb|ADY24551.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 379

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|70733886|ref|YP_257526.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68348185|gb|AAY95791.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 573

 Score =  312 bits (800), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 139/547 (25%), Positives = 234/547 (42%), Gaps = 50/547 (9%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N +  D+ L AL+  +            L+ LG          LA  A+ N P 
Sbjct: 15  PDSRGINLFECDAGLAALLQVYLPSAVYQQWLPTLQHLGARAGG-ELDVLALSADKNPPV 73

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP +  L R +  +    ++  +   P        I+ A  YL 
Sbjct: 74  LQPRTRRGENLQSIAKHPDYVTLERVAFAELGLAAMSHQPGGPPP-----LIKYALTYLF 128

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    TP V   + P++ S+++         +T     + 
Sbjct: 129 VQAEFGLCCPVSMTDSLTRTLCKFGTPEVVARYLPQLQSQDF---------ETLFQGAMF 179

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D++   ++  ++ DG + L G KWF S+P +D  ++LA+ E        V  
Sbjct: 180 MTEQAAGSDVSRTETRA-RLEDGQWRLFGEKWFCSNPDADLAMVLARPEDAPPGMAGVTL 238

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++L DGS N    QRLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 239 FLLPKVLPDGSRNHYRIQRLKDKLGSRSMASGEITLEGATAYLIGEVGRGFQQMADMINM 298

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR  L+EA++ AR+R   G  LI+ P+M+R +  + L    A ++  +
Sbjct: 299 SRLSNGVRAAGLMRRGLSEALYIARQRRAFGKHLIEMPLMQRQLLKMMLPAEQARSMFMQ 358

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A+    A    E A    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR  
Sbjct: 359 IASLLPRADGGDETARKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLV 418

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILR 488
           R++   SI  G+ N + LD+   + +   L         L +  +    S       +LR
Sbjct: 419 RDAHLGSIWEGTSNIVALDIARAVTREQALEPLQGYLAGLLAEADLPPASRRLFDSALLR 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
                    +        ++      + LY    + I   +   R   +          R
Sbjct: 479 TVTGFHAVAQQRRDEQVRQV-----GSVLY-HLASAIFMAWEAARQGSDHR--------R 524

Query: 549 FNAAHII 555
              AH++
Sbjct: 525 LALAHLV 531


>gi|256846241|ref|ZP_05551698.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256718010|gb|EEU31566.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 636

 Score =  312 bits (800), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|33603021|ref|NP_890581.1| putative oxidoreductase [Bordetella bronchiseptica RB50]
 gi|33568652|emb|CAE34410.1| putative oxidoreductase [Bordetella bronchiseptica RB50]
          Length = 569

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 139/537 (25%), Positives = 232/537 (43%), Gaps = 26/537 (4%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDS-----LLVALIANFPSVVHKELELLGEYVL 66
           M+ +     S  A +  P   G+N + +D          L A+    +   L+ LG    
Sbjct: 1   MDTLSSTDTSATAASPVPDARGLNLFRADPYAAGLARCYLPADLCDHLLPHLDRLGALAG 60

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-- 124
                ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R    
Sbjct: 61  GR-MDELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVL 119

Query: 125 -EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             P     A K   + L++ A+      +S + + A  +     P + +   P++ ++++
Sbjct: 120 GWPDPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDF 179

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           D   +  M          +TE+  G+D++A T   Q  +DG + L G KWF S+P +   
Sbjct: 180 DQLQQGAMF---------MTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFA 230

Query: 244 IMLAQVEGRVGCFLV-----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++LA+ E   G   V     PR L DGSPN     RLK+K+G RS A+ E+       +L
Sbjct: 231 MVLARSEPNAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWL 290

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G        + DM     L + + +   MR +L EA+ +A++R   G  LID P+M+R 
Sbjct: 291 VGQRGQGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQ 350

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A +A+    A ++ F+ A +   A     EAA  RI+ P+ K+  C+ A  V  +AME 
Sbjct: 351 LAKMAMRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEV 410

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DL 476
            GG GYIEE    R  R++   SI  G+ N + LDVL  + K  +    L   ++     
Sbjct: 411 RGGCGYIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRK-ADALPALQRHVQALLAA 469

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           G+     +  ++                 E+  LA  AA+     +   A  +   R
Sbjct: 470 GAPCPPELAPIQARAFDGAYALAAHAAAHERDDLARQAASALYHVVAIAALRWEAAR 526


>gi|294786063|ref|ZP_06751348.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|294486285|gb|EFG33650.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 636

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|218900467|ref|YP_002448878.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228905095|ref|ZP_04069127.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228968470|ref|ZP_04129458.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218543147|gb|ACK95541.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228791176|gb|EEM38790.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228854538|gb|EEM99164.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 379

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 147/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A              + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTNPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|256026640|ref|ZP_05440474.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           D11]
 gi|289764636|ref|ZP_06524014.1| acyl-COA dehydrogenase [Fusobacterium sp. D11]
 gi|289716191|gb|EFD80203.1| acyl-COA dehydrogenase [Fusobacterium sp. D11]
          Length = 637

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDAVQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|218906520|ref|YP_002454354.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|218536716|gb|ACK89114.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
          Length = 379

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|33598128|ref|NP_885771.1| putative oxidoreductase [Bordetella parapertussis 12822]
 gi|33566686|emb|CAE38896.1| putative oxidoreductase [Bordetella parapertussis]
          Length = 569

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 139/537 (25%), Positives = 232/537 (43%), Gaps = 26/537 (4%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDS-----LLVALIANFPSVVHKELELLGEYVL 66
           M+ +     S  A +  P   G+N + +D          L A+    +   L+ LG    
Sbjct: 1   MDTLSSTDTSATAASPVPDARGLNLFRADPYAAGLARCYLPADLCDHLLPHLDRLGALAG 60

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-- 124
                ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R    
Sbjct: 61  GR-MDELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVL 119

Query: 125 -EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             P     A K   + L++ A+      +S + + A  +     P + +   P++ ++++
Sbjct: 120 GWPDPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDF 179

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           D   +  M          +TE+  G+D++A T   Q  +DG + L G KWF S+P +   
Sbjct: 180 DQLQQGAMF---------MTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFA 230

Query: 244 IMLAQVEGRVGCFLV-----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++LA+ E   G   V     PR L DGSPN     RLK+K+G RS A+ E+       +L
Sbjct: 231 MVLARSEPDAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWL 290

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G        + DM     L + + +   MR +L EA+ +A++R   G  LID P+M+R 
Sbjct: 291 VGQRGQGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQ 350

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A +A+    A ++ F+ A +   A     EAA  RI+ P+ K+  C+ A  V  +AME 
Sbjct: 351 LAKMAMRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEV 410

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DL 476
            GG GYIEE    R  R++   SI  G+ N + LDVL  + K  +    L   ++     
Sbjct: 411 RGGCGYIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRK-ADALPALQRHVQALLAA 469

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           G+     +  ++                 E+  LA  AA+     +   A  +   R
Sbjct: 470 GAPCPPELAPIQARAFDGAYALAAHAAAHERDDLARQAASALYHVVAIAALRWEAAR 526


>gi|237741102|ref|ZP_04571583.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|229430634|gb|EEO40846.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13]
          Length = 636

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|237745307|ref|ZP_04575788.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1]
 gi|229432536|gb|EEO42748.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1]
          Length = 637

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|167589972|ref|ZP_02382360.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 586

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 135/493 (27%), Positives = 226/493 (45%), Gaps = 38/493 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N +++D  L  L+         + +  +L  LG  V S    E A  A+ + P 
Sbjct: 16  PDTRGINFFTADPDLGVLLRLHLGDARYAELEPQLHALGARV-SGELDEWAACADKHPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      GE   +++ HPA+ AL R +  + GL      R         +  ++ A  +L
Sbjct: 75  LEHRNRRGEPVQRIDKHPAYVALERVAYAELGLASLSHQRV------PASPLVKYALTFL 128

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             Q E G     S+T +    L     P +   + P + SR++D         T     +
Sbjct: 129 FVQAEFGLCCPVSMTDSLTRTLRRFGEPELVARYLPMLASRDFD---------TLYQGAM 179

Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----- 251
            +TE+  G+D+  I ++  +      D ++ L G KWF S+  +D  ++LA+ +G     
Sbjct: 180 FMTEQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNADADLAMVLARPDGAPDGI 239

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+        L+G++      + 
Sbjct: 240 KGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEGAHAHLIGEIGRGFHQMA 299

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           DM  +  L + + +   MR ++ EA+H A  R   G  LI+ P+M+R +  + L   AA 
Sbjct: 300 DMINMSRLSNGVRAAGLMRRAMNEALHVAMHREAFGRKLIEMPLMQRQLMKMLLPTEAAR 359

Query: 371 ALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  R+A    +A +   EAA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S
Sbjct: 360 TMFIRIALLLQQADAGDAEAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWS 419

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS--GKKVITIL 487
            AR  R++   SI  G+ N + LDV    ++   L + L + L   LG +       T+ 
Sbjct: 420 DARLVRDAHLGSIWEGTSNIVALDVARAAQRERAL-DALHAFLADRLGQAPLPDASRTVF 478

Query: 488 RDSISLCKEDKGL 500
           R  ++   +    
Sbjct: 479 RRVLARATDALAQ 491


>gi|317402306|gb|EFV82883.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 566

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 132/525 (25%), Positives = 227/525 (43%), Gaps = 28/525 (5%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVL 66
           M+   QP+ +       P   G+N + +D     L   +      + +   L+ LGE   
Sbjct: 1   MDSPAQPAVATAT--PVPDARGLNLFRADPYAAPLARRYLPAALHAHLLPHLDRLGELAG 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-- 124
                ELA  A+ + P L      G    +++ HPA+  L R +  +    ++  R    
Sbjct: 59  G-VMDELAATADKHPPTLSVRSRAGADESRIDKHPAYVELERLAYSEFGLAALSHRGGVL 117

Query: 125 -EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             P     A K   + L++ A+      +S + + A  +     P + +   P++ S+++
Sbjct: 118 GWPEPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDF 177

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           D   +  M          +TE+  G+D++A      +  DG + + G KWF S+P +   
Sbjct: 178 DALRQGAMF---------MTEQGAGSDVSATEVTATRQDDGSWRIHGDKWFCSNPDAGFA 228

Query: 244 IMLAQVEGRVGCFLV-----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++LA+ E   G   V     PR L DG+ N     RLK+K+G RS A+ E+       +L
Sbjct: 229 MVLARSESEPGLKGVSLFLLPRDLADGTHNHYRILRLKDKLGTRSMASGEIRLEGAVAWL 288

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + DM     L + + +   MR ++ EA + ++ R   G  LID P+M+R 
Sbjct: 289 VGERGKGFKHMADMINNSRLSNGMRAAGLMRRAVTEATYVSQHRRAFGKRLIDMPLMQRQ 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +  + +    A ++ F+ A +  +A     + A ARI+ P+ K+  C+ A  V  +AME 
Sbjct: 349 LVKMTVWSEQARSVMFQTARALADADQGRGDPALARILTPLIKFRACRDARKVTGDAMEV 408

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG GYIEE +  R  R++   SI  G+ N + LDVL  + K  +L   L   ++Q L  
Sbjct: 409 RGGCGYIEEWTEPRLVRDAHLGSIWEGTSNIVALDVLRAIRKEGSLP-ALRRHVDQLLAE 467

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTE--KIALASSAAALYRAG 521
                  +        +    LA    +     LA  AA+L    
Sbjct: 468 GLPCPPALAATQADALERTYALAAHAAQGDHAELARQAASLLYHA 512


>gi|229164290|ref|ZP_04292222.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228619173|gb|EEK76067.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 379

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            +R ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AQRDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM + +     GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGTKIGAYGLTETGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVIFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A DI AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDIEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|228942488|ref|ZP_04105024.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975420|ref|ZP_04135975.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982055|ref|ZP_04142347.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228777593|gb|EEM25868.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228784214|gb|EEM32238.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817171|gb|EEM63260.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943139|gb|AEA19035.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 379

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPASGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|170758768|ref|YP_001788163.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169405757|gb|ACA54168.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 635

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 148/369 (40%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLAKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A     +G   +   + + S  G  +
Sbjct: 137 TETTAVLEGDH-YILNGEKIFITNAGEADIYVIFAVTTPNIGTRGISAFIVEKSFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+A  + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYEHALEYSKERIQFGKPICHQQIIAFKLADMATKLRAARLLVYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|148380801|ref|YP_001255342.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933447|ref|YP_001385086.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153937098|ref|YP_001388555.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. Hall]
 gi|148290285|emb|CAL84406.1| acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|152929491|gb|ABS34991.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|152933012|gb|ABS38511.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A str. Hall]
          Length = 635

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 147/369 (39%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDAISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLGKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A      G   +   + + S  G  +
Sbjct: 137 TETTAVLEGDH-YILNGEKIFITNAGEADIYVVFAVTTPNTGTRGISAFIVEKSFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+A  + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICHQQIISFKLADMATKLRAARLLVYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|288554424|ref|YP_003426359.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545584|gb|ADC49467.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 380

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 139/359 (38%), Gaps = 32/359 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +    GL    W   +  +     ++ I    L  +       L + +  +   V    
Sbjct: 43  DKMAELGLTGIPWPEEYGGIGADYVSYCIAVEELSRVCASTGVTLSAHTSLAGWPVYKFG 102

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + +               PM +       GLTE   G+D A + +   +  D  Y
Sbjct: 103 TEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGSDAARMKTTAIEDGDH-Y 148

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  ++D +I+ A  +           + +    G    + + K+G RS+ 
Sbjct: 149 VLNGSKIFITNGGIADIYIVFAVTDPEARHKGTTAFIVEADTPGFSVGKKEKKLGIRSSP 208

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYA 339
           T E+ F +         N+     E  K+ ++ LD     ++   V +A+     A+ YA
Sbjct: 209 TTEIIFEDCRVP---KENMLGKEGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVGYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +  Q  +   +AD+A  I A+  L+++ A    E  S  +E+A        
Sbjct: 266 KERKQFGKPIGAQQGIGFKLADMATKIEASRLLTYQAAWRESEGVSYGKESAM------- 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +K +    A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L
Sbjct: 319 SKLFAGDTAMDVTVEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTNEIQRLVISKML 377


>gi|260495500|ref|ZP_05815626.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|260197037|gb|EEW94558.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
          Length = 637

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  I  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKIRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGAGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|221214813|ref|ZP_03587782.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221165352|gb|EED97829.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 583

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 141/515 (27%), Positives = 231/515 (44%), Gaps = 39/515 (7%)

Query: 11  AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYV 65
             +  H P+     +   P   G+N +S D  L AL+       H      +L  LG  V
Sbjct: 1   MNDTAHTPAAGASNI---PDSRGLNFFSVDPDLGALLRLHLGDAHYTELEPQLRALGARV 57

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSF 124
            S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL         
Sbjct: 58  -SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDA 116

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSRE 182
            P        ++ A  +L  Q E G     S+T +    L       +   + P + SR+
Sbjct: 117 APP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDRELVARYLPMLASRD 170

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSP 238
           +D         T     + +TE+  G+D+  I ++  +      D ++ L G KWF S+ 
Sbjct: 171 FD---------TLYQGAMFMTEQAAGSDVGRIATRATRDTDAQGDTVWRLYGDKWFCSNA 221

Query: 239 MSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+   
Sbjct: 222 DADLAMVLARPDGAPNGIHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLE 281

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               +L+G++      + DM  +  L + + +   MR ++ EA+H A  R   G  LID 
Sbjct: 282 GAHAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDM 341

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAV 411
           P+M+R +  + L   AA  +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V
Sbjct: 342 PLMQRQLMKMLLPTEAARTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRV 401

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV     +   L + L + 
Sbjct: 402 TGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAARREQAL-DALRTF 460

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           L   LG++     +       L +   GLAR   +
Sbjct: 461 LGDRLGAAPLPDASRAALRRILARACDGLARVAAD 495


>gi|300117855|ref|ZP_07055622.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|298724719|gb|EFI65394.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 379

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 140/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRAIFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+        KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGRGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|293603574|ref|ZP_06685995.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818010|gb|EFF77070.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 566

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 136/527 (25%), Positives = 232/527 (44%), Gaps = 32/527 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N +++D    AL   +      + +   LE LGE        ELA  A+ + P
Sbjct: 15  VPDSRGLNLFTADPYAAALSQRYLPTALHAHLLPHLERLGELAGG-VMDELAATADKHPP 73

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF---EPVVRKQAHKIRAAR 139
            L      G    +V+ HPA+  L R +  +    ++  R      P     A K   + 
Sbjct: 74  TLSVRSRAGTDESRVDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPMPAAAKYALSH 133

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L++ A+      +S + + A  +     P + +   P++ S+++D   +  M        
Sbjct: 134 LFVQAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDALRQGAMF------- 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV- 258
             +TE+  G+D++A         DG + + G KWF S+P +   ++LA+ E + G   V 
Sbjct: 187 --MTEQGAGSDVSATEVTATAQPDGTWRIHGDKWFCSNPDAGFAMVLARSETQPGLKGVS 244

Query: 259 ----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
               PR LEDGS N     R+K+K+G RS A+ E+       +L+G+       + DM  
Sbjct: 245 LFLLPRDLEDGSHNHYRILRVKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMIN 304

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L + + +   MR ++ EA++ ++ R   G  LID P+M+R +  + +    A  + F
Sbjct: 305 NSRLSNGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARTVMF 364

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A +  +A     + A ARI+ P+ K+  C+ A  V  +AME  GG GYIEE +  R  
Sbjct: 365 QTARALADADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLV 424

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++   SI  G+ N + LDVL  ++K  N    L + +++ L         +        
Sbjct: 425 RDAHLGSIWEGTSNIVALDVLRAIKKE-NSLPALRAHIDRLLADGVPCPPALAALQAEAL 483

Query: 495 KEDKGLARFLT--EKIALASSAAALYRAGMN------DIADVFLENR 533
            +   LA      +   LA  AA+L    ++      + A   LE R
Sbjct: 484 DKSFALAEHAAMGDHAELARQAASLLYHAVSMAALRWEAASAGLETR 530


>gi|229099774|ref|ZP_04230699.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228683663|gb|EEL37616.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 379

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 78/381 (20%), Positives = 147/381 (38%), Gaps = 34/381 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           GP     D+ E       L       GL    W   +  +     A+ I    L  +   
Sbjct: 25  GPTAAERDEEERFD--RELFDHMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCAS 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L + +  +   +    T    + +               PM +       GLTE  
Sbjct: 83  TGVTLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPS 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + + 
Sbjct: 130 SGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVES 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G    + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     
Sbjct: 189 DTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNG 245

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A  
Sbjct: 246 IAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             E     +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++  
Sbjct: 306 ESEGLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     L +  +L K
Sbjct: 359 TQIYEGTQEIQRLVISRMLTK 379


>gi|225182056|ref|ZP_03735487.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167269|gb|EEG76089.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 381

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 141/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P     +++    G         +          I        A    
Sbjct: 26  PNAAKYDETAEFPL--ENIKKLGAQGFMGIPIPEEYGGAGADFLTYILCIEEVSRACAST 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +++   +  +   L   T    + + PK+ S EY                  LTE   
Sbjct: 84  GVILAVHTSVGTFPILNFGTEEQKQKYVPKLASGEY-------------VGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +A+ +  ++  D  Y L+G K F+S+      + + A V+   G   +   L +  
Sbjct: 131 GSDASALRTSAKRDGDD-YVLNGTKIFISNGGHAQVYTVFATVDKGQGTKGITAFLVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G     ++ K+G  ++ T EL F +        L       E  KI +       +  
Sbjct: 190 TPGFKVGAIEKKMGLNADVTTELVFEDCRIPASQRLGKEG---EGFKIAMSLLDGGRIGI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +   + +  EA+ YA+ R   G  + +   +   +AD+A +I AA  L ++ A   
Sbjct: 247 GAQGLGIAQAAYDEALKYAQFREQFGQPIFNNQAIAFKLADMATEIEAARLLVYQAAFRK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +      ++A+ A       K++    A  V  EA++ +GG GY  E  + R  R++   
Sbjct: 307 ENGLPNGKQASMA-------KFYATDTAMKVTTEAVQVLGGYGYSREYPVERLMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEKG 461
            I  G+     L +   +EKG
Sbjct: 360 QIYEGTNQIQRLVISKAIEKG 380


>gi|323490854|ref|ZP_08096052.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus
           donghaensis MPA1U2]
 gi|323395462|gb|EGA88310.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus
           donghaensis MPA1U2]
          Length = 379

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 143/361 (39%), Gaps = 32/361 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +    GL    W   +  +     A+ I    L  +       L + +  +   V    
Sbjct: 43  DKMAELGLTGIPWPEEYGGIGSDYLAYCIAVEELSRVCASTGVTLSAHTSLAGWPVYTFG 102

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + +               PM + +     GLTE   G+D  A+ +  ++  D  Y
Sbjct: 103 TEEQKQKYL-------------RPMAEGTKIGAYGLTEPASGSDAGAMRTSAKEDGDH-Y 148

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  ++D +I+ A  +           + +    G    + + K+G RS+ 
Sbjct: 149 VLNGSKIFITNGGIADIYIVFAVTDPESKHKGTTAFIIEKDFEGFSVGKKERKLGIRSSP 208

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYA 339
           T E+ F N         NV     +  KI +  LD     ++   V +A+     +I YA
Sbjct: 209 TTEIIFDNCRVP---KENVLGELGQGFKIAMQTLDGGRNGIAAQAVGIAQGALDASIDYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  ++    +   +AD+A  I A+  L+++ A       S S+E+A A++MA  
Sbjct: 266 KEREQFGKPIVANQGVSFKLADMATSIEASRLLTYQAAWLESNKLSYSKESAMAKLMAG- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                   A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  ++ 
Sbjct: 325 ------DTAMKVTVEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEVQRLVISRMVT 378

Query: 460 K 460
           K
Sbjct: 379 K 379


>gi|171317918|ref|ZP_02907094.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171096925|gb|EDT41797.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 584

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 39/507 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVL 66
           MN   +  D+  + N  P   G+N +++D  L AL+              +L  LG  V 
Sbjct: 1   MNDTTRTPDAGASGNI-PDSRGINFFTADPDLGALLKLHLGAAQYTRLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLAALSHQPE-- 116

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
                 A  ++ A  +L  Q E G     S+T +    L     P + + + P + SR++
Sbjct: 117 ----AVAPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDF 172

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++  +        ++ L G KWF S+  
Sbjct: 173 D---------TLFQGAMFMTEQAAGSDVGRIATRAVRETHAQGGAVWRLYGDKWFCSNAD 223

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 224 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 283

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L E++H A  R   G  LI+ P
Sbjct: 284 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 344 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 403

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++   L + L + L
Sbjct: 404 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRTFL 462

Query: 473 EQDLGSS--GKKVITILRDSISLCKED 497
              LG++         LR  ++   + 
Sbjct: 463 ADRLGAAPLPDASRAALRRILARACDA 489


>gi|229020562|ref|ZP_04177304.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229026780|ref|ZP_04183112.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228734503|gb|EEL85165.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228740726|gb|EEL90982.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 379

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM + +     GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGTKIGAYGLTEPSSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F      +    N+     +  K+ +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEECRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|229158902|ref|ZP_04286959.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228624513|gb|EEK81283.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 379

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQAFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|229076555|ref|ZP_04209515.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|229118836|ref|ZP_04248185.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228664637|gb|EEL20130.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228706588|gb|EEL58801.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 379

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 147/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L       GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDHMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPSSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTL 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|239827224|ref|YP_002949848.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239807517|gb|ACS24582.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 380

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 142/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WDK  + P    + ++    GL    +   +        ++ I    +       
Sbjct: 26  PNAAKWDKEAYFPV--EVFKKMGELGLLGIPFPEEYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKQKWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A   +   G  ++  ++    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAEYARQVIVTAVTGKDERGKNIISAIIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  +Y LD   +S+
Sbjct: 191 TPGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPKKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|118480375|ref|YP_897526.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196045470|ref|ZP_03112701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|225867323|ref|YP_002752701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|229187567|ref|ZP_04314707.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|118419600|gb|ABK88019.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196023677|gb|EDX62353.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|225787815|gb|ACO28032.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|228595934|gb|EEK53614.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 379

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|228917950|ref|ZP_04081486.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228841747|gb|EEM86858.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 379

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 140/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +      + I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLTYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|229541648|ref|ZP_04430708.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326068|gb|EEN91743.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 552

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 120/480 (25%), Positives = 209/480 (43%), Gaps = 31/480 (6%)

Query: 34  MNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y  D  L  L+  +          KEL   GE       +          P+L  Y 
Sbjct: 1   MNFYHDDPNLARLLKQYLDPLFFDWAEKELAEFGEMCAGEIDERATHTDREGQPKLIKYN 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE   +V  +  +   + +  + G+   +  +    + +K  +    A+ YL++Q E 
Sbjct: 61  RYGEDVSRVWVNEGYFKTVEQVYNKGIVGYV-HKPIPALGQKGNYVYAFAQGYLLSQSEL 119

Query: 149 GHLMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     ++T+A   ++    +  + + + P++ S       +             LTE++
Sbjct: 120 GFYCPVTLTAAASYLLDHYGSHELKQTYLPQLISTGEAERYEGATF---------LTERQ 170

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVP 259
           GG+D+ A  ++     DG Y L G K+F S+  M    ++LA+ EG       +  FLVP
Sbjct: 171 GGSDVGANETKAV-SEDGCYRLYGEKYFASNVGMCGVAMVLARREGAPSGTKGLSLFLVP 229

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              E+G  NG+  +RLK+K+G R+  + E+ F     +L+GD       + +   L  + 
Sbjct: 230 WEKENGEKNGIYIRRLKDKLGVRAVPSGEVVFDGAKAYLVGDPRKGFYYMMEALNLSRIC 289

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+ S+  MR +  EA  YA RR   G  L D P++K  +  +A      T+  FRLA  
Sbjct: 290 NAVASIGIMRRAYREARAYALRRTAFGSRLADYPMVKETLVKMAAKQEVETSAVFRLATL 349

Query: 380 FDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           FD     K+  +E   AR++  I K    + A     EA+E  GG+GYIE+    R  R+
Sbjct: 350 FDRTASGKADEKENIMARLLIAILKMETAEQAIHFAHEAIEMHGGNGYIEDFVTPRLLRD 409

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +   ++  G+ N + L+VL L+ K   + +     + + +     +  T L   +   +E
Sbjct: 410 AQVLTVWEGTANILGLEVLRLMRK-FKVHDIFIGMMREKIDQL--QAGTWLSAGLEQLEE 466


>gi|168184488|ref|ZP_02619152.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Bf]
 gi|237796281|ref|YP_002863833.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Ba4 str. 657]
 gi|182672441|gb|EDT84402.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Bf]
 gi|229260783|gb|ACQ51816.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum Ba4 str. 657]
          Length = 635

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 147/369 (39%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLAKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A      G   +   + + S  G  +
Sbjct: 137 TETTAVLEGDH-YILNGEKIFITNAGEADIYVIFAVTTPNTGTRGISAFIVEKSFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+A  + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICHQQIISFKLADMATKLRAARLLVYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|126324967|ref|XP_001380314.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 669

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 128/544 (23%), Positives = 214/544 (39%), Gaps = 54/544 (9%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARM 76
            F   QP L    N Y  D+LL   +         +  +++L+  G  V S     L + 
Sbjct: 82  TFFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEANQDLQRFGARV-SGEILSLGQD 137

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
                P+L  +   G+R D +   PAW  L   S  +GL    ++R      R      +
Sbjct: 138 CEAMPPRLQQFDAWGKRVDLILTCPAWKKLKGISAEEGLIAIAYERKHSNWSR----VYQ 193

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA+L++ +          ++T  +   L     V K   P     E      +   K   
Sbjct: 194 AAKLFMFSSSSGMFTCPLAMTDGATKVL----EVMKSSGPP---GEAFSHLISRDPKLFW 246

Query: 197 AIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
             G  +TE++GG+D+A    +   K  DG Y L G KWF S+  +D  + LA++      
Sbjct: 247 TSGQWMTERKGGSDVAHGTETVACKQDDGTYKLYGFKWFTSATDADMTMALARIMDAQGS 306

Query: 253 --VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
              G   +         E G  NGL  QRLK K+G     T EL        L+      
Sbjct: 307 VTKGTQGLSLFFLKLRDEQGQLNGLEVQRLKEKLGTHQLPTAELLLDGAQAHLVSQEGRG 366

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  + +A + + 
Sbjct: 367 VATIANMLNVTRIYNSIGAVGSMRRMVFMARDYATQRFVFGKFIKDHPLHTQTLARMEVQ 426

Query: 366 IAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +     L   L       +   + ++++   R++A + K +  K A A+++E +EC GG 
Sbjct: 427 VRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVSEGLECFGGQ 486

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD------- 475
           GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   QD       
Sbjct: 487 GYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQDKVASASD 546

Query: 476 ----------LGSSGKKVITILRDSISLCKE-DKGLARFLTEKIALASSAAALYRAGMND 524
                     L  +  ++   L++ +       +  AR L   +A     A L       
Sbjct: 547 CSELASSVQCLQEALGRLALQLKNLLGQGSTSMEMAARDLAYTLARIYIGALLIEHA--A 604

Query: 525 IADV 528
            A+ 
Sbjct: 605 WAEA 608


>gi|217076822|ref|YP_002334538.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus
           TCF52B]
 gi|217036675|gb|ACJ75197.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus
           TCF52B]
          Length = 379

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 135/377 (35%), Gaps = 32/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
             + D+  + P     + +    G       R +        ++ I    +         
Sbjct: 28  AAKVDEEGYFPI--ENVEKLRKYGFLGMNIPREYGGAGADDLSYVIAVEEISRYCATTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +   + + E                   LTE   G+
Sbjct: 86  ILSAHNSLACWPIYYYGTDYQKEKFLKPLATGE-------------KLGAFALTEPNAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D +  ++   K  +         +  +  ++D +I+ A     +G   +   + +    G
Sbjct: 133 DASNQSTYAVKDGNNWIINGTKIFITNGGVADIYIIFASTNKELGAKGISAFIVERDTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               +++ K+G R +AT EL   N    ++   N+     +  KI +  LD   + ++  
Sbjct: 193 FSIGKIEEKMGIRGSATAELILDNV---VVPGENLLGKEGQGFKIALKTLDGGRIGIAAQ 249

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +A     E + Y ++R   G  +     ++  IA++   I AA  L +  A    ++
Sbjct: 250 ALGIAQGAFDETVKYIKQREQFGRPIAKFQSVQFMIAEMKTKIEAARCLVYNAALKKMKS 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S EAA A       KY+   +A  V   A++  GG GY +E  + R  R++    I 
Sbjct: 310 SDYSLEAAMA-------KYYASDVAMEVTRMAVQLHGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + + K
Sbjct: 363 EGTTEVQKIVISSNILK 379


>gi|196041019|ref|ZP_03108316.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196028187|gb|EDX66797.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 379

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTTG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|172061116|ref|YP_001808768.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171993633|gb|ACB64552.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 584

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 142/514 (27%), Positives = 235/514 (45%), Gaps = 37/514 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVL 66
           MN   +  D+  + N  P   G+N +++D  L AL+              +L  LG  V 
Sbjct: 1   MNDTARTPDAGASDNI-PDSRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPD-- 116

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
                 A  ++ A  +L  Q E G     S+T +    L     P + + + P + SR++
Sbjct: 117 ----AVAPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDF 172

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++         + ++ L G KWF S+  
Sbjct: 173 D---------TLFQGAMFMTEQAAGSDVGRIATRAVHETHASGEAVWRLYGDKWFCSNAD 223

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 224 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEG 283

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L E++H A RR   G  LI+ P
Sbjct: 284 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAARRTAFGRTLIEMP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 344 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 403

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG GYIEE S AR  R++   SI  G+ N + LDV    ++   L + L + L
Sbjct: 404 GDAMEVRGGIGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRTFL 462

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              LG++     +       L +    LAR   E
Sbjct: 463 GDRLGAAPLPDASRAALRRILARACDALARVAAE 496


>gi|229094455|ref|ZP_04225526.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|301056809|ref|YP_003795020.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|228688937|gb|EEL42765.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|300378978|gb|ADK07882.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 379

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|322807153|emb|CBZ04727.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 635

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 146/369 (39%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLAKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A      G   +   + + S  G  +
Sbjct: 137 TETTAVLEGDH-YILNGEKIFITNAGEADIYVIFAVTTPNTGTRGISAFIVEKSFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+   + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICHQQIISFKLADMVTKLRAARLLVYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|115352248|ref|YP_774087.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115282236|gb|ABI87753.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 584

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 141/510 (27%), Positives = 236/510 (46%), Gaps = 37/510 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVL 66
           MN   +  D+  + N  P   G+N +++D  L AL+              +L  LG  V 
Sbjct: 1   MNDTARTPDAGASGNI-PDSRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 59  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLAALSHQPD-- 116

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
                 A  ++ A  +L  Q E G     S+T +    L     P + + + P++ SR++
Sbjct: 117 ----AVAPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPRLASRDF 172

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++  +      + ++ L G KWF S+  
Sbjct: 173 D---------TLFQGAMFMTEQAAGSDVGRIATRAVRDTHTSGEAVWRLYGDKWFCSNAD 223

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 224 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYGIVRLKDKLGSRSMASGEIALEG 283

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L E++H A  R   G  LI+ P
Sbjct: 284 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    EA +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 344 LMQRQLMKMLLPAEAARAMFMQIALLLPEADAGDEQAARCVRILTPLIKFRACRDARRVT 403

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++   L + L + L
Sbjct: 404 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRTFL 462

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLAR 502
              LG++     +       L +    LAR
Sbjct: 463 GDRLGAAALPDASRAALRRILARACDALAR 492


>gi|297585455|ref|YP_003701235.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297143912|gb|ADI00670.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 380

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 128/357 (35%), Gaps = 30/357 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL    W   +  +     ++ I    L  +       L +    +   +       
Sbjct: 46  AELGLTGIPWPEEYGGIGADYVSYVIAVEELSRVCASTGVTLSAHISLAGWPIYTFGNED 105

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + +   +    Y                 GLTE   G+D A + +  ++  D      
Sbjct: 106 QKQKYLRGLAEGTY-------------LGAYGLTEPGAGSDAAGMKTTAKRDGDDYILDG 152

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              +  +   +D +++ A  +       V   + +    G    + + K+G RS+ T+E+
Sbjct: 153 SKIYITNGGEADIYVVFALTDPEKKHKGVTAFIVEKGMEGFTMGKKERKMGIRSSPTLEI 212

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
            F           N      E  KI ++ LD     ++   V +A     EA+ YA+ R 
Sbjct: 213 IFDGVRVP---KENRLGEEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDEAVAYAKERK 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +  Q  +   +AD+A  + A+  L+++ A    E KS  + +A        +K +
Sbjct: 270 QFGKPIGAQQGIGFKLADMATKVEASRLLTYQAAWLESEGKSYGKASAM-------SKLF 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               A  V  EA++  GG GY ++  + R+ R++    I  G+     L +  +L  
Sbjct: 323 AGDSAMEVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTNEIQRLVISKMLMN 379


>gi|311069015|ref|YP_003973938.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310869532|gb|ADP33007.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 377

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 138/364 (37%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L+R+    GL       +F        ++ +    +  ++      L   +    + + 
Sbjct: 38  QLIRKMGEYGLMGVPVPETFGGAGADITSYILTIHEISKVSAAIGVILSVHTSVGTNPIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S EY                  LTE   G+D  +I +   K  +
Sbjct: 98  YFGTEEQKRKYIPKLASGEY-------------LGAFALTEPYSGSDAGSIRTTAVKK-N 143

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F+++  + D ++  A  E   G   +   + +    G    + + K+G  
Sbjct: 144 GKYVLNGSKMFITNGGAADTYVTFALTEPGKGTRGISAFIVEKDTPGFIIGKKERKMGLH 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----I 336
            + T EL F N     +   N+     E  KI L  LD   + ++   + +AEA     +
Sbjct: 204 GSNTTELIFDNA---EIPAENLLGQEGEGFKIALANLDVGRIGIAAQGLGIAEAALDYSV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+++R   G  +     +   +AD+A    A+  L +  A+  +      +EA+ A+  
Sbjct: 261 QYSKQRVQFGRPIASNQAISFKLADMATRAEASKHLVYHAADLHNRGLKCGKEASMAKQ- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +    A     +A++  GG GY ++  + R +R++    I  G+       +  
Sbjct: 320 ------FATDTAMKAAIDAVQIYGGYGYTKDYPVERLFRDAKVTQIYEGTNEIQRQIISK 373

Query: 457 LLEK 460
            + +
Sbjct: 374 YILQ 377


>gi|19704756|ref|NP_604318.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328472|ref|ZP_06870992.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19715082|gb|AAL95617.1| ACYL-COA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154378|gb|EFG95176.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 636

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKKKYL-------------TPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKLRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDAVQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|20807046|ref|NP_622217.1| Acyl-CoA dehydrogenase [Thermoanaerobacter tengcongensis MB4]
 gi|20515533|gb|AAM23821.1| Acyl-CoA dehydrogenases [Thermoanaerobacter tengcongensis MB4]
          Length = 380

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 137/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     +++  +  +    + + +          I        A    
Sbjct: 26  PRAKEIDRTGEFP--WDNVKKMANADMMGIPYPKEYGGAGGDYISYIITVEEISRACAAT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   + A   +    T    + +               P+ +        LTE   
Sbjct: 84  GVILSAHTSLACFPIFQWGTKEQKEKYL-------------VPLARGEKLGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD A I +      D         +  +  ++D +I+ A+ +   G   +   + +   
Sbjct: 131 GTDAAGIQTTATLEGDHYVLNGCKIFITNGGVADVYIVFAKTDKSQGAKGISAFIVEKGF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    +++ K+G R +   EL F +         N+     E  KI ++ LD   + + 
Sbjct: 191 PGFSIGKIEEKMGIRGSRAAELVFEDCIVP---KENLLGKEGEGFKIAMVTLDGGRIGIG 247

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+A     I Y + R   G  +     ++  IA++A  ++AA  L +  A   +
Sbjct: 248 AQALGIAQAALDEVIKYVKERQQFGRPIGKFQGLQWYIAEMATKVSAARHLVYYAAWRKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S S EAA A       K +  + A  V  +A++  GG GY ++  + R  R++    
Sbjct: 308 NNLSYSMEAAMA-------KLFASETAMEVTTKAVQIFGGYGYTKDYPVERLMRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + + + + K
Sbjct: 361 IYEGTSEVQKMVIASNILK 379


>gi|49480422|ref|YP_039334.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|49331978|gb|AAT62624.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 379

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQTFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++  D         +  +  ++D +++ A  +           + +    G
Sbjct: 133 DAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E 
Sbjct: 250 AVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTQEIQRLVISRMLTK 379


>gi|319796278|ref|YP_004157918.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598741|gb|ADU39807.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 573

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 142/538 (26%), Positives = 232/538 (43%), Gaps = 28/538 (5%)

Query: 12  MNQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYV 65
           M +   P+    A   P P   G N +++D+ L  L+A +      + +    E LG   
Sbjct: 1   MPENAAPAALPTAHAHPIPDRHGQNLFTADTALHDLLALYLPDDLRAHMQPHFERLGGLA 60

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSF 124
                 ELA  A+ N P L      G    KV  HPA+  + R ++ + GL         
Sbjct: 61  GG-QLDELAGTADRNPPTLKQRTRTGLDEQKVVKHPAYVEMERLALREFGLAAISHRDET 119

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSRE 182
                K    ++    YL  Q E G     S+T +    L     P +   + P++ S +
Sbjct: 120 LGWKGKMPPLVKYVLTYLFVQAEFGLCCPVSMTDSLTRTLKKFGDPELVARFLPRLTSLD 179

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +D   +  M          +TE+  G+DIAA  +  ++ +DG + ++G KWF S+P +D 
Sbjct: 180 FDELAQGAMF---------MTEQAAGSDIAATATMARREADGSWRITGDKWFCSNPDADF 230

Query: 243 FIMLAQV-EGRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            ++LA+  +G  G   V   L     EDGS N     RLK+K+G RS A+ E+       
Sbjct: 231 AMVLARAEDGAAGMKGVSLFLLPRQLEDGSLNHYRIIRLKDKLGTRSMASGEIRLEGAVA 290

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           +L+G+       + DM     L + + +   MR ++AEA + A  R   G  L   P+M+
Sbjct: 291 YLVGEEGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQ 350

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEA 415
           R +  + L    A  +  + A +   + +   +A A  RI+ P+ K+  C+ A  V  +A
Sbjct: 351 RQLDKLRLPAEQARTMVCQTALALARSDAGEPDAYALLRILTPLIKFRACRDARKVTGDA 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ME  GG GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L   L +  E+ 
Sbjct: 411 MEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAVKREGSLP-VLRAHCEKL 469

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTE-KIALASSAAALYRAGMNDIADVFLEN 532
           LG +            +L +          E    LA  AA+      + IA  +  +
Sbjct: 470 LGDAALAPAFAKALRDALARAAALAETAAREGGDVLARQAASALYHCTSSIAMAWEAS 527


>gi|262066901|ref|ZP_06026513.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291379370|gb|EFE86888.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 637

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  + +    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIEKFGKMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKKKYL-------------TPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     E  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKLRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|188588929|ref|YP_001920742.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43]
 gi|188499210|gb|ACD52346.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43]
          Length = 636

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 146/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     + +    G+  + + + +            A           G ++S 
Sbjct: 32  DKESKFPT--EAIEKLAKMGVLGTPYPKKYGGAGLDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  +  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGTYPIFAYGTEEQKKKYMI-------------PLAKGEKIGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLDGD-YYILNGGKIFITNADKADTYVVFAVTTPDIGVRGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS++T EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTAELIFNNVKVP---KENLLGEEGQGFKISMQTLDGGRIGIASQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q V+   +AD+A  I AA  L +  A   +  +S 
Sbjct: 253 IAQGAYENALEYSKERVQFGKPICQQQVISFKLADMATKIRAARLLVYSAAELKENHESY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDICLEVVNDALQIFGGNGYLKGMDVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + +
Sbjct: 366 NEIQRMVIASHI 377


>gi|304440341|ref|ZP_07400230.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371093|gb|EFM24710.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 752

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 147/369 (39%), Gaps = 35/369 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSV 156
           EF      ++      G     +++ +        ++ I    L  +       L + + 
Sbjct: 143 EFPDEIVKMMG---EHGWMGLPYEKKYGGAGLDAISYAIAVEELSRVDGGVGVILSAHTS 199

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  +    T    + +               P+ K       GLTE   G+D     +
Sbjct: 200 LGSYPIEAFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPEAGSDAGGTET 246

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             +   D  Y L+G+K F+++ P +D +++ A     +G   +   + +    G  +   
Sbjct: 247 VAELDGD-YYILNGNKIFITNAPKADYYVVFAVTTPGIGTHGISAFIVEKGWEGFTFGDH 305

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE 334
            +K+G RS++T EL+F+N         N+     +  +I +  LD   + ++   + +A+
Sbjct: 306 YDKLGIRSSSTAELQFNNVKVP---KENLLGQEGQGFRIAMQTLDGGRIGIAAQALGIAQ 362

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A      ++   E
Sbjct: 363 GAYEAALKYAKERIQFGRPIAQQQAISFKLADMATKLRCARFLIYSAAEMKTNHENYGME 422

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           +A A++       +   +A  V+ +A++  GG+GY++   + R YR++   +I  G+   
Sbjct: 423 SAMAKM-------YASDIALEVVNDALQIHGGNGYLKGMDVERMYRDAKITTIYEGTNEI 475

Query: 450 MVLDVLNLL 458
             + + + +
Sbjct: 476 QRVVIASHI 484


>gi|312110767|ref|YP_003989083.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311215868|gb|ADP74472.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 380

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P    + ++    GL    +   +        ++ I    +       
Sbjct: 26  PYAAKWDEEAHFP--FEVFKKMGKLGLLGIPFPEKYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKQKWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  S   I+ A   +   G  ++  ++    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAQYSRQVIVTAVTGKDERGKNIISAIIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  ++ LD   +S+
Sbjct: 191 APGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPKKGFKQFLHTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|146338027|ref|YP_001203075.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146190833|emb|CAL74838.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 594

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 142/544 (26%), Positives = 231/544 (42%), Gaps = 29/544 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFPSVVH----KELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N Y +D  L  L+  + P  +       L+ LGE        E AR+A+ + P
Sbjct: 21  APDTTGLNFYRADPALSDLLRIHLPDALFRHLVPHLDRLGELAGGY-LDECARLADRHGP 79

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     +E+HPA+  L R +  + G+H     +       K     + A  +
Sbjct: 80  VLHQRDRFGRDAQWIEYHPAYRELERAAFGEFGIHAMSIRKGILGWPAKYPVAAKHAFTF 139

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     +VT   A ++A   +  +   +   +   +     +          G
Sbjct: 140 LFNQAEFGLGCPINVTDGCAKLLASFGSHALKAKYLDGLTQTDMRKLTQG---------G 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +T+      D  + L G KWF S+  +   ++LA+ EG       V
Sbjct: 191 QFMTEKEGGSDVGTLTTVAVPEGDH-WRLHGEKWFCSNADAKVVMLLARPEGAEPGTRGV 249

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+PR L+DG+ N     RLK+K+G RS A+ E+       + +G L+     + +M 
Sbjct: 250 GLFLMPRFLDDGTQNHYRIVRLKDKLGTRSMASGEIRLEGAIAYAVGRLDRGFVQMAEMV 309

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +AI  AR R V G  ++D P+ +R +  I L    A ++S
Sbjct: 310 NSSRLSNGVKSTALMRRAWHDAITVARNRVVFGQRIVDLPLGRRQLMKILLPTEQALSMS 369

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A++ S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE   AR
Sbjct: 370 FLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEEFVTAR 429

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++   SI  G+GN + LD L            L + L   L  S             
Sbjct: 430 LLRDAHLGSIWEGTGNIVALDALKRAVGRHGAESALAADLHARLDDSAAVPQAWRDQLHR 489

Query: 493 LCKEDKGLARFLTEKIALASS---AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           L     G AR +  +    +    A +L     + ++  +   R          +L  + 
Sbjct: 490 LVDRAVGFAREVAGRADNEAESRRATSLLYHTASVVSLTWESARIYATRGDARRLLLAKL 549

Query: 550 NAAH 553
              H
Sbjct: 550 VVDH 553


>gi|27383010|ref|NP_774539.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27356183|dbj|BAC53164.1| bll7899 [Bradyrhizobium japonicum USDA 110]
          Length = 594

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 146/540 (27%), Positives = 239/540 (44%), Gaps = 29/540 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFPS----VVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   GMN Y +D  L  L+  + P      +   L+ LGE     T  E AR+A+ +TP
Sbjct: 21  APDTSGMNFYRADQALTDLLRIHLPETLFRHIEPHLDRLGELAGG-TLDECARLADRHTP 79

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     +E+HPA+  L + +  + G+H     +       K     + A  +
Sbjct: 80  VLHQRDKFGRDVQWIEYHPAYRELEKAAFGEFGIHALSIRKGIMGWPDKYPVVAKHAFTF 139

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     +VT   A ++A   +  +   +   +   +     +          G
Sbjct: 140 LFNQTEFGMGCPINVTDGCAKLLANFGSEALKAKYLDGLTQTDMTKLTQG---------G 190

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +T++  +  D  + L G KWF S+  +   ++LA+ EG       V
Sbjct: 191 QFMTEKEGGSDVGTLTTRAVQEGDH-WRLYGEKWFCSNADAKVVMLLARPEGAGPGTRGV 249

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+ R L+DGS N     RLK+K+G RS A+ E++      + +G L+     + +M 
Sbjct: 250 GLFLMLRFLDDGSQNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQMAEMV 309

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +A+  A+ R V G  +ID P+ +R +  I L +  A ++S
Sbjct: 310 NSSRLSNGVKSTALMRRAYHDAMTVAKNRVVFGSRIIDLPLGRRQMLKIMLPVEQALSMS 369

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A++ S++ AA  RI+ P  K+   + A  V  +A+E  GG GYIEE + AR
Sbjct: 370 FLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYIEEFATAR 429

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++   S+  G+GN + +D L            L + L   L  S            +
Sbjct: 430 LLRDAHLGSVWEGTGNIVAIDALRRAVGRHGAESALAADLHARLDDSASVPQAWRDRLHT 489

Query: 493 LCKEDKGLARFL---TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           L     G AR +    E  A A  A +L     + +A  +  +R          +L  R 
Sbjct: 490 LTDRAVGFAREVAGKAENEADARRATSLLYHVASAVALAWEAHRIHAMRGDARRLLLSRL 549


>gi|229494748|ref|ZP_04388506.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229318415|gb|EEN84278.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 571

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 137/443 (30%), Positives = 213/443 (48%), Gaps = 27/443 (6%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   +E     L+ LG         ELA +A+ N P L  + 
Sbjct: 1   MNFAHTDPALTAVVDRWTAGADRETLNGLLDRLGRDAAGR-LSELADIADKNPPVLQQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
             G+R D++ +HPA+  L R + ++ GL      +             +    Y+  Q E
Sbjct: 60  KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHGWDSVHPPLAKYLASYIFVQAE 119

Query: 148 AGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T  +A  + +   P V   W   + S +          + +    + +TE 
Sbjct: 120 FGLACPVSMTDAAARTLRMFGDPAVFSPWIDALTSTD---------PEQAKTGAMFMTEI 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLV 258
           + GTDIA   ++ ++  DG + L+G KWF S+P +D  I LA+  G        VG F+V
Sbjct: 171 QAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGSTRGVGMFMV 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P+ L  G  N L   RLK+K+G RS  + E+  +      +G+L+     + +M     L
Sbjct: 230 PKTLGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMAEMVNTSRL 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A+ S + MR ++ EA+ +++ R V G  L DQP+M+  +  +ALD  A+ AL    A 
Sbjct: 290 SNAMRSSALMRRAVREAVEHSKSRVVFGKRLFDQPLMRATLLPLALDAEASLALVAYSAQ 349

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               A    E+A A  R++ PI K++ CK A  V  EAME  GG+GYIEE   AR  R++
Sbjct: 350 CLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWVNARLVRDA 409

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
              SI  GS N + LDVL  L K
Sbjct: 410 HLGSIWEGSSNVIALDVLRCLRK 432


>gi|306821130|ref|ZP_07454746.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550823|gb|EFM38798.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 646

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 140/354 (39%), Gaps = 30/354 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           H G+    + + +        ++ I    L  +       L + +   A  ++   T   
Sbjct: 49  HLGIMGIPYGKEYGGAGLDVISYAIAVEELSRVDGGVGVILSAHTSLGAYPISAFGTEEQ 108

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K +               P+ K       GLTE   G+D     +  +   D      G
Sbjct: 109 KKKYL-------------VPLAKGEKIGAFGLTEPEAGSDAGGTQTTAELDGDYYILNGG 155

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  ++  +D +++ A     +G   +   + +   +G  +    +K+G RS+ T EL 
Sbjct: 156 KIFITNAGKADIYVVFAVTTPGIGTKGISAFIVEKGWDGFSFSDHYDKLGIRSSQTCELI 215

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           F N         N+     +  +I +  LD   + ++   + +A+     A++YA++R  
Sbjct: 216 FDNVKVP---KENLLGKEGQGFRIAMQTLDGGRIGIASQALGIAQGAYESALNYAKQRVQ 272

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  Q  ++   AD+A  + AA  L +  A+  +  +  S EAA A+        + 
Sbjct: 273 FGKPIAFQQAIEFKFADMATKLRAARLLIYSAADLKEAHEDYSMEAAMAKK-------YA 325

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A  V  +A++  GGSGY++   + R YR++   +I  G+   M + + + +
Sbjct: 326 SDIALEVCNDALQIYGGSGYMKGMDVERFYRDAKITTIYEGTNEIMRVVIASHI 379


>gi|327441462|dbj|BAK17827.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 144/400 (36%), Gaps = 38/400 (9%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +E+ R    N   P         E +D+  F         +    GL    W   + 
Sbjct: 10  QQLREMIRDFAINEVAPTAEHRDEH-EEFDRGIF--------DKMAELGLTGIPWPEEYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A+ I    L  +       L + +  +   +         + +          
Sbjct: 61  GAGFDYLAYCIAVEELSRVCASTGVTLSAHTSLAGWPIFKFGNEEQKQKYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                PM +       GLTE   G+D   + +   K  D  Y L+G K F+++  ++D +
Sbjct: 112 ----RPMAEGKKIGAYGLTEPGSGSDAGGMKTYAVKDGDD-YILNGSKIFITNGGVADIY 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A  +           + +    G    + + K+G RS+ T E+ F N        L 
Sbjct: 167 VVFAVTDPEA-KNGTTAFIVEADYPGFSVGKKEKKLGIRSSPTTEIIFDNCRVPKENVLG 225

Query: 304 V-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G +  MK L       A  +V   + +L  A+ YA+ R   G  +     +   +A
Sbjct: 226 EEGQGFIIAMKTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGISFKLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I A+  L+++ A          + +A A+++A          A  V  EA++  G
Sbjct: 286 DMATEIEASRLLTYQAAWLESNDLPYGKASAMAKLLAG-------DTAMKVTTEAVQVFG 338

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY ++  + R+ R++    I  G+     L +  ++ K
Sbjct: 339 GYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMITK 378


>gi|256544587|ref|ZP_05471959.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
 gi|256399476|gb|EEU13081.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
          Length = 400

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  ++ D+    P     + +    G     +D  F         + +    L       
Sbjct: 47  PLAQKVDEEHMFPE--ETVAKMQELGFFGIPFDEEFGGQGADTLTYVLAVEELSKYCAST 104

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +  SA  +         K +   + S E                  GLTE   
Sbjct: 105 GVILSAHTSLSADCINKFGNDEQKKKYLTPLASGE-------------KLGAFGLTEPNA 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +  +   D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 152 GTDASGQQTTAKLDGDE-YVLNGTKIFITNGGYADIYVVFAMTDKSKGNHGISAFIVEKG 210

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +  L+NK+G   ++T+EL F +     +   N+     +  KI +  LD   + +
Sbjct: 211 TKGFDFGTLENKMGINGSSTMELIFQDCR---IPKENLLGEEGKGFKIAMATLDGGRIGI 267

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  L      +  +A++A++I AA  L ++ A+  
Sbjct: 268 AAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARNLVYKAASLK 327

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++ S  AA A++ A  T  +       V   A++ +GG GYI+E  + R  R++   
Sbjct: 328 DAGENYSVAAAMAKLKASRTASF-------VADRAVQILGGYGYIKEYDVERMMRDAKIT 380

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+   M++ V   L +
Sbjct: 381 EIYEGTSEVMLMVVSGALLR 400


>gi|56420132|ref|YP_147450.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56379974|dbj|BAD75882.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 380

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P    + R+    GL    +   +        ++ I    +       
Sbjct: 26  PYAAKWDEEAHFPL--DVFRKMGELGLLGLPFPEEYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKQKWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A   +   G  ++  L+    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAQYARQVIVTAVTGKDARGKNIITALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  +Y LD   +S+
Sbjct: 191 SPGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPQKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|313108949|ref|ZP_07794925.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310881427|gb|EFQ40021.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 575

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 146/540 (27%), Positives = 229/540 (42%), Gaps = 39/540 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL R +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LVPRTRRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREQG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++   SI  G+ N + LDV   + +   L             S        L D + L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQALEPLRRHLRRLLDDSDLPGDARDLFDEL-LV 478

Query: 495 KEDKGLA----RFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHGRF 549
           +    +A    R   E++  A SA          I   +  +R   D        L  R 
Sbjct: 479 RVVATMADVAERRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVARH 535


>gi|254247749|ref|ZP_04941070.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124872525|gb|EAY64241.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 583

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 142/514 (27%), Positives = 235/514 (45%), Gaps = 38/514 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVL 66
           MN   +  D+  +    P   G+N ++ D  L AL+       H       L  LG  V 
Sbjct: 1   MNDTARTPDTGAS--NIPDTRGINFFTVDPDLGALLKLHLGDAHYAELEPRLHALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHSAETV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + P++ SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++    +D     ++ L+G KWF S+  
Sbjct: 172 D---------TLYQGAMFMTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++  +  + L + L
Sbjct: 403 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQRE-HALDALRTFL 461

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              LG++     +       L +    LAR   E
Sbjct: 462 GDRLGAAPLPEASRTALRRILVRACDALARVAGE 495


>gi|229087834|ref|ZP_04219948.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228695470|gb|EEL48341.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 379

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 146/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---AELGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPLFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +I+ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYIVFALTDPESKQRGTSAFIVESDAP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +         N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPA---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A ++ A+  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATNVEASRLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|229105933|ref|ZP_04236557.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228677507|gb|EEL31760.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 379

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 146/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L       GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RELFDHMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPSSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A              + +    
Sbjct: 133 DAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFALTNPESKQRGTSAFIVESDTL 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|107028660|ref|YP_625755.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116690181|ref|YP_835804.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105897824|gb|ABF80782.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116648270|gb|ABK08911.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 583

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 142/514 (27%), Positives = 235/514 (45%), Gaps = 38/514 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVL 66
           MN   +  D+  +    P   G+N ++ D  L AL+       H       L  LG  V 
Sbjct: 1   MNDTARTPDTGAS--NIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + P++ SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVARYLPRLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++    +D     ++ L+G KWF S+  
Sbjct: 172 D---------TLYQGAMFMTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++  +  + L + L
Sbjct: 403 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQRE-HALDALRTFL 461

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              LG++     +       L +    LAR   E
Sbjct: 462 GDRLGAAPLPEASRTALRRILVRACDALARVAGE 495


>gi|153941172|ref|YP_001392122.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. Langeland]
 gi|170754517|ref|YP_001782454.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum B1 str. Okra]
 gi|152937068|gb|ABS42566.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. Langeland]
 gi|169119729|gb|ACA43565.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum B1 str. Okra]
 gi|295320127|gb|ADG00505.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum F str. 230613]
          Length = 635

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 147/369 (39%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLAKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A     +G   +   + + +  G  +
Sbjct: 137 TETTAVLEGDH-YILNGEKIFITNAGEADIYVVFAVTTPNIGTRGISAFIVEKTFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL  ++         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELILNDVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+A  + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICHQQIISFKLADMATKLRAARLLIYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|294501894|ref|YP_003565594.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351831|gb|ADE72160.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 377

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 142/378 (37%), Gaps = 37/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            +R ++  F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AQRDEEERFDRGIFTQM---ADLGLTGIPWPEQYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM         GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIYTFGTEEQKQKYLK-------------PMATGEKIGAYGLTEPSAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +   K  +  Y L+G K F+++   +D +++ A+++           + +    
Sbjct: 133 DAGGMRTLAVKDGED-YILNGSKIFITNGGEADIYVVFARIDPN--EKRTSAFIIEKDMP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F +         N+     E  K+ ++ LD     ++ 
Sbjct: 190 GFSVGKKEKKLGIRSSPTTEIIFEDCRVP---KENLLGNEGEGFKVAMMTLDGGRNGIAA 246

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  +I Q  +   +AD+A  I AA  L+++ A    +
Sbjct: 247 QAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFKLADMATSIEAARLLTYQAAWLESQ 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I
Sbjct: 307 GLPYGKESAM-------SKLYAGDTAMKVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 359

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L K
Sbjct: 360 YEGTQEIQRLVISRYLAK 377


>gi|116051591|ref|YP_789571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115586812|gb|ABJ12827.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 575

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL R +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREEG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|320538446|ref|ZP_08038313.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421]
 gi|320144708|gb|EFW36457.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421]
          Length = 381

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 140/378 (37%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  P+    +++    G+      + +            A      A    
Sbjct: 26  PLAEEIDEEERFPS--ETVKKMAEIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACGST 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVVVSAHTSLGTWPILKFGTDAQKEKYLPKLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + L+G K F+++   ++ +I+ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAVLDEATNEWVLNGSKIFITNAGYANVYIIFAMTDKSKGVKGISAFIVES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    + + K+G + +AT EL F N       LLGD+N              +  A 
Sbjct: 191 TTPGFSVGKKEKKLGIKGSATCELIFENARIPKDNLLGDVNKGFKIAMMTLDGGRIGIAS 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  +      +  +A++ + + AA  L ++ A +   
Sbjct: 251 QALGLAQGALDETVKYVKERKQFGRPISAFQNTQFQLANLEVKVEAARLLVYKAAWAESN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 311 GLPYSVDAARA-------KLFAAETAMEVTTKAVQFFGGYGYTREYPVERMMRDAKITEI 363

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 364 YEGTSEVQRMVIAGNLLK 381


>gi|71896191|ref|NP_001025577.1| MGC107841 protein [Xenopus (Silurana) tropicalis]
 gi|60551258|gb|AAH91017.1| MGC107841 protein [Xenopus (Silurana) tropicalis]
          Length = 587

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 126/556 (22%), Positives = 227/556 (40%), Gaps = 58/556 (10%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
              Q P     N +  D+LL + +  + P  V  E+        + ++      L R   
Sbjct: 11  FFQQMPSLG--NQFLEDALLQSYLKRHLPPQVLSEMSQDCKRFAQRLV-EEIDSLGRDCE 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R     I+  
Sbjct: 68  LNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSR----LIQVV 123

Query: 139 RLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           +LYL +            +  +A ++  +  P   +D    + SR  +P+N         
Sbjct: 124 KLYLYSPSAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSNF-------W 174

Query: 197 AIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------ 249
             G  +TE+RGG+D+A  T +   +  DG Y L G+KWF S+  S+  + L +V      
Sbjct: 175 TSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGRVVDNHGN 234

Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +  F +     +G+ NG+  QRLK K+G R   T EL         +      
Sbjct: 235 TVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALKISPEGRG 294

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  M  +  + + I +V+GMR  +  A  YA +R V G ++ D P+  + +A + ++
Sbjct: 295 VASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQTMARMEVE 354

Query: 366 IAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              A  +   ++      +   +  ++    R++ P+TK +  K A +VI+E +EC GG 
Sbjct: 355 ARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEGLECFGGQ 414

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLGS--- 478
           GY+E+  +    R++   +I  G+ N + LDVL  + K    +   LFS  ++ L +   
Sbjct: 415 GYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQEKLDAASC 474

Query: 479 ------SGKKVITILRDSISLCKED--------KGLARFLTEKIALASSAAALYRAGMND 524
                 + K  +  L   ++  ++         +  AR     +A       L       
Sbjct: 475 VPSLSQAAKHTLRALNKLMAFTQQAGQRGGNYMELAARDFAYSLAKIYIGTLLLDHAAWK 534

Query: 525 IA---DVFLENRFLDN 537
            A   D++   R+ D 
Sbjct: 535 GASATDIYCAQRWSDQ 550


>gi|229542456|ref|ZP_04431516.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326876|gb|EEN92551.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 380

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 134/377 (35%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
            ER +   F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDENERFDRGIFDQM---AALGLTGIPWPEQYGGIGSDFLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  ++  +    T    + +               P+ +       GLTE   G+
Sbjct: 86  TLSAHTSLASWPLFKFGTEEQKQKYL-------------VPLARGEKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A+ +  ++  D         +  +  ++D +I+ A  + +         + +    G
Sbjct: 133 DAGAMVTTARREGDHYVLNGSKIFITNGGVADIYIVFALTDPKSKHHGTSAFIIEKDFPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G R++ T E+ F N         N      +  KI ++ LD     ++  
Sbjct: 193 FSTGKKEKKMGIRASTTTEIIFDNVIVPA---ENRLGEEGQGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  YA+ R   G  +     +   +AD+A  + AA  L+++ A      
Sbjct: 250 AVGIAQGALDAATAYAKERKQFGKPIAANQGVSFKLADMATAVEAARLLTYQAAWLESNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I 
Sbjct: 310 LPYGKESAM-------SKLFAGDTAMKVTTEAVQIFGGYGYTKDYPVERFMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L +
Sbjct: 363 EGTQEIQRLVISRMLTR 379


>gi|89272879|emb|CAJ82159.1| novel acyl-CoA-dehydrogenase protein [Xenopus (Silurana)
           tropicalis]
          Length = 587

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 126/556 (22%), Positives = 227/556 (40%), Gaps = 58/556 (10%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
              Q P     N +  D+LL + +  + P  V  E+        + ++      L R   
Sbjct: 11  FFQQMPSLG--NQFLEDALLQSYLKRHLPPQVLSEMSQDCKRFAQRLV-EEIDSLGRDCE 67

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R     I+  
Sbjct: 68  LNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSR----LIQVV 123

Query: 139 RLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           +LYL +            +  +A ++  +  P   +D    + SR  +P+N         
Sbjct: 124 KLYLYSPSAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSNF-------W 174

Query: 197 AIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------ 249
             G  +TE+RGG+D+A  T +   +  DG Y L G+KWF S+  S+  + L +V      
Sbjct: 175 TSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGRVVDNHGN 234

Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +  F +     +G+ NG+  QRLK K+G R   T EL         +      
Sbjct: 235 TVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALKISPEGRG 294

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +  M  +  + + I +V+GMR  +  A  YA +R V G ++ D P+  + +A + ++
Sbjct: 295 VASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQTMARMEVE 354

Query: 366 IAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              A  +   ++      +   +  ++    R++ P+TK +  K A +VI+E +EC GG 
Sbjct: 355 ARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEGLECFGGQ 414

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLGS--- 478
           GY+E+  +    R++   +I  G+ N + LDVL  + K    +   LFS  ++ L +   
Sbjct: 415 GYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQEKLDAASC 474

Query: 479 ------SGKKVITILRDSISLCKED--------KGLARFLTEKIALASSAAALYRAGMND 524
                 + K  +  L   ++  ++         +  AR     +A       L       
Sbjct: 475 VPSLSQAAKHTLRALNKLMAFTQQAGQRGGNYMELAARDFAYSLAKIYIGTLLLDHAAWK 534

Query: 525 IA---DVFLENRFLDN 537
            A   D++   R+ D 
Sbjct: 535 GASATDIYCAQRWSDQ 550


>gi|254304392|ref|ZP_04971750.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324584|gb|EDK89834.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 636

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  +++    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIKKFGQMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIYAFGTEEQKKKYLI-------------PLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGDH-YILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADMATKLRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|138895108|ref|YP_001125561.1| butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196248310|ref|ZP_03147011.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|134266621|gb|ABO66816.1| Butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196212035|gb|EDY06793.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 380

 Score =  309 bits (792), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 143/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+  + P    + R+    GL    +  S+        ++ I    +       
Sbjct: 26  PYAAKWDEEAYFP--REVFRKMGELGLLGLPFPESYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    +    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGSEEQKQTWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A   +   G  ++  L+    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAQYARQVIVTAVTGKDARGKNIITALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  +Y LD   +S+
Sbjct: 191 SPGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPQKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|107103107|ref|ZP_01367025.1| hypothetical protein PaerPA_01004176 [Pseudomonas aeruginosa PACS2]
 gi|254236509|ref|ZP_04929832.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719]
 gi|126168440|gb|EAZ53951.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719]
          Length = 575

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL R +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREQG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|251779239|ref|ZP_04822159.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083554|gb|EES49444.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 636

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 143/360 (39%), Gaps = 32/360 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALM 165
           + +    G+  + + + +            A           G ++S  V+  +  +   
Sbjct: 42  IEKLAKMGVLGTPYPKKYGGAGLDILSYAIAVEELSRVDGGTGVILSAHVSLGTYPIFAY 101

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    K +               P+ K       GLTE   G+D     +      D  
Sbjct: 102 GTEEQKKKYMI-------------PLAKGEKIGAFGLTEPNAGSDAGGTETTAVLDGD-Y 147

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +D +++ A     +G   +   + +    G  +    +K+G RS+
Sbjct: 148 YILNGGKIFITNADKADTYVVFAVTTPDIGVRGISAFIVEKGWEGFTFGDHYDKLGIRSS 207

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHY 338
           +T EL F+N         N+     +  KI +  LD   + ++   + +A+     A+ Y
Sbjct: 208 STAELIFNNVKVP---KENLLGKEGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  +  Q V+   +AD+A  I AA  L +  A   +  +S S EAA A+    
Sbjct: 265 SKERVQFGKPICQQQVISFKLADMATKIRAARLLVYSAAELKENHESYSMEAAMAKQ--- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +   +   V+ ++++  GG+GY++   + R YR++   +I  G+     + + + +
Sbjct: 322 ----YASDICLEVVNDSLQIFGGNGYLKGMDVERAYRDAKICTIYEGTNEIQRMVIASHI 377


>gi|15598789|ref|NP_252283.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9949748|gb|AAG06981.1|AE004779_13 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 575

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL R +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREQG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|289423230|ref|ZP_06425041.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156330|gb|EFD04984.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 377

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 152/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    P    + ++    G       + F        ++ I    L   + + 
Sbjct: 24  PTAEEVDETSEFPM--EIYKKMAAAGFLGIKIPQEFGGSGGDHRSYAIVMEELSKASGVS 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + SP+   ++ + +  TP+  + +   + + E                  GLTE   
Sbjct: 82  TIWISSPNSLQSTPILVDGTPQQKEKYLRPMVTGE-------------KMFAFGLTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A+I +  +K  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAKTDASAGAKGISTFIVDTK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIM 323
             G+ + + +NK+G     T ++   N        L     G +  MK L    L  A  
Sbjct: 188 LEGVSFGKAENKMGMIGCPTSDVVLDNVRVSKDDMLGKEGKGFINAMKTLSVGRLGIACQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ EAI YA+ RH  G  L      +  IA++   IAA   L +  A   D  
Sbjct: 248 ALGLAEGAMEEAIKYAKARHQFGKSLAKFQNTQFMIAEMETKIAAMRHLVYDAAYKMDLG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +EA+ A       K +  + A  VI +A++  GG GYI+E  I R YR+    SI 
Sbjct: 308 KKADKEASMA-------KLFATEEAKWVIDKALQIHGGYGYIKEYPIERMYRDIRVTSIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + + K
Sbjct: 361 EGTSEVQKMVIASSVLK 377


>gi|121533413|ref|ZP_01665241.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307972|gb|EAX48886.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 142/377 (37%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            ER +K EF  A   L       GL    +   +          I A      A    G 
Sbjct: 29  AERDEKEEFSRA---LYDAMGELGLTGICFPEQYGGAGGDYLSYILAVEELSRADDSVGV 85

Query: 151 LMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            ++ SV+     +    T    + +               P+ K       GLTE   GT
Sbjct: 86  TLATSVSLCQWPIFAYGTEEQKQKYL-------------VPLIKGKKLGAFGLTEPNAGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D A+  +      D         +  +   ++ +++ A  +   G   +   + +    G
Sbjct: 133 DAASQQTTAVLDGDHYVLNGSKIFITNGGEAEIYVVFAMTDKTKGVKGISAFILEKGMPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIM 323
             + + ++K+G R++ T+EL F +         N+     E  KI +       +  A  
Sbjct: 193 FTFGKKEHKMGIRASQTMELIFQDVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A+ YA+ R   G  +     +   +AD+A +I AA  L++R A + D+ 
Sbjct: 250 ALGIAQAALDHAVKYAKERVQFGKPIASNQAIAFMLADMATEIDAARLLTYRAAYAKDQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S+EA+ A++       +   +A  V  +A++  GG GY  E  + R  R +    I 
Sbjct: 310 RPFSKEASMAKM-------YASDVAMRVTTDAVQIFGGYGYTREYPVERLMRNAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L +
Sbjct: 363 EGTNQVQRMVISSALLR 379


>gi|254479683|ref|ZP_05092980.1| Acyl-CoA dehydrogenase, C-terminal domain protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034382|gb|EEB75159.1| Acyl-CoA dehydrogenase, C-terminal domain protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 391

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 136/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     +++  +  +    + + +          I        A    
Sbjct: 37  PRAKEIDRTGEFP--WDNVKKMANADMMGIPYPKEYGGAGGDYISYIITVEEISRACAAT 94

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   + A   +    T    + +               P+ +        LTE   
Sbjct: 95  GVILSAHTSLACFPIFQWGTKEQKEKYL-------------VPLARGEKLGAFALTEPNA 141

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD A I +      D         +  +  ++D +I+ A+ +   G   +   + +   
Sbjct: 142 GTDAAGIQTTAMLEGDHYVLNGCKIFITNGGVADVYIVFAKTDKSQGAKGISAFIVEKGF 201

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    +++ K+G R +   EL F +         N+     E  KI ++ LD   + + 
Sbjct: 202 PGFSIGKIEEKMGIRGSRAAELVFEDCIVP---KENLLGKEGEGFKIAMVTLDGGRIGIG 258

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+A       Y + R   G  +     ++  IA++A  ++AA  L +  A   +
Sbjct: 259 AQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAEMATKVSAARHLVYYAAWRKE 318

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S S EAA A       K +  + A  V  +A++  GG GY ++  + R  R++    
Sbjct: 319 NNLSYSMEAAMA-------KLFASETAMEVTTKAVQIFGGYGYTKDYPVERLMRDAKITE 371

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + + + + K
Sbjct: 372 IYEGTSEVQKMVIASNILK 390


>gi|229000129|ref|ZP_04159699.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|228759666|gb|EEM08642.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 379

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 147/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F    HAL  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---HALFDQMADLGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAL 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +         N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPA---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A  + AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATSVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|312876071|ref|ZP_07736060.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797269|gb|EFR13609.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 395

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 44  KYDKEGIFP--KDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGIAVSY 101

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 102 AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTEADAGSDVS 148

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 149 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKGYEGFYC 208

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 209 GKKEDKMGIRASSTTELIFEDCKVPKENLLGREGTGFIVAMKTFDRTRPGVAAMAVGIAQ 268

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YA+ R   G  L     ++  +AD+ ++I AA A+ +      D        
Sbjct: 269 GAYEHAVRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSG------ 322

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 323 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 382

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 383 QRNIIASEIIK 393


>gi|261419842|ref|YP_003253524.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297530200|ref|YP_003671475.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319766656|ref|YP_004132157.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376299|gb|ACX79042.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297253452|gb|ADI26898.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317111522|gb|ADU94014.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 380

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P    + R+    GL    +   +        ++ I    +       
Sbjct: 26  PYAAKWDEEAHFPL--DVFRKMGELGLLGLPFPEEYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKQKWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A   +   G  ++  L+    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAQYARQVIVTAVTGKDARGKNIITALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  +Y LD   +S+
Sbjct: 191 SPGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPQKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DKGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|237739189|ref|ZP_04569670.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31]
 gi|229423789|gb|EEO38836.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31]
          Length = 636

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  + +    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIEKFGKMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAYGTEEQKKKYL-------------TPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADMATKLRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|237737961|ref|ZP_04568442.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
 gi|229419841|gb|EEO34888.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
          Length = 639

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 75/393 (19%), Positives = 152/393 (38%), Gaps = 32/393 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
             +++    GL    + + +            A           G ++S  V+  A  + 
Sbjct: 40  DAIKKFGEMGLMGIPYPKEYGGAGMDTLSYAIAVEELSRVDGGTGVILSAHVSLGAYPIY 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P+ K       GLTE   G+D     +  + + D
Sbjct: 100 AFGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGGTETTAELVGD 146

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D +++ A     +G   +   + +    G  +    +K+G R
Sbjct: 147 -YYILNGGKIFITNADKADTYVVFAVTTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIR 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AI 336
           S++T EL F+N         N+     E  KI +  LD   + ++   + +A+     A+
Sbjct: 206 SSSTAELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIASQALGIAQGAYEHAL 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q ++   +AD+A  + AA  L +  A   +  +    E+A A+  
Sbjct: 263 EYAKERVQFGKPIAQQQIISFKLADMATKLRAARFLVYSAAELKENHEPFGMESAMAKQ- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +   +   V+ +A++  GGSGY++   + R YR++   +I  G+     + + +
Sbjct: 322 ------YASDICLEVVNDALQIFGGSGYLKGMEVERAYRDAKICTIYEGTNEIQRVVIAS 375

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
            +       E      +   G +G +   I +D
Sbjct: 376 HIIGKMPKSESKKKKDKAKGGVTGPRKNMIFKD 408


>gi|187933576|ref|YP_001885630.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
 gi|187721729|gb|ACD22950.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
          Length = 636

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 146/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     + +    G+  + + + +            A           G ++S 
Sbjct: 32  DKESKFPT--EAIEKLAKMGVLGTPYPKKYGGAGLDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  +  +    T    + +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGTYPIFAYGTEEQKQKYMI-------------PLAKGKKIGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLDGD-YYILNGGKIFITNADKADTYVVFAVTTPDIGVKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS++T EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTAELIFNNVKVP---KENLLGKEGQGFKISMQTLDGGRIGIASQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q V+   +AD+A  I AA  L +  A   +  +S 
Sbjct: 253 IAQGAYENALEYSKERVQFGKPICQQQVISFKLADMATKIRAARLLVYSAAELKENHESY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   V+ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDICLEVVNDALQIFGGNGYLKGMDVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + +
Sbjct: 366 NEIQRMVIASHI 377


>gi|148258335|ref|YP_001242920.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410508|gb|ABQ39014.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 594

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 148/566 (26%), Positives = 239/566 (42%), Gaps = 35/566 (6%)

Query: 6   IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPS----VVHKELEL 60
           + R   M    +P+         P   G+N Y +D  L  L+  + P      +   L+ 
Sbjct: 5   LKREDVMTGGARPALL------APDTTGLNFYRADPALSDLLRIHLPDTLFRHLTPHLDR 58

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI 119
           LGE        E AR+A+ + P LH     G     +E+HPA+  L R +  + G+H   
Sbjct: 59  LGELAGGY-LDECARLADRHGPVLHQRDRFGRDMQWIEYHPAYRELERAAFGEFGIHAMS 117

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPK 177
             +       K     + A  +L  Q E G     +VT   A ++A   +  +   +   
Sbjct: 118 IRKGILGWPDKYPVVAKHAFTFLFNQAEFGLGCPINVTDGCAKLLASFGSDGLKARYLDG 177

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +   +     +          G  +TEK GG+D+  +T+      D  + L G KWF S+
Sbjct: 178 LTQTDMRKLTQG---------GQFMTEKEGGSDVGTLTTVAVPEGDH-WRLHGEKWFCSN 227

Query: 238 PMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +   ++LA+ +G       VG FL+PR L+DGS N     RLK+K+G RS A+ E++ 
Sbjct: 228 ADAKVVMLLARPQGADSGTRGVGLFLMPRFLDDGSQNRYRIVRLKDKLGTRSMASGEIKL 287

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                + +G L+     + +M     L + + S + MR +  +AI  AR R V G  ++D
Sbjct: 288 EGAIAYAVGRLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVARNRVVFGQRIVD 347

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPA 410
            P+ +R +  I L    A ++SF  A++ D A++ S++ AA  RI+ P  K+   + A  
Sbjct: 348 LPLGRRQLMKILLATEQALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARK 407

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V  +A+E  GG GY+EE   AR  R++   SI  G+GN + LD L            L +
Sbjct: 408 VCGDALEMRGGIGYVEEFVTARLLRDAHLGSIWEGTGNIVALDALKRAVGRHGADAALAA 467

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI---ALASSAAALYRAGMNDIAD 527
            L   L  S             L     G AR +  +    A A  A +L     + ++ 
Sbjct: 468 DLHARLDDSNAVPQAWRDQLHRLVDRAVGFAREVAGRADNEAEARRATSLLYHVASAVSL 527

Query: 528 VFLENRFLDNCHSTHCMLHGRFNAAH 553
            +   R          +L  R    H
Sbjct: 528 TWESARIHALRGDARRLLLARLVVDH 553


>gi|294783831|ref|ZP_06749153.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294479643|gb|EFG27422.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 636

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P  H  + +    G     + + +    +       A           G ++S 
Sbjct: 32  DKENKFP--HEAIEKFGKMGFMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKKKYL-------------TPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   K  D  Y L+G K F+++   ++ +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVKEGD-YYILNGEKIFITNADVAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T +L F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSSTCQLLFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADMATKLRTARFLIYSAAELKEHHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V+ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDIALEVVNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   L
Sbjct: 366 NEIQRVVIAAHL 377


>gi|16080770|ref|NP_391598.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311679|ref|ZP_03593526.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221316006|ref|ZP_03597811.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320917|ref|ZP_03602211.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325201|ref|ZP_03606495.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|1168281|sp|P45867|ACDA_BACSU RecName: Full=Acyl-CoA dehydrogenase
 gi|853760|emb|CAA89868.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636254|emb|CAB15745.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 379

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 138/375 (36%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L R   + GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEQERFD---RELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T     ++  ++   E                   LTE   G+
Sbjct: 86  TLSAHISLCSWPLFAFGTEEQKTEYLTQLALGE-------------KIGAFALTEAGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ +  ++I D         +  +  ++D +I+ A  +       V   + +    G
Sbjct: 133 DAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVTAFIVEKDFEG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + + K+G RS+ T E+ F +        L       E  KI +  LD     ++  
Sbjct: 193 FFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLG---EEGEGFKIAMKTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A+  L+++ A      
Sbjct: 250 AVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTYQAAWLESSG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A +++MA          A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKASAMSKLMAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  +L
Sbjct: 363 EGTQEIQRLVISRML 377


>gi|295697788|ref|YP_003591026.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295413390|gb|ADG07882.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 380

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 146/405 (36%), Gaps = 34/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E+VL+   QE  R A     +     PG    D+ E       +  +    GL    W  
Sbjct: 2   EFVLTKE-QEQMREAVRAFAE-EVVAPGAAERDEQESFD--RGIFDKMAELGLAGIPWPE 57

Query: 123 SFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +         + I    L  +       + + +  ++  +    T    + +       
Sbjct: 58  EYGGAGLDMLTYVITVEELSRVDASAGVTISAHTSLASWPIYRFGTEEQKRKYL------ 111

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                   P+ + +     GLTE   GTD A + +   +  D         +  +   +D
Sbjct: 112 -------RPLAEGTKIGAYGLTEPGAGTDAANLRTTAVREGDHYVLNGSKIFITNGGEAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +++ A  +       +   + +    G  + + + K+G RS+ T+EL F N        
Sbjct: 165 IYVVFATTDREKRHRGISAFILEKGMPGFHFGKKEKKMGLRSSPTMELVFDNCIVPA--- 221

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
            N         KI ++ LD     ++   V +A+     A+ +A+ R   G  +     +
Sbjct: 222 ENRLGEEGFGFKIAMMTLDGGRNGIAAQAVGIAQGALEAAVAHAKEREQFGKSIGQFQAI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  + AA  L+++ A   D      + +A A++       +    A  V  EA
Sbjct: 282 QFKLADMATRVEAARLLTYQAAWLEDRGLPYGKASAMAKM-------YASDTAMYVTTEA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GYI E  + R  R++    I  G+     + V   L +
Sbjct: 335 VQIFGGYGYIREYPVERFMRDAKITQIYEGTNEVQRMVVARELLR 379


>gi|225872674|ref|YP_002754131.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225794071|gb|ACO34161.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 398

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 78/425 (18%), Positives = 166/425 (39%), Gaps = 41/425 (9%)

Query: 41  SLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF 99
             L  ++ A +P  +  + E L + +    A+E+A              P    WD+   
Sbjct: 4   PTLQEVLPATYPFTLTDDQEQLRKEIRDFAAREIA--------------PHVSEWDEHST 49

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTS 158
           +P    ++++    GL   I+   +         + +    L  +       + + +   
Sbjct: 50  YPL--EVVKQMGRMGLMGIIFPAEYGGSGMGYVDYVLAIEELSAVDGSVGIIVAAHNSLC 107

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           ++ + L       + + PK+ + E+                 GLTE   G+D A   +  
Sbjct: 108 SNHIFLAGNEEQRRKYIPKLATGEW-------------IGAWGLTEPGSGSDAAGARTTA 154

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            K  D         +  +   +D  +++A  +   G   +   + +    G    + +NK
Sbjct: 155 VKKGDKWVLNGSKTFITNGSYADVTVVIAVTDKTQGTHGLSAFVVEKGTPGFRPGKKENK 214

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G R++ T EL F +        L  +  G V+ M+IL    +  A +S+   R +L  +
Sbjct: 215 LGLRASDTAELIFEDCEIPEENLLGKLGEGFVDSMRILDGGRISIAALSLGIARGALDCS 274

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  + +   ++  +AD+A ++ AA  L+ R A   D     + E++ A  
Sbjct: 275 LKYVKERRQFGKAIAEFQGIQWKLADMATELDAARLLTQRAAVLKDAGNKVTRESSMA-- 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  ++A  +  EA++  GG G+I++    ++YR+    +I  G+     + + 
Sbjct: 333 -----KLYASEVAVRICDEAVQLHGGYGFIKDYPAEKYYRDVKLCTIGEGTSEIQRMVIA 387

Query: 456 NLLEK 460
             + K
Sbjct: 388 REILK 392


>gi|295707242|ref|YP_003600317.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804901|gb|ADF41967.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 377

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 141/378 (37%), Gaps = 37/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            +R ++  F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AQRDEEERFDRGIFTQM---ADLGLTGIPWPEQYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM         GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIYTFGTEEQKQKYLK-------------PMATGEKIGAYGLTEPSAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +   K  +  Y L+G K F+++   +D +++ A+ +           + +    
Sbjct: 133 DAGGMRTLAVKDGED-YILNGSKIFITNGGEADIYVVFARNDPN--EKRTSAFIIEKDMP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F +         N+     E  K+ ++ LD     ++ 
Sbjct: 190 GFSVGKKEKKLGIRSSPTTEIIFEDCRVP---KENLLGNEGEGFKVAMMTLDGGRNGIAA 246

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  +I Q  +   +AD+A  I AA  L+++ A    +
Sbjct: 247 QAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFKLADMATSIEAARLLTYQAAWLESQ 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I
Sbjct: 307 GLPYGKESAM-------SKLYAGDTAMKVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 359

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L K
Sbjct: 360 YEGTQEIQRLVISRYLAK 377


>gi|312622530|ref|YP_004024143.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202997|gb|ADQ46324.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 381

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--RDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTEADAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKGYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G RS++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRSSSTTELIFEDCKVPKENLLGREGTGFIIAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA+ R   G  L     ++  +AD+ ++I AA +L +      D        
Sbjct: 255 GAYEHAIRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|254242291|ref|ZP_04935613.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192]
 gi|126195669|gb|EAZ59732.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192]
          Length = 575

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 146/542 (26%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL + +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREEG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|218890181|ref|YP_002439045.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218770404|emb|CAW26169.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 575

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 146/542 (26%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL + +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREQG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|89894462|ref|YP_517949.1| hypothetical protein DSY1716 [Desulfitobacterium hafniense Y51]
 gi|219668887|ref|YP_002459322.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|89333910|dbj|BAE83505.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539147|gb|ACL20886.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 380

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 151/380 (39%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
            G E  D+ E  P    +  +    GL    +   +  V     ++ I    L  +    
Sbjct: 26  AGAEERDEKEEFP--REIWNKLAELGLAGITFPEKYGGVEADYLSYAIAVEELSRVDASV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + S   A+ + L  T    + +   + S E                  GLTE   
Sbjct: 84  GVTVSAHSSLCANPIYLFGTEEQKQKYLVPLASGE-------------KMGAFGLTEPMA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +   +   K  D  Y ++G K F+++   +D +++ AQ++   G   +   + +  
Sbjct: 131 GSDASGTRTTAVKDGDD-YIINGTKIFITNAYEADTYVVTAQMDKSKGNKGIAAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  + + + K+G RS+AT EL F N         N+     +  KI ++ LD   + +
Sbjct: 190 MPGFSFGKKEKKMGIRSSATYELVFDNVRVP---GENLLGQEGQGFKIAMVTLDFGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     +A  YA+ R   G  +      +  +AD+A  I AA  L ++ A   
Sbjct: 247 ASQALGIAQGAYEQARKYAKERVQFGQPIAQFQANQFKLADMATQIEAARLLVYQAAYLA 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K  S+ +A A++ A        + A  V  +A++  GG GY  E  + R  R++   
Sbjct: 307 TQHKPVSKASAMAKLHA-------SETAMWVTTQAVQMHGGYGYTREYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + + + + K
Sbjct: 360 EIYEGTSEVQRIVIGSHILK 379


>gi|78066938|ref|YP_369707.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77967683|gb|ABB09063.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 583

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/507 (27%), Positives = 234/507 (46%), Gaps = 40/507 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVL 66
           MN   +  D+  +    P   G+N ++ D  L AL+       H       L  LG  V 
Sbjct: 1   MNDTARTPDAGAS--NIPDSRGINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGSESV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + P + SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPM 239
           D   +  M          +TE+  G+D+A I ++  + +D +    + L+G KWF S+  
Sbjct: 172 DTLYQGAMF---------MTEQAAGSDVARIATRATRETDALGETVWRLTGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLLKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++   L + L + L
Sbjct: 403 GDAMEVRGGTGYIEEWSDARVVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRAFL 461

Query: 473 EQDLGSS--GKKVITILRDSISLCKED 497
              LG++         LR  ++   + 
Sbjct: 462 GDRLGAAPLPDASRAALRRILARACDA 488


>gi|291486303|dbj|BAI87378.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. natto BEST195]
          Length = 379

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 139/375 (37%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L R   + GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEQERFD---RELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T     ++  ++   E                   LTE R G+
Sbjct: 86  TLSAHISLCSWPLFAFGTEEQKTEYLTQLALGE-------------KIGAFALTEARSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ +  ++I D         +  +  ++D +I+ A  +       +   + +    G
Sbjct: 133 DAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGITAFIVEKDFEG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + + K+G RS+ T E+ F +        L       E  KI +  LD     ++  
Sbjct: 193 FFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLGQEG---EGFKIAMKTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A+  L+++ A      
Sbjct: 250 AVGIAQGALDAALQYAKERKQFGKSIGEQQGIAFKLADMATMIEASRLLTYQAAWLESSG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A +++MA          A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKASAMSKLMAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  +L
Sbjct: 363 EGTQEIQRLVISRML 377


>gi|170733514|ref|YP_001765461.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169816756|gb|ACA91339.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 583

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/514 (27%), Positives = 234/514 (45%), Gaps = 38/514 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVL 66
           MN   +  D+  +    P   G+N ++ D  L AL+       H       L  LG  V 
Sbjct: 1   MNDTARTPDTGAS--NIPDTRGINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + P++ SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++         + ++ L+G KWF S+  
Sbjct: 172 D---------TLYQGAMFMTEQAAGSDVGRIATRATCETDAHGETVWRLTGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++  +  + L + L
Sbjct: 403 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQRE-HALDALRTFL 461

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              LG++     +       L +    LAR   E
Sbjct: 462 GDRLGAAPLPEASRTALRRILVRACDALARVAGE 495


>gi|295399983|ref|ZP_06809963.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977762|gb|EFG53360.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 380

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P    + ++    GL    +   +        ++ I    +       
Sbjct: 26  PYAAKWDEEAHFP--FEVFKKMGKLGLLGIPFPEKYGGAGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKQKWL-------------VPMAKGETLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  S   I+ A   +   G  ++  ++    
Sbjct: 131 GSDAGGTRTTAVLDGDEYVINGEKCWITNAQYSRQVIVTAVTGKDERGKNIISAIIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +K+G R++ T EL F N         NV   P +  K  ++ LD   +S+
Sbjct: 191 APGFTIRSNYDKMGVRASNTCELVFENVRVP---KENVLGDPKKGFKQFLHTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERVQFGQAISKFQAIQFKLADMAMEIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EA++A       K +  +M   V  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEASFA-------KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|321313267|ref|YP_004205554.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320019541|gb|ADV94527.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
          Length = 379

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 138/375 (36%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L R   + GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEQERFD---RELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T     ++  ++   E                   LTE   G+
Sbjct: 86  TLSAHISLCSWPLFAFGTEEQKTEYLTQLALGE-------------KIGAFALTEAGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ +  ++I D         +  +  ++D +I+ A  +       +   + +    G
Sbjct: 133 DAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGITAFIVEKDFEG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + + K+G RS+ T E+ F +        L       E  KI +  LD     ++  
Sbjct: 193 FFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLG---EEGEGFKIAMKTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A+  L+++ A      
Sbjct: 250 AVGIAQGALDAALQYAKERKQFGKSIAEQQGVAFKLADMATMIEASRLLTYQAAWLESSG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A +++MA          A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKASAMSKLMAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  +L
Sbjct: 363 EGTQEIQRLVISKML 377


>gi|169334815|ref|ZP_02862008.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257553|gb|EDS71519.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM
           17244]
          Length = 378

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 138/375 (36%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  D+ E  P+    + +    G       + +         + I    L  +    
Sbjct: 26  PLAQEVDETEVFPS--ETVAKMQKLGFLGIPMPKEYGGQGCDTLTYAICVEELSRVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A  +    TP   + +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLGAGPIEKFGTPEQKEKYLRPLISGE-------------KLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   ++     D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 131 GTDASGQQTKAVLDGDE-YVLNGSKIFITNGKEADTYVIFAMTDKSKGTKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G  +   + K+G R ++T EL F++       LLG      G          +  A  
Sbjct: 190 TPGFTFGTKEKKMGIRGSSTYELIFTDCRIPKENLLGQEGRGFGIAMQTLDGGRIGIACQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L   I + + R   G  +      +  IAD+A  + AA  L ++ A + D  
Sbjct: 250 ALGLAQGALDATIEFVKERKQFGRPIAKFQNTQFQIADMATKVEAARNLVYKAAIAKDTK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S EAA A       K +  ++A  V  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 KRFSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYTREYDVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTSEVQRMVISGSL 377


>gi|320538366|ref|ZP_08038242.1| rubredoxin [Treponema phagedenis F0421]
 gi|320144781|gb|EFW36521.1| rubredoxin [Treponema phagedenis F0421]
          Length = 643

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 145/377 (38%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P  H +++     G+    + R +    R       A           
Sbjct: 26  PIAFELDQENKFP--HEVIKEFASMGMMGLPYPREYGGAGRDILSYAIAVEELSRVDGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+  S  +    T    K +               P+ K       GLTE+  
Sbjct: 84  GVILSAHVSLGSFPIFAFGTEEQKKKYL-------------TPLAKGEKIGAFGLTEENA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +      D      G  +  ++P++D +++ A     +G   +   + +   
Sbjct: 131 GSDAGGTETTAVLQGDHYILNGGKIFITNAPVADIYVVFAVTTPDIGTRGISAFIVEKGW 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G  +    +K+G RS++T EL F+N         N+     +  KI +  LD   + ++
Sbjct: 191 QGFEFGDHYDKLGIRSSSTAELIFNNVKVP---KENLLGKEGQGFKIAMATLDGGRIGIA 247

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EA+  A+ R   G  +     +   +AD+A  + AA  L +  A   +
Sbjct: 248 AQALGIAQGAYEEALEQAKEREQFGNPIGVHQGISFKLADMATKLRAARFLIYSAAELKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S S E+A A++       +   +   V+ +A++  GGSG+++   + R YR++   +
Sbjct: 308 NHESYSMESAMAKM-------YASDICLEVVNDALQIFGGSGFLKGMQVERAYRDAKITT 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + + + L
Sbjct: 361 IYEGTNEIQRVVIASHL 377


>gi|307244669|ref|ZP_07526772.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678]
 gi|306491920|gb|EFM63970.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678]
          Length = 377

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 151/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    P    + ++    G       +++        ++ I    L   + + 
Sbjct: 24  PTAEEVDETGEFPM--EIYQKMAKAGFLGIKIPKAYGGSGGDHRSYAIVMEELAKASGVS 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + SP+   ++ +    T    + +   + + E                  GLTE   
Sbjct: 82  TIWISSPNSLQSTPILRDGTEEQKEKYLRPMVTGE-------------KLFAFGLTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A+I +  +K  D  Y L+G K F++  P+SD  I+ A+    +G   +   + D  
Sbjct: 129 GSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAKTNPELGVKGISTFVVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIM 323
             G+ + + +NK+G     T ++   N        L     G +  MK L    L  A  
Sbjct: 188 LEGVSFGKAENKMGMIGCPTSDVVLENVRVSKDCMLGREGKGFINAMKTLSVGRLGIACQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ EAI YA+ RH  G  +      +  +A++   +AA   L +  A   D  
Sbjct: 248 ALGLAEGAMEEAIKYAKSRHQFGKSIAKFQNTQFILAEMETKLAAMRHLVYDAAYKMDLG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  +EA+ A       K +  + A  +I +A++  GG GYI+E  + R YR+    SI 
Sbjct: 308 QAADKEASMA-------KLFATEEAKWIIDKALQIHGGYGYIKEYPVERMYRDIRVTSIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSEVQKMVIASSLLK 377


>gi|257452534|ref|ZP_05617833.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           3_1_5R]
 gi|317059075|ref|ZP_07923560.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684751|gb|EFS21586.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R]
          Length = 637

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 146/374 (39%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     +++    G+    + + F    +       A           
Sbjct: 26  PIAFELDQENKFPE--EAIKKFAKMGMMGLPYPKEFGGAGKDILSYAIAVEELSRVDGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+  +  +A   T    K +               P+ K       GLTE   
Sbjct: 84  GVILSAHVSLGTFPIAAFGTEEQKKKYL-------------VPLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAVLEGDH-YILNGEKIFITNAPYADIYVVFAVTTPDIGTKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T +L F+N         N+     +   I +  LD   + +
Sbjct: 190 WEGFTFGDHYDKLGIRSSSTAQLIFNNVKVP---KENLLGKEGKGFNIAMATLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     EA++YA+ R   G  +  Q  +   +AD+A  + AA  L +  A   
Sbjct: 247 ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLADMATKLRAARFLVYSAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +    E+A A+        +   +A  ++ +A++  GG+GY++   + R YR++   
Sbjct: 307 EHHEPYGMESAMAKQ-------YASDVALEIVNDALQIHGGAGYLKGMPVERFYRDAKIC 359

Query: 441 SILLGSGNAMVLDV 454
           +I  G+     + +
Sbjct: 360 TIYEGTNEIQRVVI 373


>gi|149182452|ref|ZP_01860927.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus sp. SG-1]
 gi|148849845|gb|EDL64020.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus sp. SG-1]
          Length = 378

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 142/379 (37%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ER +K EF      +L++    GL        +          I A           
Sbjct: 26  PFVERMEKGEFP---REILKKMADLGLMGIAIPEKYGGSEMDFTSYISAIHELSKVSATV 82

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +   + +    T    + +  K+ S EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYVTKLASGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ S+  K  D         +  +   +D +I+ A  +   G   +   + +   
Sbjct: 130 GSDAGSLKSRAIKKDDHYVINGAKVFITNGGEADVYIVFAATDPDKGGRGISAFIVEKDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G   + TV+L F +         N+     +  KI +  LD   + ++
Sbjct: 190 PGLIIGKDEHKMGLHGSRTVQLTFEDMKVPA---ENLLGEEGQGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AEA       YA+ R   G  +  Q  +   +AD+A  + A+  L +R AN   
Sbjct: 247 AQALGIAEAAFEHSTAYAKERAQFGKPIAAQQGIGFKLADMATSVEASKLLVYRAANMRS 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E  +  +E       A I K +  K A  V  EA++  GG GY EE  + R +R++    
Sbjct: 307 EGLNCGKE-------ASIAKLFASKTAVDVTTEAIQVYGGYGYTEEYPVERLFRDAKVTE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 360 IYEGTSEIQRMVISKHLVK 378


>gi|239828624|ref|YP_002951248.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808917|gb|ACS25982.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 379

 Score =  308 bits (788), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 147/379 (38%), Gaps = 36/379 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  ER ++ EF      +L +    GL        +        ++ I    +  ++   
Sbjct: 26  PFVERMEQGEFP---RPILNKMAELGLMGITVPEEYGGAGMDFISYIIAIHEISKVSATV 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    T    K + PK+ S EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKKKYVPKLSSGEY-------------LGAFCLTEPGA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
           G+D+ ++ ++  +  D  Y L+G K F+++   +D +I+ A+ +    G   +   + + 
Sbjct: 130 GSDVKSLKTKAVRQGD-YYILNGSKIFITNGGEADTYIVFARTDPNEKGSRGISAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G   + TV++   +         N+     +  KI +  LD   + 
Sbjct: 189 DTPGFIIGKDEKKMGLHGSRTVQITLEDAKVPA---ENLLGEEGQGFKIAMANLDVGRIG 245

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +AEA       YA+ R   G  + +Q  +   +AD+A  + AA  L +  A  
Sbjct: 246 IAAQSLGIAEAALEHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     +EA+ A       K +  + A     EA++  GG+GY ++  + R +R++  
Sbjct: 306 RAQGLPCGKEASMA-------KLFASRTAMENAIEAVQIFGGNGYTKDYPVERLFRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     L +   L
Sbjct: 359 CEIYEGTSEIQRLVISKYL 377


>gi|299144482|ref|ZP_07037561.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517570|gb|EFI41310.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 645

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 141/361 (39%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++   +G     + + +    +   ++ I    L  +       L + +      + 
Sbjct: 40  EIVKKIGENGWMGLPYSKEYGGAGKDVISYAIAVEELSRVDGGVGVILSAHTSLGTYPIE 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +   + S E                  GLTE   G+D     +  +   D
Sbjct: 100 AFGTEEQKQKYLVPLASGE-------------KIGAFGLTEPEAGSDAGGTETTAELDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 G  +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS
Sbjct: 147 YYILNGGKIFITNAPKADFYVVFAVTTPGIGTHGISAFIVEKGWEGFSFGDHYDKLGIRS 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T EL F+N         N+     +  +I +  LD   + ++   + +A+     A+ 
Sbjct: 207 SSTAELIFNNVKVP---KENLLGKEGQGFRIAMQTLDGGRIGIASQALGIAQGAYEAALK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +  Q ++   +AD+A  + AA  L +  A      ++   E+A A+   
Sbjct: 264 YAKERIQFGRPIAQQQIISFKLADMATKLRAARFLVYSAAEMKHNHENYGMESAMAKQ-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +   +A  ++ +A++  GG+GY++   + R YR++   +I  G+     + + + 
Sbjct: 322 -----YASDVALEIVNDALQIHGGNGYLKGMDVERFYRDAKITTIYEGTNEIQRVVIASH 376

Query: 458 L 458
           +
Sbjct: 377 I 377


>gi|296387903|ref|ZP_06877378.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 575

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E    LE LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPLLEWLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    +  HP + AL R +  +    S+  R   P        ++ A  +L 
Sbjct: 75  LAPRTRRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGPPP-----LVKYALTHLF 129

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P + + + P + SR++D   +  M          
Sbjct: 130 VQAEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF--------- 180

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+A   +  ++   G + L G KWF S+P +D  ++LA+ EG       V  
Sbjct: 181 MTEQAAGSDVARTRTVAREQG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTL 239

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+P++ EDG+ N     RLK+K+G+RS A+ E+       +L+G++      + DM  +
Sbjct: 240 FLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNM 299

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +L+EA+  AR R   G  LID P+M++ +  + L    A ++  +
Sbjct: 300 SRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQ 359

Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A     A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 360 IATLLPRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLV 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL------GSSGKKVITILR 488
           R++   SI  G+ N + LDV   + +   L E L   L + L      G +      +L 
Sbjct: 420 RDAHLGSIWEGTSNIVALDVARAVSREQAL-EPLQRHLRRLLDDSDLPGDARDLFDELLV 478

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHG 547
             ++   +     R   E++  A SA          I   +  +R   D        L  
Sbjct: 479 RVVATMADVAE--RRQDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALAFLVA 533

Query: 548 RF 549
           R 
Sbjct: 534 RH 535


>gi|226315081|ref|YP_002774977.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis
           NBRC 100599]
 gi|226098031|dbj|BAH46473.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus
           brevis NBRC 100599]
          Length = 380

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 143/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E      ++  +    GL    W   +        ++ I    L  +    
Sbjct: 26  PTAAERDEEECFD--RSIFEQMAELGLTGIPWPEQYGGAGADYLSYVIAVEELSRVDASI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +    ++  +    T    + +               P+ +        LTE   
Sbjct: 84  GVTLSAHVSLASWPIYKFGTEEQKQTFL-------------RPLAEGKKMGAYCLTEAGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A + +   +  D  Y L+G K F+++   ++ +I+ A  +  +    +   + +  
Sbjct: 131 GSDSAGMRTTAVRDGDH-YILNGTKIFITNAGEAEIYIVFAVTQPELNHKGITAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
            +G    + + K+G RS+ T+ + F +    +    N      +  KI ++ LD     +
Sbjct: 190 MDGFTMGKKEKKLGIRSSPTLAVNFEDVRVPV---ENRLGEEGQGFKIAMMTLDGGRNGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A+     A +YA+ R   G  +     ++  +AD+A  I A+  L+++ A   
Sbjct: 247 AAQALGIAQGAYEHARNYAKERSQFGKPIASLQAIQFKLADMATKIEASRLLTYQAAWLE 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+     + +A        +K +    A  V  EA++  GG GY  E  + R  R++   
Sbjct: 307 DQGLPYGKASAM-------SKVFAGDTAMEVTTEAVQVFGGYGYTREYPVERFMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + + N L K
Sbjct: 360 QIYEGTNEIQRVVISNFLLK 379


>gi|312127705|ref|YP_003992579.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777724|gb|ADQ07210.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 381

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--RDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTESDAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKGYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRASSTTELIFEDCKVPKENLLGREGTGFIVAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA+ R   G  L     ++  +AD+ ++I AA A+ +      D        
Sbjct: 255 GAYEYAIRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|226309399|ref|YP_002769359.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188516|dbj|BAH36620.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 571

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 136/443 (30%), Positives = 214/443 (48%), Gaps = 27/443 (6%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   +E     L+ LG         ELA +A+ N P L  + 
Sbjct: 1   MNFAYTDPALTAVVDRWTAGADRETLNGLLDRLGRDAAGR-LSELADIADKNPPVLQQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
             G+R D++ +HPA+  L R + ++ GL      +             +    Y+  Q E
Sbjct: 60  KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHGWDSVHPPLAKYLASYIFVQAE 119

Query: 148 AGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T  +A  + +   P V   W   + S +          + +    + +TE 
Sbjct: 120 FGLACPVSMTDAAARTLRMFGDPAVFSPWIDALTSTD---------PEQAKTGAMFMTEI 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLV 258
           + GTDIA   ++ ++  DG + L+G KWF S+P +D  I LA+  G        VG F+V
Sbjct: 171 QAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGSTRGVGMFMV 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P+ +  G  N L   RLK+K+G RS  + E+  +      +G+L+     + +M     L
Sbjct: 230 PKTVGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMAEMVNTSRL 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A+ S + MR ++ EA+ +++ R V G  L DQP+M+  +  +ALD  A+ AL    A 
Sbjct: 290 SNAMRSSALMRRAVREAVEHSKSRVVFGKKLFDQPLMRATLLPLALDAEASLALVAYSAQ 349

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               A    E+A A  R++ PI K++ CK A  V  EAME  GG+GYIEE + AR  R++
Sbjct: 350 CLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWANARLVRDA 409

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
              SI  GS N + LDVL  L K
Sbjct: 410 HLGSIWEGSSNVIALDVLRCLRK 432


>gi|228994060|ref|ZP_04153961.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|229007650|ref|ZP_04165243.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228753601|gb|EEM03046.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228765708|gb|EEM14361.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 379

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 145/378 (38%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F  A    +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFDRALFDQM---ADLGLTGIPWPEEYGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGTEEQKQKFL-------------RPMAEGKKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDAL 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G RS+ T E+ F +         N+     +  KI +  LD     ++ 
Sbjct: 192 GFSVGKKESKLGIRSSPTTEIMFEDCRIPA---ENLLGEEGQGFKIAMQTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YAR RH  G  +  Q  +   +AD+A  + AA  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATSVEAARLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A        +K +    A  V  EA++  GG GY ++  + R  R++    I
Sbjct: 309 GLPYGKESAM-------SKVFAGDTAMKVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 362 YEGTQEIQRLVISRMLTK 379


>gi|310658439|ref|YP_003936160.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium
           sticklandii DSM 519]
 gi|308825217|emb|CBH21255.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium
           sticklandii]
          Length = 379

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 144/378 (38%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++E  P     + + +  G     + + +                Y MA  E 
Sbjct: 26  PLAAEVDEMERFPV--ETVEKMVKAGFMGIPFPKKYGGEGGDNLG-------YAMAVEEL 76

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +     T+  +V+  T+   H  +  +  + E       P+ K       GLTE   G
Sbjct: 77  SRVCG---TTGVIVSAHTSLGAHPIF--EFGTEEQKEKFLVPLAKGEKLGAFGLTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD A   +      D         +  ++  +  +I++A  + + G   +   + D    
Sbjct: 132 TDAAGQQTTAVLDGDEYVLNGSKIFITNAGYAHTYIIMAMTDKKAGTRGISAFIVDADTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G      + K+G R +AT EL F N     +   N+        K+ +  LD   + ++ 
Sbjct: 192 GFSVGPKEKKLGIRGSATCELIFENCR---IPKENILGKEGIGFKVAMKTLDGGRIGIAA 248

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A     E IHY + R   G  + +    +  +AD+A  I +A  L ++ A + D+
Sbjct: 249 QALGIAQGALDETIHYVKERKQFGRSIANFQNTQFQLADMAAKIESARLLVYKAAYNKDK 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             S S EAA A+++A        + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 309 GLSYSYEAAMAKLVAA-------ETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 362 YEGTSEVQRMVISAALLK 379


>gi|221198466|ref|ZP_03571512.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221208585|ref|ZP_03581586.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221171576|gb|EEE04022.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221182398|gb|EEE14799.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 583

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 141/515 (27%), Positives = 231/515 (44%), Gaps = 39/515 (7%)

Query: 11  AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYV 65
             +  H P+     +   P   G+N +S D  L AL+       H      +L  LG  V
Sbjct: 1   MNDTAHTPAAGASNI---PDSRGLNFFSVDPDLGALLRLHLGDAHYTELEPQLRALGARV 57

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSF 124
            S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL         
Sbjct: 58  -SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYSELGLSALSHQPDA 116

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSRE 182
            P        ++ A  +L  Q E G     S+T +    L       +   + P + SR+
Sbjct: 117 APP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDRELVARYLPMLASRD 170

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSP 238
           +D   +  M          +TE+  G+D+  I ++  +      D ++ L G KWF S+ 
Sbjct: 171 FDTLYQGAMF---------MTEQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNA 221

Query: 239 MSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+   
Sbjct: 222 DADLAMVLARPDGAPDGIHGLALFLLPKTLADGTRNHYRIVRLKDKLGSRSMASGEIVLD 281

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               +L+G++      + DM  +  L + + +   MR ++ EA+H A  R   G  LID 
Sbjct: 282 GAHAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDM 341

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAV 411
           P+M+R +  + L   AA  +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V
Sbjct: 342 PLMQRQLMKMLLPAEAARTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRV 401

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV     +   L + L + 
Sbjct: 402 TGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAARREQAL-DALRTF 460

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           L   LG++     +       L +   GLAR   +
Sbjct: 461 LGDRLGAAPLPDASRAALRRILARACDGLARVAAD 495


>gi|311070236|ref|YP_003975159.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310870753|gb|ADP34228.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 379

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 141/378 (37%), Gaps = 35/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F       +      GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEQERFDRGLFQEM---ADLGLTGIPWPEQYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +      +    T    + +               P+         GLTE   G+
Sbjct: 86  TLSAHTSLCGWPLYAYGTEEQKQTYL-------------TPLALGEKIGAYGLTEAGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++I D  Y L+G K F+++  + D +I+ A  +       V   + +    
Sbjct: 133 DAGGMKTVAERIGDD-YLLNGSKIFITNGGAADIYIVFAVTDPEQRKKSVTAFIVEKGFE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F +         N      E  KI +  LD     ++ 
Sbjct: 192 GFSIGKKEKKLGIRSSPTTEIIFEDCLVPAK---NRLGEEGEGFKIAMSTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A+  L+++ A     
Sbjct: 249 QAVGIAQGALDAALQYAKERKQFGKPVAEQQAIAFKLADMATMIEASRLLTYQAAWLESS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                + +A ++++A          A  V  EA++  GG GY ++  + R+ R++    I
Sbjct: 309 GLPYGKASAMSKLLAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L  
Sbjct: 362 YEGTQEIQRLVISRMLAN 379


>gi|194016433|ref|ZP_03055047.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194011906|gb|EDW21474.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 380

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 136/375 (36%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER +   + PA    +      GL    W      +     A+ I    L  +      
Sbjct: 29  AERDETETYDPAIFRQM---AELGLTGIPWPEEVGGIGSDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  ++  +    T    + +               P+ +        LTE   G+
Sbjct: 86  TLSAHTSLASWPIYTFGTDEQKETYLK-------------PLAEGQKVGAYALTESGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +   K            +  +  ++D +I+ A  +           + +    G
Sbjct: 133 DAGGMKTTAVKAGSEYVLNGAKIFITNGGIADYYIVFAVTDQEATSRNTTAFIVEKETPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +     + + N      E  KI ++ LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIRFEDCR---IHERNRLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  +I    +   +AD+A  I A+  L+++ A    +A
Sbjct: 250 AVGIAQGALDAAVDYAKERKQFGKPIIQHQGIAFKLADMATAIEASRLLTYQAAWLETKA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKLFAGDTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 363 EGTQEIQRLVISRKL 377


>gi|94314812|ref|YP_588021.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93358664|gb|ABF12752.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 598

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/532 (25%), Positives = 227/532 (42%), Gaps = 35/532 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G + +++D  L AL+     A+  + +   LE +G         ELA  A++  P
Sbjct: 23  VPDRHGASLFTADPDLRALLPLYLPADLFNHLLPHLERMGALAGG-VLDELANEADHAPP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            L      G    ++  HP++  L R +  + GL  +          +      + A  Y
Sbjct: 82  TLSHRIRTGLDAQRIHKHPSYVELERVAFSEFGLAAASHRGGVLGWDKPMPPAAKYALTY 141

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     S+T +    L     P +   + P + ++ +D   +  M        
Sbjct: 142 LFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVDRFLPNLTTQVFDDLYQGAMF------- 194

Query: 200 LGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVE------- 250
             +TE+  G+D+AA T++  +  +  G + L G KWF S+P +   ++LA+VE       
Sbjct: 195 --MTEQGAGSDVAATTTRAIRDGNAEGGWRLVGDKWFCSNPDAALAMVLARVEEADGSAV 252

Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                V  FL+PR L DGS N     RLK+K+G RS A+ E+       +++G+L     
Sbjct: 253 AGIKGVSLFLLPRTLADGSANHFRIIRLKDKLGTRSMASGEIRLEGAHAYMVGELGRGFV 312

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM     L + + +   MR +L E    AR R   G  L D P+M+R +  + L   
Sbjct: 313 QMADMINNSRLSNGVRAAGLMRRALTEGQFIARERRAFGKRLADMPLMRRQLLKLTLPTE 372

Query: 368 AATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  + F+ A +   A +   +A    RI+ P+ K+  C+ A  V  +AME  GG GYIE
Sbjct: 373 QARTMVFQTAEALRRADAGDADAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCGYIE 432

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E S  R  R++   SI  G+ N + LDVL  + +  +L   L + L+  LG +       
Sbjct: 433 EWSDPRLVRDAHLGSIWEGTSNIVALDVLRAIRREGSLP-VLQAHLQALLGDTPMHATAR 491

Query: 487 LRDSISLCKEDKGLARFL---TEKIALASSAAALYRAGMNDIADVFLENRFL 535
               ++L        R      +   LA  AA+      + +A  +   +  
Sbjct: 492 ATFDLALANTVALATRAAEAGADGDVLARQAASALYHVTSAVAMAWEAGQIG 543


>gi|206560596|ref|YP_002231361.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198036638|emb|CAR52536.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 583

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 140/514 (27%), Positives = 234/514 (45%), Gaps = 38/514 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVL 66
           MN   +  D+  +    P   G+N ++ D    AL+         + +   L  LG  V 
Sbjct: 1   MNDTARTPDTGAS--NIPDSRGINFFTVDPDFGALLKLHLGDARYAELEPRLHALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + P + SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPM 239
           D         T     + +TE+  G+D+  I ++         + ++ L+G KWF S+  
Sbjct: 172 D---------TLYQGAMFMTEQAAGSDVGRIATRATCETDVHGETVWRLTGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV    ++  +  + L + L
Sbjct: 403 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQRE-HALDALRTFL 461

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              LG++     +       L +   GLAR   E
Sbjct: 462 GDRLGAAPLPEASRTALRRILARACDGLARVADE 495


>gi|168179253|ref|ZP_02613917.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum NCTC 2916]
 gi|226950255|ref|YP_002805346.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|182669735|gb|EDT81711.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum NCTC 2916]
 gi|226840911|gb|ACO83577.1| acyl-CoA dehydrogenase family protein/electron transfer protein
           [Clostridium botulinum A2 str. Kyoto]
          Length = 635

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 146/369 (39%), Gaps = 34/369 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P     + +    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPL--EQIHKLADMGMMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  +A   T    K +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGSYPIAAYGTEEQKKKYL-------------VPLAKGEKIGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A      G   +   + + S  G  +
Sbjct: 137 TETTALLEGDH-YILNGEKIFITNAGEADIYVIFAVTTPNTGTRGISAFIVEKSFEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GKHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGDGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q ++   +AD+   + AA  L +  A+  +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICHQQIISFKLADMVTKLRAARLLVYSAADMKENHERY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 SMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVL 455
                + + 
Sbjct: 366 NEIQRVVIA 374


>gi|205375297|ref|ZP_03228087.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
 gi|205375428|ref|ZP_03228217.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
          Length = 380

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 142/376 (37%), Gaps = 30/376 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      +  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---RDIFDKMAELGLTGIPWPEEYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   V    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPVYKFGTEEQKQKYL-------------RPMAQGEKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           D   + +  +   D  Y L+G K F+++  ++D +++ A  +            + +   
Sbjct: 133 DAGGMRTTARLEGDH-YILNGSKIFITNGGIADIYVVFALTDSEKKQRGGTTAFIVESGF 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
            G    + + K+G RS+ T E+ F          L N+  G    M  L       A  +
Sbjct: 192 EGFSVGKKEKKLGIRSSPTTEIIFEECKVPKENMLGNLGEGFKIAMMTLDGGRNGIAAQA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L E+I YA+ R   G  +  Q  +   IAD+A  I A+  L+++ A    E  
Sbjct: 252 VGIAQGALDESIRYAKEREQFGKPIASQQGISFKIADMATSIEASRLLTYQAAWLESEGL 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E+A +++MA          A  V  +A++  GG GY ++  + R  R++    I  
Sbjct: 312 PYGKESAMSKLMAG-------DTAMNVTTDAVQIFGGYGYTKDYPVERFMRDAKITQIYE 364

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +  +L K
Sbjct: 365 GTQEIQRLVISRMLTK 380


>gi|160915342|ref|ZP_02077554.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991]
 gi|158432733|gb|EDP11022.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991]
          Length = 634

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P+    + +    GL    + + +            A           G ++S 
Sbjct: 32  DKENQFPS--EQIAKFADMGLMGIPYPKEYGGAGLDVLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +         K +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGNEEQKKKYL-------------VPLAKGEKIGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G+K F+++   +D +++ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEGDH-YVLNGNKIFITNADKADIYVVFASTNPELGTKGISAFIVEKGMGGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T EL F++         N+     E  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKMGIRSSSTAELIFNDVRVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   ++ +  
Sbjct: 253 IAQGAYENALAYAKEREQFGKPIAQQQGIAFKLADMATKLRCARMLVYSAAELKEQHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A       K +   +A  V  +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMA-------KLYASDIALEVCNDALQIFGGSGYLKGMDVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + L
Sbjct: 366 NEIQRVVIASHL 377


>gi|182419350|ref|ZP_02950602.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237666601|ref|ZP_04526586.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376681|gb|EDT74253.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237657800|gb|EEP55355.1| butyryl-CoA dehydrogenase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 379

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 144/377 (38%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G+    + +          ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVKKMGELGMMGIPFSKEVGGAGGDVLSYIISVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    TP     + P + S                    GLTE   
Sbjct: 84  GVILSAHTSLCASVINENGTPDQKAKYLPDLCSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +  +   D  Y L+G K F+++  +++ FI+ A  +  +G   +   + + S
Sbjct: 131 GTDAAGQQTTARLEGDH-YVLNGSKIFITNGGVAETFIVFAMTDKSMGTRGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L+NK+G R+++T EL F +        +     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLENKMGIRASSTTELIFEDCIVPKENLIGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA+ Y + R      L     ++  IA++ + I AA  L ++ A      
Sbjct: 250 ALGIAEGAFDEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKIEAAKHLVYKAAWKKQNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 MPYSVDAARA-------KLFAADVAMEVTTKAVQLFGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|188586496|ref|YP_001918041.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351183|gb|ACB85453.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 379

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 147/381 (38%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           P     D+ E  P  +   ++R    G++     + +      + A+ I    L      
Sbjct: 26  PIAAEIDETERFPTENVDQMQRYKMMGVNV---PKEYGGAGGDELAYAITVEELSRACAT 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                 + +  +   +    T    + +   + S E                  GLTE  
Sbjct: 83  TGIICSAHTSLACWPILKYGTEEQKQKYLKPLASGE-------------KIGAFGLTEPN 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D  +  ++ +   D  Y ++G K F+++   +D +I+ A  E   G   +   + D 
Sbjct: 130 AGSDAGSQETRAELKDDH-YLINGTKIFITNGDEADTYIVFAMTEPDKGVKGISAFIVDR 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G    + + K+G + +AT EL F N         N+     +  KI +  LD   + 
Sbjct: 189 DTPGFSVGKREKKMGIKGSATTELIFENMKVP---KENLLGKEGQGFKIAMKTLDGGRIG 245

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   + +A     E ++Y + R      +     ++  +AD++  + AA  L +R A +
Sbjct: 246 VAAQALGIAQGALDETVNYTKEREQFNRPIAKFQGLQFEMADMSTQVEAARLLVYRAAMA 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + K  ++EAA A       K +  ++A  V  +A++  GG GY ++  + R  R++  
Sbjct: 306 KAQGKPYTKEAAMA-------KLYASEVAMHVANKAIQLHGGYGYTKDYPVERMLRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 359 TEIYEGTSEVQRMVISGDLLK 379


>gi|312884108|ref|ZP_07743820.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368156|gb|EFP95696.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 384

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 87/400 (21%), Positives = 155/400 (38%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     +     P    WD+    P   ++LR +   G        
Sbjct: 2   DFELTEEQRAFADTAEQFARE--RLAPMAAEWDEKHEFP--KSVLREAGELGFMSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+       M+    +  + + + PK+ + E
Sbjct: 58  EQGGLGLSRLDSSIVFEKLAMGCTSTAAFMTIHNMVTWMIGSFGSEEIKQQYCPKLITAE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
           +                  LTE   G+D AA+T+   K++D  Y L+G K F+S    +D
Sbjct: 118 W-------------LGSYCLTEPNAGSDAAALTTSA-KLTDEGYVLNGSKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+  G  G   V   +   + NG+ Y R + K+G  S  T  + F N        
Sbjct: 164 VLVVMART-GEPGAKGVSAFVVPANANGISYGRREPKMGWNSQPTRSITFDNVLVEKSNL 222

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G +  MK L    ++ A  SV   + +L +A  Y + R   G  + D   ++  
Sbjct: 223 LGEEGQGFIFAMKGLDGGRINIATCSVGTAQHALEQATQYMQERKQFGKPIADFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A+  D   ++      A     + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAASKLDNGDTQ------ATTYCAMAKRFATDIGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI E  + RH+R+   + IL G+   M L +   L
Sbjct: 337 HGGYGYIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|317130791|ref|YP_004097073.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475739|gb|ADU32342.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 379

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 138/377 (36%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER +   F  A    +      GL    W   +  +     ++ I    L  +      
Sbjct: 29  AERDEHERFDRAIFDQMG---ELGLTGIPWPEKYGGIGADYVSYVIAVEELSRVDASIGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +    +   +    T    + +               P+ +       GLTE   G+
Sbjct: 86  TLSAHISLAGWPIYKFGTEEQKERFL-------------RPLAEGRKLGAYGLTESGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D A + +  ++            +  ++  ++ +++ A  +           + +    G
Sbjct: 133 DAAGMRTTAKRDGSDYVLDGSKIFITNAGEAEIYVVFALTDPESKHKGCSAFIVEKGMPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + ++K+G RS+ T+E+ F           N+     E  KI ++ LD     ++  
Sbjct: 193 FSMGKKESKLGIRSSPTLEIIFDGCRVP---KENLLGKEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     +I YA+ R   G  +  Q  +   IA++A  + A+  L+++ A    E 
Sbjct: 250 AVGIAQGALDASIEYAKERKQFGKPIGAQQAISFKIAEMATKVEASRLLTYQAAWRESEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S  +E+A        +K +    A  V  EA++  GG GY +E  + R+ R++    I 
Sbjct: 310 LSYGKESAM-------SKLFAGDSAMEVTTEAVQVFGGYGYTKEYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +  +L K
Sbjct: 363 EGTNEIQRLVISKMLLK 379


>gi|257466398|ref|ZP_05630709.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917554|ref|ZP_07913794.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691429|gb|EFS28264.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 637

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 146/374 (39%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     +++    G+    + + F    +       A           
Sbjct: 26  PIAFELDQENKFPE--EAIKKFAKMGMMGLPYPKEFGGAGKDILSYAIAVEELSRVDGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+  +  +A   T    K +               P+ K       GLTE   
Sbjct: 84  GVILSAHVSLGTFPIAAFGTEEQKKKYL-------------VPLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAVLEGDH-YILNGEKIFITNAPYADIYVVFAVTTPDIGTRGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T +L F+N         N+     +   I +  LD   + +
Sbjct: 190 WEGFTFGDHYDKLGIRSSSTAQLIFNNVKVP---KENLLGKEGKGFNIAMATLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     EA++YA+ R   G  +  Q  +   +AD+A  + AA  L +  A   
Sbjct: 247 ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLADMATKLRAARFLVYSAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +    E+A A+        +   +A  ++ +A++  GG+GY++   + R YR++   
Sbjct: 307 EHHEPYGMESAMAKQ-------YASDVALEIVNDALQIHGGAGYLKGMPVERFYRDAKIC 359

Query: 441 SILLGSGNAMVLDV 454
           +I  G+     + +
Sbjct: 360 TIYEGTNEIQRVVI 373


>gi|296331357|ref|ZP_06873829.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676344|ref|YP_003868016.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151472|gb|EFG92349.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414588|gb|ADM39707.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 379

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 137/375 (36%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      L R   + GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEQERFD---RELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     +  +    T     ++  ++   E                   LTE   G+
Sbjct: 86  TLSAHISLCSWPLFAFGTEEQKTEYLTQLALGE-------------KIGAFALTEAGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +  ++I D         +  +  ++D +I+ A  +       +   + +    G
Sbjct: 133 DAGGMKTTAERIGDDYVLNGSKVFITNGGIADIYIVFAVTDPEKKKKGISAFIVEKEFEG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + + K+G RS+ T E+ F +         N      E  KI +  LD     ++  
Sbjct: 193 FLTGKKEKKLGIRSSPTTEIMFEDCVVPA---ANRLGEEGEGFKIAMKTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+ YA+ R   G  + +Q  +   +AD+A  I A+  L+++ A      
Sbjct: 250 AVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTYQAAWLESSG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               + +A ++++A          A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKASAMSKLLAG-------DTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  +L
Sbjct: 363 EGTQEIQRLVISRML 377


>gi|220920693|ref|YP_002495994.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945299|gb|ACL55691.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 564

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 142/520 (27%), Positives = 215/520 (41%), Gaps = 34/520 (6%)

Query: 29  PLFIGMNAYSSDSLLVAL-----IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y +D    AL            +   L+ LG         ELA  A+ N P 
Sbjct: 12  PDARGLNLYRADRDAAALFGFYMPDTLFRHLDPHLDRLGALAGGH-LDELAATADRNPPT 70

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      GE    VE HPA+  + R +  + GL                    + A  YL
Sbjct: 71  LRLRRRTGEDCAIVEKHPAYVEMERLAYAEFGLAALSHRGGVLGWPEPMLPAAKYALTYL 130

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             Q E G     S+T +    L     P + + +  ++ S ++D         T     +
Sbjct: 131 FVQAEFGLCCPVSMTDSLTRTLKRYGDPALVERFFSRLTSLDFD---------TLAQGAM 181

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE+  G+D+AA T++ ++ +DG + L+G KWF S+  +D  ++LA+ E   G   V  
Sbjct: 182 FMTEQGAGSDVAATTTRAEEQADGTWRLTGDKWFCSNADADLAMVLARSEPVSGLKGVSL 241

Query: 261 LL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L      DG PN     RLK+K+G RS A+ E+       +L+G+       + DM   
Sbjct: 242 FLLPKQRRDGLPNDFRILRLKDKLGTRSMASGEIRLEGAEAYLVGERGRGFHQMADMINN 301

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR +  EA+  A RR   G  LI  P+M+R +A + +    A  + F 
Sbjct: 302 SRLSNGVRAAGLMRRAATEALFIACRRQAFGRPLIALPLMRRQLAKMLVWTEQARTMVFL 361

Query: 376 LANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A++   A     EAA   RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 362 TADALHRANGGDPEAARLTRILTPLIKFRACRDARRVTGDAMEVRGGCGYIEEWSDPRLV 421

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILR 488
           R++   SI  G+ N + LDVL  + + T L       ++L    + D            R
Sbjct: 422 RDAHLGSIWEGTSNIVALDVLRAITRDTALPALRTHLKELLDAAQLDRAEREAFEAAFAR 481

Query: 489 DSISLCKED----KGLARFLTEKIALASSAAALYRAGMND 524
                          LAR     +  A +AA L R     
Sbjct: 482 ACAFAEAAAREASDTLARQAASGLYHAVTAAGLAREAAGA 521


>gi|121534270|ref|ZP_01666094.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307040|gb|EAX47958.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 140/375 (37%), Gaps = 32/375 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+ E+      L       GL    +   +          I A           G  +
Sbjct: 30  DRDEKEYFS--RELYNAMGELGLTGICYPEKYGGADSDYLSYIIAIEELSKVDAGLGIAL 87

Query: 153 SPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S +V+  A  +    T    + +               P+ + +     GLTE   GTD 
Sbjct: 88  SATVSLCAWPIYTYGTEEQKQKYL-------------RPLVEGTKMGAFGLTEPNAGTDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A+  +      D         +  ++  ++ +++ A  +   G   +   + +    G  
Sbjct: 135 ASQQTTAVLNGDHYVINGSKMFITNAGEAEIYVIFAMTDKSKGVKGISAFILEKGMPGFT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
           + + ++K+G RS+ T+EL F +         N+     E  KI +  LD   + V+   +
Sbjct: 195 FGKKEHKMGIRSSQTMELIFQDVKVP---KENLLGKEGEGFKIAMTTLDGGRIGVAAQAL 251

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A+     A+ YA+ R   G  +     +   +AD+A  + AA  L++R A    +   
Sbjct: 252 GIAQAALDYAVKYAKERVQFGKPIAANQAISFMLADMATKVDAARLLTYRAAYLKQQGLP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S+EAA A++       +   +A AV  +A++  GG GY  E  + R  R++    I  G
Sbjct: 312 YSKEAAMAKM-------YASDVAMAVTTDAVQIFGGYGYSREYPVERLMRDAKITQIYEG 364

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L +
Sbjct: 365 TNQVQRMVISGALLR 379


>gi|161524286|ref|YP_001579298.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189350958|ref|YP_001946586.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160341715|gb|ABX14801.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189334980|dbj|BAG44050.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 583

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 141/515 (27%), Positives = 232/515 (45%), Gaps = 39/515 (7%)

Query: 11  AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYV 65
             +  H P+     +   P   G+N +S D  L AL+       H      +L  LG  V
Sbjct: 1   MNDTAHTPAAGASNI---PDSRGLNFFSVDPDLGALLRLHLGDAHYTELEPQLRALGARV 57

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSF 124
            S    E A  A+ + P L      GE   +++  PA+ AL R +  + GL         
Sbjct: 58  -SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDA 116

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSRE 182
            P        ++ A  +L  Q E G     S+T +    L       +   + P + SR+
Sbjct: 117 APP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDRELVARYLPMLASRD 170

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSP 238
           +D   +  M          +TE+  G+D+  I ++  + +D     ++ L G KWF S+ 
Sbjct: 171 FDTLYQGAMF---------MTEQAAGSDVGRIATRAARDTDAHGNTVWRLYGDKWFCSNA 221

Query: 239 MSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+   
Sbjct: 222 DADLAMVLARPDGAPDGIHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLD 281

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               +L+G++      + DM  +  L + + +   MR ++ EA+H A  R   G  LID 
Sbjct: 282 GAHAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDM 341

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAV 411
           P+M+R +  + L   AA  +  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V
Sbjct: 342 PLMQRQLMKMLLPAEAARTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRV 401

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV     +   L + L + 
Sbjct: 402 TGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAARREQAL-DALRTF 460

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           L   LG++     +       L +   GLAR   +
Sbjct: 461 LGDRLGAAPLPDASRAALRRILARACDGLARVAAD 495


>gi|282883257|ref|ZP_06291855.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B]
 gi|300814305|ref|ZP_07094577.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281296887|gb|EFA89385.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B]
 gi|300511572|gb|EFK38800.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 380

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 131/376 (34%), Gaps = 28/376 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
            P     D  E  P     +++    G     + + +        A+ +    L      
Sbjct: 25  DPVAADVDATEEVPM--ENVKKLARYGFFGIPFPKEYGGQGADYLAYSMAVEELSKKCAT 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               + + +    + +         K + P + S                    GLTE  
Sbjct: 83  TGVIVSAHTSLCCAPIFENGNEEQKKKYLPDLLSG-------------RKIGAFGLTEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GTD +   +      D  Y L+G K F+++   +D F+++A  +   G   +   + + 
Sbjct: 130 AGTDASGQKTTAVLDGDE-YVLNGSKIFITNGGFADVFVVIAVTDKTKGYKGISAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAI 322
              G      ++K+G R ++T EL F +        L     G    +K L    +  A 
Sbjct: 189 GTPGFSVGEPEDKMGIRGSSTCELIFEDCRIPKENLLGREGKGYTLALKTLDGGRIGIAS 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     ++ E + Y + R   G  +      +  +AD+     AA  L +R A++   
Sbjct: 249 QALGIAEGAIDETVKYVKERKQFGKRISQFQNTQFQLADMQTKTDAAQLLVYRAASTKGN 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A       K +  + A  V    ++  GG GY  +  I R  R++    I
Sbjct: 309 GEEYMHQAAMA-------KLFAAENASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + V N +
Sbjct: 362 YEGTSEVMRMVVSNWM 377


>gi|326930039|ref|XP_003211160.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Meleagris
           gallopavo]
          Length = 638

 Score =  306 bits (784), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 135/558 (24%), Positives = 234/558 (41%), Gaps = 53/558 (9%)

Query: 4   REIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKE----L 58
           +++   L M    + +++LF   Q     G N Y  D+LL + + A+ P  V +E    L
Sbjct: 45  KQVGADLEMPVARREAETLF---QERPEPG-NQYLEDALLRSYLEAHLPPKVLEEVSQEL 100

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           E  G  +L+   + L      N P    Y   G+R D +    AW  +   +  +GL   
Sbjct: 101 EGFGNRLLTK-IRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLVAE 159

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            ++R +    R   H+     L+  A       ++ +  +A ++  +  P   K+    +
Sbjct: 160 AYERRYSNWSR--VHQAVKLYLFSTASGGFNCPLAMTDGAAKVIESLGVPASLKNAFDHL 217

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSS 237
            SR+          +     G  +TE+RGG+D+A    +  +K  DG Y L G KWF S+
Sbjct: 218 TSRD---------PRKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYHLYGFKWFTSA 268

Query: 238 PMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             SD  + LA++E          G +  F +    E+   NG+  QRLK K+G R  AT 
Sbjct: 269 ADSDMALTLARIEDAEGHVKQGSGGLSLFFLRVRDEEEKLNGIQVQRLKAKLGTRQMATA 328

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           EL  +     L+         + +M  +  + + I +V+ MR  ++ +  YA +R   G 
Sbjct: 329 ELWLNGAKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSRQYALKRVAFGK 388

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKYWC 404
           +L D P+  + IA + +    A  L   +A     A++     ++    R++ P+ K + 
Sbjct: 389 LLKDHPLHMQTIARMEVQTRGAFLLLMEMARLLGLAETNMASEQDQLLLRLLVPVAKLYT 448

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTN 463
            K A A+  EAME  GG GY+E+  +    R++   SI  G+ N + LDVL  L K    
Sbjct: 449 GKQASAIAIEAMESFGGQGYMEDTGLPVIVRDTLVLSIWEGTTNVLSLDVLRSLAKSQGQ 508

Query: 464 LFEQLFSTLEQDLG-----SSGKKVITILRDSISL------------CKEDKGLARFLTE 506
           +    FST++  LG     +  +  +  ++D+                   +  AR  + 
Sbjct: 509 VMAVFFSTVQNKLGLASSSAELQPAVQFVQDAAGRLARFCQGAASEGAAPMELAARDFSY 568

Query: 507 KIALASSAAALYRAGMND 524
            +A   + A L       
Sbjct: 569 SLARIYAGALLIEHAARP 586


>gi|157694120|ref|YP_001488582.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
 gi|157682878|gb|ABV64022.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
          Length = 380

 Score =  306 bits (784), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 136/375 (36%), Gaps = 33/375 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAG 149
            ER +   + PA    +      GL    W      +      + I    L  +      
Sbjct: 29  AERDETETYDPAIFRQM---AELGLTGIPWPEEVGGIGSDYLTYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  ++  +    T    + +               P+ +        LTE   G+
Sbjct: 86  TLSAHTSLASWPIYTFGTDEQKETYLK-------------PLAEGQKVGAYALTESGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D   + +   K            +  +  ++D +I+ A  +           + +    G
Sbjct: 133 DAGGMRTTAVKAGSEYVLNGAKIFITNGGIADYYIVFAVTDQEAASRNTTAFIVEKETPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + ++K+G RS+ T E+ F +     + + N      E  KI ++ LD     ++  
Sbjct: 193 FSVGKKESKLGIRSSPTTEIRFEDCR---IHEKNRLGQEGEGFKIAMMTLDGGRNGIAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A+HYA+ R   G  +I Q  +   +AD+A  I A+  L+++ A    + 
Sbjct: 250 AVGIAQGALDAAVHYAKERKQFGKPIIQQQGIAFKLADMATAIEASRLLTYQAAWLETKG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +E+A        +K +    A  V  EA++  GG GY ++  + R+ R++    I 
Sbjct: 310 LPYGKESAM-------SKLFAGDTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 363 EGTQEIQRLVISRKL 377


>gi|326389651|ref|ZP_08211217.1| acyl-CoA dehydrogenase domain-containing protein
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325994366|gb|EGD52792.1| acyl-CoA dehydrogenase domain-containing protein
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 380

 Score =  306 bits (784), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 45/407 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           + ++    +E A       P+       GE  WD V          ++     +    + 
Sbjct: 9   QQMVRKILREFAE--KEIAPKAKEIDLTGEFPWDNV----------KKMAKADMMGIPYP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFS 180
           + +          I A      A    G ++S   + A   +    T    + +      
Sbjct: 57  KEYGGAGGDYISYIIAVEEISRACAATGVILSAHTSLACFPIFQWGTKEQKEKYLI---- 112

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
                    P+ K        LTE   GTD AA  +      D  Y L+G K F+++   
Sbjct: 113 ---------PLAKGEKLGAFALTEPNAGTDAAAQQTTAVLEGDH-YILNGSKIFITNGGK 162

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D +I+ A  +   G   +   + +    G    +++ K+G R +   EL F +    ++
Sbjct: 163 ADVYIVFAMTDKSKGTKGISAFIVEKDFPGFYIGKVEEKMGIRGSRAAELVFEDC---VV 219

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
              N+     E  KI ++ LD   + +    + +A+A       Y + R   G  +    
Sbjct: 220 PKENLLGKEGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGKFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IA++A  ++AA  L +  A       S + EAA A       K +  + A  V  
Sbjct: 280 GLQWYIAEMATKVSAARHLVYYAAWRKQNNLSYTMEAAMA-------KLFASETAMEVTT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++  GG GY ++  + R  R++    I  G+     + + + L K
Sbjct: 333 KAVQIFGGYGYTKDYPVERLMRDAKITEIYEGTSEVQKMVIASNLLK 379


>gi|312793411|ref|YP_004026334.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180551|gb|ADQ40721.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 381

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 132/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--KDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTEADAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKGYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRASSTTELIFEDCKVPKENLLGREGTGFIVAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YA+ R   G  L     ++  +AD+ ++I AA A+ +      D        
Sbjct: 255 GAYEHAVRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  + ++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDVVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|302871966|ref|YP_003840602.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574825|gb|ADL42616.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 381

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--RDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTEADAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRASSTTELIFEDCKVPKENLLGREGTGFIVAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA+ R   G  L     ++  +AD+ ++I AA A+ +      D        
Sbjct: 255 GAYEHAIRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|212640555|ref|YP_002317075.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212562035|gb|ACJ35090.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 383

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 139/368 (37%), Gaps = 31/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ I    +  ++      L   +    + +
Sbjct: 38  RPILKKMAELGLMGITVPEQYGGAGMDFTSYIIAIHEISKVSATVGVILSVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ S EY                  LTE   G+D+A++ +   +  
Sbjct: 98  LYFGTEEQKQKYVPKLASGEY-------------LGAFCLTEPGAGSDVASLKTTAIRDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D         +  +   +D +I+ A+      G   V   + +    GL   + + K+G 
Sbjct: 145 DHYVLNGSKVFITNGGEADTYIVFARTNPEEKGSKGVSAFIVEKHTPGLVIGKDEKKMGL 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI---- 336
             + TV+L F +         N+     +  KI +  LD   + ++   + +AEA     
Sbjct: 205 HGSRTVQLSFEDMRVPA---ENLLGEEGDGFKIAMANLDVGRIGIAAQSLGIAEAALEHA 261

Query: 337 -HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            +YA+ R   G  + +Q  +   +AD+A ++ AA  L +R A          +EA+ A  
Sbjct: 262 TNYAKERIQFGKPIAEQQGVAFKLADMATNVEAAKLLVYRAAFLRTNGMPCGKEASMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  K A     EA++  GG+GY E+  + R +R++    I  G+     L + 
Sbjct: 320 -----KLFASKTAMENAIEAVQIFGGNGYTEDYPVERLFRDAKVCEIYEGTSEIQRLVIS 374

Query: 456 NLLEKGTN 463
             L +G  
Sbjct: 375 KHLFRGMG 382


>gi|148222252|ref|NP_001086464.1| hypothetical protein LOC446287 [Xenopus laevis]
 gi|86577742|gb|AAI12957.1| LOC446287 protein [Xenopus laevis]
          Length = 587

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 122/555 (21%), Positives = 223/555 (40%), Gaps = 57/555 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELE----LLGEYVLSCTAQELARMANY 79
             Q    +G N +  D+LL + I  + P  +  E+        + ++      L R    
Sbjct: 11  FFQERPSLG-NQFLEDALLQSYIKRHLPPQMVSEVSQDYIRFAQRLV-EEIDSLGRDCEL 68

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  Y   G R D++    AW  +   S  +GL    ++R +    R     I+  +
Sbjct: 69  NLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVAEAYERRYSSWSR----LIQVIK 124

Query: 140 LYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +YL +            +  +A ++  +  P   ++    + SR            +   
Sbjct: 125 IYLYSPSAGLFTCPLAMTDGAAKVIESLGVPEPLQNAYNHLTSRN---------PSSFWT 175

Query: 198 IGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------- 249
            G  +TE+RGG+D+A    +   +  DG Y L G+KWF S+  SD  + L +V       
Sbjct: 176 SGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWFTSATDSDMSLTLGRVVDNHGNT 235

Query: 250 ---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  F +     +G+ NG+  QRLK K+G R   T EL         +       
Sbjct: 236 VVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALQISPEGRGV 295

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M  +  + + I +V+GMR  +  A  YA +R V G ++ + P+  + +A + ++ 
Sbjct: 296 ASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFVFGKLIKEHPLHIQTMARMEVEA 355

Query: 367 AAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             A      ++      +   +  ++    R++ P+ K +  K A AVI+E +EC GG G
Sbjct: 356 RGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAKLYTGKQALAVISEGLECFGGQG 415

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLG----- 477
           Y+E+  +    R++   +I  G+ N + LDVL  + K    +    FST ++ L      
Sbjct: 416 YMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKSNGKVLSAFFSTAQEKLDRASCV 475

Query: 478 ----SSGKKVITILRDSISLCKED--------KGLARFLTEKIALASSAAALYRAGMNDI 525
                + K  +  L   ++  +E         +  AR     +A       L      + 
Sbjct: 476 PSLSQAAKHTMKALNKLMAFTQEAGQLGGNYMELAARDFAYSLAKIYIGTLLLDHAAWEG 535

Query: 526 A---DVFLENRFLDN 537
           A   D++   R+ D 
Sbjct: 536 ASATDIYSAQRWSDQ 550


>gi|311032043|ref|ZP_07710133.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 378

 Score =  306 bits (783), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+ ++ EF      +L +    GL        +          I A           
Sbjct: 26  PFVEKMEEGEFP---REILCKMADLGLMGMTIPEEYGGAGMDFPSYIIAINELSRVSATV 82

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +   + +    T    + +  K+ S EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYVTKLASGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ ++  K  D         +  +   +D +I+ A     +G   V   + +   
Sbjct: 130 GSDAGSLKTRAVKQGDHYVLNGAKVFITNGGEADTYIVFASTNPELGTKGVSAFIVEKDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    + ++K+G   + TV+L F +    +    N+     E  KI +  LD   + ++
Sbjct: 190 PGFVIGKDEHKMGLHGSKTVQLTFEDAKVPV---ANLLGAEGEGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE     A  YA+ R   G  +  Q  +   +AD+A  +  A  L++R AN   
Sbjct: 247 AQSLGIAESAVQAATAYAKERVQFGKPIAAQQGVSFKLADMATAVEGARLLTYRAANLRA 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EA+ A       K +  + A  V  EA++  GG GY ++  + R++R++    
Sbjct: 307 LGKPCGKEASMA-------KLFASQTAMNVAIEAVQVFGGYGYTKDYPVERYFRDAKVCE 359

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+     L +   L 
Sbjct: 360 IYEGTSEIQRLVIGKHLM 377


>gi|300870661|ref|YP_003785532.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000]
 gi|300688360|gb|ADK31031.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000]
          Length = 367

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 139/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 12  PLATEVDEEERFPV--ETVKKMAEIGLMGIPIPKEYGGAGGDNLMYAMAVEELSRVCGTT 69

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 70  GVILSAHTSLGTWPILQFGTDAQKQKYVPKLASGEW-------------LGAFGLTEPNA 116

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + ++G K F+++   +D +++ A  +   G   +   + + 
Sbjct: 117 GTDAAGQQTTAVLDEATQEWVINGSKIFITNSGYADVYVIFAMTDKSQGLKGISSFIVEK 176

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 177 DTPGFTVGKKEKKLGIRGSATCELIFENAR---IPKENLLGELGKGFKIAMMTLDGGRIG 233

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     E + Y + R   G  + +    +  +A++ + + AA  L ++ A  
Sbjct: 234 IASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEAARLLVYKAAWR 293

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 294 ESNHLPYSVDAARA-------KLFASETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKI 346

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 347 TEIYEGTSEVQRMVIAGNLLK 367


>gi|212697486|ref|ZP_03305614.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675485|gb|EEB35092.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 400

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 149/380 (39%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  ++ D+    P     + +    G     +D  F         + +    +       
Sbjct: 47  PLAQKVDEEHMFPE--ETVAKMQELGFFGIPFDEEFGGQGADTLTYVLAVEEISKYCAST 104

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   A  +         K +   + S E                   LTE   
Sbjct: 105 GVVLSAHTSLCADCINKFANDEQKKKYLTPLASGE-------------KLGAFALTEPNA 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +  +   D  Y L+G K F+++   ++ +I+ A  +   G   +   + +  
Sbjct: 152 GTDASGQQTVAKLDGDE-YVLNGTKIFITNGGYAETYIVFAMTDKSKGNHGISAFIVEKG 210

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +  L+NK+G   ++T+EL F +     +   N+     +  KI +  LD   + +
Sbjct: 211 TKGFDFGTLENKMGINGSSTMELIFQDCR---IPKENLLGEEGKGFKIAMATLDGGRIGI 267

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  L      +  +A++A++I AA  L ++ A+  
Sbjct: 268 AAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARHLVYKAASLK 327

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++ S  AA A++ A        + A  V   A++ +GG GYI+E  + R  R++   
Sbjct: 328 DAGENYSVAAAMAKLKA-------SRTASYVANRAVQILGGYGYIKEYDVERMMRDAKIT 380

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+   M++ V   L +
Sbjct: 381 EIYEGTSEVMLMVVSGALLR 400


>gi|325281776|ref|YP_004254318.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324313585|gb|ADY34138.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 379

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 138/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+    +   +         + +    L  +    
Sbjct: 26  PLAAEVDEEERFPV--ETVEKMAKLGIMGIPFPVEYGGAGGDNVLYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS +         K + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCASPIYEFGNEEQRKKYLPKLCSGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  +      D  Y L+G K F+++   +  +I++A  +   G   +   + +  
Sbjct: 131 GTDASAQQTMAVAEEDH-YVLNGSKIFITNAAYAHVYIVMAMTDKSQGTRGISAFIVERD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + + K+G R +AT EL F N         N+   P E  KI +  LD   M +
Sbjct: 190 FPGFSIGKKEKKMGIRGSATCELIFENCIVPKG---NMLGKPGEGFKIAMKTLDGGRMGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E I Y + R   G  +      +  +AD+   I AA  L    A   
Sbjct: 247 ASQALGIAQGAMDETIKYVKERKQFGRSIGQFQNTQFQLADLNAKIEAARLLVRTAAWKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     S ++A A       K +  + A  V  +A++  GG GY  E  + R  R++   
Sbjct: 307 DRKIPYSVDSARA-------KLFAAETAMEVTTKAVQFHGGYGYTREYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 360 EIYEGTSEVQRMVIAAALLK 379


>gi|153837593|ref|ZP_01990260.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus
           AQ3810]
 gi|149749090|gb|EDM59901.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus
           AQ3810]
          Length = 384

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 85/406 (20%), Positives = 150/406 (36%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A   +  L    P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRAFADTAQQFS--LERLAPMAAEWDEKQNFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+     + MVA   T  V   + PK+ + E
Sbjct: 58  EHGGLGLSRLDASIVFEQLSMGCTSTTAFMTIHNMVSWMVASFATEDVRAKYCPKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D A++++   K  D      G  +   +  +D 
Sbjct: 118 W-------------LGSYCLTEPNAGSDAASLSTTAHKKGDTYVLNGGKAFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GEAGAKGVSAFVVPAQADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFIFAMKGLDGGRINIATCSVGTAQQALNQATQYMQERKQFGKSLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D   S       A     + K +   +   +  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRGDSD------ATTYCAMAKRFATDVGFQICDQALQIY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG GYI+E  + R++R+   + IL G+   M L +   L   T+  
Sbjct: 338 GGYGYIKEYPMERYFRDVRVHQILEGTNEIMRLIIARRLLSETSAL 383


>gi|332981892|ref|YP_004463333.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON]
 gi|332699570|gb|AEE96511.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON]
          Length = 385

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 138/392 (35%), Gaps = 32/392 (8%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
            AR+A+          P     D+ E  P  + +++      L        +  +     
Sbjct: 16  AARIADEKVA------PVARELDEKEEFP--YEIMKILAESDLFGVYIPEEYSGLGGGIT 67

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
            +         A        + S    + + L  T    + + P I              
Sbjct: 68  EQCLVIEELSRACAGVAVSYAASGLGCTPILLFGTEEQKQKYVPDI-------------A 114

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                    LTE   G+D++ I +   K  D        +W  +   +D +++LA     
Sbjct: 115 AGKKLAAFALTEANAGSDVSGIQTMAVKDGDYYILNGTKQWITNGGEADVYVVLAVTNRS 174

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVED 311
            G       + +    GL + + + K+G R++AT E+ F++        L     G +  
Sbjct: 175 KGSRGFSAFIVEKDTPGLSFGKKEKKLGIRASATREVIFTDCRIPKENILGKEGMGFIVA 234

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK            +V   + +L  A  YA +R+  G  +     ++  +AD+A    AA
Sbjct: 235 MKNFDRTRPGIGAQAVGIAQGALDYAASYAHQRYQFGQPISSFQAIQHMLADMATQTEAA 294

Query: 370 TALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            AL +  A   D   K  S+E++ A       K +   +A  V  +A++ +GG GY+ + 
Sbjct: 295 RALVYATARMIDAGAKDFSKESSMA-------KVFASDVAMKVTTDAVQILGGYGYMRDY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +  R++    I  G+       +   L K
Sbjct: 348 PVEKMMRDAKITQIYEGTNQIQRNIIALELIK 379


>gi|222529223|ref|YP_002573105.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456070|gb|ACM60332.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 381

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--RDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       + + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKEKYLPKI-------------AKGELIAAFALTEADAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIIEKGYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRASSTTELIFEDCKVPKENILGREGTGFIIAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA+ R   G  L     ++  +AD+ ++I AA +L +      D        
Sbjct: 255 GAYEHAIRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|299537951|ref|ZP_07051237.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298726533|gb|EFI67122.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 378

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 148/403 (36%), Gaps = 44/403 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +E+ R    N   P         ER +  EF  A    +      GL    W   + 
Sbjct: 10  EQLREMIRDFAINEVAPT------AAERDENEEFDRAIFDKM---AELGLTGIPWPEEYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A+ I    L  +       L + +  +   +    T    + +          
Sbjct: 61  GAGFDYLAYVIAVEELSRVCASTGVTLSAHTSLAGWPLYKFGTEEQKQKYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +
Sbjct: 112 ----RPMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTY 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +           + +    G    + + K+G RS+ T E+ F N         N
Sbjct: 167 IVFAVTDPEA-KHGTSAFIVEAGFEGFSVGKKEKKLGIRSSPTTEIIFDNCRVP---KEN 222

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD     ++   V +A+     A+ YA+ R   G  L     +  
Sbjct: 223 LLGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPLTANQGISF 282

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I A+  L+++ A          + +A A++MA          A +V  EA++
Sbjct: 283 KLADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAG-------DTAMSVTTEAVQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 336 VFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378


>gi|51258380|gb|AAH80048.1| LOC446287 protein [Xenopus laevis]
          Length = 636

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 124/577 (21%), Positives = 233/577 (40%), Gaps = 59/577 (10%)

Query: 5   EIYRRLAMNQVHQPSDSLFALN--QPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELE-- 59
           +  ++  ++++  P       N  Q    +G N +  D+LL + I  + P  +  E+   
Sbjct: 38  DTQQQGILDELKMPFSHAAIGNFFQERPSLG-NQFLEDALLQSYIKRHLPPQMVSEVSQD 96

Query: 60  --LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
                + ++      L R    N P+L  Y   G R D++    AW  +   S  +GL  
Sbjct: 97  YIRFAQRLV-EEIDSLGRDCELNLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVA 155

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWA 175
             ++R +    R     I+  ++YL +            +  +A ++  +  P+  ++  
Sbjct: 156 EAYERRYSSWSR----LIQVVKIYLYSPSAGLFTCPLAMTDGAAKVIESLGVPKPLQNAY 211

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWF 234
             + SR            +    G  +TE+RGG+D+A    +   +  DG Y L G+KWF
Sbjct: 212 NHLTSRN---------PSSFWTSGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWF 262

Query: 235 LSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            S+  SD  + L +V             +  F +     +G+ NG+  QRLK K+G R  
Sbjct: 263 TSATDSDMSLTLGRVVDNHGNTVVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQV 322

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T EL         +         + +M  +  + + I +V+GMR  +  A  YA +R V
Sbjct: 323 PTAELLLDGVKALQISPEGRGVASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFV 382

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITK 401
            G ++ + P+  + +A + ++   A      ++      +   +  ++    R++ P+ K
Sbjct: 383 FGKLIKEHPLHIQTMARMEVEARGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAK 442

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK- 460
            +  K A AVI+E +EC GG GY+E+  +    R++   +I  G+ N + LDVL  + K 
Sbjct: 443 LYTGKQALAVISEGLECFGGQGYMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKS 502

Query: 461 GTNLFEQLFSTLEQDLG---------SSGKKVITILRDSISLCKED--------KGLARF 503
              +    FST ++ L           + K  +  L   ++  +E         +  AR 
Sbjct: 503 NGKVLSAFFSTAQEKLDRASCVPSLSQAAKHTMKALNKLMAFTQEAGQLGGNYMELAARD 562

Query: 504 LTEKIALASSAAALYRAGMNDIA---DVFLENRFLDN 537
               +A       L      + A   D++   R+ D 
Sbjct: 563 FAYSLAKIYIGTLLLDHAAWEGASATDIYSAQRWSDQ 599


>gi|309388390|gb|ADO76270.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228]
          Length = 379

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 142/376 (37%), Gaps = 34/376 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
               D+    P     + +     +    +   ++         + A      A    G 
Sbjct: 28  AAEIDETCEFP--QENVNKMAAADMLGIPFPEKYDGSGGDTLSYVLAIEELSKACATHGI 85

Query: 151 LMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++S   +  A  +         + +               P+ +       GLTE   GT
Sbjct: 86  ILSAHTSLGAHPIYQFGNEEQKEKYLK-------------PLARGDKLGAFGLTEPDAGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D +A  +  +   D  Y L+G K F+++  ++D FI+ A  +   G   +   + +    
Sbjct: 133 DASAQKTTAELDGDE-YVLNGSKIFITNAGVADTFIVFAMTDKSKGTRGISAFIVEKEYP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
           G    + +NK+G  ++ T EL F +         N+        KI +       +  A 
Sbjct: 192 GFSVGKKENKLGINASDTRELIFKDCRVP---KENLLGKEGMGFKIAMATLDGGRIGVAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  +     ++  IA++A  + AA  L ++ A + D 
Sbjct: 249 QALGIAQRALDETVQYVKERQQFGRAISKFQGLQWEIAEMATKVEAARLLVYKAAKTKDS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S+EAA A       KY+  + A AV  +A++  GG GYI+E  + R  R++    I
Sbjct: 309 GQRFSKEAAMA-------KYYASEAAFAVANKAIQLHGGYGYIKEYPVERLLRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 362 YEGTTEVQKMVIAGSL 377


>gi|169826558|ref|YP_001696716.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168991046|gb|ACA38586.1| Acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 378

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 148/403 (36%), Gaps = 44/403 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +E+ R    N   P         E++D+  F         +    GL    W   + 
Sbjct: 10  EQLREMIRDFAINEVAPTAAERDEN-EQFDRAIF--------DKMAELGLTGIPWPEEYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A+ I    L  +       L + +  +   +    T    + +          
Sbjct: 61  GAGFDYLAYVIAVEELSRVCASTGVTLSAHTSLAGWPLYKFGTEEQKQKYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                PM +       GLTE   G+D   + +  ++  D  Y L+G K F+++  ++D +
Sbjct: 112 ----RPMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTY 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +           + +    G    + + K+G RS+ T E+ F N         N
Sbjct: 167 IVFAVTDPEA-KNGTSAFIVEAGFEGFSVGKKEKKLGIRSSPTTEIIFDNCRVP---KEN 222

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +  LD     ++   V +A+     A+ YA+ R   G  +     +  
Sbjct: 223 LLGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGVSF 282

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I A+  L+++ A          + +A A++MA          A +V  EA++
Sbjct: 283 KLADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAG-------DTAMSVTTEAVQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY ++  + R  R++    I  G+     L +  +L K
Sbjct: 336 VFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378


>gi|312135048|ref|YP_004002386.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor owensensis OL]
 gi|311775099|gb|ADQ04586.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor owensensis OL]
          Length = 381

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 133/371 (35%), Gaps = 24/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           ++DK    P    +L    +  L      + +                            
Sbjct: 30  KYDKEGIFP--RDILDLLAYTELTGVYIPKEYGGFGGGVMEMCLVVEELSRNCAGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  + L       K + PKI              K  +     LTE   G+D++
Sbjct: 88  AATALGAYPIILYGKEEQKKKYLPKI-------------AKGELIAAFALTEADAGSDVS 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +I +  +K  D         W  +   +D +++ A  +   G   +   + +    G   
Sbjct: 135 SIKTTAEKKGDYYILNGSKHWITNGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYC 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G R+++T EL F +        L    TG +  MK         A M+V   +
Sbjct: 195 GKKEDKMGIRASSTTELIFEDCKVHKENLLGREGTGFIVAMKTFDRTRPGVAAMAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA+ R   G  L     ++  +AD+ ++I AA A+ +      D        
Sbjct: 255 GAYEHAIRYAKERVQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSG------ 308

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A      +   K +   +A  V  +A++ +GG+GY+++  + +  R++    I  G+   
Sbjct: 309 AKDFSKESSACKVFASDVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGANQI 368

Query: 450 MVLDVLNLLEK 460
               + + + K
Sbjct: 369 QRNIIASEIIK 379


>gi|218961565|ref|YP_001741340.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans]
 gi|167730222|emb|CAO81134.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans]
          Length = 381

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 80/402 (19%), Positives = 145/402 (36%), Gaps = 28/402 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +Y L+    E+  +A     +     P  E++D+    P    ++       L   +   
Sbjct: 2   DYFLTEEQLEMQEIARRIAEE--KIRPVSEKYDEEGIFP--WDIVEVMKQSDLFAILVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K A             +        +      + +  +    + +  +I + E
Sbjct: 58  EYGGISGKVADLAVVTEELCAVDVGISLAFGATGLGMYPILIAGSEEQKQKYLAQIAAGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D  AI +  QK  D        +W  +   +  
Sbjct: 118 Q-------------LAAFALTEANAGSDAGAIETTAQKEGDYYLLNGTKQWITNGGEAGI 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           + + A  +   G       L +    G  + + +NK+G R++AT EL F +        +
Sbjct: 165 YCVFAMTDKTKGARGCSCFLVEKGTPGFNFGKKENKMGIRASATRELIFEDCKVPAENLI 224

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               TG +  MK+           SV   R +   AI Y+R R   G  +     ++  +
Sbjct: 225 GREGTGFITAMKVFDKSRPMVGAQSVGVARGAFEVAIKYSRERQQFGKPISSFQGIQFML 284

Query: 360 ADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           AD+A  I AA AL  + A   D   K+ S+E+A         KY+   +A  V  +A++ 
Sbjct: 285 ADMATQIEAARALVMQTARMIDSGAKNYSKESAM-------CKYFASDVAMKVTTDAVQI 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG GY++E  + +  R++    I  G+       V   L K
Sbjct: 338 LGGYGYMKEYPVEKMMRDAKILQIYEGTNQIQRNIVAANLLK 379


>gi|302387339|ref|YP_003823161.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1]
 gi|302197967|gb|ADL05538.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1]
          Length = 380

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 32/375 (8%)

Query: 95  DKVE---FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
           D+VE     P    +L +    G       + +         + +    +  ++ + + +
Sbjct: 28  DEVEESGTFPE--EILYKMGKAGFFGIKTPKEYGGSGGDARCYVLVMEEIARVSGVASIY 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + SP+  S   + L  T    +++ P + S              +  +   LTE   G+D
Sbjct: 86  VSSPNSLSGGPLLLSGTEEQKRNYLPSLISG-------------NKKLCFALTEPGAGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPN 268
              + S   K  D  Y L+G K F++ +P++D  ++ A+ +   G   +   + D  +  
Sbjct: 133 AGGMQSTAVKDGD-SYILNGRKTFITMAPLADYAVIYAKTDMTKGTKGISAFIVDMKNTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   + ++K+G    AT ++   N        L     G +  MK L    +  A  S+
Sbjct: 192 GISCGKPEHKMGVIGCATSDIIMDNARIPAENLLGEEGMGFINAMKTLDTGRMGVAAQSI 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EAI YA+ R   G  + D   +   IAD+A  + AA  L ++ A   D  + 
Sbjct: 252 GVAQGALDEAIKYAKERKQFGKRIGDFQAIAFMIADMATKLEAAKQLVYKTAYLMDTHQP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S EA+ A       KY+  ++   + ++A++  GG G+I++  I R YR+    +I  G
Sbjct: 312 ASMEASMA-------KYYASEVCNEIASKALQIHGGYGFIKDYKIERMYRDCRVFTIYEG 364

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L K
Sbjct: 365 TSQIQQLVISGKLLK 379


>gi|225027698|ref|ZP_03716890.1| hypothetical protein EUBHAL_01957 [Eubacterium hallii DSM 3353]
 gi|224955012|gb|EEG36221.1| hypothetical protein EUBHAL_01957 [Eubacterium hallii DSM 3353]
          Length = 380

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 136/398 (34%), Gaps = 38/398 (9%)

Query: 75  RMANYNTPQLHA-YG-------PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           R    +   L   +        P     D+ E  P     ++     GL    +   +  
Sbjct: 4   RQDEEHQDILEMVHDFAVNEVKPLAAEIDRTEEFPM--KNVKMMAEMGLMGIPFPEEYGG 61

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 A+      L          L + +   A+ +    +    + + PK+ S E+  
Sbjct: 62  AGMDTLAYIQTVEELSKYCASTGVILSAHTSLCATPIYQFGSEEQKQKYLPKLCSGEW-- 119

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           LTE   GTD +   +      D         +  ++ ++D F +
Sbjct: 120 -----------IGAFALTEPNAGTDASGQQTVAVDAGDHWVLNGSKIFITNAGVADVFFV 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           LA  +   G   +   + +    G    + ++K+G R+++T EL F +        +   
Sbjct: 169 LAMTDKSQGTKGISAFIVEKGYKGFSIGKHEDKLGIRASSTCELIFEDCIVPKENLVGEL 228

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIA 360
               +    ++ LD   + ++   + +AE        Y   R   G  +      +  +A
Sbjct: 229 GKGFKY--AMMTLDGGRVGIAAQALGIAEGALEETTKYITERKQFGRRISQFQNTQFEMA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +     AA  L ++ A + D+ +  S +AA A+++A        + A  V    ++  G
Sbjct: 287 QMRAQTEAAKLLVYQAACAKDDHEPFSHKAAMAKLVAA-------RNAMDVTTRCLQLYG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY ++  I R  R++    I  G+    ++ +   +
Sbjct: 340 GYGYTKDYPIERMMRDAKITEIYEGTSEVQMMVISGWM 377


>gi|319650927|ref|ZP_08005062.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397283|gb|EFV77986.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 402

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 140/364 (38%), Gaps = 35/364 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER ++  F      +  +    GL    W   +  +     A+ I    L  +      
Sbjct: 29  AERDEEERFD---REIFDKMAELGLTGIPWPEEYGGIGSDYLAYCIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    +    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPIFKFGSEGQKQKYLK-------------PMAQGEKIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  +   D  Y L+G K F+++  ++D +++ A  +           + +    
Sbjct: 133 DAGGMRTTARLEGDH-YVLNGSKIFITNGGIADIYVVFALTDPASKHKGTTAFIVESGFE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F      +    NV     E  KI ++ LD     ++ 
Sbjct: 192 GFSVGKKEKKLGIRSSPTTEIIFEECKVPV---ENVLGNVGEGFKIAMMTLDGGRNGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ YA+ R   G  +  Q  +   +AD+A  I A+  L+++ A    E
Sbjct: 249 QAVGIAQGALDASVEYAKERQQFGKPIAAQQGIGFKLADMATSIEASRLLTYQAAWLESE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E+A ++++A          A  V  +A++  GG GY ++  + R  R++    I
Sbjct: 309 GLPYGKESAMSKLLAG-------DTAMKVTTDAVQIFGGYGYTKDYPVERFMRDAKITQI 361

Query: 443 LLGS 446
             G+
Sbjct: 362 YEGT 365


>gi|298242757|ref|ZP_06966564.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555811|gb|EFH89675.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 384

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 136/381 (35%), Gaps = 30/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P    +        +    +   +  +   +     A           
Sbjct: 27  PRAAEIDHSGEFP--WDMKELLASHDILAMPFPEEYGGIGASELAISMAVEELSRCCATT 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +++     +  + L       + + P++ S E+                 GLTE   G
Sbjct: 85  GLILAVQQLGSMPILLAGNDEQKRKYFPQLASGEW-------------LAAFGLTEAGSG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +   +  D        ++  +  ++    + A  + + G   +   + +    
Sbjct: 132 SDAAAMQTFAVRKGDKYTLNGSKRFITNGGLAQVNTIFAITDPQAGTRGISAFIVEKDFP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           G    R+++K+G + + T EL F N    +    N+  G  E  KI +  LD   + +  
Sbjct: 192 GFSVGRIEDKMGIKGSQTAELIFENCEVPV---ENLLGGEGEGFKIAMRTLDRTRIGIGA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     A+ YA++R      + +   ++  +AD+A  + AA  L +  +   D+
Sbjct: 249 QALGIAQGALDLAVAYAKQRVQFKKPIAENQGIQFMLADMATKVEAARLLVYHASELVDD 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +          + + K +    A  V  +A++ +GG GY++E    R  R++    I
Sbjct: 309 GDEQ------FSKYSSMAKMFASDAAMDVTNDAIQVLGGYGYMKEYPAERMLRDAKITQI 362

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+     L +   L    N
Sbjct: 363 YEGTNQIQRLVIARALLSERN 383


>gi|309389794|gb|ADO77674.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228]
          Length = 379

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 141/376 (37%), Gaps = 34/376 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
               D+    P     + +     +    +   ++         + A      A    G 
Sbjct: 28  AAEIDETCEFP--RENVEKMAAADMLGIPFPEKYDGSGGDTLSYVLAIEELSKACATHGI 85

Query: 151 LMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++S   +  A  +         + +               P+ +       GLTE   GT
Sbjct: 86  ILSAHTSLGAHPIYQFGNEEQKEKYLK-------------PLARGDKLGAFGLTEPDAGT 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D +A  +  +   D  Y L+G K F+++   +D FI+ A  +   G   +   + +    
Sbjct: 133 DASAQKTTAELDGDE-YILNGSKIFITNAGEADTFIVFAMTDKSKGTRGISAFIVEREYP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
           G    + +NK+G  ++ T EL F +         N+        KI +       +  A 
Sbjct: 192 GFSVGKKENKLGINASDTRELIFKDCRVP---KENLLGKEGMGFKIAMATLDGGRIGVAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  +     ++  IA++A  + AA  L ++ A + D 
Sbjct: 249 QALGIAQRALDETVQYVKERQQFGRAISKFQGLQWEIAEMATKVEAARLLVYKAAKTKDS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S+EAA A       KY+  + A AV  +A++  GG GYI+E  + R  R++    I
Sbjct: 309 GQRYSKEAAMA-------KYYASEAAFAVANKAIQLHGGYGYIKEYPVERLLRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 362 YEGTTEVQKMVIAGSL 377


>gi|226311186|ref|YP_002771080.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226094134|dbj|BAH42576.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 603

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 113/503 (22%), Positives = 221/503 (43%), Gaps = 36/503 (7%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTP 82
           P +  G N + +D  L  L+  +          ++L  LG  V     +  A       P
Sbjct: 20  PRMPQGENFFKADPNLNYLLERYLPASMHEWAKQQLSWLGAQVAGPIDERAAYTDREGKP 79

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  Y   GE   ++  +  +   +      G+   ++ +    + RK  +       YL
Sbjct: 80  RLRKYNRLGEDISEIITNEGYKETVAEVYGAGIVSYLY-QDIPELGRKAPYSYSFFMGYL 138

Query: 143 MAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           ++Q E G       S+++A ++    +    + +   + SR+         +        
Sbjct: 139 VSQSEPGFYCPVTLSMSAAYLLDRYGSEEQKEQYLTGLTSRD---------RTRLYEGAT 189

Query: 201 GLTEKRGGTDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV----- 253
            LTE++GG+D+ A  +  + ++   G+Y L+G K+F S+  +    +LA+++        
Sbjct: 190 WLTERQGGSDVGANLTVAEPVAGRPGVYRLTGEKFFASNAGAFVATVLARIDEEKPGTKG 249

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G FLVP +  D   N +  +RLK K+G  +  + E+  +   G+L+G+       + + 
Sbjct: 250 LGLFLVPWVKPDNERNHIQVRRLKEKLGVNAVPSAEILLNGAEGYLIGEPQNGFKYMAEA 309

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  + +AI S+  MR +  EA +YA +R   G  +   P++K  +  + LD   +T  
Sbjct: 310 LNLSRICNAIASIGIMRRAFYEARNYAEQRRAFGKPIDQYPMVKEMLVSLLLDTEVSTGA 369

Query: 373 SFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            F +   +D  +S S   E+ A AR++ P+ KY   + A      A+E  GG+GYIEE  
Sbjct: 370 VFDMIAVYDRLQSHSVSKEDNALARLLIPLLKYRTGEEAVKSTHTAIEIHGGNGYIEEYV 429

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS----SGKKVIT 485
             R  R++   ++  G+ N + LD+L +++K  N  E     L + +        +    
Sbjct: 430 TPRLLRDAQVLTVWEGTSNILALDILRVMQKE-NSHEVFSRMLRERIAGWKHVFSQPYAE 488

Query: 486 ILRDSISLCKEDKGLARFLTEKI 508
           ++R  +++ +E+     +L ++I
Sbjct: 489 LIRTELAILEENIA---YLMQQI 508


>gi|299136480|ref|ZP_07029663.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298600995|gb|EFI57150.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 387

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 156/380 (41%), Gaps = 29/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD+    P  HA++++    GL   I+             + +    L  +    
Sbjct: 31  PHVSEWDEKSEFP--HAVVKKLGEMGLMGVIFPEELGGSGMGYVEYVLAIEELSRVDGSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +    + + L       K W PK+ S E+                 GLTE   
Sbjct: 89  GIIVASHNSLCTNHLMLGGNDEQRKRWIPKLASGEW-------------LGSWGLTEPGS 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFLVPRLLEDG 265
           G+D   + +   K+ DG + L+G K F+++   +D  ++LA  +        +   L + 
Sbjct: 136 GSDAGGMRTTAMKV-DGGWLLNGSKTFITNGTYADCALVLAVTDKEKSTHGGISAFLVEK 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G    + +NK+G R++ T EL F N        +  +  G  + M++L    +  A 
Sbjct: 195 GTKGFRPGKKENKLGLRASDTAELIFENCLIPEENIVGKLGEGFKDAMRVLDGGRISIAA 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S+   R +L  A+ YA++R   G  + +   ++  +AD+A  + AA  L+ R A + D 
Sbjct: 255 LSLGMARGALDAAMKYAQQRRQFGKAISEFQAIQFKLADMATQLDAAWLLTMRAARTKDA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EAA A       K +  + A  +  E ++  GG G+I++    + YR+    +I
Sbjct: 315 GQKVTMEAAMA-------KLYASEAACRICDEGVQIHGGYGFIKDYPAEKFYRDVKLCTI 367

Query: 443 LLGSGNAMVLDVLNLLEKGT 462
             G+     + +   L KG 
Sbjct: 368 GEGTSEIQRMVIARELLKGR 387


>gi|257462359|ref|ZP_05626774.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp.
           D12]
 gi|317060022|ref|ZP_07924507.1| acyl-COA dehydrogenase [Fusobacterium sp. D12]
 gi|313685698|gb|EFS22533.1| acyl-COA dehydrogenase [Fusobacterium sp. D12]
          Length = 637

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 146/374 (39%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     +++    G+    + + +    +       A           
Sbjct: 26  PIAFELDQDNKFPE--EAIKKFAKMGMMGLPYPKEYGGAGKDILSYAIAVEELSRVDGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+  +  +A   T    + +               P+ K       GLTE   
Sbjct: 84  GVILSAHVSLGTFPIAAFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      D  Y L+G K F+++ P +D +I+ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAVLEGDH-YILNGEKIFITNAPYADIYIVFAVTTPDIGTRGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T +L F+N         N+     +   I +  LD   + +
Sbjct: 190 WEGFTFGDHYDKLGIRSSSTAQLIFNNVKVP---KENLLGKEGKGFNIAMATLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     EA++YA+ R   G  +  Q  +   +AD+A  + AA  L +  A   
Sbjct: 247 ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLADMATKLRAARFLVYSAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +    E+A A+        +   +A  ++ +A++  GG+GY++   + R YR++   
Sbjct: 307 EHHEPYGMESAMAKQ-------YASDVALEIVNDALQIHGGAGYLKGMPVERFYRDAKIC 359

Query: 441 SILLGSGNAMVLDV 454
           +I  G+     + +
Sbjct: 360 TIYEGTNEIQRVVI 373


>gi|226950713|ref|YP_002805804.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
 gi|226841227|gb|ACO83893.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 377

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 154/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L  V+ G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVNKGFITAMKTLSVGRIGVASQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +A++   + AA  L +  A   D  
Sbjct: 248 ALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSEVQQMVIASNLLK 377


>gi|153939781|ref|YP_001392633.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152935677|gb|ABS41175.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
          Length = 377

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 154/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L  V+ G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVNKGFITAMKTLSVGRIGVAAQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +A++   + AA  L +  A   D  
Sbjct: 248 ALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSEVQQMVIASNLLK 377


>gi|324997693|ref|ZP_08118805.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 982

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 148/567 (26%), Positives = 238/567 (41%), Gaps = 67/567 (11%)

Query: 28  PPLFIG---MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANY 79
           P        +N    D  L  ++    +   ++     L+ +G          LAR A+ 
Sbjct: 6   PTPLREELSVNVADRDPALRPMLDRVLAPADRDRAGPLLDAMGAAAGG-EVDRLARTADR 64

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAA 138
           + P+   + P GER D++EFHPA+  L   + H  GL              +  H ++ A
Sbjct: 65  HPPRHVPFAPSGERIDEIEFHPAYDGLAEVAFHRFGLAAMSHRPGVNGWPGRTPHVVKYA 124

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             YL  Q E G     S+T ++   L               S        +    T+   
Sbjct: 125 LSYLFVQSEFGIACPLSMTDSAARILRLFDAGRFAAEIDALS--------STDPATAATG 176

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------R 252
            + +TE  GGTD+    ++     D  + L+G KWF S+  +D  + LA+V G       
Sbjct: 177 AMFMTEIDGGTDVGRTATEATDHGDH-WTLTGRKWFCSNVTADVVLTLARVPGQGEGTRG 235

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G FLVPR   DGS N +   RLK+K+G RS A+ E+     +   +G+L+     + +M
Sbjct: 236 LGMFLVPRTRPDGSRNAVRVDRLKDKLGTRSMASGEVTLEGAWAQPVGELSRGFLQMAEM 295

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  L +A+ S + MR ++ EA+ + R R VSG  L D+P+M+  +  + LD  A+ AL
Sbjct: 296 VNVSRLSNAMRSAALMRRAVREAVDHTRERVVSGTALFDKPLMRATLLPLLLDAEASLAL 355

Query: 373 SFRLANSFDEAK-----------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               A+  D A            +     +  RI+ P+ KY  CK A  V  E ME  GG
Sbjct: 356 VLECADRLDAADAVTFGEVTGDAADPAARSLIRILTPLAKYTVCKRARFVTGETMEIRGG 415

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +GYIE+    R  R++   SI  GS N + LD+L  L K             + L ++ +
Sbjct: 416 NGYIEDFVDPRLLRDAHLGSIWEGSSNVIALDILRCLRKEGTH---------RLLATTYR 466

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIA-LASSAAALY------------RAGMNDIADV 528
             +  +R  ++      G AR L E+ + LA+ A  L             R    D+A+ 
Sbjct: 467 ARLDAVRHPLTD-----GAARRLGERWSRLAADADRLLGSPAGEQEIGIARWA-GDVAET 520

Query: 529 FLENRFLDNCHSTHCMLHGRFNAAHII 555
            +    L+        LH   +   ++
Sbjct: 521 LMATLLLEQAEH---RLHADGDHRSLL 544


>gi|307265587|ref|ZP_07547141.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919385|gb|EFN49605.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 380

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 141/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D     P W  + + +  D +    + + +          I A      A    
Sbjct: 26  PKAKEIDLTGEFP-WDNVKKIAKAD-MMGIPYPKEYGGAGGDYISYIIAVEEISRACAAT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   + A   +    T    + +               P+ K        LTE   
Sbjct: 84  GVILSAHTSLACFPIFQWGTKEQKEKYLI-------------PLAKGEKLGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD AA  +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDAAAQQTTAVLEGDH-YILNGSKIFITNGGKADVYIVFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    +++ K+G R +   EL F +    ++   N+     E  KI ++ LD   + +
Sbjct: 190 FPGFYIGKVEEKMGIRGSRAAELVFEDC---VVPKENLLGKEGEGFKIAMVTLDGGRIGI 246

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               + +A+A       Y + R   G  +     ++  IA++A   +AA  L +  A   
Sbjct: 247 GAQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAEMATKASAARHLVYYAAWRK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               S + EAA A       K +  + A  V  +A++  GG GY ++  + R  R++   
Sbjct: 307 QNNLSYTMEAAMA-------KLFASETAMEVTTKAVQIFGGYGYTKDYPVERLMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 360 EIYEGTSEVQKMVIALNLLK 379


>gi|28900477|ref|NP_800132.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365630|ref|ZP_05778151.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260877430|ref|ZP_05889785.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260898911|ref|ZP_05907352.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|260901255|ref|ZP_05909650.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|28808857|dbj|BAC61965.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089187|gb|EFO38882.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|308090576|gb|EFO40271.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308106793|gb|EFO44333.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308111450|gb|EFO48990.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 384

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 85/406 (20%), Positives = 151/406 (37%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A   +  L    P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRAFADTAQQFS--LERLAPMAAEWDEKQIFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +           M        M+     + MVA   T  V   + PK+ + E
Sbjct: 58  AHGGLGLSRLDASIVFEQLSMGCTSTTAFMTIHNMVSWMVASFATEDVGAKYCPKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D A++++   K  D      G  +   +  +D 
Sbjct: 118 W-------------LGSYCLTEPNAGSDAASLSTTAHKKGDTYVLNGGKAFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GEAGAKGVSAFVVPAQADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHLL 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFIFAMKGLDGGRINIATCSVGTAQQALNQATQYMQERKQFGKSLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D   S       A     + K +   +   +  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRGDSD------ATTYCAMAKRFATDIGFQICDQALQIY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG GYI+E  + R++R+   + IL G+   M L +   L   T+  
Sbjct: 338 GGYGYIKEYPMERYFRDVRVHQILEGTNEIMRLIIARRLLSETSAL 383


>gi|237796728|ref|YP_002864280.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|229261133|gb|ACQ52166.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 377

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 154/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L  V+ G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVNKGFITAMKTLSVGRIGVASQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +AD+   + AA  L +  A   D  
Sbjct: 248 AIGIAQAAVDEAVKYAKQRKQFNRPIAKFQGIQFKLADMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAEAAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSQVQQMVIASNLLK 377


>gi|239624683|ref|ZP_04667714.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521069|gb|EEQ60935.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 377

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 144/378 (38%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +P    L R+ I  G H  +  R +                +      A
Sbjct: 23  PLAAQIDETGEYPE--ELRRKIIDCGFHAIVIPREYGGCGGDTVAATIVTEEFTRVDASA 80

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              + P+  S   + +       + +                M +  +     +TE   G
Sbjct: 81  STQLMPNSLSGGALMMFGNEAQKQKYLRG-------------MAEGKLIGAFAITEPGAG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           +D AAIT+  +K  D  Y L+G K F+++    D   + A+ +    G   +   + + +
Sbjct: 128 SDTAAITTTAEKDGD-YYILNGRKCFITNGPCCDFVTVFAKTDVNARGVKGISAFIVESA 186

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIM-- 323
             G     ++NK+G   + T +L F N         N+  G  +  KI +  LDS  +  
Sbjct: 187 WEGFSTGAVENKMGMHGSPTCDLIFENVRVP---KENLLGGEGQGFKICMATLDSGRITV 243

Query: 324 ---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +   + +L EA+ Y + R   G  +      +  IAD+A  +     L +  A   
Sbjct: 244 ATQGLGIAQGALDEAVKYVKERVQFGKPIAKLQNTQFEIADMATRVECGRQLVYNAARLK 303

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S+ AA A       KY+C  +   +   +++  GG GY+++  I R +R++   
Sbjct: 304 DAGQPYSKNAAMA-------KYYCGDLCNNIAYRSLQLHGGYGYMKDYPIERMFRDARLV 356

Query: 441 SILLGSGNAMVLDVLNLL 458
           +I  G+     + + N +
Sbjct: 357 AIYEGTSEIQRVVIANHI 374


>gi|255524923|ref|ZP_05391871.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|255511401|gb|EET87693.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
          Length = 634

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 148/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P+   ++++    G+    + + +        ++ I    L  +       L +
Sbjct: 32  DQENKFPS--EVIKKLADMGMLGIPYAKQYGGAGLDVISYAIAVEELSRVDGGTGVILSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +A   T    + +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGTYPIAAYGTEEQKQKYLI-------------PLAKGEKLGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +I+ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEGD-YYILNGEKIFITNGGEADTYIIFAITTPNIGTHGISAFIVEKGWEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     E  KI +  LD   + ++   + 
Sbjct: 196 GQHYDKMGIRSSATAELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q  +   +AD+A  + +A  L +  A   +  +  
Sbjct: 253 IAQGAYENALEYSKERIQFGKPICRQQAIAFKLADMATKLRSARLLIYSAAELKENHEHY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EAA A+        +   +   ++ +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 NMEAAMAKQ-------YASDVCLEIVNDALQIFGGSGYLKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   +
Sbjct: 366 NEIQRVVIAASI 377


>gi|187776796|ref|ZP_02993269.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC
           15579]
 gi|187775455|gb|EDU39257.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC
           15579]
          Length = 377

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 152/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L     G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELNKGFITAMKTLSVGRIGVAAQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +A++   + AA  L +  A   D  
Sbjct: 248 ALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSEVQQMVIASNLLK 377


>gi|225374494|ref|ZP_03751715.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM
           16841]
 gi|225213732|gb|EEG96086.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM
           16841]
          Length = 637

 Score =  304 bits (778), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 157/418 (37%), Gaps = 34/418 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WDK  + PA    ++     G     + + +  +         A           
Sbjct: 26  PYAFQWDKENYFPA--EQVKMMAQKGWLGIPFPKEYGGMGLDALSYAIAVEELSRTDGGF 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+     +    +    + +               P  K       GLTE   
Sbjct: 84  GVILSAHVSLGSWPIYAFGSEEQKQKYL-------------VPCAKGEKLAAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      D  Y L+G K F+++   +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAVLEGDH-YLLNGEKIFITNGGEADTYVVFAVTTPDIGTRGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS+AT +L F++         N+     +  KI +  LD   + +
Sbjct: 190 WKGFEFGDHYDKLGIRSSATRQLIFNDVKVP---KENLLGKEGQGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A+     A+ YA+ R      +  Q  +   IAD+A  I  A  L +  A   
Sbjct: 247 ASQALGIAQGAYESAVEYAKDRIQFDKPVAFQQGISFKIADMATKIRCARFLVYSAAERK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +E +    EAA A++       +   +A  V  +A++  GG+GY++   + R YR++   
Sbjct: 307 EEHEPYGMEAAMAKM-------YASDIALEVCNDAVQIYGGAGYLKGTDVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +I  G+     + +   +          +   ++    +G +   IL++  +  K  +
Sbjct: 360 TIYEGTNEIQRVVIAANILGKEPKSAAAYGMPKKKQPVTGARKRMILKEGTAAEKVAQ 417


>gi|328470429|gb|EGF41340.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 384

 Score =  304 bits (778), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 84/406 (20%), Positives = 149/406 (36%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A   +  L    P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRAFADTAQQFS--LERLAPMAAEWDEKQNFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +           M        M+     + MVA   T  V   + PK+ + E
Sbjct: 58  AHGGLGLSRLDASIVFEQLSMGCTSTTAFMTIHNMVSWMVASFATEDVRAKYCPKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D A++T+   K  +      G  +   +  +D 
Sbjct: 118 W-------------LGSYCLTEPNAGSDAASLTTTASKKGNTYVLNGGKAFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GEAGAKGVSAFVVPAQDDGISYGRKEPKMGWNSQPTRAVTFDNVVIPASHLL 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  MK L    ++ A  SV   + +L +A  Y   R   G  L     ++  +
Sbjct: 224 GEEGQGFIFAMKGLDGGRINIATCSVGTAQQALNQATQYMLERKQFGKSLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D           A     + K +   +   +  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRGDPD------ATTYCAMAKRFATDVGFQICDQALQIY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG GYI+E  + R++R+   + IL G+   M L +   L   T+  
Sbjct: 338 GGYGYIKEYPMERYFRDVRVHQILEGTNEIMRLIIARRLLSETSAL 383


>gi|253583423|ref|ZP_04860621.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251833995|gb|EES62558.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 636

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 147/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     +++    G+  + + + +            A           G ++S 
Sbjct: 32  DKENEFPT--EAVKKLGEMGILGTPFPKEYGGAGLDMLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAYGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   ++ +I+ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEGD-YYILNGGKIFITNADKAETYIVFAVTTPDIGTRGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
               +K+G RS++T EL F+N         N+     E  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKMGIRSSSTAELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIASQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q V+   +AD+A  + AA  L +  A   +  ++ 
Sbjct: 253 IAQGAFENALEYAKEREQFGKPIAFQQVISFKLADMATKLRAARFLVYSAAELKENHENY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E+A A+        +   +   ++ EA++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 AMESAMAKQ-------YASDVCLEIVNEALQIFGGTGYLKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + L
Sbjct: 366 NEIQRVVIASHL 377


>gi|148381231|ref|YP_001255772.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153930801|ref|YP_001385606.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935189|ref|YP_001389012.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|168179065|ref|ZP_02613729.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|170757106|ref|YP_001782911.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|170758551|ref|YP_001788604.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|148290715|emb|CAL84846.1| putative acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC
           3502]
 gi|152926845|gb|ABS32345.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931103|gb|ABS36602.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|169122318|gb|ACA46154.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|169405540|gb|ACA53951.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|182670268|gb|EDT82244.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|322807598|emb|CBZ05173.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 377

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 154/377 (40%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD  I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L  V+ G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVNKGFITAMKTLSVGRIGVASQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +A++   + AA  L +  A   D  
Sbjct: 248 ALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSEVQQMVIASNLLK 377


>gi|86563383|ref|NP_001033379.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis
           elegans]
 gi|74832016|emb|CAJ30236.1| C. elegans protein Y45F3A.3b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 608

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 126/535 (23%), Positives = 219/535 (40%), Gaps = 49/535 (9%)

Query: 34  MNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
            N Y  D +L   +           V  +L   G+ + S   + L R A    P+L    
Sbjct: 34  HNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQD 92

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G+R DK+     WH L +    +G+    ++ S +P VR+     + A+L+L +    
Sbjct: 93  AWGKRVDKLIVCNEWHKLKQICAEEGVISIGYEDSVDPFVRR---IHQVAKLFLFSPSAG 149

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 ++T  ++  L +       +     + E     ++     +   G  +TEK+GG
Sbjct: 150 LVSCPMAMTDGAVKTLTS----LNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGG 205

Query: 209 TDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRV--GCFLVPRLL 262
           +D+A    +   +I    Y L G+KWF S+  +D  + LA++   +G    G   +   L
Sbjct: 206 SDVAGGCDTYAVQIDKDTYRLHGYKWFSSAVDADVALTLARIVDSDGNALEGSRGLSLFL 265

Query: 263 -----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                E G+ NG+   RLKNK+G +   T EL         +GD       + +M  +  
Sbjct: 266 LKIRDESGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGDQGRGVAGISNMLNITR 325

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +A+ S+  MR  ++ A  Y+ +R V G      P+    +A + +D   +  L F  A
Sbjct: 326 IHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAA 385

Query: 378 NSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 +  KS   EA   R++ P+ K +  K A  +++E +EC GG GY+E+  +    
Sbjct: 386 RLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLL 445

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS----------SGKKVI 484
           R++    I  G+ N + LDVL +     N+       +EQ LG+          S + V 
Sbjct: 446 RDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLGNTKTEDEKLKKSKEAVE 505

Query: 485 TILRDSISLC-----------KEDKGLARFLTEKIALASSAAALYRAGMN-DIAD 527
           + L+    L                 +AR +   IA   S A L     +  +A+
Sbjct: 506 SALKQLQKLLVKASDSAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVAN 560


>gi|325525345|gb|EGD03187.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 446

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 217/464 (46%), Gaps = 37/464 (7%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVL 66
           MN   +P  +  +    P   G+N +++D  L AL+         + +  +L  LG  V 
Sbjct: 1   MNDTARPPAAGAS--NIPDSRGVNFFTADPDLGALLKLHLGDAQYAELEPQLRALGARV- 57

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFE 125
           S      A  A+ + P L      GE   +++  PA+ AL R +  + GL          
Sbjct: 58  SDELDAWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHRSDAV 117

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREY 183
           P        ++ A  +L  Q E G     S+T +    L     P +   + PK+ SR++
Sbjct: 118 PP------LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPDLVAHYLPKLASRDF 171

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPM 239
           D   +  M          +TE+  G+D+  I ++  +      + ++ L G KWF S+  
Sbjct: 172 DTLYQGAMF---------MTEQAAGSDVGRIATRAARDTDAQGNAVWRLYGDKWFCSNAD 222

Query: 240 SDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +D  ++LA+ +G       +  FL+P+ L DG+ N     RLK+K+G+RS A+ E+    
Sbjct: 223 ADLAMVLARPDGAPEGIKGLALFLLPKTLPDGTRNRYRIIRLKDKLGSRSMASGEIALEG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +L+G++      + DM  +  L + + +   MR +L EA+H A  R   G  LI+ P
Sbjct: 283 AQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           +M+R +  + L   AA A+  ++A    +A +   +AA   RI+ P+ K+  C+ A  V 
Sbjct: 343 LMQRQLIKMLLPAEAARAMFMQIALLLPQADAGDLQAARCVRILTPLIKFRACRDARRVT 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV  
Sbjct: 403 GDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVAR 446


>gi|168183589|ref|ZP_02618253.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|182673284|gb|EDT85245.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
          Length = 377

 Score =  303 bits (777), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 155/377 (41%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  DK    P    ++++   +G       + +        A+      +   + + 
Sbjct: 24  PIADEVDKTAEFP--KEIVKKMAQNGFFGIKMPKEYGGAGADNRAYVTIMEEISRASGVA 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +L SP+    +   L+ T    + +               PM +    +   LTE   
Sbjct: 82  GIYLSSPNSLLGTPFLLVGTDEQKEKYLK-------------PMIRGEKTLAFALTEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D  Y L+G K F++  P+SD+ I+ A+ +   G   +   + D  
Sbjct: 129 GSDAGALATTAREEGD-YYILNGRKTFITGAPISDSIIVFAKTDMSKGTKGITTFIVDSK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G+ + + ++K+G     T ++   N        L  V+ G +  MK L    +  A  
Sbjct: 188 QEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVNKGFITAMKTLSVGRIGVASQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ YA++R      +     ++  +AD+   + AA  L +  A   D  
Sbjct: 248 AIGIAQAAVDEAVKYAKQRKQFNRPIAKFQGIQFKLADMETKLNAAKLLVYNAAYKMDCG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EA+ A       KY+  + A  ++ +A++  GG GYI++  I R YR+    +I 
Sbjct: 308 EKADKEASMA-------KYFAAEAAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 361 EGTSQVQQMVIASNLLK 377


>gi|28211065|ref|NP_782009.1| acyl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28203504|gb|AAO35946.1| acyl-coA dehydrogenase [Clostridium tetani E88]
          Length = 635

 Score =  303 bits (777), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 148/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK    P     ++     G+    + + +        ++ I    L  +       L +
Sbjct: 32  DKENEFPT--EAIKNLAKMGMMGIPYAKEYGGAGLDVISYAIAVEELSRVDGGTGVILSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   A  +A   T    + +               P+ K       GLTE+  G+D   
Sbjct: 90  HTSLGAYPIADYGTEEQKQKYLI-------------PLAKGEKLGAFGLTEENAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +       G Y L+G K F+++   +D +I+ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEG-GHYILNGSKIFITNAGKADIYIIFAVTTPNIGTRGISAFIVEKGWEGFSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331
            +  +K+G RS+AT EL F+N         N+     E  KI +  LD   + ++   + 
Sbjct: 196 GQHYDKLGIRSSATGELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ Y++ R   G  +  Q V+   +AD+A  + AA  L +  A   +  +  
Sbjct: 253 IAQGAYEHALEYSKERIQFGKPICQQQVIAFKLADMATKLRAARLLIYSAAELKENNEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S E+A A+        +   +   ++ +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 SMESAMAKQ-------YASDVCLEIVNDALQIFGGNGYLKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + +
Sbjct: 366 NEIQRIVIASHI 377


>gi|298372038|ref|ZP_06982028.1| butyryl-CoA dehydrogenase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274942|gb|EFI16493.1| butyryl-CoA dehydrogenase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 379

 Score =  303 bits (776), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    GL        +         + +    L  +    
Sbjct: 26  PLAAEVDEEERFPL--ETVEKMAKTGLMGIPVPVKYGGAGGTNLMYGMAVEELSRVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +    + +    T      + P++ S E+                 GLTE   
Sbjct: 84  GVVLSAHTSLCCAPIMENGTEEQKMKYLPRLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G+K F+++ + +  +++ A  +  +G   +   + +  
Sbjct: 131 GTDAAMQQTTAVLDGD-QYVLNGNKIFITNAVYAHVYVIFAMTDKSLGNKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R +AT EL F +        L     G    MK L    +  A  
Sbjct: 190 TPGFSIGKKEKKMGIRGSATTELVFEDCRIPKENLLGQQGKGFAIAMKTLDGGRVGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ E I Y + R   G  +      +  +AD+   + AA  L        D  
Sbjct: 250 ALGIAQGAMDETIKYTKERKQFGRSISQFQNTQFQMADMETKVQAARLLVRSAHWKKDNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 MPYSVDAAMA-------KLFAAETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 363 EGTSEVQRMVIAGKLFK 379


>gi|257467952|ref|ZP_05632048.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|317062238|ref|ZP_07926723.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|313687914|gb|EFS24749.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
          Length = 636

 Score =  303 bits (776), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 146/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     +++    G+    + + +            A           G ++S 
Sbjct: 32  DKENEFPT--EAVKKLGEMGVLGIPFPKEYGGAGLDMISYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAYGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   ++ +I+ A     +G   +   + +    G  +
Sbjct: 137 TETTAVLEGD-YYILNGGKIFITNADKAETYIVFAVTTPDIGTRGISAFIVEKGWEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS 331
               +K+G RS++T EL F+N         N+     E  KI ++ LD   + ++   + 
Sbjct: 196 GDHYDKMGIRSSSTAELIFNNVKVP---KENLLGKEGEGFKIAMFTLDGGRIGIASQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q V+   +AD+A  + AA  L +  A   +  +  
Sbjct: 253 IAQGAFENALAYAKEREQFGKPIAFQQVISFKLADMATKLRAARFLVYSAAELKENHEDY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E+A A+        +   +   ++ EA++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 AMESAMAKQ-------YASDVCLEIVNEALQIFGGTGYLKGMEVERAYRDAKICTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + L
Sbjct: 366 NEIQRVVIASHL 377


>gi|66805817|ref|XP_636630.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4]
 gi|74852534|sp|Q54IM8|ACAD8_DICDI RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8 homolog;
           Flags: Precursor
 gi|60465018|gb|EAL63127.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4]
          Length = 416

 Score =  303 bits (776), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 139/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK E+ P    ++R +   G                +            A +  
Sbjct: 60  PFAEKWDKEEYFP--RDVMREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVST 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++ +  T    K + P + S E                   LTE   G
Sbjct: 118 TAFISIHNMCAGLIDIYGTEEQRKKFLPSLVSME-------------KIASYCLTEPGSG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  +++++  K  D  Y L+G K F+S    S+ ++++ +     G   +  LL +   
Sbjct: 165 SDAGSLSTKATKDGDH-YILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDT 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  +  T  L F +     G L+G          +      ++    S
Sbjct: 224 PGLSFGKKEEKLGWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACS 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G +  L  A  + + R      L     ++  +AD+A  + A+  +    A   D   
Sbjct: 284 LGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLHASRIMIRNAAAMLDAKD 343

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A +   + K + C     V  ++++  GG GY+++  + R+ R+   + IL 
Sbjct: 344 PS------AHVYIAMAKLFACDECFKVTDDSLQLFGGYGYLKDYPVERYLRDLRVHRILE 397

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M L +   L K
Sbjct: 398 GSDAVMRLIISRELSK 413


>gi|254229385|ref|ZP_04922801.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262396842|ref|YP_003288695.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151938076|gb|EDN56918.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262340436|gb|ACY54230.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 384

 Score =  303 bits (775), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 145/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     +     P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRAFADTAQQFADE--RLAPMAAEWDEKQIFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +           M        M+     + M+A   T      + PK+ + E
Sbjct: 58  AQGGLGLSRLDASIIFEQLAMGCTSTTAFMTIHNMVSWMIASFATDEAKTQFCPKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D AA+T+   K  D      G  +   +  +D 
Sbjct: 118 W-------------LGSYCLTEPNAGSDAAALTTSATKKGDKYVLNGGKTFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +      G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GEAGAKGVSAFVVPAQAGGISYGRKEPKMGWNSQPTRAVTFENVVVPASHLL 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFVFAMKGLDGGRINIATCSVGTAQQALNQAAWYIQERKQFGKPLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D           A     + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRNDPD------ATAYCAMAKRFATDVGFQVCDQALQLY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + RH+R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIKEYPMERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|317051571|ref|YP_004112687.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
 gi|316946655|gb|ADU66131.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
          Length = 382

 Score =  303 bits (775), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 78/401 (19%), Positives = 144/401 (35%), Gaps = 35/401 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL-RRSIHDGLHCSIWDRSFEPV 127
             Q L R                +R D+ E       L+  R    GL   ++  ++   
Sbjct: 7   EEQRLIRDTVREFATQEVAATAAQR-DETETFD--RELMFDRLAQLGLTGILFPETYGGA 63

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    L  +       L +     A+ + L  TP+  + +   + + E    
Sbjct: 64  GADYLSYALTVEELSRVCASTGVTLSAHVSLGANPINLFGTPQQKERYLRPLATGE---- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D     +   +  +         +  +   +D +++ 
Sbjct: 120 ---------KMGAFGLTEPSAGSDAGGTRTTAVRDGESWILNGSKNFITNGGEADIYVVF 170

Query: 247 AQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+ + +      +   L +    G  + + + K+G RS+ T EL F N    L    N+ 
Sbjct: 171 ARTDPQARKHHGISAFLVEKGTPGFSFGKKEVKMGIRSSPTTELVFENCHIPL---ENLL 227

Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               E  K+ +  LD   + ++   + +A+     A+ YAR R      + +   +  A+
Sbjct: 228 GSESEGFKVAMKTLDGGRIGIAAQALGIAQGALDHAVAYARERRQFDQPIGNFQAITFAL 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L +R A   D   S S EAA A       K +  + A  V   A++  
Sbjct: 288 ADMQTRVDAARMLVYRAAVQADSGSSYSREAAMA-------KLFASETAMDVTTRAVQIH 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  E  + R  R++    I  G+     L +   L +
Sbjct: 341 GGYGYTREYPVERMMRDAKITEIYEGTSEIQRLVIGTALLR 381


>gi|126324965|ref|XP_001380303.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 781

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 127/551 (23%), Positives = 216/551 (39%), Gaps = 54/551 (9%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCT 69
             +     F   QP L    N Y  D+LL   +         +  +++L+  G  V S  
Sbjct: 187 FARAGIGTFFQGQPSL---GNQYLEDALLRGYLKRHLPPKIFAEANQDLQKFGARV-SGE 242

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
              L +      P L  +    ++ D +   PAW  L R S  +GL    ++R +    R
Sbjct: 243 ILSLGQECEAMPPTLQNFDARVKQVDLILTCPAWKKLKRISAEEGLIAIAYERKYSNWSR 302

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 +AA+L++ +      +   ++T  +   L     V K   P     E      +
Sbjct: 303 ----VYQAAKLFMFSSSSGMFICPLAMTDGATKVL----EVMKSSGPP---GEAFSHLTS 351

Query: 190 PMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
              K     G  +TE +GG+D+A    +   K  DG Y L G KWF S+  +D  + LA+
Sbjct: 352 RDPKLFWTSGQWMTEHKGGSDVAHGTETVACKQVDGSYKLFGFKWFTSATDADMTMALAR 411

Query: 249 VEGR-----VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +         G   +         E G  NGL  QRLK K+G     T EL        L
Sbjct: 412 IMDAQGSVTKGTHGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHL 471

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +  +      + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  + 
Sbjct: 472 VSQVGRGVATIANMLNVTRIYNSIGAVGSMRRIVFMARDYATQRFVFGKFIKDHPLHTQT 531

Query: 359 IADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +A + + +     L   L       +   + ++++   R++A + K +  K A A+++E 
Sbjct: 532 LARMEVQVRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVSEG 591

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           +EC GG GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   QD
Sbjct: 592 LECFGGQGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQD 651

Query: 476 -----------------LGSSGKKVITILRDSISLCKE-DKGLARFLTEKIALASSAAAL 517
                            L  +  ++   L++ +       +  AR L   +A     A L
Sbjct: 652 KVALASDCSELASSVQCLQEALGRLALQLKNLLGQGSTSMEMAARDLVYTLARIYIGALL 711

Query: 518 YRAGMNDIADV 528
                   A+ 
Sbjct: 712 IEHA--AWAEA 720


>gi|325280696|ref|YP_004253238.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324312505|gb|ADY33058.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 379

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 137/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G+    + + +       Q + +    L  +    
Sbjct: 26  PLAAAVDEEERFPE--ETVKKMAALGMMGIPFPKEYGGAGGNNQLYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS +         + + P++ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCASPIYEFGNEEQRRKYLPRLCSGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD +A  +   K  +         +  ++  +  +I++A  +   G   +   + +   
Sbjct: 131 GTDASAQQTMAVKEGEHYVLNGSKIFITNAAYAHVYIVMAMTDKAQGTRGISAFIVERDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    + + K+G R +AT EL F N         N+     E  +I +  LD   M ++
Sbjct: 191 PGFSIGKKEKKMGIRGSATCELIFENCIVP---KENLLGKVGEGFRIAMKTLDGGRMGIA 247

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     E + Y + R   G  +      +  +AD+   I AA  L  + A   D
Sbjct: 248 SQALGIAQGAMDETVKYVKERKQFGRSIGQFQNTQFQLADLQTRIQAARLLVRKAAWKKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  S ++A A       K +  + A  V  +A++  GG GY  E  + R  R++    
Sbjct: 308 MKQPYSADSAQA-------KLFAAETAMEVTTKAVQFHGGYGYTREYPVERMMRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 361 IYEGTSEVQRMVIAAALLK 379


>gi|317470554|ref|ZP_07929942.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316902069|gb|EFV23995.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 632

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 138/371 (37%), Gaps = 32/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     + +    G+    + + +            A           G ++S 
Sbjct: 32  DKENEFPT--EAIEKFAKMGMMGLPYPKEYGGAGSDVLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +   + S E                  GLTE+  G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKQKYLVPLASGE-------------KLGAFGLTEQNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D      G  +  ++  +D +++ A     +G   +   + +    G  + 
Sbjct: 137 TETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGISAFIVEKGWEGFTFG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSL 332
              +K+G RS++T EL F++         N+     E  KI +  LD   + ++   + +
Sbjct: 197 DHYDKMGIRSSSTAELIFNDVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ Y++ R   G  +  Q  +   +AD+A  +  A  L +  A+  +  +   
Sbjct: 254 AQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLLVYSAADLKENHEPYG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+A A+        +   +   V+ +A++  GG+GY++   + R YR++   +I  G+ 
Sbjct: 314 LESAMAKQ-------YTSDICLEVVNDALQIFGGTGYLKGMDVERAYRDAKICTIYEGTN 366

Query: 448 NAMVLDVLNLL 458
               + + + +
Sbjct: 367 EIQRVVIASHI 377


>gi|152988795|ref|YP_001346933.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150963953|gb|ABR85978.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 575

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 146/538 (27%), Positives = 232/538 (43%), Gaps = 35/538 (6%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N Y+ D  L  L+    P  +  E     E LG          LA  A+ N P 
Sbjct: 16  PDSRGLNLYTCDPALERLLEVYLPPALLAEWRPVFERLGARAGG-ELDVLALAADKNPPV 74

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE    V  HP + AL R +  +    ++  R   P       K     L++ 
Sbjct: 75  LAPRTRRGEDRQSVRKHPDYIALERIAYAELGLAAMSHRPDGP---PPLVKYTLTHLFVQ 131

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A+      +S + +    +     P + + + P + SR++D   +  M          +T
Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAMF---------MT 182

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+  G+D+A   S  ++   G + L G KWF S+P +D  ++LA+ EG       V  FL
Sbjct: 183 EQAAGSDVARTCSVAREEG-GEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFL 241

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +P+L EDGS N     RLK+K+G+RS A+ E+       +L+G++      + DM  +  
Sbjct: 242 LPKLREDGSRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L + + +   MR +L EA+  AR R   G  L++ P+M++ +  + L    A ++  ++A
Sbjct: 302 LSNGVRAAGLMRRALNEALFVARHRRAFGRYLVEMPLMQKQLLKLMLPTEQARSMFMQIA 361

Query: 378 NSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                A     EA    RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR  R+
Sbjct: 362 TLLPRADGGDGEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRD 421

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494
           +   SI  G+ N + LD+   + +   L E L   L   L +SG  K    +    +   
Sbjct: 422 AHLGSIWEGTSNIVALDIARAVSREQAL-EPLRRHLRGLLDASGLPKAARDLFDGLLERV 480

Query: 495 KEDKG--LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHSTHCMLHGRF 549
            E      A+ L E++  A SA          I   +  +R   D       +L  R 
Sbjct: 481 VETMAGVAAQRLDEQVRQAGSA---LYHLCTAIFMAWEASRQAPDQRRLALALLVARH 535


>gi|188995036|ref|YP_001929288.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594716|dbj|BAG33691.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas
           gingivalis ATCC 33277]
          Length = 379

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    GL    +   +         + +    L  +    
Sbjct: 26  PLAAEIDEQERFPI--ETVKKMGEIGLMGIPFPVEYGGAGGTNVMYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   A+ +    T      + PK+ S E+                 GLTE   
Sbjct: 84  GVVLSAHTSLCATPIYENGTEEQKMKYLPKLCSGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD AA  +  ++  D    L+G+K F+++   +  +++ A  +   G   +   + +  
Sbjct: 131 GTDAAAQQTFAEEKEDHF-VLNGNKIFITNAEYAHVYVVFAMTDKSQGTRGITAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R +AT EL F N        L  V  G    MK L    +  A  
Sbjct: 190 TPGFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ E + Y + R   G  +      +  +AD+   I A+  L    +   D  
Sbjct: 250 ALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQASRLLVRLASWKKDMK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + E+A A       K +C + A  +  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 MPYTMESAQA-------KLYCAETAMDMTTKAVQFHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L + + L K
Sbjct: 363 EGTSEVQRLVIASNLLK 379


>gi|126652586|ref|ZP_01724750.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905]
 gi|126590577|gb|EAZ84694.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905]
          Length = 378

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 142/378 (37%), Gaps = 36/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER +  EF  A    +      GL    W   +        A+ I    L  +      
Sbjct: 29  AERDENEEFDRAIFDKM---AELGLTGIPWPEEYGGAGFDYLAYVIAVEELSRVCASTGV 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +  +   +    T    + +               PM +       GLTE   G+
Sbjct: 86  TLSAHTSLAGWPLYKFGTEEQKQKYL-------------RPMAEGKHIGAYGLTEPGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + +  ++  +  Y L+G K F+++  ++D +I+ A  +           + +    
Sbjct: 133 DAGGMKTYAKRDGND-YILNGSKIFITNGGVADTYIVFAVTDPEA-KNGTSAFIVEAGYE 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G RS+ T E+ F N         N+     E  KI +  LD     ++ 
Sbjct: 191 GFSVGKKEKKLGIRSSPTTEIIFDNCRVP---KENLLGAEGEGFKIAMTTLDGGRNGIAA 247

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     A+ YA+ R   G  +     +   +AD+A  I A+  L+++ A     
Sbjct: 248 QAVGIAQGALDAAVDYAKERVQFGKPITANQGVSFKLADMATQIEASRLLTYQAAWLESN 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                + +A A++MA          A +V  EA++  GG GY ++  + R  R++    I
Sbjct: 308 NLPYGKASAMAKLMAG-------DTAMSVTTEAVQVFGGYGYTKDYPVERFMRDAKITQI 360

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +  +L K
Sbjct: 361 YEGTQEIQRLVISRMLTK 378


>gi|319650928|ref|ZP_08005063.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397284|gb|EFV77987.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 376

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 145/377 (38%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  E+ ++ EF      +LR+    GL        +        ++ I    L  ++   
Sbjct: 26  PFVEKMEQGEFP---REILRKMGELGLMGIPIPEKYGGSEMDFTSYIIAIHELSRVSATV 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    T    + + PK+ S EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYIPKLASGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ S+  K  D         +  ++  +D +I+ A     +G   +   + +   
Sbjct: 130 GSDAGSLKSRAVKDGDHYVINGSKVFITNAGEADVYIVFASTNPELGSKGISAFIVEKDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL + + ++K+G   + T++L F +         N+     E  KI +  LD+  + ++
Sbjct: 190 PGLVFGKDEHKMGLHGSRTLQLTFEDMRVPS---ENLLGNEGEGFKIAMANLDAGRIGIA 246

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AEA       YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   
Sbjct: 247 SQALGIAEAAFEAAASYAKERVQFGKPIAAQQGVGFKLADMATSVEAAKLLIYRAADMRQ 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EA+ A       K +  K A  V  EA++  GG GY E+  + R++R++    
Sbjct: 307 RGIKCGLEASMA-------KLFASKTAVDVSTEAIQVFGGYGYTEDYPVERYFRDAKITE 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 360 IYEGTSEIQRIVISKQL 376


>gi|312112657|ref|YP_003990973.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311217758|gb|ADP76362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 379

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 141/364 (38%), Gaps = 33/364 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L +    GL        +        ++ I    +  ++      L   +    + +
Sbjct: 38  RPILNKMAELGLMGITVPEEYGGAGMDFISYIIAIHEISKVSATVGVILSVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + PK+ S EY                  LTE   G+D  ++ ++  +  
Sbjct: 98  LYFGTEEQKKKYVPKLASGEY-------------LGAFCLTEPGAGSDAKSLKTKAVRQG 144

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           D  Y L+G K F+++   +D +I+ A+ +    G   +   + +    G    + + K+G
Sbjct: 145 D-YYILNGSKIFITNGGEADTYIVFARTDPNEKGSRGISAFIVEKGTPGFIIGKDEKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI--- 336
              + TV++ F N         N+     +  KI +  LDS  + ++   + +AEA    
Sbjct: 204 LHGSRTVQIMFENAKVPA---ENLLGEEGQGFKIAMANLDSGRIGIAAQSLGIAEAALEH 260

Query: 337 --HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              YA+ R   G  + +Q  +   +AD+A  + AA  L +  A    +     +EAA A 
Sbjct: 261 ATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCGKEAAMA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  + A     EA++  GG+GY ++  + R +R++    I  G+     L +
Sbjct: 320 ------KLFASRTAMENAIEAVQIFGGNGYTKDYPVERLFRDAKICEIYEGTSEIQRLVI 373

Query: 455 LNLL 458
              L
Sbjct: 374 SKYL 377


>gi|78043397|ref|YP_360564.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995512|gb|ABB14411.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 384

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 152/380 (40%), Gaps = 30/380 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK--IRAARLYLMAQ 145
            P  ++ D+ +  P    +++++   GL        +  V         I   +L   A 
Sbjct: 25  DPISQQIDEEDRVPE--EIIQKARELGLFGLSIPEEYGGVGSIGMLGKCIIYEQLGRTAN 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                + + +    + +  + T    + + P + S                     LTE 
Sbjct: 83  GFTTLIGAHTGIGTTGIVELGTEEQKRRYLPDLASG-------------KKLAAFALTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL-VPRLLE 263
             G+D A+I +   K  D  Y L+G K F+++   +D F ++A  +   G    +   + 
Sbjct: 130 EAGSDAASIRTTAVKKGD-RYILNGVKHFITNGPDADVFTIIAVTDKSKGAKGGITAFIV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDS 320
           + +  G     ++ K+G R + T E+   +        L NV  G +  +KIL    +  
Sbjct: 189 EKNFPGFKVGTIEKKMGLRGSHTSEIILEDCEVPEENVLGNVGEGYINALKILAKGRVGL 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V  M+  L  +  YA++R   G  +     ++  +A++A+DI A    ++R+A   
Sbjct: 249 AARCVGSMQKLLELSTRYAQQRVQFGKPISSFQAIQHMLAEMAVDIEATRWFAYRVAWLV 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+     +EAA         K +  +    V+ +A++  GG GY++E  I R+YR++   
Sbjct: 309 DQGAKVIKEAA-------AVKLFASEAYGRVVDKAVQIFGGMGYMKEFPIERYYRDARIT 361

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       + + + K
Sbjct: 362 RIYEGTSEIQKNIIASQILK 381


>gi|212638028|ref|YP_002314548.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212559508|gb|ACJ32563.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 380

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 136/378 (35%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P      ++    GL    +   +        ++ I    +       
Sbjct: 26  PYASKWDEEAIFPI--DTFKKMGELGLFGIPFPEQYGGSGGDTISYAIAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTEEQKEKWL-------------VPMAKGEAFGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A   +   G  ++   +    
Sbjct: 131 GSDAGGTQTRAVLDGDEYVINGEKCWITNAGYARQVIVTAVTGKDERGKNIISAFIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G       +K+G R++ T EL   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 APGFTINCHYDKMGVRASNTCELVLQDVRVP---KENILGDPKKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A+ +  A  + ++ A   
Sbjct: 248 AALAVGIAQAAFEKALQYAKERKQFGQPIAKFQAIQFKLADMAMQLELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++EAA+A       K +  +    +  +A++  GG GY++E  + RH R+    
Sbjct: 308 DQGKPFTKEAAFA-------KLFASETGFHICNQAIQIHGGYGYMKEYGVERHLRDMKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQRLVIARQL 378


>gi|289449889|ref|YP_003474912.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184436|gb|ADC90861.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 379

 Score =  303 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 146/378 (38%), Gaps = 32/378 (8%)

Query: 92  ERWDKVE---FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           E  D+VE     P    +LR+    GL      R                  Y+M   E 
Sbjct: 25  EVLDEVEASGVFPE--EILRKFAKAGLFAIKVPRDLGGAGGNNV-------TYMMVMEEI 75

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR--EYDPTNKAPMQKTSVAIGLGLTEKR 206
             + + +    S    +++        P + S   +       P+      +   LTE  
Sbjct: 76  SKISAIASIYVSTANSLSS-------GPLLISGTKDQIQKYLLPIASGEKKVCFALTEPG 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D  ++T+      D  Y L+G K F++ +P++D  ++ A+ +   G   +   + D 
Sbjct: 129 AGSDPNSMTTSAVLDGDH-YVLNGRKCFITQAPLADYAVVYARTDATKGVKGITAFVVDM 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+   + ++K+G    AT ++ F +    +   L     G +  MK L    L  A 
Sbjct: 188 KAPGVTCGKPEDKMGIIGCATSDIIFEDVKVPVEDRLGAEGMGFINAMKTLDVGRLGVAA 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+     +L  +I YA+ R   G  +     +   +A++A  + AA  L++  A   D 
Sbjct: 248 QSIGVAGGALELSIQYAKERKQFGKPIAKFQAISFMLAEMATKLEAARQLTYHAAELKDR 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                     A     + K +  ++   + A+A++  GG G+I++  + R YR+    +I
Sbjct: 308 NDKN------AGRYCSMAKLFASEVCNEICAKAVQIHGGYGFIKDYKVERMYRDCRVFTI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N L K
Sbjct: 362 YEGTSQVQQIVISNSLLK 379


>gi|169333728|ref|ZP_02860921.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259577|gb|EDS73543.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM
           17244]
          Length = 634

 Score =  302 bits (774), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 153/386 (39%), Gaps = 32/386 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++++    G     + + +  V         A           G ++S  V+  S  + 
Sbjct: 40  EIVKKMAKLGFMGIPYPKKYGGVGLDIISYAIAVEELSRVDGGVGVILSAHVSLGSYPIF 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K +               P+ K       GLTE   G+D     +  +   D
Sbjct: 100 AFGSEEQKKKYL-------------VPLAKGEKLGAFGLTEPNAGSDAGGTETTAELKGD 146

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D +++ A     +G   +   + +    G  +    +K+G R
Sbjct: 147 -YYLLNGGKIFITNADKADTYVVFAVTTPGIGTRGISAFIVEKGWEGFEFGDHYDKMGIR 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           S+AT EL F++         N+     E  KI +  LD   + ++   + +A+     A+
Sbjct: 206 SSATAELIFNDVKVP---KENLLGKEGEGFKIAMATLDGGRIGIASQALGIAQGAYENAV 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +    V+   +AD+A  +  A  L++  A   +  +    E+A A++ 
Sbjct: 263 EYAKEREQFGTAIAHNQVIGFKLADMATKLRCARFLNYSAAELKEHHEPYGMESAMAKM- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +   +   V+ +A++  GGSGY++   + R YR++   +I  G+     + + +
Sbjct: 322 ------YSSDICLEVVNDALQIFGGSGYLKGMDVERAYRDAKICTIYEGTNEIQRVVIAS 375

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKK 482
            +   T   E++ +  +  +  + KK
Sbjct: 376 HIVGKTPKKEKVSAKAKGAITGARKK 401


>gi|86563381|ref|NP_001033378.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis
           elegans]
 gi|3881018|emb|CAA21490.1| C. elegans protein Y45F3A.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 617

 Score =  302 bits (774), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 126/535 (23%), Positives = 219/535 (40%), Gaps = 49/535 (9%)

Query: 34  MNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
            N Y  D +L   +           V  +L   G+ + S   + L R A    P+L    
Sbjct: 43  HNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQD 101

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G+R DK+     WH L +    +G+    ++ S +P VR+     + A+L+L +    
Sbjct: 102 AWGKRVDKLIVCNEWHKLKQICAEEGVISIGYEDSVDPFVRR---IHQVAKLFLFSPSAG 158

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 ++T  ++  L +       +     + E     ++     +   G  +TEK+GG
Sbjct: 159 LVSCPMAMTDGAVKTLTS----LNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGG 214

Query: 209 TDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRV--GCFLVPRLL 262
           +D+A    +   +I    Y L G+KWF S+  +D  + LA++   +G    G   +   L
Sbjct: 215 SDVAGGCDTYAVQIDKDTYRLHGYKWFSSAVDADVALTLARIVDSDGNALEGSRGLSLFL 274

Query: 263 -----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                E G+ NG+   RLKNK+G +   T EL         +GD       + +M  +  
Sbjct: 275 LKIRDESGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGDQGRGVAGISNMLNITR 334

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +A+ S+  MR  ++ A  Y+ +R V G      P+    +A + +D   +  L F  A
Sbjct: 335 IHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAA 394

Query: 378 NSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 +  KS   EA   R++ P+ K +  K A  +++E +EC GG GY+E+  +    
Sbjct: 395 RLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLL 454

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS----------SGKKVI 484
           R++    I  G+ N + LDVL +     N+       +EQ LG+          S + V 
Sbjct: 455 RDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLGNTKTEDEKLKKSKEAVE 514

Query: 485 TILRDSISLC-----------KEDKGLARFLTEKIALASSAAALYRAGMN-DIAD 527
           + L+    L                 +AR +   IA   S A L     +  +A+
Sbjct: 515 SALKQLQKLLVKASDSAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVAN 569


>gi|187778569|ref|ZP_02995042.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC
           15579]
 gi|187772194|gb|EDU35996.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC
           15579]
          Length = 635

 Score =  302 bits (774), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 66/349 (18%), Positives = 140/349 (40%), Gaps = 32/349 (9%)

Query: 115 LHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           +    + + +        ++ I    L  +       L + +   +  +    T    + 
Sbjct: 50  MMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVVLSAHTSLGSYPIFAYGTEEQKQK 109

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +               P+ K       GLTE+  G+D     +      D  Y L+G K 
Sbjct: 110 YL-------------VPLAKGEKIGAFGLTEENAGSDAGGTETTAVLEGDN-YVLNGEKI 155

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++   +D +++ A     +G   +   + + S  G  + +  +K+G RS+AT EL  +
Sbjct: 156 FITNAGEADIYVIFAVTTPNIGTRGISAFIVEKSFQGFSFGKHYDKMGIRSSATAELILN 215

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           +         N+     E  KI +  LD   + ++   + +A+     A+ Y++ R   G
Sbjct: 216 DVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQAIGIAQGAYENALEYSKERIQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q ++   +AD+A  + AA  L +  A+  +  +  S EAA A+        +   
Sbjct: 273 KPICHQQIIAFKLADMATKLRAARLLVYSAADMKENHERYSMEAAMAKQ-------YASD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +   ++ +A++  GGSGY++   + R YR++   +I  G+     + + 
Sbjct: 326 VCLEIVNDALQIFGGSGYMKGMEVERAYRDAKICTIYEGTNEIQRVVIA 374


>gi|152977527|ref|YP_001377044.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026279|gb|ABS24049.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 379

 Score =  302 bits (774), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 148/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+ E      AL  +    GL    W   +  +     A+ I    L       
Sbjct: 26  PTAAKRDEEESFD--RALFDQMAALGLTGIPWPEEYGGIGSDYLAYVIAVEELSRACAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +  +   +    T    + +               PM +       GLTE   
Sbjct: 84  GVTLSAHTSLAGWPIFTFGTEAQKQQFL-------------RPMAEGKKIGAYGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   + +  ++  +  Y L+G K F+++  ++D +++ A  +           + +  
Sbjct: 131 GSDAGGMKTTARREGNH-YILNGSKIFITNGGIADIYVVFALTDLEAKQRGTSAFIVESD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G RS+ T E+ F +    +    N+     +  KI +  LD     +
Sbjct: 190 APGFLIGKKESKLGIRSSPTTEIIFEDCRIPV---ENLLGEEGQGFKIAMQTLDGGRNGI 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+A     + YAR RH  G  +  Q  +   +AD+A ++ AA  L+++ A   
Sbjct: 247 AAQAVGIAQAALDVSVAYARERHQFGKPIAAQQGISFKLADMATNVEAARLLTYQAAWLE 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E     +E+A        +K +   +A  V  EA++  GG GY ++  + R  R++   
Sbjct: 307 SEGLPYGKESAM-------SKLFAGDIAMKVATEAVQIFGGYGYTKDYPVERFMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +  +L K
Sbjct: 360 QIYEGTQEIQRLVISRMLTK 379


>gi|269967501|ref|ZP_06181557.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269827883|gb|EEZ82161.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 384

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 146/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     +     P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRAFADTAQQFADE--RLAPMAAEWDEKQIFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
             + +   +           M        M+     + M+A  +   V   +  K+ S E
Sbjct: 58  EHDGLGLSRLDASIIFEQLAMGCTSTTAFMTIHNMVSWMIASFSNEEVRAKYCSKLVSGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D AA+T+   K  D      G  +   +  +D 
Sbjct: 118 W-------------LGSYCLTEPNAGSDAAALTTSATKKGDKYVLNGGKTFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GEAGAKGVSAFVVPAHADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFVFAMKGLDGGRINIATCSVGTAQQALNQAARYIQERKQFGKPLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D           A     + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRNDPD------ATAYCAMAKRFATDVGFQVCDQALQLY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + RH+R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIKEYPMERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|167745562|ref|ZP_02417689.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662]
 gi|167654874|gb|EDR99003.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662]
          Length = 383

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 141/384 (36%), Gaps = 38/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P      ++   +G       + +         + +    L  +    
Sbjct: 26  PLAQDVDETEQFP--KETAQKMAKNGFLGIPIPKEYGGQGCDPLTYVMCVEELAKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      +    T    K + P + S                    GLTE   
Sbjct: 84  SVIVSAHTSLCCDPIMTYGTEEQKKKYLPDLASG-------------KKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLL 262
           GTD     ++     D  + L+G K F+++   +D +I++A      +       +   +
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKEADVYIVIAVTGIIEKRGRKLKEISAFI 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            D    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD  
Sbjct: 190 VDKGTPGFSFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGKQGKGFGIAMHTLDGG 246

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + LAE      + Y + R   G  +      +  +AD+A  + AA  L ++ 
Sbjct: 247 RIGIASQALGLAEGALEATVEYVKERKQFGRTIGQFQNTQFQLADMATKVEAAKLLVYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +    K  S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R+
Sbjct: 307 AMAKATQKVYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMRD 359

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 360 AKITEIYEGTSEVQRMVISGNLLK 383


>gi|304438947|ref|ZP_07398870.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372613|gb|EFM26196.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 380

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 134/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  E  P  +  +++    G     + + +        A+ +    L       
Sbjct: 26  PIAADIDISEEVP--YENIKKLAKYGFFGIPFPKEYGGQGADYVAYAMAIEELSKKCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    T    K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   +D FI++A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTIAVLDGDH-YILNGTKIFITNAGFADVFIIIAMTDKSQGTKGISAFIVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G      ++K+G R+++T EL F N        L     G    MK L    +  A  
Sbjct: 190 FEGFRVGEPEDKMGIRASSTCELIFENCKVPKENLLGREGKGFGLAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V     ++ E I Y + R   G  +      +  +AD+     AA  L +R A++    
Sbjct: 250 AVGIAEGAIDETIKYTKERKQFGRRISQFQNTQFQLADMKTKAEAAQLLVYRAADAKQNK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S  AA A       K +  + A  V    ++  GG GY ++  I R  R++    I 
Sbjct: 310 IPYSHYAAMA-------KLFASETASDVTRRCLQLFGGYGYTKDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M + V   +
Sbjct: 363 EGTSEVMRMVVSGWM 377


>gi|296126580|ref|YP_003633832.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
 gi|296018396|gb|ADG71633.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
          Length = 381

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 136/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 26  PLAAEVDEEERFPV--ETVKKMAEIGLMGIPIPKEYGGAGGDNLMYAMAVEELSRVCGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVILSAHTSLGTWPILQFGTDAQKQKYLPKLASGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + L+G K F+++   ++ +++ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAVLDEAAQEWVLNGSKIFITNSGYANVYVIFAMTDKSKGLKGISAFIVES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
           +  G    + + K+G R +AT EL F N        L  +  G    M  L    +  A 
Sbjct: 191 TAPGFSIGKKEKKLGIRGSATCELIFENARIPKDNLLGELGKGFKIAMMTLDGGRIGIAS 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  + +    +  +A++ + + A+  L ++ A     
Sbjct: 251 QALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEASRLLVYKAAWRESN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 311 HLPYSVDAARA-------KLFASETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEI 363

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 364 YEGTSEVQRMVIAGSLLK 381


>gi|293402114|ref|ZP_06646253.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304506|gb|EFE45756.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 633

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 137/371 (36%), Gaps = 32/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P+    + +    G+    + + +            A           G ++S 
Sbjct: 32  DKENEFPS--EAIAKFADMGMMGLPYPKEYGGAGADVLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +         + +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGNEEQKQKYL-------------TPLAKGEKLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D      G  +  ++P++D +++ A      G   +   + +    G  + 
Sbjct: 137 TETTAVLEGDHYILNGGKIFITNAPVADTYVVFASTNPDAGTHGISAFIVEKGWEGFTFG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332
              +K+G RS++T EL F+N         N+     +  KI +  LD   + ++   + +
Sbjct: 197 DHYDKMGIRSSSTAELIFNNVKVP---KENLLGKEGQGFKIAMATLDGGRIGIAAQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ YA+ R   G  +  Q  +   +AD+A  +  A  L +  A   +  +   
Sbjct: 254 AQGAYEHALEYAKERIQFGKPIAQQQAISFKLADMATKLRCARFLVYSAAELKEAHEPYG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+A A+        +   +   V+ +A++  GGSGY++   + R YR++   +I  G+ 
Sbjct: 314 MESAMAKQ-------YTSDICLEVVNDALQIFGGSGYLKGMEVERAYRDAKICTIYEGTN 366

Query: 448 NAMVLDVLNLL 458
               + + + +
Sbjct: 367 EIQRVVIASHI 377


>gi|126324963|ref|XP_001380274.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica]
          Length = 633

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 130/524 (24%), Positives = 209/524 (39%), Gaps = 37/524 (7%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARM 76
            F   QP L    N Y  D+LL   +         + V+++L+  G  V S     L + 
Sbjct: 46  TFFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEVNQDLQRFGARV-SGEILSLGQE 101

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
                P+L  +   G+R D +    AW  L R S  +GL    ++R +    R      +
Sbjct: 102 CEAMPPRLQHFDGWGQRVDHILTCSAWKKLKRISAEEGLIAIGYERKYSNWSR----VYQ 157

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA+L++            ++T  +   L     V K   P     E      +   K   
Sbjct: 158 AAKLFMFCPSSGMFSCPLAMTDGATKVL----EVMKSSGPP---GEAFSHLTSRDPKLFW 210

Query: 197 AIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252
             G  +TE++GG+D+A    +   K  DG Y L G KWF S+  +D  + LA++      
Sbjct: 211 TSGQWMTERKGGSDVAHGTETVACKQDDGTYKLFGFKWFTSATDADMTLALARIMDAQGS 270

Query: 253 --VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
              G   +         E G  NGL  QRLK K+G     T EL        L+      
Sbjct: 271 VTKGTQGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHLVSQEGRG 330

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M  +  + ++I +V  MR  +  A  YA +R V G  + D P+  + +A + + 
Sbjct: 331 VATIANMLNITRIYNSISAVGYMRRIVFMARDYATQRFVFGKFIKDHPLHTQTLARMEVQ 390

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA---YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +     L   L+ S  + + +S         R + PI        A A+++E +EC GG 
Sbjct: 391 VRGGFLLVMELSRSLGKWRLQSSAQKIRGIFRGLTPIAGQTLSSQAVAIVSEGLECFGGQ 450

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY+E+ ++    R+S   +I  G+ N + LD L +L K      Q FS   QD  +S   
Sbjct: 451 GYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQDKVASAS- 509

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
             + L  S+   +E   L R   +   L    +        D+A
Sbjct: 510 DCSELASSVQCLQE--ALGRLALQLEKLLGQGSTSMEMAARDLA 551


>gi|295707243|ref|YP_003600318.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804902|gb|ADF41968.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 375

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 145/362 (40%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             LL++    GL      + +        ++ I    +  ++      L   +    + +
Sbjct: 37  RGLLKQMADLGLMGIPVPQVYGGGGLDFVSYMIAIHEISKVSPALGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    + +  K+ + +                   LTE   G+D A++ ++ ++  
Sbjct: 97  VVFGTEDQKQKYVKKLATGKC-------------LGAFCLTEPSAGSDAASLKTKAERKG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D +I+ A+     G   +   + + +  G    + ++K+G  
Sbjct: 144 DHYLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSAFIVEKTMEGFSVGKDEHKMGLH 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F N    +    N      E  +I +  L++  + ++   V +AE     A 
Sbjct: 204 GSRTVQLHFENMQVPV---ENRLGEEGEGFRIAMANLNAGRIGIAAQAVGIAEGALTAAK 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA  R+  G  ++ Q  +   +AD+   + +A  L +R A  +D+     +EA+ A   
Sbjct: 261 NYANERYQFGKPILSQQGIAFKLADMETAVESAKLLMYRAAFLYDQKLPCKKEASMA--- 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  + A  V  +A++ +GG GY+++  + R++R++    I  G+     + + +
Sbjct: 318 ----KLFASQTAMNVAIDAIQVLGGYGYMKDYPVERYFRDAKVCEIYEGTSEIQRIVISS 373

Query: 457 LL 458
            L
Sbjct: 374 QL 375


>gi|34540812|ref|NP_905291.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas
           gingivalis W83]
 gi|34397126|gb|AAQ66190.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas
           gingivalis W83]
          Length = 379

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    GL    +   +         + +    L  +    
Sbjct: 26  PLAAEIDEQERFPI--ETVKKMGEIGLMGIPFPVEYGGAGGTNVMYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   A+ +    T      + PK+ S E+                 GLTE   
Sbjct: 84  GVVLSAHTSLCAAPIYENGTEEQKMKYLPKLCSGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD AA  +  ++  D    L+G+K F+++   +  +++ A  +   G   +   + +  
Sbjct: 131 GTDAAAQQTFAEEKEDHF-VLNGNKIFITNAEYAHVYVVFAMTDKSQGTRGITAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R +AT EL F N        L  V  G    MK L    +  A  
Sbjct: 190 TPGFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ E + Y + R   G  +      +  +AD+   I A+  L    +   D  
Sbjct: 250 ALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQASRLLVRLASWKKDMK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + E+A A       K +C + A  +  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 MPYTMESAQA-------KLYCAETAMDMTTKAVQFHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L + + L K
Sbjct: 363 EGTSEVQRLVIASNLLK 379


>gi|294501895|ref|YP_003565595.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351832|gb|ADE72161.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 375

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 148/362 (40%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             LL++    GL      +++        ++ I    +  ++      L   +    + +
Sbjct: 37  RGLLKQMADLGLMGIPVPQAYGGGGLDFVSYMIAIHEISKVSPALGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    + +  K+ + EY                  LTE   G+D A++ ++ ++  
Sbjct: 97  VVFGTEDQKQKYVKKLATGEY-------------LGAFCLTEPSAGSDAASLKTKAERKG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D +I+ A+     G   +   + + +  G    + ++K+G  
Sbjct: 144 DHYLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSAFIVEKTMEGFSVGKDEHKMGLH 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F N    +    N      E  +I +  L++  + ++   V +AE     A 
Sbjct: 204 GSRTVQLHFENMQVPV---ENRLGEEGEGFRIAMANLNAGRIGIAAQAVGIAEGALTAAK 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA  R+  G +++ Q  +   +AD+   + +A  L +R A  +D+     +EA+ A   
Sbjct: 261 NYANERYQFGKLILSQQGIAFKLADMETAVESAKLLMYRAAFLYDQKLPCKKEASMA--- 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  + A  V  +A++ +GG GY+++  + R++R++    I  G+     + + +
Sbjct: 318 ----KLFASQTAMNVAIDAIQVLGGYGYMKDYPVERYFRDAKVCEIYEGTSEIQRIVISS 373

Query: 457 LL 458
            L
Sbjct: 374 QL 375


>gi|257452716|ref|ZP_05618015.1| Acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|257466577|ref|ZP_05630888.1| Acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917732|ref|ZP_07913972.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059257|ref|ZP_07923742.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684933|gb|EFS21768.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313691607|gb|EFS28442.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 381

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 139/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+        +            A      A    
Sbjct: 26  PLATELDEEERFPV--ETVKKMAEIGIMGIPIPTQYGGAGGDNLMYAMAVEELSRACGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVVVSAHTSLGSWPILKFGTEAQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD +   +      +   + ++G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDASGQQTTAVFDEEKQEWIINGSKIFITNAGYAHVYVVFAMTDKSKGVKGISAFIIES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F +     +   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFSIGKKEKKLGIRGSATCELIFEDVR---IPKENLLGDLGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + LA     EA+ Y + R   G  L         +A++ + + A+  L ++ A +
Sbjct: 248 IASQALGLAQGALDEAVQYVKERKQFGRALSKFQNTAFQLANMEVKVEASRLLVYKAAWN 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNHLPYTVDAARA-------KLFAAETAMEVTTKAVQLFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 361 TEIYEGTSEVQRMVISGNLLK 381


>gi|300814959|ref|ZP_07095187.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300510929|gb|EFK38201.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 642

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 141/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    ++++   +G     + + +            A           
Sbjct: 25  PNAFAMDQANEFPD--EIVKKMGENGWMGIPYSKEYGGAGLDAISYAIAVEELSRVDAGC 82

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  S  +    T    K +               P+ K       GLTE   
Sbjct: 83  GVILSAHTSLGSYPIEAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +  +   D      G  +  ++P +D +++ A     +G   +   + +   
Sbjct: 130 GSDAGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAVTTPGIGTHGISAFIVEKGW 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           +G  +    +K+G RS++T EL F+          N+     +  +I +  LD   + ++
Sbjct: 190 DGFTFGDHYDKMGIRSSSTAELTFNKVKVP---KENLLGQEGQGFRIAMQTLDGGRIGIA 246

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA+ R   G  +  Q  +   IAD+A  I AA  L +  A    
Sbjct: 247 SQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADMATKIRAARLLIYSAAEMKT 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  S EAA A+  A  T  +C         EA++  GGSGY++   + R YR++   +
Sbjct: 307 NHEKYSMEAAMAKTYASETALFC-------ANEALQIHGGSGYMKGMEVERFYRDAKITT 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + V N +
Sbjct: 360 IYEGTSEVQRVVVANNI 376


>gi|291165783|gb|EFE27831.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
          Length = 643

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 146/362 (40%), Gaps = 32/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
             +++    GL    + + +            A           G ++S  V+  S  +A
Sbjct: 40  EAVKKMGELGLMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVILSAHVSLGSYPIA 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P+ K       GLTE   G+D     +  + + D
Sbjct: 100 AFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPEAGSDAGGTQTVAELVGD 146

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G+K F+++ P +D +++ A     +G   +   + +    G  +    +K+G R
Sbjct: 147 H-YILNGNKIFITNAPKADTYVVFAVTTPGIGVKGISAFIIEKGWEGFTFGDHYDKLGIR 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           S++T EL F+N         N+     +  +I +  LD   + ++   + +A+     A+
Sbjct: 206 SSSTAELIFNNVKVP---KENLLGKEGQGFRIAMATLDGGRIGIASQALGIAQGAYEHAL 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA+ R   G  +  Q  +   IAD+A  + A+  + +  A   +  +S   EAA A+  
Sbjct: 263 NYAKERVQFGKPIAFQQAISFKIADMATKLRASRFMIYSAAELKEHHESYGMEAAMAKQ- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +       ++ +A++  GGSGY++   + R YR++   +I  G+     + + +
Sbjct: 322 ------YASDNCLEIVNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGTNEIQRVVIAS 375

Query: 457 LL 458
            L
Sbjct: 376 YL 377


>gi|167570574|ref|ZP_02363448.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 591

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 140/516 (27%), Positives = 230/516 (44%), Gaps = 35/516 (6%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+           +  EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGVNFFTSDPDCAALLRLHLGDARYRALEPELRALGLRA-SDELDRLASRADKNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH     GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 80  LHPRTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D  ++  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  E+AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLSKADAGDEQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF-EQLFSTLEQDLGSSGKKVITILRD 489
           AR  R++   SI  G+ N + LDV   +++   L   + F     D         T LR 
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDLLDAARLPDASATRLRR 485

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           ++    +            AL   AA+        I
Sbjct: 486 ALDRASDALERVAQ-AGDDALVRQAASALYHATTAI 520


>gi|282882090|ref|ZP_06290731.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
 gi|281298120|gb|EFA90575.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
          Length = 642

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 141/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    ++++   +G     + + +            A           
Sbjct: 25  PNAFAMDQANEFPD--EIVKKMGENGWMGIPYSKEYGGAGLDAISYAIAVEELSRVDAGC 82

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  S  +    T    K +               P+ K       GLTE   
Sbjct: 83  GVILSAHTSLGSYPIEAFGTEEQKKKYL-------------VPLAKGEKLGAFGLTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +  +   D      G  +  ++P +D +++ A     +G   +   + +   
Sbjct: 130 GSDAGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAVTTPGIGTHGISAFIVEKGW 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           +G  +    +K+G RS++T EL F+          N+     +  +I +  LD   + ++
Sbjct: 190 DGFTFGDHYDKMGIRSSSTAELTFNKVKVP---KENLLGQEGQGFRIAMQTLDGGRIGIA 246

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA+ R   G  +  Q  +   IAD+A  I AA  + +  A    
Sbjct: 247 SQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADMATKIRAARLMIYSAAEMKT 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  S EAA A+  A  T  +C         EA++  GGSGY++   + R YR++   +
Sbjct: 307 NHEKYSMEAAMAKTYASETALFC-------ANEALQIHGGSGYMKGMEVERFYRDAKITT 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + V N +
Sbjct: 360 IYEGTSEVQRVVVANNI 376


>gi|163793385|ref|ZP_02187360.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181187|gb|EDP65702.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 574

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 134/521 (25%), Positives = 219/521 (42%), Gaps = 37/521 (7%)

Query: 29  PLFIGMNAYSSD-----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+NAY  D      L + L A+  + +    E LG+ +      +LA  A+ N P 
Sbjct: 22  PDTNGINAYRDDEALQQLLALYLPASDLATLRPTFESLGDLIGGR-LDQLAHSADRNPPT 80

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH     G     +E HPA+  + R    +    ++  R    +     H  + A  YL 
Sbjct: 81  LHPRDRQGRDRQWIEKHPAYTEMERIGYGEFAMAAMSHRPALGLNHPVPHAAKYAIQYLF 140

Query: 144 AQLEAGHLMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           AQ E G L   S+T A    +     P + + + P + + +          +  +   + 
Sbjct: 141 AQAEFGLLCPISMTDALTRTIRHFADPALVERYLPGLTADD---------LEHQIQGAMF 191

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255
           +TE+  G+D+ A  ++     +  + L G KWF S+  +   ++LA+ EG       V  
Sbjct: 192 MTERAAGSDVGATITRAVPNGNA-WRLHGDKWFCSNTDAGLALVLARPEGAPSGIKGVSL 250

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+PR L +G  N     RLK+K+G RS  + E+       +++G+       + +M   
Sbjct: 251 FLLPRDLPEGGRNAYRIVRLKDKLGTRSMPSGEITLEGALAWMVGEPGQGFVQMAEMINQ 310

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L +A+ S   MR +  EA+  AR R   G  LID P+ +R +  I L    A ++   
Sbjct: 311 SRLSNAVRSAGMMRRAWREAVTVARGRSAFGRRLIDMPLQQRQLLKILLPGEQALSMVLY 370

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A++   A S   E  A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE    R  
Sbjct: 371 TADALSRADSGDAEGKALRRILTPLVKFRVCRDARKVTGDAMEARGGVGYIEEWIEPRLL 430

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFE------------QLFSTLEQDLGSSGKK 482
           R+S   SI  G+ N + LDVL    K +                ++ + L + L     +
Sbjct: 431 RDSHLGSIWEGTSNIVALDVLRAARKDSAHTALGDALRRRMTATEVPAELRKQLAELLDR 490

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523
            +  +  +     +    AR +   +   +SA  L   G  
Sbjct: 491 AVQAVDVAAVAGLDGDQHARTVASGLYHTASACLLAAEGST 531


>gi|121608848|ref|YP_996655.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553488|gb|ABM57637.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 581

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 135/520 (25%), Positives = 224/520 (43%), Gaps = 31/520 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G N ++SD+ L  L+A +        +    E LG          LA++A+ N P
Sbjct: 10  VPDRHGQNLFTSDTQLHGLLALYLPPDLLRHMQPHFERLGALAGGR-LDALAQVADQNPP 68

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L      G    ++  HPA+  + R +  + GL      +       +    ++    Y
Sbjct: 69  RLEHRTRTGIDAQRIVKHPAYVEMERMAFSEFGLAAMSHRQETLGWKGRMPPIVKYLLTY 128

Query: 142 LMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     S++   A  +    +P +   + P++ + ++D   +  M        
Sbjct: 129 LFVQAEFGLCCPVSMSDSLARTLGKFGSPELIGRFLPRLQALDFDQLAQGAMF------- 181

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TE+  G+DIAA  ++  +   G++ LSG KWF S+P +D  ++LA+ +        +
Sbjct: 182 --MTEQAAGSDIAATQTRAWQDGQGLWRLSGDKWFCSNPDADLAMVLARPDAAPAGMQGL 239

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G        + DM 
Sbjct: 240 SLFLLPRRLEDGSANHYRIIRLKDKLGTRSMASGEIRLEGAVAYLVGQAGRGFQQMADMV 299

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + +   MR +LAEA   A  R   G  L D P+M+R +  + L    A ++ 
Sbjct: 300 NNSRLSNGVRAAGLMRRALAEAEFIASERLAFGQRLADMPLMQRQLDKLRLPTEQARSMV 359

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F+ A +   A      A A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R
Sbjct: 360 FQTAQALARADGGDAGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWSDPR 419

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG---TNLFEQLFSTLEQDLGSSGKKVITILRD 489
             R++   SI  G+ N + LDV+  + +      L     + LEQ   ++     +    
Sbjct: 420 LVRDAHLGSIWEGTSNIVALDVMRAIRREQALPALQRHFGALLEQ---TAVAPAFSAALG 476

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           +               +   +A  AA+      + IA  +
Sbjct: 477 AALTRAAALASTAAQADGAGIARQAASALYHSCSAIAMAW 516


>gi|152977528|ref|YP_001377045.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026280|gb|ABS24050.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 376

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 134/362 (37%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    L  ++      L   +    + +
Sbjct: 38  KEILKKMGELGLMGIPAPAKYGGAGMDFISYILAIEELSKVSAAIGVILAVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPGAGSDAGSLKSRAIKDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +         +  +   +D +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 NQYVINGSKIFITNGGEADTYIVFASTNPEAGKSGISAFIVEKGTPGLIIGKDEHKMGLH 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     A+
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAV 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKERKQFGKPIAAQQGVGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +  K A  V  EA++ +GG GY +E  + R +R++    I  G+     L +  
Sbjct: 315 ASVAKLFASKTAVEVAIEAVQVLGGYGYTKEYPVERFFRDAKICEIYEGTSEIQRLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|317472841|ref|ZP_07932151.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316899683|gb|EFV21687.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 383

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 140/384 (36%), Gaps = 38/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P       +   +G       + +         + +    L  +    
Sbjct: 26  PLAQDVDETEQFP--KETAEKMAKNGFLGIPIPKEYGGQGCDPLTYVMCVEELAKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      +    T    K + P + S                    GLTE   
Sbjct: 84  SVIVSAHTSLCCDPIMTYGTEEQKKKYLPDLASG-------------KKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLL 262
           GTD     ++     D  + L+G K F+++   +D +I++A      +       +   +
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKEADVYIVIAVTGIIEKRGRKLKEISAFI 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            D    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD  
Sbjct: 190 VDKGTPGFSFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGKQGKGFGIAMHTLDGG 246

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + LAE      I Y + R   G  +      +  +AD+A  + AA  L ++ 
Sbjct: 247 RIGIASQALGLAEGALEATIEYVKERKQFGRTIGQFQNTQFQLADMATKVEAAKLLVYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +    K  S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R+
Sbjct: 307 AMAKATQKVYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMRD 359

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 360 AKITEIYEGTSEVQRMVISGNLLK 383


>gi|281204080|gb|EFA78276.1| acyl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 824

 Score =  301 bits (772), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 134/375 (35%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ EF P    ++R +   G      D         +            A +  
Sbjct: 470 PFAPKWDQEEFFP--KEVMREAAELGFGGIYVDPEVGGSGLSREDATIIFEALSSADVST 527

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++ +  T      + P +              K        LTE   G
Sbjct: 528 TAYISIHNMCAGLIDIYGTNEQRHKYLPSLT-------------KMESLSSYCLTEPGSG 574

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A+++++  +  D         +      SD ++++ +  G  G   +  LL +    
Sbjct: 575 SDAASLSTKAVRDGDHFVLNGSKAFISGGGESDVYLVMVRT-GEKGAKGISCLLIEKDTP 633

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL + + + K+G  +  T  +   +       L+G          +      L+    S+
Sbjct: 634 GLSFGKKEEKLGWNTQPTRAVIMEDCRVPVANLIGKEGQGFNIAMNALNGGRLNIGACSL 693

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + SL  A  + + R   G  L +   ++  +AD+A  + AA  +    A   D    
Sbjct: 694 GGAQASLVAARDHLKVRKQFGQPLANFQSIQFKLADMATKLYAARTMLRNSAKMLDAKDQ 753

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +      A +   + K + C     +  EA++  GG GY+++  I R+ R++  + IL G
Sbjct: 754 Q------AAVYIAMAKLFTCDTCFEICDEALQLHGGYGYLKDYPIERYLRDTRVHRILEG 807

Query: 446 SGNAMVLDVLNLLEK 460
           S   M L     + K
Sbjct: 808 SDAVMRLITSREILK 822


>gi|297585456|ref|YP_003701236.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297143913|gb|ADI00671.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 380

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 132/369 (35%), Gaps = 30/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSV 156
           E  P   ALLR     GL     +           ++ I    L  ++      L   + 
Sbjct: 35  ETFPD--ALLREMGELGLLGIPVEEEHGGAGMDFTSYIIAIHELSKVSATLGVILSVHTS 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
              + +    T      + PK+ S E+                  L+E   G+D A++ +
Sbjct: 93  VGTNPIRYYGTADQISRYVPKLASGEW-------------LGAFALSEPGAGSDAASLRT 139

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +K  D         W  +   +D +I+ A+ +   G   +   + +    G      +
Sbjct: 140 TAKKDGDHYILNGSKAWITNGGYADTYIVFAKTDPDAGKKGITAFIVEKDTPGFTVLAKE 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   ++T  L F +        L            L  LD   + ++   + +AEA 
Sbjct: 200 RKMGLLGSSTTGLAFEDCRIHESRRLGEEGQGYT--IALSNLDYGRVGIAAQALGIAEAA 257

Query: 337 -----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 YA+ R   G  +  Q  +   +AD+A  + AA  L++  AN  D+  +   EA+
Sbjct: 258 LEHATDYAKERKQFGKPIAMQQGLAFKLADMATAVEAAKLLTYSAANRKDQGLTTGIEAS 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +    A  V  EA++  GG GY ++  + R +R++    I  G+     
Sbjct: 318 MA-------KTFASDTAMKVTTEAIQVFGGYGYTKDYPVERFFRDAKVTQIYEGTNEIQR 370

Query: 452 LDVLNLLEK 460
           + +   L K
Sbjct: 371 IVIAGQLLK 379


>gi|147676350|ref|YP_001210565.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|147676848|ref|YP_001211063.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|147678104|ref|YP_001212319.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146272447|dbj|BAF58196.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146272945|dbj|BAF58694.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274201|dbj|BAF59950.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 379

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 140/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+  + P     +++          +   +          I        A    
Sbjct: 26  PIADKVDQEAYFPM--ETVKKLAEQEWTGIPYPVEYGGAGSDYLTYIIVLEELSRACATT 83

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  +   +  ++  +    T    K W               PM K  +     LTE   
Sbjct: 84  GFTLECHTSLASYPIYKYGTEEQKKKWL-------------VPMCKGEILGSFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD A+  S    + D         +  ++P++   ++ A  +   G   +   +     
Sbjct: 131 GTDAASGQSTAVLVGDEYVLNGTKMFISNAPVAGVLVIFASTDKSKGAKGISAFIVPADA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   +  NK+G R + T E+   +     +   N+     E  KI +  LD   + ++
Sbjct: 191 PGLQIGKHLNKMGIRGSLTAEVIMKDCR---IPKENLLGKEGEGFKIAMSTLDGGRIGIA 247

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+A     I Y++ R   G  +     ++  IA++A D+ AA  L++  A  +D
Sbjct: 248 AQALGIAQAALDESISYSKERVQFGKPISSFQAIQWMIANMATDVEAARFLTYYAAWCYD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  S+EAA A       + +  + A      A++  GG GYI+   + R YR++    
Sbjct: 308 QGRPYSKEAAMA-------RLFASECAARHTNRAVQIHGGIGYIKGHKVERLYRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+   M + +   L +
Sbjct: 361 IYEGTNEVMRMVIAGNLLR 379


>gi|167745829|ref|ZP_02417956.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662]
 gi|167654693|gb|EDR98822.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662]
          Length = 632

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 138/371 (37%), Gaps = 32/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     + +    G+    + + +            A           G ++S 
Sbjct: 32  DKENEFPT--EAIEKFAKMGMMGLPYPKEYGGAGSDVLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +   + S E                  GLTE+  G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKQKYLVPLASGE-------------KLGAFGLTEQNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D      G  +  ++  +D +++ A     +G   +   + +    G  + 
Sbjct: 137 TETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGISAFIVEKGWEGFTFG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSL 332
              +K+G RS++T EL F++         N+     E  KI +  LD   + ++   + +
Sbjct: 197 DHYDKMGIRSSSTAELIFNDVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ Y++ R   G  +  Q  +   +AD+A  +  A  L +  A+  +  +   
Sbjct: 254 AQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLLVYSAADLKENHEPYG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+A A+        +   +   V+ +A++  GG+GY++   + R YR++   +I  G+ 
Sbjct: 314 LESAMAKQ-------YTSDICLEVVNDALQIFGGTGYLKGMDVERAYRDAKICTIYEGTN 366

Query: 448 NAMVLDVLNLL 458
               + + + +
Sbjct: 367 EIQRVVIASHI 377


>gi|156741097|ref|YP_001431226.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156232425|gb|ABU57208.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 388

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 133/378 (35%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P     D+ E  P    +LR++   GL    +   +         + +    +       
Sbjct: 26  PIAREIDEEERVP--FEMLRKAADLGLLGVPFPEEYGGSEAGITGYCVLLEEVNRKCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   +  + L  TP   + +               P+ +  +     LTE   
Sbjct: 84  GTIIGAHTQLCSMSIHLAGTPDQKERYL-------------RPLIEGRMWGAWALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A I +   +  D      G  W  +   +D  ++ A  +  +G   +   + +   
Sbjct: 131 GSDAAHIRTTAVRDGDSWVLNGGKMWITNGSFADVIVVFANTDPSLGPRGITAFIVEKGF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +++ K+G R++ T  + F +        L            L  LD     +  
Sbjct: 191 PGFKVGKVEPKMGLRASHTASIFFEDCRVPAANVLGEVGRG--YALALQTLDIGRCGLGA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  A+     ++ YA  R   G  + D   ++  +AD+A+ I     + +  A   D 
Sbjct: 249 ACLGAAKEAYELSLKYAVERQQFGRPIADFQAIQFKLADMAVKIYTMEQIVYDCAKKVDR 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++       AR+ + I K +C      ++ EA++  GG G+  E  + R YR++    I
Sbjct: 309 GET-------ARLESSIVKLYCTDALAWILDEAIQIHGGMGFSRELPLERMYRDARVFRI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       + + L K
Sbjct: 362 YEGTNEIQRYVIASELLK 379


>gi|331003594|ref|ZP_08327091.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412435|gb|EGG91826.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 380

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 132/377 (35%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  DK    P    L       GL     D  +         KI A           
Sbjct: 26  PRAEEIDKSSKFP--KDLFLEMTKMGLTGIGTDEKYGGSGGSDIEKIIAVEEIAKHCAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     AS++    T    + + P + S                     LTE   G
Sbjct: 84  AATLSIHTIFASVLDKFGTEEQKQKYLPDVCSG-------------GELGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  +  +          Y L+G K F++    +   ++ A     +    +  +L +  
Sbjct: 131 SDAGSARTTAIYDESKEEYVLNGTKCFITGGGLAKYVLVFALTSPELKTKGLSCILVERG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    ++++K+G   + T EL F N     G L+G L               +  A  
Sbjct: 191 TPGFSIGKIEDKMGLHGSETAELIFDNCRVPKGNLIGPLGKGFKIAMTALDGARIGIAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V     +L E+I Y + R   G  +     ++  +A++A  +  A  +++R A+     
Sbjct: 251 AVGIAAGALDESIKYTKERVQFGRPISSLQGLQWYLAEMATKVECARWMTYRAASLKVSG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              ++EAA       I K+   K A  V  +A++  GG GY+ E  + R YR++    I 
Sbjct: 311 LPHTKEAA-------IAKFNASKTAVEVTDKALQLHGGYGYMREYPLERMYRDAKITEIY 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 364 EGTSEIHKVVIAREVLK 380


>gi|30265366|ref|NP_847743.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530908|ref|YP_022257.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188177|ref|YP_031430.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|165871314|ref|ZP_02215963.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167635755|ref|ZP_02394065.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167640445|ref|ZP_02398709.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170688210|ref|ZP_02879421.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170708025|ref|ZP_02898473.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177651849|ref|ZP_02934432.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190569118|ref|ZP_03022017.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227818105|ref|YP_002818114.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229601004|ref|YP_002869557.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687216|ref|ZP_05151074.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254724697|ref|ZP_05186480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735271|ref|ZP_05192980.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254755812|ref|ZP_05207844.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254762152|ref|ZP_05213998.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30260044|gb|AAP29229.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47506056|gb|AAT34732.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182104|gb|AAT57480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164712981|gb|EDR18509.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167511665|gb|EDR87047.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167528864|gb|EDR91621.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170126998|gb|EDS95877.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170667903|gb|EDT18655.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082553|gb|EDT67617.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190559786|gb|EDV13772.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227006065|gb|ACP15808.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229265412|gb|ACQ47049.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 376

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 133/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L++    GL        +        ++ +    +  ++      L   +    + + 
Sbjct: 39  EILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  K+ + EY                  LTE   G+D  ++ S+  K  D
Sbjct: 99  YFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +  +I+ A      G   +   + +    GL   + ++K+G   
Sbjct: 146 HYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLG 205

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI 
Sbjct: 206 SRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAID 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  + +Q  +   +AD+A  + AA  L +R A+   +     +E       A
Sbjct: 263 YAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE-------A 315

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +   
Sbjct: 316 SIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRA 375

Query: 458 L 458
           L
Sbjct: 376 L 376


>gi|18311282|ref|NP_563216.1| butyryl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|110801111|ref|YP_696974.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110802678|ref|YP_699561.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101]
 gi|168205130|ref|ZP_02631135.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|168211629|ref|ZP_02637254.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|168213211|ref|ZP_02638836.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|168216735|ref|ZP_02642360.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
 gi|169347121|ref|ZP_02866063.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|18145965|dbj|BAB82006.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|110675758|gb|ABG84745.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110683179|gb|ABG86549.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101]
 gi|169296804|gb|EDS78933.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|170663276|gb|EDT15959.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|170710390|gb|EDT22572.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|170715210|gb|EDT27392.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|182381237|gb|EDT78716.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
          Length = 379

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 145/377 (38%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  E  P     +++    G+    + + +        ++ +    L  +    
Sbjct: 26  PIAAEIDVTERFPM--ENVKKMAKLGMMGIPFSKEYGGAGGDTLSYILTVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    TP   + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCASLIDQFGTPAQKEKYL-------------TPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  ++D FI+ A  +   G   +   + + +
Sbjct: 131 GTDAAGQQTTAVLEGDN-YILNGSKIFITNGGVADTFIIFAMTDKSQGTRGISAFIVEKN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L+ K+G R+++T EL   N        +     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EA+ Y + R   G  L     ++  +A++   I AA  L ++ A   +E 
Sbjct: 250 ALGIAEGALEEAVAYMKERKQFGRSLSAFQGLQWMVAEMDTKIEAARFLVYKAACLKEEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 KPYSIDAARA-------KLFAADVAMEVTTKAVQLFGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|73539259|ref|YP_299626.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72122596|gb|AAZ64782.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 597

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 145/545 (26%), Positives = 226/545 (41%), Gaps = 33/545 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G + Y++D  L AL+     A+  +++   LE +GE        ELA  A+ N P
Sbjct: 22  VPDRKGGSLYTADPDLRALLPLYLPADLLNLLQPHLERMGELAGG-VLDELALTADQNPP 80

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            L      G    +V  HPA+  L R +  + GL             +      + A  Y
Sbjct: 81  TLTHRTRSGIDQQRVHKHPAYVELERVAFSEFGLAAVSHRGGVFGWDKPMPPAAKYALTY 140

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++ Q E G     S+T +    L     P + + + P + ++ ++   +  M        
Sbjct: 141 MLVQAEFGLCCPLSMTDSLTRTLRKFGDPALVEKFLPNLTTQVFEDLYQGAMF------- 193

Query: 200 LGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--- 254
             +TE+  G+D+AA  ++  +    +G + LSG KWF S+P +   ++LA+VE   G   
Sbjct: 194 --MTEQGAGSDVAATATRAMRDPQAEGGWRLSGDKWFCSNPDAALAMVLARVEDEAGNAV 251

Query: 255 -------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                   FL+PR L DGS N     RLK+K+G RS A+ E+       +L+G+L     
Sbjct: 252 PGHKGVSLFLLPRTLSDGSANQYRIIRLKDKLGTRSMASGEIRLEGASAYLVGELGRGFV 311

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM     L + + +   MR +L E +  A  R   G  L D P+M+R +  + L   
Sbjct: 312 QMADMINNSRLSNGVRAAGLMRRALTEGLFIAHERKAFGKRLEDMPLMRRQLLKLTLPTE 371

Query: 368 AATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  + F+ A +   A +  + A    RI+ P+ K+  C+ A  V  +AME  GG GYIE
Sbjct: 372 QARTMVFQTAEALRRADAGEDGAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCGYIE 431

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVI 484
           E S AR  R++   SI  G+ N + LDVL  + +  +L       S L  D         
Sbjct: 432 EWSDARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSLPALRAHLSGLLADTPLHPTARA 491

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           T               A    E   LA  AA+        +A  +   R           
Sbjct: 492 TFEAAIERAAAFAASAAEAGAEGDLLARQAASGLYNVTTAVAMAWEAGRIGSVRRMRLAQ 551

Query: 545 LHGRF 549
           L  R 
Sbjct: 552 LVLRH 556


>gi|255524283|ref|ZP_05391241.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296185242|ref|ZP_06853652.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255511966|gb|EET88248.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296050076|gb|EFG89500.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 379

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 139/377 (36%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +P     + +    G+    + + +          I A      A   +
Sbjct: 26  PIATEIDETERYPM--ETVEKMSKYGVMGMPFPKEYGGSGTDYISYIIAVEELAKACATS 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +     +    T      + P + S                    GLTE   
Sbjct: 84  SVILSGHTSLCCWPIYAFGTEDQKNKFLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   S      D  Y L+G K F+++  +++ F++ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQSTAVLEGDH-YILNGSKIFITNGGVAETFVVFAMTDRSKGTKGISAFVIEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MPGFSIGKVEDKLGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  A+ Y + R   G  +     ++  IAD+ + + AA  L F+ A      
Sbjct: 250 ALGIAEGALDAAVAYMKERKQFGKPISAFQGLQWYIADMKVRVEAAHYLVFKAAWKKQSD 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + +AA         K +  + A  V  +A++ +GG GY ++  + R  R++    I 
Sbjct: 310 MPYTIDAA-------EAKLYAAETAMYVTTKAVQILGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L +
Sbjct: 363 EGTSEVQKMVIAGSLLR 379


>gi|237741753|ref|ZP_04572234.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|294785633|ref|ZP_06750921.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|229429401|gb|EEO39613.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|294487347|gb|EFG34709.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 381

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 147/381 (38%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDEEERFPI--ETVEKMAKIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGTEKQKQKYLPKLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   ++ ++++A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R ++T EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 NTPGFSIGKKEMKLGIRGSSTCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IAAQALGIAAGALGEAINYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANVIK 381


>gi|228994061|ref|ZP_04153962.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228765709|gb|EEM14362.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 381

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 134/362 (37%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
             +L++    GL        +  V       I A           G +++   +   + +
Sbjct: 43  REILKKMGELGLMGIPAPAKYGGVEMDFISYILAIEELSKVSATIGVILAVHTSVGTNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKQG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISAFIVEKDTPGLIVGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +    +    N+     +  K+ +  LD   + +    + +AE     A+
Sbjct: 210 GSRTVQLTFEDMKVPV---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAV 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKERQQFGKPIAAQQGLGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVDVAIEAVQVFGGYGYTKDYPVERFFRDAKICEIYEGTSEIQRLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|257469157|ref|ZP_05633251.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|317063404|ref|ZP_07927889.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
 gi|313689080|gb|EFS25915.1| acyl-CoA dehydrogenase [Fusobacterium ulcerans ATCC 49185]
          Length = 381

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 133/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 26  PLAAEVDEEERFPV--ETVKKMAEIGLMGIPIPKQYGGAGGDNIMYAMAVEELSRVCGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILHFGTEEQKQKYIPKLASGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + ++G K F+++   +D +++    +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAVLDETTNEWIINGSKIFITNAGYADVYVIFGMTDRSKGLKGISAFILET 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G    + + K+G + ++T EL F N        L  V  G    M  L    +  A 
Sbjct: 191 GTPGFSIGKKEKKLGIKGSSTCELIFENVRIPKSNLLGEVGKGFKIAMMTLDGGRIGIAS 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  +      +  +AD+ + I A+  L ++ A     
Sbjct: 251 QALGIAQGALDETVGYVKERKQFGRAIAKFQNTQFQLADLEVKIEASRLLVYKAAWKESN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 311 NLPYTVDAARA-------KLFAAETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEI 363

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 364 YEGTSEVQRMVIAGNLLK 381


>gi|23100466|ref|NP_693933.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778699|dbj|BAC14967.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 382

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 148/375 (39%), Gaps = 36/375 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGH 150
           ER +  +  P    L+++    GL       ++          I+    +   +      
Sbjct: 28  ERMESEDRFP--KELIQKMGELGLMGIPIPEAYGGSGMSYTSYIQVIHEISKFSATLGVI 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   +    + +    T    + + PK+   EY                  LTE   G+D
Sbjct: 86  LSVHTSVGTNPILYFGTEDQKQRFIPKLAKGEY-------------LGAFALTESGSGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +++ +   K+ D +Y L+G K F+++   +D +I  A+         +   + +    G
Sbjct: 133 ASSMKTTA-KLIDDMYVLNGSKVFITNGGEADTYITFART--GDSPKDISAFIVEKDAPG 189

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
               + + K+G   + TVE+ F N     +   N+     +  KI +  L+   + ++  
Sbjct: 190 FIIGKKEKKMGLHGSNTVEIIFENCR---IPKENLLGERGKGFKIAMANLNIGRIGIAAQ 246

Query: 329 RVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +AEA     + YA+ R   G  +     +   +A++A ++ +A  L+++ A   +  
Sbjct: 247 GLGIAEAALNYAVTYAKEREQFGKPIAANQGISFKLAEMATNVESAKLLTYQAAALIEAG 306

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +EA+ A++MA        K A     EA++  GG GY +E  + R +R++    I 
Sbjct: 307 KQCGKEASMAKMMA-------TKTAMNNAIEAVQVFGGYGYTKEYPVERLFRDAKVTEIY 359

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 360 EGTNEIQHIVIAKHL 374


>gi|206975925|ref|ZP_03236836.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|206746019|gb|EDZ57415.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
          Length = 376

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 131/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A    +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAAWLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|296505766|ref|YP_003667466.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|296326818|gb|ADH09746.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis BMB171]
          Length = 376

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|52140220|ref|YP_086611.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus E33L]
 gi|51973689|gb|AAU15239.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus E33L]
          Length = 376

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 139/363 (38%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++   +  +I+ A      G   +   + +    GL   + ++K+G 
Sbjct: 145 D-YYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGL 203

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----A 335
             + TV+L F +         N+     +  K+ +  LD   + +    + +AE     A
Sbjct: 204 FGSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACA 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E      
Sbjct: 261 IDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------ 314

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L + 
Sbjct: 315 -ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVIS 373

Query: 456 NLL 458
             L
Sbjct: 374 RAL 376


>gi|225620820|ref|YP_002722078.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
 gi|225215640|gb|ACN84374.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
          Length = 367

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 136/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 12  PLATELDEEERFPV--ETVKKMAEIGLMGIPIPKEYGGAGGDNLMYAMAVEELSRVCGTT 69

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 70  GVILSAHTSLGTWPILQFGTEAQKQKYVPKMASGEW-------------LGAFGLTEPNA 116

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + ++G K F+++   ++ +++ A  +   G   +   + + 
Sbjct: 117 GTDAAGQQTVAVLDEATNEWVINGSKIFITNSGYANVYVIFAMTDKSKGLKGISAFIVES 176

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
           +  G    + + K+G R +AT EL F N        L  +  G    M  L    +  A 
Sbjct: 177 TTPGFTVGKKEKKLGIRGSATCELIFENARIPKDNLLGELGKGFKIAMMTLDGGRIGIAS 236

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  + +    +  +A++ + + AA  L ++ A     
Sbjct: 237 QALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEAARLLVYKAAWRESN 296

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 297 HLPYSVDAARA-------KLFASETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEI 349

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 350 YEGTSEVQRMVIAGSLLK 367


>gi|310827112|ref|YP_003959469.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612]
 gi|308738846|gb|ADO36506.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612]
          Length = 641

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 146/372 (39%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMS 153
           DK    P     +R+    G+    +++ +        ++ I    L  +       L +
Sbjct: 33  DKENMFPD--EAIRQLGAMGVMGIPFEKEYGGQGLDVLSYAIAVEELSRVDGGTGVILSA 90

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +A        + +               P+ K       GLTE   G+D   
Sbjct: 91  HTSLGTWPIAAFGNEAQKQKYLI-------------PLCKGEKIGAFGLTEPNAGSDAGG 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G+K F+++ P +D +++ A     +G   +   + +    G  +
Sbjct: 138 TETTAIDKGDH-YLLNGNKIFITNAPKADTYVIFAVTTPDIGTRGISAFIVEKGWEGFTF 196

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS++T EL F++         N+     +  KI +  LD   + ++   + 
Sbjct: 197 GDHYDKLGIRSSSTAELVFNDVKVP---KENLLGEEGQGFKIAMATLDGGRIGIASQALG 253

Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A     EA+ YA+ R   G  +  Q  +   IAD+A  +  A  L ++ A   +  +  
Sbjct: 254 IAQGAFEEAVAYAKERVQFGKPIGFQQAISFKIADMATKLHTARLLIYQAAELKEYHEPY 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  V  +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 314 GMESAMAKQ-------YASDIALEVTNDALQIFGGTGYLKGMEVERMYRDAKITTIYEGT 366

Query: 447 GNAMVLDVLNLL 458
                + + + +
Sbjct: 367 NEIQRVVIASHI 378


>gi|167629177|ref|YP_001679676.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167591917|gb|ABZ83665.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 379

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 142/365 (38%), Gaps = 32/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            +L  R    GL    +  S+        ++ I    L  +       L + +   A  +
Sbjct: 39  RSLWDRMAQLGLTGIPFSDSYGGAGMDNLSYIIAVEELSRVCASSGVLLSAHTSLCAWPI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ +       GLTE   G+D  ++ +  ++  
Sbjct: 99  DAFGTEGQKQKYLN-------------PLAEGRSVGAFGLTEPGAGSDAGSLKTIARRDG 145

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y L G K F+++   +D ++++A  +           + +    G  + + ++K+G 
Sbjct: 146 DD-YILDGTKIFITNGEWADIYVVIASTDPAKKHRGTTAFIVEKGTPGFSFGKKEHKMGI 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335
           R++ T EL F N         N      +  KI ++ LD   + ++   + +A     +A
Sbjct: 205 RASYTYELIFENCRIPA---ENRLGEEGQGFKIAMMTLDGGRIGIAAQALGIAQGAFDQA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  +     ++  +AD+A  I AA  L ++ A   D     S+++A A  
Sbjct: 262 LAYSKTREQFGKPISANQGLQWMLADMATAIEAARLLVYQAAYLKDAGLPYSKQSAMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  ++A AV  +A++  GG GY  E  + R  R++    I  G+       + 
Sbjct: 320 -----KLYASEVAMAVTTKAVQIHGGYGYTREYPVERMMRDAKITEIYEGTSEIQRTVIA 374

Query: 456 NLLEK 460
             L K
Sbjct: 375 AALLK 379


>gi|154686674|ref|YP_001421835.1| MmgC [Bacillus amyloliquefaciens FZB42]
 gi|154352525|gb|ABS74604.1| MmgC [Bacillus amyloliquefaciens FZB42]
          Length = 377

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 136/364 (37%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+++    GL       ++          I A           G ++S   +  ++  L
Sbjct: 38  RLIKKMGEAGLMGIPVPETYGGAGADTTSYILAIHEISKVSAAVGVILSVHTSVGTIPIL 97

Query: 165 M-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                  LTE + G+D   + +   +   
Sbjct: 98  HFGTEAQKQTYIPKLAAGEY-------------IGAFALTEPQSGSDAGGLKTTAVRKG- 143

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F+++  + D ++  A  +   G   +   + + +  G    + + K+G  
Sbjct: 144 GSYILNGSKIFITNGGAADLYLTFAITDPGKGRKGISAFIVEKNTPGFSVGKKEKKLGLL 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----I 336
            + TVEL+F       +   N      E   I +  LD   + ++   + + EA     +
Sbjct: 204 GSNTVELQFDQA---EIPIENRLGEEGEGFSIAMKNLDVGRIGIAAQALGIIEAALGCSV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +     +   ++D+A +  A   L +  A+ +       +EA+ A+  
Sbjct: 261 EYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHAADLYQRGLPCGKEASMAKQ- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +    A     EA++  GG GY++E    R +R++    I  G+     L +  
Sbjct: 320 ------FASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISK 373

Query: 457 LLEK 460
            L +
Sbjct: 374 YLLQ 377


>gi|212696807|ref|ZP_03304935.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325847079|ref|ZP_08169905.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212676097|gb|EEB35704.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481051|gb|EGC84096.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 643

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 137/359 (38%), Gaps = 32/359 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++     G     + + +        ++ I    L  +         + +   +  + 
Sbjct: 40  EIVKEMGELGFLGIPYPKKYGGQGLDVMSYAITVEELSRVDGGVGVICSAHTSLGSWPIF 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K +               P+ K       GLTE+  G+D     +  +   D
Sbjct: 100 AFGTEEQKKKYL-------------TPLAKGEKIGAFGLTEENAGSDAGGTETTAELDLD 146

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++ P +D +++ A     +G   +   + +    G       +K+G 
Sbjct: 147 GERYILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGI 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----A 335
           RS+ T EL F N         N+     +  KI +  LD   + ++   + +A+     A
Sbjct: 207 RSSCTAELHFDNVKVP---KENLLGKEGQGFKIAMATLDGGRIGIASQALGIAQGAYESA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +         +AD+A  + AA  + +  A   +  +  S +AA A+ 
Sbjct: 264 LSYAKEREQFGMPIAHLQANTFKLADMATYLKAARLMIYSAAEMKENHERYSADAAMAKQ 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                  +   +A  +  EA++  GGSG+I+   + R YR+S    I  G+   M + V
Sbjct: 324 -------FASDLASKITNEALQMYGGSGFIKGIDVERFYRDSKITQIYEGTNEIMRVVV 375


>gi|111019931|ref|YP_702903.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819461|gb|ABG94745.1| probable AidB protein [Rhodococcus jostii RHA1]
          Length = 571

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 144/521 (27%), Positives = 231/521 (44%), Gaps = 34/521 (6%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   ++     L+ LG          LA  A+ N P L  + 
Sbjct: 1   MNFAHTDPALRAVVDRWTAPSDRDKLNTLLDRLGADAGDR-LDALAATADKNPPVLQQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
             GER D++ +HP++  L R +  + GL                 H ++    Y+  Q E
Sbjct: 60  RDGERIDRIAYHPSYQELCRAAYSEYGLSALSHRGGLHGWDDVPPHLVKYLASYVFVQAE 119

Query: 148 AGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T  +A  + +   P V   W   + S              ++   + +TE 
Sbjct: 120 FGLACPVSMTDAAARTLRMFGDPDVFGPWIDALTST---------APDGAMTGAMFMTEP 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLV 258
           + GTDIA   ++  +  D  + L+G KWF S+P +D  + LA+  G        VG F+V
Sbjct: 171 QAGTDIARTETRAVRDGDA-WRLTGKKWFASNPDADVIVTLARFPGGDDQSTRGVGMFMV 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P++L +G  N     RLK+K+G RS  + E+  +  +   +G+L+     + +M     L
Sbjct: 230 PKVLANGERNSYTIDRLKDKLGTRSMPSGEVSLTGAYAQQVGELDRGFRQMAEMVNTSRL 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A+ S + MR ++ +A+ + R R V G  L DQP+M+  +  +ALD  AA AL    A 
Sbjct: 290 SNAMRSSALMRRAVRDAVDHTRERVVFGKALFDQPLMRATLLPLALDAEAALALVAYSAQ 349

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               A +  + A A  R++ P+ K++ CK A  V  EAME  GG+GYIEE + AR  R++
Sbjct: 350 CLQAADAGDDSAHALIRVLTPLAKHYICKRARIVTGEAMEVRGGNGYIEEWAHARLVRDA 409

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
              SI  GS N + LDVL  + K        +    +   LG        +LR       
Sbjct: 410 HLGSIWEGSSNVIALDVLRCMRKLGAHRRLAETMHGILAGLGPDCGTGADVLRRRWDDLV 469

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
           E+  L     +  A A  A    R   N++A   +     D
Sbjct: 470 EEGDLLVAGDDDTAQAGCA----RYA-NELARAAMATLLYD 505


>gi|301631397|ref|XP_002944784.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis]
          Length = 565

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 148/537 (27%), Positives = 233/537 (43%), Gaps = 35/537 (6%)

Query: 30  LFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
              G N Y+ D+ L  L+A +        +    E LG         ELA  A+ N P L
Sbjct: 15  DRHGQNLYTVDAELQRLLALYLPDGLRRHMAPHFERLGHLAGGR-LDELAAAADRNPPVL 73

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLM 143
            +    G    ++  HPA+  +   ++ +    SI  R        +    ++    YL 
Sbjct: 74  ESRTRTGLDVQRIVKHPAYVEMEHLALSEFAMGSISHRDETFGWQGRMPPAVKYVLFYLF 133

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +P +   +  ++ S ++D   +  M          
Sbjct: 134 VQAEFGLCCPVSMTDSLTRTLKKFGSPELVGRFLARLTSLDFDELAQGAMF--------- 184

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255
           +TE+  G+DIAA T+  +  ++G + LSG KWF S+P +D  ++LA+V+G       V  
Sbjct: 185 MTEQAAGSDIAATTTLARAGANGTWLLSGDKWFCSNPDADFAMVLARVDGGPPGMKGVSL 244

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G+       V DM   
Sbjct: 245 FLLPRRLEDGSLNHYHIVRLKDKMGTRSMASGEIRLQGAVAYLVGEQGRGFVQVADMVNN 304

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR ++AEA H A  R   G  L D P+M+R I  + +    A  + F+
Sbjct: 305 SRLSNGVRAAGLMRRAVAEAEHVASERRAFGKRLQDMPLMQRQIDKLRVPAEQARTMMFQ 364

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A +   + +  + A A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 365 TALALQRSDAGEDGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWSDPRLV 424

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT-----ILRD 489
           R++   SI  G+ N + LDV+  + +   L   L  T  Q L       +       LR 
Sbjct: 425 RDAHLGSIWEGTSNIVALDVVRAIRREGALP--LLRTHAQALLDDPAITLAPAFTLALRQ 482

Query: 490 SIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           ++   C   +  A+   E   LA  AA+      + +A  +   R           L
Sbjct: 483 ALDGACALAQTAAQEGGE--VLARQAASALYHSTSAMAMAWEAARTGSAARMRWAQL 537


>gi|49481208|ref|YP_039335.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|196036517|ref|ZP_03103912.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|218906521|ref|YP_002454355.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|300117856|ref|ZP_07055623.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|49332764|gb|AAT63410.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|195990850|gb|EDX54823.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|218535888|gb|ACK88286.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|298724720|gb|EFI65395.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 376

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|118098887|ref|XP_415303.2| PREDICTED: similar to LOC446287 protein [Gallus gallus]
          Length = 586

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 136/552 (24%), Positives = 229/552 (41%), Gaps = 57/552 (10%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKE----LELLGEYVL 66
           M    + +++LF   Q     G N Y  D+LL + + A+ P  V +E    LE  G  +L
Sbjct: 1   MPVARREAETLF---QERPEPG-NQYLEDALLRSYLEAHLPPKVLEEVSQELEGFGNRLL 56

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   + L      N P    Y   G+R D +    AW  +   +  +GL    ++R +  
Sbjct: 57  TK-IRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLIAEAYERRYSN 115

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             R      +A +LYL +    G       +  +A ++  + TP   K+    + SR+  
Sbjct: 116 WSR----VYQAVKLYLFSTASGGFNCPLAMTDGAAKVIESLGTPASLKNAFDHLTSRD-- 169

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                   +     G  +TE+RGG+D+A    +  +K  DG Y L G KWF S+  SD  
Sbjct: 170 -------PRKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYRLYGFKWFTSAADSDMA 222

Query: 244 IMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           + LA++           G +  F +    E+   N +  QRLK K+G R  AT EL  + 
Sbjct: 223 LTLARIVDAEGHVKQGSGGLSLFFLRVRDEEEKLNSIQVQRLKEKLGTRQMATAELWLNG 282

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+         + +M  +  + + I +V+ MR  ++ +  YA +R V G +L D P
Sbjct: 283 AKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSREYALKRVVFGKLLKDHP 342

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKYWCCKMAPA 410
           +  + IA + +    A  L   +      A++     ++    R++ P+ K +  K A A
Sbjct: 343 LHMQTIARMEVQTRGAFLLLMEMVRLLGLAETNMASEQDQLLLRLLVPVAKLYTGKQATA 402

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLF 469
           V  EAME  GG GY+E+  +    R++   SI  G+ N + LDVL  L K    +    F
Sbjct: 403 VATEAMESFGGQGYMEDTGLPVIVRDALVLSIWEGTTNVLSLDVLRSLTKSQGQVMAVFF 462

Query: 470 STLEQDL-----GSSGKKVITILRDSISL------------CKEDKGLARFLTEKIALAS 512
           ST++  L      +  +  +  +RD+                   +  AR  +  +A   
Sbjct: 463 STVQNKLELASSSAELQPAVQWVRDAAGRLTRFCQGAAAEGAAPMELAARDFSYSLARIY 522

Query: 513 SAAALYRAGMND 524
           + A L       
Sbjct: 523 AGALLIEHAARP 534


>gi|218232874|ref|YP_002370119.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218160831|gb|ACK60823.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 381

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPTKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|326943140|gb|AEA19036.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 376

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGDLGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY +E  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKEYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|229496680|ref|ZP_04390394.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316577|gb|EEN82496.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas
           endodontalis ATCC 35406]
          Length = 379

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G+        +       Q + +    L  +    
Sbjct: 26  PLAAEIDEQERFPI--ETVKKMAKLGIMGIPIPTQYGGAGATNQMYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +    + +    T      + PK+ S E+                 GLTE   
Sbjct: 84  GVVVSAHTSLCCAPILEHGTEEQKMKYLPKLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  +      D  + L+G K F+++   +  +I+ A  +   G   +   + +  
Sbjct: 131 GTDASAQQTFAVDNGDH-WVLNGTKIFITNAEYAHVYIIFAMTDKSQGNHGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R +AT EL   N        L  +  G    MK L    +  A  
Sbjct: 190 MPGFSIGKKELKLGIRGSATCELIMENCIVPKENLLGKIGGGFKIAMKTLDGGRVGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   R ++ E + Y + R   G  +      +  +AD+   I  A  L  R +   D  
Sbjct: 250 AVGIARGAMDETVKYTKERKQFGRSIAKFQNTQFQLADLQTRIECAQLLIRRASWLKDAQ 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S  AA         K +C + A  V  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 LPYSVAAA-------EAKLFCAETAMEVTTKAVQFHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 363 EGTSEVQRMVISANLLK 379


>gi|256544645|ref|ZP_05472017.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
 gi|256399534|gb|EEU13139.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170]
          Length = 643

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 32/359 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++     G     + + +        ++ I    L  +         + +   +  + 
Sbjct: 40  EIVKEMGELGFLGIPYPKKYGGQGLDVMSYAITVEELSRVDGGVGVICSAHTSLGSWPIY 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K +               P+ K       GLTE+  G+D     +  +   D
Sbjct: 100 AFGTEEQKKKYL-------------TPLAKGEKIGAFGLTEENAGSDAGGTETTAELDLD 146

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++ P +D +++ A     +G   +   + +    G       +K+G 
Sbjct: 147 GKRYILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGI 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----A 335
           RS+ T EL F N         N+     +  KI +  LD   + ++   + + +     A
Sbjct: 207 RSSCTAELHFDNVKVP---KENLLGKEGQGFKIAMATLDGGRIGIASQALGIGQGAYESA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +         +AD+A ++ AA  + +  A   +  +  S +AA A+ 
Sbjct: 264 LAYAKEREQFGMPIAHLQANTFKLADMATNLKAARLMIYSAAELKENHERYSADAAMAKQ 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                  +   +A  +  EA++  GGSG+I+   + R YR+S    I  G+   M + V
Sbjct: 324 -------FASDLASKITNEALQLYGGSGFIKGIDVERFYRDSKITQIYEGTNEIMRVVV 375


>gi|228911182|ref|ZP_04074987.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228848358|gb|EEM93207.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 381

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A     VG   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPDVGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|313888931|ref|ZP_07822591.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845104|gb|EFR32505.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 645

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 32/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++   +G     +        +   ++ I    L  +       L + +   +  + 
Sbjct: 42  EIIKKIGENGWMGLPYPEEEGGAGKDVISYAIAVEELSRVDAGVGVVLSAHTSLGSYPIQ 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P+ +       GLTE   G+D     +      D
Sbjct: 102 AFGTKEQKEKYLK-------------PLAQGKKLGAFGLTEPNAGSDAGGTETTAVLDGD 148

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G+K F+++ P +D +++ A     +G   +   + +    G  +    +K+G R
Sbjct: 149 -YYILNGNKIFITNAPAADTYVVYAVTTPGIGTHGISAFIVEKGWEGFTFGDHYDKLGIR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AI 336
           S+ T EL+F+N         N+     +  +I +  LD   + ++   + +A+     A+
Sbjct: 208 SSTTAELQFNNVKVP---KENLLGKEGQGFRIAMQTLDGGRIGIASQALGIAQGAFEAAL 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   IAD+A  I AA  + +  A      ++ S EAA A+ +
Sbjct: 265 AYAKERVQFGRPIAQQQAVAFKIADMATKIRAARLMVYSAAEMKQNHENYSMEAAMAKTV 324

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A  V+ EA++  GG+GY++   + R +R++   +I  G+     + V +
Sbjct: 325 A-------SEVAMWVVNEALQIHGGNGYLKGMDVERFFRDAKITTIYEGTSEIQRVVVAS 377

Query: 457 LL 458
            L
Sbjct: 378 HL 379


>gi|323366578|gb|ADX43863.1| CarC [Acetobacterium woodii]
          Length = 352

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 28/340 (8%)

Query: 128 VRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                H      +   A++    + +L SP+  +   + L  T    + +   I +    
Sbjct: 33  GSGGDHMSYVICMEEFARVSGVASVYLSSPNSLAGGPLLLSGTEEQIEKYLKPIITG--- 89

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAF 243
                        +   LTE   G+D   +++    + D  Y L+G K F++ +P+ D  
Sbjct: 90  ----------KKKLAFALTEPGAGSDAGGMSTTAVDMGD-YYLLNGRKTFITMAPLCDDA 138

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+ +   G   +   + D    G+   + ++K+G    AT ++   +        L 
Sbjct: 139 VIYAKTDMSKGTRGISAFIVDLKSEGVSMGKNEHKMGLIGCATSDIIMEDVKVPKENRLG 198

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            V+ G    MK L    L  A  S+   + +L EAI YA+ R   G  + D   +   IA
Sbjct: 199 EVNKGFSNAMKTLDVGRLGVASQSIGVAQGALDEAIKYAKERKQFGKRIADFQAIAFMIA 258

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L +  A+  D  K+ ++EA+ A       K++  ++   + A+A++  G
Sbjct: 259 DMATKLEAAKLLVYNAASLMDNKKNATKEASMA-------KFYASEICNEICAKAVQIHG 311

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GYI+E  + R YR+    +I  G+     + +  +L K
Sbjct: 312 GYGYIKEYKVERMYRDCRVFTIYEGTSQVQQMVISGMLLK 351


>gi|30023373|ref|NP_835004.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
 gi|29898934|gb|AAP12205.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC
           14579]
          Length = 381

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KDILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLMAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|167567257|ref|ZP_02360173.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 589

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 139/516 (26%), Positives = 229/516 (44%), Gaps = 35/516 (6%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+           +  EL  LG    S     LA  A+ N P 
Sbjct: 19  PDSRGVNFFTSDPDCAALLRLHLGDARYRALEPELRALGLRA-SDELDRLASRADKNPPV 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           LH     GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 78  LHPRTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPP-----LVKYALTFLF 132

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D  ++  M          
Sbjct: 133 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF--------- 183

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 184 MTEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVK 243

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 244 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMAD 303

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 304 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARS 363

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 364 LFMQIALLLSKADAGDGQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 423

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF-EQLFSTLEQDLGSSGKKVITILRD 489
           AR  R++   SI  G+ N + LDV   +++   L   + F     D         T LR 
Sbjct: 424 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDLLDAARLPDASATRLRR 483

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           ++    +            AL   AA+        I
Sbjct: 484 ALDRASDALERVAQ-AGDDALVRQAASALYHATTAI 518


>gi|167752786|ref|ZP_02424913.1| hypothetical protein ALIPUT_01047 [Alistipes putredinis DSM 17216]
 gi|167659855|gb|EDS03985.1| hypothetical protein ALIPUT_01047 [Alistipes putredinis DSM 17216]
          Length = 379

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+    +  ++         + +    L  +    
Sbjct: 26  PLAAEIDEEERFPV--ETVEKMAKLGIFGIPFPVNYGGAGGNNILYSMAVEELSRVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    T      + PK+ S E+                 GLTE   
Sbjct: 84  GVVVSAHTSLCAAPIYEHGTEEQKMKYLPKLCSGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD AA  +      D  Y L+G+K F+++   +  +I++A  +   G   +   + +  
Sbjct: 131 GTDAAAQQTTAVDAGDH-YILNGNKIFITNAAYAHVYIVMAMTDKSQGTRGISAFIVERD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R +AT EL F N        L  V  G    MK L    +  A  
Sbjct: 190 FPGFSIGKKEKKMGIRGSATCELIFENCIVPKENLLGKVGKGFSIAMKTLDGGRVGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ E + Y + R   G  +      +  +AD+   I AA  L    A   D+ 
Sbjct: 250 ALGIAQGAMDETVKYVKERKQFGRTIGQFQNTQFQLADLDTKIEAARLLVRAAAFKKDQK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I 
Sbjct: 310 LPFSVDAARA-------KLFAAETAMEVTTKAVQFHGGYGYTREYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + + L K
Sbjct: 363 EGTSEVQRMVISSALLK 379


>gi|65317320|ref|ZP_00390279.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
          Length = 381

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 133/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L++    GL        +        ++ +    +  ++      L   +    + + 
Sbjct: 44  EILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  K+ + EY                  LTE   G+D  ++ S+  K  D
Sbjct: 104 YFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKGD 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +  +I+ A      G   +   + +    GL   + ++K+G   
Sbjct: 151 HYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLG 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI 
Sbjct: 211 SRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAID 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  + +Q  +   +AD+A  + AA  L +R A+   +     +E       A
Sbjct: 268 YAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE-------A 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +   
Sbjct: 321 SIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRA 380

Query: 458 L 458
           L
Sbjct: 381 L 381


>gi|323485654|ref|ZP_08090992.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum
           WAL-14163]
 gi|323401004|gb|EGA93364.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum
           WAL-14163]
          Length = 638

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 76/434 (17%), Positives = 157/434 (36%), Gaps = 45/434 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    PA    + +    GL    + + +            A          A
Sbjct: 26  PQAFLLDQNNEFPA--EAVEKLGKMGLMGIPYPKEYGGAGMDILSYAIAVEELSRVDGGA 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+     +    T    + +               P+ +       GLTE   
Sbjct: 84  GVILSAHVSLGSWPIFAFGTEEQKQKYL-------------VPLARGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +      D      G  +  ++P +D +++ A     +G   +   + +   
Sbjct: 131 GSDAGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGW 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G  +    +K+G RS++T EL F++         N+     E  KI +  LD   + ++
Sbjct: 191 EGFEFGDHYDKMGIRSSSTAELIFNDVKVP---KENLLGKEGEGFKIAMATLDGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ Y++ R   G  +  Q ++   +AD+A  +  A  L +  A   +
Sbjct: 248 SQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADMATKLRCARFLIYSAAELKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      E+A A+        +   +A  V  +A++  GGSGY++   + R YR++   +
Sbjct: 308 QHVPYGMESAMAKQ-------YASDIALEVTNDALQIFGGSGYLKGMEVERAYRDAKITT 360

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED---K 498
           I  G+     + + + +             + ++ G  G K +        L K+    +
Sbjct: 361 IYEGTNEIQRVVIASHI----------IGKMPKESGGGGAKHMKKPAPITGLRKKQILKE 410

Query: 499 GLARFLTEKIALAS 512
           G A+   + +  A 
Sbjct: 411 GKAQEKVDTLVAAL 424


>gi|284048812|ref|YP_003399151.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953033|gb|ADB47836.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 383

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 149/397 (37%), Gaps = 42/397 (10%)

Query: 73  LARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK- 130
            A  A     P +         WD+         L+ +    G     +   +  +    
Sbjct: 16  AAEFAEKFLAPTVEERDK-AHIWDR--------KLIDKMGEAGFCGICFPEEYGGMGLDV 66

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            ++ +    L  +       L +     A+ + +  T    + +              AP
Sbjct: 67  LSYILAVEELSKVDDGTGITLSANVSLCATPIYMFGTEEQKQKYL-------------AP 113

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           + + +     GLTE   GTD +A  +      D  Y L+G K F+++   +D +++ A  
Sbjct: 114 IAEGTHVGAFGLTEPSAGTDASAQQTTAVLKGD-KYILNGSKIFITNGKEADTYVVFAMT 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G  + ++++K+G  ++ T EL F +         N+     
Sbjct: 173 DKSQGVHGISAFILEKGMPGFRFGKIEDKMGGHTSITAELIFEDCEVP---KENLLGKEG 229

Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +  LD   + V+   + +AE     A+ Y++ R   G  +     ++  +AD+A
Sbjct: 230 EGFKIAMETLDGGRIGVAAQALGIAEGALAAAVKYSKEREQFGRSISKFQALQFMMADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +  A   +E K  SE AA A+        +   +A  V  +A++  GG G
Sbjct: 290 TKIEAARYLVYHAAMLKNEGKPYSEAAAMAKC-------FASDVAMEVTTDAVQIFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y  +    R+ R +    I  G+   M +     L +
Sbjct: 343 YTVDYPAERYMRNAKITQIYEGTNQVMRIVTSRALLR 379


>gi|328951154|ref|YP_004368489.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451478|gb|AEB12379.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 381

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 148/401 (36%), Gaps = 27/401 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     +     P    +D+ E  P    ++ +    GL  +I   
Sbjct: 4   DFSLTEEQKQLQALARRFARE--QIAPIAAEYDQKEEVP--WQIVEKLHEVGLLNAIIPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +      ++          +    +   S    + + L  T    + +        
Sbjct: 60  EYGGLGIGMLEEVIIGEELAWGCMGIYTIPMASDLGITPILLAGTHEQKERFL------- 112

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++ ++  D         W  +   +D 
Sbjct: 113 ------RPLTEKPALAAFALSEPGNGSDAAALRTRAERDGDYYILNGTKMWISNGGEADV 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V+       V  L+ +    GL   +L  K+G R++ T EL F N    +   L
Sbjct: 167 IVVFATVDPAKRHKGVVALVVEKGTPGLSAHKLHGKMGQRASGTYELVFENVRVPVANRL 226

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    +  A  SV   R +L EA  YA+ R   G  + D   ++  +
Sbjct: 227 GEEGEGFKIAMNTLNKTRIPVAAGSVGVARRALEEATKYAKEREAFGRPIADFQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + +  A   ++  A   D+    ++ +A       + K +  ++A     EA++  
Sbjct: 287 ADMYIGLETARMYTYYAAWLCDQGLPHAQASA-------VAKAYASEIAFKAANEAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY+ E  + +  R+   N I  G+     + +   L K
Sbjct: 340 GGYGYMHEYPVEKLLRDVKLNQIYEGTNEIQRVIIARNLLK 380


>gi|310825942|ref|YP_003958299.1| acyl-coa dehydrogenase [Eubacterium limosum KIST612]
 gi|308737676|gb|ADO35336.1| acyl-coa dehydrogenase [Eubacterium limosum KIST612]
          Length = 779

 Score =  299 bits (766), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 132/371 (35%), Gaps = 28/371 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G+    +   +        A+ +    +  +    
Sbjct: 425 PIAKDLDEKERFPE--ETIPKLAEAGMLGIPFPEEYGGAGMDNLAYAMCVEEISKVCGST 482

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A  +    T    + +               P+ K       GLTE   
Sbjct: 483 GVIISAHTSLCAWPIFAFGTEEQKRKYL-------------VPLAKGEHLGAFGLTEPGA 529

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 530 GTDAAGQKTTAVLEGDH-YVLNGSKIFITNGGKADTYVIFAMTDITKGNHGITAFIVEKD 588

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    +  +K+G R ++T EL F +        L  V  G    MK L    +  A  
Sbjct: 589 FPGFSIGKKLDKMGIRGSSTTELIFKDCIVPKENLLGEVGKGFKIAMKTLDGGRIGIASQ 648

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ E I Y + R   G  L      +  +A++      A  L ++ A + D  
Sbjct: 649 ALGLAQGAIDETIPYVKGREQFGQPLSAFQNTQFQLANMIARAEGARLLVYQAACAKDAG 708

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K           +A + K    ++A  V  EA++  GG G+  +  + R  R++    I 
Sbjct: 709 KPY-------NHLAALAKLVASEVARDVTCEAVQLFGGYGFTRDYPVERMMRDAKITEIY 761

Query: 444 LGSGNAMVLDV 454
            G+     + +
Sbjct: 762 EGTSEVQRMVI 772


>gi|226362078|ref|YP_002779856.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240563|dbj|BAH50911.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 568

 Score =  299 bits (766), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 143/519 (27%), Positives = 230/519 (44%), Gaps = 30/519 (5%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN   +D  L A++  + +   ++     L  LG          LA  A+ N P L  + 
Sbjct: 1   MNFAHTDPALRAVVDRWTAASERDKLNALLGRLGADAAGR-LDALAATADKNPPVLEQFD 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
             G+R D++ +HPA+  L R +  + GL      R          H ++    Y+  Q E
Sbjct: 60  RDGDRIDRISYHPAYQELCRAAYSEYGLSALSHRRGLHGWDAVPPHLVKYLASYVFVQAE 119

Query: 148 AGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     S+T  +A  + +   P V   W   + S E          + ++   + +TE 
Sbjct: 120 FGLACPVSMTDAAARTLRMFGNPDVFGPWIDALTSTE---------PEGAMTGAMFMTEP 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-------VEGRVGCFLV 258
           + GTDIA   +  ++  DG + L+G KWF S+P +D  I LA+           VG F+V
Sbjct: 171 QAGTDIARTETVAERDGDG-WRLTGKKWFASNPDADVVITLARFPGGENHTTRGVGMFMV 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P++L +G  N     RLK+K+G RS  + E+     +   +G+L+     + +M     L
Sbjct: 230 PKVLPNGERNSYTIDRLKDKLGTRSMPSGEVSLIGAYALQVGELDRGFRQMAEMVNTSRL 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A+ S + MR ++ +A+ + R+R V G  L DQP+M+  +  +ALD  AA AL    A 
Sbjct: 290 SNAMRSSALMRRAVRDAVDHTRQREVFGKKLFDQPLMRATLLPLALDAEAALALVAYSAQ 349

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               A +  + A    R++ P+ K++ CK A  V  E+ME  GG+GYIEE + AR  R++
Sbjct: 350 CLQAADADDDSARGLIRVLTPLAKHYICKRARVVTGESMEVRGGNGYIEEWAHARLVRDA 409

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
              SI  GS N + LDVL  + K      QL  T+   L   G      +   +    + 
Sbjct: 410 HLGSIWEGSSNVIALDVLRCMRK-FGAHRQLADTMRAILAGLGPDCAAGVEMLVRRWDDL 468

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
                 L       + A    R   N++A   +     D
Sbjct: 469 VEEGDVLVAGDDDTAQAGC-ARYA-NELARAAMSTLLYD 505


>gi|237744392|ref|ZP_04574873.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|256027164|ref|ZP_05440998.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|260494055|ref|ZP_05814186.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289765142|ref|ZP_06524520.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|229431621|gb|EEO41833.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|260198201|gb|EEW95717.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289716697|gb|EFD80709.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 381

 Score =  299 bits (766), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 146/381 (38%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDEEERFPM--ETVEKMAKIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGTEKQKQKYLPKLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   ++ ++++A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R ++T EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 NTPGFSIGKKEMKLGIRGSSTCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IAAQALGIAAGALGEAIGYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANVIK 381


>gi|33600084|ref|NP_887644.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567682|emb|CAE31596.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 552

 Score =  299 bits (766), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 141/550 (25%), Positives = 232/550 (42%), Gaps = 45/550 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P  +G N Y +D+ L AL++     +  + +   L  LGE       ++LA  A+ +TP+
Sbjct: 15  PDSLGQNLYLADADLPALLSLYLAPDLLAHLTPHLHRLGELAGGR-LEQLAAQADKHTPE 73

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      G    +V  HPA+  L R +  + GL  +                 +    YL
Sbjct: 74  LVVRTRQGHDCSEVVKHPAYVELERWAFSEFGLAAASHAPGVLGWHEPLPAAAKYTLFYL 133

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +Q E G     ++T +    L     P + + +  ++ S ++D         T     +
Sbjct: 134 FSQSEYGLTCPVNMTDSFTRTLKKYGEPALVQRYLARLTSLDFD---------TYYQGAM 184

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVG 254
            +TE+  G+DIA   +  ++  +  + LSG KWF S+  +D  ++LA+ +        V 
Sbjct: 185 FMTEQGAGSDIAQTAATARRDGEH-WLLSGDKWFCSNASADLAMVLARPDDAPAGMAGVS 243

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+PR+  DG+PN     RLK+K+G RS A+ E+       +L+G++      + +M  
Sbjct: 244 LFLMPRVKADGTPNAYRIIRLKDKLGTRSMASGEIRLEGAQAYLIGEVGKGFQQMAEMVN 303

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L + + S + MR +L+EA + A  R   G  L D P+++R +  + L    A   ++
Sbjct: 304 SSRLSNGVRSGALMRRALSEASYVAEHRRAFGKRLADLPLIRRQLDKMRLMTEQARTFAY 363

Query: 375 RLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A +   A    E A    RIM P+ K+  C+ A  V  +AME  GG GYIEE   AR 
Sbjct: 364 HTAQALRGADEGDETARRVVRIMTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWPEARL 423

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILR-- 488
            R++   SI  G+ N + LDV   + +   L      L + L Q  G  G  +   L   
Sbjct: 424 LRDAHLGSIWEGTSNIVALDVYRAINREDALTAYEGALRNLLGQASGPHGAALAQRLDLV 483

Query: 489 ---DSISLCKEDKGLARFLTEKIALASSAAAL---------YRAGMNDIADVFLENRFLD 536
               +     + +  AR +   +    SA                    ADV L +R   
Sbjct: 484 CAYAARQAGAQCEEAAREVASALYHVGSAIQFAWEASQGGQLAHRHAYAADV-LAHRLDP 542

Query: 537 NCHSTHCMLH 546
                  +LH
Sbjct: 543 QLRRA-GLLH 551


>gi|256822283|ref|YP_003146246.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795822|gb|ACV26478.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 382

 Score =  299 bits (766), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 140/401 (34%), Gaps = 43/401 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
            Q++AR             P  E WDK +  PA    L+     G +  +    +     
Sbjct: 10  IQDMAR-----GYVQERIAPFAEEWDKNKTFPA--EALQGLAELGFYGMLVPEQWGGCEI 62

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNK 188
                                ++S + +   M  L   T    + +   + S E      
Sbjct: 63  GYVAAALVLEEIAAGDGACSTIISVTNSVGCMPILNFGTDEQKEKFLKPLASGE------ 116

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPMS-DAF 243
                        LTE   G+D + + ++         D  Y ++G K F++S  + D  
Sbjct: 117 -------KLGAFCLTEPHAGSDASDLKTKAVLEKGPDGDH-YIINGSKQFITSGKNGDTA 168

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G     +++K+G  ++ T  + F +         N
Sbjct: 169 IVFAVTDPSAGKKGISAFIVPTDTPGYIVSNIEDKMGQNASDTASIVFEDCRVPA---EN 225

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +     E  KI +       +  A  SV   R +   A+ Y++ R   G  +     ++ 
Sbjct: 226 LLGKEGEGYKIALSGLEGGRIGIAAQSVGMARAAYEYALQYSKERTSFGKPINKHQAVQF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  +    A   D      +EA  A       K +  ++A  V +EA++
Sbjct: 286 KLADMATQVEAARQMVLHAAQLRDNNLPCLKEACMA-------KLFASEIAEKVCSEAIQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG GY+ +  + R YR+     I  G+     + +   +
Sbjct: 339 ILGGYGYLRDYPVERIYRDVRIAQIYEGTSEVQRMVIGRAI 379


>gi|146296802|ref|YP_001180573.1| acyl-CoA dehydrogenase domain-containing protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410378|gb|ABP67382.1| butyryl-CoA dehydrogenase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 381

 Score =  299 bits (766), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 147/402 (36%), Gaps = 28/402 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +Y LS   + + R+A   + ++        ++DK    P    +L    +  L      +
Sbjct: 2   DYFLSEEQKVIKRLAKRISDEV--ISKVAGKYDKEGIFP--RDILDLLAYTELTGVYIPK 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +                            + S   A  + L  T    + +  KI   E
Sbjct: 58  EYGGFGGGVMEMCLVVEELSRNCAGIAVSYAASALGAYPIMLYGTQEQKEKYLTKIARGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D++ I +  +K  D         W  +   +D 
Sbjct: 118 -------------AIAAFALTEADAGSDVSNIKTVAEKNGDFYILNGNKHWITNGGEADI 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +++ A  +   G   +   + +    G  + + ++K+G R+++T EL F N        L
Sbjct: 165 YVVFAVTDKSKGPRGISAFIVEKGYEGFYFGKKEDKMGIRASSTTELVFENCKVPKENLL 224

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               TG +  MK         A M+V   + +   A+ YA+ R   G  L     ++  +
Sbjct: 225 GREGTGFIIAMKTFDRTRPGVAAMAVGIAQGAYEHALKYAKERVQFGQPLSSFQAIQHML 284

Query: 360 ADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           AD+ ++I AA AL +      D   K  ++E+          K +   +A  V  +A++ 
Sbjct: 285 ADMYINIEAARALLYSTCKMIDSGAKDYTKES-------SACKVFASDVAMKVTIDAVQI 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG+GY+++  + +  R++    I  G+       + + + K
Sbjct: 338 MGGNGYVKDYPVEKMMRDAKVTQIFEGANQIQRNIIASEIVK 379


>gi|323691729|ref|ZP_08105989.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323504207|gb|EGB20009.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 638

 Score =  299 bits (766), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 76/434 (17%), Positives = 157/434 (36%), Gaps = 45/434 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    PA    + +    GL    + + +            A          A
Sbjct: 26  PQAFLLDQNNEFPA--EAVEKLGKMGLMGIPYPKEYGGAGMDILSYAIAVEELSRVDGGA 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S  V+     +    T    + +               P+ +       GLTE   
Sbjct: 84  GVILSAHVSLGSWPIFAFGTEEQKQKYL-------------VPLARGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +      D      G  +  ++P +D +++ A     +G   +   + +   
Sbjct: 131 GSDAGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGW 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G  +    +K+G RS++T EL F++         N+     E  KI +  LD   + ++
Sbjct: 191 EGFEFGDHYDKMGIRSSSTAELIFNDVKVP---KENLLGKEGEGFKIAMATLDGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ Y++ R   G  +  Q ++   +AD+A  +  A  L +  A   +
Sbjct: 248 SQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADMATKLRCARFLIYSAAELKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      E+A A+        +   +A  V  +A++  GGSGY++   + R YR++   +
Sbjct: 308 QHVPYGMESAMAKQ-------YASDIALEVTNDALQIFGGSGYLKGMEVERAYRDAKITT 360

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED---K 498
           I  G+     + + + +             + ++ G  G K +        L K+    +
Sbjct: 361 IYEGTNEIQRVVIASHI----------IGKMPKESGGGGAKHMKKPAPITGLRKKQILKE 410

Query: 499 GLARFLTEKIALAS 512
           G A+   + +  A 
Sbjct: 411 GKAQEKVDTLVAAL 424


>gi|148657874|ref|YP_001278079.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569984|gb|ABQ92129.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 388

 Score =  299 bits (766), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 130/378 (34%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P    +LR++   GL    +  ++                        
Sbjct: 26  PIAREIDEEERVP--FEMLRKAADLGLLGVPFPEAYGGSDAGITGYCVLLEEINRKCAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++   V   SM + L  TP   + +               P+ +        LTE   
Sbjct: 84  GTILGAHVQLCSMSIHLAGTPDQKERYL-------------RPLIEGRKWGAWALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A I +   +  D         W  +   +D  ++ A  +   G   +   + +   
Sbjct: 131 GSDAAHIRTTAVRDGDFWVLNGSKMWITNGSFADVIVVFASTDPGAGPRGITAFIVEKDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +++ K+G R++ T  + F +        L            L  LD     +  
Sbjct: 191 PGFKVGKVEPKMGLRASHTASIFFEDCRVPASNVLGEVGRG--YALALQTLDIGRCGLGA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  A+     ++ YA  R   G  + D   ++  +AD+A+ I     + +  A   D 
Sbjct: 249 ACLGAAKEAYELSLKYAVERQQFGRPIADFQAIQFKLADMAVKIYTMEQIVYDCAKKVDR 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++       AR+ + I K +C      ++ EA++  GG G+  E  + R YR++    I
Sbjct: 309 GET-------ARLESSIVKLYCTDSLAWILDEAIQIHGGMGFSRELPLERMYRDARVFRI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       + + L K
Sbjct: 362 YEGTNEIQRYVIASELLK 379


>gi|206970311|ref|ZP_03231264.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228955590|ref|ZP_04117591.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228961606|ref|ZP_04123215.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051013|ref|ZP_04194561.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229072809|ref|ZP_04206008.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|229082556|ref|ZP_04215019.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|229112756|ref|ZP_04242288.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130591|ref|ZP_04259547.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229147882|ref|ZP_04276223.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|229153505|ref|ZP_04281683.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|206734888|gb|EDZ52057.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228630109|gb|EEK86760.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228635532|gb|EEK92021.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228652930|gb|EEL08812.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228670590|gb|EEL25902.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228700988|gb|EEL53511.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228710300|gb|EEL62275.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228722322|gb|EEL73719.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228798088|gb|EEM45092.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804093|gb|EEM50711.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 381

 Score =  299 bits (766), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|258514955|ref|YP_003191177.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778660|gb|ACV62554.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 386

 Score =  299 bits (766), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 139/383 (36%), Gaps = 32/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D  E       +  +    GL    +   +            A           
Sbjct: 26  PGAAARDHHETFEK-EIMWDKMAEIGLPGIPFPEEYGGTGMDNVSYALAVEELSRTCAST 84

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  +S  V+  A  +    T    + +               P+         GLTE   
Sbjct: 85  GVTLSAHVSLCAWPIYGFGTEEQKQKFL-------------TPLANGEKIGAFGLTEPAA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A  +      D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 132 GSDAGATKTTAVLEGDN-YVLNGTKIFITNGYYADIYVITAMTDKSKGLKGITAFIVEKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  + + + K+G R++AT EL F N     +   N+     E  K+ +  LD   + +
Sbjct: 191 TPGFTFGKKEEKMGIRASATYELVFDNCK---IPKENMLGKEGEGFKVAMATLDGGRIGI 247

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A+     A++YA  R   G  +  Q  +   +AD+A+ I A+  L+ + A   
Sbjct: 248 ASQAVGIAQGAYDYALNYANTREQFGKPISAQQAIAFKLADMAMKIEASRLLTLKAAYMK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    R        + + + K +    A  V  EA++  GG+GY  E  + R  R++   
Sbjct: 308 DAGDKR------YGLYSAMAKCFAGDTAMEVTTEAVQICGGNGYTREYPVERMMRDAKIT 361

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     + +   L  G  
Sbjct: 362 QIYEGTNEIQRVVIAAHLGVGGR 384


>gi|53724187|ref|YP_103373.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67639362|ref|ZP_00438227.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|124384158|ref|YP_001028996.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126450449|ref|YP_001081083.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|254178355|ref|ZP_04885010.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254200330|ref|ZP_04906696.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254357923|ref|ZP_04974196.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52427610|gb|AAU48203.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|124292178|gb|ABN01447.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126243319|gb|ABO06412.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147749926|gb|EDK57000.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|148027050|gb|EDK85071.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160699394|gb|EDP89364.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238519897|gb|EEP83363.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
          Length = 597

 Score =  299 bits (765), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 136/530 (25%), Positives = 232/530 (43%), Gaps = 36/530 (6%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGE 63
              M +  + +         P   G+N ++SD    AL+              EL  LG 
Sbjct: 1   MNMMKETFEANAPAAGAANIPDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGL 60

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
              S     LA  A+ N P L      GE  + ++ HP +  L R +       ++  R 
Sbjct: 61  RA-SDELDRLASRADRNPPVLQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRD 119

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181
             P        ++ A  +L  Q E G     S+T +    L    +  + + + P++ SR
Sbjct: 120 GAPPP-----LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASR 174

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSS 237
           ++D   +  M          +TE+  G+D+  I ++  +         + L G KWF S+
Sbjct: 175 DFDVLYQGAMF---------MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSN 225

Query: 238 PMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +D  ++LA+ EG       +  FL+P+ L DGS N     RLK+K+G+RS A+ E+  
Sbjct: 226 ADADLAMVLARPEGAPDGVKGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIAL 285

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                +L+G++      + DM  +  L + + +   MR +  EA+H AR R   G  LID
Sbjct: 286 DGAEAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLID 345

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPA 410
            P+M+R +  + +    A +L  ++A    +A +  ++     RI+ P+ K+  C+ A  
Sbjct: 346 MPLMQRQLVKMLVPTEQARSLFMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARR 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V  +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV   +++   L   L +
Sbjct: 406 VAGDAMEVRGGTGYIEEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRA 464

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
            L   L ++       T LR ++    +         +   +  +A+ALY
Sbjct: 465 FLLGALDTARLPGASATRLRRALDRASDAIAHVARTGDDAFVRQAASALY 514


>gi|256845081|ref|ZP_05550539.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256718640|gb|EEU32195.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 381

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 146/381 (38%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDEEERFPI--ETVEKMAKIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGTEKQKQKYLPKLASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   ++ ++++A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R ++T EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 NTPGFSIGKKEMKLGIRGSSTCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IAAQALGIAAGALGEAIGYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANVIK 381


>gi|198434786|ref|XP_002132169.1| PREDICTED: similar to MGC107841 protein [Ciona intestinalis]
          Length = 623

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 126/575 (21%), Positives = 223/575 (38%), Gaps = 65/575 (11%)

Query: 3   LREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKE 57
           +  +  R    + HQ +   F    P +    N Y  D LL + +           +  +
Sbjct: 20  VHTLQTRCKNTKYHQAAVGSFTQEAPSVL---NPYQCDGLLKSYLQRNIPKEHFQHISMD 76

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+  GE +      E+ +    + P L  Y   G R ++VE    W+ +   S  +GL  
Sbjct: 77  LQNFGETI-KNEITEMGQKCEASPPTLKQYDAWGNRINQVETCNEWNQMKNISAREGLIA 135

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL----MTTPRVHKD 173
             + R F    R      + A+L+L +     +    ++T  + + L     ++   H  
Sbjct: 136 HGYTRQFGKYSR----IYQFAKLFLFSPCSGMYACPLAMTDGAALVLERVLNSSEEKHSI 191

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHK 232
                   +      +P   T    G  +TEK GG+D+A  T +   K  D  Y L G+K
Sbjct: 192 LL------KAFKCLTSPNPDTFWTSGQWMTEKAGGSDVANATDTFAYKQDDKTYKLFGYK 245

Query: 233 WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDG----SPNGLCYQRLKNK 278
           WF S+  +D  + LA+V             +  F +    ED       NG   +RLK+K
Sbjct: 246 WFTSATDADMALTLARVVDRDGNSLSGTKGLSLFYLETRDEDKKLPSGLNGFQVERLKDK 305

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G R   T EL    T   ++GD +     +  M  +  + +++ S + MR  L  +  Y
Sbjct: 306 LGTRQLPTGELLLDGTVAHMVGDRSNGIRLISGMLTVTRIHNSVWSAASMRRLLLLSKDY 365

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YA 393
           A +R   G +L D P+  + +A + ++  AA  ++F +           +E +       
Sbjct: 366 ATKRSAFGSLLNDHPLHMQTLARMEIESRAAFLVTFEVVRLL--GLIEVKEGSEIDNDML 423

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           R++ P+ K +  K A AV +E +E  GG+GY+E+  +    R++   SI  G+ N + LD
Sbjct: 424 RLLTPLAKLYTAKQAIAVASEGLESFGGAGYLEDTGLPSFLRDAQVLSIWEGTTNVLSLD 483

Query: 454 VLNLLEK-GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK----- 507
            L  + K    +    F ++   L S        L+ S++      G  R    +     
Sbjct: 484 TLRAIAKSKGQVLNSFFQSVNIRLSSVTDSGNKNLKSSVAKTSIAAGDLRAFINQTSSTG 543

Query: 508 ---IALAS-----------SAAALYRAGMNDIADV 528
              + LA+           +A  +        A  
Sbjct: 544 HDSMFLAARDFSYSLFRIYAAVLMLEHASWCDASA 578


>gi|229033975|ref|ZP_04188928.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228728350|gb|EEL79373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 376

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKD 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +    +    N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPV---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|226315082|ref|YP_002774978.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226098032|dbj|BAH46474.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 380

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 39  RQILKKMGEMGLMGIPIAEEWGGAGADFISYILAIHEISKVSATVGVILSVHTSVGTNPI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ S EY                  LTE   G+D ++I +   K  
Sbjct: 99  LYFGTEEQKRKYVTKLASGEY-------------LGAFALTEPHAGSDASSIRTTAVKKG 145

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y L+G+K F+++   +D +I  A  +   G   +   + D    G    + + K+G 
Sbjct: 146 DE-YILNGNKVFITNGGEADTYIAFAVTDSTKGPKGISAFIVDKDTPGFTVGKKEKKMGL 204

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T EL F N        L     G    M  L    +  A  ++     ++  A  Y
Sbjct: 205 HGSYTTELVFDNARVPAANLLGQEGEGFCIAMANLDSGRIGIAAQALGICEAAVQYATEY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +  Q  +   +AD+A     A  L +R A    +  +   EA+ A+    
Sbjct: 265 AQERKQFGQSIAKQQAIAFKLADMATKAEVARLLVYRAAWLRSQGIACGMEASMAKR--- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +    A  +  EA++  GG GY  E  + R +R++    I  G+     + +   L
Sbjct: 322 ----FATDSAMELATEAVQIFGGYGYTREYPVERLFRDAKVTQIYEGTNEIQRIVIAKHL 377


>gi|239815089|ref|YP_002943999.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239801666|gb|ACS18733.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 569

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 142/535 (26%), Positives = 234/535 (43%), Gaps = 29/535 (5%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTA 70
           H   D   A++  P   G + Y+ D+ L  L+A     +  + +    E LG        
Sbjct: 4   HAAIDGGTAVHPVPDRHGRSLYAEDAELHRLLAVYLPADLLAHMRPHFERLGTLAGGR-L 62

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVR 129
            ELA  A+ N P L      G    +V  HPA+  + R ++ + GL              
Sbjct: 63  DELAHTADRNPPTLTLRTRTGIDDPQVHKHPAYVEMERLALSEFGLAAMSHREDTLGWKG 122

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTN 187
           +    ++    YL  Q E G     S+T   A  +    +P + + + P+  S ++D   
Sbjct: 123 RMPPLVKYVLTYLFVQAEFGLCCPVSMTDSLARTLKKFGSPELVERFLPRFQSLDFDMLA 182

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           +  M          +TE+  G+DIAA  ++  +   G + L+G KWF S+P +D  ++LA
Sbjct: 183 QGAMF---------MTEQAAGSDIAATETRAWQDEQGQWRLAGDKWFCSNPDADFAMVLA 233

Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +V+G       V  FL+PR L+DGS N     RLK+K+G RS A+ E+       +L+G+
Sbjct: 234 RVDGGPPGMKGVSLFLLPRRLDDGSANRYRILRLKDKLGTRSMASGEIRLEGALAYLVGE 293

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + DM     L + + +   MR ++AEA + A  R   G  L D P+M+R +  
Sbjct: 294 QGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAHERRAFGRRLEDMPLMQRQLDK 353

Query: 362 IALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + L    A ++ F+ A +   + S  S      RI+ P+ K+  C+ A  V  +AME  G
Sbjct: 354 LRLPAEQARSMLFQTAQALARSDSGESTAYPLLRILTPLIKFRACRDARKVTGDAMEVRG 413

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGS 478
           G GYIEE S  R  R++   SI  G+ N + LDV+  +++  +L   +  F  L  D   
Sbjct: 414 GCGYIEEWSDPRLLRDAHLGSIWEGTSNIVALDVIRAVKREGSLPVLQAHFEGLLDDAPL 473

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           +      +              A    +++A    AA+     ++ IA  +   R
Sbjct: 474 APAFAAALRDALGRAAALALLAAEDGGDRLA--RQAASALYHVVSAIAMAWEGAR 526


>gi|288931943|ref|YP_003436003.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894191|gb|ADC65728.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 383

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 151/396 (38%), Gaps = 35/396 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A+E A+     TP+       G  +D+ E  P    L +++   G     +   +   
Sbjct: 14  RAAREFAQA--EFTPE------RGREYDEKEEFP--FDLWKKACELGFIGVHFPEEYGGA 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +  A  +  A    G  +  S  S+ ++    +    ++  PK+ S       
Sbjct: 64  GLGYLENVLIAEEFCRADSTIGSAIILSDFSSEVIMKFGSEEQKEEVLPKVASG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                          TE   G+D+ AI ++ +K  D         +  ++P++D F++LA
Sbjct: 118 -------KAITAGCYTEPEAGSDLTAIRTKAEKDGDEWVINGTKTFITNAPIADYFVVLA 170

Query: 248 QVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDL 302
             +             L   +  GL   ++  K G RS+ T E+ F +       ++G L
Sbjct: 171 VTDPNAQPRYRGFTTFLVRKNAEGLKINKITGKFGIRSSPTAEVSFKDVRVSEEDVIGQL 230

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     V +      ++ A  ++   + +L + I Y ++R   G  +     ++  IAD+
Sbjct: 231 NRGFYQVLEFFDGSRIEIAAQAIGIAQGALDKTISYVKQRKQFGQPIGAFQALQHRIADM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + A   L ++ A  +D  +           +  + KY+  K+A  +  EA++  GG 
Sbjct: 291 AAQLEACRLLVYKAAWKYDRGEIDPA-------LTSMAKYYAGKLAVRICDEAIQMHGGY 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E  + R YR++    I  G+    +  +   L
Sbjct: 344 GYIAEYDVERFYRDAKITEIYEGTKEIQLNTIAKGL 379


>gi|42784518|ref|NP_981765.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|222098814|ref|YP_002532872.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus Q1]
 gi|42740450|gb|AAS44373.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|221242873|gb|ACM15583.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase
           [Bacillus cereus Q1]
 gi|324329292|gb|ADY24552.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 376

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|253682754|ref|ZP_04863549.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253560953|gb|EES90407.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 137/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLE 147
           P     D+ E  P    ++      GL        +        ++ +    +       
Sbjct: 26  PIAAELDEEERFPE--EIIPIMGETGLFGIPISDQYGGAGAGNLSYVLAVEEISKACAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T      + P + +                    GLTE   
Sbjct: 84  GVTVSAHTSLCCWPIETFGTEEQKSKYLPDLATGV-------------KLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G+K F+++   +D +++ A  +  +G   +   + +  
Sbjct: 131 GTDAAGQLTVAVDKGD-YYLLNGNKIFITNGEVADVYVVFAMTDKALGNRGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +   + K+G   ++T EL F +     L   N+     +  KI ++ LD   + V
Sbjct: 190 MEGFSFGSHEKKMGIHGSSTCELIFKDVK---LPKENLLGEINKGFKIAMMTLDGGRIGV 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE      + Y + R      L      +  +A++   I AA  L +  A + 
Sbjct: 247 AAQALGIAEGALDATVEYVKTREQFNRPLSAFQNTRFTLAEMKTRIEAARYLVYSAAQAK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++ +E+AA A       K +  + A  V  +A++  GG GY  +  + R  R++   
Sbjct: 307 DNGEAYAEKAAMA-------KLFASETARDVTCKAVQLFGGYGYTRDYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 360 EIYEGTSEVQKMVISGDLLK 379


>gi|78043643|ref|YP_360430.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995758|gb|ABB14657.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 380

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 139/381 (36%), Gaps = 35/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+ D+    P     L +    GL        +          I             
Sbjct: 26  PIAEKTDREHRFP--KETLDKLAELGLMGIPISEEYGGAGADYFSYILFIEEIAKVCAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +++  +    M + +  T    + +               PM +  +     LTE   
Sbjct: 84  AVILAVHIGLGCMSIYMFGTEEQKQKYL-------------VPMAQGRMLGAYALTEPNS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D A++        D    L+G K F+++   +D FI  A+ +    G   +  L+ + 
Sbjct: 131 GSDAASLRLSAVDKGDHF-VLNGSKIFITNGSYADVFITFARTDPATKGAEGITCLIVEK 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMS 324
           +  GL   +   K+G   + T EL F N         NV     E  K+ + L D   ++
Sbjct: 190 NTPGLTISKPVEKMGLNGSVTCELYFENAIVP---KENVLGKIGEGFKVAMQLLDGGRIA 246

Query: 325 VSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +    + +AE        Y ++R   G  +     ++  +AD+A +I AA  L +R A  
Sbjct: 247 IGAQGLGIAEGAFEYTLNYIKQREQFGRPIAANQGIQWMVADMATEIEAAKLLVYRAAWL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +     S+EAA A+        +    A  V  + ++ +GG GY +E  + R+ R++  
Sbjct: 307 KNNGLPHSKEAAMAKK-------YATDTAMRVTTDCVQLLGGYGYTKEYPVERYMRDAKI 359

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 360 TQIYEGTNQIQRIVIARHLLK 380


>gi|290968887|ref|ZP_06560424.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781183|gb|EFD93774.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 379

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 79/364 (21%), Positives = 146/364 (40%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
            L+   +  GL  + ++  +          I A              +S +V+  A+ + 
Sbjct: 40  ELVAEMLGLGLTGAYFEEKYGGAECDVLSYILAVEELAKYDAGMSITLSATVSLCANPIW 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +   +   E                  GLTE   GTD +   +   K  D
Sbjct: 100 QFGTEAQKEKFLTPLVEGE-------------KLGAFGLTEPNAGTDASGQQTVAVKK-D 145

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D +I+ A  +   G   +   + +    G  + +L++K+G  
Sbjct: 146 DYYILNGSKVFITNGGSADIYIVFAMTDKSKGTKGISAFIVEKGTEGFTFGKLEDKMGIH 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           ++ T+EL F +         N+     E  KI ++ LD   + V+   + +AE     A+
Sbjct: 206 TSKTMELVFQDAKVPA---ENLLGKEGEGFKIAMMTLDGGRIGVAAQALGIAEAALNDAV 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+++R   G  L     +   +AD+ + + AA  L ++ A    E +  + +AA     
Sbjct: 263 EYSKQRVQFGKPLCKFQNIGFKLADMKMKVEAARNLVYKAAFKKQEGQPFTVDAA----- 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K +   +A  V  EA++  GG GY EE   ARH R++    I  G+   M++    
Sbjct: 318 --IAKRYASDVAMEVSVEAVQIFGGYGYSEEYPAARHLRDAKITQIYEGTNEVMLMVTSG 375

Query: 457 LLEK 460
            L +
Sbjct: 376 ALLR 379


>gi|47569767|ref|ZP_00240439.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|47553563|gb|EAL11942.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
          Length = 376

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEVLQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + A+  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEASRLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|310779890|ref|YP_003968222.1| butyryl-CoA dehydrogenase [Ilyobacter polytropus DSM 2926]
 gi|309749213|gb|ADO83874.1| butyryl-CoA dehydrogenase [Ilyobacter polytropus DSM 2926]
          Length = 381

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 139/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A      A    
Sbjct: 26  PIAAEIDEEERFPI--ETVKKMNEIGLMGIPVPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +      L   T    K + PK+ + E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGMAPILEFGTDAQKKKYLPKMTTGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + L+G K F+++   +  +I+ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAHFDEKTNEWVLNGSKIFITNAGYAHVYIIFAMTDKSKGLKGITAFILEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G + +AT EL   +         N+     +  KI ++ LD   + 
Sbjct: 191 DTPGFSVGKKEKKLGIKGSATCELIMEDCRVP---KENLLGAIGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   +     +L E+I+Y + R   G  +      +  +AD+     AA  L +  A  
Sbjct: 248 IASQALGISQGALDESINYVKERKQFGRSIAAFQNTQFQLADMHTKTEAARMLVYSAACK 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  S++AA A+++A        + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 KSSKKPYSQDAAMAKLLAA-------ETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 361 TEIYEGTSEVQKMVISAGLLK 381


>gi|1703067|sp|Q06319|ACDS_MEGEL RecName: Full=Acyl-CoA dehydrogenase, short-chain specific;
           AltName: Full=Butyryl-CoA dehydrogenase; Short=BCAD;
           AltName: Full=SCAD
 gi|1065243|pdb|1BUC|A Chain A, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase
           From Megasphaera Elsdenii
 gi|1065244|pdb|1BUC|B Chain B, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase
           From Megasphaera Elsdenii
 gi|149886|gb|AAA03594.1| acyl-CoA dehydrogenase [Megasphaera elsdenii]
          Length = 383

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 144/365 (39%), Gaps = 28/365 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYLMAQLE--AGHLMSPSVTSA 159
             L+   +  G+  + ++  +          +    A   L       A  L +     A
Sbjct: 39  KELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCA 98

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           + +    T    + +               P+ + +     GLTE   GTD +   +   
Sbjct: 99  NPIWQFGTEAQKEKFL-------------VPLVEGTKLGAFGLTEPNAGTDASGQQTIAT 145

Query: 220 KISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           K  DG Y L+G K F+++  + D +I+ A  +   G   +   + +    G  Y + ++K
Sbjct: 146 KNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDK 205

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G  ++ T+EL F +        L     G    M  L    +  A  ++     +LA+A
Sbjct: 206 MGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y+++R   G  L     +   +AD+ + I AA  L ++ A    E K  + +AA A+ 
Sbjct: 266 VEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKR 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A         +A  V  EA++  GG GY EE  +ARH R++    I  G+    ++   
Sbjct: 326 VA-------SDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTG 378

Query: 456 NLLEK 460
             L +
Sbjct: 379 GALLR 383


>gi|34763420|ref|ZP_00144369.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886914|gb|EAA24037.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 386

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 147/381 (38%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 31  PIAAEVDEEERFPI--ETVEKMAKIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACATT 88

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T ++ + + PK+ S E+                 GLTE   
Sbjct: 89  GVIVSAHTSLGTWPILKFGTEKLKQKYLPKLASGEW-------------IGAFGLTEPNA 135

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   ++ ++++A  +   G   +   + + 
Sbjct: 136 GTDAAGQQTMAVQDPETGEWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEA 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R ++T EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 196 NTPGFSIGKKEMKLGIRGSSTCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 252

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 253 IAAQALGIAAGALGEAIGYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 313 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 365

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 366 TEIYEGTSEVQRMVIAANVIK 386


>gi|295400653|ref|ZP_06810630.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977234|gb|EFG52835.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 379

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 140/364 (38%), Gaps = 33/364 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L +    GL        +        ++ I    +  ++      L   +    + +
Sbjct: 38  RPILNKMAELGLMGITVPEEYGGAGMDFISYIIAIHEISKVSATVGVILSVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + PK+ S EY                  LTE   G+D  ++ ++  +  
Sbjct: 98  LYFGTEEQKKKYVPKLASGEY-------------LGAFCLTEPGAGSDAKSLKTKAVRQG 144

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           D  Y L+G K F+++   +D +I+ A+      G   +   + +    G    + + K+G
Sbjct: 145 D-YYILNGSKIFITNGGEADTYIVFARTAPNEKGSRGISAFIVEKGTPGFIIGKDEKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI--- 336
              + TV++ F +         N+     +  KI +  LDS  + ++   + +AEA    
Sbjct: 204 LHGSRTVQIMFEDAKVPA---ENLLGEEGQGFKIAMANLDSGRIGIAAQSLGIAEAALEH 260

Query: 337 --HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              YA+ R   G  + +Q  +   +AD+A  + AA  L +  A    +     +EAA A 
Sbjct: 261 ATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCGKEAAMA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  + A     EA++  GG+GY ++  + R +R++    I  G+     L +
Sbjct: 320 ------KLFASRTAMENAIEAVQIFGGNGYTKDYPVERLFRDAKICEIYEGTSEIQRLVI 373

Query: 455 LNLL 458
              L
Sbjct: 374 SKYL 377


>gi|228930351|ref|ZP_04093355.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228949063|ref|ZP_04111335.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810636|gb|EEM56985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228829337|gb|EEM74970.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|228924078|ref|ZP_04087354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835568|gb|EEM80933.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|228936627|ref|ZP_04099421.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823062|gb|EEM68900.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|229158903|ref|ZP_04286960.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228624514|gb|EEK81284.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEVLQKMGELGLLGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|254209407|ref|ZP_04915753.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|147750180|gb|EDK57251.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
          Length = 595

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 135/510 (26%), Positives = 228/510 (44%), Gaps = 36/510 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 19  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 78  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 132

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 133 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 183

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 184 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 243

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 244 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 303

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 304 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 363

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 364 LFMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 423

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 424 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 482

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALY 518
            ++    +         +   +  +A+ALY
Sbjct: 483 RALDRASDAIAHVARTGDDAFVRQAASALY 512


>gi|288556197|ref|YP_003428132.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288547357|gb|ADC51240.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 556

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 113/471 (23%), Positives = 213/471 (45%), Gaps = 33/471 (7%)

Query: 34  MNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y +D +L  ++             K+LE  GE   +   +          P+L  Y 
Sbjct: 1   MNFYQNDPVLKKILKTHLDSRMFNWADKQLESFGEMCGTVIDERAKHTDREGQPKLVKYN 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE    +  +  +   +R +   G+   +  +    +  K  +    A+ YL++Q E 
Sbjct: 61  QFGEDISHIWVNEGYKQTVRETYQTGIVGYV-HKKIPELNTKGNYMYSYAQGYLLSQSEP 119

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     +++ A+ + L       V + + P + S       +             LTE++
Sbjct: 120 GFYCPVTLSMATALLLEKYANEDVKERFLPHVLSTGETELYEGATF---------LTERQ 170

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVP 259
           GG+D+ A      K  D  Y +SG K+F  ++ +    ++LA+ +G       +  F VP
Sbjct: 171 GGSDVGANEVAAVKNGDH-YLISGEKYFASNAGVCGVAMVLARGDGSSSGTKGLSLFAVP 229

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             LE G  NG+  +RLK+K+G R+  + E+EF+N   +L+GD +     + +   L  + 
Sbjct: 230 WRLEGGELNGISIRRLKDKLGVRAVPSAEVEFTNAKAYLVGDESKGIYYMMEALNLSRIC 289

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+ S+  MR +  EA+ YA +R      LID P+++ ++  + +     T   F L   
Sbjct: 290 NAVASIGIMRRAYQEALRYAFKREAFKKQLIDYPMVQESLLALCVKHEIETVAIFDLIKE 349

Query: 380 FD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +D       + +   E+AAY R++  I K    + A     EA+E +GG+GYIE+    +
Sbjct: 350 YDLLMNDDQKDQKDHEQAAYVRLLIAILKKETAEQAIHFSHEAIELLGGNGYIEDFVTPK 409

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             R++   ++  G+ N + L++L L++K T++ +Q    ++  + S  K+ 
Sbjct: 410 LLRDAQVLTVWEGTANILGLELLRLMKK-THVHKQFSKRIKAFVESDLKQF 459


>gi|228942489|ref|ZP_04105025.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975421|ref|ZP_04135976.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982056|ref|ZP_04142348.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228777594|gb|EEM25869.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228784215|gb|EEM32239.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817172|gb|EEM63261.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGDLGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY +E  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKEYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|237738120|ref|ZP_04568601.1| acyl-CoA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
 gi|229420000|gb|EEO35047.1| acyl-CoA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
          Length = 381

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 139/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 26  PLAAEVDEEERFPI--ETVKKMAEIGLMGIPIPKEYGGAGGDNVMYAMAVEELSRVCATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGTEEQKQKYVPKLASGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + ++G K F+++   +D +++ A  +  +G   +   + + 
Sbjct: 131 GTDAAGQQTTAVLDEATNEWVINGSKIFITNAGYADVYVIFAMTDKSLGLKGISAFIIEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G + ++T EL F +     +   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFTVGKKEKKLGIKGSSTCELIFEDAR---IPKENLLGQIGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     E ++Y + R      +      +  +AD+ + + AA  L ++ A  
Sbjct: 248 IASQALGIAQGALDETVNYVKERKQFKRAIAQFQNTQFQLADLEVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYTVDAARA-------KLFAAETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 361 TEIYEGTSEVQRMVISGNLLK 381


>gi|332521398|ref|ZP_08397854.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332043126|gb|EGI79324.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 380

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER DK  F      L+++    G    + D  +        ++ +    L  +    +  
Sbjct: 30  ERDDKQHFPD---ELVKKMGDLGFMGIMVDPKYGGSGMDATSYVLIMEELSKIDASASVI 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   +      +    +    + +  K+ + E+                  L+E   G+D
Sbjct: 87  VSVNNSLVCYGLEAYGSEEQKQKYLTKLATGEF-------------VGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +  +   D         W  S   +D ++++AQ +   G   +   + +    G 
Sbjct: 134 ATSQRTTAEDKGDHYIINGTKNWITSGGRADVYLVIAQTDKEKGHKGINAFIVEKGTPGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G R + T  L+F++        +     G    MK L    +  A  ++  
Sbjct: 194 DVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A+ Y++ R   G  + +   +   +AD+  DI+AA  L  + A   D+  +  
Sbjct: 254 ASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYTDISAARHLVMKAAWDKDQGNNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A A       K +  K+A     EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 314 MSSAMA-------KLYASKVAMEHTVEAVQIHGGNGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEKG 461
               + +   + KG
Sbjct: 367 EIQKIVISRGVIKG 380


>gi|253582140|ref|ZP_04859364.1| acyl-CoA dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251836489|gb|EES65026.1| acyl-CoA dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 381

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 133/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A           
Sbjct: 26  PLAAEVDEEERFPV--ETVKKMAEIGLMGIPIPKQYGGAGGDNVMYAMAVEELSRVCGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILHFGTEEQKQKYIPKLASGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + ++G K F+++   +D +++    +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAVLDEATNEWVINGSKIFITNAGYADVYVIFGMTDRSKGLKGISAFILEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G    + + K+G + ++T EL F N        L  V  G    M  L    +  A 
Sbjct: 191 GTPGFSIGKKEKKLGIKGSSTCELIFENVRIPKSNLLGEVGKGFKIAMMTLDGGRIGIAS 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E + Y + R   G  +      +  +AD+ + I A+  L ++ A     
Sbjct: 251 QALGIAQGALDETVGYVKERKQFGRAIAKFQNTQFQLADLEVKIEASRLLVYKAAWRESN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 311 NLPYTVDAARA-------KLFAAETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEI 363

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 364 YEGTSEVQRMVIAGNLLK 381


>gi|229124846|ref|ZP_04254024.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228658637|gb|EEL14299.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
          Length = 381

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   V   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGVSAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|168186034|ref|ZP_02620669.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
 gi|169295969|gb|EDS78102.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
          Length = 379

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+    + + +  +       I A           
Sbjct: 26  PMAAEIDETEAFPM--ENVKKMAKYGMFGIPFAKEYGGIGGDYLSYILAVEELAKKCGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  V+  AS++    T    K + P++ S                    GLTE   
Sbjct: 84  SIILSAHVSLCASVIDTFGTEEQKKKYLPELCSG-------------KKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++  ++D FI  A  +   G   +   + +  
Sbjct: 131 GTDASGQQTVAVKQGD-KYILNGQKIFITNGGVADVFIAFAMTDKSKGTKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R+++T EL F +        +     G    MK L    +  +  
Sbjct: 190 FKGFSIGKVEDKLGIRASSTTELIFEDCEVPAENLIGKEGRGFGIAMKTLDGGRIGVSAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EA+ Y + R   G  L     M    A+    I AA  L ++ A +    
Sbjct: 250 ALGIAEGALEEAVEYMKERKQFGKQLYKFQGMGWMAAECKAKIEAARYLVYKAAYNKMTG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  + EAA A       K +    A  V  +A++  GG GY ++  + R +R++    I 
Sbjct: 310 KPYTVEAATA-------KLFAADTAMEVATKAVQMFGGYGYTKDYPVERMFRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L +
Sbjct: 363 EGTSQVQKMVISGALFR 379


>gi|255525273|ref|ZP_05392214.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296187780|ref|ZP_06856174.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255511038|gb|EET87337.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296047737|gb|EFG87177.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 380

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 133/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          ++            
Sbjct: 26  PIAKEIDETMRFP--KENVAKMAEMGLLGIPYPEEYGGAGMDTLSYMQCVEELAKCCATT 83

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +  +  +    T    + +   + S E                   LTE   
Sbjct: 84  STIISAHTSLGTGPIYAYGTDAQKEKYLKPLASGE-------------KLGAFALTEPCA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   S      D  Y L+G K F+++   +D +I+LA  +   G   +   + +  
Sbjct: 131 GTDSAMQKSTAVLEGDH-YVLNGSKIFITNAGFADVYIVLAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G      + K+G R+++T EL F N         N+     +  KI +  LD   + +
Sbjct: 190 FPGFSVGNHELKMGIRASSTCELFFDNCIVP---KENLLGEEGKGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E I Y   R   G  +      +  +A +  +  AA  L ++ A + 
Sbjct: 247 AAQALGIAEGAIEETIKYVNERVQFGRTISKFQNTQFELAQMRANTEAAKLLVYQAACAK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  +  AA A+++A        + A  V    ++  GG GY  +  I R  R++   
Sbjct: 307 DNNEPYTHLAAMAKLVA-------SRNASDVTRRCLQLFGGYGYSSDYPIERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+    ++ +   +
Sbjct: 360 EIYEGTSEVQMMVISGWM 377


>gi|225175702|ref|ZP_03729695.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168626|gb|EEG77427.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 379

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 136/376 (36%), Gaps = 35/376 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAG 149
           GE  +K EF    H +  +    GL    +   +        ++ I    +         
Sbjct: 29  GELDEKGEFP---HEITSKMAEMGLFGLPFSEEYGGSGAGYLSYAIAVEEISRACASTGI 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              +        + L  T    K W P   S                    GLTE   G+
Sbjct: 86  TYAAHCSIGTGPIYLFGTEEQKKKWVPLCASG-------------KAFAAFGLTEPNAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D     +      D  + L+G K F+++  +    ++ A  +   G   +   +      
Sbjct: 133 DAGGTQTTAVLEGDE-WVLNGSKCFITNVGVGKVAVITAVTDRSKGTRGISSFIVPTDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    +  +K+G +++ T E+   N     +   N+     E  K  L+ LD   +S+  
Sbjct: 192 GFSVGQPYDKMGLKASDTREIILENVR---IPKENLLGNQDEGFKQFLVALDGGRISIGA 248

Query: 328 MRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V +A+A       YA+ R   G  +     ++  +AD+ +    A  + ++ A   D+
Sbjct: 249 LSVGIAQACLDAALKYAKEREQFGQPISKFQAIQFKLADMKMKTELARLMVYKAAWLKDQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S EAA       I K +  +      +EA++  GG GY++E  + R+ R++    I
Sbjct: 309 GQPFSMEAA-------IGKLYASETCMQNASEAVQIHGGYGYMKEYPVERYLRDAKLMEI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +  LL
Sbjct: 362 GEGTSEVQRLVIARLL 377


>gi|254303807|ref|ZP_04971165.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323999|gb|EDK89249.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 381

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 144/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDENERFPM--ETVEKMAKIGIMGIPIPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +      +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 NTPGFSIGKKEMKLGIRGSATCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IASQALGIAAGALDEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANIIK 381


>gi|188027001|emb|CAQ53135.1| butyryl-CoA dehydrogenase [Clostridium saccharobutylicum]
          Length = 379

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G+    + +          ++ I    L  +    
Sbjct: 26  PIAAEIDETEQFPM--ENVKKMAELGMMGIPFSKEVGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    TP   + +   + S                    GLTE   
Sbjct: 84  GVILSAHTSLCASVINENGTPAQKEKYLADLCSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTATLEGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTRGISAFVVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L+NK+G R+++T EL   N        L     G    MK L    +  A  
Sbjct: 190 FPGFSVGKLENKMGIRASSTTELVMENCIVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA+ Y + R      L     ++  IA++ + I AA  L ++ A      
Sbjct: 250 ALGIAEGAFEEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKIDAAKHLVYKAACKKQAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 QPYSVDAARA-------KLFAADVAMEVTTKAVQIFGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|19704118|ref|NP_603680.1| Acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328674|ref|ZP_06871191.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19714324|gb|AAL94979.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154273|gb|EFG95074.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 381

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 144/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDENERFPV--ETVEKMAKIGIMGIPIPKQYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +      +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 NTPGFSIGKKEMKLGIRGSATCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IASQALGIAAGALDEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANIIK 381


>gi|78043883|ref|YP_360552.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995998|gb|ABB14897.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 380

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 136/375 (36%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+ E  P    ++ +    GL        +         +   A       L  
Sbjct: 27  PIAAEYDEKEEIP--WQVIEKVFKAGLMNLHVPVEYGGQGVDFITEAIVAEEMAYGCLGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T    + +               P           LTE   G
Sbjct: 85  NGTFGNNALALTPLLIAGTEEQKEKFLK-------------PFCAKPNLAAFCLTEPEAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++AI +  +   D         +  +  ++  + + A V+   G   +   L  G   
Sbjct: 132 SDVSAIKTTARLEGDEWVLNGTKCFITNGGVASLYTVFATVDRSKGIKGITAFLVPGDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+   + + K+G+R++   E+   N        L  V +G    M+ L          +V
Sbjct: 192 GIYGGKKEKKMGDRASHVAEVILENVRIPRENVLGEVGSGFKIAMQTLDQTRPMIGATAV 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA+ YA+ R   G  + +   ++  +AD+A+ I AA AL ++     D+   
Sbjct: 252 GVARRALDEALKYAKERKQFGRPIAEFQAIQFMLADMAMQIEAARALVWKACWMLDQGMK 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++E A A+        +   +A  V  +A++ +GG GY+ +  + +  R++    I  G
Sbjct: 312 ATKEGAMAKC-------FASDVAMRVTVDAVQILGGYGYMRDYPVEKLMRDAKITQIYEG 364

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L K
Sbjct: 365 TNQIQRLVIGRELLK 379


>gi|310778082|ref|YP_003966415.1| butyryl-CoA dehydrogenase [Ilyobacter polytropus DSM 2926]
 gi|309747405|gb|ADO82067.1| butyryl-CoA dehydrogenase [Ilyobacter polytropus DSM 2926]
          Length = 381

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 140/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    GL      + +            A      A    
Sbjct: 26  PIAAEIDEEERFPI--ETVKKMNEIGLMGIPVPKEYGGAGGDNLMYAMAVEELSKACATT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +      L   T    K + PK+ + E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGMAPILEFGTDAQKKKYLPKMTTGEW-------------LGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +          + L+G K F+++   +  +I+ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTTAHFDEKTNEWVLNGSKIFITNAGYAHVYIIFAMTDKSKGLKGITAFILEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G + +AT EL   +     +   N+     +  KI ++ LD   + 
Sbjct: 191 DTPGFSVGKKEKKLGIKGSATCELIMEDCR---IPKENLLGAIGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   +     +L E+I+Y + R   G  +      +  +AD+     AA  L +  A  
Sbjct: 248 IASQALGISQGALDESINYVKERKQFGRSIAAFQNTQFQLADMHTKTEAARMLVYSAACK 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  S++AA A+++A        + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 KSSKKPYSQDAAMAKLLAA-------ETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 361 TEIYEGTSEVQKMVISAGLLK 381


>gi|227824886|ref|ZP_03989718.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
 gi|226905385|gb|EEH91303.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
          Length = 384

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 150/397 (37%), Gaps = 42/397 (10%)

Query: 71  QELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           ++ A  A     P +         WD+         ++   I +G     +   +     
Sbjct: 14  EQAADFAERFLAPTIEERDKN-HVWDR--------KIINEMIENGFQGICFPEEYGGAGM 64

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                I A           G  +S SV+  A+ + +  T    + +              
Sbjct: 65  DVLSYILAVEEMSKVDDGTGITLSASVSLCATPIYMFGTEEQKQKYL------------- 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
            P+ +       GLTE   GTD +A  +      D  Y L+G K F+++   ++ +++ A
Sbjct: 112 TPICEGRTIGAFGLTEPSAGTDASAQQTTAVLKGD-KYILNGSKIFITNGSEAETYVIFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   + +    G  + ++++K+G  ++ T EL F +         N+   
Sbjct: 171 MTDKSAGVHGISAFIVEKGMPGFRFGKIEDKMGGHTSLTAELIFEDCEVP---KENLLGK 227

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +  LD   + V+   + +A+     A+ Y++ R   G  +     +   +AD
Sbjct: 228 EGEGFKIAMQTLDGGRIGVAAQALGIAQGALDAAVKYSKEREQFGRSICKFQALSFKMAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ I AA  L +R AN  +E K  S  AA A+        +   +A  V  +A++  GG
Sbjct: 288 MAMKIEAARLLVYRAANLKNEGKPYSAAAAMAKC-------FASDVAMEVTTDAVQIFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY  +    R+ R +    I  G+     + +   L
Sbjct: 341 YGYTVDYPAERYMRNAKITQIYEGTNEVQRMVISRDL 377


>gi|316935141|ref|YP_004110123.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602855|gb|ADU45390.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 595

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 140/544 (25%), Positives = 230/544 (42%), Gaps = 29/544 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N Y +D  L  L+  + P      +   L+ LG         + AR+A+ +TP
Sbjct: 23  APDTTGLNFYRADPSLADLLRIHLPKALVDHIEPHLDALGALAGGR-LDDCARLADRHTP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     VE+HPA+  L   +    G+H     +             + A   
Sbjct: 82  ILHQRDRFGRDVQSVEYHPAYRELENAAFGTFGIHALSHRKGIMDWPEVYPVTAKHAFTL 141

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  + E G     +VT   A +++   +  +   +   +   +     +          G
Sbjct: 142 LFNETEFGMGCPINVTDGCAKLLSKFGSDELKAKYLDGLTQTDMSKLTQG---------G 192

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +TS      D  + L G KWF S+  +   ++LA+ EG       V
Sbjct: 193 QFMTEKEGGSDVGTLTSIAVSEGDH-WRLYGEKWFCSNADAKVVMLLARPEGAGPGTRGV 251

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+PR L+DG+PN     RLK+K+G RS A+ E++      + +G L+     + +M 
Sbjct: 252 GLFLMPRFLDDGTPNHYRIVRLKDKLGTRSMASGEIKLEGAVAYAVGKLDRGFVQMAEMV 311

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +AI  A  R V G  +ID P+ +R +  I L      ++S
Sbjct: 312 NSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIIDLPLARRQLMKILLPTEQGMSIS 371

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE + AR
Sbjct: 372 FLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEEFATAR 431

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++   SI  G+GN + +D L            L + L   L  + +           
Sbjct: 432 LLRDAHLGSIWEGTGNIVAIDALKRAIGRHGAESALAADLHARLDDAARVPQAWRDRLRG 491

Query: 493 LCKEDKGLARFLT---EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           L  +  G AR +    +  A A  A +      + +A  +  +R          +L  R 
Sbjct: 492 LIDKSIGFAREVARNSDNEADARRATSALYHVASAVALAWEGDRIEAMRGDARRVLLSRL 551

Query: 550 NAAH 553
              H
Sbjct: 552 VVEH 555


>gi|325478441|gb|EGC81555.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 642

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 142/374 (37%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    +++     G     + + +        ++ I    L  +    
Sbjct: 26  PIAFDLDQKNEFPD--DIVKEMGELGFLGIPYPKEYGGQGLDVISYAIVVEELSRVDGGV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   +  +    T    K +               P+ K     G GLTE+  
Sbjct: 84  GVICSAHTSLGSWPIFAFGTEEQKKKYL-------------TPLAKGEKLGGFGLTEENA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +  +   D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T EL F N         N+     +  KI +  LD   + +
Sbjct: 190 FEGFTFSDHYDKLGIRSSSTAELHFDNVKVP---KENLLGKEGQGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + + +     A+ YA+ R   G  +         +AD+A  +  A  + +  A   
Sbjct: 247 ASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADMATHLHGARLMIYHAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S EAA A+ +A         +A  +  EA++  GGSG+I+   + R +R++   
Sbjct: 307 ENHERYSAEAAMAKQVA-------SDLAMKIATEAVQVYGGSGFIKGVDVERFFRDAKIT 359

Query: 441 SILLGSGNAMVLDV 454
            I  G+   M + V
Sbjct: 360 QIYEGTNEIMRVVV 373


>gi|218749864|ref|NP_001136342.1| short-chain acyl-CoA dehydrogenase [Nasonia vitripennis]
          Length = 402

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 153/383 (39%), Gaps = 31/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +P     +++    GL       S                 YL   +  
Sbjct: 44  PIAGKIDQGHLYP--KEQVKKMGELGLLAMAVPESLGGTGLD----------YLAYAIAM 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +     ++  ++++  +  +      K  + +       P           L+E   G
Sbjct: 92  EEISRGCASTGVIMSVNNSLYLGP--LEKFGNDKQKEKYITPFANGDRVGCFALSEPGNG 149

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A ++  +    G Y L+G K ++++   ++  ++ A  +       +   + D   
Sbjct: 150 SDAGAASTTAKTSGSGGYLLNGTKCWITNGYEAEGIVVFATTDKAKKHKGISAFIVDKPT 209

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +       + N+   P    KI ++ LD+  + ++
Sbjct: 210 PGLSLGKKEDKLGIRGSSTCSLIFEDCKVP---EENLLGEPGMGFKIAMMTLDAGRIGIA 266

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+A     + YA +R   G  +     ++  +AD+A+ + A+  L++R A   D
Sbjct: 267 SQALGIAQASLDCAVEYATKRTAFGNAIAKLQAIQMKLADMAMRVEASRLLTWRAAYLKD 326

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A++ A     +C         +A++ +GG GY+ +    RHYR++    
Sbjct: 327 NGKPYTKEAAMAKLSASEAATFCS-------HQAIQILGGMGYVTDMPAERHYRDARITE 379

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K  NL
Sbjct: 380 IYEGTSEIQRLVIAGNLLKEYNL 402


>gi|15616361|ref|NP_244666.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176424|dbj|BAB07518.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 379

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 125/351 (35%), Gaps = 24/351 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL       ++        ++ I    L  ++      L   +    + +    T   
Sbjct: 47  ELGLMGIPIPEAYGGAEMDFTSYIIAIHELSKVSATVGVILSVHTSVGTNPILFFGTEEQ 106

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+   EY                 GLTE   G+D A + +   K  D       
Sbjct: 107 KSRFIPKLAKGEY-------------LGAFGLTEPSAGSDAANLKTTALKQGDHYRLNGS 153

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  +   +D +++ A      G   +   + +    G    + + K+G   + T EL 
Sbjct: 154 KVFITNGGAADTYVVFASTNPSAGRKGISAFIVEKETPGFTVGKKEKKMGLHGSNTTELI 213

Query: 291 FSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F +        L V   G    M  L    +  A  S+     +L  A  YA+ R   G 
Sbjct: 214 FEDALVPKENLLGVEGDGYKIAMANLEAGRIGIAAQSLGIAEAALEAATSYAKERKQFGK 273

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +  Q  +   +AD+A  + AA  L++R A    +  S ++E++ A       K +  K 
Sbjct: 274 SIGQQQAIAFKLADLATQVEAAKLLTYRAAQLKQQGISCAKESSMA-------KLFASKT 326

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A     EA++  GG GY +E  + R++R++    I  G+     + +   +
Sbjct: 327 AMKAAIEAVQIFGGYGYTKEYPVERYFRDAKVCEIYEGTSEIQRIVIHKHI 377


>gi|229020563|ref|ZP_04177305.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229026781|ref|ZP_04183113.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228734504|gb|EEL85166.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228740727|gb|EEL90983.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 376

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKD 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|229181591|ref|ZP_04308916.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228601787|gb|EEK59283.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 381

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A+L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KAILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|126455351|ref|YP_001066955.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|242315972|ref|ZP_04814988.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|126228993|gb|ABN92533.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|242139211|gb|EES25613.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 595

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|196041049|ref|ZP_03108346.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|217962831|ref|YP_002341409.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|229094456|ref|ZP_04225527.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|229142085|ref|ZP_04270610.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229199467|ref|ZP_04326130.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|301056810|ref|YP_003795021.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|196028217|gb|EDX66827.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|217063578|gb|ACJ77828.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|228584043|gb|EEK42198.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228641374|gb|EEK97680.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228688938|gb|EEL42766.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|300378979|gb|ADK07883.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 381

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|295695910|ref|YP_003589148.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411512|gb|ADG06004.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 390

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 154/386 (39%), Gaps = 38/386 (9%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  +  +  +  P    ++  S   GL        +  +        + A    + 
Sbjct: 22  QTVDPRAKEIEDKDEIPL--EIMEMSKELGLFGLSIPEEYGGLGI--GMVGKCAIYEELG 77

Query: 145 QLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +   G        +      +  M      + + P             PM +        
Sbjct: 78  KTSNGFTTVIGGHTGIGSVGIVEMGNEEQKRKYLP-------------PMARGEWIGAFA 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G++ A + +   +  D  Y L+G K F+++  ++  F ++A  +  +G   +  
Sbjct: 125 LTEPGAGSNAANLKTTAVRKGD-KYILNGSKHFITNGSIAQVFTVMAVTDPMMGPKGITS 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319
            + +    G    +++ K+G R + +VEL F +    +   L     G V  +KI   L 
Sbjct: 184 FIVERDFPGFRIGKIEEKMGLRGSHSVELFFEDCEVPVENVLGREGQGYVNALKI---LA 240

Query: 320 SAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +    ++   +      L  +I YA +R   G  + +Q +++  +A++ALDI A  +L++
Sbjct: 241 NGRAGLAARNLGSCVKLLELSIEYAFQREQFGKPIFEQQIIQHYLAEMALDIEALRSLTY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R+A   DE  +  +EAA A+++         ++   V  +A++  GG GY++E  + R+Y
Sbjct: 301 RVAWMVDEKMNVIKEAAMAKLL-------GSEVYNRVADKALQIHGGMGYMKEMPVERYY 353

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+       +   L+K
Sbjct: 354 RDARITKIYEGTSEIQKNIIAAQLKK 379


>gi|322436066|ref|YP_004218278.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163793|gb|ADW69498.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 381

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 143/373 (38%), Gaps = 25/373 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
           R ++ E     H ++++    GL   I+             + +    L  +       +
Sbjct: 27  REERDETSEFPHGIVKKLGEMGLMGVIFPEELGGSGLGYVEYVLAIEELSRVDGSVGIIV 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S +    + + L       K W  K+ + E+                 GLTE   G+D 
Sbjct: 87  ASHNSLCTNHLMLAGNEEQKKRWVTKLATGEW-------------LGAWGLTEPGSGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
             + +   +  D      G  +  +   ++  ++LA  +        +   L +    G 
Sbjct: 134 GGMRTTAVRRGDEWVLNGGKTFITNGTYANCALVLAVTDKEKKTHGGISAFLVERGTKGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T EL F +        + V   G  + M++L    +  A +S+  
Sbjct: 194 RAGKKENKLGLRASDTAELIFEDCVVPAENLVGVEGAGFKDAMRVLDGGRISIAALSLGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L  A+ YA  R   G  + +   ++  +A +A ++ AA  L+ R A   D  ++ +
Sbjct: 254 ARGALDAAMKYATERRQFGKAISEFQAIQFKLATMATELDAAWLLTMRAARMKDAGENVT 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E++ A       K +  ++A  +  E ++  GG G+I++    + YR+    +I  G+ 
Sbjct: 314 LESSMA-------KLYASEVACRICDEGVQIHGGYGFIKDYPAEKFYRDVKLCTIGEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   L K
Sbjct: 367 EIQRMVIARELLK 379


>gi|228917951|ref|ZP_04081487.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228841748|gb|EEM86859.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 381

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|294782903|ref|ZP_06748229.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294481544|gb|EFG29319.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 381

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 143/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDENERFPM--ETVEKMAKIGIMGIPIPKQYGGAGGDNLMYAMAVEELSKACGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +      +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFSIGKKEMKLGIRGSATCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IASQALGIAAGALDEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANIIK 381


>gi|312898588|ref|ZP_07757978.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
 gi|310620507|gb|EFQ04077.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
          Length = 379

 Score =  297 bits (762), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 149/359 (41%), Gaps = 25/359 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTP 168
             +G+   + +         + +    A +  Y+M   E          +   + L    
Sbjct: 37  YDEGIVAEMLEMGLAGTYFPEEYGGAGADVLSYIMTVEELA-----KYDAGISITLSADV 91

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +  +   +  + E       P+ + +      LTE   GTD A   +   K  D  Y L
Sbjct: 92  SLCANPIYEFGTEEQKAKFLKPLCEGTKLGAFALTEPNAGTDAAGQQTVAVKEGDH-YVL 150

Query: 229 SGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+++  + D +I+ A  +   G   +   + +   +G  + + ++K+G  ++ T+
Sbjct: 151 NGSKIFITNGGAADIYIVFAMTDKSQGTKGISAFILEKGMDGFTFGKKEDKMGIHTSQTM 210

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
           EL F N         N+     +  KI ++ LD   + V+   + +AE     AI Y+++
Sbjct: 211 ELVFQNVKVPA---ENLLGQEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAIEYSKQ 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L     +   +A++A  I AA  L ++ A   +E K  S +AA A++      
Sbjct: 268 RVQFGKPLCKFQAISFKLAEMATKIEAARQLVYKAAMRKEEKKPYSVDAAMAKM------ 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +   +A  V  +A++  GG GY EE  +ARH R++    I  G+  A  L +   + +
Sbjct: 322 -YASDIAMEVTTDAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEAQRLVISGNILR 379


>gi|229164291|ref|ZP_04292223.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228619174|gb|EEK76068.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 381

 Score =  297 bits (762), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KDILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKD 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALTCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A ++ AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATNVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVSIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|167919739|ref|ZP_02506830.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
          Length = 597

 Score =  297 bits (762), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|134278016|ref|ZP_01764731.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167816609|ref|ZP_02448289.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|134251666|gb|EBA51745.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 597

 Score =  297 bits (762), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|94969396|ref|YP_591444.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551446|gb|ABF41370.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 380

 Score =  297 bits (762), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 148/373 (39%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +WD+    P   A ++     GL   I+   +            A           G ++
Sbjct: 30  KWDEACEFPL--ATVKELGKLGLLGIIFPVEYGGAGMGYVEYATAIEELSRVDGSVGIIV 87

Query: 153 SPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   +  ++ + L       + + PK+ + E+                 GLTE   G+D 
Sbjct: 88  AAHTSLCSNHIFLAGNEEQKRKYIPKLATGEF-------------IGAWGLTEPGSGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
               +   +  D  + L+G K F+++   +D  +++A  +       +   L D    G 
Sbjct: 135 GGARTTAVRKGD-KWVLNGTKTFITNGHYADVVVVIAVTDKAAHTHGLSAFLVDAGTKGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T EL F +    L   L     G ++ M+IL    +  A + +  
Sbjct: 194 KLGKKENKLGLRASDTAELIFEDCEIPLANLLGKEGDGFIDSMRILDGGRISIAALGLGM 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A  Y++ R   G  + +   ++  +AD+A +I AA  L++R A   D     +
Sbjct: 254 AQGAYEAARDYSKERKQFGKAISENQAIQWKLADMATEIDAARLLTWRAAWMKDSGMKTT 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E++ A       K +  ++A  V  E ++  GG G+I++    + YR+    +I  G+ 
Sbjct: 314 LESSMA-------KLYTSEVAVRVANEGVQIHGGYGFIKDYPAEKFYRDVKLCTIGEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               L +   + K
Sbjct: 367 EIQRLVISRQILK 379


>gi|237813068|ref|YP_002897519.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|237505300|gb|ACQ97618.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
          Length = 595

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|325292117|ref|YP_004277981.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325059970|gb|ADY63661.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 594

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 113/554 (20%), Positives = 201/554 (36%), Gaps = 90/554 (16%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEF 99
           L   ++         L  LGE V+    QE  R A      L       G R    KV  
Sbjct: 19  LQDALSRGA------LGDLGEDVVDAILQEAGRFATEQVAPLADIGDRQGARLSDGKVST 72

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              W  L RR    G +       F        H +  A L +         ++P++T  
Sbjct: 73  PDGWADLYRRWAEAGWNSLTAPEEFGGQNLP--HMLNVAALEMWNSGSMAFALAPTLTMG 130

Query: 160 SMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL    +  + + + PK+ S E+  T             + LTE   G+D+  + ++
Sbjct: 131 AVEALVAHGSNDLKRIYLPKLVSGEWTGT-------------MNLTEPHAGSDLGVLKTR 177

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
            ++  DG Y + G K F++    DA      ++LA++         +  FLVP+ L +  
Sbjct: 178 AERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLPEDD 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMK 313
              GS N +    L++K+G   + T  + F +          G+L+G+ N     +  M 
Sbjct: 238 GTPGSRNDVFCHSLEHKLGIHGSPTCTMIFGDGKFGEEKGALGWLIGEENKGLACMFTMM 297

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIAL 364
               L   +  V+    +  +AI YAR R               +I+ P + R +  +  
Sbjct: 298 NNARLAVGMQGVAICEAATQKAIEYARERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKA 357

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMEC 418
               A A+SF  A++ D A +  + A  A        + PI K +       V +  ++ 
Sbjct: 358 LTQGARAISFNCAHAIDMAHAAEDVAERAHWQERAALLTPIAKSFSTDAGVDVASMGIQV 417

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
            GG G+IEE   AR+ R++    I  G+       L V  L            + L + +
Sbjct: 418 HGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVVRKLPLSDGAQVRGFIAELREIV 477

Query: 477 GSSGKKVITILRDSISLCK----EDKGLARFLTEKI-------------------ALASS 513
             +     + L ++    +    + +    +L E++                    LA +
Sbjct: 478 ARTAASNRSDLGETARYLETSLADLETATDWLLERLKAGETETALAGATPYQRLFGLALT 537

Query: 514 AAALYRAGMNDIAD 527
            A L +  +  + D
Sbjct: 538 GAYLAKGALAQVDD 551


>gi|149277315|ref|ZP_01883457.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Pedobacter sp. BAL39]
 gi|149232192|gb|EDM37569.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Pedobacter sp. BAL39]
          Length = 379

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 112/291 (38%), Gaps = 11/291 (3%)

Query: 174 WAPKIFSREYDPTNKA-PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           +  + F  E+       P+          L+E   G+D  +  +  +   D         
Sbjct: 96  YGLESFGTEFQKEKYLKPLAAGEKIGAFCLSEPEAGSDATSQQTTAEDKGDHYLLNGTKN 155

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +   +  ++++AQ +  +    +   + +    G      +NK+G R + T  L F+
Sbjct: 156 WITNGSTASTYLVIAQTDRSLKHKGINAFIVEKGMEGFTIGPKENKMGIRGSDTHSLMFN 215

Query: 293 NTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +        +     G    MK L    +  A  ++     +   A+ YAR+R   G  +
Sbjct: 216 DVKVPKENRIGEEGFGFKFAMKTLEGGRIGIAAQALGIAAGAYELALDYARQRKSFGKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +   +   +AD+A  I AA  L ++ A   D+ K  +   + A       K +  K+A 
Sbjct: 276 AEHQAVAFKLADMATQIEAARMLVYKAAWLKDQGKPYTLAGSMA-------KLYASKVAM 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V  EA++  GG G+++E  + R  R++    I  G+     L +   L K
Sbjct: 329 EVTTEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQKLVISRELIK 379


>gi|262067060|ref|ZP_06026672.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291379227|gb|EFE86745.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 381

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 143/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDENERFPM--ETVEKMAKIGIMGIPIPKQYGGAGGDNLMYAMAVEELSKACGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +      +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   +  +I+ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYIVFAMTDKSKGLKGISAFIVES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFSIGKKEMKLGIRGSATCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IASQALGIAAGALDEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANIIK 381


>gi|306820834|ref|ZP_07454458.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551152|gb|EFM39119.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 379

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 138/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++E  P     + + +  G       + +          I A           
Sbjct: 26  PNAAEVDELERFP--RENVEKMVKAGFMGIPIAKKYGGEGGDNLGYIMAVEELSRVCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A  +    T    + +               P+ +       GLTE   
Sbjct: 84  GVILSAHTSLGAGPIEKFGTEEQKQKYL-------------VPLAQGKHLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++   SD +I++A  +   G   +   + +  
Sbjct: 131 GTDASMQQTTAVKNGDH-YILNGSKIFITNGDESDTYIVMAMTDKSQGNRGISAFIVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G      + K+G R +AT EL F +         N+ +   +  K+ +  LD   + +
Sbjct: 190 FKGFSTGPHEKKMGIRGSATCELIFEDCIVPA---ENLLSQEGKGFKVAMQTLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E I Y + R   G  L      +  +AD+A  I AA  L ++ A   
Sbjct: 247 AAQALGIAQGALDETIAYVQERKQFGRSLSKFQNTQFQLADLANMIEAARLLVYKAAFCK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     S  AA+A       K +  + A  V  + ++  GG GY  +  + R  R++   
Sbjct: 307 DNGLPYSVPAAHA-------KLFAAETAMKVTTKCVQLFGGYGYTRDYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 360 EIYEGTSEVQRMVISGSLLK 379


>gi|228988569|ref|ZP_04148656.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771186|gb|EEM19665.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 381

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEVLQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|229193595|ref|ZP_04320539.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228589900|gb|EEK47775.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 381

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +   +GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTSGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALGCAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|217420505|ref|ZP_03452010.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|217395917|gb|EEC35934.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 597

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|188587833|ref|YP_001920705.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|188498114|gb|ACD51250.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 379

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          ++            
Sbjct: 26  PIAKEIDESMRFPE--ENVAKMAEMGLLGIPFSEEYGGAGMDTLSYVQCVEELSKCCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A+ +    T      +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLCATPIHTFGTEEQKVKYLKPLASGE-------------KLGAFGLTEPVA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASMQKTTAVLEGDH-YVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G R+++T EL F N       LLG+     G          +  A  
Sbjct: 190 FPGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIAMSTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ E + Y + R   G  +      +  +A +     AA  L ++ A + D+ 
Sbjct: 250 ALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAKLLVYQAACAKDDH 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA A+++A        + A  V    ++  GG GY  +  I R  R++    I 
Sbjct: 310 EKYTHLAAMAKLVA-------SRNATNVTNRCLQLFGGYGYSSDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+    ++ +   + +
Sbjct: 363 EGTSEVQMMVISGWMLR 379


>gi|25453062|sp|Q9FS88|IVD1_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 1, mitochondrial;
           Short=IVD 1; Flags: Precursor
 gi|10129808|emb|CAC08233.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum]
          Length = 412

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  E+ D+    P    L +      LH       +  + +    H I    +   +   
Sbjct: 55  PYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGGLNLGYLYHCIALEEISRASGAV 114

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A      S    + +    TP   + + PK+ S ++                L ++E   
Sbjct: 115 AVSYGVQSNVCINQLVRNGTPDQKQKYLPKLISGDH-------------IGALAMSEPNA 161

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++  G        W  + P+++  I+ A+ +   G   +   + +   
Sbjct: 162 GSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGITAFIIEKEM 221

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N F      L      V  +     L  L  A   
Sbjct: 222 PGFSTAQKLDKLGMRGSDTCELVFENCFVPKENVLGQEGKGVYVLMSGLDLERLVLAAGP 281

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   I Y R+R   G  + +  +++  +AD+   + ++ +  + +A   D  K
Sbjct: 282 VGIMQACMDIVIPYVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGK 341

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++          T     + A  V  +A++C+GG+GYI E    R  R++    I  
Sbjct: 342 IDPKD-------CSGTILLAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAA 394

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L K
Sbjct: 395 GTSEIRRLVIGRELFK 410


>gi|75759071|ref|ZP_00739178.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218900468|ref|YP_002448879.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228905096|ref|ZP_04069128.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|74493470|gb|EAO56579.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218542511|gb|ACK94905.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228854539|gb|EEM99165.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 381

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++  + GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEVLQKMGNLGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKKKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|53719939|ref|YP_108925.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|52210353|emb|CAH36332.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
          Length = 597

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|126441421|ref|YP_001059673.1| Acyl-CoA dehydrogenases [Burkholderia pseudomallei 668]
 gi|126220914|gb|ABN84420.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 599

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LRPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|149183596|ref|ZP_01862016.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1]
 gi|148848686|gb|EDL62916.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1]
          Length = 560

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 112/491 (22%), Positives = 207/491 (42%), Gaps = 31/491 (6%)

Query: 34  MNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
            N Y  D   + L+            HKEL   G        +          P+L  Y 
Sbjct: 5   KNFYLEDPHFINLLNSSMNEEMREWAHKELIEFGRMCAGEIDERAVHTDREGQPRLIKYD 64

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE   ++  +  +   ++ + + G+   I  +    + RK  +    A+ YL++Q E 
Sbjct: 65  RFGEDISEIWVNEGYKQTVKDTYNKGIVGYI-HKEIPELGRKGNYLYSYAQGYLLSQSEP 123

Query: 149 GHLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     +  + +A ++    +  +   + P + S       +             LTE++
Sbjct: 124 GFYCPVTLTMATAYLLEHYASEEIKDRFLPHVLSTGEVELYEGATF---------LTERQ 174

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV------GCFLVP 259
           GG+D+ A  ++  K     Y L G K+F S+  M    ++LA++EG          F VP
Sbjct: 175 GGSDVGANDTKAVKSG-ESYRLYGEKYFASNSGMCGVAMVLARMEGAKQGSKGLSLFAVP 233

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              EDG  NG+  +RLK+K+G R+  + E+EF     FL+G+ +     + +   L  + 
Sbjct: 234 WRKEDGKLNGIKIRRLKDKLGVRAVPSAEVEFDGAEAFLVGEASRGIHYMMEALNLSRVC 293

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +AI S+  MR +  EA +YA  R   G  L + P++K  + ++A+     T+  F L   
Sbjct: 294 NAIASIGIMRRAYMEARNYAFHREAFGKKLAEYPMVKETLTNLAVKQEIETSAVFSLVEL 353

Query: 380 FD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           FD     E     +E    R++  + K    + A     EA+E  GG+G+IE+  + R  
Sbjct: 354 FDKVMSHEHPVSEKEMVLNRLLIALLKKETAEQAIHFSHEAIEMHGGNGFIEDFVLPRLL 413

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++   ++  G+ N + L++L L+ +           + + L S    + ++ +  I   
Sbjct: 414 RDAQVLTVWEGTANILGLEILRLMNR-HKAHMLFIEEMRKKLNSVSASLDSLKKPVIGGL 472

Query: 495 KEDKGLARFLT 505
            E + L  ++ 
Sbjct: 473 NELEELTEYVA 483


>gi|150017731|ref|YP_001309985.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904196|gb|ABR35029.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          I+            
Sbjct: 26  PIAKEIDESMRFPE--ENVAKMAEMGLLGIPFPEEYGGAGMDTLSYIQCVEELSKCCGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A+ +    T    + +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLCATPIYTFGTDAQKEKYLKPLASGE-------------KLGAFGLTEPVA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASMQKTTAVLDGDN-YILNGSKIFITNAGYADTYIVFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G R+++T EL F N       LLG+     G          +  A  
Sbjct: 190 FPGFSVGSHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIAMATLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ E + Y + R   G  +      +  +A +  +  AA  L ++ A + D+ 
Sbjct: 250 ALGIAEGAIEETVKYVKERVQFGKSIAQFQNTQFELAQMRANTEAAKLLVYQAACAKDDH 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +        +A + K +  + A  V    ++  GG GY  +  I R  R++    I 
Sbjct: 310 QKFT-------HLAAMAKLFAARNATDVTNRCLQLFGGYGYTSDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+    ++ +   + +
Sbjct: 363 EGTSEVQMMVLSGWMLR 379


>gi|237740005|ref|ZP_04570486.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31]
 gi|229422022|gb|EEO37069.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31]
          Length = 381

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 143/381 (37%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+      + +            A      A    
Sbjct: 26  PIAAEVDENERFPM--ETVEKMAKIGIMGIPIPKQYGGAGGDNLMYAMAVEELSKACGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +      +  + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD A   +   +  + G + L+G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F N     +   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFSIGKKEMKLGIRGSATCELIFENCR---IPKENLLGDKGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A     EAI+YA+ R   G  L      +  IA++ + + AA  L ++ A  
Sbjct: 248 IASQALGIAAGALEEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWR 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  S +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNNLPYSLDAARA-------KLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   + K
Sbjct: 361 TEIYEGTSEVQRMVIAANIIK 381


>gi|76809492|ref|YP_334166.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|167911738|ref|ZP_02498829.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|254259404|ref|ZP_04950458.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|254296987|ref|ZP_04964440.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|76578945|gb|ABA48420.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
 gi|157807916|gb|EDO85086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|254218093|gb|EET07477.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 597

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|254191357|ref|ZP_04897861.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157939029|gb|EDO94699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 595

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 19  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 78  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 132

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 133 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF--------- 183

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 184 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 243

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 244 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 303

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 304 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 363

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 364 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 423

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 424 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 482

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 483 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 518


>gi|254184327|ref|ZP_04890917.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184214858|gb|EDU11901.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 597

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|94984843|ref|YP_604207.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555124|gb|ABF45038.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 379

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 144/395 (36%), Gaps = 30/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q+LAR             P    +D+ E  P    ++ ++   GL           + 
Sbjct: 12  QLQQLARDFTR-----KEIIPVAAEYDQKEELP--WQVVEKAFEVGLLNIAIPEHAGGLG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                +           +    ++  S    + + +  T    K +              
Sbjct: 65  LGMLDECIIGEELAYGCMGIYTVLMASELGITPILVGGTEEQQKRFL------------- 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ +        L+E   G+D AA+++      D         W  +  ++D  ++ A 
Sbjct: 112 TPLTEKPALAAFALSEPNNGSDAAAMSTTAVLDGDEWVINGTKMWISNGGVADITVVFAT 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTG 307
              + G      L+      G  + ++K+K+G R++ T EL F N        L  V  G
Sbjct: 172 TNRQGGHRATVALVVPKDAPGFSFNKIKHKMGQRASLTSELVFENVRVPKENQLGGVGDG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               MK L    +  A  SV   R +L E++ YA++R   G  +     ++  +A++A+ 
Sbjct: 232 FKIAMKTLDKTRIPVAAGSVGVARRALEESLKYAKQREAFGQPIAQFQAIQFKLAEMAMG 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I     ++++ A   D+      E+A       I K +C +MA     EA++  GG GY+
Sbjct: 292 IETGRLMTWKAAWLVDQGLPHGYESA-------IAKAYCSEMAFDAANEAIQIHGGYGYV 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            E  + +  R+   N I  G+     + +   L +
Sbjct: 345 GEYPVEKLLRDVKLNQIYEGTNEIQRVVISRHLLR 379


>gi|293401546|ref|ZP_06645689.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305184|gb|EFE46430.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 379

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 137/393 (34%), Gaps = 34/393 (8%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ- 131
            A  A  +   L          D+ E  P     + +     +    + R +        
Sbjct: 16  FAEFAEKDVKPL------AAEVDEDERFP--RENVEKMRECKMLGIPFPREYGGAGADYL 67

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           ++ +    L          L + +      +    T      + P + +           
Sbjct: 68  SYILAVEELSKKCGTTGVVLSAHTSLGTWPIFAFGTEEQKNRYLPDLCTG---------- 117

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
                    GLTE   GTD A   +   K  D  Y L+G K F+++   +D +++ A  +
Sbjct: 118 ---KKLAAFGLTEPNAGTDAAGQQTTAVKDGDD-YILNGTKIFITNAGEADVYVIFAMTD 173

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
              G   +   + +    G    + + K+G R +AT EL F+N       LLG       
Sbjct: 174 KSKGTHGISAFIVEKGMPGFTVGQHEKKLGIRGSATSELIFNNVRLSKDQLLGQEGKGFK 233

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     +  A  ++   + ++ E + Y + R   G  +      +  +AD+ +   
Sbjct: 234 IAMMTLDGGRIGIAAQALGIAQGAIDEVVPYVKSRKQFGRPISKFQNTQFQLADMQVKTD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L ++ A + +  +  +        +A   K +  ++A  V  +A++ +GG GY  +
Sbjct: 294 AARLLVYQAAMAKENGQPYT-------YLAAEAKLFAAEVAMEVTTKAIQLMGGYGYTRD 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R +R++    I  G+     + +   + K
Sbjct: 347 YPVERMFRDAKITEIYEGTSEVQRMVISGQMLK 379


>gi|330818979|ref|XP_003291544.1| hypothetical protein DICPUDRAFT_49903 [Dictyostelium purpureum]
 gi|325078282|gb|EGC31942.1| hypothetical protein DICPUDRAFT_49903 [Dictyostelium purpureum]
          Length = 417

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 134/375 (35%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK EF P    +++++   G                +            A +  
Sbjct: 63  PFAEKWDKEEFFP--REVMKQAAELGFGGLYVKEDVGGSGLSRLDASIIIEALASADVST 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++ +  T    + + P + + E                   LTE   G
Sbjct: 121 TAFISIHNMCAGLIDIYGTEEQRQKYLPSLVTME-------------KIASYCLTEPGSG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A+++++  +  D         +      S+ ++++ +  G  G   +  LL +    
Sbjct: 168 SDAASLSTKAVRDGDHFILNGSKAFISGGGDSEVYLVMVRT-GEKGPKGISCLLIEKDTP 226

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL + + + K+G  +  T  L F +       L+G          +      ++    S+
Sbjct: 227 GLSFGKKEEKLGWNTQPTRALIFEDCRVPVANLIGGEGQGFNIAMNALNGGRINIGACSL 286

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + SL  A  + + R      L     ++  +AD+A  + A+  +    A   D    
Sbjct: 287 GGAQASLVAARDHVKVRKQFNQPLEKFQSIQFKLADMATKLHASRVMIRTAATMLDNKDP 346

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K + C     V  ++++  GG GY+++  + R+ R+   + IL G
Sbjct: 347 S------AHVYIAMAKLFACDECFKVCDDSLQLFGGYGYLKDYPVERYLRDLRVHRILEG 400

Query: 446 SGNAMVLDVLNLLEK 460
           S   M L     + K
Sbjct: 401 SDAVMRLLTSREILK 415


>gi|167903488|ref|ZP_02490693.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
          Length = 601

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAIAHVARTGDDAFVRQAASALY-HATTAI 520


>gi|229064992|ref|ZP_04200290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229170051|ref|ZP_04297742.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228613398|gb|EEK70532.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228716293|gb|EEL68005.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 376

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + A+  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGLGFKLADMATSVEASRLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|251777659|ref|ZP_04820579.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243081974|gb|EES47864.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 379

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          ++            
Sbjct: 26  PIAKEIDESMRFPE--ENVAKMAEMGLLGIPFSEEYGGAGMDTLSYVQCVEELSKCCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A+ +    T      +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLCATPIHTFGTEEQKVKYLKPLASGE-------------KLGAFGLTEPVA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASMQKTTAVLEGDH-YVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G R+++T EL F N       LLG+     G          +  A  
Sbjct: 190 FPGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIAMATLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ E + Y + R   G  +      +  +A +     AA  L ++ A + D+ 
Sbjct: 250 ALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAKLLVYQAACAKDDH 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA A+++A        + A  V    ++  GG GY  +  I R  R++    I 
Sbjct: 310 EKYTHLAAMAKLVA-------SRNATNVTNRCLQLFGGYGYSSDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+    ++ +   + +
Sbjct: 363 EGTSEVQMMVISGWMLR 379


>gi|182625512|ref|ZP_02953283.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|177909200|gb|EDT71665.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
          Length = 379

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 144/377 (38%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  E  P     +++    G+    + + +        ++ +    L  +    
Sbjct: 26  PIAAEIDVTERFPM--ENVKKMAKLGMMGIPFSKEYGGAGGDTLSYILTVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    TP   + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCASLIDQFGTPAQKEKYL-------------TPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  ++D FI+ A  +   G   +   + + +
Sbjct: 131 GTDAAGQQTTAVLEGDN-YILNGSKIFITNGGVADTFIIFAMTDKSQGTRGISAFIVEKN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L+ K+G R+++T EL   N        +     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EA+ Y + R      L     ++  +A++   I AA  L ++ A   +E 
Sbjct: 250 ALGIAEGALEEAVAYMKERKQFCRSLSAFQGLQWMVAEMDTKIEAARFLVYKAACLKEEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 KPYSIDAARA-------KLFAADVAMEVTTKAVQLFGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|309774765|ref|ZP_07669787.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917450|gb|EFP63168.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 634

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 139/371 (37%), Gaps = 32/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P+    + +    GL    + + +            A           G ++S 
Sbjct: 32  DKENEFPS--EAIAKFGKMGLMGIPYPKEYGGAGLDVLSYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +         + +               P+ K       GLTE   G+D A 
Sbjct: 90  HVSLGSYPIFAFGNEEQKQKYL-------------VPLAKGEKIGAFGLTEPNAGSDAAG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D      G  +  ++  +D +++ A     +G   +   + +   +G  + 
Sbjct: 137 TETTAVLEGDHYILNGGKIFITNADKADTYVVFASTNPDMGTRGISAFIVEKGWDGFTFG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSL 332
              +K+G RS++T EL F++         N+     +  KI +  LD   + ++   + +
Sbjct: 197 DHYDKMGIRSSSTAELIFNDVKVP---KENLLGKEGQGFKIAMSTLDGGRIGIAAQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ YA+ R   G  +  Q V+   +AD+A  +  A  L +  A   +  +   
Sbjct: 254 AQGAYEHALEYAKERVQFGKPIAQQQVISFKLADMATKLRCARMLIYSSAELKENHEPYG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+A A+        +   +A  +  +A++  GGSGY++   + R YR++   +I  G+ 
Sbjct: 314 MESAMAKQ-------YASDVALEICNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGTN 366

Query: 448 NAMVLDVLNLL 458
               + + + +
Sbjct: 367 EIQRVVIASHI 377


>gi|188588331|ref|YP_001919795.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|251778721|ref|ZP_04821641.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|188498612|gb|ACD51748.1| butyryl-CoA dehydrogenase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083036|gb|EES48926.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 379

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 144/377 (38%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+    + + F        ++ +    L  +    
Sbjct: 26  PIAAEVDETERFPM--ENVEKMGKIGMMGIPFAKEFGGAGGDVLSYIMTVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    TP     + P++                      GLTE   
Sbjct: 84  GVIVSAHTSLCASVINEHGTPDQKAKYLPELCQG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTAVLDGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L++K+G R ++T EL   +        +     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA++Y + R      L  Q  ++  IA++ + I AA  L ++ A      
Sbjct: 250 ALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAARHLVYKAACKKQNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +  ++A  V  +A++  GG GY ++  + R  R++    I 
Sbjct: 310 QPYSVDAARA-------KLFAAEVAMDVTTKAVQIFGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|121600118|ref|YP_993575.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|167003817|ref|ZP_02269597.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|121228928|gb|ABM51446.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|243060716|gb|EES42902.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 597

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 135/530 (25%), Positives = 231/530 (43%), Gaps = 36/530 (6%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGE 63
              M +  + +         P   G+N ++SD    AL+              EL  LG 
Sbjct: 1   MNMMKETFEANAPAAGAANIPDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGL 60

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
              S     LA  A+ N P L      GE  + ++ HP +  L R +       ++  R 
Sbjct: 61  RA-SDELDRLASRADRNPPVLQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRD 119

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181
             P        ++ A  +L  Q E G     S+T +    L    +  + + + P++ SR
Sbjct: 120 GAPPP-----LVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASR 174

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSS 237
           ++D   +  M          +TE+  G+D+  I ++  +         + L G KWF S+
Sbjct: 175 DFDVLYQGAMF---------MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSN 225

Query: 238 PMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +D  ++LA+ EG       +  FL+P+ L DGS N     RLK+K+G+RS A+ E+  
Sbjct: 226 ADADLAMVLARPEGAPDGVKGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIAL 285

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                +L+G++      + DM  +  L + + +   MR +  EA+H AR R   G  LID
Sbjct: 286 DGAEAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLID 345

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPA 410
            P+M+R +  + +    A +L  ++A    +A +  ++     RI+  + K+  C+ A  
Sbjct: 346 MPLMQRQLVKMLVPTEQARSLFMQIALLLAKADTGDAQAGGCVRILTLLVKFRACRDARR 405

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V  +AME  GG+GYIEE S AR  R++   SI  G+ N + LDV   +++   L   L +
Sbjct: 406 VAGDAMEVRGGTGYIEEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRA 464

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
            L   L ++       T LR ++    +         +   +  +A+ALY
Sbjct: 465 FLLGALDTARLPGASATRLRRALDRASDAIAHVARTGDDAFVRQAASALY 514


>gi|167825010|ref|ZP_02456481.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|226195529|ref|ZP_03791117.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225932489|gb|EEH28488.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 597

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAITHVARTGDDAFVRQAASALY-HATTAI 520


>gi|150015212|ref|YP_001307466.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901677|gb|ABR32510.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 141/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +     +    + + F        ++ I    L  +    
Sbjct: 26  PIAAEIDESERFPM--ENVEKMAKLKMMGIPFSKEFGGAGGDVLSYIISVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    T      + P + S                    GLTE   
Sbjct: 84  GVILSAHTSLCASVINENGTNEQRAKYLPDLCSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTAVLEGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIM 323
             G    +L+NK+G R+++T EL   N        L     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLENKMGIRASSTTELVMENCIVPKENLLSKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA++Y + R   G  L     ++  IA++ + I AA  L +  A      
Sbjct: 250 ALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKYLVYLAATKKQAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 EPYSVDAARA-------KLFAADVAMEVTTKAVQIFGGYGYTKEYPVERMMRDAKICEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|167846523|ref|ZP_02472031.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
          Length = 597

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAITHVARTGDDAFVRQAASALY-HATTAI 520


>gi|192290292|ref|YP_001990897.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284041|gb|ACF00422.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 595

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 137/518 (26%), Positives = 225/518 (43%), Gaps = 39/518 (7%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N Y +D  L  L+  + P      +   L+ LG         E AR+A+ +TP
Sbjct: 23  APDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGALAGGR-LDECARLADRHTP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     VE+HPA+  L   +    G+H     +             + A   
Sbjct: 82  ILHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVYPVTAKHAFTL 141

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  + E G     +VT   A +++      +   +   +   +     +          G
Sbjct: 142 LFNETEFGMGCPINVTDGCAKLLSKFGDEALKAKYLDGLTQTDMSKLTQG---------G 192

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +TS      D    L G KWF S+  +   ++LA+ EG       V
Sbjct: 193 QFMTEKEGGSDVGTLTSVAVPDGDHF-RLYGEKWFCSNADAKVVMLLARPEGAGPGTRGV 251

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+PR L+DG PN     RLK+K+G RS A+ E++      + +G L+     + +M 
Sbjct: 252 GLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQMAEMV 311

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +AI  A  R V G  ++D P+ +R +  I +      ++S
Sbjct: 312 NSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQGMSIS 371

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE + AR
Sbjct: 372 FLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEEFATAR 431

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------KVIT 485
             R++   SI  G+GN + +D L            L + L   L  + +       ++  
Sbjct: 432 LLRDAHLGSIWEGTGNIVAIDALKRAIGRHGAESALAADLHARLDDAARVPQAWRDRLRG 491

Query: 486 ILRDSISLCK------EDKGLARFLTEKIALASSAAAL 517
           ++  SI   +      E++  AR  T  +   +SA AL
Sbjct: 492 LIDRSIGFARDVARNSENEADARRATSSLYHVASAVAL 529


>gi|254195904|ref|ZP_04902330.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|169652649|gb|EDS85342.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
          Length = 597

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLGALDTARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  +A+ALY      I
Sbjct: 485 RALDRASDAITHVARTGDDAFVRQAASALY-HATTAI 520


>gi|56965647|ref|YP_177381.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56911893|dbj|BAD66420.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 380

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 133/361 (36%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-V 162
             +L++    GL        F          I A           G +MS   +  +M +
Sbjct: 40  RDVLKQMGELGLMGVPVPEEFGGTGMDFVSYIIAVHEVSKVSAAIGLIMSVHTSVGTMPI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + PK+ + E                   LTE   G+D  A+ ++  K  
Sbjct: 100 VAYGTETQKKAYVPKLATAE-------------AIGAFCLTEPNAGSDARALQTRAVKKG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +G        +  +   +D +++ A  +   G   +   + +    GL   + + K+G  
Sbjct: 147 EGYVLNGSKVFITNGGEADTYLVFAVTDADKGAKGISCFIVEAGTPGLIVGKKERKLGLA 206

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T E+ F +       +LG+                +  A  ++     +L  A  YA
Sbjct: 207 GSTTTEIIFEDCKVPQTQMLGEEGQGLKIALSNLNAGRIGIAAQALGIAEAALEAACTYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L++   +   +AD+A +  AA  L++  A   +     ++EA+ A      
Sbjct: 267 NERKQFGKKLLNHQGLAFKLADMATETEAAKQLTYAAARLKEAGTPCAKEASMA------ 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  + A  V  +A++  GG GY++E  + R++R++ A  I  G+     + +    E
Sbjct: 321 -KLFASRTAMDVATKAVQVFGGYGYMKEYPVERYFRDAKACEIYEGTSEIQKMVIARQFE 379

Query: 460 K 460
           K
Sbjct: 380 K 380


>gi|229176018|ref|ZP_04303513.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228607450|gb|EEK64777.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 376

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLVIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMRVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVGVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|229000130|ref|ZP_04159700.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229007651|ref|ZP_04165244.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228753602|gb|EEM03047.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228759667|gb|EEM08643.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 381

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 140/363 (38%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
             +L++    GL        +          I A           G +++   +   + +
Sbjct: 43  REILKKMGELGLMGIPAPAKYGGAEMDFISYILAIEELSKVSATIGVILAVHTSVGTNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKQG 149

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++   +D +I+ A      G   +   + +    GL   + ++K+G 
Sbjct: 150 D-YYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISAFIVEKDTQGLIVGKDEHKMGL 208

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----A 335
             + TV+L F +    +    N+     +  K+ +  LD   + +    + +AE     A
Sbjct: 209 LGSRTVQLTFEDMKVPV---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E      
Sbjct: 266 VDYAKERQQFGKPIAAQQGLGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------ 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L + 
Sbjct: 320 -ASIAKLFASKTAVDVAIEAVQVFGGYGYTKDYPVERFFRDAKICEIYEGTSEIQRLVIS 378

Query: 456 NLL 458
             L
Sbjct: 379 RAL 381


>gi|205375296|ref|ZP_03228086.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
 gi|205375427|ref|ZP_03228216.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 378

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 141/379 (37%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ER +  EF      +L +    GL        +        ++ I    L  ++   
Sbjct: 26  PFVERMEAGEFP---RLILSKMAELGLMGMTIPEEYGGAGMDFTSYIIAIHELSKVSATL 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    +    + +  K+ S +Y                  LTE   
Sbjct: 83  GVVLSVHTSVGTNPILYFGSEEQKQKYVTKLASGQY-------------LGAFCLTEPSS 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ ++     D         +  +   +D +++ A  +   G   +   + +   
Sbjct: 130 GSDAGSLRTRAVLEGDQYRLNGSKIFITNGGEADTYVVFASTDPEKGTRGISAFIVEKDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + + K+G   + TV+L F +         N+     E  KI +  LD   + ++
Sbjct: 190 PGLVIGKDEEKMGLHGSRTVQLTFEDMLVPAS---NLLGAEGEGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EA+ YA+ R   G  +  Q  +   +AD+   I A+  L ++ AN   
Sbjct: 247 AQALGIAEAAFDEAVEYAKERVQFGKPIAAQQGLAFKLADMGTAIEASKLLVYQGANLRT 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +   +EA+ A       K +  K A  V  EA++  GG GY E+  + R++R++    
Sbjct: 307 EGRPCGKEASMA-------KLFASKTAVHVTTEAIQVFGGYGYTEDYPVERYFRDAKVTE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 360 IYEGTSEIQRVVLGKHLLK 378


>gi|227500885|ref|ZP_03930934.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227216989|gb|EEI82374.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 642

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 142/374 (37%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    +++     G     + + +        ++ I    L  +    
Sbjct: 26  PIAFDLDQKNEFPD--DIVKEMGELGFLGIPYPKEYGGQGLDVISYAIVVEELSRVDGGV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   +  +    T    K +               P+ K     G GLTE+  
Sbjct: 84  GVICSAHTSLGSWPIFAFGTEEQKKKYL-------------TPLAKGEKLGGFGLTEENA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +  +   D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAELDGD-YYILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T EL F N         N+     +  KI +  LD   + +
Sbjct: 190 FEGFTFSDHYDKLGIRSSSTAELHFDNVKVP---KENLLGKEGQGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + + +     A+ Y + R   G  +         +AD+A ++ AA  + +  A   
Sbjct: 247 ASQALGIGQGAYESALAYGKEREQFGLPIAHLQANTFKLADMATNLHAARLMIYTAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S EAA A+        +   +A  +  EA++  GGSG+I+   + R +R++   
Sbjct: 307 ENHERYSAEAAMAKQ-------FASDLAMKITTEAIQIYGGSGFIKGVDVERFFRDAKIT 359

Query: 441 SILLGSGNAMVLDV 454
            I  G+   M + V
Sbjct: 360 QIYEGTNEIMRVVV 373


>gi|225009980|ref|ZP_03700452.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-3C]
 gi|225005459|gb|EEG43409.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-3C]
          Length = 380

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 131/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS- 153
           D+ +  P     +++    G    + D S+          + A          A  +MS 
Sbjct: 32  DETQTFPI--QEIKQLAELGFMGMMVDPSYGGSGLDTMSYVLAMEELSKIDASASVIMSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +      +  + + P +                       L+E   G+D  +
Sbjct: 90  NNSLVCWGLEKYGNTQQKEKYLPDLC-------------NGKKIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             ++  K  D         W  +   +  ++++AQ + + G   +   + +    G    
Sbjct: 137 QKTRAVKKGDYYEITGTKNWITNGSSASIYLVIAQTDPKKGSKGISAFIVEKESPGFVIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRV 330
             +NK+G RS+ T  L+F+         +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRSSDTHSLQFNQVKVHEENRIGEEGFGFTLAMKTLSGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A++YA++R   G  +     +   +A +   I AA  L ++ A   D+  +     
Sbjct: 257 AYELALNYAKQRETFGKPISQHQAIAFKLAQMHTKIEAARHLVYKAAWEKDQGLNYDLSG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A  V  EA++  GG+G+++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASEVAMEVSVEAVQVFGGNGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            + +   + K
Sbjct: 370 QMVISRAILK 379


>gi|182416689|ref|ZP_02624648.2| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237667272|ref|ZP_04527256.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           E4 str. BoNT E BL5262]
 gi|182379480|gb|EDT76972.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           5521]
 gi|237655620|gb|EEP53176.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum
           E4 str. BoNT E BL5262]
          Length = 380

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 129/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          I+            
Sbjct: 26  PIAKEIDETMRFPE--ENVAKMAEMGLLGIPFPEEYGGAGMDTLSYIQCVEELSKCCGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A+ +    T      +   + S E                   LTE   
Sbjct: 84  GVIVSAHTSLCATPIYTYGTEEQKNKYLKPLASGE-------------KLGAFALTEPVA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASMQKTIAVLEGDH-YVLNGSKIFITNAGYADTYIVFAMTDKSKGTKGISAFIIEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G      + K+G R+++T EL F N         N+         I +  LD   + +
Sbjct: 190 FPGFSVGSHELKMGIRASSTCELFFDNCIVP---KENLLGEEGRGFNIAMATLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E + Y + R   G  +      +  +A +  +  AA  L ++ A + 
Sbjct: 247 AAQALGIAEGAIDETVKYVKERVQFGRPISKFQNTQFELAKMRANTEAAKLLVYQAACAK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +  +        +A + K      A  V    ++  GG GY  +  I R  R++   
Sbjct: 307 DDHERFT-------HLAAMAKLVSANNASDVTRRCLQLFGGYGYTSDYPIERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+    ++ +   +
Sbjct: 360 EIYEGTSEVQMMVISGWM 377


>gi|309776307|ref|ZP_07671295.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915903|gb|EFP61655.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 379

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 144/396 (36%), Gaps = 40/396 (10%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ- 131
            A  A      L          D+ E  P     + +     +    + R +        
Sbjct: 16  FAEFAEKEVKPL------AAEVDEEERFP--RENVEKMKACKMMGIPFSREYGGAGADYL 67

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           ++ +    L          L + +      +    T      + P + +           
Sbjct: 68  SYILAVEELSKKCGTTGVVLSAHTSLGTWPIEHFGTEEQKNKYLPDLCTG---------- 117

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
                    GLTE   GTD A   +   K  DG Y L+G K F+++   +D +++ A  +
Sbjct: 118 ---KKLAAFGLTEPNAGTDAAGQQTTAVKDGDG-YILNGTKIFITNAGEADVYVIFAMTD 173

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G   +   + +    G    + + K+G R +AT EL F+N     LG  ++     +
Sbjct: 174 KTKGTHGISAFIVEKGMPGFTVGQHEKKLGIRGSATSELIFNNVR---LGKEHLLGQEGK 230

Query: 311 DMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI ++ LD   + ++   + +A     E + Y + R   G  +      +  +AD+ +
Sbjct: 231 GFKIAMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLADMQV 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
              AA  L +  A   ++    S EAA A       K +  ++A  V  +A++ +GG GY
Sbjct: 291 KTDAARWLVYDAAMKKEKGLPYSVEAAKA-------KLFAAEVAMEVTTKAIQLMGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + R +R++    I  G+     + +   + K
Sbjct: 344 TRDYPVERMFRDAKITEIYEGTSEVQRMVISGAMLK 379


>gi|315925640|ref|ZP_07921850.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621181|gb|EFV01152.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 639

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++R+   +G     +D  +        ++ I    L  +       L + +      +A
Sbjct: 40  EIVRKMGENGWMGIPYDAKYGGAGLDVISYAIAVEELSRVDGGTGVILSAHTSLGTYPIA 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P +                      GLTE   G+D     +      D
Sbjct: 100 AFGSQAQKEKYLPDLL-------------NGKKLGAFGLTEPNAGSDAGGTETTAVDKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 G  +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS
Sbjct: 147 HYLLNGGKVFITNAPKADTYVVFAVTTPDIGTHGISAFIVEKGWAGFDFGDHYDKLGIRS 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++T EL F+N         N+     +  KI ++ LD   + ++   + +A+     A+ 
Sbjct: 207 SSTAELIFNNVKVP---KENLLGQEGDGFKIAMMTLDGGRIGIASQALGIAQGAYEAALA 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YAR R   G  +  Q  +   IAD+A  +  A  L +  A      +  S EAA A+   
Sbjct: 264 YARERVQFGKPIGFQQSISFKIADMATKLRMARFLVYSAAELKTHHEPYSVEAAMAKG-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +   MA  V+ +A++  GG+GY++   I R YR++   +I  G+   M + + + 
Sbjct: 322 -----YASDMALEVVNDALQIFGGTGYLKGMDIERMYRDAKITTIYEGTNEIMRVVISSK 376

Query: 458 L 458
           L
Sbjct: 377 L 377


>gi|20162439|gb|AAM14583.1|AF494018_2 butyryl-CoA dehydrogenase [Clostridium beijerinckii]
          Length = 379

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 141/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +     +    + + F        ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVEKMAKLKMMGIPFSKEFGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    T      + P + S                    GLTE   
Sbjct: 84  GVILSAHTSLCASVINENGTNEQRAKYLPDLCSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTAVLEGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIM 323
             G    +L+NK+G R+++T EL   N        L     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLENKMGIRASSTTELVMENCIVPKENLLSKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA++Y + R   G  L     ++  IA++ + I AA  L +  A      
Sbjct: 250 ALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKYLVYLAATKKQAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 EPYSVDAARA-------KLFAADVAMEVTTKAVQIFGGYGYTKEYPVERMMRDAKICEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|86131523|ref|ZP_01050121.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817968|gb|EAQ39136.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 380

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 143/393 (36%), Gaps = 27/393 (6%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ- 131
           + R A  +  +        ER D ++  PA   L+++    G    + D  +        
Sbjct: 11  MIRDAARDFARTELLDGVIER-DNIQQFPA--ELVKKMGDLGFMGIMVDPKYGGSGMDAI 67

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           ++ +    L  +    +  +   +      +    +    + +  K+ + E         
Sbjct: 68  SYVLIMEELSKIDASASVIVSVNNSLVCYGLETYGSEEQKQKYLTKLATGEM-------- 119

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                     L+E   G+D  +  +      D         W  +   SD ++++AQ + 
Sbjct: 120 -----VGAFCLSEPEAGSDATSQATTAIDKGDHYVLNGTKNWITNGGRSDVYLVIAQTDR 174

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVE 310
             G   +   + +    G      ++K+G R + T  L+F++        +     G   
Sbjct: 175 EKGHRGINAFIVEKGMEGFEVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKF 234

Query: 311 DMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++     +   A+ Y++ R   G  + +   +   +AD+ ++I A
Sbjct: 235 AMKTLSGGRIGIAAQALGIASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYVEIEA 294

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  + A   D+  +  + +A A       K +  K+A     EA++  GG+G+++E 
Sbjct: 295 ARHLVMKAAWDKDQGNNYDQSSAMA-------KLYASKVAMEQTVEAVQIHGGNGFVKEY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            + R  R++    I  G+     + +   L KG
Sbjct: 348 HVERLMRDAKITQIYEGTSEIQKIVISRSLIKG 380


>gi|91978083|ref|YP_570742.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684539|gb|ABE40841.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 618

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 142/547 (25%), Positives = 231/547 (42%), Gaps = 29/547 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFPS----VVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N Y +D  L  L+  + P      +   L+ LG    S    E AR A+ +TP
Sbjct: 46  APDTTGLNFYRADPSLADLLRIHLPDALVRHIEPHLDRLGGLAGS-VLDEYARAADRHTP 104

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     VE+HPA+  L   +    G+H     +             + A   
Sbjct: 105 ILHQRDRFGRDAQYVEYHPAYRELENAAFGAFGIHALSHRQGIMGWPDVYPVTAKHAFTL 164

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  + E G     +VT   A +++      +   +   +   +                G
Sbjct: 165 LFNEAEFGMGCPINVTDGCAKLLSKFGDDALKAKYLDGLTQTDM---------ARLTQGG 215

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +T+   +  D  + L+G KWF S+  +   ++LA+ EG       V
Sbjct: 216 QFMTEKEGGSDVGTLTTVATRDGDH-WRLTGEKWFCSNADAKIVMLLARPEGAGRGTRGV 274

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+PR L+DGSPN     RLK+K+G RS A+ E++      + +G L+     + +M 
Sbjct: 275 GLFLMPRFLDDGSPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGRLDRGFVQMAEMV 334

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +AI  A+ R V G  ++D P+ +R +  I L      ++S
Sbjct: 335 NSSRLSNGVKSTALMRRAWHDAITVAKHRVVFGQRIVDLPLARRQLMKILLPTEQGMSIS 394

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A++ S++ AA  RI+ P  K+   + A     +A+E  GG GY+EE + AR
Sbjct: 395 FLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKACGDALEMRGGIGYVEEFATAR 454

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++   SI  G+GN + LD L            L + L   L  + +           
Sbjct: 455 LLRDAHLGSIWEGTGNIVALDALKRAIGRHGAESALGADLHARLDDASRVPQHWRDKLHG 514

Query: 493 LCKEDKGLARFL---TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
           L     G AR +    E  A A  A +      + +A  +   R          +L  R 
Sbjct: 515 LIDRAIGYAREVASCAEYEADARRATSSLYHVASAVALAWEGARIEAMRGDARRVLLSRL 574

Query: 550 NAAHIID 556
              H ++
Sbjct: 575 VIDHRLN 581


>gi|167769780|ref|ZP_02441833.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM
           17241]
 gi|167668141|gb|EDS12271.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM
           17241]
          Length = 664

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 139/362 (38%), Gaps = 32/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
             ++     GL    + + +            A           G ++S  V+     + 
Sbjct: 68  EQIKHFGEMGLMGIPYPKEYGGAGLDALSYAIAVEELSRVDGGTGVILSAHVSLGSWPIF 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P+ +       GLTE+  G+D     +      D
Sbjct: 128 AFGTEEQKQKYL-------------VPLARGEKLGSFGLTEQNAGSDAGGTETTAVLKGD 174

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++ P SD +++ A     +G   +   + +    G  +    +K+G R
Sbjct: 175 -YYLLNGSKIFITNAPKSDIYVVFAVTTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIR 233

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           S++T EL F++         N+     E  KI +  LD   + ++   + +A+     A+
Sbjct: 234 SSSTAELIFNDVKVP---KENLLGKEGEGFKIAMATLDGGRIGIAAQALGIAQGAFEHAV 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   IAD+A  +  A  L +  A   +       E+A A++ 
Sbjct: 291 EYAKERIQFGKPIAFQQALSFKIADMATKLRCARMLIYSSAELKEHHVPYGMESAMAKM- 349

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +   +A  V  +A++  GGSGY++   + R YR++   +I  G+     + + +
Sbjct: 350 ------YASDIALEVTNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGTNEIQRVVIAS 403

Query: 457 LL 458
            L
Sbjct: 404 HL 405


>gi|167766343|ref|ZP_02438396.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1]
 gi|317496770|ref|ZP_07955100.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167711934|gb|EDS22513.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1]
 gi|291559253|emb|CBL38053.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SSC/2]
 gi|316895782|gb|EFV17934.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 383

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 132/383 (34%), Gaps = 36/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       + +         + +    L  +    
Sbjct: 26  PLAQDVDENEQFPV--ETVAKMAKAGFLGIPVPKEYGGQGCDPLTYVMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCIDPIQTFGTEEQKKKYIPDLASG-------------KKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLE 263
           GTD     ++     D         +  +   +D +I++A      +       +   + 
Sbjct: 131 GTDAQGQQTKAVLDGDEWVLNGSKCFITNGSYADVYIVIAVTGVVEKRGRKMKEISAFIV 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G  +   + K+G R +AT EL F +     +   N+     +   I ++ LD   
Sbjct: 191 EKGTPGFTFGTKEKKMGIRGSATYELIFEDCR---IPKENLLGKQGKGFGIAMHTLDGGR 247

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + LAE      I Y + R   G  +      +  +AD+A  + AA  L ++ A
Sbjct: 248 IGIASQALGLAEGALERTIEYVKERKQFGRSIGQFQNTQFQLADMATKVEAAKQLVYKAA 307

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +    K  S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R++
Sbjct: 308 MAKATQKVYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMRDA 360

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     + +   L K
Sbjct: 361 KITEIYEGTSEVQRMVISGNLLK 383


>gi|299537950|ref|ZP_07051236.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298726532|gb|EFI67121.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 378

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 140/379 (36%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   R +  EF      LL++    GL                 ++ I    L  ++ + 
Sbjct: 26  PWVARMEAGEFP---RELLQQMGELGLMGITTPEDLGGSGMDFTSYIIAINELSKVSAVM 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +         K + PK+ + EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPIIYFGNDEQKKRYVPKLATGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ S+  +  D         +  +   +D +I+ A          +   + +   
Sbjct: 130 GSDAGSLQSKAVRDGDDYVINGSKVFITNGGEADVYIVFASTNPAEKTKGISAFIVEKGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G   + TV+L F N     +   N+     E  KI +  LD   + ++
Sbjct: 190 PGLIIGKDEHKMGLHGSRTVQLTFDNCR---ISADNLLGEEGEGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AEA       YA+ R   G  +  Q  +   +AD+A  + +A  L +R A+   
Sbjct: 247 AQALGIAEAALEASTAYAKERIQFGKPIAAQQGVGFKLADMATAVESAKLLVYRAADLRA 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  S   EA+ A       K +  + A     EA++  GG GY E+  + R++R++    
Sbjct: 307 KGLSCGAEASMA-------KLFSSRTAVQTAIEAVQIFGGYGYTEDYPVERYFRDAKVTE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 360 IYEGTSEIQRLVISKHLLK 378


>gi|254517613|ref|ZP_05129669.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226911362|gb|EEH96563.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 379

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 78/373 (20%), Positives = 138/373 (36%), Gaps = 28/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G+    + + +          I A      A    
Sbjct: 26  PIAAEIDETERFPM--ENVEKMAKLGMLGIPFAKEYGGAGGDTLSYIIAVEELSKACGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  AS++    T    + +   + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCASLIEQFGTKEQKEKYLVDLASG-------------KKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  ++D FI+ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTVAVLDGDN-YILNGSKIFITNGGVADTFIIFAMTDRSKGTRGISAFIVEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + + K+G R+++T EL  SN        +     G    MK L    +  A  
Sbjct: 190 FEGFSIGKKEEKLGIRASSTTELVMSNCIVPKENLIGQEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA+ Y + R   G  L     ++  IA++   I AA  L ++ A   D  
Sbjct: 250 ALGIAEGAFEEAVAYMKERKQFGKPLAAFQGLQWMIAEMDTKIEAARHLVYKAAWLKDNK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S +AA A       K +  ++A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 LPYSVDAARA-------KLYAAEVAMDVTTKAVQIFGGYGYTKEYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLN 456
            G+     + +  
Sbjct: 363 EGTSEVQKMVISG 375


>gi|87120053|ref|ZP_01075949.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86164755|gb|EAQ66024.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 384

 Score =  296 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+  F P    ++R++   G        S   +   +           M     
Sbjct: 26  PNAAKWDEESFFPV--DVIRKAGEMGFASLYSPESVGGLGLSRLDSSIIFERLSMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++       MV     P V + +A  + S                     LTE   G
Sbjct: 84  TAYLTIHNMVTWMVTSFAKPSVLEKYAESLIS-------------AQALGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S   S D  +++A+  G  G   V  ++ D   
Sbjct: 131 SDAASLKTTAKKEGDH-YILNGSKVFISGAGSTDVLVVMART-GGPGARGVSAIVVDAHS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
           +G+ Y R ++K+G  S  T  + F N    +   L     G V  MK L    ++ A  S
Sbjct: 189 DGISYGRKEDKMGWNSQPTRMISFDNVKVPVENLLSEEGEGFVLAMKGLDGGRINIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L +A  Y + R   G  + D   ++  +AD+A ++ AA  L    A+  D   
Sbjct: 249 LGTAQQALNQARDYMQERKQFGKQIGDFQGLQFRLADMATELLAARQLVRLAASKLDLGH 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +   +   V  EA++  GG GYI+E  + R+ R++  + IL 
Sbjct: 309 KD------ATTYCAMAKRFATDVGFKVCDEALQIFGGYGYIKEYPMERYVRDTRVHRILE 362

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M + +   L   T+
Sbjct: 363 GTNEIMRVIIGRRLLADTD 381


>gi|255528046|ref|ZP_05394881.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296188158|ref|ZP_06856550.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255508260|gb|EET84665.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296047284|gb|EFG86726.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 378

 Score =  296 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 145/379 (38%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     + +     +    +   F    + +                 
Sbjct: 26  PIAAEIDETGEFP--RENINKMAKLNMLGMPFPVEFGGAGQNEYVFAMCIEEIAKKCAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++       ++    T    + +               P+ K        LTE   G
Sbjct: 84  AAILAVHNIPCWILTNYGTDAQKEKYL-------------RPLLKGEKIGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD A+  S+     D  Y L+G K F+++   +  +I+LA  +   G   +   + + + 
Sbjct: 131 TDSASQNSKAVLKGD-SYILNGQKCFITNGGEAGIYIILAMTDKTKGTKGISAFIVEENF 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    + +NK+G R++AT EL F +    ++   N+     +  KI +  LD   ++++
Sbjct: 190 KGFSIGKKENKMGIRASATSELIFKDC---IIPKENLLGKEGQGFKIAMQALDGGRIAMA 246

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A     E + Y ++R   G  L     ++  +AD+   I A+  L +  AN  D
Sbjct: 247 AQAVGIAQGAMDETVEYLKQREQFGKPLAAFQGLQWNLADMETRINASRLLVYDAANKLD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ ++EA+ A       K +  + A  V  +A++  GG GY+++  I R  R++    
Sbjct: 307 NGKTITKEASMA-------KLFAAETAMYVTTKAVQLHGGYGYMKDYPIERMMRDAKITE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           +  G+     + +   L K
Sbjct: 360 LYEGTSEVQRMVISRSLLK 378


>gi|881606|gb|AAB09615.1| similar to product encoded by Bacillus subtilis short chain
           acyl-CoA dehydrogenase gene, GenBank Accession Number
           Z49782
          Length = 379

 Score =  296 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 132/364 (36%), Gaps = 26/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 37  FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + P + S ++                  LTE   G+D  ++ +   K  
Sbjct: 97  MYFGNEEQKMKYIPNLASGDH-------------LGAFALTEPHSGSDAGSLRTTAIKK- 142

Query: 223 DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G Y L+G K F+++  + D +I  A  +   G   +   + + +  G    + + K+G 
Sbjct: 143 NGKYLLNGSKIFITNGGAADIYITFALTDPDQGRHGISAFIVEKNTPGFTVGKKERKLGL 202

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T EL F N        L     G    M  L    +  A  ++     +L  A+ Y
Sbjct: 203 YGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  +     +   +AD+A    AA  L +  A+  +   +  +EA+ A+    
Sbjct: 263 AKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQ--- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +    A     +A++  GG GY+++  + R  R++    I  G+     L +   L
Sbjct: 320 ----FASDAAVKAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYL 375

Query: 459 EKGT 462
             GT
Sbjct: 376 LGGT 379


>gi|118444538|ref|YP_878944.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(butyryl-CoA
           dehydrogenase) [Clostridium novyi NT]
 gi|118134994|gb|ABK62038.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(Butyryl-CoA
           dehydrogenase) [Clostridium novyi NT]
          Length = 379

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+    + + +  V       I A           
Sbjct: 26  PMAAEIDETEAFPM--ENVKKMAKYGMFGIPFAKEYGGVGGDYLSYILAVEELAKKCGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  V+  AS++    T    K + P + S                    GLTE   
Sbjct: 84  SIILSAHVSLCASVIDAFGTEEQKKKYLPDLCSG-------------KKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++  ++D FI  A  +   G   +   + +  
Sbjct: 131 GTDASGQQTVAVKQGD-KYILNGQKIFITNGGVADVFIAFAMTDKSKGTKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R+++T EL F +        +     G    MK L    +  +  
Sbjct: 190 FKGFSIGKVEDKLGIRASSTTELIFEDCEVPAENLIGKEGKGFAIAMKTLDGGRIGVSAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EAI Y + R   G  L     M    A+    I AA  L ++ A +    
Sbjct: 250 ALGIAEGALEEAIEYMKERKQFGKQLYKFQGMGWMAAECKAKIEAARYLVYKAAYNKMTG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  + EAA A       K +    A  V  +A++  GG GY ++  + R +R++    I 
Sbjct: 310 KPYTVEAATA-------KLFAADTAMEVATKAVQMFGGYGYTKDYPVERMFRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L +
Sbjct: 363 EGTSQVQKMVISGALFR 379


>gi|328554147|gb|AEB24639.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens
           TA208]
          Length = 377

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 138/364 (37%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L+++    GL       ++        ++ +    +  ++      L   +    + + 
Sbjct: 38  RLIKKMGEAGLMGIPVPEAYGGAGADITSYILAIHEISKVSAAVGVILSVHTSVGTNPIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                  LTE + G+D   + +   +   
Sbjct: 98  HFGTEAQKQMYIPKLAAGEY-------------VGAFALTEPQSGSDAGGLKTTAVRKG- 143

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F+++  + D ++  A  +   G   +   + + +  G    + + K+G  
Sbjct: 144 GSYILNGSKIFITNGGAADLYLTFALTDPAKGRKGISAFIVEKNTPGFSIGKKEKKLGLL 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----I 336
            ++TVEL+F       +   N      E   I +  LD   + ++   + + EA     +
Sbjct: 204 GSSTVELQFDQA---EIPIENRLGEEGEGFSIAMKNLDVGRIGIAAQALGIIEAALGCSV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y++ R   G  +     +   ++D+A +  AA  L +  A+ +       +EA+ A+  
Sbjct: 261 EYSKTRSQFGRPIASNQAVSFKLSDMATNAEAAKLLVYHAADLYQRGLPCGKEASMAKQ- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +    A     EA++  GG GY++E    R +R++    I  G+     L +  
Sbjct: 320 ------FASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISK 373

Query: 457 LLEK 460
            L +
Sbjct: 374 YLLQ 377


>gi|118480376|ref|YP_897527.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196045417|ref|ZP_03112648.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|229187568|ref|ZP_04314708.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|118419601|gb|ABK88020.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|196023624|gb|EDX62300.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|228595935|gb|EEK53615.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 381

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 133/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTVEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 NYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|157364682|ref|YP_001471449.1| acyl-CoA dehydrogenase domain-containing protein [Thermotoga
           lettingae TMO]
 gi|157315286|gb|ABV34385.1| acyl-CoA dehydrogenase domain protein [Thermotoga lettingae TMO]
          Length = 379

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 135/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+ E  P     +++    G+    + +            I        A    
Sbjct: 26  PLAAKIDEEEIFPL--ETIKKMAKLGMLGIPFPKEAGGSGGDYITYILLVEELAKACAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +     +      +  + +               P+ + +      LTE   
Sbjct: 84  SIIVSAHTSLCCWPIFTYGNQKQKEKYL-------------RPLLQGTKIGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD A+  +  +   +         +  ++  +D FI+ A  +       +   + +   
Sbjct: 131 GTDAASQQTTARLQDNHYVLNGSKVFITNAAHADVFIVFAMTDRSKATKGISAFIVERGF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           +G    ++++K+G R ++T EL F N         N+        KI +  LD   + V+
Sbjct: 191 DGFRIGKIEHKMGIRGSSTAELVFDNCKVPRD---NLLGEEGMGFKIAMSTLDGGRIGVA 247

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     E + Y + R   G  L     ++  IA++A  I AA  L ++ A    
Sbjct: 248 AQALGIAEGAFNECVKYMKDRKQFGKTLSSFQGLQWYIAEMATQIEAARNLVYKAAWKKQ 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S + +AA A       K +  +++  V    ++  GG GY ++  + R  R++    
Sbjct: 308 NNLSHAVDAAMA-------KLFASEISMKVTTTVVQIFGGYGYTKDYPVERMMRDAKITQ 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + + + + K
Sbjct: 361 IYEGTSEVQKMIIASHVLK 379


>gi|308174203|ref|YP_003920908.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|307607067|emb|CBI43438.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|328912538|gb|AEB64134.1| short chain acyl-CoA dehydrogenase [Bacillus amyloliquefaciens LL3]
          Length = 377

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 138/364 (37%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L+++    GL       ++        ++ +    +  ++      L   +    + + 
Sbjct: 38  RLIKKMGEAGLMGIPVPEAYGGAGADITSYILAIHEISKVSAAVGVILSVHTSVGTNPIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                  LTE + G+D   + +   +   
Sbjct: 98  HFGTEAQKQMYIPKLAAGEY-------------VGAFALTEPQSGSDAGGLKTTAVRKG- 143

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F+++  + D ++  A  +   G   +   + + +  G    + + K+G  
Sbjct: 144 GSYILNGSKIFITNGGAADLYLTFALTDPAKGRKGISAFIVEKNTPGFSIGKKEKKLGLL 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----I 336
            ++TVEL+F       +   N      E   I +  LD   + ++   + + EA     +
Sbjct: 204 GSSTVELQFDQA---EIPIENRLGEEGEGFSIAMKNLDVGRIGIAAQALGIIEAALGCSV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y++ R   G  +     +   ++D+A +  AA  L +  A+ +       +EA+ A+  
Sbjct: 261 EYSKTRSQFGRPIASNQAVSFKLSDMATNAEAAKLLVYHAADLYQRGLPCGKEASMAKQ- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +    A     EA++  GG GY++E    R +R++    I  G+     L +  
Sbjct: 320 ------FASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISK 373

Query: 457 LLEK 460
            L +
Sbjct: 374 YLLQ 377


>gi|309357473|emb|CAP35829.2| hypothetical protein CBG_18356 [Caenorhabditis briggsae AF16]
          Length = 616

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 124/539 (23%), Positives = 219/539 (40%), Gaps = 49/539 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANY 79
            NQ    +  N Y  D +L  ++    S      V ++L   G+ + S    +L R A  
Sbjct: 36  FNQDAPTL-HNPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITS-EIDQLGRQAEL 93

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L      G+R DK+     W  L +    +G+    ++   +P VR+     + A+
Sbjct: 94  EQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR---IHQVAK 150

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L+L +          ++T  ++  L +       +     + E     ++     +   G
Sbjct: 151 LFLFSPSAGLVSCPMAMTDGAVKTLTS----LNLYGKHELATETVDRLRSRDPTKAWTSG 206

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRV-- 253
             +TEK+GG+D+A    +   +I    Y L G+KWF S+  +D  + LA+V   +G    
Sbjct: 207 QWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDSDGNAVE 266

Query: 254 GCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G   +   L     + G+ NG+   RLKNK+G +   T EL         +G+       
Sbjct: 267 GSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQGRGVAG 326

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +  + +A+ S+  MR  ++ A  Y+ +R V G      P+    IA + ++   
Sbjct: 327 ISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKLEIETRG 386

Query: 369 ATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  L F  A      +  KS   EA   R++ P+ K +  K A  +++E +EC GG GY+
Sbjct: 387 SMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECFGGQGYM 446

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS------- 478
           E+  +    R++    I  G+ N + LDVL +     N+       +EQ L +       
Sbjct: 447 EDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANTKSGDSK 506

Query: 479 ---SGKKVITILRDSISLC-----------KEDKGLARFLTEKIALASSAAALYRAGMN 523
              S + V   L++   L                 +AR +   IA   S A L     +
Sbjct: 507 LQKSKEAVEVALKELQKLLVKASDSNIQGETRIDTVARHIAFAIARIYSGALLIDHASD 565


>gi|229076556|ref|ZP_04209516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|229099775|ref|ZP_04230700.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|229118837|ref|ZP_04248186.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228664638|gb|EEL20131.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228683664|gb|EEL37617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228706589|gb|EEL58802.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 381

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 132/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L++    GL        +        ++ +    +  ++      L   +    + + 
Sbjct: 44  EILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  K+ + EY                  LTE   G+D  ++ S+  K  D
Sbjct: 104 YFGTEEQKQKYVSKLAAGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKGD 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +  +I+ A      G   +   + +    GL   + ++K+G   
Sbjct: 151 NYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLLG 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI 
Sbjct: 211 SRTVQLTFEDMIVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAID 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       A
Sbjct: 268 YAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE-------A 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +   
Sbjct: 321 SIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRA 380

Query: 458 L 458
           L
Sbjct: 381 L 381


>gi|229014511|ref|ZP_04171629.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229136161|ref|ZP_04264914.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228647320|gb|EEL03402.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228746861|gb|EEL96746.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 376

 Score =  296 bits (757), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKD 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + A+  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGLGFKLADMATSVEASRLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|42524329|ref|NP_969709.1| acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39576538|emb|CAE80702.1| probable acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 505

 Score =  296 bits (757), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/512 (23%), Positives = 215/512 (41%), Gaps = 43/512 (8%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N + SD  L  ++ +             LE LGE  ++      A+ A    P    + P
Sbjct: 13  NTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTD-MLTWAQEAESQPPVHVPFDP 71

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D ++    W AL + +  +G+  + +DR F    R      + A LYL +   A 
Sbjct: 72  WGRRIDDIKTSHGWKALEKVAAEEGIVATAYDRRFGAASR----VYQMALLYLYSPSSAI 127

Query: 150 HLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +  +A  + L     +     P + SR+          KT    G  +TE+ G
Sbjct: 128 FSCPLAMTDGAARALELYADADLKARVLPHLLSRD---------PKTFWTAGQWMTERTG 178

Query: 208 GTDIAAITSQGQK-----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCF 256
           G+D++  ++              + L G KWF S+  S   + LA+ +G       +  F
Sbjct: 179 GSDVSGTSTDAHPFTGTSEFGATHSLHGTKWFTSATTSQMALTLARPDGAAPGSRGLSLF 238

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +    + G  N +   RLK+K+G ++  T EL    T   ++G +      +  +  + 
Sbjct: 239 FLELRNDKGELNHIQIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVKRIASVLNIT 298

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++I +V  +R +L  A  Y+ +R   G +L D P+ K  +  +  D     A SF +
Sbjct: 299 RIYNSICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFRKCIAFSFFV 358

Query: 377 ANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           AN   +    ++ + E    R++ PI K +  K +  + +E +E  GG+GY+E+  I R 
Sbjct: 359 ANLLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVEMFGGAGYVEDTGIPRL 418

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++   SI  G+ N + LD+L   EK     + EQ        L  +G + +  L+  +
Sbjct: 419 LRDAQVFSIWEGTTNVLSLDMLRAFEKDQAGQILEQFL-----VLNEAGSEELVRLQKLL 473

Query: 492 SLCKEDKGL-ARFLTEKIALASSAAALYRAGM 522
           +L  E K   AR +   I  A +  A+ +  +
Sbjct: 474 TLSGEQKEQHAREIAFLIGNAVARIAMKKYSL 505


>gi|268574760|ref|XP_002642359.1| Hypothetical protein CBG18356 [Caenorhabditis briggsae]
          Length = 615

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 124/539 (23%), Positives = 219/539 (40%), Gaps = 49/539 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANY 79
            NQ    +  N Y  D +L  ++    S      V ++L   G+ + S    +L R A  
Sbjct: 36  FNQDAPTL-HNPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITS-EIDQLGRQAEL 93

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
             P+L      G+R DK+     W  L +    +G+    ++   +P VR+     + A+
Sbjct: 94  EQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR---IHQVAK 150

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L+L +          ++T  ++  L +       +     + E     ++     +   G
Sbjct: 151 LFLFSPSAGLVSCPMAMTDGAVKTLTS----LNLYGKHELATETVDRLRSRDPTKAWTSG 206

Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRV-- 253
             +TEK+GG+D+A    +   +I    Y L G+KWF S+  +D  + LA+V   +G    
Sbjct: 207 QWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDSDGNAVE 266

Query: 254 GCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           G   +   L     + G+ NG+   RLKNK+G +   T EL         +G+       
Sbjct: 267 GSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQGRGVAG 326

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + +M  +  + +A+ S+  MR  ++ A  Y+ +R V G      P+    IA + ++   
Sbjct: 327 ISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKLEIETRG 386

Query: 369 ATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  L F  A      +  KS   EA   R++ P+ K +  K A  +++E +EC GG GY+
Sbjct: 387 SMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECFGGQGYM 446

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS------- 478
           E+  +    R++    I  G+ N + LDVL +     N+       +EQ L +       
Sbjct: 447 EDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANTKSGDSK 506

Query: 479 ---SGKKVITILRDSISLC-----------KEDKGLARFLTEKIALASSAAALYRAGMN 523
              S + V   L++   L                 +AR +   IA   S A L     +
Sbjct: 507 LQKSKEAVEVALKELQKLLVKASDSNIQGETRIDTVARHIAFAIARIYSGALLIDHASD 565


>gi|161523758|ref|YP_001578770.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189351481|ref|YP_001947109.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|221200078|ref|ZP_03573121.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221206769|ref|ZP_03579781.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221211260|ref|ZP_03584239.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|160341187|gb|ABX14273.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189335503|dbj|BAG44573.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|221168621|gb|EEE01089.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221173424|gb|EEE05859.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221180317|gb|EEE12721.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 595

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 100/489 (20%), Positives = 181/489 (37%), Gaps = 69/489 (14%)

Query: 55  HKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERW--DKVEFHP-AWHALLRRS 110
           H +L+      ++   +E  +  A    P        G ++  D V   P  +    R+ 
Sbjct: 31  HADLD---ADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYVGDGVVTTPTGFKEAYRQY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPR 169
           +  G      D  +       A    A    L +  +A  +       A   +    +P 
Sbjct: 88  VEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGSPE 146

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++
Sbjct: 147 LQKAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYSIT 193

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+   
Sbjct: 194 GTKIFISSGEHDMASNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIKCG 253

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V+  
Sbjct: 254 SIEHKMGIHGNATCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQ 313

Query: 334 EAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            ++ YA+ R                  +I  P ++R +         A A ++  A   D
Sbjct: 314 NSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQID 373

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++ R
Sbjct: 374 KELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQYVR 433

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           ++  N I  G+ +   LD+L     G             D+G+  KK   I+ D +    
Sbjct: 434 DARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKIVSDFVEAEG 480

Query: 496 EDKGLARFL 504
               +A F+
Sbjct: 481 VKPEMAEFV 489


>gi|187933914|ref|YP_001884609.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187722067|gb|ACD23288.1| butyryl-CoA dehydrogenase [Clostridium botulinum B str. Eklund 17B]
          Length = 379

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 144/377 (38%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+    + + F        ++ +    L  +    
Sbjct: 26  PIAAEVDETERFPM--ENVEKMGKIGMMGIPFAKEFGGAGGDVLSYIMTVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    TP     + P++                      GLTE   
Sbjct: 84  GVIVSAHTSLCASVINEHGTPDQKAKYLPELCQG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTAILDGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +L++K+G R ++T EL   +        +     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA++Y + R      L  Q  ++  IA++ + I AA  L ++ A      
Sbjct: 250 ALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAARHLVYKAACKKQNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +  ++A  V  +A++  GG GY ++  + R  R++    I 
Sbjct: 310 QPYSVDAARA-------KLFAAEVAMDVTTKAVQIFGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|218781613|ref|YP_002432931.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762997|gb|ACL05463.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 379

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 136/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  PA    L+     GL   +    +E         + A      A    
Sbjct: 26  PTAAERDRTKEFPA--ENLKEMAELGLLGMMVPPEYEGAGADAVSYVLALSEVAYACAST 83

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS         +  + T    + + P +   E                   +TE   
Sbjct: 84  AVIMSVHNSIVCDSILHLGTDEQKQRYLPALAMGEM-------------IGAFAMTEPLA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +   +  D        ++  S   +   I+ A+ +       +   L D   
Sbjct: 131 GSDPLRQETTAVQDGDHYIINGVKRFITSGQNAGVVIVTAKTDPSKRHRGITAFLVDKGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G    RL++K+G R++ T +L F +        L     G    MK L    +  A  S
Sbjct: 191 PGFSVGRLEDKMGLRASDTADLYFEDCRVPASQILGGEGGGFSLAMKALDGGRIGIAAQS 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L  A+ YA+ R   G  +     +   +ADIA +I AA  ++   A+  D  +
Sbjct: 251 IGVAQACLDAAVKYAKEREQFGKPIGQFQGVSGPLADIATEIHAARLMALDAASRKDRGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EA+ A       K +  +M   V A+A++  GG GY ++  + R+YR++   +I  
Sbjct: 311 NFTMEASMA-------KLFASEMVNRVTAKALQIHGGYGYTKDYPVERYYRDARVFTIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 364 GTSEIQRIVISRHLLK 379


>gi|187934849|ref|YP_001885563.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187723002|gb|ACD24223.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
          Length = 379

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 134/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    GL    +   +          ++            
Sbjct: 26  PIAKEIDESMRFPE--ENVAKMAEMGLLGIPFSEEYGGAGMDTLSYVQCVEELSKCCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A+ +    T      +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLCATPIHTFGTEEQKVKYLKPLASGE-------------KLGAFGLTEPVA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++   +D +I+ A  +   G   +   + +  
Sbjct: 131 GTDASMQKTTAVLEGDH-YVLNGSKIFITNAGYADIYIVFAMTDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G R+++T EL F N       LLG+     G          +  A  
Sbjct: 190 FQGFSVGTHELKMGIRASSTCELFFDNCIVPKENLLGEEGKGFGIAMATLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ E + Y + R   G  +      +  +A +     AA  L ++ A + D+ 
Sbjct: 250 ALGIAEGAIEETVKYVKERVQFGKSISQFQNTQFELAQMRASTEAAKLLVYQAACAKDDH 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA A+++A        + A  V +  ++  GG GY  +  I R  R++    I 
Sbjct: 310 EKYTHLAAMAKLIA-------SRNATNVTSRCLQLFGGYGYSSDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+    ++ +   + +
Sbjct: 363 EGTSEVQMMVISGWMLR 379


>gi|255994680|ref|ZP_05427815.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989]
 gi|255993393|gb|EEU03482.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989]
          Length = 380

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 125/372 (33%), Gaps = 30/372 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     + +    GL    +   +                        
Sbjct: 26  PLAADIDQEHRFPE--ETVEKMAKYGLLGVPFPTKYGGAGGDSVSYAITVEELSKKCAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G + S   +     +           + P + S                    GLTE   
Sbjct: 84  GVICSAHTSLCCWPIFKWGNEDQKMKYLPDLLSG-------------KKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD A   ++ ++  D         +  +   +D F+++A  +   G   +   + +   
Sbjct: 131 GTDAAGQQTRAEQDGDFWVLNGAKVFITNGGYADVFVVMAMTDKSKGTKGITAFIVEKGD 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    + ++K+G  +++T EL F N        L       +    +  LD   + ++ 
Sbjct: 191 EGFSIGKTEDKMGICASSTTELIFQNCKIPKDRMLGGLGKGFK--VAMSTLDGGRIGIAS 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+      + Y + R   G  L     ++  +AD+A  I AA  L ++ A+  + 
Sbjct: 249 QALGIAQGALDVTVEYMKSRKQFGKKLSQMQALQFEVADLATRIEAARLLVYQAADMKER 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S+++A A       K +  + A  V  + ++  GG GY ++  + R  R++    I
Sbjct: 309 GLPYSKQSAMA-------KLFAAETAMHVTTKCVQLHGGYGYTKDYPVERMMRDAKITEI 361

Query: 443 LLGSGNAMVLDV 454
             G+     + +
Sbjct: 362 YEGTSEVQKIVI 373


>gi|313898664|ref|ZP_07832199.1| rubredoxin [Clostridium sp. HGF2]
 gi|312956548|gb|EFR38181.1| rubredoxin [Clostridium sp. HGF2]
          Length = 634

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 145/372 (38%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P+    + +    GL    + + +            A           G ++S 
Sbjct: 32  DKENEFPS--EAIAKFGKMGLMGIPYPKEYGGAGLDVISYAIAVEELSRVDGGTGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +   + S E                  GLTE   G+D A 
Sbjct: 90  HVSLGSYPIFAFGTEEQKQKYLVPLASGE-------------KIGAFGLTEVNAGSDAAG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++   +D +++ A     +G   +   + +   +G  +
Sbjct: 137 TETTAVLEGD-YYILNGGKIFITNADKADTYVVFASTNPEMGTRGISAFIVEKGWDGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS++T EL F++         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKMGIRSSSTAELIFNDVKVP---KENLLGKLGQGFKIAMATLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A+ YA+ R   G  +  Q V+   +AD+A  +  A  L +  A   +  +  
Sbjct: 253 IAQGAYENALEYAKERVQFGKPIAQQQVISFKLADMATKLRCARMLIYSSAELKENHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A+        +   +A  +  +A++  GGSGY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKQ-------YASDVALEICNDALQIFGGSGYLKGMEVERAYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + + + +
Sbjct: 366 NEIQRVVIASHI 377


>gi|228469380|ref|ZP_04054394.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis
           60-3]
 gi|228309064|gb|EEK17694.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis
           60-3]
          Length = 379

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 137/384 (35%), Gaps = 42/384 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+      + +              ++Y MA  E 
Sbjct: 26  PLAAEIDEQERFPI--ETVQKMSKLGIMGIPIPKEYGGSG-------STVQIYTMAVEEL 76

Query: 149 GHLMS--------PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             + +         +      +    T    + + PK+ S E+                 
Sbjct: 77  SRVCATTGVVVSAHTSLCCDPIMSFGTEEQKQHYLPKLASGEW-------------IGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
           GLTE   GTD +A  +      +  Y L+G+K F+++   +  +I+ A  +   G   + 
Sbjct: 124 GLTEPNAGTDASAQQTFAV-EEEECYILNGNKIFITNAEYAHVYIIFAMTDKSKGNKGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             + +    G    + + K+G R +AT EL   N       LLG +              
Sbjct: 183 AFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRIPKDRLLGKVGGGFKVAMHTLDGG 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  ++   R ++ E + Y + R   G  +      +  +AD+   I  A+ L  R 
Sbjct: 243 RIGIAAQALGIARGAMDETVKYTKERKQFGRSIAKFQNTQFQLADLKARIDCASLLVRRA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D   S + EAA         K +C + A  +  +A++  GG GY  E  + R  R+
Sbjct: 303 AWCKDNGLSYNLEAA-------EAKLFCAETAMDMTTKAVQFHGGYGYTREYPVERMMRD 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 356 AKITEIYEGTSEVQRMVIAAHLLK 379


>gi|229105934|ref|ZP_04236558.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228677508|gb|EEL31761.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 381

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 132/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L++    GL        +        ++ +    +  ++      L   +    + + 
Sbjct: 44  EILQKMGKLGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  K+ + EY                  LTE   G+D  ++ S+  K  D
Sbjct: 104 YFGTEEQKQKYVSKLAAGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKGD 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +  +I+ A      G   +   + +    GL   + ++K+G   
Sbjct: 151 NYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLLG 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI 
Sbjct: 211 SRTVQLTFEDMIVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAID 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       A
Sbjct: 268 YAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE-------A 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +   
Sbjct: 321 SIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRA 380

Query: 458 L 458
           L
Sbjct: 381 L 381


>gi|259415587|ref|ZP_05739508.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259348817|gb|EEW60579.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 577

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 139/547 (25%), Positives = 231/547 (42%), Gaps = 39/547 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+NA+ +D  L  L   +           EL+ +G    +   +ELA  A+ N P 
Sbjct: 10  PDSAGLNAFDADRALQDLAWLYLEKADYTRALPELQRMGSL--TQQLEELALTADKNPPT 67

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      G   +++  HPA+  L R +  + GL              K    ++ A +YL
Sbjct: 68  LQIRARNGADLERIHKHPAYVELERYAFGEFGLAAMSHRGGVFGAPDKLPPMVKYALVYL 127

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             Q E G     S+T +    L    +  +   +  ++ S++ D         T     +
Sbjct: 128 FVQAEFGLCCPLSMTDSLTRTLVKFGSEELVNTYFDQLTSQDMD---------TVFQGAM 178

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254
            +TE+  G+D+ AI +   ++ DG + L G KWF S+P +   ++LA+ EG       + 
Sbjct: 179 FMTEQAAGSDVGAIDTTA-RLEDGEWKLYGDKWFCSNPDAALGMVLARPEGGDAGTRGLS 237

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            FL+PR L DGS N     RLK K+G +S A+ E+       +L+GD       + DM  
Sbjct: 238 LFLLPRTLPDGSKNAYRILRLKEKMGTKSMASGEITLDGATAYLVGDPGQGFKQMTDMIN 297

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L + + S   MR +++EA+  ++ R   G  LID P+M+R +  + +      ++ F
Sbjct: 298 MSRLANGVRSAGLMRRAVSEALFISKNRTAFGKRLIDLPLMRRQLMKMLVTAEQGRSMVF 357

Query: 375 RLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A     + +  ++ A   RI+ P+ K+  C+ A  V  +AME  GG GYIEE S AR 
Sbjct: 358 HTAKVLQASDAGDAKMAKVLRILTPLIKFRTCRDARKVAGDAMEVRGGCGYIEEWSDARV 417

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS------TLEQDLGSSGKKVITIL 487
            R++   SI  G+ N + LDV     +   L + LF       T     G     ++  L
Sbjct: 418 LRDAHLGSIWEGTSNIVALDVARATRREGAL-DALFDYCSTLLTEAASKGLMVGDILERL 476

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH- 546
             S+         A    E      +AA+     ++     + + +  +        L  
Sbjct: 477 TRSVDFLNAVANDADREGE----VRAAASAVYNAVSATVLAWEDAQLSERAGYAGDRLAL 532

Query: 547 GRFNAAH 553
            R   AH
Sbjct: 533 ARAVVAH 539


>gi|115461843|ref|NP_001054521.1| Os05g0125500 [Oryza sativa Japonica Group]
 gi|47900455|gb|AAT39231.1| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|57863927|gb|AAS90672.2| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113578072|dbj|BAF16435.1| Os05g0125500 [Oryza sativa Japonica Group]
 gi|215694715|dbj|BAG89906.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630047|gb|EEE62179.1| hypothetical protein OsJ_16966 [Oryza sativa Japonica Group]
          Length = 409

 Score =  295 bits (755), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 70/422 (16%), Positives = 142/422 (33%), Gaps = 26/422 (6%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           L  ++     +  +        +   T ++     +          P     D     P 
Sbjct: 8   LPGILRRGDGLARRLYSSASSLLFDDTQEQFKESVHKFA--QETIAPHAAAIDASNHFPK 65

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
              L +      LH       +  +      H I    +   +        + S    + 
Sbjct: 66  DVNLWKLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEISRASGSVGLSYGAHSNLCINQ 125

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +P     + PK+ S E+                L ++E   G+D+ ++  + +K+
Sbjct: 126 LVRHGSPAQKLKYLPKLISGEH-------------VGALAMSEPNSGSDVVSMKCKAEKV 172

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  + P +   ++ A+ +   G   +   + +    G    +  +K+G 
Sbjct: 173 DGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGITAFIIEKGMPGFSTAQKLDKLGM 232

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHY 338
           R + T EL F N F      L      V  M     L  L  A   +  M+  L  A+ Y
Sbjct: 233 RGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVAVPY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++         
Sbjct: 293 VRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVYSVARDCDNGKVDRKD-------CA 345

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  + A  V  +A++C+GG+GYI E    R  R++    I  G+     + +   L
Sbjct: 346 GVILFAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGREL 405

Query: 459 EK 460
            K
Sbjct: 406 FK 407


>gi|167739400|ref|ZP_02412174.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 470

 Score =  295 bits (755), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 33/454 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           AR  R++   SI  G+ N + LDV   +++   L
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL 459


>gi|312892236|ref|ZP_07751733.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311295366|gb|EFQ72538.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 390

 Score =  295 bits (755), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 146/395 (36%), Gaps = 32/395 (8%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV- 128
           A+     A  N        P    WD+ +  P    L ++    GL   +    +     
Sbjct: 24  ARMAGDFAEKN------IRPYVMDWDETQTFPV--DLFKKLGELGLMGVLVPEMYGGSGF 75

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               +      +  +       + + +      +           W PK+ + E+     
Sbjct: 76  GYFEYVTVIVEIAKVCGSIGLSVAAHNSLCTGHILAFGNEEQKHRWLPKLATGEW----- 130

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                       GLTE   G+D   + +      D         W       +  +++ +
Sbjct: 131 --------IGAWGLTEANTGSDALGMNTTAILDGDHYVVNGSKNWITHGKSGNVAVVMVR 182

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
              +     +  L+ +   +G  + + +NK+G R++ T EL F N        L     G
Sbjct: 183 TGEKGDSHGISALVVEKGTDGFTHGKKENKLGMRASETTELIFDNCRVPRENLLGSQGDG 242

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + MK+L    +  A +S+   + +   A+ YA+ RH  G  + +   +   +AD+A +
Sbjct: 243 FKQAMKVLDGGRISIAALSLGIAKGAFEAAVKYAKERHQFGQPICNFQGISFKLADMATE 302

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L  + A+  +  KS ++++A A       KY+  ++A     +A++  GG GY 
Sbjct: 303 IEAAQLLIMQAADLKNRNKSVTKQSAMA-------KYFASEVAVKAANDAVQIFGGYGYT 355

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  + + YR++   +I  G+     + +   + K
Sbjct: 356 KDFPVEKFYRDAKLCTIGEGTSEIQKIVIAREVLK 390


>gi|302875798|ref|YP_003844431.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307689233|ref|ZP_07631679.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302578655|gb|ADL52667.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 379

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 143/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK    P     + +     L    +   FE       ++ I    L  +    
Sbjct: 26  PIAAEIDKNHRFPV--ETVEKMAKLNLLGIPFPTEFEGAGGDNLSYTIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A++V    TP   K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCAAVVNQFGTPDQKKKYLPDLASG-------------RKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   ++ FI+ A  +   G   +   + + S
Sbjct: 131 GTDAAGQQTTAVLDGDN-YILNGSKIFITNGGYAETFIVFAMTDRSKGTKGISAFIVEKS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSV 325
             G    +++ K+G R+++T EL F N        L  V  G    MK    LD   + +
Sbjct: 190 FPGFSIGKVEEKLGIRASSTTELIFENCVVPKENLLGQVGKGFGIAMK---TLDGGRIGI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     EA  Y + R   G  L     ++  +AD+ + I +A  L +  A   
Sbjct: 247 AAQALGIAGGAFNEAKAYMKERKQFGRSLDKFQGLQWMMADMEVAIESARYLVYLAAWKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    + EAA A++ A         +A  V  +A++  GG GY  E  + R  R++   
Sbjct: 307 DQGLPYTVEAARAKLHAA-------NVAMDVTTKAVQLFGGYGYTAEYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   + K
Sbjct: 360 EIYEGTSQVQQMVIAGNIFK 379


>gi|332654387|ref|ZP_08420130.1| butyryl-CoA dehydrogenase [Ruminococcaceae bacterium D16]
 gi|332516351|gb|EGJ45957.1| butyryl-CoA dehydrogenase [Ruminococcaceae bacterium D16]
          Length = 380

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 135/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  E  D+ E  P     + +    G+    + + +        ++ +    L  +    
Sbjct: 26  PLAEELDEEERFPM--ETVEKMGKLGMMGIYFPKKYGGAGGDVLSYAMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +    + +    T      + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCCAPIYEHGTEEQKMKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +      D  Y L+G K F+++  ++   ++ A  + + G   +   + + S
Sbjct: 131 GTDASGQQTTAVLEGDH-YVLNGSKCFITNGTVASTMVVFAMTDPKAGNHGISAFIVESS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + + K+G R ++T +L F +         N+     +  KI +  LD   + +
Sbjct: 190 FPGFSVGKKEKKMGIRGSSTCDLIFEDCIVP---KENLLGKEGQGFKIAMQTLDGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + L      EA+ Y + R      L      +  +AD+   + AA  L +  A   
Sbjct: 247 AAQALGLGEGAIDEAVKYTQERIQFKKRLSQFQNTQFQLADMHTRMKAAQYLVYAAACKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S +AA A       K +  + A  V   A++  GG GY  E  + R  R++   
Sbjct: 307 ENHEPYSVDAAMA-------KLFAAEAASDVTRRAVQLFGGYGYTREYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   +
Sbjct: 360 EIYEGTSEVQRMVISRAM 377


>gi|257065599|ref|YP_003151855.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256797479|gb|ACV28134.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 642

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 143/374 (38%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    +++     G     + + +        ++ I    L  +    
Sbjct: 26  PIAFDLDQKNEFPD--DIVKEMGELGFLGIPYPKEYGGQGLDVISYAIVVEELSRVDGGV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   +  +    T    K +               P+ K     G GLTE+  
Sbjct: 84  GVICSAHTSLGSWPIFAFGTEEQKKKYL-------------TPLAKGEKLGGFGLTEENA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +  +   D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T EL F N         N+     +  KI +  LD   + +
Sbjct: 190 FEGFTFSDHYDKLGIRSSSTAELHFENVKVP---KENLLGKEGQGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + + +     A+ YA+ R   G  +         +AD+A  +  A  + ++ A   
Sbjct: 247 ASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADMATQLHGARLMIYQAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S EAA A+ +A         +A  +  EA++  GGSG+I+   + R +R++   
Sbjct: 307 ENHERYSAEAAMAKQVA-------SDLAMKISTEAVQIYGGSGFIKGVDVERFFRDAKIT 359

Query: 441 SILLGSGNAMVLDV 454
            I  G+   M + V
Sbjct: 360 QIYEGTNEIMRVVV 373


>gi|160915981|ref|ZP_02078189.1| hypothetical protein EUBDOL_02009 [Eubacterium dolichum DSM 3991]
 gi|158432457|gb|EDP10746.1| hypothetical protein EUBDOL_02009 [Eubacterium dolichum DSM 3991]
          Length = 379

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 137/377 (36%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + + +   +    + R +          I A           
Sbjct: 26  PLAGEIDEEERFP--RETVDKMVACKMFGIPFSREYGGAGADYLSYILAVEELSKVCATT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  +  +    TP     + P + S                    GLTE   
Sbjct: 84  GVILSAHTSLGTFPIDAFGTPEQKAKYLPDLCSG-------------KKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +   K  D  Y ++G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTTAVKDGDD-YIINGSKIFITNAGEADIYVIFAMTDKSQGTRGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    + + K+G R++AT EL F+N       LLG                 +  A  
Sbjct: 190 MPGFTIGKHEKKLGIRASATCELIFNNVRVSKDHLLGQEGKGFKIAMQTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + ++ EA+ Y + R   G  +      +  +AD+     AA  L +  A + +  
Sbjct: 250 ALGIAQGAIDEAVAYVKSRKQFGRPIAKFQNTQFQLADMQTKTDAARLLVYNAAMAKENG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA A++ A          A  V  +A++ +GG GY  +  + R +R++    I 
Sbjct: 310 QPYTFAAAEAKLFAAEV-------AMEVTTKAVQLLGGYGYTRDYPVERMFRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 363 EGTSEVQRMVISGQMLK 379


>gi|39934769|ref|NP_947045.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39648619|emb|CAE27140.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 595

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 138/518 (26%), Positives = 226/518 (43%), Gaps = 39/518 (7%)

Query: 28  PPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G+N Y +D  L  L+  + P      +   L+ LG         E AR+A+ +TP
Sbjct: 23  APDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGALAGGR-LDECARLADRHTP 81

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     G     VE+HPA+  L   +    G+H     +             + A   
Sbjct: 82  ILHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVYPVTAKHAFTL 141

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  + E G     +VT   A +++      +   +   +   +     +          G
Sbjct: 142 LFNETEFGMGCPINVTDGCAKLLSKFGDEALKAKYLDGLTQTDMSKLTQG---------G 192

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  +TS      D    L G KWF S+  +   ++LA+ EG       V
Sbjct: 193 QFMTEKEGGSDVGTLTSVAVPDGDHF-RLYGEKWFCSNADAKVVMLLARPEGAGPGTRGV 251

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G FL+PR L+DG PN     RLK+K+G RS A+ E++      + +G L+     + +M 
Sbjct: 252 GLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQMAEMV 311

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L + + S + MR +  +AI  A  R V G  ++D P+ +R +  I +      ++S
Sbjct: 312 NSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQGMSIS 371

Query: 374 FRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           F  A++ D A+  S++ AA  RI+ P  K+   + A  V  +A+E  GG GY+EE + AR
Sbjct: 372 FLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEEFATAR 431

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------KVIT 485
             R++   SI  G+GN + +D L            L + L   L  + +       ++  
Sbjct: 432 LLRDAHLGSIWEGTGNIVAIDALKRAIGRHGAESALGADLHARLDDAARVPQTWRDRLRG 491

Query: 486 ILRDSISLCK------EDKGLARFLTEKIALASSAAAL 517
           ++  SIS  +      E++  AR  T  +   +SA AL
Sbjct: 492 LIDRSISFGRDVARNSENEADARRATSALYHVASAVAL 529


>gi|317472252|ref|ZP_07931580.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316900209|gb|EFV22195.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 384

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 137/402 (34%), Gaps = 36/402 (8%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+ +L  T +E A             GP  E  D+    P       +    GL      
Sbjct: 8   GQEMLKKTVREFAE---------KVVGPRAEEVDQTGIFP--RDTFEQMAKLGLTGIGTP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +         K+               ++S     AS++    +    K + P++ S 
Sbjct: 57  EEYGGSGGNDIDKVITVTELAKKCAATAGILSIHTIFASVLLKFGSEEQKKKYLPEVTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMS 240
            +                  LTE   G+D AA+ +      + G Y L+G K F+S    
Sbjct: 117 GH-------------LAAFALTEPNAGSDAAAVRTTAVLDEETGEYVLNGTKCFISGGGQ 163

Query: 241 DAFI-MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             ++ + A  +   G   +  +L +    G    +++NK+G   + T EL F        
Sbjct: 164 AKYLLIFALTDPSKGVKGLSCILVEKGTPGFTVGKIENKMGIHGSETAELIFDQCRVPKE 223

Query: 300 GDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +       +          +  A  ++     +L E++ Y   R   G  +     ++
Sbjct: 224 NLVGKEGAGFKMAMNALDGARIGVAAQALGIAEGALDESVKYMNERVQFGKPIKALQGLQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+A     A  + +  A      +  ++EAA       I K    + A  V   A+
Sbjct: 284 WYIADMATKTECAKWMIYYAAYLKSTGQPHTKEAA-------IAKLNASENARFVTNLAL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY+++  + R YR++    I  G+     + +   +
Sbjct: 337 QIHGGYGYMKDYPLERMYRDAKITEIYEGTSEIHKVVISRAV 378


>gi|331270390|ref|YP_004396882.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329126940|gb|AEB76885.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 379

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 132/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P      ++    G+    + + +          I A      A    
Sbjct: 26  PMAAETDATGIFPM--ENYKKLAKYGVIGLPYPKEYGGTGGDYLSYILAVEEVSKACGTT 83

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GIAFSVNTSLCCGAIYQNGTEDQKKKYLPDLCSG-------------KKIGCFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  +   K  D  Y L+G K F+++ P++D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAGQTIAVKDGD-KYILNGQKCFITNAPIADVFVIFAMTDKSKGNKGITAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G       E+   +        L     G    MK L    +  A  
Sbjct: 190 FPGISIGKVEDKMGINGAQVGEIILEDCPVPAENLLGKEGRGFGIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +  EA  Y + R   G  L     +   +AD+ + I  +  L ++ A   ++ 
Sbjct: 250 GLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSRHLLYKAAMDKNDG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  AA A       K  C   A  V  EA++  GG GYI++  + R +R++    I 
Sbjct: 310 RPYSVSAARA-------KLSCTDTAMYVTTEAVQLFGGYGYIKDYPVERMFRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|239817931|ref|YP_002946841.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804508|gb|ACS21575.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 574

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 138/520 (26%), Positives = 224/520 (43%), Gaps = 25/520 (4%)

Query: 29  PLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQL 84
           P   G N +S+D+ L  L+A   P+ +   ++   E +       L      A+ N P L
Sbjct: 19  PDRHGQNLFSTDTELHKLLALYLPADLLAHMQPHFERLGGLAGGLLDDLAGTADRNPPTL 78

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                 G    KV  HPA+  + R ++ + GL              +    ++    YL 
Sbjct: 79  KQRTRTGLDEQKVVKHPAYVEMERLALSEFGLAAMSHRDQTLGWKGRMPPLVKYVLTYLF 138

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P +   + P++ S ++D   +  M          
Sbjct: 139 VQAEFGLCCPVSMTDSLTRTLKKFGGPELVARFLPRLTSLDFDELAQGAMF--------- 189

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGC 255
           +TE+  G+DIAA  +  ++ +DG + LSG KWF S+P +D  ++LA+ +        V  
Sbjct: 190 MTEQAAGSDIAATATMARQEADGSWRLSGDKWFCSNPDADFAMVLARADNGPAGMKGVSL 249

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
           FL+PR LEDGS N     RLK+K+G RS A+ E+       +L+G+       + DM   
Sbjct: 250 FLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLEGAVAYLVGEEGRGFVQMADMVNN 309

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L + + +   MR ++AEA + A  R   G  L   P+M+R +  + L    A  +  +
Sbjct: 310 SRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQRQLDKLRLPAEQARTMVCQ 369

Query: 376 LANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A +   + +   +A A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE S  R  
Sbjct: 370 TALALARSDAGEPDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWSDPRLV 429

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISL 493
           R++   SI  G+ N + LDV+  +++  +L   L +  EQ L  ++              
Sbjct: 430 RDAHLGSIWEGTSNIVALDVIRAVKREGSLP-VLRAHCEQLLADAALPPAFAKALRDALA 488

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
                           LA  AA+      + IA  +   R
Sbjct: 489 RAAALAETAAREGGDVLARQAASALYHCTSSIAMAWEAAR 528


>gi|257066844|ref|YP_003153100.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256798724|gb|ACV29379.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 379

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 145/378 (38%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     + +    G     +D  +  +       +        A    
Sbjct: 25  PLAIEVDEKHMFPE--DNVAKMQELGFFGIPFDEEYGGIGLDTLTYVLCVEELSKACATT 82

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A  +         + +   + S E                   LTE   
Sbjct: 83  GVIVSAHTSLCADCINKFGNEEQKEKYLTPLASGE-------------KLGAFALTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +  +   D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 130 GTDASGQKTVAKLDGDH-YVLNGSKIFITNAGYADTYVVFAMTDKEQGTRGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G  +  +++K+G + ++T+EL F +         N+     +  K  +  LD   + +
Sbjct: 189 MEGFDFGTVEDKMGIKGSSTMELIFRDCKVP---KENLLGEEGKGFKYAMQTLDGGRIGI 245

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y + R+  G  L      +  +A++A+DI +A  L ++ A   
Sbjct: 246 AAQALGIAEGALDKAVKYVKERNQFGRPLAKFQNTQFKLAEMAIDIESARHLVYKAATLK 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +S +  AA         K    ++A  V  +A++ +GG GYI+E  + R  R++   
Sbjct: 306 DAGESYTVAAA-------EAKLKASRVAMDVTTKAVQLLGGYGYIKEYEVERMMRDAKIT 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M++ V   L
Sbjct: 359 EIYEGTSEVMLMVVSGAL 376


>gi|253680925|ref|ZP_04861728.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253562774|gb|EES92220.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 130/377 (34%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P      ++    G+    + + +          I A      A    
Sbjct: 26  PIAAETDATGVFPM--ENYKKLAKYGVIGLPYPKEYGGTGGDYLSYILAVEEVSKACGTT 83

Query: 149 -GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GIGFSVNTSLCCGAIYQNGTEDQKKKYLPDLCSG-------------KKIGCFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  +   K  D  Y L+G K F+++ P++D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAGQTIAVKDGD-KYILNGQKCFITNAPIADVFVIFAMTDKSKGNKGISAFIVEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G       E+   +        L     G    MK L    +  A  
Sbjct: 190 YPGISIGKVEDKMGINGAQVGEIILEDCPVPAENLLGKEGRGFGIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +  EA  Y + R   G  L     +   +AD+ + I  A  L ++ A   +  
Sbjct: 250 GLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMDVRIEQARYLLYKAAMDKNNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S  AA A++        C   A  V  EA++  GG GYI++  + R +R++    I 
Sbjct: 310 KPYSVSAARAKLA-------CTDAAMYVTTEAVQLFGGYGYIKDYPVERMFRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|255530052|ref|YP_003090424.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255343036|gb|ACU02362.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 379

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 108/284 (38%), Gaps = 10/284 (3%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S         P+          L+E   G+D  +  +  +   D         W  +   
Sbjct: 103 SDFQKEKYLKPLAAGEKIGAFCLSEPEAGSDATSQQTTAEDKGDHYLLNGTKNWITNGGT 162

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  ++++AQ +  +    +   + +    G      +NK+G R + T  L F++      
Sbjct: 163 ASTYLVIAQTDKSLRHKGINAFIVEKGMEGFTVGPKENKMGIRGSDTHSLMFNDVKVPKE 222

Query: 300 GDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +     G    MK L    +  A  ++     +   A+ YA++R   G  + +   + 
Sbjct: 223 NRIGENGFGFKFAMKTLEGGRIGIAAQALGIAAGAYELALDYAKQRKAFGKPIAEHQAIA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  L ++ A   D+ +  +   + A       K +  K+A  V  EA+
Sbjct: 283 FKLADMATHIEAARLLVYKAAWLKDQGQPYTLAGSMA-------KLYASKVAMEVTVEAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG G+++E  + R  R++    I  G+     + +   + +
Sbjct: 336 QIHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQKMVISREIIR 379


>gi|295103292|emb|CBL00836.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii SL3/3]
          Length = 637

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 151/426 (35%), Gaps = 42/426 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
             +++    G     + + +            A           G ++S  V+     + 
Sbjct: 40  EAVKKLGKLGWMGIPYPKEYGGAGLDALSYAIAVEELARVDGGTGVILSAHVSLGSWPIF 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K +               P+ K       GLTE   G+D     +      D
Sbjct: 100 AYGTEEQKKKYL-------------VPLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 G  +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS
Sbjct: 147 YYLLNGGKIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRS 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T EL F+N         N+     E  KI +  LD   + ++   + +A+     A+ 
Sbjct: 207 SSTAELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALS 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  +  Q  +   +AD+A  +  A  L +  A   ++      E+A A++  
Sbjct: 264 YSKERVQFGKPIAAQQSIAFKLADMATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +   +A  V  +A++  GGSGY++   + R YR++   ++  G+     + + + 
Sbjct: 322 -----YASDIALEVTNDALQIHGGSGYLKGMEVERAYRDAKITTLYEGTNEIQRVVIASH 376

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
                     L   L +  G   +           + K+         +++A   +A  L
Sbjct: 377 ----------LLGRLGKSSGGESRSAAKKPAPITGIRKKTIFREGDAAQQVADLVAA--L 424

Query: 518 YRAGMN 523
            + G +
Sbjct: 425 KKDGHD 430


>gi|163943030|ref|YP_001647914.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163865227|gb|ABY46286.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 376

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 38  KGILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 98  LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKD 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 145 DHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 205 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 262 DYAKEREQFGKPIAAQQGLGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 315 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 374

Query: 457 LL 458
            L
Sbjct: 375 AL 376


>gi|313115923|ref|ZP_07801350.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621687|gb|EFQ05215.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 637

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 151/426 (35%), Gaps = 42/426 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
             +++    G     + + +            A           G ++S  V+     + 
Sbjct: 40  EAVKKLGKLGWMGIPYPKEYGGAGLDALSYAIAVEELARVDGGTGVILSAHVSLGSWPIF 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K +               P+ K       GLTE   G+D     +      D
Sbjct: 100 AYGTEEQKKKYL-------------VPLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 G  +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS
Sbjct: 147 YYLLNGGKIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRS 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T EL F+N         N+     E  KI +  LD   + ++   + +A+     A+ 
Sbjct: 207 SSTAELIFNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALS 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  +  Q  +   +AD+A  +  A  L +  A   ++      E+A A++  
Sbjct: 264 YSKERVQFGKPIAAQQSIAFKLADMATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +   +A  V  +A++  GGSGY++   + R YR++   ++  G+     + + + 
Sbjct: 322 -----YASDIALEVTNDALQIHGGSGYLKGMEVERAYRDAKITTLYEGTNEIQRVVIASH 376

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
                     L   L +  G   +           + K+         +++A   +A  L
Sbjct: 377 ----------LLGRLGKSSGGESRSAAKKPAPITGIRKKTIFREGDAAQQVADLVAA--L 424

Query: 518 YRAGMN 523
            + G +
Sbjct: 425 KKDGHD 430


>gi|331002206|ref|ZP_08325725.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411300|gb|EGG90716.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 382

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           +  ++    P    +L++    G       +          ++ +  + +  ++ + + +
Sbjct: 31  DEVEETGVFPE--EVLQKMAKAGFFGIKIPKELGGQGADARSYVLVMSEIAKVSGVASIY 88

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + SP+  S   + L       + +               P+ +    +   LTE   G+D
Sbjct: 89  VSSPNSLSGGPLLLAGNDEQKRKYL-------------TPVVRGEKKLSFALTEPGAGSD 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A +T+   K  D  Y L+G K F++ +P+SD  ++ A+ +   G   V   + D    G
Sbjct: 136 AAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAKTDMTKGTRGVSAFIIDMKQEG 194

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +   + ++K+G    AT ++   N       LLG+                L  A  ++ 
Sbjct: 195 VSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKGFNLAMATLDTGRLGVASQAIG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L EA  YA+ R   G  +     +   IAD+A  + AA  L++R A   D  +  
Sbjct: 255 VAEGCLEEACKYAKERKQFGKNIGAFQAIGFTIADMATKLEAAKQLTYRAAYMMDTKQDS 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A+ A       K +  ++   + A+A++  GG GYI++  + R YR+    +I  G+
Sbjct: 315 GMAASMA-------KLYSTEVCNEIAAKAVQIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367

Query: 447 GNAMVLDVLNLLEK 460
                + + + L K
Sbjct: 368 SQVQQIVISSKLLK 381


>gi|260903971|ref|ZP_05912293.1| putative acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 570

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 134/523 (25%), Positives = 226/523 (43%), Gaps = 42/523 (8%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKEL-----ELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN    D  L  LI ++     +EL       LG          LA +A+ N P+L  + 
Sbjct: 1   MNYVDLDPALQPLIESYLESADRELLAPVLTALGADAA-QRLAPLADVADKNPPRLEQFN 59

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G+R D +++H ++  L + +  +    ++  R          H ++    Y+  Q E 
Sbjct: 60  REGDRVDTIDYHHSYQELQKAAYEEYGLSALSHRGLHGWDDVPPHLVKYILSYVFVQAEF 119

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     S+T A+   L          +   ++ S + D               + +TE  
Sbjct: 120 GLACPVSMTDAAARTLRKFGDGEQIAEAIDRLISTDSDHR---------FTGAMFMTEIH 170

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ------VEGRVGCFLVPR 260
            GTDIA  ++  ++  +  + LSG KWF S+P +D  + LA+          VG F++P+
Sbjct: 171 AGTDIAQTSTVAERDGEN-WALSGRKWFASNPDADIILTLARFPGGDDTTRGVGLFMLPK 229

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
              DG+ N     RLK+K+G RS  + E+  +  +   +G L      + +M     L +
Sbjct: 230 HRPDGTKNSYVIDRLKDKLGTRSMPSGEVTLNGAYAVQVGALERGFLQMAEMVNTSRLSN 289

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ + + MR S+ EA+ +AR+R V G  LI+ P+M+  +  +  +  AA  L F   +  
Sbjct: 290 AMRATALMRRSINEALAHARQRVVFGKALIEAPLMRMTLLPLQAEAEAALGLVFYAGDML 349

Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +A +    AA   R++ P+ K++ CK A  V  EAME  GG GYIEE   AR  R+S  
Sbjct: 350 QKADAGDASAAAQIRVLTPLAKHYICKRARFVTGEAMEVRGGRGYIEEFPDARLVRDSHL 409

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--------DLGSSGKKVITILRDSI 491
            SI  GS N + LDVL  + K  N  + L  T+ Q        + G   ++++T     +
Sbjct: 410 GSIWEGSSNVIALDVLRCIRK-QNTHQLLAETMTQKLNTITLAEAGPETRELLTRWTAIV 468

Query: 492 --------SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
                   +     + L     + +A    A  L      +++
Sbjct: 469 DRGDVILSAEPDAAEALIGGYADDLAQLIMATLLLEQADAEVS 511


>gi|290967961|ref|ZP_06559510.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781867|gb|EFD94446.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 381

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 147/405 (36%), Gaps = 33/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS T Q++A++A           P  +  D+ E       L+      GL    W+ 
Sbjct: 2   DFKLSETQQDIAKLARDFAE--KKLAPTVKDRDEKEVFD--RTLVDEMGELGLLGIPWEE 57

Query: 123 SFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
               V         A      +    A      ++  +  +    T      +       
Sbjct: 58  KDGGVGADFVSVAVACEEVAKVDPSIALSFEVHTMLCSWPIWKFGTEEQKAKYLK----- 112

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMS 240
                   P+ +       GLTE   GTD    ++   K +DG Y L+G K F  +   +
Sbjct: 113 --------PLAEGKKLGAFGLTEPNAGTDALNGSTTATKNADGTYTLNGSKVFNTNGGDA 164

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +  I+ A  +   G   +   + +    G  Y + + K+G R+    EL F +       
Sbjct: 165 EITIVFAATDKSKGAKGMSAFIVEKGTPGFSYGKKEVKMGIRACVQRELVFQDVVVPA-- 222

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
             N+     E  KI ++ LD   + V    + +AE     A+ YA  R   G  ++ Q  
Sbjct: 223 -ANLLGKEGEGFKIAMMTLDGGRVGVGAQALGIAEGAFNKAVQYANERIQFGKPIMKQQA 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+ L I  A    ++ A    +     ++     + A I K +   +A  V  +
Sbjct: 282 VAFMLADMKLKIETARWAVYKAAWKMGQ-----KDVKSYSMDASIAKKYASDIAMQVTTD 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           A++  GG G+  +  + R+ R++    I  G+     + +   L+
Sbjct: 337 AVQVFGGYGFTRDYPVERYMRDAKITQIYEGTNQVQQMIISGFLK 381


>gi|76802143|ref|YP_327151.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160]
 gi|76558008|emb|CAI49593.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160]
          Length = 384

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 143/376 (38%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +D+ E +P    ++ ++  +GL        +     +             A    
Sbjct: 26  PVAKEYDREEKYP--WEVVEKAAENGLLAPQIPLDYGGAGYEVLDTAIIVEELFAADPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +      +    T    +++              AP+       G  ++E   G
Sbjct: 84  GLCLCSTGFGTEAIIEYGTEEQKEEYL-------------APIATGDAICGAAISEPDTG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+++++++ +K  D         W  +  + D F++L + +           +++ +  
Sbjct: 131 SDVSSVSTRAEKDGDEWVINGNKMWITNGSVGDFFVVLCKTDPDAEGRYNGFSQIIVESD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G    ++  K+G R++ T EL   +        +     G ++ M+         A  
Sbjct: 191 RDGFEADKITGKLGIRASDTAELILDDVRVPEENLVGTEGMGFLQQMQFFDETRTGVAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +   A+ YA+ R   G  + D   ++  +AD+  ++ AA  L+++ A S D A
Sbjct: 251 GVGIAKGAAERALEYAQEREQFGRPIGDFQAIQHKLADMHTNVEAARNLTYKSAWSVDNA 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             +         +A + K +  ++A     E ++  GGSGY+++    R +R++    I 
Sbjct: 311 DGQ------LTKLASMAKEYASRVAVENANECVQIHGGSGYVDDFDAERFFRDAKITQIY 364

Query: 444 LGSGNAMVLDVLNLLE 459
            G+     + +   L+
Sbjct: 365 EGTTEIQKMIIARELQ 380


>gi|291484854|dbj|BAI85929.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. natto BEST195]
          Length = 379

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 131/364 (35%), Gaps = 26/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 37  FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + P + S ++                  LTE   G+D  ++ +   K  
Sbjct: 97  LYFGNEEQKMKYIPNLASGDH-------------LGAFALTEPHSGSDAGSLRTTAIKK- 142

Query: 223 DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G Y L+G K F+++  + D +I  A      G   +   + + +  G    + + K+G 
Sbjct: 143 NGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGL 202

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T EL F N        L     G    M  L    +  A  S+     +L  A+ Y
Sbjct: 203 YGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQSLGIAEAALEHAVDY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  +     +   +AD+A    AA  L +  A+  +   +  +EA+ A+    
Sbjct: 263 AKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQ--- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +    A     +A++  GG GY+++  + R  R++    I  G+     L +   L
Sbjct: 320 ----FASDAAVKAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYL 375

Query: 459 EKGT 462
             GT
Sbjct: 376 LGGT 379


>gi|332971448|gb|EGK10402.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 380

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 134/364 (36%), Gaps = 30/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+R+    GL        +          I A           G +++   +  +   L
Sbjct: 40  ELVRKMGELGLMGIPVPEEWGGAGADFVSYILALEEIAKVSAATGVILAVHTSVGTFPIL 99

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  ++   EY                  LTE   G+D +AI ++  +  D
Sbjct: 100 RYGTEEQKQKYVSRLAQGEY-------------LGAFALTEPHAGSDASAIRTRAVRKGD 146

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L G K F+++   +D ++  A  +   G   +   + +    GL   + + K+G  
Sbjct: 147 -RYILDGSKIFITNAGAADTYVTFAVTDPDQGSKGISAFIVEKDTPGLIVGKKEKKMGLG 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIH 337
            + T EL   +    +   L       E    L  L    + +    + +A      A  
Sbjct: 206 GSNTSELILESAEVPVKNRLGREGQGYE--IALSNLAGGRIGIGAQALGIATSALEVATA 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ RH  G  +     ++  +ADIA ++ AA  L +R A  + E +   +E++ A++  
Sbjct: 264 YAKERHQFGRPIGKLQAIQYKLADIATEVEAARLLIYRAATLYQEGRPCRKESSMAKM-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +    A     EA++  GG GY  E  + R +R++    I  G+     L +   
Sbjct: 322 -----FASDTAMKATVEAVQVFGGYGYTREYPVERLFRDAKITQIYEGTNEIQRLVIAGE 376

Query: 458 LEKG 461
           L KG
Sbjct: 377 LLKG 380


>gi|315652762|ref|ZP_07905736.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
 gi|315484964|gb|EFU75372.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
          Length = 382

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           +  ++    P    +L++    G       +          ++ +  + +  ++ + + +
Sbjct: 31  DEVEETGVFPE--EVLQKMAKAGFFGIKIPKELGGQGADARSYVLVMSEIAKVSGVASIY 88

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + SP+  S   + L       + +               P+ +    +   LTE   G+D
Sbjct: 89  VSSPNSLSGGPLLLAGNDEQKRKYL-------------TPVVRGEKKLSFALTEPGAGSD 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A +T+   K  D  Y L+G K F++ +P+SD  ++ A+ +   G   V   + D    G
Sbjct: 136 AAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAKTDMTKGTRGVSAFIIDMKQEG 194

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +   + ++K+G    AT ++   N       LLG+                L  A  ++ 
Sbjct: 195 VSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKGFNLAMATLDTGRLGVASQAIG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L EA  YA+ R   G  +     +   IAD+A  + AA  L++R A   D  +  
Sbjct: 255 VAEGCLEEACKYAKERKQFGKNIGAFQAIGFTIADMATKLEAAKQLTYRAAYMMDTKQDS 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A+ A       K +  ++   + A+A++  GG GYI++  + R YR+    +I  G+
Sbjct: 315 GMAASMA-------KLYATEVCNEIAAKAVQIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367

Query: 447 GNAMVLDVLNLLEK 460
                + + + L K
Sbjct: 368 SQVQQIVISSKLLK 381


>gi|70998024|ref|XP_753744.1| isovaleryl-CoA dehydrogenase IvdA [Aspergillus fumigatus Af293]
 gi|66851380|gb|EAL91706.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus
           Af293]
 gi|159126519|gb|EDP51635.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus
           A1163]
          Length = 462

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 82/428 (19%), Positives = 152/428 (35%), Gaps = 37/428 (8%)

Query: 41  SLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
               +L    P         EL  L E V     QE  R      P+         R D 
Sbjct: 61  PASRSLATKHPKGFVPPTEDELLELRERV-----QEFTR---REIPE-----EVAARTDS 107

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPS 155
               PA   + R+    G      +  +  +    QAH I    L   +   A    + S
Sbjct: 108 QNEFPA--EMWRKLGDAGFLGVTANEEYGGLGMGYQAHCIVMEELSRASGSIALSYAAHS 165

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
               + ++L  T      + P + S E                 L ++E   G+D+ ++ 
Sbjct: 166 QLCVNQLSLNGTEEQKARFLPGLLSGE-------------KIGALAMSEHSAGSDVVSMK 212

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           +  + +  G        W  + P +D  ++ A+ E   G   +   + + +  G    R 
Sbjct: 213 TTAKAVDGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGISAFVVEKTFKGFSCARK 272

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G R + T EL F + F     LLG+LN     + +   L  L  +   +  M+ +L
Sbjct: 273 LDKLGMRGSNTGELVFEDVFVPKENLLGELNKGVRVLMEGLDLERLVLSAGPLGIMQAAL 332

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R   G  +    +++  +AD+   ++A+ A ++  A   D + +   E + 
Sbjct: 333 DLVLPYTHTRKQFGAPIAHNQLIQGKLADMYTKLSASRAYTYATARHIDNSAATG-EVSI 391

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                     +  + A     +A++ +GG+GYI E    R  R++    I  G+     +
Sbjct: 392 RTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRM 451

Query: 453 DVLNLLEK 460
            +     K
Sbjct: 452 VIGRAFNK 459


>gi|167748223|ref|ZP_02420350.1| hypothetical protein ANACAC_02967 [Anaerostipes caccae DSM 14662]
 gi|167652215|gb|EDR96344.1| hypothetical protein ANACAC_02967 [Anaerostipes caccae DSM 14662]
          Length = 384

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 137/402 (34%), Gaps = 36/402 (8%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+ +L  T +E A             GP  E  D+    P       +    GL      
Sbjct: 8   GQEMLKKTVREFAE---------KVVGPRAEEVDQTGIFP--RDTFEQMAKLGLTGIGTP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +         K+               ++S     AS++    +    K + P++ S 
Sbjct: 57  EEYGGSGGNDIDKVITVTELAKKCAATAGILSIHTIFASVLLKFGSEEQKKKYLPEVTS- 115

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMS 240
                       +       LTE   G+D AA+ +      + G Y L+G K F+S    
Sbjct: 116 ------------SGHLAAFALTEPNAGSDAAAVRTTAVLDEETGEYVLNGTKCFISGGGQ 163

Query: 241 DAFI-MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             ++ + A  +   G   +  +L +    G    +++NK+G   + T EL F        
Sbjct: 164 AKYLLIFALTDPSKGVKGLSCILVEKGTPGFTVGKIENKMGIHGSETAELIFDQCRVPKE 223

Query: 300 GDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +       +          +  A  ++     +L E++ Y   R   G  +     ++
Sbjct: 224 NLVGKEGAGFKMAMNALDGARIGVAAQALGIAEGALDESVKYMNERVQFGKPIKALQGLQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+A     A  + +  A      +  ++EAA       I K    + A  V   A+
Sbjct: 284 WYIADMATKTECAKWMIYYAAYLKSTGQPHTKEAA-------IAKLNASENARFVTNLAL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY+++  + R YR++    I  G+     + +   +
Sbjct: 337 QIHGGYGYMKDYPLERMYRDAKITEIYEGTSEIHKVVISRAV 378


>gi|229087835|ref|ZP_04219949.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228695471|gb|EEL48342.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 381

 Score =  294 bits (752), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
             +L +    GL        +          I A           G +++   +   + +
Sbjct: 43  REILTKMGELGLMGIPAPAKYGGAEMDFISYILAIEELSKVSATIGVILAVHTSVGTNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTEEQKQKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAIKKD 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISAFIVEKDTPGLIVGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +    +    N+     +  K+ +  LD   + +    + +A+     A+
Sbjct: 210 GSRTVQLTFEDMKVPV---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAKAALACAV 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 DYAKERQQFGKPIAAQQGLGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVDVAIEAVQVFGGYGYTKDYPVERFFRDAKICEIYEGTSEIQRLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|148380150|ref|YP_001254691.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932288|ref|YP_001384448.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934592|ref|YP_001387985.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
 gi|148289634|emb|CAL83737.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium botulinum
           A str. ATCC 3502]
 gi|152928332|gb|ABS33832.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930506|gb|ABS36005.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str.
           Hall]
          Length = 377

 Score =  294 bits (752), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTEEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAGKALK 377


>gi|270008823|gb|EFA05271.1| hypothetical protein TcasGA2_TC015428 [Tribolium castaneum]
          Length = 439

 Score =  294 bits (752), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 144/383 (37%), Gaps = 32/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +P     +R+    GL        F            A          A
Sbjct: 82  PIAAKIDREHLYP--KEQIRKMGELGLMAVAVPEEFGGTGLDYVAYAIAMEEISRGCASA 139

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     +         + +              AP           L+E   
Sbjct: 140 GVIMSVNNSLYLGPIQYFGNKEQKEKFI-------------APFTNGDKVGCFALSEPGN 186

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  +   S+A ++LA  +  +    +  ++     
Sbjct: 187 GSDAGAASTTARLDGDQWMLNGTKAWITNGFESEAAVVLATTDKSLKHKGISAIIVPKPT 246

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +         N+   P +  KI ++ LD+  + ++
Sbjct: 247 KGLELGKKEDKLGIRGSSTCSLIFEDCQVP---KANLLGEPGQGFKIAMMTLDAGRIGIA 303

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A  YA +R   G  L+    ++  +A++AL + AA  L++R A   D
Sbjct: 304 SQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLDAARLLTWRAAWLKD 363

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ ++EAA A++ A     +          + ++ +GG GY+ +    RHYR++    
Sbjct: 364 NHKNFTKEAAMAKLAASEAATYLS-------HQCIQILGGMGYVSDMPAERHYRDARITE 416

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K   L
Sbjct: 417 IYEGTSEIQRLVIAGNLIKELGL 439


>gi|254251442|ref|ZP_04944760.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124894051|gb|EAY67931.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 595

 Score =  294 bits (752), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/486 (20%), Positives = 177/486 (36%), Gaps = 72/486 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALLRRSIHD 113
           L    ++   +E  +  +     L      G+R       D V   P  +    R+ +  
Sbjct: 34  LDADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAYRQYVEA 90

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHK 172
           G      D  +       A    A    L +  +A  +       A   +     P + +
Sbjct: 91  GWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGAPELQQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y +SG K
Sbjct: 150 RYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYSISGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+SS   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V+   ++
Sbjct: 257 HKMGIHGNSTCVMNLDNAKGWIVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSL 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA+ R                  +I  P ++R +         A A ++  A   D   
Sbjct: 317 AYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQIDKEL 376

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +   R E A    ++ PI K +    A      AM+  GG G+I E  + ++ R++ 
Sbjct: 377 SHADDAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+ +   LD+L     G             D+G+  KK   I+ D +       
Sbjct: 437 INMIYEGTNSIQALDLLGRKVLG-------------DMGAKLKKFGKIVSDFVEAEGVKP 483

Query: 499 GLARFL 504
            +A F+
Sbjct: 484 EMAEFV 489


>gi|291562341|emb|CBL41157.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SS3/4]
          Length = 637

 Score =  294 bits (752), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 148/414 (35%), Gaps = 49/414 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +  H+EL            + LA + + N                 EF       +++  
Sbjct: 6   TAAHEELRAKIRSFAEEEIKPLAFLMDQNN----------------EFPE---EAVKKLG 46

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPRV 170
             G     + + +            A          AG ++S  V+     +    T   
Sbjct: 47  KLGWMGIPYPKEYGGAGLDALSYAIAVEELARVDGGAGVILSAHVSLGSWPIFAYGTEEQ 106

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K +               P+ K       GLTE   G+D     +      D      G
Sbjct: 107 KKKYL-------------VPLAKGEKIGAFGLTESNAGSDAGGTETTALDKGDYYLLNGG 153

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS++T EL 
Sbjct: 154 KIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELI 213

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           F++         N+     E  KI +  LD   + ++   + +A+     A+ Y++ R  
Sbjct: 214 FNDVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  Q  +   +AD+A  +  A  L +  A   ++      E+A A++       + 
Sbjct: 271 FGKPIAAQQSIAFKLADMATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YA 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A  V  +A++  GGSG+++   + R YR++   +I  G+     + + + L
Sbjct: 324 SDIALEVTNDALQIHGGSGFLKGMEVERAYRDAKITTIYEGTNEIQRVVIASHL 377


>gi|257463115|ref|ZP_05627516.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|317060711|ref|ZP_07925196.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313686387|gb|EFS23222.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 381

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 138/381 (36%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+        +            A      A    
Sbjct: 26  PLATELDEEERFPV--ETVKKMAEIGIMGIPIPTQYGGAGGDNLMYAMAVEELSKACGTT 83

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T    + + PK+ S E+                 GLTE   
Sbjct: 84  GVVVSAHTSLGSWPILKFGTEAQKQKYLPKMASGEW-------------IGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQ-KISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GTD +   +      +   + ++G K F+++   +  +++ A  +   G   +   + + 
Sbjct: 131 GTDASGQQTIAVFDEATQEWVINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEA 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + + K+G R +AT EL F +     L   N+     +  KI ++ LD   + 
Sbjct: 191 GTPGFSIGKKEKKLGIRGSATCELIFEDVR---LPKENLLGDLGKGFKIAMMTLDGGRIG 247

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + LA     EA+ Y + R   G  L         +A++ + + AA  L ++ A  
Sbjct: 248 IASQALGLAQGALDEAVQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWK 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                  + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 308 ESNHLPYTVDAARA-------KLFAAETAMEVTTKAVQLFGGYGYTREYPVERMMRDAKI 360

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 361 TEIYEGTSEVQRMVISGNLLK 381


>gi|156744093|ref|YP_001434222.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156235421|gb|ABU60204.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 573

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 128/532 (24%), Positives = 214/532 (40%), Gaps = 44/532 (8%)

Query: 25  LNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            +QP   +G N Y+ D +L +     L  +  + V  ++  +GE         L      
Sbjct: 18  FHQPSPTLG-NQYTDDRVLRSFLQRTLPRDVLAQVEPDMMAMGELAGG-ELYRLHLADRL 75

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P L  +   GER D +E  P W    R +   GL    ++R++  + R     ++ A 
Sbjct: 76  NEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGALSR----VVQFAL 131

Query: 140 LYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +YL       +      S  +A  +       +     P++ SR+ D             
Sbjct: 132 VYLFHPSTDVYTCPLAMSDGAARTLVQAGDAALIDRALPRLTSRDPD---------RCWT 182

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--- 254
            G  +TE  GG+D++   +  +   DG++ L G KWF S+      + LA+ EG      
Sbjct: 183 SGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATTGQMALALARPEGNPSGSR 242

Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
               F +    E+G   G+   RLK+K+G R   T EL    T   L+G LN     +  
Sbjct: 243 GLALFYIELRDEEGRLQGIRVNRLKDKLGTRKVPTAELSLEGTPARLVGALNGGVRAIVP 302

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  + +++ +VS MR  +A A  YARRR      L  QP+    +A +  +   A  
Sbjct: 303 MLQVTRIWNSVSAVSFMRRGIALARDYARRRVAFEAPLNRQPLHTETLATLQAEFEGAFH 362

Query: 372 LSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           LSF  A      +   +   +    R++  ITK    + A  V++E +E  GG+GY+E+ 
Sbjct: 363 LSFLTAGLLGAEEAGTADKRQQHLLRVLTSITKLTTGRQAVDVMSEVIEAFGGAGYVEDT 422

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGT--NLFEQLFSTL-----EQDLGSSGK 481
            +    R++    I  G+ N + LD L  L +    +    L + L     + DL ++G 
Sbjct: 423 GLPALLRDAHVLPIWEGTTNVLALDTLRALAQPGTWDAIRDLAAELTSGSSDSDLAAAGF 482

Query: 482 KVITILRDSISLCKEDKGL------ARFLTEKIALASSAAALYRAGMNDIAD 527
           +    L  +     E +        AR L   I  +   A L       +A+
Sbjct: 483 RARAALDHAYRWFSETRDRERLERGARRLALTIGRSLELALLVSHAAWSLAE 534


>gi|150016905|ref|YP_001309159.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149903370|gb|ABR34203.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +     +    + + F        ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVEKMAKLKMMGIPFFKEFGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    T      + P + S                    GLTE   
Sbjct: 84  GVILSAHTSLCASVINENGTNEQRAKYLPDLCSG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++  +++ FI+ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTTAVLEGDH-YVLNGSKIFITNGGVAETFIIFAMTDKSQGTKGISAFIVEKL 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIM 323
             G    +L+NK+G R+++T EL   N        L     G    MK L    +  A  
Sbjct: 190 FPGFSIGKLENKMGIRASSTTELVMENCIVPKENLLSKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +  EA++Y + R   G  L     ++  IA++ + I AA  L +  A      
Sbjct: 250 ALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKYLVYLAATKKQAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S +AA A       K +   +A  V  +A++  GG GY +E  + R  R++    I 
Sbjct: 310 EPYSVDAARA-------KLFAADVAMEVTTKAVQIFGGYGYTKEYPVERMMRDAKICEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTSEVQKMVIAGSILR 379


>gi|254494954|ref|ZP_01052777.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|213690536|gb|EAQ42205.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 403

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER +K EF      L+R+    G    + D  +        ++ +    L  +    +  
Sbjct: 53  ERDNKQEFP---QELVRKMGDLGFMGIMVDPKYGGSGMDTISYVLVMEELSKIDASASVM 109

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   +      +    T    + +  K+ + E                   L+E   G+D
Sbjct: 110 VSVNNSLVCYGLEAYGTEEQKQKYLTKLATGEQ-------------IGAFCLSEPEAGSD 156

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +      D         W  +   SD ++++AQ +   G   +   + +    G 
Sbjct: 157 ATSQATTAIDKGDHYVINGTKNWITNGGRSDVYLVIAQTDREKGHRGINAFIVERGMEGF 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G R + T  L+F++        +     G    MK L    +  A  ++  
Sbjct: 217 DIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 276

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A+ Y++ R   G  + +   +   +AD+  +I AA  L  + A   D  ++  
Sbjct: 277 ASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYTEIEAARMLVMKAAWQKDRKENYD 336

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A A       K +  K+A     EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 337 MASAMA-------KLYASKVAMEQTVEAVQIHGGNGFVKEYHVERLMRDAKITQIYEGTS 389

Query: 448 NAMVLDVLNLLEKG 461
               + +   + KG
Sbjct: 390 EIQKIVISRGVIKG 403


>gi|160942851|ref|ZP_02090091.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445903|gb|EDP22906.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii
           M21/2]
          Length = 637

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 80/479 (16%), Positives = 164/479 (34%), Gaps = 61/479 (12%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +  H+EL            + LA + + N                 EF       +++  
Sbjct: 6   TAAHEELRAKIRSFAEEEIKPLAFLMDQNN----------------EFPE---EAVKKLG 46

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPRV 170
             G     + + +            A           G ++S  V+     +    T   
Sbjct: 47  KLGWMGIPYPKEYGGAGLDALSYAIAVEELARVDGGTGVILSAHVSLGSWPIFAYGTEEQ 106

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K +               P+ K       GLTE   G+D     +      D      G
Sbjct: 107 KKKYL-------------VPLAKGEKIGAFGLTETNAGSDAGGTETTALDKGDYYLLNGG 153

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  ++P +D +++ A     +G   +   + +    G  +    +K+G RS++T EL 
Sbjct: 154 KIFITNAPKADTYVVFAVTTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELI 213

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           F+N         N+     E  KI +  LD   + ++   + +A+     A+ Y++ R  
Sbjct: 214 FNNVKVP---KENLLGKEGEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQ 270

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +  Q  +   +AD+A  +  A  L +  A   ++      E+A A++       + 
Sbjct: 271 FGKPIAAQQSIAFKLADMATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YA 323

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             +A  V  +A++  GGSGY++   + R YR++   ++  G+     + + +        
Sbjct: 324 SDIALEVTNDALQIHGGSGYLKGMEVERAYRDAKITTLYEGTNEIQRVVIASH------- 376

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523
              L   L +  G   +           + K+         +++A   +A  L + G +
Sbjct: 377 ---LLGRLGKSSGGESRSAAKKPAPITGIRKKTIFREGDAAQQVADLVAA--LKKDGHD 430


>gi|167585485|ref|ZP_02377873.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 595

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 180/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ D + 
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVSDFVE 477

Query: 493 LCKEDKGLARFL 504
                  ++ F+
Sbjct: 478 AEGVKPEMSEFI 489


>gi|116694047|ref|YP_728258.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528546|emb|CAJ94893.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 598

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 137/545 (25%), Positives = 225/545 (41%), Gaps = 33/545 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTP 82
            P   G + +++D  L AL+  +        +   LE +G         ELA +A+ + P
Sbjct: 24  VPDRQGGSLFAADPDLRALLPLYLPPDLFNHLLPHLERMGALAGG-VLDELAGVADRHPP 82

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L      G    +++ HPA+  + R +  + GL  +          +      + A  Y
Sbjct: 83  ELTYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRGGVLGWDKPMPPAAKYALTY 142

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G     S+T +    L     P +   + P + ++ +D   +  M        
Sbjct: 143 LFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRYLPNLTTQVFDDLYQGAMF------- 195

Query: 200 LGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--- 254
             +TE+  G+D+AA  ++  + +  +G + L G KWF S+P +   ++LA+VE   G   
Sbjct: 196 --MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPDAALAMVLARVEDEAGNAV 253

Query: 255 -------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                   FL+PR L DGS N     RLK+K+G RS A+ E+       +L+G+      
Sbjct: 254 PGHKGVSLFLLPRKLADGSDNHYRIIRLKDKLGTRSMASGEIRLEGAHAWLVGEPGRGFV 313

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + DM     L + + +   MR +L E +  AR R   G  L D P+M+R +  + L   
Sbjct: 314 QMADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRLQDMPLMRRQLLKLTLPTE 373

Query: 368 AATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  + F+ A +   A +   +A    RI+ P+ K+  C+ A  V  +AME  GG GYIE
Sbjct: 374 QARTMVFQTAEALRRADAGEADAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCGYIE 433

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVI 484
           E S  R  R++   SI  G+ N + LDVL  + +   L   +   + L  D         
Sbjct: 434 EWSDPRLVRDAHLGSIWEGTSNIVALDVLRAVRREGALPVLQAHLAGLLADTPMHAAARA 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              R   +        A    +   LA  AA+      + +A  +   R           
Sbjct: 494 VFERAIAAAANLAAQAAEAGADGELLARQAASALYHVTSAVAMAWEAGRIGSVRRMRLAQ 553

Query: 545 LHGRF 549
           L  R 
Sbjct: 554 LVLRH 558


>gi|238028608|ref|YP_002912839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           glumae BGR1]
 gi|237877802|gb|ACR30135.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1]
          Length = 595

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 102/490 (20%), Positives = 183/490 (37%), Gaps = 71/490 (14%)

Query: 55  HKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERW--DKVEFHP-AWHALLRRS 110
           H +L+      ++   +E  +  A    P        G ++  D V   P  +    R+ 
Sbjct: 31  HADLD---ADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYQGDGVVTTPTGFKDAYRQY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTP 168
           I  G      D  +          +  A   +M        M P ++  +   L     P
Sbjct: 88  IDAGWPALGCDPEYGGQGLPAF--VNNALYEMMNSANQAWTMYPGLSHGAYECLHAHGAP 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + PK+ S E+  T             + LTE   GTD+  + ++ + I DG Y +
Sbjct: 146 ELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPIGDGAYSI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCY 272
           SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+  
Sbjct: 193 SGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIKC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+ 
Sbjct: 253 GSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             ++ YA+ R                  +I  P ++R +         A A ++  A   
Sbjct: 313 QNSLAYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQI 372

Query: 381 DEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D+  S  +E      A    ++ PI K +    A      AM+  GG G+I E  + ++ 
Sbjct: 373 DKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQYV 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++  N I  G+ +   LD+L     G             D+G+  KK   I+ + +   
Sbjct: 433 RDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGAIVTEFVESE 479

Query: 495 KEDKGLARFL 504
                +A F+
Sbjct: 480 GVKPEMAEFI 489


>gi|110681102|ref|YP_684109.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans
           OCh 114]
 gi|109457218|gb|ABG33423.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans
           OCh 114]
          Length = 593

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 102/537 (18%), Positives = 193/537 (35%), Gaps = 73/537 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           E L     S   +E  ++A      L+      G   +   V     + A   +    G 
Sbjct: 30  EDLEADFTSAILEEAGKLATSVLAPLNTVGDTEGCTLENGVVRTPTGFKAAFDQIREGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +               ++  + +        +  +AS +    +    + + 
Sbjct: 90  PGLDMPEEYGGQNMPCVIGTAVGEMFSSSNMAFTMYHGLTHGAASAILAHGSQAQKETYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + S E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+
Sbjct: 150 PNMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       V  F+VP+ L       G  NG+   +++ K+
Sbjct: 197 SAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGTLGERNGVSVGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + +    G+LLG+ +     +  M     L   +  +S    +   A+ YA
Sbjct: 257 GIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               LI  P ++R++ D    +  A A     A   D A   
Sbjct: 317 KDRLQ-GRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRS 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +       +  +A +  GG GYIEE  +++  R++    I  
Sbjct: 376 HDKDADGLVSLLTPVIKGFLTDQGYDMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-CKEDKGLARF 503
           G+     LD++                L QD G        +++  I     +D    R 
Sbjct: 436 GANGVQALDLVG-------------RKLAQDGGKHVMAFFDLVKTFIKDNAGQDAEYDRA 482

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
             E   L +++  L  AGM      F++N       + +  L G ++  H+   + L
Sbjct: 483 FLEP--LKAASKDLQAAGM-----YFMQN----GMKNPNNALSGSYDFMHMFGHVCL 528


>gi|296127050|ref|YP_003634302.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
 gi|296018866|gb|ADG72103.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM
           12563]
          Length = 641

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 149/402 (37%), Gaps = 42/402 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    +  A      TP  H +   G+         A   L +      +    ++  + 
Sbjct: 11  LRAKIRAWAEEV--VTPIAHEHDQTGK-----FPTEAVKQLGK--AKLDIMGLPFETKYG 61

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A+ I    L  +       L +     +  +    T    K +          
Sbjct: 62  GAGFDNIAYAIAVEELSRVDGSMGVILSAHCSLGSYPIYAFGTEEQKKKYL--------- 112

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAF 243
                P+ +       GLTE   G+D     +  +   D  Y L+G K F+++ + ++ +
Sbjct: 113 ----TPLAEGKKIGAFGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAETY 167

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A     +G   +   + +    G  +    +K+G R++AT +L F N         N
Sbjct: 168 VVFAVTTPGIGTRGISAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNVKVP---KEN 224

Query: 304 VSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
           +     +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +  
Sbjct: 225 LLGKEGQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAF 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L +  A   D  +    E+A A       K +  ++   V+ +A++
Sbjct: 285 KLADMATKLRAARLLIYSAAAKKDRHEPYGTESAMA-------KLYASEIGLEVVNQALQ 337

Query: 418 CIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+GYI+    + R YR++   +I  G+     + +   +
Sbjct: 338 IHGGNGYIKGAYIVERAYRDAKICTIYEGTSEIQKVVIAASI 379


>gi|172061680|ref|YP_001809332.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171994197|gb|ACB65116.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 595

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 98/492 (19%), Positives = 179/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           R+ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  RQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+L+G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFAE 477

Query: 493 LCKEDKGLARFL 504
                  +A F+
Sbjct: 478 AEGVKPEMAEFI 489


>gi|317130792|ref|YP_004097074.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475740|gb|ADU32343.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 383

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
           A+++     GL                   I A           G ++S   +   + + 
Sbjct: 40  AIVKEMGQLGLMGIPIPEELGGSGMDFRSYIVAIHELAKVSATVGVILSVHTSVGTNPIV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  + +  K+ + E+                  LTE   G+D A I ++  K  D
Sbjct: 100 SFGTEKQKERFVNKLATGEF-------------LGAFALTEPSAGSDAANIKTRAVKKGD 146

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++  ++D +I+ A+    +G   V   + + +  GL     + K+G  
Sbjct: 147 -QYILNGEKVFITNAGVADTYIVFAKTNPNLGSKGVTAFIVEKNTPGLFIGTKEKKMGLH 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI----- 336
            + T+ + F +         N      E  KI L  L+   + ++   + +AEA      
Sbjct: 206 GSNTMPIHFDDAIVPA---ENRLGEEGEGFKIALANLNVGRIGIAAQALGIAEAALEQAT 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA+ R   G  +  Q  +   +AD+A  + AA  L++R A   +  K   +E       
Sbjct: 263 NYAKERKQFGKTIGSQQAIALKLADMATKVEAAKLLTYRAAYLHEHRKPCEKE------- 315

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++K +   +A     EA++  GG GY E   + R +R++    I  G+     + +  
Sbjct: 316 VSMSKSYASTIAMEAATEAIQVFGGYGYTEAYPVERFFRDAKVTQIYEGTNEIQRIVISK 375

Query: 457 LLEK 460
            L +
Sbjct: 376 QLLQ 379


>gi|308475057|ref|XP_003099748.1| CRE-ACDH-3 protein [Caenorhabditis remanei]
 gi|308266403|gb|EFP10356.1| CRE-ACDH-3 protein [Caenorhabditis remanei]
          Length = 424

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 26/306 (8%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++  +      + + PKI               T       L+E   G+D  A+ +  
Sbjct: 133 APLIIQLGNEEQKQKYLPKIV--------------TEAIGSFALSETGSGSDAFALKTTA 178

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D         W  ++  +  F++ A  E   G   +   L D +  G+   + ++K
Sbjct: 179 KKDGDDFVISGSKMWITNAGHAQFFLVFANAEPGKGYKGITCFLVDRNQEGVSVGKKEDK 238

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-- 336
           +G R+++T  + F N        L            +  L++  + +    + LA+    
Sbjct: 239 LGIRASSTCSVHFDNVRVHKSAILGEYGKGTSYKYAIECLNAGRIGIGAQMLGLAQGCFD 298

Query: 337 ---HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y ++R   G  LID   M+  I  + ++I AA  L +  A   +       EAA A
Sbjct: 299 QTIPYLQQREQFGKRLIDFQGMQHQIGQVRMEIEAARLLVYNAARMKENGIPFVREAAMA 358

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  ++A    +  +E +GG G+ +E  + + YR+S   +I  G+ N  +  
Sbjct: 359 -------KLFASQVATTATSRCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNT 411

Query: 454 VLNLLE 459
           +  L++
Sbjct: 412 IAKLVD 417


>gi|83859544|ref|ZP_00953064.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851903|gb|EAP89757.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 388

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 137/375 (36%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G+RW+K         +  ++  +GL C      +        H            ++ 
Sbjct: 36  PHGDRWEKEGMVD--REVWNKAGENGLLCPAAPEEYGGAGGDWRHDYAFHMAISEMGVDG 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +   A  V    T    K   PK+ S EY                + +TE   G
Sbjct: 94  WGASLHNSIVAPYVWHYGTEEQKKRILPKLISGEY-------------VGAIAMTEPGAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP- 267
           +D+  I +   K  +G        +  +   ++  +++A+ + + G       L +    
Sbjct: 141 SDLQGIKTTAVKDGNGYKINGSKTFITNGGTANFIVVVAKTDPKGGAKGTSLFLVETDGL 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIM 323
           +G    R  +K+G +S  T EL F +        L      G  + M+ L    L  A+ 
Sbjct: 201 DGFRRGRNLDKVGMKSQDTAELFFEDMKVPAEALLGEAEGQGFFQLMEQLPQERLQIAVQ 260

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V  M+ +LAE I Y + R   G  ++     +  +A++      A       ++   + 
Sbjct: 261 AVGMMKRALAETIAYVKERQAFGKPVMGFQNTQFKLAELKSKATIAEVFVQHCSDLLIKG 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  A+ A       KYW   +   +I E ++  GG G++ E  IAR +R+S    I 
Sbjct: 321 QLDAATASMA-------KYWTTDIQCELIDECVQLHGGYGFMNEYPIARMWRDSRVQRIY 373

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M L +   L
Sbjct: 374 GGTNEIMKLLIARTL 388


>gi|298207904|ref|YP_003716083.1| butyryl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83850545|gb|EAP88413.1| butyryl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 380

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 130/378 (34%), Gaps = 37/378 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER +K EF       +++    G    + D  +             + + +M +L     
Sbjct: 30  ERDNKQEFP---KEQVKKMGELGFLGMMVDPKYGGGGMDT-----VSYVLVMEELSKIDA 81

Query: 152 MSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + S         +         + +  K+ + E                   L+E 
Sbjct: 82  SCSVIVSVNNSLVCYGLQSYANEEQKEKYLTKLATGE-------------KLGAFCLSEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D  +  +      D         W  +   +D ++++AQ +   G   +   + + 
Sbjct: 129 EAGSDATSQRTTAIDKGDHYLLNGTKNWITNGGSADYYLVIAQTDKDKGHKGINAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAI 322
              G      ++K+G R + T  L F++        +     G    MK L    +  A 
Sbjct: 189 GWEGFEVGPKEDKLGIRGSDTHTLNFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +   A  Y++ R   G  +++   +   +AD+  +I AA  L  + A   D 
Sbjct: 249 QALGIASGAYELAKKYSKERETFGTKIMNHQAIAFKLADMHTEIEAARLLVMKAAKDKDN 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +    +A A       K +  ++A     EA++  GG+G+++E  + R  R++    I
Sbjct: 309 GDNYDLSSAMA-------KLYASRVAMETTVEAVQIHGGNGFVKEYHVERLMRDAKITQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + +
Sbjct: 362 YEGTSEIQKIVISRSILR 379


>gi|326799056|ref|YP_004316875.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326549820|gb|ADZ78205.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 382

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 110/292 (37%), Gaps = 10/292 (3%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
              K  S E       P+   +      L+E   G+D  +  +  +   D         W
Sbjct: 97  GLEKFGSEEQKEKYLKPLAAGTQIGAFCLSEPEAGSDATSQKTIAEDKGDYYLLNGTKNW 156

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +   +  ++++AQ    +G   +   + +    G      +NK+G R + T  L+FS+
Sbjct: 157 ITNGSNAAVYLVIAQTHPNLGHRGINAFIVEKDSPGFTIGPKENKLGIRGSDTHSLQFSD 216

Query: 294 TFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                   +     G    MK L    +  A  ++     +   A+ YA+ R   G  + 
Sbjct: 217 VKIPKENRIGADGFGFTFAMKTLEGGRIGIAAQALGIASGAYELALKYAKERTTFGKPIA 276

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  +AD+   I AA  L  + A   D+ +  +E AA       + K +    A  
Sbjct: 277 EHQAIQFKLADMYTQIEAARLLCLKAAWLKDQHQPYAEAAA-------VAKLFASDTAMR 329

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +  EA++  GG G+++E  + R  R++    I  G+     + +   + K  
Sbjct: 330 ITVEAVQIHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQRMVIARSILKEG 381


>gi|313886290|ref|ZP_07820016.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332299782|ref|YP_004441703.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
 gi|312924235|gb|EFR35018.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176845|gb|AEE12535.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
          Length = 379

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 137/384 (35%), Gaps = 42/384 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G+      + +              ++Y MA  E 
Sbjct: 26  PLAAEIDEQERFPI--ETVQKMSKLGIMGIPIPKEYGGAG-------STVQIYTMAVEEL 76

Query: 149 GHLMS--------PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             + +         +      +    T    + + PK+ S E+                 
Sbjct: 77  SRVCATTGVVVSAHTSLCCDPIMSFGTEEQKQHYLPKLASGEW-------------IGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
           GLTE   GTD +A  +      +  Y L+G+K F+++   +  +I+ A  +   G   + 
Sbjct: 124 GLTEPNAGTDASAQQTFAV-EEEECYILNGNKIFITNAEYAHVYIIFAMTDKSKGNKGIT 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             + +    G    + + K+G R +AT EL   N       LLG +              
Sbjct: 183 AFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRIPKDRLLGKVGGGFKVAMHTLDGG 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  ++   R ++ E + Y + R   G  +      +  +AD+   I  A+ L  R 
Sbjct: 243 RIGIAAQALGIARGAMDETVKYTKERKQFGRSIAKFQNTQFQLADLKARIDCASLLVRRA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D   S + EAA         K +C + A  +  +A++  GG GY  E  + R  R+
Sbjct: 303 AWCKDNGLSYNLEAA-------EAKLFCAETAMDMTTKAVQFHGGYGYTREYPVERMMRD 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 356 AKITEIYEGTSEVQRMVIAAHLLK 379


>gi|119896685|ref|YP_931898.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119669098|emb|CAL93011.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 377

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 141/394 (35%), Gaps = 27/394 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QEL R +     Q     P    WD+    P     L+     G    +    +      
Sbjct: 7   QELIRDSIRAFAQ-ERLAPFAAEWDRNHTFP--RQALKELAELGALGMVVPEEWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               + A             ++S   + A  + A   T    + W               
Sbjct: 64  YMSLVLALEEIAAGDGATSTIVSVQNSLACGIPAKYGTDAQKERWLK------------- 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D        ++  +   +D  I+ A  
Sbjct: 111 PLARGDMLGCFCLTEPHVGSDASALRTTAVRDGDDWVLNGVKQFITTGREADVAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGP 308
           +   G   +   +   +  G    R++ K+G +++ T ++ F N        L     G 
Sbjct: 171 DKAAGKKGISCFIVPTATPGYIVARIEEKMGQKASDTAQILFENCRVPADALLGAEGEGY 230

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L    +  A   +   R +L  A+ YA+ R   G  + +   +   +AD+A  +
Sbjct: 231 KIALSNLEAGRIGIASQCLGMARAALEAAVKYAQERETFGKPIFEHQAVNFRLADMATQL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D  +   +EA+ A       K +  +MA  V ++A++  GG GY+ 
Sbjct: 291 EAARQLVWHAASLKDAGRPCLKEASMA-------KLFASEMAEKVCSDAIQIHGGYGYVS 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  + R YR+     I  G+ +   L +   L +
Sbjct: 344 DFPVERIYRDVRVCQIYEGASDIQKLVIGRALAQ 377


>gi|312797296|ref|YP_004030218.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169071|emb|CBW76074.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 595

 Score =  293 bits (750), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 98/492 (19%), Positives = 185/492 (37%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   QE  +  +     L      G++       D V   P  +    
Sbjct: 31  HADLD---ADTINAVLQEAGKFCSE---VLFPLNQVGDQQGCTYVGDGVVTTPEGFKQAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D ++       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIEAGWPALGCDPAYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP + + + PK+ S ++  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 TPELQQRYLPKLVSGQWTGT-------------MCLTEPHCGTDLGILRTRAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            ++G K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SITGTKIFISSGEHDLADNIVHLVLARLPDAPAGTKGISLFIVPKFIPDDNGEPGQRNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   +  G+L+G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDDARGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YAR+R                  +I  P ++R +      + A  A ++  A 
Sbjct: 311 AYQNSLAYARQRLQMRSLSGPKAPDKAADPIIVHPDVRRMLLTQKAYVEAGRAFTYWAAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R + A    ++ P+ K +    A      AM+ +GG GYI E  I +
Sbjct: 371 QIDKELSHEDEAVRRDAADLVALLTPVIKAFLTDNAFEATNNAMQVLGGHGYIAEWGIEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+     LD+L     G             D+G+  KK   +++D + 
Sbjct: 431 YVRDARINMIYEGTNTIQSLDLLGRKVLG-------------DMGAKLKKFGKLVQDFVQ 477

Query: 493 LCKEDKGLARFL 504
               +  +  F+
Sbjct: 478 AEGINPDMQEFV 489


>gi|91225743|ref|ZP_01260772.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91189632|gb|EAS75907.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 384

 Score =  293 bits (750), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 89/400 (22%), Positives = 148/400 (37%), Gaps = 36/400 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +   + TAQ+ A              P    WD+ +  P    +LR +   G        
Sbjct: 9   QRAFADTAQQFADEC---------LAPMAAEWDEKQIFP--KDVLREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +           M        M+     + M+A   T      + PK+ + E
Sbjct: 58  AQGGLGLSRLDASIIFEQLAMGCTSTTAFMTIHNMVSWMIASFATDEAKTQFCPKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
           +                  LTE   G+D A++ +   K  D  Y L+G K F+S    +D
Sbjct: 118 W-------------LGSYCLTEPNAGSDAASLATTASKKGD-TYVLNGGKTFISGAGETD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        
Sbjct: 164 VLVVMART-GEAGAKGVSAFVIPAHADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G V  MK L    ++ A  SV   + +L  A  Y + R   G  L     ++  
Sbjct: 223 LGEEGQGFVFAMKGLDGGRINIATCSVGTAQQALERAARYIQERKQFGKSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  L    A+  D           A     + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQLVRYAASKLDRNDPD------ATAYCAMAKRFATDVGFQVCDQALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH+R+   + IL G+   M L +   L
Sbjct: 337 YGGYGYIKEYPMERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|255767530|ref|NP_390295.2| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321311896|ref|YP_004204183.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|251757487|sp|P45857|ACDB_BACSU RecName: Full=Acyl-CoA dehydrogenase
 gi|225185158|emb|CAB14346.2| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018170|gb|ADV93156.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
          Length = 379

 Score =  293 bits (750), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 131/364 (35%), Gaps = 26/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 37  FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + P + S ++                  LTE   G+D  ++ +   K  
Sbjct: 97  LYFGNEEQKMKYIPNLASGDH-------------LGAFALTEPHSGSDAGSLRTTAIKK- 142

Query: 223 DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G Y L+G K F+++  + D +I  A      G   +   + + +  G    + + K+G 
Sbjct: 143 NGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGL 202

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T EL F N        L     G    M  L    +  A  ++     +L  A+ Y
Sbjct: 203 YGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  +     +   +AD+A    AA  L +  A+  +   +  +EA+ A+    
Sbjct: 263 AKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQ--- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +    A     +A++  GG GY+++  + R  R++    I  G+     L +   L
Sbjct: 320 ----FASDAAVKAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYL 375

Query: 459 EKGT 462
             GT
Sbjct: 376 LGGT 379


>gi|323490855|ref|ZP_08096053.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323395463|gb|EGA88311.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 378

 Score =  293 bits (750), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 137/363 (37%), Gaps = 30/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
           A+L++    GL        +          I A      A    G ++S   +   + + 
Sbjct: 39  AILKKMGELGLMGITAPEKYGGSEMDFTSYITAIHELSKASGVIGVILSVHTSVGTNPIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + +  + + PK+ S EY                  LTE   G+D  ++ ++     +
Sbjct: 99  NFGSQQQIEKYVPKLASGEY-------------LGAFCLTEPAAGSDAGSLKTKAVLDGE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +D +I+ A  +   G   +   + +    GL   + + K+G   
Sbjct: 146 DYVINGSKVFITNGGAADTYIVFASTKPSAGSRGISAFIVEKDTPGLIIGKNEKKMGLHG 205

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIH 337
           + TV+L F N         N+     +   I +  L+   + ++   + +       A+ 
Sbjct: 206 SKTVQLTFDNMRVPA---ENLLGEENKGFSIAMANLNVGRIGIAAQALGIAEAAYEYAVA 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +  Q  +   +AD+A  + A+  L +  A+ + + K  ++EA+ A    
Sbjct: 263 YAKEREQFGKPIAHQQGVGFKLADMATQVEASKLLVYNAADLYSKGKDCNKEASMA---- 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     + +   
Sbjct: 319 ---KLFASKTAMDVTIEAIQVFGGYGYTKDYPVERLFRDAKVTEIYEGTSEIQRIVISKQ 375

Query: 458 LEK 460
           L K
Sbjct: 376 LTK 378


>gi|225867324|ref|YP_002752702.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|225786168|gb|ACO26385.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
          Length = 381

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 132/362 (36%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 43  KEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  K+ + EY                  LTE   G+D  ++ S+  K  
Sbjct: 103 LYFGTVEQKEKYVSKLATGEY-------------LGAFALTEPNAGSDAGSLKSRAVKKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +  +I+ A      G   +   + +    GL   + ++K+G  
Sbjct: 150 DHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLL 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F +         N+     +  K+ +  LD   + +    + +AE     AI
Sbjct: 210 GSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAI 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA+ R      +  Q  +   +AD+A  + AA  L +R A+   +     +E       
Sbjct: 267 NYAKEREQFEKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L +  
Sbjct: 320 ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISR 379

Query: 457 LL 458
            L
Sbjct: 380 AL 381


>gi|218295442|ref|ZP_03496255.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244074|gb|EED10600.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 381

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 147/397 (37%), Gaps = 27/397 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     ++    P    +D+ E  P    ++ +    GL  +I   
Sbjct: 4   DFSLTEEQKQLQALARRFAKEVIM--PVAREYDEKEEVP--WPIIEKLHEVGLLNAIIPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K   ++        A +    +   S    + V L  +      +        
Sbjct: 60  EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGSEEQKARFL------- 112

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 113 ------RPLTEKPALAAFALSEPGNGSDAAALKTRAVRQGDHYVLNGTKMWISNGGEAEW 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A +   +    V  L+ +    G    ++  K+G R++ T EL F +    +   L
Sbjct: 167 VVVFATLNPELRHKGVVALVVEKGTPGFRAVKIHGKMGQRASGTYELVFEDVKVPVENRL 226

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M+ L    +  A  SV   R +L EA  YA+ R   G  + +   ++  +
Sbjct: 227 GEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEAKKYAKEREAFGRPIAEFQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + I  A A ++  A   D+    +  +A       I K +  ++A     +A++  
Sbjct: 287 ADMLMGIETARAYTYYAAWLADQGLPHAHASA-------IAKAYASEVAFEAANQAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY+ E  + +  R+   N I  G+     L +  
Sbjct: 340 GGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIAR 376


>gi|313897821|ref|ZP_07831362.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2]
 gi|312957356|gb|EFR38983.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2]
          Length = 379

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 136/393 (34%), Gaps = 34/393 (8%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ- 131
            A  A      L          D+ E  P     + +     +    + R +        
Sbjct: 16  FAEFAEKEVKPL------AAEVDEDERFP--RENVEKMKACKMMGIPFSREYGGAGADYL 67

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           ++ +    L          L + +      +    T      + P + +           
Sbjct: 68  SYILAVEELSKKCGTTGVVLSAHTSLGTWPIEHFGTEEQKNKYLPDLCTG---------- 117

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250
                    GLTE   GTD A   +   K  D  Y L+G K F+++   +D +++ A  +
Sbjct: 118 ---KKLAAFGLTEPNAGTDAAGQQTTAVKDGDD-YILNGTKIFITNAGEADVYVIFAMTD 173

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
              G   +   + +    G    + + K+G R +AT EL F+N       LLG       
Sbjct: 174 KTKGTHGISAFIVEKGMPGFTVGQHEKKLGIRGSATSELIFNNVRLSKDHLLGQEGKGFK 233

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     +  A  ++   + ++ E + Y + R   G  +      +  +AD+ +   
Sbjct: 234 IAMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLADMQVKTD 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +  A   ++    S EAA A       K +  ++A  V  +A++ +GG GY  +
Sbjct: 294 AARWLVYDAAMKKEKGLPYSVEAAKA-------KLFAAEVAMEVTTKAIQLMGGYGYTRD 346

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R +R++    I  G+     + +   + K
Sbjct: 347 YPVERMFRDAKITEIYEGTSEVQRMVISGAMLK 379


>gi|289422724|ref|ZP_06424564.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156903|gb|EFD05528.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 380

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 75/361 (20%), Positives = 129/361 (35%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              L +       C I  R F        ++ I    L         +L + +   A  +
Sbjct: 40  KEFLDKLAKYKFICPIVPREFSGAGADYVSYAIIMEELSRADASSGTYLTAGASLVALPL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ + +     GLTE   G+D  A  +      
Sbjct: 100 INFGTKEQKEKYLK-------------PLAEGTKVGAFGLTEPGAGSDAGATATTAVLDG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++P  D  I+ A  E   G   +   + +    G  +   ++K+G R
Sbjct: 147 DHYILNGRKCWITNAPFCDFAIVTAVTEKGKGTKGISTFIVEAGWEGFSHGAHEDKMGIR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHYA 339
              T +L F N        L         M        +  A  +V   + +L EAI Y 
Sbjct: 207 GTRTSDLIFENVKVPKDNLLGKEGKGFVVMMNTLEAGRIGVAAQAVGVAQSALDEAIKYT 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L      +  IAD+A  + AA  L ++ A   D+ KS +  ++ A      
Sbjct: 267 KERVQFGKPLSAFQNTQFTIADMATKVEAARLLVYQAAQLKDDGKSPAIASSMA------ 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K++  ++A  V  +A++  GG GY+++  I R YR++   SI  G+     + +   L 
Sbjct: 321 -KFYAAEVANEVAYKALQLHGGYGYVKDYRIERIYRDARILSIYEGTSQVQQIVIAGKLL 379

Query: 460 K 460
           K
Sbjct: 380 K 380


>gi|71082955|ref|YP_265674.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762621|ref|ZP_01264586.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
 gi|71062068|gb|AAZ21071.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718423|gb|EAS85073.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 587

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 96/502 (19%), Positives = 197/502 (39%), Gaps = 63/502 (12%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
              LA+  + N   L      G     V   P +     + I DG      D  +     
Sbjct: 53  ILPLAKSGDENPTVLE----NGV----VRTPPGYKEAYSKYIEDGWTSLSCDPKYGGQGM 104

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +        +   A L        S+ + + ++   T  + + + PK+   ++  T   
Sbjct: 105 PKTVSAFFDEMLSSASLSFKLYSELSIGAYNCISHHATDEIKEKYLPKMVEGKWSGT--- 161

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + LTE   GTD+  + ++  + SDG + LSG K F++S   D       +
Sbjct: 162 ----------MCLTEPVCGTDLGLLKTKAIEQSDGTFKLSGQKIFITSGDQDLTENIIHL 211

Query: 245 MLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           ++A+          +  FLVP+ L +     G+ NG+    +++K+G + +AT  L F +
Sbjct: 212 VIARAADSPAGTKGISLFLVPKFLVNEDGSIGARNGVSTGSIESKMGIKGSATCVLNFDD 271

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+++G  N     +  M  L  +   I  +    ++   ++ YA+ R   G       
Sbjct: 272 ATGYMIGLKNKGLNAMFTMMNLERIVVGIQGLGISEIAYQNSLSYAKERKQ-GKTNNTKS 330

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANS------FDEAKSRSEEAAYARIM 396
                 +I+   +++++ ++   I    AL F L+          + K + E +    +M
Sbjct: 331 TNGADFIIEHADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDEKIKQEASDLVSLM 390

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDV 454
            P+ K     M   + +EAM+  GG GY +++ I + YR++    I  G+ +     L  
Sbjct: 391 TPVVKTMFSDMGMEITSEAMQVHGGYGYTKDQGIEQLYRDNRITPIYEGTNSIQAADLVF 450

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI------ 508
             L+ K  ++ ++    ++ D  +  +K+   +++  +  +       ++ EK+      
Sbjct: 451 RKLVNKNGDIIDKYLELIKNDCSTENEKLKPFIKELKTHLEILSTFTDWIKEKVQNSKDD 510

Query: 509 ALASSAAALYRAGMNDIADVFL 530
           A A+    L   G   IA  ++
Sbjct: 511 ASAACNDYLKALGFVSIAHSWI 532


>gi|261251343|ref|ZP_05943917.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP
           102891]
 gi|260938216|gb|EEX94204.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP
           102891]
          Length = 384

 Score =  292 bits (749), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 150/382 (39%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E WD+ +  P    ++R +   G            +   +           M     
Sbjct: 26  PMAEEWDQKQIFP--KEVIREAGELGFLSLYTPEEQGGLGLPRLDASIIFEQLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+     + MVA   +    + +  K+ + E+                  LTE   G
Sbjct: 84  TAFMTIHNMVSWMVASFASETARQTYCEKLITGEW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ +  Q++ DG Y ++G K F+S    +D  +++A+     G   +   +   + 
Sbjct: 131 SDAAALVTSAQQVDDG-YLINGSKVFISGAGETDVLVVMARTSDD-GAKGISAFVVPATA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G+ Y R + K+G  S  T  + F N        L     G V  MK L    ++ A  S
Sbjct: 189 QGISYGRKEPKMGWNSQPTRSINFDNVKIPKDHLLGEEGQGFVFAMKGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L +A  Y + R   G  +     ++  +AD+A ++ AA  L    A+  D   
Sbjct: 249 IGTAQQALNQATQYLKERKQFGKPIAQFQALQFKLADMATELVAARHLVRLAASKLDSGD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +       A     + K +   +   V  +A++  GG GYI+E  + R++R+   + IL 
Sbjct: 309 TE------ATAYCAMAKRFATDVGFKVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILE 362

Query: 445 GSGNAMVLDVL-NLLEKGTNLF 465
           G+   M + +   LL +G  +F
Sbjct: 363 GTNEIMRVIIARRLLAEGAQIF 384


>gi|260803587|ref|XP_002596671.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae]
 gi|229281930|gb|EEN52683.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae]
          Length = 632

 Score =  292 bits (749), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 120/531 (22%), Positives = 207/531 (38%), Gaps = 53/531 (9%)

Query: 35  NAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y  D  L + +           +  +L+  G  V +    +L R    N P L  Y  
Sbjct: 68  NLYLEDVTLRSYLKRVMPKEVLQAITPDLKQFGHRVATD-IGDLGRECELNPPYLQQYDA 126

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V    AW  L   S  +G+    ++R F    R      + A+L++       
Sbjct: 127 WGRRTDEVVTCQAWRTLHDISAQEGIIAIPYEREFGQWSR----LYQVAKLHMFNPASGL 182

Query: 150 HLMSPSVTSASMVALMTTPR--VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    ++T  +     +T    + +   P + SR                 G  +TE+RG
Sbjct: 183 YSCPLAMTDGATKVAESTGDSVLMQTAFPHLVSRN---------PAQFWTSGQWMTERRG 233

Query: 208 GTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CFLVPRL 261
           G+D+A    +      DG + L G+KWF S+  +D  + LA+V    G        +   
Sbjct: 234 GSDVANGTETVAVPQEDGTHRLYGYKWFSSATDADMTLTLARVMDSSGEVVQGTRGLSLF 293

Query: 262 -LEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            LE    +G    +  QRLKNK+G R   T EL         + D       + DM  + 
Sbjct: 294 YLETRDSSGQLNNIQVQRLKNKLGTRQLPTGELLLDGAVAHKVSDDGRGVAAIADMLTIT 353

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + +++M+   MR  L  A  Y+ RR V G ++ + P+  + +A +  +   AT L   +
Sbjct: 354 RIHNSLMASGCMRRLLNLARDYSTRRRVFGKLICEHPLHMQTLARLETETRGATLLVLEV 413

Query: 377 ANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                  D   +  ++    R++ P+TK +  K A A+ +E +E  GG GYIE+  +   
Sbjct: 414 GRLLGLQDCKMASEQDELMLRLITPLTKLYTAKQAVALCSEGLESFGGQGYIEDTGLPTF 473

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLGSSGKKVI-------- 484
            R++   SI  G+ N +  DVL  L K    + +  +S +   L  +  K          
Sbjct: 474 LRDAQVLSIWEGTTNVLSHDVLRSLVKTKGAVLQAFYSDVTTRLKQAAAKDTLRPSCQVV 533

Query: 485 -TILRDSISLCK--------EDKGLARFLTEKIALASSAAALYRAGMNDIA 526
            + L+ ++   +          +  AR  +  +A       +      D A
Sbjct: 534 ESALQKTVGFAQKAASQDPGTLEVAARDFSYSLARIYIGTLMLEHASWDQA 584


>gi|320335137|ref|YP_004171848.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756426|gb|ADV68183.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 379

 Score =  292 bits (749), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 143/395 (36%), Gaps = 30/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q+LAR    N        P    +D+ E  P    ++ ++   GL           + 
Sbjct: 12  QLQQLARDFTRNE-----IIPIASEYDQKEELP--WQIVEKAHEVGLLNMSVPEHAGGLG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                +           +    ++  S    + + +  T    K +              
Sbjct: 65  LGMVDEAIIGEELAYGCMGIYTILMASELGITPILVGGTEEQQKRFL------------- 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP+ +        L+E   G+D AA+ +      D         W  +  ++D  ++ A 
Sbjct: 112 APLVEKPALAAFALSEPNNGSDAAAMGTTAVLDGDEWVINGTKMWISNGGVADITVVFAT 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTG 307
            +   G      ++      G  Y ++K+K+G R++ T EL F N        L  +  G
Sbjct: 172 TDKNGGHKATVAIVVPKDAPGQSYNKIKHKLGQRASLTSELVFDNVRVPKDHILGGIGDG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               MK L    +  A  SV   R ++ E+I YA+ R   G  +     ++  +A++A+ 
Sbjct: 232 FKIAMKTLDKTRIPVAAGSVGVARRAMEESIKYAKERAAFGKPIATFQAIQFKLAEMAMG 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I     +S + A   D+      E+A       I K +C +MA     EA++  GG GY+
Sbjct: 292 IETGRLMSLKAAWLVDQGLPHGYESA-------IAKAYCSEMAFNAANEAIQVHGGYGYV 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            E  + +  R+   N I  G+     + +   L K
Sbjct: 345 GEYPVEKLLRDVKLNQIYEGTNEIQRVVISRNLLK 379


>gi|226323698|ref|ZP_03799216.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758]
 gi|225207882|gb|EEG90236.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758]
          Length = 383

 Score =  292 bits (749), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 142/384 (36%), Gaps = 38/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P   A + +    G       + +E        + +    L  +    
Sbjct: 26  PLAQEVDETEVFP--RATVEKMAKYGFLGIPVPKEYEGQGCDPLTYVMCVEELAKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      +    TP     + P + S                    GLTE   
Sbjct: 84  SVIVSAHTSLCIDPILTYGTPEQKAKYVPDLASG-------------RKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLL 262
           GTD     ++     D  + L+G K F+++   +D +I++A      +       +   +
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKEADVYIIIAVTGIVEKRGRKMKEISAFI 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD  
Sbjct: 190 VEKDTPGFTFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGAQGKGFGIAMHTLDGG 246

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      I Y + R   G  +      +  +AD+A  + AA  + ++ 
Sbjct: 247 RIGIAAQALGIAEGALDRTIAYVKERKQFGRTIGQFQNTQFQLADMATKVEAAKMMVYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +    K  S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R+
Sbjct: 307 AMAKATQKVYSVEAAQA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMRD 359

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 360 AKITEIYEGTSEVQRMVISGNLLK 383


>gi|296333431|ref|ZP_06875884.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675063|ref|YP_003866735.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149629|gb|EFG90525.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413307|gb|ADM38426.1| short chain acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 379

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 135/362 (37%), Gaps = 32/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L+++    GL        +        ++ +    +  ++      L   +    + + 
Sbjct: 38  QLIKKMGEHGLMGIPVPERYGGAGADVVSYILAIHEISKISAAVGVILSVHTSVGTNPIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ S ++                  LTE   G+D  ++ +   K  +
Sbjct: 98  YFGNEEQKMKYIPKLASGDH-------------LGAFALTEPHSGSDAGSLRTTAIKK-N 143

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F+++  + D +I  A      G   +   + + +  G    + + K+G  
Sbjct: 144 GKYVLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGLY 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
            + T EL F +       + N+     +   I +  L+   + ++   + +AE     A+
Sbjct: 204 GSNTTELIFDDAEVP---EENLLGKEGDGFNIAMANLNVGRIGIAAQALGIAEAALEHAV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++R   G  +     +   +AD+A    AA  L +  A+  +   +  +EA+ A+  
Sbjct: 261 AYAKQRMQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLACGKEASMAKQ- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +    A     +A++  GG GY+++  + R  R++    I  G+     L +  
Sbjct: 320 ------FASDSAVRAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISK 373

Query: 457 LL 458
            L
Sbjct: 374 HL 375


>gi|320352863|ref|YP_004194202.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032]
 gi|320121365|gb|ADW16911.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032]
          Length = 381

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 142/400 (35%), Gaps = 33/400 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q L R    +  +        ER +   F  A   +  R    GL   ++   +    
Sbjct: 7   EEQNLIRDMVRSFAETEVASSAAERDENERFDRA--LMFDRLAELGLTGIVFPEEYGGAG 64

Query: 129 RKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               ++ I    L  +       L +     A+ + +  T    + +             
Sbjct: 65  ADYISYAIAVEELSRVCGSTGVTLSAHLSLCANPIYMFGTEAQKQKFL------------ 112

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+ K     G GLTE   G+D     +   +  +         +  ++  ++ +++LA
Sbjct: 113 -VPLAKGEKIGGFGLTEPSAGSDAGGTKTTATRDGNDWILNGSKIFITNAGEAETYVVLA 171

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +        +   + +    G  + + + K+G RS+ T+EL F N     +   N+  
Sbjct: 172 RSDKNAEKHRGISAFIVEKGTPGFSFGKKEKKMGIRSSPTMELVFENCR---IPGDNLLG 228

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
              +  K+ +  LD   + ++   + +A+     A+ Y + R      +     +   +A
Sbjct: 229 QEGQGFKVAMKTLDGGRIGIAAQALGIAQGALDAALAYTKEREQFNKPIASFQGVSFQLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L +  A       S S E+A A       K +  + A  V  +A++  G
Sbjct: 289 DMATQVEAARLLIYNAAYRASNGLSYSLESAMA-------KLFASETAMRVTTQAVQLHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY  E  + R  R++    I  G+     + +   L +
Sbjct: 342 GYGYTREFPVERMMRDAKITEIYEGTSEVQRVVIGAALTR 381


>gi|218282346|ref|ZP_03488628.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989]
 gi|218216632|gb|EEC90170.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989]
          Length = 379

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 129/378 (34%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEA 148
                D+ E  P     +       +    + R +         + +    L        
Sbjct: 27  NAADVDENERFP--KESVEVMRQAKMLGIPYSREYGGAGADYLCYILAIEELSKTCATSG 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L + +      +A   T    + +   + +                    GLTE   G
Sbjct: 85  VVLSAHTSLGTWPIAQFGTEEQKQRFLTDLCTG-------------KKLAAFGLTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD A   +      D         +  ++  +D +++ A  +   G   +   + +    
Sbjct: 132 TDAAGQQTTAVLDGDEYVINGTKIFITNAGEADVYVIFAMTDKTKGTRGISAFILEKGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G  +   + K+G R +AT EL F+N     +   N+        KI +  LD   + ++ 
Sbjct: 192 GFTFGLHEKKLGIRGSATCELIFNNVR---IPKENLLGKEGMGFKIAMQTLDGGRIGIAA 248

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A     EA+ Y ++R   G  +      +  +AD+     AA  L +  A +  E
Sbjct: 249 QALGIAQGAIDEAVAYVKQRKQFGRPIAKFQNTQFQLADMQTKTDAARWLVYSAATAKQE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++       +A   K +  + A  +  +A++ +GG GY  +  + R +R++    I
Sbjct: 309 GRPYTQ-------LAAEAKLFAAETAMEITTKAIQLLGGYGYTRDLPVERMFRDAKITEI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + K
Sbjct: 362 YEGTSEVQRMVISGAMLK 379


>gi|325283339|ref|YP_004255880.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315148|gb|ADY26263.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 380

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 135/375 (36%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E +D+ E  P    +++++   GL           +      +           +  
Sbjct: 27  PVAEEYDRREEMP--WDVIKKAHEVGLLNVAVPEHAGGLGLGMVDECIIGEELAYGCMGM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  S    + + +  T    K +              +P+ +        L+E   G
Sbjct: 85  FTIMMASELGITPILVGGTEEQQKRFL-------------SPLVEKPALAAFALSEPNNG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + +      D         W  +   ++  ++ A  E   G      L+      
Sbjct: 132 SDAAGMHTTAVLDGDEWVINGTKMWISNGGEAEVTVVFATTERGAGHKATVALVVPKDAP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSV 325
           G  Y ++K+K+G R++ T EL F N        L  +  G    MK L    +  A  SV
Sbjct: 192 GFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLGDGFKIAMKTLDKTRIPVAAGSV 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L E++ Y++ R   G  +     ++  +AD+A+ I     +  + A   D+   
Sbjct: 252 GVARRALDESVKYSKEREAFGKPISSFQALQFKMADMAMGIETGRLMYLKAAWLVDQGLP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E+A       I K +C  MA     EA++  GG GY+ E  + +  R+   N I  G
Sbjct: 312 HGYESA-------IAKAYCSDMAFDAANEAIQIHGGYGYVGEYPVEKLLRDVKLNQIYEG 364

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L K
Sbjct: 365 TNEIQRVVISRSLLK 379


>gi|83949836|ref|ZP_00958569.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83837735|gb|EAP77031.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 591

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/547 (21%), Positives = 204/547 (37%), Gaps = 74/547 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDKVEFHP--AW 103
           +AN P+  + ELE       S   +E  ++A      L+A     G   +     P   +
Sbjct: 21  VANDPTPGYAELEP---DFTSAVLEEAGKIAGEVLHPLNAVGDQEGCVLENGVVRPPKGF 77

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    G         +               ++  A          +  +AS + 
Sbjct: 78  KEAFDQVREGGWTALDLPEQYGGQNMPYLLGTAVGEMFSGANQAFTMYQGLTHGAASAIL 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T +    + PK+FS ++  T             + LTE   GTD+  + S+     D
Sbjct: 138 VHGTDQQKDTYLPKMFSCDWTGT-------------MNLTEPHCGTDLGLMRSKAVPQDD 184

Query: 224 GIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSP 267
           G Y +SG K F+S+   D       ++LA++ G       V  F+VP+ L       G  
Sbjct: 185 GSYAISGQKIFISAGEHDMAENIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKEDGSLGER 244

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           NG+   +++ K+G   N+T  +++    G+LLG+ +     +  M     +   +  ++ 
Sbjct: 245 NGVKCSKIEEKMGIHGNSTCVMDYDGAKGWLLGEEHKGMRAMFTMMNEARIGVGMQGLAQ 304

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             V+   A+ YAR R                  LI  P ++R + D    I  A A    
Sbjct: 305 AEVAYQNALDYARDRLQGRSVTGVENPDGPADPLIVHPDIRRNLLDQKSFIEGARAFLLW 364

Query: 376 LANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A   D A+   +EAA     ++ P+ K +       +  +A +  GG GYIEE  +++ 
Sbjct: 365 GAQMIDRAERGKDEAAHGMVSLLTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEETGMSQF 424

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            R++    I  G+     LD++                L QD G        +++  I  
Sbjct: 425 TRDARIAMIYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLVKGFIKE 471

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
              D  +A F TE   L S++  L  AGM      F++N       + +  L G ++  H
Sbjct: 472 AGTDGAMAEF-TEP--LKSASKDLQSAGM-----FFMQN----GMKNPNAALAGSYDFMH 519

Query: 554 IIDSLYL 560
           +   + L
Sbjct: 520 LFGHVCL 526


>gi|254476560|ref|ZP_05089946.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
 gi|214030803|gb|EEB71638.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
          Length = 593

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/541 (19%), Positives = 193/541 (35%), Gaps = 78/541 (14%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIH 112
            ELE       S   +E  ++A      L+      G R +  V + P  + A   +   
Sbjct: 30  DELE---AEFTSAVLEEAGKIAGEVLHPLNTVGDTEGCRLENGVVYTPTGFKAAFEQVKE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G         +                +  A          +  +AS +    T     
Sbjct: 87  GGWTGLDMPEQYGGQNMPYVMGTAVGEFFSAANQAFTMYQGLTHGAASAILAHGTDAQKD 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K
Sbjct: 147 TFLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+SS   D       ++LA++ G       V  F+VP+ +       G  NG+   +++
Sbjct: 194 IFISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKDDGSLGDRNGVSVGKIE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   N+T  + + +  G+LLG  +     +  M     L   +  ++    +   A+
Sbjct: 254 EKMGIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNAL 313

Query: 337 HYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            YA+ R   G               LI  P ++R + D       A A     A   D+A
Sbjct: 314 EYAKDRLQ-GRDVTGAKNPEGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGAKMLDQA 372

Query: 384 KSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               ++ A     ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    
Sbjct: 373 HRSEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAM 432

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           I  G+     LD++   L + G       F  ++     +G       ++ I        
Sbjct: 433 IYEGANGVQALDLVGRKLAQDGGKHVMAFFEMIKNFCKENGDISDAYSKEFIE------- 485

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
                     L +++  L  AGM      F++N   +  H     L G ++  H+   + 
Sbjct: 486 ---------PLKAASKDLQAAGM-----YFMQNGMKNPNH----ALAGSYDFMHMFGHVC 527

Query: 560 L 560
           L
Sbjct: 528 L 528


>gi|310821595|ref|YP_003953953.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309394667|gb|ADO72126.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 149/395 (37%), Gaps = 34/395 (8%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           ++  TA+++AR      PQ  A         +  F PA   L +     GL        +
Sbjct: 11  LIRDTARKVAR--EKVEPQARAADR------EERFSPA---LFKELAEVGLMGVNLPARY 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                       A      A       M+ +     ++    T    + + P++ S E  
Sbjct: 60  GGSEAGVVAYALAVMELSAACASTSVAMAVTNMCGELINTFGTEAQREKFLPRLTSGE-- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                     +V     L+E   G+D  A+ +   +  D        +W  S   +   +
Sbjct: 118 ----------AVVGSFALSEAHAGSDPGALRTTAVRQGDQWVLNGSKQWITSGAYAGVMV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+  G  G   +   + +G   GL   + ++K+G R + TV L F +        L  
Sbjct: 168 VWARTSG-TGNKGLSAFIVEGGTKGLHVGKHEDKMGLRGSNTVSLTFEDCHIPADQILGK 226

Query: 305 STGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                +   + +    +  A  +    R +L  A+ Y + RH     + +    +  +AD
Sbjct: 227 EGEGFKLAMVALDGGRIGIASQACGVARAALEAAVRYTKDRHAFNQPVSEFQGPRFMMAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + IAAA  L+FR A   ++ +  + EA+ A       K +  +MA  V  +A++  GG
Sbjct: 287 MKVQIAAAELLTFRAATLKEKGQPFTREASMA-------KLFASEMANRVCDKAVQLHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GYI+E  + R+YR++   +I  G+     + +  
Sbjct: 340 YGYIDEFPVERYYRDARVQTIYEGTSEVQRMVIAR 374


>gi|159900904|ref|YP_001547151.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893943|gb|ABX07023.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 386

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 128/376 (34%), Gaps = 33/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ E  P     +R++ + GL    +   +         + I    +       
Sbjct: 24  PIAREVDEAERVP--FETIRKAGNLGLLGIPFPEEYGGADAGIVGYCILQEEINRYCAST 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      + L         +  K+              +  +     LTE   
Sbjct: 82  GTIIGAHAQLCGMSIFLSGNDEQKSRYLSKL-------------NEGKLLGAWALTEPNA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           G+D A+IT+   +  D      G  W  +   +D  ++ A      G    +   + +  
Sbjct: 129 GSDAASITTTATQDGDDWIINGGKMWITNGSFADVIVVFASTNRERGARGGISAFIVEKD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSV 325
             G    +++ K+G R++ T  + F N        L  +  G    MK    LD     +
Sbjct: 189 FAGFKVGKVEEKMGLRASHTASIFFENCRVPAKNVLGEIGAGFGVAMK---TLDIGRCGL 245

Query: 326 SGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +     +   A+HY+  R   G  + D   ++  +A++   I A   + +  A   
Sbjct: 246 GASALGSAKEAYDLALHYSVERQQFGRPIADFQAIQIKLAEMRTKIYAMEQMVYHCAALV 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K  + E++         K +C + A  +I EA++  GG G+  E  + R YR++   
Sbjct: 306 DAKKPATLESSM-------VKLFCTEAASQIIDEAIQIYGGMGFSREVPLERMYRDARVT 358

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+       +  
Sbjct: 359 RIFEGTNEIQKYVIAG 374


>gi|163796872|ref|ZP_02190829.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159177861|gb|EDP62410.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 390

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 149/401 (37%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     + ++      P     D+    P  H L R+    G+        +  
Sbjct: 12  DLGETADMMRDSVRSFAADEIAPRAADIDRENTFP--HDLWRKLGDLGVLGVTVGEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H +    +   +        + S    + + L  T    + + PK+ S E+  
Sbjct: 70  AGMGYLEHCVAMEEISRASASVGLSYGAHSNLCVNQIRLNGTDEQRQRFLPKLTSGEF-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D      G  W  + P +D  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMRTRAEKKGDRYIVNGGKMWITNGPTADVVVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPDANQHGITAFLIEKGMKGFSIAQKLDKLGMRGSDTGELVFEDVEVPEENVLGQI 236

Query: 306 TGPVEDMKILIYLDSAIMSV---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V+ +   +  + A+++      M+  +   I Y   R   G  + +  +M+  +AD+
Sbjct: 237 NGGVKVLMSGLDYERAVLAAGPTGIMQACMDVVIPYVHERKQFGRSIGEFQIMQGKLADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + AA +  + +A + D  +   ++AA A         +  + A  +  EA++C+GG+
Sbjct: 297 YVTMNAAKSYVYTVAKACDRGEVTRKDAAGA-------ILYAAEKATWMTLEAIQCLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GY  E    R  R++    I  G+     + +   L K T 
Sbjct: 350 GYTNEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFKETA 390


>gi|226227107|ref|YP_002761213.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226090298|dbj|BAH38743.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 405

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 81/422 (19%), Positives = 151/422 (35%), Gaps = 57/422 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             +    +  AR  ++  P   A+       D+    P     +++    GL    W   
Sbjct: 12  LAVRDMVRAFAR--DHVAPVAAAH-------DEASTFP--WENVKQMGELGLLGVPWSEE 60

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    +  I    L  +    +  + + +    S +    TP   + + P + S  
Sbjct: 61  VGGAGFDTLSFMISIEELAKVCASHSITISAHTTLGTSPIVKFGTPEQIQRYVPLLASG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD 241
                        V  G GLTE+  G+D     +   K  D  Y L+G K F++ + + +
Sbjct: 120 ------------KVLGGFGLTEEAAGSDAGGTRTTAVKQGD-RYILNGSKRFITHAGVGE 166

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGS--------------------PNGLCYQRLKNKIGN 281
            F++ A  +   G   +   +                          G    + ++K+G 
Sbjct: 167 IFVVTAVTDPSKGTKGISSFILTKDSVDLEACRVHGVGHDDSLVNMKGFTAGKKEDKMGW 226

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           R++ T EL F N        L     G    MK L    +  A +S+   + +L E++ Y
Sbjct: 227 RASDTRELLFDNVEVPAENLLGTEGLGFTNFMKTLDAGRIGIAALSIGIAQGALEESLKY 286

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +     ++  ++D+A +I A   L +  A         S+EAA A     
Sbjct: 287 ASVRKQFGSPISSFQGIQFQLSDMATEIEAGRHLMYHAAWLSQNGHPFSKEAAMA----- 341

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C ++A     +A++  GG GY ++  + R+ R++    I  G+     + +   L
Sbjct: 342 --KLFCSEVAMKATIKAIQVHGGYGYTKDYPVERYMRDAKICEIGEGTSEIQRMVIARHL 399

Query: 459 EK 460
            K
Sbjct: 400 LK 401


>gi|295400863|ref|ZP_06810839.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977126|gb|EFG52728.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 390

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 132/364 (36%), Gaps = 24/364 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++ ++   GL        +  +      K                L+       ++ + 
Sbjct: 40  KVVEKAKKMGLFGLSIPEEYGGLGLGMVGKCAIYEELGKTHNGFTTLIGAHTGIGTVGIV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            M      + + PK+ + E+                  LTE   G++   + +   +  D
Sbjct: 100 EMGNEEQKRRYLPKMATGEW-------------IGAFALTEPSAGSNATNLKTTAVRKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++  +  F ++A  +   G   +   + +    G    + + K+G R 
Sbjct: 147 RYIINGSKHYITNAKDAHVFTVMAVTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRG 206

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + + EL F +    +   L     G V  +KIL       A  ++   +  L +++ YA 
Sbjct: 207 SHSCELFFEDLEVPVENRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAM 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +I+Q  +   +AD+A++I     +++R+A   D+  +  +EAA         
Sbjct: 267 EREQFGKPIIEQQAILHMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAAM-------V 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  ++   V   A++  GG GYI E  I R YR++    I  G+       +   L K
Sbjct: 320 KLYGSEVYNRVADRAVQVHGGLGYIAEYPIERFYRDARITRIYEGTSEIQRNIIGAQLIK 379

Query: 461 GTNL 464
              L
Sbjct: 380 EYRL 383


>gi|171317326|ref|ZP_02906522.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097525|gb|EDT42363.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 595

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 179/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           R+ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  RQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFAE 477

Query: 493 LCKEDKGLARFL 504
                  +A F+
Sbjct: 478 AEGVKPEMAEFI 489


>gi|167619358|ref|ZP_02387989.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 593

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 141/517 (27%), Positives = 234/517 (45%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRA-SDELDRLASRADKNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++   ++  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +       G + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRETSADGAGTWRLFGDKWFCSNADADLAMVLARPEGAPDGVN 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLDTLDAARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  SA+ALY      I
Sbjct: 485 RALDRASDAIAHVAQTGDDAFVRQSASALY-HATTAI 520


>gi|162454035|ref|YP_001616402.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161164617|emb|CAN95922.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 562

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 126/535 (23%), Positives = 216/535 (40%), Gaps = 48/535 (8%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ-ELARM 76
            A  Q P  +G N Y  D +L + +A        + +   L  +GE       Q +LA  
Sbjct: 1   MAFYQDPPTLG-NQYDDDRVLRSYLARALPREVAASITPSLREMGELAGGRLYQLQLADR 59

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN   P+L ++   G R D VE    W    R +   G+  + ++R+     R      +
Sbjct: 60  ANE--PKLTSWDAWGRRIDHVEVTELWKEAARIACERGVVATAYERAHGAFSR----VHQ 113

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKT 194
            A  YL       +    ++T  +   L+ +    +     P++ SR+            
Sbjct: 114 FALAYLFDASSDVYTCPLAMTDGAARTLLASDNRALIDRAVPRLTSRD---------PAA 164

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--- 251
           +   G  +TE+ GG+D+    +  +   DG Y L G KWF SS  S+  + LA+ EG   
Sbjct: 165 AWTSGQWMTERTGGSDVGRSETAARLGPDGAYRLHGTKWFASSTTSEMALTLARPEGNPE 224

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  F V    E G   G+   RLK+K+G R   T EL         +  L+     
Sbjct: 225 GSRGLALFYVELAGEAGRREGVLINRLKDKLGTRKVPTAELTLDGVLATPVAGLSNGVRA 284

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  M  +    +AI +++GMR  LA A  YA+ R   G  L ++P+    +A++  +   
Sbjct: 285 IAPMLNVTRTWNAIGAIAGMRRGLALARSYAQSRVQFGTTLAEKPLHMDTLAELQAEFEG 344

Query: 369 ATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           A  L+FR        +       EA   R++ P+ K    K A +V++E +E  GG+GY+
Sbjct: 345 AFHLTFRAIELLGREETGSLTDSEAKLLRLIIPLAKLTTAKQAVSVLSEVLEAFGGAGYV 404

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--------------FEQLFST 471
           E+  + R  R++   +I  G+ N + LD L ++ K  +L               E   + 
Sbjct: 405 EDTGLPRLLRDAQVLTIWEGTTNVLALDALRVILKDGSLDILAAEVARLLTGVVEPKLAE 464

Query: 472 LEQDLGSSGKKVITILRD-SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            E     +       +++ + +     +  AR +   +  A   A L R     +
Sbjct: 465 AETSASRAVSHARAWIKEMAAADRPGLEAGARRVAITLGRALQLALLVRHAAWAM 519


>gi|196010794|ref|XP_002115261.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens]
 gi|190582032|gb|EDV22106.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens]
          Length = 545

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 122/522 (23%), Positives = 208/522 (39%), Gaps = 48/522 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + K+L   G    +    E  R A  N PQL  +   G R +++E    W ++   S  
Sbjct: 5   GIVKDLTRFGHRTATD-ILENGRQAELNPPQLVTHDAWGRRINRLETSSGWKSMHAVSAQ 63

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVH 171
           +GL    +++ +    R      + A+L L       +    ++T  +   +        
Sbjct: 64  EGLVAIPYEKKYAEWSR----IYQVAKLSLFHCSSGLYTCPLAMTDGAAKVIEGIRKEKK 119

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +    +SR    T++ P Q      G  +TEKRGG+D+    +   K S+G Y L G 
Sbjct: 120 SIYLLNAYSR---LTSRDPEQ--FWTSGQWMTEKRGGSDVGNTETIAIKYSNGRYKLYGD 174

Query: 232 KWFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           KWF S+  S+    LA++                F +     DG  N +   RLKNK+G 
Sbjct: 175 KWFTSAVDSNIAFTLAKIANDKSNTPAGGDNPSLFYLETRNPDGELNNINVNRLKNKLGT 234

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           R   T EL    T    + +       +  M  +  L ++I +V  MR  L  A  YA++
Sbjct: 235 RQLPTAELTLDGTIAEKVSEDGRGVSGISPMLTITRLHNSISAVGSMRRILTLAEAYAKQ 294

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAP 398
           R      L   P+  R +  + ++   A  L   L       +  KS  +     R++ P
Sbjct: 295 RTAFRKYLCQHPLHARTLTQMEVESRGALLLVMELGRLIGLEECGKSNEQNLNLMRLLVP 354

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ITK +  K A  +++E +EC GG GYIE+  +   +R++    I  G+ N + LDVL  L
Sbjct: 355 ITKLYTAKQAMQIVSEGLECFGGQGYIEDTGLPTIFRDAQVLPIWEGTTNILSLDVLRSL 414

Query: 459 EK-GTNLFEQLFSTLEQDL--GSSGKKVITILRDSISLCKED----------------KG 499
            K   ++ +   S++++ L    + K  +  +  S+    E                 + 
Sbjct: 415 FKSKGSVLQAFLSSVQERLAIAMAAKSELQDVAKSVGTAAEAIKKFAYQVEQQHEQFLEV 474

Query: 500 LARFLTEKIALASSAAALYRAG----MNDIADVFLENRFLDN 537
            AR  +  +A     + L          ++ D+F+  RF D 
Sbjct: 475 AARDFSYSLARVFMGSLLVEHAGHIESGEV-DLFIAERFCDA 515


>gi|120437238|ref|YP_862924.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117579388|emb|CAL67857.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 380

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 127/373 (34%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER +K EF      L+++    G    +    +          + A          A  +
Sbjct: 30  ERDEKQEFP---RELVKKMGDLGFLGMMASPEYGGGGMDTISYVLAMEEISKIDASASVM 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +S  +      +         K +  K+ + E                   L+E   G+D
Sbjct: 87  ISVNNSLVCWGLDSFGNEEQKKKYLSKLTTGE-------------KLGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +      D         W  +   +D ++++AQ +       +   + +    G 
Sbjct: 134 ATSQRTTAIDKGDHYIINGTKNWITNGSTADYYLVIAQTDKEKKHKGINAFIVEKDSEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                + K+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 194 EIGPKEQKLGIRGSDTHSLNFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A  Y+++R   G  + +   +   +AD+   I A+  +  + A   D+ ++  
Sbjct: 254 AAGAYELAKDYSKQRKAFGTEICNHQAIAFKLADMHTTIEASRHMVMKAAWDKDQGQNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A       K +  K A  V  EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 314 LSGAMA-------KLYASKTAMDVTVEAVQVHGGNGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   + K
Sbjct: 367 EIQKIVISRSILK 379


>gi|253681483|ref|ZP_04862280.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
 gi|253561195|gb|EES90647.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           D str. 1873]
          Length = 379

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 129/377 (34%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P    + ++    G+    + + +        ++ +    +       
Sbjct: 26  PIAAETDATGVFPM--EVYKKLGKYGIIGLPYPKEYGGTGGDYLSYILAVEEISKACGTL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GISYSVNTSLCCGAIYQNGTEEQKKKYLPDLCSG-------------KKIGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   +  D  Y L+G K F+++ P+++ F++ A  +   G   +   + +  
Sbjct: 131 GTDASGAQTVAVRDGDN-YILNGQKCFITNSPLAETFVIFAITDRSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G R     E+   +        L     G    MK L    +  A  
Sbjct: 190 FPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGKGFGIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +   A  Y + R   G  L     +   +AD+ + I  +  L ++ A   +  
Sbjct: 250 GLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSRYLLYQAAMDKNNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  AA A       K  C   A  V  EA++  GG GYI++  + R  R++    I 
Sbjct: 310 RPYSVSAARA-------KLSCTDTAMYVTTEAVQLFGGYGYIKDYPVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|148381147|ref|YP_001255688.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|153932219|ref|YP_001385522.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397]
 gi|153936132|ref|YP_001388928.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall]
 gi|148290631|emb|CAL84760.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502]
 gi|152928263|gb|ABS33763.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397]
 gi|152932046|gb|ABS37545.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall]
          Length = 379

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 76/375 (20%), Positives = 142/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSVAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MPGFSIGKTEDKMGIRASSTTELIFEDVKVPKQNLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKSAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 KNYTVDAA-------EAKLYAAETAMYVTNKSLQVLGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + N L
Sbjct: 363 EGTSEVQKMVIANNL 377


>gi|11498451|ref|NP_069679.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304]
 gi|2649762|gb|AAB90397.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304]
          Length = 381

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G+ +D+   +P    + R++   G   +     +             A  +  A    
Sbjct: 26  PYGKEYDEKGEYP--WEIFRKAAKLGYVAADIPEKYGGAGLDYLGCAIIAEEFTRADSSI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +     MV    T    + + PK+              K      + +TE   G
Sbjct: 84  GSAVLTASLGCPMVKYFGTEEQKERYLPKVV-------------KGETPSAIAITEPDAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ AI ++ +++ DG + L+G K F+++  +S+  ++LA+ +   G   +   L +   
Sbjct: 131 SDVQAIKTKAERV-DGGWKLNGTKTFITNGSVSEWVVILAKTQPDAGYRGISAFLVETGW 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G   +R+K K+G   + T E+   + F      +G  N     +        +    + 
Sbjct: 190 DGYEARRIK-KMGLNCHDTAEIYLKDVFVPETHIIGQENFGFYQLMRFFNESRVFVGAVQ 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +   A+ YA++R   G  LI+   ++  +AD+  DI AA  L ++ A   D  K
Sbjct: 249 LGMAVGAYERALEYAKQRKAFGKPLIEHQAIQFKLADMWKDIEAAKLLIYKAAWLIDRGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +          ++   K +  + A     EA++  GG GY +E  I R+YR++   +I  
Sbjct: 309 ANPA-------LSSAAKLFASETAIKATYEALQIFGGYGYSKEYDIERYYRDARVGTIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   +
Sbjct: 362 GTSEIQKLIIARAI 375


>gi|311748610|ref|ZP_07722395.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577134|gb|EAZ81382.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 379

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 152/381 (39%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLM 143
               P  + WD  +F P    L ++    GL   +    F         +      +  +
Sbjct: 22  KEITPFRKEWDDTQFFP--KDLFKKLGELGLMGVLVPTDFGGAGFGYDEYVTAIVEVTKL 79

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  L + +      + L  +    + + PK+ + E             +    GLT
Sbjct: 80  DPSIGLSLAAHNSLCTGHILLFGSEEQKQKYLPKLATCE-------------LLGAWGLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D   + +   K  D  + L+G K F++  +S D  +++A+         +   +
Sbjct: 127 EPNTGSDAGNMKTVAVKDGD-YWILNGAKNFITHGVSGDLAVVIARTGEVGDSHGMTAFI 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLD 319
            +    G    R ++K+G R++ T E+ F +        L NV  G ++ MK+L    + 
Sbjct: 186 VERGTPGFKGGRKEDKLGMRASETAEMIFEDCKIHESQVLGNVGDGFIQSMKVLDGGRIS 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A +S+     +L  +I Y++ R   G  +     +   +AD+A  + AA  L  + ++ 
Sbjct: 246 IAALSLGIAEGALEASIQYSKEREQFGKPISRFQGISFKLADMATQVEAAKLLIMKASDM 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +  +  +A A       KY+  ++  +V  EA++  GG G+ ++  + ++YR+S  
Sbjct: 306 KNRGEKVTLASAQA-------KYYASEVCVSVSNEAVQIFGGYGFTKDYPVEKYYRDSKL 358

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+     L +   + K
Sbjct: 359 CTIGEGTSEIQKLVIAREVLK 379


>gi|300770148|ref|ZP_07080027.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762624|gb|EFK59441.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 379

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 133/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D++   P  H  +++    G    + D  +        A+ +    L  +    A  + +
Sbjct: 32  DELAKFPYEH--VKQMGQLGFMGMMVDPKYGGAGMDTLAYTLVLEELARIDASAAVIMSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T      +   + S E                   L+E   G+D  +
Sbjct: 90  NNSLVCYGLDAFGTEEQKNKYLYPLASGE-------------KLGAFALSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +  +   D         W  +   +D ++++AQ     G   +  L+ +    G    
Sbjct: 137 QHTLAEDKGDHYLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGINVLIVEKGMEGFTIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
             +NK+G RS+ T  L FS+        +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA+ R   G  + +   ++  +AD+ ++I AA  L  + A   D  +   + A
Sbjct: 257 AYELALAYAKERKTFGKPISEHQAIQFKLADMEMEIEAARLLIHKAAWLKDNGQPYGKAA 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG GY++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLFASEVAMKTTIEAIQIHGGYGYVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            L +   + K
Sbjct: 370 RLVIAREILK 379


>gi|212635305|ref|YP_002311830.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212556789|gb|ACJ29243.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 586

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 94/471 (19%), Positives = 178/471 (37%), Gaps = 54/471 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y++       L+  + + P     EL  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYNAPLAEMRFLLENVFDAPKTWS-ELPAMAESVDMDTAAAILDEADKISRELIHPIN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G         DKV     + A+  +    G      D     +   +   +    +  
Sbjct: 60  RNGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPDLGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    T  + + + P ++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALAIHAHGTEAIKQQYLPMMYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--EGRVGC 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +       PNG+    +++K+G + +AT  + F +  G+L+G  N     + 
Sbjct: 227 FLVPKIKVNDDNSLGLPNGVSVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         ++    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPILVHGDVRRML 346

Query: 360 ADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +     A  AL         LA   D  +++++ + Y  ++ P++K +          
Sbjct: 347 LTVRTLTEAGRALSVYTGQQLDLAKYSDNGEAKAKASRYVGLLTPVSKAFLSDRGLDAAI 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            A +  GG GYI E  I +  R++    I  G+     +D L     G NL
Sbjct: 407 MAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 457


>gi|312963447|ref|ZP_07777929.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311282253|gb|EFQ60852.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 592

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/561 (18%), Positives = 203/561 (36%), Gaps = 70/561 (12%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+   F   N ++    L   +        + +E + E     TA+ +A ++  
Sbjct: 10  DMRFVLNEV--FEVANTWAQLPALADTV------DAETVEAILEEAGKVTAKSIAPLSRG 61

Query: 80  NTPQLHAYGPGGERW-DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                      G RW D V F P             G      D +F  +   +A   + 
Sbjct: 62  G-------DEQGCRWEDTVVFTPDGFPQAYTTYAEGGWVGVGGDPAFGGMGMPKAVSAQV 114

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +   + L  G     +  +   +A   +  +   + PK++S E+             A
Sbjct: 115 EEMINSSSLAFGLYPMLTSGACVSIATHASEELKAAYLPKMYSGEW-------------A 161

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
             + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++   
Sbjct: 162 GSMCLTEAHAGTDLGMIRTKAEPQADGSYTVSGTKIFITGGEHDLTENIIHLVLAKLPDA 221

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                 +  FLVP+ + +     G+ N +    +++K+G +++AT  + F    G+L+G+
Sbjct: 222 PAGPKGISLFLVPKFMVNADGSLGARNPVSCGSIEHKMGIQASATCVMNFDEAVGYLVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------IL 349
            N     +  M     L   I  ++    S   AI YAR R  S               +
Sbjct: 282 PNRGLAAMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQAKDKAADPI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYW 403
           I  P ++R +  +        A S  +A   D AK   + AA         ++ P+ K +
Sbjct: 342 IVHPDVRRMLLTMKASNEGGRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAF 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
              +         +  GG GYI E    +  R+     I  G+     LD++   ++  G
Sbjct: 402 LTDLGLETTVLGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSG 461

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAAL 517
              +      + Q +  +G +++   +   +       L  ++ ++         +A+  
Sbjct: 462 GAFYRLFADEIRQFIAGAGAELVEFTKPLSAAVDNLDELTAWVLDRAKANPNEIGAASVE 521

Query: 518 YRAGMNDIADVFLENRFLDNC 538
           Y      +A  ++  R     
Sbjct: 522 YLHAFGYMAYAYMWARMAKAA 542


>gi|257463457|ref|ZP_05627852.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium sp.
           D12]
 gi|317061019|ref|ZP_07925504.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium sp.
           D12]
 gi|313686695|gb|EFS23530.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium sp.
           D12]
          Length = 378

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 139/377 (36%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+   +P      ++ +  G         +         K              
Sbjct: 26  PIAEEIDRDSIYPE--ETFQKMVKCGFTGIGIPVEYGGSGGGDIIKCIVVEEIAKKCAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S        +    +    K + P++                       LTE   G
Sbjct: 84  AGILSIHGIFGQSILKFGSEEQKKFYLPQVT-------------NGGKHGAFALTEPDAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  ++  K  +  Y ++G K F++    +D  ++ A  +   G   +  ++ +   
Sbjct: 131 SDAGAAKTRAVKDGEE-YIINGTKCFITGGATADYVLVFALTDPSKGLKGLSAIVVEKGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    + ++K+G R++ T EL F +    +    N+     +  KI +I LD A + V 
Sbjct: 190 PGFTIGKKEDKMGIRASETSELVFDHCRVPVK---NLIGSEGQGFKIAMIMLDGARIGVG 246

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     E+I Y + R   G  +     ++  IA++   I  A  + +R A+  +
Sbjct: 247 AQALGIAEGALEESIKYMKERVQFGKPISALQGLQWYIAEMGTKIECAKWMLYRAASLKE 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    ++EAA A++ A        + A  V   A++  GG GY+++  + R  R++    
Sbjct: 307 QGVPHTKEAAMAKLNAA-------ETARFVTNLALQIHGGYGYMKDYPLERMLRDAKITE 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 360 IYEGTSEIHKVIIARAL 376


>gi|295101904|emb|CBK99449.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii L2-6]
          Length = 389

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 141/384 (36%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ++ D  E+ P     + +    G+    +  S         ++ +    L  +    
Sbjct: 26  PLAKKVDAEEYFP--KETVEKMGKLGMMGIYFPTSVGGAGGDVLSYVMAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    TP   + + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTPEQKEKYLPKLCSGEW-------------LGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RVGCFLVPRL 261
           GTD     +   +  D  + L+G K F+++   +D FI++A  +           L    
Sbjct: 131 GTDAQGQQTTAVEDGD-YWVLNGSKIFITNAGYADVFIVIAVTDKVLDKKGRPTKLCSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + + +  G    + ++K+G R ++T EL F +        L V     +    +  LD  
Sbjct: 190 IVERTDPGFSVGKAEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQ--LAMATLDGG 247

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      + Y + R   G  +      +  +A++   I AA  L +  
Sbjct: 248 RIGIASQALGIAEGALQETVAYVKERKQFGRSISAFQNTQFELAEMKARIEAAKYLVYAA 307

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A    EA + ++      + A   K    + A  V    ++  GG GY  +  I R  R+
Sbjct: 308 ALKKQEAMNGAK--VRYSVEAAQAKLIAARTASDVTRRCLQLFGGYGYTRDYPIERMMRD 365

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+    ++ +   L K
Sbjct: 366 AKITEIYEGTSEVQMMVISGALLK 389


>gi|262378082|ref|ZP_06071239.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|262299367|gb|EEY87279.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 140/378 (37%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P      + +  P    L+++    GL        +  +      ++R A  L   +   
Sbjct: 25  PREHEVAEADKIPE--DLIQKMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGRTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   +S + +  T    + + P+  S E             +     LTE   
Sbjct: 83  RSLIGTNNGIGSSAILIDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPES 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D A++ +   K  D        ++  ++P +  F ++A+    + G   +   L +  
Sbjct: 130 GSDAASLRTTAVKDGDFYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGISAFLVEAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAI 322
             G+   ++  K+G + + T ++ F N        +      G    MK+L    L    
Sbjct: 190 NPGITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV      L +A+ YA  R   G  +    +++  +AD   +I AA  +    A   D+
Sbjct: 250 YSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEIYAAKCMVLDAARRRDQ 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++ S E       A  +K +  +M   V    ++  GG+GYI E SI R YR+     +
Sbjct: 310 GENISTE-------ASCSKMFATEMCGRVADRCVQIHGGAGYISEYSIERFYRDVRLFRL 362

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + K
Sbjct: 363 YEGTTQIQQIIIARNMIK 380


>gi|168179877|ref|ZP_02614541.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
 gi|182669242|gb|EDT81218.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC
           2916]
          Length = 377

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTEEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|225621130|ref|YP_002722388.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
 gi|225215950|gb|ACN84684.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1]
          Length = 639

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 152/404 (37%), Gaps = 46/404 (11%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRS 123
           L    +  A      TP  H +   G+        P     +++    GL      ++  
Sbjct: 11  LRAKIRAWAEEV--VTPIAHEHDQTGK-------FPT--EAVKQLGKGGLDIMGLPFETK 59

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +        A+ I    L  +       L +     +  +    T    K +        
Sbjct: 60  YGGAGFDNIAYAIAVEELSRVDGSMGVILSAHCSLGSYPIYAFGTEEQKKKYL------- 112

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                  P+ +       GLTE   G+D     +  +   D  Y L+G K F+++ + ++
Sbjct: 113 ------VPLAEGKRLGAFGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAE 165

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           ++++ A     +G   +   + +    G  +    +K+G R++AT +L F N        
Sbjct: 166 SYVVFAVTTPGIGTKGISAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNVKVP---K 222

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
            N+     +  KI +  LD   + ++   + +A+     A+ Y++ R   G  +  Q  +
Sbjct: 223 ENLLGKEGQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  + AA  L +  A   D  +    E+A A       K +  ++   V+ +A
Sbjct: 283 AFKLADMATKLRAARLLIYSAAAMKDRHEPYGTESAMA-------KLYASEIGLEVVNQA 335

Query: 416 MECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG+GYI+    + R YR++   +I  G+     + +   +
Sbjct: 336 LQIHGGNGYIKGAYIVERAYRDAKICTIYEGTSEIQKVVISAAI 379


>gi|313117232|ref|YP_004044215.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312294123|gb|ADQ68554.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 586

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 134/518 (25%), Positives = 219/518 (42%), Gaps = 43/518 (8%)

Query: 35  NAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+ D  L   +               L   G  +   T  + A +A+ N P+L  +  
Sbjct: 17  NYYTYDPSLQFELRRRCDPEELDWGESNLREFGAMIG-HTVADNADVADDNPPKLRTHNK 75

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE  +++E HPA     R     G+   +++ S        +      + YLM    + 
Sbjct: 76  HGEVINEIEHHPAHIENERLVYEAGVIADVFE-SPPGREDPVSFPYHFGQFYLMEYASSV 134

Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            L  P   +  A++V         + +   + +R+YD           +   + LTEK+G
Sbjct: 135 GLSCPGAMTGGAALVLDKFDDGSLQRFYDGLTARDYDDL---------MTGAMFLTEKQG 185

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRL 261
           GTD+ A     +   DG Y L G KWF S+  S+A ++LA+          +  FLV   
Sbjct: 186 GTDVGANEVTAEPQEDGTYELYGEKWFCSNIDSEAALVLARRPAAPDGTEGLSLFLVSTH 245

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
             DG P    ++RLK+K+G  +  T E+ F     +L+G+       + +M     L +A
Sbjct: 246 DRDGEPTNYRFRRLKDKLGTVTVPTGEVVFEGAEAYLIGESENGFRQMSEMLNAERLYNA 305

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I S   M  SL E+  +A  R V G  L + P+M+R +A++A D  AA A +F    +  
Sbjct: 306 IGSCGSMGRSLLESKVHAANREVFGKRLDEHPLMRRDLAEMATDHEAALAFTFEAVEALH 365

Query: 382 EAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +  +++ A    RI+ P  KY   +MA    + AME  GG+GY+EE    R  R +  
Sbjct: 366 RRERENDDEAHRLMRILVPTAKYRTARMAVDTASYAMEIKGGNGYVEEFVHPRLLRNAQV 425

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE--- 496
             I  G+ N M LDVL  +++     E L + +++ L S    V+  L   I   ++   
Sbjct: 426 LPIWEGASNVMALDVLRSMDRE-AAHEPLLTLIDERLDSVTHPVLERLAAEIRDERDGLA 484

Query: 497 -------------DKGLARFLTEKIALASSAAALYRAG 521
                         +  A+ LT+ I   ++AA L    
Sbjct: 485 NAITAVGTSDGEYAQTQAKELTDYIFDVTTAAILVEQA 522


>gi|226949464|ref|YP_002804555.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
 gi|226841710|gb|ACO84376.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 377

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTEEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGDH-YILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|126652587|ref|ZP_01724751.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126590578|gb|EAZ84695.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 378

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 139/379 (36%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ER +  EF      LL++    GL                 ++ I    L  ++ + 
Sbjct: 26  PWVERMEAGEFP---RELLQQMGELGLMGITTPEELGGSGMDFTSYIIAIHELSKVSAVM 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +         K + PK+ + EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPIIYFGNEEQKKRYVPKLAAGEY-------------LGAFCLTEPGA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ S+  +  D         +  +   +D +I+ A  +       +   + +   
Sbjct: 130 GSDAGSLQSKAVRDGDEYVINGSKVFITNGGEADVYIVFASTDPAEKTKGISAFIVEKGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G   + TV+L F N         N+     E  KI +  LD   + ++
Sbjct: 190 PGLIIGKDEHKMGLHGSRTVQLTFDNCRIPAD---NLLGEEGEGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +       A  YA+ R   G  ++ Q  +   +AD+A  + ++  L +R AN   
Sbjct: 247 AQSLGIAEAALEAATAYAKERVQFGKPIVAQQGVSFKLADMATAVESSKLLVYRAANLRA 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      EA+ A       K +  + A     EA++  GG GY E+  + R++R++    
Sbjct: 307 KGLPCGAEASMA-------KLFASRTAVQTAIEAVQVFGGYGYTEDYPVERYFRDAKVTE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 360 IYEGTSEIQRLVISKHLLK 378


>gi|254384912|ref|ZP_05000248.1| fatty acid acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343793|gb|EDX24759.1| fatty acid acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score =  291 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 132/373 (35%), Gaps = 19/373 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      ++          +            +
Sbjct: 33  PFAAAVDEEARFP--QEALDALVANDLHAVHVPETYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  +   +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEELKAKYL-------------GPLAKGDAMFSYALSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTRAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTCEVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +   +
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKIEAARQLTYSAAAKSERVSA 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             ++       A   K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 GGDKEDLTFFGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 376

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 377 TNQVQRIVMARNL 389


>gi|325954364|ref|YP_004238024.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323436982|gb|ADX67446.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 380

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 145/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD+ +  P    + ++    G    +              +      +  +    
Sbjct: 26  PHVMEWDESQTFPV--EVFKKLGEMGFMGILVPEELGGSGLSYDEYIAIVDEISQVDPSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +    + +    T    + W PK+ + E+                 GLTE   
Sbjct: 84  GLSVAAHNSLCTNHILTFATEEQKQRWIPKLATGEW-------------IGAWGLTEHNT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           G+D   +++   K  D  + ++G K F++  +S    ++    G  G        + +  
Sbjct: 131 GSDAGGMSTTAVKDGDE-WVINGAKNFITHAISGDVAVVMTRTGEKGAKNNATAFVVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSV 325
             G    + +NK+G R++ T EL F N       D N      E  K  L  LD   +S+
Sbjct: 190 TPGFTSGKKENKLGMRASETAELIFDNVRV---SDENRLGEVGEGFKQALTILDGGRISI 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + + +A      A+ Y++ RH  G  + +   +   +A++A +I A+  L ++ A   
Sbjct: 247 AALSLGIAKGAYKAALKYSKERHQFGQPIANFQAINFKLAEMATEIEASELLIYKAAYLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S E A A       KY+  +    +  EA++  GG GY ++  + + YR+S   
Sbjct: 307 NNQQPMSTEGAMA-------KYFASEACVRIANEAVQIFGGYGYTKDFPVEKFYRDSKLC 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+     L +   + K
Sbjct: 360 TIGEGTTEIQKLVIGRNITK 379


>gi|167835477|ref|ZP_02462360.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 595

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 183/493 (37%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 478 AEGVKPEMSEFIT 490


>gi|163736082|ref|ZP_02143501.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161389952|gb|EDQ14302.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 593

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/540 (19%), Positives = 200/540 (37%), Gaps = 79/540 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGL 115
           + L     +   +E  ++++     L+      G R +  V + P  + A   +    G 
Sbjct: 30  DELDADFTNAVLEEAGKISSEVLHPLNTVGDIEGCRLENGVVYTPTGFKAAFEQVKEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +               ++  A          +  +AS +    T      + 
Sbjct: 90  TGLDMPEQYGGQNMPYVMGTAVGEMFSAANQAFTMYQGLTHGAASAILAHGTDAQKDTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K F+
Sbjct: 150 PKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           SS   D       ++LA++ G       V  F+VP+ +       G  NG+   +++ K+
Sbjct: 197 SSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKDGGSLGDRNGVSVGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + + +  G+LLG  +     +  M     L   +  ++    +   A+ YA
Sbjct: 257 GIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALEYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               LI  P ++R + D       A A     A   D+A   
Sbjct: 317 KDRLQ-GRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGAKMIDQAHRA 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  
Sbjct: 376 EDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEEWGMSQYTRDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED----KGL 500
           G+     LD++                L QD G   K V+       + CKE+    +G 
Sbjct: 436 GANGVQALDLVG-------------RKLAQDGG---KHVMAFFEMVKNFCKENGDISEGY 479

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           ++   E   L +++  L  AGM      F++N       + +  L G ++  H+   + L
Sbjct: 480 SKEFIEP--LKAASKDLQAAGM-----YFMQN----GMTNPNNALSGSYDFMHMFGHVCL 528


>gi|302544872|ref|ZP_07297214.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462490|gb|EFL25583.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 387

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 131/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH      S+          +            +
Sbjct: 35  PFAAEVDEEARFP--QEALDSLVASDLHAVHVPESYGGAGADALATVIVIEEVARVCASS 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 93  SLIPAVNKLGSLPVILSGSEELKKKYL-------------GPLAKGDAMFSYCLSEPDAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +SD + ++A  +       +   + +    
Sbjct: 140 SDAAGMKTKAVRDGDFYVLNGVKRWITNAGVSDYYTVMAVTDPEKRSKGISAFVVEKDDE 199

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 200 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 259

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA AL+++ A + +    
Sbjct: 260 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKITAARALTYQAAAASERVD- 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 319 -----ADLTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 373

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 374 TNQVQRVVMARNL 386


>gi|47226533|emb|CAG08549.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1206

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 125/545 (22%), Positives = 207/545 (37%), Gaps = 86/545 (15%)

Query: 17  QPSDSLF---ALNQPPLFIGMNAYSSDSLLVALIANFPSV--VHKELELLGEYVLSCTAQ 71
           QPS S     A  Q    +  N +  D+LL   ++          +L   GE V +    
Sbjct: 53  QPSFSGARIGAFFQDRPAL-KNPFLEDALLRGYLSRHLPEQEALSDLCAFGERVAN-EVD 110

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E  R    + P+L  +   G R D +   PAW  +   S  +GL    ++R+F    R  
Sbjct: 111 EWGRECELHPPRLVHFDSWGCRVDHIVTSPAWKRMKDLSAQEGLVAIGYERAFGEWSR-- 168

Query: 132 AHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               + ++L+L +     +      +  +A ++          +   ++ +R+       
Sbjct: 169 --VYQMSKLFLFSPSSGLYTCPLAMTDGAAKVIQSTGVSSAVAEAYSRLTTRQ------- 219

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                    G  +TE+RGG+D+A+ T +     +DG Y L G KWF S+  +D  + LA+
Sbjct: 220 --PAQFWTSGQWMTERRGGSDVASGTETVALPQTDGSYKLHGFKWFTSATDADVTLTLAR 277

Query: 249 VEGRVGC-----FLVPRL------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           V+GR G        +          EDG   G+  QRLK+K+G R   T EL        
Sbjct: 278 VQGRGGATTPGSRGLSLFYAEVRRDEDGRLKGIEVQRLKDKLGTRQMPTAELLLD----- 332

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                                      +   R  +  A  YA RR   G  L D  +  +
Sbjct: 333 --------------------------GLQAHRRVVQLARDYATRRTAFGKRLKDHALHMQ 366

Query: 358 AIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +A + ++   A  +   +       +   +   +    R++ P+ K +  K A AV++E
Sbjct: 367 TLARMEVETRGAFLMVMDVCRLLGREESGLASQLDTNLLRLLTPLVKLYTGKQAVAVVSE 426

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTL 472
            +EC GG GY E+  +    R++   SI  G+ N + LDVL  +E+  G  L      T 
Sbjct: 427 GLECFGGQGYCEDTGLPGLLRDAQVLSIWEGTTNILSLDVLRCVERSSGMVLHAYFTHTK 486

Query: 473 EQDLGSSG-----------KKVITILRDSISLCKE-----DKGLARFLTEKIALASSAAA 516
               G+SG            + ++ L+D   L         +  AR L   +A A   A 
Sbjct: 487 SLLAGASGVSSLAPAVNAVDRALSELKDFSGLAATKAAGYLELAARDLAYSLARAYMGAL 546

Query: 517 LYRAG 521
           L    
Sbjct: 547 LIDHA 551


>gi|328866543|gb|EGG14927.1| acyl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 644

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WDK EF P    +L+++   G                +            A +  
Sbjct: 290 PHAAQWDKEEFFP--KDVLKKAAELGFGGVYVKDDVGGTGLSRVDATIIFEALSSADVST 347

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++ +         + P + S               +     LTE   G
Sbjct: 348 TAYLSIHNMCAGLIDIYGNEEQRNKFLPSLTSM-------------DLFASYCLTEPGAG 394

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +   K  D  Y L+G K F+S    SD ++++ +  G  G   +  LL +   
Sbjct: 395 SDAASLMTTAVKSGDH-YILNGSKAFISGGGDSDVYMVMVRT-GDKGAKGISCLLVEKDT 452

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  +  T  L F +       L+G          +      L+    S
Sbjct: 453 PGLSFGKKEEKLGWNTQPTRALIFEDCRVPIANLIGKEGQGFNIAMNALNGGRLNIGACS 512

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G +  L  A  + + R   G  L     ++  +AD+A  + A+  +  + A   D+  
Sbjct: 513 LGGAQACLVSARDHLKVRQQFGKPLSQFQSLQFQLADLATKLYASRLMIRQGAKMLDDKD 572

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A +   + K + C     +   A++  GG GY+++  + R+ R+   + IL 
Sbjct: 573 PS------ASVYIAMAKLFACDNCFDICDGALQMHGGYGYLKDYPVERYLRDLRVHRILE 626

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M +     + K
Sbjct: 627 GSDAVMRIITSREMLK 642


>gi|297183600|gb|ADI19727.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 587

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 99/503 (19%), Positives = 195/503 (38%), Gaps = 63/503 (12%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
               LA+  + N   L      G     V   P +     + I DG      D  +    
Sbjct: 52  IILPLAKSGDENPTILE----NGV----VRTPPGYKEAYTKFIEDGWTSLSCDTKYGGQG 103

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
             +        +   A L        S+ + + ++      +   + P++   ++  T  
Sbjct: 104 MPKTVSSFFDEMLSSASLSFKLYSELSIGAYNCISHHANDFIKNKFLPQMVQGKWSGT-- 161

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
                      + LTE   GTD+  + ++  + SDG Y LSG K F++S   D       
Sbjct: 162 -----------MCLTEPVCGTDLGLLKTKAVEQSDGTYKLSGQKIFITSGDHDLTENIIH 210

Query: 244 IMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +++A+          +  FLVP+ L       GS NG+    +++K+G + +AT  L F 
Sbjct: 211 LVIARSSDSPPGTKGISLFLVPKFLVKDDGSIGSRNGVSTGSIESKMGIKGSATCVLNFD 270

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---- 348
           +  G+++G  N     +  M  L  +   I  +    ++   A+ Y++ R   G      
Sbjct: 271 DAIGYMIGPKNKGLNSMFTMMNLERIVVGIQGLGISEIAYQNALSYSKERKQ-GQSNNSK 329

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANS------FDEAKSRSEEAAYARI 395
                  +I+   ++R++ ++   I    AL F L+         ++ K R E + +  +
Sbjct: 330 STNAADYIIEHADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHNDEKVRQEASDFVSL 389

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LD 453
           M P+ K     M   + +EAM+  GG GY +++ I + YR++    I  G+ +     L 
Sbjct: 390 MTPVVKSMFTDMGMEITSEAMQIYGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLV 449

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI----- 508
              L+ K  ++  +    ++ D  +  +K    +++  +  +       ++ EKI     
Sbjct: 450 FRKLVNKNGDIINKYLDMIKNDCNTENEKTKPFIKELNNHIEILSNFTTWIKEKIHNSKD 509

Query: 509 -ALASSAAALYRAGMNDIADVFL 530
            A A+    L   G+  IA  ++
Sbjct: 510 DASAACNDYLKALGLVSIAHAWI 532


>gi|227538607|ref|ZP_03968656.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241526|gb|EEI91541.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 379

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 133/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D++   P  H  +++    G    + D  +        A+ +    L  +    A  + +
Sbjct: 32  DELAKFPYEH--VKQMGQLGFMGMMVDPQYGGAGMGTIAYTLVLEELARIDASAAVIMSA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T      +   + S E                   L+E   G+D  +
Sbjct: 90  NNSLVCYGLDAFGTEEQKNKYLYPLASGE-------------KLGAFALSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +  +   D         W  +   +D ++++AQ     G   +  L+ +    G    
Sbjct: 137 QHTLAEDKGDHYLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGINVLIVEKGMEGFTIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
             +NK+G RS+ T  L FS+        +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA+ R   G  + +   ++  +AD+ ++I AA  L  + A   D  +   + A
Sbjct: 257 AYELALAYAKERKTFGKPISEHQAIQFKLADMEMEIEAARLLIHKAAWLKDNGQPYGKAA 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG GY++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLFASEVAMKTTIEAIQIHGGYGYVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            L +   + K
Sbjct: 370 RLVIAREILK 379


>gi|167837216|ref|ZP_02464099.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 593

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 138/522 (26%), Positives = 230/522 (44%), Gaps = 43/522 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N +++D    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTNDPDCAALVRLHLGEARFRDLEPELRTLGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEALETIDKHPDYVALERVAYSELGLAAMSHRDDAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  +   + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVGRFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +        I+ L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRDTSADGSAIWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A     +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADEGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLF------STLEQDLGSSGKK 482
           AR  R++   SI  G+ N + LDV   +++   L             + L     +   +
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGALSPLRAFLLDTLDAARLPGASAARLHR 485

Query: 483 VITILRDSISLCKE--DKGLARFLTEKIALASSAAALYRAGM 522
            +    D+I+   +  D    R     +  A++A  L   GM
Sbjct: 486 ALDRASDAIAHVAQTGDDAFVRQAASALYHATTAILLASEGM 527


>gi|170755992|ref|YP_001781803.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
 gi|169121204|gb|ACA45040.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1
           str. Okra]
          Length = 377

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTDEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|182438275|ref|YP_001825994.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466791|dbj|BAG21311.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 388

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 132/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       +          +        A   +
Sbjct: 36  PFAAEVDEEGRFP--QEALDALVASDLHAVHVPEEYGGAGADALATVIVIEEVARACASS 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  +   +               P+ K        L+E   G
Sbjct: 94  SLIPAVNKLGSLPVILSGSEELKAKYL-------------GPLAKGDAMFSYALSEPDAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 141 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEFYTVMAVTDPAKRSKGISAFVVEKSDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  ++
Sbjct: 201 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A     AKS
Sbjct: 261 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKLEAARQLTYSAA-----AKS 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A   K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 316 ERVDGDLTFFGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 374

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 375 TNQVQRIVMARNL 387


>gi|209964651|ref|YP_002297566.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209958117|gb|ACI98753.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 380

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 84/397 (21%), Positives = 150/397 (37%), Gaps = 34/397 (8%)

Query: 71  QELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           QELAR  A  +        P    WD+    P    +LR++   G               
Sbjct: 13  QELARGFAREH------LAPNAAAWDEQGIFPV--DVLRKAAALGFAGLYCREEHGGTGL 64

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +            A       ++     + M+    +P     W P +F+         
Sbjct: 65  TRLDAAILFEELSAACPSTAAYLTIHNMVSWMIDSFGSPAQRARWLPSMFAM-------- 116

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
                       LTE   G+D A++ ++ +++ D  Y L+G K F+S   + D +I++ +
Sbjct: 117 -----DRLGSYCLTEPGSGSDAASLRTRAERVGDH-YVLNGTKAFISGAGATDLYIVMCR 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STG 307
             G  G   +  L+ +    GL + + + K+G  S  T ++ F +    +   L     G
Sbjct: 171 T-GGPGPKGISALVVEKGTPGLSFGKKERKMGWNSQPTAQVIFEDCRVPVENRLGEEGEG 229

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               MK L    ++ A  S+ G R  L  A  +   R   G  + +   ++  +AD+A +
Sbjct: 230 FRFAMKGLDGGRINIAACSLGGARTCLELARDHMTARQQFGRPIAEFQALQFMLADMATE 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  +  R A++ D           A     + K +   +   V  +A++  GG GYI
Sbjct: 290 LDAARLMVHRAADALDRGDPE------ATTFCAMAKRFATDIGFKVCNDALQLHGGYGYI 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +E  + R  R+   + IL G+   M + V   L  G 
Sbjct: 344 KEYPVERFVRDLRVHQILEGTNQVMRMIVARRLLAGA 380


>gi|153938784|ref|YP_001392550.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland]
 gi|152934680|gb|ABS40178.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland]
 gi|295320536|gb|ADG00914.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. 230613]
          Length = 379

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 144/375 (38%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSVAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
            +G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  A+ Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKAAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  ++A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTMDAA-------EAKLYAAEVAMYVTNKSLQILGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + + L
Sbjct: 363 EGTSEVQKMVIASSL 377


>gi|297746230|emb|CBI16286.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 69/396 (17%), Positives = 143/396 (36%), Gaps = 30/396 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ A  N        P   R D+  + P    L +      LH     +      + 
Sbjct: 35  ESIAQFAQEN------IAPHASRIDRTNYFPEEVNLWKLMGDFNLHGITAPEEYGGLGLG 88

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +   A    + S    + +     P   + + PK+ S E+      
Sbjct: 89  YLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGNPAQKQKYLPKLISGEH------ 142

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +  ++  G        W  + P++   ++ A+ 
Sbjct: 143 -------VGALAMSEPNAGSDVVSMKCKADRVDGGYILNGNKMWCTNGPIAQTLVVYAKT 195

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 196 DITAHSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGV 255

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M     L  L  A   +  M+  +   + Y R+R   G  + +   ++  +AD+   +
Sbjct: 256 YVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVRQREQFGRPIGEFQFIQGKLADMYTSL 315

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A + +  K   ++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 316 QSSRSYVYSVARNCENGKIDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVN 368

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E    R  R++    I  G+     + +   L K  
Sbjct: 369 EYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 404


>gi|305664397|ref|YP_003860684.1| AcdA [Maribacter sp. HTCC2170]
 gi|88708414|gb|EAR00650.1| AcdA [Maribacter sp. HTCC2170]
          Length = 384

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 155/400 (38%), Gaps = 32/400 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S T + +A  A     Q     P    WD+ +  P   AL +++   G    +    +  
Sbjct: 11  SETQEHVAASAKQFAEQ--HIRPHFMEWDESQEFPV--ALFKKAGEMGFMGILVPEEYGG 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                 H+  A    +     A  L   + +    + +         + W PK+ S E+ 
Sbjct: 67  SGL-GYHEYIAIIEEISKVDPAIGLSVAAHNSLCTNHILSFGNEEQKQRWIPKLASGEW- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D   +++   K  D  + L+G K F++  +S    
Sbjct: 125 ------------IGAWGLTEHNTGSDAGGMSTTAVKDGDD-WVLNGAKNFITHGISGDIA 171

Query: 245 MLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++    G  G    +     +    G    + ++K+G R++ T EL F+N        L 
Sbjct: 172 VVITRTGEKGDSHGMTAFAIEKGTPGFSSGKKEDKLGMRASETAELIFNNCRVSDKNRLG 231

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            V  G ++ MK+L    +    +S+   + +   A+ Y++ R   G  +     +   +A
Sbjct: 232 KVGEGFIQSMKVLDGGRISIGALSLGVSKGAYEAALKYSKERIQFGKPISQFQGISFKLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I A+  L  + A   +E +  ++  A  ++       +  ++   V  EA++  G
Sbjct: 292 DMVTEIEASELLLHKAAFLKNEGRPMTKLGAMCKM-------YASEVCVKVANEAVQIHG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY ++  + + YR+S   +I  G+     + +  ++ K
Sbjct: 345 GYGYTKDFPVEKFYRDSKLCTIGEGTTEIQKVVISKIILK 384


>gi|168179152|ref|ZP_02613816.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916]
 gi|226950627|ref|YP_002805718.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto]
 gi|182669955|gb|EDT81931.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916]
 gi|226841457|gb|ACO84123.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto]
          Length = 379

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 139/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK E +P     + +    G+    + + +          + A           
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +     +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSIAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MPGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKSAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 KNYTVDAA-------EAKLYAAETAMYVTNKSLQVLGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + N L
Sbjct: 363 EGTSEVQKMVIANNL 377


>gi|326778926|ref|ZP_08238191.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326659259|gb|EGE44105.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 132/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       +          +        A   +
Sbjct: 16  PFAAEVDEEGRFP--QEALDALVASDLHAVHVPEEYGGAGADALATVIVIEEVARACASS 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  +   +               P+ K        L+E   G
Sbjct: 74  SLIPAVNKLGSLPVILSGSEELKAKYL-------------GPLAKGDAMFSYALSEPDAG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 121 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPAKRSKGISAFVVEKSDE 180

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  ++
Sbjct: 181 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 240

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A     AKS
Sbjct: 241 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKLEAARQLTYSAA-----AKS 295

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A   K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 296 ERVDGDLTFFGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 354

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 355 TNQVQRIVMARNL 367


>gi|299535046|ref|ZP_07048372.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           fusiformis ZC1]
 gi|298729542|gb|EFI70091.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           fusiformis ZC1]
          Length = 380

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 136/393 (34%), Gaps = 28/393 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R    +  +     P     D+           ++    GL    +   +      
Sbjct: 9   QEMIRDMVRDFAE-KEIKPYAREVDETSTMRI--ESFKKMAELGLLGIPFPEEYGGSGGD 65

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             ++ +    +            +     AS +    T    ++W               
Sbjct: 66  TVSYALAVEEIGRACGGTGLSYAAAVSLGASPIYNFGTEEQKQEWL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ K       GLTE   G+D     +      D         W  ++  +   I+ A  
Sbjct: 113 PLAKGETLGSFGLTEPNAGSDAGGTRTTAIIDGDDYIINGEKCWITNAGYARQIIVTAVT 172

Query: 250 EGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
             R  G  ++  ++   +  G+      +K+G R + T E+   N       LLGD    
Sbjct: 173 GKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLENVRVPRTNLLGDEKRG 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                +      +  A +SV   + +  +A+ +A+ R   G  +     ++  +AD+A++
Sbjct: 233 FSQFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKLADMAME 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L  + A   D+ K   +EAA A       K +  +M      +A++  GGSGY+
Sbjct: 293 IELARTLVHKAAWLKDQKKPFGKEAAMA-------KLFASEMGFRTCNQAIQIHGGSGYM 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +E  + RH R+     I  G+     L +  L+
Sbjct: 346 KEYDVERHLRDIKLMEIGEGTSEIQRLVISRLI 378


>gi|325521384|gb|EGD00224.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia sp. TJI49]
          Length = 595

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/492 (19%), Positives = 179/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +        L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFC---AEVLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ D + 
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVSDFVE 477

Query: 493 LCKEDKGLARFL 504
                  ++ F+
Sbjct: 478 AEGVKPEMSEFI 489


>gi|313676498|ref|YP_004054494.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312943196|gb|ADR22386.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 379

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 146/373 (39%), Gaps = 26/373 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGH 150
           ++WD+ ++ P    ++++    GL   +  + +       + +      L  +       
Sbjct: 29  DQWDEEQYFPI--EVMKKLGELGLMGVLVPQEYGGAGFGYEEYVTAIMELAKVDPSIGLS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +      +         K W PK+ + E+                 GLTE   G+D
Sbjct: 87  MAAHNSLCTGHILQFANDEQKKRWLPKLATAEW-------------LGAWGLTEPNTGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + +   +  D         W       D  +++ +         +   + +    G 
Sbjct: 134 AGNMKTTAVQDGDYWVINGAKNWITHGISRDIAVVIVRTGEIGDSHGMTAFVIENGTEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSG 327
              R +NK+G R + T E+ F +        L NV  G ++ MK+L    +  A +S+  
Sbjct: 194 KGGRKENKLGMRLSETAEMIFEDCRVHKDNILGNVGEGFIQAMKVLDGGRISIAALSLGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A+ Y++ RH     +     +   +AD+A ++  A  L+F+ A+  +  KS +
Sbjct: 254 AEGAYEAALAYSKERHQFNQPISSFQGIAFKLADMATELEGAKLLTFQAADLKNNGKSVT 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E+A A       KY+  ++A     EA++  GG GY ++  + ++YR+S   +I  G+ 
Sbjct: 314 KESAMA-------KYYASEVAVKNSVEAVQIFGGYGYTKDYPVEKYYRDSKLCTIGEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               L +   + K
Sbjct: 367 EIQKLVISRSILK 379


>gi|55981113|ref|YP_144410.1| acetyl-coenzyme A dehydrogenase, medium chain [Thermus thermophilus
           HB8]
 gi|55772526|dbj|BAD70967.1| acetyl-Coenzyme A dehydrogenase, medium chain [Thermus thermophilus
           HB8]
          Length = 410

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 148/399 (37%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     ++    P    +D+ E  P    ++ +    GL  +I   
Sbjct: 33  DFSLTEEQRQLQALARRFAKEVIL--PVAREYDEKEEVP--WPVIEKLHEVGLLNAIIPE 88

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K   ++        A +    +   S    + V L  T    + +        
Sbjct: 89  EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFL------- 141

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 142 ------RPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEW 195

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V   +    V  L+ +    G    ++  K+G R++ T EL F +    +   L
Sbjct: 196 VVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRL 255

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M+ L    +  A  SV   R +L EA  YA+ R   G  + +   ++  +
Sbjct: 256 GEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKERQAFGQPIANFQAIQFKL 315

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     +A++  
Sbjct: 316 ADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIH 368

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  + +  R+   N I  G+     L +   +
Sbjct: 369 GGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHI 407


>gi|255530749|ref|YP_003091121.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255343733|gb|ACU03059.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 390

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 147/391 (37%), Gaps = 34/391 (8%)

Query: 75  RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQA 132
             A  N  P+L         WD+ ++ P    + ++    GL   +   S+       Q 
Sbjct: 28  DFAEKNIRPKLM-------EWDEAQYFPV--EVFKKLGELGLMGVLVPESYGGSGFGYQE 78

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +      +  +       + + +      +      +  + W PK+ + E+         
Sbjct: 79  YVDVIVEVAKVCGSIGLSVAAHNSLCTGHILAFANEQQKQKWLPKLATAEW--------- 129

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                   GLTE   G+D   + +      D         W       D  +++ +   +
Sbjct: 130 ----IGAWGLTEANTGSDALRMMTTAVSDGDEYVINGAKNWITHGKTGDVAVVMVRTGEK 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVED 311
                +  ++ +    G    + +NK+G R++ T E+ F N        L  V  G  + 
Sbjct: 186 GDSKGISAIVVERGTPGFSAGKKENKLGMRASETTEMIFDNCRVPAANLLGKVGEGFKQA 245

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK+L    +  A +S+   + +   A+ YA+ RH  G  +     +   +AD+A +I AA
Sbjct: 246 MKVLDGGRISIAALSLGIAKGAYEAAVAYAKERHQFGQPIASFQGISFKLADMATEIEAA 305

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L  + A+  +     ++E+A A       KY+  ++A     EA++  GG GY ++  
Sbjct: 306 ELLIRQAADLKNRGLQMTKESAMA-------KYFASEVAVRCATEAVQIFGGYGYTKDFP 358

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + + YR+S   +I  G+     + +   + K
Sbjct: 359 VEKFYRDSKLCTIGEGTSEIQKIVIAREVLK 389


>gi|226954433|ref|ZP_03824897.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834782|gb|EEH67165.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 595

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/519 (17%), Positives = 191/519 (36%), Gaps = 58/519 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSIH 112
           + L  +         +E+A+ A   T  L       G RW   +V     +    R+   
Sbjct: 31  ENLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARWVNGEVFTPEGFKEAFRQYAE 90

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + A  +              SV +   +    +    +
Sbjct: 91  GGWIGLGADEEWGGQAMPKMLTVLADEMLFATNPSFLLYPLLSVGAGMALNSYASQEQKE 150

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 151 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 197

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L +     G  N +    ++
Sbjct: 198 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNDDGSLGERNPVGPGSIE 257

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 258 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 317

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA  R                  ++    ++R + ++  +  A+ A +  +    D   
Sbjct: 318 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 377

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              + ++  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 378 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 437

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++   +++ G     +  + + +D  ++    +  ++D+ +    
Sbjct: 438 IAQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI-RDFANTLDADLNFIKDATLDAAT 496

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           E + + +F+ E+ A      +SAA  Y   +  ++  ++
Sbjct: 497 EIEAVTQFIIEQAAENVEFPNSAAVDYLHAVGLLSFAYM 535


>gi|312111285|ref|YP_003989601.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216386|gb|ADP74990.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 390

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 132/364 (36%), Gaps = 24/364 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++ ++   GL        +  +      K                L+       ++ + 
Sbjct: 40  KVVEKAKKMGLFGLSIPEEYGGLGLGMVGKCAIYEELGKTHNGFTTLIGAHTGIGTVGIV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            M      + + PK+ + E+                  LTE   G++   + +   +  D
Sbjct: 100 EMGNEEQKRRYLPKMATGEW-------------IGAFALTEPSAGSNATNLKTTAVRKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++  +  F ++A  +   G   +   + +    G    + + K+G R 
Sbjct: 147 RYIINGSKHYITNARDAHVFTVMAVTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRG 206

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + + EL F +    +   L     G V  +KIL       A  ++   +  L +++ YA 
Sbjct: 207 SHSCELFFEDLEVPVENRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAM 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +I+Q  +   +AD+A++I     +++R+A   D+  +  +EAA         
Sbjct: 267 EREQFGKPIIEQQAILHMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAAM-------V 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  ++   V   A++  GG GYI E  I R YR++    I  G+       +   L K
Sbjct: 320 KLYGSEVYNRVADRAVQVHGGLGYIAEYPIERFYRDARITRIYEGTSEIQRNIIGAQLIK 379

Query: 461 GTNL 464
              L
Sbjct: 380 EYRL 383


>gi|163754130|ref|ZP_02161253.1| ribonuclease HII [Kordia algicida OT-1]
 gi|161326344|gb|EDP97670.1| ribonuclease HII [Kordia algicida OT-1]
          Length = 380

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER +K EF      L+R+    G    + D  +        ++ +    L  +    +  
Sbjct: 30  ERDNKQEFP---QELVRKMGELGFMGIMVDPKYGGSGMDTISYVLIMEELSKIDASASVI 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   +      +    T    + +  K+ + E                   L+E   G+D
Sbjct: 87  VSVNNSLVCYGLEAYGTEEQKQKYLTKLATGEN-------------VGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +    + D         W  S   +D ++++AQ +   G   +   + +    G 
Sbjct: 134 ATSQKTTAIDMGDHYVINGTKNWITSGGRADVYLVIAQTDKDKGHRGINAFIVEKGTPGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G R + T  L+F++        +     G    MK L    +  A  ++  
Sbjct: 194 DIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A+ Y++ R   G  + +   +   +AD+ ++I AA  L    A   D  ++  
Sbjct: 254 ASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYIEITAARHLVMEAACKKDAKENYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A       + K +  K A  V  EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 314 MASA-------VAKLFASKTAMDVTVEAVQVHGGNGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEKG 461
               + +   + KG
Sbjct: 367 EIQKIVISRGVIKG 380


>gi|150019353|ref|YP_001311607.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149905818|gb|ABR36651.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 379

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 145/397 (36%), Gaps = 39/397 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
            +E A   N   P++ AY   GE        P      ++    GL    + + +     
Sbjct: 16  VREFAE--NEIKPKVVAYDESGE-------FPI--DTYKKMGELGLIGLPYPKEYGGTGG 64

Query: 130 KQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                + A      +   L   + +S S+ S  ++    +    K + P I S       
Sbjct: 65  DYLSYVLAVEEISKVSGSLGISYSVSTSLCSGGII-NAASEEQKKRYLPDILSG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
                        GLTE   G+D     +   K     Y L+G K F+++  +S+ F++ 
Sbjct: 118 -------KKFGSFGLTEPNAGSDAGGCITTADKNG-EYYILNGAKCFITNGPLSETFLVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A  +   G   +   + +    G    +++NK G RS    EL F N    +   +    
Sbjct: 170 ALTDKSKGAKGLSAFIVEKEFEGFSIGKIENKCGIRSAQVSELVFENCKVPVENLVGAEG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    +  A   +     +   A  Y + R   G  L     +   +A++ 
Sbjct: 230 KGFGIAMKTLDGGRIGVAAQGLGIAEGAFEVAKQYMKEREQFGKPLWKNQYLAFKMAELE 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+I  A  + ++ A    E K  S  AA A++        C   A  V  EA++ +GG+G
Sbjct: 290 LEIEQAKYMVYKAAMDKQEGKPYSVSAAKAKLA-------CTDAAMHVTTEAVQMLGGNG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y+ E ++ R  R++    I  G+     L +   + +
Sbjct: 343 YMREYNVERMMRDAKITQIYEGTNEIQKLIISGNIFR 379


>gi|291166778|gb|EFE28824.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
          Length = 379

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 135/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    GL    + + ++       A+ +    L  +    
Sbjct: 26  PLAADVDEEERFPE--ETVAKMQKIGLLGIPYPKEYKGQGGDYLAYVMAVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +    + +    T    + +   + S E                  GLTE   
Sbjct: 84  GVIVSAHTSLCCAPIYENGTDEQKEKFLAPLISGE-------------KLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A  T+      D  + L+G K F+++ + +D ++++A  +   G       + +  
Sbjct: 131 GTDAAGQTTTAVLDGDE-WVLNGSKIFITNAIYADTYVVIAVTDKSQGTRGTSAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G  +   + K+G R +AT EL F N          +          +  LD   + ++
Sbjct: 190 TPGFSFGLKEKKMGIRGSATAELIFENCRIPKGNL--LGGLGKGFKIAMQTLDGGRIGIA 247

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EA+ Y + R   G  L      +  +AD+   + AA  L ++ A    
Sbjct: 248 AQALGIAEGALDEAVAYVKERRQFGRPLSKFQNTQFQLADMFARVDAAKYLVYKAAWKKQ 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  ++A A       K +  + A  V  +A++  GG GY  +  + R  R++    
Sbjct: 308 NKLPYGVDSATA-------KLFAAETAMFVTTKAVQLFGGYGYTRDYPVERMMRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 361 IYEGTSEVQRMVIAKSLLK 379


>gi|254503978|ref|ZP_05116129.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222440049|gb|EEE46728.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 601

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 137/551 (24%), Positives = 227/551 (41%), Gaps = 36/551 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTP 82
            P   G N +  D  L  L+  +           +L+  G  +       L+R A+ + P
Sbjct: 26  APDCHGQNFFEIDRSLQDLLTLYLPEDLRVHLWPKLQEFGALLGG-EIDTLSRTADRHVP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH   P G   D +EFHPA+  + + +  D  +                 H ++    Y
Sbjct: 85  VLHHRDPRGRFEDWIEFHPAYKRMEQITFCDFAMAGMTGKPGVFGWPEPMPHTVKFLFQY 144

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L+ Q E G L   S+T  +A+M+       + + +  ++ S++          +T ++ G
Sbjct: 145 LLGQSEFGQLCPISMTETTAAMIKKFGGEALIERFYDRLISQD---------PETRMSGG 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TE+ GG+D++ +  +  +  DG + L G KWF S+  +D  ++LA+  G       +
Sbjct: 196 QFMTERHGGSDVSQLAVEA-RFDDGEWRLYGEKWFCSAADADVVLVLARPRGAPAGNKGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR LEDGS N     RLK+K+G  S A+ E+ F     + LGD+     P   M 
Sbjct: 255 AVFALPRRLEDGSRNAYRVVRLKDKLGTLSMASGEVVFEGAVAYPLGDVGAKENPGLKMM 314

Query: 314 I----LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +    L  L     + S MR  L EA+  AR R   G  +I +P+++R +  + +    A
Sbjct: 315 MNQVSLSRLSHGARAASMMRRCLNEAMTVARSRKAFGETIIGKPLLRRQLMKLLVPTEQA 374

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            +++  L      A +    A   ARI+ P  KY   +    V   AME  GG+GYIE+ 
Sbjct: 375 LSMTLYLGTVLTAAANGDTHAERVARILTPAHKYRTARDNIRVATGAMEVRGGNGYIEDF 434

Query: 429 SIARHYRESPANSILLGSGNAMVLDV----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             AR  R++    +  G+ N   LD+    +   E   +L   L   +E   G  G    
Sbjct: 435 VNARLVRDAHVGLLWEGTSNINALDITTRAIGRTEAHKDLKSALLEQIEDCPGLPGSFAS 494

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +    I      + +AR   E  +LA  AA+        +       R   +      +
Sbjct: 495 ALKSSLIKSLDLAEEIARRGEE--SLARQAASAVYHASTAVLLACEGARLGADGGDARRL 552

Query: 545 LHGRFNAAHII 555
           L  R    H +
Sbjct: 553 LLARMVIDHCL 563


>gi|284164207|ref|YP_003402486.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013862|gb|ADB59813.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 140/379 (36%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E +D  E  P  H ++  +   GL  +     +             A          
Sbjct: 26  PHAEEYDTEEKFP--HDIVDEAAEMGLVGASIPIEYGGAGYSTLESAIIAEELFSYDPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +         +         + +               P+ +     G  ++E   G
Sbjct: 84  ALSILACSFGTEAIREFGDEDQKERFLE-------------PVARGEKISGAAISEPDTG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+++++++ +K  D         W  +  + D F+ML + +           +++ +  
Sbjct: 131 SDVSSVSTRAEKDGDEWVINGNKMWITNGTVGDFFVMLCKTDPDAEGRYDGFSQIVVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G   +++  K+G R++ T EL   +        +       ++ M+         A  
Sbjct: 191 RDGFESEKITGKLGIRASDTAELILDDVRVPEENLIGDQGAAFLQQMQFFDATRTGVAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +L  A+ YA+ R   G  + +   ++  +AD+A    AA  L+++ A + D+ 
Sbjct: 251 GVGIAKGALRAALEYAQDREQFGQPISEFQAIQHKLADMATKTEAARNLTYKAAWNVDQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              ++       +A + K +  ++A  V  EA++  GGSGY+ +  + R YR+S    I 
Sbjct: 311 NDITK-------LASMAKEYSSRIAVDVANEAVQIHGGSGYVNDFPVERFYRDSKITQIY 363

Query: 444 LGSGNAMVLDVLN-LLEKG 461
            G+       +   LL KG
Sbjct: 364 EGTSEIQKNVIARELLGKG 382


>gi|170699188|ref|ZP_02890241.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170135913|gb|EDT04188.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 595

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 179/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           R+ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  RQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQRQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFAE 477

Query: 493 LCKEDKGLARFL 504
                  +A F+
Sbjct: 478 AEGVKPEMAEFI 489


>gi|309781942|ref|ZP_07676673.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308919286|gb|EFP64952.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 604

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 134/500 (26%), Positives = 220/500 (44%), Gaps = 48/500 (9%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N +  D  L  L+  +           +L+ LG+ V S      A  A++N PQ
Sbjct: 37  PDSRGINFFHVDPDLGRLLRLYLGDAPYRELEPQLKSLGQRV-SDELDAWAISADHNPPQ 95

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      GE    +  HP + AL R +  + GL       +  P        ++ A  YL
Sbjct: 96  LRHRTRRGEALQTIVKHPDYVALERVAYAELGLASMSHVGNAPPP------LVKYALTYL 149

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             Q E G     S+T +    L     P +   + P + SR++D   +  M         
Sbjct: 150 FVQAEFGLCCPVSMTDSLTRTLRKFGDPALLARYLPMLASRDFDVLYQGAMF-------- 201

Query: 201 GLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-- 254
            +TE+  G+D+A I ++            + L G KWF S+  +D  ++LA+ +G     
Sbjct: 202 -MTEQAAGSDVARIATRAALETAPDGTQTWRLYGDKWFCSNADADLAMVLARPDGAPSGI 260

Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                FL+P+ L DGS N     RLK+K+G RS A+ E+       +L+G++      + 
Sbjct: 261 NGLALFLLPKTLRDGSRNHYRIVRLKDKLGTRSMASGEIALEGATAYLIGEIGRGFHQMA 320

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           DM  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + L    A 
Sbjct: 321 DMINMSRLSNGVRAAGLMRRATTEALHIARNREAFGRKLIDMPLMQRQLLKMLLPTEQAR 380

Query: 371 ALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           ++  ++A     A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S
Sbjct: 381 SMFMQIAQLLPLADAGDAQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWS 440

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
            AR  R++   SI  G+ N + LD+   +++   L                +  +  L D
Sbjct: 441 DARLVRDAHLGSIWEGTSNIVALDIARAVKREGAL-------------EPLRAHLVGLLD 487

Query: 490 SISLCKEDKGLARFLTEKIA 509
            ++L  +   L R   +++ 
Sbjct: 488 GVTLPAQSDALLRATLDRVC 507


>gi|225435261|ref|XP_002285017.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 405

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 69/396 (17%), Positives = 143/396 (36%), Gaps = 30/396 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ A  N        P   R D+  + P    L +      LH     +      + 
Sbjct: 36  ESIAQFAQEN------IAPHASRIDRTNYFPEEVNLWKLMGDFNLHGITAPEEYGGLGLG 89

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +   A    + S    + +     P   + + PK+ S E+      
Sbjct: 90  YLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGNPAQKQKYLPKLISGEH------ 143

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +  ++  G        W  + P++   ++ A+ 
Sbjct: 144 -------VGALAMSEPNAGSDVVSMKCKADRVDGGYILNGNKMWCTNGPIAQTLVVYAKT 196

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 197 DITAHSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGV 256

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M     L  L  A   +  M+  +   + Y R+R   G  + +   ++  +AD+   +
Sbjct: 257 YVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVRQREQFGRPIGEFQFIQGKLADMYTSL 316

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A + +  K   ++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 317 QSSRSYVYSVARNCENGKIDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVN 369

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E    R  R++    I  G+     + +   L K  
Sbjct: 370 EYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 405


>gi|89894464|ref|YP_517951.1| hypothetical protein DSY1718 [Desulfitobacterium hafniense Y51]
 gi|219668889|ref|YP_002459324.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|89333912|dbj|BAE83507.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539149|gb|ACL20888.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 389

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 140/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P   AL+ +    GL        +            A           
Sbjct: 26  PQAAHTDETHEFPL--ALVHKMRELGLLGIPIPEEYGGAGSDFTSYTLALEEIARGCAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +M+   T  +  +         + + PK+              K  +     LTE   
Sbjct: 84  AVIMAVHTTLGTFPIYYFGNEEQKQKYLPKL-------------AKGEMLGAFALTEPNS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +++ +  ++  D  Y ++G K F+S+   +  + +LA  +   G   +   L D  
Sbjct: 131 GSDASSLVTTAKRRGDH-YVINGSKRFISNTGYAGIYTVLASTDRTKGSRGITAFLVDAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL   + + K+G   ++T EL F +    +    N      +  KI +  LD   + +
Sbjct: 190 TPGLIIGKKEKKMGLHGSSTRELIFEDMVVPV---ENRLGEEGQGFKIAMALLDDGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +       A+ YA+ R      +++   ++  +AD+A  + AA  L ++ A   
Sbjct: 247 GAQAVGIAQAAFEAALAYAQERVQFKQEIMNFQGIQFMLADMAAQLEAARLLVYQAAVRR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E    S+EA+ A       K +  +MA  V  +AM+  GG GY  E  I R+ R++   
Sbjct: 307 VEGVPYSKEASMA-------KLFASEMAVKVTNDAMQIFGGYGYTREYPIERYLRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L  
Sbjct: 360 QIYEGTNQIQRIVIAKHLRN 379


>gi|255527687|ref|ZP_05394545.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296185563|ref|ZP_06853972.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|255508631|gb|EET85013.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|296049691|gb|EFG89116.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|308066799|gb|ADO12110.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 379

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +P     +++    G+      + +          I A           
Sbjct: 26  PLAAEIDETERYPL--ETVKKMAKYGMMGMPIAKEYGGAGGDTLSYILAVEELAKVCATT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +  A ++    T    + +               P+ K       GLTE   
Sbjct: 84  STILSAHTSLCACVIQQFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  SQ     D  Y L+G K F+++   +D F++ A  +   G   +   + +  
Sbjct: 131 GTDSSAQQSQAILEGDH-YILNGQKIFITNGAYADVFVVFAMTDRSKGNKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G  + +++NK+G R+++T EL F +    +   +     G    MK L    +  A  
Sbjct: 190 MPGFSFGKVENKLGIRASSTTELVFEDVKVPVENLIGKEGKGFAVAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EAI Y + R   G  L     +   +A++ + I AA  L ++ A   +  
Sbjct: 250 ALGLAEGALDEAIKYMKERKQFGKTLSRFQGLAWMVAEMDVKIEAARNLVYKAAMRKENG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + +AA A       K +  + A  V  +A++  GG GY ++  + R  R++    I 
Sbjct: 310 LPFTIDAARA-------KLFAAETAMEVTTKAVQLFGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +     K
Sbjct: 363 EGTSQVQKMVISGSRLK 379


>gi|284046148|ref|YP_003396488.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950369|gb|ADB53113.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 384

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 123/375 (32%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P  H L        L    ++               A      A    
Sbjct: 31  PRAAEIDEKAAYP--HDLRELFAELNLFGLPFEPEHGGTGTGVLMLNIAVEEIAKACAST 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++         + L  +  + + + PK  + E+ P                L+E   G
Sbjct: 89  ALMLMVQELGTLPIKLFGSEELQQRFLPKCATGEWTP-------------AFALSEPEAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSP 267
           +D   + ++  +  D         W  +  ++D +I+ A  +   G    +   + + + 
Sbjct: 136 SDPGGMITKAVRDGDEWVINGTKNWISNLGIADFYIVFAVTDPTAGHSRGISAFVVERTR 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G      + K+G R + T +  F +       L+G++N              L  A  +
Sbjct: 196 DGFSVGNHEKKLGIRGSPTGQPIFDDVRIPAENLIGEVNKGMHVALGTLDYSRLGVAAQA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +   A  YAR R   G  +     ++  +AD+    AA   L ++     D   
Sbjct: 256 LGIAQGATDYAAAYARERRQFGKPINAFQGIQFKLADMETQTAAGRELLYQACAKADRGD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                       + + K +    A  V  EA++ +GG GY+ E  + R  R++    I  
Sbjct: 316 VDR------GKYSAMAKLYNSDNAMRVTVEAVQVLGGYGYVNEYPVERMLRDAKITQIYE 369

Query: 445 GSGNAMVLDVLNLLE 459
           G+     + +   L 
Sbjct: 370 GTNEIQRIVIARSLR 384


>gi|206890770|ref|YP_002248410.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742708|gb|ACI21765.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 139/399 (34%), Gaps = 35/399 (8%)

Query: 68  CTAQELARM-ANYNT-PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              ++LAR  A  +  P        GE  WD          +++      +        +
Sbjct: 10  RMIKDLARQIAEEHVLPVRAELDETGEFPWD----------IMKILAQADMFRVFIPSEY 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                  L      + +      + L  T    K + P I      
Sbjct: 60  GGLGTGALELCLVVEELSRVCLGVSTTYAANALGTYPILLFGTEEQKKKYLPDI------ 113

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        +   LTE   G+D   I +   K  D        +W  +   ++ + 
Sbjct: 114 -------ADGKRLVAFALTEPNAGSDAGGIQTTATKDGDYYILNGRKQWITNGGEAEIYT 166

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++A  +   G       + +    G  + + +NK+G R++AT EL F +        L  
Sbjct: 167 VIALTDKSKGARGASAFIVEKGTPGFSFGKKENKMGIRASATRELIFEDCKIPKENMLGR 226

Query: 305 -STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  MK L    +      +   + +  EA  +A++R   G  +I    ++  +AD
Sbjct: 227 EGMGFIVAMKTLDQSRVGVGAQGLGVAQGAFEEAAKFAKQRVQFGQPVISFQAVQHMLAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ I AA AL + +A   D       +A+       + K +   +A  V  +A++ +GG
Sbjct: 287 MAIQIEAARALIYSVARYIDSGAKDITKAS------AMAKTFATDVAMKVTVDAVQVMGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           SGY+++  + +  R++    I  G+       +   + K
Sbjct: 341 SGYMKDYPVEKMMRDAKILQIYEGTNQIQRNVIGQAIIK 379


>gi|157104649|ref|XP_001648505.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108880278|gb|EAT44503.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 404

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 142/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +PA    + +    GL     D  +            A          A
Sbjct: 47  PVAAKIDREHLYPA--EQIEKMGELGLMAVAIDEKYGGTGLDYLAYAIAMEEISRGCASA 104

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     V         + +                           L+E   
Sbjct: 105 GVIMSVNNSLYLGPVDRYGNEEQKQKYVVGYTDG-------------KKVGCFALSEPGN 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++      D         W  ++  +++ ++ A  +  +    +   +     
Sbjct: 152 GSDAGAASTVAVLKGDRWVLNGTKCWITNAYEAESAVVFATTDKSLKHKGISAFIVPRGA 211

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           +G    + ++K+G R ++T +L F +     +   N+   P    KI +  LD+  + ++
Sbjct: 212 SGFTLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGFGFKIAMQTLDAGRIGIA 268

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     +++ IAD++L++ +A  L++R A   D
Sbjct: 269 SQALGIAQASLECAVDYANKRIAFGKPISKLQAIQQKIADMSLNLESARLLTWRAAWLKD 328

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A++ A     +C         + ++ +GG GY+ +    RHYR++    
Sbjct: 329 NKKPYTKEAAMAKLAASEAATFCS-------HQCIQVLGGMGYVSDMPAERHYRDARITE 381

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 382 IYEGTSEIQRLVIAGQIIK 400


>gi|257095856|ref|YP_003169497.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048380|gb|ACV37568.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 378

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 76/392 (19%), Positives = 143/392 (36%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R +  +  Q     P    WD+    PA    LR     G    +    +      
Sbjct: 7   QEMIRESLRDFAQ-ERLAPFAAEWDRHHTFPA--DALRELGELGALGMVVPEQWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
               +               ++S   + A  + +   T    + W               
Sbjct: 64  YMSLVLVIEEIAAGDGATSTIVSVQNSLACGITMKYGTDEQKETWLK------------- 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AAI+++  +  D        ++  +   +   I+ A  
Sbjct: 111 PLARGEMLGCFCLTEPHTGSDAAAISTRADRDGDHFVLNGVKQFITTGKYAQVAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGP 308
           +   G   +   L   +  G    R++ K+G  ++ T ++ F +        L     G 
Sbjct: 171 DKAAGKKGISCFLVPTTTPGYIVARIEEKMGQHASDTAQILFEDCRIPASCLLGREGDGY 230

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L    +  A  SV   R +   A+ YA+ R   G  +I+   +    AD+A  I
Sbjct: 231 RIALSNLEAGRIGIAAQSVGMARAAFDAAVQYAKERVTFGKPIIEHQAVSFRFADMATQI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + +R A   D  K   +EA+ A++       +  +MA  V ++A++ +GG GY+ 
Sbjct: 291 DAARLMVWRAATFKDAGKPCLKEASMAKM-------FASEMAEKVCSDAIQILGGYGYVS 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   +
Sbjct: 344 DFPVERIYRDVRVCQIYEGANDIQRLVIGRAV 375


>gi|302534825|ref|ZP_07287167.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443720|gb|EFL15536.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 385

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 129/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      ++          +            +
Sbjct: 33  PFAAAVDEEARFP--QEALDALVANDLHAVHVPETYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  +   +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEELKAKYL-------------GPLAKGDAMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +SD + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTRAVRDGDFWVLNGVKRWITNAGVSDYYTVMAVTDPEKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +   S
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKIEAARQLTYSAAAKSERVDS 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFFGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|46199085|ref|YP_004752.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|46196709|gb|AAS81125.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27]
          Length = 381

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 148/399 (37%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     ++    P    +D+ E  P    ++ +    GL  +I   
Sbjct: 4   DFSLTEEQRQLQALARRFAKEVIL--PVAREYDEKEEVP--WPVIEKLHEVGLLNAIIPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K   ++        A +    +   S    + V L  T    + +        
Sbjct: 60  EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFL------- 112

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 113 ------RPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEW 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V   +    V  L+ +    G    ++  K+G R++ T EL F +    +   L
Sbjct: 167 VVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRL 226

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M+ L    +  A  SV   R +L EA  YA+ R   G  + +   ++  +
Sbjct: 227 GEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKERQAFGQPIANFQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     +A++  
Sbjct: 287 ADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  + +  R+   N I  G+     L +   +
Sbjct: 340 GGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHI 378


>gi|331269784|ref|YP_004396276.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329126334|gb|AEB76279.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 379

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 129/377 (34%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P    + ++    G+    + + +        ++ +    +       
Sbjct: 26  PIAAETDATGVFPM--EVYKKLGKYGIVGLPYPKEYGGTGGDYLSYILAVEEISKACGTL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GISYSVNTSLCCGAIYQNGTEEQKKKYLPDLCSG-------------KKIGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   +  D  Y L+G K F+++ P+++ F++ A  +   G   +   + +  
Sbjct: 131 GTDASGAQTVAVRDGDN-YILNGQKCFITNSPLAETFVIFAITDRSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G R     E+   +        L     G    MK L    +  A  
Sbjct: 190 FPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +   A  Y + R   G  L     +   +AD+ + I  +  L +  A   ++ 
Sbjct: 250 GLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSRHLLYLAAMDKNDG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  AA A       K  C   A  V  EA++  GG GYI++  + R  R++    I 
Sbjct: 310 RPYSVSAARA-------KLSCTDTAMYVTTEAVQLFGGYGYIKDYPVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|226939920|ref|YP_002794993.1| acyl-CoA dehydrogenase, short chain specific [Laribacter
           hongkongensis HLHK9]
 gi|226714846|gb|ACO73984.1| acyl-CoA dehydrogenase, short chain specific [Laribacter
           hongkongensis HLHK9]
          Length = 384

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 142/382 (37%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P        +  PA   ++ +    GL        +  +      ++  A  L   +   
Sbjct: 25  PRENEVADTDTMPA--DIVEQMKDMGLFGLTIPEEYGGLGVTMEEEVNIAFELGRTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++ + +   +  + L  TP     + P++ S E             +     LTE   
Sbjct: 83  RSYIGTNNGIGSIGILLDGTPEQKDQYLPQLASGE-------------LLSSFCLTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D A++ +   +  D        ++  ++P +  + ++A+    + G   +   + + +
Sbjct: 130 GSDAASLKTTAVRDGDFYVINGTKRFITNAPHASIYTVMARTNPEIKGAGGISAFIVERN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAI 322
             G+   +  +K+G +   T ++ F N        +      G    MK+L    L  A 
Sbjct: 190 TPGVSLGKCDHKMGQKGAHTSDVIFDNVRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +SV      LA+++ YA  R   G  + D  +++  +AD   +I AA  +    A   DE
Sbjct: 250 LSVGAAERMLADSLQYAMERKQFGKPIADFQLIQAMLADSKAEIYAARCMVLDAARKRDE 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++ S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+     I
Sbjct: 310 GRNVSTE-------ASCAKMFATEMCGRVADRGVQIHGGAGYVSEYAIERFYRDVRLFRI 362

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+     + +   + +    
Sbjct: 363 YEGTTQIQQIVIARNMIREAQA 384


>gi|170759663|ref|YP_001788519.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406652|gb|ACA55063.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 379

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 139/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK E +P     + +    G+    + + +          + A           
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +     +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSIAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MPGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKSAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTVDAA-------EAKLYAAETAMYVTNKSLQVLGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + N L
Sbjct: 363 EGTSEVQKMVIANNL 377


>gi|187776881|ref|ZP_02993354.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC
           15579]
 gi|187775540|gb|EDU39342.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC
           15579]
          Length = 379

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 144/375 (38%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGMMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S E                  GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSGE-------------KIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSVAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVRGISAFILEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
            +G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  A+ Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVEAAKYLVYKSAWKKSTG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTMDAA-------EAKLYAAETAMYVTNKSLQVLGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + N L
Sbjct: 363 EGTSEVQKMVIANNL 377


>gi|90411314|ref|ZP_01219326.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
 gi|90327843|gb|EAS44174.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
          Length = 396

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 88/419 (21%), Positives = 154/419 (36%), Gaps = 40/419 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A      L    P    WD+    P    +L+ +   G        
Sbjct: 2   DFELNEDQRAFAETARQFA--LERLSPMAAEWDEKHIFP--KDVLKEAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+       M+A   T     ++ P++ + +
Sbjct: 58  EQGGLALSRLDSSIIFEQLAMGCTSTTAFMTIHNMVTWMIASFATDEAKAEYCPQLITGD 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
           +                  LTE   G+D AA+T+  +K+  G Y L+G K F+S    +D
Sbjct: 118 W-------------LGSYCLTEPNAGSDAAALTTSAKKVK-GQYILNGAKTFISGAGETD 163

Query: 242 AFIMLAQV-----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +++A+            E + G   +   +      G+ Y R + K+G  S  T  + 
Sbjct: 164 VLVVMARTVNEDQGSNKKAEHKSGAKGISAFIVPVDATGITYGRKEPKMGWNSQPTRSIT 223

Query: 291 FSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N        L     G    MK L    ++ A  SV   + +L +A  Y   R   G 
Sbjct: 224 FDNVAIPARNLLGQEGEGFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGK 283

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L     ++  +AD+A ++ AA  L    A+  D           A     + K +   +
Sbjct: 284 SLAQFQGLQFKLADMATELVAARQLVRYAASKLDRQDPE------ATAYCAMAKRFATDI 337

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
              V  +A++  GG GYI+E  + R++R+   + IL G+   M L +   LL +GT + 
Sbjct: 338 GFTVCDQALQLYGGYGYIKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396


>gi|187779164|ref|ZP_02995637.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC
           15579]
 gi|187772789|gb|EDU36591.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC
           15579]
          Length = 377

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTDEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGDH-YILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EA+ Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAVKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|330829883|ref|YP_004392835.1| acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565]
 gi|328805019|gb|AEB50218.1| Acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565]
          Length = 385

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 146/380 (38%), Gaps = 27/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWDK    P     ++++   G         F  +   +           M     
Sbjct: 26  PHAARWDKEHEFPI--PTIKQAAGLGFCGLYTPEPFGGLGLPRLDASLIFERLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     + M+       V K+W PK+ S E             +     LTE   G
Sbjct: 84  TAYLTIHNMVSWMLGNWLPTEVAKEWVPKLASGE-------------LLGSYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y + G K F+S    SD  +++A+  G  G   +   +   + 
Sbjct: 131 SDAAALKTRAVREGD-CYLIEGTKVFISGAGSSDVLVVMARTGGE-GAKGISAFMVPANA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+ Y + + K+G  S  T E+ F+       + LG+                ++ A  S
Sbjct: 189 PGVSYGKAEEKMGWNSQPTREVVFNGVRIPASYRLGEEGEGFKFAMQALDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L +A+ Y ++R   G  + +   ++  +AD+A ++AAA  L  + A+  D   
Sbjct: 249 VGTAQQALDDALAYVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAADKLDRGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                         + K +   +   +  EA++  GG GYI E  + R+ R++  + IL 
Sbjct: 309 PDKSA------WCAMAKRFATDVGYRICDEALQLFGGYGYIREYPLERYLRDTRVHRILE 362

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+   M L +   +     L
Sbjct: 363 GTNEVMRLIIARRMLADPGL 382


>gi|297184171|gb|ADI20290.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 381

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 117/305 (38%), Gaps = 23/305 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +P     + P++ S E             +     L+E   G+D  +  +  
Sbjct: 95  CWGLEAFGSPEQKAKYLPRLASGE-------------IIGSFCLSEPEAGSDATSQATTA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             + D         W  +    +  +++AQ +   G   +  L+ +    G    + ++K
Sbjct: 142 VDMGDHYLLNGTKNWITNGGTCEITLVIAQTDREKGHRGINALIVEKGMEGFVVGKKEDK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335
           +G R + T  L F++        +     G    MK L    +  A  ++   + +L  A
Sbjct: 202 LGIRGSDTHTLLFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAQGALDLA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  + +   +   +AD+ + I  A  L ++ A   D+     +E+A A++
Sbjct: 262 LSYSKERTTFGKPIHEHQAIAFKLADMEMKIEQARLLVYKAAWLKDQGMPYDKESAMAKL 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A        + A  V  EA++  GG G+++E  + R  R++    I  G+     + + 
Sbjct: 322 AA-------SEAAMWVSTEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQRIVIS 374

Query: 456 NLLEK 460
             + K
Sbjct: 375 RDMIK 379


>gi|260555418|ref|ZP_05827639.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411960|gb|EEX05257.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 384

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     L +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQLIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|71065461|ref|YP_264188.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038446|gb|AAZ18754.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 386

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 144/385 (37%), Gaps = 33/385 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    ++++S   G      +  ++ +   +                 
Sbjct: 26  PNAAEWDRTSHFPI--DVIKKSGELGFLGLYANPEYDGLGLPRLDSAMVFEELAWGDTAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS    +  M+    +  + K + P + S E+                  LTE   G
Sbjct: 84  AAYMSIHNMAGWMIGEFGSDALCKKYLPNMVSGEW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K     Y L+G K F+S   S D  +++A+  G  G   +   + D   
Sbjct: 131 SDAASLRTKADKQG-EYYVLNGEKTFISGAGSTDVLVVMART-GGAGPKGISAFVVDADS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G+ Y + ++K+G ++  T  + F +    +    N+     +  +I +       ++  
Sbjct: 189 AGIEYGKNEHKMGWKAQPTRTISFKDVKVPV---ENLIGEEGQGFRIAMKGLDGGRINIG 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +V   + +L  A +Y + R   G  +     ++  +AD+      A  + +  A+  D
Sbjct: 246 ICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLYLAASKVD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +      A     + K     +   V  EA++  GG GY+ E  + RH R+   + 
Sbjct: 306 NNDVQ------ASTYCAMAKRLSTDLCFDVANEALQLHGGYGYLNEYPLERHVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFE 466
           IL G+   M + V   L +   L +
Sbjct: 360 ILEGTNEIMRVIVSRQLLQDEALSQ 384


>gi|114766433|ref|ZP_01445402.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541374|gb|EAU44422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601]
          Length = 593

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 95/538 (17%), Positives = 194/538 (36%), Gaps = 75/538 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           + L     +    E A++A      L+      G   +   V     +H    +    G 
Sbjct: 30  DELDRDTTAAILDEAAKLAENVLAPLNPVGDAQGCTLENGVVRTPEGFHDAFNQMREGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +               ++  A +        +  + + +    +      + 
Sbjct: 90  PALDCDPEYGGQGLPYLVSTAVGEMFSSANMAFNMYQGLTHGAYNAIHAHGSEEQKATYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K ++
Sbjct: 150 PKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTKAEPQEDGTYKITGSKIWI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       +  F+VP+ + +     G  N +    L++K+
Sbjct: 197 SAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFMVNADGSRGDRNAVSCGGLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    GFL+G+ +     +  M     L   +   +   V+   A+ +A
Sbjct: 257 GIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGYAQGAVAYQNALGFA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               ++  P ++R + D       A A  F  A+  D+A   
Sbjct: 317 KDRLQ-GRDVTGAKNPEGPADSIMVHPDVRRNLMDQKALTEGARAFVFWGASLIDQAHRS 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +           A + +GGSG+  E  + +  R++    I  
Sbjct: 376 GDKDAEGLISLLTPVIKGFLTDKGFETAVLAQQTLGGSGFTREWGLEQFVRDARITMIYE 435

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           G+     LD++   L + G       F  +++ +                  +++   A+
Sbjct: 436 GTNGIQSLDLVGRKLAQDGGKHVMAFFDMVKRFIAEH-------------KGQDEAFDAQ 482

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           FL     L +++  L +AGM      F++N       + +  L G ++  H+   + L
Sbjct: 483 FLE---PLKAASKDLQQAGM-----FFMQN----GMKTPNEALSGSYDFMHLFGHVCL 528


>gi|149201324|ref|ZP_01878299.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035]
 gi|149145657|gb|EDM33683.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035]
          Length = 592

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 96/494 (19%), Positives = 180/494 (36%), Gaps = 67/494 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +     +    G         F               ++  A          + 
Sbjct: 71  VRTPKGFKEAFEQMKEGGWTALDLPEEFGGQYMPYILGTAVGEMFSAANQAFTMYQGLTH 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +AS + +  +      + PK+ + E+  T             + LTE   GTD+  + +
Sbjct: 131 GAASAILVHGSEDQKATYLPKMANCEWTGT-------------MNLTEPHCGTDLGLMRT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED- 264
           + +   DG Y L+G K F+SS   D       ++LA++ G       V  F+VP+ +   
Sbjct: 178 KAEPQGDGSYKLTGQKIFISSGEHDMADNIIHLVLAKIPGGPEGIKGVSLFIVPKFIVKE 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+   +++ K+G   N+T  + +    G+LLG+ +     +  M     +  
Sbjct: 238 DGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEHKGMRAMFTMMNEARIGV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  ++   V+   A+ YA+ R                  LI  P ++R++ D    I  
Sbjct: 298 GMQGLAQAEVAYQNALAYAKDRLQGRAVTGTENPNGPADPLIVHPDIRRSLMDQKSFIEG 357

Query: 369 ATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A A     A   D +   ++ AA     +M P+ K +       +   A +  GG GYIE
Sbjct: 358 ARAFMLWGAELIDRSHRGNDAAAEGLISLMTPVIKGFLTDEGYDMTVLAQQIYGGHGYIE 417

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  +++  R++    I  G+     LD++                L QD G   K V+  
Sbjct: 418 EWGMSQFTRDARIAMIYEGANGVQALDLVG-------------RKLAQDGG---KHVMAF 461

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
                +  KE++G      + +    +A+   +A     A  F++N       + +  L 
Sbjct: 462 FELVKTFLKENEGNEALKADFLDPLKAASKDLQAS----AMFFMQN----GMKNPNAALS 513

Query: 547 GRFNAAHIIDSLYL 560
           G ++  H+   + L
Sbjct: 514 GSYDFMHLFGHVCL 527


>gi|225387070|ref|ZP_03756834.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme
           DSM 15981]
 gi|225046814|gb|EEG57060.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme
           DSM 15981]
          Length = 388

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 134/363 (36%), Gaps = 26/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L  +    G         +        A+ +       +  + + +  +P+   +  +
Sbjct: 46  WDLHYKMAKYGFMGIKLPVEYGGQGGDTLAYVLMVEEFARVCPVLSIYANTPNSLGSGPL 105

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   K + P + S E               I   LTE   G+D     ++  K  
Sbjct: 106 LTCGTPEQKKKYIPPLASGE-------------KKIVFALTEPGAGSDAGGTLTRAVKDG 152

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
              Y LSG K F+S  P++D  ++ A+      G   +   + D    G+   + + K+G
Sbjct: 153 -EYYILSGRKCFISGAPLADYAVIYAKTNPALKGSKGISMFIVDMKLPGVSLGKPELKMG 211

Query: 281 NRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
                T ++   N        L     G    +K L    L  A  S+   +  L E+I 
Sbjct: 212 INGYPTSDIILENVRVHESDLLGPPDKGFSTALKTLDGGRLGVAAQSLGIAQCCLEESIR 271

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +     +   IAD+A +I AA  + +  A + D  +        A +  
Sbjct: 272 YAKERRQFGRPIAKFQAISFMIADMATEIEAAREMIYSTALAKDAGEKD------APMKC 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +  +MA  V  +A++  GG GY+ +  + R YR++   +I  G+     + +   
Sbjct: 326 SMCKLFASEMANRVAYKAVQIHGGYGYMRDYKVERMYRDARITTIYEGTSQVQQMVIAGN 385

Query: 458 LEK 460
           L K
Sbjct: 386 LLK 388


>gi|322796936|gb|EFZ19288.1| hypothetical protein SINV_12082 [Solenopsis invicta]
          Length = 401

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 144/383 (37%), Gaps = 32/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P     +++    GL       +             A          A
Sbjct: 43  PIAAETDKKHLFP--KEQIKKMGELGLMGLCVPEALGGTGLDYLAYAVAMEEISRGCASA 100

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     +    T +  + +     S E                   L+E   
Sbjct: 101 GVIMSVNNSLYLGPIDAFGTDKQKEKYIVPFTSGE-------------KVGCFALSEPGN 147

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +             W  +   + A ++ A  +       +  +L D   
Sbjct: 148 GSDAGAASTTAKLNGSVYTINGTKSWITNGFEASAIVLFATTDKSKKHKGISAILVDSPT 207

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +     +   N    P    KI ++ LD+  + ++
Sbjct: 208 AGLSLGKKEDKLGIRGSSTCSLIFEDCQ---MPQDNTLGKPGMGFKIAMMTLDAGRIGIA 264

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A+     A+ YA +R   G  +I    +++ IAD+AL + ++  L++R A   D
Sbjct: 265 GQALGIAQASLDCAMDYANKRQAFGQSIIKLQTIQQKIADMALKLESSRLLTWRAAQLKD 324

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    RHYR++    
Sbjct: 325 SGKPYTKEAAMAKLSASETATFC-------AHQCIQILGGMGYVSDMPAERHYRDARITE 377

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K   L
Sbjct: 378 IYEGTSEIQKLVIAANLVKEYGL 400


>gi|126733241|ref|ZP_01748988.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2]
 gi|126716107|gb|EBA12971.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2]
          Length = 591

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 103/539 (19%), Positives = 191/539 (35%), Gaps = 73/539 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIH 112
              E L     S   +E  ++A      L+      G   +   V     +     +   
Sbjct: 27  PGFEDLDRDFTSAVVEEAGKVATEVLHPLNVVGDTEGCVMENGVVRTPTGFKEAFAQMKE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +            A   ++ A +        +  + S +    +    +
Sbjct: 87  GGWTAMDCDPEYGGQGLPYVMHTAAQEPFVSANMAFNMYQGLTHGAYSAIYAHGSDEQKQ 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++     DG Y +SG K
Sbjct: 147 KYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPNGDGSYKISGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA+++G       V  F+VP+ + +     G  NG+   +++
Sbjct: 194 IFISAGEHDMADNIIHLVLAKIQGGPEGIKGVSLFIVPKFMVNDDGSLGQRNGVACGKIE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   N+T  + +    GFL+G+ +     +  M     L   +   +    +   A+
Sbjct: 254 EKMGIHGNSTCVMNYDEATGFLVGEEHKGMRAMFTMMNEARLGVGLQGYAQAESAYQNAV 313

Query: 337 HYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            YA  R   G               LI  P ++R + D    +  A A +F  A   D A
Sbjct: 314 AYANDRLQ-GRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFVEGARAFTFWGAYLIDRA 372

Query: 384 KSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +  A     +M P+ K +           A +  GG GYIEE  ++++ R++    
Sbjct: 373 HKNEDADADGLISLMTPVIKGFLTDKGFEYATAAQQVYGGHGYIEEWGMSQYARDARIAM 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD++                L QD G        +++  I   + ++ L 
Sbjct: 433 IYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFEMIKTFIKENEGNEALN 479

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +       L +++  L  AGM           F+ N    +  L G ++  H++  + L
Sbjct: 480 KEFL--TPLKAASKDLQAAGM----------YFMQNATKPNNALSGSYDFMHMMGHVCL 526


>gi|227485266|ref|ZP_03915582.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236726|gb|EEI86741.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 378

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 144/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     + +    G     +D  +  +       I        A    
Sbjct: 25  PIAIEIDENHRFPE--ENVAKMQELGFFGIPFDEEYGGIGLDTLTYILCVEELSKACAST 82

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A  +         + +   + S E                   LTE   
Sbjct: 83  GVIVSAHTSLCADCINKFGNEEQKEKFLTPLASGE-------------KLGAFALTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 130 GTDASGQKTVAVKDGDE-YVLNGSKIFITNAGHADTYVVFAMTDKSQGTKGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G  +   ++K+G ++++T+EL F +        L       +    +  LD   + ++
Sbjct: 189 TPGFNFGAKEDKMGIKASSTMELVFQDCRIPAANLLGEEGKGFKY--AMQTLDGGRIGIA 246

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE     AI Y + R   G  +      +  +A++A+DI +A  L ++ A   D
Sbjct: 247 AQALGIAEGALNKAIKYVKERQQFGRPIAKFQNTQFKLAEMAIDIESARHLVYKAATLKD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S +  AA A++ A        ++A  V  +A++  GG GY +E  + R  R++    
Sbjct: 307 AGESYTVAAAEAKLKAA-------RVAMDVTTKAVQLFGGYGYSKEYEVERMMRDAKITE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+   M++ V   L +
Sbjct: 360 IYEGTSEVMLMVVGGSLLR 378


>gi|168183859|ref|ZP_02618523.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|237795619|ref|YP_002863171.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|182673115|gb|EDT85076.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf]
 gi|229262853|gb|ACQ53886.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 377

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 123/319 (38%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T    + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTEEQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      +  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGNH-YILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 EGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|158319223|ref|YP_001511730.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158139422|gb|ABW17734.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 378

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 138/380 (36%), Gaps = 33/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           GP     DK    P       + +  G         +         K+            
Sbjct: 25  GPIAAEVDKTGRFP--RETFDKMVKIGFTGIGTPVEYGGSGGNDIDKVIVVSEIAKKCAA 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              ++S     + +V    T    + + P++ S                     LTE   
Sbjct: 83  TAAILSIHSIFSHVVHKFATEEQKQKYLPQVTSG-------------GCLAAFALTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A  +      D  Y L+G K F+S+   +   ++ A  +   G   +  +L +  
Sbjct: 130 GSDAGAAKTTAILDGDE-YVLNGTKCFISNGGQAQHLLIFALTDPSKGLKGLSCILVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G    ++++K+G   + TVEL F N         N+     +   I +  LDSA + V
Sbjct: 189 TPGFTIGKIEDKMGINGSETVELIFDNCRVP---KENLIGKEGKGFMIAMNALDSARIGV 245

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               + +A     E++ Y + R   G  L     +   I+D+A    AA  L +  A+  
Sbjct: 246 GAQALGIAESALEESVKYMKERVQFGKPLTALQGLTWYISDMATKTEAAKWLVYHAAHLK 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              ++ ++EAA A++ A        + A  V   A++  GG GY+++  + R YR++   
Sbjct: 306 ATGENHTKEAAMAKLNAA-------ETARHVTNLALQIHGGYGYMKDYPLERMYRDAKIT 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   + +
Sbjct: 359 EIYEGTSEIHKLVISRAVLR 378


>gi|153938986|ref|YP_001391489.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152934882|gb|ABS40380.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           Langeland]
 gi|295319513|gb|ADF99890.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str.
           230613]
          Length = 377

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T +  + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTDKQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGETTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|170722619|ref|YP_001750307.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760622|gb|ACA73938.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 375

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 141/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK    P     ++     GL   +    +            A           
Sbjct: 24  PFAEQWDKEHRFP--REAIQEMAELGLFGMLVPEQYGGSDTGYVAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L   +    + +              AP+   S+     LTE + 
Sbjct: 82  STIMSVHNSVGCVPILKFGSELQKQQYL-------------APLASGSMIGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +++ ++ +   D  Y L+G K F++S   +   I+ A  +   G   +   +    
Sbjct: 129 GSDASSLKTRARLDGD-YYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIVPTD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G    R+++K+G  ++ T ++ F N    +   L     G    +  L    +  A  
Sbjct: 188 LPGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLGEEGQGYKIALANLEGGRIGIASQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   R +   A  YA+ R   G  LI+   +   +AD+A  IA A  +    A   D  
Sbjct: 248 SVGMARAAFEVARDYAKERCSFGKPLIEHQAVAFRLADMATKIAVARQMVLHAAALRDAG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    EA+ A       K +  +MA  V ++A++ +GG GY+ +  + R YR+     I 
Sbjct: 308 RPALVEASMA-------KLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIY 360

Query: 444 LGSGNAMVLDVLNLL 458
            G+ +   + +   L
Sbjct: 361 EGTSDIQRMVIARNL 375


>gi|157104647|ref|XP_001648504.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108880277|gb|EAT44502.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 405

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 148/381 (38%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+ +F+PA    +  +   GL   + D  +        ++  A  +  +++   
Sbjct: 48  PIAAKVDREQFYPAEQVAM--AGDLGLMSIVLDEKYGGTGLD--YQAYAIAMEEISRGSP 103

Query: 149 GHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + S+ ++  + L     T    + + P                         L+E 
Sbjct: 104 VVGGTMSIHNSLYLGLLEKYGTEDQKQRFIPGYTDG-------------RKIGCFALSEP 150

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D  A ++      D         W      +   I+ A  +  +    +   +   
Sbjct: 151 GNGSDAGAASTTATLKGDRWVLNGTKCWISGGYEAGNAIVFATTDKSLKHKGISTFVVPM 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G+   + ++K+G R ++T +L F +     +   N+   P    KI +  LD+  + 
Sbjct: 211 DSKGISRGKKEDKMGLRGSSTCQLIFEDC---EIPKDNLLGQPGYGFKIAMQGLDTGRIG 267

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++G  + +A+     A+ YA +R   G  +     ++  IAD++L + +A  L++R A  
Sbjct: 268 IAGQALGIAQASLECAVDYANKRVAFGKPISKLQAIQMKIADMSLRVESARLLTWRAAWL 327

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    R+YR++  
Sbjct: 328 KDNKKPFTKEAAQAKLAASETATFC-------AHQCIQILGGMGYVSDMPAERYYRDARI 380

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     L +   + K
Sbjct: 381 TEIYEGTSEIQRLVIAGQVIK 401


>gi|88802197|ref|ZP_01117724.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781055|gb|EAR12233.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 380

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 133/374 (35%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER +K EF      L+R+    G    +    +          + A          A  +
Sbjct: 30  ERDNKQEFP---QELVRKMGALGFMGIMVAPEYGGSGMDTISYVLAMEELSKIDASASVI 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +S  +      +    +    + +  K+ + EY                  L+E   G+D
Sbjct: 87  VSVNNSLVCYGLQSYASEAQKQKYLTKLATGEY-------------VGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +  +   D         W  S   +D ++++AQ +   G   +   + +    G 
Sbjct: 134 ATSQATTAEDKGDHYLLNGTKNWITSGGRADVYLVMAQTDREKGHKGINAFIVEKGAEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G R + T  L+F++        +     G    MK L    +  A  ++  
Sbjct: 194 HVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGADGFGFTFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                  A+ Y++ R   G  + +   +   +AD+  +I AA  L  + A   D   +  
Sbjct: 254 AAGGYELALKYSKERKAFGTEICNHQAIAFKLADMYTEIEAARMLVMKAAWDKDNGHNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A A       K +  K+A     EA++  GG+G++++  + R  R++    I  G+ 
Sbjct: 314 MSSAMA-------KLYASKVAMEQTIEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEKG 461
               + +   L +G
Sbjct: 367 EIQKIVISRGLIRG 380


>gi|227498681|ref|ZP_03928825.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904137|gb|EEH90055.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 635

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 141/372 (37%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P    +++    +G     + + +            A           G ++S 
Sbjct: 32  DKESKFPT--EIVKEMGENGWMGLPYPKEYGGAGMDYIAYAIAVEELARVDGGVGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +               P+ K       GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +         + L+G+K F+++   +D +++ A  +   G   +   + +    G  +
Sbjct: 137 TETTAVFDG-KNWILNGNKIFITNGGEADTYVVFAVTDPDAGTRGISAFILEKGMPGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS+AT EL F+N         N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSATAELIFNNVKVP---QENLLGRLGQGFKIAMATLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A++Y++ R   G  +     +   +AD+A  + AA  L +  A    E    
Sbjct: 253 IAQGAYEAALNYSKERIQFGAPICQNQGVSFKLADMATRLRAARFLVYSAAEMKTEHMDY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             ++A A       K +   +A  +  +A++  GG+GY++   I R YR++   +I  G+
Sbjct: 313 GMQSAMA-------KLYASDLAVEITNDALQIFGGTGYLKGMDIERMYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLL 458
                + +   +
Sbjct: 366 NEIQRVVIAAHI 377


>gi|93006342|ref|YP_580779.1| butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
 gi|92394020|gb|ABE75295.1| Butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 386

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 144/385 (37%), Gaps = 33/385 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    ++++S   G      +  ++ +   +                 
Sbjct: 26  PNAAEWDRTSHFPI--DVIKKSGELGFLGLYTNPEYDGLGLPRLDSAMVFEELAWGDTAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS    +  M+    +  + K + P + S E+                  LTE   G
Sbjct: 84  AAYMSIHNMAGWMIGEFGSDTLCKKYLPNMVSGEW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K     Y L+G K F+S   S D  +++A+  G  G   +   + D   
Sbjct: 131 SDAASLRTKADKQG-EYYVLNGEKTFISGAGSTDVLVVMART-GAAGPKGISAFVVDADS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G+ Y + ++K+G ++  T  + F +    +    N+     +  +I +       ++  
Sbjct: 189 AGIEYGKNEHKMGWKAQPTRTISFKDVKVPV---ENLIGEEGQGFRIAMKGLDGGRINIG 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +V   + +L  A +Y + R   G  +     ++  +AD+      A  + +  A+  D
Sbjct: 246 ICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLYLAASKVD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A     + K     +   V  EA++  GG GY+ E  + RH R+   + 
Sbjct: 306 NND------AQASTYCAMAKRLSTDLCFDVANEALQLHGGYGYLNEYPLERHVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFE 466
           IL G+   M + V   L +   L +
Sbjct: 360 ILEGTNEIMRVIVSRQLLQDDALSQ 384


>gi|170761146|ref|YP_001787571.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408135|gb|ACA56546.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3
           str. Loch Maree]
          Length = 377

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T +  + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTDKQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|169826482|ref|YP_001696640.1| acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           sphaericus C3-41]
 gi|168990970|gb|ACA38510.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus
           sphaericus C3-41]
          Length = 390

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 130/375 (34%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+           ++    GL    +   +        ++ +    +       
Sbjct: 36  PYAREVDETSTMRI--ESFKKMAELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGT 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    ++W               P+ K       GLTE   
Sbjct: 94  GLSYAAAVSLGASPIYNFGTEEQKQEWL-------------VPLAKGETLGSFGLTEPNA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A    R  G  ++  ++   +
Sbjct: 141 GSDAGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAVTGKREDGKKIISSIIVPTN 200

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+      +K+G R + T E+   N       LLGD         +      +  A +
Sbjct: 201 TPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRSNLLGDEKRGFSQFLNTLDGGRISIAAL 260

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +  +A+ +A+ R   G  +     ++  +AD+A++I  A  L  + A   D+ 
Sbjct: 261 SVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKLADMAMEIELARTLVHKAAWLKDQK 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +EAA A       K +  +M      +A++  GGSGY++E  + RH R+     I 
Sbjct: 321 KPFGKEAAMA-------KLFASEMGFRTCNQAIQIHGGSGYMKEYDVERHLRDIKLMEIG 373

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  L+
Sbjct: 374 EGTSEIQRLVISRLI 388


>gi|146299692|ref|YP_001194283.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146154110|gb|ABQ04964.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 380

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 151/400 (37%), Gaps = 36/400 (9%)

Query: 67  SCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           S  AQ +   A  N  P +         WD+ +  P    L ++    G    +    + 
Sbjct: 10  SMIAQSIKDFAEKNIKPYIM-------EWDEAQIFPV--DLFKKLGEMGFMGVLVPEEYG 60

Query: 126 PVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                   +      +  +       + + +    + +         K + PK+ + E+ 
Sbjct: 61  GSGLGYHEYITVVEEISKVDPSIGLSVAAHNSLCTNHILTFGNEEQKKKYLPKLATAEF- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF 243
                           GLTE   G+D   + +   K  D  + ++G K F++  +S D  
Sbjct: 120 ------------IGAWGLTEHNTGSDAGGMNTTAVKDGD-FWIINGAKNFITHAISGDVA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +++ +   +     +   + +    G    + +NK+G R++ T EL F          L 
Sbjct: 167 VVIVRTGEKGDSKGMTAFVLEKGMAGFSSGKKENKLGMRASETAELVFDGCRVPDANRLG 226

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            V  G V+ MKIL    +    +S+   + +   A+ Y++ R+  G  + +   +   +A
Sbjct: 227 EVGQGFVQAMKILDGGRISIGALSLGISKGAYEAALKYSKERYQFGQPISNFQGISFKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I A+  L  + A    + K  +   A A++       +  +    +  EA++  G
Sbjct: 287 DMATEIEASELLLHKAAYLKQQHKPVTTSGAMAKM-------YASEACVKIANEAVQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY ++  + + YR+S   +I  G+     L +   L K
Sbjct: 340 GYGYTKDFPVEKFYRDSKLCTIGEGTTEIQKLVISRNLLK 379


>gi|83945478|ref|ZP_00957825.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851054|gb|EAP88912.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 390

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 137/382 (35%), Gaps = 26/382 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D  +  PA   L  +    GL     +  +         H I    +   +
Sbjct: 31  HIAPRAAEIDAKDEFPA--DLWTKMGELGLLGLTVEEEYGGSGLGYVEHCIAMEEISRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + + L  +    + + PK+ S E+                L ++E
Sbjct: 89  ASVGLSYGAHSNLCVNQIRLNGSEEQKRKYLPKLISGEH-------------VGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  +  K  D         W  + P +D  ++ A+ +   G   +   L +
Sbjct: 136 PGAGSDVVSMRLKAVKKGDHYVLNGNKMWITNGPSADTLVVYAKTDPEAGSKGITAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L    G V  +   +  + A+++
Sbjct: 196 KGMKGFSIAQKLDKLGMRGSETGELVFEDCEVPEENVLGQVGGGVRVLMSGLDYERAVLA 255

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V  M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D
Sbjct: 256 SGPVGIMQACMDVVMPYVHERKQFGQPIGEFQLIQGKIADMYTRMNASRAYVYAVAQACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+  ++AA           +  + A     +A++ +GG+GYI E    R  R++    
Sbjct: 316 AGKTTRQDAAG-------VILFAAEAATQCALDAIQILGGNGYINEYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 369 IGAGTSEVRRMLIGRELFNATR 390


>gi|167581276|ref|ZP_02374150.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 593

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 140/517 (27%), Positives = 234/517 (45%), Gaps = 36/517 (6%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRA-SDELDRLASRADKNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRGDAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++   ++  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRETSADGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVN 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLDTLDAARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  SA+ALY A    +
Sbjct: 485 RALDRASDAIAHVAQTGDDAFVRQSASALYHAATAIL 521


>gi|328886014|emb|CCA59253.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 383

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 133/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      ++          +        A   +
Sbjct: 31  PFAAAVDEEGRFP--QEALDALVANDLHAVHVPETYGGAGADALATVIVIEEVARACGSS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  +   +               P+ K        L+E   G
Sbjct: 89  SLIPAVNKLGSLPVILSGSEELKHKYL-------------GPLAKGDAMFSYALSEPDAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 136 SDAAGMKTRAVRDGDFWILNGVKRWITNAGVSEYYTVMAVTDPDKRSKGISAFVVEKSDE 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 196 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAI 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A     AKS
Sbjct: 256 GIAQGALDYAKGYVKERKQFGKPIADFQGVQFMLADMAMKLEAARQLTYAAA-----AKS 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A   K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 311 ERVDGDLTFFGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 369

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 370 TNQVQRIVMARNL 382


>gi|297157918|gb|ADI07630.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 386

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 133/373 (35%), Gaps = 19/373 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      S+          +            +
Sbjct: 29  PHAAEVDEEARFP--QEALEALVANDLHAVHVPESYGGAGADALATVIVIEEVARVCASS 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +              AP+ K        L+E   G
Sbjct: 87  SLIPAVNKLGSLPVILSGSEELKKKYL-------------APLAKGDAMFSYCLSEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 134 SDAAGMKTKAVRDGDHYVLNGVKRWITNAGVSEYYTVMAVTDPDKRSKGISAFVVEKSDP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 194 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A   +   +
Sbjct: 254 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKLEAARQLTYAAAARSERVAA 313

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S +       A   K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 314 GSGKEDLTFFGAA-AKCYASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 372

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 373 TNQVQRIVMARNL 385


>gi|56477494|ref|YP_159083.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum
           aromaticum EbN1]
 gi|56313537|emb|CAI08182.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum
           aromaticum EbN1]
          Length = 377

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 137/392 (34%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R +     Q     P    WD+    P     L+     G    +    +      
Sbjct: 7   QEMIRDSLRAFAQ-ERLAPFAAEWDRNHTFP--REALKELAELGALGMVVPEQWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               + A             ++S   + A  +     +    + W   + S         
Sbjct: 64  YVSLVLALEEIAAGDGATSTIVSVQNSLACGIPNRYGSDAQKEQWLKPLASG-------- 115

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                 +     LTE   G+D +A+ +   +  D        ++  +   +D  I+ A  
Sbjct: 116 -----RMLGCFCLTEPHVGSDASALKTTAVRDGDSWVINGVKQFITTGREADVAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGP 308
           +   G   +   L   +  G    R++ K+G +++ T ++ F +        L     G 
Sbjct: 171 DKTAGKKGISCFLVPTNTPGYIVARIEEKMGQKASDTAQILFEDCRVPADALLGAEGEGY 230

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L    +  A   +   R +L  A+ YA  R   G  + +   +   +AD+A  +
Sbjct: 231 RIALSNLEAGRIGIAAQCLGMARAALEAAVKYAHERETFGKPIFEHQAVNFRLADMATQL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D  +   +EA+ A       K +  +MA  V ++A++  GG GY+ 
Sbjct: 291 EAARQLVWHAASLKDAGRPCLKEASMA-------KLFASEMAEKVCSDAIQVHGGYGYVT 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   L
Sbjct: 344 DFPVERIYRDVRVCQIYEGASDIQRLVIGRAL 375


>gi|241663140|ref|YP_002981500.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240865167|gb|ACS62828.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 587

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 134/500 (26%), Positives = 221/500 (44%), Gaps = 48/500 (9%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N +  D  L  L+  +           +L+ LG+ V S      A  A++N PQ
Sbjct: 20  PDSRGINFFHVDPDLGRLLRLYLGDAPYRELEPQLKSLGQRV-SDELDAWAISADHNPPQ 78

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L      GE    ++ HP + AL R +  + GL       +  P        ++ A  YL
Sbjct: 79  LRHRTRRGEALQTIDKHPDYVALERVAYAELGLASMSHVGNASPP------LVKYALTYL 132

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             Q E G     S+T +    L     P +   + P + SR++D   +  M         
Sbjct: 133 FVQAEFGLCCPVSMTDSLTRTLRKFGDPALLARYLPMLASRDFDVLYQGAMF-------- 184

Query: 201 GLTEKRGGTDIAAITSQGQ----KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-- 254
            +TE+  G+D+A I ++            + L G KWF S+  +D  ++LA+ +G     
Sbjct: 185 -MTEQAAGSDVARIATRAALETAPDGTQTWRLYGDKWFCSNADADLAMVLARPDGAPSGI 243

Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                FL+P+ L DGS N     RLK+K+G RS A+ E+       +L+G++      + 
Sbjct: 244 NGLALFLLPKTLRDGSRNHYRIVRLKDKLGTRSMASGEIALEGATAYLIGEIGRGFHQMA 303

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           DM  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + L    A 
Sbjct: 304 DMINMSRLSNGVRAAGLMRRATTEALHIARNREAFGRKLIDMPLMQRQLLKMLLPTEQAR 363

Query: 371 ALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           ++  ++A     A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S
Sbjct: 364 SMFMQIAQLLPLADAGDAQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWS 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
            AR  R++   SI  G+ N + LD+   +++   L                +  +  L D
Sbjct: 424 DARLVRDAHLGSIWEGTSNIVALDIARAVKREGAL-------------EPLRAHLVGLLD 470

Query: 490 SISLCKEDKGLARFLTEKIA 509
            ++L  +   L R   +++ 
Sbjct: 471 GVTLPAQSDALLRATLDRVC 490


>gi|301061924|ref|ZP_07202654.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444028|gb|EFK08063.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 380

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 141/401 (35%), Gaps = 41/401 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + ++    +E AR +    P        GE        PA    L++    GL       
Sbjct: 9   QRMIRAMVREFARESVL--PTAAERDLTGE-------FPA--QNLKKMGALGLLGMNAPV 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSR 181
            +            A +    A      +MS   + A   + L  +  +   +  ++ + 
Sbjct: 58  EYNGAGVDTVSYCLALQEIAYACASTAVIMSVHNSVACGPINLFGSDHLKDKYLKRLATG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +     LTE   G+D  +  ++  +  D         +  +   S 
Sbjct: 118 E-------------IIGSFALTEPGAGSDPVSQKTKAVRDGDSYIINGNKMFITTGKNSH 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ A  +       +   + +   NG    + + K+G R++ TVEL F +        
Sbjct: 165 VTVVTAYTDPDKRHRGISAFVVEKGTNGFSVGKEEKKMGLRASDTVELIFEDCRVPA--- 221

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            N+     +   I +  LD   + +        +  L  A+ YA  R   G  +     +
Sbjct: 222 ENLLGQEGDGFVIAMTSLDGGRIGISSQSLGVAQACLDAAVSYANERVQFGRPISQFQGL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+A  I AA  L+F  A   D  ++ +  A+ A       K +  +MA     +A
Sbjct: 282 RWMIADMATQIEAARLLTFNAAAMRDRGENYTAAASMA-------KVFASEMANRTAYQA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG GYI+E  + R+YR++   ++  G+       +  
Sbjct: 335 LQIHGGYGYIQEYPVERYYRDARVFTLYEGTSEIQRTVIAK 375


>gi|13474683|ref|NP_106252.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025438|dbj|BAB52038.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 408

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 154/415 (37%), Gaps = 45/415 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRR 109
           P+    E+ +L +      ++E+A                  R+D+ E +        R+
Sbjct: 32  PAWAADEVGMLYDMATRFMSEEIAP-----------------RYDEFEKNEMVDRESWRK 74

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL C+     +       AH+           ++   +   +   A  +    +  
Sbjct: 75  AGAAGLLCASMPEEYGGSGGTFAHESAIIEAIGHVGVDGFGIGLHNSIVAPYILHYGSEE 134

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K W PK+ + E             +   + +TE   G+D+  + ++ +K  +  Y ++
Sbjct: 135 QKKKWLPKLATGE-------------LIGAIAMTEPGAGSDLQGVKTRAEKDGN-QYRIN 180

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATV 287
           G K F+++   ++  I++ + +   G      ++ +     G    R  +KIG ++N T 
Sbjct: 181 GSKTFITNGQLANFIIVVTKTDPEKGAKGTSLIVVETDEVEGFERGRNLDKIGLKANDTS 240

Query: 288 ELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           EL F++        L      G ++ M+ L    L     +++ +  +LA  I Y + R 
Sbjct: 241 ELFFNDVRVPTSNLLGHEEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIEYVKERK 300

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +ID    +  +A++  +                             + A + KYW
Sbjct: 301 AFGKAIIDFQNTQFKLAELKTEATIGRVFYNDCVTRHING-------GLDPVTASMAKYW 353

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +   V+ E ++  GG GY+ E  IAR +R++    I  G+   M L +   L
Sbjct: 354 LSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKLLIGRSL 408


>gi|184157715|ref|YP_001846054.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183209309|gb|ACC56707.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
          Length = 384

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPISNFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     L +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQLIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|23014530|ref|ZP_00054341.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 378

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 135/394 (34%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q L R       Q     P   RWD+    P     +      G    +    ++   
Sbjct: 5   EEQALIRDTARAFAQ-EKLAPFAARWDREHLFPT--EAIAEMGELGFLGMVVPPEWDGAG 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +   M  L   T    +++             
Sbjct: 62  TDYVSYAMAVMEIAAGCGPLSTIMSVHNSVGCMPILSYGTEAQKEEFL------------ 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             PM +        LTE   G+D A+I ++ ++  D        ++  ++      I+ A
Sbjct: 110 -RPMARGEKLGCFCLTEPEAGSDAASIRTRARRDGDHYVISGAKQFISTAKNGQVAIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
             +   G   +   +      G    R+++K+G   + T +L F +        LG+   
Sbjct: 169 VTDPNAGKRGISAFVVPTDTPGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASYRLGEEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L  A  SV   R +L  A+ YA+ R   G  + +   +   +AD+A 
Sbjct: 229 GLKIALANLEGGRLGIAAQSVGMARSALDHALAYAKERKQFGKPIFEHQAVAFRLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A  +   +A+  D  +   +EA+ A       K +  +MA  V ++A++  GG GY
Sbjct: 289 RLEVAEQMVLHVASLRDAGRPCLKEASMA-------KLFASEMAERVCSDAIQIHGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   L +   L
Sbjct: 342 LADFPVERIYRDVRVCQIYEGTSDIQRLVISRAL 375


>gi|308474967|ref|XP_003099703.1| hypothetical protein CRE_23552 [Caenorhabditis remanei]
 gi|308266358|gb|EFP10311.1| hypothetical protein CRE_23552 [Caenorhabditis remanei]
          Length = 437

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 144/396 (36%), Gaps = 44/396 (11%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P +      GE  D+V         L+    +GL        +     K    +     
Sbjct: 62  QPLVREMDRKGEMDDRV---------LKGCFDNGLMGIEVPEKYGGSGSKFFDAVLVIEE 112

Query: 141 Y--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              + A + A   +  ++    ++ L  T    + + P+                T    
Sbjct: 113 ISKVDASVAALVDVHNTLFVPLIIEL-GTEEQKQKYLPRSV--------------TEAVG 157

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              L+E   G+D  A+ +  +K  D         W  +S  S+AF++ A  +   G   +
Sbjct: 158 SFALSEVSSGSDAFALKTTAKKDGDDYIINGSKMWITNSEHSEAFLLFANADPSQGYKGI 217

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + D    G    + ++K+G R+++T  + F N          +     +  K  I  
Sbjct: 218 TAFMVDKDSKGFSIGKPEDKLGIRASSTCPIHFDNVRVPKSA---ILGEYGKGYKYAIEC 274

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++  + +    + LA+        Y ++R   G  LID   M+  IA I  +I AA  L
Sbjct: 275 LNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGERLIDFQGMQHQIAQIRTEIEAARLL 334

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWC---------CKMAPAVIAEAMECIGGSG 423
            +  A   +       EAA A++ A                 ++A    ++ +E +GG G
Sbjct: 335 VYNAARMKENGLPFVREAAMAKLFASQVTTETESLRSQSTYFQVATNTTSKCVEWLGGVG 394

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           + +E  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 395 FTKEFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 430


>gi|53718291|ref|YP_107277.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia pseudomallei K96243]
 gi|76810606|ref|YP_332270.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|126440782|ref|YP_001057732.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126452094|ref|YP_001064977.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|134279500|ref|ZP_01766212.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167718152|ref|ZP_02401388.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167737181|ref|ZP_02409955.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
 gi|167814314|ref|ZP_02445994.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167822790|ref|ZP_02454261.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
 gi|167844365|ref|ZP_02469873.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167892877|ref|ZP_02480279.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167901363|ref|ZP_02488568.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909593|ref|ZP_02496684.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167917608|ref|ZP_02504699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|217419388|ref|ZP_03450894.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|226196647|ref|ZP_03792227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810882|ref|YP_002895333.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|242316558|ref|ZP_04815574.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254187697|ref|ZP_04894209.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196771|ref|ZP_04903195.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254260436|ref|ZP_04951490.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|52208705|emb|CAH34641.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia pseudomallei K96243]
 gi|76580059|gb|ABA49534.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
 gi|126220275|gb|ABN83781.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|126225736|gb|ABN89276.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|134248700|gb|EBA48782.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|157935377|gb|EDO91047.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653514|gb|EDS86207.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|217396692|gb|EEC36708.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|225931178|gb|EEH27185.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505147|gb|ACQ97465.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|242139797|gb|EES26199.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254219125|gb|EET08509.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 595

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 183/493 (37%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIDAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 478 AEGVKPEMSEFIT 490


>gi|320333832|ref|YP_004170543.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319755121|gb|ADV66878.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 599

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 113/563 (20%), Positives = 200/563 (35%), Gaps = 74/563 (13%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG-------ERWDK 96
             ++   P     E       +L     E AR       +L      G            
Sbjct: 22  QDVLGAMPYYAENETHD--ASLLDQILDEAARFTEN---ELQPLNQSGDQEGCTRHEDGS 76

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    ++    G      D  +        H +  A + +M        M P +
Sbjct: 77  VTTPKGFKEAYKKYREAGWTALSADPQYGGQGLP--HLVGNALVEMMNSANVAWSMYPGL 134

Query: 157 TSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  AL  + +  +   + PK+ + E+  T             + LTE   GTD+  I
Sbjct: 135 SHGAYSALAAVGSDDLKATYLPKLVNGEWTGT-------------MCLTEPHAGTDLGII 181

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
            ++ +   DG Y ++G K F+S+   D       ++LA++EG       +  FLVP+ L 
Sbjct: 182 RTRARDNGDGTYAITGTKIFISAGEHDMADNILHLVLARLEGSPEGTKGISLFLVPKYLV 241

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           +     G  N +    +++K+G   NAT  L F +  G+L+G+LN     +  M     L
Sbjct: 242 NADGTLGERNTVVCGSIEHKMGIHGNATAVLNFDDAKGYLVGELNKGMNHMFIMMNAARL 301

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIA 367
            + +  +    V+   A+ YA+ R                 +I  P ++R +        
Sbjct: 302 GTGLQGLGIGEVAYQNAVAYAKDRLQMRAPQRVRPDEAADPIIVHPDVRRMLLTAKAYTE 361

Query: 368 AATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  AL+  LA S D      +   R E      ++ PI K +           A +  GG
Sbjct: 362 AGRALAMWLALSLDVEHHHPDDAKRKEAGDLVALLTPIAKAFMTDNGFQSAVLAQQVFGG 421

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GYI+E  + +  R++    I  G+     LD++   +L  G    ++L   LE  L  +
Sbjct: 422 HGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLIGRKVLMDGGRKLQKLAGMLETFLEEN 481

Query: 480 -GKKVITILRDSISLCKEDKGLARFLTEKIAL-------ASSAAALYRAGMNDIADVFLE 531
            G + +    D++S   +  G    +  + A+       A +   L   G   +   +L 
Sbjct: 482 EGNEDLAPYLDTLSRAAQQVGTLTMVVGQKAMQNPDEANAVAVDYLRYVGH--VTYAYLW 539

Query: 532 NRFLDNCHSTHCMLHGRFNAAHI 554
            R               F AA +
Sbjct: 540 ARMAKIALDKQGDDKTGFYAAKL 562


>gi|322807513|emb|CBZ05088.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 379

 Score =  290 bits (742), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 143/375 (38%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSVAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
            +G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKAAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTMDAA-------EAKLYAAEAAMYVTNKSLQILGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + + L
Sbjct: 363 EGTSEVQKMVIASSL 377


>gi|312131322|ref|YP_003998662.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311907868|gb|ADQ18309.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 384

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 125/361 (34%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMV 162
              +++    G    + D  +          + A             +MS  +      +
Sbjct: 43  KEEVKKLGELGFLGMMVDPQYGGSGLDTLSYVIAMEEIAKVDASVAVVMSVNNSLVCYGL 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +P   + +   + S E             +     L+E   G+D  +  +  +   
Sbjct: 103 DKYGSPEQKEKYLKPLASGE-------------IIGAFCLSEPEAGSDATSQRTSAEDKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  +   +  ++++AQ    +    +  L+ +    G    + ++K+G R
Sbjct: 150 DFYLVNGIKNWITNGNSASVYLVIAQTHAELRHKGINALIVEKGQEGFLVGKKEDKLGIR 209

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  L F++        +     G    M       +  A  ++     +   A+ Y+
Sbjct: 210 ASDTHSLNFNDVKVPKDRRIGEDGFGFKFAMSTLNGGRIGIAAQALGIAAGAYELALKYS 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + +   ++  +A++   I AA  + ++ A   D+  S  E AA A+     
Sbjct: 270 KERKAFGKPISEHQAIQFKLAEMHAKIQAARWMVYKAAWDKDQGNSYIESAAMAKW---- 325

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  ++A     EA++  GG GY+ E  + R  R++    I  G+     L +   + 
Sbjct: 326 ---YASEVAMWATTEAVQIHGGYGYVREYHVERMMRDAKITQIYEGTSEIQKLVIAREIL 382

Query: 460 K 460
           K
Sbjct: 383 K 383


>gi|239831285|ref|ZP_04679614.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823552|gb|EEQ95120.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 592

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/547 (16%), Positives = 189/547 (34%), Gaps = 58/547 (10%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLH-AYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A      L       G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAAERVEPLRITGDKHGATVKDGVVTTAPGWKELYRDWIEGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPMTMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASKELKDVYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNADGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P + R +  +      A ++++  A++ D
Sbjct: 317 YQQALSYAKERKQGRAIGADPKQGMTPIIEHPDVSRMLLTMKALTQIARSITYSCAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +   +   +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHATDGADQQFWSDRAGLLTPLAKSFATDAGVDVASLGVQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L V  L        +     L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVVRKLPLGQGEHIKGFLDELQADADKASASNRPELGETGARL 496

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
            +    AR  TE +  A +   L  A         L +      +     L G  +   +
Sbjct: 497 SKAIAQAREATEWLQKAVADGQLEAALAGATPYQRLLSLVSGGAYLARAALAGDDSGRAV 556

Query: 555 IDSLYLD 561
           +   + +
Sbjct: 557 LSRFFAE 563


>gi|84499506|ref|ZP_00997794.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84392650|gb|EAQ04861.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 592

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 100/535 (18%), Positives = 191/535 (35%), Gaps = 70/535 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           + L     +   +E  ++A+     L+A     G   +   V     +     R    G 
Sbjct: 30  DDLDRDFTAAILEEAGKLASEVFAPLNAVGDSQGVTLENGVVRTPEGFKEAFERFREGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +               ++  + +        +  + S +    T    + + 
Sbjct: 90  AGLDCDPDYGGQGLPYLLSTATGEIFSSSNMAFMMYPGLTHGAYSAIHAHGTDAQKQTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K F+
Sbjct: 150 PKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTRAEPQDDGSYAITGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       V  F+VP+ L       G  N +   +++ K+
Sbjct: 197 SAGDHDMSENVIHLVLAKIPGGPEGIKGVSLFIVPKFLVKDDNTPGDRNAVSVGKVEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    G+LLG+ +     +  M     L  A+  +S   V+   A+ YA
Sbjct: 257 GIHGNATCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVAMQGLSQATVAYENALAYA 316

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  LI  P ++R++ D    +  A A     A+  D +    
Sbjct: 317 KDRLQGRAVTGAENPDGPADPLIVHPDIRRSLMDQKSFVEGARAFGLWSASLIDRSHRMG 376

Query: 388 EEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++ A     +M P+ K +       +   A +  GG GYIEE  +++  R++    I  G
Sbjct: 377 DDQAEGLVSLMTPVLKGFLTDQGFDMTVLAQQIYGGHGYIEEWGMSQFTRDARIAMIYEG 436

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD++                L    G         ++  I    +D+ L     
Sbjct: 437 ANGIQALDLVG-------------RKLAAQGGKPAMAFFEEIKGFIKENSDDEDLKANFM 483

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +   L +++  L  A M      F++N       + +  L G ++  H+   + L
Sbjct: 484 DP--LKTASKQLQEAAM-----FFMQN----GMKNPNEALSGSYDFMHLFGHVCL 527


>gi|169796349|ref|YP_001714142.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156915|ref|YP_002318960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483810|ref|YP_002326035.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|239503638|ref|ZP_04662948.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|260553748|ref|ZP_05826019.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|332851995|ref|ZP_08433862.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332871726|ref|ZP_08440186.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|169149276|emb|CAM87159.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056075|gb|ACJ40977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988607|gb|ACJ58906.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|260405148|gb|EEW98647.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|322508023|gb|ADX03477.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517609|gb|ADX91990.1| acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729572|gb|EGJ60910.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332731294|gb|EGJ62591.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 384

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     L +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQLIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|295099579|emb|CBK88668.1| butyryl-CoA dehydrogenase [Eubacterium cylindroides T2-87]
          Length = 379

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 138/379 (36%), Gaps = 34/379 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+ E  P     +       +    + R +          I A           G
Sbjct: 27  NAADVDENERFP--KENVEVMRQAKMLGIPYSREYGGAGADYLCYIMAVEELSKTCATTG 84

Query: 150 HLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++S   +     +A   T    K + P + +                    GLTE   G
Sbjct: 85  VVLSAHTSLGTWPIAQFGTEEQKKRFLPDLCTG-------------KRLAAFGLTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD A   +      D  Y L+G K F+++   ++ +I+ A  +   G   +   + +   
Sbjct: 132 TDAAGQQTTAVLDGDH-YVLNGTKIFITNAGEAEVYIIFAMTDKSKGTRGISAFIVEKGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G  +   + K+G R +AT EL F+N     +   N+     +  KI +  LD   + ++
Sbjct: 191 PGFTFGLHEKKLGIRGSATSELIFNNVR---IPKENLLGKEGQGFKIAMQTLDGGRIGIA 247

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+      I Y + R   G  +      +  +AD+   + AA  L +  A + +
Sbjct: 248 AQALGIAQGAIDEVIPYVKARKQFGRPIAKFQNTQFQLADMQTKVDAARWLVYSAAMAKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +  +        +A   K +  ++A  V  +A++ +GG GY  +  + R +R++    
Sbjct: 308 EGRPYT-------TLAAEAKLFAAEVAMEVTTKAIQLMGGYGYTRDLPVERMFRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   + +
Sbjct: 361 IYEGTSEVQRMVISGAMLR 379


>gi|300870342|ref|YP_003785213.1| short-chain specific acyl-CoA dehydrogenase [Brachyspira pilosicoli
           95/1000]
 gi|300688041|gb|ADK30712.1| acyl-CoA dehydrogenase, short-chain specific [Brachyspira
           pilosicoli 95/1000]
          Length = 641

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 139/353 (39%), Gaps = 33/353 (9%)

Query: 115 LHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           +    + + +        ++ I    L  +       L + +   +  +A   T    K 
Sbjct: 51  IMGIPYGKEYGGAGLDVISYAIAVEELSRVDGGVGVILSAHTSLGSYPIAAFGTEEQKKK 110

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +               P+ K       GLTE   G+D     +      D  Y L+G K 
Sbjct: 111 YL-------------TPLAKGEKIGAFGLTEPEAGSDAGGTETTAVLNGDH-YILNGEKI 156

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++ P +D +++ A     +G   +   + +    G  +    NK+G RS++T +L FS
Sbjct: 157 FITNAPKADTYVVFAVTTPGIGTKGISAFIVEKGWEGFEFGEHYNKLGIRSSSTAQLLFS 216

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           +         N+     +  KI +  LD   + ++   + +A+     A+ YA+ R   G
Sbjct: 217 DVKVP---KENLLGKEGQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAALEYAKDRIQFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   ++D+A  + AA  L +  A   ++ +    EAA A+        +   
Sbjct: 274 RPIAQQQAIAFKLSDMATKLRAARLLVYSAAYLKEKHEPYGMEAAMAKQ-------YASD 326

Query: 407 MAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +   V+ +A++  GG+GYI+    + R YR++   +I  G+     + +   +
Sbjct: 327 IGLEVVNDALQIHGGNGYIKGAYMVERAYRDAKICTIYEGTNEIQRVVISAAI 379


>gi|170755246|ref|YP_001782838.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra]
 gi|169120458|gb|ACA44294.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra]
          Length = 379

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 143/375 (38%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMAKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSVAVLEGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
            +G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKAAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTMDAA-------EAKLYAAEAAMYVTNKSLQILGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + + L
Sbjct: 363 EGTSEVQKMVIASSL 377


>gi|322806444|emb|CBZ04013.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
          Length = 377

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 31/319 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   A  +    T +  + +               P+ K       GLTE   G
Sbjct: 83  TFITAGASLVALPLLNFGTDKQKEKYLK-------------PLAKGEYIGSFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  A  +      D  Y L+G K F+++ P+ D  I+ A  E   G   +   + +   
Sbjct: 130 SDAGAGQTTAVLEGD-YYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKW 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +G      +NK+G R   T +L F N         N+     +  KI L  LD   + V+
Sbjct: 189 DGFSTGAHENKMGIRGTETADLIFENVKVP---KENLIGKEGKGFKIALNTLDVGRIGVA 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A     EAI Y + R   G  L      +  IAD+   + AA  L +  A   D
Sbjct: 246 AQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAEKKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E+A A       KY+  ++A  V  +A++  GG G++++  I R YR++   S
Sbjct: 306 NGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITS 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +     K
Sbjct: 359 IYEGTSQVQQMVIAAKALK 377


>gi|254506623|ref|ZP_05118764.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16]
 gi|219550496|gb|EED27480.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16]
          Length = 384

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 154/408 (37%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     Q     P   +WD  +  P    +L  +   G        
Sbjct: 2   DFELNEEQRAFADTAAQFAEQ--RLMPNAAKWDSEQIFP--KEVLSEAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+     + MVA   T  V + +  K+ + E
Sbjct: 58  DQGGLGLSRLDASIVFEQLAMGCTSTTAYMTIHNMVSWMVASFATDAVKQRYCDKLVTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
           +                  LTE   G+D A++T+   K  D  Y L+G K F+S    +D
Sbjct: 118 W-------------LGSYCLTEPNAGSDAASLTTSAIKQGD-RYILNGAKAFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+     G   V   +   S  G+ Y R + K+G  S  T  + F          
Sbjct: 164 VLVVMARTSDD-GAKGVSAFVVPASAEGISYGRKEPKMGWNSQPTRSVTFDGVVIPDDHR 222

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++ A  S+   + +L +A  Y + R   G  + D   ++  
Sbjct: 223 LGAEGEGFTFAMKGLDGGRINIATCSIGTAQQALNQATQYIQERKQFGKRIADFQSIQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  L    A   D+       ++ A     + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQLVRLAACKLDQ------NSSDATAYCAMAKRYATDIGFKVCDQALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465
            GG GYI+E  + R++R+   + IL G+   M L +   LL +G  L 
Sbjct: 337 FGGYGYIQEYPMERYFRDVRVHQILEGTNEIMRLIISRRLLAQGAQLL 384


>gi|108756791|ref|YP_631977.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460671|gb|ABF85856.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 381

 Score =  289 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 143/394 (36%), Gaps = 32/394 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q L R       +     P     D+ E  P    L R+    GL        +    
Sbjct: 7   ETQTLIRDTARKFAR-ERVAPLARTLDREERFPT--DLFRQLGEMGLLGVNLPARYGGSE 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                   A      A       M+ +     ++    T    + +  ++ S E      
Sbjct: 64  AGVVAYALAMMEMAAADASTSVAMAVTNMCGELINAFGTDAQREKYVTRLASGE------ 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                 ++A    L+E   G+D  A+ +   +  D        +W  S   +   ++ A+
Sbjct: 118 ------AIAGSFALSEPHAGSDPGALRTTAVRRGDVWVLNGSKQWITSGAYAGVMVVWAR 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                G   +   + +G   GL   + ++K+G RS+ TV L F +         N+    
Sbjct: 172 TSP-AGNKGLSCFIVEGGTKGLIIGKHEDKMGLRSSNTVSLTFEDCEVPA---ENLLGAE 227

Query: 309 VEDMK-ILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K  ++ LD   + ++       R +L   + Y + R   G  + +    +  +AD+
Sbjct: 228 GQGFKLAMVALDGGRIGIAAQACGVGRAALEATVAYVKDRQAFGQPIGEFQGPRFMLADM 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA  L+ R A+  ++ +  S EA+ A       K +  +M+  V  +A++  GG 
Sbjct: 288 QTQLEAAELLTLRAASMKEKGQPFSREASMA-------KLFASEMSNKVADKAVQLHGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GYI+E  + R +R++   +I  G+     + +  
Sbjct: 341 GYIDEFPVERFFRDARVQTIYEGTSEVQRMVIAR 374


>gi|302381945|ref|YP_003817768.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192573|gb|ADL00145.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 387

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 136/361 (37%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL        +  +     H++   R       +   +   +   A  + 
Sbjct: 48  RELWNKAGEAGLMGLSQPEEWGGMGGDYRHEVVLMRQLGWKGADHFGVSLHNAIVAPYIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P++ + E             +   + +TE   G+D+  + +   K  +
Sbjct: 108 HYGTEEQKARWLPRLVTGE-------------LVGAIAMTEPGAGSDLQGVKTTAVKSGN 154

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGN 281
           G Y ++G K F+++   ++  I++A+ +   G      ++ +     G    R  +KIG 
Sbjct: 155 G-YVINGSKTFITNGQLANFIIVVAKTDPAAGAKGTSLIVVETDGAEGFERGRNLHKIGM 213

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
             N T EL F++        +      G ++ M+ L    L+ A+  ++     L E + 
Sbjct: 214 EGNDTSELFFNDVHVPADNIIGGEEGRGFIQLMQQLPQERLNIAVQGIAAAERGLQETLA 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +++    +  +A++   +  A            + +          + A
Sbjct: 274 YVKQRKAFGKSVLEFQNTQFKLAEVKTKLTVARVFVDHCIGLHLKGQ-------LDAVTA 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW   +   VI E ++  GG GY+ E  IA+ Y+++    I  G+   M + +   
Sbjct: 327 SMAKYWVTDLQGEVIDEMLQLHGGYGYMNEYPIAQLYKDARVQRIYGGTNEIMKVLIARS 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|289423447|ref|ZP_06425251.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
 gi|289156205|gb|EFD04866.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus
           anaerobius 653-L]
          Length = 380

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 134/377 (35%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P       +    G       + +         ++ A   +    + +
Sbjct: 26  PVAADVDLSHTFPV--DNFSKMAELGFTGIGIPKEYGGTGGGSIEEVIAVSEFAKKCMSS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S  + +   +    T    + + P++              K        LTE   G
Sbjct: 84  SAILSIHLIAPHAIHKFGTEEQKQTFLPRLT-------------KGGSLGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  A  ++     +   Y ++G K F+S    +D  ++ A  +   G   +  ++ +  
Sbjct: 131 SDAGAAKTKAILDPETNEYVINGTKCFISGGSRADVVLLFALTQPEKGLRGMSAIIVEKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G   + T EL F +        L     G    M+ L    + +   
Sbjct: 191 TPGFSIGKIESKMGLNGSETAELIFEDCRVPAANLLGKEGQGFKIAMQALDGARIGTGAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+     ++  ++ Y + R   G  +     ++  IAD+A    AA  L +  A   D  
Sbjct: 251 SIGVAEGAIDLSVKYTKERVQFGKPVGALQGIQWYIADMATKTEAAKTLVYYAAYLKDAG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+ ++EAA         K    + A  V   A++  GG GY+++  + R YR++    I 
Sbjct: 311 KNHTKEAAM-------CKLNAAENARYVTNLALQIHGGYGYMKDYPLERMYRDAKITEIY 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 364 EGTSEIHKVVIAREVMK 380


>gi|163743962|ref|ZP_02151332.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161382807|gb|EDQ07206.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 593

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 104/540 (19%), Positives = 199/540 (36%), Gaps = 79/540 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGL 115
           + L     +   +E  ++++     L+      G R +  V + P  + A   +    G 
Sbjct: 30  DELDADFTNAVLEEAGKISSEVLHPLNTVGDTEGCRLENGVVYTPTGFKAAFEQVKEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +               ++  A          +  +AS +    +      + 
Sbjct: 90  TGLDMPEQYGGQNMPYIMGTAVGEMFSAANQAFTMYQGLTHGAASAILAHGSDAQKDTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K F+
Sbjct: 150 PKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           SS   D       ++LA++ G       V  F+VP+ +       G  NG+   +++ K+
Sbjct: 197 SSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKEDGSLGDRNGVSVGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + + +  G+LLG  +     +  M     L   +  ++    +   A+ YA
Sbjct: 257 GIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALEYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               LI  P ++R + D       A A     A   D+A   
Sbjct: 317 KDRLQ-GRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGAKMIDQAHRA 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  
Sbjct: 376 EDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEEWGMSQYTRDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED----KGL 500
           G+     LD++                L QD G   K V+       + CKE+    +  
Sbjct: 436 GANGVQALDLVG-------------RKLAQDGG---KHVMAFFEMVKNFCKENGDISESY 479

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           ++   E   L +++  L  AGM      F++N       + +  L G ++  H+   + L
Sbjct: 480 SKEFIEP--LKAASKDLQAAGM-----YFMQN----GMTNPNNALSGSYDFMHMFGHVCL 528


>gi|260770186|ref|ZP_05879119.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
 gi|260615524|gb|EEX40710.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
          Length = 384

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 88/385 (22%), Positives = 141/385 (36%), Gaps = 27/385 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    +LR +   G            +   +           M 
Sbjct: 22  ERLAPMAATWDEEHIFP--KDVLREAGELGFLSLYTPEDEGGLGLSRLDASLIFEQLAMG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M+       MVA   T      + PK+ + E+                  LTE
Sbjct: 80  CTSTTAFMTIHNMVTWMVASFATAEAKAQFCPKLVTGEW-------------LGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D A++T+   K+SDG Y LSG K F+S    +D  +++A+  G  G   +   + 
Sbjct: 127 PNAGSDAASLTTSATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
               +G+ Y R + K+G  S  T  + F          L     G    MK L    ++ 
Sbjct: 185 PAQADGITYGRKEPKMGWNSQPTRSVTFDKVHVPASALLGEEGQGFTFAMKGLDGGRINI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV   + +L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  
Sbjct: 245 ATCSVGTAQQALNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    +      A     + K +   +   V   A++  GG GYI+E  + RH+R+   +
Sbjct: 305 DRGDPQ------ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVH 358

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF 465
            IL G+   M L V   L       
Sbjct: 359 QILEGTNEIMRLIVARRLLSDGGAL 383


>gi|254296191|ref|ZP_04963648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157806275|gb|EDO83445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
          Length = 599

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 183/493 (37%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 35  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 88

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 89  QQYIDAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 147

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 148 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTY 194

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 195 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 254

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V
Sbjct: 255 KCGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 314

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 315 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 374

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 375 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 435 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 481

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 482 AEGVKPEMSEFIT 494


>gi|299143608|ref|ZP_07036688.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518093|gb|EFI41832.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 380

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 76/375 (20%), Positives = 135/375 (36%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D  E  P     +++    G     + + +        A+ +    L       
Sbjct: 26  PVAQETDATENVPM--ENVKKLARYGFFGIPFPKEYGGQGADYLAYAMAVEELSKKCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    T    K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTEEQKKKYLPDLLSG-------------RKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   +D FI++A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTTAVLDGDE-YILNGTKIFITNAGFADTFIIIAMTDKSKGTRGISAFIVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G      ++K+G R ++T EL F N        L     G    MK L    +  A  
Sbjct: 190 TPGFRVGEPEDKMGIRGSSTCELIFENCRIPKENLLGREGKGFGIAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     ++ E + Y + R   G  L      +  +AD+     AA  L +R A+     
Sbjct: 250 ALGIAEGAIDETVVYVKERKQFGKRLSQFQNTQFQLADMKAKTDAAQLLVYRAADMKYNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ S  AA A++ A        + A  V    ++  GG GY  +  I R  R++    I 
Sbjct: 310 EAYSHAAAMAKLFAA-------ETASDVTRRCLQLFGGYGYTRDYPIERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M + + N +
Sbjct: 363 EGTSEVMRMVISNWM 377


>gi|168186941|ref|ZP_02621576.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
 gi|169295176|gb|EDS77309.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           C str. Eklund]
          Length = 379

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 128/377 (33%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P    + ++    G+    + + +        ++ +    +       
Sbjct: 26  PIAAETDATGEFPM--EVYKKLGKYGIIGLPYPKEYGGTGGDYLSYILAVEEISKACGTL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GISYSVNTSLCCGAIYQNGTEEQKKKYLPDLCSG-------------KKIGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++ P+++ F++ A  +   G   +   + +  
Sbjct: 131 GTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDRSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G R     E+   +        L     G    MK L    +  A  
Sbjct: 190 FPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +   A  Y + R   G  L     +   +AD+ + I  +  L ++ A   +  
Sbjct: 250 GLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSRYLLYQAAMDKNNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S  AA A       K  C   A  V  EA++  GG GYI++  + R  R++    I 
Sbjct: 310 NPYSVSAARA-------KLSCTDTAMYVTTEAVQLFGGYGYIKDYPVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|168183515|ref|ZP_02618179.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf]
 gi|237796654|ref|YP_002864206.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657]
 gi|182673364|gb|EDT85325.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf]
 gi|229263048|gb|ACQ54081.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657]
          Length = 379

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 142/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK E +P     + +    G+    + + +        ++ I    L       
Sbjct: 26  PIAADIDKTERYPI--ETVEKMSKYGIMGMPFPKEYGGAGTDYLSYVIAVEELAKECATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +    + +    T    K + P + S                    GLTE   
Sbjct: 84  SVILSAHTSLCCAPIFEFGTEEQKKKYLPDLLSG-------------KKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +A  S      D  Y L+G K F+++  + D F++ A  +   G   +   + +  
Sbjct: 131 GTDASAQQSIAVLKGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G R+++T EL F +        L     G    MK L    +  A  
Sbjct: 190 MPGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIAMKTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L  AI Y + R   G  L     ++  IAD+ + + AA  L ++ A      
Sbjct: 250 ALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAAKYLVYKSAWKKSAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +AA         K +  + A  V  ++++ +GG GY ++  + R  R++    I 
Sbjct: 310 ENYTVDAA-------EAKLYAAETAMYVTNKSLQVLGGYGYTKDYPLERMLRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + + N L
Sbjct: 363 EGTSEVQKMVIANNL 377


>gi|89095579|ref|ZP_01168473.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89089325|gb|EAR68432.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 376

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 134/362 (37%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L++    GL        +        ++ I    L  ++      L   +    + +
Sbjct: 38  RDILKKMGGLGLMGIPVPEKYGGAEMDFTSYIIAINELSKVSATVGVILSVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ + EY                  LTE   G+D  ++ ++  +  
Sbjct: 98  LYFGTEEQKQKYVPKLAAGEY-------------LGAFCLTEAGAGSDAGSLKTKAVRNG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D +I+ A     +G   V   +     +GL   + + K+G  
Sbjct: 145 DEYILNGSKVFITNGGEADVYIVFASTSPELGTKGVSAFIVGKGTSGLVIGKDEEKMGLH 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAI 336
            + TV+L F +         N+     E  KI +  LD+  + ++   + +       A+
Sbjct: 205 GSRTVQLNFEDMRVPA---ENLLGAEGEGFKIAMANLDAGRIGIAAQALGIAEAALEAAV 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y++ R   G  +  Q  +   +AD+A ++ A+  L ++ A      +    +A+ A   
Sbjct: 262 AYSKERSQFGKPISHQQGIGFKLADMATNVEASRLLVYQAAMMRQNGERCGMQASMA--- 318

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  K A     EA++  GG GY E+  + R++R+S    I  G+     + +  
Sbjct: 319 ----KLFASKTAVETSIEAVQVFGGYGYTEDYPVERYFRDSKITEIYEGTSEIQRIVISK 374

Query: 457 LL 458
            L
Sbjct: 375 NL 376


>gi|94499983|ref|ZP_01306518.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65]
 gi|94427841|gb|EAT12816.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65]
          Length = 589

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 93/479 (19%), Positives = 174/479 (36%), Gaps = 54/479 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYG 88
               MN    D L    ++  P           E ++    +E ++ A N   P      
Sbjct: 7   PLNDMNFVLFDVLKADGLSQLPGFEDAT-----EEMIRAVLEEASKFAENVFQPTNQDGD 61

Query: 89  PGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             G ++D     V     +    +     G         +         KI    +    
Sbjct: 62  IEGCQYDPETHNVTTPKGFKEAYKTFAEGGWSGLSATTEYGGQGLPHLLKIVVDEMACST 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L  G     S  +   +       +   + P++ S E+  T             + LTE
Sbjct: 122 NLSLGMYPGLSHGAIDALTEHAEQELKDKYLPQLISGEWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
            + GTD+  I ++ +  +DG Y +SG K +++    D       ++LA++ G       +
Sbjct: 169 PQCGTDLGLIRTKAEPQADGSYNISGTKIWITGGEHDMVDNIVHLVLAKLPGAPDSSKGI 228

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             FLVP+ LEDGS N      L++K+G + +AT  + F    G+L+G  N     +  M 
Sbjct: 229 SLFLVPKFLEDGSRNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLIGKENEGLKCMFTMM 288

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIAD 361
               +   +  +     +   ++ +A+ R  S               +I  P ++R +  
Sbjct: 289 NAARIMVGVQGLGLAEKAYQISLGFAKERLQSRSLTGPKSPDEKADPIIVHPDVRRMLMQ 348

Query: 362 IALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
             + +  A  +++       LA+  D+   R E     +IM PI K +          +A
Sbjct: 349 QKVFLEGARCMAYFTGYHLDLAHKHDDESVREESDDIVQIMTPIIKAYLTDEGFFSTDQA 408

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
           ++ +GGSG+ ++  + +  R+     I  G+     LD+    L  KG  L +  F  +
Sbjct: 409 LQSMGGSGFTQDWEVEQLLRDGRIARIYEGTNGIQALDLTGRKLTIKGGRLPKTFFKVM 467


>gi|323497125|ref|ZP_08102145.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM
           21326]
 gi|323317700|gb|EGA70691.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM
           21326]
          Length = 384

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 83/382 (21%), Positives = 146/382 (38%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ +  P   ++L+++   G            +   +           M     
Sbjct: 26  PMAAQWDEEQLFP--KSVLQQAGELGFMSLYTPEDQGGLALSRLDASIIFEQLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       MVA      V   + PK+ + E+                  LTE   G
Sbjct: 84  TAFMTIHNMVTWMVASFAQEAVKAHFCPKLITGEW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++T+   K  D  Y ++G K F+S    ++  +++A+     G   V   +     
Sbjct: 131 SDAASLTTSATKQGD-QYIINGSKVFISGAGDTEVLVVMARTSDD-GAKGVSAFVVPADA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G+ Y R + K+G  S  T  + F          L     G +  MK L    ++ A  S
Sbjct: 189 EGISYGRKEPKMGWNSQPTRSVTFEQVSIPAEYLLGEEGQGFIFAMKGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ Y + R   G  L     ++  +AD+A ++ AA  L    A   D+  
Sbjct: 249 VGTAQHALNAALQYVQERKQFGQALAHFQGLQFKLADMATELVAARQLVRLAAYKLDQGD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL 
Sbjct: 309 PE------ATTYCAMAKRFATDVGFNVCDQALQIFGGYGYIKEYPLERHFRDVRVHQILE 362

Query: 445 GSGNAMVLDVL-NLLEKGTNLF 465
           G+   M L +   +L +GT + 
Sbjct: 363 GTNEIMRLIIARRVLTEGTQIL 384


>gi|295689060|ref|YP_003592753.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295430963|gb|ADG10135.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 379

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 141/375 (37%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G      +         +              +  
Sbjct: 26  PHSADWDERKHFPV--DVLRQAAELGFAGIYVNEDVGGSGLSRLDASIIFEALSYGDVPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    ++ M+    +  + K + P++ S E             +     LTE   G
Sbjct: 84  AAYLTIHNMASWMIDRFGSEDLRKRYLPRLTSME-------------LIASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +  +   D      G  +     +SD ++++A+  G  G   V   + +    
Sbjct: 131 SDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDVYVVMARTGGE-GAKGVSAFVVEKGTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           GL +   + K+G  +  T ++ F N    +   +     G    M  L    L+ A  S+
Sbjct: 190 GLSFGANERKMGWNAQPTAQVNFDNCRVPVENRIGQEGEGFRFAMMGLDGGRLNIASCSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L  A  Y   R+  G  L D   ++  +AD+A ++ AA  +  R A++ D    
Sbjct: 250 GGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRAAHALDNKHP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A  +  + K +       V  +A++  GG GY+++  + R  R+   + IL G
Sbjct: 310 E------ATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERIVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   L +
Sbjct: 364 TNEIMRVIIARELFR 378


>gi|297617060|ref|YP_003702219.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144897|gb|ADI01654.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 379

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 145/384 (37%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P     D+   +PA   ++ +    G     W   +         + +    +   
Sbjct: 22  KYLDPIAAEIDENSRYPA--EVIAKLAEGGWMGMPWPAEYGGAGLDFLTYTMVIEEISRS 79

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +   +  ++  +    T    + +               P+ K        +T
Sbjct: 80  CAATGFTVSCHTSLASGPIYFFGTEEQKQKYLK-------------PLAKGEKIGAFAIT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL 262
           E   GTD+ A T+      D  Y ++G K F S+  ++D FI+ A  +   G   +   +
Sbjct: 127 EPGAGTDVGAATTTAVLDGDE-YVINGTKTFTSNGPVADTFIIFAWTDKSQGPKGMSAFI 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------ 316
                 GL   +   K+G R++ T E+   +         N+     E +KI +      
Sbjct: 186 VPKEAPGLKVGQHFLKMGIRASQTSEIILKDCRVP---KENLLGKEGEGLKIAMASFDNG 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  +V  M+ +L E+I Y+++R   G  +     ++  IAD+A D+AAA  L++  
Sbjct: 243 RIGIAAQAVGIMQAALDESISYSKQRVQFGKPIARHQAIQWMIADMATDLAAARFLTYYA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   ++    S+EAA A       K +  + A    ++A++  GG GY +   + R  R+
Sbjct: 303 AWLKEQGLPYSKEAAMA-------KVFAAEAATKHTSKAVQIHGGYGYCKGFKVERLMRD 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+  A  + +   L +
Sbjct: 356 AKITEIYEGTSEAQRMVIAGNLLR 379


>gi|323495209|ref|ZP_08100293.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
 gi|323310568|gb|EGA63748.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
          Length = 384

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 86/382 (22%), Positives = 148/382 (38%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +L  +   G            +   +           M     
Sbjct: 26  PMAAEWDEQQTFP--KQILAEAGELGFLSLYTPEQAGGLALSRLDASLIFEQLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       MV    T    + + PK+ S E+                  LTE   G
Sbjct: 84  TAFMTIHNMVTWMVGSFGTQAAIESYCPKLISGEW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+T+  +    G Y L+G K F+S    +D  +++A+  G  G   +   +     
Sbjct: 131 SDAAALTTSAKLTEQG-YVLNGAKVFISGAGDTDVLVVMART-GEAGAKGISAFIVPADS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y R + K+G  S  T  + F N    +   L     G    MK L    ++ A  S
Sbjct: 189 QGISYGRKEPKMGWNSQPTRSISFDNVVVPVENLLGEEGQGFTFAMKGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L +A  Y + R   G  L     ++  +AD+A ++ AA  +    A+  D+  
Sbjct: 249 VGTAQQALNQATQYLKERKQFGQPLAQFQALQFKLADMATELVAARQMVRLAASKLDQG- 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                ++ A     + K +   +  AV  +A++  GG GYI+E  + R++R+   + IL 
Sbjct: 308 -----SSDATAYCAMAKRYATDIGFAVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILE 362

Query: 445 GSGNAMVLDVL-NLLEKGTNLF 465
           G+   M + V   LL++G  L 
Sbjct: 363 GTNEIMRMIVARRLLQEGAQLL 384


>gi|290959882|ref|YP_003491064.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260649408|emb|CBG72523.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 385

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 131/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH       +          +        A + +
Sbjct: 33  PHAAAVDEEARFP--QEALDALVANDLHAVHVPEEYGGAGADALATVIVIEEVARACVSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +                + K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEELKKKYL-------------GALAKGDAMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +SD + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTRAVRDGDFYVLNGVKRWITNAGVSDYYTVMAVTDPDKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA AL+++ A   +    
Sbjct: 258 GVAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKIEAARALTYQAAAKSERGDK 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|330752055|emb|CBL80566.1| acyl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
 gi|330752176|emb|CBL87135.1| butyryl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
          Length = 381

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 138/373 (36%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER DK +F    H  +++    G    + + ++          + A          A  +
Sbjct: 30  ERDDKQQFP---HDQIKKLGALGFMGMMVNPAYGGSGMDTMSYVLAMEELSKIDASASVV 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           MS  +      +           +  K+ S E                   L+E   G+D
Sbjct: 87  MSVNNSLVCWGLDTFGNEAQKTKYLTKLASGEQ-------------IGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + ++    + D         W  +    +  +++AQ     G   +  L+ +   +G 
Sbjct: 134 ATSQSTTAIDMGDHYLLNGTKNWITNGGTCEIALVIAQTNREKGHRGINVLIVEKGMDGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
              + ++K+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 194 IVGKKEDKLGIRGSDTHTLLFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L  A+ Y++ R   G  + +   +   +AD+ + +  A  L ++ A   DE K+  
Sbjct: 254 AQGALDLALAYSKERTTFGKPIHEHQAIAFKLADMEMKVEQARMLVYKAAWLKDEGKNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E+A A++ A        + A  V  EA++  GG G+++E  + R  R++    I  G+ 
Sbjct: 314 KESAMAKLGA-------SEAAMWVATEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   + K
Sbjct: 367 EIQRIVISRDMIK 379


>gi|283798801|ref|ZP_06347954.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1]
 gi|291073488|gb|EFE10852.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1]
 gi|295092704|emb|CBK78811.1| Acyl-CoA dehydrogenases [Clostridium cf. saccharolyticum K10]
 gi|295114947|emb|CBL35794.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SM4/1]
          Length = 384

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 143/385 (37%), Gaps = 39/385 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     +++    G       + +         + +    L  +    
Sbjct: 26  PLAQEVDETEHFPT--ETVKKMQKLGFMGIPVPKEYGGQGCDPLCYAMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCCDPIQTYGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++   +D ++++A     E   G     +   
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKIFITNGKEADIYVIIAVTGTKEDARGRKKKEISAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + +    G  +   + K+G R +AT EL F++     +   N+     +   I ++ LD 
Sbjct: 190 IVEKGTPGFTFGTKEKKMGIRGSATYELIFTDCR---IPKENLLGQQGKGFNIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + LAE      I Y + R   G  L      +  +AD+A  + AA  L +R
Sbjct: 247 GRIGIAAQALGLAEGALERTIEYVKERKQFGRALGQFQNTQFQLADMATKVKAAQLLVYR 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K+ S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R
Sbjct: 307 AAMAKATQKTYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+     + +   L K
Sbjct: 360 DAKITEIYEGTSEVQRMVISGALLK 384


>gi|328873098|gb|EGG21465.1| isovaleryl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 848

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 139/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + DK    P+   + ++    GL        +  + +   +H I    L   +   
Sbjct: 492 PIAAQVDKDNVFPSH--MWKKMGELGLLGITAPAKYGGLELGYTSHCIAMEELSRASASV 549

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +         + + PK+ S ++                L ++E   
Sbjct: 550 ALSYGAHSNLCVNQITRNGNEAQKQKYLPKLISGDF-------------VGALAMSEPNA 596

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ +   ++  G        W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 597 GSDVVSMKTHATRVDGGWKINGNKMWITNGPDADVLVVYAKTDPAGGSKGITAFLIEKGM 656

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G    +  +K+G R + T EL F + F     D NV       +++L+       L  +
Sbjct: 657 KGFSTGQKLDKLGMRGSNTCELIFEDCFVP---DENVMGTVGSGVRVLMSGLDYERLVLS 713

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  + + + Y   R   G  + +  +M+  +AD+   + A+ +  + +A + D
Sbjct: 714 AGPLGIMQSCMDQVVPYIHTREQFGKKIGEFQLMQGKVADMYTLLNASRSYVYTVARAAD 773

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 ++             +  + A  +  +A++ +GG+GYI E    R  R++    
Sbjct: 774 AGLVSRKD-------CAAVILYSAENATQLALQAIQTLGGNGYINEFPTGRLLRDAKLYE 826

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 827 IGAGTSEIRRMLIGREL 843


>gi|91084343|ref|XP_972925.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum]
          Length = 401

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 144/383 (37%), Gaps = 32/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +P     +R+    GL        F            A          A
Sbjct: 44  PIAAKIDREHLYP--KEQIRKMGELGLMAVAVPEEFGGTGLDYVAYAIAMEEISRGCASA 101

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     +         + +              AP           L+E   
Sbjct: 102 GVIMSVNNSLYLGPIQYFGNKEQKEKFI-------------APFTNGDKVGCFALSEPGN 148

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  +   S+A ++LA  +  +    +  ++     
Sbjct: 149 GSDAGAASTTARLDGDQWMLNGTKAWITNGFESEAAVVLATTDKSLKHKGISAIIVPKPT 208

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +         N+   P +  KI ++ LD+  + ++
Sbjct: 209 KGLELGKKEDKLGIRGSSTCSLIFEDCQVP---KANLLGEPGQGFKIAMMTLDAGRIGIA 265

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A  YA +R   G  L+    ++  +A++AL + AA  L++R A   D
Sbjct: 266 SQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLDAARLLTWRAAWLKD 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ ++EAA A++ A     +          + ++ +GG GY+ +    RHYR++    
Sbjct: 326 NHKNFTKEAAMAKLAASEAATYLS-------HQCIQILGGMGYVSDMPAERHYRDARITE 378

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K   L
Sbjct: 379 IYEGTSEIQRLVIAGNLIKELGL 401


>gi|169826557|ref|YP_001696715.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168991045|gb|ACA38585.1| Acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 378

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 138/379 (36%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ER +  EF      LL++    GL                 ++ I    L  ++ + 
Sbjct: 26  PWVERMEAGEFP---RELLQQMGELGLMGITTPEELGGSGMDFTSYIIAIHELSKVSAVM 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +         K + PK+ + EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPIIYFGNEEQKKRYVPKLAAGEY-------------LGAFCLTEPGA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ S+  +  D         +  +   +D +I+ A          +   + +   
Sbjct: 130 GSDAGSLQSKAVRDGDEYVINGSKVFITNGGEADVYIVFASTNPTEKTRGISAFIVEKGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G   + TV+L F N         N+     E  KI +  LD   + ++
Sbjct: 190 PGLIIGKDEHKMGLHGSRTVQLTFDNCRIPAD---NLLGEEGEGFKIAMANLDVGRIGIA 246

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +       A  YA+ R   G  ++ Q  +   +AD+A  + ++  L +R A+   
Sbjct: 247 AQALGIAEAALEAASAYAKERVQFGKPIVAQQGVSFKLADMATAVESSKLLVYRAADLRA 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +      EA+ A       K +  + A     EA++  GG GY E+  + R++R++    
Sbjct: 307 KGLPCGAEASMA-------KLFASRTAVQTAIEAVQVFGGYGYTEDYPVERYFRDAKVTE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 360 IYEGTSEIQRLVISKHLLK 378


>gi|167561592|ref|ZP_02354508.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
 gi|167568828|ref|ZP_02361702.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 595

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 98/493 (19%), Positives = 183/493 (37%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVTTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ + E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKVYLPKLVAGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFIPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ + + 
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVTEFVE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+ 
Sbjct: 478 AEGVKPEMSEFVA 490


>gi|256822625|ref|YP_003146588.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256796164|gb|ACV26820.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 565

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 85/488 (17%), Positives = 177/488 (36%), Gaps = 55/488 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEFHP-AWHALLRR 109
            +       + +   +E  + A   T  L      G+       D V   P  +    + 
Sbjct: 28  ADFSEFDAELYNAILEEAGKFA---TGILQPINRSGDEEGCQFDDGVVTTPKGFKEAYQA 84

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
            +  G         +      ++  +    ++  A        S +  +  ++       
Sbjct: 85  YVEGGWQSLTASAQYGGQGLPKSLHVLVEEMFYSANSSFCLYGSLTAGAYHLLQAHADDV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +   +  K+ S E+             +  + LTE   G+D+  + ++ +   DG Y LS
Sbjct: 145 IKDQYLAKLISGEW-------------SGSMCLTEAHAGSDLGILKTKAEPQEDGTYKLS 191

Query: 230 GHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA++         +  FLVP+ + +     G  NG+   
Sbjct: 192 GSKIFITGGEHDMTDNIIHLVLARLPDAPAGPKGISLFLVPKFMVNDDGSLGERNGIRCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G ++++T  +   +  GF++G  +     +  M  L  L   +  V    +S  
Sbjct: 252 SIEHKMGIKASSTCVINMDDATGFIIGGPHQGLRCMFTMMNLERLSIGLQGVGLGEMSYQ 311

Query: 334 EAIHYARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A  YA  R             +I    ++R +  +     A  AL+  L    DEA   
Sbjct: 312 QAFDYANDRLQGRAEGVEGTAPIIRHGDVQRMLKTMQAYTQAGRALAVWLGAWLDEAFHS 371

Query: 387 SEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +EA        A ++ P+ K +   +   V     +  GG GY+ E  + +H R++   
Sbjct: 372 EDEAVVSKAQNMAALLTPVAKAFFTDIGYEVCTIGQQVFGGHGYVREWGMEQHVRDARIA 431

Query: 441 SILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            I  G+     LD++   ++        +L + +  D+ S       ++    S  +E +
Sbjct: 432 QIYEGTNGIQALDLIGRKIVSNKGAFLSELLTDMRDDMQSFSDTSHKVI--LASQLEELE 489

Query: 499 GLARFLTE 506
            L+  + E
Sbjct: 490 SLSIKIVE 497


>gi|149278901|ref|ZP_01885036.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149230520|gb|EDM35904.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 393

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 145/390 (37%), Gaps = 32/390 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAH 133
             A  N        P    WD+ +  P   +L +     GL   +   S+       Q +
Sbjct: 31  DFAERN------IRPNVMEWDEAQHFPV--SLFKELGALGLMGVLVPESYGGSGFGYQEY 82

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                 +  +       + + +      +           W PK+ + E+          
Sbjct: 83  VDVIVEVAKVCGAIGLSVAAHNSLCTGHILAFANESQKLRWLPKLATAEW---------- 132

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                  GLTE   G+D   +T+   +  D         W       D  +++ +   + 
Sbjct: 133 ---IGAWGLTEANTGSDSLRMTTTAVQDGDEYVINGAKNWITHGKTGDLAVVMVRTGEQG 189

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDM 312
               +  ++ +    G    + +NK+G R++ T E+ F N        L N   G  + M
Sbjct: 190 DSKGISAIVVERGTPGFSAGKKENKLGMRASETTEMIFDNCRVPKENLLGNAGEGFKQAM 249

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K+L    +  A +S+   + +   A+ YA+ RH  G  +     +   +AD+A +I AA 
Sbjct: 250 KVLDGGRISIAALSLGIAKGAYEAAVAYAKERHQFGQPIASFQGISFKLADMATEIEAAE 309

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L  + A+  +     ++E+A A       KY+  ++A     EA++  GG GY ++  +
Sbjct: 310 LLIRQAADFKNRGIPVTKESAMA-------KYFASEVAVRCATEAVQIFGGYGYTKDFPV 362

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            ++YR+S   +I  G+     + +   + K
Sbjct: 363 EKYYRDSKLCTIGEGTSEIQKIVIAREVLK 392


>gi|320354114|ref|YP_004195453.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
 gi|320122616|gb|ADW18162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 382

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 129/360 (35%), Gaps = 22/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L+      L        +          + A        +      + S      V 
Sbjct: 39  REILKDIAKADLFSIFVPEEYGGFGGGCFEVVLALEELARGCVGVATSFAASALGIFPVL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  +    + + P I S              S     GLTE   G+D + I +      D
Sbjct: 99  IAGSEEQKQKYMPDIASG-------------SRWAAFGLTEANAGSDASGIRTTAVLDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   +W  +   S  + ++A  +   G       + +    G  Y + ++K+G R+
Sbjct: 146 EWVLNGTKQWITNGGESQIYTIVALTDPNKGARGASIFVVEDGDPGFSYGKKEDKMGIRA 205

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +AT EL   +        +    TG +  MK   +     A + V   + +L EA+ YA+
Sbjct: 206 SATRELILKDCRIPKDRLVGKRGTGFITVMKTLDMSRPGIASLGVGLAQAALDEAVTYAK 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R      +I    ++  +AD+A+ + AA +L +  A   D+             ++ + 
Sbjct: 266 QRVQFAKPIISFQAVQHILADMAIQLEAARSLVYAAAKHIDKHPKD------MSKVSSMC 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +   MA  V  +A++ +GG GY++E  + +  R++    I  G+       V   L K
Sbjct: 320 KVFATDMAMKVTTDAVQVLGGYGYMKEYPVEKMMRDAKILQIYEGTNQIQRNVVGQELNK 379


>gi|116254744|ref|YP_770580.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259392|emb|CAK10527.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 375

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 84/398 (21%), Positives = 151/398 (37%), Gaps = 37/398 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +S  A++ AR             PG  + D+    P     L+     GL   +   ++ 
Sbjct: 10  ISDLARDFARD---------RLAPGAAKRDREHLFP--REELKEMGELGLLGMLVPEAYG 58

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +   +  L   T    + + PK+ S E+ 
Sbjct: 59  GSDTGVVAYAAALEEIAAGDGPCSTIMSVHSSVGCVPILKFGTEEQRQRFLPKLASGEW- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF 243
                         G  LTE + G+D + + ++ ++  D  Y L G K F++S  + D  
Sbjct: 118 ------------IGGFALTEPQAGSDASNLKTRARRDGD-YYVLDGSKQFITSGKNGDVI 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +  VG   +   +      G    R++ K+G  S+ T ++ F++        L 
Sbjct: 165 IVFAVTDPDVGKKGITAFIVPTDTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  +V   R +   A  YAR R   G  +++   +   +A
Sbjct: 225 AEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARDYARERIAFGKPIVEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L F  A+  +       EA+ A       K +  +MA  V ++A++  G
Sbjct: 285 DMAVRIEAARQLVFHAASLREAGLPCLSEASMA-------KLFASEMAERVCSDAIQIHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 338 GYGYMADYPVERIYRDVRICQIYEGTSDVQRMVIARNL 375


>gi|219363163|ref|NP_001136884.1| hypothetical protein LOC100217040 [Zea mays]
 gi|194697474|gb|ACF82821.1| unknown [Zea mays]
          Length = 390

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 131/380 (34%), Gaps = 24/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
            A  P     D     P    L R      LH       +  +      H I    +   
Sbjct: 29  EAIAPRAAAIDASNHFPRDVDLWRLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEITRA 88

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +     P     + PK+ S E+                L ++
Sbjct: 89  SGAVGLSYGAHSNLCINQLVRHGNPEQKLKYLPKLISGEH-------------IGALAMS 135

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K+  G        W  + P +   ++ A+ +   G   +   + 
Sbjct: 136 EPNSGSDVVSMKCKAEKVDGGYVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFII 195

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDS 320
           +    G    +  +K+G R + T EL F N F      L      V  M     L  L  
Sbjct: 196 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVL 255

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   
Sbjct: 256 AAGPIGLMQACLDVVLPYVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDC 315

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K   ++             +  + A  V  +A++C+GG+GYI E    R  R++   
Sbjct: 316 DNGKVDRKD-------CAGVILFAAENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLF 368

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 369 EIGAGTSEVRRMIIGRELFK 388


>gi|163786292|ref|ZP_02180740.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteriales bacterium ALC-1]
 gi|159878152|gb|EDP72208.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteriales bacterium ALC-1]
          Length = 380

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 131/371 (35%), Gaps = 26/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D  +  P    L+R+    G    + D  +        ++ +    L  +    +  +  
Sbjct: 32  DNAQTFPD--ELVRKMGELGFMGIMVDPKYGGSGMDAISYVLIMEELSKIDASASVMVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +         + +  K+ + E                   L+E   G+D  +
Sbjct: 90  NNSLVCYGLEAYGNEEQKEKYLTKLATGEC-------------IGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   ++ ++++AQ +   G   +   + +    G    
Sbjct: 137 QRTTAIDKGDHYVLNGTKNWITNGGRAEIYLVIAQTDKHKGSHGINAFIVEKGTPGFDIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRV 330
             ++K+G R + T  L+F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKEDKLGIRGSDTHTLQFNDVKVPKENRIGDDGFGFRFAMKTLSGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  + +   +   +AD+  +I AA  L  R A   D+  +    +
Sbjct: 257 AYELALKYSKERKAFGTEICNHQAIAFKLADMHTEIEAARMLVMRAAWDKDQGNNYDMSS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  K+A     EA++  GG+G+++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASKVAMEHTVEAVQIHGGNGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEKG 461
            + +   + +G
Sbjct: 370 KIVISRGVIRG 380


>gi|28869926|ref|NP_792545.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853171|gb|AAO56240.1| acyl-CoA dehydrogenase, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 447

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 142/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    PA   + R+    G+        +  
Sbjct: 69  ALGETIDMLRDQLQSFVAAEISPRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGG 126

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + PK+ S E+  
Sbjct: 127 AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEH-- 184

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 185 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVI 233

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 234 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGAL 293

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  IAD+
Sbjct: 294 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADM 353

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 354 YTHLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 406

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 407 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 447


>gi|260907811|gb|ACX53707.1| isovaleryl coenzyme A dehydrogenase [Heliothis virescens]
          Length = 416

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 145/376 (38%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P   + DK           ++    GL     +  +     K + H +    L   +   
Sbjct: 57  PKAAQIDKENNFAKLREFWKKCGEMGLLGITANPEYGGTGGKYSDHCVIMEELSRASGGI 116

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 117 ALSYGAHSNLCVNQINRNGTDEQKRKYLPKLCSGEH-------------VGALAMSEPGA 163

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +        +   L + 
Sbjct: 164 GSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDTSSKPQHGISAFLIEK 222

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +       +LG++N     +     L  L  A 
Sbjct: 223 GFPGFSTAQKLDKLGMRGSNTCELVFEDCKVPATNILGEVNKGVYVLMSGLDLERLVLAA 282

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ ++  A  YA  R   G  + +  +++  +AD+   ++A  +  + +A + DE
Sbjct: 283 GPVGLMQAAIDTAFAYAHTRKQFGKSIGEFQLLQGKMADMYTTLSACRSYLYSVAKACDE 342

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++             +C + A  V  +A++ +GG+GYI +    R  R++    I
Sbjct: 343 GHVNSKD-------CAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRILRDAKLYEI 395

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   +
Sbjct: 396 GAGTSEVRRMLIGRAI 411


>gi|315182695|gb|ADT89608.1| hypothetical acyl-CoA dehydrogenase [Vibrio furnissii NCTC 11218]
          Length = 384

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 91/386 (23%), Positives = 144/386 (37%), Gaps = 28/386 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    +LR +   G            +   +           M 
Sbjct: 22  ERLAPMAATWDEEHIFP--KDVLREAGELGFLSLYTPEDEGGLGLSRLDASLIFEQLAMG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M+       MVA   T      + PK+ + E+                  LTE
Sbjct: 80  CTSTTAFMTIHNMVTWMVASFATADAKAQFCPKLVTGEW-------------LGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D A++T+   K+SDG Y LSG K F+S    +D  +++A+  G  G   +   + 
Sbjct: 127 PNAGSDAASLTTSATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
               +G+ Y R + K+G  S  T  + F          L     G    MK L    ++ 
Sbjct: 185 PAQADGITYGRKEPKMGWNSQPTRSVTFDKVHVPASALLGEEGQGFTFAMKGLDGGRINI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV   + +L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  
Sbjct: 245 ATCSVGTAQQALNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    +      A     + K +   +   V   A++  GG GYI+E  + RH+R+   +
Sbjct: 305 DRGDPQ------ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVH 358

Query: 441 SILLGSGNAMVLDVL-NLLEKGTNLF 465
            IL G+   M L V   LL  G  L 
Sbjct: 359 QILEGTNEIMRLIVARRLLSDGGELL 384


>gi|83721478|ref|YP_441121.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167579871|ref|ZP_02372745.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
 gi|257140217|ref|ZP_05588479.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83655303|gb|ABC39366.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 595

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 183/493 (37%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIDAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 478 AEGVKPEMSEFIT 490


>gi|329941078|ref|ZP_08290357.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329299609|gb|EGG43508.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 385

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 130/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      S+          +            +
Sbjct: 33  PHAAAVDEEARFP--QEALDALVANDLHAVHVPESYGGAGADALATVLVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPLILSGSEELKKKYL-------------GPLAKGDAMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPTKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +   S
Sbjct: 258 GIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLADMAMKIEAARQLTYAAAAKSERGDS 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|294651448|ref|ZP_06728762.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822694|gb|EFF81583.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 593

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 89/519 (17%), Positives = 192/519 (36%), Gaps = 58/519 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWDK--VEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G RW+   V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARWENGDVFTPAGFKEAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   +    +    +
Sbjct: 89  GGWIGLGADEEWGGQAMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L +     G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNPVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA  R                  ++    ++R + ++  +  A+ A +  +    D   
Sbjct: 316 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              + ++  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++   +++ G     +  + + +D  ++    +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI-RDFANTLDADLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           E + + +F+ E+ A      +SAA  Y   +  ++  ++
Sbjct: 495 EIEAVTQFIIEQAAENVEFPNSAAVDYLHAVGLLSFAYM 533


>gi|308478355|ref|XP_003101389.1| hypothetical protein CRE_13526 [Caenorhabditis remanei]
 gi|308263290|gb|EFP07243.1| hypothetical protein CRE_13526 [Caenorhabditis remanei]
          Length = 418

 Score =  289 bits (740), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 134/373 (35%), Gaps = 27/373 (7%)

Query: 95  DKVEFHPAWHAL---LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           DK++    W  L    ++    GL        +        +H I    L   A   A  
Sbjct: 62  DKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSAMNYFSHVIAMEELSRAAGGIALS 121

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S    + +    +    K + PK+ S E+                L ++E + G+D
Sbjct: 122 YGAHSNLCVNQICRNGSEEQKKKYLPKLISGEHMG-------------ALAMSEAQAGSD 168

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + ++  + +K  D         W  + P +D  ++ A+ +       +   L + +  G 
Sbjct: 169 VVSMKLRAEKKGDKYILNGTKFWITNGPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGF 228

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R + T EL F N        +G +      +        L  +   +  
Sbjct: 229 SQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGVGKGVYVLMTGLDYERLVLSGGPLGL 288

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R   G  +    +++  +AD+   + A+ +  + +A + D+    +
Sbjct: 289 MQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGTVSN 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++             +  +    V  +A++ +GG+GYI +    R  R++    I  G+ 
Sbjct: 349 KD-------CAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTS 401

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 402 EVRRLIIGRALNK 414


>gi|11499639|ref|NP_070881.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304]
 gi|2648474|gb|AAB89194.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304]
          Length = 409

 Score =  289 bits (739), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 140/374 (37%), Gaps = 27/374 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             E +D+ E  P    L +++   G     +   +          I     +  A    G
Sbjct: 53  RAEEYDRNEEFP--FDLWKKACELGFIGVHFPEEYGGAGMGVLENILIVEEFCRADSTIG 110

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  S  S+ +V    +    K+  PK+                        TE   G+
Sbjct: 111 SAIILSDFSSEVVMRFGSEEQKKEVLPKVAGG-------------KAITAGCYTEPEAGS 157

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSP 267
           D+ AI ++ +K  D         +  +  ++D +++LA  +             L     
Sbjct: 158 DLTAIKTKAEKDGDEWVINGSKTFITNGTIADYYVVLAVTDPNAQPRYRGFTTFLVKKDT 217

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   ++  K+G R++ T E+ F +       ++G LN     V +      ++ A  +
Sbjct: 218 PGLKTTKIGGKLGIRASPTAEVVFKDVRVDDSAVIGQLNRGFYQVLEFFDESRIEIAAQA 277

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +    ++Y ++R   G  +     ++  IAD+   + AA  L ++ A ++D+ +
Sbjct: 278 LGIAQGAFDRLVNYVKQRKQFGQPIAAFQALQHRIADLKTQLEAARLLIYKAAWNYDQGR 337

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +  + KY+  K+A  +  EA++  GG GYI E  + R +R++    I  
Sbjct: 338 -------IDPGLTSMAKYYAGKLAVKICDEAVQMHGGYGYIAEYEVERFFRDAKITEIYE 390

Query: 445 GSGNAMVLDVLNLL 458
           G+    +  +   +
Sbjct: 391 GTKEVQLNTIARDI 404


>gi|83719195|ref|YP_442364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|257138566|ref|ZP_05586828.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83653020|gb|ABC37083.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 593

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 140/517 (27%), Positives = 233/517 (45%), Gaps = 37/517 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRA-SDELDRLASRADKNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP + AL R +  +    ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++   ++  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVN 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR + AEA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +   +AA   RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488
           AR  R++   SI  G+ N + LDV   +++   L   L + L   L ++       T LR
Sbjct: 426 ARVLRDAHLGSIWEGTSNIVALDVARAVKREGAL-APLRAFLLDTLDAARLPGASATRLR 484

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            ++    +         +   +  SA+ALY      I
Sbjct: 485 RALDRASDAIAHVAQTGDDAFVRQSASALY-HATTAI 520


>gi|221310335|ref|ZP_03592182.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314659|ref|ZP_03596464.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319582|ref|ZP_03600876.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323858|ref|ZP_03605152.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|1303933|dbj|BAA12589.1| YqiN [Bacillus subtilis]
          Length = 378

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 130/364 (35%), Gaps = 27/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++    GL        +        ++ +    +  ++      L   +    + +
Sbjct: 37  FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + P + S ++                  LTE   G+D  ++ +   K  
Sbjct: 97  LYFGNEEQKMKYIPNLASGDH-------------LGAFALTEPHSGSDAGSLRTTAIKK- 142

Query: 223 DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G Y L+G K F+++  + D +I  A      G   +   + + +  G    + + K+G 
Sbjct: 143 NGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGL 202

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T EL F N        L     G    M  L    +  A  ++     +L  A+ Y
Sbjct: 203 YGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  +     +   +AD+A    AA  L +  A+  +   +  +EA+ A+  A 
Sbjct: 263 AKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQFAS 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                          +A++  GG GY+++  + R  R++    I  G+     L +   L
Sbjct: 323 DAAVK--------ALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYL 374

Query: 459 EKGT 462
             GT
Sbjct: 375 LGGT 378


>gi|320450375|ref|YP_004202471.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150544|gb|ADW21922.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 409

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 145/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     ++    P  + +D+ E  P    ++ +    GL  +I   
Sbjct: 32  DFSLTEEQRQLQALARRFAKEVIL--PVAQEYDEKEEVP--WPVIEKLHEVGLLNAIIPE 87

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K   ++        A +    +   S    + V L       + +        
Sbjct: 88  EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGNEEQKRRFLK------ 141

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 142 -------PLTEKPALAAFALSEPGNGSDAAALKTRAVRQGDYYILNGTKMWISNGGEAEW 194

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A +   +    V  L+ +    G    ++  K+G R++ T EL F      +   L
Sbjct: 195 VVVFATLNPELRHKGVVALVVEKGTPGFSAVKIHGKMGQRASGTYELVFEEVKVPVQNRL 254

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    +  A  SV   R +L EA  YA+ R   G  +     ++  +
Sbjct: 255 GEEGEGFKIAMNTLNKTRIPVAAGSVGVARRALDEAKKYAKEREAFGQPIASFQAIQFKL 314

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + I  A   ++  A   D+    +  +A       I K +  ++A     +A++  
Sbjct: 315 ADMMIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIH 367

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  + +  R+   N I  G+     L +   L
Sbjct: 368 GGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHL 406


>gi|332876399|ref|ZP_08444168.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|332735409|gb|EGJ66467.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 384

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLDITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     L +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQLIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|291295150|ref|YP_003506548.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470109|gb|ADD27528.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 381

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 149/402 (37%), Gaps = 27/402 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +EL ++A     +     P    +D+ E  P    L+ +    GL  +I   
Sbjct: 4   DFTLTDEQKELQKLARRFARE--QIAPVAAEYDRKEEVP--WGLVEKLHAVGLLNAIIPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           ++  +      ++          +    +   S    + + L  T    + +  K+    
Sbjct: 60  AYGGLGLGMLEEVIIGEELAWGCMGIYTIPMASDLGITPILLAGTHEQKQRFFKKLT--- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                     +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 117 ----------EKPALAAFALSEPGNGSDAAALRTRAVRDGDHYVLNGTKTWISNGGEAET 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V   +    V  L+ +    G    +L  K+G R++ T EL F +    +   L
Sbjct: 167 VVVFATVAPELRHKGVVALVVEKGTPGFKANKLHGKMGQRASGTYELVFEDCRVPIENRL 226

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M+ L    +  A  S+   R +L EA  YA+ R   G  + +   ++  +
Sbjct: 227 GQEGDGFKIAMQTLDKTRIPVAAGSLGVARRALEEATKYAKEREAFGKPIAEFQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ + +  A   ++  A   D  +  +  AA A+  A        +MA     +A++  
Sbjct: 287 AEMLMGLETARTYTYYAAWLVDTHQPHAHAAAIAKAYA-------SEMAFEAANQAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY+ E  + +  R+   N I  G+     L +   + KG
Sbjct: 340 GGYGYMHEYPVEKLLRDVKLNQIYEGTNEIQRLIIARHILKG 381


>gi|299770620|ref|YP_003732646.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700708|gb|ADI91273.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 384

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 142/363 (39%), Gaps = 28/363 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQIIIAKN 377

Query: 458 LEK 460
           + +
Sbjct: 378 MIR 380


>gi|291562703|emb|CBL41519.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SS3/4]
          Length = 383

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 143/384 (37%), Gaps = 38/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +   +G       + +         + +    L  +    
Sbjct: 26  PLAQEVDEEERFPV--ETVEKMAKNGFLGIPVPKEYGGQGCDPLTYAMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCMDPIQTFGTEEQKQKFL-------------VPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLL 262
           GTD     ++     D  + L+G K F+++   +D +I++A      +       +   +
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKYADTYIVIAVTGTVEKRGKMQKEISAFI 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G  +   + K+G R +AT EL F++     +   N+     E  KI ++ LD  
Sbjct: 190 VEKGTPGFTFGTKEKKMGIRGSATYELIFTDCR---IPKDNLLGKKGEGFKIAMHTLDGG 246

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + LAE      I Y + R   G  +      +  +AD+A  + AA  + +R 
Sbjct: 247 RIGIAAQALGLAEGALDRTIAYVKERKQFGRTIGQFQNTQFQLADMATKVKAAQMMVYRA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +    K+ S EAA A       K +  ++A  V  +A++  GG GYI E  + R  R+
Sbjct: 307 AMAKATQKTYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYIREYDVERMMRD 359

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 360 AKITEIYEGTSEVQRMVISGALLK 383


>gi|332662453|ref|YP_004445241.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331267|gb|AEE48368.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 381

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 144/379 (37%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+V   P    L     H G    +    +          I             
Sbjct: 26  PHVMEWDEVSHFPL--DLFHSMGHYGFLGVLVPEHYGGAGLGYQEYITVIEEIAQVCGSI 83

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  + + +    + +           + PK+ S E+                 GLTE   
Sbjct: 84  GLSVAAHNSLCTNHILSFGNEEQKHQYLPKLASGEW-------------IGAWGLTEPNT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   +    ++  D  Y ++G K F++   S    +++ +    +    +   + +  
Sbjct: 131 GSDAGRMKCVAERDGD-YYVINGSKNFITHGASGNVAVVIVRTGELLDSHGMSAFVVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    + +NK+G R++ T E+ F N        L     G ++ MKIL    +  A +
Sbjct: 190 TPGFLAGKKENKLGMRASETAEMIFDNCRVHKSQMLGEEGEGFIQSMKILDGGRISIAAL 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +   ++ Y++ RH  G  + +   +   +AD+A  I A+  L  +     D  
Sbjct: 250 SLGIARGAYLASVKYSKERHQFGQAIANFQAISFKLADMATKIEASELLVRKAGELKDLG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ ++ +A A       KY+  + A  V  +A++  GG GYI++  + + YR++   +I 
Sbjct: 310 QNVTKLSAMA-------KYFASETAVEVSTDAVQIHGGYGYIKDFPVEKFYRDAKLCTIG 362

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            G+     L +   + KG 
Sbjct: 363 EGTSEIQKLVISREILKGR 381


>gi|110639765|ref|YP_679975.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282446|gb|ABG60632.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 351

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGH 150
           +WD+V+  P    L  +    GL   +    +          I A      +   +    
Sbjct: 2   KWDEVQEFPV--DLFHKMGEFGLLGVLVPEQYGGAGMGYFEYITALEEISKVCGSIGLSM 59

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               S+ +  ++A          + P + + ++                  LTE   G+D
Sbjct: 60  AAHNSLCTGHILA-FGNEEQKAKYLPLLATGKW-------------IGAWALTEANTGSD 105

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
              + +  ++  D  + L+G K F++   S +  ++LA+             + +    G
Sbjct: 106 SGNMKTVARQDGD-YWILNGSKNFITHAKSSNVVVVLARHADSEDKKFSSAFIIEKGTEG 164

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVS 326
           L + R +NK+G R++ T EL   N        L N+  G  + MK+L    +  A +S+ 
Sbjct: 165 LTHGRKENKMGMRASETCELLLDNVRVHKSQLLGNIGDGFKQAMKVLDGGRISIAALSLG 224

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +   A+ Y++ R      + +   +   + D+A +I AA  L+++ A+   + +  
Sbjct: 225 IAQGAYEAALQYSKERQQFNQPIGNFQGISFKLVDMATEIEAARLLTYKAADMKMKGQPM 284

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EAA A       K +  +++  V  EA++  GG GY ++  + + YR++   +I  G+
Sbjct: 285 TREAAMA-------KLYASEVSVRVANEAVQIFGGYGYTKDYPVEKFYRDAKLCTIGEGT 337

Query: 447 GNAMVLDVLNLLEK 460
                + +   L+K
Sbjct: 338 SEIQKIVIAKSLQK 351


>gi|52080517|ref|YP_079308.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52785896|ref|YP_091725.1| YngJ [Bacillus licheniformis ATCC 14580]
 gi|319645521|ref|ZP_07999753.1| YngJ protein [Bacillus sp. BT1B_CT2]
 gi|52003728|gb|AAU23670.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52348398|gb|AAU41032.1| YngJ [Bacillus licheniformis ATCC 14580]
 gi|317392407|gb|EFV73202.1| YngJ protein [Bacillus sp. BT1B_CT2]
          Length = 386

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 140/406 (34%), Gaps = 36/406 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +ELAR             P  E  D+    P      ++    GL    +  S+   
Sbjct: 10  QMIRELARDFAK-----QEIAPHAEHVDRTGEFPI--ETFKKMGELGLLGIPFPESYGGS 62

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +            +     A+ +    T    +++            
Sbjct: 63  GGDTISYALSVEEIGKACGSTGLSYAAAVSLGAAPIYYFGTEEQKQEYL----------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+         GLTE   G+D     ++ +   D         W  ++  +   I+ 
Sbjct: 112 --VPLATGRALGAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNAGFARTVIVT 169

Query: 247 AQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A       G  ++  ++      G   +   +K+G R + T +L   N        L   
Sbjct: 170 AVTGIDDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSP 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
               +       LD   +S++ + V +A+     A+ YAR R   G  +     ++  +A
Sbjct: 230 EKGFKQFLN--TLDGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A++I  A  +  + A   D+ +  ++EAA+A       K +  +MA     ++++  G
Sbjct: 288 DMAMEIELARNMVLKAAWLKDQGRPFTKEAAFA-------KLYASEMAFRTCNQSIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G GY++E  + R  R++    I  G+     L +   L  G    +
Sbjct: 341 GYGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLGIGKQALK 386


>gi|227500411|ref|ZP_03930473.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227217474|gb|EEI82793.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 561

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/428 (20%), Positives = 160/428 (37%), Gaps = 42/428 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ +  P    ++R     GL    +   +        H   A           G + S 
Sbjct: 32  DQSKEFP--KEIVRLMGEMGLMGIPFPEEYGGAGLTNEHYAIAVEELSRVDGGVGVICSA 89

Query: 155 SVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +     +         + +               P+       G GLTE+  G+D A 
Sbjct: 90  HTSLGTWGINEFANEEQKEKYL-------------RPLLTGKSIGGFGLTEENAGSDSAG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++ P +  +++ A      G   +   + D    G  +
Sbjct: 137 TQTTAVLKGDH-YILNGKKIFITNAPEAQTYLVTAVTTPGKGNHGISMFIVDKDFEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               +K+G RS+ T EL F+N        L     G    M I   LD   + ++   + 
Sbjct: 196 SEPYDKLGIRSSVTAELHFNNVKVPKENLLGEEGKGFKYAMMI---LDGGRIGIASQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A  Y   R   G  +         +AD+A ++ AA  L +  A   D+ +  
Sbjct: 253 IAQGAYESAKDYGLNREQFGQAIARMQHNAFILADMATELKAARLLIYDAARKKDKHEPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++AA A       K +   MA  + ++A++  GGSG+I+   + R+YR+S    I  G+
Sbjct: 313 GKDAAMA-------KLFASDMAEKLTSKALQLYGGSGFIKGVDVERYYRDSKITQIYEGT 365

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              M L + + +       E    T++++    G++ + I +       ++K  A+ L E
Sbjct: 366 NEIMRLVISSYILPREEKKEVKKETVKKNKSQVGERKLQIFK------GDEKQAAKKLVE 419

Query: 507 KIALASSA 514
             AL +  
Sbjct: 420 --ALKAQG 425


>gi|53724999|ref|YP_102032.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67642503|ref|ZP_00441259.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|121600694|ref|YP_994044.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385804|ref|YP_001028292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126449791|ref|YP_001081936.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|251767556|ref|ZP_02267698.2| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|254177110|ref|ZP_04883767.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254203718|ref|ZP_04910078.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254208693|ref|ZP_04915041.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|52428422|gb|AAU49015.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121229504|gb|ABM52022.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124293824|gb|ABN03093.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126242661|gb|ABO05754.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147745230|gb|EDK52310.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147750569|gb|EDK57638.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|160698151|gb|EDP88121.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238523668|gb|EEP87105.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|243062317|gb|EES44503.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 595

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 182/493 (36%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIDAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDLSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +     
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEA 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++EA          ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 478 AEGVKPEMSEFIT 490


>gi|313216949|emb|CBY38153.1| unnamed protein product [Oikopleura dioica]
          Length = 616

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 126/564 (22%), Positives = 217/564 (38%), Gaps = 58/564 (10%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFPSV----VHKELELLGEYVLSCTAQEL 73
            +      QP   +  N Y  + LL   ++ + P      +  +L+  GE +++     L
Sbjct: 42  HEKTGQFVQPKPVL-KNPYDGNELLQDFILRHCPPEHFERIDADLKQCGERIVN-EIDAL 99

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
                   P L      GER D++    AWH   R S  +GL    ++       R    
Sbjct: 100 GDECERQQPYLRRTDGWGERIDEIVVSNAWHEQHRISAEEGLIAIGYENESGSFSR---- 155

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             + A+  L       +    ++T  + +                F  E      +   +
Sbjct: 156 VHQMAKNLLTGASSGLYNCPLAMTDGAAMIT------KSKRGDHEFLEEAYQNLTSRNGE 209

Query: 194 TSVAIGLGLTEKRGGTDIA-AITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                G  +TEK GG+D+  A  ++ +   +   Y LSG+KWF S+  S     LA++  
Sbjct: 210 QFWTSGQWMTEKAGGSDVGDATHTEARWNEEKNCYELSGYKWFTSAITSQMTFTLARIID 269

Query: 252 ------RVGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
                 + G   +         E+GS NG+   ++K K+G +   T EL        L+G
Sbjct: 270 DEFDAVKEGSRGLSMFYLKVRDENGSLNGIQVHKMKKKLGTKQLPTAELILDGCEAHLVG 329

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +  M  +  + +A+ + S MR  +  A  YA +R      L + P     +A
Sbjct: 330 EPGRGIALISGMLTVTRIHNAVAACSFMRRMMHLARDYATKRTAFKETLSNHPAHVSVLA 389

Query: 361 DIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  D+ AA  LS  +   F   +  ++ S E    RI+ P+ K    K    V +E +E
Sbjct: 390 RMEADVRAAELLSLEVTRLFGKCENGQASSIEEDLMRILTPLAKAQTAKQGVVVCSEGLE 449

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDL 476
           C GG GYIEE  I R  R++    I  G+   M LDVL  ++K   +  + L   +++ L
Sbjct: 450 CFGGQGYIEETPIPRLLRDAQVLPIWEGTSTVMSLDVLRSIQKSSGSSLQALIGDIQKKL 509

Query: 477 GSS---------GKKVITILRDSISLCKEDKGL--------ARFLTEKIALASSAAALYR 519
            ++            + T ++D +    + +          AR     +A    A  L  
Sbjct: 510 SAANSSEKLASCRNTIATSVKDVLRFLAQVEKESMTFQLKSARDFAFSLAKLYQATLLMD 569

Query: 520 AGM-----NDI--ADVFLENRFLD 536
             +     +DI  A++F +NR  D
Sbjct: 570 HAVFTRKESDIYAANLFSKNRLND 593


>gi|326382721|ref|ZP_08204411.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198311|gb|EGD55495.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 380

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 144/416 (34%), Gaps = 40/416 (9%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           +A  PS   ++L  L +   +   +ELA                      +E H     L
Sbjct: 1   MARRPSWETEDLTALRDMARAFCEKELAPNTERF----------------IEQHHVDRDL 44

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             ++   GL C      +       AH+         A   +      +   A  +    
Sbjct: 45  WLKAGEVGLLCMSIPEEYGGGGGSFAHEAVLIEEQARAVDSSWGQSLHNGIVAHYILAYG 104

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + W PK+ S E             V   + +TE   G+D+  + ++  K  D   
Sbjct: 105 SEEQKQHWLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKTKAIKDGDDYV 151

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 +  +   +D  I++A+ +   G   +  ++ +    G    R+ +K+G R   T
Sbjct: 152 IDGSKTFITNGGQADVVIVVAKTDSTEGAKGISLIIVETEREGFSRGRILDKVGMRGQDT 211

Query: 287 VELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F+         L      G ++ M  L    L   + SV+GM V+L + + Y + R
Sbjct: 212 AELNFTGVRVPQANLLGDQEGLGFIQLMTQLPQERLIIGVASVAGMEVALEKTLEYTKER 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      K  +A++A +   A           D+   +            ++K+
Sbjct: 272 TAFGRPIYGFQNTKFKLAEVATEAHIARVF-------IDDCIEQHLRGELDIPTVAMSKW 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  + A  V    ++  GG GY+ E  IAR + ++    I  G+   M   +   L
Sbjct: 325 WTTEKAMEVADTCLQLFGGYGYMNEYPIARMWADNRVQMIYGGTNEIMKEIISRAL 380


>gi|50084848|ref|YP_046358.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|15812042|gb|AAL09094.1| DcaA [Acinetobacter sp. ADP1]
 gi|49530824|emb|CAG68536.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 384

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 146/379 (38%), Gaps = 30/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P      + +  P    ++++    GL        +  +      ++  A  L   +   
Sbjct: 25  PREHEVAEKDCIPE--DIIQQMRELGLFGLTIPEEYGGLGITMEEEVNVAFELGQTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   +S + +  T    + + P+  S E             +     LTE   
Sbjct: 83  RSLIGTNNGIGSSGLIIDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPEA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDG 265
           G+D A++ +   K  D  Y L+G K F+++ P +  F ++A+    + G   +   L + 
Sbjct: 130 GSDAASLKTTAVKDGD-FYILNGTKRFITNAPHAATFTVMARTNPAIKGAGGISAFLVEA 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSA 321
           +  G+   ++  K+G + + T ++ F N        +      G    MK+L    L   
Sbjct: 189 NTPGITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIG 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             SV      L +A+HYA  R   G  + +  +++  +AD   +I AA  +    A   D
Sbjct: 249 AYSVGVAERMLNDALHYAVERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ S E       A   K +  +M   V    ++  GG+GYI E SI R YR+     
Sbjct: 309 EGQNISTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYISEYSIERFYRDVRLFR 361

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           +  G+     + +   + K
Sbjct: 362 LYEGTTQVQQIIIAKNMIK 380


>gi|332291244|ref|YP_004429853.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169330|gb|AEE18585.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 380

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 134/371 (36%), Gaps = 26/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D ++  P    L+++    G    + D  +        ++ +    L  +    +  +  
Sbjct: 32  DNIQQFPD--ELVKKMGDLGFMGIMTDPKYGGAGMDATSYVLVMEELSKIDASASVIVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    +    + +  K+ + E                   L+E   G+D  +
Sbjct: 90  NNSLVCYGLEAYGSEEQKQKYLTKLATGEM-------------VGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   SD ++++AQ +   G   +   + +    G    
Sbjct: 137 QATTAIDKGDHYVINGTKNWITNGGRSDVYLVIAQTDREKGHRGINAFIVEKGMEGFEVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             ++K+G R + T  L+F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  + +   +   +AD+ ++I AA  L  + A   D+  +    +
Sbjct: 257 AYELALKYSKERKAFGTEICNHQAIAFKLADMYVEIEAARHLVMKAAWDKDQGNNYDMSS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  K+A     EA++  GG+G+++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASKVAMEQSVEAVQIHGGNGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEKG 461
            + +   + KG
Sbjct: 370 KIVISRGVIKG 380


>gi|284038403|ref|YP_003388333.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283817696|gb|ADB39534.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 386

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 149/375 (39%), Gaps = 28/375 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGH 150
            +WD  ++ P+   L +   + GL   +    +       Q +      L  +       
Sbjct: 29  RQWDDSQYFPS--ELFQELGNQGLMGMLVPDYYGGSGLGYQEYVTAIVELSRVDGSIGLS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +    + + L         + P++ + E+                 GLTE   G+D
Sbjct: 87  MAAHNSLCTNHILLFGNDAQKSAYLPRLAAGEW-------------LGAWGLTEPNTGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNG 269
              + +   +  D  + L+G K F++  +S    +++A+             + +    G
Sbjct: 134 AGNMRTTAHRDGDD-WVLNGAKNFITHGISGHVAVVIARTGEPNTPHNATAFIVERGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
               R ++K+G R++ T E+ F          L  V  G ++ +K+L    +  A +S+ 
Sbjct: 193 FAGGRKEDKLGMRASETAEMIFQECRISDSQRLGAVGEGFIQSLKVLDGGRISIAALSLG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +   A+ YA+ R   G  + +   +   +AD+A  I AA  L+++ A   D  +  
Sbjct: 253 IAYGAYDAAVAYAKEREQFGQPIANFQGISFKLADMATAIEAAKLLTYQAAALKDAGEPV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++E+A A       K +  + A +V  +A++  GG GY ++  + + YR++   +I  G+
Sbjct: 313 TKESAMA-------KLFASETAVSVANDAVQIFGGYGYTKDYPVEKFYRDAKLCTIGEGT 365

Query: 447 GNAMVLDVLNLLEKG 461
                L +   +  G
Sbjct: 366 SEIQKLVISRHILTG 380


>gi|134296918|ref|YP_001120653.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134140075|gb|ABO55818.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 595

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 98/496 (19%), Positives = 181/496 (36%), Gaps = 79/496 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           R+ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  RQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTE--- 474

Query: 493 LCKEDKGLARFLTEKI 508
              E +G+   + E I
Sbjct: 475 -FAEAEGVKPEMVEFI 489


>gi|229542902|ref|ZP_04431962.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229327322|gb|EEN92997.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 380

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 131/375 (34%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+           ++  + GL    +   +        ++ I    +       
Sbjct: 26  PYAREVDETGKMRM--ETFQKLGNLGLLGIPFPEKYGGAGGDTISYCIAVEEIGKACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   AS +    T    + W               PM K       GLTE   
Sbjct: 84  GLSYAANTSLGASPIYYFGTEEQKQKWL-------------VPMAKGEALGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A    R  G  ++  ++    
Sbjct: 131 GSDAGGTRTKAVLDGDEWVINGEKCWITNAEYARQVIVTAVTGKRENGRNIISAIIVPAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+       K+G R + T ++   N       LLGD N              +  A +
Sbjct: 191 APGVAITSPYEKMGVRGSNTCQIVLENVRVPRENLLGDENKGFSQFLYTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +  +A+ YA+ R   G  +     ++  +AD+A++I  A    ++ A   D+ 
Sbjct: 251 SVGIAQAAFEKALRYAKERMQFGQAISKFQAIQFKLADMAMEIDLARNAVYKAAWLKDQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S+EAAYA       K +  +M   V  +A++  GGSGY+ E  + RH R+     I 
Sbjct: 311 KPFSKEAAYA-------KLFASEMGFRVCNQAIQIHGGSGYMREYGVERHLRDIKLMEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 364 EGTSEIQRLVIARKL 378


>gi|47205322|emb|CAF95757.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 383

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 25/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV- 162
             +L+     GL     +  +          I               L     T  + + 
Sbjct: 41  KDVLKSLFEQGLMGIEIEPEYGGTGSTFFSSILVIEELAKVDPSVAVLCDIQNTLINTLF 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A + T    + +  ++               T V     L+E   G+D  ++ ++ +K  
Sbjct: 101 ASLGTAAQKELYLSRL--------------STDVIGSFCLSESEAGSDAFSLKTRAEKHK 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++  +  F+++A V+   G   +   + D    GL   + +NK+G R
Sbjct: 147 DYYVINGSKMWISNAEHAGVFLVMANVDPSAGYKGITCFIVDRDTEGLEICKKENKLGLR 206

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +++T  L F N        LG +         M     +  A   +   +     AI Y 
Sbjct: 207 ASSTCPLNFDNVKVPEKNILGQVGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDHAIPYT 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R   G  + D   M+  IA +A  I AA  L++  A   +  +   +EA  A      
Sbjct: 267 RQRSQFGKRIFDFQGMQHQIAHVATQIEAARLLTYNAARLKEAGRPFIKEACMA------ 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  ++A    ++ +E +GG G+ ++  I ++YR+    +I  G+ N  +  +  +++
Sbjct: 321 -KYFSAEIATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTTNVQLSTMAKIID 379

Query: 460 K 460
           K
Sbjct: 380 K 380


>gi|134299636|ref|YP_001113132.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134052336|gb|ABO50307.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
          Length = 379

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 142/362 (39%), Gaps = 30/362 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L  +    GL    +   +E       ++ I    L  +       + + +   A  +  
Sbjct: 41  LWTKMAEMGLAGIPFSDEYEGAGMDNVSYAIAVEELSRVCASSGVLVSAHTSLCAWPIYA 100

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K +   + S E                 LGLTE   G+D     +      D 
Sbjct: 101 FGTEEQRKKYLVPLCSGE-------------KIGALGLTEPGAGSDAVGQKTTAVLDGDE 147

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G+K F+++   +D ++++A  +       +   + +    G  + + ++K+G R+
Sbjct: 148 -YVLNGNKIFITNGYYADTYVIIAVTDKSKKSKGISSFIVEKGTPGFSFGKKEHKMGIRA 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           +AT EL F N        L       +  ++++ LD   + ++   + +A+     AI Y
Sbjct: 207 SATYELVFENCRIPKANLLGEEGQGFK--QVMMTLDGGRIGIASQALGIAQGALDAAIEY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  +     ++  +AD+A  + AA  + ++ A   D     S+EAA A     
Sbjct: 265 SKIREQFGKPISANQGLQWMMADMATQVEAARLMVYQAAYRKDNKMPYSKEAAMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A AV  +A++  GG GY  E  + R  R++    I  G+     + +   +
Sbjct: 320 --KLFAAETAMAVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGTSEVQRMVIAANI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|109090817|ref|XP_001104844.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
 gi|67971122|dbj|BAE01903.1| unnamed protein product [Macaca fascicularis]
          Length = 432

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 136/369 (36%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSIIQGLFQQGLMGIEVDPKYGGTGASFLSTVIVIEELAKVDASVAVFCEVQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + M+    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTMIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   + D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWVSSAEYAGLFLVMANVDPTIGYKGITTFIVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       +  +        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVP---EAKILGQVGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 308 CFDYTIPYIKERMQFGKRLFDFQGLQHQVAHMATQLEAARLLTYNAARLLEAGKPFIKEA 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 368 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 421 LNTIAKHID 429


>gi|227501345|ref|ZP_03931394.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227216479|gb|EEI81888.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 378

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 147/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     + +    G     +   +  +       + A      A    
Sbjct: 25  PLAIEVDEKHMFPE--ENVAKMQELGFFGIPFAEEYGGIGLDTLTYVLAVEELSKACATT 82

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +  A  +    T    + +   + S E                   LTE   
Sbjct: 83  GVIVSAHTSLCADCINKFGTEEQKQKYLVPLASGE-------------KLGAFALTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +  +   D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 130 GTDASGQKTVAKLDGDH-YVLNGTKIFITNAGYADTYVVFAMTDKEQGTRGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G  +   ++K+G + ++T+EL F +         N+     +  K  +  LD   + +
Sbjct: 189 MEGFDFGTTEDKMGIKGSSTMELIFRDCKVP---KENLLGEEGKGFKYAMQTLDGGRIGI 245

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     AI Y + R+  G  L      +  +A++A+DI +A  L ++ A   
Sbjct: 246 AAQALGIAEGALDKAIKYVKERNQFGRPLAKFQNTQFKLAEMAIDIESARHLVYKAAWLK 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +S +  AA A++ A        ++A  V  +A++  GG GYI E  + R  R++   
Sbjct: 306 DNKESYTVAAAEAKLKAA-------RVAMDVTTKAVQLFGGYGYIREYEVERMMRDAKIT 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+   M++ V   L K
Sbjct: 359 EIYEGTSEVMLMVVSGALLK 378


>gi|17508101|ref|NP_491859.1| Acyl CoA DeHydrogenase family member (acdh-3) [Caenorhabditis
           elegans]
 gi|13384503|gb|AAK21433.1| Hypothetical protein K06A5.6 [Caenorhabditis elegans]
          Length = 419

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 121/307 (39%), Gaps = 30/307 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++  + T    + + PKI               T       L+E   G+D  A+ +  
Sbjct: 130 APLIIQLGTEEQKQKYLPKIV--------------TEAIGSFALSETGSGSDAFALKTTA 175

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D         W  ++  +  F++ A  +   G   +   L D +  G+   + ++K
Sbjct: 176 KKDGDDFVISGSKMWITNAGHAQFFLVFANADSAKGYKGITCFLVDRNQEGVSVGKKEDK 235

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI- 336
           +G R+++T  + F N          +     +  K  I  L++  + +    + LA+   
Sbjct: 236 LGIRASSTCSVHFDNVRVHKSS---ILGEYGKGYKYAIECLNAGRIGIGAQMLGLAQGCF 292

Query: 337 ----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y ++R   G  LID   M+  I    ++I AA  L +  A           EAA 
Sbjct: 293 DQTIPYLQQREQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARMKQNGLPFVREAAM 352

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +  ++A    ++ +E +GG G+ +E  + + YR+S   +I  G+ N  + 
Sbjct: 353 A-------KLFASQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLN 405

Query: 453 DVLNLLE 459
            +  L++
Sbjct: 406 TIAKLVD 412


>gi|126650984|ref|ZP_01723195.1| CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592185|gb|EAZ86234.1| CoA dehydrogenase [Bacillus sp. B14905]
          Length = 380

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 130/375 (34%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+           ++    GL    +   +        ++ +    +       
Sbjct: 26  PYAREVDETSTMRI--ESFKKMAELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    +++               P+ K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYNFGTEEQKQEFL-------------VPLAKGETLGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D     +      D         W  ++  +   I+ A    R  G  ++  ++   +
Sbjct: 131 GSDAGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAVTGKREDGKKIISSIIVPTN 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+      +K+G R + T E+   N       LLGD         +      +  A +
Sbjct: 191 TPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRTNLLGDEKRGFSQFLNTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +  +A+ +A+ R   G  +     ++  +AD+A++I  A  L  + A   D+ 
Sbjct: 251 SVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKLADMAMEIELARTLVHKAAWLKDQK 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +EAA A       K +  +M      +A++  GGSGY++E  + RH R+     I 
Sbjct: 311 KPFGKEAAMA-------KLFASEMGFRTCNQAIQIHGGSGYMKEYDVERHLRDIKLMEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +  L+
Sbjct: 364 EGTSEIQRLVISRLI 378


>gi|157375429|ref|YP_001474029.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317803|gb|ABV36901.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 585

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/472 (19%), Positives = 177/472 (37%), Gaps = 53/472 (11%)

Query: 34  MNAYSSDSL----LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       ++  + + P+     L  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYQAPLAEMKFMLDKVFDAPNTW-ASLPAIAENVDMDTAVAIMDEADKISRELIHPIN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G         DKV     + A+  +    G      D     +   +   +    +  
Sbjct: 60  RSGDEQGVRHEDDKVITPDGFKAVYDQYAEGGWVGLCGDPELGGMGMPKMLGVLVDEMSY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             A  + +
Sbjct: 120 SACNSFTLYGSLTAGAALCINAHGSDELKEKYLPMLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--RVGC 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTKAVPNDDGSYNITGSKIFITGGDHDLTENVIHLVLAKLPDSNGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  D     G  NG+    +++K+G +++AT  + + +  G+L+G  N     + 
Sbjct: 227 FLVPKIKVDDSGNLGESNGVTVGSIEHKMGLKASATCVMNYDDAQGYLIGRPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         ++    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATCDPILVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +I     A  ALS       D     E + +++ A Y  ++ P+ K +           
Sbjct: 347 LNIRTLTEAGRALSILTGKQLDIAKYGEGEDKAKAARYVGLLTPVAKAFLSDRGLDAAIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL  
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAA 458


>gi|120610521|ref|YP_970199.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120588985|gb|ABM32425.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 571

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 139/552 (25%), Positives = 231/552 (41%), Gaps = 32/552 (5%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTA 70
           M Q  + +DS       P   G N + +D+ L +L+A   P  ++  +    E +     
Sbjct: 1   MPQPFRAADSH----PVPDGHGRNLFDTDTELQSLLALYLPDALYTHMRPHFERLGGLAG 56

Query: 71  QELAR---MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEP 126
             L      A+ N P L      G    ++  HPA+  + R ++ + GL           
Sbjct: 57  GLLDDLAGTADRNPPVLEHRTRTGLDVQRIVKHPAYVEMERLALSEFGLGAMSHREETLG 116

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
                   ++    YL  Q E G     S+T +    L    +P +   + P + S ++D
Sbjct: 117 WQGPMPALVKYVLTYLFVQAEFGLCCPVSMTDSLTRTLRRFGSPELLARYLPALTSLDFD 176

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
              +  M          +TE+  G+DIAA  ++    +DG + L+G KWF S+P +   +
Sbjct: 177 ELAQGAMF---------MTEQGAGSDIAATATRATPAADGSWRLTGDKWFCSNPDAGFAM 227

Query: 245 MLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +LA+++G       V  FL+PR LEDGS N     RLK+K+G RS A+ E+  +     L
Sbjct: 228 VLARIDGAPEGLKGVSLFLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLAGAVAHL 287

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       + DM     L + + +   MR +++EA   A  R   G  L D P+M+R 
Sbjct: 288 VGEEGRGFVQMADMVNNSRLSNGVRAAGLMRRAVSEAEFVASERRAFGRALQDMPLMRRQ 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAME 417
           +  + +    A  + F+ A +   + +  ++A A  RI+ P+ K+  C+ A  V  +AME
Sbjct: 348 LDKLRVPAEQARTMVFQTARALARSDAGEKDAYALLRILTPLIKFRACRDARKVTGDAME 407

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GYIEE S AR  R++   SI  G+ N + LDVL  + +  +L   + S     L 
Sbjct: 408 VRGGCGYIEEFSDARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSLP--VLSAHNAALL 465

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEK---IALASSAAALYRAGMNDIADVFLENRF 534
                            +    LA    +      LA  AA+      + IA  +   + 
Sbjct: 466 EDAALPPAFAAALAHSFERACALAETALQDDGGEVLARQAASALYHCTSAIAMAWEAAKT 525

Query: 535 LDNCHSTHCMLH 546
                     + 
Sbjct: 526 GSAARMHWARMA 537


>gi|30268183|emb|CAD38535.2| hypothetical protein [Homo sapiens]
          Length = 427

 Score =  288 bits (738), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 80  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 139

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 140 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 185

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 186 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 245

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 246 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 302

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 303 CFDYTIPYVKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 362

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 363 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 415

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 416 LNTIAKHID 424


>gi|85712837|ref|ZP_01043879.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
 gi|85693301|gb|EAQ31257.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
          Length = 593

 Score =  288 bits (738), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 95/575 (16%), Positives = 189/575 (32%), Gaps = 67/575 (11%)

Query: 38  SSDSLLVALIANFPSVVHKEL--ELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERW 94
             D +L  +          ++  E++ +   S    E A++A     P        G  +
Sbjct: 10  DMDFVLHDVFNVTADWQKSDMLAEMMDQDTASAILDEAAKVAEQLIAPVSRQADEEGVSF 69

Query: 95  D--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +  +V    A+    R+    G      +  F  +   ++   +   +   A +      
Sbjct: 70  NGGEVTTPAAYKENFRQLAEGGWVGVTANPDFGGMGLPKSLSAQYEEMLCSADVAFSLYP 129

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +  +   + L  +  + + +  K+   E+  T             + LTE   GTD+ 
Sbjct: 130 GLTSGAIMTLDLHGSDDIKQTYLEKMVQGEWTGT-------------MCLTEPHAGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            I ++ +   D  Y +SG K F++    D       ++LA++         +  F+VP+ 
Sbjct: 177 IIKTKAEPQGDDSYLISGTKIFITGGEHDLVDNIVHLVLAKLPDAPAGTKGISLFVVPKF 236

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L +     G  N +    +++K+G   +AT  + F    G+++G+ N     +  M    
Sbjct: 237 LVNDDGSVGERNAVSCGSIEHKMGIHGSATCVMNFDGARGWMVGEPNRGLAAMFTMMNYE 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   I  +     S   A+ YAR R    G             L+    ++R +  +  
Sbjct: 297 RLGVGIQGLGTAERSYQNALEYARERIQGRGAKATRDMSAAADPLLVHGDIRRMLLTMKS 356

Query: 365 DIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
                 A S  +    D AK       + +  A   ++ P+ K +             + 
Sbjct: 357 LTEGGRAFSTWVGQQLDRAKYGESDEVKQQADAMVALLTPVAKAFLTDTGLESTIHGQQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDL 476
            GG GY+ E    +  R++    I  G+     LD+L     G    L     + ++  +
Sbjct: 417 FGGHGYVREWGQEQLIRDTRIAQIYEGTNGIQALDLLGRKVVGSKGQLLHPFVAEIKAFV 476

Query: 477 GSSGKKVI-TILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLE 531
             +                 E + +   + E+        +S A  Y   +  IA  +L 
Sbjct: 477 NEAATDNWNAQFNQLKQAVDELERVTGQIIERTQSDENQVNSVAVEYLHLVGYIAYAYLW 536

Query: 532 NRFLDNCHSTHCMLH--------GRFNAAHIIDSL 558
            R      +               RF  A I+  +
Sbjct: 537 LRMALVAETKQGERPYLASKIKTARFYFARILPRI 571


>gi|313888695|ref|ZP_07822359.1| butyryl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845253|gb|EFR32650.1| butyryl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 380

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 121/374 (32%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  E  P     +++    G     + + +        A+ +    L       
Sbjct: 26  PVAADVDATEEVPM--ENVKKMARYGFFGIPFPKEYGGQGADYLAYAMAVEELSKKCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +    + +    T    K + P + +                    GLTE   
Sbjct: 84  GVIVSAHTSLCCAPIYENGTEEQKKKYLPDLLAG-------------KKFGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD +   +      D         +  ++  +D FI++A  +   G   +   + +   
Sbjct: 131 GTDASGQRTTAVLDGDEYVLNGSKIFITNAGFADVFIVIAMTDRSKGNHGISAFIVERGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G      ++K+G R ++T EL F +        L     G    MK L    +  A  +
Sbjct: 191 PGFTVGEPEDKMGIRGSSTCELIFEDCRIPRENLLGREGKGFAIAMKTLDGGRIGIASQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     ++ E + Y   R   G  +      +  +AD+     AA  L +R A++     
Sbjct: 251 LGIAEGAIDETVKYTTERKQFGRRISQFQNTQFELADMKTTAEAAQLLVYRAADAKQAGL 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                       A + K +    A  +    ++  GG GY  +  I R  R++    I  
Sbjct: 311 PYG-------HFAAMAKLFAANAASDITRRCLQLFGGYGYTRDYPIERMMRDAKITEIYE 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V + +
Sbjct: 364 GTSEVMKMVVSSWM 377


>gi|308452033|ref|XP_003088892.1| CRE-IVD-1 protein [Caenorhabditis remanei]
 gi|308244474|gb|EFO88426.1| CRE-IVD-1 protein [Caenorhabditis remanei]
          Length = 418

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 134/373 (35%), Gaps = 27/373 (7%)

Query: 95  DKVEFHPAWHAL---LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           DK++    W  L    ++    GL        +        +H I    L   A   A  
Sbjct: 62  DKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSAMNYFSHVIAMEELSRAAGGIALS 121

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S    + +    +    K + PK+ S E+                L ++E + G+D
Sbjct: 122 YGAHSNLCVNQICRNGSEEQKKKYLPKLISGEHMG-------------ALAMSEAQAGSD 168

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + ++  + +K  D         W  + P +D  ++ A+ +       +   L + +  G 
Sbjct: 169 VVSMKLRAEKKGDKYILNGTKFWITNGPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGF 228

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R + T EL F N        +G +      +        L  +   +  
Sbjct: 229 SQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGVGKGVYVLMTGLDYERLVLSGGPLGL 288

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R   G  +    +++  +AD+   + A+ +  + +A + D+    +
Sbjct: 289 MQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGTVSN 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++             +  +    V  +A++ +GG+GYI +    R  R++    I  G+ 
Sbjct: 349 KD-------CAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTS 401

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 402 EVRRLIIGRALNK 414


>gi|157961902|ref|YP_001501936.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846902|gb|ABV87401.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 586

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/515 (18%), Positives = 190/515 (36%), Gaps = 56/515 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y++       L+  + + P     E+  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYNAPLAEMRFLLEKVFDAPKTWS-EMPAMAETVDMDTAAAILDEADKISRELIHPIN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G         DKV     + A+  +    G      D  F  +   +   +    +  
Sbjct: 60  RSGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--EGRVGC 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +     G  NG+    +++K+G + +AT  + F +  G+L+G  N     + 
Sbjct: 227 FLVPKIKVNADNSLGDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         ++    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGANCDPILVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             I     A  ALS       D AK       +++ + +  ++ P++K +          
Sbjct: 347 LTIRTLTEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDRGLDAAI 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFST 471
            A +  GG GYI E  I +  R++    I  G+     +D L     G N     +  + 
Sbjct: 407 MAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITE 466

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              ++              + L ++   +A+ + E
Sbjct: 467 QVANINGYQHVSDADKTRILGLLEQLLVVAKQVNE 501


>gi|262278695|ref|ZP_06056480.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259046|gb|EEY77779.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 384

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAVKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGIEGIGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQIIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|256420334|ref|YP_003120987.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256035242|gb|ACU58786.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 379

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 140/372 (37%), Gaps = 26/372 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L ++    GL   +    +         +    + +  +       +
Sbjct: 30  EWDENQSFPV--QLFKQLGELGLMGVLVPEKYGGSGLGYLEYVTVISEIAKICGAIGLSV 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +    +    + + PK+ S E+                 GLTE   G+D 
Sbjct: 88  AAHNSLCTGHILQFGSEEQKQRYLPKLASAEW-------------IGAWGLTEPNTGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +    ++  D         W       D  +++A+         +   + +    G  
Sbjct: 135 MNMKCVARREGDEWVLNGTKCWITHGKSGDVAVVIARTGDVRDSHGMSAFVVERGTPGFS 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGM 328
             + +NK+G R++ T E+ F N    +   L N   G ++ MK+L    +  A +S+   
Sbjct: 195 GGKKENKLGMRASETAEMIFDNCRIPVANMLGNEGDGFIQSMKVLDGGRISIAALSLGIA 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +   A+ YA+ RH     +     +   +AD+A +I AA  L+ + A    + K+R  
Sbjct: 255 KGAYEAALKYAQERHQFDKPIASFQGISFKLADMATEIMAAELLTMQAA----DGKTR-- 308

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A     A + KY+  ++A     EA++  GG GY ++  + + YR++   +I  G+  
Sbjct: 309 -GAKVTQHAAMAKYYASEVAVKAANEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGEGTSE 367

Query: 449 AMVLDVLNLLEK 460
              L +     K
Sbjct: 368 IQKLVIAREALK 379


>gi|85712005|ref|ZP_01043059.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
 gi|85694191|gb|EAQ32135.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145]
          Length = 385

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 134/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    P    + R++   G                +                 
Sbjct: 26  PNAARWDEEAHFPI--EVFRKAGEMGFMGMYTPEEAGGFGMSRLDSALIFEQLAGGCTAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M+       M+       V  +W P++ + E                   LTE   G
Sbjct: 84  TAMMTIHNMVTWMIGSFGQQDVIDEWVPELVTGE-------------KLGSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S   S D  +++A+  G  G   +   +     
Sbjct: 131 SDAASLRTSAKKEGDE-YVLNGSKMFISGAGSTDVMVVMART-GEAGPKGISAFVVPADA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+ Y + ++K+G  +  T  + F +       LLGD                ++ A+ S
Sbjct: 189 KGISYGKKEDKMGWNAQPTRLVTFEDVRIPAKNLLGDEGEGFKFAMMGLDGGRINIAVCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +    A+  D   
Sbjct: 249 VGTAQAALETASAYMHERSQFGKPLAAFQALQFKLADMATELVAARQMVRLAASKVDNND 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                         + K +   +   V  EA++  GG GYI+E  + RH R+   + IL 
Sbjct: 309 PDK------TTYCAMAKRFATDIGFQVCNEALQIHGGYGYIKEYPLERHVRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L +   +
Sbjct: 363 GTNEVMRLIIARRI 376


>gi|312889445|ref|ZP_07748997.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297997|gb|EFQ75114.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 379

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 132/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+ +  PA    +++    G    + D  +        ++ +    L  +    +  +  
Sbjct: 32  DEHQKFPA--EQVKKLGELGFLGMMVDAKYGGSGMDTISYVLVMEELSKIDASASVVVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T    + +               P+ K        L+E   G+D  +
Sbjct: 90  NNSLVCYGLEKYGTEEQKQKYL-------------VPLAKGEKIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +    + D         W  +   +  ++++AQ     G   +  L+ +    G    
Sbjct: 137 QHTTAIDMGDYYLLNGTKNWITNGGSASTYLVIAQTHAERGHHGINVLIVERGMEGFTVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             +NK+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRGSDTHSLMFTDVKVPKENRIGEDGFGFKFAMKTLEGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  L D   ++  +AD+A +I AA  L  + A   D  +S +  +
Sbjct: 257 AYELALQYSKERKTFGKPLADHQSIQFKLADMATEIEAARLLCLKAAWLKDSGQSYALAS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +  ++A     EA++  GG G+++E  + R  R++    I  G+    
Sbjct: 317 SMA-------KLFASEVAMKTTIEAVQIHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            + +   + K
Sbjct: 370 KIVISREILK 379


>gi|153953270|ref|YP_001394035.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri
           DSM 555]
 gi|219853903|ref|YP_002471025.1| hypothetical protein CKR_0560 [Clostridium kluyveri NBRC 12016]
 gi|146346151|gb|EDK32687.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri
           DSM 555]
 gi|219567627|dbj|BAH05611.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 562

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 32/352 (9%)

Query: 115 LHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           +    + + +    +   ++ I    L  +       L + +      +    T    + 
Sbjct: 50  IMGLPYPKEYGGAGKDVLSYAIAVEELSRVDAGVGVILSAHTSLGTWPIMEFGTKEQKEK 109

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +   + S                    GLTE   G+D     +      D  Y ++G K 
Sbjct: 110 YLVPLASG-------------KKIAAFGLTEPNAGSDAGKTETTAVLEGDH-YVINGSKV 155

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++   +D +++ A     +G   +   + +   +G  +    NK+G RS+AT EL F 
Sbjct: 156 FITNADYADTYVIFAVTTPGLGTKGISAFIIEKGMDGFTFGTHYNKMGIRSSATAELLFK 215

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           N         N+     E  KI +  L+   + ++   + +A+     A+ Y++ R   G
Sbjct: 216 NLKVP---KYNLLGKENEGFKIAMQTLEGGRIGIAAQALGIAQGAYEKALSYSKERVQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +  Q  +   +AD+A  I AA  + +  A    E K+   E+A A       K +   
Sbjct: 273 KPISRQQSIAFKLADMATKIRAARFMVYSAAVLKQEHKNYGMESAMA-------KLYASD 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +   V+ +A++  GGSG+I+   + R YR++   +I  G+     L + N +
Sbjct: 326 ICLEVVNDAVQIYGGSGFIKGFPVERMYRDAKICTIYEGTNEIQRLIISNDI 377


>gi|300778163|ref|ZP_07088021.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503673|gb|EFK34813.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 430

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 138/373 (36%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L  +    G    +    +         +      +  +       +
Sbjct: 81  EWDESQTFP--KDLFHQLGEMGFMGIVVPEQYGGSGLGYHEYVAILDEISQVDPSIGLSV 138

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +           W P++ S               V    GLTE   G+D 
Sbjct: 139 AAHNSLCTNHIYEFGNEEQRHKWLPQLASG-------------KVIGAWGLTEHNTGSDS 185

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGL 270
             +++   +  D  + ++G K F++  +S    ++    G  G        + +    G 
Sbjct: 186 GGMSTTAVRDGDE-WIINGAKNFITHAISGDIAVVMTRTGEKGAKNNSTAFVLEKGMPGF 244

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T EL F N        L  V  G  + MK+L    +  A +S+  
Sbjct: 245 TSGKKENKLGMRASETAELIFDNVRVPDSHRLGEVGEGFKQAMKVLDGGRISIAALSLGT 304

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A+ YA+ RH  G  + D   +   +AD+A +I AA  L  R +   +  +  +
Sbjct: 305 ARGAYKAALKYAKERHQFGKPIADFQAINFMLADMATEIDAAELLIQRASTLKNAKQKMT 364

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E A A       K +  +    +   A++  GG GY ++    + YR+S   +I  G+ 
Sbjct: 365 KEGAMA-------KLYASEACVRISNNAVQIFGGYGYTKDFPAEKFYRDSKLCTIGEGTS 417

Query: 448 NAMVLDVLNLLEK 460
               L +   + K
Sbjct: 418 EIQRLVIGRDITK 430


>gi|328771168|gb|EGF81208.1| hypothetical protein BATDEDRAFT_19249 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 418

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 148/413 (35%), Gaps = 40/413 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + + +EL  L E V     +ELA +A                 DK    P    + R+  
Sbjct: 39  AGLSEELSELRESVHEFAQRELAPLAEQ--------------IDKSNNFPM--DMWRKLG 82

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +        AH +    L   +   A    + S    + +        
Sbjct: 83  DMGLLGITAPEEYGGQGMGYLAHTVAMEELSRASGSVALSYGAHSNLCVNQIVRNGNKAQ 142

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+ S E+                L ++E   G+D+ ++  + +K  D       
Sbjct: 143 KEKYLPKLISGEH-------------VGALAMSEAGSGSDVVSMKLRAEKKGDRYILNGT 189

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  + P ++  ++ A+ +   G   +   L +    G       +K+G R + T EL 
Sbjct: 190 KFWITNGPDANVLVVYAKTDINSGPKGITAFLIEKGFKGFTTSPKLDKLGMRGSNTCELV 249

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGG 347
           F N        L      V  +   + L+  ++S   +  M+ +L   + Y   R   G 
Sbjct: 250 FDNCEVPAENVLGEVGKGVYVLMSGLDLERLVLSGGPLGLMQAALDVTVPYVHDRTQFGQ 309

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +  +++  +AD+   ++A+ +  + +  + D     S++ A A         +  + 
Sbjct: 310 KIGEFQLLQAKLADMYTKLSASRSYVYAVGRACDLGHYSSKDCAGA-------ILYSAER 362

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A     +A++C+GG+G+I +    R  R++    I  G+     + +     K
Sbjct: 363 ATECALDAIQCLGGNGFINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREFNK 415


>gi|239930857|ref|ZP_04687810.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439228|ref|ZP_06578618.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342123|gb|EFE69079.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 138/390 (35%), Gaps = 20/390 (5%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ++ R A  +  +     P     D+    P     L   +   LH       +       
Sbjct: 17  DMLRDAVRSLAE-AKIAPYAAAVDEEARFP--QEALDALVGADLHAVHVPEEYGGAGADA 73

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              +        A   +  + + +   +  V L  +  + K +              AP+
Sbjct: 74  LATVIVIEEVARACASSSLIPAVNKLGSLPVLLSGSEELKKKYM-------------APL 120

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D A + ++  +  D        +W  ++ +S+ + ++A  + 
Sbjct: 121 AKGDAMFSYCLSEPDAGSDAAGMKTRAVRDGDAYVLNGVKRWITNAGVSEYYTVMAVTDP 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   + + S  G+ +   + K+G + + T E+   N        +    TG   
Sbjct: 181 TKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFAT 240

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++   + +L  A  Y R R   G  + D   ++  +AD+A+ I A
Sbjct: 241 AMKTLDHTRITIAAQALGIAQGALDYAKGYVRERKQFGKPIADFQGVQFMLADMAMKIEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   +   +   E       A   K +   +A  V  +A++ +GG GY  + 
Sbjct: 301 ARQLTYAAAAKSERVAAGGGEGDLTFQGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDY 359

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + +   L
Sbjct: 360 PVERMMRDAKITQIYEGTNQVQRIVMARNL 389


>gi|118443327|ref|YP_878397.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium novyi NT]
 gi|118133783|gb|ABK60827.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium novyi NT]
          Length = 379

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 126/377 (33%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P    + ++    G+    + + +          I A      A    
Sbjct: 26  PIAAETDATGEFPM--EVYKKLGKYGIIGLPYPKEYGGTGGDYLSYILAVEEISKACGSL 83

Query: 149 -GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    T    K + P + S                    GLTE   
Sbjct: 84  GISYSVNTSLCCGAIYQNGTEEQKKKYLPDLCSG-------------KKLGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +   K  D  Y L+G K F+++ P+++ F++ A  +   G   +   + +  
Sbjct: 131 GTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDKSKGTKGISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+   ++++K+G R     E+   +        L     G    MK L    +  A  
Sbjct: 190 FPGISIGKVEDKMGIRGAQVGEIILEDCVVPAENLLGKEGKGFAIAMKTLDGGRIGVAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +   A  Y + R   G  L     +   +AD+ + I  +  L +  A   +  
Sbjct: 250 GLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSRYLLYTAAMDKNNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S  AA A       K  C   A  V  EA++  GG GYI++  + R  R++    I 
Sbjct: 310 NPYSVSAARA-------KLSCTDTAMYVTTEAVQLFGGYGYIKDYPVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEVQRMVISGSIFR 379


>gi|237785216|ref|YP_002905921.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758128|gb|ACR17378.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 389

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 123/379 (32%), Gaps = 21/379 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +  P     D+ E  P     L   +  G +       +                    
Sbjct: 29  KSIAPHAADVDENERFP--QEALDALVETGFNAVHIPEEYGGAGGDSVMACIVIEEVARV 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +      + L  +  + +   P I                       L+E
Sbjct: 87  CGSSSLIPAVNKLGTMGLILKGSEELKQQVLPDI--------------AGGKMASYALSE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D  ++ ++ +K  D         W  +   S  + ++A  +   G   +   +  
Sbjct: 133 RGAGSDAGSMKTRARKDGDSWVLNGSKCWITNGGKSTWYTVMAVTDPDKGANGISAFMVH 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G      + K+G + + T EL F +       ++GD         +          
Sbjct: 193 ADDEGFVVGPKEKKLGIKGSPTAELYFEDCRIPADRIIGDEGTGFKTALETLDHTRPTIG 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +  + + Y + R   G  + D    +  +AD+ + I AA  + +  A++ +
Sbjct: 253 AQALGIAQGAFDQTVKYVKEREQFGRRIADFQNTQFMLADMKMKIDAARLMVYTAASNAE 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   E     ++A  +K +   +A  V  +A++  GG GY  +  + R  R++    
Sbjct: 313 RGHAEGGE--RLGMLAAGSKAFASDVAMQVTTDAVQLFGGYGYTRDFPVERMMRDAKITQ 370

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   + K
Sbjct: 371 IYEGTNQICRMVMGRQILK 389


>gi|116751348|ref|YP_848035.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116700412|gb|ABK19600.1| butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 400

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 146/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  E  D     P     ++R          +   +         + I    L       
Sbjct: 47  PIAEEVDMEPRFPM--ENIKRLAEQDWCGIPYPTQYGGAGADYLTYTIVVEELSRACAAT 104

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +  ++  +    T    + W               P+ K  +     LTE   
Sbjct: 105 GFTLECQTSLASFPLFKFGTEEQKQKWL-------------TPLCKGQILGSFALTEPGA 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD+AA ++      D  Y L+G K F+S+ P++  FI+ A  +   G   +   +    
Sbjct: 152 GTDVAAGSTTAVLDGD-SYVLNGTKMFISNAPVAGVFIIFASTDKSKGPKGLSAFIVPAD 210

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
            +G+      NK+G R   T E+   N         N+  G  +  KI ++ LD   + +
Sbjct: 211 TSGIKPGEHLNKMGIRGALTSEVVLKNCRIPKG---NLLGGEGQGFKIAMMTLDGGRIGI 267

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A+A     IHY++ R   G  +     ++  +AD+A ++ A+  L++  A  +
Sbjct: 268 AAQALGIAQAALDESIHYSKERVQFGKPISSFQAIQWMLADMATEVEASRFLTYHAAWCY 327

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    S+EAA A++ A        + A      A++  GG G+I+   + R YR++   
Sbjct: 328 DQGLPYSKEAAMAKLHAA-------ETAARQTNRAIQIHGGIGFIKGHKVERLYRDAKIT 380

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+   M + +   + +
Sbjct: 381 EIYEGTSEVMRMVISGSILR 400


>gi|294784037|ref|ZP_06749359.1| acyl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
 gi|294479849|gb|EFG27628.1| acyl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA]
          Length = 378

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S  +   V +  +    +    
Sbjct: 52  ALEVPEEFGGPGLSRVDVAALIEEMAIADAGFATTISASGLAMKPVLIAGSHDQKQKMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +                       LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LVLEGG--------------LGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  M+  + + A  +   G   +     +    GL   + ++K+G R++ T ++   +  
Sbjct: 157 NGEMASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGKHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G    MK L       A ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 VPASALLGKEGEGFTIAMKTLDQARSWIACIAVGIAQRGIQEAITYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + + N
Sbjct: 330 SEAIQIFGGYGYSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|153833122|ref|ZP_01985789.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01]
 gi|148870552|gb|EDL69460.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01]
          Length = 384

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 137/384 (35%), Gaps = 25/384 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LR +   G            +   +           M 
Sbjct: 22  ERLAPMAAEWDEKQIFP--KDILREAGELGFLSLYTPEEQGGLGLSRLDASIIFEQLSMG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M+       MVA   +  V   + PK+ + ++                  LTE
Sbjct: 80  CTSTTAFMTIHNMVTWMVASFASEEVKDAFCPKLITGDF-------------LGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++T+   K  D      G  +   +  +D  +++A+  G  G   V   +  
Sbjct: 127 PNAGSDAASLTTSATKQGDNYILNGGKTFISGAGDTDVLVVMART-GDAGAKGVSAFVVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G+ Y R + K+G  S  T  + F N        L     G V  MK L    ++ A
Sbjct: 186 ADAEGISYGRKEPKMGWNSQPTRAVTFDNVSIPASHLLGEEGQGFVFAMKGLDGGRINIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             SV   + +L +A  Y + R   G  L     ++  +AD+A ++ AA  L    A+  D
Sbjct: 246 TCSVGTAQQALNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A     + K +   +   V  +A++  GG GYI+E  + R++R+   + 
Sbjct: 306 RGDPD------ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLF 465
           IL G+   M L +   L    +  
Sbjct: 360 ILEGTNEIMRLIIARRLLAEESAL 383


>gi|54302789|ref|YP_132782.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
 gi|46916213|emb|CAG22982.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
          Length = 396

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/419 (21%), Positives = 152/419 (36%), Gaps = 40/419 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A      L    P    WD+    P    +L+ +   G        
Sbjct: 2   DFELNEDQRAFAETARQFA--LERLSPMAAEWDEKHIFP--KGVLKEAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+       M+A   T     ++ P++   +
Sbjct: 58  EQGGLALSRLDSSIIFEQLAMGCTSTTAFMTIHNMVTWMIASFATDEAKAEYCPQLIIGD 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
           +                  LTE   G+D AA+T+  +KI D  Y L+G K F+S    +D
Sbjct: 118 W-------------LGSYCLTEPNAGSDAAALTTSAKKIKD-QYILNGAKTFISGAGETD 163

Query: 242 AFIMLAQV-----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +++A+            E + G   +   +      G+ Y R + K+G  S  T  + 
Sbjct: 164 VLVVMARTVNDEQGRNKKAEHKSGAKGISAFIVPADATGITYGRKEPKMGWNSQPTRSIT 223

Query: 291 FSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N        L     G    MK L    ++ A  SV   + +L +A  Y   R   G 
Sbjct: 224 FDNVAIPARNLLGQEGEGFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGK 283

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L     ++  +AD+A ++ AA  L    A+  D           A     + K +    
Sbjct: 284 SLAQFQGLQFKLADMATELVAARQLVRYAASKLDRQDPE------ATAYCAMAKRFATDT 337

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
              V  +A++  GG GYI+E  + R++R+   + IL G+   M L +   LL +GT + 
Sbjct: 338 GFTVCDQALQLYGGYGYIKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396


>gi|225012640|ref|ZP_03703075.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
 gi|225003173|gb|EEG41148.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
          Length = 387

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 147/371 (39%), Gaps = 28/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HL 151
            WD+ ++ P    +  ++   G    +   ++          +       +     G  +
Sbjct: 37  DWDEAQYFP--KDIFEKAGALGFMGMLIPEAYGGSGMGYHEYVTLIETISIVDPSIGLSI 94

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +    T      W P + S                    GLTE   G+D 
Sbjct: 95  AAHNSLCTNHIYTFGTEDQRNRWLPDLCSGV-------------SIGAWGLTEHNTGSDA 141

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGL 270
             +++  +K  D  + L+G K F++  +S A  ++    G  G    +   + +    G 
Sbjct: 142 KGMSTTAKKDGDN-WILNGTKNFITHGISGAIAVVIARSGEKGDNRGMTAFVVERGTPGF 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T E+ F N        L  +  G ++ MKIL    +  A +S+  
Sbjct: 201 TSGKKENKLGMRASETAEMVFDNCIIPDQNRLGPIGDGFIQSMKILDGGRISIAALSLGV 260

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   ++ Y++ R   G  +     +   IAD+A +I AA  L+ + +   ++ K+ +
Sbjct: 261 AKGAFNASLKYSKERKQFGRPISSFQGISFKIADMATEIEAAVLLTEKASELKNQGKNVT 320

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ A A       K +  ++   V  EA++  GG G+ ++  + + +R+S   +I  G+ 
Sbjct: 321 QQGAMA-------KLFASEVCVKVANEAVQIHGGYGFTKDFPVEKFFRDSKLCTIGEGTS 373

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 374 EIQKLVISRKL 384


>gi|134298279|ref|YP_001111775.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           reducens MI-1]
 gi|134050979|gb|ABO48950.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 380

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 135/377 (35%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D     P     L++    GL        +                Y+   +  
Sbjct: 26  PIAAQTDSTHQFPL--ETLKKLADMGLMGLPIPEEYGGAGSD----------YVTFAILV 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +     ++A ++++ T       +     + E       P+ +  +     LTE + G
Sbjct: 74  EEIAKVCASTAVILSVHTGLGCMSTYM--FGNEEQKERYLKPLCEGKMLGAFALTEPQAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           +D AA+     +  D  Y L+G K F+++   +D ++   + +        V  L+ D  
Sbjct: 132 SDAAALKCTAVRKGD-KYILNGSKIFITNGGYADMYVTFVRTDPSTKNYNGVTCLIVDKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIM 323
             GL   + + K+G   +ATV L F +    +     +          +     +     
Sbjct: 191 TPGLVIGKPEEKMGLNGSATVTLTFEDAEVPVENRLLEEGKGFNVAMGLLNGGRITIGAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +   + +L   I Y + R   G  L  Q  ++  +AD+A +I A+  L +R A      
Sbjct: 251 GLGIAQGALDLTIPYVKGREQFGKPLSAQQGIQFMLADMATEIDASRLLIYRAAWLKSNG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EA+ A+        +    A  V  + ++  GG GY +E  I R+ R++    I 
Sbjct: 311 LEHAMEASMAKR-------FATDTAMRVTTDCVQLFGGYGYCKEYQIERYMRDAKITQIY 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L K
Sbjct: 364 EGANQIQRLVIAKQLLK 380


>gi|116626102|ref|YP_828258.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229264|gb|ABJ87973.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 381

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 151/377 (40%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD+ +  P    ++R+    G   SI+             + I    L  +    
Sbjct: 26  PHVMEWDEAQTFPL--DVIRKLGRLGYMGSIFPEELGGAGLGYIEYSIIIEELSRVDGSV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   ++ +  M +    + + PK+ S E+                  LTE   
Sbjct: 84  GIILAAHTSLCSNHIFKMGSDEQRRRYLPKLASGEW-------------IGCWSLTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A   +  +    G + L+G K F ++   +D  + +A  +       +   L +  
Sbjct: 131 GSDAAGTRTHAETDESGGWVLNGSKTFTTNAHYADVCVAMAVTDRAAAQHGISAFLIEKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKIL--IYLDSAIM 323
             G    + +NK+G R++AT E+ F N        L     G V  +K+L    +  A +
Sbjct: 191 TPGYRCGKKENKLGLRASATGEVIFENCRLGPTQLLGKLNDGFVASLKVLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +   A+ Y++ R   G  + +   ++  + D+A+D+ AA  L++R A   D  
Sbjct: 251 SIGMAQGAYDAALRYSKLRKQFGRPISEFQAIQHKLVDMAVDLDAARLLNYRAAWMLDRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + E++ A       K +  + A  +  EA++  GG G+I++  + + YR+    +I 
Sbjct: 311 MRVTRESSMA-------KLFASEAAVRIAGEAVQIHGGYGFIKDYPVEKFYRDVKLCTIG 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L K
Sbjct: 364 EGTSEIQRLVIARQLLK 380


>gi|169630697|ref|YP_001704346.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169242664|emb|CAM63692.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 387

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 61/396 (15%), Positives = 131/396 (33%), Gaps = 26/396 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L     EL R A     +     P  +  D+    P     L   +  G +       ++
Sbjct: 12  LGEEHDEL-RAAIRGLAE-KEIAPHAKDVDEKARFP--QEALDALVASGFNAVHVPEEYD 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                                 +  + + +      + L  +  + K   P I S E   
Sbjct: 68  GQGADSVAACIVIEEVARVCASSSLIPAVNKLGTMGLILNGSDELKKQVLPAIASGE--- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           L+E+  G+D A++ ++ +   D         W  +   S  + +
Sbjct: 125 ----------AMASYALSEREAGSDAASMRTRAKADGDDWIINGSKCWITNGGKSSWYTV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
           +A  +       +   +      G     L++K+G + + T EL F N       ++G+ 
Sbjct: 175 MAVTDPEKKANGISAFMVHKDDEGFTVGPLEHKLGIKGSPTAELYFENCRIPGDRIIGEP 234

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                                ++   + +L +AI Y + R   G  + D   ++  +AD+
Sbjct: 235 GTGFKTALQTLDHTRPTIGAQALGIAQGALDQAIAYTKDRKQFGKSISDFQGVQFMLADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ + AA  + +  A   +  +           ++  +K +   +A  V  +A++  GG+
Sbjct: 295 AMKVEAARLMVYTAAARAERGEKN------LGFISSASKCFASDVAMEVTTDAVQLFGGA 348

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  +  + R  R++    I  G+     + +   L
Sbjct: 349 GYTTDFPVERMMRDAKITQIYEGTNQIQRVVMSRAL 384


>gi|126697968|ref|YP_001086865.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           630]
 gi|254974039|ref|ZP_05270511.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-66c26]
 gi|255091425|ref|ZP_05320903.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           CIP 107932]
 gi|255099539|ref|ZP_05328516.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-63q42]
 gi|255305396|ref|ZP_05349568.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           ATCC 43255]
 gi|255313085|ref|ZP_05354668.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-76w55]
 gi|255515842|ref|ZP_05383518.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-97b34]
 gi|255648935|ref|ZP_05395837.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-37x79]
 gi|260682146|ref|YP_003213431.1| acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260685744|ref|YP_003216877.1| acyl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519049|ref|ZP_07405396.1| acyl-CoA dehydrogenase family protein [Clostridium difficile
           QCD-32g58]
 gi|115249405|emb|CAJ67220.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium
           difficile]
 gi|260208309|emb|CBA60754.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           CD196]
 gi|260211760|emb|CBE02105.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           R20291]
          Length = 377

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 143/374 (38%), Gaps = 34/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK    P    L+++        S     +        ++ I    +       A  + +
Sbjct: 30  DKTGVMP--KELIKKLADAKFISSNIPEEYGGGGAGYVSYAIVMEEIARRCASTATFVTA 87

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  ++  +    T    + +   I + E             +    GLTE   G+D   
Sbjct: 88  GSSLASLPILYNGTEEQKQKYLKGIATGE-------------LIGAFGLTEPGAGSDAGG 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +  + + D  Y L+G K F+++    D  I++A  +   G       + +   +G   
Sbjct: 135 QQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGTSAFIVESKWDGFST 193

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVS 326
              ++K+G R   T +L F N         N+     +  KI +       +  A +++ 
Sbjct: 194 GAHEDKMGIRGTETSDLIFENVKVP---KENLLGKEGQGFKIAMGTLEVGRIGVAALALG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L EA+ Y ++R   G  +      +  IAD+   + AA  L +  A   D     
Sbjct: 251 IAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARGLVYDAAQKRDAGMRV 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++E+A A       KY+  ++A  V  +A++  GG G+I++  I R YR++   SI  G+
Sbjct: 311 AQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIERMYRDARIVSIYEGT 363

Query: 447 GNAMVLDVLNLLEK 460
                + + + + K
Sbjct: 364 SEVQKMVISSNVLK 377


>gi|110640192|ref|YP_680402.1| bytyryl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282873|gb|ABG61059.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 379

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 132/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS- 153
           D+ +  PA    +++    GL   +   ++          + A           G  MS 
Sbjct: 32  DEQQKFPA--EQIKKLGALGLMGIMTAETYGGAGMDTVSYVLAMEEICKVDASTGVCMSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    +    + +   + S E                   L+E   G+D  +
Sbjct: 90  NNSLVCWGLEHFGSEAQKQKYLKPLASGE-------------RIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +   +  D         W  +   +  ++++AQ    +    +   + +    G    
Sbjct: 137 QRTTAVEQGDHYILNGTKNWITNGNSASVYLVIAQTHPELKHKGINVFIVEKGTPGFVVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRV 330
           + +NK+G R++ T  L F++        +     G    M+      +  A  ++     
Sbjct: 197 KKENKMGIRASDTHSLMFTDVKIPKENRVGDDGFGFKFAMQTLNGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  ++ Y++ R   G  + +   ++  +AD+A  I AA  L  + A   D+ K  +E A
Sbjct: 257 ALELSLAYSKERKSFGTEIFNHQAIQFKLADMATKIDAARLLVLKAAYLKDQHKDYTEAA 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG G+++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLFASQVAMDTTIEAVQIHGGYGFVKEYHVERMMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            L +   L K
Sbjct: 370 KLVIGRELFK 379


>gi|28211702|ref|NP_782646.1| butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204144|gb|AAO36583.1| butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 392

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 141/377 (37%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P     +++     +    +        + +                 
Sbjct: 38  PIAAKIDETGEFP--RESIKKMAKLNMLGIPFPLECGGAGQNELVFSMCIEEIAKHCAST 95

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++       ++    T    + +   +              K +      LTE   G
Sbjct: 96  AAILAVHNIPCWIIEKYGTDYQKEKYLYDLV-------------KGNKIGAFALTEPNAG 142

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD A+  ++  K  D  Y L+G K F+++   +  +I+    +   G   +   + +   
Sbjct: 143 TDSASQNTKAIKQGDN-YILNGQKCFITNGGEAGVYIVFGMTDKSKGTRGITGFIIEKDH 201

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    + +NK+G R+++T EL F N    ++   N+        KI +  LD   ++++
Sbjct: 202 PGFYIGKKENKMGIRASSTSELIFKNC---VIPKENMIGKEGRGFKIAMQALDGGRIAMA 258

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A+      + Y + R   G  L     ++  +AD+   I A+  L  + A  FD
Sbjct: 259 SQAVGIAQGAMDRTVDYLKEREQFGRPLSSFQGLQWMLADMETRINASRLLVQKAAVKFD 318

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++ +++AA A       K +  + A  V  +A++  GG GY+++  + R  R++    
Sbjct: 319 NGENVNKDAAMA-------KLFAAETAMDVTIKAVQLHGGYGYMKDYPLERMMRDAKITE 371

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 372 IYEGTSEVQKMVISKNI 388


>gi|254509704|ref|ZP_05121771.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221533415|gb|EEE36403.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 593

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/541 (18%), Positives = 194/541 (35%), Gaps = 78/541 (14%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIH 112
            ELE           +E  ++A      L+      G R +  + + P  +     +   
Sbjct: 30  DELE---AEFTGAVLEEAGKVATNVLHPLNVVGDTEGCRLENGIVYTPTGFKDAFEQMKE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G         +               ++  +          +  +AS +    +     
Sbjct: 87  GGWTGLDMPEEYGGQNMPYVMGTAVGEMFSGSNQAFTMYQGLTHGAASAILAHGSDAQKN 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P + S E+  T             + LTE   GTD+  + ++ +   DG Y +SG K
Sbjct: 147 RYLPNMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++ G       V  F+VP+ + +     G  NG+   +++
Sbjct: 194 IFISAGDHDMADNIIHLVLAKIPGGPEGIKGVSLFIVPKFIVNEDGSLGERNGVSVGKIE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   N+T  + +    G+LLG+ +     +  M     L   +  +S    +   A+
Sbjct: 254 EKMGIHGNSTCVMNYDEATGWLLGEEHKGMRAMFTMMNEARLGVGMQGLSQAEAAYQNAV 313

Query: 337 HYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            YA+ R   G               LI  P ++R + D       A A     A   D+A
Sbjct: 314 EYAKDRLQ-GRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFTEGARAFILWGATMIDKA 372

Query: 384 KSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               ++ A     ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    
Sbjct: 373 HRSDDKDADGLISLLTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAM 432

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           I  G+     LD++   L + G       F  ++     +G               +++ 
Sbjct: 433 IYEGANGVQALDLVGRKLAQDGGKHVMAFFEMVKSFCKENG--------------GQNEA 478

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
             +   E   L +++  L  AGM      F++    +   + +  L G ++  H+   + 
Sbjct: 479 YDKAFIEP--LKAASKDLQAAGM-----YFMQ----EGMKNPNNALSGSYDFMHMFGHVC 527

Query: 560 L 560
           L
Sbjct: 528 L 528


>gi|269962592|ref|ZP_06176939.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832705|gb|EEZ86817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 384

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 146/406 (35%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     +     P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEEQRMFADTAQQFAAE--RLAPMAAEWDEKQIFP--KDILREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+       MVA      V   + PK+ + E
Sbjct: 58  EQGGLGLSRLDASIIFEQLSMGCTSTTAFMTIHNMVTWMVASFANEEVKDAFCPKLITGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D A++T+   K  +      G  +   +  +D 
Sbjct: 118 F-------------LGSYCLTEPNAGSDAASLTTSATKQGENYILNGGKTFISGAGDTDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N    +   L
Sbjct: 165 LVVMART-GDAGAKGVSAFVVPADADGISYGRKEPKMGWNSQPTRAVTFDNVSIPVSHLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFVFAMKGLDGGRINIATCSVGTAQQALNQAAQYMQERKQFGKSLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D           A     + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRGDPD------ATTYCAMAKRFATDVGFQVCDQALQLY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG GYI+E  + R++R+   + IL G+   M L +   L    +  
Sbjct: 338 GGYGYIKEYPMERYFRDVRVHQILEGTNEIMRLIIARRLLAEESAL 383


>gi|256425244|ref|YP_003125897.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256040152|gb|ACU63696.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 379

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 130/368 (35%), Gaps = 26/368 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+ + +PA    +++    G    + D  +        ++ +    +  +    +  +  
Sbjct: 32  DEKQIYPA--EQIKKLGELGFLGMMVDPKYGGAGLDTVSYVLAMEEISKIDASTSVCMSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T    + +               P+ K  +     L+E   G+D  +
Sbjct: 90  NNSLVCWGLETYGTEEQKQQYL-------------VPLAKGEITGAFLLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             ++ +   D         W  +   +  ++++AQ     G   +  L+ + +  G+   
Sbjct: 137 QRTKAEDKGDHYLVNGTKNWITNGSSASVYLVIAQTHVEKGSKGINALIIEKNSPGVVVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             +NK+G R + T  + F +        +     G    MK L    +  A  ++     
Sbjct: 197 AKENKMGIRGSDTHSIMFQDVKVPKENRIGEDGFGFKFAMKTLAGGRIGIASQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA+ R   G  +     ++  +AD+A  I A+  L  + A   D     +   
Sbjct: 257 AYELAVKYAKERKAFGKEISQHQAIQFKLADMATRIEASRLLCLKAAREKDLHLDYTLSG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +  + A  V  EA++  GG GY++E  + R  R++    I  G+    
Sbjct: 317 SMA-------KVFSSETAMWVTTEAVQVHGGYGYVKEYHVERLMRDAKITQIYEGTSEVQ 369

Query: 451 VLDVLNLL 458
            + +   +
Sbjct: 370 RIVIGRAI 377


>gi|167617946|ref|ZP_02386577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
          Length = 595

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 100/493 (20%), Positives = 182/493 (36%), Gaps = 75/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYVGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ I  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYIDAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGV 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   NAT  +   N  G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D+A S ++E           ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKALSHADEVVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   I+ +   
Sbjct: 431 YVRDARINMIYEGTNSVQALDLLGRKVLG-------------DMGAKLKKFGKIVAEFAE 477

Query: 493 LCKEDKGLARFLT 505
                  ++ F+T
Sbjct: 478 AEGVKPEMSEFIT 490


>gi|255318739|ref|ZP_05359966.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255304237|gb|EET83427.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 384

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 139/378 (36%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P      + +  P    L+++    GL        +  +      ++R A  L   +   
Sbjct: 25  PREHEVAEADKIPE--DLIQKMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGRTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   +S + +  T    + + P+  S E             +     LTE   
Sbjct: 83  RSLIGTNNGIGSSAILIDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPES 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D A++ +   K  D        ++  ++P +  F ++A+    + G   +   L +  
Sbjct: 130 GSDAASLRTTAVKNGDFYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGISAFLVEAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAI 322
              +   ++  K+G + + T ++ F N        +      G    MK+L    L    
Sbjct: 190 NPSITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV      L +A+ YA  R   G  +    +++  +AD   +I AA  +    A   D+
Sbjct: 250 YSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEIYAAKCMVLDAARRRDQ 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++ S E       A  +K +  +M   V    ++  GG+GYI E SI R YR+     +
Sbjct: 310 GENISTE-------ASCSKMFATEMCGRVADRCVQIHGGAGYISEYSIERFYRDVRLFRL 362

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + K
Sbjct: 363 YEGTTQIQQIIIARNMIK 380


>gi|55378707|ref|YP_136557.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55231432|gb|AAV46851.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 379

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 152/373 (40%), Gaps = 23/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G+  D+ + +PA   L+ ++    L        +          +        A    
Sbjct: 26  PLGKECDREKRYPA--ELMEQAAQYDLIAPEVPEKYGGAGMDSLTGVVVTEELWRADPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +      +SM+       + + W PKI S E              A    ++E   G
Sbjct: 84  GSAIGSRGFGSSMIQKYGDEWMKEKWLPKITSGE-------------SACASAISEPAHG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +++A I +  ++ SDG        W  +  ++D  +++A+ +   G   +   L     +
Sbjct: 131 SNVAGIETYAERDSDGWVLNGNKMWITNGTVADVMVVMAKTDPDAGHEGISAFLVPTDTD 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL  +++ NK+G R++   E+   +       L+G+       + D       + A  +V
Sbjct: 191 GLQAEKIDNKLGIRASDLAEIIIDDVRVPEENLIGEAGAGFYQLMDFFASGRANVAAQAV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++ ++I YA  R   G  + +   ++  +A++A ++ AA +L++R A++ D    
Sbjct: 251 GTAQAAIDDSIEYANEREQFGQPISEFQAIEHKVAEMATNVEAARSLTYRAASAIDSGNL 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A  +  + K +  + A  V  EA++  GG+GY+ + ++ R+YR++    I  G
Sbjct: 311 DV-----ATKLTSMAKLFASEHAVDVADEAIQVHGGAGYVTDHNVERYYRDARITKIYEG 365

Query: 446 SGNAMVLDVLNLL 458
           +       + + +
Sbjct: 366 TSEIQKNIIADRV 378


>gi|119479533|ref|XP_001259795.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri
           NRRL 181]
 gi|119407949|gb|EAW17898.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri
           NRRL 181]
          Length = 427

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 139/374 (37%), Gaps = 20/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D     PA   + ++    G      +  +  +    QAH I    L   +   A 
Sbjct: 67  AARTDSQNEFPA--EMWKKLGDAGFLGVTANEEYGGLGMGYQAHCIVMEELSRASGSIAL 124

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  T      + P + S E                 L ++E   G+
Sbjct: 125 SYAAHSQLCVNQLSLNGTEDQKARFLPGLLSGE-------------KVGALAMSEHSAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  + +  G        W  + P +D  ++ A+ E   G   +   + + +  G
Sbjct: 172 DVVSMKTTAKAVDGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGISAFVVEKTFKG 231

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG+LN     + +   L  L  +   + 
Sbjct: 232 FSCARKLDKLGMRGSNTGELVFEDVFVPKENLLGELNKGVRVLMEGLDLERLVLSAGPLG 291

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   ++A+ + ++  A   D + + 
Sbjct: 292 IMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSASRSYTYATARHIDNSAAT 351

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E +           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 352 G-EVSIRTQDCAGAILYSAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 410

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 411 SEIRRMVIGRAFNK 424


>gi|255654422|ref|ZP_05399831.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile
           QCD-23m63]
 gi|296880876|ref|ZP_06904824.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|296428163|gb|EFH14062.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 377

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 144/374 (38%), Gaps = 34/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK    P    L+++        S     +        ++ I    +       A  + +
Sbjct: 30  DKTGVMP--KELIKKLADAKFISSNIPEEYGGGGAGYVSYAIVMEEIARRCASTATFVTA 87

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  ++  +    T    + +   I + E             +    GLTE   G+D A 
Sbjct: 88  GSSLASLPILYNGTEEQKQKYLKGIATGE-------------LIGAFGLTEPGAGSDAAG 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +  + + D  Y L+G K F+++    D  I++A  +   G       + +   +G   
Sbjct: 135 QQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGTSAFIVESKWDGFST 193

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVS 326
              ++K+G R   T +L F N         N+     +  KI +       +  A +++ 
Sbjct: 194 GAHEDKMGIRGTETSDLIFENVKVP---KENLLGKEGQGFKIAMGTLEVGRIGVAALALG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L EA+ Y ++R   G  +      +  IAD+   + AA  L +  A   D     
Sbjct: 251 IAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARGLVYDAAQKRDAGMRV 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++E+A A       KY+  ++A  V  +A++  GG G+I++  I R YR++   SI  G+
Sbjct: 311 AQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIERMYRDARIVSIYEGT 363

Query: 447 GNAMVLDVLNLLEK 460
                + + + + K
Sbjct: 364 SEVQKMVISSNVLK 377


>gi|21221493|ref|NP_627272.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256787320|ref|ZP_05525751.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771215|ref|ZP_06530593.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|6465864|emb|CAB61531.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans]
 gi|14970937|emb|CAC44516.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289701414|gb|EFD68843.1| fatty acid acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 385

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 134/390 (34%), Gaps = 25/390 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ++ R A  +  +     P     D+    P     L     + LH       +       
Sbjct: 17  DMLRDAVRSLAE-AKIAPYAAAVDEEARFP--QEALDALTANDLHAVHVPEEYGGAGADA 73

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              +        A   +  + + +   +  V L  +  + K +               P+
Sbjct: 74  LATVIVIEEVARACASSSLIPAVNKLGSLPVILSGSEELKKKYM-------------TPL 120

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D A + ++  +  D        +W  ++ +S+ + ++A  + 
Sbjct: 121 AKGDGMFSYCLSEPDAGSDAAGMKTRAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDP 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   + + S  G+ +   + K+G + + T E+   N        +    TG   
Sbjct: 181 DKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFAT 240

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I A
Sbjct: 241 AMKTLDHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLADMAMKIEA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A       S               K +   +A  V  +A++ +GG GY  + 
Sbjct: 301 ARQLTYAAAAKSQRGDSD------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDY 354

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + +   L
Sbjct: 355 PVERMMRDAKITQIYEGTNQVQRIVMARNL 384


>gi|167515960|ref|XP_001742321.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778945|gb|EDQ92559.1| predicted protein [Monosiga brevicollis MX1]
          Length = 409

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 136/379 (35%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    PA    +R     GL        +            A          A
Sbjct: 53  PNAAEWDRNHTFPA--DAVRSMYDLGLMGIETPEEYGGAGLDSLAYAIALEEVSRGCASA 110

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS  +    S V    T     ++     S                     L+E   
Sbjct: 111 GVIMSVNNSLYGSPVRKHGTEEQKAEFLTPFCS--------------EKLGCFALSEPGN 156

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  + P SDA ++ A     +    +   + D   
Sbjct: 157 GSDAGAASTTARREGDQWILNGTKAWITNGPESDAVVVFATTNKELKHKGISAFIVDKKT 216

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R++ T  L F +     +   N+        KI +  LD   + ++
Sbjct: 217 PGLSCGKKEDKLGIRASGTCNLIFEDC---AIPAANILGEEGMGFKIAMSTLDGGRIGIA 273

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ Y + R   G  L+    +   +AD+A  + +A  L++R A   D
Sbjct: 274 AQALGIAQAALDCAVAYGQERKSMGVPLVSHQAISMKLADMATRLESARLLTWRAAALKD 333

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K   +EAA  ++ A     +          +A++ +GG GY+ E    RHYR++    
Sbjct: 334 EGKPFIKEAAMGKLAASEAATFVS-------HQAIQILGGMGYVTEMPAERHYRDARITE 386

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 387 IYEGTSEIQRLVIAGQLVK 405


>gi|4501859|ref|NP_001600.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Homo sapiens]
 gi|1168283|sp|P45954|ACDSB_HUMAN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|531391|gb|AAA74424.1| acyl-CoA dehydrogenase [Homo sapiens]
 gi|9739137|gb|AAF97921.1| short/branched chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|55859559|emb|CAI10847.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|119569676|gb|EAW49291.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|189054383|dbj|BAG36909.1| unnamed protein product [Homo sapiens]
 gi|261858534|dbj|BAI45789.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic
           construct]
          Length = 432

 Score =  287 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 308 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 368 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 421 LNTIAKHID 429


>gi|284040475|ref|YP_003390405.1| butyryl-CoA dehydrogenase [Spirosoma linguale DSM 74]
 gi|283819768|gb|ADB41606.1| Butyryl-CoA dehydrogenase [Spirosoma linguale DSM 74]
          Length = 379

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 129/373 (34%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER ++  F       ++R    G    +    +          + A          A  +
Sbjct: 30  ERDNEARFP---VDQVKRMGELGFMGMMVSPDYGGGGMDTVAYVLAMEEISKVDASASVV 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           MS  +      +    T    + +  ++ S E                   L+E   G+D
Sbjct: 87  MSVNNSLVCYGLEAFGTEEQKQKYLTRLASGE-------------TLGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +  +   D         W  +   S   +++AQ +       +  L+ +    G 
Sbjct: 134 ATSQATTAEDKGDYYLVNGTKNWITNGGSSGICLVIAQTDREKKHRGINCLIVEKGTPGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM--KILIYLDSAIMSVSG 327
              + ++K+G R++ T  L F++        +     G    M       +  A  ++  
Sbjct: 194 VVGKKEDKMGIRASDTHSLLFTDVHVPKENRIGEDGFGFKFAMSTLNGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   ++ Y++ R   G  + D   ++  +A++A  I AA  L ++ A   DE K   
Sbjct: 254 AAGAYELSLKYSQERKAFGKQIFDHQAIQFKLAEMATKIEAARLLVYKAARLKDEHKDYV 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           + AA A       K +   +A     EA++  GG GY++E  + R  R++    I  G+ 
Sbjct: 314 QAAAMA-------KLFASDVAMWATTEAVQIHGGYGYVKEFHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               L +   L +
Sbjct: 367 EIQKLVIARELIR 379


>gi|56420027|ref|YP_147345.1| hypothetical protein GK1492 [Geobacillus kaustophilus HTA426]
 gi|56379869|dbj|BAD75777.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 560

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/488 (23%), Positives = 210/488 (43%), Gaps = 32/488 (6%)

Query: 36  AYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            Y  D  L+A +             ++L    E+ L+   +          P+L  Y   
Sbjct: 4   LYEVDPNLLANLKRHLDDELYRYAEEKLASFYEFCLTDVDRRAVHTDREGQPRLIKYDRF 63

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G    +V  +  +    +++   G+   +  +    + RK  +    A+ Y+++Q E G 
Sbjct: 64  GNDISEVWVNEGYVQTAKQTYETGIVGYV-HKPIPELGRKGNYMYSYAQGYILSQAEPGF 122

Query: 151 LMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               +  + +A ++       +   + P + S       +             LTE++GG
Sbjct: 123 YCPVTLTMATAYVLEHFADDELKARYLPHVTSTGEVELYEGATF---------LTERQGG 173

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRL 261
           +D+ A   +     D  Y L G K+F  ++      ++LA+++G       +  FLVP  
Sbjct: 174 SDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSLFLVPWR 232

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +A
Sbjct: 233 KEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAEAYVVGDPRKGFYYMMEALNLSRVCNA 292

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + SV  M+ +L EA  YA RR   G +L D P+++  +A++       T+  F +   FD
Sbjct: 293 VASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETLANLTARQEVETSACFDMIALFD 352

Query: 382 EAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R+
Sbjct: 353 RVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVTPRLLRD 412

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +   ++  G+ N + L+VL L+ K   + E+  + +++ L      V  + R      KE
Sbjct: 413 AQVLTVWEGTANILALEVLRLMRK-YRIHERFAAEMQERLERLAADVKPLARPVEEGLKE 471

Query: 497 D-KGLARF 503
               LAR 
Sbjct: 472 WGAALARL 479


>gi|311745339|ref|ZP_07719124.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577877|gb|EAZ82097.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 379

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 117/291 (40%), Gaps = 11/291 (3%)

Query: 174 WAPKIFSREYDPTNKA-PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           W  + +  E        P+    V     L+E   G+D  +  ++ +   D         
Sbjct: 96  WGLEKYGTEAQKEKYLRPLASGEVLGAFCLSEPEAGSDATSQRTEAKLNGDHYILNGTKN 155

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +   +  ++++AQ    +G   +   + +   +G    + ++K+G R + T  L F+
Sbjct: 156 WITNGNSASIYLVIAQTHPELGHKGISVFIVEREWDGFVVGKKEDKLGIRGSDTHSLMFT 215

Query: 293 NTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +    +   +G+         +      +  A  ++     +   A+ Y++ R   G  +
Sbjct: 216 DVKVPVENRIGEEGFGFTYAMETLNGGRIGIAAQALGIAAGAYELALAYSKEREAFGKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +AD+A  I AA  L ++ A + D+ +  S+ +A       I K +  ++A 
Sbjct: 276 SKHQAIQFKLADMATQIEAARLLVYKAAWTKDQGEDYSQASA-------IAKLYASQVAM 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V  EA++  GG GY++E  + R  R++    I  G+     + +   L +
Sbjct: 329 DVTVEAIQVHGGYGYVKEYHVERLMRDAKITQIYEGTSEIQKIVISRSLLR 379


>gi|302388245|ref|YP_003824067.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
 gi|302198873|gb|ADL06444.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
          Length = 380

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 135/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P    L+ +    G+        +  V         A      A    
Sbjct: 26  PIAAELDREERFPE--ELIPQLGEIGVMGIPIPEEYGGVGMGDLECAMAVEEISKACAST 83

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  +S         +    T    + + P + + E                  GLTE   
Sbjct: 84  GVTVSIHTSFCCWPILAFGTEEQKQKYLPDLAAGE-------------KLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   +D +I+ A  + ++G   +   + +  
Sbjct: 131 GTDAAMQATTASDEGDH-YLLNGSKIFITNGSYADVYIIFAVTDKKLGKKGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +   ++K+G R +AT EL F N         N+     +  KI +  LD   + +
Sbjct: 190 MEGFTFGSKEHKMGIRGSATYELVFDNVKVP---KENLLGEAGKGFKIAMATLDGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +       A  Y + R   G  +      +  +AD+   + AA  L +R A   
Sbjct: 247 AAQALGIAQGAIDAAAAYVKERIQFGKPISAFQNTQFTLADMQTRVDAARLLVYRAACMK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +  + +A+ A       K +  + A  V ++A++  GG GY  E  + R  R++   
Sbjct: 307 TAGEKYTAQASMA-------KLYASETAGYVTSKAVQLFGGYGYTREYPVERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   +
Sbjct: 360 EIYGGTSEVQKMVIAADM 377


>gi|284048908|ref|YP_003399247.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953129|gb|ADB47932.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 635

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 146/380 (38%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P     ++     G     + + +            A          AG ++S 
Sbjct: 32  DKENKFPD--EQVKEMGELGWMGIPFPKEYGGAGLDYISYAIAVEELARVDGGAGVILSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V+  S  +    T    + +   + S                    GLTE   G+D   
Sbjct: 90  HVSLGSYPIFAFGTEEQKRKYLVPLASG-------------KKIGAFGLTEPNAGSDAGE 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +  +      + L+G+K F+++   +D +++ A  E   G   +   + +    G  +
Sbjct: 137 TETTAEFDGTH-WILNGNKIFITNAGKADTYVVFAVTEPGKGTRGISAFIVEKGMPGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331
               +K+G RS+AT EL F+N     L   N+     +  KI +  LD   + ++   + 
Sbjct: 196 GDHYDKLGIRSSATAELIFNNVK---LPKENLLGKRGQGFKIAMATLDGGRIGIAAQALG 252

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+     A++Y++ R      +     +   +AD+A  + AA  L +  A    E +  
Sbjct: 253 IAQGAYEAALNYSKERIQFNAPICQNQGVSFKLADMATKLRAARFLVYSAAELKQEHQDY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E+A A++       +    A ++  +A++  GG+GY++   + R YR++   +I  G+
Sbjct: 313 GMESAMAKM-------YASDAAVSITNDALQIFGGTGYLKGMDVERFYRDAKITTIYEGT 365

Query: 447 GNAMVLDVLNLLEKGTNLFE 466
                + + + +    ++ +
Sbjct: 366 NEIQRVVIASHITDKMSVAK 385


>gi|254247246|ref|ZP_04940567.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124872022|gb|EAY63738.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 595

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 95/492 (19%), Positives = 178/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFAE 477

Query: 493 LCKEDKGLARFL 504
                  +A F+
Sbjct: 478 TEGVKPEMAEFI 489


>gi|295400114|ref|ZP_06810094.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110641|ref|YP_003988957.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294977893|gb|EFG53491.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215742|gb|ADP74346.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 557

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/532 (21%), Positives = 222/532 (41%), Gaps = 49/532 (9%)

Query: 38  SSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
             D  L+A     L     +   KELE   +  ++   +          P+L  Y   G 
Sbjct: 6   DVDPNLLANLKKYLDKELYAYAEKELEQFYQLCMTDIDRRAVHTDREGQPRLIKYDRFGN 65

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
              +V  +  +    +++   G+   +  +    + RK  +    A+ YL++Q+E G   
Sbjct: 66  EISEVWVNEGYQQTAKQTYETGIVGYV-HKPIPELGRKGNYIYSYAQGYLLSQVETGVYC 124

Query: 153 SPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +  + +A ++       + K + P + S       +             LTE++GG+D
Sbjct: 125 PVTLTMATAYLLEHFADENLKKKYLPHVISTGEIELYEGATF---------LTERQGGSD 175

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRLLED 264
           + A   +     D         +  ++       +LA+++G       +  FLVP   ED
Sbjct: 176 VGANAVRAVPCGDHYKLFGEKYFASNAGRCGVAAVLARIDGSEPGTKGLSLFLVPWRNED 235

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N +  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +A+ S
Sbjct: 236 GTLNSIQIRRLKDKLGVRAVPSAEVVFDGAKAYVIGDPKKGFYYMMEALNLSRVCNAVGS 295

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-- 382
           +  M+ +L EA  YA  R   G  L D P+++  +AD+       T+  F + + F+   
Sbjct: 296 IGIMKRALEEAKQYAANRTAFGHKLTDYPMVRETLADLTARQEVQTSACFEMISVFERVM 355

Query: 383 ---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               ++  EE A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R++  
Sbjct: 356 TAPDEATEEEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNGYIEDFVTPRLLRDAQV 415

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL--------------GSSGKKVIT 485
            ++  G+ N + L+VL L+ K   + EQ  + + + L                   ++  
Sbjct: 416 LTVWEGTANILGLEVLRLMRK-YRVHEQFIAKMAEALSSLSDDVEPLASPVKQGLHELAE 474

Query: 486 ILRDSISLCKEDKGL-ARFLTEKIA-LASSAAALYRAGMND----IADVFLE 531
            L+      +E +   A+ +  ++  +  S  AL RA  N+    IA +FL+
Sbjct: 475 ALKRLDGQPEEVQTFHAKKIANRLCDIYLSVVALERAQENERNCLIAQLFLQ 526


>gi|99081398|ref|YP_613552.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037678|gb|ABF64290.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 593

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 104/530 (19%), Positives = 193/530 (36%), Gaps = 75/530 (14%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRS 123
               +E  ++A      L+      G R +  V + P  + A   +    G         
Sbjct: 38  GAVLEEAGKIARDVLHPLNVVGDTEGCRLENGVVYTPTGFKAAFEQVKEGGWPGLDMPEQ 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +                +  A          +  +AS +    T      + PK+ S E+
Sbjct: 98  YGGQNMPYVIGTAVGEFFSGANQAFTMYQGLTHGAASAILAHGTDAQKDTYLPKMVSCEW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYLVTGQKIFISAGDHDMS 204

Query: 243 ----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++ G       V  F+VP+ + +     G  NG+   +++ K+G   N+T 
Sbjct: 205 ENVIHLVLAKIPGGPDGIKGVSLFIVPKFIVNEDGTPGERNGVSVGKIEEKMGIHGNSTC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLGD++     +  M     L   +  ++    +   A+ YA+ R   G 
Sbjct: 265 VMNYDGAKGWLLGDMHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNAVEYAKDRLQ-GR 323

Query: 348 -------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--Y 392
                         LI  P ++R + D       A A     A   D+A    ++ A   
Sbjct: 324 DVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGATMIDKAHRSGDKDADGL 383

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  G+     L
Sbjct: 384 ISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQAL 443

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI--AL 510
           D++                L QD G   K V+         CKE+  ++    +     L
Sbjct: 444 DLVG-------------RKLAQDGG---KHVMAFFDMVKGFCKENAEISDAYAKDFIEPL 487

Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            +++  L  AGM      F++N       + +  L G  +  H+   + L
Sbjct: 488 KAASKDLQAAGM-----YFMQN----GMKNPNNALAGSTDFMHMFGHVCL 528


>gi|262371684|ref|ZP_06064963.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
 gi|262311709|gb|EEY92794.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
          Length = 593

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/517 (17%), Positives = 192/517 (37%), Gaps = 58/517 (11%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRS 110
            +++L  +         +E+A+ A   T  L       G RW+  +V     +    R+ 
Sbjct: 27  ANEKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKDAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   +    +   
Sbjct: 87  AEGGWIGLGADEEWGGQAMPKMLTVLADEMLFATNPSFLLYPLLSVGAGMALNSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGAGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    GFL+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATDRLQGRSASGVQSPSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A++  +      ++ PI K +    A     +A    GG G+I E  + +  R+
Sbjct: 374 TKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGFIREWGMEQCIRD 433

Query: 437 SPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++   +++ G     +  + + +D  ++    +  ++D+ +  
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYIAEI-RDFANTLDADLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
             E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 493 ATEVEAVTQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|170051570|ref|XP_001861823.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167872760|gb|EDS36143.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 453

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 138/378 (36%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +PA    + R+   GL        +            A        +E 
Sbjct: 96  PVAAKIDREHCYPA--EQIARAGDLGLMAITLSERYGGTGLDYMAYAIA--------MEE 145

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                PS+     +       + + +     S E                   L+E   G
Sbjct: 146 VSRGCPSIAVTMSIHNSLYLGLLEKYG----SEEQKERFLPGFLDGRRIACFALSEPGNG 201

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W      +   I+ A  +  +    +   +      
Sbjct: 202 SDAGAASTTATLKGDRWVLNGTKCWISGGYEATNGIVFATTDKSLKHKGISAFVVPMDSK 261

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G   ++T +L F +     +   N+   P    KI +  LD+  + V+G
Sbjct: 262 GLSRGKNEDKLGLNGSSTCQLIFEDC---EIPKDNLIGQPGYGFKIAMQSLDAGRIGVAG 318

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     A+ YA +R   G  +    +++  IAD+++ + +A  L++R A   D 
Sbjct: 319 QALGIAQASLECAVDYANKRTAFGKPISKLQMIQSKIADMSVRLESARLLTWRAAWLKDN 378

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A++ A  T  +C         + M+ +GG GY+ +    R+YRE+    I
Sbjct: 379 KHPFTKEAAQAKLAASETATFC-------AHQCMQVLGGMGYVTDMPAERYYREARITEI 431

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 432 YEGTSEIQRLVIAGQVIK 449


>gi|268568006|ref|XP_002640134.1| Hypothetical protein CBG12633 [Caenorhabditis briggsae]
          Length = 421

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 122/307 (39%), Gaps = 31/307 (10%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++  + +    + + PKI S                     L+E   G+D  A+ +  
Sbjct: 133 APLIIQLGSEEQKQKYLPKIVS--------------EAIGSFALSETGSGSDAFALKTTA 178

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D         W  ++  +  F++ A  +   G   +   L D +  G+   + ++K
Sbjct: 179 KKDGDDFVISGSKMWITNAGHAQFFLVFANADPSKGYKGITCFLVDRNQEGVSVGKKEDK 238

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI- 336
           +G RS+ T  + F N          +     +  K  I  L++  + +    + LA+   
Sbjct: 239 LGIRSS-TCSVHFDNVRVHKSA---ILGEYGKGYKYAIECLNAGRIGIGAQMLGLAQGCF 294

Query: 337 ----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y ++R   G  LID   M+  I  + ++I AA  L +  A   +       EAA 
Sbjct: 295 DQTIPYLQQREQFGQRLIDFQGMQHQIGQVRMEIEAARLLVYNAARMKENGLPFVREAAM 354

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +  ++A    ++ +E +GG G+ +E  + + YR+S   +I  G+ N  + 
Sbjct: 355 A-------KLFASQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLN 407

Query: 453 DVLNLLE 459
            +  L++
Sbjct: 408 TIAKLVD 414


>gi|289812368|ref|ZP_06542997.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 327

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 116/305 (38%), Positives = 175/305 (57%), Gaps = 1/305 (0%)

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+
Sbjct: 1   RLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNAS 60

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + AI++A +R   G
Sbjct: 61  AEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFG 120

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI+QP+M++ ++ +AL +   TAL FRLA ++++ +  ++EA +AR+  P  K+  CK
Sbjct: 121 KPLIEQPLMRQTLSRMALCLEGQTALLFRLARAWEQ-RREAKEALWARLFTPAAKFAICK 179

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                +AEAME +GG GY EE  + R YRE P NSI  GSGN M LDVL +L K   +++
Sbjct: 180 QGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYD 239

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
            L     +  G        + +    L K D+ + R +T+++ L    A + R     +A
Sbjct: 240 VLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLRHASPPLA 299

Query: 527 DVFLE 531
             + +
Sbjct: 300 QAWCQ 304


>gi|254428949|ref|ZP_05042656.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195118|gb|EDX90077.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 386

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 130/366 (35%), Gaps = 27/366 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W++    P    +  ++   G  C +    +  +     + +          L  
Sbjct: 33  PFNEEWEQQGVVP--KDVWLKAGEQGFLCPMVGEEYGGIGADFLYSVVINEEISKLGLTG 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +   A  +    +  + + + PK+ + E                 + +TE   G
Sbjct: 91  IGWGLHTEIVAPYIEHNGSEVLKQKYLPKMVTGEM-------------IGAIAMTEPGAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   K  D  Y L+G K F+++   +D  I++A+ +   G   +   + +   
Sbjct: 138 SDLQGVKTTAVKDGDH-YVLNGSKTFITNGQNADIVIVVAKTDPTKGAKGISLFVVETDS 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G    +   K+G ++  T EL F +        L     G V  MK L    L  +I  
Sbjct: 197 EGFEKGKNLKKVGMKAQDTSELFFQDVRVPAENLLGEEGMGFVYLMKELPQERLGISIGG 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  I Y + R   G  +      +  IA++   +  A A   R         
Sbjct: 257 LAMAESALAHTIEYVKERKAFGKPIAGFQNTQFKIAEMHTKLEVARAYVDRCLELH---- 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +       A   KY+   +   VI E ++  GG GY+ E  IAR + +S    I  
Sbjct: 313 ---LKKELDIPTAAAGKYYITDLQCEVIDECLQLHGGYGYMWEYPIARMFADSRVQRIYG 369

Query: 445 GSGNAM 450
           G+   M
Sbjct: 370 GTNEIM 375


>gi|229592982|ref|YP_002875101.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364848|emb|CAY52895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 592

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/535 (18%), Positives = 191/535 (35%), Gaps = 62/535 (11%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAW 103
           L A   +V  + +E + E     TA+ +A ++             G RWD   V     +
Sbjct: 28  LPALADTVDAETVEAILEEAGKVTAKSIAPLSRGG-------DEQGCRWDNTAVFTPDGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               +     G      D +F  +   +A   +   +   + L  G     +  +   + 
Sbjct: 81  PQAYKTYAEGGWVGVGGDPAFGGMGMPKAVSAQVEEMINSSSLAFGLYPMLTSGACVSIN 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + PK++S E+             A  + LTE   GTD+  I ++ +  +D
Sbjct: 141 THASEDLKATYLPKMYSGEW-------------AGSMCLTEAHAGTDLGIIRTKAEPQAD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G Y +SG K F++    D       ++LA++         +  FLVP+ + +     G  
Sbjct: 188 GSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGER 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++ 
Sbjct: 248 NTVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGVGIQGLAS 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
              S   AI YAR R  S               +I  P ++R +  +        A S  
Sbjct: 308 GERSYQNAIEYARDRVQSRAPTGAQAKDKVADPIIVHPDVRRMLLTMKASNEGGRAFSTY 367

Query: 376 LANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +A   D AK      +R        ++ P+ K +   +         +  GG GYI E  
Sbjct: 368 VATQLDIAKFSEDAVARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYIREWG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD++   ++  G   +      +   + S+G ++    
Sbjct: 428 QEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRAFIASAGPELAEFT 487

Query: 488 RDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMNDIADVFLENRFLDNC 538
           +           L  ++ ++         +A+  Y      +A  ++  R     
Sbjct: 488 KPLGVAVDNLDELTAWVLDRAKTNPNEIGAASVEYLHAFGYMAYAYMWARMAKAA 542


>gi|332016277|gb|EGI57190.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 411

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 144/383 (37%), Gaps = 32/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P     +++    GL       + +           A          A
Sbjct: 53  PIAAETDKKHLFP--KEQIKKMGELGLMGLCIPEALDGTGLDYLAYSIAMEEISRGCASA 110

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +     +    T +  + +     S E                   L+E   
Sbjct: 111 GVIMSVQNSLYLGPIDAFGTDKQKEKYIVPYISGE-------------KIGCFALSEPGN 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +             W  ++  + A I+ A  +       +  ++ D   
Sbjct: 158 GSDAGAASTTAKADGSIYTINGTKSWITNAFEASAIILFATTDKSKKHKGISAIVMDSPT 217

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +         N+   P    KI ++ LD+  + ++
Sbjct: 218 AGLSLGKKEDKLGIRGSSTCSLIFEDCQVPQD---NILGKPGMGFKIAMMTLDAGRIGIA 274

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +I    +++ IAD+AL + ++  L++R A   D
Sbjct: 275 AQALGIAQASLDCAMDYASKRQAFGQSIIKLQAIQQKIADMALKLESSRLLTWRAAQLKD 334

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    RHYR++    
Sbjct: 335 NGKPYTKEAAMAKLSASETATFC-------AHQCLQILGGMGYVSDMPAERHYRDARITE 387

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K   L
Sbjct: 388 IYEGTSEIQRLVIAANLIKEYGL 410


>gi|325479667|gb|EGC82759.1| butyryl-CoA dehydrogenase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 378

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 146/379 (38%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+    P     + +    G     +D  +  +      + +    L  +    
Sbjct: 25  PLAIEVDEKHMFPE--ENVAKMQELGFFGIPFDEEYGGIGLDTLTYVLAVEELSKVCATT 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A  +    T    + +   + S E                   LTE   
Sbjct: 83  GVIVSAHTSLCADCINKFGTDEQKEKYLTPLASGE-------------KLGAFALTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD +   +  +   D  Y L+G K F+++   +D +++ A  +   G   +   + +  
Sbjct: 130 GTDASGQKTVAKLDGDN-YILNGSKIFITNAGYADTYVVFAMTDKEQGTRGISAFIVEKG 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G  +   ++K+G + ++T+EL F +        L       +    +  LD   + ++
Sbjct: 189 MEGFDFGTTEDKMGIKGSSTMELIFRDCKVPKENMLGEEGKGFKY--AMQTLDGGRIGIA 246

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE     +I Y + R+  G  L      +  +A++A+DI +A  L ++ A   D
Sbjct: 247 AQALGIAEGALEKSIKYVKERNQFGRPLAKFQNSQFKLAEMAIDIESARHLVYKAACLKD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S +  AA A++ A        ++A  V  +A++  GG GYI+E  + R  R++    
Sbjct: 307 AGESYTVAAAEAKLKAA-------RVAMDVTTKAVQLFGGYGYIKEYEVERMMRDAKITE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+   M++ V   L K
Sbjct: 360 IYEGTSEVMLMVVSGALLK 378


>gi|323486322|ref|ZP_08091647.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum
           WAL-14163]
 gi|323693887|ref|ZP_08108075.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323400304|gb|EGA92677.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum
           WAL-14163]
 gi|323502038|gb|EGB17912.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 384

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 140/385 (36%), Gaps = 39/385 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       + +         + +    L  +    
Sbjct: 26  PLAQEVDETEHFPTG--TVEKMQKLGFMGIPVPKEYGGQGCDPLTYAMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCCDPIQTYGTEEQKQKFL-------------VPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++   +D ++++A     E   G     +   
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKIFITNGKEADVYVIIAVTGIKEDARGRKKKEISAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + +    G  +   + K+G R +AT EL F++     +   N+     +   I ++ LD 
Sbjct: 190 IVEKGTPGFTFGTKEKKMGIRGSATYELIFTDCR---IPKENLLGQQGKGFGIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + LAE      + Y + R   G  +      +  +AD+A  + AA  L +R
Sbjct: 247 GRIGIAAQALGLAEGALERTVEYVQERKQFGRTIGQFQNTQFQLADMATKVKAAQLLVYR 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K  S EAA A       K +  ++A  V  +A++  GG GY  E  + R  R
Sbjct: 307 AAMAKKTQKVYSVEAAMA-------KLYAAEVAMEVTTKAVQLHGGYGYTREYDVERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+     + +   L K
Sbjct: 360 DAKITEIYEGTSEVQRMVISASLLK 384


>gi|83643532|ref|YP_431967.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83631575|gb|ABC27542.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 386

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD     P     +R++   G         +  +   +                 
Sbjct: 26  PYAAEWDATAHFPV--ETIRKAGEMGFLSLYTPEEWGGLGLPRLDSSIIFEELSWGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  M+A      + + W PK+ S E             +     LTE   G
Sbjct: 84  TAYLTIHNMATWMIASFGHDELRQAWLPKLVSGE-------------LLASYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K     Y ++G K F+S   S D  +++A+  G  G   V  L+     
Sbjct: 131 SDAASLRTSAKKDGSD-YVINGSKMFISGAGSTDVLVVMART-GEPGAKGVSALVVPADA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y R ++K+G  S  T  + F N        L     G    M  L    ++ A  S
Sbjct: 189 PGVAYGRKEDKMGWNSQPTRAITFDNVRIPQTNRLGAEGEGFKFAMMGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  A  Y + R   G  L D   ++  +AD+A D+ AA  +    A   D   
Sbjct: 249 IGTAQAALETAQRYMQEREQFGRKLSDFQALQFKLADMATDLVAARQMVRLAAFKLDSKH 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A   + + K +       +  +A++  GG GYI E  + R+ R+S  + IL 
Sbjct: 309 PE------ASTYSAMAKRFATDAGFKICNDALQIHGGYGYIREYPLERYVRDSRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 363 GTNEIMRVIIARRL 376


>gi|114569090|ref|YP_755770.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339552|gb|ABI64832.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 388

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 142/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++         +  ++   G+ C      +        H+              
Sbjct: 36  PNAERWEEQGMVD--REIWTKAGKAGILCPSVPEEYGGAGGDWGHEYVFHTAGAEIGAGG 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +   A  V    +    K   P++ S               +   + ++E   G
Sbjct: 94  WGVGLHNSIIAPYVTHYGSEDQKKSVLPRMISG-------------DLIGAIAMSEPGTG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGS- 266
           +D+ ++ +   K  +G Y ++G K F+++  S  FI ++A+ +   G   V  L+ +   
Sbjct: 141 SDLQSVKTTAIKDGNG-YRINGQKTFITNGGSANFIIVVAKTDPEKGYDGVSLLMVETDK 199

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAI 322
             G    RL +K+G ++  T EL F + +      L      G ++ M+ L    L  A+
Sbjct: 200 VEGFRRGRLLDKVGMKAQDTAELFFEDVWVPADALLGQEEGQGFIQLMQQLPQERLQIAV 259

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +L E I+Y + R   G  ++     +  +A+       A   +   +    +
Sbjct: 260 QGVGAMKRALHETINYTKEREAFGRPILKFQNTQFKLAECKTKATLAEVFTHHCSERLMK 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +  A+ A       KYW  +    V+ E ++  GG GY+ E  IA+ + +S    I
Sbjct: 320 GELDAATASMA-------KYWVSEAQNEVMDECVQLHGGYGYMREYPIAKMWTDSRVQRI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M L +   L
Sbjct: 373 YGGTNEIMKLLIARTL 388


>gi|121535631|ref|ZP_01667437.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
 gi|121305801|gb|EAX46737.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans
           Nor1]
          Length = 377

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 152/401 (37%), Gaps = 39/401 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  L    QEL  +A   TP        G      E  P    LL++    G+       
Sbjct: 9   QLALKKMVQEL--VAKEITPYALEMDKTG------EIRP---ELLKKLDEAGMLNLTVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            ++         +  A +Y   +L  G     +  +A+ +A            P + S  
Sbjct: 58  EYDG---PGLDAVSIALIY--EELGKGCAGVATTVAANALASY----------PVLTSGT 102

Query: 183 YDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
            +   K   +  +       LTE   G+D  A+ +   K  D  Y L+G K F+++  ++
Sbjct: 103 DEQKQKFFSVINSGKMAAFALTEPGAGSDAGAVATSAVKDGD-YYVLNGTKCFITNGGIA 161

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D +++ A      G   +   + +    G    + ++K+G R++ T EL   N       
Sbjct: 162 DIYVVFANARKSAGIRGLTAFIVERDTPGFSVGKDEDKMGIRASNTCELILDNVRIPAAN 221

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    MK L         +SV   + +   A+ Y+R R   G  +    +++ 
Sbjct: 222 RIGREGEGFKIAMKTLDAARPFVGAVSVGLAQAAFELAVKYSREREQFGKPIASFQLVQA 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A+ I AA  L ++     D+    ++EAA A+        +    A  V  + ++
Sbjct: 282 MIADMAMQIEAARLLVYKACWMKDQGLPYAKEAAMAKC-------FAADTAMKVTTDVVQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG GY ++    ++ R++    I  G+     L + N +
Sbjct: 335 VLGGYGYTKDYPAEKYMRDAKIMQIYEGTNQIQRLVIANNI 375


>gi|330818283|ref|YP_004361988.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
 gi|327370676|gb|AEA62032.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
          Length = 595

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 101/490 (20%), Positives = 183/490 (37%), Gaps = 71/490 (14%)

Query: 55  HKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERW--DKVEFHP-AWHALLRRS 110
           H +L+      ++   +E  +  A    P        G ++  D V   P  +    R+ 
Sbjct: 31  HADLD---ADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYEGDGVVKTPTGFKEAYRQY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTP 168
           I  G      D  +          +  A   +M        M P ++  +   L     P
Sbjct: 88  IDAGWPALGCDPDYGGQGLPAF--VNNALYEMMNSANQAWTMYPGLSHGAYECLHAHGAP 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + PK+ S E+  T             + LTE   GTD+  + ++ + I+ G Y +
Sbjct: 146 ELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPITGGAYSI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCY 272
           SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+  
Sbjct: 193 SGTKIFISSGEHDMAKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIKC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    V+ 
Sbjct: 253 GSIEHKMGIHGNATCVMNLDNATGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             ++ YA+ R                  +I  P ++R +         A A ++  A   
Sbjct: 313 QNSLTYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQI 372

Query: 381 DEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D+  S  +E      A    ++ PI K +    A      AM+  GG G+I E  + ++ 
Sbjct: 373 DKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQYV 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R++  N I  G+ +   LD+L     G             D+G+  KK   I+ + +   
Sbjct: 433 RDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGAIVTEFVEAE 479

Query: 495 KEDKGLARFL 504
                +A F+
Sbjct: 480 GVKPEMAEFV 489


>gi|291336326|gb|ADD95886.1| acyl CoA dehydrogenase [uncultured marine bacterium
           MedDCM-OCT-S08-C1068]
          Length = 587

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 90/449 (20%), Positives = 176/449 (39%), Gaps = 57/449 (12%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
              LA++ + N   L      G     V   P +    ++ I DG      D  F     
Sbjct: 53  ILPLAKIGDENPAVLE----NGV----VRTPPGYKEAYQKYIEDGWTSLSCDPKFGGQGM 104

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +        +   A L        S+ + + +       + + + PKI   ++  T   
Sbjct: 105 PKTVSAFFDEMLSSASLSFKLYSELSIGAYNCINHHAPEEIKEKYLPKIVEGKWSGT--- 161

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + LTE   GTD+  + ++  + SDG Y +SG K F++S   D       +
Sbjct: 162 ----------MCLTEPVCGTDLGLLKTKAAQQSDGTYKISGQKIFITSGDHDLTENIIHL 211

Query: 245 MLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA+          +  FLVP+ + +     G  NG+    +++K+G + +AT  L F  
Sbjct: 212 VLARSTDSPAGTKGISLFLVPKFIVNDDGTVGQRNGISTGSIESKMGIKGSATCVLNFDE 271

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+++G  +     +  M  L  +   I  +    ++   ++ YA+ R   G       
Sbjct: 272 ATGYMIGSKDKGLNAMFTMMNLERIVVGIQGLGISEIAYQNSLAYAKERKQ-GKTNNTKS 330

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANS------FDEAKSRSEEAAYARIM 396
                 +I+   +++++ ++   I    AL F L+          + K + E + Y  +M
Sbjct: 331 TNGADFIIEHADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDDKIKQEASDYVSLM 390

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDV 454
            P+ K     +A  +  +AM+  GG GY +++ I + YR++    I  G+ +     L  
Sbjct: 391 TPVVKSLFTDLAMEITNDAMQIHGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLVF 450

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             L  K  N+ ++    ++ +  S  +KV
Sbjct: 451 RKLSNKNGNIIQKFLDMVKVETDSKNEKV 479


>gi|255570831|ref|XP_002526368.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223534327|gb|EEF36039.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 406

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 140/376 (37%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P   + D+    P    L +      LH     +      +    H I    +   +   
Sbjct: 51  PHASKIDQTNNFPKEVNLWKLMGDFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSV 110

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P   + + PK+ S E+                L ++E   
Sbjct: 111 ALSYGAHSNLCINQLVRNGSPAQKQKYLPKLISGEH-------------VGALAMSEPNA 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +   +  G        W  + P++   ++ A+ + + G   +   + +   
Sbjct: 158 GSDVVSMKCKADCVDGGYILNGNKMWCTNGPVAQTLVIYAKTDVKAGSKGITAFIIEKGM 217

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F N F      L      V  M   + L+  ++S   
Sbjct: 218 PGFSTAQKLDKLGMRGSDTCELVFENCFVPDENVLGQEGKGVYVMMSGLDLERLVLSAGP 277

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K
Sbjct: 278 LGIMQACLDVILPYIRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDRGK 337

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++ A   + A        + A  V  +A++C+GG+GY+ E    R  R++    I  
Sbjct: 338 VDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGA 390

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 391 GTSEIRRMIIGRELFK 406


>gi|332211989|ref|XP_003255101.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Nomascus leucogenys]
          Length = 432

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 308 CFDYTIPYIKERVQFGRRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 368 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 421 LNTIAKHID 429


>gi|107023656|ref|YP_621983.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116690741|ref|YP_836364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|170734083|ref|YP_001766030.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|206559277|ref|YP_002230038.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia cenocepacia J2315]
 gi|105893845|gb|ABF77010.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116648830|gb|ABK09471.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
 gi|169817325|gb|ACA91908.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
 gi|198035315|emb|CAR51190.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Burkholderia cenocepacia J2315]
          Length = 595

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 95/492 (19%), Positives = 178/492 (36%), Gaps = 75/492 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           ++ +  G      D  +       A    A    L +  +A  +       A   +    
Sbjct: 85  QQYVEAGWPALGCDPDYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHG 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y
Sbjct: 144 APELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG+
Sbjct: 191 SISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGI 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G   N+T  +      G+++G+ N     +  M     L   +  +    V
Sbjct: 251 KCGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   ++ YA+ R                  +I  P ++R +         A A ++  A 
Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + +
Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +   
Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFAE 477

Query: 493 LCKEDKGLARFL 504
                  +A F+
Sbjct: 478 AEGVKPEMAEFI 489


>gi|85374006|ref|YP_458068.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis
           HTCC2594]
 gi|84787089|gb|ABC63271.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis
           HTCC2594]
          Length = 601

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 87/444 (19%), Positives = 168/444 (37%), Gaps = 54/444 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +     +    G         F        H +        A       M P +
Sbjct: 73  VTTPDGFKEAFDQYRESGWGTISQPEEFGGQGMP--HVLGFVIEEFTATANQAFGMYPGL 130

Query: 157 TSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T+ ++ AL+   +P   + + PK+ S E+  T             + LTE   GTD+  I
Sbjct: 131 TTGAISALIAKGSPEQQEMYLPKMISGEWTGT-------------MNLTEPHCGTDLGLI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
            ++ +  +DG Y ++G K F+S+   D       ++LA+  G       +  F+VP+ + 
Sbjct: 178 RTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIV 237

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           D     G  NG+    +++K+G   NAT  + + +  G+++G+ N     +  M     L
Sbjct: 238 DEDGNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              I  +    V+   A+ YA  R                  +   P ++R + D     
Sbjct: 298 GVGIQGLGQAEVAYQNAVAYALDRRQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFT 357

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               AL    A   D        + R+E  A   +M P+ K +      A+  +  +  G
Sbjct: 358 EGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYGTDKGYAIATDMQQVFG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478
           G GYIEE  ++++ R++    I  G+     +D+    L + G    +  F  + +++  
Sbjct: 418 GHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAE 477

Query: 479 S-GKKVITILRDSISLCKEDKGLA 501
           + G + +  + + +     ++  A
Sbjct: 478 AKGNETLAPMAEKLEKALNEQQAA 501


>gi|194700346|gb|ACF84257.1| unknown [Zea mays]
 gi|195642912|gb|ACG40924.1| isovaleryl-CoA dehydrogenase [Zea mays]
 gi|223947637|gb|ACN27902.1| unknown [Zea mays]
          Length = 407

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 141/423 (33%), Gaps = 27/423 (6%)

Query: 43  LVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           L AL+    P      L      +   T ++             A  P     D     P
Sbjct: 5   LPALLRRAAPGGGAARLLATSSLLFDDTQEQFKESVRKFA--QEAIAPRAAAIDASNHFP 62

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSAS 160
               L R      LH       +  +      H I    +   +        + S    +
Sbjct: 63  RDVDLWRLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEITRASGAVGLSYGAHSNLCIN 122

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +     P     + PK+ S E+                L ++E   G+D+ ++  + +K
Sbjct: 123 QLVRHGNPEQKLKYLPKLISGEH-------------IGALAMSEPNSGSDVVSMKCKAEK 169

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +  G        W  + P +   ++ A+ +   G   +   + +    G    +  +K+G
Sbjct: 170 VDGGYVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKLDKLG 229

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIH 337
            R + T EL F N F      L      V  M     L  L  A   +  M+  L   + 
Sbjct: 230 MRGSDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLP 289

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++        
Sbjct: 290 YVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKD-------C 342

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  + A  V  +A++C+GG+GYI E    R  R++    I  G+     + +   
Sbjct: 343 AGVILFAAENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGTSEVRRMIIGRE 402

Query: 458 LEK 460
           L K
Sbjct: 403 LFK 405


>gi|163751337|ref|ZP_02158563.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161328746|gb|EDP99893.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 385

 Score =  287 bits (735), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 150/400 (37%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   ++ A +A      +L    P   +WD+    P    +++R+   G       
Sbjct: 2   DFNLSDDQRQFADLAQKFSQDELA---PFAAQWDREHHFP--KDVIQRAGELGFCSLYSP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +           M       +++       MV    T  + K+W+  + + 
Sbjct: 57  LSEGGMGLSRLDSSIIFEQLSMGCTSTTAMLTIHNMVTWMVTSFGTETLRKEWSESLTTG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A++ ++  +  D  Y +SG K F+S   + 
Sbjct: 117 -------------QKLASYCLTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGAT 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++    G+ G   +  ++      G+ Y + ++K+G  +  T E+ F+     +   
Sbjct: 163 ELLVVMCRTGQDGPKGISAIVVPADAKGVTYGKAEDKMGWNAQPTREITFNQVRVPVTNL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++ AI SV   + +L  A  Y + R   G  +     ++  
Sbjct: 223 LGEEGQGFTFAMKGLDGGRINIAICSVGTAQAALERATQYMQERQQFGKPIATFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  L    A   D           A     + K +   +   V   A++ 
Sbjct: 283 LADMATELVAARQLVRLAAFKLDCGDPE------ASAYCAMAKRFATDVGFQVCDAALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ E  + R+ R+   + IL G+   M L +   L
Sbjct: 337 HGGYGYLREYPLERYVRDVRVHQILEGTNEIMRLIIARRL 376


>gi|71895109|ref|NP_001026411.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Gallus gallus]
 gi|53132103|emb|CAG31873.1| hypothetical protein RCJMB04_12m17 [Gallus gallus]
          Length = 433

 Score =  287 bits (735), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 128/353 (36%), Gaps = 23/353 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        +            A+   ++  +E    + P+V     +    T R+
Sbjct: 99  FEQGLMSIELGEEYGGTG--------ASFFSVILAVEELAKVDPTVALMCELQNTLTNRL 150

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +       E       P           L+E   G+D  ++ ++ +K  D       
Sbjct: 151 FTTY-----GTEEQKRTYLPRVSKDTIGSFCLSEAGSGSDAFSLKTRAEKKGDYYIINGS 205

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W   +  +  F ++A  +   G   +   + D    GL   + ++K+G R+++T  + 
Sbjct: 206 KMWITLAEHAGVFFVMANTDPASGYKGITCFIVDRDTEGLHVGKKEDKLGIRASSTCPVT 265

Query: 291 FSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N        LG +         M     +  A   +   +     A+ Y + R   G 
Sbjct: 266 FENVKVPETNILGQIGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGK 325

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D   M+  IA +A  + AA  L++  A   +  K   +EA+ A       KY+  ++
Sbjct: 326 RIFDFQAMQHQIAQVATQLEAARLLTYNAARLAETGKPFIKEASMA-------KYYAAEV 378

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A    ++ +E +GG G+ +   I ++YR+    +I  G+ N  +  +   L +
Sbjct: 379 ATLTTSKCIEWMGGVGFTKNYPIEKYYRDCKIGTIYEGTSNIQLSTIAKSLAQ 431


>gi|51892709|ref|YP_075400.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856398|dbj|BAD40556.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 381

 Score =  287 bits (735), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 139/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           PG    DK    P    L+R+    GL    +   +        ++ +    +  +    
Sbjct: 28  PGAAERDKTGRFPV--ELVRKMGELGLMGIPFPEKYGGTGGDTVSYVLAVEEISRVDGSL 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +        V    T    + W P     EY                 GLTE   
Sbjct: 86  GITLAAHCSIGMGPVYSFGTEEQKRRWLPGAARGEY-------------LASFGLTEPGA 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPRLLEDGS 266
           G+D AA  +   +  DG + L+G K F+++     +I+  A      G   +   +    
Sbjct: 133 GSDAAATKTTAVRDGDG-WVLNGSKVFITNANYCGYIVCTAVTRPGQGHRGISAFIVPNP 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G        K+G RS+ T  L F N        L            +  LD   +S+ 
Sbjct: 192 TPGFTIGPAYEKMGLRSSDTRPLFFDNVRLPADALLGREGEGFRQF--MATLDGGRISIG 249

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+     A+ YA++R   G  +     ++  +AD+A++I  A  +  + A   D
Sbjct: 250 AMAVGIAQGALDAALAYAKQRVQFGQSISKFQAIQFKLADMAMEIELARNMVLKAAWLKD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + EAA A       K +  + A     +A++  GG+GY+E+  ++R +R++    
Sbjct: 310 QGRPFTREAAMA-------KLFASETAVRAANQAIQIHGGAGYMEDLPVSRFWRDAKLTE 362

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 363 IGEGTSEIQRLVIARQL 379


>gi|331003827|ref|ZP_08327319.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330412019|gb|EGG91416.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 384

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 144/385 (37%), Gaps = 39/385 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P     D+ E  P     +R+    G       + F        A+ +    +  +    
Sbjct: 26  PLAVEVDETEVFP--RETVRKMAKYGFLGIPVAKEFGGQGADPLAYVMCVEEISKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A  +A+  TP   + +               P+ K        LTE   
Sbjct: 84  GVIVSAHTSLCADPIAMYGTPAQKEKYLI-------------PLAKGEKLGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGCFLVPRL 261
           GTD     ++     D  Y L+G K F+++   +D ++++A  E           +    
Sbjct: 131 GTDAQGAVTKAVLDGDD-YVLNGSKIFITNGKEADIYVVIACTEIKVDAKGRQKKIFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + +    G  +   + K+G R ++T EL F++         N+     +   I ++ LD 
Sbjct: 190 IVEKDTPGFGFGTKEKKMGIRGSSTYELIFTDCRVP---KENMLGPAGKGFGIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +AE      I Y + R   G  +      +  +A++A  + AA  L +R
Sbjct: 247 GRIGIAAQALGIAEGALERTIAYVKERKQFGRSIGAFQNTQFELANMATKVKAAQMLVYR 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K+ SEEAA A       K +  ++A  V  +A++  GG GY  E  I R  R
Sbjct: 307 AAMAKATQKTYSEEAAMA-------KLFAAEVAMEVTTKAVQLHGGYGYTREYEIERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    +  G+     + +   L K
Sbjct: 360 DAKITEVYEGTSEVQRMVIAGSLLK 384


>gi|294812986|ref|ZP_06771629.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325585|gb|EFG07228.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 391

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 127/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       F          +            +
Sbjct: 39  PYAAAVDEEARFP--QEALNALVAGDLHAVHVPEEFGGAGADALATVIVIEEVARVCASS 96

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 97  SLIPAVNKLGSLPVILSGSDDLKKRYL-------------TPLAKGEAMFSYCLSEPDAG 143

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 144 SDAAGMKTKAVRDGDHWVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKSDP 203

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 204 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 263

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y R R   G  + D   ++  +AD+A+ + AA  L++  A   +   S
Sbjct: 264 GIAQGALDYAKGYVRERKQFGKPIADFQGVQFMLADMAMKLEAARQLTYAAAAKSERVDS 323

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 324 D------LTFFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 377

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 378 TNQVQRIVMARNL 390


>gi|224368186|ref|YP_002602349.1| Acd4 [Desulfobacterium autotrophicum HRM2]
 gi|223690902|gb|ACN14185.1| Acd4 [Desulfobacterium autotrophicum HRM2]
          Length = 379

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                 D+ +  P W    +     GL   +    +          + A      +    
Sbjct: 26  ATAAERDQTKEFP-WKNFKQMG-ELGLMGMMIPTEYGGEGADAVSYVLALSEIAYSCAST 83

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS  +      +    T    + +               P+ +  +     LTE   
Sbjct: 84  SVVMSVQNSIVCESINRFGTEEQKQTFL-------------VPLAQGEIIGAFALTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  + T+   +  D  Y ++G K F++S  +  A I+ A+ +       +   L    
Sbjct: 131 GSDPVSQTTTAVRD-DNNYVINGTKRFITSGKNSRAVIVTAKTDETARHKGISAFLVAKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIM 323
             GL    +++K+G R++ T +L F N        L N   G    M  L    +  A  
Sbjct: 190 TPGLIVGHMEDKMGLRASDTTDLIFENCRVPASALLGNEGDGFKIAMAGLDSGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +L  ++ YA++R   G  + +   ++  IAD+A  I AA  L    A+  D  
Sbjct: 250 SLGVAQAALDASVKYAKKRKQFGKAIANHQGIRWQIADMATQIEAARQLVMSAASMKDRK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ + +A+ A       K +  +M   V A A++  GG G+ ++  + R YR++   +I 
Sbjct: 310 ENYTTQASMA-------KLFASEMVNQVTARAIQIHGGYGFTKDYPVERFYRDARVFTIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + + N + K
Sbjct: 363 EGTSEIQRIVISNSVLK 379


>gi|311032765|ref|ZP_07710855.1| hypothetical protein Bm3-1_19884 [Bacillus sp. m3-13]
          Length = 568

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 106/449 (23%), Positives = 199/449 (44%), Gaps = 33/449 (7%)

Query: 35  NAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L  ++             KEL  LGE   +   +          P+L  Y  
Sbjct: 6   NFFTEDEHLQQILKQHLDPQLYEWAEKELADLGESCANEIEERAVHTDREGQPRLIKYNK 65

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    + R+  +    A+ YL++Q E G
Sbjct: 66  MGEDVSEVWVNEGYKKTVEETYNRGIVGYV-HKEIPALGRQGNYLYSYAQGYLLSQTEPG 124

Query: 150 HLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +  + +A ++       V   + P + S       +             LTE++G
Sbjct: 125 FYCPVTLTMATAYLLDHYADQHVKNKFLPHVISTGEVELFEGATF---------LTERQG 175

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVP 259
           G+D+ A  +Q         Y L+G K+F  ++      ++LA++ G       +  F VP
Sbjct: 176 GSDVGANETQAVPHPSKHTYLLTGEKYFASNAGQCGVAMVLARIPGAPKGTKGLSLFAVP 235

Query: 260 RLLEDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
              EDGS   NG+  +RLK+K+G R+  + E+ F++  G+L+G+ +     + +   L  
Sbjct: 236 WKKEDGSGKLNGIEIRRLKDKLGVRAVPSAEVLFNDAEGYLVGEPSKGIHYMMEALNLSR 295

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +AI S+  MR +  EA +YA+ R   G  LI+ P+++ ++ D+A+ +    + SF L 
Sbjct: 296 VCNAIASLGIMRRAYTEARNYAKNRVTFGDRLINFPMIRESLVDMAVKLEVELSASFELV 355

Query: 378 NSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             FD            EE A  R++  + K    + A     EA+E  GG+G+IE+    
Sbjct: 356 ALFDRVMRNDGVKVSEEEIALNRLLIALLKKETAEQAVHFSHEAIEMHGGNGFIEDFVTP 415

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R  R++   ++  G+ N + ++VL L+ +
Sbjct: 416 RLLRDAQVLTVWEGTANILGMEVLRLMGR 444


>gi|297530310|ref|YP_003671585.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297253562|gb|ADI27008.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 560

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/488 (23%), Positives = 211/488 (43%), Gaps = 32/488 (6%)

Query: 36  AYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            Y  D  L+A +             ++L    E+ L+   +          P+L  Y   
Sbjct: 4   LYEVDPNLLANLKRHLDDELYRYAEEKLASFYEFCLTDVDRRAVHTDREGQPRLIKYDRF 63

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G    +V  +  +    +++   G+   +  +    + RK  +    A+ Y+++Q E G 
Sbjct: 64  GNDISEVWVNEGYEQTAKQTYETGIVGYV-HKPIPELGRKGNYVYSYAQGYILSQAEPGF 122

Query: 151 LMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               +  + +A ++      ++   + P + S       +             LTE++GG
Sbjct: 123 YCPVTLTMATAYVLEHFADEKLKATYLPHVISTGEVELYEGATF---------LTERQGG 173

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRL 261
           +D+ A   +     D  Y L G K+F  ++      ++LA+++G       +  FLVP  
Sbjct: 174 SDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSLFLVPWR 232

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +A
Sbjct: 233 KEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPAKGFYYMMEALNLSRVCNA 292

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + SV  M+ +L EA  YA RR   G +L D P+++  +A++       T+  F +   FD
Sbjct: 293 VASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETLANLTARQEVETSACFDMIALFD 352

Query: 382 EAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R+
Sbjct: 353 RVMAAPHEANEAEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVTPRLLRD 412

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +   ++  G+ N + L+VL L+ K   + E+  + +++ L      V  + R      KE
Sbjct: 413 AQVLTVWEGTANILALEVLRLMRK-YRIHERFAAEMQERLERLAADVKPLARPVEEGLKE 471

Query: 497 D-KGLARF 503
               LAR 
Sbjct: 472 WGAALARL 479


>gi|254503869|ref|ZP_05116020.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439940|gb|EEE46619.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 595

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 141/564 (25%), Positives = 234/564 (41%), Gaps = 49/564 (8%)

Query: 16  HQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCT 69
           H    +    N   P   G+N Y  D  L  L++ +      + +   LE  G  V    
Sbjct: 7   HHTLPTPELANLVAPDCHGLNFYGIDKSLEDLVSLYLPDDLRAHLEPHLEKFGALVG-DE 65

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVV 128
             + +RMA+ + P LH   P G   D +EFHPA+  +   ++ D GL   I         
Sbjct: 66  VDDWSRMADKHIPVLHHRDPRGRFEDWIEFHPAYRNMEDVALGDYGLAAMIHKPGMFGWD 125

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           +  +H ++    Y+  Q E G L   S       A  TT  + KD+  +     +     
Sbjct: 126 KPMSHTVKFIFQYIFGQSEFGQLCPIS-------ATETTATLIKDYGDEATKARFYDGLT 178

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           +   KT +     +TE+ GG+D++ I  +  +  DG + L G KWF S    D  ++LA+
Sbjct: 179 SQDTKTMLKGAQFMTERPGGSDVSNIQLEA-RFEDGNWKLYGEKWFCSCTDGDVALLLAR 237

Query: 249 VEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD- 301
            +G       +G F +PR L+DGS N     RLKNK+G+RS A+ E+ F     + LG+ 
Sbjct: 238 PQGAPAGNKGLGLFALPRRLDDGSRNSYRIVRLKNKLGSRSMASGEIVFDGAVAYPLGEV 297

Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
               N     + D   L  L     + + MR  L EA+  A+ RH     +ID+P+++R 
Sbjct: 298 GPHENKGLKMMMDQVSLSRLSHGCRAAAMMRRCLNEALVTAQNRHAFQEKIIDKPLLRRQ 357

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAME 417
           +  + +    A +++  L N    A++  E A    RI+ P  KY   +    V   AME
Sbjct: 358 LMKLMVPTEQALSITLYLGNQISLAEAGDERAQKITRILTPAHKYRTARDNVRVATGAME 417

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL- 476
             GG+GYIE+   AR  R++    +  G+ N   LD+           + L   L   + 
Sbjct: 418 VRGGNGYIEDFVNARLVRDAHLGVLWEGTSNINSLDITTRAIAKVGAHKDLKDELMDQID 477

Query: 477 ------GSSGKKVITILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMNDI 525
                 G    ++ + ++ +I   ++     ++ LAR  +  +  +++A  L   G    
Sbjct: 478 TSSDMPGQFKGELRSTVQQAIDFAEDVAMSGNQTLARKASSAVYNSATATLLATEGSA-- 535

Query: 526 ADVFLENRFLDNCHSTHCMLHGRF 549
                             +L  R 
Sbjct: 536 --------LGAAGRDARRLLLARM 551


>gi|89092144|ref|ZP_01165099.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92]
 gi|89083879|gb|EAR63096.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92]
          Length = 595

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/471 (19%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++S   +E A+ A      L+      G  WD   V     +    ++ +  G      
Sbjct: 37  DMVSAIMEEGAKFAERVLSPLNQVGDQQGCTWDDGAVITPEGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           +  +      ++  I    +   A          S  + + +    T    + +  K+ S
Sbjct: 97  ETEYGGQGLPESLGILINEMVGTANWSWSMYPGLSHGAMNTLDAHGTEDQKQTYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +   DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQEDGSYKISGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATV 287
           D       I+LA++         +  F+VP+ L +  G  NG+    L++K+G   NAT 
Sbjct: 204 DMADNIVHIVLARLPDAPEGTKGISLFIVPKHLPETLGEDNGVSCGSLEHKMGIHGNATC 263

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + F N  G+L+G  N     +        L +A+  ++        ++ YA+ R     
Sbjct: 264 VMNFDNATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEWGFQNSLVYAKDRLQMRA 323

Query: 348 ------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEA 390
                        +I  P +++ +           AL +  A   D     E + +++  
Sbjct: 324 LTGPARPDKPADPIIVHPEVRKMLLTQKAFAEGGRALIYYCAQLVDKVKLAEGEEKAQAD 383

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+    
Sbjct: 384 ALLAFLTPIAKAFLTEVGFESANHGLQIFGGHGFIAEWGMEQNVRDSRISMLYEGTTQIQ 443

Query: 451 VLDVLN---LLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            LD+L    L+ +G +L  F ++     Q    +   +   ++  + L KE
Sbjct: 444 ALDLLGRKVLMTQGESLKGFTKILHKFCQAESDNAD-LAEFIKPLVELNKE 493


>gi|313672308|ref|YP_004050419.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939064|gb|ADR18256.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 379

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 151/380 (39%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+    P   +L+++    GL  +     +          I        A    
Sbjct: 26  PLAQQIDREHKIPD--SLIKKMADLGLLGTYIPEEYGGAGMDYFSYIMTVEEVSKACGST 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   + A    L        K + P +              K      + LTE   
Sbjct: 84  GVMISAHTSLACDPILSFGNEDQKKKYLPLL-------------AKGEKIGCILLTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A I +  ++  D  + L+G+K F+++       ++ A  +  +    +   + D  
Sbjct: 131 GSDVANIQTTYKREGD-YFILNGNKIFITNGGFKGIGVVFASFDRSLKHKGLSAFIIDLE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G+   + + K+G R + T  + F+N    +    N+     +  KI +  L+   + +
Sbjct: 190 SEGVEILKNEEKMGIRGSYTTAIGFNNVKIPV---ENLLGKEGDGFKIAMETLNGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  + +   ++  +AD+   I  A  ++++ A   
Sbjct: 247 AAQALGIAEGAFERALAYSKERKQFGKPISENQAIQFKLADMIAKIETAKLITYKAAWLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  K+ + E+A       I K +  ++A  V  EA++  GG GYI E  + R YR++   
Sbjct: 307 NMKKTNAMESA-------ICKMYASEVATYVTKEAVQIFGGYGYICEYEVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +  +L K
Sbjct: 360 EIYEGTNEVQRIVISKMLLK 379


>gi|254391645|ref|ZP_05006843.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326441467|ref|ZP_08216201.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197705330|gb|EDY51142.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 388

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 127/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       F          +            +
Sbjct: 36  PYAAAVDEEARFP--QEALNALVAGDLHAVHVPEEFGGAGADALATVIVIEEVARVCASS 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 94  SLIPAVNKLGSLPVILSGSDDLKKRYL-------------TPLAKGEAMFSYCLSEPDAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 141 SDAAGMKTKAVRDGDHWVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKSDP 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 201 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y R R   G  + D   ++  +AD+A+ + AA  L++  A   +   S
Sbjct: 261 GIAQGALDYAKGYVRERKQFGKPIADFQGVQFMLADMAMKLEAARQLTYAAAAKSERVDS 320

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 321 D------LTFFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 374

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 375 TNQVQRIVMARNL 387


>gi|295836976|ref|ZP_06823909.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697435|gb|EDY44368.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 382

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 133/375 (35%), Gaps = 24/375 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
            GP     D+    P             LH      ++          +           
Sbjct: 28  IGPHAAEVDEQGRFP--QEARDALTAADLHAVHVPENYGGAGADALATVLVIEEVARVCA 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  + + +   +  V L  +  +   +               P+ K        L+E  
Sbjct: 86  SSSLIPAVNKLGSLPVILSGSEELKAKYL-------------GPLAKGDAMFSYALSEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++  +  D        +W  ++ +SD + ++A  +       +   + + S
Sbjct: 133 AGSDAAGMKTKAVRDGDSWVLNGVKRWITNAGVSDFYTVMAVTDPAKRSKGISAFVVEKS 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  
Sbjct: 193 DEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQ 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I+AA AL+++ A + +  
Sbjct: 253 ALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKISAARALTYQAAAASERG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A    +    K +   +A  V  +A++ +GG GY  +  + R  R++    I 
Sbjct: 313 D------ADLTYLGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 367 EGTNQVQRIVMARNL 381


>gi|56966249|pdb|1UKW|A Chain A, Crystal Structure Of Medium-Chain Acyl-Coa Dehydrogenase
           From Thermus Thermophilus Hb8
 gi|56966250|pdb|1UKW|B Chain B, Crystal Structure Of Medium-Chain Acyl-Coa Dehydrogenase
           From Thermus Thermophilus Hb8
          Length = 379

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 148/399 (37%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     ++    P  + +D+ E  P    ++ +    GL  +I   
Sbjct: 2   DFSLTEEQRQLQALARRFAKEVIL--PVAQEYDEKEEVP--WPVIEKLHEVGLLNAIIPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +  K   ++        A +    +   S    + V L  T    + +        
Sbjct: 58  EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFL------- 110

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 111 ------RPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEW 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V   +    V  L+ +    G    ++  K+G R++ T EL F +    +   L
Sbjct: 165 VVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRL 224

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M+ L    +  A  SV   R +L EA  YA+ R   G  + +   ++  +
Sbjct: 225 GEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D+ + I  A   ++  A   D+    +  +A       I K +  ++A     +A++  
Sbjct: 285 VDMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  + +  R+   N I  G+     L +   +
Sbjct: 338 GGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHI 376


>gi|291000919|ref|XP_002683026.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi]
 gi|284096655|gb|EFC50282.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi]
          Length = 404

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 140/386 (36%), Gaps = 28/386 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLM 143
               P   + D+    P    L ++    GL     D  +         H +    L   
Sbjct: 40  EEISPIAAQVDQTNSAPV-RDLWKKMGDLGLLGITIDPEYGGTGLGVFEHTLAVEELSRG 98

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S      +  +      + + PK+ S E+                L ++
Sbjct: 99  SGSIALSYGAHSNLCVDRIFRIGNKEQKEKYLPKLISGEH-------------VGALAMS 145

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++ ++ +K  D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 146 EPNSGSDVVSMKTRAEKKGDKYILNGNKMWITNGPDADVLVVYAKTDISAGSKGITAFII 205

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           +    G    +  +K G R + T EL F +    +    NV     E +K+L+  LD   
Sbjct: 206 EKGFKGFSTAQKLDKCGMRGSNTCELVFQDCEVPV---ENVLGKVNEGVKVLMSGLDYER 262

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             ++G  + L E        Y   R   G  + +  +M+  +AD+   +    +  + +A
Sbjct: 263 CILAGGPLGLMEGCMDVVVPYVHERKQFGQSIGEFQLMQGKLADMYTKLNVCRSYVYSVA 322

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D     S  +   R        +  + A  + ++A++ +GG+GY +E  + R +R++
Sbjct: 323 RACDL----SPTSKPLRKDCAGAILYAAEGATWLASQAIQTLGGNGYTKEYPVERIWRDA 378

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
               I  G+     + +   L + T 
Sbjct: 379 KLYEIGAGTSEIRRMLIGRELFEETK 404


>gi|260777485|ref|ZP_05886379.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607151|gb|EEX33425.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 384

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 139/381 (36%), Gaps = 26/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +L+ +   G            +   +           M     
Sbjct: 26  PMAAEWDEKQLFP--KDVLKAAGELGFLSLYTPEDQGGLQLSRLDSSIIFEQLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       M+A   T    +++ PK+ + ++                  LTE   G
Sbjct: 84  TAFMTIHNMVTWMIASFATEEAKEEFCPKLITGDW-------------LGSYCLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++T+  +K  D      G  +   +  ++  +++A+  G      +   +      
Sbjct: 131 SDAASLTTSAKKQGDEYIINGGKTFISGAGDTEVLVVMART-GDSSAKGISAFVIPADAE 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S+
Sbjct: 190 GISYGRKEPKMGWNSQPTRAITFDNVVVPEKYLLGKEGEGFTFAMKGLDGGRINIATCSI 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L E + Y + R   G  L     ++  +AD+  ++ AA  +    A+  D    
Sbjct: 250 GTAQQALNEVMQYVKERKQFGKELAQFQGLQFRLADMVTELVAARQMVRLAASKLDNQDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   +   +  +A++  GG GYI+E  + RH+R+   + IL G
Sbjct: 310 E------ATAYCAMAKRFATDVGFKICDQALQLYGGYGYIKEYPMERHFRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNL-LEKGTNLF 465
           +   M L +    L +G+ L 
Sbjct: 364 TNEIMRLIIARRTLAEGSQLL 384


>gi|302551893|ref|ZP_07304235.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469511|gb|EFL32604.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 385

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 139/390 (35%), Gaps = 25/390 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ++ R A  +  +     P     D+    P     L   + + LH       F       
Sbjct: 17  DMLRDAVRSLAE-AKIAPYAAAVDEEARFP--REALEALVANDLHAVHVPEEFGGSGADA 73

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              +            +  + + +   +  V L  +  + K +              +P+
Sbjct: 74  LATVIVIEEVARVCASSSLIPAVNKLGSLPVILSGSEELKKKYM-------------SPL 120

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D A + ++  +  D        +W  ++  S+ + ++A  + 
Sbjct: 121 AKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGDHYVLNGVKRWITNAGESEFYTVMAVTDP 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   + + S  G+ +   + K+G + + T E+   N        +    TG   
Sbjct: 181 TKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFAT 240

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I+A
Sbjct: 241 AMKTLDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKISA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+++ A + +         A    +    K +   +A     +A++ +GG GY  + 
Sbjct: 301 ARALTYQAAAASERGD------ADLTYLGAAAKCFASDVAMEATTDAVQLLGGYGYTRDY 354

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + +   L
Sbjct: 355 PVERMMRDAKITQIYEGTNQVQRIVMARNL 384


>gi|15559225|gb|AAH13756.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens]
 gi|312150506|gb|ADQ31765.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic
           construct]
          Length = 432

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 308 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 368 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 421 LNTIAKHID 429


>gi|110833432|ref|YP_692291.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646543|emb|CAL16019.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 382

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 132/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W++    P    +  ++   G  C +    +  +     + +          L  
Sbjct: 29  PFNEEWEQQGVVP--KDVWLKAGEQGFLCPMVSEEYGGIGADFLYSVVINEEISKLGLTG 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +   A  +    +  + + + PK+ + E                 + +TE   G
Sbjct: 87  IGWGLHTEIVAPYIEHNGSEVLKQKYLPKMVTGEM-------------IGAIAMTEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   K  D  Y L+G K F+++   +D  I++A+ +   G   +   + +   
Sbjct: 134 SDLQGVKTTAIKDGDH-YVLNGSKTFITNGQNADIVIVVAKTDPTKGAKGISLFVVETDS 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G    +   K+G ++  T EL F +        L     G +  MK L    L  ++  
Sbjct: 193 EGFEKGKNLKKVGMKAQDTSELFFQDVRVPAENLLGEEGMGFIYLMKELPQERLGISVGG 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  I Y + R   G  +      +  IA++   +  A A   R         
Sbjct: 253 LAMAESALAHTIEYVKERKAFGKPIAGFQNTQFKIAEMHTKLEVARAYVDRCLELH---- 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +       A   KY+   +   VI E ++  GG GY+ E  IAR + +S    I  
Sbjct: 309 ---LKKELDIPTAAAGKYYITDLQCEVIDECLQLHGGYGYMWEYPIARMFADSRVQRIYG 365

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   +
Sbjct: 366 GTNEIMKGIIAKAV 379


>gi|289582756|ref|YP_003481222.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532309|gb|ADD06660.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 383

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 148/381 (38%), Gaps = 32/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E +D  E +P  H ++ ++   GL  S     +                        
Sbjct: 26  PVAEEYDTEEKYP--HDVIDKAAEMGLTGSYIPIDYGGAGYSILDTAIITEELFSYDPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +      +    T    + +               P+       G  ++E   G
Sbjct: 84  ALSIVSTSFGCEAIMNFGTEDQKERFLE-------------PVAMGEKISGAAISEPDTG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           +D+++++++ +K  D         W  +  + D F++L +   + +       +++ +  
Sbjct: 131 SDVSSVSTRAEKDGDEWVINGNKMWITNGTVGDFFVVLCKTNPDAQGRYNGFSQIIVESD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            +G   +++  K+G R++ T EL F +          V T     M+ + + D    +V+
Sbjct: 191 RDGFSAEKITGKLGIRASDTAELVFDDVRVPEENL--VGTKDAAFMQQMQFFDETRTAVA 248

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A      A+ YA+ R   G  + +   ++  +A++A D  AA  L+++ A + D
Sbjct: 249 AQGVGIAKGATRAALEYAQDREQFGQSISEFQAIQHKLAEMATDTEAARNLTYKAAWNVD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    ++       +A + K +  ++A  V  EA++  GG+GY+ +  + R YR++    
Sbjct: 309 QGNDITK-------LASMAKEYASRIAVDVADEAVQIHGGAGYVNDFPVERLYRDAKITQ 361

Query: 442 ILLGSGNAMVLDVLN-LLEKG 461
           I  G+       +   +L KG
Sbjct: 362 IYEGTSEIQKNVIAREMLGKG 382


>gi|156357138|ref|XP_001624080.1| predicted protein [Nematostella vectensis]
 gi|156210834|gb|EDO31980.1| predicted protein [Nematostella vectensis]
          Length = 422

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 133/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  ++ DK    P      ++    G H          +      H I    +  ++   
Sbjct: 62  PYADQIDKENNFPKLREFWKKLGDLGFHGITVPVDDGGIGSGYMEHIIVLEEMSRVSGSI 121

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +A        + + PK+ S E+                L ++E   
Sbjct: 122 ALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGEH-------------IGALAMSEANA 168

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDG 265
           G+D+ ++  +  K  D         W  + P +D  I+ A+     +     +   L + 
Sbjct: 169 GSDVVSMKLRADKDGDHYVLNGHKMWITNGPDADVLIVYAKTNPSSKKPEHAITTFLVEK 228

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R + T EL F N       ++G++N     +     +  L  A 
Sbjct: 229 GMPGFSTSPKLDKLGMRGSNTCELVFDNCRIPAENVMGEVNKGVYVLMSGLDIERLILAA 288

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+  L   + Y   R   G  + +  +M+  +AD+   + A  +  + +A + D 
Sbjct: 289 GPVGLMQACLDVTVPYLHARTAFGQKIGEFQMMQGKMADMYTRLNACRSYLYTVARACDA 348

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +++             +  + A  V  +A++C+GG+GYI +    R  R++    I
Sbjct: 349 GHISNKD-------CAAIILYTAENATQVALDAIQCLGGNGYINDYPTGRFLRDAKLYEI 401

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +     K
Sbjct: 402 GAGTSEVRRLIIGRAFNK 419


>gi|84514409|ref|ZP_01001773.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84511460|gb|EAQ07913.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 592

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 103/539 (19%), Positives = 199/539 (36%), Gaps = 76/539 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV------EFHPAWHALLRRSI 111
            E L         +E  ++A   T  LH     G+R   V           +     +  
Sbjct: 29  FEDLERDFTGAVVEEAGKVA---TAVLHPLNAVGDREGCVLENGVVRTPAGFKDAFEQMK 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D ++            A   ++ A +        +  + S +    +    
Sbjct: 86  KGGWTAMDCDPAYGGQGLPYVMHTAAQEPFVSANMAFNMYQGLTHGAYSAIYAHGSDEQK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ + E+  T             + LTE   GTD+  + ++     DG Y +SG 
Sbjct: 146 QTYLPKLTTCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSYKISGQ 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       ++LA+++G       V  F+VP+++ +     G+ NG+   ++
Sbjct: 193 KIFISAGDHDLAENIIHLVLAKIQGGPDGIKGVSLFIVPKIMVNDDGSLGARNGVSVGKI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + K+G   NAT  + + +  GFL+G+ +     +  M     L   +   +    +   A
Sbjct: 253 EEKMGIHGNATCVMNYDDATGFLVGEAHKGMRAMFTMMNEARLGVGLQGYAQAESAYQNA 312

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA  R                  LI  P ++R + D    +  A A ++  A   D A
Sbjct: 313 VAYANDRLQGRAVTGAENPDGPADPLIVHPDIRRNLMDQKSFVEGARAFTYWGAYLIDRA 372

Query: 384 KSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S++ A     +M P+ K +           A +  GG GYIEE  ++++ R++    
Sbjct: 373 HRNSDKDADGLISLMTPVIKGFLTDKGFEYATAAQQVYGGHGYIEEWGMSQYARDARIAM 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD++                L  D G        +++  I   + ++ L 
Sbjct: 433 IYEGANGIQALDLVG-------------RKLALDGGKHVMAFFEMIKTFIKENEGNEALN 479

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +     + L +++  L  AGM      F++N       + +  L G ++  H++  + L
Sbjct: 480 KDFL--VPLKAASKDLQAAGM-----YFMQN----GMKNPNNALSGSYDFMHMMGHVCL 527


>gi|186472522|ref|YP_001859864.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194854|gb|ACC72818.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 384

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 131/356 (36%), Gaps = 26/356 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPR 169
              GL        +  +      ++ AA     A      L+ + +   +  + +  T  
Sbjct: 45  RELGLFGLSIPEEYGGLGLTMEEEVLAAFEIAKASPAFRSLIGTNNGIGSQGLVIDGTDE 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + PK+ S E             +     LTE   G+D A++ +   +  D      
Sbjct: 105 QKQYYLPKLASGE-------------LIASFALTEPGSGSDAASLRTTALRDGDHYVING 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P +  + ++A+      G   +   + +    GL   ++  K+G +   T +
Sbjct: 152 TKRFITNAPEAGIYTVMARTSPDSKGAGGISAFIVEKGTPGLSLGKIDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  + + V      L +A+ YA  R  
Sbjct: 212 VIFENCRVPASNMIGGKEGVGFKTAMKVLDKGRLHISAICVGAAERMLDDALRYAMERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA ++    A   DE    S E       A   K + 
Sbjct: 272 FGQPIAEFQLVQAMLADSRAEIYAARSMVLDAARRRDEKHDVSTE-------ASCCKLFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +M   V   A++  GG+GY+ + ++ R YR+     I  G+     L +   + +
Sbjct: 325 SEMCGRVADRAVQIHGGAGYVSDYAVERFYRDVRLFRIYEGTTQIQQLVIARNMIR 380


>gi|327482496|gb|AEA85806.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 592

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 107/590 (18%), Positives = 205/590 (34%), Gaps = 80/590 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR-MAN 78
           D  F LN+         + +  L  AL A    VV  E             +E  +  AN
Sbjct: 10  DMRFVLNEV--------FDAPKLWQALPA-LAEVVDAE-------TADAILEEAGKITAN 53

Query: 79  YNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
              P   +    G RWD   V     +    +     G      D +F  +   +    +
Sbjct: 54  SIAPLNRSGDEEGCRWDDGAVSTPAGYREAYQLYAEGGWVGVGGDPAFGGMGMPKVISAQ 113

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              +   A L  G     +  +   +    +  + + + P +++  +             
Sbjct: 114 VEEMMNSASLAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVW------------- 160

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251
           +  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++  
Sbjct: 161 SGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPD 220

Query: 252 ------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
                  +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+++G
Sbjct: 221 APAGSRGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348
           + N     +  M     L   I  ++    S   AI YAR R  S               
Sbjct: 281 EPNKGLAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADP 340

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKY 402
           +I  P ++R +  +        A S  +A   D AK   +EAA         ++ P+ K 
Sbjct: 341 IIVHPDVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQLAEAQVALLTPVAKA 400

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEK 460
           +   M         +  GG G+I E    +  R+     I  G+     LD++   ++  
Sbjct: 401 FLTDMGLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGS 460

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAA 516
           G  +++     +   + S+G  +        +       L  ++ ++         +A+ 
Sbjct: 461 GGTMYQAFVDEIRAFVASAGADLREFTEPLKAALDNLDELTAWVIDQAKANPNEIGAASV 520

Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHC--------MLHGRFNAAHIIDSL 558
            Y       A  ++  R      +           +   RF  A ++  +
Sbjct: 521 EYLHVFGYTAYAYMWARMAAVALAKQGEGDFYQSKLGTARFYFARLLPRI 570


>gi|255319399|ref|ZP_05360615.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255303535|gb|EET82736.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 593

 Score =  287 bits (734), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 87/534 (16%), Positives = 194/534 (36%), Gaps = 58/534 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRS 110
            ++ L  +         +E+A+ A   T  L+      G +++   V     +    R+ 
Sbjct: 27  ANENLNHVDAATAEAILEEMAKFAQNVTLPLNRSGDEEGAQYNNGTVTTPAGYKEAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   +    +   
Sbjct: 87  AEGGWIGLGADEEWGGQAMPKMLTVLADEMLFATNPAFMLYPLLSVGAGMALNSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    GF++G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATDRIQGRSASGIKSPNKVADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                + ++  +      ++ PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRD 433

Query: 437 SPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++   L++      E+  + + +D  ++    +  ++D+ +  
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
             + + ++RF+ E+ +     ++S A  +   +  ++  ++  R          
Sbjct: 493 ATDIEAVSRFIIEQASEKPDFSNSVAVDFLHAVGLLSFSYMFARIAAAAKDKSG 546


>gi|315048815|ref|XP_003173782.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311341749|gb|EFR00952.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 431

 Score =  287 bits (734), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 147/415 (35%), Gaps = 32/415 (7%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F      EL  L + V           A    P+         R D+    PA   + ++
Sbjct: 42  FTPPTEDELTELRDTVR--------EFAKREIPE-----EVAARTDQENQFPA--EMWKK 86

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      D  +  +    QAH I    L   +   A    + S    + + L  +P
Sbjct: 87  FGEAGFLGVTADEKYGGLGMGYQAHCIVMEELSRASGSIALSYAAHSQLCVNQLCLNGSP 146

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P + S E                 L ++E   G+D+ ++ ++ + +  G    
Sbjct: 147 EQKERFLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTKAKAVDGGFVLN 193

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T E
Sbjct: 194 GTKMWITNGPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGE 253

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F +       +LG LN     + +   L  L  +   +  M+  L   + Y   R   
Sbjct: 254 LIFEDVFVPHANVLGKLNKGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQF 313

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD+   +AA+ A ++  A   D++   S+              +  
Sbjct: 314 GMPIAHNQLIQGKLADMYTKLAASRAFTYNTARHVDQSAVSSDGTQVKTQDCAGAILYAA 373

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 374 ERATECTLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 428


>gi|138893854|ref|YP_001124307.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134265367|gb|ABO65562.1| Acyl-coA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 386

 Score =  287 bits (734), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 139/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLE 147
           P     ++ +  P    ++ +S   GL        +  +      K      L       
Sbjct: 26  PVAMDIEENDHIPE--DIIEKSKEMGLFGLSIPEEYGGLGLSMVGKCAIYEELGKTHNGY 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +  + T    + + PK+ + E+                  LTE   
Sbjct: 84  TTLIGAHTGIGTVGIVELGTEEQKQRYLPKMATGEW-------------IGAFALTEPSA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G++ AA+ +   +  D         +  ++  +  F ++A  +   G   +   + +   
Sbjct: 131 GSNAAALKTTAVRKGDRYIINGSKHYITNAVDAHVFTVMAVTDPSKGPKGITSFIVEKDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMS 324
            G     ++ K+G R + + EL F N    +   L     G +  +KIL       A  +
Sbjct: 191 PGFTIGNVERKMGLRGSHSAELFFDNLEVPVENVLGKEGEGYINALKILANGRAGLAARN 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      L   + YA +R   G  +I+Q  ++  +A++++ I    +  +R+A   D+  
Sbjct: 251 LGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAEMSMLIEVLRSTVYRVAWMVDQKM 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA       I K +  ++   +   A++  GG GY+++  I R++R++    I  
Sbjct: 311 RVVKEAA-------IAKLFGSEVYNKIADMAVQIHGGLGYMKDYPIERYFRDARITKIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       + N L K
Sbjct: 364 GTSEIQRNIIANELRK 379


>gi|301167941|emb|CBW27527.1| acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 343

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 30/355 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +                   + +     +S S  S S++A        
Sbjct: 9   ELGVAGVTIPEEYGGAGLSYQDLCVVLSELAKSSVSYAVTLSVSTMSQSILAEFGNEEQK 68

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K + P + S E                   L+E   G+D AA+ +  +K+  G       
Sbjct: 69  KKYLPALTSGE-------------EIAAFALSESHSGSDAAALKTTAKKVEGGYILNGTK 115

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  S  ++  +I++A+  G  G   +   +      G  Y + +NK+G + + T EL F
Sbjct: 116 MWITSGGIAKTYIVMART-GEEGHKGISAFIVRDGAEGFSYGKKENKMGWKVSPTRELVF 174

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAI-----MSVSGMRVSLAEAIHYARRRHVS 345
            N F     + ++        KI L  LD        ++V   + +L EA+ YA  R   
Sbjct: 175 ENCFVP---EEDLLQTEGMGFKIALSALDRGRITIGSIAVGLAQRALDEAVKYALDRKQF 231

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              + D   ++  + D+A ++  +  L    A +FD      + A  A++ A        
Sbjct: 232 NQAIFDFQGLQFMMTDMATEVECSRLLVEEAARNFDNGIKNQKVACMAKLKA-------T 284

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             A  V  +A++ +GG GY  E  + R  R++    I+ G+     + +   L+K
Sbjct: 285 DTAMKVTTDAVQVLGGVGYTSEYPVERFMRDAKVLQIVEGTNQIQKVVIGRCLKK 339


>gi|226364571|ref|YP_002782353.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243060|dbj|BAH53408.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 130/378 (34%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     L+  ++ G +       ++                      +
Sbjct: 33  PYAKEVDEDSRFPE--EALQALVNSGFNAIHVPEQYDGQGADSVATCIVIEEVARVCGSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P++ S E                   L+E+  G
Sbjct: 91  SLIPAVNKLGTMGLILNGSEELKQQVLPQLASGE-------------AMASYALSEREAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 138 SDAASMRTRAKADGDDWILNGSKCWITNGGKSSWYTVMAVTDADKGANGISAFMVHKDDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 198 GFVVGPKEKKLGIKGSPTAELYFENCK---IPGDRIIGEPGTGFKTALQTLDHTRPTIGA 254

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 255 QAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYTSAARAER 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++   K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 315 GEKN------LGFISAAAKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMRDAKITQI 368

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 369 YEGTNQIQRVVMSRALLK 386


>gi|188591922|ref|YP_001796520.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170938296|emb|CAP63281.1| Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 600

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 139/543 (25%), Positives = 226/543 (41%), Gaps = 33/543 (6%)

Query: 30  LFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
              G + +++D  L AL+  +      S +   LE +G         ELA +A+ N P+L
Sbjct: 27  DRQGGSLFAADPDLRALLPLYLPPDLFSHLLPHLERMGALAGG-VLDELAGVADRNPPEL 85

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                 G    +++ HPA+  + R +  + GL  +          +      + A  YL 
Sbjct: 86  SYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRSGVLGWDQPMPPAAKYALTYLF 145

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L     P +   + P + ++ +D   +  M          
Sbjct: 146 VQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRFLPNLTTQVFDDLYQGAMF--------- 196

Query: 202 LTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254
           +TE+  G+D+AA  ++  + +  +G + L G KWF S+P +   ++LA+VE   G     
Sbjct: 197 MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPDAALAMVLARVEDEAGNAVPG 256

Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                 FL+PR L DGS N     RLK+K+G RS A+ E+       +L+G+       +
Sbjct: 257 HKGVSLFLLPRKLADGSANHYRIIRLKDKLGTRSMASGEIRLEGAHAWLVGEPGRGFVQM 316

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            DM     L + + +   MR +L E +  AR R   G  L D P+M+R +  + L    A
Sbjct: 317 ADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRLQDMPLMRRQLLKLTLPTEQA 376

Query: 370 TALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             + F+ A +   A +   +A A  RI+ P+ K+  C+ A  V  +AME  GG GYIEE 
Sbjct: 377 RTMVFQTAEALRRADAGEADAYALMRILTPLIKFRACRDARKVTGDAMEIRGGCGYIEEW 436

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITI 486
           S  R  R++   SI  G+ N + LDVL  + +   L   +   + L  D           
Sbjct: 437 SDPRLVRDAHLGSIWEGTSNIVALDVLRAVRREGALPVLQAHLAGLLADTPMQAGARAVF 496

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
                S  +     A    +   LA  AA+      + +A  +   R           L 
Sbjct: 497 EGAIASAAQLAGHAAAAGADGELLARQAASALYHVTSAVAMAWEAGRIGSVRRMRLAQLV 556

Query: 547 GRF 549
            R 
Sbjct: 557 LRH 559


>gi|297564776|ref|YP_003683748.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296849225|gb|ADH62240.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 381

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 145/402 (36%), Gaps = 27/402 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L  +A     +     P    +D  E  P   A++ +    GL  +I   
Sbjct: 4   DFTLTDEQKQLQALARRFAKE--QIAPVASEYDAKEEVP--WAVIEKLFEVGLLNAIIPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +      ++          +    +   S    + V L  T    + +  K+    
Sbjct: 60  EYGGLGLGMLEEVIIGEELAWGCMGIYTIPMASDLGITPVLLAGTYEQKQRFFSKLT--- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              L+E   G+D AA+ ++  +  D         W  +   ++ 
Sbjct: 117 ----------AKPALAAFALSEPGNGSDAAALRTRAVRDGDYYILNGTKTWISNGGEAEW 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A +        V  L+ +    G    +L  K+G R++ T EL F +    +   L
Sbjct: 167 VVVFATINPEARHKGVVALVVEKGTPGFKANKLHGKMGQRASGTYELVFEDCRVPVANLL 226

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    +  A  S+   R +L EA  YAR R   G  + +   ++  +
Sbjct: 227 GQEGDGFKIAMNTLDKTRIPVAAGSIGVARRALDEASKYAREREAFGKPIAEFQAIQFKL 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ + I  A A ++  A   D+   ++  AA A+           ++A     +A++  
Sbjct: 287 AEMLMGIETARAYTYYAAWLTDQGLPQAHAAAIAKAY-------ASEIAFEAANQAIQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY+ E  + +  R+   N I  G+     L +   + KG
Sbjct: 340 GGYGYMREYPVEKLLRDVKLNQIYEGTNEIQRLIIARHILKG 381


>gi|89097346|ref|ZP_01170236.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911]
 gi|89088169|gb|EAR67280.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911]
          Length = 557

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 114/494 (23%), Positives = 208/494 (42%), Gaps = 30/494 (6%)

Query: 34  MNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           MN Y  D  L  ++      +F +   KELE  G        +          P+L  Y 
Sbjct: 1   MNFYKDDPNLAFVLKQYMYEDFFAWAEKELEAFGGLCAGEIDERAVHTDREGQPRLIKYD 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G     V  +  +   + ++ + G+   +  +    + RK  +    A+ YL++Q E 
Sbjct: 61  KMGNDISHVWLNEGYKKTVEQTYNAGIVGYV-HKEIPELGRKGNYVYSYAQGYLLSQTEP 119

Query: 149 GHLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G     +  + +A ++       + + + P + S       +             LTE++
Sbjct: 120 GFYCPVTLTMATAYLIDHYADEELKEKYLPHVISTGETELFEGATF---------LTERQ 170

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEG------RVGCFLVP 259
           GG+D+ A   +   + DG Y + G K+F S+  +    ++LA+ EG       +  FLVP
Sbjct: 171 GGSDVGANEVKAV-LEDGQYRIYGEKYFASNAGACGVAMVLARREGAASGSKGLSLFLVP 229

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              E G  NGL  +RLK+K+G R+  + E+ F      L+GD +     + +   L  + 
Sbjct: 230 WRKETGELNGLEIRRLKDKLGVRAVPSGEVVFHGAEAHLVGDADKGIHYMMEALNLSRIC 289

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +++ S+  M+ +  EA  YA  R+  G  L D P++K  +A +A      T+  F L   
Sbjct: 290 NSVASIGIMQRAFLEAKQYAFVRNAFGSRLADFPMVKETLAKLACKQEVETSAVFSLIAL 349

Query: 380 FDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +D     ++  EE A  R++  + K    + A     E++E  GG+GYIE+    R  R+
Sbjct: 350 YDRVAAGEASREEEAMNRLLIALLKKETAEQAIHFAHESIEMHGGNGYIEDFVTPRLLRD 409

Query: 437 SPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +   ++  G+ N + L++L L+EK     LF     T  + L    ++    + + +   
Sbjct: 410 AQVLTVWEGTANILGLEILRLIEKFRADELFVGKIETELEGLDERLQEFAAPVYEGLLRL 469

Query: 495 KEDKGLARFLTEKI 508
           KE           +
Sbjct: 470 KELLAAVGRADRDM 483


>gi|254302099|ref|ZP_04969457.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322291|gb|EDK87541.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 378

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 137/404 (33%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +  T    +    
Sbjct: 52  ALEVPEQYGGPGLKRVDVAALIEEMAIADAGFATTISASGLAMKPVLISGTEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +                       LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LVLEGG--------------LGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  M+  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGEMASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPVIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + + N
Sbjct: 330 SEAIQIFGGYGYSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|109897274|ref|YP_660529.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109699555|gb|ABG39475.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 385

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 83/399 (20%), Positives = 143/399 (35%), Gaps = 29/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + LS   Q  A  A     Q  A  P   +WDK    P    +++++   G         
Sbjct: 3   FDLSEDQQAFADTARQFAEQ--ALAPNAAKWDKEHHFP--KDVIQQAGELGFCGLYTSEE 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
              +   +           M       +M+    +  M+A    P +   W P + +   
Sbjct: 59  DGGLGLSRLDSSIIFEQLSMGCTATTAMMTIHNMATWMIAKWGKPALKAKWCPDLVTG-- 116

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA 242
                       +     LTE   G+D AA+ +  +   D  Y L+G K F+S    +D 
Sbjct: 117 -----------KLLASYCLTEPGSGSDAAALRTSAKLDGDD-YVLNGSKMFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLL 299
            +++A+  G  G   +   L      G+ Y + + K+G  +  T  + F N       LL
Sbjct: 165 LVVMARTGGE-GPKGISAFLVPADAQGITYGKAEEKMGWNAQPTRLITFDNVRVSHINLL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD                ++ A  S+   + +L  A  Y + R   G  L     ++  +
Sbjct: 224 GDEGQGFSFAMQGLDGGRVNIATCSIGTAQQALNTATAYMKERTQFGKPLAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A   D                 + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQMVRLAAFKLDNKDPERSA------YCAMAKRFATDIGFEVCNQALQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + RH R+   + IL G+   M + V   L
Sbjct: 338 GGYGYIQEYPLERHVRDVRVHQILEGTNEIMRMIVGRRL 376


>gi|163846607|ref|YP_001634651.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524403|ref|YP_002568874.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667896|gb|ABY34262.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448282|gb|ACM52548.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 389

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     ++++   G     +   +  +      + +    L  +    
Sbjct: 26  PIARAIDEEERVP--FETMKKAAELGFLGVPFPERYGGLELGITGYCVLMEELNRVCASH 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + S  +A  + L  T +  + +   +              +        LTE   
Sbjct: 84  ATIIGAHSQLAAMSIYLGGTEQQKETYLRALI-------------EGRKWGAWALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           G+D A I +  ++  D         W  +   +D  ++ A  +  +G    +   + + +
Sbjct: 131 GSDAAHIQTTAERRGDEWVINGQKMWITNGSFADVIVVFAATDKNLGARGGITAFIVEKT 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    +++ K+G R++ T  L F +        L  V  G    M+ L          
Sbjct: 191 MPGFRVGKVEEKMGLRASHTASLYFEDCRVPAENVLGQVGMGFPLAMRTLDIGRCGLGAS 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +   +  Y   RH  G  + +   ++  +AD+A+ +     + +  A   D  
Sbjct: 251 SIGSAKEAFELSRRYMVERHQFGRPIAEFQALQFKLADMAVKLYTMEQIVYDCARRVDAG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E+        I K +C +MA  +I EA++  GG G+  E  + R YR++    I 
Sbjct: 311 QQATLES-------SIVKLYCTEMASQIIDEAIQIHGGMGFSRELPLERMYRDARVTRIF 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       + + L K
Sbjct: 364 EGTNEIQRHVIASELLK 380


>gi|117619749|ref|YP_856608.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561156|gb|ABK38104.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 382

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 140/375 (37%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    L  R    GLH       ++ V +   AH +   ++   +   
Sbjct: 26  PRASEIDQSNAFP--RDLWPRMGELGLHGITVAEEYDGVNLGYLAHVLVMEQVSRASASV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + P + S E+                L ++E   
Sbjct: 84  GLSYGAHSNLCINQIHRHGTPEQKARYLPDLVSGEH-------------VGALAMSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++     +  D         W  + P +D F++ A+ +   G   +   + +   
Sbjct: 131 GSDVVSMRLTAVREGDHFVLNGNKMWITNGPDADTFVIYAKTDPAAGPKGISAFIVEAGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R ++T EL F N        L    G V+ +        +  A   
Sbjct: 191 PGFSTAQKLDKLGMRGSSTCELVFDNCRVPQANLLGPLHGGVKVLMSGLDYERVVLAAGP 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y R R   G  + +  +++  +AD+   +A++ AL + +A++ D+A+
Sbjct: 251 LGIMQACMDVVLPYVRERKQFGQPIGEFQLVQGKLADMYTRLASSRALVYSVASACDQAR 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++             +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 311 TSRKD-------CAAAILFAAENATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGA 363

Query: 445 GSGNAMVLDVLNLLE 459
           G+       +   L 
Sbjct: 364 GTSEIRRWLIGRELM 378


>gi|196250572|ref|ZP_03149262.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196209921|gb|EDY04690.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 386

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 139/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLE 147
           P     ++ +  P    ++ +S   GL        +  +      K      L       
Sbjct: 26  PVAMDIEENDHIPE--DIIEKSKEMGLFGLSIPEEYGGLGLSMVGKCAIYEELGKTHNGY 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +  + T    + + PK+ + E+                  LTE   
Sbjct: 84  TTLIGAHNGIGTVGIVELGTEEQKQRYLPKMATGEW-------------IGAFALTEPSA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G++ AA+ +   +  D         +  ++  +  F ++A  +   G   +   + +   
Sbjct: 131 GSNAAALKTTAVRKGDRYIINGSKHYITNAVDAHVFTVMAVTDPSKGPKGITSFIVEKDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMS 324
            G     ++ K+G R + + EL F N    +   L     G +  +KIL       A  +
Sbjct: 191 PGFTIGNVERKMGLRGSHSAELFFDNLEVPVENVLGKEGEGYINALKILANGRAGLAARN 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      L   + YA +R   G  +I+Q  ++  +A++++ I    +  +R+A   D+  
Sbjct: 251 LGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAEMSMLIEVLRSTVYRVAWMVDQKM 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA       I K +  ++   +   A++  GG GY+++  I R++R++    I  
Sbjct: 311 RVVKEAA-------IAKLFGSEVYNKIADMAVQIHGGLGYMKDYPIERYFRDARITKIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       + N L K
Sbjct: 364 GTSEIQRNIIANELRK 379


>gi|28211699|ref|NP_782643.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204141|gb|AAO36580.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 394

 Score =  286 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 126/354 (35%), Gaps = 30/354 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL    + + +        ++ +    +              +   AS +    T    +
Sbjct: 64  GLLGLPFPKEYGGTGGDYFSYALAVEEISKACAATGISYSVSTSLCASPILQYGTEEQKQ 123

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +I S               V  G GLTE   GTD     +      D        K
Sbjct: 124 KYLSQIASG-------------KVLGGFGLTEPNAGTDAGGQQTTAVLDGDHYILNGEKK 170

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  +SP++D F++ A  +   G   +   + + S  G    +L++ +G R+    E  + 
Sbjct: 171 FTTNSPVADIFVVFAMTDKEKGPKGISAFIVEKSFPGFSIGKLEDTMGLRAAKVAETIYK 230

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           +         N+     +  KI +  LD   + V+   + +A+     A  Y   R   G
Sbjct: 231 DCKVP---KENLLGKEGDGFKIAMQTLDGGRIGVAAQALGIAQGAFEKAKKYMMERKQFG 287

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L     ++  +AD+ L I  A  L ++ A   D     S  AA A++ A         
Sbjct: 288 KALCKFQGLQWMMADMDLKIEQARYLVYKAAWEKDNGLPYSLSAARAKLAA-------TD 340

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V  EA++  GG GYI++  + R  R++    I  G+     + +   + +
Sbjct: 341 AAMFVTTEAVQLFGGYGYIKDYPVERMMRDAKITQIYEGTNQVQKMVIAGNIFR 394


>gi|320168731|gb|EFW45630.1| isovaleryl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 427

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 137/375 (36%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK    P      ++    G         +         H +    +   +   
Sbjct: 66  PHAAAIDKNNNFPGLRDFWKKCGSMGFLGVTAPEKYGGAGLGYFEHVLIMEEMSRASGAI 125

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 126 ALSYGAHSNLCVNQIVRNGTEAQKQKYLPKLISGEF-------------VGALAMSEPGS 172

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  ++ A+ + R G   V   L +   
Sbjct: 173 GSDVVSMQLRAEKKGDKYVLNGNKFWITNGPDADVLVVYAKTDVRGGSKGVTAFLVEKGF 232

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G       +K G R + T EL F +     +   NV  G  + + +L+       L  A
Sbjct: 233 KGFTTGPKLDKFGMRGSNTCELIFEDC---EIPAENVMGGVGKGVYVLMSGLDYERLVLA 289

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S   M+ +L  AI YA  R   G  + +  +M+  +AD+   +A++ +  +  A + D
Sbjct: 290 GGSTGLMQAALDIAIPYAHTRKQFGQKIGEFQLMQGKLADMYTKLASSRSFLYAAARAAD 349

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   ++ A   ++       C + A  V  EA++ +GG+GYI E    R  R++    
Sbjct: 350 RGEIDGKDCAAVILL-------CAENATQVCLEALQTLGGNGYINEYDTGRLVRDAKLYE 402

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     L +  
Sbjct: 403 IGAGTSEVRRLVIGR 417


>gi|261419729|ref|YP_003253411.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319766547|ref|YP_004132048.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376186|gb|ACX78929.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317111413|gb|ADU93905.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 560

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 110/495 (22%), Positives = 213/495 (43%), Gaps = 38/495 (7%)

Query: 36  AYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            Y  D  L+A +             ++L    E+ L+   +          P+L  Y   
Sbjct: 4   LYEVDPNLLANLKRHLDDELYRYAEEKLASFYEFCLTDVDRRAVHTDREGQPRLIKYDRF 63

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G    +V  +  +    +++   G+   +  +    + RK  +    A+ Y+++Q E G 
Sbjct: 64  GNDISEVWVNEGYEQTAKQTYETGIVGYV-HKPIPELGRKGNYVYSYAQGYILSQAEPGF 122

Query: 151 LMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               +  + +A ++      ++   + P + S       +             LTE++GG
Sbjct: 123 YCPVTLTMATAYVLEHFADEKLKATYLPHVISTGEVELYEGATF---------LTERQGG 173

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRL 261
           +D+ A   +     D  Y L G K+F  ++      ++LA+++G       +  FLVP  
Sbjct: 174 SDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSLFLVPWR 232

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            EDG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +A
Sbjct: 233 KEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPAKGFYYMMEALNLSRVCNA 292

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + SV  M+ +L EA  YA RR   G +L D P+++  +A++       T+  F +   FD
Sbjct: 293 VASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVREPLANLTARQEVETSACFDMIALFD 352

Query: 382 EAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R+
Sbjct: 353 RVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHEAIELHGGNGYIEDFVTPRLLRD 412

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE-------QDLGSSGKKVITILRD 489
           +   ++  G+ N + L+VL L+ K   + E+  + ++        ++    + V   L++
Sbjct: 413 AQVLTVWEGTANILALEVLRLMRK-YRIHERFITEMKGRLERLTAEVKPLARPVEEGLKE 471

Query: 490 SISLCKEDKGLARFL 504
            +S      G A  +
Sbjct: 472 LVSALAHLGGQADEV 486


>gi|118463683|ref|YP_879516.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773280|ref|ZP_05214796.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118164970|gb|ABK65867.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 589

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 136/533 (25%), Positives = 233/533 (43%), Gaps = 67/533 (12%)

Query: 32  IGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y +D  L   ++ +      ++  + L  +GE +    A+  A   + N P+L  
Sbjct: 32  VGLNWYDTDPTLQFTMSYYLQPDELALAERHLSRIGELMGGPVAR-WAEETDRNPPRLER 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR---AARLYLM 143
           Y   G    +V   P++    R  +          R+     R           A  YL+
Sbjct: 91  YDRWGHDISRVVMPPSFVQSKRAVLEA-------QRALRTEARAAKMSSSLPLFASNYLL 143

Query: 144 AQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            Q + G   +       +   VA      V +    K  S E+                 
Sbjct: 144 NQADIGMGCALGTGGGMVQSLVAAYAPADVREHVLAKFASGEWAGE-----------TAQ 192

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVG 254
            LTE+ GG+D+ A+ +   +  D  + L+G KWF S+   +AFI+LA+ EG       V 
Sbjct: 193 LLTERTGGSDLGALETTATRHGD-SWLLNGFKWFASNCAGEAFIVLAKPEGAPDNSRGVA 251

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL--------NVST 306
            FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL               
Sbjct: 252 NFLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTDGAASDGKGL 311

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G + ++     L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+
Sbjct: 312 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDV 371

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A+ F    + +  + R      A    P+TK   C++     ++A+E  GG+GYIE
Sbjct: 372 EAAQAMVFDGTGATNHRQPRGMRQRIA---VPVTKLRVCRLGITAASDAIEIHGGNGYIE 428

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
              +AR  R++  N+I  G  N + LDV   +E+                  + + ++  
Sbjct: 429 NWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQTR----------------AHETLLAR 472

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV--FLENRFLDN 537
           LRD++S+  +D+   R +  +I    +A   +      +A+   F   +F+ +
Sbjct: 473 LRDAVSVADDDEA-TRLVAGRIEDLDAAITAWGKLDKPLAEARLFALAQFMGD 524


>gi|293608467|ref|ZP_06690770.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829040|gb|EFF87402.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 384

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAMKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQIIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|332977280|gb|EGK14071.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 388

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 151/406 (37%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+       + A           P   +WD+  + P    +++++   G      + 
Sbjct: 2   DFALTEEQLAYQQTARQFA--QKELKPNAAQWDRDSYFPV--DVIKKTGELGFLGLYTNP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            ++ +   +                    +S       M+       V  +  PK+ S E
Sbjct: 58  DYDGLGLPRLDSAIVFEELAWGDTAVAAYISIHNMVTWMIGEYAKDDVRAEIVPKLVSGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D  ++T++  K   +  Y LSG K F+S   S 
Sbjct: 118 -------------LLSSYCLTEPNAGSDAGSLTTKAVKKDGEDYYLLSGEKTFISGAGST 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG- 300
             +++    G  G   V   + D    G+ Y + ++K+G ++  T  + F +        
Sbjct: 165 DILVVMARTGNAGPKGVSAFVVDAHSEGISYGKNEHKMGWKAQPTRTIHFKDVKVPARNL 224

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             N   G    MK L    ++  I +V   + +L  A++Y + R   G  + +   ++  
Sbjct: 225 MGNEGEGFKFAMKGLDGGRINIGICAVGTAQAALETALNYVQERKQFGSAIAELQSVQFK 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+     AA  + +  AN  D+  S       A     + K     ++ AV  EA++ 
Sbjct: 285 LADMLTQTIAARQMLYLAANKVDKKHSD------ATTYCAMAKRLATDLSFAVANEALQL 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GG GY+ E  + RH R+   + IL G+   M + V   + +   L
Sbjct: 339 HGGYGYLNEYPLERHVRDLRVHQILEGTNEIMRVIVSRSMMRDGAL 384


>gi|124009115|ref|ZP_01693798.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123985329|gb|EAY25249.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 384

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 78/387 (20%), Positives = 159/387 (41%), Gaps = 38/387 (9%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +  +    GL   +    +        +K   A +  ++
Sbjct: 26  KHIRPYMMDWDETQAFP--REIFTQMGELGLMGMLVPEQYSGSG--FGYKEYVAAIVAVS 81

Query: 145 QLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           ++++   +S +       + +    +    K W PK+ + E+                 G
Sbjct: 82  KIDSSIGLSMAAHNSLCTNHILQFASEEQKKRWLPKLATGEW-------------IGAWG 128

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPR 260
           LTE   G+D   + +      +  + L+G K F++  +S    +++A+            
Sbjct: 129 LTEPNTGSDAGNMRTTAVLDGNE-WVLNGAKNFITHGISGNIAVVVARTGEPNESGNASA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLD 319
            + +    G    + +NK+G R++ T E+ F N     +   N+     +  +  L  LD
Sbjct: 188 FVVERGTMGFAGGKKENKLGMRASETAEMIFDNCR---IPKENILGNVGDGFRQALAILD 244

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +S+S + + +AE     A+ YA+ R   G  + +   +   +AD+A +I AA  L+ 
Sbjct: 245 GGRISISALSIGIAEGAYEAALQYAKERQQFGQSIANFQGISFKLADMATEIDAAKLLTE 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R ++  D  K   +E+A A       KY+  ++A  V  EA++  GG GY+++  + + Y
Sbjct: 305 RASDLKDAGKKVGKESAMA-------KYYSSEVAVRVSNEAVQIFGGYGYVKDFPVEKFY 357

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+S   +I  G+     + +   + KG
Sbjct: 358 RDSKLCTIGEGTSEIQKVVISRAILKG 384


>gi|256028604|ref|ZP_05442438.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D11]
 gi|289766521|ref|ZP_06525899.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|289718076|gb|EFD82088.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 377

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 146/375 (38%), Gaps = 34/375 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
            D+    P    ++ +         I  R +        ++ I    +          L 
Sbjct: 29  VDETNCIP--QDIIEKLAKYQFISPIVPREYGGAGADYVSYAIIMEEISRRCASTGTFLT 86

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    T    +++   + + E                  GLTE   G+D  
Sbjct: 87  AGASLAALPLLNFGTETQKQNYLKPLATGE-------------KIGCFGLTEPGAGSDAG 133

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A T+      D  Y L+G K F+++ P++D  I+ A  +   G   +   + D +  G  
Sbjct: 134 ASTTTAVLDGD-YYILNGRKCFITNAPIADFAIISAMTDRTKGTKGISTFIVDSTLEGWS 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRV 330
               +NK+G R + T ++   N         N+     +  KI++  LD+  + V+   +
Sbjct: 193 VGAHENKMGIRGSITSDIVLDNVKVP---KENLLGDKGKGFKIMLNTLDAGRIGVAAQAL 249

Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A     EAI Y + R   G  L      +  IA++A  + AA  L +  A   DE K+
Sbjct: 250 GIAQGALDEAIKYVKERVQFGRKLAAFQNTQFKIAEMATKVEAARLLVYDAAKIKDEGKN 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +++ A       KY+  ++A  V   A++  GG GYI++  I R YR++   SI  G
Sbjct: 310 PGLKSSMA-------KYYAAEIANEVAYWALQLHGGYGYIKDYPIERIYRDARITSIYEG 362

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   + K
Sbjct: 363 TSQVQQMVIAGHILK 377


>gi|260557138|ref|ZP_05829354.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|260409244|gb|EEX02546.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
          Length = 593

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 90/517 (17%), Positives = 192/517 (37%), Gaps = 58/517 (11%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRS 110
            +++L  +         +E+A+ A   T  L       G R++  +V     +    R+ 
Sbjct: 27  ANEKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   ++   +   
Sbjct: 87  AEGGWIGLGADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALSSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++   +D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATDRLQGRSATGVQSPSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRD 433

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +  
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
             E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 493 ATEIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|307323559|ref|ZP_07602769.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306891048|gb|EFN22024.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 375

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 131/373 (35%), Gaps = 19/373 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH       +          +        A   +
Sbjct: 16  PFAAEVDEEARFP--QEALDALVANDLHAVHVPEPYGGAGADALATVIVIEEVARACASS 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +              AP+ K        L+E   G
Sbjct: 74  SLIPAVNKLGSLPVILSGSEELKKKYL-------------APLAKGDAMFSYCLSEPDAG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +    
Sbjct: 121 SDAAGMKTKAVRDGDFYVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKGDP 180

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 181 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 240

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A   +   +
Sbjct: 241 GIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKLEAARQLTYAAAAKSERVFA 300

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A   K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 301 GGGKEDLTFFGAA-AKCYASDAAMEITTDAVQLLGGYGYTRDYPLERMMRDAKITQIYEG 359

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 360 TNQVQRIVMARNL 372


>gi|293332891|ref|NP_001168588.1| hypothetical protein LOC100382372 [Zea mays]
 gi|223949393|gb|ACN28780.1| unknown [Zea mays]
          Length = 407

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 74/423 (17%), Positives = 141/423 (33%), Gaps = 27/423 (6%)

Query: 43  LVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           L AL+    P      L      +   T ++                P     D     P
Sbjct: 5   LPALLRRAAPGGGAARLFASSSLLFDDTQEQFKESVRKFA--QENIAPRAAAIDASNHFP 62

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSAS 160
               L R      LH       +  +      H I    +   +        + S    +
Sbjct: 63  RDVDLWRLMGDFNLHGLTAPEEYGGMGLGYMYHCISMEEITRASGAVGLSYGAHSNLCIN 122

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +P     + PK+ S E+                L ++E   G+D+ ++  + +K
Sbjct: 123 QLVRHGSPEQRLKYLPKLISGEH-------------IGALAMSEPNSGSDVVSMKCKAEK 169

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +  G        W  + P +   ++ A+ +   G   +   + +    G    +  +K+G
Sbjct: 170 VDGGYVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKLDKLG 229

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIH 337
            R + T EL F N F      L      V  M     L  L  A   +  M+  L   + 
Sbjct: 230 MRGSDTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLP 289

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K   ++        
Sbjct: 290 YVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKD-------C 342

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  + A  V  +A++C+GG+GYI E    R  R++    I  G+     + +   
Sbjct: 343 AGVILFAAENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGRE 402

Query: 458 LEK 460
           L K
Sbjct: 403 LFK 405


>gi|299537942|ref|ZP_07051228.1| protein aidB [Lysinibacillus fusiformis ZC1]
 gi|298726524|gb|EFI67113.1| protein aidB [Lysinibacillus fusiformis ZC1]
          Length = 555

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 115/533 (21%), Positives = 219/533 (41%), Gaps = 48/533 (9%)

Query: 35  NAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L  ++       F S   +EL   GE                  P+L  Y  
Sbjct: 13  NFFTEDDTLQKIVEMMLDKEFLSYAQRELTDFGELCAGDIDTRAKHTDRLGEPRLQRYDA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEISEVWVNDGYKKTIEETYNTGIVGYV-HKHIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +  + +A ++       V + + P + +       +             LTE++G
Sbjct: 132 FYCPVTLTMATAYLLDHYADEEVKQRFLPHVCATGDTDLYEGATF---------LTERQG 182

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPR 260
           G+D+ A   + +K     Y L G K+F  ++ M    ++LA++EG       +  F VP 
Sbjct: 183 GSDVGANVVEARKDG-TAYRLYGEKYFASNAGMCGVAMVLARIEGAPAGSKGLTLFAVPW 241

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
             EDG+ N L  +RLK+K+G R+  + E+EF     +++G+ N     + +   L  + +
Sbjct: 242 RKEDGTTNHLRIRRLKDKLGVRAVPSGEVEFDGALAYVVGEQNKGIYYMLEALNLSRICN 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S+  MR    EA HY   RH  G  L   P+++  +   A  +    A  F L   +
Sbjct: 302 AVASIGIMRRGFLEAKHYVTNRHAFGKPLTQYPMIQDTLGKFAAKLHVEVATVFDLIQLY 361

Query: 381 DE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D+    +   +E    R+   I K    + A    +EA+E  GG+GYIE+    R  R++
Sbjct: 362 DKVTSGQGTQQELIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDA 421

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSIS---- 492
              ++  G+ N + L+++ L++K  +  E     +E+ L   +   ++ I+++ ++    
Sbjct: 422 QVLTVWEGTANILALELIRLVDK-FHAHELFVCEMEERLEKLADSSLVQIVKEQLANISM 480

Query: 493 --------LCKEDKGLARFLTEKIALASSAAALYRAGM------NDIADVFLE 531
                           A+ + EK+A    +                +ADV+LE
Sbjct: 481 KLQIFSALDAATKTFEAKGMAEKMAHLYESVIAVEWAHKFGGKYEKLADVYLE 533


>gi|297616478|ref|YP_003701637.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144315|gb|ADI01072.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 388

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 119/373 (31%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P      ++    GL        +                   A    
Sbjct: 32  PIAAEIDREHRFPM--ETFKKLADLGLTGIPIPEEWGGAGGTYLDFAMFIEELAKACAST 89

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +M+       M   L  T +  + +   + + E             +     LTE   
Sbjct: 90  AVIMAVHTGLGCMSTYLYGTEKAKQKYLRALATGE-------------IIGAYALTEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D A+I  + +   D         +  +   +  +    + +  +     +  L+ +  
Sbjct: 137 GSDAASIRCRAEDAGDHFIVNGSKIFITNGGYATTYCTFVKTDPSQPPGKGITCLIIEKD 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G   + T EL F N       +LG++N        +     +  A  
Sbjct: 197 TPGFSISKPVEKMGMNGSPTCELYFDNVKVPKENVLGEVNNGFEVAMGLLDGGRITIAAQ 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +L   ++Y + R   G  L     ++  +AD+A  + AA  L +R A   D  
Sbjct: 257 GLGIGEGALEYTVNYIKERKQFGRPLAANQGVQFMVADMATALEAAQLLVYRAAWLKDNK 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S+EA+ A+        +    +  V    ++ +GG GY +E  + R  R+     I 
Sbjct: 317 LPHSKEASMAKK-------FATDTSMEVCTNCVQLMGGYGYCKEFPVERMMRDVKVTQIY 369

Query: 444 LGSGNAMVLDVLN 456
            GS     + +  
Sbjct: 370 EGSNQIQRMIIGR 382


>gi|257464196|ref|ZP_05628576.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D12]
 gi|317061715|ref|ZP_07926200.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313687391|gb|EFS24226.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 377

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 140/374 (37%), Gaps = 28/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           E  D+    P    ++ +         I  + +        ++ I    +          
Sbjct: 27  EHVDETGCIP--KDIMEKLARYQFISPIIPKEYGGAGADYVSYAIIMEEISKRCASTGTF 84

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +   A  +    T    + +               P+         GLTE   G+D
Sbjct: 85  ITAGASLVALPLLNFGTEIQKQKYLK-------------PLALGEKIGCFGLTEPGAGSD 131

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A+ T+  +   D  Y L+G K F+++ P++D  I+ A  +   G   +   + D +  G
Sbjct: 132 AASGTTTARWEGDH-YVLNGRKCFITNAPIADFAIISAMTDRTKGVKGISVFIVDANTEG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVS 326
                 +NK+G R   T ++   N        L+V     + M   +    +  A  ++ 
Sbjct: 191 WSVGAHENKMGIRGTITSDIVLDNVKVPKENLLDVEGKGFKIMMNTLDYGRIGVAAQALG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L EAI Y + R   G  L      +  IA++A  + AA  L +  A   DE    
Sbjct: 251 IAQGALDEAIKYVKERKQFGKPLSKFQNTQFKIAELATKVQAARLLVYDAAKIKDEGGKP 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +++ A       KY+  ++A  V   A++  GG GYI++  I R YR++   SI  G+
Sbjct: 311 GLQSSMA-------KYYAAEIANEVAYWALQLHGGYGYIKDYPIERMYRDARITSIYEGT 363

Query: 447 GNAMVLDVLNLLEK 460
                + +   L K
Sbjct: 364 SQIQQMVIAGYLLK 377


>gi|197099871|ref|NP_001124722.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Pongo abelii]
 gi|75062038|sp|Q5RF40|ACDSB_PONAB RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|55725671|emb|CAH89617.1| hypothetical protein [Pongo abelii]
          Length = 432

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 136/369 (36%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTLIRKHGTEEQKGTYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N         N+        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVPET---NILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 308 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 368 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 421 LNTIAKHID 429


>gi|320158804|ref|YP_004191182.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
 gi|319934116|gb|ADV88979.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
          Length = 384

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 131/373 (35%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +F P    +L+ +   G            +   +           M     
Sbjct: 26  PNAAVWDETQFFPV--EVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       MV    T  V   +   + S              ++     LTE   G
Sbjct: 84  TAFMTIHNMVNWMVGSFATQEVKSLYCQGLNSG-------------TLLGSYCLTEPNSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ +   +  D         +   +  +   +++A+  G  G   V   +      
Sbjct: 131 SDAASLKTTATRQGDEYRINGAKAFISGAGETQVLVVMARTGGE-GAKGVSAFVVPADAQ 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N    L   L     G    MK L    ++ A  SV
Sbjct: 190 GVSYGRKEPKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  L +   ++  +AD+A ++ AA  L    A+  D+   
Sbjct: 250 GTAQQALNLATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFAASKLDKGDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G
Sbjct: 310 D------ATAYCAMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M L V   L
Sbjct: 364 TNEIMRLIVARRL 376


>gi|70730430|ref|YP_260171.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68344729|gb|AAY92335.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 375

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 131/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     +      G    +    +          + A           
Sbjct: 24  PFAADWDREHRFP--KEAIAEMAELGFFGMLVPEQWGGCDTGYLAYVMALEEVAAGDGAC 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + +       P+   ++     LTE + G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGNDDQKERFLKPLASGAMLGAFALTEPQAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +++ ++ ++  D        ++  S   +   I+ A  +   G   +   +      
Sbjct: 130 SDASSLKTRARRDGDHYVLNGCKQFITSGQNAGVVIVFAVTDPAAGKRGISAFIVPTDSP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSV 325
           G    R+++K+G  ++ T ++ F +    L   L     G    +  L    +  A  SV
Sbjct: 190 GYKVARIEDKLGQHASDTCQILFEDVKVPLANRLGEEGEGYKIALANLEGGRVGIASQSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +   A  YAR R   G  +I+   +   +AD+A  IA A  +    A   D  K 
Sbjct: 250 GMARAAFEAARDYARERETFGKPIIEHQAVAFRLADMATQIAVARQMVHYAAALRDSGKP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  G
Sbjct: 310 ALVEASMA-------KLFASEMAEKVCSAALQTLGGYGYLSDFPVERIYRDVRICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   + +   L
Sbjct: 363 TSDIQRMVISRNL 375


>gi|38505142|gb|AAR23112.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans]
 gi|40388398|gb|AAR85469.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans]
          Length = 430

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 141/374 (37%), Gaps = 20/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D     PA   + ++  + G      D  +  +    QAH +    +   +   A 
Sbjct: 69  AARTDAQNEFPA--EMWKKLGNAGFLGVTADEEYGGLGMGYQAHCVVMEEISRASGSIAL 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  TP     + P + S E                 L ++E   G+
Sbjct: 127 SYAAHSQLCVNQLSLNGTPEQKARFLPGLLSGE-------------KIGALAMSEHSAGS 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  +++  G        W  + P +D  ++ A+ E   G   +   + + +  G
Sbjct: 174 DVVSMKTSAKEVDGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGITAFVVEKTFKG 233

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG++N     + +   L  L  +   + 
Sbjct: 234 FSCARKLDKLGMRGSNTGELIFEDVFVPRENLLGEVNRGVKVLMEGLDLERLVLSAGPLG 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D   S 
Sbjct: 294 IMQAALDLVLPYTHVRKQFGAPIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASL 353

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              AA           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 354 G-SAAIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 412

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 413 SEIRRMVIGRAFNK 426


>gi|226355911|ref|YP_002785651.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317901|gb|ACO45897.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 378

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 143/396 (36%), Gaps = 30/396 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q+LAR             P    +D+ E  P    ++ ++   GL           +
Sbjct: 10  RQLQQLARDFAR-----REIIPIAAEYDQKEELP--WQVVEKAFEVGLLNPTIPEHAGGL 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 +           +    ++  S    + + +  T    + +             
Sbjct: 63  GLGMFDECLIGEELAYGCMGIYTVLMASELGIAPLLIGGTEEQQQRFL------------ 110

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+ + +      L+E   G+D AA+ +      D         W  +  +++  ++ A
Sbjct: 111 -GPLTEKAGLAAFALSEPNNGSDAAAMHTTAVLDGDEWVLNGTKMWISNGGLAEITVVFA 169

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVST 306
             + + G      L+      G  Y ++K+K+G R++ T EL F N        L  +  
Sbjct: 170 TTDRQGGHKATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLGD 229

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    +  A  SV   R ++ E++ YA+ R   G  +     ++  +A++A+
Sbjct: 230 GFKIAMKTLDKTRIPVAAGSVGIARRAMDESVKYAKEREAFGKPIAQFQAIQFKLAEMAM 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I     +  + A   D+ +    E+A       I K +C +MA     EA++  GG GY
Sbjct: 290 GIETGRLMYQKAAWLVDQGQPHGYESA-------IAKAYCSEMAFDAANEAIQVHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E  + +  R+   N I  G+     + +   L +
Sbjct: 343 VGEYPVEKLLRDVKLNQIYEGTNEIQRVVISRHLLR 378


>gi|308497222|ref|XP_003110798.1| CRE-ACDH-11 protein [Caenorhabditis remanei]
 gi|308242678|gb|EFO86630.1| CRE-ACDH-11 protein [Caenorhabditis remanei]
          Length = 640

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 118/569 (20%), Positives = 226/569 (39%), Gaps = 66/569 (11%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           + +     + P     N Y  D +L  ++           V  +L   G+ + S   + L
Sbjct: 30  AKTGGFSQEAPTL--HNPYRDDPILDRVLRRLLPESQYVKVSADLTKFGDRITS-EIEHL 86

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R A    P+L      G+R DK+     W  L +    +G+    ++   +P VR+   
Sbjct: 87  GRQAELEQPRLEHQDAWGKRIDKLVVCNEWQKLKQICAEEGVISIGYENDVDPFVRR--- 143

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             + A+L+L +          ++T  ++  L          +     + E     ++   
Sbjct: 144 IHQVAKLFLFSPSAGLVSCPMAMTDGAVKTLTVGILYSLNLYGKHKLATEAVDRLRSRDP 203

Query: 193 KTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
            ++   G  +TEK+GG+D+A    +   +I +  Y L+G+KWF S+  +D  + LA++  
Sbjct: 204 TSAWTSGQWMTEKKGGSDVAGGCDTYAVQIENDTYRLNGYKWFSSAIDADVALTLARIVD 263

Query: 250 -EGRV--GCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +G    G   +   L     ++G+ NG+   RLKNK+G +   T EL         +G+
Sbjct: 264 SDGNAVEGSRGLSLFLLRIRDDNGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGE 323

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRV---------------SLAEAIHYARRRHVSG 346
                  + +M  +  + +A+ S+  MR                 ++ A  Y+ +R V G
Sbjct: 324 PGRGVAGISNMLNITRIHNAVASLGYMRRFPALFSFLFKCSFSRIISLARDYSTKRVVFG 383

Query: 347 GILIDQ---PVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPIT 400
              +     P+    +A + ++   +  L F  A      +  KS   +A   R++ P+ 
Sbjct: 384 QTQVKYSKWPLHTTTLAKMEVETRGSMLLLFESARLLGLSEAGKSSDVDAMMLRLITPVL 443

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  K A  +++E +EC GG GY+E+  +    R++    I  G+ N + LDVL +   
Sbjct: 444 KLYAGKQAVPLVSEGIECFGGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSG 503

Query: 461 GTNLFEQLFSTLEQDLG-----------------SSGKKVITILRDSISLCKEDKGL--- 500
             N+       + Q L                  S+ K++  +L  +     + +     
Sbjct: 504 KENILLAFGKRVSQLLSNTKSEEPRLQKSKESIESALKELQKLLVKASDSAVQGETRIDT 563

Query: 501 -ARFLTEKIALASSAAALYRAGMND-IAD 527
            AR ++  IA   S A L     +  +A+
Sbjct: 564 VARHISFAIARIYSGALLIDHASDSTVAN 592


>gi|320010418|gb|ADW05268.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 385

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 130/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       +          +            +
Sbjct: 33  PHAAAVDEEARFP--QEALDALVASDLHAVHVPEEYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEDLKKKYL-------------GPLAKGDAMFSYALSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++  S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGESEYYTVMAVTDPEKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A     AKS
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKLEAARQLTYSAA-----AKS 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A   K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 313 ERVDGDLTFFGAA-AKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|322368778|ref|ZP_08043345.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320551509|gb|EFW93156.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 384

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 140/379 (36%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +D+ E +P    ++ ++   GL  +     +                        
Sbjct: 26  PIAKEYDQKEKYP--WEIIDKAAEMGLTGANIPIEYGGAGYSPLEVAIIVEELFAVDPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  ++ +      +    T    + +              AP+      +G  ++E   G
Sbjct: 84  GLCITSTAFGGDAIREFGTEEQKEKYL-------------APVAAGDAVMGTAISEPDTG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGS 266
           +D++++++  +K  D         W  +  + D F+++ + +           +++ +  
Sbjct: 131 SDVSSVSTTAEKDGDEWVINGNKMWITNGSIGDYFVVMTKTDPDADDRYAGFSQIIVESD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G    ++  K+G R++ T EL F +        +     G ++ M+         A  
Sbjct: 191 RDGFEADKITGKLGIRASDTAELIFDDVRVPEENLVGTRGMGFLQLMQFFDETRTAVAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +   A+ YA+ R   G  + D   ++  +A++     AA  L+++ A S    
Sbjct: 251 GVGIAKGACERALDYAQEREQFGRSISDFQAIQHKLAEMHTKTEAARNLTYKSAWSVANG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             +         +A + K +  ++A     EA++  GGSGY+ +  + R YR++    I 
Sbjct: 311 DGQ------LTQLASMAKEFSSRVAVECADEAVQIHGGSGYVNDFDVERLYRDAKITQIY 364

Query: 444 LGSGNAMVLDVLN-LLEKG 461
            G+       +   LL KG
Sbjct: 365 EGTTEIQKNIIARELLGKG 383


>gi|225718798|gb|ACO15245.1| Isovaleryl-CoA dehydrogenase, mitochondrial precursor [Caligus
           clemensi]
          Length = 458

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 127/376 (33%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK            +    GL     D  F  +      H I    +  ++   
Sbjct: 96  PHASEIDKENEFTKGKDFWLKLGEMGLLGITADPDFGGMGMGYFDHCIAMEEMSRVSGAI 155

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S EY                L ++E   
Sbjct: 156 ALSYGAHSNLCVNQINRNGNTEQKNKYLPKLCSGEYWG-------------ALAMSEPGS 202

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D+ ++ +   +  D         W  + P +D  ++ A+ + +       +   L + 
Sbjct: 203 GSDVVSMRTTAIEDGDHYVLNGSKFWITNGPDADVLVVYAKTDPKNPKPQHGITAFLIEK 262

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R + T EL F N       +LGDLN     +     L  L  A 
Sbjct: 263 GMPGFSTGPKLDKLGMRGSNTCELIFDNCRVPKENILGDLNKGVYVLMSGLDLERLVLAA 322

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA  R      +    +++  +AD+   + +  A  + +  + D+
Sbjct: 323 GPVGIMQSACDVAWSYAHERKQFSTPIGKFQLIQGKMADMYTTLNSCRAYLYNVGRACDK 382

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++              C + +  +  +A++ +GG+GYI +    R  R++    I
Sbjct: 383 GHVSPKD-------CAGVILHCAEKSTQMGLDAIQILGGNGYINDYPTGRFLRDAKLYEI 435

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 436 GAGTSEVRRMIIGRAL 451


>gi|226943853|ref|YP_002798926.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718780|gb|ACO77951.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 594

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 115/581 (19%), Positives = 214/581 (36%), Gaps = 73/581 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
               +N      +   L+ N   V     E L   ++    +E  R A+     L+A   
Sbjct: 7   PLEDLNF-----IFEHLLDNERLVALPGFEDLSTELIGAILEEAGRFASGVLAPLNATGD 61

Query: 89  PGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G RW   +V     +    R+ +  G +    ++ +       A  +    + + A  
Sbjct: 62  REGVRWSDGEVATPEGFKEAYRQYVESGWNNVAVEKEYGGQGLPYAVSMAIGEIMMAANK 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   ++ +   +    +P     + P + S  +  T             + LTE  
Sbjct: 122 SLVMCPGLTLGAIESLCAAASPEQKALYLPNLVSGRWSGT-------------MNLTEPD 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            G+D+ A+  +  + +DG Y L G K F+S    D       ++LA+          +  
Sbjct: 169 AGSDVGALRCKAIEQADGSYRLHGQKIFISYGEHDLTENIVHLVLARTPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           FLVP+ L +     G+ N +     ++K+G   + T  L + +     G+L+G+ N    
Sbjct: 229 FLVPKFLVNPDGSLGARNDVRCVSTEHKLGIHGSPTCVLAYGDREGATGYLVGEKNRGLQ 288

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI--LIDQPVMKRAIA 360
            +  M  +  L   +  V+    +  +A+ YAR R       SG    ++  P ++R + 
Sbjct: 289 AMFVMMNMARLIVGLEGVALSERAYQQALDYARERIQGVDALSGEPVAIVRHPDVRRMLL 348

Query: 361 DIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +   I A  ALS  +A + D A+       R    A+  ++ P+ K W  +    +   
Sbjct: 349 SMKSQIEAMRALSLVIAQAQDLAQRHADPEVRRRNQAFVELLTPVFKAWATENGIRLTQL 408

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL 472
            ++  GG G++EE   A+H R++    I  G+       L    L   G   F  L   +
Sbjct: 409 GVQIHGGMGFVEETGAAQHLRDAVIGVIYEGTTGIQAADLVGRKLARDGGAAFAALLRDM 468

Query: 473 EQ------------DLGSSGKKVITILRDS----ISLCKEDKGLARFL-TEKIALASSAA 515
                         D+GS     I  LR +    + L ++D   A  +    + LA + A
Sbjct: 469 SDVAEELQRHRDLGDIGSGLAGGIASLRQAGEHILPLYRDDAQAALAVSVPFLMLAGTVA 528

Query: 516 ALYRAGMNDIADV-FLENRFLDNCHSTHCMLHGRFNAAHII 555
             ++ G   +A    +E R          ++  RF  AH++
Sbjct: 529 GAWQHGRGALAAARLIEARGEPGAFLKGKLVSARFYVAHVL 569


>gi|107099980|ref|ZP_01363898.1| hypothetical protein PaerPA_01001001 [Pseudomonas aeruginosa PACS2]
          Length = 378

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 25  EAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VGAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 191 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMEQHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 311 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARAL 378


>gi|262066044|ref|ZP_06025656.1| acyl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
 gi|291380295|gb|EFE87813.1| acyl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693]
          Length = 378

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S  +   V +  +    +    
Sbjct: 52  ALEVPEEFGGPGLSRVDVAALIEEMAIADAGFATTISASGLAMKPVLIAGSHDQKQKMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +                       LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LVLEGG--------------LGAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  M+  + + A  +   G   +     +    GL   + ++K+G R++ T ++   +  
Sbjct: 157 NGEMASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGKHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G    MK L       A ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 VPASALLGKEGEGFAIAMKTLDQARSWIACIAVGIAQRGIQEAITYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLNLPYGKESA-------IAKCYAGDIAMEVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + + N
Sbjct: 330 SEAIQIFGGYGYSREYPVEKLLRDAKIFQIFEGTNEIQRIVIAN 373


>gi|41406322|ref|NP_959158.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394670|gb|AAS02541.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 589

 Score =  286 bits (732), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 133/530 (25%), Positives = 235/530 (44%), Gaps = 61/530 (11%)

Query: 32  IGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y +D  L   ++ +      ++  + L  +GE +    A+  A   + N P+L  
Sbjct: 32  VGLNWYDTDPTLQFTMSYYLRPDELALAERHLSRIGELMGGPVAR-WAEETDRNPPRLER 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    +V   P++    +R++ +       +     +          A  YL+ Q 
Sbjct: 91  YDRWGHDISRVVMPPSFVQ-SKRAVLEAQQALRTEARAAKMSSSLPL---FASNYLLNQA 146

Query: 147 EAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           + G   +       +   VA      V +    K  S E+                  LT
Sbjct: 147 DIGMGCALGTGGGMVQSLVAAYAPADVREHVLAKFASGEWAGE-----------TAQLLT 195

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  FL
Sbjct: 196 ERTGGSDLGALETTATRHGD-SWLLNGFKWFASNCAGEAFVVLAKPEGAPDNSRGVANFL 254

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL--------NVSTGPV 309
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL               G +
Sbjct: 255 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTDGAASDGKGLGRM 314

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            ++     L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+ AA
Sbjct: 315 MELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDVEAA 374

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+ F    + +  + R      A    P+TK   C++     ++A+E  GG+GYIE   
Sbjct: 375 QAMVFDGTGATNHRQPRGMRQRIA---VPVTKLRVCRLGITAASDAIEIHGGNGYIENWP 431

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +AR  R++  N+I  G  N + LDV   +E+                  + + ++  LRD
Sbjct: 432 VARLLRDAQVNTIWEGPDNILCLDVRRGIEQTR----------------AHETLLARLRD 475

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV--FLENRFLDN 537
           ++S+  +D+   R +  +I    +A   +      +A+   F   +F+ +
Sbjct: 476 AVSVADDDEA-TRLVAGRIEDLDAAITAWGKLDKPLAEARLFALAQFMGD 524


>gi|254465242|ref|ZP_05078653.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
 gi|206686150|gb|EDZ46632.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
          Length = 593

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 104/531 (19%), Positives = 194/531 (36%), Gaps = 77/531 (14%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRS 123
               +E  ++A+     L+      G R +  V + P  +     +    G         
Sbjct: 38  GAVLEEAGKIASEVLHPLNVVGDQEGCRLENGVVYTPKGFKDAFEQVKEGGWPGIDMPEE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F                +  A          +  +AS +    T      + P + S ++
Sbjct: 98  FGGQNMPYVIGTAVGEFFSAANQAFTMYQGLTHGAASAILAHGTDEQKATYLPNMVSCQW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +  +DG + +SG K F+SS   D  
Sbjct: 158 TGT-------------MNLTEPHCGTDLGLMRTKAEPQADGSFRISGQKIFISSGDHDMA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++ G       V  F+VP+ L +     G  NG+   +++ K+G   N+T 
Sbjct: 205 ENIVHLVLAKIPGGPEGIKGVSLFIVPKFLVNEDGSLGERNGVSVGKIEEKMGIHGNSTC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLG+ +     +  M     +   +  ++    +   A+ YA+ R   G 
Sbjct: 265 VMNYDGAVGYLLGEEHKGMRAMFTMMNEARVGVGMQGLAQAEAAYQNALEYAKDRLQ-GR 323

Query: 348 -------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--Y 392
                         LI  P ++R++ D       A A     A   D+A    ++ A   
Sbjct: 324 DVTGAKNPDGPADPLIVHPDIRRSLMDQKSFAEGARAFLLWGATLIDQAHRAGDKDADGL 383

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +M P+ K +       +  +A +  GG GYIEE  ++++ R++    I  G+     L
Sbjct: 384 ISLMTPVIKGFLTDQGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQAL 443

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIALA 511
           D++                  + LG   GK V+       S C+E+K ++   T+     
Sbjct: 444 DLVG-----------------RKLGQHGGKYVLAFFDMVKSFCQENKDISEDYTKDFIKP 486

Query: 512 SSAAA--LYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
             AA+  L  AGM      F++          +  L G ++  H+   + L
Sbjct: 487 LQAASKDLQAAGM-----FFMQT----GMKDPNQALAGSYDFMHLFGHVCL 528


>gi|121713100|ref|XP_001274161.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus
           NRRL 1]
 gi|119402314|gb|EAW12735.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus
           NRRL 1]
          Length = 428

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 81/428 (18%), Positives = 153/428 (35%), Gaps = 37/428 (8%)

Query: 41  SLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
             + +L    P         EL  L E V   T +E+                   R D 
Sbjct: 26  PAIRSLATKHPKGFVPPTEDELLELRERVQDFTRREIPEEV-------------AARTDT 72

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPS 155
               PA   + ++    G      +  +  +    QAH I    L   +   A    + S
Sbjct: 73  QNEFPA--EMWKKLGDAGFLGITANEEYGGLGMGYQAHCIVMEELSRASGSIALSYAAHS 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
               + ++L  TP     + P + +                   L ++E   G+D+ ++ 
Sbjct: 131 QLCVNQLSLNGTPDQKARFLPGLLAG-------------DKIGALAMSEHSAGSDVVSMK 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           +  + +  G        W  + P +D  ++ A+ E   G   +   + + +  G    R 
Sbjct: 178 TTAKAVDGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGMSAFIVEKTTEGFSCARK 237

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G R + T EL F N F     LLG+LN     + +   L  L  +   +  M+ +L
Sbjct: 238 LDKLGMRGSNTGELVFDNVFVPKENLLGELNKGVRVLMEGLDLERLVLSAGPLGIMQAAL 297

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D + S + E + 
Sbjct: 298 DLVLPYTHTRKQFGIPIAHNQLIQGKLADMYTKLAASRAYTYATARHIDNSASLA-EVSI 356

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                     +  + A     +A++ +GG+GYI E    R  R++    I  G+     +
Sbjct: 357 RTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRM 416

Query: 453 DVLNLLEK 460
            +     K
Sbjct: 417 VIGRAFNK 424


>gi|108800992|ref|YP_641189.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870133|ref|YP_940085.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436829|ref|YP_001072520.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771411|gb|ABG10133.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696222|gb|ABL93295.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236629|gb|ABO00030.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 582

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 150/561 (26%), Positives = 233/561 (41%), Gaps = 67/561 (11%)

Query: 32  IGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y++D  L   +A +       V    L  +GE +    A+  A   + N P+L  
Sbjct: 24  VGLNWYTTDPTLQFTLAYYVPPDQLPVAETHLTRIGELMGGAVAR-WAEETDRNPPRLER 82

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    +V   P++ A  R      L      R        ++     A  YL+ Q 
Sbjct: 83  YDKWGHDVSRVVMPPSFTAAKRAV----LDAQQALRDDMRAAGGRSSIPMFAANYLLNQA 138

Query: 147 EA---GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +      L +     A++VA      V      K  S E+                  LT
Sbjct: 139 DIGLGCALGTGGGMVAALVAAYAPADVRDHVLAKFESGEWAGE-----------TAQMLT 187

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L G KWF S+   +AF++LA+ EG       V  FL
Sbjct: 188 ERTGGSDLGALETTATRRGDA-WRLDGFKWFASNCDGEAFVVLAKPEGAPDSGRGVASFL 246

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGP 308
           V R   DGS NG+  +RLKNK+G RS A+ E+EF +   FLL                G 
Sbjct: 247 VLRTRRDGSRNGVRIRRLKNKLGTRSVASGEVEFVDAEAFLLSGEPSTEAGPSDGKGLGR 306

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + ++     L  A+ +V   R +L E++ YAR RH  G  LID+P+M+R +A++ +D+ A
Sbjct: 307 MMELTNAARLGIALFAVGNARRALVESLTYARNRHAFGSALIDKPLMRRKLAEMIVDVEA 366

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL F      +  + R      A    P+TK   C++     ++A+E  GG+GYIE+ 
Sbjct: 367 AQALVFDCTGLANHRQPRRVRQRIA---VPVTKLKVCRLGITAASDAVEIHGGNGYIEDW 423

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL- 487
            +AR  R++  N+I  G  N + LDV   + +  +  EQL S L   +  S  +  T L 
Sbjct: 424 PVARLLRDAQVNTIWEGPDNILCLDVARGIRR-AHAHEQLLSRLHDAVSVSDDEATTALV 482

Query: 488 ---RDSISLCKEDK-------GLARF--LTEKIALASSAAALYRAGMNDIADVFLENRFL 535
               D +                AR   L + +A   + A L      + A+        
Sbjct: 483 SRRVDDLDAAITAWTKLHGAVAEARLFPLAQFMADVYAGALLTEQAAWERAE-------- 534

Query: 536 DNCHSTHCMLHGRFNAAHIID 556
                    L  R  A   +D
Sbjct: 535 --RGGERKALVARLYARRYLD 553


>gi|148658395|ref|YP_001278600.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148570505|gb|ABQ92650.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 558

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 124/531 (23%), Positives = 210/531 (39%), Gaps = 45/531 (8%)

Query: 26  NQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
            QPP     N Y+ D +L      AL  +  + V  +L  +GE         L      N
Sbjct: 7   QQPPSLG--NQYTDDRVLRSFLRRALPRDVLAQVEPDLTTMGELAGG-ELYRLHLADRLN 63

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  +   GER D +E  P W    R +   GL    ++R++    R     ++ A +
Sbjct: 64  EPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGVFSR----IVQFALV 119

Query: 141 YLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           YL       +      S  +A  +       +     P++ SR+ D              
Sbjct: 120 YLFHPSTDVYTCPLAMSDGAARTLVEAGDATLIDRALPRLISRDPD---------RCWTS 170

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------R 252
           G  +TE  GG+D++   +  +   DG++ L G KWF S+      + LA+ +G       
Sbjct: 171 GQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATTGQMALALARPDGNPPGSRG 230

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  F +    ++G   G+   RLK+K+G R   T EL    T   L+G  N     +  M
Sbjct: 231 LALFYIELRDDEGRLQGIRVNRLKDKLGTRKVPTAELSLEGTPARLVGAPNGGVRAIVPM 290

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             +  + +++ + S MR  +A A  YARRR      L  QP+    +A +  +   A  L
Sbjct: 291 LQVTRIWNSVSAASFMRRGIALARDYARRRVAFDAPLNRQPLHTETLATLQAEFEGAFHL 350

Query: 373 SFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           SF  A      +   +   +    R++  ITK    + A  V++E +E  GG+GY+E+  
Sbjct: 351 SFLTAGLLGAEETGVADERQRHLLRVLTSITKLTTGRQAVDVMSEVIEAFGGAGYVEDTG 410

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLFSTL-EQDLGSSGKK 482
           +    R++    I  G+ N + LD L  L +        +L ++L + + +  L  +   
Sbjct: 411 LPTLLRDAHVLPIWEGTTNVLALDTLRALAQPGTWEAILSLADELMAGVNDASLARASVH 470

Query: 483 VITILRDSISLCKEDKGLAR--FLTEKIALA----SSAAALYRAGMNDIAD 527
             T L  +     E +  AR      ++AL        A L       + +
Sbjct: 471 ARTALDHARRWFGEARDRARLERGARRLALTIGRSLELALLISHATWSLTE 521


>gi|296449145|ref|ZP_06890932.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296261964|gb|EFH08772.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
          Length = 381

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 144/374 (38%), Gaps = 34/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK    P    L+++        S     +        ++ I    +       A  + +
Sbjct: 34  DKTGVMP--KELIKKLADAKFISSNIPEEYGGGGAGYVSYAIVMEEIARRCASTATFVTA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  ++  +    T    + +   I + E             +    GLTE   G+D A 
Sbjct: 92  GSSLASLPILYNGTEEQKQKYLKGIATGE-------------LIGAFGLTEPGAGSDAAG 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +  + + D  Y L+G K F+++    D  I++A  +   G       + +   +G   
Sbjct: 139 QQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGTSAFIVESKWDGFST 197

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVS 326
              ++K+G R   T +L F N         N+     +  KI +       +  A +++ 
Sbjct: 198 GAHEDKMGIRGTETSDLIFENVKVP---KENLLGKEGQGFKIAMGTLEVGRIGVAALALG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L EA+ Y ++R   G  +      +  IAD+   + AA  L +  A   D     
Sbjct: 255 IAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARGLVYDAAQKRDAGMRV 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++E+A A       KY+  ++A  V  +A++  GG G+I++  I R YR++   SI  G+
Sbjct: 315 AQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIERMYRDARIVSIYEGT 367

Query: 447 GNAMVLDVLNLLEK 460
                + + + + K
Sbjct: 368 SEVQKMVISSNVLK 381


>gi|226952229|ref|ZP_03822693.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226837067|gb|EEH69450.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 375

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 132/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P   A L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KAALAQMGQLGFMGMLVPEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGNDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AAI ++  K  D        ++  S   +   I+ A  +   G   +   L      
Sbjct: 130 SDAAAIKTRAVKDGDDYILNGAKQFITSGHNAGVIIVFAVTDPSAGKKGISAFLVPRDTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R++ K+G  ++ T ++  ++       +LG                 +  A  +V
Sbjct: 190 GYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLGKEGEGLKIALANLEGGRIGIAAQAV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA HYA+ R   G  + +   +   +A +A +I AA  L    A   +  + 
Sbjct: 250 GLARAALEEATHYAKERLTFGKPIFEHQAIAFRLASMATEIEAARQLVHYAARLKEAGQP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +M+  V + A++  GG GY+++  I R YR++    I  G
Sbjct: 310 CLNEASMA-------KLFASEMSERVCSSALQVFGGYGYLKDFPIERIYRDARICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   L
Sbjct: 363 TSDIQRLVIARSL 375


>gi|294629725|ref|ZP_06708285.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292833058|gb|EFF91407.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score =  286 bits (732), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 140/390 (35%), Gaps = 25/390 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ++ R A  +  +     P     D+    P     L   + + LH      S+       
Sbjct: 17  DMLRDAVRSLAE-AKIAPHAAAVDEEARFP--QEALDALVANDLHAVHVPESYGGAGADA 73

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              +            +  + + +   +  V L  +  + K +               P+
Sbjct: 74  LATVIVIEEVARVCASSSLIPAVNKLGSLPVILSGSEELKKKYM-------------TPL 120

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D A + ++  +  D        +W  ++ +S+ + ++A  + 
Sbjct: 121 AKGDGMFSYCLSEPDAGSDAAGMKTKAVRDGDHYVLNGVKRWITNAGVSEYYTVMAVTDP 180

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   + + S  G+ +   + K+G + + T E+   N        +    TG   
Sbjct: 181 AKRSRGISAFVVEKSDPGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFAT 240

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++   + +L  A  Y + R   G  + D   ++  +AD+A+ ++A
Sbjct: 241 AMKTLDHTRITIAAQALGIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLADMAMKVSA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL+++ A + +         A         K +   +A  V  +A++ +GG GY  + 
Sbjct: 301 ARALTYQAAAASERGD------ADLTYQGAAAKCFASDIAMEVTTDAVQLLGGYGYTRDY 354

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + +   L
Sbjct: 355 PVERMMRDAKITQIYEGTNQVQRIVMARNL 384


>gi|325286939|ref|YP_004262729.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324322393|gb|ADY29858.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 380

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 129/373 (34%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D   F       +++    G    + D  +          +               +
Sbjct: 30  ERDDAQRFP---KEEVKKMGELGFLGMMVDSKYGGSGLDTLSYVLVMEELSKVDASCSVI 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +S  +      +    T    + +  ++ + E                   L+E   G+D
Sbjct: 87  VSVNNSLVCWGLETFGTEEQKQKYLTRLTTGE-------------SIGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +      D         W  +   +D ++++AQ +   G   +  L+ +    G 
Sbjct: 134 ATSQKTTAIDKGDHYVLNGTKNWITNGSSADIYLVIAQTDIEKGHKGINALIVEKGAEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                +NK+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 194 EIGPKENKLGIRGSDTHSLIFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A+ Y+++R   G  + +   +   +AD+   I AA  L ++ A   D  ++  
Sbjct: 254 AAGAYELALKYSKQRKAFGTEIANHQAIAFKLADMHTSIEAARMLVYKAAMDKDNHENYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A       K +  K+A  V  EA++  GG+G++++  + R  R++    I  G+ 
Sbjct: 314 LSGAMA-------KLYASKVAMDVAVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   + +
Sbjct: 367 EIQKIVISRSILR 379


>gi|67537036|ref|XP_662292.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4]
 gi|40741540|gb|EAA60730.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4]
 gi|259482476|tpe|CBF76996.1| TPA: Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10)
           [Source:UniProtKB/TrEMBL;Acc:Q6T5L6] [Aspergillus
           nidulans FGSC A4]
          Length = 431

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 141/374 (37%), Gaps = 20/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D     PA   + ++  + G      D  +  +    QAH +    +   +   A 
Sbjct: 70  AARTDAQNEFPA--EMWKKLGNAGFLGVTADEEYGGLGMGYQAHCVVMEEISRASGSIAL 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  TP     + P + S E                 L ++E   G+
Sbjct: 128 SYAAHSQLCVNQLSLNGTPEQKARFLPGLLSGE-------------KIGALAMSEHSAGS 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  +++  G        W  + P +D  ++ A+ E   G   +   + + +  G
Sbjct: 175 DVVSMKTSAKEVDGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGITAFVVEKTFKG 234

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG++N     + +   L  L  +   + 
Sbjct: 235 FSCARKLDKLGMRGSNTGELIFEDVFVPRENLLGEVNRGVKVLMEGLDLERLVLSAGPLG 294

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D   S 
Sbjct: 295 IMQAALDLVLPYTHVRKQFGAPIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASL 354

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              AA           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 355 G-SAAIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 413

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 414 SEIRRMVIGRAFNK 427


>gi|145521412|ref|XP_001446561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414039|emb|CAK79164.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 77/404 (19%), Positives = 153/404 (37%), Gaps = 44/404 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S +  E+E L  +V    A+E+A +A+                D+    P    L R+  
Sbjct: 21  SNLSPEIEELRSHVTKFAAEEVAPLADKA--------------DEEGKFP--PHLWRKMG 64

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL---MTTP 168
             GL  +  D ++       ++      L  +++   G  +S S  SA  VA        
Sbjct: 65  DLGLLGATVDPAYGGSGL--SYSAHCMILEEISRASGGIGLSYSAHSALNVAQLQRHGNE 122

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K + PK+ S E+                L ++E   G+D+ ++ +  +K+ D     
Sbjct: 123 AQKKKYLPKLCSGEW-------------IGALAMSEPNAGSDVVSMKTTAKKVGDKYILN 169

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P++D  ++ A+ E       +   + +    G    +  +KIG +S+ T  
Sbjct: 170 GSKMWITNGPVADVIVVYAKTEPEKKQHGITAFIVEAGMKGFSRGKKLDKIGMKSSDTGP 229

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + F N       +LG++N     +        L  A   V  M+ +   +  Y   R   
Sbjct: 230 IYFDNVEVPAENVLGEVNKGVYVLMSGLDYERLVLAAGPVGLMQAAFDISREYCNTRQQF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +M+  +A++   + A+ A+ + ++ + D     + +            Y+  
Sbjct: 290 GKPIGQFQLMQGKLAEMYTTLQASRAMLYSVSRAVDAGNITNTD-------CAALIYYTS 342

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             A  V  EA++C+GG+GY +E  + R   ++    I  G+   
Sbjct: 343 VNATQVGLEAIQCLGGNGYTQEYPVGRIMNDAKLYEIGAGTTEI 386


>gi|23573437|gb|AAN38724.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 431

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 78/411 (18%), Positives = 139/411 (33%), Gaps = 40/411 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             ++ EL  L +      + ELA  AN    Q H         D+         L  R+ 
Sbjct: 57  PWMNAELLELRDLAAKFFSAELAPHANRFADQHH--------VDR--------ELWNRAG 100

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +    T  + 
Sbjct: 101 ELGLLCMSIPEEYGGGGGTFAHEAVVLEEQARIGDSSWGAGLHSGIVAHYILQYATEELR 160

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W PK+ S E                 + +TE   G+D+ ++ ++     D        
Sbjct: 161 AQWLPKMASGEM-------------IGAIAMTEPGTGSDLQSVKTKALLDGDEYVITGSK 207

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R   T EL F
Sbjct: 208 TFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRGQDTSELFF 267

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L      G ++ M  L    L  A+ +V+ M ++L + + Y R R   G 
Sbjct: 268 DEVRVPRSHLLGQAEGQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKYTREREAFGR 327

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A+ A +   A        +     +   +  A A+        W  + 
Sbjct: 328 PVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQTVAMAKW-------WTTER 380

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V+ + M+  GG GY+ E  I+R + +     I  G+   M   +   L
Sbjct: 381 AMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVMKEIISRSL 431


>gi|83858217|ref|ZP_00951739.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83853040|gb|EAP90892.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 378

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 146/379 (38%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM---AQ 145
           P   +WD+ +  P    +LR +   G    I+ R  E V      ++ AA ++       
Sbjct: 26  PHAAQWDEDKHFPV--DVLREAAEMGF-AGIYTR--EDVGGSAMSRVDAALIFEQLSRGC 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +S     + M+         + W P++              +        LTE 
Sbjct: 81  VSTAAFISIHNMVSWMIDSWGNDEQRQRWLPEMT-------------RMDKIASYCLTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D A + ++  +  D  Y L+G K F+S    SD + ++ +  G  G   +  ++ +
Sbjct: 128 GAGSDAANLRTKAVRDGDH-YVLNGSKAFISGAGTSDLYAVMCRT-GEDGPKGISTIIVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  S  T  + F +    +   +G+     G          ++  
Sbjct: 186 KDTPGLSFGANERKMGWNSQPTRVVTFEDCRVPVENRIGEEGQGFGFAMQGLNGGRINIG 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G   ++  A  YA+ R   G  + D    +  +AD+  ++ A+  +  R A+S D
Sbjct: 246 ACSLGGAAEAVDLATQYAKERSQFGRNIADFQATQFKLADMVTELDASRMMLLRAADSVD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A +   + K +   M   +  +A++  GG GY+++  + R  R+   + 
Sbjct: 306 RKDPS------AAMHCAMAKRFATDMGFKIANDALQIHGGYGYLKDYPLERIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           IL G+   M + +   + +
Sbjct: 360 ILEGTNEIMRVIIAKDVLR 378


>gi|23099150|ref|NP_692616.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22777378|dbj|BAC13651.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 380

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 140/377 (37%), Gaps = 31/377 (8%)

Query: 89  PGGERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           P     D K EF       +      GL    +   +        ++ +    +  +   
Sbjct: 26  PRAIEIDTKAEFPEDIFKQMG---ELGLLGLPFPEEYGGSGGDTVSYALAVEEIGRICGS 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                 +     AS +    T +   D+   + S E                  GLTE  
Sbjct: 83  TGLSYAAAVSLGASPIYYFGTEQQKLDFLKPLASGE-------------GLGAFGLTEPN 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE-GRVGCFLVPRLLED 264
            G+D     +  +   D  Y ++G K F+++     FI + A  E  + G   +  +L  
Sbjct: 130 AGSDSGGTKTTAKVDGDD-YIINGEKCFITNASYAKFITVTAVTEINKDGRNRISAILVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL      +K+G R + T E+  ++       LLG  +              +  A
Sbjct: 189 TDTPGLTITSNYDKMGVRGSDTAEIVLNDVRVPRSNLLGTEHKGHPQFLQTLDGGRISIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + V   + +L +A+ YA+ R   G  + +   ++  +AD+A+++  A  +  + A   D
Sbjct: 249 ALGVGIAQAALDKALAYAKERKQFGKSISNFQAIQFKLADMAMEVELARNMVLKAAWLKD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K+ S+EAAYA       K +  + A     +A++  GG GY+ E  + R+ R++    
Sbjct: 309 EGKNFSKEAAYA-------KLFATETATRSANQAIQIHGGYGYMREYEVERYLRDAKLLE 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 362 IGEGTSEIQRLVIARQL 378


>gi|213961958|ref|ZP_03390223.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno]
 gi|213955311|gb|EEB66628.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno]
          Length = 381

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 153/397 (38%), Gaps = 29/397 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q++   A  +  +     P    WD+ +  P    + R++   G    +    +    
Sbjct: 7   ETQQMVAEAAKDFAE-KYIRPHVMEWDESQEFPI--EVFRKAGELGFMGILVPEIYGGSA 63

Query: 129 RKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                +      +  +       + + +    + +         + W PK+ S E+    
Sbjct: 64  LDYHDYIAIVEEISKVDPSIGLSIAAHNSLCTNHILSFGNEEQKQRWLPKLASGEW---- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIML 246
                        G+TE   G+D   + +   K  D  + L+G K F++   S D  +++
Sbjct: 120 ---------IGAWGITEHNTGSDSGGMATTAVKDGDE-WVLNGTKNFITHGKSGDIAVVI 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+   +     +     +    G    + +NK+G R++ T E+ F +        L  V 
Sbjct: 170 ARTGEKGDKHGITAFAVERGTKGFSAGKKENKLGMRASETAEMIFQDCRIPDTNRLGAVG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G ++ MKIL    +    +S+   + +   ++ YA+ R   G  LID   +   +AD+A
Sbjct: 230 DGFIQAMKILDGGRISIGALSLGIAKGAYEASLKYAKERMQFGKRLIDLQAVGFKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I A+  L  + A   +  +  +   A A++       +  ++   V  EA++  GG G
Sbjct: 290 TEIEASELLLHKSAFQKNNGQRVTLSGAMAKM-------YSSEVCVRVATEAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y ++  + + +R+S   +I  G+     L +   ++K
Sbjct: 343 YTKDFPVEKFFRDSKLCTIGEGTTEIQKLVITRQIDK 379


>gi|316966600|gb|EFV51153.1| acyl-CoA dehydrogenase [Trichinella spiralis]
          Length = 539

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 155/404 (38%), Gaps = 18/404 (4%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           + LA + +    ++       +   +V            ++   +   ++   F  +   
Sbjct: 102 RNLAALTDLYPEEMALKDSVAKFCKEVVQPHVTKMDREATMEQTIIEGLFKNGFMGIGIP 161

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             +    A  ++   +         V +++ +       +      K F  E    +  P
Sbjct: 162 GEYGGHDASFFMTLLVIEEL---SKVDASTAIFCDVQNTLVNPMFIK-FGSESQKKHYLP 217

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           + ++ +     L+E + G+D  A+ +  ++            W  ++  +D F+++A  +
Sbjct: 218 LLESHMVGAFCLSEVQSGSDAFALKTFAKQDGTDFVINGTKMWITNAEHADIFLVMATTD 277

Query: 251 GRV----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLN 303
                  G   +     + +  G+   + ++K+G R+++T  +   N    +   +G + 
Sbjct: 278 PSKVVYTGYKGISCFAVERALAGVSVGKKEDKLGIRASSTCPVHLDNVRVPMSAVVGTIG 337

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                  ++     +  A   +   +  L   I Y + R   G  + D   M+  +AD+ 
Sbjct: 338 QGYKYAIEILNEGRIGIAAQMIGIAQGCLDRTIPYLKERKQFGRHIFDFQAMQHQVADMF 397

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  L++      +  ++  ++AA A       K +  +MA  V +  +E +GG G
Sbjct: 398 TELEAARLLTYNAGRLLETGQTVVKQAAMA-------KLYSSQMASKVTSRCIEWMGGVG 450

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +I++  + ++YR+    +I  G+ N  +  +  +++K T L  Q
Sbjct: 451 FIKDYPVEKYYRDCKIGAIYEGTSNIQLNTIAKIIDKHTGLANQ 494


>gi|255952857|ref|XP_002567181.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588892|emb|CAP95007.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 429

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 138/374 (36%), Gaps = 19/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D+    PA   + R+    G      +  +  +    QAH +    +   +     
Sbjct: 68  AARTDEQNEFPA--EMWRKMGDAGFLGVTANEEYGGLGMGYQAHCVVMEEISRASGSIGL 125

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  +    +   P + S E                 L ++E   G+
Sbjct: 126 SYAAHSQLCVNQLSLNGSTEQKERILPGLLSGE-------------KVGALAMSEHSAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  +++  G        W  + P +D  ++ A+ E  +G   +   L +    G
Sbjct: 173 DVVSMKTTAKEVDGGWLLNGTKMWITNGPDADYIVVYAKTEPELGSKGITAFLVEKDFKG 232

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG++N     + +   L  L  +   + 
Sbjct: 233 FSCARKLDKLGMRGSNTGELIFEDVFVPRENLLGEVNRGVRVLMEGLDLERLVLSAGPLG 292

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D A   
Sbjct: 293 IMQAALDLVLPYTHVRKQFGAPIAHNQLVQGKLADMYTKLAASRAYTYATARQVDNAAVE 352

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E             +  + A     +A++ +GGSGYI E    R  R++    I  G+
Sbjct: 353 PGELTVRTQDCAGAILYAAERATECTLDAIQLMGGSGYINEIPAGRLLRDAKLYEIGAGT 412

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 413 SEIRRMVIGRAFNK 426


>gi|254437740|ref|ZP_05051234.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198253186|gb|EDY77500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 591

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 102/543 (18%), Positives = 195/543 (35%), Gaps = 87/543 (16%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIH 112
             L          E  ++A+     L      G++         V     + A   +   
Sbjct: 30  ADLDRDFTDAVLSEAGKLASE---VLVPLNAVGDKQGCSLENGVVRTPDGFKAAYDKMSE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRV 170
            G         +        + +  A +  M        M P +T  ++  +    T   
Sbjct: 87  GGWMAMDLAEEYGGQGLP--YVMHTAAMEPMVSANMAFNMYPGLTHGNISAIVTHGTDAQ 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E+  T             + LTE   GTD+  + ++ +   DG Y +SG
Sbjct: 145 KAMYLPKMATGEWSGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKVSG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQR 274
            K ++S+   D       ++LA++ G       +  F+VP+ + +     G+ N L    
Sbjct: 192 QKIWISAGEHDLSENIIHLVLAKIPGGPDGVKGISLFIVPKFIVNADGSLGTRNALSCGG 251

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           L+ K+G   NAT  + +    G+L+G+++     +  M     L   +   +   V+   
Sbjct: 252 LEEKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMMNEARLGVGLQGYAQGAVAYEN 311

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ +AR R                  +I  P ++R + D    +  A AL++  A   D 
Sbjct: 312 ALGFARDRLQGRAVTGVEEPDKPADPIIVHPDVRRNLMDQKSFVEGARALTYWGATLMDR 371

Query: 383 AKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +    +E A A I  M P+ K +           A + +GGSG+  E  + +  R++   
Sbjct: 372 SHKNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTLGGSGFTREWGLEQFVRDARIT 431

Query: 441 SILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            I  G+     LD++   L   G       F  ++                  +   ++K
Sbjct: 432 MIYEGTNGIQALDLVGRKLGLNGGKTVMAFFEMIK------------------TYIADNK 473

Query: 499 GLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           G A F  + +  L +++  L  AGM           F+ N  + +  L G ++  H++  
Sbjct: 474 GDAAFEADFLEPLKAASKDLQAAGM----------YFMQNMKNPNDALSGSYDFMHMMGH 523

Query: 558 LYL 560
           + L
Sbjct: 524 VCL 526


>gi|313106966|ref|ZP_07793169.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879671|gb|EFQ38265.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 378

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 25  EAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 191 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMELHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 311 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARAL 378


>gi|242089359|ref|XP_002440512.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor]
 gi|241945797|gb|EES18942.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor]
          Length = 410

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 131/380 (34%), Gaps = 24/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
            A  P     D     P    L R      LH       +  +      H I    +   
Sbjct: 49  EAIAPHAAAIDASNHFPREVDLWRLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEITRA 108

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +     P     + PK+ S E+                L ++
Sbjct: 109 SGAVGLSYGAHSNLCINQLVRHGNPEQKLKYLPKLISGEH-------------IGALAMS 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K+  G        W  + P +   ++ A+ +   G   +   + 
Sbjct: 156 EPNSGSDVVSMKCKAEKVDGGYVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFII 215

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDS 320
           +    G    +  +K+G R + T EL F N F      L      V  M     L  L  
Sbjct: 216 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVL 275

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   
Sbjct: 276 AGGPIGLMQACLDVVLPYVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDC 335

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K   ++             +  + A  V  +A++C+GG+GYI E    R  R++   
Sbjct: 336 DNGKVDRKD-------CAGVILFAAENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLF 388

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 389 EIGAGTSEVRRMIIGRELFK 408


>gi|15806336|ref|NP_295042.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459067|gb|AAF10888.1|AE001978_8 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 398

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 149/415 (35%), Gaps = 33/415 (7%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
            +P+    +  L  E       Q+LAR             P    +D+ E  P    ++ 
Sbjct: 14  EWPTGADMDFTLTDEQ---RQLQQLARDFTR-----KEIIPIAAEYDQKEELP--WQVVE 63

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++   GL  +        +      +           +    ++  S    + + +  T 
Sbjct: 64  KAFEVGLLNASIPEHAGGLGLGMVDETLIGEEIGYGCMGIYTILMASELGITPILVGGTE 123

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K +               P+ +        L+E   G+D A + +      D     
Sbjct: 124 EQQKRFL-------------GPLTEKPGLAAFALSEPNNGSDAAGMHTTAYLDGDEWVIN 170

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  +  +++  ++ A  + + G      L+      G  Y ++K+K+G R++ T E
Sbjct: 171 GTKMWISNGGIAEVTVVFATTDKQGGHRATVALVVPKDAPGFSYNKIKHKMGQRASLTSE 230

Query: 289 LEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N        L  +  G    MK L    +  A  SV   R +L E++ YA++R   
Sbjct: 231 LVFENVRVPKENQLGGLGDGFKIAMKTLDKTRIPVAAGSVGLARRALEESVKYAKQRERF 290

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     ++  +AD+A+ +     +  + A   D+  +   E+A       I K +C 
Sbjct: 291 GTPISQFQAIQFKLADMAIGVETGRLMYQKAAWLVDQGHTHGAESA-------IAKAYCS 343

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +MA     EA++  GG GY+ E  + +  R+   N I  G+     + +   L K
Sbjct: 344 EMAFNAANEAIQIHGGYGYVGEYPVEKLLRDVKLNMIYEGTSEIQRVVISRGLLK 398


>gi|196009197|ref|XP_002114464.1| hypothetical protein TRIADDRAFT_27663 [Trichoplax adhaerens]
 gi|190583483|gb|EDV23554.1| hypothetical protein TRIADDRAFT_27663 [Trichoplax adhaerens]
          Length = 424

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 129/376 (34%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLE 147
           P  +  D            ++  + GL        F        H   A   +   +   
Sbjct: 64  PYAQEIDSNNNFSQIREFWKKLGNMGLLGITAPAEFGGTAGTFLHHCIALEEISRGSGSI 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + V    T      + PK+ S EY                L ++E   
Sbjct: 124 ALSYGAHSNLCVNQVVRNGTDEQKAKYLPKLISGEY-------------IGALAMSESGS 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +       +   L + + 
Sbjct: 171 GSDVVSMRLKAEKKGDYYILNGSKFWITNGPDADVLVVYAKTDPSAKQRGITTFLIEKNM 230

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +K+G R + T EL F +        +G        +     L  L  A   
Sbjct: 231 PGFSTAPKLDKLGMRGSNTCELIFEDCKVHESQIMGGSGKGVYVLMSGLDLERLVLAAGP 290

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+ ++  A  Y  +R      +    +++  +AD+ + + +  +  + +A + D  +
Sbjct: 291 VGLMQAAVDVAYPYVHQREQFNTKIAQFQLIQAKMADMYVKLNSCRSYLYNVARACDAGR 350

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S +             +C + A  V  +A++ +GG+GYI +    R  R++    I  
Sbjct: 351 IVSRD-------CAGVILYCAEAATKVALDALQLLGGNGYINDYPTGRILRDAKLYEIGA 403

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   + K
Sbjct: 404 GTSEIRRLLIGRSINK 419


>gi|325121799|gb|ADY81322.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 384

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 142/367 (38%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +  +      ++R A  L   +      + + +   +S + 
Sbjct: 39  DIVQQMRELGLFGLTIPEEYGGLGITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P+  S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGTEEQKQKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTSAMKDGD 145

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++ P +  F ++A+    + G   +   L + +  G+   ++  K+G 
Sbjct: 146 -FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T ++ F N        +      G    MK+L    L     SV      L +A+H
Sbjct: 205 KGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALH 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A
Sbjct: 265 YAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   
Sbjct: 318 SCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQVQQIIIAKN 377

Query: 458 LEKGTNL 464
           + +    
Sbjct: 378 MIREATA 384


>gi|15599631|ref|NP_253125.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9950669|gb|AAG07823.1|AE004858_1 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 381

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 28  EAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 88  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 135 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 194 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 254 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMELHLQG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 314 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 367 AGTNEIMKEIIARAL 381


>gi|258510174|ref|YP_003183608.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476900|gb|ACV57219.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 132/358 (36%), Gaps = 24/358 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L +S   GL        +  +      K +    L          + + +   +  +   
Sbjct: 42  LEKSKELGLFGLSIPEEYGGIGLSMLGKCVIYEELGKTINGYTTIIGAHNGIGSVGIVEF 101

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ + E+                  LTE + G++ AAI +   K  D  
Sbjct: 102 GTKEQKEKYLPKMATGEW-------------IGAFALTEPQAGSNAAAIKTTAVKKGDRY 148

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  +  ++P +  F ++A  +   G   +   + +    G     ++ K+G   + 
Sbjct: 149 ILNGQKIYITNAPYAHVFTVMAVTDPSKGAKGITSFIVERDFPGFRVGHIEKKMGLHGSH 208

Query: 286 TVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
           T ++ F +        L     G V  +KIL       A   +      L +++ +A  R
Sbjct: 209 TAQIFFEDMEVPEENVLGREGEGYVNALKILANGRAGLAARCLGSCEYLLDKSLAFAHER 268

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +Q +++  +A++AL+I       +R+A   D+  +  +EAA         K 
Sbjct: 269 IQFGKPIFEQQIIQHYLAEMALEIELLRTFVYRVAWMTDQKMNVIKEAAML-------KL 321

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++   V  +A++  GG G+I E  I R YR++    I  G+       +   L K
Sbjct: 322 YGSEVYNRVADKAVQIHGGLGFIAEYPIERFYRDARITRIYEGTSEIQKNIIAAQLHK 379


>gi|187934827|ref|YP_001886181.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
 gi|187722980|gb|ACD24201.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           B str. Eklund 17B]
          Length = 379

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 150/402 (37%), Gaps = 41/402 (10%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSF 124
              +E+AR    N   P++          +  EF   A+  L +     GL    + + +
Sbjct: 10  EMIKEMARQFAENELKPRVLEND------ENSEFPIEAYKKLGKL----GLIGIPYPKEY 59

Query: 125 EPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + A      + A     + ++ S+ S  ++    +    K + P + S  
Sbjct: 60  GGAGGDYLSYVLAVEEISKVDASFGISYSVTTSLCSGGII-NAASEEQKKKYLPDVLSG- 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                             GLTE   G+D     +  +K  D  Y L+G K F+++  +S+
Sbjct: 118 ------------KKLGSFGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSE 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A  +   G   +   + +    G    ++++K G +S    EL F N        
Sbjct: 165 TFLVFALTDKSKGSKGLSAFIVEKEFEGFSIGKIEDKCGIKSAQVSELIFENCKVPAENL 224

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +     G    MK+L    +  A   +     +   A  Y + R   G  L     +   
Sbjct: 225 VGAEGKGFGIAMKVLDGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFK 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ L+I  A  + ++ A    E +  S  AA A       K  C  +A  V  EA++ 
Sbjct: 285 MAELELEIEKAKYILYKAAMDKQEGRQYSVSAAKA-------KLSCTDVAMKVTVEAVQM 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG+GY++E ++ R  R++    I  G+     L +   + +
Sbjct: 338 LGGNGYMKEYNVERMMRDAKITQIYEGTNEIQKLIISGSIFR 379


>gi|254471846|ref|ZP_05085247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211959048|gb|EEA94247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 592

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 98/522 (18%), Positives = 184/522 (35%), Gaps = 57/522 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG--GERWD-KVEF 99
           L  +            E L + ++     E A+ A      L+  G     +  D  V+ 
Sbjct: 13  LKEVAGLGQLQAQPGQEELSDDLIEAILGEAAKFAEEEIAPLNRVGDENPAQLIDGSVKT 72

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P W  +  R    G +    D  F        + +  A   +         + P++T+ 
Sbjct: 73  SPGWKDVYTRWREGGWNALTGDPEFGGQGLP--NMLHVAVFEMWNAGSMAFTLCPTLTTG 130

Query: 160 SMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ A+    +P +   +  K+ S E+  T             + LTE   G+D+ A+ ++
Sbjct: 131 AVEAIEKHGSPELKAKYLEKLTSGEWTGT-------------MNLTEPHAGSDLNALRAK 177

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED------- 264
            + + DG Y +SG K F++    D       ++LA+  +   G   +             
Sbjct: 178 AEPVGDGSYKISGQKIFITYGDHDMTDNVIHLVLARLPDAPAGTRGISLFAVPKYFVNDD 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K+G   + T  + + +     G+L+G+ N     +  M     L
Sbjct: 238 GSLGEKNDVTVAGVEHKLGIHGSPTCTMSYGDNGGAIGWLIGEENRGLACMFTMMNNARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  EA+ Y+  R    G          +   P +KR +  +      A
Sbjct: 298 AVGVQGLGIAERAFQEALAYSLDRKQGRGVGSKTDGMDPIAVHPDIKRTLLSMKSQTQVA 357

Query: 370 TALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A+ +  A++ D AK   +       A  A ++ PI K         V +  ++  GG G
Sbjct: 358 RAICYACAHALDMAKLAPDAEQKKFWAERAGLLTPIAKALSTDFGVDVASLGIQIHGGMG 417

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +IEE   A+H R++    I  G+       L +  L   G +    L S +++   S   
Sbjct: 418 FIEETGAAQHLRDARIAPIYEGTNGIQSIDLVMRKLPMSGGDQVRSLISEIKEIAASVNA 477

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523
                L D  S            TE + LA+ A       + 
Sbjct: 478 DNTGELGDLGSKLDAAVADLETATEWM-LAAQADGKVSEALA 518


>gi|15888075|ref|NP_353756.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15155701|gb|AAK86541.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 594

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 108/519 (20%), Positives = 192/519 (36%), Gaps = 74/519 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDG 114
           L  L E ++    +E  R A      L       G +    KV     W  L RR    G
Sbjct: 28  LGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQGAKLADGKVTTPDGWADLYRRWAEAG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
            +       F        H +  A L +         ++P++T  ++ A+    +  + +
Sbjct: 88  WNSLTAPEEFGGQNLP--HMLNVAALEMWNSGSMAFALAPTLTMGAVEAIVTHGSNDLKR 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K
Sbjct: 146 IYLPKLVSGEWTGT-------------MNLTEPHAGSDLGVLKTRAERNGDGTYRIFGQK 192

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    DA      ++LA++         +  FLVP+ L D     GS N L    L+
Sbjct: 193 IFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAPGSRNDLFCHSLE 252

Query: 277 NKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +K+G   + T  + F +          G+L+G+ N     +  M     L   +  V+  
Sbjct: 253 HKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAIC 312

Query: 329 RVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +AI YA+ R               +I+ P + R +  +      + A+SF  A++
Sbjct: 313 EAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGSRAISFSCAHA 372

Query: 380 FDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D A +  + +  A        + PI K +       V +  ++  GG G+IEE   AR+
Sbjct: 373 IDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGGMGFIEETGAARY 432

Query: 434 YRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ-----------DLGSSG 480
            R++    I  G+       L +  L            + L +           DLG + 
Sbjct: 433 LRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAARTAASNRDDLGETA 492

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
           + +   L D       D  L+R    +   A + A  Y+
Sbjct: 493 RYLEASLNDL--ETTTDWLLSRIKAGETETALAGATAYQ 529


>gi|241087444|ref|XP_002409197.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215492666|gb|EEC02307.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 429

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 79/403 (19%), Positives = 145/403 (35%), Gaps = 28/403 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y L+   QEL R A +N  Q     P  +  DK    P +    ++    G         
Sbjct: 46  YGLTSEQQEL-REAAFNFAQ-KELAPHAQAIDKNNHFPEFRDFWKKLGDMGFMGITVPVE 103

Query: 124 FEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +  +      H +    L   A   A    + S    + +    T    + + PK+ S E
Sbjct: 104 YGGLGAGYLEHCLVEEELSRAAGGIALSYGAHSNLCINQIYRNGTEEQKRKYLPKLISGE 163

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+A++    QK  D         W  + P++D 
Sbjct: 164 H-------------VGALAMSEAGSGSDVASMKLSAQKDGDHYILNGTKFWITNGPLADV 210

Query: 243 FIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
             + A+           +   + + +  G    +  +K+G R + T EL F +       
Sbjct: 211 LFVYARTNPSAAKPQHGISAFIIEKNTPGFSIGQQLDKLGMRGSPTSELVFEDCRIPAKN 270

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+LN     +        L  A   V  M+ S   A  Y   R   G  +    +++ 
Sbjct: 271 LVGELNKGMYVLMSGLDYERLVLAAGPVGIMQASCDIAFEYVHTRKQFGKPIGSFQLLQG 330

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+   + A  +  +  A + D+    S++             +C + A  V  +A++
Sbjct: 331 KIADMYTTLNACRSYLYSTARAVDQGHVLSKD-------CAGVILYCAEKATQVALDAIQ 383

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C+GG+GYI +    R  R++    I  G+     L +   + +
Sbjct: 384 CLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRLIIGRTINE 426


>gi|225873978|ref|YP_002755437.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225793527|gb|ACO33617.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 383

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 16/285 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
             E       P+  T +A    L+E   G+D  A+ ++ +   D  +      W  ++  
Sbjct: 104 GNEQQKRKYLPLLATEMAGAYALSEASSGSDAFALQTRAELRGDHYHLNGQKLWITNAKE 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  FI+ A V+   G   +   L D    G    + ++K+G R+++T EL F +      
Sbjct: 164 AGVFIVFASVDLAAGYKGITAFLVDRDAPGFSLGKKEDKLGIRASSTCELIFEDCRVPA- 222

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
              NV     +  KI I  L+   + +    + LA+     A  YA+ R   G  + D  
Sbjct: 223 --ENVLGEVGKGYKIAIGTLNEGRIGIGAQMLGLAQGAWNCAARYAKERKQFGKAIADFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IA +A++I A   L +  A   D  K   +EAA A       KY+  + A  V +
Sbjct: 281 GVQFQIAQMAVEIEATRLLVYNAARLKDAGKDFVKEAAMA-------KYFASQTAERVAS 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A+E  GG G++++  + + YR++    I  G+ N  +  +  L+
Sbjct: 334 QAVEIYGGYGFVKDYPVEKFYRDAKIGKIYEGTSNMQLATIAKLM 378


>gi|169794773|ref|YP_001712566.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184159454|ref|YP_001847793.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213157899|ref|YP_002320697.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482317|ref|YP_002324499.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239501701|ref|ZP_04661011.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301347102|ref|ZP_07227843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB056]
 gi|301510411|ref|ZP_07235648.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB058]
 gi|301597306|ref|ZP_07242314.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB059]
 gi|332852224|ref|ZP_08434029.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332870446|ref|ZP_08439210.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332876296|ref|ZP_08444071.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169147700|emb|CAM85563.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|183211048|gb|ACC58446.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193078319|gb|ABO13293.2| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978]
 gi|213057059|gb|ACJ41961.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986221|gb|ACJ56520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|322509368|gb|ADX04822.1| acdA [Acinetobacter baumannii 1656-2]
 gi|323519392|gb|ADX93773.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729354|gb|EGJ60694.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332732183|gb|EGJ63451.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332735568|gb|EGJ66620.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 593

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/517 (17%), Positives = 192/517 (37%), Gaps = 58/517 (11%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRS 110
            +++L  +         +E+A+ A   T  L       G R++  +V     +    R+ 
Sbjct: 27  ANEKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   ++   +   
Sbjct: 87  AEGGWIGLGADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALSSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++   +D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATDRLQGRSAAGVQSPSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRD 433

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +  
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
             E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 493 ATEIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|146284170|ref|YP_001174323.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572375|gb|ABP81481.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 592

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/590 (18%), Positives = 205/590 (34%), Gaps = 80/590 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR-MAN 78
           D  F LN+         + +  L  AL A    VV  E             +E  +  AN
Sbjct: 10  DMRFVLNEV--------FDAPKLWQALPA-LAEVVDAE-------TADAILEEAGKITAN 53

Query: 79  YNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
              P   +    G RWD   V     +    +     G      D +F  +   +    +
Sbjct: 54  SIAPLNRSGDEEGCRWDGGAVSTPAGYREAYQLYAEGGWVGVGGDPAFGGMGMPKVISAQ 113

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              +   A L  G     +  +   +    +  + + + P +++  +             
Sbjct: 114 VEEMMNSASLAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVW------------- 160

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251
           +  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++  
Sbjct: 161 SGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPD 220

Query: 252 ------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
                  +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+++G
Sbjct: 221 APAGSRGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348
           + N     +  M     L   I  ++    S   AI YAR R  S               
Sbjct: 281 EPNKGLAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADP 340

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKY 402
           +I  P ++R +  +        A S  +A   D AK   +EAA         ++ P+ K 
Sbjct: 341 IIVHPDVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQRAEAQVALLTPVAKA 400

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEK 460
           +   M         +  GG G+I E    +  R+     I  G+     LD++   ++  
Sbjct: 401 FLTDMGLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGS 460

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAA 516
           G  +++     +   + S+G  +        +       L  ++ ++         +A+ 
Sbjct: 461 GGTMYQAFVDEIRAFVASAGADLREFTEPLKAALDNLDELTAWVIDQAKANPNEIGAASV 520

Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHC--------MLHGRFNAAHIIDSL 558
            Y       A  ++  R      +           +   RF  A ++  +
Sbjct: 521 EYLHVFGYTAYAYMWARMAAVALAKQGEGDFYQSKLGTARFYFARMLPRI 570


>gi|259416521|ref|ZP_05740441.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259347960|gb|EEW59737.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 593

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 102/530 (19%), Positives = 193/530 (36%), Gaps = 75/530 (14%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRS 123
               +E  ++A      L+      G R +  V + P  + A   +    G         
Sbjct: 38  GAVLEEAGKIARDVLHPLNVVGDTEGCRLENGVVYTPIGFKAAFEQVKEGGWPGLDMPEQ 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +                +  A          +  +AS +    T      + PK+ S E+
Sbjct: 98  YGGQNMPYVIGTAVGEFFSGANQAFTMYQGLTHGAASAILAHGTDAQKDTYLPKMVSCEW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKIFISAGDHDMS 204

Query: 243 ----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++ G       V  F+VP+ + +     G  NG+   +++ K+G   N+T 
Sbjct: 205 ENVIHLVLAKIPGGPEGIKGVSLFIVPKFIVNADGTPGERNGVSVGKIEEKMGIHGNSTC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLGD++     +  M     L   +  ++    +   A+ YA+ R   G 
Sbjct: 265 VMNYDAATGWLLGDMHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNAVEYAKDRLQ-GR 323

Query: 348 -------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--Y 392
                         LI  P ++R + D       A A     A   D+A    ++ A   
Sbjct: 324 DVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGATMIDKAHRSEDKDADGL 383

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  G+     L
Sbjct: 384 ISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQAL 443

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI--AL 510
           D++                L QD G        +++     CKE+  ++    +     L
Sbjct: 444 DLVG-------------RKLAQDGGKHVMAFFDLVK---GFCKENAEISDSYAKDFIEPL 487

Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            +++  L  AGM      F++N       + +  L G  +  H+   + L
Sbjct: 488 KAASKDLQAAGM-----YFMQN----GMKNPNNALAGSTDFMHMFGHVCL 528


>gi|260461926|ref|ZP_05810171.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032173|gb|EEW33439.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 389

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 148/414 (35%), Gaps = 43/414 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRR 109
           P+    E+ +L +  +   ++E+A                  R+D+ E +         +
Sbjct: 13  PAWAADEVGMLYDMAVRFMSEEIAP-----------------RYDEFEKNEMVDRESWLK 55

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL C+     +       AH+           ++   +   +   A  +    +  
Sbjct: 56  AGAAGLLCASMPEEYGGSGGTFAHESAIIEAIGHVGVDGFGIGLHNSIVAPYILHYGSEE 115

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K W PK+ + E             +   + +TE   G+D+  + ++ QK  +      
Sbjct: 116 QKKKWLPKLATGE-------------LIGAIAMTEPGAGSDLQGVKTRAQKDGNQYKVNG 162

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVE 288
              +  +  +++  I++ + +   G      ++ +     G    R  +KIG ++N T E
Sbjct: 163 SKTFITNGQLANFIIVVTKTDPEKGAKGTSLIVVETDEVEGFERGRNLDKIGLKANDTSE 222

Query: 289 LEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F++        L      G ++ M+ L    L     +++ +  +LA  I Y + R  
Sbjct: 223 LFFNDVRVPTSNLLGHEEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIDYVKERKA 282

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +ID    +  +A++  +                             + A + KYW 
Sbjct: 283 FGKAIIDFQNTQFKLAELKTEATIGRVFYNDCVARHING-------GLDPVTASMAKYWL 335

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   V+ E ++  GG GY+ E  IAR +R++    I  G+   M L +   L
Sbjct: 336 SDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKLLIGRSL 389


>gi|307330543|ref|ZP_07609684.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306883792|gb|EFN14837.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 391

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 137/390 (35%), Gaps = 20/390 (5%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ++ R A  +  +     P     D+    P     L   + + LH      S+       
Sbjct: 18  DMLRDAVRSLAE-AKIAPFAAEVDEGARFP--QEALDALVANDLHAVHVPESYGGSGADA 74

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              +            +  + + +   +  V L  +  + K +              AP+
Sbjct: 75  LATVIVIEEVARVCASSSLIPAVNKLGSLPVILSASDELKKRYL-------------APL 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D A + ++  +  D        +W  ++ +S+ + ++A  + 
Sbjct: 122 AKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGDFYVLNGVKRWITNAGVSEYYTVMAVTDP 181

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   + +    G+ +   + K+G + + T E+   N        +    TG   
Sbjct: 182 EKRSKGISAFVVEKGDPGVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFAT 241

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    +  A  ++   + +L  A  Y + R   G  + D   ++  +AD+A+ + A
Sbjct: 242 AMKTLDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKLEA 301

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   +   +   +       A   K +    A  +  +A++ +GG GY  + 
Sbjct: 302 ARQLTYAAAAKSERVFAGGGKEDLTFFGAA-AKCYASDAAMEITTDAVQLLGGYGYTRDY 360

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R  R++    I  G+     + +   L
Sbjct: 361 PLERMMRDAKITQIYEGTNQVQRIVMARNL 390


>gi|219849259|ref|YP_002463692.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219543518|gb|ACL25256.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 389

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     L+++   GL    +   +  +      + +    L       
Sbjct: 26  PIARAIDEEERVP--FETLKKAAELGLLGVPFPERYGGLDLGITGYCVLMEELNRACASH 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +  +A  + L    +  + +   +                       LTE   
Sbjct: 84  ATIIGAHAQLAAMSIYLGGNEQQKETYLRALIEGRMWG-------------AWALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           G+D A I +  ++  D         W  +   +D  ++ A  +  +G    +   + + +
Sbjct: 131 GSDAAHIQTSAERRGDEWVLNGQKMWITNGSFADVIVVFAVSDKNLGARGGITAFIVEKT 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R++ T  L F +        L  V  G    M+ L          
Sbjct: 191 MPGFRVGKIEDKMGLRASHTASLYFEDCRVPAENVLGQVGMGFPLAMRTLDIGRCGLGAS 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +   +  Y   R+  G  + +   ++  +AD+A+ +     + +  A   D  
Sbjct: 251 SIGSAKEAFELSRKYMITRYQFGRPIAEFQALQFKLADMAVKLYTMEQIVYDCARRVDAG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E+        I KY+C +MA  +I EA++  GG G+  E  + R YR++    I 
Sbjct: 311 QQATLES-------SIVKYYCTEMASQIIDEAIQIHGGMGFSRELPLERMYRDARVTRIF 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       + + L K
Sbjct: 364 EGTNEIQKHVIASELLK 380


>gi|262380863|ref|ZP_06074014.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|262297498|gb|EEY85416.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 593

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 85/496 (17%), Positives = 183/496 (36%), Gaps = 56/496 (11%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRS 110
            ++ L  +         +E+A+ A   T  L+      G +++   V     +    R+ 
Sbjct: 27  ANENLNHVDAATAEAILEEMAKFAQNVTLPLNRSGDEEGAQYNNGAVTTPAGYKEAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   +    +   
Sbjct: 87  AEGGWIGLGADEEWGGQAMPKMLTVLADEMLFATNPAFMLYPLLSVGAGMALNSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    GF++G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQN 313

Query: 335 AIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           A  YA  R   G               ++    ++R + ++  +  A+ A +  +    D
Sbjct: 314 AAQYATDRIQ-GRNASGIKSPNKVADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLD 372

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 + ++  +      ++ PI K +    A     +A    GG GYI E  + +  R
Sbjct: 373 ITKFSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVR 432

Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-IS 492
           +     I  G+      D++   L++      E+  + + +D  ++    +  ++D+ + 
Sbjct: 433 DLRIAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLD 491

Query: 493 LCKEDKGLARFLTEKI 508
              + + ++RF+ E+ 
Sbjct: 492 AATDIEAVSRFIIEQA 507


>gi|257439029|ref|ZP_05614784.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii A2-165]
 gi|257198519|gb|EEU96803.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii A2-165]
          Length = 389

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 139/384 (36%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ++ D  E+ P     + +    G+    +  S         ++ +    L  +    
Sbjct: 26  PLAKKVDAEEYFP--KETVEKMGKLGMMGIYFPTSVGGAGGDVLSYVMAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    TP     + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTPEQKAKYLPKLCSGEW-------------LGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGCFLVPRL 261
           GTD     +   K  D  + L+G K F+++   +D FI++A  +           L    
Sbjct: 131 GTDAQGQQTIA-KEEDDCWVLNGSKIFITNAGFADVFIVIAVTDRVLDKKGRPTKLCSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + + +  G    + ++K+G R ++T EL F +        L V     +    +  LD  
Sbjct: 190 IVERTDPGFSVGKAEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQ--LAMATLDGG 247

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      + Y + R   G  +      +  +A++   + AA  L +  
Sbjct: 248 RIGIASQALGIAEGALEETVAYVKERKQFGRSISAFQNTQFELAEMKARVEAAKYLVYAA 307

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A    +A   ++      + A   K    + A  V    ++  GG GY  +  I R  R+
Sbjct: 308 ALKKQQAMDGAK--VRYSVEAAQAKLIAARTASDVTRRCLQLFGGYGYTRDYPIERMMRD 365

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+    ++ +   L K
Sbjct: 366 AKITEIYEGTSEVQMMVISGALLK 389


>gi|325123411|gb|ADY82934.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 593

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/515 (17%), Positives = 191/515 (37%), Gaps = 58/515 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G R++  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   ++   +    +
Sbjct: 89  GGWIGLGADEEWGGQGMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALSSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L +     G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA  R                  ++    ++R + ++  +  A+ A +  +    D  K
Sbjct: 316 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ AA         ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
           E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 495 EIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|104782574|ref|YP_609072.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48]
 gi|95111561|emb|CAK16281.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48]
          Length = 375

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 140/398 (35%), Gaps = 28/398 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +++   Q++A              P  E+WDK    P     +      GL   +    +
Sbjct: 2   LVTEEQQQIADAVRAFA--QERLKPFAEQWDKEHRFP--KEAIEEMAGLGLFGMLVPEQY 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
                       A             +MS   +   +  L   T    + +         
Sbjct: 58  GGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILKFGTEAQKQQFL-------- 109

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                AP+   ++     LTE + G+D +++ ++ +   D        ++  S   +   
Sbjct: 110 -----APLASGAMLGAFALTEPQAGSDASSLKTRARLDGDHYVLNGSKQFITSGQNAGVV 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 165 IVFAVTDPDAGKRGITAFIVPTDAPGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  SV   R +   A  YA  R   G  LI+   +   +A
Sbjct: 225 EEGQGYKIALANLEGGRIGIASQSVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  IA A  +    A   D  +    EA+ A       K +  +MA  V ++A++ +G
Sbjct: 285 DMATRIAVARQMVLHAAALRDAGRPALVEASMA-------KLFASEMAEKVCSDALQTLG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 338 GYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIARNL 375


>gi|255318694|ref|ZP_05359921.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378125|ref|ZP_06071282.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304192|gb|EET83382.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299410|gb|EEY87322.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 375

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK    P    +L +    GL   +    +          + A      A    
Sbjct: 24  PKAAEWDKHSTFP--KEVLSQMGKLGLMGMLIPEQWGGSDTGNLAYVLALEEIAAADGAT 81

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   + +A   T    + +               P+ +  +     LTE   
Sbjct: 82  STIMSVHNSVGCVPIAKFGTAEQKQKYL-------------MPLAQGEMIGAFALTEPHT 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AAI ++  K  D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDAAAIKTRAVKNGDDWIINGAKQFITSGNNAGVIIVFAITDPEAGKKGISAFIVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R + K+G  ++ T ++  +N        L     G    +  L    +  A  +
Sbjct: 189 QGYEVVRTEEKLGLHASDTCQIALTNVRVPNTLMLGQQGEGLKIALSNLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  K
Sbjct: 249 VGLARAALEEATRYAKERITFGQPIFEHQAIAFRLASMATEIEAARQLVHHAARLKEAGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++  GG GY+++  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFSSEMAERVCSSALQIFGGYGYLKDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|227485688|ref|ZP_03916004.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236360|gb|EEI86375.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 641

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 140/374 (37%), Gaps = 34/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    +++     GL    + + +        ++ I    L  +    
Sbjct: 26  PIAFELDQKNEFPD--DIVKEMGELGLMGIPYPKEYGGAGLDVISYAITVEELSRVDGGV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   +  +    T    + +               P+ K       GLTE+  
Sbjct: 84  GVICSAHTSLGSWPIFAFGTEEQKQKYL-------------VPLAKGEKIGAFGLTEENA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      D  Y L+G K F+++ P +D +++ A     +G   +   + +  
Sbjct: 131 GSDAGGTETTAVLNGDH-YILNGKKIFITNAPKADTYVVFAVTTPGIGTHGISAFIVEKE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  +    +K+G RS++T EL F N         N+     +   I +  LD   + +
Sbjct: 190 FEGFTFSDHYDKLGIRSSSTAELHFDNVKVP---KENLLGKEGQGFAIAMATLDGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + + +     A+ YA+ R   G  +         +AD+A  +  A  + +  A   
Sbjct: 247 ASQALGIGQGAYESALAYAKEREQFGMPIAHLQRNTFKLADMATYLRGARLMIYSAAELK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  S EAA A+ +A         +A  +  EA++  GGSG+I+   + R +R++   
Sbjct: 307 ENHERYSAEAAMAKQVA-------SDLAMKITTEAVQLYGGSGFIKGVDVERFFRDAKIT 359

Query: 441 SILLGSGNAMVLDV 454
            I  G+   M + V
Sbjct: 360 QIYEGTNEIMRVVV 373


>gi|152985463|ref|YP_001350343.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960621|gb|ABR82646.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 378

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 25  EAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 191 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMEQHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 311 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARAL 378


>gi|330812185|ref|YP_004356647.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380293|gb|AEA71643.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 598

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/488 (19%), Positives = 176/488 (36%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIW 120
            ++S   +E AR        L+      G  +D  V   P  +     + +  G H    
Sbjct: 36  DMVSAIIEEGARFCENVLAPLNRSGDEEGCHFDNGVVTTPTGFKQAFAQYVEGGWHGLAA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   +    G     +  + S +    T    + +  K+ +
Sbjct: 96  DPAYGGQGLPSSLGLVISEMIGSSNTSWGMYPGLTHGAMSAIHAHGTSEQKQTYLSKLTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  I ++    +DG Y +SG K F+S+   
Sbjct: 156 GQWTGT-------------MCLTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEH 202

Query: 241 DA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G  NG+    +++K+G +++
Sbjct: 203 DMSDNIIHLVLAKLPDAPAGTKGISLFIVPKFLPDATGEAGPRNGVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  L F    GFL+G+ N     +  M     L + +  +     S   AI YA  R  
Sbjct: 263 ATCVLNFDGAKGFLIGEPNKGLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
                           +I  P ++R +  +        AL++  A   D A   ++E A 
Sbjct: 323 MRSLTGPKVPEKVADPIIVHPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSADETAR 382

Query: 392 -----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +       V    M+  GG G+I E  + +  R+     I  G+
Sbjct: 383 QEAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + +   ++       L+D +            L
Sbjct: 443 NGIQALDLLGRKVLGSQGKLLRGFTRIVHKFCAANAGH--PQLKDYVEQLNGLNQQWGEL 500

Query: 505 TEKIALAS 512
           T ++ +A+
Sbjct: 501 TTRVGMAA 508


>gi|40062853|gb|AAR37724.1| isovaleryl-CoA dehydrogenase, putative [uncultured marine bacterium
           442]
          Length = 389

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    L  +    G+     D ++    +   AH I    +   +   
Sbjct: 33  PRATDIDRNNEFPM--DLWPKLGALGVLGMTVDEAYGGTNMGYLAHAIVMEEISRASAAV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TPR  + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCLNQIQKNGTPRQREQYLPKLCSGEH-------------IGALAMSEPSA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ E   G   +   + +   
Sbjct: 138 GSDVVSMRLRADKKGDHYILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDS 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A++S   
Sbjct: 198 PGFSRAQKLDKLGMRGSNTCELVFEDCEVPAENILGELNKGVAVLMSGLDYERAVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L   + Y   R      + +  +++  +AD+    AA+ +  + +  + D  +
Sbjct: 258 VGLMQACLDVCVPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  +MA     +A++ +GG+GYI +    R  R++    I  
Sbjct: 318 DSRKDAA-------AVILYTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K +N
Sbjct: 371 GTSEIRRMLIGRELFKESN 389


>gi|331268674|ref|YP_004395166.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           botulinum BKT015925]
 gi|329125224|gb|AEB75169.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum
           BKT015925]
          Length = 381

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 138/380 (36%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    +  +     +      + +        ++ I    +       
Sbjct: 26  PIAGDIDEKGEIP--KEIWEKLARYNMISIPIPKEYGGAGGDYISYSIVVEEISKKCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +   +      +    T    + +   + +            K        LTE   
Sbjct: 84  GVMVSGVASLFGWPILKFGTEEQKEKYLKPLITG----------IKQGF---FALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A+  +  +   D  Y L+G K F+++   +D  I+ A  +   G   +   + +  
Sbjct: 131 GTDAASQQTIAKCRGD-YYILNGSKCFITNGAKADFGIVFAMTDRSKGVKGISAFIVEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + +NK+G R   T EL F +         N+     +   I +  LD   + V
Sbjct: 190 FQGFTIGKHENKMGVRGTNTTELIFKDVKVP---KENLLGKEGKGFNIAMATLDGGRIGV 246

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     E + Y ++R   G  L     ++  ++++A  I AA  L +  A+  
Sbjct: 247 ASQALGIAQGALDETVKYIKQRKQFGKPLSSFQGLQWTVSEMATRINAARWLIYDAADKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++    ++EAA A       K +  + A  V+  A++  GG GYI++  + R YR++   
Sbjct: 307 NKGLPYTKEAAMA-------KLYATRTAVYVVDRAVQLHGGYGYIKDYPVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + + + + +
Sbjct: 360 EIYEGTAEVQRMVIASKILQ 379


>gi|116327038|ref|YP_796758.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332303|ref|YP_802021.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119782|gb|ABJ77825.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125992|gb|ABJ77263.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 387

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 149/410 (36%), Gaps = 37/410 (9%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           E+ LS   +EL  +A         P+   +   GE       +P   A+L+++   GL  
Sbjct: 2   EFALSSEQKELRDLARKFAKEEVRPKAEHHDRTGE-------YPL--AILKKAWEIGLMN 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +  F      +   +                +  +  + + V L  + R+ K++   
Sbjct: 53  LHIESRFNGADMSELDGVVIGEELFWGCSGVATAILANNLALAPVILGASDRIKKEFI-- 110

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                       PM +        +TE   G+D+AAI +  +K+ D         W  ++
Sbjct: 111 -----------QPMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDEYIINGSKMWITNA 159

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +D   +LA+ +   G   +   + D    G+   + +  +G + + T  + F +    
Sbjct: 160 GYADWLFVLAKTDPSAGHKGITGFIVDAKSPGIIVGKKEINMGQKCSDTRAITFEDVKVP 219

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              ++G                    AI +V   R ++  +++YA  R   G  ++D   
Sbjct: 220 SWQMIGREGEGFKIAMGAFDRTRPGVAIGAVGVARAAMEHSVNYANTRSTFGRPIMDNQG 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IA++A DI A   L ++ A   D     +         A I K +C  M   V  +
Sbjct: 280 ISFMIAEMARDIEAGRLLCYQAAWIIDNGFRNT-------YQASIAKMFCADMCMKVCTD 332

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           A++ +GG G+  E  + +  R++    I  G+     + V   L  G  +
Sbjct: 333 AVQVLGGYGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 382


>gi|330875099|gb|EGH09248.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 387

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 143/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    PA   + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAEISPRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + PK+ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L V 
Sbjct: 174 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  IAD+
Sbjct: 234 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|260548810|ref|ZP_05823032.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407978|gb|EEX01449.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 593

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/515 (17%), Positives = 190/515 (36%), Gaps = 58/515 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G R++  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPTGFKDAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + A  +              SV +   ++   +    +
Sbjct: 89  GGWIGLGADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALSSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L       G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVKEDGSLGDRNHVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA  R                  ++    ++R + ++  +  A+ A +  +    D   
Sbjct: 316 QYATDRLQGRSAAGVQSPSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
           E + + +F+ E+ A      ++AA  Y   +  ++
Sbjct: 495 EIEAITQFIIEQAAENVDFPNAAAVDYLHAVGLLS 529


>gi|78067517|ref|YP_370286.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383]
 gi|77968262|gb|ABB09642.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
          Length = 599

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 96/493 (19%), Positives = 179/493 (36%), Gaps = 77/493 (15%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +  +     L      G+R       D V   P  +    
Sbjct: 35  HADLD---ADTINQVLEEAGKFCSE---VLFPLNQVGDREGCTYEGDGVVKTPTGFKEAY 88

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-- 165
           ++ +  G      D  +          +  A   +M        M P ++  +   L   
Sbjct: 89  QQYVEAGWPALGCDPDYGGQGLPAF--VNNALYEMMNSANQAWTMYPGLSHGAYECLHAH 146

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
             P + K + PK+ + E+  T             + LTE   GTD+  + ++ +   DG 
Sbjct: 147 GAPELQKAYLPKLVTGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGS 193

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNG 269
           Y +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG
Sbjct: 194 YSISGTKIFISSGEHDMAENIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGAPGERNG 253

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    +++K+G   N+T  +   N  G+++G+ N     +  M     L      +    
Sbjct: 254 IKCGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGAQGLGLTE 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
           V+   ++ YA+ R                  +I  P ++R +         A A ++  A
Sbjct: 314 VAYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSA 373

Query: 378 NSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              D      +   R E A    ++ PI K +    A      AM+  GG G+I E  + 
Sbjct: 374 LQIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGME 433

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R++  N I  G+ +   LD+L     G             D+G+  KK   ++ +  
Sbjct: 434 QYVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTEFA 480

Query: 492 SLCKEDKGLARFL 504
                   +A F+
Sbjct: 481 EAEGVKPEMAEFI 493


>gi|169780668|ref|XP_001824798.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus oryzae RIB40]
 gi|46430489|dbj|BAD16690.1| isovaleryl-coenzyme A dehydrogenase [Aspergillus oryzae]
 gi|83773538|dbj|BAE63665.1| unnamed protein product [Aspergillus oryzae]
          Length = 430

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 143/374 (38%), Gaps = 20/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             + D     PA   + ++    G      +  +  +    QAH I    L   +   A 
Sbjct: 70  AAKTDAQNEFPA--EMWKKLGDAGFLGITANEDYGGLGMGYQAHCIVMEELSRASGSIAL 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  +P   + + P + S                   L ++E   G+
Sbjct: 128 SYAAHSQLCVNQLSLNGSPEQKERFLPGLLSG-------------DKIGALAMSEHSAGS 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  +++  G        W  + P +D  ++ A+ E + G   +   + + + +G
Sbjct: 175 DVVSMKTTAKEVDGGYVLNGTKMWITNGPDADFIVVYAKTEPQKGSKGITAFVVEKTFDG 234

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     +LG++N     + +   L  L  +   + 
Sbjct: 235 FSCARKLDKLGMRGSNTGELIFEDVFVPKENVLGEVNRGVKVLMEGLDLERLVLSAGPLG 294

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   + A+ A ++  A   D + S 
Sbjct: 295 IMQAALDLVLPYTHVRKQFGTPIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASL 354

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S E +           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 355 S-EVSIRTQDCAGAILYAAERATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 414 SEIRRMVIGRAFNK 427


>gi|254238903|ref|ZP_04932226.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719]
 gi|254244753|ref|ZP_04938075.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192]
 gi|126170834|gb|EAZ56345.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719]
 gi|126198131|gb|EAZ62194.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192]
          Length = 381

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 28  EAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 88  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 135 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 194 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 254 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMEQHLQG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 314 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 367 AGTNEIMKEIIARAL 381


>gi|325955394|ref|YP_004239054.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323438012|gb|ADX68476.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 380

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 139/373 (37%), Gaps = 30/373 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P     +++    G    + D  +          + A  +  +A+++A   +  
Sbjct: 32  DETSTFPT--DAVKKMGELGFLGMMVDPKYGGAGLDSVSYVLA--MEEIAKVDASAAVVM 87

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV ++ + A             K  + E       P+ K        L+E   G+D  + 
Sbjct: 88  SVNNSLVCA----------GMEKYCNEEQKQKYLVPLAKGEKIGAFCLSEPDAGSDATSQ 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +      D         W  +   +  +I++AQ     G   +   + +    G     
Sbjct: 138 KTTAIDKGDYYLLNGTKNWITNGGTASTYIVIAQTHEEKGHRGINAFIVEKGWEGFEIGP 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            + K+G R + T  L F++        +     G    M +   L+   + ++   + +A
Sbjct: 198 KEQKMGIRGSDTHSLFFNDVKVPKENRIGEDGFGFKFAMNV---LNGGRIGIASQALGIA 254

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +     A+ YA+ R   G  +I+   +   +AD+A +I AA  L  + A   DE K  SE
Sbjct: 255 QGAYELALEYAKIRKAFGTEIINHQGVAFKLADMATNITAARMLCLKAAVEKDEGKDISE 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A++ A  T  W       V  EA++  GG+GY+ E  + R  R++    I  G+  
Sbjct: 315 SGAMAKLFASTTAMW-------VTTEAVQIHGGNGYVREYHVERMMRDAKITQIYEGTSE 367

Query: 449 AMVLDVLNLLEKG 461
              + +   + KG
Sbjct: 368 IQKIVISRSIAKG 380


>gi|209964932|ref|YP_002297847.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958398|gb|ACI99034.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 598

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/494 (19%), Positives = 185/494 (37%), Gaps = 63/494 (12%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDK--VEF 99
           L  ++           E     ++    +E  ++A +   P        G   D   V  
Sbjct: 15  LNHVVDLPAVAALPGYEAASPDLVDAVLEEAGKLARDVLAPINWQGDQEGAVLDNGVVRT 74

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              +    R     G +   +D             +    ++  A +        +  + 
Sbjct: 75  PTGFKEAYRAYAEGGWNSVPFDPEHGGQGLPWTLAMPIQEMWNAANMSFALCPMLNQGAV 134

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++    +    + +  K+ S E+  T             + LTE + G+D+ A+ S+  
Sbjct: 135 ELLTEHGSEEQKRLYLEKMISGEWTGT-------------MNLTEPQAGSDVGAVRSRAV 181

Query: 220 KISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED---- 264
              DG Y ++G K F++    D       ++LA+          +  F+VP+ L +    
Sbjct: 182 PAGDGTYRITGQKIFITYGEHDFTSNIIHMVLARTPDAPPGVKGISLFIVPKFLVNPDGS 241

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G+ N L    L++K+G  ++ T  + F +     GFL+G+ N     +  M     L  
Sbjct: 242 PGARNDLRCAGLEHKLGIHASPTAVMAFGDNGGATGFLIGEENRGIEYMFTMMNNARLGV 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATA 371
            +  V     +  +A  YA+ R  S            +I+ P ++R +      I AA A
Sbjct: 302 GVQGVGIAERAYQQARDYAKTRVQSRALTGRDPGPVAIINHPDVRRMLLTAKSQIEAARA 361

Query: 372 LSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           LS+  A++FD AK       R    A   ++ PITK WC  +     +  ++  GG G+I
Sbjct: 362 LSYLTASAFDRAKRHPDAEERRRAKALNDLLTPITKAWCTDLGVESASLGVQVHGGMGFI 421

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE   A+H R++    I  G+      D+             +F  + +D G +  +++ 
Sbjct: 422 EETGAAQHLRDARIAPIYEGTNGIQANDL-------------VFRKVARDGGETALRLLA 468

Query: 486 ILRDSISLCKEDKG 499
            +RD+ +  K+  G
Sbjct: 469 EIRDTAAAAKDRPG 482


>gi|302560294|ref|ZP_07312636.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302477912|gb|EFL41005.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 385

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 128/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH       +          +            +
Sbjct: 33  PYAAAVDEEARFP--REALDALVANDLHAVHVPEEYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEALKKKYM-------------TPLAKGDGMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++  S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTRAVRDGDAYVLNGVKRWITNAGESEYYTVMAVTDPEKRSRGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y R R   G  + D   ++  +AD+A+ I AA  L++  A   +   S
Sbjct: 258 GIAQGALDYAKGYVRERKQFGKPIADFQGIQFMLADMAMKIEAARQLTYAAAAKSERGDS 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|218893526|ref|YP_002442395.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218773754|emb|CAW29568.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 381

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   G+ CS     +  +     +          A L 
Sbjct: 28  EAVPFHRQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLT 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 88  GIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G   +   + +  
Sbjct: 135 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G +  M+ L    L   I 
Sbjct: 194 TPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIG 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 254 ALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMEQHLQG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 314 K-------LDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 367 AGTNEIMKEIIARAL 381


>gi|86140672|ref|ZP_01059231.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85832614|gb|EAQ51063.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 380

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 130/368 (35%), Gaps = 26/368 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+ +  P    L+++    G    +    F        ++ +    L  +    +  +  
Sbjct: 32  DEKQHFP--KELIKKMGDMGFLGMMAPTEFGGGGMDTISYVLVMEELSKIDASASVIVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +A   +    + +  K+ + E                   L+E   G+D  +
Sbjct: 90  NNSLVNYGLATYGSQAQKEKYLSKLTTGE-------------KLGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   +D ++++AQ +       +   + +    G    
Sbjct: 137 QKTTAIDQGDHYILNGTKNWITNGGSADYYLVIAQTDKEKKHRGINAFIVEKGWEGFEIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             + K+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKEQKLGIRGSDTHSLIFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A  Y++ R   G  + +   +   +AD+ ++I AA  +  + A   D+  +    +
Sbjct: 257 AFELARDYSKVRKAFGTEICNHQAIAFKLADMQVEIEAARHMVMKAAWDKDQGNNYDISS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A++ A        K+A  V  EA++  GG+G+++E  + R  R++    I  G+    
Sbjct: 317 AMAKLHA-------SKVAMDVTVEAVQVHGGNGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLL 458
            + +   L
Sbjct: 370 KIVISRGL 377


>gi|282866267|ref|ZP_06275313.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282558853|gb|EFB64409.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 368

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 129/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   LH       +          +        A   +
Sbjct: 16  PFAAAVDEEARFP--QEALDALVASDLHAVHVPEEYGGAGADALATVIVIEEVARACASS 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + + +               P+ K        L+E   G
Sbjct: 74  SLIPAVNKLGSLPVILSGSEALKRKYL-------------GPLAKGDAMFSYALSEPDAG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 121 SDAAGMKTKAVRDGDFWVLDGVKRWITNAGVSEYYTVMAVTDPTKRSKGISAFVVEKSDE 180

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 181 GVSFGAPERKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 240

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +    
Sbjct: 241 GIAQGALDYAKGYVKERKQFGKPIADFQGIQFMLADMAMKIEAARQLTYAAAAKSERGD- 299

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 300 -----ADLTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 354

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 355 TNQVQRIVMARNL 367


>gi|150020551|ref|YP_001305905.1| acyl-CoA dehydrogenase domain-containing protein [Thermosipho
           melanesiensis BI429]
 gi|149793072|gb|ABR30520.1| acyl-CoA dehydrogenase domain protein [Thermosipho melanesiensis
           BI429]
          Length = 380

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 137/376 (36%), Gaps = 34/376 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  ++ D+ E+ P     +++    G+    +             + +    L  +    
Sbjct: 26  PIAKQVDEEEYFP--FETVKKMGQIGMMGIPFPNEVGGAGGDYLTYILAVEELAKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L + +      +         + +               P+ K +      LTE   
Sbjct: 84  AIILSAHTSLCCEPIYRFGNDFQKRKYLI-------------PLVKGAKIGAFALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +  +   +  Y L+G K F  +  ++D +I+ A     +G   +   + +  
Sbjct: 131 GTDAANQQTTAKLQGEN-YILNGTKIFVTNGGVADIYIVFATTNRELGTKDISAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    +++ K+G R + T E+   N         N+     E  KI +  LD   + V
Sbjct: 190 FEGFKIGKVEEKMGIRGSMTTEIVLENCMVP---KENLLGAEGEGFKIALKTLDGGRIGV 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE      + Y + R      L     ++  IA++  +  AA  L +  A   
Sbjct: 247 AAQALGIAEGAIDEVLKYVKERKQFNRPLSSFQGLQWYIAEMITNTRAAKLLVYDAALKK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+   +S +A+ A+        +    A  V  +A++  GG GY+++  I R  R++   
Sbjct: 307 DKGLLKSADASMAKK-------FASDNAMFVTTQAVQIFGGYGYMKDYPIERMMRDAKIT 359

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+     + + N
Sbjct: 360 QIYEGTNEVQKMVIAN 375


>gi|296140757|ref|YP_003648000.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028891|gb|ADG79661.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 387

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 85/402 (21%), Positives = 154/402 (38%), Gaps = 39/402 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +   A++ AR             P    WD  +  P     ++ +   G+       
Sbjct: 10  DRAVVDMARDFAR---------KRLAPYALEWDATKHFPV--EEMKEAGSLGMAAIYTRE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R               +S       MV    +    ++W PK+    
Sbjct: 59  DVGGSGLRRLDGVRIFEELAKGDPVTAAFLSIHNMCTWMVDTYGSQEQRQEWIPKL---- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                 APM    +     LTE   G+D A++T++ ++  D    L+G K F+S   + D
Sbjct: 115 ------APM---DIMASYCLTEPGAGSDAASLTTKAERDGDDF-VLNGTKQFISGGGASD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+ EG  G   +   L D    GL +   + K+G  S  T ++ F N        
Sbjct: 165 LYVVMARSEGE-GARGISTFLVDKGTPGLSFGPAEVKMGWHSQPTTQVIFENVRIPASRM 223

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L    G  +   I +       L+ A  S+ G + +   A+ Y   R   G  LID+P +
Sbjct: 224 LGGPEGAGKGFGIAMNGLNGGRLNIAACSMGGAQAAYDLALQYMTERETFGRKLIDEPTI 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  + AA  + +R A + DE      E      +  + K +  +    V  +A
Sbjct: 284 RFTLADMATSLEAARLILWRAATALDENDPDKVE------LCAMAKKFVTETCFQVADQA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           ++  GG GY+ E  + +  R+   N IL G+   M + +   
Sbjct: 338 LQLHGGYGYLHETGVEKIVRDLRVNRILEGTNEIMRMVIGRA 379


>gi|56418732|ref|YP_146050.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56378574|dbj|BAD74482.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 386

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 134/361 (37%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++ +S   GL        +  +      K      L          + + +      +
Sbjct: 39  QDIIEKSKEMGLFGLSIPEEYGGLGLSMVGKCAIYEELGKTHNGYTTLIGAHTGIGTVGI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             + T    + + PK+ + E+                  LTE   G++ AAI +   +  
Sbjct: 99  VELGTEEQKQRYLPKMATGEW-------------IGAFALTEPSAGSNAAAIKTTAVRKG 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  ++  +  F ++A  +   G   +   + +    G    +++ K+G R
Sbjct: 146 DRYIINGSKHYITNAVDAHVFTVMAVTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLR 205

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
            + + EL F N        L     G V  +KIL       A  ++      L   + YA
Sbjct: 206 GSHSAELFFDNLEVPAENVLGREGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +I+Q  ++  +A++++ I    +  +R+A   D+     +EAA       I
Sbjct: 266 EQREQFGKPIIEQQAIQHMLAEMSMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------I 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++   +   A++  GG GY+++  I R++R++    I  G+       + + L 
Sbjct: 319 AKLFGSEVYNKIADMAVQIHGGLGYMKDYPIERYFRDARITKIYEGTSEIQRNIIASELR 378

Query: 460 K 460
           K
Sbjct: 379 K 379


>gi|304311346|ref|YP_003810944.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium
           HdN1]
 gi|301797079|emb|CBL45292.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium
           HdN1]
          Length = 389

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 143/379 (37%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  +RW++ +       L  ++   GL C      +      + +          +
Sbjct: 34  EEITPFADRWEEQQHID--RNLWNKAGELGLLCPTMPEEYGGSGVDRLYSTILMEEQARS 91

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A      S   A+ +    +  + + W PK+ S E                 + +TE
Sbjct: 92  GDSASGFALHSDIVANYIFNFGSEALKRHWLPKMASGE-------------AVAAIAMTE 138

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLL 262
              G+D+ A+ +      D  Y ++G K F+++   SD  +++A+   G      +  ++
Sbjct: 139 PGTGSDLQAVRTTAIADGDD-YVINGSKIFITNGYLSDVVVVVAKTGSGEKAAQNISLIV 197

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLD 319
            + S  G    +   K+G R   T EL F N        L +   G +  MK L    + 
Sbjct: 198 VEASRAGFTKGKPLKKVGMRGQDTCELFFDNVRVPKTNLLGMEGMGFIMLMKELAWERMM 257

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AI+  +G    LA  + Y ++R   G  +      +  +A++  +I  A     R    
Sbjct: 258 IAIICAAGAEAVLANTVDYVKQRKAFGKPISAFQNTRFKLAEMRAEIQIARVYVDRCLEL 317

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             ++K   E AA A       KYW   +   V+ E ++  GG GY+ E  +AR Y ++ A
Sbjct: 318 VLQSKLSVEAAASA-------KYWVSDLLSKVVDECVQLHGGYGYMLEYPVARAYIDTRA 370

Query: 440 NSILLGSGNAMVLDVLNLL 458
           N I  G+   M   +   +
Sbjct: 371 NRIYGGTNEIMKELISRTI 389


>gi|289622491|emb|CBI51113.1| unnamed protein product [Sordaria macrospora]
          Length = 473

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 75/388 (19%), Positives = 144/388 (37%), Gaps = 32/388 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
               DK    PA   + R     GL     D ++  +    QAH I    L   +   A 
Sbjct: 106 ASETDKSNAFPAH--MWRALGDAGLLGITADEAYGGLSMGYQAHCIVMEELSRASGSIAL 163

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L       + + P + S E                 L ++E   G+
Sbjct: 164 SYAAHSQLCVNQLSLNGNAEQKEKYLPGLISGE-------------KVGALAMSESGSGS 210

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED----- 264
           D+ ++ +  +K+  G        W  + P +D  ++ A+ E   G   +   + +     
Sbjct: 211 DVVSMRTTAKKVEGGYKLNGSKMWITNGPDADVIVVYAKTEPEAGSKGITAFIVETKDLE 270

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                +G    R  +K+G R + T EL F N F     +LG +N     + +   L  L 
Sbjct: 271 TGKKADGFECLRKLDKMGMRGSNTGELVFENVFVPEENVLGKVNGGVRVLMEGLDLERLV 330

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            +   +  M+ +L  A+ YA  R   G  +    +++  +AD+   + A+ A ++  A +
Sbjct: 331 LSAGPLGLMQAALDVALPYAHSRKQFGTPIAQFQLLQGKLADMYTKLQASRAYTYTTAKT 390

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D      E+             +  + A  V  +A++ +GG GY+EE  ++R  R++  
Sbjct: 391 VD------EQGIIKTQDCAGAILYAAERATEVALDAIQILGGMGYMEEMPVSRIMRDAKL 444

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             I  G+     + +     K      +
Sbjct: 445 YEIGAGTSEVRRMVIGRAFNKEYAHLAK 472


>gi|326924088|ref|XP_003208264.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Meleagris gallopavo]
          Length = 433

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 128/353 (36%), Gaps = 23/353 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        +            A+   ++  +E    + P+V     +    T ++
Sbjct: 99  FEQGLMSIELGEEYGGTG--------ASFFSVILAVEELAKVDPTVALMCELQNTLTNKL 150

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +       E       P           L+E   G+D  ++ ++ +K  D       
Sbjct: 151 FTTY-----GTEEQKKTYLPKVSKDTIGSFCLSEAGSGSDAFSLKTRAEKKGDYYIINGS 205

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W   +  +  F ++A  +   G   +   + D    GL   + ++K+G R+++T  + 
Sbjct: 206 KMWITLAEHAGVFFVMANTDPASGYKGITCFIVDRDTEGLHVGKKEDKLGIRASSTCPVT 265

Query: 291 FSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N        LG +         M     +  A   +   +     A+ Y + R   G 
Sbjct: 266 FENVKVPETNILGQIGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGK 325

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D   M+  IA +A  + AA  L++  A   +  K   +EA+ A       KY+  ++
Sbjct: 326 RVFDFQAMQHQIAQVATQLEAARLLTYNAARLAETGKPFIKEASMA-------KYYAAEV 378

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A    ++ +E +GG G+ +   I ++YR+    +I  G+ N  +  +   L +
Sbjct: 379 ATLTTSKCIEWMGGVGFTKNYPIEKYYRDCKIGTIYEGTSNIQLSTIAKSLAQ 431


>gi|157134292|ref|XP_001663227.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108881392|gb|EAT45617.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 424

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 130/377 (34%), Gaps = 25/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK           ++    GL        +  +      H +    +   +   
Sbjct: 65  PFAQEIDKQNEFKDLRNFWKKMGDLGLLGPTVKPEYGGLGGTYLDHCVINEEISRASGAI 124

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 125 SLSYGAHSNLCVNQIHRNGTEEQKQQYLPKLISGEH-------------IGALAMSEAGS 171

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D+ ++ ++ +K  D         W  + P +D +I+ A+ +        +   + +  
Sbjct: 172 GSDVVSMKTKAEKKGDYYVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHGISAFIVERG 231

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIM 323
             G       +K+G R + T EL F +        L      V  +        L  A  
Sbjct: 232 SPGFSRGPKLDKLGIRGSGTCELVFEDVKVPAKNMLGQLNKGVYVLMSGLDYERLVLAAG 291

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+ +   A  YA  R      + +  +++  +AD+   + A  A  + +A S D  
Sbjct: 292 PVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARSCDMG 351

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+  ++             +C + A  V  +A++ +GG+GYI +    R  R++    I 
Sbjct: 352 KANPKD-------CAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRIMRDAKLYEIG 404

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L  
Sbjct: 405 AGTSEVRRMIIGRALNN 421


>gi|19704867|ref|NP_602362.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328947|ref|ZP_06871455.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19712752|gb|AAL93661.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296153936|gb|EFG94746.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 378

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +  +    +    
Sbjct: 52  ALEVPEKYGGPGLKRVDIAALIEEMAIADAGFATTISASGLAMKPVFISGSEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +    +                  LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LVLDGGF--------------GAFCLTEPGAGSDASAGRTTAVKDGDE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMEVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLIRDSKIFQIFEGTNEIQRIVIAN 373


>gi|302343877|ref|YP_003808406.1| butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
 gi|301640490|gb|ADK85812.1| Butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
          Length = 384

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 146/380 (38%), Gaps = 35/380 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH- 150
           ++ +  +  P    ++++    GL        +  +  +            +++  A   
Sbjct: 29  QQVEDEDHIPE--DVVQKMRELGLFGLSIPEEYGGL--ELGTLGECLCYEELSKTNACFR 84

Query: 151 --LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  TP+  + + P + S ++                  LTE   G
Sbjct: 85  SRIGTNNGIGSQGILLDGTPQQKERYLPNLASGQW-------------TACFALTEPEAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           +D A I +  +   D  + L+G K F+++   +D   + A  + +      +   + + +
Sbjct: 132 SDAANIQTTAELKGDH-WVLNGRKHFITNGDIADVATVFAANDRQKKARGGITAFIVEKT 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKIL--IYLDS 320
             G     ++ K+G R + T EL F +        + G+ NV  G    MK L    L  
Sbjct: 191 FPGFYVGTIERKMGLRGSHTCELIFDDCRVPRENVIGGETNVGQGFKTAMKTLDKGRLTM 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++   +  +  +I YA++R   G  + +   ++  +AD+A  I AA  + +  A   
Sbjct: 251 GASALGSAQKLMDLSIAYAKQRVQFGQPIANFQAIQIKLADMATHIYAARQMLYHAAWLR 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D      +  A     A + K +C +MA      A++  GG GY+ +  + R YR+    
Sbjct: 311 D------KRGAAVVKEASMVKLFCTEMANRAADMAVQIHGGMGYVRDFPVERFYRDLRLT 364

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+       +   + K
Sbjct: 365 TIYEGTSEIQRTVIAREILK 384


>gi|119717835|ref|YP_924800.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538496|gb|ABL83113.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 382

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 138/374 (36%), Gaps = 33/374 (8%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEA 148
           V  H  W         + R++   GL C   +  +    V+   + +  A          
Sbjct: 28  VPHHEQWEKDGQVSREVWRKAGEHGLLCFDVEEEYGGAGVKDFRYNMVVAEEMCRVGASG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +      ++ + TP     W P + S E             +   + +TE   G
Sbjct: 88  PGFPVHTDIIVPYISQLGTPEQKARWLPGLVSGE-------------LISAIAMTEPGAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I +      D  Y L+G K F+S+ + SD  I++ + +   G   +  L+ +   
Sbjct: 135 SDLQGIKTTAIDKGDH-YVLNGSKTFISNGILSDLVIVVCRTDPDAGHQGISLLVVERGM 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R  +K+G ++  T EL F          L    +G V  M  L    +  A+M+
Sbjct: 194 KGFERGRNLDKMGMKAQDTAELFFDEVEVPKENLLGAEGSGFVSLMVNLAQERISIAVMA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V+ +   L  ++ YA+ R   G  +      +  +A++A D   A           +  +
Sbjct: 254 VAAIEQMLEVSLSYAKDRQAFGKPIGSFQHNRFLLAEMATDAHIARVFVNDCVLKLNAGQ 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K+W  +    V+ +A++  GG GY+ E  +AR Y +S   +I  
Sbjct: 314 VDPA-------LASMAKWWTTETQKKVVDQAVQLHGGYGYMMEYPVARAYVDSRIQTIYG 366

Query: 445 GSGNAMVLDVLNLL 458
           G+       +   L
Sbjct: 367 GTTEIQKEIIGRSL 380


>gi|28210432|ref|NP_781376.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28202869|gb|AAO35313.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+      + +        ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVEKMAKLGMMGIPIPKEYGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    T    + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCASLIYEHGTEEQKQKYLI-------------PLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   S    + D  Y L+G K F+++  ++D  ++ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQSVAIDMGDH-YLLNGSKIFITNGGVADVAVVFAMTDRSKGTRGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R+++T EL F +        +     G    MK L    +  A  
Sbjct: 190 MPGFSVGKVEDKMGIRASSTTELIFEDVKVPKENLIGKEGRGFGIAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EAI Y + R   G  L     +   +AD+ + I +A  L ++ A      
Sbjct: 250 ALGIAEGALEEAITYMKERKQFGRELYKFQGLSWMMADMKVAIESARLLVYQAAWKKQNK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              SEEAA A++ A         +A  V  + ++  GG GY ++  + R  R++    I 
Sbjct: 310 LPYSEEAAMAKLHAA-------NVAMDVTTKVVQLFGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L +
Sbjct: 363 EGTSQVQQMVISGSLFR 379


>gi|254502174|ref|ZP_05114325.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222438245|gb|EEE44924.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 379

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++R++   GL               +                 
Sbjct: 26  PHAAQWDEDSHFPI--PVMRKAAELGLAGIYVRDDVGGSALTRLDAALIFEELSKGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++       + + + PK+ + E             +     LTE   G
Sbjct: 84  AAYLSIHNMVAWIIDTFGNEDLRQKFLPKLCTME-------------LLTSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ +  +   D  Y L+G K F+S   +SD + ++ +  G  G   +  LL +   
Sbjct: 131 SDAAALRTTAKDDGDH-YILNGSKAFISGGGVSDLYAVMVRT-GDEGPGGISCLLVEKGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G +S  T ++ F +       L+G                 L+    S
Sbjct: 189 PGLSFGANEVKMGWKSQPTAQVNFQDCRVPKSNLIGVEGQGFKIAMAALDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L +AI Y R R   G  L     ++  +AD+A ++ AA  L ++ A   D   
Sbjct: 249 IGPAQECLDQAIAYMRERKQFGKPLTAFQALQFRLADMATELEAARLLLYKAATEVDAKT 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A   A + K         V+ +A++  GG GY+ +  I R  R+   + IL 
Sbjct: 309 PD------APKFAAMAKRLATDTGFKVVNDALQLHGGYGYLRDYPIERFLRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M L +   L K
Sbjct: 363 GTNEVMRLIISRHLLK 378


>gi|56697753|ref|YP_168123.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56679490|gb|AAV96156.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 593

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/537 (18%), Positives = 191/537 (35%), Gaps = 73/537 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGL 115
             L         +E  ++A      L+      G R +  V + P  +     +    G 
Sbjct: 30  AELDADFTGAVLEEAGKIATNVLHPLNIVGDTEGCRLENGVVYTPTGFKEAFEQVKEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +      Q        ++  +          +  +AS +    T      + 
Sbjct: 90  TGLDMPEQYGGQNMPQVIGTAVGEMFSASNQAFTMYQGLTHGAASAILAHGTDAQKDTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K F+
Sbjct: 150 PKMVSCEWTGT-------------MNLTEPHCGTDLGMMRTKAEPQGDGSYKITGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           SS   D       ++LA++ G       V  F+VP+ + +     G+ N +   +++ K+
Sbjct: 197 SSGDHDMADNIVHLVLAKITGGPEGIKGVSLFIVPKFMVNEDGTLGARNAVSVGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + +    G+LLG+ +     +  M     L   +  ++    +   A+ YA
Sbjct: 257 GIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGLAQADAAYQNALEYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               LI  P ++R + D       A A     A   D A   
Sbjct: 317 KDRLQ-GRDVTGVKNPEGPADPLIVHPDIRRNLMDQKSFTEGARAFLLWGATLIDAAHRA 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  
Sbjct: 376 GDKDADGLVSLLTPVIKGFLSDQGYDMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKEDKGLARF 503
           G+     LD++                L  D G        +++        +D+   + 
Sbjct: 436 GANGVQALDLVG-------------RKLAADGGKHVMAFFELVKSFCKENAGQDEAYDKA 482

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
             E   L +++  L  AGM      F++N       + +  L G ++  H+   + L
Sbjct: 483 FIEP--LKAASKDLQAAGM-----YFMQN----GMKNPNNALSGSYDFMHMFGHVCL 528


>gi|186475154|ref|YP_001856624.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191613|gb|ACC69578.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 595

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/481 (20%), Positives = 177/481 (36%), Gaps = 77/481 (16%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALL 107
           H +L+      ++   +E  +        L      G+R       D V   P  +    
Sbjct: 31  HADLD---ADTINQVLEEAGKFC---AEVLFPLNQSGDREGCTYEGDGVVTTPKGFKEAY 84

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-- 165
           ++ +  G      D  F          +  A   ++        M P ++  +   L   
Sbjct: 85  KQYVEAGWPALGCDPDFGGQGLPTF--VNNALYEMLNSANQAWTMYPGLSHGAYECLHAH 142

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            TP + + + PK+ S E+  T             + LTE   GTD+  + ++ +   DG 
Sbjct: 143 GTPELKQAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPKGDGS 189

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNG 269
           Y +SG K F+SS   D       ++LA++         +  F+VP+ + D     G  NG
Sbjct: 190 YAISGTKIFISSGEHDLADNIVHLVLARLPDAPHGTKGISLFVVPKFVPDANGNPGERNG 249

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    +++K+G   NAT  +   N  G+L+G+ N     +  M     L   +  +    
Sbjct: 250 VKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTE 309

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
           V+   ++ YA+ R                  +I  P ++R +         A A ++  A
Sbjct: 310 VAYQNSLIYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSA 369

Query: 378 NSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              D      +   R + A    ++ PI K +    A      AM+  GG G+I E  + 
Sbjct: 370 LHIDKELSHADEAVRKDAADLVALLTPIIKAFLTDNAFEGTNMAMQIYGGHGFIAEWGME 429

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R++  N I  G+ +   LD+L     G             D+G+  KK   ++ D +
Sbjct: 430 QYVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKLVTDFV 476

Query: 492 S 492
            
Sbjct: 477 E 477


>gi|321460436|gb|EFX71478.1| hypothetical protein DAPPUDRAFT_216649 [Daphnia pulex]
          Length = 422

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 130/353 (36%), Gaps = 23/353 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             +GL     D  +            A+ +  +  +E    + P+V+    +       +
Sbjct: 86  FANGLMGLEIDAEYGG--------AGASFMSAIVTIEELAKIDPAVSVFCDIQNTLINTL 137

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +         +       P           L+E   G+D  ++ ++  K  D       
Sbjct: 138 FRK-----LGTQEQKDKYLPKLAQDTVGSFCLSEAESGSDAFSLKTRAIKSDDHYIINGS 192

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  SS ++  ++++A    + G   +   + D    G+   + ++K+G R+++T  + 
Sbjct: 193 KMWISSSEIAGVYLVMANANPKDGYKGITCFIVDQITPGVSIGKKEDKLGIRASSTCAVH 252

Query: 291 FSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N       +LG+L         M     +      V   +      + Y  +R   G 
Sbjct: 253 FDNVQVPASNILGELGQGYKYAIGMLNEGRIGIGAQMVGLAQGCFDATVPYTLQRTQFGK 312

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D   M+  IA +A  I +A  L +  A   +      +EAA A       KY+  ++
Sbjct: 313 RIFDFQAMQHQIAQVATQIESARLLVYNAARLKEAGLPFVKEAAMA-------KYYAAEV 365

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A    ++ +E +GG G+ ++  + + YR+    +I  G+ N  +  +   +E+
Sbjct: 366 ATLTTSKCIEWMGGVGFTKDYPVEKFYRDCKIGTIYEGTSNIQLNTIAKYIEQ 418


>gi|146283538|ref|YP_001173691.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145571743|gb|ABP80849.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 387

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 140/376 (37%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    PA   + ++    GL        +        AH +    +   +   
Sbjct: 31  PRAEAIDQDNLFPA--DMWKKFGEMGLLGVTVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +     P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGNPEQKARYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G       +K+G R + T EL F +        L V  G V+ +  +  LD   + ++G
Sbjct: 196 KGFSRGNKFDKLGMRGSNTCELFFDDVEVPQENVLGVENGGVKVL--MSGLDYERVVLAG 253

Query: 328 -----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                M+  L   + Y   R   G  + +   ++  +AD+   + A+ A  + +A + D 
Sbjct: 254 GPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQACDR 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I
Sbjct: 314 GETTRKDAAG-------VILYTAENATQMALQAIQILGGNGYINEFPTGRLLRDAKLYEI 366

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 367 GAGTSEIRRMLIGREL 382


>gi|83945393|ref|ZP_00957741.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851227|gb|EAP89084.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 594

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 184/492 (37%), Gaps = 70/492 (14%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW-----DK 96
            L  + A                +      E A++AN     L      G++      D 
Sbjct: 13  ALEEVAALDSVNATGAFPEFSSDLTPAILDEAAKLAN---DVLAPINRTGDQQGCTLKDG 69

Query: 97  VEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V   P  +     + +  G     +      +   +A  +  A + ++        + P 
Sbjct: 70  VVTTPDGFKEAYAQFVEGGWQGLQFPTDMGGMGLPKA--LGCALMEMLQSSNMAFGLGPM 127

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  ++ +L+   +      +  KI S E+  T             + LTE   G+D+ A
Sbjct: 128 LSFGAIESLIAVGSEEQRALYLGKILSGEWSAT-------------MNLTEPGAGSDVGA 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL 262
           + ++ +   DG + +SG K +++    D       ++LA+          +  F+VP+ +
Sbjct: 175 LRTKAEPNGDGSWAISGQKIYITWGEHDCAENIIHLVLARTPDGAAGTKGISLFIVPKFI 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
            D     G  N L    L++K+G   + T  +E+    G+LLGD       +  M     
Sbjct: 235 PDADGNPGERNALQAIGLEHKMGIHGSPTCTMEYDGAKGWLLGDEFKGMAAMFIMMNSAR 294

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAA 368
           L+  +  V     +  +A+ YA+ R     I         +I  P ++R +A +   I A
Sbjct: 295 LNVGVQGVGIAERAYQQALAYAKDRKQGRAINMDDHGPHAIIHHPDVRRTLAVMKAKIEA 354

Query: 369 ATALSFRLANSFDEAKSRSEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A+ +  A   D  +   +    A       +M PI K WC  M   V +  ++  GG 
Sbjct: 355 GRAICYHAAVEADLGEHHDDADEKAWSKRREDLMIPIAKAWCTDMGVDVASMGVQVHGGM 414

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           G+IEE   A+H R++    I  G+     +D++                L +D G++  +
Sbjct: 415 GFIEETGAAQHLRDARIAPIYEGTNGIQAIDLVG-------------RKLARDAGTAVGE 461

Query: 483 VITILRDSISLC 494
           +I  +R +I  C
Sbjct: 462 LIEDVRQTIEDC 473


>gi|262196962|ref|YP_003268171.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080309|gb|ACY16278.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 382

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 129/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   HP    L+ R    GL                     A      A    
Sbjct: 26  PKAAEIDREHRHP--KELVARMAELGLMGVAVPEELGGSGMDNVSYALAMEEISRACAST 83

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS  +      +         + +   + S E                   L+E   
Sbjct: 84  GVIMSVNNSLVCDPIMRFGDDAQKRAFLAPLASGE-------------KLGCFALSEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA  +   +  D         W  + P++D  ++ A  +   G   +   +     
Sbjct: 131 GSDAAAQRTTAVRDGDEWVIQGTKNWITNGPVADTMVLFAMTDKEQGHRGISSFIVPMDT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+      +K+G R + + ++   +        L  V  G    M  L    +  A  +
Sbjct: 191 AGVRCGEPDDKLGIRGSKSSQVFLDDARLPASALLGEVGGGFKVAMSTLDGGRIGIAGQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L +A+ Y+  R   G  +     +   +AD+A ++ AA  L+ R A   D  +
Sbjct: 251 LGIARAALEDALDYSLNRKTMGKPIAKHQAISFKLADMATELDAARLLTLRAAYLKDSGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              + AA A       K +   +A     EA++  GG+GY+ E  + RH+R++    I  
Sbjct: 311 PYGKAAAMA-------KLYASDVANRAAREAIQIFGGNGYVTEYPVERHFRDAKITEIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L + N L K
Sbjct: 364 GTSEIQRLVIANHLFK 379


>gi|318056740|ref|ZP_07975463.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318080394|ref|ZP_07987726.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 382

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 133/375 (35%), Gaps = 24/375 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
            GP     D+    P             LH      ++          +           
Sbjct: 28  IGPHAAEVDEQGRFP--QEARDALTAADLHAVHVPENYGGAGADALATVIVIEEVARVCA 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  + + +   +  V +  +  + K +               P+ K        L+E  
Sbjct: 86  SSSLIPAVNKLGSLPVIISGSEELKKKYL-------------GPLAKGDAMFSYALSEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S
Sbjct: 133 AGSDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPGKRSKGISAFVVEKS 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  
Sbjct: 193 DEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQ 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I+AA AL+++ A + +  
Sbjct: 253 ALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKISAARALTYQAAAASERG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A         K +   +A  V  +A++ +GG GY  +  + R  R++    I 
Sbjct: 313 D------ADLTYQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 367 EGTNQVQRIVMARNL 381


>gi|86751041|ref|YP_487537.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574069|gb|ABD08626.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris HaA2]
          Length = 390

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 145/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  +  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRETVRDFASNEIAPRADAIDKTNTFP--RDLWPKLGELGLHGITVEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +    +    + + PK+ S E+  
Sbjct: 70  SGLGYLEHCIAVEEISRASASVGLSYGAHSNLCINQIRRNGSEAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRFVLNGNKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPNAGPRGMTAFLVEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   +  M+  +   + Y   R   G  +    +++  IAD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPLGIMQACMDVVMPYVHERKQFGEPIGTFQLVQAKIADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGQTTREDAAGA-------ILYAAEKATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|281202669|gb|EFA76871.1| acyl-Coenzyme A dehydrogenase [Polysphondylium pallidum PN500]
          Length = 591

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 135/363 (37%), Gaps = 31/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
             LL     +GL        +          I               ++   +    + +
Sbjct: 249 KELLADCFANGLMGIEIPEEYNGTGLNFMSSIIIIEELAKVDPGISVIVDVQNTLINNCI 308

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + + PK+               T +     L+E   G+D  A+ ++  K  
Sbjct: 309 KRYGNDAQKQQYLPKL--------------ATEMVGSFCLSESSSGSDAFALKTRADKQG 354

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D      G  W  ++  +  FI++A V+   G   +   L D +  GL   + ++K+G R
Sbjct: 355 DYYVINGGKAWITNAKEAGVFIVMANVDPSAGYRGITAFLVDRNTPGLEVGKKEDKLGIR 414

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AI 336
           S++T E+ F++         NV     +  KI I  L+   + ++   + LAE      +
Sbjct: 415 SSSTCEVIFNDVKVPAS---NVLGQVGKGYKIAIEGLNEGRIGIAAQMLGLAEGAFESTL 471

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   G  + +   M+   AD+A+DI A   L++  A   +  K    EA+ A   
Sbjct: 472 PYLMQRKQFGKPIAEFQGMQFTYADLAVDIEAGKLLTYNAARLQEAGKPFVTEASMA--- 528

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +C ++A  V +  +  +GG G  +E    +++R+     I  G+ N  +  +  
Sbjct: 529 ----KLYCSRIAEKVSSACITMLGGVGITKEFDAEKYFRDCKVGQIYEGTTNIQLQVIAK 584

Query: 457 LLE 459
            + 
Sbjct: 585 SIM 587


>gi|90075722|dbj|BAE87541.1| unnamed protein product [Macaca fascicularis]
          Length = 371

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 136/369 (36%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 24  ENSKMEKSIIQGLFQQGLMGIEVDPKYGGTGASFLSTVIVIEELAKVDASVAVFCEVQNT 83

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + M+    T      + P++               T       L+E   G+D  A+ +
Sbjct: 84  LINTMIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 129

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   + D    GL   + +
Sbjct: 130 RADKEGDYYVLNGSKMWVSSAEYAGLFLVMANVDPTIGYKGITTFIVDRDTPGLHIGKPE 189

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       +  +        K  I  L+   + ++   + LA+ 
Sbjct: 190 NKLGLRASSTCPLTFENVKVP---EAKILGQVGHGYKYAIGSLNEGRIGIAAQMLGLAQG 246

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 247 CFDYTIPYIKERMQFGKRLFDFQGLQHQVAHMATQLEAARLLTYNAARLLEAGKPFIKEA 306

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 307 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 359

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 360 LNTIAKHID 368


>gi|118587976|ref|ZP_01545386.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118439598|gb|EAV46229.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 379

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 140/376 (37%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+    P     LR++   G                +                 
Sbjct: 26  PFAKEWDEESHFPI--PTLRKAAELGFGGIYVKEDVGGSALTRLDATLIFEELSKGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     A ++    +  + + + P++ +               +     LTE   G
Sbjct: 84  AAYIAIHNMVAWIIDTYGSEDLRQKYLPQLCTM-------------DLLTSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +   D  Y L+G K F+S   +SD + ++ +  G  G   V  LL +   
Sbjct: 131 SDAASLRTSARDDGDH-YILNGSKAFISGGGVSDLYAVMVRTGGE-GPSGVSCLLVEKGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G +S  T ++ F +       L+G                 L+    S
Sbjct: 189 PGLSFGANEVKLGWKSQPTAQVNFQDCRVPKSNLIGSEGQGFKIAMAALDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L  A+ Y + R   G  + D   ++  +AD+A ++ AA  L  + A++ D   
Sbjct: 249 MGAAQACLDHALAYVQERKQFGRPIADFQALQFRLADMATELEAARLLLHKAASAVDAKS 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  +A + K         V+ EA++  GG GY+ +  I R++R+   + IL 
Sbjct: 309 HD------ATKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYPIERYFRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M L +   L K
Sbjct: 363 GTNEIMRLIIARQLLK 378


>gi|66557634|ref|XP_623170.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Apis mellifera]
          Length = 408

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 144/382 (37%), Gaps = 30/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK   +P     +++    GL       +             A           
Sbjct: 50  PLATEIDKKHLYPE--KQVKKMGELGLMSIAIPENLGGTGLDYLAYAIALEEISRGCAST 107

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS         +L   P        K   ++       P    +      L+E   G
Sbjct: 108 GLIMSVHN------SLYLGPIQ------KFGDKDQIKKYITPFTTGTKIGCFALSEPGNG 155

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +             W  ++  SDA I+ A  +       +   + D +  
Sbjct: 156 SDAGAASTIAKLNGSNYLINGTKSWITNAYESDAIILFATTDKSKKHKGISAFIVDKTTE 215

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           GL   + ++K+G   ++T  L F +     L   N+        KI +  LD+  + ++ 
Sbjct: 216 GLFVGKKEDKLGICGSSTCSLIFEDCK---LPKENLLGESGMGFKIAMTTLDAGRIGIAA 272

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     AI YA +R   G  +I    +++ IAD++L + ++  L++R A   D 
Sbjct: 273 QALGIAQASLDCAIEYAAKRQAFGSSIIKLQTIQQKIADMSLRLESSRLLTWRAAALKDN 332

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            KS ++EAA A++ +  T  +C         + M+ +GG GY+ +    R+YR++    I
Sbjct: 333 NKSYTKEAAMAKLSSSETSTFC-------AHQCMQILGGMGYVSDMPAERYYRDARITEI 385

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+     L +   + K  NL
Sbjct: 386 YEGTSEIQRLVIAANVIKEYNL 407


>gi|321311473|ref|YP_004203760.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320017747|gb|ADV92733.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           BSn5]
          Length = 380

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 144/380 (37%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+    P       +    GL    +   +                Y +A  E 
Sbjct: 26  PHAEHVDQTGEFPM--QTFEKMGELGLMGIPFPEEYGGSGGDTIS-------YALAVEEV 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    S  ++ A+ V+L  +P           + E   T+  P+   +     GLTE   
Sbjct: 77  GKACGSTGLSYAAAVSLGASP------LYYFGTEEQKQTHLTPLASGTALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 TPGLTITSPYDKMGVRGSNTAEILLEDVRVPA---ANLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAAYA       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DHNRPFTKEAAYA-------KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   L K
Sbjct: 361 EIGEGTSEIQRLVIARKLLK 380


>gi|163734515|ref|ZP_02141954.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och
           149]
 gi|161392008|gb|EDQ16338.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och
           149]
          Length = 593

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/547 (18%), Positives = 196/547 (35%), Gaps = 76/547 (13%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHA 105
             P   +++LE       S   +E  ++A      L+      G   +   V     + A
Sbjct: 23  RQPIPGYEDLE---ADFTSAILEEAGKLATGVLAPLNTVGDTEGCTLENGVVRTPTGFKA 79

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
              +    G         +               ++  + +        +  +AS +   
Sbjct: 80  AFDQVREGGWPGLDMPEEYGGQNMPCVIGTAVGEMFSSSNMAFTMYQGLTHGAASAILAH 139

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    + + P + S E+  T             + LTE   GTD+  + ++ +  +DG 
Sbjct: 140 GSQAQKETYLPNMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQADGS 186

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNG 269
           Y L+G K F+S+   D       ++LA++ G       V  F+VP+ +       G  N 
Sbjct: 187 YTLTGQKIFISAGEHDMSSNIIHLVLAKIPGGPEGIKGVSLFIVPKFIVKDDGSLGERNA 246

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +   +++ K+G   N+T  + +    G+LLG+ +     +  M     L   +  +S   
Sbjct: 247 VAVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVGMQGMSQAA 306

Query: 330 VSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
            +   A+ YA+ R   G               LI  P ++R++ D    +  A A     
Sbjct: 307 AAYQNALEYAKDRLQ-GRDVTGEKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFMLWG 365

Query: 377 ANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A   D A    ++ A     ++ P+ K +       +  +A +  GG GYIEE  +++  
Sbjct: 366 ATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGYDMTIKAQQVYGGHGYIEEWGMSQFT 425

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL- 493
           R++    I  G+     LD++                L QD G        +++  I   
Sbjct: 426 RDARIAMIYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLVKTYIKDN 472

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
             +D    R   E   L +++  L  AGM      F++N       + +  L G ++  H
Sbjct: 473 AGQDAEYDRAFLEP--LKAASKDLQAAGM-----YFMQN----GMKNPNNALSGSYDFMH 521

Query: 554 IIDSLYL 560
           +   + L
Sbjct: 522 MFGHVCL 528


>gi|319952333|ref|YP_004163600.1| butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319420993|gb|ADV48102.1| Butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 380

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 130/368 (35%), Gaps = 26/368 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+ +  P     +++    G    + D  +        ++ I    L  +    +  +  
Sbjct: 32  DEEQKFP--KEQIKKLGELGFLGMMVDPKYGGSGLDTLSYAIAMEELSKIDASASVVVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      + +       + +  K+ + E                   L+E   G+D  +
Sbjct: 90  NNSLVCWGLEMFANEEQKQKYLTKLATGEM-------------IGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   +  ++++AQ +   G   +  L+ +    G    
Sbjct: 137 QKTTAIDKGDHYLLNGTKNWITNGSTAGVYLVIAQTDIEKGHKGINALIVEKGTPGFEIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             +NK+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRGSDTHSLMFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  + +   +   +AD+  +I AA  L ++ A   D  K+    +
Sbjct: 257 AYELALKYSKERKSFGTEICNHQAIAFKLADMHTEIEAARLLVYKAALDKDNGKNYDLSS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  K+A     EA++  GG+G++++  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASKVAMDTTVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLL 458
            + +   +
Sbjct: 370 KIVISRSI 377


>gi|115379922|ref|ZP_01466980.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|115363073|gb|EAU62250.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
          Length = 332

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 67/336 (19%), Positives = 132/336 (39%), Gaps = 26/336 (7%)

Query: 127 VVRKQAHKIRAARLYL---MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
               +A  +  A   +    A       M+ +     ++    T    + + P++ S E 
Sbjct: 9   YGGSEAGVVAYALAVMELSAACASTSVAMAVTNMCGELINTFGTEAQREKFLPRLTSGE- 67

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                      +V     L+E   G+D  A+ +   +  D        +W  S   +   
Sbjct: 68  -----------AVVGSFALSEAHAGSDPGALRTTAVRQGDQWVLNGSKQWITSGAYAGVM 116

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+  G  G   +   + +G   GL   + ++K+G R + TV L F +        L 
Sbjct: 117 VVWARTSG-TGNKGLSAFIVEGGTKGLHVGKHEDKMGLRGSNTVSLTFEDCHIPADQILG 175

Query: 304 VSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                 +   + +    +  A  +    R +L  A+ Y + RH     + +    +  +A
Sbjct: 176 KEGEGFKLAMVALDGGRIGIASQACGVARAALEAAVRYTKDRHAFNQPVSEFQGPRFMMA 235

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + IAAA  L+FR A   ++ +  + EA+ A       K +  +MA  V  +A++  G
Sbjct: 236 DMKVQIAAAELLTFRAATLKEKGQPFTREASMA-------KLFASEMANRVCDKAVQLHG 288

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GYI+E  + R+YR++   +I  G+     + +  
Sbjct: 289 GYGYIDEFPVERYYRDARVQTIYEGTSEVQRMVIAR 324


>gi|15895968|ref|NP_349317.1| butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|1703066|sp|P52042|ACDS_CLOAB RecName: Full=Acyl-CoA dehydrogenase, short-chain specific;
           AltName: Full=Butyryl-CoA dehydrogenase; AltName:
           Full=SCAD
 gi|15025744|gb|AAK80657.1|AE007768_11 Butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|1055219|gb|AAA95968.1| putative butyryl-CoA dehydrogenase [Clostridium acetobutylicum ATCC
           824]
 gi|325510120|gb|ADZ21756.1| Butyryl-CoA dehydrogenase [Clostridium acetobutylicum EA 2018]
          Length = 379

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 135/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G+    + + +        ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVKKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +   AS++    T    + +               P+ K       GLTE   
Sbjct: 84  GVILSAHTSLCASLINEHGTEEQKQKYL-------------VPLAKGEKIGAYGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GTD  A  +      D         +  +  ++D F++ A  +   G   +   + +   
Sbjct: 131 GTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMTDRTKGTKGISAFIIEKGF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G    +++ K+G R+++T EL F +    +   +     G    MK L    +  A  +
Sbjct: 191 KGFSIGKVEQKLGIRASSTTELVFEDMIVPVENMIGKEGKGFPIAMKTLDGGRIGIAAQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +  EA  Y + R   G  L     +   +AD+ + I +A  L ++ A       
Sbjct: 251 LGIAEGAFNEARAYMKERKQFGRSLDKFQGLAWMMADMDVAIESARYLVYKAAYLKQAGL 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + +AA A++ A         +A  V  +A++  GG GY ++  + R  R++    I  
Sbjct: 311 PYTVDAARAKLHAA-------NVAMDVTTKAVQLFGGYGYTKDYPVERMMRDAKITEIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   + +
Sbjct: 364 GTSEVQKLVISGKIFR 379


>gi|152125905|gb|ABS29300.1| butyryl-CoA dehydrogenase [Fusobacterium necrophorum]
          Length = 303

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/318 (19%), Positives = 124/318 (38%), Gaps = 31/318 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +   +  +    T    + + PK+ S E+                 GLTE   GTD
Sbjct: 9   VSAHTSLGSWPILKFGTEAQKQKYLPKMASGEW-------------IGAFGLTEPNAGTD 55

Query: 211 IAAITSQGQ-KISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
            +   +      +   + ++G K F+++   +  +++ A  +   G   +   + +    
Sbjct: 56  ASGQQTIAVFDEATQEWVINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEAGTP 115

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + + K+G R +AT EL F +     L   N+     +  KI ++ LD   + ++ 
Sbjct: 116 GFSIGKKEKKLGIRGSATCELIFEDVR---LPKENLLGDLGKGFKIAMMTLDGGRIGIAS 172

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + LA     EA+ Y + R   G  L         +A++ + + AA  L ++ A     
Sbjct: 173 QALGLAQGALDEAVQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWKESN 232

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + +AA A       K +  + A  V  +A++  GG GY  E  + R  R++    I
Sbjct: 233 HLPYTVDAARA-------KLFAAETAMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEI 285

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 286 YEGTSEVQRMVISGNLLK 303


>gi|268551861|ref|XP_002633912.1| C. briggsae CBR-IVD-1 protein [Caenorhabditis briggsae]
 gi|187023762|emb|CAP37120.1| CBR-IVD-1 protein [Caenorhabditis briggsae AF16]
          Length = 417

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 134/373 (35%), Gaps = 27/373 (7%)

Query: 95  DKVEFHPAWHAL---LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           DK++    W  L    ++    GL        +        +H I    L   A   A  
Sbjct: 61  DKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSAMNYFSHVIAMEELSRAAGGIALS 120

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S    + +    +    + + PK+ S E+                L ++E + G+D
Sbjct: 121 YGAHSNLCVNQICRNGSKEQKQKYLPKLISGEHMG-------------ALAMSEAQAGSD 167

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + ++  + +K  D         W  + P +D  ++ A+ +       +   L + +  G 
Sbjct: 168 VVSMKLRAEKKGDKYILNGTKFWITNGPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGF 227

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R + T EL F N        +G +      +        L  +   +  
Sbjct: 228 TQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGVGKGVYVLMTGLDYERLVLSGGPLGL 287

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R   G  +    +++  +AD+   + A+ +  + +A + D+    +
Sbjct: 288 MQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNISN 347

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++             +  +    V  +A++ +GG+GYI +    R  R++    I  G+ 
Sbjct: 348 KD-------CAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTS 400

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 401 EVRRLIIGRALNK 413


>gi|333024974|ref|ZP_08453038.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744826|gb|EGJ75267.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 382

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 133/375 (35%), Gaps = 24/375 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
            GP     D+    P             LH      ++          +           
Sbjct: 28  IGPHAAEVDEQGRFP--QEARDALTGADLHAVHVPENYGGAGADALATVIVIEEVARVCA 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  + + +   +  V +  +  + K +               P+ K        L+E  
Sbjct: 86  SSSLIPAVNKLGSLPVIISGSEELKKKYL-------------GPLAKGDAMFSYALSEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S
Sbjct: 133 AGSDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPTKRSKGISAFVVEKS 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  
Sbjct: 193 DEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQ 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I+AA AL+++ A + +  
Sbjct: 253 ALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKISAARALTYQAAAASERG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A         K +   +A  V  +A++ +GG GY  +  + R  R++    I 
Sbjct: 313 D------ADLTYQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 367 EGTNQVQRIVMARNL 381


>gi|294784841|ref|ZP_06750129.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
 gi|294486555|gb|EFG33917.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_27]
          Length = 378

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +  +    +    
Sbjct: 52  ALEVPEKYGGPGLKRVDIAALIEEMAIADAGFATTISASGLAMKPVFISGSEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +    +                  LTE   G+D +A  +   K  +  Y L+G K F++
Sbjct: 112 LVLGGGF--------------GAFCLTEPGAGSDASAGRTTAVKDGNE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|50083856|ref|YP_045366.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49529832|emb|CAG67544.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 596

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/520 (17%), Positives = 187/520 (35%), Gaps = 56/520 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWDK--VEFHPAWHALLRRS 110
            ++ L  +         +E+A+ A   T  L       G  +D+  V     +    ++ 
Sbjct: 30  ANENLAHIDAATAEAILEEMAKFAQNVTSPLNRTGDEEGAHYDQGQVTTPAGFKDAFQQY 89

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   +    +   
Sbjct: 90  AQGGWIGLGADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALNSYASQEQ 149

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G
Sbjct: 150 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNVDGSYHITG 196

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 197 TKIFITGGDHDLSQNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNAVGPGS 256

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    GFL+G  N     +  M     L   I  +     +   
Sbjct: 257 IEHKMGIKASATCVMNFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 316

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 317 AAQYATDRLQGRSASGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                + ++  +      ++ PI K +    A     +A  C GG GYI E  + +  R+
Sbjct: 377 TKFSTDPEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMCFGGHGYIREWGMEQCVRD 436

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+      D++    ++ G     +  S +     + G  +  I   ++   
Sbjct: 437 LRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYISEIRDFTNTLGADLNFIKDATLDAA 496

Query: 495 KEDKGLARFLTEKIALAS----SAAALYRAGMNDIADVFL 530
            E + + +F+ E+ A ++    +AA  Y   +  ++  ++
Sbjct: 497 TEVEAITQFIIEQAAESAEFPNAAAVDYLHAVGLLSFAYM 536


>gi|300310260|ref|YP_003774352.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073045|gb|ADJ62444.1| acyl-CoA dehydrogenase oxidoreductase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 382

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 139/391 (35%), Gaps = 27/391 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ R A  +  Q     P    WD+    PA    L+     G         +       
Sbjct: 8   EMIRDAMRHFAQ-ERLLPFAADWDRNHTFPA--EALKELAELGAMGMCVPEQWGGAGMDY 64

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
              + A             ++S   + A  +     +P   + W               P
Sbjct: 65  MSLVLALEEIAAGDGATSTIVSVQNSLACGITEKYGSPTQKEQWLK-------------P 111

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           + +  +     LTE   G+D AAI ++ ++  D        ++  S   +   I+ A  +
Sbjct: 112 LARGEMLGCFCLTEPHTGSDAAAIRTRAERDGDDFILNGTKQFITSGKHAGVAIVFAVTD 171

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPV 309
              G   +   L      G    R + K+G  ++ TV++   N        L     G  
Sbjct: 172 RSAGKKGISCFLVPCDTPGFVVGRSEEKMGQHASDTVQIMLDNCRVPATALLGKEGEGYR 231

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             +  L    +  A  SV   R +   A+ YAR+R   G  +I+   +   +AD+   + 
Sbjct: 232 IALSNLEAGRIGIAAQSVGMARAAFEAAVSYARQRESFGVPIIEHQAVNFRLADMNTLLD 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + +R A   D+ +   +EA+ A++       +  + A  + ++A++  GG GY  +
Sbjct: 292 AARLMVWRAAQLKDQGRPCLKEASMAKM-------FASEAAEKIASDAIQIHGGVGYTSD 344

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R YR+     I  G+ +   L +   +
Sbjct: 345 FPVERIYRDVRICQIYEGANDIQRLVIGRAI 375


>gi|291008274|ref|ZP_06566247.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 386

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 128/396 (32%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +  R A     +     P     D+ E +P     L   +  G         +       
Sbjct: 16  DALREAVRALAE-KEIAPFAAEVDEQERYP--REALDALVKSGFAAVHVPEEYGGQGADS 72

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                           +  + + +      + L  +  +       + S E         
Sbjct: 73  VATCIVIEEVARVCASSSLIPAVNKLGTMPIILSGSEELKHKVLSSVASGE--------- 123

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                     L+E+  G+D  A+ ++ +   D         W  +  +S  + ++A  E 
Sbjct: 124 ----TTASYALSEREAGSDAGAMKTRARLDGDHWVLNGTKCWITNGGVSKWYTVMAVTEP 179

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +          G      + K+G + + TVEL F +          +   P   
Sbjct: 180 DKGANGISAFAVHADDPGFTVGPKEKKLGIKGSPTVELYFEDCTIPAD---RIIGEPGTG 236

Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  +  LD    ++    + +A+     A+ Y + R   G  + D   ++  +AD+A+ 
Sbjct: 237 FKTALRTLDHTRPTIGAQALGIAQGALDAALDYVKERKQFGKAISDFQGVQFMLADMAMK 296

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  + +  A   +  +           ++   K +   +A  V  +A++  GG+GY 
Sbjct: 297 IEAARHMVYVSAARAERGEGN------LGFISAAAKCFASDVAMEVTTDAVQLFGGAGYT 350

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +  + R  R++    I  G+     + +   L KG
Sbjct: 351 RDFPVERMMRDAKITQIYEGTNQIQRMVMSRALLKG 386


>gi|294141872|ref|YP_003557850.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293328341|dbj|BAJ03072.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 385

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 149/400 (37%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   ++ A +A      +L    P   +WD+    P    +++R+   G       
Sbjct: 2   DFNLSDDQRQFADLAQQFSQDELA---PFAAQWDREHHFP--KDVIQRAGELGFCSLYSP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +           M       +++    +  MV    +  + ++W+  + + 
Sbjct: 57  ESEGGMGLSRLDSSIIFEQLAMGCTSTTAMLTIHNMATWMVTSFGSETLRQEWSELLTTG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A++ ++  +  D  Y +SG K F+S   + 
Sbjct: 117 -------------QKLASYCLTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGAT 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++    G+ G   +  ++      G+ Y + ++K+G  +  T E+ FS     +   
Sbjct: 163 ELLVVMCRTGQDGPKGISAIVVPADAKGVTYGKAEDKMGWNAQPTREITFSEVRVPVTNL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++ A  SV   + +L  A  Y   R   G  +     ++  
Sbjct: 223 LGEEGQGFTFAMKGLDGGRINIATCSVGTAQAALERATQYMTERKQFGKPIATFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D           A     + K +   +   V   A++ 
Sbjct: 283 LADMATELVAARQIVRLAAFKLDCGDPE------ASAYCAMAKRFATDIGFQVCDAALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI E  + RH R+   + IL G+   M L +   L
Sbjct: 337 HGGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIIARRL 376


>gi|16078887|ref|NP_389708.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309717|ref|ZP_03591564.1| hypothetical protein Bsubs1_10061 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314039|ref|ZP_03595844.1| hypothetical protein BsubsN3_10002 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318961|ref|ZP_03600255.1| hypothetical protein BsubsJ_09916 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323235|ref|ZP_03604529.1| hypothetical protein BsubsS_10037 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669137|sp|O34421|ACDC_BACSU RecName: Full=Probable acyl-CoA dehydrogenase YngJ
 gi|2266423|emb|CAA74221.1| yngJ [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634209|emb|CAB13709.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 380

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 145/380 (38%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+    P      ++    GL    +   +                Y +A  E 
Sbjct: 26  PHAEHVDQTGEFPM--QTFKKMGELGLMGIPFPEEYGGSGGDTIS-------YALAVEEV 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    S  ++ A+ V+L  +P           + E   T+  P+   +     GLTE   
Sbjct: 77  GKACGSTGLSYAAAVSLGASP------LYYFGTEEQKQTHLTPLASGTALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 TPGLTITSPYDKMGVRGSNTAEILLEDVRVPA---ANLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAAYA       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DHNRPFTKEAAYA-------KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   L K
Sbjct: 361 EIGEGTSEIQRLVIARQLLK 380


>gi|297194020|ref|ZP_06911418.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722830|gb|EDY66738.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 127/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   L       S+          +            +
Sbjct: 33  PFAAAVDEEARFP--QEALDALVASDLQAVHVPESYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEELKKKYL-------------GPLAKGDAMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +    
Sbjct: 138 SDAAGMKTKAVRDGDFYVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKGDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + +   ++  +AD+A+ I AA  L++  A   +    
Sbjct: 258 GIAQGALDYAKGYVKERKQFGKPIAEFQGVQFMLADMAMKIEAARQLTYAAAAKSERGD- 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 317 -----ADLTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|300313303|ref|YP_003777395.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300076088|gb|ADJ65487.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 591

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/523 (19%), Positives = 183/523 (34%), Gaps = 72/523 (13%)

Query: 28  PPLFIGMNAYSSDSLLVA--LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85
            P      A+  D +L A  ++   P+    +    G+ ++    +E  R A      L+
Sbjct: 6   APPLRDF-AFVLDEVLQAPQVLRALPAHAEID----GDLMM-QVLEEAGRFAADVVAPLN 59

Query: 86  AY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
                 G R+    V   P +     +    G                  H +  A   +
Sbjct: 60  GIGDREGCRFKNGTVTTPPGFERAYAQFCAGGWPALACAPEHGGQGLP--HVLDCALYEM 117

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           ++    G  M P +   +   L    +  +   +  KI S E+                +
Sbjct: 118 LSAANHGWTMYPGLLHGAYACLAAHGSAALQARYLDKIASGEW-------------LATM 164

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
            LTE + G+D+  + ++     DG Y LSG K F+S    D       ++LA++      
Sbjct: 165 CLTEAQAGSDLGQLRTRAVPQDDGSYRLSGDKIFISGGEHDLTPNIVHLVLARLPDAPAG 224

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FL PR+L+DGS NG+    +++K+G   +AT  L F     +L+G+       +
Sbjct: 225 SKGLSLFLAPRVLDDGSRNGVHCTGIEHKMGIHGSATCSLHFEQAQAWLVGEAGRGLAAM 284

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADI 362
             M     L      +     +   A  YAR R  S          ++  P +++ + + 
Sbjct: 285 FVMMNAARLHVGAQGLGLAEAAYQRASAYARERRQSRAPGSSGNDLIVHHPAVQKLLMEQ 344

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAM 416
              I  A  L+       D A+   E A           + P+ K +         + A+
Sbjct: 345 RCRIEGARLLTCWAGLLLDLAEHDPEAALRSRHHERLEFITPVIKAFLTDQGFQCASRAL 404

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +  GG GY+ E  I +  R++    I  G+     +D L                + + L
Sbjct: 405 QVFGGHGYVVETGIEQFMRDARITMIYEGTNEIQAIDFL----------------MRKVL 448

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
           G  G++    L D + L + D   A  L E+  L   A    R
Sbjct: 449 GDEGRR----LDDFLGLVRADIAEASGLGEQARLLGEAVDKLR 487


>gi|116748700|ref|YP_845387.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697764|gb|ABK16952.1| isovaleryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 394

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 131/370 (35%), Gaps = 21/370 (5%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMS 153
           D+  F P +     +    G+     D  +  +      +  A   +  +         +
Sbjct: 33  DEDWFPPDFFK---KCAEIGILGITIDEKYGGLGGDVLMQTLAVEQMSRICPALGMTYGT 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    + +    +  + + + P + + E                 LGLTE   G+D   
Sbjct: 90  HSNLCMNNIHRNASEALKEKYLPSMVAGE-------------KIGALGLTEPNAGSDAMG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++  +  D         +  + P++D  ++ A+ +   G   +   + +    G    
Sbjct: 137 LRTRAVRKGDKYILNGTKMFITNGPVADVLLVYAKTDPERGAKGISAFIVEKEFPGYKVS 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R   K G R + T EL F +       L+G+ N     V     +  +  A  S+   + 
Sbjct: 197 RKLKKCGMRGSPTGELVFEDCEVPAENLVGEENKGVNVVTSGLDIERIVLAGGSLGMAQQ 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  +I Y+  R   G  +    ++++ +AD+     AA  L ++ A        R  + 
Sbjct: 257 ALDYSIRYSVEREQFGRPIASFQMIQQKLADMYARTEAAKLLVYKAAQ-VARNSPRGGKG 315

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                +A     +  + A  V  +A++  GG GY  E  + + +R++    I  G+    
Sbjct: 316 TELTKLAAAGILFAAETATWVCDQAVQIHGGYGYCLEFPVQKLWRDAKLYEIGAGTSEIR 375

Query: 451 VLDVLNLLEK 460
            L V   L +
Sbjct: 376 RLIVARELTR 385


>gi|261418517|ref|YP_003252199.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319765331|ref|YP_004130832.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261374974|gb|ACX77717.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317110197|gb|ADU92689.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 386

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 134/361 (37%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++ +S   GL        +  +      K      L          + + +      +
Sbjct: 39  QDIIEKSKEMGLFGLSIPEEYGGLGLSMVGKCAIYEELGKTHNGYTTLIGAHTGIGTVGI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             + T    + + PK+ + E+                  LTE   G++ AAI +   +  
Sbjct: 99  VELGTEEQKRRYLPKMATGEW-------------IGAFALTEPSAGSNAAAIKTTAVRKG 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  ++  +  F ++A  +   G   +   + +    G     ++ K+G R
Sbjct: 146 DRYIINGSKHYITNAVDAHVFTVMAVTDPSKGPKGITSFIVEKDFPGFIVGNVERKMGLR 205

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
            + + EL F N    +   L     G V  +KIL       A  ++      L   + YA
Sbjct: 206 GSHSAELFFDNLEVPVENVLGKEGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +I+Q  ++  +A++++ I    +  +R+A   D+     +EAA       I
Sbjct: 266 EQREQFGKPIIEQQAIQHMLAEMSMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------I 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++   +   A++  GG GY+++  I R++R++    I  G+       + + L 
Sbjct: 319 AKLFGSEVYNKIADMAVQIHGGLGYMKDYPIERYFRDARITKIYEGTSEIQRNIIASELR 378

Query: 460 K 460
           K
Sbjct: 379 K 379


>gi|145579859|pdb|2JIF|A Chain A, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579860|pdb|2JIF|B Chain B, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579861|pdb|2JIF|C Chain C, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
 gi|145579862|pdb|2JIF|D Chain D, Structure Of Human Short-Branched Chain Acyl-Coa
           Dehydrogenase (Acadsb)
          Length = 404

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 31/369 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 57  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 116

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 117 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 162

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 163 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 222

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 223 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 279

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA
Sbjct: 280 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEA 339

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 340 SMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 392

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 393 LNTIAKHID 401


>gi|21717403|dbj|BAC02934.1| acyl-CoA dehydrogenase A [Acinetobacter sp. M-1]
          Length = 622

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/519 (17%), Positives = 191/519 (36%), Gaps = 58/519 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G RW+  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKEAFRQYAD 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   +    +    +
Sbjct: 89  GGWIGLGADEEWGGQAMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL--ED---GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L  ED   G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLLNEDRSLGERNPVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  +      G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNSDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA  R                  ++    ++R + ++  +  A+ A +  +    D  K
Sbjct: 316 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++  A         ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAEAVKQANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           E + + +F+ E+ A      +SAA  Y   +  ++  ++
Sbjct: 495 EIEAITQFIIEQAAENVDFPNSAAVDYLHAVGLLSFAYM 533


>gi|159043391|ref|YP_001532185.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911151|gb|ABV92584.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 592

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/538 (18%), Positives = 197/538 (36%), Gaps = 76/538 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           + L          E  ++A      L+      G   +   V     +    +     G 
Sbjct: 30  DELDRDFTGAVLDEAGKLAMEVLHPLNTVGDQQGCVLENGVVRTPEGFKDAYKIMCDGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +         +     ++  A +        +  + S +A   + +    + 
Sbjct: 90  TGLDMDPEYGGQGMPYILQTATGEMFSAANMAFQMYNGLTHGAMSALAEHGSDQQKATYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ +  +  T             + LTE + GTD+  I ++ +   DG Y ++G K ++
Sbjct: 150 PKMIAGNWTGT-------------MNLTEPQCGTDLGLIRTKAEPQEDGSYAITGQKIWI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       +  F+VP+ L +     G+ N +    L++K+
Sbjct: 197 SAGEHDMSENIIHLVLAKIPGGPEGVKGISLFIVPKFLVNDDGSLGARNAVSCGGLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    GFL+G+++     +  M     L  A+   +   ++   A+ +A
Sbjct: 257 GIHGNATCVMNYDGATGFLVGEMHKGLRAMFTMMNEARLSVALQGYAQGDIAYQNALGFA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           R R   G               +I  P ++R + D    +  A AL F  A   D+A   
Sbjct: 317 RDRLQ-GRDITGAQAPNKPADPIIVHPDVRRNLMDQKSFVEGARALVFWGATLIDQAHRC 375

Query: 387 --SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +E  A   ++ P+ K +           A + +GGSG+  E  + +  R++    I  
Sbjct: 376 KDAEADAMISLLIPVMKGFLTDKGFETTVLAQQTLGGSGFTREWGLEQFVRDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LCKEDKGLARF 503
           G+     LD++                  + LG +G K +    D +    KE++  A  
Sbjct: 436 GTNGIQSLDLVG-----------------RKLGLNGGKTVMAFFDMVKTFLKENEDNAEL 478

Query: 504 LTEKI-ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            +  +  L +++  L  AGM  ++D            + +  L G ++  H+   + L
Sbjct: 479 KSGFLDPLKAASKDLQAAGMYFMSD---------GMKNPNNALSGSYDFMHLFGHVCL 527


>gi|327301089|ref|XP_003235237.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326462589|gb|EGD88042.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 431

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 140/390 (35%), Gaps = 24/390 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R D+    P    + ++    G      +  +  +    QAH
Sbjct: 59  EFAKREIPE-----EVAARTDQQNQFP--PEMWKKFGEAGFLGVTAEEKYGGLGMGYQAH 111

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            I    L   +   A    + S    + + L  +P   + + P + S E           
Sbjct: 112 CIVMEELSRASGSIALSYAAHSQLCVNQLCLNGSPEQKERFLPGLISGE----------- 160

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++ ++ + +  G        W  + P +D  ++ A+ E   
Sbjct: 161 --KIGALAMSEHSAGSDVVSMKTKAKAVDGGFVLNGTKMWITNGPDADFIVVYAKTEPDA 218

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G   +   + +    G    R  +K+G R + T EL F +       +LG +N     + 
Sbjct: 219 GSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFVPHANVLGQINKGVRVLM 278

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+  L   + Y   R   G  +    +++  +AD+   +AA+ 
Sbjct: 279 EGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGMPIAHNQLIQGKLADMYTKLAASR 338

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++  A   D++   S+              +  + A     +A++ +GG+GYI E   
Sbjct: 339 AFTYNTARQVDQSAISSDGTQVKTQDCAGAILYAAERATECSLDAIQLMGGNGYINEIPA 398

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++    I  G+     + +     K
Sbjct: 399 GRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 428


>gi|298487195|ref|ZP_07005244.1| Isovaleryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158219|gb|EFH99290.1| Isovaleryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 433

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 77  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 134

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 135 ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 181

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ + +     +   + +   
Sbjct: 182 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDW 241

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F N        L V  G V  +   +  +  ++S   
Sbjct: 242 KGFSRGSKFDKLGMRGSNTCELFFDNVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 301

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 302 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 361

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 362 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 414

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 415 GTSEIRRMLIGRELFNETR 433


>gi|253559433|gb|ACT32397.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens]
          Length = 598

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/488 (19%), Positives = 177/488 (36%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIW 120
            ++S   +E AR        L+      G  +D  V   P  +     + +  G H    
Sbjct: 36  DMVSAILEEGARFCENVLAPLNRSGDEEGCHFDNGVVTTPTGFKQAFAQYVEGGWHGLAA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   +    G     +  + S +    T    + +  K+ +
Sbjct: 96  DPAYGGQGLPSSLGLVISEMIGSSNTSWGMYPGLTHGAMSAIHAHGTAEQKQTYLSKLTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  I ++    +DG Y +SG K F+S+   
Sbjct: 156 GQWTGT-------------MCLTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEH 202

Query: 241 DA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G+ NG+    +++K+G +++
Sbjct: 203 DMSDNIIHLVLAKLPDAPAGTKGISLFIVPKFLPDATGEAGARNGVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  L F    GFL+G+ N     +  M     L + +  +     S   AI YA  R  
Sbjct: 263 ATCVLNFDGAKGFLIGEPNKGLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
                           +I  P ++R +  +        AL++  A   D A    +E A 
Sbjct: 323 MRALTGPKAPEKVADPIIVHPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSPDETAR 382

Query: 392 -----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +       V    M+  GG G+I E  + +  R+     I  G+
Sbjct: 383 QEAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + +   ++ +     L D ++           L
Sbjct: 443 NGIQALDLLGRKVLGSQGRLLRGFTKIVHKFCAANAEH--PQLDDYVAQLDGLNQQWGEL 500

Query: 505 TEKIALAS 512
           T ++ +A+
Sbjct: 501 TTRVGMAA 508


>gi|167746635|ref|ZP_02418762.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662]
 gi|317471462|ref|ZP_07930814.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167653595|gb|EDR97724.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662]
 gi|316901077|gb|EFV23039.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 378

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 139/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  A +L +       N    Q   +   GE          W   +  ++I   LH
Sbjct: 2   AYLISEEANDLLQDVREFCENEVKEQCKEFDRSGE----------WPKEIYDKAIEMQLH 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +      +           +A       +S S      V +       K    
Sbjct: 52  SLEVPEEYGGPGLSRVDVAALIEEMAIADAGFATTISASGLGTKPVLIAGNEEQKKHVCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +I    +                  LTE   G+D  A T+   K  D  Y L+G K F++
Sbjct: 112 QIIEGGF--------------GAFCLTEPGAGSDAGAGTTTAVKDGDE-YILNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +   L D    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGGIASFYCITAMTDKSKGVKGISMFLVDAGTPGLSTGNEEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++    +  + EAI Y + R   G  +I  
Sbjct: 217 IPAKNLIGAEGKGFGIAMKTLDQARAWMGCVAAGIAQRGINEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+A+    A  +        D   S S+EAA       I K +   +A  V 
Sbjct: 277 QALQFKIADMAIKTETARQMVAHALTRMDLGLSHSKEAA-------IAKCYASDIAMEVA 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  GS     + + N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLLRDAKIFQIFEGSNEIQRIVIAN 373


>gi|254454294|ref|ZP_05067731.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198268700|gb|EDY92970.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 591

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/540 (18%), Positives = 191/540 (35%), Gaps = 75/540 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIH 112
                L          E  ++A+     L+A     G   +   V     +     +   
Sbjct: 27  PGFADLDRDFTDAVLTEAGKLASEVLAPLNAVGDKQGCSLENGVVRTPDGFKDAYDKMSE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G         +            A    + A +        +  + S +    T     
Sbjct: 87  GGWMSMDLAEEYGGQGLPYIMHTAAMEPMVSANMAFNMYPGLTHGNISAIVTHGTDAQKA 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ + E+  T             + LTE   GTD+  + ++     DG Y +SG K
Sbjct: 147 MYLPKMATGEWSGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGTYKISGQK 193

Query: 233 WFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            ++S+   D       ++LA++ G       +  F+VP+ +       G  N L    L+
Sbjct: 194 IWISAGEHDLSDNIIHLVLAKIPGGPDGVKGISLFIVPKFMVHEDGSLGERNALSCGGLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   NAT  + +    G+L+G+++     +  M     L   +   +   V+   A+
Sbjct: 254 EKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMMNEARLGVGLQGYAQGAVAYENAL 313

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +AR R                  +I  P ++R + D    +  A AL++  A   D + 
Sbjct: 314 GFARDRLQGRAVTGVEAPDKPADPIIVHPDVRRNLMDQKSFVEGARALTYWGATLMDRSH 373

Query: 385 SRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +E A A I  M P+ K +           A + +GGSG+ +E  + +  R++    I
Sbjct: 374 KNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTLGGSGFTQEWGLEQFVRDARITMI 433

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC-KEDKGLA 501
             G+     LD++                  + LG +G K +    + I     ++KG A
Sbjct: 434 YEGTNGIQALDLVG-----------------RKLGLNGGKTVMAFFEIIKTYIADNKGDA 476

Query: 502 RFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            F  + +  L  ++  L  AGM           F+ N  + +  L G ++  H++  + L
Sbjct: 477 AFEADFLEPLKEASKDLQAAGM----------YFMQNMKNPNDALSGSYDFMHMMGHVCL 526


>gi|325124095|gb|ADY83618.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 375

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 127/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  AI ++  K  D        ++  S   +   I+ A  +   G   +   L      
Sbjct: 130 SDAGAIKTRAVKDGDDYILNGAKQFITSGDNAGVIIVFAVTDPSAGKKGISAFLVPRETP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R++ K+G  ++ T ++  ++       +LG                 +  A  +V
Sbjct: 190 GYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQAV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  + 
Sbjct: 250 GLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  G
Sbjct: 310 CLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   L
Sbjct: 363 TSDIQRLVIARSL 375


>gi|262281354|ref|ZP_06059135.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257180|gb|EEY75917.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 375

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 135/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLAQMGQLGFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAALKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQAIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+++  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLKDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|85706101|ref|ZP_01037196.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85669265|gb|EAQ24131.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 582

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/494 (19%), Positives = 180/494 (36%), Gaps = 67/494 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +     +    G         F               ++  A          + 
Sbjct: 61  VRTPKGFKEAFEQMKAGGWTALDLPEEFGGQYMPYILGTAVGEMFSAANQAFTMYQGLTH 120

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +AS + +  T      + PK+ + E+  T             + LTE   GTD+  + S
Sbjct: 121 GAASAILVHGTDDQKATYLPKMANCEWTGT-------------MNLTEPHCGTDLGLMRS 167

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED- 264
           + +   DG Y ++G K F+SS   D       ++LA++ G       V  F+VP+ +   
Sbjct: 168 KAEPQGDGSYKITGQKIFISSGEHDMADNIIHLVLAKIPGGPEGIKGVSLFIVPKFIVKE 227

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+   +++ K+G   N+T  + +    G+LLG+ +     +  M     +  
Sbjct: 228 DGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEHKGMRAMFTMMNEARIGV 287

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  ++   V+   A+ YA+ R                  LI  P ++R++ D    I  
Sbjct: 288 GMQGLAQAEVAYQNALAYAKDRLQGRAVTGAENPNGPADPLIVHPDIRRSLMDQKSFIEG 347

Query: 369 ATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A A     A   D +    + AA     +M P+ K +       +   A +  GG GYIE
Sbjct: 348 ARAFMLWGAELIDRSHRGDDAAAEGLISLMTPVIKGFLTDEGYDMTVLAQQVYGGHGYIE 407

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  +++  R++    I  G+     LD++                L QD G        +
Sbjct: 408 EWGMSQFTRDARIAMIYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFDL 454

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           ++   +  KE++G     ++ +    +A+   +A     A  F++N       + +  L 
Sbjct: 455 VK---TFLKENEGNDALKSDFLDPLKAASKDLQAS----AMFFMQN----GMKNPNAALS 503

Query: 547 GRFNAAHIIDSLYL 560
           G ++  H+   + L
Sbjct: 504 GSYDFMHLFGHVCL 517


>gi|29831569|ref|NP_826203.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29608685|dbj|BAC72738.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 385

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 131/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH      S+          +          + +
Sbjct: 33  PYAAAVDEEARFP--QEALDALVANDLHAVHVPESYGGAGADALATVIVIEEVARVCVSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +              +P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEDLKKRYL-------------SPLAKGDAMFSYALSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +SD + ++A  +       +   + + +  
Sbjct: 138 SDAAGMKTRAVRDGDSYVLNGVKRWITNAGVSDYYTVMAVTDPTKRSKGISAFVVEKADE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +    
Sbjct: 258 GVAQGALDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKIEAARQLTYAAAAKSERGDK 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|83312698|ref|YP_422962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947539|dbj|BAE52403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 378

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 129/374 (34%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    P     +      G    +    ++           A           
Sbjct: 24  PNAARWDREHLFPT--DAIAEMGELGFLGMVVPSEWDGAGTDYVSYAMAVMEIAAGCGPL 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   M  L   T     ++               PM +        LTE   
Sbjct: 82  STIMSVHNSVGCMPILTYGTEAQKDEFL-------------RPMARGEKLGCFCLTEPEA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A+I ++ ++  D        ++  ++      I+ A  + + G   +   +     
Sbjct: 129 GSDAASIRTRARRDGDHYVLSGAKQFISTAKNGQVAIVFAVTDPQAGKRGISAFVVPTDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R+++K+G   + T +L F +        LG+                L  A  S
Sbjct: 189 PGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASRRLGEEGDGLKIALANLEGGRLGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L  A+ YA+ R   G  + +   +   +AD+A  +  A  +    A+  D   
Sbjct: 249 VGMARSALDHALAYAKERKQFGKPIFEHQAVAFRLADMATRVEVAEQMVLHAASLRDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +  +MA  V ++A++  GG GY+ +  + R YR+     I  
Sbjct: 309 PCLKEASMA-------KLFASEMAERVCSDAIQIHGGYGYLADFPVERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVISRAL 375


>gi|126461643|ref|YP_001042757.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126103307|gb|ABN75985.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 591

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/527 (19%), Positives = 188/527 (35%), Gaps = 71/527 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           S   +E  ++A      L+      G R +   V     +     +    G      D  
Sbjct: 38  SAVLEEAGKLARDVLAPLNRVGDMQGCRLENGVVRTPEGFAEAFAQLKEGGWTALDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +         +     +++ A +        +  + S +    T    + W PK+ S ++
Sbjct: 98  YGGQGLPYVMQTAVGEIFVSANMAFNMYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+  G       V  F+VP+ L +     G  N +   ++++K+G   NAT 
Sbjct: 205 ENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--- 344
            L +    G+LLG+L+     +  M     L   +   +    +   A+ YAR R     
Sbjct: 265 VLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNAVAYARDRLQGRS 324

Query: 345 -SGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
            SG          LI  P ++R + D    +  A AL+F  A   D +  + +  A    
Sbjct: 325 LSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLI 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           A +  GG GY+EE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           ++                  +     GK  +   +   S  KE++  AR       L  +
Sbjct: 445 LVG----------------RKLAAEGGKPAMAFFQMIRSFLKENEEDARLKGFLEPLKQA 488

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +    +A M      F          +    L G ++   ++  L L
Sbjct: 489 SKDTQKAAM------FFA---EKGMKNPDEALAGSYDFMTMMGHLCL 526


>gi|291563714|emb|CBL42530.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SS3/4]
          Length = 378

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 139/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM----ANYNTPQL-HAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +      +    +    Y   GE          W  A+  +++  G  
Sbjct: 2   AYLISEEAQDLLQDVKNFCDKEVAEQCKEYDVSGE----------WPKAIYDKAVEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S      V +  +    +    
Sbjct: 52  ALEVPEEFGGPGLSRVDVAALIEQMAIADAGFATTISASGLGMKPVLIAGSDEQKQHVCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I    +                  LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LILDGGF--------------GAFCLTEPGAGSDASAGKTTAVKDGDE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +   L D    GL     +NK+G R++ T ++ F +  
Sbjct: 157 NGGVASFYCVTAMTDKSKGVKGISMFLVDAGTPGLSTGHEENKMGIRTSNTCDVVFEDCR 216

Query: 296 GFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++    +  + EA+ Y + R   G  +I  
Sbjct: 217 IPAANLIGEEGKGFGIAMKTLDQARAWMGCVATGIAQRGINEAVAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+ +    A  +        D     ++E+A       I K +   +A  V 
Sbjct: 277 QALQFKVADMEIKTETARQMVAHALTKMDMGLPYTKESA-------IAKCYASDIAMEVA 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + V N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLLRDAKIFQIFEGTNEVQRIVVAN 373


>gi|134100118|ref|YP_001105779.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912741|emb|CAM02854.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 385

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 128/396 (32%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +  R A     +     P     D+ E +P     L   +  G         +       
Sbjct: 15  DALREAVRALAE-KEIAPFAAEVDEQERYP--REALDALVKSGFAAVHVPEEYGGQGADS 71

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                           +  + + +      + L  +  +       + S E         
Sbjct: 72  VATCIVIEEVARVCASSSLIPAVNKLGTMPIILSGSEELKHKVLSSVASGE--------- 122

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                     L+E+  G+D  A+ ++ +   D         W  +  +S  + ++A  E 
Sbjct: 123 ----TTASYALSEREAGSDAGAMKTRARLDGDHWVLNGTKCWITNGGVSKWYTVMAVTEP 178

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +          G      + K+G + + TVEL F +          +   P   
Sbjct: 179 DKGANGISAFAVHADDPGFTVGPKEKKLGIKGSPTVELYFEDCTIPAD---RIIGEPGTG 235

Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            K  +  LD    ++    + +A+     A+ Y + R   G  + D   ++  +AD+A+ 
Sbjct: 236 FKTALRTLDHTRPTIGAQALGIAQGALDAALDYVKERKQFGKAISDFQGVQFMLADMAMK 295

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  + +  A   +  +           ++   K +   +A  V  +A++  GG+GY 
Sbjct: 296 IEAARHMVYVSAARAERGEGN------LGFISAAAKCFASDVAMEVTTDAVQLFGGAGYT 349

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +  + R  R++    I  G+     + +   L KG
Sbjct: 350 RDFPVERMMRDAKITQIYEGTNQIQRMVMSRALLKG 385


>gi|262201025|ref|YP_003272233.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084372|gb|ACY20340.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 387

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +  G +       ++                      +
Sbjct: 34  PHAADVDENSRFP--QEALDALVASGFNAIHVPEEYDGQGADSVAACIVIEEVARVCASS 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P I S E                   L+E+  G
Sbjct: 92  SLIPAVNKLGTMGLILNGSDELKQQVLPSIASGE-------------AMASYALSEREAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++ ++  D         W  +   S  + ++A  +       +   +      
Sbjct: 139 SDAAGMKTRARRDGDNWVLNGTKCWITNGGKSSWYTVMAVTDPEKKANGISAFMVHKDDP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     L+ K+G + + T EL F +       ++GD                      +V
Sbjct: 199 GFTVGPLEKKLGIKGSPTAELYFEDCTIPADRIIGDEGTGFKTALQTLDHTRPTIGAQAV 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L +AI Y + R   G  +     ++  IAD+A+ + AA  + +  A   +  + 
Sbjct: 259 GIAQGALDKAIEYVKDRKQFGQSISKFQGVEFMIADMAMKVEAARLMVYTSAARAERGEK 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     ++  +K +   +A  V  +A++  GG+GY  +  + R  R++    I  G
Sbjct: 319 N------LGFISSASKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMRDAKITQIYEG 372

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L +
Sbjct: 373 TNQIQRVVMSRALLR 387


>gi|163795653|ref|ZP_02189619.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium
           BAL199]
 gi|159179252|gb|EDP63785.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium
           BAL199]
          Length = 380

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 152/400 (38%), Gaps = 28/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q +  MA           P    WD  E  P    +L+ +   GL       
Sbjct: 2   DFALTEEQQAIRDMARAFA--QEKLAPNAAAWDAEEVFPV--DVLKEAAALGLAGIYVRD 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +              +     +S     + MV    +  V + + P + S E
Sbjct: 58  DVGGSGLGRLDAALIFEELSAGCVSTAAFLSIHNMVSWMVDRFGSEDVRQRFLPSLTSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA+ ++ +K+ +  Y L+G K F+S    SD
Sbjct: 118 -------------TVASYCLTEPGSGSDAAALKTKAEKVGNSHYMLNGGKAFISGAGTSD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            + ++ +  G  G   V  +L +    GL + + + K+G  S  T  + F +       L
Sbjct: 165 VYAVMCRT-GGDGPKGVSCILVEKDTPGLSFGKKERKLGWNSQPTAMVTFEDCKVPAENL 223

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G                 ++ A  S+ G R +L +A+ Y + R   G  + D    +  
Sbjct: 224 VGTEGEGFRIAMQGLDGGRINIAACSLGGARAALEQALSYVKERKQFGKSIADFQATQFR 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  L+ R A S D           A + A + K +   +   ++ EA++ 
Sbjct: 284 LADMATELDAARLLTHRAAASLDAKSPD------ATLHAAMAKRFATDIGFKIVDEALQL 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+++  + R  R+   + IL G+   M + +   L
Sbjct: 338 HGGYGYLKDFPVERLLRDLRVHRILEGTNEIMRVIIGRKL 377


>gi|326436776|gb|EGD82346.1| short-chain acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 401

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 141/379 (37%), Gaps = 32/379 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK    PA    ++     GL        +            A          AG +M
Sbjct: 48  EWDKNHTFPA--DAVQEMASLGLMSIEVPTEYGGSGLDALAYAVALEEISRGCASAGVIM 105

Query: 153 SPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S + +  S   L   +   ++ W     + E                   L+E   G+D 
Sbjct: 106 SVNNSLYSSPVLKYGSEEQYETWLKPFTAGE-------------KLGCFALSEPGNGSDA 152

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            A ++  +   D         W  +   +DA ++ A  +  +    +   L      GL 
Sbjct: 153 GAASTTARDEGDHWVLNGTKSWITNGYEADAAVVFATTDKSLKHKGISAFLVPKPTEGLT 212

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             + ++K+G R+++T  L F       +   N+     +  KI +  LD   + ++   +
Sbjct: 213 LGKKEDKLGIRASSTCNLIFEECR---IPKENLLGSSGQGFKIAMATLDGGRIGIAAQAL 269

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            + +     AI YA++R   G  L    ++   +AD+   + +A  L+ + A   DE + 
Sbjct: 270 GIGQAAFECAIEYAQQRKSMGRPLSSHQMIAEKLADMGTRLESARLLTHKAAVYKDEGRD 329

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++EAA A++ A        + A  +  +A++ +GG G++ +    RHYR++    I  G
Sbjct: 330 FTKEAAMAKLAA-------SEAATFIAHQAIQILGGMGFVTDMPAERHYRDARITEIYEG 382

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +     L +   L K   L
Sbjct: 383 TSEIQRLVIAGKLLKEYAL 401


>gi|239941763|ref|ZP_04693700.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239988223|ref|ZP_04708887.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291445208|ref|ZP_06584598.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291348155|gb|EFE75059.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 385

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 127/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   L        +          +            +
Sbjct: 33  PFAAAVDEESRFP--QEALDALVSSDLAAVHVPEEYGGAGADALATVIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + + +               P+ +        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSEELKRKYL-------------GPLAQGDAMFSYALSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPTKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ I AA  L++  A   +    
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLADMAMKIEAARQLTYAAAAKSERGD- 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 317 -----ADLTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|17538396|ref|NP_500720.1| IsoValeryl-CoA Dehydrogenase family member (ivd-1) [Caenorhabditis
           elegans]
 gi|2702376|gb|AAB92016.1| Hypothetical protein C02B10.1 [Caenorhabditis elegans]
 gi|4455127|gb|AAD21088.1| isovaleryl-CoA dehydrogenase precursor [Caenorhabditis elegans]
          Length = 419

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 27/373 (7%)

Query: 95  DKVEFHPAWHAL---LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           DK++    W  L    ++    GL        +        +H I    L   A   A  
Sbjct: 63  DKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALS 122

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S    + +    +    K + PK+ S E+                L ++E + G+D
Sbjct: 123 YGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMG-------------ALAMSEAQAGSD 169

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + ++  + +K  D         W  + P +D  ++ A+ +       +   L + +  G 
Sbjct: 170 VVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGF 229

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R + T EL F N        +G        +        L  +   +  
Sbjct: 230 SQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGKGKGVYVLMTGLDYERLVLSGGPLGL 289

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M+ +   A  YA +R   G  +    +++  +AD+   + A+ +  + +A + D+    +
Sbjct: 290 MQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSN 349

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++             +  +    V  +A++ +GG+GYI +    R  R++    I  G+ 
Sbjct: 350 KD-------CAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTS 402

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 403 EVRRLIIGRALNK 415


>gi|189485601|ref|YP_001956542.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287560|dbj|BAG14081.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 389

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 75/413 (18%), Positives = 150/413 (36%), Gaps = 41/413 (9%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           +Y+LS   + +   A         P    Y       +K EF      +++      L  
Sbjct: 4   DYMLSEEERLMIETARAIAVEKMKPIREHYD------EKEEFP---WEIVKEFAQSDLCG 54

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
           +     +    +     +                ++ +      + +  +    K + P 
Sbjct: 55  AYIPEEYGGFGKGIMGLVLVVEELCKVDGAIALSLAATALGTLPILISGSEEQKKKYLPD 114

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           I S                    GLTE   G+D   + +   K  D  Y L+G K F+++
Sbjct: 115 IASG-------------KKLAAFGLTEAGAGSDATGMATVAVKDGD-YYVLNGTKCFITN 160

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              ++ + + A+     G   +   + +    G  + + + K+G R+++T EL F +   
Sbjct: 161 GGDAEIYTIFAKTNPDRGARGISCFIVEKGTPGFEFGKKEKKMGIRASSTRELIFDDCRV 220

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G         +          A  ++     +L EA+ YAR+R   G  +    
Sbjct: 221 HKDQLIGKEGHGLLTAQATLDNSRPGVAAQALGIAEGALDEAVEYARKRVQFGQPIASFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            ++  +A++A ++ AA AL +  A   D    K  S+E+A A       K +C ++A  V
Sbjct: 281 AIQHLLAEMATEVEAARALLYASARMIDSGTGKRTSKESAMA-------KLFCSEVAMRV 333

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
              A++  GG GY  E  + +  R++   ++  G+      ++   L K +  
Sbjct: 334 TTNAVQIFGGYGYTREYPVEKMMRDAKITTLYEGTSQIQKNEIALNLIKESAA 386


>gi|170058853|ref|XP_001865105.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167877781|gb|EDS41164.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 423

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 131/375 (34%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK           ++    GL        +  +      H I    L   +   
Sbjct: 64  PFAQEIDKQNEFKDLRNFWKKMGDLGLLGPTVKPEYGGLGGSYLDHCIINEELSRASGSI 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 124 ALSYGAHSNLCVNQIHRNGTEEQKTTYLPKLISGEH-------------IGALAMSEPGS 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D+ ++ ++  K  D         W  + P +D +I+ A+ +        +   + +  
Sbjct: 171 GSDVVSMKTRADKKGDYYVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHGITAFIVERD 230

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G       +K+G R + T EL F +       +LG LN     +        L  A  
Sbjct: 231 TPGFSQGPKLDKLGIRGSGTCELIFEDAKVPAKNILGQLNKGVYVLMSGLDYERLVLAAG 290

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+ +   A  YA  R      + +  +++  +AD+   + A  A  + +A S D  
Sbjct: 291 PVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARSCDLG 350

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+  ++             +C + A  V  EA++ +GG+GYI +    R  R++    I 
Sbjct: 351 KANPKD-------CAGVILYCAEKATQVALEAIQILGGNGYINDYPTGRIMRDAKLYEIG 403

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 404 AGTSEIRRMIIGRAL 418


>gi|148652112|ref|YP_001279205.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571196|gb|ABQ93255.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 388

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 142/380 (37%), Gaps = 25/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +++++   G      +  ++ +   +                 
Sbjct: 26  PNAAEWDRNSHFPV--DVIKKTGELGFLGLYTNPDYDGLGLPRLDSAIVFEELAWGDTAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       M+       V  D  P++ S E             +     LTE   G
Sbjct: 84  AAYISIHNMVTWMIGEYAKDDVRADIVPRLVSGE-------------LLSSYCLTEPNAG 130

Query: 209 TDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  ++T++  K   +  Y LSG K F+S   S   +++    G  G   V   + D   
Sbjct: 131 SDAGSLTTKAVKQDGEDYYLLSGEKTFISGAGSTDILVVMARTGDAGPKGVSAFVVDAHS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y + ++K+G ++  T  + F +        L     G    MK L    ++  I +
Sbjct: 191 EGISYGKNEHKMGWKAQPTRTIHFKDVKVPAKNLLGSEGEGFKFAMKGLDGGRINIGICA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A++Y + R   G  + +   ++  +AD+     AA  + +  AN  D+  
Sbjct: 251 VGTAQAALETALNYVQERKQFGSAIAELQSVQFKLADMLTQTIAARQMLYLAANKVDKKH 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S       A     + K     ++ AV  EA++  GG GY+ E  + RH R+   + IL 
Sbjct: 311 SD------ATTYCAMAKRLATDLSFAVANEALQLHGGYGYLNEYPLERHVRDLRVHQILE 364

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+   M + V   +     L
Sbjct: 365 GTNEIMRVIVSRKMLSDGAL 384


>gi|77461388|ref|YP_350895.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385391|gb|ABA76904.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 598

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/517 (19%), Positives = 183/517 (35%), Gaps = 75/517 (14%)

Query: 55  HKELELLGEYVLS-----CTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHAL 106
           H +   LG +  S         E A+        L+      G  +D  V   P  +   
Sbjct: 22  HTQYAALGAHDASPDMINAILDEGAKFCENVLAPLNRSGDEEGCHFDNGVVTTPTGFKQA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             + +  G H    D ++       +  +  + +   +    G     +  + S +    
Sbjct: 82  FAQYVEGGWHGLAADPAYGGQGLPSSLGLVISEMVASSNTSWGMYPGLTHGAMSAIHAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      +  K+ + ++  T             + LTE   GTD+  I ++    +DG Y
Sbjct: 142 TDEQKNTYLRKLTAGQWTGT-------------MCLTEAHCGTDLGIIKTRAVPQADGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            ++G K F+S+   D       ++LA++         +  F+VP+ L D     G  NG+
Sbjct: 189 AVTGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGTKGISLFIVPKFLPDASGEAGERNGV 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  L F +  GFL+G+ N     +  M     L + +  +     
Sbjct: 249 SCGSIEHKMGIKASATCVLNFDDAKGFLIGEPNKGLNCMFTMMNHARLGTGMQGLCLGEA 308

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   AI YA  R                  +I  P ++R +  +        AL++  A 
Sbjct: 309 SFQGAIKYANDRLQMRALTGAKSPDKPADPIIVHPDVRRMLLTMKAFNEGNRALTYFTAQ 368

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +A++R E       + PI K +       V    M+  GG G+I E  + +
Sbjct: 369 MLDVAHLSPDAEARQEAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHGFIREWGMEQ 428

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+     I  G+     LD+L                  + LGS GK +    +    
Sbjct: 429 LVRDCRIAPIYEGTNGIQALDLLG----------------RKVLGSQGKLLRNFTKIVHK 472

Query: 493 LCKEDKGLAR---FLTEKIALASS-AAALYRAGMNDI 525
            C  + G A+   F+ +   L         + GM  +
Sbjct: 473 FCAANAGNAQLGGFVAQLDGLNQQWGELTMKVGMAAM 509


>gi|77460917|ref|YP_350424.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77384920|gb|ABA76433.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 378

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 133/375 (35%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W         L  ++   G+ CS     +  +     +            L 
Sbjct: 25  EAVPFHGQWEKQGYIDRKLWNKAGEAGMLCSNLPEEYGGLGADFLYSAVVIEEVGRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +  + + + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSEALKQKYLPKLVSGEM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G       L + +
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGTSLFLVEAN 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +  +K+G ++  T EL F +       LLG        +        L  AI 
Sbjct: 191 TPGFDKGKRLDKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQELPQERLTVAIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            ++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 GLASAEAALQWTLDYTRERKAFGKSIADFQNTRFKLAEMATEIQIGRVFVDRCLELHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 311 K-------LDVPTAAMAKYWGTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARSL 378


>gi|120598792|ref|YP_963366.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120558885|gb|ABM24812.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
          Length = 585

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/534 (19%), Positives = 198/534 (37%), Gaps = 62/534 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + QL H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSQLIHPLN 59

Query: 89  PGGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G+        ++V     +  +  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQGNQVITPDGYKTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGC 255
           TE + G+D+  I ++   + DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +     GS NG+    +++K+G + +AT  + + N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLGSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ RH     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERHQGIAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVA 464

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           DL +  +         +   K     AR   + +A+ +      +     + + 
Sbjct: 465 DLKAQMRAF-----SHVDAVKVAAVCARL--DALAIVAETINGQKVAQPALINA 511


>gi|117620593|ref|YP_856610.1| acyl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562000|gb|ABK38948.1| acyl-CoA dehydrogenase family member 8 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 407

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 27/383 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWDK    P     ++++   G         +  +   +           M     
Sbjct: 48  PHAARWDKEHEFPI--PTIKQAAALGFCGLYTPEQYGGLGLPRLDASLIFERLAMGCTST 105

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     + M+     P+V ++W P++ S E             +     LTE   G
Sbjct: 106 TAYLTIHNMVSWMLGSWLPPKVAEEWVPRLASGE-------------LLGSYCLTEPGAG 152

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  +  Y + G K F+S   S D  +++A+  G  G   +   +     
Sbjct: 153 SDAAALKTRAVRDGED-YVIDGSKVFISGAGSTDVLVVMARTGGE-GAKGISAFMVPAQT 210

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y + + K+G  S  T E+ FS         L     G    M+ L    ++ A  S
Sbjct: 211 PGVSYGKAEEKMGWNSQPTREVNFSAVRIPARYRLGQEGEGFKFAMQALDGGRINIATCS 270

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L +A+ + ++R   G  + +   ++  +AD+A ++AAA  L  + A   D   
Sbjct: 271 VGTAQQALDDALAHVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAAARLDAGA 330

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                         + K +   +   +  +A++  GG GYI E  + R+ R++  + IL 
Sbjct: 331 PDKSA------WCAMAKRFATDVGHRICDDALQLFGGYGYIREYPLERYLRDTRVHRILE 384

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQ 467
           G+   M L +   L     L  +
Sbjct: 385 GTNEVMRLIIARRLLAEPGLALE 407


>gi|332975850|gb|EGK12728.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 380

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 136/378 (35%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG +  D+ +  P    + R+     L    +   +            A           
Sbjct: 26  PGADERDRTKTFPV--EIFRKMADLNLMGLPFPEEYGGGGADSISFAIAVEELSRVCAST 83

Query: 149 GHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  ++       L       + +               P+ K       GLTE   
Sbjct: 84  GITYSAHISLGCAPLYLFGNEEQKQRYL-------------VPLCKGESLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDG 265
           G+D     +   +  D  + ++G K F+++      + L  V GR   G   +  ++   
Sbjct: 131 GSDAGGTRTTAIREGDD-WVINGSKCFITNASFAKHLALTAVTGRKEDGSPEISAVIVPT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              G        K+G  S+ T EL   N        L       +    LI LD   + +
Sbjct: 190 DAKGFRVIDNYVKMGLHSSNTTELVMENVRVPHENILGRIGEGFKQF--LITLDGGRIGI 247

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M V +A+     A+ YA+ R   G  +    V++  +AD+A++I  A  + ++ A   
Sbjct: 248 GAMAVGIAQGAYEAALQYAKERQQFGRPISKFQVIQHKLADMAMNIELARNMVYKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +  S+EAA A       K +  ++A  V  +A++  GG GY+ E  + R +R++   
Sbjct: 308 DQGRKFSKEAAMA-------KLFASEVAMGVCDQAVQIHGGYGYMHEYRVERFFRDAKLT 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   +
Sbjct: 361 EIGEGTSEIQRMVIAREI 378


>gi|229542455|ref|ZP_04431515.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326875|gb|EEN92550.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 378

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 133/368 (36%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +L +    GL       ++        A+ +    L   +      L   S    + +
Sbjct: 38  REILGKMATLGLMGITIPETYGGAGLDFTAYVLAVHELSKASATIGVILSVHSSVGTAPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + + PK+ S EY                  LTE   G+D   + ++  K  
Sbjct: 98  LYFGSEAQKQKYLPKLASGEY-------------LGAFCLTEAEAGSDAKNLKTRAVKQG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     +  +   +D +I+ A+ E       +   + + +  G    + + K+G  
Sbjct: 145 RHYVLNGSKMFITNGGEADTYIVFARTEDG----NITAFIVEKTMPGFRVGKDEKKMGLH 200

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AI 336
            + TV+L F N         N      E  KI +  LD+  + ++   + +AE     A+
Sbjct: 201 GSKTVQLHFENLQVPA---ENRLGEEGEGFKIAMAVLDAGRIGIAAQALGIAEGAYERAL 257

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +         +AD+A +I A+  L +R A          +EAA A+++
Sbjct: 258 QYAKNRRQFGKPIHAFEGTGFKLADMATNIEASKLLLYRAAFLRSNGLDCKKEAAMAKLL 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A  T       A     EA++  GG GY E+  + R  R++    I  G+     + + N
Sbjct: 318 ASQT-------AVDTAIEAVQIFGGYGYTEDYPVERFMRDAKITQIYEGTSEIQRIVISN 370

Query: 457 LLEKGTNL 464
            L +   L
Sbjct: 371 QLLREKRL 378


>gi|28212011|ref|NP_782955.1| butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28204454|gb|AAO36892.1| butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+      + +        ++ I    L  +    
Sbjct: 26  PIAAEIDETERFPM--ENVEKMAKLGMMGIPIPKEYGGAGGDVLSYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS++    T    + +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCASLIYEHGTEEQKQKYL-------------VPLAKGEKIGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   S    + D  Y L+G K F+++  ++D  ++ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQSIAIDMGDH-YLLNGSKIFITNGGVADVAVVFAMTDRSKGTRGISAFILEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    ++++K+G R+++T EL F +        +     G    MK L    +  A  
Sbjct: 190 MPGFSVGKVEDKMGIRASSTTELIFEDVKVPKENLIGKEGRGFGIAMKTLDGGRIGIASQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +L EAI Y + R   G  L     +   +AD+ + I +A  L ++ A      
Sbjct: 250 ALGIAEGALEEAITYMKERKQFGRELYKFQGLSWMMADMKVAIESARLLVYQAAWKKQNK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              SEEAA A++ A         +A  V  + ++  GG GY ++  + R  R++    I 
Sbjct: 310 LPYSEEAAMAKLHAA-------NVAMDVTTKVVQLFGGYGYTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L +
Sbjct: 363 EGTSQVQQMVISGSLFR 379


>gi|319651583|ref|ZP_08005710.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317396650|gb|EFV77361.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 379

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 135/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  P    + ++    GL    +   +                   A    
Sbjct: 26  PGALERDRTKEFPI--EVFKKMADLGLMGLPFPEEYGGAGADTVSFAIVTEELSRACAST 83

Query: 149 GHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  ++       L  T    + +   I + E                  GLTE   
Sbjct: 84  GITYSAHISLGGAPLYLFGTEEQKQKYLVPICTGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     +      DG Y ++G+K F+++      + L  V G   G   +  ++    
Sbjct: 131 GSDAGGTRTTAV-EKDGEYIINGNKCFITNASYAKHLALTAVTGEKDGKKEISAIIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G        K+G  ++ T EL   +        L       +    LI LD   + + 
Sbjct: 190 AEGFTVIDNYEKMGLNASNTTELVLEDVRVPTEHLLGKKGEGFKQF--LITLDGGRIGIG 247

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + +A+A +     YA+ R   G  L D   ++  +AD+A+ I  A  + ++ A   D
Sbjct: 248 AMALGIAQAAYDKALQYAKERKQFGRSLSDFQAIQFKLADMAMKIELARNMVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  ++EA+         K +  ++   +  +A++  GG GY+++  + R+ R+     
Sbjct: 308 QGRPFAKEASM-------CKLYASEICMEIADQAVQIHGGYGYMKDYHVERYMRDGKLTE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +  L+
Sbjct: 361 IGEGTSEVQRMVIARLI 377


>gi|124009561|ref|ZP_01694235.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123984800|gb|EAY24775.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 389

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 126/365 (34%), Gaps = 25/365 (6%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTS 158
            PA   L       G    + + ++          + A          A   MS  +   
Sbjct: 46  TPALAELKEMG-ELGFMGMMVNETYGGAGMDTVSYVLAIEEISKIDASASVAMSVNNSLV 104

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    T    + +               P+          L+E   G+D  +  +  
Sbjct: 105 CWGLEAYGTEEQKEKYLK-------------PLAAGEKIGAFCLSEPEAGSDATSQRTTA 151

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   D         W  +  ++D ++++AQ     G   +  L+ +    G    + ++K
Sbjct: 152 EDKGDYYLLNGTKNWITNGSIADTYLVIAQTYPEKGQKGINVLIVEKGMEGFVVGKKEDK 211

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEA 335
           +G R + T  L F++        +     G    MK      +  A  ++     +   +
Sbjct: 212 LGIRGSDTHSLMFTDVKVPKENRIGDDGFGFRFAMKTLNGGRIGIAAQALGIASGAYELS 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +     +   +AD+A +I AA  L  + A + D  +  ++ +A A  
Sbjct: 272 LKYAQERKAFGKPIHQHQAIAFKLADMATNIEAARLLVLKAARAKDMGQDYAQLSAMA-- 329

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  K+A     EA++  GG GY++E  + R  R++    I  G+     + + 
Sbjct: 330 -----KLFASKVAMETTVEAVQVHGGYGYVKEYHVERLMRDAKITQIYEGTSEVQKIVIS 384

Query: 456 NLLEK 460
             + K
Sbjct: 385 RGILK 389


>gi|260428167|ref|ZP_05782146.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45]
 gi|260422659|gb|EEX15910.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45]
          Length = 592

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/537 (17%), Positives = 186/537 (34%), Gaps = 73/537 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           E L         +E A++A      L+      G   +   V     +     +    G 
Sbjct: 30  EELDRDTTGAILEEAAKLAENVLAPLNRVGDEQGCVLENGVVRTPEGFKDAFDQMRDGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +               ++  A +        +  + + +    +      + 
Sbjct: 90  TALDCDPEYGGQGLPYLMSTAVGEMFSSANMAFNMYQGLTHGAYNAIHAHGSEEQKATYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K ++
Sbjct: 150 PKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTRAEPQEDGSYRITGSKIWI 196

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       +  F+VP+ L +     G+ N L    L+ K+
Sbjct: 197 SAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFLVNEDGSPGARNSLSCGGLEKKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    GFL+G+ +     +  M     L   +   +   V+   A+ +A
Sbjct: 257 GIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGFAQGAVAYENALGFA 316

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-- 385
           R R                  ++  P ++R + D       A A  +  A   D A    
Sbjct: 317 RERQQGRAVTGTQMPEAPADTIMVHPDVRRNLMDQKSITEGARAFVYWGAMLIDMAHRAE 376

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +      ++ P+ K +           A + +GGSG+  E  + +  R++    I  G
Sbjct: 377 DPDAEGLISLLTPVIKGFLTDKGFETCVLAQQTLGGSGFTREWGLEQFVRDARITMIYEG 436

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           +     LD++   L   G       F  +++ +  +               +++   A+F
Sbjct: 437 TNGIQSLDLVGRKLATDGGKHVMAFFDMVKRFIAEN-------------KGQDEAFDAQF 483

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           L     L +++  L  AGM      F++        + +  L G ++  H+   + L
Sbjct: 484 LE---PLKAASKDLQAAGM-----FFMQK----GMKNPNDALSGSYDFMHLFGHVCL 528


>gi|239981829|ref|ZP_04704353.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 368

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 128/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L       LH      S+          +            +
Sbjct: 16  PHAAAVDEEARFP--QEALDALTAADLHAVHVPESYGGAGADALATVLVIEEVARVCASS 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 74  SLIPAVNKLGSLPVVLSGSEELKKKYL-------------GPLAKGDGMFSYCLSEPDAG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +    
Sbjct: 121 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKGDE 180

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  ++
Sbjct: 181 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 240

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A   +  ++
Sbjct: 241 GIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKLEAARQLTYAAAAKSERVEN 300

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 301 D------LTFFGAAAKCYASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 354

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 355 TNQVQRIVMARNL 367


>gi|238505142|ref|XP_002383800.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus
           NRRL3357]
 gi|220689914|gb|EED46264.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus
           NRRL3357]
          Length = 430

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 142/374 (37%), Gaps = 20/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             + D     PA   + ++    G      +  +  +    QAH I    L   +   A 
Sbjct: 70  AAKTDAQNEFPA--EMWKKLGDAGFLGITANEDYGGLGMGYQAHCIVMEELSRASGSIAL 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  +P   + + P + S                   L ++E   G+
Sbjct: 128 SYAAHSQLCVNQLSLNGSPEQKERFLPGLLSG-------------DKIGALAMSEHSAGS 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  +++  G        W  + P +D  ++ A+ E + G   +   + + +  G
Sbjct: 175 DVVSMKTTAKEVDGGYVLNGTKMWITNGPDADFIVVYAKTEPQKGSKGITAFVVEKTFAG 234

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     +LG++N     + +   L  L  +   + 
Sbjct: 235 FSCARKLDKLGMRGSNTGELIFEDVFVPKENVLGEVNRGVKVLMEGLDLERLVLSAGPLG 294

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   + A+ A ++  A   D + S 
Sbjct: 295 IMQAALDLVLPYTHVRKQFGTPIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASL 354

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S E +           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 355 S-EVSIRTQDCAGAILYAAERATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 414 SEIRRMVIGRAFNK 427


>gi|146308122|ref|YP_001188587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576323|gb|ABP85855.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 592

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 100/514 (19%), Positives = 198/514 (38%), Gaps = 57/514 (11%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLH-AYGPGGERWDK----VEFHPAWHALLRRSIHDG 114
                +     +E A++A      L+      G ++D     V     + A  R+    G
Sbjct: 33  EFSADLGGAILEEAAKLAENVLAPLNGPGDKQGCQYDPNTYAVRTPDGFKAAYRQFAEGG 92

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
                    F        H +      +         M P +T  ++ AL    TP    
Sbjct: 93  WTALACTPEFGGQGLP--HVLNMLVEEMTCSANLSLGMYPGLTHGAINALTSHGTPEQQA 150

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P++ S E+  T             + LTE + GTD+  I ++    +DG + L+G K
Sbjct: 151 QYLPQLISGEWTGT-------------MCLTEPQCGTDLGLIRTRAVPQADGSFALTGTK 197

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +++    D       ++LA++         +  FLVP+ L DG+ N      L++K+G 
Sbjct: 198 IWITGGEHDLVDNIIHLVLAKLPDAPDSVKGISLFLVPKFLADGTRNSAFCGGLEHKMGI 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +AT  + F    G+L+G+ N     +  M     L   +  +     +   A+ +AR 
Sbjct: 258 KGSATCVMNFEGAKGWLIGEPNKGLSCMFTMMNSARLMVGMQGLGVAESAYQIALGFARE 317

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEA 383
           R  S               ++  P ++R +    + I    AL++       +A+  ++A
Sbjct: 318 RLQSRSIAGPKAADKPADPILVHPDVRRMLLRQKVMIEGCRALAYFAGLQQDIAHGAEDA 377

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++R+      +++ P+ K +          E ++ +GGSG+ E+  I +  R+S    I 
Sbjct: 378 EARTRADDLVQLLTPVVKAFLTDEGFTCANEGLQVLGGSGFTEDWGIEQLVRDSRITRIY 437

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK--VITILRDSISLCKEDKG 499
            G+     LD++   L   G       F+ ++  L S+ +      + +    L +    
Sbjct: 438 EGTNGIQALDLVGRKLALGGGRAVRAFFALIDSWLKSNAEAPHAAAVTQTLRQLQQASLW 497

Query: 500 LARFLTEKIALASSAA--ALYRAGMNDIADVFLE 531
           LA   ++    A++AA   L   G+  +A ++ +
Sbjct: 498 LASEGSKDPEQAAAAATPYLRLFGLTSLAWLWAQ 531


>gi|196043351|ref|ZP_03110589.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|196025660|gb|EDX64329.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
          Length = 381

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    K +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKKKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEDNGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|71905738|ref|YP_283325.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71845359|gb|AAZ44855.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 378

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 74/392 (18%), Positives = 139/392 (35%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R +     Q     P    WDK    PA    L+     G    +    +      
Sbjct: 7   QEMIRDSMRAFAQ-ERLAPFAAEWDKNHTFPA--EALKELGELGAMGMVVPEEWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKA 189
               +               ++S   + A  + A   T    ++W               
Sbjct: 64  YMSLVLTLEEIAAGDGATSTIVSVQNSLACGITAKYGTDAQKEEWLK------------- 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +        LTE   G+D AAIT++  +  D        ++  +   +   I+ A  
Sbjct: 111 PLARGEKLGCFCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKYAHMAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGP 308
           +   G   +   L      G    R ++K+G  ++ TV++ F +        L     G 
Sbjct: 171 DKAAGKKGISCFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGY 230

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L    +  A  S+   R +   A+ YA+ R   G  +I+   +   +AD+   +
Sbjct: 231 KIALSNLEAGRIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + +R A   D  K   +EA+ A++       +  + A  + ++A++  GG GY  
Sbjct: 291 DAARLMVWRAAMLKDAGKPCLKEASMAKM-------FASEAAEKIASDAIQIHGGVGYTS 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   +
Sbjct: 344 DFPVERIYRDVRICQIYEGANDIQRLVIGRSI 375


>gi|297200146|ref|ZP_06917543.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197713403|gb|EDY57437.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 385

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 132/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + + LH       +          +          + +
Sbjct: 33  PYAAAVDEEARFP--REALDALVANDLHAVHVPEEYGGAGADALATVIVIEEVARVCVSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVILSGSDELKKKYM-------------TPLAKGDAMFSYALSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++  S+ + ++A  +       +   + + S  
Sbjct: 138 SDAAGMKTKAVRDGDHWILNGVKRWITNAGESEYYTVMAVTDPSKRSKGISAFVVEKSDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +   A  Y + R   G  + D   ++  +AD+A+ I+AA AL+++ A + +    
Sbjct: 258 GVAQGAFDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKISAARALTYQAAAASERLDK 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|156976709|ref|YP_001447615.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116]
 gi|156528303|gb|ABU73388.1| hypothetical protein VIBHAR_05484 [Vibrio harveyi ATCC BAA-1116]
          Length = 384

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 146/406 (35%), Gaps = 27/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A  A     +     P    WD+ +  P    +LR +   G        
Sbjct: 2   DFELNEDQRMFADTAQQFAAE--RLAPMAAGWDEKQIFP--KDILREAGELGFLSLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+       MVA   +  V   + PK+ + +
Sbjct: 58  EQGGLGLSRLDASIIFEQLSMGCTSTTAFMTIHNMVTWMVASFASEEVKDAFCPKLITGD 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                  LTE   G+D A++T+   K  D      G  +   +  +D 
Sbjct: 118 F-------------LGSYCLTEPNAGSDAASLTTSATKQGDNYILNGGKTFISGAGDTDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   V   +     +G+ Y R + K+G  S  T  + F N        L
Sbjct: 165 LVVMART-GDAGARGVSAFVVPADADGISYGRKEPKMGWNSQPTRAVTFDNVSIPASHLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    ++ A  SV   + +L +A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFVFAMKGLDGGRINIATCSVGTAQQALNQAAQYMQERKQFGKSLAQFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A+  D           A     + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQLVRYAASKLDRGDPD------ATTYCAMAKRFATDVGFQVCDQALQLY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG GYI+E  + R++R+   + IL G+   M L +   L    +  
Sbjct: 338 GGYGYIKEYPMERYFRDVRVHQILEGTNEIMRLIIARRLLAEESAL 383


>gi|169826548|ref|YP_001696706.1| protein aidB [Lysinibacillus sphaericus C3-41]
 gi|168991036|gb|ACA38576.1| Protein aidB [Lysinibacillus sphaericus C3-41]
          Length = 555

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/533 (21%), Positives = 221/533 (41%), Gaps = 48/533 (9%)

Query: 35  NAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L  ++       F S  H+EL   GE                  P+L  Y  
Sbjct: 13  NFFTGDETLQKVLEMMLDKEFSSYAHRELTDFGELCADAIDVRAKHTDRQGEPRLQRYNA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +  + +A ++       V + + P + +       +             LTE++G
Sbjct: 132 FYCPVTLTMATAYLLDHYAEEEVKQRFLPHVCATGDLELYEGATF---------LTERQG 182

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPR 260
           G+D+ A   + + + +  Y L G K+F  ++ M    ++LA+++G       +  F VP 
Sbjct: 183 GSDVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIDGAQAGSKGLTLFAVPW 241

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
             EDGS N L  +RLK+K+G ++  + E+EF     +++GD N     + +   L  + +
Sbjct: 242 RNEDGSVNHLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDPNKGIYYMLEALNLSRICN 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S+  MR    EA HY   R+  G  L   P+++  +   A  +    A  F L   +
Sbjct: 302 AVASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLY 361

Query: 381 DE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D+    +   ++    R+   I K    + A    +EA+E  GG+GYIE+    R  R++
Sbjct: 362 DKVTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDA 421

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496
              ++  G+ N + L+++ L++K     E     + + L   +   ++ I+++ ++    
Sbjct: 422 QVLTVWEGTANILALELIRLVDK-YRAHELFVQEMSERLEVLTDHSLVKIVQEQLTKLSA 480

Query: 497 --------DKG----LARFLTEKIALASSAAALYRAGM------NDIADVFLE 531
                   D+      A+ + +K+A    +                +ADV+LE
Sbjct: 481 TLQIFSALDEATKTFEAKDVAQKMAHLYESVIAVEWAQKFGGKYEKLADVYLE 533


>gi|108760804|ref|YP_634058.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108464684|gb|ABF89869.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 395

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 148/401 (36%), Gaps = 27/401 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E+ L+   + L   A     ++    P    +D+    P    LL  +   GL       
Sbjct: 19  EFQLTDAQRALQDAARKFAREVVR--PKAAHYDETATFPL--DLLTTAWELGLLNMAIPA 74

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  V      +   A             +  +  +   + L  T    K          
Sbjct: 75  EYGGVGLSHLDQTIVAEELSWGCAGVATSIIANDLANLPIILHATEEQKKRLL------- 127

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P  +        LTE   G+D+A + +  +   D         +  +   +  
Sbjct: 128 ------TPFTEKLKFSSFCLTEPEAGSDVANMQTTARLDGDHYVLNGAKCFITNGGQASQ 181

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           + + A V+       +   + +G P GL   + +NK+G R++ TV L F +    +   +
Sbjct: 182 YTVFATVDKGKKHKGITCFVVEGRPEGLSVSKHENKMGQRASETVSLTFEDVRVPVANRI 241

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L      +A+ SV   R +L  ++ Y+ +R   G  +I+   ++  I
Sbjct: 242 GEEGQGFAIAMATLDNSRPLTAMFSVGIARAALEHSMEYSTQRRTFGKPIIEHQAIQFMI 301

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A++  AA  L++  A   DE K  S +++YA+        +   MA  V  +A++  
Sbjct: 302 ADMAMNTHAARMLTYESAWLLDEGKRNSLQSSYAKC-------FAADMAMKVATDAVQVY 354

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GYI+E  + +  R++    +  G+     L +   L K
Sbjct: 355 GGYGYIKEYPVEKLMRDAKLIQVYEGTSQVQRLVIARELFK 395


>gi|145476811|ref|XP_001424428.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391492|emb|CAK57030.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 150/400 (37%), Gaps = 44/400 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            E+E L  +V    A+E+A +A+                D+    P    L R+    GL
Sbjct: 25  PEVEELRSHVTKFAAEEVAPLADKA--------------DQEGKFP--PHLWRKMGDLGL 68

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHK 172
             +  D ++       ++      L  +++   G  +S S  SA  VA           K
Sbjct: 69  LGATVDPAYGGSGL--SYSAHCMILEEISRASGGIGLSYSAHSALNVAQLQRHGNEAQKK 126

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                L ++E   G+D+ ++ +  +K+ D         
Sbjct: 127 KYLPKLCSGEW-------------VGALAMSEPNAGSDVVSMKTTAKKVGDKYILNGSKM 173

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  + P++D  ++ A+ E       +   + +    G    +  +KIG + + T  + F 
Sbjct: 174 WITNGPVADVIVVYAKTEPEKKQHGITAFIVEAGMKGFSRGKKLDKIGMKCSDTAPIYFD 233

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N       +LG++N     +        L  A   V  M+ +   +  Y   R   G  +
Sbjct: 234 NVEVPAENVLGEVNKGVYVLMSGLDYERLVLAAGPVGLMQAAFDISREYCNTRQQFGKPI 293

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +M+  +A++   + A+ A+ + ++ + D     + +            Y+    A 
Sbjct: 294 GQFQLMQGKLAEMYTTLQASRAMLYSVSRAVDSGNITNTD-------CAALIYYTSVNAT 346

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            V  EA++C+GG+GY +E  + R   ++    I  G+   
Sbjct: 347 QVGLEAIQCLGGNGYTQEYPVGRIMNDAKLYEIGAGTTEI 386


>gi|163815116|ref|ZP_02206497.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759]
 gi|158449525|gb|EDP26520.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759]
          Length = 388

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 140/391 (35%), Gaps = 47/391 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     + +    G       +                  Y M   E 
Sbjct: 26  PLAQEIDEQHRFP--RETVEKMAKYGFLGIPVSKELGGQGCD-------ILTYAMCVEEL 76

Query: 149 GHLM--------SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +         + +      +    TP   + + P + S                    
Sbjct: 77  SKVCGTTGVIVSAHTSLCVDPIVTFGTPAQKEKYVPDLASG-------------RKLGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGC 255
           GLTE   GTD     ++     D  + L+G K F+++   +D +I++A      +     
Sbjct: 124 GLTEPGAGTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKEADVYIVIAVTGIVEKRGRKM 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    G  +   +NK+G   ++T EL F++          +     +   I 
Sbjct: 183 KEISAFIVEKGTPGFTFGTKENKMGICGSSTYELIFTDCRIPKDA---LLGQKGKGFNIA 239

Query: 316 IY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           ++ LD   + ++   + +AE      ++Y + R   G  +      +  +AD+A  I AA
Sbjct: 240 MHTLDGGRIGIAAQALGIAEGALETTVNYVKERKQFGRSIAQFQNTQFVLADLATKIEAA 299

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++ A   DE +S ++ +    + A + K +  ++A  V  + ++  GG GYI+E  
Sbjct: 300 KLLVYKAARKKDEYQSGAKVS--YSVEAAMAKLYAAEVAMEVTTKCVQLHGGYGYIKEYD 357

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R  R++    I  G+     + +   L K
Sbjct: 358 VERMMRDAKITEIYEGTSEVQRMVISANLLK 388


>gi|146293131|ref|YP_001183555.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564821|gb|ABP75756.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 585

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 102/489 (20%), Positives = 186/489 (38%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + QL H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSQLIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     +  +  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGC 255
           TE + G+D+  I ++   + DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +     GS NG+    +++K+G + +AT  + + N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLGSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ RH     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERHQGIAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVG 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|281201441|gb|EFA75651.1| Probable acyl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 617

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 122/538 (22%), Positives = 218/538 (40%), Gaps = 56/538 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANY 79
             Q    +G N Y  DS L+  +       + + +  +L   G+ V+     E  R    
Sbjct: 21  FQQEAPRLG-NQYLEDSYLIESLKRVVPSNYLNEIEPDLVRFGDRVMGD-ILEYGRACEN 78

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+  AY   G R DK+     W+ L   S  +GL    ++R  +   R      +  +
Sbjct: 79  NPPKHVAYDAWGRRIDKIVVDEGWNILKDISAVEGLVSIGYERKQKEFSR----LYQYLK 134

Query: 140 LYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +YL A   A      S+T   A ++ L     +     P   +R+          K    
Sbjct: 135 IYLFACSSAVFDCPLSMTDGGARLLELYGDKELMTTAYPHYVTRD---------PKNFWT 185

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIMLAQ-VEGRVG 254
            G  +TEK GG+D+A   S  +   DG   Y +SG+K+F S+  +   ++LA+  E   G
Sbjct: 186 SGQWMTEKTGGSDVANSESVAEPRKDGSNRYDISGYKYFTSATTAQTAMILARDREPETG 245

Query: 255 CF-----LVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
            F      +               N +   ++KNK G ++  T E+E   T G ++G+  
Sbjct: 246 GFRSGSRGLSAFFIKIRKDNGKDLNNMMIHKMKNKFGTKAVPTTEIELLGTEGVMIGNKG 305

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +  +  +  + + I SV+ MR  +A A  +A RR V G  L +  +    +A++ 
Sbjct: 306 RGVPIIASILNITRIHNVIHSVATMRRGVALARDFAHRRKVFGSSLAENQLYISTLAEME 365

Query: 364 LDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  A       ++    ++   +   +  +  RI+ P++K +  K +  V +E +EC+G
Sbjct: 366 IEYRAGLQFLLNVSLLLGQSECLEKNPKIDSLLRILTPLSKLYTAKQSILVSSETIECMG 425

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GY+E+  I R  R++   +I  G+ N + +DV   + K  N    L   +     ++ 
Sbjct: 426 GTGYMEDSDIPRLLRDTQVTAIWEGTTNVLSMDVWRSI-KSHNSLVVLLDEIRSKTAATT 484

Query: 481 KK------VITILRDSISLCKEDKGLARFLTEKIA-------LASS---AAALYRAGM 522
           K           + +++    E    +  L   IA       L S    AA LY   +
Sbjct: 485 KAGSPLANAKQTIENAVKAILEISNGSDDLDFVIANAKKFSFLLSQTYMAALLYEHAL 542


>gi|302521377|ref|ZP_07273719.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302430272|gb|EFL02088.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 382

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 132/375 (35%), Gaps = 24/375 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
            GP     D+    P             LH      ++          +           
Sbjct: 28  IGPHAAEVDEQGRFP--QEARDALTAADLHAVHVPENYGGAGADALATVIVIEEVARVCA 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  + + +   +  V +  +  + K +               P+ K        L+E  
Sbjct: 86  SSSLIPAVNKLGSLPVIISGSEELKKKYL-------------GPLAKGDAMFSYALSEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +  
Sbjct: 133 AGSDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPGKRSKGISAFVVEKG 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  
Sbjct: 193 DEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQ 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A  Y + R   G  + D   ++  +AD+A+ I+AA AL+++ A + +  
Sbjct: 253 ALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLADMAMKISAARALTYQAAAASERG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A         K +   +A  V  +A++ +GG GY  +  + R  R++    I 
Sbjct: 313 D------ADLTYQGAAAKCFASDVAMEVTTDAVQLLGGYGYTRDYPVERMMRDAKITQIY 366

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 367 EGTNQVQRIVMARNL 381


>gi|34762277|ref|ZP_00143282.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742636|ref|ZP_04573117.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|256846030|ref|ZP_05551488.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|27888063|gb|EAA25125.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430284|gb|EEO40496.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|256719589|gb|EEU33144.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 378

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 139/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +  +    +    
Sbjct: 52  ALEVPEKYGGPGLKRVDIAALIEEMAIADAGFATTISASGLAMKPVFISGSEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +    +                  LTE   G+D +A  +   K  +  Y L+G K F++
Sbjct: 112 LVLGGGF--------------GAFCLTEPGAGSDASAGRTTAVKDGNE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++ +GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 330 SEAIQMLGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|326799657|ref|YP_004317476.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326550421|gb|ADZ78806.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 390

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLE 147
           P    WD+ +  P    L  +    GL   +    +         +      +  +    
Sbjct: 32  PHVMEWDEEQIFP--RELFGQMGALGLMGVLVPEHYGGAGLGYHEYVDVIVEIARVCGGI 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +      +           W PK+ S E+                 GLTE   
Sbjct: 90  GLSLAAHNSLCTGHLLAFGNEEQKARWLPKLASGEW-------------IGAWGLTEANT 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D   + +      D         W       D  +++A+   +     +   + +   
Sbjct: 137 GSDALNMLTTAVLEGDHYVINGTKNWITHGKSGDIAVVMARTGNKGESGGISAFMIEKGT 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G  + + +NK+G R++ T EL   N        L +   G  + MK+L    +  A ++
Sbjct: 197 PGFMHGKKENKLGMRASETTELILDNVRVPKSNLLGLEGEGFKQAMKVLDGGRISIAALA 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  AI Y+++RH  G  + +   +   IAD+A ++ AA  L  R A   ++  
Sbjct: 257 LGIAKGALDAAITYSQQRHQFGQPIANFQAISFKIADMATEVEAAELLIQRAAEWKNKGI 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++ +A A       KY+  ++A  V  EA++  GG GY ++  + + YR++   +I  
Sbjct: 317 PVTKASAMA-------KYYASEVAVKVATEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGE 369

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   + +   
Sbjct: 370 GTSEIQKMVISREVLRAGK 388


>gi|293611087|ref|ZP_06693386.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826739|gb|EFF85105.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 593

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/515 (17%), Positives = 190/515 (36%), Gaps = 58/515 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G R++  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   ++   +    +
Sbjct: 89  GGWIGLGADEEWGGQGMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALSSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L +     G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA  R                  ++    ++R + ++  +   + A +  +    D  K
Sbjct: 316 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEVSRAFAVYVGQQLDITK 375

Query: 385 SRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ AA         ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
           E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 495 EIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|262281091|ref|ZP_06058873.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257322|gb|EEY76058.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 593

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/519 (16%), Positives = 191/519 (36%), Gaps = 58/519 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G R++  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   ++   +    +
Sbjct: 89  GGWIGLGADEEWGGQGMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALSSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+   +     G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYFVNEDGSLGERNLVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA  R                  ++    ++R + ++  +  A+ A +  +    D   
Sbjct: 316 QYATDRLQGRSALGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAVT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           E + + +F+ E+ A      +SAA  Y   +  ++  ++
Sbjct: 495 EIEAITQFIIEQAAENVDFPNSAAVDYLHAVGLLSFAYM 533


>gi|167647017|ref|YP_001684680.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349447|gb|ABZ72182.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 379

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 137/375 (36%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +LR++   G               K+              +  
Sbjct: 26  PHSAEWDEKRHFPV--DVLRQAAELGFAGIYVQEDVGGTGLKRLDASIIFEALSYGDVPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    ++ M+    +  + + + P++ + E             +     LTE   G
Sbjct: 84  AAYLTIHNMASWMIDRFGSDELRRRYLPRLTTME-------------LIASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + +  +   D      G  +     +SD ++++A+  G  G   V   + +    
Sbjct: 131 SDAANMRTTARLDGDHYVLNGGKAFISGGGVSDVYVVMART-GVDGAKGVSAFVVEKGTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           GL +   + K+G  S  T  + F +    +   +     G    M  L    L+ A  S+
Sbjct: 190 GLSFGANERKMGWNSQPTAAVNFDDCRVPVANRIGQEGEGFRFAMMGLDGGRLNIASCSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G   +L  A  Y   R   G  L D   ++  +AD+A ++ AA  +  R A++ D    
Sbjct: 250 GGAAFALDTAKAYLETRKQFGKPLKDFQALQFKLADMATELEAARLMVRRAAHALDNRDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +      A  +  + K +       V  +A++  GG GY+++  + R  R+   + IL G
Sbjct: 310 Q------ATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERIVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   + +
Sbjct: 364 TNEIMRVIIAREMFR 378


>gi|21623534|dbj|BAC00860.1| butyryl-CoA dehydrogenase [Butyrivibrio fibrisolvens]
          Length = 389

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 137/386 (35%), Gaps = 36/386 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       + +         + I    L  +    
Sbjct: 26  PLAQEIDETEQFP--RETVEKMQKFGFMGIPVPKEYGGQGCDVLTYIIAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L + +      +    T    + +               P+ K        LTE   
Sbjct: 84  GVILSAHTSLCCDPILTYGTEEQKQKYL-------------VPLAKGEKLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPR 260
           GTD     ++  +  D  + L+G K F+++   +D +I+ A  +      GR        
Sbjct: 131 GTDAQGAQTKAVEDGD-SWILNGSKCFITNGKEADVYIIFAVTDIVEDAKGRKSKKF-SA 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + +    G  +   + K+G R+++T EL F +     +   N+     +   I ++ LD
Sbjct: 189 FIVEKGTPGFTFGTKEKKMGIRASSTYELIFQDCR---IPKENILGPRGKGFGIAMHTLD 245

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + + E      I + + R   G  +      +  +AD+   + AA  L +
Sbjct: 246 GGRIGIAAQALGIGEGSIDATIDFVKERKQFGRAISAFQNTQFNLADMKTRMDAAKYLVY 305

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A + D+     + +    I A   K +  + A AV  +A++  GG GY  E  + R  
Sbjct: 306 KAACTKDQYMEDHKTS--YSIEAAEAKLFAAEAAMAVTTKAVQLHGGYGYTREYDVERMM 363

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+     + +   + K
Sbjct: 364 RDAKITEIYEGTSEVQRMVISGSMLK 389


>gi|84684409|ref|ZP_01012310.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667388|gb|EAQ13857.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 571

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 91/557 (16%), Positives = 202/557 (36%), Gaps = 55/557 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VE 98
           LL  ++        ++        ++    E  ++A+     L       G   +   V 
Sbjct: 13  LLDHVVGFEAVPATEKFAEATADTVTAILTEAGKLADEVIAPLQRNGDLQGAVLENGVVR 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +          G      D  +  +       + A+   ++A       ++P ++ 
Sbjct: 73  SSPGFKEGYEAMAEGGWIGISGDPEYGGMGLP--FTLTASVNDMIAGACLAIGLNPLLSQ 130

Query: 159 ASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + AL    +  + + + PK+ S E+  T             + LTE + G+D+ A+T+
Sbjct: 131 GQIEALEAHASDELKELYLPKLTSGEWTGT-------------MNLTEPQAGSDVGALTT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED------ 264
           +     DG + ++G K ++S    D       ++LA+  +G  G   +   +        
Sbjct: 178 KAVPNGDGTFAITGQKIYISWGDHDMAENICHLVLARLPDGAPGTKGISLFMVPKYIPDE 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L++K+G   + T  + +    G+++G+ +     +  M     L+ 
Sbjct: 238 NGNPGKANDLRVVSLEHKMGLHGSPTCVMSYEGATGWIVGEEHAGMAAMFTMMNNARLNV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALS 373
            +  V     +   A+ YA  R             + D   ++R +  +  +  AA A+S
Sbjct: 298 GVQGVGVAEGAYQHALAYALERKQGKTPIENGTGTIADFADVRRMLVQMRAETYAARAIS 357

Query: 374 FRLANSFDEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              + + D A +  ++   A A  + PI K +       V    ++  GG GY+EE   A
Sbjct: 358 LACSTAIDMAGATGDKGWKARAAFLTPIAKSYGTDTGIKVAELGVQVHGGMGYVEETGAA 417

Query: 432 RHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           ++YR+    SI  G+     +D V   +  G ++  +L   +E     + + +  + +  
Sbjct: 418 QYYRDVRVTSIYEGTNGIQAMDLVARKMMDGGDMAFRLLDEIEGTAEGARETLGELAKPV 477

Query: 491 ISLCKEDKGLARFLTEK-IALASSAAALYRAGMNDIADVF--LENRFLDNCHSTHCMLHG 547
               +  +    +L E+ +    + A  Y++    +   +  L++   +        L  
Sbjct: 478 WEAAETLREATEWLVEQDLQTRFAGAVPYQSAFARVLGAYYHLKSAIAEEGRGPRTALAA 537

Query: 548 RF------NAAHIIDSL 558
            +      + A  ++  
Sbjct: 538 FYIERLLPDHASSLEQA 554


>gi|319426357|gb|ADV54431.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 585

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 97/488 (19%), Positives = 186/488 (38%), Gaps = 53/488 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVV--HKELELLGE-YVLSCTAQELARMANYNTPQL-H 85
           MN Y +       L+  + + P+      E+  + +    +   +E A++++     L  
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEITEMVDIDTANAILEEAAKISSQLIHPLNR 60

Query: 86  AYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                G   + ++V     +  +  +    G      D  F  +   +   I    +   
Sbjct: 61  TGDEQGVLHQDNQVITPDGYKTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYS 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A        S +  +A  +    +  + + + PK++S E+             A  + +T
Sbjct: 121 ACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW-------------AGAMDMT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGCF 256
           E + G+D+  I ++   + DG Y ++G K F++    D       ++LA++     +  F
Sbjct: 168 EPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLF 227

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           LVP++  +     GS NG+    +++K+G + +AT  + + N  GFL+G+ N     +  
Sbjct: 228 LVPKISVNTDGSLGSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFT 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAIA 360
           M     L   I  +   + +   A  YA+ RH     GG         +I    ++R + 
Sbjct: 288 MMNYERLAIGIQGLGSAQAAYQMAADYAKERHQGIAAGGSPTGSESDPIIVHGDVRRMLL 347

Query: 361 DIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            I     A  ALS       D AK      +++ A Y  ++ P+ K +           A
Sbjct: 348 TIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMA 407

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    D
Sbjct: 408 QQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVGD 465

Query: 476 LGSSGKKV 483
           L +  +  
Sbjct: 466 LKAQMRAF 473


>gi|31789453|gb|AAP58567.1| putative acyl-CoA dehydrogenase [uncultured Acidobacteria
           bacterium]
          Length = 382

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 148/381 (38%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    L  +    GL   ++   +        +   A  +  +++++ 
Sbjct: 26  PHVMEWDEAQHFPI--ELQPKLAELGLTGVLFPEEYGGAAM--GYVEYATIIEELSRVDG 81

Query: 149 GHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              +S +      ++ +    T    + +   + S ++                 GLTE 
Sbjct: 82  SVGISVAAHNSLCSNHIYQFGTEAQKQKYLAPLASGKH-------------LGAWGLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D +   S   + + G        +   +  +D  + +A  +       +   + + 
Sbjct: 129 GAGSDASGTRSTAVRQNGGWLVNGSKNFITHAIHADTCVAVAVTDREKKSRGISAFIFEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G    + +NK+G R++ T  + F +    L+ D N      +     +  LD   +S
Sbjct: 189 GTPGFSPAKKENKLGLRASETASVIFEDC---LIPDENRLGEEGQGFINAMEILDGGRIS 245

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++ + V +A+     A+ Y++ R   G  + +   ++  +A++A  I AA  L +R A  
Sbjct: 246 IAALAVGIAQGAYESALSYSKERKQFGKAISEFQAIQFKLANMATQIDAARLLMYRAAWM 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  ++E++ A       K +  +++  V  EA++  GG GY ++    + +R+S  
Sbjct: 306 KDNGRKTTKESSMA-------KLFSSEISVNVCEEAIQIHGGYGYTKDYPPEKFWRDSKL 358

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+     L +   + +
Sbjct: 359 CTIGEGTSEIQRLIIAREILQ 379


>gi|294648825|ref|ZP_06726282.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825317|gb|EFF84063.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 375

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 75/373 (20%), Positives = 133/373 (35%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P   A L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KAALAQMGQLGFMGMLVPEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGNDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AAI ++  K  D        ++  S   +   I+ A  +   G   +   L      
Sbjct: 130 SDAAAIKTRAVKDGDDYILNGAKQFITSGHNAGLIIVFAVTDPSAGKKGISAFLVPRDTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSV 325
           G    R++ K+G  ++ T ++  ++        L     G    +  L    +  A  +V
Sbjct: 190 GYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLGKQGEGLKIALANLEGGRIGIAAQAV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA HYA+ R   G  + +   +   +A +A +I AA  L    A   +  + 
Sbjct: 250 GLARAALEEATHYAKERLTFGKPIFEHQAIAFRLASMATEIEAARQLVHYAARLKEAGQP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +M+  V + A++  GG GY+++  I R YR++    I  G
Sbjct: 310 CLNEASMA-------KLFASEMSERVCSSALQVFGGYGYLKDFPIERIYRDARICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   L
Sbjct: 363 TSDIQRLVIARSL 375


>gi|291484441|dbj|BAI85516.1| hypothetical protein BSNT_03021 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 380

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 143/380 (37%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+    P       +    GL    +   +                Y +A  E 
Sbjct: 26  PHAEHVDQTGEFPM--QTFEKMGELGLMGIPFPEEYGGSGGDTIS-------YALAVEEV 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    S  ++ A+ V+L  +P           + E   T+  P+   +     GLTE   
Sbjct: 77  GKACGSTGLSYAAAVSLGASP------LYYFGTEEQKQTHLTPLASGTALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 TPGLTITSPYDKMGVRGSNTAEILLEDVRVPA---ANLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAAYA       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DHNHPFTKEAAYA-------KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   L K
Sbjct: 361 EIGEGTSEIQRLVIARQLLK 380


>gi|307320510|ref|ZP_07599925.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893786|gb|EFN24557.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 593

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 103/514 (20%), Positives = 197/514 (38%), Gaps = 69/514 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LGE ++     E  R A+     L       G R     V+    W  L R  I  G +
Sbjct: 30  ELGEDLVDAILGEAGRFASEEVAPLGDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                 +F        H +  A + +         ++P++T  ++ AL    T  +   +
Sbjct: 90  GLTAPEAFGGQNLP--HMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKATF 147

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K F
Sbjct: 148 LPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQKIF 194

Query: 235 LSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           ++    D       ++LA++         +  FLVP+ L +     G  N +    L++K
Sbjct: 195 ITWGEHDFTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGERNDVFCHSLEHK 254

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G   + T  + + +          G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTMMNNARLAVGMQGVAIAEA 314

Query: 331 SLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA+ R               +I+ P + R +  +      + A+ +  A++ D
Sbjct: 315 ATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIVYACAHAVD 374

Query: 382 EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A +   E A      + ++ PI K +       V +  ++  GG G+IEE   AR+ R+
Sbjct: 375 MAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEETGAARYLRD 434

Query: 437 SPANSILLGSGNAMVLDVLNL---LEKGTNL--FEQLFSTLEQDLGSSGK----KVITIL 487
           +    I  G+     +D++     L  G  +  F      +   + +S +    +    L
Sbjct: 435 ARIAPIYEGTNGIQAIDLVTRKLPLSDGAQVRGFIAELREVAAAVAASNREGFGETAARL 494

Query: 488 RDSISLCK--EDKGLARFLTEKIALASSAAALYR 519
             +++  +   D  L+R    K+A A + A  Y+
Sbjct: 495 DAAVADLEGATDWLLSRLRDGKLAEALAGATAYQ 528


>gi|260557633|ref|ZP_05829847.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408806|gb|EEX02110.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 375

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEEWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSNALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|300933555|ref|ZP_07148811.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 389

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 129/379 (34%), Gaps = 21/379 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  +  D+ E  P     L      G +       F          +         
Sbjct: 29  QQIAPHAKDVDENERFPE--EALEALNASGFNAIHVPDEFGGQGGDSLAAVIVIEEVARV 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +      + L  +  + K+  P I + E                   LTE
Sbjct: 87  CGSSSLIPAVNKLGTMGLILNGSDELKKEVLPSIANGEM--------------ASYALTE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D AA+ ++  +  D         +  +   S  + ++A  +   G   +   +  
Sbjct: 133 REAGSDAAAMKTRAVRDGDEWVINGSKCFITNGGRSSWYTVMAVTDPEAGARGISAFMVH 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G     L++K+G + + T EL F +       ++G+                    
Sbjct: 193 KDDPGFRVGGLEHKLGIKGSPTAELYFEDCRVPASRMIGEEGTGFKTALQTLDHTRPTIG 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +  EA+ Y + R   G  + D    +  +AD+ + I AA  + +  A++ +
Sbjct: 253 AQALGIAQGAFDEAVKYVKERKQFGKSIADFQNTQFMLADMKMKIDAARLMIYTAASNAE 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E      +MA  +K +   +A  V  +A++ +GG G+  +  + R  R++    
Sbjct: 313 RG--FAEGGDKLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPLERMMRDAKITQ 370

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   + K
Sbjct: 371 IYEGTNQICRMVMGRQILK 389


>gi|160945286|ref|ZP_02092512.1| hypothetical protein FAEPRAM212_02805 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443017|gb|EDP20022.1| hypothetical protein FAEPRAM212_02805 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105503|emb|CBL03047.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii SL3/3]
          Length = 389

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 139/384 (36%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ++ D  E+ P     + +    G+    +            ++ +    L  +    
Sbjct: 26  PLAKKVDAEEYFP--KETVEKMGKLGMMGIYFPTEVGGAGGDVLSYVMAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    TP     + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTPEQKAKYLPKLCSGEW-------------LGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RVGCFLVPRL 261
           GTD     +  ++  D  + L+G K F+++   +D FI++A  +           L    
Sbjct: 131 GTDAQGQQTIAKEDGD-YWVLNGSKIFITNAGFADVFIVIAVTDNVLDKRGRPTKLCSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + + +  G    + ++K+G R ++T EL F +        L V     +    +  LD  
Sbjct: 190 IVERTDPGFSVGKAEDKMGIRGSSTCELIFEDCRIPKDRMLGVRGKGFQ--LAMATLDGG 247

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      I Y + R   G  +      +  +A++   + AA  L +  
Sbjct: 248 RIGIASQALGIAEGALEETIAYVKERKQFGRAIAAFQNTQFELAEMKARVEAAKYLVYAA 307

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A    +A   ++      + A   K    + A  V    ++  GG GY  +  I R  R+
Sbjct: 308 ALKKQQAMDGAK--VRYSVEAAQAKLIAARTASDVTRRCLQLFGGYGYTRDYPIERMMRD 365

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+    ++ +   L K
Sbjct: 366 AKITEIYEGTSEVQMMVISGALLK 389


>gi|163800396|ref|ZP_02194297.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
 gi|159175839|gb|EDP60633.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
          Length = 384

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 138/377 (36%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +L+ +   G            +   +           M 
Sbjct: 22  ERLAPMAAEWDEKQIFP--KDVLKEAGELGFLSLYTPEQQGGLGLSRLDASIIFEHLSMG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M+       MVA   T  V   + PK+ + E+                  LTE
Sbjct: 80  CTSTTAFMTIHNMVTWMVASFATDEVKDAFCPKLITGEF-------------LGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++T+   +  D      G  +   +  +D  +++A+  G  G   V   +  
Sbjct: 127 PNAGSDAASLTTSATRQGDNYILNGGKTFISGAGETDVLVVMART-GDAGAKGVSAFVVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
              +G+ Y R + K+G  S  T  + F N        L     G V  MK L    ++ A
Sbjct: 186 ADADGISYGRKEPKMGWNSQPTRAVTFDNVSIAASHLLGEEGQGFVFAMKGLDGGRINIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             SV   + +L +A  Y + R+  G  L     ++  +AD+A ++ AA  L    A+  D
Sbjct: 246 TCSVGTAQQALNQAAQYMQERNQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A     + K +   +   V  +A++  GG GYI+E  + RH+R+   + 
Sbjct: 306 RGDPD------ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPLERHFRDVRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L +   L
Sbjct: 360 ILEGTNEIMRLIIARRL 376


>gi|239996054|ref|ZP_04716578.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii ATCC
           27126]
          Length = 384

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 138/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     ++++   G        S   +   +           M     
Sbjct: 26  PNAAMWDREHHFPV--ETIKKAGELGFCGLYAPESAGGLGLSRLDSSIIFEQLSMGCTTT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++    +  M+A   T  V   W  ++ +                     LTE   G
Sbjct: 84  TAMLTIHNMATWMIATWGTSEVKDMWCDQLVTG-------------DKLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K +DG Y L+G K F+S   S D  +++A+  G  G   V       + 
Sbjct: 131 SDAASLKTKATK-ADGGYVLNGSKVFISGAGSTDVLVVMART-GEDGPKGVSAFAVPANT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G+ Y + + K+G  +  T  + F N      +LLG+                ++ A  S
Sbjct: 189 DGIEYGKAEEKMGWNAQPTRMITFDNVKLDASWLLGEEGQGFKMAMQGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +    A   D   
Sbjct: 249 VGTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAARQMVRMAACKLDNND 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                         + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL 
Sbjct: 309 PDK------TTYCAMAKRFATDVGFNVCNDALQLHGGYGYIKEYPLERHFRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 363 GTNEIMRVIIGRRL 376


>gi|134098043|ref|YP_001103704.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338]
 gi|291007193|ref|ZP_06565166.1| acyl-CoA dehydrogenase-like protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910666|emb|CAM00779.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338]
          Length = 389

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 141/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LR +   GL     D         +   +         
Sbjct: 31  ERLAPNAVEWDQQKHFPV--DVLREAGTLGLGGVYVDELVGGSGLSRFDSVLIFEALATG 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+         + W P + S E                   LTE
Sbjct: 89  DPSIAAYVSIHNMVAGMIDRFGDDEQRRRWLPAMCSME-------------RLGSYCLTE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D  Y L G K F+S    SD ++++A+  G  G   +   + 
Sbjct: 136 PEAGSDAAALQTRAVRDGDH-YVLDGVKQFISGGGNSDVYVVMART-GEPGPKGISTFVV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           +G   GL +   + K+G  +  T ++ F          LG+  +             L  
Sbjct: 194 EGDTPGLSFGPNEKKMGWNAQPTRQVVFQGVRVPATHRLGEEGIGFRIAMAGLDGGRLSI 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G R +L +++ Y   R   G  L D  V++  +AD+A ++ AA  L +R A + 
Sbjct: 254 AACSLGGGRAALDKSLGYVHERSAFGSKLSDFQVLRFKLADMATELEAARMLLWRAAWAL 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A  +  + K        AV  EA++  GG GY+ E  + +  R+   +
Sbjct: 314 DVKDPS------ATRLCAMAKRLATDAGFAVANEALQIHGGYGYLAEYGLEKIVRDLRVH 367

Query: 441 SILLGSGNAMVLDVLNLLEKGT 462
            IL G+   M L +   L + T
Sbjct: 368 QILEGTNEIMRLIISRGLLEAT 389


>gi|37676701|ref|NP_937097.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
 gi|37201244|dbj|BAC97067.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
          Length = 389

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 130/373 (34%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +F P    +L+ +   G            +   +           M     
Sbjct: 31  PNAAVWDETQFFPV--EVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTST 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       MV    T  V   +   + S               +     LTE   G
Sbjct: 89  TAFMTIHNMVNWMVGSFATQEVKSLYCQGLNSG-------------DLLGSYCLTEPNSG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ +   +  D         +   +  +   +++A+  G  G   V   +      
Sbjct: 136 SDAASLKTTATRQGDEYRINGAKAFISGAGETQVLVVMART-GSEGAKGVSAFVVPADAQ 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N    L   L     G    MK L    ++ A  SV
Sbjct: 195 GVSYGRKEPKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINIATCSV 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  L +   ++  +AD+A ++ AA  L    A+  D+   
Sbjct: 255 GTAQQALNLATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFSASKLDKGDP 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G
Sbjct: 315 D------ATAYCAMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEG 368

Query: 446 SGNAMVLDVLNLL 458
           +   M L V   L
Sbjct: 369 TNEIMRLIVARRL 381


>gi|255037570|ref|YP_003088191.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254950326|gb|ACT95026.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 379

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 129/367 (35%), Gaps = 27/367 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSV 156
            F P    LL +    G    +    +          + A          AG +MS  + 
Sbjct: 36  HFDP---DLLHKMGELGFLGMMVAPEYGGGGMDTLAYVLAMEEISKVDASAGVIMSVNNS 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    T    + +  ++ + E             +     L+E   G+D  +  +
Sbjct: 93  LVCWGLEKYGTEAQKQQYLTRLAAGE-------------IIGAFCLSEPEAGSDATSQHT 139

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                 +         W  +   S   +++AQ    +    +   + +    G    R +
Sbjct: 140 TAFPNGNYYLLNGTKNWITNGNTSAVCLVIAQTHPELRHKGINAFIVEKGWEGFSVGRKE 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLA 333
           +K+G R++ T  L FS+        +     G    M +L    +  A  ++     +  
Sbjct: 200 DKMGIRASDTHTLMFSDVPVPAANRIGEDGFGFRFAMNVLNGGRIGIAAQALGIAAGAFE 259

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            ++ Y++ R   G  + D   ++  ++++A  I AA  L ++ A   DE +   + AA A
Sbjct: 260 LSLKYSKERKTFGKPIADHQAIQFKLSEMATKIEAARLLVYKAARLKDEGRDYIQAAAMA 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  ++A  V  EA++  GG GY+ E  + R  R++    I  G+     L 
Sbjct: 320 -------KLYASEVAMWVTTEAVQVHGGYGYVREYHVERLMRDAKITQIYEGTSEIQKLV 372

Query: 454 VLNLLEK 460
           +   L K
Sbjct: 373 IARELLK 379


>gi|260063568|ref|YP_003196648.1| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|257796364|gb|EAR14186.2| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 387

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 156/399 (39%), Gaps = 30/399 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S T + +A  A     Q     P    WD  +  P    + +++   G    +   +   
Sbjct: 14  SETQRMVAESARDFAEQFIR--PHVMEWDASQTFPV--EVFKKAGEYGFMGVLVPVALGG 69

Query: 127 VVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                   I     +  +       + + +    + + L       + W PK+ + E+  
Sbjct: 70  SGMGYHEYIAIIEEISKVDPGIGLSVAAHNSLCTNHILLFGDEEQKQRWIPKLATAEW-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
                          GLTE   G+D   + +  +K  D  + L+G K F++  +S D  +
Sbjct: 128 -----------IGAWGLTEHNTGSDAGGMNTTAKKDGDH-WVLNGAKNFITHGISGDVAV 175

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           ++A+   +     +   + +    G    + ++K+G R++ T EL F +        L  
Sbjct: 176 IIARTGEKGDSRGMTAFVVEKGTPGFSSGKKEDKLGMRASETAELIFEDCRIPDGNRLGP 235

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           V  G ++ MK+L    +    +S+   + +   ++ Y++ R   G  +     +   +A+
Sbjct: 236 VGEGFIQSMKVLDGGRISIGALSLGVAKGAFEASLKYSKERVQFGKPISAFQGISFKLAE 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I AA  +  +     +  K  ++++A A++       +  ++   V  EA++  GG
Sbjct: 296 MATEIEAAELMVHKAGFLKNAGKPVTQQSAMAKM-------YASEVCVRVANEAVQIHGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GYI E  + + YR++   +I  G+     + +   L K
Sbjct: 349 YGYIREFPVEKFYRDAKLCTIGEGTTEIQKVVISKNLLK 387


>gi|149370026|ref|ZP_01889877.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [unidentified eubacterium SCB49]
 gi|149356517|gb|EDM45073.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [unidentified eubacterium SCB49]
          Length = 396

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 137/373 (36%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER +K EF PA    +++    G    + D  +        ++ I    L  +    +  
Sbjct: 46  ERDNKQEF-PA--EQVKKMGELGFLGLMVDPKYGGSGMDAISYVIVMEELSKVDASASVI 102

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   +      +    +    + +  K+ +                     L+E   G+D
Sbjct: 103 VSVNNSLVCYGLETYGSEAQKQKYLTKLATG-------------QSIGAFCLSEPEAGSD 149

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +    + D         W  +   +D ++++AQ +   G   +   + + +  G 
Sbjct: 150 ATSQRTTAIDMGDHYLLNGTKNWITNGGSADFYLVIAQTDKEKGHKGINAFIVEKTWEGF 209

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 210 EVGPKEDKLGIRGSDTHTLNFNDVKIPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 269

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A  Y++ R   G  + +   +   +AD+ L+I AA  L  + A   D   +  
Sbjct: 270 AQGAYEMARDYSKIRKAFGTEICNHQAIAFKLADMHLEIEAARHLVMKSAWEKDNGINYD 329

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A A++ A        K+A  V  EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 330 MSSAMAKLKA-------SKVAMDVTVEAVQVHGGNGFVKEYHVERMMRDAKITQIYEGTS 382

Query: 448 NAMVLDVLNLLEK 460
               + +   L +
Sbjct: 383 EVQKIVISRGLLR 395


>gi|119504203|ref|ZP_01626284.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460206|gb|EAW41300.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 389

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    L  +    G+     D ++    +   AH I    +   +   
Sbjct: 33  PRATDIDRNNEFPM--DLWPKLGALGVLGMTVDEAYGGTNMGYLAHAIVMEEISRASAAV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TPR  + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCLNQIQKNGTPRQREQYLPKLCSGEH-------------IGALAMSEPSA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ E   G   +   + +   
Sbjct: 138 GSDVVSMRLRADKKGDHYILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDS 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A++S   
Sbjct: 198 PGFSRAQKLDKLGMRGSNTCELVFEDCEVPAENILGELNKGVAVLMSGLDYERAVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L   + Y   R      + +  +++  +AD+    AA+ +  + +  + D  +
Sbjct: 258 VGLMQACLDVCVPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  +MA     +A++ +GG+GYI +    R  R++    I  
Sbjct: 318 DSRKDAA-------AVILYTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L + +N
Sbjct: 371 GTSEIRRMLIGRELFRESN 389


>gi|13541951|ref|NP_111639.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325382|dbj|BAB60286.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 384

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 33/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D     P    ++ R    G   +   + +  +       IRA      A    
Sbjct: 27  PRAKEIDAKMEVP--REIIDRMKQLGFFATYIPKEYGGLGMSFPFLIRAIEEISKACPST 84

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++  ++T  A  + +  +  + K +  ++ S                  GL +TE   
Sbjct: 85  ALVLDGALTLFAEPIIMFGSEDLKKRYLTRVASG--------------SVGGLAITEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A I++  +K  D  Y ++G K F+S+  +SD F+  A  +       +   + D +
Sbjct: 131 GSDAAGISTTAEKRGD-KYIINGDKIFISNGRISDFFVFDAVTDPGKRHKGITAFVVDAN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             GL   R  +K+G R ++TVEL F +        +    G  +   I+  LD+  + ++
Sbjct: 190 TPGLKISRDIHKMGIRGSSTVELVFEDMEVPAENIVGELNGGFK--VIMETLDAGRIGIA 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +     AEA+ Y ++R   G  +     ++  IAD+A +I AA  L++  A  + 
Sbjct: 248 AQALGIAEEAFAEAMDYIKQRKQFGTTISSFEGIQFMIADMATEIEAARYLTYVAAEKWQ 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   E +A A++ A         +A  V  +A++  GG GY  +    RH R+S    
Sbjct: 308 HKEDTIEISAMAKLKA-------SDVAVRVTTDALQLFGGYGYTVDLDAERHMRDSKITQ 360

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLF 465
           I  G+     L +   L K TN +
Sbjct: 361 IYEGTNQIQRLVIAKELLKKTNYY 384


>gi|27366926|ref|NP_762453.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
 gi|27358493|gb|AAO07443.1| Branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
          Length = 384

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 132/373 (35%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +F P    +L+ +   G            +   +           M     
Sbjct: 26  PNAAVWDETQFFPV--EVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       MV    T  V   +   + S              ++     LTE   G
Sbjct: 84  TAFMTIHNMVNWMVGSFATQEVKSLYCQGLNSG-------------ALLGSYCLTEPNSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ +   +  D         +   +  +   +++A+  G  G   V   +      
Sbjct: 131 SDAASLKTTATRQGDEYRINGAKAFISGAGETQVLVVMARTGGE-GAKGVSAFVVPADAQ 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N    L   L     G    MK L    ++ A  SV
Sbjct: 190 GVSYGRKEPKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  L +   ++  +AD+A+++ AA  L    A+  D+   
Sbjct: 250 GTAQQALNLATQYVQERKQFGHTLAEFQTVQFRLADMAIELIAARQLVRFAASKLDKGDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   +   V  EA++  GG GYI+E  + R +R+   + IL G
Sbjct: 310 D------ATAYCAMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M L V   L
Sbjct: 364 TNEIMRLIVARRL 376


>gi|296268700|ref|YP_003651332.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091487|gb|ADG87439.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 388

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 130/379 (34%), Gaps = 19/379 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E  P    + +  +   LH      ++          +        A
Sbjct: 26  EKIAPRAAEIDETEEFP--WDVYKDLVAAELHAVHIPEAYGGAGADALATVIVIEEIARA 83

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 + + +      + L  +  + + + P             P+ +        L+E
Sbjct: 84  CASTSLIPAVNKLGTVPLLLAGSEELKQRYLP-------------PVARGEAMFSYALSE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++ ++  +  D         W  ++ +S  + ++A  +   G   +   + +
Sbjct: 131 PEAGSDAASMKTRAVRDGDHYVLNGTKMWITNAGVSQFYTVMAVTDPSAGARGISAFVVE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G+ +   + K+G + + T ++   N        +    TG    +  L    +  A
Sbjct: 191 KDDPGVSFGPKEKKLGIKGSPTRQVILENVRIPAWRMIGEPGTGFKTALATLDHTRITIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +L  AI Y + R   G  + D   ++  +AD+A+ + AA  L++  A +  
Sbjct: 251 AQAIGIAQGALDYAIGYVKERRQFGKRIADFQGVQFMLADMAMKLEAARQLTY-AAAAKS 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E              +   K      A  +  +A++ +GG GY  +  + R  R++    
Sbjct: 310 ELVMNGTPVDDLTFFSSAAKCAASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQ 369

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 370 IYEGTNQIQRMVMARHLLK 388


>gi|237743848|ref|ZP_04574329.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
 gi|229432879|gb|EEO43091.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1]
          Length = 378

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 137/404 (33%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +       +    
Sbjct: 52  ALEVPEKYGGPGLKRVDVAALIEEMAIADAGFATTISASGLAMKPVFISGNEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            + +                     LTE   G+D +A  +   K  +  Y L+G K F++
Sbjct: 112 LVLAGG--------------LGAFCLTEPGAGSDASAGRTTAVKDGNE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|296808727|ref|XP_002844702.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238844185|gb|EEQ33847.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 431

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 145/415 (34%), Gaps = 32/415 (7%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F      EL  L + V           A    P+         R D+    P    + ++
Sbjct: 42  FAPPTEDELNELRDTVR--------EFAKREIPE-----EVAARTDQENQFP--PEMWKK 86

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      +  +  +    QAH +    +   +        + S    + + L  +P
Sbjct: 87  FGEAGFLGVTAEEKYGGLGMGYQAHCVVMEEISRASGSIGLSYAAHSQLCVNQLCLNGSP 146

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P + S E                 L ++E   G+D+ ++ ++ + +  G    
Sbjct: 147 EQKERFLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTKAKAVDGGYVLN 193

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E   G   +   + +    G    R  +K+G R + T E
Sbjct: 194 GTKMWITNGPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGE 253

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F +       +LG +N     + +   L  L  +   +  M+  L   + Y   R   
Sbjct: 254 LIFEDVFVPHANVLGKVNKGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQF 313

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD+   +AA+ A ++  A   D++    E           +  +  
Sbjct: 314 GMPIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSPEGTQVRTQDCAGSILYAA 373

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 374 ERATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 428


>gi|167840067|ref|ZP_02466751.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 393

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 129/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 32  PRAAEVDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGASLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKRKYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +  D         W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADRRGDRYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAG- 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S      R        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 316 -GSAHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|309810327|ref|ZP_07704164.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308435719|gb|EFP59514.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 389

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 142/380 (37%), Gaps = 31/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P     L   I  G+     D  +  +                    +
Sbjct: 33  PHAADVDDKSRFP--QEALDALIEAGMQAPHVDEQYGGMGIDALGTCIVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L     +   + PK+ S E                  GL+E+  G
Sbjct: 91  SLIPAVNKLGSMPVILGGGEEIKAKYLPKLASGE-------------AMFSYGLSEREAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +D A++ ++ ++  D         W  ++  S+ + +LA  +        +   + + S 
Sbjct: 138 SDTASMKTKAKRDGDHYVLNGQKSWITNAGESEFYTVLAVTDPDGERGRNISAFVVEKSD 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G  +   + K+G + + T EL F N          +     + +KI +  LD   +++ 
Sbjct: 198 EGFSFGEPERKLGIKGSPTRELHFDNCRIPAD---RIVGAEGDGLKIALRTLDHTRVTIG 254

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A+     A+ Y + R   G  + +   ++  +AD+A+ +  A  + +  A    
Sbjct: 255 AQAVGIAQGALDYAVGYVKERQQFGKAIAEFQAIQFMLADMAMKVETARQMVYVAA---- 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            AKS  ++A  +   A   K +   +A  V  +A++ +GG+GY+++  + R  R++    
Sbjct: 311 -AKSERQDADLSFFGAA-AKCFASDVAMEVTTDAVQLLGGAGYVKDFPVERMMRDAKITQ 368

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   + KG
Sbjct: 369 IYEGTNQIQRLVMGRAVLKG 388


>gi|169632452|ref|YP_001706188.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151244|emb|CAO99930.1| acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 593

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 91/517 (17%), Positives = 195/517 (37%), Gaps = 58/517 (11%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRS 110
            +++L  +         +E+A+ A   T  L       G R++  +V     +    R+ 
Sbjct: 27  ANEKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + A  +              SV +   ++   +   
Sbjct: 87  AEGGWIGLGADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALSSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++   +D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 313

Query: 335 AIHYA----RRRHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA    + R  +G          ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATARLQGRSAAGVQSPSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRD 433

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +  
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIA 526
             E + + +F+ E+ A      +SAA  Y   +  ++
Sbjct: 493 ATEIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLS 529


>gi|289673864|ref|ZP_06494754.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 387

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA   + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + P++ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|169797690|ref|YP_001715483.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184156452|ref|YP_001844791.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213155516|ref|YP_002317561.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215485044|ref|YP_002327285.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|239503089|ref|ZP_04662399.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|301347774|ref|ZP_07228515.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511935|ref|ZP_07237172.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301597247|ref|ZP_07242255.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332853580|ref|ZP_08434832.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332869303|ref|ZP_08438701.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|169150617|emb|CAM88526.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|183208046|gb|ACC55444.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213054676|gb|ACJ39578.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987328|gb|ACJ57627.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|322506318|gb|ADX01772.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323516189|gb|ADX90570.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332728544|gb|EGJ59917.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332732811|gb|EGJ64026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 375

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEEWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|291453688|ref|ZP_06593078.1| fatty acid acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291356637|gb|EFE83539.1| fatty acid acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 128/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L       LH      S+          +            +
Sbjct: 33  PHAAAVDEEARFP--QEALDALTAADLHAVHVPESYGGAGADALATVLVIEEVARVCASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + K +               P+ K        L+E   G
Sbjct: 91  SLIPAVNKLGSLPVVLSGSEELKKKYL-------------GPLAKGDGMFSYCLSEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +    
Sbjct: 138 SDAAGMKTKAVRDGDFWVLNGVKRWITNAGVSEYYTVMAVTDPEKRSKGISAFVVEKGDE 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  ++
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRITIAAQAL 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L++  A   +  ++
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPIGDFQGVQFMLADMAMKLEAARQLTYAAAAKSERVEN 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 318 D------LTFFGAAAKCYASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 372 TNQVQRIVMARNL 384


>gi|332875584|ref|ZP_08443396.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|332736157|gb|EGJ67172.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 375

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEEWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERMTFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|229030226|ref|ZP_04186283.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228731070|gb|EEL81995.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 381

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEDNGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|241767637|ref|ZP_04765282.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361440|gb|EER57913.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 376

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 88/394 (22%), Positives = 147/394 (37%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   RWDK    P       +  H GL          P  
Sbjct: 5   QDQEMIRDAVRDFAQTELW-PNAARWDKEHHFP-------KEAHQGLAALGAYGICVPEE 56

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              AH        L   LE         ++A  V       +   +      R++     
Sbjct: 57  FGGAHLDYVT---LALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDW----L 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLA 247
            P+ +  +     LTE   G+D +A+ +   K  D  Y ++G K F++S  +    I++A
Sbjct: 110 TPLARGEMLGAFCLTEPHVGSDASALRTTAVKQGDE-YVINGVKQFITSGKNGHVAIVIA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   L   +  G    RL++K+G  S+ T ++ F N       L+G    
Sbjct: 169 VTDKGAGKKGMSAFLVPTNTPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIGAEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  SV   R +   A+ Y++ R   G  + +   +   +AD A 
Sbjct: 229 GYKIALGALEGGRIGIAAQSVGMARSAFEAALAYSKERESFGTPIFNHQAVGFRLADCAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +  A   D  K   +EAA A       K +  +MA  V + A++ +GG G 
Sbjct: 289 QIEAARQLIWHAAAMRDAGKPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGV 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|217969167|ref|YP_002354401.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506494|gb|ACK53505.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 377

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 135/392 (34%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QEL R +     Q     P    WD+    P     L      G    +    +      
Sbjct: 7   QELIRDSMRAFAQ-ERLAPFAAEWDRNHTFP--REALNELAELGALGMVVPEEWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
               +               ++S   +    +     +    + W               
Sbjct: 64  YMSLVLTLEEIAAGDGATSTIVSVQNSLPCGILNRFGSDAQKEAWLK------------- 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +        LTE   G+D +AI +   +  +        ++  +   +D  I+ A  
Sbjct: 111 PLARGEKLGCFCLTEPHVGSDASAIRTSAVRDGNEWVLNGVKQFITTGKHADVAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGP 308
           +   G   +   L   +  G    R++ K+G +++ T ++ F +        +     G 
Sbjct: 171 DKAAGKKGITCFLVPANAPGYQVGRIEEKMGQKASDTTQILFEDCRIPADSVVGKEGEGY 230

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L    +  A   +   R +L  A+ YA+ R   G  + +   +   +AD+A  +
Sbjct: 231 RIALSNLEAGRIGIAAQCLGMARAALEAAVKYAQERESFGKPIFEHQAVNFRLADMATQL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D  +   +EA+ A       K +  +MA  V ++A++  GG GY+ 
Sbjct: 291 EAARQLVWHAASLKDAGRPCLKEASMA-------KLFASEMAERVCSDAIQVHGGYGYVT 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   L
Sbjct: 344 DFPVERIYRDVRVCQIYEGASDIQKLVIGRAL 375


>gi|11498631|ref|NP_069859.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304]
 gi|2649568|gb|AAB90217.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304]
          Length = 397

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 87/408 (21%), Positives = 156/408 (38%), Gaps = 39/408 (9%)

Query: 61  LGEYVLSCT---AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           L EY+L+      +E AR  A    P         E  D+ E  P    L +++   G  
Sbjct: 2   LAEYILTEEQKAIKEAAREFAEKEFPN------YVEECDREEKFP--FELWKKAAQLGFI 53

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +                +          +  +V  +  + L       K + P
Sbjct: 54  GMSIPEEYGGQGLGILDSCLVVEEF-WRVDAGVGQIVGTVFGSEQITLFGNEEQKKKYLP 112

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                        P+ K         TE + G+D+A I ++  K  D  Y ++G K F++
Sbjct: 113 -------------PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDE-YVINGTKMFIT 158

Query: 237 SP-MSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +  ++D +I+LA+ +         +   L +    G+   +LKNK+G R+N T E+ F N
Sbjct: 159 NGSIADYYIVLARTDPNPPKRHHGMSVFLVEREREGVQANKLKNKLGIRANDTAEVVFKN 218

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  L+G+             +  +  A  +V   + +   A HYAR R V    L 
Sbjct: 219 VRVPKENLIGEEGKGFYQTMIFFNVTRIPVAFQAVGLAQGAFELAYHYARNREVFERKLA 278

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D  V +  +A +  ++ AA  L+++ A   D      +       +  + KY+  K A  
Sbjct: 279 DFQVTQEKLAKMRTELEAARLLAYQAAYFQD------KMGMPDPGLTAMAKYYTAKAAQF 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ EA++  GG G++ E+ I+R YR+     I  G+    +  +   L
Sbjct: 333 IVNEALQIHGGYGFMGEQHISRMYRDVRILEIYEGTREIEMEIIGRSL 380


>gi|293611198|ref|ZP_06693496.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826449|gb|EFF84816.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 375

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  AI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|256393670|ref|YP_003115234.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359896|gb|ACU73393.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 389

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 129/377 (34%), Gaps = 24/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   +   L        +                       +
Sbjct: 31  PFAADVDEHSRFP--QEALDALVSSDLAAVHVAEQYGGQGADALATCIVIEEVARVCASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  V L  +  + + +               P+   S      L+E   G
Sbjct: 89  SLIPAVNKLGSMPVILSGSEELKQKYL-------------TPLAAGSGMFSYCLSEPDAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D        +W  ++ +S+ + ++A  +       +   + +    
Sbjct: 136 SDAAGMKTRADRDGDDYVLNGVKRWITNAGVSEYYTVMAVTDPTARSKGISAFVVEKGDE 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    M+ L    +  A  ++
Sbjct: 196 GVTFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMRTLDHTRVTIAAQAL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A +Y + R   G  + D   ++  +AD+A+ + AA  L++  A   +   S
Sbjct: 256 GIAQGALDYASNYVKERKQFGKPIADFQGIQFMLADMAMKLTAARQLTYTAAAKSERGDS 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V  +A++ +GG GY ++  + R  R++    I  G
Sbjct: 316 D------LTYFGAAAKCFASDVAMEVTTDAVQLLGGYGYTKDYPLERMMRDAKITQIYEG 369

Query: 446 SGNAMVLDVLNLLEKGT 462
           +     + +   +  G 
Sbjct: 370 TNQVQRVVMARQVLAGG 386


>gi|227498693|ref|ZP_03928837.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
 gi|226904149|gb|EEH90067.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21]
          Length = 377

 Score =  284 bits (726), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 137/360 (38%), Gaps = 30/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +++++   GL   +    +          +  A +Y   +L  G +   +  +A+ +A 
Sbjct: 40  EIIKKAGDMGLLNLVVPEEYGG---PGLDSVTIAMIY--EELGKGCVGVATSIAANALA- 93

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    +   I   +     +  +          LTE   G+D   ++++  K  D 
Sbjct: 94  --------SYPILIAGNDEQKKYQCDLLNNGGLAAFALTEPDAGSDAGGVSTKAVKEGDH 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  +  ++D+F++ A      G   +   +      G    R ++K+G R +
Sbjct: 146 YVLNGSKVFITNGGIADSFLVFANTRKTGGIRGLTCFIVPKGTPGFSVGRKEDKMGIRPS 205

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHY 338
            T EL   +        +       +  +I +  LDSA      ++V   + +L  A HY
Sbjct: 206 NTCELILEDVVVPESMRVGREG---QGFRIAMQTLDSARPFVASVAVGVAQSALDIAAHY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +    +++  +AD+A+ +  A  +  +     D+      EAA       
Sbjct: 263 ARERRQFGQPISSFQLIQGMVADMAMKVHGARLMVQQACWMRDQGLEFGMEAAM------ 316

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +K +   +A  V  +A++ +GG GY+++  + +  R++    I  G+     L + N +
Sbjct: 317 -SKCFASDVAMEVTTDAVQIMGGYGYMKDYPMEKKMRDAKILQIYEGTNQIQRLVIANKI 375


>gi|206971677|ref|ZP_03232627.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|218230994|ref|YP_002367222.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218897497|ref|YP_002445908.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228901095|ref|ZP_04065301.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228952869|ref|ZP_04114938.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228958775|ref|ZP_04120487.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229070017|ref|ZP_04203293.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|229150738|ref|ZP_04278952.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|229178865|ref|ZP_04306225.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|229193927|ref|ZP_04320840.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|206733662|gb|EDZ50834.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|218158951|gb|ACK58943.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218546035|gb|ACK98429.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228589568|gb|EEK47474.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228604630|gb|EEK62091.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228632825|gb|EEK89440.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228713118|gb|EEL65017.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228800914|gb|EEM47819.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228806825|gb|EEM53375.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228858546|gb|EEN03000.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 381

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|326468794|gb|EGD92803.1| isovaleryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326481405|gb|EGE05415.1| isovaleryl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 431

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 139/390 (35%), Gaps = 24/390 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R D+    P    + ++    G      +  +  +    QAH
Sbjct: 59  EFAKREIPE-----EVAARTDQQNQFP--PEMWKKFGEAGFLGVTAEEKYGGLGMGYQAH 111

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L   +        + S    + + L  +P   + + P + S E           
Sbjct: 112 CVVMEELSRASGSIGLSYAAHSQLCVNQLCLNGSPEQKERFLPGLISGE----------- 160

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++ ++ + +  G        W  + P +D  ++ A+ E   
Sbjct: 161 --KIGALAMSEHSAGSDVVSMKTKAKAVDGGFVLNGTKMWITNGPDADFIVVYAKTEPDA 218

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G   +   + +    G    R  +K+G R + T EL F +       +LG +N     + 
Sbjct: 219 GSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFVPHANVLGQINKGVRVLM 278

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+  L   + Y   R   G  +    +++  +AD+   +AA+ 
Sbjct: 279 EGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGMPIAHNQLIQGKLADMYTKLAASR 338

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++  A   D++   S+              +  + A     +A++ +GG+GYI E   
Sbjct: 339 AFTYNTARQVDQSAVSSDGTQVKTQDCAGAILYAAERATECTLDAIQLMGGNGYINEIPA 398

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++    I  G+     + +     K
Sbjct: 399 GRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 428


>gi|156546419|ref|XP_001607123.1| PREDICTED: similar to acyl-coa dehydrogenase [Nasonia vitripennis]
          Length = 423

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 135/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK           R     GL        +         H +    L   +   
Sbjct: 63  PKAAEIDKKNHFDELRPFWRELGKLGLLGITVKEDYGGTGGGYLDHVVIQEELSRASAAI 122

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 123 SLSYGAHSNLCVNQIHRNGTEEQKHKYLPKLCSGEH-------------IGALAMSEPGA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLED 264
           G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +         +   + +
Sbjct: 170 GSDVVSMKLKAEKKGD-YYLLNGNKFWITNGPDADTLVVYARTDPNAAKKQHGITTFIIE 228

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F N       +LG  N     +     L  L  A
Sbjct: 229 KGMEGFSTAQKLDKLGMRGSNTCELIFENCKVPAANVLGQENKGVYVLLSGLDLERLVLA 288

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+ +   +  YA+ R   G  + +  +++  IAD+   + ++ +  + +A + D
Sbjct: 289 GGPLGIMQAACDVSFEYAQTRKQFGKNIAEFQLIQGKIADMYTRLCSSRSYLYSVARACD 348

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 ++             +C + A     +A++ +GG+GYI + S  R  R++    
Sbjct: 349 NGHVNGKD-------CAAVILYCAENATKTALDAIQILGGNGYINDYSTGRLLRDAKLYE 401

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 402 IGAGTSEIRRMVIARAI 418


>gi|228908265|ref|ZP_04072110.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228921228|ref|ZP_04084557.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228939660|ref|ZP_04102242.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228965477|ref|ZP_04126563.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228972521|ref|ZP_04133128.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979131|ref|ZP_04139478.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|229044240|ref|ZP_04191914.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|229109949|ref|ZP_04239530.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|229130893|ref|ZP_04259824.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|296503074|ref|YP_003664774.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|228652575|gb|EEL08482.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228673516|gb|EEL28779.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228725111|gb|EEL76394.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228780606|gb|EEM28826.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228787204|gb|EEM35176.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228794207|gb|EEM41725.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228819998|gb|EEM66041.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228838443|gb|EEM83755.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228851306|gb|EEM96115.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|296324126|gb|ADH07054.1| Acyl-CoA dehydrogenase, short-chain [Bacillus thuringiensis BMB171]
 gi|326940251|gb|AEA16147.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 381

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGIEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|89055461|ref|YP_510912.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865010|gb|ABD55887.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 591

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 99/532 (18%), Positives = 190/532 (35%), Gaps = 73/532 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
               S   +E  +++      L+A     G   +   V     +     +    G     
Sbjct: 34  RDFTSAILEEAGKISTEVLAPLNAVGDTQGCVMENGVVRTPDGFKDAFGQMSEGGWPGID 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F  +            ++  + +        +  +AS +    +      + PK+ 
Sbjct: 94  MPEEFGGMGLPYVMNTAVGEMFSSSNMAFTMYQGLTHGAASAILAHGSDAQKATYLPKMV 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE   GTD+  + ++ +   DG Y +SG K F+S+  
Sbjct: 154 SCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQKIFISAGE 200

Query: 240 SDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++L ++ G       V  F+VP+ L +     G+ NG+   +++ K+G   
Sbjct: 201 HDMSDNIIHLVLGKITGGPEGIKGVSLFIVPKFLVNDDGSLGARNGVSCGKIEEKMGIHG 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           N+T  + +    G+LLG+ +     +  M     L   +  VS   V+   A+ YA+ R 
Sbjct: 261 NSTCVMNYDEATGYLLGEDHKGMRAMFTMMNEARLGVGMQGVSQAEVAYQNALEYAKDRL 320

Query: 344 VSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
             G               LI  P ++R + +       A A     ++  D A    ++ 
Sbjct: 321 Q-GRDVTGIKNPDGPADPLIVHPDIRRNLMEQKSFAEGARAFLLWGSSLIDAAHRGDDKD 379

Query: 391 A--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A     ++ P+ K +       +  +A +  GG GYIEE  +++  R++    I  G+  
Sbjct: 380 ADGLISLLTPVIKGFLTDKGFDMAVQAQQVYGGHGYIEEWGMSQFARDARIAMIYEGANG 439

Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
              LD++                L QD G        +++       E  G+  FLT   
Sbjct: 440 VQALDLVG-------------RKLAQDGGKHVMAFFDLVKGFAKDNAEVDGMGEFLT--- 483

Query: 509 ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            L +++  L  A M      F++    +   + +  L G  +  H+     +
Sbjct: 484 PLKAASKDLQAAAM-----YFMQ----EGMKNPNNALSGSTDFMHLFGHTCM 526


>gi|229060210|ref|ZP_04197579.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|228719092|gb|EEL70704.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 381

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAINGFEDNGKKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKPISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + R+ R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERYIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|145237726|ref|XP_001391510.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus niger CBS 513.88]
 gi|134075984|emb|CAK48178.1| unnamed protein product [Aspergillus niger]
          Length = 431

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 76/429 (17%), Positives = 154/429 (35%), Gaps = 36/429 (8%)

Query: 40  DSLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
              L  L+   P        ++L  L E V     QE  R      P+         + D
Sbjct: 28  PPALRTLVMKHPKDFVPPTEEDLLELRERV-----QEFTR---REIPE-----EVAAQTD 74

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSP 154
                PA   + ++    G      +  +  +    QAH +    +   +   A    + 
Sbjct: 75  AQNEFPA--EMWKKLGEAGFLGITANEEYGGLGMGYQAHCVVMEEISRASGSIALSYAAH 132

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + ++L  TP   + + P + S E                 L ++E   G+D+ ++
Sbjct: 133 SQLCVNQLSLNGTPEQKERFLPGLLSGE-------------KVGALAMSEHSAGSDVVSM 179

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  + +  G        W  + P +D  ++ A+ E       +   + + +  G    R
Sbjct: 180 KTTAKAVDGGFLLNGTKMWITNGPDADYIVVYAKTEPEKASKGITAFVVEKTFKGFSCAR 239

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +K+G R + T EL F + F     +LG++N     + +   L  L  +   +  M+ +
Sbjct: 240 KLDKLGMRGSNTGELVFEDVFVPKENVLGEVNRGVKVLMEGLDLERLVLSAGPLGIMQAA 299

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D + +    A 
Sbjct: 300 LDLVLPYTHVRKQFGMPIAHNQLIQGKLADMYTKLAASRAYTYATARQIDNSAAEGSGAL 359

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                      +  + A     +A++ +GG+GYI E    R  R++    I  G+     
Sbjct: 360 IRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRR 419

Query: 452 LDVLNLLEK 460
           + +     +
Sbjct: 420 MVIGRAFNR 428


>gi|302671840|ref|YP_003831800.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316]
 gi|302396313|gb|ADL35218.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316]
          Length = 386

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 140/386 (36%), Gaps = 39/386 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P     D+ E  P     +++    G       + +         + +    L  +    
Sbjct: 26  PNAIEVDETEVFPM--ETVKKMQKYGFMGIPIPKEYGGQGCDPLTYIMCVEGLAKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +      +    T    + +               P+ K       GLTE   
Sbjct: 84  AVIVSAHTSLCCDPIMTYGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPMA 130

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE-----GRVGCFLVPR 260
           GTD   + ++     DG  + L+G K F+++   +D +I++A  +               
Sbjct: 131 GTDAQGVQTKAVLSEDGKEWILNGSKCFITNGEVADIYIIIAYTDIVEDKKGRKQKKFSA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + +    G  +   +NK+G R ++T EL F +         N+     +   I ++ LD
Sbjct: 191 FIVEKGTPGFTFGTKENKMGIRGSSTYELIFQDCHIPA---ENLLGARGKGFPIAMHTLD 247

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   + +AE      + Y + R   G  +      +  +A++A    AA  L +
Sbjct: 248 GGRIGIAAQALGIAEGALDRTVEYVKERKQFGRAIGAFQNTQFQLANMATQCEAARLLVY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A++       S EAA A       K +  ++A  V  +A++  GG GYI E  + R  
Sbjct: 308 QAADAKKNKDVYSVEAAKA-------KLFAAEVAMDVTTKAVQLHGGYGYIREYEVERMM 360

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+     + +   L K
Sbjct: 361 RDAKITEIYEGTSEVQRMVISGALLK 386


>gi|256819569|ref|YP_003140848.1| acyl-CoA dehydrogenase domain-containing protein [Capnocytophaga
           ochracea DSM 7271]
 gi|256581152|gb|ACU92287.1| acyl-CoA dehydrogenase domain protein [Capnocytophaga ochracea DSM
           7271]
          Length = 381

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q +   A     +     P    WD+ +  P    + R++   G    +   ++    
Sbjct: 7   ETQRMVADAAKEFAE-KYIRPHVMEWDESQEFPV--EVFRKAGELGFMGVLVPEAYGGSG 63

Query: 129 RKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                +      +  +       + + +    + +    + +  + W PK+ S E+    
Sbjct: 64  LDYHDYIAIVEEISKVDPSIGLSIAAHNSLCTNHILSFGSEQQKQRWLPKLASGEW---- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
                        G+TE   G+D   + +   K  D  + L+G K F++   +    +++
Sbjct: 120 ---------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTKNFITHGKTGQIAVVI 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+   +     +   + +    G    + +NK+G R++ T E+ F +        L  V 
Sbjct: 170 ARTGEKGNKHAITAFVVERGTKGFSSGKKENKLGMRASETAEMIFQDCRIPDANRLGEVG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G ++ MKIL    +    +S+   + +   ++ YA+ R   G  LID   +   +AD+A
Sbjct: 230 DGFIQAMKILDGGRISIGALSLGIAKGAYEASLKYAKERMQFGKRLIDLQAVGFKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I A+  L  + A   +  +  +   A A++       +  ++   V  EA++  GG G
Sbjct: 290 TEIEASELLLHKSAFQKNNGQRVTLSGAMAKM-------YASEVCVRVATEAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y ++  + + +R+S   +I  G+     L +   ++K
Sbjct: 343 YTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQIDK 379


>gi|254284111|ref|ZP_04959079.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680314|gb|EED36663.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 389

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P     D+    P    + R+    GL        +    +    H +    +   +   
Sbjct: 33  PRAADIDQSNEFPM--DMWRKFGDMGLLGITVKEEYGGSDIGYLGHVVAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHKNGSEAQKQKYLPKLCSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K            W  + P +D +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLKAEKRGGRYVLNGNKMWITNGPDADTYVIYAKTDPNAGSRGMTAFIVERDS 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A++S   
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFEDCEVPAENVLGEEGRGVAVLMSGLDYERAVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M   L + I Y   R   G  +    +++  +AD+   ++AA AL + +A + D  +
Sbjct: 258 VGIMMACLDQVIPYIHDRKQFGQSIGKFQLIQGKVADMYTHLSAARALLYAVARACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 ECRKDAA-------AVILFAAEKATQMALDAIQLLGGNGYINEFPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 371 GTSEIRRMLIGRELFNDTQ 389


>gi|213967035|ref|ZP_03395185.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301385220|ref|ZP_07233638.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059613|ref|ZP_07251154.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302130161|ref|ZP_07256151.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213928357|gb|EEB61902.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
          Length = 387

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 142/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    PA   + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAEISPRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + PK+ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCINQINRNGNPAQKARYLPKLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 174 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGAL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  IAD+
Sbjct: 234 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|15230664|ref|NP_190116.1| IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA
           dehydrogenase [Arabidopsis thaliana]
 gi|110816334|sp|Q9SWG0|IVD_ARATH RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|4995051|emb|CAA73227.1| Isovaleryl-CoA Dehydrogenase [Arabidopsis thaliana]
 gi|6967096|emb|CAB72479.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
 gi|110738147|dbj|BAF01005.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana]
 gi|332644499|gb|AEE78020.1| isovaleryl-CoA-dehydrogenase [Arabidopsis thaliana]
          Length = 409

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  ER DK    P    L +      LH     +      +    H I    +   +   
Sbjct: 52  PHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSV 111

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 112 ALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEH-------------VGALAMSEPNA 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +K+  G        W  + P ++  ++ A+ + + G   +   + +   
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N F      L+     V  +     L  L  A   
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGP 278

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K
Sbjct: 279 LGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGK 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++          T     + A  V  +A++C+GG+GYI E +  R  R++    I  
Sbjct: 339 VDPKD-------CAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGA 391

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 392 GTSEIRRIVIGRELFK 407


>gi|260551298|ref|ZP_05825499.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405612|gb|EEW99103.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 375

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KDTLTQMGQLGFMGMLVSEEWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  AI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|330895555|gb|EGH27865.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 342

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 3/339 (0%)

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                Y L GHKWF S+PM DAF+ LAQ +  + CFL+PR   D + N    QRLKNK+G
Sbjct: 1   DPGQAYELVGHKWFCSAPMCDAFLALAQTDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLG 60

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           N SNA+ E+EF     +++G+       + +M  +   D  I S + MR +L +A H+  
Sbjct: 61  NWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQALTQATHHCA 120

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R VSG +L +QP+M+  +AD+AL+  AA AL+ R+  + D  +    E  + R++  + 
Sbjct: 121 YRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHEKRFVRLVTAVG 179

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS   GSGN   LDVL  L K
Sbjct: 180 KYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRTLSK 239

Query: 461 GTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
                + LF  L    G       I  L+ +     + +  AR LTE IA+A     L  
Sbjct: 240 EPGALDALFDELGDGHGDRHLAAHIGTLKAAFRDTGDIQYRARQLTEDIAIALQGKLLLE 299

Query: 520 AGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           AG   ++D F+  R + +    +  L    +   ++   
Sbjct: 300 AGNAAVSDGFIAGRLV-SSGRVYGALPKGVDVETLLQRA 337


>gi|296166929|ref|ZP_06849346.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897806|gb|EFG77395.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 590

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 141/531 (26%), Positives = 232/531 (43%), Gaps = 57/531 (10%)

Query: 32  IGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y +D  L   +A +      +VV   L  +GE +    A+  A   ++N P+L  
Sbjct: 32  VGLNWYLTDPTLRFTMAYYLQPEELAVVEPHLVRIGELMGGPVAR-WAEETDHNPPRLER 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    +V   PA     +R++   L      R      +  +     A  YL+ Q 
Sbjct: 91  YDRWGHDISQVVM-PASFTQSKRAV---LGAQQALRDDARAAKISSGLSLFASNYLLNQA 146

Query: 147 EAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           + G   +       +   VA      V +    K  S E+                  LT
Sbjct: 147 DIGMGCALGTGGGMVQSLVAAYAPADVREHVLAKFASGEWAGE-----------TAQLLT 195

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  FL
Sbjct: 196 ERTGGSDLGALETTATRAGD-SWILNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVANFL 254

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGP 308
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                G 
Sbjct: 255 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTGDTGPSDGKGLGR 314

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + ++     L  A+  +   R +L E++ YARRRH  GG LID+P+++R +A++ +D+ +
Sbjct: 315 MMELTNAARLGIALFGLGNARRALVESLCYARRRHAFGGALIDKPLIRRKLAEMIVDVES 374

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A+ F    + +  + R+     A    P+TK   C++     ++A+E  GG GYIE  
Sbjct: 375 AQAMVFDGTGATNHRQPRAMRQRIA---VPVTKLKACRLGITAASDAIEIRGGIGYIETW 431

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL----GSSGKKVI 484
            +AR  R++  N+I  G  N + LDV   +E+ T   E L + L   +    G    +++
Sbjct: 432 PVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHEPLLARLRDAVSVSDGDETTRLV 490

Query: 485 TILRDSISLC-------KEDKGLAR--FLTEKIALASSAAALYRAGMNDIA 526
               + +            D   AR   L + +    +AA L      + A
Sbjct: 491 AGRVEDLDAAIIAWSKLDRDTAEARPFPLAQFMGDVYAAALLTEQAAWERA 541


>gi|251779321|ref|ZP_04822241.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243083636|gb|EES49526.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 379

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 148/402 (36%), Gaps = 41/402 (10%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSF 124
              +E+AR    N   P++          +  EF   A+  L       GL    + + +
Sbjct: 10  EMIKEMARQFAENELKPRVLEND------ENSEFPIEAYKKLGAL----GLIGIPYPKEY 59

Query: 125 EPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + A      + A     + ++ S+ S  ++    +    K + P + S  
Sbjct: 60  GGTGGDYLSYVLAVEEISKVDASFGISYSVTTSLCSGGII-NAASEEQKKKYLPDVLSG- 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                             GLTE   G+D     +  +K  D  Y L+G K F+++  +S+
Sbjct: 118 ------------KKLGSFGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSE 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A  +   G   +   + +    G    +++NK G +S    EL F N        
Sbjct: 165 TFLVFALTDKSKGSKGLSAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENCKVPAENL 224

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +     G    MK L    +  A   +     +   A  Y + R   G  L     +   
Sbjct: 225 VGAEGKGFGIAMKALDGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFK 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ L+I  A  + ++ A    E +  S  AA A       K  C  +A  V  E+++ 
Sbjct: 285 MAELELEIEKAKYILYKAAMDKQEGRPYSVSAAKA-------KLSCTDVAMKVTVESVQM 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG+GY++E ++ R  R++    I  G+     L +   + +
Sbjct: 338 LGGNGYMKEYNVERMMRDAKITQIYEGTNEIQKLIISGSIFR 379


>gi|269126814|ref|YP_003300184.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|269128311|ref|YP_003301681.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311772|gb|ACY98146.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
 gi|268313269|gb|ACY99643.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 390

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 142/416 (34%), Gaps = 32/416 (7%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A+FP+    E   L       T +ELA              P   + D+    P     L
Sbjct: 3   ADFPAYAPSEEHELLRR----TVRELAET---------KIAPYAAQVDESGAFP--QEAL 47

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
              +   LH      ++          +            +  + + +      + L  +
Sbjct: 48  DALVAAELHAVHIPEAYGGAGADALATVIVIEEVARVCASSSLIPAVNKLGTMPLLLAGS 107

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             + + +              AP+ +        L+E   G+D A++ ++  +  D    
Sbjct: 108 EELKRRYL-------------APVARGEAMFSYALSEPEAGSDAASMKTRAVRDGDAWVL 154

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  ++ +S  + ++A  +   G   +   + D    G+ +   + K+G + + T 
Sbjct: 155 NGVKMWITNAGVSQYYTVMAVTDPGKGARGISAFVVDKDDEGVSFGPPERKLGIKGSPTR 214

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           ++   +       ++G                 +  A  ++   + +L  A+ Y + R  
Sbjct: 215 QVILEDVRVPAERMIGAEGTGFKTALATLDHTRITIAAQALGIAQGALDYALGYVKERRQ 274

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A+ I AA  L++  A   +    R E       ++   K   
Sbjct: 275 FGRPVADFQGVQFMLADMAMQIEAARQLTYHAAVKSER-VMRGESVPDLTFVSSACKCLA 333

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +A  V  +A++ +GG GY  +  + R  R++    I  G+     + +   L K
Sbjct: 334 SDVAMKVTTDAVQLLGGYGYTRDFPVERMMRDAKITQIYEGTNQIQRMVMARQLLK 389


>gi|322370195|ref|ZP_08044757.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320550531|gb|EFW92183.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 568

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 129/524 (24%), Positives = 228/524 (43%), Gaps = 42/524 (8%)

Query: 33  GMNAYSSDSLLV-ALIANFPS---VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           GMN +  D +L   +   +P       +  +  G  V +  A   +   + + P+L  Y 
Sbjct: 13  GMNYWQYDPVLQHEVERTYPGDRGWAEERFDEFGAIVGTTVA-PNSDTIDEHGPELRQYD 71

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             G   + +E+HPA           G+    + R+        +        YL+A  + 
Sbjct: 72  RHGRLVNDIEYHPAQLENEELVYGAGIVADSF-RAPPDRDDPASMLHHLTMDYLLAYADV 130

Query: 149 GHLMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           G     ++T+   + L      +     ++  ++ +REYD   +  M          LTE
Sbjct: 131 GLTCPVAMTAGVALVLERFDHGSDGSLSEFFDRLTAREYDDLLQGAMF---------LTE 181

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLV 258
           ++GG+D+ A  +  ++  DG + L+G KWF S+  S A + LA+          +  FLV
Sbjct: 182 RQGGSDVGATETVAERTDDG-WELTGEKWFCSNVDSGAILTLARTPDAPDGTEGLSLFLV 240

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P    +G  +G   +RLK+K+G  S  T E+EF      L+G+L      + +M  L  +
Sbjct: 241 PGTTSNGERDGAFVRRLKDKLGTVSVPTGEVEFRGAEAHLVGELESGFRYMSEMLNLERI 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A  S   +  +L E+   A  R   G  +   P+M+R + ++A+   AATA +F    
Sbjct: 301 ANAFASCGLIGRALLESKVRAANREAFGSTIDRYPLMRRDLVEMAVAHEAATAFTFDAGR 360

Query: 379 SFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +FD      E+A A  R++ PI K    +MA  V + AME  GG+GY+ +    R  R++
Sbjct: 361 AFDRYHRGDEDAFALMRLLVPIAKSRTGRMAVDVASYAMEIHGGNGYVNDFVTNRLLRDA 420

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ----------DLGSSGKKVITIL 487
               I  G+ N + LDVL  L +       L  T ++          DL ++ +  +  L
Sbjct: 421 QVLPIWEGTSNILSLDVLRALAREDAHEPALALTRDRLDGIEHDDLADLVATTRDELDGL 480

Query: 488 RDSI-SLCKEDKGLARF----LTEKIALASSAAALYRAGMNDIA 526
           ++++ +L  E++  A+     L E +    +AA L      ++A
Sbjct: 481 QEALVTLATEEEEYAQLHAKELAEYVFDVYTAALLLSEADGELA 524


>gi|229079713|ref|ZP_04212246.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228703553|gb|EEL56006.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 371

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 21  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 78

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 79  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 125

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 126 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 184

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 185 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 244

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 245 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 304

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 305 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 357

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 358 EIQRLVIARHL 368


>gi|321474240|gb|EFX85205.1| hypothetical protein DAPPUDRAFT_300359 [Daphnia pulex]
          Length = 621

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 126/566 (22%), Positives = 215/566 (37%), Gaps = 55/566 (9%)

Query: 10  LAMNQVHQPSDSLFALN--QPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLG 62
           L     H P       N  Q    +  N++  D+LL       L A   S V  EL + G
Sbjct: 27  LNNYSTHIPFSKAKEGNFIQDAPHLE-NSFEGDTLLQRNLQRILPAEAYSNVKDELSMFG 85

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             V +   + L R      P L          +KV    +W  L + S  +GL    ++R
Sbjct: 86  ARVATDIYK-LGRECELIPPYLKLQDAWANPQNKVVTCESWKELKKISAREGLISLAYER 144

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P  +  +  I+ ++ YL A     +    ++T  +   L  +  +           E
Sbjct: 145 D--PKHQGFSRLIQMSKNYLFAPSSGLYSCPLAMTDGAAKTLEVS-GLKD-------HGE 194

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDG--IYCLSGHKWFLSSPM 239
                 +   +     G  +TEKRGG+D+A  T +   +  +   +Y L G+K+F S+  
Sbjct: 195 SFKNLTSRDPEKFWTSGQWMTEKRGGSDVAGGTETLAIQDPNKENMYKLYGYKFFSSATD 254

Query: 240 SDAFIMLAQV----EGRV--GCFLVPRLL--EDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +D  + LA+V     G++  G   +   L   D   N L   RLK K+G +   T EL  
Sbjct: 255 ADIALTLARVVDPATGKITSGTKGLSLFLIYVDQPSN-LHLMRLKQKLGTKQLPTGELLL 313

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+         +  M  +  L +A  SVS MR  ++ A  Y+ RR   G ++ +
Sbjct: 314 DGMTAELISPPGRGVASISQMLNITRLHNASASVSAMRRIISLARDYSNRRVAFGKLIRN 373

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMA 408
            P+  R +AD+ L+  A  +L           +      E+    R++ P+ K +  K  
Sbjct: 374 HPLHVRTLADMELECRAGFSLFMEAGRLLSLEENGTPTIEQQQLLRLLLPLLKLYTGKQC 433

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQ 467
             V++E +E  GG GY+E+  I    R++    I  G+ N + LDVL  L K    +   
Sbjct: 434 MKVVSEGLESFGGQGYMEDTGIPVILRDAQVTPIWEGTTNILSLDVLRALAKSEGQVLVA 493

Query: 468 LFSTLEQDLGSSGKKVIT------------ILRDSISLCKEDKGLARFLTEKIALASSAA 515
               ++  L S+    +             ++  +     + + +AR     +A   + A
Sbjct: 494 FHQRIQGVLDSTTNPSLAECCTQLEKYRSQLISFAQKNPDQLEYVARDFAFGLARTLAGA 553

Query: 516 ALYRAGM--------NDIADVFLENR 533
            L                A+ +L  R
Sbjct: 554 LLLEHASWGRAVDSDRAAAERWLGQR 579


>gi|241554280|ref|YP_002979493.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863586|gb|ACS61248.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 375

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 143/397 (36%), Gaps = 35/397 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +S  A++ AR             PG  + D+    P     L+     GL   +   ++ 
Sbjct: 10  ISDLARDFARD---------RLAPGAAKRDREHLFP--REELKEMGELGLLGMLVPEAYG 58

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +   +  L        + + PK+ S E+ 
Sbjct: 59  GSDTGVVAYAAALEEIAAGDGTCSTIMSVHSSVGCVPILKFGAEEQRQRFLPKLASGEW- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                         G  LTE + G+D + + ++ ++  D        ++  S    D  I
Sbjct: 118 ------------IGGFALTEPQAGSDASNLKTRARRDGDHYVIDGSKQFITSGKNGDVII 165

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A  +  VG   +   +      G    R++ K+G  S+ T ++ F++        L  
Sbjct: 166 VFAVTDLDVGKKGITAFIVQTDTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLGA 225

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    +  L    +  A  +V   R +   A  YAR R   G  + +   +   +AD
Sbjct: 226 EGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARDYARERTAFGKPIFEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ I AA  L F  A+  +       EA+ A       K +  +MA  V ++A++  GG
Sbjct: 286 MAVRIEAARQLVFHAASLREAGLPCLSEASMA-------KLFASEMAERVCSDAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 339 YGYMADYPVERIYRDVRICQIYEGTSDVQRMVIARNL 375


>gi|332307811|ref|YP_004435662.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175140|gb|AEE24394.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 385

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 148/399 (37%), Gaps = 29/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L+   Q  A  A     Q  A  P   +WDK    P    +++++   G         
Sbjct: 3   FDLTEDQQAFADTARQFAEQ--ALAPNAAKWDKEHHFP--KDVIQQAGELGFCGLYTSEE 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
              +   +           M       +M+    +  M+A    P +   W P + +   
Sbjct: 59  DGGLGLSRLDSSIIFEQLSMGCTATTAMMTIHNMATWMIAKWGKPELKDKWCPDLVTG-- 116

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA 242
                       +     LTE   G+D AA+ +  +   D  Y L+G K F+S    +D 
Sbjct: 117 -----------KLLASYCLTEPGSGSDAAALRTSAKLDGDE-YVLNGSKMFISGAGETDV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
            +++A+  G  G   +   L      G+ Y + + K+G  +  T  + F N       LL
Sbjct: 165 LVVMARTGGE-GPKGISAFLVPADAKGVVYGKAEEKMGWNAQPTRLITFDNVRISQINLL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+                ++ A  S+   + +L  A  Y + R   G  L     ++  +
Sbjct: 224 GEEGQGFSFAMQGLDGGRVNIATCSIGTAQQALNTATAYMQERTQFGKPLAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A   D     SE +AY      + K +   +   V  +A++  
Sbjct: 284 ADMATELVAARQMVRLAAFKLDN--KDSERSAY----CAMAKRFATDVGFEVCNQALQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + RH R+   + IL G+   M + V   L
Sbjct: 338 GGYGYIQEYPLERHVRDVRVHQILEGTNEIMRMIVGRRL 376


>gi|5596622|gb|AAD45605.1|AF160729_1 isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana]
 gi|21592889|gb|AAM64839.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
          Length = 409

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  ER DK    P    L +      LH     +      +    H I    +   +   
Sbjct: 52  PHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSV 111

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 112 ALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEH-------------VGALAMSEPNA 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +K+  G        W  + P ++  ++ A+ + + G   +   + +   
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N F      L+     V  +     L  L  A   
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGP 278

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K
Sbjct: 279 LGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGK 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++          T     + A  V  +A++C+GG+GYI E +  R  R++    I  
Sbjct: 339 VDPKD-------CAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGA 391

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 392 GTSEIRRIVIGRELFK 407


>gi|121603373|ref|YP_980702.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592342|gb|ABM35781.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 376

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 83/393 (21%), Positives = 142/393 (36%), Gaps = 29/393 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE  R A     Q   + P   RWDK  + P      +     G +       F      
Sbjct: 7   QEQVRDAVRAFAQAELW-PHAARWDKEHYFP--KEAHKGLAALGAYGICVPEEFGGANLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
                                +S +    + + +    P   K W               
Sbjct: 64  YVTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNPAQKKQWL-------------M 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQ 248
           P+ +  +     LTE   G+D +++ +   K  DG Y LSG K F++S  +    I++A 
Sbjct: 111 PLAQGDLLGAFCLTEPHTGSDASSLRTTAVKDGDG-YVLSGVKQFITSGQNGQVAIVIAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +   G   +   +      G    RL++K+G  S+ T ++ F N       L+G     
Sbjct: 170 TDKGAGKKGMSAFIVPTDAPGYSASRLEDKLGQHSSDTAQVNFDNCRIPAENLIGAEGEG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       +  A  SV   R +   A+ YA+ R   G  + +   +   +AD A  
Sbjct: 230 YKIALGGLEGGRIGIAAQSVGMARSAFEVAVAYAKERQSFGSAIFNHQAVGFRLADCATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L +  A+  D  +   +EAA A       K +  +MA  V + A++ +GG GY+
Sbjct: 290 LEAARQLIWHAASLRDAGRPCLKEAAMA-------KLFASEMAEKVCSAAIQTLGGYGYV 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  + R YR+     I  G+ +   + +   L
Sbjct: 343 SDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|331014342|gb|EGH94398.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 387

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 142/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    PA   + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAEISPRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + PK+ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 174 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGAL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  IAD+
Sbjct: 234 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|88798867|ref|ZP_01114449.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297]
 gi|88778347|gb|EAR09540.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297]
          Length = 593

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 91/511 (17%), Positives = 171/511 (33%), Gaps = 71/511 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEY-----VLSCTAQELARMANYNTPQLHAYGPGGER-- 93
             L  ++           + +G       ++     E  +        L      G+   
Sbjct: 9   RDLQFVLHEVLDS-ESHYQSIGAEEATPDMIDAILSEAGKFCE---DVLAPLNRVGDEEG 64

Query: 94  ----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                 +V     +     + + +G         F      ++           A    G
Sbjct: 65  CTYNDGEVTTPTGFKEAYAQWVENGWPSLSHKEEFGGQGLPESIGAAVNEFVSEANWSWG 124

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S  + + + L  T    + +  K+ S E+  T             + LTE   G+
Sbjct: 125 MYPGLSHGAMNTIELHGTDEQKETYLTKLVSGEWTGT-------------MCLTEPHCGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + S+ +   DG Y ++G K F+SS   D       I+LA++ G       +  F+V
Sbjct: 172 DLGILKSKAEPNGDGSYAITGTKIFISSGEHDMAENIVHIVLARLPGAPEGTKGISLFIV 231

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           P+ L DG+ N +    +++K+G   NAT  + F    GFL+G  +     +        L
Sbjct: 232 PKFLPDGTRNDVKCGSIEHKMGIHGNATCVMNFDAAKGFLIGPEHQGLKCMFTFMNFARL 291

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
            +A+  V+   +S   A+ YA+ R                  +I  P ++R +       
Sbjct: 292 GTAMQGVASAELSFQGALEYAKDRLAMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAFA 351

Query: 367 AAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIG 420
                +    +   D  K   +EA           + PI K +  ++        ++  G
Sbjct: 352 EGGRVMMHAASQLVDVVKYSKDEAKAKEADELLSFLTPIAKAFLTEVGTEAANHGVQVYG 411

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G+I E  + +  R++    +  G+     LD+L                +    G S 
Sbjct: 412 GHGFIAEWGMEQIVRDNRIAQLYEGTTGIQALDLLG-------------RKVLMSQGESL 458

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALA 511
           K    I+        E++ L + L EK+A  
Sbjct: 459 KGFTKIVHKFCKANAENETL-KPLVEKLAAL 488


>gi|308048737|ref|YP_003912303.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307630927|gb|ADN75229.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 385

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 133/373 (35%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +++R+   G            +   +                 
Sbjct: 26  PHAAEWDEKHHFP--KDVIQRAGELGFCSLYTPEEAGGLGLPRLDSALIFEELSKGCTAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++    +  MVA   T  +   W P + + E                   LTE   G
Sbjct: 84  TAMITIHNMATWMVASWGTETLKDQWCPSLVTGE-------------KLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ ++  D  Y ++G K F+S   +   +++    G  G   +  +       
Sbjct: 131 SDAASLRTKAERDGDH-YVINGSKMFISGAGATELLVVMCRTGEDGPKGISAIAVPADAE 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y + ++K+G  +  T  + F N    +   L     G    MK L    ++ A  S+
Sbjct: 190 GISYGKAEDKMGWNAQPTRLVTFENVRVPVANLLGEEGQGFTFAMKGLDGGRINIAACSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +    A   D    
Sbjct: 250 GTAQAALERAQQYMTERKQFGKPLAAFQALQFKLADMATELVAARQMVRLAAFKLDSNDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                        + K +   +   V  EA++  GG GYI E  + RH R+   + IL G
Sbjct: 310 EKTA------YCAMAKRFATDVGFTVCNEALQIHGGYGYIREYPLERHVRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M L V   L
Sbjct: 364 TNEIMRLIVARRL 376


>gi|291412758|ref|XP_002722640.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain
           [Oryctolagus cuniculus]
          Length = 432

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 134/360 (37%), Gaps = 31/360 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALM 165
           ++     GL     D  +          +               +    +     ++   
Sbjct: 94  IQGLFQQGLMGIEVDTKYGGTGASFFSTVLVIEELARVDASVAIVCDIQNTIINKLIKKH 153

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      + PK+               T       L+E   G+D  ++ +  +K  +  
Sbjct: 154 GTEEQKATYFPKLI--------------TEKLGSFCLSEAGAGSDSFSLKTTAEKKGNYY 199

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  ++  +D F+++A V+  +G   +   L D    G    + +NK+G R+++
Sbjct: 200 ILKGAKMWISNAGQADLFLVMANVDPALGYKGITSFLVDRDTEGFHIGKPENKLGLRASS 259

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYA 339
           T  L F N        L  V  G    + I   L+   + ++   + LA+        Y 
Sbjct: 260 TCPLTFENVKVPESNILGQVGHGYKYAIGI---LNEGRIGIAAQMLGLAQGCFDYTIPYI 316

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L D   ++  +A +A  + AA  L++  A   +  +   +EA+ A      
Sbjct: 317 KERMQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGRPFIKEASMA------ 370

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  ++A    ++ +E +GG GY ++  + +++R+S    I  G+ N  +  +  +++
Sbjct: 371 -KYYASEIAGLTTSKCIEWMGGVGYTKDYPVEKYFRDSKIGVIYEGASNIQLNTIAKVID 429


>gi|126732007|ref|ZP_01747810.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
 gi|126707539|gb|EBA06602.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
          Length = 593

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 99/538 (18%), Positives = 190/538 (35%), Gaps = 75/538 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           E L    +     E  ++A      L+      G   +   V     +     +    G 
Sbjct: 30  EDLDRDTVQAILDEAGKVARDVLAPLNVVGDTEGCVLENGVVRTPKGFKDAFDQVREGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  F                +  A +        +  + S +    T      + 
Sbjct: 90  TALDCDPEFGGQGLPYVVATAVGEQFSAANMAFNMYQGLTHGAYSAIHTHGTEDQKATFL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P++ + E+  T             + LTE   GTD+  + ++ +   DG + ++G K F+
Sbjct: 150 PRMVTCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSHKITGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       V  F+VP+ L +     G  N +   +++ K+
Sbjct: 197 SAGDHDMSDNVVHLVLAKIPGGPDGIKGVSLFIVPKFLVNEDGSLGDRNAVSVGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + +    G+LLG+ +     +  M     L   +   +   V+   A+ YA
Sbjct: 257 GIHGNSTCVMNYDGATGYLLGEAHKGMRAMFTMMNEARLGVGLQGYAQAEVAYQNALAYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           + R   G               LI  P ++R++ D    +  A A  +  A   D A   
Sbjct: 317 KDRLQ-GRDVTGAKNPDGPADPLIVHPDIRRSLMDQKSFVEGARAFVYWGAAMIDRAHRN 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S++ A     +M P+ K +       +  +A +  GG GYIEE  +++  R++    I  
Sbjct: 376 SDKDADGLISLMTPVIKGFLTDRGFDMCTQAQQVYGGHGYIEEWGMSQFARDARIAMIYE 435

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           G+     LD++   L + G       F  ++  L  +  K     +  +           
Sbjct: 436 GANGVQALDLVGRKLAQDGGKHVMAFFDMVKSYLAEAKGKDEAFDKAFLD---------- 485

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
                  L +++  L  AGM      F++N       + +  L G ++  H+   + L
Sbjct: 486 ------PLKAASKDLQGAGM-----YFMQN----GMKTPNAALAGSYDFMHLFGHVCL 528


>gi|229145127|ref|ZP_04273519.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228638325|gb|EEK94763.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
          Length = 381

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    +++               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQEYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAVNGIEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|26990765|ref|NP_746190.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985765|gb|AAN69654.1|AE016600_4 isovaleryl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 424

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 68  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASV 125

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 126 ALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEH-------------IGALAMSEPNA 172

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 173 GSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDW 232

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F          L    G V  +   +  +  ++S   
Sbjct: 233 KGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRVLMSGLDYERVVLSGGP 292

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  +
Sbjct: 293 TGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGE 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 353 TTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 405

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 406 GTSEIRRMLIGRELFNETR 424


>gi|229170663|ref|ZP_04298307.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228612823|gb|EEK70004.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621]
          Length = 381

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTLSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKFL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAINGFEDNGKKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKPISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + R+ R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERYLRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|297528548|ref|YP_003669823.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297251800|gb|ADI25246.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 386

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 135/361 (37%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++ +S   GL        +  +      K      L          + + +      +
Sbjct: 39  QDIIEKSKEMGLFGLSIPEEYGGLGLSMVGKCAIYEELGKTHNGYTTLIGAHTGIGTVGI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             + T    + + PK+ + E+                  LTE   G++ AAI +   +  
Sbjct: 99  VELGTEEQKQRYLPKMATGEW-------------IGAFALTEPSAGSNAAAIKTTAVRKG 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  ++  +  F ++A  +   G   +   + +    G    +++ K+G R
Sbjct: 146 DRYIINGSKHYITNAVDAHVFTVMAVTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLR 205

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
            + + EL F N        L     G V  +KIL       A  ++      L   + YA
Sbjct: 206 GSHSAELFFDNLEVPAENVLGREGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +I+Q  ++  +A++++ I   ++  +R+A   D+     +EAA       I
Sbjct: 266 EQREQFGKPIIEQQAIQHMLAEMSMLIEVLSSTVYRVAWMVDQKMRVVKEAA-------I 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++   +   A++  GG GY+++  I R++R++    I  G+       + + L 
Sbjct: 319 AKLFGSEVYNKIADMAVQIHGGLGYMKDYPIERYFRDARITKIYEGTSEIQRNIIASELR 378

Query: 460 K 460
           K
Sbjct: 379 K 379


>gi|254486755|ref|ZP_05099960.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214043624|gb|EEB84262.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 593

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 99/533 (18%), Positives = 188/533 (35%), Gaps = 81/533 (15%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRS 123
           S   +E  ++ +     L+      G R +  V + P  +     +    G         
Sbjct: 38  SAIFEEAGKLTSEVLAPLNIIGDKEGCRLENGVVYTPTGFKDAFAKVKEGGWPGLDMPEE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F               ++  +          +  +AS +    T      + P + S ++
Sbjct: 98  FGGQNMPYIVGTAVGEMFSASNQAFTMYQGLTHGAASAILAHGTQAQKDTYLPNMVSCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   GTD+  + ++     DG Y ++G K F+SS   D  
Sbjct: 158 TGT-------------MNLTEPHCGTDLGLMRTKAVPQGDGSYKITGQKIFISSGEHDMA 204

Query: 243 ----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++EG       V  F+VP+ +       G  NG+    ++ K+G   N+T 
Sbjct: 205 ANIIHLVLAKIEGGPEGIKGVSLFIVPKFIVKEDGSLGDRNGVAVGSIEEKMGIHGNSTC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLGD +     +  M     +   +  ++   V+   A+ YA+ R     
Sbjct: 265 VMNYDGATGYLLGDEHKGMRAMFTMMNEARIGVGMQGLAQADVAYQNALAYAKDRLQGRA 324

Query: 348 ------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
                        LI  P ++R++ D    +  A A     AN  D A    ++ A    
Sbjct: 325 VTGAENPNGPADPLIVHPDIRRSLMDQKSFVEGARAFILWGANLIDAAHRSEDKDADGLV 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            +M P+ K +   +   +  +A +  GG GYIEE  +++  R++    I  G+     LD
Sbjct: 385 SLMTPVIKGFLTDVGYDMTVKAQQIYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALD 444

Query: 454 VLN--LLEKGTNLFEQLFST----LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           ++   L + G       F      ++++ G   +     L    +  K+           
Sbjct: 445 LVGRKLAQDGGKHVMAFFDMLKTFIKENAGQDAEFDAAYLEPLKAASKD----------- 493

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
                 AA +Y          F++N       + +  L G  +  H+   + L
Sbjct: 494 ----LQAAGMY----------FMQN----GMKNPNNALAGSTDFMHMFGHVCL 528


>gi|89092373|ref|ZP_01165327.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083461|gb|EAR62679.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 385

 Score =  283 bits (725), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 78/384 (20%), Positives = 142/384 (36%), Gaps = 27/384 (7%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P   +WD+ +  P    +LR +   G            +   +           M   
Sbjct: 24  FEPHAAKWDEEQIFPV--EVLRSAGEMGFCGLYSPEDVGGLGLSRLDASIIFEQLAMGCT 81

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                ++    +  M+A        + W P++ +              +      LTE  
Sbjct: 82  STTAFITIHNMATWMIADFGNEDTRQQWCPELTAG-------------TKLASYCLTEPN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A++ +  ++  D  Y L+G K F+S   S   +++    G  G   +     D  
Sbjct: 129 AGSDAASLKTTARREGDN-YILNGSKIFISGAGSTDVLVVMARTGEDGPKGISAFAVDAK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIM 323
             G+ Y R ++K+G  S  T  + F +        L N   G    MK L    ++ A  
Sbjct: 188 AEGIVYGRKEDKMGWNSQPTRMITFEDVVVPASALLGNEGDGFKIAMKGLDGGRINIATC 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +L  A  Y   R   G  L +   ++  +AD+A ++ AA  +    A   D  
Sbjct: 248 SIGTAQAALNRARDYMHERKQFGKELANFQALQFKLADMATELVAARQMVRMAAAKLDAN 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                          + K +   +   V  EA++  GG+GYI+E  + R+ R++  + IL
Sbjct: 308 HPDKTA------YCAMAKRFATDVGFNVADEALQIFGGNGYIKEYPMERYIRDNRVHRIL 361

Query: 444 LGSGNAMVLDVLN--LLEKGTNLF 465
            G+   M + V    L+E   +L 
Sbjct: 362 EGTNEIMRVIVARRVLMEDAADLL 385


>gi|332557636|ref|ZP_08411958.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides WS8N]
 gi|332275348|gb|EGJ20663.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides WS8N]
          Length = 591

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 102/527 (19%), Positives = 188/527 (35%), Gaps = 71/527 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           S   +E  ++A      L+      G R +   V     +     +    G      D  
Sbjct: 38  SAVLEEAGKLARDVLAPLNRVGDMQGCRLENGVVRTPEGFAEAFVQLKEGGWTALDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +         +     +++ A +        +  + S +    T    + W PK+ S ++
Sbjct: 98  YGGQGLPYVMQTAVGEIFVSANMAFNMYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+  G       V  F+VP+ L +     G  N +   ++++K+G   NAT 
Sbjct: 205 ENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--- 344
            L +    G+LLG+L+     +  M     L   +   +    +   A+ YAR R     
Sbjct: 265 VLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNAVAYARDRLQGRS 324

Query: 345 -SGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
            SG          LI  P ++R + D    +  A AL+F  A   D +  + +  A    
Sbjct: 325 LSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLI 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           A +  GG GY+EE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           ++                  +     GK  +   +   S  KE++  AR       L  +
Sbjct: 445 LVG----------------RKLAAEGGKPAMAFFQMIRSFLKENEEDARLKGFLEPLKQA 488

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +    +A M      F          +    L G ++   ++  L L
Sbjct: 489 SKDTQKAAM------FFA---EKGMKNPDEALAGSYDFMTMMGHLCL 526


>gi|149915945|ref|ZP_01904469.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b]
 gi|149810268|gb|EDM70114.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b]
          Length = 598

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 93/542 (17%), Positives = 183/542 (33%), Gaps = 83/542 (15%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           + L     +    E  ++A+     L+      G   +   V     +          G 
Sbjct: 30  DELDRDFTAAVLDEAGKIASDVLAPLNVVGDRQGCTLENGVVRTPDGFKDAFDTLREGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +               ++  A +        +  + + +    +    + + 
Sbjct: 90  TALDCDPEYGGQGLPYLISTSVGEMFSSANMAFNMYPGLTHGAYNTIHAHGSEAQKRTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ + E+  T             + LTE   GTD+  I ++ +   DG Y +SG K ++
Sbjct: 150 PKMVTCEWGGT-------------MNLTEPHCGTDLGLIRTKAEPAEDGTYRISGQKIWI 196

Query: 236 SSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++         +  F+VP+ L +     G+ N L    L+ K+
Sbjct: 197 SAGEHDMCENIIHLVLAKLPDAPEGTKGISLFIVPKFLVNEDGSLGARNALSCGGLEQKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    GFL+G+ +     +  M     L   +   +   V+   A+ +A
Sbjct: 257 GIHGNATCVMNYDGATGFLVGEPHKGMRAMFTMMNEARLGVGLQGYAQGEVAYQNALGFA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R   G               +I  P ++R + D    +  A A +F  A+  D     
Sbjct: 317 LDRLQ-GRDVTGTQAPDKPADPIIVHPDVRRNLMDQKAFVEGARAFTFWGASLLDAGHRA 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +  A     +M P+ K +           A + +GGSG+  E  + +  R++    I  
Sbjct: 376 GDAQAEQMVSLMTPVIKGFLTDKGFETTVLAQQTLGGSGFTREWGLEQFVRDARITMIYE 435

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFST----LEQDLGSSGKKVITILRDSISLCKEDK 498
           G+     LD++   L + G       F      ++++ G         L    +  K+  
Sbjct: 436 GTNGIQALDLVGRKLAQNGGKAIMAFFEMIKGYIKENSGHDPAFDAQFLEPLKAASKD-- 493

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
                          AA +Y          F++N       + +  L G ++  H+   +
Sbjct: 494 -------------LQAAGVY----------FMQN----GMKNPNNALSGSYDFMHLFGHV 526

Query: 559 YL 560
            L
Sbjct: 527 CL 528


>gi|291539138|emb|CBL12249.1| Acyl-CoA dehydrogenases [Roseburia intestinalis XB6B4]
          Length = 384

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 77/385 (20%), Positives = 143/385 (37%), Gaps = 39/385 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    +++    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEAFPA--ETVKKMQKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +   + + E                   LTE   
Sbjct: 84  GVVVSAHTSLCIDPIMTYGTEEQKQKYVKPLATGE-------------KLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGAQTKAVLDGDE-WVLNGSKCFITNGKVADVYIVIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + D    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD 
Sbjct: 190 IVDKGAPGFSFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGPEGKGFPIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  I AA  L ++
Sbjct: 247 GRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMATRIEAAQLLVYK 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K  S EAA A       K +  + A AV  E ++  GG GYI E  + R  R
Sbjct: 307 AAMAKATQKVYSVEAAKA-------KLFAAETAMAVTTEVVQLFGGYGYIREYDVERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+     + +   L K
Sbjct: 360 DAKITEIYEGTSEVQRMVISGALLK 384


>gi|296138786|ref|YP_003646029.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026920|gb|ADG77690.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 386

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 129/379 (34%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  +  D+ E  P     L   +  G +       +                    
Sbjct: 29  RDIAPHAKDVDEKERFP--QEALDALVASGFNAIHVPEEYGGQGADSVATCIVIEEVARV 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +      + L  +  + +   P + S E                   L+E
Sbjct: 87  CGSSSLIPAVNKLGTMGLILNGSEELKQHVLPSLASGE-------------AMASYALSE 133

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D A++ ++ +K  D         W  +   S  + ++A  +   G   +   +  
Sbjct: 134 REAGSDAASMRTRARKDGDDWVLNGSKCWITNGGKSTWYTVMAVTDPEKGANGISSFIVH 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G      ++K+G + + T EL F       +  +    TG    ++ L        
Sbjct: 194 KDDPGFSVTGYEHKLGIKGSPTAELAFEECRIPAMRMIGEEGTGFKTALQTLDHTRPTIG 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  AI Y + R   G  + D   ++  +AD+A+ + AA  + +  A   +
Sbjct: 254 AQAVGIAQGALDVAIDYIKERKQFGTSISDFQGIQFMVADMAMRLEAARLMVYTAAARAE 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +           ++  +K +   +A  V  +A++ +GG+GY  +  + R  R++    
Sbjct: 314 RGEKN------LGFISSASKCFASDVAMDVTTDAVQLLGGAGYTRDFPVERMMRDAKITQ 367

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L +
Sbjct: 368 IYEGTNQVQRVVMSRQLLR 386


>gi|196248430|ref|ZP_03147131.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196212155|gb|EDY06913.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 569

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/518 (21%), Positives = 215/518 (41%), Gaps = 41/518 (7%)

Query: 38  SSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
            +D  L+A +  +          ++LE   E+ L+   +          P+L  Y   G 
Sbjct: 16  EADPNLLANLKRYLDDELYQYAEEKLESFYEFCLTEVDRRAVHTDREGQPRLMKYDRFGN 75

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
              +V  +  +    +++   G+   +  +    + ++  +    A+ Y+++Q E G   
Sbjct: 76  DISEVWVNEGYEQTAKQTYETGIVGYV-HKPIPELGKQGNYIYSYAQGYILSQAEPGFYC 134

Query: 153 SPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +  + +A ++       +   + P + S       +             LTE++GG+D
Sbjct: 135 PVTLTMATAYVLEHFADHELKTRYLPHVISTGEIELYEGATF---------LTERQGGSD 185

Query: 211 IAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRLLE 263
           + A   +     D  Y L G K+F  ++      ++LA+++G       +  FLVP   E
Sbjct: 186 VGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSLFLVPWRNE 244

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +AI 
Sbjct: 245 DGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNLSRVCNAIA 304

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV  M+ +L EA  YA RR   G  L D P+++  +AD+       T+  F +   FD  
Sbjct: 305 SVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFEMVALFDRV 364

Query: 384 KSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R++ 
Sbjct: 365 MTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVTPRLLRDAQ 424

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
             ++  G+ N + L+VL L+ K           + +   +  K  +  + D + L     
Sbjct: 425 VLTVWEGTANILALEVLRLMRK---------YRIHERFAAEMKARLERVADEMKLLARPV 475

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +GL   +     L   A  +       +A+   +   
Sbjct: 476 AEGLKELVAALARLGGQAEEVQTFHAKTVANRMCDVYL 513


>gi|323524745|ref|YP_004226898.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381747|gb|ADX53838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 595

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 93/438 (21%), Positives = 163/438 (37%), Gaps = 57/438 (13%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D  +       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYQQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + + + PK+ S  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            + ++ +   DG Y +SG K F+SS   D       ++LA++         +  F+VP+ 
Sbjct: 177 ILRTKAEPNGDGSYSISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+++G+ N     +  M    
Sbjct: 237 IPNEAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    V+   ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEVAYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-----TNLFEQLFSTLE 473
            GG G+I E  + ++ R++  N I  G+     LD+L     G        F +L S   
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVSEFV 476

Query: 474 QDLG--SSGKKVITILRD 489
           +  G     ++ +  L D
Sbjct: 477 EAEGIKPEMQEFVNPLAD 494


>gi|327481927|gb|AEA85237.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 387

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 139/376 (36%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    PA   + ++    GL        +        AH +    +   +   
Sbjct: 31  PRAEAIDQDNLFPA--DMWKKFGEMGLLGVTVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +     P     + PK+   E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGNPEQKARYLPKLIRGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G       +K+G R + T EL F +        L V  G V+ +  +  LD   + ++G
Sbjct: 196 KGFSRGNKFDKLGMRGSNTCELFFDDVEVPEENVLGVENGGVKVL--MSGLDYERVVLAG 253

Query: 328 -----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                M+  L   + Y   R   G  + +   ++  +AD+   + A+ A  + +A + D 
Sbjct: 254 GPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQACDR 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I
Sbjct: 314 GETTRKDAAG-------VILYTAENATQMALQAIQILGGNGYINEFPTGRLLRDAKLYEI 366

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 367 GAGTSEIRRMLIGREL 382


>gi|326382029|ref|ZP_08203722.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199455|gb|EGD56636.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 389

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 126/376 (33%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P         + +G +       F+                    + A
Sbjct: 35  PHAKDVDENARFPE--EARAALVANGFNAVHVPEQFDGQGADSVAACIVIEEVARVDVSA 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  +     P I S E                   L+E+  G
Sbjct: 93  SLIPAVNKLGTMGLILSGSDELKAKVLPSIASGE-------------AMASYALSEREAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +K  D         W  +   S  + ++A  +   G   +   +      
Sbjct: 140 SDAASMKTRARKDGDSWVLNGSKCWITNGGKSTWYTVMAVTDPEKGANGISAFMVHKDDP 199

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     L++K+G + + T EL F N       ++GD                      +V
Sbjct: 200 GFTVGPLEHKLGIKGSPTAELYFENCTIPEDRVIGDEGTGFKTALATLDHTRPTIGAQAV 259

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  AI Y + R   G  +     ++  IAD+A+ + AA  + +  A   +  + 
Sbjct: 260 GVAQGALDAAIAYVKDRKQFGKSISQFQGVEFMIADMAMKVEAARLMVYTAAARAERGEG 319

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I  G
Sbjct: 320 N------LGFISSASKCLASDVAMEVTTDAVQLFGGAGYTTDFPVERMMRDAKITQIYEG 373

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L +G
Sbjct: 374 TNQIQRVVMSRALLRG 389


>gi|62988280|ref|NP_001017933.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Bos taurus]
 gi|75060971|sp|Q5EAD4|ACDSB_BOVIN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|59857635|gb|AAX08652.1| acyl-Coenzyme A dehydrogenase, short/branched chain precursor [Bos
           taurus]
 gi|113911860|gb|AAI22699.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Bos taurus]
 gi|296472531|gb|DAA14646.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Bos taurus]
          Length = 432

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 135/362 (37%), Gaps = 31/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
            ++++     GL     D  +          +               +    +     M+
Sbjct: 91  KSVIQGLFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLINRMI 150

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + PK+               T  A  + ++E   G+D  A+ ++  K  
Sbjct: 151 GKYGTEEQKATYLPKL--------------ATEKASSICISETGAGSDSFAMKTRADKKG 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  S+ ++  F+++A  +   G   +   L DG   GL   + +NK+G R
Sbjct: 197 DYYIINGSKMWISSAEIAGLFVVMANADFSAGYKGITCFLVDGDTEGLHVGKPENKLGIR 256

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI----- 336
           +++T  + F N         N+        K  I  L+   + ++   + +A+       
Sbjct: 257 ASSTCPVTFENVKVPKT---NILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTI 313

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  + D   ++  +A +A  + AA  L++  A   +  +   +EA+ A+  
Sbjct: 314 PYIKERKQFGRRVFDFQGLQHQVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMAKYH 373

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A  + ++ +E +GG GY +   + +++R++   +I  G+ N  +  +  
Sbjct: 374 A-------SELAGLITSKCIEWMGGVGYTKSYPVEKYFRDAKIGTIYEGTSNIQLNTIAK 426

Query: 457 LL 458
            +
Sbjct: 427 CI 428


>gi|209571446|ref|NP_001129356.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori]
 gi|208609173|dbj|BAG72196.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori]
 gi|209172195|dbj|BAG74561.1| isovaleryl Coenzyme A dehydrogenase [Bombyx mori]
          Length = 416

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 138/379 (36%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK           ++    GL        +     K + H +    L   +   
Sbjct: 56  PKAAEIDKENNFKELRPFWKKLGDLGLLGITASSDYGGTGGKYSDHCVIMEELSRASGGI 115

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 116 ALSYGAHSNLCVNQINRNGTEEQKSKYLPKLCSGEH-------------IGALAMSEPGS 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLED 264
           G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+           +   L +
Sbjct: 163 GSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQHGISAFLIE 221

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F +       LLG  N     +     L  L  A
Sbjct: 222 KDYPGFSTAQKLDKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSGLDLERLVLA 281

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V  M+ ++  A  YA  R   G  + +  +++  +AD+   ++A  +  + +A + D
Sbjct: 282 AGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADMYTTLSACRSYLYNVAKACD 341

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                S++             +C + A  V  +A++ +GG+GYI +    R  R++    
Sbjct: 342 NGHVNSKD-------CAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRILRDAKLYE 394

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L  
Sbjct: 395 IGAGTSEVRRMLIGRALNN 413


>gi|319764486|ref|YP_004128423.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330826702|ref|YP_004390005.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119047|gb|ADV01536.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312074|gb|AEB86489.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 376

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 88/394 (22%), Positives = 150/394 (38%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   RWDK    P       R  H GL       ++   V
Sbjct: 5   QDQEMIRDAVRDFAQDQLW-PNAARWDKEHHFP-------REAHRGLAALG---AYGICV 53

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++        L L   LE         ++A  V       +   +      R++     
Sbjct: 54  PEELGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKRDW----L 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLA 247
            P+ +  +     LTE   G+D +A+ +   K  DG Y ++G K F++S  +    I++A
Sbjct: 110 TPLARGEMLGAFCLTEPHVGSDASALRTTAAKDGDG-YVINGVKQFITSGKNGQVAIVIA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   L      G    RL++K+G  S+ T ++ F         L+G    
Sbjct: 169 VTDKGAGKKGMSAFLVPTDTPGYVVARLEDKLGQHSSDTAQINFDGCRIPAENLIGAEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  SV   R +   A+ YA+ R   G  + +   +   +AD A 
Sbjct: 229 GYKIALGALEGGRIGIAAQSVGMARSAFEFAVQYAKERESFGQPIFNHQAVGFRLADCAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +  A+  D  +   +EAA A       K +  +MA  V + A++ +GG G 
Sbjct: 289 QIEAARQLIWHAASLRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGV 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VNDFPVERIYRDVRVCQIYEGTSDVQKILIQRAL 375


>gi|254455519|ref|ZP_05068948.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082521|gb|EDZ59947.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 587

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 85/449 (18%), Positives = 172/449 (38%), Gaps = 57/449 (12%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
              LA   + N  +L      G     V   P +     + I DG      D  +     
Sbjct: 53  ILPLAVAGDENPAKLE----NGV----VRTPPGYKEAYNKYIEDGWVSLSCDPKYGGQGM 104

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +        +     L        ++ + + +       +   + PK+   ++  T   
Sbjct: 105 PKTVSAFFDEMLSATSLSFKLYSELTIGAYNCILRHAAEDMKDKYLPKMVEGKWSGT--- 161

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + LTE   GTD+  + ++  + SDG Y +SG K F++S   D       +
Sbjct: 162 ----------MCLTEPVCGTDLGMLKTKAVEQSDGTYKISGQKIFITSGDQDLTENIIHL 211

Query: 245 MLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           ++A+          +  FLVP+ + +     G  NG+    +++K+G + +AT  L F  
Sbjct: 212 VIARASDSPPGTKGISLFLVPKFIVNEDGTIGPRNGVSTGSVEHKMGIKGSATCVLNFDE 271

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+++G  N     +  M  L  +   +  +    ++   ++ YA+ R   G       
Sbjct: 272 AVGYMIGPKNKGLSQMFTMMNLERIIVGVQGLGISEIAYQNSLSYAKERKQ-GKTNNSKS 330

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANS------FDEAKSRSEEAAYARIM 396
                 +I+   ++R++ ++   I    AL F L+          + K + E + Y  +M
Sbjct: 331 TNGADFIIEHADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHPDEKIKQEASDYVSLM 390

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDV 454
            P+ K     +A  + ++AM+  GG G+ +++ I + YR++    I  G+ +     L  
Sbjct: 391 TPVVKSLFTDLATEITSDAMQIHGGYGFTKDQGIEQLYRDNRITPIYEGTNSVQAADLVF 450

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             L  K  N+     + ++ +  S  +KV
Sbjct: 451 RKLSNKNGNIIGNFLNMIKMECESKNEKV 479


>gi|330965352|gb|EGH65612.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 387

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 142/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    PA   + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAEISPRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + PK+ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 174 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGAL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  IAD+
Sbjct: 234 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|254822501|ref|ZP_05227502.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 592

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 137/520 (26%), Positives = 231/520 (44%), Gaps = 60/520 (11%)

Query: 32  IGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N YS+D  L   +A +          + L  +GE +    A+  A   + N P+L  
Sbjct: 32  VGLNWYSTDPTLQFTMAYYLRPDELKLAERHLTRIGELMGGPVAR-WAEETDRNPPRLQR 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    +V   P      +R++ D        R+     +  +     A  YL+ Q 
Sbjct: 91  YDRWGHDVSEVVM-PTSFTQSKRAVLDAQRAL---RTEAREAKMSSSLTLFASNYLLNQA 146

Query: 147 EAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           + G   +       +   VA      V +    K  S E+                  LT
Sbjct: 147 DIGMGCALGTGGGMVQSLVAAYAPADVAEHVLAKFASGEWAGE-----------TAQLLT 195

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  FL
Sbjct: 196 ERTGGSDLGALETTATRHGD-SWLLNGFKWFASNCAGEAFVVLAKPEGAPDSSRGVANFL 254

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGP 308
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                G 
Sbjct: 255 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTAESGPADGKGLGR 314

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + ++     L  A+  +   R +L E++ YAR+R   GG LID+P+M+R +A++ +D+ A
Sbjct: 315 MMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAEMIVDVEA 374

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL F    + +  + RS     A    P+TK   C++     ++A+E  GG+GYIE  
Sbjct: 375 AQALVFDGTGATNHRQPRSLRQRIA---VPVTKLKVCRLGITAASDAIEIHGGNGYIETW 431

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +AR  R++  N+I  G  N + LDV   +E+                  + + ++  LR
Sbjct: 432 PVARLLRDAQVNTIWEGPDNILCLDVRRGIEQTR----------------AHETLLARLR 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           D++S+  +D+   R +  +I    +A   +     ++A+ 
Sbjct: 476 DAVSVADDDEA-TRLVAGRIEDLDAAITAWSKLDRELAEA 514


>gi|221638614|ref|YP_002524876.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221159395|gb|ACM00375.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 591

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 101/527 (19%), Positives = 188/527 (35%), Gaps = 71/527 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           S   +E  ++A      L+      G R +   V     +     +    G      D  
Sbjct: 38  SAVLEEAGKLARDVLAPLNRVGDMQGCRLENGVVRTPEGFAEAFAQLKEGGWTALDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +         +     +++ A +        +  + S +    +    + W PK+ S ++
Sbjct: 98  YGGQGLPYVMQTAVGEIFVSANMAFNMYQGLTHGAYSAIHAHGSEEQKRTWLPKMVSCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHAGTDLGMMRTRAEPQEDGSYLVTGEKIFISAGDHDMA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+  G       V  F+VP+ L +     G  N +   ++++K+G   NAT 
Sbjct: 205 ENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--- 344
            L +    G+LLG+L+     +  M     L   +   +    +   A+ YAR R     
Sbjct: 265 VLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNAVAYARDRLQGRS 324

Query: 345 -SGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
            SG          LI  P ++R + D    +  A AL+F  A   D +  + +  A    
Sbjct: 325 LSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLI 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           A +  GG GY+EE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           ++                  +     GK  +   +   S  KE++  AR       L  +
Sbjct: 445 LVG----------------RKLAAEGGKPAMAFFQMIRSFLKENEEDARLKGFLEPLKQA 488

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +    +A M      F          +    L G ++   ++  L L
Sbjct: 489 SKDTQKAAM------FFA---EKGMKNPDEALAGSYDFMTMMGHLCL 526


>gi|27374346|gb|AAO01087.1| Arc42-PA [Drosophila willistoni]
          Length = 405

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 143/377 (37%), Gaps = 32/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
             ++D+   +P     +++    G+                     A          AG 
Sbjct: 50  AAKFDREHLYPE--KEIKQMGELGVMAVAIPEELGGTGLDYLAYAIAMEEISRGCASAGV 107

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +MS + +      L    P   + +     + E                   L+E   G+
Sbjct: 108 IMSVNNSLYLGPLLSFGNPAQKEKYITPFTAGE-------------RVGCFALSEPGNGS 154

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A ++      D         W  +   ++A I+ A    ++    +   +      G
Sbjct: 155 DAGAASTIATDKGDRWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGISAFIVPKGIKG 214

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G R ++T +L F +     +   N+   P    KI +  LD+  + ++G 
Sbjct: 215 FSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFKIAMQTLDAGRIGIAGQ 271

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +A+     A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D  
Sbjct: 272 ALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALESARLLTWRAAWLKDNK 331

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +S ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I 
Sbjct: 332 QSYTKEAAMAKLAASEAATLCS-------HQCIQVLGGMGYVTDMAAERHYRDARITEIY 384

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   + K
Sbjct: 385 EGTSEIQRLVIAGSILK 401


>gi|297819030|ref|XP_002877398.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323236|gb|EFH53657.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 136/378 (35%), Gaps = 24/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  ER DK    P    L ++     LH     +      +    H I    +   +   
Sbjct: 52  PHAERIDKTNSFPKDVNLWKQMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSV 111

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 112 ALSYGAHSNLCINQLVRNGTAAQKQKYLPKLISGEH-------------VGALAMSEPNA 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +K+  G        W  + P ++  ++ A+ + + G   +   + +   
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N F                +     L  L  +   
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENIIDKEGKGVYVLMSGLDLERLVLSAGP 278

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K
Sbjct: 279 LGIMQACLDTVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGK 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++          T     + A  V  +A++C+GG+GYI E +  R  R++    I  
Sbjct: 339 VDPKD-------CAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGA 391

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+     + +   L K  
Sbjct: 392 GTSEIRRIVIGRELFKEQ 409


>gi|167768406|ref|ZP_02440459.1| hypothetical protein CLOSS21_02963 [Clostridium sp. SS2/1]
 gi|317499239|ref|ZP_07957513.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167709930|gb|EDS20509.1| hypothetical protein CLOSS21_02963 [Clostridium sp. SS2/1]
 gi|291560376|emb|CBL39176.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SSC/2]
 gi|316893490|gb|EFV15698.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 378

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 133/403 (33%), Gaps = 40/403 (9%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  A++L +       N    Q  AY   GE          W   +  ++I   LH
Sbjct: 2   AYLISEEAKDLLQDVHEFCENEVKEQCKAYDVSGE----------WPKEIYDKAIEMQLH 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +      +           +A       +S S      V +       K    
Sbjct: 52  SLEVPEEYGGPGLSRVDVAALIEEMAIADAGFATTISASGLGTKPVLIAGNEEQKKHVCQ 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           KI    +                  LTE   G+D +A T+   K  D         +  +
Sbjct: 112 KIIDGGF--------------GAFCLTEPGAGSDASAGTTTAVKDGDEWVLNGRKCFITN 157

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++  + + A  +   G   +   L D    GL     +NK+G R++ T ++   +   
Sbjct: 158 GGIASFYCITAMTDKTKGVKGISMFLVDAGTPGLSTGNEENKMGIRTSNTCDVVLEDCRI 217

Query: 297 FLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                +     G    MK L         ++    +  + E I YA+ R   G  +I   
Sbjct: 218 PAANLVGEEGRGFSIAMKTLDQARAWMGCVATGIAQRGINEGIAYAKERVQFGKPVIKNQ 277

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            M+  +AD+ +    A  +        D     S+EAA       I K +   +A  V +
Sbjct: 278 AMQFKVADMEIKTETARQMVAHALTKMDMGLPHSKEAA-------IAKCYASDIAMEVAS 330

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           EA++  GG GY  E  + +  R++    I  GS     + V N
Sbjct: 331 EAIQMFGGYGYSREYPVEKLLRDAKIFQIFEGSNEIQRIVVAN 373


>gi|144898578|emb|CAM75442.1| Butyryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 380

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 145/398 (36%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q L R       +     PG ER D+    PA  A L      G    +    ++   
Sbjct: 5   EEQSLIRDTARAFAR-ERLAPGAERRDREHAFPA--AELAEMGELGFMGMVVPTEYDGAG 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A       +     +MS   +   M  L   T      +             
Sbjct: 62  TDYVSYALALMEIAAGEGATSTIMSVHNSVGCMPILKFGTEAQKDTYL------------ 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIML 246
             PM +        LTE   G+D  +I ++  +  D  Y L+G K F++S  +    I+ 
Sbjct: 110 -RPMARGEWIGCFCLTEPEAGSDAGSIKTRAVRDGD-FYVLNGTKQFITSGRNAKVAIVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    R+++K+G  ++ T ++   +     +   N   
Sbjct: 168 AVTDPSAGKKGLSAFIVPTDSPGWVVARVEDKLGQHASDTCQIILED---LRIPAENRLG 224

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       L  A  SV     +L  A+ YA+ R   G  +I+   +   +A
Sbjct: 225 AEGEGLKIALANLEGGRLGIAAQSVGMASAALDHALRYAQERKQFGKAIIEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L   +A   D      +EA+ A+++A        + A  V ++A++  G
Sbjct: 285 DMATRLEAARHLVLHVATLRDAGLPCLKEASMAKLLA-------SETAEKVCSDAIQIHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 338 GYGYLADFPVERIYRDVRVCQIYEGTSDIQRLVIARAL 375


>gi|152975579|ref|YP_001375096.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152024331|gb|ABS22101.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 381

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 136/373 (36%), Gaps = 35/373 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK    P  +   ++    GL    +   +        ++ +    +            +
Sbjct: 32  DKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTLSYVLAVEEIGRACGGTGLSYAA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                AS +    T    + +               PM         GLTE   G+D   
Sbjct: 90  TISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAGG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLC 271
             ++     D  Y ++G K ++++      I++  V G    G   +   +      GL 
Sbjct: 137 TQTKAILDGDE-YVINGEKCWITNAEYANTIIVTAVNGVDENGRKRISAFIVPTISEGLT 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRV 330
                +K+G R++ T E+   +         N+     +  K  +Y LD   +S++ + V
Sbjct: 196 ISSPYDKMGVRASNTCEIVLEDVRVP---RENILGDVNKGFKQFLYTLDGGRISIAALAV 252

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A+     A+ YA+ R   G  + +   ++  +AD+A +I  A  L  + A   D  K 
Sbjct: 253 GIAQSAFERALQYAKERKQFGKAISNFQAIQFKLADMATEIELARNLVHKAAWLKDHDKP 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G
Sbjct: 313 FGKEAAMA-------KLFASEAASRISNQAVQIHGGYGYMREYEVERHIRDAKLLEIGEG 365

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 366 TSEVQRLVIARHL 378


>gi|302652212|ref|XP_003017962.1| thermophilic desulfurizing enzyme family protein [Trichophyton
           verrucosum HKI 0517]
 gi|291181555|gb|EFE37317.1| thermophilic desulfurizing enzyme family protein [Trichophyton
           verrucosum HKI 0517]
          Length = 431

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 141/390 (36%), Gaps = 24/390 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R D+    P    + ++    G      +  +  +    QAH
Sbjct: 59  EFAKREIPE-----EVAARTDEQNQFP--PEMWKKFGEAGFLGVTAEEKYGGLGMGYQAH 111

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L   +        + S    + + L  +P   + + P + S E           
Sbjct: 112 CVVMEELSRASGSIGLSYAAHSQLCVNQLCLNGSPEQKERFLPGLISGE----------- 160

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++ ++ + +  G        W  + P +D  ++ A+ E   
Sbjct: 161 --KIGALAMSEHSAGSDVVSMKTKAKAVDGGFVLNGTKMWITNGPDADFIVVYAKTEPDA 218

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G   +   + + +  G    R  +K+G R + T EL F +       +LG LN     + 
Sbjct: 219 GSKGITAFVVEKNFKGFSCARKLDKLGMRGSNTGELIFEDVFVPHANVLGQLNKGVRVLM 278

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+  L   + Y   R   G  +    +++  +AD+   +AA+ 
Sbjct: 279 EGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGMPIAHNQLIQGKLADMYTKLAASR 338

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++  A   D++   S+ A            +  + A     +A++ +GG+GYI E   
Sbjct: 339 AFTYNTARQVDQSAVSSDGAQVKTQDCAGAILYAAERATECSLDAIQLMGGNGYINEIPA 398

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++    I  G+     + +     K
Sbjct: 399 GRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 428


>gi|192290201|ref|YP_001990806.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283950|gb|ACF00331.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 390

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 144/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  E  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRETVRDFAANEIAPRAEAIDKTNTFP--RDLWPKLGALGLHGITVEEDYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         + + PK+ S E+  
Sbjct: 70  AGLGYLEHCIAMEEISRASASVGLSYGAHSNLCINQIRRNGNEAQKQKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRFVLNGNKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPNAGPRGITAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   V  M+  +   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGETTREDAAGA-------ILYAAERATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|15964628|ref|NP_384981.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307304205|ref|ZP_07583957.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15073806|emb|CAC45447.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306902673|gb|EFN33266.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 593

 Score =  283 bits (724), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 103/514 (20%), Positives = 198/514 (38%), Gaps = 69/514 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LGE ++     E  R A+     L       G R     V+    W  L R  I  G +
Sbjct: 30  ELGEDLVDAILGEAGRFASEEVAPLGDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                 +F        H +  A + +         ++P++T  ++ AL    T  +   +
Sbjct: 90  GLTAPEAFGGQNLP--HMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKATF 147

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K F
Sbjct: 148 LPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQKIF 194

Query: 235 LSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           ++    D       ++LA++         +  FLVP+ L +     G  N +    L++K
Sbjct: 195 ITWGEHDFTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGERNDVFCHSLEHK 254

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G   + T  + + +          G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTMMNNARLAVGMQGVAIAEA 314

Query: 331 SLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA+ R               +I+ P + R +  +      + A+++  A++ D
Sbjct: 315 ATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIAYACAHAVD 374

Query: 382 EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A +   E A      + ++ PI K +       V +  ++  GG G+IEE   AR+ R+
Sbjct: 375 MAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEETGAARYLRD 434

Query: 437 SPANSILLGSGNAMVLDVLNL---LEKGTNL--FEQLFSTLEQDLGSSGK----KVITIL 487
           +    I  G+     +D++     L  G  +  F      +   + +S +    +    L
Sbjct: 435 ARIAPIYEGTNGIQAIDLVTRKLPLSDGAQVRGFIAELREVAAAVAASNREGFGETAARL 494

Query: 488 RDSISLCK--EDKGLARFLTEKIALASSAAALYR 519
             +++  +   D  L+R    K+A A + A  Y+
Sbjct: 495 DAAVADLEGATDWLLSRLRDGKLAEALAGATAYQ 528


>gi|301061918|ref|ZP_07202648.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444022|gb|EFK08057.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 381

 Score =  283 bits (724), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 141/396 (35%), Gaps = 37/396 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
            AR A+          P     D+   HPA   ++++     +        +        
Sbjct: 16  AARFADAE------IRPKAAELDETHAHPA--DIVKQLGELKMLGIAVPEEYGGGGMDYV 67

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPM 191
             + A           G +MS + +          T    K +     S EY        
Sbjct: 68  SYVLALIEISKGCASTGVIMSVNNSLYCFPVYAYGTEDQKKKYLHPCASGEY-------- 119

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GLTE   G+D A + +   + +         K+  +  ++   ++ A  + 
Sbjct: 120 -----LGCYGLTEAGAGSDPAGMRTIAVRDNAEWIISGEKKFITNGNVARFAVIAAVTDK 174

Query: 252 RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             G   +   + D  +  G    R++ K+G  ++ T EL F +        L       +
Sbjct: 175 EKGYKGISSFVVDLENTPGFKVGRVEEKMGILASGTAELIFEDARVPADALLGKEGEGFK 234

Query: 311 DMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            M  L  L+   + ++   +      L +A+ YA+ R   G  +     ++  +AD+A +
Sbjct: 235 QM--LTTLNGGRIGIASQAIGIGRSVLEDAVSYAKTREQFGKPITSFQAIQWKLADMATE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L+ R A   D  K   +EAA A++       +    A     E ++ +GG GY 
Sbjct: 293 LDAAELLTLRAAWLEDHKKPYEKEAAMAKM-------YASDAAMRASVEGVQILGGYGYS 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +E  + RH R++    I  G+   M L V   L KG
Sbjct: 346 KEYPMERHMRDAKICQIYEGTNEIMRLVVAKNLTKG 381


>gi|315225079|ref|ZP_07866896.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287]
 gi|314944762|gb|EFS96794.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287]
          Length = 381

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 153/397 (38%), Gaps = 29/397 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q +   A     +     P    WD+ +  P    + R++   G    +   ++    
Sbjct: 7   ETQRMVADAAKEFAE-KYIRPHVMEWDESQEFPV--EVFRKAGELGFMGVLVPEAYGGSG 63

Query: 129 RKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                +      +  +       + + +    + +      +  + W PK+ S E+    
Sbjct: 64  LDYHDYIAIVEEISKVDPSIGLSIAAHNSLCTNHILSFGNEQQKQRWLPKLASGEW---- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
                        G+TE   G+D   + +   K  D  + L+G K F++   +    +++
Sbjct: 120 ---------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTKNFITHGKTGQIAVVI 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+   +     +   + +    G    + +NK+G R++ T E+ F +        L  V 
Sbjct: 170 ARTGEKGNKHAITAFVVERGTKGFSSGKKENKLGMRASETAEMIFQDCRIPDANRLGEVG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G ++ MKIL    +    +S+   + +   ++ YA+ R   G  LID   +   +AD+A
Sbjct: 230 DGFIQAMKILDGGRISIGALSLGIAKGAYEASLKYAKERMQFGKRLIDLQAVGFKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I A+  L  + A   +  +  +   A A++       +  ++   V  EA++  GG G
Sbjct: 290 TEIEASELLLHKSAFQKNNGQRVTLSGAMAKM-------YASEVCVRVATEAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y ++  + + +R+S   +I  G+     L +   ++K
Sbjct: 343 YTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQIDK 379


>gi|195450120|ref|XP_002072373.1| Arc42 [Drosophila willistoni]
 gi|194168458|gb|EDW83359.1| Arc42 [Drosophila willistoni]
          Length = 405

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 143/377 (37%), Gaps = 32/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
             ++D+   +P     +++    G+                     A          AG 
Sbjct: 50  AAKFDREHLYPE--KEIKQMGELGVMAVAIPEELGGTGLDYLAYAIAMEEISRGCASAGV 107

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +MS + +      L    P   + +     + E                   L+E   G+
Sbjct: 108 IMSVNNSLYLGPLLSFGNPAQKEKYITPFTAGE-------------RVGCFALSEPGNGS 154

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A ++      D         W  +   ++A I+ A    ++    +   +      G
Sbjct: 155 DAGAASTIATDKGDRWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGISAFIVPKGIKG 214

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               + ++K+G R ++T +L F +     +   N+   P    KI +  LD+  + ++G 
Sbjct: 215 FSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFKIAMQTLDAGRIGIAGQ 271

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +A+     A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D  
Sbjct: 272 ALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALESARLLTWRAAWLKDNK 331

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +S ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I 
Sbjct: 332 QSYTKEAAMAKLAASEAATLCS-------HQCIQVLGGMGYVTDMAAERHYRDARITEIY 384

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   + K
Sbjct: 385 EGTSEIQRLVIAGSILK 401


>gi|257487840|ref|ZP_05641881.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331008551|gb|EGH88607.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 387

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ + +     +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F N        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDNVEVPEENLLGVLDGGVIVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|89891840|ref|ZP_01203342.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89515995|gb|EAS18660.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 380

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 130/371 (35%), Gaps = 26/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           DK +  P    L+ +    G    + D  +        ++ +    L  +    +  +  
Sbjct: 32  DKEQNFP--KELITKMGDLGFLGMMVDPKYGGGGMDTTSYVLVMEELSKIDASASVIVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +         + +  K+ + E                   L+E   G+D  +
Sbjct: 90  NNSLVCYGLEAYANETQKEKYLTKLATGE-------------SIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +    + D         W  +   +D +I++AQ +   G   +   + + + +G    
Sbjct: 137 QRTTAIDMGDHYLLNGTKNWITNGNSADYYIVIAQTDKEKGHKGINAFIVEKTWDGFEVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             ++K+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKEDKLGIRGSDTHSLNFNDVKVPKENRIGEDGFGFKFAMKTLAGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A  Y+++R   G  + +   +   +AD+ ++I A+  L    A   D+    +   
Sbjct: 257 AFELAKDYSKQRKAFGTEICNHQAIAFKLADMKVNIDASRHLIMHAAWMKDQGMDYNVAG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  + A     EA++  GG+GY++E  + R  R++    I  G+    
Sbjct: 317 CTA-------KLFASQTAMDTTVEAVQVHGGNGYVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEKG 461
            + +   L KG
Sbjct: 370 KIVISRDLLKG 380


>gi|317419510|emb|CBN81547.1| 'Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial ' [Dicentrarchus labrax]
          Length = 432

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 132/360 (36%), Gaps = 25/360 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +++     GL     D  +          I               L     T  + + +
Sbjct: 90  DVIKSLFEQGLMGIEIDPEYGGTGSTFFSSILVIEELAKVDPSVAVLCDIQNTLINTLFV 149

Query: 165 M-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   + +  ++               T +     L+E   G+D  A+ ++ +K  D
Sbjct: 150 KLGTPAQKEQYLSRL--------------STDMIGSFCLSEAEAGSDAFALKTRAEKHKD 195

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++  +  F+++A V+   G   +   + D    GL   + +NK+G R+
Sbjct: 196 YYIINGSKMWISNAEHAGVFLVMANVDPSAGYRGITCFIVDQDTEGLEICKKENKLGLRA 255

Query: 284 NATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T  L F N        L            M     +  A   +   +      I Y R
Sbjct: 256 SSTCPLNFDNVKVPEKNILGQIGHGYKYAIGMLNEGRIGIAAQMLGLAQGCFDNTIPYTR 315

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + D   M+  IA +A  I AA  L++  A   +  +   +EA  A       
Sbjct: 316 QRVQFGKRIFDFQGMQHQIAHVATQIEAARLLTYNAARLKEAGRPFIKEACMA------- 368

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           KY+C ++A    ++ +E +GG G+ ++  I ++YR+    +I  G+ N  +  +   ++K
Sbjct: 369 KYFCAELATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTTNVQLSTMAKFIDK 428


>gi|326498703|dbj|BAK02337.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 132/380 (34%), Gaps = 24/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P     D     P    L +      LH       +  +      H I    +   
Sbjct: 75  EHIAPHAAAIDASNHLPKEVNLWKLMGDFNLHGLTSPEEYGGLGLGYMYHCIAMEEISRA 134

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +P   + + PK+ S ++                L ++
Sbjct: 135 SGSVGLSYGAHSNLCINQLVRHGSPTQKEKYLPKLISGDH-------------IGALAMS 181

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K+  G        W  + P +   ++ A+ +   G   +   + 
Sbjct: 182 EPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDITAGSKGITAFII 241

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDS 320
           +    G    +  +K+G R + T EL F N F      L      V  M     L  L  
Sbjct: 242 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVL 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   
Sbjct: 302 AGGPIGLMQACLDVVLPYVRQREQFGRPIGEFQFLQGKMADMYTSLQSSRSFVYSVARDC 361

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K   ++             +  + A  V  EA++C+GG+GYI E    R  R++   
Sbjct: 362 DNGKVDRKD-------CAGVILFAAERATQVALEAIQCLGGNGYINEYPTGRLLRDAKLF 414

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 415 EIGAGTSEIRRMIIGRELFK 434


>gi|72162048|ref|YP_289705.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915780|gb|AAZ55682.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 385

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 135/393 (34%), Gaps = 26/393 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E  R A  +  +     P     D+    P              H       +  V    
Sbjct: 14  EALREAIRSVAE-DKIAPHAADVDEQSRFP--QEAYEALRASDFHAPHVAEEYGGVGADA 70

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                           +  + + +   +  + L  +  V + + P++ S E         
Sbjct: 71  LATCIVIEEIARVCASSSLIPAVNKLGSMPLILSGSDEVKQRYLPELASGE--------- 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GL+E+  G+D A++ ++  +  D         W  ++ +S  + ++A  + 
Sbjct: 122 ----AMFSYGLSEREAGSDTASMRTRAVRDGDDWILNGQKSWITNAGISKYYTVMAVTDP 177

Query: 252 R-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
                  +   +      G  +   + K+G + + T EL F N       L+G +     
Sbjct: 178 DGPRGRNISAFVVHIDDPGFSFGEPERKLGIKGSPTRELIFDNVRIPGDRLVGKVGEGLR 237

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     +     +V   + +L  A+ Y + R   G  + D   ++  +AD+A+ + 
Sbjct: 238 TALRTLDHTRVTIGAQAVGIAQGALDYALGYVKERKQFGKAIADFQGIQFMLADMAMKLE 297

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + +  A     AKS  ++A  +   A   K +   +A  +  +A++ +GG GY  +
Sbjct: 298 AARQMVYVAA-----AKSERDDADLSFYGAA-AKCFASDVAMEITTDAVQLLGGYGYTRD 351

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R  R++    I  G+     + +   L K
Sbjct: 352 YPVERMMRDAKITQIYEGTNQIQRVVMARQLLK 384


>gi|295135761|ref|YP_003586437.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294983776|gb|ADF54241.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 380

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 128/373 (34%), Gaps = 27/373 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER +K EF  A    +      G+  S     +          I A          A  +
Sbjct: 30  ERDEKQEFPKAQVKKMGELGFLGMMASP---EYGGGGMDTISYILAMEEISKIDASASVI 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           MS  +      +         + +  K+ + E                   L+E   G+D
Sbjct: 87  MSVNNSLVCWGLDTYGNTDQKEKYLSKLTTGE-------------KLGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +      D         W  +   +D ++++AQ +       +   + +    G 
Sbjct: 134 ATSQRTTAIDKGDYYLLNGTKNWITNGGTADYYLVIAQTDREKKHNGINAFIVEKGWEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                +NK+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 194 EVGPKENKLGIRGSDTHSLNFNDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A  Y+++R   G  + +   +   +AD+   I ++  L  + A   D+ ++  
Sbjct: 254 ASGAFELARDYSKQRKAFGTEISNHQAIAFKLADMYTAIESSRHLVMKAAWDKDQKQNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A++ A  T       A  V  EA++  GG+G+++E  + R  R++    I  G+ 
Sbjct: 314 LSGAMAKLSASQT-------AMDVTIEAVQIHGGNGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   + K
Sbjct: 367 EIQKIVISRSILK 379


>gi|193076005|gb|ABO10592.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 375

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KDTLAQMGQLGFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAAIKTRAVKDGD-YYILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|117920429|ref|YP_869621.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612761|gb|ABK48215.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 585

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 101/537 (18%), Positives = 201/537 (37%), Gaps = 58/537 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLADMRFLLEQVFDAPNTW-AQLPDIAEMVDMDTASAILEEAAKISAELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      +  F  +   +   +    +  
Sbjct: 60  RAGDEQGVLHQDNRVITPDGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGC 255
           TE + G+D+  I ++     DG Y +SG K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP+   +     G  NG+    +++K+G + +AT  + F    G+L+G+ N     + 
Sbjct: 227 FLVPKTTVNADGSLGQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D     E + +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTL 472
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL   ++  + L
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAEL 466

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           +  +    +     +    +       +A  + E+    +  A +  + ++ + D F
Sbjct: 467 KAQMREFTQVDAVKVSAVCARLDALVNVAESINEQ--KLTQPALINASAVDFL-DAF 520


>gi|254386287|ref|ZP_05001596.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345141|gb|EDX26107.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 84/423 (19%), Positives = 144/423 (34%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           +D     +    P+   ++L  L   +     +                    E  D   
Sbjct: 2   TDRAPQPVDRQLPTEESRDLLALVREIAQREIRP----------------RAAEEEDSGR 45

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           F      LL      GL    +D SF    +     ++       A+L  G  +S    +
Sbjct: 46  FPREVFTLLS---EAGLLGLPYDGSFGGGEQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   +        P +                 +     L+E   G+D A++T++ 
Sbjct: 103 CHGLAGYGSKEQQSAHLPAMLGG-------------GLLGAYCLSEPAAGSDAASLTTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D + +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGDEWVITGTKAWITHGGVADFYTVLART-GAPGPKGITAFLVPGDVEGLTAAVPEKK 208

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  +V   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRVPDSRRIGEEGQGFTIALAALDAGRLGIAACAVGVAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D  K  S +AA A  
Sbjct: 269 VTYALDRKQFGHPIADFQGLRFMLADMATKIEAGRALYLAAARLRDAGKPFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A AV  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDAAMAVTTDAVQILGGYGYTADFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|26988940|ref|NP_744365.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24983754|gb|AAN67829.1|AE016414_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 375

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 132/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK    P     +      GL   +    +            A           
Sbjct: 24  PFAEQWDKDHRFP--KEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L     +  + +               P+   ++     LTE + 
Sbjct: 82  STIMSVHNSVGCVPILRFGNEQQKEQFL-------------TPLATGAMLGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F N    +   L     G    +  L    +  A  +
Sbjct: 189 PGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIGIASQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  LI+   +   +AD+A  I+ A  +    A   D  +
Sbjct: 249 VGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAALRDAGR 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V ++A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDIQRMVIARNL 375


>gi|256027536|ref|ZP_05441370.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           D11]
 gi|260495248|ref|ZP_05815376.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289765495|ref|ZP_06524873.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
 gi|260197305|gb|EEW94824.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|289717050|gb|EFD81062.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11]
          Length = 378

 Score =  282 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 137/404 (33%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L +       N    Q   Y   GE          W   +  ++I  G  
Sbjct: 2   AYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGE----------WPKEIYDKAIEQGYQ 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +     K+           +A       +S S  +   V +       +    
Sbjct: 52  ALEVPEKYGGPGLKRVDIAALIEEMAIADAGFATTISASGLAMKPVFISGNEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            + +                     LTE   G+D +A  +   K  +  Y L+G K F++
Sbjct: 112 LVLAGG--------------LGAFCLTEPGAGSDASAGRTTAVKDGNE-YVLNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +     +    GL     ++K+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAITDKEKGLKGISMFFVEKGTKGLSTGNHEDKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++V   +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARSWIGCIAVGIAQRGIQEAIAYGKERIQFGKPIIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D      +E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPYGKESA-------IAKCYAGDIAMQVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R+S    I  G+     + + N
Sbjct: 330 SEAIQMFGGYGYSREYPVEKLLRDSKIFQIFEGTNEIQRIVIAN 373


>gi|239787384|emb|CAX83860.1| Isovaleryl-CoA dehydrogenase [uncultured bacterium]
          Length = 390

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 138/382 (36%), Gaps = 26/382 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    P    L +     G+H    + ++        AH +    +   +
Sbjct: 31  RIAPLAAEIDRSNEFPMH--LWKELGDLGVHGITVEEAYGGAGMSYLAHVVAMEEISRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         + + PK+ S E+                L ++E
Sbjct: 89  ASVGLSYGAHSNLCINQIRRNGNEAQKRKYLPKLISGEH-------------VGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  + P +D  ++ A+ +   G   +   L +
Sbjct: 136 PGAGSDVVSMRLKAEKKGDRYILNGTKFWITNGPDADVLVVYAKTDPAAGSKGITTFLVE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        LN     V  +   +  + A+++
Sbjct: 196 KGFKGFSVAQKLDKLGMRGSNTGELVFQDCEVPEENVLNAIGKGVNVLMSGLDYERAVLA 255

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  +   + Y   R   G  +    +M+  +AD+   + A  A  + +A + D
Sbjct: 256 GGPLGIMQACMDVVVPYVHERKQFGEPIGHFQLMQGKLADMYTTLNACKAYVYAVARACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  + A  +  EA++ +GG+GYI +    R  R++    
Sbjct: 316 LGETTRKDAAGA-------ILYSAEKATWMALEAIQTLGGNGYINDYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 369 IGAGTSEIRRMLIGRELFNETA 390


>gi|258570827|ref|XP_002544217.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237904487|gb|EEP78888.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 430

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 132/360 (36%), Gaps = 17/360 (4%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + ++    G      D  +  +    QAH I    +   +   A    + S    + ++
Sbjct: 81  EMWQKLGEAGFLGVTADEQYGGLSMGYQAHCIVLEEMSRASGSIALSYAAHSQLCVNQLS 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P + S E                 L ++E   G+D+ ++ +  + +  
Sbjct: 141 LNGTPEQKAKYLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKAVDG 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  + P +D  ++ A+ E   G   +   + + +  G    R  +K+G R 
Sbjct: 188 GYILNGTKMWITNGPDADYIVVYAKTEPTGGSKGITAFIVETTSKGFSCARKLDKLGMRG 247

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F + F     +LG +N     + +   L  L  +   +  M+ +L   + Y  
Sbjct: 248 SNTGELIFEDLFVPKENVLGTVNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTH 307

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   +AA+ A ++  A   D +    E            
Sbjct: 308 TRKQFNTPIAHNQLVQGKLADMYTKLAASRAYTYNTARQIDNSADSPEGPQIRTQDCAGA 367

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 368 ILYAAERATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 427


>gi|154253338|ref|YP_001414162.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157288|gb|ABS64505.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 379

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 82/402 (20%), Positives = 148/402 (36%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
            + L+   Q    +A N+ T +L  +      WD+  F P   A +R++   G       
Sbjct: 2   RFDLTEEQQAFQDVARNFATDELAPH---AADWDRDAFFPV--ATMRKAAALGFAGIYVR 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                    +                    MS    ++ M+         + W P++   
Sbjct: 57  EDVGGSALTRLDAALIFEALSEGCTSTAAFMSIHNMASWMIDRFGNEEQRQKWLPRLT-- 114

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                   PM    +     LTE   G+D AA+ ++  +  D  Y L+G K F+S   + 
Sbjct: 115 --------PM---DLIASYCLTEPSSGSDAAALKTKAVRDGDH-YVLNGSKAFISGAGTS 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
              +     G  G   V  ++ +    G+ +   + K+G  S  T ++ F +    +   
Sbjct: 163 DLYVCMVRTGEAGAKGVSCIVVEKDTPGVSFGAPERKMGWNSQPTAQVIFEDARVPVANR 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +     G    M  L    L+    S+   R +L  A  Y   R   G  L     ++  
Sbjct: 223 IGEEGEGFKIAMMGLDGGRLNIGACSLGTARAALKRAKDYLGEREQFGKKLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +  + A   D           A + A + K +   +   VI EA++ 
Sbjct: 283 LADMATELEAARLMIMQAATKVDAKAPD------ATMHAAMAKRFATDVGFNVINEALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY+++  + RH R++  + IL G+   M + +   L K
Sbjct: 337 HGGYGYLKDFPLERHLRDARVHQILEGTNEIMRVIIARELLK 378


>gi|308173826|ref|YP_003920531.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606690|emb|CBI43061.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553248|gb|AEB23740.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens TA208]
 gi|328911967|gb|AEB63563.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus
           amyloliquefaciens LL3]
          Length = 380

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 134/379 (35%), Gaps = 31/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA     ++    GL    +   +        ++ I    +       
Sbjct: 26  PKAHEVDQSAVFPA--DTFKKIGELGLLGIPFPEEYGGAGGDTISYAIAVEEIGKACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T +  ++    + S                    GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEQQKQEHLTPLASG-------------KALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D     ++ +K  D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAEKKGDDYVINGEKCWITNANYARTVIVTAVTGKNSAGKPIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G       +K+G R + T EL   +        L       +    L  LD   +S++
Sbjct: 191 TPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGDPEKGFKQF--LYTLDGGRISIA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  A  +  + A   D
Sbjct: 249 ALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    ++EAA+A       K +  +MA     +A++  GGSGY++E  + R  R++    
Sbjct: 309 QNLPFTKEAAFA-------KLYASEMAVRTCLQAIQIHGGSGYMKEYGVERMLRDAKLME 361

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 362 IGEGTSEIQRMVIARQLLK 380


>gi|229173199|ref|ZP_04300748.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228610283|gb|EEK67556.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 381

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYLI-------------PMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEDNGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|262195083|ref|YP_003266292.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262078430|gb|ACY14399.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 557

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 125/532 (23%), Positives = 211/532 (39%), Gaps = 50/532 (9%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARM 76
           +    QPP     N Y  D  L   +A        + V  EL  LGE       +     
Sbjct: 1   MAFFQQPPALG--NQYDDDFFLQDYLARTLPAEVLAAVEDELRELGELSGGHFYRMQLAD 58

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A  N P    +   G+R D++E  P W      +   GL  + +D       R      +
Sbjct: 59  A-RNEPVHVPWDAWGQRVDRIEVSPLWREAQALAAERGLVAAAYDSPHGRFAR----VHQ 113

Query: 137 AARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            A  Y++A     +      +  +A  +       + +    ++ SR+            
Sbjct: 114 FALNYVIAPSLDVYSCPLAMTDGAARTLLSSGNQALIEHAVTRLTSRD---------PAQ 164

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--- 251
           +   G  +TE+ GG+D+    ++ ++  D  + L G KWF S+  S   + L + +G   
Sbjct: 165 AWTSGQWMTERTGGSDVGLSETEARRDGD-TWRLWGTKWFTSATTSQMALTLGRPDGNGP 223

Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTG 307
               +  F V    +DG    +   RLK+K+G R   T EL  + T   L+ +  +    
Sbjct: 224 GGRGLALFYVELRDDDGRLRNIEVNRLKDKLGTRKVPTAELTLAGTPATLVTEEAHNGVR 283

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M  +    +AI++ S MR  LA A  YA+RR   G  L ++P+    +AD+  + A
Sbjct: 284 SITPMLNITRTWNAIIATSLMRRGLALAKDYAQRRRAFGARLAEKPLHLDTLADMQAETA 343

Query: 368 AATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            A  L+FR A      +  ++   +AA AR++ PI K    K A  V +EA+E  GG+GY
Sbjct: 344 GAVLLAFRAAELLGSLESGEATDSDAALARVLTPIAKLSTGKQAVTVTSEALESFGGAGY 403

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS------ 478
           +E+  + R   ++    I  G+ N + LD L  L +  + F  L    E+ LG       
Sbjct: 404 VEDTGLPRLLADAQVLPIWEGTTNVLSLDTLRALGQE-DGFRALQGECERLLGQVQAAEL 462

Query: 479 --SGKKVITILRDSISLCKED-------KGLARFLTEKIALASSAAALYRAG 521
             S +     L  + +   +        +  AR     +  +   A L +  
Sbjct: 463 ATSARAARDALTHAATWLGQQRGERVLIEAGARRFALTLGRSLELALLCQHA 514


>gi|299771990|ref|YP_003734016.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298702078|gb|ADI92643.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 375

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 128/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KDTLAQMGQLGFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  K  D        ++  S   +   I+ A  +   G   +   L      
Sbjct: 130 SDAAALKTRAVKDGDDYILNGAKQFITSGDNAGVIIVFAVTDPSAGKKGISAFLVPRETP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R++ K+G  ++ T ++  ++       +LG                 +  A  +V
Sbjct: 190 GYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQAV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  + 
Sbjct: 250 GLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  G
Sbjct: 310 CLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   L
Sbjct: 363 TSDIQRLVIARSL 375


>gi|153004998|ref|YP_001379323.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028571|gb|ABS26339.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 380

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 130/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD     P     +R+    GL        +            A           
Sbjct: 26  PNARRWDADHVFP--REAVRQLAEMGLMGVAIPPEWGGAGMDNVAYAIAMEEISAGCAGT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   T    K++               P  K        LTE   
Sbjct: 84  GVIMSVNNSLYCDPLLKYGTDAQKKEFL-------------VPFAKGERLGCFALTEPMS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +   +  D         +  + P +D  ++ A  +       +   L     
Sbjct: 131 GSDAAEMRTVAARRGDEYVLDGSKNFITNGPQADVLLVFAMTDKAKKHKGISAFLVPSDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G    +   K+G R++ +  + F          L     G    M  L    +  A  +
Sbjct: 191 KGFTRGKPDEKVGIRASGSCSVFFEGCAIPARFRLGEEGDGFKIAMATLDGGRIGVAGQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +  EA  YA+ R   G ++     ++  +AD+A +I AA  L +R A   D   
Sbjct: 251 LGIARAAFDEARAYAKERKAFGQVISSFQAIQFMLADMATEIDAARLLVWRAATLKDRGV 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S E+A A       K +  +M+  V ++A++  GG GY++E  + RH+R+S    I  
Sbjct: 311 RHSAESAMA-------KLYASEMSERVTSKAIQIHGGYGYVKEYDVERHWRDSRITEIYE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + K
Sbjct: 364 GTSEIQRIVISAAVLK 379


>gi|328709833|ref|XP_001947176.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 422

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P           L+E   G+D  A+ +  +K  D  Y      W  +S 
Sbjct: 141 IGNKEQKEKYLPRLAQDTVSSFCLSEPSSGSDAFALKTTAKKDGDHYYINGTKMWISNSD 200

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F + A  +   G   V   + +    G    + ++K+G R++ T  L F N     
Sbjct: 201 IAGIFYVFANTDPSKGHKGVTCFIVEREQEGFSVAKKEDKLGMRASGTCVLHFDNVKVHK 260

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQ 352
               N+     E  KI I +L+   + +    V +A+        Y   R   G  + D 
Sbjct: 261 D---NIVGKIGEGYKIAITFLNEGRIGIGAQMVGIAQGCLDHTIPYTLERKQFGSSIFDF 317

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA    ++  A  + +  A   D      +EAA A       KY+  ++A  V 
Sbjct: 318 QSMQHQIARAVTEVETARLIVYNTARLVDAGLPFIKEAAMA-------KYYASEVAGKVT 370

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++ +GG G+  +    + YR+     I  G+ N  +  +   ++K
Sbjct: 371 SVCIDWMGGVGFTTDYPQEKFYRDCKVGPIYEGTTNMQLSTIAKFIKK 418


>gi|226372490|gb|ACO51870.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rana catesbeiana]
          Length = 409

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 143/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P     +R+    GL                     A           
Sbjct: 52  PIAAQLDREHRFP--QDQVRQMGQMGLLAVDVPEKLGGAGLDYLAYSIAVEEISRGCAST 109

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   T    + W               P           L+E   
Sbjct: 110 GVIMSVNNSLYLGPILKNATEDQKRKWI-------------TPYCSGDKIGCFSLSEPGN 156

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L +   
Sbjct: 157 GSDAGAASTVARLDGDHWVLNGTKSWITNAWDASATVVFATTDKSLKHKGISAFLVEMPS 216

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD+  + ++
Sbjct: 217 PGLSLGKKEDKLGIRASSTANLIFEDCR---IPRENLLGKPGMGFKIAMQTLDAGRIGIA 273

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     ++  +AD+AL + +A  L++R A   D
Sbjct: 274 SQALGIAQAALDCAVDYAEKRIAFGAPITKLQAIQFKLADMALALESARLLTWRAAMLKD 333

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A+++A        + A  +  +A++ +GG GY+ E    RHYR++    
Sbjct: 334 NKKPYTKEAAMAKLVA-------SEAATRISHQAIQILGGMGYVTEMPAERHYRDARITE 386

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L + N L K
Sbjct: 387 IYEGTSEIQRLVIANQLVK 405


>gi|332665924|ref|YP_004448712.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334738|gb|AEE51839.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 385

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 134/374 (35%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER  K+E+    +  ++R    G    +    +          + A             +
Sbjct: 30  ERDSKMEYP---YEQIKRMGELGFLGMMVSPEYGGGGMDSLSYVLAMEEISKVDNSCSVI 86

Query: 152 MS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           MS  +      +    +      + PK+ S E+                  L+E   G+D
Sbjct: 87  MSVNNSLICWGLETFGSDAQKAKYLPKLASGEW-------------IGSFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +    + D         W  +   S   +++AQ    +G   +  L+ + S  G+
Sbjct: 134 ATSQRTTAVDMGDYYLLNGTKNWITNGGTSKLHLVMAQTNPELGSRGINCLIVETSSEGV 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                ++K+G RS+ T  + +++        +     G    MK L    +  A  ++  
Sbjct: 194 AIGAKEDKLGIRSSDTHTIMYTDVKVPKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              S   A+ Y++ R   G  +     +   +AD+A++I AA  + +R A   D+     
Sbjct: 254 AGGSYELALAYSKERTTFGKPIHQHQAIAFKLADMAMEIEAAKLMVYRAAWLKDQHMDYV 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             +A A       K +  ++A     EA++  GG G+++E  + R  R++    I  G+ 
Sbjct: 314 AASAMA-------KLYASEVAMRHSVEAVQIHGGYGFVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEKG 461
               + +   +  G
Sbjct: 367 EVQRIVISREVTTG 380


>gi|77462751|ref|YP_352255.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77387169|gb|ABA78354.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 591

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 101/527 (19%), Positives = 188/527 (35%), Gaps = 71/527 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           S   +E  ++A      L+      G R +   V     +     +    G      D  
Sbjct: 38  SAVLEEAGKLARDVLAPLNRVGDMQGCRLENGVVRTPEGFAEAFAQLKEGGWTALDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +         +     +++ A +        +  + S +    T    + W PK+ + ++
Sbjct: 98  YGGQGLPYVMQTAVGEIFVSANMAFNMYQGLTHGAYSAIHAHGTEEQKRTWLPKMVTCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+  G       V  F+VP+ L +     G  N +   ++++K+G   NAT 
Sbjct: 205 ENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--- 344
            L +    G+LLG+L+     +  M     L   +   +    +   A+ YAR R     
Sbjct: 265 VLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNAVAYARDRLQGRS 324

Query: 345 -SGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
            SG          LI  P ++R + D    +  A AL+F  A   D +  + +  A    
Sbjct: 325 LSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLI 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           A +  GG GY+EE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           ++                  +     GK  +   +   S  KE++  AR       L  +
Sbjct: 445 LVG----------------RKLAAEGGKPAMAFFQMIRSFLKENEEDARLKGFLEPLKQA 488

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +    +A M      F          +    L G ++   ++  L L
Sbjct: 489 SKDTQKAAM------FFA---EKGMKNPDEALAGSYDFMTMMGHLCL 526


>gi|51893601|ref|YP_076292.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857290|dbj|BAD41448.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 381

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 135/362 (37%), Gaps = 33/362 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +    +G         +   +   ++ I    L     + A          +  +    +
Sbjct: 43  KLLAENGYLNMHLPEPYGGGMDWVSYAIVIEELARACAVTAVIYEVHCSLHSEAIFHFGS 102

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + P++   E             +     LTE   G+D AAI +   +  D  Y 
Sbjct: 103 EEQKQKYLPRLTRGE-------------ILGAYALTEPGAGSDAAAIRTTAIRDGD-SYI 148

Query: 228 LSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           L+G K F+++   +  +++ A+   +  VG   +   L +    G    +   K+G  ++
Sbjct: 149 LNGEKTFITNGGQAGLYVVFARTNPDPSVGHRGISAFLVEADTPGFSVGKPMEKMGLHAS 208

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHY 338
            T  L F +          +     E  KI +  LD   + ++   V + +A     I +
Sbjct: 209 HTTTLHFEDCRIPASQ---LLGKEGEGFKIAMAILDRGRIGIAAQAVGITQAALEDSIKF 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ RH  G  + +   +   IAD+A D+ AA  L +R A    +    ++E         
Sbjct: 266 AKERHTFGKPIAEHQAIAWKIADMATDLEAARLLLYRAAFLMQQGVRATKE-------IS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K +  +MA     EA++  GG GY++E  + R  RE+    +  G+     L +   L
Sbjct: 319 MAKLFASEMAMKHTVEAVQIHGGYGYMQEYRVERLMREAKITQLYEGTSEIQRLVISRAL 378

Query: 459 EK 460
            +
Sbjct: 379 LR 380


>gi|284048916|ref|YP_003399255.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953137|gb|ADB47940.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 377

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 159/403 (39%), Gaps = 36/403 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   QEL  M            P  E  D+     A   + +++   GL   +   
Sbjct: 2   DFALTEEQQELQAMVKDF--VDKEIVPYTEEMDRENH--ARPEIFKKAGDMGLLNLVVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +          I  A +Y     E G   +   TS +  AL + P +       +   +
Sbjct: 58  EYGG---PGLDSITIATIY----EELGKGCAGIATSIAANALASYPIL-------LAGND 103

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                +  +          LTE   G+D  A+ ++  K  D  Y L+G+K F+++  ++D
Sbjct: 104 EQKKYQCDLLNDGKLAAFALTEPSAGSDAGAVATKAVKDGDH-YVLNGNKVFITNGGIAD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +F++ A      G   +   +      G    R ++K+G R + T EL   +        
Sbjct: 163 SFLVFANTRKTGGIRGLTAFIVPKDTPGFSVGRKEDKMGIRPSNTCELILEDVVVPESMR 222

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
           +       +  +I +  LDSA   V+ + V LA+     A HYAR R   G  +    ++
Sbjct: 223 VGREG---QGFRIAMNTLDSARPFVAAVAVGLAQSCLDIAAHYARERRQFGQPIASFQMV 279

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+A+ +  A  +  +     D+     +EAA        +K +   +A  V  +A
Sbjct: 280 QAMIADMAMKVETARLMVHKACWMRDQGVEFGKEAAM-------SKCFASDVAMEVATDA 332

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY+++  + +  R++    I  G+     + + N +
Sbjct: 333 VQIMGGYGYMKDYPMEKKMRDAKILQIYEGTNQIQRMVIANKI 375


>gi|169632134|ref|YP_001705870.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169150926|emb|CAO99533.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 375

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PNASDWDRDGTFP--KETLTQMGQLGFMGMLVSEEWGGSDTGNLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +MS   +   +  L            K  + E       P+ +  +     LTE   G
Sbjct: 82  STIMSVHNSVGCVPIL------------KFGTDEQKERFLKPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAI ++  K  D  Y L+G K F++S   +   I+ A  +   G   +   L     
Sbjct: 130 SDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRET 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++       +LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATRYAKERITFGKPIFEHQTIAFRLASMATEIEAARQLVHYAARFKEVGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +M   V + A++  GG GY+ +  I R YR++    I  
Sbjct: 309 PCLNEASMA-------KLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|11499826|ref|NP_071069.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304]
 gi|2648280|gb|AAB89011.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304]
          Length = 402

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 154/410 (37%), Gaps = 37/410 (9%)

Query: 58  LELLGEYVLSCT---AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           L++L +++L+      +E AR  A    P         E  D+ E  P    L +++   
Sbjct: 4   LKMLADFILTEDQKAIKEAAREFAEKEFPN------YVEECDREEKFP--FELWKKAAQL 55

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G         +                +       G +++ +  S  ++A        K 
Sbjct: 56  GFIGMAIPEQYGGQGLGVLDSCLVVEEFWRVDGGLGMILATTFGSEQIIA-FGNEEQKKK 114

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P             P+ K         TE + G+D+A I ++  K  D         +
Sbjct: 115 YLP-------------PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDEYVINGTKMF 161

Query: 234 FLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +  ++D +I+LA+ +         +   L +    G+   +LKNK+G R++ T E+ F
Sbjct: 162 ITNGSIADYYIVLARTDPNPPKRHHGMSVFLVERDMPGVQANKLKNKLGIRASDTAEVVF 221

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N       L+G              +  +  A  ++   + +   A HYAR R V    
Sbjct: 222 KNVRVPKENLIGQEGQGFYQTMMFFNITRIPVAFQALGLAQGAFELAYHYARNREVFERK 281

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L D  V +  +A +  ++ AA  L+++ A   D      +       +  + KY+  K A
Sbjct: 282 LADFQVTQEKLAKMRTELEAARLLAYQAAYFQD------KMGMPDPGLTAMAKYYTAKAA 335

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ++ EA++  GG G++ E+ I+R YR+     I  G+    +  +   L
Sbjct: 336 QFIVNEALQIHGGYGFMGEQHISRMYRDVRILEIYEGTREIEMEVIARSL 385


>gi|312141576|ref|YP_004008912.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677204|ref|ZP_08156870.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890915|emb|CBH50234.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551901|gb|EGD21597.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 385

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 128/378 (33%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     L   ++ G +      +++                      +
Sbjct: 33  PYAKEVDEKSRFP--KEALDALVNSGFNAVHVPEAYDGQGADSVAACIVIEEVARVCGSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P+I +                     L+E+  G
Sbjct: 91  SLIPAVNKLGTMGLILKGSEELKKQVLPEIAAG--------------AMASYALSEREAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 137 SDAASMRTRAKADGDEWILNGSKCWITNGGQSTWYTVMAVTDPDKGANGISAFMVHKDDE 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G     L++K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 197 GFVVGPLEHKLGIKGSPTAELYFENCR---IPGDRIIGEPGTGFKTALETLDHTRPTIGA 253

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + LA+     A+ Y + R   G  + D    +  +AD+A+ I +A  + +  A   + 
Sbjct: 254 QALGLAQGAFDAAVAYTKDRKQFGKSIADFQNTQFMLADMAMKIESARLMVYTAAARAER 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++   K     +A  V   A++  GG+GY  +  + R  R++    I
Sbjct: 314 GEKN------LGFISAAAKCLASDVAMEVTTNAVQLFGGAGYTTDFPVERMMRDAKITQI 367

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L K
Sbjct: 368 YEGTNQIQRLVMSRALLK 385


>gi|307941533|ref|ZP_07656888.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307775141|gb|EFO34347.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 593

 Score =  282 bits (723), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 103/564 (18%), Positives = 199/564 (35%), Gaps = 92/564 (16%)

Query: 61  LGEYVLSCTAQELARMANYNTPQL-HAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHC 117
           L + ++     E  R A+     L       G   +  +V   P W  L  R I  G + 
Sbjct: 31  LADDLVDAILTEAGRFASEEIAPLNKVADTHGTPLKDGEVSTPPGWKELYHRWIEGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                S       Q   +  A L L         + P++T  ++ AL    + ++   + 
Sbjct: 91  LSSPESAGGQGLPQ--MLSTAALELWNSGSMAFAIGPTLTIGAIEALEKHASDKLKATYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D+ A+ S+ ++  DG Y + G K ++
Sbjct: 149 EKLVSGEWMGT-------------MNLTEPQAGSDLNALKSKAERAGDGTYRIFGQKIYI 195

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D       ++LA++         +  FLVP+ L +     G  N +    +++K+
Sbjct: 196 TYGEHDMTDNIVHLVLARLPDAPAGTRGISLFLVPKFLVNEDGSLGDRNDVRCAGVEHKM 255

Query: 280 GNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   + T  + +       G+L+G+ N     +  M     L   +  +     +  +A 
Sbjct: 256 GIHGSPTCTMIYGDNDGAIGWLIGEENKGLACMFTMMNNARLAVGVQGLGVAERACQDAY 315

Query: 337 HYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            YA  R               +   P +KR++  +      A ++ +  A++ D A + +
Sbjct: 316 AYAMERKQGRVPGQKEEGMAPIAHHPDIKRSLLGMRARTQVARSICYACAHAIDMANTAT 375

Query: 388 E------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +       +  A ++ PI K         V +  ++  GG GY+EE  +A+H R++    
Sbjct: 376 DRDQKTFWSERAGLLTPIAKALSTDFGVEVASIGVQIHGGMGYVEETGVAQHLRDARIAP 435

Query: 442 ILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ-----------DLGSSGKKVITILR 488
           I  G+       L +  L   G +        L +           DLG++G ++   L 
Sbjct: 436 IYEGTNGIQSIDLIMRKLPLSGGDHVRGFIQELREVADEAIQSNRDDLGTAGARLNAALA 495

Query: 489 DSISLCK-----EDKGL-------ARFLTEKIALASSAAAL----YRAGMND-------- 524
           D           + +G        A        +    A L     R+GM++        
Sbjct: 496 DLEDATDWMLSAQAEGRVNDALAGATPFLRLAGVTLGGALLTKGALRSGMDNPKARSLRA 555

Query: 525 -IADVFLENRFLDNCHSTHCMLHG 547
            +A  +      +       +L  
Sbjct: 556 LLARNYCATLLGEVAGLKEDILSS 579


>gi|66045706|ref|YP_235547.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256413|gb|AAY37509.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           B728a]
          Length = 387

 Score =  282 bits (723), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA   + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L +  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGMLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|172040335|ref|YP_001800049.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851639|emb|CAQ04615.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 389

 Score =  282 bits (723), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 134/394 (34%), Gaps = 23/394 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              QEL R A     +     P  +  D+ E  P     L+     G +           
Sbjct: 14  EEYQEL-REAIRGLAE-RDIAPYAQDVDENERFPE--EALKALNESGFNAIHVPEECGGQ 69

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +            +  + + +      + L  +  + ++  P I + E     
Sbjct: 70  GADSLAAVIVIEEIARVCGSSSLIPAVNKLGTMGLILNGSEELKQEVLPDIANGE----- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE+  G+D AA+ ++  +  D         +  +   S  + ++A
Sbjct: 125 ---------LASYALTEREAGSDAAAMKTRAVREGDEWVINGSKCFITNGGRSSWYTVMA 175

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNV 304
             +   G   +   +      G     L++K+G + + T EL F +       ++G+   
Sbjct: 176 VTDPEAGARGISAFMVHKDDPGFRVGGLEHKLGIKGSPTAELYFEDCRVPASRMIGEEGT 235

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                              ++   + +  +A+ Y + R   G  + D    +  +AD+ +
Sbjct: 236 GFKTALQTLDHTRPTIGAQALGIAQGAFDQAVAYVKERKQFGKAIADFQNTQFMLADMKM 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  + +  A++ +     +E      +MA  +K +   +A  V  +A++ +GG G+
Sbjct: 296 KIDAARLMIYTAASNAERG--VAEGGERLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGF 353

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + R  R++    I  G+     + +   +
Sbjct: 354 TRDFPVERMMRDAKITQIYEGTNQICRMVMGRQI 387


>gi|297617070|ref|YP_003702229.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144907|gb|ADI01664.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 146/378 (38%), Gaps = 34/378 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            ER  +  F P+   + R+     L    +++ +        ++ I    L  +      
Sbjct: 29  AERDREQRFDPS---IWRKMAELDLCGIPFEQEYGGAGLGYLSYIIAVEELSRVCAATGI 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L S        +     P     +   + S E                   +TE   G+
Sbjct: 86  TLSSHISLCCWPIHEYARPEQKAKYLRMLTSGE-------------KMGAFAMTEPWAGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
           D ++I ++ +   D         +  ++P +D +I++A+             L+ +    
Sbjct: 133 DASSIRTRCRLEGDEWVLDGTKLFTTNAPYADIYIVMARTGSADDRHRNTCALVVEKGSP 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           G  + R  +K+G R +AT +L F N     +   N+     E   I +  LD   + V+ 
Sbjct: 193 GFTFGRQDDKMGIRGSATCQLVFDNCR---IPRENLLGQVGEGFAIAMRTLDGGRIGVAA 249

Query: 328 MRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+A +     YA+ R      +     ++  +AD+A  I AA  L+++ A   + 
Sbjct: 250 QAVGIAQAAYEYALRYAKERIQFEKPIATFQAIQFKLADMATRIEAARLLTYQAAWLQEN 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S+E+A+A       K +   +A  V  EA++ +GG GYI++  + R+ R++    I
Sbjct: 310 GFPYSKESAFA-------KVFAGDVAMWVTTEAVQVLGGHGYIKDHPVERYMRDAKITQI 362

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N + K
Sbjct: 363 YEGTAEVQKMVIANHILK 380


>gi|260221282|emb|CBA29691.1| Long-chain specific acyl-CoA dehydrogenase,mitochondrial
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 412

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 131/379 (34%), Gaps = 34/379 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         +  ++  +G  C      +      + + +                
Sbjct: 54  FHADWEEQGYVAREVWNKAGENGFLCMTMPEEYGGSEADKLYSVIQMEELARGGFTGIGF 113

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  +    TP     + PK+ S E                 + ++E   G+D+
Sbjct: 114 GLHSEIVAPYILHYGTPEQKARYLPKLASGEM-------------VGAIAMSEPAAGSDL 160

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             I S   +  DG Y L+G K F+++   +D  +++A+     G      LL +    G 
Sbjct: 161 QGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGTSLLLVERGMPGF 220

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
              +   K+G ++  T EL F N        L  +    +    L+       L  AI +
Sbjct: 221 SVGQRLKKMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICLMEQLPWERLQIAIGA 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           VS  + ++   + Y + R V G  +      +  +A++   +  A     +        K
Sbjct: 281 VSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVARVFVDKCCELI--GK 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            + + A      A + KYW   +   V+ E ++  GG GY+ E  I R Y ++    I  
Sbjct: 339 DQLDTA-----TASMAKYWTTDLQCKVMDECVQLFGGYGYMWEYPITRAYADARVQRIYG 393

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M   +   +  G  
Sbjct: 394 GTNEIMKEVITRSMGLGGK 412


>gi|291522107|emb|CBK80400.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 387

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 129/383 (33%), Gaps = 38/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P            G+    +   +        ++      L +     
Sbjct: 26  PRAHEIDEEEKFPM--DARNGLAEMGMMGMYFPEEYGGAGLSYLSYIAVCEELAVHCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L +     +  +    T    + +   + S E                  GLTE   
Sbjct: 84  SVVLSAHESLCSWPIYKYGTEEQKQKYLTALASGE-------------KLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGCFLVPRL 261
           GTD A   +  +   D         +  ++  +D F++ A V      E       +   
Sbjct: 131 GTDAAMQKTVAKDEGDHWVLNGSKVFITNAQYADIFVVFAMVYRDDYKERPYTNKDISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320
           + +    G   Q  + K+G R ++T  L F N         N+     +  K+ +  LD 
Sbjct: 191 IIEKGFEGFSVQGHEMKMGIRGSSTCSLYFDNCIVP---KENLLGEQGKGFKVAMTTLDG 247

Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +A     E + Y + R   G  +      +  +AD+   + AA  L +R
Sbjct: 248 GRIGIAAQAIGIAQGAINETVAYTKERVQFGKPIWKFQNTQFQLADMQAKVDAARLLVYR 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +  + +  S  AA A+++A        + A  V    ++ +GG+GY  E    RH R
Sbjct: 308 AAQAKQDGEPHSHLAAMAKLVA-------SETASDVARRCVQLVGGNGYSREYPFERHMR 360

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++    I  G+     + +   L
Sbjct: 361 DAKITEIYEGTSEVQRMVIAGWL 383


>gi|241661981|ref|YP_002980341.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864008|gb|ACS61669.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 595

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 93/486 (19%), Positives = 180/486 (37%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFKEAYQQYVEAG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  +          I  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPSLGCDPEYGGQGLPI--LINNALYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S  +  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPLADGSYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDASGNPGERNGVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   + S+    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +I  P ++R +           A S+ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEGGRAFSYWIALQIDREL 376

Query: 385 SRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S  +E      A    ++ PI K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHKDESVRKDAADLVALLTPIAKAFLSDNAFIATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   +++D +     ++
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGAKMKKFGKLVQDFVEAEGTNE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFI 489


>gi|89092344|ref|ZP_01165298.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Oceanospirillum sp. MED92]
 gi|89083432|gb|EAR62650.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Oceanospirillum sp. MED92]
          Length = 598

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 116/557 (20%), Positives = 211/557 (37%), Gaps = 74/557 (13%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
               MN   S +  +A +A  P       E   + +++   +E  ++AN     L+    
Sbjct: 7   PQKDMNFALSHNARMAELAQLPG-----FEEATDDMVAAILEEAGKVANEVLSPLNEVGD 61

Query: 89  PGGERWDKVEFH-PAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G + + V+   PA  A   ++    G     +D  F       A  I    ++  A +
Sbjct: 62  HTGVKLEGVDVPTPAGFADAYQQFAEGGWGSLQFDPEFGGQGLPYALSIPVMEMWQSANM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G     S  +   +    +  +   + P++ S E+  T             + LTE +
Sbjct: 122 AWGLCPLLSQGAVEAIFHNGSDELKAKYLPQLVSGEWTGT-------------MNLTEPQ 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGC 255
            G+D+AAI S  + + D  Y + G K F++    D       ++LA++         +  
Sbjct: 169 AGSDLAAIRSTAKPVGDH-YRIKGQKIFITWGEHDMAENIIHLVLARLPDAPPGVKGISL 227

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           F+VP+ L +     G  N      L++K+G  ++ T  + F +     G+L+G+ N    
Sbjct: 228 FVVPKFLVNDDGSLGERNDAKCVSLEHKLGIHASPTCVMAFGDDEGAIGYLVGEENRGLA 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------GGILIDQPVMKRAIA 360
            +  M     L   +  V+    +   A+ YA  R  S          +I    ++R + 
Sbjct: 288 CMFTMMNNARLAVGLQGVAISERAYQHALEYAHDRVQSPPVGSREAAPIIQHADVRRMLL 347

Query: 361 DIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +     A  AL++    S D A        R++E+A A  + PI K WC + A  V + 
Sbjct: 348 TMKTMTEAGRALAYDACASLDFAHHSEDPAIRAKESARAAYLTPIVKGWCTEFAQEVTSL 407

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL 472
            ++  GG G+IEE   A+HYR++    I  G+     LD++    L  G      + + +
Sbjct: 408 GVQVHGGMGFIEETGAAQHYRDARILPIYEGTNAIQALDLVGRKTLFDGGEAGAAVQAEI 467

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
            +        +I  L+   S   E   L   L  ++A  + A  L     +D+       
Sbjct: 468 AE--------LIEQLQAQGSFAAEATQLQAAL--ELAKTAQA-ELLNGAKDDVQ------ 510

Query: 533 RFLDNCHSTHCMLHGRF 549
               +    + ML G  
Sbjct: 511 -LAGSVAFNYLMLMGTL 526


>gi|148548730|ref|YP_001268832.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512788|gb|ABQ79648.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 375

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 132/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK    P     +      GL   +    +            A           
Sbjct: 24  PFAEQWDKDHRFP--KEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L     +  + +               P+   ++     LTE + 
Sbjct: 82  STIMSVHNSVGCVPILRFGNEQQKEQFL-------------TPLATGAMLGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F N    +   L     G    +  L    +  A  +
Sbjct: 189 PGYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLGAEGEGYKIALANLEGGRIGIASQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  LI+   +   +AD+A  ++ A  +    A   D  +
Sbjct: 249 VGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKVSVARQMVLHAAALRDAGR 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V ++A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDIQRMVIARNL 375


>gi|91978156|ref|YP_570815.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
 gi|91684612|gb|ABE40914.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
          Length = 390

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 145/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  +  DK    P    L  +    GLH    D  +  
Sbjct: 12  DLGETADAIRETVRDFASNEIAPRADAIDKTNTFP--RDLWPKLGALGLHGITVDEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H +    +   +        + S    + ++        + + PK+ S E+  
Sbjct: 70  AGLGYLEHCLAVEEISRASASVGLSYGAHSNLCVNQISRNGNDAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRYVLNGNKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPNAGPRGMTAFLVEKGMKGFSTAQKLDKLGMRGSDTGELVFQDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   +  M+  L   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPLGIMQACLDVVLPYVHERKQFGEPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGETTREDAAGA-------ILFAAEKATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|300857084|ref|YP_003782068.1| putative acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM 13528]
 gi|300437199|gb|ADK16966.1| predicted acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM
           13528]
          Length = 380

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 150/378 (39%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P    L + +   GLH       +       +++  A     +A+++A
Sbjct: 26  PHVQELDEKGECP--RELFKYAFDMGLHMLEIPEEYGGTGL--SYETTAMIFEELAKIDA 81

Query: 149 GHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G+ ++   T  ++  V L  T    K +A  I    +               G  LTE  
Sbjct: 82  GYAITLVTTFVALRNVILSGTKEQGKYFADIIGKGNF--------------AGFALTEPN 127

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D A +     K  D  Y L+  K F+++  ++  F+ + +     G   +   + D 
Sbjct: 128 AGSDPAGMRGTAVKDGDE-YILNATKTFITNGALASVFVGIFKTNPEAGNKGISAFIVDA 186

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KILIYLDSAI 322
           +  G+   + ++K+G R + T ++ F N        L       +       L     A 
Sbjct: 187 NTLGITIGKHEDKMGLRLSNTTDVTFENVRVPASNMLGEEGSGFKLALNSLNLSRAFVAT 246

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++V  M+ +L E++ YA+ R   G  +I   ++++ +AD+A+ I A+ AL        D 
Sbjct: 247 LAVGIMQRALDESVKYAKERKQFGKPIIKFQMVQQMLADMAIKIEASRALVNNTMKLMDN 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E A       ITK +    A  V + A++  GG GY +E  + +  R+     I
Sbjct: 307 GNLVRKEGA-------ITKAFVSDCAQEVTSNAVQIFGGYGYSKEYPVEKLMRDCKVFQI 359

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   LEK
Sbjct: 360 FEGANQIQRMTIAGALEK 377


>gi|193713629|ref|XP_001947919.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 411

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 140/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P     ++     GL       S             A          A
Sbjct: 54  PVAAKVDKEHLFPE--KQIKEMGELGLMAIDIPESLGGTGLDYLAYAIAIEEISRGCASA 111

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     +      +  +++     + E                  GL+E   
Sbjct: 112 GVIMSVNNSLYLGPINKFGNDQQREEFIRPFTTGE-------------KIGCFGLSEPGN 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++   K            W  ++  + A ++ A  +       +   L     
Sbjct: 159 GSDAGAASTMAVKSGSSWILNGTKSWITNAHEAKASVVFATTDKTKKHKGISAFLVRREY 218

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    + ++K+G R ++T  L F +     + + N+   P    KI ++ LD+  + ++
Sbjct: 219 PGFSLGKKEDKLGIRGSSTSNLIFEDCS---IPEENILGEPGMGFKIAMMTLDAGRIGIA 275

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     ++  IAD++L + +A  L++R A   D
Sbjct: 276 SQALGIAQASLDVAVEYATKRIAFGAPISKLQSIQNKIADMSLRVESARLLTWRAAVLKD 335

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K  ++EAA A++ A     +          + ++ +GG GY+ +    RHYR++    
Sbjct: 336 EHKPYTKEAAMAKLAASEAATFN-------AHQCIQVLGGMGYVSDMPAERHYRDARITE 388

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 389 IYEGTSEIQKLVIAGNIFK 407


>gi|16125599|ref|NP_420163.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13422699|gb|AAK23331.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 141/375 (37%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G      +         +              +  
Sbjct: 26  PHSADWDENKHFPV--DVLRQAAELGFAGIYVNEDVGGSGLSRLDASIIFEALSYGDVPV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    ++ M+    +  + + + P++ + E             +     LTE   G
Sbjct: 84  AAYLTIHNMASWMIDRFGSDDLRQRYLPRLTTME-------------LIASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +  +   D      G  +     +SD ++++A+  G  G   V   + +    
Sbjct: 131 SDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGE-GAKGVSAFVVEKGME 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           GL +   + K+G  +  T ++ F N    +   +     G    M  L    L+ A  S+
Sbjct: 190 GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGGRLNIASCSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L  A  Y   R+  G  L D   ++  +AD+A ++ AA  +  R A++ D    
Sbjct: 250 GGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRAAHALDSKHP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A  +  + K +       V  +A++  GG GY+++  + R  R+   + IL G
Sbjct: 310 E------ATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   + +
Sbjct: 364 TNEIMRVIIAREMFR 378


>gi|114800043|ref|YP_759627.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114740217|gb|ABI78342.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 139/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E WD+    P    ++R +   G                +              +  
Sbjct: 26  PHSEAWDRDSHFPV--DVIRSTAELGFAGIYVKEDVGGSGLTRTDAALIFEQLSYGDVST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    ++ M+    +      W P++ S E             +     LTE   G
Sbjct: 84  AAFISIHNMASWMIDTFGSEEQRAAWVPRLTSME-------------LIASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K  D  Y ++G K F+S    SD ++++A+     G   V   + +   
Sbjct: 131 SDAASLKTKAVKEGDD-YVITGTKQFISGAGTSDVYVLMARTSDD-GAKGVSAFIIEKDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G +S  T ++            +G+                L+ A  +
Sbjct: 189 PGLSFGANERKMGWKSQPTRQVILDGVRVPAANRIGEEGHGFRFAMAGLDGGRLNIAACA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G +++L +A+ YA+ R   G  L +    +  +AD+  ++ AA  + +  A   D   
Sbjct: 249 LGGAQLALDKAVVYAKERRQFGKALAEFQNTQFKLADMETELQAARVMLYEAAGRLDRKA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +    A  V  +A++  GG GY+ +  + R  R+   + IL 
Sbjct: 309 PD------ATRWCAMAKRFVTDTAFKVANDALQIHGGYGYLADYHVERIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+   M + +   + KG
Sbjct: 363 GTNEVMRVIISRDMLKG 379


>gi|42781609|ref|NP_978856.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|52142954|ref|YP_083875.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|206974102|ref|ZP_03235020.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217959999|ref|YP_002338555.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|222096085|ref|YP_002530142.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228985654|ref|ZP_04145807.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229091537|ref|ZP_04222746.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|229139191|ref|ZP_04267766.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229156137|ref|ZP_04284235.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|229196721|ref|ZP_04323464.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|42737532|gb|AAS41464.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|51976423|gb|AAU17973.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|206748258|gb|EDZ59647.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|217063605|gb|ACJ77855.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|221240143|gb|ACM12853.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|228586796|gb|EEK44871.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228627320|gb|EEK84049.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228644250|gb|EEL00507.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|228691831|gb|EEL45579.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|228774049|gb|EEM22462.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324326516|gb|ADY21776.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 381

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|30262538|ref|NP_844915.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47527836|ref|YP_019185.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|229602030|ref|YP_002866861.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|30257170|gb|AAP26401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47502984|gb|AAT31660.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|229266438|gb|ACQ48075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 381

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGIEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A+++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAVLAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|110834963|ref|YP_693822.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648074|emb|CAL17550.1| acyl-CoA dehydrogenase, putative [Alcanivorax borkumensis SK2]
          Length = 598

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 97/559 (17%), Positives = 199/559 (35%), Gaps = 66/559 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK----- 96
           +L  ++          L+ +   +L+   +E A+ +     +L      G+         
Sbjct: 14  VLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSEN---ELAPLNRSGDEEGCGFENG 70

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V     +     + +  G      D  F       +  I  + +   A          S
Sbjct: 71  VVTTPKGFKEAYVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSANWSWSMYPGLS 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             + + +    T    + + PK+ S E+  T             + LTE   G+D+  + 
Sbjct: 131 HGAVATIEEHGTEEQKQGYLPKLTSGEWTGT-------------MCLTEPSCGSDLGILK 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED 264
           ++ +   DG Y ++G K F+S+   D       I+LA++ G       +  F+VP+ + D
Sbjct: 178 TKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTD 237

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           G+      N +    +++K+G +++AT  + F    G+L+G  N     +        L 
Sbjct: 238 GNGSVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLG 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
           +AI  V+   +     + YA+ R                  +I  P ++R +        
Sbjct: 298 TAIQGVAHAEIGFQGGLTYAKERLAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAE 357

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL +  A   D+ K   +EAA         ++ PI K +  +         ++  GG
Sbjct: 358 GGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVTETGLEAANHGVQIYGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDL 476
            G+I E  + ++ R++  +++  G+     LD+L    L+ +G  L  F ++     +  
Sbjct: 418 HGFIREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEAN 477

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLEN 532
           G +G  +   +       KE   L + +  +         +A+  Y      +   +L  
Sbjct: 478 GENGD-LKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWA 536

Query: 533 RFLDNCHSTHCMLHGRFNA 551
           R      +      G  + 
Sbjct: 537 RMASVAQAQLDAGAGDEDF 555


>gi|330801552|ref|XP_003288790.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium
           purpureum]
 gi|325081179|gb|EGC34705.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium
           purpureum]
          Length = 411

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 139/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     DK    P    + ++    GL        +  + +   AH I    L   +   
Sbjct: 55  PMAADVDKKNAFPM--EMWKKMGDLGLLGITAPSKYGGLDLGYTAHCIAMEELSRASASV 112

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +         + + PK+ + ++                L ++E   
Sbjct: 113 ALSYGAHSNLCINQITRNANEAQKEKYLPKLITGDF-------------VGALAMSEPNA 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ +  +K + G        W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 160 GSDVVSMKTNAKKTNGGWVLNGSKMWITNGPDADVLVVYAKTDINAGSKGITAFLIEKGM 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G    +  +K+G R + T EL F + F     D NV       +K+L+       L  +
Sbjct: 220 KGFSTGQKLDKLGMRGSNTCELIFEDCFVP---DENVIGQVGSGVKVLMSGLDYERLVLS 276

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  L   I Y  +R   G  + +  +M+  +AD+   + A+ +  + +A S D
Sbjct: 277 AGPLGIMQACLDNVIPYIHQREQFGKPIGEFQLMQGKVADMYTILNASRSYVYSVAKSAD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +  ++             +  + A  +  +A++ +GG+GYI E    R  R++    
Sbjct: 337 NGYTSRKD-------CAAVILYTAENATQMALQAIQTLGGNGYINEFPTGRLLRDAKLYE 389

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 390 IGAGTSEIRRMLIGREL 406


>gi|326435835|gb|EGD81405.1| isovaleryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 429

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 139/399 (34%), Gaps = 32/399 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW---HALLRRSIHDGLHCSIWDR 122
           L+ T  EL    N          P  +  DK   +  W       ++    GL       
Sbjct: 50  LTDTQLELKETINKFA--QQELAPYAQDIDK---NNGWDNLREFWKKLGDLGLLGITAPE 104

Query: 123 SFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +         H I    L   +   A    + S    + +         + + PK+ S 
Sbjct: 105 EYGGSALGYTEHVIAMEELSRASGSIALSYGAHSNLCVNQIVRNGNEEQKQKYLPKLISG 164

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+ ++  + Q+  D         W  + P +D
Sbjct: 165 EHMG-------------ALAMSEPGSGSDVVSMQLRAQEDGDSYVLNGNKFWITNGPDAD 211

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+ +       +   L +    G    +  +K+G R + T EL F N       +
Sbjct: 212 VLVVYAKTDMSAHQHGITAFLVEKDFEGFSTAQKLDKLGMRGSNTCELVFENCRVPKENV 271

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG++N     +     L  L  A   +  M+ ++  +  Y   R   G  +    +M+  
Sbjct: 272 LGEVNKGVYVLMSGLDLERLVLAGGPLGLMQAAVDVSFDYVHERKQFGKPIGTFQMMQAK 331

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   ++A  A  + +A   D+    S++             +  + A  V  +A++C
Sbjct: 332 LADMYTTLSANRAYVYSVAKKCDKGIVESKD-------CAGVILYSAEAATKVALDAIQC 384

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +GG+GYI +    R  R++    I  G+     L +   
Sbjct: 385 LGGNGYINDYPTGRIMRDAKLYEIGAGTSEIRRLLIGRA 423


>gi|168052474|ref|XP_001778675.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669993|gb|EDQ56570.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 388

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 139/408 (34%), Gaps = 30/408 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           + S  +  L   A      +  +      P     D     P    L +      LH   
Sbjct: 1   MGSGRSLLLDDTAEQFKESVRHFSQENIAPHAAAIDHNNSFPTDVNLWKLMGDFNLHGIT 60

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               F  +      H I    +   +   A    + S    + +    T    + + PK+
Sbjct: 61  VPEEFGGLGLGYLYHCIAMEEISRASGAVALSYGAHSNLCINQLVRNGTQAQKEKYLPKL 120

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +  K+  G        W  + P
Sbjct: 121 ISGEH-------------IGALAMSEPNSGSDVVSMKCRAGKVEGGYVLNGNKMWCTNGP 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
            ++  I+  + +   G   +   + +    G    +  +K+G R + T EL F N F   
Sbjct: 168 KANTLIVYVKTDVHAGAHGITAFIIEKGMEGFSTAQKLDKLGMRGSDTCELVFENCFVSN 227

Query: 297 -FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             +LG        +     L  L  A   +  M+  L   + Y R R   G  + +  +M
Sbjct: 228 DQILGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACLDVVLPYVRERQQFGKPIGEFQLM 287

Query: 356 KRAIADIALDIAA-ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +  +AD+   + A + A  + +A   D   +  ++             +  + A  +  +
Sbjct: 288 QGKLADMYTKMQASSRAFVYSVARMCDAGHADRKD-------CASVILFSAENATQMALQ 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           A++C+GG+GY+ E    R  R++    I  G+     + +   L K  
Sbjct: 341 AIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFKEG 388


>gi|313205895|ref|YP_004045072.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445211|gb|ADQ81566.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022207|gb|EFT35235.1| acyl-CoA dehydrogenase domain protein [Riemerella anatipestifer
           RA-YM]
 gi|325336665|gb|ADZ12939.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 130/359 (36%), Gaps = 22/359 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +++    G    + D  +          + A  +  +A+++A   +  SV ++ + A 
Sbjct: 40  EQVKKMGELGFLGMMVDPKYGGAGMDSVSYVLA--MEEIAKVDASAAVIMSVNNSLVCA- 96

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                       K  S E       P+    V     L+E   G+D  +  +  +   D 
Sbjct: 97  ---------GLEKYASEEQKQKYLVPLASGEVIGAFALSEPEAGSDATSQKTTAEDKGDY 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +   +  +I++AQ     G   +   + +    G      ++K+G R +
Sbjct: 148 YLLNGTKNWITNGSTATYYIVIAQTHPEKGHKGINAFIVERGWEGFEIGPKEDKMGIRGS 207

Query: 285 ATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L F++        +     G    M +L    +  A  ++     +   A+ YA+ 
Sbjct: 208 DTHSLLFTDVKVPKENRIGEDGFGFKFAMAVLNGGRIGIASQALGIASGAYELALKYAKE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +I+   +   +AD+A  I AA  L  + A   D+ K  SE  A A       K
Sbjct: 268 RKAFGTEIINHQAVAFKLADMATQITAARMLCLKAAAEKDQGKDISESGAMA-------K 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  K A     EA++  GG GY+ E  + R  R++    I  G+     + +   + K
Sbjct: 321 LFASKTAMDTTIEAVQIHGGYGYVREYHVERMMRDAKITQIYEGTSEIQKIVISRSIAK 379


>gi|332285779|ref|YP_004417690.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
 gi|330429732|gb|AEC21066.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
          Length = 384

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 136/359 (37%), Gaps = 26/359 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        +  +    +   + A  +   +      + + +   +  + +  T +
Sbjct: 45  RELGLFGMTIPEEYGGLNLSMEEEVLFAFEIAKTSPAFRSLIGTNNGIGSQGIVIDGTEQ 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E             +     LTE   G+D A++ +   +  D      
Sbjct: 105 QKQKYLPRLASGE-------------IIGSFALTEPGSGSDAASLRTTAVRDGDHYILNG 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P +D F ++A+ +    G   +   + + +  GL   ++  K+G R   T +
Sbjct: 152 TKRFITNAPEADVFTVMARTDPAARGGSAISAFVVEKNTAGLSLGKIDKKMGQRGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           +   +        +      G    MK+L    L  A +SV      L +A+HYA  R  
Sbjct: 212 VVLEDCRVPAANLIGGREGVGFKTAMKVLDKGRLHIAAVSVGVAERMLNDALHYAMEREQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA ++    A   DE +  S E       A  +K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAARSMVIDAARRRDEGQDVSTE-------ASCSKLFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V   A++  GG+GY+ +  I R YR+     I  G+     L +   + +   
Sbjct: 325 TEMCGRVADRAVQIYGGAGYVSDYGIERFYRDVRLFRIYEGTTQIQQLVIARNMIRAAK 383


>gi|294012056|ref|YP_003545516.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675386|dbj|BAI96904.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 380

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 76/406 (18%), Positives = 146/406 (35%), Gaps = 33/406 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +G++ L+     +  MA   T    A  P    WD+    P     +R +   G      
Sbjct: 1   MGQFDLTEDQLAIQEMARRFTA--DAITPFAAEWDEKHIFP--RETIRAAAELGFGSIYV 56

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +   +                    +S    +A M+    +  V   + P +  
Sbjct: 57  SEEAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDRFGSQAVKDKYLPSMVP 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                   LTE   G+D AA+ ++  +  D  Y ++G K F+S    
Sbjct: 117 ME-------------RIGSYCLTEAGSGSDAAALKTRAVRQGDH-YVVTGSKQFISGGGE 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +   ++    G  G   +  L+ +    G+ +   + K+G  S  T ++ F      +  
Sbjct: 163 NEIYVVMVRTGDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFDGVRVPV-- 220

Query: 301 DLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             N+  G  E  +I +       L+    S+ G +  + EA+ Y + R   G  + D   
Sbjct: 221 -ENLVGGEGEGFRIAMMGLDGGRLNIGACSLGGAQRCIDEALSYTKDRKQFGQSIADFQN 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+  ++ AA  L +  A         +E A      A + K        +V+  
Sbjct: 280 TQFMLADMETELQAARTLLYAAAVKV------TENAPDKTRFAAMAKRLATDTGSSVVDR 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG GY+ +  + R +R+   +SIL G+   M + +   + +
Sbjct: 334 ALQLHGGYGYLMDYPVERFWRDLRVHSILEGTNQVMRMIIARDMLR 379


>gi|126652595|ref|ZP_01724759.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905]
 gi|126590586|gb|EAZ84703.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905]
          Length = 555

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/480 (21%), Positives = 204/480 (42%), Gaps = 30/480 (6%)

Query: 35  NAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N ++ D  L  ++       F S  H+EL   GE                  P+L  Y  
Sbjct: 13  NFFTDDDTLQKVLEMMLDKEFSSYAHRELTDFGELCAGAIDVRAKHTDRQGEPRLQRYNA 72

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE   +V  +  +   +  + + G+   +  +    +  K  +    A+ YL++  E G
Sbjct: 73  YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131

Query: 150 HLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +  + +A ++       V + + P + +       +             LTE++G
Sbjct: 132 FYCPVTLTMATAYLLDHYAEEGVKQRFLPHVCATGDMELYEGATF---------LTERQG 182

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPR 260
           G+D+ A   + + + +  Y L G K+F  ++ M    ++LA++EG       +  F VP 
Sbjct: 183 GSDVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIEGAQAGSKGLTLFAVPW 241

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
             EDGS N L  +RLK+K+G ++  + E+EF     +++GD N     + +   L  + +
Sbjct: 242 RNEDGSANQLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDQNKGIYYMLEALNLSRICN 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ S+  MR    EA HY   R+  G  L   P+++  +   A  +    A  F L   +
Sbjct: 302 AVASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLY 361

Query: 381 DE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           D+    +   ++    R+   I K    + A    +EA+E  GG+GYIE+    R  R++
Sbjct: 362 DKVTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDA 421

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496
              ++  G+ N + L+++ L++K     E     + + L   +   ++ I+++ ++    
Sbjct: 422 QVLTVWEGTANILALELIRLVDK-YRAHELFVQEMSERLEVLTDHSLVKIVQEQLTKLSA 480


>gi|24373942|ref|NP_717985.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24348377|gb|AAN55429.1|AE015680_4 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 585

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/515 (19%), Positives = 191/515 (37%), Gaps = 55/515 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+   + L  + E V   TA  +   A   + QL H   
Sbjct: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQ-LPDIAEMVDMDTANAILEEAAKISAQLIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + + V     + A+  +    G      +  F  +   +   +    +  
Sbjct: 60  RAGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGC 255
           TE + G+D+  I ++     DG Y +SG K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTRAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +     G  NG+    +++K+G + +AT  + F    G+L+G+ N     + 
Sbjct: 227 FLVPKITVNKDGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSDSDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGKQLDLAKYAQDDVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTL 472
           A +  GG GYI E  + +  R++    I  G+     +D L     G NL   ++  + L
Sbjct: 407 AQQVFGGHGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAEL 466

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           +  +    +     +    +       +A  + E+
Sbjct: 467 KAQMREFTQVDGVKIAAVCARLDALVNVAESVNEQ 501


>gi|24215842|ref|NP_713323.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656858|ref|YP_000944.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24197040|gb|AAN50341.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600094|gb|AAS69581.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 418

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 124/374 (33%), Gaps = 25/374 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           WD+   HP    L+ R   + G++       +         +           L      
Sbjct: 63  WDEENKHPE--ELINRMRKELGVNGLTIPEEYGGWGLGSVEQCLVTEELSRGCLGISLCF 120

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +      +    +    K W   +   EY              +   L+E   G+D+ 
Sbjct: 121 GYTGLGILPILKGASHEQKKKWLQPVVDGEY-------------GVSFCLSEPGAGSDVP 167

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +++   K  D        +W      + A+ + A  +   G   V          GL  
Sbjct: 168 GMSTTAVKKGDKWVINGTKQWITGGGSAGAYTVFAYTDKGRGTRGVSCFYVKRDTPGLTV 227

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + ++K+G R++ T ++ F +       ++G  N+                A M V   +
Sbjct: 228 GKKEDKLGIRASDTRQIIFEDCAVEEANMIGKENLGFIYALQTLNASRPYVAAMGVGVAQ 287

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  YAR+R   G  +     ++  +AD+++ +  +  +++  A   D    R   
Sbjct: 288 AALDYASKYARQREQFGSKISSFQAVQHMLADMSIGLETSRQVTYLAARMSDADDPR--- 344

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  + I K    + A     +A++  GG GY +E  + +  R++    I  G+   
Sbjct: 345 ---LPKYSAIAKAHASETAMKCALDAVQIFGGYGYTKEYPVEKLMRDAKILCIFEGTTQI 401

Query: 450 MVLDVLNLLEKGTN 463
              ++   + +   
Sbjct: 402 QKNEIAAYVIREAA 415


>gi|330985307|gb|EGH83410.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 387

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ + +     +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F N        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDNVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|297616691|ref|YP_003701850.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144528|gb|ADI01285.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 382

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 159/382 (41%), Gaps = 39/382 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD  +  P     +++    GL        +        H  +   +  +A+ +A
Sbjct: 26  PYAQEWDAKDEFP--WECVKKMQEVGLMNIGVPAEYGGPGLD--HVAQNLVVEEIARGDA 81

Query: 149 GHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G   +    ++ +A  V +  T    K W  +                  V     LTE 
Sbjct: 82  GICTTMAASTLLAADPVLIAATDEQKKWWYGRELEG--------------VIGAFCLTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A ++++ QK+ D  Y L+G K F+S+  ++  + + A ++ ++G   +   + D
Sbjct: 128 GAGSDVAGLSTRCQKVGDE-YILNGTKQFISNGGVAGQYTVFATLDKKLGHKGICAFMVD 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM 323
               G+   + ++K+G RS+ T ++ F +        L       +  KI +  LD +  
Sbjct: 187 RDTPGISVGKKEDKLGIRSSNTTQVIFEDVKVPAKNMLGKEG---DGFKIAMKTLDISRA 243

Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            V+ M + +A+A     + YA  R   G  +I    ++  +AD+A  I A   L    + 
Sbjct: 244 CVAAMALGVAQAAFEVSVKYAMERQQFGKPIISFQAIQFMLADMAQLIEAGRLLYLEASC 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+    ++ A+ A+        +C  +A  V  +A++  GG GY +E  + +++R++ 
Sbjct: 304 KQDQGLPYTDAASLAKC-------FCGDVAMKVATDAVQIYGGYGYTKEYPVEKYFRDAK 356

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     + + N + +
Sbjct: 357 IMQIFEGTAQVQRIVIANDIIR 378


>gi|154303962|ref|XP_001552387.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10]
 gi|150854449|gb|EDN29641.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10]
          Length = 430

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 136/367 (37%), Gaps = 25/367 (6%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           + ++    G            +    QAH I    +   +        + S    + + L
Sbjct: 84  MWQKFGDAGFLGITASEDVGGLAMGYQAHCIVMEEISRASGSIGLSYAAHSQLCVNQLQL 143

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    + P +                S    L ++E   G+D+ ++ +  +K+  G
Sbjct: 144 NGNQDQKMKYMPGLIDG-------------SKIGALAMSESGAGSDVVSMRTTAKKVDGG 190

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  + P +D  ++ A+ E   G   +   L +    G    R  +K+G R +
Sbjct: 191 YVLDGTKMWITNGPDADVIVVYAKTEPEKGSKGITAFLVEKGFKGFSCARKLDKMGMRGS 250

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F   F      LG++N     + +   +  L  +   +  M+ +L  A+ +  +
Sbjct: 251 NTGELVFEGVFVPEENILGEVNRGVKVLMEGLDIERLVLSAGPLGIMQAALDVALPFTHQ 310

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPIT 400
           R   G  +    +++  +AD+   + A+ A ++  A + DE    R+++ A A +     
Sbjct: 311 RKQFGQPIAHNQLVQGKLADMYTKLQASRAYTYDTARTVDETGNIRTQDCAGAIM----- 365

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A  V  + ++ +GG GY+EE   +R  R++    I  G+     + +     K
Sbjct: 366 --YAAERATEVSLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGTTEVRKVVIGRAFNK 423

Query: 461 GTNLFEQ 467
             + F  
Sbjct: 424 EYSGFSA 430


>gi|197119205|ref|YP_002139632.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197088565|gb|ACH39836.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 140/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P    L+R+    G   S     +        ++ I    +       
Sbjct: 26  PLAMQIDEEHMIPD--DLVRKMGEMGFLGSYLPEEYGGAGLDMLSYAIVVEEVSKACGSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    K W P +                 V     LTE   
Sbjct: 84  GVLISAHTSLACGPIYTFGTEEQKKKWLPDL-------------NTGKVIGCFLLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  AI +  ++  D    ++G K F+++       ++ A  +  +    V   + D  
Sbjct: 131 GSDAGAIATTYKRDGDHF-VINGSKIFITNGGYKGTGVLFATSDKNLKHKGVSAFIIDLQ 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + + K+G R + T      +    +    N+     +  KI +  L+   + +
Sbjct: 190 SPGVEILKNEKKLGIRGSYTTAFALDSVRIPV---ENLLGQEGQGFKIAMDTLNGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  + +   ++  +AD+   I  +  ++++ A   
Sbjct: 247 ASQALGIAEGAFDLALAYSKERKQFGHPICELQAIQFKLADMYAKIETSKLMTYKAACLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K+ + E+A  +++A     +  K       EA++  GG G+I +  + R YR++   
Sbjct: 307 DSKKNYTMESAMCKMLASEAATFVTK-------EAIQIHGGYGFIVDYEVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + V  LL
Sbjct: 360 EIYEGTNEVQRVVVSKLL 377


>gi|306821449|ref|ZP_07455053.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550524|gb|EFM38511.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 377

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 143/377 (37%), Gaps = 34/377 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           +  D+V   P    ++ + +      +I  + +        ++ I    +         +
Sbjct: 27  DEVDEVGSLP--KEVIAKLVRHKFISTIIPKEYGGAGADYVSYTIVMEEISRRCASTGTY 84

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + S   A  +    T    + +               P+ +       GLTE   G+D
Sbjct: 85  ITAASSLVALPLVNFGTKEQKEKYL-------------RPLAEGKYIGCFGLTEPGAGSD 131

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
             A  +      D  Y L+G K F+++ P+ D  I+ A  +   G   +   + +    G
Sbjct: 132 AGAGQTIAIDKGD-YYELNGRKCFITNAPICDFAIISAMTDKSKGTKGISTFIVESKWEG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
             +   +NK+G R   T ++   N         N+     +  KI++  LD   + V+  
Sbjct: 191 FSHGAHENKMGIRGTETSDIILENVKVP---KENLLGKVGQGFKIMLNTLDYGRIGVAAQ 247

Query: 329 RV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +L EAI Y + R      L      +  IAD+A  + AA  L +  A   D  
Sbjct: 248 ALGVAQGALDEAIKYVKERVQFNKPLAKFQNTQFTIADMATKVQAARLLVYDAAEKKDNG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    E+A A       KY+  ++A  V  +A++  GG G+I++  I R YR++   SI 
Sbjct: 308 QVPGLESAMA-------KYYAAEIANEVAYKALQLHGGYGFIKDYPIERIYRDARILSIY 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 361 EGTSQVQQMVIAGHVIK 377


>gi|294501279|ref|YP_003564979.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351216|gb|ADE71545.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 137/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    + ++    G+    +   +        +  I    L       
Sbjct: 26  PNALERDRSKQFPL--DVFKKLSELGVMGLPFPEEYGGGGADTVSFAIVVEELSKACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +      + + L  T    + + P + S E                  GLTE   
Sbjct: 84  GITYSAHVSLGGAPIYLFGTKEQKEQYLPALCSGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGS 266
           G+D     ++   + DG + ++G K ++++     F+ L A      G   +  ++    
Sbjct: 131 GSDAGGTETEAV-LKDGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEISAIIVPTE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G        K+G  ++ T EL   +        L V     +    L+ LD   + + 
Sbjct: 190 ARGFTVIDNYEKMGLHASNTTELVLEDVEVPEENLLGVRGEGFKQF--LMTLDGGRIGIG 247

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+A +     YA+ R   G  +     ++  +AD+A+ I  A  + ++ A   D
Sbjct: 248 AMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAMKIELARNMVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K  ++EAA         K +  ++   V ++A++  GG GY++E  + R+ R++    
Sbjct: 308 QGKPFTKEAAM-------CKLYASEICMEVASQAVQIHGGYGYMKEYHVERYLRDAKLLE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   +
Sbjct: 361 IGEGTSEIQRSVIARQI 377


>gi|330953385|gb|EGH53645.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 387

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA   + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|295706626|ref|YP_003599701.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804285|gb|ADF41351.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 136/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    + ++    G+    +   +        +  I    L       
Sbjct: 26  PNALERDRSKQFPL--DVFKKLGELGVMGLPFPEEYGGGGADTVSFAIVVEELSKACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +      + + L  T    + + P + S E                  GLTE   
Sbjct: 84  GITYSAHVSLGGAPIYLFGTKEQKEQYLPALCSGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGS 266
           G+D     ++     DG + ++G K ++++     F+ L A      G   +  ++    
Sbjct: 131 GSDAGGTETEAVLN-DGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEISAIIVPTE 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G        K+G  ++ T EL   +        L V     +    L+ LD   + + 
Sbjct: 190 ARGFTVIDNYEKMGLHASNTTELVLEDVEVPEENLLGVRGEGFKQF--LMTLDGGRIGIG 247

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+A +     YA+ R   G  +     ++  +AD+A+ I  A  + ++ A   D
Sbjct: 248 AMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAMKIELARNMVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K  ++EAA         K +  ++   V ++A++  GG GY++E  + R+ R++    
Sbjct: 308 QGKPFTKEAAM-------CKLYASEICMEVASQAVQIHGGYGYMKEYHVERYLRDAKLLE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   +
Sbjct: 361 IGEGTSEIQRSVIARQI 377


>gi|163940314|ref|YP_001645198.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229011799|ref|ZP_04168980.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|229133623|ref|ZP_04262450.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|163862511|gb|ABY43570.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228650023|gb|EEL06031.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228749430|gb|EEL99274.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 381

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTLSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKFL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAINGFEDNGKKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKPISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + R+ R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERYIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|307243631|ref|ZP_07525774.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM
           17678]
 gi|306493000|gb|EFM65010.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM
           17678]
          Length = 380

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 126/361 (34%), Gaps = 24/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
              + +       C I  + +                   A      ++ + +   A  +
Sbjct: 40  QEFIDKLARYKFSCPIVPKEYGGAGADYVSYALIMEELSRADASCGTYVTAGASLVALPL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+   ++    GLTE   G+D  A  +      
Sbjct: 100 INFGTEEQKQKYLK-------------PLADGTLVGAFGLTEPGAGSDAGATQTTAVLEG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  + P  D  I+ A  E   G   +   + +    G  +   ++K+G R
Sbjct: 147 DYYILNGRKCWITNGPFCDFAIVSAVTEKGKGTRGISTFIVETKWEGFSHGAHEDKMGIR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHYA 339
              T +L F N        L    G  + M        +  A  +V   + +L EAI Y 
Sbjct: 207 GTRTSDLIFENMKIPKENLLGKLGGGFKVMMNTLEAGRIGVAAQAVGVAQSALDEAIKYT 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +      +  IAD+A  + AA  L  + A   D  +S +       +++ +
Sbjct: 267 KERVQFGKTISKFQNTQFTIADMATKVEAARLLVHQAAQLKDNKQSPA-------LLSSM 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  ++A  V  +A++  GG G++++  I R YR++   SI  G+     + +   + 
Sbjct: 320 AKYYAAEVANEVAYKALQLHGGYGFVKDYRIERIYRDARILSIYEGTSQVQQIVIAGNVL 379

Query: 460 K 460
           K
Sbjct: 380 K 380


>gi|308450853|ref|XP_003088452.1| hypothetical protein CRE_07946 [Caenorhabditis remanei]
 gi|308247223|gb|EFO91175.1| hypothetical protein CRE_07946 [Caenorhabditis remanei]
          Length = 377

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 134/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P  H  L+     G         +          + A           
Sbjct: 24  PTAAERDKTAKFP--HQELKELGELGALGMTVSDQWGGAGLDYISLVTAIEEIAAGDGAI 81

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +     ++    T +  +D+   + + ++                  LTE + 
Sbjct: 82  STIVSVQNSLPCGIIQKYGTDQQKQDYLMPLATGQW-------------LGCFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+  + Q+  D        ++  S   +   I+ A  +       +   +   + 
Sbjct: 129 GSDAGALLCKAQRDGDSWVINGTKQFITSGQHAQVAIVFAVTDKSAAKKGISCFIVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G    R+++K+G   + T  + F N         N+     E  KI +       +  A
Sbjct: 189 EGYIVSRIEDKMGQHCSDTATIVFENCRIPA---ENILGNEGEGYKIALSNLESGRIGIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   R +L  A+ YA +R   G  L+    +   +AD+A  I AA  L +  A+  D
Sbjct: 246 AQCVGMARAALDAAVEYANQRKAFGVELVQHQAVAFRLADMATQIEAARQLIYHAASLKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +  +EA+ A       K +  ++A  V ++A++  GG GY+ +  + R YR+   + 
Sbjct: 306 AGLACLKEASMA-------KLFASEIAEKVCSDAIQIHGGYGYVADFPVERIYRDVRVSQ 358

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+ +   L +   +
Sbjct: 359 IYEGASDIQRLVIARAV 375


>gi|312131646|ref|YP_003998986.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311908192|gb|ADQ18633.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 372

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 140/371 (37%), Gaps = 32/371 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L ++    G    +   S+       Q +      +  +       +
Sbjct: 28  EWDEAQHFPV--DLFKKMGQYGFMGIVIPESYGGAGLSYQEYITILDEISKVCGSIGLSV 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +         + + P++ S E+                 GLTE   G+D 
Sbjct: 86  AAHNSLCTNHIYSFANEDQKRFYLPRLASGEW-------------LGAWGLTETFSGSDA 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + +  +K  D  Y L+G K F++  +S D  +++A+    +  F++     +    G 
Sbjct: 133 GGMRTVAEKDGD-YYVLNGSKNFITHAISSDVAVVIARTGKEMSAFII-----EKGTPGF 186

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              + +NK+G R++ T  L F N        +GD          +     +  A +S+  
Sbjct: 187 SAGKKENKLGMRASETACLFFDNCRVHKDQRIGDEGTGFKQALQLLDGGRISIAALSLGI 246

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A+ YA+ R   G  + D   +   +A++A  I AA  L  + A+  D      
Sbjct: 247 ARGAYECALKYAKEREQFGKPIFDFQAISFKLAEMATKIEAAELLCRQAAHFKDNGGGNV 306

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            +A        + K +  + A  V  E+++  GG GY ++    + +R+S   +I  G+ 
Sbjct: 307 SKAG------AMAKLFASETAVEVATESVQIHGGYGYTKDYPAEKFFRDSKLCTIGEGTS 360

Query: 448 NAMVLDVLNLL 458
               + +   L
Sbjct: 361 EIQKMVISRHL 371


>gi|157962602|ref|YP_001502636.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157847602|gb|ABV88101.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 385

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 149/399 (37%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++ + +A     +     P   +WD+    P    +++++   G        
Sbjct: 2   DFNLNEDQRQFSDLAQQFAAE--ELAPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +           M       +++    +  MV    +  + ++W+  + + E
Sbjct: 58  SEGGMGLSRLDSSIIFEQLSMGCTATTAMLTIHNMATWMVTSFGSETLRQEWSESLTTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A++ ++  +  D  Y +SG K F+S   +  
Sbjct: 118 -------------KLASYCLTEPGAGSDAASLQTKAIREGDE-YVISGSKVFISGAGATE 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +  ++      G+ Y + ++K+G  +  T E+ F N    +   L
Sbjct: 164 LLVVMCRTGEAGPKGISAIVVPADAAGVIYGKAEDKMGWNAQPTREITFENVRVPVSYLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  S+   + +L  A  Y   R   G  L     ++  +
Sbjct: 224 GEEGQGFTFAMKGLDGGRINIATCSIGTAQAALERATKYMNERKQFGKPLAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A   D+          A     + K +   +   V   A++  
Sbjct: 284 ADMATELVAARQLVRLAAFKLDQQDPE------ATAYCAMAKRFATDIGFQVCDAALQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI E  + R+ R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIREYPLERYVRDVRVHQILEGTNEIMRLIISRRL 376


>gi|260437184|ref|ZP_05791000.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876]
 gi|292810497|gb|EFF69702.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876]
          Length = 384

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 139/392 (35%), Gaps = 53/392 (13%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+ E  P     + +    G       +                  Y M   E 
Sbjct: 26  PLAQEVDETEQFPVG--TVEKMQKLGFMGIPVPQELGGQGCD-------ILTYAMCVEEL 76

Query: 149 GHLM--------SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +         + +      +    TP   + +   + + E                  
Sbjct: 77  SKVCGTTGVIVSAHTSLCVDPILTYGTPEQKEKYVRPLATGE-------------KLGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVG 254
           GLTE   GTD   + ++     D  + L+G K F+++   +D +I++A  +         
Sbjct: 124 GLTEPGAGTDAQGVQTKAVLDGDE-WVLNGSKCFITNGKYADVYIIIAVTDVVEDKKGRK 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             L    + +    G  +   + K+G R +AT EL F +     +   N+     +   I
Sbjct: 183 KKLFSAFIVEKGTPGFTFGTKEKKMGIRGSATYELIFQDCR---IPKENLLGQQGKGFPI 239

Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            ++ LD   + ++   + +AE      I Y + R   G  +  Q   +  +AD+A  + A
Sbjct: 240 AMHTLDGGRIGIAAQALGIAEGALETTIDYVKERKQFGRSIAQQQNTQFVLADLATKVEA 299

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L ++ A +    K  S EAA A       K +  ++A  V  + ++  GG GYI E 
Sbjct: 300 AQLLVYKAACTKMTQKVYSVEAAKA-------KLFAAEVAMEVTTKCVQLHGGYGYIREY 352

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     + +   L K
Sbjct: 353 DVERMMRDAKITEIYEGTSEVQRMVISADLLK 384


>gi|262376461|ref|ZP_06069690.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308600|gb|EEY89734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 384

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 135/360 (37%), Gaps = 28/360 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPRV 170
             GL        +  +      +I  A            L+ + +   +S + +  T   
Sbjct: 46  ELGLFGLTIPEEYGGLGITMEEEILVAMELGHTSAAFRSLIGTNNGIGSSGIIIDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P+  + E             +     LTE   G+D AA+ +   K  D  Y L+G
Sbjct: 106 KQKYLPRYATGE-------------IIGSFCLTEPDSGSDAAALKTSAVKDGD-YYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+    + G   +   L +    GL   ++  K+G   + T +
Sbjct: 152 TKRFITNAPRATTFTVMARTNQEIKGASGISAFLVEAGTPGLSLGKIDKKMGQHGSYTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    M++L    L  A  SV      L +A++YA  R  
Sbjct: 212 VIFDNCKVHKDQLIGGVEGIGFKTAMRVLDKGRLHIAGYSVGMAERMLEDALNYAVERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ + E       A   K + 
Sbjct: 272 FGQPIANFQLIQGMLADSKAEIYAAKCMVLDAARLRDAGQNVTTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +M   V    ++  GG+GYI E SI R YR+     +  G+     + +   + K    
Sbjct: 325 TEMCGRVADRCLQIHGGAGYISEYSIERFYRDVRLFRLYEGTTQIQQIIIAREMIKQATA 384


>gi|300778917|ref|ZP_07088775.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300504427|gb|EFK35567.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 379

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 139/372 (37%), Gaps = 30/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ +  PA    +++    GL   + D  +          + A  +  +A+++A   +  
Sbjct: 32  DRDQKFPA--EQVKKMGEMGLLGMMVDPKYGGAGMDSVSYVLA--MEEIAKVDASAAVVM 87

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV ++ + A             K  S E       P+    V     L+E   G+D  + 
Sbjct: 88  SVNNSLVCA----------GLEKFASEEQKVKYLTPLASGQVIGAFALSEPEAGSDATSQ 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +   D         W  +   +  +I++AQ +       +   + +    G     
Sbjct: 138 KTTAEDKGDYYLLNGIKNWITNGGTASYYIVIAQTDPEKKHKGINAFIVERGWEGFEVGP 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            ++K+G R + T  L F+N        +     G    M +   L+   + ++   + +A
Sbjct: 198 KEDKLGIRGSDTHSLIFNNVKVPKENRIGEDGFGFNFAMAV---LNGGRIGIASQALGIA 254

Query: 334 -----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                 A+ YA+ R      +I+   +   +AD+A  I AA  L F+ A   D  K  SE
Sbjct: 255 SGAYELALKYAKTRKAFKTEIINHQAIAFKLADMATQITAARMLCFKAACEKDAGKDISE 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A       K +  ++A     EA++  GG GY++E  + R  R++    I  G+  
Sbjct: 315 SGAMA-------KLYASQVAMDTTIEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGTSE 367

Query: 449 AMVLDVLNLLEK 460
              + +   + K
Sbjct: 368 IQKIVISRSIAK 379


>gi|254495593|ref|ZP_05108515.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254355163|gb|EET13776.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 529

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/494 (22%), Positives = 201/494 (40%), Gaps = 41/494 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  EL  LG+ V+    Q L + A  + P+   Y P G+R D++E   AW+ L + S  +
Sbjct: 5   IEPELRHLGQRVIEDIHQ-LGQEAEASPPKHVPYDPWGKRIDQIEVPAAWNELDKISAEE 63

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVH 171
            L    ++R    + R         +LYL     A +      +  +A  + L     + 
Sbjct: 64  KLIAIGYERRHGALSRIHQFV----KLYLFHPSSAIYTCPLAMTDGAARALELYADEALK 119

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K     + S                  G  +TE+ GG+D++   +  +      + LSG 
Sbjct: 120 KRAFSHLTS---------ADPTQFWTSGQWMTERTGGSDVSGTATIAKPDG-AQFRLSGV 169

Query: 232 KWFLSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           KWF S+  S   + LA +EG       +  F +     +G+ NG+   RLK+K+G R+  
Sbjct: 170 KWFTSATTSQIAMTLASIEGAPAGSKGLSLFYLELRDPNGALNGIRINRLKDKLGTRALP 229

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T EL   N    L+G        +  +  +  + +A  +V  MR ++A A  YA +R   
Sbjct: 230 TAELTLENASATLVGSAGDGVKKISSLFNITRIYNACCAVGYMRRAIALARDYANKRVAF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKY 402
           G  L    +    ++++ ++  AA  L F         +  ++   E A  R++ P+ K 
Sbjct: 290 GRPLSQHGLHLETLSNMQVEFTAAFHLVFHAVELLGKDELGEATESERAVLRLLTPLAKL 349

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-- 460
           +  K A A+++EA+E  GG+GYIE+  + +  R +   SI  G+ N + LD L  + +  
Sbjct: 350 YTAKQAIALVSEALEAFGGAGYIEDTGLPQLLRNAQVLSIWEGTTNILSLDALRAIHREN 409

Query: 461 -GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC------------KEDKGLARFLTEK 507
                   +   L+Q +           +D++               +E +  AR     
Sbjct: 410 AAGAFLADIHKRLDQIINPQLIPSKNKTQDALQTIQHYMHSMAQMSDEEQQIGARQFAFA 469

Query: 508 IALASSAAALYRAG 521
           +    +A+ L    
Sbjct: 470 MTQTYTASLLLEYA 483


>gi|254429877|ref|ZP_05043584.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196196046|gb|EDX91005.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 598

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/574 (18%), Positives = 203/574 (35%), Gaps = 70/574 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VE 98
           +L  ++          LE +   +L+   +E A+ +      L+      G  +D   V 
Sbjct: 14  VLNEVLDLDGHYASLGLEDINSELLNAFLEEGAKFSENELAPLNRSGDEEGCGFDNGVVT 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +     + +  G      D  F       +  I  + +   A          S  +
Sbjct: 74  TPKGFKEAYTKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSANWSWSMYPGLSHGA 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            + +    T      + PK+ S E+  T             + LTE   G+D+  + S+ 
Sbjct: 134 VATIEEHGTDEQKNGYLPKLTSGEWTGT-------------MCLTEPSCGSDLGILKSKA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDGS- 266
           +  +DG Y ++G K F+S+   D       I+LA++ G       +  F+VP+ L DG+ 
Sbjct: 181 EPNADGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFLTDGNG 240

Query: 267 ----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
                N +    +++K+G +++AT  + F    G+L+G  N     +        L +AI
Sbjct: 241 SVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAI 300

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT 370
             V+   +     + YA+ R                  +I  P ++R +           
Sbjct: 301 QGVAHAEIGFQGGLTYAKDRLAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKSFAEGGR 360

Query: 371 ALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL +  A   D+ K   +EAA         ++ PI K +  +         ++  GG G+
Sbjct: 361 ALVYLCAQLGDKVKLEKDEAARKEADDLMALLTPIAKAFVTEAGLEAANHGVQIYGGHGF 420

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
           I E  + ++ R++  +++  G+     LD+L   ++             + Q   ++G  
Sbjct: 421 IREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVMMTQGQALRNFTKIVHQFCEANGDN 480

Query: 482 -KVITILRDSISLCKEDKGLARFLTEKI------ALASSAAALYRAG----------MND 524
             +   L       KE   L + +  +         A+S   L  +G          M  
Sbjct: 481 ADLKEFLEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMAS 540

Query: 525 IADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           +A   LE+   D       +   RF    I+  +
Sbjct: 541 VAHAALESGAGDEDFYKAKISTARFYFKRILPRV 574


>gi|212639116|ref|YP_002315636.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560596|gb|ACJ33651.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 556

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/531 (21%), Positives = 224/531 (42%), Gaps = 51/531 (9%)

Query: 40  DSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           D  L A +  +            LE   +  ++   +          P+L  Y   G   
Sbjct: 8   DPNLFANLKKYLDEEFYAYAEEELEKFWKLCMTDIDRRAVHTDREGQPRLLKYDRFGNDV 67

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V  +  +   ++ +   G+   +  +    + R   +    A+ YL++Q+E G     
Sbjct: 68  SEVWVNEGYKQTVKETYETGIVGYL-HKPIPALDRVGNYVYSYAQGYLLSQVEPGFYCPV 126

Query: 155 S--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +  + +A ++       +   + P + S       +             LTE++GG+D+ 
Sbjct: 127 TLTMATAYVLEHFADEEIKAKYLPHVISTGEVELYEGATF---------LTERQGGSDVG 177

Query: 213 AITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDG 265
           A   +     D  Y + G K+F  ++ M    ++LA+++G       +  FLVP   EDG
Sbjct: 178 ANEVRAVLCGDH-YEIYGEKYFASNAGMCGVALVLARIDGSEAGTKGLSLFLVPWRNEDG 236

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + NG+  +RLK+K+G R+  + E+ F     +L+GD       + +   L  + +A+ S+
Sbjct: 237 TLNGIHIRRLKDKLGVRAVPSAEVVFEGAKAYLIGDAKKGFYYMMEALNLSRVCNAVASI 296

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+ +L EA  YA  R   G  L   P++K  +A++       T+  F L + FD    
Sbjct: 297 GIMKRALEEAKQYAVNRQAFGHPLTSYPMVKETLANLTARQEVQTSACFELISFFDRVMR 356

Query: 386 RSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +++A     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R++   
Sbjct: 357 TADQASEQEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNGYIEDFVTPRLLRDAQVL 416

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--------------SGKKVITI 486
           ++  G+ N + L+VL L+ K   + E    T+ + L +                 ++I  
Sbjct: 417 TVWEGTANILGLEVLRLIRK-YRVHETFIQTINEQLAALPVGIRAFAKPVESGLHELIQS 475

Query: 487 LRDSISLCKEDK-GLARFLTEKIA-LASSAAALYRAGMND----IADVFLE 531
           L+      ++ +   A+ +  ++  L  S  AL  A  ++    IA +FL+
Sbjct: 476 LKQLHGQPEDVQTYHAKKIANRLCDLYLSVIALKEAEESERKQIIARLFLQ 526


>gi|92118071|ref|YP_577800.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91800965|gb|ABE63340.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 381

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 143/382 (37%), Gaps = 25/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ ++ P    ++R +   G+               +             
Sbjct: 22  EKIAPFALKWDEDKYFPV--EVMREAAGLGIGGITIRDDVGGSALSRFDAALIFEALAQG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+    +    + W PK+ +               +     LTE
Sbjct: 80  CPTVSSFISIHNMASWMIDAYGSDEQRRKWLPKLCAM-------------DLLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L G K F+S   +    ++    G  G   +  L+ +
Sbjct: 127 PGAGSDAAALRTRAVRDGDH-YMLDGQKQFISGAGASDLYVVMVRTGGDGPGGISTLVVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T  + F N    +   LGD  +             L+ +
Sbjct: 186 RDTPGVSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIS 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +A+ Y + R   G  L +   ++  +AD+A ++ AA    +R A + D
Sbjct: 246 ACSLGGAQSALDKALAYMKERKAFGKRLDEFQALQFKVADMATELEAARTFLWRAACALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E   A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 306 R------EDTDATMLCAMAKRFATDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           IL G+   M L V   L +G  
Sbjct: 360 ILEGTNEIMRLIVSRKLIEGAR 381


>gi|303319953|ref|XP_003069976.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240109662|gb|EER27831.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 430

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 131/360 (36%), Gaps = 17/360 (4%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + ++    G      D  +  +    QAH I    +   +        + S    + ++
Sbjct: 81  EMWQKLGEAGFLGVTADEQYGGLSMGYQAHCIVLEEISRASGSIGLSYAAHSQLCVNQLS 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P + S E                 L ++E   G+D+ ++ +  + +  
Sbjct: 141 LNGTPEQKAKYLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKAVDG 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  + P +D  ++ A+ E   G   +   + + S  G    R  +K+G R 
Sbjct: 188 GYILNGTKMWITNGPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRG 247

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F + F     +LG +N     + +   L  L  +   +  M+ +L   + Y  
Sbjct: 248 SNTGELIFEDVFVPKENILGTVNRGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTH 307

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   +A + A ++  A   D + +  E            
Sbjct: 308 TRKQFNAPIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGA 367

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 368 ILYAAERATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 427


>gi|224106760|ref|XP_002314277.1| predicted protein [Populus trichocarpa]
 gi|222850685|gb|EEE88232.1| predicted protein [Populus trichocarpa]
          Length = 420

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 135/376 (35%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+  + P    L +      LH     +      +    H +    +   +   
Sbjct: 64  PHASTIDQSNYFPKEVNLWKLMGDFNLHGITAPEEYGGLGLGYLYHCVAMEEISRASGSV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +     P   + + PK+ S E+                L ++E   
Sbjct: 124 GLSYGAHSNLCINQLVRNGNPAQRQKYLPKLISGEH-------------VGALAMSEPNA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++  G        W  + P++   ++ A+     G   +   + +   
Sbjct: 171 GSDVVSMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTNVTAGSKGITAFIIEKGM 230

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N F      L      V  M     L  L  A   
Sbjct: 231 PGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGP 290

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R+R   G  + +   ++  IAD+   + ++ +  + +A   D  +
Sbjct: 291 LGIMQACLDVVLPYIRQREQFGHPIGEFQFIQGKIADMYTSLQSSRSYVYSVARDCDSGR 350

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++ A   + A        + A  V  +A++C+GG+GY+ E S  R  R++    I  
Sbjct: 351 IDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNEYSTGRLLRDAKLYEIGA 403

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 404 GTSEIRRMIIGRELFK 419


>gi|115372660|ref|ZP_01459967.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|310823814|ref|YP_003956172.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115370381|gb|EAU69309.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396886|gb|ADO74345.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 378

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 77/402 (19%), Positives = 160/402 (39%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS + + L   A     ++    P     D+    P   A +  +   GL      +
Sbjct: 2   DFQLSDSQRALQETARKYAREVVR--PKAAHHDETAEFP--KAQIATAHELGLINMAIPQ 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +  +      ++                +  +  +   + L  T    +          
Sbjct: 58  EYNGLGLSHLEQVIVCEELSWGDASVATTIVANDLANLPIILAGTSDQKRRLL------- 110

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                 +P  +        LTE   G+D+A +++  +   D  Y L+G K F+++   ++
Sbjct: 111 ------SPFTEKLKFASFCLTEPGAGSDVAGLSTTARLDGDH-YVLNGSKCFITNGTYAE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            + + A V+       +   + +G P GL   + +NK+G R++ TV L F +    +   
Sbjct: 164 QYTVFATVDKDRKHKGISCFVVEGQPPGLTIGKHENKMGQRASNTVTLTFEDVRVPVANR 223

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +     G +  M+ L      +A+ SV   R +L  ++ Y+ +R   G  + +   ++  
Sbjct: 224 IGEEGQGFLIAMETLDNSRPLTAMFSVGIARAALEHSLEYSSQRRTFGKAIREHQGVQFM 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ ++I AA  L+++ A   DE +  +  ++YA+        +   MA  V  +A++ 
Sbjct: 284 LADMGMNIQAARLLTYQSALLLDEGQKNTLISSYAKC-------FAADMAMKVTTDAVQV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GYI+E  + +  R++    I  G+     L +   L K
Sbjct: 337 YGGYGYIKEYPVEKLMRDAKLIQIYEGTSQVQRLVIARELFK 378


>gi|138895000|ref|YP_001125453.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266513|gb|ABO66708.1| Probable acyl-CoA dehydrogenase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 569

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/518 (21%), Positives = 215/518 (41%), Gaps = 41/518 (7%)

Query: 38  SSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
            +D  L+A +  +          +++E   E+ L+   +          P+L  Y   G 
Sbjct: 16  EADPNLLANLKRYLDDELYQYAEEKIESFYEFCLTEVDRRAVHTDREGQPRLMKYDRFGN 75

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
              +V  +  +    +++   G+   +  +    + ++  +    A+ Y+++Q E G   
Sbjct: 76  DISEVWVNEGYEQTAKQTYETGIVGYV-HKPIPELGKQGNYIYSYAQGYILSQAEPGFYC 134

Query: 153 SPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +  + +A ++       +   + P + S       +             LTE++GG+D
Sbjct: 135 PVTLTMATAYVLEHFADHELKTRYLPHVISTGEIELYEGATF---------LTERQGGSD 185

Query: 211 IAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRLLE 263
           + A   +     D  Y L G K+F  ++      ++LA+++G       +  FLVP   E
Sbjct: 186 VGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSLFLVPWRNE 244

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ NG+  +RLK+K+G R+  + E+ F     +++GD       + +   L  + +AI 
Sbjct: 245 DGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNLSRVCNAIA 304

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV  M+ +L EA  YA RR   G  L D P+++  +AD+       T+  F +   FD  
Sbjct: 305 SVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFEMVALFDRV 364

Query: 384 KSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +   EA     A+ R++  + K    + A A   EA+E  GG+GYIE+    R  R++ 
Sbjct: 365 MTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVTPRLLRDAQ 424

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
             ++  G+ N + L+VL L+ K           + +   +  K  +  + D + L     
Sbjct: 425 VLTVWEGTANILALEVLRLMRK---------YRIHERFAAEMKARLERVADEMKLLARPV 475

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +GL   +     L   A  +       +A+   +   
Sbjct: 476 AEGLKELVAALARLGGQAEEVQTFHAKTVANRMCDVYL 513


>gi|167034658|ref|YP_001669889.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166861146|gb|ABY99553.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 387

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V  +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDDVQVPAENILGQLNGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|229097074|ref|ZP_04228041.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|229103134|ref|ZP_04233821.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|229116036|ref|ZP_04245430.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228667431|gb|EEL22879.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228680323|gb|EEL34513.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228686360|gb|EEL40271.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 381

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|149182032|ref|ZP_01860518.1| butyryl-CoA dehydrogenase [Bacillus sp. SG-1]
 gi|148850297|gb|EDL64461.1| butyryl-CoA dehydrogenase [Bacillus sp. SG-1]
          Length = 380

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 137/379 (36%), Gaps = 35/379 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  P      ++    G+    +   +                   A    
Sbjct: 26  PGALERDRTKEFP--KEAFKKLADLGMMGLPFPEEYGGAGGDTVSFAIVTEELSKACAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  ++     + +  T      +   I + E                  GLTE   
Sbjct: 84  GITYSAHISLGGAPINMFGTEEQKHKYLTPICTGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D     +   K  D  Y ++G+K F+++      + L  +  R   G   +  ++   
Sbjct: 131 GSDAGGTQTTAVKEGDE-YVINGNKSFITNASYAKHLALTAITNRSEDGSKEISAIIVPT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G        K+G  ++ T EL   N       + N+     E  K  +  LD   + 
Sbjct: 190 DAEGFTVVDNYEKMGLNASNTTELVLENVRVP---EENLLGKKGEGFKQFLSTLDGGRIG 246

Query: 325 VSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  M + +AEA     + Y++ R   G  L    V +  +AD+A+ I  A  + F+ A  
Sbjct: 247 IGAMALGIAEAAFEKALQYSKERKQFGRPLSQFQVTQFKLADMAMKIELARNMIFKAAWL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ +  ++EA+         K +  ++A  +  EA++  GG GY++E  + R+ R++  
Sbjct: 307 KDQGRPFAKEASM-------CKLYASEVAMEIADEAIQIHGGYGYMKEYEVERYMRDAKL 359

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  L+
Sbjct: 360 LEIGEGTSEVQRMVISRLI 378


>gi|157140168|ref|XP_001647622.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108866505|gb|EAT32290.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 378

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 136/392 (34%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     Q     P    WDK    PA    L+     G         +      
Sbjct: 7   QEMIRDAMRAFAQ-ERLAPFAAEWDKHHTFPA--QALKELGELGAMGMCVPEEWGGAGMD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
               +               ++S   + A  +     T +  ++W               
Sbjct: 64  YMSLVLTLEEIAAGDGATSTIVSVQNSLACGITQKYGTDQQKEEWLK------------- 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +        LTE   G+D  AIT++  +  D        ++  +   +   I+ A  
Sbjct: 111 PLARGEKLGCFCLTEPHTGSDAGAITTRADRDGDSFVLNGVKQFITTGKHAHMAIVFAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           +   G   +   L   +  G    R ++K+G  ++ TV++   N       LLG      
Sbjct: 171 DKAAGKKGISCFLVPTATPGFIVGRTEDKMGQHASDTVQIILENCRVPASSLLGKEGEGY 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +  A  S+   R +   A+ YA+ R   G  +I+   +   +AD+   +
Sbjct: 231 RIALSNLEAGRIGIAAQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A   + +R A   D  K   +EA+ A++       +  + A  + ++A++  GG GY  
Sbjct: 291 DAGRLMVWRAAQLKDAGKPCLKEASMAKM-------FASEAAEKIASDAIQIHGGVGYTS 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+   + I  G+ +   L +   +
Sbjct: 344 DFPVERIYRDVRISQIYEGANDIQRLVIGRSI 375


>gi|118477942|ref|YP_895093.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|118417167|gb|ABK85586.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
          Length = 385

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 35  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 92

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 93  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 139

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 140 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 198

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 199 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 259 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 318

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 319 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 371

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 372 EIQRLVIARHL 382


>gi|119183636|ref|XP_001242828.1| hypothetical protein CIMG_06724 [Coccidioides immitis RS]
          Length = 430

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 131/360 (36%), Gaps = 17/360 (4%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + ++    G      D  +  +    QAH I    +   +        + S    + ++
Sbjct: 81  EMWQKLGEAGFLGVTADEQYGGLSLGYQAHCIVLEEISRASGSIGLSYAAHSQLCVNQLS 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P + S E                 L ++E   G+D+ ++ +  + +  
Sbjct: 141 LNGTPEQKAKYLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKAVDG 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  + P +D  ++ A+ E   G   +   + + S  G    R  +K+G R 
Sbjct: 188 GYILNGTKMWITNGPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRG 247

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F + F     +LG +N     + +   L  L  +   +  M+ +L   + Y  
Sbjct: 248 SNTGELIFEDVFVPKENILGAVNRGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTH 307

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   +A + A ++  A   D + +  E            
Sbjct: 308 TRKQFNAPIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGA 367

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 368 ILYAAERATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 427


>gi|93006061|ref|YP_580498.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393739|gb|ABE75014.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 384

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 64/356 (17%), Positives = 130/356 (36%), Gaps = 26/356 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        +  +      ++  A  L   +      + + +   +S + +  T  
Sbjct: 45  RELGLFGLTIPEEYGGLGVTMEEEVTLAFELGRTSPAFRSLIGTNNGIGSSGLVIDGTEA 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E             +     LTE   G+D A++ +   K  D      
Sbjct: 105 QKQKYLPRLASGE-------------IIGSFCLTEPDSGSDAASLKTTAIKDGDTYIING 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P +  F ++A+ +        +   + +    G+   ++  K+G +   T +
Sbjct: 152 TKRYITNAPEAGVFTVMARTDPQNKRSGGISAFIVESDTPGITLGKIDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A  S       L +A+HYA  R  
Sbjct: 212 VIFDNCIVPADALIGGVEGVGFKTAMKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA ++    +   DE K    E+          K + 
Sbjct: 272 FGQPIANFQLIQAMLADSKAEIYAAKSMVLDASRLRDEGKDVVTES-------SCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +M   V   A++  GG+GYI +  I R YR+     +  G+     + +   + K
Sbjct: 325 TEMCGRVADRAVQIHGGAGYIADYGIERFYRDVRLYRLYEGTTQIQQIIIARNMIK 380


>gi|229076818|ref|ZP_04209728.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|228706307|gb|EEL58570.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 371

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 21  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 78

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 79  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 125

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 126 GTQTKAVLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEENGRKRISAFIVPTTSEGL 184

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 185 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 244

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 245 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 304

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 305 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 357

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 358 EIQRLVIARHL 368


>gi|297618143|ref|YP_003703302.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145980|gb|ADI02737.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 141/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    + ++    G  C   D  +          +          + +
Sbjct: 28  PYYNEWEEKGIVP--REVYKKMGDYGFLCPWVDEKYGGAGADFLASVVINEEIGSKGVIS 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +A   T      W PK  S               + + + +TE   G
Sbjct: 86  FFSFLHSDIVAPYIASYGTEDQKARWLPKCVSG-------------DIILAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+AA+ ++  K  D  Y L+G K F+S+ + +D  ++ A+ +   G   V   L +   
Sbjct: 133 SDLAAMRTRAVKDGDH-YILNGSKTFISNGILADLVVVAAKTDPAAGAKGVSLFLVERDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G    R   KIG  +  T EL F +        L     G +  M+ L    L +AI++
Sbjct: 192 PGFIRSRQIPKIGLHAQDTAELFFEDCRVPASNLLGKEGNGFIYLMQKLQQERLLAAIVN 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V+     L   + Y ++RH+ G  L      +  +A+IA +I  A      L       K
Sbjct: 252 VTLAERCLKLTLDYVKQRHLFGKPLSSFQNTQFVLAEIATEIQLARGFVDTLVLHHMAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E + A       KYW C+M+  V    ++  GG GY  E  I+R + ++   SI  
Sbjct: 312 DVVQEVSMA-------KYWVCEMSHRVANRCVQLFGGYGYCTEYEISRLWADTRVQSIYA 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L +   L
Sbjct: 365 GTSEVMKLIIARGL 378


>gi|85112132|ref|XP_964284.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28926060|gb|EAA35048.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 482

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 143/365 (39%), Gaps = 29/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           + +     GL     D ++  +    QAH +    L   +   A    + S    + ++L
Sbjct: 129 MWQALGDAGLLGITADEAYGGLSMGYQAHCVVMEELSRASGSIALSYAAHSQLCVNQLSL 188

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + P + S E                 L ++E   G+D+ ++ +  +K+  G
Sbjct: 189 NGNAEQKEKYLPGLISGE-------------KVGALAMSESGSGSDVVSMRTTAKKVEGG 235

Query: 225 IYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-----PNGLCYQRLKNK 278
            Y L+G   W  + P +D  ++ A+ E   G   +   + +         G    R  +K
Sbjct: 236 GYKLNGSKMWITNGPDADVIVVYAKTEPDAGSKGITAFIVETKKDGVKAEGFECLRKLDK 295

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R + T EL F N F     +LG +N     + +   L  L  +   +  M+ +L  A
Sbjct: 296 MGMRGSNTGELVFENVFVPEENVLGKVNGGVRVLMEGLDLERLVLSAGPLGLMQAALDVA 355

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  +    +++  +AD+   + A+ A ++  A + D      E+      
Sbjct: 356 LPYAHSRKQFGTPIAHFQLLQGKLADMYTKLQASRAYTYATAKTVD------EQGVIKTQ 409

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  +  + A  V  +A++ +GG GY+EE  ++R  R++    I  G+     + + 
Sbjct: 410 DCAGAILYAAERATEVALDAIQILGGMGYMEEMPVSRIMRDAKLYEIGAGTSEVRRMVIG 469

Query: 456 NLLEK 460
            +  K
Sbjct: 470 RVFNK 474


>gi|221234349|ref|YP_002516785.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|220963521|gb|ACL94877.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 381

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 141/375 (37%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    +LR++   G      +         +              +  
Sbjct: 28  PHSADWDENKHFPV--DVLRQAAELGFAGIYVNEDVGGSGLSRLDASIIFEALSYGDVPV 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    ++ M+    +  + + + P++ + E             +     LTE   G
Sbjct: 86  AAYLTIHNMASWMIDRFGSDDLRQRYLPRLTTME-------------LIASYCLTEPGSG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +  +   D      G  +     +SD ++++A+  G  G   V   + +    
Sbjct: 133 SDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGE-GAKGVSAFVVEKGME 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           GL +   + K+G  +  T ++ F N    +   +     G    M  L    L+ A  S+
Sbjct: 192 GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGGRLNIASCSL 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L  A  Y   R+  G  L D   ++  +AD+A ++ AA  +  R A++ D    
Sbjct: 252 GGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRAAHALDSKHP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A  +  + K +       V  +A++  GG GY+++  + R  R+   + IL G
Sbjct: 312 E------ATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQILEG 365

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   + +
Sbjct: 366 TNEIMRVIIAREMFR 380


>gi|17545192|ref|NP_518594.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427483|emb|CAD14001.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 595

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 92/486 (18%), Positives = 180/486 (37%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFKEAYKQYVEGG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  F          +  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPALGCDPEFGGQGLPI--LVNNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTRAEPLADGAYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDAAGNPGERNGVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   +  +    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +I  P ++R +           A ++ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDREL 376

Query: 385 SRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S  +E      A    ++ P+ K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   I++D +     ++
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGAKMKKFGKIVQDFVEAEGTNE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFV 489


>gi|330982171|gb|EGH80274.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 387

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA   + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +      + P++ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSSEQKARYLPRLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  E ++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALETIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|48478468|ref|YP_024174.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus
           DSM 9790]
 gi|48431116|gb|AAT43981.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus
           DSM 9790]
          Length = 377

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 149/380 (39%), Gaps = 35/380 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+  + P    +++     GL  S   + +          +        A    
Sbjct: 23  PRAREIDEKMYVPE--DIIQGMRDMGLFASYIPKEYNGYGLGFKFLMNVIEEISKACPST 80

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++  ++T  A  V +  +  + K + P++ S E                GL +TE   
Sbjct: 81  ALVLDGALTLFAEPVIMFGSEDLKKRYLPRVASGE--------------VGGLAITEPGA 126

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A+I +   +  +  Y L+G K F+S+  ++  F++ A  +       +   + D  
Sbjct: 127 GSDAASIKTTAVRSGN-KYVLNGTKVFISNGRLARFFVVDASTDPERRAKGITSFVVDAD 185

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSV 325
             GL   R  +K+G R ++TVEL F N       + N+     E  K I+  LD+  + +
Sbjct: 186 APGLKISRDIHKLGIRGSSTVELVFDNVEVP---EENIIGNVNEGFKVIMDTLDAGRIGI 242

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A     EA+ Y + R      +ID   ++  IAD+   I A+  L +  A  +
Sbjct: 243 AAQALGIAKASFEEALKYIKERKQFNQRIIDFEGVQFMIADMETRIKASELLVYDAAEKW 302

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              ++  E       ++ I K +    A  V   +++  GG GY  +    RH R++   
Sbjct: 303 QNHENTIE-------ISSIAKMYASDTAMYVAERSLQLFGGYGYTTDFDAERHLRDAKIT 355

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   + K
Sbjct: 356 QIYEGTNEIQKIIIAREIMK 375


>gi|225864526|ref|YP_002749904.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|229184774|ref|ZP_04311967.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|225790484|gb|ACO30701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|228598678|gb|EEK56305.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 381

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|167623980|ref|YP_001674274.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354002|gb|ABZ76615.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 586

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/485 (19%), Positives = 188/485 (38%), Gaps = 55/485 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y++       L+  + + P++   E+  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYNAPLAEMRFLLEKVFDAPNIWS-EMPAMAESVDMDTAVAILDEADKISRELIHPIN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G         DKV     + A+  +    G      D  F  +   +   +    +  
Sbjct: 60  RSGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             A  +G+
Sbjct: 120 SACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEW-------------AGAMGM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--EGRVGC 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  D     G  NG+    +++K+G + ++T  + F +  G+L+G  N     + 
Sbjct: 227 FLVPKIKVDADNSLGDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         ++    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGASIDPILVHGDVRRML 346

Query: 360 ADIALDIAAATA------LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             I     A  A      L   LA   +++ ++++ + Y  ++ P++K +          
Sbjct: 347 LTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDRGLDAAI 406

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
            A +  GG GYI E  I +  R++    I  G+     +D L     G N+   L   + 
Sbjct: 407 MAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNV-AALSEFVA 465

Query: 474 QDLGS 478
           + + +
Sbjct: 466 EQVAN 470


>gi|315925783|ref|ZP_07921990.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620892|gb|EFV00866.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 377

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/407 (18%), Positives = 148/407 (36%), Gaps = 44/407 (10%)

Query: 63  EYVLSCTAQELARMANYN-----TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            +++S   ++L +           P +  Y   GE        P    + + ++  GLHC
Sbjct: 2   AFIVSDETRDLIQSVQVFCEQKLKPVVADYDTSGE-------FPI--KVYKDAMEMGLHC 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                +F  +                        +S    +   V +  TP   + +A  
Sbjct: 53  LEIPEAFGGLGLDNLSAAAILSKVGEYDAGFATGLSAISLALKPVLIAGTPEQKQLFADI 112

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +                 GLTE   G+D  ++T+  +   D         +  + 
Sbjct: 113 VVPGNF--------------AAFGLTEPNAGSDAGSVTTTAELDGDHYVINGRKTFITNG 158

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D +++ A V+   G   +   + +    G+   + +NK+G R + T ++ F N    
Sbjct: 159 GVADVYVVFASVDKSKGLKGLSAFIVEKKTPGISVGKEENKMGIRLSNTTDVVFDNV--- 215

Query: 298 LLGDLNVSTGPVEDMKI-LIYLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILID 351
           ++   N+     E  KI ++ LD A      ++    + ++ E I Y + R   G  +  
Sbjct: 216 VIPRANLLGKEGEGFKIAMMTLDLARPFVGAIACGIAQRAINECIAYMKERVQFGKPIAK 275

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             V++  +AD+ +   AA A+   +    D  K  S EAA       I K +    A  V
Sbjct: 276 LDVLRNKLADMEIKKEAAVAMVEHVFKMIDLGKRYSREAA-------IAKAFAGDTAVEV 328

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++  GG GY  E  + +  R++    I  G+     + +   L
Sbjct: 329 AMEAIQIHGGYGYSREYPVEKLLRDAKIFQIFEGTNEVQRVVIAGSL 375


>gi|94502143|ref|ZP_01308643.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94425714|gb|EAT10722.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 389

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 147/377 (38%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  E+ DK    P  + L ++    GL     +  +    +   AH I    +   +   
Sbjct: 33  PLAEQTDKENAFP--NQLWKKMGDMGLLGITAEEEYGGTNMGYLAHVIAMEEISRASASI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +P     + PK+ S ++                L ++E   
Sbjct: 91  GLSYGAFSNLCVNQLTKNGSPEQKAKYLPKLISGDH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D      G  W  + P +D +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLRAEQKGDKFILNGGKMWITNGPDADVYVIYAKTDFEKGPHGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +         NV  G    +K+L+  LD   + +S
Sbjct: 198 PGFSRGQKLDKLGMRGSNTCELIFEDCEVPA---ENVLGGLNNGVKVLMSGLDYERVVLS 254

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M+  +   + Y   R   G  + +  +++  IAD+   + A  +  + +A + D
Sbjct: 255 GGPTGIMQACMDVVVPYIHDRQQFGKSIGEFQLVQGKIADMYSTMNACKSYLYMVATACD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  + A  +  +A++ +GG+GYI + +  R  R++    
Sbjct: 315 RGETTRKDAAG-------VILYTAEKATQMALDAIQLLGGNGYINDFATGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|49185378|ref|YP_028630.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|165868334|ref|ZP_02212994.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167631825|ref|ZP_02390152.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167637642|ref|ZP_02395921.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170685119|ref|ZP_02876343.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170704739|ref|ZP_02895205.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177649576|ref|ZP_02932578.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190565459|ref|ZP_03018379.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196040402|ref|ZP_03107703.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|227814643|ref|YP_002814652.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229122085|ref|ZP_04251301.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|254685114|ref|ZP_05148974.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254722523|ref|ZP_05184311.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254737565|ref|ZP_05195268.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743251|ref|ZP_05200936.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254751880|ref|ZP_05203917.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254760400|ref|ZP_05212424.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|301054083|ref|YP_003792294.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|49179305|gb|AAT54681.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164715060|gb|EDR20577.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167514191|gb|EDR89558.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167532123|gb|EDR94759.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170130540|gb|EDS99401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170670479|gb|EDT21218.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172084650|gb|EDT69708.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190563486|gb|EDV17451.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196028887|gb|EDX67493.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|227005728|gb|ACP15471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228661428|gb|EEL17052.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|300376252|gb|ADK05156.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 381

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGIEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|71065730|ref|YP_264457.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038715|gb|AAZ19023.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 384

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 64/356 (17%), Positives = 130/356 (36%), Gaps = 26/356 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        +  +      ++  A  L   +      + + +   +S + +  T  
Sbjct: 45  RELGLFGLTIPEEYGGLGVTMEEEVTLAFELGRTSPAFRSLIGTNNGIGSSGLVIDGTEA 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E             +     LTE   G+D A++ +   K  D      
Sbjct: 105 QKQKYLPRLASGE-------------IIGSFCLTEPDSGSDAASLKTTAIKDGDTYIING 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P +  F ++A+ +        +   + +    G+   ++  K+G +   T +
Sbjct: 152 TKRYITNAPEAGVFTVMARTDPQNKRSGGISAFIVESDTPGITLGKIDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A  S       L +A+HYA  R  
Sbjct: 212 VIFDNCVVPADALIGGVEGVGFKTAMKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA ++    +   DE K    E+          K + 
Sbjct: 272 FGQPIANFQLIQAMLADSKAEIYAAKSMVLDASRLRDEGKDVVTES-------SCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +M   V   A++  GG+GYI +  I R YR+     +  G+     + +   + K
Sbjct: 325 TEMCGRVADRAVQIHGGAGYIADYGIERFYRDVRLYRLYEGTTQIQQIIIARNMIK 380


>gi|78222924|ref|YP_384671.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194179|gb|ABB31946.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 379

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 136/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P   +L+R+    G   S     +        ++ I    +       
Sbjct: 26  PVAVQIDEEHMIPD--SLVRKMGEMGFMGSYLPEQYGGAGLDMLSYSIVVEEVSKACGSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    K W P + S E                   LTE   
Sbjct: 84  GVLISAHTSLACGPIYTFGTEEQKKKWLPALNSGE-------------TIGCFLLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  AI +  ++  D         +  +       ++ A  +  +    V   + D   
Sbjct: 131 GSDAGAIATTYRREGDEFVINGSKIFITNGGYRGTGVLFATSDKSLKHKGVSAFIIDLRS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           +G+   + + K+G R + T      N         N+     +  KI +  L+   + ++
Sbjct: 191 HGVEILKNEKKLGIRGSYTTAFALDNVRIPA---ENLLGQEGQGFKIAMDTLNGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE     A+ Y++ R   G  + D   ++  +AD+   I  +  ++++ A   D
Sbjct: 248 SQALGIAEGAFERALAYSKERKQFGAPICDLQAIQFKLADMWAKIETSKLMTYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ + E+A  +++A     +  K       EA++  GG G+I +  + R YR++    
Sbjct: 308 HKKNYTMESAMCKMLASEAATYVTK-------EAIQIHGGYGFICDYEVERMYRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +  LL
Sbjct: 361 IYEGTNEVQRVVISKLL 377


>gi|313680608|ref|YP_004058347.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313153323|gb|ADR37174.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 384

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 145/405 (35%), Gaps = 32/405 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++L ++A     +  A  P    +D+ E  P    L+ +    GL       
Sbjct: 4   DFSLTDEQKQLQQLARRFAREQVA--PRAAEYDQSEKVP--WELVEQLYEIGLLNISVPE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +      ++        A +    +   S    + + +  T    K +        
Sbjct: 60  EAGGLGLGLVEEVIIGEELGWADMGFYTIPMASELGITPILIAGTEEQKKRFL------- 112

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        L+E   G+D AA+ ++  +  D         W  ++  +D 
Sbjct: 113 ------GPLAERPSLAAFALSEPGNGSDAAALRTRIVREGDEYVITGTKMWISNAKEADF 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A  +  +    V  ++ +    G+ + ++  K+G R+  T E+ +      +    
Sbjct: 167 NVVFATFDPALRHKGVIAIVVENDREGVSFNKIHGKMGQRAAPTYEIVYDGVRVPV---E 223

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      E  KI +       +  A  SV   R +L E+  YA  R   G  + D   ++
Sbjct: 224 NRLGEEGEGFKIAMLTLDKTRIPVAAGSVGVARRALDESAKYALEREAFGRPIADFQAIQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++ + +  A   ++  A   D+       A+       I K +  ++A     +A+
Sbjct: 284 FKLAEMKMGLETARMYTYYAAWLADQNDPEHISAS------AIAKAYASEVAFEAANQAI 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG GY+ +  + +  R+   N I  G+     + +   + K 
Sbjct: 338 QIHGGYGYVNDFPVEKLLRDVKLNQIYEGTNEIQRIIIARNILKA 382


>gi|240143298|ref|ZP_04741899.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
 gi|257204776|gb|EEV03061.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
 gi|291536834|emb|CBL09946.1| Acyl-CoA dehydrogenases [Roseburia intestinalis M50/1]
          Length = 384

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 77/385 (20%), Positives = 143/385 (37%), Gaps = 39/385 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    +++    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEAFPA--ETVKKMQKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +   + + E                   LTE   
Sbjct: 84  GVVVSAHTSLCIDPIMTYGTEEQKQKYVKPLATGE-------------KLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGAQTKAVLDGDE-WVLNGSKCFITNGKVADVYIVIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + D    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD 
Sbjct: 190 IVDKGAPGFSFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGPEGKGFPIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  I AA  L ++
Sbjct: 247 GRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAARIEAAQLLVYK 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K  S EAA A       K +  + A AV  E ++  GG GYI E  + R  R
Sbjct: 307 AAMAKATQKVYSVEAAKA-------KLFAAETAMAVTTEVVQLFGGYGYIREYDVERMMR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+     + +   L K
Sbjct: 360 DAKITEIYEGTSEVQRMVISGALLK 384


>gi|160892527|ref|ZP_02073317.1| hypothetical protein CLOL250_00056 [Clostridium sp. L2-50]
 gi|119370269|gb|ABL68064.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium L2-50]
 gi|156865568|gb|EDO58999.1| hypothetical protein CLOL250_00056 [Clostridium sp. L2-50]
          Length = 388

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 136/384 (35%), Gaps = 33/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+    P     + +    G       +           + +    L  +    
Sbjct: 26  PLAQEIDENHRFP--RETVEKMAKYGFLGIPVSKEDGGQGCDPLTYVMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    TP     + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCVDPIQTYGTPDQKAKYLPDLASG-------------RKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLL 262
           GTD     ++     D  + L+G K F+++   +D +I++A      +       +   +
Sbjct: 131 GTDAQGQQTKAVLDGDE-WVLNGSKCFITNGKEADVYIIIAVTGTIEKRGRKQKEISAFI 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSA 321
            +    G  +   +NK+G   ++T EL F++        L     G    M     LD  
Sbjct: 190 VEKGTPGFTFGTKENKMGICGSSTYELIFTDCRIPKDALLGQKGKGFGIAMH---TLDGG 246

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      I Y + R   G  +      +  +AD+A  + AA  L ++ 
Sbjct: 247 RIGIAAQALGIAEGALDITIDYVKERKQFGRSIAQFQNTQFVLADLATKVEAAKLLVYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   ++ ++  + +    + A + K +  ++A  V  + ++  GG GYI+E  + R  R+
Sbjct: 307 AKKKEQYQADHKTS--YSVEAAMAKLYAAEVAMEVTTKCVQLHGGYGYIKEYDVERMMRD 364

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 365 AKITEIYEGTSEVQRMVISANLLK 388


>gi|89894314|ref|YP_517801.1| hypothetical protein DSY1568 [Desulfitobacterium hafniense Y51]
 gi|89333762|dbj|BAE83357.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 386

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 122/373 (32%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P   A   +    GL        +                   A    
Sbjct: 30  PLAPELDKSHEFPM--ATWNKMRELGLTGFPIPEEWGGGGGSYLDFAIIVEELAKACAST 87

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + S       M + L  + ++ + +  ++ + E             +     LTE   
Sbjct: 88  AVITSVHTGLGCMSMYLYGSQQLKEKYLERLATGE-------------IIGAYALTEPNA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D  A+  + +   D      G  +  +  ++  F    + +  +     +  LL +  
Sbjct: 135 GSDAGALRCKAEDRGDHFLVNGGKIFITNGTVATTFCTFVKTDPTQPKGKGITCLLIEKD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G   + TVEL F N       +LG++N        +     +     
Sbjct: 195 LPGFTISKPVEKMGMHGSPTVELIFENVKVPKENVLGEINNGFAVAMGLLAGGRITIGAQ 254

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +L   I+Y + R      L     ++  IAD+A  I AA  L +R A   D  
Sbjct: 255 GLGIAEGALDYTINYIKERQQFDKPLAANQGVQFMIADMATKIEAAQMLIYRAAWLKDHQ 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              ++EA+ A       K +   +A  V    ++ +GG GY  E  + R  R++    I 
Sbjct: 315 LPHNKEASMA-------KLFATDVAMEVTTNCVQLLGGYGYCSEYPVERMMRDAKITQIY 367

Query: 444 LGSGNAMVLDVLN 456
            GS     + +  
Sbjct: 368 EGSNQIQRMIIGR 380


>gi|188587652|ref|YP_001921196.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
 gi|188497933|gb|ACD51069.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 379

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 152/405 (37%), Gaps = 47/405 (11%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSF 124
              +E+AR    N   P++          +  EF   A+  L +     G     + + +
Sbjct: 10  EMIKEMARQFAENELKPRVLEND------ENSEFPIEAYKKLGKL----GFIGIPYPKEY 59

Query: 125 EPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + A      + A     + ++ S+ S  ++    +    K + P + S  
Sbjct: 60  GGAGGDYLSYVLAVEEISKVDASFGISYSVTTSLCSGGII-NAASEEQKKKYLPDVLSG- 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                             GLTE   G+D     +  +K  D  Y L+G K F+++  +S+
Sbjct: 118 ------------KKLGSFGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSE 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A  +   G   +   + +    G    +++NK G +S    EL F N        
Sbjct: 165 TFLVFALTDKSKGSKGLSAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENCKVPAENL 224

Query: 302 LN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVM 355
           +     G    MK    LD   + V+   + +AE        Y + R   G  L     +
Sbjct: 225 VGAEGKGFGIAMKA---LDGGRIGVAAQGLGIAEGAFDIVKQYLKDRQQFGKPLWKNQYL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A++ L+I  A  + ++ A    E ++ S  AA A       K  C  +A  V  EA
Sbjct: 282 AFKMAELELEIEKAKYILYKAAMDKQEGRTYSVSAAKA-------KLSCTDVAMKVTVEA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +GG+GY++E ++ R  R++    I  G+     L +   + +
Sbjct: 335 VQMLGGNGYMKEYNVERMMRDAKITQIYEGTNEIQKLIISGSIFR 379


>gi|163745780|ref|ZP_02153139.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex
           HEL-45]
 gi|161380525|gb|EDQ04935.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex
           HEL-45]
          Length = 593

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/529 (19%), Positives = 190/529 (35%), Gaps = 73/529 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRS 123
           +    E  ++ +     L+A     G R +  V + P  +     +    G         
Sbjct: 38  AAILDEAGKLTSEVLAPLNAVGDKEGCRLENGVVYTPKGFKEAFEKVKEGGWPGLDMPEQ 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +               ++  A          +  +AS +    T      + PK+ S E+
Sbjct: 98  YGGQNMPYVIGTAVGEMFSAANQAFTMYQGLTHGAASAILAHGTDAQKDTYLPKMVSCEW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   GTD+  + ++     DG Y +SG K F+SS   D  
Sbjct: 158 TGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSYKISGQKIFISSGEHDMA 204

Query: 243 ----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++EG       V  F+VP+ +       G  NG+    ++ K+G   N+T 
Sbjct: 205 DNIIHLVLAKIEGGPEGIKGVSLFIVPKFMVKEDGSLGERNGVSVGSIEEKMGIHGNSTC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLG  +     +  M     +   +  ++   V+   A+ YA  R     
Sbjct: 265 VMNYDGATGYLLGTEHKGMRAMFTMMNEARVGVGMQGLAQAEVAYQNAVIYANDRLQGRA 324

Query: 348 ------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
                        LI  P ++R++ D    + AA A     A   D A    ++ A    
Sbjct: 325 VTGAVAPEKAADPLIVHPDIRRSLMDQKSFVEAARAFILWGATMIDAAHRADDKDADGLV 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +       +  +A +  GG GYIEE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFLTDQGYDMTVKAQQVYGGHGYIEEWGMSQFTRDARIAQIYEGANGVQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS--LCKEDKGLARFLTEKIALA 511
           ++                L QD G        +++  I     ++ +  A FL     L 
Sbjct: 445 LVG-------------RKLAQDGGKHVMAFFDLVKGFIKDNAGQDAEFDAAFLD---PLK 488

Query: 512 SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +++  L  AGM      F++N       + +  L G  +  H+   + L
Sbjct: 489 AASKDLQSAGM-----YFMQN----GMKNPNNALAGSNDFMHMFGHVCL 528


>gi|228997544|ref|ZP_04157157.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229005167|ref|ZP_04162890.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228756142|gb|EEM05464.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228762172|gb|EEM11105.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 381

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTLSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAFLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEENGKKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIILDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDHDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|50084768|ref|YP_046278.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530744|emb|CAG68456.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 375

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 129/373 (34%), Gaps = 26/373 (6%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
               WDK    P    +L +    G    +    +          + A      A     
Sbjct: 25  NAAEWDKHSIFP--KDVLSQMGQLGFMGMLVSEKWGGSNTGNLAYVLALEEIAAADGATS 82

Query: 150 HLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS   +   + +A   T    + +               P+ +  +     LTE   G
Sbjct: 83  TIMSVHNSVGCVPIAKFGTEEQKQKYL-------------VPLAQGEMIGAFALTEPHTG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AAI ++  K  D        ++  S   +   I+ A  +   G   +   +      
Sbjct: 130 SDAAAIKTRAIKQGDEWIINGAKQFITSGHNAGVIIVFAVTDPNAGKKGLSAFIVPRETL 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R + K+G  ++ T ++  ++       +LG                 +  A  +V
Sbjct: 190 GYEVIRTEEKLGLHASDTCQIALTDVRVHHSLMLGQEGEGLKIALSNLEGGRIGIAAQAV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L EA  YA+ R   G  + +   +   +A +A +I AA  L    A   +  K 
Sbjct: 250 GLARAALEEATKYAKERVTFGKPIFEHQALAFRLASMATEIEAARQLVHYAARLKEAGKP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA+ A       K +  +M   V + A++  GG GY+++  I R YR++    I  G
Sbjct: 310 CLNEASMA-------KLFSSEMVERVCSAALQIFGGYGYLKDFPIERIYRDARICQIYEG 362

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   L
Sbjct: 363 TSDIQRLVIARSL 375


>gi|302692004|ref|XP_003035681.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8]
 gi|300109377|gb|EFJ00779.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8]
          Length = 410

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 134/372 (36%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  E  D+    P    +  +    GL        +  V      H +    +   +   
Sbjct: 53  PRAEEIDRTNTSPM--DVWEKLGDMGLLGVTVSSEYGGVELGYFQHTLAMEAISEASGSV 110

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + P + S                   L ++E   
Sbjct: 111 ALSYGAHSNLCVNQIHRHGTDAQKAKYLPDLISG-------------KKVGSLAMSETGS 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ ++  K+  G        W  + P++  F++ A+ E   G   +   + +   
Sbjct: 158 GSDVVSMRTRADKVKGGYKLNGNKFWITNGPIASTFVVYAKTEPEKGSKGITAFIVEKGT 217

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K G R + T EL F +       +LG +N     +     L  L  +   
Sbjct: 218 PGFSTHQKLDKFGMRGSDTCELVFEDCVVPEENVLGQVNRGAAVLMSGLDLERLVLSGGP 277

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +   A+ Y   R   G  + +  +M+  IAD+   + A+ +  + +A + D+ +
Sbjct: 278 LGLMQSAFDMAVEYVHDRKQFGQPVGEFQLMQAKIADMYTKLNASRSYVYAVARACDKGR 337

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               + A A         +  + A  V  EA +C GG+GYI +  I R  R+S   ++  
Sbjct: 338 ISRRDCAGA-------ILYSTEKAIEVCIEAQQCFGGNGYINDYPIGRLVRDSRLYAVGA 390

Query: 445 GSGNAMVLDVLN 456
           G+     + +  
Sbjct: 391 GTQEIRRMLIGR 402


>gi|302533278|ref|ZP_07285620.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442173|gb|EFL13989.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 390

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 80/423 (18%), Positives = 142/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           +D     +    P+   ++L  L   +     +  A                    D+ E
Sbjct: 2   TDRAPQPVDRQLPTEESRDLLALVREIAQREIRPNAA-------------------DEEE 42

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
                  +       GL    +   F    +     ++       A+L  G  +S    +
Sbjct: 43  TGRFPREVFTLLSEAGLLGLPYAGEFGGGEQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T        P +                 +     L+E   G+D A++T++ 
Sbjct: 103 CHGLAGYGTKEQQSAHLPDMLGG-------------GLLGAYCLSEPAAGSDAASLTTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D + +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGDEWVITGTKAWITHGGVADFYTVLART-GAPGAKGITAFLVPGDAPGLTAAVPEKK 208

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  ++   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRVPDSRRIGEEGQGFTIALAALDAGRLGIAACAIGVAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D  K  S +AA A  
Sbjct: 269 VSYALGRKQFGHPIADFQGLRFMLADMATKIEAGRALYLAAARLRDAGKPFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A AV  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDAAMAVTTDAVQILGGYGYTADFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|228472001|ref|ZP_04056769.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276613|gb|EEK15326.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
          Length = 377

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 147/399 (36%), Gaps = 30/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y         A  A      L       + WDK +  P    + R++   G    +   +
Sbjct: 5   YAKELEIIAHAANAFAKQYILAHR----QEWDKSQTFPI--DVFRKAGELGFMGILVPEA 58

Query: 124 FEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +         +      +  +       + + +    + +    +    K W PK+ S E
Sbjct: 59  YGGSGLGYHEYITIVDEISQIDPAIGLSIAAHNSLCVNHLLTFASEEQKKRWLPKLASGE 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                 G+TE   G+D   + +   K  +         +   +  +D 
Sbjct: 119 H-------------IGAWGITEHNTGSDAGGMLTTAVKQGEEWVLNGTKNFITHAISADV 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+   +     +   + +    G    +  +K+G R++ T EL F N        +
Sbjct: 166 VVVIARTGEKGDKHGMTAFVVERGTPGFSNGKKIDKLGMRASETAELVFQNCRIPDQNRI 225

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             V  G ++ MKIL    +    +S+   + ++  AI YA+ R   G  +I    +   +
Sbjct: 226 GAVGEGFIQAMKILDGGRISIGALSLGTAKGAVKAAIQYAKERSQFGKPIISFQAIGFKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+++ +I AA  +  + A+  +  +  +++AA A       K +  ++      EA++  
Sbjct: 286 AELSTEIEAAELMLHKAAHLKETHQPVTQQAAMA-------KLYASELCVKASNEAIQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  +  + + YR++   +I  G+   + L +   L
Sbjct: 339 GGYGYTTDYPVEKFYRDAKLCTIGEGTSEILKLVISRKL 377


>gi|255319521|ref|ZP_05360735.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378455|ref|ZP_06071612.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303461|gb|EET82664.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299740|gb|EEY87652.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 378

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 130/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA    L+     G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA--QELKELAELGAFGMAIPVEWGGAGLDYISLVLALEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    +     T    +++  +  S E+                  LTE   
Sbjct: 82  STIISVQNSLPCGITYAYGTEVQKQEYLTRFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI+ + ++  D        ++  S   +   ++ A  +   G   +   L     
Sbjct: 129 GSDASAISCRAERDGDEWVINGTKQFITSGKHAQVALVFAITDKTSGKKGISCFLVPTHT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMS 324
            G     +++K+G  ++ T  + F N        L     G    +  L    +  A  S
Sbjct: 189 PGYVVANIEDKMGQHASDTATIIFENCRIPAKNLLGKEGEGYKIALSNLEAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L  A+ YA  R   G  ++    +   +AD+A  I AA  L F  A+  D   
Sbjct: 249 VGMARAALDAAVQYANERKAFGVEIVQHQAVAFRLADMATQIEAARQLVFHAASLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V +++++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDSIQIHGGYGYVTDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ +   L +   + K
Sbjct: 362 GASDIQRLVIAREVTK 377


>gi|323490073|ref|ZP_08095294.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323396369|gb|EGA89194.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 380

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 136/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           PG    D+ +  P    + ++    G+    +D  +        +  I    L  +    
Sbjct: 26  PGAIDRDRSKAFPT--EIFKQLSDMGMMGLPFDEKYGGSGADTTSFAIVTEELSRVCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +      + + L  T    + +   I + E                  GLTE   
Sbjct: 84  GITYSAHISLGGAPLNLFGTEEQKEKYLTPICTGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     ++  +  D         +  ++  +    + A      G   +  ++     
Sbjct: 131 GSDAGGTETRAIEDGDDWVINGSKVYITNASHAKHLAITAITGMENGKKEISAIIVPTDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G        K+G  S+ T EL   N         N+     +  K  L+ LD   + ++
Sbjct: 191 EGFTIIDNYEKMGLHSSNTTELVLENVRVP---KENLLGKRGDGFKQFLVTLDGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+     A+ Y++ R   G  L +  V +  +AD+A+ I  A  + ++ A   D
Sbjct: 248 AMAVGIAQGAFNKALAYSKERKQFGKTLSEFQVTQFKLADMAMKIELARNMVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  ++EA+ A       K +  +++  V  EA++  GG GY++E  + R+ R++    
Sbjct: 308 QGRPFTKEASMA-------KLYASEISMEVADEAIQIHGGYGYMKEYEVERYMRDAKLLE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 361 IGEGTSEIQRMVIARQI 377


>gi|299768807|ref|YP_003730833.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
 gi|298698895|gb|ADI89460.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
          Length = 593

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/519 (16%), Positives = 191/519 (36%), Gaps = 58/519 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           ++L  +         +E+A+ A   T  L       G R++  +V     +    R+   
Sbjct: 29  EKLAHVDAATAEAILEEMAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + +  +              SV +   +    +    +
Sbjct: 89  GGWIGLGADEEWGGQGMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++   +D       ++LA+          +  F+VP+ L +     G  N +    ++
Sbjct: 196 IFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDAAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA  R                  ++    ++R + ++  +  A+ A +  +    D   
Sbjct: 316 QYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITK 375

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +A++  +      ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G     +  + + +D  +     +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           E + + +F+ E+ A      ++AA  Y   +  ++  ++
Sbjct: 495 EIEAITQFIIEQAAENVDFPNAAAVDYLHAVGLLSFAYM 533


>gi|262201939|ref|YP_003273147.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262085286|gb|ACY21254.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 366

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 130/366 (35%), Gaps = 24/366 (6%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +E H     L  ++   GL C      +       AH+             +  +   + 
Sbjct: 21  IEQHHVDRDLWNKAGELGLLCMSIPEEYGGGGGTFAHEAVLIEEQAKVADSSWGVSLHNG 80

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A  +    +    K W PK+ S E             V   + +TE   G+D+  + +
Sbjct: 81  IVAHYLLAYGSEEQKKTWLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKT 127

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  +  D         +  +   +D  I++A+ +   G   +  +L +   +G    R+ 
Sbjct: 128 KAIRDGDDYVIDGSKTFITNGAQADLIILVAKTDVSEGAKGISLILVEAERDGFRRGRVL 187

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
           +K+G R   T EL F          L      G ++ M  L    L  A+ SV+GM  +L
Sbjct: 188 DKVGQRGQDTSELFFDGVRVPTSNLLGAEEGQGFIQLMAQLPQERLIIAVASVAGMETAL 247

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A  + Y + R   G  +      K  +A++A +   A           D+  ++  +   
Sbjct: 248 AHTLAYTKERTAFGRPVFGFQNTKFKLAEVATETRIARVFV-------DDCITKHLDGEL 300

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K+W    A  V  E ++  GG GY+ E  IAR + +     I  G+   M  
Sbjct: 301 DIPTVAMAKWWTSDRAMVVADECLQLFGGYGYMNEYPIARMWSDQRVQKIYAGTNEIMKE 360

Query: 453 DVLNLL 458
            +   L
Sbjct: 361 IIARTL 366


>gi|257456395|ref|ZP_05621591.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
 gi|257446055|gb|EEV21102.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
          Length = 390

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 116/379 (30%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     +++    G       + +                        
Sbjct: 26  PLAAEVDEEEKFPE--ENVKKMAKLGFFGIPVPKKYGGQGADVLTYAMCVEEMSKVCGTT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   +     +    T      + P + S                    GLTE   
Sbjct: 84  GVIISAHTSLCIDPIMHFGTEEQKMKYVPDLASG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLL 262
           GTD     +      D         +  ++  +D FI++A       +       +   +
Sbjct: 131 GTDAQGQQTTAVLDGDHWVLNGSKIFITNAGYADVFIVIAVTGIVKDKKGRSVKEISAFI 190

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLD 319
            +    G    + + K+G R ++T EL F +        L V   G +  M  L    + 
Sbjct: 191 VERGFPGFSIGKHEKKMGIRGSSTCELVFEDCIVPKENLLGVQGRGFIIAMTTLDGGRIG 250

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++     +L E I Y + R   G  +  Q   +  IAD+A     A  L +  A  
Sbjct: 251 IAAQALGIAEGALEETIKYTKERVQFGKRISQQQNTQFQIADMAARTQGAQYLVYAAACK 310

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              A           + A + K    ++A  V    ++  GG GY  +  I R  R++  
Sbjct: 311 KQAANDNPN--IRYSVEAAMAKLVAAEVASDVTRRCLQLFGGYGYTRDYPIERMMRDAKI 368

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 369 TEIYEGTSEVQRMVIAANL 387


>gi|126324367|ref|XP_001376623.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 412

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 80/373 (21%), Positives = 138/373 (36%), Gaps = 32/373 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    P   A +++    GL        F            A           G +MS 
Sbjct: 61  DKEHCFPG--AQIKKMGALGLLAMAVPEEFNGAGLDYLAYAIALEEISRGCASTGVIMSV 118

Query: 155 SVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           + +      L   +    + W     S                     L+E   G+D  A
Sbjct: 119 NNSLYLGPILSFGSQEQKQKWISPFTSG-------------DKIGCFALSEPGNGSDAGA 165

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++  Q   D         W  +S  + A ++ A     +    +   L      GL   
Sbjct: 166 ASTTAQLDGDSWVLNGTKAWITNSWEASAAVVFATSSKSLKHKGITAFLVPMPTPGLSLG 225

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSL 332
           + ++K+G R+++T  L F +     +   NV  G     KI +  LD   + ++   + +
Sbjct: 226 KKEDKMGIRASSTANLIFEDCR---IPKDNVLGGTGTGFKIAMQTLDMGRIGIAAQALGI 282

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ YA +R   G  L     ++  +AD+AL + +A  L++R A   D  K  S
Sbjct: 283 AQAALDCAVDYAEKRMAFGSPLTKLQSIQFKLADMALALESARLLTWRAAMLKDNQKPFS 342

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A++ A        + A  +  +A++ +GG GY+ E    RHYR++    I  G+ 
Sbjct: 343 KEAAMAKLAA-------SEAATQIAHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTS 395

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 396 EIQRLVIAGHLLK 408


>gi|146306407|ref|YP_001186872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574608|gb|ABP84140.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 387

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 143/385 (37%), Gaps = 27/385 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    ++RR+   G            +   +              +  
Sbjct: 26  PHAADWDRDHHFPL--EVIRRAAEQGYLALYLKEEDGGLGLSRLSSSLIFEQLAAGCVAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  M+A   +  +   W   + S               +     LTE   G
Sbjct: 84  TAYLTIHNMATWMLASFASAELKDAWLAGLASG-------------QLLASYCLTEPDAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A + ++ ++  D  Y + G K F+S   S D  I++A+  G  G   +   L     
Sbjct: 131 SDAANLRTRARRDGDD-YVIDGSKCFISGAGSTDVLIVMART-GEDGAKGISCFLVPADA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y R ++K+G ++  T  + F          +     G V  MK L    L+ A  S
Sbjct: 189 PGVRYGRNEDKMGWKAQPTRTIAFDGVRIPASHRIGPEGEGFVYAMKGLDGGRLNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L +++ Y   R   G  L +   ++  +AD+  D+ A+  +    A+  D   
Sbjct: 249 LGAAQAALQQSLRYVEERKQFGKPLSEFQALQFKLADMLTDLTASRQMVRLAAHKLDRGH 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A +   + K +      +V  EA++  GG GY+ +  + R  R++  + IL 
Sbjct: 309 GE------ASLYCAMAKRFATDHCFSVCNEALQLHGGYGYLNDYPLERWVRDARVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLF 469
           G+   M + V   L +   + ++L 
Sbjct: 363 GTNEIMRVIVARRLLQQGGMLDRLL 387


>gi|90425736|ref|YP_534106.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107750|gb|ABD89787.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18]
          Length = 390

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 145/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  +  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRDTVRDFSQNEIAPRADDIDKSNQFP--RDLWPKLGALGLHGITVEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         + + PK+ S E+  
Sbjct: 70  AGLGYLEHCIAVEEISRASASVGLSYGAHSNLCVNQLRRNGNEAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRYVLNGSKMWITNGPVAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   + +   NG    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPTAGARGMTAFIIEKGMNGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGDV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   +  M+  L   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPLGIMQACLDVVMPYIHERKQFGQPIGLFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E++A A         +  + A     +A++ +GG+
Sbjct: 297 YVTLNASRAYVYAVAKACDRGETSREDSAGA-------ILYAAERATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|229161448|ref|ZP_04289429.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228621985|gb|EEK78830.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 371

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 21  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 78

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 79  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 125

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 126 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAINGVEDNGRKRISAFIVPTTSEGL 184

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 185 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 244

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 245 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 304

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 305 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 357

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 358 EIQRLVIARHL 368


>gi|329888448|ref|ZP_08267046.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847004|gb|EGF96566.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 387

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 131/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L   +   GL                 H++   R       +   +   +      + 
Sbjct: 48  RGLWNAAGEAGLLGLSLPEEDGGFGGDYRHEVVLMRQLGWKGADHFGISLHNAIVMPYIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P++ S E             +   + +TE   G+D+  + +   K  D
Sbjct: 108 HYGTAEQKARWLPRLQSGE-------------LVGAIAMTEPGAGSDLQGVKTTAVKQGD 154

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++   ++  I++A+ +   G      + LE     G    R  +KIG 
Sbjct: 155 H-YVLNGSKTFITNGQLANFIIVVAKTDPAEGAKGTSLICLETDGAEGFERGRNLHKIGM 213

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +N T EL F++    L   +      G V+ M+ L    L+ A+  V+     L   + 
Sbjct: 214 EANDTSELFFNDVKVPLENVIGDTEGQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLA 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +ID    +  +A+I   +  A            + +  +  A+ A    
Sbjct: 274 YVKERKAFGKRVIDFQNTQFKLAEIKTKLTVAKVFVDHCIGLHLKGQLDAATASMA---- 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW   +    I E ++  GG GY+ E  IA+ Y+++    I  G+   M L +   
Sbjct: 330 ---KYWVTDIQGETIDEMLQLFGGYGYMTEYPIAQLYKDARVQRIYGGTNEIMKLLIART 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|240168573|ref|ZP_04747232.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 592

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 136/520 (26%), Positives = 231/520 (44%), Gaps = 60/520 (11%)

Query: 32  IGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
            G+N Y +D  L   +A +       +    L  +GE +     +  A   + N PQL  
Sbjct: 32  TGLNWYLTDPTLQFSMAYYLQPDELGLAEPHLIRIGELMGGPVTR-WAEETDRNPPQLER 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    +V    ++    +R+I D        R               A  YL+ Q 
Sbjct: 91  YDRWGHDISRVVMPESFTR-SKRAILDAQQAL---RDDSKQAGVSPSLPLFASNYLLNQA 146

Query: 147 E---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A  L +      S+V     P V      K+ S E+D                 +T
Sbjct: 147 DIGMACALGTGGNMVRSLVTAYAPPDVRDYVLGKLNSGEWDGE-----------AAQLMT 195

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+   +AF++LA+ EG       V  FL
Sbjct: 196 ERTGGSDLGALETTATRCGDA-WLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVASFL 254

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGP 308
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                G 
Sbjct: 255 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPQADSGPADGKGLGR 314

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           + ++   + L +A  +V   R +L E++ Y R+R   G  L+D+P+++R +A++ +D+ A
Sbjct: 315 MMELTNKLRLGTASFAVGNARRALVESLCYTRQRRAFGEALVDKPLIRRKLAEMIVDVEA 374

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL F    +      R  +A   RI  P+TK   C++     ++A+E  GG+GYIE  
Sbjct: 375 ALALIFDGTGA---PNHRQPQAIRQRIAVPVTKLRVCRLGITAASDAVELHGGNGYIETW 431

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +AR  R++  N+I  GS N + LDV   +E+                  + + ++  +R
Sbjct: 432 PVARILRDAQVNTIWEGSDNILCLDVRRGMEQSR----------------AHEPLLARMR 475

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           D++S+  +D+   R ++ +I    +A   +     ++A+ 
Sbjct: 476 DAVSVSDDDET-TRLVSRRIEDLDAAITAWTKLDREVAEA 514


>gi|196036724|ref|ZP_03104116.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|228946184|ref|ZP_04108517.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195990688|gb|EDX54664.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|228813475|gb|EEM59763.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 381

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 137/374 (36%), Gaps = 35/374 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMR 329
                 +K+G R++ T E+             N+     +  K  +Y LD   +S++ + 
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVP---KENILGDINKGFKQFLYTLDGGRISIAALA 251

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +A+     A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K
Sbjct: 252 VGIAQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  
Sbjct: 312 PFGKEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   L
Sbjct: 365 GTSEIQRLVIARHL 378


>gi|111022067|ref|YP_705039.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821597|gb|ABG96881.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 132/379 (34%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    P      R + ++ G +       ++                      
Sbjct: 33  PYAKQVDEDARFP---EEARVALVNSGFNAIHVPEEYDGQGADSVATCIVIEEVARVCGS 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      + L  +  + +   P++ S E                   L+E+  
Sbjct: 90  SSLIPAVNKLGTMGLILNGSEELKQQVLPQLASGE-------------AMASYALSEREA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A++ ++ +   D         W  +   S  + ++A  +   G   +   +   + 
Sbjct: 137 GSDAASMRTRAKADGDDWILNGSKCWITNGGKSSWYTVMAVTDADKGANGISAFMVHEND 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G      + K+G + + T EL F N     +    +   P    K  L  LD    ++ 
Sbjct: 197 EGFVVGPKEKKLGIKGSPTAELYFENCK---IPGDRIIGEPGTGFKTALQTLDHTRPTIG 253

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + +  A   +
Sbjct: 254 AQAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYTSAARAE 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +           ++   K +   +A  V  +A++  GG+GY  +  + R  R++    
Sbjct: 314 RGEKN------LGFISAAAKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMRDAKITQ 367

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 368 IYEGTNQIQRVVMSRALLK 386


>gi|289741097|gb|ADD19296.1| mitochondrial short-chain specific acyl-CoA dehydrogenase precursor
           [Glossina morsitans morsitans]
          Length = 407

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 144/376 (38%), Gaps = 32/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK   +P     +R+    GL        +            A          A
Sbjct: 50  PNAAKADKEHLYPE--QQIRKMGELGLMAVAIPEEYGGTGLDYLAYAIAMEEISRGCASA 107

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L     +  K++     + E                   L+E   
Sbjct: 108 GVIMSVNNSLYLGPILAFGNDKQKKEFITPYTTGE-------------KIGCFALSEPGN 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++      D         W  ++    A I+ A  +  +    +   +     
Sbjct: 155 GSDAGAASTTASDKGDHYLLNGTKAWITNAFEGGAAIVFATTDKSLKHKGISAFIVTKGI 214

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
           NG    + ++K+G R+++T +L F +    ++   N+   P    KI +  LD+  + ++
Sbjct: 215 NGFSLGKKEDKLGIRASSTCQLIFEDC---IIPKENMLGQPGYGFKIAMKTLDAGRIGIA 271

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA++R   G  +     ++  IAD+AL I +A  L++R A   D
Sbjct: 272 SQALGIAQASLELAVDYAQKRTAFGKPIAKLQAIQGKIADMALKIESARLLTWRSAWLKD 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S ++EAA A++ A     +C         + ++ +GG GY+ + +  R+YR++    
Sbjct: 332 NNQSYTKEAAMAKLSASEAATFCS-------HQCIQILGGMGYVSDMAAERYYRDARITE 384

Query: 442 ILLGSGNAMVLDVLNL 457
           I  G+     + +   
Sbjct: 385 IYEGTSEIQKIVIAAA 400


>gi|228991442|ref|ZP_04151395.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228768287|gb|EEM16897.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 381

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFTEEYGGSGGDTLSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAFLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEENGKKRISAFIVPTTSKGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDHDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|169600779|ref|XP_001793812.1| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15]
 gi|160705514|gb|EAT89972.2| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15]
          Length = 927

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 152/418 (36%), Gaps = 35/418 (8%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
             +F      +L+ L E V     +E +R      P+         + D+    P  + +
Sbjct: 535 PKDFAPPTQSDLDELRESV-----REFSR---REIPEDI-----AAKTDRDNEFP--NDM 579

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            R+    G      D  F  +    QAH +    L   +        + S    + + L 
Sbjct: 580 WRKFGEAGFLGITADEEFGGLAMGYQAHCVVMEELSRASGSIGLSYAAHSQLCVNQLMLN 639

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K + P + S E                 L ++E   G+D+ ++ +  +++  G 
Sbjct: 640 GNTEQKKKYLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKEVDGGY 686

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  + P +   ++ A+ E       +   + D +  G    +  +K+G R + 
Sbjct: 687 LLNGTKMWITNGPDAHTIVVYAKTEPTAASKGITAFIVDTTSKGFSITKKLDKLGMRGSN 746

Query: 286 TVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F + F      LGD+N     + +   L  L  +   +  M+ SL   + Y  +R
Sbjct: 747 TGELVFDDVFVPKENTLGDINRGVRVLMEGLDLERLVLSAGPLGLMQASLDNVLPYTHQR 806

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    +++  +AD+     A+ A ++ +A + DE+ +                 
Sbjct: 807 KQFGYPIAHNQLVQGKLADMYTKFRASQAFTYSIARAVDESHADPV---IRTQDCAGAIL 863

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  + A  V A+A++ +GG GY+ E  + R  R++    I  G+     + +     K
Sbjct: 864 YAAERASEVAADAVQLMGGMGYMNEVPVGRILRDAKLYEIGAGTSEVRRMVIGRAFNK 921


>gi|70732407|ref|YP_262163.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68346706|gb|AAY94312.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 378

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 129/375 (34%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W         L  ++   G+ CS     +  +     +            L 
Sbjct: 25  EAVPFHGEWEKQGYIDRQLWSKAGEAGMLCSHIPEEYGGLGADFLYSAVVIEEIGRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +  +   + P++ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSESLKHKYLPRLVSGEM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++   +D  I++A+ + + G       L +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGYLADLVIVVAKTDPKAGAKGTSLFLVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F +       LLG        +        L  AI 
Sbjct: 191 TPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQELPQERLTVAIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            ++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 GLASAEAALQWTLEYTRERKAFGKAIADFQNSRFKLAEMATEIQIGRVFVDRCLELHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I 
Sbjct: 311 K-------LDVPTAAMAKYWGTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARSL 378


>gi|120553452|ref|YP_957803.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120323301|gb|ABM17616.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 591

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/538 (17%), Positives = 191/538 (35%), Gaps = 63/538 (11%)

Query: 50  FPSVVHKELELLGE---YVLSCTAQELARMA-NYNTPQLHAYGPGGERWDK----VEFHP 101
             +    ELE   +    ++S    E  ++A     P        G  +D     V+   
Sbjct: 18  LGADKLHELEKYADATPDLISAVIDEAGKLAAEVIQPTNQVGDRQGCSYDPETKLVKTPD 77

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    ++ +  G         F        H ++     ++        M P +T  ++
Sbjct: 78  GFKEAYQKFVEGGWTALDAPLEFGGQGLP--HTLKFVVDEMVCSTNLSLGMYPGLTHGAI 135

Query: 162 VAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL    +  + + +  K+ S E+  T             + LTE   GTD+  I ++  
Sbjct: 136 SALYAHGSEELKQTYLEKLISGEWTGT-------------MCLTEPHCGTDLGLIRTKAT 182

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLED-GSP 267
              DG Y + G K +++    D       ++LA+          +  F+VP+ L D G  
Sbjct: 183 PNDDGSYAIEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVVPKFLPDSGER 242

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N      L++K+G + +AT  + F    G+L+G+ N     +  M     L   +  +  
Sbjct: 243 NPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGEPNKGMSAMFTMMNEARLMVGMQGLGL 302

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             ++  E++ +AR R  S               +I  P ++R +    +      AL+  
Sbjct: 303 AEMAYQESLAFARERLQSRSLSGPKNPDGPADPIIVHPDVRRMLMRQKVLNEGMRALALF 362

Query: 376 LANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  D      + + R       +++ P+ K +             + +GGSG+ ++  
Sbjct: 363 TGHQLDLSVAHPDEEVRENADDLVQLLTPVVKAFLTDEGYNNANWGQQVLGGSGFTQDWP 422

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK-VITI 486
           + +  R+     I  G+     +D++   L  KG  L   LF+ L   L  +        
Sbjct: 423 LEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRALFAELTGYLKDNPDAPYREE 482

Query: 487 LRDSISLCKED-KGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHST 541
           L+ ++   ++    LA+   +    A +AA   L    +  I   +L +R        
Sbjct: 483 LKGAVKGLEQATLWLAQNAPKDPEQAGAAATPYLRLTALTVI--GYLWSRMAAVAGQQ 538


>gi|221129965|ref|XP_002165179.1| PREDICTED: similar to Acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Hydra magnipapillata]
          Length = 529

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 126/374 (33%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +DK    P    L +++   GL        +  +       +             
Sbjct: 169 PMAAHYDKTMEFP--WDLFKKAHGLGLLNVAIPEKYGGLGLNNVSSMIIEEEMSYGCSGI 226

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  + + VA+       K++  ++ S               +     +TE   G
Sbjct: 227 NVALEGNSLACAPVAIAANEEQKKEYFGRLTSE-------------PLVAAYCVTEPGAG 273

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDG 265
           +D+AAI ++ +K  D         W     +++ F +LA+ +              + D 
Sbjct: 274 SDVAAIKTRAEKKGDEWILNGSKMWITGGGVANWFFVLARSDPDPNAKPGKAFTGFIVDA 333

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+   + +  +G R + T  + F +        L  V  G    M          A 
Sbjct: 334 DSPGITLGKKEINLGQRCSDTRGVNFEDVRVPKSNVLGKVGEGFKYAMGAFDKTRPGVAS 393

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V   + +L EA  Y+  R   G  + +   ++  +AD+A  +  A  +  R A   D+
Sbjct: 394 AAVGLAQRALDEATKYSTERKTFGTQISNHQAIQFMLADMASGVELARLMVRRAAWELDQ 453

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +         A I K +   +A    ++ ++  GG+GY  E    +  R++    I
Sbjct: 454 GRKNT-------YYASIAKSFASDVANKNASDCVQIFGGNGYNSEYPAEKLMRDAKIFQI 506

Query: 443 LLGSGNAMVLDVLN 456
             G+     L +  
Sbjct: 507 YEGTSQIQRLIISR 520


>gi|209965240|ref|YP_002298155.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958706|gb|ACI99342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 597

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/557 (17%), Positives = 199/557 (35%), Gaps = 83/557 (14%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
               +    +D L +  IA  P             ++    +E A++      +L     
Sbjct: 7   PLEDIGFVLNDVLDIGQIARLPGYEDAT-----PDLVMTILEEAAKLCEN---ELQPLNR 58

Query: 90  GGERWDK------VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            G+          V     +     R +  G      D  +        H +      LM
Sbjct: 59  SGDEEGCTYENGVVRTPKGFKEAYDRYVEGGWQGLSADPEYGGQGLP--HTVSFVMEELM 116

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P +T  ++ A+    +  + + + PK+ + E+  T             + 
Sbjct: 117 NGANMSFSMYPGLTHGAINAIKVHASDELKRRYLPKMIAGEWSGT-------------MC 163

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   GTD+  I ++     DG Y ++G K F+S+   D       ++LA++       
Sbjct: 164 LTEPHCGTDLGLIKTRAVPADDGSYRITGTKIFISAGEHDLTQNIIHLVLAKLPDAPAGT 223

Query: 251 GRVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L       G  NG+    +++K+G +++AT  + F    G+L+G+ +  
Sbjct: 224 KGISLFIVPKFLPTEDNRPGPRNGVMCGAVEHKMGIKASATCVMNFDEATGWLVGEPHKG 283

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353
              +  M     L   +  +    V+   A+ YA+ R                  +I  P
Sbjct: 284 MRAMFTMMNAARLGVGMQGLGVATVAYQNAVAYAKDRLQGRSLGGTKAPEQPADPIIVHP 343

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            +++ +         A AL + +    D      + + R E   +  ++ P+ K +    
Sbjct: 344 DVRKNLMTAKAFTEGARALGYWVGMMIDVYEKHPDPRVRQEAEDFVALLTPVVKAYFTDA 403

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLF 465
                  + +  GG GYI E  + +  R++    I  G+     LD++     +    L 
Sbjct: 404 GFETAVTSQQMYGGHGYIREWGMEQFVRDARIAMIYEGANGIQALDLVGRKMPQNMGRLL 463

Query: 466 EQLFSTLEQDLGSSGK------------KVITILRDSISLCKEDKGLARFLTEKIALASS 513
            + F  ++ +L ++              K    L+ + ++  + KG+A+      A A+S
Sbjct: 464 RRFFHPMQAELAAAMDEPALIEFAGPLFKAFGKLQQATAIVAQ-KGMAK---PDEAGAAS 519

Query: 514 AAALYRAGMNDIADVFL 530
              L   G+  +  ++L
Sbjct: 520 TDYLRIFGLVAVGWMWL 536


>gi|321468573|gb|EFX79557.1| hypothetical protein DAPPUDRAFT_304439 [Daphnia pulex]
          Length = 406

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 145/377 (38%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R+DK   +P    L  +    GL   +    F            A          A
Sbjct: 48  PNAARFDKEHLYPKEQIL--KMGELGLMGIVVPEDFGGAGLDYLAYAVAIEEISRGCASA 105

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +      L     +  +DW               P           L+E   
Sbjct: 106 GVIMSAHNSLYLGPLLKYGNDQQKRDWV-------------QPFAGGDKIGCFSLSEPGN 152

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A ++     +DG + L+G K ++++   S+A ++ A  +  +    +   +    
Sbjct: 153 GSDAGAASTTAVTSADGGWTLNGTKAWITNGYESEATVVFATTDKSLKHKGISAFVVPKP 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             GL   + ++K+G R ++T  L F +        L     G    M IL    +  A  
Sbjct: 213 TPGLSLGKKEDKLGIRGSSTCNLIFEDCHIAKDNLLGKPGLGFKIAMSILDGGRIGIAAQ 272

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A+ YA +R   G  +     ++  IAD+AL + +A  L++R A   DE 
Sbjct: 273 ALGIGQAALDCAVDYASKRKAFGQPITKLQSIQNKIADMALQLESARLLTWRAAALQDEG 332

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  +EAA A++ A     +          +A++ +GG GY+ +    RHYR++    I 
Sbjct: 333 RAFIKEAAMAKLAASEAATFIS-------HQAIQILGGMGYVSDMPAERHYRDARITEIY 385

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   + K
Sbjct: 386 EGTSEIQRLVIAGNVLK 402


>gi|324514843|gb|ADY46005.1| Isovaleryl-CoA dehydrogenase [Ascaris suum]
          Length = 415

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 129/376 (34%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+    P      R     GL        +         H I    +   +   
Sbjct: 56  PLAAEMDRTNNFPDLRKFWRSLGEHGLLGITVPVEYGGSGLSYLDHVIAMEEISRASGAI 115

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +  + + PK+ + E+                L ++E   
Sbjct: 116 ALSYGAHSNLCVNQIVRNGNDQQKQKYLPKLVNGEH-------------IGALAMSENGS 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +KI D         W  + P +D  I+ A+       + +   + +   
Sbjct: 163 GSDVVSMRLRAEKIGDQYVLNGTKFWITNGPDADVLIVYAKTNPAKNQYGITAFIIEKDF 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G       +K+G R + T EL F+N +      L      V  +        L  A   
Sbjct: 223 EGFSASPKLDKMGMRGSNTSELVFNNCYVPEENVLGEIDKGVYVLMTGLDVERLVLAGGP 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +   A  YA  R   G  +    +++  +AD+   + A  +  + +A + D+  
Sbjct: 283 LGLMQAACDIAFDYAHHREAFGSKIGTFQLIQGKMADMYTTLNACRSYLYNVARATDDGY 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +++             +  + A  +  +A++ +GG+GYI +    R  R++    I  
Sbjct: 343 LTNKD-------CAGVILYLAEHATKLCLDAIQILGGNGYINDYPTGRFLRDAKLYEIGA 395

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L K
Sbjct: 396 GTSEIRRLVIGRALNK 411


>gi|225683417|gb|EEH21701.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 433

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 148/412 (35%), Gaps = 35/412 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            +L  L E V     QE AR      P+         R D     PA   +  +    G 
Sbjct: 47  ADLLELRERV-----QEFAR---REIPE-----EVAARTDLQNNFPA--EMWGKLGKAGF 91

Query: 116 HCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                D  +  +    QAH +    +   +        + S    + ++L   P     +
Sbjct: 92  LGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQLSLNGNPEQKAKF 151

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + S E                 L ++E   G+D+ ++ +  + +  G        W 
Sbjct: 152 LPSLISGE-------------KVGALAMSEHSAGSDVVSMKTTAKAVDGGYLLNGTKMWI 198

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F + 
Sbjct: 199 TNGPDADYIVVYAKTKPDAGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFDDV 258

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
           F     +LG++N     + +   L  L  +   +  M+ +L   + Y   R      +  
Sbjct: 259 FVPQENVLGEVNRGVKVLMEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQFDAPIAH 318

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMA 408
             +++  +AD+   ++A+ A ++  A   D+A +        A  +        +  + A
Sbjct: 319 NQLIQGKLADMYTKLSASRAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAILYAAERA 378

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                +A++ +GG+GY+ E    R  R++    I  G+     + +     K
Sbjct: 379 TECALDAIQLMGGNGYVNEIPAGRLLRDAKLYEIGAGTSEIRRMLIGREFNK 430


>gi|295675473|ref|YP_003603997.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435316|gb|ADG14486.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 595

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/489 (19%), Positives = 177/489 (36%), Gaps = 65/489 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-A 102
           + + P         L    ++   +E  +  +     L+      G  +  D V   P  
Sbjct: 25  LRHMPKHAD-----LDADTINAVLEEAGKFCSEVLFPLNHSGDKEGCTYVGDGVVTTPKG 79

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-M 161
           +    ++ +  G      D  +       A    A    L +  +A  +       A   
Sbjct: 80  FKEAYQQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGAYEC 138

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    TP + + + PK+ +  +  T             + LTE   GTD+  + ++ +  
Sbjct: 139 LHAHGTPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPN 185

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-----EDG 265
            DG Y +SG K F+SS   D       ++LA++         +  F+VP+ +     E G
Sbjct: 186 GDGSYSISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+    +++K+G   NAT  +   N  G+++G+ N     +  M     L   + S+
Sbjct: 246 ERNGVKCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSL 305

Query: 326 SGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS 373
               V+   ++ YA+ R                  +I  P ++R +        A  A S
Sbjct: 306 GLTEVAYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGRAFS 365

Query: 374 FRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A   D      +   R E A    ++ PI K +    A      AM+  GG G+I E
Sbjct: 366 YWSALQIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAE 425

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-----NLFEQLFSTLEQDLG--SSG 480
             + ++ R++  N I  G+     LD+L     G        F +L +   +  G     
Sbjct: 426 WGMEQYVRDARINMIYEGTNGIQSLDLLGRKVLGDMGAKLKKFGKLVAEFVEAEGIKPEM 485

Query: 481 KKVITILRD 489
           ++ +  L D
Sbjct: 486 QEFVNPLAD 494


>gi|47230106|emb|CAG10520.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 415

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 129/372 (34%), Gaps = 24/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  D+    P      +     GL           V      H I    +  ++   
Sbjct: 59  PYADEIDRKNDFPRMREFWKELGEMGLLGVTVSVEDGGVGLGYLDHVIVMEEMSRVSGGV 118

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +  + + PK+ + E+                L ++E   
Sbjct: 119 ALSYGAHSNLCVNQLVRHGNDKQKEKYLPKLLTGEH-------------VGALAMSEPNA 165

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  I+ A+ +       +   + +   
Sbjct: 166 GSDVVSMRLKAKKQGDHYVLNGNKFWITNGPDADVLIVYAKTDPGAHQRGITAFVVEKGM 225

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N        L      V  M     L  L  A   
Sbjct: 226 PGFSTAQKLDKLGMRGSNTCELIFENCRIPEENVLGSLNKGVYVMMSGLDLERLVLAAGP 285

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L  A+ Y   R   G  +    +M+  +AD+   +++     + +A + D+  
Sbjct: 286 VGIMQAVLDCAVPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLYNVARAADKGH 345

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +++             +C + A  V  + ++C+GG+GYI +    R  R++    I  
Sbjct: 346 LSAKD-------CAGVILYCAENATQVALDGIQCLGGNGYINDYPAGRFLRDAKLYEIGA 398

Query: 445 GSGNAMVLDVLN 456
           G+     L +  
Sbjct: 399 GTSEIRRLIIGR 410


>gi|330811602|ref|YP_004356064.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379710|gb|AEA71060.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 378

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 132/375 (35%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V +H  W         L  ++   G+ CS    ++  +     +            L 
Sbjct: 25  EAVPYHSQWEKQGHVDRQLWNKAGEAGMLCSHLPEAYGGLDADFLYSTVVIEEIGRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +  +   + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSEALKHKYLPKLVSGEM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++  ++D  I++A+ + + G       L +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGTSLFLVEAG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G    M+ L    L  AI 
Sbjct: 191 TPGFEKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQELPQERLTVAIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            ++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 GLASAEAALQWTLDYTRERKAFGKSIADFQNTRFKLAEMATEIQIGRVFVDRCLELHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  IAR + ++    I 
Sbjct: 311 K-------LDVPTAAMAKYWGTDLQCKVLDECVQLHGGYGFMWEYPIARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARSL 378


>gi|183219484|ref|YP_001837480.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909627|ref|YP_001961182.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774303|gb|ABZ92604.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777906|gb|ABZ96204.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 388

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 142/400 (35%), Gaps = 34/400 (8%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            ++LAR    N   P+   +   G      E+      +L+++   GL        +   
Sbjct: 13  LRDLARDFAKNEMIPKAEHHDHTG------EYP---KEILKKAFDVGLMNMHIPAEYGGA 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 ++ A+             +  +  + + V L     V K +             
Sbjct: 64  GLGVLDELIASEELFYGCSGMATAILANNLALAPVLLGADDYVMKKFI------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             PM +T       +TE   G+D+A I +  +++ D         W  ++  +D F +LA
Sbjct: 112 -QPMSETFTLAAYAVTEPGAGSDVAGIRTTAKRVGDEYIVNGSKMWITNAGHADWFFVLA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
           + +   G   +   + D    G+   + +  +G R + T  + F +        +     
Sbjct: 171 KTDPNAGHKGMTGFIVDAKTPGIIIGKKEKNMGQRCSDTRGVTFEDVKVPKENMIGKEGE 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M          AI +V   R +L  +I YA  R+  G  +     +   IA++A 
Sbjct: 231 GFKIAMGAFDKTRPAVAIGAVGVARAALDHSIRYANTRNAFGKPISVNQGVSFMIAEMAR 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DI A   L ++ A   D     +         A I K +C  MA  V  +A++  GG G+
Sbjct: 291 DIEAGRLLCWQSAWLIDNGFRNT-------YQASIAKVFCADMAMRVTTDAVQIFGGYGF 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            EE  + +  R++    I  G+     + +   L  G  +
Sbjct: 344 NEEYPVEKLMRDAKIFQIYEGTSQIQRVIISKFLNDGVGI 383


>gi|170726671|ref|YP_001760697.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812018|gb|ACA86602.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 585

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/515 (18%), Positives = 192/515 (37%), Gaps = 55/515 (10%)

Query: 34  MNAYSSDSL----LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P      L  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYQAPLAEMKFLLEKVFDAPQTW-ASLPEIAENVDLDTAVAIMDEADKISRELIHPIN 59

Query: 89  PGGERWD------KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G+         KV     +  +  +    G      D  F  +   +   +    +  
Sbjct: 60  RSGDEQGVTHQDAKVITPDGFKEVYSQYAEGGWVGFCGDPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             A  + +
Sbjct: 120 SACNSFTLYGSLTAGAALCINAHGSDALKEKYLPMMYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--RVGC 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTKATPNDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDTSGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  D     G  NG+    +++K+G +++AT  + +    G+L+G  N     + 
Sbjct: 227 FLVPKIKVDDEGNLGEANGVTVGSIEHKMGLKASATCVMNYDGAQGYLIGKPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         ++    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATSDPILVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +I +   A  ALS       D     + +++++   Y  ++ P++K +           
Sbjct: 347 LNIRVLTEAGRALSVLTGQQLDIAKYGDGEAQAKANRYVGLLTPVSKAFLSDRGLDAAVT 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTL 472
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL    +  +  
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALTEFVAEC 466

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
            + L S  +          +L  E   +A+ + +K
Sbjct: 467 SEKLASLSQVDENQKAKVQALFDELIEVAQLVNDK 501


>gi|195569586|ref|XP_002102790.1| GD19319 [Drosophila simulans]
 gi|194198717|gb|EDX12293.1| GD19319 [Drosophila simulans]
          Length = 405

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 145/378 (38%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NASKFDREHLYPE--KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W  ++  ++A I+ A    ++    +   +   +  
Sbjct: 154 SDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATK 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G R ++T +L F +    ++   N+   P    KI +  LD+  + ++G
Sbjct: 214 GFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAG 270

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 331 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 383

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 384 YEGTSEIQRLVIAGSILK 401


>gi|332878891|ref|ZP_08446606.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683242|gb|EGJ56124.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 380

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 148/396 (37%), Gaps = 34/396 (8%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ     A                WD+ +  P    + R++   G    +    +     
Sbjct: 13  AQAAKEFAEKYVRPHVM------EWDESQEFPI--EVFRKAGDLGFMGVLVPEIYGGSGL 64

Query: 130 KQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               +      +  +       + + +    + +         + W PK+ S E+     
Sbjct: 65  DYHDYIAIVEEISKVDPSIGLSIAAHNSLCTNHILSFGNEEQKQRWLPKLASGEW----- 119

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLA 247
                       G+TE   G+D   + +   K  D  + L+G K F++   S    +++A
Sbjct: 120 --------IGAWGITEHNTGSDSGGMATTAVKDGD-SWVLNGAKNFITHGKSGQIAVVIA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
           +   +     +     +    G    + +NK+G R++ T EL F +        L  V  
Sbjct: 171 RTGEKGDKHAITAFAVERGTPGFSSGKKENKLGMRASETAELVFQDCRIPDANRLGEVGE 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G ++ MKIL    +    +S+   + +   A+ YA+ R   G  LI+   +   +AD+A 
Sbjct: 231 GFIQAMKILDGGRISIGALSLGIAKGAYEAALKYAKERVQFGKRLIELQGVGFKLADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I A+  L  + A   +  +  +   A A++       +  +M   V  EA++  GG GY
Sbjct: 291 EIEASELLLHKAAYQKNNHQRVTLSGAMAKM-------YSSEMCVRVATEAIQIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            ++  + + +R+S   +I  G+     L +   ++K
Sbjct: 344 TKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQIDK 379


>gi|320034301|gb|EFW16246.1| isovaleryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 430

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 131/360 (36%), Gaps = 17/360 (4%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + ++    G      D  +  +    QAH I    +   +        + S    + ++
Sbjct: 81  EMWQKLGEAGFLGVTADEQYGGLSMGYQAHCIVLEEISRASGSIGLSYAAHSQLCVNQLS 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P + S E                 L ++E   G+D+ ++ +  + +  
Sbjct: 141 LNGTPEQKAKYLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKAVDG 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  + P +D  ++ A+ E   G   +   + + S  G    R  +K+G R 
Sbjct: 188 GYILNGTKMWITNGPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRG 247

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F + F     +LG +N     + +   L  L  +   +  M+ +L   + Y  
Sbjct: 248 SNTGELIFEDVFVPKENILGTVNRGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTH 307

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   +A + A ++  A   D + +  E            
Sbjct: 308 TRKQFNAPIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGA 367

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 368 ILYAAERATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 427


>gi|268568112|ref|XP_002640162.1| Hypothetical protein CBG12664 [Caenorhabditis briggsae]
 gi|187029266|emb|CAP31609.1| hypothetical protein CBG_12664 [Caenorhabditis briggsae AF16]
          Length = 420

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 117/291 (40%), Gaps = 16/291 (5%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
                  E       P   T       L+E   G+D  ++ +  +K  D         W 
Sbjct: 133 LILQLGTEEQKQKYLPKSVTGSVGSFALSEVSAGSDAFSLKTVAKKDGDDFVINGSKMWI 192

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            +S  +++ ++ A  +   G   +   + D    GL   + ++K+G R+++T  + F N 
Sbjct: 193 TNSGHAESLLLFANADVSKGYKGITCFMLDIKTKGLTVGKKEDKLGIRASSTCPIHFDNV 252

Query: 295 FGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI 348
                    +     +  K  I  L++  + +    + LA     E I Y ++R   G  
Sbjct: 253 RVHKSA---ILGEFGKGYKYAIECLNAGRIGIGAQMLGLADGCFNETIPYLQQREQFGQR 309

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +ID   ++  IA I  +I AA  L +  A   ++      EAA A       K +  ++A
Sbjct: 310 IIDFQGLQHQIAQIRTEIEAARLLVYNAARMKEQGLPFVREAAMA-------KLYASQVA 362

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
               ++ +E +GG G+ ++  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 363 TNTTSKCVEWLGGVGFTKDFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 413


>gi|293605739|ref|ZP_06688115.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292815864|gb|EFF74969.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 375

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 81/399 (20%), Positives = 147/399 (36%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +L+   Q +  MA      L    P  ERWD+   +PA    ++     G    +    +
Sbjct: 2   LLNDEHQSIQDMARRFA--LERLAPNAERWDREHHYPA--DAIQEMAQLGFFGMLVPEEW 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
           +           A             +MS   + A M  L          +   + S   
Sbjct: 58  DGNDSGYVSYAVALEEIAAGSGACSTIMSVHNSVACMPILKFGNDAQKDQFLRPLASG-- 115

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-A 242
                      +   G  LTE + G+D +++ ++ ++  +  Y L+G K F++S  S   
Sbjct: 116 -----------AHIGGFALTEPQAGSDASSLRTRARRDGED-YILNGAKQFITSGKSGQT 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            I+ A  +   G   +   +      G    R+++K+G  ++ T  + F +        L
Sbjct: 164 VIVFAVTDPDAGKRGISAFIVPTDTPGYQVLRVEDKLGQHASDTCHIAFEDMRIPAAYRL 223

Query: 303 N-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    +  L    +  A  SV   R +   A  YAR R   G  + D   +   +
Sbjct: 224 GAEGEGYKIALANLEGGRIGIASQSVGMARAAFECARDYARERQAFGKPIFDHQAVAFRL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  I AA  +    A   +  +        A + A + K +  +MA  V + A++ +
Sbjct: 284 ADMATQIHAARQMVLHAAALREAGRP-------ALMEASMAKLFASEMAEKVCSAAIQTL 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+++  + R YR+     I  G+ +   L +   L
Sbjct: 337 GGYGYLKDFPVERIYRDVRVCQIYEGTSDIQRLVIARGL 375


>gi|284029421|ref|YP_003379352.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808714|gb|ADB30553.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 387

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 131/376 (34%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++   P   A          H      ++          +        A   +
Sbjct: 31  PHAGDVDELAEFP--KAAYDALKASDFHAPHIPEAYGGAGADALATVIVIEEVARACASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  + +V + + P             P+          L+E   G
Sbjct: 89  SLIPAVNKLGSLPLLLSASEQVKQRYLP-------------PVAAGDAMFSYCLSEPEAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++              +W  ++ +SD + + A  +       +   + + S  
Sbjct: 136 SDAASMKTRAVADGSQYVLNGVKRWITNAGVSDYYTVFAVTDPSARSKGISAFVVEKSDE 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N       ++G+     G          +  A  ++
Sbjct: 196 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEPGTGFGTAMATLDHTRVTIAAQAL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ Y + R   G  + +   ++  +AD+ + I AA  L++  A   +  + 
Sbjct: 256 GIAQGALDYALGYVKERKQFGKPIAEFQGLQFMLADMGMKIEAARQLTYAAAARSERNEP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A AV  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 316 D------LTYFGAAAKCFASDVAMAVTTDAVQLLGGYGYTHDYPVERMMRDAKITQIYEG 369

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L KG
Sbjct: 370 TNQVQRIVMARQLLKG 385


>gi|124487759|gb|ABN11966.1| putative acyl-coenzyme A dehydrogenase, short chain
           [Maconellicoccus hirsutus]
          Length = 297

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 124/294 (42%), Gaps = 16/294 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  + +       P           L+E   G+D  A ++   +  +         W  +
Sbjct: 14  KFGNDKQKEEFLRPFTNGQKIGCFALSEPGNGSDAGAASTTATQKGNDFVLNGSKCWITN 73

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              S+A I+ A  +       +   L +    GL   + ++K+G R ++T  L F +   
Sbjct: 74  GYESEAGIVFATTDKSKKHKGISAFLINKPCPGLTLGKKEDKLGIRGSSTCTLNFEDC-- 131

Query: 297 FLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
            ++   N+   P    KI ++ LD+  + ++   + +A+     A+ YA  R   G  ++
Sbjct: 132 -IVNGENILGEPGMGFKIAMMSLDAGRIGIASQALGIAQASLDVAVEYASTRTAFGASIL 190

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  IAD+AL + +A  L++R A   D+ +  ++EAA A++ A     +       
Sbjct: 191 KLQAIQTKIADMALRLESARLLTWRAAYLKDKKQPFTKEAAMAKLAASEAATFNS----- 245

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
              + ++ +GG GY+ +    RHYR++    I  G+     L + + + K  N+
Sbjct: 246 --HQCIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIASNVIKQYNI 297


>gi|115400327|ref|XP_001215752.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191418|gb|EAU33118.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 430

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 79/428 (18%), Positives = 151/428 (35%), Gaps = 38/428 (8%)

Query: 41  SLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
             L  L    P         EL  L E V     QE  R      P+         R D 
Sbjct: 30  PALRTLATKHPNGFVPPTEDELLELRERV-----QEFTR---REIPE-----EVAARTDA 76

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPS 155
               PA   + ++    G      +  +  +    QAH +    +   +   A    + S
Sbjct: 77  QNEFPA--DMWKKLGDAGFLGVTANEEYGGLGMGYQAHCVVMEEISRASGSIALSYAAHS 134

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
               + ++L  +P     + P + S                   L ++E   G+D+ ++ 
Sbjct: 135 QLCVNQLSLNGSPDQKARFLPGLLSG-------------DKIGALAMSEHSAGSDVVSMK 181

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           +  + +  G        W  + P +D  ++ A+ E   G   +   + + + +G    R 
Sbjct: 182 TNAKAVDGGYVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGITAFVVEKTFDGFSCARK 241

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G R + T EL F N F     +LG++N     + +   L  L  +   +  M+ +L
Sbjct: 242 LDKLGMRGSNTGELIFDNVFVPKENILGEVNRGVKVLMEGLDLERLVLSAGPLGIMQAAL 301

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R   G  +    +++  +AD+   +AA+ A ++  A   D + S       
Sbjct: 302 DLVLPYTHVRKQFGTPIAHNQLIQGKLADMYTKLAASRAYTYATARQIDNSASSG--VVI 359

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                     +  + A     +A++ +GG+GYI E    R  R++    I  G+     +
Sbjct: 360 RTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRM 419

Query: 453 DVLNLLEK 460
            +     K
Sbjct: 420 VIGRAFNK 427


>gi|313499664|gb|ADR61030.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 375

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 132/378 (34%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+WDK    P     +      GL   +    +            A       
Sbjct: 20  ERLRPFAEQWDKEHRFP--KEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +MS   +   +  L     +  + +               P+   ++     LT
Sbjct: 78  DGACSTIMSVHNSVGCVPILRFGNEQQKEQFL-------------TPLATGAMLGAFALT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E + G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   + 
Sbjct: 125 EPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDS 320
                G    R+++K+G  ++ T ++ F N    +   L     G    +  L    +  
Sbjct: 185 PTDSPGYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLGAEGEGYKIALANLEGGRIGI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +   A  YA  R   G  LI+   +   +AD+A  I+ A  +    A   
Sbjct: 245 ASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAFRLADMATKISVARQMVLHAAALR 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EA+ A       K +  +MA  V ++A++ +GG GY+ +  + R YR+    
Sbjct: 305 DAGRPALVEASMA-------KLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVC 357

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+ +   + +   L
Sbjct: 358 QIYEGTSDIQRMVIARNL 375


>gi|183222229|ref|YP_001840225.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912282|ref|YP_001963837.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776958|gb|ABZ95259.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780651|gb|ABZ98949.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 388

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 135/374 (36%), Gaps = 25/374 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           WD+   HP    L+ +   + G++  +    +         +  A        L      
Sbjct: 32  WDEKNQHPT--ELINKMRSELGINGLVIPEEYGGWGLGAIEQCLAIEELSRGCLGIALGF 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +      +    T      W P+I   ++              +   L+E   G+D+ 
Sbjct: 90  AYTGLGVLPILKGATHEQKLKWLPEIADGKF-------------GVSFCLSEPGAGSDVP 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +T++ +K  D        +W   +  + AF + A  +   G   V       S  GL  
Sbjct: 137 GMTTRAEKKGDKWIINGAKQWITGASDAQAFTVFAYTDKNRGTRGVSCFYVPRSAKGLTV 196

Query: 273 QRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + ++K+G R+++T ++ F +       L+G  N+                A+M V   +
Sbjct: 197 GKKEDKLGIRASSTHQVIFEDCEVGEDALVGKENLGFVYALQTLNASRPFVAVMGVGVAQ 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  YAR R   G  +     ++  +AD+++ +  A  ++++ A   D        
Sbjct: 257 AALDHAARYAREREQFGVKIGTFQAVQHMLADMSIKVETAREITYKAARLSDANDPN--- 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  + I K +  + A     +A++  GG GY +E  + +  R+S   +I  G+   
Sbjct: 314 ---LPKYSAIAKAYASECAVQCATDAVQIFGGYGYTKEYPVEKLMRDSKILTIFEGTTQI 370

Query: 450 MVLDVLNLLEKGTN 463
              ++   + K   
Sbjct: 371 QKNEIAAYVIKEAA 384


>gi|220917381|ref|YP_002492685.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955235|gb|ACL65619.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 380

 Score =  281 bits (719), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 140/380 (36%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    PA  A +++    GL        +            A           
Sbjct: 26  PHARRWDRDHEFPA--AAVKQLGEMGLMGVAVPAEWGGAGMDNVSYALAMEEISRGCAGT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS S +      L   +    K++               P  +        LTE   
Sbjct: 84  GVIMSVSNSLYCDPVLKYGSDAQRKEFLE-------------PYARGEKLGCFALTEPMS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +   +  D         +  + P +DA ++ A  +       +   L     
Sbjct: 131 GSDAAEMRTVAVRRGDEYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGISAFLVPTDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    +  +K+G R++ +  L F          L       +  KI +  LD   + ++
Sbjct: 191 RGFSRGKPDDKVGIRASGSCSLFFEGCAIPARHRLG---EEGDGFKIAMGTLDGGRIGIA 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +      EA+ YA+ R   G  +     ++  +AD+A +I AA  L  R A++ D
Sbjct: 248 GQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLADMATEIDAARLLVLRAASAKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                S E+A A       K +  +M+  V ++A++  GG GY++E  + RH+R+S    
Sbjct: 308 RGVRHSAESAMA-------KLFASEMSERVTSKAIQIHGGYGYVKEFDVERHWRDSRITE 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   + KG
Sbjct: 361 IYEGTSEIQRLVISASVLKG 380


>gi|253700009|ref|YP_003021198.1| Butyryl-CoA dehydrogenase [Geobacter sp. M21]
 gi|251774859|gb|ACT17440.1| Butyryl-CoA dehydrogenase [Geobacter sp. M21]
          Length = 379

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 141/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P   +L+R+    G   S     +        ++ I    +       
Sbjct: 26  PLAMQIDEEHMIPD--SLVRKMGEMGFLGSYLPEEYGGAGLDMLSYAIVVEEVSKACGSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    K W P +                 V     LTE   
Sbjct: 84  GVLISAHTSLACGPIYTFGTEEQKKKWLPDL-------------NTGKVIGCFLLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  AI +  ++  D    ++G K F+++       ++ A  +  +    V   + D  
Sbjct: 131 GSDAGAIATTYKRDGDHF-VINGSKIFITNGGYKGTGVLFATSDKSLKHKGVSAFIIDLQ 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + + K+G R + T      +    +    N+     +  KI +  L+   + +
Sbjct: 190 TPGVEILKNEKKLGIRGSYTTAFALDSVRIPV---ENLLGQEGQGFKIAMDTLNGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  + +   ++  +AD+   I  +  ++++ A   
Sbjct: 247 ASQALGIAEGAFDLALAYSKERKQFGHPICELQAIQFKLADMYAKIETSKLMTYKAACLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K+ + E+A  +++A     +  K       EA++  GG G+I +  + R YR++   
Sbjct: 307 DGKKNYTMESAMCKMLASEAATFVTK-------EAIQIHGGYGFIVDYEVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + V  LL
Sbjct: 360 EIYEGTNEVQRVVVSKLL 377


>gi|313113540|ref|ZP_07799129.1| butyryl-CoA dehydrogenase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624267|gb|EFQ07633.1| butyryl-CoA dehydrogenase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 391

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 138/385 (35%), Gaps = 32/385 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ++ D  E+ P     + +    G+    +            ++ +    L  +    
Sbjct: 26  PLAKKVDAEEYFP--KETVEKMGKLGMMGIYFPTEVGGAGGDVLSYVMAVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    TP     + PK+ S E+                 GLTE   
Sbjct: 84  GVIVSAHTSLCAAPIYENGTPEQKAKYLPKLCSGEW-------------LGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGCFLVPR 260
           GTD     +  ++  + G + L+G K F+++   ++ FI++A  +               
Sbjct: 131 GTDAQGQQTFAKQDPETGDWILNGSKIFITNAGYANVFIVIAVTDIVPDKKGRPTKQCSA 190

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + + +  G    + ++K+G R ++T EL F +        L V     +    +  LD 
Sbjct: 191 FIVERTDPGFSVGKAEDKMGIRGSSTCELIFEDCRIPADRMLGVRGRGFQ--LAMATLDG 248

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +AE      + Y + R   G  +      +  +A++   + AA  L + 
Sbjct: 249 GRIGIASQALGIAEGALEETVAYVKERKQFGRSISAFQNTQFELAEMKARVEAAKYLVYA 308

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A    EA    +      + A   K    + A  V    ++  GG GY  +  I R  R
Sbjct: 309 AALKKQEAMDGKK--VRYSVEAAQAKLIAARTASDVTRRCLQLFGGYGYTRDYPIERMMR 366

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+    ++ +   L K
Sbjct: 367 DAKITEIYEGTSEVQMMVISGALLK 391


>gi|209963739|ref|YP_002296654.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209957205|gb|ACI97841.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 390

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 144/379 (37%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    GL     +  +         H +    +   +   
Sbjct: 34  PRAAEIDRTDQFPM--DLWRKFGDLGLLGVTVEEEWGGAGLGYVEHMVAMEEISRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L  +P   + + PK+ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQIRLNGSPEQKRRYLPKLISGEH-------------VGALAMSETGA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 139 GSDVVSMKLRAERRGDRFVLNGSKMWITNGPDADVLVVYAKTDPTAGPKGITAFLIEKGF 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V  +   +  + A++S   
Sbjct: 199 KGFSCAQKLDKLGMRGSHTGELVFQDCEVPEENVLGRMNGGVRVLMSGLDYERALLSAGP 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +L   + Y  +R   G  + +   ++  +AD+ + + +  A ++ +  + D  +
Sbjct: 259 IGIMQAALDVVVPYVHQREQFGQPIGEFQFIQGKLADMYVALNSTRAYAYAVGKAADLGR 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA   +MA        + A  V  +A++ +GG+GYI E    R  R++    I  
Sbjct: 319 ITRKDAAGVILMAA-------ENATKVALDAIQVLGGNGYINEFPTGRLLRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L + T 
Sbjct: 372 GTSEIRRMLIGRELFRETA 390


>gi|17064982|gb|AAL32645.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana]
 gi|22136242|gb|AAM91199.1| isovaleryl-CoA-dehydrogenase precursor IVD [Arabidopsis thaliana]
          Length = 409

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 138/376 (36%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  ER DK    P    L +      LH     +      +    H I    +   +   
Sbjct: 52  PHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSV 111

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 112 ALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEH-------------VGALAMSEPNA 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +K+  G        W  + P ++  ++ A+ + + G   +   + +   
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            G    +  +K+G R + T EL F N F      L+     V  +     L  L  A   
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGP 278

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  ++  L   + Y R+R   G  + +   ++  +AD+   + ++ +  + +A   D  K
Sbjct: 279 LGIVQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGK 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++          T     + A  V  +A++C+GG+GYI E +  R  R++    I  
Sbjct: 339 VDPKD-------CAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGA 391

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 392 GTSEIRRIVIGRELFK 407


>gi|302419223|ref|XP_003007442.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261353093|gb|EEY15521.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 435

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 76/422 (18%), Positives = 149/422 (35%), Gaps = 39/422 (9%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
                 F      +L  L E V   T +E+                   R DK    P  
Sbjct: 41  QKHPQGFEPPTEADLAELRERVQDFTRREMTEEV-------------AARTDKTNAFP-- 85

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           + +  +    G      D     +    QAH +    L   +        + S    + +
Sbjct: 86  NDMWPKLGEAGFLGITADEEVGGLAMGYQAHCVVMEELSRASGSIGLSYAAHSQLCVNQL 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L   P   K + P + +              +    L ++E   G+D+ ++ +  +K+ 
Sbjct: 146 QLNGNPEQKKKYLPGLIAG-------------TSIGALAMSESGAGSDVVSMRTTAKKVD 192

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGN 281
            G        W  + P +D  ++ A+ E   G   +   + +  + +G   QR  +K+G 
Sbjct: 193 GGYLINGSKMWITNGPDADVIVVYAKTEPDAGSKGITAFIVETKTSDGFSCQRKLDKMGM 252

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R + T EL F   F     +LG+LN     + +   L  L  +   +  M+ +L   + +
Sbjct: 253 RGSNTGELSFDAVFVPDDRVLGNLNGGVRVLMEGLDLERLVLSAGPLGIMQAALDVTLPF 312

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +AD+   + A+ A ++  A + DEA               
Sbjct: 313 AHQRKQFGQPIAHNQLVQGKLADMYTKLQASRAYTYATARTVDEA------GTIRTQDCA 366

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  + A     + ++ +GG GY+EE   +R  R++    I  G+     + +    
Sbjct: 367 GAILYAAERATECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGTSEIRRMVIGRAF 426

Query: 459 EK 460
            K
Sbjct: 427 NK 428


>gi|257056851|ref|YP_003134683.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586723|gb|ACU97856.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 382

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 124/377 (32%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +P     LR     G H       +                       A
Sbjct: 27  PYAAEVDEQERYPV--EALRALTEAGFHALHIPEEYSGQGADAVATCIVIEEVARVDASA 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P I S E              +    L+E+  G
Sbjct: 85  SLIPAVNKLGTQPILLSASEELKQLVLPSIASGE-------------ASASYALSEREAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           +D A++ ++     D         W  ++  S  + ++A  +   +     +   +    
Sbjct: 132 SDTASMRTRAHLDGDHWVLNGTKCWISNAGESSWYTVMAVTDPNAKKKAHGISAFVVHKD 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G + + T E+ F N       ++G+                      
Sbjct: 192 DPGFSVGPKERKLGIKGSPTREIYFENCTIPADRIIGEPGTGLKTALATLDHTRPTIGAQ 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L   + Y + R   G  +     ++  +AD+A+ I AA  + +  A + +  
Sbjct: 252 ALGIAQGALDATVEYVKERKQFGQSISQFQGVQFMLADMAMKIEAARHMVYASAAATERG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A A  +A   K +   +A  V  +A++  GG+GY  +  + R  R++    I 
Sbjct: 312 D------ARASFLASAAKTYASDVAMEVTTDAVQLFGGAGYTRDFPVERMMRDAKITQIY 365

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 366 EGTNQIQRMVMARQLLK 382


>gi|242024758|ref|XP_002432793.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
 gi|212518302|gb|EEB20055.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
          Length = 423

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK     +     ++    GL        +         H I    L   +   
Sbjct: 62  PKASEIDKNNNFSSLREFWKKLGDLGLLGITASPDYGGTGGTYTDHCIIMEELSRASGAI 121

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + ++        K + PK+ S E+                L ++E   
Sbjct: 122 ALSYGAHSNLCVNQISRNGNEEQKKKYLPKLCSGEHMG-------------ALAMSEPGS 168

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED 264
           G+D+ ++  + +K   G  Y L+G+K W  + P +D  ++ A+ +        +   L +
Sbjct: 169 GSDVVSMKLKAEKDPSGKFYVLNGNKFWITNGPDADVLVVYAKTDTKSKPQHGISAFLIE 228

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F N       LLG  N     +        L  +
Sbjct: 229 KGFEGFSTAQKLDKLGMRGSNTCELIFENCKVPAENLLGPENKGVYVLMSGLDYERLVLS 288

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V  M+ +   A  Y   R   G  +    +++  +AD+   ++A  +  F +A + D
Sbjct: 289 AGPVGLMQAACDVAFDYVHVRKQFGTKIGQFQLLQGKMADMYTRLSACRSYMFSVARACD 348

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+  ++             +C + A  V  +A++C+GG+GYI +    R  R++    
Sbjct: 349 AGKANKKD-------CAGVILYCAENATQVALDAIQCLGGNGYINDYPTGRLLRDAKLYE 401

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 402 IGAGTSEIRRSLIGRAL 418


>gi|305664638|ref|YP_003860925.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88708655|gb|EAR00891.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 380

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 128/370 (34%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D  +  PA    +++    G    + +  +        ++ +    L  +    +  +  
Sbjct: 32  DDAQKFPA--EQVKQMGELGFLGMMVNPKYGGSGLDTVSYALVMEELSKIDASASVVVSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +         + +  K+ + E             V     L+E   G+D  +
Sbjct: 90  NNSLVCWGLETYGNEEQKQKYLTKLATGE-------------VIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   ++ ++++AQ +   G   +  L+ +    G    
Sbjct: 137 QKTTAIDKGDHYILNGTKNWITNGGTAEFYLVIAQTDREKGHKGINALIVEKGMEGFEIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRV 330
             +NK+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKENKLGIRGSDTHSLNFNDVKVPKENRIGDDGFGFKFAMKTLSGGRIGIAAQALGIAAG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A  Y++ R   G  + +   +   +AD+   I AA  L ++ A   D   +     
Sbjct: 257 AYELAKKYSKERKAFGTEIANHQAIAFKLADMHTKIEAARLLVYKAAKDKDNGDNYDLSG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG+G++++  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASQVAMETSVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            + +   + +
Sbjct: 370 KIVISRSILR 379


>gi|228915131|ref|ZP_04078728.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228844560|gb|EEM89614.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 381

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDEDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|308274691|emb|CBX31290.1| Acyl-CoA dehydrogenase, short-chain specific [uncultured
           Desulfobacterium sp.]
          Length = 384

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 132/364 (36%), Gaps = 28/364 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS-VTS 158
            PA      +    GL   +    +          + A      +      +MS      
Sbjct: 37  FPA--ENCEKMAELGLMGMMIPPEYGGSGTDTISYVLALSEIAYSCASTAVVMSVHNSIV 94

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +      +   + S E                   +TE + G+D  +  +  
Sbjct: 95  CESILRYGSDDQKVRYLKSLASGEM-------------IGAFAMTEPQAGSDPVSQKTSA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K     Y L+G K F+++  +    I+ A  +       +   +      GL   ++++
Sbjct: 142 VKDG-EYYVLNGTKRFITTGKNAGLTIVTAITDSAKKHKGISAFIVVKDTPGLIVGKVED 200

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R + T +L F N       LLG                 +  A  SV   + +L  
Sbjct: 201 KMGLRGSDTCDLVFDNCRVHKDDLLGSEGDGFKIAMSALDGGRIGIAAQSVGVAQAALDA 260

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ Y+ +R   G  +     ++  +A++A ++ AA  L F  A   D+  + + +A+ A 
Sbjct: 261 AVKYSTQREQFGQTISKFQGLRWMVAEMATEVEAARQLMFSAAAMKDKGVNYTLQASMA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  +M   V A+A++  GG G+I+E  + R YR++   +I  G+     + +
Sbjct: 320 ------KLFASEMVNRVTAKALQMHGGYGFIKEYPVERFYRDARVFTIYEGTSEIQKVVI 373

Query: 455 LNLL 458
            N +
Sbjct: 374 SNHI 377


>gi|54020956|ref|NP_001005724.1| acyl-CoA dehydrogenase, short/branched chain [Xenopus (Silurana)
           tropicalis]
 gi|49523138|gb|AAH75324.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus
           (Silurana) tropicalis]
          Length = 361

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 138/373 (36%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           RW K+    P  ++++      GL     D  +            A+    +  +E    
Sbjct: 8   RWSKLWTPIPMDNSVIEGLFELGLMGVEVDPKYGGTG--------ASFFSSILVIEELAR 59

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PSV+    +       + +         E       P           L+E   G+D 
Sbjct: 60  VDPSVSVMCDIQNTLINTLFQR-----LGTEQQKETYLPRLCRDTVGSFCLSEAESGSDA 114

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ +  QK  D         W  +S  +  F+++A      G   +   +      G  
Sbjct: 115 FSLRTSAQKHKDYYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITCFIVPKDTEGFH 174

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             + ++K+G R+++T  L F N        L       +    +  L+   + +S   + 
Sbjct: 175 IGKKEDKLGLRASSTCSLTFDNVKVPESNILGQLGHGYKYAIGM--LNEGRIGISAQMLG 232

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+        Y ++R   G  + D   M+  I+ +A  + A   L++  A   +  +  
Sbjct: 233 LAQGCFDHTIPYTKQRVQFGKRIFDFQGMQHQISHVATQLEATRLLTYNAARLKEAGRDF 292

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EA  A       KY+  ++A    ++ +E +GG GY ++  I ++YR++   +I  G+
Sbjct: 293 KKEACMA-------KYFSSEVACLTTSKCIEWMGGVGYTKDYPIEKYYRDAKIGTIYEGT 345

Query: 447 GNAMVLDVLNLLE 459
            N  +  +  L+E
Sbjct: 346 SNIQLSTIAKLIE 358


>gi|330829884|ref|YP_004392836.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565]
 gi|328805020|gb|AEB50219.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565]
          Length = 380

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 138/375 (36%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    L  R    GLH       ++ V +   AH +   ++   +   
Sbjct: 24  PRASEIDQSNAFP--RDLWPRMGELGLHGITVAEEYDGVNLGYLAHVLVMEQVSRASASV 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T      + P + S E+                L ++E   
Sbjct: 82  GLSYGAHSNLCINQIHRHGTAEQKARYLPPLVSGEH-------------VGALAMSEPGA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    ++  D         W  + P +D F++ A+ +   G   +   + +   
Sbjct: 129 GSDVVSMRLTAEREGDHFVLNGNKMWITNGPDADTFVIYAKTDTSAGPKGISAFIVEAGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R ++T EL F N        L    G V+ +        +  A   
Sbjct: 189 PGFSTAQKLDKLGMRGSSTCELVFDNCRVPQENLLGTLHGGVKVLMSGLDYERVVLAAGP 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y R R   G  + +  +++  +AD+   +A++ AL + +A++ D+  
Sbjct: 249 LGIMQACMDVVLPYVRERKQFGQAIGEFQLVQGKLADMYTRLASSRALVYSVASACDQGH 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++             +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 309 TSRKD-------CAAAILFAAENATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGA 361

Query: 445 GSGNAMVLDVLNLLE 459
           G+       +   L 
Sbjct: 362 GTSEIRRWLIGRELM 376


>gi|219668722|ref|YP_002459157.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219538982|gb|ACL20721.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 382

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 122/373 (32%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P   A   +    GL        +                   A    
Sbjct: 26  PLAPELDKSHEFPM--ATWNKMRELGLTGFPIPEEWGGGGGSYLDFAIIVEELAKACAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + S       M + L  + ++ + +  ++ + E             +     LTE   
Sbjct: 84  AVITSVHTGLGCMSMYLYGSQQLKEKYLERLATGE-------------IIGAYALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D  A+  + +   D      G  +  +  ++  F    + +  +     +  LL +  
Sbjct: 131 GSDAGALRCKAEDRGDHFLVNGGKIFITNGTVATTFCTFVKTDPTQPKGKGITCLLIEKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G   + TVEL F N       +LG++N        +     +     
Sbjct: 191 LPGFTISKPVEKMGMHGSPTVELIFENVKVPKENVLGEINNGFAVAMGLLAGGRITIGAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +L   I+Y + R      L     ++  IAD+A  I AA  L +R A   D  
Sbjct: 251 GLGIAEGALDYTINYIKERQQFDKPLAANQGVQFMIADMATKIEAAQMLIYRAAWLKDHQ 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              ++EA+ A       K +   +A  V    ++ +GG GY  E  + R  R++    I 
Sbjct: 311 LPHNKEASMA-------KLFATDVAMEVTTNCVQLLGGYGYCSEYPVERMMRDAKITQIY 363

Query: 444 LGSGNAMVLDVLN 456
            GS     + +  
Sbjct: 364 EGSNQIQRMIIGR 376


>gi|187922667|ref|YP_001894309.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713861|gb|ACD15085.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 595

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 95/446 (21%), Positives = 166/446 (37%), Gaps = 63/446 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +     + +  G      D  +       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + + + PK+ +  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            + ++ +  SDG Y +SG K F+SS   D       ++LA++ G       +  F+VP+ 
Sbjct: 177 ILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPGAPNGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+L+G+ N     +  M    
Sbjct: 237 VPNEAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    +    ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEIGYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
              AA A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEAARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFESTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG G+I E  + ++ R++  N I  G+     LD+L     G             D+G+
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILG-------------DMGA 463

Query: 479 SGKKVITILRDSISLCKEDKGLARFL 504
             KK   ++ D +        +  F+
Sbjct: 464 KMKKFGKLVSDFVEAEGVKPEMQEFI 489


>gi|111018540|ref|YP_701512.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818070|gb|ABG93354.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 382

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 82/398 (20%), Positives = 146/398 (36%), Gaps = 36/398 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A              P    WD+ +  P    +LR++   G+       
Sbjct: 8   ERAISDTARDFAAE---------HLAPHAVEWDQAKHFPV--DVLRKAASLGMGGIYIRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +    R               +S       M+    T    + W P + S +
Sbjct: 57  DVGGSELTRVDAARIFEQLAKGCPSIAAYISIHNMVTWMIDRFGTDEQRRAWVPGLCSMD 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA++++  +  D  Y L+G K F+S    S+
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQFISGAGTSE 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F +     G L
Sbjct: 163 VYVVMART-GEGGPGGISAFIVPKGSPGLSFGPNEVKMGWNAQPTRQVIFEDVRVPAGNL 221

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  SV G + +L  A+ Y   R   G  L+D   ++  
Sbjct: 222 LGSEGGGFRIAMAGLNGGRLNIAACSVGGAQTALERAVAYLADRKAFGAPLLDSQALQFQ 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  L +R A + ++      E      +  + K +       V   A++ 
Sbjct: 282 LADMRTELEAARTLLWRAAAALEDGAPDVVE------LCAMAKRFATDTGFEVANRALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY+ E  I +  R+   + IL GS   M + +  
Sbjct: 336 HGGYGYLAEYGIEKIVRDLRVHQILEGSNEIMRVVIAR 373


>gi|311772310|pdb|3PFD|A Chain A, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772311|pdb|3PFD|B Chain B, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772312|pdb|3PFD|C Chain C, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 gi|311772313|pdb|3PFD|D Chain D, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
          Length = 393

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 123/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G         +                       A
Sbjct: 40  PYAAEVDEKARFPE--EALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSA 97

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P + S E                   L+E+  G
Sbjct: 98  SLIPAVNKLGTMGLILRGSEELKKQVLPAVASGE-------------AMASYALSEREAG 144

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++     D         W  +   S  + ++A  +   G   +   +      
Sbjct: 145 SDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGISAFMVHKDDE 204

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 205 GFTVGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 261

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ I AA  + +  A   + 
Sbjct: 262 QAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAER 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K +   +A  V  +A++  GG GY ++  + R  R++    I
Sbjct: 322 GEGD------LGFISAASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQI 375

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 376 YEGTNQIQRVVMSRALLR 393


>gi|6978433|ref|NP_037216.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Rattus norvegicus]
 gi|2492630|sp|P70584|ACDSB_RAT RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|1498500|gb|AAB17136.1| short-branched chain acyl-CoA dehydrogenase precursor [Rattus
           norvegicus]
 gi|149061278|gb|EDM11701.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b
           [Rattus norvegicus]
          Length = 432

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 142/371 (38%), Gaps = 35/371 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     G+     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGMMGIEVEAKYGGT--EASFLCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     T      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTVINKLFRKHGTEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAL 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W  ++  ++ F++ A V+   G   +   L D    G    R
Sbjct: 189 KTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTEGFQIGR 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N          V        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPETS---VLGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +        Y + R   G  + D   ++  +A +A  + AA  L++  A   +  +   +
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNAARLVEAGRPFIK 365

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA+ A       KY+  ++A    ++ +E +GG GY ++  + + +R++   +I  G+ N
Sbjct: 366 EASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGTSN 418

Query: 449 AMVLDVLNLLE 459
             +  +   ++
Sbjct: 419 IQLNTIAKHID 429


>gi|290462827|gb|ADD24461.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus
           salmonis]
          Length = 418

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 131/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DKV       A  ++    GL     D  +         H I    +  ++   
Sbjct: 56  PHATEIDKVNEFKDRRAFWKKLGEMGLLGITADPEYGGTGMGYFEHCIAMEEMSRVSGAI 115

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S E+                L ++E   
Sbjct: 116 ALSYGAHSNLCVNQLNRNGNEAQKNKYLPKLCSGEHWG-------------ALAMSEPGS 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D+ ++ +   +  D         W  + P +D  I+ A+ + +       +   + + 
Sbjct: 163 GSDVVSMRTTAIEDGDDYVLNGSKFWITNGPDADILIVYAKTDPKNPKPQHGITAFIIEK 222

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G   + T EL F N       +LGDLN     +     L  L  A 
Sbjct: 223 DMPGFTTGPKLDKLGMCGSNTCELIFDNCRVPKENVLGDLNKGVYVLMSGLDLERLVLAA 282

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA  R      +    +++  +AD+   + +  +  + +  + + 
Sbjct: 283 GPVGIMQATCDVAWSYAHDRKQFSTPIGKFQLIQGKMADMYTTLNSCRSYLYNVGKACNM 342

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++ A   ++       C + +  +  +A++ +GG+GYI +    R  R++    I
Sbjct: 343 GHVSSKDCAGVILL-------CAEKSTLMALDAIQILGGNGYINDYPTGRFLRDAKLYEI 395

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 396 GAGTSEVRRMIIGRAL 411


>gi|319785584|ref|YP_004145060.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171472|gb|ADV15010.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 390

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 146/373 (39%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R+D+ E +         ++   GL C+     +       AH+           ++   +
Sbjct: 39  RYDEFEKNEMVDRESWLKAGSAGLLCASMPEEYGGSGGTFAHESAIIEAIGHVGVDGFGI 98

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +   A  +    +    K W PK+ + E             +   + +TE   G+D+
Sbjct: 99  GLHNSIVAPYILHYGSEDQKKKWLPKLATGE-------------LIGAIAMTEPGAGSDL 145

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP-NG 269
             + ++ QK  +  Y ++G K F+++   ++  I++ + +   G      ++ +     G
Sbjct: 146 QGVKTRAQKDGN-QYKINGSKTFITNGQLANFIIVVTKTDPEKGAKGTSLIVVETDEVEG 204

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSV 325
               R  +KIG ++N T EL F++        L      G V+ M+ L    L     ++
Sbjct: 205 FQRGRNLDKIGLKANDTSELFFNDMRVPTSNLLGHEEGQGFVQLMQQLPQERLQIGTGAI 264

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + +  +LA  I Y + R   G  +ID    +  +A++  +              +++  +
Sbjct: 265 AMIERALALTIDYVKERKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVA 317

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R        + A + KYW   +   V+ E ++  GG GY+ E  IAR +R++    I  G
Sbjct: 318 RHIAGGLDPVTASMAKYWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGG 377

Query: 446 SGNAMVLDVLNLL 458
           +   M L +   L
Sbjct: 378 TNEIMKLLIGRSL 390


>gi|86158090|ref|YP_464875.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774601|gb|ABC81438.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 380

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    PA  A +++    GL        +            A           
Sbjct: 26  PNARRWDRDHEFPA--AAVKQLGEMGLMGVAVPAEWGGAGMDNVSYALAMEEISRGCAGT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS S +      L   T  + K++               P  +        LTE   
Sbjct: 84  GVIMSVSNSLYCDPVLKYGTDALRKEFLE-------------PYARGEKLGCFALTEPMS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +   +  D         +  + P +DA ++ A  +       +   L     
Sbjct: 131 GSDAAEMRTVAVRRGDEYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGISAFLVPTDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    +  +K+G R++ +  L F          L       +  KI +  LD   + ++
Sbjct: 191 RGFSRGKPDDKVGIRASGSCSLFFEGCAIPARYRLG---EEGDGFKIAMGTLDGGRIGIA 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +      EA+ YA+ R   G  +     ++  +AD+A +I AA  L  R A++ D
Sbjct: 248 GQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLADMATEIDAARLLVLRAASAKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                S E+A A       K +  +M+  V ++A++  GG GY++E  + RH+R+S    
Sbjct: 308 RGVRHSAESAMA-------KLFASEMSERVTSKAIQIHGGYGYVKEFDVERHWRDSRITE 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   + KG
Sbjct: 361 IYEGTSEIQRLVISASVLKG 380


>gi|146305933|ref|YP_001186398.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574134|gb|ABP83666.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 379

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 132/375 (35%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           + V FH  W        AL  ++   GL CS     +  +     +            L 
Sbjct: 25  EAVPFHAQWEKDGHVDRALWTKAGEAGLLCSHIPEEYGGMAADFLYSTVVIEEIGRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +    + + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSEAQKQHYLPKLVSGEM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++   +D  I++A+ + + G       L + +
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGWLADLVIVVAKTDPKAGAKGTSLFLVEAN 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G    M+ L    L   + 
Sbjct: 191 TPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQELPQERLTVGVG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  + D    +  +A++A +I        R      + 
Sbjct: 251 ALASAEAALQWTLDYTRERKAFGKAVADFQNTRFKLAEMATEIQVGRVFIDRCLELHLQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K            A + KYW   +   V+ E ++  GG G++ E  IAR + ++    I 
Sbjct: 311 K-------LDVPTAAMLKYWTTDLQCKVLDECVQLHGGYGFMWEYPIARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIISRSL 378


>gi|225025846|ref|ZP_03715038.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353]
 gi|224956831|gb|EEG38040.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353]
          Length = 386

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 132/384 (34%), Gaps = 37/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       + +         + +    L  +    
Sbjct: 28  PLAQEVDETEHFPE--ETVAKMQKLGFMGIPVPKEYGGQGCDPLTYIMCVEELSKVCGTT 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A  +    T    + +               P+ K       GLTE   
Sbjct: 86  GVIVSAHTSLCADPILTYGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPGA 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-----VPRLL 262
           GTD   + ++     D         +  +   +D +I++A                   +
Sbjct: 133 GTDAQGVQTKAVLDGDEWVLNGSKCFITNGSYADYYIIIAITSVDTDARGRKKKKFSAFI 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G  +   + K+G R +AT EL F +     +   N+     +   I ++ LD  
Sbjct: 193 VEKGTPGFTFGTKEKKMGIRGSATYELIFQDCR---IPKENLLGPMGKGFAIAMHTLDGG 249

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +AE      I Y + R   G  +  Q   +  +A++A  + AA  L ++ 
Sbjct: 250 RIGIAAQALGIAEGALDATIAYVKERKQFGRAIAAQQNTQFQLANMATQVEAAKLLVYKA 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +    +  S EAA A       K +  + A  V  + ++ +GG GYI E  + R  R+
Sbjct: 310 AMAKATQRVYSVEAAKA-------KLFAAETAMDVTTKCVQLLGGYGYIREYDVERMMRD 362

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     + +   L K
Sbjct: 363 AKITEIYEGTSEVQRMVISGNLLK 386


>gi|87198880|ref|YP_496137.1| butyryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134561|gb|ABD25303.1| Butyryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 380

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 142/401 (35%), Gaps = 27/401 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+     +  MA   T    A  P   +WD+    P     ++ +   G        
Sbjct: 4   QFALTEDQIAIQDMARRFTA--DAITPFAAQWDEDHTFP--RDTIKAAAELGFAAIYVSE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +                    +S    +A M+       +   + P + + +
Sbjct: 60  ESGGIGLGRLEAALIMEAMAYGCPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMD 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D AA+ +  +   D  Y ++G K F+S    + 
Sbjct: 120 Q-------------IASYCLTEPGSGSDAAALKTTARLEGDH-YVVNGTKQFISGGGVND 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +     G  G   +  L+ +    G+ +   + K+G  ++ T ++ F N    +   +
Sbjct: 166 LYVTMVRTGDNGAKGISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRV 225

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    L+    S+ G +  L EA+ Y + R   G  + +    +  +
Sbjct: 226 GAEGDGFKFAMAGLDGGRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ A+ AL +  A         +  A      + + K        +++  A++  
Sbjct: 286 ADMATDLEASRALLYLAAAKV------TANAPDKTRFSAMAKKLATDNGSSIVDRALQMF 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY+ +  I R +R+   + IL G+   M + V   L K
Sbjct: 340 GGYGYLRDYPIERFWRDLRVHRILEGTNEVMRMIVGRDLLK 380


>gi|148553574|ref|YP_001261156.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498764|gb|ABQ67018.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 381

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 134/398 (33%), Gaps = 34/398 (8%)

Query: 68  CTAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+AR   A+  TP           WD+    P     ++ +   G           
Sbjct: 12  RAIQEMARKFTADAITP-------HAAEWDEKHIFP--RETIQAAAALGFGGIYVSEEAG 62

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +   +                    +S    +A M+    +  +   + P + +     
Sbjct: 63  GIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDRFGSDDLKGRYLPDMIACRRMG 122

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           LTE   G+D AA+ ++  +  D         +      ++ +++
Sbjct: 123 -------------SYCLTEPGSGSDAAALKTRAVRDGDDYVVSGSKAFISGGGENEVYVV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV- 304
           + +  G  G   +  L+ D    G+ +   + K+G  S  T ++ F      +   +   
Sbjct: 170 MVRT-GEDGPKGISCLVIDKDMPGVSFGAQEKKLGWHSQPTAQVNFDGVRVPVANRVGGE 228

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    M  L    L+    S+ G +  L E++ Y R R   G  + D   ++  +AD+
Sbjct: 229 GEGFRIAMMGLDGGRLNIGACSLGGAQRCLDESVSYTRERKQFGQPIADFQSIQFTLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ AA  L +  A                   A + K +      AV+  A++  GG 
Sbjct: 289 ETELQAARMLLYAAAAKVTANAPDK------TRFAAMAKRFATDTGSAVVDRALQLHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+ +  I R +R+   + IL G+   M +     L +
Sbjct: 343 GYLRDYPIERFWRDLRVHRILEGTNEIMRMITSRELLR 380


>gi|21356377|ref|NP_650840.1| Arc42 [Drosophila melanogaster]
 gi|7300557|gb|AAF55709.1| Arc42 [Drosophila melanogaster]
 gi|21430902|gb|AAM51129.1| SD24551p [Drosophila melanogaster]
          Length = 405

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 145/378 (38%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NAAKFDREHLYPE--KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W  ++  ++A I+ A    ++    +   +   +  
Sbjct: 154 SDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATK 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G R ++T +L F +    ++   N+   P    KI +  LD+  + ++G
Sbjct: 214 GFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAG 270

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 331 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 383

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 384 YEGTSEIQRLVIAGSILK 401


>gi|229085424|ref|ZP_04217665.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228697900|gb|EEL50644.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 371

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 21  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTLSYALAVEEIGRACGGTGLSYA 78

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 79  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 125

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 126 GTQTKAFLDGDE-YVISGEKCWITNAEYANTIIVTAINGVEENGKKRISAFIVPTNSEGL 184

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+   +       +LGD+N              +  A ++V  
Sbjct: 185 TISSPYDKMGVRASNTCEIVLDSVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 244

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 245 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDHDKPFG 304

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 305 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 357

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 358 EIQRLVIARHL 368


>gi|187922466|ref|YP_001894108.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713660|gb|ACD14884.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 376

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 136/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P    WD+    P    + R+    G +  +   ++                    
Sbjct: 20  EAITPHAAVWDRERTFP--KDVHRQLAELGAYGVLVPEAYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        +DW               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLTYGNDAQKRDWL-------------TPLARGEMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +  D  Y L+G K F++S  +    I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGNVAIVMAVTDKAAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G    R+++K+G  S+ T ++ F +       L+G                 + 
Sbjct: 184 VPTDTKGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIGAEGEGYRIALSGLEGGRIG 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  A+ 
Sbjct: 244 IAAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQFRLADMATQLEAARQLIWHAASL 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+   
Sbjct: 304 KDAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRV 356

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+ +   + +   L
Sbjct: 357 CQIYEGTSDIQKILIARGL 375


>gi|84687656|ref|ZP_01015530.1| FadE25_4 [Maritimibacter alkaliphilus HTCC2654]
 gi|84664333|gb|EAQ10823.1| FadE25_4 [Rhodobacterales bacterium HTCC2654]
          Length = 385

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 148/378 (39%), Gaps = 25/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+ +  P  H+L+      GL   +    +            A      A    
Sbjct: 28  PIAAKIDQEDDMP--HSLVPIFGDLGLIQIMVPEEYGGPGGTLTMACIAKEEVSRASFAV 85

Query: 149 GHL-MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            HL  + S+  A  +    T    + + P+I              +      +GLTE + 
Sbjct: 86  SHLVGATSIAMALPLTHYGTDAQRQKYLPEI-------------AEGRTLTCIGLTEPQT 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D++ I +  ++  D  Y ++G K F++ +  +   ++ A+     G   +   +    
Sbjct: 133 GSDVSGIKTTAKRDGDD-YVINGQKVFITKADQAKYILLFARTSEGKGHDGISSFIVPMD 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+       K+G R     +L F N       L+G+          +  L        
Sbjct: 192 SPGVKIGGSPKKMGLRGIKNCDLFFENVRVPAENLVGEEGQGFKNAMGVLNLNRPTVGAA 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L  A+ YA+ R   G  + +  +++  +AD+A+ I AA AL +++A   D  
Sbjct: 252 SVGIAQGALDAAMAYAKEREQFGQPIGNFQLVQAMLADMAIQIEAARALLYKVAAFIDRD 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +  +      + + + K +   MA  V  +A++  GG+GY+++  + R+ R++    I 
Sbjct: 312 PTHPQ----VPMYSSMIKTFASDMAMKVTTDAVQVFGGAGYLQDHPVERYMRDAKVCQIY 367

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+     L +   + KG
Sbjct: 368 EGTNQIQRLIIARAMLKG 385


>gi|328771985|gb|EGF82024.1| hypothetical protein BATDEDRAFT_86757 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 411

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 141/405 (34%), Gaps = 36/405 (8%)

Query: 61  LGEYVLSCTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           LGE   +   Q +AR  A+        +      WD+ E  P     L ++   G     
Sbjct: 38  LGEE--TKEYQLVARSFADKELAPNMTH------WDETETFP--REALSKAARLGFGAIY 87

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F      +              +     +S     A M+         + + P + 
Sbjct: 88  CKDDFGGTGLGRLDSSVIFEALSTGCVSTTAYLSIHNMCAWMIDTFGNTAQREKYMPLLA 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
           S E                   LTE   G+D  ++ +   K  D  Y L+G K F+S   
Sbjct: 148 SME-------------KLASYCLTEPGAGSDAGSLATSAVKKGDH-YILNGSKAFISGAG 193

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
            +D ++++A+  G  G   +   + +    GL + + + K+G  S  T  +   +     
Sbjct: 194 DTDVYVIMART-GGPGPKGISCFIVEKGTPGLSFGKKEKKVGWNSQPTRAVILEDCAIPA 252

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G      G          ++ A  S+ G + +L   + Y   R      L     +
Sbjct: 253 ANLVGKEGQGFGIAMRGLNGGRINIASCSLGGAQAALETTVDYVTIRQQFNKPLSANQTV 312

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++A  + ++  L    A   D      E AA A     + K         +  +A
Sbjct: 313 QFKLAEMATSLESSRLLVREAARLVD------ENAASAPAWCAMAKLHATDSCFTIANDA 366

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GY++E  + ++ R+   + IL G+   M L +   L K
Sbjct: 367 LQLHGGYGYLKEYKVQQYVRDLRVHQILEGTNQVMRLVISRELLK 411


>gi|313676142|ref|YP_004054138.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942840|gb|ADR22030.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 379

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 128/370 (34%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D  E  PA    +++    G    + D  +        ++ +    +  +    +  +  
Sbjct: 32  DTHEKFPA--EQIKKMGELGFMGMMVDPKYNGGGMDTVSYVLAMEEISKVDSSASVAMSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T    + +  ++ + E             +     L+E   G+D  +
Sbjct: 90  NNSLVCWGLEKYGTEEQKEKYLKRLATGE-------------ILGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +  +   D         W  +   +  ++++AQ +   G   +  L+ +    G    
Sbjct: 137 QRTTAEDKGDYYLVNGTKNWITNGNSASVYLVIAQTDKEKGHKGINALIVERETEGFVVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM--KILIYLDSAIMSVSGMRV 330
           + + K+G R + T  L F +        +     G    M       +  A  ++     
Sbjct: 197 KKEEKLGIRGSDTHSLMFQDMKVPKENRIGEDGFGFNFAMSTLNGGRIGIAAQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  +     +   +AD+A  I  A  L  + A   D+ +  S+ +
Sbjct: 257 AYELALKYSKERKAFGKEISQHQAIAFKLADMATQIETARLLCLKAAWLKDQKQDFSQAS 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG G+++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASQVAMDTTVEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            + +   + K
Sbjct: 370 KIVISRNILK 379


>gi|49477755|ref|YP_036653.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218903676|ref|YP_002451510.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|228927603|ref|ZP_04090655.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|49329311|gb|AAT59957.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218538372|gb|ACK90770.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|228832083|gb|EEM77668.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +  ++ S                    GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYLVQMASG-------------KTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|170691621|ref|ZP_02882786.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143826|gb|EDT11989.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 376

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 28/376 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P    WD+    P    + R+    G +  +    +                       
Sbjct: 23  TPHAAAWDRERTFP--KEVHRQLAELGAYGVLVPEEYGGAGMDALALALILEEIAAGDGG 80

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +S +      + L        +DW               P+ +  +     LTE +
Sbjct: 81  TSTAISVNNCPVCSILLSYGNDAQKRDWL-------------TPLARGEMLGAFCLTEPQ 127

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D +A+ +   +  D  Y L+G K F++S   ++  I++A  +   G   +   +   
Sbjct: 128 AGSDASALRTTATRDGDA-YVLNGVKQFITSGKNANVAIVMAVTDKAAGKRGISAFIVPT 186

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    RL+ K+G  S+ T ++ F +       L+G                 +  A 
Sbjct: 187 DSKGYLVARLEEKLGQHSSDTAQIIFDDCRVPAANLIGAEGEGYRIALSGLEGGRIGIAA 246

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  A+  D 
Sbjct: 247 QSVGMARAAFEAALSYAKERESFGQPLFSHQAVQFRLADMATQLEAARQLIWHAASLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+     I
Sbjct: 307 GQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   + +   L
Sbjct: 360 YEGTSDIQKILIARGL 375


>gi|254469198|ref|ZP_05082603.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211961033|gb|EEA96228.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 379

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 139/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD     P    +LR++   GL               +              +  
Sbjct: 26  PFAAEWDAKSHFPL--DVLRKAAALGLGGLYVREDVGGSQLGRLDGALIFEELSKGCVST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+    +  + + + P + S E                   LTE   G
Sbjct: 84  SAFLSIHNMAAGMLDRFGSDELRQRFLPDLCSME-------------KVASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  +  D  Y ++G K F+S   +SD ++ + +  G  G   +  ++ +   
Sbjct: 131 SDAASLRTRAVRDGDH-YVINGSKSFISGGGVSDVYVCMVRT-GEDGPKGISCIVVEKDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   ++K+G  S  T ++ F +       L+G                 L+    S
Sbjct: 189 PGLSFGANEHKLGWCSQPTAQVIFEDCRVPVANLVGAEGQGFSIAMAGLDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G +  L  A+ Y   R   G  L     ++  +AD+A ++ AA  L  + A   D   
Sbjct: 249 LGGAQFCLDRALQYMDERKQFGRSLAQFQALQFKVADMATELEAARLLLHKAAYMLDRKD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +         MA + K         V+ EA++  GG GY+++  + RH R+   + IL 
Sbjct: 309 PQ------VTKMAAMAKRLATDTGFKVVNEALQIHGGYGYLKDYPLERHLRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+   M + V   L K 
Sbjct: 363 GTNEIMRVIVARELMKA 379


>gi|58332612|ref|NP_001011380.1| isovaleryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|56788857|gb|AAH88561.1| isovaleryl Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 419

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 134/379 (35%), Gaps = 28/379 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+        +  ++    G+        +         H +    +   +
Sbjct: 56  HLNPVANEIDQKNNFAEMRSFWKKLGELGVLGITAPVEYGGSAMGYLEHVLVVEEISRAS 115

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         + + PK+ S EY                L ++E
Sbjct: 116 AAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMSE 162

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV--GCFLVPRL 261
              G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++  + +         +   
Sbjct: 163 PNSGSDVVSMRLKAEKKGD-YYVLNGNKFWITNGPDADVLVVYVKTDPSAQPASHGITAF 221

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L +    G    +  +K+G R + T EL F +        L      V  +   + L+  
Sbjct: 222 LVEKGMPGFSTAQKLDKLGMRGSNTCELVFEDCKIPEQNVLGHLGKGVYVLMSGLDLERL 281

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S   +  M+  L  AI Y   R   G  +    +M+  +AD+   +AA     + +A 
Sbjct: 282 VLSGGPLGIMQAVLDHAIPYLHTREAFGQKIGHFQLMQGKMADMYTRLAACRQYVYNVAK 341

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+    S++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 342 ACDQGHFNSKD-------CAGVILYSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAK 394

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     + +   
Sbjct: 395 LYEIGAGTSEVRRMLIGRA 413


>gi|163748947|ref|ZP_02156198.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161331323|gb|EDQ02211.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 585

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/512 (18%), Positives = 190/512 (37%), Gaps = 62/512 (12%)

Query: 34  MNAYSSDSL----LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P      L  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYQAPLAEMKFLLDKVFDAPQTW-ASLPAIAENVDMDTAVAIMDEADKISRELLHPIN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + DKV     +     +    G      +  F  +   +   +    +  
Sbjct: 60  RSGDEQGVVHQDDKVITPDGYKEAYTQYAEGGWVGLCGEPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             +  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSDELKQKYLPMMYSGEW-------------SGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--RVGC 255
           TE + G+D+  I ++   + DG Y ++G K F+++   D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITAGDHDLTENVIHLVLAKLPDSNGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  D     G  N +    +++K+G ++++T  + + +  G+L+G  N     + 
Sbjct: 227 FLVPKIKVDDSGALGESNHVTVGSIEHKMGLKASSTCVMNYDDAQGYLIGRANRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +I +   A  ALS       D     E +++++ + Y  ++ P+ K +           
Sbjct: 347 LNIRVLTEAGRALSVLTGQQLDIAKYGEGEAQAKASRYVGLLTPVAKAFLSDRGLDAAIT 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE-------- 466
           A +  GG GYI E  I +  R++    I  G+     +D L     G  +          
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDKVAALTEFVNEC 466

Query: 467 -QLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               +TL     +   KV  +L+  I +  E 
Sbjct: 467 TAKLATLSHADAAHKAKVTDLLQQLILVASEI 498


>gi|47570205|ref|ZP_00240858.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|47553111|gb|EAL11509.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+   +       +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDSVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|304408833|ref|ZP_07390454.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307302836|ref|ZP_07582591.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304352654|gb|EFM17051.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306913196|gb|EFN43618.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 585

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 101/489 (20%), Positives = 184/489 (37%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKAVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRNIRTRALPQDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +        NG+    +++K+G + +AT  + F N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLANANGVSVGSIEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVA 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|260577623|ref|ZP_05845560.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258604228|gb|EEW17468.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 389

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 128/377 (33%), Gaps = 21/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  +  D+ E  P     L      G +       +          +         
Sbjct: 29  QQIAPHAKDVDEEERFP--QEALEALNAAGFNAIHVPEEYGGQGGDSLAAVIVIEEVARV 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +      + L  +  + K+  P I +                     LTE
Sbjct: 87  CGSSSLIPAVNKLGTMGLILQGSEELKKEVLPDIANG--------------AMASYALTE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D  A+ ++  +  D         +  +   S  + ++A  +   G   +   + +
Sbjct: 133 REAGSDAGAMKTRAVRDGDEWVINGSKCFITNGGKSTWYTVMAVTDPEAGARGISAFMVN 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G      ++K+G + + T EL F +       ++G+                    
Sbjct: 193 KDDPGFSVSGYEHKLGIKGSPTAELLFEDCRVPASRMIGEEGTGFKTALQTLDHTRPTIG 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +  +A+ Y + R   G  + D    +  +AD+ + I AA  + +  A++ +
Sbjct: 253 AQALGIAQGAFDQAVAYVKERKQFGKAIADFQNTQFMLADMKMKIDAARLMIYTAASNAE 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+ A   +MA  +K +   +A  V  +A++ +GG G+  +  + R  R++    
Sbjct: 313 RG--VAEDGAKLGLMAAGSKAFASDVAMEVTVDAVQLLGGYGFTRDFPLERMMRDAKITQ 370

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 371 IYEGTNQICRMVMGRQI 387


>gi|149191207|ref|ZP_01869464.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
 gi|148834956|gb|EDL51936.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
          Length = 384

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 138/382 (36%), Gaps = 27/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    +L+++   G            +   +           M     
Sbjct: 26  PNAAQWDEECIFP--KDVLKQAGELGFLALYTPEQEGGLGLSRLDSSIVFEKLSMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+       M+A   T    + + P + S ++                  LTE   G
Sbjct: 84  TAFMTIHNMVTWMIASFATDEAKRAFCPSLISGDW-------------LGSYCLTEATAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +   +  D  Y ++G K F+S    +D  +++A+  G  G   +   +     
Sbjct: 131 SDAASLLTTATRQ-DDSYIINGSKAFISGGGETDVLVVMART-GETGAKGISAFVVPAHC 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
           +G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S
Sbjct: 189 DGISYGRKEPKMGWNSQPTRAITFDNVVVPATYRLGEEGQGFTFAMKGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L +A  Y   R   G  L     ++  +AD+A ++ AA  +    A   D   
Sbjct: 249 VGTAQHALNQAAQYLHERKQFGRSLSQFQALQFKLADLATELVAARQMVRLAAFKLDNQH 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +   +   V    ++  GG GYI+E S+ RH+R+   + IL 
Sbjct: 309 PD------ATTYCAMAKRFATDVGFNVCDGVLQLFGGYGYIKEYSLERHFRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKGTNLFE 466
           G+   M + +   +       E
Sbjct: 363 GTNEIMRMIIARRVLSDAFAIE 384


>gi|327441463|dbj|BAK17828.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 134/363 (36%), Gaps = 30/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             LL +    GL        +        ++ I    L  ++ +    L   +    + +
Sbjct: 38  RHLLTKMGELGLMGITAPDEYGGAEMDFTSYIIAIHELSKVSAVMGVILSVHTSVGTNPI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E                   LTE   G+D  ++ ++  +  
Sbjct: 98  LYFGNEEQRKKYVPKLASGE-------------SIGAFCLTEPSAGSDAGSLKTRAVRDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +         +  +   +D +I+ A  +   G   +   + + +  GL   + + K+G  
Sbjct: 145 EHYVLDGAKVFITNGGEADVYIVFASTDPEAGSRGISAFIVEKNTPGLIIGKDERKMGLH 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAI 336
            + TV+L F N         N+     +  KI L  LD   + ++   + +       A 
Sbjct: 205 GSRTVQLTFENMRVPA---ENLLGQVGDGFKIALANLDVGRIGIAAQSLGIAEAALEAAT 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +  Q  +   +AD+A  + A+  L +R AN   E  S  +EA+ A   
Sbjct: 262 AYAKERIQFGKPIAQQQGVGFKLADMATAVEASKLLVYRAANMRSEGLSCGKEASMA--- 318

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  + A     EA++ +GG GY E+  + R++R++    I  G+     + +  
Sbjct: 319 ----KLFASQTAMDTAIEAVQILGGYGYTEDYPVERYFRDAKVTQIYEGTSEIQRIVISK 374

Query: 457 LLE 459
            + 
Sbjct: 375 HVM 377


>gi|325277409|ref|ZP_08143027.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
 gi|324097453|gb|EGB95681.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
          Length = 387

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVSEEYGGAGLGYLAHVVSMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSHAQKLKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F N        L    G V  +   +  +  ++S   
Sbjct: 196 PGFSRSNKFDKLGMRGSNTCELFFDNVEVPEENMLGQLNGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|316933290|ref|YP_004108272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315601004|gb|ADU43539.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 382

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 140/380 (36%), Gaps = 25/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ +  P    ++R +   G+               +             
Sbjct: 23  EKIAPHALKWDEDKHLPL--DVIREAAALGIGGIYIRDDVGGSAMTRFDAALIFEALATG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +A M+    +    + W PK+ S E                   LTE
Sbjct: 81  CPAVSAFISIHNMAAWMIDSYGSDAQRQRWLPKLCSMEQ-------------VASYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L+ D
Sbjct: 128 PGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGGDGPGGISTLVVD 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T  + F N    +   LGD  +             L+  
Sbjct: 187 KDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIG 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L +R A + D
Sbjct: 247 ACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +       A  +  + K +       V  EA++  GG GY+ E  I +  R+   + 
Sbjct: 307 RKDAN------ATKLCAMAKRFATDAGFNVANEALQLHGGYGYLAEYGIEKLVRDLRVHQ 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL G+   M L V   L + 
Sbjct: 361 ILEGTNEIMRLIVSRKLLEA 380


>gi|254417897|ref|ZP_05031621.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196184074|gb|EDX79050.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 387

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 129/360 (35%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++  DGL           +     H++   R       +   +   +   A  + 
Sbjct: 48  RDLWSQAGADGLLGLSMPEEDGGMGGDYRHEVVLMRQLGWKGADHFGISLHNAIVAPYIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P++ S E             +   + +TE   G+D+  + +   K  +
Sbjct: 108 HYGTEEQKARWLPRLQSGE-------------LVGAIAMTEPGAGSDLQGVKTTAVKSGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNR 282
           G        +  +  +++  I++A+ +   G      ++ +     G    R  +KIG  
Sbjct: 155 GYVVNGSKTFITNGQLANFIIVVAKTDPAEGAKGTSLIVVETDGAEGFERGRNLHKIGME 214

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            N T EL F++        +      G V+ M+ L    L+ A+  V+     L   + Y
Sbjct: 215 GNDTSELFFNDVKVPGDNIIGGAEGQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLAY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +ID    +  +A++   +  A            + +  +  A+ A     
Sbjct: 275 VKERKAFGKRVIDFQNTQFKLAEVKTKLTVAKVFVDHCIGLHLKGQLDAATASMA----- 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KYW   +    I E ++  GG GY+ E +IA+ Y+++    I  G+   M L +   L
Sbjct: 330 --KYWVTDIQGETIDEMLQLHGGYGYMNEYAIAQLYKDARVQRIYGGTNEIMKLLIARTL 387


>gi|229017861|ref|ZP_04174744.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|229024064|ref|ZP_04180538.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228737242|gb|EEL87763.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228743452|gb|EEL93569.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  + G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAINGVEDNGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TITSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKTISNFQAIQFKLADMATEVELARNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +   A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANHAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|167566097|ref|ZP_02359013.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 398

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 132/377 (35%), Gaps = 22/377 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGAGLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKRKYLPKLISGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  +         W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADKRGERYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   I Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYTVGRHLDAGG 316

Query: 385 SRSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + S   A+ R           +  + A  +  EA++ +GG+GYI E  + R +R++    
Sbjct: 317 TASAGGAHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYE 376

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 377 IGAGTSEIRRMLIGREL 393


>gi|24216326|ref|NP_713807.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656481|ref|YP_000567.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24197600|gb|AAN50825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599716|gb|AAS69204.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 437

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 149/410 (36%), Gaps = 37/410 (9%)

Query: 63  EYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           E+ LS   +EL  +A         P+   +   GE       +P   A+L+++   GL  
Sbjct: 52  EFALSSEQKELRDLARKFAKEEIRPKAEHHDHTGE-------YPL--AVLKKAWEIGLMN 102

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +  F     ++   +                +  +  + + V L    R+ K++   
Sbjct: 103 IHIEPRFNGAGMQELDDVIIGEELFWGCSAMATAILANNLALAPVLLGANDRIKKEFV-- 160

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                       PM +        +TE   G+D+AAI +  +K+ D         W  ++
Sbjct: 161 -----------QPMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDEYILNGSKMWITNA 209

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +D F +L + +   G   +   + D    G+   + +  +G + + T  + F +    
Sbjct: 210 GYADWFFVLTKTDPSAGHKGITGFIVDSKTPGIIMGKKEINMGQKCSDTRGITFEDVKVP 269

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              ++G                    AI +V   R ++  +I YA  R+  G  +++   
Sbjct: 270 AWQMIGREGEGFKIAMGAFDHTRPGVAIGAVGVARAAMEHSIQYANTRNTFGRPIMENQG 329

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   IA++A DI A   L ++ A   D     +         A I K +C  M   V  +
Sbjct: 330 ISFMIAEMARDIEAGRLLCYQAAWMIDNGFRNT-------YQASIAKMFCADMCMRVCTD 382

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           A++ +GG G+  E  + +  R++    I  G+     + V   L  G  +
Sbjct: 383 AVQVLGGYGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 432


>gi|115526303|ref|YP_783214.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520250|gb|ABJ08234.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
          Length = 390

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 141/396 (35%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  +  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRETVRDFAFNEIAPRADEIDKSNTFP--RDLWPKLGAVGLHGITVEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H +    +   +        + S    + +    +    + + PK+ S E+  
Sbjct: 70  AGLGYLEHCLAVEEISRASASVGLSYGAHSNLCINQMRRNGSEAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRYVLNGNKMWITNGPVAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   + +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPAAGARGITAFIVEKGMKGFSTAQKLDKLGMRGSDTGELVFVDCEVPEENVLGQV 236

Query: 306 TGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +        +  A   +  M+  L   + Y   R   G  +    +++  IAD+
Sbjct: 237 GRGVNVLMSGLDYERVVLAAGPLGIMQACLDVVMPYVHERKQFGEPIGSFQLVQGKIADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGETTREDAAGA-------ILYASEKATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|306820875|ref|ZP_07454495.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550989|gb|EFM38960.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 379

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 126/359 (35%), Gaps = 26/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++I  G         +  V   +           +A       +S S      V 
Sbjct: 39  KEMYDKAIEQGYTALEVPAEYGGVGLSRVDIAALLEEMAIADAGFATTISASGLGMKPVL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +       K     I +  +                  LTE   G+D +A  +   K  D
Sbjct: 99  IAGNEEQKKKVCEIILNGGF--------------AAFALTEPGAGSDASAGKTTAVKDGD 144

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D +++ A  +   G   +   L +    GL     ++K+G R
Sbjct: 145 -SYVLNGRKCFITNAEVADVYLITAMTDKEAGVKGISMFLVEKGTPGLSTGNHEDKMGIR 203

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T ++   +        +     G    MK L         ++    + +L EAI Y 
Sbjct: 204 TSNTADVVLEDCRIPAANLVGKEGEGFKIAMKTLDQARTWMGCVATGIAQRALDEAIAYT 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +I    M+   AD+ + I  A  +        D   + S E+A       I
Sbjct: 264 KERKQFGKPIIKNQAMQFKFADMQIKIETARQMVAHSLTKMDMGLNFSMESA-------I 316

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +   +A  V ++ ++  GG GY  E  + +  R++    I  G+   + + V N +
Sbjct: 317 AKCYASDIAMEVASDGIQAFGGYGYSREYPVEKLLRDAKIFQIFEGTNEILRIVVSNNI 375


>gi|228933834|ref|ZP_04096680.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228825906|gb|EEM71693.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 132/371 (35%), Gaps = 29/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           +DK    P  +   ++    GL    +   +        ++ +    +            
Sbjct: 31  YDKTAEFP--YETFQKMGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGTGLSYA 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     AS +    T    + +               PM         GLTE   G+D  
Sbjct: 89  ATISLGASPIYYFGTEEQKQKYL-------------VPMASGKTLGAFGLTEPNAGSDAG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGL 270
              ++     D  Y +SG K ++++      I++  V G    G   +   +   +  GL
Sbjct: 136 GTQTKAILDGDE-YVISGEKCWITNAEYANTIIVTAVNGVEENGRKRISAFIVPTTSEGL 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 +K+G R++ T E+           +LGD+N              +  A ++V  
Sbjct: 195 TISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAALAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A+ YA+ R   G  + +   ++  +AD+A ++     L  + A   D  K   
Sbjct: 255 AQSAFERALQYAKERQQFGKAISNFQAIQFKLADMATEVELTRNLVHKAAWLKDNDKPFG 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I  G+ 
Sbjct: 315 KEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEIGEGTS 367

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 368 EIQRLVIARHL 378


>gi|154484667|ref|ZP_02027115.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC
           27560]
 gi|149734515|gb|EDM50432.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC
           27560]
          Length = 385

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 140/385 (36%), Gaps = 38/385 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       + +         + +    L  +    
Sbjct: 26  PLAQETDENEQFPV--ETVEKMAKYGFLGIPVPKEYGGQGCDPLTYAMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T  + K +               P+ K       GLTE   
Sbjct: 84  GVIVSAHTSLCIDPIMTFGTEELKKKYV-------------VPLAKGEKLGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQ-KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCFLVPRL 261
           GTD     ++     +   + L+G K F+++   +D +I++A              +   
Sbjct: 131 GTDAQGQQTKAVFDEATNEWVLNGSKCFITNGKYADVYIVIAVTGKVEKRGRMMKEISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + +    G  +   + K+G R +AT EL F +         N+     +   I ++ LD 
Sbjct: 191 IVEKGTPGFTFGTKEKKMGIRGSATYELIFEDCRIPA---ENLLGKKGKGFNIAMHTLDG 247

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + LAE      I Y + R   G  +      +  +AD+A  + AA  L ++
Sbjct: 248 GRIGIAAQALGLAEGALETTIEYVKERKQFGRSIGQFQNTQFQLADMATKVEAAKMLVYK 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +    K+ S EAA A++ A        ++A  V  +A++  GG GYI E  + R  R
Sbjct: 308 AAMAKATQKTYSFEAAQAKLCAA-------EVAMEVTTKAVQLHGGYGYIREYDVERMMR 360

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+     + +   L K
Sbjct: 361 DAKITEIYEGTSEVQRMVISANLLK 385


>gi|108800151|ref|YP_640348.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869279|ref|YP_939231.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126435776|ref|YP_001071467.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|296165239|ref|ZP_06847786.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|108770570|gb|ABG09292.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695368|gb|ABL92441.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126235576|gb|ABN98976.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
 gi|295899428|gb|EFG78887.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 78/411 (18%), Positives = 139/411 (33%), Gaps = 40/411 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             ++ EL  L +      + ELA  AN    Q H         D+         L  R+ 
Sbjct: 7   PWMNAELLELRDLAAKFFSAELAPHANRFADQHH--------VDR--------ELWNRAG 50

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +    T  + 
Sbjct: 51  ELGLLCMSIPEEYGGGGGTFAHEAVVLEEQARIGDSSWGAGLHSGIVAHYILQYATEELR 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W PK+ S E                 + +TE   G+D+ ++ ++     D        
Sbjct: 111 AQWLPKMASGEM-------------IGAIAMTEPGTGSDLQSVKTKALLDGDEYVITGSK 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R   T EL F
Sbjct: 158 TFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRGQDTSELFF 217

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L      G ++ M  L    L  A+ +V+ M ++L + + Y R R   G 
Sbjct: 218 DEVRVPRSHLLGQSEGQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKYTREREAFGR 277

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A+ A +   A        +     +   +  A A+        W  + 
Sbjct: 278 PVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQTVAMAKW-------WTTER 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V+ + M+  GG GY+ E  I+R + +     I  G+   M   +   L
Sbjct: 331 AMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVMKEIISRSL 381


>gi|86137376|ref|ZP_01055953.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85825711|gb|EAQ45909.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 593

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 102/549 (18%), Positives = 203/549 (36%), Gaps = 76/549 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           ++   +  +++LE       +   +E  ++++     L+      G + +   V     +
Sbjct: 21  VSEAATPGYEDLER---DFTAAILEEAGKISSEVLHPLNTVGDQEGCKLENGLVSTPTGF 77

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A   +    G         +               ++  A          +  +A+ + 
Sbjct: 78  KAAFEQVKEGGWTGLDMPEQYGGQNMPYVLGTAVGEMFSSANQAFVMYQGLTHGAAAAIL 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +    + PK+ S E+  T             + LTE   GTD+  + ++ +   D
Sbjct: 138 AHGTDQQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDD 184

Query: 224 GIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGSP--- 267
           G Y +SG K F+S+   D       ++LA++ G       V  F+VP+ +  EDG+P   
Sbjct: 185 GSYKVSGQKIFISAGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFVLNEDGTPGPR 244

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           NG+    ++ K+G   N+T  + +    G+LLGD +     +  M     L   +  VS 
Sbjct: 245 NGVSVGNIEKKMGIHGNSTCVMNYDEATGYLLGDAHKGMRAMFTMMNEARLGVGMQGVSQ 304

Query: 328 MRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSF 374
              +   A+ YA+ R   G               LI  P ++R++ D    +    A   
Sbjct: 305 AEAAYQNAVEYAKDRLQ-GRDVTGVKNPDGPADPLIVHPDIRRSLMDQKSFVEGGRAFLL 363

Query: 375 RLANSFDEAKSRS--EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             +   D+A      +      ++ P+ K +       +  +A +  GG GYIEE  +++
Sbjct: 364 WGSTMIDQAHRDGNKDADGLVSLLTPVIKGFLSDEGYDMTVKAQQVYGGHGYIEEHGMSQ 423

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R++    I  G+     LD++                  +     GK ++       S
Sbjct: 424 YTRDARIAQIYEGANGVQALDLVG----------------RKLAVDGGKHLMGFFELVKS 467

Query: 493 LCKEDKGLARFLTE-KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
            CK++  L    T+  IA   +A+   +A     +  F++N       + +  L G ++ 
Sbjct: 468 FCKDNAELNEDYTKSFIAPLKAASKDLQAA----SMYFMQN----GMKNPNNALSGSYDF 519

Query: 552 AHIIDSLYL 560
            H+   + L
Sbjct: 520 MHMFGHVCL 528


>gi|111024023|ref|YP_706995.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823553|gb|ABG98837.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 82/398 (20%), Positives = 146/398 (36%), Gaps = 36/398 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A              P    WD+ +  P    +LR++   G+       
Sbjct: 8   ERAISDTARDFAAE---------HLAPHAVEWDQAKHFPV--DVLRKAASLGMGGIYIRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +    R               +S       M+    T    + W P + S +
Sbjct: 57  DVGGSELTRVDAARIFEQLAKGCPSIAAYISIHNMVTWMIDRFGTDEQRRAWVPGLCSMD 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA++++  +  D  Y L+G K F+S    S+
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQFISGAGTSE 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F +     G L
Sbjct: 163 VYVVMART-GEGGPRGISAFIVPKGSPGLSFGPNEVKMGWNAQPTRQVIFEDVRVPAGNL 221

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  SV G + +L  A+ Y   R   G  L+D   ++  
Sbjct: 222 LGSEGGGFRIAMAGLNGGRLNIAACSVGGAQTALERAVAYLTDRKAFGAPLLDSQALQFQ 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  L +R A + ++      E      +  + K +       V   A++ 
Sbjct: 282 LADMRTELEAARTLLWRAAAALEDGAPDVVE------LCAMAKRFATDTGFEVANRALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY+ E  I +  R+   + IL GS   M + +  
Sbjct: 336 HGGYGYLAEYGIEKIVRDLRVHQILEGSNEIMRVVIAR 373


>gi|127512889|ref|YP_001094086.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638184|gb|ABO23827.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 583

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 100/507 (19%), Positives = 185/507 (36%), Gaps = 57/507 (11%)

Query: 34  MNAYSSD-SLLVALIANFPSVVHK--ELELLGEYVLSCTAQELARMANYNTPQL-HAYGP 89
           MN Y +  + +  L+           EL  L E V   TA  +   A   +  L H    
Sbjct: 1   MNPYQAPLADMKFLLERVFDAPQTWGELAALAETVDMDTATAILDEAEKISRDLIHPINR 60

Query: 90  GGERWD------KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            G+         KV     +  +  +    G      D  F  +   +   +    +   
Sbjct: 61  PGDEQGVSFEDAKVITPDGYREVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYS 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A        S +  +A  +    +  + + + P ++S ++             A  + +T
Sbjct: 121 ACNAFTLYGSLTAGAALCINAHGSDELKEKYLPNLYSGQW-------------AGAMDMT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--RVGCF 256
           E + G+D+  I ++     DG Y +SG K F++    D       ++LA++     +  F
Sbjct: 168 EPQAGSDLRNIRTKAIPQDDGSYLISGSKIFITGGDHDLTENVIHLVLAKLPDSNGISLF 227

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           LVP++  D     G  NG+    +++K+G + +AT  + F +  G+L+G  N     +  
Sbjct: 228 LVPKIKVDDNGELGETNGVTVGSIEHKMGLKGSATCVMNFDDAQGYLIGKANRGLVCMFT 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGG------ILIDQPVMKRAIADI 362
           M     L   I  +   + +   A  YA+ R     +GG       ++    ++R +  I
Sbjct: 288 MMNYERLAIGIQGLGTSQAAYQMASDYAKERLQGQAAGGSDNASDPILVHGDVRRMLMTI 347

Query: 363 ALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                A  ALS       D     E + + + A Y  ++ P+ K +           A +
Sbjct: 348 RCYTEAGRALSVFTGQQLDLAKHAEGEVQEKAARYVGLLTPVAKAFLSDRGLDAAVMAQQ 407

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQD 475
             GG GYI E  I +  R++    I  G+     +D L     G +L    +     +  
Sbjct: 408 VFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAVDFLGRKTTGDDLRTLTEFVGECQSR 467

Query: 476 LGS------SGKKVITILRDSISLCKE 496
           L +      + K +IT   D++    E
Sbjct: 468 LAAMTHVTDAQKALITSRFDALLASGE 494


>gi|94968160|ref|YP_590208.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550210|gb|ABF40134.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 392

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 137/365 (37%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
           H+L+ +    GL        +          I A          AG ++   +    + +
Sbjct: 51  HSLIEQFHQLGLMGIEVPEEYGGGGGTFFEAIIAVEEMSRVDASAGVIVDVQNTLVNNAL 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ +                     L+E   G+D  A+T++ +   
Sbjct: 111 LRWGNADQKKRYLPKMCA--------------EWVGAYALSEAGSGSDAFALTTRAEDKG 156

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++  +  F++LA V+   G   +   L + S  G    + ++K+G R
Sbjct: 157 DHYVINGRKLWITNAKEAGLFVLLATVDPSAGYKGITAFLVEKSFEGFTVGKKEDKLGIR 216

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AI 336
           +++T EL   +         NV     +  KI I  L+   + +    + LA      A 
Sbjct: 217 ASSTCELILEDCKVP---KENVLGEVGKGYKIAIETLNEGRIGIGAQMLGLARGAWEHAA 273

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  L     ++  IA +A +I A   + +  A   D   +  +EAA     
Sbjct: 274 KYATERKQFGQALSSFQGIQFQIAQMATEIEAVRMMVYNAARMKDAGMNFVKEAAM---- 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              TK +  ++A  V + ++E  GG G+ ++    +++R+S    I  G+ N  ++ +  
Sbjct: 330 ---TKLFASQVAERVASLSLEVYGGYGFTKDYPAEKYFRDSKIGKIYEGTSNMQLMTIAK 386

Query: 457 LLEKG 461
           ++  G
Sbjct: 387 MVMGG 391


>gi|301096828|ref|XP_002897510.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
 gi|262106970|gb|EEY65022.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
          Length = 413

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 142/381 (37%), Gaps = 30/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK   +PA    ++     GL     D  +            A           
Sbjct: 54  PIAGELDKEHKYPA--KQVKELGEMGLMGVAIDDKYGGAGLDYLAYSIAMEEISRGCAST 111

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +                   K  S E    +  P          GL+E   G
Sbjct: 112 GVVMSVNNSLYCAP------------LEKFGSVEQKEKHLTPYASGEKLGCFGLSEPGNG 159

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +    G        W  ++  +D  I+ A  +  +    +   L      
Sbjct: 160 SDAGAASTTARSTDKGYVLNGTKAWITNAHDADQAIVFATTDKSLKHKGISAFLVPTDAP 219

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G    + ++K+G R+++T  L F +         N+     +  KI +I LDS  + ++ 
Sbjct: 220 GFSLGKKEDKLGIRASSTGNLIFEDVEVP---KENLLGKEGDGFKIAMITLDSGRIGIAS 276

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     AI YA+ R   G  +   P+++  ++ +A +I AA  L+++ A   D 
Sbjct: 277 QALGIAQASYDCAIAYAQTRKTFGVPIAKNPIIQTKLSTMATEIEAARLLAWKAAVEKDA 336

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++ AA A++ A      C         +A++ +GG GY+ E    RHYR++    I
Sbjct: 337 GRPFTKLAAMAKLKASEAATMCS-------HQAIQVLGGMGYVFEMPAERHYRDARITEI 389

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+   M L +   L K  N
Sbjct: 390 YEGTSEIMHLVIGGALNKEFN 410


>gi|87199662|ref|YP_496919.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135343|gb|ABD26085.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 387

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 146/394 (37%), Gaps = 36/394 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +   R A+     L          D+ +  P    L       GLH    +  F  +   
Sbjct: 20  EAAGRFADEQIAPL------AAEIDRNDRFP--RELWEPMGALGLHGITVEEEFGGLGLG 71

Query: 131 QA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +           + PK+ S E+      
Sbjct: 72  YLDHVIAVEEVSRASGSVGLSYGAHSNLCVNQIRRWGNDEQKAKYLPKLISGEH------ 125

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +   ++ G        W  +   +D  ++ A+ 
Sbjct: 126 -------VGSLAMSEAGAGSDVVSMKLRADAVAGGFRLNGTKFWITNGTYADTLVVYAKT 178

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               G   +   L +    G    +  +K+G R + T EL F + F      +    G V
Sbjct: 179 SPEAGSRGISAFLIEKDMPGFSIGQKIDKMGLRGSPTCELVFDDCFVPEENVMGPLHGGV 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIAL 364
               ++  LD   + ++GM++ + +A       Y R R   G  +    +M+  +AD+ +
Sbjct: 239 --GVLMSGLDYERVVLAGMQIGIMQACLDTVIPYVRERKQFGQPIGTFQLMQAKVADMYV 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I +A A  + +A + D  ++   +AA A ++A        + A  V  EA++ +GG+GY
Sbjct: 297 AIQSARAYVYAVAKACDAGQTTRFDAAGAILLA-------SENAFRVSGEAVQALGGAGY 349

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++  + R+ R++    I  G+     + +   L
Sbjct: 350 TKDWPVERYLRDAKLLDIGAGTNEIRRMLIGREL 383


>gi|86360114|ref|YP_472003.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284216|gb|ABC93276.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 375

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 146/398 (36%), Gaps = 37/398 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +S  A++ AR             PG  R D+    P     L+     GL   +   ++ 
Sbjct: 10  ISDVARDFARD---------RLAPGAARRDREHLFP--RDELKEMGELGLLGMLVPEAYG 58

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +   +  L   T    + + PK+ + E+ 
Sbjct: 59  GSDTGVVAYAAALEEIAAGDGPCSTIMSVHSSVGCVPILKFGTEEQRQRFLPKLATGEW- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AF 243
                         G  LTE + G+D + + ++ ++  D  Y + G K F++S  +    
Sbjct: 118 ------------IGGFALTEPQAGSDASNLKTRARRDGD-YYVIDGAKQFITSGKNGNVI 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R++ K+G  S  T ++ F+         L 
Sbjct: 165 IVFAITDPDAGKKGITAFIVPTDTPGYEVIRVEEKLGLHSTDTCQIAFNAMRIPADLRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  +V   R +   +  YAR R   G  + +   +   +A
Sbjct: 225 AEGEGYRIALANLEGGRIGIAAQAVGMARAAFEASRDYARERTAFGKPIFEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L F  A+  +       EA+ A       K +  +MA  V ++A++  G
Sbjct: 285 DMAVRIEAARQLVFHAASLREAGLPCLSEASMA-------KLFASEMAERVCSDAIQIHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 338 GYGYMADYPVERIYRDVRICQIYEGTSDVQRMVIARNL 375


>gi|257466369|ref|ZP_05630680.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917525|ref|ZP_07913765.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691400|gb|EFS28235.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 378

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 77/404 (19%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L         N    Q   Y   GE          W   +  ++I  G H
Sbjct: 2   AYLISEEAQDLLADVKKFCENEVKEQCKEYDVTGE----------WPKEIYDKAIEQGYH 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S      V +  +    +  A 
Sbjct: 52  ALEVPEEFGGPGLSRVDVAALLEEMAIADAGFATTISASGLGMKPVLISGSQEQKQRVAD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I    +                  LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LILEGGF--------------GAFCLTEPGAGSDASAGKTTAVKDGD-SYILNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +   L +    GL     +NK+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAMTDKTKGVKGISMFLVEAGTPGLSTGNHENKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++    +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARTWMGCIATGIAQRGINEAIAYGKERIQFGKPVIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D     ++E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPFAKESA-------IAKCYAGDIAMEVA 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + + N
Sbjct: 330 SEAIQVFGGYGYSREYPVEKLIRDAKIFQIFEGTNEIQRIVIAN 373


>gi|167907008|ref|ZP_02494213.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           NCTC 13177]
          Length = 393

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 128/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRRYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +             W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVGMKLRAEPRGARYVLNGTKMWITNGPDCDTLVVYAKTEPEGGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAGG 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S        R        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 317 SAHPRQ--VRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|327282658|ref|XP_003226059.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 410

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    PA    +++    GL       ++            A           
Sbjct: 53  PIAAQLDREHRFPA--EQVKKMGSLGLLAMDVPETYGGAGLDYLAYSIAVEEISRGCAST 110

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + T      L   +      W               P           L+E   
Sbjct: 111 GVIMSVNNTLYLGPVLKYGSEEQKHKWI-------------TPFTNGDKIGCFALSEPGN 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  + + D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 158 GSDAGAASTVARLVGDEWVLNGTKAWITNAWDAAATVVFATTDKGLKHKGISAFLVPMPT 217

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL   + ++K+G R+++T  L F +        L     G    M+ L    +  A  +
Sbjct: 218 PGLSLGKKEDKMGIRASSTANLIFEDCRIPKDNLLGEEGMGFKIAMQTLDSGRIGIASQA 277

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  A+ YA +R   G  +     ++  +AD+AL + +A  L++R A   D  K
Sbjct: 278 LGIAQAALDCAVDYAEKRMAFGAPITKFQAIQFKLADMALALESARLLTWRAAMLKDNGK 337

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAA A++ A        + A ++  +A++ +GG GY+ E    RHYR++    I  
Sbjct: 338 PYTKEAAMAKLSA-------SEAATSISHQAIQILGGMGYVTEMPAERHYRDARITEIYE 390

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+     L +   L K 
Sbjct: 391 GTSEIQRLVIAGQLLKA 407


>gi|148547014|ref|YP_001267116.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511072|gb|ABQ77932.1| isovaleryl-CoA dehydrogenase [Pseudomonas putida F1]
 gi|313498060|gb|ADR59426.1| Ivd [Pseudomonas putida BIRD-1]
          Length = 387

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F          L    G V  +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|307728456|ref|YP_003905680.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307582991|gb|ADN56389.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 595

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/438 (21%), Positives = 164/438 (37%), Gaps = 57/438 (13%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D  F       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYQQYVEAGWPALGCDPQFGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + + + PK+ S  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            + ++ +  SDG Y +SG K F+SS   D       ++LA++         +  F+VP+ 
Sbjct: 177 ILRTKAEPNSDGSYSISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+++G+ N     +  M    
Sbjct: 237 IPNDAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    V+   ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEVAYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEGARAFSYWSALHIDKELSHADEAVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-----TNLFEQLFSTLE 473
            GG G+I E  + ++ R++  N I  G+     LD+L     G        F +L +   
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVTEFV 476

Query: 474 QDLG--SSGKKVITILRD 489
           +  G     ++ +  L D
Sbjct: 477 EAEGIKPEMQEFVNPLAD 494


>gi|167577576|ref|ZP_02370450.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 393

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 132/374 (35%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEVDRTDQFPV--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRKYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +            W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADRRGSRFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D A 
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDSA- 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S    +AR        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 316 -GSAHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|311271975|ref|XP_001926332.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Sus scrofa]
          Length = 431

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 60/370 (16%), Positives = 132/370 (35%), Gaps = 31/370 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      +++      GL     +  +          +               +     T
Sbjct: 84  ENSKMEKSVIEGLFQQGLMGIETEPKYGGTGASFFSSVLVIEELAKVDASVALVCDLQNT 143

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      +  K+               T       L+E   G+D  ++ +
Sbjct: 144 VINDLIGRFGTEAQKATYLTKL--------------ATEQLGSFCLSEPSAGSDSFSLKT 189

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 190 RADKDGDYYVINGSKMWITSAEDAGLFLVMANVDPALGYKGITCFLVDRDTEGLRVGKPE 249

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  +   N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 250 NKLGIRASSTCPVTLENAKVP---EANIVGQIGHGYKYAIQSLNKGRIGIAAQMLGLAQG 306

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  + D   ++  +A  A  + AA  L++  A   +  +   +EA
Sbjct: 307 CFDLTIPYLKERVQFGKRIFDFQGLQHQVAHTATQLEAARLLTYNAARLLEAGRPFIKEA 366

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A     + +E +G  GY ++  + +++R++   +I  G+ N  
Sbjct: 367 SMA-------KYYASEVAIQTTNKCIEWMGAVGYTKDYPMEKYFRDAKIGTIYEGTSNIQ 419

Query: 451 VLDVLNLLEK 460
           +  +   + K
Sbjct: 420 LNTIAKNVSK 429


>gi|197122597|ref|YP_002134548.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172446|gb|ACG73419.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 380

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 140/380 (36%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    PA  A +++    GL        +            A           
Sbjct: 26  PHARRWDRDHEFPA--AAVKQLGEMGLMGVAVPAEWGGAGMDNVSYALAMEEISRGCAGT 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS S +      L   T    K++               P  +        LTE   
Sbjct: 84  GVIMSVSNSLYCDPVLKYGTDAQRKEFLE-------------PYARGEKLGCFALTEPMS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +   +  D         +  + P +DA ++ A  +       +   L     
Sbjct: 131 GSDAAEMRTVAVRRGDEYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGISAFLVPTDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    +  +K+G R++ +  L F          L       +  KI +  LD   + ++
Sbjct: 191 RGFSRGKPDDKVGIRASGSCSLFFEGCALPARYRLG---EEGDGFKIAMGTLDGGRIGIA 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +      EA+ YA+ R   G  +     ++  +AD+A +I AA  L  R A++ D
Sbjct: 248 GQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLADMATEIDAARLLVLRAASAKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                S E+A A       K +  +M+  V ++A++  GG GY++E  + RH+R+S    
Sbjct: 308 RGVRHSAESAMA-------KLFASEMSERVTSKAIQIHGGYGYVKEFDVERHWRDSRITE 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   + KG
Sbjct: 361 IYEGTSEIQRLVISASVLKG 380


>gi|126174298|ref|YP_001050447.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125997503|gb|ABN61578.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155]
          Length = 585

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/489 (20%), Positives = 184/489 (37%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKAVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEALKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRNIRTRALPQDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +        NG+    +++K+G + +AT  + F N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLANANGVSVGSIEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVA 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|116193399|ref|XP_001222512.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88182330|gb|EAQ89798.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 446

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 139/370 (37%), Gaps = 25/370 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMS 153
           DK    PA   +  +    G      D     +    QAH +    L   +   A    +
Sbjct: 91  DKNNKFPA--DMWGKLGEAGFLGITADEDVGGLAMGYQAHCVVMEELSRASGSIALSYAA 148

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    + + L  +P   + + P + S E                 L ++E   G+D+ +
Sbjct: 149 HSQLCVNQLQLNGSPEQKQKYLPGLISGE-------------KVGALAMSESGSGSDVVS 195

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++ +++  G        W  + P +D  ++ A+     G   +   + D +  G    
Sbjct: 196 MRTRAKEVDGGYILNGSKMWITNGPDADVVVVYAKTVPDGGSKGITAFIVDTASPGFTCL 255

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R  +K+G R + T EL F N F     +LG +N     + +   L  L  +   +  M+ 
Sbjct: 256 RKLDKMGMRGSNTGELVFENLFVPAENVLGAVNGGVRVLMEGLDLERLVLSAGPLGLMQA 315

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ YA  R   G  +    +++  +AD+   + A+ A ++  A + D      E+ 
Sbjct: 316 ALDVALPYAHTRKQFGTPVAQFQLVQGKLADMYTKLQASRAYTYATARAVD------EQG 369

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                       +  + A     +A++ +GG GY+EE   +R  R++    I  G+    
Sbjct: 370 LIRTQDCAGAILYAAERATECALDAIQVLGGMGYVEEMPASRIMRDAKLYEIGAGTSEVR 429

Query: 451 VLDVLNLLEK 460
            + +     K
Sbjct: 430 RMVIGRAFNK 439


>gi|296330517|ref|ZP_06872995.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305674566|ref|YP_003866238.1| short-chain specific acyl-CoA dehydrogenase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296152199|gb|EFG93070.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305412810|gb|ADM37929.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 380

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 143/380 (37%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+    P      ++    GL    +   +                Y +A  E 
Sbjct: 26  PHAEHVDQTGEFPI--QTFKKMGELGLMGIPFPEEYGGSGGDTIS-------YALAVEEI 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    S  ++ A+ V+L  +P           + E    +  P+         GLTE   
Sbjct: 77  GKACGSTGLSYAAAVSLGASP------LYYFGTEEQKRAHLTPLASGKALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 TPGLTITSPYDKMGVRGSNTAEILLEDVRVPAC---NLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAAYA       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DHNRPFTKEAAYA-------KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 361 EIGEGTSEIQRIVIARQLLK 380


>gi|330874806|gb|EGH08955.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 592

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 93/493 (18%), Positives = 176/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGDPVFGGMGMPKIVSAQVEEMINSASLAFGLYAMLTSGACVSINTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGIW-------------AGSMCLTEAHAGTDLGMIRTKAEPQTDGAYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G+ N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSLGARNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAIGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAVDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R      A ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLAALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q +G+S   +    R   +  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFIGASDSSLGEFTRPLTTAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 DMLDELTGWVLDR 507


>gi|329893922|ref|ZP_08269957.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328923377|gb|EGG30694.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 388

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 158/424 (37%), Gaps = 43/424 (10%)

Query: 47  IANFPS---VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
           ++++P+    + +EL  L + V    A E+A              P     D     P  
Sbjct: 1   MSHYPTLNFGLSEELNALRDMVAQFAANEIA--------------PRAAEIDSTNQFPM- 45

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L R+    GL     +  +        AH I    +   +        + S    + +
Sbjct: 46  -DLWRKFGDLGLLGITVEEQYGGSGMGYLAHCIAMEEISRASASVGLSYGAHSNLCVNQI 104

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ S E+                L ++E   G+D+ ++T +     
Sbjct: 105 RKNGTEEQKQTYLPKLCSGEH-------------IGALAMSEPGAGSDVVSMTLRADDAG 151

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  + P ++ +++ A+ +   G   +   + +    G    +  +K+G R
Sbjct: 152 DHYVLNGNKMWITNGPDANVYVIYAKTDPEAGSRGITAFIVERDSPGFSRAQKLDKLGMR 211

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYA 339
            + T EL F +        L      V+ +   +  + A++S   V  M+  L   + Y 
Sbjct: 212 GSNTCELVFEDCKVPKSHVLGQVGRGVQVLMSGLDYERAVLSGGPVGIMQACLDVVVPYI 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD+ + ++ + A  + +ANS D  +   ++AA        
Sbjct: 272 HERKQFGQAIGEFQLIQGKIADMYVALSTSRAYLYTVANSLDRGEESRKDAAG------- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  + A  +  +A++ +GG+GYI + +  R  R++    I  G+     + +   L 
Sbjct: 325 VILYTAEKATQMALDAIQLLGGNGYINDYATGRLLRDAKLYEIGAGTSEIRRMLIGRELF 384

Query: 460 KGTN 463
           K + 
Sbjct: 385 KESA 388


>gi|317122092|ref|YP_004102095.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
 gi|315592072|gb|ADU51368.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
          Length = 396

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 144/378 (38%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    +D+    P     +R+    G    +   ++        AH I    +       
Sbjct: 29  PRAAAYDESGEFP--WENVRKLAEHGYLGMMIPEAYGGGGMDTLAHAICLEEVARACAAT 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +   +     ++    +  +   W P +              +        LTE   
Sbjct: 87  AVVMDVHNSLVGELINRWASEDMKARWLPVL-------------ARGDRLGAFCLTEPDA 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D AA+ +   +  D  Y L+G K F+S+  +++ +++ A  +   G   +   L +  
Sbjct: 134 GSDAAALKTTAVRDGDH-YVLNGRKTFISNGGVAEIYVVFAVTDPAAGSRGISAFLVEKG 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             GL + +   K+G R+++T ++            +       +  KI L  LD+  + +
Sbjct: 193 TPGLSFGKPFKKMGIRASSTTDVILEQVRVPASHLIGREG---QGYKIALATLDNGRVGI 249

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+     A+ YA +R   G  +     ++  +AD+A  I AA  L +R A  +
Sbjct: 250 GAQAVGIAQAALDRAVAYASQRRQFGRPIGSFQGIQFKLADMATQIEAARLLVYRAAVLY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE+         A     + K +  ++A  V  EA++  GG GY+++  + R  R++   
Sbjct: 310 DESVRTGR---RASKEIAMAKLFASEVAMQVTTEAVQIHGGYGYLQDFEVERLMRDAKIT 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 QIYEGTSEVQRMVIARAL 384


>gi|104782429|ref|YP_608927.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95111416|emb|CAK16136.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 387

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 140/381 (36%), Gaps = 30/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G       +K+G R + T EL F +        L    G V  +  +  LD   + ++G
Sbjct: 196 KGFTRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRVL--MSGLDYERVVLAG 253

Query: 328 -----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D 
Sbjct: 254 GPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDR 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A++  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I
Sbjct: 314 AETTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEI 366

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+     + +   L   T 
Sbjct: 367 GAGTSEIRRMLIGRELFNETR 387


>gi|325274718|ref|ZP_08140761.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324100147|gb|EGB97950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 375

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+WDK    P     +      GL   +   ++            A           
Sbjct: 24  PFAEQWDKAHRFP--REAIDEMAELGLFGMLVPEAWGGSDTGYVAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L   + +    +              AP+   ++  G  LTE + 
Sbjct: 82  STIMSVHNSVGCVPILHFGSEQQKAQFL-------------APLASGAMLGGFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLKTRARLDGDHYVLNGSKQFITSGQNAGVVIVFAVTDPDAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F N    +   L     G    +  L    +  A  +
Sbjct: 189 PGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLGAEGEGYKIALANLEGGRIGIASQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  L++   +   +AD+A  IA A  +    A   D  +
Sbjct: 249 VGMARAAFEVAREYANERQSFGKALVEHQAVAFRLADMATQIAVARQMVLHAAALRDAGR 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAEKVCSHALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDIQRMVIARNL 375


>gi|73540152|ref|YP_294672.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72117565|gb|AAZ59828.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 595

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 165/447 (36%), Gaps = 65/447 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D +F          I      ++        M 
Sbjct: 71  DGVVKAPTGFKEAYQQYVEAGWPALACDPAFGGQGLPI--VINNVVYEMLNSASQAWTMY 128

Query: 154 PSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P ++  +  AL    TP + + + PK+ + E+  T             + LTE   GTD+
Sbjct: 129 PGLSHGAYEALHAHGTPELQQAYLPKLVTGEWTGT-------------MCLTEPHCGTDL 175

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPR 260
             + ++ +   DG Y L+G K F+S+   D       ++LA++         +  F+VP+
Sbjct: 176 GILRTKAEPQPDGSYLLTGTKIFISAGEHDMAENIIHLVLARLPDAPQGTKGISLFVVPK 235

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            + D     G  NG+    +++K+G   NAT  +      G+L+G+ N     +  M   
Sbjct: 236 FIPDASGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWLVGEANKGLNAMFVMMNA 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIA 363
             L      +    V+   ++ YA+ R                  +I  P ++R +    
Sbjct: 296 ARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQK 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAME 417
                  A S+  A   D   S  +EA          ++ P+ K +    A     E M+
Sbjct: 356 AYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFTSTNEGMQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GYI E  + ++ R++  N I  G+     LD+L     G             D+G
Sbjct: 416 VFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLGRKILG-------------DMG 462

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           +  K    I++  +     ++ +  F+
Sbjct: 463 AKMKAFGKIVQAFVEEEGTNEAMQEFV 489


>gi|53722471|ref|YP_111456.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76818344|ref|YP_335630.1| isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126443500|ref|YP_001063051.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           668]
 gi|134282640|ref|ZP_01769344.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           305]
 gi|167724078|ref|ZP_02407314.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           DM98]
 gi|167743056|ref|ZP_02415830.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           14]
 gi|167820227|ref|ZP_02451907.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           91]
 gi|167898666|ref|ZP_02486067.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           7894]
 gi|167916818|ref|ZP_02503909.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           112]
 gi|167923196|ref|ZP_02510287.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           BCC215]
 gi|217425365|ref|ZP_03456859.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|237508291|ref|ZP_04521006.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254185266|ref|ZP_04891855.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|254186766|ref|ZP_04893282.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254263446|ref|ZP_04954311.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
 gi|52212885|emb|CAH38919.1| putative acyl-coA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76582817|gb|ABA52291.1| isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126222991|gb|ABN86496.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           668]
 gi|134246197|gb|EBA46287.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           305]
 gi|157934450|gb|EDO90120.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184215858|gb|EDU12839.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|217391616|gb|EEC31644.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|235000496|gb|EEP49920.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254214448|gb|EET03833.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
          Length = 393

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 128/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRRYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +             W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVGMKLRAEPRGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAGG 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S        R        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 317 SAHPRQ--VRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|149927974|ref|ZP_01916223.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149823270|gb|EDM82504.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 380

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 78/388 (20%), Positives = 147/388 (37%), Gaps = 34/388 (8%)

Query: 72  ELARMANYNTPQL--HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           E    A  N  +       P    W++    P    +   +   G+    +   F     
Sbjct: 8   ETHDEARRNIRRFVERHIQPNINEWEEASTFP--REIFNLAGDAGILGIGYPEEFGGNSE 65

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTN 187
                   A   L+     G   S      ++  +A   +P + +   P           
Sbjct: 66  GDYFMSLVATEELLRAGSGGFFSSLMSHGIALPPIAKWASPEMKERIVP----------- 114

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+ +    I L +TE  GG+D+A + ++     D  Y +SG K +++S +   +  +A
Sbjct: 115 --PVLRGEKIIALAVTEPGGGSDVANLKTRAVDCGDH-YKVSGSKTYITSGIRADYYTVA 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
              G  G   +  LL +    G    +   K+G   + T EL F N        + +  G
Sbjct: 172 VRTGGDGYGGISMLLMEKGMPGFTTGQPLKKMGWWCSDTAELFFDNVVVPKSNLIGIENG 231

Query: 308 PVEDMKILIYLDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
               M I+   ++  + ++        ++  EA++YA+ R   G  L    V++  +AD+
Sbjct: 232 GF--MMIMTNFEAERLGLACYANTLSELAFNEALNYAKNRSTFGKPLSKHQVIRHKLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + A+   ++R+A      K   +E + A+  A  T  +       +  EA++  GG 
Sbjct: 290 ATQLEASREFTYRVAARMQAGKPALKEVSMAKNFATKTSDF-------ITYEAVQIFGGM 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           G++ E  + R YR++   SI  G+   M
Sbjct: 343 GFMRESLVERLYRDNRIASIGGGTYEIM 370


>gi|282600651|ref|ZP_05979320.2| butyryl-CoA dehydrogenase [Subdoligranulum variabile DSM 15176]
 gi|282571700|gb|EFB77235.1| butyryl-CoA dehydrogenase [Subdoligranulum variabile DSM 15176]
          Length = 394

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 132/383 (34%), Gaps = 30/383 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ++ D  E+ P     +++    G+    + +          ++ +    +  +    
Sbjct: 31  PLAKKVDAEEYFPV--ETVQKMAKLGMMGIYFPKEVGGAGGDVLSYVMAVEEMSKVCGTT 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   A+ +    TP     + PK+ S E+                 GLTE   
Sbjct: 89  GVIISAHTSLCAAPIFENGTPEQKAKYLPKLCSGEW-------------IGAFGLTEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLL 262
           GTD     +      D         +  ++  ++ FI++A       +       +   +
Sbjct: 136 GTDAQGQQTFAVDEGDHWKLNGSKIFITNAGYANVFIIIAVTGTVLDKRGRKQKEISAFI 195

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            + +  G    + ++K+G R ++T EL   +        L V     +    +  LD   
Sbjct: 196 VERTDPGFKVGKPEDKMGIRGSSTCELIMEDCIIPKDRLLGVKGKGFQ--LAMATLDGGR 253

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + +AE      + Y + R   G  +      +  +A++   + AA  L ++ A
Sbjct: 254 IGIAAQALGIAEGALDETVAYVKERKQFGRSISAFQNTQFELAEMKARVDAAKFLVYQAA 313

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                    ++  A   + A   K    + A  V    ++  GG GY  +  I R  R++
Sbjct: 314 LKKQSVMDGAK--ARYSVEAAEAKLIAARTASDVTRRCLQLFGGYGYTRDYPIERMMRDA 371

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+    ++ +   + K
Sbjct: 372 KITEIYEGTSEVQMMVISGAMLK 394


>gi|195353562|ref|XP_002043273.1| GM26869 [Drosophila sechellia]
 gi|194127387|gb|EDW49430.1| GM26869 [Drosophila sechellia]
          Length = 405

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 144/378 (38%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NAAKFDREHLYPE--KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W  ++  ++A I+ A    ++    +   +   +  
Sbjct: 154 SDAGAASTIATDKGDHFVVNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATK 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G R ++T +L F +    ++   N+   P    KI +  LD+  + ++ 
Sbjct: 214 GFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAS 270

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 331 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 383

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 384 YEGTSEIQRLVIAGSILK 401


>gi|58584002|ref|YP_203018.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625780|ref|YP_453152.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188574667|ref|YP_001911596.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428596|gb|AAW77633.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369720|dbj|BAE70878.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519119|gb|ACD57064.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 387

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 149/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  AN++   L          D V   P    L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFANHHIAPL----AAAADHDNV--FPT--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    +P   + + PK+
Sbjct: 60  VEEAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASPEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRYVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL FS+     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKLDKLGMRGSNTCELVFSDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++  A+ Y   R   G  + +  +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALPYVHERKQFGEPIGNFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D   +  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGCTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|52080477|ref|YP_079268.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52785859|ref|YP_091688.1| hypothetical protein BLi02106 [Bacillus licheniformis ATCC 14580]
 gi|52003688|gb|AAU23630.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52348361|gb|AAU40995.1| putative protein [Bacillus licheniformis ATCC 14580]
          Length = 571

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 79/440 (17%), Positives = 163/440 (37%), Gaps = 49/440 (11%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLM 152
            D+ + H +   L +++   GL           +   K+   + A ++           +
Sbjct: 54  IDQQD-HESVKKLFQKAGELGLLSIEVPEDCGGLSLSKKLSGLVAEKMGAGGSFSVSFNI 112

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              V +   +    T    + + PK+ S E+                  LTE   G+D  
Sbjct: 113 HAGVGTLPYI-YYGTEEQKQKYLPKLASGEW-------------IGAYALTEPGAGSDAL 158

Query: 213 AITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +     +           +W  ++ ++D +++ A+         +   + + S  G+
Sbjct: 159 NAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKT-----AEGMTAFIVERSFKGV 213

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                + K+G + ++T  L           +LG +        ++  +  L  A  ++  
Sbjct: 214 SIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILNMARLKLAFSNIGT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---- 383
            + +L  A+ YA++R      +I   +++  IAD+A+ I  A + ++R A+  D      
Sbjct: 274 AKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESAAYRTADCLDNVLDSA 333

Query: 384 ---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                R  +         I K +C ++   +  EA++  GG GY++E  + R YR++  +
Sbjct: 334 LPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYMQEYEVERLYRDARIS 393

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL------- 493
            I  G+     L +  LL K   + +   S  E  LGS G +    ++ S  L       
Sbjct: 394 RIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNRNRRFIQLSNRLFGKTLKA 451

Query: 494 -------CKEDKGLARFLTE 506
                   +ED+  AR L +
Sbjct: 452 LIRSRVNTQEDQEYARLLAD 471


>gi|290992490|ref|XP_002678867.1| predicted protein [Naegleria gruberi]
 gi|284092481|gb|EFC46123.1| predicted protein [Naegleria gruberi]
          Length = 594

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 122/530 (23%), Positives = 216/530 (40%), Gaps = 55/530 (10%)

Query: 35  NAYSSDSLLVALIANF-----------PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           N +  D  L+ ++  +              + K+L   G+ V S T  + + +A  N P+
Sbjct: 19  NTFLEDQALLEILDRYIFSLDKKNNTIRDDIMKDLTAFGDKVSS-TIWKWSDLAERNEPK 77

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  Y     R D++E H +W  L   S  +GL    ++R      R+ A   + A+LYL 
Sbjct: 78  LIHYDAWHNRVDRIEMHSSWKELYDTSAREGLIALGYERDRF---RQFARVYQFAKLYLY 134

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A      S+   +   L T           +       T++ P Q         +T
Sbjct: 135 DPSCAVQTCPLSMGDGASKLLETKREQL------MIECRQHLTSRDPEQ--FWTSNQWMT 186

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL---VPR 260
           EK GG+D++   +   ++ D  Y L+G KWF SS  S   ++LA+++      +   V  
Sbjct: 187 EKSGGSDVSGCETIATQVKDFDYLLNGFKWFGSS-DSAMALLLAKIKDEKTGKVDDKVSL 245

Query: 261 LL-----EDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            L     E G + NGL + + KNK+G ++  T E+E  N    L+         +  M  
Sbjct: 246 FLLKTKDETGQNWNGLLFHKFKNKLGTKAMPTSEIELKNAKATLISPRGQGVKFIATMIN 305

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALS 373
           +  + ++I +V+ MR ++  A  +A +R V+ G IL    +  R ++ +  +   +    
Sbjct: 306 VTRIYNSICAVAKMRRAVNIAQDFASKRIVNKGQILAHNTLHLRWLSKMVAETTGSLHFV 365

Query: 374 FRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                     +   +   E    R+  PI K +  K +  V++E +E +GG GY E+  +
Sbjct: 366 MDCVRILGKEECGIANQNERQILRLCIPIIKLYTGKKSLQVVSEGLEMLGGVGYTEDSGM 425

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS----------- 479
            R  R++   SI  G+ N + LDVL +L    +  + L S +++ +  +           
Sbjct: 426 PRLLRDAQVLSIWEGTTNILSLDVLRVLLHPESGQDTLKSWVDRAVSVANSPSSSNVSHI 485

Query: 480 GKKVITILRDSISLCKEDK-------GLARFLTEKIALASSAAALYRAGM 522
            K +   + D +   K ++         AR L   IA    A  L    M
Sbjct: 486 SKGITKAVHDVVDYLKTNQKNQAVLTTFARDLAFTIAHIQVAVLLLEHCM 535


>gi|169342202|ref|ZP_02863287.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
 gi|169299686|gb|EDS81743.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495]
          Length = 378

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 137/378 (36%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P      ++    G+    +   +          + A           
Sbjct: 26  PFAIENDENSTFPI--EAYKKLGELGVIGLPYSTEYGGTGGDYLSYVLAIEEISKVDASM 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S + +  +      +  + K + P I S                    GLTE   G
Sbjct: 84  GIAVSVTTSLCAGGISNASEELKKKYLPDILSG-------------KKLGSFGLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + +  +K  D         +  ++P+S  FI+ A  +   G   +   + +    
Sbjct: 131 SDAGGVITVAEKKGDNYILNGAKCFITNAPLSGTFIVFALTDRTKGSKGLSAFIVEKDFP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G+   ++++K G +S    E+ F++         N+     +  KI +  LD   + V+ 
Sbjct: 191 GISIGKIEDKCGIKSAQVSEVLFNDCVVPAS---NLVGKEGDGFKIAMKTLDGGRIGVAA 247

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  + ++ A    E
Sbjct: 248 QGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYMLYKAAMDKQE 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  S  AA A       K  C   A  V  EA++ +GG+GY+ E  + R  R++    I
Sbjct: 308 GKPYSVSAAKA-------KLVCTDAAMHVTTEAIQMLGGNGYMREYQLERMMRDAKITQI 360

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 361 YEGTNEIQKLIISGSLFR 378


>gi|167573231|ref|ZP_02366105.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 398

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 132/377 (35%), Gaps = 22/377 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGAGLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKRKYLPKLISGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  +         W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADKRGERYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   I Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAGG 316

Query: 385 SRSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + S   A+ R           +  + A  +  EA++ +GG+GYI E  + R +R++    
Sbjct: 317 TASAGGAHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYE 376

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 377 IGAGTSEIRRMLIGREL 393


>gi|332083186|gb|EGI88417.1| protein aidB domain protein [Shigella boydii 5216-82]
          Length = 300

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/300 (37%), Positives = 160/300 (53%), Gaps = 8/300 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKM 294


>gi|126740734|ref|ZP_01756420.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
 gi|126718249|gb|EBA14965.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
          Length = 593

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 99/546 (18%), Positives = 185/546 (33%), Gaps = 77/546 (14%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLR 108
                    L         +E  ++A      L+      G R +  V + P  +     
Sbjct: 23  EAATPGYSELDREFTGAILEEAGKIAGEVLHPLNVVGDQEGCRLENGVVYTPTGFKEAFD 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +    G         +                +  A          +  +A+ +    T 
Sbjct: 83  QVKEGGWTGLDMPEQYGGQNMPYVMGTAVGEYFSAANQAFVMYQGLTHGAAAAILAHGTD 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                + PK+ S E+  T             + LTE   GTD+  + ++ +   DG + +
Sbjct: 143 EQKDSYLPKMISCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSFKI 189

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEGRV-GCFLVPRLLED----------GSPNGLCY 272
           SG K F+S+   D       ++LA++ G   G   V   +            G  NG+  
Sbjct: 190 SGQKIFISAGDHDMSDNVIHLVLAKIPGGPEGIKGVSLFIVPKFKLKADGTPGERNGVAV 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             ++ K+G   N+T  + +    G+LLG  +     +  M     L   +  VS    + 
Sbjct: 250 GNIEKKMGIHGNSTCVMNYDEATGYLLGSEHKGMRAMFTMMNEARLGVGMQGVSQAEAAY 309

Query: 333 AEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             A+ YA+ R   G               LI  P ++R++ D         A     +  
Sbjct: 310 QNAVEYAKDRLQ-GRDVTGAKNPEGPADPLIVHPDIRRSLMDQKSFAEGGRAFLLWGSTM 368

Query: 380 FDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D+A      +      ++ P+ K +       +  +A +  GG GYIEE  ++++ R++
Sbjct: 369 IDQAHRDESKDADGLISLLTPVIKGFLSDEGYDMTVKAQQVFGGHGYIEEHGMSQYTRDA 428

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LCKE 496
               I  G+     LD++                  + LG+ G K +    D I   CK+
Sbjct: 429 RIAQIYEGANGVQALDLVG-----------------RKLGADGGKHVMAFFDLIKNFCKD 471

Query: 497 DKGLARFLTEK--IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           +  L+          L +++  L  AGM      F++N       + +  L G ++  H+
Sbjct: 472 NAELSEDYARDFIAPLKAASKDLQAAGM-----YFMQN----GMKNPNNALSGSYDFMHL 522

Query: 555 IDSLYL 560
              + L
Sbjct: 523 FGHVCL 528


>gi|87118372|ref|ZP_01074271.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121]
 gi|86166006|gb|EAQ67272.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121]
          Length = 599

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 91/479 (18%), Positives = 169/479 (35%), Gaps = 71/479 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERW-----DKVEFHP-AWHALLRRSIHDGLHC 117
            +++   +E A+ A      L      G++      D V   P  +    ++ +  G   
Sbjct: 37  DMIAAILEEGAKFAER---VLSPLNRVGDQQGCTFKDGVVTTPEGFKEAYQQYVEGGWAS 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                        ++  +    +   A    G     S  + + +    T    + +  K
Sbjct: 94  LPHAEEVGGQGLPESLGLMVTEMIGTANWSWGMYPGLSHGAMNTLESHGTEEQKQTYLTK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+
Sbjct: 154 LVSGEWTGT-------------MCLTEPHCGTDLGLLKTKAEPQADGSYAISGTKIFISA 200

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       I+LA++         +  F+VP+   D        NG+    +++K+G 
Sbjct: 201 GEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFNVDDQGEAADRNGVACGSIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + F    G+L+G  N     +        L +A+  ++    +L  ++ YAR 
Sbjct: 261 HGNATCVMNFDGAKGYLIGPENKGLNCMFTFMNTARLGTALQGLAHSEWALQNSVSYARD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----- 384
           R                  +I  P ++R +           AL    +   D  K     
Sbjct: 321 RLQMRALSGPKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRALIHYCSMLVDITKKGSPD 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++       ++ PI K +  +         M+  GG G+I E  + ++ R+   + +  
Sbjct: 381 EKAHADELMSLLTPIAKAFLTETGYEAANLGMQVYGGHGFISEWGMEQNVRDCRISMLYE 440

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           G+     LD+L                  + L S GK + T  +     CKE KG  RF
Sbjct: 441 GTTGIQALDLLG----------------RKVLMSQGKTLKTFTKIIHKFCKEHKGDKRF 483


>gi|167615724|ref|ZP_02384359.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
          Length = 393

 Score =  280 bits (716), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 132/374 (35%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEVDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRKYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +            W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADRRGSRFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D A 
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDSA- 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S    +AR        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 316 -GSAHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|237653153|ref|YP_002889467.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|237624400|gb|ACR01090.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 595

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/545 (18%), Positives = 190/545 (34%), Gaps = 62/545 (11%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P    M       +L  L            E     V+    +E  R A      L+   
Sbjct: 6   PPLRDMQF-----ILAELAGLDDIARLPGCEEASADVIGAVLEEAGRFAAGVLAPLNRAG 60

Query: 88  GPGGERW---DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G R     +V     W     +    G         F      +        ++  A
Sbjct: 61  DEQGCRLLEGGRVATPEGWQPAYAQFCAAGWLGLSLPVEFGGQGLPKLVSTPVMEMWNAA 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +    L   +   A  + +  +    + W PK+ S E+  T             + LTE
Sbjct: 121 NMAFTMLPILNQGQAEALRIAASAEQKRTWLPKVVSGEWGST-------------MNLTE 167

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
            + G+D+AA  ++ +  +DG Y L G K F+S    +       ++LA++         +
Sbjct: 168 PQAGSDLAATRTRAEPQADGSYKLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGL 227

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVS 305
             F+VP+ L +     G+ N +    +++K+G   + T  L F       G+L+G+ N  
Sbjct: 228 SLFIVPKFLVEPDGSLGARNDVRCISIEHKMGIHGSPTCTLSFGEGGGAIGWLVGEPNRG 287

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKR 357
              +  M         +   +    +   A+ YAR R           G  ++  P +KR
Sbjct: 288 LEVMFVMMNEARFGVGVQGAALAERAYQMALGYARERVQGRDAVSGAAGRPILCHPDVKR 347

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAV 411
            +  +   + A   L +  A  FD A    + A       Y  ++ P+ K WC ++   V
Sbjct: 348 MLLSMRARVMAMRTLLYTAAGWFDIAHHHPDAAVADKHRRYVDLLMPVAKGWCTELGNDV 407

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLF 469
             EA++  GG G++EE  +A+H+R++   +I  G+       L    +L +G     +L 
Sbjct: 408 CDEAIQVFGGMGFVEETGVAQHFRDARIITIYEGTTGIQANDLVGRKILREGGATLRELI 467

Query: 470 STLEQDLGSSGKKVITILRDSISLC-KEDKGLARFLT----EKIALASSAAALYRAGMND 524
             L     +     +  L D         +    ++     E++    + A  +   +  
Sbjct: 468 VELRASATALSAAGLAELGDGQGAAIDALESATDWILANGREQLGEVLAGAVPFLHLLGT 527

Query: 525 IADVF 529
           +   +
Sbjct: 528 VCGGW 532


>gi|153953092|ref|YP_001393857.1| acyl-CoA dehydrogenase family protein [Clostridium kluyveri DSM
           555]
 gi|219853743|ref|YP_002470865.1| hypothetical protein CKR_0400 [Clostridium kluyveri NBRC 12016]
 gi|146345973|gb|EDK32509.1| Bcd [Clostridium kluyveri DSM 555]
 gi|219567467|dbj|BAH05451.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 379

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E  P     + +    G+    +   +        ++ I    L       
Sbjct: 26  PIAAEIDETERFPL--ETVEKFAKYGMMGMPFPVEYGGSGTDYLSYIIAVEGLAKSCTSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L + +   A+ +    T    + +               P+ K       GLTE   
Sbjct: 84  STILSAHTSLCAAPIYDWGTEEQKQKYL-------------VPLAKGEKLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GTD A   +      D  Y L+G K F+++   +D F++ A  +   G   +   + +  
Sbjct: 131 GTDAAGQQTTAVLEGDH-YVLNGQKIFITNGAYADTFVIFAMTDRSKGTRGITAFIVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    + ++K+G R+++T EL F N        L     G    M  L    +  A  
Sbjct: 190 FPGFSIGKSEDKLGIRASSTTELIFENCIVPKENMLGKEGKGFTVAMHTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +LAEA++Y + R   G  L     +   +A++   I A   L ++ A +    
Sbjct: 250 ALGLAEGALAEALNYMKERKQFGKALYKFQGLAWMVAELDTKIEAVKQLVYKAAVNKQMG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S EAA A++ A          A     + ++  GG G+ ++  + R  R++    I 
Sbjct: 310 LPYSVEAARAKLAAATV-------AMETTTKVVQIFGGYGFTKDYPVERMMRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 363 EGTSQVQKMVISANLFK 379


>gi|319645561|ref|ZP_07999793.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2]
 gi|317392447|gb|EFV73242.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2]
          Length = 571

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 79/440 (17%), Positives = 163/440 (37%), Gaps = 49/440 (11%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLM 152
            D+ + H +   L +++   GL           +   K+   + A ++           +
Sbjct: 54  IDQQD-HESVKKLFQKAGELGLLSIEVPEDCGGLSLSKKLSGLVAEKMGAGGSFSVSFNI 112

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              V +   +    T    + + PK+ S E+                  LTE   G+D  
Sbjct: 113 HAGVGTLPYI-YYGTEEQKQKYLPKLASGEW-------------IGAYALTEPGAGSDAL 158

Query: 213 AITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +     +           +W  ++ ++D +++ A+         +   + + S  G+
Sbjct: 159 NAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKT-----AEGMTAFIVERSFKGV 213

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                + K+G + ++T  L           +LG +        ++  +  L  A  ++  
Sbjct: 214 SIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILNMARLKLAFSNIGT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---- 383
            + +L  A+ YA++R      +I   +++  IAD+A+ I  A + ++R A+  D      
Sbjct: 274 AKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESAAYRTADCLDNVLDSA 333

Query: 384 ---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                R  +         I K +C ++   +  EA++  GG GY++E  + R YR++  +
Sbjct: 334 LPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYMQEYEVERLYRDARIS 393

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL------- 493
            I  G+     L +  LL K   + +   S  E  LGS G +    ++ S  L       
Sbjct: 394 RIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNRNRRFIQLSNRLFGKTLKA 451

Query: 494 -------CKEDKGLARFLTE 506
                   +ED+  AR L +
Sbjct: 452 LIRSRVNTQEDQEYARLLAD 471


>gi|254785957|ref|YP_003073386.1| acyl-CoA dehydrogenase domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686128|gb|ACR13392.1| acyl-CoA dehydrogenase domain protein [Teredinibacter turnerae
           T7901]
          Length = 594

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/512 (17%), Positives = 174/512 (33%), Gaps = 67/512 (13%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
               +     D L      ++ S      E     +++   +E A+        L+A   
Sbjct: 7   PLKDLEFVLYDML--DYEQHYAS--LPGCEEANRELITAIVEEAAKFCENVLAPLNAVGD 62

Query: 89  PGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G  W    V   P +    ++ +  G         +      ++     + +   A  
Sbjct: 63  EHGCDWQDGVVTTPPGFKEAYQQFVEGGWPSINHSVDYGGQGLPESVGTIISEMTGAANW 122

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S  + + +A   T      +  K+    +  T             + LTE  
Sbjct: 123 AWSMYPGLSHGAMNTLAQHGTVEQKSVYLTKLVEGSWTGT-------------MCLTEAH 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGC 255
            GTD+  + ++ +   DG Y + G K F+S+   D       I+LA++         +  
Sbjct: 170 CGTDLGMLKTRAEPQDDGSYRIQGSKIFISAGDHDLAENIVHIVLARLPDAPEGTKGISL 229

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ L       G  N +    +++K+G   NAT  L F +  G+L+G  N     + 
Sbjct: 230 FIVPKYLPAEDGSVGERNAVTCGSIEHKMGIHGNATCVLNFDDATGYLIGPPNRGLHCMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
                  L +A+  ++   V   +++ YA+ R                  +I  P ++R 
Sbjct: 290 TFMNTARLGTALQGLAHAEVGYQKSLSYAKERLQMRALSGPKNPSGPADPIIVHPDVRRM 349

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +            L    +   D      +A  ++E A     + PI K +  +      
Sbjct: 350 LLTQKAFAEGGRMLIHYCSQLVDIEQLSDDAGRKTEAADLLAFLTPIAKAFLTETGFEAA 409

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
             A++C GG GYI E  + ++ R++    +  G+     LD+L                +
Sbjct: 410 NHALQCFGGHGYIREWGVEQNVRDARIAMLYEGTTGIQALDLLG-------------RKV 456

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
               G   K+   ++       ++++ LA F+
Sbjct: 457 LMSQGELLKRFTKVVHKFCKANEDNEQLAEFV 488


>gi|70732969|ref|YP_262742.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347268|gb|AAY94874.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 592

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 89/492 (18%), Positives = 175/492 (35%), Gaps = 58/492 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHD 113
           + +E + E     TA+ +A       P        G  WD   V     +    +     
Sbjct: 38  ETVEAILEEAGKVTARSIA-------PLSRGADEEGCHWDNTVVTTPEGFPQAYQTYAEG 90

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G      D  F  +   +A   +   +   A L  G     +  +   +    +  +   
Sbjct: 91  GWVGVGGDPEFGGMGMPKAVSAQVEEMVNSASLAFGLYPMLTAGACLSINAHASEELKAT 150

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y +SG K 
Sbjct: 151 YLPNMYAGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPRADGSYAISGTKI 197

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA++         +  FLVP+ + +     G  N +    +++
Sbjct: 198 FITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGERNPVTCGSIEH 257

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   AI 
Sbjct: 258 KMGIQASATCVMNFDQAIGYLVGEPNKGLAAMFTMMNYERLGVGIQGLATGERSYQNAIE 317

Query: 338 YARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384
           YAR R  S               +I  P ++R +  +        A S  +A   D AK 
Sbjct: 318 YARDRLQSRSPTGPQAKDKVADPIIVHPDVRRMLLTMKAANEGGRAFSTYVAMQLDTAKF 377

Query: 385 -----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                +R    +   ++ P+ K +   +         +  GG GYI E    +  R+   
Sbjct: 378 SEDPDTRKRAESLVALLTPVAKAFLTDLGLETTVHGQQIFGGHGYIREWGQEQLVRDVRI 437

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
             I  G+     LD++   ++  G   ++     +     ++ ++     R   +     
Sbjct: 438 TQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATADEQWGEFTRPLNAALDNL 497

Query: 498 KGLARFLTEKIA 509
             L  ++ ++ A
Sbjct: 498 DELTAWVLDRSA 509


>gi|39934684|ref|NP_946960.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39648534|emb|CAE27055.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 390

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 143/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  E  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRETVRDFAANEIAPRAEAIDKTNTFP--RDLWPKLGALGLHGITVEEDYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         + + PK+ S E+  
Sbjct: 70  AGLGYLEHCIAMEEISRASASVGLSYGAHSNLCINQIRRNGNEAQKQKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++  K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRADKKGDRFVLNGNKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPNAGPRGITAFLIEKGFKGFSTAQKLDKLGMRGSDTGELLFEDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   V  M+  +   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGETTREDAAGA-------ILYAAERATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|313901750|ref|ZP_07835177.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467986|gb|EFR63473.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 379

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 131/379 (34%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               PG    D+    PA     R     G+    +                A      A
Sbjct: 22  RRIAPGAAERDRTGTFPA--EQFRELGELGILGLPFPEEVGGSGGDTLSFAIAVEEIARA 79

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  ++  V+       L  +  +   W              AP  +       GLT
Sbjct: 80  CASTALTVAAHVSLGCTPLYLFGSEELKARWL-------------APALRGEKIAAFGLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLL 262
           E   G++ AAI ++ ++  D  + + G K F+++     F+++A   +   G   +  +L
Sbjct: 127 EPEAGSNTAAIRTRARQEGD-RWVIEGTKIFITNGSHADFVVVAAVTDPEAGRDGISNIL 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLD 319
                 G    R   K+G  ++ T EL F      L   +       +          + 
Sbjct: 186 VPREAPGWRAVRRYEKLGLHASDTAELVFDGCRVPLDHLVGERGKGHQQFLQTLDGGRIG 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +SV   +  L  A+ YAR R   G  +     ++  +AD+A  + AA  L +R A  
Sbjct: 246 IGALSVGIAQACLDAALEYARHRRQFGRPISKFQAIQFKLADMATQLEAARWLVYRAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EAA A       K +  ++A     EA++  GG+GY  +  + R+ R++  
Sbjct: 306 RDRGRPYRREAAMA-------KLFASELAVRAALEAIQIHGGAGYTRDFPVERYLRDAKL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     L +   L
Sbjct: 359 MEIGEGTSEIQRLVIAREL 377


>gi|330823859|ref|YP_004387162.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309231|gb|AEB83646.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 612

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 126/495 (25%), Positives = 207/495 (41%), Gaps = 26/495 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTP 82
                G++ +  D  L  L+  +            L+ LG+        ELA +A+ + P
Sbjct: 26  ASDCAGLDFFEIDPGLQQLLPLYVPQAELQYFLPHLKRLGQLAGGR-LNELATVADKHGP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LHA    GE  D VE+HPA+  +   +      H               +   + A  Y
Sbjct: 85  VLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGTLSPVTKYAFQY 144

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G +   SVT  S  ++    +  +     P++          A   +      
Sbjct: 145 LFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLPRML---------AEKLEDLWKGT 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  + +   ++ DG + L G KWF S   +D  ++LA+ E        +
Sbjct: 196 QFMTEKAGGSDVGQVETTA-RLIDGQWHLFGEKWFSSHVDADVALILARPENAPAGTRGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR  EDGS N     RLK+K+G RS A+ EL     F +L+GD       + +  
Sbjct: 255 ALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAFAYLVGDPTRGLKQMMEQV 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  A+ + + MR  L EA+  A  RH  G  ++D P+M+R +  I +   AA +++
Sbjct: 315 NLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLMQRQLLKIMVPTEAALSVT 374

Query: 374 FRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A+   +  +  ++AA A R++ P+ K   C+    V   AME  GG+GYIE+   AR
Sbjct: 375 LATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATGAMEVRGGNGYIEDFVNAR 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++    +  G+ N   LD +    +       L + L + L         + R    
Sbjct: 435 LVRDAHIGVLWEGTSNINALDAIGRAVRKDRAHLALQAVLREKLHGVQHSAPDMARQLGH 494

Query: 493 LCKEDKGLARFLTEK 507
              +   LA  +  +
Sbjct: 495 ALDQAIALAETVATR 509


>gi|254516151|ref|ZP_05128211.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR5-3]
 gi|219675873|gb|EED32239.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR5-3]
          Length = 669

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 82/475 (17%), Positives = 178/475 (37%), Gaps = 55/475 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+ A      L+      G  W +  V+    +    ++ + +G      
Sbjct: 109 DLMNAIIEEGAKFAENVLSPLNQSGDEEGCTWSEEGVKTPAGFADAYKQYVDNGWPSLSA 168

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
           +  F          I      L        LM P ++   +  L    +P   + + PK+
Sbjct: 169 EPEFGGQDMPSMLGIVI--NELAGTANWSWLMYPGLSHGCIKTLEAHGSPEQKQQYLPKL 226

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S  +  T             + LTE   G+D+  + ++ +  +DG Y ++G K F+S+ 
Sbjct: 227 VSGNWTGT-------------MCLTESHCGSDLGLLRTKAEPQADGSYAITGTKIFISAG 273

Query: 239 MSD-----AFIMLAQ------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I++A+          +  F+VP+   +     G  NG+    ++ K+G +
Sbjct: 274 EHDMSDNIVHIVIARMPDAPEGTKGISLFVVPKFNVNEDGSIGERNGVHCASIEKKMGIK 333

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    G+L+G+ N     +        + +AI  ++   ++   ++ YAR R
Sbjct: 334 ASATCVMNFDGAKGYLIGEPNRGLNMMFTFMNTARIGTAIQGLAHAELAYQGSLEYARER 393

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                             +I  P ++R +         + A+ + LA   D  +   EE+
Sbjct: 394 LAMRSLTGPKNPDGPADPIIVHPDVRRMLLTQKSIAEGSRAMLYYLAQLGDIVERGDEES 453

Query: 391 A-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           A        ++ PI K +  +         ++  GG G+I E  + +  R++   ++  G
Sbjct: 454 AKKADDLMALLTPIAKAFVTEAGLEAANHGIQIYGGHGFIREWGMEQIARDARIATLYEG 513

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +     LD++   +L  G  L       + + +  +  +        ++  K++ 
Sbjct: 514 TTGIQALDLIGRKVLGSGGKLLMGFTEMMGEFVAENSDEAYAEFTTPLAKYKDEW 568


>gi|170691427|ref|ZP_02882592.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143632|gb|EDT11795.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 595

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 95/446 (21%), Positives = 166/446 (37%), Gaps = 63/446 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D  +       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYQQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + K + PK+ S  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQKVYLPKLVSGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            + ++ +  SDG Y +SG K F+SS   D       ++LA++         +  F+VP+ 
Sbjct: 177 ILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+L+G+ N     +  M    
Sbjct: 237 VPNDAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    V+   ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEVAYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG G+I E  + ++ R++  N I  G+     LD+L     G             D+G+
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILG-------------DMGA 463

Query: 479 SGKKVITILRDSISLCKEDKGLARFL 504
             KK   ++ + +        +  F+
Sbjct: 464 KMKKFGKLVTEFVEAEGIKPEMQEFI 489


>gi|282857316|ref|ZP_06266553.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455]
 gi|282584816|gb|EFB90147.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455]
          Length = 377

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 136/381 (35%), Gaps = 35/381 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+       G            H L ++    GL        +             
Sbjct: 21  NEVAPRDQWMDENGFD----------HDLHKKLTEAGLMAIHMPEEYGGGGGDAITSEIV 70

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                         +     +A M+ L  +    K + P+                    
Sbjct: 71  INEIARGSASVALFLDAHWLAADMILLHGSEAQKKKYVPQCAEG--------------KV 116

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
              GLTE   G+D AAI S  +K  DG Y L+G K W  +S ++D ++++A+ +   G  
Sbjct: 117 FAFGLTESNAGSDAAAIKSVAEKQPDGGYILNGSKAWITNSGVADYYLIMAKTDPAAGNH 176

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL 315
            +   +      GL   + + K+G R  AT EL F N        +     G +  M+ L
Sbjct: 177 GISVFVVPKDAEGLTVGKFEKKMGMRGTATCELSFDNVRLPADSLVGDEGKGFMIAMQAL 236

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +    ++   M+ ++ +A  YAR R   G  +     +    AD+A  I A   + 
Sbjct: 237 DGARISIGAIASGLMQHAMDKAAAYARERTTFGKPIARHQAVGFKFADMAAKIRATDLMV 296

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +       + K  S EAA  +++A        + A  V  + ++  GG+GY  E  + R 
Sbjct: 297 WDTCELKRQGKRFSVEAAELKLLA-------SRWACEVCDDCIQIFGGNGYSAEFDVERF 349

Query: 434 YRESPANSILLGSGNAMVLDV 454
           YR++    I  G+   + L +
Sbjct: 350 YRDAKLLEIGEGTSEILRLVI 370


>gi|18309079|ref|NP_561013.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|168207714|ref|ZP_02633719.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|168211542|ref|ZP_02637167.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|168215038|ref|ZP_02640663.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|168218168|ref|ZP_02643793.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
 gi|182625955|ref|ZP_02953719.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|18143754|dbj|BAB79803.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13]
 gi|170660951|gb|EDT13634.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987]
 gi|170710483|gb|EDT22665.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC
           3626]
 gi|170713535|gb|EDT25717.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969]
 gi|177908762|gb|EDT71269.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721]
 gi|182379811|gb|EDT77290.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239]
          Length = 378

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 137/378 (36%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P      ++    G+    +   +          + A           
Sbjct: 26  PFAIENDENSTFPI--EAYKKLGELGVIGLPYSTEYGGTGGDYLSYVLAIEEISKVDASM 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S + +  +      +  + K + P I S                    GLTE   G
Sbjct: 84  GIAVSVTTSLCAGGISNASEELKKKYLPDILSG-------------KKLGSFGLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + +  +K  D         +  ++P+S  FI+ A  +   G   +   + +    
Sbjct: 131 SDAGGVITVAEKKGDNYILNGAKCFITNAPLSGTFIVFALTDRTKGPKGLSAFIVEKDFP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G+   ++++K G +S    E+ F++         N+     +  KI +  LD   + V+ 
Sbjct: 191 GISIGKIEDKCGIKSAQVSEVLFNDCVVPAS---NLVGKEGDGFKIAMKTLDGGRIGVAA 247

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  + ++ A    E
Sbjct: 248 QGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYMLYKAAMDKQE 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  S  AA A       K  C   A  V  EA++ +GG+GY+ E  + R  R++    I
Sbjct: 308 GKPYSVSAAKA-------KLVCTDAAMHVTTEAIQMLGGNGYMREYQLERMMRDAKITQI 360

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 361 YEGTNEIQKLIISGSLFR 378


>gi|302524283|ref|ZP_07276625.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302433178|gb|EFL04994.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 387

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 140/408 (34%), Gaps = 34/408 (8%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G Y L+   +EL R A     +     P     D+ E +P      +  +  G +     
Sbjct: 6   GLYQLAEEHEEL-RAAVRALAE-KEIAPYAAEVDEQERYPV--EANQALVKAGFNAVHIG 61

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             ++                      A  + + +      + L  +  + K   P I + 
Sbjct: 62  EEYDGQGADAIGACIVIEEVARVDASASLIPAVNKLGTQPIILSGSEDLKKLVLPSIAAG 121

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E              +    L+E+  G+D A++ ++ +   D         W  ++  S 
Sbjct: 122 E-------------ASASYALSEREAGSDTASMRTRARLDGDHWVLNGTKCWITNAGESS 168

Query: 242 AFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
            + ++A  +         +   +      G      + K+G + + T E+ F N      
Sbjct: 169 WYTVMAVTDPNAEKKANGISAFVVHKDDPGFSVGPKEKKLGIKGSPTREIYFENCTIPAD 228

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
               +   P   +K  +  LD    ++    + +A+     A+ Y + R   G  + D  
Sbjct: 229 ---RIIGEPGTGLKTALRTLDHTRPTIGAQALGIAQGALDAAVAYVKERKQFGKAIADFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+   I AA  L +  A + +    R      A   A   K +   +A +V  
Sbjct: 286 GIQFMLADMGTKIEAARHLVYASAAASERGDKR------ASFTASAAKAYASDVAMSVTT 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A++  GG+GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 340 DAVQLFGGAGYTRDFPVERMMRDAKITQIYEGTNQIQKVVMARALLKG 387


>gi|46201012|ref|ZP_00056039.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 378

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 85/392 (21%), Positives = 146/392 (37%), Gaps = 28/392 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE  R A  +   L    P    WD+    P     LR +   G                
Sbjct: 9   QEAFRQAARDFA-LGEMAPHAAHWDEDGIFPE--ETLRSAAELGFAGIYVREDVGGSALS 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +            A       +S    +A M+    T    + + P + +          
Sbjct: 66  RLDAALIFEELACACPSTAAYISIHNMAAWMIDSFGTEEQRRRFLPDLCAM--------- 116

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
                      LTE   G+D A++ ++ ++  D  Y L+G K F+S    SD ++++ + 
Sbjct: 117 ----RKFASYCLTEPNAGSDAASLRTKAERDGDH-YVLNGTKAFISGGGRSDLYVVMVRT 171

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGP 308
            G  G   +  L+ +    GL + + + K+G +S  T  + F +    +   +     G 
Sbjct: 172 -GGPGPKGISCLVVEAGTKGLSFGKQEKKLGWKSQPTASVIFEDCRVPVANLIGAEGDGF 230

Query: 309 VEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              MK L    ++    S+ G R  L  AI Y  +R   G  +      +  +AD+A ++
Sbjct: 231 KIAMKGLDGGRINIGACSLGGARACLEHAIDYTGQRQQFGQPISAFQATQFKLADMATEL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +  R A S D    +      A +   + K     +  AV   A++  GG GYI+
Sbjct: 291 EAARLMIHRAAQSLDNKSPQ------ATVHCAMAKRLATDVGFAVTDAALQLHGGYGYIK 344

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I R++R+   + IL GS   M + +   L
Sbjct: 345 EYPIERYFRDLRVHQILEGSNEIMRVIIGRAL 376


>gi|39936511|ref|NP_948787.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39650367|emb|CAE28889.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 385

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 140/380 (36%), Gaps = 25/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ +  P    ++R +   G+               +             
Sbjct: 26  EKIAPHALQWDEDKHLPL--DVIREAAALGIGGIYIRDDVGGSAMTRFDAALIFEALATG 83

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +A M+    +    + W PK+ S E                   LTE
Sbjct: 84  CPSVSAFISIHNMAAWMIDSYGSDAQRQRWLPKLCSMEQ-------------VASYCLTE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L+ +
Sbjct: 131 PGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTLVVE 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T  + F N    +   LGD  +             L+  
Sbjct: 190 KDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIG 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L +R A + D
Sbjct: 250 ACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A  +  + K +       V  EA++  GG GY+ E  I +  R+   + 
Sbjct: 310 RKD------ADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEKLVRDLRVHQ 363

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL G+   M L V   L + 
Sbjct: 364 ILEGTNEIMRLIVSRKLLEA 383


>gi|229591322|ref|YP_002873441.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363188|emb|CAY50246.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 390

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   L R+    GL        +        AH +    +   +   
Sbjct: 34  PRAAQIDIDNLFPA--DLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRGSASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +          ++ PK+ S E+                L ++E   
Sbjct: 92  ALSYGAHSNLCVNQINRNGNHEQKLNYLPKLISGEH-------------VGALAMSEPNA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 139 GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDASTYVIYAKTDLEKGPHGITAFIVERDW 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V+ +   +  +  ++S   
Sbjct: 199 KGFSRSNKFDKLGMRGSNTCELFFDDVQVPQENILGVLNGGVKVLMSGLDYERVVLSGGP 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + +  +
Sbjct: 259 TGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACERGE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 319 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETR 390


>gi|170720997|ref|YP_001748685.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169759000|gb|ACA72316.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 387

 Score =  279 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDHDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V  +   +  +  ++S   
Sbjct: 196 QGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|169796342|ref|YP_001714135.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156922|ref|YP_002318967.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483803|ref|YP_002326028.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|301346103|ref|ZP_07226844.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB056]
 gi|301511201|ref|ZP_07236438.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB058]
 gi|301595047|ref|ZP_07240055.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB059]
 gi|332852002|ref|ZP_08433869.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871754|ref|ZP_08440194.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149269|emb|CAM87152.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056082|gb|ACJ40984.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987087|gb|ACJ57386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332729579|gb|EGJ60917.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731224|gb|EGJ62522.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 600

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 92/542 (16%), Positives = 190/542 (35%), Gaps = 71/542 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           +  +   V++EL       +    +  A         ++      G   ++  V     +
Sbjct: 28  LRKYQESVNREL-------IDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G      D  +         +I  + +   +          S  +   + 
Sbjct: 81  KEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIE 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  + +  K+ S  +  T             + LTE   G+D+  I ++ +   D
Sbjct: 141 HHGTEQQKQKFLTKLISGAWTGT-------------MCLTESHAGSDLGLIRTKAEPNPD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLEDG-----SP 267
           G Y ++G K F+S+   D       I+LA++         +  F+VP+   D        
Sbjct: 188 GSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPVGTKGISLFIVPKFNVDDEGNLEDR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G   NAT  L F    G+L+G  N     +        + +A+  ++ 
Sbjct: 248 NKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAA 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             +S   A+ YA+ R                  +I  P ++  +           AL++ 
Sbjct: 308 SEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIVHPAVRSMLMTQKAFSEGGRALAYF 367

Query: 376 LANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA   D      + + +         + PI K +  +         ++  GG G+I E  
Sbjct: 368 LAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGS 478
           + +  R++  +++  G+     LD+L          LL+  T+L +Q  S  +  + L  
Sbjct: 428 MEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFISQHQSNEVLKP 487

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
             +K+  + +  +SL K     A+   E+I    +A+  Y    + +   +L  R     
Sbjct: 488 YLEKLAELKQQWLSLTKSIAEEAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVA 544

Query: 539 HS 540
           H 
Sbjct: 545 HE 546


>gi|126642911|ref|YP_001085895.1| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978]
          Length = 548

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 185/498 (37%), Gaps = 58/498 (11%)

Query: 73  LARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           +A+ A   T  L       G R++  +V     +    R+    G      D  +     
Sbjct: 1   MAKFAQNVTHPLNRTGDEEGARYENGEVFTPAGFKDAFRQYAEGGWIGLGADEEWGGQGM 60

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +   + A  +              SV +   ++   +    + + PKI+S E+  T   
Sbjct: 61  PKMLTVLADEMLFATNPSFMLYPLLSVGAGMALSSYASQEQKETYLPKIYSGEWSGT--- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + LTE   GTD+  I ++ ++  DG Y ++G K F++   +D       +
Sbjct: 118 ----------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKIFITGGDNDLAENIIHL 167

Query: 245 MLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA+          +  F+VP+ L +     G  N +    +++K+G +++AT  + F  
Sbjct: 168 VLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDG 227

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G  N     +  M     L   I  +     +   A  YA  R           
Sbjct: 228 AKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQS 287

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARI 395
                  ++    ++R + ++  +  A+ A +  +    D      +A++  +      +
Sbjct: 288 PSKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVAL 347

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K +    A     +A    GG GYI E  + +  R+     I  G+      D++
Sbjct: 348 LTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLI 407

Query: 456 NL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCKEDKGLARFLTEKIA--- 509
               ++ G     +  + + +D  +     +  ++D+ +    E + + +F+ E+ A   
Sbjct: 408 GRKTIKCGGAFIAEYITEI-RDFANDLDTDLNFIKDATLDAATEIEAITQFIIEQAAENV 466

Query: 510 -LASSAAALYRAGMNDIA 526
              +SAA  Y   +  ++
Sbjct: 467 EFPNSAAVDYLHAVGLLS 484


>gi|5869967|emb|CAB55555.1| auxin binding protein (ABP44) [Pisum sativum]
          Length = 409

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 142/396 (35%), Gaps = 30/396 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ AN N        P   + D   + P    L +      LH     +      + 
Sbjct: 40  ESVAQFANEN------IAPHASKIDHTNYFPQEVNLWKSMGEFNLHGITAPEEYGGLGLG 93

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +    +    + + PK+ S ++      
Sbjct: 94  YLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSHAQKQKYLPKLISGDH------ 147

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+  +  +  ++  G        W  +  ++   ++ A+ 
Sbjct: 148 -------VGALAMSEPNSGSDVVGMKCKADRVDGGYVLNGNKMWCTNGTVAQTLVVYAKT 200

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 201 DITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPDENVLGKEGKGV 260

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M   + L+  ++S   +  M+  L   + Y R+R   G  + +   ++  +AD+   +
Sbjct: 261 YVMMSGLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSL 320

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 321 QSSRSYVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVN 373

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E       R++    I  G+     + +   L K  
Sbjct: 374 EYPTGCLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 409


>gi|5869965|emb|CAB55554.1| Isovaleryl-CoA Dehydrogenase [Pisum sativum]
          Length = 408

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 142/396 (35%), Gaps = 30/396 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ AN N        P   + D   + P    L +      LH     +      + 
Sbjct: 39  ESVAQFANEN------IAPHASKIDHTNYFPQEVNLWKSMGEFNLHGITAPEEYGGLGLG 92

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +    +    + + PK+ S ++      
Sbjct: 93  YLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSHAQKQKYLPKLISGDH------ 146

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+  +  +  ++  G        W  +  ++   ++ A+ 
Sbjct: 147 -------VGALAMSEPNSGSDVVGMKCKADRVDGGYVLNGNKMWCTNGTVAQTLVVYAKT 199

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 200 DITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPDENVLGKEGKGV 259

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M   + L+  ++S   +  M+  L   + Y R+R   G  + +   ++  +AD+   +
Sbjct: 260 YVMMSGLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSL 319

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A   D  K   ++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 320 QSSRSYVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVN 372

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E       R++    I  G+     + +   L K  
Sbjct: 373 EYPTGCLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 408


>gi|83646653|ref|YP_435088.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83634696|gb|ABC30663.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 389

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 137/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   + DK    P  + L  R    GL        F    +   AH +    +   +   
Sbjct: 33  PIAAQVDKDNAFP--NQLWPRLGEMGLLGVTVSEEFGGAELGYLAHVLVMEEISRASASI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    TP   + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIYRNGTPEQRQKYLPKLISGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q  K  D         W  + P +  +++ A+ + + G   +   + +   
Sbjct: 138 GSDVVSMKLQAVKKGDKYVLNGAKMWITNGPDAHTYVIYAKTDVQAGPRGITAFIVERDY 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +K+G R + T EL F N        LG LN     +        +  A   
Sbjct: 198 PGFSRSPKLDKLGMRGSNTCELVFDNCEVPEENILGGLNQGVKVLMSGLDYERVVLAAGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  +    +++  +AD+   + A  A  + +A + D  +
Sbjct: 258 IGIMQACMDAVVPYIHEREQFGQPIGQFQLIQGKVADMYTTLNACRAYLYAVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +C + A  +  +A++ +GG+GYI E S  R  R++    I  
Sbjct: 318 TTRKDAAG-------VILYCAEKATQMALDAIQILGGNGYINEFSTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|146278328|ref|YP_001168487.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556569|gb|ABP71182.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 591

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 101/527 (19%), Positives = 188/527 (35%), Gaps = 71/527 (13%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +   +E  ++A      L+      G R +   V     +     +    G      D  
Sbjct: 38  AAVLEEAGKLARDVLAPLNRVGDTQGCRLENGVVRTPEGFAEAFAQLKDGGWTALDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +         +     +++ A +        +  + S +    T    + W PK+ + ++
Sbjct: 98  YGGQGLPYIMQTAVGEIFVSANMAFNMYQGLTHGAYSAIHTHGTEEQKRTWLPKMVTCDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE   GTD+  + ++ +   DG Y ++G K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSYLITGEKIFISAGDHDLA 204

Query: 242 ---AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+  G       V  F+VP+ L +     G  N +   ++++K+G   NAT 
Sbjct: 205 ENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNEDGSLGDRNHVSVGKIEHKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--- 344
            L +    G+LLG+L+     +  M     L   +   +    +   A+ YAR R     
Sbjct: 265 VLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNAVAYARDRLQGRS 324

Query: 345 -SGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYA 393
            SG          LI  P ++R + D    +  A AL+F  A   D +     +E     
Sbjct: 325 LSGQATTAGAADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRSVRLGDAEAEGLI 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           A +  GG GY+EE  +++  R++    I  G+     LD
Sbjct: 385 SLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           ++                L  D G        ++R   +  KE++  AR       L  +
Sbjct: 445 LVG-------------RKLAADGGKPAMAFFHMIR---AFLKENEEDARLKGFLEPLKQA 488

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           +    +A M      F          +    L G ++   ++  L L
Sbjct: 489 SKDTQKAAM------FFA---EKGIKNPDEALAGSYDFMTMMGHLCL 526


>gi|119774878|ref|YP_927618.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B]
 gi|119767378|gb|ABL99948.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B]
          Length = 578

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 89/477 (18%), Positives = 174/477 (36%), Gaps = 47/477 (9%)

Query: 73  LARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           L   A  N+  +H     G+         +V     +       +  G      D  +  
Sbjct: 44  LEEAAKLNSELVHPINRAGDEEGVGFSDGRVTTPKGYKEAYNAFVEGGWVGLSGDPEYGG 103

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +   +   +    +   A        S +  +A  +    T  +   + PK++S E+   
Sbjct: 104 MGMPKMLGVLVDEMGYSACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEW--- 160

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD----- 241
                     A  + +TE + G+D+  I ++ +   DG Y ++G K F++    D     
Sbjct: 161 ----------AGAMDMTEPQAGSDLRHIRTRAEPQEDGSYLITGSKIFITGGDQDLTENV 210

Query: 242 AFIMLAQVEGR--VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFSNT 294
             ++LA++ G   +  FLVP++  D       PNG+    +++K+G + +AT  + F + 
Sbjct: 211 IHLVLAKISGSNTLSLFLVPKIGVDDQGNLTEPNGVSVGSIEHKMGLKGSATCVMNFDSA 270

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------- 347
            G+L+G  N     +  M     L   I  +   + ++  A  YAR R            
Sbjct: 271 RGWLIGRENKGLACMFTMMNYERLAIGIQGLGSAQAAVQMASDYARERLQGNAVGSTAAA 330

Query: 348 -ILIDQPVMKRAIADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPIT 400
             ++    ++R +        A  AL+        LA   D+   +++   Y  ++ P+ 
Sbjct: 331 DPILVHGDVRRMLLTTRTLTDAGRALAVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVA 390

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +       +   A +  GG GYI E  I +  R++    I  G+     +D L     
Sbjct: 391 KAFLTDRGLDITIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVT 450

Query: 461 GTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
           G NL   ++  +   + L  +  K  ++             +      + AL +S A
Sbjct: 451 GDNLATVKEFIAEHIEVLSDTCDKANSLRVGFADFVAVATWINDNKLSRPALINSVA 507


>gi|150025970|ref|YP_001296796.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772511|emb|CAL43994.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 379

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 132/373 (35%), Gaps = 28/373 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++ E        +++    G    + D  +             +  Y++A +E   +  
Sbjct: 29  IERDEHSKFPTEQVKKMAELGFMGMMVDPKYGGSGLD-------SVSYVLAMVELSKI-- 79

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +++ V +     +      K  + E       P+ K  V     L+E   G+D  +
Sbjct: 80  ---DASAAVVMSVNNSLVCAGLEKYCNEEQKMKYLVPLAKGDVIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   +  +I++AQ +   G   +   + +    G    
Sbjct: 137 QKTTAIDKGDHYLLNGTKNWITNGGTATTYIVIAQTDIEKGHKGINAFIVEKGWAGFEIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSL 332
             + K+G R + T  L F++        +     G    M +   L+   + ++   + +
Sbjct: 197 PKEKKMGIRGSDTHSLMFTDVKVPKENRIGEDGFGFNFAMAV---LNGGRIGIASQALGI 253

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A      A+ YA+ R      + +  V+   +AD+A  I AA  L  + A   D  +  S
Sbjct: 254 ATGAYELALKYAQERIAFKKPIFEHQVIAFKLADMATQIMAAKMLVLKAATEKDAGQDIS 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A A       K +  + A     EA++  GG+GY+ E  + R  R++    I  G+ 
Sbjct: 314 QSGAMA-------KLFASETAMNTTIEAVQIHGGNGYVSEYHVERMMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   L K
Sbjct: 367 EIQRIVISRTLVK 379


>gi|192292303|ref|YP_001992908.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286052|gb|ACF02433.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 385

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 140/380 (36%), Gaps = 25/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ +  P    ++R +   G+               +             
Sbjct: 26  EKIAPHALQWDEDKHLPL--DVIREAAALGIGGIYIRDDVGGSAMNRFDAALIFEALATG 83

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +A M+    +    + W PK+ S E                   LTE
Sbjct: 84  CPSVSAFISIHNMAAWMIDSYGSDAQRQHWLPKLCSMEQ-------------VASYCLTE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L+ +
Sbjct: 131 PGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTLVVE 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T  + F N    +   LGD  +             L+  
Sbjct: 190 KDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIG 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L + + Y + R   G  L +   ++  +AD+A ++ AA  L +R A + D
Sbjct: 250 ACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A  +  + K +       V  EA++  GG GY+ E  I +  R+   + 
Sbjct: 310 RKD------ADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEKIVRDLRVHQ 363

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL G+   M L V   L + 
Sbjct: 364 ILEGTNEIMRLIVSRKLLEA 383


>gi|294341460|emb|CAZ89877.1| Isovaleryl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 392

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 138/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                  R A  +  +     P     D+ +  P    L R+    GL       +    
Sbjct: 11  GEDIAALREAVRDFAE-QEIAPRAAEIDRTDQFPM--DLWRKFGDLGLLGVTVPEADGGT 67

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH +    +   +        + S    + +    +      + PK+ S E+   
Sbjct: 68  GMGYLAHMVALEEISRASASVGLSYGAHSNLCVNQIRRNGSAAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  +  DG        W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADRRGDGFVLNGSKMWITNGPDADVLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPAASSKGITAFLVEKDFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPADNVLGELN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A+++   V  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVKVLMSGLDYERAVLAAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA +L + +  + D        A   R        WC + A  +  E ++  GG+G
Sbjct: 295 TVLQAARSLLYTVGKNLDALGDGH--ARSVRKDCAAVILWCAEKATWMAGEGIQIFGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +  + R +R++    I  G+     + +   L
Sbjct: 353 YINDYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|257066017|ref|YP_003152273.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus
           prevotii DSM 20548]
 gi|256797897|gb|ACV28552.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM
           20548]
          Length = 561

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 79/422 (18%), Positives = 153/422 (36%), Gaps = 40/422 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ +  P    ++++    GL    +   +        H   A           G + S 
Sbjct: 32  DQTKEFP--KEIVKQMGEMGLMGIPFPEEYGGAGLTNQHYAIAVEELSRVDGGVGVICSA 89

Query: 155 SVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +     +         + +               P+       G GLTE+  G+D A 
Sbjct: 90  HTSLGTWGLNEFGNEEQKEKYL-------------RPLLTGKSIGGFGLTEENAGSDSAG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++ P +  +++ A      G   +   + D    G  +
Sbjct: 137 TETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHGISMFIVDKDFEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               +K+G RS+ T EL F +        L     G    M I   LD   + ++   + 
Sbjct: 196 SEPYDKLGIRSSVTAELHFKDVKVPKENLLGEEGKGFKYAMMI---LDGGRIGIASQALG 252

Query: 332 LAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+  + + +     R   G  +         +AD+A ++ AA  L +  A   D     
Sbjct: 253 IAQGAYESAKEYGLAREQFGEAIARMQHNSFILADMATELKAARLLIYDAAQKKDAHVPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++AA A       K +   MA  + ++A++  GGSG+I+   + R+YR+S    I  G+
Sbjct: 313 GKDAAMA-------KLYASDMAEKLTSKALQLYGGSGFIKGVDVERYYRDSKITQIYEGT 365

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              M L +   +       ++     ++     G + + I +       ++K  A+ L E
Sbjct: 366 NEIMRLVISGYILPRPAKKDKKKEAPKKKQSQVGDRKLEIFK------GDEKEAAKKLVE 419

Query: 507 KI 508
            +
Sbjct: 420 AL 421


>gi|212534364|ref|XP_002147338.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
 gi|210069737|gb|EEA23827.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
          Length = 431

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 134/374 (35%), Gaps = 19/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D+    PA   + ++    G      D  +  +    QAH      +   +     
Sbjct: 70  AARTDQQNEFPA--EMWKKFGEAGFLGVTADEEYGGLAMGYQAHCTVLEEISRASGSIGL 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L         + P + S                   L ++E   G+
Sbjct: 128 SYAAHSQLCVNQLSLNANAEQKAKYLPGLISG-------------DKVGALAMSEHSAGS 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  + +  G        W  + P +D  ++ A+ E       +   + + +  G
Sbjct: 175 DVVSMKTTAKAVDGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGISAFIVEKTFKG 234

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG+LN     + +   L  L  +   + 
Sbjct: 235 FSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELNRGVKVLMEGLDLERLVLSAGPLG 294

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R      +    +++  +AD+   +AA+ A ++  A S DE+ + 
Sbjct: 295 IMQSALDLVLPYTHTRKQFNTPIAHNQLIQGKLADMYTKLAASRAYTYATAKSIDESSAA 354

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                           +  + A     +A++ +GG+GYI E    R  R++    I  G+
Sbjct: 355 PSGTLIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 415 SEIRRMVIGRAFNK 428


>gi|254254574|ref|ZP_04947891.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158]
 gi|124899219|gb|EAY71062.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158]
          Length = 393

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 146/407 (35%), Gaps = 35/407 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +++E+L + V +  A+E+A              P     D+ +  P    L ++    G+
Sbjct: 13  EDIEMLRDAVATFAAKEIA--------------PRAAEVDRTDQFPM--DLWKKFGDLGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    T    + +
Sbjct: 57  LGMTVSEEYGGANMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTEAQKRKY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  +  K  D         W 
Sbjct: 117 LPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTDPEAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L    G V+ +   +  + A+++      M   L   + Y   R   G  + +
Sbjct: 224 EVPEENILGQLNGGVKVLMSGLDYERAVLAGGPTGIMAACLDAVVPYIHDRKQFGQAIGE 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+     A  A  + +    D A   SE     R        +  + A  +
Sbjct: 284 FQLIQGKVADMYTTFQACRAYLYAVGRHLDSA--GSEHVRQVRKDCAGVILYTAEKATWM 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 342 AGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|150395712|ref|YP_001326179.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027227|gb|ABR59344.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 593

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 100/514 (19%), Positives = 193/514 (37%), Gaps = 69/514 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LGE ++     E  R A+     L       G R     VE    W  L    I  G +
Sbjct: 30  ELGEDLVDAILGEAGRFASEEVAPLGDAGDRRGARLVGGTVETPEGWRDLYHNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                 ++        H +  A + +         ++P++T  ++ AL    T  +   +
Sbjct: 90  GLTAPEAYGGQNLP--HMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTEVLKSVF 147

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K F
Sbjct: 148 LPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERCDDGTYRIFGQKIF 194

Query: 235 LSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLEDGS-----PNGLCYQRLKNK 278
           ++    D       ++LA++         +  FLVP+ L +G       N L    L++K
Sbjct: 195 ITWGEHDFTDNIVHLVLARLPDAPPGTKGISLFLVPKFLVNGDGSLGARNDLFCHSLEHK 254

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G   + T  + + +          G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHGSPTCTMIYGDGRFGAEKGAVGYLVGEENRGLACMFTMMNNARLAVGMQGVAIAEA 314

Query: 331 SLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YA+ R               +I+ P + R +  +      + A+++  A++ D
Sbjct: 315 ATQKAIAYAKERRQGRAPGWSGEGMSPIIEHPDVARMLLTMKALTQGSRAIAYACAHAVD 374

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                E +        + ++ PI K +       V +  ++  GG G+IEE   AR+ R+
Sbjct: 375 MAHFAEGEEARHWQERSSLLTPIAKSFATDAGVDVASLGVQVHGGMGFIEETGAARYLRD 434

Query: 437 SPANSILLGSGNAMVLDVLNL---LEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSI 491
           +    I  G+     +D++     L  G ++  F      +   + +S +K        +
Sbjct: 435 ARIAPIYEGTNGIQAIDLVTRKLPLSDGAHVRGFIAELREVTAAVAASNRKGFGETAARL 494

Query: 492 SLC-KEDKGLARFLT-----EKIALASSAAALYR 519
                + +G   +L       K+A A + A  Y+
Sbjct: 495 DAAIADLEGATAWLLSAIRDGKLAEALAGATAYQ 528


>gi|302525612|ref|ZP_07277954.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302434507|gb|EFL06323.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 136/360 (37%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL C      +       AH+         A   A  +   S   A  + 
Sbjct: 43  REIWTKAGELGLLCLSIPEEYGGGGGTFAHEAVLYEEQARAGDSAWGVTVHSGIVAHYIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W PK+ + E             +   + +TE   G+D+  I ++  +  D
Sbjct: 103 AYASEEKKREWLPKMATGE-------------LVGAVAMTEPGTGSDLQNIKTRAVRDGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++      +++A + +   G   V  ++ + +  G    R+ +K+G +
Sbjct: 150 H-YVINGAKTFITNGFHSDLVVVACKTDPDAGAQGVSLIVVETNTPGFRRGRVLDKVGLK 208

Query: 283 SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T EL F +        L      G ++ M  L    L  A+ +V+G+  ++   I Y
Sbjct: 209 GQDTAELFFDDVRVPAANLLGDAEGQGFIQLMLQLPQERLIIAVTAVAGLEAAVNLTIDY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + +    K  +A+ A + A + A         D+   R          A 
Sbjct: 269 TKERTAFGRPIFNFQNTKFKLAEAATEAAVSRAF-------LDQCIERHLRGELDVQGAA 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K W  +    V+ + ++  GG GY+ E  IAR + +   + I  G+   M   +   L
Sbjct: 322 MAKLWTTERVNKVVDDCLQLFGGYGYMTEYPIARAWADVRISRIFGGTSEIMKEIISRTL 381


>gi|237800684|ref|ZP_04589145.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023543|gb|EGI03600.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 387

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 141/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + DK    P    + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAELSPRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +    T      + PK+ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGTLAQKARYLPKLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDHYVLNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 174 YAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGAL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  +AD+
Sbjct: 234 DGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|126458000|ref|YP_001075993.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|167828597|ref|ZP_02460068.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850057|ref|ZP_02475565.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           B7210]
 gi|226196041|ref|ZP_03791627.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242312155|ref|ZP_04811172.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254194351|ref|ZP_04900783.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|254301556|ref|ZP_04969000.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|126231768|gb|ABN95181.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|157811141|gb|EDO88311.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|169651102|gb|EDS83795.1| putative isovaleryl-CoA dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|225931934|gb|EEH27935.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242135394|gb|EES21797.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 393

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 128/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRRYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +             W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVGMKLRAEPRGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAGG 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S        R        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 317 SAHPRQ--VRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|316935219|ref|YP_004110201.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602933|gb|ADU45468.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 390

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 144/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P  E  DK    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRETVRDFAANEIAPRAEAIDKTNTFP--RDLWPKLGALGLHGITVEEDYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         + + PK+ S E+  
Sbjct: 70  AGLGYLEHCIAMEEISRASASVGLSYGAHSNLCINQIRRNGNEAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMKTRAEKKGDRYVLNGNKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPAAGPRGMTAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   V  M+  +   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPVGIMQACMDVVMPYVHERKQFGEPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YVTMNASRAYVYAVAKACDRGETTREDAAGA-------ILYAAERATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|226287036|gb|EEH42549.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 434

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 141/398 (35%), Gaps = 28/398 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           + +   A    P+         R D     PA   +  +    G      D  +  +   
Sbjct: 54  ERVQEFARREIPE-----EVAARTDLQNNFPA--EMWGKLGKAGFLGVTADEQYGGLSMG 106

Query: 131 QAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                   R     Q+ +  L   + S    + ++L   P     + P + S E      
Sbjct: 107 YQAHCVFWRKSAEHQVRSIGLSYAAHSQLCVNQLSLNGNPEQKAKFLPSLISGE------ 160

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                      L ++E   G+D+ ++ +  + +  G        W  + P +D  ++ A+
Sbjct: 161 -------KVGALAMSEHSAGSDVVSMKTTAKAVDGGYLLNGTKMWITNGPDADYIVVYAK 213

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
            +   G   +   + + +  G    R  +K+G R + T EL F + F     +LG++N  
Sbjct: 214 TKPDAGSKGITAFVVEKTFKGFSCSRKLDKLGMRGSNTGELIFDDVFVPQENVLGEVNRG 273

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +   L  L  +   +  M+ +L   + Y   R      +    +++  +AD+   
Sbjct: 274 VKVLMEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQFDAPIAHNQLIQGKLADMYTK 333

Query: 366 IAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           ++A+ A ++  A   D+A +        A  +        +  + A     +A++ +GG+
Sbjct: 334 LSASRAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAILYAAERATECALDAIQLMGGN 393

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+ E    R  R++    I  G+     + +     K
Sbjct: 394 GYVNEIPAGRLLRDAKLYEIGAGTSEIRRMLIGREFNK 431


>gi|78043629|ref|YP_360435.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995744|gb|ABB14643.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 580

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 91/455 (20%), Positives = 172/455 (37%), Gaps = 35/455 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           ALLR++   GL       ++  +   +   +            A    + +      +  
Sbjct: 62  ALLRKAGELGLLSVDIPEAYGGMELDKVSTVIVTENVSGQGSFATAHGAHTGIGTLPIVY 121

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K + P + S E                   LTE   G+D  A  ++     DG
Sbjct: 122 FGTEEQKKKYLPGLASGE-------------KLAAYCLTEPGSGSDALAAKTKAVLSEDG 168

Query: 225 -IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D FI+ A+V+G          + +    G+ +   + K+G +
Sbjct: 169 KYYILNGTKQFITNAGFADVFIVYAKVDGDK----FTAFIVERDFPGVSFGPEEKKMGIK 224

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++   +    +   L  V  G V    IL               +++L+ A+ YA
Sbjct: 225 GSSTRQVILEDVKVPVENVLGEVGKGHVIAFNILNIGRFKLGAGCAGSCKLALSTAVKYA 284

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYA 393
             R   G  + +  ++K  I  +A    AA ++ +R A   D+       KS +E A   
Sbjct: 285 NERSQFGQPIANFGLIKNKIGRMAAYTFAAESMVYRTAGMMDKILGDVKGKSGAEVAKGI 344

Query: 394 RIMA---PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              A    I K +  +    V+ E ++  GG GY +E    R YR++  N I  G+    
Sbjct: 345 EEYAIEYSINKVFASEALDFVVDETVQIFGGYGYTQEYPAERMYRDARINRIFEGTNEIN 404

Query: 451 VLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
            L +   LL K       L + +++ +G     +   + D   L +E + ++R   +K+A
Sbjct: 405 RLIIPAQLLRKAQKGQLPLLAAVQKLMGEIVAPL-PPVEDVSGLNREKEAISR--AKKLA 461

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           L ++  A+ +       +  +     D     + M
Sbjct: 462 LMAAGLAVQKFKEKIEQEQEVLGMIADMAIEIYAM 496


>gi|327404135|ref|YP_004344973.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327319643|gb|AEA44135.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 379

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 139/384 (36%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD  E  P    +++     GL        +            A    LM 
Sbjct: 22  RQIRPNMNKWDAEEHFPV--DIMKEMGKLGLLGIYIPEQYGGSGFSYMEYATA----LME 75

Query: 145 QLEAGHLMSPSVTSAS-----MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             +    +  SV + +      +         K + PK+ S E+                
Sbjct: 76  LGKVCGGIGLSVAAHNSLCTGHIYYHGNEEQKKKYLPKLTSGEF-------------IGA 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G+D   +     K  D         W       D  ++L +    +    + 
Sbjct: 123 WGLTEPNTGSDAMRMKCTAVKDGDYWVVNGAKNWITHGLSGDVAVVLIRTGELLDSNGIT 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
             + +    G    ++K+K+G R++ T EL F N        +  V  G  + M IL   
Sbjct: 183 AFIVEKGTPGFSAVKIKDKLGVRASETAELIFDNVRLHESQVIGEVGQGFKQAMHILDGG 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A +S    R +   ++ YA+ R   G  +     +   +AD+A ++ AA  L+F+ 
Sbjct: 243 RISIAALSCGIARGAYEASVKYAKEREQFGQPIGKFQAIGFKLADMATEVEAAELLTFQA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  +  +  + + A+A       KY+  +++     EA++ +GG GY +E    +  R+
Sbjct: 303 ADYKNRNQKMTTQGAFA-------KYFASEVSVRCGNEAVQIMGGYGYTKEYPAEKFLRD 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +   +I  G+     L +   L K
Sbjct: 356 AKLMTIGEGTSEIQKLVISRELLK 379


>gi|313646339|gb|EFS10801.1| aidB domain protein [Shigella flexneri 2a str. 2457T]
          Length = 296

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/300 (37%), Positives = 160/300 (53%), Gaps = 8/300 (2%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTIFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M
Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294


>gi|229592983|ref|YP_002875102.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364849|emb|CAY52897.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 589

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 95/498 (19%), Positives = 178/498 (35%), Gaps = 55/498 (11%)

Query: 55  HKELELLGE-----YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHAL 106
           H     LG       ++    +E A+        L+      G  +D   V     +   
Sbjct: 22  HGHYAALGATDASPDMVGAILEEGAKFCENVLAPLNRSGDEEGCHFDNGVVTTPKGFKEA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             + +  G H    D ++      Q+  +  + +   +    G     +  + S +    
Sbjct: 82  FAQYVEGGWHGVAADPAYGGQGLPQSLGLVLSEMIGSSNTSWGMYPGLTHGAMSAIHAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      +  K+ + E+  T             + LTE   GTD+  I ++    +DG Y
Sbjct: 142 TAEQKDTYLSKLTAGEWTGT-------------MCLTEAHCGTDLGLIKTRAVPQADGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-GSPNGLCYQR 274
            ++G K F+S+   D       ++LA++         +  F+VP+   D G  N +    
Sbjct: 189 AVTGSKIFISAGEHDMSVNIIHLVLAKLPDAPAGTKGISLFIVPKFHADSGERNAVHCGS 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G + +AT  L F    GFL+G+ N     +  M     L + +  +     S   
Sbjct: 249 IEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHARLGTGMQGLCNGEASFQG 308

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           AI YA  R                  +I  P ++R +  +        AL++  A   D 
Sbjct: 309 AIKYANDRLQMRSLTGAKAPEKAADPIIVHPDVRRMLLTMKAFNEGNRALTYFTAQLLDT 368

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A  R +       + PI K +       V    M+  GG GYI E  + +  R+
Sbjct: 369 AHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHGYIREWGMEQLARD 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+     LD+L     G    L       + +  G++ +     L+  ++  
Sbjct: 429 ARIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTRIVHKFCGANAEH--PQLKAYVAQL 486

Query: 495 KEDKGLARFLTEKIALAS 512
            +  G    LT ++ +A+
Sbjct: 487 NQLNGEWGELTTQVGMAA 504


>gi|88705176|ref|ZP_01102887.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88700266|gb|EAQ97374.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 557

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 83/475 (17%), Positives = 177/475 (37%), Gaps = 55/475 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+ A      L+      G  W +  V+    +    ++ + +G      
Sbjct: 37  DLMNAIIEEGAKFAENVLSPLNQSGDEEGCVWSEEGVKTPEGFAEAYKQYVDNGWPSLSA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
           +  F          I      L        LM P ++   +  L    +P     + PK+
Sbjct: 97  EPEFGGQDMPNMLGIVI--NELAGTANWSWLMYPGLSHGCIKTLEAHGSPEQKAQYLPKL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            +  +  T             + LTE   G+D+  + ++ +  +DG Y ++G K F+S+ 
Sbjct: 155 VAGNWTGT-------------MCLTESHCGSDLGLLRTKAEPQADGSYAITGTKIFISAG 201

Query: 239 MSD-----AFIMLAQ------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I++A+          +  F+VP+   +     G  NG+    ++ K+G +
Sbjct: 202 EHDMSDNIVHIVIARMPDAPEGTKGISLFVVPKFNVNEDGSLGERNGVHCASIEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    G+L+G+ N     +        + +AI  ++   +S   ++ YAR R
Sbjct: 262 ASATCVMNFDGAKGYLIGEPNRGLNMMFTFMNTARIGTAIQGLAHAELSYQGSLEYARER 321

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                             +I  P ++R +         + A+ + LA   D      EEA
Sbjct: 322 LAMRSLTGPKNPDGPADPIIVHPDVRRMLLTQKAIAEGSRAMLYYLAQLGDIVDRGDEEA 381

Query: 391 A-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           A        ++ PI K +  +         ++  GG G+I E  + +  R++   ++  G
Sbjct: 382 AKKADDLMAVLTPIAKAFVTEAGLEAANHGIQIYGGHGFIREWGMEQIARDARIATLYEG 441

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +     LD++   +L  G  L       + + + ++  +        ++  K++ 
Sbjct: 442 TTGIQALDLIGRKVLGSGGKLLMGFTEMMGEFVEANSDEAYAEFTGPLATYKDEW 496


>gi|114565833|ref|YP_752987.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336768|gb|ABI67616.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 379

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 78/402 (19%), Positives = 154/402 (38%), Gaps = 39/402 (9%)

Query: 69  TAQELARMANYNTPQL--HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QEL R    N  +L      P     D+   +PA   ++ +    G     +   +  
Sbjct: 7   EEQELIRE---NIRELVKKYLDPIAVEIDESSRYPA--EVIEQLAAGGWMGMPYPVEYGG 61

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ +    +          +   +  ++  +         + +           
Sbjct: 62  AGLDYVSYAMVIEEISRSCAATGFTVSCHTSLASGPIFNFGNEEQKQKYL---------- 111

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFI 244
               P+ K        +TE   GTD+ A T+      D  Y L+G K F S+  ++D F+
Sbjct: 112 ---VPLAKGQHIGAFAVTEPGAGTDVGAATTTATLDGD-SYVLNGIKTFTSNGPVADTFV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A  +  +G   +   +      GL   +   K+G R++ T E+   +         ++
Sbjct: 168 VFAFTDKSLGGKGMSAFIISKDNPGLKVGQHFYKMGIRASQTSEIILKDCRVP---REDL 224

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                + ++I +       +  A  +V   + +L E+I Y+++R   G  +     ++  
Sbjct: 225 LGKEGQGLQIAMSSFDHGRIGIAAQAVGITQAALDESISYSKQRVQFGKPISKNQAIQWM 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+A DIAAA  L    A   D+ +  S+EAA A       K +  +M+    ++A++ 
Sbjct: 285 IADMATDIAAARFLYSYAAFLKDQKQPFSKEAAMA-------KVFAAEMSTRHTSKAVQI 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GYI+ + + R  R++    I  G+  A  + +   L +
Sbjct: 338 HGGYGYIKGQKVERLMRDAKITEIYEGTSEAQRMVIAGNLLR 379


>gi|153000792|ref|YP_001366473.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151365410|gb|ABS08410.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 585

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 101/489 (20%), Positives = 184/489 (37%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKAVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEALKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRNIRTRALPQDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +        NG+    +++K+G + +AT  + F N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLANANGVSVGSIEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVA 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|324515384|gb|ADY46184.1| Short/branched chain specific acyl-CoA dehydrogenase [Ascaris suum]
          Length = 420

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 121/307 (39%), Gaps = 30/307 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++    T    + +  +I S                     L+E   G+D  A+ +  
Sbjct: 132 APLIIEYGTEVQKEKYLRRIHS--------------DWIGSFCLSESTSGSDAFALKTTA 177

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D         W  ++  +  FI++A V+  +G   +   L D    G+   + ++K
Sbjct: 178 KKDGDDYVITGSKMWTSNAANAHFFIVMANVDPSMGYKGITTFLVDRHLKGVEVGKKEDK 237

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI- 336
           +G R+++T  + F +          V        KI I  L++  + +    V LAE   
Sbjct: 238 LGIRASSTCPVHFDDVRVNKDM---VLGEVGNGYKIAIECLNAGRIGIGAQMVGLAEGCF 294

Query: 337 ----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y + R      +ID   ++  IADIA  I  A  L +  A   + +    +EAA 
Sbjct: 295 EATIPYLQERKQFNKRIIDFQGIQHQIADIATQIETARLLVYNTARMKEASIDYVKEAAM 354

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+  + +        A    ++ +E +GG G+ +   + ++YR+    +I  G+ N  + 
Sbjct: 355 AKWYSSVV-------ATNTTSKCIEWMGGVGFTKSYPVEKYYRDCKVGTIYEGTSNIQLN 407

Query: 453 DVLNLLE 459
            +  L++
Sbjct: 408 TIAKLID 414


>gi|315024180|gb|ADT71661.1| putative acyl-CoA dehydrogenase [Mycobacterium chubuense NBB4]
          Length = 392

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 115/380 (30%), Gaps = 26/380 (6%)

Query: 85  HAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+   +       L      G         +                   
Sbjct: 35  KQIGPHAANVDEEARYTD---EALAALTSSGFAAIHVPEEYGGQGGDSVAACIVVEEVAR 91

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               +  +   +      + L  +  + K   P I + E                   L+
Sbjct: 92  VCASSSLIPICNKLGTMGLLLRGSEELKKQVLPSIANGE-------------AVASYALS 138

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E+  G+D  ++ ++     D         W  +   S  + ++A  E   G   +   + 
Sbjct: 139 EREAGSDAGSMRTRAWLKGDEWVLNGAKCWISNGGHSTWYTVMAVTEPDKGANGISAFVV 198

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
                G      + K+G + + T EL F N       ++GD                   
Sbjct: 199 HKDDPGFVVGAKERKMGIKGSPTTELYFENCRIPGDRIIGDPGTGFKTALATLDHTRPTI 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              +V   + +L   I Y + R   G  + D   ++  +AD+A+ + AA  + +  A   
Sbjct: 259 GAQAVGIAQGALDATIAYVKERKQFGKAIADFQAVQFMLADMAMKLEAARLMVYTAAARA 318

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +           ++  +K +   +A  V   A++  GG GY  +  + R  R++   
Sbjct: 319 ERGEPN------LGFISSASKCFASDVAMDVTTNAVQLFGGYGYTRDFPVERFMRDAKIT 372

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L +
Sbjct: 373 QIYEGTNQIQRVVMSRALLQ 392


>gi|209546464|ref|YP_002278382.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537708|gb|ACI57642.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 375

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG  + D+    P     L+     GL   +   ++            A           
Sbjct: 24  PGAAKRDREHLFP--REELKEMGELGLLGMLVPEAYGGSDTGVIAYAAALEEIAAGDGPC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L   T    + + PK+   E+               G  LTE + 
Sbjct: 82  STIMSVHSSVGCVPILKFGTEEQRQRFLPKLAGGEW-------------IGGFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + + ++ ++  D        ++  S    +  I+ A  +   G   +   +     
Sbjct: 129 GSDASNLKTRARRDGDHYVIDGAKQFITSGKNGNVIIVFAVTDPDAGKKGITAFIVPTDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R++ K+G  S  T ++ F+     +   L     G    +  L    +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHSTDTCQIAFNAMRIPVALRLGAEGEGYRIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA+ R   G  + +   +   +AD+A+ I AA  L F  A   +   
Sbjct: 249 VGMARAAFEAARDYAKERTAFGKPIFEHQAVAFRLADMAVRIEAARQLVFHAAALREAEL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +  +MA  V ++A++  GG GY+ +  + R YR+     I  
Sbjct: 309 PCLQEASMA-------KLFASEMAERVCSDAIQIHGGYGYMADYPVERIYRDVRICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDVQRMVIARNL 375


>gi|15610933|ref|NP_218314.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis H37Rv]
 gi|15843419|ref|NP_338456.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31794970|ref|NP_857463.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium bovis AF2122/97]
 gi|121639714|ref|YP_979938.1| putative acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663665|ref|YP_001285188.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|167967229|ref|ZP_02549506.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|215413724|ref|ZP_03422392.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215432778|ref|ZP_03430697.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|218755585|ref|ZP_03534381.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis GM 1503]
 gi|219559886|ref|ZP_03538962.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T17]
 gi|224992209|ref|YP_002646899.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800845|ref|YP_003033847.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435]
 gi|254366343|ref|ZP_04982387.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552912|ref|ZP_05143359.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184722|ref|ZP_05762196.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|260198845|ref|ZP_05766336.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289441234|ref|ZP_06430978.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289445398|ref|ZP_06435142.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|289556064|ref|ZP_06445274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605]
 gi|289572047|ref|ZP_06452274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17]
 gi|289755930|ref|ZP_06515308.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|289763982|ref|ZP_06523360.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503]
 gi|297636479|ref|ZP_06954259.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207]
 gi|297733473|ref|ZP_06962591.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN R506]
 gi|298527272|ref|ZP_07014681.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|307086596|ref|ZP_07495709.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012]
 gi|313660804|ref|ZP_07817684.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950416|emb|CAA17861.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE35 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883787|gb|AAK48270.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31620568|emb|CAD96012.1| PROBABLE ACYL-COA DEHYDROGENASE FADE35 [Mycobacterium bovis
           AF2122/97]
 gi|121495362|emb|CAL73849.1| Probable acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134151855|gb|EBA43900.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507817|gb|ABQ75626.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra]
 gi|224775325|dbj|BAH28131.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253322349|gb|ACT26952.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435]
 gi|289414153|gb|EFD11393.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46]
 gi|289418356|gb|EFD15557.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A]
 gi|289440696|gb|EFD23189.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605]
 gi|289545801|gb|EFD49449.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17]
 gi|289696517|gb|EFD63946.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054]
 gi|289711488|gb|EFD75504.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503]
 gi|298497066|gb|EFI32360.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308364008|gb|EFP52859.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012]
 gi|328460573|gb|AEB05996.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207]
          Length = 593

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 139/530 (26%), Positives = 227/530 (42%), Gaps = 57/530 (10%)

Query: 33  GMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N Y +D  L  ++A +      +     L  +GE       +  A   + N P+L  Y
Sbjct: 33  GLNWYLTDPTLQFIMAYYLRPDELAFAEPHLTRIGELTGGPVTR-WAEETDRNPPRLERY 91

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G    +V    ++    R  I          R        +      A  YL+ Q +
Sbjct: 92  DRWGHDISRVVLPESFIQSKRAVIEARQAV----RDDAARAGVKPSLALFAADYLLNQAD 147

Query: 148 ---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  L +      S+V     P V +    K+ S E+D                 LTE
Sbjct: 148 IGMACALATGGNMVRSLVTAYAPPDVREFVLGKLNSGEWDGE-----------AAQLLTE 196

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLV 258
           + GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  FLV
Sbjct: 197 RAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVATFLV 255

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGPV 309
            R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                  +
Sbjct: 256 LRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGLTRM 315

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+ AA
Sbjct: 316 MELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDVEAA 375

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+ F    + +  + R      A    P+TK   C++   V ++A+E  GG+GYIE   
Sbjct: 376 LAMVFDGFGAANHRQPRCLPQRIA---VPVTKLKTCRLGITVASDAIEIHGGNGYIETWP 432

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------- 481
           +AR  R++  N+I  G  N + LDV   +E+ T   E L + L   +  S          
Sbjct: 433 VARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARLRDAVSVSDDDDTTRLVS 491

Query: 482 KVITILRDSISL---CKEDKGLARF--LTEKIALASSAAALYRAGMNDIA 526
           + I  L  +I+           AR   L + +    + A L      + A
Sbjct: 492 RRIEDLDAAITAWTKLDRQLAEARLFPLAQFMGDVYAGALLTEQAAWERA 541


>gi|169629167|ref|YP_001702816.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169241134|emb|CAM62162.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 381

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 78/411 (18%), Positives = 139/411 (33%), Gaps = 40/411 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             ++ EL  L +      + ELA  AN    Q H         D+         L  R+ 
Sbjct: 7   PWMNAELLELRDLAAKFFSAELAPHANRFADQHH--------VDR--------ELWNRAG 50

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +    T  + 
Sbjct: 51  ELGLLCMSIPEEYGGGGGTFAHEAVVLEEQARIGDSSWGAGLHSGIVAHYILQYATEELR 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W PK+ S E                 + +TE   G+D+ ++ ++     D        
Sbjct: 111 AQWLPKMASGEM-------------IGAIAMTEPGTGSDLQSVKTKALLDGDEYVITGSK 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R   T EL F
Sbjct: 158 TFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRGQDTSELFF 217

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L      G ++ M  L    L  A+ +V+ M ++L + + Y R R   G 
Sbjct: 218 DEVRVPRSHLLGQAEGQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKYTREREAFGR 277

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A+ A +   A        +     +   +  A A+        W  + 
Sbjct: 278 PVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQTVAMAKW-------WTTER 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V+ + M+  GG GY+ E  I+R + +     I  G+   M   +   L
Sbjct: 331 AMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVMKEIISRSL 381


>gi|194899891|ref|XP_001979491.1| Arc42 [Drosophila erecta]
 gi|190651194|gb|EDV48449.1| Arc42 [Drosophila erecta]
          Length = 405

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 145/378 (38%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NAAKFDREHLYPE--KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDSQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W  ++  ++A I+ A    ++    +   +   +  
Sbjct: 154 SDAGAASTIAIDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATK 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G R ++T +L F +    ++   N+   P    KI +  LD+  + ++G
Sbjct: 214 GFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAG 270

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 331 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 383

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 384 YEGTSEIQRLVIAGSILK 401


>gi|330505312|ref|YP_004382181.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919598|gb|AEB60429.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 592

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 104/568 (18%), Positives = 199/568 (35%), Gaps = 88/568 (15%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWHALLR 108
            EL  L E V   TA  +   A   T     P   +    G  WD   V+    +    R
Sbjct: 26  AELPALAEVVDEDTANAILEEAGKVTAGSIAPLNRSGDEEGCSWDNGNVKTPAGFPEAYR 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G         F  +   +    +   +   A L  G     +  +   +    + 
Sbjct: 86  TYAEGGWVGVGGAPEFGGMGMPKVIGAQVEEMVNSASLSFGLYPMLTSGACLSILNHASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ELKQQYLPNMYAGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP+++ +     G  N L  
Sbjct: 193 SGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNADGSLGEKNALGC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+L+G++N     +  M     L   I  +S    S 
Sbjct: 253 GSIEHKMGIKASATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLGVGIQGLSLGERSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             AI YAR R  S               +I  P ++R +  +        A S  +A   
Sbjct: 313 QSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAMQL 372

Query: 381 DEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D AK   ++A          ++ P+ K +   MA        +  GG G+I E    +  
Sbjct: 373 DTAKYSEDKATAKRADELVALLTPVAKAFLTDMALETTVHGQQIFGGHGFIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R+     I  G+     LD++   ++  G + ++     ++  +GS+   +    +   +
Sbjct: 433 RDCRITQIYEGTNGIQSLDLVGRKIVGSGGSYYKHFADEIKAFVGSADASLAEFTQPLAA 492

Query: 493 LCKEDKGLARFLTEKI-----------ALASSA----------AALYRAGMN-DIADVFL 530
             +    L  ++ ++                 A          A + RA +  +  D F 
Sbjct: 493 AVQNLDELTAWVVDRAQSNPNEIGAASVEYLQAFGYTAYAYMWALMARAALGKEGQDEFY 552

Query: 531 ENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            ++              RF  A ++  +
Sbjct: 553 ASKLG----------TARFYFARLLPRI 570


>gi|170723989|ref|YP_001751677.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169761992|gb|ACA75308.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 592

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 102/562 (18%), Positives = 200/562 (35%), Gaps = 68/562 (12%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWH 104
           + +  +L  L E V + TA  +   A   T     P   A    G  WD   V     + 
Sbjct: 22  AELWAQLPELAETVDAQTALAVLEEAGKVTSKSIAPLSRAADEEGCHWDNGAVSTPVGFI 81

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
                    G      D  +  +   +A   +   +   + L  G     +  +   +  
Sbjct: 82  EAYNTYAEGGWVGVGGDPQYGGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINA 141

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + + P ++S  +             A  + LTE   GTD+  I ++ +  +DG
Sbjct: 142 HASETLREKYLPNMYSGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADG 188

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPN 268
            Y +SG K F++    D       ++LA++         +  FLVP+ L +     G+ N
Sbjct: 189 SYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNDDGSLGARN 248

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                 +++K+G +++AT  + F    G+++G+ N     +  M     L   I  ++  
Sbjct: 249 PATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLATA 308

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
             S   A+ YAR R  S               +I  P ++R +  +   I    A S  +
Sbjct: 309 ERSYQNAVEYARDRLQSRAPTGPQAKEKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYV 368

Query: 377 ANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   D AK      +R        ++ P+ K +   +         +  GG GYI E   
Sbjct: 369 AMQLDSAKYSEEPGTRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQ 428

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +  R+     I  G+     LD++   ++  G   ++     + Q + S+G  +   ++
Sbjct: 429 EQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSEEIRQFIASAGGDLDEFVK 488

Query: 489 DSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMNDIADVFLENRF--------LD 536
              +   +  GL  ++ E+         +A+  Y      +A  ++             D
Sbjct: 489 PLGAYLDQLDGLTEWVLEQAKGNPNEIGAASVEYLHAFGYVAYAYMWALMARAAKAGEGD 548

Query: 537 NCHSTHCMLHGRFNAAHIIDSL 558
               +  +   RF  A ++  +
Sbjct: 549 EAFYSAKLGTARFYFARLLPRV 570


>gi|304392107|ref|ZP_07374049.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303296336|gb|EFL90694.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 390

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 138/383 (36%), Gaps = 33/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+  + P    ++R +   G+               +   +             
Sbjct: 34  PFAVQWDQDRYLPM--DVVRETAGLGMGGLYVREDVGGSGLSRLDSLVVFEALAQGCPAL 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+ +  T    + W PK+ S               V     LTE   G
Sbjct: 92  SAFISIHNMVAWMIDVNGTEEQRQHWLPKMTSM-------------DVVASYCLTEPGSG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  K  +  Y LSG K F+S   ++  + ++A+     G   V   L +   
Sbjct: 139 SDAAALKTKAVKDGNE-YVLSGTKQFISGAGTNGLYAVMARTSDD-GAGGVSCFLIEDGT 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G     T ++   +         N+  G     +I +       L+  
Sbjct: 197 PGLSFGPQEKKMGWHVQPTAQVILDDCRVPP---ANMLGGEGNGFRIAMSGLDGGRLNIG 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             SV G +++L +A  YA  R   G  +      +  +AD+A ++ AA  L +  A   D
Sbjct: 254 ACSVGGAQLALEKAQAYATERSAFGKPIGQFQATQFKLADMATELEAARVLLYSAAAKLD 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A     + K +       V  +A++  GG GY+ +  + +  R+   + 
Sbjct: 314 AKAPD------ATKACAMAKRFATDTGSKVANDALQIFGGYGYLADYGVEKIVRDLRVHQ 367

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           IL G+   M + +   +EK    
Sbjct: 368 ILEGTNEIMRVIISRAMEKEAAA 390


>gi|90424584|ref|YP_532954.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90106598|gb|ABD88635.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 382

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 143/377 (37%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ ++ P    ++R++   G+               +             
Sbjct: 23  ERIAPHALQWDQDKYFPV--EVIRQAAALGMAGIYIRDDVGGSAMTRFDAALIFEALAQG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+           W PK+ S E             +     LTE
Sbjct: 81  CPTVSAFISIHNMASWMIDAYGNAEQRNKWLPKLCSME-------------LIASYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   +    ++    G  G   +  L+ +
Sbjct: 128 PGSGSDAAALRTRAVRDGDH-YVLNGQKQFISGASAAGLYVVMVRTGGEGAGGISTLVVE 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
           G   GL +   + K+G  +  T  + F N        LG+  +             ++ A
Sbjct: 187 GDTPGLSFGANERKMGWNAQPTCAVMFDNARVPAANRLGEEGIGFKIAMAGLDGGRINIA 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +++ Y ++R   G  L +   ++  +AD+A ++ AA  L +R A + D
Sbjct: 247 ACSLGGAQSALDKSLSYMKQRKAFGKRLDEFQALQFRLADMATELEAARTLVWRAAAALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 307 RKDHD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQ 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 361 ILEGTNEIMRLIVARKL 377


>gi|194391390|dbj|BAG60813.1| unnamed protein product [Homo sapiens]
          Length = 330

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 125/305 (40%), Gaps = 30/305 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    T      + P++               T       L+E   G+D  A+ ++  K
Sbjct: 47  LIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKTRADK 92

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  S+  +  F+++A V+  +G   +   L D    GL   + +NK+G
Sbjct: 93  EGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLG 152

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI--- 336
            R+++T  L F N       + N+        K  I  L+   + ++   + LA+     
Sbjct: 153 LRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDY 209

Query: 337 --HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              Y + R   G  L D   ++  +A +A  + AA  L++  A   +  K   +EA+ A 
Sbjct: 210 TIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMA- 268

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  +  +
Sbjct: 269 ------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTI 322

Query: 455 LNLLE 459
              ++
Sbjct: 323 AKHID 327


>gi|118384792|ref|XP_001025535.1| Acyl-CoA dehydrogenase, middle domain containing protein
           [Tetrahymena thermophila]
 gi|89307302|gb|EAS05290.1| Acyl-CoA dehydrogenase, middle domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 455

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 133/380 (35%), Gaps = 26/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  E  DK    P  + L +   + GL  +     +        AH +    +   
Sbjct: 96  ETVAPLAEETDKKNSFP--NQLWKEFGNLGLLGATVPVEYGGSGLNYSAHCMIMEEISRA 153

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + +      +    T    K + PK+ S E+                L ++
Sbjct: 154 SGSIGLSYGAHTALCVGQIERNGTEEQKKKYLPKLCSGEH-------------IGALAMS 200

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K  +         W  + P +D  ++ A+ E  +    +   + 
Sbjct: 201 EPGAGSDVVSMKLKAEKRGNKYVLNGNKMWITNGPDADVLVVYAKTEPELKQKGITAFII 260

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           +    G    +  +K+G R + T EL F N        LG  N     + D      L  
Sbjct: 261 EKGYKGFSTAQKLDKLGMRGSNTCELIFDNVEVPEENILGGYNKGVYVLMDGLDYERLVL 320

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V  M+ ++     Y + R   G  +    +M+  +AD+ + + ++ A+ +  + + 
Sbjct: 321 AAGPVGLMQAAVDYVTPYLKERKQFGQPIGAFQLMQGKLADMYVKLQSSRAMLYGCSRAC 380

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K       Y+         +    A  V  EA++ +GG+GY  +  + R  R++   
Sbjct: 381 DNGK-------YSNTDCAALILYTSTCATEVGLEAIQSLGGNGYTHDYPVNRIMRDAKLY 433

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   L K
Sbjct: 434 EIGAGTNEIRRWLIGRELLK 453


>gi|257452502|ref|ZP_05617801.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           3_1_5R]
 gi|317059043|ref|ZP_07923528.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313684719|gb|EFS21554.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R]
          Length = 378

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 77/404 (19%), Positives = 138/404 (34%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L         N    Q   Y   GE          W   +  ++I  G H
Sbjct: 2   AYLISEEAQDLLADVKKFCENEVKEQCKEYDVTGE----------WPKEIYDKAIEQGYH 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S      V +  +    +  A 
Sbjct: 52  ALEVPEEFGGPGLSRVDIAALLEEMAIADAGFATTISASGLGMKPVLISGSQEQKQRVAD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I    +                  LTE   G+D +A  +   K  D  Y L+G K F++
Sbjct: 112 LILEGGF--------------GAFCLTEPGAGSDASAGKTTAVKDGD-SYILNGRKCFIT 156

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  + + A  +   G   +   L +    GL     +NK+G R++ T ++   +  
Sbjct: 157 NGAVASFYCITAMTDKTKGVKGISMFLVEAGTPGLSTGNHENKMGIRTSNTCDVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++    +  + EAI Y + R   G  +I  
Sbjct: 217 IPASALVGKEGEGFAIAMKTLDQARTWMGCIATGIAQRGINEAIAYGKERIQFGKPVIKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D     ++E+A       I K +   +A  V 
Sbjct: 277 QALQFKIADMEIKTETARQMVAHALTKMDLGLPFAKESA-------IAKCYAGDIAMEVA 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + + N
Sbjct: 330 SEAIQVFGGYGYSREYPVEKLIRDAKIFQIFEGTNEIQRIVIAN 373


>gi|126662336|ref|ZP_01733335.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteria bacterium BAL38]
 gi|126625715|gb|EAZ96404.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)
           [Flavobacteria bacterium BAL38]
          Length = 379

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 135/373 (36%), Gaps = 28/373 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++ E        ++     G    + D  +          + A  +  +A+++A   + 
Sbjct: 29  IERDEHSKFPTEQVKMMAELGFMGMMVDPKYGGAGLDSLSYVLA--MEEIAKVDASAAVI 86

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            SV ++ + A             K  S E       P+ K  V     L+E   G+D  +
Sbjct: 87  MSVNNSLVCA----------GLEKYGSEEQKIKYLTPLAKGDVIGAFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +    + D         W  +   +  ++++AQ +   G   +  L+ +    G    
Sbjct: 137 QRTTAIDMGDHYLVNGTKNWITNGGTASTYLVIAQTDASKGHKGINVLIMEKGMPGFEVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSL 332
             + K+G R + T  L F++        +     G    M     L+   + ++   + +
Sbjct: 197 PKEKKMGIRGSDTHTLLFNDVKVPKENRIGEDGFGFAFAM---STLNGGRIGIASQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+     A+ Y++ R   G  + +   +   +AD+ + I  A  L  + A   D  +  +
Sbjct: 254 AQGAYELALKYSQERVAFGKPIFNHQAIAFKLADMHVKITCARLLIHKAATEKDNGEDIA 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A       K +  ++A  V  EA++  GG+GY+ E  + R  R+S    I  G+ 
Sbjct: 314 HSGAMA-------KLYASEIALEVANEAVQIHGGNGYVSEYHVERMMRDSKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   L K
Sbjct: 367 EIQRIVISRGLVK 379


>gi|254473913|ref|ZP_05087307.1| isovaleryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211957023|gb|EEA92229.1| isovaleryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 387

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 70/409 (17%), Positives = 145/409 (35%), Gaps = 37/409 (9%)

Query: 61  LGEY--VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE    L  T +  A+             P     D+    P  + L       G+   
Sbjct: 10  LGEDIDALRETIRRWAQD---------KLAPRAAEIDETNEFP--NDLWTEMGELGVLGM 58

Query: 119 IWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
             D  +        AH +    +   +        + S    + +    TP     + PK
Sbjct: 59  TADPEYGGTGMGYLAHVVAVEEISRASASVGLSYGAHSNLCVNQINRHGTPEQKAKYLPK 118

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++  + +K +D         W  + 
Sbjct: 119 LCSGEH-------------VGSLAMSEPGAGSDVVSMKLRAEKRNDRYVLNGNKMWITNG 165

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +   ++ A+ +   G   +   L +    G    +  +K+G R + T EL F +    
Sbjct: 166 PDASTLVVYAKTDPDAGPRGMTAFLIEKGMKGFSTAQKLDKLGMRGSNTCELVFEDCEVP 225

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L      V  +   +  +  ++S   +  M  ++   + Y   R   G  + +  +
Sbjct: 226 YENVLGEEGKGVNVLMSGLDYERVVLSGGPLGIMAAAMDIVVPYIHERKQFGKSIGEFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  IAD+   + A+ +  + +A + D  ++  +++A           +  + A  +  E
Sbjct: 286 MQGKIADMYTLMNASRSYVYAVAAACDRGETTRKDSAG-------CILYSAENATKLALE 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           A++ +GG+GYI E    R  R++    I  G+     + +   L + T 
Sbjct: 339 AIQSLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETK 387


>gi|195498051|ref|XP_002096360.1| GE25631 [Drosophila yakuba]
 gi|194182461|gb|EDW96072.1| GE25631 [Drosophila yakuba]
          Length = 405

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 142/378 (37%), Gaps = 32/378 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NAAKFDREHLYPE--KQIRQMGELGVMAIAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++      D         W  ++  ++A I+ A    ++    +   +   +  
Sbjct: 154 SDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATK 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G    + ++K+G R ++T +L F +        L     P    KI +  LD+  + ++G
Sbjct: 214 GFSLGKKEDKLGIRGSSTCQLIFEDCVVPKDNMLG---EPGFGFKIAMQTLDAGRIGIAG 270

Query: 328 M-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 331 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 383

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 384 YEGTSEIQRLVIAGSILK 401


>gi|91793296|ref|YP_562947.1| butyryl-CoA dehydrogenase [Shewanella denitrificans OS217]
 gi|91715298|gb|ABE55224.1| Butyryl-CoA dehydrogenase [Shewanella denitrificans OS217]
          Length = 385

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 147/395 (37%), Gaps = 29/395 (7%)

Query: 68  CTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++ A +A    T +L    P   +WD+    P    +++++   G        S   
Sbjct: 7   DDQRQFAELARQFATDELA---PFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGG 61

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +   +                   +++    +  M+    TP + K W+  + +      
Sbjct: 62  MGLSRLDSSIIFEELSKGCTATTAMLTIHNMATWMITTWGTPALRKTWSEGLTTG----- 116

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                    +     LTE   G+D A++ ++  +  +  Y L+G K F+S   +   +++
Sbjct: 117 --------QLLASYCLTEPGAGSDAASLQTKAVRDGEH-YVLNGSKVFISGAGATEMLVV 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
               G  G   +  +      +G+ Y + ++K+G  +  T ++ F N    +   L    
Sbjct: 168 MCRTGEAGAKGISAIAVPADLDGIIYGKAEDKMGWNAQPTRQITFDNVRVPVDHLLGEEG 227

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A
Sbjct: 228 QGFTFAMKGLDGGRINIATCSVGTAQAALERATQYMNERKQFGKPLAAFQALQFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  +    A   D           A     + K +   +  +V   A++  GG G
Sbjct: 288 TELVAARQMVRLAAFKLDNQDPE------ATAYCAMAKRFATDIGFSVCDSALQIHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + RH+R+   + IL G+   M L +   L
Sbjct: 342 YIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|322370176|ref|ZP_08044738.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320550512|gb|EFW92164.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 381

 Score =  279 bits (714), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 150/393 (38%), Gaps = 26/393 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q   R A     +     P     D+ + +P    L+R++    L        +      
Sbjct: 9   QRAIREAVREFGEAE-ITPVAREHDEEKKYPD--DLVRKAAELDLVAPGIPVEYGGAGMD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               +        A    G  +      ++M+       + ++W P+I S E        
Sbjct: 66  TLSSVIVTEELWRADAGIGSAIGSRGFGSNMIRKYGDEWMKEEWLPRIASGE-------- 117

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                 A    ++E   G+++A I +  ++  D         W  +  ++D  +++A+ +
Sbjct: 118 -----SACCSCISEPGHGSNVAGIETVARRDGDEYVIDGNKMWITNGTVADVAVVMAKTD 172

Query: 251 GRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
                    +  +L     +G    ++ NK+G R++   E+   +       ++G+ N  
Sbjct: 173 PEAEPPHRGISAILVPTDVDGFEPTKIDNKLGIRASDLAEIVLDDVRVPTENVIGEENEG 232

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + D      +  A  +V   + ++ E+I YA  R   G  + +   +   +AD+A D
Sbjct: 233 FYQLMDFFASGRVSVASQAVGVAQAAVDESIDYANEREQGGRRIKEYQAIGHKVADMATD 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA +L++R A+  D    +      A   A + K +  + A  V  EA++  GG+GY+
Sbjct: 293 VEAARSLTYRAASHVDSGDDQ-----LATRFASMAKLFASEHAVDVADEAIQVHGGAGYV 347

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  + R+YR++    I  G+       + + L
Sbjct: 348 TDHPVERYYRDARITKIYEGTSEIQKNIISDDL 380


>gi|312383488|gb|EFR28556.1| hypothetical protein AND_03389 [Anopheles darlingi]
          Length = 1028

 Score =  279 bits (714), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 140/426 (32%), Gaps = 46/426 (10%)

Query: 64  YVLSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           + LS   +E+  +          P    +   G      E+      +++++   GL  S
Sbjct: 37  FALSDEQREIVELTKKFVREEIIPVAAHHDRTG------EYP---WEIIKKAWELGLTNS 87

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
                              A  +          +  S    + V +       K +  ++
Sbjct: 88  HIPADIGGTEMSIVTSCLVAEQFAYGCTGIMTAIEASGLGQTPVIIAGNKEQKKKYLGRL 147

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                         +  +     +TE   G+D+  + ++ ++  D         W  +  
Sbjct: 148 L-------------EEPLVAAYCVTEPGAGSDVNGVRTRAERKGDEYILNGQKMWITNGG 194

Query: 239 MSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +++ + +LA+                + +    GL   R +  +G R++ T  + F +  
Sbjct: 195 VANWYFVLARTNPDPKAPASKAFTGFIVERDTPGLTPGRKEQNMGQRASDTRGITFEDVR 254

Query: 296 GFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                  NV  G     KI +          A  +V   +  L EA+ YA  R   G  +
Sbjct: 255 VP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPI 311

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +   +AD+A+ +  A  ++ + A   D+ +  S         A I K +   +A 
Sbjct: 312 AAHQAVSFMLADMAIGVETARLITMKSAYEVDQGRRNS-------YYASIAKCYASDIAN 364

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            + ++A++  GG+G+  E  + +  R++    I  G+     L +   + +      + F
Sbjct: 365 KIASDAVQVFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMIEAAKQARRFF 424

Query: 470 STLEQD 475
                D
Sbjct: 425 GNFSPD 430


>gi|311693158|gb|ADP96031.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 591

 Score =  279 bits (714), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/539 (18%), Positives = 195/539 (36%), Gaps = 59/539 (10%)

Query: 50  FPSVVHKELELLGE---YVLSCTAQELARMA-NYNTPQLHAYGPGGERWD----KVEFHP 101
             +    ELE   +    ++S    E  ++A     P   A    G  +D     V+   
Sbjct: 18  LGADRLHELEKYADATPDLISAVIDEAGKLAAEVIQPTNQAGDREGCTYDPETHSVKTPE 77

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    ++ +  G         +        H ++     ++        M P +T  ++
Sbjct: 78  CFKDAYKKFVQGGWTALDAPLEYGGQGLP--HTLKFVVDEMVCSTNLSLGMYPGLTHGAI 135

Query: 162 VAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL    +  + K +  K+ S E+  T             + LTE + GTD+  I ++  
Sbjct: 136 SALYAHGSEELKKTYLEKLISGEWTGT-------------MCLTEPQCGTDLGLIRTRAT 182

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLED-GSP 267
              DG Y L G K +++    D       ++LA+          +  F+VP+ L + G  
Sbjct: 183 PNDDGSYALEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVVPKFLPESGER 242

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N      L++K+G + +AT  + F    G+L+G+ N     +  M     L   +  +  
Sbjct: 243 NPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGEPNDGMRAMFTMMNEARLMVGMQGLGL 302

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             ++  E++ +AR R  S               +I  P ++R +    +      AL+  
Sbjct: 303 AEMAYQESLGFARERLQSRSLSGPKNPDGPADPIIVHPDVRRMLMRQKVLNEGMRALALF 362

Query: 376 LANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  D + +  +E          +++ P+ K +            ++ +GGSG+  +  
Sbjct: 363 AGHQLDLSVAHPDETVRESADDLVQLLTPVVKSFLTDEGFNNANTGLQVLGGSGFTTDWP 422

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK-VITI 486
           + +  R+     I  G+     +D++   L  KG  L   LF TL   L  + +      
Sbjct: 423 LEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRTLFGTLSGYLKDNPEAPHREE 482

Query: 487 LRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           L++++   +     LA    +    A +AA  Y   M      +L +R  +  +     
Sbjct: 483 LKNAMKALETATMWLASNAPKDPEQAGAAATPYLRLMALTVIGYLWSRMANVANEQLAA 541


>gi|148825004|ref|YP_001289758.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11]
 gi|254233290|ref|ZP_04926616.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C]
 gi|308232573|ref|ZP_07416496.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001]
 gi|308371458|ref|ZP_07425035.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003]
 gi|308372661|ref|ZP_07429402.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004]
 gi|308373826|ref|ZP_07433766.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006]
 gi|308374989|ref|ZP_07442313.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007]
 gi|308378475|ref|ZP_07482702.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009]
 gi|308380814|ref|ZP_07491153.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011]
 gi|124603083|gb|EAY61358.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C]
 gi|148723531|gb|ABR08156.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11]
 gi|308213680|gb|EFO73079.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001]
 gi|308328817|gb|EFP17668.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003]
 gi|308332660|gb|EFP21511.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004]
 gi|308344138|gb|EFP32989.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006]
 gi|308347940|gb|EFP36791.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007]
 gi|308352591|gb|EFP41442.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009]
 gi|308360491|gb|EFP49342.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011]
          Length = 585

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 139/530 (26%), Positives = 227/530 (42%), Gaps = 57/530 (10%)

Query: 33  GMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N Y +D  L  ++A +      +     L  +GE       +  A   + N P+L  Y
Sbjct: 25  GLNWYLTDPTLQFIMAYYLRPDELAFAEPHLTRIGELTGGPVTR-WAEETDRNPPRLERY 83

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G    +V    ++    R  I          R        +      A  YL+ Q +
Sbjct: 84  DRWGHDISRVVLPESFIQSKRAVIEARQAV----RDDAARAGVKPSLALFAADYLLNQAD 139

Query: 148 ---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  L +      S+V     P V +    K+ S E+D                 LTE
Sbjct: 140 IGMACALATGGNMVRSLVTAYAPPDVREFVLGKLNSGEWDGE-----------AAQLLTE 188

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLV 258
           + GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  FLV
Sbjct: 189 RAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVATFLV 247

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGPV 309
            R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                  +
Sbjct: 248 LRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGLTRM 307

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+ AA
Sbjct: 308 MELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDVEAA 367

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+ F    + +  + R      A    P+TK   C++   V ++A+E  GG+GYIE   
Sbjct: 368 LAMVFDGFGAANHRQPRCLPQRIA---VPVTKLKTCRLGITVASDAIEIHGGNGYIETWP 424

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------- 481
           +AR  R++  N+I  G  N + LDV   +E+ T   E L + L   +  S          
Sbjct: 425 VARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARLRDAVSVSDDDDTTRLVS 483

Query: 482 KVITILRDSISL---CKEDKGLARF--LTEKIALASSAAALYRAGMNDIA 526
           + I  L  +I+           AR   L + +    + A L      + A
Sbjct: 484 RRIEDLDAAITAWTKLDRQLAEARLFPLAQFMGDVYAGALLTEQAAWERA 533


>gi|328869223|gb|EGG17601.1| acyl-Coenzyme A dehydrogenase [Dictyostelium fasciculatum]
          Length = 426

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 132/361 (36%), Gaps = 31/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL 164
           LL+     GL        +          I               ++   +    + +  
Sbjct: 86  LLKDLFAQGLMGIEIGEQYGGTALNFMSSIIVIEELAKIDPGVSVIVDVQNTLVNNCINR 145

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T +  + +  K+ +                     L+E   G+D  A+ ++ +   D 
Sbjct: 146 YGTEKQKETYLTKLAA--------------DSVGSFCLSEAGSGSDAFALKTRAEAKGDY 191

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  ++  +  FI++A V+  VG   +   L D    G+   + ++K+G RS+
Sbjct: 192 FVLNGTKMWITNAQEAGVFIVMANVDPSVGYKGITAFLVDRDTPGVSIGKKEDKLGIRSS 251

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHY 338
           +T E+   +         N+     +  K+ I  L+   + ++   + LA+      + Y
Sbjct: 252 STCEVVLQDVKVP---KENILGHLGKGYKLAIEGLNEGRIGIAAQMIGLAQGAFDSTMPY 308

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G  L D   M+   AD+A+DI A   L++  A   +       +A+ A     
Sbjct: 309 IMQRTQFGKPLADFQGMQFTYADLAVDIEAGKLLTYNAARMQEAGLPFVHQASMA----- 363

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K  C ++A  V +  +  +GG G+ +E    R++R+     I  G+ N  +  +   +
Sbjct: 364 --KLHCSRVAEKVASACISMMGGVGFTKEFDAERYFRDCKVGQIYEGTTNIQLQTIARAI 421

Query: 459 E 459
           +
Sbjct: 422 Q 422


>gi|11498891|ref|NP_070122.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304]
 gi|2649289|gb|AAB89955.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304]
          Length = 384

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 145/375 (38%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G+ +D+   +P    + R++   G   +     +         +   +     A    
Sbjct: 28  PYGKEYDEKREYPM--EIFRKAAKLGYVGASVPEEYGGAGLDYLGEAIISEELTRADSSI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  ++    MV    +    + + P             P+ +      + +TE   G
Sbjct: 86  GTAVDLAILGVPMVLRYGSEEQKEKYIP-------------PVVQGKAPSAIAITEPDCG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           TD+AA+ ++  K  +         +  +  ++   I+LA+  E       +   + + + 
Sbjct: 133 TDVAAMRTKAVKEGEEWVINGSKTFITNGSVAGHTIVLAKTAEVEPPHRGISAFIVEPAW 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G   +R++ K+G   + T E+   N       LLG+ N     + +      +  A + 
Sbjct: 193 EGYEARRIE-KMGLNCHDTAEITLKNVRVPAENLLGEENRGFYQLMEFFNESRVKIAALH 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +   A+ YA++R   G  LI+   ++  +AD+  DI AA  L ++ A   D+ K
Sbjct: 252 LGMAVGAYERALEYAKQRKAFGKALIEHQAIQFKLADMWKDIEAARLLVYKAAWLIDQGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      ++   K +  + A  V  EA++  GG GY +E  I R+YR++   +I  
Sbjct: 312 P-------VPAISSAAKLFASEAAVKVTYEALQVFGGYGYSKEYDIERYYRDARVGTIYE 364

Query: 445 GSGNAMVLDVLNLLE 459
           G+  A  + +   L 
Sbjct: 365 GTSEAQRIVIARSLM 379


>gi|66814650|ref|XP_641504.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium
           discoideum AX4]
 gi|60469536|gb|EAL67527.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium
           discoideum AX4]
          Length = 415

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 135/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     DK    P  + + ++    GL        +  + +   AH I    L   +   
Sbjct: 59  PIAADVDKNNLFP--NEMWKKMGDLGLLGITAPSKYGGLDLGYTAHCIAMEELSRASASV 116

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S ++                L ++E   
Sbjct: 117 ALSYGAHSNLCINQITRNANEAQKDKYLPKLISGDF-------------VGALAMSEPNA 163

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ +  +K   G        W  + P ++  ++ A+ +   G   +   L +   
Sbjct: 164 GSDVVSMKTNAKKTEGGWLLNGNKMWITNGPDANVLVVYAKTDINAGSKGITAFLIEKEM 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R + T EL F + F      L    G V+ +        L  +   
Sbjct: 224 KGFSTGQKLDKLGMRGSNTCELVFEDCFVPDENVLGTVGGGVKVLMSGLDYERLVLSAGP 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y  +R   G  + +  +M+  +AD+   + A+ +  + +A S D   
Sbjct: 284 LGIMQACMDNVVPYLHQREQFGKPIGEFQLMQGKVADMYTLLNASRSYVYSVAKSADAGY 343

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++             +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 344 TSRKD-------CAAVILYTAENATQMALQAIQTLGGNGYINEFPTGRLLRDAKLYEIGA 396

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 397 GTSEIRRMLIGREL 410


>gi|83648022|ref|YP_436457.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636065|gb|ABC32032.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 596

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 82/488 (16%), Positives = 168/488 (34%), Gaps = 60/488 (12%)

Query: 41  SLLVALIANFPSVVHKELELLGEY------VLSCTAQELARMANYNTPQLHAY-GPGGER 93
             +  L+          L L G              +E A++A+     L+      G +
Sbjct: 9   RDMQFLLKEVFEADKLWLSLPGARDTVDPDTADAILEEAAKIASSLLAPLNRSGDEEGCQ 68

Query: 94  WDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           W++  V     +       I  G      +  F  +   +    +   +   A +  G  
Sbjct: 69  WNEGVVTTPKGFKEAYNTFIEGGWCGLGGNPDFGGMGMPKMLGAQVEEMVQSANISFGLY 128

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +  +   +    +  + + + P ++S  +             A  + LTE   GTD+
Sbjct: 129 PMLTAGACLAIDAHASEELKQTYLPNLYSGVW-------------AGSMCLTEPHSGTDL 175

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPR 260
             I ++ +   DG Y ++G K F++    D       ++LA++         +  FL P+
Sbjct: 176 GIIRTKAEPNGDGSYAITGTKIFITGGEHDLSENIIHLVLAKLPDAPAGSRGISLFLAPK 235

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
                    G  N +    +++K+G +++AT  + F    G+L+G+ N     +  M   
Sbjct: 236 FKVTEEGGVGERNPVFCGSIEHKMGIKASATCVMNFDGAQGWLVGEPNKGLACMFTMMNY 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADI 362
             L   +  ++    S   A+ YA+ R   G               +I  P ++R +  +
Sbjct: 296 ERLGVGVQGLAAAERSYQNAVEYAKDRIQ-GRSATGVVAKDKAADPIIVHPDVRRMLMTM 354

Query: 363 ALDIAAATALSFRLANSF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              I  + A S  +A         D+A ++    A   ++ P+ K +             
Sbjct: 355 RALIEGSRAFSTYVAKYLDISKYSDDATAKQHAEAMVALLTPVAKAFLTDRGLDSTVLGQ 414

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
           +  GG GYI E    +  R+     I  G+     LD++   +   G    E     +  
Sbjct: 415 QVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVAMNGGKFVELYAGEVAD 474

Query: 475 DLGSSGKK 482
            + ++  +
Sbjct: 475 FIEANRDR 482


>gi|207727916|ref|YP_002256310.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206591158|emb|CAQ56770.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 595

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/498 (18%), Positives = 184/498 (36%), Gaps = 73/498 (14%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-A 102
           +   P+    +++ +     +   +E  +  +     L+      G  +  D V   P  
Sbjct: 25  LKEMPAHAEIDVDTI-----NQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPTG 79

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    ++ +  G      D  +          I  A   ++        M P ++  +  
Sbjct: 80  FKDAYKQYVDGGWPALGCDPEYGGQGLPI--LINNAVYEMLNSANQAWTMYPGLSHGAYE 137

Query: 163 ALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           AL    T  + + + PK+ S  +  T             + LTE   GTD+  + ++ + 
Sbjct: 138 ALHAHGTDELKQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTRAEP 184

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED----- 264
           ++DG Y ++G K F+S+   D       ++LA++         +  F+VP+ + D     
Sbjct: 185 LADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGTKGISLFVVPKFIPDAGGKP 244

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  NG+    +++K+G   NAT  +      G+++G+ N     +  M     L   +  
Sbjct: 245 GERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQG 304

Query: 325 VSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATAL 372
           +    V+   +  YA+ R                  +I  P ++R +           A 
Sbjct: 305 LGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAF 364

Query: 373 SFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           ++ +A   D      +  +R E A    ++ P+ K +    A     E M+  GG GYI 
Sbjct: 365 AYWIALQIDRELSHPDESARKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIA 424

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E  + ++ R++  N I  G+     LD+L     G             D+G+  KK   I
Sbjct: 425 EWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILG-------------DMGARMKKFGKI 471

Query: 487 LRDSISLCKEDKGLARFL 504
           ++D +      + +  F+
Sbjct: 472 VQDFVEAEGTSEAMQEFI 489


>gi|325283664|ref|YP_004256205.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315473|gb|ADY26588.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 385

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 130/374 (34%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P    +D+    P     LR     GL  +     +         + +  A +       
Sbjct: 29  PLAREYDREHRWPE--PQLRGLAELGLLGATVPEQWGGAGLDSVTYALCLAEIAAADPSV 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +   +     M+    T    + +   + S E                   LTE + 
Sbjct: 87  AVIVSVQNGLPEQMILNYGTDEQRERFLRPLASGE-------------KLGAFCLTEPQA 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A++ ++  +  D         W  S   +D ++++A+  G  G   V   + +   
Sbjct: 134 GSDAASLKTRAVRDGDDWLISGSKAWITSGGHADLYMVMARTGGE-GARGVSCFVVEAGT 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMS 324
            GL + R + K+G  +  T  + F          +      +           +   ++ 
Sbjct: 193 PGLSFGRPEEKMGQHAAHTTAVTFEGVRVPASAMIGEEGQGLIVALSSLDAGRIGIGMLG 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  YA  R   G  +     +   +A +A  + AA  +  + A   D+ +
Sbjct: 253 VGIAQAALEHAARYAAEREQFGKPIAAHQAVSFKLARMATQLEAARLVGLKAAWLKDQGQ 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S+EA+ A+++         + A  V  +A++  GG+GY  E  + + YR++    I  
Sbjct: 313 PFSKEASMAKLL-------GSEAAVDVTRDAVQIFGGNGYSAEYPVEKLYRDAKITEIYE 365

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   +
Sbjct: 366 GTSEIQQLVIGRAV 379


>gi|83312685|ref|YP_422949.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947526|dbj|BAE52390.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 399

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 141/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     LR++   G                +            A    
Sbjct: 47  PHAAHWDEEGIFPE--DTLRKAAELGFAGIYVGEDVGGSALSRLDAALIFEELAAACPST 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+         + + P + S                     LTE   G
Sbjct: 105 AAYISIHNMAAWMIDSFGDQEQRRRFLPDLCSM-------------RKFASYCLTEPNAG 151

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++ ++  D  Y L+G K F+S    SD ++++ +  G  G   +  L+ +   
Sbjct: 152 SDAASLRTKAERDGDH-YVLNGTKAFISGGGRSDVYVVMVRT-GAPGPKGISCLVVEAGT 209

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G ++  T  + F +    +   +     G    MK L    ++    S
Sbjct: 210 PGLSFGKQEKKLGWKTQPTASVIFEDCRVPVANRIGAEGDGFKIAMKGLDGGRINIGACS 269

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G R  L  AI Y  +R   G  +      +  +AD+A ++ AA  +  R A+S D   
Sbjct: 270 LGGARACLEHAIEYTGQRQQFGQAISAFQATQFKLADMATELEAARLMIHRAAHSLDSKS 329

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +      A +   + K     +  AV   A++  GG GYI+E  I R++R+   + IL 
Sbjct: 330 PQ------ATVHCAMAKRMATDVGFAVTDAALQLHGGYGYIKEYPIERYFRDLRVHQILE 383

Query: 445 GSGNAMVLDVLNLL 458
           GS   M + +   L
Sbjct: 384 GSNEIMRVIIGRAL 397


>gi|320324609|gb|EFW80686.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320328982|gb|EFW84981.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330880722|gb|EGH14871.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 387

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
            DK    P    + R+    G+        +        AH +    +   +   A    
Sbjct: 36  IDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASVALSYG 93

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + S    + +    +P     + PK+ S E+                L ++E   G+D+ 
Sbjct: 94  AHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNAGSDVV 140

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           ++  +  K  D         W  + P ++ +++ A+ +       +   + +    G   
Sbjct: 141 SMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVERDWKGFSR 200

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMR 329
               +K+G R + T EL F +        L    G V  +   +  +  ++S      M+
Sbjct: 201 GSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRVLMSGLDYERVVLSGGPTGIMQ 260

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  ++  ++
Sbjct: 261 ACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGETTRKD 320

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 321 AAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEI 373

Query: 450 MVLDVLNLLEKGTN 463
             + +   L   T 
Sbjct: 374 RRMLIGRELFNETR 387


>gi|257455371|ref|ZP_05620606.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60]
 gi|257447333|gb|EEV22341.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60]
          Length = 386

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 148/405 (36%), Gaps = 29/405 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   Q  A +A        +  P    WD   + P    + + +   G      +  F 
Sbjct: 5   LTEDQQAFADLAAQFAA--KSLAPNAAEWDATGYFP--KEVFKAAGELGFMGLYTNPDFG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +   +                    M+     A M+     P V + + P++ + E   
Sbjct: 61  GLGLPRLDAAIIFEKLAYGDTSTAAFMTIHNMVAWMIGEFAKPEVAEKYLPELLAGE--- 117

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
                           LTE   G+D  ++ ++  K  D  Y ++G K F+S   + D  +
Sbjct: 118 ----------KLGSYCLTEPNAGSDAGSLKTKAVKQGD-YYHITGQKMFISGAGATDVLV 166

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++A+     G   V   + D + +G+ Y + ++K+G ++  T  + F++        L  
Sbjct: 167 VMARTSDN-GAKGVSAFIVDANSDGISYGKNEHKMGWKNQPTAAVHFTDVKVPAENLLGE 225

Query: 305 -STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    MK L    ++ A  +V   + +L  A+ Y + R   G  L     ++  +AD
Sbjct: 226 EGQGFTFAMKGLDGGRINIATCAVGTAQAALDRAVQYVQERSQFGKTLDQFQNVQFKLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + +A  +    A   D           A     + K     ++  +  +A++  GG
Sbjct: 286 MLTHLVSARQMVRLAAYHLDSKSPD------ATAYCAMAKRLATDLSFDIANQALQLHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            GY++E  + RH R+   + IL G+   M + V   + +   L  
Sbjct: 340 YGYLQEYPLERHVRDLRVHQILEGTNEVMRMIVSRKMMEDGALAR 384


>gi|330809083|ref|YP_004353545.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377191|gb|AEA68541.1| putative oxidoreductase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 590

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/588 (17%), Positives = 193/588 (32%), Gaps = 86/588 (14%)

Query: 22  LFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR-MANYN 80
               N P      N ++    L   +                       +E A+   N  
Sbjct: 16  HEVFNAP------NLWARLPALANTVD--------------AATADAILEEAAKVTHNLI 55

Query: 81  TPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            P   +    G +W   +V     + A     I  G      + ++  +   +   ++  
Sbjct: 56  FPLNRSGDEEGAQWHDGQVSTPGGFKAAYSTYIDGGWVGLSGNPAYGGMGMPKMLAVQFE 115

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +   A        + S  +   +    +  +   + P             PM +   A 
Sbjct: 116 EMLYAANSSFALYSALSSGACLAIDAHASEALKALYLP-------------PMYEGRWAG 162

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG-- 251
            + LTE   GTD+  I ++ +  +DG Y ++G K F++    D       ++LA++    
Sbjct: 163 SMCLTEAHAGTDLGIIRTRAEPQADGSYQITGSKIFITGGEQDLTENIIHLVLAKLPDAP 222

Query: 252 ----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                +  FLVP++  D     G  N +    +++K+G +++AT  + F    G+L+G+ 
Sbjct: 223 AGPKGISLFLVPKIHVDAQGMLGESNAVSCGSIEHKMGIKASATCVMNFDGASGWLIGEA 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILI 350
           N     +  M     L   I  +     S   A  YA+ R  S               +I
Sbjct: 283 NKGLAAMFTMMNYERLSIGIQGIGCAEASYQNARRYAQERIQSRSPAGAQAKDKIADPII 342

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404
             P ++R +  +        A +  +    D AK       R +  A   ++ P+ K + 
Sbjct: 343 VHPDVRRMLLSMKAMTEGGRAFACYVGQQLDLAKFCEHSQERHDAEALVALLTPVAKAFF 402

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-TN 463
                       +  GG GYI E    +  R+     I  G+     LD+L     G   
Sbjct: 403 TDTGLDSCIHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLLGRKVVGNGG 462

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYR 519
           +  +LF+T  +D             + +   +  + L+ +L ++ +L      SA   Y 
Sbjct: 463 VALRLFTTQIRDFAYLPGAAYAA--ELLDAVQRLENLSDWLQQQASLDPHAIGSACVEYL 520

Query: 520 AGMNDIADVFLENRFLDNCHSTHCMLH---------GRFNAAHIIDSL 558
                +A  ++  R        H              RF  + ++  +
Sbjct: 521 HLFGYVAYAYMWARMAQTAEHQHATDPVFYGAKLGTARFYFSRLLPRI 568


>gi|254719954|ref|ZP_05181765.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265984964|ref|ZP_06097699.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|306838543|ref|ZP_07471381.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264663556|gb|EEZ33817.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|306406410|gb|EFM62651.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 384

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTATDVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|198429737|ref|XP_002129400.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Ciona intestinalis]
          Length = 421

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 131/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
             +R+    GL        +            A          AG +MS   +     + 
Sbjct: 78  EQVRKMGDLGLMAIDQKEEYGGAGLDSLAYAVAMEEISRGCATAGVIMSAHNSLYLGPIK 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + +  + +               P           L+E   G+D  A ++  +   D
Sbjct: 138 YWGSEQQLQKYV-------------LPFSTGEKVGCFALSEPGNGSDAGAASTTARDDGD 184

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +S  + A ++ A  +       +   +      GL   + ++K+G R 
Sbjct: 185 CWVLNGTKSWITNSYEASAAVVFATTDKSKKHKGISAFIVPMPTEGLSLGKKEDKLGIRG 244

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T  L F +     +   N+        KI +  LD+  + ++   + +A+     AI 
Sbjct: 245 SSTANLIFDDCK---IPKENLVGESGFGFKIAMSTLDAGRIGIASQALGIAQASLDCAIA 301

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +     ++  ++D+AL I +A  L++R A   D   + ++EAA A++ A
Sbjct: 302 YADDRKAFGAPISKLQSIQFKLSDMALKIESARLLTWRAAKLKDAGMNFTKEAAMAKLAA 361

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             T  +          +A++ +GG G++ +    RHYR++    I  G+     L +   
Sbjct: 362 SETATFAS-------HQAIQILGGMGFVSDMPAERHYRDARITEIYEGTSEIQRLVIAGR 414

Query: 458 L 458
           L
Sbjct: 415 L 415


>gi|170051566|ref|XP_001861821.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167872758|gb|EDS36141.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 404

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 141/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   +PA    +++    GL        +            A          A
Sbjct: 47  PIAAKIDREHLYPA--EQIQKMGELGLMAVAVSEKYGGTGLDYVAYAIAMEEISRGCASA 104

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     V    +    + +                           L+E   
Sbjct: 105 GVIMSVNNSLYLGPVERYGSEAQKEQFVAGFTDG-------------KRVGCFALSEPGN 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++      D         W  ++  +++ ++ A  +  +    +   +   + 
Sbjct: 152 GSDAGAASTVAALKGDRWVLNGNKCWITNAYEAESAVVFATTDKSMKHKGISAFIVPRNA 211

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    + ++K+G R ++T +L F +     +   N+   P    KI +  LD+  + ++
Sbjct: 212 PGFSLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGMGFKIAMQTLDAGRIGIA 268

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     ++  IAD++L + +A  L++R A   D
Sbjct: 269 SQALGIAQASLECAVDYANKRIAFGKPISKLQSIQSKIADMSLGLESARLLTWRAAWLKD 328

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                ++EAA A++ A  +  +C         + ++ +GG GY+ +    RHYR++    
Sbjct: 329 NKHPFTKEAAQAKLAASESATFC-------AHQCIQILGGMGYVSDMPAERHYRDARITE 381

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 382 IYEGTSEIQRLVIAGQVIK 400


>gi|238923142|ref|YP_002936655.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656]
 gi|238874814|gb|ACR74521.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656]
          Length = 389

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 132/382 (34%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    + +    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEVFPA--ETVAKMGKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCIDPIMTFGTEEQKKKYVPDLASG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGCQTKAVLDGDE-WVLNGSKCFITNGKVADVYIIIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + D    G  +   + K+G R ++T EL F +       LLG                 +
Sbjct: 190 IVDKGTPGFSFGTKEKKMGIRGSSTYELIFEDARIPKNALLGKEGRGFPIAMHTLDGGRI 249

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L   I Y + R   G  +  Q   +  +AD+A  I AA  L +  A 
Sbjct: 250 GIAAQALGIAEGALERTIEYTKERKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAM 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              E     + +    + A   K +  + A AV  E ++  GG GYI E  + R  R++ 
Sbjct: 310 KKAEFAKNPKVS--YSVDAAKAKLFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAK 367

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     + +   L +
Sbjct: 368 ITEIYEGTSEVQRMVISGSLLR 389


>gi|116748810|ref|YP_845497.1| butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
 gi|116697874|gb|ABK17062.1| Butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB]
          Length = 389

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 137/378 (36%), Gaps = 24/378 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E  P    +++      L        +  +         A      A +      + 
Sbjct: 32  DEQEEFP--WEIMKICAQADLFGLYIPEEYGGLGGGILENCLAIEKIAEACIGIATSFAA 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S   A  + L  +  + + + P I S                    GLTE   G+D++ I
Sbjct: 90  SGLGAYPILLFGSEALKRAYLPDIASG-------------KRLAAFGLTESGAGSDVSGI 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +   +  D        +W  +   ++ + +LA  +   G       + +    G  + +
Sbjct: 137 QTTAVRDGDHYVLNGAKQWITNGGEAEIYSVLAITDRSKGPRGASFFVVEKDDPGFSFGK 196

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            + K+G R++AT EL F +        +    TG +  MK           + V   + +
Sbjct: 197 KEKKLGIRASATRELVFQDCRIPKERLIGREGTGFIVAMKTFDKSRPGIGALGVGLSQGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  ++ YAR+R   G  +I    ++  +AD+A+   AA AL +  A   D     S    
Sbjct: 257 LDISVEYARKRMQFGKPIISFQAIQHKLADMAIKTEAARALIYAAARYMDTDPPDS---- 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               +A + K +    A     EA++ +GG GY+++  + +  R++    I  G+     
Sbjct: 313 --SKVAAMCKVFAGDAALYAATEAVQILGGYGYMQDYPVEKMMRDAKILQIYEGTNEIQR 370

Query: 452 LDVLNLLEKGTNLFEQLF 469
             +   L K  +  ++ F
Sbjct: 371 NIIGQELNKEYSRLKESF 388


>gi|56459977|ref|YP_155258.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
 gi|56178987|gb|AAV81709.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
          Length = 385

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 134/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+  + P    + R++   G                +                 
Sbjct: 26  PNAAKWDEEHYFPV--EVFRKAGEMGFMGMYTPEEAGGFGMSRLDSALIFEQLAGGCTAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M+       M+       V   W  ++ + E                   LTE   G
Sbjct: 84  TAMMTIHNMVTWMIGSFGQQSVIDQWVSELVTGE-------------KLGSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    +D  +++A+  G  G   +         
Sbjct: 131 SDAASLRTSAKKDGDE-YVLNGSKMFISGAGETDVLVVMART-GEDGPKGISAFAVPADA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G+ Y + ++K+G  +  T  + F +        L     G    M  L    ++ A+ S
Sbjct: 189 KGVIYGKAEDKMGWNAQPTRLVTFEDVRIPAENLLGKEGEGFKFAMMGLDGGRINIAVCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y + R   G  L     ++  +AD+A ++ AA  +    A+  D   
Sbjct: 249 VGTAQAALNTAKAYMQERTQFGKPLAAFQALQFKLADMATELVAARQMVRLAASKVDNND 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +             + K +   +   V  +A++  GG GYI+E  + RH R+   + IL 
Sbjct: 309 ADK------TTYCAMAKQFATDVGFKVCNDALQLHGGYGYIKEYPLERHVRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   +
Sbjct: 363 GTNEVMRMIIGRRI 376


>gi|54294711|ref|YP_127126.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens]
 gi|53754543|emb|CAH16027.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens]
          Length = 389

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  + L R+    GL        +    +   AH I    +   +   
Sbjct: 33  PLAAQIDEQNTFP--NHLWRKLGEMGLLGITVSEEYGGANMGYLAHTIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L       + + PK+ S EY                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIFLNGNNEQKQKYLPKLISGEY-------------IGALAMSESNS 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q +   D         W  + P +D  ++ A+ + + G   +   + +   
Sbjct: 138 GSDVVSMQLQARSAGDKYILDGTKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         +LG +N     +           A   
Sbjct: 198 PGFKTAQKLDKLGMRGSNTCELVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTILAAGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R      + +   ++  +AD+  D+ A  A  + +A + D  +
Sbjct: 258 VGIMQACMDVVLPYVHERKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  ++++ +GG+GYI E    R  R++    I  
Sbjct: 318 VSRKDAAG-------VILYTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T 
Sbjct: 371 GTSEIRRMLIGRELFKETA 389


>gi|307610525|emb|CBX00111.1| hypothetical protein LPW_18561 [Legionella pneumophila 130b]
          Length = 372

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  + L R+    GL        +    +   AH I    +   +   
Sbjct: 16  PLAAQIDEKNTFP--NHLWRKLGEMGLLGITVSEEYGGANMGYLAHTIAMEEISRASASV 73

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L       + + PK+ S EY                L ++E   
Sbjct: 74  GLSYGAHSNLCVNQIFLNGNNEQKQKYLPKLISGEY-------------IGALAMSESNS 120

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q +   D         W  + P +D  ++ A+ + + G   +   + +   
Sbjct: 121 GSDVVSMQLQARSAGDKYILDGTKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGM 180

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         +LG +N     +           A   
Sbjct: 181 PGFKTAQKLDKLGMRGSNTCELVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTILAAGP 240

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R      + +   ++  +AD+  D+ A  A  + +A + D  +
Sbjct: 241 VGIMQACMDVVLPYVHERKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGR 300

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  ++++ +GG+GYI E    R  R++    I  
Sbjct: 301 VSRKDAAG-------VILYTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGA 353

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T 
Sbjct: 354 GTSEIRRMLIGRELFKETA 372


>gi|70731295|ref|YP_261036.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68345594|gb|AAY93200.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 387

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDVDNLFPA--DMWRKFGDMGLLGITVAEEYGGAGLGYLAHVVAMEEVSRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGNHEQKSKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDHFVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V+ +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +A + +  +
Sbjct: 256 TGIMQACMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACERGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|145548916|ref|XP_001460138.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427966|emb|CAK92741.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 157/409 (38%), Gaps = 41/409 (10%)

Query: 58  LELLGEYVLSCTAQELARMANYNTP--QLHAY---------GPGGERWDKVEFHPAWHAL 106
           L+ LG+   S +      +AN      +L ++          P  ++ D+    P    L
Sbjct: 2   LQKLGKLRASFSLLNFNFIANLPPEVEELRSHVAKFANEEVAPLADKADEEGKFP--PHL 59

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-- 164
            R+    GL  +  + ++       ++      L  +++   G  +S S  SA +VA   
Sbjct: 60  WRKMGDLGLLGATVNPAYGGSGL--SYSAHCMILEEISRASGGIGLSYSAHSALIVAQLE 117

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K + PK+ S E+                L ++E   G+D+ ++ S  +K+ D
Sbjct: 118 RHGNEFQKKKYLPKLCSGEW-------------VGSLAMSEPNAGSDVVSMKSTAKKVGD 164

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P+SD  I+ A+ E       +   + + +  G    +  +KIG + 
Sbjct: 165 KYILNGSKMWITNGPISDILIVYAKTEPEKKQHGITAFIVEANMKGFSKGKKLDKIGMKC 224

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  + F N       +LG++N     +        L  A   V  M+ +   +  Y  
Sbjct: 225 SDTGPIYFDNVEIPAENVLGEVNQGVYVLMSGLDYERLVLAAGPVGLMQAAFDISRDYCN 284

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +M++ +A++   + A+ A+ + +A + D+    + +           
Sbjct: 285 TREQFGKKIGQFQMMQQKLAEMYTTLQASRAMLYSVARAVDQGNITNTD-------CAAL 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            Y+    A  V  EA++C+GG+GY +E  + R   +S    I  G+   
Sbjct: 338 IYYTSANATQVGLEAIQCLGGNGYTKEYPVGRIMLDSKLYEIAAGTNEI 386


>gi|6449060|gb|AAF08800.1|AF184956_7 YngJ [Bacillus subtilis subsp. spizizenii ATCC 6633]
          Length = 380

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 135/380 (35%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    P      ++    GL    +   +        ++ +    +       
Sbjct: 26  PHAEHVDQTGEFPI--QTFKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEIGKAGGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    +     + S                    GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEEQKRAHLTPLASG-------------KALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 131 GSDAGGTQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 TPGLTITSPYDKMGVRGSNTAEILLEDVRVPAC---NLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+A     + YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAAYA       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DHNRPFTKEAAYA-------KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 361 EIGEGTSEIQRIVIARQLLK 380


>gi|237802424|ref|ZP_04590885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025281|gb|EGI05337.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 592

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 93/493 (18%), Positives = 177/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPA-WHALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA +    R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWNDTVVTTPAGYPQAYRTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      + +F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGNPAFGGMGMPKVVSAQVEEMINSASLAFGLYAMLTSGACVSIDTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGAW-------------AGSMCLTEAHAGTDLGMIRTRAEPQADGTYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       GS N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSVGSRNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKEKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   +E A         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSPDEVARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N   ++     + Q + SS   +   +R   S  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQVFSDEVRQFIDSSESSLGEFVRPLTSAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTAWVLDR 507


>gi|187479839|ref|YP_787864.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424426|emb|CAJ50979.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 392

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 144/400 (36%), Gaps = 22/400 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A  +   L    P     D+ +  P    L R+    G+        +   
Sbjct: 11  GEDLDMLRDAVRSFA-LSEIAPRAGEIDRDDQFPM--DLWRKFGDLGVLGMTVSEEYGGT 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    L   +   A    + S    + +    +      + PK+ S E+   
Sbjct: 68  NMGYLAHMLVMEELSRASASVALSYGAHSNLCVNQIYRNGSEAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +K  D         W  + P +D  ++ 
Sbjct: 125 ----------IGALAMSEPGAGSDVVSMRLRAEKKGDRYVLNGTKMWITNGPDADTLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPEAHQRGITAFLIEKGFKGFSIAQKLDKLGMRGSHTGELVFQDCEVPAENILGQLN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A++S   +  M+  +  A+ Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVKVLMSGLDYERAVLSGGPLGIMQAVMDVAVPYVHDRKQFGQAIGEFQLIQGKMADMY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +  + D  +   E     R        +  + A  +  E ++ +GG+G
Sbjct: 295 TTLQASRAFCYTVGKNLD--RLGREHVRQVRKDCAALILYTAERATWMAGEGIQLLGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R +R++    I  G+     + +   L   T 
Sbjct: 353 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETA 392


>gi|160875501|ref|YP_001554817.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160861023|gb|ABX49557.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315267688|gb|ADT94541.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 585

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/489 (20%), Positives = 184/489 (37%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKAVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEALKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRNIRTRALPQDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +        NG+    +++K+G + +AT  + F N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNADGSLANANGVSVGSIEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFIA 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|15613693|ref|NP_241996.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10173746|dbj|BAB04849.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 381

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 137/378 (36%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +DK    P    + ++    GL    +   +            A      A    
Sbjct: 26  PNAIHYDKTAQFPE--DVFKKMGELGLLGIPFPEEYGGSGGDTISYALAVEEVGRACGGT 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   + +V+  AS +    T R  ++    + + E                  GLTE   
Sbjct: 84  GLSYAAAVSLGASPIYYFGTERQKQEHLVPLATGE-------------SLGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A   +   G  ++  L+    
Sbjct: 131 GSDAGGTRTKAVLEGDEYVINGEKCWITNAGYARTVIVTAVTGKDERGKPVISALIVPTG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G       +K+G R++ T EL   +         N+   P +  K  +Y LD   +S+
Sbjct: 191 IEGFTISCNYDKMGVRASNTCELVLEDVRVP---KENLLGDPTKGFKQFLYTLDGGRISI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + V +A+A     + YA  R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 GALAVGIAQAAFDRALAYANERKQFGQKISSFQAIQFKLADMAMEIELARNMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K  ++E AYA       K +  + A     +A++  GG GY++E  + R  R++   
Sbjct: 308 DQKKPFTKEGAYA-------KLYASETAMRTANQAIQIHGGYGYMQEYEVERMLRDAKLL 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 361 EIGEGTSEIQRMVIARQL 378


>gi|218184438|gb|EEC66865.1| hypothetical protein OsI_33363 [Oryza sativa Indica Group]
          Length = 513

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 137/374 (36%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+       ++    +   AH +    +   +   
Sbjct: 152 PRAGEIDRDDQFPM--DLWRKMGELGVLGITVSEAYGGAQMGYLAHMVAMEEISRASASV 209

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 210 GLSYGAHSNLCVNQIHRNGSEEQKRKYLPKLVSGEH-------------VGALAMSEPGA 256

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +             W  + P +D  ++ A+ E  +G   V   L +   
Sbjct: 257 GSDVISMKLRAEDKGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGM 316

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F N        L    G  + +   +  + A+++   
Sbjct: 317 KGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVNGGAKVLMSGLDYERAVLTGGP 376

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  +AD+   + A  + ++ +A + D   
Sbjct: 377 LGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDM-- 434

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +E     R        WC + A  +  E ++  GG+GYI E  + R +R++    I  
Sbjct: 435 LGTEHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYPLGRLWRDAKLYEIGA 494

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 495 GTSEIRRMLIGREL 508


>gi|116329092|ref|YP_798812.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330298|ref|YP_800016.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121836|gb|ABJ79879.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123987|gb|ABJ75258.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 387

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 124/374 (33%), Gaps = 25/374 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           WD+   HP    L+ R   + G++       +         +           L      
Sbjct: 32  WDEENKHPE--ELINRMRKELGVNGLTIPEEYGGWGLGSVEQCLVTEELSRGCLGISLCF 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +      +    +    K W   +   EY              I   L+E   G+D+ 
Sbjct: 90  GYTGLGILPILKGASHEQKKKWLQPVIDGEY-------------GISFCLSEPGAGSDVP 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +++   K  D        +W      + A+ + A  +   G   V          GL  
Sbjct: 137 GMSTTAVKKGDKWVINGTKQWITGGGSAGAYTVFAYTDKGRGTRGVSCFYVKRDTPGLTV 196

Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + ++K+G R++ T ++ F +       ++G  N+                A M V   +
Sbjct: 197 GKKEDKLGIRASDTRQIIFEDCAVEEANMIGRENLGFIYALQTLNASRPYVAAMGVGVSQ 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  YAR+R   G  +     ++  +AD+++ +  +  +++  A   D    R   
Sbjct: 257 AALDYASKYARQREQFGSKISSFQAVQHMLADMSIGLETSRQVTYLAARMADADDPR--- 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  + I K    + A     +A++  GG GY +E  + +  R++    I  G+   
Sbjct: 314 ---LPKYSAIAKAHASETAMKCALDAVQIFGGYGYTKEYPVEKLMRDAKILCIFEGTTQI 370

Query: 450 MVLDVLNLLEKGTN 463
              ++   + +   
Sbjct: 371 QKNEIAAYVIREAA 384


>gi|256380353|ref|YP_003104013.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924656|gb|ACU40167.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 387

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 132/406 (32%), Gaps = 28/406 (6%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
            G Y L+     L R A  +  +     P     D+ E  P     L   +  G      
Sbjct: 5   FGTYQLAEEHDAL-REAIRSLAE-KEIAPHAADVDERERFPV--EALSALVKAGFSAVHV 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              ++                      +  + + +      + L  +  + +   P I +
Sbjct: 61  PEDYDGQGADSVATCIVIEEVARVCASSSLIPAVNKLGTMPIILAGSEELKRQVLPSIAA 120

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                   L+E+  G+D A++ ++ +   D         W  ++  S
Sbjct: 121 GE-------------AMASYALSEREAGSDTASMRARARLEGDRWVLNGTKCWITNAGES 167

Query: 241 DAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
             + ++A  +         +   +      G      + K+G + + T E+ F N     
Sbjct: 168 TWYTVMAVTDPDAPKKSQGISAFVVHKDDPGFSVGSKERKLGIKGSPTREIHFENCEIPA 227

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             ++GD                      +V   + +L +AI Y + R   G  + D   +
Sbjct: 228 DRIIGDPGTGLKTALRTLDHTRPTIGAQAVGIAQGALDQAIAYVKDRKQFGRSISDFQGV 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A+ + AA  + +  A   +  +           +    K +   +A  V  +A
Sbjct: 288 QFMLADMAMKVEAARHMVYVAAAKAERGEPD------LGFITAAAKCFASDVAMEVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  GG+GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 342 VQLFGGAGYTRDFPVERMMRDAKITQIYEGTNQVQRVVMSRSLLKG 387


>gi|226308493|ref|YP_002768453.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229488424|ref|ZP_04382290.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|226187610|dbj|BAH35714.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229323928|gb|EEN89683.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 385

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 125/378 (33%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     L      G +      +++                      +
Sbjct: 33  PYAKDVDENARFPE--EALTALNASGFNAIHVPEAYDGQGADSVATCIVIEEVARVCGSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  +     P + +                     L+E+  G
Sbjct: 91  SLIPAVNKLGTMGLILKGSEELKSKVLPDLVNGGM--------------ASYALSEREAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 137 SDAASMRTRAKADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGISSFMVHKDDE 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 197 GFVVGPKEKKLGIKGSPTAELYFENCR---IPGDRIIGEPGTGFKTALETLDHTRPTIGA 253

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V LA+     A+ Y + R   G  + D   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 254 QAVGLAQGALDAALAYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYTSAARAER 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++   K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 314 GEKN------LGFISAAAKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERMMRDAKITQI 367

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 368 YEGTNQIQRVVMSRALLK 385


>gi|217973249|ref|YP_002358000.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217498384|gb|ACK46577.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 585

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/489 (20%), Positives = 184/489 (37%), Gaps = 55/489 (11%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLTDMRFLLEQVFDAPNTW-AQLPEIAEMVDIDTANAILEEAAKISSELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+ ++    G      D  F  +   +   I    +  
Sbjct: 60  RTGDEQGVLHQDNQVITPDGYKAVYKQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++     DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRNIRTRALPQDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  +        NG+    +++K+G + +AT  + F N  GFL+G+ N     + 
Sbjct: 227 FLVPKISVNTDGSLANANGVSVGSIEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGGI-------LIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+      G         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSSQAAYQMAADYAKERNQGVAAGGSPTGSESDAIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 LTIRAMTEAGRALSVFTGQQLDLAKYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL     +    
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL--AALNEFVA 464

Query: 475 DLGSSGKKV 483
           DL +  +  
Sbjct: 465 DLKAQMRAF 473


>gi|54022972|ref|YP_117214.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014480|dbj|BAD55850.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 386

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 127/379 (33%), Gaps = 31/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D     P     L      G +      ++                       +
Sbjct: 33  PYAKDVDGNSRFPE--EALSALNAAGFNAVHVPDAYGGQGADSVATCIVIEEVARVCGSS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P I + E                   L+E+  G
Sbjct: 91  SLIPAVNKLGTMGLILNGSEELKQKVLPDIVNGEM--------------ASYALSEREAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ ++  D         W  +   S  + ++A  +   G   +   +      
Sbjct: 137 SDAASMRTRARQDGDDWILNGSKCWITNGGKSSWYTVMAVTDPDKGANGISAFMVHKDDE 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G     L++K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 197 GFVVGPLEHKLGIKGSPTAELYFENCR---IPGDRIIGEPGTGFKTALQTLDHTRPTIGA 253

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V LA+     AI Y + R   G  + D    +  +AD+A+ I AA  + +  A   + 
Sbjct: 254 QAVGLAQGALDAAIAYTKDRKQFGQAIADFQNTQFMLADMAMKIEAARLMVYTSAARAER 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++   K +   +A  V   A++  GG+GY  +  + R  R++    I
Sbjct: 314 GEKN------LGFISAAAKCFASDVAMEVTTNAVQLFGGAGYTTDFPVERMMRDAKITQI 367

Query: 443 LLGSGNAMVLDVLNLLEKG 461
             G+     + +   L +G
Sbjct: 368 YEGTNQIQRVVMSRALLRG 386


>gi|224072021|ref|XP_002199716.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
           [Taeniopygia guttata]
          Length = 412

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 141/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA    +++    GL        ++       A+ I    +       
Sbjct: 55  PLAAQLDKEHRFPA--EQVKKMGGLGLLAMDVPEKYKGAGLDYLAYSIAVEEISRGCAST 112

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +   +      +    +      W     S E                   L+E   
Sbjct: 113 GVIVSVNNSLYLGPILKFGSEEQKHQWISPFTSGE-------------KIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTMARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 220 AGLSLGKKEDKLGIRASSTANLIFEDCR---IPKANLLGQPGMGFKIAMQTLDGGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     ++  +AD+A+ +  A  L++R A   D
Sbjct: 277 SQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFKLADMAVALEGARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++EAA A++ A        + A ++  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NGKPFTKEAAMAKLAA-------SEAATSIAHKAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   L K 
Sbjct: 390 IYEGTSEIQRLVIAGQLLKA 409


>gi|94497395|ref|ZP_01303966.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94423258|gb|EAT08288.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 381

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 145/403 (35%), Gaps = 27/403 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   + +  MA   T    A  P    WD+    P     ++ +   G        
Sbjct: 3   QFDLTDDQRAIQDMAQRFTA--DAITPFAGEWDEKHIFP--RDTIKSAAELGFGGIYVSE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +                    +S    +A M+    +  V   + P +    
Sbjct: 59  ASGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDRFGSQAVKDKYLPSMI--- 115

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  PM +        LTE   G+D AA+ +Q  +  D  Y ++G K F+S    + 
Sbjct: 116 -------PMDR---IGSYCLTEAGSGSDAAALKTQAVRDGDH-YVVTGSKQFISGGGENE 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             ++    G  G   +  L+ +    G+ +   + K+G  S  T ++ F      +   +
Sbjct: 165 LYVVMVRTGEDGPKGISCLVIEKDMEGVSFGAPERKLGWHSQPTAQVNFDGVRVPVDNLV 224

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    L+    S+ G +  + EA+ Y + R   G  + D    +  +
Sbjct: 225 GAEGEGFRIAMMGLDGGRLNIGACSLGGAQRCIDEAVRYTKDRKQFGQAIADFQNTQFML 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ AA  L +  A         +E A      A + K        +V+  A++  
Sbjct: 285 ADMLTELEAARTLLYAAAVKV------TENAPDKTRFAAMAKRLATDTGSSVVDRALQLH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           GG GY+ +  + R +R+   +SIL G+   M + V   + +  
Sbjct: 339 GGYGYLMDYPVERFWRDLRVHSILEGTNQVMRMIVARDMLRQG 381


>gi|52138966|gb|AAH82665.1| LOC494679 protein [Xenopus laevis]
          Length = 438

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 127/354 (35%), Gaps = 25/354 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPR 169
              GL     D S+          I               +     T  +M+     T  
Sbjct: 104 FELGLMGVEVDPSYGGTGASFFSSILVVEELAKVDPSVSVMCDIQNTLINMLFQRLGTEE 163

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++                       L+E   G+D  ++ +  QK  D      
Sbjct: 164 QKETYLPRLC--------------RDTLGSFCLSEAESGSDAFSLRTNAQKHKDYYIING 209

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +S  +  F+++A      G   +   +      G    + ++K+G R+++T  L
Sbjct: 210 SKMWISNSEQAGVFLVMANANPSAGYKGITCFIVPKDTEGFHIGKKEDKLGLRASSTCSL 269

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N        LG L        +M     +  A   +   +      I Y ++R   G
Sbjct: 270 TFDNVKVPESSILGQLGHGYKYAIEMLNEGRIGIAAQMLGLAQGCFDHTIPYTKQRVQFG 329

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +ID   M+  I+ +A  + A   L++  A   +  +   +EA  A       KY+  +
Sbjct: 330 KRIIDFQGMQHQISQVATQLEATRLLTYNAARLKEAGRDFKKEACMA-------KYFASE 382

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A    ++ +E +GG GY ++  I +++R+S   +I  G+ N  +  +  L+E+
Sbjct: 383 VACLTTSKCIEWMGGVGYTKDYPIEKYFRDSKIGTIYEGTSNIQLSTIAKLIEQ 436


>gi|134299349|ref|YP_001112845.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134052049|gb|ABO50020.1| Butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
          Length = 378

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 144/399 (36%), Gaps = 36/399 (9%)

Query: 68  CTAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
            T +++AR  A     P    Y       +K EFH     L+ +    GL        + 
Sbjct: 10  ETMRQMARKFAEQEIAPVALEYD------EKNEFHA---ELIPKLFETGLLTVGVPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                   +                 ++ S   +A  V +       + +   +      
Sbjct: 61  GPGIDTVGQAVVMEELARGCAAVATTVAASCLLAADPVVIAANHEQKQRFFNVL------ 114

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                            LTE   G+D+AA+ +  +   D         +  +  ++D F 
Sbjct: 115 --------NEGKLAAFCLTEPGAGSDVAALKTTAKLEGDEYVINGSKCFITNGGVADIFT 166

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A V+   G   +   + +    G+   + +NK+G RS++T ++ F +        L  
Sbjct: 167 VCASVDRSKGHKGLCFFIVEKDRPGVSVGKKENKLGIRSSSTTDVIFEDVRIPKENLLGK 226

Query: 305 -STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    MK   +     A ++V   + ++  A +YA+ R   G  +     ++  +AD
Sbjct: 227 EGDGFKIAMKALDMSRPMVAALAVGVAQAAMEYATNYAKERMAFGKPIAALQGIQFMLAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ I AA  L  +     D     S       +++ ++K +   M   V  +A++ +GG
Sbjct: 287 MAMQIEAARLLVHKACWLKDAGLPYS-------VLSSLSKGFAGDMCMKVTTDAVQVLGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GYI+E  + ++ R++    I  G+     + +   + K
Sbjct: 340 YGYIKEYPVEKYMRDAKIMQIYEGTSQVQRVVIAGNMLK 378


>gi|328705939|ref|XP_001952480.2| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 412

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 134/377 (35%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+ +  P     +      GL       +             A          A
Sbjct: 56  PIAAKTDREKLFP--KKQIEEMGELGLMAVCIPENVGGTGLDYLSYAIATEQISRCCASA 113

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +M+      + +      +  +++               P           L+E   G
Sbjct: 114 GTIMAVQNIYVNAINNFGNDKQKEEFL-------------RPFTDGKQIGSFSLSEPGLG 160

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +A++++  K            W  +   S   ++ A  +       +   L   +  
Sbjct: 161 SDASAVSTKATKKGSNYIINGTKSWTTNGFESKGLVLFASTDKSKKHKGISCFLLKKTFP 220

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G    + ++K+G R ++T  L F +        L           I   LD+  + V+  
Sbjct: 221 GFFVGKKEDKLGIRGSSTCGLVFEDCPVPEENVLGELGKGFNYAMI--TLDAGRIGVAAQ 278

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              +A+     A+ YA +R+  G  +    +++  IAD+AL + +A  L++R A+  D  
Sbjct: 279 ACGIAQASLELAVDYASKRNSFGVPIAKLQLIQNKIADMALRVESARLLTWRAAHLKDSN 338

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S S+EAA A++ A        + A     + ++ +GG GY+ +    R+YR++    I 
Sbjct: 339 ASHSKEAAMAKLAA-------SEAATYNAHQCIQVLGGMGYVSDMPAERYYRDARITEIY 391

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + K
Sbjct: 392 EGTSEIQKIVIAANVFK 408


>gi|302343818|ref|YP_003808347.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301640431|gb|ADK85753.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 132/369 (35%), Gaps = 24/369 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E  P    +++      L   I    +  +         A      A +      + 
Sbjct: 32  DEKEQFPT--EIIKALAQADLLGLIIPEQYGGLGGGCLENCIAVEELSRACVGVSTSYAA 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +   A  + L  +    + + P+I   E                   LTE   G+D +AI
Sbjct: 90  TFLGAFPILLFGSEAQKEKYLPQIARGE-------------KLCAFALTESAAGSDASAI 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +K  D        +W  +   +  + ++A  +   G       + +    G    +
Sbjct: 137 RTEARKEGDHYVLNGSKQWITNGGHAGIYTVIAITDRTKGPRGASAFIVEADDEGFSVGK 196

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKI--LIYLDSAIMSVSGMRVS 331
            ++K+G R++AT EL F++        L     G V  M+   L         V   + +
Sbjct: 197 KESKLGIRASATAELIFNDCRIPADRLLSREGMGFVAAMRTFDLSRPGVGAQGVGVAQGA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA  +AR R      +I    +   +AD+A  + AA AL + +A   D        A 
Sbjct: 257 LDEAAAFARTRRQFDKPIITFQAVAHMLADMATKVEAARALVYCVARHIDSG------AK 310

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               ++ + K +   +A  V   A++ +GG GY+ E  + +  R++    I  G+     
Sbjct: 311 DISKVSAMAKVFPTDVAMEVTTNAVQVMGGHGYMREYPVEKMMRDAKILQIYEGTNQIQR 370

Query: 452 LDVLNLLEK 460
             +   L K
Sbjct: 371 NVIGQELNK 379


>gi|307293156|ref|ZP_07573002.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881222|gb|EFN12438.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 380

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 144/406 (35%), Gaps = 33/406 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           + ++ L+     +  MA   T    A  P    WD+    P     +R +   G      
Sbjct: 1   MSQFDLTEDQLAIQEMARRFTA--DAITPFAAEWDEKHIFP--RETIRAAAELGFGSIYV 56

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +   +                    +S    ++ M+       V   + P +  
Sbjct: 57  SEEAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMASWMIDRFGGKAVKDKYLPSMVP 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                   LTE   G+D AA+ ++  K  D  Y ++G K F+S    
Sbjct: 117 ME-------------RIGSYCLTEAGSGSDAAALKTRAVKDGDH-YVVTGSKQFISGGGE 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +   ++    G  G   +  L+ +    G+ +   + K+G  S  T ++ F      +  
Sbjct: 163 NEIYVVMVRTGDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFDGVRVPV-- 220

Query: 301 DLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             N+  G  E  +I +       L+    S+ G +  + EA+ Y + R   G  + D   
Sbjct: 221 -ENLVGGEGEGFRIAMMGLDGGRLNIGACSLGGAQRCIDEALTYTKDRKQFGQSIADFQN 279

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+  ++ AA  L +  A         +E A      A + K        +V+  
Sbjct: 280 TQFMLADMETELQAARTLLYAAAVKV------TENAPDKTRFAAMAKRLATDTGSSVVDR 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG GY+ +  + R +R+   +SIL G+   M + +   + +
Sbjct: 334 ALQLHGGYGYLMDYPVERFWRDLRVHSILEGTNQVMRMIIARDMLR 379


>gi|57525201|ref|NP_001006193.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus
           gallus]
 gi|53130416|emb|CAG31537.1| hypothetical protein RCJMB04_7j20 [Gallus gallus]
          Length = 416

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 135/377 (35%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA    +++    GL        F+       A+ I    +       
Sbjct: 59  PLAAELDREHRFPA--EQVKKMGSLGLLAVEVPEQFKGAGLDYLAYSIAVEEISRGCAST 116

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      +    +      W     S                     L+E   
Sbjct: 117 GVIASVNNSLYLGPILKFGSEEQKHKWISPFTSG-------------DKIGCFALSEPGN 163

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 164 GSDAGAASTVARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPT 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL   + ++K+G R+++T  L F +        L  +  G    M+ L    +  A  +
Sbjct: 224 AGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMGFKIAMQTLDGGRIGIASQA 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  A+ YA +R   G  +     ++  +AD+A+ + +A  L++R A   D  K
Sbjct: 284 LGIAQAALDCAVDYAEKRMAFGSPITKLQAIQFKLADMAVALESARLLTWRAAMLKDNGK 343

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAA A++ A        + A  +  +A++ +GG GY+ E    RHYR++    I  
Sbjct: 344 PFTKEAAMAKLAA-------SEAATNIAHQAIQILGGMGYVTEMPAERHYRDARITEIYE 396

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+     L +   L K 
Sbjct: 397 GTSEIQRLVIAGQLLKA 413


>gi|108757986|ref|YP_631942.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108461866|gb|ABF87051.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 381

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 139/378 (36%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WDK E  P    ++R     G+   +    F            A           
Sbjct: 26  PYAREWDKDETFPM--EVVRELGQLGVMGMLVAEEFGGAAMDSLAVAVAVEEIARYDGSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +    S + +  +    + + PK+ + EY                 GLTE   
Sbjct: 84  ALTVASHNGLGTSHLRVFGSDAQRQKYLPKLATGEY-------------LGAWGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ +   +  DG        +     + D F++LA    +     +   L +   
Sbjct: 131 GSDASSMKTTAMRKGDGWVLNGAKMFITQGTVGDVFVVLAVTSPQKRQKGITAFLLEKGL 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMS 324
            G   + +  K+G RS+ T EL   N        +     G ++ MKIL    +    ++
Sbjct: 191 PGFSQRAIHGKLGMRSSDTAELVLENVEVPDSARVGELDHGFIDTMKILDRGRITIGALA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L E+I Y+R R   G  + +   ++  +AD+  ++ AA  L  R A   DE K
Sbjct: 251 VGLGRGALEESIGYSRERTAFGQPISEFQGLRWMMADMKTELDAARLLVHRAAKLADEGK 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EA+         K +  + A     +A++  GG GY  E  + R+ R++    I  
Sbjct: 311 PYSREASMG-------KLFASEAAMRACNKAVQIHGGYGYTREFPVERYLRDAKLCEIGE 363

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+       +     KG 
Sbjct: 364 GTSEIQRTIIARETFKGA 381


>gi|113970269|ref|YP_734062.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113884953|gb|ABI39005.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 585

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/559 (18%), Positives = 205/559 (36%), Gaps = 61/559 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P+    +L  + E V   TA  +   A   + +L H   
Sbjct: 1   MNPYQAPLADMRFLLEQVFDAPNTW-AQLPDIAEMVDMDTAGAILEEAAKISAELIHPLN 59

Query: 89  PGG------ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G       + ++V     + A+  +    G      +  F  +   +   +    +  
Sbjct: 60  RAGDEQGVLHQDNRVITPDGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + PK++S E+             A  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW-------------AGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGC 255
           TE + G+D+  I ++     DG Y +SG K F++    D       ++LA++     +  
Sbjct: 167 TEPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP+   +     G  NG+    +++K+G + +AT  + F    G+L+G+ N     + 
Sbjct: 227 FLVPKTTVNADGSLGQANGVTVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R+     GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             I     A  ALS       D AK      +++ A Y  ++ P+ K +           
Sbjct: 347 MTIRAMTEAGRALSVFTGKQLDLAKYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTL 472
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL   ++  + L
Sbjct: 407 AQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAEL 466

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           +  +    +     +    +       +A  + E     +  A +  + ++ + D F   
Sbjct: 467 KAQMRGFTRVDAVKVAAVCARLDALVIVAESVNEH--KVAQPALINASAVDFL-DAFGYT 523

Query: 533 RFLDNCHSTHCMLHGRFNA 551
            +         ML    +A
Sbjct: 524 LYGFYW---LAMLDKAVDA 539


>gi|268317756|ref|YP_003291475.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335290|gb|ACY49087.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 558

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 120/508 (23%), Positives = 204/508 (40%), Gaps = 44/508 (8%)

Query: 27  QPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNT 81
           Q P  +  N Y +DSLL   +A          +  EL+ LG          L      + 
Sbjct: 4   QEPPRLD-NTYEADSLLRGYLARALPAEVLREIEPELQELGTLAGGP-LYHLQLEDRTSE 61

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P    +   GER D++     W      ++  GL  + +++ +    R      + A++Y
Sbjct: 62  PVHIPWSAWGERIDEIRLTRVWQEAEPLAVRFGLVATAYEQRYGAFSRIH----QFAKVY 117

Query: 142 LMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L A     +      +  +A  +      R+ +   P + SR            T    G
Sbjct: 118 LFAPSTDIYACPLAMTDGAARTLLDSGNRRLIERALPHLTSRN---------PATFWTSG 168

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TE  GG+D+ +  +  +   DG + L G KWF+S+  S   ++LA+ EG       +
Sbjct: 169 QWMTELTGGSDVGSSQTVARPEPDGTWHLYGRKWFVSAITSQMALILARPEGNPPGGRGL 228

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F      E G P G    RLK+K+G R   T E+         +  L   T  +  M 
Sbjct: 229 ALFYAELRDERGRPRGFQILRLKDKLGTRKLPTAEVLLEGLPAEPVAGLTHGTRTIAPML 288

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +    +AI + + MR  L  A  YARRR   G  L + P+    +A +  + AAA  L+
Sbjct: 289 NVTRTWNAITAAALMRRGLLLARDYARRRVAFGRPLAEHPLHLDTLAGLQAETAAAFHLA 348

Query: 374 FRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           F +A      +  ++  +E A  R++ P+ K    + A AV++E +E  GG+GY+E+  +
Sbjct: 349 FCVAELMGRVETDEASDDERALLRLLTPVAKLTTARQAVAVLSEVLEAFGGAGYVEDTGL 408

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVI 484
               R++    I  G+ N + LDVL  LE    L      F+     + + L    ++  
Sbjct: 409 PVLLRDAQVLPIWEGTTNVLALDVLRALEDIGGLQPLHKAFDVWLQDVPESLVPLAREAR 468

Query: 485 TI-------LRDSISLCKEDKGLARFLT 505
                    L ++ +  +  +  AR   
Sbjct: 469 AALQAADAWLTETAADPERLQADARRFA 496


>gi|291280210|ref|YP_003497045.1| butyryl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
 gi|290754912|dbj|BAI81289.1| butyryl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
          Length = 379

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 137/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L+++    G   +     +          I        A    
Sbjct: 26  PIAADIDKNHEIPA--DLVKKIGEMGFLGTYIPEEYGGAGLDYFSYIMTVEEVSKACAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S   + +A  +         K + P + + E                 + LTE   
Sbjct: 84  GVMISAHTSLAADPILQFGNEEQKKKYLPPLATGE-------------RIGCIMLTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A I++  +   D         +  +       ++ A  +  +    +   + D   
Sbjct: 131 GSDVANISTTYRDEGDHYVVNGSKIFITNGAFRGISVLFATKDKNLKHKGLSAFILDLES 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G+   + + K+G R + T      N     +   N+     +  KI +  L+   + ++
Sbjct: 191 EGVEILKNEEKLGIRGSYTTAFALDNVK---IPKENLLGNEGDGFKIAMETLNGGRIGIA 247

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE        Y + R   G  L     ++  +AD+A  I A+  ++++ A   D
Sbjct: 248 AQALGIAEGAFEKCLSYVQERKQFGKPLAAFQAIQFKLADMATRIEASKLITYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ + E+A A++       +  + A  V  EA++  GG GYI E  + R +R++    
Sbjct: 308 MKKTNAIESAMAKM-------YASETATFVTKEAVQIHGGYGYICEYEVERMFRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +  +L K
Sbjct: 361 IYEGTNEVQRIVISKMLLK 379


>gi|197104750|ref|YP_002130127.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478170|gb|ACG77698.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 388

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 139/380 (36%), Gaps = 26/380 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    P    L  +    GLH    +  F  +      H +    +   +
Sbjct: 31  RIAPLAAEIDQTNSFP--RELWPQMGELGLHGITVEEEFGGLGLGYLEHVVAMEEVSRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    T    + + PK+ S E+                L ++E
Sbjct: 89  ASIGLSYGAHSNLCVNQLRRWGTEEQKRRYLPKLISGEH-------------VGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  ++P +D  ++ A+ +       +   L +
Sbjct: 136 AGSGSDVVSMRLRAEKKGDRYVLNGTKFWITNAPHADTLVVYAKTDPDADSRGITAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F +       ++G LN   G +           A
Sbjct: 196 KDFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPLNGGVGVLMSGLDYERAVLA 255

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  +   + Y R R   G  +    +M+  IAD+ + + +A A  + +A + D
Sbjct: 256 AGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADMYVALNSARAYVYAVAKACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   +AA A +MA        + A  V  EA++ +GG+GY +E  + R  R++    
Sbjct: 316 AGMTTRFDAAGAILMA-------SENAVKVALEAIQALGGAGYTKEYPVERMLRDAKLYD 368

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+       +   L  G
Sbjct: 369 IGAGTNEIRRFLIGRELLGG 388


>gi|296156552|ref|ZP_06839390.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295893151|gb|EFG72931.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 393

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 130/376 (34%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH I    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGDLGVLGMTVSEEYGGANMGYTAHMIAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P  D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKLRAEKNGDHYVLNGTKMWITNGPDCDTLVVYAKTDPEASSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +  +K+G R + T EL F +        L    G  + +  +  LD     ++G
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGAKVL--MSGLDYERAVLAG 254

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  A     + Y   R   G  + +  +++  +AD+   + A  A  + +    D 
Sbjct: 255 GPTGIMVAVMDAVVPYIHDRKQFGQPIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                E     R        +  + A  +  EA++ +GG+GYI E  + R +R++    I
Sbjct: 315 --LGKEHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 373 GAGTSEIRRMLIGREL 388


>gi|256822285|ref|YP_003146248.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795824|gb|ACV26480.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 386

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 145/403 (35%), Gaps = 33/403 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R       +     P  E+ D     P  H L ++    GL     +  +   
Sbjct: 10  GETADMIREMVRGFAE-KEIAPIAEKTDHDNLFP--HHLWKKFGELGLLGITVEEEYGGS 66

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H +    +   +        + S    + +    +    + + PK+ S E+   
Sbjct: 67  GMGYLEHVVAMEEISRASASIGLSYGAHSNLCVNQIRRNGSEEQKQKYLPKLCSGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + +   D         W  + P +D  ++ 
Sbjct: 124 ----------VGALAMSEPGAGSDVVGMKLRAELKGDKYILNGNKMWITNGPEADVLVVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E   G   +   + +    G    +  +K+G R + T EL F +         NV  
Sbjct: 174 AKTEPDAGSKGITAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPA---ENVMG 230

Query: 307 GPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KIL+  LD     +S      MR  +   + Y   R   G  +    +++  +A
Sbjct: 231 PINEGVKILMSGLDYERAVLSAGPLGIMRACMDVVVPYVHERKQFGKPIGSFQLIQGKVA 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A+ A  + +A S D  ++  ++AA A + A        + A  +  +A++ +G
Sbjct: 291 DMYTTMNASRAYVYAVAKSCDRGETTRKDAAAAILFAA-------ENATKLALDAIQVLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G+GYI E S  R  R++    I  G+     + +   L   T 
Sbjct: 344 GNGYINEYSTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETA 386


>gi|28867735|ref|NP_790354.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28850970|gb|AAO54049.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 592

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 93/493 (18%), Positives = 177/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGDPVFGGMGMPKIVSAQVEEMINSASLAFGLYAMLTSGACVSINTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGMIRTKAEPQTDGAYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G+ N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSLGARNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAVDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA       A ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLAALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q + +S   +    R   +  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFIDTSDSSLGEFTRPLTAAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|326336526|ref|ZP_08202696.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691399|gb|EGD33368.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 378

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 146/371 (39%), Gaps = 28/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
            WDK +  P    + R++   G    +    F         +      +          +
Sbjct: 31  EWDKTQTFPI--DVFRKAGELGFMGILVPEEFGGSGLGYHEYITIVDAISQTDPSIGLSI 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +         + W PK+ S E+                 G+TE   G+D 
Sbjct: 89  AAHNSLCVNHILTFANKEQKRRWLPKLASGEH-------------IGAWGITEHNTGSDA 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGL 270
             + +   K  D ++ L+G K F++  +S   +++ A+   +     +   + +    G 
Sbjct: 136 GGMHTTAIKKGD-MWVLNGTKNFITHAISANVVVVIARTGEKGDKHGMTAFVVERGTKGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              +  +K+G R++ T EL F +        L  +  G ++ MK+L    +    +S+  
Sbjct: 195 SNGKKISKLGMRASETAELIFQDCLIPDENRLGEIGEGFIQAMKVLDGGRISIGALSLGT 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + ++  AI YA+ R   G  +I    +   +A+++ +I AA  +  + A+  +  +  +
Sbjct: 255 AKGAVNAAIKYAKERTQFGKPIISFQAIGFKLAELSTEIEAAELMLHKAAHLKETHQKVT 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++AA A       K +  ++      EA++  GG GY  +  + + YR++   +I  G+ 
Sbjct: 315 QQAAMA-------KLYASELCVKASNEAIQIHGGYGYTTDYPVEKFYRDAKLCTIGEGTS 367

Query: 448 NAMVLDVLNLL 458
             + L +   L
Sbjct: 368 EILKLVISRNL 378


>gi|221124478|ref|XP_002165995.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           [Hydra magnipapillata]
          Length = 387

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 131/379 (34%), Gaps = 34/379 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         +  ++  +G  C      +      + + +                
Sbjct: 29  FHADWEEQGYVAREVWNKAGENGFLCMTMPEEYGGSEADKLYSVIQMEELARGGFTGIGF 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  +    TP     + PK+ S E                 + ++E   G+D+
Sbjct: 89  GLHSEIVAPYILHYGTPEQKARYLPKLASGEM-------------VGAIAMSEPAAGSDL 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             I S   +  DG Y L+G K F+++   +D  +++A+     G      LL +    G 
Sbjct: 136 QGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGTSLLLVERGMPGF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
              +   K+G ++  T EL F N        L  +    +    L+       L  AI +
Sbjct: 196 SVGQRLKKMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICLMEQLPWERLQIAIGA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           VS  + ++   + Y + R V G  +      +  +A++   +  A     +        K
Sbjct: 256 VSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVARVFVDKCCELI--GK 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            + + A      A + KYW   +   V+ E ++  GG GY+ E  I R Y ++    I  
Sbjct: 314 DQLDTA-----TASMAKYWTTDLQCKVMDECVQLFGGYGYMWEYPITRAYADARVQRIYG 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M   +   +  G  
Sbjct: 369 GTNEIMKEVITRSMGLGGK 387


>gi|187927451|ref|YP_001897938.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309779847|ref|ZP_07674602.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|187724341|gb|ACD25506.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921424|gb|EFP67066.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 595

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 93/486 (19%), Positives = 181/486 (37%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFKEAYQQYVEAG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  +          I  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPSLGCDPEYGGQGLPI--LINNALYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S  +  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTRAEPLADGSYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  N +    ++
Sbjct: 197 IFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDANGNPGERNTVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   + S+    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +I  P ++R +           A S+ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEGGRAFSYWIALQIDREL 376

Query: 385 SRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S S+E+A         ++ PI K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHSDESARKDAADLVALLTPIAKAFLSDNAFISTNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   +++D +     ++
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGAKMKKFGKLVQDFVEAEGTNE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFI 489


>gi|149184496|ref|ZP_01862814.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21]
 gi|148831816|gb|EDL50249.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21]
          Length = 601

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/485 (19%), Positives = 172/485 (35%), Gaps = 59/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRSIHDGLHCS 118
           + V      E  +        L+      G        V   P +     +    G    
Sbjct: 35  DDVTDAVINEGGKFCAEVLAPLNRVGDEHGCVRNDDGSVTTPPGFKEAFDQFREAGWGTL 94

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAP 176
             D  F        H +       ++       M P +T+ ++ AL    +      + P
Sbjct: 95  AHDEEFGGQGMP--HVLGFVMEEFISSANQAFGMYPGLTNGAISALLAKGSDEQKAMYLP 152

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE   GTD+  I ++ + + DG Y ++G K F+S
Sbjct: 153 KMVSGEWTGT-------------MNLTEPHCGTDLGMIRTKAEPLGDGSYAITGTKIFIS 199

Query: 237 SPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +   D       ++LA+  G       +  F+VP+ L +     G  NG+    ++ K+G
Sbjct: 200 AGEHDMSENIIHLVLAKTPGAPDSTKGISLFVVPKFLVNEDGTPGERNGVMCGSIEEKMG 259

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              N+T  L +    G+++G+ N     +  M     L   +  +S   V+   A+ YA 
Sbjct: 260 IHGNSTCVLNYDGAKGWMVGEENKGLAAMFIMMNAARLGVGMQGLSQAEVAYQNAVAYAL 319

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------E 382
            R                  +   P ++R + D      A  AL+       D       
Sbjct: 320 DRRQGRALTGPAEPEAQADPIFVHPDVRRMLMDAKAFTEAMRALALWGGLLVDLTHKAQT 379

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            + R+E      +M P+ K +       V     +  GG GYIEE  +++  R++    I
Sbjct: 380 EEERAEADLLLGLMTPVIKGYGTDKGYEVATNMQQVFGGHGYIEEWGMSQFVRDARIAQI 439

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
             G+     +D+    L +KG    +  F  +  ++ +   K I  L+D     ++  G 
Sbjct: 440 YEGTNGVQAMDLCGRKLAQKGGAAVQAFFKHVGDEIAAG--KEIDELKDMAEALEKALGQ 497

Query: 501 ARFLT 505
            +  T
Sbjct: 498 QQAAT 502


>gi|291614632|ref|YP_003524789.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291584744|gb|ADE12402.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 570

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 136/512 (26%), Positives = 212/512 (41%), Gaps = 32/512 (6%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N    D L      ++        + +    L E      A EL+  A+   P L  +  
Sbjct: 19  NLLDEDPLGEEFWKHWLGAMRYRKLRRHFSALSE--SGALATELSARADKQGPTLATHDA 76

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V  HP +H L R +   G+    +D +F    R+  H       Y  AQ E G
Sbjct: 77  RGMRRDRVVQHPDYHELERLAYGRGIVGIKYDAAFLAQHREVRHLAGFGAGYYFAQSEIG 136

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                 +T      L   P   +    +           A   +      + LTE++GG+
Sbjct: 137 LYCPICMTDGVGRVLERRPAGTQTPLYETT----IAHLAASDLENLWQGAMFLTERQGGS 192

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV------GCFLVPRLLE 263
           D+ A T    +     + L+G KWF S+  +DA + LA++ G        G FLV R   
Sbjct: 193 DVGANTVTATRQG-RRWLLNGDKWFCSNVAADAILALARMPGGAPGTKGLGLFLVLRQEP 251

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G+   +  QRLK+K+G RS AT E+ F NT   L+   N     + +M  L  L +A+ 
Sbjct: 252 AGNSGTIRIQRLKDKLGVRSMATGEVTFENTVAHLVAGENEGFKQMAEMLNLSRLYNAVA 311

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV+GMR +L EA+ Y   R+  G  L + P+ + A+AD+  +      L F    + D +
Sbjct: 312 SVAGMRRALLEALKYGAGRNAFGHRLDELPLWRAAMADLVAEHLGIFTLVFETVRALDRS 371

Query: 384 KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++A    RI  P+ K    K+A   ++EAME IGG+ YIEE  + R  R+     I
Sbjct: 372 DNGDDQARKLLRIAIPMAKALSGKLAVFAVSEAMEAIGGNAYIEESILPRLLRDCQVLPI 431

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL--------- 493
             G+ + + LD L  ++K  +  E LF+ +   L          LR  +           
Sbjct: 432 WEGTTHILTLDALRAIQKEGS-HEALFARVRLALSRVRAFDTGPLRARLDDDIGRLEMLL 490

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGM 522
               +  +  AR   E +    + A L    M
Sbjct: 491 KRPVESQQREARQWLESVGRTFTLALLLENAM 522


>gi|113866203|ref|YP_724692.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113524979|emb|CAJ91324.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 376

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 141/394 (35%), Gaps = 31/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     Q     P   +WD+ +  P    + R     G +      ++      
Sbjct: 7   QEMIRDAVRQFAQ-EVIAPQAAQWDRDKTFP--KDVHRELAALGAYGVAVPEAYGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+    +    + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMLMSFASEAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D        ++  S   +D  I+LA  
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDHYVLNGVKQFITSGQNADVAIVLAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   +   S  G    RL++K+G  S+ T ++ F +        L    G  
Sbjct: 171 DKAAGKRGISAFIVPTSTPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLGDEGGGY 230

Query: 310 EDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +    L  L+   + ++   + +       A+ YA+ R   G  L     ++  +A++A 
Sbjct: 231 K--MALSGLEGGRIGIASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQFRLAEMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  + +  A   D  +   +EAA A       K +  +MA  V ++A++  GG GY
Sbjct: 289 RIDVARQMVWHAAALRDAGRPCLKEAAMA-------KLFASEMAERVCSDAIQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|152983819|ref|YP_001346002.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150958977|gb|ABR81002.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 598

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 90/502 (17%), Positives = 180/502 (35%), Gaps = 59/502 (11%)

Query: 55  HKELELLGE-----YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHAL 106
           H   + LG       +++   +E ++        L+      G  +D   V     +   
Sbjct: 22  HGHYQALGASDATPDMVAAILEEGSKFCEQVLAPLNRSGDEEGCHFDNGAVTTPKGFKEA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             + +  G +    D ++       +  +  + +   + +  G     +  + S +    
Sbjct: 82  YAQYVEGGWNGVASDPAYGGQGLPHSLGLLLSEMIGASNVSWGMYPGLTRGAMSAIHAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +      + P++ +  +  T             + LTE   GTD+  I ++    +DG +
Sbjct: 142 SQAQKDTYLPRMTAGTWTGT-------------MCLTEPHCGTDLGIIKTRAVPNADGSH 188

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            +SG K F+S+   D       ++LA++         +  F+VP+ L D     G+ N +
Sbjct: 189 SISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAEGNVGARNAV 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  + F    G+L+G+ N     +  M     L + +  +     
Sbjct: 249 SCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGET 308

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   A+ YAR R                  +I  P ++R +  +        AL++  A 
Sbjct: 309 SYQGAVRYARERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQ 368

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +A  R   A     + PI K +  +    V    M+  GG GYI E  + +
Sbjct: 369 LLDTEHLSQDAAERERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQ 428

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDS 490
             R+     I  G+     LD+L     G    L       + Q   +        L+  
Sbjct: 429 LVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQAGH--PQLKGQ 486

Query: 491 ISLCKEDKGLARFLTEKIALAS 512
           ++           LT+++ LA+
Sbjct: 487 VAQLAALNAQWGELTQQVGLAA 508


>gi|157374614|ref|YP_001473214.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157316988|gb|ABV36086.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 385

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 146/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++ A +A+  +       P   +WD+    P    +++R+   G        
Sbjct: 2   DFNLNEDQRQFANLAHQFS--QEELAPFASKWDEEHHFP--KDVIQRAGELGFCSLYSPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +           M       +++    +  MV    +  +   W+  + +  
Sbjct: 58  SEGGMGLSRLDSSIIFEQLSMGCTATTAMLTIHNMATWMVTSFGSQTLRDAWSESLTTG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A++ ++  +  D  Y +SG K F+S   +  
Sbjct: 117 ------------QKLASYCLTEAGAGSDAASLKTKAVRDGDE-YVISGAKMFISGAGATE 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +  ++      G+ Y + ++K+G  +  T E+ F      +   L
Sbjct: 164 LLVVMCRTGEAGPKGISAIVVPADAAGITYGKAEDKMGWNAQPTREITFDKVRVPVSNLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  S+   + +L  A  Y   R   G  +     ++  +
Sbjct: 224 GEEGQGFTFAMKGLDGGRINIATCSIGTAQAALERATQYMNERKQFGKPIAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A   DE          A     + K +   +   V   A++  
Sbjct: 284 ADMATELVAARQLVRLAAFKLDEKDPE------ATAYCAMAKRFATDIGFQVCDAALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI E  + RH R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIIARRL 376


>gi|83746627|ref|ZP_00943677.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207742321|ref|YP_002258713.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726761|gb|EAP73889.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593711|emb|CAQ60638.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 595

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/486 (18%), Positives = 178/486 (36%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPTGFKDAYKQYVDGG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  +          I  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPALGCDPEYGGQGLPI--LINNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S  +  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTRAEPLADGAYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISAGEHDLSENIVHLVLARLPDAPPGTKGISLFVVPKFIPDAGGKPGERNGVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   +  +    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +I  P ++R +           A ++ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDREL 376

Query: 385 ------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                 +R E A    ++ P+ K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHPNESARKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   I++D +      +
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGARMKKFGKIVQDFVEAEGTSE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFI 489


>gi|120555047|ref|YP_959398.1| butyryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
 gi|120324896|gb|ABM19211.1| Butyryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
          Length = 388

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 142/379 (37%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P    +++ +   G        +   +   +           MA    
Sbjct: 26  PFAGQWDVDHTFPV--EVMKEAGEMGFMGIYTPEALGGMGLSRLDTSVIVEELAMACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  MVA   +  + +++ P++ S E+                  LTE   G
Sbjct: 84  AAFITIHNMATWMVASFASDDLKQEFVPRLASGEW-------------LASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           +D A++ ++  +  D  Y ++G K F+S   + D  +++A+  +   G   +   +   +
Sbjct: 131 SDAASLRTRAVRDGD-SYVINGSKMFISGAGATDVLVLMARTGDADSGAKGISTFVIPAN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G+ Y + + K+G  S  T  +   +        +     G    MK L    L+ A  
Sbjct: 190 AEGVSYGKNEEKMGWHSQPTRMVTLEDVRIPASNRVGEEGDGFAIAMKGLDGGRLNIATC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +L  A +Y   R   G  L     ++  +AD+A ++ AA  +    A   D  
Sbjct: 250 SLGGAQAALLRARNYLHERQQFGKPLAAFQALQFKLADMATNLVAARQMVRLGAFKLDAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A +   + K +       V  EA++  GG GYI E  + R+ R+   + IL
Sbjct: 310 DPE------ATLHCAMAKRFATDACFEVANEALQLHGGYGYIREYPLERYVRDLRVHQIL 363

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            G+   M L +   + +  
Sbjct: 364 EGTNEIMRLIIARRMLEDG 382


>gi|270157370|ref|ZP_06186027.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289164236|ref|YP_003454374.1| acyl CoA dehydrogenase, short chain specific [Legionella
           longbeachae NSW150]
 gi|269989395|gb|EEZ95649.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857409|emb|CBJ11237.1| acyl CoA dehydrogenase, short chain specific [Legionella
           longbeachae NSW150]
          Length = 384

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 142/373 (38%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+ ++ P   A+LR +   G+   +           +              +  
Sbjct: 26  PMADNWDEHDYFPI--AVLREAAALGMAGMMAREDIGGAQLTRLDSALLFEQLATGCIST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S      S+V       +   W PK+ S E             V     LTE   G
Sbjct: 84  SAYLSIHNMVTSLVDRYAHSELRTQWGPKLTSME-------------VLASYCLTEPESG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K  D  Y L+G K F+S   +SD ++ + +  G      +  LL +   
Sbjct: 131 SDAASLKTKAVKDGD-YYVLNGSKAFISGGSVSDVYLCMVRT-GDESHHGISCLLIEKDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + +L+ K+G RS  T  + F N        +GD  +      +      ++ A  S
Sbjct: 189 PGLSFGKLEKKMGWRSQPTCIVYFENCRIPIANRVGDEGMGFKIALNALNGGRINIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G    L     Y   R   G  L +   ++   AD+  D  AA  + +R AN+ D+ +
Sbjct: 249 LGGALACLRLTQAYMHERKQFGKPLSEMQALRFYFADMLTDYEAARLMVYRAANAMDKNE 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     +   + K +   +A  +  +AM+  GG GY+ +  I R +R+   + IL 
Sbjct: 309 PN------VPMYCAMAKRFATDVAFRISDKAMQIHGGYGYLRDYQIERIFRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNL 457
           G+   M   V   
Sbjct: 363 GTNEIMREIVAKA 375


>gi|260549873|ref|ZP_05824089.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407123|gb|EEX00600.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 607

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 178/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AA+           PI K +  ++        M
Sbjct: 357 AEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +  +  + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCATHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|121596063|ref|YP_987959.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120608143|gb|ABM43883.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 376

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 85/394 (21%), Positives = 150/394 (38%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   RWDK    P       R  H GL       ++   V
Sbjct: 5   QDQEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAALG---AYGICV 53

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++        L L   LE         ++A  V       +   +      R++     
Sbjct: 54  PEELGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDW----L 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLA 247
            P+ +  +     LTE   G+D +A+ +   K  +  Y ++G K F++S  +    I++A
Sbjct: 110 TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKNGHVAIVIA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   L   +  G    RL++K+G  S+ T ++ F +       L+G    
Sbjct: 169 VTDKGAGKKGMSAFLVPTNTPGYVVARLEDKLGQHSSDTAQINFDHCRIPAENLIGAEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  SV   R +   A+ Y++ R   G  + +   +   +AD A 
Sbjct: 229 GYKIALGALEGGRIGIAAQSVGMARSAFDAALAYSKERESFGQPIFNHQAVGFRLADCAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +  A   D  +   +EAA A       K +  +MA  V + A++ +GG G 
Sbjct: 289 QIEAARQLIWHAAALRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGV 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VNDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|291523988|emb|CBK89575.1| Acyl-CoA dehydrogenases [Eubacterium rectale DSM 17629]
 gi|291528550|emb|CBK94136.1| Acyl-CoA dehydrogenases [Eubacterium rectale M104/1]
          Length = 389

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 132/382 (34%), Gaps = 28/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    + +    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEVFPA--ETVAKMGKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    K + P + S                    GLTE   
Sbjct: 84  GVIVSAHTSLCIDPIMTFGTEEQKKKYVPDLASG-------------KKIGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGCQTKAVLDGDE-WVLNGSKCFITNGKVADVYIIIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + D    G  +   + K+G R ++T EL F +       LLG                 +
Sbjct: 190 IVDKGTPGFSFGTKEKKMGIRGSSTYELIFEDARIPKDALLGKEGRGFPIAMHTLDGGRI 249

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L   I Y + R   G  +  Q   +  +AD+A  I AA  L +  A 
Sbjct: 250 GIAAQALGIAEGALERTIEYTKERKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAM 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              E     + +    + A   K +  + A AV  E ++  GG GYI E  + R  R++ 
Sbjct: 310 KKAEFAKNPKVS--YSVDAAKAKLFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAK 367

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     + +   L +
Sbjct: 368 ITEIYEGTSEVQRMVISGSLLR 389


>gi|296160331|ref|ZP_06843148.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295889312|gb|EFG69113.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 376

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 139/382 (36%), Gaps = 34/382 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P    WD+    P    + R+    G +  +   ++                    
Sbjct: 20  EAITPHAATWDRERTFP--KDVHRQLAELGAYGVLVPETYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        +DW               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLTYGNDAQKRDWL-------------TPLARGEMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +  D  Y L+G K F++S  +    I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTATRKGD-TYVLNGVKQFITSGKNGHVAIVMAVTDKAAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------ 316
                 G    R+++K+G  S+ T ++ F +         N+     E  +I +      
Sbjct: 184 VPTDTQGYVVARVEDKLGQHSSDTAQIIFEDCRVPA---ANLIGAQGEGYRIALSGLEGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  
Sbjct: 241 RIGIAAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQFRLADMATQLEAARQLIWHA 300

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+
Sbjct: 301 ASLKDAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRD 353

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+ +   + +   L
Sbjct: 354 VRVCQIYEGTSDIQKILIARGL 375


>gi|225378408|ref|ZP_03755629.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM
           16841]
 gi|225209742|gb|EEG92096.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM
           16841]
          Length = 384

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 136/382 (35%), Gaps = 33/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    +++    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEQFPA--ETVKKMAKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +   + + E                   LTE   
Sbjct: 84  GVVVSAHTSLCIDPIMTYGTEEQKQKYVRPLATGE-------------KLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGAQTKAVLDGDE-WVLNGSKCFITNGKVADVYIVIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G  +   + K+G R ++T EL F +       LLG                 +
Sbjct: 190 IVEKGAPGFSFGTKEKKMGIRGSSTYELIFEDCRIPKDALLGPEGKGFPIAMHTLDGGRI 249

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L  AI Y + R   G  +  Q   +  +AD+A  I AA  L ++ A 
Sbjct: 250 GIASQALGIAEGALERAIAYTKERKQFGRSIAQQQNTQFKLADMATRIEAAQMLVYKAAM 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +    K  S EAA A       K +  + A AV  E ++  GG GYI E  + R  R++ 
Sbjct: 310 AKANQKVYSVEAAKA-------KLFAAETAMAVTTEVVQLFGGYGYIREYDVERMMRDAK 362

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     + +   L K
Sbjct: 363 ITEIYEGTSEVQRMVISGALLK 384


>gi|300705170|ref|YP_003746773.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299072834|emb|CBJ44190.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
          Length = 595

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/486 (18%), Positives = 179/486 (36%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPTGFKEAYKQYVEGG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  +          I  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPALGCDPEYGGQGLPI--LINNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDALKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S  +  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTRAEPLADGAYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISAGEHDLSENIVHLVLARLPDAPPGTKGISLFVVPKFIPDAAGNPGERNGVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   +  +    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA+ R                  +I  P ++R +           A ++ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDREL 376

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +  +R E A    ++ P+ K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHPDESARKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   I++D +      +
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGARMKKFGKIVQDFVEAEGTSE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFI 489


>gi|254482834|ref|ZP_05096071.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036915|gb|EEB77585.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 389

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 135/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    + R+    GL        +    +    H +    +   +   
Sbjct: 33  PRAAEIDQNNEFPM--DMWRKFGDLGLLGMTVSEEYGGSNIGYLGHVVAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHKNGNEAQKQKYLPKLCSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLKAEKRGDKYVLNGNKMWITNGPDANTYVIYAKTDPDGGSRGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  +  ++S   
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELLFEDCEVPAENILGEEGRGVAVLMSGLDYERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M   + + + Y   R   G  + +  +++  +AD+   ++A+ A  + +A + D  +
Sbjct: 258 VGIMMACMDQVVPYIHDRKQFGQSIGEFQLVQGKVADMYTLLSASRAFLYAVARACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  +A++ +GG+GYI +    R  R++    I  
Sbjct: 318 ESRKDAA-------AVILFTAEKATQMALDAIQLLGGNGYINDFPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEVRRMLIGREL 384


>gi|156552988|ref|XP_001604014.1| PREDICTED: similar to GA17761-PA [Nasonia vitripennis]
          Length = 475

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 127/359 (35%), Gaps = 23/359 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL++   +GL        ++               +L   L    L        ++V +
Sbjct: 134 DLLKKLFENGLMGMEVPVEYDGTG----------CNFLTTILAVEELSKIDGAVGALVDI 183

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     +   K  + E       P      A    LTE   G+D  ++ +  +K    
Sbjct: 184 HNT---LVNSLIKKVANEEQKKKYLPKLANEYAGSFCLTEPGAGSDAFSLKTVAKKDGSD 240

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +S ++  F++ A  E   G   +     +    G+   + ++K+G R++
Sbjct: 241 YVINGSKCWISNSDIAGVFLVFANAEPSKGYRGITTFFVERDTPGVTVAKPEDKLGIRAS 300

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F N         G                 +      +   + SL   I Y   
Sbjct: 301 GTCMIHFENVRVPETNICGQFGHGYKYAAGFLNEGRIGIGAQMIGIAQGSLDATIPYTLE 360

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +   ++  IA I +++ AA  L +  A   D  K   +EAA A       K
Sbjct: 361 RKQFGKSIYEFQSLQHQIAQIVVEVEAARLLVYNAARLVDAKKDVMKEAAMA-------K 413

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y+  ++A  V ++ ++ +GG G+  +    + YR++   +I  G+ N  +  +   ++K
Sbjct: 414 YYASEIAQRVTSKCVDFMGGVGFTTDYPQEKFYRDAKIGTIYEGTSNMQLSTIAKAIKK 472


>gi|110798756|ref|YP_694556.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
 gi|110673403|gb|ABG82390.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124]
          Length = 378

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 136/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P      ++    G+    +   +          + A           
Sbjct: 26  PFAIENDENSTFPI--EAYKKLGELGVIGLPYSTEYGGTGGDYLSYVLAIEEISKVDASM 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S + +  +      +  + K + P I S                    GLTE   G
Sbjct: 84  GIAVSVTTSLCAGGISNASEELKKKYLPDILSG-------------KKLGSFGLTEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + +  +K  D         +  ++P+S  FI+ A  +   G   +   + +    
Sbjct: 131 SDAGGVITVAEKKGDNYILNGAKCFITNAPLSGTFIVFALTDRTKGPKGLSAFIVEKDFP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           G+   ++++K G +S    E+ F++        +       +  KI +  LD   + V+ 
Sbjct: 191 GISIGKIEDKCGIKSAQVSEVLFNDCVVPASNLVGKED---DGFKIAMKTLDGGRIGVAA 247

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +AE     A  Y + R   G  L  Q  +   +A++A++I  A  + ++ A    E
Sbjct: 248 QGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYMLYKAAMDKQE 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  S  AA A       K  C   A  V  EA++ +GG+GY+ E  + R  R++    I
Sbjct: 308 GKPYSVSAAKA-------KLVCTDAAMHVTTEAIQMLGGNGYMREYQLERMMRDAKITQI 360

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 361 YEGTNEIQKLIISGSLFR 378


>gi|330805830|ref|XP_003290880.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum]
 gi|325078965|gb|EGC32589.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum]
          Length = 625

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/550 (23%), Positives = 231/550 (42%), Gaps = 69/550 (12%)

Query: 25  LNQPPLFIGMNAYSSDS-LLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANY 79
             Q    +G N +  D+ LL AL    P    + +  +L   G+ V++    EL R +  
Sbjct: 19  FQQQSPLLG-NQFLEDTELLKALKRVLPLEVLNEIKPDLTQFGDRVVND-ILELGRASEN 76

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L      G R DK+    +W+ L      +GL    ++R ++   R      +  +
Sbjct: 77  NPPKLLQLDAWGRRIDKIVVDESWNKLKDIGCKEGLVSIGYERKYKEFSR----IYQYIK 132

Query: 140 LYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +YL A   A      S+T   A ++ L  T  + KD      +R+               
Sbjct: 133 IYLFACSSAVFDCPLSMTDGGARLLELHGTDSMKKDELQHFITRD---------PSQFWT 183

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-----------IYCLSGHKWFLSSPMSDAFIML 246
            G  +TEK GG+D++   +  Q++++             + +SG+K+F S+  SD+ ++L
Sbjct: 184 SGQWMTEKTGGSDVSGSETIAQELTNPSEYPKLLSTPPTHKVSGYKYFTSATTSDSSMIL 243

Query: 247 AQVEGRVGCFLVPR-------LLEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTF 295
           A+   + G   V         L++  +PNG    +   +LKNK G ++  T ELE   T 
Sbjct: 244 ARDVDKDGNGGVSGSRGLSVYLIKLRTPNGELDRIRVHKLKNKFGTKAVPTAELELMGTP 303

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G        +  +  +  + + I SVS MR  +A    +A RR V G +L D  + 
Sbjct: 304 AVRIGPKGRGVPVIASILNITRIHNVIHSVSTMRRCIAIGRDFAHRRTVFGKLLKDNLLY 363

Query: 356 KRAIADIALDIAAATALSFRLANS--FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
              +A++ L+  A       ++      E  +  E  +  RI+ P++K +  K +  V +
Sbjct: 364 LSTLAEMELEFRAGLHFLLDVSLLLGKSECCATPETDSLLRILTPLSKLYTAKQSIWVSS 423

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           E +E +GG+GY+E+  + R +R++   SI  G+ N + +DV   L K T   E  F +++
Sbjct: 424 EGIELLGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDVWRSL-KNTKTIECFFKSIQ 482

Query: 474 ----------QDLGSSGKKVITILRDSIS------------LCKEDKGLARFLTEKIALA 511
                     Q+L     K    + DSI+              +  +  AR     ++  
Sbjct: 483 DRVSNTSGVNQNLLPLFNKATKSINDSIAVIRSVIDKVMNGDMEYAESNARRFAYLLSQT 542

Query: 512 SSAAALYRAG 521
             A+ L+   
Sbjct: 543 YMASLLFEHA 552


>gi|25453061|sp|Q9FS87|IVD2_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 2, mitochondrial;
           Short=IVD 2; Flags: Precursor
 gi|10129810|emb|CAC08234.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum]
          Length = 401

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 140/396 (35%), Gaps = 30/396 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ A  N        P  E+ D+  + P    L +      L      +      + 
Sbjct: 32  ESVAQFAQEN------IAPHAEKIDRTNYFPQDVNLWKLMGDFNLLGITVPEEYGGLGLG 85

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + +    + +    T    + + PK+ S E+      
Sbjct: 86  YLYHCIAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQKYLPKLISGEH------ 139

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +  ++  G        W  + P +   ++ A+ 
Sbjct: 140 -------VGALAMSEPDAGSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTAQTLVVYAKT 192

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 193 DVTASSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQVGKGV 252

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +     L  L  A   V  M+  L   + Y ++R   G  + +   ++  +AD+   +
Sbjct: 253 YVLMSGLDLERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSM 312

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A   D     +++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 313 QSSRSYLYSVARECDSGTINTKDCAGVILSAA-------ERATQVALQAIQCLGGNGYVN 365

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E    R  R++    I  G+     + +   L K  
Sbjct: 366 EYPTGRFLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 401


>gi|330890782|gb|EGH23443.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 387

 Score =  278 bits (712), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|71278527|ref|YP_271124.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71144267|gb|AAZ24740.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 602

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 86/494 (17%), Positives = 176/494 (35%), Gaps = 74/494 (14%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERW-----DKVEFH-PAWHALLRRSIHDGLHCSIWD 121
              QE A++A     +L      G+       D V    P +          G      D
Sbjct: 42  AILQECAKIAEQ---ELDPIARQGDEIGVSFKDGVVTTAPGYKEAFNTYAEGGWTALGGD 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            ++  +   +        +   A +        +  +A  +A   +  + + +  ++++ 
Sbjct: 99  VNYGGMGMPKMLTAMHEEMLCSADISFALYPVLTAGAALSLAKHGSDELKERYLTRMYAG 158

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           ++             +  + LTE   G+D+  I ++     DG Y ++G+K F++    D
Sbjct: 159 DW-------------SASMCLTESHSGSDLGIIRTKAIPQDDGSYSITGNKIFITGGEHD 205

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++         +  FLVP+   +     G  N +    +++K+G  ++A
Sbjct: 206 LTENIVHLVLAKLPDAPAGPRGISLFLVPKFNVNDDETLGEYNNVSCGSIEHKMGIHASA 265

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + F ++ GFL+G+LN     +  M     +   I  +S    S   A+ YA+ R   
Sbjct: 266 TCVMNFDDSKGFLIGELNKGLACMFTMMNFERIGVGIQGLSAAVRSYQNALEYAKDRLQ- 324

Query: 346 GGI-----------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EA 383
           G                   ++    ++R + ++      + ALS  ++   D     E 
Sbjct: 325 GRALDSKTNGVKNPDQEADSIMVHGDVRRMLLNMKALNEGSRALSSYISMQLDYATYAEG 384

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + + +    A +M PI K +   +         +  GG GYI E    +  R++    I 
Sbjct: 385 EEQVKGETLAALMTPIAKAFFTDLGFENTVAGQQVFGGHGYIREWGQEQLVRDARITQIY 444

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     +D+             L   +    G+  K     +   I  C  D+ ++ F
Sbjct: 445 EGTNGIQAMDL-------------LMRKVAGSKGAMLKVFTDEVNTFIESCSHDQAMSEF 491

Query: 504 LTEKIALASSAAAL 517
           +T   A  +    L
Sbjct: 492 ITPLAAAVTDLTEL 505


>gi|77459878|ref|YP_349385.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
 gi|77383881|gb|ABA75394.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 387

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   L R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDSDNLFPA--DLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGNHEQKAKYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRFVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V+ +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + +  +
Sbjct: 256 TGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACERNE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYTAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|330809780|ref|YP_004354242.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377888|gb|AEA69238.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 375

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 126/374 (33%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     +      G    +    +                        
Sbjct: 24  PFAAEWDREHRFP--REAIDEMAELGFFGMLVPEQWGGCDTGYLAYAMTLEEVAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L          +   + S              ++     LTE + 
Sbjct: 82  STIMSVHNSVGCVPILKFGNDEQKAKFLTPLASG-------------AMLGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLKTRARLEGDHYVLNGCKQFITSGQNAGVVIVFAVTDPSAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F +    +   L     G    +  L    +  A  +
Sbjct: 189 PGYSVARVEDKLGQHASDTCQILFEDLKVPVGNRLGEEGEGYKIALANLEGGRVGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YAR R   G  +I+   +   +AD+A  IA A  +    A   D  +
Sbjct: 249 VGMARAAFEAARDYARERSSFGKPIIEHQAVAFRLADMATQIAVARQMVHYAAALRDSGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAEKVCSMALQTLGGYGYLNDFPLERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDIQRMVISRNL 375


>gi|114047542|ref|YP_738092.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113888984|gb|ABI43035.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 585

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 204/558 (36%), Gaps = 59/558 (10%)

Query: 34  MNAYSSD----SLLVALIANFPSVV--HKELELLGE-YVLSCTAQELARM-ANYNTPQLH 85
           MN Y +       L+  + + P+      ++  + +        +E A++ A    P   
Sbjct: 1   MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTAGAILEEAAKISAELIQPLNR 60

Query: 86  AYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           A    G   + ++V     + A+  +    G      +  F  +   +   +    +   
Sbjct: 61  AGDEQGVLHQDNRVITPDGYKAVYDQFSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A        S +  +A  +    +  + + + PK++S E+             A  + +T
Sbjct: 121 ACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW-------------AGAMDMT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE--GRVGCF 256
           E + G+D+  I ++     DG Y +SG K F++    D       ++LA++     +  F
Sbjct: 168 EPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLF 227

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           LVP+   +     G  NG+    +++K+G + +AT  + F    G+L+G+ N     +  
Sbjct: 228 LVPKTTVNADGSLGQANGVTVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFT 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAIA 360
           M     L   I  +   + +   A  YA+ R+     GG         +I    ++R + 
Sbjct: 288 MMNYERLAIGIQGLGSAQAAYQMAADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLL 347

Query: 361 DIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
            I     A  ALS       D AK      +++ A Y  ++ P+ K +           A
Sbjct: 348 TIRAMTEAGRALSVFTGKQLDLAKYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMA 407

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLE 473
            +  GG GYI E  I +  R++    I  G+     +D L     G NL   ++  + L+
Sbjct: 408 QQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELK 467

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
             +    +     +    +       +A  + E     +  A +  + ++ + D F    
Sbjct: 468 AQMRGFTRVDAVKVAAVCARLDALVIVAESVNEH--KVAQPALINASAVDFL-DAFGYTL 524

Query: 534 FLDNCHSTHCMLHGRFNA 551
           +         ML    +A
Sbjct: 525 YGFYW---LAMLDKAVDA 539


>gi|289648710|ref|ZP_06480053.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 387

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ + +     +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGTLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|15596828|ref|NP_250322.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107101063|ref|ZP_01364981.1| hypothetical protein PaerPA_01002093 [Pseudomonas aeruginosa PACS2]
 gi|254234731|ref|ZP_04928054.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719]
 gi|9947598|gb|AAG05020.1|AE004590_11 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126166662|gb|EAZ52173.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719]
          Length = 384

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 133/365 (36%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++  A  L   +      L + +   +  + 
Sbjct: 39  AIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P++ S E             +     LTE   G+D A++ +   +  +
Sbjct: 99  IDGTEEQKRRYLPRLASGE-------------LLSSFCLTEPDSGSDAASLKTTAVRDGE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+ +  + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|325105524|ref|YP_004275178.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974372|gb|ADY53356.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 380

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 130/373 (34%), Gaps = 32/373 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ ++ P     +++    G    + D  +          + A          A  +MS 
Sbjct: 32  DEKQYFPT--EFVKKMGELGFMGMMVDPIYGGAGLDAVSYVLALEELAKIDASAAVIMSA 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           + +     +    T    + +               P+          L+E   G+D  +
Sbjct: 90  NNSLVCFGLEKYGTEAQKRKYL-------------FPLASGQQLGAFALSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +    + D         W  +   +  +I+ AQ +   G   +  L+ +    G    
Sbjct: 137 QHTTAIDMGDHYLLNGTKNWITNGGTASIYIVFAQTDVAKGYHGINALIIEKGMEGFSIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSL 332
             +NK+G RS+ T  L F++         N         +  +  LD   + ++   + +
Sbjct: 197 PKENKLGIRSSDTHSLMFTDVKVP---KENRLGEDGFGFRLAMETLDGGRIGIAAQALGI 253

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A      A +Y++ R   G  + +   +   +AD+   I AA  L ++ A   D+     
Sbjct: 254 AAGAYELARNYSKERKSFGKPICEHQAIAFKLADMETQIEAARLLVYKSAWLKDQKMPYG 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           + +A       I K +  ++A     EA++  GG GY++E  + R  R++    I  G+ 
Sbjct: 314 KSSA-------IAKLYASEVAMQTTIEAVQVHGGYGYVKEYHVERLMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               + +   L K
Sbjct: 367 EIQKIVISRDLLK 379


>gi|120555036|ref|YP_959387.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
 gi|120324885|gb|ABM19200.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8]
          Length = 388

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 142/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  DK    P    L R+    GL        +        AH I    +   +   
Sbjct: 33  PRAEEIDKNNEFPM--DLWRKLGDMGLLGITVSEEYGGSDMGYVAHVIAMEEISRASASA 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ + E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHRNGTEEQKQKYLPKLVTGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   D         W  + P +  +++ A+ + + G   V   + +   
Sbjct: 138 GSDVISMKLHARDEGDHYVLNGNKMWITNGPDAHTYVIYAKTDPKGGSKGVTAFIVERDY 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +         NV  G     K+L+  LD   + +S
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFQDCKVP---KENVLGGVGNGAKVLMSGLDYERLVLS 254

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M+ ++   + Y R R   G  + +  +++  +AD+   +  A +  + +A S D
Sbjct: 255 GGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVADMYTWMNTAKSYVYMVAQSAD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  +MA  +  +A++ +GG+GYI E    R  R++    
Sbjct: 315 RGETTRKDAAGA-------ILYSAEMATKLALDAIQLLGGNGYINEYPTGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|325291892|ref|YP_004277756.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325059745|gb|ADY63436.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 598

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/547 (19%), Positives = 197/547 (36%), Gaps = 100/547 (18%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLH 116
            ++     E A++A     +L      G+     R D   V     +          G  
Sbjct: 36  DMIEAITGEAAKLAEE---RLFPLNLSGDQQGCKRADDGSVSVPDGFKEAYDAYCEGGWI 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                  F        + + AA    M+      +M P +T  ++ A+    T    + +
Sbjct: 93  GLAVPPEFGGQGLP--YTLHAAIGEYMSSANLSLMMYPGLTQGAIAAVLVHGTQEQKETY 150

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+    +  T             + LTE   GTD+  + ++     DG Y +SG K F
Sbjct: 151 LPKMVEGTWSGT-------------MNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIF 197

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S+           +++A++EG       +  F+VP+ L       G  NG+    +++K
Sbjct: 198 ISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDGSLGERNGVTCGAIEHK 257

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   NAT  + + +  G+LLG  N     +  M     L   +  +S   ++   A+ Y
Sbjct: 258 MGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQGLSVGEIAYQNAVEY 317

Query: 339 ARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           AR R   G               +I  P ++R +  I     A  A     A   D A  
Sbjct: 318 ARERIQ-GRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAFLLWTALQSDIAHR 376

Query: 386 RSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++E           ++ PI K             A +  GG GYIEE  ++++ R++  
Sbjct: 377 STDEKERQTADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARI 436

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDK 498
             I  G+     LD++                  + LG + G+ V+ + ++    C+E+ 
Sbjct: 437 TMIYEGANGIQALDLVG-----------------RKLGMNGGRAVMALFKEIGDFCEEN- 478

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAH 553
                  EK++L +      + G+ND+      F++N     DN         G  +  H
Sbjct: 479 ----RPDEKLSLYTKG---LKKGLNDLQAATMWFMQNAMAKPDNAG------AGSTDYMH 525

Query: 554 IIDSLYL 560
           +   + L
Sbjct: 526 LFGIVVL 532


>gi|215405851|ref|ZP_03418032.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis 02_1987]
 gi|215448144|ref|ZP_03434896.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T85]
 gi|289747639|ref|ZP_06507017.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987]
 gi|289759964|ref|ZP_06519342.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85]
 gi|294995289|ref|ZP_06800980.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis 210]
 gi|289688167|gb|EFD55655.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987]
 gi|289715528|gb|EFD79540.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85]
 gi|326905635|gb|EGE52568.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis W-148]
          Length = 593

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 139/530 (26%), Positives = 227/530 (42%), Gaps = 57/530 (10%)

Query: 33  GMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N Y +D  L  ++A +      +     L  +GE       +  A   + N P+L  Y
Sbjct: 33  GLNWYLTDPTLQFIMAYYLRPDELAFAEPHLTRIGELTGGPVTR-WAEETDRNPPRLERY 91

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G    +V    ++    R  I          R        +      A  YL+ Q +
Sbjct: 92  DRWGHDISRVVLPESFIQSKRAVIEARQAV----RDDAARAGVKPSLALFAADYLLNQAD 147

Query: 148 ---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  L +      S+V     P V +    K+ S E+D                 LTE
Sbjct: 148 IGMACALATGGNMVRSLVTAYAPPDVREFVLGKLNSGEWDGE-----------AAQLLTE 196

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLV 258
           + GG+D+ A+ +   +  D ++ L+G KWF S+   +AF++LA+ EG       V  FLV
Sbjct: 197 RAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVATFLV 255

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---------NVSTGPV 309
            R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                  +
Sbjct: 256 LRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGLTRM 315

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            ++   + L +A  ++   R +L E++ YA +R   GG LID+P+M+R +A++ +D+ AA
Sbjct: 316 MELTNRLRLGTAPFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDVEAA 375

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A+ F    + +  + R      A    P+TK   C++   V ++A+E  GG+GYIE   
Sbjct: 376 LAMVFDGFGAANHRQPRCLPQRIA---VPVTKLKTCRLGITVASDAIEIHGGNGYIETWP 432

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------- 481
           +AR  R++  N+I  G  N + LDV   +E+ T   E L + L   +  S          
Sbjct: 433 VARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARLRDAVSVSDDDDTTRLVS 491

Query: 482 KVITILRDSISL---CKEDKGLARF--LTEKIALASSAAALYRAGMNDIA 526
           + I  L  +I+           AR   L + +    + A L      + A
Sbjct: 492 RRIEDLDAAITAWTKLDRQLAEARLFPLAQFMGDVYAGALLTEQAAWERA 541


>gi|209519037|ref|ZP_03267845.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209500549|gb|EEA00597.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 595

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/492 (19%), Positives = 179/492 (36%), Gaps = 65/492 (13%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFH 100
            A + + P         L    ++   +E  +  +     L+      G  +  D V   
Sbjct: 22  EAELRHMPKHAD-----LDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYAGDGVVTT 76

Query: 101 P-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           P  +    ++ +  G      D  +       A    A    L +  +A  +       A
Sbjct: 77  PKGFKEAYQQYVEAGWPALGCDPQYGGQGLP-AFVNNALYEMLNSANQAWTMYPGLSHGA 135

Query: 160 S-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    TP + + + PK+ +  +  T             + LTE   GTD+  + ++ 
Sbjct: 136 YECLRAHGTPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKA 182

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL----- 262
           +   DG Y +SG K F+SS   D       ++LA++         +  F+VP+ +     
Sbjct: 183 EPNGDGSYSISGTKIFISSGEHDLAENIIHLVLARLPDAPKGTKGISLFIVPKFVPNEAG 242

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           E G  NG+    +++K+G   N+T  +   N  G+++G+ N     +  M     L   +
Sbjct: 243 EPGERNGVKCGSIEHKMGIHGNSTCVINLDNANGWMVGEPNKGLNAMFVMMNAARLGVGM 302

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT 370
            S+    V+   ++ YA+ R                  +I  P ++R +        A  
Sbjct: 303 QSLGLTEVAYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGR 362

Query: 371 ALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A ++  A   D      +   R E A    ++ PI K +    A      AM+  GG G+
Sbjct: 363 AFTYWSALQIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGF 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-----NLFEQLFSTLEQDLG-- 477
           I E  + ++ R++  N I  G+     LD+L     G        F +L +T  +  G  
Sbjct: 423 IAEWGMEQYVRDARINMIYEGTNGIQSLDLLGRKVLGDMGAKLKKFGKLVATFVEAEGIK 482

Query: 478 SSGKKVITILRD 489
              ++ +  L D
Sbjct: 483 PEMQEFVNPLAD 494


>gi|330502345|ref|YP_004379214.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328916631|gb|AEB57462.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 387

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 140/389 (35%), Gaps = 27/389 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    ++RR+   G            +   +             
Sbjct: 22  RELTPHAADWDREHHFPI--EVIRRAAEQGYLALYLREEDGGLGLSRLSSSLIFEQLAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +     ++    +  M+A      +   W P +                       LTE
Sbjct: 80  CVATTAYLTIHNMATWMLASFADQALKDAWLPGLI-------------NGQSLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D A + ++ ++   G Y + G K F+S   S D  I++A+  G  G   +  LL 
Sbjct: 127 PDAGSDAANLRTRARRDG-GDYVIDGSKCFISGAGSTDVLIVMART-GEDGAKGISCLLV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G+ Y R ++K+G ++  T  + F      +   +     G V  M+ L    L+ 
Sbjct: 185 PADAPGVRYGRNEDKMGWKAQPTRTITFEGVRIPVSNRIGPEGEGFVYAMRGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L +++ Y   R   G  L     ++  +AD+  D+ A+  +    A+  
Sbjct: 245 ASCSLGAAQAALEQSLRYVEERKQFGKALSQFQALQFKLADMLTDLTASRQMVRLAAHKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A +   + K +       V  +A++  GG GY+ +  + R  R++  +
Sbjct: 305 DHGHGE------ASLYCAMAKRFATDHCFDVCNQALQLHGGYGYLNDYPLERWVRDARVH 358

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            IL G+   M + +   L     + ++L 
Sbjct: 359 QILEGTNEIMRVIIARRLLVQGGMLDRLL 387


>gi|91977767|ref|YP_570426.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684223|gb|ABE40525.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 381

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 142/377 (37%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ +  P    ++R++   G+               +             
Sbjct: 22  EKIAPHALKWDEDKHLPI--DVIRQAASLGIGGIYIRDDVGGSAMTRFDAALIFESLAEG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +A M+    +    + W P++ S E             +     LTE
Sbjct: 80  CPAVSAFISIHNMAAWMIDSYGSDAQRRQWLPRLCSME-------------LIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   ++   ++    G  G   +  L+ D
Sbjct: 127 PGSGSDAAALRTRAVRDGDD-YVLNGQKQFISGAGANDLYVVMVRTGGDGPGGISTLVVD 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T  + F N    +   LGD  +             L+ A
Sbjct: 186 KDTPGLSFGANERKMGWNAQPTRSVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +A+ Y + R   G  L +   ++  IAD+A ++ AA    +R A + D
Sbjct: 246 ACSLGGAQSALDKALGYMKDRKAFGKRLDEFQALQFRIADMATELEAARTFLWRAAAALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A  +  + K +   +   V  +A++  GG GY+ E  + +  R+   + 
Sbjct: 306 RKDLD------ASKLCAMAKRFGTDVGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 360 ILEGTNEIMRLIVARKL 376


>gi|311693798|gb|ADP96671.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 388

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 140/375 (37%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P    +++ +   G        +   +   +            A    
Sbjct: 26  PHAAKWDNEHIFPV--DMMKEAGEMGFMGMYTPEALGGMGLSRLDTSVIVEELAAACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  MVA   +  + ++  PK+ S E+                  LTE   G
Sbjct: 84  AAFITIHNMATWMVASFASDDLKQEIVPKLASGEW-------------LASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           +D A++ ++  +  D  Y ++G K F+S   + D  +++A+      G   +   +    
Sbjct: 131 SDAASLRTKAVRDGD-SYVINGSKVFISGAGATDILVLMARTGAPDSGYKGISTFVIPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G+ Y + + K+G  S  T  +   N        +     G    MK L    L+ A  
Sbjct: 190 ADGISYGKNEEKMGWHSQPTRMISLENVRIPASNRVGDEGDGFAIAMKGLDGGRLNIATC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +L  A +Y   R   G  L     ++  +AD+A ++ AA  +    A   D A
Sbjct: 250 SLGGAQAALLRARNYMHEREQFGKPLAAFQALQFKLADMATNLVAARQMVRLGAFKLDNA 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A +   + K +       V+ EA++  GG GYI E  + R+ R+   + IL
Sbjct: 310 DPE------ATLHCAMAKRFATDACFEVVNEALQLHGGYGYIREYPLERYLRDLRVHQIL 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M L V   L
Sbjct: 364 EGTNEIMRLIVARRL 378


>gi|148359370|ref|YP_001250577.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|296107417|ref|YP_003619117.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281143|gb|ABQ55231.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|295649318|gb|ADG25165.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 386

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  + L R+    GL        +    +   AH I    +   +   
Sbjct: 30  PLAAQIDEKNTFP--NHLWRKLGEMGLLGITVSEEYGGANMGYLAHAIAMEEISRASASV 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L       + + PK+ S EY                L ++E   
Sbjct: 88  GLSYGAHSNLCVNQIFLNGNNEQKQKYLPKLISGEY-------------IGALAMSESNS 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q +   D         W  + P +D  ++ A+ + + G   +   + +   
Sbjct: 135 GSDVVSMQLQARSAGDKYILDGTKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGM 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         +LG +N     +           A   
Sbjct: 195 PGFKTAQKLDKLGMRGSNTCELVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTILAAGP 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R      + +   ++  +AD+  D+ A  A  + +A + D  +
Sbjct: 255 VGIMQACMDVVLPYVHERKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGR 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  ++++ +GG+GYI E    R  R++    I  
Sbjct: 315 VSRKDAAG-------VILYTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGA 367

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T 
Sbjct: 368 GTSEIRRMLIGRELFKETA 386


>gi|119477415|ref|ZP_01617606.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119449341|gb|EAW30580.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 389

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   + DK    P   AL R+    GL        +    +    H +    +   +   
Sbjct: 33  PLAAQLDKDNEFPM--ALWRKLGDLGLLGMTVSERYGGSDMGYLGHTVALEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIYRNGSDEQREKYLPKLCSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  + P +D +++ A+ + + G   +   + +   
Sbjct: 138 GSDVVSMKLAAKKQGDRYILNGNKMWITNGPDADTYVIYAKTDVKAGPKGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L      V  +   +  +  ++S   
Sbjct: 198 PGFSRSPKLDKLGMRGSNTCELVFQDCEVPEENILGREGEGVRVLMSGLDFERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  + + + Y   R   G  + +  +M+  +AD+  ++ A+ A  + +A + D  +
Sbjct: 258 VGIMQACMDQVVPYIHDRKQFGQSIGEFQLMQGKVADMYTELNASRAYLYAVAKACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  +A++ +GG+GYI +   AR  R++    I  
Sbjct: 318 ESRKDAA-------AVILFTAEKATQMALQAIQALGGNGYINDFPTARLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 371 GTSEIRRMLIGRELFNETA 389


>gi|103488529|ref|YP_618090.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
 gi|98978606|gb|ABF54757.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
          Length = 381

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 141/396 (35%), Gaps = 34/396 (8%)

Query: 70  AQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR   A+  TP           WD+   +P    + + +   G            +
Sbjct: 14  IQDMARKFTADRITP-------FAAEWDEASHYPV--DVWKAAGELGFGAIYVAEESGGI 64

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                    +S    +  M+       +   + P + S       
Sbjct: 65  GLGRLEAALIMEAMAYGCPATSAYISIHNMATWMIDRFGGAEIKARFLPALVSM------ 118

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ +  ++  D  Y L+G K F+S    +   +  
Sbjct: 119 -------DKIASYCLTEPGSGSDAAALKTTAKRDGDH-YVLNGTKQFISGAGYNDIYVCM 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
              G      +  L+ +    GL +   + K+G  ++ T ++ F +    +   +     
Sbjct: 171 VRTGEEKAKGISCLVVEKDTPGLSFGAPEKKLGWNASPTAQVIFEDCRVPVENRVGAEGD 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M  L    L+    S+ G +  L EAI Y R R   G  + D    +  +AD+A 
Sbjct: 231 GFRFAMAGLDGGRLNIGACSLGGAQRCLDEAITYTRDRQQFGQPVADFQNTQFMLADMAT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+ AA AL +  A         +  A      + + K         ++ +A++  GG GY
Sbjct: 291 DLEAARALLYMAAAKV------TANAPDKSRFSAMAKRLATDNGSRIVNDALQLFGGYGY 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +++  I R +R+   +SIL G+   M + V   L +
Sbjct: 345 LKDYPIERFWRDLRVHSILEGTNQVMRMIVGRDLLR 380


>gi|94309053|ref|YP_582263.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93352905|gb|ABF06994.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 376

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 145/395 (36%), Gaps = 33/395 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     Q     P   RWD+ +  P    + +     G +      +       
Sbjct: 7   QEMIRDAVRQFAQ-DVIAPQAARWDRDKTFP--KDVHKELARLGAYGVAVPEALGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+    +    + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMLMAFASDAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  Y L+G K F++S   +D  I++A 
Sbjct: 111 PLAQGDMLGAFCLTEPHVGSDASALRTTATRDGDH-YVLNGVKQFITSGKHADVAIVMAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   L   S  G    RL+ K+G  S+ T ++ F N        L      
Sbjct: 170 TDKAAGKRGISAFLVPTSTPGYIVARLEEKLGQHSSDTAQIVFENCRIPAANMLGEEGAG 229

Query: 309 VEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +    L  L+   + ++   + +       A+ YA+ R   G  L     ++  +AD+A
Sbjct: 230 YK--MALSGLEGGRIGIASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQFRLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I  A  + +  A+  D  +   +EAA A       K +  +MA  V ++A++  GG G
Sbjct: 288 TQIDVARQMVWHAASLKDAGRPCLKEAAMA-------KLFASEMAERVCSDAIQVFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YVTDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|297624543|ref|YP_003705977.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165723|gb|ADI15434.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 381

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 145/404 (35%), Gaps = 32/404 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E+ LS     + R             P     D+    P W  L R+    GL       
Sbjct: 2   EFALSEDLLMMQRTVRDFA--QKEIAPIAAELDRYPRFP-WPTL-RKMGELGLLGMTTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSR 181
            +  +       +        A    G +MS +      M+    T      + PK+ S 
Sbjct: 58  CYGGLGLGTLDYVVMLEEISAADASHGTIMSVTSGLPQTMLVHYGTEAQKARYLPKLASG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                  L+E   G+D AAIT++ +K+  G        W  S   + 
Sbjct: 118 EW-------------IGAFCLSEPHAGSDAAAITTRARKVEGGYVLSGTKAWITSGGEAQ 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+ +   G   V   + D    G+ + + + K+G  +  T  + F + F      
Sbjct: 165 VYLVMAKTDPSAGPRGVSCFVVDKGTPGMHFGKPEEKLGQHAATTTSVIFEDCFVPDGAL 224

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356
             V       +  L  LD   + ++   V +A A   A       R   G  + +   + 
Sbjct: 225 --VGPKGQGLVIALESLDGGRIGIAAQAVGIARAALEAALAYAGERRTFGKPIREHQGVA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  + AA  L+ R A   D     ++EA+ A       K +  + A  V   A+
Sbjct: 283 FKLADMATRVDAARLLTQRAAWLKDHGYRVTQEASMA-------KLFASETASFVTHAAL 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +GG GY ++  + R++R++    I  G+     + +   L +
Sbjct: 336 QVLGGYGYSKDYPVERYFRDARVTEIYEGTSEIQRIVIARQLYR 379


>gi|296137162|ref|YP_003644404.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797284|gb|ADG32074.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 392

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 138/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                  R A  +  +     P     D+ +  P    L R+    GL       +    
Sbjct: 11  GEDIAALREAVRDFAE-QEIAPRATEIDRTDQFPM--DLWRKFGDLGLLGVTVPEADGGT 67

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH +    +   +        + S    + +    +      + PK+ S E+   
Sbjct: 68  GMGYLAHMVALEEISRASASVGLSYGAHSNLCVNQIRRNGSAAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  +  DG        W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADRRGDGFVLNGSKMWITNGPDADVLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPAASSKGITAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPAENVLGHLN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A+++   V  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVKVLMSGLDYERAVLAAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA +L + +  + D        A   R        WC + A  +  E ++  GG+G
Sbjct: 295 TVLQAARSLLYTVGKNLDALGDGH--ARSVRKDCAAVILWCAEKATWMAGEGIQIFGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +  + R +R++    I  G+     + +   L
Sbjct: 353 YINDYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|229590490|ref|YP_002872609.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229362356|emb|CAY49258.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 375

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 132/387 (34%), Gaps = 27/387 (6%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            A  +  Q     P    WD+    P     +      G    +    +           
Sbjct: 12  DAARHFAQ-ERLKPFAAEWDREHRFP--KDAIGEMAELGFFGMLVPEQWGGCDTGYLAYA 68

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            A             +MS   +   +  L     +  + +   + S              
Sbjct: 69  MALEEIAAGDGACSTIMSVHNSVGCVPILTFGNDQQKERFLKPLASG------------- 115

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           ++     LTE + G+D +++ ++ +   D        ++  S   +   I+ A  +   G
Sbjct: 116 AMLGAFALTEPQAGSDASSLKTRARLEGDHYVLNGCKQFITSGQNAGVVIVFAVTDPVAG 175

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK 313
              +   +      G    R+++K+G  ++ T ++ F +    +   L     G    + 
Sbjct: 176 KRGISAFIVPTDSPGYTVARVEDKLGQHASDTCQILFEDVKVPVANRLGEEGEGYKIALA 235

Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    +  A  SV   R +   A  YAR R   G  +I+   +   +AD+A  IA A  
Sbjct: 236 NLEGGRVGIASQSVGMARAAFEAARDYARERESFGKPIIEHQAVAFRLADMATQIAVARQ 295

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +    A   D  K    EA+ A       K +  +MA  V + A++ +GG GY+ +  + 
Sbjct: 296 MVHYAAALRDSGKPALVEASMA-------KLFASEMAEKVCSAALQTLGGYGYLSDFPLE 348

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR+     I  G+ +   + +   L
Sbjct: 349 RIYRDVRVCQIYEGTSDIQRMVISRNL 375


>gi|262376517|ref|ZP_06069746.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308656|gb|EEY89790.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 593

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 82/507 (16%), Positives = 186/507 (36%), Gaps = 62/507 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +    R+    G         +      +   + A  +              +
Sbjct: 73  EVTTPKGFKEAFRQFAEGGWVGLGAPEEWGGQNMPKMLTVLADEMIWSTNPSFMLYPLLT 132

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V +   ++   +    + + PK ++ E+  T             + LTE   GTD+  I 
Sbjct: 133 VGAGMAISDRASQEQKETYLPKFYTGEWSGT-------------MCLTEPHSGTDLGIIK 179

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++ +   DG Y ++G K F++S   D       ++LA+          +  F+VP+ L +
Sbjct: 180 TKAEPNEDGSYNITGTKIFITSGEHDLSENIIHLVLAKTPNAPAGSRGISLFIVPKFLVN 239

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G + +AT  + F    G+++G+ N     +  M     L 
Sbjct: 240 ADGSVGERNAVSAGSIEHKMGIKGSATCVMNFDGAKGYMVGNENEGLAGMFVMMNYERLS 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI-------------LIDQPVMKRAIADIALDI 366
             I  +     +   A  YA  R   G               ++    ++R + ++  + 
Sbjct: 300 MGIQGIGAAEFAYQNAAQYATDRLQ-GRASTGAKSPEKPADSILVHGDVRRMLLNVRANN 358

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            A+ A +  +    D      + ++  +      ++ PI K +    A     EA  C G
Sbjct: 359 EASRAFAVYVGQQLDITKYSTDPEAVRKATDRVALLTPIAKAYLTDKALDSALEAQMCFG 418

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGS 478
           G GYI E  + +  R+   + I  G+     +D++             +  + + ++   
Sbjct: 419 GHGYIREWGMEQCIRDLRISQIYEGTNGVQAIDLIGRKTTKCNGTYIAEYIAEI-REFAQ 477

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMNDIADVFL---- 530
           +    +TI   ++  C++ + + +F+ E+  L    A++ A  Y   +  ++ V++    
Sbjct: 478 NLDDSLTIKTATLEACQQLEDITKFIVEQSKLNPDFANAIAVDYLHAVGLLSFVYMYAQI 537

Query: 531 --ENRFLDNCHSTHCMLHGRFNAAHII 555
                  D+ +  + ++   +  A I+
Sbjct: 538 SKAAAAKDDSYFQNKLVLANYYVAKIL 564


>gi|325479865|gb|EGC82950.1| putative butyryl-CoA dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 561

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 80/422 (18%), Positives = 152/422 (36%), Gaps = 40/422 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ +  P    +++     GL    + + +        H   A           G + S 
Sbjct: 32  DQSKEFP--KEIVKEMGEMGLMGIPFPKEYGGAGLTNQHYAIAVEELSRVDGGVGVICSA 89

Query: 155 SVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +     +         + +   + + E                G GLTE+  G+D A 
Sbjct: 90  HTSLGTWGLNEFGNEEQKEKYLRPLLTGE-------------SIGGFGLTEENAGSDSAG 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +      D  Y L+G K F+++ P +  +++ A      G   +   + D    G  +
Sbjct: 137 TETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHGISMFIVDKDFEGFTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               +K+G RS+ T EL F +        L     G    M I   LD   + ++   + 
Sbjct: 196 SEPYDKLGIRSSVTAELHFKDVKVPKENLLGEEGKGFKYAMMI---LDGGRIGIASQALG 252

Query: 332 LAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A+  + + +     R   G  +         +AD+A ++ AA  L +  A   D     
Sbjct: 253 IAQGAYESAKEYGLAREQFGEAVARMQHNAFILADMATELKAARLLIYDAAKKKDAHVPY 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             +AA A       K +   MA  + ++A++  GGSG+I+   + R+YR+S    I  G+
Sbjct: 313 GMDAAMA-------KLYASDMAEKLTSKALQLYGGSGFIKGVDVERYYRDSKITQIYEGT 365

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              M L +   +       E      ++     G + + I +       ++K  A+ L E
Sbjct: 366 NEIMRLVISGYIFPRVAKKEAKKDAPKKKQSQVGDRKLEIFK------GDEKEAAKKLVE 419

Query: 507 KI 508
            +
Sbjct: 420 AL 421


>gi|322418810|ref|YP_004198033.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320125197|gb|ADW12757.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 379

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 136/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P   +L+++    G   S     ++       ++ I    +       
Sbjct: 26  PIAMKIDEEHMIPD--SLVKKMSEMGFLGSYLPEEYDGAGLDMLSYAIVVEEVSKACGSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    K W P +                       LTE   
Sbjct: 84  GVLISAHTSLACGPIYTFGTEAQKKKWLPAL-------------NTGRTIGCFLLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  AIT+  ++  D         +  +       ++ A  +  +    +   + D   
Sbjct: 131 GSDAGAITTTYRRDGDHFVVNGSKIFITNGGYKGTGVLFASFDKSLKHKGISAFIIDLQS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G+   + +NK+G R + T           +    N+     +  KI +  L+   + ++
Sbjct: 191 PGVEILKNENKMGIRGSYTTAFALDGVRIPV---ENLLGEEGQGFKIAMDTLNGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +AE     A+ Y++ R   G  + +   ++  +AD+   I  +  ++++ A   D
Sbjct: 248 SQALGIAEGAFERALAYSKERKQFGHPICELQAIQFKLADMYTRIETSKLMTYKAACLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ + E+A  +++A     +  K       EA++  GG G+I +  + R YR++    
Sbjct: 308 AKKNYTAESAMCKLLASEAATYVTK-------EAIQIHGGYGFICDYEVERMYRDAKITE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +  +L
Sbjct: 361 IYEGTNEVQRVVISKIL 377


>gi|222112221|ref|YP_002554485.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731665|gb|ACM34485.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 376

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/394 (21%), Positives = 149/394 (37%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   RWDK    P       R  H GL       ++   V
Sbjct: 5   QDQEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAALG---AYGICV 53

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            +         L L   LE         ++A  V       +   +      R++     
Sbjct: 54  PEDLGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDW----L 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLA 247
            P+ +  +     LTE   G+D +A+ +   K  +  Y ++G K F++S  +    I++A
Sbjct: 110 TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKNGHVAIVIA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G   +   L   +  G    RL++K+G  S+ T ++ F +       L+G    
Sbjct: 169 VTDKGAGKKGMSAFLVPTNTPGYVVARLEDKLGQHSSDTAQINFDHCRIPAENLIGAEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  SV   R +   A+ Y++ R   G  + +   +   +AD A 
Sbjct: 229 GYKIALGALEGGRIGIAAQSVGMARSAFDAALAYSKERESFGQPIFNHQAVGFRLADCAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +  A   D  +   +EAA A       K +  +MA  V + A++ +GG G 
Sbjct: 289 QIEAARQLIWHAAALRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGV 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VNDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|52842051|ref|YP_095850.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54297736|ref|YP_124105.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris]
 gi|52629162|gb|AAU27903.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53751521|emb|CAH12939.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris]
          Length = 389

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  + L R+    GL        +    +   AH I    +   +   
Sbjct: 33  PLAAQIDEKNTFP--NHLWRKLGEMGLLGITVSEEYGGANMGYLAHAIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L       + + PK+ S EY                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIFLNGNNEQKQKYLPKLISGEY-------------IGALAMSESNS 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q +   D         W  + P +D  ++ A+ + + G   +   + +   
Sbjct: 138 GSDVVSMQLQARSAGDKYILDGTKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGM 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         +LG +N     +           A   
Sbjct: 198 PGFKTAQKLDKLGMRGSNTCELVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTILAAGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R      + +   ++  +AD+  D+ A  A  + +A + D  +
Sbjct: 258 VGIMQACMDVVLPYVHERKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  ++++ +GG+GYI E    R  R++    I  
Sbjct: 318 VSRKDAAG-------VILYTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T 
Sbjct: 371 GTSEIRRMLIGRELFKETA 389


>gi|317121885|ref|YP_004101888.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591865|gb|ADU51161.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 379

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 127/386 (32%), Gaps = 33/386 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A    P        G         PA     R     G+    +                
Sbjct: 21  ARRVAPGAAERDRTGR-------FPA--EQFRELGELGVLGLPFPEEVGGSGGDTVSFAI 71

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           A      A       ++  V+       L  +      W              AP  +  
Sbjct: 72  AIEEIARACASTALTVAAHVSLGCTPLYLFGSDEQKARWL-------------APALRGE 118

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+  AAI ++  +  D         +  +   +D  ++ A  +   G 
Sbjct: 119 YVAAFGLTEPEVGSHTAAIRTRAVQDGDAWVIHGTKAFITNGSRADYVVVAAVTDPERGR 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
             +  +L      G    R   K+G  ++ T EL F      L   +     G  + ++ 
Sbjct: 179 EGISNILVPRDAPGWRAVRRYEKMGLHASDTAELVFDGCRVPLDHLVGERGKGHAQFLRT 238

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +    +SV   +  L  A+ YAR R   G  +     ++  +AD+A ++ AA  L
Sbjct: 239 LDGGRIGIGALSVGIAQACLDAALEYARYRRQFGRPISKFQAIQFKLADMATELEAARLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R A   D  +    EAA A       K +  ++A     EA++  GG+GY+ +  + R
Sbjct: 299 VYRAAWLRDRGRPYRREAAMA-------KLFASELAVRAALEAIQIHGGAGYVRDYPVER 351

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           + R++    I  G+     L +   L
Sbjct: 352 YLRDAKLMEIGEGTSEIQRLVIAREL 377


>gi|169794563|ref|YP_001712356.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213158866|ref|YP_002320864.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482151|ref|YP_002324333.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260556995|ref|ZP_05829212.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|332856626|ref|ZP_08436235.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868656|ref|ZP_08438303.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147490|emb|CAM85351.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|193078500|gb|ABO13508.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
 gi|213058026|gb|ACJ42928.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988651|gb|ACJ58950.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260409601|gb|EEX02902.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           baumannii ATCC 19606]
 gi|332727019|gb|EGJ58509.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733228|gb|EGJ64423.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 607

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 178/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AA+           PI K +  ++        M
Sbjct: 357 AEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +  +  + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|241203347|ref|YP_002974443.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857237|gb|ACS54904.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 592

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/545 (19%), Positives = 197/545 (36%), Gaps = 82/545 (15%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGER-WD-KVEFHPAWHALLRRSIHDG 114
           L  LGE ++     E  R A      L       G R  D +V     W  L R  I  G
Sbjct: 28  LGDLGEDLVDAILAEAGRFATEEVAPLADIGDRQGARLIDGEVRLPDGWRDLYRHWIAGG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
            +      +F        H +  A L +         ++P++T  ++ A+    +  +  
Sbjct: 88  WNGLTAPEAFGGQALP--HMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKD 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T             + LTE   G+D+  + ++ ++  DG Y L G K
Sbjct: 146 TYLEKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQK 192

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    DA      ++LA++         +  FLVP+ L +     G  N L    L+
Sbjct: 193 IFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLE 252

Query: 277 NKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +K+G   + T  + + +          G+L+G+ N     +  M     L   +  V+  
Sbjct: 253 HKLGIHGSPTCTMIYGDGKFGSEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIA 312

Query: 329 RVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +A+ YAR R               +++ P + R +  +      A A+S+  A++
Sbjct: 313 EAATQKALAYARERTQGRAPGSGSAGMSPIVEHPDVARMLLTMKALTQGARAISYVCAHA 372

Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            D       S       A ++ PI K +       V +  ++  GG G+IEE   AR+ R
Sbjct: 373 IDMSHRAGDSSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARYLR 432

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-- 491
           ++    I  G+       L    L   G +  +   + L +      +  +    ++   
Sbjct: 433 DARIAPIYEGTNGIQAIDLVTRKLPLSGGDQVKGFIAELREIADDVRRSNLDGFGETAVR 492

Query: 492 --SLCKEDKGLARFLTEKIA-------------------LASSAAALYRAGMNDIADVFL 530
             +   + +    +L + +A                   L  +   L + G+ + AD   
Sbjct: 493 LDAAIVDLEQATAWLMKTLAENSTAEALSGATPYQRLFGLVLTGCYLAKGGLAEAADGAG 552

Query: 531 ENRFL 535
           ENR  
Sbjct: 553 ENRIA 557


>gi|302186185|ref|ZP_07262858.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae
           642]
          Length = 387

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    PA   + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPA--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +       +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLEKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L +    V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGMLDDGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|302130683|ref|ZP_07256673.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 592

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/493 (18%), Positives = 175/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGDPVFGGIGMPKIVSAQVEEMINSASLAFGLYAMLTSGACVSINTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGMIRTKAEPQTDGAYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G+ N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSLGARNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAVDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R      A ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLAALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q + +S   +    R   +  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFIDTSDSSLGEFTRPLTAAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|23499979|ref|NP_699419.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161620297|ref|YP_001594183.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260568457|ref|ZP_05838926.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|23463561|gb|AAN33424.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161337108|gb|ABX63412.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260155122|gb|EEW90203.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 384

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|20150494|pdb|1JQI|A Chain A, Crystal Structure Of Rat Short Chain Acyl-Coa
           Dehydrogenase Complexed With Acetoacetyl-Coa
 gi|20150495|pdb|1JQI|B Chain B, Crystal Structure Of Rat Short Chain Acyl-Coa
           Dehydrogenase Complexed With Acetoacetyl-Coa
          Length = 388

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 142/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   + +++    GL                     A           
Sbjct: 31  PIAAQLDKEHLFPT--SQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCAST 88

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   + +  + W               P           L+E   
Sbjct: 89  GVIMSVNNSLYLGPILKFGSSQQKQQWI-------------TPFTNGDKIGCFALSEPGN 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  +S  + A ++ A  +       +   L     
Sbjct: 136 GSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPT 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 196 PGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMQTLDMGRIGIA 252

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA  RH  G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 253 SQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++E+A A++ A        + A A+  +A++ +GG GY+ E    R+YR++    
Sbjct: 313 NKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERYYRDARITE 365

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 366 IYEGTSEIQRLVIAGHLLR 384


>gi|225628681|ref|ZP_03786715.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254699511|ref|ZP_05161339.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254706235|ref|ZP_05168063.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254711472|ref|ZP_05173283.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256029898|ref|ZP_05443512.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256158067|ref|ZP_05455985.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256252978|ref|ZP_05458514.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167001|ref|ZP_05753812.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261220071|ref|ZP_05934352.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261313676|ref|ZP_05952873.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261319081|ref|ZP_05958278.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261749966|ref|ZP_05993675.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261756388|ref|ZP_06000097.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986915|ref|ZP_06099472.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265996581|ref|ZP_06109138.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|306845537|ref|ZP_07478106.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|225616527|gb|EEH13575.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|260918655|gb|EEX85308.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261298304|gb|EEY01801.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261302702|gb|EEY06199.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736372|gb|EEY24368.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261739719|gb|EEY27645.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|262550878|gb|EEZ07039.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264659112|gb|EEZ29373.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|306273858|gb|EFM55685.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 384

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|330501899|ref|YP_004378768.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328916185|gb|AEB57016.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 379

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 133/381 (34%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P  H +   G   D+        AL  ++   G+ CS     +  +     +        
Sbjct: 28  PHHHQWEKDGH-IDR--------ALWNKAGEAGMLCSHIPEEYGGMAADFLYSTVVIEEI 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               L        S   A  +    +    + + PK+ S E                 + 
Sbjct: 79  GRLGLTGIGFSLHSDIVAPYILHYGSEVQKQHYLPKLVSGEM-------------VTAIA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+  + +      D  Y ++G K F+++   +D  I++A+ + + G      
Sbjct: 126 MTEPGAGSDLQGVKTTAVLDGDE-YVINGSKTFITNGWLADLVIVVAKTDPKAGAKGTSL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IY 317
            L + +  G    +   K+G ++  T EL F +        L     G    M+ L    
Sbjct: 185 FLVEANTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQELPQER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L   I +++    +L   + Y R R   G  + D    +  +A++A +I        R  
Sbjct: 245 LTVGIGALASAEAALKWTLDYTRERKAFGKAVADFQNTRFKLAEMATEIQVGRVFIDRCL 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + K            A + KYW   +   V+ E ++  GG G++ E  IAR + ++
Sbjct: 305 ELHLQGK-------LDVPTAAMLKYWTTDLQCKVLDECVQLHGGYGFMWEYPIARAWADA 357

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M   +   L
Sbjct: 358 RVQRIYAGTNEIMKEIISRSL 378


>gi|169632319|ref|YP_001706055.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|184159630|ref|YP_001847969.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|239503267|ref|ZP_04662577.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|332876115|ref|ZP_08443899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169151111|emb|CAO99775.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
 gi|183211224|gb|ACC58622.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509540|gb|ADX04994.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519560|gb|ADX93941.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735733|gb|EGJ66776.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 607

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 178/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTAEGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AA+           PI K +  ++        M
Sbjct: 357 AEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +  +  + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|299067968|emb|CBJ39182.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CMR15]
          Length = 595

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 90/486 (18%), Positives = 179/486 (36%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFRQAYKQYVEGG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  F          +  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPALGCDPEFGGQGLPI--LVNNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPLADGAYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG+    ++
Sbjct: 197 IFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDAAGNPGERNGVKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   +  +    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +I  P ++R +           A ++ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDREL 376

Query: 385 SRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S  +E      A    ++ P+ K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   ++ + +     ++
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGAKMKKFGKLVENFVEAEGTNE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFV 489


>gi|295675288|ref|YP_003603812.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435131|gb|ADG14301.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 376

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 137/379 (36%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P   +WD+    P    + R+    G +  +   ++                    
Sbjct: 20  EAITPYAAQWDRERTFP--RDVHRQLAELGAYGVLVPDAYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        +DW               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLTYGNDAQKRDWL-------------TPLARGEMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +     Y L+G K F++S  + D  I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTATRDG-AAYVLNGVKQFITSGKNGDVAIVMAVTDKTAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
              S  G    R+++K+G  S+ T ++ F         L+G                 + 
Sbjct: 184 VPTSTPGYVVARVEDKLGQHSSDTAQIVFEECRVPAANLIGAEGEGYRIALSGLEGGRIG 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  A+ 
Sbjct: 244 IAAQSVGMARAAFEAALTYAKERESFGAPLFSHQAVQFRLADMATQLEAARQLIWHAASL 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+   
Sbjct: 304 KDTGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRV 356

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+ +   + +   L
Sbjct: 357 CQIYEGTSDIQKILIARAL 375


>gi|183985329|ref|YP_001853620.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M]
 gi|183178655|gb|ACC43765.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M]
          Length = 598

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 138/557 (24%), Positives = 235/557 (42%), Gaps = 71/557 (12%)

Query: 32  IGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           +G+N Y +D  L + +A +      +VV   L   GE +    A+  A   + + P+L  
Sbjct: 36  VGLNWYLTDPTLRSTVAYYLQPDELAVVEPHLIRAGELMGGAVAR-WAEETDRDPPRLQR 94

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    ++    ++    R  +      ++ D +    +R        A  YL+ Q 
Sbjct: 95  YDRWGHDVSRIVMPASFTQSKRAVLDA--QAALRDEARGAGMRPT--VALFAASYLLNQA 150

Query: 147 EAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           + G   +    +  +   VA      V      K  S E+                  LT
Sbjct: 151 DIGMGCALGTGAGMVQSLVAAFAPADVRDHVLAKFDSGEWAGE-----------TAQLLT 199

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFL 257
           E+ GG+D+ A+ +   +  D  + L+G KWF S+    AF++LA+ EG       V  FL
Sbjct: 200 ERTGGSDLGALETTATRDGD-SWRLNGFKWFASNCAGQAFVVLAKPEGAPDTTRGVANFL 258

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL------------NVS 305
           V R   DGS NG+  +RLK+K+G RS A+ E+EF +   FLL                  
Sbjct: 259 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSAEPSGPQALAGPSGGRG 318

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + ++     L  A  ++   R +L E++ YAR+R   GG LID+P+M+R +A++ +D
Sbjct: 319 LARMMELTNAARLGIASFALGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVD 378

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L F      +  + R+     A    P+TK   C++  +  ++A+E  GG+GY+
Sbjct: 379 VEAAQTLVFDGLGVANHRQPRTIRQRIA---VPVTKLKVCRLGISAASDAIEIHGGNGYV 435

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           E   +AR  R++  N+I  G  N + LDV   +E+ T+  E L + L   +  + +   T
Sbjct: 436 ENWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TSAHETLLARLRDAVSVADRDDTT 494

Query: 486 ILRD-----------SISLCKEDKGLARF--LTEKIALASSAAALYRAGMND-------- 524
            L +           + +      G AR   LT+ +    + A L      +        
Sbjct: 495 RLVEARIDDLDAAITAWTKLDRRLGEARLFPLTQFMGDVYAGALLIERASWEREVSGTDR 554

Query: 525 ---IADVFLENRFLDNC 538
              +A ++ E    D  
Sbjct: 555 AALVARLYAERYLADRG 571


>gi|115377697|ref|ZP_01464890.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821553|ref|YP_003953911.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115365303|gb|EAU64345.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394625|gb|ADO72084.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD+ E  P    ++R     G+   +    +            A           
Sbjct: 26  PYAREWDQNETFPM--EVVRELGQLGVMGMLVSEEYGGAAMDSLAVAVAVEEIARYDGSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +    S + +       + + PK+ + E+                 GLTE   
Sbjct: 84  ALTVASHNGLGTSHIRVFGNEAQKRKYLPKLATGEW-------------LGAWGLTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + + +   +  D         +     + DAF++LA          +   + +   
Sbjct: 131 GSDASGLRATAVRQGDAWVLNGAKMFITQGTVGDAFVVLALTSPEKRQKGITAFILEKGM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G   + +  K+G RS+ T EL   N        L  V  G ++ +KIL    +    ++
Sbjct: 191 KGFSQRPIHGKLGMRSSDTAELILENVEVPDSQRLGEVDRGFIDTLKILDKGRITIGALA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L E++ YAR R   G  + +   ++   AD+  ++ AA  L  R A+  D+ +
Sbjct: 251 VGLGRGALEESVRYARERSAFGQPIAEFQGLRWMFADMKTELDAARLLVHRAASMADQNQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++ A+ A       K +  + A     +A++  GG GY  E  + R+ R++    I  
Sbjct: 311 PYTQAASMA-------KLFASEAATRACNKAVQIHGGYGYTREFPVERYLRDAKLCEIGE 363

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+       +   + KG
Sbjct: 364 GTSEVQRTVIAREIFKG 380


>gi|83717970|ref|YP_439144.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|257142257|ref|ZP_05590519.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651795|gb|ABC35859.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 393

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 131/374 (35%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEVDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRKYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +            W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVSMKLRADRRGSRFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D A 
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDSA- 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S    +AR           + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 316 -GSAHVRHARKDCAGVILHTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|73539846|ref|YP_294366.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72117259|gb|AAZ59522.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 376

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 145/395 (36%), Gaps = 33/395 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     Q     P   +WD+ +  P    + R     G +      ++      
Sbjct: 7   QEMIRDAVRQFAQ-EVIAPQAAQWDRDKTFP--KDVHRELAGLGAYGVAVPEAYGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+         + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMMMAFANEAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +  D  Y L+G K F++S   +D  I+LA 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-YVLNGVKQFITSGKNADVAIVLAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   L   +  G    RL++K+G  S+ T ++   +        L      
Sbjct: 170 TDKAAGKRGISAFLVPTNTPGYIVARLEDKLGQHSSDTAQIVLEDCRVPAANMLGDEGAG 229

Query: 309 VEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +    L  L+   + ++   + +       A+ YA+ R   G  L     ++  +AD+A
Sbjct: 230 YK--MALSGLEGGRIGIASQSIGMARAAFDAALAYAKERESFGQPLFQHQAVQFRLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I  A  + +  A+  D  +   +EAA A       K +  +MA  V ++A++  GG G
Sbjct: 288 TRIDVARQMVWHAASLKDAGRPCLKEAAMA-------KLFASEMAEKVCSDAIQVFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YVSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|84502592|ref|ZP_01000711.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84388987|gb|EAQ01785.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 387

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 145/400 (36%), Gaps = 37/400 (9%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    PA   L +     GL        +  
Sbjct: 9   DLGEDVNALRDLVHRFAQERIKPQAAEIDRSNTFPA--PLWQEMGELGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L  T      + P + S E+  
Sbjct: 67  TGLSYLAHVVAVEEIARASASVSLSYGAHSNLCVNQIKLNGTEEQKARYLPGLVSGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEPSAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   + +    G       +K+G R + T EL F +         NV 
Sbjct: 174 YAKTDPDAGSKGITAFIIEKDMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPF---ENVL 230

Query: 306 TGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               + +++L+  LD        +    M   L E + Y   R   G  + +  +M+  I
Sbjct: 231 GEEGKGVRVLMSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKI 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + +A A ++ +A + D  +   ++AA           +  + A  V  +A++ +
Sbjct: 291 ADMYTKMNSARAYTYEVAKACDRGEVTRQDAA-------ACVLYASEEAMVVAHQAVQAM 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GG+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 344 GGAGYLNDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|332027694|gb|EGI67762.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 422

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 141/372 (37%), Gaps = 21/372 (5%)

Query: 96  KVEFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           K E  PA   + +++ I DG+   +++     +     +   A   ++   L    +   
Sbjct: 62  KEEIAPAVRKMEKQNKIDDGVLKVLFENGLMGLEIPTDYG-GAGCNFMSTILTVEEVAKV 120

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A++V +  T  +      K+ S+E+      P      A    LTE   G+D  A+
Sbjct: 121 DGAVAALVDIHNT--LVNSLIIKVASKEH-KEKYLPKLAQKYAGSFCLTEPNSGSDAFAL 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K            W  +S ++  F++ A      G   +     D    GL   +
Sbjct: 178 KTVAKKDGSDYVINGTKMWISNSDIAGVFLVFANANPSAGYRGITTFFVDRDTPGLTVGK 237

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA 333
            ++K+G +++ T  + F N         N+     +  K    +L+   + +    + +A
Sbjct: 238 PEDKLGIKASGTCMVHFDNVRVPES---NILGEFGQGYKYAAGFLNEGRVGIGAQMIGIA 294

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +      I Y   R   G  +     M+  IA    D+  A  L +  A   D  K   +
Sbjct: 295 QGSLDATIPYTLERKQFGKDVFSFQAMQHQIAQAVTDLECARLLVYNAARLVDAKKDVMK 354

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA A+++A        + A  V  + ++ +GG G+  +    ++YR++   +I  G+ N
Sbjct: 355 EAAMAKLIA-------SETASRVTTKCIDFMGGVGFTTDFPQEKYYRDAKIGTIYEGTSN 407

Query: 449 AMVLDVLNLLEK 460
             +  +   + K
Sbjct: 408 MQLSTIAKCIRK 419


>gi|90418708|ref|ZP_01226619.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336788|gb|EAS50493.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 637

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/569 (20%), Positives = 204/569 (35%), Gaps = 74/569 (13%)

Query: 12  MNQVHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P+ D+LF LN     +G + Y++   L       P VV   L   G  + S   
Sbjct: 40  MPTYQAPTEDTLFVLN---DLLGFDRYNN---LPGFADASPDVVEAILGEAG-RIASEVL 92

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q L R+ +            G     V     + A        G     +D  +      
Sbjct: 93  QPLNRVGDIEG---CTRASDG----SVTTPEGFKAAYDTFREGGWGSLPFDPEYGGQGLP 145

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             H +  A    M+       M P +T+ ++ A+    +    + + PK+    +  T  
Sbjct: 146 --HTLATAVSEYMSSANMAFAMYPGLTAGAIAAISVHGSNEQKQTYLPKMIDGSWTGT-- 201

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
                      + LTE   GTD+  + ++     DG Y +SG K F+S+   D       
Sbjct: 202 -----------MNLTEPHCGTDLGLLRTKAVPQDDGSYRISGQKIFISAGEHDMADNIVH 250

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G  NG+    L+ K+G   NAT  + + 
Sbjct: 251 LVLARIEGAPEGVKGISLFIVPKFVLDADGNPGERNGVVCGSLEEKMGIHGNATCVMNYD 310

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
           +  G+L+G+ +     +  M     L   +  ++   V+   A+ YAR R          
Sbjct: 311 DATGYLIGEADKGLRAMFTMMNEARLGVGVQGLAISEVAYQNAVTYARERIQGRSLSGAK 370

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSEEAAYAR 394
                   +I  P ++R +  I     A  AL    A      +  DE K R     +  
Sbjct: 371 APEKKADPIIVHPDIRRILMTIRSINEAGRALVLWTALKGDLSHRADEEKDRQAADDWMG 430

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +M P+ K             A +  GG GYI E  + +  R++    I  G+     LD+
Sbjct: 431 LMTPVIKGVLTDKGFDNAVMAQQVYGGHGYIGEWGMEQFVRDARIAQIYEGANGIQALDL 490

Query: 455 LN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARFLTEKIAL- 510
           +   L   G    +  F+ + Q    +   + +  L  ++     D   A     + A+ 
Sbjct: 491 VGRKLGLNGGRAVQSFFAEVGQFCEENRADEAMAPLTKALKKGLNDLQQATMWLMQNAMA 550

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 551 KPDNAGAASTDYMHLFGLVAMGYMWGRMA 579


>gi|167589376|ref|ZP_02381764.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 393

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 137/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R A  N        P     D+ +  P    L ++    G+        +   
Sbjct: 12  GEDIEMLRDAVANFA-AKEIAPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    T    + + PK+ S E+   
Sbjct: 69  NMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTEAQKRKYLPKLVSGEH--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P  D  ++ 
Sbjct: 126 ----------IGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + +    G    +  +K+G R + T EL F +        L    
Sbjct: 176 AKTDIEAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A++S      M   L   + Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGVKVLMSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               A  A  + +    D A   S+     R        +  + A  +  EA++ +GG+G
Sbjct: 296 TTFQACRAYLYAVGRHLDSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|112005099|gb|ABH85388.1| isovaleryl-CoA dehydrogenase [Beta vulgaris]
          Length = 409

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 140/394 (35%), Gaps = 30/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ A  N        P  E+ DK  + P    L +      LH     +      + 
Sbjct: 40  ESVAQFAQEN------IAPHVEKIDKTNYFPKDVNLWKLMGDFNLHGITAPEEYGGLGLG 93

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +     P   + + PK+ S ++      
Sbjct: 94  YLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGNPAQKQKYLPKLISGDH------ 147

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +  ++  G        W  + P +   I+  + 
Sbjct: 148 -------VGALAMSEPNSGSDVVSMKCRADRVDGGYMLNGNKMWCTNGPTAQTLIVYTKT 200

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  V    +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 201 DMAVHTKGITAFIIEKGFPGFSTAQKLDKLGMRGSDTCELVFENCFVPQDNVLGEEGKGV 260

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M     L  L  A   +  M+  L   + Y R+R   G  +     ++  +AD+   +
Sbjct: 261 YVMMSGLDLERLVLASGPLGIMQACLDVVLPYVRQREQFGRPIGQFQFIQGKVADMYTSL 320

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A   D  +   ++ A   + A        + A  V  +A++C+GG GY+ 
Sbjct: 321 QSSRSYVYSVARDCDSGQVDPKDCAGVILCAA-------ERATQVALQAIQCLGGHGYVN 373

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E S  R  R++    I  G+     + +   L K
Sbjct: 374 EYSTGRLLRDAKLYEIGAGTSEIRRMIIGRELFK 407


>gi|300087514|ref|YP_003758036.1| acyl-CoA dehydrogenase domain-containing protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527247|gb|ADJ25715.1| acyl-CoA dehydrogenase domain protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 382

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 136/371 (36%), Gaps = 23/371 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+ E  P    +++     GL           +         A   +           
Sbjct: 30  ELDEKEEFPV--EIMKDIAASGLFGIAIPEELGGIGGGAFELCLATEQFARVCGGVAVSY 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A ++    +      + P I S                     LTE+  G+D  
Sbjct: 88  AANFLGAEILIDNGSEEQKARYLPDIASG-------------GRLCAFALTEESAGSDAG 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+ +   K   G       ++  +   ++ + ++A  +   G   +   + +    G  +
Sbjct: 135 AVKTTAVKTEGGYLLNGSKRFITNGGDAELYTVIACTDPGKGARGLSAFIVEKGIPGFTF 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMR 329
            R + K+G R+++T EL F++        +     G    MK+           +V   +
Sbjct: 195 GRKEKKMGIRASSTRELLFNDCLVPAENLIGREGMGFFHTMKLFEKSRPGIGSQAVGIAQ 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI +AR R   G  + +   ++  +A++A+DI AA AL +  A + D    +S  
Sbjct: 255 GAFEAAIDHARNRVQFGEPVFNFQAVQHMLANMAMDIEAARALVYASARTIDSGLQKS-- 312

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                + + ++K +   ++  V  +A++ +GG GY+ +  + +  R++    I  G+   
Sbjct: 313 ---GNLESAMSKVYASDVSMRVATDAVQILGGVGYMRDYPVEKFMRDAKITQIYEGTNQV 369

Query: 450 MVLDVLNLLEK 460
           +   + + L K
Sbjct: 370 LRNIIASELRK 380


>gi|323524561|ref|YP_004226714.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381563|gb|ADX53654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 376

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 137/378 (36%), Gaps = 28/378 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           A  P    WD+    P    + R+    G +  +   ++                     
Sbjct: 21  AITPHAAAWDRERTFP--KDVHRQLAELGAYGVLVPEAYGGAGMDALALALILEEIAAGD 78

Query: 146 LEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +S +      + L   +    +DW               P+ +  +     LTE
Sbjct: 79  GGTSTAISVNNCPVCSILLTYGSDAQKRDWL-------------TPLARGEMLGAFCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
            + G+D +A+ +   +  D  Y L+G K F++S   +   I++A  +   G   +   + 
Sbjct: 126 PQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNAQVAIVMAVTDKAAGKRGISAFIV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               +G    RL++K+G  S+ T ++ F +       L+G                 +  
Sbjct: 185 PTDSSGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIGAEGEGYRIALSGLEGGRIGI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  A   
Sbjct: 245 AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQFRLADMATQLEAARQLIWHAAALK 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+    
Sbjct: 305 DAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRVC 357

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+ +   + +   L
Sbjct: 358 QIYEGTSDIQKILIARGL 375


>gi|302865444|ref|YP_003834081.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315501992|ref|YP_004080879.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302568303|gb|ADL44505.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315408611|gb|ADU06728.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 387

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 126/376 (33%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P   A          H       +                   A   +
Sbjct: 33  PHAAEADETGEFP--KASYEALRAADFHAPHIPVEYGGAGADALATAIVIEEVARACASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + + +               P+          L+E   G
Sbjct: 91  SLIPAVNKLGTMPLLLAGSEELKRKYL-------------TPVAAGEGMFSYCLSEPEAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+T++  +  D        +W  ++ +S+ + + A  +       +   + + S  
Sbjct: 138 SDAAAMTTKAVRDGDHWVLNGVKRWITNAGVSEYYTVFAVTDPTARSKGISAFVVEKSDP 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+ F N        +    TG    MK L    +  A  +V
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGAEGTGFATAMKTLDHTRVTIAAQAV 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + D   ++  +AD+ + + AA  L++  A   +    
Sbjct: 258 GIAQGALDYAKGYVQERKQFGKPVADFQGIQFMLADMGMKLEAARQLTYAAAGRSERGD- 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 317 -----ADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L KG
Sbjct: 372 TNQVQRIVMARQLLKG 387


>gi|212636148|ref|YP_002312673.1| butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557632|gb|ACJ30086.1| Butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 385

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 150/400 (37%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   ++ A +A    T +L    P   +WD+    P    +++++   G       
Sbjct: 2   DFNLNEDQRQFADLAQQFSTEELA---PFAAKWDEEHHFP--KDVIQKAGELGFCSLYSP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +           M       +++    +  MV    +  +  +W+ ++ + 
Sbjct: 57  ESEGGMGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMVTSFGSQTLRDEWSEQLTTG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D A++ ++  +  D  Y +SG K F+S   + 
Sbjct: 117 E-------------KLASYCLTEPGAGSDAASLQTKAVRDGDD-YLISGSKVFISGAGAT 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++    G  G   +  +      +G+ Y + ++K+G  +  T ++ F N        
Sbjct: 163 EMLVVMCRTGEAGPKGISAIAIAADADGVSYGKAEDKMGWNAQPTRQITFDNVRVPASNL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++ A  S+   + +L  A  Y   R   G  L     ++  
Sbjct: 223 LGEEGQGFTFAMKGLDGGRINIATCSIGTAQAALERATGYMNERKQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  L    A   D+          A     + K +   +   V   A++ 
Sbjct: 283 LADMATELVAARQLVRLAAFKLDQQDPE------ATAYCAMAKRFATDIGFQVCDAALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI E  + RH R+   + IL G+   M L +   L
Sbjct: 337 HGGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIISRRL 376


>gi|66826751|ref|XP_646730.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4]
 gi|60474589|gb|EAL72526.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4]
          Length = 628

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 135/568 (23%), Positives = 236/568 (41%), Gaps = 78/568 (13%)

Query: 25  LNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKE----LELLGEYVLSCTAQELARMANY 79
             Q    +G N Y  D+ L  AL    P+ + KE    L   GE V+     EL R +  
Sbjct: 20  FQQQSPLLG-NQYIEDTQLIRALQRVLPAKILKEIEGDLTQFGERVVKD-ILELGRASEN 77

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  Y   G+R DK+    +W+ L      +GL    ++R ++   R      +  +
Sbjct: 78  NPPKLIQYDAWGKRIDKIVVDESWNKLKDIGCSEGLVSIGYERKYQEYSR----IYQYIK 133

Query: 140 LYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +YL A   A      S+T  +A ++ L     + +D      SR+          KT   
Sbjct: 134 IYLFACSSAVFDCPMSMTDGAARLIELYGDKGMKEDEYKHFISRD---------PKTFWT 184

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS--DGIYCL-SGHKWFLSSPMSDAFIMLAQ-VEGRV 253
            G  +TEK GG+D++   +        DG  C  SG+K+F S+  S+  ++LA+ V+   
Sbjct: 185 SGQWMTEKTGGSDVSKSETIAVSSGSGDGKTCNLSGYKYFTSATTSEGAMVLARDVDDAK 244

Query: 254 GCFLV---PR-----LLEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                    R      ++   PNG    +   +LKNK G ++  T ELE   T    +G 
Sbjct: 245 TMKGAVEGSRGLSVYFIKLRKPNGELDRIQVHKLKNKFGTKAVPTAELELMGTPAVRVGP 304

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +  +  +  + + I S + MR  +A    +A RR V G +L D  +    +A+
Sbjct: 305 KGRGVPVIASILNITRIHNVIHSAATMRRCVAIVRDFAHRRTVFGKLLKDNLLYLSTLAE 364

Query: 362 IALDIAAATALSFRL-------ANSFDEAKSRSEEAA----YARIMAPITKYWCCKMAPA 410
           + L+  A+  L   +           ++  S SEE        RI+ P++K +  K +  
Sbjct: 365 MELEFRASLHLLLDVTLLLGKSERIVEKQSSNSEEQKQIDLLLRIVTPLSKLYTAKQSVT 424

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           V +EA+E +GG+GY+E+  + R +R++   SI  G+ N + +D+   L K     +  F 
Sbjct: 425 VASEAIEALGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDIWRTL-KEPLTIKFYFQ 483

Query: 471 TLEQDLGSSGK---------KVITILRDSI------------SLCKEDKGLARFLTEKIA 509
           ++E  L  + K         KVI+++R+++               +  +  +R     +A
Sbjct: 484 SIENRLIQANKLLNNDNNIQKVISVIREAMKTIRSVIDKVMNGDMEYAESNSRRFAYLMA 543

Query: 510 LASSAAALYRAG-------MNDIADVFL 530
               A+ L              +A+ + 
Sbjct: 544 QTYMASLLLEHAVWSKDELDAQVAERWC 571


>gi|288959958|ref|YP_003450298.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288912266|dbj|BAI73754.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 390

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 139/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P  + L RR    G+     +  +         H +    +   +   
Sbjct: 34  PRAAEIDRSNEFP--NELWRRMGDLGILGVTVEEEYGGAGMGYLEHVVAMEEVSRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQIRKNGNEEQKRRYLPKLISGEH-------------IGALAMSEPNA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 139 GSDVVSMKLRAEKRGDRYVLNGTKMWITNGPDADTLVIYAKTDLAAGPRGITAFLVEKGF 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A+++   
Sbjct: 199 KGFSVAQKLDKLGMRGSNTGELVFEDCEVPEENILGGVGRGVNVLMSGLDYERAVLAGGP 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   I Y   R   G  + +  +M+  IAD+   + AA A  + +A + D  +
Sbjct: 259 LGIMQACMDVVIPYVHDRKQFGQPIGEFQLMQGKIADMYTVMNAAKAYVYTVAKACDRGE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  + A  +  EA++ +GG+GYI E    R  R++    I  
Sbjct: 319 TTRKDAAAA-------ILYSAEKATWMALEAIQTLGGNGYINEYPTGRLLRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T 
Sbjct: 372 GTSEIRRMLIGRELFKETA 390


>gi|293609434|ref|ZP_06691736.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827886|gb|EFF86249.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 378

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 78/391 (19%), Positives = 136/391 (34%), Gaps = 31/391 (7%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
            QE+ R  NY   QL          DK    PA   L       G         +     
Sbjct: 10  VQEMMR--NYAQNQLKPTAAY---RDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGM 62

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNK 188
                + A             ++S   +    + L   + +  + + PK  S E+     
Sbjct: 63  DYVSLVLAIEEIAAGDGAISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW----- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                        LTE   G+D +AI  + ++  D        ++  S   +   ++ A 
Sbjct: 118 --------LGCFCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
            + + G   +   L   +  G    R+++K+G  ++ T  + F +    L   +     G
Sbjct: 170 TDKQAGKKGISCFLVPTNTQGYLVTRIEDKMGQHASDTATINFEDCRIPLENLVGQEGEG 229

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L    +  A  SV   R +   A+ YA  R   G  L+    +   +AD+A  
Sbjct: 230 YKIALSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L    A   D      +EA+ A       K +   MA  V ++A++  GG GY+
Sbjct: 290 IEAAHQLVLHAATLKDAGLPCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYV 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  + R YR+   + I  G+ +   L +  
Sbjct: 343 SDFPVERIYRDVRVSQIYEGASDIQRLVIAR 373


>gi|209548161|ref|YP_002280078.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533917|gb|ACI53852.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 592

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/513 (19%), Positives = 192/513 (37%), Gaps = 63/513 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDG 114
           L  L E ++     E  R A      L       G R +  +V     W  L R  I  G
Sbjct: 28  LGDLSEDLVDAVLSEAGRFATEEVAPLADIGDRQGARLEGGEVRLPDGWRDLYRSWIAGG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
            +      +F        H +  A L +         ++P++T  ++ A+    +  + +
Sbjct: 88  WNGLTAPEAFGGQALP--HMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKE 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T             + LTE   G+D+  + ++ ++ +DG Y + G K
Sbjct: 146 KYLEKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQK 192

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    DA      ++LA++         +  FLVP+ L +     G+ N L    L+
Sbjct: 193 IFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLE 252

Query: 277 NKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +K+G   + T  + + +          G+L+G+ N     +  M     L   +  V+  
Sbjct: 253 HKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIA 312

Query: 329 RVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +A+ YA+ R               +++ P + R +  +      A A+S+  A++
Sbjct: 313 EAATQKAVAYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHA 372

Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            D               A ++ PI K +       V +  ++  GG G+IEE   AR+ R
Sbjct: 373 IDMSHRAGDVSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARYLR 432

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-- 491
           ++    I  G+       L    L   G    +   + L++      +  +    ++   
Sbjct: 433 DARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRRSNLDGFAETSVR 492

Query: 492 --SLCKEDKGLARFLTEKIALASSAAALYRAGM 522
             +   + +    +LT+ +A   +A AL  A  
Sbjct: 493 LDAAISDLEAATDWLTKTLADGKAAEALSGATP 525


>gi|312381501|gb|EFR27238.1| hypothetical protein AND_06191 [Anopheles darlingi]
          Length = 393

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 142/378 (37%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK        +  R+    G+        +  +      H I    +   +   
Sbjct: 34  PFAQEIDKQNEFKELRSFWRKLGDLGVLGVTVKPDYGGLGGSYLDHCIVNEEISRASGSI 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ + E+                L ++E   
Sbjct: 94  ALSYGAHSNLCVNQIHRHGTEEQKQRYLPKLCNGEH-------------IGALAMSEAGS 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D+ ++  +  K  D  Y L+G+K+++++  ++D +++ A+ +        +   + + 
Sbjct: 141 GSDVVSMKLRADKQGD-YYVLNGNKFWITNGSVADTYVIYAKTDASAKPQHGITAFIVER 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R + T EL F +     G +LG LN     +     L  L  A 
Sbjct: 200 GTAGFTQGPKLDKLGIRGSPTSELIFEDVKVPVGNVLGGLNKGVYVLMSGLDLERLVLAA 259

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA  R      + +  +++  +AD+   + A  A  + +A + D 
Sbjct: 260 GPVGLMQAACDVAFEYAHVRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARACDA 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +  ++             +C + A  +  +A++ +GG+GYI +    R  R+     I
Sbjct: 320 GHANPKD-------CAGVILYCAEKATQIALDAIQILGGNGYINDYPTGRIMRDCKLYEI 372

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 373 GAGTSEIRRMLIGRALNK 390


>gi|71021499|ref|XP_760980.1| hypothetical protein UM04833.1 [Ustilago maydis 521]
 gi|46101055|gb|EAK86288.1| hypothetical protein UM04833.1 [Ustilago maydis 521]
          Length = 424

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 133/357 (37%), Gaps = 24/357 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             + R+    GL        +  + +    H I    L   +   A    + S    + +
Sbjct: 81  KDIWRKLGSMGLLGITAPEEYGGLAKGYLDHTIVMEELSRASGSVALSYGAHSNLCVNQL 140

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + P + S E                 L ++E   G+D+ ++T+   K  
Sbjct: 141 NRHGTKEQKQKYLPDLISGE-------------KVGSLAMSEPDAGSDVVSMTTTAVKDG 187

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D      G  W  ++P+S  FI+ A+ + + G   +   + +    G       +K+G R
Sbjct: 188 DDWVLNGGKMWITNAPISSTFIVYAKTDVKAGSKGITAFILERGMTGFTTLPKLDKVGMR 247

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T E+ F N       +LG +N     +     L  L  +   +   + +   A+ YA
Sbjct: 248 GSDTGEIHFDNVRVPATNVLGTVNRGAAVLMSGLDLERLVLSGGPLGLAQCAFDYAVRYA 307

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R      +    +M+  IAD+   I+AA +  + +A + D       + A A      
Sbjct: 308 HQRKQFNQPIAHFQLMQAKIADMYTKISAARSYVYAVARACDLGHISRRDCAGA------ 361

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +    A  V ++AM+ +G +GY  +  I R +R++   ++  G+     + +  
Sbjct: 362 -ILYASDRAVEVSSDAMQILGANGYTNDYGIDRMWRDARLYTVGAGTQEIRRMLIGR 417


>gi|328543528|ref|YP_004303637.1| acyl-CoA dehydrogenase family member 8 [polymorphum gilvum
           SL003B-26A1]
 gi|326413272|gb|ADZ70335.1| Acyl-CoA dehydrogenase family member 8 [Polymorphum gilvum
           SL003B-26A1]
          Length = 379

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     LR++   G                +                 
Sbjct: 26  PHAREWDEKSHFPV--DTLRKAAALGFGGIYVRDDVGGSGLSRLDAALIFEELSKGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+    +  + + + P + +              +      LTE   G
Sbjct: 84  AAYISIHNMAAWMIDTYGSDELRRKYLPDLCAM-------------TTFASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++     D  Y L+G K F+S    SD ++++A+  G  G   +  L+ +   
Sbjct: 131 SDAASLRTRAVADGDH-YVLNGSKAFISGGGTSDVYVVMARTGGE-GPKGISCLVVEKGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G +S  T ++ F +       L+G                 L+    S
Sbjct: 189 PGLSFGAQEVKLGWKSQPTAQVNFEDCRVPKANLVGTEGEGFRIAMAGLDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L  A+ Y + R   G  L +   ++  +AD+A ++ AA  L  + A   D   
Sbjct: 249 LGAAQTCLERAVAYMKERRQFGRALAEFQALQFRLADMATELEAARLLLHKAAVLVDAKA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A   A + K     +   V+ EA++  GG GY+ +  I R  R+   + IL 
Sbjct: 309 PE------ATRTAAMAKRLATDVGFTVVNEALQMHGGYGYLRDYPIERFLRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L V   L
Sbjct: 363 GTNEIMRLIVARDL 376


>gi|255535005|ref|YP_003095376.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341201|gb|ACU07314.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 393

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 140/374 (37%), Gaps = 28/374 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L  +    G    +    +         +      +  +       L
Sbjct: 43  EWDESQHFPV--ELFHKLGEMGFMGIVIPEEYGGSGLGYHEYVTILDEISQVDPSIGLSL 100

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +           W P++ S                    GLTE   G+D 
Sbjct: 101 AAHNSLCTNHIYEFGNEEQRHRWLPQLASG-------------KTLGAWGLTEHNTGSDS 147

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + +   K  D  + ++G K F++  +S D  +++ +   +         + +    G 
Sbjct: 148 GGMNTTAVKDGDD-WIINGAKNFITHAISGDIAVVMTRTGDKGAKNNSTAFVLEKGMAGF 206

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              R +NK+G R++ T EL F N        L  V +G  + MKIL    +  A +S+  
Sbjct: 207 SSGRKENKLGMRASETAELIFDNIRVPDANRLGEVGSGFKQAMKILDGGRISIAALSLGI 266

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A+ Y+  RH  G  +     +   +AD+A +I A+  L  R +N  +  K  +
Sbjct: 267 ARGAYKAALKYSLERHQFGKPINQFQAINFMLADMATEIDASELLIQRASNLKNAKKPMT 326

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E A A       K +  +    +   A++  GG GY ++    ++YR++   +I  G+ 
Sbjct: 327 KEGAMA-------KLYASEACVRIANNAVQIFGGYGYTKDFPAEKYYRDAKLCTIGEGTS 379

Query: 448 NAMVLDVLNLLEKG 461
               L +   + KG
Sbjct: 380 EIQKLVIGREISKG 393


>gi|255318743|ref|ZP_05359970.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378078|ref|ZP_06071235.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304241|gb|EET83431.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299363|gb|EEY87275.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 130/353 (36%), Gaps = 26/353 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +      ++  A  +   +        + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYGGLGLTMEEELYIAFEIGRTSPAFRSIFGTNNGIGSSGIIIDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K + P+  S E             +     LTE   G+D A++ +   K  D       
Sbjct: 106 KKKYLPRYASGE-------------IIGSFCLTEPESGSDAASLKTTAVKDGDFYILNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P++  + ++A+    + G   +   + D + +G+   +   K+G +   T ++
Sbjct: 153 KRYITNAPLASTYTVMARTNPDIKGSGGISAFVVDRNTSGISLGKKDKKMGQQGTYTCDV 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        +      G    MK+L    L  + +SV      L +A+ YA  R   
Sbjct: 213 IFENCRVPASALIGGVEGIGFKTAMKVLDKGRLHISAVSVGAAERMLDDALRYAVERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD   +I AA  +    A   D+  + S E+          K +  
Sbjct: 273 GQPIASFQLIQAMLADSKAEIYAAKCMVLDAARRRDQGLNVSTES-------SCAKLFAT 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +M   V    ++  GG+GYI E SI R YR+     +  G+     + +   +
Sbjct: 326 EMCGRVADHCVQIHGGAGYISEYSIERFYRDVRLFRLYEGTSQIQQIIIAKNM 378


>gi|213967726|ref|ZP_03395873.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382364|ref|ZP_07230782.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302062376|ref|ZP_07253917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato K40]
 gi|213927502|gb|EEB61050.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 592

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 92/493 (18%), Positives = 175/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGDPVFGGMGMPKIVSAQVEEMINSASLAFGLYAMLTSGACVSINTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGMIRTKAEPQTDGAYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G+ N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSLGARNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAVDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R      A ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLAALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q + +S   +    R   +  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFIDTSDSSLGEFTRPLTAAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|154250918|ref|YP_001411742.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154868|gb|ABS62085.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 597

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/553 (19%), Positives = 197/553 (35%), Gaps = 60/553 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEF 99
           LL  L+                 ++    +E A++       L+      G + +  V  
Sbjct: 14  LLNELLDFSQYAHLPGFADAPADLVDAILEEAAKLTEEVLLPLNQIGDREGCKLENGVVT 73

Query: 100 HP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            P  +    +  +  G    + D ++       A  +    +   A +  G     S  +
Sbjct: 74  TPTGFKEAYKTLVDGGWPALVADTAYGGQGLPNALGVIFNEMVSSANMAFGMYPGLSHGA 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S ++   T    K + PK+ + E+  T             + LTE   GTD+  + ++ 
Sbjct: 134 YSALSQHGTDEQKKKYLPKLVTGEWTGT-------------MNLTEPHCGTDLGLLRTKA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED--- 264
             + DG + +SG K F+S+   D       ++LA++EG       +  FLVP+ L +   
Sbjct: 181 VPVGDGSFKISGQKIFISAGEHDLADNILHLVLARIEGAPAGVKGISLFLVPKFLVNEDG 240

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G+ NG+    L+ K+G   NAT  L +    G+L+G+ +     +  M     L   +
Sbjct: 241 SLGNRNGVSCGSLEEKMGIHGNATCVLNYDEAIGWLVGEEHKGLRAMFTMMNEARLGVGL 300

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT 370
             +S    +   A+ YA  R                  LI  P ++R + DI      A 
Sbjct: 301 QGLSQSEAAYQNAVTYALERLQGRSLTGPKAADKAADPLIVHPDIRRMLLDIKSFNEGAR 360

Query: 371 ALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL    A      +  D+ K+R        ++ P+ K +          +A +  GG GY
Sbjct: 361 ALLVWTALHGDLSHRSDDEKTREFGEDMMSLLTPVLKGYFTDRGFMNAVDAQQVYGGHGY 420

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS--G 480
           IEE  + +  R++    I  G+     LD++   L + G       F T++     +   
Sbjct: 421 IEEWGMEQFVRDARIAMIYEGANGVQALDLVGRKLAQNGGRAVFAFFKTIDDFAAQNQGD 480

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENRFL 535
           +K+   +   I   K+ +    +  E  AL     A + +  Y           +     
Sbjct: 481 EKLKPFVEPLIRARKDLEAATLWFMEN-ALQNADHAGAGSTPYMHLFGVTGLALMWAMMA 539

Query: 536 DNCHSTHCMLHGR 548
              H     L+G 
Sbjct: 540 KAAHERLATLNGG 552


>gi|92114549|ref|YP_574477.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797639|gb|ABE59778.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 603

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 94/529 (17%), Positives = 181/529 (34%), Gaps = 67/529 (12%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW- 94
           ++ D +L     ++      + + +   V+S   +E AR        L+      G R  
Sbjct: 13  FAMDEVL-DYPRHYAG--LPQADDVTPDVVSAILEEGARFTRDVLLPLNQVGDTHGCRLE 69

Query: 95  -DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+V   P +     + +  G      D + E      +  +  + +     L  G    
Sbjct: 70  GDQVVTPPGFKEAYAQYVEGGWPSLSGDPAHEGQGLPTSLGMVLSEMVCSTNLAWGMYPG 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +A  +    +      +  K+                +    + LTE + GTD+  
Sbjct: 130 LSQGAADALRHHGSEAQKAQYLAKL-------------NAGTWTGTMCLTEPQCGTDLGL 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL 262
           I ++ Q   +  Y ++G K F+S+   D       ++LA++         +  F+VP+ L
Sbjct: 177 IKTRAQPDGEEGYRITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGTKGISLFVVPKYL 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
            D     G  N +    L++K+G   NAT  + F    GFL+G+ +     +  M  +  
Sbjct: 237 PDAEGGIGERNAVSCGSLEHKMGIHGNATCVMNFDGARGFLVGEPHKGLACMFTMMNVAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           +   I  +  M +S   A+ YAR R                  +I  P ++R +      
Sbjct: 297 IGVGIQGLGLMEISFQNALAYARERLQMRALSGTQNTDKPADPIIAHPDVRRMLLTQKAL 356

Query: 366 IAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                 +    A   D  +       R        ++ PI K +  ++      E ++  
Sbjct: 357 AEGGRMMVLYAAQLADTVECSASDSERESAETLLGLLTPIVKAFLTEVGFEATNEGVQVF 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GYI E  + ++ R++    +  G+     LD+L                +    G +
Sbjct: 417 GGHGYIREWGMEQYVRDARITRLYEGTTGIQALDLLG-------------RKVLMSQGEA 463

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIAD 527
            K     +       + +  +A F+T    L +         GM  + D
Sbjct: 464 LKPFTKQIHKFCKAHEANDAMAEFVTPLAKLNAEWGDLTMAVGMKAMQD 512


>gi|312116094|ref|YP_004013690.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221223|gb|ADP72591.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 378

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 141/381 (37%), Gaps = 32/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    PA  A L+     G+   +    +          + A       
Sbjct: 20  ENITPFAAEWDRNHTFPA--AALKGLAELGVMGVVVPEEWGGAGMDYLSLVLAIEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++S   + A  +     +    + W               P+ +        LT
Sbjct: 78  DGATSTIVSVQNSLACGITCAYGSAEQKETWLK-------------PLARGEKLGCFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D +AI +  ++  D        ++  +   +D  I+ A  +   G   +   L 
Sbjct: 125 EPHVGSDASAIATTARRDGDSFIINGAKQFITTGKHADVAIVFAVTDKSAGKKGISAFLV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAI 322
             +  G    R+++K+G +++ T ++ F N          +     +  +I L  L++  
Sbjct: 185 PTATPGYVVARIEDKMGQKASDTAQILFENCRVPASA---LLGKEGDGYRIALSNLEAGR 241

Query: 323 MSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   V +       A+ YA+ R   G  +I+   +   +AD+A ++ AA  L +R A
Sbjct: 242 IGIASQAVGMARAALEAAVAYAKERQTFGKPIIEHQAVSFRLADMATEVDAARLLVWRAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D      +EA+ A++       +  +MA  V + A++  GG GY+ +  + R YR+ 
Sbjct: 302 MLKDAGLPCLKEASMAKM-------FASEMAERVCSGAIQVHGGYGYVSDFPVERIYRDV 354

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+ +   L +   +
Sbjct: 355 RVCQIYEGANDIQRLVIGRAI 375


>gi|146298219|ref|YP_001192810.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146152637|gb|ABQ03491.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 380

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 128/371 (34%), Gaps = 26/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS- 153
           D+ +  P     +++    G    + D  +          + A          A  +MS 
Sbjct: 32  DEKQIFPT--EQVKKMGELGFMGMMVDPKYGGSGLDAISYVIAMEEISKIDASASVVMSV 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T    + + P + S +                   L+E   G+D  +
Sbjct: 90  NNSLVCWGLQEFGTEEQKQKYLPGLASGQIHG-------------AFCLSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +    + D         W  +   +  ++++AQ    +    +  L+      G    
Sbjct: 137 QKTTAIDMGDHYLVNGTKNWITNGNTASVYLVIAQTHPELKHKGINALIMTKDMPGFSVG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRV 330
             + K+G R + T  L F++        +     G    MK L    +  A  ++     
Sbjct: 197 PKEQKMGIRGSDTHSLMFTDVKVPKENRIGEDGFGFKFAMKTLAGGRIGIASQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y++ R   G  + +   +   +AD+A++I AA  L  + A   D  K+     
Sbjct: 257 AYELALKYSKERKAFGTEICNHQAIAFKLADMAVNIEAARHLCMKAAWDKDNHKNYDVSG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG+GY++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLFASQVAMDTAVEAVQIHGGNGYVKEYHVERLMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEKG 461
            + +   +  G
Sbjct: 370 KIVISRAVIAG 380


>gi|120599501|ref|YP_964075.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|146292501|ref|YP_001182925.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|120559594|gb|ABM25521.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
 gi|145564191|gb|ABP75126.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
 gi|319425805|gb|ADV53879.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 385

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 143/394 (36%), Gaps = 27/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A     +     P   +WD+    P    +++++   G        S   +
Sbjct: 7   DDQRQFADLARQFAAE--ELTPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGGM 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                   +++    +  MV    T  + + W+            
Sbjct: 63  GLSRLDASIIFEELAKGCTATTAMLTIHNMATWMVTTWGTETLRQTWSE----------- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++ 
Sbjct: 112 --PLTTGQMLASYCLTEPGAGSDAASLQTKAVRDGDE-YVISGSKMFISGAGATELLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G+ G   +  +       G+ Y + ++K+G  +  T ++ F N    +   L     
Sbjct: 169 CRTGQAGPKGISAIAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A 
Sbjct: 229 GFAFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D           A     + K +   +   V   A++  GG GY
Sbjct: 289 ELVAARQMVRLAAFKLDSGDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  + RH+R+   + IL G+   M L +   L
Sbjct: 343 IREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|63101332|gb|AAH94479.1| LOC734152 protein [Xenopus laevis]
 gi|77748232|gb|AAI06211.1| LOC733389 protein [Xenopus laevis]
 gi|122936449|gb|AAI30051.1| LOC733389 protein [Xenopus laevis]
          Length = 417

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 138/378 (36%), Gaps = 27/378 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
             GP     D+        +  ++    G+        +         H +    +  ++
Sbjct: 55  HLGPIANEIDQKNDFAEMKSFWKKLGELGVLGITAPVEYGGSAMGYLEHVLVMEEISRVS 114

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         + + PK+ S E+                L ++E
Sbjct: 115 GAVGLSYGAHSNLCINQIVRNANEAQKEKYLPKLISGEH-------------IGALAMSE 161

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLL 262
              G+D+ ++  + +K  D  Y L+G+K W  + P +D  ++ A+ +  V     +   L
Sbjct: 162 PNSGSDVVSMKLKAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDLSVQPARGITAFL 220

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +    G    +  +K+G R + T EL F +        L      V  +   + L+  +
Sbjct: 221 VEKGTPGFSTAQKLDKLGMRGSNTCELVFEDCKIPKENILGHLGKGVYVLMSGLDLERLV 280

Query: 323 MS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +S   +  M+  L  AI Y   R   G  +    +M+  +AD+   +AA     + +A +
Sbjct: 281 LSGGPLGIMQAVLDHAIPYMHTREAFGQKIGHFQLMQGKMADMYTRLAACRHYVYNVAKA 340

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+  +  ++             +  + A  V  + ++C+GG+GYI +  + R  R++  
Sbjct: 341 CDQGHADPKD-------CAGVILYSAESATQVALDGIQCLGGNGYINDYPMGRFLRDAKL 393

Query: 440 NSILLGSGNAMVLDVLNL 457
             I  G+     + +   
Sbjct: 394 YEIGAGTSEVRRIIIGRA 411


>gi|68536494|ref|YP_251199.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68264093|emb|CAI37581.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 385

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 121/350 (34%), Gaps = 19/350 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G +       +          +            +  + + +      + L  +  + 
Sbjct: 50  AAGFNAIHVPEEYGGQGGDSLAAVIVIEEVARVCGSSSLIPAVNKLGTMGLILQGSEELK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K+  P I +                     LTE+  G+D  A+ ++  +  D        
Sbjct: 110 KEVLPDIANG--------------AMASYALTEREAGSDAGAMKTRAVRDGDEWVINGSK 155

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   S  + ++A  +   G   +   + +    G      ++K+G + + T EL F
Sbjct: 156 CFITNGGKSTWYTVMAVTDPEAGARGISAFMVNKDDPGFSVSGYEHKLGIKGSPTAELLF 215

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +       ++G+                      ++   + +  +A+ Y + R   G  
Sbjct: 216 EDCRVPASRMIGEEGTGFKTALQTLDHTRPTIGAQALGIAQGAFDQAVAYVKERKQFGKA 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + D    +  +AD+ + I AA  + +  A++ +     +E+ A   +MA  +K +   +A
Sbjct: 276 IADFQNTQFMLADMKMKIDAARLMIYTAASNAERG--VAEDGAKLGLMAAGSKAFASDVA 333

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++ +GG G+  +  + R  R++    I  G+     + +   +
Sbjct: 334 MEVTVDAVQLLGGYGFTRDFPLERMMRDAKITQIYEGTNQICRMVMGRQI 383


>gi|330960953|gb|EGH61213.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 387

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/401 (15%), Positives = 141/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            L    +    QL ++      P   + D+    PA   + R+    G+        +  
Sbjct: 9   ALGETIDMLRDQLQSFVAAELSPRAAQIDRDNLFPA--DMWRKLGEMGVLGITVSEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   A    + S    + +     P     + P++ S E+  
Sbjct: 67  AGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPRLVSGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D +++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLRADKRGDRYILNGSKTWITNGPDADTYVI 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G       +K+G R + T EL F +        L   
Sbjct: 174 YAKTDLAKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGAL 233

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++  +AD+
Sbjct: 234 DCGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG+
Sbjct: 294 YTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALDAIQILGGN 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 347 GYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|332716275|ref|YP_004443741.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325062960|gb|ADY66650.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 375

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 140/397 (35%), Gaps = 35/397 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +++AR             PG    D+    P     L+     G    +    +   
Sbjct: 8   QQIRDMARDFAR-----ERLAPGASARDRESRFP--KDELKEMGELGFLGMLVSEDYGGS 60

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A             +MS   +   +  L   T    + + PK+ S E+   
Sbjct: 61  ETGAVAYALALEEIAAGDGACSTIMSVHNSVGCVPILKFGTAEQKQRFLPKLASGEW--- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                       G  LTE + G+D + + ++ ++  D        ++  S    D  I+ 
Sbjct: 118 ----------IGGFALTEPQAGSDASNLKTKARRDGDRYIIDGAKQFITSGKNGDVIIVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    R++ K+G  S+ T ++ F++       +L +  
Sbjct: 168 AITDPAAGKKGITAFIVPTDTPGYEVIRIEEKLGLHSSDTCQIAFTDMAVP--AELRLGE 225

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIAD 361
                   L  L+   + +S   V +A+A       YAR R   G  +I+   +   +AD
Sbjct: 226 EGQGYRIALANLEGGRIGISAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L    A   +  +    EA+ A       K +  +MA  V ++A++  GG
Sbjct: 286 MATRITAARQLVLHAAALKEAGEPCLSEASMA-------KLFASEMAERVCSDAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 339 YGYMADYPVERIYRDVRICQIYEGTSDVQRMVIARNL 375


>gi|194214228|ref|XP_001914880.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Equus caballus]
          Length = 408

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 143/378 (37%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    PA  A +++    GL                     A           
Sbjct: 51  PIAAQVDREHLFPA--AQVKKMGELGLLAMDVPEDLSGAGLDYLAYAIAMEEISRGCAST 108

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +      L            K  S+E       P           L+E   G
Sbjct: 109 GVIMSVNNSLYLGPIL------------KFGSKEQKQQWITPFTSGDKVGCFALSEPGNG 156

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  + A ++ A  +  +    +   L      
Sbjct: 157 SDAGAASTTARAEGDSWVLNGTKAWITNSWEASATVVFASTDRSLQNKGISAFLVPMPTP 216

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++ 
Sbjct: 217 GLTLGKKEDKLGIRASSTANLIFEDCR---IPKDNLLGEPGMGFKIAMQTLDMGRIGIAA 273

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     A++YA  R   G  L     ++  +AD+AL + +A  L++R A   D 
Sbjct: 274 QALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALALESARLLTWRAAMLKDN 333

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  ++EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    I
Sbjct: 334 KKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEI 386

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L K
Sbjct: 387 YEGTSEIQRLVIAGQLLK 404


>gi|120555661|ref|YP_960012.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325510|gb|ABM19825.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 599

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 85/441 (19%), Positives = 162/441 (36%), Gaps = 53/441 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    QE A+        L+      G  W  D V+    +    ++ +  G      
Sbjct: 37  DMVDAIIQEGAKFCEQVLSPLNQVGDQEGCTWSEDGVKTPTGFKEAYQQYVEGGWPSMTA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   +    G     S  + + +    T    + +  K+ S
Sbjct: 97  DPNYGGQGLPHSIGLVISEMVGTSNWSWGMYPGLSHGATNTIEAHGTEEQKQTYLTKLIS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGSDLGTLRTKAEPNADGSYSITGTKIFISAGEH 203

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++ G       +  F+VP+ L +     G  N +    L++K+G   N
Sbjct: 204 DMAENIVHIVLARLPGAPEGTKGISLFIVPKQLPNEDGSAGERNAVSCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        + +AI  +    +    ++ YA+ R  
Sbjct: 264 ATCVMNFDGAKGWLIGPENKGLNCMFTFMNTARIGTAIQGLGSAELGFQGSLAYAKERLA 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +    +    A AL +      D        + R
Sbjct: 324 MRSLSGPKNPDGIADPIIVHPDVRRMLLTQKVVAEGARALIYLAGQQVDVVHSGKTEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    + PI K +  ++        M+  GG GYI E  + ++ R+S    I  G+
Sbjct: 384 KHADALLGFLTPIAKAFLTEIGYESANLGMQVFGGHGYIAEWGMEQNVRDSRIGMIYEGT 443

Query: 447 GNAMVLDVLN---LLEKGTNL 464
                LD+L    L+ +G  L
Sbjct: 444 TGIQALDLLGRKVLMTQGEAL 464


>gi|158520643|ref|YP_001528513.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509469|gb|ABW66436.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 386

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 146/376 (38%), Gaps = 27/376 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P    L R+    G     +   F          I      +  
Sbjct: 30  KEITPFVDEWERAGEFP--RDLYRKMGDLGFLGIGFPEDFGGSGGDIFSTIVLNEEMMRC 87

Query: 145 QLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                     S       +A+  TP     +               P+        LG+T
Sbjct: 88  GAAGIVAGLGSHGIGLPPIAMKGTPDQVDRFV-------------RPVLAGEKIAALGIT 134

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E  GG+D+A + +   +  D  Y ++G K F++S +    +  A   G  G   +  L+ 
Sbjct: 135 EPGGGSDVANLQTTAVRDGDD-YIVNGSKTFITSGIRADQLTCAVRTGDKGAHGISFLVI 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           +    G    R   K+G  ++ T E+ F N    +   +G+ N     + +   +  L  
Sbjct: 194 EADTPGYATGRKLEKMGWLASDTGEIFFDNCRVPVANRIGEENSGFYTIMENFQMERLHL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +M+    +++L E+I YA++R   G  L    V +  + D+A  + A+   ++R+A   
Sbjct: 254 CVMANMTAQLALEESIKYAKQRQAFGKPLKGFQVTRHKLVDMATLVEASREFTYRVAAKM 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +++ +E         + K + C+++  V  +A++  GG GY++E  + R YR++   
Sbjct: 314 NAGQNQVKE-------ISMAKNFACQVSDKVTYDAVQIFGGYGYMKEYMVERLYRDNRIL 366

Query: 441 SILLGSGNAMVLDVLN 456
           SI  G+   M   + N
Sbjct: 367 SIGGGTTEIMKEIIAN 382


>gi|53717539|ref|YP_105514.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|67640043|ref|ZP_00438865.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121597540|ref|YP_990151.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124383081|ref|YP_001024469.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126447430|ref|YP_001078791.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|167001442|ref|ZP_02267239.1| acyl-CoA dehydrogenase [Burkholderia mallei PRL-20]
 gi|254174101|ref|ZP_04880763.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|254204240|ref|ZP_04910599.1| acyl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|254209209|ref|ZP_04915556.1| acyl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|254355505|ref|ZP_04971785.1| acyl-CoA dehydrogenase [Burkholderia mallei 2002721280]
 gi|52423509|gb|AAU47079.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|121225338|gb|ABM48869.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124291101|gb|ABN00371.1| acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126240284|gb|ABO03396.1| acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147745124|gb|EDK52205.1| acyl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|147750432|gb|EDK57502.1| acyl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|148023598|gb|EDK82660.1| acyl-CoA dehydrogenase [Burkholderia mallei 2002721280]
 gi|160695147|gb|EDP85117.1| isovaleryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|238520688|gb|EEP84146.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|243062761|gb|EES44947.1| acyl-CoA dehydrogenase [Burkholderia mallei PRL-20]
          Length = 393

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 129/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVAEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKRRYLPKLISGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +             W  + P  D  ++ A+ E   G   +   + +   
Sbjct: 137 GSDVVGMKLRAEPRGARYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELNGGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  IAD+     A  A  + +    D   
Sbjct: 257 TGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAYLYAVGRHLDAGG 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S        R        +  + A  +  EA++ +GG+GYI E S+ R +R++    I  
Sbjct: 317 SAHPRQ--VRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYSVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|71279027|ref|YP_267408.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71144767|gb|AAZ25240.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 388

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 132/380 (34%), Gaps = 27/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P   A+ +++   G            +   +           +     
Sbjct: 26  PFASEWDEKKIFP--KAMFKKAGELGFMGMYCPEDVGGMNLPRLDTSIILEELAVGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    ++ M++   T    + W   +                       LTE   G
Sbjct: 84  AAFISIHNMASWMISTWGTESTKQQWCDDLVMG-------------QKLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           +D  ++ +  +K  D  Y L+G K F+S    +D  +++A+      G   +        
Sbjct: 131 SDAGSLRTTAKKDGD-YYLLNGSKMFISGAGETDVLVVMARTGSQEEGAKGISAFAVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+ Y + ++K+G  S  T  + F N        L     G    MK L    ++ A  
Sbjct: 190 LAGVSYGKNEDKMGWNSQPTRAISFENAKLPADCLLGAEGEGFKIAMKGLDGGRINIASC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   +  +  +  Y + R   G  L     ++  +AD+  ++ AA  +    A+  D  
Sbjct: 250 SIGAAQACIDLSQAYMQERKQFGKPLAAFQALQFKLADMVTELVAARQMIRLAASKIDIN 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                          + K +   +   V  +A++  GG GYI+E  I R+ R++  + IL
Sbjct: 310 DPDK------STYCAMAKRFATDVGFNVCNDALQLHGGYGYIKEYPIERYMRDARVHQIL 363

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+   M +     + +   
Sbjct: 364 EGTNEIMRVITARRILEEGA 383


>gi|11498048|ref|NP_069272.1| acyl-CoA dehydrogenase (acd-2) [Archaeoglobus fulgidus DSM 4304]
 gi|2650189|gb|AAB90797.1| acyl-CoA dehydrogenase (acd-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 382

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 133/371 (35%), Gaps = 26/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E  D+ E +P    ++R++   G         +  +      +      +       G+ 
Sbjct: 30  EECDREEKYPM--EIVRKARDLGFSTVKIPEEYGGMGLSLFEEALVTEEFYRVSPGIGNA 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S     ++ L  +    + +                + +      +  TE   G+D+
Sbjct: 88  CLSSTFGTELLILFGSEEQKEKYL-------------RWVTERHGISAMATTEPEAGSDV 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGL 270
           A + ++  K  D         +  +  + D  ++L +  EG      +   + +    G 
Sbjct: 135 ANVKTKIVKEGDEWVINGTKMFITNGTVCDFVLVLGRTYEGEKRHHGLTFAIVESKSKGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              ++KNK+G R++ T E+   +        LG+       + +         A  +V  
Sbjct: 195 KATKIKNKLGLRASDTAEIVLKDVKVPEENILGEPGKGFYYLMEFFNHTRPRVAAQAVGI 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +   A++Y ++R   G  +      +  IA++A  I AA  L+++ A      +SR 
Sbjct: 255 AQGAFELALNYVKQRKQFGQPIAAFQHTQFKIAEMATRIQAARLLTWQAAWQCSIGQSRP 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       ++ + K++  + A  V    ++  GG GYI E    R+YR++    I  G+ 
Sbjct: 315 E-------LSSMAKWFAGETAVYVADWCVQLHGGYGYIGEYPAERYYRDAKLMEIYEGTK 367

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 368 EVQKQIIARRL 378


>gi|317124404|ref|YP_004098516.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315588492|gb|ADU47789.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 389

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 137/397 (34%), Gaps = 26/397 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
              E  R A     +     P     D+   +P         +            ++ V 
Sbjct: 15  EDHEALREAVRAVAE-DKIAPYAAAVDEEARYP--QEAHDALVASDFFAPHVPEEYDGVG 71

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                              A  + + +   +  + L  +  V + + P +   E      
Sbjct: 72  ADALATCIVIEEVARVDASACLIPAVNKLGSLPLILAASEDVKRRYLPPLAHGE------ 125

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                       GL+E+  G+D A++  + ++  D         W  ++ +S+ + +LA 
Sbjct: 126 -------TTFSYGLSEREAGSDTASMKCRARRDGDDWVLNGQKSWITNAGVSEYYTVLAV 178

Query: 249 VEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
            +        V   + + S  G  +   + K+G + + T EL F N        +  V  
Sbjct: 179 TDPDGPRGNNVTAFVVEKSDAGFTFGEKERKLGIKGSPTRELHFDNVRIPGDRVVGEVGD 238

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    ++ L    +     ++   + +L +A+ Y + R   G  + D   ++  +AD+A+
Sbjct: 239 GLKIALRTLDHTRVTIGAQAIGIAQGALDQAVAYVKERKQFGKRIADFQGIQFMLADMAM 298

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  + +  A   +                   K +   +A  V  +A++ +GG+GY
Sbjct: 299 EVEAARQMVYVAAAKSERGDKD------LTFFGAAAKCFASDVAMKVTTDAVQLLGGAGY 352

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            ++  + R  R++    I  G+     + +   L KG
Sbjct: 353 TKDFPLERMMRDAKITQIYEGTNQIQRVVMARQLLKG 389


>gi|281347553|gb|EFB23137.1| hypothetical protein PANDA_018993 [Ailuropoda melanoleuca]
          Length = 396

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 140/375 (37%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   A +++    GL        F            A           
Sbjct: 40  PIAAQVDKEHCFPT--AQVKKMGELGLLAMDVPEEFSGAGLDYLAYAIAVEEISRGCAST 97

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +      L            K  S+E       P           L+E   G
Sbjct: 98  GVIMSVNNSLYLGPIL------------KFGSKEQKQQWITPFTGGDKIGCFALSEPGNG 145

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  + A ++ A  +  +    +   L      
Sbjct: 146 SDAGATSTTARAEGDSWVLNGTKAWITNSWEASAAVVFASTDRSLQNKGISAFLVPMPTP 205

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL   + ++K+G R+++T  L F +       LLG+  +          +  +  A  ++
Sbjct: 206 GLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGEPGMGFKIAMQTLDMGRIGIASQAL 265

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A++YA  R   G  L     ++  +AD+AL + ++  L++R A   D  K 
Sbjct: 266 GIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMALALESSRLLTWRAAMLKDNKKP 325

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++EAA A++ A        + A AV  +A++ +GG GY+ E    RHYR++    I  G
Sbjct: 326 FTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGYVTEMPAERHYRDARITEIYEG 378

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L K
Sbjct: 379 TSEIQRLVIAGHLLK 393


>gi|254691350|ref|ZP_05154604.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|256256535|ref|ZP_05462071.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260756960|ref|ZP_05869308.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260882772|ref|ZP_05894386.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297249891|ref|ZP_06933592.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|260677068|gb|EEX63889.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260872300|gb|EEX79369.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297173760|gb|EFH33124.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 384

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKMLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|17506239|ref|NP_491871.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis
           elegans]
 gi|14573994|gb|AAK68275.1|AC006625_7 Acyl coa dehydrogenase protein 1, isoform a, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 427

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 130/357 (36%), Gaps = 31/357 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPR 169
             +GL        +        + +               ++    T   SM+    T  
Sbjct: 89  FENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEE 148

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               + P++ S                     ++E   G+D  A+ +  ++  D      
Sbjct: 149 QKLKYLPRLCS--------------DSLASFCISESGAGSDAFALKTIAKRDGDHFLISG 194

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +S  +  F++ A  +       +   + + S +GL   + ++K+G R+++T ++
Sbjct: 195 TKMWITNSGEAQVFVVFANADPSQKYKGITCFIVERSADGLTVDKEEDKLGIRASSTCQV 254

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRH 343
            F N          +     +  K  I  L++  +++    + LA+        Y ++R 
Sbjct: 255 HFDNVRVHKSA---ILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQRE 311

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LID   ++  IA    +I AA  L +  A   +       EAA A       K +
Sbjct: 312 QFGQRLIDFQGLQHQIAQARTEIEAARLLVYNAARMKEYGIPYVREAAMA-------KLF 364

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++A +  A+ ++ +GG G+ +E    + YR++    I  G+ N  +  +  L++ 
Sbjct: 365 ASQVATSTSAQCVKWLGGVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDN 421


>gi|257388115|ref|YP_003177888.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170422|gb|ACV48181.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 385

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 143/380 (37%), Gaps = 27/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D  E +P    ++ ++   GL  +     +  V          A     A    
Sbjct: 26  PDATEYDTEEKYP--REIVEQAAEIGLTGANIPVEYGGVGYDTLTNAIIAEELFAADPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +   A  +    T    + +               P+      +G  ++E   G
Sbjct: 84  GLCIQSTAFGADALVGFGTEEQKEAFLE-------------PVATGDAIMGAAISEPDVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+++++++ +K  D         W  +  + D F++L + +           +++ +  
Sbjct: 131 SDVSSVSTRAEKDGDEWVINGNKMWITNGSIGDYFVVLCKTDPEAEGRYNGFSQIVVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G    ++  K+G R++ T EL   +        +     G ++ M+         A  
Sbjct: 191 RDGFEADKITGKLGIRASDTAELILDDVRVPEENLVGTRGAGFLQLMQFFDETRTGVAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + +   A+ YA  R      + +   ++  ++++   + AA  L+++ A S D  
Sbjct: 251 AVGIAKGAAERALDYAEDREQFSKPISEFQAIQHKLSEMHTQVEAARMLTYKSAWSVDN- 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E     ++A + K +  ++A  V  EA++  GG+GY+ +  + R YR++    I 
Sbjct: 310 -----EDDQLTMLASMAKEFASRVAVEVADEAVQIHGGAGYVNDFDVERFYRDAKITQIY 364

Query: 444 LGSGNAMVLDVLN-LLEKGT 462
            G+       +   LL KG 
Sbjct: 365 EGTSEIQKNIIARELLGKGM 384


>gi|167032850|ref|YP_001668081.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859338|gb|ABY97745.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 375

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 140/398 (35%), Gaps = 28/398 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +++   Q++A              P  E+WDK    P     +      GL   +    +
Sbjct: 2   LVTDEQQQIADAVRTFA--QERLRPLAEQWDKEHRFP--KEAIDEMAELGLFGMLVPEQW 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
                       A             +MS   +   +  L   T +    +   + S   
Sbjct: 58  GGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGTEQQKARFLTPLASG-- 115

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                      ++     LTE + G+D +++ ++ +   D        ++  S   +   
Sbjct: 116 -----------AMLGAFALTEPQAGSDASSLKARARLDGDHYVLTGSKQFITSGQNAGVV 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R+++K+G  ++ T ++ F N    ++  L 
Sbjct: 165 IVFAVTDPDAGKRGISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVRVPVVNRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  +V   R +   A  YA  R   G  LI+   +   +A
Sbjct: 225 AEGEGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  IA A  +    A   D  +    EA+ A       K +  +MA  V ++A++ +G
Sbjct: 285 DMATKIAVARQMVLHAAALRDAGRPALVEASMA-------KLFASEMAEKVCSDALQTLG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 338 GYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIARNL 375


>gi|84683803|ref|ZP_01011706.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84668546|gb|EAQ15013.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 592

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/530 (18%), Positives = 184/530 (34%), Gaps = 76/530 (14%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           S   +E A++++     L+      G + +   V     +     +    G      D  
Sbjct: 38  SAILEEAAKISSEVLAPLNRVGDLEGCKLENGVVRTPTGFKDAFDQVRDGGWTGLDCDPE 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +                   + +        +  + S +    T    + + P + + ++
Sbjct: 98  YGGQGLPHVIGSAVGEFLTASNMAFNMYQGLTHGAYSAIHAHGTDEQKQTYLPNMVTCQW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   GTD+  + ++ +   DG Y +SG K F+S+   D  
Sbjct: 158 TGT-------------MNLTEPHSGTDLGLMRTKAEPQEDGTYKISGQKIFISAGDHDMS 204

Query: 243 ----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++ G       V  F+VP+ L       G  NG+    L+ K+G   NAT 
Sbjct: 205 ENVIHLVLAKIPGGPDGIKGVSLFIVPKFLVKEDGSLGERNGVSVGALEEKMGIHGNATC 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            + +    G+LLG  +     +  M     L   +  +     +   A+ YAR R     
Sbjct: 265 VMNYDEATGYLLGTEHKGMRAMFTMMNEARLGVGVQGLGQATAAYQNALEYARDRLQGRA 324

Query: 348 ------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393
                        +I  P ++RA+ D    I  A A     A   D ++   +E A    
Sbjct: 325 VTGVEAPDKPADPIIVHPDIRRALLDQKSFIEGARAFVLWSAELIDRSQRNGDEEAEGLV 384

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +          +A +  GG GYIEE  +++  R+S    I  G+     LD
Sbjct: 385 SLIIPVLKGFLTDKGLESAVQAQQVFGGHGYIEEWGMSQFVRDSRIAMIYEGANGIQALD 444

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA-- 511
           ++                L QD G        +++  I   + ++ L     + +  A  
Sbjct: 445 LVG-------------RKLAQDGGKHVMGFFEMIKSFIKENEGNEALKADFLDPLKDASK 491

Query: 512 -SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
               AA++          F++N   +  H     L G ++   +   + L
Sbjct: 492 DLQGAAMF----------FMQNGMKNPNH----ALAGSYDFMTMFGHVVL 527


>gi|254500145|ref|ZP_05112296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436216|gb|EEE42895.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 603

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/553 (18%), Positives = 203/553 (36%), Gaps = 71/553 (12%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGL 115
             LG+ ++     E  R A      L++     G   +  +V   P W  L    I  G 
Sbjct: 39  TELGDDLVDAILNEAGRFAAEEIAPLNSVADKHGTPLENREVTTPPGWRELYHGWIEGGW 98

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKD 173
           +              Q   + AA L +         + P++T  ++ A+    T  +   
Sbjct: 99  NGLSASEEAGGQGLPQ--MLSAAALEMWNSGSMAFAIGPTLTMGAVEAIEKHATEELRAT 156

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K+ + ++  T             + LTE + G+D+ A+ ++ ++  DG Y + G K 
Sbjct: 157 YLEKLVTGQWMGT-------------MNLTEPQAGSDLNALKARAERNDDGTYRVYGQKI 203

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA++         +  FLVP+ L +     G+ N +    +++
Sbjct: 204 FITYGEHDLTDNIIHLVLARLPDAPAGTRGISLFLVPKFLVNEDGSLGARNDVHCAGVEH 263

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G   + T  + + +     G+L+G+ N     +  M     L   I  +     +  +
Sbjct: 264 KLGIHGSPTCTMVYGDEGGATGWLIGEENKGLACMFTMMNNARLAVGIQGLGVAERACQD 323

Query: 335 AIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           A  YA  R               +   P +KR++  +      A A+ +  A++ D A +
Sbjct: 324 AHAYALERKQGNVPGKKGDGMVAIAHHPDIKRSLLGMRTRTQVARAICYSCAHAIDMADT 383

Query: 386 RSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++       +  A ++ PI K         V    ++  GG GY+EE  +A+H R++  
Sbjct: 384 ATDPDQKKHWSERAGLLTPIAKALSTDFGVEVATIGVQIHGGMGYVEETGVAQHLRDARI 443

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQL---FSTLEQDLGSSGK----KVITILRDS 490
             I  G+       L +  L   G +           + +++  S +         LR +
Sbjct: 444 APIYEGTNGIQSIDLVLRKLPLSGGDHVRGFLTELREIAREVSQSNRPEFGDTAERLRRA 503

Query: 491 ISLCKE--DKGLARFLTEKIALASSAAALY------RAGMNDIADVFLENRFLDNCHSTH 542
           +   +E  D  LA     ++  A S A  Y        G   +A   L++   +    T 
Sbjct: 504 LDDLEEATDWMLAAQADGRVEEALSGATPYLRLAGLAYGGALLAKGALKSGMENRALRTQ 563

Query: 543 CMLHGRFNAAHII 555
             +  R  A  ++
Sbjct: 564 RTIMARSYAMTLL 576


>gi|290969187|ref|ZP_06560712.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780693|gb|EFD93296.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L]
          Length = 380

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/399 (22%), Positives = 155/399 (38%), Gaps = 38/399 (9%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   QEL R+            P     D+ E FH     L+ +    GL   +    + 
Sbjct: 7   TEEQQELIRVVRELVA--KEIAPYAAEMDETEKFHDG---LMEKLAAQGLFSVVIPEEYG 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                       A        E G   +   T+ +  AL + P +       I   E   
Sbjct: 62  GAGLD-------ALTIAALYEEIGKGCAGVATTVAANALASYPVI-------IAGTEAQK 107

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAF 243
                +          LTE   G+D  +++++  K  DG  Y L+G K F+++  +++ F
Sbjct: 108 KKYFDVLAEGNLAAFALTEPGTGSDAGSVSTRAVKTEDGKGYVLNGTKCFITNGALAEMF 167

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A      G   +   +      G    + +NK+G RS+ T EL F + F      L 
Sbjct: 168 VVFANTRKTGGIRGLTAFIVRKGTPGFTVGKAENKMGIRSSNTTELIFQDCFVPAEDRLG 227

Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
                 +  +I +  LD+A   V  + V +AEA       YA+ R   G  +    +++ 
Sbjct: 228 REG---QGFRIAMNTLDAARPLVGAVSVGIAEAAFRACSEYAKVRVQFGKPIASFEMVQS 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A++I AA  +  +     D+    S +AA        +K +   +A  V   A++
Sbjct: 285 MIADMAIEIEAARMMVQKACWMKDQGLDFSRQAAM-------SKCYASDVAMRVTTNAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +GG GYI+E  + ++ R++    I  G+     L + N
Sbjct: 338 VMGGYGYIKEYPVEKYMRDAKIMQIYEGTNQIQRLVIAN 376


>gi|152986519|ref|YP_001348996.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961677|gb|ABR83702.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 384

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 134/365 (36%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++R A  L   +      L + +   +  + 
Sbjct: 39  AIVARMREMGLFGLSIPEAYGGLGVTMEEEVRIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P++ S E             +     LTE   G+D A++ +   +  +
Sbjct: 99  IDGTEEQKRRYLPRLASGE-------------LLSSFCLTEPDSGSDAASLKTTALRDGE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+ +  + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGIGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|86749241|ref|YP_485737.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86572269|gb|ABD06826.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 382

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 142/377 (37%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+ +  P    ++R++   G+               +             
Sbjct: 23  EKIAPHALQWDEDKHLPL--DVIRQAAALGIGGIYIRDDVGGSAMTRFDAALIFEALAEG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +A M+    +    + W PK+ S E             +     LTE
Sbjct: 81  CPAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSME-------------LIASYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++     D  Y L+G K F+S   ++   ++    G  G   +  L+ D
Sbjct: 128 PGSGSDAAALRTRAVIDGDH-YVLNGQKQFISGAGANDLYVVMVRTGGDGPGGISTLVVD 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T  + F N    +   LGD  +             L+  
Sbjct: 187 KDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDGGRLNIG 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L++A+ Y + R   G  L +   ++  +AD+A ++ AA  L +R A + D
Sbjct: 247 ACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A  +  + K +       V  +A++  GG GY+ E  + +  R+   + 
Sbjct: 307 RKD------ADATKLCAMAKRFATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQ 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 361 ILEGTNEIMRLIVSRKL 377


>gi|88813675|ref|ZP_01128903.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88789062|gb|EAR20201.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 387

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 151/410 (36%), Gaps = 37/410 (9%)

Query: 60  LLGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            LGE +  L  + +E A  AN   P+        +  D+    P   AL  +    GL  
Sbjct: 9   ALGEELDMLRGSVREFA--ANEIAPR-------ADAIDRTNTFP--RALWPKLGEIGLLG 57

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAP 176
              +  +         +I A      A    G    + +    + +    TP     + P
Sbjct: 58  ITVEEEYGGSAMGYLAQIIAMEEISRASASVGLSYAAHANLCVNQIRRHGTPAQKHAYLP 117

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+                L ++E   G+D+ A+  +  K  D         W  +
Sbjct: 118 KLLSGEH-------------VGALAMSEPGAGSDVVAMRLRADKQGDHYRLNGTKMWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            P +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++   
Sbjct: 165 GPEADTLVVYAKTDPAAGSKGITAFIVERGYQGFDTAQKLDKLGMRGSDTCELVFADCRV 224

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG+ N   G +           A   +  M+  L  A+ Y   R   G  + +  
Sbjct: 225 PAENVLGEENAGVGVLMSGLDYERAILAAGPLGIMQACLDTALPYTHERQQFGQPIGEFQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + A  A  + +  + D   +  ++AA A         +  + A  +  
Sbjct: 285 LIQAKLADMYTHLQACRAYVYAVGAACDRNDATRKDAAGA-------ILYAAERATQMAL 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           EA++ +GG+GYI E  + R  R++    I  G+     + +   L + + 
Sbjct: 338 EAIQILGGNGYINEYPVGRLLRDAKLYEIGAGTSEIRRMLIGRELFRESA 387


>gi|328544859|ref|YP_004304968.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414601|gb|ADZ71664.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 385

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 151/414 (36%), Gaps = 43/414 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P+ + ++  LL +      AQE+A       P   +Y   G+        P    L R++
Sbjct: 9   PAWLDEDCSLLDDAFARFLAQEVA-------PDYESYVENGK------VTP---ELWRKT 52

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G  C      +       AH         +   +   +   S   A  +    +   
Sbjct: 53  GEAGFLCPAVPEEYGGAGGSFAHDSVIIHRLGVDGFDHFGIALHSAIVAPYIQHYGSQEQ 112

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P + +              +    + +TE   G+D+  I +  +K  +  Y ++G
Sbjct: 113 KQRWLPGLVAG-------------TSIGAIAMTEPGAGSDLQGIKTTARKDGNH-YVING 158

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVE 288
            K F+++   ++  I++A+ +  +G   V  L+ +     G    R  +KIG + N T E
Sbjct: 159 SKTFITNGQLANLIIVVAKTDPSLGAKGVSLLVVETDKVEGFRRGRNLDKIGLKGNDTSE 218

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F +        L  +       + +      L  A  +++ +  +L   + Y + R  
Sbjct: 219 LFFEDVRVPADALLGAEEGRGFYQLMEQLPQERLLVACQAMAAIERALTVTLDYVKERKA 278

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++D    +  +A++  +               ++  +R        + A + KYW 
Sbjct: 279 FGKAILDFQNTQFKLAELKTEATIGRVFV-------NDCIARHIAGGLDSVTASMAKYWT 331

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   V+ E ++  GG GY+ E  IAR Y ++    I  G+   M + +   L
Sbjct: 332 TDLQCKVMDECLQLHGGYGYMNEYPIARLYADARVQRIYAGTNEIMKVLIARSL 385


>gi|77459092|ref|YP_348598.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77383095|gb|ABA74608.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 375

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 70/395 (17%), Positives = 135/395 (34%), Gaps = 31/395 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +++AR   +   +L    P    WD+    P     +      G    +    +   
Sbjct: 8   QQIRDMARQ--FAEERLK---PFAAEWDREHRFP--KEAIGEMAGLGFFGMLVPEQWGGC 60

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A             +MS   +   +  L        + +   + S E    
Sbjct: 61  DTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPILKFGNDDQRERFLKPLASGEM--- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                          LTE + G+D +++ ++ +   D        ++  S   +   I+ 
Sbjct: 118 ----------LGAFALTEPQAGSDASSLKTRARLEGDHYVLNGCKQFITSGQNAGIVIVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A  +   G   +   +      G    R+++K+G  ++ T ++ F +    +   L    
Sbjct: 168 AVTDPSAGKRGISAFIVPTDSPGYKVARVEDKLGQHASDTCQILFEDVKVPVANRLGEEG 227

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    +  L    +  A  SV   R +   A  YAR R   G  +I+   +   +AD+A
Sbjct: 228 EGYKIALANLEGGRVGIASQSVGMARAAFEAARDYARERDTFGKPIIEHQAVAFRLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             IA A  +    A   D  +    EA+ A       K +  +MA  V + A++ +GG G
Sbjct: 288 TQIAVARQMVHYAAALRDSGQPALVEASMA-------KLFASEMAEKVCSMALQTLGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YLNDFPLERIYRDVRVCQIYEGTSDIQRMVISRNL 375


>gi|56461063|ref|YP_156344.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
 gi|56180073|gb|AAV82795.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR]
          Length = 594

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/576 (16%), Positives = 191/576 (33%), Gaps = 68/576 (11%)

Query: 38  SSDSLLVALIANFPSVVH-KELELLGE-YVLSCTAQELARMA-NYNTPQLHAYGPGGERW 94
             D +L  +           EL  + +         E A++A N   P        G ++
Sbjct: 10  DMDFVLHDVFRVADDWQQTPELADMMDVETAGAILDEGAKVAENLVAPIAREADEEGVKF 69

Query: 95  --DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
              +V     +    R+    G      +  F  +   ++   +   +   A +      
Sbjct: 70  KDGEVTTPKGYKENFRQLAEGGWVGVTANPDFGGMGLPKSLSAQYEEMLCSADIAFSLYP 129

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +  +   +    +  +   + P++ S E+  T             + LTE   GTD+ 
Sbjct: 130 GLTSGAIMAINSHGSDELKNHYLPRMVSGEWTGT-------------MCLTEPHAGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            I S+     DG + LSG K F++    D       ++LA++         +  F+VP+ 
Sbjct: 177 IIRSKAIPAQDGSFSLSGTKIFITGGEHDLTDNIVHLVLAKLPDAPAGTKGISLFVVPKF 236

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           L D        N +    +++K+G  ++AT  + F     +L+G+ +     +  M    
Sbjct: 237 LSDEQGNLTERNNVSCGSIEHKMGIHASATCVMNFDGAKAWLVGEPHRGLPAMFTMMNYE 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIAL 364
            L   I  +     S   A+ YA+ R    G             ++    ++R +  +  
Sbjct: 297 RLGVGIQGLGAAERSYQNALEYAKDRIQGRGAKATRNDQAEADSILVHGDVRRMLLTMKS 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
                 A S  +    D      + + R +  A   ++ P+ K +             + 
Sbjct: 357 LTEGGRAFSTWVGQQLDRSKYAGDDQVRQKADAMVALLTPVAKAFLTDTGLESTIHGQQV 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDL 476
            GG GY+ E    +  R++    I  G+     LD+L     G    L +     ++  L
Sbjct: 417 FGGHGYVREWGQEQLVRDTRIAQIYEGTNGIQALDLLGRKVFGSQGQLLQPFNEEIQSFL 476

Query: 477 GS--SGKKVITILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
               +G + I              G++  + +K A    L +S A  Y   +  ++  +L
Sbjct: 477 DETVTGSEWIKQREQLQQALNILNGVSEEVLQKAAGDENLVNSVAVEYLHLVGYVSYAYL 536

Query: 531 --------ENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
                   E    D  +        RF  A I+  +
Sbjct: 537 WLKMAIAAEPLLSDKPYLATKAKTARFYFARILPRI 572


>gi|313240936|emb|CBY33220.1| unnamed protein product [Oikopleura dioica]
          Length = 411

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 139/384 (36%), Gaps = 28/384 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIR 136
           N+   +L  +    +  D+ +    +     +    GLH       +        AH + 
Sbjct: 44  NFFEAELEPH---ADEADRTDVFKDFRKFWLQCGEMGLHGITSPEEYGGTDMGYFAHTLV 100

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              +  +A   A    + S    + +           + PK+ S E+             
Sbjct: 101 MEEMSRIAGGIALSYGAHSNLCINQIVRNGNAAQKDKYLPKLISGEH------------- 147

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
              L ++E   G+D+ ++  +  K  D         W  + P +D  I+ A+ +      
Sbjct: 148 IGALAMSETGSGSDVMSMKIRADKKGDHWILNGTKMWITNGPTADTMIIYARTDQDCKPA 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDM 312
             +   + DG+ +G    +  +K+G R + T EL F N        LG +      +   
Sbjct: 208 HGITAFIVDGNADGFHCAQRLDKLGMRGSPTGELVFENVAVHEDNILGGIGQGAYVLMSG 267

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L  +   V  M+ +   AI YA  R   G  + +  +++  IAD+   ++A+ + 
Sbjct: 268 LNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLIQGKIADMYTTLSASRSY 327

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++A + D     + +             +  + A  V  +A++ +GG+GYI +    R
Sbjct: 328 LYQVARAADNGHFNNAD-------CAGIILYTAEKATQVCLDAIQILGGNGYINDYPTGR 380

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
             R++    I  G+     L +  
Sbjct: 381 FLRDAKLYEIGAGTSEVRRLIIGR 404


>gi|116624389|ref|YP_826545.1| butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227551|gb|ABJ86260.1| Butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 391

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 137/381 (35%), Gaps = 33/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+         ++++    GL        F          I A       
Sbjct: 34  EQIRPYVREMDEAAVFR--KDIIQQFFTMGLMGIEIPEEFGGQGGTFFQAILAVEELSAV 91

Query: 145 QLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
              AG ++   +    + +    T      + P +  +              +     L+
Sbjct: 92  DPSAGVIVDVQNTICNNALLRWATAEQKAKYLPLLAEK--------------MVASYALS 137

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +   D         W  ++  +  F++ A      G   V   L 
Sbjct: 138 EAGSGSDAFAMATRAEDKGDHFLLTGRKLWITNAAEAGFFLLFANANPEAGYKGVTAFLI 197

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           +    G    + ++KIG R+++T EL   N         NV     +  KI I  L+   
Sbjct: 198 ERDFPGFAVGKKEDKIGLRASSTCELILDNCRVP---RENVMGEVGKGYKIAIETLNEGR 254

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +++    + LA      A+ YAR R   G  + +   ++  +A +A+++ AA  L +  A
Sbjct: 255 IAIGAQMIGLARGALDHAVTYARERKQFGKPIGEFQGVQFDLAKMAVEVEAARLLVYNAA 314

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D       EAA A       KY+  ++A  V ++++E  GG G  ++  + + YR++
Sbjct: 315 RLRDAGLPFLAEAAMA-------KYYSSEIAERVASKSIEVHGGVGITKDYPVEKLYRDA 367

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+ N  ++ +   L
Sbjct: 368 KIGRIYEGTSNIQLMTIAKKL 388


>gi|116049576|ref|YP_791620.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389995|ref|ZP_06879470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584797|gb|ABJ10812.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 384

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 132/365 (36%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++  A  L   +      L + +   +  + 
Sbjct: 39  AIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P++ S E             +     LTE   G+D A++ +   +   
Sbjct: 99  IDGTEEQKRRYLPRLASGE-------------LLSSFCLTEPDSGSDAASLKTTAVRDGQ 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+ +  + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|331015061|gb|EGH95117.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 581

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 93/493 (18%), Positives = 177/493 (35%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWRDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGDPVFGGMGMPKIVSAQVEEMINSASLAFGLYAMLTSGACVSINTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KAKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGMIRTKAEPQTDGAYTITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G+ N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGDDGSLGARNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAVDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA       A ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLAALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q + +S   +    R   +  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFIDTSDSSLGEFTRPLTAAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|71282509|ref|YP_268983.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71148249|gb|AAZ28722.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 606

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 75/449 (16%), Positives = 159/449 (35%), Gaps = 53/449 (11%)

Query: 56  KELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIH 112
           +E E     ++    QE A+   N   P   +    G ++D  KV     +    ++ + 
Sbjct: 29  EEFEEASPDLVDAILQECAKFCENELLPLYQSGDKEGCQFDNGKVITPKGFKEAYQQYVD 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G                 +  +  + +   A          S  + + +      +  +
Sbjct: 89  GGWSSLSHPLEHGGQGLPPSLGLVQSEMTGTANWSWAMYPGLSHGAMNTIDAHGNDKQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  ++    +  T             + LTE + GTD+  + ++ +   DG Y ++G K
Sbjct: 149 LYLTRLIQGTWTGT-------------MCLTEPQCGTDLGQVKTKAEPNGDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLK 276
            F+S+   D       I+LA+  +   G   +   +            G  N +    ++
Sbjct: 196 IFISAGEHDLTDNIIHIVLARLPDAPKGTRGISLFIVPKVKASQDGTLGDFNNVTCGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  L F N  G L+G  N     +        L +A+  V    ++   ++
Sbjct: 256 DKMGIKASATAVLNFDNAVGELIGPENKGLECMFTFMNTARLGTALQGVCSAELAFQNSL 315

Query: 337 HYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-- 382
            YA+ R                  +I  P +++ +           A+ +  A   D+  
Sbjct: 316 IYAKERLSMRSLTGKKFPEQVADPIIVHPDVRKMLMTQKAISEGGRAMIYYTAKIVDDIS 375

Query: 383 ----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                + R         + PI K +  ++        ++  GG GYI+E  + +  R+  
Sbjct: 376 MAKTEEERLAADDRLGFITPILKAFLTELGSESANHGLQIFGGHGYIKEWGMEQIVRDVR 435

Query: 439 ANSILLGSGNAMVLDVLN---LLEKGTNL 464
            +++  G+     LD+L    L+ +G +L
Sbjct: 436 ISTLYEGTTGIQALDLLGRKILMTRGKSL 464


>gi|126643126|ref|YP_001086110.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 567

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 178/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F          +   +  +M        M P 
Sbjct: 32  EVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 89

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 90  LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 137 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 196

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 197 PTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 256

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 257 IGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 316

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AA+           PI K +  ++        M
Sbjct: 317 AEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGM 376

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +  +  + + 
Sbjct: 377 QVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEIL 436

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 437 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 473


>gi|260061799|ref|YP_003194879.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|88785932|gb|EAR17101.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 380

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 110/305 (36%), Gaps = 23/305 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    T    + + P + + E                   L+E   G+D  +  +  
Sbjct: 95  CWGLEAYGTEEQKQKYLPALATGE-------------KIGAFCLSEPEAGSDATSQKTTA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   D         W  +   +D ++++AQ     G   +  L+ +    G      + K
Sbjct: 142 KDAGDHYVLNGTKNWITNGNSADIYLVIAQTYPEKGHKGINALIVEKGMEGFEIGPKEQK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335
           +G R + T  L F++        +     G    MK L    +  A  ++     +   +
Sbjct: 202 LGIRGSDTHSLNFNDVKVPKENRIGADGFGFKFAMKTLSGGRIGIAAQALGIAAGAYELS 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  + +   +   +AD+   I AA  L +R A   D  ++     A A  
Sbjct: 262 LKYSKERKAFGTEIANHQAIAFKLADMHTQIEAARMLVYRAATDKDRGENYDLSGAMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  ++A     EA++  GG+GY++E  + R  R++    I  G+     + + 
Sbjct: 320 -----KLYASQVAMDTAVEAVQIHGGNGYVKEYHVERLMRDAKITQIYEGTSEIQKIVIS 374

Query: 456 NLLEK 460
             + +
Sbjct: 375 RSILR 379


>gi|83941290|ref|ZP_00953752.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
 gi|83847110|gb|EAP84985.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
          Length = 593

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/540 (18%), Positives = 196/540 (36%), Gaps = 76/540 (14%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIH 112
            ELE       S   +E  ++ +     L+A     G R +  V + P  +     +   
Sbjct: 30  DELE---ADFTSAILEEAGKLTSEVLAPLNAVGDQEGCRLENGVVYTPKGFKDAFEKVKE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G         +               ++  +          +  +AS +    +     
Sbjct: 87  GGWTGLDMPEQYGGQNMPYILGTAVGEMFSASNQAFTMYQGLTHGAASAILAHGSDAQKD 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P + S E+  T             + LTE   GTD+  + ++     DG Y ++G K
Sbjct: 147 TYLPNMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+SS   D       ++LA++EG       V  F+VP+ +       G+ N +    ++
Sbjct: 194 IFISSGEHDMADNIIHLVLAKIEGGPEGIKGVSLFIVPKFMVKEDGSLGARNAVSVGSIE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   N+T  + +    G+LLGD +     +  M     +   +  ++   V+   A+
Sbjct: 254 EKMGIHGNSTCVMNYDGAVGYLLGDEHKGMRAMFTMMNEARVGVGMQGLAQADVAYQNAL 313

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  LI  P ++R++ +    +  A A     A+  D A 
Sbjct: 314 AYAKDRLQGRAVTGTEHPDKPADPLIVHPDIRRSLMEQKSFVEGARAFILWGASLIDAAH 373

Query: 385 SRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              ++ A     +M P+ K +   +   +  +A +  GG GYIEE  +++  R++    I
Sbjct: 374 RADDKDADGLVSLMTPVIKGFLTDIGYDMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMI 433

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
             G+     LD++   L + G       F  ++  +  +               ++ +  
Sbjct: 434 YEGANGVQALDLVGRKLAQDGGKHVMAFFDMIKTFIKENAG-------------QDAEFD 480

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           A F+     L +++  L  AGM      F++N       + +  L G  +  H+   + L
Sbjct: 481 ASFME---PLKAASKDLQSAGM-----YFMQN----GMKNPNNALSGSNDFMHMFGHVCL 528


>gi|300933733|ref|ZP_07148989.1| acyl-CoA dehydrogenase-like protein [Corynebacterium resistens DSM
           45100]
          Length = 383

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 74/410 (18%), Positives = 136/410 (33%), Gaps = 39/410 (9%)

Query: 58  LELLGEYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
           L       ++     LA +     A  + P    +    ++ D+         L  ++  
Sbjct: 4   LTDYRSPWMTDELDSLAELTRKFFAKESVPYFEKWAEN-QQVDR--------ELWTKAGQ 54

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL C      +       AH+             A      S   A       +    +
Sbjct: 55  AGLLCLSVPEEYGGGGGSFAHEAVVQYEQAFLGDSAFGNFVHSGIVAPYFTNYASEEQKQ 114

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W PK+ S E+                + +TE   G+D+ +I +  ++  D  Y ++G K
Sbjct: 115 RWLPKLASGEF-------------VGAIAMTEPGTGSDLQSIKTTAKRDGDE-YVINGSK 160

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEF 291
            F+++      I++    G  G   +  ++ +     G    R+ NKIG +   T EL F
Sbjct: 161 TFITNGSHADLIIVVCRTGEEGHAGISLVVVETEGLEGFSRGRVLNKIGMKGQDTRELFF 220

Query: 292 SNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +        L     G +  M+ L    L  A+ +++    ++ + I Y ++R   G  
Sbjct: 221 QDVRVPAENILGEEGKGFIYLMQQLPQERLSIAVGAIAATEAAIQQTIDYTKQREAFGRP 280

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      +  +A+   +  A            D    R          A   KY      
Sbjct: 281 VFKFQNTRFELAECTTEAMAVRTFV-------DHCIQRHVAGELDPATASAVKYLATDKQ 333

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +I   ++  GG GY+ E  IAR Y ++    I  G+   M   +   L
Sbjct: 334 VEIIDRCLQLFGGYGYMLEYPIARAYADARVQKIYGGTNEIMKELISRDL 383


>gi|145589736|ref|YP_001156333.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048142|gb|ABP34769.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 383

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 147/397 (37%), Gaps = 37/397 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR    N  +L  +   GERWD    H  W   A++ +    GL   +    +   
Sbjct: 13  VQDMARDFAKN--ELAPH---GERWD----HEGWIDDAVIAQMGELGLLGMVVPEEWGGA 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A           G +MS   +      L   +    + W  ++ S      
Sbjct: 64  NVDYISYALAVEEISAGDGAVGAIMSIHNSVGCGPILKYGSEAQKEAWLHELASG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IM 245
                          LTE + G++   + ++   + DG + L+G K F+S+       I+
Sbjct: 119 --------RAIGCFCLTEPQAGSEANNLKTRAV-LKDGSWTLNGSKQFVSNGKRAKLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
            A  +  +G   +   L      G    R++ K+G R + T  +   N        L   
Sbjct: 170 FAVTDPELGKKGISAFLVPTDTPGFIVNRVEKKLGIRGSDTCAITLDNCVIPEENILGPR 229

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    +  L    +  A  ++   R +   A+ Y++ R   G  LID P +   +AD+
Sbjct: 230 GKGLAIALSNLEGGRIGIAAQALGIARAAFESALKYSKERIQFGVPLIDHPPIAHFLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L  + A+  +       E       A   K +  +M+  V ++A++  GG 
Sbjct: 290 HTQINAARLLILQAASMKERGLPCLSE-------ASQAKLFASEMSEVVCSKAIQIYGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GY+E+  + R+YR++    I  G+     L +   L+
Sbjct: 343 GYLEDYPVERYYRDARITQIYEGTSEIQRLLIARTLK 379


>gi|254239977|ref|ZP_04933299.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192]
 gi|126193355|gb|EAZ57418.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192]
          Length = 384

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 132/365 (36%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++  A  L   +      L + +   +  + 
Sbjct: 39  AIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P + S E             +     LTE   G+D A++ +   +  +
Sbjct: 99  IDGTEEQKRRYLPLLASGE-------------LLSSFCLTEPDSGSDAASLKTTAVRDGE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+ +  + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|148653859|ref|YP_001280952.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572943|gb|ABQ95002.1| isovaleryl-CoA dehydrogenase [Psychrobacter sp. PRwf-1]
          Length = 395

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 135/380 (35%), Gaps = 20/380 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  +  P    L ++    GLH       +        AH +    +   +   
Sbjct: 31  PRAADIDSSDEFPM--DLWQKMGDLGLHGITVPEQYGGADMGYVAHMVAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIKRNGSESQKQKFLPKLISGEF-------------VGALAMSEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +    G        W  + P +D  ++ A+    +G   +   L +   
Sbjct: 136 GSDVTSMKLRAEAKDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGITAFLVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T E+ F N F      +      V+ +   +  + A+++   
Sbjct: 196 PGFGTAQKLDKLGMRGSHTGEMVFDNVFVPEENIMGGLNNGVQVLMSGLDYERAVLAAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   I Y   R   G  + +  +++  +AD+   + AA +  + +  + D   
Sbjct: 256 VGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAARSFLYTVGKNLDMLD 315

Query: 385 SRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            R    +   R        WC + A  +  E ++  GG+GY  E  + R +R++    I 
Sbjct: 316 KRGAGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYPLGRLWRDAKLYEIG 375

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     + +   L   T 
Sbjct: 376 AGTSEIRRMLIGRELFNETK 395


>gi|184157723|ref|YP_001846062.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876406|ref|ZP_08444175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209317|gb|ACC56715.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322508030|gb|ADX03484.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517616|gb|ADX91997.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735416|gb|EGJ66474.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 600

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 93/542 (17%), Positives = 191/542 (35%), Gaps = 71/542 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           +  +   V++EL       +    +  A         ++      G   ++  V     +
Sbjct: 28  LRKYQESVNREL-------IDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G      D  +         +I  + +   +          S  +   + 
Sbjct: 81  KEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIE 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  + +  K+ S  +  T             + LTE   G+D+  I ++ +   D
Sbjct: 141 HHGTEQQKQKFLTKLISGAWTGT-------------MCLTESHAGSDLGLIRTKAEPNPD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SP 267
           G Y ++G K F+S+   D       I+LA++         +  F+VP+     DG     
Sbjct: 188 GSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSDDGQVLDR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G   NAT  L F    G+L+G  N     +        + +A+  ++ 
Sbjct: 248 NKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAA 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             +S   A+ YA+ R                  +I  P ++  +           AL++ 
Sbjct: 308 SEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIVHPAVRSMLMTQKAFSEGGRALAYF 367

Query: 376 LANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA   D      + + +         + PI K +  +         ++  GG G+I E  
Sbjct: 368 LAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGS 478
           + +  R++  +++  G+     LD+L          LL+  T+L +Q  S  +  + L  
Sbjct: 428 MEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFISQHQSNEVLKP 487

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
             +K+  + +  +SL K     A+   E+I    +A+  Y    + +   +L  R     
Sbjct: 488 YLEKLAELKQQWLSLTKSIAEKAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVA 544

Query: 539 HS 540
           H 
Sbjct: 545 HE 546


>gi|167624790|ref|YP_001675084.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354812|gb|ABZ77425.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 385

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 136/373 (36%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    +++++   G        S   +   +           M     
Sbjct: 26  PFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGGMGLSRLDSSIIFEQLSMGCTAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++    +  MV       + ++W+  + + E                   LTE   G
Sbjct: 84  TAMLTIHNMATWMVTSFGAETLRQEWSESLTTGE-------------KLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  +  D  Y +SG K F+S   +   +++    G  G   +  +       
Sbjct: 131 SDAAALQTKAVRDGDE-YVISGSKVFISGAGATELLVVMCRTGGAGPKGISAIAVPADAA 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y + ++K+G  +  T E+ F N      +LLG+                ++ A  S+
Sbjct: 190 GIIYGKAEDKMGWNAQPTREITFENVRVPASYLLGEEGQGFTFAMKGLDGGRINIATCSI 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L     ++  +AD+A ++ AA  L    A   D+   
Sbjct: 250 GTAQAALERATQYMNERKQFGKPLAAFQALQFKLADMATELVAARQLVRLAAFKLDQQDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   +   V   A++  GG GYI E  + RH R+   + IL G
Sbjct: 310 E------ATAYCAMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERHVRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M L +   L
Sbjct: 364 TNEIMRLIISRRL 376


>gi|254712074|ref|ZP_05173885.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715144|ref|ZP_05176955.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261216854|ref|ZP_05931135.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261319721|ref|ZP_05958918.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|260921943|gb|EEX88511.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261292411|gb|EEX95907.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
          Length = 384

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 136/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + Y   R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYTLDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|313231691|emb|CBY08804.1| unnamed protein product [Oikopleura dioica]
          Length = 411

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 138/384 (35%), Gaps = 28/384 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIR 136
           N+   +L  +    +  D+ +    +     +    GLH       +        AH + 
Sbjct: 44  NFFEAELEPH---ADEADRTDVFKDFRKFWLQCGEMGLHGITSPEEYGGTDMGYFAHTLV 100

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              +  ++   A    + S    + +           + PK+ S E+             
Sbjct: 101 MEEMSRISGGIALSYGAHSNLCINQIVRNGNAAQKDKYLPKLISGEH------------- 147

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
              L ++E   G+D+ ++  +  K  D         W  + P +D  I+ A+ +      
Sbjct: 148 IGALAMSETGSGSDVMSMKIRADKKGDHWILNGTKMWITNGPTADTMIIYARTDQDCKPA 207

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDM 312
             +   + DG+  G    +  +K+G R + T EL F N        LG +      +   
Sbjct: 208 HGITAFIVDGNAEGFHCAQRLDKLGMRGSPTGELVFENVAVHEDNILGGIGQGAYVLMSG 267

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L  +   V  M+ +   AI YA  R   G  + +  +++  IAD+   ++A+ + 
Sbjct: 268 LNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLVQGKIADMYTTLSASRSY 327

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++A + D     + +             +  + A  V  +A++ +GG+GYI +    R
Sbjct: 328 LYQVARAADNGHFNNAD-------CAGIILYTAEKATQVCLDAIQILGGNGYINDYPTGR 380

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
             R++    I  G+     L +  
Sbjct: 381 FLRDAKLYEIGAGTSEVRRLIIGR 404


>gi|182439898|ref|YP_001827617.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780564|ref|ZP_08239829.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178468414|dbj|BAG22934.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660897|gb|EGE45743.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 390

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 142/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD     +    P+   ++L  L   ++S              P+       G       
Sbjct: 2   SDRAPQPVERRLPTEESRQLVALVRDIVSKEI----------APRAAEEEEAG------- 44

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    +       GL    +D +     +     ++       A+L  G  +S    +
Sbjct: 45  VFP--REVFTLLSEAGLLGLPYDSAHGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T          + S               +     L+E   G+D A++ ++ 
Sbjct: 103 CHALAGYGTDEQRAAQLTAMLSG-------------GLLGAYCLSEPASGSDAASLRTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D + +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGDDWVITGTKAWITHGGVADFYTVLART-GVEGPRGITAFLVPGDAEGLNAAVPEKK 208

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  ++   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRVGDDRRIGEEGQGFAIALSALDSGRLGIAACAIGLAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D  +  S +AA A  
Sbjct: 269 VRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRALYLEAARLRDAGEPFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A  V  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|126273321|ref|XP_001376267.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, short/branched
           chain [Monodelphis domestica]
          Length = 389

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 127/359 (35%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MV 162
            +++      GL     +  +          I A             L     T  + ++
Sbjct: 48  KSVIEGLFQQGLMGIEIETKYGGTGASFFSSILAIEELAKVDASVSVLCDIQNTLINTLI 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      +  ++                       L+E   G+D  A+ ++ +K  
Sbjct: 108 RKCGTEEQKATYLIRL--------------AKDTIGSFCLSEAEAGSDAFALKTKAEKKG 153

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++  +  F+++A V   +G   +   + D    GL   + +NK+G R
Sbjct: 154 DYYIINGSKMWISNAEHAGIFLVMANVNPGLGYKGITCFIIDRDTEGLQVGKKENKLGIR 213

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +++T  + F N        LG +         M     +  A   +   +      I Y 
Sbjct: 214 ASSTNTVIFENVKVPETNILGQVGHGYKYAIGMLNEGRIGIAAQMLGLAQGCFDHTIPYL 273

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +     ++   A +A  + AA  L++  A   +  K   +EA+ A      
Sbjct: 274 KERMQFGKTIYSFQGIQHQTAQVATQLEAARLLTYNAARLVENGKPFVKEASMA------ 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            KY+  ++A    ++ +E +GG GY +   + +++R++   +I  G+ N  +  +  LL
Sbjct: 328 -KYFSAEVAGLTTSKCIEWMGGVGYTKNYPMEKYFRDAKIGTIYEGTSNIQLSTIAKLL 385


>gi|315126577|ref|YP_004068580.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913]
 gi|315015091|gb|ADT68429.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913]
          Length = 391

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 132/358 (36%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L  +    G+     D  F         H I    +   +        + S    + + 
Sbjct: 49  QLWPQMGEMGVLGMTVDEEFGGAGLGYLEHVIAMEEISRASASIGLSYGAHSNLCVNQIN 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                L ++E   G+D+ ++  + +K  D
Sbjct: 109 RNGSQAQKEKYLPKLISGEH-------------IGALAMSEPNAGSDVVSMKLKAEKKGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   + + +  G    +  +K+G R 
Sbjct: 156 KYILNGNKMWITNGPDADTLVIYAKTDLNAGAKGITAFIVEKTFPGFSTAQKLDKLGMRG 215

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F N        LG+LN     +        +  A   +  M+  +   + Y  
Sbjct: 216 SNTCELVFDNCEVPEENILGNLNEGVKVLMSGLDYERVVLAAGPLGIMQACMDIVVPYIH 275

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  IAD+   + AA +  + +A + D  ++  ++AA A       
Sbjct: 276 ERKQFDSPIGQFQLIQGKIADMYTQMNAARSYVYTVAKACDRGETTRKDAAGA------- 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  ++A  +  +A++ +GG+GYI E +  R  R++    I  G+     + +   L
Sbjct: 329 ILYAAELATKMALDAIQILGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 386


>gi|23098143|ref|NP_691609.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776368|dbj|BAC12644.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 384

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 135/360 (37%), Gaps = 24/360 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++  S   GL        +  +      K      + +        + + +      + 
Sbjct: 40  RIIELSKQMGLFGLSIPEQYGGLGIGMVGKCALYEEIGVTHNGYTTLIGAHTGIGTVGIV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            M   +  + + P + S E                   LTE   G++ +A+ +   K  D
Sbjct: 100 EMGNEQQKQKYLPLMASGE-------------KIGAFALTEPEAGSNASALKTSAIKKKD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++  ++ F ++A  +   G   +   + + S  G     ++ K+G + 
Sbjct: 147 KYILNGTKHYITNATEAEVFTVMAVTDPAKGAKGISSFIVEKSNLGFHVGAVEEKMGLKG 206

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + + E+   +    +   L     G V  +KIL       A  ++   +  L  +  YA 
Sbjct: 207 SHSAEIILDDCEVSVENLLGEEGQGYVNALKILTNGRAGLAARNLGSCQKLLDMSTTYAI 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +ID   +   +A++A++I A  AL++++A   D  ++  +EAA         
Sbjct: 267 ERQQFGTSIIDHQAVAHMLAEMAVEIEALRALTYKVAWMVDNGENVIKEAAML------- 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  ++   V  +A++  GG GYI +  + R+YR++    I  G+       +   L+K
Sbjct: 320 KLYGSEVYNRVADKAVQVHGGIGYISDFPVERYYRDARITRIYEGTSEIQKNIIAGQLKK 379


>gi|119385593|ref|YP_916648.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376188|gb|ABL70952.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 592

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/557 (19%), Positives = 200/557 (35%), Gaps = 75/557 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLS---CTAQELARMANYNTPQLHAY-GPGGERWDK 96
             +  ++ +   + +++L   G+          +   ++A+     L+A     G R + 
Sbjct: 9   RDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGDREGCRLEN 68

Query: 97  --VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
             V     +     +    G      D  +          + A  ++  + +        
Sbjct: 69  GVVHTPKGFLEAFEQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNMAFTMYQGL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  + S +    T +    + P++ S E+  T             + LTE   GTD+  +
Sbjct: 129 THGAYSAIHAHGTDQQKATYLPRMVSCEWTGT-------------MNLTEPHAGTDLGLL 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLE 263
            ++ +   DG Y ++G K F+S+   D       ++LA+  G       +  F+VP+ L 
Sbjct: 176 RTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           +     G  N L    L+ K+G   NAT  + +    G+LLG+L+     +  M     +
Sbjct: 236 NEDGSPGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARI 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              +   S    +   A+ YAR R                  LI  P ++R + D    +
Sbjct: 296 GVGLQGYSVAEAAYQNAVAYARDRLQGRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFL 355

Query: 367 AAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             A AL+F  A+  D A      E      ++ P+ K +          +A +  GG GY
Sbjct: 356 EGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGFETAVQAQQVFGGHGY 415

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           IEE+ +++  R++    I  G+     LD++                L  + G       
Sbjct: 416 IEEQGMSQFVRDARITMIYEGANGVQALDLVG-------------RKLAAEGGKPIMAFF 462

Query: 485 TILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
            ++R  I   + D+ L A FL     L +++  L  A M      F+E          + 
Sbjct: 463 ELIRSEIKAHEGDEALKADFLD---PLKAASKDLQSAAM-----FFME----QGMKDPNA 510

Query: 544 MLHGRFNAAHIIDSLYL 560
            L G ++  H+     L
Sbjct: 511 ALAGSYDFMHLFGHAAL 527


>gi|17647119|ref|NP_080102.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Mus musculus]
 gi|26006698|sp|Q9DBL1|ACDSB_MOUSE RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SBCAD; AltName: Full=2-methyl
           branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD;
           AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase;
           Short=2-methylbutyryl-CoA dehydrogenase; Flags:
           Precursor
 gi|12836415|dbj|BAB23646.1| unnamed protein product [Mus musculus]
 gi|148685767|gb|EDL17714.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b
           [Mus musculus]
          Length = 432

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 141/371 (38%), Gaps = 35/371 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVEAQYGGT--EASFFCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     +      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTIINNLFRKHASEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAM 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W   +  ++ F++ A V+   G   +   L D    G    +
Sbjct: 189 KTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGK 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N         N+        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPET---NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +        Y + R   G  + D   ++  +A +A  + A   L++  A   +  +   +
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIK 365

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA+ A       KY+  ++A    ++ +E +GG GY ++  + + +R++   +I  G+ N
Sbjct: 366 EASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASN 418

Query: 449 AMVLDVLNLLE 459
             +  +   ++
Sbjct: 419 IQLNTIAKHID 429


>gi|269837230|ref|YP_003319458.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786493|gb|ACZ38636.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 381

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 137/378 (36%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    ++  +   GL        +  V     A  +    L       
Sbjct: 26  PRAAEIDRTGEFP--WDVINAAAELGLLGVPIPEEYGGVGADGLAFTLLIEELAGACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +      + +       + +               P+ +  +    GLTE + 
Sbjct: 84  ALTIAAHTGLVCVPLLMFGNEEQKRRFL-------------TPLAEGKMLGAFGLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A  +   +  +    ++G K F ++  ++   I+ A  +   G   +  ++    
Sbjct: 131 GSDAGATRTTAVRDGNEF-VINGQKVFTTNGSIAGVIIVTAVTDPEAGRRGISNIIVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+ + + + K+G   + T ++ F +    +    N+   P E  +  +  LD   + +
Sbjct: 190 APGVSFGQDQEKMGLHGSVTSQVYFQDCRVPVD---NLLGRPGEGFRQFLQVLDGGRIGI 246

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M V +A+A       YA  R   G  + D   +   +AD+A  + AA  L +R A   
Sbjct: 247 GAMSVGIAQAALRAARDYALEREQFGQRIADFQAISFMLADMATQLEAARWLVYRAAWLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     + EAA A       K +  + A  +  +A++  GG GY  E  + R+YR+    
Sbjct: 307 DRGLPHTTEAAMA-------KLFASEAAERICHKAIQIHGGYGYTTEYPVERYYRDVRLT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 360 EIGEGTSEIQRLVIARRL 377


>gi|262376431|ref|ZP_06069660.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308570|gb|EEY89704.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 375

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L +    G    +    +          + A      A    
Sbjct: 24  PFAGEWDQKGIFP--KQALAQMGELGFLGMLIPEEWGGSGTGTLAYVLALEEVAAADGAT 81

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   + +    T +  +D+               P+ +  +     LTE   
Sbjct: 82  SAIMSVHNSVGCVPIFKFGTEQQKQDFLK-------------PLAQGEMIGAFALTEPHT 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AAI ++  K  D        ++  S   +   I+ A  +   G   +   L     
Sbjct: 129 GSDAAAIKTRAVKDGDHYILNGAKQFITSGHNAGMIIVFAVTDPAAGKKGMSAFLVPRDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R++ K+G  ++ T ++  ++        LG                 +  A  +
Sbjct: 189 PGYEVIRVEEKLGLHASDTCQIALTDVRIHESLRLGAEGEGLKIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA  R   G  + +Q  +   +A +A +I AA  L    A   +  +
Sbjct: 249 VGLARAALEEATAYAHDRVAFGKPIFEQQAISFRLASMATEIEAARQLVHFAARKKEAGE 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   EA+ A       K +  +MA  V ++A++  GG GY+++  I R YR++    I  
Sbjct: 309 SCLTEASMA-------KLFASEMAERVCSKALQIFGGYGYLKDFPIERIYRDARICQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVIARSL 375


>gi|332141327|ref|YP_004427065.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551349|gb|AEA98067.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 384

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 136/373 (36%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     ++++   G        S   +   +           M     
Sbjct: 26  PNAAMWDREHHFPV--DAIKKAGELGFCGLYAPESAGGLGLSRLDSSIIFEQLSMGCTTT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++    +  M+A   +  V   W  ++ +              +      LTE   G
Sbjct: 84  TAMLTIHNMATWMIATWGSDDVKDAWCEQLVTG-------------NKLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++  K  +G Y L+G K F+S   S   +++    G  G   V       + +
Sbjct: 131 SDAASLKTKATKE-NGGYVLNGAKVFISGAGSTDILVVMARTGEDGPKGVSAFAVPANTD 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y + + K+G  +  T  + F N      +LLG+                ++ A  SV
Sbjct: 190 GIEYGKAEEKMGWNAQPTRMITFDNVKLDESWLLGEEGQGFKMAMQGLDGGRINIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +    A   D   +
Sbjct: 250 GTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAARQMVRMAACKLDNNDA 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                        + K +   +   V  +A++  GG GYI+E  + RH+R+   + IL G
Sbjct: 310 DK------TTYCAMAKRFATDVGFNVCNDALQLHGGYGYIKEYPLERHFRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M + +   L
Sbjct: 364 TNEIMRVIIGRRL 376


>gi|254974424|ref|ZP_05270896.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-66c26]
 gi|255091816|ref|ZP_05321294.1| putative acyl-CoA dehydrogenase [Clostridium difficile CIP 107932]
 gi|255313551|ref|ZP_05355134.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-76w55]
 gi|255516235|ref|ZP_05383911.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-97b34]
 gi|255649333|ref|ZP_05396235.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-37x79]
 gi|260682503|ref|YP_003213788.1| putative acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260686102|ref|YP_003217235.1| putative acyl-CoA dehydrogenase [Clostridium difficile R20291]
 gi|306519425|ref|ZP_07405772.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-32g58]
 gi|260208666|emb|CBA61438.1| putative acyl-CoA dehydrogenase [Clostridium difficile CD196]
 gi|260212118|emb|CBE02742.1| putative acyl-CoA dehydrogenase [Clostridium difficile R20291]
          Length = 380

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 132/377 (35%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P    L  +    G +       +         K+            +
Sbjct: 26  PIAAETDKTGIFP--RELFSKMAKIGFNGIGTPVEYSGSGGTDIEKVIVVTEIAKKCAAS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S     A  +    T    K + P              M +        LTE   G
Sbjct: 84  AAILSIHTIYAQAILKFGTEEQKKKYLPM-------------MAEGGCVGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D A   +      +   Y L+G K F+S    +++ I+ A  +   G   +  ++ D  
Sbjct: 131 SDAARAATTAIIDEETDEYVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G    +++ K+G   + T EL F N        L            +  LD A + + 
Sbjct: 191 TPGFSIGKIEEKMGIHGSETAELIFDNCRVPKSNLLGKEGKGFN--IAMTCLDGARIGIG 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +AE     +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+   
Sbjct: 249 AQAVGIAEGALEESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKA 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++EAA A+  A  T       A  V   A++  GG GY+++  + R YR++    
Sbjct: 309 RGEKHTKEAAMAKYNASST-------AREVTNLALQIHGGYGYMKDYPLERMYRDAKITE 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 362 IYEGTSEIHKVVISRAV 378


>gi|239503645|ref|ZP_04662955.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 600

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 93/542 (17%), Positives = 192/542 (35%), Gaps = 71/542 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           +  +   V++EL       +    +  A         ++      G   ++  V     +
Sbjct: 28  LRKYQESVNREL-------IDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G      D  +         +I  + +   +          S  +   + 
Sbjct: 81  KEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIE 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  + +  K+ S  +  T             + LTE   G+D+  I ++ +   D
Sbjct: 141 HHGTEQQKQKFLTKLISGVWTGT-------------MCLTESHAGSDLGLIRTKAEPNPD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SP 267
           G Y ++G K F+S+   D       I+LA++         +  F+VP+     DG     
Sbjct: 188 GSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSDDGQVLDR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G   NAT  L F    G+L+G  N     +        + +A+  ++ 
Sbjct: 248 NKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAA 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             +S   A++YA+ R                  +I  P ++  +           AL++ 
Sbjct: 308 SEISFQGALNYAKERLAMRSLSGPKYPEKNADPIIVHPAVRSMLMTQKAFSEGGRALAYF 367

Query: 376 LANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA   D      + + +         + PI K +  +         ++  GG G+I E  
Sbjct: 368 LAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGS 478
           + +  R++  +++  G+     LD+L          LL+  T+L +Q  S  +  + L  
Sbjct: 428 MEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFISQHQSNEVLKP 487

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
             +K+  + +  +SL K     A+   E+I    +A+  Y    + +   +L  R     
Sbjct: 488 YLEKLAELKQQWLSLTKSIAEKAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVA 544

Query: 539 HS 540
           H 
Sbjct: 545 HE 546


>gi|145298893|ref|YP_001141734.1| isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851665|gb|ABO89986.1| Isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 382

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 135/375 (36%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P    L  +    GLH       ++ V     AH +   ++   +   
Sbjct: 26  PRASEIDHSNVFP--RDLWPQMGELGLHGITVAEEYDGVSLGYLAHVLVMEQVSRASASV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + P + S E+                L ++E   
Sbjct: 84  GLSYGAHSNLCINQIHRHGTPDQKARYLPSLVSGEH-------------VGALAMSETGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   D         W  + P +D F++ A+ +   G   +   + +   
Sbjct: 131 GSDVVSMRLTAKHDGDHFVLNGNKMWITNGPDADTFVIYAKTDTSAGPKGISAFIVEAGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R ++T EL F N        L    G    +        +  A   
Sbjct: 191 QGFTTAQKLDKLGMRGSSTCELVFDNCRVPQENLLGTLHGGARVLMSGLDYERVVLAAGP 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y R R   G  + +  +++  +AD+   +A++ AL + +A++ D+ +
Sbjct: 251 LGIMQACMDVVLPYVRERKQFGQAIGEFQLVQGKLADMYTRLASSRALVYSVASACDQGR 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++             +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 311 TSRKD-------CAAAILFAAENATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGA 363

Query: 445 GSGNAMVLDVLNLLE 459
           G+       +   L 
Sbjct: 364 GTSEIRRWLIGRELM 378


>gi|172064132|ref|YP_001811783.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171996649|gb|ACB67567.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 393

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 132/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVAEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDHYVLNGTKMWITNGPDCDTLVVYAKTDLDAGSRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|114562518|ref|YP_750031.1| butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
 gi|114333811|gb|ABI71193.1| Butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
          Length = 385

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 144/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++ A +A   + +     P   +WD+    P    +++++   G        
Sbjct: 2   DFNLNEDQRQFADLARQFSAE--ELAPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +                   +++    +  MV    T  + K W+  + +  
Sbjct: 58  SEGGMGLSRLDSSIIFEELAHGCTATTAMLTIHNMATWMVTTWGTETLRKQWSEGLTTG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +     LTE   G+D A++ ++  +  D  Y ++G K F+S      
Sbjct: 117 ------------QLLASYCLTEPGAGSDAASLQTKAVRDGDD-YLITGSKMFISGAGETE 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +  +       G+ Y + ++K+G  +  T  + F N        L
Sbjct: 164 LLVVMCRTGEAGPKGISAIAVPADAAGVTYGKAEDKMGWNAQPTRLISFENVRVPAANLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  S+   + +L  A  Y   R   G  L     ++  +
Sbjct: 224 GEEGQGFTFAMKGLDGGRINIATCSIGTAQAALTRATEYMNERKQFGKPLAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A   D           A     + K +   +   V   A++  
Sbjct: 284 ADMATELVAARQMVRLAAFKLDTQDPE------ASAYCAMAKRFATDVGFQVCDGALQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI E  + RH+R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|296389575|ref|ZP_06879050.1| isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 387

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    + R+    GL     D  +        AH +    +   +   
Sbjct: 31  PRAAEIDQDNQFPM--DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + P + S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++ D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 VGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAYLYAVAAACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPTGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|255263408|ref|ZP_05342750.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
 gi|255105743|gb|EET48417.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
          Length = 592

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/539 (18%), Positives = 188/539 (34%), Gaps = 72/539 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIH 112
                L         +E  +++N     L+      G   +   V     +     +   
Sbjct: 27  PGFSELDRDFTGAVLEEAGKISNEVLAPLNVVGDTEGCVLENGVVRTPTGFKEAFDQMRE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G         F                ++ A +        +  + S +    +    K
Sbjct: 87  GGWTALDASEEFGGQSMPYVMHTAVNEPFVSANMAFNMYQGLTHGAYSAILEHGSGEQKK 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE   GTD+  + ++     DG + +SG K
Sbjct: 147 TYLPKLASCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSFQVSGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++ G       V  F+VP+ L +     G+ NG+   +++
Sbjct: 194 IFISAGEHDMSDNIIHLVLAKIPGGPDGIKGVSLFIVPKFLVNDDGSVGARNGVSCGKIE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G   N+T  + +    G+L+G+ +     +  M     L   +   +    +   A+
Sbjct: 254 EKMGIHGNSTCVMNYDEATGYLIGEEHKGMRAMFVMMNEARLGVGLQGYAAAEAAYQNAV 313

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA  R                  LI  P ++R + +    I  A A ++  AN  D A 
Sbjct: 314 IYANDRLQGRAVTGTENPEGPADPLIVHPDIRRNLMEQKSFIEGARAFTYWGANLIDRAH 373

Query: 385 SRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +  A     ++ PI K +           A +  GG GYIEE  +++  R++    I
Sbjct: 374 RMRDADADGLISLLTPIIKGFQTDKGFEYATAAQQVYGGHGYIEEWGMSQFARDARIAMI 433

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL-A 501
             G+     LD++                L QD G        +++  I   K ++ L A
Sbjct: 434 YEGANGVQALDLVG-------------RKLAQDGGKHVMAFFEMVKTFIKENKGNEALKA 480

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            FL     L +++  L  A M      F++N       + +  L G ++   +   + +
Sbjct: 481 DFLD---PLKAASKDLQSAAM-----YFMQN----GMTNPNNALAGSYDFMTMFGHVCI 527


>gi|257056459|ref|YP_003134291.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586331|gb|ACU97464.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 373

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 143/398 (35%), Gaps = 37/398 (9%)

Query: 68  CTAQELARMANYNTPQLHAYG-PGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              ++LAR    N  +L  +     E  R D+         +  ++   GL        +
Sbjct: 6   DDVRDLARTFCRN--ELTPHQQRWAEQKRVDR--------EVWTKAGEVGLLALSVPEEY 55

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH+         +   A  +   +   A  +    +    ++W PK+ S EY 
Sbjct: 56  GGGGGTFAHEAVLYEEQARSGDSAWGVTVHNGIVAHYLLAYASEEKKREWLPKLASGEY- 114

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          + +TE   G+D+ +IT++  +  D         +  +  ++D  +
Sbjct: 115 ------------VGAIAMTEPGTGSDLQSITTRAVRDGDHYVINGAKTFITNGALADLVV 162

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +  + +   G   +  ++ + S  G    R+ +K+G R   T EL F +    +   L  
Sbjct: 163 VAVKTDPDAGAKGISLIVVETSTPGFRRGRVLDKVGLRGQDTAELFFDDVRVPVENLLGD 222

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G ++ M+ L    L  AI +V+GM  ++ + I Y + R   G  LI     +  + 
Sbjct: 223 EEGQGFIQLMQQLPQERLIIAITAVAGMESAIEQTIAYTKERSAFGRPLIKFQNTRYKL- 281

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
                 A A   +       DE   R          A + K W  +    V+ E ++  G
Sbjct: 282 ------AEAATEAAVARAFLDECIERHLRGELDVQSAAMVKLWSTERVNKVVDECVQLFG 335

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ E  IAR + +   + I  G+   M   +   L
Sbjct: 336 GYGYMTEYPIARAWADVRVSRIFGGTNEIMKDIISRTL 373


>gi|331005153|ref|ZP_08328553.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
 gi|330421033|gb|EGG95299.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
          Length = 389

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     P    L R+    GL        +        AH +    +   +   
Sbjct: 33  PRAAQIDIDNEFPE--DLWRKFGDLGLLGITVSEEYGGSGMGYLAHVVALEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         K + P + S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIYKNGNESQKKKYLPALCSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMQLKAEKSGDHYILNGNKMWITNGPDAHTYVIYAKTDTHAGSKGITAFIVERDS 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V+ +   +  +  ++S   
Sbjct: 198 VGFSRHQKLDKLGMRGSNTCELVFQDCPVPAENILGKEGQGVKVLMSGLDFERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L   + Y   R   G  + +  +++  +AD+  D++A+ A  + +A S D  +
Sbjct: 258 VGIMQACLDLVVPYIHDRKQFGQSIGEFQLIQGKVADMYTDLSASRAYLYAVAQSCDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A           +  + A  +  +A++ +GG+GY+ E S  R  R++    I  
Sbjct: 318 ATRKDSA-------AVILYTAEKATQMALQAIQTLGGNGYVNEFSAGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K T+
Sbjct: 371 GTSEIRRMLIGRELFKETS 389


>gi|118778933|ref|XP_308965.3| AGAP006780-PA [Anopheles gambiae str. PEST]
 gi|116132618|gb|EAA04728.3| AGAP006780-PA [Anopheles gambiae str. PEST]
          Length = 429

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 135/377 (35%), Gaps = 25/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK        +  R+    G+        +  +      H I    L   +   
Sbjct: 70  PLAQEIDKQNEFKEMRSFWRKLGEMGVLGVTVKPEYGGLGGSYLDHCIVNEELSRASGSV 129

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 130 ALSYGAHSNLCVNQIHRHGTDEQKERYLPKLCSGEH-------------IGALAMSEAGS 176

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D+ ++  +  K  D         W  + P++D +++ A+ +        +   + +  
Sbjct: 177 GSDVVSMKLRADKHGDYYVLNGSKFWITNGPVADTYVIYAKTDTSAKPQHGITAFIVERG 236

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G       +K+G R + T EL F +     G +LG LN     +     L  L  A  
Sbjct: 237 TAGFTQGPKLDKLGIRGSPTGELIFEDAKVPAGNILGGLNKGVYVLMSGLDLERLVLAAG 296

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+ +   A  YA  R      + +  +++  +AD+   + A  A  + +A + D  
Sbjct: 297 PVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARACDRG 356

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  ++             +C + A  V  +A++ +GG+GYI +    R  R+     I 
Sbjct: 357 QANPKD-------CAGVILYCAEKATQVALDAIQILGGNGYINDYPTGRIMRDCKLYEIG 409

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 410 AGTSEIRRMLIGRALNK 426


>gi|330938907|ref|XP_003305779.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1]
 gi|311317037|gb|EFQ86110.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1]
          Length = 428

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 142/390 (36%), Gaps = 27/390 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R DK    P  + + ++    G      D  F  +    QAH
Sbjct: 56  EFARREIPE-----EVAARTDKQNEFP--NDMWQKFGEAGFLGITADEEFGGLAMGYQAH 108

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L   +        + S    + + L         + P + S E           
Sbjct: 109 CVVMEELSRASGSIGLSYAAHSQLCVNQLMLNGNAAQKAKYLPGLISGE----------- 157

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                GL ++E   G+D+ ++ +  +++  G        W  + P +   ++ A+ E   
Sbjct: 158 --KIGGLAMSEHSAGSDVVSMKTTAKEVDGGYLLNGTKMWITNGPDAHTIVVYAKTEPTA 215

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   + D + +G       +K+G R + T EL F N F     +LG++N     + 
Sbjct: 216 ASKGITAFIVDTTTDGFSVASKLDKLGMRGSNTGELVFENVFVPSENVLGEVNRGVRVLM 275

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+ SL   + Y  +R   G  +    +++  +AD+     A+ 
Sbjct: 276 EGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRASQ 335

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++ +A + DE  +  +              +  + A  V A+A++ +GG GY+ E  +
Sbjct: 336 AFTYSVARAVDELHASPD---IKTQDCAGAILYAAERASEVAADAVQLMGGMGYMNEVPV 392

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++    I  G+     + +     K
Sbjct: 393 GRILRDAKLYEIGAGTSEVRRMVIGRAFNK 422


>gi|307728271|ref|YP_003905495.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307582806|gb|ADN56204.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 376

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 137/379 (36%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P    WD+    P  + + R+    G +  +   ++                    
Sbjct: 20  EAITPYAAAWDRERTFP--NDVHRQLAGLGAYGVLVPETYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        +DW               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLSYGNDAQKRDWL-------------TPLARGEMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +  D  Y L+G K F++S   ++  I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTAIREGD-TYVLNGVKQFITSGKNANVAIVMAVTDKAAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G    RL++K+G  S+ T ++ F +       L+G                 + 
Sbjct: 184 VPTDSQGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIGAEGEGYRIALSGLEGGRIG 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  SV   R +   A+ YA+ R   G  L     ++  +A++A  + AA  L +  A  
Sbjct: 244 IAAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQFRLAEMATQLEAARQLIWHAAAL 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+   
Sbjct: 304 KDAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRV 356

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+ +   + +   L
Sbjct: 357 CQIYEGTSDIQKILIARGL 375


>gi|229489982|ref|ZP_04383835.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323083|gb|EEN88851.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 386

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 145/398 (36%), Gaps = 36/398 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  TA++ A              P    WD+ +  P    +LR++   G+       
Sbjct: 8   ERAIRDTARDFAAE---------HLAPNAVEWDQTKHFPV--DVLRKAASLGMGGIYIRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +    R               +S       M+           W P + S +
Sbjct: 57  DVGGSELSRVDAARIFEELAKGDPSIAAYISIHNMVTWMIDQFGNDEQRHKWVPGLCSMD 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A ++++  +  D  Y L+G K F+S    SD
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F +        
Sbjct: 163 VYVVMART-GSAGAKGISAFIVPKDSPGLSFGANEIKMGWNAQPTRQVIFEDVRVPAANM 221

Query: 302 LNV-STGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L    +G    MK      L+ A  SV G + +L +A+ Y   R   G  LI+   ++  
Sbjct: 222 LGEEGSGFRIAMKGLNGGRLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQ 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  L +R A + ++      E      +  + K +       V  +A++ 
Sbjct: 282 LADMRTELEAARTLLWRAAAALEDGAPDVVE------LCAMAKRFATDTGFDVANKALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY+ E  I +  R+   + IL GS   M + +  
Sbjct: 336 HGGYGYLAEYGIEKIVRDLRVHQILEGSNEIMRVVIAR 373


>gi|32450737|gb|AAH54428.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Mus musculus]
          Length = 432

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 141/371 (38%), Gaps = 35/371 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVEAQYGGT--EASFFCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     +      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTIINNLFRKHASEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAM 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W   +  ++ F++ A V+   G   +   L D    G    +
Sbjct: 189 KTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGK 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N         N+        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPET---NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +        Y + R   G  + D   ++  +A +A  + A   L++  A   +  +   +
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIK 365

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA+ A       KY+  ++A    ++ +E +GG GY ++  + + +R++   +I  G+ N
Sbjct: 366 EASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASN 418

Query: 449 AMVLDVLNLLE 459
             +  +   ++
Sbjct: 419 IQLNTIAKHID 429


>gi|319791524|ref|YP_004153164.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593987|gb|ADU35053.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 598

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 98/527 (18%), Positives = 182/527 (34%), Gaps = 71/527 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KVEFHP 101
           +   P+    +        ++   +E  + A      L+      G   D    +V+   
Sbjct: 25  LKALPAHAETD-----ADTINAVIEEAGKFAAEVPFPLNISGDEEGCVLDKTTHEVKTPK 79

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +     + +  G      D +F          +      ++        M P ++  + 
Sbjct: 80  GFKDAYAKYVEGGWPALSCDPAFGGQGLP--FVVNQCLFEMLNSANQAWTMYPGLSHGAY 137

Query: 162 VAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL    T    K + PK+ S E+  T             + LTE   GTD+  + ++ +
Sbjct: 138 EALKAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGTDLGLLRTKAE 184

Query: 220 KISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED---- 264
              DG Y ++G K F+S+   D       ++LA++         +  F+VP+        
Sbjct: 185 PQPDGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKVKADGS 244

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N +    L++K+G   NAT ++      G L+G+ N     +  M     L     
Sbjct: 245 LGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLAAMFVMMNAARLGVGNQ 304

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATA 371
           S+    V+   A+ YA+ R                  +I  P +++ +           A
Sbjct: 305 SLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAEGGRA 364

Query: 372 LSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L        D+  +  +E           ++ PI K +            M+  GG G+I
Sbjct: 365 LQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHIATNSCMQVFGGHGFI 424

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQDLGSSG 480
           +E  + +  R++  N I  G+     LD+L     G N      F +L + L ++ G + 
Sbjct: 425 KEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVARLVEEEGVNE 484

Query: 481 KKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
           K       I +L D ++    + G   F       A++   L  AG 
Sbjct: 485 KMAEFINPIAMLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGH 531


>gi|222479743|ref|YP_002565980.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452645|gb|ACM56910.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 384

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 143/379 (37%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D  E +P  + ++ ++   GL        +  V                A    
Sbjct: 26  PVATEYDVEEEYP--YEVMDKAADMGLLAPHVPVEYGGVGYSSVENAILTEELFAADPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S +   A  +    T    +   P++ +                 +G  ++E + G
Sbjct: 84  GLCVSSAGFGAEALMEFGTDEQKERVLPEVTAG-------------DAVMGSAISEPQAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+ ++ ++ +K  D         W  +  ++D F+++ + +  +        ++L +G 
Sbjct: 131 SDVTSVATRAEKDGDEWVINGSKMWITNGTVADYFVVVCETDPEIDDRYSGYSQILVEGD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +GL   ++  K+G R++ T EL F +        +     G ++ M+         A  
Sbjct: 191 RDGLTRDKITGKLGIRASDTAELRFDDVRVPDENLIGQRGMGFLQLMQFFDETRTAVAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   R +   A+ YA  R      + D   +K  +A++  +  AA  L++R A + D  
Sbjct: 251 GVGIARGAAERALEYAEEREQFDRPISDFQAIKHKLAEMHTNTEAARWLTYRSAWAVDN- 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E+     +A + K +  + A  V  EA++  GG+GY+ +  + R YR++    I 
Sbjct: 310 -----ESGDLTALASMAKEFASRTAVEVANEAVQVHGGAGYVNDHDVERLYRDAKITQIY 364

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            G+       +   L    
Sbjct: 365 EGTTEIQKNIIARELLDEG 383


>gi|41393139|ref|NP_958899.1| isovaleryl-CoA dehydrogenase, mitochondrial [Danio rerio]
 gi|28279589|gb|AAH45426.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio]
 gi|182891438|gb|AAI64520.1| Ivd protein [Danio rerio]
          Length = 418

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 131/372 (35%), Gaps = 24/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK    P      +     GL        F         H I    +  ++   
Sbjct: 60  PYADEIDKKNEFPQMREFWKEMGDLGLLGVTAPVEFGGTGLGYLDHVIIMEEISRVSAAI 119

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ + E+                L ++E   
Sbjct: 120 GLSYGAHSNLCVNQMVRHGNQKQKEKYMPKLLTGEH-------------VGALAMSESNS 166

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  +   +D  I+ A+ +       +   + +   
Sbjct: 167 GSDVVSMKLTAKKQGDHYVLNGNKFWITNGSDADVLIVYAKTDPEAVARGITAFIVEKGM 226

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R ++T EL F +       +LG LN     +     L  L  A   
Sbjct: 227 PGFSSAQKLDKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLDLERLVLASGP 286

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L  AI Y   R   G  +    +M+  +AD+   +++     + +A + D+  
Sbjct: 287 VGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLYNVARACDKGH 346

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +++             +C + A  V  + ++C+GG+GYI +  + R  R++    I  
Sbjct: 347 FSAKD-------CAGVILYCAENATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEIGA 399

Query: 445 GSGNAMVLDVLN 456
           G+     + +  
Sbjct: 400 GTSEIRRIIIGR 411


>gi|325093887|gb|EGC47197.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 447

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 75/426 (17%), Positives = 151/426 (35%), Gaps = 41/426 (9%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           L   +  F S   + L  +  Y      +E+A                  R D     PA
Sbjct: 52  LRERVQEFTSHWDRGLIQV-RYTGREIPEEVAA-----------------RTDLQNNFPA 93

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
              + ++    G      D  +  +    QAH +    +   +        + S    + 
Sbjct: 94  --EMWQKLGEAGFLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQ 151

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++L  +P     + P + S                   L ++E   G+D+ ++ +  + +
Sbjct: 152 LSLNGSPEQKAKFLPGLISG-------------QKIGALAMSEHSAGSDVVSMKTTAKAV 198

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  + P +D  ++ A+ +   G   +   + + +  G    R  +K+G 
Sbjct: 199 DGGYLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGM 258

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R + T EL F + F     +LG LN     + +   L  L  +   +  M+ +L   + Y
Sbjct: 259 RGSNTGELIFEDVFVPQENMLGALNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPY 318

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----R 394
              R   G  +    +++  +AD+   ++A+ A ++  A   DEA + S   A       
Sbjct: 319 THTRKQFGTPIAHNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEANNSAIRT 378

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                   +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +
Sbjct: 379 QDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMLI 438

Query: 455 LNLLEK 460
             +  K
Sbjct: 439 GRVFNK 444


>gi|91790023|ref|YP_550975.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91699248|gb|ABE46077.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 376

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 141/395 (35%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QEL R A     Q   + P   RWDK    P      +     G +       F    
Sbjct: 5   QDQELIRDAVRAFAQQELW-PHAARWDKEHHFP--KEAHKGLAELGAYGICVPEEFGGAH 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                                  +S +    + + +        K W             
Sbjct: 62  LDYVTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAAQKKQWL------------ 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
             P+ +  +     LTE   G+D +++ +   K  DG Y ++G K F++S  +    I++
Sbjct: 110 -TPLAQGQMLGVFCLTEPHVGSDASSLKTAAVKDGDG-YVINGVKQFITSGKNGHAAIVI 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A  +   G   +   +      G    RL++K+G  S+ T ++ F N       L+G   
Sbjct: 168 AVTDKGAGKKGMSAFIVPTDAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIGAEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  SV   R +   A+ YA+ R   G  + +   +   +A+ A
Sbjct: 228 EGYRIALGALEGGRIGIAAQSVGMARSAFEFALGYAKERQSFGTAIFNHQAVGFRLAECA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L +  A+  D  +   +EAA A       K +  +MA  V + A++ +GG G
Sbjct: 288 TKLEAARQLIWHAASLRDAGRPCLKEAAMA-------KLFASEMAEEVCSAAIQTLGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YVSDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|218782675|ref|YP_002433993.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764059|gb|ACL06525.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 615

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 174/465 (37%), Gaps = 62/465 (13%)

Query: 82  PQLHAYGPGGERW---DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
           P L      G       KV     +    +  +         D                 
Sbjct: 55  PTLTEGDRAGGAIFDNGKVTVPECYQKPYKLLVEGEWVGMTEDPEVGGQGFPLTIGQAVI 114

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              + A             +  M+ +  T +  + +  K++S E+  T            
Sbjct: 115 EYIIGANFAFAAYGYAGHGTGKMIEIFGTDKQKELYLKKLYSAEWGGT------------ 162

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG-- 251
            + LTE   G+D+  +++      DG Y +SG+K F++    D        +LA++EG  
Sbjct: 163 -MVLTEPEAGSDVGNLSTTATPNDDGTYNISGNKIFITGAEQDLTPNVIHPVLARIEGAP 221

Query: 252 ----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299
                +  F+VP++  +     G PN +    +++K+G + ++T  L F       G LL
Sbjct: 222 KGTKGISLFIVPKIWVNDDGSLGEPNDVVCTGIEHKMGLKGSSTCSLTFGGQGKCKGVLL 281

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G++N     +  M     L    +       +   A++YA+ R   G             
Sbjct: 282 GEVNKGMQVMFHMMNEARLLVGTIGACNASAAYLYAVNYAKERVQ-GRDLDDMFNHDATP 340

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPIT 400
             +I  P ++R +  +   +    +L +  AN FD+ +  ++EA    +      + PI 
Sbjct: 341 VTIIKHPDVRRMLLWMKAHVDGMRSLCYYGANLFDKIELETDEAKKDYMQGVIEILTPII 400

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K +C      V  EA++C GG GY +E  + +  R+S  NSI  G+     +D+L     
Sbjct: 401 KSYCTDRGFQVCGEAIQCYGGYGYTQEFPVEQIMRDSKINSIYEGTNGIQAMDLLGRKMG 460

Query: 458 LEKGT---NLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDK 498
           ++KG    NL  ++   + Q     +  +  + L ++++   E  
Sbjct: 461 MKKGAYFINLLSEIGKIVAQAKQNPALDQDASKLEEAVTRLSEIA 505


>gi|195054501|ref|XP_001994163.1| GH16400 [Drosophila grimshawi]
 gi|193896033|gb|EDV94899.1| GH16400 [Drosophila grimshawi]
          Length = 406

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 145/380 (38%), Gaps = 32/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G    R+D+   +PA    +++    GL                     A          
Sbjct: 48  GANAARFDREHLYPA--QQIKQMGELGLMAVSVPEELGGTGLDYLAYAIAMEEISRGCAS 105

Query: 148 AGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG +MS + +     +          ++     S E                   L+E  
Sbjct: 106 AGVIMSVNNSLYLGPLQSFANDAQKAEYITPFVSGE-------------RVGCFALSEPG 152

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A ++   +  D         W  ++  ++A I+ A    ++    +   +    
Sbjct: 153 NGSDAGAASTVATEKGDHYVLNGTKAWITNAFEAEASIVFATTNKQLKHKGISAFIVPKG 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G R ++T +L F +     +   ++        KI +  LD+  + +
Sbjct: 213 IKGFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKESLLGTAGLGFKIAMKTLDAGRIGI 269

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +G  + +A+     A+ YA++R   G  +     +++ IAD++L + +A  L++R A   
Sbjct: 270 AGQALGIAQASLEVAVDYAQKRQSFGKPISKLQAIQQKIADMSLAVESARLLTWRAAWLK 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  S ++EAA A++ A      C         + ++ +GG GY+ + S  RHYR++   
Sbjct: 330 DQKMSYTKEAAMAKLAASEAATLC-------AHQCIQILGGMGYVTDMSAERHYRDARIT 382

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   + K
Sbjct: 383 EIYEGTSEIQRLVIAGSILK 402


>gi|332373428|gb|AEE61855.1| unknown [Dendroctonus ponderosae]
          Length = 416

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           ++ E       P   T +     LTE   GTD  A+ +  +K+ D         W  +S 
Sbjct: 135 YANEAQKEKYLPKLATEMVGSFALTEPSSGTDAFALKTTAKKVGDEYVLNGSKMWISNSD 194

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            S  F+++A  +   G   +   + D    G    R +NK+G  ++ T  L F +     
Sbjct: 195 FSGVFLVMANADTSKGYKGISCFIVDRDTPGFTINRPENKLGIVASGTCMLTFEDVKIPT 254

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQ 352
               ++     +  KI I  L+   + ++   + LA+        Y   R   G  + + 
Sbjct: 255 S---HLLGEIGQGYKIAIDILNEGRIGIAAQMLGLAQGCFDATIPYTLERQQFGQPIFNF 311

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA+IA +I AA  L++  A   ++     +EA+ A       K +  ++A    
Sbjct: 312 QAMQHQIAEIATEIEAARLLTYNAARLLEQKVPYIKEASMA-------KLYASEVAQRTT 364

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+ ++    + YR+    SI  G+ N  +  +   + +
Sbjct: 365 IKCIDWMGGVGFTKDFPQEKFYRDCKIGSIYEGTSNIQLSTIAKAIYR 412


>gi|326929944|ref|XP_003211113.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Meleagris gallopavo]
          Length = 355

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 10/288 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  S E      +P           L+E   G+D  A ++  +   D         W  +
Sbjct: 72  KFGSEEQKHKWISPFTSGDKIGCFALSEPGNGSDAGAASTMARLDGDEWVLNGTKAWITN 131

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +  + A ++ A  +  +    +   L      GL   + ++K+G R+++T  L F +   
Sbjct: 132 AWDASATVVFATTDKSLKHKGISAFLVPMPTAGLSLGKKEDKLGIRASSTANLIFEDCRI 191

Query: 297 FLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L  +  G    M+ L    +  A  ++   + +L  A+ YA +R   G  +    
Sbjct: 192 PKDNLLGQLGMGFKIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQ 251

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A+ + +A  L++R A   D  K  ++EAA A++ A        + A  +  
Sbjct: 252 AIQFKLADMAVALESARLLTWRAAMLKDNGKPFTKEAAMAKLAA-------SEAATNIAH 304

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A++ +GG GY+ E    RHYR++    I  G+     L +   L K 
Sbjct: 305 QAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLKA 352


>gi|302383508|ref|YP_003819331.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194136|gb|ADL01708.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 389

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 143/400 (35%), Gaps = 35/400 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +  T    A  A+   P            D+         L       GLH    + 
Sbjct: 18  ADAIRDTTARWA--ADRLAPI-------AAEIDETNTFR--RDLWPEMGDLGLHGITVEE 66

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +      H +    +   +        + S    + +    TP     + PK+ S 
Sbjct: 67  EWGGLGLGYLEHVVAMEEVSRASASIGLSYGAHSNLCVNQIRRWGTPDQKTRYLPKLISG 126

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+ ++ +Q +K+ D         W  ++P +D
Sbjct: 127 EH-------------VGSLAMSEAGSGSDVISMRTQARKVGDRYVLNGTKFWITNAPSAD 173

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+ +   G   V   L +    G    +  +K+G R + T EL F +       +
Sbjct: 174 TLVVYAKSDPEAGSKGVTAFLIEKGMKGFSVSKKLDKMGMRGSDTAELVFEDCEVPEENV 233

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G +    G +           A   +  M+ +L   + Y R R   G  +    +M+  
Sbjct: 234 MGPVGGGAGVLMSGLDYERAVLAAGPLGIMQAALDVVLPYVRDRKQFGKPIGSFQLMQGK 293

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+ + + +A    + +A + D   +   +AA A ++A        + A  V  EA++ 
Sbjct: 294 IADMYVALNSARTYVYAVAKACDAGLTTRYDAAGAILLA-------SENAVKVSLEAVQA 346

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+GY ++  + R  R++    I  G+       +   L
Sbjct: 347 LGGAGYTKDWPVERLVRDAKLYDIGAGTNEIRRFLIGREL 386


>gi|27379066|ref|NP_770595.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27352216|dbj|BAC49220.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 381

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 141/382 (36%), Gaps = 25/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   RWD+ +  P    ++R +   G+               +             
Sbjct: 22  EKIAPHALRWDEEKHFPV--DVMREAATLGMGGIYIREDVGGSAMTRFDAALIFEALATG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+    +      W PK+ + E             +     LTE
Sbjct: 80  CPTTSAFISIHNMASWMIDAYGSDTQRHKWLPKLCTME-------------LIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S       ++     G  G   +  L+ D
Sbjct: 127 PGAGSDAAALRTRAVRDGDH-YVLNGQKQFISGAGGTDLLVAMVRTGGDGPGGISTLVID 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSA 321
           G+  G+ +   + K+G  +  T  + F N    +     +  V             L+  
Sbjct: 186 GNTPGVSFGANERKMGWNAQPTRAVMFENARVPVANRLSEEGVGFKIAMAGLDGGRLNIT 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +A +Y + R   G  L +   ++  +AD+A+++ AA    +R A + D
Sbjct: 246 ACSLGGAQTALDKARNYMKERKAFGKRLDEFQALQFRLADMAIELEAARTFLWRAAAALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 306 RKDPD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           IL G+   M L V   L +G  
Sbjct: 360 ILEGTNEIMRLIVARKLIEGAR 381


>gi|134292212|ref|YP_001115948.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
 gi|134135369|gb|ABO56483.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
          Length = 393

 Score =  277 bits (708), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 131/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGSDAQKRKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKHGDRYVLNGTKMWITNGPDCDTLVVYAKTDVDAGSRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A S        R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSAGSDHLRQ--VRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|260555411|ref|ZP_05827632.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411953|gb|EEX05250.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 600

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 93/542 (17%), Positives = 190/542 (35%), Gaps = 71/542 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           +  +   V++EL       +    +  A         ++      G   ++  V     +
Sbjct: 28  LRKYQESVNREL-------IDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G      D  +         +I  + +   +          S  +   + 
Sbjct: 81  KEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIE 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  + +  K+ S  +  T             + LTE   G+D+  I ++ +   D
Sbjct: 141 HHGTEQQKQKFLTKLISGVWTGT-------------MCLTESHAGSDLGLIRTKAEPNPD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SP 267
           G Y ++G K F+S+   D       I+LA++         +  F+VP+     DG     
Sbjct: 188 GSYSITGEKIFISAGEHDLSENIIHIVLARLPHAPAGTKGISLFIVPKFNVSDDGQVLDR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G   NAT  L F    G+L+G  N     +        + +A+  ++ 
Sbjct: 248 NKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNSMFTFMNTARIGTAVQGLAA 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
             +S   ++ YA+ R                  +I  P ++  +           AL++ 
Sbjct: 308 SEISFQGSLSYAKERLAMRSLSGPKYPDKNADPIIVHPAVRSMLMTQKAFSEGGRALAYF 367

Query: 376 LANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA   D      + + +         + PI K +  +         ++  GG G+I E  
Sbjct: 368 LAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVL---------NLLEKGTNLFEQLFS--TLEQDLGS 478
           + +  R++  +++  G+     LD+L          LL+  T+L EQ  S     + L  
Sbjct: 428 MEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIEQFISQHQFNEVLKP 487

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
             +K+  + +  +SL K     A+   E+I    +A+  Y    + +   +L  R     
Sbjct: 488 YLEKLAELKQQWLSLTKSIAEKAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVA 544

Query: 539 HS 540
           H 
Sbjct: 545 HE 546


>gi|332993023|gb|AEF03078.1| acyl-CoA dehydrogenase family protein [Alteromonas sp. SN2]
          Length = 384

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 137/378 (36%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P   +WD+    P     ++++   G        S   +   +           M 
Sbjct: 22  QEFAPHAAQWDRDHHFPV--EAIKKAGELGFCGLYTPESEGGLGLSRLDASIIFEQLSMG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +++    +  M+A        K W   + S E                   LTE
Sbjct: 80  CTTTTAMLTIHNMATWMIATWGQEATKKQWCEVLVSGE-------------KLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D A++ ++   + +G Y L+G K F+S   S D  +++A+  G  G   +     
Sbjct: 127 PGAGSDAASLKTKATPVDNG-YVLNGAKVFISGAGSTDVLVVMART-GGDGPKGISAFAV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
               +G+ Y + + K+G  +  T  + F N        LGD                ++ 
Sbjct: 185 PADADGIIYGKAEEKMGWNAQPTRMITFDNVKIDASCRLGDEGQGFKMAMQGVDGGRINI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L  A  Y   R   G  +     ++  +AD+A ++ AA  +    A+  
Sbjct: 245 ATCSIGTAQQALNVARQYLTEREQFGNPIATFQALQFKLADMATELVAARQMVRMAASKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   + S           + K +   +   V  +A++  GG GYI+E  + RH R+   +
Sbjct: 305 DSKHADS------STYCAMAKRFATDVGFKVCNDALQLHGGYGYIKEYPLERHVRDVRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + +   L
Sbjct: 359 QILEGTNEIMRVIIGRRL 376


>gi|13310129|gb|AAK18172.1|AF290950_4 FadFx [Pseudomonas putida]
          Length = 375

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 139/398 (34%), Gaps = 28/398 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +++   Q++A              P  E+WDK    P     +      GL   +    +
Sbjct: 2   LVTDEQQQIADAVRAFA--QERLKPFAEQWDKEHRFP--KEAIEEMAGLGLFGMLVPEQW 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
                       A             +MS   +   +  L   + +    +         
Sbjct: 58  GGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGSEQQKAQFL-------- 109

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+   ++     LTE + G+D +++ ++ +   D        ++  S   +   
Sbjct: 110 -----TPLATGAMLGAFALTEPQAGSDASSLKARARLDGDHYVLNGSKQFITSGQNAGVV 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R+++K+G  ++ T ++ F N    +   L 
Sbjct: 165 IVFAVTDPEAGKRGISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  +V   R +   A  YA  R   G  LI+   +   +A
Sbjct: 225 AEGEGYKIALANLEGGRIGIASQAVGMARAAFEVARDYAHERQSFGKALIEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  IA A  +    A   D  +    EA+ A       K +  +MA  V ++A++ +G
Sbjct: 285 DMATKIAVARQMVLHAAALRDAGRPALVEASMA-------KLFASEMAEKVCSDALQTLG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 338 GYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIARNL 375


>gi|224050691|ref|XP_002196781.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase
           [Taeniopygia guttata]
          Length = 487

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 128/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P  ++ D+           ++    G+        +         H +    +   
Sbjct: 123 EHLAPKAQQIDQENEFKGMRDFWKKLGELGVLGVTAPAEYGGSALGYLDHVLVMEEISRA 182

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +           + PK+ S E+                L ++
Sbjct: 183 SASVGLSYGAHSNLCINQLVRNGNEAQKHKYLPKLISGEH-------------IGALAMS 229

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRL 261
           E   G+D+ ++  +  K  D         W  + P +D  I+ A+ +         +   
Sbjct: 230 EPNAGSDVVSMKLKADKKGDFFVLNGNKFWITNGPDADVLIVYAKTDMNAVPASQGITAF 289

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + +    G    +  +K+G R + T EL F +        L   +  V  +   + L+  
Sbjct: 290 IVERGMPGFRTAQKLDKLGMRGSNTCELIFEDCKVPAENVLGTLSKGVYVLMSGLDLERL 349

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S   +  M+  L  AI Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 350 VLSGGPLGLMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 409

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+    +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 410 ACDQGHFNAKD-------CAGVILYSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAK 462

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 463 LYEIGAGTSEVRRLVIGRA 481


>gi|149185724|ref|ZP_01864040.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148830944|gb|EDL49379.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 384

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 152/404 (37%), Gaps = 31/404 (7%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G++ L+    ++  MA   T       P    WD+    P    ++++S   G       
Sbjct: 6   GQFQLTEEQLQIQEMAQRFTA--DNITPHAAEWDEKSHFP--RDVIKQSAELGFGAIYVS 61

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +   +   +                    +S    +A M+       V + + P + + 
Sbjct: 62  ETSGGIGLGRLEAALIMEAMAYGCPATSAYISIHNMAAWMIDQFGGAEVKEKYLPDLVTM 121

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-S 240
                               LTE   G+D A + +  +   D  Y L+G K F+S    +
Sbjct: 122 -------------DKIASYALTEPGSGSDAAGLKTTARLDGDH-YVLNGTKQFISGGGFN 167

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D ++ + +         +  L+ D    G+ + + + K+G  ++ T ++ F +    +  
Sbjct: 168 DVYVTMVRTSDHK-TKGITCLVIDKDTPGISFGKPEKKLGWNASPTAQVIFEDARVPVAN 226

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    M  L    L+    S+ G +  L EA+ Y + R      + D    + 
Sbjct: 227 RVGDEGEGFRFAMMGLDGGRLNIGACSLGGAQRCLDEAVAYTKDRKQFDTPISDFQNTQF 286

Query: 358 AIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +AD+A D+ AA AL +  A    D A  +S  +A A+ +A             ++ +A+
Sbjct: 287 MLADMATDLEAARALLYLAAAKVTDNAPDKSRFSAMAKRLA-------TDSGSKIVNDAL 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GY+ E  I R +R+   +SIL G+   M + V   L +
Sbjct: 340 QLFGGYGYLREYPIERFWRDLRVHSILEGTNQVMRMIVGRDLLR 383


>gi|26788031|emb|CAD58772.1| novel protein similar to human isovaleryl Coenzyme A dehydrogenase
           (IVD) [Danio rerio]
 gi|47939423|gb|AAH71451.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio]
          Length = 418

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 131/372 (35%), Gaps = 24/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK    P      +     GL        F         H I    +  ++   
Sbjct: 60  PYADEIDKKNEFPQMREFWKEMGDLGLLGVTAPVEFGGTGLGYLDHVIIMEEISRVSAAI 119

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ + E+                L ++E   
Sbjct: 120 GLSYGAHSNLCVNQMVRHGNQKQKEKYMPKLLTGEH-------------VGALAMSESNS 166

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  +   +D  I+ A+ +       +   + +   
Sbjct: 167 GSDVVSMKLTAKKQGDHYVLNGNKFWITNGSDADVLIVYAKTDPEAVARGITAFIVEKGM 226

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R ++T EL F +       +LG LN     +     L  L  A   
Sbjct: 227 PGFSSAQKLDKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLDLERLVLASGP 286

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L  AI Y   R   G  +    +M+  +AD+   +++     + +A + D+  
Sbjct: 287 VGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLYNVARACDKGH 346

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +++             +C + A  V  + ++C+GG+GYI +  + R  R++    I  
Sbjct: 347 FSAKD-------CAGVILYCAENATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEIGA 399

Query: 445 GSGNAMVLDVLN 456
           G+     + +  
Sbjct: 400 GTSEIRRIIIGR 411


>gi|288555266|ref|YP_003427201.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288546426|gb|ADC50309.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 381

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 126/375 (33%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           PG E  D     P    + ++    GL    +   +        ++ +    +       
Sbjct: 26  PGAEERDASAEFPE--DIFKKIGELGLLGIPFPEEYGGSGGDTVSYALAVEEIGRACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    K++               P+ +       GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEEQKKEYL-------------TPLAQGQSLGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A   +   G  +   L+    
Sbjct: 131 GSDAGGTQTKAVLDGDEYVINGEKCWITNASYARTVIVTAVTGKDERGKNITSALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIM 323
             G        K+G R++ T EL   +        L    G  +          +  A +
Sbjct: 191 APGFTINSNYEKMGVRASNTCELVLEDVRVPKENLLGDPQGGFKQFLYTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +   A+ Y++ R   G  +     ++  +AD+A++I  A  +  + A   D+ 
Sbjct: 251 GVGIAQAAFERALAYSKERKQFGKTISSFQAIQFKLADMAMEIELARNMVMKAAWLKDQN 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  +EAA+A       K +  + A     +A++  GG GY+ E  + R  R++    I 
Sbjct: 311 RAFGKEAAFA-------KLYASETATRTANQAIQIHGGYGYMREYEVERMLRDAKLLEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 364 EGTSEIQRLVISRQL 378


>gi|116250739|ref|YP_766577.1| Acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255387|emb|CAK06462.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 592

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/545 (19%), Positives = 196/545 (35%), Gaps = 82/545 (15%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGER-WD-KVEFHPAWHALLRRSIHDG 114
           L  LGE ++     E  R A      L       G R  D +V     W  L R  I  G
Sbjct: 28  LGDLGEDLVDAILAEAGRFATEEVAPLAEIGDRQGARLIDGEVRLPDGWRDLYRHWIAGG 87

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
            +      +F        H +  A L +         ++P++T  ++ A+    +  +  
Sbjct: 88  WNGLTAPEAFGGQALP--HMLNVAALEMWNSGSMAFGLAPTLTMGAIEAVGAHGSAALKD 145

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ S E+  T             + LTE   G+D+  + ++ ++  DG Y L G K
Sbjct: 146 KYLEKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQK 192

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    DA      ++LA++         +  FLVP+ L +     G  N L    L+
Sbjct: 193 IFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLE 252

Query: 277 NKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +K+G   + T  + + +          G+L+G+ N     +  M     L   +  V+  
Sbjct: 253 HKLGIHGSPTCTMIYGDGKFGGEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIA 312

Query: 329 RVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +A+ YAR R               +++ P + R +  +      A A+S+  A++
Sbjct: 313 EAATQKALAYARERTQGRAPGSSSAGMSPIVEHPDVARMLLTMKALTQGARAISYACAHA 372

Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            D          +    A ++ PI K +       V +  ++  GG G+IEE   AR+ R
Sbjct: 373 IDMSHRAGDISRQWQERAALLTPIAKSFSTDSGVDVASLGIQVHGGMGFIEETGAARYLR 432

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++    I  G+       L    L   G    +   + L +      +  +    ++ + 
Sbjct: 433 DARIAPIYEGTNGIQAIDLVTRKLPLSGGGQVKGFIAELREIANGVRRSNLDGFGETAAR 492

Query: 494 CK----EDKGLARFLTEKIA-------------------LASSAAALYRAGMNDIADVFL 530
                 + +    +L + +A                   L  +   L + G+ + AD   
Sbjct: 493 LDAAIVDLELATAWLIKTLADDKAAEALSGATPYQRLFGLVLTGCYLAKGGLVESADGAA 552

Query: 531 ENRFL 535
           ENR  
Sbjct: 553 ENRIA 557


>gi|107101443|ref|ZP_01365361.1| hypothetical protein PaerPA_01002483 [Pseudomonas aeruginosa PACS2]
 gi|116049966|ref|YP_791224.1| citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|313111172|ref|ZP_07796995.1| Citronelloyl-CoA dehydrogenase GnyD [Pseudomonas aeruginosa 39016]
 gi|115585187|gb|ABJ11202.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|310883497|gb|EFQ42091.1| Citronelloyl-CoA dehydrogenase GnyD [Pseudomonas aeruginosa 39016]
          Length = 387

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    + R+    GL     D  +        AH +    +   +   
Sbjct: 31  PRAAQIDQDNQFPM--DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + P + S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++ D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 VGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAYLYAVAAACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPTGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|104784029|ref|YP_610527.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95113016|emb|CAK17744.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 601

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 90/489 (18%), Positives = 183/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+        L+      G  W +  V+    +     + +  G      
Sbjct: 37  DMVNAILEEGAKFCEQVLAPLNRVGDLEGCTWSESGVKTPTGFKQAYEQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   +    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLTLSEMVGESNWSWGMYPGLSHGAMNTISEHGTPEQQETYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  NG+    L++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNGVSCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   G  G        + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQGQEGNAATKEFVEPLAAINKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT KI +A+
Sbjct: 501 LTMKIGMAA 509


>gi|91781589|ref|YP_556795.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685543|gb|ABE28743.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 376

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 72/382 (18%), Positives = 139/382 (36%), Gaps = 34/382 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P    WD+    P    + R+    G +  +   ++                    
Sbjct: 20  EAITPHAATWDRERTFP--KDVHRQLAQLGAYGVLVPETYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        ++W               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLTYGNDAQKREWL-------------TPLARGDMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +  D  Y L+G K F++S  +    I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTATREGDE-YLLNGVKQFITSGRNGHVAIVMAVTDKAAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------ 316
                 G    R+++K+G  S+ T ++ F +         N+     E  +I +      
Sbjct: 184 VPTDTPGYVVARVEDKLGQHSSDTAQIIFEDCRVPA---ANLIGAQGEGYRIALSGLEGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  SV   R +   A+ YA+ R   G  L     ++  +AD+A  + AA  L +  
Sbjct: 241 RIGIAAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQFRLADMATQLEAARQLIWHA 300

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+
Sbjct: 301 ASLKDAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRD 353

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+ +   + +   L
Sbjct: 354 VRVCQIYEGTSDIQKILIARGL 375


>gi|166714162|ref|ZP_02245369.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 387

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 149/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  AN++   L          D V   P    L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFANHHIAPL----AAAADHDNV--FPT--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    +P   + + PK+
Sbjct: 60  VEEAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASPEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +               W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGARYVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL FS+     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKLDKLGMRGSNTCELVFSDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++  A+ Y   R   G  + +  +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALPYVHERKQFGEPIGNFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|260826029|ref|XP_002607968.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae]
 gi|229293318|gb|EEN63978.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae]
          Length = 383

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 118/300 (39%), Gaps = 24/300 (8%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P++               T       L+E   G+D  A+ ++  K  D
Sbjct: 101 LHGTEEQKQKYLPRL--------------ATDTVGSFCLSESESGSDAFALKTRADKKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +S  +  F++ A  +   G   +   L D    GL   + ++K+G R+
Sbjct: 147 YWVLNGSKMWISNSEQAGLFLVFANADSSQGYKGISTFLVDRDTPGLTIDKHEDKLGIRA 206

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T  + F +       LLG L         +     +  A   V   +     A+ Y  
Sbjct: 207 SSTCPVHFEDVKIPESHLLGTLGHGYKYAIGLLNEGRIGIAAQMVGLAQGCFDHAVPYTM 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +   M+  I++IA +I AA  L +  A   +      ++AA A       
Sbjct: 267 DRKQFGQSIFNFQSMQHQISEIATEIEAARLLVYNAARLREAGHPFIKQAAMA------- 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K++  ++A    A+++E +GG G+ ++  + + YR+    +I  G+ N  +  +   L++
Sbjct: 320 KFYAAEVAAKTTAKSIEWMGGVGFTKDYPVEKFYRDCKIGAIYEGTNNIQLSTIARYLKQ 379


>gi|260903040|ref|ZP_05911435.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308108326|gb|EFO45866.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037]
          Length = 384

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPYAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKAEVAQQFSVDLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVREGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADCEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L +   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384


>gi|312377272|gb|EFR24143.1| hypothetical protein AND_11484 [Anopheles darlingi]
          Length = 389

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 141/378 (37%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK      W  L       G+        +  +      H I    +   +   
Sbjct: 34  PFAQEIDKQNEFNFWRKLGDL----GVLGVTVKPDYGGLGGSYLDHCIVNEEISRASGSI 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ + E+                L ++E   
Sbjct: 90  ALSYGAHSNLCVNQIHRHGTEEQKQRYLPKLCNGEH-------------IGALAMSEAGS 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D+ ++  +  K  D  Y L+G+K+++++  ++D +++ A+ +        +   + + 
Sbjct: 137 GSDVVSMKLRADKQGD-YYVLNGNKFWITNGSVADTYVIYAKTDASAKPQHGITAFIVER 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R + T EL F +     G +LG LN     +     L  L  A 
Sbjct: 196 GTAGFTQGPKLDKLGIRGSPTSELIFEDVKVPVGNVLGGLNKGVYVLMSGLDLERLVLAA 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA  R      + +  +++  +AD+   + A  A  + +A + D 
Sbjct: 256 GPVGLMQAACDVAFEYAHVRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARACDA 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +  ++             +C + A  +  +A++ +GG+GYI +    R  R+     I
Sbjct: 316 GHANPKD-------CAGVILYCAEKATQIALDAIQILGGNGYINDYPTGRIMRDCKLYEI 368

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 369 GAGTSEIRRMLIGRALNK 386


>gi|240277804|gb|EER41312.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 434

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 150/414 (36%), Gaps = 36/414 (8%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           H +L  L E V     QE  R      P+         R D     PA   + ++    G
Sbjct: 46  HDDLVELRERV-----QEFTR---REIPE-----EVAARTDLQNNFPA--EMWQKLGEAG 90

Query: 115 LHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                 D  +  +    QAH +    +   +        + S    + ++L  +P     
Sbjct: 91  FLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQLSLNGSPEQKAK 150

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S                   L ++E   G+D+ ++ +  + +  G        W
Sbjct: 151 FLPGLISG-------------QKIGALAMSEHSAGSDVVSMKTTAKAVDGGYLLNGTKMW 197

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F +
Sbjct: 198 ITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFED 257

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            F     +LG LN     + +   L  L  +   +  M+ +L   + Y   R   G  + 
Sbjct: 258 VFVPQENMLGALNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIA 317

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----RIMAPITKYWCCK 406
              +++  +AD+   ++A+ A ++  A   DEA + S   A               +  +
Sbjct: 318 HNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAE 377

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A     +A++ +GG+GYI E    R  R++    I  G+     + +  +  K
Sbjct: 378 RATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMLIGRVFNK 431


>gi|242790071|ref|XP_002481490.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718078|gb|EED17498.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 433

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 136/374 (36%), Gaps = 19/374 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D+    PA   + ++    G      D  +  +    QAH      +   +     
Sbjct: 72  AARTDQQNDFPA--EMWKKLGEAGFLGVTADEEYGGLGMGYQAHCTVLEEISRASGSIGL 129

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L         + P + S                   L ++E   G+
Sbjct: 130 SYAAHSQLCVNQLSLNANAEQKAKYLPGLISG-------------DKIGALAMSEHSAGS 176

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  + +  G        W  + P +D  ++ A+ E       +   + + +P G
Sbjct: 177 DVVSMKTTAKAVDGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGISAFIVEKTPKG 236

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F + F     LLG+LN     + +   L  L  +   + 
Sbjct: 237 FSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELNRGVKVLMEGLDLERLVLSAGPLG 296

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R      +    +++  +AD+   +AA+ A ++  A S DE+ + 
Sbjct: 297 IMQAALDLVLPYTHIRKQFNTPIAHNQLIQGKLADMYTKLAASRAYTYATAKSIDESSAA 356

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                           +  + A     +A++ +GG+GYI E +  R  R++    I  G+
Sbjct: 357 PSGTLIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIAAGRLLRDAKLYEIGAGT 416

Query: 447 GNAMVLDVLNLLEK 460
                + +     K
Sbjct: 417 SEIRRMVIGRAFNK 430


>gi|149375432|ref|ZP_01893202.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893]
 gi|149360137|gb|EDM48591.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893]
          Length = 388

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 81/375 (21%), Positives = 140/375 (37%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P    ++R +   G        +   +   +            A    
Sbjct: 26  PHAAKWDAEHVFPE--EVIREAGDMGFCGIYTPEAQGGMGLSRLDTSVIVEELAAACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  MVA      + K  APK+ S E+                  LTE   G
Sbjct: 84  AAYITIHNMATWMVAQFGNADIQKQIAPKMASGEW-------------LGSYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           +D   + ++  +  D  Y L+G K F+S   +    +++A+  E   G   +   +    
Sbjct: 131 SDAGNLRTKATRDGD-SYVLNGSKVFISGAGATQMLVVMARTGEPGSGPKGISAFVVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
            +G+ Y + + K+G  S  T ++ F N        L     G +  MK L    L+ A  
Sbjct: 190 SDGIHYGKAEEKMGWNSQPTRQITFENVRVPANNRLGEEGQGFMIAMKGLDGGRLNIATC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +L  A +Y   R   G  L     ++  +AD+A ++ AA  +    A   D+ 
Sbjct: 250 SLGGAQAALLRARNYMHEREQFGQSLAGFQALQFKLADMATNLVAARQMVRLAAYRLDQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +       A +   + K +       V  EA++  GG GYI E  + R+ R+   + IL
Sbjct: 310 DTE------ATLHCAMAKRFATDACFEVCNEALQLHGGYGYIREYPLERYVRDLRVHQIL 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M L V   L
Sbjct: 364 EGTNEIMRLIVARRL 378


>gi|257454746|ref|ZP_05620000.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60]
 gi|257447866|gb|EEV22855.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60]
          Length = 391

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 135/381 (35%), Gaps = 21/381 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQ 145
             P     D+ +  P    L ++    GLH      ++  V     AH +    +   + 
Sbjct: 28  ITPRAAELDRTDQFPM--DLWQKMGELGLHGITVPETYGGVDMGYVAHMVAMEEISRASG 85

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A    + S    + +    T    + + PK+ S E+                L ++E 
Sbjct: 86  SVALSYGAHSNLCINQIKRNGTDAQKQKYLPKLISGEF-------------IGALAMSEP 132

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+ ++  + +             W  + P +D  ++ A+    +G   +   L + 
Sbjct: 133 GAGSDVTSMKLRAEDKGGVYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGITAFLVEK 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS- 324
              G    +  +K+G R + T E+ F N        L      V+ +   +  + A+++ 
Sbjct: 193 GMKGFYTAQKLDKLGMRGSHTGEMVFDNVEVPSDNILGGLNNGVKVLMSGLDYERAVLAA 252

Query: 325 --VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  +     Y   R   G  + +  +++  +AD+   + A  +  + +  + D 
Sbjct: 253 GPIGLMQAVMDNVTPYIHDRKQFGQAIGEFQLIQGKVADMYTTLQAGRSFLYTVGKNLD- 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S+     R        W  + A  +  E ++  GG+GY  E  + R +R++    I
Sbjct: 312 -RLGSDHVRQVRKDCASVILWTAEKATWMAGEGIQIFGGNGYTNEYPLGRIWRDAKLYEI 370

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+     + +   L   T 
Sbjct: 371 GAGTSEVRRMLIGRELFNETA 391


>gi|300311865|ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300074650|gb|ADJ64049.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 386

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 142/380 (37%), Gaps = 27/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ ++   G        +   +   +            A    
Sbjct: 26  PFAAKWDEEAHFPL--DVIAKAGELGFCGLYTPEADGGLGLSRLDATVVFEELARACTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     + M+A    P +   W  ++                       LTE   G
Sbjct: 84  AAYLTIHNMVSWMIASWGQPSLKAQWCEQL-------------AAGRKIGSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +   ++ DG Y L+G K F+S   S D  +++A+  G  G   V  ++  G+ 
Sbjct: 131 SDAASLKTTA-RLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGE-GARGVSAIVVPGNA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y + ++K+G  S  T  + F N        L     G +  MK L    ++ A  S
Sbjct: 189 PGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRINIATCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y + R   G  + D   ++  +AD+  ++ AA  +    A   D   
Sbjct: 249 VGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAATKLDAGS 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K     +   V  EA++  GG GYI E  + R++R+   + IL 
Sbjct: 309 PE------ATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+   M + +   L    NL
Sbjct: 363 GTNEIMRVIISRKLLDRDNL 382


>gi|260433041|ref|ZP_05787012.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416869|gb|EEX10128.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 605

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 93/479 (19%), Positives = 177/479 (36%), Gaps = 55/479 (11%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEY---VLSCTAQELARMANYNTPQLHAY-GP 89
            NA + D+    ++  F  V   ++    E          +E  ++A      L+     
Sbjct: 4   YNAPTKDT--QFVLHEFLKVSQSDIPGYAELEPDFTGAVLEEAGKVAVNLLHPLNVVGDK 61

Query: 90  GGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G R++  V + P  +     +    G         +               ++  A   
Sbjct: 62  EGCRFENGVVYTPTGFKDAFEQVKEGGWPGLDMPEEYGGQNMPYVLGTAVGEMFSAANQA 121

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +  +AS +    T      + PK+ S E+  T             + LTE   
Sbjct: 122 FTMYQGLTHGAASTILAHGTDEQKNTYLPKMVSCEWTGT-------------MNLTEPHC 168

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCF 256
           GTD+  + ++ +   DG Y ++G K F+SS   D       ++LA++ G       V  F
Sbjct: 169 GTDLGLMRTKAEPQGDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPEGIKGVSLF 228

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           +VP+ L +     G  NG+   +++ K+G   N+T  + +    G+LLG  +     +  
Sbjct: 229 IVPKFLVNEDGSLGERNGVSVGKIEEKMGIHGNSTCVMNYDGAVGYLLGQEHKGMRAMFT 288

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRA 358
           M     +   +  ++    +   A+ YA+ R   G               LI  P ++R+
Sbjct: 289 MMNEARVGVGMQGLAQAEAAYQNALEYAKDRLQ-GRDVTGPKNPDGPADPLIVHPDIRRS 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAM 416
           + D    +  A A     A   D+A    ++ A     +M P+ K +       +  +A 
Sbjct: 348 LMDQKSFVEGARAFILWGATLIDKAHRAGDKDADGLISLMTPVIKGFLTDEGYDMTVQAQ 407

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
           +  GG GYIEE  ++++ R++    I  G+     LD++   L + G       F  ++
Sbjct: 408 QVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDMVK 466


>gi|260553755|ref|ZP_05826026.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405155|gb|EEW98654.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 600

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 91/526 (17%), Positives = 186/526 (35%), Gaps = 64/526 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    +  A         ++      G   ++  V     +    ++    G     
Sbjct: 37  RELIDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGFKEAYQKYAELGFTSLT 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  +         +I  + +   +          S  +   +    T +  + +  K+ 
Sbjct: 97  ADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIEHHGTEQQKQKFLTKLI 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  SDG Y ++G K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGLIRTKAEPNSDGSYSITGEKIFISAGE 203

Query: 240 SD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SPNGLCYQRLKNKIGNRS 283
            D       I+LA++         +  F+VP+     DG     N +    +++K+G   
Sbjct: 204 HDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  L F    G+L+G  N     +        + +A+  ++   +S   A+ YA+ R 
Sbjct: 264 NATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
                            +I  P ++  +           AL++ LA   D      + + 
Sbjct: 324 AMRSLSGPKYPEKNADPIIVHPAVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQ 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +         + PI K +  +         ++  GG G+I E  + +  R++  +++  G
Sbjct: 384 QKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEG 443

Query: 446 SGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC 494
           +     LD+L          LL+  T+L +Q  S  +  + L    +K+  + +  +SL 
Sbjct: 444 TTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLT 503

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           K     A+   E+I    +A+  Y    + +   +L  R     H 
Sbjct: 504 KSIAEKAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVAHE 546


>gi|92118848|ref|YP_578577.1| isovaleryl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
 gi|91801742|gb|ABE64117.1| isovaleryl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
          Length = 391

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 62/406 (15%), Positives = 140/406 (34%), Gaps = 31/406 (7%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLH 116
           G         +L   A+     +  +      P     DK    P    L  +    GLH
Sbjct: 3   GSNAPGAFNFDLGETADAIRETVRDFSENEIAPRAAEIDKTNKFP--RDLWPKLGALGLH 60

Query: 117 CSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               +  +         H I    +   +        + S    + +    +    + + 
Sbjct: 61  GITVEEDYGGAGLGYLEHCIAMEEISRGSASVGLSYGAHSNLCINQLRRNGSEAQKRKYL 120

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E                 L ++E   G+D+ ++ ++  K  D         W  
Sbjct: 121 PKLISGEN-------------VGALAMSEPGVGSDVVSMKTRADKKGDRYVLNGSKMWIT 167

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +++  ++  + +   G   +   + +    G    +  +K+G R + T EL F +  
Sbjct: 168 NGTIAETLVVYVKTDIAAGSRGITAFVIEKGLKGFSTAQKLDKLGMRGSDTCELVFEDCE 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L      +  +   +  + A+++   +  M+  +   + Y   R   G  +   
Sbjct: 228 VPEENVLGEVGSGINVLMSGLDYERAVLAAGPLGIMQACMDVVMPYVHERRQFGQPIGSF 287

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  +AD+ + + A  A  + +A + D  ++  E+AA A         +  + A    
Sbjct: 288 QLVQGKVADMYVTMNACRAYVYAVAKACDRGETTREDAAGA-------ILYAAEKATQCA 340

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A++ +GG+GYI +    R  R++    I  G+     + +   L
Sbjct: 341 LDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 386


>gi|226939151|ref|YP_002794222.1| CaiA [Laribacter hongkongensis HLHK9]
 gi|226714075|gb|ACO73213.1| CaiA [Laribacter hongkongensis HLHK9]
          Length = 386

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 143/382 (37%), Gaps = 25/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P   RWD+ E  P     LRR+   G         +  +   +             
Sbjct: 22  HELAPFAARWDEEETFPL--DTLRRAGEMGFLGLYTPACYGGLELSRLDSAIVFEELAHG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  ++     + M+A    P + + W P++ + E             +     LTE
Sbjct: 80  CTSTAAYLTIHNMVSWMIASFGAPALAEAWVPRMVTGE-------------LLGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A+++++ ++  D  Y L+G K F+S   S   +++    G  G   V   +  
Sbjct: 127 PGAGSDAASLSTRAERHGDH-YVLNGSKMFISGAGSTQVLVVMARTGGPGAKGVSAFVVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y + + K+G  S  T  + F      +   L     G    MK L    ++ A
Sbjct: 186 ADAAGVRYGKKEKKMGWNSQPTRSISFEEVSIPVANRLGEEGEGFTFAMKGLDGGRINIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  A  Y   R   G  L     ++  +AD+  ++ AA  +    A   D
Sbjct: 246 TCAVGTAQAALDAAQRYVGERRQFGAPLAQLQNIQFRLADMLTELVAARQMVRLAAWQLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +        A     + K     +A  V  +A++C GG GY+++  + RH R+   + 
Sbjct: 306 QQQPE------AGCYCAMAKRLATDLAFNVANQALQCFGGYGYLKDFPLERHVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           IL G+ + M L +   L +   
Sbjct: 360 ILEGTNDIMRLIIARRLLQEGA 381


>gi|312222404|emb|CBY02344.1| similar to isovaleryl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 443

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 134/360 (37%), Gaps = 20/360 (5%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R+    G      D  F  +    QAH +    L   +        + S    + + 
Sbjct: 94  ELWRKFGEAGFLGVTADEQFGGLAMGYQAHCVIMEELSRASGSIGLSYAAHSQLCVNQLM 153

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +      + P + S                   L ++E   G+D+ ++ +  +++  
Sbjct: 154 LNGSAEQKSRYLPGLISG-------------DKVGALAMSEHSAGSDVVSMKTTAKEVDG 200

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  + P +   ++ A+ +       +   + D +  G    +  +K+G R 
Sbjct: 201 GYLLNGTKMWITNGPDAHTIVVYAKTQPDAASKGITAFIVDTTTPGFSVTKKLDKLGMRG 260

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F + F     +LG LN     + +   L  L  +   +  M+ +L  A+ Y  
Sbjct: 261 SNTGELVFEDVFVPRENVLGQLNRGVRVLMEGLDLERLVLSAGPLGLMQAALDNALPYTH 320

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +    +++  +AD+   + A+ + ++ +A + DE+    +            
Sbjct: 321 QRKQFGIPIAHNQLVQGKLADMYTKLRASQSFTYAVARAVDESYQSPD---VKTQDCAGA 377

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  + A  V A+A++ +GG GY+ E  + R  R++    I  G+     + +     K
Sbjct: 378 ILYAAERASEVAADAIQLMGGMGYMNEVPVGRILRDAKLYEIGAGTSEVRRMVIGRAFNK 437


>gi|225554498|gb|EEH02795.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 434

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 150/414 (36%), Gaps = 36/414 (8%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           H +L  L E V     QE  R      P+         R D     PA   + ++    G
Sbjct: 46  HDDLVELRERV-----QEFTR---REIPE-----EVAARTDLQNNFPA--EMWQKLGEAG 90

Query: 115 LHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                 D  +  +    QAH +    +   +        + S    + ++L  +P     
Sbjct: 91  FLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQLSLNGSPEQKAK 150

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S                   L ++E   G+D+ ++ +  + +  G        W
Sbjct: 151 FLPSLISG-------------QKIGALAMSEHSAGSDVVSMKTTAKAVDGGYLLNGTKMW 197

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F +
Sbjct: 198 ITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFED 257

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            F     +LG LN     + +   L  L  +   +  M+ +L   + Y   R   G  + 
Sbjct: 258 VFVPQENMLGALNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIA 317

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----RIMAPITKYWCCK 406
              +++  +AD+   ++A+ A ++  A   DEA + S   A               +  +
Sbjct: 318 HNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAE 377

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A     +A++ +GG+GYI E    R  R++    I  G+     + +  +  K
Sbjct: 378 RATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMLIGRVFNK 431


>gi|154285672|ref|XP_001543631.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150407272|gb|EDN02813.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 434

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 150/414 (36%), Gaps = 36/414 (8%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           H +L  L E V     QE  R      P+         R D     PA   + ++    G
Sbjct: 46  HDDLVELRERV-----QEFTR---REIPE-----EVAARTDLQNNFPA--EMWQKLGEAG 90

Query: 115 LHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                 D  +  +    QAH +    +   +        + S    + ++L  +P     
Sbjct: 91  FLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQLSLNGSPEQKAK 150

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S                   L ++E   G+D+ ++ +  + +  G        W
Sbjct: 151 FLPSLISG-------------QKIGALAMSEHSAGSDVVSMKTTAKAVDGGYLLNGTKMW 197

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F +
Sbjct: 198 ITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFED 257

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            F     +LG LN     + +   L  L  +   +  M+ +L   + Y   R   G  + 
Sbjct: 258 VFVPQENMLGALNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIA 317

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA----RIMAPITKYWCCK 406
              +++  +AD+   ++A+ A ++  A   DEA + S   A               +  +
Sbjct: 318 HNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAE 377

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A     +A++ +GG+GYI E    R  R++    I  G+     + +  +  K
Sbjct: 378 RATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMLIGRVFNK 431


>gi|330956958|gb|EGH57218.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 592

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 89/493 (18%), Positives = 170/493 (34%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVDAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMINSASLAFGLYAMLTSGACVSINTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +   D  Y ++G
Sbjct: 148 KAKFLPNMYSGAW-------------AGSMCLTEAHAGTDLGMIRTRAEPQPDDTYRITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSVGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDAVGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVQSYQN 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           AI YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AIEYALDRIQSRAPTGAQNTDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R        ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSDDDTARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N   ++     + Q + +S   +    R   S  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFISASDSALSEFTRPLTSAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTAWVLDR 507


>gi|325519911|gb|EGC99174.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 393

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 137/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R A  N        P     D+ +  P    L R+    G+        +   
Sbjct: 12  GEDIEMLRDAVANFA-AKEIAPRAAEVDRTDQFPM--DLWRKFGELGVLGMTVGEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    T    + + PK+ S E+   
Sbjct: 69  NMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTAAQKQKYLPKLVSGEH--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P  D  ++ 
Sbjct: 126 ----------IGALAMSEPNAGSDVVSMKLRANKRGDRYVLNGTKMWITNGPDCDTLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + +    G    +  +K+G R + T EL F +        L    
Sbjct: 176 AKTDVDAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A++S      M   L   + Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGVKVLMSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               A  A  + +    D A   S+     R        +  + A  +  EA++ +GG+G
Sbjct: 296 TTFQACRAYLYAVGRHLDSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|296283350|ref|ZP_06861348.1| acyl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 381

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 82/404 (20%), Positives = 155/404 (38%), Gaps = 31/404 (7%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G++ LS     +  MA   T       P   +WD+    P     ++++   G       
Sbjct: 3   GQFQLSDDQLAIQDMAQRFTA--DNITPHAGKWDEDHHFPV--DTIKQTAELGFGAIYVS 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    +S    ++ M+       V + + P++ + 
Sbjct: 59  EESGGIGLGRLEAALIMEAMAYGCPTTSAFISIHNMASWMIDRFGGEGVKEKYLPQLVTM 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E                   LTE   G+D A + +Q     D  Y L+G K F+S   ++
Sbjct: 119 E-------------KLASYCLTEPGSGSDAAGLKTQAVLDGDH-YVLNGTKQFISGGGVN 164

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D ++ + +  G      +  L+ D    G+ +   + K+G  ++ T ++ F +    +  
Sbjct: 165 DVYVTMVRT-GEHKTKGITCLVVDKDTPGVSFGAPEKKLGWNASPTAQVIFEDARVPVEN 223

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    M  L    L+    S+ G +  L EA+ Y + R      + D    + 
Sbjct: 224 RVGDEGEGFRFAMMGLDGGRLNIGACSLGGAQRCLDEAVKYTKERQQFDQQIADFQNTQF 283

Query: 358 AIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            +AD+A D+ AA AL +  A    D A  +S  +A A+ +A             V+ +A+
Sbjct: 284 MLADMATDLEAARALLYLAAAKVTDNAPDKSRFSAMAKRLA-------TDNGSKVVNDAL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GY+++  I R++R+   +SIL G+   M + V   L +
Sbjct: 337 QLFGGYGYLKDYPIERYWRDLRVHSILEGTNQVMRMIVGRDLLR 380


>gi|329851045|ref|ZP_08265802.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
 gi|328839891|gb|EGF89463.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
          Length = 371

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 137/376 (36%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P    ++R +   G                +   +          +  
Sbjct: 23  PYAGLWDETKHFPV--EVMREAAGLGFAAIYTGEEHGGSGLSRLDGVIIFEQLSRGCIAT 80

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       M+    +  +   W PK+ + E                   LTE   G
Sbjct: 81  AAFLSIHNMCTWMIDSFGSSDLRAQWVPKLATME-------------TIASYCLTEPGSG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  +  D  + L+G K F+S   +SD ++++A+++       +   L     
Sbjct: 128 SDAASMKTRAVRDGD-SFVLNGSKQFISGAGVSDLYVVMARLDD-----GISTFLVVKDT 181

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL +   + K+G  +  T ++ F N        L     G    MK L    L+ A  S
Sbjct: 182 PGLSFGANEKKMGWNAQPTRQVTFDNLCIPADNLLGTPGDGFKYAMKGLDGGRLNVAACS 241

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L  A+ YA  R   G  L      +  +AD+  +++A+  L +  A   D   
Sbjct: 242 LGGAQDALDRALAYAGERSQFGKHLNAFQATQFKLADMETELSASRTLLYEAAAKLDAKT 301

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +       +  +A++  GG GY+ +  + R  R+   + IL 
Sbjct: 302 PD------ATRWCAMAKRFVTDTCSKIANDALQIHGGYGYLHDYGVERIVRDLRVHQILE 355

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M + +   + K
Sbjct: 356 GTNEIMRVIIARDMLK 371


>gi|319763877|ref|YP_004127814.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118438|gb|ADV00927.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 612

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 125/495 (25%), Positives = 206/495 (41%), Gaps = 26/495 (5%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTP 82
                G++ +  D  L  L+  +            L+ LG+        ELA +A+ + P
Sbjct: 26  ASDCAGLDFFEIDPGLQQLLPLYVPQAELQYFLPHLKRLGQLAGGR-LNELATVADKHGP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LHA    GE  D VE+HPA+  +   +      H               +   + A  Y
Sbjct: 85  VLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGTLSPVTKYAFQY 144

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G +   SVT  S  ++    +  +      ++          A   +      
Sbjct: 145 LFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLQRML---------AEKLEDLWKGT 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  + +   ++ DG + L G KWF S   +D  ++LA+ E        +
Sbjct: 196 QFMTEKAGGSDVGQVETTA-RLIDGQWHLFGEKWFSSHVDADVALILARPENAPAGTRGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR  EDGS N     RLK+K+G RS A+ EL     F +L+GD       + +  
Sbjct: 255 ALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAFAYLVGDPTRGLKQMMEQV 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  A+ + + MR  L EA+  A  RH  G  ++D P+M+R +  I +   AA +++
Sbjct: 315 NLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLMQRQLLKIMVPTEAALSVT 374

Query: 374 FRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A+   +  +  ++AA A R++ P+ K   C+    V   AME  GG+GYIE+   AR
Sbjct: 375 LATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATGAMEVRGGNGYIEDFVNAR 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++    +  G+ N   LD +    +       L + L + L         + R    
Sbjct: 435 LVRDAHIGVLWEGTSNINALDAIGRAVRKDRAHLALQAVLREKLHGVQHSAPDMARQLGH 494

Query: 493 LCKEDKGLARFLTEK 507
              +   LA  +  +
Sbjct: 495 ALDQAIALAETVATR 509


>gi|28900976|ref|NP_800631.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366187|ref|ZP_05778647.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260879829|ref|ZP_05892184.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260894503|ref|ZP_05902999.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|28809422|dbj|BAC62464.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086388|gb|EFO36083.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member
           8) (acad-8) (activator-recruitedcofactor 42 kda
           component) (Arc42) [Vibrio parahaemolyticus Peru-466]
 gi|308092698|gb|EFO42393.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308114759|gb|EFO52299.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 384

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 80/400 (20%), Positives = 142/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPYAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKAEVAQQFSVDLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVREGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADCEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH+R+   + IL G+   M L +   L
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIISRRL 376


>gi|220922793|ref|YP_002498095.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219947400|gb|ACL57792.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 592

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 91/493 (18%), Positives = 183/493 (37%), Gaps = 56/493 (11%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHP 101
            L       +H +L      +     +E  R A+     L+      G   +   V   P
Sbjct: 19  GLDRAIAEGLHGDLTP---DLAEAILEEAGRFASDVVAPLNQVGDRQGAVLEDGTVTMPP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R     G +       +               ++  A +  G     +      
Sbjct: 76  GFREAYRTWSEAGWNALPGPVEYGGQGLPLLLNAPCVEMWNAASMSFGLGPLLTAGGVEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   +  + + +  K+ S E+                + LTE + G+D++ + ++ +  
Sbjct: 136 LAKHGSESLRERYLAKLVSGEW-------------TATMNLTEPQAGSDLSGLRTRAEPA 182

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y + G K F++    D       ++LA++EG       +  F+VP++L DGS N L
Sbjct: 183 GDGSYRIRGEKIFITWGEHDLTDNIVHLVLARIEGAPAGTKGISLFVVPKVLPDGSRNDL 242

Query: 271 CYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               L++K+G   + T  + +       G+L+G+ N     +  M     L   +  V  
Sbjct: 243 RCAGLEHKLGIHGSPTCTMVYGEKGGAVGWLVGEANRGLACMFTMMNNARLCVGLQGVGI 302

Query: 328 MRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              +I+ P ++R +  +     AA  + +  A +
Sbjct: 303 AERAYQQALSYARERRQGRAGAAASGMSPIIEHPDVQRMLLTMKAMTGAARGICYLTAEA 362

Query: 380 FDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D A    +EA        A ++ P+ K +   +   V +  ++  GG GY+EE   A+H
Sbjct: 363 LDRAHRAPDEAERRAALDRASLLTPVAKAFSTDIGIEVASLGIQVHGGMGYVEETGAAQH 422

Query: 434 YRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFST------LEQDLGSSGKKVI 484
            R++   +I  G+     +D++     L+ G  +  Q+ +       + ++   +     
Sbjct: 423 LRDARIAAIYEGTNGIQAIDLVTRKLPLQDGAVVRGQIAAMRGIAERVLREASPAFGFTA 482

Query: 485 TILRDSISLCKED 497
             LR++I      
Sbjct: 483 PRLREAIGSLDTA 495


>gi|256059546|ref|ZP_05449745.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261323514|ref|ZP_05962711.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261299494|gb|EEY02991.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
          Length = 384

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGVLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|113866489|ref|YP_724978.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113525265|emb|CAJ91610.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 595

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 165/447 (36%), Gaps = 65/447 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D  F          I      ++        M 
Sbjct: 71  DGVVKAPTGFKEAYQQYVEAGWPALACDPEFGGQGLPI--VINNVVYEMLNSAGQAWTMY 128

Query: 154 PSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P ++  +  AL    TP + + + PK+ S  +  T             + LTE   GTD+
Sbjct: 129 PGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGTDL 175

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPR 260
             + S+ +  +DG Y +SG K F+S+   D       ++LA++         +  F+VP+
Sbjct: 176 GILRSKAEPQADGSYLISGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPK 235

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            + D     G  NG+    +++K+G   NAT  +      G+++G+ N     +  M   
Sbjct: 236 FIPDANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNA 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIA 363
             L      +    V+   ++ YA+ R                  +I  P ++R +    
Sbjct: 296 ARLGVGAQGLGLTEVAYQNSLAYAKDRLQMRALTGPKAPDKPADPIIVHPDVRRMLLTQK 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAME 417
                  A S+  A   D   S  +EA          ++ P+ K +    A     E M+
Sbjct: 356 AYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFTSTNEGMQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GYI E  + ++ R++  N I  G+     LD+L     G             D+G
Sbjct: 416 VFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQALDLLGRKILG-------------DMG 462

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           +  K    I+++ +     ++ +  F+
Sbjct: 463 ARMKAFGKIVQEFVEAEGTNEAMQEFI 489


>gi|296160996|ref|ZP_06843807.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295888695|gb|EFG68502.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 595

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 165/446 (36%), Gaps = 63/446 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +     + +  G      D  +       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + + + PK+ +  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            + ++ +  SDG Y +SG K F+SS   D       ++LA++         +  F+VP+ 
Sbjct: 177 ILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+L+G+ N     +  M    
Sbjct: 237 VPNEAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    V+   ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG G+I E  + ++ R++  N I  G+     LD+L     G             D+G+
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILG-------------DMGA 463

Query: 479 SGKKVITILRDSISLCKEDKGLARFL 504
             KK   ++ D +        +  F+
Sbjct: 464 KMKKFGKLVSDFVEAEGVKPEMQEFI 489


>gi|289669926|ref|ZP_06491001.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 387

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 147/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A ++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFAGHHIAPL----AAAADHDNV--FPA--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  +        AH +    +            + S    + +    +P   + + PK+
Sbjct: 60  VEEEYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASPEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRYVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGSFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|118591104|ref|ZP_01548503.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118436180|gb|EAV42822.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 391

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 146/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     + +Y      P  E+ D+ ++ P    L       GLH    +  +  
Sbjct: 12  DLGETADMLRDTVRSYSQDRIAPLAEKIDREDWFP--RELWPEMGELGLHGITVEEEWGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +    +    K +  K+ + E+  
Sbjct: 70  SGLGYLEHCIAMEEVSRASASIGLSYGAHSNLCVNQLRRWGSDEQKKRYLNKLVTGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K  D         W  + P +D  I+
Sbjct: 128 -----------LGALAMSEPGAGSDVVSMKLRAEKKGDRYVLNGSKMWITNGPSADTMII 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L + S  G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPEAGPKGITAFLVEKSFPGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGQV 236

Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++      M+ ++   I Y   R   G  +    +++  +AD+
Sbjct: 237 GKGVNVLMSGLDYERAVLAAGAVGIMQAAMDVVIPYIHEREQFGQPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A  +  + +A + D  ++  E+AA A         +  + A  +  +A++ +GG+
Sbjct: 297 YVTMNATKSYVYAVAKACDRGETTREDAAGA-------ILYAAENATKLALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R  R++    I  G+     + +   +
Sbjct: 350 GYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREI 385


>gi|83311698|ref|YP_421962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946539|dbj|BAE51403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 383

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 137/378 (36%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P  ER  + +  PA   ++      GL        +  +      ++  A  +   +   
Sbjct: 25  PNEERIAEDDALPA--EIIAEMKDLGLFGLSIPEEYGGLGLTMEEEVLCAFEIGQTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +   +  + +  T    + + P++ + E             +     LTE   
Sbjct: 83  RSIFGTNNGIGSQGIIIDGTEEQKQKYLPRLATGE-------------LIASFALTEPNA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D A++ +  +K  D        ++  ++P +  F ++A+ +    G   +   + +  
Sbjct: 130 GSDAASLRTTARKDGDHYIVNGTKRFITNAPEASIFTLMARTDPNNKGAGGISAFIVEAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAI 322
             GL   ++  K+G +   T ++ F +        +      G    MK+L    L  + 
Sbjct: 190 SPGLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGIEGQGFKTAMKVLDRGRLHISA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V      + +++ YA  R   G  + +  +++  +AD   +  AA  +    A   D+
Sbjct: 250 TCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLADSRTEAYAARCMVLDAARKKDQ 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S EAA         K +  +    +   A++  GG+GYI +  I R YR+     I
Sbjct: 310 GINVSTEAA-------CCKMFASEAVGRIADRAVQVHGGAGYISDYGIERFYRDVRLFRI 362

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 363 YEGTTQIQQLVIARNMLK 380


>gi|107025485|ref|YP_622996.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116693333|ref|YP_838866.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|254249891|ref|ZP_04943211.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|105894859|gb|ABF78023.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
 gi|116651333|gb|ABK11973.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
 gi|124876392|gb|EAY66382.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 393

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 132/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|301059557|ref|ZP_07200469.1| putative gas vesicle protein GvpC repeat protein [delta
           proteobacterium NaphS2]
 gi|300446322|gb|EFK10175.1| putative gas vesicle protein GvpC repeat protein [delta
           proteobacterium NaphS2]
          Length = 385

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 151/374 (40%), Gaps = 23/374 (6%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            +R ++ EF      ++     + L  + +  +F                   A      
Sbjct: 29  AQRDERAEFP---WDMVELLRENALFGADYPEAFGGSEMGLFSLCLIIEEIAKACASTSV 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++       + + L  +    K + PK+ + E+              +  GLTE   G+D
Sbjct: 86  ILLVHELGTTPIMLAGSDEQKKRYFPKLATGEH-------------LVAFGLTEPNAGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLEDGSPN 268
           ++ + ++  +  +  Y ++G K F+S    +D   + A+ +  V G       + +   +
Sbjct: 133 VSGLKTRAVRDGED-YIINGTKIFISHADIADVICIAARTDTTVPGPRGTGIFIVEKGSS 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    + ++K+G R ++TVE+   +       LLG  ++    +     L  +  A  +V
Sbjct: 192 GFTIGKHEDKMGVRGSSTVEIILEDVRVPAKNLLGGESLGFPILMKTLDLTRIPVASQAV 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384
              + +L  AI Y + R   G  L     ++  +AD+A  + AA  L+++ A+ F++  K
Sbjct: 252 GIAQGALDYAISYTKERTQFGKPLFSFQGLQWMMADMATQVEAARQLTYKAASVFEKFPK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +       A   + + K +  + A  V  +A++ +GG G+++E  + R  R++    I  
Sbjct: 312 NLDRLPKEAVRQSAMAKLFAGETAMKVTTDAVQLLGGYGFVKEYPVERMMRDAKITQIYE 371

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 372 GTSQIQKVVISATL 385


>gi|301787025|ref|XP_002928931.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 414

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 140/375 (37%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   A +++    GL        F            A           
Sbjct: 57  PIAAQVDKEHCFPT--AQVKKMGELGLLAMDVPEEFSGAGLDYLAYAIAVEEISRGCAST 114

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +      L            K  S+E       P           L+E   G
Sbjct: 115 GVIMSVNNSLYLGPIL------------KFGSKEQKQQWITPFTGGDKIGCFALSEPGNG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  + A ++ A  +  +    +   L      
Sbjct: 163 SDAGATSTTARAEGDSWVLNGTKAWITNSWEASAAVVFASTDRSLQNKGISAFLVPMPTP 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL   + ++K+G R+++T  L F +       LLG+  +          +  +  A  ++
Sbjct: 223 GLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGEPGMGFKIAMQTLDMGRIGIASQAL 282

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A++YA  R   G  L     ++  +AD+AL + ++  L++R A   D  K 
Sbjct: 283 GIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMALALESSRLLTWRAAMLKDNKKP 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++EAA A++ A        + A AV  +A++ +GG GY+ E    RHYR++    I  G
Sbjct: 343 FTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGYVTEMPAERHYRDARITEIYEG 395

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L K
Sbjct: 396 TSEIQRLVIAGHLLK 410


>gi|62317167|ref|YP_223020.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269149|ref|YP_418440.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022426|ref|YP_001932167.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237816726|ref|ZP_04595718.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254698445|ref|ZP_05160273.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731893|ref|ZP_05190471.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260544401|ref|ZP_05820222.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260759666|ref|ZP_05872014.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260762908|ref|ZP_05875240.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62197360|gb|AAX75659.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82939423|emb|CAJ12380.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021000|gb|ACD73721.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237787539|gb|EEP61755.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260097672|gb|EEW81546.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260669984|gb|EEX56924.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260673329|gb|EEX60150.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 384

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIIERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKMLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|126173735|ref|YP_001049884.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|217974012|ref|YP_002358763.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|125996940|gb|ABN61015.1| Butyryl-CoA dehydrogenase [Shewanella baltica OS155]
 gi|217499147|gb|ACK47340.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 385

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 143/394 (36%), Gaps = 27/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A     +     P   +WD+    P    +++++   G        S   +
Sbjct: 7   DDQRQFADLARQFAAE--ELTPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGGM 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                   +++    +  MV    T  + + W+            
Sbjct: 63  GLSRLDASIIFEELAKGCTATTAMLTIHNMATWMVTTWGTETLRQTWSE----------- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++ 
Sbjct: 112 --PLTTGQMLASYCLTEPGAGSDAASLQTKAVRDGDE-YVISGSKMFISGAGATELLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G+ G   +  +       G+ Y + ++K+G  +  T ++ F N    +   L     
Sbjct: 169 CRTGQAGPKGISAIAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A 
Sbjct: 229 GFAFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D           A     + K +   +   V   A++  GG GY
Sbjct: 289 ELVAARQMVRLAAFKLDSHDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  + RH+R+   + IL G+   M L +   L
Sbjct: 343 IREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|94309330|ref|YP_582540.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93353182|gb|ABF07271.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 595

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 86/444 (19%), Positives = 161/444 (36%), Gaps = 64/444 (14%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    ++ +  G      D  F          I  A   ++        M P +
Sbjct: 74  VRAPKGFKEAYQQFVEAGWPALACDPEFGGQGLPI--MINNALYEMLNSAGQAWTMYPGL 131

Query: 157 TSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  AL    TP + + + PK+ S  +  T             + LTE   GTD+  +
Sbjct: 132 SHGAYEALHAHGTPELKQTYLPKLVSGVWTGT-------------MCLTEPHCGTDLGIL 178

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLE 263
            S+ +  +DG Y ++G K F+S+   D       ++LA++         +  F+VP+ + 
Sbjct: 179 RSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIP 238

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           D     G  NG+    +++K+G   NAT  +      G+++G+ N     +  M     L
Sbjct: 239 DANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
                 +    V+   ++ YA+ R                  +I  P ++R +       
Sbjct: 299 GVGAQGLGLTEVAYQNSLAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYA 358

Query: 367 AAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               A ++  A   D   S  +E           ++ P+ K +    A     E M+  G
Sbjct: 359 EGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFTSTNEGMQVFG 418

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G GYI E  + ++ R++  N I  G+     LD+L     G             D+G+  
Sbjct: 419 GHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLG-------------DMGAKL 465

Query: 481 KKVITILRDSISLCKEDKGLARFL 504
           K    I++  +      + +  F+
Sbjct: 466 KAFGKIVQTFVEEEGTSEAMQEFV 489


>gi|270157177|ref|ZP_06185834.1| isovaleryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289164420|ref|YP_003454558.1| acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269989202|gb|EEZ95456.1| isovaleryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857593|emb|CBJ11431.1| putative acyl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 386

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 134/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  H L ++    GL        +    +   AH I    +   +   
Sbjct: 30  PLAAQIDETNTFP--HHLWKKLGEMGLLGITISEEYGGANMGYLAHVIAMEEISRASASV 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L       + +  K+ S EY                L ++E   
Sbjct: 88  GLSYGAHSNLCVNQIYLNGNHSQKQKYLSKLVSGEY-------------IGALAMSESNS 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   +         W  + P +D  ++ A+ +       +   L +   
Sbjct: 135 GSDVVSMQLDARPAGNKYILNGTKMWITNGPDADVLVVYAKTDKHAASKGITAFLIEKGM 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         +LG++N     +           A   
Sbjct: 195 PGFKTAQKLDKLGMRGSNTCELVFEECEVPEEQVLGEVNQGVKVLMSGLDYERTILAAGP 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R      + +   ++  +AD+  D++A+ A  + +A + D+  
Sbjct: 255 VGIMQACMDVVLPYVHERKQFEQPIGEFQFIQGKLADMYTDLSASRAYLYTIAKACDQGM 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 315 VSRKDAA-------SVILYTAERATQMALQAIQILGGNGYINEYPTGRLLRDAKLYEIGA 367

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+     + +   L K T
Sbjct: 368 GTSEIRRMLIGRELFKET 385


>gi|260425978|ref|ZP_05779957.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260420470|gb|EEX13721.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 375

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 82/398 (20%), Positives = 134/398 (33%), Gaps = 33/398 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              QE  R       Q     PG  R D     P     L      G    +    +   
Sbjct: 4   DELQEQIRDGVRAFAQ-DRLAPGAARRDAEHAFPL--EELAEMGELGFLGMLVPEQYGGS 60

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A      ++S   +   M  L   T      + PK+   ++   
Sbjct: 61  DLGMVAYALALEEIAAADGACSTIVSVHSSVGCMPILRFGTEEQKAKYLPKMAQGKW--- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                       G  LTE   G+D +AI ++  +  D        ++  S    D  I  
Sbjct: 118 ----------IGGFALTEPHTGSDASAIRTKAVRDGDHYVLNGSKQFITSGKNGDVIITF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G     ++ K+G  S+ T  L F+      L   N+  
Sbjct: 168 AVTDPTAGKKGISAFIVPTDTPGYEVMAVERKLGQHSSDTCALAFNEMR---LPAENLLG 224

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E  +I +       +  A  +V   R +   A  YAR RH  G  +++Q  +   +A
Sbjct: 225 AEGEGYRIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRHAFGKPILEQQAVAFKLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  +    A   +  +    EA+ A++MA        +MA  V + A++  G
Sbjct: 285 DMATRIEAARQMVLHAAALREAGRPCLTEASMAKLMA-------SEMAEEVCSGAIQIHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+     L +   L
Sbjct: 338 GYGYLADYPVERIYRDVRVCQIYEGTSEVQRLVIARGL 375


>gi|296137031|ref|YP_003644273.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797153|gb|ADG31943.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 598

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 105/543 (19%), Positives = 194/543 (35%), Gaps = 78/543 (14%)

Query: 29  PLFIGMNAYSSDSLLVA--LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           P    M  +    +L A  ++   P     +       +++   +E  +  +     L+A
Sbjct: 6   PPLRDM-QFVMHEVLDATTVLKELPPYAEVD-----ADLINQVCEEAGKFCSEVLQPLNA 59

Query: 87  Y-GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
                G  +D     V     + A   + +  G      D  F        H + +A   
Sbjct: 60  SGDAEGCHYDAATHTVTTPKGFKAAWDQFVQAGWTSLTADAEFGGQGLP--HLVGSAVHE 117

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +         M P +T      L    +      + PK+ + E+  T             
Sbjct: 118 MQNAANQAWTMYPGLTQGVTELLNAHGSAEQKALYMPKLVAGEWTGT------------- 164

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   GTD+  I ++     DG Y L+G K F+SS   D       ++LA++ G   
Sbjct: 165 MCLTEPHCGTDLGLIRTKAVPQDDGSYKLTGQKIFISSGEHDLTDNIIHMVLAKLPGAPE 224

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ +       G  NG+    +++K+G  +N+T ++   +  G+++G+ N
Sbjct: 225 GSKGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPN 284

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  M     L   + S+    V+   A+ YAR R                  ++ 
Sbjct: 285 KGLAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILV 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R +            L++ ++   D      +A+ R +      ++ PI K +  
Sbjct: 345 HPDVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFIT 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                   E ++  GG GYI E  + +  R++  N I  G+     LD+L          
Sbjct: 405 DNGLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG--------- 455

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMND 524
                 +  D G+  +K   IL D I     ++ +  F+     LA     L    GM  
Sbjct: 456 ----RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKA 511

Query: 525 IAD 527
           +AD
Sbjct: 512 MAD 514


>gi|304311073|ref|YP_003810671.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796806|emb|CBL45018.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 596

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 89/498 (17%), Positives = 181/498 (36%), Gaps = 59/498 (11%)

Query: 54  VHKELELLG-----EYVLSCTAQELARMANYN-TPQLHAYGPGGERW--DKVEFHPAWHA 105
             K  + LG       ++     E A+       P  H+    G R    KV   P +  
Sbjct: 21  AEKHYQSLGFSDVNRELIDTILAESAKFTEQELDPIRHSGDEIGARLTDGKVVTPPGFTE 80

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
                  +G         +       +  I    +   A +      + +  +   +   
Sbjct: 81  AFNAYRENGWAAMSCATEWGGQGLPHSLMILFHEMAFTANVAWCAAGTLTHGAIRAIEAH 140

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +  +   + PK+ S E+  T             + LTE + G+D+  + ++ +  +DG 
Sbjct: 141 ASDELKAAYLPKLVSAEWTGT-------------MCLTEPQAGSDVGLVKTRAEPENDGS 187

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL-----EDGSPNG 269
           Y ++G K F++   +D       ++LA++         +  F+VP+ L     E GS N 
Sbjct: 188 YRITGTKIFITQGENDYSTNIIHLVLARLPDAPKGPKGISLFIVPKFLPTPKNEPGSRNA 247

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    L+ K+G +++ T  L F    G+++G  N     +  M     LD  I  +    
Sbjct: 248 VSCGALEKKMGLKASPTCVLNFDGATGWMIGSPNGGLAAMFTMMNAARLDVGIEGLGAAE 307

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +S   A+ YAR R                  +I  P ++R +           AL++ +A
Sbjct: 308 LSFQGALAYARERLQMRAPTEPVCPEKPADPIIAHPDVRRMLMTQKALSEGCRALAYSIA 367

Query: 378 NSFDE-----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + D         + + A    ++ PI K +            ++  GG GYI E  + +
Sbjct: 368 LALDTQDHASGDVKKQAADLIALLTPINKAFLTDRGLECANYGVQVFGGHGYICENGMEQ 427

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD----LGSSGKKVITILR 488
             R+     I  G+      D++     G+   + +F  ++Q     LG+  +++ +++ 
Sbjct: 428 IVRDVRIALIYEGTNGIQANDLIGRKLAGSRG-KLVFDYIDQAEAFCLGNKFERLASMVA 486

Query: 489 DSISLCKEDKGLARFLTE 506
                 KE + ++  + +
Sbjct: 487 SLQQHLKEWRQISEHILD 504


>gi|257462314|ref|ZP_05626729.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium sp.
           D12]
 gi|317059980|ref|ZP_07924465.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
 gi|313685656|gb|EFS22491.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12]
          Length = 378

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 136/404 (33%), Gaps = 42/404 (10%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLH 116
            Y++S  AQ+L         N    Q   Y   GE          W   +  ++I  G H
Sbjct: 2   AYLISEEAQDLLEDVKKFCENEVKEQCKEYDVTGE----------WPKEIYDKAIEQGYH 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F      +           +A       +S S  +   V +  T    +    
Sbjct: 52  ALEVPEEFGGPGLSRVDVAALLEEMAIADAGFATTISASGLAMKPVLIAGTEEQKQRMCD 111

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +    +                  LTE   G+D  A  +   K  D  Y L+G K F++
Sbjct: 112 LVLEGGF--------------GAFCLTEPGAGSDAGAGKTTAVKDGDD-YILNGRKCFIT 156

Query: 237 SPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +  + + A  +   G   +   L +    GL     +NK+G R++ T ++   +  
Sbjct: 157 NAEVAAFYCITAMTDKSKGLKGMSMFLVEKGTPGLSTGNHENKMGIRTSNTADVVLEDCR 216

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    MK L         ++    +  + EA+ Y + R   G  ++  
Sbjct: 217 VPASALVGKEGEGFAIAMKTLDQARAWMGCIATGIAQRGIREAVAYGKERIQFGKPVLKN 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A  +        D     ++E+A       I K +   ++  V 
Sbjct: 277 QGLQFKIADMEIKTETARQMVAHALTKMDLGLPYAKESA-------IAKCYAGDISMEVS 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +EA++  GG GY  E  + +  R++    I  G+     + V N
Sbjct: 330 SEAIQVFGGYGYSREYPVEKLIRDAKIFQIFEGTNEIQRIVVAN 373


>gi|229829340|ref|ZP_04455409.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM
           14600]
 gi|229792503|gb|EEP28617.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM
           14600]
          Length = 384

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 123/375 (32%), Gaps = 31/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +    G       R +         + +    L  +    
Sbjct: 26  PLAKDVDEEERFP--RETIEKMAKAGFLGIAVPREYGGQGCDPLTYVMAIEELAKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L + S      +    T    + +               P+ K        LTE   
Sbjct: 84  AVALSAHSSLCCDPILNYGTEEQKQKFL-------------VPLAKGEKLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLL 262
           GTD     ++  ++ DG        +  +   +D +I++A  +           L    +
Sbjct: 131 GTDAQGAQTKAVEVEDGWVLNGSKCFITNGKEADIYIIIAVTDTVEDKRGRSKKLFSAFI 190

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLD 319
            +    G  +   + K+G R +AT EL F +        L     G  E M  L    + 
Sbjct: 191 VEKGTPGFTFGTKEKKMGIRGSATYELIFQDCKIPKENLLGRRGKGFQEAMHTLDGGRIG 250

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++     ++   + +   R   G  +      +  +AD+   + AA  L +R A +
Sbjct: 251 IAAQALGLGEGAIDRTVAFVMERKQFGRPIGAFQNTQFQLADMKTRMDAAKYLVYRAACA 310

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             E    S EAA         K +  + A  V  +A++  GG GY  E  + R  R++  
Sbjct: 311 KAEKSRFSAEAA-------EAKLFAAEAAMDVTTKAVQLHGGYGYTREYEVERMMRDAKI 363

Query: 440 NSILLGSGNAMVLDV 454
             I  G+     + +
Sbjct: 364 TEIYEGTSEVQRMVI 378


>gi|262375286|ref|ZP_06068519.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309540|gb|EEY90670.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 378

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 125/372 (33%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA    L+     G         +          + A           
Sbjct: 24  PTAALRDKTAQFPA--QELKELGELGALGMTVAEEWGGAGLDYVSLVLALEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    +     T    + +  K+ + E+                  LTE + 
Sbjct: 82  STIVSVQNSLPCGITQRYGTEEQKQQYLTKLATGEW-------------LGCFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++  + ++  D        ++  +   +   ++ A  +   G   +   L     
Sbjct: 129 GSDASSLECKAERDGDEWVLNGTKQFITTGKHAQIALVFAVTDKSAGKKGISCFLVPTDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    RL+ K+G   + T  +   N        L     G    +  L    +  A  S
Sbjct: 189 PGYIVSRLEEKMGQHCSDTATIVLDNCRIPAANLLGQEGEGYKIALSNLESGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L  A+ YA  R   G  ++    +   +AD+A  I AA  L    A   D   
Sbjct: 249 VGMARAALDAAVEYANDRKAFGVEIVQHQAVAFRLADMATQIEAARQLVLHAATLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +EA+ A       K +   +A  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 ACLKEASMA-------KLFASTIAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|114570096|ref|YP_756776.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340558|gb|ABI65838.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 378

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 128/375 (34%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ ++ P    ++R +   G                +              +  
Sbjct: 26  PNAAKWDEEKYFPV--EVMREAAELGFAGIYTRDDVGGSALSRLDAAIIFEELSRGCVPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T    + + P + + E                   LTE   G
Sbjct: 84  AAFLSIHNMCAWMIDSWGTEEQRQRFLPGMMTME-------------KIASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + ++  +  D         +   +  SD ++++ +  G  G   +  ++ +    
Sbjct: 131 SDAAQLRTKAVRDGDDYVLNGAKAFISGAGTSDYYVVMCRT-GGDGPKGISTIVVEKDTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   + K+G  +  T  + F +       LL +  +             ++    S+
Sbjct: 190 GLSFGANERKMGWNAQPTRVVTFEDCRVPAANLLAEEGMGFTLAMKGLNGGRINIGACSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G   +   A  Y   R   G  +    V +  +AD+A ++ A+  + +R A + D    
Sbjct: 250 GGATEAFELAKDYVGTRKQFGREIGQFQVTQFKLADMATELEASRMMLYRGAAAIDAGDP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +       V  +A++  GG GY+++  + R  R+   + IL G
Sbjct: 310 S------AAKYCAMAKRFATDTCFDVANQALQLHGGYGYLQDYPLERIVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   + +
Sbjct: 364 TNEIMRVIIAKDVMR 378


>gi|153000023|ref|YP_001365704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|160874644|ref|YP_001553960.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|304409611|ref|ZP_07391231.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307303969|ref|ZP_07583722.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|151364641|gb|ABS07641.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
 gi|160860166|gb|ABX48700.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|304352129|gb|EFM16527.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306912867|gb|EFN43290.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|315266886|gb|ADT93739.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 385

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 144/394 (36%), Gaps = 27/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A     +     P   +WD+    P    +++++   G        S   +
Sbjct: 7   DDQRQFADLARQFAAE--ELTPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGGM 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                   +++    +  MV    T  + + W+            
Sbjct: 63  GLSRLDASIIFEELAKGCTATTAMLTIHNMATWMVTTWGTETLRQTWSE----------- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   +   +++ 
Sbjct: 112 --PLTTGQMLASYCLTEPGAGSDAASLQTKAVRDGDE-YVISGSKMFISGAGATELLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G+ G   +  +       G+ Y + ++K+G  +  T ++ F N    +   L     
Sbjct: 169 CRTGQAGPKGISAIAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A 
Sbjct: 229 GFAFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D +         A     + K +   +   V   A++  GG GY
Sbjct: 289 ELVAARQMVRLAAFKLDSSDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  + RH+R+   + IL G+   M L +   L
Sbjct: 343 IREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|254461839|ref|ZP_05075255.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacterales bacterium
           HTCC2083]
 gi|206678428|gb|EDZ42915.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 379

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 137/396 (34%), Gaps = 27/396 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q+  R       +   + P  +  DK    P   A L +    GL   +    F    
Sbjct: 5   ETQDAIREMTRQFAEDVLW-PNADARDKSCEFP--RAELSQMGELGLMGMLVPEEFGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   + +         + + PK+ S E+    
Sbjct: 62  TGAVAYALALEEIAAGDGPVSTILSVHSSVGCVPIVRFGNDAQKQKYLPKLASGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D + + +   +  D        ++  S       I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASNLKTSAVRDGDEWVINGAKQFITSGKNGQMIIIFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
             +       +   +   +  G    R+++K+G     T +L F++        L     
Sbjct: 169 VTDKDACKRGISAFIVPTNTPGYEVVRVEDKLGLNCTDTCQLAFTDMRVPAENMLGEEGQ 228

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    +  L    +  A  +V   R +L  A  YA  R   G  + +   +   +AD+A 
Sbjct: 229 GYKIALANLEGGRIGIAAQAVGMARSALKVARDYATERTSFGTAIANHQAVGFRLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A+  + +     EA+ A       K +  ++A  V ++A++ +GG GY
Sbjct: 289 QVEAARQMVLHAASLKEASIPCLNEASMA-------KLFASEVAEKVCSDAIQTLGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +  + R YR+     I  G+ +   L +   L++
Sbjct: 342 LSDYPVERIYRDVRICQIYEGTSDIQRLVIARNLDQ 377


>gi|52421183|dbj|BAD51430.1| butyryl-CoA dehydrogenase [Butyrivibrio fibrisolvens]
 gi|291517878|emb|CBK73099.1| Acyl-CoA dehydrogenases [Butyrivibrio fibrisolvens 16/4]
          Length = 389

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 136/393 (34%), Gaps = 50/393 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+ E  P     + + +  G       + +                Y+M   E 
Sbjct: 26  PMAQEIDETEQFP--RENVEKMMKYGFMGIPIPKEYGGQGCD-------VLTYIMCVEEL 76

Query: 149 GHLM--------SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +         + +      +    T    + +   + S                    
Sbjct: 77  SKVCGTTGVIVSAHTSLCCDPILTYGTEEQKQKFLVPLASG-------------KKLGAF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GRV 253
            LTE   GTD      + ++  D  + L+G K F+++   +D +I+ A  +      GR 
Sbjct: 124 ALTEPGAGTDAQGAQCRAEEDGD-SWVLNGSKCFITNGKEADIYIIFAVTDIVEDAKGRK 182

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
                   + +    G  +   + K+G R+++T EL F +     +   N+     +   
Sbjct: 183 SKKF-SAFIVEKGTPGFTFGTKEKKMGIRASSTYELIFQDCR---IPKENILGPRGKGFG 238

Query: 314 ILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I ++ LD   + ++   + + E      I + + R   G  +         +AD+   + 
Sbjct: 239 IAMHTLDGGRIGIAAQALGIGEGSIDATIDFVKERKQFGRPIAAFQNTAFQLADMKARMD 298

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L ++ A + D+     + +    I A   K +  + A AV  +A++  GG GY  E
Sbjct: 299 AAKYLVYKAACTKDQYMEDHKTS--YSIEAAEAKLFAAEAAMAVTTKAVQLHGGYGYTRE 356

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R  R++    I  G+     L +   + K
Sbjct: 357 YDVERMMRDAKITEIYEGTSEVQRLVISGAMLK 389


>gi|313901691|ref|ZP_07835122.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
 gi|313468042|gb|EFR63525.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
          Length = 396

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 82/414 (19%), Positives = 158/414 (38%), Gaps = 33/414 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           ++L  T +E+ R A     Q     P    +D+    P     +RR    G    +   +
Sbjct: 6   FLLDPTYEEI-RAAVREFAQ-RELAPRAAAYDESGEFP--WENVRRLAEHGYLGMMIPEA 61

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +        AH I    +       A  +   +     ++       +   W P +    
Sbjct: 62  YGGGGMDTLAHAICLEEVARACAATAVVMDVHNSLVGELINRWAGEAMKARWLPVL---- 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                     +        LTE   G+D AA+ +   +  +  Y L+G K F+S+  ++D
Sbjct: 118 ---------ARAERLGAFCLTEPDAGSDAAALKTTAVRDGEH-YVLNGRKTFISNGGVAD 167

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +++ A  +   G   +   L +    GL + +   K+G R++AT ++            
Sbjct: 168 LYVVFAVTDPAAGSRGISAFLVEKGTPGLSFGKPFKKMGIRASATTDVILEQVRVPA--- 224

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
            N+     +  KI L  LD+  + +    V +A+     A+ YA +R   G  +     +
Sbjct: 225 ENLIGREGQGYKIALATLDNGRVGIGAQAVGIAQAALDRAVAYAGQRRQFGRPIGSFQGI 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  + AA  L +R A  +D++         A     + K +  ++A  V  EA
Sbjct: 285 QFKLADMATQVEAARLLVYRAAVLYDQSVHTGR---RASKEIAMAKLFASEVAMKVTTEA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468
           ++  GG GY+++  + R  R++    I  G+     + +   LL +     E L
Sbjct: 342 VQIHGGYGYLQDFEVERLMRDAKITQIYEGTSEVQRMVIARALLAEAGQAVEAL 395


>gi|126698383|ref|YP_001087280.1| putative acyl-CoA dehydrogenase [Clostridium difficile 630]
 gi|255099918|ref|ZP_05328895.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-63q42]
 gi|255305807|ref|ZP_05349979.1| putative acyl-CoA dehydrogenase [Clostridium difficile ATCC 43255]
 gi|115249820|emb|CAJ67637.1| putative acyl-CoA dehydrogenase [Clostridium difficile]
          Length = 380

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 132/377 (35%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P    L  +    G +       +         K+            +
Sbjct: 26  PIAAETDKTGIFP--RELFSKMAKIGFNGIGTPVEYSGSGGADIEKVIVVTEIAKKCAAS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S     A  +    T    K + P              M +        LTE   G
Sbjct: 84  AAILSIHTIYAQAILKFGTEEQKKKYLPM-------------MAEGGCVGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D A   +      +   Y L+G K F+S    +++ I+ A  +   G   +  ++ D  
Sbjct: 131 SDAARAATTAIIDEETDEYVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G    +++ K+G   + T EL F N        L            +  LD A + V 
Sbjct: 191 TPGFSIGKIEEKMGIHGSETAELIFDNCRVPKSNLLGKEGKGFN--IAMTCLDGARIGVG 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +AE     +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+   
Sbjct: 249 AQAVGIAEGALEESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKA 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++EAA A       KY   + A  V   A++  GG GY+++  + R YR++    
Sbjct: 309 RGEKHTKEAAMA-------KYNASRTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITE 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 362 IYEGTSEIHKVVISRAV 378


>gi|313106647|ref|ZP_07792869.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879371|gb|EFQ37965.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 384

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 132/365 (36%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++  A  L   +      L + +   +  + 
Sbjct: 39  AIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P++ S E             +     LTE   G+D A++ +   +   
Sbjct: 99  IDGTEEQKRRYLPRLASGE-------------LLSSFCLTEPDSGSDAASLKTTAMRDGG 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+ +  + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|254227625|ref|ZP_04921056.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|262395673|ref|YP_003287526.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151939667|gb|EDN58494.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|262339267|gb|ACY53061.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 384

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPHAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKAEVAQQFSADLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVRDGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GASGVSAFVVPADCEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|311067526|ref|YP_003972449.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310868043|gb|ADP31518.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 571

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 149/383 (38%), Gaps = 33/383 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLM 152
            D+ + H     L + +   GL        +  +   K+   + A ++           +
Sbjct: 54  IDQHD-HENVKKLFQAAGALGLLGIEVPEEYGGLSLNKKLSGLVAEKMGAGGSFSVSFNI 112

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              V +   V    T      + PK+ + E+                  LTE   G+D  
Sbjct: 113 HAGVGTLPYV-YYGTEEQKHKYLPKLAAGEW-------------IGAYALTEPSAGSDAL 158

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +      +G  + L+G K W  ++ ++D +++ A+    +  F+V R     S  G+
Sbjct: 159 NAKTTAVLNEEGTAWILNGEKQWITNAQVADVYVVFAKTTEGMTAFIVER-----SFEGV 213

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                + K+G + ++T  L           +LG +        ++  +  L  A  ++  
Sbjct: 214 SVGPEEKKMGIKGSSTATLILEEVSIPIENVLGKVGKGHRVALNILNMARLKLAFSNIGT 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---- 383
            + +L  A++YA++R      +I   +++  IAD+A+ I  A + ++R A S D      
Sbjct: 274 SKQALKLAVNYAKQRKQFNRPIISFSMIQEKIADMAISIYGAESAAYRTAGSLDNVFDCA 333

Query: 384 ---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                R  E A       I K  C ++   ++ EA++  GG GY++E  + R YR+   N
Sbjct: 334 DPLDDRLRELATYASECAINKVNCSEVLDRIVDEAVQIHGGYGYMQEYEVERLYRDVRIN 393

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     L +  LL K  +
Sbjct: 394 RIFEGTNEINRLTIAKLLMKKAD 416


>gi|309789696|ref|ZP_07684276.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308228182|gb|EFO81830.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 391

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 137/380 (36%), Gaps = 30/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ E  P    +++++   GL    +   +  +      + +    L       
Sbjct: 26  PIAHELDEEERVP--FEVVKKAGELGLLGVPFPEKYGGLEMGLTGYCVLMEELNRACAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +  +A  + L  T    + +   + S              ++     LTE   
Sbjct: 84  ATIIGAHTQLAAMSINLGGTAAQKEKYLKPLISG-------------AMIGAWALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGS 266
           G+D A + +  +   D         W  +   +D  ++ A  +   G    +   + +  
Sbjct: 131 GSDAAHLQTTAELHGDEWVLNGQKMWITNGSFADVIVVHAVNDRHKGARGGITAFIVEKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSV 325
             G    ++++K+G +++ T  L F +        +  + G        +  LD   + +
Sbjct: 191 TPGFRVGKVEHKMGLKASHTASLFFEDCRVPAENVIGGAHGVGHGFPLAMKTLDIGRVGL 250

Query: 326 SG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            G      + +   +  YA  RH  G  L D   ++  +A++A+ I     + +  A   
Sbjct: 251 GGSSVGGAKEAFELSRKYAVERHQFGRALADFQAIQFKLAEMAVKIYTMEQIVYDCARRV 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K  + E+        I K +C +MA  VI EA++  GG G+  E  + R YR++   
Sbjct: 311 DAGKPATLES-------SIVKLYCTEMASQVIDEAIQIYGGMGFSREVPLERMYRDARVT 363

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   L K
Sbjct: 364 RIFEGTNEIQKNVIARELLK 383


>gi|167045703|gb|ABZ10350.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine bacterium HF4000_APKG2098]
          Length = 541

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 84/409 (20%), Positives = 156/409 (38%), Gaps = 49/409 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    ++ I DG      D  +      +        +     L        S+
Sbjct: 72  VRTPPGYKEAYKKFIEDGWVSLSCDPEYGGQGMPKTISAFFDEMLSSTSLSFKLYSELSI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + + +       + K + P I              K + +  + LTE   GTD+  + +
Sbjct: 132 GAYNCILHHGADSIKKKFLPNIV-------------KGTWSGTMCLTESVCGTDLGLLKT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED- 264
           +  +  DG + LSG K F++S   D       ++LA+          +  FLVP++    
Sbjct: 179 KAVEQPDGTFKLSGQKIFITSGDHDLTENIIHLVLARTPEAPPGIKGISLFLVPKIQVKE 238

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+    +++K+G R +AT  L F    G ++G  N     +  M  L  +  
Sbjct: 239 DGSLGPRNGVSTGSIESKMGIRGSATCVLNFDGAVGHIIGPKNKGLSSMFTMMNLERIVV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAA 369
            I  +    ++   A++Y++ R   G            ++ID   ++R++ ++   I   
Sbjct: 299 GIQGLGLSEIAYQNALNYSKERKQ-GKSNSSKTKNGADLIIDHADIRRSLLNMKSIIEGE 357

Query: 370 TALSFRLAN------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ALSF LA          + K + E      +M P+ K     M   + ++AM+  GG G
Sbjct: 358 RALSFWLAQQTEVSLHHKDNKIKEEALDLVSLMTPVVKSLFTDMGMEITSDAMQIFGGYG 417

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFS 470
           Y +++ I + YR++    I  G+ +     L    L  K  N+  +   
Sbjct: 418 YTKDQGIEQLYRDNRITPIYEGTNSIQSIDLVFRKLFNKDRNIIGRYIK 466


>gi|226307441|ref|YP_002767401.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226186558|dbj|BAH34662.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 386

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 146/398 (36%), Gaps = 36/398 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  TA++ A              P    WD+ +  P    +LR++   G+       
Sbjct: 8   ERAIRDTARDFAAE---------HLAPNAVEWDQTKHFPV--DVLRKAASLGMGGIYIRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +    R               +S       M+           W P + S +
Sbjct: 57  DVGGSELSRVDAARIFEELAKGDPSIAAYISIHNMVTWMIDQFGNDEQRHKWVPGLCSMD 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A ++++  +  D  Y L+G K F+S    SD
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F +        
Sbjct: 163 VYVVMART-GSAGAKGISAFIVPKDSPGLSFGANEVKMGWNAQPTRQVIFEDVRVPAANM 221

Query: 302 LNV-STGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L    +G    MK      L+ A  SV G + +L +A+ Y   R   G  LI+   ++  
Sbjct: 222 LGEEGSGFRIAMKGLNGGRLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQ 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  L +R A + ++       A+    +  + K +       V  +A++ 
Sbjct: 282 LADMRTELEAARTLLWRAAAALEDG------ASDVVELCAMAKRFATDTGFDVANKALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GY+ E  I +  R+   + IL GS   M + +  
Sbjct: 336 HGGYGYLAEYGIEKIVRDLRVHQILEGSNEIMRVVIAR 373


>gi|330808605|ref|YP_004353067.1| isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376713|gb|AEA68063.1| Putative isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 387

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   + R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDIDNLFPA--DMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGNHEQKTKYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDKYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGALNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + +  +
Sbjct: 256 TGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACERGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|126740367|ref|ZP_01756055.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126718503|gb|EBA15217.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 386

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 144/399 (36%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P  +  D+    PA   L R     GL        F
Sbjct: 7   TFDLGEDVNALRDMIHRWAQDRVKPLAQEVDQTNEFPA--DLWREMGELGLLGITVPEEF 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L  +    + + P + S E+
Sbjct: 65  GGAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNASEEQKRKFLPGLISGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDHYRLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   + +    G       +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPEAGSKGITAFIVEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A +    M   + E + Y + R   G  + +  +M+  IA
Sbjct: 232 EEGRGVRVLMSGLDYERVVLAGIGTGIMAACMDEMMPYLKERKQFGQPIGNFQLMQAKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + +A A  + +A + D+     ++AA           +  ++A     +A++  G
Sbjct: 292 DMYTAMNSARAYVYEVAKACDKGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 345 GAGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|126666970|ref|ZP_01737946.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
 gi|126628686|gb|EAZ99307.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
          Length = 599

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 81/431 (18%), Positives = 153/431 (35%), Gaps = 50/431 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    QE A+ A      L+      G  W +  V+    +     + +  G      
Sbjct: 37  DMIDAIIQEGAKFAEQVLSPLNQSGDREGCTWSESGVKTPAGFKEAYSKFVEGGWPSLAA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D S        +  I  + +   A    G     S  + + +    T    + +  K+ S
Sbjct: 97  DPSHGGQGLPSSLGIVMSEMNGTANWSWGMYPGLSHGAINTLEEHGTEEQKQTYLTKMIS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + ++ +   DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEAHCGSDLGTLRTKAEPNMDGSYSITGTKIFISAGEH 203

Query: 241 D-----AFIMLAQVEGRV-GCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++ G   G   +   +            G  N L    +++K+G  +N
Sbjct: 204 DLTDNIVHIVLARLPGAPEGTKGISLFVVPKCLPAQDGSAGERNALSCGSIEHKMGIHAN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +     +  + +AI  +    + L  ++ YA+ R  
Sbjct: 264 ATCLMNFDGAKGWLIGAENKGLNAMFTFMNVARIGTAIQGLGAAELGLQGSVAYAKDRLA 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +         A AL +  A   D        + R
Sbjct: 324 MRALSGAKNPDSYADPIIVHPDVRRMLLTQKAIAEGARALIYMTAQKADIVQSGKTEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  ++     +  M+  GG GY+ E  + ++ R++    I  G+
Sbjct: 384 KAADELLGFLTPIAKAFLTEIGYESASLGMQVFGGHGYVSEWGMEQNVRDARIGMIYEGT 443

Query: 447 GNAMVLDVLNL 457
                LD+L  
Sbjct: 444 TGIQALDLLGR 454


>gi|46128265|ref|XP_388686.1| hypothetical protein FG08510.1 [Gibberella zeae PH-1]
          Length = 426

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 138/375 (36%), Gaps = 27/375 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             + DK    PA   + ++    G      D     +    QAH I    L   +     
Sbjct: 69  AAKTDKTNAFPA--EMWQKLGEAGFLGITADEDVGGLAMGYQAHIIVMEELSRASGSIGL 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + + L  +P   + + P + +              +    L ++E   G+
Sbjct: 127 SYAAHSQLCVNQLQLNGSPEQKQKYLPGLIAG-------------TSVGALAMSESGAGS 173

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  + +  G        W  + P +D  ++ A+ E       +   + D    G
Sbjct: 174 DVVSMRTTAKAVDGGYVLNGSKMWITNGPDADFIVVYAKTEPEKNSKGITAFIVDTKTEG 233

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F   F     +LG +N     + +   L  L  +   + 
Sbjct: 234 FSCARKLDKMGMRGSNTGELMFDGVFVPTENILGKVNGGVRVLMEGLDLERLVLSAGPLG 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKS 385
            M+ +L   + +  +R   G  +    +++  +AD+   + A+   ++  A + DE    
Sbjct: 294 IMQAALDVTLPFTHQRKQFGQPIAHNQLLQGKLADMYTKLQASRCYTYATAKAVDENGLI 353

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R+++ A A         +  + A     + ++ +GG GY+EE   +R  R++    I  G
Sbjct: 354 RTQDCAGA-------ILYAAERATECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAG 406

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +     K
Sbjct: 407 TSEIRRMVIGRAFNK 421


>gi|91224762|ref|ZP_01260022.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91190308|gb|EAS76577.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 384

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPHAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKAEVAQQFSADLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVRDGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADCEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|15597211|ref|NP_250705.1| isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218892027|ref|YP_002440894.1| putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa
           LESB58]
 gi|254235097|ref|ZP_04928420.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa C3719]
 gi|254240451|ref|ZP_04933773.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa 2192]
 gi|9948019|gb|AAG05403.1|AE004628_1 putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126167028|gb|EAZ52539.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa C3719]
 gi|126193829|gb|EAZ57892.1| Citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa 2192]
 gi|218772253|emb|CAW28035.1| putative isovaleryl-CoA dehydrogenase [Pseudomonas aeruginosa
           LESB58]
          Length = 387

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 137/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    + R+    GL     D  +        AH +    +   +   
Sbjct: 31  PRAAQIDQDNQFPM--DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + P + S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++ D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 VGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAYLYAVAAACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPTGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|42523450|ref|NP_968830.1| butyryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39575656|emb|CAE79823.1| butyryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 388

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 129/346 (37%), Gaps = 22/346 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMA-QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
           +++     +   +      +  ++    +E    +  SV+    V    T      W   
Sbjct: 54  LFEMGLMGIETPEKWGGAGSTFFMACLAVEEIGRVDGSVSVLVDVQNTLTTNAFLKW--- 110

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
               E   +       +       L+E   G+D  A+  + +   D         W  + 
Sbjct: 111 --GTEAQKSKYLGQMASKDVGAYALSESSSGSDAFALKLKAEDKGDKWVLNGSKLWITNG 168

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             ++ FI+ A +    G   +   + +    G    + ++K+G R+++T EL F N    
Sbjct: 169 NEANIFIVFANMAPEKGYKGITAFIVERGFKGFSVGKKEDKLGIRASSTCELLFENCEVP 228

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
                NV     +  KI I  L+   + +    + +A+     A+ Y + R   G  +  
Sbjct: 229 ---KENVLGEVGKGYKIAIETLNEGRIGIGAQMIGIAQGAYEAALGYVKGREQFGKPIAH 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +A++  ++ AA  + +  A   D      E AA A       K +  + A  +
Sbjct: 286 FQGVQFQLAEMRTELEAARLMVYNAARLKDAGLDFIEAAAMA-------KLYSSRAAEKI 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            ++A++  GG+G+ +E  + + +R++    I  G+ N  +  +  +
Sbjct: 339 TSKAIDLFGGNGFTKEYPVEKFWRDAKIGQIYEGTTNMQLQTIAKM 384


>gi|299769523|ref|YP_003731549.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298699611|gb|ADI90176.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 378

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 127/366 (34%), Gaps = 26/366 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    PA   L       G         +          + A             ++S 
Sbjct: 30  DKTHEFPA-QELKDLGA-LGAMGMTVPNEWGGAGMDYVSLVLAIEEIAAGDGAISTIVSV 87

Query: 155 SVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +    + L   + +  + + PK  S E+                  LTE   G+D +A
Sbjct: 88  QNSLVCGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHVGSDASA 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           I  + ++  D        ++  S   +   ++ A  + + G   +   L   +  G    
Sbjct: 135 ILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNTQGYLVT 194

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRV 330
           R+++K+G  ++ T  +   N    L   +     G    +  L    +  A  SV   R 
Sbjct: 195 RIEDKMGQHASDTATITLENCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQSVGMARA 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D      +EA
Sbjct: 255 AFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGLPCLKEA 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  G+ +  
Sbjct: 315 SMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQ 367

Query: 451 VLDVLN 456
            L +  
Sbjct: 368 RLVIAR 373


>gi|294140852|ref|YP_003556830.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293327321|dbj|BAJ02052.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 585

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 91/472 (19%), Positives = 177/472 (37%), Gaps = 53/472 (11%)

Query: 34  MNAYSSDSL----LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYG 88
           MN Y +       L+  + + P      L  + E V   TA  +   A+  + +L H   
Sbjct: 1   MNPYQAPLAEMKFLLDKVFDAPQTW-ASLPAIAENVDMDTAMAIMDEADKISRELLHPIN 59

Query: 89  PGGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             G+        DKV     +     +    G      +     +   +   +    +  
Sbjct: 60  RSGDEQGVLHQGDKVITPDGYKEAYSQFAEGGWVGLCGEPELGGMGMPKMLGVLVDEMAY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        S +  +A  +    +  + + + P ++S E+             +  + +
Sbjct: 120 SACNAFTLYGSLTAGAALCINAHGSHELKQKYLPMMYSGEW-------------SGAMDM 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--C 255
           TE + G+D+  I ++   + DG Y ++G K F++    D       ++LA++    G   
Sbjct: 167 TEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISL 226

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP++  D     G  N +    +++K+G +++AT  + +    G+L+G+ N     + 
Sbjct: 227 FLVPKIKVDDSGALGESNKVTVGSIEHKMGLKASATCVMNYDEAQGYLIGEPNRGLVCMF 286

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--------ILIDQPVMKRAI 359
            M     L   I  +   + +   A  YA+ R      GG         +I    ++R +
Sbjct: 287 TMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHGDVRRML 346

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +I +   A  ALS       D     E +++++ + Y  ++ P+ K +           
Sbjct: 347 LNIRVLTEAGRALSVLTGQQLDIAKYGEGEAKAKASRYVGLLTPVAKAFLSDRGLDAAIM 406

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           A +  GG GYI E  I +  R++    I  G+     +D L     G NL  
Sbjct: 407 AQQVFGGHGYIRETGIVQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAA 458


>gi|16082014|ref|NP_394434.1| acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
 gi|10640289|emb|CAC12103.1| probable acyl-CoA dehydrogenase [Thermoplasma acidophilum]
          Length = 384

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 157/382 (41%), Gaps = 29/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P    ++ R    GL  +   + +          +RA      A    
Sbjct: 27  PLAKEIDEKMEVP--RKIIDRMKDLGLFATYIPKEYGGYGMSFPFLVRAIEEISKACPST 84

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++  ++T  A  + +  +  + K + P++ +                  GL +TE   
Sbjct: 85  ALVLDGALTLFAEPLIMFGSEDLKKRYLPRVAAG--------------SVGGLAITEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A I++   K  D  Y ++G K F+S+  +SD F++ A  +       +   + D  
Sbjct: 131 GSDAAGISATAVKKGD-RYVINGDKIFISNGRISDFFVLDAVTDPGKRHRGITAFVADRD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL   R  +K+G R ++TVEL F +       ++G  N     + +      +  A  
Sbjct: 190 TPGLKISRDIHKMGIRGSSTVELAFEDMEIPAENIVGKENEGFKVIMETLDAGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++     +LAEAI Y ++R   G  + +   ++  IA++A +I AA  L++  A  +   
Sbjct: 250 ALGIAENALAEAIDYVKQRKQFGTEIANFEGIQFMIAEMATEIEAARYLTYVAAEKWQNK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  E +A A++ A         +A  V  +A++  GG GY  +    RH R++    I 
Sbjct: 310 ENTIEISAMAKMKA-------SDVAMRVTTDALQLFGGYGYTTDLDAERHMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEKGTNLF 465
            G+     L +   + K T  +
Sbjct: 363 EGTNQIQRLVIAKEILKKTRYY 384


>gi|325271496|ref|ZP_08138014.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103386|gb|EGC00715.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 592

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 94/542 (17%), Positives = 188/542 (34%), Gaps = 64/542 (11%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E  +  A    P        G  WD   V     +          G      D  F
Sbjct: 42  AVLEEAGKVTAKTIAPLSRTADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLF 101

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +   +A   +   +   + L  G     +  +   +    +  + + + P +++  + 
Sbjct: 102 GGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVW- 160

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
                       A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D   
Sbjct: 161 ------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTE 208

Query: 242 --AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ + +     G+ N      +++K+G +++AT  
Sbjct: 209 NIIHLVLAKLPDAPAGPKGISLFLVPKFMVNEDGSLGARNPATCGSIEHKMGIQASATCV 268

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + F    G+++G+ N     +  M     L   I  ++    S   A+ YAR R  S   
Sbjct: 269 MNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLATAERSYQNAVEYARDRLQSRAP 328

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEA 390
                       +I  P ++R +  +   I    A S  +A   D AK       R    
Sbjct: 329 TGPQAKDKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDPGVRKRSE 388

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ P+ K +   +         +  GG GYI E    +  R+     I  G+    
Sbjct: 389 ELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQ 448

Query: 451 VLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            LD++   ++  G   +      + Q + S+G ++    R   +   +  GL  ++ ++ 
Sbjct: 449 ALDLMGRKVVASGGAYYTLFSDEIRQFMASAGSELDEFTRPLGAALGQLDGLTEWVLQQA 508

Query: 509 AL----ASSAAALYRAGMNDIADVFLENRF--------LDNCHSTHCMLHGRFNAAHIID 556
                   +A+  Y      +A  ++             D    +  +   RF  A ++ 
Sbjct: 509 KGNPNEIGAASVEYLHAFGYVAYGYMWALMARAAKAGEGDEAFYSGKLGTARFYFARLLP 568

Query: 557 SL 558
            +
Sbjct: 569 RV 570


>gi|188590910|ref|YP_001795510.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937804|emb|CAP62788.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 376

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 140/394 (35%), Gaps = 31/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     Q     P   +WD+ +  P    + R     G +       +      
Sbjct: 7   QEMIRDAVRQFAQ-EVIAPQAAQWDRDKTFP--KDVHRELAALGAYGVAVPEQYGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+    +    + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMLMSFASEAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AA+ +   +  D        ++  S   +D  I+LA  
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTSAVRDGDHYVLNGVKQFITSGQNADVAIVLAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   +   S  G    RL++K+G  S+ T ++ F +        L    G  
Sbjct: 171 DKAAGKRGISAFIVPTSTPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLGDEGGGY 230

Query: 310 EDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +    L  L+   + ++   + +       A+ YA+ R   G  L     ++  +A++A 
Sbjct: 231 K--MALSGLEGGRIGIASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQFRLAEMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  + +  A   D  +   +EAA A       K +  +MA  V ++A++  GG GY
Sbjct: 289 RIDVARQMVWHAAALRDAGRQCLKEAAMA-------KLFASEMAERVCSDAIQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|89269093|emb|CAJ81939.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus
           (Silurana) tropicalis]
          Length = 429

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 129/354 (36%), Gaps = 27/354 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL     D  +            A+    +  +E    + PSV+    +       +
Sbjct: 95  FELGLMGVEVDPKYGGTG--------ASFFSSILVIEELARVDPSVSVMCDIQNTLINTL 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +         E       P           L+E   G+D  ++ +  QK  D       
Sbjct: 147 FQR-----LGTEQQKETYLPRLCRDTVGSFCLSEAESGSDAFSLRTSAQKHKDYYIINGS 201

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +S  +  F+++A      G   +   +      G    + ++K+G R+++T  L 
Sbjct: 202 KMWISNSEQAGVFLVMANANPSAGYKGITCFIVPKDTEGFHIGKKEDKLGLRASSTCSLT 261

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVS 345
           F N        L       +    +  L+   + +S   + LA+        Y ++R   
Sbjct: 262 FDNVKVPESNILGQLGHGYKYAIGM--LNEGRIGISAQMLGLAQGCFDHTIPYTKQRVQF 319

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D   M+  I+ +A  + A   L++  A   +  +   +EA  A       KY+  
Sbjct: 320 GKRIFDFQGMQHQISHVATQLEATRLLTYNAARLKEAGRDFKKEACMA-------KYFSS 372

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           ++A    ++ +E +GG GY ++  I ++YR++   +I  G+ N  +  +  L+E
Sbjct: 373 EVACLTTSKCIEWMGGVGYTKDYPIEKYYRDAKIGTIYEGTSNIQLSTIAKLIE 426


>gi|239834346|ref|ZP_04682674.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239822409|gb|EEQ93978.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 656

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 111/590 (18%), Positives = 196/590 (33%), Gaps = 80/590 (13%)

Query: 2   TLREIYRRLAMNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60
           T + +  R++M     P  D+ F LN    +   N       L       P VV   L  
Sbjct: 50  TAQVVNWRISMPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFADASPDVVEAILSE 103

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK---VEFHPAWHALLRRSIHDGLHC 117
            G  +   T            P  H     G +      V     +          G   
Sbjct: 104 -GAKLAEGTLF----------PVNHTADREGCKRSSDGSVTTPKGFKEAYDLYREGGWLG 152

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                 +        + +  A    M+       M P +T  ++ A+    T      + 
Sbjct: 153 LAVPEQYGGQGLP--YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYL 210

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+    +  T             + LTE   GTD+  + +      DG Y +SG K F+
Sbjct: 211 PKMVEGTWTGT-------------MNLTEPHCGTDLGLLRTSATPQEDGSYKISGQKIFI 257

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA+++G       +  F+VP+ + D     G  NG+    ++ K+
Sbjct: 258 SAGEHDMSENIIHLVLARIDGAPEGVKGISLFIVPKFILDENGNPGERNGVSCGSIEEKM 317

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +    G+L+G+ +     +  M     L  A+  +S    +   A+ YA
Sbjct: 318 GIHGNATCVMNYDEAKGYLIGEAHKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYA 377

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           R R                  +I  P ++R + +I     A  AL    A + D A    
Sbjct: 378 RERIQGRALSGAAAPDKKADPIIVHPDIRRNLMNIRAFNEAGRALILWTALNSDIAHRSG 437

Query: 388 EEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +EA          ++ P+ K             A +  GG GYIEE  ++++ R++    
Sbjct: 438 DEAERQTADDLVGLLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEHGMSQYVRDARIAM 497

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKED 497
           I  G+     LD++   L   G       F  + +  +     +K+    +       + 
Sbjct: 498 IYEGANGIQALDLVGRKLALNGGRAVTAFFKEVGEFCEANRENEKLSFFTKHLKKGLNDL 557

Query: 498 KGLARFLTEKIAL----ASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
           +    +L +        A +A+  Y      +A  F+  R          
Sbjct: 558 QAATMWLMQNAMAKPDNAGAASNDYMHLFGLVALGFMWARMARIAEEKLG 607


>gi|33603779|ref|NP_891339.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577904|emb|CAE35169.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 600

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 135/569 (23%), Positives = 222/569 (39%), Gaps = 49/569 (8%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71
           +P  +  A + P    G N +  D  L  L+A               + LGE   + T  
Sbjct: 12  RPRTADAAESIPNDCRGQNFWRLDPSLRQLLALCADTEELRHFTPHFDRLGELAGN-TLD 70

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRK 130
           ELA  A+ + P L      G   D++++HPA+  + R +  + G+               
Sbjct: 71  ELADAADKHPPTLAPRDRHGRDVDRIDYHPAYREMERIAFSEFGMAAIGHKPGVLGWPGH 130

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNK 188
            +  ++    YL +Q E G L   +   A+  M+       + +                
Sbjct: 131 ASPLVKYTLTYLFSQAEFGLLCPVNGNDAAVGMIQRYADDTLKQR----------MTGML 180

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           +   +T + IG  +TE+ GG+D+A I +  +      + + G KWF S+  +D  ++LA+
Sbjct: 181 SQDMRTLLKIGHFMTERTGGSDLAGIGTHARFDG-SAWKIYGEKWFCSAIDADYVLVLAR 239

Query: 249 VEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            EG       +G F+VPRLLEDG+ N     RLKNK+G RS AT E+ F       +G  
Sbjct: 240 PEGAPAGTRGLGMFVVPRLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQG 299

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                          L   + +   MR  L E++H+ARRR   G  +I  P+MKR++  I
Sbjct: 300 RDGIRYAVLPINASRLSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKI 359

Query: 363 ALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            +    A +    +A++          +    R+   + K+  C+    V   AME  GG
Sbjct: 360 MVPTEQALSACMFVASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGG 419

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG- 480
           SGYIEE   AR  R++    +  G+ N   LD++          E L   L +    +  
Sbjct: 420 SGYIEEWINARLVRDAQTGLLWEGTSNINALDIVTRAVARDAAHEALRQRLMELARDARV 479

Query: 481 -KKVITILRDSISLC----------KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             +    L  ++              + + LAR  + ++    +A  L   G        
Sbjct: 480 PPRHGAALTQAVEEAVARIAAIAADPQLEHLARSASSRLYHVMTAVLLAHEG------AM 533

Query: 530 LENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           L  R  D       +L       H I+  
Sbjct: 534 LAARTGDARR----LLLSWMVLMHRIEHA 558


>gi|327190845|gb|EGE57910.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 381

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 148/402 (36%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE          AR A  +   L          D+    P    L  R    GLH    
Sbjct: 6   LGETA-DAIRDTTARFAADHIAPL------AAEIDESNTFP--RQLWPRMGALGLHGITV 56

Query: 121 DRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + +    +P   + + PK+ 
Sbjct: 57  EEEFGGAGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWASPEQKRRYLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++  + ++  D         W  ++P 
Sbjct: 117 SGEH-------------VGSLAMSEAGAGSDVVSMRLRAERKGDRYILNGTKFWITNAPH 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ +  VG   +  L+ +    G    +  +K+G R + T EL F +      
Sbjct: 164 ADVLVVYAKTDPAVGAKGISALIIEKGMPGFSVSKKLSKLGMRGSDTAELVFEDCEVPAE 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +      V+ +   +  + A+++   +  M+  L   + Y R R   G  + D  +M+
Sbjct: 224 ALMGREGEGVKILMSGLDYERAVLAAGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + +A A  + +A + D  ++        R  A     +  + A  V  EA+
Sbjct: 284 AKIADMYVALNSARAYVYSVARACDAGRAT-------RTDAAAAILFASENAVKVSLEAI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY ++  + R  R++    I  G+       +   L
Sbjct: 337 QALGGAGYTKDWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 378


>gi|313496736|gb|ADR58102.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 592

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 96/543 (17%), Positives = 194/543 (35%), Gaps = 66/543 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E  +  A    P   A    G  WD   V     +          G      D  F
Sbjct: 42  AVLEEAGKVTARTIAPLSRAADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLF 101

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +   +A   +   +   + L  G     +  +   +    +  + + + P +++  + 
Sbjct: 102 GGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVW- 160

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
                       A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D   
Sbjct: 161 ------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTE 208

Query: 242 --AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ L +     G+ N      +++K+G +++AT  
Sbjct: 209 NIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCV 268

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + F    G+++G+ N     +  M     L   I  ++    S   A+ YAR R  S   
Sbjct: 269 MNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAP 328

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA----- 391
                       +I  P ++R +  +   I    A S  +A   D AK  SE+A+     
Sbjct: 329 TGPQAKDKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYVAMQLDSAK-YSEDASVRKRS 387

Query: 392 --YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ P+ K +   +         +  GG GYI E    +  R+     I  G+   
Sbjct: 388 EELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGI 447

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             LD++   ++  G   ++     + Q +  +G ++    +   +   +  GL  ++ ++
Sbjct: 448 QALDLMGRKVVASGGAYYKLFSDEIRQFINRAGSELDEFTKPLGASLDQLDGLTEWVLQQ 507

Query: 508 IAL----ASSAAALYRAGMNDIADVFL--------ENRFLDNCHSTHCMLHGRFNAAHII 555
                    +A+  Y      +A  ++        +    D    +  +   RF  A ++
Sbjct: 508 AKGNPNEIGAASVEYLHAFGYVAYGYMWALMARAAQAGEGDAPFYSGKLGTARFYFARLL 567

Query: 556 DSL 558
             +
Sbjct: 568 PRV 570


>gi|89902597|ref|YP_525068.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347334|gb|ABD71537.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 376

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 145/395 (36%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A     Q   + P   +WDK    P       +  H GL          P  
Sbjct: 5   QDQEMIRDAVRAFAQAELW-PNAAQWDKEHTFP-------KEAHQGLAALGAYGICVPEE 56

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPT 186
              A+       YL   L    + +    +++ +++   P   +   +      R++   
Sbjct: 57  LGGANMD-----YLTVALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNTAQKRQW--- 108

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+ +  +     LTE   G+D + + +   +  D        ++  S    D  I++
Sbjct: 109 -LTPLAQGQLLGAFCLTEPHVGSDASGLRTTATREGDAYVINGVKQFITSGQNGDVAIVI 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A  +   G   +   +   +  G    RL++K+G  S+ T ++ F N       L+G   
Sbjct: 168 AVTDKGAGKKGMSAFIVPTNAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIGLEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  SV   R +   A+ YA+ R   G  + +   +   +A+ A
Sbjct: 228 EGYKIALGALEGGRIGIAAQSVGMARSAFEVALAYAKERQSFGTAIFNHQAVGFRLAECA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +  A   D  +   +EAA A       K +  +MA  V + A++ +GG G
Sbjct: 288 TQIEAARQLIWHAAALRDAGRPCLKEAAMA-------KLFASEMAEQVCSAAIQTLGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YVSDFPVERIYRDVRVCQIYEGTSDVQKIIIQRAL 375


>gi|307941476|ref|ZP_07656831.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307775084|gb|EFO34290.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 598

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 114/574 (19%), Positives = 200/574 (34%), Gaps = 92/574 (16%)

Query: 34  MNAYSSDSL--LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPG 90
            NA   D+L  L  ++          LE     ++    +E A+ A     P   +    
Sbjct: 4   YNAPVEDTLFLLKDVLGFETLTALPGLEEATPDLVEAILREGAKFAEEVLQPLNQSADQE 63

Query: 91  G---ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G      D V     +          G      D  F        H I       ++   
Sbjct: 64  GCTRHDDDSVTTPKGYKEAYAAYSEAGWGTVSADPEFGGQGMP--HTIATLLNEYLSSAN 121

Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               M P +T+ ++ AL    +    + + P + S  +  T             + LTE 
Sbjct: 122 MAFSMYPGLTAGAIAALTQHGSQEQKEKYLPNMISGTWTGT-------------MNLTEP 168

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
             GTD+  I ++     DG Y +SG K F+S+   D       ++LA++EG       + 
Sbjct: 169 HCGTDLGLIRTKAIPNGDGSYKISGTKIFISAGDHDLSENIIHLVLARIEGAPQGTKGIS 228

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP+         G+ NG+    +++K+G  SNAT  + +    G+L+G+ N     +
Sbjct: 229 LFVVPKFAVADDGSVGASNGVSCGSIEHKMGIHSNATCVMNYDEATGWLVGEENKGLRAM 288

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M     L  A+  +S   V+   A+ YA+ R                  +I  P ++R
Sbjct: 289 FTMMNEARLGVAVQGLSQSEVAYQNAVAYAKDRLQGRSLSGPKSPDKAADPIIVHPDVRR 348

Query: 358 AIADIALDIAAATALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +  I     AA AL    A      +  ++ K+R        +M P+ K     +  A 
Sbjct: 349 TLMSIRSFNEAARALVLWTAMHGDISHHAEDEKTRQAADDVMGLMTPVLKGVLTDIGFAN 408

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
              A +  GG GYI+E  + +  R++    I  G+     LD++                
Sbjct: 409 TVNAQQMFGGHGYIQEWGMEQFVRDARIAMIYEGANGIQALDLVG-------------RK 455

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV--- 528
           L  + G +       + D +    E++ LA F               + G++D+      
Sbjct: 456 LPANGGRAVMSFFKEVGDFLKDNNENEALAPFTAP-----------LKKGLDDLQAATMW 504

Query: 529 FLENRFL--DNCHSTHCMLHGRFNAAHIIDSLYL 560
           F+ N     DN         G  +  H+   + +
Sbjct: 505 FMNNAMTKPDNAG------AGSTDYMHLFGLVGM 532


>gi|209518224|ref|ZP_03267051.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209501339|gb|EEA01368.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 376

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 137/379 (36%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P   +WD+    P    + R+    G +  +   ++                    
Sbjct: 20  EAITPYAAQWDRERTFP--RDVHRQLAELGAYGVLVPEAYGGAGMDALALALILEEIAAG 77

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +S +      + L        +DW               P+ +  +     LT
Sbjct: 78  DGGTSTAISVNNCPVCSILLTYGNDAQKRDWL-------------TPLARGEMLGAFCLT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL 262
           E + G+D +A+ +   +  D  Y L+G K F++S  + D  I++A  +   G   +   +
Sbjct: 125 EPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGDVAIVMAVTDKAAGKRGISAFI 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
              +  G    R+++K+G  S+ T ++ F         L+G                 + 
Sbjct: 184 VPTATPGYVVARVEDKLGQHSSDTAQIVFEACRVPAANLIGAEGDGYRIALSGLEGGRIG 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  SV   R +   A+ YA+ R   G  L     ++  +A++A  + AA  L +  A+ 
Sbjct: 244 IAAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQFRLAEMATQLEAARQLIWHAASL 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D       EAA A       K +  + A  + + A++  GG GY+ +  + R YR+   
Sbjct: 304 KDAGLPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRV 356

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+ +   + +   L
Sbjct: 357 CQIYEGTSDIQKILIARAL 375


>gi|224825725|ref|ZP_03698829.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601949|gb|EEG08128.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 594

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 92/518 (17%), Positives = 183/518 (35%), Gaps = 59/518 (11%)

Query: 70  AQELARMANYNTPQL-HAYGPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            +  A+        L       G  +D     V     +     +    G      D ++
Sbjct: 43  LEAAAQFCENELAPLNRPGDEEGCHFDAATHNVTTPAGFKEAYAQYCELGFPALDCDPAY 102

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                 ++       +   A +        S  + S +    +      + PK+ S E+ 
Sbjct: 103 GGQGMPKSLAFPVMEMQCSANVAWSMYPGLSHGAYSAIHAHGSEEQKATYLPKLVSGEWT 162

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE   GTD+  + S+ +   DG Y ++G K F+S+   D   
Sbjct: 163 GT-------------MCLTEPHCGTDLGLLKSKAEPNGDGSYSITGTKIFISAGEHDMSA 209

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               ++LA++         +  F+VP+  +DGS N +    L++K+G ++NAT  +    
Sbjct: 210 NIIHLVLARLPDAPKDVKGISLFIVPKFHDDGSRNSVYCGALEHKMGIKANATAVINLDG 269

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------ 347
             G+L+G+ N     +  M     L   +  +     S   A+ YA+ R           
Sbjct: 270 AKGWLIGEPNKGLSCMFTMMNAARLGCGMQGLGIGEASFQGALAYAKERLQMRALNGVHS 329

Query: 348 ------ILIDQPVMKRAIADIALDIAAAT------ALSFRLANSFDEAKSRSEEAAYARI 395
                  +I  P ++R +        A        AL   +     ++ +R + A    +
Sbjct: 330 PDKPADPIIVHPDVRRMLLTQKAYTEAGRALTTLLALQLDIEEKHPDSAARQDAADLVAL 389

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + P+ K +            M+  GG G+I E  + +  R+   + I  G+     +D+L
Sbjct: 390 LTPVAKAFMTDNGYTAANMGMQVFGGHGFIREWGMEQLVRDCRISQIYEGTNGIQAIDLL 449

Query: 456 N---LLEKGTNL---FEQLFSTLEQDLGSSGKKV----ITILRDSISLCKEDKGLARFLT 505
               LL++G  L    +Q+    + + G+         ++ L   +       G+A F  
Sbjct: 450 GRKVLLDQGQKLRKFTKQIHKFCQTNEGNDKLAEFVGPLSKLLKEVGDITMAVGMAAFKD 509

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
           +  A A++   L   G   +   ++  R  +  ++   
Sbjct: 510 KDEAGAAATDYLRLIGH--LTYAWMWARMAEVAYAKLG 545


>gi|15807352|ref|NP_296082.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460177|gb|AAF11909.1|AE002067_1 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 612

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 96/451 (21%), Positives = 171/451 (37%), Gaps = 55/451 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---VEFHPAWHALLRRSIHDGLHCSI 119
            +LS    E AR        L+      G + D+   V     + A  ++    G     
Sbjct: 40  DLLSQVLDEAARFVETEIQPLNQVGDQEGCKRDEQGNVTTPAGFKAAYKKFCDAGWTALD 99

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPK 177
            D  +        H +  A   ++        M P ++  +  AL    +  + K + P 
Sbjct: 100 ADPEYGGQGMP--HTVSIAMNEMICSANVAWGMYPGLSHGAYAALHAVGSDELKKLYLPH 157

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           I    +  T             +GLTE   GTD+  I ++     DG Y ++G K F+S+
Sbjct: 158 IVDGSWTGT-------------MGLTEPHAGTDLGIIRTKASDNGDGTYSVTGTKIFISA 204

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++EG       +  FLVP+ + +     G  NG+    L++K+G 
Sbjct: 205 GEHDMSENIVHLVLARLEGSPKGTKGISLFLVPKFIPNADGSLGERNGVVCGSLEHKMGI 264

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  L F    G+L+G++N     +  M     L + +  +    V+   A+ YA+ 
Sbjct: 265 HGNATAVLNFDGAKGWLVGEVNKGMNHMFIMMNAARLGTGMQGLGLGEVAYQNALAYAKD 324

Query: 342 RHVSGG----------ILIDQPVMKRAIADIALDIAAAT------ALSFRLANSFDEAKS 385
           R                ++  P ++R +        A        AL+  + +   +   
Sbjct: 325 RIQMRHEPRVSSEEADPILVHPDVRRMLLTGKAYSEAGRALALWLALNLDIESHHADEAQ 384

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R E      ++ PI K +       V  ++ +  GG GYI+E  + +  R++    I  G
Sbjct: 385 RKEAGDMVALLTPIAKAFMTDNGFNVAVQSQQVFGGHGYIQEWGMEQFVRDARIGQIYEG 444

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
           +     LD+L   +L  G    ++L  TL+ 
Sbjct: 445 TNGIQALDLLGRKVLMDGGKKLQKLAGTLQA 475


>gi|197105867|ref|YP_002131244.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479287|gb|ACG78815.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 382

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 145/399 (36%), Gaps = 28/399 (7%)

Query: 69  TAQELARMANYNTPQL--HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              E A M    T +       P     D+    P    L  +    GLH    +  F  
Sbjct: 6   QLGESADMIRETTARFASDRIAPLAAEIDQTNEFP--RQLWPQMGELGLHGITVEEEFGG 63

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           +      H +    +   +        + S    + +    +    + + PK+ S E+  
Sbjct: 64  LGLGYLEHVVAMEEVSRASASIGLSYGAHSNLCVNQLRRWGSDDQKRRYLPKLISGEH-- 121

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K  D         W  ++P +D  I+
Sbjct: 122 -----------VGSLAMSEAGSGSDVVSMRLKAEKKGDRYVLNGTKFWITNAPHADTLIV 170

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    G    +  +K+G R + T EL F +        +   
Sbjct: 171 YAKTDPDAASRGITAFIIEKEFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPL 230

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V  +   +  + A++S   +  M+  +   + Y R R   G  +    +M+  IAD+
Sbjct: 231 NGGVGVLMSGLDYERAVLSAGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADM 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + +A A  + +A + D   +   +AA A +MA        + A  V  EA++ +GG+
Sbjct: 291 YVALNSARAYVYAVAKACDAGMTTRFDAAGAILMA-------SENAVKVSLEAVQALGGA 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GY  E  + R  R++    I  G+       +   L  G
Sbjct: 344 GYTREYPVERFLRDAKLYDIGAGTNEIRRFLIGRELLGG 382


>gi|306840952|ref|ZP_07473693.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306289009|gb|EFM60274.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 460

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 122 ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 181

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 182 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 227

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 228 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 287

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 288 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 347

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 348 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 400

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 401 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 459


>gi|21242066|ref|NP_641648.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107471|gb|AAM36184.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 393

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 80/385 (20%), Positives = 132/385 (34%), Gaps = 25/385 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD     P     + ++   G      D     +  ++             
Sbjct: 31  KQLAPHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATV 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +  ++A   T  V   W   + S              +      LTE
Sbjct: 89  DPSTSAFISIHNMATWLIASYGTDAVRAQWGQAMTSG-------------AKLGSYCLTE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +  
Sbjct: 136 PGSGSDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A
Sbjct: 195 ADAPGISYGRKEEKMGWNSQPTRGVSFENVRVPAENLLGKEGEGFKMAMKALDGGRINIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D
Sbjct: 255 ACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A +   + K +      A+  +A++  GG GYI E  I R  R+S  + 
Sbjct: 315 AGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHR 368

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFE 466
           IL G+   M + V   L  G     
Sbjct: 369 ILEGTNEVMRMIVARHLLNGEEQLR 393


>gi|300782926|ref|YP_003763217.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792440|gb|ADJ42815.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 385

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 141/408 (34%), Gaps = 34/408 (8%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G Y L+   +EL R A     +     P     D+ E +P         +  G +     
Sbjct: 4   GLYQLAEEHEEL-RAAVRALAE-KEIAPYAAEVDENERYPI--EAYNALVKSGFNAVHIG 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             ++                      A  + + +      + L  +  + K   P I S 
Sbjct: 60  EEYDGQGADAVGACIVIEEVARVDASASLIPAVNKLGTQPIILSASEGLKKLVLPSIASG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E              +    L+E+  G+D A++ ++ +   D         W  ++  S 
Sbjct: 120 E-------------ASASYALSEREAGSDTASMRARARLDGDHWVLNGTKCWITNAGESS 166

Query: 242 AFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
            + ++A  +         +   +      G      + K+G + + T E+ F N     +
Sbjct: 167 WYTVMAVTDPDAEKKANGISAFVVHKDDPGFSLGPKEKKLGIKGSPTREIYFENCT---I 223

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
            +  +   P   +K  +  LD    ++    + +A+     A+ Y + R   G  + +  
Sbjct: 224 PEDRIIGEPGTGLKTALRTLDHTRPTIGAQALGIAQGALDAAVAYVKDRKQFGKSIAEFQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A++   I AA  L +  A + +    R      A  MA   K +   +A  V  
Sbjct: 284 GVQFMLAEMGTKIEAARHLVYASAAASERGDKR------AGFMASAAKTYASDIAMEVTT 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A++  GG+GY  +  + R  R++    I  G+     + +   L KG
Sbjct: 338 DAVQLFGGAGYTRDFPVERMMRDAKITQIYEGTNQIQKVVMARALLKG 385


>gi|114563286|ref|YP_750799.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334579|gb|ABI71961.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 585

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 86/487 (17%), Positives = 180/487 (36%), Gaps = 57/487 (11%)

Query: 34  MNAYSSDS-----LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY-NTPQLHAY 87
           MN Y +       LL  +     +   ++L  + + V   TA  +   AN  +   LH  
Sbjct: 1   MNPYQAPLKDMQFLLEQVFDAQATW--EQLPAMADVVDMDTALAILDEANKISRDLLHPL 58

Query: 88  GPGGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
              G+        + +     +  + ++    G      +  F  +   +   +    + 
Sbjct: 59  NRSGDEQGVVHKGNDIITPDGFKEVYQQFSEGGWVGLCGESDFGGMGMPKMLGVLVDEMN 118

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             +        S +  +A  +       + + + P ++S ++             A  + 
Sbjct: 119 YSSCNSFTLYNSLTAGAALCINAHANDELKQTYLPNLYSGQW-------------AGAMD 165

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
           +TE   G+D+  I ++ + + DG Y ++G+K F++    D       ++LA++ G  G  
Sbjct: 166 MTEPHAGSDLKGIRTKAEPLDDGSYSITGNKIFITGGDHDLTENVIHLVLAKLPGSKGIS 225

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP++  +     G  NG+    +++K+G +++AT  + + N  GFL+G+ +     +
Sbjct: 226 LFIVPKISVNADGSLGESNGVTVGSIEHKMGLKASATCVMNYDNAKGFLVGEPDRGLVCM 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----------GGILIDQPVMKRA 358
             M     L   +  +   + +   A  YA+ R                 +I    ++R 
Sbjct: 286 FTMMNYERLAIGLQGLGNAQAAYQMASDYAKERLQGVAAAGSATGATSDPIIVHGDVRRM 345

Query: 359 IADIALDIAAATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +  I     A  ALS       D AK      +++ A Y  ++ P++K +          
Sbjct: 346 LLTIRAMTEAGRALSVYTGKQLDLAKYASGDVQAKAARYVGLLTPVSKAFLTDRGLDATV 405

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFST 471
              +  GG GYI E  I +  R++    I  G+     +D L       N+    +  + 
Sbjct: 406 MGQQVFGGHGYIRETGIEQFVRDTRIAQIYEGTNGIQAIDFLGRKITYDNVVTLTEFVAE 465

Query: 472 LEQDLGS 478
           +   L  
Sbjct: 466 VNASLAQ 472


>gi|91781807|ref|YP_557013.1| putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia
           xenovorans LB400]
 gi|91685761|gb|ABE28961.1| Putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia
           xenovorans LB400]
          Length = 595

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/446 (20%), Positives = 165/446 (36%), Gaps = 63/446 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +     + +  G      D  +       A    A    L +  +A  +  
Sbjct: 71  DGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLP-AFVNNALYEMLNSANQAWTMYP 129

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                A   +    TP + + + PK+ +  +  T             + LTE   GTD+ 
Sbjct: 130 GLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLG 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRL 261
            + ++ +  SDG Y +SG K F+SS   D       ++LA++         +  F+VP+ 
Sbjct: 177 ILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKF 236

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
           +     E G  NG+    +++K+G   NAT  +   N  G+L+G+ N     +  M    
Sbjct: 237 VPNEAGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            L   + S+    V+   ++ YA+ R                  +I  P ++R +     
Sbjct: 297 RLGVGMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKA 356

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A A S+  A   D      +   R E A    ++ PI K +    A      AM+ 
Sbjct: 357 YAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQI 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GG G+I E  + ++ R++  N I  G+     LD+L     G             D+G+
Sbjct: 417 YGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILG-------------DMGA 463

Query: 479 SGKKVITILRDSISLCKEDKGLARFL 504
             KK   ++ + +        +  F+
Sbjct: 464 KMKKFGKLVAEFVEAEGVKPEMQEFI 489


>gi|119774514|ref|YP_927254.1| butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
 gi|119767014|gb|ABL99584.1| Butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
          Length = 385

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 83/394 (21%), Positives = 150/394 (38%), Gaps = 27/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A           P   +WD+    P    +++++   G  CS++    E  
Sbjct: 7   EDQRQFADLARQFAA--DELTPFAAKWDEEHHFP--KDVIQKAGELGF-CSLYSPESEG- 60

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +  +RL      E       + T+   +  M T  V   W  + F  E+    
Sbjct: 61  ------GMGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMV-TTWGTEAFRAEWSE-- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
              +   +      LTE   G+D A++T++  +  D  Y ++G K F+S   +   +++ 
Sbjct: 112 --ALTTGAKLASYCLTEPGAGSDAASLTTKAVREGDE-YVINGSKMFISGAGATELLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G  G   +  +       G+ Y + ++K+G  +  T  + F N    +   L     
Sbjct: 169 CRTGEAGPKGISAIAIPADAEGVIYGKAEDKMGWNAQPTRLITFENVRVPVQNLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  +I Y   R   G  L     ++  +AD+A 
Sbjct: 229 GFTFAMKGLDGGRINIATCSVGTAQAALERSIAYMNERKQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D           A     + K +   +  AV   A++  GG GY
Sbjct: 289 ELVAARQMVRLAAFKLDSQDPE------ATAYCAMAKRFATDIGFAVCDAALQIHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  + RH+R+   + IL G+   M L +   L
Sbjct: 343 IREYPLERHFRDVRVHQILEGTNEIMRLIISRRL 376


>gi|239501461|ref|ZP_04660771.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 378

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 129/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  +   +    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    AN  D   
Sbjct: 249 VGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAANLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVNDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|119471968|ref|ZP_01614253.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7]
 gi|119445226|gb|EAW26517.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7]
          Length = 391

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 145/400 (36%), Gaps = 40/400 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++V S ++QE+A +A                 D    +  W  +       G+       
Sbjct: 23  DHVNSFSSQEIAPLAEQT------------DIDNTFPNQLWPQM----GEMGVLGMTVPE 66

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            F         H I    +   +        + S    + +    +    + + PK+ S 
Sbjct: 67  EFGGAGLGYLEHVIAMEEISRASASIGLSYGAHSNLCVNQINRNGSQAQKEKYLPKLISG 126

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+ ++  + +K  D         W  + P +D
Sbjct: 127 EH-------------IGALAMSEPNAGSDVVSMKLKAEKKGDKYILNGNKMWITNGPDAD 173

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
             ++ A+ +   G   +   + + +  G    +  +K+G R + T EL F N        
Sbjct: 174 TLVIYAKTDLNAGAKGITAFIVEKTFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENI 233

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+LN     +        +  A   +  M+  +   + Y   R      +    +++  
Sbjct: 234 LGNLNEGVKVLMSGLDYERVVLAAGPLGIMQACMDIVVPYIHERKQFDTPIGQFQLIQGK 293

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + AA +  + +A + D  ++  ++AA A         +  ++A  +  +A++ 
Sbjct: 294 VADMYTQMNAARSYVYTVAKACDSGETTRKDAAGA-------ILYAAELATKMALDAIQI 346

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+GYI E +  R  R++    I  G+     + +   L
Sbjct: 347 LGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 386


>gi|218892413|ref|YP_002441280.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218772639|emb|CAW28422.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 384

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 131/365 (35%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           A++ R    GL       ++  +      ++  A  L   +      L + +   +  + 
Sbjct: 39  AIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P++ S E             +     LTE   G+D A++ +   +   
Sbjct: 99  IDGTEEQKRRYLPRLASGE-------------LLSSFCLTEPDSGSDAASLKTTAVRDGQ 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  + ++A+    + G   +   + +    GL   +   K+G +
Sbjct: 146 HYVLNGTKRFITNAPQAGIYTVMARTNPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        +      G    MK+L    L  A + V      L +A+ Y
Sbjct: 206 GAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +  AA  +    A   DE +    E       A 
Sbjct: 266 ALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V   A++  GG+GYI +  I R YR+     I  G+     L +   +
Sbjct: 319 CAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNM 378

Query: 459 EKGTN 463
            +   
Sbjct: 379 IRAAQ 383


>gi|115359334|ref|YP_776472.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115284622|gb|ABI90138.1| isovaleryl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
          Length = 393

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 132/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVAEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDLDAGPRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGRSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|145225321|ref|YP_001135999.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|145217807|gb|ABP47211.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
          Length = 417

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 127/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + +G +       +                       A
Sbjct: 64  PHAADVDENARFP--QEALDALVANGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 121

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P + + E                   L+E+  G
Sbjct: 122 SLIPAVNKLGTMGLILRGSDELKQKVLPSLAAGE-------------SMASYALSEREAG 168

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   SD + ++A  +   G   +   +      
Sbjct: 169 SDAASMRTRAKADGDDWILNGAKCWITNGGKSDWYTVMAVNDPDKGANGISAFMVHVDDE 228

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 229 GFSIGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 285

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 286 QAVGIAQGALDAAIEYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYSAAARAER 345

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 346 GEGN------LGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 399

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 400 YEGTNQIQRVVMSRALLK 417


>gi|256372298|ref|YP_003110122.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008882|gb|ACU54449.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 404

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 133/383 (34%), Gaps = 23/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+    P      + +    L      +++         +          
Sbjct: 42  ERIAPHAADADRSASFP--WESFKAARELELPALGIPQAYGGQGADHVTQAVMIEEIARV 99

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +  S    + V +  +  + + + P++ S E                   L+E
Sbjct: 100 CASTSLALLISKLGMTPVMVWGSEDLKRRYLPRVASGE-------------AQASYCLSE 146

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A++T++  +  D         W  ++ +SD + + A+ +   G   +   + +
Sbjct: 147 PDAGSDVASMTTRAVRDGDSYVLSGTKAWITNAGISDTYTVFAKTDPSAGHRGISAFVVE 206

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+   +L++K+G R + T ++        +   +     G    M  L        
Sbjct: 207 ADW-GVQVAKLEHKLGVRGSPTGQIVLDEVRVPVANRIGEEGQGFYIAMGTLDRSRPMIG 265

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  A+ Y + R   G  + D   ++  IAD+A  I AA  L +R     D
Sbjct: 266 AQAVGIAQGALDAAVAYGKERRQFGRPITDNQGIQFTIADLATQIEAARGLVYRACARID 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +E       +  + K +    A  V  +A++ +GG GY  +  + R +R++    
Sbjct: 326 ADEPGTE----LTRLGAMAKLFASDTAMRVTTDALQLLGGYGYTMDFPLERMFRDAKITQ 381

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     + +   + K    
Sbjct: 382 IYEGTNQIQRIVIARQVLKEVGA 404


>gi|192290813|ref|YP_001991418.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284562|gb|ACF00943.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 145/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P    WD+    P    L  ++   GL    +   +      Q   I A   L   A   
Sbjct: 31  PFATEWDEAGGFP--RELYEKAAAIGLLGLGFPEEYGGTPCDQFMWIVATQELARAAAGG 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++     A  +A   +P +     P+I S                   L +TE  G
Sbjct: 89  VSASLNSHSIGAPPIARAGSPELKARVLPEILSG-------------KKISALAITEPSG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V  LL  G  
Sbjct: 136 GSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVSLLLIPGDT 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL    LK K+G  ++ T  L F N        L     G +  M       L  A   
Sbjct: 195 PGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGFMIIMMNFNSERLTMAAGC 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  RV L EA  YAR+R   G  L+   V++  + D+A  IAA+ A+   LA   D+ +
Sbjct: 254 IAASRVCLDEATEYARQRFTFGKPLVKHQVIRHKLVDMAQKIAASQAMLELLAWRVDQGE 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   E    +  A  T  +C        +EA++  GG+GY+    + R YR+   N+I  
Sbjct: 314 SPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGYMRGVKVERIYRDVKVNAIGG 366

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 367 GTEEIMKDLASRQM 380


>gi|301791405|ref|XP_002930673.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 478

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 137/360 (38%), Gaps = 31/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL 164
           +++     GL     +  +          I               +    +    +++  
Sbjct: 139 IIQGLFQQGLMGIEIETKYGGTGASFFSSILVIEELAKVDASVALMCDIQNTIINNLIRK 198

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      +  K+               T     + L+E   G+D+ ++ ++  K  + 
Sbjct: 199 YGTEEQKATYLTKL--------------ATEKIGSICLSEAGAGSDLFSLKTRADKKGNY 244

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  S+  +  F+++A V   +G   +   L D    GL   + +NK+G R++
Sbjct: 245 YVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITCFLVDRDTEGLHIGKAENKMGIRAS 304

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HY 338
           +T  L F N     + + N+        K  I  L+   + ++   + LA+        Y
Sbjct: 305 STCPLTFENVK---IPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPY 361

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D   ++  +A +A+ + AA  L++  A   +  +   +EA+ A     
Sbjct: 362 MKERMQFGKRIFDFQGLQHQVAHVAIQLEAARLLTYNSARLLEAGQPFIKEASMA----- 416

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  +  +   +
Sbjct: 417 --KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKYFRDAKVGTIYEGASNIQLNTIAKCI 474


>gi|293602794|ref|ZP_06685234.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818810|gb|EFF77851.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 392

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 144/400 (36%), Gaps = 22/400 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A  N  Q     P     D+ +  P    L R+    G+     D  +   
Sbjct: 11  GEDLDMLRDAVRNFAQAE-IAPRAAEVDRSDQFPM--DLWRKFGELGVLGMTADEEYGGA 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 68  NMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGTTAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADKKGDRYVLNGTKMWITNGPDADTLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPEAHQRGITAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A++S   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVKVLMSGLDYERAVLSGGPLGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  +++  + D  K  +E     R        +  + A  +  E ++ +GG+G
Sbjct: 295 TTLQASRAFCYQVGKNLD--KLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R +R++    I  G+     + +   L   T 
Sbjct: 353 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETA 392


>gi|288931380|ref|YP_003435440.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288893628|gb|ADC65165.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 381

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 146/375 (38%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G  +D+ + +P    + +++   G   +     ++        +   +  +  A    
Sbjct: 26  PYGREYDEKKQYPM--EIYKKAAKLGYIGASVPEEYDGAGMDCLAEAIISMEFCRADSSI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +     MV    +     ++  K+   E                 + +TE   G
Sbjct: 84  GSAIDLATLGVPMVLRFGSEEQK-EFVAKVVRGEGP-------------SAIAVTEPDCG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEG-RVGCFLVPRLLEDGS 266
           TD+AA+ ++  K  D  + ++G K F+++     + ++LA+          +   L +  
Sbjct: 130 TDVAAMRTRAVKEGDE-WVINGTKQFITNGSVGIYTVVLAKTAQVDPPHRGISAFLVEQD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G   + ++ K+G   + T E+   N       L+G+ N     +        +  A +
Sbjct: 189 REGYEARPIE-KMGMHCHDTCEVALKNVRVPADHLIGEENRGFYQLMAFFNESRVKIAAL 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                  +   A+ YA+ R   G  LI+   ++  +A++  DI AA  L F+ A   D+ 
Sbjct: 248 HTGIAIGAYERALEYAKERKAFGKPLIEHQAIQFKLAEMFKDIEAAKLLVFKAAWLIDQG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K           ++   K +  +MA  V  EA++  GG GY +E  + R+YR++   +I 
Sbjct: 308 KPDPA-------LSSAAKLFASEMAVKVTYEAVQIFGGYGYSKEYDVERYYRDARVGTIY 360

Query: 444 LGSGNAMVLDVLNLL 458
            G+  A  + +   +
Sbjct: 361 EGTSEAQKMVIARRI 375


>gi|289664949|ref|ZP_06486530.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 382

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 147/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A ++   L          D V   PA   L R     GL    
Sbjct: 4   ELGEEI-DLLRESVAAFAGHHIAPL----AAAADHDNV--FPA--QLWRLFGEQGLLGLT 54

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  +        AH +    +            + S    + +    +P   + + PK+
Sbjct: 55  VEEDYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASPEQKQRYLPKL 114

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 115 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRYVLNGSKMWITNGP 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 162 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCQVPA 221

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 222 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGSFQLM 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 282 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 335 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 377


>gi|206564273|ref|YP_002235036.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198040313|emb|CAR56298.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 393

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 132/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRRDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|159185755|ref|NP_357135.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140889|gb|AAK89920.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 375

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 136/395 (34%), Gaps = 31/395 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +++AR             PG    D+    P     L+     G    +    +   
Sbjct: 8   QQIRDMARDFAR-----ERLSPGAAARDRESRFP--KDELKEMGELGFLGMLVSEDYGGS 60

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A             +MS   +   +  L   T    + + PK+ + E+   
Sbjct: 61  ETGAVAYALALEEIAAGDGACSTIMSVHNSVGCVPILKFGTEEQKQRFLPKLAAGEW--- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                       G  LTE + G+D + + ++ ++  D        ++  S    D  I+ 
Sbjct: 118 ----------IGGFALTEPQAGSDASNLKTRARRDGDRYVLDGAKQFITSGKNGDVIIVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLN 303
           A  +   G   +   +      G    R++ K+G  S+ T ++ F+     +   LG+  
Sbjct: 168 AVTDAAAGKKGITAFIVPTDTPGYEVIRVEEKLGLHSSDTCQIAFTEMAVPVDLRLGEEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  +V   + +   A  YAR R   G  +I+   +   +AD+A
Sbjct: 228 QGYRIALANLEGGRIGIAAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L    A   +  +    EA+ A       K +  +MA  V ++A++  GG G
Sbjct: 288 TRITAARQLVLHAAALKEAGEPCLSEASMA-------KLFASEMAERVCSDAIQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R YR+     I  G+ +   + +   L
Sbjct: 341 YMADYPVERIYRDVRICQIYEGTSDVQRMVIARNL 375


>gi|255320722|ref|ZP_05361899.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262380647|ref|ZP_06073800.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255302338|gb|EET81578.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262297595|gb|EEY85511.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 600

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/488 (19%), Positives = 176/488 (36%), Gaps = 59/488 (12%)

Query: 67  SCTAQE--LARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDGLHCS 118
           S    E  L   A++   +L      G++         V     +    ++ +  G    
Sbjct: 36  SAEILEQYLEAAADFCQNELLPLNRIGDQQGCKLENGVVTTPDGFKDAYKKYVELGFTSL 95

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D  +         +I  + +        G     S  +   +    + +  + +  ++
Sbjct: 96  TGDEQYGGQGFPTLFRIAISEIITSTNWAWGMYPGLSHGAMRTIEHHGSEQQKQHYLTRL 155

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+  T             + LTE   G+D+  I ++    +DG Y +SG K F+S+ 
Sbjct: 156 ISGEWTGT-------------MCLTESHAGSDLGLIRTKAVPNTDGSYAISGEKIFISAG 202

Query: 239 MSD-----AFIMLAQV------EGRVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+   D        NG+    L++K+G  
Sbjct: 203 EHDLAENIIHIVLARLPDAPAGTKGISLFIVPKFNLDSDGNIAERNGVVCSALEHKMGIH 262

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            NAT  L F    GFL+G  N     +        + +AI  ++    S   A+ YAR R
Sbjct: 263 GNATCVLNFDQAKGFLIGPENRGLNCMFTFMNSARIGTAIQGLAASEASYQGALAYARER 322

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSE 388
                             +I  P +++ +    +    + AL++ L+   D A+  +  +
Sbjct: 323 LAMRSLAGPQHPELPADPIIVHPAVRQMLLTQKVFAEGSRALAYYLSTYVDMAEFSNNED 382

Query: 389 EAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           E   A      + PI K +  +         M+  GG GYI E  + +  R++    +  
Sbjct: 383 EKEQAENKLALLTPIAKAFMTETGVESAKHGMQIFGGHGYIAEHGMEQIARDARIACLYE 442

Query: 445 GSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSS--GKKVITILRDSISLCKEDKGL 500
           G+     +D+L     G   NL + L   +++         K    ++    L KE   L
Sbjct: 443 GTTEIQAIDLLARKVIGSKGNLLKALTDEIQEFTAQHQQHDKFSAQVQQLEQLVKEWLEL 502

Query: 501 ARFLTEKI 508
            R + +K+
Sbjct: 503 TRDVVDKM 510


>gi|324997836|ref|ZP_08118948.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 63/408 (15%), Positives = 137/408 (33%), Gaps = 32/408 (7%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
                Y LS   Q L R A  +        P     D+   +P+        +  G H  
Sbjct: 3   SDFDSYRLSDEHQAL-RDAVRDLAD-KEIAPYAAEVDEEGRYPS--EARDALVRAGFHAV 58

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
           I    +      +                +  +   +    + + L  +  + K   P +
Sbjct: 59  IIPEEYGGQGADELAGCIVIEEVARVCASSSLIPGVNGLGLTPILLSASDELKKQVLPSV 118

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E               +   L+E+  G+D A++ ++ ++  D         W  ++ 
Sbjct: 119 AAGE-------------AMVSYALSEREAGSDAASMKTRARRDGDDWILNGTKCWISNAG 165

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            S  + ++A  +       +   +      G      + K+G   + T E+ F +     
Sbjct: 166 ESTWYTVMAVTDPEKKANGISAFVIHADDPGFVVGSKERKLGIHGSPTREIHFEDCR--- 222

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           +    +        K  +  LD    ++    V +A+     A  Y + R   G  L + 
Sbjct: 223 IPGDRIIGAEGTGFKTALRTLDHTRPTIGSQAVGIAQGALDVATRYLKERRQFGQALAEF 282

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A+ + AA  L +  A+  +  +           ++   K +    A +V 
Sbjct: 283 QGLQFMLADMAMKVEAARQLCYVAASRAERNEPD------LGFVSSAAKCFASDTAMSVT 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++ +GG+GY  +  + R  R++    I  G+     + +   L K
Sbjct: 337 TDAVQLLGGAGYTRDFPVERMMRDAKITQIYEGTNQIQRMVMARSLLK 384


>gi|262374894|ref|ZP_06068128.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309907|gb|EEY91036.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 600

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/489 (19%), Positives = 169/489 (34%), Gaps = 63/489 (12%)

Query: 59  ELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E +   ++    +  A    N  +P        G  W D V   P  +    ++ I  G 
Sbjct: 33  ENVSRELVDQYLEAAADFCENELSPINQTGDREGCTWNDGVVTTPTGFKEAYQKYIELGF 92

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +  +       +  I  + +   A    G     S  +   +    +      + 
Sbjct: 93  PSLSAEEQYGGQGLPNSLGIAISEMVGTANWAWGMYPGLSHGAVRTLEHHGSAEQKDAYL 152

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+
Sbjct: 153 PKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPQADGSYAISGEKIFI 199

Query: 236 SSPMSDA-----FIMLAQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G   G   +   +            G  NG+    +++K+
Sbjct: 200 SAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNLNADGSIGERNGVRCGSIEHKM 259

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + F N  GFL+G  N     +        + +A+  ++    S   A+ YA
Sbjct: 260 GIHGNATCVINFDNAKGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGSFQGALAYA 319

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P ++  +           AL + LA   D  +  +
Sbjct: 320 KDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAYAEGGRALVYLLAQYADVVEHAA 379

Query: 388 EEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           EEA          ++ PI K +  +         ++  GG G+I E  + +  R++    
Sbjct: 380 EEADRKFADNILSLLTPIAKAFLTETGSEAAKHGVQVFGGHGFISEHGMEQIVRDTRIAC 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD+L     GT              G+  K    I+       K++  + 
Sbjct: 440 LYEGTTEIQALDLLGRKVLGTQ-------------GAMLKDFTKIIHKFAEAHKDNAAMK 486

Query: 502 RFLTEKIAL 510
            F+    AL
Sbjct: 487 EFVEPLAAL 495


>gi|237737830|ref|ZP_04568311.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419710|gb|EEO34757.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           mortiferum ATCC 9817]
          Length = 373

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 143/378 (37%), Gaps = 41/378 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P     ++    +G+    +++ +  +       + A      A    
Sbjct: 26  PIAAKIDKEASFPV--NTIKLLGENGIMGIPFEKKYGGLEMDNLTYVAAVEELSKACAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +  +  +A   T      +   + S                    G TE   
Sbjct: 84  GVIMSAHTSLCSWPIATYGTEEQKIKYLTPLASG-------------KKLGAFGWTEAEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GT      +   K  +  Y L+G K    +S  +D F++ A+ +   G   +   + +  
Sbjct: 131 GT-----KTTAIKNEN-KYVLNGKKVLITNSHEADIFVVFAKTDLENGT--LSAFIVERG 182

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G      ++K+G R ++T EL F N     + + N+     E +KI +  L+   + V
Sbjct: 183 TKGFSVGEAEDKMGVRGSSTAELFFDNCT---IPEENLLGNLGEGLKIAMSTLNGGRIGV 239

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V LA+     AI Y + R   G  +      +  IAD+   I AA  +++R AN  
Sbjct: 240 AAQAVGLAQGALDAAIDYVKNRMQLGKPISHHQNTQFVIADLQTKIDAARLMTYRAANMK 299

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +           MA + K +  ++A  V  +A++  GG+GY ++  + R  R++   
Sbjct: 300 DLGEDYG-------YMASMAKLFASEIAMEVTTKAVQLFGGNGYSKKFPVERMMRDAKVT 352

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   +
Sbjct: 353 EIYEGTSEVQKVVIAAHM 370


>gi|146284172|ref|YP_001174325.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572377|gb|ABP81483.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 619

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 91/489 (18%), Positives = 179/489 (36%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E A+        L+      G  W +  V+    +     + +  G      
Sbjct: 55  DMVNAILDEGAKFCEQVLAPLNRVGDIEGCTWSESGVKTPTGFKEAYEQYVAGGWPSLAH 114

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S    + +A   T      +  K+ S
Sbjct: 115 DVEHGGQGLPESLGLAISEMIGQANWSWGMYPGLSHGCMNTIATHGTDDQKHTYLTKLVS 174

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  + ++ +  +DG Y L+G K F+SS   
Sbjct: 175 GQWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKLNGTKIFISSGEH 221

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L     E G  NG+    +++K+G   N
Sbjct: 222 DMAENIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGEAGERNGVSCGSIEHKMGIHGN 281

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V+    I YAR R  
Sbjct: 282 ATCVMNFDGATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGIKYARERLQ 341

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 342 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDVMQRSQDEEQR 401

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 402 KAADAMLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISCLYEGT 461

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   ++ G   +    + ++   ++ G    
Sbjct: 462 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQANEGNDTVKEFVEPLAKLNKEWGE--- 518

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 519 LTMKVGMAA 527


>gi|146309093|ref|YP_001189558.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577294|gb|ABP86826.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 592

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 90/496 (18%), Positives = 178/496 (35%), Gaps = 56/496 (11%)

Query: 56  KELELLGEYV----LSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLR 108
            EL  L E V     S   +E  ++   +   L+      G  WD   V+    +    +
Sbjct: 26  AELPALAEVVDAETASAILEEAGKVTAGSIAPLNRSGDEEGCSWDNGAVKTPAGFPEAYQ 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G         F  +   +    +   +   A L  G     +  +   +    + 
Sbjct: 86  TYAEGGWVGVGGSPEFGGMGMPKVIGAQVEEMVNSANLSFGLYPMLTAGACLSILNHASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ELKAQYLPNMYAGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP+ +       G  N L  
Sbjct: 193 SGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVGADGSLGEKNALGC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+L+G++N     +  M     L   I  ++    S 
Sbjct: 253 GSIEHKMGIKASATCVMNFDGATGYLVGEVNKGLNAMFTMMNYERLGVGIQGLALGERSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             AI YAR R  S               +I  P ++R +  +        A S  +A   
Sbjct: 313 QSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAMQL 372

Query: 381 DEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D AK      +         ++ P+ K +   MA        +  GG G+I E    +  
Sbjct: 373 DTAKYSEDKDTAKRADELVALLTPVAKAFLTDMALETTVHGQQIFGGHGFIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R+     I  G+     LD++   ++  G + ++ L   ++  + S+   +    +   +
Sbjct: 433 RDCRITQIYEGTNGIQSLDLMGRKIVGSGGSYYKHLADEIKAFVASADASLAEFTKPLAA 492

Query: 493 LCKEDKGLARFLTEKI 508
             +    L  ++ ++ 
Sbjct: 493 AVQNLDELTAWVLDRA 508


>gi|325523056|gb|EGD01469.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 383

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 130/358 (36%), Gaps = 26/358 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        F  +      ++ A      A      L+  +V   S  +    TP  
Sbjct: 46  ALGLFGLTIPERFGGLELTMEEEVLAVFELCQASPVFRSLLGTTVGIGSQGILFDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E             +     LTE   G+D A++ +   +  D       
Sbjct: 106 QEKYLPRLATGE-------------LIASFALTEPEAGSDAASLRTTAIRDGDDYVVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   +   + D    G+ + +   K+G +   T ++
Sbjct: 153 KRFITNAPHAGIFTLMARTNPDDKGSGGISAFIVDAKSPGISFGKRDKKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        +      G    MK+L    +  A + V+     L+ A+ YA  R   
Sbjct: 213 IFDNVRVPAANLIGGKEGQGFKTAMKVLDKGRIHIAAVCVAVAERMLSMALAYAMERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D  +++  +AD   +I AA  +    A   D+    S E       A   K +  
Sbjct: 273 GKPIADFQLVQAMLADSKAEIYAARCMVLDAARRRDDKLPVSTE-------ASCAKLFAS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +M   V   A++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 326 EMCGRVADRAVQIFGGAGYMAEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMVRDAQ 383


>gi|254466611|ref|ZP_05080022.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687519|gb|EDZ48001.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 386

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 144/397 (36%), Gaps = 31/397 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P  +  D+    PA   L +     GL        F  
Sbjct: 9   DLGEDVNALRDVVHRWAQDRVKPMAQEIDQKNEFPA--DLWQEMGELGLLGITVPEEFGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L       + + P++ S E+  
Sbjct: 67  AGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNAEQKQKYLPRLISGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ +++ + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMSLRAEKRNDHFRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPEAGSKGITAFLIEKEMKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A + +  M   + E + Y   R   G  + +  +M+  IAD+
Sbjct: 234 GKGVRVLMSGLDYERVVLAGIGLGIMASCMDEMMPYMAERKQFGQPIGNFQLMQAKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A S D      ++AA           +  ++A     +A++  GG+
Sbjct: 294 YTAMNSARAYVYEVAKSCDNGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 347 GYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|323140382|ref|ZP_08075312.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067]
 gi|322415138|gb|EFY05927.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067]
          Length = 380

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 141/404 (34%), Gaps = 36/404 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+    EL  M            P     D          L+ ++   GL   I   
Sbjct: 3   DFALNEEQLELQEMVREFVE--KEITPYAAEMDAENHMRDG--LIDKANEMGLLNVIVPE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
             +                          ++ +  +   V L  T    K +   +    
Sbjct: 59  ELDGPGLDSISVATIYEELGKGCAGVATSLAANSLATVPVLLAGTDEQKKMYCDIL---- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPM-S 240
                              LTE   G+D   ++++      +G Y L+G K F+++   +
Sbjct: 115 ----------NNGGLAAFALTEPGAGSDAGGVSTRAVHNKEEGTYTLNGTKMFITNGGLA 164

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           + F++ A      G   +   +      G    + +NK+G R + T EL   +       
Sbjct: 165 EIFLVFANTRKTGGIRGLTAFIVPKDTPGFSVGKKENKMGIRPSNTTELVLQDVVIPESY 224

Query: 301 DLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
            +       E  +I +  LDSA      +SV   + +L  A+ YA+ R   G  +    +
Sbjct: 225 RVGREG---EGFRIAMNTLDSARPFVGAVSVGIAQAALDCAVKYAKERRQFGQPIASFQM 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+A+ +  A  +  +     D+    S+EAA A+        +    A  V  +
Sbjct: 282 VQGMLADMAMKVETARLMVQKACWMRDQGMEFSKEAAMAKC-------YAADTAMQVTTD 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++ +GG GY +E  + +  R++    I  G+     L + N L
Sbjct: 335 AVQVMGGYGYTKEYPVEKMMRDAKIMQIYEGTNQIQRLVIANKL 378


>gi|49088532|gb|AAT51580.1| PA2015 [synthetic construct]
          Length = 388

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    + R+    GL     D  +        AH +    +   +   
Sbjct: 31  PRAAQIDQDNQFPM--DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + P + S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++ D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 VGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNASRAYLYAVAAACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GY  E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYTNEFPTGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|85713881|ref|ZP_01044870.1| Acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85699007|gb|EAQ36875.1| Acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 411

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 143/403 (35%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE       +E+ R  + N        P     D     P    L  R    GLH   
Sbjct: 33  HLGETA--DAIREMVRDFSANE-----IAPRAAEIDSSNHFP--RDLWPRLGALGLHGIT 83

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  +         H I    +   +        + S    + +    +    + + PK+
Sbjct: 84  VEEDYGGAGLGYLEHCIAMEEISRGSASVGLSYGAHSNLCINQLRRNGSEAQKRKYLPKL 143

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E                 L ++E   G+D+ ++T++  K  D         W  +  
Sbjct: 144 ISGEN-------------VGALAMSEPGAGSDVVSMTTRADKKGDRYVLNGSKMWITNGT 190

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +++  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F +     
Sbjct: 191 IAETLVVYAKTDTAAGARGITAFIVEKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPE 250

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L  +   V  +   +  + A+++   +  M+  +   + Y   R   G  +    ++
Sbjct: 251 DNVLGDAGHGVSVLMSGLDYERAVLAAGPLGIMQACMDIVMPYVHERKQFGQPIGSFQLV 310

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  +   E+AA A         +  + A     +A
Sbjct: 311 QAKVADMYVTMNACRAYVYAVAKACDRGEITREDAAGA-------ILYSAEKATQCALDA 363

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R  R++    I  G+     + +   L
Sbjct: 364 IQLLGGNGYINDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 406


>gi|225686072|ref|YP_002734044.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256262803|ref|ZP_05465335.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642177|gb|ACO02090.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263092625|gb|EEZ16846.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410399|gb|ADZ67463.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326553692|gb|ADZ88331.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 136/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LT+   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTKPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T  
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSN 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|281203924|gb|EFA78120.1| isovaleryl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 424

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 144/392 (36%), Gaps = 42/392 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     DK    P    + ++    GL        +  + +   AH I    L   +   
Sbjct: 58  PIAADVDKNNAFPMH--MWKKMGDLGLLGITAPSEYGGLDMGYTAHCIAMEELSRASASV 115

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +  + + PK+ S ++                L ++E   
Sbjct: 116 ALSYGAHSNLCVNQITRNGNQKQKEKYLPKLISGDF-------------VGALAMSEPNA 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ ++  K S G        W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 163 GSDVVSMKTRATKTSGGWVLNGTKMWITNGPDADVLVVYAKTDINAGSKGITAFLIEKGM 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F + F     D NV     + +K+L+  LD   + +S
Sbjct: 223 KGFSTGQKLDKLGMRGSNTCELIFEDCFVP---DENVLQDVGKGVKVLMSGLDYERLVLS 279

Query: 327 G---------------MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                           M+  +   + Y  +R   G  + +  +M+  +AD+   + A+ +
Sbjct: 280 AGPLGIFINSSHVISIMQACMDNVVPYLHQREQFGKKIGEFQLMQGKVADMYTIMNASRS 339

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A S D   +  ++             +  + A     +A++ +GG+GYI E    
Sbjct: 340 YVYSVAKSADNGYTSRKD-------CAAVILYTAENATQCALQAIQTLGGNGYINEFPTG 392

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           R  R++    I  G+     + +   +   T+
Sbjct: 393 RLLRDAKLYEIGAGTSEIRRMLIGREIFAETD 424


>gi|56476513|ref|YP_158102.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312556|emb|CAI07201.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 131/363 (36%), Gaps = 26/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+      GL        ++ +    +   +    +   +        + +   A  +
Sbjct: 38  QELVDEMKELGLFGLSIPEEYDGMGLTMEEEVLATFEIGKTSPCFRSLFATNNGIGAQGI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    + + PK+ S E             +     LTE   G+D A++ +  ++  
Sbjct: 98  VIDGTEEQKRHYLPKLASGE-------------IIGSFALTEPDSGSDAASLRTSARRDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D        ++  ++P +  F ++A+      G   +   + +    GL    +  K+G 
Sbjct: 145 DCYVLNGTKRYITNAPEAGIFTVMARTTPDSHGAHGISAFIVEQGTPGLSLGPIDRKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           +     ++ F +        +      G    MK+L    ++ A + V      L +A+ 
Sbjct: 205 KGAHICDVIFDDCRVPAANLIGGREEVGFKTAMKVLDKGRINIAAVCVGVAERMLDDALR 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   +I AA ++    A   D+      EAA A    
Sbjct: 265 YALERKQFGKPIAEFQLIQAMLADSKAEIYAARSMVLDAARRRDDGLDVGTEAACA---- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V   A++  GG+GY+ E  I R YR+     I  G+     L +   
Sbjct: 321 ---KLFASEMCGRVADRAVQIFGGAGYLAEYGIERFYRDVRLFRIFEGTTQIQQLVIARN 377

Query: 458 LEK 460
           + +
Sbjct: 378 MIR 380


>gi|262279538|ref|ZP_06057323.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259889|gb|EEY78622.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 378

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 130/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   T +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLVCGITLAYGTEQQKQAYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDQWVINGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  +   N    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITLENCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA +R   G  L+    +   +AD+A  I AA  L    A   DE  
Sbjct: 249 VGMARAAFDAAVQYANQRKAFGVELVQHQAVSFRLADMATQIEAAHQLVLHAATLKDEGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +E++ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKESSMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|169628281|ref|YP_001701930.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169240248|emb|CAM61276.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 382

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 142/377 (37%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ ++ P    +  ++   G+     +         +              
Sbjct: 22  HIAPHALDWDRDKYFPV--EIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGC 79

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S    +A M+         + W P + + E                   LTE 
Sbjct: 80  SAVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTME-------------TIGAYCLTEP 126

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA+ +   +  D  Y L+G K F+S    +D ++++A+  G  G   +  ++  
Sbjct: 127 ECGSDAAALRTSAIRQGDE-YVLNGVKQFISGAGAADLYVVMART-GGPGPRGISTIVVP 184

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T ++ F +    +   +G+  +             L+ A
Sbjct: 185 KGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGRLNIA 244

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L + I Y R R   G  LI    ++  +AD+A ++ AA  + +R A +  
Sbjct: 245 SCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVT 304

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E   R+ E      +  + K     +   V  EA++  GG GY+ E  I +  R+   + 
Sbjct: 305 EGDPRAAE------LCAMAKRIATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQ 358

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M + V   L
Sbjct: 359 ILEGTNEIMRVIVSRKL 375


>gi|255318748|ref|ZP_05359975.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378073|ref|ZP_06071230.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304246|gb|EET83436.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299358|gb|EEY87270.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 78/381 (20%), Positives = 147/381 (38%), Gaps = 30/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P      + +  PA   ++++    GL        +E +      ++R A  L   +   
Sbjct: 25  PRENEVAETDEIPA--DIVQQMRELGLFGLTIPEEYEGLGLTMEEEVRVAFELGRTSPAF 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   AS + +  T    + + P+               K  +     LTE   
Sbjct: 83  RSLIGTNNGIGASGLIIDGTEEQKQYYLPRF-------------AKGEIIGSFCLTEPES 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDG 265
           G+D A++ +   K  D  Y L+G K F+++ P + AF ++A+    + G   +   + D 
Sbjct: 130 GSDAASLRTTAVKD-DDFYILNGTKRFITNAPHAGAFTVMARTNSEIKGARGISAFIIDS 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSA 321
              G+   +   K+G +   T ++ F N        +      G    MK+L    L  A
Sbjct: 189 KTPGISLGKRDQKMGQKGAHTCDVIFENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV      L +A+ YA  R   G  +    +++  +AD   +I AA  +    A   D
Sbjct: 249 ALSVGAAVRMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEIYAAKCMVLDAARRRD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + ++ S E       A  +K +  +M   V    ++  GG+GYI E SI R YR+     
Sbjct: 309 QGENISTE-------ASCSKMFATEMCGRVADRCVQIHGGAGYISEYSIERFYRDVRLFR 361

Query: 442 ILLGSGNAMVLDVLNLLEKGT 462
           +  G+     + +   + +  
Sbjct: 362 LYEGTTQIQQIIIARNMIREM 382


>gi|221200243|ref|ZP_03573285.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221205924|ref|ZP_03578938.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221209281|ref|ZP_03582262.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221169969|gb|EEE02435.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221173936|gb|EEE06369.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221179584|gb|EEE11989.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 393

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 146/407 (35%), Gaps = 35/407 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +++E+L + V +  A+E+A              P     D+ +  P    L ++    G+
Sbjct: 13  EDIEMLRDAVATFAAKEIA--------------PRAAEVDRTDQFPM--DLWKKFGDLGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    T    + +
Sbjct: 57  LGMTVAEEYGGANMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTEAQKRKY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  +  K  D         W 
Sbjct: 117 LPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTDVDAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L    G V+ +   +  + A++S      M   L   + Y   R   G  + +
Sbjct: 224 EVPEENILGQLNGGVKVLMSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGE 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+     A  A  + +    D A   S+     R        +  + A  +
Sbjct: 284 FQLIQGKVADMYTTFQACRAYLYAVGRHLDSA--GSDHIRQVRKDCAGVILYTAEKATWM 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 342 AGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|260802288|ref|XP_002596024.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae]
 gi|229281278|gb|EEN52036.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae]
          Length = 1110

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 126/375 (33%), Gaps = 26/375 (6%)

Query: 89   PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
            P  +  DK    P      ++    GL        +         H +    +   +   
Sbjct: 711  PLADEIDKNNDFPGIREFWKKLGDMGLLGMTVPTEYGGTGMGYLDHCLAMEEISRASGAI 770

Query: 148  AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                 + S    + +           + PK+ S E+                L ++E   
Sbjct: 771  GLSYGAHSNLCVNQLVRNGNEEQKAKYLPKLISGEHFG-------------ALAMSEANA 817

Query: 208  GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDG 265
            G+D+ ++ ++ +K  D         W  + P +D  ++ A+ E         V   + + 
Sbjct: 818  GSDVVSMRTKAEKHGDYYVLNGTKFWITNGPDADTLVVYAKTEPHADKPQHGVTAFIIER 877

Query: 266  SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
               G       +K+G R + T EL F +       +LG +N     +     +     A 
Sbjct: 878  GMEGFSTSPKLDKLGMRGSNTCELVFEDCKVPASHVLGQINKGIYVLFSGLDIERCFLAA 937

Query: 323  MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +  M+  L   + Y   R   G  +    +M+  +AD+   ++   +  + +A + D 
Sbjct: 938  GPLGVMQSVLDVTVPYLHTREAFGQKIGTFQMMQGKMADMYTQLSVCRSYVYNVARALDR 997

Query: 383  AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 ++ A A         +  + A  V  + ++C+GG+GY+ +    R  R++    I
Sbjct: 998  GCIIPKDCAGA-------ILFAAECATKVALDGIQCLGGNGYVNDYPTGRFLRDAKLYEI 1050

Query: 443  LLGSGNAMVLDVLNL 457
              G+     L +   
Sbjct: 1051 GAGTSEVRRLIIGRA 1065


>gi|218778890|ref|YP_002430208.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760274|gb|ACL02740.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/466 (19%), Positives = 166/466 (35%), Gaps = 52/466 (11%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +KV    ++H                D               A   ++ A          
Sbjct: 69  NKVTVPESFHRPYELLCEGEWVAMQEDPEVGGQGMPAMVAQAAGEYFVGANCAFMMYPGL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +  +V +  T +  + +   +++ ++  T             + LTE   G+D+ A+
Sbjct: 129 SHGAGHLVEVFGTDKQKELYLKNMYTGKWGGT-------------MLLTEPEAGSDVGAL 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+  +   DG Y +SG K F+S    D        +LA++EG       +  F VP++  
Sbjct: 176 TTTAKPNGDGTYSISGTKIFISGGEHDLTENIIHPVLARIEGAPAGTAGISLFAVPKIWV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +   R++ K+G   + T  L         G LLG+ N     +  M   
Sbjct: 236 NDDGSLGEDNDVVCDRIEEKMGIHGSCTCVLTLGGKGKCKGTLLGEENKGMRAMFQMMNE 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGGI------LIDQPVMKRAIADIA 363
             L   +   S    +   A+ Y R+R                  +I+ P ++R +  + 
Sbjct: 296 ARLGVGLQGFSMASCAYMYALDYTRQRKQGKNLLEFANPDAQSVTIINHPDVRRMLMTMK 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIM------APITKYWCCKMAPAVIAEAME 417
             I    +  + + N FD+ K+   E    + M       P+ K +C   A  V + A++
Sbjct: 356 AYIDGMRSFLYFVGNCFDKHKTAGNEEEAEKYMNLIEVLIPVIKAYCTDRAFDVCSLAVQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
             GG GY +E  + +  R++    I  G+     +D+L   L  KG   F +L   + Q 
Sbjct: 416 SYGGYGYTKEYPVEQLLRDTKITCIYEGTNGIQAMDLLGRKLGMKGGKPFMELMGVMMQT 475

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           +  + +  +  L   +       G    L  K A++      +   
Sbjct: 476 VAEAKEAGLEDLAAKVEAAVNGAGEIAMLMGKTAMSEKVLTAFAHA 521


>gi|327404531|ref|YP_004345369.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327320039|gb|AEA44531.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 380

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 133/369 (36%), Gaps = 24/369 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+ +  P     +++    G    + D  +          + A  +  +++++A   +
Sbjct: 30  DRDREQRFPV--EEMKQLGELGFLGMMVDPKYGGGGMDTMSYVLA--MEEISKVDASTSV 85

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             SV ++ +               K  + E       P+ K        L+E   G+D  
Sbjct: 86  CMSVNNSLVCW----------GLEKFGNEEQKVKFLTPLAKGEKIGAFCLSEPEAGSDAT 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +  +    + D         W  +   +  +I++AQ    +G   +  L+ +    G   
Sbjct: 136 SQRTTAIDMGDYYLVNGTKNWITNGSTASTYIVIAQTNAELGHRGINALIIERGMEGFIV 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMR 329
              ++K+G R + T  L F +        +     G    MK L    +  A  ++    
Sbjct: 196 GAKEDKLGIRGSDTHTLMFQDVKVPKANRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAA 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y++ R   G  +     +   IAD+A +I AA  L +R A   D  ++  + 
Sbjct: 256 GGFELAAAYSKERKAFGKEIYKHQAIAFKIADMATEIEAARLLVYRAAADKDAGRNFDQS 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           +A A       K +  K+A     EA++  GG GY++E  + R  R++    I  G+   
Sbjct: 316 SAMA-------KLYASKVAMEQTVEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGTTEV 368

Query: 450 MVLDVLNLL 458
             + +   +
Sbjct: 369 QKIVISRNI 377


>gi|126459452|ref|YP_001055730.1| butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548]
 gi|126249173|gb|ABO08264.1| Butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548]
          Length = 410

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 134/380 (35%), Gaps = 26/380 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL++    G         +          +  +  +             +    + + 
Sbjct: 49  WDLLKKIAEQGFFGIGIPEKYGGQGGDHRMAVIMSEEFCRVLPGLSVYFGTNELFLTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P             P+ +        +TE   G+D+A I ++ +K+ +
Sbjct: 109 LFGTEEQKQKYVP-------------PIARGEKFGAFAVTEPCCGSDVAGIQTKAEKVGN 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                    +  SS ++D FI+LA+     + ++    +   + +    G   ++  +K+
Sbjct: 156 KWVINGRKAFISSSDVADYFIVLARTYPPPDKKLRYLGLTFFIVEKGTPGFKIEQCYHKM 215

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G   N   EL F N        +     G +  M+      +  A  +V  M+    +A 
Sbjct: 216 GLHGNHVCELVFENVEVPDENRVGEEGMGFLYAMETFDRTRIGVAAQAVGMMQGVFEKAF 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   G  +     ++ ++ ++   I  A  L++  A   DE +           +
Sbjct: 276 QYVHQRQAFGLPIAAFQAIQFSLVEMMTKIMTARLLTYLAAKLADENRKE------FTFV 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + KY+   +A  VI+EA+   GG G I E  + R+ R+     I  G+ N   L    
Sbjct: 330 ASLAKYYATSVAEEVISEAINLHGGVGVIVETGVERYLRDVKITQIYEGANNIQKLVAYR 389

Query: 457 LLEKGTNLFEQLFSTLEQDL 476
            L +      Q+   + + +
Sbjct: 390 QLIRILKEKGQIPDEIAKFV 409


>gi|311695370|gb|ADP98243.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 623

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 87/484 (17%), Positives = 168/484 (34%), Gaps = 63/484 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A+        L+      G  W  D V+    +    ++ +  G      
Sbjct: 61  DMVDAIIGEGAKFCEQVLSPLNQVGDKEGCTWSEDGVKTPTGFKEAYQQYVEGGWPSMTA 120

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   A    G     S  + + +    T    + +  K+ S
Sbjct: 121 DPNYGGQGLPHSLGLVMSEMVGTANWSFGMYPGLSHGATNTIEEHGTEEQKQTYLTKLIS 180

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 181 GEWTGT-------------MCLTEPHCGSDLGTLRTKAEPNADGTYAITGTKIFISAGEH 227

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++ G       +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 228 DMAENIVHIVLARLPGAPEGTKGISLFIVPKCLPNEDGSAGERNAVSCGSIEHKMGIHGN 287

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        + +AI  +    +    ++ YA+ R  
Sbjct: 288 ATCVMNFDGAKGWLIGPENKGLNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKERLA 347

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +         A AL +  A   D        + R
Sbjct: 348 MRSLSGPKNPEGIADPIIVHPDVRRMLLTQKAVAEGARALIYLTAQQADVVHSGKTEEER 407

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  ++        M+  GG G+I E  + ++ R++    I  G+
Sbjct: 408 KAADEALGFLTPIAKAFLTEIGYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGT 467

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G S K     +        ED+ L  F+  
Sbjct: 468 TGIQALDLLG-------------RKVLMTQGESLKGFTKQVHLFCKENAEDEQLKEFIEP 514

Query: 507 KIAL 510
             A+
Sbjct: 515 LAAM 518


>gi|289625122|ref|ZP_06458076.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867993|gb|EGH02702.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 387

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + DK    P    + R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAQIDKDNLFPV--DMWRKFGEMGVLGITVSEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ + +     +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLQKAAHGISAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V  +   +  +  ++S   
Sbjct: 196 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGTLDGGVRVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y       G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 TGIMQACMDVVVPYIHDPKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|302917934|ref|XP_003052548.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733488|gb|EEU46835.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 426

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 77/416 (18%), Positives = 153/416 (36%), Gaps = 40/416 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F +   +EL+ L + V   T +E+                   + DK    PA   + ++
Sbjct: 41  FEAPSKEELDELRDRVQEFTRREITEEV-------------AAKTDKTNAFPA--EMWQK 85

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      D     +    QAH I    L   +        + S    + + L  +P
Sbjct: 86  LGEAGFLGITADEDVGGLAMGYQAHIIVMEELSRASGSIGLSYAAHSQLCVNQLQLNGSP 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P + +              +    L ++E   G+D+ ++ +  + +  G    
Sbjct: 146 EQKQKYLPGLIAG-------------TSVGALAMSESGAGSDVVSMRTTAKAVDGGYVLN 192

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E       +   L D    G    R  +K+G R + T E
Sbjct: 193 GSKMWITNGPDADVIVVYAKTEPDKASKGITAFLVDTKTEGFSCARKLDKMGMRGSNTGE 252

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N F     +LG +N     + +   L  L  +   +  M+ +L  A+ +  +R   
Sbjct: 253 LMFDNVFVPTENILGKINGGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQF 312

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWC 404
           G  +     ++  +AD+   + A+ A ++  A + DE    R+++ A A         + 
Sbjct: 313 GQPIAHNQFLQGKLADMYTKLQASRAYTYMTAKAVDENGLIRTQDCAGA-------ILYA 365

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + A     + ++ +GG GY+EE   +R  R++    I  G+     + +     K
Sbjct: 366 AERATECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 421


>gi|289739515|gb|ADD18505.1| isovaleryl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 423

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 140/375 (37%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK +  P      ++    G      +  F         H I    +   A   
Sbjct: 64  PFAKEIDKNDHFPELRNFWKKMGDLGFLGITAEPEFGGTGGSYLDHCIIMEEISRAAGGI 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+               GL ++E   
Sbjct: 124 ALSYGAHSNLCVNQLTKNATSEQKEKYLPKLCSGEH-------------IGGLAMSEPGA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           G+D+ ++  + ++  D         W  +  ++D  I+ A+   G      +   + + +
Sbjct: 171 GSDVVSMKLKAERKGDYFVLNGTKFWITNGSVADTLIVYAKTGTGTADKHSITAFIIETA 230

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +  +K+G R + T EL F +       +LG  N     +     +  L  A  
Sbjct: 231 SEGFSIAQKLDKLGMRGSPTCELVFQDLKVPAKNILGQENKGVYVLMSGLDIERLVLAAG 290

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+ ++  A  YA +R   G ++ +  +M+  +AD+   ++A  +  + +A + D  
Sbjct: 291 PVGLMQAAIDIAFEYAHQRKQKGQLIGEFQLMQGKMADMYTTLSACRSYLYSVARACDSG 350

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + S++             +C + A  V  EA++ +GG+GYI E S  R  R++    I 
Sbjct: 351 HNSSKD-------CAGVILYCAEKATQVALEAIQTLGGNGYINEYSTGRIMRDAKLYEIG 403

Query: 444 LGSGNAMVLDVLNLL 458
            G+       +   L
Sbjct: 404 AGTSEIRRWLIGRQL 418


>gi|218673846|ref|ZP_03523515.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 381

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 148/402 (36%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE          AR A  +   L          D+    P    L  +    GLH    
Sbjct: 6   LGETA-DAIRDTTARFAADHIAPL------AAEIDESNTFP--RQLWPQMGALGLHGITV 56

Query: 121 DRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + +    +P   +   PK+ 
Sbjct: 57  EEEFGGAGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWASPEQKRRHLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++  + ++  D         W  ++P 
Sbjct: 117 SGEH-------------VGSLAMSEAGAGSDVVSMRLRAERKGDRYILNGTKFWITNAPH 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++  ++ A+ +   G   +  L+ +    G    +  +K+G R + T EL F +      
Sbjct: 164 AEVLVVYAKTDPAAGPKGISALIIEKGMPGFSVSKKLSKLGMRGSDTAELVFEDCEVPAE 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +      V+ +   +  + A+++   +  M+  L   + Y R R   G  + D  +M+
Sbjct: 224 ALMGREGEGVKILMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + +A A  + +A + D  ++   +AA A         +  + A  V  EA+
Sbjct: 284 AKIADMYVALNSARAYVYSVARACDAGRTTRIDAAAA-------ILFASENAVKVSLEAI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 337 QALGGAGYTKEWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 378


>gi|119385631|ref|YP_916686.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376226|gb|ABL70990.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 375

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/398 (21%), Positives = 142/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  +     PG  + D+    P   A L      G    +         
Sbjct: 5   EEQEQIRDAARDFAR-ERLAPGAAQRDREHAFP--RAELTEMGELGFLGMLVPEEHGGSE 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A      A      +MS   +   +  L   T      + PK+ S E+    
Sbjct: 62  TGAVAYALALEEIAAADGACSTIMSVHSSVGCVPILRFGTDEQKARFLPKMASGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIML 246
                      G  LTE   G+D + + ++ ++  D  Y + G K F+SS  +    I+ 
Sbjct: 118 ---------IGGFALTEPHAGSDASNLRTKARREGDH-YVIDGAKQFISSGKNGKVVIVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G     +++K+G  S+ T  L F+     +    N   
Sbjct: 168 AVTDAAAGKKGISAFIVPTDTPGYEVVSVEHKLGQHSSDTCALAFTGMRVPV---ENRLG 224

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E  +I +       +  A  +V   R +   A+ YAR R   G  +I+   +   +A
Sbjct: 225 AEGEGYRIALSNLEGGRIGIAAQAVGMARGAYEAALAYARERITFGRPIIEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  +  R A   +  K    EA+ A       K +  +MA  V + A++  G
Sbjct: 285 DMATQIDAARLMVLRAAMLREAGKPCLTEASMA-------KLFASEMAERVCSAAIQLHG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+     L +   L
Sbjct: 338 GYGYLADYPVERIYRDVRVCQIYEGTSEVQRLVIARNL 375


>gi|255654848|ref|ZP_05400257.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-23m63]
 gi|296449591|ref|ZP_06891368.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296878086|ref|ZP_06902101.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
 gi|296261655|gb|EFH08473.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08]
 gi|296430839|gb|EFH16671.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07]
          Length = 380

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 131/377 (34%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P    L  +    G +       +         K+            +
Sbjct: 26  PIAAETDKTGIFP--RELFSKMAKIGFNGIGTPVEYSGSGGADIEKVIVVTEIAKKCAAS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S     A  +    T    K + P              M +        LTE   G
Sbjct: 84  AAILSIHTIYAQAILKFGTEEQKKKYLPM-------------MAEGGCVGAFALTEPNAG 130

Query: 209 TDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D A   +      +   Y L+G K F+S    +++ I+ A  +   G   +  ++ D  
Sbjct: 131 SDAARAATTAIIDEETDEYVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G    +++ K+G   + T EL F N        L            +  LD A + V 
Sbjct: 191 TPGFSIGKIEEKMGIHGSETAELIFDNCRVPKSNLLGKEGKGFN--IAMTCLDGARIGVG 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +AE     +I Y++ R   G  +     ++  IAD+A  + +A  L +  A+   
Sbjct: 249 AQAVGIAEGALEESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKA 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++EAA A       KY     A  V   A++  GG GY+++  + R YR++    
Sbjct: 309 RGEKHTKEAAMA-------KYNASHTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITE 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 362 IYEGTSEIHKVVISRAV 378


>gi|87120142|ref|ZP_01076038.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86164844|gb|EAQ66113.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 388

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMA 144
              P  E+ D+    P  + L ++    GL        F    +   AH I    +   +
Sbjct: 30  QIAPRAEQIDQDNLFP--NDLWKKFGEMGLLGITVSEEFGGAEMGYLAHVIAMEEISRAS 87

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    T +  + + PK+ S E+                L ++E
Sbjct: 88  ASVGLSYGAHSNLCVNQIYRNGTQKQKETYLPKLVSGEH-------------IGALAMSE 134

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++    +   D         W  + P ++ +++ A+ +   G   +   + +
Sbjct: 135 PNAGSDVVSLKLHARDEGDHYVLNGNKMWITNGPDANVYVIYAKTDLHAGSKGITAFIVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F +       +LG+LN     +        L  A
Sbjct: 195 RDSEGFTQAQKLDKLGMRGSNTCELVFQDCKVPKENILGELNGGVKVLMGGLDYERLVLA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+ ++  A+ Y R R   G  + +  +++  IAD+   + AA +  + +A S D
Sbjct: 255 GGPLGIMQAAMDVAVPYIRDRQQFGKAIGEFELVQGKIADMYTRMNAAKSYVYMVAMSAD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  +MA  +  +A++ +GG+GYI E    R  R++    
Sbjct: 315 RGETTRKDAAG-------VILYAAEMATQIALDAIQLLGGNGYINEYPTGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|77461391|ref|YP_350898.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385394|gb|ABA76907.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 601

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 87/489 (17%), Positives = 183/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G+ N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADGTVGTRNAVTCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   +     + YAR R  
Sbjct: 264 ATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFMTPIAKAFMTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   ++ G + +      ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEGNEAVKEFVAPLAALNKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|257483067|ref|ZP_05637108.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 592

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 171/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+++        +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLQDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA+ R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAQDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|254419280|ref|ZP_05033004.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185457|gb|EDX80433.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 389

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 134/362 (37%), Gaps = 24/362 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L       GLH    +  +  +      H +    +   +        + S    + +
Sbjct: 48  RELWPEMGELGLHGITVEEDYGGLGLGYLEHVVAMEEVSRASASIGLSYGAHSNLCVNQI 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   + + PK+ S E+                L ++E   G+D+ ++ ++  +  
Sbjct: 108 RRWGTPEQKRKYLPKLISGEH-------------VGALAMSEAGSGSDVMSMRTRADRKG 154

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++P +D  ++ A+ +   G       L +    G    +  +K+G R
Sbjct: 155 DRYVLNGTKFWITNAPHADTLVVYAKSDPDAGSKGCTAFLIEKGMKGFSVSKKLDKMGMR 214

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T EL F +        +G +    G +           A   +  M+ +L   + Y 
Sbjct: 215 GSDTAELVFEDCEVPEENIMGPVGGGAGVLMSGLDYERAVLAAGPLGIMQAALDVVLPYV 274

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  +    +M+  +AD+ + + +A A  + +A + D   +   +AA A ++A  
Sbjct: 275 RDRQQFGRPIGSFQLMQGKVADMYVALNSARAYVYSVARACDAGLTTRYDAAGAILLA-- 332

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 + A  V  EA++ +GG+GY +E  + R  R++    I  G+       +   L 
Sbjct: 333 -----SENAVKVTLEAVQALGGAGYTKEWPVERLVRDAKLYDIGAGTNEIRRFLIGRELL 387

Query: 460 KG 461
            G
Sbjct: 388 GG 389


>gi|149924251|ref|ZP_01912624.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149814876|gb|EDM74441.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 382

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 146/406 (35%), Gaps = 34/406 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   + + R A     +  +  P     DK   +P    L+      G      D 
Sbjct: 2   DFQLTEEHEAIRRTAREFAAR--SVAPIAAEIDKQARYP--KELVDEMGELGFMGIEVDP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +          + A           G +MS  +      +    +    + W   + S 
Sbjct: 58  DYGGSGMDPLSYVIAMEEISAVCASTGVIMSVNNSLVCDPLRKWGSHEQKQKWLEPLASG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   L+E   G+D AA  +   +  D         W  + P +D
Sbjct: 118 E-------------KLGCFMLSEPDAGSDAAAQKTVAVRDGDHYVITGVKNWITNGPQAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             I++   +   G   +   + D +  G+      +K+G R++ + ++ F++        
Sbjct: 165 TGILMLMTDKAKGHRGISAFIIDMNGEGVSRGPKDDKLGIRASHSCQIFFTDHRVHESQR 224

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
           L       +  K+ +  LD   + ++   + +A      A  YA  R   G  + D   +
Sbjct: 225 LG---NEGDGFKVAMSTLDCGRIGIAAQALGIARGAFEAAARYATERKTFGKAIADHQAI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A +I AA  L++R A      K  S E+A  ++MA        ++A  V   A
Sbjct: 282 SFMLADMATEIDAARLLTYRAAALKAAGKRHSVESAMCKLMA-------SEVANKVAKNA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  GG+GY+ E  + R YR++    I  G+     + + + L + 
Sbjct: 335 VQIFGGNGYVSEYPVERAYRDAKITEIYEGTSEIQRVVIASNLIRA 380


>gi|78060442|ref|YP_367017.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964992|gb|ABB06373.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 383

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 128/358 (35%), Gaps = 26/358 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        F  +      ++ A      A      L+  +V   S  +    TP  
Sbjct: 46  AMGLFGLTIPERFGGLELTMEEEVLAVFELCQASPVFRSLLGTTVGIGSQGILFDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E             +     LTE   G+D A++ +   +  D       
Sbjct: 106 QERYLPRLATGE-------------LIASFALTEPESGSDAASLRTTAIRDGDDYVVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   +   + D    G+ + +   K+G +   T ++
Sbjct: 153 KRFITNAPHAGIFTLMARTNPEDKGSGGISAFIVDAKTPGISFGKRDKKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        +      G    MK+L    +  A + V+     L+ A+ YA  R   
Sbjct: 213 IFDNVRVPAANLIGGKEGQGFKTAMKVLDKGRIHIAAVCVAVAERMLSMALSYAMERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D  +++  +AD   +I AA  +    A   D     S E       A   K +  
Sbjct: 273 GKPIADFQLVQAMLADSKAEIYAARCMVVDAARRRDAKLPVSTE-------ASCAKLFAS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +M   V   A++  GG+GY+ E  I R YR+     I  G+     L +   + +   
Sbjct: 326 EMCGRVADRAVQIFGGAGYMAEYGIERFYRDVRLFRIYEGTTQIQQLVIARNMIRDAQ 383


>gi|269964390|ref|ZP_06178632.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269830887|gb|EEZ85104.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPHAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKAEVAQQFSADLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVRDGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADCEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|255036761|ref|YP_003087382.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254949517|gb|ACT94217.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 388

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 136/371 (36%), Gaps = 26/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLM 152
           WD  +  P    L R     GL   +   +          +      L  +    A  + 
Sbjct: 39  WDDQQHFP--KELFRSMGELGLMGMLIPEALGGAGLGYREYVTAIIELAKVDPSVALSMA 96

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +    + + +      H+ + P + S              ++    GLTE   G+D  
Sbjct: 97  AHNSLCTNHIYMFGNAAQHQKYLPGLASG-------------TLVGAWGLTEPNTGSDAG 143

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +   +  D         +  +   +D  +++ +             + D    G   
Sbjct: 144 NMRTVAVRDGDDWVINGSKNFITNGKSADVLVVMTRTGEPGDKHGATAFVLDADTPGFSA 203

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            R ++K+G R++ TVEL F +        L  +  G ++ +K+L    +  A + V    
Sbjct: 204 GRKEDKLGMRASETVELLFQDCRIPDSQRLGEIGDGFIQSLKVLDGGRISIAALGVGTAF 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ Y++ R   G  + D   +   +AD+  D  A++ L+F  A+  D  +  +  
Sbjct: 264 GAYEAALAYSKERKQFGKAICDFQAIAFKLADMYTDAQASSLLTFHAASLKDAGEKVTLA 323

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           +        + KY   + A  V  +A++  GG G++++    + YR+S   +I  G+   
Sbjct: 324 S-------SVAKYHSSETAVRVANDAVQIFGGYGFVKDYPAEKFYRDSKLCTIGEGTSEI 376

Query: 450 MVLDVLNLLEK 460
             + +   + +
Sbjct: 377 QKMVISKEILR 387


>gi|328543424|ref|YP_004303533.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413169|gb|ADZ70232.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 390

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 141/377 (37%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P  ER D+ ++ P    L       GLH    + ++         H I    +   +
Sbjct: 31  RIAPLAERIDREDWFP--RELWPEMGELGLHGITVEEAWGGAGLGYLEHCIAMEEVSRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         K +  K+ + E+                L ++E
Sbjct: 89  ASIGLSYGAHSNLCVNQLRRWGNDDQKKRYLGKLITGEH-------------VGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  + P +D  I+ A+ + + G   +   L +
Sbjct: 136 PGAGSDVVSMKLRAEKKGDRYVLNGSKMWITNGPCADTLIVYAKTDPQAGPKGITAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L      V  +   +  + A+++
Sbjct: 196 KGFAGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGSVGKGVNVLMSGLDYERAVLA 255

Query: 325 VSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                 M+ ++  AI Y   R   G  +    +++  IAD+ + + A+ A  + +A + D
Sbjct: 256 AGAVGIMQAAMDVAIPYVHERQQFGQPIGTFQLVQGKIADMYVAMNASRAYVYAVAQACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  E+AA A         +  + A  +  +A++ +GG+GYI +    R  R++    
Sbjct: 316 RGETTREDAAGA-------ILYAAENATKIALDAIQLLGGNGYINDYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 369 IGAGTSEIRRMLIGREI 385


>gi|307545521|ref|YP_003898000.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581]
 gi|307217545|emb|CBV42815.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581]
          Length = 389

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P    L ++    GL                 AH I    +   +   
Sbjct: 33  PRAAEIDAKNEFPD--DLWQKFGDMGLLGITVPEEDGGSGMGYLAHCIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + + L    +    + P + S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIKLNGNAQQKARYLPGLISGEH-------------VGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLKAEKRGDRYVLNGNKMWITNGPDADVLVVYAKTDPDAGSKGITAFIIEKGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F +       +LG++N     +           A   
Sbjct: 198 AGFSTAQKLDKLGMRGSNTCELVFEDCEVPEENVLGEVNKGARVLMSGLDFERTVLAAGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ ++   + Y   R   G  + +  +++  +AD+   + A  A  + +A + D  +
Sbjct: 258 IGIMQAAMDVVVPYLHERKQFGQSIGEFQLVQGKVADMYTTLNACRAYLYAVAGACDRGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +C + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TSRKDAAG-------VILYCAEKATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   +
Sbjct: 371 GTSEIRRMLIGREI 384


>gi|330812188|ref|YP_004356650.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380296|gb|AEA71646.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 601

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 183/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDIEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    L++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADGSIGQRNAVSCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   +     + YAR R  
Sbjct: 264 ATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFMTPIAKAFMTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   G+ G + +    + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQGNEGNEAVKEFVEPLAALNKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|296389023|ref|ZP_06878498.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 375

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 138/393 (35%), Gaps = 29/393 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +++AR   +   +L    P    WD+    PA    +R     G    +    +    
Sbjct: 9   QIRDMARQ--FAQERLK---PFAADWDREHRFPA--EAIREMADLGFLGMLVPEEWGGAQ 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                   A             +MS   +   M               K  S E      
Sbjct: 62  TGHLAYAMALEEIAAGDGACSTIMSVHNSVGCMPIH------------KFGSAEQKERFL 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ + S+     LTE + G+D + + ++ ++  D        ++  S   +   I+ A 
Sbjct: 110 RPLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGTKQFITSGSHAGMVIVFAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
            +   G   +   +      G    R+++K+G  ++ T +L F++        LG+    
Sbjct: 170 TDPDAGKRGISAFIVPTDTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLGEEGEG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       +  A  +V   R +   A  YA  R   G  +I+   +   +AD+A  
Sbjct: 230 YRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA A  +    A+  +       EA+ A       K +  +MA  V + A++ +GG GY+
Sbjct: 290 IAVARQMVHHAASLREAGLPCLTEASMA-------KLFASEMAEEVCSAAIQTLGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  + R YR+     I  G+ +   L +   L
Sbjct: 343 KDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|295085068|emb|CBK66591.1| Acyl-CoA dehydrogenases [Bacteroides xylanisolvens XB1A]
          Length = 568

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 171/446 (38%), Gaps = 47/446 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRKFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +     P  H  + P+I   E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +   + F T+      + L S  KK+    + 
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFKA 488

Query: 490 SISLCKEDKGL------ARFLTEKIA 509
           S +  KE +        AR L E  A
Sbjct: 489 STNAVKEVQDQELLDFTARKLVEMAA 514


>gi|241661759|ref|YP_002980119.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863786|gb|ACS61447.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 393

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 138/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R A  +  Q     P     D+ +  P      R+    G+        +   
Sbjct: 12  GEDIEMLRSAVRDWAQ-GELAPRAGEIDRTDQFPM--DAWRKMGELGVLGITVAEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 69  NMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKTKYLPKLVSGEW--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +   D         W  + P  D  ++ 
Sbjct: 126 ----------VGALAMSEPNAGSDVVSMKLRAELKGDRYVLNGTKMWITNGPDCDVLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   +   + +    G    +  +K+G R + T EL F N    +   L    
Sbjct: 176 AKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFENVEVPVENILGQEN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A++S   +  M+  +     Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGTKVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKMADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  A  + +  + D      +     R        +  + A  +  EA++ +GG+G
Sbjct: 296 TTLQACRAYLYTVGKNLDS--LGRDHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEFPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|50084774|ref|YP_046284.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           sp. ADP1]
 gi|49530750|emb|CAG68462.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           sp. ADP1]
          Length = 375

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 137/370 (37%), Gaps = 26/370 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WD+    P  H +++     GL   +    +            A      A      +M
Sbjct: 28  EWDQKHQFP--HDIIKEMGQLGLMGMLVPEVWGGSDTGYIAYATAIEAIASADGACSTIM 85

Query: 153 SPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S   +   M  L     +    +               P+ +  +     LTE + GTD 
Sbjct: 86  SVHNSVVCMPILKYGNDQQKHQFLI-------------PLAQGQMLGAFALTEPQAGTDA 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           + + ++  K  D        ++  S+  +D  I+ A      G   +   L      G  
Sbjct: 133 SNLKTKAIKDGDDYIITGSKQFITSAQHADVVIVFAVTNPDAGKKGISAFLVPTDTAGYS 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             RL+ K+G  ++ T +++         +LLG+         D      +  A  SV   
Sbjct: 193 VVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGGRIGIAAQSVGMA 252

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L  AI YA+ R   G  +I+   +   +AD+A  +A A  + +  A+  +  ++   
Sbjct: 253 QAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHAASLRESNQASLV 312

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA+ A       K +  +MA  V + A++ +GG GY+++  + + YR+     I  G+ +
Sbjct: 313 EASMA-------KLFASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSD 365

Query: 449 AMVLDVLNLL 458
              + +   L
Sbjct: 366 VQRIVISRSL 375


>gi|23013421|ref|ZP_00053318.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 383

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 127/355 (35%), Gaps = 26/355 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +      ++  A  +   +        + +   +  + +  T   
Sbjct: 46  ELGLFGLSIPEEYGGLGLTMEEEVLCAFEIGQTSPAFRSIFGTNNGIGSQGIIIDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E             +     LTE   G+D A++ +  +K  D       
Sbjct: 106 KRKYLPRLATGE-------------LIASFALTEPNAGSDAASLRTTARKDGDHYIVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   +   + +    GL   ++  K+G +   T ++
Sbjct: 153 KRFITNAPEASIFTLMARTNPENKGAGGISAFIVEADSPGLSLGKIDKKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F +        +      G    MK+L    L  +   V      + +++ YA  R   
Sbjct: 213 IFEDVRVPAANIIGGVEGQGFKTAMKVLDRGRLHISATCVGVSERLIRDSVKYAAERVQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD   +  AA  +    A   D+  + S EAA         K +  
Sbjct: 273 GKPIGEFQLVQAMLADSKTEAYAARCMVLDAARKKDQGINVSTEAA-------CCKMFAS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +    +   A++  GG+GYI +  I R YR+     I  G+     L +   + K
Sbjct: 326 EAVGRIADRAVQVHGGAGYIADYGIERFYRDVRLFRIYEGTTQIQQLVIARNMLK 380


>gi|114569386|ref|YP_756066.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339848|gb|ABI65128.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 585

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/502 (20%), Positives = 192/502 (38%), Gaps = 54/502 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE---RWDKVEF 99
           L  + A                +      E A++A      L+  G         DKV  
Sbjct: 14  LEEVAAVEGLKATGAFPDFSADLTVAILDEAAKLAENVLAPLNKVGDAEHCKLADDKVTT 73

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              +     + +  G     +      +   +A  +    +   + L  G     +  + 
Sbjct: 74  PTGFPEAYAQFVEGGWQGLQFSTDNGGMGLPRALGVTVLEMIQGSNLSFGLGPMLTYGAI 133

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      + PK+ + E+  T             + LTE   G+D+ A+ ++ +
Sbjct: 134 EALIEHGTDEQKAMYLPKLITGEWSGT-------------MNLTEPSAGSDVGALRTKAE 180

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPN 268
              DG + +SG K F++    D       ++LA+  G       +  F+VP++L DGS N
Sbjct: 181 PNPDGSWAISGQKIFITWGDHDCAENIIHLVLARTPGSPDGTKGISLFIVPKVLPDGSAN 240

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            L    L++K+G   + T  +E++   G+L+G  N     +  M     L+  +  V   
Sbjct: 241 SLKAIGLEHKLGIHGSPTCTMEYAGATGWLIGGENAGMRCMFTMMNSARLNVGVQGVGIA 300

Query: 329 RVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADI------ALDIAAATALS 373
             +  +A+ YA  R     I         +I  P +KR ++ +      A  I  + A++
Sbjct: 301 ERAYQQALAYASDRKQGRAIDAEGPAPHAIIHHPDIKRTLSLMKAKIAAARAICVSCAVA 360

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             LA   DE + ++       ++ PI K W   +   V +  ++  GG GYIEE   A+H
Sbjct: 361 ADLAYHGDEDEEKAAAKRREELLTPIAKAWSTDVGVEVASANIQVHGGMGYIEETGAAQH 420

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS-------SGKKVI 484
            R++    I  G+     +D++   L       F++L++ ++Q + S           + 
Sbjct: 421 LRDARITPIYEGTNAIQAIDLVGRKLSMADGAAFDELYADIDQTIESCLTSSHPDLPPLG 480

Query: 485 TILRDSISLCKEDKGLARFLTE 506
             LRDS+   +E    A +L E
Sbjct: 481 ERLRDSLEALQEA---ADWLAE 499


>gi|311103339|ref|YP_003976192.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758028|gb|ADP13477.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 392

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 143/400 (35%), Gaps = 22/400 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A  N  Q     P     D+ +  P    L R+    G+     D  +   
Sbjct: 11  GEDLDMLRDAVRNFAQ-TEIAPRAAEVDRSDQFPM--DLWRKFGELGVLGMTADEEYGGA 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 68  KMGYLAHMIVMEEISRASASVGLSYGAHSNLCVNQINRNGTAAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADKKGDRYVLNGTKMWITNGPDADTLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPEAHQRGITAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             V+ +   +  + A++S   V  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 AGVKVLMSGLDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  +++  + D  +  +E     R        +  + A  +  E ++ +GG+G
Sbjct: 295 TTLQASRAFCYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R +R++    I  G+     + +   L   T 
Sbjct: 353 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETA 392


>gi|115655541|ref|XP_796528.2| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
 gi|115969289|ref|XP_001195179.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
          Length = 461

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 146/378 (38%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P     DK +         +++   G H       +  V      ++        A    
Sbjct: 101 PIAAELDKTDNFVGMREFWKKAGEMGFHGITAPVEYGGVGGSYMDQVLILEEISRASASV 160

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + S    + +    +    + + P +              +      L ++E   
Sbjct: 161 ALSMGAHSNLCINQMVRNASAEQKEKYLPGLI-------------RGDQIGALAMSESGS 207

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-LVPRLLEDG 265
           G+D+ ++  + +K   G Y L+G+K+++++   +D  ++ A+ +        V   + + 
Sbjct: 208 GSDVLSMRLKAEKKG-GYYVLNGNKFWITNGCDADVLLVYAKTDLSAEAKDGVTTFIIEK 266

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R ++T EL F +    +   LG +N     +     +  L  A 
Sbjct: 267 GMEGFRSAQKVDKLGMRGSSTCELVFEDCKVPVENVLGGVNRGVNILMSGLNIERLIIAT 326

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  +  AI Y  +R   G  + +  +M+  +AD+   + A  +  + +A + D 
Sbjct: 327 APIGIMQACMDVAIPYVHQRKQFGRPIGEFQLMQGKMADMYSRLNACRSYVYNVARAMDR 386

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++ +A           +  + A  V  +A++C+GG+GYI +  + R  R++  N I
Sbjct: 387 GHITNKNSA-------AVALFAAENATQVALDAIQCLGGNGYIFDYPVGRFLRDAKLNEI 439

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+   + L +   L +
Sbjct: 440 GAGTSEIIRLIIGRALNE 457


>gi|332528868|ref|ZP_08404842.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332041727|gb|EGI78079.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 602

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 87/454 (19%), Positives = 156/454 (34%), Gaps = 64/454 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + I  G      D  F          +      ++        M P 
Sbjct: 74  EVTTPKGFKEAYAQYIEGGWAALSCDPEFGGQGLP--FVLNQCFYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +   L    T    K + PK+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYECLQAHGTEAQKKQFLPKLVSGEWLGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED--- 264
           + ++ +  +DG Y ++G K F+SS  +D       ++LA+  +   G   +         
Sbjct: 179 LRTKAEPQADGTYKINGTKIFISSGDNDFTENIVHLVLARLPDAPKGSKGISLFAVSKYQ 238

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  NG+    L++K+G   NAT ++   N  G L+G  +     +  M     
Sbjct: 239 LKADGSLGESNGIYCGGLEHKMGIHGNATCQMVLDNAVGTLVGQPHKGLQAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P +++ +      
Sbjct: 299 LGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKEADPIIVHPDVRKMLLTAKAY 358

Query: 366 IAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECI 419
                AL+   A   D+     +E           ++ PI K +             +  
Sbjct: 359 AEGGRALACYCALLLDQHLHHPDEQVRQDSDELLALLTPIIKAFLTDNGFQATVMCQQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GYI+E  + +  R++  N I  G+     LD+L     G N             G++
Sbjct: 419 GGHGYIKEWGMEQFVRDARINMIYEGTNTVQSLDLLGRKVLGNN-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            KK   I+   I     ++ ++ F++    LA  
Sbjct: 466 LKKFGKIVGALIEEEGVNEKMSEFISPLAVLAEQ 499


>gi|153007873|ref|YP_001369088.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559761|gb|ABS13259.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 592

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/546 (16%), Positives = 188/546 (34%), Gaps = 58/546 (10%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLH-AYGPGGERW-DKVEFH-PAWHALLRRSIHDGLHC 117
               + +   +E  + A+     L       G    D V    P W  L R  I  G + 
Sbjct: 31  FSADLAAAILEEAGKFASERVEPLRITGDKHGATVKDGVVTTAPGWKELYRDWIEGGWNS 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +          +  + ++    L      + ++ +   V    +  +   +  K
Sbjct: 91  LTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEAVEKHASKELKDIYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   G+D+  + ++ ++  DG Y + G K F++ 
Sbjct: 151 LISGEWMGT-------------MNLTEPHAGSDLGVMRTRAERAGDGSYRIFGQKIFITY 197

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+ L +     G  N L    L++K+G 
Sbjct: 198 GEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNDDGSLGRRNDLFCSGLEHKMGI 257

Query: 282 RSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            ++ T  + + +           G+L+G+ N     +  M     L   I  V     + 
Sbjct: 258 HASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAY 317

Query: 333 AEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
            +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D 
Sbjct: 318 QQALAYAKERKQGRAIGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYSCAHAIDM 377

Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E   +   +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R++
Sbjct: 378 SHATEGADQQFWSDRAGLLTPLAKSFATDAGVDVASLGIQIHGGMGFIEETGAAQLLRDA 437

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               I  G+       L    L        +   + L+ D   +       L ++ +   
Sbjct: 438 RITPIYEGTNGIQAIDLVARKLPLGHGEHIKGFLAELQDDADKAAASNRPELGETGARLS 497

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           +    AR  T+ +  A +   L  A         L +      +     L    +   ++
Sbjct: 498 KAINEAREATDWLQKAVAEGQLEAALAGASPYQRLLSLVSGGAYLARAALADDDSGRAVL 557

Query: 556 DSLYLD 561
              + +
Sbjct: 558 SRFFAE 563


>gi|168008655|ref|XP_001757022.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691893|gb|EDQ78253.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 365

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 145/377 (38%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ +  P    +LR++   G                +A           A +  
Sbjct: 8   PFAAQWDEQKHFPV--EVLRKAAGLGFGGLYCGHDVGGSGLSRADGAVIFEALAYADVST 65

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     AS++    T    +D+  ++ S               +     LTE   G
Sbjct: 66  TAYLTIHNMCASLIERYGTEDQRQDFLRELTSM-------------DLLASYCLTEPNSG 112

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D A++ +  ++ +    Y L+G K F+S   + D ++++A+  G  G   +     D  
Sbjct: 113 SDAASLQTTARRQAGSTDYILNGEKAFISGGGAADVYLVMART-GEAGPKGISCFYVDKD 171

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL + R ++K+G RS  T  +   +       L+G                 ++ A  
Sbjct: 172 SKGLSFGRQEDKLGWRSQPTSSVILDDVRVPERCLIGKEGEGFTIAMSALDGGRINIATC 231

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV G +  +  A  Y   R   G  +ID    +  +AD+   + A+  L    A + D  
Sbjct: 232 SVGGAQFCVDAAQGYVSTRKQFGKAIIDFQNTQFKLADMLTKVQASRCLVLNAATALDS- 290

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                +A +A   A + K +       V  +A++  GG GY+++ ++ R+ R+   ++IL
Sbjct: 291 -----KAPWASASAAMAKRFATDECYNVANDALQLHGGYGYLKDYAVERYVRDLRVHTIL 345

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   M + +   + K
Sbjct: 346 EGTNEIMRVVMARHMIK 362


>gi|116050496|ref|YP_790685.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585717|gb|ABJ11732.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 375

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 139/393 (35%), Gaps = 29/393 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +++AR   +   +L    P    WD+    PA    +R     G    +    +    
Sbjct: 9   QIRDMARQ--FAQERLK---PFAADWDREHRFPA--EAIREMADLGFLGMLVPEEWGGAQ 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                   A             +MS   +   M               K  S E      
Sbjct: 62  TGHLAYAMALEEIAAGDGACSTIMSVHNSVGCMPIH------------KFGSAEQKERFL 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ + S+     LTE + G+D + + ++ ++  D        ++  S   +   I+ A 
Sbjct: 110 RPLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGAKQFITSGSHAGMVIVFAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
            +   G   +   +      G    R+++K+G  ++ T +L F++        LG+    
Sbjct: 170 TDPDAGKRGISAFIVPTDTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLGEEGEG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       +  A  +V   R +   A  YA  R   G  +I+   +   +AD+A  
Sbjct: 230 YRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA A  +    A+  +       EA+ A       K +  +MA  V + A++ +GG GY+
Sbjct: 290 IAVARQMVHHAASLREAGLPCLTEASMA-------KLFASEMAEEVCSAAIQTLGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  + R YR+     I  G+ +   L ++  L
Sbjct: 343 KDFPVERIYRDVRVCQIYEGTSDVQRLVIVRSL 375


>gi|299770613|ref|YP_003732639.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700701|gb|ADI91266.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 600

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/504 (17%), Positives = 179/504 (35%), Gaps = 62/504 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    +  A         ++      G   ++  V     +    ++    G     
Sbjct: 37  RELIDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGFKEAYQKYAELGFTSLT 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  +         +I  + +   +          S  +   +    T +  + +  K+ 
Sbjct: 97  ADPEYGGQGLPTLLRIAVSEMLCGSNWAWAMYPGLSHGAMRTIEHHGTEQQKQKFLAKLI 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +   DG Y ++G K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGE 203

Query: 240 SD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SPNGLCYQRLKNKIGNRS 283
            D       I+LA++         +  F+VP+     DG     N +    +++K+G   
Sbjct: 204 HDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  L F    G+L+G  N     +        + +A+  ++   +S   A+ YA+ R 
Sbjct: 264 NATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
                            +I  P ++  +           AL++ LA   D      + + 
Sbjct: 324 AMRSLSGPKYPEKNADPIIVHPAVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQ 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +         + PI K +  +         ++  GG G+I E  + +  R++  +++  G
Sbjct: 384 QKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEG 443

Query: 446 SGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC 494
           +     LD+L          LL+  T+L +Q     +  + L    +K+  + +  +SL 
Sbjct: 444 TTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIGQQQSSETLKPYLEKLAELKQQWLSLT 503

Query: 495 KEDKGLARFLTEKIALASSAAALY 518
           K     A+   E+I  A+S   LY
Sbjct: 504 KTIAEKAKHNPEEIG-AASVDYLY 526


>gi|292655298|ref|YP_003535195.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370626|gb|ADE02853.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 380

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 145/377 (38%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ +  PA   L+      GL    +   +        ++ I    +   +   
Sbjct: 26  PRAAEIDETDEFPA--DLVAEMGQLGLMGMPFPEEYGGAGLDYHSYAIGLEEISRGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+         + +               P+ + +      L+E   
Sbjct: 84  GTIVAAHTSLAGNMLYEFGNEEQKQTYL-------------TPLNEGTDIGAFALSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+ +   K  D      G  W  +  ++D  ++ A+ +   G   +   +     
Sbjct: 131 GSDVPAMETTAVKDGDEYVVDGGKLWISNGSVADTVVVFAKTDPDAGNKGISSFVVRPEV 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIM 323
            +G   +  ++K+G++   T EL F +        L     G V+ +K      +  A  
Sbjct: 191 DDGFVVEGTEHKLGDKGCPTAELRFDDMRIPEDRLLGGEGDGFVQALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +L +A+ YA  R      + D   +K  +AD+   + AAT L  + A+     
Sbjct: 251 SIGIARAALDDAVTYAGEREQFDQPIGDFQAIKHELADMDTKVQAATLLMHKAADLKMRD 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  +EAA A       K +  +++  V  E ++  GG GY ++ +  R+YR++  N I 
Sbjct: 311 ETFIKEAAQA-------KLYASEISREVANEGIQIHGGYGYTKDFAAERYYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   +   + + L+K
Sbjct: 364 EGTSEILRNTIGDWLQK 380


>gi|127512598|ref|YP_001093795.1| butyryl-CoA dehydrogenase [Shewanella loihica PV-4]
 gi|126637893|gb|ABO23536.1| Butyryl-CoA dehydrogenase [Shewanella loihica PV-4]
          Length = 385

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 145/399 (36%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++ A +A           P   +WD+    P    +++++   G        
Sbjct: 2   DFNLNEDQRQFAELATQFA--QEELAPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +           M       +++    +  MV    +  +  +W+  + +  
Sbjct: 58  SEGGMGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMVTSFGSQTLRDEWSEALTTG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       +      LTE   G+D A++ ++  +  D  Y +SG K F+S   S  
Sbjct: 117 ------------NKLASYCLTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGSTE 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +  +       G+ Y + ++K+G  +  T E+ F      +   L
Sbjct: 164 LLVVMCRTGDAGPKGISAIAIPADAAGISYGKAEDKMGWNAQPTREITFDKVRVPVTNLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  SV   + +L  A  Y   R   G  +     ++  +
Sbjct: 224 GEEGQGFTFAMKGLDGGRINIATCSVGTAQAALERAQQYMNERQQFGKPIAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A   D           A     + K +   +   V   A++  
Sbjct: 284 ADMATELVAARQMVRLAAFKLDSGDPE------ATAYCAMAKRFATDVGFNVCDSALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI E  + RH+R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|262380864|ref|ZP_06074015.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|262297499|gb|EEY85417.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 600

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/527 (17%), Positives = 183/527 (34%), Gaps = 70/527 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E +   ++    +  A         L+      G  W D V   P  +    ++ I  G 
Sbjct: 33  ENVSRDLVDQYLEAAADFCENELSPLNQIGDREGCSWNDGVVTTPTGFKEAYQKYIELGF 92

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +  +       +  I  + +   +    G     S  +   +    +    + + 
Sbjct: 93  PSLSAEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSDEQKETYL 152

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+
Sbjct: 153 PKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFI 199

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G       +  F+VP+   +     G  N +    +++K+
Sbjct: 200 SAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEHKM 259

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + F    G+L+G  N     +        + +A+  ++    +   +I YA
Sbjct: 260 GIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIVYA 319

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P ++  +           AL + LA   D  +  +
Sbjct: 320 KDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEKGA 379

Query: 388 EEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            E           ++ PI K +  +       + ++  GG G+I E  + +  R++    
Sbjct: 380 TEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRIAC 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD+L     GT         + +D      K     +D+  L +  + LA
Sbjct: 440 LYEGTTEIQALDLLGRKVLGTQ------GAMLKDFTKIIHKFAEANKDNAELAEFIEPLA 493

Query: 502 RF------LTEKIAL--------ASSAAALYRAGMNDIADVFLENRF 534
           +       LT +I +          +AA  Y      +   +L  R 
Sbjct: 494 KLNKEWGELTMQIGMKAMQNPDEVGAAAVDYMYFSGYVTLAYLWARM 540


>gi|239835144|ref|ZP_04683471.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821283|gb|EEQ92853.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 375

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 140/397 (35%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A     Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARQFAQ-ERLAPGAAARDREHAFP--RAELSEMGELGFLGMLVSEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   +  L   T    + + PK+ S E+    
Sbjct: 62  LGTVAYALALEEIAAGDGACSTIVSVHSSVGCVPILRFGTEEQKQRFLPKMASGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ ++  D        ++  S       I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARRDGDHYVIDGSKQFITSGKNGSVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPSAGKKGISAFIVPTDTPGYEVVSVEHKLGQHSSDTCALAFTNMRIPV---ENRLGE 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  L+   + ++   V L       A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGQGYKIALANLEGGRIGIAAQSVGLARAAFEAARAYARERVTFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATKIEAARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|209515151|ref|ZP_03264019.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504405|gb|EEA04393.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 393

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 70/409 (17%), Positives = 147/409 (35%), Gaps = 39/409 (9%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +E+E+L + V S  A+E+A              P     D+ +  P    L R+  + G+
Sbjct: 13  EEIEMLRDSVASFAAKEIA--------------PRAGEIDRTDQFPM--DLWRKFGNLGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    T    + +
Sbjct: 57  LGMTVSEEYGGANMGYTAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGTEAQKRKY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  + +K  D         W 
Sbjct: 117 LPKLVSGEH-------------VGALAMSEPNAGSDVVSMKLRAEKKGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +       +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTDPEANSRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGIL 349
                  L    G V+ +  +  LD     ++G    +  A     + Y   R   G  +
Sbjct: 224 EVPEENILGQLNGGVKVL--MSGLDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSI 281

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +++  +AD+   + A  A  + +    D     ++     R        +  + A 
Sbjct: 282 GEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT--LGNDHVRQVRKDCAGVILYTAEKAT 339

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 340 WMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|187927237|ref|YP_001897724.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780063|ref|ZP_07674816.1| isovaleryl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724127|gb|ACD25292.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921233|gb|EFP66877.1| isovaleryl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 393

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 138/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R A  +  Q     P     D+ +  P      R+    G+        +   
Sbjct: 12  GEDIEMLRSAVRDWAQ-GELAPRAGEIDRTDQFPM--DAWRKMGELGVLGITVAEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 69  NMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKAKYLPKLVSGEW--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +   D         W  + P  D  ++ 
Sbjct: 126 ----------VGALAMSEPNAGSDVVSMKLRAELKGDRYVLNGTKMWITNGPDCDVLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   +   + +    G    +  +K+G R + T EL F N    +   L    
Sbjct: 176 AKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFENVEVPVENILGQEN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A++S   +  M+  +     Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGTKVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKMADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  A  + +  + D      +     R        +  + A  +  EA++ +GG+G
Sbjct: 296 TTLQACRAYLYTVGKNLDS--LGRDHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEFPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|332969068|gb|EGK08107.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 395

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 138/380 (36%), Gaps = 20/380 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D  +  P    L ++    GLH       +  V +   AH I    +   +   
Sbjct: 31  PRAAEIDSSDEFPM--DLWQKMGDLGLHGITVPEEYGGVNMGYMAHMIAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGSEAQKQKFLPKLISGEF-------------VGALAMSEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +    G        W  + P +D  ++ A+    +G   +   L +   
Sbjct: 136 GSDVTSMKLRAEAKDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGPKGITAFLVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T E+ F+N F      +      V+ +   +  + A+++   
Sbjct: 196 EGFGTAQKLDKLGMRGSHTGEMTFNNVFVPEENIMGGLNNGVQVLMSGLDYERAVLAAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   I Y   R   G  + +  +++  +AD+   + A  +  + +  + D   
Sbjct: 256 VGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAGRSFLYTVGKNLDLLD 315

Query: 385 SRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            R    +   R        WC + A  +  E ++  GG+GY  E  + R +R++    I 
Sbjct: 316 QRGAGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYPLGRFWRDAKLYEIG 375

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     + +   L   T 
Sbjct: 376 AGTSEIRRMLIGRELFNETK 395


>gi|159043390|ref|YP_001532184.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911150|gb|ABV92583.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 382

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 140/381 (36%), Gaps = 33/381 (8%)

Query: 87  YGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           + P  ERW D+ E       + +++   GL C     ++        H+         A 
Sbjct: 26  WAPHFERWRDQGEMD---REIWQQAGELGLLCPSVPEAYGGPGGDFGHEAAILIEIARAN 82

Query: 146 LEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           L A        S   A  +    +    + W PK+ S E                 L +T
Sbjct: 83  LSAWGAGHGIHSGIVAHYILAYGSEEQKQKWLPKMVSGEM-------------VGALAMT 129

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLL 262
           E   G+D+  I ++  K  +G Y LSG K F+++      I++A + +   G   V  ++
Sbjct: 130 EPGAGSDLQGIKTRAVKDGNG-YRLSGSKIFITNGQHANLIVVAAKTDPSAGAKGVSLVV 188

Query: 263 -EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIY 317
            E     G    R  +K+G  ++ T EL F N        L G++      +        
Sbjct: 189 LETEGAEGFSRGRNLHKVGMHASDTSELFFDNVAIPPENLLGGEVGKGFYQMMTQLPQER 248

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A  +V  M  ++   + YA+ R   GG ++     +  +A+       A A      
Sbjct: 249 LIIAAGAVGAMEGAVERTVAYAKERQAFGGPILQFQNTRFKLAECQTKTTVARAFLNECM 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E K   E+AA A       KYW       VI E ++  GG GY+ E  IA+ + ++
Sbjct: 309 AEHLEGKLSVEKAAMA-------KYWITDTQGEVIDECVQLHGGYGYMAEYDIAQMWSDA 361

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M   +   L
Sbjct: 362 RVQRIYGGTNEIMKELIGRAL 382


>gi|83854767|ref|ZP_00948297.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842610|gb|EAP81777.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
          Length = 600

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/541 (17%), Positives = 191/541 (35%), Gaps = 81/541 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGL 115
           + L     S   +E  ++ +     L+A     G R +  V + P  +     +    G 
Sbjct: 37  DELEADFTSAILEEAGKLTSEVLAPLNAVGDQEGCRLENGVVYTPKGFKDAFAKVKEGGW 96

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +               ++  +          +  +AS +    +      + 
Sbjct: 97  TGLDMPEQYGGQNMPYILGTAVGEMFSASNQAFTMYQGLTHGAASAILAHGSDAQKDTYL 156

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + S E+  T             + LTE   GTD+  + ++     DG Y ++G K F+
Sbjct: 157 PNMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQKIFI 203

Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           SS   D       ++LA++EG       V  F+VP+ +       G  N +    ++ K+
Sbjct: 204 SSGEHDMADNIIHLVLAKIEGGPEGIKGVSLFIVPKFMVKEDGSLGERNAVSVGSIEEKM 263

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + +    G+LLGD +     +  M     +   +  ++   V+   A+ YA
Sbjct: 264 GIHGNSTCVMNYDGAVGYLLGDEHKGMRAMFTMMNEARVGVGMQGLAQADVAYQNALAYA 323

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  LI  P ++R++ +    +  A A     A+  D A    
Sbjct: 324 KDRLQGRAVTGTEHPDKPADPLIVHPDIRRSLMEQKSFVEGARAFILWGASLIDAAHRAD 383

Query: 388 EEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++ A     +M P+ K +   +   +  +A +  GG GYIEE  +++  R++    I  G
Sbjct: 384 DKDADGLVSLMTPVIKGFLTDIGYDMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEG 443

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFST----LEQDLGSSGKKVITILRDSISLCKEDKG 499
           +     LD++   L + G       F      ++++ G   +   + +    +  K+   
Sbjct: 444 ANGVQALDLVGRKLAQDGGKHVMAFFDMVKTFIKENAGQDAEFDASFMEPLKAASKD--- 500

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
                         +A +Y          F++N       + +  L G  +  H+   + 
Sbjct: 501 ------------LQSAGMY----------FMQN----GMKNPNNALSGSNDFMHMFGHVC 534

Query: 560 L 560
           L
Sbjct: 535 L 535


>gi|294948872|ref|XP_002785937.1| Protein aidB, putative [Perkinsus marinus ATCC 50983]
 gi|239900045|gb|EER17733.1| Protein aidB, putative [Perkinsus marinus ATCC 50983]
          Length = 561

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/510 (20%), Positives = 209/510 (40%), Gaps = 29/510 (5%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N +  D  L   +           V ++L   G        +E  R    +TP    Y  
Sbjct: 12  NTFIQDGYLRRNLKRILGGARYAEVDEDLRRFGSECAGP-IREAGRQCELHTPYHIPYDA 70

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D++   P W  +   +  +GL    + R   P+ ++ +   + A+LYL A     
Sbjct: 71  WGNRIDEIWTCPQWKNMHIIAAQEGLIALAYTR---PLGKELSRVYQLAKLYLFAPSSGL 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +    ++T  +   +  + R   +                   +     G  +TE+ GG+
Sbjct: 128 YSCPLAMTDGAAFVIEKSERYRNEQLEAALGHLMSQ-----DGEEFWTSGQWMTERGGGS 182

Query: 210 DIAAIT-SQGQK--ISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLE 263
           D+ A T +   +    DG++ L+G+KWF S+  +     LA+     GR+  F +P   +
Sbjct: 183 DVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLARTPDTNGRLEMFYLPARDQ 242

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  NGL   RLK+K+G R   T E+E + +    +         + ++  +  + + + 
Sbjct: 243 QGKLNGLKIVRLKDKLGTRQLPTAEMELNASKAVRVTYDGRGLSMIMNLASITRIHNTVS 302

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF--- 380
           + +GMR  +  A  Y+ +R   G  L + P     +A++ ++  AA +L   +A      
Sbjct: 303 AAAGMRRIIQLAKDYSTKREAFGRRLQELPAHVATLAELEVEARAACSLWLEMARLLGKV 362

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           + + +  +E    R++ P++K    + A  V ++ +E  GG+G++E+  +  H R++   
Sbjct: 363 EASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGGAGFMEDTGLPSHLRDAQVL 422

Query: 441 SILLGSGNAMVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           +I  G+ N   +DVL ++ +        L    E  +G   +  +T L D       D+ 
Sbjct: 423 AIWEGTSNVQAMDVLRVITQTRGEALAALKRRFESSIGVDPR--VTSLLDQADHLLRDEF 480

Query: 500 ---LARFLTEKIALASSAAALYRAGMNDIA 526
              LA   +  +A       +   G ++ A
Sbjct: 481 PEPLALRASFLVARGVCGGLMLEHGRHEEA 510


>gi|167745777|ref|ZP_02417904.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662]
 gi|317470509|ref|ZP_07929897.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167654808|gb|EDR98937.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662]
 gi|316902024|gb|EFV23950.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 380

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 144/382 (37%), Gaps = 38/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E       LL +    GL    + + +               +  M++ +A
Sbjct: 27  PIARDMDETEEFSM--ELLEKMKKFGLMGIPYSKEYGGEGADV--LTYTLCMEEMSKADA 82

Query: 149 GHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              ++ SV      S +    +    + +               P+   S     GLTE 
Sbjct: 83  STGITISVHTSLCCSCINDFASEEQKQKFL-------------RPLVDGSKVGCFGLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLED 264
             GTD + + +      D  Y L+G K F ++   +D FI+ A  +   G   +   + D
Sbjct: 130 GAGTDASGVKTSAVLDGDH-YILNGQKVFTTNSGFADTFIIFALTDKSAGTRGMSAFIVD 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
            +  GL   +   ++G R+ +  E+   +         NV  G  +  KI +       +
Sbjct: 189 RNTPGLEVSKNIPRMGIRAASNCEVALVDVRVP---KENVIAGEGKGYKIAMSALAGGRI 245

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                SV   + +L EAI Y + R   G  +      +  IA++ + I AA  + +R A 
Sbjct: 246 GIGAQSVGIAQGALDEAIKYVKERKQFGKPIAKFQNTQFLIAELQVKIDAARLMVWRAAK 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+ ++ +        +A   K +   +A  V   A++ +GG GY  E  + R YR++ 
Sbjct: 306 AKDDHENYA-------PLAASCKLFASDVAVEVTRAAVQLLGGYGYSREYPVERMYRDAK 358

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+  AM + V   L +
Sbjct: 359 ITEIYEGTSEAMKMIVGGGLLR 380


>gi|83648430|ref|YP_436865.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636473|gb|ABC32440.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 378

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 126/359 (35%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G  C      +             +       L        S   A  + 
Sbjct: 41  RQLWNKAGEMGYLCPTMPEEYGGSGVDFRFSAVISEEISHLGLSGIGFGLHSDIVAPYIL 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K++  K+ + E                 + +TE   G+D+  + +   K  D
Sbjct: 101 HYGTESQKKNYLSKMATGEM-------------VSAIAMTEPGAGSDLQGVKTTAVKNGD 147

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D  I++A+ + + G       L + S  G    +   K+G +
Sbjct: 148 H-YVLNGSKTFITNGQHADVVIVVAKTDPKAGAKGTSLFLVESSWKGFSKGKNLEKVGMK 206

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F +    +   L     G +  M+ L    L   I ++S    +L   I Y 
Sbjct: 207 AQDTSELFFQDVMVPMENLLGAENSGFIALMQELPQERLLVGITAISACEAALDLTIKYC 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R+  G  L+     +  +A++  ++ A      R      + K            A +
Sbjct: 267 KERNAFGKPLMAFQNTRFKLAELKAEVTAGRVFLDRCLELHLDKK-------LDVPTAAM 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K W   +   V+ E ++  GG GY+ E  IAR + +S    I  G+   M   V   L
Sbjct: 320 LKQWSTDLQCKVMDECVQLHGGYGYMWEYPIARAWADSRVQKIYAGTNEIMKEIVARSL 378


>gi|11968090|ref|NP_071957.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Rattus
           norvegicus]
 gi|202687|gb|AAA40669.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Rattus
           norvegicus]
 gi|48734846|gb|AAH72545.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Rattus
           norvegicus]
 gi|149063586|gb|EDM13909.1| acetyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Rattus
           norvegicus]
          Length = 414

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 142/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   + +++    GL                     A           
Sbjct: 57  PIAAQLDKEHLFPT--SQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCAST 114

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   + +  + W               P           L+E   
Sbjct: 115 GVIMSVNNSLYLGPILKFGSSQQKQQWI-------------TPFTNGDKIGCFALSEPGN 161

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  +S  + A ++ A  +       +   L     
Sbjct: 162 GSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPT 221

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 222 PGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMQTLDMGRIGIA 278

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA  RH  G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 279 SQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKD 338

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++E+A A++ A        + A A+  +A++ +GG GY+ E    R+YR++    
Sbjct: 339 NKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERYYRDARITE 391

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 392 IYEGTSEIQRLVIAGHLLR 410


>gi|113970930|ref|YP_734723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885614|gb|ABI39666.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 385

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 145/395 (36%), Gaps = 29/395 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A           P   +WD+    P    +++++   G  CS++    E  
Sbjct: 7   EDQRQFAELARQFAA--DELAPFAAKWDEEHHFP--KDVIQKAGELGF-CSLYSPELEGG 61

Query: 128 VRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +             L         +++    +  MV    T  + + W+           
Sbjct: 62  MGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTETLRQAWSE---------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++
Sbjct: 112 ---PLTTGQMLASYCLTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVV 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
               G+ G   +  +       G+ Y + ++K+G  +  T  + F N    +   L    
Sbjct: 168 MCRTGQPGPKGISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEG 227

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A
Sbjct: 228 QGFTFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  +    A   D           A     + K +   +   V   A++  GG G
Sbjct: 288 TELVAARQMVRLAAFKLDSGDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + RH+R+   + IL G+   M L +   L
Sbjct: 342 YIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|170737392|ref|YP_001778652.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819580|gb|ACA94162.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 393

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 132/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRAGKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|332141089|ref|YP_004426827.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551111|gb|AEA97829.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 389

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 143/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P  E+ D     P  + L  +    GL        +    +   AH I    +   +   
Sbjct: 33  PLAEQADAENQFP--NQLWTKLGDMGLLGVTVSEQYGGSEMGYLAHTIAMEEVSRASGGI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIFKNGNDTQREKYLPKLVSGEH-------------VGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +  F++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLKAEKRGDKYILNGNKMWITNGPDAHTFVIYAKTDPNAGPKGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G RS+ T EL F +         N+     E +++L+  LD   + +S
Sbjct: 198 PGFSRAQKLDKLGMRSSNTCELVFEDCEVPA---ENILGKEGEGVRVLMSGLDYERLVLS 254

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M+  +   + Y   R   G  +    +++  +AD+   + AA A  + +A S D
Sbjct: 255 GGPLGIMQSCMDIVVPYIHDRQQFGQSIGQFQLIQGKVADMYTQMNAARAYVYTVAKSCD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++    
Sbjct: 315 RGETTRKDAAGA-------ILYSAELATKMALDAIQLLGGNGYINEYPTGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|148254990|ref|YP_001239575.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146407163|gb|ABQ35669.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 381

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 144/382 (37%), Gaps = 25/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   RWD+ +  P    ++R++   G+               +             
Sbjct: 22  EKIAPHALRWDEEKHFPV--DVMRQAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+    T    + + PK+ +               +     LTE
Sbjct: 80  CPTVSAFISIHNMASWMIDTFGTEAQRQAYLPKLCAM-------------DLIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y L+G K F+S   +   ++     G  G   +  L+ D
Sbjct: 127 PGAGSDAAALRTRAVRDGDD-YVLNGQKQFISGAGATDILVAMVRTGADGPGGISTLVID 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T  + F N    +   LG+  +             L+ A
Sbjct: 186 AKTPGVSFGANERKMGWNAQPTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L + + Y + R   G  L +   ++  IAD+A+++ AA    +R A + D
Sbjct: 246 ACSLGGAQSALDKTLAYTKERKAFGKRLDEFQALQFRIADMAIELEAARTFVWRAAAALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 306 RKD------ADATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           IL G+   M L V   L +G  
Sbjct: 360 ILEGTNEIMRLIVSRKLIEGAR 381


>gi|296140232|ref|YP_003647475.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028366|gb|ADG79136.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 382

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/418 (18%), Positives = 141/418 (33%), Gaps = 42/418 (10%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
                 S ++ EL+ L +      A+EL         Q H         D+         
Sbjct: 2   AARRRSSWMNDELDALRDLADKFLAKELTPHIEKFAEQHH--------VDR--------D 45

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  ++   GL C      +        H+         A   +  +   +   A  +   
Sbjct: 46  LWNKAGELGLLCLSIPEEYGGGGGDFRHESVLIAAQAQAFDTSWGVSLHNGIVAHYILAY 105

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + W PK+ S E                 + +TE   G+D+  + ++  K   G 
Sbjct: 106 GTEEQKQAWLPKMASGE-------------AVGAIAMTEPGTGSDLQNVKTRAIKTG-GE 151

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F+++   +D  +++ +     G   +  +L +    G     + NKIG +  
Sbjct: 152 YVINGSKTFITNGQQADIVVLVCKTNPDEGAAGISLILVEADREGFRKGNILNKIGQKGQ 211

Query: 285 ATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
            T EL F +    +   L      G  + M+ L    L      VSGM V   E + Y +
Sbjct: 212 DTSELFFDDVHVPVENLLGTQEGQGFYQLMQQLPQERLIIGQACVSGMEVIFEETLRYTK 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +      K  +A+   +   A           D+   +  +         + 
Sbjct: 272 EREAFGRPIFGFQNTKFKLAEALTETTIARVFV-------DDCIEKHVKGELDIPTVAMA 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K+W    A  V +E ++  GG GY+ E   AR + ++    I  G+   M   +   L
Sbjct: 325 KWWTSDRAQEVASECLQLFGGYGYMAEYPAARFWVDNRVQMIYAGTNEIMKEIIARTL 382


>gi|171317350|ref|ZP_02906545.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097491|gb|EDT42330.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 393

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 131/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +       +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|88798868|ref|ZP_01114450.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88778348|gb|EAR09541.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 588

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/478 (16%), Positives = 168/478 (35%), Gaps = 60/478 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERW-----DKVEFHP-AWHALLRRSIHDGLHC 117
            + +   +E AR+      +L      G+       D V   P  +          G   
Sbjct: 37  ELANAIFEEGARLCEG---ELFPLNRSGDEEECQYNDGVVTTPSGFKEAYATYAESGWVG 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              D ++      +   +    +   +        + +  +   +    +  + + + P 
Sbjct: 94  LSGDVNYGGQGMPKMLTVMFEEMLYASNTSFALYPALTAGACLSLLTHGSEDLKQTYLP- 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                       PM +   +  + LTE   GTD+  + ++     DG Y ++G K F++ 
Sbjct: 153 ------------PMYEGRWSGSMCLTEPHCGTDLGIMKTKAVPKGDGSYDITGTKIFITG 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+++ +     G  N +    +++K+G 
Sbjct: 201 GEHDLNENIIHLVLAKLPDAPAGPKGISLFLVPKIMVNDDGSLGDRNAVRCGSIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +++AT  + F    G+L+G+ N     +  M     L   +  +    VS   A  YA  
Sbjct: 261 KASATCVMNFDGATGYLIGEENRGLAAMFTMMNYERLSIGLQGIGLGEVSYQSARAYALD 320

Query: 342 RHVSGGI------------LIDQPVMKRAIADIALDIAAATA------LSFRLANSFDEA 383
           R  S               +I  P ++R +           A      +   +A   D+A
Sbjct: 321 RIQSRAPTGAVNPDQAADPIIVHPDVRRMLLTQRAYNEGGRAFAAYVGMWLDVAKGSDDA 380

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + +    A   ++ P+ K +             +  GG GY+ E  + +  R++    I 
Sbjct: 381 EQKKTAEAMVALLTPVAKAYFTDRGLDATILGQQVFGGHGYVREWGMEQFVRDARIAQIY 440

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLCKED 497
            G+     LD++   ++  G   F    + +E  L   S   + +++L+ ++    E 
Sbjct: 441 EGTNGIQALDLMGRKVVANGGESFRLFRAEVESFLAECSGLDEEVSMLKRALEQLSEA 498


>gi|169795529|ref|YP_001713322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii AYE]
 gi|184158668|ref|YP_001847007.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213158530|ref|YP_002319828.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483016|ref|YP_002325221.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|301344986|ref|ZP_07225727.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513238|ref|ZP_07238475.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596353|ref|ZP_07241361.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332874363|ref|ZP_08442274.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|169148456|emb|CAM86322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii AYE]
 gi|183210262|gb|ACC57660.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057690|gb|ACJ42592.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986266|gb|ACJ56565.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|322507521|gb|ADX02975.1| Putative acyl-CoA dehydrogenase protein [Acinetobacter baumannii
           1656-2]
 gi|323518583|gb|ADX92964.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737442|gb|EGJ68358.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 378

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 128/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  +   +    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D   
Sbjct: 249 VGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|262369782|ref|ZP_06063110.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315850|gb|EEY96889.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 378

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 125/376 (33%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA    L+     G         +          + A           
Sbjct: 24  PTAAARDKTAQFPA--QELKELGELGALGMTVSPEWGGAGLDYISLVVALEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    +     T    + +  K+ + E+                  LTE + 
Sbjct: 82  STIVSVQNSLPCGITQRYGTDAQKQQYLSKLATGEW-------------LGCFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+  +  +  +        ++  +   +   ++ A  +   G   +   L     
Sbjct: 129 GSDAGALECKAVREGEEWVLNGTKQFITTGKHAQVALVFAVTDKGAGKKGISCFLVPTDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R++ K+G   + T  +   N        L     G    +  L    +  A  S
Sbjct: 189 EGYIVSRIEEKMGQHCSDTATIVLENCRIPADHLLGAEGEGYKIALSNLESGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L  A+ YA  R   G  ++    +   +AD+A  I AA  L F  A   D   
Sbjct: 249 VGMARAALDAAVEYANDRKAFGVEIVQHQAVAFRLADMATQIEAARQLIFHAAALKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ +   L +   + K
Sbjct: 362 GASDIQRLVIAREVTK 377


>gi|1168286|sp|P15651|ACADS_RAT RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
          Length = 412

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 142/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   + +++    GL                     A           
Sbjct: 55  PIAAQLDKEHLFPT--SQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   + +  + W               P           L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSSQQKQQWI-------------TPFTNGDKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  +S  + A ++ A  +       +   L     
Sbjct: 160 GSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA  RH  G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++E+A A++ A        + A A+  +A++ +GG GY+ E    R+YR++    
Sbjct: 337 NKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERYYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|29347216|ref|NP_810719.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
 gi|298387470|ref|ZP_06997022.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14]
 gi|29339115|gb|AAO76913.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
 gi|298259677|gb|EFI02549.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14]
          Length = 568

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 178/469 (37%), Gaps = 48/469 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKENLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P++   E               + + LTE   G+D+ A+ 
Sbjct: 143 QDCIETLYEFGNADQHSRFIPRVCQGE--------------TMSMDLTEPDAGSDLQAVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R+++K+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIEHKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +ID P +   +A +   + A  AL ++ A   D          E
Sbjct: 309 NEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGRALLYQTARYVDIYKALDDISRE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L   + F T+      + L S  KK+  +   
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETVPCSPEMEPLMSRLKKMADLFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           S +  KE +        AR L E  A       L +      AD+F ++
Sbjct: 489 STNAVKEAQDQELLDFTARRLMEMAADIIMCHLLIQDASKA-ADLFSKS 536


>gi|118589277|ref|ZP_01546683.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM
           12614]
 gi|118437977|gb|EAV44612.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM
           12614]
          Length = 593

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/558 (18%), Positives = 190/558 (34%), Gaps = 92/558 (16%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGL 115
             LG+ ++     E  R A      L+A     G      KV   P W       I  G 
Sbjct: 29  AELGDDLVDAILTEAGRFAAEEIAPLNAVADKHGTPLSDGKVSTPPGWREAYHAWIEGGW 88

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKD 173
           +    D               AA L +         + P++T  ++ A+    +  +   
Sbjct: 89  NSLTADPESGGQGLPVMMS--AAALEMWNSGSMAFAIGPTLTIGAIEAMEKHASDELKAK 146

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K 
Sbjct: 147 YLEKLVSGEWMGT-------------MNLTEPQAGSDLNALKAKAERRDDGTYRIFGQKI 193

Query: 234 FLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA++         +  FLVP+ L +     G  N +    +++
Sbjct: 194 FITYGDHDLTDNIIHMVLARLPDAPAGTKGISLFLVPKFLVNDDGSLGERNDVKVGGVEH 253

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G   + T  + + +     G+L+G+ N     +  M     L   I  +     +   
Sbjct: 254 KMGIHGSPTCTMVYGDEGGAIGWLVGEENRGLACMFTMMNNARLAVGIQGLGVAERAYQH 313

Query: 335 AIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           A+ YA  R               +   P +KR +  +      A A+ +  A++ D +K 
Sbjct: 314 ALAYALERKQGRAPGDTGEGMSPIARHPDIKRMLLGMKARTQVARAICYACAHAIDMSKI 373

Query: 386 RSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +EA        A ++ PI K         V +  ++  GG G+IEE   A+H R++  
Sbjct: 374 AEDEAGKTFWSERASLLTPIAKALPTDFGVEVASLGIQIHGGMGFIEETGAAQHLRDARI 433

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ-----------DLGSSGKKVITI 486
             I  G+       L +  L   G    +   + L+            + G++  ++   
Sbjct: 434 APIYEGTNGIQSIDLVMRKLPLSGGEHIKGFIAELQAVADEVAASNRPEFGATADRLSAS 493

Query: 487 LRDS-----ISLCKEDKGL-------ARFLTEKIALASSAAALYRAGMND---------- 524
           +RD        L  + +G        A        L      L R  +            
Sbjct: 494 IRDLEEATGFMLSAQAEGRIGDALAGATPYLRLAGLTLGGVLLARGALASSGEPAQRLSE 553

Query: 525 ---IADVFLENRFLDNCH 539
              +A  F E    +   
Sbjct: 554 RTLLARSFCETTMGETAG 571


>gi|325271494|ref|ZP_08138012.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103384|gb|EGC00713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 601

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 181/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    + A   + +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDQEGCIWSESGVKTPTGFKAAYEQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLALSEMVGGANWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  NG+    +++K+G   N
Sbjct: 204 DMAENIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +      G + +    + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGVEAVKEFVEPLAAINKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|224823857|ref|ZP_03696966.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224604312|gb|EEG10486.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 593

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/475 (20%), Positives = 179/475 (37%), Gaps = 51/475 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH--PAWHALLRRSIHDGLHCSIWD 121
            ++     E AR A      ++  G  G R D       P +    ++ +  G       
Sbjct: 35  ELVDAILDEGARFAEEVLAPINKQGDKGARLDGETVTAAPGFKNAWQQYVDAGWVGLRAP 94

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             F          I A  ++  A L        ++ +   +    +  +   + PK+ S 
Sbjct: 95  YEFGGQGLPALVAIAAEEMWCSANLAFSLAPLLTLGAIEALNHHASDELKALYLPKMASG 154

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+  T             + LTE + G+D+A + ++     DG Y +SG K F++    D
Sbjct: 155 EWTGT-------------MNLTEPQAGSDLAQVRTRAVPQDDGSYRISGQKIFITWGEHD 201

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++         +  F+VP+ L       G+ N L    L++K+G   + 
Sbjct: 202 LAENIVHLVLARLPDAPAGVKGISLFVVPKFLPGADGTPGARNDLRCVSLEHKLGIHGSP 261

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F +     G+L+G+ N   G +  M     L   +  ++    +  +A+ YAR R
Sbjct: 262 TCVMSFGDQGGAAGYLVGEANKGLGYMFTMMNHARLGVGVEGMAVSERAYQQAVAYARER 321

Query: 343 HVS---------GGILIDQPVMKRAIADIALDIAAATALSFRLANS------FDEAKSRS 387
             S         G  +I  P ++R +  +   I A  AL+F  A +          + ++
Sbjct: 322 VQSRAVGSPDAAGVAIIKHPDVRRMLMTMKAQIEAQRALAFVAAAALDRAARHPHPQEKA 381

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A    + PI K W  + A  + + A++  GG GYIEE  +A++YR++   +I  G+ 
Sbjct: 382 RNQALVNFLIPIVKGWNTEQANEITSLALQVHGGMGYIEETGVAQYYRDARITAIYEGTT 441

Query: 448 NAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
               LD++      +       L + ++             L  ++     D   
Sbjct: 442 GIQALDLIGRKTAAEEGATARALLAEVQATADKLATAGFASLSANLKSAAADAER 496


>gi|239939873|ref|ZP_04691810.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986358|ref|ZP_04707022.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 434

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 141/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD     +    P+   ++L  L   ++S              P+       G       
Sbjct: 46  SDRAPQPVERRLPTEESRQLVALVRDIVSKEI----------APRAAEEEEAG------- 88

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    +       GL    +  +     +     ++       A+L  G  +S    +
Sbjct: 89  VFP--REVFTLLSEAGLLGLPYGSAHGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLA 146

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T        P + S               +     L+E   G+D A++ ++ 
Sbjct: 147 CHALAGYGTDAQQAAHLPAMLSG-------------GLLGAYCLSEPASGSDAASLRTKA 193

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D   +LA+  G  G   +   L  G   GL     + K
Sbjct: 194 VRDGDDWVITGTKAWITHGGVADFCTVLART-GVEGARGITAFLVPGDAEGLNAALPEKK 252

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  ++   + +L EA
Sbjct: 253 MGMKGSPTAQLHFDGVRVGDDRRIGEEGQGFAIALSALDSGRLGIAACAIGVAQAALDEA 312

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D  +  S +AA A  
Sbjct: 313 VRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRALYLEAARLRDAGEPFSRQAAMA-- 370

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A  V  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 371 -----KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVERLMREAKVLQIVEGTNQIQRMVIA 425

Query: 456 NLL 458
             L
Sbjct: 426 RHL 428


>gi|239787389|emb|CAX83865.1| Probable acyl-CoA dehydrogenase protein [uncultured bacterium]
          Length = 379

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 140/375 (37%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK   +PA    +      GL   +   ++            A           
Sbjct: 24  PFSASWDKENSYPA--EAIAEMGALGLMGMLLPEAWGGAEADHVSYALALEEIAAGDASC 81

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   M +    T    K + P++ +                     LTE + 
Sbjct: 82  STIMSVHNSVGCMPIYKFGTDEQKKRFLPEMATG-------------KKIGIFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A + ++  K  +  Y L+G K F++S  +    I  A  +   G   +   +    
Sbjct: 129 GSDAANLKTKAVKDGNSGYILNGTKQFITSGRNGQVMIAFAVTDPAAGKKGITAFIVPTD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G    R++ K+G  ++ T ++ F +    +   L     G    +  L    +  A  
Sbjct: 189 TPGYKVWRVEEKMGQHASDTCQVLFEDMRLPVDLRLGQEGEGYKIALSNLEGGRIGIASQ 248

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L  AI YA+ R   G  +     +   +AD+A+ I AA  L    A   DE 
Sbjct: 249 SVGMAKAALETAISYAKERTAFGKPIAQHQAVGFRLADMAMRIEAARHLVLEAARLRDEG 308

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +EA+ A       K +  +MA  V+++A++ +GG GY+ +  + R YR+     I 
Sbjct: 309 LPCLKEASMA-------KLFASEMAERVVSDAIQTLGGYGYLADFPLERIYRDVRVTQIY 361

Query: 444 LGSGNAMVLDVLNLL 458
            G+ +   + +   L
Sbjct: 362 EGTSDVQRMVIARAL 376


>gi|218289139|ref|ZP_03493375.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240722|gb|EED07901.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 593

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 82/473 (17%), Positives = 175/473 (36%), Gaps = 39/473 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +    ++  +   +            A        + +      +  
Sbjct: 64  KLLRKAADLGLLSAEVPEAYGGLGLDKVSATLINEHVSRAGSFGLSFGAHTGIGTLPIVY 123

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K + PK+ S E+                  LTE   G+D     +  +   DG
Sbjct: 124 FGNEEQKKKYLPKLASGEW-------------IGAYCLTEPSSGSDALGAKTTAKLSEDG 170

Query: 225 -IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D F++ A+V+G+         + + +  G+ +   + K+G +
Sbjct: 171 KYYILNGTKQFITNAGFADVFVVYAKVDGQH----FSAFIVERTMPGVSFGPEEQKMGIK 226

Query: 283 SNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++   +    +     ++        ++  +        ++ G +++L  +  YA
Sbjct: 227 GSSTRQVILEDVKVPVENLLFEVGKGHQIAFNILNIGRFKLGAGALGGSKIALETSAKYA 286

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
             R   G  L + P+++R +A +   I A  ++ +R A   D                 +
Sbjct: 287 NERKQFGKKLSEFPLIQRKLARMNTQIYALESVVYRTAGLLDAILETVDVTKPDAGVQSA 346

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   I K +  ++   V+ EA++  GG G+I+E  + + YR+S  N I  G+ 
Sbjct: 347 KAIAEYAIECSINKVFGSEVLDFVVDEAVQIHGGYGFIKEYGVEQMYRDSRINRIFEGTN 406

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               + +   + +     E       Q L +   +++  L     +  E+K L   + +K
Sbjct: 407 EINRMLIPGTMLRRAMKGELPLFQKAQALQAELMQMVPGLTPPEGVLAEEKQLIENM-KK 465

Query: 508 IALASS--AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           + L     AA   +A +ND  +  +     D              A   ++S 
Sbjct: 466 VFLMVGGLAAQALQARVNDEQE--ILANLADIAIQAFAAESAYLRAMQQVESA 516


>gi|317406170|gb|EFV86424.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 375

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 138/398 (34%), Gaps = 28/398 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +L+     +  MA           P  ERWD+   +PA    +R     G    +    +
Sbjct: 2   LLTEEQLSVQDMARRFA--QERLAPNSERWDREHHYPA--DAIREMADLGFFGMLVPEEW 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
           +           A             +MS   + A M  L   +      +         
Sbjct: 58  DGNASGYLSYAVALEEIAAGNGACSTIMSVHNSVACMPILKYGSDAQKDQFL-------- 109

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+   +   G  LTE + G+D +++ ++  +  D        ++  S       
Sbjct: 110 -----RPLATGAAIGGFALTEPQAGSDASSLRTRAVRDGDHYVLNGAKQFITSGRTGQLV 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           I+ A  + + G   +   +      G    R+++K+G   + T ++ F +      + LG
Sbjct: 165 IVFAVTDPQAGKRGISAFIVPTDTPGYQVVRVEDKLGQHLSDTCQIAFEDMRIPAAWRLG 224

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +                +  A  SV   R +   A  YAR R   G  +++   +   +A
Sbjct: 225 EEGEGYKIALSNLEGGRIGIASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVSFRLA 284

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  +    A   +  +        A   A + K +  +MA  V + A++ +G
Sbjct: 285 DMATQIHAARQMVLHAAALREAGRP-------ALTEASMAKLFASEMAEKVCSAAIQTLG 337

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 338 GYGYLADFPVERIYRDVRVCQIYEGTSDIQRLVIARAL 375


>gi|26987112|ref|NP_742537.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24981741|gb|AAN66001.1|AE016229_2 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 592

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 96/543 (17%), Positives = 191/543 (35%), Gaps = 66/543 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E  +  A    P   A    G  WD   V     +          G      D  F
Sbjct: 42  AVLEEAGKVTARTIAPLSRAADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLF 101

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +   +A   +   +   + L  G     +  +   +    +  + + + P +++  + 
Sbjct: 102 GGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVW- 160

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
                       A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D   
Sbjct: 161 ------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTE 208

Query: 242 --AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ L +     G+ N      +++K+G +++AT  
Sbjct: 209 NIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCV 268

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + F    G+++G+ N     +  M     L   I  ++    S   A+ YAR R  S   
Sbjct: 269 MNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAP 328

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA----- 391
                       +I  P ++R +  +   I    A S  +A   D AK  SE+A+     
Sbjct: 329 AGPQAKDKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYVAMQLDSAK-YSEDASVRKRS 387

Query: 392 --YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ P+ K +   +         +  GG GYI E    +  R+     I  G+   
Sbjct: 388 EELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGI 447

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             LD++   ++  G   ++     + Q +  +G ++    +   +   +  GL  ++ ++
Sbjct: 448 QALDLMGRKVVASGGAYYKLFSDEIRQFITGAGSELDEFAKPLGASLDQLDGLTEWVLQQ 507

Query: 508 IAL----ASSAAALYRAGMNDIA----DVFLE-NRFLDNCHSTH--CMLH-GRFNAAHII 555
                    +A+  Y      +A       +          +      L   RF  A ++
Sbjct: 508 AKGNPNEIGAASVEYLHAFGYVAYGYMWALMARAALAGEGDAPFYSGKLGTARFYFARLL 567

Query: 556 DSL 558
             +
Sbjct: 568 PRV 570


>gi|332992797|gb|AEF02852.1| Acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 599

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/486 (18%), Positives = 174/486 (35%), Gaps = 56/486 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDG 114
            +   E ++S    E A+ +  +   ++      G +W   +V     +    ++ +  G
Sbjct: 30  FDEASEDLVSAIFSEAAKFSENSLAPINMSGDEEGCKWVDGEVTTPAGFKEAYQQYVEGG 89

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                    F       +     A  +  A          S      +    T  +   +
Sbjct: 90  WPSMSHPEEFGGQALPYSLSSIIAEWFSGANHSWAMYPGLSQGCMETIKAHGTETLQNQY 149

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+  T             + LTE   G+D+  +  + +   DG Y L+G K F
Sbjct: 150 LPKLISGEWTGT-------------MCLTEAHCGSDLGMLKCRAEPQDDGSYSLTGTKIF 196

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNK 278
           +S+   D       I+LA++ G       +  F+VP+       E    NG+    +++K
Sbjct: 197 ISAGEHDMSENIVHIVLARLPGAPEGTKGISLFVVPKFNVSDEGEKLDRNGVACGSIEHK 256

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G +++AT  + F    GFL+G  N     +        + + +  ++    S   A+ Y
Sbjct: 257 MGIKASATCVINFDGAKGFLIGQPNRGLNCMFTFMNTARIGTGLEGLAASEASFQGALRY 316

Query: 339 ARRRHVS----GG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSF------ 380
           A+ R       G          +I  P ++R +           AL+             
Sbjct: 317 AKDRIQFRSLTGRKNQDGPADPIIVHPDVRRMLLTQKAFAEGNRALAAYCMQLVDVTLYG 376

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+A+ ++        + PI K +  + A    +  M+  GG G+I+E  + +  R++   
Sbjct: 377 DDAQEKTLADTKLAFLTPIVKAFLTETAQESTSYGMQVYGGHGFIKEWGMEQLARDTRIC 436

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           ++  G+     +D+L     G+N   +L +   Q++    ++    LR           L
Sbjct: 437 TMYEGTTGIQAIDLLGRKVMGSN--GELLNVFVQEV----REYCESLRGKAQFSAWTNAL 490

Query: 501 ARFLTE 506
              L E
Sbjct: 491 TSHLDE 496


>gi|255535709|ref|YP_003096080.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341905|gb|ACU08018.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 379

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 64/370 (17%), Positives = 127/370 (34%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D  +  P  H  +++    G    + D  +          + A          A  +MS 
Sbjct: 32  DNAQKFP--HEQVKKMGELGFLGMMVDPKYGGAGMDSISYVLAIEEIAKVDASAAVVMSV 89

Query: 155 SVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           + +     +    T      +   + S E             V     L+E   G+D  +
Sbjct: 90  NNSLVCAGLEKYCTEDQKMKYLKPLASGE-------------VIGAFALSEPEAGSDATS 136

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             +      D         W  +   +  +I++AQ +       +   + +    G    
Sbjct: 137 QQTTAIDKGDHYLLNGTKNWITNGGNATYYIVIAQTDPEKKHKGINAFIVEKGWEGFEIG 196

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             ++K+G R + T  L F++        +GD          +     +  A  ++     
Sbjct: 197 PKEDKLGIRGSDTHSLLFTDVKVPKENRIGDDGFGFAFAMGVLGGGRVGIASQALGIASG 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ YA+ R      +I+   +   +AD+A +I AA  L ++ A   D  K  +E  
Sbjct: 257 AYELALKYAKTRKAFKTEIINHQAIAFKLADMATNIMAARMLCYKAAVDKDAGKDIAEIG 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +  ++A     EA++  GG GY++E  + R  R++    I  G+    
Sbjct: 317 AMA-------KLYASQVAMDTTIEAVQIHGGYGYVKEYHVERMMRDAKITQIYEGTSEIQ 369

Query: 451 VLDVLNLLEK 460
            + +   + K
Sbjct: 370 KIVISRSIAK 379


>gi|154686272|ref|YP_001421433.1| YngJ [Bacillus amyloliquefaciens FZB42]
 gi|42491133|emb|CAE11270.1| YngJ protein [Bacillus amyloliquefaciens FZB42]
 gi|154352123|gb|ABS74202.1| YngJ [Bacillus amyloliquefaciens FZB42]
          Length = 380

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 140/380 (36%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P      ++    GL    +   +        ++      +       
Sbjct: 26  PKAHEVDQSAVFPI--DTFKKIGELGLLGIPFPEEYGGAGGDTISYAAAVEEIGKACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T +  ++    + S                    GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEQQKQEHLIPLASG-------------KALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D     ++ +K   G Y ++G K ++++      +++  V G+   G  ++  L+   
Sbjct: 131 GSDAGGTQTKAEKKG-GDYVINGEKCWITNANYARTVIVTAVTGKNSAGKPIISALIVPT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              G       +K+G R + T EL   +        L       +    L  LD   +S+
Sbjct: 190 DTPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGDPEKGFKQF--LYTLDGGRISI 247

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDLARQMVLKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    ++EAA+A       K +  +MA     +A++  GGSGY++E  + R  R++   
Sbjct: 308 DQNLPFTKEAAFA-------KLYASEMAVRTCLQAIQIHGGSGYMKECGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 361 EIGEGTSEIQRMVIARQLLK 380


>gi|159184345|ref|NP_353529.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159139661|gb|AAK86314.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 598

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/547 (20%), Positives = 199/547 (36%), Gaps = 100/547 (18%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLH 116
            ++     E A++A     +L      G+     R D   V     + A        G  
Sbjct: 36  DMIEAITGEAAKLAEE---RLFPLNLSGDQQGCKRADDGSVSVPDGFKAAYDAYCEGGWI 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                  F        + + AA    M+      +M P +T  ++ A+    T    + +
Sbjct: 93  GLAVPSEFGGQGLP--YTLHAAIGEYMSSANLSLMMYPGLTQGAIAAVLVHGTQEQKETY 150

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+    +  T             + LTE   GTD+  + ++     DG Y +SG K F
Sbjct: 151 LPKMVEGTWSGT-------------MNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIF 197

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S+           +++A++EG       +  F+VP+ L       G  NG+    +++K
Sbjct: 198 ISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDGTLGERNGVTCGAIEHK 257

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   NAT  + + +  G+LLG  N     +  M     L   +  +S   ++   A+ Y
Sbjct: 258 MGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQGLSVGEIAYQNAVEY 317

Query: 339 ARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           AR R   G               +I  P ++R +  I     A  A     A   D A  
Sbjct: 318 ARDRIQ-GRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAFLLWTALQSDIAHR 376

Query: 386 RSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++E           ++ PI K             A +  GG GYIEE  ++++ R++  
Sbjct: 377 AADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARI 436

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDK 498
             I  G+     LD++                  + LG + G+ V+ + ++    C+E++
Sbjct: 437 TMIYEGANGIQALDLVG-----------------RKLGMNGGRAVMALFKEIGDFCEENR 479

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAH 553
                  EK++L +      + G+ND+      F++N     DN         G  +  H
Sbjct: 480 A-----DEKLSLYTKG---LKKGLNDLQAATMWFMQNAMAKPDNAG------AGSTDYMH 525

Query: 554 IIDSLYL 560
           +   + L
Sbjct: 526 LFGIVVL 532


>gi|86356551|ref|YP_468443.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86280653|gb|ABC89716.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 593

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/480 (19%), Positives = 177/480 (36%), Gaps = 59/480 (12%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L       G R    +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLVDGEVRLPDGWRDLYRSWISGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                +F        H +  A L +         ++P++T  ++ A+    +  +   + 
Sbjct: 91  LTAPEAFGGQALP--HMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALKDKYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+  + ++ ++ +DG Y +SG K F+
Sbjct: 149 AKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRISGQKIFI 195

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L +     G  N L    L++K+
Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + + +          G+L+G+ N     +  M     L   +  V+    +
Sbjct: 256 GIHGSPTCTMIYGDGRFGGEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAA 315

Query: 332 LAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
             +A+ YAR R               +I+ P + R +  +      A A+SF  A++ D 
Sbjct: 316 TQKALAYARERTQGRAPGWSGPGMSPIIEHPDVARMLLTMKALTQGARAISFACAHAIDM 375

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                 +       A ++ P+ K +       V +  ++  GG G+IEE   AR+ R++ 
Sbjct: 376 SRRAGDTSRHWQERAALLTPVAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDAR 435

Query: 439 ANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              I  G+       L    L   G +      + L+    +     +    ++ +    
Sbjct: 436 IAPIYEGTNGIQAIDLVTRKLPLSGGDQVRGFIAELKSVADAVRHSNLDGFGETAARLDA 495


>gi|325122697|gb|ADY82220.1| putative acyl-CoA dehydrogenase protein (AcdB-like) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 378

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 129/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALLFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  + F +    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITFEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D   
Sbjct: 249 VGMARAAFDAAVQYANERKAFGVELVQHQAVGFCLADMATQIEAAHQLVLHAATLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|114048154|ref|YP_738704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889596|gb|ABI43647.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 385

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 145/395 (36%), Gaps = 29/395 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A           P   +WD+    P    +++++   G  CS++    E  
Sbjct: 7   EDQRQFADLARQFAA--DELAPFAAKWDEEHHFP--KDVIQKAGELGF-CSLYSPESEGG 61

Query: 128 VRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +             L         +++    +  MV    T  + + W+           
Sbjct: 62  MGLTRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTETLRQAWSE---------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++
Sbjct: 112 ---PLTTGQMLASYCLTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVV 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
               G+ G   +  +       G+ Y + ++K+G  +  T  + F N    +   L    
Sbjct: 168 MCRTGQPGPKGISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEG 227

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A
Sbjct: 228 QGFTFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA  +    A   D           A     + K +   +   V   A++  GG G
Sbjct: 288 TELVAARQMVRLAAFKLDSGDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + RH+R+   + IL G+   M L +   L
Sbjct: 342 YIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|326381424|ref|ZP_08203118.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199671|gb|EGD56851.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 391

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 137/379 (36%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD     P     +R +   G+              ++   +R       A
Sbjct: 23  KRLAPYSLEWDATAHFPV--DEMREAASLGMAGIYTSEDVGGSGLRRIDGVRIFEELAKA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       MV    TP   K W P + S E                   LTE
Sbjct: 81  DPVTAAFLSIHNMCTWMVDTYGTPEQRKRWVPAMASME-------------SIASYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+++  ++  D        ++     +SD ++++A+  G  G   +   + +
Sbjct: 128 PGAGSDAAALSTSARRDGDHFVLRGSKQFISGGGVSDVYVVMART-GDAGARGISTFVVE 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
               GL +   + K+G  +  T ++ F +        L    G      I +       L
Sbjct: 187 KGTPGLSFGPPEAKMGWHNQPTAQVVFDDVRVPADAMLGGPDGQGTGFSIAMNGLNGGRL 246

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  S+ G + +  +A+ YA  R   GG LI +P +   +A++A  + A+  + +R A 
Sbjct: 247 NIAACSMGGAQSAYDQALVYATEREAFGGPLIAEPTIAATLAEMATSLEASRLMLWRAAE 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D       E      +  + K +  +    V  +A++  GG GY+ E  I +  R+  
Sbjct: 307 ALDADDPDKVE------LCAMAKRFVTENCFTVADQALQLHGGYGYLHETGIEKIVRDLR 360

Query: 439 ANSILLGSGNAMVLDVLNL 457
            N IL G+   M + +   
Sbjct: 361 VNRILEGTNEIMRMVIGRA 379


>gi|114570289|ref|YP_756969.1| isovaleryl-CoA dehydrogenase [Maricaulis maris MCS10]
 gi|114340751|gb|ABI66031.1| isovaleryl-CoA dehydrogenase [Maricaulis maris MCS10]
          Length = 390

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK +  PA   L ++    GL                  H I    +   +   
Sbjct: 34  PRAAEIDKTDVFPA--DLWQKMGELGLLGITVSEDDGGTGLGYLEHVIAMEEISRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQMRRWGNAEQKTKYLPKLISGEH-------------VGSLAMSEPGA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  ++P ++  I+ A+ +   G   +   + +   
Sbjct: 139 GSDVVSMKLKAERKGDHFVLNGSKMWITNAPAANTLIVYAKTDTSAGSRGISAFIIERGM 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +    +   +      VE +   +  + A+++   
Sbjct: 199 KGFSVAQKLDKLGMRGSETGELVFEDCEVPVENMMGDEGKGVEILMSGLDYERAVLASGP 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y R R   G  + +  +++  +AD+ + + A  A  + +A + D  +
Sbjct: 259 VGIMQSCMDVVMPYIRERKQFGKSIGEFQLVQGKLADMYVRMNATRAYVYAVAQACDRGQ 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 319 TTRKDAAGA-------ILYAAEGATQMALDAIQLLGGNGYINEFPAGRLLRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+       +   L   TN
Sbjct: 372 GTSEIRRWLIGRELFDETN 390


>gi|170727539|ref|YP_001761565.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812886|gb|ACA87470.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 385

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 148/399 (37%), Gaps = 27/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++ A +A   + +     P   +WD+    P    +++R+   G        
Sbjct: 2   DFNLNDDQRQFADLAQQFSSE--ELAPFAAKWDEEHHFP--KDVIQRAGELGFCSLYSPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +           M       +++    +  M+    +  +   W+  + + E
Sbjct: 58  SEGGMGLSRLDSSIIFEQLSMGCTATTAMLTIHNMATWMLTSFGSETLRAQWSESLTTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A++ ++  +  D  Y +SG K F+S   +  
Sbjct: 118 -------------KLASYCLTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGATE 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +  +      +G+ Y + ++K+G  +  T E+ F+     +   L
Sbjct: 164 LLVVMCRTGEAGPKGISAIAVPADADGITYGKAEDKMGWNAQPTREITFTEVRVPVANLL 223

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  S+   + +L  A  Y   R   G  +     ++  +
Sbjct: 224 GEEGQGFTFAMKGLDGGRINIATCSIGTAQAALERATQYMTERKQFGKPIAAFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  L    A   D+          A     + K +   +   V   A++  
Sbjct: 284 ADMATELVAARQLVRLAAFKLDQQDPE------ATAYCAMAKRFATDIGFQVCDAALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI E  + RH R+   + IL G+   M L +   L
Sbjct: 338 GGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIIARRL 376


>gi|213964639|ref|ZP_03392839.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
 gi|213952832|gb|EEB64214.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
          Length = 394

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 121/377 (32%), Gaps = 21/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E  P     L+     G +       F                    
Sbjct: 29  KQIAPYAADVDENERFPE--EALKALNEAGFNAVHVPEQFGGQGADSVAACIVIEEVARV 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  + + +      + L  +  +     P I + E                   LTE
Sbjct: 87  CGSASLIPAVNKLGTMGLILKGSDELKSKVLPDIANGEM--------------ASYALTE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D  ++ ++  +  D         +  +   S  + ++A  +   G   +   +  
Sbjct: 133 REAGSDAGSMKTRAVREGDEWVLNGSKCFITNGGRSTWYTVMAVTDPEKGANGISAFMVH 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G     L++K+G + + T EL F N       ++GD         +          
Sbjct: 193 KDDEGFRVGGLEHKLGIKGSPTAELYFENCRIPADRIIGDEGTGFKTALETLDHTRPTIG 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +   A+ Y + R   G  +      +  +AD+ + I AA  + +  A + +
Sbjct: 253 AQALGIAQGAYDYAVGYVQERQQFGKPIAAFQNTQFMLADMRMKIDAARLMVYTAAANAE 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E  A   +MA   K +   +A  V  +A++ +GG G+  +  + R  R++    
Sbjct: 313 RG--TAEGGARLGLMAANAKAFASDVAMQVTTDAVQLLGGYGFTRDFPVERMMRDAKITQ 370

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     +     +
Sbjct: 371 IYEGTNQICRMVAGRQI 387


>gi|45361383|ref|NP_989269.1| short-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|39795787|gb|AAH64210.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus
           (Silurana) tropicalis]
 gi|89271279|emb|CAJ83244.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus
           (Silurana) tropicalis]
          Length = 409

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 78/424 (18%), Positives = 150/424 (35%), Gaps = 27/424 (6%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           S+L+ L         + L  + +        ++ R       +     P     D+    
Sbjct: 5   SVLLGLCHRAARAALRPLHTVYQTAELPETHQMLRDTCREFAE-KELQPIAAGLDREHRF 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +R+    GL                     A           G +MS + +   
Sbjct: 64  P--RDQVRQMGQIGLLAVEVPEELGGAGLDYLAYSIAVEEISRGCASTGVIMSVNNSLYL 121

Query: 161 MVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
              L   +    + W     S                     L+E   G+D  A ++  +
Sbjct: 122 GPILKHGSEEQKRQWISPFCSG-------------DKIGCFALSEPGNGSDAGAASTTAK 168

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
              +         W  ++  + A ++LA  +  +    +   L +    GL   + ++K+
Sbjct: 169 LDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGISAFLVEMPTPGLSLGKKEDKL 228

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R+++T  L F +        L     G    M+ L    +  A  ++   + +L  A+
Sbjct: 229 GIRASSTANLIFEDCRIPRQNLLGQPGMGFKIAMQTLDAGRIGIASQALGIGQAALDCAV 288

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA +R   G  +     ++  +AD+AL + +A  L++R A   D  K  ++EAA A++ 
Sbjct: 289 DYAEKRLAFGAPISKLQAIQFKLADMALALESARLLTWRAAMMKDNKKPFTKEAAMAKLA 348

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        + A  +  +A++ +GG GY+ +    RHYR++    I  G+     L + N
Sbjct: 349 A-------SEAATQISHQAIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAN 401

Query: 457 LLEK 460
            L K
Sbjct: 402 QLLK 405


>gi|126640210|ref|YP_001083194.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 333

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 72/349 (20%), Positives = 127/349 (36%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G    +    +          + A      A      +MS   +   +  L         
Sbjct: 5   GFMGMLVSEQWGGSDTGNLAYVLALEEVAAADGATSTIMSVHNSVGCVPIL--------- 55

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
              K  + E       P+ +  +     LTE   G+D AAI ++  K  D  Y L+G K 
Sbjct: 56  ---KFGTDEQKERFLKPLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGD-YYILNGAKQ 111

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F++S   +   I+ A  +   G   +   L      G    R++ K+G  ++ T ++  +
Sbjct: 112 FITSGNNAGVIIVFAVTDPSAGKKGISAFLVPRETPGYEVIRVEEKLGLHASDTCQIALT 171

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       +LG                 +  A  +V   R +L EA  YA+ R   G  +
Sbjct: 172 DVRIHKSLMLGKEGEGLKIALANLEGGRIGIAAQAVGLARAALEEATRYAKERITFGKPI 231

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +   +   +A +A +I AA  L    A   +  +    EA+ A       K +  +M  
Sbjct: 232 FEHQTIAFRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMA-------KLFASEMTE 284

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V + A++  GG GY+ +  I R YR++    I  G+ +   L +   L
Sbjct: 285 RVCSSALQVFGGYGYLRDFPIERIYRDARICQIYEGTSDIQRLVIARSL 333


>gi|329907326|ref|ZP_08274637.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547002|gb|EGF31895.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 376

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 144/392 (36%), Gaps = 29/392 (7%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ R A  +  Q     P   RWDK    P     LR     G +      +        
Sbjct: 8   EMIRDALRSFAQ-ERLVPNAARWDKEHHFP--QDELRGLAELGAYGVAVPEALGGAGLDY 64

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190
                              ++S +      + +M       + W               P
Sbjct: 65  VALALVIEEIAAGDGGVSTVISVNNCPVCSIGMMYANAAQKEQWL-------------RP 111

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
           + + ++     LTE   G+D +++ +   +  D  Y L+G K F++S   +D  I+LA  
Sbjct: 112 LAQGTMLGAFCLTEPHAGSDASSLLTTAVRDGDD-YVLNGVKQFITSGKHADVAIVLAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +   G   +       S  G    RL++K+G  S+ T  + F N       L+GD     
Sbjct: 171 DKAAGKRGISAFWVPTSAPGYVVTRLEDKLGQHSSDTAAIAFENCRIPVANLIGDEGQGY 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +  A  +V   R +   A+ YA+ R   G  + +   ++  +AD+A  +
Sbjct: 231 RIALSGLEGGRIGIAAQAVGMARAAFDAALAYAKDRSSFGKTIYEHQAVQFKLADMATQL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D      +EAA A       K +  +MA  V ++A++  GG GY+ 
Sbjct: 291 EAARQLVWHAASLKDAGVPCLKEAAMA-------KLFASEMAERVCSDAIQIHGGYGYVS 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   + +   L
Sbjct: 344 DFPVERIYRDVRVCQIYEGTSDIQKILIGRAL 375


>gi|261251347|ref|ZP_05943921.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891]
 gi|260938220|gb|EEX94208.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891]
          Length = 389

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 150/410 (36%), Gaps = 40/410 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + +EL LL E+V     Q +A +A+                D+    P  + L      
Sbjct: 11  GLDEELNLLREHVHGFAQQNIAPLASQ--------------VDQDNAFP--NQLWPLFGE 54

Query: 113 DGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            GL     D  +    +   AH I    +   +   A    + S    + +         
Sbjct: 55  MGLLGVTVDEQYGGAHMGYLAHVIAMEEISRASASVALSYGAHSNLCVNQIFRNGNESQR 114

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + PK+    +                L ++E   G+D+ ++  +     D        
Sbjct: 115 AKYLPKLIDGSH-------------IGALAMSEPNAGSDVVSMQLKATLNGDYYLLTGSK 161

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P +D  ++ A+ E   G   +   + +   +G  + +  +K+G R + T EL F
Sbjct: 162 MWITNGPDADVIVVYAKTEPDKGSHGITAFIVEKKFSGFSHAQKLDKLGMRGSNTCELVF 221

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N       +LG+LN     +        +  A   +  M+  L   I Y   R   G  
Sbjct: 222 DNCPVPKENILGELNQGVKVLMSGLDYERVVLAAGPLGIMQACLDIVIPYIHDRKQFGRS 281

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + +  +++  +AD+     AA A  + +A + D  ++  ++AA A         +C ++A
Sbjct: 282 IGEFQLVQAKVADMYTRTNAARAYLYTVAKACDNKQTTRKDAAGA-------ILYCAELA 334

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  +A++ +GG+GYI E    R  R++    I  G+     + +   L
Sbjct: 335 TQLALDAIQLLGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|24373247|ref|NP_717290.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24347481|gb|AAN54734.1|AE015614_1 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 385

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 80/396 (20%), Positives = 146/396 (36%), Gaps = 31/396 (7%)

Query: 68  CTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++ A +A    T +L    P   +WD+    P    +++++   G  CS++    E 
Sbjct: 7   EDQRQFAELARQFATDELA---PFAAKWDEEHHFP--KDVIQKAGELGF-CSLYSPESEG 60

Query: 127 VVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +             L         +++    +  MV    T  + + W+          
Sbjct: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTETLRQAWSE--------- 111

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P+    +     LTE   G+D A++ ++     D  Y +SG K F+S   S   ++
Sbjct: 112 ----PLTTGQMLASYCLTEPGAGSDAASLQTKAVPDGDE-YVVSGSKMFISGAGSTELLV 166

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV- 304
           +    G+ G   +  +       G+ Y + ++K+G  +  T  + F N    +   L   
Sbjct: 167 VMCRTGQAGPKGISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEE 226

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+
Sbjct: 227 GQGFTFAMKGLDGGRINIATCSVGTAQAALERASQYMNERQQFGKPLAAFQALQFKLADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  +    A   D                 + K +   +   V   A++  GG 
Sbjct: 287 ATELVAARQMVRLAAFKLDSGDPEGTA------YCAMAKRFATDVGFQVCDAALQIHGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E  + RH+R+   + IL G+   M L +   L
Sbjct: 341 GYIREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|315445618|ref|YP_004078497.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263921|gb|ADU00663.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 389

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 127/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L   + +G +       +                       A
Sbjct: 36  PYAADVDENARFP--QEALDALVANGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P + + E                   L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKQKVLPSLAAGE-------------SMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   SD + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRAKADGDDWILNGAKCWITNGGKSDWYTVMAVNDPDKGANGISAFMVHVDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFSIGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIEYTKDRKQFGKSISDFQAVQFMLADMAMKVEAARLMVYSAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GEGN------LGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 372 YEGTNQIQRVVMSRALLK 389


>gi|188591193|ref|YP_001795793.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|170938087|emb|CAP63071.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 595

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/447 (19%), Positives = 166/447 (37%), Gaps = 65/447 (14%)

Query: 95  DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D V   P  +    ++ +  G      D +F          +      ++        M 
Sbjct: 71  DGVVKAPTGFKEAYQQYVEAGWPALACDPAFGGQGLPI--VVNNVVYEMLNSANQAWTMY 128

Query: 154 PSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P ++  +  AL    TP + + + PK+ S  +  T             + LTE   GTD+
Sbjct: 129 PGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGTDL 175

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260
             + S+ +  +DG Y ++G K F+S+   D       ++LA++         +  F+VP+
Sbjct: 176 GILRSKAEPQADGSYRITGTKIFISAGEHDLAENIIHLVLARLPDAPAGTKGISLFVVPK 235

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            + D     G  NG+    +++K+G   NAT  +      G+++G+ N     +  M   
Sbjct: 236 FIPDASGNPGERNGIQCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNA 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIA 363
             L      +    V+   ++ YA+ R                  +I  P ++R +    
Sbjct: 296 ARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQR 355

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAME 417
                  A S+  A   D   S  +EA          ++ P+ K +    A     E M+
Sbjct: 356 AYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFTSTNEGMQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GYI E  + ++ R++  N I  G+     LD+L     G             D+G
Sbjct: 416 VFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLGRKILG-------------DMG 462

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           +  K    I+++ +     ++ +  F+
Sbjct: 463 AKMKAFGKIVQEFVEAEGTNEAMQEFI 489


>gi|307545013|ref|YP_003897492.1| butyryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307217037|emb|CBV42307.1| butyryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 388

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              +WD     P    ++RR+   G            +   +              +   
Sbjct: 27  HAAQWDADSHFPV--EVIRRAGEAGFLGIYTPEEHGGLGLSRLEASLIFEQLAQGCVSTT 84

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             ++       MVA      + + + P + + E                   LTE   G+
Sbjct: 85  AYLTIHNMVTWMVASWGDQALRERYVPAMIAGE-------------ALGSYCLTEPGAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           D A++ ++  +  D  Y ++G K F+S   + +  +++A+  E   G   V  LL     
Sbjct: 132 DAASLRTRAVRDGDD-YVINGSKMFISGAGATEVLVVMARTGEPDSGAGGVSALLVPADA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
            G+ Y + + K+G +S  T  + F +    +   L N   G    MK L    L+ A  S
Sbjct: 191 EGIEYGKNEQKMGWKSQPTRLVSFDDVRVPVGNRLGNEGEGFKFAMKGLDGGRLNIASCS 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  +  Y   R   G  L     ++  IAD+A ++ AA  +    A   D+  
Sbjct: 251 LGAAQHALTLSRDYLAERKQFGRELSSFQALQFKIADMASELTAARLMVRHAAWRLDQQD 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +   +   V  EA++  GG GYI E  + R  R++  + IL 
Sbjct: 311 PE------ATAHCAMAKRFATDVGFNVCNEALQLHGGYGYIREYPLERLVRDTRVHQILE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L     L
Sbjct: 365 GTNEIMRLIAARRL 378


>gi|239625370|ref|ZP_04668401.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239519600|gb|EEQ59466.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 380

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 144/378 (38%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P    L       GLH       +       +++  A     +A+++A
Sbjct: 26  PYVQEADEKGECP--RELFDWGFKMGLHMLEIPAQYGGTGL--SYETTAMIFEELAKVDA 81

Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G+ ++   +  +   V L  TP   + +A  I                    G  LTE  
Sbjct: 82  GYAITFVTTFVALRNVILAGTPEQAQYFADII--------------NRGSFAGFALTEPN 127

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D A I        D  Y L+  K F+++  +SD ++   +     G   +   + D 
Sbjct: 128 AGSDPAGIRGTAVLDGDE-YVLNATKTFITNGALSDIYVGFFKTSPEAGHKGISAFIIDR 186

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G+     +NK+G R + T +L F N       +LG          +   L     A 
Sbjct: 187 NMPGVSVGAHENKMGLRLSNTTDLIFENVRVPRDRMLGPEGSGFKLALNALNLSRAFVAT 246

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++V  M+ +L EA+ YA+ R      +I+  +++  +AD+A+ + A+  L        D 
Sbjct: 247 LAVGIMQRALDEAVKYAKERKQFNTPIINFQMVQALLADMAIKVEASRCLVNNTMRMMDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E         ITK +    A  V + A++  GG GY  E  + +  R+     I
Sbjct: 307 GSLVQKEG-------SITKTFVTDCAQEVTSNAVQVFGGYGYSREYPVEKLMRDVKVFQI 359

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N+L K
Sbjct: 360 FEGTNQIQRMTIANVLNK 377


>gi|330820634|ref|YP_004349496.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327372629|gb|AEA63984.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 393

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 145/407 (35%), Gaps = 35/407 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +++E+L + V +  A+E+A              P     D+ +  P    L R+    G+
Sbjct: 13  EDIEMLRDAVATFAAKEIA--------------PRAAEIDRSDQFPM--DLWRKFGELGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    +    + +
Sbjct: 57  LGMTVSEEYGGTDLGYTAHMVVMEEISRASASVGLSYGAHSNLCVNQINRNGSEAQKRRY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  +  K            W 
Sbjct: 117 LPKLISGEH-------------IGALAMSEPNAGSDVVSMKLRADKRGGHYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ E   G   +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTEPEAGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L    G V+ +   +  + A+++      M   L   + Y   R   G  + +
Sbjct: 224 EVPEENVLGEVGGGVKVLMSGLDYERAVLAGGPTGIMAACLDAVVPYIHDRKQFGQSIGE 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+  +  A  A  + +    D A S        R        +  + A  +
Sbjct: 284 FQLIQGKVADMYTNFQACRAYLYAVGRHLDAAGSGHVRQ--VRKDCAGVILYTAERATWM 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 342 AGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|320326438|gb|EFW82491.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331590|gb|EFW87528.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 592

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 169/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGDYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|218780389|ref|YP_002431707.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761773|gb|ACL04239.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 382

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 143/371 (38%), Gaps = 27/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    L +++   G     +              I AA   + +       
Sbjct: 35  DEWEEQGAFPV--ELYKKAAELGYIGLGFPEELGGQGGDVFLTIVAAEELMRSGSGGFSA 92

Query: 152 MSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              S+  A   +    TP     +               P+ K      LG+TE  GG+D
Sbjct: 93  SLGSLGIALPPIVGHGTPEQKAKFI-------------TPVLKGDRIAALGVTEPSGGSD 139

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +A + +   +  D  Y ++G K F++S      +  A   G  G   +  L+ +    G 
Sbjct: 140 VANLKTTAVRDGDH-YVVNGSKTFITSGTRAHQLTTAVRTGGDGHKGISFLVIESDTPGY 198

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                  K+G  ++ T E+ F N       L+G+ N     + +      L  A+M+   
Sbjct: 199 STSPPMKKMGWWASDTAEIYFDNCRVPVENLIGEENKGFYYIMENFQNERLSLAVMANVT 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +++  E + Y ++R   G  L    V +  + D+A  I A+T  ++R+A   +    + 
Sbjct: 259 AQMAFEECVKYVKQREAFGKTLNAYQVTRHKLVDMATLIEASTEFTYRVAAKMNGGIPQI 318

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E + A       K + C++A  V  +A++  GG GY+    + R YR++   SI  G+ 
Sbjct: 319 KEVSMA-------KNFACQIADKVTFDAVQIFGGYGYMRGHLVERLYRDNRILSIGGGTT 371

Query: 448 NAMVLDVLNLL 458
             M   + N +
Sbjct: 372 EIMKEIISNFI 382


>gi|147906709|ref|NP_001080869.1| short-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|33417079|gb|AAH55986.1| Acads protein [Xenopus laevis]
 gi|54311373|gb|AAH84756.1| Acads protein [Xenopus laevis]
          Length = 409

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P     +R+    GL                 A+ I    +       
Sbjct: 52  PIAAELDQKHRFP--QDQVRQMGQMGLLAVDVPEELGGAGLDYLAYSIGVEEISRGCAST 109

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +   +      +    +    + W     S                     L+E   
Sbjct: 110 GVIMSVNNSLYLGPILKHGSEEQKRQWISPFCSG-------------DKIGCFALSEPGN 156

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   +         W  ++  + A ++LA  +  +    +   L +   
Sbjct: 157 GSDAGAASTTAKLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGISAFLVEMPT 216

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD+  + ++
Sbjct: 217 PGLSLGKKEDKLGIRASSTANLIFEDCR---IPRKNLLGQPGMGFKIAMQTLDAGRIGIA 273

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + + +     A+ YA +R   G  +     ++  +AD+AL + +A  L++R A   D
Sbjct: 274 SQALGIGQAAIDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLLTWRAAMLKD 333

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ S+EAA A++ A        + A  +  +A++ +GG GY+ +    RHYR++    
Sbjct: 334 NKKTFSKEAAMAKLAA-------SEAATQISHQAIQILGGMGYVTDMPAERHYRDARITE 386

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L + N L K
Sbjct: 387 IYEGTSEIQRLVIANQLLK 405


>gi|289582550|ref|YP_003481016.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532103|gb|ADD06454.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 379

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 147/398 (36%), Gaps = 32/398 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             +    +E     N   P    Y   G+       +P    L +++             
Sbjct: 10  EAIRDAVREFGE--NEIKPVAEEYDREGK-------YPL--ELRKKAAEYDFVAPGIPIE 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +      +            A    G  +  +    +M+       + ++W PK+ + E 
Sbjct: 59  YGGAGMDKISSTIVTEELWRADPGIGSAVGSAGFGTNMIIEFGDEWMKEEWLPKVANGE- 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                        A    ++E   G+++A I +  +   DG        W  +  ++D  
Sbjct: 118 ------------TASCSMISEPAHGSNVAGIETVAEADGDGYVLNGNKMWITNGTVADVG 165

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           +++A+     G   +   L +   +G+  +++ NK+G R++   E+   +       ++G
Sbjct: 166 VLMAKTSPDEGHRGITAFLVEMDTDGISTEKIDNKLGIRASDLAEVVVDDVRVPEENVIG 225

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +++     + +         A  +V   + +L  AI YA  R   G  + +   ++  +A
Sbjct: 226 EVDKGFYQLMEFFASGRTSVASQAVGAAQGALDAAIDYAGEREQFGQKIKEFQAIEHKLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  + AA +L++R A   ++          A   + + K +  ++A  V  E ++  G
Sbjct: 286 EMATRVEAARSLTYRAATEVEQNNQDV-----AAQFSSMAKLFASEIAVEVADEGIQVHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GSGY+ +    R+YR++    I  G+       + + L
Sbjct: 341 GSGYVTDYPAERYYRDARITKIYEGTSEIQKNIIADQL 378


>gi|160901416|ref|YP_001566998.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160367000|gb|ABX38613.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 376

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 76/393 (19%), Positives = 143/393 (36%), Gaps = 29/393 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A  +  +     P   RWDK    P    + +     G +       +      
Sbjct: 7   QEMIRDAVRDFVR-TEITPHAARWDKEHHFP--KNVHQGLAALGAYGICVPEEYGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S +    + + +   +    + W              A
Sbjct: 64  YLSLALVLEEIAAGDGGTSTVISVTNCPVNAILMRYGSEAQKQQWL-------------A 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248
           P+ +  +     LTE   G+D +A+ +   +     Y ++G K F++S  + D  I++A 
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTATRDGSD-YVINGVKQFITSGKNGDVAIVIAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +   G   +   +   S  G    RL++K+G  S+ T +++F         L+G     
Sbjct: 170 TDKAAGKRGMSAFIVPTSAPGYQVLRLEDKLGQHSSDTAQIQFEGCRIPAANLIGAEGEG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       +  A  SV   R +   A+ Y++ R   G  + +   +   +AD A  
Sbjct: 230 YRIALSALEGGRIGIAAQSVGMARAAFDCALQYSKERESFGQPIFNHQAVGFRLADCATQ 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +  A+  D      +EAA A       K +  +MA  V + A++ +GG G +
Sbjct: 290 IEAARQLIWHAASLRDAGLPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGVV 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  + R YR+     I  G+ +   + +   L
Sbjct: 343 SDFPVERIYRDVRVCQIYEGTSDVQKILIQRAL 375


>gi|288961576|ref|YP_003451886.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510]
 gi|288913856|dbj|BAI75342.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510]
          Length = 596

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/549 (17%), Positives = 200/549 (36%), Gaps = 67/549 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
               +     + + +  ++  P       EL+G+       +E A++       L+    
Sbjct: 7   PLEDVRFVLDEIVGLDKLSALPGYEDATPELVGQ-----VLEEGAKLCEEVLFPLNQSGD 61

Query: 89  PGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G  ++  +V     +       I  G      D ++      +   I        A L
Sbjct: 62  GEGCHFENGEVRTPKGFKEAYSTYIEAGWQGLACDPAYGGQGLPKLVNIMLEEFICSANL 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G     S+ + + +A+  +  + + + PK+    +  T             + LTE  
Sbjct: 122 SFGMYPGLSLGAYNALAMYGSDELKQRFLPKLVDGTWSGT-------------MCLTEPH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGC 255
            GTD+  I ++     DG + ++G K F+S+   D       ++LA++         +  
Sbjct: 169 CGTDLGIIRTRAVPAGDGSFKITGTKIFISAGEHDLTENILHLVLARLPDAPAGTRGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           FLVP+ + +     G  NG+    +++K+G ++++T  + F +  G+L+G+ +     + 
Sbjct: 229 FLVPKFMPNADGTPGDRNGVACGSIEHKMGIKASSTCVMNFEDATGWLVGEPHKGMRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKR 357
            M     L   I  +    VS   A+ YAR R   G               +I  P ++R
Sbjct: 289 VMMNAARLAVGIQGLGLAEVSYQNAVTYARERLQ-GRSLSGVKAPDKPADPIIVHPDVRR 347

Query: 358 AIADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +         A AL         +A    + ++R +   + ++M PI K     +    
Sbjct: 348 NLLTARAFTEGARALGALTAYKLDVAEKHPDPRTRRDADEFVQLMTPIVKALFTDIGFDS 407

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
              A++  GG G+I E  + ++ R++    I  G+     LD++   L +    L    F
Sbjct: 408 ANIAVQVHGGHGFIWETGVEQYVRDARICQIYEGTNGIQALDLVGRKLPQDVGRLLRHFF 467

Query: 470 STLEQDLGSSGKKV--------ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
             + +D+ ++ +K         +      +               + A A+++  L   G
Sbjct: 468 HPVGRDIEAAMEKDELGEFVMPLAKAFAKLQQATALIAQKGLKDPEEAGAAASDYLRLFG 527

Query: 522 MNDIADVFL 530
           +  +   +L
Sbjct: 528 LVALGWSWL 536


>gi|31982522|ref|NP_031409.2| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Mus musculus]
 gi|16740777|gb|AAH16259.1| Acyl-Coenzyme A dehydrogenase, short chain [Mus musculus]
 gi|74151647|dbj|BAE41170.1| unnamed protein product [Mus musculus]
 gi|74199397|dbj|BAE33217.1| unnamed protein product [Mus musculus]
 gi|148687936|gb|EDL19883.1| acyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Mus
           musculus]
          Length = 412

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 143/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P   A +++    GL                     A      A    
Sbjct: 55  PIAAQLDREHLFPT--AQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRACAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   + +  + W               P           L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSAQQKQQWI-------------TPFTNGDKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  +S  + A ++ A  +       +   L     
Sbjct: 160 GSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA  R+  G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++E+A A++ A        + A A+  +A++ +GG GY+ E    R+YR++    
Sbjct: 337 NKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERYYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|161520015|ref|YP_001583442.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353803|ref|YP_001949430.1| isovaleryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|160344065|gb|ABX17150.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337825|dbj|BAG46894.1| isovaleryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
          Length = 393

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 146/407 (35%), Gaps = 35/407 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +++E+L + V +  A+E+A              P     D+ +  P    L ++    G+
Sbjct: 13  EDIEMLRDAVATFAAKEIA--------------PRAAEVDRTDQFPM--DLWKKFGDLGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    T    + +
Sbjct: 57  LGMTVAEEYGGANMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTAAQKQKY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  +  K  D         W 
Sbjct: 117 LPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTDVDAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L    G V+ +   +  + A++S      M   L   + Y   R   G  + +
Sbjct: 224 EVPEENILGQLNGGVKVLMSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGE 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+     A  A  + +    D A   S+     R        +  + A  +
Sbjct: 284 FQLIQGKVADMYTTFQACRAYLYAVGRHLDSA--GSDHIRQVRKDCAGVILYTAEKATWM 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 342 AGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|66047901|ref|YP_237742.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258608|gb|AAY39704.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 592

 Score =  274 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/481 (19%), Positives = 172/481 (35%), Gaps = 55/481 (11%)

Query: 56  KELELLGEYV----LSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLR 108
            +L  L E V    +    +E  ++ +     L       G  W D V   PA      +
Sbjct: 26  AQLPELAETVDVETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYK 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      +  F  +   +    +   +   A L  G     +  +   +    T 
Sbjct: 86  IYAEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHATE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ELKNKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F++    D       ++LA++         +  FLVP+ +       G  N +  
Sbjct: 193 TGSKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S 
Sbjct: 253 GSIEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YA+ R  S               +I  P ++R +  +        A S  +A   
Sbjct: 313 QAAVEYAQDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQL 372

Query: 381 DEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D AK      +R      A ++ P++K +   +         +  GG GYI E    +  
Sbjct: 373 DIAKFSEDDTARKRADDLAALLTPVSKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           R+     I  G+     LD++     G+N  F QLFS   +   +     ++     +S 
Sbjct: 433 RDVRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFITGSDNALSEFTQPLSK 492

Query: 494 C 494
            
Sbjct: 493 A 493


>gi|264681456|ref|NP_001161107.1| isovaleryl-CoA dehydrogenase, mitochondrial [Sus scrofa]
 gi|262204892|dbj|BAI48026.1| isovaleryl Coenzyme A dehydrogenase [Sus scrofa]
          Length = 426

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 131/380 (34%), Gaps = 28/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 62  EHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITTPVQYGGTGLGYLEHVVVMEEISRA 121

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 122 SGAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 168

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPR 260
           E   G+D+ ++  +  K  D  Y L+G+K W  + P +D  ++ A+ +         +  
Sbjct: 169 ETNAGSDVVSMKLKADKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDLAAVPPSRGITA 227

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIY 317
            + +    G    +  +K+G R + T EL F +     +  L   +  V  +     L  
Sbjct: 228 FIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAVNILGQLSKGVYVLMSGLDLER 287

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A
Sbjct: 288 LVLAGGPLGLMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVA 347

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + DE     ++             +  + A  V  + ++C+GG+GYI +  + R  R++
Sbjct: 348 KACDEGHCTPKD-------CAGVVLYSAECATKVALDGIQCLGGNGYINDFPMGRFLRDA 400

Query: 438 PANSILLGSGNAMVLDVLNL 457
               I  G+     L +   
Sbjct: 401 KLYEIGAGTSEVRRLIIGRA 420


>gi|149375973|ref|ZP_01893740.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359853|gb|EDM48310.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 388

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 78/413 (18%), Positives = 156/413 (37%), Gaps = 46/413 (11%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + + L++L E V    AQE+A              P  E  D     P  + L ++   
Sbjct: 11  GLGETLDMLREQVNGFAAQEIA--------------PRAEAIDHDNLFP--NDLWKKFGD 54

Query: 113 DGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            GL     D ++        AH I    +   +        + S    + +    +    
Sbjct: 55  MGLLGITVDEAYGGSGMGYLAHVIAMEEISRASASVGLSYGAHSNLCVNQINRNGSDEQK 114

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+                L ++E   G+D+ ++    +   D        
Sbjct: 115 EKYLPKLISGEH-------------IGALAMSEPNAGSDVVSMKLSAKDAGDHYVLNGSK 161

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F
Sbjct: 162 MWITNGPDANVYVIYAKTDPSAGPRGITAFIVERDTPGFSQAQKLDKLGMRGSNTCELVF 221

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVS 345
            +         NV  G     K+L+  LD   + +SG     M+ ++   + Y R R   
Sbjct: 222 EDAKVP---KENVMGGEGNGAKVLMSGLDYERLVLSGGPLGIMQAAMDVVVPYIRERKQF 278

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD+   +  A +  + +A S D   +  ++AA A         +  
Sbjct: 279 GQAIGEFELVQGKVADMYTWMNTAKSYVYMVAMSADRGNTTRKDAAGA-------ILYSA 331

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +MA  +  +A++ +GG+GYI E    R  R++    I  G+     + +   L
Sbjct: 332 EMATKLALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|21230718|ref|NP_636635.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769286|ref|YP_244048.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992437|ref|YP_001904447.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21112310|gb|AAM40559.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574618|gb|AAY50028.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734197|emb|CAP52405.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 393

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 131/373 (35%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD     P     + ++   G      D     +  ++                 
Sbjct: 35  PHAARWDAESHFP--REAIGKAAELGFCGLYTDEGVGGLGMRRLDAAIVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  ++A      V   W   + S              +      LTE   G
Sbjct: 93  SAFITIHNMATWLIASYGNDGVRAQWGEAMTSG-------------AKLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 140 SDAASLKTRAQRDGDD-YVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVAADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F++        L     G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGITFTDVRIPAGNLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  EA++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLL 458
           +   M + +   L
Sbjct: 373 TNEVMRMIIARHL 385


>gi|226944607|ref|YP_002799680.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226719534|gb|ACO78705.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 591

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/526 (18%), Positives = 184/526 (34%), Gaps = 60/526 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-----HAYGPGGERWDK--VEFHPAWHALLR 108
             L  L E V + TA  +   A   T +L      +    G  W+   V     +     
Sbjct: 26  ARLPALAETVDTETADAILEEAAKVTGELLAPLNRSGDEEGAHWNDGVVSTPAGFREAYA 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
             I  G      + ++  +   +   ++   +   A        + +      +    + 
Sbjct: 86  TYIEGGWVGLAGNPAYGGLGMPKMLAVQFEEMLYSANASFTLYSALTSGCCLALDAHASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + P+++S E+  T             + LTE   G+D+  + ++ +  +DG Y +
Sbjct: 146 ELKQLYLPRLYSGEWAGT-------------MCLTEAHAGSDLGLLRTRAEPRADGSYAI 192

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP+ L       G+ N L  
Sbjct: 193 SGGKIFITGGEQDLTANILHLVLARLPDAPAGSKGISLFLVPKFLVAPNGELGARNALSC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             L++K+G +++AT  + F    G+L+G+ +     +  M     L   I  +     S 
Sbjct: 253 GSLEHKMGIKASATCVMNFDGATGYLIGEPHKGLAAMFTMMNYERLSIGIQGIGCAEASY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A  YAR R                  ++  P ++R +  +        A S  +A   
Sbjct: 313 QNARAYARERLQGRAPGGARAPQKSADPIVAHPDVRRMLLTMKALTEGGRAFSTYVAQQL 372

Query: 381 DEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           D AK      R    A   ++ PI K +             +  GG GYI E    +  R
Sbjct: 373 DLAKYSEDDERRHAEALVALLTPIAKAFFTDTGLESCIHGQQVFGGHGYIREWGQEQLVR 432

Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           +     I  G+     LD+L   ++  G +        +   L  +           ++ 
Sbjct: 433 DVRIAQIYEGTNGIQALDLLGRKVVANGGDALHAFTGEIRAFL-DAPAASRPFADRLLAA 491

Query: 494 CKEDKGLARFLTEKI----ALASSAAALYRAGMNDIADVFLENRFL 535
            +  + ++ +L E+     AL ++ A  Y      +A  ++  R  
Sbjct: 492 VENLESVSAWLLEQAEQDPALVNAVAVDYLNLFGYVAYAYMWARMA 537


>gi|239817691|ref|YP_002946601.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804268|gb|ACS21335.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 376

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/392 (21%), Positives = 153/392 (39%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE  R A  +  Q   + P   +WD+    P       +  H GL       ++   V +
Sbjct: 7   QEAIRDAVRDFSQAELW-PNAPKWDREHSFP-------KEAHQGLAALG---AYGICVPE 55

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +        L L   LE         ++A  V       +   +      +++      P
Sbjct: 56  EHGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLE----P 111

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQV 249
           + +  +     LTE + G+D +++ +  +K  DG Y + G K F++S  +    I++A  
Sbjct: 112 LAQGRMLGAFCLTEPQAGSDASSLRTTARKDGDG-YVIDGVKQFITSGKNGQVAIVIAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +   G   +   +      G    RL++K+G  S+ T ++ F         L+G      
Sbjct: 171 DKGAGKRGMSAFIVPTDAPGYSVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGY 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +  A  SV   R +   A+ YA+ R   GG + DQ  +   +A+ A  +
Sbjct: 231 KIALGALEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGAIFDQQAVGFRLAECATQL 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D  +   +EAA A       K +  +MA  V + A++ +GG GY+ 
Sbjct: 291 EAARQLIWHAASLRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGYVN 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   L
Sbjct: 344 DFPLERIYRDVRVCQIYEGTSDIQKLLIQRAL 375


>gi|320450391|ref|YP_004202487.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150560|gb|ADW21938.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 577

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/476 (19%), Positives = 180/476 (37%), Gaps = 47/476 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+R++   GL        +  +   +      A         +    + +      +   
Sbjct: 65  LMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEELSGTGGFSVTYGAHTSIGTLPLVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ S E+                  LTE   G+D  A  ++    +DG 
Sbjct: 125 GTEEQKRKYLPKLASGEW-------------IAAYCLTEPGSGSDALAAKTRATLSADGK 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  ++  ++ F + A+V+G          L +    GL +   + K+G ++
Sbjct: 172 HYVLNGVKQWISNAGFANLFTVFAKVDGEH----FTAFLVERDTPGLSFGPEEKKMGIKA 227

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +    +   LG++        ++  +        +V G + +L  +  YA+
Sbjct: 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAKYAK 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--EAAYARI--- 395
            RH  G  +    +++  + ++A  I AA +  +R     DEA    +  EA  A I   
Sbjct: 288 ERHQFGRPIGSFGLIQHKLGEMATRIYAAESAVYRTVGLIDEALQGKKGPEAVMAGIEEY 347

Query: 396 --MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++   V+ E ++  GG GY +E  I R YR++  N I  G+     L 
Sbjct: 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLL 407

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           +  +L     L   L   L     ++ K    +L  S    ++ +       +K+AL  +
Sbjct: 408 IPGML-----LRRALKGQLP-LFQAAMKLQKELLEPSFEEPEDLQAHQVAGLKKLALMVA 461

Query: 514 AAALYRAG---------MNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
             A  + G         +  +AD+ ++    ++       L G    A  +  LYL
Sbjct: 462 GLAAQKYGQKVEEEQEVLGAVADILIDAYAAESALLRARRLGG---VAPAMARLYL 514


>gi|298489175|ref|ZP_07007195.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156312|gb|EFH97412.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 592

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 169/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLVGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|226355964|ref|YP_002785704.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317954|gb|ACO45950.1| putative Acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 388

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P     LR     GL  +     +                   A    
Sbjct: 33  PRAAEFDRSGEYP--REQLRGLAELGLMGATVPEEWNGAGLDSVTYALCLEEIAAADASV 90

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S        M+    T    + +   + S E+                  LTE   
Sbjct: 91  AVIVSVQNGLPEQMILRYGTDTQREKYLKPLASGEH-------------IGAFCLTENSA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A++  + ++  D         W  S   +D ++++A+  G  G   V   + +   
Sbjct: 138 GSDAASLRLRAERDGDSWVLNGSKSWITSGGQADTYLVMART-GESGAKGVSCFIVENGT 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G  ++ T  + F          +     G +  +  L    +  A+ +
Sbjct: 197 PGLSFGKPEEKLGLHASHTTTVNFEGVRVSQENMVGAEGQGLIIALASLDSGRIGIAMQA 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++  A  YA  R   G  L +   +   IA +A  I +   ++ + A   D+  
Sbjct: 257 LGIARAAMEHATRYANEREQFGKKLREFEGVSFKIARMAARIESTRLIALKAAWLKDQGL 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +EA+ A+++A        + A  V  +A++  GG+GY  E  + R YR++    I  
Sbjct: 317 AFGKEASIAKLLA-------SETAVDVTRDAIQVFGGNGYSREYPVERLYRDAKVTEIYE 369

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   + K
Sbjct: 370 GTSEIQQLVISRAVFK 385


>gi|169633254|ref|YP_001706990.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii SDF]
 gi|169152046|emb|CAP00930.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter
           baumannii]
 gi|193077720|gb|ABO12576.2| putative acyl CoA dehydrogenase oxidoreductase protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 378

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 128/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDHWILNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  +   +    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D   
Sbjct: 249 VGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|218781156|ref|YP_002432474.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762540|gb|ACL05006.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 384

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 133/357 (37%), Gaps = 27/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   G     +   +  +       I  A          G  M  +  ++ +V  
Sbjct: 41  KIWKKAGELGFIGLHFPEKYSGMGYGVLENILVAEELCRGDSSIGACMVLAGFASEIVLH 100

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P++              +         TE   G+DI  + +      D 
Sbjct: 101 FGSDAQKEKWLPQV-------------AEAKTLSAGAFTEPGHGSDITGMDTTAVLDGDE 147

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            + ++G K F+++  ++  F  L Q +         +  +L +    G+    + +K+G 
Sbjct: 148 -WVINGTKIFITNGNLAGFFCTLCQTDPDAKPAYRGLSMILVEADREGVSTTSVGDKLGI 206

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R   T E+ F +       L+G        V +      +  A  ++   + +L  A+ Y
Sbjct: 207 RMMDTAEVVFKDVRVPKENLIGVEGKGFYQVLEFFDESRILIAAQALGTAQGALDRAVEY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++R   G  L    + +  +AD+A  +  A  ++++ A ++D+ K   +       +  
Sbjct: 267 VKQREQFGKKLAQFQITQHKLADMATKVELARLMTYKAAWNYDQGKIDPK-------LTS 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + K +  + A  V  EA++ +GG GY+ E  + R YR++    I  G+       + 
Sbjct: 320 MAKMFAARTAVEVADEAIQLLGGYGYMREYDVERFYRDAKITEIYEGTKEIQKNTIA 376


>gi|56963271|ref|YP_175002.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56909514|dbj|BAD64041.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 390

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 134/385 (34%), Gaps = 31/385 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    + ++    GL    +   +        ++ +    +       
Sbjct: 26  PLARELDRDSRFPE--TIFKKMGQLGLLGLPFPEKYGGSGGDTVSYALAVEEIGYACGGT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T    + +               P+ K       GLTE   
Sbjct: 84  GLSYAAAVSLGASPIFYYGTEEQKQTYL-------------VPLAKGESLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDG 265
           G+D     ++     +G Y L+G K ++++ M    +++  V G    G   +   +   
Sbjct: 131 GSDAGGTQTKAV-FENGDYILNGEKCWITNAMYAQTVIITAVTGTQSNGKKRISAFIVPT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R++ T EL   +       LLGD                +  A 
Sbjct: 190 DTPGFTITAPYDKMGVRASNTCELVLEDVRVPESNLLGDPGKGFSQFLYTLDGGRISIAA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++V   + +   A+ YA+ R      +     ++  +AD+A++I  A  +  + A   D 
Sbjct: 250 LAVGIAQAAFDRALAYAKERKQFSKPIGSFQAIQFKLADMAMEIELARNMVHKAAALKDA 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +EAAYA       K +  +MA     +A++  GG GY+ E  + R  R++    I
Sbjct: 310 GAPFGKEAAYA-------KLFASEMATRTCNQALQIHGGYGYMREYEVERMLRDAKLLEI 362

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQ 467
             G+     L +   L  G    +Q
Sbjct: 363 GEGTSEIQRLVIARHL--GLAALQQ 385


>gi|115379923|ref|ZP_01466981.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821597|ref|YP_003953955.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115363074|gb|EAU62251.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394669|gb|ADO72128.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 126/377 (33%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P   +WD+     AW    +++     L        +            A          
Sbjct: 26  PNARKWDETH---AWPTEAVKKLAELSLLGVAVPEQYGGAGLDNVCYAIAMEEISRGCAS 82

Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            G +MS  +      V+        K++     S E                  GLTE  
Sbjct: 83  TGVIMSVNNSLYCDPVSKYGNEEQKKEFLTPFASGE-------------KLGCFGLTEPE 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D AA  +   +  D         W  + P +DA ++        G   +   +   +
Sbjct: 130 AGSDAAAQQTVAVRRGDEYVINGSKNWITNGPKADAIVLFTMTNKEAGNKGITAFIVPTN 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G        K+G  +  +  + F +      +LLG                 +  A  
Sbjct: 190 TPGFIRAEPDKKMGISAAHSCSMFFEDMRVPAKYLLGKEGEGFKVAMSTLDGGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +  EA+ Y+  R   G  + +   ++  +AD+A +I AA  L  + A   D+ 
Sbjct: 250 ALGIARAAFEEAVRYSGERKTFGKPIREHQAIQFMLADMATEIDAARLLVHQAALLKDKG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S E+A A       K +  +MA  V  +A++  GG GY +E    RH R++    I 
Sbjct: 310 VRHSMESAMA-------KLYASEMASRVANKALQVHGGMGYSKEMDAERHVRDARITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 363 EGTSEIQRIVISANLLK 379


>gi|154248192|ref|YP_001419150.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162277|gb|ABS69493.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 390

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 141/396 (35%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     + ++      P     D+    P    L  +    GL     +  +  
Sbjct: 12  DLGETADMLRDTVRSFSDAEIAPRAAEIDRTNQFP--RDLWPKLGALGLLGVTAEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + ++   T      + PK+ S E+  
Sbjct: 70  SGLGYLEHVIAMEEISRASASVGLSYGAHSNLCINQISRNGTAEQKAKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++ ++  K  D         W  + P+++  ++
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMRTRADKKGDRYILNGSKMWITNGPIAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPAAGPKGMTAFLVERDFPGFSTAQKLDKLGMRGSDTGELVFQDCEVPEENVLGAV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++      M+  +   + Y   R   G  +    +M+  IAD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAGGPTGIMQACMDIVLPYVHERKQFGQPIGTFQLMQGKIADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A  A  + +A + D   +  E+AA A         +  + A  +  EA++ +GG+
Sbjct: 297 YVTMNATKAYVYAVAKACDRGATTREDAAGA-------ILYAAEKATWMALEAIQTLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRQL 385


>gi|299529435|ref|ZP_07042872.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298722298|gb|EFI63218.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 376

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 140/395 (35%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  +     P   RWDK    P    + +     G +            
Sbjct: 5   QDQEMIRDALRDFVR-EQITPHAARWDKEHEFP--KDVHQGLAALGAYGICVPEELGGAG 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                                 ++S +    + + +        + W             
Sbjct: 62  LDYVSLALVLEEIAAGDGGTSTVISVTNCPVNAILMKYGNASQQEQWL------------ 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIML 246
             P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D  I++
Sbjct: 110 -RPLAQGQMLGAFCLTEPHVGSDASALRTTAVRDG-GDYVINGVKQFITSGKNGDVAIVI 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A  +   G   +   +      G    RL++K+G  S+ T ++ F N       L+G   
Sbjct: 168 AVTDKTAGKKGMSAFIVPTGNPGYQVARLEDKLGQHSSDTAQINFENCRIPAANLIGAEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  SV   R +   A+ Y++ R   G  + +   +   +A+ A
Sbjct: 228 EGYKIALSALEGGRIGIAAQSVGMARAAFECALQYSKERESFGQPIFNHQAVGFRLAECA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +  A+  D      +EAA A       K +  +MA  V + A++ +GG G
Sbjct: 288 TQIEAARQLIWHAASLRDAGLPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + +  + R YR+     I  G+ +   + +   L
Sbjct: 341 VVSDFPVERIYRDVRVCQIYEGTSDVQKILIQRAL 375


>gi|295696336|ref|YP_003589574.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411938|gb|ADG06430.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 76/375 (20%), Positives = 145/375 (38%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  + W++    P   ++LRR    G     +              I  A          
Sbjct: 28  PYVDEWEEQGEFP--KSILRRMGELGFLGLRYPEEVGGQGGDYFSSIVMAEELARCGAGG 85

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +  +   +    TP   K +               P  +      LG+TE  
Sbjct: 86  FPMAVAVQTEMATPPILKFGTPEQKKQFLE-------------PALRGEKLACLGITEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A I ++ ++  DG        +  + P +D   ++A+     G   +   L +  
Sbjct: 133 HGSDVAGIETRARREGDGWVIRGRKLFITNGPRADFITLVARTSDEPGYRGISLFLVEMD 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+   R  +K+G RS+ T EL F + +     LLG+       +        + +A  
Sbjct: 193 RPGVSVGRKLDKVGMRSSDTAELVFDDVWVPAESLLGEEGKGFYQIMWELQGERMIAAAG 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+  + +   A+ YA+ R   G  +    V+   +A++A++I A   L++ +A  F   
Sbjct: 253 AVATAQYAHELALAYAKERRQFGRPIAGFQVVSHLLAEMAVEIEACRQLTYSVAWRFARG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S+E + A++ A  T +W       V+  A++  GG+GY+ E  I R +R+   N I 
Sbjct: 313 EVPSKEISMAKLAASQTAFW-------VVDRALQIFGGNGYMAEYPIERLWRDVRLNRIG 365

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 366 AGTDEIMKEIISKEM 380


>gi|153010429|ref|YP_001371643.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562317|gb|ABS15814.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 375

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 139/397 (35%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A     Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIRDAARQFAQ-ERLAPGAAARDREHAFP--RAELAEMGELGFLGMLVPEEWGGSN 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   +  L   T    K + PK+ S E+    
Sbjct: 62  LGTVAYALALEEIAAGDGACSTIVSVHSSVGCVPILRFGTEEQKKRFLPKMASGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ ++  D        ++  S       I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARRDGDHYVIDGSKQFITSGKNGSVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPSAGKKGISAFIVPTDTPGYEVVSVEHKLGQHSSDTCALAFTNMRIPV---ENRLGD 225

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +  KI L  L+   + ++   V +       A  YA+ R   G  +I+   +   +AD
Sbjct: 226 EGQGYKIALANLEGGRIGIAAQSVGMARAAFEAACAYAKERITFGKPIIEHQAVSFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        KMA  V + A++  GG
Sbjct: 286 MATKIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SKMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|39935206|ref|NP_947482.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649057|emb|CAE27578.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 379

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/374 (24%), Positives = 145/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P    WD+    P    L  ++   GL    +   +      Q   I A   L   A   
Sbjct: 28  PFATEWDEAGGFP--RELYEKAAAIGLLGLGFPEEYGGTPCDQFMWIVATQELARAAAGG 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++     A  +A   +P +     P+I S                   L +TE  G
Sbjct: 86  VSASLNSHSIGAPPIARAGSPELKARVLPEILSG-------------KKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVSLLLIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL    LK K+G  ++ T  L F N        L     G +  M       L  A   
Sbjct: 192 PGLTRTPLK-KMGWWASDTATLHFDNCRVPAANLLGTEGAGFMIIMMNFNSERLTMAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  +V L EA  YAR+R   G  L+   V++  + D+A  IAA+ A+   LA   D+ +
Sbjct: 251 IAASKVCLDEATEYARQRVTFGKPLVKHQVIRHKLVDMAQKIAASQAMLELLAWRVDQGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   E    +  A  T  +C        +EA++  GG+GY+    + R YR+   N+I  
Sbjct: 311 SPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGYMRGVKVERIYRDVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|83648023|ref|YP_436458.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636066|gb|ABC32033.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 599

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/541 (17%), Positives = 182/541 (33%), Gaps = 66/541 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHPAWHALLRRSIHDGLHC 117
            ++    QE A+        L      G+        D V     +    ++ +  G   
Sbjct: 37  DMVDAIIQEGAKFCEQ---VLSPLNRVGDEEGCTWSEDGVTTPTGFKEAYQQYVEGGWPS 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 F      ++  +  + +   +    G     S  + + V L  +      + PK
Sbjct: 94  MTAPEDFGGQGLPESLGLVMSEMVGSSNWAWGMYPGLSHGAVNTVILHGSEEQKAMYLPK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   G+D+  + S+ +  +DG Y ++G K F+S+
Sbjct: 154 LVSGEWTGT-------------MCLTEPHCGSDLGILRSKAEPNADGSYSITGTKIFISA 200

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       I LA++         +  F+VP+ L +     G  N +    +++K+G 
Sbjct: 201 GEHDMAENIVHICLARLPDAPQGTKGISLFIVPKFLVNEDGSLGERNSVTCGSIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             N+T  + F    G+L+G  N     +        L +AI  +S   +S   A+ YA+ 
Sbjct: 261 HGNSTCVMNFDGAKGYLIGPENKGLACMFTFMNFARLGTAIQGLSASELSFQGALTYAKD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EA 383
           R                  +I  P ++R +         + AL +  A   D        
Sbjct: 321 RLAMRSLSGVKNPNGPADPIIVHPDVRRMLLTQKAFTEGSRALIYYTAVQGDFVHHGATE 380

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R+E       + PI K +  ++        M+  GG G+I E  + +  R++    + 
Sbjct: 381 EVRNEADELMGFLTPIAKAFLTEIGYESANLGMQVYGGHGFISEWGMEQIVRDTRIALMY 440

Query: 444 LGSGNAMVLDVLNL---------LEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISL 493
            G+     LD+L           L++ T L         ++   +   + +  L      
Sbjct: 441 EGTTGIQALDLLGRKILMTQGESLKRFTKLVHVFCKEQAENADMNEFVEPLAKLNKEWGD 500

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
                G+A         A+S   L  +G   +A  +     +             F  A 
Sbjct: 501 LTMKIGMAAMKNRDEVGAASVDYLMYSGYAVLAYFWARMALVAQQKLAEGTTETGFYTAK 560

Query: 554 I 554
           +
Sbjct: 561 L 561


>gi|302382986|ref|YP_003818809.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193614|gb|ADL01186.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 379

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 138/402 (34%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   + +   A      +L  +      WD+ +  P    ++RR+   G       
Sbjct: 2   DFALTDDQRAIQDAARAFADAELAPHSA---EWDETKHFPV--DVMRRAAETGFAAIYTG 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +              +     +S    +  M+    +  +   + P++ + 
Sbjct: 57  EEHGGMALGRVEAAVIFEELSRGDVSTAAFISIHNMATWMIDRFGSDDLRARYVPRLATM 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +     LTE   G+D AA+ +      D         +   +  SD
Sbjct: 117 E-------------LIASYCLTEPGSGSDAAAMRTSATLDGDTWVLNGSKAFISGAGTSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++A+  G  G   +   + +    GL +   + K+G  S  T  ++F +       L
Sbjct: 164 VYVVMART-GEPGPKGISAFVVEKGTPGLSFGAQEKKMGWNSQPTAIVQFDDCRVPAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  S+ G R++L  A  Y   R   G  L +    +  
Sbjct: 223 LGKEGDGFRYAMMGLDGGRLNIAACSIGGARLALETAQTYVASRKQFGKALAEFQNTQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  +  R A + D           A     + K         +  EA++ 
Sbjct: 283 LADMATALEAARLMVLRGAWALDTRHPE------ATKWCAMAKRMATDACFDIADEALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY+++  + R  R+   + IL G+   M +     + +
Sbjct: 337 HGGYGYLKDYPLERIVRDLRVHRILEGTNEIMRVITAREMMR 378


>gi|56478072|ref|YP_159661.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314115|emb|CAI08760.1| Acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase
           [Aromatoleum aromaticum EbN1]
          Length = 397

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 130/380 (34%), Gaps = 22/380 (5%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMA 144
              P     D+    PA   L ++    GLH    +  +    +   AH I    +   +
Sbjct: 28  QIAPRAAEVDRTNEFPA--DLWKKLGELGLHGMTVEEEYGGTNIGYLAHIIALEEVSRAS 85

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         K + PK+ S E+                L ++E
Sbjct: 86  ASVGLSYGAHSNLCVNQIRRNGNAAQKKKYLPKLISGEH-------------VGALAMSE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  +  +  D         W  +   +D  ++ A+ +   G   +   + +
Sbjct: 133 PNAGSDVVSMKLRADRRGDRFVLNGAKMWITNGGDADTLVVYAKTDIDAGPRGITAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM 323
               G  +    +K+G R + T  L F +        L       + +K+L+  LD    
Sbjct: 193 KGMKGFTHGTHLDKLGMRGSNTFPLFFDDVEVPEENVLGGVANVGQGVKVLMSGLDYERA 252

Query: 324 SV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +       M   +   + Y   R      + +  +M+  +AD+     A  A  + +  
Sbjct: 253 VLCGGPLGIMAACMDAVVPYLHERKQFNQPIGEFQLMQGKLADMYSTWMATRAYVYAVGQ 312

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D     S+ A   R  A     +  + A  +  EA++ +GG GY  E  + R +R++ 
Sbjct: 313 ACDSLTKMSDHARTLRKDAAGAILYSAEKATWMAGEAIQTLGGVGYTNEYPVGRLWRDAK 372

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 373 LYEIGAGTSEIRRMLIGREL 392


>gi|306845810|ref|ZP_07478378.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306273702|gb|EFM55540.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 375

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D     P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDHEHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+ S E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMASGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|145536399|ref|XP_001453927.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421660|emb|CAK86530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 133/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLYLMAQL 146
           P    WDK    P    +LR     G       +    V   R  A  I  A  Y    +
Sbjct: 48  PYSAEWDKKHHFP--KDVLRELAAMGFSTIYVKQESGGVGLDRLTASVIFEALSY--GDV 103

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                ++     A MV         K W P+  +                     LTE  
Sbjct: 104 TTTAYLTIQNMCAYMVDQFGNEEQKKTWIPRFGT-------------FDAFASYCLTEPN 150

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D   + +  +K  +  Y ++G K F+S   +SD ++++ +         V  +L + 
Sbjct: 151 SGSDSKNMKTFAKKDGND-YVINGSKCFISGGSVSDVYLVMCKT----SEKDVSCILVEK 205

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAI 322
              GL + +L++K+G  ++ T  + F N        L     G    M  L    ++ A 
Sbjct: 206 GTPGLSFGKLEDKMGWNASPTAMVLFDNVRVPQSNLLGKEGNGFKMAMSALDGGRINIAS 265

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G   +      Y   R   G  L     ++   AD+A ++  +  +  + A   D 
Sbjct: 266 CSLGGASFAFDLTKDYLHDRKQFGQPLAAFQGLQFKFADMATNLVTSRLIVRQAAQMIDN 325

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +           + + + K +       +  EA++  GG GY+ E  + R  R+   + I
Sbjct: 326 SHPDK------TLYSAMAKRYATDSCFNLANEALQLHGGYGYLREYQVERIVRDLRVHQI 379

Query: 443 LLGSGNAMVLDVLNLLEK 460
           L G+   M + +   L K
Sbjct: 380 LEGTNEIMKVIISRNLLK 397


>gi|162451125|ref|YP_001613492.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161161707|emb|CAN93012.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 379

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 63/403 (15%), Positives = 134/403 (33%), Gaps = 35/403 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD---GLHCSI 119
           ++ +S   + L   A   T +     P     D+  + P     +   +     GL    
Sbjct: 3   DFSVSEEHKALIDTARRFTKE--RILPIAAECDQKSYFP-----MDVFVEGWNIGLVNPT 55

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               +      +      A        E  +  +   TS     L  TP        K+ 
Sbjct: 56  CPAEYGGPGMGELENALLAE-------ELSYGCTGIQTSFLANGLALTP-------IKLA 101

Query: 180 SREYDPTNKAPMQKTS-VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
             E        M     +      +E   G+D+A + ++  K  D         W  ++ 
Sbjct: 102 GNEDQKKKYLGMLTAEPIMASYCTSEPDAGSDVAGLKTRFTKHGDDYVLNGQKCWITNAS 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
            +  +++ A     +    +   + D    GL   + ++K+G R++ T ++   +     
Sbjct: 162 YARYYVIFATSNPELRHKGIAAFIVDRDTPGLRVGKKEDKLGQRASDTAQVFLDDVKVPK 221

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LL           +       D    +   MR  + E + YA+ R   G  + +  ++
Sbjct: 222 ANLLAPEGQGFKLAMETFNQTRPDIGAAATGLMRRCVDECVAYAKERKTFGQPIGNHQLI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++A+ +     L  + A + D             I++   K +    A     +A
Sbjct: 282 QWMLAEMAIRVEGTRLLYQKAAWNLDHGVRDP-------IVSSFAKAYGADSAMQTAVDA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG+GY++E  + +  R++    I  G+     L +   L
Sbjct: 335 VQVFGGNGYVKEYPVEKMMRDAKVLQIYEGTSQIQRLVIARQL 377


>gi|85712000|ref|ZP_01043054.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85694186|gb|EAQ32130.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 389

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 70/395 (17%), Positives = 147/395 (37%), Gaps = 27/395 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A     +     P     D+    P+   L R+    GL     D  +   
Sbjct: 13  GETADMLREAVNAFARDE-IAPRAAEIDEANEFPS--DLWRKLGDMGLLGLTVDEQYGGS 69

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H I    +   +        + S    + +A        + + PK+ + E+   
Sbjct: 70  GMGYLEHVIAMEEISRASASVGLSYGAHSNLCVNQIARNGNEEQKQKYLPKLCTGEH--- 126

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +K  D         W  + P +D F++ 
Sbjct: 127 ----------VGALAMSEPNAGSDVVSMKLKAEKKGDKYVLNGNKMWITNGPDADVFVIY 176

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   + + +  G    +  +K+G R + T EL F +        L    
Sbjct: 177 AKTDAEKASRGITAFIVEKNTPGFSQAQKLDKLGMRGSNTCELVFEDAEVPAENILGELN 236

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G VE +   +  + A+++   +  M+  L   + Y   R+  G  + +  +++  +AD+ 
Sbjct: 237 GGVEVLMSGLDYERAVLAAGPLGIMQACLDAVVPYIHDRNQFGKAIGEFQLVQGKVADMY 296

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               AA A  + +A S D  ++  ++AA A         +  ++A  +  +A++ +GG+G
Sbjct: 297 TRTNAARAYVYAVAQSCDRGETTRKDAAGA-------ILYAAELATQLALDAIQLLGGNG 349

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E    R  R++    I  G+     + +   L
Sbjct: 350 YINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|78061275|ref|YP_371183.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77969160|gb|ABB10539.1| isovaleryl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 414

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 131/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 49  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVAEEYGGANMGYTAHMVAMEEISRA 106

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 107 SASIGLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------IGALAMS 153

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +       +   + 
Sbjct: 154 EPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGITAFIV 213

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L    G V+ +   +  + A++
Sbjct: 214 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVLMSGLDYERAVL 273

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 274 SGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 333

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 334 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 391

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 392 EIGAGTSEIRRMLIGREL 409


>gi|260549383|ref|ZP_05823602.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260407492|gb|EEX00966.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 378

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/373 (20%), Positives = 134/373 (35%), Gaps = 28/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    PA   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFPA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLVCGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +AI  + ++  D  + L+G K F++S   +   ++ A  + + G   +   L   +
Sbjct: 129 GSDASAILCKAERDGD-YWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTN 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             G    R+++K+G  ++ T  +   +    L   +     G    +  L    +  A  
Sbjct: 188 TQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D  
Sbjct: 248 SVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I 
Sbjct: 308 LPCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIY 360

Query: 444 LGSGNAMVLDVLN 456
            G+ +   L +  
Sbjct: 361 EGASDIQRLVIAR 373


>gi|262374895|ref|ZP_06068129.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145]
 gi|262309908|gb|EEY91037.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145]
          Length = 593

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 86/534 (16%), Positives = 190/534 (35%), Gaps = 58/534 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRS 110
            ++ L  L         +E+A+ + N   P        G + +   V     +    ++ 
Sbjct: 27  ANENLAHLDAATAEAILEEMAKFSQNVMLPLNRTGDEEGAKIENGNVTTPAGFKEAFKQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +      +   + +  +              SV +   +    +   
Sbjct: 87  AEGGWIGLGADMEWGGQEMPKMLTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQAQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y +SG
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYSISG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N +    
Sbjct: 194 TKIFITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSIGERNPVGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           A  YA  R                  ++    ++R + ++  +  A+ A +  +    D 
Sbjct: 314 AAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDI 373

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                + ++  +      ++ PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGLEQCIRD 433

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
              + I  G+      D++    ++ G     +  S + +D  +S    +  ++D+ +  
Sbjct: 434 LRISQIYEGTNGVQSQDLIGRKTIKCGGEYISEYISEI-RDFANSLDADLNFIKDATLDA 492

Query: 494 CKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
             E + + +++ E         ++ A  Y   +  ++  ++  R  +   +   
Sbjct: 493 ATEVESVTQYILEAARESHDFPNATAVDYLHAVGLLSFSYMFARIANAAKNKEG 546


>gi|78224480|ref|YP_386227.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
 gi|78195735|gb|ABB33502.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15]
          Length = 390

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 133/382 (34%), Gaps = 26/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P    L  +    GL        +         H I    L   
Sbjct: 28  KEITPRATDIDRDNHFPM--DLWPKMGQLGLLGVTVSEEYGGAAMGYLEHVIAMEELSRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S E+                L ++
Sbjct: 86  SASVGLAYGAHSNLCVNQIFRNGNESQRRKYLPKLISGEH-------------VGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P +D  ++ A+ +   G   +   L 
Sbjct: 133 EPGAGSDVVSMRLRADKKGDRFILNGNKMWITNGPHADTLVVYAKTDMNAGPRGITAFLI 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F N        L      V  +   +  + A++
Sbjct: 193 EKGFKGFSTAQKLDKLGMRGSDTCELVFENCEVPEENILGGVGRGVNVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   +  M+  +   + Y   R      +    +M+  IAD+   + A+ A  + +AN+ 
Sbjct: 253 ASGPLGIMQACMDVVVPYLHERKQFDQPIGQFQLMQGKIADMYTTLNASRAYVYAVANAC 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              ++  ++ A A         +  + A  +  EA++C+GG+GYI E    R  R++   
Sbjct: 313 TRGETSRKDCAGA-------ILYAAEKATWMALEAIQCLGGNGYINEYPTGRLLRDAKLY 365

Query: 441 SILLGSGNAMVLDVLNLLEKGT 462
            I  G+     + +   L + T
Sbjct: 366 EIGAGTSEIRRMLIGRELFEET 387


>gi|291443305|ref|ZP_06582695.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346252|gb|EFE73156.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 390

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 141/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD     +    P+   ++L  L   ++S              P+       G       
Sbjct: 2   SDRAPQPVERRLPTEESRQLVALVRDIVSKEI----------APRAAEEEEAG------- 44

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    +       GL    +  +     +     ++       A+L  G  +S    +
Sbjct: 45  VFP--REVFTLLSEAGLLGLPYGSAHGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T        P + S               +     L+E   G+D A++ ++ 
Sbjct: 103 CHALAGYGTDAQQAAHLPAMLSG-------------GLLGAYCLSEPASGSDAASLRTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D   +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGDDWVITGTKAWITHGGVADFCTVLART-GVEGARGITAFLVPGDAEGLNAALPEKK 208

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  ++   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRVGDDRRIGEEGQGFAIALSALDSGRLGIAACAIGVAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D  +  S +AA A  
Sbjct: 269 VRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRALYLEAARLRDAGEPFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A  V  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|170723991|ref|YP_001751679.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169761994|gb|ACA75310.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 601

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 183/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +     + +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDLEGCTWSESGVKTPTGFKQAYEQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   +    G     S  + + ++   T    + +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLALSEMVGESNWSWGMYPGLSHGAMNTISAHGTAEQQETYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYRISGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  NG+    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNGVTCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F +  G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDSATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +      G + +    + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGNEAVKEFVEPLAAINKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|195112096|ref|XP_002000612.1| GI22432 [Drosophila mojavensis]
 gi|193917206|gb|EDW16073.1| GI22432 [Drosophila mojavensis]
          Length = 406

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 145/380 (38%), Gaps = 32/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G    ++D+   +P   A +++    GL                     A          
Sbjct: 48  GENAAKFDREHLYPG--AQIKKMGELGLMAVSVPEELGGTGLDYLAYAIAMEEISRGCAS 105

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG +MS + +      L          +     + E                   L+E  
Sbjct: 106 AGVIMSVNNSLYLGPLLGFGNDAQKAAYITPYTTGE-------------RVGCFALSEPG 152

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A ++   + SD         W  ++  ++A ++ A    ++    +   + D  
Sbjct: 153 NGSDAGAASTVATEKSDRYVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGISAFIVDKG 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G R ++T +L F +     +   N+  G     KI +  LD+  + +
Sbjct: 213 IKGFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENLLGGTGLGFKIAMQTLDAGRIGI 269

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +G  + +A+     A+ YA++R   G  +     +++ IAD++L + +A  L++R A   
Sbjct: 270 AGQALGIAQASLELAVDYAQKRQAFGKPISKLQAIQQKIADMSLAVESARLLTWRAAWLK 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++   
Sbjct: 330 DNKLPYTKEAAMAKLAASEAATLC-------AHQCIQVLGGMGYVTDMAAERHYRDARIT 382

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L V   + K
Sbjct: 383 EIYEGTSEIQRLVVAGSVIK 402


>gi|221069265|ref|ZP_03545370.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714288|gb|EED69656.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 380

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 151/405 (37%), Gaps = 39/405 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  +     P   RWDK    P       + +H GL          P  
Sbjct: 5   QDQEMIRDALRDFVR-EQITPHAARWDKEHEFP-------KEVHQGLAALGAYGICVPEE 56

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS------MVALMTTPRVHKDWAPKIFSRE 182
              A     +   ++ ++ AG   + +V S +      ++         + W        
Sbjct: 57  LGGAGLDYVSLALVLEEIAAGDGGTSTVISVTNCPVNAILMKYGNAGQQEQWL------- 109

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                  P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D
Sbjct: 110 ------RPLAQGQMLGAFCLTEPHVGSDASALRTTAVRDG-GDYVINGVKQFITSGKNGD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             I++A  +   G   +   +      G    RL++K+G  S+ T ++ F N       L
Sbjct: 163 VAIVIAVTDKAAGKKGMSAFIVPTRNPGYQVARLEDKLGQHSSDTAQINFENCRIPAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G                 +  A  SV   R +   A+ Y++ R   G  + +   +   
Sbjct: 223 IGAEGEGYRIALSALEGGRIGIAAQSVGMARAAFECALQYSKERESFGQPIFNHQAVGFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD A  I AA  L +  A+  D      +EAA A       K +  +MA  V + A++ 
Sbjct: 283 LADCATQIEAARQLIWHAASLRDAGLPCLKEAAMA-------KLFASEMAERVCSAAIQT 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GG G + +  + R YR+     I  G+ +   + +   L   T 
Sbjct: 336 LGGYGVVSDFPVERIYRDVRVCQIYEGTSDVQKILIQRALATSTG 380


>gi|39935374|ref|NP_947650.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649226|emb|CAE27746.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 375

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 126/349 (36%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK 172
           G    +   ++            A             ++S   + A M  L   T    +
Sbjct: 47  GFLGMLVPEAYGGSETGMVAYTLALEEIAAGDGACSTIVSVHSSVACMPILKFGTEEQKQ 106

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+               G  LTE + G+D + + +  ++  D        +
Sbjct: 107 RFLPKLASGEW-------------IGGFALTEPQAGSDASNLRTTARRDGDHYVINGAKQ 153

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  S       I+ A  +   G   +   +      G    R+++K+G  S+ T +L F+
Sbjct: 154 FITSGQNGQLIILFAVTDPSAGKKGITAFIVPTDTPGYEVVRVEDKLGQHSSDTCQLAFN 213

Query: 293 NTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +        LG                 +  A  +V   R +   A  YAR R   G  +
Sbjct: 214 DMRIPADLRLGAEGEGLKIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+   +   +AD+A  IAAA  +    A+  +       EA+ A       K +  + A 
Sbjct: 274 IEHQAVAFRLADMATRIAAARQMVLYAASLREAGLPCLTEASMA-------KLFASETAE 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           AV + A++ +GG GY+++  + R YR+     I  G+ +   + +   L
Sbjct: 327 AVCSSAIQTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRIVIARNL 375


>gi|304321110|ref|YP_003854753.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303300012|gb|ADM09611.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 594

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 87/445 (19%), Positives = 169/445 (37%), Gaps = 56/445 (12%)

Query: 73  LARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L   + ++   L      G+     R D   V     +    ++    G      D  + 
Sbjct: 42  LEEASKWHRDVLAPLNRVGDTEGCTRHDDGSVTTPTGFKDAYKQFSEAGFMSIAMDPEYG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                   +   A +   A          S  +   + +  +    + + PK+ S E+  
Sbjct: 102 GQGLPLVLQYAVAEMTSSANQAFAMYPGLSGGAWRAIYMNGSDEQKEKYLPKMTSGEWTG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--- 242
           T             + LTE + GTD+  I ++ +   DG Y +SG K ++S+   D    
Sbjct: 162 T-------------MNLTEPQCGTDLGLIRTKAEPQDDGTYKISGQKIWISAGEHDMSDN 208

Query: 243 --FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              ++LA++ G       +  F+VP+ + +     G  N +    L+ K+G   NAT  +
Sbjct: 209 IIHLVLAKIPGGPDGVKGISLFIVPKFMVNEDGSLGERNNVVCGGLEEKMGIHGNATCVM 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
            +    G+L+G+ +     +  M     L   +  +S   V+   A  +A+ R       
Sbjct: 269 NYDEATGYLVGEEHKGLRAMFIMMNEARLGVGLQGLSAAEVAYQNAAAFAKDRLQMRSIS 328

Query: 348 ----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------A 391
                      +I  P ++R + D  +    A  L++  A   D A    +EA       
Sbjct: 329 GTKAPDQPADPIIVHPDVRRMLLDTRVFTEGARMLTYWAALHEDLAHKSEDEATRQKAKD 388

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           Y  ++ PI K +          ++M+  GGSGY+EE  +++  R++    I  G+     
Sbjct: 389 YMGLLTPIIKAFNTHKGFEGTCDSMQVFGGSGYVEEWGMSQFLRDTKIAMIYEGTNGIQA 448

Query: 452 LDVLN--LLEKGTNLFEQLFSTLEQ 474
           LD++   L+ +G  L++  F  +++
Sbjct: 449 LDLVGRKLMAEGGRLWQTFFKEVDE 473


>gi|294341208|emb|CAZ89609.1| Acyl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 598

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/543 (19%), Positives = 194/543 (35%), Gaps = 78/543 (14%)

Query: 29  PLFIGMNAYSSDSLLVA--LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           P    M  +    +L A  L+   P     +       +++   +E  +  +     L+A
Sbjct: 6   PPLRDM-QFVMHEVLDATTLLKELPPYAEVD-----ADLINQVCEEAGKFCSEVLQPLNA 59

Query: 87  Y-GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
                G  +D     V     + A   + +  G      D  F        H + +A   
Sbjct: 60  SGDAEGCHYDAATRTVTTPKGFKAAWDQFVQAGWTSLTADAEFGGQGLP--HLVGSAVHE 117

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +         M P +T      L    +      + PK+ + E+  T             
Sbjct: 118 MQNAANQAWTMYPGLTQGVTELLNAHGSAEQKALYMPKLVAGEWTGT------------- 164

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   GTD+  I ++    +DG Y L+G K F+SS   D       ++LA++     
Sbjct: 165 MCLTEPHCGTDLGLIRTKAVPQADGSYKLTGQKIFISSGEHDLADNIIHMVLAKLPDAPE 224

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+ +       G  NG+    +++K+G  +N+T ++   +  G+++G+ N
Sbjct: 225 GSKGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPN 284

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  M     L   + S+    V+   A+ YAR R                  ++ 
Sbjct: 285 KGLAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILV 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R +            L++ ++   D      +A+ R +      ++ PI K +  
Sbjct: 345 HPDVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFIT 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                   E ++  GG GYI E  + +  R++  N I  G+     LD+L          
Sbjct: 405 DNGLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG--------- 455

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMND 524
                 +  D G+  +K   IL D I     ++ +  F+     LA     L    GM  
Sbjct: 456 ----RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKA 511

Query: 525 IAD 527
           +AD
Sbjct: 512 MAD 514


>gi|71735218|ref|YP_276814.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555771|gb|AAZ34982.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 592

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 168/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGDYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKFPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|295695450|ref|YP_003588688.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411052|gb|ADG05544.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 379

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 134/393 (34%), Gaps = 29/393 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +  +     P     D+    P      ++    G     +   +      
Sbjct: 9   QRMIRDAVRDFAE-GEVAPKAAEVDRTGRFPI--ETFKKMGELGFLGIPFPEEYGGAGGD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 A      A    G   +  ++  S  +    T    +++               
Sbjct: 66  TVSYALAVEEIGRACASTGLSYAAHISLGSYPIYAFGTEAQKREYL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQ 248
           P+ +       GLTE   G+D +   +    + DG + L+G K F+++       ++ A 
Sbjct: 113 PLAQGEGLGAFGLTEPGAGSDASGTRTTAV-LEDGFWRLNGSKNFITNAGYARSVVVTAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +      G        K+G R + TVE     T       L      
Sbjct: 172 TDREKGAKGISAFIVPTDNPGFRVTTTYEKLGLRGSNTVEFVLDETVIPEDHLLGAVGEG 231

Query: 309 VEDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +   I      +    +SV   R +   A+ YA+ R   G  +     ++  +AD+A+ 
Sbjct: 232 YKQFLITLDGGRISIGALSVGIARAAYEAALSYAKERVQFGRSISKFQAIQFKLADMAMH 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  +  + A   D+ +   +EAA A       K +  +MA     +A++  GG GY+
Sbjct: 292 IEMARTMVLKAAWLKDQGRPFKKEAAMA-------KLFASEMAMRTCDQAIQIHGGYGYM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  + R++R+     I  G+     L +   +
Sbjct: 345 KDYPVERYFRDVKLMEIGEGTSEIQRLVIAREI 377


>gi|153836696|ref|ZP_01989363.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149750045|gb|EDM60790.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 384

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPHAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKTEVAQQFSADLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVREGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADIEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L +   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384


>gi|288931930|ref|YP_003435990.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894178|gb|ADC65715.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 395

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 79/396 (19%), Positives = 160/396 (40%), Gaps = 36/396 (9%)

Query: 69  TAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             +E AR  A    P+        E +DK E  P    L +++   G     +   +   
Sbjct: 13  EIKEAAREFAEKEFPK------YAEEFDKKEEFP--FELWKKAAKLGFIGLFFPEEYGG- 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 +   A            L+  S   + M+ L       + + P           
Sbjct: 64  AGYGITEYCLAVEEFWRVDAGLGLILSSTFGSEMILLFGREDQKEKYLP----------- 112

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
             P+ K         TE + G+D+A I +   +  +  + ++G+K F+++  ++D +I+L
Sbjct: 113 --PLAKGEAISCACFTEPQSGSDLAGIKTTA-REENEHFVINGNKIFITNGSIADFYIVL 169

Query: 247 AQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
           A+ + G      +   + +    GL  +++K+K+G R++ T E+ F N       L+G+ 
Sbjct: 170 ARTDKGEKRHHGLSVFVVERGTEGLEARKMKDKLGIRASDTAEVFFKNVKVPKENLIGER 229

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                   +   +  +  A  +V   + +   A+ YA+ R +    LID  + +  +A +
Sbjct: 230 GRGFYQAVEFFNVTRIHVAFQAVGIAQGAFELALEYAKNRELFERKLIDFQMTREKLAKM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I AA  L+++ A  +D+             +  + KY+  K+A   + EA++  GG 
Sbjct: 290 RTEIEAARLLAYQAALYYDKNHKSD------PGLTAMAKYYTAKIAQKAVTEALQIFGGH 343

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++   +I+R YR+     I  G+    +  V N +
Sbjct: 344 GFVS-SAISRMYRDVRVLEIYEGTREVELEIVANSI 378


>gi|114563210|ref|YP_750723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334503|gb|ABI71885.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 598

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 85/437 (19%), Positives = 156/437 (35%), Gaps = 50/437 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSIW 120
            ++     E A++       L+      G  W D V   P  +     + +  G      
Sbjct: 36  DMVDAIIAEAAKLTEQVVAPLNQIGDQQGCTWKDGVVTTPDGFKEAYAQYVEGGWPTLSQ 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              F       +  I  A L+  A          S  + + +    T    + + P +  
Sbjct: 96  SEEFGGQGLPHSLNISIAELFSSANHSFAMYPGLSHGALATIEAHGTEAQKQQFMPSLVE 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  + ++ +  +DG Y LSG K F+S+   
Sbjct: 156 GKWTGT-------------MCLTEPHCGTDLGMLRTKAELQADGTYSLSGTKIFISAGEH 202

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSN 284
           D       I++A++ G       +  F+VP+   +        NG+    +++K+G   N
Sbjct: 203 DLSDNIVHIVIARIPGAPEGNKGISLFIVPKFNVNEDGTISDRNGVSCGSIEHKMGINGN 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G L+G+ N     +        +  A   V+    S   A+ YA+ R  
Sbjct: 263 ATCVINFDGATGHLIGEPNRGLKCMFTFMNAARIGVASEGVAAAEASFQGALAYAKDRLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                           +I  P ++R +           AL   LA   D   +  +EA  
Sbjct: 323 MRSISGVKNPNGPADPIIVHPDVRRMLLTQKSIAEGGRALISYLAQLVDIGHAEKDEAIK 382

Query: 393 ARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A        + PI K +  ++     +  ++  GG G+I+E  + +  R++  + +  G+
Sbjct: 383 ADAETKLALLTPIAKAFLSELGFECTSHGVQIFGGHGFIKEWGMEQLMRDTKISCLYEGT 442

Query: 447 GNAMVLDVLNLLEKGTN 463
                LD+L     GT 
Sbjct: 443 TGIQALDLLARKIIGTQ 459


>gi|300705368|ref|YP_003746971.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299073032|emb|CBJ44389.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
          Length = 393

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 141/396 (35%), Gaps = 24/396 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q     P  E  D+ +  P  AW  +    +   L  ++ +    
Sbjct: 12  GEDIEMLRSAVRDWAQAE-LAPRAEAIDRSDQFPMDAWKQMGDLGV---LGITVAEEYGG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH I    +   +        + S    + +    TP     + PK+ S E+  
Sbjct: 68  ANMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKAKYLPKLVSGEW-- 125

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + ++  D         W  + P  D  ++
Sbjct: 126 -----------VGALAMSEPNAGSDVVSMKLRAERRGDHYVLNGTKMWITNGPDCDVLVV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             + E  +G   +   + +    G    +  +K+G R + T EL F N    +   L   
Sbjct: 175 YGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPVENVLGEE 234

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G    +   +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD+
Sbjct: 235 NGGTRVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A  A  + +  + D      E     R        +  + A  +  EA++ +GG+
Sbjct: 295 YTTLQACRAYLYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGN 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R +R++    I  G+     + +   L
Sbjct: 353 GYINEFPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|6981112|ref|NP_036724.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Rattus
           norvegicus]
 gi|125052|sp|P12007|IVD_RAT RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|204982|gb|AAA41454.1| isovaleryl-CoA dehydrogenase precursor (EC 1.3.99.10) [Rattus
           norvegicus]
 gi|56970429|gb|AAH88401.1| Isovaleryl coenzyme A dehydrogenase [Rattus norvegicus]
 gi|149022989|gb|EDL79883.1| isovaleryl coenzyme A dehydrogenase, isoform CRA_a [Rattus
           norvegicus]
          Length = 424

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+           ++    G+        +         H +    +   +   
Sbjct: 64  PKAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 124 GLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEF-------------IGALAMSEPNA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +         +   + + 
Sbjct: 171 GSDVVSMRLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDLTAVPASRGITAFIVEK 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +            +     +     L  L  A 
Sbjct: 231 DMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAG 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A + DE
Sbjct: 291 GPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDE 350

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +++             +  + A  V  + ++C+GG+GYI +  + R  R++    I
Sbjct: 351 GHITAKD-------CAGVILYTAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI 403

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 404 GGGTSEVRRLVIGRA 418


>gi|328470877|gb|EGF41788.1| branched-chain acyl-CoA dehydrogenase [Vibrio parahaemolyticus
           10329]
          Length = 384

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 146/408 (35%), Gaps = 30/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+      A +A     Q     P    WD+    P    +LR++   G        
Sbjct: 2   DFELNEDQLAFAEVAKQFADQ--MLAPHAAEWDENHHFP--KDVLRQAGELGFLSIYTPP 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M        M+    +  M+       V + ++  + S E
Sbjct: 58  EHGGLGLSRLDAAIIFEQLAMGCTATTAFMTIHNMATWMITSFAKTEVAQQFSADLISGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D A++T+   +  D    L+G K F+S    +D
Sbjct: 118 -------------KLASYCLTEPNAGSDAASLTTSAVRDGDEF-VLNGAKVFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   V   +      G+ Y + + K+G     T  + F N      +L
Sbjct: 164 VLVVMARSCGE-GAGGVSAFVVPADIEGISYGKKEAKMGWNCQPTRMITFENVRIPADYL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                ++ A  SV   + +L EA  Y   R   G  L     ++  
Sbjct: 223 LGEEGEGFKFAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA  +    A   D   +             + K +   +   V  +A++ 
Sbjct: 283 LADMATELVAARQMVRLAAAKLDAQHAEKSA------YCAMAKRFATDVGFKVCDQALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465
            GG GYI+E  + RH+R+   + IL G+   M L V   LL +G  L 
Sbjct: 337 HGGYGYIKEYPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384


>gi|148265079|ref|YP_001231785.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398579|gb|ABQ27212.1| butyryl-CoA dehydrogenase [Geobacter uraniireducens Rf4]
          Length = 402

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 142/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P    L+++    G   S     +        ++ I    +       
Sbjct: 49  PIAMQIDEEHMIPD--ELVKKMGEMGFLGSYLPDEYGGAGLDMLSYAIVVEEVSKACGSS 106

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    + W P + + E             +     LTE   
Sbjct: 107 GVLISAHTSLACGPIYTFGTEEQKQKWLPALNTGE-------------IIGCFLLTEPDA 153

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  AI++  ++  +    ++G K F+++       ++ A  +  +    V   + D  
Sbjct: 154 GSDAGAISTTYKRDGNDF-VINGSKIFITNGGYKGTGVLFATHDKSLKHKGVSAFIIDLQ 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + + K+G R + T      N         N+     +  KI +  L+   + +
Sbjct: 213 SPGVEILKNEKKLGIRGSYTTAFALDNVRIPA---ENLLGQEGQGFKIAMDTLNGGRIGI 269

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  + D   ++  +AD+   I  +  ++++ A   
Sbjct: 270 ASQALGIAEGAFERALAYSKERKQFGAPICDLQAIQFKLADMWARIETSKLMTYKAACLK 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  KS + E+A  +++A     +  K       EA++  GG G+I +  + R YR++   
Sbjct: 330 DAKKSYTMESAMCKMLASEAATYVTK-------EAIQIHGGYGFIVDYEVERMYRDAKIT 382

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +  +L
Sbjct: 383 EIYEGTNEVQRVVISKML 400


>gi|85708606|ref|ZP_01039672.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1]
 gi|85690140|gb|EAQ30143.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1]
          Length = 601

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 90/477 (18%), Positives = 168/477 (35%), Gaps = 59/477 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +       +  G         F        H +        A       M P +
Sbjct: 73  VTTPPGFKEAYDAYVEAGWGTLAKPEEFGGQNLP--HVLGFVVEEFTAAANQAFGMYPGL 130

Query: 157 TSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T+ +  A+    +    + + PK+ S E+  T             + LTE   GTD+  I
Sbjct: 131 TNGATAAIEAAGSQEQKETYLPKMISGEWSGT-------------MNLTEPHCGTDLGMI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL- 262
            ++ +  +DG + ++G K F+S+   D       ++LA+  G       +  F+VP+ + 
Sbjct: 178 RTKAEPQADGSFKITGTKIFISAGEHDLTSNIIHLVLAKTPGAPDSAKGISLFIVPKYIL 237

Query: 263 ----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E G  NG+    ++ K+G   N+T  L +    G+++G+ N     +  M     L
Sbjct: 238 DENGEPGERNGVVCGSIEKKMGIHGNSTCVLNYDEATGYMVGEENKGLAAMFVMMNAARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              I  ++   VS    ++YA  R                  +   P ++R + D  +  
Sbjct: 298 GVGIQGLAQAEVSYQNGVNYALDRRQGRALTGPADKDSKADPIFVHPDVRRMLMDAKVFN 357

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               AL    A   D        + R        +M P+ K +       +     +  G
Sbjct: 358 EGMRALCLWGALQVDLTHKAQTEEERQLADDLIGLMTPVIKGYGTDKGYDIANNMQQVYG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478
           G GYI E  + +  R++    I  G+     +D+    L  KG    +  F  L+ ++  
Sbjct: 418 GHGYISEWGMEQFVRDARIAMIYEGTNGVQAMDLCGRKLASKGGRAIQAFFKMLDDEISE 477

Query: 479 S-GKKVITILRDSISLCKEDKGLARFLTEKIALA-----SSAAALYRAGMNDIADVF 529
           + G + +  L + +     ++  A     + A+A      + A  Y   M  +   F
Sbjct: 478 AKGNEALAPLAEKLEKALGEQKQATMWFMQNAMANPNHLGAGAHHYMHIMGIVTLGF 534


>gi|255319400|ref|ZP_05360616.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255303536|gb|EET82737.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 600

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 89/488 (18%), Positives = 173/488 (35%), Gaps = 64/488 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E +   ++    +  A         L+      G  W D V   P  +    ++ I  G 
Sbjct: 33  ENVSRDLVDQYLEAAADFCENELSPLNQIGDREGCSWNDGVVTTPTGFKEAYQKYIELGF 92

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +  +       +  I  + +   +    G     S  +   +    +    + + 
Sbjct: 93  PSLSAEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSDEQKEIYL 152

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+
Sbjct: 153 PKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFI 199

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G       +  F+VP+   +     G  N +    +++K+
Sbjct: 200 SAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEHKM 259

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + F    G+L+G  N     +        + +A+  ++    +   +I YA
Sbjct: 260 GIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIVYA 319

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P ++  +           AL + LA   D  +  +
Sbjct: 320 KDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEKGA 379

Query: 388 EEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            E           ++ PI K +  +       + ++  GG G+I E  + +  R++    
Sbjct: 380 TEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRIAC 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD+L     GT              G+  K    I+       K++  LA
Sbjct: 440 LYEGTTEIQALDLLGRKVLGTQ-------------GAMLKDFTKIIHKFAEANKDNAELA 486

Query: 502 RFLTEKIA 509
           +F+ E +A
Sbjct: 487 QFI-EPLA 493


>gi|70732970|ref|YP_262743.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347269|gb|AAY94875.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 598

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/451 (19%), Positives = 162/451 (35%), Gaps = 55/451 (12%)

Query: 55  HKELELLGE-----YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHAL 106
           H     LG       ++S   +E A+        L+      G  +D   V     +   
Sbjct: 22  HASYAALGATDASPDMVSAILEEGAKFCENVLAPLNRSGDEEGCHFDNGVVTTPKGFKQA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             + +  G H    D ++       +  +  + +   +    G     +  + S +    
Sbjct: 82  FAQYVEGGWHGLAADPAYGGQGLPHSLGLVISEMVGSSNTSWGMYPGLTHGAMSAIHAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + +  K+ + ++  T             + LTE   GTD+  I ++    +DG Y
Sbjct: 142 SAEQKQLYLGKLTAGQWTGT-------------MCLTEAHCGTDLGIIKTRAVPQADGSY 188

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGL 270
            ++G K F+S+   D       ++LA++         +  F+VP+ L D     G  NG+
Sbjct: 189 AVTGSKIFISAGEHDMSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAAGEAGERNGV 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  L F    GFL+G  N     +  M     L + +  +     
Sbjct: 249 SCGSIEHKMGIKASATCVLNFDGARGFLIGQANKGLNCMFTMMNHARLGTGMQGLCLGET 308

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   AI YA  R                  +I  P ++R +  +        AL++  A 
Sbjct: 309 SFQGAIRYANDRLQMRSLTGPKSPDKAADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQ 368

Query: 379 SFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D A    +EA           + PI K +  +    V    M+  GG G+I E  + +
Sbjct: 369 LLDVAHLSRDEAQRQDAENLLAFLTPICKAFMTETGLEVTNHGMQVFGGHGFIREWGMEQ 428

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             R+     I  G+     LD+L     G+ 
Sbjct: 429 LVRDCRIAPIYEGTNGIQALDLLGRKVLGSQ 459


>gi|254720530|ref|ZP_05182341.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265985561|ref|ZP_06098296.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306838102|ref|ZP_07470959.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264664153|gb|EEZ34414.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306406839|gb|EFM63061.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 375

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARRL 375


>gi|147769055|emb|CAN70218.1| hypothetical protein VITISV_000576 [Vitis vinifera]
          Length = 399

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 139/396 (35%), Gaps = 36/396 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVR 129
           + +A+ A  N        P   R D+  + P    L +      LH     +      + 
Sbjct: 36  ESIAQFAQEN------IAPHASRIDRTNYFPEEVNLWKLMGDFNLHGITAPEEYGGLGLG 89

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +   A    + S    + +     P   + + PK+ S E+      
Sbjct: 90  YLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGNPAQKQKYLPKLISGEH------ 143

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E +       +  +  ++  G        W  + P++   ++ A+ 
Sbjct: 144 -------VGALAMSEAQC------MKCKADRVDGGYILNGNKMWCTNGPIAQTLVVYAKT 190

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + +    G    +  +K+G R + T EL F N F      L      V
Sbjct: 191 DITAHSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGV 250

Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             M     L  L  A   +  M+  +   + Y R+R   G  + +   ++  +AD+   +
Sbjct: 251 YVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVRQREQFGRPIGEFQFIQGKLADMYTSL 310

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            ++ +  + +A + +  K   ++ A   + A        + A  V  +A++C+GG+GY+ 
Sbjct: 311 QSSRSYVYSVARNCENGKIDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVN 363

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E    R  R++    I  G+     + +   L K  
Sbjct: 364 EYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 399


>gi|152995599|ref|YP_001340434.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150836523|gb|ABR70499.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 601

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/486 (18%), Positives = 173/486 (35%), Gaps = 71/486 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERW-----DKVEFHP-AWHALLRRSIHDGLHC 117
            +++   +E A+ A      L      G++      D V   P  +    ++ +  G   
Sbjct: 37  DMVAAILEEGAKFAER---VLSPLNRVGDQQGCQFKDGVVTTPEGFKEAYQQYVEGGWPS 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                         +  +    +   +    G     S  + + + L  T    + +  K
Sbjct: 94  LSHPEEVGGQGLPDSLGMMVTEMIATSNWSWGMYPGLSHGAMNTIELHGTDEQKQTYLTK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+
Sbjct: 154 LVSGEWTGT-------------MCLTEPHCGTDLGMLKTKAEPQADGSYAITGTKIFISA 200

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGN 281
              D       I+LA++         +  F+VP+   DG       N +    +++K+G 
Sbjct: 201 GEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKHNVDGSGEIADRNQVSCGSIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + F    GFL+G+ N     +        L +A+  ++    +L  ++ YA+ 
Sbjct: 261 HGNATCVMNFDGAKGFLIGEPNRGLNCMFTFMNTARLGTALQGLAHAEWALQNSVAYAKD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAK 384
           R                  +I  P ++R +           AL    +   D      A 
Sbjct: 321 RLQMRSLSGPKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRALIHYCSMLVDIMKKGTAD 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++E      ++ PI K +  +         ++  GG G+I E  + ++ R+   + +  
Sbjct: 381 EKAEADELMSLLTPIAKAFLTETGFESANHGLQVFGGHGFIAEWGMEQNVRDCRISMLYE 440

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           G+     LD+L                +    G++ ++   I+      CKE KG  R  
Sbjct: 441 GTTGIQALDLLG-------------RKVLMTQGATLRRFTKIIH---KFCKEHKGDKRLK 484

Query: 505 TEKIAL 510
           +   AL
Sbjct: 485 SYITAL 490


>gi|15597748|ref|NP_251242.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107102000|ref|ZP_01365918.1| hypothetical protein PaerPA_01003047 [Pseudomonas aeruginosa PACS2]
 gi|218891469|ref|YP_002440336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254235543|ref|ZP_04928866.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719]
 gi|254240984|ref|ZP_04934306.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192]
 gi|313107456|ref|ZP_07793644.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9948611|gb|AAG05940.1|AE004683_4 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126167474|gb|EAZ52985.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719]
 gi|126194362|gb|EAZ58425.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192]
 gi|218771695|emb|CAW27469.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310880146|gb|EFQ38740.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 375

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 138/393 (35%), Gaps = 29/393 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +++AR   +   +L    P    WD+    PA    +R     G    +    +    
Sbjct: 9   QIRDMARQ--FAQERLK---PFAADWDREHRFPA--EAIREMADLGFLGMLVPEEWGGAQ 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                   A             +MS   +   M               K  S E      
Sbjct: 62  TGHLAYAMALEEIAAGDGACSTIMSVHNSVGCMPIH------------KFGSAEQKERFL 109

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P+ + S+     LTE + G+D + + ++ ++  D        ++  S   +   I+ A 
Sbjct: 110 RPLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGAKQFITSGSHAGMVIVFAV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
            +   G   +   +      G    R+++K+G  ++ T +L F++        LG+    
Sbjct: 170 TDPDAGKRGISAFIVPTDTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLGEEGEG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       +  A  +V   R +   A  YA  R   G  +I+   +   +AD+A  
Sbjct: 230 YRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMATR 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA A  +    A+  +       EA+ A       K +  +MA  V + A++ +GG GY+
Sbjct: 290 IAVARQMVHHAASLREAGLPCLTEASMA-------KLFASEMAEEVCSAAIQTLGGYGYL 342

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  + R YR+     I  G+ +   L +   L
Sbjct: 343 KDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|255690222|ref|ZP_05413897.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260624241|gb|EEX47112.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 568

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/469 (20%), Positives = 178/469 (37%), Gaps = 48/469 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRKFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +     P  H  + P+I   E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +   + F T+      + L S  KK+      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           S +  KE +        AR L E  A       L +      +++F ++
Sbjct: 489 STNAVKEVQDQELLDFTARKLVEMAADIIMCHLLIQDASKA-SELFSKS 536


>gi|91218302|ref|ZP_01255248.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
 gi|91183577|gb|EAS69974.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
          Length = 380

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 124/371 (33%), Gaps = 27/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           ER +  EF       +++    G    +    +        ++ +    L  +    +  
Sbjct: 30  ERDENEEFP---KEQIKKLGELGFMGMMASPDYGGGGMDTVSYVLAMEELSKIDASASVV 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   +      +    +    K +  K+ + E                   L+E   G+D
Sbjct: 87  VSVNNSLVCWGLDTYGSEEQKKKYLSKLTTGE-------------KIGAFCLSEPEAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +  +    + D         W  +   +  ++++A  +       +   + + +  G 
Sbjct: 134 ATSQKTTAIDMGDHYVINGTKNWITNGNSASVYLVIAHTDKDKKHRGINAFIMEKNMEGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
                + K+G R + T  L F++        +     G    MK L    +  A  ++  
Sbjct: 194 VVGPKERKMGIRGSDTHSLTFNDVKVPKENRIGEDGFGFKFAMKTLAGGRIGIAAQALGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +   A  Y++ R   G  +++   +   +AD+   I AA  +  + A   D   +  
Sbjct: 254 AAGAYELAKSYSKIRKAFGTEIMNHQAIAFKLADMHTSIEAARHMVMKAAWDKDNGLNYD 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A       K +  ++A  V  EA++  GG+GY+ E  + R  R++    I  G+ 
Sbjct: 314 LSGAMA-------KLYASQVAMDVTIEAVQVHGGNGYVREYHVERMMRDAKITQIYEGTS 366

Query: 448 NAMVLDVLNLL 458
               + +   +
Sbjct: 367 EIQKIVISRSI 377


>gi|26987110|ref|NP_742535.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|148545649|ref|YP_001265751.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|24981738|gb|AAN65999.1|AE016228_12 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|148509707|gb|ABQ76567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
 gi|313496734|gb|ADR58100.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 601

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 181/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLSPLNRVGDQEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   +    G     S  + + ++   T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLALSEMVGGSNWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  NG+    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +      G + +    + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGNEAVKEFVEPLAAINKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|258512022|ref|YP_003185456.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478748|gb|ACV59067.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 377

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 133/376 (35%), Gaps = 32/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    + R+    G         +            A      A    
Sbjct: 26  PHAAEWDRTEHFPI--EVFRKMGELGFLGLPIPEEYGGAGADMISYCLAVEEIGRACGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G      V+ A   + L  T    + +               PM +       GLTE   
Sbjct: 84  GLSYEAHVSLACTPILLYGTEEQKQKYL-------------VPMARGEALGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +      D  + ++G+K F ++     +++L  V        +   +     
Sbjct: 131 GSDAGGTRTTAVLEGDE-WVITGNKIFNTNGGYAKYVVLTAVTDPAS-RGISAFIVPTDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +   K+G R++ TVEL   +        L       +    L  LD   ++++ 
Sbjct: 189 EGFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPLNAGFKQF--LSTLDGGRVAIAA 246

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V +A A     + YA+ R   G  +     ++  +AD+A+ I  A     + A   D+
Sbjct: 247 LAVGIARAAFETALAYAKTRVQFGQAISKFQAIQHKLADMAMHIDLARNAVMKAAWLKDQ 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EA+YA       K +  +M      +A++ +GG GY+ E  + RHYR++    I
Sbjct: 307 GRPYTLEASYA-------KLFASEMCTRTCEQAIQILGGYGYMREYPVERHYRDAKLIEI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 360 GEGTSEIQRLVIARQL 375


>gi|312961758|ref|ZP_07776256.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311284017|gb|EFQ62600.1| isovaleryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 387

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     PA   L R+    GL        +        AH +    +   +   
Sbjct: 31  PRAAQIDIDNLFPA--DLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T     ++ P++ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQINRNGTHEQKLNYLPQLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEANILGALNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + +  +
Sbjct: 256 TGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACERGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|254475092|ref|ZP_05088478.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214029335|gb|EEB70170.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 386

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 145/399 (36%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P  +  D+    PA   L +     GL        F
Sbjct: 7   TFDLGEDVNALRDMVHRWAQERIKPMAQEIDQKNEFPA--ELWQEMGELGLLGITVPEEF 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L  +    + + P++ S E+
Sbjct: 65  GGAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNASEEQKQKYLPRLISGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDHFRLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPEAGSKGITAFLIEKEMKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENILG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A +    M   + E + Y + R   G  + +  +M+  IA
Sbjct: 232 EEGKGVRVLMSGLDYERVVLAGIGTGIMAACMDEMMPYMKERKQFGQPIGNFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A A  + +A + D+     ++AA           +  ++A     +A++  G
Sbjct: 292 DMYTAMNTARAYVYEVAKACDKGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 345 GAGYLNDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|312898450|ref|ZP_07757840.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
 gi|310620369|gb|EFQ03939.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359]
          Length = 379

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 144/377 (38%), Gaps = 36/377 (9%)

Query: 89  PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+ E  H     LL +    GL        F             A        E
Sbjct: 26  PYALEMDETEKLHEG---LLEKLAAQGLLGVAIPEEFGGAGLD-------AVTIAAIYEE 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G   +   T+ +  AL + P +       I   +        +          LTE   
Sbjct: 76  LGKGCAGVATTVAANALASYPVI-------IAGNDDQKKRYFDIINDDHLAAFALTEPGT 128

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D  ++++Q  K  DG  Y L+G K F+++  +++ F++ A      G   +   +   
Sbjct: 129 GSDAGSVSTQATKTEDGKGYILNGTKCFITNGALAEVFVVFANTRKGGGVRGLTAFIVKK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324
              G    + +NK+G R++ T EL F + F       +      +  +I +  LD+A   
Sbjct: 189 GTPGFSVGKAENKMGIRASNTTELIFQDCFVP---MEDRLGREGQGFRIAMNTLDAARPF 245

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V  + V +AEA       YA+ R      +    +++  IAD+A+ +  A  L  R    
Sbjct: 246 VGAVSVGIAEAAFRACTEYAKVRVQFDKPIASFQMVQAMIADMAMKVEGARLLVQRACWM 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+    S EAA       I K     +A  V  +A++ +GG GYI+E  + ++ R++  
Sbjct: 306 KDQGMDFSREAA-------IAKCNASDVAMQVTTDAVQVMGGYGYIKEYPVEKYMRDAKI 358

Query: 440 NSILLGSGNAMVLDVLN 456
             I  G+     L + N
Sbjct: 359 MQIYEGTNQIQRLVIAN 375


>gi|298480751|ref|ZP_06998947.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22]
 gi|298273185|gb|EFI14750.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22]
          Length = 568

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 170/446 (38%), Gaps = 47/446 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRKFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +     P  H  + P+I   E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +   + F T+      + L S  KK+      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIA 509
           S +  KE +        AR L E  A
Sbjct: 489 STNAVKEVQDQELLDFTARKLVEMAA 514


>gi|120402372|ref|YP_952201.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955190|gb|ABM12195.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 387

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/399 (20%), Positives = 147/399 (36%), Gaps = 39/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E V++ TA   A              P    WD+    PA   +LR +   G+       
Sbjct: 10  ERVIAETAAAFAE---------KRLAPYALEWDETHHFPA--DVLREAAELGMAAIYCRD 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R       A       +S     A MV    T    K+W P++ S  
Sbjct: 59  DVGGSGLRRIDAVRIFEKLATADPTVAAFLSIHNMCAWMVDSFGTEEQRKEWVPRLASM- 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D +A+ ++  +  D  Y L G K F+S    SD
Sbjct: 118 ------------DAIASYCLTEPGAGSDASALRTKAVRSGDD-YVLDGVKQFISGAGSSD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F          
Sbjct: 165 VYVVMART-GSDGPKGISAFVVPKDTPGLSFGTDEQKMGWNAQPTKQVIFEGARVPADAL 223

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L    G      I +       ++ A  S+ G + +  ++  Y   R   GG L+D+P +
Sbjct: 224 LGGPDGEGTGFGIAMKGLNGGRINIAACSLGGAQTAYDKSAAYLADRQAFGGALLDEPTI 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  +  +  L +R A + D       E      +  + K +       V  +A
Sbjct: 284 RFTLADMATALETSRVLLWRAATALDNDHPDRVE------LCAMAKRYVTDACFEVADQA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++  GG GY+ E  + +  R+   + IL GS   M + +
Sbjct: 338 LQLHGGYGYLREYGLEKIVRDLRVHRILEGSNEIMRVVI 376


>gi|11498741|ref|NP_069970.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304]
 gi|2649449|gb|AAB90105.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304]
          Length = 387

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 152/399 (38%), Gaps = 39/399 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A+E A      TP+L          D+ E  P  + L ++    G H       +   
Sbjct: 16  RAAREFAE--KEFTPEL------ARECDREEKFP--YELWKKCAKLGFHAVDIPEEYGGG 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 K+     +       G           ++ L  +    + W  K+         
Sbjct: 66  GYGPIEKMIVMEEFSAVNPGLGLACLLPTFGFEILVLHGSEEQKEKWLTKL--------- 116

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
                +  V +G+  TE   G+D A I ++  K  D  + ++G K F+S+  ++D  ++ 
Sbjct: 117 ----ARGDVIMGMANTEPDAGSDAANIKTRAVKEGDE-WVINGTKQFISNGSIADFLLVT 171

Query: 247 AQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           A+    + +     +   + + +  G    ++K K+G R+  T E+ FSN       L+G
Sbjct: 172 ARTREMDPKAKHRGISYFIVETNREGYKANKIKGKMGIRATDTAEISFSNVRVPAENLVG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +   +  +     +V   + +L   I Y ++R      L     ++  IA
Sbjct: 232 EEGKGFYYMMEFFDMSRVWVGAQAVGIAKGALKLVIDYVKQRKAFNVPLATFQYIQFKIA 291

Query: 361 DIALDIAAATALSFRLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           ++A  I AA  L +R A    ++ K           ++ + K++  ++A      A++  
Sbjct: 292 ELATKIEAARTLVYRAAAVQVEQGKPD-------NTLSSMAKWYAGEVAVETANWALQFH 344

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E +I + YR++    I  G+     L +   L
Sbjct: 345 GGYGYIDEYAINQFYRDAKITEIYEGAKEIEKLIIARNL 383


>gi|149924169|ref|ZP_01912546.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149814970|gb|EDM74530.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 382

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 62/404 (15%), Positives = 139/404 (34%), Gaps = 34/404 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +S    +L   A      +    P    +D+ E  P    L R +   GL       ++ 
Sbjct: 6   ISEEQSQLLETARKFA--VERIIPVAHEYDETEKFPT--ELFREAWELGLMNVELPEAYG 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +          A             +  +   A  + +  +      W  ++       
Sbjct: 62  GLGLSTLDGCLIAEELGYGCAGIETSIMCNHLGALPLMVGGSEEQKDKWLGRL------- 114

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFI 244
                  +    I    +E   G+D+A + ++  +K   G       +W  ++  +  + 
Sbjct: 115 ------SEDFEFISYACSEPDAGSDVAGMKAKLTKKEGGGWILNGQKRWITNASHAGIYT 168

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             A ++  +    +   + D +  G+   + + K+G R++ T ++ F +     + D  +
Sbjct: 169 GFATIDPALKHKGITAFVVDRNAKGVSVGKKEKKLGQRASDTADVLFEDV---EIPDEQI 225

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P +   I +             +   +R  L E+  YA  R   G  + +   ++  
Sbjct: 226 LGEPGKGFYIAMEVFDKSRPMIGACAAGLIRRCLDESCKYALERKTFGVPIGNHQAIQMI 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+   A+  +  + A   D  K R+  ++ A+        +    A     +A++ 
Sbjct: 286 LADMAISYEASRLMYMKAAWEVDAGKKRTLTSSLAKC-------FSADAAVKAATDAVQV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            GG GY  E  + + YR++    I  G+     + +   L +G 
Sbjct: 339 FGGYGYTREYPVEKLYRDAKLLQIYEGTSQVQRMVIARGLLRGA 382


>gi|171685065|ref|XP_001907474.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942493|emb|CAP68145.1| unnamed protein product [Podospora anserina S mat+]
          Length = 461

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 137/368 (37%), Gaps = 27/368 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +F P    +  +    GL     D +   +    QAH I    L   +   A    + S 
Sbjct: 109 QFPP---DMWLKLGEAGLLGITADPAVGGLGLGYQAHCIVMEELSRASGSIALSYAAHSQ 165

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
              + + L  +    + + P + +              +    L ++E   G+D+ ++ +
Sbjct: 166 LCVNQLQLNGSKEQKEKFLPDLIAG-------------TKVGALAMSESGSGSDVVSMRT 212

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRL 275
           + +++  G        W  + P +D  I+ A+     G   +   + +     G    R 
Sbjct: 213 RAKEVDGGYVLNGSKMWITNGPDADIVIVYAKTVPDGGSKGITAFIVETDKAEGFECLRK 272

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G R + T EL F N F     +LG +N     + +   L  L  +   +  M+ +L
Sbjct: 273 LDKMGMRGSNTGELVFENVFVPKENVLGKVNGGVRVLMEGLDLERLVLSAGPLGLMQAAL 332

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ YA  R   G  +     M+  +AD+   + A+ A ++  A + D      E+A  
Sbjct: 333 DVALPYAHGRKQFGTPIAQFQFMQGKLADMYTKLQASRAYTYATAKAVD------EQADI 386

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                     +  + A     +A++ +GG GY EE   +R  R++    I  G+     +
Sbjct: 387 RTQDCAGAILYAAERATECALDAIQILGGMGYTEEMPASRILRDAKLYEIGAGTSEVRRM 446

Query: 453 DVLNLLEK 460
            +     K
Sbjct: 447 VIGRAFNK 454


>gi|113867952|ref|YP_726441.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526728|emb|CAJ93073.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 393

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 136/375 (36%), Gaps = 23/375 (6%)

Query: 89  PGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P     D+ +  P  AW  +    +   L  ++ +      +   AH I    +   +  
Sbjct: 32  PRAAEIDRTDQFPMDAWKKMGDLGV---LGITVAEEYGGANMGYLAHMIAMEEISRASAS 88

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                 + S    + +    TP     + PK+ S E+                L ++E  
Sbjct: 89  VGLSYGAHSNLCVNQIHRNGTPAQKAKYLPKLVSGEW-------------IGALAMSEPN 135

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+ ++  + +   D         W  + P  D  ++ A+ E  +G   +   + +  
Sbjct: 136 AGSDVVSMKLRAEFKGDRYVLNGTKMWITNGPDCDVLVVYAKTEPELGARGMTAFIVEKG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS-- 324
             G    +  +K+G R + T EL F +    +   L V  G  + +   +  + A++S  
Sbjct: 196 MKGFSVAQKLDKLGMRGSHTGELVFQDVEVPVENILGVENGGAKVLMSGLDYERAVLSGG 255

Query: 325 -VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+  +     Y   R   G  + +  +++  +AD+   + AA +  + +  + D  
Sbjct: 256 PVGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYTVGKNLDAL 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S        R        +  + A  +  E ++ +GG+GYI E    R +R++    I 
Sbjct: 316 GSGHVRQ--VRKDCAAVILYTAEKATWMAGETVQILGGNGYINEYPAGRLWRDAKLYEIG 373

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 374 AGTSEIRRMLIGREL 388


>gi|294675962|ref|YP_003576577.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           capsulatus SB 1003]
 gi|294474782|gb|ADE84170.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB
           1003]
          Length = 560

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 102/519 (19%), Positives = 200/519 (38%), Gaps = 54/519 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P  V   L   G+         L R  + +  +L      G     V   P +    ++ 
Sbjct: 34  PETVEAVLTEAGKLC-DEVMAPLLRAGDLHPARLE----NGV----VRTSPGFREAYQQI 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP 168
              G       + +  +   Q   I  A   +M+       ++P +T   + AL    + 
Sbjct: 85  AEGGWVAVAAPQEYGGMGLPQ--TICVAVNDMMSGANLALQLNPLLTQGQIEALEHHASE 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + PK+ S E+  T             + LTE + G+D+ A+ S+ + + DG Y +
Sbjct: 143 EIKALYIPKLISGEWSGT-------------MNLTEPQAGSDVGALRSRAEPLGDGTYAI 189

Query: 229 SGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCY 272
           +G K F+S   SD       ++LA++         +  F+VP+ + D     G  N L  
Sbjct: 190 TGQKIFISWGDSDVTENICHLVLARLPDASPGTKGISLFMVPKYIPDAAGKPGVANTLGV 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             L++K+G   + T  + F    G+++G+       +  M     L   +  +     + 
Sbjct: 250 VSLEHKMGLHGSPTCVMSFEAAKGWMVGEPGKGMAAMFTMMNNARLAVGVQGIGVAEAAF 309

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
            +A+ YA+ R      +I    ++R +A++  +I AA +++   A + D  ++  E+   
Sbjct: 310 QQALAYAQERVQFSQ-IIQHADVRRMLAEMRAEIFAARSIALACAVALDLGRATGEDHWL 368

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A ++ PI K +       V  + ++  GG G+IE+   A++ R+    +I  G+    
Sbjct: 369 ARAALLTPIAKAYGTDTGIWVAEQGVQVHGGMGFIEQTGAAQYCRDVRVTAIYEGTNGIQ 428

Query: 451 VLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
            +D+    +        +L   +E D   + ++ +  L +++    E     R  TE + 
Sbjct: 429 AMDLAGRKMADDGRAAFRLLQEIE-DAAKAAREALPDLAEAVWQSAET---LREHTEGM- 483

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
             +       AG       F   R L   +     L G 
Sbjct: 484 -IAQGTQDRFAGAVPYLRAF--ARVLGAHYHLRAALEGG 519


>gi|15806274|ref|NP_294979.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459002|gb|AAF10828.1|AE001973_1 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 387

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 130/374 (34%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P     LR     GL  +     +                   A    
Sbjct: 31  PRAAEYDRSGEYP--REQLRGLAELGLLGATVPEEWGGAGLDSVTYALCLEEIAAADSSV 88

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S        M+    T    + +   + S E+                  LTE   
Sbjct: 89  AVIVSVQNGLPEQMILNYGTDAQREKYLRPLASGEH-------------IGAFCLTEAHA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A++  + ++  D         W  S   +D F+++A+  G  G   V   + +   
Sbjct: 136 GSDAASLRLKAERDGDDWVLNGAKAWITSGNHADTFLVMART-GGPGARGVSCFIVERGT 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL   + ++K+G  +  T  + F N        +     G +  +  L    +   ++ 
Sbjct: 195 PGLSSGKPEHKMGQHAAQTTTVSFDNVRVPHANLVGEEGQGLIIALSSLDSGRIGIGMLG 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L  A  YA  R   G  + +   +   IA +A  I +A  +  + A   D+ +
Sbjct: 255 LGIARSALEHAAAYANEREQFGKKIREFEGVSFKIARMAARIESARLVGLKAAWLKDQGQ 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S+E       A I K    + A  V  +A++  GG+GY  E  + + YR++    I  
Sbjct: 315 PFSKE-------ASIAKLLGSEAAVDVTRDAVQIFGGNGYSAEYPVEKLYRDAKITEIYE 367

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   +
Sbjct: 368 GTSEIQQLVISRAV 381


>gi|330872314|gb|EGH06463.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 592

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 90/479 (18%), Positives = 169/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGDYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           ++NK+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IENKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|285016972|ref|YP_003374683.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73]
 gi|283472190|emb|CBA14697.1| putative acyl-coa dehydrogenase protein [Xanthomonas albilineans]
          Length = 387

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 77/416 (18%), Positives = 157/416 (37%), Gaps = 46/416 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +E++LL + V +  A+E+A +A               + D+    P   +L R+    GL
Sbjct: 12  EEIDLLRDSVAAFAAREIAPLA--------------AQADRDNTFPV--SLWRKLGEQGL 55

Query: 116 HCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                +  +        AH +    +            + S    + V           +
Sbjct: 56  LGLTVEEEYGGSAMSYLAHVVAMEEISRACGAIGLSYGAHSNLCVNQVRKNGNAAQKTHY 115

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  + +   D         W 
Sbjct: 116 LPKLCSGEH-------------VGALAMSEPGAGSDVVSMKLRAEARGDRYVLNGNKMWI 162

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P +D  ++ A+ +   G   +   + + +  G    +  +K+G R + T EL F + 
Sbjct: 163 TNGPDADVLVVYAKTDPAGGARGITAFVVEKTMPGFSTAQKLDKLGMRGSNTCELVFQDC 222

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L    G V  +   +  +  ++S   +  M  +L   + Y   RH  G  + +
Sbjct: 223 EVPAENVLGEVGGGVRVLMSGLDYERVVLSGGPLGLMAAALDVVLPYVHERHQFGEAIGN 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +M+  +AD+ + + A  A  + +A S D  ++  ++AA A         +  + A  +
Sbjct: 283 FQLMQGKLADMYVGLNACRAYVYAVARSCDAGRTTRQDAAGA-------ILYAAEKATWL 335

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
             +A++ +GG+GYI +    R +R++    I  G+           +  G  LFEQ
Sbjct: 336 TGQAIQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEI------RRILIGRELFEQ 385


>gi|331238719|ref|XP_003332014.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
 gi|309311004|gb|EFP87595.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 446

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 78/385 (20%), Positives = 158/385 (41%), Gaps = 28/385 (7%)

Query: 91  GERWDKVEFHPAWHALLRR----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            +R+ +    P    +  +          ++   +   ++D  F  +   Q H    A  
Sbjct: 72  AQRFAEEVVAPKVREMDEKETTDLGLAVVAVDPEIIKGLFDNGFMGIETSQEHGGSGASF 131

Query: 141 -YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
              +  +E    + PSV+    V         +++A K    +Y      P   TS    
Sbjct: 132 TSAILVIEELAKVDPSVSLICDVHNTIANTTIRNYASKALLDKYM-----PDLSTSKVAC 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A+ ++  K S+G Y ++G K ++++   ++ F++ A ++   G   +
Sbjct: 187 FCLSEPASGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFANLDPSKGYKGI 246

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              L + S  G+   + + K+G ++++T  L F N       L+G   +      ++   
Sbjct: 247 SCFLLEKSM-GVEIAKKEEKLGIKASSTCTLNFDNVKVPKENLIGQEGLGYKYAIEILNE 305

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A   V   + +  +A+ Y  +R   G  + +   M+   AD+  +I AA  L++ 
Sbjct: 306 GRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQFADVHTEIEAARMLTYN 365

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +E K  +E       MA + K +  ++A      A+E  GG G+  E  I +++R
Sbjct: 366 AARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEWCGGVGFTRETGIEKYWR 418

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   +I  GS N     +   ++K
Sbjct: 419 DSKIGAIYEGSSNIQRQTLAKFIQK 443


>gi|138896970|ref|YP_001127423.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196249789|ref|ZP_03148485.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|134268483|gb|ABO68678.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196210665|gb|EDY05428.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 380

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 145/381 (38%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  ER ++ EF      +L +    GL        +        ++ I    +  ++   
Sbjct: 26  PFVERMEQGEFP---RPILAKMAELGLMGITVPEQYGGAGMDFLSYIIAIHEISKVSPTV 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    T    + +  K+   EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A+      G   +   + + 
Sbjct: 130 GSDAKSLKTKAVRRGD-TYVLNGSKIFITNGGEADTYIVFARTNPEETGSRGISAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G+   + + K+G   + TV + F +         N+     E  KI +  LD   + 
Sbjct: 189 GTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPA---ENLLGQEGEGFKIAMANLDVGRIG 245

Query: 325 VSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +AEA       YA+ R   G  + +Q  +   +AD+A    AA  L +R A  
Sbjct: 246 IAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVYRAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     +EA+ A       K +  + A     EA++  GG+GY ++  + R +R++  
Sbjct: 306 RAQGLPCGKEASMA-------KLFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L K
Sbjct: 359 TQIYEGTSEIQRIVISKQLTK 379


>gi|126667848|ref|ZP_01738814.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126627664|gb|EAZ98295.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 136/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    L ++    GL     D ++        AH I    +   +   
Sbjct: 33  PRAADIDRSNEFPM--DLWKKFGDMGLLGITVDEAYGGSGMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHSNGTEEQKQQYLPKLLSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   D         W  + P +  +++ A+ + + G   +   + +   
Sbjct: 138 GSDVISMKLSAKDAGDHYVLNGNKMWITNGPDAHVYVIYAKTDVKAGSKGITAFIVERDA 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R + T EL F +        L    G    +        L  A   
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFQDCKVPKENILGQLGGGARVLMSGLDYERLVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ ++   + Y R R   G  + +  +++  +AD+   +  A +  + +A S D  +
Sbjct: 258 LGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVADMYTYMNTAKSYVYMVAQSADRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  +MA  +  +A++ +GG+GY+ +    R  R++    I  
Sbjct: 318 TTRKDAAGA-------ILYSAEMATKLALDAIQLLGGNGYVNDYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|264676627|ref|YP_003276533.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207139|gb|ACY31237.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 376

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 140/395 (35%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  +     P   RWDK    P    + +     G +            
Sbjct: 5   QDQEMIRDALRDFVR-EQITPHAARWDKEHEFP--KDVHQGLAALGAYGICVPEELGGAG 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                                 ++S +    + + +        + W             
Sbjct: 62  LDYVSLALVLEEIAAGDGGTSTVISVTNCPVNAILMKYGNASQQEQWL------------ 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIML 246
             P+ +  +     LTE   G+D +A+ +   +   G Y ++G K F++S  + D  I++
Sbjct: 110 -RPLAQGQMLGAFCLTEPHVGSDASALRTTAVRDG-GDYVINGVKQFITSGKNGDVAIVI 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
           A  +   G   +   +      G    RL++K+G  S+ T ++ F N       L+G   
Sbjct: 168 AVTDKTAGKKGMSAFIVPTGNPGYQVARLEDKLGQHSSDTAQINFENCRIPAANLIGAEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  SV   R +   A+ Y++ R   G  + +   +   +A+ A
Sbjct: 228 EGYRIALSALEGGRIGIAAQSVGMARAAFECALQYSKERESFGQPIFNHQAVGFRLAECA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +  A+  D      +EAA A       K +  +MA  V + A++ +GG G
Sbjct: 288 TQIEAARQLIWHAASLRDAGLPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + +  + R YR+     I  G+ +   + +   L
Sbjct: 341 VVSDFPVERIYRDVRVCQIYEGTSDVQKILIQRAL 375


>gi|104784027|ref|YP_610525.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95113014|emb|CAK17742.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 592

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/589 (17%), Positives = 202/589 (34%), Gaps = 78/589 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+         +S    L  ++          LE  G+ V   T   L+R A+ 
Sbjct: 10  DMGFVLNEVFNVAE--LWSQLPALAEVVD--ADTAMAVLEEAGK-VTGKTIAPLSRAADE 64

Query: 80  NTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                      G  WD   V     +    +     G      D     +   +    + 
Sbjct: 65  E----------GCHWDNGAVRTPAGFIDAYKTYAEGGWVGVGGDPLLGGMGMPKVISAQV 114

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +   + L  G     +  +   +    +  + + + P +++  +             A
Sbjct: 115 EEMVNASSLAFGLYPMLTAGACLSINAHASEALKEQYLPNMYAGVW-------------A 161

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
             + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++   
Sbjct: 162 GSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDA 221

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                 +  FLVP+ L +     G+ N      +++K+G + +AT  + F    G+++G+
Sbjct: 222 PAGPKGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQGSATCVMNFDEAVGYIVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------IL 349
            N     +  M     L   I  ++    S   A+ YAR R  S               +
Sbjct: 282 PNKGLAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKVADPI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYW 403
           I  P ++R +  +        A S  +A   D AK   + A          ++ P+ K +
Sbjct: 342 IVHPDVRRMLLTMKALTEGGRAFSTYVAMQLDSAKYSEDAATRKRSEELVALLTPVAKAF 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
              +         +  GG GYI E    +  R+     I  G+     LD++   ++  G
Sbjct: 402 LTDLGLECTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASG 461

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAAL 517
              ++     + Q + S+G ++    +   +   +   L  ++ +K         +A+  
Sbjct: 462 GAYYQLFADEIRQFIASAGGELGEFTKPLAASLDQLDELTAWVLDKAKGNPNEIGAASVE 521

Query: 518 YRAGMNDIADVFL------ENRFLDNCHSTHCML--HGRFNAAHIIDSL 558
           Y      +A  ++        +  +     +       RF  A ++  +
Sbjct: 522 YLHAFGYVAYAYMWALMARAAQAGEGDTDFYGAKLGTARFYFARLLPRV 570


>gi|159899922|ref|YP_001546169.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892961|gb|ABX06041.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 556

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 216/543 (39%), Gaps = 51/543 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVAL-----IANFPSVVHKELELLGEYVLSCTAQELARMANY 79
            NQP   +G N YS D LL         A+  S +   L+ +G+   +   Q   ++A+ 
Sbjct: 4   FNQPAPQLG-NQYSDDRLLQLYLRRRLPADVLSQIKPALQTIGDLAGNELYQ--LQLADR 60

Query: 80  -NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            N PQL  +   GER D++   P W    + +   GL  + ++++F    R      + A
Sbjct: 61  LNEPQLTQWDAWGERIDQIVLTPLWQRAEQIAASYGLIATAYEQTFHEYSR----TCQFA 116

Query: 139 RLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
             YL       +      +  +A  +       + +   P + SR+ D            
Sbjct: 117 LAYLFHPSSDVYSCPLAMTDGAARTLLQAGNQALIERAIPHLISRDPDQ---------FW 167

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255
             G  +TE  GG+D+    +  ++  DG + L G KWF S+  S   + LA+ EG   G 
Sbjct: 168 TSGQWMTESTGGSDVGLSETIARQAEDGTWRLYGRKWFSSATTSQMALTLARPEGNPAGG 227

Query: 256 FLVPRL-LEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             +    +E     G    +   RLK+K+G R   T EL    T    +  L      + 
Sbjct: 228 RGLALFYVETRDQRGRLTQIEVNRLKDKLGTRKVPTAELNLLGTPAIPVQGLRDGVRAIV 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            M  +    +++ +V  MR  +A A  YA++R   G +L  +P+    +A +  + A A 
Sbjct: 288 PMLQITRTWNSVSAVGFMRRGMALAQDYAQKRWAFGSLLNQKPLHVDTLAGLQAEYAGAF 347

Query: 371 ALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            L+F L       +  +S  ++    R++  I K    + A    +E +E  GG+GY+E+
Sbjct: 348 LLTFYLIELLGLDETGRSTPQQRQLLRLLTSIAKLTTARQAVNHTSEIIESFGGAGYVED 407

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN----LFEQLFSTLEQDLGSSGKKV 483
             +    R++   SI  G+ N + LD L  L +       L EQ+   L      S  + 
Sbjct: 408 TGLPSLLRDAQVLSIWEGTTNVLALDSLRALSEDPGIWPVLREQVNLWLSNAHDPSLSQA 467

Query: 484 ITILRDSISLCKE-----------DKGLARFLTEKIALASSAAALYRAGMNDI---ADVF 529
           I +++ ++  C++            +  AR     +  A   A L       +    D +
Sbjct: 468 IVVVQTALDRCEQWLAESSNDRSVAEMGARRWALTLGRALELALLIEHAQAALIAPNDRW 527

Query: 530 LEN 532
           L  
Sbjct: 528 LAA 530


>gi|299068196|emb|CBJ39415.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum CMR15]
          Length = 393

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 137/397 (34%), Gaps = 26/397 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q     P  E  D+ +  P  AW  +       G+        + 
Sbjct: 12  GEDIEMLRSAVRDWAQAE-LAPRAEAIDRSDQFPMDAWKQMGDL----GVLGITVAEEYG 66

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    TP     + PK+ S E+ 
Sbjct: 67  GTGMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTPAQKAKYLPKLVSGEW- 125

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++  + ++  D         W  + P  D  +
Sbjct: 126 ------------IGALAMSEPNAGSDVVSMKLRAERRGDRYVLNGTKMWITNGPDCDVLV 173

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +  + E  +G   +   + +    G    +  +K+G R + T EL F N        L  
Sbjct: 174 VYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPAENILGE 233

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             G    +   +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD
Sbjct: 234 ENGGTRVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIAD 293

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + A  A  + +  + D      E     R        +  + A  +  EA++ +GG
Sbjct: 294 MYTTLQACRAYLYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGG 351

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GYI E    R +R++    I  G+     + +   L
Sbjct: 352 NGYINEFPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|256015006|ref|YP_003105015.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|255997666|gb|ACU49353.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
          Length = 384

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRICEGTTQIQQIVIARNMIREAR 383


>gi|162449436|ref|YP_001611803.1| acyl-coenzyme A dehydrogenase, short/branched chain [Sorangium
           cellulosum 'So ce 56']
 gi|161160018|emb|CAN91323.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Sorangium
           cellulosum 'So ce 56']
          Length = 388

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 79/419 (18%), Positives = 152/419 (36%), Gaps = 44/419 (10%)

Query: 55  HKELELLG--EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
           H  L  L   E +   +  + AR      P+  A    G   D+    P           
Sbjct: 3   HPPLTQLSDEERLFRDSVLDFAR--KRVAPRAAAMDEEGA-LDRDLLPP--------LFE 51

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVH 171
            GL       ++          I A     +       L+   +   A+      +    
Sbjct: 52  LGLMGIEIPEAYGGSGAGFFSAILAIEALAVVDPSVSVLVDVQNTLVANAFLRWGSEAQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P++ SR++                  L+E   G+D  A+ ++ ++  D        
Sbjct: 112 ERYLPRL-SRDW-------------VGSYALSEAGSGSDAFALAARAERRGDRWILNGRK 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  ++  S  F++ A V+   G   +   + + S  G    + +NK+G R+++T EL  
Sbjct: 158 LWITNANESSVFLVFANVDPTKGYKGITAFVVERSFPGFSVGKKENKLGIRASSTCELVL 217

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345
            +         NV     +  KI I  L+   + +    + LA      A+ Y   R   
Sbjct: 218 EDCEVPEG---NVIGEVGKGYKIAIETLNEGRIGIGAQMLGLAAGAFDHAMRYMGERKQF 274

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     ++   A +A++I AA  L +  A   D  +   +EAA A       K +  
Sbjct: 275 GQSIASFQGVQFQYARVAMEIEAARLLVYNAARLKDAGQPFVKEAAMA-------KLFAS 327

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           ++A    +  +E +GG G+ ++  + + YR++    I  G+ N  +  +  LL+ G + 
Sbjct: 328 EVAERTASLCIEFMGGVGFTKDYPVEKLYRDAKIGKIYEGTSNMQLSTIAKLLQAGYDA 386


>gi|23016676|ref|ZP_00056429.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 389

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 135/375 (36%), Gaps = 26/375 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
             D+    P  + L  R    GL     D  +         H +    +   +       
Sbjct: 37  EIDRSNEFP--NELWPRLGQMGLLGITVDEKYGGAGMGYLEHVVAMEEISRASASVGLSY 94

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S    + +    T      + PK+ S EY                L ++E   G+D+
Sbjct: 95  GAHSNLCVNQIKRNGTEAQKMKYLPKLISGEY-------------IGALAMSEPNAGSDV 141

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++  + +K  D         W  + P +D  ++ A+ +   G   +   L + +  G  
Sbjct: 142 VSMKLKAEKKGDRYILNGTKMWITNGPDADVIVVYAKTDVTAGPRGITAFLVEKTFKGFS 201

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGM 328
             +  +K+G R + T EL F++        L      V  +   +  +  +++   +  M
Sbjct: 202 VAQKLDKLGMRGSNTGELVFTDCEVPEENVLGAVGKGVNVLMSGLDFERVVLTGGPLGIM 261

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +   + Y   R   G  +    +M+  +AD+     A  A ++ +A + D  ++  +
Sbjct: 262 AACMDVVVPYIHERVQFGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGETSRK 321

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA           +  + A  +  EA++ +GG+GYI E +  R  R++    I  G+  
Sbjct: 322 DAAG-------VILYGAEKATWMALEAIQTLGGNGYINEYATGRLLRDAKLYEIGAGTSE 374

Query: 449 AMVLDVLNLLEKGTN 463
              + +   L + T 
Sbjct: 375 IRRMLIGRELFEETK 389


>gi|325927007|ref|ZP_08188281.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325542626|gb|EGD14094.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 393

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 133/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 35  PHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++A   T  V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMATWLIASYGTDAVRAQWGQAMTSG-------------AKLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 140 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L N   G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLGNEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|187919393|ref|YP_001888424.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717831|gb|ACD19054.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 393

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 130/376 (34%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH I    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGDLGVLGMTVSEEYGGANMGYTAHMIAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P  D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKLRAEKKGDHYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +  +K+G R + T EL F +        L    G  + +  +  LD     ++G
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGAKVL--MSGLDYERAVLAG 254

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  A     + Y   R   G  + +  +++  +AD+   + A  A  + +    D 
Sbjct: 255 GPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                E     R        +  + A  +  EA++ +GG+GYI E  + R +R++    I
Sbjct: 315 --LGKEHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 373 GAGTSEIRRMLIGREL 388


>gi|87200121|ref|YP_497378.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135802|gb|ABD26544.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 600

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 87/521 (16%), Positives = 178/521 (34%), Gaps = 56/521 (10%)

Query: 34  MNAYSSDS--LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH-AYGPG 90
            NA + D+  ++  L+           E   + +     +E  R  +     L+      
Sbjct: 4   YNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPGDRE 63

Query: 91  G---ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G        V     +    R+ +  G         F              +    A   
Sbjct: 64  GCTRHPDGSVTTPAGFKDAYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATANQA 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +  + S +    +P     + P++ + E+  T             + LTE   
Sbjct: 124 FAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLGT-------------MNLTEPHC 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCF 256
           GTD+  I ++ +   DG Y ++G K F+S+   D       ++LA+  G       +  F
Sbjct: 171 GTDLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLF 230

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           +VP+ + +     G  N +    ++ K+G   NAT  + +    G+++G+ N     +  
Sbjct: 231 IVPKFIVNDDGSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFI 290

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAI 359
           M     L   +  ++   V+    + YA  R                  +I  P ++R +
Sbjct: 291 MMNAARLGVGMQGLAQAEVAYQNGLAYALDRRQGRALTGPADPQAKADPIIVHPDVRRML 350

Query: 360 ADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            D    +    AL    A   D        + R E      ++ P+ K +   M   V  
Sbjct: 351 MDGKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYGTDMGYKVAT 410

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471
           +  +  GG GYI E  + +  R++    I  G+     +D+    L   G    ++ F+ 
Sbjct: 411 DMQQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFAL 470

Query: 472 LEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
           ++ +    +  + + ++ + +S    +   A     + A+A
Sbjct: 471 VDGECAEETADETVKLVAERLSKATGEMKAATMWFMQNAMA 511


>gi|325121806|gb|ADY81329.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 600

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/526 (16%), Positives = 183/526 (34%), Gaps = 64/526 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    +  A         ++      G   ++  V     +    ++    G     
Sbjct: 37  RELIDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGFKEAYQKYAELGFTSLT 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  +         +I  + +   +          S  +   +    T +  + +  K+ 
Sbjct: 97  ADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSHGAMRTIEHHGTEQQKQQYLTKLI 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +   +G Y + G K F+S+  
Sbjct: 157 SGAWTGT-------------MCLTESHAGSDLGLIRTKAEPNPNGSYSIMGEKIFISAGE 203

Query: 240 SD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SPNGLCYQRLKNKIGNRS 283
            D       I+LA++         +  F+VP+     DG     N +    +++K+G   
Sbjct: 204 HDLSENIIHIVLARLPQAPTGTKGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  L F    G+L+G  N     +        + +A+  ++   +S   A+ YA+ R 
Sbjct: 264 NATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
                            +I  P ++  +           AL++ LA   D      + + 
Sbjct: 324 AMRSLSGPQYPEKNADPIIVHPAVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQQQ 383

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +         + PI K +  +         ++  GG G+I E  + +  R++  +++  G
Sbjct: 384 QKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEG 443

Query: 446 SGNAMVLDVL---------NLLEKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC 494
           +     LD+L          LL+  T+L +Q     +  + L    +K+  + +  +SL 
Sbjct: 444 TTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIGQQQSNEVLKPYLEKLAELKQQWLSLT 503

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           K     A+   E+I    +A+  Y    + +   +L  R     H 
Sbjct: 504 KTIADKAKHNPEEI---GAASVDYLYFSSYVVFAYLWARMAQVAHE 546


>gi|294664870|ref|ZP_06730189.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605362|gb|EFF48694.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 393

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 80/385 (20%), Positives = 132/385 (34%), Gaps = 25/385 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD     P     + ++   G      D     +  ++             
Sbjct: 31  KQLAPHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATV 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +  ++A   T  V   W   + S              +      LTE
Sbjct: 89  DPSTSAFISIHNMATWLIASYGTDAVRAQWGEAMTSG-------------ARLGSYCLTE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +  
Sbjct: 136 PGSGSDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A
Sbjct: 195 ADAPGISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLGKEGEGFKMAMKALDGGRINIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D
Sbjct: 255 ACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A +   + K +      A+  +A++  GG GYI E  I R  R+S  + 
Sbjct: 315 AGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHR 368

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFE 466
           IL G+   M + V   L  G     
Sbjct: 369 ILEGTNEVMRMIVARHLLNGEEELR 393


>gi|91974836|ref|YP_567495.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
 gi|91681292|gb|ABE37594.1| Isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5]
          Length = 392

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 22/376 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     ++    PA   + R+    GL     D ++        AH I    +   +   
Sbjct: 32  PRAYAIEQANDFPA--DIWRKFGSMGLLGITVDEAYGGSGLGYFAHIIAMEEISRASAAV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E                 L ++E   
Sbjct: 90  GMSYGAHSNLCVNQIHRNGTEAQKQRYLPKLVSGEN-------------VGALAMSEAGA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K+           W  + P +D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKLRADKVGSNFVLNGTKMWITNGPNADTLVVYAKTDPAAKSKGITAFIVERDF 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F N        L      V  +   +  + A+M+   
Sbjct: 197 KGFSTSPKLDKLGMRGSNTCELVFDNCEVPEANVLGEVGQGVRVLMSGLDYERAVMAAGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M   L   + YAR R   G  + +   ++  +AD+      A A  + +A + D   
Sbjct: 257 VGIMAACLDLVVPYARDRKQFGQPIGEFQFIQGKLADMYTAQMTARAYLYGVARAID--- 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +  +   AR        +  + A  V AEA++ +GG+GY+ E    R++R++    I  
Sbjct: 314 GKVLQGQAARKDCAAVILYAAEQATKVAAEAIQIMGGNGYVNECPAGRYWRDAKIFEIGA 373

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 374 GTSEIRRMLIGREIVR 389


>gi|114566326|ref|YP_753480.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337261|gb|ABI68109.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 380

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 144/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD    +P     +++    GL        +         +   A          
Sbjct: 26  PYASEWDNNHIYPE--DCIKKMHEVGLMTIGVPAEYGGAGLDHTAQNIVAEEICWGDAGV 83

Query: 149 GHLMSPSVTSASMVALMTTP-RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +M  S   AS   L+       K++  ++   E                   LTE   
Sbjct: 84  GTVMVASTLLASDPVLVAANHEQKKEFYGRLLDGE--------------LAAFCLTEPGA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   I ++  K  D  Y L+G K F+S+   +  + +LA ++ ++G   +   + D +
Sbjct: 130 GSDAGGIATRCVKSGDE-YILNGSKQFISNGGTAGVYTVLATLDKKMGTKGMCAFIVDRN 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G+   + ++K+G R++ T E+ F +        L           I+  LD +  S++
Sbjct: 189 TPGITVGKTEDKLGIRTSNTTEVIFEDVRVPAKNLLGTEGQGF--YIIMKTLDLSRASIA 246

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M   +++A       Y++ R   G  +     ++  +AD+A+ I A+  L    ++  D
Sbjct: 247 AMATGVSQACLDASLEYSKLRTQFGKPICSFQAIQFKLADMAMRIEASRLLYLEASSLQD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R          A + K +    A     EA++  GG GY ++  + ++YR++    
Sbjct: 307 MNVPR------FSKAASLAKAYAGDTAVFCATEAVQVFGGYGYTKDYPVEKYYRDAKIFQ 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+G    L +   L +G
Sbjct: 361 IYEGTGEVQRLVIAGDLLRG 380


>gi|288930013|ref|ZP_06423854.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288328672|gb|EFC67262.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 569

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 90/433 (20%), Positives = 164/433 (37%), Gaps = 43/433 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L  +   GL      R +  +         A+ +   A     ++ S        + 
Sbjct: 92  FENLDATRKAGLWGISMPRRYGGLNLPITPYSMASEMMATADAGFQNIWS-LQDCIETLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
                   K + P++   E               + + LTE   G+D+ ++  +      
Sbjct: 151 EFGDEEQRKKYIPRVCQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG + ++G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G 
Sbjct: 197 DGCWLINGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRQGGVTVRHIENKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L G+  +     V  +     L  A  SV   + +  E ++YAR
Sbjct: 257 HGSPTCELVYKNAKAELCGETRLGLIKYVMALMNGARLGIAAQSVGVSQAAYTEGLNYAR 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEA 390
            R      +ID P +   +A +   + A  ++ ++ A   D          E K  SEE 
Sbjct: 317 ERRQFETNIIDFPAVYDMLARMKAKLDAGRSILYQTARYVDVYKALDDIARERKLTSEER 376

Query: 391 A-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A        A    P+ K    + A     +A++  GGSG+I E    R YR++   SI 
Sbjct: 377 AEQKKYMRLADAFTPLAKGMNSEYANQNAYDAIQIHGGSGFIMEYKSQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKE- 496
            G+    V+  +  +  GT L       E   +   Q L     K++    +S++  KE 
Sbjct: 437 EGTTQLQVVAAIRYITNGTYLGIMKEMLEDEVAENLQPLKERVAKLVERYEESVNNVKEC 496

Query: 497 -DKGLARFLTEKI 508
            ++    FL  ++
Sbjct: 497 GNQDRQDFLARRL 509


>gi|116054233|ref|YP_788677.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589454|gb|ABJ15469.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 598

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 86/488 (17%), Positives = 175/488 (35%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E ++        L+      G  +D   V     +     + +  G +    
Sbjct: 36  DMVAAILDEGSKFCEQVLAPLNRSGDEEGCHFDNGVVTTPKGFKEAYAQYVEGGWNGVAS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   + +  G     +  + S +    +      +  ++ +
Sbjct: 96  DPAYGGQGLPHSLGLLLSEMIGSSNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   GTD+  I ++    +DG + +SG K F+S+   
Sbjct: 156 GTWTGT-------------MCLTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEH 202

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G+ N +    +++K+G +++
Sbjct: 203 DLSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L + +  +     S   A+ YAR R  
Sbjct: 263 ATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        AL++  A   D      +A  R
Sbjct: 323 MRSLTGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAER 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A     + PI K +  +    V    M+  GG GYI E  + +  R+     I  G+
Sbjct: 383 ERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + Q   +  +     L+  ++           L
Sbjct: 443 NGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQAEH--PQLKGQVAQLAALNAQWGEL 500

Query: 505 TEKIALAS 512
           T+++ LA+
Sbjct: 501 TQQVGLAA 508


>gi|218291431|ref|ZP_03495357.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238721|gb|EED05939.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 377

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 133/376 (35%), Gaps = 32/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    + R+    G         +            A      A    
Sbjct: 26  PHAAEWDRTEHFPI--EVFRKMGELGFLGLPIPEEYGGAGADMISYCLAVEEIGRACGGT 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G      V+ A   + L  T    + +               PM +       GLTE   
Sbjct: 84  GLSYEAHVSLACTPILLYGTEEQKRKYL-------------VPMARGEALGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D     +      D  + ++G+K F ++     +++L  V        +   +     
Sbjct: 131 GSDAGGTRTTAVLEGDE-WVITGNKIFNTNGGYAKYVVLTAVTDPAS-RGISAFIVPTDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +   K+G R++ TVEL   +        L       +    L  LD   ++++ 
Sbjct: 189 EGFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPLNAGFKQF--LSTLDGGRVAIAA 246

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V +A A     + YA+ R   G  +     ++  +AD+A+ I  A     + A   D+
Sbjct: 247 LAVGIARAAFETALAYAKTRVQFGQAISKFQAIQHKLADMAMHIDLARNAVMKAAWLKDQ 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EA+YA       K +  +M      +A++ +GG GY+ E  + RHYR++    I
Sbjct: 307 GRPYTLEASYA-------KLFASEMCTRTCEQAIQILGGYGYMREYPVERHYRDAKLIEI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 360 GEGTSEIQRLVIARQL 375


>gi|254429459|ref|ZP_05043166.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195628|gb|EDX90587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 591

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 87/505 (17%), Positives = 176/505 (34%), Gaps = 66/505 (13%)

Query: 63  EYVLSCTAQELARMAN-YNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSI 119
           + +     +E  +M      P        G  W+  +V     +    +    +G     
Sbjct: 36  QDLSDAILEEAGKMTEGLLFPLNRNSDEQGCTWNDGEVTTPDGFKDAFKTFAENGWSAFS 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  F      ++  +    +   A        + +  +   V    +  +   + PK++
Sbjct: 96  GNPEFGGQGMPKSLAVLFEEMMHSACSSFALYPALTSGACLAVDAHASEELKGQYLPKLY 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE   GTD+  + ++     DG + ++G K F++   
Sbjct: 156 SGEWSGT-------------MCLTEPHSGTDLGILRTKAVPNDDGSFNITGTKIFITGGE 202

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++         +  FLVP+ L D     G  NG     +++K+G + 
Sbjct: 203 HDLTGNHIHLVLAKLPDAPAGSKGISLFLVPKFLPDADNNPGEANGATCGSIEHKMGIKG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F +  G+++G+ N     +  M     L   +  +     S   A+ YAR R 
Sbjct: 263 SATCVMNFDDAKGWIIGEPNQGLACMFTMMNYERLSIGLQGLGLGEASYQSAVEYARERL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
                            +I    ++R + ++        AL+  +    D      +A +
Sbjct: 323 QGRSATGAKNPEGPADPIIVHGDVRRMLMNMRAINEGGRALAAYVGMQLDTSKFSEDADA 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + +      ++ PI K +             +  GG GYI E  + +  R+   + I  G
Sbjct: 383 KKKAEDRVALLTPIAKAFFTDRGLDTTITGQQVFGGHGYIREWGMEQFVRDCRISQIYEG 442

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           +     LD+    +   G    +   +  +  + ++           ++  KED   A  
Sbjct: 443 TNGIQALDLAGRKVARNGGKSVDAFLADAQAWVDANADNA------QLAAVKEDLQAA-- 494

Query: 504 LTEKIALASSA--AALYRAGMNDIA 526
               +AL  S+    L +AG N  A
Sbjct: 495 ----LALLKSSTDTLLAQAGDNPDA 515


>gi|307195515|gb|EFN77401.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 340

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 18/326 (5%)

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL   +    +     ++  ++++  +  +      K  + +       P   +      
Sbjct: 22  YLAYAIAMEEISRGCASTGVIMSVHNSLYLGP--LDKFGNDKQKEKYIVPYLNSEKIGCF 79

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            L+E   G+D  A ++ G+   D         W  ++  +   I+ A  +       +  
Sbjct: 80  ALSEPGNGSDAGAASTVGKANGDTFIINGTKAWITNAFEAGGIILFAATDKAKKHKGISA 139

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
            + D    GL   + ++K+G R ++T  L F +          +        KI ++ LD
Sbjct: 140 FIVDSPTVGLTLGKKEDKLGIRGSSTCSLIFEDCEVPKDQ---ILGEEGMGFKIAMMTLD 196

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + ++G  + +A+     A+ YA +R   G  +I    +++ IAD+AL +  +  L++
Sbjct: 197 AGRIGIAGQALGIAQASLDCAMEYASKRQAFGAPIIKLQSIQQKIADMALRVDGSRLLTW 256

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  K  ++EAA A++ A  T  +C         + ++ +GG GY+ +    RHY
Sbjct: 257 RAAQMKDAGKPFTKEAAMAKLSASETATFC-------AHQCIQILGGMGYVTDMPAERHY 309

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+     L +   L K
Sbjct: 310 RDARITEIYEGTSEIQRLVIATNLIK 335


>gi|91789797|ref|YP_550749.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91699022|gb|ABE45851.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 598

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 86/454 (18%), Positives = 159/454 (35%), Gaps = 64/454 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G      D  +          +      +M        M P 
Sbjct: 74  EVTPPKGFKEAYAKYVEGGWAALSCDPEYGGQGLP--FVVNQCFYEMMNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    T    K + PK+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAHGTDEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +   DG Y L+G+K F+S+   D       ++LA++         +  F VP+  
Sbjct: 179 LRTKAEPQPDGTYKLTGNKIFISAGEHDMTSNIVHLVLARLPDAPQGSKGISLFAVPKFN 238

Query: 263 EDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
            +        NG+    +++K+G   N+T ++   +  G ++G  N     +  M     
Sbjct: 239 VNKDGSLGARNGIYCGGIEHKMGIHGNSTCQMVLEDAVGTMVGAPNKGLAAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P +++ +      
Sbjct: 299 LGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIVHPDVRKMLLTAKAY 358

Query: 366 IAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                AL+       D      + K R E      ++ PI K +            M+  
Sbjct: 359 AEGGRALAIYCTLLLDKELHHPDEKVRKESGEIVALLTPIVKAFLTDNGHIATNACMQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG G+I+E  + +  R++  N I  G+     LD+L     G N             G++
Sbjct: 419 GGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNN-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            KK   ++   I     ++ +A F+     LA  
Sbjct: 466 LKKFGKLIGALIEEEGVNEKMAEFINPLAYLADQ 499


>gi|89092335|ref|ZP_01165289.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083423|gb|EAR62641.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 389

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 70/357 (19%), Positives = 124/357 (34%), Gaps = 23/357 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           ++    G         +            A      A       MS +   A ++  M T
Sbjct: 49  KKLAELGFMGLNIQGEYGGTEAGVVSFSLAMTEIARACASTAVTMSVTNMVAEVIQAMGT 108

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + P I S E+             A    LTE   G+D A++ +Q  K +DG   
Sbjct: 109 EEQKNKYLPLICSGEF------------AAGSFCLTESGAGSDPASMRTQAVKTADGFSI 156

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
               +W  S+  +  F++ A  +        +   L D    G+     + K+G   +AT
Sbjct: 157 SGTKQWITSAEFAGVFVVWAVTDPEAKKGKGITCFLVDADAPGITVGPAEKKMGQHGSAT 216

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+ F N        LG LN              +    +++     ++  A  Y   R 
Sbjct: 217 NEVHFDNVEVPESAILGKLNDGFRLAVAELAGGRIGIGSLALGVGLAAMGYATAYTTERK 276

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D   ++  IAD   ++ AA  L    A+  +     ++EA+ A       K +
Sbjct: 277 QFGRPISDFQGLQWTIADRYTELEAARLLLMSAADRKERGLPFAKEASMA-------KVF 329

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + A      A++ +GG GY++E  + R  R+    SI  G+     L +   + +
Sbjct: 330 ASEKANQACYSALQLLGGYGYMQEYPLERFARDVRITSIYEGTSEVQRLIIAREILR 386


>gi|224053133|ref|XP_002189490.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain
           [Taeniopygia guttata]
          Length = 549

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 137/370 (37%), Gaps = 17/370 (4%)

Query: 96  KVEFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGHLMS 153
           +    P    +   + + + +   ++++    +   + +    A  + ++  +E    + 
Sbjct: 190 QERVAPFVQKMDENAKMEESIVQGLFEQGLMSIELGEEYGGTGASFFSIILAVEELAKVD 249

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           P+V     +    T ++   +       E       P           L+E   G+D  +
Sbjct: 250 PAVALVCELQNTLTNKLFTTY-----GTEEQKRTYLPRVSKDTLGSFCLSEAGSGSDAFS 304

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++ +K  D         W   +  +  F ++A      G   +   + D +  GL   
Sbjct: 305 LKTRAEKKGDYYIINGSKMWISLAEDAGVFFVMANTNPSSGYRGITCFVVDRNTEGLHVG 364

Query: 274 RLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           + ++K+G R+ +T  + F N        LG +         M     +  A   +   + 
Sbjct: 365 KKEDKLGIRACSTCPVTFDNVKVPESNILGQVGQGYKYAIGMLNTGRIGIAAQMLGLAQG 424

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                I Y + R   G  + D   M+  IA +A  + AA  L++  A   +  +   +EA
Sbjct: 425 CFDRTIPYTKERVQFGKSVFDFQGMQHQIAQVATQLEAARLLTYNAARLAEAGRPAIKEA 484

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       KY+  ++A    ++ +E +GG G+ +   I ++YR+    +I  G+ N  
Sbjct: 485 SMA-------KYFTAEVATLTTSKCIEWMGGVGFTKNYPIEKYYRDCKIGTIYEGTSNIQ 537

Query: 451 VLDVLNLLEK 460
           +  +   L +
Sbjct: 538 LSTIAKFLAQ 547


>gi|195588795|ref|XP_002084143.1| GD12977 [Drosophila simulans]
 gi|194196152|gb|EDX09728.1| GD12977 [Drosophila simulans]
          Length = 420

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 152/431 (35%), Gaps = 37/431 (8%)

Query: 38  SSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
             D  L     +A++P        + G        +E+A   N+   +L    P  +  D
Sbjct: 16  RGDRPLSWTRTLAHYPVND----AMFGLDEDRQKLREVAF--NFFQKELA---PLAKEID 66

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           K++         ++    G      +  F         H I        A   A    + 
Sbjct: 67  KLDNFKDMRPFWKKLGDLGFLGITAEPDFGGTGGSYLDHCIIMEEFSRAAGGVALSYGAH 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    TP   + + PK+ S E+               GL ++E   G+D+ ++
Sbjct: 127 SNLCINQLTKNGTPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSM 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCY 272
             + ++  D         W  +   +D  I+ A+  G        +   + + +  G   
Sbjct: 174 KLRAERKGDYYVLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWEGFSV 233

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +  +K+G R ++T EL F +       +LG  N     +        L  A   V  M+
Sbjct: 234 AQKLDKMGMRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQ 293

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA +R     ++ +  +++  +AD+  +++A  +  + +A S D      ++
Sbjct: 294 AACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTNLSACRSYLYTVARSCDAGNRSPKD 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                        +  + A  V  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 354 -------CAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEI 406

Query: 450 MVLDVLNLLEK 460
               +   L +
Sbjct: 407 RRWLIGRQLNQ 417


>gi|254695350|ref|ZP_05157178.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|261215723|ref|ZP_05930004.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|260917330|gb|EEX84191.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 384

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 136/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  +  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGN-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + +A  R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAHALDRKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD    I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGKPIADFQLIQAMLADSKAQIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 325 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 383


>gi|322698244|gb|EFY90016.1| acyl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102]
          Length = 447

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 147/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E   A  +++++    GL        +          I        A    
Sbjct: 90  PKARDMDEAEDMDA--SIVQQLFEQGLMGVEIPEEYGGAGMNFTSAIIGIEELARADPSV 147

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  +   +   +  + K W PK+               T+      L+E   
Sbjct: 148 SVLVDVHNTLCNTAVIKYGSEALKKKWLPKL--------------ATNTVASFCLSEPVS 193

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++ ++ +DG     G  W  +S  +  FI+ A ++   G   +   + +   
Sbjct: 194 GSDAFALATRAEETADGFKINGGKMWITNSKEAGFFIVFANLDPSKGYRGITAFVVEKGT 253

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    + + K+G R+++T  L F +    ++   N+        K  I  L+   + ++
Sbjct: 254 PGFSIAKKEKKLGIRASSTCVLNFDDV---VVPKENILGERGHGYKYAIGLLNEGRIGIA 310

Query: 327 GMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                LA      A+ Y    R   G ++ +   M+  IA    +IAAA AL +  A   
Sbjct: 311 AQMTGLALGSFENAVKYVWNDRRQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKK 370

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    +++R+S   
Sbjct: 371 EAGEDFVKDAAMA-------KLYASQVAGRVAGLAVEWMGGMGFVREGLAEKYWRDSKIG 423

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+ N  +  +  LL+K
Sbjct: 424 AIYEGTSNIQLNTIAKLLQK 443


>gi|281420471|ref|ZP_06251470.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205]
 gi|281405244|gb|EFB35924.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205]
          Length = 567

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/432 (20%), Positives = 168/432 (38%), Gaps = 42/432 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L  +   GL      R +  +    A    A+ +   A     ++ S        + 
Sbjct: 92  FENLDATRKAGLWGLSMPRRYGGLNLPNAIFSMASEIIAAADAGFQNIWSLQSC-IDTLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P+I + E               + + LTE   G+D+  +  +  +  D
Sbjct: 151 EFGSEEQRQKYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKATQDED 196

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G  
Sbjct: 197 GTWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRDGGVTVRHIEHKLGIH 256

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N+   L G+  +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 257 GSPTCELVYKNSKAELCGNTRLGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKE 316

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---------- 391
           R   G  +I+ P +   ++ +   + A  +L +  A   D  K+  + A           
Sbjct: 317 RAQFGEKIINFPAVYDMLSRMKAKLDAGRSLLYCCARYVDIYKALEDIARDTKLTPEERQ 376

Query: 392 -------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +A+   GGSG+I E    R +R++   SI  
Sbjct: 377 EMKKYTRLADAFTPLAKGMNSEYANQNAYDAISIHGGSGFIMEYKCQRLFRDARIFSIYE 436

Query: 445 GSGNAMVLDVLNLLEKGTNLF---EQLFSTLEQDLGS---SGKKVITILRDSISLCKE-- 496
           G+    V+  +  +  GT L    E L S + +DL        K++ +   +I+  KE  
Sbjct: 437 GTTQLQVVAAIRYITNGTYLSIIKEMLESEVSEDLKPLKERVAKLVDLYEAAINKVKEAN 496

Query: 497 DKGLARFLTEKI 508
           D+ +  FL  ++
Sbjct: 497 DQAIHDFLARRL 508


>gi|322791487|gb|EFZ15884.1| hypothetical protein SINV_11461 [Solenopsis invicta]
          Length = 414

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 129/361 (35%), Gaps = 29/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMV 162
           L ++   +GL        +          I    +  +++++    +   +    + S++
Sbjct: 74  LFQKLFENGLMGIEIPTEYGGTGSNFMSTI--LTIEEISKVDMAVSVPVDIHNTLTNSLI 131

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             + +    + + P++                       LTE   G+D  ++ ++ +K+ 
Sbjct: 132 LKIGSEEQKRKYLPRL--------------ARDSLSSFCLTEPGSGSDAFSLKTEARKVG 177

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W  +S ++  F++ A  +   G   +   L D    GL   + ++K+G R
Sbjct: 178 AEYVINGTKMWISNSDIAQIFLVFANADPSAGYRGITTFLVDRDTPGLTVDKPEDKMGIR 237

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  + F +     G LLG                 +      +   +  L   I Y 
Sbjct: 238 ASGTCMVHFDDVKIPEGNLLGKFGHGYKYAAGFLNEGRIGIGAQMIGAAQGCLDATIPYT 297

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  IA    ++  A  L +  A   +  K   +EAA A      
Sbjct: 298 LDRKQFGQDIFSFQSLQHQIAQAVTELQCARLLVYNAARLVEAKKDFMKEAAMA------ 351

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K++  + A  + A+ ++ +GG G+  +    ++YR+    +I  G+ N  +  +   + 
Sbjct: 352 -KFFASETACRITAKCIDFMGGVGFTTDFPQEKYYRDVKIGTIYEGTSNIQLSTIAKCIR 410

Query: 460 K 460
           K
Sbjct: 411 K 411


>gi|262371050|ref|ZP_06064372.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262313936|gb|EEY94981.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 593

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 89/532 (16%), Positives = 188/532 (35%), Gaps = 58/532 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWDK--VEFHPAWHALLRRSIH 112
           + L  +         +E+A+ A   T  L       G  +    V     +    ++   
Sbjct: 29  ENLAHVDSATAEAILEEMAKFAQNVTLPLNRTGDEEGATFSNGAVTTPAGFKEAFKQYAE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  +      +   + A  +              SV +   +    +    +
Sbjct: 89  GGWIGLAADEEWGGQGMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKE 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PKI+S E+  T             + LTE   GTD+  I ++ ++  DG Y ++G K
Sbjct: 149 TYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    D       ++LA+          +  F+VP+ L +     G  N      ++
Sbjct: 196 IFITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSVGERNAAGPGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    G+L+G  N     +  M     L   I  +     +   A 
Sbjct: 256 HKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAA 315

Query: 337 HYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA  R                  ++    ++R + +   +  A+ A +  +    D  K
Sbjct: 316 QYATDRLQGRSASGVQSPAKPADSILVHGDVRRMLLNARANNEASRAFAVYVGQQLDITK 375

Query: 385 SRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++  A         ++ PI K +    A     +A    GG GYI E  + +  R+  
Sbjct: 376 FSTDPEAVKAANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435

Query: 439 ANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISLCK 495
              I  G+      D++    ++ G        + + +D  +S    +  ++D+ +    
Sbjct: 436 IAQIYEGTNGVQSQDLIGRKTIKCGGAFIADYITEI-RDFANSLDADLNFIKDATLDAAT 494

Query: 496 EDKGLARFLTEKIALAS----SAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
           E + + +++ E+ A ++    +AA  Y   +  ++  ++  R  +   +   
Sbjct: 495 EVEEVTKYILERAAESAEFPNAAAVDYLHAVGLLSFAYMFARIANAAKAKDG 546


>gi|289650649|ref|ZP_06481992.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 592

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 169/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|149180899|ref|ZP_01859401.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1]
 gi|148851418|gb|EDL65566.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1]
          Length = 379

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W++    P   +   +    G  C   D  +          +             
Sbjct: 27  PFYDQWEEERMIP--RSFWTKMGDQGYLCPDIDEQYGGSEVDWGFSVIINEEIERVGSGL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +    T    K W PK  + E+                + +TE   G
Sbjct: 85  VGIGLHNDIVVPYITSYGTEEQKKRWLPKCTTGEF-------------ITAIAMTEPGTG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSP 267
           +D+A I +      +  Y L+G K F+++ +    I++A + + +     V  L+ +   
Sbjct: 132 SDLANIKTTAVLKGNH-YILNGQKTFITNGIHSDLIVVACKTDPKAKHKGVSLLVVERDM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R  NK+G  S  T EL F +       LLG+       + +      L  AI +
Sbjct: 191 TGFSRGRKLNKVGLHSQDTAELIFEDCVVPKENLLGEEGKGFIYLMEKLQQERLLVAIAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +   V L + I Y + R   G  +      +  IA++A +I    A   +L     E +
Sbjct: 251 QAASEVMLKQTIDYVKSRDAFGKPVSKFQNTQFKIAEMATEIEMTRAFLDQLIAEHIEGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   + + A+             A  + AE M+  GG GY+EE  IAR +R+ P  SI  
Sbjct: 311 NIVTKVSMAKWKM-------TDTAKKIAAECMQLHGGYGYMEEYEIARRFRDIPVASIYA 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 364 GTNEIMKTIIAKNL 377


>gi|332305778|ref|YP_004433629.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173107|gb|AEE22361.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 389

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 131/363 (36%), Gaps = 24/363 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L  +    GL        +    +   AH I    +   +        + S    + + 
Sbjct: 47  QLWPKLGEMGLLGVTVAEQYGGSNMGYLAHVIAMEEVSRASAGIGLSYGAHSNLCVNQIH 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                L ++E   G+D+ ++  +  K  D
Sbjct: 107 KNGSDAQKEKYLPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRADKKGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D F++ A+ +   G   +   + +    G    +  +K+G RS
Sbjct: 154 HYVLNGNKMWITNGPDADVFVIYAKTDVSAGSKGMSAFIVERGTPGFSQAQKLDKLGMRS 213

Query: 284 NATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +          +       +        L  +   +  M+  +   + Y  
Sbjct: 214 SNTCELVFEDCSVPAQNLIRNEGDGARVLMSGLDYERLVLSGGPLGIMQACMDLVVPYIH 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +  +++  +AD+   + AA A  + +A + D  ++  ++AA         
Sbjct: 274 DRKQFGQSIGEFQLIQGKVADMYTQMNAARAYVYTVARACDRGETTRKDAA-------AV 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  ++A  +  +A++ +GG+GYI E    R  R++    I  G+     + +   L K
Sbjct: 327 ILYSAELATKMALDAIQLLGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFK 386

Query: 461 GTN 463
            + 
Sbjct: 387 ESA 389


>gi|330503596|ref|YP_004380465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917882|gb|AEB58713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 375

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 130/374 (34%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    PA    +      G    +  + +            A           
Sbjct: 24  PFAADWDREHRFPA--EAIAEMGSLGFMGMLVPQQWGGAETSNLAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   M  L   +    + +   + S E                   LTE + 
Sbjct: 82  STIMSVHNSVGCMPILKYGSEEQKQRFLHPLASGEM-------------LGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + + ++ ++  +        ++  S   +   I+ A  + + G   +   +     
Sbjct: 129 GSDASDLRTRARREGEHYVLDGAKQFITSGSHAGMVIVFAVTDPQAGKKGISAFIVPTDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R+++K+G  ++ T +++F          LG+                +  A  +
Sbjct: 189 PGFSVVRVEDKLGQHASDTCQIQFDAVRIPDSLRLGEEGEGYRIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  +I+   +   +AD+A  IA A  +    A+  +  +
Sbjct: 249 VGMARAAFEAARDYAHERVTFGKPIIEHQAVAFRLADMATQIAVARQMVHHAASLREAGQ 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+++  + R YR+     I  
Sbjct: 309 PCLTEASMA-------KLFASEMAEKVCSAAIQTLGGYGYLKDFPVERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDVQRMVIARSL 375


>gi|299753045|ref|XP_001833025.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
 gi|298410118|gb|EAU88714.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130]
          Length = 438

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 137/390 (35%), Gaps = 42/390 (10%)

Query: 89  PGGERWDKVEFHPA---------------WHALLRRSIHDGLHCSIWDRSFEPVVRKQA- 132
           P  E  DK    P+                  +  +    GL        +  +      
Sbjct: 61  PRAEEIDKTNTFPSVSLPNPYTSQRALTSSKDVWTKLGDMGLLGITVSPQYGGLGLGYFQ 120

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H +    L   +   A    + S    + +    T +  + + P + S            
Sbjct: 121 HTLAMEALSTASGSVALSYGAHSNLCVNQIHRHGTEKQKEKYLPDLISGV---------- 170

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                  L ++E   G+D+ ++  +  K+  G        W  + P++   ++ A+    
Sbjct: 171 ---KVGSLAMSETGSGSDVVSMKLRADKVKGGYKLNGNKFWITNGPVASTLVVYAKTSPD 227

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   + +    G    +  +K G R + T EL F +     +   NV        
Sbjct: 228 KGSKGITAFIVEKGMPGFSTSQKLDKFGMRGSDTCELVFEDCVVPEVVAENVLGQVDRGA 287

Query: 313 KILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            +L+  LD   + +SG     M+ +   A+ Y   R   G  +    +M+  IAD+   +
Sbjct: 288 AVLMSGLDLERIVLSGGPLGLMQAAFDYAVEYVHDRKQFGQPVGTFQLMQAKIADMYTKL 347

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +A+ A  + +A + D+ +   ++ A A         +  + A  V  E M+C+GG+GYI 
Sbjct: 348 SASRAYVYAVARACDQGRISRKDCAGA-------ILYSTEKAVEVTLEGMQCLGGNGYIN 400

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +    R  R++   ++  G+     + +  
Sbjct: 401 DYPTGRLVRDARLYTVGAGTQEIRRMLIGR 430


>gi|295699906|ref|YP_003607799.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439119|gb|ADG18288.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 393

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 146/409 (35%), Gaps = 39/409 (9%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +E+E+L + + S  A+E+A              P     D+ +  P    L R+    G+
Sbjct: 13  EEIEMLRDSIASFAAKEIA--------------PRAGEIDRTDQFPM--DLWRKFGDLGV 56

Query: 116 HCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +    +   AH +    +   +        + S    + +    T    + +
Sbjct: 57  LGMTVSEEYGGANMGYTAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGTEAQKRKY 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  + +K  D         W 
Sbjct: 117 LPKLVSGEH-------------VGALAMSEPNAGSDVVSMKLRAEKKGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +       +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDTLVVYAKTDPEANSRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGIL 349
                  L    G V+ +  +  LD     ++G    +  A     + Y   R   G  +
Sbjct: 224 EVPEENILGTLNGGVKVL--MSGLDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFGQSI 281

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +++  +AD+   + A  A  + +    D     ++     R        +  + A 
Sbjct: 282 GEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT--LGNDHVRQVRKDCAGVILYTAEKAT 339

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 340 WMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|109899232|ref|YP_662487.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
 gi|109701513|gb|ABG41433.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 389

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 139/366 (37%), Gaps = 30/366 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L  +    GL        +    +   AH +    +   +        + S    + + 
Sbjct: 47  QLWPKLGEMGLLGVTVAEQYGGSNMGYLAHVVAMEEVSRASAGIGLSYGAHSNLCVNQIH 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                L ++E   G+D+ ++  +  K  D
Sbjct: 107 KNGSDAQKEKYLPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRADKKGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D +++ A+ +   G   +   + +    G    +  +K+G RS
Sbjct: 154 HYVLNGNKMWITNGPDADTYVIYAKTDISAGSKGMSAFIVERGTPGFSQAQKLDKLGMRS 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIH 337
           + T EL F +         N+     +  ++L+  LD   + +SG     M+  +   + 
Sbjct: 214 SNTCELVFEDCPVPA---ENLIRNEGDGARVLMSGLDYERLVLSGGPLGIMQACMDLVVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  + +  +++  +AD+   + AA A  + +A + D  ++  ++AA      
Sbjct: 271 YIHDRKQFGQSIGEFQLVQGKVADMYTQMNAARAYVYTVARACDRGETTRKDAA------ 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GYI E    R  R++    I  G+     + +   
Sbjct: 325 -AVILYSAELATKMALDAIQLLGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 LEKGTN 463
           L K + 
Sbjct: 384 LFKESA 389


>gi|62317682|ref|YP_223535.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269665|ref|YP_418956.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022933|ref|YP_001932674.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237817228|ref|ZP_04596220.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254691180|ref|ZP_05154434.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254695516|ref|ZP_05157344.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254698963|ref|ZP_05160791.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699703|ref|ZP_05161531.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254732411|ref|ZP_05190989.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256015230|ref|YP_003105239.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|256256366|ref|ZP_05461902.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260544917|ref|ZP_05820738.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756781|ref|ZP_05869129.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760212|ref|ZP_05872560.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763450|ref|ZP_05875782.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882598|ref|ZP_05894212.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261215906|ref|ZP_05930187.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261750168|ref|ZP_05993877.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|297249726|ref|ZP_06933427.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197875|gb|AAX76174.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82939939|emb|CAJ12957.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021507|gb|ACD74228.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237788041|gb|EEP62257.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|255997890|gb|ACU49577.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260098188|gb|EEW82062.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670530|gb|EEX57470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673871|gb|EEX60692.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676889|gb|EEX63710.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260872126|gb|EEX79195.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917513|gb|EEX84374.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261739921|gb|EEY27847.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|297173595|gb|EFH32959.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 375

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|330970884|gb|EGH70950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 592

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 92/481 (19%), Positives = 171/481 (35%), Gaps = 55/481 (11%)

Query: 56  KELELLGEYV----LSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLR 108
            +L  L E V    +    +E  ++ +     L       G  W D V   PA      +
Sbjct: 26  AQLPELAETVDVETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYK 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      +  F  +   +    +   +   A L  G     +  +   +    T 
Sbjct: 86  IYAEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHATE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ELKNKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F++    D       ++LA++         +  FLVP+ +       G  N +  
Sbjct: 193 TGSKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S 
Sbjct: 253 GSIEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YA+ R  S               +I  P ++R +  +        A S  +A   
Sbjct: 313 QAAVEYAQDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQL 372

Query: 381 DEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D AK      +R        ++ P++K +   +         +  GG GYI E    +  
Sbjct: 373 DIAKFSEDDTARKRADDLVALLTPVSKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           R+     I  G+     LD++     G+N  F QLFS   +   +     ++     +S 
Sbjct: 433 RDVRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFITGSDNALSEFTQPLSK 492

Query: 494 C 494
            
Sbjct: 493 A 493


>gi|332185453|ref|ZP_08387201.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332014431|gb|EGI56488.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 380

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 148/402 (36%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +E+  +A   T       P    WD+    P     +R +   G        
Sbjct: 3   QFDLTDEQREIQDLARRFTA--DRITPFAAEWDEKHIFP--RDTIREAAELGFAAIYVSE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +                    +S    ++ M+       V   + P + + +
Sbjct: 59  ESGGIALGRLEAALIMEAMAYGCPSTSAFISIHNMASWMIDRFGDADVKGRYLPDLVTMD 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D AA+ ++  +  D  Y +SG K F+S    + 
Sbjct: 119 RM-------------ASYCLTEPGSGSDAAALKTRAVRDGDH-YVVSGSKQFISGGGENE 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +     G  G   +  L+ D    G+ +   + K+G  S  T ++ F N    +   L
Sbjct: 165 VYVTMVRTGEDGPKGISCLVIDKDTPGVSFGANERKLGWHSQPTRQVMFDNVRIPVANRL 224

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    L+    S+ G +  L EA+ Y + R   G  + +    +  +
Sbjct: 225 GAEGEGFRIAMMGLDGGRLNIGACSLGGAQRCLDEAVAYVKDRRQFGKAIAEFQNTQFTL 284

Query: 360 ADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           AD+A ++ AA AL +  A    D A  ++  AA A+ +A            +V+  A++ 
Sbjct: 285 ADMATELEAARALLYLAAAKVTDNAPDKTRFAAMAKRLA-------TDTGSSVVDRALQL 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY+ +  I R +R+   +SIL G+   M + V   L K
Sbjct: 338 HGGYGYLMDYPIERFWRDLRVHSILEGTNQVMRMIVGRDLLK 379


>gi|261323300|ref|ZP_05962497.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261299280|gb|EEY02777.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 376

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 139/397 (35%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 6   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 63  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 118

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S   S+  I+ A
Sbjct: 119 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNSNVAIVFA 169

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 170 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 226

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 227 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 287 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 340 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 376


>gi|238024524|ref|YP_002908756.1| acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
 gi|237879189|gb|ACR31521.1| Acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
          Length = 392

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 132/374 (35%), Gaps = 22/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGELGVLGMTVGEEYGGANLGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGSEAQKRRYLPKLISGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +            W  + P  D  ++ A+ +   G   +   + +   
Sbjct: 137 GSDVVSMKLRADRRGSHYVLNGTKMWITNGPDCDTLVVYAKTDPEAGARGMTAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V+ +   +  + A+++   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENVLGEVGSGVKVLMSGLDYERAVLAGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   L   + Y   R   G  + +  +++  +AD+  +  A  A  + +    D A 
Sbjct: 257 TGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTNFQACRAYLYAVGRHLDAAG 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   +   AR        +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 317 SHVRQ---ARKDCAGVILYTAERATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGA 373

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 374 GTSEIRRMLIGREL 387


>gi|302689643|ref|XP_003034501.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8]
 gi|300108196|gb|EFI99598.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8]
          Length = 591

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 130/541 (24%), Positives = 216/541 (39%), Gaps = 54/541 (9%)

Query: 27  QPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCT---AQELARMANYNTP 82
           Q P +   N+Y++D +L +L+    P  + +ELE     +        +++ R    + P
Sbjct: 8   QIPPYEEGNSYTTDPVLQSLLKRILPDEIFRELEPDLVRLGDDINTVIRDIHRRGEVSDP 67

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            L  Y   G R D+++    W  L   +  +GL    ++R      R        AR+ +
Sbjct: 68  TLVQYDQWGRRVDRLQTSEGWRKLKAIAQKEGLPALFYERKHGEFSR----VDGFARVLM 123

Query: 143 MAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           M           S+T   A ++ LM TP + KD  P++ SR           + +   G 
Sbjct: 124 MTGDMHTIFCPISMTDGCARVIELMGTPAMKKDIFPRLISRN---------PEHAFTAGQ 174

Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-----YCLSGHKWFLSSPMSDAFIMLAQVEG---- 251
            +TE+ GG+D++   +              Y L G KWF S+  SD  + L +       
Sbjct: 175 WMTERPGGSDVSQTETVATSTGRAHEYGPAYTLDGFKWFSSATDSDVALALGRSGPASSG 234

Query: 252 --RVGCFLVPRLLEDGSPNGLC-------YQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
              +  FLVP          +          RLKNK G ++  T EL    T G+ +G  
Sbjct: 235 SRGLSLFLVPLRKPLLGDPAVSPISNNIFVHRLKNKFGTKALPTAELSLEGTEGYRVGPE 294

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIA 360
           N     +  +  +  + SA+ SVS +R SL  A  YA+ R + G   +L D P+    +A
Sbjct: 295 NQGVKLITPVLNITRVWSAVHSVSALRRSLFIATSYAKVRKIRGGAQLLQDTPLHVAQLA 354

Query: 361 DIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + L   A T  SF + +     +   + +EE    RIM P  K +  + A   IA+AM 
Sbjct: 355 SLHLTYRALTHFSFGVVHLLGKSEYGTASTEERHLLRIMTPTVKAFATEKAVPAIADAMS 414

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDL 476
            +GG+GY+EE  I R  R++    I  G+   + LD+   ++     +F     ++ Q +
Sbjct: 415 ALGGNGYMEENDIPRLLRDAMVERIWEGTTTVLSLDLARAMKGDAVGVFRTWAHSVLQAV 474

Query: 477 GSSGKKVIT-----------ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
             S K+ I             L D  +       + R     +    SA  L       +
Sbjct: 475 PPSVKEKIANEIQVLNACINELSDCFAAQTTTPLVPRPALMLMGCTLSALFLIEHARWSV 534

Query: 526 A 526
           +
Sbjct: 535 S 535


>gi|300692520|ref|YP_003753515.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           PSI07]
 gi|299079580|emb|CBJ52258.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
          Length = 595

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 91/486 (18%), Positives = 178/486 (36%), Gaps = 68/486 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHP-AWHALLRRSIHDG 114
             +    ++   +E  +  +     L+      G  +  D V   P  +    ++ +  G
Sbjct: 32  AEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFKEAYKQYVEGG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHK 172
                 D  +          I  A   ++        M P ++  +  AL    T  + +
Sbjct: 92  WPALGCDPEYGGQGLPI--LINNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQ 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S  +  T             + LTE   GTD+  + ++ + ++DG Y ++G K
Sbjct: 150 RYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPLADGAYAITGTK 196

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  F+VP+ + D     G  NG     ++
Sbjct: 197 IFISAGEHDLSENIIHLVLARLPDAPAGTKGISLFVVPKFIPDAAGNPGERNGAKCGSIE 256

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   NAT  +      G+++G+ N     +  M     L   +  +    V+   + 
Sbjct: 257 HKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSA 316

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA+ R                  +I  P ++R +           A ++ +A   D   
Sbjct: 317 AYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDREL 376

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +   R E A    ++ P+ K +    A     E M+  GG GYI E  + ++ R++ 
Sbjct: 377 SHPDEAQRKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDAR 436

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+     LD+L     G             D+G+  KK   I++D +     ++
Sbjct: 437 INMIYEGTNTVQSLDLLGRKILG-------------DMGAKMKKFGKIVQDFVEAEGTNE 483

Query: 499 GLARFL 504
            +  F+
Sbjct: 484 AMQEFI 489


>gi|56479154|ref|YP_160743.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56315197|emb|CAI09842.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 597

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/480 (20%), Positives = 183/480 (38%), Gaps = 67/480 (13%)

Query: 63  EYVLSCTAQELARMANYNT-----PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGL 115
           E V S     +   AN        P        G +WD  KV   P W    R+    G 
Sbjct: 31  EDVSSDLVDAILDEANKFASGILAPLNRVGDQEGAKWDHGKVTTAPGWKEAYRQFSEAGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +      +        ++  A +        +  +   VAL  +      + 
Sbjct: 91  TAVAGDPEYGGQGLPKLLSTAVMEMWKAANMAFSLCPMLTNGAIEAVALRGSDEQKAAYL 150

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+AA+ ++ +   DG Y L G K F+
Sbjct: 151 PKMISGEWTGT-------------MNLTEPQAGSDLAAVRTRAEPQGDGTYRLFGQKIFI 197

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKI 279
           +    D       ++LA++         +  F+VP+ L       G  N +    +++K+
Sbjct: 198 TYGEHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKFLLNADGTPGERNDVQCVSIEHKL 257

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  ++ T  L F +     G L+G+ N     +  M         +  ++    +   A+
Sbjct: 258 GIHASPTCVLAFGDSGGAIGTLVGEANRGLEYMFIMMNEARFAVGMEGLALSERAYQHAL 317

Query: 337 HYARRRHVS------GGI---LIDQPVMKRAIADIALDIAAATALSF------RLANSFD 381
            YA+ R         GG    ++  P ++R +  +     A  AL++       LA+   
Sbjct: 318 AYAKDRVQGTEAGVRGGPKVSILHHPDVRRMLMSMKSQTEAMRALAYVVGAATDLAHRHP 377

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A  R+++ A+  +M P+ K WC + +  + +  ++  GG G+IEE   A+H R++   +
Sbjct: 378 DAAVRAQKQAFVDLMIPVVKGWCTENSIDIASTGVQVHGGMGFIEEAGAAQHLRDARITT 437

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+      D++                + ++ G + + +I  +R       E +G A
Sbjct: 438 IYEGTTAIQANDLIG-------------RKIARENGVTVRALIGDMRAVQGQLAEQQGEA 484


>gi|332524728|ref|ZP_08400926.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
 gi|332108035|gb|EGJ09259.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
          Length = 392

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 141/400 (35%), Gaps = 23/400 (5%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +++L    + L R A           P     D+ +  P    L R+    G+       
Sbjct: 7   DFMLGDDIEAL-RDAVRAFAVAE-IAPRAAEIDRSDRFPM--DLWRKLGELGVLGITAPE 62

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        AH +    +   +        + S    + +    +    + + P++ S 
Sbjct: 63  EYGGAGLGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIRRNGSEAQRQRYLPRLISG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+ ++  +     D         W  + P +D
Sbjct: 123 EH-------------VGALAMSEPGAGSDVLSMKLRAVPRGDAYVLNGSKMWITNGPDAD 169

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ A+ E  +G   V   + +    G    +  +K+G R + T EL F +        
Sbjct: 170 TLVVYAKTEPELGGRGVTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPAENV 229

Query: 302 LNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L    G  + +   +  + A+++   +  M+  + E + Y   R   G  + +  +++  
Sbjct: 230 LGEVNGGAKVLMSGLDYERAVLAAGPIGIMQAVMDEVVPYVHERRQFGRSIGEFQLIQAK 289

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + A  +  + +  + D     +      R        WC + A  +  E ++ 
Sbjct: 290 LADMYTVLQAGRSFCYTIGKNLDA--LGTGHVRRVRKDCASVILWCAEKATWMAGEGIQI 347

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG+GYI +  + R +R++    I  G+     + +   L
Sbjct: 348 FGGNGYINDYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|190890618|ref|YP_001977160.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190695897|gb|ACE89982.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 591

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 94/508 (18%), Positives = 184/508 (36%), Gaps = 58/508 (11%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LG+ ++     E  R A      L       G R    +V     W  L R  I  G +
Sbjct: 30  ELGDDLVDAILSEAGRFATEEVAPLSDIGDRQGARLVDGEVRLPDGWRDLYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                ++F          + +  ++    +      + ++ +   V +  +  + + +  
Sbjct: 90  GLTAPQAFGGQALPDMLNVASLEMWNSGSMAFALAPTLTMGAIEAVHIHGSAALKETYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE   G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KMVSGEWTGT-------------MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFIT 196

Query: 237 SPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               DA      ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 WGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKLG 256

Query: 281 NRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              + T  + + +          G+L+G+ N     +  M     L   +  V+    + 
Sbjct: 257 IHGSPTCTMIYGDGRFGGEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAAT 316

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            +A+ YAR R               ++D P + R +  +      + A+S+  A++ D  
Sbjct: 317 QKALAYARERTQGRAPGSTGPGMSPIVDHPDVARMLLTMKALTQGSRAISYACAHAIDMS 376

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             A         A ++ PI K +       V +  ++  GG G+IEE   AR+ R++   
Sbjct: 377 RRAGDSRHWQERAALLTPIAKAFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIA 436

Query: 441 SILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC---- 494
            I  G+       L    L   G +        L+    +  +  +    ++ +      
Sbjct: 437 PIYEGTNGIQAIDLVTRKLPLSGGDQVMGFIGELKAIAEAVERSNLDGFGETAARLAVAI 496

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGM 522
            +      +L   +A   +A AL  A  
Sbjct: 497 ADLDAATAWLLAVLADDKAAEALAGATP 524


>gi|50552918|ref|XP_503869.1| YALI0E12573p [Yarrowia lipolytica]
 gi|49649738|emb|CAG79462.1| YALI0E12573p [Yarrowia lipolytica]
          Length = 417

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 136/359 (37%), Gaps = 24/359 (6%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L  +    G         +  + +   AH +    L   +   A    + S    + ++L
Sbjct: 76  LWEKFGEAGFLGMTAPEKYGGLNLGYLAHSVVMEELSRASGSIALSYSAHSQLCINQLSL 135

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            TTP   + + P + +                   L ++E   G+D+ ++ +  +K+  G
Sbjct: 136 HTTPEQGEKYLPDLIAG-------------KKIGALAMSEAGAGSDVVSMKTTAKKVDGG 182

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  + P +D  ++ A+ +   G   +   + +   +G    R  +K+G R +
Sbjct: 183 YVLNGTKMWITNGPDADYMVVYAKTDPAAGARGITAFIVEKGMDGFSCARKLDKLGMRGS 242

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F + F      L    G V  +     L  L  A   +  M  +L EA+ Y   
Sbjct: 243 NTGELIFEDVFVPEGNVLGKINGGVYVLMSGLDLERLVLAAGPIGLMHRALDEALPYVHT 302

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +++  +AD+    A+  A  ++ A + D  +  S+E A   ++A    
Sbjct: 303 RTQFGKPIAHNQLLQGKLADMYTAFASTRAFQYQTAKAADLGQHTSKECASVILLAA--- 359

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + A  V  +A++C+GG GY+ E    R  R++    I  G+     + +     K
Sbjct: 360 ----EQATQVALDAIQCMGGMGYMMETVPQRLLRDAKLYEIGAGTSEVRRMLIGRAFNK 414


>gi|301167939|emb|CBW27525.1| isovaleryl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 382

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 129/358 (36%), Gaps = 26/358 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
              R+    G+     D  +                +  A        ++ S+   + + 
Sbjct: 39  EAFRKMGELGVLGITADPKYGGAGMGAVAATIVMEEFGKACASSTLSYLAHSILCVNNIQ 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                +G++E   G+D   I ++ +K  D
Sbjct: 99  NNASEEQKEKYLPKLISGEH-------------IGCMGMSEPEYGSDAVGIQTKAEKKDD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++  +D   +  +         +   + +    G    +  +K+G R+
Sbjct: 146 HYLLNGTKMWITNAEYADVAYVYTRTGKER--KNLSTFIVEKGAEGFSIGKPIHKMGMRA 203

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F N        +      +  M     L  +  A +S+   +  + + + YA 
Sbjct: 204 SPTGELVFDNCKVPHSALVGNEGDSIYHMMKNLELERITIAGISLGIAQACVDQCVKYAG 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L +  ++++ IA++A +        + +A  +D+ K     AA  ++  P  
Sbjct: 264 EREQFGKSLGNYQMIQKMIAEMATETEMMRRFLYTVAKEYDDGKKGPMVAAQVKLQIP-- 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                KMA  +  +A++  GG GY  E  + R  R++  N I  G+   M++ +   L
Sbjct: 322 -----KMATKIALDAIQLHGGYGYSREFPVERMMRDNKLNEIGAGTNEVMIMIIAKEL 374


>gi|110834959|ref|YP_693818.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648070|emb|CAL17546.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 593

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 152/424 (35%), Gaps = 51/424 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +    +G      +  F      ++  +    +   A        + + 
Sbjct: 75  VTTPDGFKEAFKTFAENGWSAFSGNPEFGGQGMPKSLAVLFEEMMHSACSSFALYPALTS 134

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   V       +   + PK++S E+  T             + LTE   GTD+  + +
Sbjct: 135 GACLAVDAHACEELKSQYLPKLYSGEWSGT-------------MCLTEPHSGTDLGILRT 181

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +     DG + ++G K F++    D       ++LA++         +  FLVP+ L D 
Sbjct: 182 KAVPNDDGSFNITGTKIFITGGEHDLTGNHVHLVLAKLPDAPAGSKGISLFLVPKFLPDA 241

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+    +++K+G + +AT  + F +  G+++G+ N     +  M     L  
Sbjct: 242 DNNPGEANGVTCGSIEHKMGIKGSATCVMNFDDAKGWIIGEPNQGLACMFTMMNYERLSI 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIA 367
            +  +    VS   A+ YAR R   G               +I    ++R + ++     
Sbjct: 302 GLQGLGLGEVSYQSAVEYARERLQ-GRSATGAKNPQGPADPIIVHGDVRRMLMNMRAINE 360

Query: 368 AATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL+  +    D      +A+++ +      ++ P+ K +             +  GG
Sbjct: 361 GGRALAAYVGMQLDTSKFSEDAEAKKKAEDRVALLTPVAKAFFTDRGLDTTITGQQVFGG 420

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GYI E  + +  R+   + I  G+     LD+    ++  G    +   +  +  + ++
Sbjct: 421 HGYIREWGMEQFVRDCRISQIYEGTNGIQALDLAGRKVVRNGGKSVDAFLADAQAWVDAN 480

Query: 480 GKKV 483
               
Sbjct: 481 ADNA 484


>gi|89056385|ref|YP_511836.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865934|gb|ABD56811.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 584

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 92/468 (19%), Positives = 172/468 (36%), Gaps = 41/468 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLRRS 110
                E     V+     E  R+       L+  G   P       V   P +    R  
Sbjct: 51  ASPTFEEATPDVVQAILTEAGRICEEVIAPLNRAGDETPAALENGVVRTSPGYADGYRAI 110

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D  +  +            +   A L        +      +    +  +
Sbjct: 111 AEAGFVAISADPDYGGMGLPLTVTTAVNEMIGSACLSLELNPLMTQGQIEALEHHASDAI 170

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+ S E+  T             + LTE + G+D+ A+T++ +   DG Y +SG
Sbjct: 171 KEVYLPKLTSGEWCGT-------------MNLTEPQAGSDVGALTTKAEPQGDGTYAISG 217

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K ++S    D       ++LA++ G       +  FLVP+ + D     G  N L    
Sbjct: 218 QKIYISWGDHDMADNICHLVLARLPGAPKGTKGISLFLVPKKIPDADGNPGVANSLQVVS 277

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++KIG   + T  +++    G+L+G+ N     +  M     L  A+  +S    +  +
Sbjct: 278 IEHKIGLHGSPTCVMQYDGARGWLIGEENKGMAAMFTMMNNARLGVAVQGLSVAERAYQQ 337

Query: 335 AIHYARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-R 386
           A+ +A  R           G ++D   ++R + ++  +I +  A++  LA S D  K+  
Sbjct: 338 ALAFATDRKQGRSLIENGTGTILDHADVRRMLMEMKAEIFSVRAMALDLAVSLDLEKTGD 397

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ A+ A  + PI K +       +    ++  GG G IEE   A+  R+    +I  G+
Sbjct: 398 AQAASRAAFLTPIAKVYGTDTGVKLANMGIQIHGGMGVIEETGAAQFVRDVRVTTIYEGT 457

Query: 447 GNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
                +D++   L  G      L   +E         +   LR +   
Sbjct: 458 TGIQAMDLVGRKLMDGGAAAFALLDEVEALADPVLTPMAQALRKTTED 505


>gi|33591863|ref|NP_879507.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571506|emb|CAE44996.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381280|gb|AEE66127.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 600

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 136/569 (23%), Positives = 224/569 (39%), Gaps = 49/569 (8%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71
           +P  +  A + P    G N +  D  L  L+A               + LGE   + T  
Sbjct: 12  RPRTADAAESIPNDCRGQNFWRLDPSLRQLLALCADTEELRHFTPHFDRLGELAGN-TLD 70

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRK 130
           ELA  A+ + P L      G   D++++HPA+  + R +  + G+               
Sbjct: 71  ELADAADKHPPTLAPRDRHGRDVDRIDYHPAYREMERIAFSEFGMAAIGHKPGVLGWPGH 130

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNK 188
            +  ++    YL +Q E G L   +   A+  M+       + +  A  +          
Sbjct: 131 ASPLVKYTLTYLFSQAEFGLLCPVNGNDAAVGMIQRYADDTLKQRMAGML---------- 180

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           +   +T + IG  +TE+ GG+D+A I +  +      + + G KWF S+  +D  ++LA+
Sbjct: 181 SQDMRTLLKIGHFMTERTGGSDLAGIGTHARFDG-SAWKIYGEKWFYSAIDADYVLVLAR 239

Query: 249 VEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            EG       +G F+VPRLLEDG+ N     RLKNK+G RS AT E+ F       +G  
Sbjct: 240 PEGAPAGTRGLGMFVVPRLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQG 299

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                          L   + +   MR  L E++H+ARRR   G  +I  P+MKR++  I
Sbjct: 300 RDGIRYAVLPINASRLSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKI 359

Query: 363 ALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            +    A +    +A++          +    R+   + K+  C+    V   AME  GG
Sbjct: 360 MVPTEQALSACMFVASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGG 419

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG- 480
           SGYIEE   AR  R++    +  G+ N   LD++          E L   L +    +  
Sbjct: 420 SGYIEEWINARLVRDAQTGLLWEGTSNINALDIVTRAVARDAAHEALRQRLMELARDARV 479

Query: 481 -KKVITILRDSISLC----------KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
             +    L  ++              + + LAR  + ++    +A  L   G        
Sbjct: 480 PPRHGAALTQAVEEAVARIAAIAADPQLEHLARSASSRLYHVMTAVLLAHEG------AM 533

Query: 530 LENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           L  R  D       +L       H I+  
Sbjct: 534 LAARTGDARR----LLLSWMVLMHRIEHA 558


>gi|325914364|ref|ZP_08176711.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539372|gb|EGD11021.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 387

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 147/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFASHHIAPL----AAAADQDNV--FPA--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  +        AH +    +            + S    + +    +    + + PK+
Sbjct: 60  VEEEYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASEEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CTGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRFVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|256059341|ref|ZP_05449543.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
          Length = 333

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 126/354 (35%), Gaps = 30/354 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRV 170
             G    +    +            A             ++S   +   M  L   T   
Sbjct: 3   ALGFLGMLVPEEWGGSDLGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQ 62

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+   E+               G  LTE + G+D +A+ ++ +   D       
Sbjct: 63  KRRFLPKMACGEW-------------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGS 109

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  S   S+  I+ A  +   G   +   +      G     +++K+G  S+ T  L 
Sbjct: 110 KQFITSGKNSNVAIVFAVTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALG 169

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           F+N    +    N      E  KI +       +  A  +V   R +   A  YAR R  
Sbjct: 170 FTNMRVPV---ENRLGAEGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERIT 226

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +I+   +   +AD+A  I  A  +    A   +  K    EA+ A+++A       
Sbjct: 227 FGKPIIEHQAVAFRLADMATRIETARQMVLHAAALREAGKPCLTEASMAKLVA------- 279

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +MA  V + A++  GG GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 280 SEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 333


>gi|108798036|ref|YP_638233.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867131|ref|YP_937083.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768455|gb|ABG07177.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693220|gb|ABL90293.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 388

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 145/399 (36%), Gaps = 39/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E V++ TA   A              P    WD+    P    +LR +   G+       
Sbjct: 10  ERVIAETAAAFAE---------KRLAPYASEWDESHHFPT--DVLREAAELGMAAIYCRE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R       A       +S     A MV    +    K W P++ S E
Sbjct: 59  DVGGSGLRRVDAVRIFEQLSAADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D +A+ ++  +  D    L G K F+S    SD
Sbjct: 119 -------------SIASYCLTEPGAGSDASALRTKAVREGDHF-VLDGVKQFISGAGSSD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   + +    G+ +   + K+G  +  T ++ F          
Sbjct: 165 VYVVMART-GSDGPRGISAFVVEKDTPGVSFGAQEQKMGWNAQPTAQVVFEGARVPAENM 223

Query: 302 LNV------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L          G   +      L+ A  S+ G + +  +A  Y   R   G  L+D+P +
Sbjct: 224 LGGTDAEGSGFGIAMNGLNGGRLNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTI 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  +  +  L +R A + DE      E      +  + K +       V  +A
Sbjct: 284 RFTLADMATALQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++  GG GY+ E  I +  R+   + IL GS   M + +
Sbjct: 338 LQLHGGYGYLREYGIEKIVRDLRVHRILEGSNEIMRVVI 376


>gi|78061564|ref|YP_371472.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77969449|gb|ABB10828.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 377

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 142/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P    ++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EMLAPSSAQWDHDAHLPD--EIVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  ++ S       
Sbjct: 64  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAEMASG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
                   V     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 118 -------RVIGAFCLTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|321466669|gb|EFX77663.1| hypothetical protein DAPPUDRAFT_53968 [Daphnia pulex]
          Length = 394

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK+          ++    GL        +         H I    +   +   
Sbjct: 34  PKANDIDKMNTFTEMREFYKKCGALGLLGITAKSEYGGSDGGYLDHCIIMEEISRASGAI 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + ++   T      + PK+ S ++                L ++E   
Sbjct: 94  GLSYGAHSNLCINQISRNGTEEQKHKYLPKLCSGDHMG-------------ALAMSEPGS 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLED 264
           G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+           +   L +
Sbjct: 141 GSDVVSMKLKAEKKGD-YYVLNGNKFWITNGPDADVLIIYAKTGAADSKPQHGITAFLVE 199

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G    +  +K+G R + T EL F +        LG LN     +        L  A
Sbjct: 200 KDFPGFRTAQKLDKLGMRGSNTCELIFEDCKVPEANILGKLNRGVYVLMSGLESERLVLA 259

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V  M+     A  YA  R   G  + +  +++  +AD+   ++A  +  + +A + D
Sbjct: 260 SGPVGIMQACCDTAFDYAHIRKQFGKRIGEFQLIQGKMADMYTTLSACRSYLYNVARACD 319

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              + +++             +  + A  +  +A++ +GG+GYI +    R+ R++    
Sbjct: 320 RGHASNKD-------CAGVILYTAEKATLMALDAIQILGGNGYINDYPTGRYLRDAKLYE 372

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+       +   L +
Sbjct: 373 IGAGTSEVRRSIIGRSLNE 391


>gi|325967554|ref|YP_004243746.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
 gi|323706757|gb|ADY00244.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
          Length = 555

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 118/495 (23%), Positives = 212/495 (42%), Gaps = 46/495 (9%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G+N Y +D  L  ++  F   +   L  LG +      +    +   + P+   +   G 
Sbjct: 20  GINMYDADKPLQRILQYFTGKI-PSLSELGIFAGRDLLEITDYVDKISKPKHIMWDVNGN 78

Query: 93  RWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R D+V  +PA   A+ +  +  G++        +P     +     A  YL++      +
Sbjct: 79  RVDRVWLNPAERYAIEKLVLDFGIN--------KPPYHGGSWHEHYAMGYLISDPGLYCI 130

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +  +A  +       + + + PK+   +          K         TE +GG+D+
Sbjct: 131 ITITNQTAYALHKYGNEELKR-YVPKLIGDD----------KPINFGATWFTEIQGGSDL 179

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV------GCFLVPRLLED 264
            A T+  +    G + L G K+F S   ++D  +  A+ EG          F VPRL   
Sbjct: 180 GANTTVAKVDG-GKWRLYGDKYFASGVGLADIALTSARPEGGKPGAKGLALFAVPRLDSS 238

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+ N    +RLK+K G  S  T E+EF  +  +L+GD +     + +  ++  L +AI +
Sbjct: 239 GNLN-FMVRRLKDKSGTNSVPTGEVEFHGSEAYLVGDQSNGIYYIMEDLMVSRLANAIGA 297

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
           V   R +  EA  YA RR   G +LI+ P++ R + D+ + +  ATAL F+  + FD   
Sbjct: 298 VGVARKAYLEAYEYASRRRAFGKLLIEHPLVIRDLMDMEVALEGATALVFKAVDEFDRSW 357

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +     +   YAR++  I K      A  +   AME  GG G++ E  I R +RE+   
Sbjct: 358 HDKPPYGDRYHYARLLTHIAKNVTADAAAYITRLAMELYGGIGFLSEYPIERWHREALIT 417

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS------SGKKVITILRDSISLC 494
            I  G+ N   LD+L  + K  N    + S +E  + S        +  +  +R+++ + 
Sbjct: 418 PIWEGTSNIQALDMLEAMNK-KNAHITMLSEMENTVASIKSYHEIAEAAMNAMRNTMQVI 476

Query: 495 K-----EDKGLARFL 504
                 E +  A+ +
Sbjct: 477 SSLSSLEIEFRAKDI 491


>gi|296168603|ref|ZP_06850407.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896666|gb|EFG76305.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 144/380 (37%), Gaps = 32/380 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR S   G+              ++   +R       A
Sbjct: 21  KRIAPHSLEWDAAKHFPT--DVLRESAELGMAAIYCREDVGGSGLRRLDGVRIFEQLATA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T    K+W P++                 V     LTE
Sbjct: 79  CPTIAAFLSIHNMCAWMIDTFGTAEQRKEWVPRLAGM-------------DVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
              G+D +A++++  +   G    Y L+G K F+S   + DA++++A+  G  G   +  
Sbjct: 126 PGAGSDASALSTRAVREGPGKNADYVLTGVKQFISGAGASDAYVVMART-GGDGPRGISA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G  +  T ++            L  + G      I +    
Sbjct: 185 FVVEKGSAGLSFGAPEEKMGWHAQPTAQVILDGVRVPAEAMLGGADGEGAGFGIAMNGLN 244

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A  Y R R   G  L+D+P ++  +AD+A  +  +  + +
Sbjct: 245 GGRLNIAACSLGGAQSAFDKAGAYVREREAFGKPLLDEPTVRFTLADMATGLETSRMMLW 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D       E      +  + K +       V  +A++  GG GY+ E  + +  
Sbjct: 305 RAADALDNDDPDKVE------LCAMGKRYVTDTCFDVADKALQLHGGYGYLREYGLEKIV 358

Query: 435 RESPANSILLGSGNAMVLDV 454
           R+   + IL G+   M + +
Sbjct: 359 RDLRVHRILEGTNEIMRVVI 378


>gi|126667234|ref|ZP_01738208.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628390|gb|EAZ99013.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 142/379 (37%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    +LR++   G        +F  +   +            A    
Sbjct: 26  PFAAHWDEESIFP--KDVLRQAGEMGFCGLYTPEAFGGMGLSRQDTAVIVEELAAACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +  M+A   T  V ++  P + S E                   LTE   G
Sbjct: 84  AAFITIHNMATWMLASFGTDEVRQNVVPTLASGE-------------KLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           +D A++ ++ ++  D  Y ++G K F+S   + D  I++A+      G   +   L    
Sbjct: 131 SDAASLRTKAERDGDD-YVINGSKVFISGAGATDVLILMARTGSPDSGAKGISAFLIPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G+ Y + + K+G  S  T  +   N    +   L     G    MK L    L+ A  
Sbjct: 190 ADGVSYGKNEKKMGWHSQPTRSVTLENVRVPVTNRLGAEGEGFAIAMKGLDGGRLNIATC 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +L  A  Y   R   G  L     ++  +AD+A ++ AA  +    A   D  
Sbjct: 250 SLGGAQAALLRARDYMHARAQFGKPLAAFQALQFKLADMATNLVAARQMVRLGAFKLDNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A +   + K +   +   V+ +A++  GG GYI E  + R+ R+   + IL
Sbjct: 310 DPE------ATLHCAMAKRFATDVCFDVVNDALQLHGGYGYIREYPLERYLRDLRVHQIL 363

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            G+   M L V   + +  
Sbjct: 364 EGTNEVMRLIVARRILEQG 382


>gi|73995317|ref|XP_534712.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short-chain specific,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Canis familiaris]
          Length = 404

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 142/375 (37%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   A +++    GL        F            A           
Sbjct: 47  PIAAQVDKEHRFP--KAQVKKMGELGLLAMDVPEEFSGAGLDYLAYAIAMEEISRGCAST 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +      L            K  S+E       P           L+E   G
Sbjct: 105 GVIMSVNNSLYLGPIL------------KFGSKEQKQQWITPFTSGDKIGCFALSEPGNG 152

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  Q   D         W  +S  + A ++ A  +  +    +   L     +
Sbjct: 153 SDAGAASTTAQADGDAWILNGTKAWITNSWEASAAVVFASTDRSLQNKGISAFLVPMPTS 212

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL   + ++K+G R+++T  L F +       LLG+  +          +  +  A  ++
Sbjct: 213 GLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGEPGMGFKIAMQTLDMGRIGIAAQAL 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A++YA  R   G  L     ++  +AD+AL + +A  L++R A   D+ + 
Sbjct: 273 GIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMALALESARLLTWRAAMLKDKKQP 332

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    I  G
Sbjct: 333 FTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEG 385

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L K
Sbjct: 386 TSEIQRLVIAGHLLK 400


>gi|325920897|ref|ZP_08182792.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325548649|gb|EGD19608.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 387

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 148/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ALGEEI-DLLRESVAAFASHHIAPL----AAAADQDNV--FPA--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  +        AH +    +            + S    + +    TP   + + PK+
Sbjct: 60  VEEDYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNATPEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CTGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRFVLNGNKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPAAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGQTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|148558627|ref|YP_001257429.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|148369912|gb|ABQ62784.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
          Length = 375

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSIIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|126725190|ref|ZP_01741033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126706354|gb|EBA05444.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 592

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/539 (19%), Positives = 192/539 (35%), Gaps = 78/539 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
             L     S   +E  ++A+     L+A     G  ++   V     +     +    G 
Sbjct: 30  AELDRDFTSAILEEAGKVASEVLAPLNAVGDQEGCSFENGVVRTPTGFKEAFDQIREAGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +               +++ A +        +  + S +    +      + 
Sbjct: 90  TGLDCDPEYGGQGLPYLMGSSVGEMFVSANMAFNMYQGLTHGAYSAIHAHGSDDQKAMFL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S ++  T             + LTE   GTD+  + ++     DG + +SG K F+
Sbjct: 150 PKMVSCDWTGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSFKISGQKIFI 196

Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++ G       V  F+VP+   D     G+ NG    +++ K+
Sbjct: 197 SAGEHDLADNIIHLLLAKIPGGPDGIKGVSLFIVPKFNVDEDGNLGARNGAFAGKIEEKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + +    G+LLG+ +     +  M     L  A+   +   V+   A+ YA
Sbjct: 257 GIHGNSTCVMNYDEATGYLLGEEHKGMRAMFTMMNEARLGVALQGFAQAEVAYQNAVVYA 316

Query: 340 RRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R   G               LI  P ++R + D    +  A A ++  AN  D +   
Sbjct: 317 NDRLQ-GRDVTGTKNPEGPADPLIVHPDIRRNLMDQKSFVEGARAFAYWAANLIDRSNRM 375

Query: 387 SEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++ A     ++ P+ K +           A +  GG GYIEE  +++  R++    I  
Sbjct: 376 DDKEAHGLVSLVTPVLKGFLTDKGFENTIAAQQIYGGHGYIEESGMSQFARDARIAMIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           G+     LD++                L QD G        +++D I   ++D+ L    
Sbjct: 436 GANGVQALDLVG-------------RKLGQDGGKHVMAFFALVKDFIKENEKDEILQNGF 482

Query: 505 TEKIALA---SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            E +  A      A++Y          FLEN         +  L G ++  H    + L
Sbjct: 483 LEPLKNASKDLQTASMY----------FLEN----AAKKPNNALAGSYDFMHAFGHVCL 527


>gi|195395796|ref|XP_002056520.1| GJ10995 [Drosophila virilis]
 gi|194143229|gb|EDW59632.1| GJ10995 [Drosophila virilis]
          Length = 406

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 141/380 (37%), Gaps = 32/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G    ++D+   +PA    +R+    GL                     A          
Sbjct: 48  GQNAAKFDREHLYPA--KQIRQMGELGLMAVAVPEELGGTGLDYLAYAIAMEEISRGCAS 105

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG +MS + +      L          +     + E                   L+E  
Sbjct: 106 AGVIMSVNNSLYLGPLLSYANAAQKAAYITPYTTGE-------------RVGCFALSEPG 152

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A ++   +  D         W  ++  ++A ++ A    ++    +   +    
Sbjct: 153 NGSDAGAASTVATEKGDHYVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGISAFIVPKG 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G R ++T +L F +     +   ++        KI +  LD+  + +
Sbjct: 213 IKGFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKESLLGETGFGFKIAMQTLDAGRIGI 269

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A+     A+ YA++R   G  +     +++ IAD++L + +A  L++R A   
Sbjct: 270 ASQALGIAQASLELAVDYAQKRQAFGKPISKLQAIQQKIADMSLAVESARLLTWRAAWLK 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++   
Sbjct: 330 DNKLPYTKEAAMAKLAASEAATLC-------AHQCIQVLGGMGYVTDMAAERHYRDARIT 382

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L V   + K
Sbjct: 383 EIYEGTSEIQRLVVAGSILK 402


>gi|23500196|ref|NP_699636.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|23463798|gb|AAN33641.1| acyl-CoA dehydrogenase [Brucella suis 1330]
          Length = 375

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 139/397 (35%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +  R A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLRAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|304312544|ref|YP_003812142.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798277|emb|CBL46499.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 599

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 82/471 (17%), Positives = 165/471 (35%), Gaps = 57/471 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    +E AR +      L       G  ++   V     +    ++ + +G     
Sbjct: 36  RELIDAIIEEGARFSENELAPLCRSGDEEGCHFENGVVTTPKGFKEAYKKYVENGWGAMT 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
             R         +     + +   A          S  +   +    TP   + +  K+ 
Sbjct: 96  AHREQGGQGLPASMGTVVSEMNGTANWSWAMYPGLSHGAIRTIEAHGTPEQKELFLTKLI 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+  
Sbjct: 156 SGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNADGSYNITGTKIFISAGD 202

Query: 240 SD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRS 283
            D       I+LA+  +   G   +   +            G  NG+    +++K+G ++
Sbjct: 203 HDMADNIVHIVLARLPDAPKGTKGISLFIVPKNHVNADGSIGDRNGVVCGSIEHKMGIKA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  L F    GFL+G  N     +        + +A+  ++   +S   A+ YA+ R 
Sbjct: 263 SATCVLNFEGARGFLIGPPNRGLNCMFTFMNTARVGTAVQGIAAAELSFQGALTYAKDRL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
                            +I  P ++R +           AL + LA   D      +  S
Sbjct: 323 AMRSLSGPKFPEKEADPIIVHPDVRRMLLTQKAFAEGGRALIYFLAQQIDLVEEGADETS 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R         + PI K +C +         ++  GG G+I E  + +  R++   ++  G
Sbjct: 383 RQAADDLMAFLTPIAKAFCTETGLESANHGVQVYGGHGFIREWGMEQIVRDTRIATLYEG 442

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFST-----LEQDLGSSGKKVITILRD 489
           +     +D+L   ++     L +          +E +  ++ K+ I  L  
Sbjct: 443 TTGVQAIDLLGRKVMLTQGRLLKNFSKIVHKFCVENEADAALKEFIEPLAA 493


>gi|192290931|ref|YP_001991536.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284680|gb|ACF01061.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 375

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 125/349 (35%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK 172
           G    +   ++            A             ++S   +   M  L   T    +
Sbjct: 47  GFLGMLVPEAYGGSETGMVAYTLALEEIAAGDGACSTIVSVHSSVGCMPILKFGTDEQKQ 106

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+               G  LTE + G+D + + +  ++  D        +
Sbjct: 107 RFLPKLASGEW-------------IGGFALTEPQAGSDASNLRTTARRDGDHYVINGAKQ 153

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  S       I+ A  +   G   +   +      G    R+++K+G  S+ T +L F+
Sbjct: 154 FITSGQNGQLIILFAVTDPSAGKKGITAFIVPTDTPGYEVVRVEDKLGQHSSDTCQLAFN 213

Query: 293 NTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +        LG                 +  A  +V   R +   A  YAR R   G  +
Sbjct: 214 DMRIPADLRLGAEGEGLKIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+   +   +AD+A  IAAA  +    A+  +       EA+ A       K +  + A 
Sbjct: 274 IEHQAVAFRLADMATRIAAARQMVLHAASLREAGLPCLTEASMA-------KLFASETAE 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           AV + A++ +GG GY+++  + R YR+     I  G+ +   + +   L
Sbjct: 327 AVCSSAIQTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRIVIARNL 375


>gi|241763455|ref|ZP_04761509.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367397|gb|EER61718.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 598

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 86/457 (18%), Positives = 160/457 (35%), Gaps = 68/457 (14%)

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G + D    +V     +     + +  G      D ++          +      +M
Sbjct: 62  DTEGCKLDKSTHEVTTPQGFKEAYAKYVEGGWAALSCDPAYGGQGLP--FVVNQCFYEMM 119

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +   L    T    K + PK+ S E+  T             + 
Sbjct: 120 NSANQAWTMYPGLSHGAYECLHAHGTEEQKKIYLPKLTSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA++       
Sbjct: 167 LTEPHCGTDLGLLRTKAEPQADGTYKITGAKIFISAGEHDMTSNIVHLVLARLPDAPVGS 226

Query: 252 -RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+   +     G  N +    L++K+G   NAT ++      G ++G  N  
Sbjct: 227 KGISLFVVPKFKVNADGSLGERNAIYCGGLEHKMGIHGNATAQIVIDGATGTMVGQPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  M     L     S+    V+   A+ YA+ R                  +I  P
Sbjct: 287 LAAMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGTKAKDKPADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            +++ +           AL    A   D      + K R E      ++ PI K +    
Sbjct: 347 DVRKMLLTAKAYAEGGRALQCFCALLLDKELSHPDEKVRKESGEMLALLTPIVKAFITDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                    +  GG GYI+E  + ++ R++  N I  G+     LD+L     G N    
Sbjct: 407 GYEAATMCQQVFGGHGYIKEWGMEQYVRDARINMIYEGTNTIQSLDLLGRKILGNN---- 462

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                    G++ KK   ++   +     ++ +A F+
Sbjct: 463 ---------GATLKKFGKLVGQLVEEEGVNEKMAEFI 490


>gi|117921210|ref|YP_870402.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613542|gb|ABK48996.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 385

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 76/394 (19%), Positives = 141/394 (35%), Gaps = 27/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A +A           P   +WD+    P    +++++   G        S   +
Sbjct: 7   EDQRQFADLARQFAA--DELAPFAAKWDEEHHFP--KDVIQKAGELGFCSLYSPESEGGM 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                   +++    +  MV    T  + + W+            
Sbjct: 63  GLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTDTLRQAWSE----------- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+    +     LTE   G+D A++ ++  +  D  Y +SG K F+S   S   +++ 
Sbjct: 112 --PLTTGQMLASYCLTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G+ G   +  +       G+ Y + ++K+G  +  T  + F N    +   L     
Sbjct: 169 CRTGQAGPKGISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  A  Y   R   G  L     ++  +AD+A 
Sbjct: 229 GFTFAMKGLDGGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D           A     + K +   +   V   A++  GG GY
Sbjct: 289 ELVAARQMVRLAAFKLDSGDPE------ATAYCAMAKRFATDVGFQVCDAALQIHGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  + RH+R+   + IL G+   M L +   L
Sbjct: 343 IREYPLERHFRDVRVHQILEGTNEIMRLIIARRL 376


>gi|313205892|ref|YP_004045069.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445208|gb|ADQ81563.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022204|gb|EFT35232.1| Acyl-CoA dehydrogenase, short-chain specific [Riemerella
           anatipestifer RA-YM]
 gi|325336668|gb|ADZ12942.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 376

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 134/375 (35%), Gaps = 32/375 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L  +    G    +    +         +      +  +       +
Sbjct: 27  EWDESQTFPV--ELFHQLGEMGFMGIVIPEEYGGSGLSYHEYVAILDEISQVDPSIGLSV 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +         K W PK+ S               V    GLTE   G+D 
Sbjct: 85  AAHNSLCTNHIYEFGNEEQRKKWLPKLASG-------------QVIGAWGLTEHNTGSDA 131

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             + +   K  D         +   +   D  +++ +   +         + +    G  
Sbjct: 132 GGMNTTAVKDGDEWVINGAKNFITHAISGDIAVVMTRTGEKNTSNNATAFVLEKGMPGFS 191

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRV 330
             + +NK+G R++ T EL F N        L  V  G  + +KI   LD   +S++ + +
Sbjct: 192 SGKKENKLGMRASETAELIFDNVRVPDSHRLGQVGEGFKQALKI---LDGGRISIAALSL 248

Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A      A+ YA+ RH  G  + +   +   +AD+A +I AA  L  R A   +  + 
Sbjct: 249 GIAKGAYKAALKYAKERHQFGQAIANFQAINFMLADMATEIDAAELLIQRAATLKNAKQK 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E A A       K +  +    +   A++  GG GY ++    ++YR+S   +I  G
Sbjct: 309 MTREGAMA-------KLYASEACVRISNNALQIFGGYGYTKDFPAEKYYRDSKLCTIGEG 361

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   + K
Sbjct: 362 TSEIQKLVIGRDIIK 376


>gi|255525452|ref|ZP_05392389.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
 gi|255510817|gb|EET87120.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans
           P7]
          Length = 379

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 131/364 (35%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + ++    GL    +   +        A+ I    +                  AS + 
Sbjct: 40  EVFKKMADIGLVALPFSSEYGGADGDYLAYVIAVEEISKACAALGISYSVDVSLCASPIY 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  +    K + P + S                    GLTE   GTD++   +      D
Sbjct: 100 MFASEGQKKKYLPDLLSG-------------KKIGAFGLTEANAGTDVSGGQATAVLDGD 146

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F ++  ++D  ++ A  +   G   +   + +    G    +L++K+G R
Sbjct: 147 -YYILNGEKKFTTNGPIADTLMVFALTDKTKGSKGMSAFIVEKDFPGFSIGKLEDKMGIR 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAI 336
           +    E  + N         N+     E  KI +  LD   + V+   + +A     E I
Sbjct: 206 AAQVSETLYKNCRVP---KENLVGKEGEGFKIAMKALDCGRIGVAAQGLGIAEGALEETI 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  +     +   +AD+ + I  A  L ++ A   D     S  AA A++ 
Sbjct: 263 KYVKVRKQFGKEIYKFQGLAWMMADMDMKIEQARNLVYKAAWEKDNGIPYSVSAARAKLA 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A          A  V  EA++ +GG GY+++  + R  R++    I  G+     + +  
Sbjct: 323 A-------TDAAMYVTTEAVQILGGYGYMKDYPLERMMRDAKITQIYEGTNQVQKMVISG 375

Query: 457 LLEK 460
            + K
Sbjct: 376 AMFK 379


>gi|295697021|ref|YP_003590259.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295412623|gb|ADG07115.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 381

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 147/376 (39%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQL 146
           P  E W++ E  P    +LR+    G         +         +         L A  
Sbjct: 25  PHVEEWERAEQVP--RTVLRKMGELGYFGLNIAEEYGGGGENPLAEAVLHEELGRLNASG 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            AG +      +   V    T    + +               P  +      L +TE  
Sbjct: 83  FAGTVGVHIGIAMRPVYRFGTEEQKQAYV-------------VPGVQGEKIGALAITEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+AAI ++  +  DG Y LSG+K F+++ + +D +++ A+     G   V   + D 
Sbjct: 130 AGSDVAAIRTKAVREGDG-YVLSGNKIFITNGVYADFYVVAAKTNPEAGHRGVSLFIVDR 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G   QR   K+G+ ++ T EL F +       LLG+ N     V        L  A+
Sbjct: 189 DAPGFHVQRKLEKVGHHASDTAELFFDDCRIPADRLLGEENRGFYLVMQNFQWERLMIAL 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L  A+ YA+ R   GG L    V++  + D+A+++  A  L++   + +  
Sbjct: 249 QTLGTAQAALDMAVEYAKTRQQFGGPLTQFQVIRHRLVDMAVEVEKARQLTYHALDLYAR 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E + A++ A        + A  V  EA++  GG GY+ E  I R +R+     I
Sbjct: 309 GIDAVAETSMAKLTA-------TETACKVADEALQIHGGYGYMNEYPIQRAWRDMRVTRI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 362 YGGTSEIMKEIIAKRM 377


>gi|183983130|ref|YP_001851421.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183176456|gb|ACC41566.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 381

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 138/411 (33%), Gaps = 40/411 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             +  EL  L +      + ELA  A     Q         + D+         L  ++ 
Sbjct: 7   PWMSAELLELRDLAAKFFSTELAPHAQRFADQ--------HQVDR--------ELWHKAG 50

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +       + 
Sbjct: 51  ELGLLCMSIPEEYGGGGGTFAHEAVVLEEQARVGDSSWGAGLHSGIVAHYILQYAAEELR 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E                 + +TE   G+D+ ++ ++     D        
Sbjct: 111 RQWLPKMASGEM-------------IGAIAMTEPGTGSDLQSVKTKAILDGDEYVITGAK 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  I++A+ +   G   +  ++ +    G    ++ +KIG R   T EL F
Sbjct: 158 TFITNGQQADLIIVVAKTDPSQGAAGISLIVAEADRPGFRRGKVLDKIGQRGQDTSELFF 217

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            +        L      G ++ M  L    L  A+ +V+ M +++ + + Y R R   G 
Sbjct: 218 DDVRVPRSHLLGETEGQGFIQLMTQLPQERLIVAVGAVAAMELAVEQTLKYTREREAFGR 277

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      K  +A+ A +   A        +     +   +  A A+        W  + 
Sbjct: 278 PVFGFQNTKFILAEAATETRIARVFLDYCIDLHLAGQLDVQTVAMAKW-------WTTER 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V+ + ++  GG GY+ E  I+R + +     I  G+   M   +   L
Sbjct: 331 AMKVLDDCLQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVMKEIISRSL 381


>gi|94309048|ref|YP_582258.1| isovaleryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93352900|gb|ABF06989.1| isovaleryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 393

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 139/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R +  N  Q     P     D+ +  P      R+    G+        +   
Sbjct: 12  GEDIEMLRESVRNWAQAE-LAPRAAEIDRTDQFPM--DAWRKMGDLGVLGITVAEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 69  NMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKAKYLPKLVSGEW--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +     D         W  + P  D  ++ 
Sbjct: 126 ----------IGALAMSEPNAGSDVVSMKLRADFKGDRYVLNGTKMWITNGPDCDVLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   +   + +    G    +  +K+G R + T EL F +    +   L    
Sbjct: 176 AKTEPDLGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPVENILGAEN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A++S   V  M+  +     Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGAKVLMSGLDYERAVLSGGPVGIMQACMDVITPYIHDRKQFGQSIGEFQLIQGKVADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA +  + +  + D     ++     R        +  + A  +  E+++ +GG+G
Sbjct: 296 TTLQAARSYLYTVGKNLDS--LGTDHVRQVRKDCAAVILYTAEKATWMAGESVQILGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|148257879|ref|YP_001242464.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410052|gb|ABQ38558.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 390

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 143/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     +  +      P     D+    P    L  +    GLH    +  +  
Sbjct: 12  DLGETADAIRDTVAGFSQNEIAPRAAEIDRSNQFP--RDLWPKIGELGLHGITVEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         + + PK+ S E+  
Sbjct: 70  AGLGYLEHCIAMEEISRASASVGLSYGAHSNLCVNQIRRNGNEAQKRKYLPKLISGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E + G+D+ ++ ++  K  D         W  + P+++  ++
Sbjct: 128 -----------VGSLAMSEPQAGSDVVSMKTRADKRGDRFVLNGSKMWITNGPVAETLVV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ + + G   +   + +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDPQGGPRGITAFIIEKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEENVLGQV 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   +  M+  +   + Y   R   G  +    +++  +AD+
Sbjct: 237 GRGVNVLMSGLDYERAVLAAGPLGIMQACMDVVLPYVHERKQFGQPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+
Sbjct: 297 YTTMNAARAYVYAVAKACDRGETTREDAAGA-------ILFAAEKATQCALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 350 GYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|327188068|gb|EGE55295.1| putative acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 591

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 98/532 (18%), Positives = 183/532 (34%), Gaps = 77/532 (14%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LG+ ++     E  R A      L       G R    +V     W  L R  I  G +
Sbjct: 30  ELGDDLVDAILSEAGRFATEEVAPLSDIGDRQGARLVDGEVRLPDGWRDLYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                ++F          + A  ++    +      + ++ +   V    +  + + +  
Sbjct: 90  GLTAPQAFGGQALPDMLNVAALEMWNSGSMAFALAPTLTMGAIEAVHTHGSAALKETYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE   G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KMVSGEWTGT-------------MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFIT 196

Query: 237 SPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               DA      ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 WGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKLG 256

Query: 281 NRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              + T  + + +          G+L+G+ N     +  M     L   +  V+    + 
Sbjct: 257 IHGSPTCTMIYGDGRFGGEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAAT 316

Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            +A+ YAR R               ++D P + R +  +      A A+S+  A++ D  
Sbjct: 317 QKALAYARERTQGRAPGSTGPGMSPIVDHPDVARMLLTMRALTQGARAISYACAHAIDMS 376

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             A  R      A ++ PI K +       V +  ++  GG G+IEE   AR+ R++   
Sbjct: 377 RRAGDRRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGIGFIEETGAARYLRDARIA 436

Query: 441 SILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE---------------------QDLG 477
            I  G+       L    L   G +        L+                         
Sbjct: 437 PIYEGTNGIQAIDLVTRKLPLSGGDQVMGFIGELKAIAEAVERSNFDGFGETAARLAVAI 496

Query: 478 SSGKKVITILRDSISLCKEDKGLARF--LTEKIALASSAAALYRAGMNDIAD 527
           +        L   ++  K  + LA          L  +   L +  + +  D
Sbjct: 497 ADLDAATAWLLAVLADDKAAEALAGATPYQRLFGLVLTGCYLAKGALAESGD 548


>gi|319950404|ref|ZP_08024320.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319435920|gb|EFV91124.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 387

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 144/383 (37%), Gaps = 32/383 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP  + WD+    P    +LR +   G+              ++   +R        
Sbjct: 21  KRVGPMAQEWDETHHFP--KDVLREAAGMGMGAIYVSEDVGGSGMRRLDGVRIFEQLARG 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       MV    T    ++W P++ S E             +     LTE
Sbjct: 79  CPSVAAYLSIHNMCVWMVDEFGTDEQRQEWIPRLASME-------------LFASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D  Y L+G K F+S    SD ++++A+  G  G   +   L 
Sbjct: 126 PGAGSDAAALRTKAVRDGDH-YVLTGTKQFISGGGQSDVYLVMART-GDAGPKGISAFLV 183

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL--------GDLNVSTGPVEDMKIL 315
                GL +   + K+G  +  T ++                  G   +           
Sbjct: 184 PADSEGLSFGADERKMGWNAQPTAQVIMEGVRVPAANLIGGADSGGEGLGFTIAMRGLNG 243

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S+ G + + A A+ + R R   GG LID+P ++  +A++A ++ A+  + +R
Sbjct: 244 GRINIAACSLGGAQEAYARAVAHVRDREAFGGALIDEPTIRFTLAELATELEASRLMLWR 303

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D  +    E      +  + K +       +   +++  GG GY+ E  I +  R
Sbjct: 304 AAAALDAKEPDHVE------LCAMAKLFVTDRCFDIADRSLQLFGGYGYLSEYGIEKIVR 357

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           +   + IL G+   M + V   +
Sbjct: 358 DLRVHRILEGTNEIMRVVVGRAV 380


>gi|309791007|ref|ZP_07685547.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308226980|gb|EFO80668.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 379

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 133/377 (35%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           P     D+   H  W   L+++    GL        +        ++ I    L  +   
Sbjct: 26  PTAAERDE---HAIWPTDLVQKMGELGLLGVAVREEYGGAGLDYISYAIVIEELSRVDPS 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +      +    T +  K+    + S               +     L+E  
Sbjct: 83  LGVIASVNNSLVCYGIEKFGTEQQKKELLTPLASG-------------KMLGAFSLSEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D AA  +   +  D         W  +   +D  I++A  +   G   +   L D  
Sbjct: 130 AGSDAAAQKTTAVRDGDHYVINGVKNWVTNGDHADTIILMAMTDPSKGVKGISAFLVDTK 189

Query: 267 PNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +++NK+G RS  + ++   EF      LLG+          +     +  A  
Sbjct: 190 EPGCRVVKVENKLGIRSAHSSQMAYDEFRVPAWRLLGEEGQGFKIAMTILNAGRIGIAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +  EA+ Y + R   G  + +   +  A+AD+A  I AA  L++  A   D+ 
Sbjct: 250 ALGIAQGAYEEALAYTKVREQFGKPIHEFQAVGFALADMATRIKAARLLTYDAAWRKDQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++AA A       K +  + A     +A++  G +GY +E  I R +R++    I 
Sbjct: 310 LDYGKDAAMA-------KVFASETAMWTATKALQLHGSNGYSKEYPIERFFRDAKITEIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   + K
Sbjct: 363 EGTSEIQRLVISREITK 379


>gi|120405539|ref|YP_955368.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958357|gb|ABM15362.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 134/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W+         +    +   GL        +      +  +  A     MA+   
Sbjct: 27  PNSEKWETERIVD--RSAYTAAGKYGLIGFNMPEEYGG-GGSEDFRFNAIIDEEMAKSGV 83

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L   +         +T     K W P I S E               I + +TE  
Sbjct: 84  HGPALSLHNDVVGPYFKDLTNDEQKKRWLPGIASGE-------------TIIAVAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+A I +   +  D  + ++G K F+SS +  D  +++A+ +   G       + + 
Sbjct: 131 AGSDLAGIRTSAVRDGDD-WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVER 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G  S  T EL F N       LLG        +        L  AI
Sbjct: 190 GMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSIAI 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +++G R    E + YA+ R   G  +      +  +A++  ++        R      +
Sbjct: 250 SAIAGARAVFQETLQYAKDRKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVD 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EAA A+        W  + A  V+ + ++  GG GY+ E  +AR Y +    +I
Sbjct: 310 GELTAVEAAKAKW-------WATETAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTI 362

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 363 FGGTTEIMKEIIGREL 378


>gi|316934920|ref|YP_004109902.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602634|gb|ADU45169.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 375

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 128/349 (36%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK 172
           G    +   +F            A             ++S   + A M  L   T    +
Sbjct: 47  GFLGMLVPEAFGGSDTGMVAYTLALEEIAAGDGACSTIVSVHSSVACMPILKFGTDEQKQ 106

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+               G  LTE + G+D + + +  ++  D        +
Sbjct: 107 RFLPKLASGEW-------------IGGFALTEPQAGSDASNLRTTARRDGDHYVINGAKQ 153

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  S       I+ A  +   G   +   +      G    R+++K+G  S+ T +L F+
Sbjct: 154 FITSGQNGQLIILFAVTDPSAGKKGITAFIVPTDTPGYEVVRVEDKLGQHSSDTCQLAFN 213

Query: 293 NTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +        LG                 +  A  +V   R +   A  YAR R   G  +
Sbjct: 214 DMRIPADLRLGAEGEGLKIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+   +   +AD+A  IAAA  +    A+  +       EA+ A+++A        + A 
Sbjct: 274 IEHQAVAFRLADMATRIAAARQMVLHAASLREAGLPCLTEASMAKLLA-------SETAE 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           AV + A++ +GG GY+++  + R YR+     I  G+ +   + +   L
Sbjct: 327 AVCSSAIQTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRIVIARNL 375


>gi|148545651|ref|YP_001265753.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148509709|gb|ABQ76569.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 592

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 96/543 (17%), Positives = 194/543 (35%), Gaps = 66/543 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E  +  A    P   A    G  WD   V     +          G      D  F
Sbjct: 42  AVLEEAGKVTAKTIAPLSRAADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLF 101

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +   +A   +   +   + L  G     +  +   +    +  + + + P +++  + 
Sbjct: 102 GGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVW- 160

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
                       A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D   
Sbjct: 161 ------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTE 208

Query: 242 --AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ L +     G+ N      +++K+G +++AT  
Sbjct: 209 NIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCV 268

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + F    G+++G+ N     +  M     L   I  ++    S   A+ YAR R  S   
Sbjct: 269 MNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAP 328

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA----- 391
                       +I  P ++R +  +   I    A S  +A   D AK  SE+A+     
Sbjct: 329 AGPQAKDKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYVAMQLDSAK-YSEDASVRKRS 387

Query: 392 --YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ P+ K +   +         +  GG GYI E    +  R+     I  G+   
Sbjct: 388 EELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGI 447

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             LD++   ++  G   ++     + Q +  +G ++    +   +   +  GL  ++ ++
Sbjct: 448 QALDLMGRKVVASGGAYYKLFSDEIRQFITGAGSELDEFAKPLGASLDQLDGLTEWVLQQ 507

Query: 508 IAL----ASSAAALYRAGMNDIADVFL--------ENRFLDNCHSTHCMLHGRFNAAHII 555
                    +A+  Y      +A  ++        +    D    +  +   RF  A ++
Sbjct: 508 AKGNPNEIGAASVEYLHAFGYVAYGYMWALMARAAQAGEGDAPFYSGKLGTARFYFARLL 567

Query: 556 DSL 558
             +
Sbjct: 568 PRV 570


>gi|124268544|ref|YP_001022548.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124261319|gb|ABM96313.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 410

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 138/374 (36%), Gaps = 23/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    L R+    G+H      ++        AH +    +   +   
Sbjct: 51  PRAADIDRDNQFP--PDLWRKLGDLGVHGMTVGEAYGGTGLGYLAHMVAMEEISRASAAV 108

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +      + PK+ S E+                L ++E   
Sbjct: 109 GLSYGAHSNLCINQLHRNGSEAQKGRYLPKLVSGEH-------------VGALAMSEPNA 155

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ E   G   V  L+ +   
Sbjct: 156 GSDVVSMKLRAERRGDRYVLNGAKMWITNGGDADTMVVYAKTEPEAGAKGVTALIVEKGF 215

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            GL +    +K+G R + T  + F +    +   L    G V+ +   +  + A++S   
Sbjct: 216 KGLSFGSKLDKLGMRGSNTYPVFFEDCEVPVDNVLGQEGGGVKVLMSGLDYERAVLSAGP 275

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   +   + Y   R   G  + +  +M+  +AD+    +A  A  + +  + D   
Sbjct: 276 LGIMAACMDLVLPYVHDRKQFGQSIGEFQLMQGKLADMYTTFSACRAYVYAVGQACD--- 332

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R++ +   R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 333 -RADHSRSLRKDAAGAILYAAEKATWMAGEAIQVLGGNGYINEYPAGRLWRDAKLYEIGA 391

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 392 GTSEIRRMLIGREL 405


>gi|120402719|ref|YP_952548.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955537|gb|ABM12542.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 389

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 124/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       F                       A
Sbjct: 36  PHAADVDENSRFP--QEALDALNASGFNAVHVPEEFGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I S E                   L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKKVLPSIASGE-------------AMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAAAMRTRAKADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISAFMVHIDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFTIGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     ++ Y + R   G  + +   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 258 QAVGIAQGALDASLEYVKDRKQFGKSISEFQAVQFMLADMAMKVEAARLMVYSAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GEGN------LGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 372 YEGTNQIQRVVMSRALLK 389


>gi|224825342|ref|ZP_03698447.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602263|gb|EEG08441.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 386

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 145/400 (36%), Gaps = 34/400 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            +A+E AR         H   P    WD+ E  P     LRR+   G       + +  +
Sbjct: 14  DSAREFAR---------HELAPYAAHWDEEEVFP--KDTLRRAGEMGFCGLYTPQQYGGL 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                    ++     + M+       V + W P + S       
Sbjct: 63  GLTRLDAAIVFEELAAGCTSTAAYLTIHNMVSWMIGSFARAEVAEQWGPALASG------ 116

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                  +      LTE   G+D A + ++ ++  D +Y L+G K F+S   S   +++ 
Sbjct: 117 -------AKLGSYCLTEPGAGSDAANLRTRAERDGD-VYRLNGSKAFISGAGSTDVLVVM 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
              G  G   +   +      G+ Y + + K+G  S  T  + F N        L     
Sbjct: 169 ARTGGTGAKGISAFVVPADLPGISYGKKERKMGWNSQPTRTITFDNVAVPSANLLGEEGQ 228

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  SV   + +L  A  Y + R   G  L +   ++  +AD++ 
Sbjct: 229 GFTFAMKGLDGGRINIATCSVGTAQAALEAAARYVQERQQFGQALAEFQTVQFRLADMST 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D           A     + K +       V+ EA++  GG GY
Sbjct: 289 ELVAARQMVRLAAWKLDSGSPD------ATAYCAMAKRFVTDAGFKVVNEALQLFGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           I+E  + RH R+S  + IL G+   M + V   L +   L
Sbjct: 343 IKEYPLERHLRDSRVHQILEGTNEIMRVIVARRLLQDGAL 382


>gi|291303470|ref|YP_003514748.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572690|gb|ADD45655.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 391

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 127/358 (35%), Gaps = 22/358 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
                   LH       +                   A   +  + + +      + L  
Sbjct: 49  YDALRSADLHAPHIPEEYGGAGIDALGTAIVIEEVARACASSSLIPAVNKLGTMPLLLAA 108

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + P + S E                   L+E   G+D+A + ++ +K  D   
Sbjct: 109 SDELKRKFLPPVASGE-------------AMFSYCLSEPEAGSDVAGMKTKAEKDGDAFV 155

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                +W  ++ +S  + + A  +   G   +   + D    G+ +   ++K+G + + T
Sbjct: 156 LNGAKRWITNAGVSRYYTVFAVTDPGKGAHGISAFVVDSEDEGVSFGAPEHKLGIKGSPT 215

Query: 287 VELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+ F N       L+G  N              +  A  +V   + +L  A  Y + R 
Sbjct: 216 REVYFDNVRVGADRLVGAENEGFKIAMRTLDHTRVTIAAQAVGIGQGALDYAAGYVKERQ 275

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D   ++  +AD A+ ++AA  L++  A     AKS  E+       A   K +
Sbjct: 276 QFGRAVADFQGVQFMVADAAMKLSAARQLTYTAA-----AKSEREDDDLTFYGAS-AKCF 329

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              +A  V  +A++ +GG GY  +  + R  R++    I  G+     + +     KG
Sbjct: 330 ASDVAMEVTTDAVQLLGGYGYTSDYPVERMMRDAKITQIYEGTNQVQRVVMAKQFLKG 387


>gi|56459982|ref|YP_155263.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56178992|gb|AAV81714.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 389

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 136/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    L ++    GL        +         H I    +   +   
Sbjct: 33  PRAAEIDEKNEFPG--DLWQKLGDMGLLGLTVAEEYGGSGMGYLEHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ + E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHRNGNEEQKQKYLPKLCTGEH-------------VGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P ++ F++ A+ E       +   + +   
Sbjct: 138 GSDVVSMKLRAEKKGDKYILNGNKMWITNGPEANVFVIYAKTEPEKNSRGITAFIVEKDT 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V+ +   +  + A+++   
Sbjct: 198 PGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGELNEGVKVLMSGLDYERAVLAAGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y   R   G  + +  +++  +AD+     AA A  + +A S D  +
Sbjct: 258 LGIMQACLDTCVPYIHDRKQFGKEIGEFQLIQGKVADMYTRTNAARAYVYAVAQSCDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDAAGA-------ILYAAELATQLALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|88859250|ref|ZP_01133890.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata
           D2]
 gi|88818267|gb|EAR28082.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata
           D2]
          Length = 385

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 141/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q  A  A           P    WD+    P    +++ +   G        
Sbjct: 2   DFNLTEDQQAFAETARQFA--QTELAPNAALWDREHIFP--KEVIKAAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M       +++    +  M+A   T  +   +  ++    
Sbjct: 58  EAGGLGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMIASFATDAIKNQYVDQLVMG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                        +     LTE   G+D A++ ++ +K  D  Y L+G K F+S    ++
Sbjct: 117 ------------QLLASYCLTEPGSGSDAASLKTKAEKQGDN-YVLNGSKMFISGAGETE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298
             +++A+  G  G   +   +      G+ Y + + K+G  +  T  + F N       L
Sbjct: 164 VLVVMARTGGE-GAAGISAFVVPADAKGVIYGKAEEKMGWNAQPTRLITFENVIISQDNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++ A  S+   + +L  A +Y + R   G  L     ++  
Sbjct: 223 LGQEGEGFKFAMQGLDGGRINIATCSIGTAQQALNTAKNYMQEREQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  +    A   D+                + K +   +   V  +A++ 
Sbjct: 283 LADMNTELVAARHMVRLAAFKLDQNDPEKTA------YCAMAKRFATDVGFKVCDDALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH R+   + IL G+   M L V   L
Sbjct: 337 HGGYGYIKEYPLERHVRDVRVHQILEGTNEIMRLIVGRRL 376


>gi|88796987|ref|ZP_01112577.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea
           sp. MED297]
 gi|88779856|gb|EAR11041.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea
           sp. MED297]
          Length = 381

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 140/395 (35%), Gaps = 27/395 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A  +  Q +   P   +WD+   HP    ++++    G +      ++    
Sbjct: 6   DIQVMMRDAARDFAQ-NELKPNSAKWDRSAEHPI--DIIKQLGETGFYGLTVPEAYGGSE 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                                 + S  +    S +A   +      W P + + E     
Sbjct: 63  AGYLSLALVVEEIAQGDGALSTITSVMNSVVCSPIAAYGSEAQKTQWLPALANGE----- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  + S G       ++  +  ++D  I+ A
Sbjct: 118 --------KLGAFCLTEPHAGSDAAALKTRAVRTSTGWRLNGTKQFITNGAIADLAIVFA 169

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             +   G   +   L      G     +++K+G R++ T +L F +       LLG    
Sbjct: 170 VTDPDKGKKGLSAFLVPAHLPGFEVPVVESKMGQRASDTAQLVFKDIELPEDALLGAEGQ 229

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A   V   + +   A  YA+ R   G  L+D   +   +AD+  
Sbjct: 230 GYAIALGNLEGGRIGIAAQCVGMAQAAFDVAASYAQERESFGTRLMDHQAVAFRLADMDT 289

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +  A   D       EAA A       K +   MA  V+++AM+ +GG GY
Sbjct: 290 QIEAARQLVWNAARRKDAGLPALREAAMA-------KLFASDMAEKVVSDAMQTLGGYGY 342

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           + +  I + YR+     I  G+ +   + +   +E
Sbjct: 343 LTDFPIEQIYRDVRVARIYEGTSDIQKMIIARDIE 377


>gi|15595704|ref|NP_249198.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099493|ref|ZP_01363411.1| hypothetical protein PaerPA_01000505 [Pseudomonas aeruginosa PACS2]
 gi|218889248|ref|YP_002438112.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254243600|ref|ZP_04936922.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192]
 gi|9946371|gb|AAG03896.1|AE004487_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126196978|gb|EAZ61041.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192]
 gi|218769471|emb|CAW25231.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 598

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 86/488 (17%), Positives = 175/488 (35%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E ++        L+      G  +D   V     +     + +  G +    
Sbjct: 36  DMVAAILDEGSKFCEQVLAPLNRSGDEEGCHFDNGVVTTPKGFKEAYAQYVEGGWNGVAS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   + +  G     +  + S +    +      +  ++ +
Sbjct: 96  DPAYGGQGLPHSLGLLLSEMIGASNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   GTD+  I ++    +DG + +SG K F+S+   
Sbjct: 156 GTWTGT-------------MCLTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEH 202

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G+ N +    +++K+G +++
Sbjct: 203 DLSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L + +  +     S   A+ YAR R  
Sbjct: 263 ATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        AL++  A   D      +A  R
Sbjct: 323 MRSLTGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAER 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A     + PI K +  +    V    M+  GG GYI E  + +  R+     I  G+
Sbjct: 383 ERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + Q   +  +     L+  ++           L
Sbjct: 443 NGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQAEH--PQLKGQVAQLAALNAQWGEL 500

Query: 505 TEKIALAS 512
           T+++ LA+
Sbjct: 501 TQQVGLAA 508


>gi|262280256|ref|ZP_06058040.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262258034|gb|EEY76768.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 607

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 87/459 (18%), Positives = 176/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVTTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADSGIGERNAVTCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRLLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AAY           PI K +  ++        M
Sbjct: 357 AEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAANNGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +     + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|312960844|ref|ZP_07775349.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311284502|gb|EFQ63078.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 375

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 128/374 (34%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     +      G    +    +            A           
Sbjct: 24  PFAAEWDREHRFP--REAIGEMAELGFFGMLVPEQWGGCDTGYLAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L     +    +   + S              ++     LTE + 
Sbjct: 82  STIMSVHNSVGCVPILTFGNAQQKAQFLTPLASG-------------AMLGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ +   D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLKTRARLDGDHYVLNGCKQFITSGQNAGVVIVFAVTDPTAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F +    +   L     G    +  L    +  A  +
Sbjct: 189 PGYSVARVEDKLGQHASDTCQILFEDVKVPVANRLGEEGEGYRIALANLEGGRVGIASQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YAR R   G  LI+   +   +AD+A  IA A  +    A   D  K
Sbjct: 249 VGMARAAFEAARDYARERESFGKALIEHQAVAFRLADMATQIAVARQMVHYAAALRDSGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAEKVCSAALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDIQRMVISRNL 375


>gi|148252398|ref|YP_001236983.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404571|gb|ABQ33077.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 596

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 94/491 (19%), Positives = 176/491 (35%), Gaps = 64/491 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALL 107
                     V      E A++A      L      G+     R D   V     +    
Sbjct: 27  LPGFSDASADVREAIIGEAAKLAEE---VLQPLNRVGDLEGCKRHDDGSVTTPKGFKEAY 83

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           ++    G         +                   A +        ++ + + + +  +
Sbjct: 84  KQVAEGGWLGLSAPTEYGGQGLPVTLSQTVNEFQCSANMAFSMYGGLTMGATAALIVHGS 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ + E+  T             + LTE   GTD+  + ++  + +DG + 
Sbjct: 144 EEQKKTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFK 190

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           +SG K F+S+   D       ++LA++EG       V  F+VP+ L +     G  NG+ 
Sbjct: 191 ISGTKIFISAGEHDLADNIIHLVLARIEGAPAGIKGVSLFVVPKFLVNPDGSVGQRNGVT 250

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  + + N  G+L+G+ N     +  M     L  A+  ++   V+
Sbjct: 251 CGSIEHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVA 310

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF----- 374
              A+ YAR R                  +I  P ++R +  I     AA A+       
Sbjct: 311 YQNAVAYARERIQGRSLTGPKAPDKAADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLK 370

Query: 375 -RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             +A+   + K R     +  +M P+ K +   M  A    A +  GG GYI E  + + 
Sbjct: 371 SDVAHRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVAAQQMYGGHGYIAEWGMEQF 430

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL-----EQDLGSSGKKVITI 486
            R++    I  G+     LD++   L   G       F+ +     EQ    + K  +  
Sbjct: 431 VRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFNEVGSFAKEQGGHDAMKPFVAP 490

Query: 487 LRDSISLCKED 497
           L  ++   ++ 
Sbjct: 491 LSTALGHLQQA 501


>gi|332286282|ref|YP_004418193.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330430235|gb|AEC21569.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 392

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 147/397 (37%), Gaps = 22/397 (5%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VR 129
            ++ R A ++  Q     P     D  +  P    L R+    G+     D ++    + 
Sbjct: 14  LDMLRDAVHDFAQAE-IAPRAAEIDHSDQFPM--DLWRKFGDLGVLGMTADEAYGGTNMG 70

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH I    +   +   A    + S    + +    T    + + PK+ S E+      
Sbjct: 71  YLAHMIVMEEISRASASVALSYGAHSNLCVNQIHRNGTEAQKQKYLPKLISGEH------ 124

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  + QK  D         W  + P +D  ++ A+ 
Sbjct: 125 -------VGALAMSEPGAGSDVVSMKLRAQKKGDRYVLNGNKMWITNGPDADTLVVYAKT 177

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + +    G    +  +K+G R + T EL F +        L    G V
Sbjct: 178 DPEAKQRGITAFIIEKGYKGFSIAQKLDKLGMRGSHTGELVFQDCEVPEENILGELNGGV 237

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+   +
Sbjct: 238 KVLMSGLDYERAVLAGGPLGIMQGVMDVVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ A  + +  + D+    S  A   R        +C + A  +  E ++ +GG+GYI 
Sbjct: 298 QASRAFCYAVGKNLDQ--LGSGHAREVRKDCAAVILYCAEKATWMAGEGIQILGGNGYIN 355

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           E    R +R++    I  G+     + +   L   T 
Sbjct: 356 EYPTGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETA 392


>gi|110834101|ref|YP_692960.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110647212|emb|CAL16688.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 387

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 144/382 (37%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D     P    + ++    G+        +    +   AH +    +   +   
Sbjct: 31  PIAAEVDSSNEFPV--EMWKKLGDLGVLGVTVSEEYGGANMGYLAHTLVMEEISRASASI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + + L       + + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIYLNGNDAQREKYLPKLVSGEH-------------IGALAMSEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++T +  K  D         W  + P +  +++ A+ +   G   +   + + S 
Sbjct: 136 GSDVVSMTLRADKQGDHYVLNGNKMWITNGPDAHTYVIYAKTDTNAGPRGITAFIVERSF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +       + NV     E +K+L+  LD     +S
Sbjct: 196 AGFSQAQKLDKLGMRGSNTCELVFQDCRVP---EENVLGSVGEGVKVLMSGLDYERTVLS 252

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G    + +A       Y   R   G  + +  +M+  IAD+ + + A+ +  + +A + D
Sbjct: 253 GATTGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIADMYVTLNASRSYLYNVAKACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +C + A  +  EA++ +GG+GYI E    R  R++    
Sbjct: 313 RGETNRKDAAG-------VILYCAENATKMALEAIQALGGNGYINEYPTGRLLRDAKLYE 365

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 366 IGAGTSEIRRMLIGRELFNETA 387


>gi|126433697|ref|YP_001069388.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233497|gb|ABN96897.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 388

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 145/399 (36%), Gaps = 39/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E V++ TA   A              P    WD+    P    +LR +   G+       
Sbjct: 10  ERVIAETAAAFAE---------KRLAPYASEWDESHHFPT--DVLREAAELGMAAIYCRE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R       A       +S     A MV    +    K W P++ S E
Sbjct: 59  DVGGSGLRRVDAVRIFEQLSAADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D +A+ ++  +  D    L G K F+S    SD
Sbjct: 119 -------------SIASYCLTEPGAGSDASALRTKAVREGDHF-VLDGVKQFISGAGSSD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   + +    G+ +   + K+G  +  T ++ F          
Sbjct: 165 VYVVMART-GSEGPRGISAFVVEKDTPGVSFGAQEQKMGWNAQPTAQVVFEGARVPAENM 223

Query: 302 LNV------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L          G   +      L+ A  S+ G + +  +A  Y   R   G  L+D+P +
Sbjct: 224 LGGTDAEGSGFGIAMNGLNGGRLNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTI 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  +  +  L +R A + DE      E      +  + K +       V  +A
Sbjct: 284 RFTLADMATALQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++  GG GY+ E  I +  R+   + IL GS   M + +
Sbjct: 338 LQLHGGYGYLREYGIEKIVRDLRVHRILEGSNEIMRVVI 376


>gi|261202146|ref|XP_002628287.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239590384|gb|EEQ72965.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239612094|gb|EEQ89081.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 410

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 143/377 (37%), Gaps = 22/377 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R D     PA   + ++    G      D  +  +    QAH +    +   +     
Sbjct: 46  AARTDLQNDFPA--DMWQKLGEAGFLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGL 103

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + ++L  +P     + P + S E                 L ++E   G+
Sbjct: 104 SYAAHSQLCVNQLSLNGSPEQKARFLPGLISGE-------------KIGALAMSEHSAGS 150

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ ++ +  + +  G        W  + P +D  ++ A+ +   G   +   + + +  G
Sbjct: 151 DVVSMKTTAKAVDGGFLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKG 210

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R + T EL F   F     +LG+LN     + +   L  L  +   + 
Sbjct: 211 FSCARKLDKLGMRGSNTGELIFEGVFVPRENMLGELNRGVKVLMEGLDLERLVLSAGPLG 270

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M+ +L   + Y   R   G  +    +++  +AD+   ++A+ A ++  A   DEA + 
Sbjct: 271 IMQAALDLVLPYTHTRKQFGIPIARNQLIQGKLADMYTKLSASRAYTYTTARQIDEAAAS 330

Query: 387 SEEAAYA---RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           S EA+ +            +  + A     +A++ +GG+GYI E    R  R++    I 
Sbjct: 331 SSEASNSAIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIG 390

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +  +  K
Sbjct: 391 AGTSEIRRMLIGRVFNK 407


>gi|197119199|ref|YP_002139626.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197088559|gb|ACH39830.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 385

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 136/376 (36%), Gaps = 23/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+ +  PA+ A L++    G         +            A      A    
Sbjct: 26  PLAARLDREDDRPAFLANLKKLAELGFMGLNVSAEYGGSEAGVVAFSVAMTEIARACAST 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S +     ++  + +    K + P+I S EY             A    LTE   G
Sbjct: 86  AVTVSVNNMVCEVIQAIGSAEQKKKYIPRICSGEY------------AAGAFALTETGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +D A +T+      D         +  S+P +  F++ A  +        +   L +   
Sbjct: 134 SDPAGMTTSAVAEGDQWVLNGSKIFITSAPYAGVFVVWAVTDKDAPKGKGISCFLVEQGA 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   + + K G  ++AT E+ F N       L+G LN              +    + 
Sbjct: 194 PGLVIGKQEEKTGQHASATCEVLFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGIGSLG 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     ++  A  YA  R   G  + +   ++  +A+   ++ AA  L  + A   D  K
Sbjct: 254 LGVGLAAMDFATRYASERVQFGQKITNFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGK 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S ++EA+ A++       +  + A      A++ +GG GY  +  + R+ R++   +I  
Sbjct: 314 SFAKEASMAKM-------YATEAANRACYSAVQMLGGYGYTRDFPVERYARDARITAIYE 366

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 367 GTNEIQRVIIAREILR 382


>gi|306840636|ref|ZP_07473388.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306289374|gb|EFM60610.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 375

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQIVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|149469715|ref|XP_001519538.1| PREDICTED: similar to acyl-CoA dehydrogenase, short-chain-specific
           [Ornithorhynchus anatinus]
          Length = 350

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 133/360 (36%), Gaps = 30/360 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           ++    GL        F            A           G +MS + +      L   
Sbjct: 10  KKMGELGLLAMDVPEEFNGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFG 69

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W     S                     L+E   G+D  A ++  +   D   
Sbjct: 70  TKEQKQQWITPFTSG-------------DKIGCFALSEPGNGSDAGAASTTARAEGDSWV 116

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++  + A ++ A  +  +    +   L      GL   + ++K+G R+++T
Sbjct: 117 LNGTKAWITNAWDASATVVFATTDKALKHKGITAFLVPMPTPGLSLGKKEDKLGIRASST 176

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340
             L F +        L     P +  KI +  LD   + ++   + +A+     A+ YA 
Sbjct: 177 ANLIFEDCRIPRHHALG---EPGQGFKIAMQTLDMGRIGIASQALGIAQAALDCAVDYAE 233

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L     ++  +AD+AL + +A  L++R A   D  K   +EAA A++ A   
Sbjct: 234 KRMAFGAPLTKLQGIQFKLADMALALESARLLTWRAAMLKDNGKPYGKEAAMAKLAA--- 290

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                + A ++  +A++ +GG GY+ E    RHYR++    I  G+     L +   L K
Sbjct: 291 ----SEAATSIAHQAIQVLGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLK 346


>gi|327352743|gb|EGE81600.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 433

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 155/413 (37%), Gaps = 35/413 (8%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           H+EL  L E V     QE  R      P+         R D     PA   + ++    G
Sbjct: 46  HEELVELRERV-----QEFTR---REIPE-----EVAARTDLQNDFPA--DMWQKLGEAG 90

Query: 115 LHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                 D  +  +    QAH +    +   +        + S    + ++L  +P     
Sbjct: 91  FLGVTADEQYGGLSMGYQAHCVVLEEISRASGSIGLSYAAHSQLCVNQLSLNGSPEQKAR 150

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S E                 L ++E   G+D+ ++ +  + +  G        W
Sbjct: 151 FLPGLISGE-------------KIGALAMSEHSAGSDVVSMKTTAKAVDGGFLLNGTKMW 197

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D  ++ A+ +   G   +   + + +  G    R  +K+G R + T EL F  
Sbjct: 198 ITNGPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEG 257

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            F     +LG+LN     + +   L  L  +   +  M+ +L   + Y   R   G  + 
Sbjct: 258 VFVPRENMLGELNRGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGIPIA 317

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA---RIMAPITKYWCCKM 407
              +++  +AD+   ++A+ A ++  A   DEA + S EA+ +            +  + 
Sbjct: 318 RNQLVQGKLADMYTKLSASRAYTYTTARQIDEAAASSSEASNSAIRTQDCAGAILYAAER 377

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A     +A++ +GG+GYI E    R  R++    I  G+     + +  +  K
Sbjct: 378 ATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMLIGRVFNK 430


>gi|91793117|ref|YP_562768.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91715119|gb|ABE55045.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
          Length = 583

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 93/488 (19%), Positives = 178/488 (36%), Gaps = 54/488 (11%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGER-----WD-KVEFHPAWHALLRRSIHDGLHCSI 119
            S   +E A++   N   +H     G+       D KV     + A        G     
Sbjct: 40  ASAILEEAAKL---NRDVMHPLNRSGDEQGVSFVDGKVITPDGFKAAYDTFAQGGWVGLC 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  F  +   +   +    +   A        S +  +A  +    +  +   + P ++
Sbjct: 97  GDPEFGGMGMPKMLGVLVDEMGYSANNSFTLYSSLTAGAALCIHAHASDELKTTYLPHLY 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +             A  + +TE + G+D+  I ++     DG Y ++G K F++   
Sbjct: 157 SGHW-------------AGAMDMTEPQAGSDLRNIRTKAVPQEDGSYQITGSKIFITGGD 203

Query: 240 SD-----AFIMLAQVEG--RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
            D       ++LA++     +  FLVP++  +     G  NG+    +++K+G +++AT 
Sbjct: 204 QDLTENVIHLVLAKLPDSNGISLFLVPKIAVNADGSLGEANGVTVGSIEHKMGLKASATC 263

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-- 345
            + F +  GFL+G+ N     +  M     L   I  +   + +   A  YA  R     
Sbjct: 264 VMNFDSARGFLIGEANRGLACMFTMMNYERLAIGIQGLGSAQAAYQMARDYANERIQGTA 323

Query: 346 -------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-----EEAAYA 393
                     +I    ++R +  +     A  AL+       D AK  +     + A Y 
Sbjct: 324 ADATEKRNDPIIVHGDVRRMLLTVNAMTQAGRALAVMTGKQLDLAKYATGDIQQKAAKYV 383

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +           + +  GG GYI E  I +  R++    I  G+     LD
Sbjct: 384 GLLTPVAKAFLTDRGLDATIMSQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQALD 443

Query: 454 VLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL----TEK 507
            +     G +L     L   ++ +L S  K      +  +S        A+F+     + 
Sbjct: 444 FIGRKVTGDDLHALSLLVDDIKVELASFDKIKPEDKQAVLSRLDALMQTAQFVNDNKAQH 503

Query: 508 IALASSAA 515
            AL +++A
Sbjct: 504 PALLNASA 511


>gi|311106641|ref|YP_003979494.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761330|gb|ADP16779.1| acyl-CoA dehydrogenase, middle domain protein 8 [Achromobacter
           xylosoxidans A8]
          Length = 597

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 137/523 (26%), Positives = 224/523 (42%), Gaps = 34/523 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTP 82
            P   G + Y+ D  L  L+  + P   H +L    + +G+         LA +A+   P
Sbjct: 26  APDCAGQDFYALDRGLQDLLRLYVPEAAHAKLLPQFQRMGQLAGGR-LNALATVADKFPP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LH     GE  D +E+HPA+  +   +  D   H                   + A  Y
Sbjct: 85  VLHPRTRWGEDEDWIEYHPAYQEMEHIAFADFQFHAMSHRAGVLGCDAPLPPVAKYALQY 144

Query: 142 LMAQLEAGHLMSPSV--TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G +   SV  TS  ++    +P + +   P++ S + D         T     
Sbjct: 145 LFVQAEFGQMCPISVSDTSIHLIRKFGSPALQEKLLPRMLSSDPD---------TLWKGT 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+ A+ +  +++ DG + L G KWF S   +D  ++LA+ EG       +
Sbjct: 196 QFMTEKAGGSDVGALETVARQV-DGTWRLHGEKWFCSHTDADVALLLARPEGAPAGTRGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR LEDGS N     RLK+K+G RS A+ E+       +L+G ++     + +  
Sbjct: 255 ALFAMPRRLEDGSRNAYRIVRLKDKLGTRSMASGEIRLEGAQAYLVGQVDQGLKHMMEQV 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L   + + + MR  L EA+  AR RH  G  ++  P+++R +  +     AA ++ 
Sbjct: 315 NLSRLSHGVRAAAMMRRCLNEAMLAARHRHAFGRDVMAYPLLRRQLLKLLTPTEAALSMV 374

Query: 374 FRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A+    A+     AA   R++ P+ K   C+   +V   AME  GG+GYIE+   AR
Sbjct: 375 MATADIMRRAQEGDTAAAPVLRLLTPLLKLRTCRDNVSVATGAMEVRGGNGYIEDFINAR 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R++    +  G+ N   LD +    +     E L + LE  +      +    R ++ 
Sbjct: 435 LVRDAHIGVLWEGTSNINALDAIQRAVRKERAHEALSALLESRI-EQATALPAAWRATLR 493

Query: 493 LC-KEDKGLARFLTEKIALASSAAALYRAGMN---DIADVFLE 531
            C +   GLA  +    A     A + RA        A VF+ 
Sbjct: 494 DCLRRAVGLAEAVG---ADEKHEAQVRRAASALYYVSAAVFMA 533


>gi|23012171|ref|ZP_00052323.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 463

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 88/440 (20%), Positives = 171/440 (38%), Gaps = 48/440 (10%)

Query: 49  NFPSVVHKELELLGEYVLS----CTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHP 101
              + +   L   G  + S        E  R+A      L+      G  +    V   P
Sbjct: 15  RHVAGLDAVLAQSGAEIASEDAVAILAEAGRLAGEVIAPLNRIGDRHGTPFSDGTVTTAP 74

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            W    R  +  G +  +       +     H I AA   +         + P +T+  +
Sbjct: 75  GWREAYRAFVEGGWNGVLASPDHGGMGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGI 132

Query: 162 VAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL    +  +   +  K+ S E+                + LTE + G+D++ + S+ +
Sbjct: 133 EALAAHGSDALKSRYLDKLVSGEW-------------TATMNLTEPQAGSDLSGLRSRAE 179

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPN 268
              DG Y ++G K +++    D       ++LA+++        +  FLVP++L DG+ N
Sbjct: 180 PHGDGSYRITGAKIYITYGEHDLADNIVHLVLARLKDAPSGTRGISLFLVPKVLPDGTRN 239

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            L    L++K+G   + T  + F +     G+L+G+ N     +  M     L+  +  V
Sbjct: 240 DLRCSGLEHKLGIHGSPTCSMAFGDGGGATGWLIGEENRGLACMFTMMNSARLNVGLQGV 299

Query: 326 SGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLA 377
                +  +A+ YAR R              ++    ++R +  +    AAA  + +  A
Sbjct: 300 GVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADVQRMLLTMKAYTAAARGICYLTA 359

Query: 378 NSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R
Sbjct: 360 QGLDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMR 419

Query: 436 ESPANSILLGSGNAMVLDVL 455
           ++    I  G+     +D++
Sbjct: 420 DARILGIYEGTNGIQAIDLV 439


>gi|295395834|ref|ZP_06806022.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971369|gb|EFG47256.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 381

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 126/346 (36%), Gaps = 16/346 (4%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
             I    F P V ++   + A  L     +E       S +    V  + +  V      
Sbjct: 46  ALIATDFFAPHVGEEYGGVGADALATAIVIEEVARGCMSSSLIPAVNKLGSMPVI----- 100

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I   E       P          GL+E+  G+D A + ++  +  DG        W  +
Sbjct: 101 -IGGGEEVKQAYLPRLARGEGFSYGLSEREAGSDTAGMKTRAVRDGDGWVLNGVKTWITN 159

Query: 237 SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + +S+ + ++A  +        +   + +    G  +   + K+G + + T EL F + +
Sbjct: 160 AGVSEFYTVMAVTDPDGKRGNNITAFVVEKGDEGFSFGEKERKLGIKGSPTRELFFEDCW 219

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G    +K L    +  A  +V   + +L  AI Y + R   G  + D 
Sbjct: 220 IPDSRRVGEEGQGLKIALKTLDHTRVTIAAQAVGVAQGALDYAIDYVKERKQFGKRIADF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A  + AA  L++  A   +                   K +   +A  + 
Sbjct: 280 QAIQFMVADMATKLEAARQLTYAAAAKSERNDDD------LSFFGAAAKAYASDVAMEIT 333

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A++ +GG+GY+ +  + R  R++    I  G+     L +   L
Sbjct: 334 TDAVQLLGGAGYVVDHPVERMMRDAKITQIYEGTNQVQRLVMGRKL 379


>gi|296395345|ref|YP_003660229.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296182492|gb|ADG99398.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 386

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 138/404 (34%), Gaps = 32/404 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   +EL R A     +     P     D+ E  P           +G        
Sbjct: 9   QFALSDEQEEL-RAAVRALSE-REIQPHATDVDEHERFP--REAAEALAKNGFSAPHIPE 64

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +                       +  + + +    + + L  +  + K   P I S E
Sbjct: 65  QYGGEGADAVSCCVVVEEIARVCASSSLIPAVNKLGTTGLILNGSEELKKKVLPSIASGE 124

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GL+E+  G+D A++ ++ +   D         W  +   S  
Sbjct: 125 -------------AFASYGLSEREAGSDAASMRTRARAAGDDWVLDGSKCWISNGSESTW 171

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F ++A  +   G   +   +      G      + K+G + + TVEL F +     +   
Sbjct: 172 FTVMAVTDPDKGAHGISAFIVHRDDEGFSVGGKEKKMGIKGSPTVELLFDHCK---IPGD 228

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
            V   P    K  L  LD    ++    V +A+     A+ YA+ R   G    +   + 
Sbjct: 229 RVIGEPGSGFKTALQSLDHTRPTIGAQAVGIAQGALDIAVAYAKERKQFGRATTEFQGVS 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I AA  + +  A   +        AA +  ++   K +   +A  V   A+
Sbjct: 289 FMLADMAMKIQAARLMVYASAERAERG------AAGSTALSSAAKCFASDVAMEVTTNAV 342

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +GG+GY  +  + R  R++    I  G+     L +   L +
Sbjct: 343 QVLGGAGYTRDFPVERMMRDAKITQIYEGTNQIQRLVMSRALLR 386


>gi|41409490|ref|NP_962326.1| FadE25_4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118462363|ref|YP_883384.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254776678|ref|ZP_05218194.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|41398321|gb|AAS05942.1| FadE25_4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118163650|gb|ABK64547.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 389

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 125/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENSRFP--QEALEALNAAGFNAVHVPEEYGGQGADSVAACIVIEEVARVDTSA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I                S      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKQVLPSI-------------ADGSAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRARADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISSFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFTVGPKEKKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKVESARLMVYHAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +      ++   ++  +K     +A  V  +A++  GG GY ++  + R  R++    I
Sbjct: 318 GE------SHLGFISAASKCLASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|170698594|ref|ZP_02889663.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170136528|gb|EDT04787.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 393

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 131/378 (34%), Gaps = 21/378 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+ +  P    L ++    G+        +    +   AH +    +   
Sbjct: 28  KEITPRAAEVDRTDQFPM--DLWKKFGDLGVLGMTVAEEYGGANMGYTAHMVAMEEISRA 85

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S E+                L ++
Sbjct: 86  SASIGLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------IGALAMS 132

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +  K  D         W  + P  D  ++ A+ +   G   +   + 
Sbjct: 133 EPNAGSDVVSMKLRADKRGDCYVLNGTKMWITNGPDCDTLVVYAKTDLDAGPRGITAFIV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L      V+ +   +  + A++
Sbjct: 193 EKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNCGVKVLMSGLDYERAVL 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S      M   L   + Y   R   G  + +  +++  +AD+     A  A  + +    
Sbjct: 253 SGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAYLYAVGRHL 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A   S+     R        +  + A  +  EA++ +GG+GYI E  + R +R++   
Sbjct: 313 DSA--GSDHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLY 370

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 371 EIGAGTSEIRRMLIGREL 388


>gi|311696106|gb|ADP98979.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 388

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 143/372 (38%), Gaps = 26/372 (6%)

Query: 92  ERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           + W++  EFH     L +++   GL    +  +   +         A    LM     G 
Sbjct: 38  DDWEEAGEFH---RDLYKKAGDAGLLGIGFPEALGGIGEGDIFLKVAVSEELMRSTSGGL 94

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +         +  +         WA K    +       P+ +      L +TE  GG+D
Sbjct: 95  VAGLGSLDIGLPPV-------ARWAKK----DIREQIVPPVLRGEKIAALAVTEPGGGSD 143

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +A + ++  +  D  Y ++G K F++S M      +A   G  G   +  LL D    G 
Sbjct: 144 VANLKTRAVRDGDH-YIVNGSKTFITSGMRADHYTVAVRTGGEGHGGISLLLIDRDMPGF 202

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              +   K+G  ++ T EL F +       L+G  N     +    +   L  AIM+   
Sbjct: 203 STGKKLRKMGWWASDTAELFFEDCRVPADRLIGAENAGFIAIMSNFLFERLSLAIMAYMT 262

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +++   A+ Y ++R   G  +    V +  + D+A  I  A   ++R A      K+  
Sbjct: 263 AQLAYEAALEYTQQRTAFGRNITGFQVTRHKLVDMATQIDVAREYTYRCAALMQAGKNPI 322

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E A A       K +   +   V  EA++  GG GY+ E  + R YR++   SI  G+ 
Sbjct: 323 KEVAMA-------KNFSVDVCEKVTREAVQLFGGMGYMRETVVERLYRDAKILSIGGGTT 375

Query: 448 NAMVLDVLNLLE 459
             M   +   ++
Sbjct: 376 EIMKELIAKQIK 387


>gi|209521554|ref|ZP_03270255.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209498024|gb|EDZ98178.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 596

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/474 (20%), Positives = 188/474 (39%), Gaps = 62/474 (13%)

Query: 73  LARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEP 126
           L   A      L      G+R      D V    P +    R+    G         +E 
Sbjct: 41  LDESAKLCGEVLAPLNVDGDRNPSSWKDGVVTATPGFKEAFRQFSEGGWQGVQHPLDYEG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYD 184
               +   I    + ++        + P +T  ++ AL+T  +    + + PK+ S E+ 
Sbjct: 101 QGLPK--LIGTPCVEMLNASNLSFALCPLLTDGAIEALLTAGSETQKQTFVPKLISGEWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE + G+D+A + ++ +   DG + L G K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAK 205

Query: 242 --AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+          +  FLVP+ L +     G  N +    +++K+G +++ T  
Sbjct: 206 NIVHLVLARTPNAPEGVKGISLFLVPKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAV 265

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +     G L+G+ N     +  M         +  V+    +  +A+ YA+ R  S
Sbjct: 266 LQFGDHGGAIGQLIGEENRGLEYMFIMMNAARFAVGMQGVAISDRAYQKAVAYAKERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                       +I  P ++R ++ +     A+ AL++  A+  D A    +EA  A+  
Sbjct: 326 RPVDGSAKQSVAIIQHPDVRRMLSTMRSLTEASRALAYVAASHCDVAHRHPDEATRAKHQ 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K W  +++  V +  ++  GG G+IEE   A++YR++    I  G+    
Sbjct: 386 AIYEYLVPIVKGWSTELSVDVASLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISLCKEDKG 499
             D++    L  G  + ++L + +    + LG+        ++  ++  +   G
Sbjct: 446 ANDLIGRKTLRDGGKVAKELLAGIAETVEALGAQQGAAFASMKTQLAQGQRALG 499


>gi|152985377|ref|YP_001346004.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960535|gb|ABR82560.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 592

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/529 (18%), Positives = 189/529 (35%), Gaps = 70/529 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+   F     ++    L  ++          LE  G+      A         
Sbjct: 10  DMRFVLNEV--FEVSRLWTQLPALADVVD--AETAAAILEEAGKVTAGTIA--------- 56

Query: 80  NTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
             P        G +W+   V     +    R     G      D ++  +   +   I A
Sbjct: 57  --PLNRPGDEEGCQWNAGAVSTPAGFPEAYRTYAEGGWVGVGGDPAYGGMGMPK--VISA 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
               L+        + P +T+ + +AL    +  +   + P +++  +            
Sbjct: 113 QVEELVNSANLSFGLYPMLTAGACLALNAHASDELKDKYLPNMYAGTW------------ 160

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
            A  + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++ 
Sbjct: 161 -AGSMCLTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLP 219

Query: 251 G------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                   +  FLVP++L +     G  N L    +++K+G +++AT  + F    G+L+
Sbjct: 220 DAPAGPKGISLFLVPKVLVNADGSLGERNSLGCGSIEHKMGIKASATCVMNFDGATGWLV 279

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G++N     +  M     L   I  ++    S   AI YAR R  S              
Sbjct: 280 GEVNKGLAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAAD 339

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITK 401
            +I  P ++R +  +        A S  +A   D AK      +R        ++ P+ K
Sbjct: 340 PIIVHPDVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
            +   M         +  GG G+I E    +  R+     I  G+     LD++   ++ 
Sbjct: 400 AFLTDMGLETTLHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKVIG 459

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            G          ++  + S+ + +    +   +  +  + L  +L ++ 
Sbjct: 460 SGGAFSRHFTDEIKAFVASADETLGEFSKPLAAAVENLEELTAWLLDRA 508


>gi|218673864|ref|ZP_03523533.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 500

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 90/479 (18%), Positives = 175/479 (36%), Gaps = 55/479 (11%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGER-WD-KVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L       G R  D  V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLIDGDVRLPDGWRDLYRNWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                +F          + A  ++    +      + ++ +   V+   +  + + +  K
Sbjct: 91  LTAPEAFGGQALPDMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALKETYLAK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   G+D+  + ++ ++ +DG Y + G K F++ 
Sbjct: 151 MVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITW 197

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              DA      ++LA++         +  FLVP+ L +     G+ N L    L++K+G 
Sbjct: 198 GEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + T  + + +          G+L+G+ N     +  M     L   +  V+    +  
Sbjct: 258 HGSPTCTMIYGDGRFGGEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAATQ 317

Query: 334 EAIHYARRRHVSGGI----------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
           +A+ YAR R                +++ P + R +  +      + A+S+  A++ D  
Sbjct: 318 KALAYARERTQGRAPGSTAAGMSSPIVEHPDVARMLLTMKALTQGSRAISYACAHALDMS 377

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             A         A ++ PI K +       V +  ++  GG G+IEE   AR+ R++   
Sbjct: 378 RRAGDSRHWQERAALLTPIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIA 437

Query: 441 SILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            I  G+       L    L   G +      +  E    + G+  +    ++ +     
Sbjct: 438 PIYEGTNGIQAIDLVTRKLPLSGGDQVMGFIAEFEAIAEAVGRSNLDGFGETAARLDAA 496


>gi|327267682|ref|XP_003218628.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 433

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 133/357 (37%), Gaps = 25/357 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL 164
           LL+     GL     D  +          I A             ++   +     ++ +
Sbjct: 94  LLKDLFEQGLMSIDLDAKYGGTGASFFSTILAVEELAKVDPSVSLVVELQNTFMNKLLTV 153

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + PK+                ++   + ++E   G+D  ++ ++ +K  D 
Sbjct: 154 YGTEEQKMTYLPKM--------------SRNLVGSVCISETGSGSDAFSLKTRAEKKGDY 199

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W   +  +  F ++A      G   +   + D +  GL  ++ +NK+G R+ 
Sbjct: 200 YIINGSKMWISLAEQAGVFFVMANANLSAGYKGITCFIVDRNTEGLHVEKKENKLGIRAT 259

Query: 285 ATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +T  + F N        +G          +M     +  +   +   +    + I Y ++
Sbjct: 260 STCPVTFDNVKVPESNIVGQFGKGYKYAIEMLNTGRIGISAQMLGLAQGCFDQTIPYIKQ 319

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R+  G  + +   M+  IA +A  I AA  L++  A   +  K   +EA+ A       K
Sbjct: 320 RNQFGKSIFEFQGMQHQIAHVATQIEAARLLTYNAARLAETGKPFIKEASMA-------K 372

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+  ++A    ++ +E +GG G+ ++  I ++YR+    +I  G+ N  +  +   +
Sbjct: 373 YYTAEVATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTSNIQLNTIAKCI 429


>gi|33599969|ref|NP_887529.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567567|emb|CAE31480.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 615

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 129/544 (23%), Positives = 221/544 (40%), Gaps = 34/544 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTP 82
            P   G++ ++ D  L  L++ +             E +G+        ELA +A+ + P
Sbjct: 26  APDCAGLDFFAIDPSLQQLLSVYVPGAELEYFRPHFERMGKLAGGR-LNELAMVADKHGP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LHA    GE  D +E+HPA+  +   +      H               +   +    Y
Sbjct: 85  VLHARSRWGEDEDWIEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYAGTLSPVTKYVFQY 144

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G +   SVT  S  ++    +  +     P++ +       K           
Sbjct: 145 LFVQSEFGQMCPISVTDTSIHLIRKFGSEALQARLLPRMLADNLQDLWKG---------T 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  + +  ++I DG + L G KWF S   +D  ++LA+ EG       +
Sbjct: 196 QFMTEKSGGSDVGQVETTARQI-DGQWHLHGEKWFSSHVDADIALILARPEGAPAGTRGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR  EDGS N     RLK+K+G RS A+ EL     F +L+GD       + +  
Sbjct: 255 ALFAMPRYREDGSRNSYRIVRLKDKLGTRSMASGELRIDGAFAYLVGDPTQGIKQMMEQV 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  A+ + + MR  L E++  AR R   G  ++D P+M+R +  + +   AA  ++
Sbjct: 315 NLSRLSHAVRAAAMMRRCLNESMQAARHRQAFGRQVVDYPLMQRQLLKLLVPTEAALTMT 374

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A++  +A     +  A  R++ P+ K   C+    V   AME  GG+GYIE+   AR
Sbjct: 375 MATADAMAKAYGGDAQCKAALRLLTPLLKLRACRDNVTVATGAMEVRGGNGYIEDFVNAR 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ----LFSTLEQDLGSSGKKVITILR 488
             R++    +  G+ N   LD +    +           L   L      +      +  
Sbjct: 435 LVRDAHIGVLWEGTSNINALDAIERAVRKDQAHIALRALLLEKLRAVRAQAPVIAGPLAE 494

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS---THCML 545
              + C+  +G+A     +  +  +A+ALY      +   +   +   +         ML
Sbjct: 495 AVAAACQLAEGVAGDPRHESEVRRAASALY-HASAAVLMAWEATQEGVDGRRLLLADAML 553

Query: 546 HGRF 549
             R 
Sbjct: 554 RTRL 557


>gi|153833157|ref|ZP_01985824.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01]
 gi|148870587|gb|EDL69495.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01]
          Length = 389

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 139/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L  +    GL     D  F        AH +    +   
Sbjct: 29  EHIAPIASDIDRDNQFP--NHLWSKFGEMGLLGVTVDEEFGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    +P   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGSPAQREKYLPKLIDGSH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNSGSDVVSMQLRAEDKGDHYLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  +K+G R + T EL F +       +LG+LN     +        +  
Sbjct: 194 EREFEGFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  + E + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMNAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMSLDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|21229724|ref|NP_635641.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66766601|ref|YP_241363.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21111212|gb|AAM39565.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66571933|gb|AAY47343.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 387

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 149/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEDI-DLLRESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    T    + + PK+
Sbjct: 60  VEEAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNATHEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                L ++E   G+D+ ++  + +   D         W  + P
Sbjct: 120 CTGEH-------------VGALAMSEAGSGSDVVSMKLRAEARGDRFVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPSAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|83309776|ref|YP_420040.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82944617|dbj|BAE49481.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 389

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 143/406 (35%), Gaps = 31/406 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           S    +L   A+     + A+      P     D+    P  + L  R    GL     D
Sbjct: 6   SALNFDLGETADMMRDSVAAFAATEIAPRAAEIDRSNEFP--NELWPRLGAMGLLGITVD 63

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +         H +    +   +        + S    + +    T      + PK+ S
Sbjct: 64  EKYGGAGMGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQIKRNGTEAQKMKYLPKLIS 123

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            EY                L ++E   G+D+ ++  + +K  D         W  + P +
Sbjct: 124 GEY-------------IGALAMSEPNAGSDVVSMKLKAEKKGDRYVLNGTKMWITNGPDA 170

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F +       
Sbjct: 171 DVIVVYAKTDVTAGPRGITAFLVEKTFKGFSVAQKLDKLGMRGSNTGELVFQDCEVPEEN 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L      V  +   +  +  +++   +  M   +   + Y   R   G  +    +M+ 
Sbjct: 231 VLGAVGKGVNVLMSGLDYERVVLTGGPLGIMAACMDVVVPYVHERTQFGQPIGTFQLMQG 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+     A  A ++ +A + D  ++  ++AA           +  + A  +  EA++
Sbjct: 291 KLADMYTTFNACRAYTYAVAKACDRGETSRKDAAG-------VILYGAEKATWMALEAIQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +GG+GYI E +  R  R++    I  G+     + +   L + T 
Sbjct: 344 TLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGRELFEETK 389


>gi|254237268|ref|ZP_04930591.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719]
 gi|126169199|gb|EAZ54710.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719]
          Length = 598

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 86/488 (17%), Positives = 175/488 (35%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E ++        L+      G  +D   V     +     + +  G +    
Sbjct: 36  DMVAAILDEGSKFCEQVLAPLNRSGDEEGCHFDNGVVTTPKGFKEAYAQYVEGGWNGVAS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   + +  G     +  + S +    +      +  ++ +
Sbjct: 96  DPAYGGQGLPHSLGLLLSEMIGASNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   GTD+  I ++    +DG + +SG K F+S+   
Sbjct: 156 GTWTGT-------------MCLTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEH 202

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G+ N +    +++K+G +++
Sbjct: 203 DLSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L + +  +     S   A+ YAR R  
Sbjct: 263 ATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        AL++  A   D      +A  R
Sbjct: 323 MRSLTGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAER 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A     + PI K +  +    V    M+  GG GYI E  + +  R+     I  G+
Sbjct: 383 ERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + Q   +  +     L+  ++           L
Sbjct: 443 NGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQAEH--PQLKGQVAQLAALNAQWGEL 500

Query: 505 TEKIALAS 512
           T+++ LA+
Sbjct: 501 TQQVGLAA 508


>gi|296168927|ref|ZP_06850596.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896396|gb|EFG76049.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 389

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 125/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENSRFPE--EALEALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I                +      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKQVLPSI-------------ADGTAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   +         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRAKADGEDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISSFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFTVGPKEKKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKDRKQFGRPVSDNQGVQFMLADMAMKLESARLMVYHAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++          ++  +K W   +A  V  +A++  GG GY ++  + R  R++    I
Sbjct: 318 GETN------LGFISAASKCWASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|254250103|ref|ZP_04943423.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124876604|gb|EAY66594.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 411

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 79/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 41  EDQRMIRDAARAFAT-EMLAPNAAQWDHDAHLPD--AIVAQLGELGLLGMIVPQELGGSY 97

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 98  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWL------------ 145

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
            A M    V     LTE   G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 146 -ADMAAGRVIGAFCLTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 203

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 204 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 260

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 261 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 320

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 321 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 373

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 374 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 411


>gi|300692750|ref|YP_003753745.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           PSI07]
 gi|299079810|emb|CBJ52487.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
          Length = 393

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 138/386 (35%), Gaps = 26/386 (6%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           ++   +L    P  E  D+ +  P  AW  +    +   L  ++ +      +   AH I
Sbjct: 24  DWAQAELA---PRAEAIDRSDQFPMDAWKQMGDLGV---LGITVAEEYGGANMGYLAHMI 77

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
               +   +        + S    + +    TP     + PK+ S E+            
Sbjct: 78  AMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKAKYLPKLVSGEW------------ 125

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
               L ++E   G+D+ ++  + ++  D         W  + P  D  ++  + E  +G 
Sbjct: 126 -IGALAMSEPNAGSDVVSMKLRAERRGDHYVLNGTKMWITNGPDCDVLVVYGKTEPELGA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    G    +  +K+G R + T EL F N        L    G    +   
Sbjct: 185 RGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPAENVLGEENGGTRVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD+   + A  A 
Sbjct: 245 LDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D      E     R        +  + A  +  EA++ +GG+GYI E    R
Sbjct: 305 LYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEFPTGR 362

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            +R++    I  G+     + +   L
Sbjct: 363 LWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|330938535|gb|EGH42120.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 592

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 89/493 (18%), Positives = 172/493 (34%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSIGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQA 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R      A ++ P++K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLAALLTPVSKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q +  S   +    +      
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFINGSSNVLSEFTQPLSKAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|325187778|emb|CCA22323.1| shortchain specific acylCoA dehydrogenase putative [Albugo
           laibachii Nc14]
          Length = 409

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 136/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     ++     GL        +            A           
Sbjct: 50  PIAGDLDREHRFPE--KQVKELGEMGLMGIDIKEEYGGAGLDYLAYAIALEEVSRGCAST 107

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  S      +A   T    +       S +                  GLTE   
Sbjct: 108 CIILSVHSSLYCGPIAQFGTEEQKQKHLIPFASGKQ-------------LGCFGLTEPGN 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  DG        W  ++   D  I+ A  +       +   +     
Sbjct: 155 GSDAGAASTTARETKDGFVINGTKAWTTNAHEGDQVIIFATTDKAQKHKGISAFIVPMKT 214

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    + + K+G R+++T  L   +     +   N+     E  KI +I LD+  + V+
Sbjct: 215 PGFSLGKKEEKLGIRASSTANLILEDVH---IPKENLLGRLGEGFKIAMITLDAGRIGVA 271

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     AI YA +R   G IL    +++  +AD+A++I AA  L+++ A   D
Sbjct: 272 AQALGIAQASLDCAIKYAHQRKAFGQILAKNAIIQSKLADMAMEIEAARLLTYKAAMDKD 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                ++ AA A++ A      C         +A++ +GG GY+ +    RHYR++    
Sbjct: 332 NGLPITKIAAMAKLKASEVATMCS-------HQAIQILGGMGYVSDMPAERHYRDARITE 384

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 385 IYEGTSEIQRLVIATSLNK 403


>gi|39934035|ref|NP_946311.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647883|emb|CAE26402.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 593

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 102/479 (21%), Positives = 187/479 (39%), Gaps = 63/479 (13%)

Query: 40  DSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD-- 95
           D +L++L  N  + +   +     G+Y    TAQ L     + +  L      G++    
Sbjct: 8   DDILLSL--NHGAGLQAAVAAGHFGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIK 65

Query: 96  ----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
               KV   P W    +R I  G +       F       A  + AA   + A       
Sbjct: 66  LEHGKVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPMA--VNAACTEIWASSNMAFG 123

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T +++ AL T  +  + + +  K+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTLSAIDALHTHGSDALKQVYLGKLISGEWTGT-------------MQLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLV 258
           D+ A+ ++ ++ +DG Y + G K F++    D        +LA++         +  FLV
Sbjct: 171 DVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     + 
Sbjct: 231 PKFLVNADGTLGARNDIYPSGVEHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIAD 361
            M     L   +  V     +  +A+ YA+ R               +I  P +KR +  
Sbjct: 291 TMMNQARLAVGLEGVGIADRAYQQALAYAQERKQGRAIGSAGPGSDPIIKHPDVKRTLLT 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEA 415
           +   I AA  + +  A + D A   ++       AA   ++ PI K +   +   V +  
Sbjct: 351 MRALIGAARTICYSTAVALDIAARSTDPKVKASAAARGALLTPIAKAFSTDIGIEVASLG 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL 472
           ++  GG G+IEE   A+HYR++    I  G+       L    L   G      L   L
Sbjct: 411 VQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVTRKLGANGGASVFALLDEL 469


>gi|325919917|ref|ZP_08181906.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325549626|gb|EGD20491.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 393

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 132/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 35  PYAAQWDAESHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++A      V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMATWLIASYGNDMVRAQWGEAMTSG-------------AKLGSYCLTEPGAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 140 SDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAFVVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F++        L     G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + +   L  G     
Sbjct: 373 TNEVMRMIIARHLLNGEEELR 393


>gi|310829333|ref|YP_003961690.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612]
 gi|308741067|gb|ADO38727.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612]
          Length = 379

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 134/377 (35%), Gaps = 34/377 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
              D+    P      ++    GL    + + +         + I    +  +    A  
Sbjct: 29  RERDETSTFPV--DAYKKMGEMGLIGLPYPKEYGGQGGDYLDYAIAVEEIAKVDGSVAIS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      V+   +    +++ P + S                    GLTE   G+D
Sbjct: 87  YSVSTSLYGGSVSNAASEEQKREFLPPVLSG-------------QSFGAFGLTEPNAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
                +   +  D  Y L+G K F  + P++D F + A  +       +   L      G
Sbjct: 134 AGGCITTATREGDH-YILNGAKCFNTNGPLADYFAVYALTQPEKKAKGLSCFLVKKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               ++++K+G R+    EL F N         N+     +  K+ +  LD   + V+  
Sbjct: 193 FSIGKIEDKMGIRAAQVSELIFDNCKIPA---ENLMGEEGQGFKVAMKTLDGGRIGVAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + LAE     A  Y  +R   G  L     +   + ++   I  A  + ++ A    E 
Sbjct: 250 GLGLAEGAFEIARKYLMQREQFGKPLYKNQYLAFKMVELECQIEQARLMLYKAALDKSEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA A+++       C   A  V  EA++ +GG+GY+++  + R  R++    I 
Sbjct: 310 RPYTLSAAKAKLL-------CTDAAMHVTTEAVQMLGGNGYMKDYHVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L +
Sbjct: 363 EGTNEIQKLVISGQLFR 379


>gi|327439047|dbj|BAK15412.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 550

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/556 (19%), Positives = 228/556 (41%), Gaps = 45/556 (8%)

Query: 33  GMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
             N Y  D  L  L+       F     ++L   G                   P+L  Y
Sbjct: 11  NQNFYEFDQTLHQLLQQKLSPSFYRYADEQLTAFGALCAGPIDARAKVTDREGEPRLRRY 70

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G+   +V  +  +   +  +   G+   +  +    +  K  +    A+ YL++Q E
Sbjct: 71  NAYGDEVSEVIVNEGYKQTVAETYATGIVGYV-HKDIPELGHKGNYVYSFAQGYLLSQTE 129

Query: 148 AGHLMSPS--VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            G     +  + +A ++    +  + + + P I +       +             LTE+
Sbjct: 130 PGFYCPVTLTMATAYLLEHYASEELKQKFMPHICATGDTELFEGATF---------LTER 180

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVE-----GRVGC--FL 257
           +GG+D+ A   + +    G + L G K+F  ++ M    ++LA+       G  G   F 
Sbjct: 181 QGGSDVGANVVEARLDQ-GEWRLYGEKYFASNAGMCGVAMVLARQTTNSKQGSKGLTLFA 239

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           VP   ++G  N +  +RLK+K+G ++  + E+EF+    +++GD +     + +   L  
Sbjct: 240 VPWREDNGELNHITIRRLKDKLGVKAVPSGEVEFNGAKAYVVGDPSKGIYYMLEALNLSR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +A  SV  M+ +L EA+HY   R   G  + + P+++ ++  +     A+    F L 
Sbjct: 300 ICNAAASVGIMKRALDEAVHYTNGRIAFGQKVAEFPMVQHSLGALHAKWHASLVALFDLV 359

Query: 378 NSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + +DE     +  +E    R++  + K    + A     EA+E  GG+GYIE+  + R  
Sbjct: 360 SRYDEVIGGNASEDEQQIVRLLIALVKKESAEWAIEFTHEAIELHGGNGYIEDFVLPRLL 419

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-L 493
           R++   ++  G+ N +  +++ L++K  N    L   L+Q      +++ +++    +  
Sbjct: 420 RDAQVLTVWEGTANILAHELIRLVQK--NAHITLLHELQQTSHPYLQQLASVVEQRFAVF 477

Query: 494 CKEDKGL----ARFLTEKIALASSAAALYRAGMND------IADVFLENRFLDNCHSTHC 543
              D  +    A+ L +++A    A    +   +       +A++++E +F         
Sbjct: 478 VTLDPAMQTLEAKPLMQQLARLYEAVVAVKHAESAGEREQMLAEIYIEEQFDQ---KPFG 534

Query: 544 MLHGRFNAAHIIDSLY 559
            +        +++S Y
Sbjct: 535 EVPLAVKGFKLLNSGY 550


>gi|317404354|gb|EFV84778.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 392

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 142/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 11  GEDLDMLRDAVRTFAQAE-IAPRAAEVDRSDQFPM--DLWRKFGDLGVLGMTASEEYGGA 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    TP     + PK+ S E+   
Sbjct: 68  NMGYLAHMVAMEEISRASASIGLSYGAHSNLCVNQINRNGTPAQKAKYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADTLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPEAHQRGITAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V+ +   +  + A++S   V  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVKVLMSGLDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  +++  + D  +  +E     R        +  + A  +  E ++ +GG+G
Sbjct: 295 TTLQASRAFCYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 353 YINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|290462331|gb|ADD24213.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Lepeophtheirus salmonis]
          Length = 408

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 78/384 (20%), Positives = 155/384 (40%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  DK   +P     ++     GL        +             A  Y +A  E 
Sbjct: 49  PKAKLIDKEHRYPE--ECVKAMGELGLMAINTPEEYGGSGLG-------AMEYAIAMEEI 99

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +++ V L     ++ D   K  + E       P+   +     GLTE   G
Sbjct: 100 SRGC-----ASNGVILSAHNSLYLDPINKNGTHEQKEKYVTPLTDGNQIGCFGLTEPGNG 154

Query: 209 TDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  A ++  +   DG  Y L+G K W  ++P +   ++ A    ++    +   +   S
Sbjct: 155 SDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKGITAFIVPKS 214

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + ++K+G R ++T  +   +    ++   NV  G     KI +  LD   + V
Sbjct: 215 IPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGFKIAMQTLDGGRIGV 271

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +A+     A+ YA +R   G  +    +++  IAD+A+ + A+  L +R A + 
Sbjct: 272 AAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRVEASRLLLYRAAAAK 331

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAA        TK +  + A  V+ ++++ +GG G++ +    R+YR++   
Sbjct: 332 DTGMPYTKEAAM-------TKLFASETATWVVHQSIQVLGGMGFVTDMPSERNYRDARIT 384

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            I  G+     + + + + K   L
Sbjct: 385 EIYEGTSEIQRIVIASNIMKEYGL 408


>gi|316932503|ref|YP_004107485.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600217|gb|ADU42752.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 593

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 108/530 (20%), Positives = 200/530 (37%), Gaps = 73/530 (13%)

Query: 40  DSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD-- 95
           D +L++L  N  + +   +     G+Y    TAQ L     + +  L      G++    
Sbjct: 8   DDILLSL--NHGAGLQAAVAAGHFGDYDGEITAQVLDEAGKFASDILAPLNRVGDKHGIK 65

Query: 96  ----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
               KV   P W    +R I  G +       F       A  + AA   + A       
Sbjct: 66  LEHGKVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPMA--VNAACTEIWASSNMAFG 123

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T +++ AL T  +  + + +  K+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTLSAIDALHTHGSDELKQIYLSKLVSGEWTGT-------------MQLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLV 258
           D+ A+ ++ ++   G Y + G K F++    D        +LA++         +  FLV
Sbjct: 171 DVGALRTRAERAEGGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L       G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     + 
Sbjct: 231 PKFLVGADGTLGARNDIYPSGVEHKLGIHASPTCTMTMGDNGGAIGYLIGEENRGMQCMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIAD 361
            M     L   +  V     +  +A+ YA+ R               +I  P +KR +  
Sbjct: 291 TMMNQARLAVGLEGVGIADRAYQQALAYAQERKQGRAIGSTGSGSDPIIKHPDVKRTLLT 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEA 415
           +     AA  + +  A + D A   ++       AA   ++ PI K +   +   V +  
Sbjct: 351 MRALTGAARTICYSTAVALDIAARSTDPKVKAAAAARGALLTPIAKAFSTDIGIEVASLG 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL- 472
           ++  GG G+IEE   A+HYR++    I  G+       L    L   G      L   L 
Sbjct: 411 VQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVTRKLGNNGGASVFALLDELK 470

Query: 473 ------EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
                 E             LR+++         +R+L +K+  A++ A 
Sbjct: 471 LIVKSVEASNDPGFGLTGLRLREALESLDRT---SRYLLDKLGSATNDAL 517


>gi|108757033|ref|YP_632158.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460913|gb|ABF86098.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 553

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 127/563 (22%), Positives = 214/563 (38%), Gaps = 54/563 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANY 79
             Q P  +G N Y  D+LL + +A          +  E   LGE +              
Sbjct: 3   FFQDPPRLG-NQYDDDALLQSYLARTLPEDLRRALTDEFRELGE-LGGDYFYRFQLRDRL 60

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +   G+R D +E  P W      +   GL  + +++    + R   H+     
Sbjct: 61  NEPELTQWDAWGQRVDHIEVSPLWKEAESLAARRGLVATAYEQKNAELSR--VHQFILNY 118

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L   +       ++ +  +A  +  +    +     P + SR+           T+   G
Sbjct: 119 LVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSRD---------PATAWTSG 169

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLV 258
             +TE+ GG+D+    +  ++  +G + LSG KWF S+  +   + LA+ EG   G   +
Sbjct: 170 QWMTERTGGSDVGLTQTVARQTPEG-WRLSGTKWFTSATTAQMALTLARPEGNGPGGKGL 228

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
                +     G  NG+   RLK+K+G R   T EL         +  L      +  M 
Sbjct: 229 ALFYVETRDAAGRLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWML 288

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +    +A+ S   MR +LA A  YA+RR   G  L D+P+    +A +  +  A   L+
Sbjct: 289 NVTRTWNAVGSAWAMRRALALARDYAQRRVQFGAKLADKPLHMDTLAGLEAEFQAGFLLA 348

Query: 374 FRLANSF--DEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           FR        EAK+ +E+    + +  P+ K    +    V +E  E  GG+GY+E+  I
Sbjct: 349 FRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGAGYVEDTGI 408

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK-------- 482
            R   ++   SI  G+ N + LD L  L K   L E  F  +E  LG +           
Sbjct: 409 PRIQADAQVLSIWEGTTNVLSLDTLRALAKEGAL-EAFFHEVEGRLGQTRDAGLRPCVDA 467

Query: 483 -------VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
                      +  ++      +  AR  +  +      A L           +     L
Sbjct: 468 AQGALEHARAWVAGAMEDPATLEAGARRFSLTLGRTLELALLCAHA------QWC----L 517

Query: 536 DNCHSTHCMLHGRFNAAHIIDSL 558
           D+ H        R  A+H +D +
Sbjct: 518 DHGHGPRSKAAARRFASHGVDLI 540


>gi|17988840|ref|NP_541473.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|17984662|gb|AAL53737.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 617

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/572 (19%), Positives = 197/572 (34%), Gaps = 74/572 (12%)

Query: 9   RLAMNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67
           R++M     P  D+ F LN    +   N       L       P VV   L   G  +  
Sbjct: 18  RISMPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAE 70

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            T   + + A+            G     V     +          G         +   
Sbjct: 71  GTLFPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQ 123

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDP 185
                + +  A    M+       M P +T  ++ A+    T      + PK+    +  
Sbjct: 124 GLP--YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTG 181

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--- 242
           T             + LTE   GTD+  + +     +DG Y +SG K F+S+   D    
Sbjct: 182 T-------------MNLTEPHCGTDLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSEN 228

Query: 243 --FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  +
Sbjct: 229 IIHLVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVM 288

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
            +    G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R       
Sbjct: 289 NYDEATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALS 348

Query: 348 ----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------ 391
                      +I  P ++R + +I     A  AL   +A   D A    +EA       
Sbjct: 349 GAVAPEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADD 408

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     
Sbjct: 409 LVGLLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQA 468

Query: 452 LDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           LD++   L   G       F  + +  +     +K+    +       + +    +L + 
Sbjct: 469 LDLVGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQN 528

Query: 508 IAL----ASSAAALYRAGMNDIADVFLENRFL 535
                  A +A+  Y      +A  ++  R  
Sbjct: 529 AMAKPDNAGAASNDYMHLFGLVALGYMWARMA 560


>gi|225628887|ref|ZP_03786921.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254706042|ref|ZP_05167870.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254711660|ref|ZP_05173471.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254712274|ref|ZP_05174085.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715345|ref|ZP_05177156.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256029706|ref|ZP_05443320.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256157859|ref|ZP_05455777.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256253180|ref|ZP_05458716.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167205|ref|ZP_05754016.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261217074|ref|ZP_05931355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261220286|ref|ZP_05934567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261313479|ref|ZP_05952676.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261319284|ref|ZP_05958481.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261319944|ref|ZP_05959141.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261756609|ref|ZP_06000318.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986717|ref|ZP_06099274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265996367|ref|ZP_06108924.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|225616733|gb|EEH13781.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|260918870|gb|EEX85523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260922163|gb|EEX88731.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292634|gb|EEX96130.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261298507|gb|EEY02004.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261302505|gb|EEY06002.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736593|gb|EEY24589.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|262550664|gb|EEZ06825.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264658914|gb|EEZ29175.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 375

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGYMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|194014442|ref|ZP_03053059.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Bacillus pumilus ATCC 7061]
 gi|194013468|gb|EDW23033.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa
           dehydrogenase) [Bacillus pumilus ATCC 7061]
          Length = 380

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 132/375 (35%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    PA     ++    GL    +   +        ++ +    +       
Sbjct: 26  PLAQTIDEQAVFPA--QTFQKMGELGLMGIPFPEKYGGSGGDTISYALAVEEIGKQCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T     D    + S              +     GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEEQKMDHLVPLASG-------------TALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D     ++  K            W  ++  +   I+ A  +    G  ++   + +  
Sbjct: 131 GSDAKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTAVSDHDEHGRPIISAFIVEKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL      +K+G R + T E+   N       +LGD N              +  A +
Sbjct: 191 QKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHILGDPNKGFKQFLYTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L  ++ YA+ R   G  L     ++  +AD+A+ I  A  + ++ A   D  
Sbjct: 251 SVGIAQAALDASLSYAKERKQFGQTLSSFQAIQFKLADMAMQIELARQMVWKAAWLKDHG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  ++EAAYA       K +  +MA     +A++  GG+GY++E  + R  R++    I 
Sbjct: 311 KPFTKEAAYA-------KLFASEMATKASLDAVQIHGGTGYMKECGVERLVRDAKLMEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 364 EGTSEIQRLVIARQL 378


>gi|295697789|ref|YP_003591027.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295413391|gb|ADG07883.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 147/398 (36%), Gaps = 34/398 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   QE+         ++    P   + D+ +  P    +++     G         + 
Sbjct: 5   LTEEQQEIRDAVRRFAEEVIR--PRAPQIDEEDRFP--RDIIQNMADLGFLGIPIPEEWG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            V     ++ +    +  ++   A  L   +   A  V    +      +   + S    
Sbjct: 61  GVGADFVSYVLAIEEVAKVSATVAVILAVHTSLGALSVLYHGSEDQKDKYLRGLASG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                      +     LTE + G+D AAIT++ ++   G        +  +   +D ++
Sbjct: 118 ----------RLLGAFALTEPQAGSDAAAITTRARREPGGYRIDGQKVFITNGGEADLYL 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A +    G   +   L +    GL   + + K+G   +AT EL F +        L  
Sbjct: 168 IFANLNPEAGRRGITAFLVEADNQGLIIGKKERKMGLNGSATTELIFEDCRVPESARLG- 226

Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358
             G  E  ++ +  LD   + ++   + +AE     A  Y + R   G  + D   ++  
Sbjct: 227 --GEGEGYRVAMSLLDGGRIGIAAQALGIAEGALELARAYVKERQQFGRRIGDFQGVQFI 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD A +I AA  L +R A    +    ++EAA A       K +    A  V  +A++ 
Sbjct: 285 LADRAAEIEAARLLVYRAATMRAKGLPCAKEAAMA-------KLYASDTAMRVTVDAVQL 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG GYI++  + R+ R++    I  G+     + V  
Sbjct: 338 HGGYGYIKDYGVERYMRDAKVTQIYEGTNQIQRMVVAK 375


>gi|207727717|ref|YP_002256111.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590958|emb|CAQ56570.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 393

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 141/396 (35%), Gaps = 24/396 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q     P  E  D+ +  P  AW  +    +   L  ++ +    
Sbjct: 12  GEDIEMLRSAVRDWAQAE-LAPRAEAIDRSDQFPMDAWKQMGDLGV---LGITVAEEYGG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH I    +   +        + S    + +    TP     + PK+ S E+  
Sbjct: 68  ANMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKAKYLPKLVSGEW-- 125

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + ++  D         W  + P  D  ++
Sbjct: 126 -----------VGALAMSEPNAGSDVVSMKLRAERRGDRYVLNGTKMWITNGPDCDVLVV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             + E  +G   +   + +    G    +  +K+G R + T EL F N    +   L   
Sbjct: 175 YGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPVENVLGEE 234

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G    +   +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD+
Sbjct: 235 NGGTRVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A  A  + +  + D      E     R        +  + A  +  EA++ +GG+
Sbjct: 295 YTTLQACRAYLYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGN 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R +R++    I  G+     + +   L
Sbjct: 353 GYINEFPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|330790553|ref|XP_003283361.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum]
 gi|325086786|gb|EGC40171.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum]
          Length = 419

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 17/289 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           +  E        +   +      L+E   G+D  ++ ++  K  DG + L+G K ++++ 
Sbjct: 137 YGNEEQKKKYLSLLAKNTVGSFCLSESGSGSDAFSLATRATKQPDGTFVLNGTKQWITNA 196

Query: 239 -MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +  FI++A V+   G   +   + + S  GL   + ++K+G R+++T E+   N    
Sbjct: 197 KEAGVFIVMANVDPSQGYKGITAFIVESSNPGLKIGKKEDKLGIRASSTCEVILDNCVVS 256

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
               L       +  KI I  L+   + ++   + LAE +      Y   R   G  + +
Sbjct: 257 SDSILGQLG---KGYKIAIEGLNEGRIGIAAQMLGLAEGVFESTIPYLMERKQFGKPIAE 313

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              M+   AD+A+DI AA  L++  A   +       +A+ A       K +  ++A   
Sbjct: 314 FQGMQFTYADLAIDIEAAKLLTYNAARMQEAGLPFVHQASMA-------KLYASRVAEKT 366

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  +  +GG G+ +E    + +R+S    I  G+ N  +  V   + K
Sbjct: 367 ASACISMLGGVGFTKEFPAEKFFRDSKVGQIYEGTTNIQLQVVAKSILK 415


>gi|326919882|ref|XP_003206206.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 465

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 129/379 (34%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P  ++ D+           ++    G+        +         H +    +   
Sbjct: 101 EHLAPKAQQIDQENEFKGMREFWKKLGELGVLGITAPVEYGGSALGYLDHVLVMEEVSRA 160

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S E+                L ++
Sbjct: 161 SAAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEH-------------IGALAMS 207

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  +  K  D         W  + P +D  I+ A+ +         +   
Sbjct: 208 EPNAGSDVVSMKLKADKKGDYYVLNGNKFWITNGPDADVLIVYAKTDLNAVPASQGITAF 267

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + +    G    +  +K+G R + T EL F +        L   +  V  +   + L+  
Sbjct: 268 IVEKGMPGFSTAQKLDKLGMRGSNTCELIFEDCKIPAENILGKLSKGVYVLMSGLDLERL 327

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S   +  M+  L  AI Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 328 VLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMYTRLMACRQYVYNVAK 387

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+    +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 388 ACDQGHFNAKD-------CAGVILFSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAK 440

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 441 LYEIGAGTSEVRRLVIGRA 459


>gi|322705809|gb|EFY97392.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 447

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E   A  +++++    GL        +          I        A    
Sbjct: 90  PKARDMDEAEDMDA--SVVQQLFEQGLMGVEIPEEYGGAGMNFTSAIIGIEELARADPSV 147

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  +   +   +  + K W PK+               T+      L+E   
Sbjct: 148 SVLVDVHNTLCNTAVIKYGSEALKKKWLPKL--------------ATNTVASFCLSEPVS 193

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++ ++ +DG     G  W  +S  ++ FI+ A ++   G   +   + +   
Sbjct: 194 GSDAFALATRAEETADGFKINGGKMWITNSKEAEFFIVFANLDPSKGYRGITAFVVEKGT 253

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    + + K+G R+++T  L F +    ++   N+     +  K  I  L+   + ++
Sbjct: 254 PGFSIAKKEKKLGIRASSTCVLSFDDV---VVPKENILGERGQGYKYAISLLNEGRIGIA 310

Query: 327 GMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                LA      A+ Y    R   G ++ +   M+  IA    +IAAA AL +  A   
Sbjct: 311 AQMTGLALGSFENAVKYVWNDRKQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKK 370

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+S   
Sbjct: 371 EAGEDFVKDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIG 423

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+ N  +  +  LL+K
Sbjct: 424 AIYEGTSNIQLNTIAKLLQK 443


>gi|94501688|ref|ZP_01308203.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94426175|gb|EAT11168.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 601

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 85/483 (17%), Positives = 165/483 (34%), Gaps = 70/483 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGG-------ERWDKVEFHPAWHALLRRSIHDGLH 116
            ++     E A+        L      G            V     +    ++ +  G  
Sbjct: 38  DMVEAIINEGAKFCEN---VLAPLNRVGDEEGCTRHEDGSVTTPTGFKEAYQQFVEGGWP 94

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
               +  +      ++     + +   +    G     S  + + +A   T    + +  
Sbjct: 95  SLAHEEQYGGQGLPESLGTVMSEMVGTSNWSWGMYPGLSHGAMNTLASWGTDEQKETYLT 154

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE   G+D+  + ++ +  +DG Y +SG K F+S
Sbjct: 155 KLVSGEWTGT-------------MCLTEPHCGSDLGILKTKAEPNADGSYSISGTKIFIS 201

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLL--EDG---SPNGLCYQRLKNKIG 280
           +   D       I+LA++ G       +  F+VP+    EDG     N +    +++K+G
Sbjct: 202 AGEHDMAENIVHIVLARLPGAPEGTKGISLFIVPKFNVAEDGSVADRNAVVCGSIEHKMG 261

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              NAT  + F    G+L+G  N     +        + +A+   +    S   A+ YA+
Sbjct: 262 IHGNATCVMNFDGAKGYLIGPENKGLNCMFTFMNTARIGTALQGATAAEGSYQGALAYAK 321

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------E 382
            R                  +I  P ++R +           AL +  A   D       
Sbjct: 322 DRLAMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRALVYLAAQQNDIVHKGES 381

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            + R         + PI K +  ++        ++  GG G+I E  + +  R++  ++I
Sbjct: 382 EEERKAADELLGFLTPIAKAFLTEVGCEATNLGVQVFGGHGFIAEWGMEQLVRDAKISTI 441

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             G+     LD+L                +    G S K    I+       + ++ LA 
Sbjct: 442 YEGTTGIQALDLLG-------------RKVLMSQGQSLKNFTKIVHKFCQAEEGNEELAP 488

Query: 503 FLT 505
           F+T
Sbjct: 489 FIT 491


>gi|254428436|ref|ZP_05042143.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194605|gb|EDX89564.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 387

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 147/403 (36%), Gaps = 33/403 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
                  R +  +  Q     P     D+    P    + ++    G+        +   
Sbjct: 11  DETLVALRDSVRHFAQ-KEIAPIAAEVDQSNQFPL--EMWKKLGDLGVLGVTVSEEYGGA 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + + L  T    + + PK+ S ++   
Sbjct: 68  NMGYLAHTLVMEEISRASASIGLSYGAHSNLCVNQIYLNGTDAQREKYLPKLVSGDH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P +  +++ 
Sbjct: 125 ----------IGALAMSEPGAGSDVVSMGLRADKQGDHYVLNGNKMWITNGPDAHTYVIY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + +    G    +  +K+G R + T EL F +       + NV  
Sbjct: 175 AKTDTSAGPRGITAFIVERGFAGFSQAQKLDKLGMRGSNTCELVFEDCHVP---EENVLG 231

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIA 360
              E +K+L+  LD     +SG    + +A       Y   R   G  + +  +M+  IA
Sbjct: 232 TVGEGVKVLMSGLDYERTVLSGGATGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + + A+ +  + +A + D  ++  ++AA           +C + A  +  EA++ +G
Sbjct: 292 DMYVMLNASRSYLYNVAKACDRGETNRKDAAG-------VILYCAENATKMALEAIQTLG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G+GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 345 GNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 387


>gi|195326049|ref|XP_002029743.1| GM24928 [Drosophila sechellia]
 gi|194118686|gb|EDW40729.1| GM24928 [Drosophila sechellia]
          Length = 420

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 151/431 (35%), Gaps = 37/431 (8%)

Query: 38  SSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
             D  L     +A++P        + G        +E+A   N+   +L    P  +  D
Sbjct: 16  RGDRPLSWTRTLAHYPVND----AMFGLDEDRQKLREVAF--NFFQKELA---PLAKEID 66

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           K++         ++    G      +  F         H I        A   A    + 
Sbjct: 67  KLDNFKDMRPFWKKLGDLGFLGITAEPDFGGTGGNYLDHCIIMEEFSRAAGGVALSYGAH 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    TP   + + PK+ S E+               GL ++E   G+D+ ++
Sbjct: 127 SNLCINQLTKNGTPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSM 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCY 272
             + ++  D         W  +   +D  I+ A+  G        +   + + +  G   
Sbjct: 174 KLRAERKGDYYILNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWEGFSV 233

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +  +K+G R ++T EL F +       +LG  N     +        L  A   V  M+
Sbjct: 234 AQKLDKMGMRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQ 293

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D      ++
Sbjct: 294 AACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKD 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                        +  + A  V  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 354 -------CAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEI 406

Query: 450 MVLDVLNLLEK 460
               +   L +
Sbjct: 407 RRWLIGRQLNQ 417


>gi|195157174|ref|XP_002019471.1| GL12205 [Drosophila persimilis]
 gi|198454807|ref|XP_001359731.2| Arc42 [Drosophila pseudoobscura pseudoobscura]
 gi|194116062|gb|EDW38105.1| GL12205 [Drosophila persimilis]
 gi|198132962|gb|EAL28883.2| Arc42 [Drosophila pseudoobscura pseudoobscura]
          Length = 405

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 140/380 (36%), Gaps = 32/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P   ++D+   +PA    +++    G+                     A          
Sbjct: 47  SPNAAKFDREHLYPA--QQIKQMGELGVMSVAIPEELGGTGLDYLAYAIAMEEISRGCAS 104

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG +MS + +      L        + +     + E                   L+E  
Sbjct: 105 AGVIMSVNNSLYLGPLLGFGNAAQKEAFITPYTTGE-------------RVGCFALSEPG 151

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A ++   +  D         W  +   + A ++ A    ++    +   +    
Sbjct: 152 NGSDAGAASTVATEKGDHYVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISAFIVPKG 211

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G R ++T +L F +        L     P    KI +  LD+  + +
Sbjct: 212 LKGFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLG---EPGFGFKIAMQTLDAGRIGI 268

Query: 326 SGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +G      + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   
Sbjct: 269 AGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAMESARLLTWRAAWLK 328

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++ ++EAA A++ A      C         + ++ +GG GY+ +    RHYR++   
Sbjct: 329 DNKQAYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVADMPAERHYRDARIT 381

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   + K
Sbjct: 382 EIYEGTSEIQRLVIAGSILK 401


>gi|167031414|ref|YP_001666645.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857902|gb|ABY96309.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 601

 Score =  272 bits (697), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 87/489 (17%), Positives = 182/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    + A   + +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLSPLNRVGDQEGCTWSESGVKTPTGFKAAYEQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   +    G     S  + + ++   T    + +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLALSEMVGGSNWSWGMYPGLSHGAMNTISAHGTHEQQETYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  NG+    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEER 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +      G + +    + ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGNEAVKEFVEPLAAINKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|109080651|ref|XP_001096354.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 423

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 125/379 (32%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDCSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCVNQLVRNGNEAQKEKYLPKLTSGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNSGSDVVSMKLKAEKKGDHYVLNGNKSWITNGPDADVLIVYAKTDLAATPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSDTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|85375184|ref|YP_459246.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788267|gb|ABC64449.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 388

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 154/403 (38%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE       +  AR A+     L       E+ D+ ++ P    L R+    GLH   
Sbjct: 10  QLGESA-DMIRESTARFADEQIALL------AEKVDREDWFP--RDLWRQMGELGLHGIT 60

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +     +      H I    +   +        + S    + +           + P +
Sbjct: 61  VEEEHGGLGLGYLEHVIAVEEISRASASVGLSYGAHSNLCLNQIRRWGNDEQKAKYLPGL 120

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  + + +  G        W  ++P
Sbjct: 121 ISGEH-------------VGSLAMSEAAAGSDVVSMKLKAEAVQGGYVLNGTKFWITNAP 167

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
            +D  ++ A+ +G  G   +   L +    G    +   K+G R + T EL F +     
Sbjct: 168 EADTLVVYAKTDGSAGSRGITAFLVEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPE 227

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             ++G +N   G +        +  A + +  M+  L   I Y R R   G  +    +M
Sbjct: 228 DRVMGPVNGGVGVLMSGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLM 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + +A A ++ +A S D  K+   +AA A ++A        + A  V AE+
Sbjct: 288 QAKVADMYVSLQSARAYTYAVAKSCDAEKTTRFDAAGAILLA-------SENAFRVAAES 340

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GY  +  + R+ R++    I  G+     + +   L
Sbjct: 341 VQALGGAGYTLDWPVERYMRDAKLLDIGAGTNEIRRMLIGREL 383


>gi|239994915|ref|ZP_04715439.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 342

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 137/360 (38%), Gaps = 30/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           +  +    GL        +    +   AH I    +   +        + S    + +  
Sbjct: 1   MWTKLGDMGLLGVTVSEQYGGSDMGYLAHTIAMEEVSRASGGIGLSYGAHSNLCVNQIFK 60

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + PK+ S E+                L ++E   G+D+ ++  + +K  D 
Sbjct: 61  NGNDAQREKYLPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLKAEKRGDK 107

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  + P +  F++ A+ +   G   +   + +    G    +  +K+G RS+
Sbjct: 108 YILNGNKMWITNGPDAHTFVIYAKTDPNAGPRGITAFIVERDFPGFSRAQKLDKLGMRSS 167

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHY 338
            T EL F +         N+     E +++L+  LD   + +SG     M+  +   + Y
Sbjct: 168 NTCELVFEDCEVPA---ENILGKEGEGVRVLMSGLDYERLVLSGGPLGIMQSCMDIVVPY 224

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +    +++  +AD+   + AA A  + +A S D  ++  ++AA A     
Sbjct: 225 IHDRQQFGQSIGQFQLVQGKVADMYTQMNAARAYVYTVAQSCDRGETTRKDAAGA----- 279

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  ++A  +  +A++ +GG+GYI E    R  R++    I  G+     + +   L
Sbjct: 280 --ILYSAELATKMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 337


>gi|94312720|ref|YP_585929.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93356572|gb|ABF10660.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 596

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 127/522 (24%), Positives = 214/522 (40%), Gaps = 31/522 (5%)

Query: 17  QPSDSLFALNQ-PPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTA 70
           +P+ S  +     P   G++  + D  L  ++  +      + +   LE +G+       
Sbjct: 14  RPARSHQSSQHLAPDCAGLDFLALDRGLQDMLRLYLPADAHAHLLPHLERMGKLAGGR-L 72

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVR 129
             LA +A+ + P LH     GE  D +E+HPA+  +   +  D   H             
Sbjct: 73  NTLAIVADKHAPVLHVRTRWGEDADWIEYHPAYQEMEHIAFGDFQFHAMSHRGGVLGWKE 132

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSV--TSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 + A  YL  Q E G +   SV  TS  ++    +  + +   P++ S +     
Sbjct: 133 PLPAAAKYAFQYLFVQAEFGQMCPISVSDTSIHLIRKYGSAALQEKLLPRLLSSDPG--- 189

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                 T       +TEK GG+D+ AI +   +  DG + L G KWF S   +D  ++LA
Sbjct: 190 ------TMWKGTQFMTEKAGGSDVGAIETVA-REEDGEWRLYGEKWFCSHTDADIALLLA 242

Query: 248 QVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           + EG       +  F +PR L+DGS N     RLK+K+G RS A+ E+       +L+GD
Sbjct: 243 RPEGAVDGTRGLALFALPRTLDDGSRNAYRIVRLKDKLGTRSMASGEIRLDGAVAYLVGD 302

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +   L  L  A+ + + MR  L EA+  AR R   G  ++   +++R +  
Sbjct: 303 PTQGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALVAARHRRAFGREVVGHALLRRQLLK 362

Query: 362 IALDIAAATALSFRLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + +   AA ++    A+      K     A   R++ P+ K   C+    V   AME  G
Sbjct: 363 VMVPTEAALSMVMATADIMARAGKGDKTAALALRLLTPLLKLRTCRDNIEVATGAMEVRG 422

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GYIE+   AR  R++    +  G+ N   LD +    +       L + +   L  + 
Sbjct: 423 GNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIQRAVRKDGAQHALLALMSARLEQAT 482

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALAS----SAAALY 518
                +             LA  +    AL +    +A+ALY
Sbjct: 483 HLPADLRAVLQRSLSRAIALAETVAGDAALEAEVRRAASALY 524


>gi|29833142|ref|NP_827776.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610264|dbj|BAC74311.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 383

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 136/388 (35%), Gaps = 37/388 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
                P + A+    E  D+        +L+++    G      D  +        H   
Sbjct: 21  DREVAPNVIAWDR-AEEVDR--------SLVKKLGEVGFLGLTVDEEYGGSGGD--HLAY 69

Query: 137 AARLYLMAQLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                 + + ++      SV+    A  +A   +    + W P + S             
Sbjct: 70  CLVTEELGRGDSSVRGIVSVSLGLVAKTIAYWGSEEQKRQWLPGLTSG------------ 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
            +     GLTE   G+D   +T++  +  D         +  +   +D  ++ A+     
Sbjct: 118 -AYVGCFGLTEPGTGSDAGNLTTRAVRDGDDYVVNGTKMFITNGTWADVVLLFARSTDAP 176

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDM 312
           G   V   L      GL  + +  K+G R  AT EL   +        L     G    M
Sbjct: 177 GHKGVSAFLVPTDTPGLTRRPIHGKLGLRGQATAELVLEDVRVPASAMLAPEGKGFSVAM 236

Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L    +  A   V   + +L  A+ YA  R   G  +    +++  I+DIA+D+ AA 
Sbjct: 237 SALAKGRMSVAAGCVGIAQAALDVAVKYATEREQFGKTIAHHQLVQELISDIAVDVDAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R+A+  D  +  +  +          K +  + A      A++  GG GYI+E   
Sbjct: 297 LLTWRVADLVDRGQPFATAS-------SQAKLFASEAAVRAANNALQVFGGYGYIDEYPA 349

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  R++   ++  G+     L +   L
Sbjct: 350 GKLLRDARVMTLYEGTSQIQKLLIGRAL 377


>gi|115524393|ref|YP_781304.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518340|gb|ABJ06324.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 382

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 148/399 (37%), Gaps = 34/399 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +   A+E A              P   +WD+ +  P    ++R++   G+       
Sbjct: 10  QRAVRDMAREFAAE---------KIAPHALKWDEDKHLPL--DVIRQAASLGIGGIYIRD 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +                    +S    +A M+    +    + W PK+ S E
Sbjct: 59  DVGGSAMTRFDAALIFEALATGCPAVSAFISIHNMAAWMIDSYGSEAQRQRWLPKLCSME 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +     LTE   G+D AA+ ++     D  Y L+G K F+S   ++ 
Sbjct: 119 -------------LIASYCLTEPGSGSDAAALRTRAVIDGDH-YVLNGQKQFISGAGAND 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
             ++    G  G   +  L+ +    GL +   + K+G  +  T  + F +    +   L
Sbjct: 165 LYVVMVRTGAEGAGGISTLVVERDTPGLSFGANERKMGWNAQPTRAVMFEDARVPVQNRL 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD  +             L+ A  S+ G + +L +++ Y R R   G  L +   ++  +
Sbjct: 225 GDEGIGFKIAMAGLDGGRLNIAACSLGGAQSALDKSLDYTRERKAFGRRLDEFQALQFKL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA    +R A + D           A ++  + K +   +   V  +A++  
Sbjct: 285 ADMATELEAARTFVWRAAAALDRKDHD------ASMLCAMAKRFGTDIGFQVANDALQLH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  I +  R+   + IL G+   M + V   L
Sbjct: 339 GGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRMIVARKL 377


>gi|297180334|gb|ADI16552.1| acyl-CoA dehydrogenases [uncultured bacterium HF4000_009C18]
          Length = 589

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/415 (20%), Positives = 170/415 (40%), Gaps = 49/415 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    ++ I DG      D  +      +        +   A L        S+
Sbjct: 72  VITPPGYKGAYKKFIQDGWTSLSCDPEYGGQGIPKTISAFFDEMLSSASLSFKLYSELSI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + + +       + K + PKI   ++  T             + LTE   GTD+  + +
Sbjct: 132 GAYNCILHHGANTIKKKFLPKIVEGKWSGT-------------MCLTEPVCGTDLGLLKT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED- 264
           +  + SDG + LSG K F++S   D       ++LA+          +  FLVP++    
Sbjct: 179 KATEQSDGSFKLSGQKIFITSGDHDLTENIIHLVLARTSDAPSGTKGISLFLVPKVQVKE 238

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+    +++K+G + ++T  L F    G+++G  N     +  M  L  +  
Sbjct: 239 DGSLGPRNGVSTGSIESKMGIKGSSTCVLNFDEAIGYMIGSKNKGLSSMFTMMNLERIVV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAA 369
            I ++    ++   A++Y++ R   G            ++ID   ++R++  +   I   
Sbjct: 299 GIQALGISEIAYQNALNYSKERKQ-GKSNNSKTANGADLIIDHADIRRSLLSMKSIIEGE 357

Query: 370 TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ALSF LA   +      + K + E +    +M P+ K     M   + ++AM+  GG G
Sbjct: 358 RALSFWLAQQIEVSLHHSDNKIKQEASDLVSLMTPVVKSLFTDMGMEITSDAMQIFGGYG 417

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
           Y +++ I + YR++    I  G+ +A    L    L+ K  ++ ++    +E+++
Sbjct: 418 YTKDQGIEQLYRDNRITPIYEGTNSAQSIDLVFRKLINKDGSVIDRYIKFIEEEI 472


>gi|254392883|ref|ZP_05008051.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326440112|ref|ZP_08214846.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197706538|gb|EDY52350.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 393

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 124/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   F    +     ++       A+L  G   S    +   +A   +     +W P +
Sbjct: 63  PYATEFGGGEQPYEVYLQVLEELAAARLTVGLGASVHTLACHALAGYGSKEQQAEWLPDM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  +         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPAAGSDAASLRTRAVRDGEDWVITGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           ++D + +LA+  G  G   +   L  G   GL     + K+G + + T +L F       
Sbjct: 170 VADFYTVLARSGGE-GSRGITAFLVPGDAPGLTAAAPEKKMGMKGSPTAQLHFDGVRVPD 228

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+                L  A  +V   + +L EA+ YA  R   G  + D   +
Sbjct: 229 TRRIGEEGQGFTIALSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  +L    A   D+    S EAA A       K +C   A +V  +A
Sbjct: 289 RFLLADMATRIEAGRSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +  + R  RE+    I+ G+     + V   L
Sbjct: 342 VQVLGGYGYTADFPVERLMREAKVLQIVEGTNQIQRMVVARHL 384


>gi|294853739|ref|ZP_06794411.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819394|gb|EFG36394.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 375

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTKDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|146340123|ref|YP_001205171.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192929|emb|CAL76936.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 381

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 143/377 (37%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   RWD+ +  P    ++R +   G+               +             
Sbjct: 22  EKIAPHALRWDEDKHFPV--DVMREAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+    T    +++ PK+           PM    +     LTE
Sbjct: 80  CPTVSAFISIHNMASWMIDTFGTEAQRQEYLPKLC----------PM---DLIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  +  D  Y ++G K F+S   +   ++     G  G   +  L+ D
Sbjct: 127 PGAGSDAAALRTRAVRDGDD-YVINGQKQFISGAGATDILVAMVRTGADGPGGISTLVID 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T  + F N    +   LG+  +             L+ A
Sbjct: 186 AKTPGVSFGANERKMGWNAQPTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L + + Y R R   G  L +   ++  IAD+A+++ AA    +R A + D
Sbjct: 246 ACSLGGAQAALDKTLAYTRERKAFGKRLDEFQALQFRIADMAIELEAARTFLWRAAAALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A ++  + K +   +   V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 306 HKD------ADATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 360 ILEGTNEIMRLIVSRKL 376


>gi|296163804|ref|ZP_06846494.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295885951|gb|EFG65879.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 566

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 92/459 (20%), Positives = 185/459 (40%), Gaps = 62/459 (13%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWD 121
              +E A++ +     L      G+R      D V    P +    R+    G       
Sbjct: 30  AVLEESAKLCSE---VLAPLNVEGDRNPSSWKDGVVTATPGFREAFRQFGEGGWQGVQHP 86

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIF 179
             ++     +   I  A + ++        + P +T  ++ AL+T  +    + + PK+ 
Sbjct: 87  LDYDGQGLPK--LIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPKLI 144

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE + G+D+A + ++ +   DG + L G K F++   
Sbjct: 145 SGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGE 191

Query: 240 SDA-----FIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA+          +  F+VP+ L +     G  N +    +++K+G ++
Sbjct: 192 HDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSLGERNDVHCVSIEHKLGIKA 251

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  L+F +     G L+G+ N     +  M         +  +     +  +A+ YA+
Sbjct: 252 SPTAVLQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAK 311

Query: 341 RRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            R  S            +I  P ++R +A +     A+ AL++  A   D A   ++EA 
Sbjct: 312 DRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEAT 371

Query: 392 YARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            A   A      PI K W  +++  V +  ++  GG G+IEE   A++YR++    I  G
Sbjct: 372 RAEHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEG 431

Query: 446 SGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKK 482
           +      D++    +  G  + + L + + + + + G +
Sbjct: 432 TTAIQANDLIGRKTVRDGGKIAKSLLAGVAETIEALGAQ 470


>gi|221633320|ref|YP_002522545.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221156735|gb|ACM05862.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 408

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 158/415 (38%), Gaps = 29/415 (6%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
                +    E   ++ L+   +EL   A      +    P    +D+ E HP  H L+ 
Sbjct: 5   TGGGAMLASREASVDFSLTAEQRELQERARRFAETVVK--PVATYYDQEERHP--HELIV 60

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           R+  +GL      R +          +  A     A          S  +   + +  + 
Sbjct: 61  RARAEGLTEITIPREYGGRGLGVLELVLVAEQLAWACAGFTAAACSSCLAGEPIVIAGSE 120

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P++ + EY                  LTE   G+D+AA+ ++ ++  D     
Sbjct: 121 EQKRRWLPRLAAGEY--------------ASFALTEPDAGSDVAALATRAERCGDVYVLN 166

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W  ++P++  F++ A+ + + G   +   + +    G+   R   K+G R+ +  E
Sbjct: 167 GHKRWIGNAPIASFFVVFAKTDPQAGHNGISVFVVERESTGI-VTRPLRKLGQRAISNGE 225

Query: 289 LEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +EF +        +     G    M+ L       A      +R  L E++ YA++R   
Sbjct: 226 IEFHDVVVPANQRIGREGEGFAIAMQTLRRTRPMVAAFGAGIIRRCLDESLAYAQQRRTM 285

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +I    +   +AD+ + + AA  L++  A   D+ +  +  AA A+  A  +  W  
Sbjct: 286 GQPIIRHQAIGHKLADMQIRLEAARQLTYLAAWLADQGEDNTMAAAVAKAFAADSAMWA- 344

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                   EA++  GG+GY  +  + + +R++    I  G+       ++  L +
Sbjct: 345 ------ATEAVQVFGGNGYSPDYPVEKLFRDAKLLQIYEGTSEIQRNIIVRELVR 393


>gi|326402155|ref|YP_004282236.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325049016|dbj|BAJ79354.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 596

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 94/507 (18%), Positives = 182/507 (35%), Gaps = 67/507 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+++      L+      G  ++   V     +    R     G      
Sbjct: 36  ELIDSVLEEAAKISEEVLFPLNQVGDREGCTYENGVVRTPTGYREAYRTFCEGGWTSISA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  +          +    ++  A +  G     S  +   +    +    K W P I S
Sbjct: 96  DPDYGGQGMPLTAAMMVEEMFCSANVAFGLYPGLSHGAYVALKHSGSEEQKKAWLPNIVS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  + ++     DG Y ++G+K F+S+   
Sbjct: 156 GKWTGT-------------MCLTEPHCGTDLGMLRTKAVPNDDGTYSITGNKIFISAGEH 202

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ L       G  NG+    +++K+G   +
Sbjct: 203 DLAENIVHLVLARLPDAPAGVKGISMFLVPKFLPREDGTLGPRNGMQCTAIEHKMGLNGS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L   I  +    V+   A+ YAR R  
Sbjct: 263 ATCAMSFDGATGWLVGEPNKGLAAMFKMMNTERLSVGIQGLGIAEVAYQNAVAYARERIQ 322

Query: 345 ------------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSR 386
                           ++  P ++R +      I    AL+  +A         D+  ++
Sbjct: 323 GRSLTGTKAPEKQADPILVHPDVRRMLLTSRAYIEGCRALAGWVARELEILEKSDDGDAK 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A +M P+ K     +   + + A++  GG GYI +  I ++ R++    +  G+
Sbjct: 383 QAADDFASLMTPVVKAMFTDLGFEIASLAVQTYGGHGYIRDHGIEQYVRDARIAMLYEGT 442

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD++                L QD G    + +  + + I   +++  LA    E
Sbjct: 443 NGIQALDLVG-------------RKLPQDGGRLLTRFLDPVLEFIDAHQDNDALA----E 485

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
            +   S A    +     I +  + NR
Sbjct: 486 FLPALSQALEHVQEATGLIMEGAMTNR 512


>gi|161620515|ref|YP_001594401.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|163844613|ref|YP_001622268.1| hypothetical protein BSUIS_B0448 [Brucella suis ATCC 23445]
 gi|254702839|ref|ZP_05164667.1| hypothetical protein Bsuib36_02649 [Brucella suis bv. 3 str. 686]
 gi|260568249|ref|ZP_05838718.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261753440|ref|ZP_05997149.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|161337326|gb|ABX63630.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|163675336|gb|ABY39446.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|260154914|gb|EEW89995.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261743193|gb|EEY31119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 375

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 138/397 (34%), Gaps = 33/397 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  + R YR+     I  G+ +   L +   L
Sbjct: 339 YGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL 375


>gi|28210225|ref|NP_781169.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88]
 gi|28202661|gb|AAO35106.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88]
          Length = 379

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 147/377 (38%), Gaps = 40/377 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLM 152
           D+ +  P      ++    G+    + + +          + A      + A L   + +
Sbjct: 32  DENKEFPM--EAYKKLGEMGILGLPFPKEYGGTGGGYMSYVLAVEEISKVHASLGISYSV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + S+ S   +    +  + K + P +                       LTE   G+D A
Sbjct: 90  NASLCSG-AIYNNASEELKKKYLPDL-------------STGRKIGAFNLTEPEAGSDAA 135

Query: 213 AITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +    K  +  Y ++G K F  ++P++D F++    +   G   +   + +    G+ 
Sbjct: 136 NGSVTAIKEGNH-YIINGLKCFSTNAPVADTFVVFVITDKSKGPKGISAFIVEKDFPGIS 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++NK G  +    ++ + N       L+G+     G       L  LD   + V+  
Sbjct: 195 IGKVENKCGINAAQVSDVIYDNCKVPAENLIGEEGKGLGIG-----LSTLDGGRIGVAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +AE     A +Y + R   G  +     +   +A++A++I  A  L ++ A   DE 
Sbjct: 250 GLGIAEGAFEIAKNYMKERVQFGKPIYKNQYLGFKMAELAVEIEKARYLLYKAALDKDEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  S  AA A++        C  +A  V  EA++ +GG+GY+++ ++ R  R++    I 
Sbjct: 310 KPYSVSAAMAKLA-------CTDLAMKVTVEAVQMLGGNGYMKDYNVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 363 EGTNEIQKMIISGSIFR 379


>gi|329888447|ref|ZP_08267045.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847003|gb|EGF96565.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 593

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 94/516 (18%), Positives = 183/516 (35%), Gaps = 57/516 (11%)

Query: 59  ELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGL 115
             L   ++    +E  + A     P        G     D V     W     + +  G 
Sbjct: 30  ADLSRDLIDQIVEEGGKFAEEVIAPINRPGDLEGCHIEGDVVTTPKGWKEAYHQMVEAGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               +   F              +    A          +  +   +    +  + + + 
Sbjct: 90  PSLGFSTEFGGQGMPSVVSSAVGQFTAAASAAFSMYPGLTSGAFHGIEASASDEIKQKYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + GTD+  + ++  K  DG Y ++G K ++
Sbjct: 150 PKMASGEWTGT-------------MNLTEPQCGTDLGMVRTKAVKNDDGSYSITGQKIWI 196

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D        +LA+VEG       +  F+VP+ L +     G  NG+    L++K+
Sbjct: 197 SAGEHDFADNIIHTVLARVEGAVPGIKGLSLFVVPKFLVNEDGSLGERNGVSCAGLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + + N  G+L+G+       +  +     L + +  ++    +   A+ +A
Sbjct: 257 GIHGNATCVMAYENAKGWLIGEEGRGMNNMFVVMNEARLGTGLQGLAIGDAAYQAAVEFA 316

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
             R                  ++  P ++R + +    +    A     A   D  K+  
Sbjct: 317 NDRLQGRSLTGPKNPDGPADPIMVHPDVRRMLLEAKAFVEGGRAFILWTALQADLQKAAD 376

Query: 388 EEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           E  A     Y  ++ P+ K +       V + AM+  GGSGY E    +++ R++    I
Sbjct: 377 EAVATKAKDYMGLITPVLKAYLTDKGFHVASLAMQVHGGSGYTEHFPASQYLRDARITMI 436

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-KKVITILRDSISLCKEDKG 499
             G+     LD++   L   G       F+ ++  +  +G  + I    + ++  K+   
Sbjct: 437 YEGTNGIQALDLVGRKLPANGGRAIMSWFADIDAFVSENGDDEAIKPFVEGLADAKKKLQ 496

Query: 500 LARFLTEKIAL-----ASSAAALYRAGMNDIADVFL 530
            A     +  +     A++A+  Y       A  FL
Sbjct: 497 EATMWLMQNGMANPDNAAAASTDYLHIFGLTAYAFL 532


>gi|229490935|ref|ZP_04384770.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229322325|gb|EEN88111.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 411

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 137/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQ 145
           P  E+W++  +     W      +   G   +     F    V+   +            
Sbjct: 58  PNHEKWEEQNIVDRDVWVE----AGKQGFLGTAVPEEFGGGGVKDFRYNAIITEETTKGG 113

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                    +   A  +  +T     + W P   S E             +   + +TE 
Sbjct: 114 FSGIGFTLHNDVVAPYLLELTNEEQKQRWLPGFASGE-------------LISAIAMTEP 160

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G      L+ +
Sbjct: 161 GTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGFSLLVVE 219

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G    R  +KIG ++  T EL F++        L     G    MK L    L  A
Sbjct: 220 RDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNLPQERLSIA 279

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++ + M   L   I Y R R   G  +      +  +A++A +  A   L  +     +
Sbjct: 280 VVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELATETTAVRILVDKFIEQLN 339

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A+        W  +    +I   ++  GG GY++E  +A+ Y +S   +
Sbjct: 340 AEKLTVQEAAMAKW-------WTTEAQVKLIDRCLQLHGGYGYMKEYPVAKAYMDSRVQT 392

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 393 IYGGTTEIMKEIIGRSL 409


>gi|311031652|ref|ZP_07709742.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 379

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 137/378 (36%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG  + D+ +  P    + ++    G+    +   +E                  A    
Sbjct: 26  PGALQRDRDKKFPV--EVFQQLSQLGMMGLPFPEEYEGAGADTVSFAIVVEELSRACGST 83

Query: 149 GHLMSPSVTSASMVA-LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  V+       L  T    +++   I + E                  GLTE   
Sbjct: 84  GITYSAHVSLGGAPLNLFGTEEQKRNYLVPICTGE-------------SLGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGS 266
           G+D     +   +  +  Y ++G+K F+++      + L A  + +     +  ++    
Sbjct: 131 GSDAGGTQTTAVEDGED-YIINGNKCFITNASYAKHLALTAITDKKGNEKEISAVIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G        K+G  ++ T EL   +         N+     E  +  LI LD   + +
Sbjct: 190 AKGFQVIDNYEKMGLNASNTTELVLEDVRVP---QENLLGKRGEGFRQFLITLDGGRIGI 246

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M V +A+A     + Y++ R   G  L    + +  +AD+A+ +  A  + ++ A   
Sbjct: 247 GAMAVGIAQAAFERALAYSQERKQFGRSLSSFQINQFKLADMAMKLELARTMVYKAAWLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +  S+EA+         K +  ++   +  +A++  GG GY++E  + R  R+    
Sbjct: 307 DQGRPFSKEASM-------CKLYASEVCMEIADQAVQLHGGYGYMKEYHVERFMRDGKLL 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 EIGEGTSEVQRMVIARSL 377


>gi|328771128|gb|EGF81168.1| hypothetical protein BATDEDRAFT_36810 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 428

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 143/399 (35%), Gaps = 29/399 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +E   +A           P    WD+ E  P     L+++ + G         F 
Sbjct: 42  LSEETKEYQSVARAFAD--KELAPNMSHWDENEIFP--RDTLKKAANLGFSMVYCKDDFG 97

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
               K    +          +     ++   T + ++    +  + + + P +       
Sbjct: 98  GTGLKTLDSVVIFEALGTGCVSTSTYLTLHNTCSWIIDTYGSQALREKYLPVM------- 150

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
              APM          LTE   G+D A++ +   K  D  Y L+G K F+S    S+ ++
Sbjct: 151 ---APM---DQFGSYCLTEPNSGSDAASLLTTAVKKGD-SYILNGTKAFISGAGESEIYV 203

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +LA+  G  G   +   + +    GL + + + K+G  S+ T  +   +     G L+G 
Sbjct: 204 ILART-GGPGPKGISCFVVEKGTPGLSFGKKERKVGWNSSPTRAVILEDCAIPVGNLIGQ 262

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                        +  ++ A   + G + +L   + Y   R   G  L     ++  +A+
Sbjct: 263 EGRGFNIATLALNIGRMNIAACGLGGAQAALETTVEYVNDRKQFGKPLSANQSVQFKLAE 322

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  +  +  +    A   D           A   A + K         +  +A++  GG
Sbjct: 323 MATQLTTSRLMIREAARQIDINSPS------APSWAAMAKIHATDNCFELANDALQLHGG 376

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GY+++  + ++ R+   + IL G+   M   V   + K
Sbjct: 377 YGYLKDYKVQQYMRDLRVHQILGGTNQIMREIVARSILK 415


>gi|299768636|ref|YP_003730662.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
 gi|298698724|gb|ADI89289.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           sp. DR1]
          Length = 607

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/459 (18%), Positives = 176/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVRTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSYQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRLLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AAY           PI K +  ++        M
Sbjct: 357 AEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAANNGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++  +++  G+     LD++    LL     +     + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|294811499|ref|ZP_06770142.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294324098|gb|EFG05741.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 408

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 124/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   F    +     ++       A+L  G   S    +   +A   +     +W P +
Sbjct: 78  PYATEFGGGEQPYEVYLQVLEELAAARLTVGLGASVHTLACHALAGYGSKEQQAEWLPDM 137

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  +         W     
Sbjct: 138 LGG-------------GLLGAYCLSEPAAGSDAASLRTRAVRDGEDWVITGTKAWITHGG 184

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           ++D + +LA+  G  G   +   L  G   GL     + K+G + + T +L F       
Sbjct: 185 VADFYTVLARSGGE-GSRGITAFLVPGDAPGLTAAAPEKKMGMKGSPTAQLHFDGVRVPD 243

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+                L  A  +V   + +L EA+ YA  R   G  + D   +
Sbjct: 244 TRRIGEEGQGFTIALSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGL 303

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  +L    A   D+    S EAA A       K +C   A +V  +A
Sbjct: 304 RFLLADMATRIEAGRSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDA 356

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +  + R  RE+    I+ G+     + V   L
Sbjct: 357 VQVLGGYGYTADFPVERLMREAKVLQIVEGTNQIQRMVVARHL 399


>gi|315443171|ref|YP_004076050.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315261474|gb|ADT98215.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 380

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           T     K W P I S E               I + +TE   G+D+A I +   +  D  
Sbjct: 103 TNDEQKKRWLPGITSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++A+ +   G       + +    G    R  +K+G  S 
Sbjct: 149 WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERDMEGFSRGRKLDKMGLHSQ 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R    E + Y++ 
Sbjct: 209 DTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSIAISAIAGARAVFDETLQYSKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R      + +  + EAA A+       
Sbjct: 269 RKAFGQPIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGELTAVEAAKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            W  ++A  V+ + ++  GG GY+ E  +AR Y +    +I  G+   M   +   L
Sbjct: 323 -WATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGREL 378


>gi|116254738|ref|YP_770574.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115259386|emb|CAK10521.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 381

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 145/402 (36%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE       +  AR A  +   L          D+    P    L       GLH    
Sbjct: 6   LGETA-DAIRETTARFAADHIAPL------AAEIDESNTFP--RQLWPEMGALGLHGITV 56

Query: 121 DRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + +    +P   +   PK+ 
Sbjct: 57  EEEFGGAGLGYLDHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWASPEQKRRHLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++  + +K  D         W  ++P 
Sbjct: 117 SGEH-------------VGSLAMSEVGAGSDVVSMRLRAEKKGDRYILNGTKFWITNAPH 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 164 ADVLVVYAKTDPAAGPKGISAFIIEKGLPGFSVSKKLSKLGMRGSDTAELVFEDCEVPAE 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +      V+ +   +  + A+++   +  M+  L   + Y R R   G  + D  +M+
Sbjct: 224 ALMGREGEGVKILMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKAIGDFQLMQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + +A A  + +A + D  ++        R  A     +  + A  V  EA+
Sbjct: 284 GKIADMYVALNSARAYVYSVARACDAGRAT-------RTDAAAAILFASENAVKVSLEAI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 337 QALGGAGYTKEWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 378


>gi|288932298|ref|YP_003436358.1| acyl-CoA dehydrogenase [Ferroglobus placidus DSM 10642]
 gi|288894546|gb|ADC66083.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 390

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 147/400 (36%), Gaps = 40/400 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A+E A      TP+L          D+ E  P    L ++    G H       +   
Sbjct: 16  RAAREFAE--KEFTPEL------ARECDREEKFP--FELWKKCAKLGFHAVAIPEEYGGG 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 ++     +       G           ++ L  +    + +  K+         
Sbjct: 66  GYGPIEQMIVMEEFSAVNPGLGLACLIPTFGVEILLLHGSEEQKEKYVTKV--------- 116

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIML 246
                K    +G+  TE   G+D A+I ++  +  D  + L+G K F+S+  ++D  ++ 
Sbjct: 117 ----AKGDAIMGMANTEPDAGSDAASIKTRAVRDGDE-WVLNGTKQFISNGSIADFILVT 171

Query: 247 AQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
           A+             +   + +    G    ++  K+G R+  T E+  +N       L+
Sbjct: 172 ARTSEPKSFEERHKGISYFIVETDREGYKATKITGKMGIRATDTAEVSLNNVRVPAENLV 231

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       + +   +  +  A  +V   R +L   + Y ++R   G  L     ++  I
Sbjct: 232 GEEGKGFYYMMEFFDITRVWVAAQAVGIARGALKLVVDYVKQRKAFGMPLAAFQYVQFKI 291

Query: 360 ADIALDIAAATALSFRLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           A++A  I AA  L++R A    +  K           ++ + K++  ++A      A++ 
Sbjct: 292 AELATKIEAARTLTYRAAAVQVETGKPD-------NTLSAMAKWYAGEVAVETCNWALQF 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  I + YR++    I  G+     L +   +
Sbjct: 345 HGGYGYIDEYPINQFYRDAKITEIYEGAKEIEKLIIARNI 384


>gi|239813819|ref|YP_002942729.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239800396|gb|ACS17463.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 598

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/527 (18%), Positives = 180/527 (34%), Gaps = 71/527 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KVEFHP 101
           +   P+    +        ++   +E  + A   T  L+      G   D    +V+   
Sbjct: 25  LKALPAHAETD-----ADTINAVIEEAGKFAAEVTFPLNISGDEEGCTLDKATHEVKTPK 79

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +     + +  G      D +F          +      ++        M P ++  + 
Sbjct: 80  GFKDAYAKYVEGGWPALSCDPAFGGQGLP--FVVNQCLFEMLNSANQAWTMYPGLSHGAY 137

Query: 162 VAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL    T    K + PK+ S E+  T             + LTE   GTD+  + ++ +
Sbjct: 138 EALVAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGTDLGLLRTKAE 184

Query: 220 KISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED--------- 264
             +DG Y ++G+K F+S+   D       ++LA+  +   G   +   +           
Sbjct: 185 PQADGSYRITGNKIFISAGEHDMADNIIHLVLARLPDAPKGSKGISLFVVPKYKVKADGS 244

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N +    L++K+G   NAT ++      G L+G+ N     +  M     L     
Sbjct: 245 LGERNPIFCAGLEHKMGIHGNATAQIVIEGATGSLVGEPNKGLQAMFVMMNAARLGVGNQ 304

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATA 371
           S+    V+   A+ YA+ R                  +I  P +++ +           A
Sbjct: 305 SLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAEGGRA 364

Query: 372 LSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L        D+     +E           ++ PI K +            M+  GG G+I
Sbjct: 365 LQIFCTMLLDKEHHHPDEKVRKDSGELVALLTPIVKAFITDNGHIATNACMQVFGGHGFI 424

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQDLGSSG 480
           +E  + +  R++  N I  G+     LD+L     G N      F +L + L ++ G + 
Sbjct: 425 KEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVAKLVEEEGVNE 484

Query: 481 KKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
           K       I  L D ++    + G   F       A++   L  AG 
Sbjct: 485 KMAEFINPIAGLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGH 531


>gi|167768658|ref|ZP_02440711.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1]
 gi|167710182|gb|EDS20761.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1]
 gi|291559739|emb|CBL38539.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
          Length = 380

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 140/376 (37%), Gaps = 32/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+ E       LL +    GL    + + +            A  +  +++++A   
Sbjct: 30  RDMDEAEKFDM--DLLDKMKKYGLMGIPYSKEYGGEGADV--LTYALAMEEVSKVDASAG 85

Query: 152 MSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           ++ SV      S +    +    + +               P+   S     GLTE   G
Sbjct: 86  ITISVHTSLCCSCINDYASEEQKQKFL-------------RPLVDGSKIGCFGLTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD + + +  +   D  Y L+G K F ++   +D FI+ A  +   G   +   + D   
Sbjct: 133 TDASGVKTTAKLDGDH-YVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGMSAFIVDRDS 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   +   ++G R+ +  E+   +       L+G   +             +     S
Sbjct: 192 EGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALTGGRIGIGAQS 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L EAI Y + R   G  +      +  IA +   I AA  + +R A + D+ +
Sbjct: 252 VGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARLMVWRAAKAKDDHE 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + +        +A   K +   +A  V   A++ +GG GY  E  + R YR++    I  
Sbjct: 312 NFA-------PLAAQCKLFASDVAVEVTRGAVQMLGGYGYSREYPVERMYRDAKITEIYE 364

Query: 445 GSGNAMVLDVLNLLEK 460
           G+  AM + V   L +
Sbjct: 365 GTSEAMKMIVGGGLLR 380


>gi|327310601|ref|YP_004337498.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326947080|gb|AEA12186.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 410

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 67/405 (16%), Positives = 136/405 (33%), Gaps = 46/405 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E+V    A     +   N P L                     ++++    G +      
Sbjct: 28  EFVEREIAPRAMEIEERNEPPL--------------------DIIKKIAEQGFYGIGIPE 67

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +             +  +             +    + + L  T    + + P      
Sbjct: 68  KYGGQGGDHRMAAIMSEEFCRVLPGLSVYFGTNELFVTPILLFGTEEQKQKYIP------ 121

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +        +TE   G+D+A I ++ +K  D         +  SS ++D 
Sbjct: 122 -------PIARGEKLGAFAVTEPCCGSDVAGIQTRAEKKGDRWIINGRKAFISSSDVADY 174

Query: 243 FIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           F++LA+     + R     +   + +    G   ++  +K+G   +   EL F N     
Sbjct: 175 FVVLARTYPPPDKRTRYLGLTFFIVEKGTPGFKVEQCYHKMGLHGDNACELVFENVEVPD 234

Query: 299 LGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +     G +  M+      +  A  +V   + +  +A  Y  +R   G  +     +
Sbjct: 235 ENRVGEEGMGFIYAMETFDRTRIGVAAQAVGMAQGAFEKAFQYVHQRQAFGVPVAYFQAI 294

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           + ++ D+A  + +A  L++  A   DE +           +A + K++  + A  +I+EA
Sbjct: 295 QFSLMDMAAKLMSARLLTYLAAKLADEGRKE------FTFVASLAKFYATEAAEEIISEA 348

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +   GG G I E  I R  R+     I  G+ N   L     L +
Sbjct: 349 INLHGGVGVIVETGIERFLRDVKITQIYEGANNIQRLTAYRQLIR 393


>gi|331246186|ref|XP_003335727.1| acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309314717|gb|EFP91308.1| acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 444

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 127/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  ++ D+    P+   L  +    G+        +  + R    H +    +   +   
Sbjct: 85  PIAQKVDQENQFPSH--LWTKFGEMGILGITVPEKYGGLDRSYLEHTLVMEEISRGSGSI 142

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T      + P + S                   L ++E   
Sbjct: 143 GLSYGAHSNLCINQINRHGTEAQKTKYLPDLISG-------------KKVGSLAMSEAGS 189

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++     K            W  + P +   ++ A+         +   L + + 
Sbjct: 190 GSDVVSMRLTAVKKEGRYILNGTKFWITNGPDASTLVVYAKTSPEKAHRGITAFLIESNF 249

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F N        L      V+ +   + L+  ++S   
Sbjct: 250 PGFSTHQKLDKLGMRGSNTCELVFENCEVPEENVLGEVDKGVQVLMSGLDLERLVLSGGP 309

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +   A+ Y   R   G  +    +++  IAD+   + A+ +  + +  + D  K
Sbjct: 310 LGLMQAAFDVALPYVHERKQFGKPIGTFQLLQGKIADMYTKLNASRSYVYAVGRACDLGK 369

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               + A A         +    A  V  +AM+ +GG+GYI +    R +R++    +  
Sbjct: 370 VSRRDCAGA-------ILYSSDRALEVATDAMQMLGGNGYINDYPTGRIFRDAQLYRVGA 422

Query: 445 GSGNAMVLDVLN 456
           G+     + +  
Sbjct: 423 GTQEIRRMLIGR 434


>gi|288959960|ref|YP_003450300.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288912268|dbj|BAI73756.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 377

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 130/384 (33%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAW--------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
                 D++    AW         A L      GL   +    F            A   
Sbjct: 14  ARAFAQDRLAPSAAWRDRSGAFPKAELAEMGELGLMGMLVPEEFGGAATDHVAYALAIEE 73

Query: 141 YLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                     +MS   +   M  L   T      +               PM +  +   
Sbjct: 74  IAAGDGAVSTIMSVHNSVGCMPILKFGTDAQKDRFLK-------------PMARGEMLGA 120

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             LTE + G+D +AI ++ ++  D        ++  S   +D  I+ A  +   G   + 
Sbjct: 121 FCLTEPQAGSDASAIRTRARRDGDHWVLDGTKQFITSGSQADVAIVFAVTDPAAGKKGLS 180

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             +      G    R + K+G   + T ++ F +       +LG                
Sbjct: 181 AFIVPTDTPGYQVARTEEKLGQHCSDTCQILFEDCRVPGDLMLGAEGAGYKVALANLEGG 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  +V   R +L  A+ YA+ R   G  +I    +   +AD+A  + AA  L    
Sbjct: 241 RIGIASQAVGMARAALDHAVRYAQERQSMGVPIIQHQAVAFRLADMATKVEAARQLVLHA 300

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  D      +EAA A       K +  +MA  V ++A++  GG GY+ +  + R YR+
Sbjct: 301 ASLRDAGVPCMKEAAMA-------KLFASEMAEKVCSDAIQIHGGYGYLNDFPVERIYRD 353

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
                I  G+ +   L +   L +
Sbjct: 354 VRVCQIYEGTSDIQRLVISRALVR 377


>gi|222055279|ref|YP_002537641.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564568|gb|ACM20540.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 379

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 140/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   + D+    P   +L+R+    G   S     +        ++ I    +       
Sbjct: 26  PIAMQIDEEHMIPE--SLVRKMGVMGFLGSYLPDEYGGAGLDMLSYSILVEEVSKACGSS 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   +    T    K W P +                 V     LTE   
Sbjct: 84  GVLISAHTSLACGPIFTFGTEEQKKKWLPAL-------------NMGQVIGCFLLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  AI +  +   D    ++G K F+++       ++ A  +  +    V   + D  
Sbjct: 131 GSDAGAIATTYKHDGDDF-VINGSKIFITNGGYKGTGVLFATSDKSLKHKGVSAFIIDLQ 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + + K+G R + T      N         N+     E  KI +  L+   + +
Sbjct: 190 SPGVEILKNEKKLGIRGSYTTAFALDNVRIPA---ANLLGQEGEGFKIAMDTLNGGRIGI 246

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +AE     A+ Y++ R   G  + D   ++  +AD+   I  +  ++++ A   
Sbjct: 247 ASQALGIAEGAFERALAYSKERKQFGAPISDLQAIQFKLADMYARIETSKLMTYKAACLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K+ + E+A  +++A     +  K       EA++  GG G+I +  + R YR++   
Sbjct: 307 DKKKNYTMESAMCKMLASEAATYVTK-------EAIQIHGGYGFIVDYEVERMYRDAKIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +  LL
Sbjct: 360 EIYEGTNEVQRVVISKLL 377


>gi|289662786|ref|ZP_06484367.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 393

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 131/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 35  PHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +   +A   T  V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMTTWFIASYGTDAVRAQWGEAMTSG-------------AKLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 140 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S+
Sbjct: 199 GITYGRKEEKMGWNSQPTRGVTFENVRIPAENLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|47228564|emb|CAG05384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 399

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 138/381 (36%), Gaps = 27/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P   + DK   +PA    ++     G+                 A+ +    +   
Sbjct: 37  RELTPIAAKLDKEHIYPA--KQIQELGAMGVMAMEVPEELGGAGMDYLAYCLATEEISRG 94

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  +   +      +    +    K W     S E                   L+
Sbjct: 95  CASTGVVVSVNNSLYIGPILKFGSEEQKKQWITPFTSGEQ-------------VGCFALS 141

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLL 262
           E   G+D  A ++   +  D         W  +S  + A ++ A  + ++     +   L
Sbjct: 142 EPGNGSDAGAASTTAFQEGDEWVLNGTKAWITNSWDASAAVVFATTDKKLKHKAGISAFL 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
                 GL   + ++K+G ++++T  +   +    L   L     G    M+ L    L 
Sbjct: 202 VPMPHPGLSLGKKEDKLGIKASSTANIILEDCRIPLSYMLGPRGAGFKIAMQTLDSGRLG 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++   + SL  A+ YA++R+  G  +     ++  +AD+ + + +A  L+++ A  
Sbjct: 262 IASQALGIAQASLDCAVDYAQKRNAFGAPISKLQAIQFKLADMTVALESARLLTWKAAIL 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K  ++EAA A++ A     +C         +A++ +GG GY+ +    RHYR++  
Sbjct: 322 RDSKKPFTKEAAMAKLAASEAATYCS-------HQAIQILGGMGYVSDMPAERHYRDARI 374

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     L + N + K
Sbjct: 375 TEIYEGTSEIQRLVIANQVLK 395


>gi|184157703|ref|YP_001846042.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876388|ref|ZP_08444157.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209297|gb|ACC56695.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322508010|gb|ADX03464.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517598|gb|ADX91979.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735398|gb|EGJ66456.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 383

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 139/373 (37%), Gaps = 31/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSV 156
           E  P     ++     GL        +E +    +     A  L   +      + + + 
Sbjct: 35  EIPPDIVEQMK---ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +S + +  T      + P++   E             V     LTE   G+D A++ +
Sbjct: 92  IGSSGLIIDGTEAQKSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKT 138

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQR 274
              K  D  Y L+G K F+++ P +  F ++A+      G   +   + D    G+   +
Sbjct: 139 SAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGK 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
              K+G +   T ++ F N        +      G    MK+L    L  A +SV     
Sbjct: 198 RDKKMGQKGAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L ++++YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E 
Sbjct: 258 MLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   K +  +M   V    ++  GG+GYI E +I R YR+     +  G+    
Sbjct: 317 ------ASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQ 370

Query: 451 VLDVLNLLEKGTN 463
            + +   + +  +
Sbjct: 371 QMIIARNMIRAAS 383


>gi|227536690|ref|ZP_03966739.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243491|gb|EEI93506.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 383

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 145/373 (38%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L R+    G    I    +       Q +      +  +       +
Sbjct: 30  EWDEAQTFPV--ELFRKMGSYGFMGIIVPEEYGGAGLGYQEYITILDEISKVCGSIGLSV 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +         K + PK+ + E+                 GLTE   G+D 
Sbjct: 88  AAHNSLCTNHILSFANEEQKKKYLPKLATAEW-------------IGAWGLTETGSGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGL 270
             +T+  ++  D  + L+G K F++  +S    ++    G+ G    +   + +    G 
Sbjct: 135 GGLTTVAERDGD-YFILNGSKNFITHAISSEVAVVITRTGQKGDKKGMTAFIIEKGTPGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T  L F N        +     G V+ +K+L    +  A +S+  
Sbjct: 194 SAGKKENKLGMRASETACLFFDNCRVHKDQIVGEEGQGFVQALKLLDGGRISIAALSLGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A+ YA  R      + D   +   +A++A  + AA  L+ + A   +     S
Sbjct: 254 ARGAYECALKYANEREQFNQKIFDFQAVGFKLAEMATQVEAAELLTRQAAFLKESGTKSS 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           + +A A       K +  + A  V  E+++  GG G+ ++    +++R++   +I  G+ 
Sbjct: 314 KISAMA-------KLYASEAAVEVSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTS 366

Query: 448 NAMVLDVLNLLEK 460
           +   + +   ++K
Sbjct: 367 SIQKMVIAREIQK 379


>gi|313904210|ref|ZP_07837589.1| Butyryl-CoA dehydrogenase [Eubacterium cellulosolvens 6]
 gi|313471012|gb|EFR66335.1| Butyryl-CoA dehydrogenase [Eubacterium cellulosolvens 6]
          Length = 390

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  D+ E  P     + +   +G         +      +  + +    +  +    
Sbjct: 26  PLAQEIDEEERFP--QETIDKLAKNGFMGITVPVEYGGQGCDELTYVLCMEEIAKVCGTT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L + +      +    T    + + PK+   E+                 GLTE   
Sbjct: 84  AVALSAHTSLCIDPIMTFGTEAQKQKYIPKLAKGEW-------------LGAFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCF-LVPRL 261
           GTD     ++     +   + L+G K F+++  ++D +I++A     E R   F  +   
Sbjct: 131 GTDAQGQQTKAVLDENTNEWVLNGSKCFITNGKVADVYIIIAVTGIVEKRGRKFKEISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
           + + +  G  +   + K+G R ++T EL F +        L     G    M  L    +
Sbjct: 191 IVEKNTPGFTFGAKEKKMGIRGSSTYELIFQDCRIPKDNMLGAKGKGFGIAMHTLDGGRI 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L   + Y + R   G  +      +  +A++   + AA  + ++ A 
Sbjct: 251 GIATQALGIAEGALDLTVAYTKERKQFGRSISAFQNTQFQLANMKAHVDAAQLMVYKAAC 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D       +A+   + A   K +  + A  V  + ++  GG GYI E  + R  R++ 
Sbjct: 311 AKDA--VGFAQASTYGLEAAEAKLYAAETAMDVTTKCVQLFGGYGYIREYDVERMMRDAK 368

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+   M + +   L K
Sbjct: 369 ITEIYEGTAEVMRMVISANLLK 390


>gi|330971272|gb|EGH71338.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 332

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 128/346 (36%), Gaps = 23/346 (6%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           +      +   AH +    +   +   A    + S    + +    +P     + P++ S
Sbjct: 7   EEYGGAGLGYLAHVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPRLIS 66

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+                L ++E   G+D+ ++  +  K  D         W  + P +
Sbjct: 67  GEH-------------VGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGSKTWITNGPDA 113

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D +++ A+ +       +   + +    G       +K+G R + T EL F +       
Sbjct: 114 DTYVIYAKTDLEKAAHGISAFIVERDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEEN 173

Query: 301 DLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L V  G V  +   +  +  ++S      M+  +   + Y   R   G  + +  +++ 
Sbjct: 174 LLGVLDGGVRVLMSGLDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQG 233

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   + A+ A  + +A + D  ++  ++AA           +  + A  +  EA++
Sbjct: 234 KVADMYTQLNASRAYLYAVAQACDRGETTRKDAAG-------VILYSAERATQMALEAIQ 286

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +GG+GYI E    R  R++    I  G+     + +   L   T 
Sbjct: 287 ILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR 332


>gi|195435822|ref|XP_002065878.1| GK20558 [Drosophila willistoni]
 gi|194161963|gb|EDW76864.1| GK20558 [Drosophila willistoni]
          Length = 423

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 135/377 (35%), Gaps = 25/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK++         ++    G      +  +         H I        A   
Sbjct: 64  PQAKEIDKLDNFKDMRPFWQKLGELGFLGITAEPEYGGTGGTYLDHCIILEEFSRAAGGV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    TP     + PK+ S E+               GL ++E   
Sbjct: 124 ALSYGAHSNLCINQLTKNGTPEQKAKYLPKLCSGEH-------------IGGLAMSEPGA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D+ ++  + ++  D         W  +   +D  I+ A+          +   + + +
Sbjct: 171 GSDVVSMKLRAERKGDYYVLNGTKFWITNGSDADTLIVYARTGPSDAPGHGITAFIVETA 230

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +  +K+G R ++T EL F +       +LG  N     +        L  A  
Sbjct: 231 WEGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENKGVYVLMSGLDYERLVLAAG 290

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+ +   A  YA +R     ++ +  +++  +AD+   ++A+ +  + +A S D  
Sbjct: 291 PVGLMQAACDVAFDYAHQRKQKNKLIGEFQLLQGKMADMYTLLSASRSYLYAVARSCDNG 350

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S++             +C + A  +  +A++ +GG+GYI E    R  R++    I 
Sbjct: 351 VRSSKD-------CAGVILYCAENATKLALDAIQILGGNGYINENPTGRLLRDAKLYEIG 403

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       +   L +
Sbjct: 404 AGTSEIRRWLIGRQLNQ 420


>gi|75677199|ref|YP_319620.1| Acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74422069|gb|ABA06268.1| isovaleryl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 407

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 145/416 (34%), Gaps = 31/416 (7%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHAL 106
             +   L      + +    +L   A+     +  +      P     D     P    L
Sbjct: 9   DWLWLHLGEFRVSISNAFNFDLGETADAIRETVRDFAANEIAPRAAEIDTSNQFP--RDL 66

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
             R    GLH    +  +         H I    +   +        + S    + +   
Sbjct: 67  WPRLGALGLHGITVEEDYGGAGLGYLEHCIAMEEISRGSASVGLSYGAHSNLCINQLRRN 126

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    + + PK+ S E                 L ++E   G+D+ ++ ++  +  D  
Sbjct: 127 GSDAQKRKYLPKLISGEN-------------VGALAMSEPGAGSDVISMRTRADRKGDRY 173

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  +  ++D  ++ A+ +   G   +   + +   NG    +  +K+G R + 
Sbjct: 174 ILNGSKMWITNGTIADTLVIYAKTDAAAGARGITAFILEKGMNGFSTAQKLDKLGMRGSD 233

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRR 342
           T EL F +        L  +   V  +   +  + A+++   +  M+  +   + Y R R
Sbjct: 234 TCELVFEDCEIPEDNVLGDAGRGVNVLMSGLDYERAVLAAGPLGIMQACMDMVMPYVRER 293

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    +++  +AD+ + + A  A  + +A + D  +   E+AA A         
Sbjct: 294 KQFGQPIGSFQLVQAKVADMYVTMNACRAYVYAVAKACDRGEITREDAAGA-------IL 346

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + A     +A++ +GG+GYI +    R  R++    I  G+     + +   L
Sbjct: 347 YSAEKATQCALDAIQLLGGNGYINDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 402


>gi|311692893|gb|ADP95766.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
 gi|311693896|gb|ADP96769.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 389

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 139/377 (36%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P  E  D+    P    L R+    GL        +    +   AH I    +   +   
Sbjct: 33  PRAEEIDRNNEFPM--DLWRKMGDMGLLGITVSEEYGGSDMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHRNGTEEQKQKYLPKLVSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   D         W  + P ++ +++ A+ +   G   V   + +   
Sbjct: 138 GSDVISMKLTAKDEGDHYLLNGNKMWITNGPDANTYVIYAKTDTSAGSRGVTAFIVERDA 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +         NV  G     K+L+  LD   + +S
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFQDCKVP---KENVLGGVGNGAKVLMSGLDYERLVLS 254

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M+ ++   + Y R R   G  + +  +++  +AD+   +  A +  + +A S D
Sbjct: 255 GGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVADMYTWMNTAKSYVYMVAMSAD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                + + A           +  +MA  +  +A++ +GG+GYI E    R  R++    
Sbjct: 315 RGAETTRKDA------AGAILYSAEMATKIALDAIQLLGGNGYINEYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|289624775|ref|ZP_06457729.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 168/479 (35%), Gaps = 52/479 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDGATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 493


>gi|326329412|ref|ZP_08195736.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952738|gb|EGD44754.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 139/375 (37%), Gaps = 35/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V FH  W         L +++   GL C   D  +     K   +  +     MA++ A 
Sbjct: 28  VPFHDQWEKDGIVPRELWKKAGDTGLLCFDVDEEYGGPGIKD-FRFNSVLHEEMAKIGAS 86

Query: 150 H--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +      ++ + TP     W P   S               +   + +TE   
Sbjct: 87  GPGFFVHTDIIVPYISHLGTPEQKARWLPGCVSG-------------DIITAVAMTEPGA 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y L+G K F+S+ + +D  I++A+     G   +  L+ +  
Sbjct: 134 GSDLQGVRTTAVDKGDH-YLLNGSKTFISNGINADLVIVVAKTNPEAGAHGISLLVVERG 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIM 323
             G    R  +K+G ++  T EL F++        L         +  L     +  A +
Sbjct: 193 MEGFERGRNLDKVGMKAQDTAELSFTDVVVPKENLLGEEGSGFISLMTLLPQERISVASI 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+ +   L  ++ YAR R   G  +         +A++A +   A           +  
Sbjct: 253 AVAAVEQVLELSLDYARTREAFGRPIGRFQNTAFTLAEMATEAYLARLFLNDAVTQLNAG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +       ++A + K+W  ++    + + ++  GG GY+ E  IA+ + +S   +I 
Sbjct: 313 TADT-------VLASMAKWWTTELQKKFVDQGVQIHGGYGYMMEYPIAKAFIDSRIQTIY 365

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 366 GGTTEVQKLIISRHL 380


>gi|85374832|ref|YP_458894.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84787915|gb|ABC64097.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 382

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 145/405 (35%), Gaps = 29/405 (7%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G++ L+     +  MA   T       P    WD+    P    +++++   G       
Sbjct: 3   GQFALTDDQLAIQEMAQRFTA--DNITPHAAEWDEQHHFP--KDVIKQTAELGFGAIYVS 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    +S    +A M+       V   + P + + 
Sbjct: 59  EESGGIGLGRLEAALIMEAMAYGCPTTSAFISIHNMAAWMIDQFGGQGVKDKYLPDLVTM 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E                   LTE   G+D A + +      D  Y L+G K F+S   ++
Sbjct: 119 E-------------KIASYCLTEPGSGSDAAGLKTSAVLDGDH-YVLNGTKQFISGGGVN 164

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D ++ + +         +  L+ D    G+ +   + K+G  ++ T ++   +    +  
Sbjct: 165 DVYVTMVRTSDHK-TKGITCLVIDKDTPGVSFGAPEKKLGWNASPTAQVILEDARVPVEN 223

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    M  L    L+    S+ G +  L EA+ Y + R      + D    + 
Sbjct: 224 RVGDEGEGFRFAMMGLDGGRLNIGACSLGGAQRCLDEAVAYTKERQQFDQPVADFQNTQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A D+ AA AL +  A         +E A      + + K         ++ +A++
Sbjct: 284 MLADMATDLEAARALLYLAAAKV------TENAPDKSRFSAMAKRLATDNGSKIVNDALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             GG GY+++  I R +R+   +SIL G+   M + V   L +  
Sbjct: 338 LFGGYGYLKDYPIERFWRDLRVHSILEGTNQVMRMIVGRDLLRQG 382


>gi|119872929|ref|YP_930936.1| butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184]
 gi|119674337|gb|ABL88593.1| Butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184]
          Length = 410

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 133/379 (35%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ +  P    LL++    G         +             +  +       
Sbjct: 36  PRAMEIEEKDEVP--RDLLKKIAEQGFFGIGIPEKYGGQGGDHRMAAIMSEEFCRVLPGL 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +    + + L  +    + + P             P+ K        +TE   G
Sbjct: 94  SVYFGTNELFITPIMLFGSEEQRQKYIP-------------PIAKGEKFGAFAVTEPCCG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           +D+A I ++ +K+ +         +  SS ++D FI+LA+     + ++    +   + +
Sbjct: 141 SDVAGIQTRAEKVGNKWVINGRKAFISSSDIADYFIVLARTYPPPDKKLRYLGLTFFIVE 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G   ++  +K+G   +   EL F N        +     G +  M+      +  A
Sbjct: 201 RDTPGFKVEQCYHKMGLHGDHACELVFENVEVPDENRVGEEGMGFLYAMETFDRTRIGVA 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +  +A  Y  +R   G  +     ++ ++ ++   I  A  L++  A   D
Sbjct: 261 AQAVGMAQGAFEKAFQYVHQRQAFGVPIAYFQAIQFSLVEMMAKIFTARLLTYLAAKLAD 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +           +A + K++  ++A  VI+EA+   GG G I E  + R  R+     
Sbjct: 321 ENRKE------FTFVASLAKFYATEVAEEVISEAINLHGGVGVIRETGVERFLRDVKITQ 374

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+ N   L     L +
Sbjct: 375 IYEGANNIQKLVAYRQLIR 393


>gi|120613007|ref|YP_972685.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
 gi|120591471|gb|ABM34911.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
          Length = 395

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 141/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               +  R A     Q     P     D+ +  P    L R+    G+       ++   
Sbjct: 14  GEDIDALRDAVREFAQAE-IAPRAGEIDREDQFPM--DLWRKMGELGVLGITVSEAYGGA 70

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    +    + + PK+ S E+   
Sbjct: 71  QMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGSEEQKRKYLPKLVSGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLRAEDKGGYYLLNGNKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N        L    
Sbjct: 178 AKTEPELGARGVTAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVN 237

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 238 GGAKVLMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMY 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  + ++ +A + D     +E     R        WC + A  +  E ++  GG+G
Sbjct: 298 TVLQAGRSFAYTVAKNLDM--LGTEHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNG 355

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 356 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|89092356|ref|ZP_01165310.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083444|gb|EAR62662.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 373

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 140/374 (37%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+V   P  + L R+    GL        +  V     AH I    +   +   
Sbjct: 18  PRAEEIDQVNEFP--NDLWRKFGDMGLLGITVKEEYGGVDMGYLAHVIAMEEISRASASV 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 76  GLSYGAHSNLCVNQIHRNGNEEQKQKYLPKLISGEH-------------IGALAMSEPNA 122

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +   D         W  + P ++ +++ A+ + + G   +   + +   
Sbjct: 123 GSDVVSMKLHARDNGDHYLLNGNKMWITNGPDANTYVIYAKTDIKAGPKGITAFIVERDF 182

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 183 PGFSRHQKLDKLGMRGSNTCELVFEDCPVPKENILGELNGGVKVLMSGLDYERLVLSGGP 242

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M  ++   I Y R R   G  + +  +++  +AD+   + A+ +  +  A +    +
Sbjct: 243 LGIMEAAMDIVIPYIRDRKQFGQAIGEFELVQGKVADMYSIMNASKSYVYMAAQAAVRGE 302

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  +MA  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 303 ASRKDAAG-------CILYTAEMATKIALDAIQLLGGNGYINEFPTGRLLRDAKLYEIGA 355

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 356 GTSEIRRMLIGREL 369


>gi|126642194|ref|YP_001085178.1| putative acyl CoA dehydrogenase oxidoreductase protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 330

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 121/340 (35%), Gaps = 24/340 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIF 179
              +          + A             ++S   +    + L   + +  + + PK  
Sbjct: 6   PDEWGGAGMDYVSLVLAIEEIAAGDGAISTIVSVQNSLICGITLAYGSEQQKQTYLPKFA 65

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                  LTE   G+D +AI  + ++  D        ++  S   
Sbjct: 66  SGEW-------------LGCFCLTEPHVGSDASAILCKAERDGDHWILNGVKQFITSGKN 112

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +   ++ A  + + G   +   L   +  G    R+++K+G  ++ T  +   +    L 
Sbjct: 113 AQVALVFAVTDKQAGKKGISCFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLE 172

Query: 300 GDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +     G    +  L    +  A  SV   R +   A+ YA  R   G  L+    + 
Sbjct: 173 NLVGQEGEGYKIALSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVG 232

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  L    A   D      +EA+ A       K +   MA  V ++A+
Sbjct: 233 FRLADMATQIEAAHQLVLHAATLKDAGLPCLKEASMA-------KLFASTMAERVCSDAI 285

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG GY+ +  + R YR+   + I  G+ +   L +  
Sbjct: 286 QIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQRLVIAR 325


>gi|299140247|ref|ZP_07033413.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298597786|gb|EFI53958.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 383

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 84/362 (23%), Positives = 144/362 (39%), Gaps = 34/362 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR+    GL        +         +   A   + A   A  ++     +  + AL
Sbjct: 42  KLLRKLFELGLMGIQVPEQYGGAAG-TLFEAVLAVEEISAVDPAVGVLVDVQNTLVISAL 100

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K W PK+                S+     L+E   G+D  A+  +  +  
Sbjct: 101 MRWANEAQKKSWLPKLAE--------------SLTGAYALSEAVSGSDAFALQCRAARQE 146

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG Y L+G K W  ++  +  F++ A ++   G   +   L +    G    R ++K+G 
Sbjct: 147 DGDYLLNGSKLWITNAVEAGLFLVFATLDATAGYKGITCFLVEKGTPGFTLGRKEDKLGI 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EA 335
           R+++T EL FSN         NV   P +  KI I  L+   + +    V LA      A
Sbjct: 207 RASSTCELLFSNCRVPA---ANVLGEPGKGYKIAIETLNEGRIGIGAQLVGLASGAWRHA 263

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YAR R   G  L +   M+  +A +A+D+ AA  + +  A   D      +EAA A  
Sbjct: 264 ARYARERKQFGKPLAEFQAMQFQLARMAMDVEAARLMVYNAARLKDSGVEYLKEAAMA-- 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  ++A    + A+E  GG+G+++E  + + YR++    I  G+    +  + 
Sbjct: 322 -----KLFASEVAERTASLAVEVFGGAGFVKEYPVEKLYRDAKIGKIYEGTSFMQLATIA 376

Query: 456 NL 457
            L
Sbjct: 377 KL 378


>gi|192289455|ref|YP_001990060.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283204|gb|ACE99584.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 593

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/528 (20%), Positives = 207/528 (39%), Gaps = 69/528 (13%)

Query: 40  DSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD-- 95
           D +L++L  N  + +   +     G+Y    TAQ L     + +  L      G++    
Sbjct: 8   DDILLSL--NHGAGLQAAVAAGHFGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIK 65

Query: 96  ----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
               KV   P W    +R I  G +       F       A  + AA   + A       
Sbjct: 66  LEHGKVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPMA--VNAACTEIWASSNMAFG 123

Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + P +T +++ AL T  +  + + +  K+ S E+  T             + LTE + G+
Sbjct: 124 LCPLLTLSAIDALHTHGSDALKQVYLGKLISGEWTGT-------------MQLTEPQAGS 170

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLV 258
           D+ A+ ++ ++ +DG Y + G K F++    D        +LA++         +  FLV
Sbjct: 171 DVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLV 230

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310
           P+ L +     G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     + 
Sbjct: 231 PKFLVNADGTLGARNDIYPSGVEHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMF 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIAD 361
            M     L   +  V     +  +A+ YA+ R               +I  P +KR +  
Sbjct: 291 TMMNQARLAVGLEGVGIADRAYQQALAYAQERKQGRAVGSAGPGSDPIIKHPDVKRTLLT 350

Query: 362 IALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEA 415
           +   I AA  + +  A + D A   ++        A   ++ PI K +   +   V +  
Sbjct: 351 MRALIGAARTICYSTAVALDIAARSTDPKVKASATARGALLTPIAKAFSTDIGIEVASLG 410

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL- 472
           ++  GG G+IEE   A+HYR++    I  G+       L    L   G      L   L 
Sbjct: 411 VQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVTRKLGANGGASVFALLDELT 470

Query: 473 ----EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
               + +  +     +T LR    L +  +  +R+L +K+  A++ A 
Sbjct: 471 LIVKDVEASNDPGFGLTGLRLREGL-EALERTSRYLLDKLGSATNDAL 517


>gi|118377002|ref|XP_001021683.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89303449|gb|EAS01437.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 405

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 133/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + + +   G  C             +            A +  
Sbjct: 55  PFASEWDQKSQSPI--EVYKEAGKLGFACIYSSPDHGGSGMDRVSASLVFEALATACVST 112

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++      +   +W P++ + E                   LTE   G
Sbjct: 113 SSYLSILNMNHWIIDTYGNEKQKAEWLPQLSTVE-------------KFSSYCLTEPGSG 159

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           +D A + +  +K   G Y ++G K F+S+   SD ++++ +  E    C LVP       
Sbjct: 160 SDAANMKTFAKKDG-GDYVINGSKCFISNAGFSDLYVVMCKTGENERSCILVP-----SD 213

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL + + + K+G  ++ T  + F N       L+                  ++ A  
Sbjct: 214 AKGLSFGKPEVKMGWHASPTASITFDNVRVPQSNLISTEGNGFKIAMTALDGGRVNIAST 273

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+      LA+   Y  +R   G  +      +  IA++A D+ A+  L    A   D  
Sbjct: 274 SLGSAAQCLAKTKEYVGQRKQFGKSIDSFQNTQFRIAEMATDLIASRLLVREAAKKIDLN 333

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                      + A + K    +    ++ + ++  GG GYI E +I RH R+   N IL
Sbjct: 334 HPNK------TLYASMAKIQATEKCYNIVDQCLQLHGGYGYISEYNIERHLRDLRVNRIL 387

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   M L V   + K
Sbjct: 388 EGTNEIMRLIVSRQVIK 404


>gi|119505310|ref|ZP_01627384.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2080]
 gi|119458765|gb|EAW39866.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2080]
          Length = 597

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 84/504 (16%), Positives = 179/504 (35%), Gaps = 62/504 (12%)

Query: 30  LFIGM--NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHA 86
               +  N +     L    A++ S      E +   +++    E  +   N  +P    
Sbjct: 7   PLRDLQFNLFE----LFDYEAHYQS--LSGYEDVSAELVTTILNEFDKFCSNILSPLNAV 60

Query: 87  YGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               G  W+  +V     +    R+ +  G      + ++      ++  I    +   A
Sbjct: 61  GDKEGCTWNDGEVATPSGFKEAYRQYVEAGWPALANEPAYGGQGLPESLSIVLGEMRGTA 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
               G     S  + + + L  T    + +               P+ + +    + LTE
Sbjct: 121 NWSWGMYPGLSHGAVNTIELHGTESQKQRFL-------------TPLVEGTWTGTMCLTE 167

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  + ++ +  +DG Y ++G K F+SS   D       I+LA++         +
Sbjct: 168 AHCGTDLGLLRTKAEAAADGSYQITGTKIFISSGEHDLTENIVHIVLARLPDAPIGVKGI 227

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             F++P+   +     G  N +    +++K+G   NAT  + F    G+LLG+ N     
Sbjct: 228 SLFIIPKFNVNDDGSMGERNTVRCGSIEHKMGIHGNATCVMNFDGARGYLLGEPNQGLQA 287

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +        + +A+  ++ M +   +++ YA+ R                  +I  P ++
Sbjct: 288 MFTFMNTARIGTALQGIAHMELGYQKSLAYAKDRLQMRSVTGPKNPDGPADPIIVHPDVR 347

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPA 410
           R +            +        D  +  ++E            M PI K +  +    
Sbjct: 348 RMLLTQKALSEGGRMMVAYTGKLVDVIECTTDEMEKKSAEDMLSFMTPIAKAFLTETGFE 407

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
               A++C GG GYI+E  + ++ R++    +  G+     LD +   +L  G  L +  
Sbjct: 408 SANLALQCFGGHGYIKEWGVEQNVRDARIGMLYEGTTGIQALDFIGRKVLGSGGVLLQNF 467

Query: 469 FSTLEQDLGSSGKKVITILRDSIS 492
              +      + +  +  L++ I 
Sbjct: 468 TREIHHFCKENAE--VAELQEFIE 489


>gi|86751552|ref|YP_488048.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574580|gb|ABD09137.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 593

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/541 (20%), Positives = 204/541 (37%), Gaps = 75/541 (13%)

Query: 40  DSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--- 94
           D +L++L  N  + +   +    LG+Y    TAQ L     +    L      G++    
Sbjct: 8   DDILLSL--NHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGDKHGIK 65

Query: 95  ---DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              + V   P W    +R I  G +       F       A       L+  + +  G  
Sbjct: 66  LAHNAVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNMAFGLC 125

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              ++++   +    +  + + +  K+ S E+  T             + LTE + G+D+
Sbjct: 126 PLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGT-------------MQLTEPQAGSDV 172

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260
            A+ ++ ++ +DG Y + G K F++    D        +LA++         +  FL+P+
Sbjct: 173 GALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPK 232

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
            L +     G+ N +    +++K+G  ++ T  ++  +     G+L+G+ N     +  M
Sbjct: 233 FLVNADGTLGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTM 292

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIA 363
                L   +  V     +  +A+ YA+ R               +I  P +KR +  + 
Sbjct: 293 MNQARLGVGLEGVGIADRAYQQALAYAQERKQGRAIGSDSKGSDPIIKHPDVKRTLLLMR 352

Query: 364 LDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAME 417
               AA  + +  A + D A   S+       AA A ++ PI K +   +   V +  ++
Sbjct: 353 ALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTDIGTEVASLGVQ 412

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL--- 472
             GG G+IEE   A+HYR++    I  G+       L    L  +G      L   L   
Sbjct: 413 IHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSII 472

Query: 473 ----EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI------ALASSAAALYRAGM 522
               E     +       LRD++         +R+L EK+      ALA +   L   G 
Sbjct: 473 VKDVEASNDPAFGATGVRLRDALGALDRT---SRYLLEKLGASPNDALAGATPYLRLFGS 529

Query: 523 N 523
            
Sbjct: 530 T 530


>gi|149924253|ref|ZP_01912626.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149814878|gb|EDM74443.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 383

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 132/372 (35%), Gaps = 30/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P     L  +   GL           V         A      A       M  
Sbjct: 32  DRDHSFP--KESLAEAAELGLLGINVPADLGGVEAGAVAYSLAITELARACAATTVAMCV 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S   A +V          +  PK+ S EY            V  G  L+E   G+D  A+
Sbjct: 90  SNMVAEVVNHFGNADQRSEHVPKLCSGEY------------VVGGFALSETGAGSDPGAM 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +K   G        W  S   +  F++ A+     G   +   L  G   G+   +
Sbjct: 138 TTKARKTDKGWVLDGSKLWITSGTDAGLFVVWARTSDAPGTKGISCFLVPGDAPGVTRGK 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
            + K+G R + T  LEF       LG+  +         I ++ LD   + ++ + + + 
Sbjct: 198 AEEKMGQRGSPTTALEFEGV---ELGEEALLGELERGFPIAMMALDGGRIGIASLALGVG 254

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            A       YA  R   G  +     ++  +AD   +++AA  L+ R A+  D  +  + 
Sbjct: 255 LAASEFANKYASERKQFGRPINSFQALQWYMADSHTELSAARLLTLRAASLKDAKQPFTR 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA+ A       K +  + A      A++ +GG GY ++  + R+ R+     I  G+  
Sbjct: 315 EASMA-------KLYSSEKAFQACNRALQMLGGYGYTQDFPVERYLRDVRVTMIYEGTSE 367

Query: 449 AMVLDVLNLLEK 460
              L +   + +
Sbjct: 368 VQRLVIGRDITR 379


>gi|254237267|ref|ZP_04930590.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719]
 gi|254243601|ref|ZP_04936923.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192]
 gi|126169198|gb|EAZ54709.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719]
 gi|126196979|gb|EAZ61042.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 184/498 (36%), Gaps = 60/498 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWHALLR 108
            +L  L E V + TA  +   A   T     P        G +W+   V     +    R
Sbjct: 26  AQLPALAEVVDAETAAAILEEAGKVTAGTIAPLNRPGDEEGCQWNAGAVSTPAGFPEAYR 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MT 166
                G      D ++  +   +   I A    L+        + P +T+ + +AL    
Sbjct: 86  TYAEGGWVGVGGDPTYGGMGMPK--VISAQVEELVNSANLSFGLYPMLTAGACLALNAHA 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y
Sbjct: 144 SDELKDKYLPNMYAGIW-------------AGSMCLTEPHAGTDLGIIRTRAEPQADGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            +SG K F++    D       ++LA++         +  FLVP++L +     G  N L
Sbjct: 191 KISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVNADGSLGEKNSL 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  + F    G+L+G++N     +  M     L   I  ++    
Sbjct: 251 GCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKGLAAMFTMMNYERLGVGIQGLATGER 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   AI YAR R  S               +I  P ++R +  +        A S  +A 
Sbjct: 311 SYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAM 370

Query: 379 SFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D AK      +R        ++ P+ K +   M         +  GG G+I E    +
Sbjct: 371 QLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGHGFIREWGQEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
             R+     I  G+     LD++   ++  G          ++  + S+ + +    +  
Sbjct: 431 LVRDCRITQIYEGTNGIQALDLVGRKVIGSGGAFSRHFTDEIKAFVASADEALGEFSKPL 490

Query: 491 ISLCKEDKGLARFLTEKI 508
            +  +  + L  +L ++ 
Sbjct: 491 AAAVENLEELTAWLLDRA 508


>gi|225713624|gb|ACO12658.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Lepeophtheirus salmonis]
          Length = 408

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 78/384 (20%), Positives = 154/384 (40%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  DK   +P     ++     GL        +             A  Y +A  E 
Sbjct: 49  PKAKLIDKEHRYPE--ECVKAMGELGLMAINTPEEYGGSGLG-------AMEYAIAMEEI 99

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +++ V L     ++ D   K  + E       P+   +     GLTE   G
Sbjct: 100 SRGC-----ASNGVILSAHNSLYLDPINKNGTHEQKEKYVTPLTDGNQIGCFGLTEPGNG 154

Query: 209 TDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  A ++  +   DG  Y L+G K W  ++P +   ++ A    ++    +   +   S
Sbjct: 155 SDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKGITAFIVPKS 214

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + ++K+G R ++T  +   +    ++   NV  G     KI +  LD   + V
Sbjct: 215 IPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGFKIAMQTLDGGRIGV 271

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +A+     A+ YA +R   G  +    +++  IAD+A+ + A+  L +R A + 
Sbjct: 272 AAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRVEASRLLLYRAAAAK 331

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAA        TK +  + A  V  ++++ +GG G++ +    R+YR++   
Sbjct: 332 DAGMPYTKEAAM-------TKLFASETATWVAHQSIQVLGGMGFVTDMPSERNYRDARIT 384

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            I  G+     + + + + K   L
Sbjct: 385 EIYEGTSEIQRIVIASNIMKEYGL 408


>gi|167031416|ref|YP_001666647.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857904|gb|ABY96311.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/558 (18%), Positives = 193/558 (34%), Gaps = 68/558 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWHALLR 108
            +L  L E V + TA  +   A   T     P   A    G  WD   V     +     
Sbjct: 26  AQLPALAEVVDADTAMAVLEEAGKVTAKTIAPLSRAADEEGCHWDNGAVRTPAGFIEAYN 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      D  F  +   +A   +   +   + L  G     +  +   +    + 
Sbjct: 86  TYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ALKEKYLPNMYAGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKV 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP+ L +     G+ N    
Sbjct: 193 SGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGSLGARNPATC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+++G+ N     +  M     L   I  ++    S 
Sbjct: 253 GSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLASAERSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YAR R  S               +I  P ++R +  +   I    A S  +A   
Sbjct: 313 QNAVEYARDRLQSRAPTGPQAKDKAADPIIVHPDVRRMLLTMKALIEGGRAFSTYVAMQL 372

Query: 381 DEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D AK       R        ++ P+ K +   +         +  GG GYI E    +  
Sbjct: 373 DSAKYSEDANVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R+     I  G+     LD++   ++  G   +      + Q + S+   +    +    
Sbjct: 433 RDVRITQIYEGTNGIQALDLMGRKVVASGGAYYRLFSDEIRQFIASADGALDEFAKPLAV 492

Query: 493 LCKEDKGLARFLTEKIAL----ASSAAALYRAGMNDIADVFLENRF--------LDNCHS 540
              +  GL  ++ E+         +A+  Y      +A  ++             D    
Sbjct: 493 CLDQLDGLTEWVLEQAKGNPNEIGAASVEYLHAFGYVAYGYMWALMARAAKAGEGDEAFY 552

Query: 541 THCMLHGRFNAAHIIDSL 558
           +  +   RF  A ++  +
Sbjct: 553 SGKLGTARFYFARLLPRV 570


>gi|291403234|ref|XP_002718028.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase [Oryctolagus
           cuniculus]
          Length = 423

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 127/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++    G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDQSNEFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLIVYAKTDMAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L + +  G    +  +K+G R + T EL F +       +LG +      +     L  L
Sbjct: 226 LVEKNMPGFSTSKKLDKLGMRGSNTCELIFEDCNVPAANVLGHVGKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|262278703|ref|ZP_06056488.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259054|gb|EEY77787.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 600

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/530 (16%), Positives = 185/530 (34%), Gaps = 64/530 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    +  A         ++      G   ++  V     +    ++    G     
Sbjct: 37  RELIDQYLEAAADFCENELAPINQNGDQEGCHLNQGVVTTPKGFKEAYQKYAELGFTSLT 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  +         +I  + +   +          S  +   +    T +  + +  K+ 
Sbjct: 97  ADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYQGLSHGAMRTIEHHGTEQQKQQFLTKLI 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +   DG Y ++G K F+S+  
Sbjct: 157 SGIWTGT-------------MCLTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGE 203

Query: 240 SD-----AFIMLAQV------EGRVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRS 283
            D       I+LA++         +  F+VP+   D        N +    +++K+G   
Sbjct: 204 HDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVDDEGNLQDRNQVVCSAIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  L F    G+L+G  N     +        + +A+  ++   +S   A+ YA+ R 
Sbjct: 264 NATCVLNFDGAQGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++  +           AL++ LA   D  +S +++  
Sbjct: 324 AMRSLSGPKYPEKNADPIIVHPAVRSMLMTQKAFAEGGRALAYFLAQHVDIVESSADQEQ 383

Query: 392 ------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     + PI K +  +         ++  GG G+I E  + +  R++  +++  G
Sbjct: 384 QKQSDNLLAFLTPIAKAFLTESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEG 443

Query: 446 SGNAMVLDVL---------NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLC 494
           +     LD+L          LL+  T+L +Q     +    L    +K+  + +  +SL 
Sbjct: 444 TTEIQSLDLLARKVLNSEGKLLKNMTDLIDQFILQHQANVALKPYLEKLGELKQQWLSLT 503

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                 A+  +E+I    +A+  Y    + +   +L  R     H    +
Sbjct: 504 TTIAEKAKHNSEEI---GAASVDYLYFSSYVVFAYLWARMAQVAHEKLAL 550


>gi|237802421|ref|ZP_04590882.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025278|gb|EGI05334.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 601

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 181/502 (36%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DLAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ +       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFISAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 ------------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                       S   +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKSADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQGNEGNEAVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|229085274|ref|ZP_04217516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
 gi|228697993|gb|EEL50736.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44]
          Length = 569

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 161/424 (37%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEQHNYQVSRQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      DG         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLSEDGTTWTLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQKELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDDAIH 331

Query: 386 RSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E+         +   I K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDESIMQKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVI---TILRDSISLCKE 496
            I  G+     L V  +L K T  L +Q+     +++  + + ++    +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKETKSLGDQVEEDTFENVERNHRYILLSKQLLKQSLKTLSQ 451

Query: 497 DKGL 500
              L
Sbjct: 452 TPEL 455


>gi|170740557|ref|YP_001769212.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194831|gb|ACA16778.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 390

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 142/395 (35%), Gaps = 27/395 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R +     Q     P  E  D+    P    L       GLH    +  +  +
Sbjct: 14  GETADAIRDSVRAFAQ-DRIAPRAEEIDRTNTFP--RDLWPEMGALGLHGITVEEEYGGL 70

Query: 128 VRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G    + S    + +    +    + + P + S E+   
Sbjct: 71  GLGYLEHCVAMEEVSRASASVGLSYGAHSNLCVNQIRRNGSAAQKRKYLPTLISGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++ ++ +K  D         W  + P+++  ++ 
Sbjct: 128 ----------VGALAMSEPGSGSDVVSMRTRAEKRGDRYVLTGSKMWITNGPVAETLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ + + G   +   L +    G    +  +K+G R + T EL F          L    
Sbjct: 178 AKTDPQAGPRGITAFLVEKGMKGFTTAQKLDKLGMRGSDTCELVFEECEVPEENVLGEVG 237

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             V  +   +  + A+++   +  M+  L  A+ Y   R   G  + +  +++  +AD+ 
Sbjct: 238 RGVNVLMSGLDYERAVLAAGPLGIMQACLDVALPYVHERKQFGQPIGEFQLVQGKLADMY 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +   AA A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+G
Sbjct: 298 VSTNAAKAYVYAVAKACDRGETTREDAAGA-------ILYAAERATQCALDAIQLLGGNG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +    R  R++    I  G+     + +   L
Sbjct: 351 YINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|126278376|ref|XP_001381068.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase
           [Monodelphis domestica]
          Length = 422

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 127/375 (33%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+    P      ++  + G+        +         H I    +   +   
Sbjct: 62  PKAHEIDQNNEFPDLRKFWKQLGNLGVLGITAPAQYGGSDLGYLDHVIVMEEMSRASAAI 121

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 122 GLSYGAHSNLCVNQLVRNGNEAQKEKYLPKLISGEH-------------IGALAMSEPSA 168

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   + + 
Sbjct: 169 GSDVVSMRLKAEKKGDYYILNGTKFWITNGPDADVLIVYAKTDPVAVPVSRGITAFIVEK 228

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAI 322
           +  G    +  +K+G R + T EL F N    +   L   +  V  +     L  L  A 
Sbjct: 229 NMPGFSTCKKLDKLGMRGSNTCELVFENCKVPVSNILGHLSKGVYVLMSGLDLERLVLAG 288

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   +  +    + +A + DE
Sbjct: 289 GPLGIMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLTTSRQYVYNVAKACDE 348

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +  + A  V  + ++C+GG+GYI +  + R  R++    I
Sbjct: 349 GHHSPKD-------CAGVILYAAESATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI 401

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 402 GAGTSEIRRLVIGRA 416


>gi|222109369|ref|YP_002551633.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728813|gb|ACM31633.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 385

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 134/365 (36%), Gaps = 26/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++     GL        F  +      + R    L   A      + +     +  + +
Sbjct: 40  IVQEMRELGLFGMTIPEKFGGLELTMEEECRVLFELCQTAPAFRSIIGTTVGIGSQGILM 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W PK+ + E             V     LTE   G+D A++ +   K  D 
Sbjct: 100 DGTPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKDGDH 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++P +  F ++A+      G   V   + D    G+ + +   K+G R 
Sbjct: 147 YIVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIVDAKTPGISFGKYDKKMGQRG 206

Query: 284 NATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N          L    G    MK+L    +  A ++V   +  L +A+ YA
Sbjct: 207 AHTCDVIFDNVKVPAANLIGLQEGRGFKTAMKVLEKGRIHIAAVAVGVAQRILRDALAYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S E       A  
Sbjct: 267 LERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTE-------ASC 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +M   V   A++ +GG+GY+ E  I R YR+     +  G+     + +   + 
Sbjct: 320 AKMFATEMCGRVADRAVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQIIIARNMV 379

Query: 460 KGTNL 464
           +    
Sbjct: 380 REARA 384


>gi|156976705|ref|YP_001447611.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116]
 gi|156528299|gb|ABU73384.1| hypothetical protein VIBHAR_05480 [Vibrio harveyi ATCC BAA-1116]
          Length = 389

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 139/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L  +    GL     D  F        AH +    +   
Sbjct: 29  EHIAPIASDIDRDNQFP--NHLWSKFGEMGLLGVTVDEEFGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    +P   + + PK+    +                L ++
Sbjct: 87  SAPVALSYGAHSNLCVNQIFRNGSPAQREKYLPKLIDGSH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNSGSDVVSMQLRAEDKGDHYLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  +K+G R + T EL F +       +LG+LN     +        +  
Sbjct: 194 EREFEGFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  + E + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMNAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMSLDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|75674835|ref|YP_317256.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74419705|gb|ABA03904.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/548 (20%), Positives = 200/548 (36%), Gaps = 76/548 (13%)

Query: 46  LIANFPSVVHKELEL-----LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           L+A   + +   +E          + +   +E  R A+     L+      G R    +V
Sbjct: 11  LLALDGAGLRAAVEAGHYGDFDAEITTVVLEEAGRFASDVLAPLNRAGDRHGARLQDGRV 70

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P W    RR    G +       F       A       ++  A    G     +++
Sbjct: 71  TTAPGWADAYRRWTAAGWNAVSGPEDFGGQGLPLAINAACTEIWSAANTAFGLCPLVTLS 130

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +A   +  +   +  K+ S E+  T             + LTE + G+D+ A+ S+
Sbjct: 131 AVEALAAHGSDTLKTIYLGKLVSGEWTGT-------------MQLTEPQAGSDVGALRSR 177

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            ++ SDG Y + G K F++    D        +LA++         +  FL+P+ L D  
Sbjct: 178 AERASDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGTRGISLFLIPKFLVDAD 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G   + T  +   +     G+L+G+ N     +  M     L
Sbjct: 238 GSLGARNDIHASGIEHKLGIHGSPTCTMTMGDDGGAIGYLIGEENRGMRCMFTMMNQARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAAT 370
              +  V     +  +A+ YAR R              +I  P +KR +  +    AAA 
Sbjct: 298 CVGLEGVGIAERASQQALAYARERRQGRAAGTSDGMSPIIAHPDVKRMLMQMRALTAAAR 357

Query: 371 ALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A+ +  A S D A        R+  AA   ++ PI K +   +   V +  ++  GG G+
Sbjct: 358 AICYATAVSLDMAARAADPDVRTAAAARGALLTPIAKAFSTDIGNEVASLGIQVHGGMGF 417

Query: 425 IEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL-------EQD 475
           IEE   A+HYR++   SI  G+       L    L          L   L       E  
Sbjct: 418 IEETGAAQHYRDARITSIYEGTNGIQAIDLVTRKLAADDGAAVSALLDELSDTVKRVEAS 477

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKI------ALASSAAALYRAGMN----DI 525
              +       LRD++   +      ++L E++      ALA +   L   G       +
Sbjct: 478 NDPAFGTTGERLRDALGSLERA---GKWLLERLESSPNDALAGATPYLRLFGSTLGGCKL 534

Query: 526 ADVFLENR 533
           A+  L  R
Sbjct: 535 AEEALAAR 542


>gi|157692556|ref|YP_001487018.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157681314|gb|ABV62458.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 380

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 132/375 (35%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    PA     ++    GL    +   +        ++ +    +       
Sbjct: 26  PLAQTIDEQAVFPA--QTFQKMGELGLMGIPFPEKYGGSGGDTISYALAVEEIGKQCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +     AS +    T     D    + S              +     GLTE   
Sbjct: 84  GLSYAAAVSLGASPLYYFGTEEQKMDHLVPLASG-------------TALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D     ++  K            W  ++  +   I+ A  +    G  ++   + +  
Sbjct: 131 GSDAKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTAVSDHDEHGRPIISAFIVEKG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL      +K+G R + T E+   N       +LGD N              +  A +
Sbjct: 191 QKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHILGDPNKGFKQFLYTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L  ++ YA+ R   G  L     ++  +AD+A+ I  A  + ++ A   D  
Sbjct: 251 SVGIAQAALDASLSYAKERKQFGQTLSSFQAIQFKLADMAMQIELARQMVWKAAWLKDHG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  ++EAAYA       K +  +MA     +A++  GG+GY++E  + R  R++    I 
Sbjct: 311 KPFTKEAAYA-------KLFASEMATKASLDAVQIHGGTGYMKECGVERLVRDAKLMEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 364 EGTSEIQRLVIARQL 378


>gi|163761042|ref|ZP_02168120.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281823|gb|EDQ32116.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 593

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/509 (19%), Positives = 188/509 (36%), Gaps = 70/509 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+      G   +   V   P W  L R  I  G + 
Sbjct: 31  LGEDLVDAILAEAGRFATDQIAPLNEIGDTHGAVLEDAAVTTPPGWKELYRNWIDGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                 F          +  A L +         + P++T  ++ AL    T  +   + 
Sbjct: 91  LTGPEEFGGQGLP--MLLSVAALEMWNSGSLAFGIGPTLTMGAVEALEKHATDELKARYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            ++ + E+  T             + LTE + G+D+ A+ ++ + + DG Y + G K ++
Sbjct: 149 EQLVTGEWMGT-------------MNLTEPQAGSDLNALKARAEPVGDGTYRIFGQKIYI 195

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D       ++LA++         +  FLVP+         G+ N +    L++K+
Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRGISLFLVPKFFVGDDGSLGARNDVFCSGLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G  ++ T  + + +          G+L+G+ N     +  M     L   +  V+    +
Sbjct: 256 GIHASPTCTMIYGDGKFGDQPGAIGWLIGEENRGLACMFTMMNNARLAVGMQGVAIAETA 315

Query: 332 LAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
             +A+ YAR R               +I+ P + R +  +      A A+ +  A + + 
Sbjct: 316 YQKALAYARERTQGRAPGFKGEGMSPIIEHPDVARMLMTMKALTQGARAICYSCAEALEL 375

Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E       A  A ++ PI K +   +   V +  ++  GG G+IEE   AR+ R++
Sbjct: 376 ARVSEGDEAKAWAERASLITPIAKAFATDIGMEVASLGVQVHGGMGFIEETGAARYLRDA 435

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               I  G+       L +  L   G +  + L S  + D  ++            S   
Sbjct: 436 RIAPIYEGTNGIQAIDLVMRKLPLSGGDTVKALISDFKADAEAAR----------ASNAP 485

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMND 524
              G+A  L   IA   +A A  +  +++
Sbjct: 486 RLDGVAEHLDAAIADLETATAYLQLAISE 514


>gi|119897993|ref|YP_933206.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670406|emb|CAL94319.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 599

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/503 (20%), Positives = 195/503 (38%), Gaps = 73/503 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---VEFHPAWHALLRRSIHDG 114
           E +   ++    +E  + A      L+      G +W +   V   P W    R+    G
Sbjct: 31  EEVSPDLVDAILEEAGKFAGGVLAPLNRIGDEEGAKWSQGGVVTTVPGWREAYRQFCEAG 90

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
                 +  F      +   I  A + +         + P +T+ ++ AL          
Sbjct: 91  WPALAGEPEFGGQGLPK--LISTAVMEMWKSANMAFSLCPMLTTGAIEALLLRGNDEQKA 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K
Sbjct: 149 MYLPKMVSGEWTGT-------------MNLTEPQAGSDLAAVRTRAEPQGDGTYRIFGQK 195

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    D       ++LA++         +  F+VP+ + +     G+ N +    ++
Sbjct: 196 IFITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVVPKFMVNADGSLGARNDVECVSIE 255

Query: 277 NKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G  ++ T  L F +     G L+G+ N     +  M         +  ++    +  
Sbjct: 256 HKLGIHASPTCVLAFGDKGGAIGTLVGEANRGLEYMFIMMNEARFAVGMEGLALSERAYQ 315

Query: 334 EAIHYARRRHVS------GGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            A+ YA+ R         GG    +I    ++R +  +     A  AL++ +  + D A 
Sbjct: 316 HALAYAKDRVQGTEAGVRGGPKVSIIHHADVRRMLMSMKSQTEAMRALAYVVGAATDLAH 375

Query: 385 SRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++EA      A+  +M P+ K WC + +  + +  ++  GG G+IEE   A+H R++ 
Sbjct: 376 HHADEAVRASNQAFVDLMIPVVKGWCTENSIEIASTGVQVHGGMGFIEESGAAQHLRDAR 435

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
             SI  G+      D++                + ++ G + K VI  +R   +   E  
Sbjct: 436 ITSIYEGTTAIQANDLIG-------------RKIARENGVTIKSVIAEMRSVGAKLAEGD 482

Query: 497 DKGLA---RFLTEKIALASSAAA 516
           D+ LA   R L   I     A A
Sbjct: 483 DEALAAIGRALHAGIEALEQAVA 505


>gi|3212539|pdb|1IVH|A Chain A, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212540|pdb|1IVH|B Chain B, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212541|pdb|1IVH|C Chain C, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
 gi|3212542|pdb|1IVH|D Chain D, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6
           Angstroms Resolution: Structural Basis For Substrate
           Specificity
          Length = 394

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 30  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 89

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 90  SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 136

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 137 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 196

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 197 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 256

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 257 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 316

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 317 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 369

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 370 LYEIGAGTSEVRRLVIGRA 388


>gi|258511563|ref|YP_003184997.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478289|gb|ACV58608.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 593

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 79/471 (16%), Positives = 175/471 (37%), Gaps = 39/471 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +    ++  +   +                     + +      +  
Sbjct: 64  KLLRKAADLGLLSAEVPEAYGGLGLDKVSATLINEHVSRGGSFGLSFGAHTGIGTLPIVY 123

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K + PK+ S E+                  LTE   G+D  +  +  +   DG
Sbjct: 124 FGNEEQKKKYLPKLASGEW-------------IGAYCLTEPNSGSDALSARTTAKLSEDG 170

Query: 225 -IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K ++++   +D F++ A+V+G+         + + +  G+ +   + K+G +
Sbjct: 171 KYYILNGTKQYITNAGFADVFVVYAKVDGQH----FSAFIVERTMPGVSFGPEEQKMGIK 226

Query: 283 SNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++   +    +     ++        ++  +        ++ G +V+L  +  YA
Sbjct: 227 GSSTRQVILEDVKVPVENLLFEVGKGHQIAFNILNIGRFKLGAGALGGSKVALETSAKYA 286

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
             R   G  L + P+++R +A +   I A  ++ +R A   D                 +
Sbjct: 287 NERKQFGKKLSEFPLIQRKLARMNTQIYALESVVYRTAGLLDAILETVDVTKPDSGVQSA 346

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   I K +  ++   V+ EA++  GG+G+I+E  + + YR++  N I  G+ 
Sbjct: 347 KAIAEYAIECSINKVFGSEVLDFVVDEAVQIHGGAGFIKEYGVEQMYRDARINRIFEGTN 406

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               + +   + +     E       Q L +   +++  L     +  E+K L   + +K
Sbjct: 407 EINRMLIPGTMLRRAMKGELPLFQKAQALQAELMQMVPGLTPPGGVLAEEKQLIENM-KK 465

Query: 508 IALASS--AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           + L     AA   +A +ND  +  +     D              A   ++
Sbjct: 466 VFLMVGGLAAQALQARVNDEQE--ILANLADIAIQAFAAESAYLRAMQQVE 514


>gi|299134749|ref|ZP_07027941.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590559|gb|EFI50762.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 594

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/487 (19%), Positives = 185/487 (37%), Gaps = 56/487 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSI 119
               S   +E  + A+     L+      G   + +KV   P W    +     G +   
Sbjct: 34  ADTASAVIEEAGKFASEVLAPLNRVGDEHGATLKDNKVTTSPGWRDAYKGWAEAGWNSLT 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               F          + AA   + +       + P +T+ ++ A+       + + +  K
Sbjct: 94  GAEEFGGQGLPI--VLHAACSEIWSAANMAFGLCPLLTAGAIEAISVHGADDLKQTYLAK 151

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+ A+ ++ +K  DG Y LSG K F++ 
Sbjct: 152 LISGEWTGT-------------MQLTEPQAGSDVGALRTRAEKQPDGSYRLSGTKIFITY 198

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++ G       +  F+VP+ L +     G+ N +    L++K+G 
Sbjct: 199 GDHDMTGNIVHLVLARLPGAPEGTKGISLFVVPKFLVNADGSLGARNDIYASGLEHKLGI 258

Query: 282 RSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + T  +   +     G+LLG+ N     +  M     L   +  V     +  +A+ Y
Sbjct: 259 HGSPTCTMTMGDKGGAVGYLLGEENNGMACMFTMMNQARLGVGLEGVGIAERATQQALAY 318

Query: 339 ARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EA 383
           A  R               +   P +KR +  +    AAA  + +  A + D      + 
Sbjct: 319 AHERKQGRALGHKGGEPDPIAVHPDVKRNLLTMRALTAAARTICYATAVAIDISHEAKDE 378

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +R +  A A ++ P+ K +   +A  V A  ++  GG+G+IEE   A++ R++   +I 
Sbjct: 379 TAREKADARAGLLTPLAKAFSTDIANEVAALGVQVHGGAGFIEETGAAQYVRDARILTIY 438

Query: 444 LGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
            G+       L +  L          L   LEQ +             + ++ +E  G A
Sbjct: 439 EGTNGIQANDLVMRKLGADKGAAVRDLLDELEQIVTRVEASNDPAFGATGAILREAIGSA 498

Query: 502 RFLTEKI 508
              +E +
Sbjct: 499 ARASEWL 505


>gi|189192472|ref|XP_001932575.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187974181|gb|EDU41680.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 428

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 141/390 (36%), Gaps = 27/390 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R DK    P  + + ++    G      D  F  +    QAH
Sbjct: 56  EFARREIPE-----EIAARTDKQNEFP--NDMWQKFGEAGFLGITADEEFGGLAMGYQAH 108

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L   +        + S    + + L         + P + S             
Sbjct: 109 CVVMEELSRASGSIGLSYAAHSQLCVNQLMLNGNAAQKAKYLPGLISG------------ 156

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                GL ++E   G+D+ ++ +  +++  G        W  + P +   ++ A+ E   
Sbjct: 157 -KKIGGLAMSEHSAGSDVVSMKTTAKEVDGGYLLNGTKMWITNGPDAHTIVVYAKTEPTA 215

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   + D +  G       +K+G R + T EL F N F     +LG++N     + 
Sbjct: 216 ASKGITAFIVDTATTGFSVASKLDKLGMRGSNTGELVFENVFVPRENILGEVNRGVRVLM 275

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+ SL   + Y  +R   G  +    +++  +AD+     A+ 
Sbjct: 276 EGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRASQ 335

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A ++ +A + DE+ +  +              +  + A  V A+A++ +GG GY+ E  +
Sbjct: 336 AFTYSVARAVDESHASPD---IKTQDCAGAILYAAERASEVAADAVQLMGGMGYMNEVPV 392

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R  R++    I  G+     + +     +
Sbjct: 393 GRILRDAKLYEIGAGTSEVRRMVIGRAFNR 422


>gi|241766504|ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363274|gb|EER58824.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 388

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 77/406 (18%), Positives = 144/406 (35%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +  A+ A           P    WD+    P     + ++   G        
Sbjct: 2   DFELTEEQRAFAQTAREFAE--GQLAPHAAHWDEEGIFP--REAIAKAGELGFCGLYAPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +                    ++    +  M+    TP V   W P + + E
Sbjct: 58  AAGGLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATPAVRDHWGPLLTTGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                              LTE   G+D A++ ++ + +    Y ++G K F+S   S D
Sbjct: 118 -------------KLASYCLTEPGAGSDAASLKTRAELVG-HEYVINGSKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  +   G   +   +      G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVLMARTGDASSGAAGISAFVVPADAPGISYGKKEQKMGWNSQPTRTISFDNVRIPADH 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L  A  Y + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V+ EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFNVVNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 338 LHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIGRRMLDGDA 383


>gi|289674344|ref|ZP_06495234.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae FF5]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/493 (18%), Positives = 172/493 (34%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSVGERNAVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQA 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R      A ++ P++K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLAALLTPVSKAFLSDIGLETTIHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N  L++     + Q +  S   +    +      
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGALYQLFSDEVRQFINGSSNVLSEFTQPLSKAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|312958955|ref|ZP_07773474.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311286725|gb|EFQ65287.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 378

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 131/375 (34%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           D   FH  W         L R++   G+ CS     +  +     +            L 
Sbjct: 25  DAAPFHGQWEKQGYIDRELWRKAGEAGMLCSHLPEGYGGLGADFLYSAVVIEEISRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +  +   + PK+ + +                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSEALKHKYLPKLIAGDM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++   +D  I++A+ + + G       L    
Sbjct: 132 GSDLQGVKTSAVLDGDE-YVINGSKTFITNGYLADLVIVVAKTDPKAGAKGTSLFLVQAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F +       LLG   +    +        L  AI 
Sbjct: 191 TPGFAKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQELPQERLTVAIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S    +L   + Y R R   G  + D    +  +A++A +I              D+ 
Sbjct: 251 ALSSAEAALQWTLEYTRERKAFGKAIADFQNTRFKLAEMATEIQIGRVF-------IDQC 303

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   +       A + KYW   +   V+ E ++  GG G++ E  IAR + ++    I 
Sbjct: 304 MALHLQGRLDVPTAAMAKYWATDLQCKVLDECVQLHGGYGFMWEYPIARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARAL 378


>gi|254563431|ref|YP_003070526.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
 gi|254270709|emb|CAX26714.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
          Length = 587

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/535 (19%), Positives = 208/535 (38%), Gaps = 71/535 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAW 103
           +A   +V+ +    +G        +E  R+A      L+      G  +   +V   P W
Sbjct: 17  VAGLEAVLAQSGAEIGPDDAVAILEEAGRLAGNVIAPLNRIGDRHGTPFSDGRVTTAPGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +  R  +  G +  +    +        H I AA   +         + P +T+  + A
Sbjct: 77  ASAYRAFVEGGWNGVLAAPDYGGQGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGVEA 134

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    +  +   +  K+ S E+                + LTE + G+D++A+ ++ +  
Sbjct: 135 LAAHGSDELKGRYLEKLVSGEW-------------TATMNLTEPQAGSDLSALRTRAEPN 181

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K +++    D       ++LA+++        +  FLVP++L DGS N L
Sbjct: 182 GDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPAGTRGISLFLVPKVLPDGSRNDL 241

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               L++K+G  ++ T  + F +     G+L+G+ N     +  M     L+  +  V  
Sbjct: 242 RCSGLEHKLGIHASPTCSMAFGDAGGATGWLIGEENRGLACMFTMMNSARLNVGLQGVGV 301

Query: 328 MRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              ++    ++R +  +    AA+  + +  A  
Sbjct: 302 AEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQRTLLTMKAYTAASRGICYLTAQG 361

Query: 380 FDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++
Sbjct: 362 LDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMRDA 421

Query: 438 PANSILLGSGNAMVLDVL------------------------NLLEKGTNLFEQLFSTLE 473
               I  G+     +D++                         LL+ GT  F    + L 
Sbjct: 422 RILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIASMRRVAEGLLKDGTPGFGHAAARLR 481

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSAAALYRAGMNDIA 526
           + +G S  +  + L  +++  +  + L  A        L   AA L  AG+   A
Sbjct: 482 EGIG-SLDRATSFLLKALASNRPQEALPGATPYLRLFGLVQGAACLATAGLASSA 535


>gi|226225961|ref|YP_002760067.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089152|dbj|BAH37597.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 385

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 126/363 (34%), Gaps = 31/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVA 163
           AL  +    GL        +            A   L  +    A  +   +      + 
Sbjct: 47  ALTAKFFELGLMGIELPEQYGGAGGSLMMVTLAVEELSKVDASAAIQVDVQNTLVNYPLN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T        P++ S                     L+E   G+D   + ++  +   
Sbjct: 107 RYGTDEQRARVLPRMTSN--------------TVGAYALSEPGSGSDAFGLATRADRAEG 152

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +   ++ F++ A  +   G   +   + +    G    + ++K+G R+
Sbjct: 153 GWTLNGSKAWITNGGEAEVFVVFANTKPEAGYKGITAFIVERDAKGFSVGKKEDKLGIRA 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T  L F N F     D NV     +  KI I  L+   + +    + +A+     A  
Sbjct: 213 SSTTSLHFENVFV---SDANVLGEVGQGYKIAIETLNEGRIGIGAQMIGVAQGALSAATA 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  L D   ++  +A  A ++ AA  + +  A   D  +  + E A A    
Sbjct: 270 YLKERKQFGKALADFQGIQFQVAQAATELEAARLMVYNAARLKDAGQDIAREGAMA---- 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V +  +E  GG GY  E  + + YR++   +I  G+ N  +  +   
Sbjct: 326 ---KLYASQMCERVTSLCVELFGGYGYTREYPVEKFYRDAKIGAIYEGTSNMQLQTIAKA 382

Query: 458 LEK 460
           + K
Sbjct: 383 VLK 385


>gi|302186018|ref|ZP_07262691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 592

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/493 (17%), Positives = 170/493 (34%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      R  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYRIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEEL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ ++ +DG Y ++G
Sbjct: 148 KTRFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAERQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSIGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA  R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK      +R        ++ P+ K +   +         +  GG GYI E    +  R+
Sbjct: 375 AKFSEDDTARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N   ++     + Q +  S   +    +      
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGSDNALGEFTQPLSKAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|302526280|ref|ZP_07278622.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435175|gb|EFL06991.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 384

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 132/401 (32%), Gaps = 34/401 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
              E  R A     +     P     D+ E  P   A     +    H       +    
Sbjct: 10  EDHEAIREAVRAVAE-EQIAPHAAEADEREEFP--KASYDALVASDFHAPHVTEQYGGAG 66

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                              +  + + +   +  + L     V   + P + S E      
Sbjct: 67  ADALATCIVIEEVARVCASSSLIPAVNKLGSLPLILAANEDVKAKYLPPLASGE------ 120

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                       GL+E+  G+D A++  +     D         W  ++  S+ + +LA 
Sbjct: 121 -------AGFSYGLSERDAGSDTASMRCRATPSGDDWILNGQKSWITNAGFSEYYTVLAV 173

Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  GR G   V   + + S  G  +   + K+G + + T EL F       +    +  
Sbjct: 174 TDPDGRRGAN-VTAFVVEKSDPGFSFGAKEKKLGIKGSPTRELLFDQVR---IPGDRIVG 229

Query: 307 GPVEDMKIL------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P + +KI         +  A  +V   + +L  A+ Y + R   G  + D   ++  +A
Sbjct: 230 EPGQGLKIALKTLDHTRVTIAAQAVGIAQGALDHALAYVKERKQFGKHIADFQGIQFMLA 289

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ +  A  + +  A   +                   K     +A +V  +A++ +G
Sbjct: 290 DMAMAVETARQMVYTAAAKSERGDDD------LSFFGAAAKCHASDVAMSVTTDAVQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G GY  +  + R  R++    I  G+     L +   L KG
Sbjct: 344 GYGYTRDFPLERMMRDAKITQIYEGTNQIQRLVMARQLLKG 384


>gi|34497539|ref|NP_901754.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103394|gb|AAQ59756.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
          Length = 386

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 144/383 (37%), Gaps = 25/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD     P    ++R+S   G        ++  +   +             
Sbjct: 22  HELAPHAAEWDAESLFPL--DVIRKSGDMGFLGLYTPEAYGGLGLSRLDSAIVFEELAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  ++     + M+A   + ++ + W PK+ + E             V     LTE
Sbjct: 80  CTSTAAYLTIHNMVSWMIASFGSKQLAEQWVPKMVTGE-------------VLGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++ ++ +K    +Y L+G K F+S   S   +++    G  G   +   +  
Sbjct: 127 PGAGSDAASLKTRAEKKG-EVYVLNGGKMFISGAGSTQVLVVMARTGGPGPKGISAFVVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y + + K+G  S  T  + F N    +   L     G    MK L    ++ A
Sbjct: 186 ADAPGVSYGKKEKKMGWNSQPTRAITFDNVEIPVANRLGEEGQGFAFAMKGLDGGRINIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  A  Y + R   G  L +   ++  +AD+  ++ AA  +    A   D
Sbjct: 246 TCAVGTAQAALNAAQRYVQERQQFGHPLAELQTVQFRLADMLTELVAARQMVRLAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A      +A A     + K     ++  +   A++  GG GY+++  + RH R+   + 
Sbjct: 306 NA------SADATAYCAMAKRLATDLSFNIANNALQLFGGYGYLQDFPLERHVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           IL G+   M + V   + +   L
Sbjct: 360 ILEGTNEVMRMIVGRKMLQDGAL 382


>gi|328854905|gb|EGG04035.1| hypothetical protein MELLADRAFT_49293 [Melampsora larici-populina
           98AG31]
          Length = 426

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 78/445 (17%), Positives = 162/445 (36%), Gaps = 61/445 (13%)

Query: 21  SLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
           +    NQ         ++ D  +   +A              E V+S   +E+       
Sbjct: 35  TSSDFNQSKPTSLY-TFTEDESMFKDLA----------SKFAEEVVSPKVREMDE----- 78

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
                          K E  P    +++    +G         F          I     
Sbjct: 79  ---------------KEEMDP---EIVKGLFDNGFMGIEIPEDFGGSGASFMSAILVIEE 120

Query: 141 YLMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                     +     T A + +    +P++ +   PK+               TS    
Sbjct: 121 LAKVDPSVSLICDVHNTIASTTIRNYGSPKLLEKHLPKL--------------ATSKVAC 166

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A+ ++  K S+G Y ++G K ++++   ++ F++ A ++ + G   +
Sbjct: 167 FCLSEPSSGSDAFALKTKVTKDSNGNYVVNGSKMWITNSKEAEIFVVFANLDPQKGYKGI 226

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              L +    G+   + + K+G ++++T  L F N       L+G+         ++   
Sbjct: 227 CCFLVEKEM-GVQVAKKEQKLGIKASSTCTLNFDNVVVPKENLIGEEGKGYKYAIEILNE 285

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A   +   + +  +++ Y  +R   G  + +   M+   ADI  +I AA  L++ 
Sbjct: 286 GRIGIAAQMIGLAQGAFDKSVSYTYQREQFGRPIGEFQGMQFQFADIQTEIEAARLLTYN 345

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +E+K  +E       MA + K +  ++A      A+E  GG G+  E  I +++R
Sbjct: 346 AARLKEESKPFTE-------MAAMAKLFSSEVAQRASGSAIEWCGGVGFTRETGIEKYWR 398

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   +I  G+ N     +   + K
Sbjct: 399 DSKIGAIYEGTSNIQRSTLAKFIAK 423


>gi|113866198|ref|YP_724687.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113524974|emb|CAJ91319.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 393

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 139/386 (36%), Gaps = 26/386 (6%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           ++   +L    P     D+ +  P  AW  +    +   L  ++ +      +   AH I
Sbjct: 24  DWAQAELA---PRAGEIDRTDQFPMDAWKKMGDLGV---LGITVAEEYGGANMGYLAHMI 77

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
               +   +        + S    + +    TP     + PK+ S E+            
Sbjct: 78  AMEEISRASASVGLSYGAHSNLCVNQIHRNGTPAQKAKYLPKLVSGEW------------ 125

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
               L ++E   G+D+ ++  + +   D         W  + P  D  ++ A+ E  +G 
Sbjct: 126 -IGALAMSEPNAGSDVVSMKLRAEFKGDRYVLNGTKMWITNGPDCDVLVVYAKTEPELGA 184

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    G    +  +K+G R + T EL F +    +   L    G  + +   
Sbjct: 185 RGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPVENILGAENGGAKVLMSG 244

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           +  + A++S   V  M+  +     Y   R   G  + +  +++  +AD+   + AA + 
Sbjct: 245 LDYERAVLSGGPVGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSY 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +  + D   S        R        +  + A  +  E ++ +GG+GYI E    R
Sbjct: 305 LYTVGKNLDALGSGHVRQ--VRKDCAAVILYTAEKATWMAGETVQILGGNGYINEYPAGR 362

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            +R++    I  G+     + +   L
Sbjct: 363 LWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|322371814|ref|ZP_08046357.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320548699|gb|EFW90370.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 380

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 140/376 (37%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ +  P+   L+      GL    +   +        ++ I    +   +   
Sbjct: 26  PRASEIDETDEFPS--DLVSEMADLGLMGMPFPEEYGGAGLDYHSYAIGLEEISRGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+         +++               P+ + +      L+E   
Sbjct: 84  GTIVAAHTSLAGNMLYEFGNEEQKQEYL-------------TPLNQGTDIGAFALSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+ +  +K  D      G  W  +  ++D   + A+ +   G   +   +     
Sbjct: 131 GSDVPAMDTTAEKDGDEYVLNGGKLWISNGSVADTVTVFAKTDPDAGNKGISSFVVRPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIM 323
            +G   +  ++K+G++   T EL FS+        L     G V  +K      +  A  
Sbjct: 191 DDGFHVEGTEHKLGDKGCPTAELRFSDLRIPEDRLLGEEGDGFVHALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +  +A+ YA++R      + D   ++  +AD+   + AA  L  R A+     
Sbjct: 251 SIGLARAARDDALEYAQQREQFDRPISDFQTIQHKLADMDTKVQAAKLLMHRAADRKIRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   + AA A       K +  +++  V  E ++  GG GY  +  + R+YR++  N I 
Sbjct: 311 EDFIKHAAQA-------KLFASEISREVANEGIQIHGGYGYTTDFDVERYYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLLE 459
            G+   +   +   + 
Sbjct: 364 EGTSEVLRNTIAAQMM 379


>gi|17544998|ref|NP_518400.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427288|emb|CAD13807.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 393

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 70/393 (17%), Positives = 136/393 (34%), Gaps = 26/393 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           E+ R A  +  Q     P  E  D+ +  P  AW  +       G+        +     
Sbjct: 16  EMLRSAVRDWAQAE-LAPRAEAIDRSDQFPMDAWKQMGDL----GVLGITVAEEYGGSGM 70

Query: 130 KQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              AH I    +   +        + S    + +    TP     + PK+ S E+     
Sbjct: 71  GYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTPAQKAKYLPKLVSGEW----- 125

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                      L ++E   G+D+ ++  + +   D         W  + P  D  ++  +
Sbjct: 126 --------IGALAMSEPNAGSDVVSMKLRAECRGDRYVLNGTKMWITNGPDCDVLVVYGK 177

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  +G   +   + +    G    +  +K+G R + T EL F N        L    G 
Sbjct: 178 TEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPAENVLGEENGG 237

Query: 309 VEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +   +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD+   
Sbjct: 238 TRVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADMYTT 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A  A  + +  + D      E     R        +  + A  +  EA++ +GG+GYI
Sbjct: 298 LQACRAYLYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYI 355

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E    R +R++    I  G+     + +   L
Sbjct: 356 NEFPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|315925275|ref|ZP_07921487.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621396|gb|EFV01365.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 380

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 142/399 (35%), Gaps = 31/399 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            Y++S  A++L R  +    Q        + +DK    PA   +   +   GL+      
Sbjct: 2   AYLISDEAKDLLRDIHEFCEQNVV--EQAKEYDKTGEFPA--EMYEAAKEMGLNALEIPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +      +           +A       +S S      V +             + +  
Sbjct: 58  EYGGPGLSRVDVAALFEEMAVADAGFATTISASGLGTKPVLIAGNEDQKARVCDILVNGG 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
           +                 GLTE   G+D  A  +   K  D  Y L+G K F+++  ++D
Sbjct: 118 F--------------GAFGLTEPGAGSDPGAGKTVAVKDGDD-YILNGQKCFITNGGIAD 162

Query: 242 AFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            + + A  +    G   +   L +    GL +   ++K+G R + T ++   +       
Sbjct: 163 FYCITALTDKEAPGTHGMSIFLVEKDTPGLSHGVEEDKMGIRLSNTTDVILEDVRVPKEN 222

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L        ++S    + ++ EAI Y + R   G  ++    M+ 
Sbjct: 223 LLGGEGKGFAIAMKTLDQARAWMGVVSTGLAQRAMNEAIAYTKERKQFGRPVLKFQAMQF 282

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A+ I A+  ++       D+    S EAA       I K +    A     EA++
Sbjct: 283 KIADMAIKIEASRQMNAYALTLMDQGVPFSREAA-------IAKCFASDTAMECTTEAVQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GYI +  + +  R++    I  G+     +   N
Sbjct: 336 MFGGYGYIRDYPVEKLMRDAKIFQIFEGTNEIQRIVTAN 374


>gi|296284062|ref|ZP_06862060.1| putative acyl-CoA dehydrogenase protein [Citromicrobium
           bathyomarinum JL354]
          Length = 601

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 92/497 (18%), Positives = 178/497 (35%), Gaps = 67/497 (13%)

Query: 57  ELELLG-----EYVLSCTAQELARMANYNTPQ-LHAYGPGG-------ERWDKVEFHPAW 103
           +LE  G     E   +     +   A   T + L      G            V     +
Sbjct: 20  DLESYGNLPGFENATTDMVTSIIDEAGKFTAEVLQPLNQVGDQEGCTRHEDGSVTTPTGF 79

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    G         F        H +  A   +++       M P +T+ ++ A
Sbjct: 80  KEAFDQFREAGWGTLSMPEEFGGQGLP--HCVAFAMEEMISSANQAFGMYPGLTNGAISA 137

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L+   +    + + PK+ S E+  T             + LTE   GTD+  I ++ +  
Sbjct: 138 LIAKGSQEQKEKYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLIRTKAEPQ 184

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----G 265
           +DG Y ++G K F+S+   D       ++LA+  G       +  F+VP+ L +     G
Sbjct: 185 ADGSYSITGTKIFISAGEHDMAENIIHLVLAKTPGAPDSSKGISLFVVPKFLVNDDGSVG 244

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+    +++K+G   N+T  + + +  G+++G+ N     +  M     L   I  +
Sbjct: 245 DRNGVMCGSIEHKMGIHGNSTCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVGIQGL 304

Query: 326 SGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS 373
           S   VS   A+ YA  R                  +   P ++R + D         A +
Sbjct: 305 SQAEVSYQNAVTYALDRRQGRALTGPAEPDEKADPIFVHPDVRRMLMDAKAFNEGMRAFA 364

Query: 374 FRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A      ++  +   R        +M P+ K +       V     +  GG GYI E
Sbjct: 365 LWTALQQDLSHALQDEDERQLADDLVGLMTPVIKGYGTDKGYDVANNMQQVYGGHGYIAE 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVI 484
             + +  R++    I  G+     +D+    L   G    +  F  ++ ++ S+ G++ +
Sbjct: 425 WGMEQFVRDARIAMIYEGTNGIQAMDLAGRKLAMHGGRAVQAFFKLVDDEVASAKGEEGM 484

Query: 485 TILRDSISLCKEDKGLA 501
             L +++     ++  A
Sbjct: 485 AELAEALEKAVGEQKAA 501


>gi|188989664|ref|YP_001901674.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167731424|emb|CAP49599.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris]
          Length = 387

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 149/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEDI-DLLRESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLFGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    T    + + PK+
Sbjct: 60  VEEAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNATHEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                L ++E   G+D+ ++  + +   D         W  + P
Sbjct: 120 CTGEH-------------VGALAMSEAGSGSDVVSMKLRAEARGDRFVLNGNKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPGAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|91779136|ref|YP_554344.1| isovaleryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91691796|gb|ABE34994.1| isovaleryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 393

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 129/376 (34%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH I    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGDLGVLGMTVSEEYGGANMGYTAHMIAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTEAQKQKYLPKLVSGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K            W  + P  D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKLRAEKKGAHYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +  +K+G R + T EL F +        L    G  + +  +  LD     ++G
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGAKVL--MSGLDYERAVLAG 254

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  A     + Y   R   G  + +  +++  +AD+   + A  A  + +    D 
Sbjct: 255 GPTGIMVAVMDAVVPYIHDRKQFGQPIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                E     R        +  + A  +  EA++ +GG+GYI E  + R +R++    I
Sbjct: 315 --LGKEHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 373 GAGTSEIRRMLIGREL 388


>gi|259418857|ref|ZP_05742774.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp.
           TrichCH4B]
 gi|259345079|gb|EEW56933.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp.
           TrichCH4B]
          Length = 387

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 143/399 (35%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P  +  D+    PA   L +     GL     D  +
Sbjct: 7   TFDLGEDVNALRDMVHRWAQERVKPMAQEIDQKNEFPA--DLWKEMGELGLLGITVDEEY 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L         + P++ S E+
Sbjct: 65  GGAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNAEQKAKYLPRLISGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDRYVLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPEAGSKGITAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A +    M   + E + Y   R   G  + +  +M+  IA
Sbjct: 232 EEGKGVRVLMSGLDYERVVLAGIGTGIMASCMDEMMPYMAERKQFGQPIGNFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A A  + +A + D+     ++AA           +  ++A     +A++  G
Sbjct: 292 DMYTAMNTARAYVYEVAKACDKGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 345 GAGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|77735711|ref|NP_001029554.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|122142996|sp|Q3SZI8|IVD_BOVIN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|74268107|gb|AAI02837.1| Isovaleryl Coenzyme A dehydrogenase [Bos taurus]
 gi|296483314|gb|DAA25429.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 426

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         + +    +  +
Sbjct: 62  EHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGFLENVLVMEEISRV 121

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 122 SGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEY-------------IGALAMS 168

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  D         W  + P +D  ++ A+ +         +   
Sbjct: 169 EPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTAVPASRGITAF 228

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYL 318
           + +    G    +  +K+G R + T EL F +        L      V  +     L  L
Sbjct: 229 IVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCEVPAANILGHLGKGVYVLMSGLDLERL 288

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 289 VLAGGPLGIMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 348

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 349 ACDEGHCTTKD-------CAGVILYSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAK 401

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 402 LYEIGAGTSEVRRLVIGRA 420


>gi|83593283|ref|YP_427035.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576197|gb|ABC22748.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 137/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+    PA   L  +    G+     + S          H +    +   +   
Sbjct: 31  PRAAEIDRANAFPA--DLWPKMGALGVLGLTVEESDGGAGMGYLDHCLAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + + L  +    + + P + +  +                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQLRLNGSAEQKRRYLPGLIAGTH-------------VGALAMSETGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ ++ ++  D         W  + P +D  ++ A+ +  +    +   + +   
Sbjct: 136 GSDVVSMRTRAERRGDTFVLNGSKMWITNGPDADVLVVYAKSDPDLKSRGITAFIVEKGW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G       +K+G R + T EL F +         NV  G  E +K+L+       L  A
Sbjct: 196 KGFTTGPKLDKLGMRGSNTGELVFEDCEVPA---ENVLGGVGEGVKVLMSGLDYERLVLA 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M   L   + Y   R   G  +    +M+  +AD+   + A  A  + +A + D
Sbjct: 253 GGPLGIMEACLDAVLPYVHERQQFGRAIGSFQLMQGKLADMYTTLCACKAYVYAVAQACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ S++AA A         +  + A  +  EA++C+GG+GYI +    R  R++    
Sbjct: 313 RGKATSKDAAGA-------ILFAAEKATWMALEAIQCLGGNGYINDYPTGRLLRDAKLYE 365

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 366 IGAGTSEIRRMLIGRAL 382


>gi|323497121|ref|ZP_08102141.1| isovaleryl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326]
 gi|323317696|gb|EGA70687.1| isovaleryl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326]
          Length = 389

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 140/392 (35%), Gaps = 32/392 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           + +A  A+ +   L        + D     P  + L       GL        F      
Sbjct: 21  EHVAAFAHTHVEPLAT------QIDIDNQFP--NQLWSLMGEMGLLGVTISEEFGGADMG 72

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH +    L   +        + S   A+ +         + + PK+    Y      
Sbjct: 73  YLAHVVAMEELSRASASVGLSYGAHSNLCANQIFRNGNSEQKQKYLPKLVDGSY------ 126

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  + +   +  +      W  + P +D  I+ A+ 
Sbjct: 127 -------IGALAMSEPNAGSDVVSMQLKAELHGNYYHLNGSKMWITNGPDADVVIVYAKT 179

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +  V    +   + +    G  + +  +K+G R + T EL F +        L      V
Sbjct: 180 DPSVKSHGISAFIVEKQFEGFSHAQKLDKLGMRGSNTCELVFKDCKVPKQNLLGAENHGV 239

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + +   +  +  +++   +  M+  L   + Y   R   G  + +  +++  IAD+    
Sbjct: 240 QVLMSGLDYERVVLAGGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKIADMYTRT 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA    + +A + D  ++  ++AA A         +  ++A  +  +A++ +GG+GYI 
Sbjct: 300 NAARCYVYTVAAACDRGEATRKDAAGA-------ILYSAELATQLALDAIQLLGGNGYIN 352

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E    R  R++    I  G+     + +   L
Sbjct: 353 EFPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|254497542|ref|ZP_05110334.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254353259|gb|EET12002.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 386

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 141/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R +     +     P   + D+    P  + L R+    GL        +   
Sbjct: 10  GETYDMLRDSVRQFAR-TEIAPFAAKIDETNTFP--NHLWRKLGDMGLLGITVSEEYGGA 66

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + + L       + + PK+ S EY   
Sbjct: 67  NMGYLAHTIAMEEISRASASVGLSYGAHSNLCVNQIYLNGNATQKEKYLPKLISGEY--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++    Q   D         W  + P +D  ++ 
Sbjct: 124 ----------IGALAMSESNSGSDVVSMQLHAQASGDTFILNGTKMWITNGPDADVLVVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ + +     +   L +    G    +  +K+G R + T EL F         +LG++N
Sbjct: 174 AKTDKQAASKGITAFLIEKGMPGFKTAQKLDKLGMRGSNTCELVFEQCEVPAEQILGEIN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +           A   V  M+  +   + Y   R      + +   ++  +AD+ 
Sbjct: 234 QGVKVLMSGLDYERTILAAGPVGIMQACMDVVLPYVHERKQFEQAIGEFQFIQGKLADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D++A+ A  + +A + D+     ++AA           +  + A  +  +A++ +GG+G
Sbjct: 294 TDLSASRAYLYTIAKACDQGLVSRKDAAG-------VILYTAEKATQMALQAIQILGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E    R  R++    I  G+     + +   L K T 
Sbjct: 347 YINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFKETA 386


>gi|198421914|ref|XP_002127780.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase [Ciona
           intestinalis]
          Length = 429

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 124/369 (33%), Gaps = 24/369 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLM 143
               P  +  D+    P   +  ++    GL       S          H I    +   
Sbjct: 67  EELTPLADEIDRTNNFPQMRSFWKKLGDMGLMGITVPESDGGTGLGIFEHCIVMEEMSRS 126

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +A          + P + S                   L ++
Sbjct: 127 SGAIALSYGAHSNLCVNQIARHGNDEQKAKYLPPLISG-------------DKVGALAMS 173

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K  D         W  + P +D  ++ A+ +       +   L 
Sbjct: 174 EPGSGSDVVSMKLKAEKKGDYYVLNGSKFWITNGPDADTLVVYAKTDIAAEAQGITAFLV 233

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           +    G    +  +K G R + T EL F N        LG  N     +     L  L  
Sbjct: 234 EKGMEGFSTAQKLDKFGMRGSNTCELVFENCKVPAKNTLGAYNRGVYVLMSGLDLERLVL 293

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   +  M+  L  A  Y  +R   G  + +  +M+  +AD+   ++A  A  + +A + 
Sbjct: 294 SAGPIGLMQAVLDTAFPYMHQRKQFGQNIGEFQLMQGKMADMYTKLSACRAYMYGIARAC 353

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    + +             +  + A  V  + ++C+GG+GYI +    R  R++   
Sbjct: 354 DKGHFNNRD-------CAGVILYAAEAATQVALDGIQCLGGNGYINDYPTGRFLRDAKLY 406

Query: 441 SILLGSGNA 449
            I  G+   
Sbjct: 407 EIGAGTSEI 415


>gi|239826721|ref|YP_002949345.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239807014|gb|ACS24079.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 381

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 143/377 (37%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +   +   +G  C   D  +       A+ +             
Sbjct: 27  PYYSEWEKKGIIP--RSFWTKMGENGFLCPWVDEEYGGFNADFAYSVVINEELEKVGASM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    + W PK  S E             +   + +TE   G
Sbjct: 85  VGIGLHNDIVVPYLASYGTEEQKRKWLPKCVSGE-------------IITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRV--GCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    +++A +           +  L+ + 
Sbjct: 132 SDLAGISTTAIKDGD-YYIVNGQKTFITNGIHADLVVVACKTNPNAQPPHKGISLLVVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G  +  T EL F++       LLG+       + +      L  AI
Sbjct: 191 DTPGFTRGRKLDKVGLHAQDTAELFFNDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V       Y ++R   G  + +   ++  +A++A +IA       R+     +
Sbjct: 251 AAQTAAEVMFELTKQYVKQRSAFGKRISEFQTVQFRLAEMATEIAIGRTFVDRVIEEHMQ 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+             + K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I
Sbjct: 311 GKN-------VVTHVSMAKWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 364 YAGTNEMMKTIIARTLD 380


>gi|254295049|ref|YP_003061072.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043580|gb|ACT60375.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 377

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 134/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W++  F      +  +    G         F      +   +          +  
Sbjct: 25  PNAAKWEREHFLD--RDVFVQLGELGFGGIYTQEEFGGSALSRLDAVLIFEQLSKGCISH 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    + +M+       +   + P++              K  +     LTE   G
Sbjct: 83  AAFLSIHNMATAMIDKFGDDALRAKYLPQLT-------------KCDLLASYCLTEPNSG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++     +  Y L+G K F+S    SD ++++A+     G   +   +     
Sbjct: 130 SDAASLQTKAVLKGED-YVLNGSKIFISGGNFSDIYVVMARTSDE-GARGISTFVVPKDA 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G R+  T  + F +        + V   G    M  L    L+ A  S
Sbjct: 188 PGLSFGKNEEKMGWRAQPTCMVNFDDCRIPASNLVGVIGEGFKYAMAGLDGGRLNIASAS 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L  AI Y + R   G  + D    +  +AD+ +D+ A  A+ +  A   D   
Sbjct: 248 LGGAQEALDRAIAYTKDRKQFGKSISDFQATQFKLADMDIDLRACRAMLYEAARKLDANA 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A       K +       +  EA++  GG GY+ E  I R  R+   + IL 
Sbjct: 308 PD------ATPACAAAKRFVTDKGFDIANEALQLHGGYGYLSEYEIERIVRDLRVHKILE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   L
Sbjct: 362 GTNEVMRMIVSRSL 375


>gi|78046920|ref|YP_363095.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035350|emb|CAJ22995.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 407

 Score =  272 bits (695), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 132/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 49  PHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 106

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++A   T  V   W   + S              +      LTE   G
Sbjct: 107 SAFISIHNMATWLIASYGTDAVRAQWGQAMTSG-------------AKLGSYCLTEPGSG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 154 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVPADAP 212

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S+
Sbjct: 213 GISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLGKEGEGFKMAMKALDGGRINIAACSL 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 273 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 332

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 333 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 386

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 387 TNEVMRMIVARHLLNGEEELR 407


>gi|152985894|ref|YP_001348634.1| citronelloyl-CoA dehydrogenase, GnyD [Pseudomonas aeruginosa PA7]
 gi|150961052|gb|ABR83077.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 387

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 138/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    + R+    GL     D  +        AH +    +   +   
Sbjct: 31  PRAAQIDQDNQFPM--DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +           + P + S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKRNGNAEQKARYLPALVSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  ++ D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDMDKGAHGITAFIVERDW 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L    G V+ +   +  +  ++S   
Sbjct: 196 KGFSRGPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 256 VGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTSLNASRAYLYAVAAACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI E S  R  R++    I  
Sbjct: 316 TTRKDAAG-------VILYSAERATQMALDAIQILGGNGYINEFSTGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|153007382|ref|YP_001368597.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559270|gb|ABS12768.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 387

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 137/402 (34%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 10  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNAFPMH--LWRELGELGVLGITAPEEYG 65

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 66  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQIKRNGSPEQRAKYLPKLISGEH- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 125 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 172

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 173 VYAKTDPSAGPRGISAFIVEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGE 232

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 233 VGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A ++ +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 293 MYVTFNASRAYTYAVAAACDRGETSRKDAAG-------CILYTAENATQMALQAIQSLGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 346 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 387


>gi|71280784|ref|YP_268345.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71146524|gb|AAZ26997.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 389

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 144/382 (37%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E+ D     PA   L ++    GL     +  +         H +    +   +   
Sbjct: 33  PRAEQIDIDNEFPA--DLWKKFGDMGLLGMTVEEEYGGSGLGYLEHIVAMQEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +      + PK+ + E+                L ++E   
Sbjct: 91  GLSYGAMSNLCLNQLRKNGSHEQKLKYLPKLCTGEH-------------VGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D F++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLRADKKGDKYILNGNKMWITNGPDADVFVIYAKTDTSAGSKGITAFIVERDY 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +         N+     + +++L+  LD   + +S
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFQDCEVPA---ENILGAEGKGVRVLMSGLDYERVVLS 254

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + + +A       Y   R   G  + +  +++  +AD+   + AA + ++ +A + D
Sbjct: 255 GGSLGIMDACMDLVVPYIHDRKQFGQSIGEFQLVQGKVADMYTQMNAAKSYAYMVAQACD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  +++A           +  ++A  +  + ++ +GG+GYI E    R  R++    
Sbjct: 315 RGETTRKDSA-------AVILYAAELATKMALDTIQLLGGNGYINEFPAGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   +N
Sbjct: 368 IGAGTSEIRRMLIGRELFNESN 389


>gi|325121788|gb|ADY81311.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 383

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 136/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +E +    +     A  L   +      + + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P++   E             V     LTE   G+D A++ +   K  D  Y L+G
Sbjct: 106 KSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKTTAVKDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+    + G   +   + D    G+   +   K+G +   T +
Sbjct: 152 TKRFITNAPHAGVFTVMARTNPDIKGTSGISAFIVDSQTPGIFLGKRDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +SV      L ++++YA  R  
Sbjct: 212 VIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   + +  +
Sbjct: 325 TEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIARNMIRAAS 383


>gi|212534366|ref|XP_002147339.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
 gi|210069738|gb|EEA23828.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei
           ATCC 18224]
          Length = 349

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 129/359 (35%), Gaps = 17/359 (4%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           + ++    G      D  +  +    QAH      +   +        + S    + ++L
Sbjct: 1   MWKKFGEAGFLGVTADEEYGGLAMGYQAHCTVLEEISRASGSIGLSYAAHSQLCVNQLSL 60

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    + P + S                   L ++E   G+D+ ++ +  + +  G
Sbjct: 61  NANAEQKAKYLPGLISG-------------DKVGALAMSEHSAGSDVVSMKTTAKAVDGG 107

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  + P +D  ++ A+ E       +   + + +  G    R  +K+G R +
Sbjct: 108 WLLNGTKMWITNGPDADYIVVYAKTEPEKASKGISAFIVEKTFKGFSCARKLDKLGMRGS 167

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F + F     LLG+LN     + +   L  L  +   +  M+ +L   + Y   
Sbjct: 168 NTGELVFEDVFIPKENLLGELNRGVKVLMEGLDLERLVLSAGPLGIMQSALDLVLPYTHT 227

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      +    +++  +AD+   +AA+ A ++  A S DE+ +                
Sbjct: 228 RKQFNTPIAHNQLIQGKLADMYTKLAASRAYTYATAKSIDESSAAPSGTLIRTQDCAGAI 287

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  + A     +A++ +GG+GYI E    R  R++    I  G+     + +     K
Sbjct: 288 LYAAERATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 346


>gi|15595705|ref|NP_249199.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099494|ref|ZP_01363412.1| hypothetical protein PaerPA_01000506 [Pseudomonas aeruginosa PACS2]
 gi|218889249|ref|YP_002438113.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|9946373|gb|AAG03897.1|AE004488_1 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218769472|emb|CAW25232.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 592

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 184/498 (36%), Gaps = 60/498 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWHALLR 108
            +L  L E V + TA  +   A   T     P        G +W+   V     +    R
Sbjct: 26  AQLPALAEVVDAETAAAILEEAGKVTAGTIAPLNRPGDEEGCQWNAGAVSTPAGFPEAYR 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MT 166
                G      D ++  +   +   I A    L+        + P +T+ + +AL    
Sbjct: 86  TYAEGGWVGVGGDPAYGGMGMPK--VISAQVEELVNSANLSFGLYPMLTAGACLALNAHA 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y
Sbjct: 144 SDELKDKYLPNMYAGIW-------------AGSMCLTEPHAGTDLGIIRTRAEPQADGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            +SG K F++    D       ++LA++         +  FLVP++L +     G  N L
Sbjct: 191 KISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVNADGSLGEKNSL 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  + F    G+L+G++N     +  M     L   I  ++    
Sbjct: 251 GCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKGLAAMFTMMNYERLGVGIQGLATGER 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   AI YAR R  S               +I  P ++R +  +        A S  +A 
Sbjct: 311 SYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAM 370

Query: 379 SFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D AK      +R        ++ P+ K +   M         +  GG G+I E    +
Sbjct: 371 QLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGHGFIREWGQEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
             R+     I  G+     LD++   ++  G          ++  + S+ + +    +  
Sbjct: 431 LVRDCRITQIYEGTNGIQALDLVGRKVIGSGGAFSRHFTDEIKAFVASADEALGEFSKPL 490

Query: 491 ISLCKEDKGLARFLTEKI 508
            +  +  + L  +L ++ 
Sbjct: 491 AAAVENLEELTAWLLDRA 508


>gi|93005175|ref|YP_579612.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92392853|gb|ABE74128.1| isovaleryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 395

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 61/380 (16%), Positives = 136/380 (35%), Gaps = 20/380 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  +  P    L ++    GLH       +        AH +    +   +   
Sbjct: 31  PRAAEIDSSDEFPM--DLWQKMGDIGLHGITVPEEYGGSNMGYVAHMVAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCINQIKRNGSEAQKQKYLPKLISGEF-------------IGALAMSETGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++            W  + P +D  ++ A+    +G   +   + +   
Sbjct: 136 GSDVVSMKLKAEEKDGSYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGMTAFIVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T E+ F N        L      V+ +   +  + A+++   
Sbjct: 196 EGFGTAQKLDKLGMRGSHTGEMTFKNVEVPSENILGGLNEGVKVLMSGLDYERAVLAAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  +AD+   + A  +  + +  + D   
Sbjct: 256 IGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSFLYTVGKNLDMLD 315

Query: 385 SRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +R    +   R        WC + A  +  E ++  GG+GY  E  + R++R++    I 
Sbjct: 316 ARGAGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYPLGRYWRDAKLYEIG 375

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     + V   L   T 
Sbjct: 376 AGTSEIRRMLVGRELFNETK 395


>gi|300711655|ref|YP_003737469.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125338|gb|ADJ15677.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 380

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 140/371 (37%), Gaps = 27/371 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ +  P    L+      GL    +   +        ++ I  A +   +   
Sbjct: 26  PRASEIDENDEFP--RDLIEEMGELGLMGIPFPEEYGGAGLDYHSYAIGLAEISRGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+    +    + +               P+ +        L+E   
Sbjct: 84  GTVVAAHTSLAGNMLYEFGSEDQKETYL-------------TPLAEGRDVGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+ +  ++  +      G  W  +  ++D  ++ A+ +   G   +   +     
Sbjct: 131 GSDVPAMETTAERDGEEYVIDGGKLWISNGSVADTVVLFAKTDPEAGNRGISSFVVRPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIM 323
             G   +  ++K+G++   T EL FS         L     G V+ +K      +  A  
Sbjct: 191 DEGFLVEGTEHKLGDKGCPTAELRFSEMRIPESRRLGEEGEGFVQALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +L +A  YA  R   G  + +   +K  +AD+   ++AA  L  + A+     
Sbjct: 251 GVGLAQAALDDAREYANEREQFGQPIGEFQTIKHKLADMDTKLSAARLLMHQAADLKIRD 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EAA A       K +  +++  V  EA++  GG GY ++  + R+YR++  N I 
Sbjct: 311 EEFIKEAAQA-------KLYASEISREVANEAIQIHGGYGYTKDFDVERYYRDAKLNEIY 363

Query: 444 LGSGNAMVLDV 454
            G+   +   +
Sbjct: 364 EGTSEILRNTI 374


>gi|76802108|ref|YP_327116.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160]
 gi|76557973|emb|CAI49558.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160]
          Length = 603

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 133/571 (23%), Positives = 228/571 (39%), Gaps = 71/571 (12%)

Query: 33  GMNAYSSDSLLV-ALIANFPS----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G N +  D  L       +P        + L   G+ VL     + A   +    +L ++
Sbjct: 16  GCNYWELDPTLQFEAERIYPDDDFEWAEEVLSEFGD-VLGHRMADTADRIDKEGHELCSF 74

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              GER ++VE+HP      R +  +         +                  L++ ++
Sbjct: 75  DKFGERRNEVEYHPLIEEQERITYEEFGVTHDAFHAPPGRDEPVGLSHTLMMQTLLSYVD 134

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE---YDPTNKAPMQKTSVAIGLGLTE 204
           AG     S+T+ + + L            K    E   Y     A    T +   + LTE
Sbjct: 135 AGFCCPVSMTTGAAIVLD-----------KFDDGELSSYFEGLTARDLDTHIEGAMFLTE 183

Query: 205 KRGGTDIAAITSQGQK------------ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG- 251
           ++GG+D+ A  ++ +               D IY L G KWF S+  ++  + LA+  G 
Sbjct: 184 EQGGSDVGANETRAEPVEADDSVAAADIDRDRIYRLHGEKWFCSNIDAEGALALARTPGA 243

Query: 252 -----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
                 +  FLVPR   DG  N   ++RLK+K+G  S  T E++F     +L+G+     
Sbjct: 244 PEGVDGLSLFLVPRTKPDGEVNEAHFRRLKDKLGTISVPTGEIQFEGAEAYLVGEEGRGF 303

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +M     L +A  ++  M   L EA   A +R   G  + + P+++R + D+++D 
Sbjct: 304 KYMSEMMNFERLTNATGALGVMGRGLLEAKVRAAQREAFGDAIDEYPLLRRDLVDMSVDY 363

Query: 367 AAATALSFRLANSFDEAKSRSEEAA---YARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            AA A SF  A + DE + + +++      R+  P+ KY   +M+  + + AME +GG+G
Sbjct: 364 EAAAAFSFEAARTLDERERQGDDSDAYQLMRLFIPVAKYKTARMSVDMSSYAMEILGGNG 423

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           Y+ E +  R  R++    I  G  N + LDVL    +  +  E L   L+  L +     
Sbjct: 424 YVREHTTERLLRDAQVLPIWEGPSNILALDVLRAFNRE-DAHEALVPYLQAKLDAVEHPA 482

Query: 484 ITILR------------DSISLCKED----KGLARFLTEKIALASSAAALYRAGMND--- 524
           +  L                SL  ED    +  A+ L + +    S A L          
Sbjct: 483 LEPLAGTVEERFVELQNALASLATEDGDYAQYHAKRLADLVFDVVSGALLLEEAQEQIDA 542

Query: 525 --------IADVFLENRFLDNCHSTHCMLHG 547
                   +A  F+E RF D+    + +  G
Sbjct: 543 DGNGRKALVATRFIETRFEDD--EAYGVTSG 571


>gi|327482498|gb|AEA85808.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 619

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 89/489 (18%), Positives = 182/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 55  DMVNAILDEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAH 114

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + +    TP   + +  K+ S
Sbjct: 115 DVEHGGQGLPESLGMAMSEMIGEANWSWGMYPGLSHGAMNTLHAHGTPEQQQTYLTKLVS 174

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 175 GQWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 221

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L     E G  NG+    +++K+G   N
Sbjct: 222 DMAENIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGEAGERNGVSCGSIEHKMGIHGN 281

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V+    I YAR R  
Sbjct: 282 ATCVMNFDGATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGIKYARERLQ 341

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + R
Sbjct: 342 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDVMQRSQDEEQR 401

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 402 KAADAMLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISCLYEGT 461

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   ++ G   +    + ++   ++ G    
Sbjct: 462 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQANEGNDTVKEFVEPLAKLNKEWGE--- 518

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 519 LTMKVGMAA 527


>gi|284167580|ref|YP_003405858.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017235|gb|ADB63185.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 374

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 137/374 (36%), Gaps = 26/374 (6%)

Query: 91  GERWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G   D+ +    +   +        L        +  +                  L   
Sbjct: 23  GADVDEADEKQEFPEDVWDGLAELDLTGLTVPEEYGGLDVDTLTYSIVNEELAYGHLAVA 82

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +S    + S +    +    ++W P++ +                     L+E   G+
Sbjct: 83  TALSVHCLATSCIRQFGSEEHREEWLPEMVTG-------------RPVGAFALSEPEAGS 129

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + A +T++ +   D        +W  +   ++  I+ A+ + R     V + L     +G
Sbjct: 130 NPAEMTTEARLEGDEYVINGTKQWITNGERAEVVILFAKTD-RGDPDSVTQFLVPKDVDG 188

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDSAIMSVS 326
           L   + ++K+G R++ T  L F          L  V  G      IL    +  A  +V 
Sbjct: 189 LEVGKKEDKLGLRASDTTTLVFDGVRIPAENRLTEVGEGLKAAFSILTGGRVGIASQAVG 248

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L ++I YA  R   G  +ID   +   +AD+  D+ AA  L+   A   +E    
Sbjct: 249 VAQAALDDSIAYANDREQFGKPIIDHQAIGHKLADMQTDVQAARLLTRDAAR-KNEGDVD 307

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++ AA A       KY+  + A  V  EA++  GG GY ++  + R+YR++   +I  G+
Sbjct: 308 AKSAAMA-------KYFASEAAVDVANEAVQIHGGYGYTKDFDVERYYRDAKITTIYEGT 360

Query: 447 GNAMVLDVLNLLEK 460
                  +   L++
Sbjct: 361 SEIQKKIIARHLKR 374


>gi|307727405|ref|YP_003910618.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587930|gb|ADN61327.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 393

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 131/376 (34%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAAEIDRTDQFPM--DLWRKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTQAQKQKYLPKLVSGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +  D         W  + P  D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKLRADRKGDRYVLNGTKMWITNGPDCDTLVVYAKTDPEANSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +  +K+G R + T EL F +        L    G V+ +  +  LD     ++G
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVL--MSGLDYERAVLAG 254

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  A     + Y   R   G  + +  +++  +AD+   + A  A  + +    D 
Sbjct: 255 GPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +E     R        +  + A  +  EA++ +GG+GYI E  + R +R++    I
Sbjct: 315 --LGTEHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 373 GAGTSEIRRMLIGREL 388


>gi|239932480|ref|ZP_04689433.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440843|ref|ZP_06580233.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343738|gb|EFE70694.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 125/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  +    +     ++      MA+L  G  +S    ++  +A   T     +  P +
Sbjct: 63  PYDAEYGGGDQPYEVYLQVLEELAMARLTVGLGVSVHTLASYALAAYGTKEQQAEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPASGSDAASLRTRAVRDGDHWVITGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           ++D + ++A+  G  G   +   L  G   GL     + K+G + + T ++         
Sbjct: 170 IADFYTVMART-GEEGPRGITAFLVPGDAEGLSAAAPEKKMGMKGSPTAQVHLDGVRVPD 228

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              LG+                L  A  +V   + +L EA+ YA  R   G  + D   +
Sbjct: 229 SRRLGEEGQGFAIALSALDGGRLGIAACAVGLAQAALDEALRYAAERRQFGRPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D  +  +++AA A       K  C   A  V  +A
Sbjct: 289 RFMLADMATQIEAGRALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 342 VQILGGYGYTADFPAERYLREAKVLQIVEGTNQIQRMVIARHL 384


>gi|254516883|ref|ZP_05128941.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219674388|gb|EED30756.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 389

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 136/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    PA   L  +    GL     D  F        AH I    +   +   
Sbjct: 33  PRAAQIDRDNDFPA--DLWPKLGAMGLLGITVDEEFGGSGMGYLAHSIVMEEISRASGSV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ + E+                L ++E   
Sbjct: 91  GLSYGAMSNLCLNQIQRHGNDAQRSHYLPKLCTGEH-------------VGALAMSEANA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  Q ++  D         W  + P +D +++ A+ + + G   +   + +   
Sbjct: 138 GSDVVSMKLQARREGDHYVLNGTKMWITNGPDADVYVIYAKTDAQAGSRGITAFIVERDY 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L      VE +   +  +  ++S   
Sbjct: 198 PGFSRSPKLDKLGMRGSNTCELVFEDCKVPAENILRAEGKGVEILMSGLDYERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  + E + Y   R   G  + +  +M+  +AD+  D+ A  +  + +A + D  +
Sbjct: 258 VGIMQACIDEVLPYLHTRQQFGQAIGEFQLMQGKLADMYADLNACRSYLYTVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++             +  + A  +  +A++ +GG GY  E +  R  R++    I  
Sbjct: 318 ETRQD-------CAAVILYTAEKATQLALQAIQALGGYGYTNEANAGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K + 
Sbjct: 371 GTSEIRRMLIGRELFKASA 389


>gi|71282496|ref|YP_269431.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71148236|gb|AAZ28709.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 385

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 134/386 (34%), Gaps = 30/386 (7%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P        G+R         + + L++    G         +            A    
Sbjct: 26  PVAEKLDQYGDR-------ELFLSNLKKLAELGFMGLNVGAQYGGAEAGTVVFSLAMTEI 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A       MS +     ++  + +    + + PK+ S EY             A G  
Sbjct: 79  SRACASTAVTMSVTNMVGEVIESVASEAQKEKYLPKLCSGEY------------AAGGFC 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPR 260
           LTE   G+D + + ++     D        ++  S   +  F++ A  +        +  
Sbjct: 127 LTESGAGSDPSGMKTKAILEGDEWVINGAKQYITSGEYAGVFVLWAVTDPSAPRGKGISC 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            L +    GL     + K+G  ++AT E+ F N       L+G LN              
Sbjct: 187 FLVEADAPGLIISPAEKKMGQHASATNEVVFDNCRLPKDALMGTLNQGFKVAVSELAGGR 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +    +S+     ++  A  Y   R   G  +     ++  +AD   D+ AA  L    A
Sbjct: 247 IGIGSLSLGIGLAAIDFARDYVNERQQFGQKIAKFQGIQWMLADAYTDLEAARLLLMNAA 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D+ +   +EA+ A       K +  + A  V   A++ +GG+GYI++  + R+ R+ 
Sbjct: 307 DKKDKGQPFGKEASMA-------KLFASEKANQVCYTALQLMGGAGYIKDYPLERYARDV 359

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
              SI  G+     + +   L +  N
Sbjct: 360 RVASIYEGTSEIQRVIIARDLLQEIN 385


>gi|21355753|ref|NP_648239.1| CG6638 [Drosophila melanogaster]
 gi|7295072|gb|AAF50398.1| CG6638 [Drosophila melanogaster]
 gi|19528527|gb|AAL90378.1| RE62833p [Drosophila melanogaster]
 gi|220948676|gb|ACL86881.1| CG6638-PA [synthetic construct]
 gi|220958078|gb|ACL91582.1| CG6638-PA [synthetic construct]
          Length = 420

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 151/431 (35%), Gaps = 37/431 (8%)

Query: 38  SSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
             D  L     +A++P        + G        +E+A   N+   +L    P  +  D
Sbjct: 16  RGDRPLSWTRTLAHYPVND----AMFGLDEDRQKLREVAF--NFFQKELA---PLAKEID 66

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           K++         ++    G      +  F         H I        A   A    + 
Sbjct: 67  KLDNFKDMRPFWKKLGALGFLGITAEPDFGGTGGSYLDHCIIMEEFSRAAGGVALSYGAH 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    TP   + + PK+ S E+               GL ++E   G+D+ ++
Sbjct: 127 SNLCINQLTKNGTPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSM 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCY 272
             + ++  D         W  +   +D  I+ A+  G        +   + + +  G   
Sbjct: 174 KLRAERKGDYYVLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWEGFSV 233

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +  +K+G R ++T EL F +       +LG  N     +        L  A   V  M+
Sbjct: 234 AQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQ 293

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D      ++
Sbjct: 294 AACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKD 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                        +  + A  V  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 354 -------CAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEI 406

Query: 450 MVLDVLNLLEK 460
               +   L +
Sbjct: 407 RRWLIGRQLNQ 417


>gi|145225587|ref|YP_001136265.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145218073|gb|ABP47477.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 387

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 142/393 (36%), Gaps = 36/393 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+  A  A           P    WD+    P    +LR +   G+             
Sbjct: 13  IAETAAAFAE------KRLAPHALEWDETHHFPV--DVLREAAELGMAAIYCGEDAGGSG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++   +R       A       +S     A MV    T    K W PK+ S        
Sbjct: 65  LRRIDAVRIFEKLSTADPTVAAFLSIHNMCAWMVDSFGTEEQRKLWVPKLASM------- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
                        LTE   G+D +A+ ++  +  D  Y L G K F+S    SD +I++A
Sbjct: 118 ------DAIASYCLTEPGAGSDASALRTKAVRSGDE-YVLDGVKQFISGAGTSDVYIVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  G  G   +   +      GL +   + K+G  +  T ++            L    G
Sbjct: 171 RT-GSDGPKGISAFVVPKDTPGLSFGTDEVKMGWNAQPTRQVILEGARVPADALLGGPDG 229

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 I +       ++ A  S+ G + +  + + Y   R   GG L+D+P ++  +AD
Sbjct: 230 EGTGFGIAMKGLNGGRINIAACSLGGAQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLAD 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  +  + AL +R A + D       E      +  + K +       V  +A++  GG
Sbjct: 290 MATGLETSRALLWRAATALDNDHPDRVE------LCAMAKRYVTDACFEVADQALQLHGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GY+ E  + +  R+   + IL G+   M + +
Sbjct: 344 YGYLREYGLEKIVRDLRVHRILEGTNEIMRVVI 376


>gi|326319047|ref|YP_004236719.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375883|gb|ADX48152.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 395

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 142/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               +  R A     Q     P     D+ +  P    L R+    G+       ++   
Sbjct: 14  GEDIDALRDAVREFAQAE-IAPRAGEIDRDDQFPM--DLWRKMGELGVLGITVSEAYGGA 70

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    +    + + PK+ S E+   
Sbjct: 71  QMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGSEEQKRKYLPKLVSGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLRAEDKGGYYLLNGSKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N    +   L    
Sbjct: 178 AKTEPELGARGVTAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPVSQVLGQVN 237

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 238 GGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMY 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  + ++ +A + D     +E     R        WC + A  +  E ++  GG+G
Sbjct: 298 TVLQAGRSFAYTVAKNLDM--LGTEHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNG 355

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 356 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|195375919|ref|XP_002046745.1| GJ12313 [Drosophila virilis]
 gi|194153903|gb|EDW69087.1| GJ12313 [Drosophila virilis]
          Length = 424

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 157/436 (36%), Gaps = 36/436 (8%)

Query: 38  SSDSLLVALIANFPSV--VHKELELL----GEYVLSCTAQELARMA-NYNTPQLHAYGPG 90
           + ++LL       P+     + L         + L    Q+L   A N+   +L  +   
Sbjct: 9   TCNTLLHYGGGRLPAAAPWSRTLTHYPINDALFGLDEERQKLRETAFNFFQKELAPH--- 65

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAG 149
            +  DK++      +  ++    G      +  F         H I    +   A   A 
Sbjct: 66  AKEIDKLDSFKDLRSFWKKMGELGFLGITAEPEFGGTGGSYLDHCIIMEEISRAAGGVAL 125

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + +    TP   + + PK+ S E+               GL ++E   G+
Sbjct: 126 SYGAHSNLCINQLTKNGTPEQKQKYLPKLCSGEH-------------IGGLAMSEPGAGS 172

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSP 267
           D+ ++  + ++  D         W  +   ++  I+ A+    G      +   + +   
Sbjct: 173 DVVSMKLRAERKGDYYVLNGTKFWITNGADAETLIVYAKTGASGVPDRHAITAFIVETGW 232

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R ++T EL F +       +LG  N     +        L  A   
Sbjct: 233 EGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNVLGQENKGVYVLMSGLEFERLVLAAGP 292

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+ +   A  YA +R   G ++ +  +++  +AD+   ++A  +  + +A S D   
Sbjct: 293 VGLMQAACDVAFDYAHQRKQMGKLIGEFQLIQGKMADMYTTLSACRSYLYAVARSCDAGV 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S++             +C + A  V  +A++ +GG+GYI E    R  R++    I  
Sbjct: 353 RSSKD-------CAGVILYCAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGA 405

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       +   L +
Sbjct: 406 GTSEIRRWLIGRELNQ 421


>gi|12836655|dbj|BAB23751.1| unnamed protein product [Mus musculus]
          Length = 424

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+           ++    G+        +         H +    +   +   
Sbjct: 64  PKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 124 GLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEF-------------IGALAMSEPNA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +         +   + + 
Sbjct: 171 GSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAVPASRGITAFIVEK 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +            +     +     L  L  A 
Sbjct: 231 GMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAG 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   + A+    + +A + DE
Sbjct: 291 GPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMASRQYVYNVAKACDE 350

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +  + A  V  + ++C+GG+GYI +  + R  R++    I
Sbjct: 351 GHIIPKD-------CAGVILYAAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI 403

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 404 GAGTSEVRRLVIGRA 418


>gi|12857011|dbj|BAB30859.1| unnamed protein product [Mus musculus]
          Length = 424

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+           ++    G+        +         H +    +   +   
Sbjct: 64  PKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 124 GLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEF-------------IGALAMSEPNA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +         +   + + 
Sbjct: 171 GSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAVPASRGITAFIVEK 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +            +     +     L  L  A 
Sbjct: 231 GMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAG 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   + A+    + +A + DE
Sbjct: 291 GPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMASRQYVYNVAKACDE 350

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +  + A  V  + ++C+GG+GYI +  + R  R++    I
Sbjct: 351 GHIIPKD-------CAGVILYAAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI 403

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 404 GAGTSEVRRLVIGRA 418


>gi|253700014|ref|YP_003021203.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251774864|gb|ACT17445.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 385

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 135/376 (35%), Gaps = 23/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+ +  PA+ A L++    G         +            A      A    
Sbjct: 26  PLAARLDREDDRPAFLANLKKLAELGFMGLNVSAEYGGSEAGVVAFSVAMTEIARACAST 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S +     ++  + +    K + P+I S EY             A    LTE   G
Sbjct: 86  AVTVSVNNMVCEVIQAIGSAEQKKKYIPRICSGEYP------------AGAFALTETGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +D A +T+      D         +  S+P +  F++ A  +        +   L +   
Sbjct: 134 SDPAGMTTSALAEGDEWVLNGSKIFITSAPYAGVFVVWAVTDKDAAKGKGISCFLVEQGA 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   + + K G  ++AT E+ F N       L+G LN              +    + 
Sbjct: 194 PGLVIGKQEEKTGQHASATCEVIFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGIGSLG 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     ++  A  YA  R   G  +     ++  +A+   ++ AA  L  + A   D  K
Sbjct: 254 LGVGLAAMDFATRYASERVQFGQKITGFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGK 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S ++EA+ A++       +  + A      A++ +GG GY  +  + R+ R++   +I  
Sbjct: 314 SFAKEASMAKM-------YATEAANRACYSAVQMLGGYGYTRDFPVERYARDARITAIYE 366

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 367 GTNEIQRVIIAREILR 382


>gi|302820126|ref|XP_002991731.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii]
 gi|300140412|gb|EFJ07135.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii]
          Length = 416

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 144/413 (34%), Gaps = 26/413 (6%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           ++    LE   +  L  TA +  +   +   +     P     D     P    L +   
Sbjct: 24  ALATAALEQSYDAALDETAAQFKKSVQHFAAE--HIAPHAATIDATNSFPKDRNLWKLMG 81

Query: 112 HDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              LH       +  +      H +    +   +        + S    + +    T   
Sbjct: 82  DFNLHGITAPEKYGGLGLGYLYHCLAMEEISRASGSVGLSYGAHSNLCINQLVRNGTEAQ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + +  ++ S E+                L ++E   G+D+ ++  + ++   G      
Sbjct: 142 KEKYLSQLISGEH-------------VGALVMSEPNSGSDVVSMKCKAERRDKGYVLNGN 188

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  + P+++  I+ A+ +   G   +   + +    G    +  +K+G R + T EL 
Sbjct: 189 KMWCTNGPVANTLIVYAKTDNSAGAHGITAFIIEKGMEGFTTAQKLDKLGMRGSDTCELV 248

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F + F      L      V  M     L  L  A   +  M+  +   + Y R+R   G 
Sbjct: 249 FQDCFVPPENILGQEGKGVYVMMSGLDLERLVLASGPLGLMQACMDVVLPYVRQREQFGK 308

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +  +++  +AD+   + A+ AL   +A S D      ++             +  + 
Sbjct: 309 PIGEFQLIQGKLADMYTKMQASRALVHSVARSCDAGHIDRKD-------CAAAILFSSEN 361

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  +  +A++C+GG+GY+ E    R  R++    I  G+     + +   L K
Sbjct: 362 ATQMALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMLIGRQLYK 414


>gi|262373491|ref|ZP_06066769.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311244|gb|EEY92330.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 390

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 127/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEEYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ S E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEDQKQKWLPKMASGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I              D       E +     A 
Sbjct: 278 TKDRKAFGKPIGTFQNTRFKLAELRTEIDFCRTY-------LDRCMELQLEESLGVDAAA 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 331 AAKYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIMKELISRTL 390


>gi|90022774|ref|YP_528601.1| acyl-CoA dehydrogenase family protein [Saccharophagus degradans
           2-40]
 gi|89952374|gb|ABD82389.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40]
          Length = 589

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 175/489 (35%), Gaps = 55/489 (11%)

Query: 58  LELLGE---YVLSCTAQELARMANYNTPQLHA-YGPGGERWDK--VEFHPAWHALLRRSI 111
           LE +G+          +E A++       L+      G +W +  V     +    +   
Sbjct: 28  LEGMGDMDIDTADAILEEAAKICEEVLAPLNREADEQGSQWSEGNVTSPEGFKDAYQTFC 87

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G +    +  ++ +   +        +   + +  G     +  ++  +    +  + 
Sbjct: 88  EGGWNGLGGNPEYDGMGMPKTLVAAVEEMLQGSCIAFGLAPMLTAGASFAINAHASDELK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + PK++S E+             A  + LTE   GTD+  I ++ Q  +DG Y ++G 
Sbjct: 148 ALYLPKMYSGEW-------------AGAMDLTEPHAGTDLGLIRTKAQPQADGSYAITGT 194

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    D       ++LA++         +  FLVP+++ +     G+ NG+    +
Sbjct: 195 KIFITWGEHDMADNIVHLVLAKLPDAPAGSRGISLFLVPKVIPNADGSLGARNGVSCGSI 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + K+G +++AT  + F    G+L+G+ N     +  M     L   +  +S    S   A
Sbjct: 255 EKKMGIKASATCVMNFDGAQGWLVGEPNKGLMAMFTMMNYERLMVGVQGISVAEASYQNA 314

Query: 336 IHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
             YA+ R  S               L+  P ++R +  +        A    +A   D A
Sbjct: 315 AEYAKERIQSRSPSGPQMPDKEADSLLVHPDVRRMLMTMRAYNEGGRAFYIYVARWLDTA 374

Query: 384 K------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           K       R        ++ P+ K +   +A        +  GG GYI E    +H R+ 
Sbjct: 375 KYGATEELRKHADNMVALLTPVAKAFMTDVAFDSAVMGQQVYGGHGYIREWGQEQHVRDI 434

Query: 438 PANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               I  G+     +D++    L     L   L   +     S+G     +    +   +
Sbjct: 435 RITQIYEGTNGIQAMDLIGRKTLAVDGGLLALLAEEIRAYCASAGDDHSHLAEALLCALE 494

Query: 496 EDKGLARFL 504
             +   + +
Sbjct: 495 GLEASTQHI 503


>gi|121592565|ref|YP_984461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604645|gb|ABM40385.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 385

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 135/373 (36%), Gaps = 29/373 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSV 156
           E   A    +R     GL        F  +      + R    L   A      + +   
Sbjct: 35  EIPEAIVQEMR---ELGLFGMTIPEKFGGLELTMEEECRVLFELCQTAPAFRSIIGTTVG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  + +  TP     W PK+ + E             V     LTE   G+D A++ +
Sbjct: 92  IGSQGILMDGTPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRL 275
              K  D        ++  ++P +  F ++A+      G   V   + D    G+ + + 
Sbjct: 139 TAIKDGDHYIVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIVDAKTPGISFGKY 198

Query: 276 KNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G R   T ++ F N          L    G    MK+L    +  A ++V   +  
Sbjct: 199 DKKMGQRGAHTCDVIFDNVKVPAANLIGLQEGRGFKTAMKVLEKGRIHIAAVAVGVAQRI 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S E  
Sbjct: 259 LRDALAYALERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTE-- 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A   K +  +M   V   A++ +GG+GY+ E  I R YR+     +  G+     
Sbjct: 317 -----ASCAKMFATEMCGRVADRAVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQ 371

Query: 452 LDVLNLLEKGTNL 464
           + +   + +    
Sbjct: 372 IIIARNMVREARA 384


>gi|313111862|ref|ZP_07797654.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310884156|gb|EFQ42750.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 598

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/488 (17%), Positives = 174/488 (35%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++    E ++        L+      G  +D   V     +     + +  G +    
Sbjct: 36  DMVAAILDEGSKFCEQVLAPLNRSGDEEGCHFDNGVVSTPKGFKEAYAQYVEGGWNGVAS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   + +  G     +  + S +    +      +  ++ +
Sbjct: 96  DPAYGGQGLPHSLGLLLSEMIGASNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   GTD+  I ++    +DG + +SG K F+S+   
Sbjct: 156 GTWTGT-------------MCLTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEH 202

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+VP+ L D     G  N +    +++K+G +++
Sbjct: 203 DMSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDAAGEAGVRNAVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L + +  +     S   A+ YAR R  
Sbjct: 263 ATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        AL++  A   D      +A  R
Sbjct: 323 MRSLTGPKAPDKPADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAER 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A     + PI K +  +    V    M+  GG GYI E  + +  R+     I  G+
Sbjct: 383 ERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L     G    L       + Q   +  +     L+  ++           L
Sbjct: 443 NGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQAEH--PQLKGQVAQLAALNAQWGEL 500

Query: 505 TEKIALAS 512
           T+++ LA+
Sbjct: 501 TQQVGLAA 508


>gi|9965284|gb|AAG10019.1|AF282240_3 acyl-CoA dehydrogenase [Acinetobacter sp. SE19]
 gi|14587418|dbj|BAB61751.1| acyl-CoA dehydrogenase [Acinetobacter sp. NCIMB9871]
          Length = 384

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 135/362 (37%), Gaps = 26/362 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++    GL        +E +    +     A  L   +      + + +   +S + 
Sbjct: 39  EIVQQMKELGLFGLTIPEEYEGLGLTMEEEVYIAFELGRTSPAFRSLIGTNNGIGSSGLI 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  +    + + P++ S E             +     LTE   G+D A++ +   K  D
Sbjct: 99  IDGSEEQKQYFLPRLASGE-------------IIGSFCLTEPDSGSDAASLKTTAVKDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  F ++A+    + G   +   + D    G+   +   K+G +
Sbjct: 146 HYILNGTKRYITNAPHAGVFTVMARTSTEIKGTGGISAFIVDSKTPGISLGKRDKKMGQK 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F N        +      G    MK+L    +  A +SV      L +++ Y
Sbjct: 206 GAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVLDKGRIHIAALSVGAATRMLEDSLQY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A 
Sbjct: 266 AVERKQFGQAIANFQLIQGMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   +
Sbjct: 319 CAKMFATEMCGRVADRGVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIARNM 378

Query: 459 EK 460
            +
Sbjct: 379 IR 380


>gi|127513498|ref|YP_001094695.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638793|gb|ABO24436.1| isovaleryl-CoA dehydrogenase [Shewanella loihica PV-4]
          Length = 389

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 141/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P  + L       GL        +    +   AH +    +   +   
Sbjct: 33  PIAAKVDQENAFP--NELWPVLGEMGLLGVTVPEEYGGADMGYLAHVVAMEEISRASASI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQINRNGNAEQKAKYLPKLVSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  + P +D +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLSARKEGDRYILNGNKMWITNGPDADTYVIYAKTDMDKGPHGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +       + N+  G    +K+L+  LD   + +S
Sbjct: 198 KGFSQAQKLDKLGMRGSNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLS 254

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +  A       Y   R   G  +    +++  +AD+   + AA +  + +A S D
Sbjct: 255 GGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYVYNVAKSCD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  ++A  +  +A++ +GG+GY+ E +  R  R++    
Sbjct: 315 RGETTRKDAAGA-------ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|9789985|ref|NP_062800.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Mus
           musculus]
 gi|66773808|sp|Q9JHI5|IVD_MOUSE RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|7025453|gb|AAF35888.1|AF225989_1 isovaleryl dehydrogenase precursor [Mus musculus]
 gi|7689117|gb|AAF67667.1| isovaleryl CoA dehydrogenase [Mus musculus]
 gi|17390762|gb|AAH18325.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|20073124|gb|AAH27198.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|126541071|emb|CAM46006.1| isovaleryl coenzyme A dehydrogenase [Mus musculus]
 gi|148695982|gb|EDL27929.1| isovaleryl coenzyme A dehydrogenase [Mus musculus]
          Length = 424

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+           ++    G+        +         H +    +   +   
Sbjct: 64  PKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 124 GLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEF-------------IGALAMSEPNA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  ++ A+ +         +   + + 
Sbjct: 171 GSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAVPASRGITAFIVEK 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +            +     +     L  L  A 
Sbjct: 231 GMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAG 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   + A+    + +A + DE
Sbjct: 291 GPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMASRQYVYNVAKACDE 350

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +  + A  V  + ++C+GG+GYI +  + R  R++    I
Sbjct: 351 GHIIPKD-------CAGVILYAAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI 403

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 404 GAGTSEVRRLVIGRA 418


>gi|317498919|ref|ZP_07957203.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316893844|gb|EFV16042.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 140/376 (37%), Gaps = 32/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+ E       LL +    GL    + + +            A  +  +++++A   
Sbjct: 30  RDMDEAEKFDM--DLLDKMKKYGLMGIPYSKEYGGEGADV--LTYALAMEEVSKVDASAG 85

Query: 152 MSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           ++ SV      S +    +    + +               P+   S     GLTE   G
Sbjct: 86  ITISVHTSLCCSCINDYASEEQKQKFL-------------RPLVDGSKTGCFGLTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD + + +  +   D  Y L+G K F ++   +D FI+ A  +   G   +   + D   
Sbjct: 133 TDASGVKTTAKLDGDH-YVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGMSAFIVDRDS 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   +   ++G R+ +  E+   +       L+G   +             +     S
Sbjct: 192 EGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALAGGRIGIGAQS 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L EAI Y + R   G  +      +  IA +   I AA  + +R A + D+ +
Sbjct: 252 VGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARLMVWRAAKAKDDHE 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + +        +A   K +   +A  V   A++ +GG GY  E  + R YR++    I  
Sbjct: 312 NFA-------PLAAQCKLFASDVAVEVTRGAVQMLGGYGYSREYPVERMYRDAKITEIYE 364

Query: 445 GSGNAMVLDVLNLLEK 460
           G+  AM + V   L +
Sbjct: 365 GTSEAMKMIVGGGLLR 380


>gi|302550078|ref|ZP_07302420.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467696|gb|EFL30789.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 390

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 125/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  +    +     ++       A+L  G  +S    ++  +A   T     +  P +
Sbjct: 63  PYDSEYGGGDQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALAAYGTKEQQVEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D AA+ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPHSGSDAAALRTKAVREGDDWVINGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
           ++D   ++A+  G  G   +   L  G   G+     + K+G + + T ++ F +     
Sbjct: 170 IADFCTVMART-GEEGPRGITAFLVPGDAPGVSAAAPEKKMGMKGSPTAQVHFDDVRVSD 228

Query: 297 -FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+                L  A  ++   + +L EA+ YA +R   G  + D   +
Sbjct: 229 DRRIGEEGQGFAIALSALDSGRLGIAACAIGVAQAALDEALAYAAQRRQFGKPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D  +  + +AA A       K  C   A  V  +A
Sbjct: 289 RFMLADMATQIEAGRALYLAAARLRDAGRPFARQAAMA-------KLHCTDTAMRVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 342 VQILGGYGYTADFPAERYMREAKVLQIVEGTNQIQRMVIARHL 384


>gi|323528314|ref|YP_004230466.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385316|gb|ADX57406.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 393

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 144/412 (34%), Gaps = 39/412 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + +E+E+L + +    A+E+A              P     D+ +  P    L R+   
Sbjct: 10  PLGEEVEMLRDSLAGFAAKEIA--------------PRAAEIDRTDQFPM--DLWRKFGD 53

Query: 113 DGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            G+        +    +   AH +    +   +        + S    + +    T    
Sbjct: 54  LGVLGMTVSEEYGGANMGYTAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGTEAQK 113

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+                L ++E   G+D+ ++  +  K  D        
Sbjct: 114 QKYLPKLVSGEH-------------VGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGTK 160

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P  D  ++ A+ +       +   + +    G    +  +K+G R + T EL F
Sbjct: 161 MWITNGPDCDTLVVYAKTDIEAQSRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVF 220

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSG 346
            +        L    G V+ +  +  LD     ++G    +  A     + Y   R   G
Sbjct: 221 EDVEVPQENILGQLNGGVKVL--MSGLDYERAVLAGGPTGIMVAVMDAVVPYIHDRKQFG 278

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  IAD+   + A  A  + +    D      E     R        +  +
Sbjct: 279 QSIGEFQLIQGKIADLYTTLQACRAYLYAVGRQLDT--LGKEHVRQVRKDCAGVILYTAE 336

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A  +  EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 337 KATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|224825721|ref|ZP_03698825.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224601945|gb|EEG08124.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 389

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    PA   L ++    GL     +  +    +   AH I    +   +   
Sbjct: 30  PRAADIDRDNLFPA--DLWKKFGDLGLLGITVEEEYGGSNMGYLAHMIAMEEISRASASV 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +      + PK+ S E+                L ++E   
Sbjct: 88  ALSYGAHSNLCVNQIRKNGSAAQKAKYLPKLISGEH-------------VGALAMSEPNA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  +   +D  ++ A+ +   G   +   + +   
Sbjct: 135 GSDVVSMKLRADKKGDRYVLNGSKMWITNGGDADTLVVYAKTDVNAGPKGITAFIVEKGF 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  + F +        L      V+ +   +  + A+++   
Sbjct: 195 KGFTHGSKLDKLGMRGSNTYPIFFDDCEVPAENILGKEGEGVKVLMSGLDFERAVLAAGP 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + D  +M+  +AD+ + ++A+ A  + +  + D  +
Sbjct: 255 LGIMQACMDVVVPYLNDRQQFGQAIGDFQLMQGKLADMYVKLSASRAYVYAVGQALDRGE 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S  +     R  A     +  + A  +  +A++C+GG+GYI E    R  R++    I  
Sbjct: 315 SGRQ----TRKDAAGAILYAAENATQMALDAIQCLGGNGYINEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+       +   L   T 
Sbjct: 371 GTSEIRRWLIGRELMAETR 389


>gi|91784793|ref|YP_559999.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91688747|gb|ABE31947.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 596

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/472 (19%), Positives = 189/472 (40%), Gaps = 65/472 (13%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWD 121
              +E A++ +     L      G+R      D V    P +    R+    G       
Sbjct: 39  AVLEESAKLCSE---VLAPLNVEGDRNPSSWKDGVVTATPGFREAFRQFGEGGWQGVQHP 95

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIF 179
             +E     +   I  A + ++        + P +T  ++ AL+T  +    + + P++ 
Sbjct: 96  VHYEGQGLPK--LIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPRLI 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE + G+D+A + ++ +   DG + L G K F++   
Sbjct: 154 SGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGE 200

Query: 240 SDA-----FIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA+          +  F+VP+ L +     G  N +    +++K+G ++
Sbjct: 201 HDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSLGERNDVHCVSIEHKLGIKA 260

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  L+F +     G L+G+ N     +  M         +  +     +  +A+ YA+
Sbjct: 261 SPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAK 320

Query: 341 RRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            R  S            +I  P ++R +A +     A+ AL++  A   D A   ++EA 
Sbjct: 321 DRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEAT 380

Query: 392 YARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            A+  A      PI K W  +++  V +  ++  GG G+IEE   A++YR++    I  G
Sbjct: 381 RAQHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEG 440

Query: 446 SGNAMVLDVLNL--LEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSIS 492
           +      D++    +  G  + + L + +    + LG+        ++  ++
Sbjct: 441 TTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQGPAFASMKKYLA 492


>gi|311696587|gb|ADP99460.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 689

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/492 (18%), Positives = 172/492 (34%), Gaps = 58/492 (11%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E  +      +P   +    G + D  +V     +    ++    G      
Sbjct: 120 DIVDAILGECGKFCEEVLSPLYLSGDEEGCKLDNGEVTTPAGYRDAYQQYAMGGWQGLSA 179

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +       +  +    +   A          S+ + + + L  T    + +      
Sbjct: 180 PEEYGGQGLPASMGLLKQEMMGTANWPFSMYPGLSLGAMNTIFLHGTEDQKQTYL----- 234

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                   AP+ +   A  + LTE + GTD+  + ++ +  +DG Y L+G K F+SS   
Sbjct: 235 --------APLTEGRWAGTMCLTEPQCGTDLGQVKTKAEPQADGSYRLTGTKIFISSGDH 286

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L D     G  NG+    L+ K+G +++
Sbjct: 287 DLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPDSNGDVGERNGVVCGSLEKKMGIKAS 346

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH- 343
           AT  L F    GFL+G  N     +        + +AI  V    +S   A+ YA+ R  
Sbjct: 347 ATCVLNFDGATGFLIGPENDGLNCMFTFMNTARIGTAIQGVGPAELSYQWALAYAKDRRS 406

Query: 344 ---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EA 383
              +SG          LI    ++R +           A+ +  A   D         + 
Sbjct: 407 MRALSGKKEPDQVADSLIHHADVRRMLLTQKAIAEGGRAMLYYAARLADHMVEGFTEGDE 466

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +       + PI K +  ++        ++  GG GYI E  + +  R++   ++ 
Sbjct: 467 KKADKYDDKLGFLTPILKGFLTELGCEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLY 526

Query: 444 LGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
            G+     LD+L    LL        +    +     +        LR       +  G 
Sbjct: 527 EGTTGIQALDLLGRKVLLMTQGGAVREFTLNIANF--ARKHLTDKRLRPWALELLKLTGQ 584

Query: 501 ARFLTEKIALAS 512
              LT +I LA+
Sbjct: 585 WNLLTVRIMLAA 596


>gi|332017158|gb|EGI57957.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior]
          Length = 390

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 134/377 (35%), Gaps = 28/377 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAG 149
               D+           ++    GL        +         H I    +   +     
Sbjct: 31  AAEIDQKNNFDELKTFWKQMGKLGLLGPTVKPEYGGAGCTYLDHVIIMEEISRASAAIGL 90

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + +    T    + + PK+ S E+                L ++E   G+
Sbjct: 91  SYGAHSNLCVNQIHRNGTEEQKQKYLPKLCSGEH-------------IGALAMSESGAGS 137

Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           D+ ++  + ++  D  Y L+G+K W  ++P +D  I+ A+ +         +   + +  
Sbjct: 138 DVVSMKLRAERKGD-YYVLNGNKFWITNAPDADTLIVYARTDPNVDKPKHGITAFIVERD 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G       +K+G R + T EL F +       +LG++N     +     L  L     
Sbjct: 197 TEGFSTGEKLDKLGMRGSNTGELIFEDCKVPAANVLGEINKGIYVLFSGLDLERLILCGG 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M+     A  YA  R   G  L    +++  IA++   ++A+ +  + +A S D  
Sbjct: 257 PLGIMQACCDVAFEYAHTRQQFGQYLAKFQMIQAKIANMYTALSASRSYVYSVARSCDAG 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +              +  + A  + ++A++ +GG+GY  + +  R  R++    I 
Sbjct: 317 HINRK-------NCAAVLLFSAENAMKMASDAVQILGGNGYTNDYATGRLLRDAKLYEIG 369

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   + +
Sbjct: 370 AGTSEVRRIVISRAITE 386


>gi|241766996|ref|ZP_04764787.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241362494|gb|EER58407.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 385

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 136/372 (36%), Gaps = 29/372 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSV 156
           E   A    +R     GL        F  +      + R    L   A      + +   
Sbjct: 35  EIPEAIVQEMR---ELGLFGMTIPEKFGGLELTMEEECRVLLELCQTAPAFRSIIGTTVG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  + +  TP    +W PK+ + E             V     LTE   G+D A++ +
Sbjct: 92  IGSQGILMDGTPEQQAEWLPKLATGE-------------VIASFALTEPEAGSDAASLRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRL 275
              K  D        ++  ++P +  F ++A+      G   V   + D    G+ + + 
Sbjct: 139 TAIKNGDHYIVNGTKRYITNAPHAGMFTLMARTNPDDKGAGGVSSFIVDAKTPGISFGKY 198

Query: 276 KNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G R   T ++ F N          L    G    MK+L    +  A ++V   +  
Sbjct: 199 DKKMGQRGAHTCDVIFDNVRVPAANLIGLQEGRGFKTAMKVLEKGRIHIAAVAVGVAQRI 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA  R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S E  
Sbjct: 259 LRDALAYALDRKQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDDGHNVSTE-- 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A   K +  +M   V   A++ +GG+GY+ E  I R YR+     +  G+     
Sbjct: 317 -----ASCAKMFATEMCGRVADRAVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQ 371

Query: 452 LDVLNLLEKGTN 463
           + +   + +   
Sbjct: 372 IIIARNMVREAR 383


>gi|125978166|ref|XP_001353116.1| GA19744 [Drosophila pseudoobscura pseudoobscura]
 gi|195173458|ref|XP_002027508.1| GL10298 [Drosophila persimilis]
 gi|54641867|gb|EAL30617.1| GA19744 [Drosophila pseudoobscura pseudoobscura]
 gi|194114409|gb|EDW36452.1| GL10298 [Drosophila persimilis]
          Length = 420

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 134/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK++         R+    G      +  +         H I        A   
Sbjct: 60  PYAKEIDKLDNFKEMRPFWRKLGDLGFLGITAEPDYGGTGGSYLDHCIIMEEFSRAAGGV 119

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    TP   + + PK+ + E+               GL ++E   
Sbjct: 120 ALSYGAHSNLCINQLTKNGTPEQKEQYLPKLCNGEH-------------IGGLAMSEPGA 166

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D+ ++  + ++  D         W  +   +D  I+ A+  G        +   + + 
Sbjct: 167 GSDVVSMKLRAERKGDYYVLNGSKFWITNGSDADTLIVYAKTGGSGVADKHGITAFIVET 226

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R ++T EL F +       +LG  N     +        L  A 
Sbjct: 227 GWEGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNILGKENKGVYVLMSGLDFERLVLAA 286

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D 
Sbjct: 287 GPVGLMQAACDVAFDYAHQRKQMSQLIGEFQLVQGKMADMYSTLSACRSYLYTVARSSDA 346

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +C + A  V  +A++ +GG+GYI +    R  R++    I
Sbjct: 347 GNRSPKD-------CAGVILYCAEKATQVALDAIQILGGNGYINDNPTGRILRDAKLYEI 399

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 400 GAGTSEIRRWLIGRQLNQ 417


>gi|242010281|ref|XP_002425897.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212509873|gb|EEB13159.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 393

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/370 (17%), Positives = 129/370 (34%), Gaps = 31/370 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI-RAARLYLMAQLEAGHLMSPSV 156
           E      A++     +GL     D  +          I     L  +    +  +   + 
Sbjct: 43  ETSDMEPAVVDMLFQNGLMGIEIDEKYGGTGCNFMVTILSVEELSKVDAAVSTLVCVHNT 102

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
              S+V  +        + P +                  A    LTE   G+D  ++ +
Sbjct: 103 LVCSLVMKVANEAQKSHYLPIL--------------AQQKAGSFCLTEPTSGSDAFSLKT 148

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +K  D         W  +S ++  F++ A          +     D    GL   + +
Sbjct: 149 IAKKDGDDFIINGSKMWISNSDIAQVFLVFANANPESSYKGITAFFVDRDTPGLSVAKKE 208

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA 335
           +K+G R++ T  + F N         N+     +  K    +L+   +++    + +A+ 
Sbjct: 209 DKLGIRASGTCMVHFDNVRVPKT---NILGEYGQGYKYAAGFLNEGRIAIGSQMLGVAQG 265

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y   R      + D   M+  IADIA  I AA  L +  A   +  +S  +EA
Sbjct: 266 CFDATIPYTLDRKQFRQSIYDFQSMQHQIADIATKIEAARLLVYNAARLVETKQSFVKEA 325

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +  ++A  V  + ++ +GG G+ ++    + YR+    +I  G+ N  
Sbjct: 326 SMA-------KLYATEIAHDVTRKCIDWMGGVGFTKDFPQEKFYRDCKIGTIYEGTSNMQ 378

Query: 451 VLDVLNLLEK 460
           +  +   ++ 
Sbjct: 379 LSTIAKYIKN 388


>gi|332557937|ref|ZP_08412259.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332275649|gb|EGJ20964.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 385

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 142/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   R D+    PA   L R     GL        F    +   AH +    +   +   
Sbjct: 31  PMAARIDRENVFPA--ELWREMGELGLLGITVPEEFGGSDMGYLAHTVAVEEVARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  +P     + PK+ S E+                L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIRLNGSPEQKARYLPKLVSGEH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMRLKAEKRNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T EL F N         NV     + +++L+  LD       
Sbjct: 196 TGFSTSPHFDKLGMRGSNTGELIFENCEVPF---ENVLGQDGKGVRVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    M   L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D
Sbjct: 253 GIGTGIMAACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +AA           +  + A     +A++ +GG+GY+ +  ++R +R++    
Sbjct: 313 AGRVTRADAAG-------CVLYASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L  G
Sbjct: 366 IGAGTSEIRRMLIGRELMAG 385


>gi|186472405|ref|YP_001859747.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194737|gb|ACC72701.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 393

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 148/412 (35%), Gaps = 39/412 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + +E+E+L + V S  A+E+A              P     D+ +  P    L ++   
Sbjct: 10  PLGEEIEMLRDSVASFAAKEIA--------------PRAGEIDRTDQFPM--DLWKKFGD 53

Query: 113 DGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            G+        +    +   AH I    +   +        + S    + +    T    
Sbjct: 54  LGVLGMTVSEEYGGANMGYTAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQK 113

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S ++                L ++E   G+D+ ++  + QK  D        
Sbjct: 114 EKYLPKLVSGDH-------------VGALAMSEPNAGSDVVSMKLRAQKKGDRYVLNGTK 160

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P  D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F
Sbjct: 161 MWITNGPDCDTLVVYAKTDIEAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVF 220

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSG 346
            N        L    G V+ +  +  LD     ++G    +  A     + Y   R   G
Sbjct: 221 DNVEVPEENILGELNGGVKVL--MSGLDYERAVLAGGPTGIMLAVMDAVVPYIHDRKQFG 278

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD+   + A  A  + +    D     S  A   R        +  +
Sbjct: 279 QSIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT--LGSGHARQVRKDCAGVILYTAE 336

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A  +  EA++ +GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 337 KATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|89100481|ref|ZP_01173343.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89084824|gb|EAR63963.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 379

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 131/377 (34%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  P    +  +  + G+    +   +                   A    
Sbjct: 26  PGALERDRTKEFP--KEIFNKLSNMGVMGLPFPEEYGGGGADTVSFAIVTEELSRACGST 83

Query: 149 GHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G   S  ++       L  T    + +   I + E                  GLTE   
Sbjct: 84  GITYSAHISLGGAPLYLFGTEEQKQQYLVPICTGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGS 266
           G+D     +      DG + ++G K ++++      + + A   G      +  ++    
Sbjct: 131 GSDAGGTRTSA-AEKDGEFIINGSKCYITNASYAKHLAITAVTGGSGADKEISAIIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G        K+G  ++ T EL   +        L       +    LI LD   + + 
Sbjct: 190 AEGFKVIDNYEKMGLNASNTTELVMEDVRVPTEHLLGKKGEGFKQF--LITLDGGRIGIG 247

Query: 327 GMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+A +     YA+ R   G  L     ++  +AD+A+ I  A  + ++ A   D
Sbjct: 248 AMAVGIAQAAYEKALQYAKERTQFGRSLSQFQAIQFKLADMAMKIELARNMVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K  ++EA+         K +  ++   V  +A++  GG GY+++  + R+ R+     
Sbjct: 308 QGKPFTKEASM-------CKLYASEICMEVADQAVQIHGGYGYMKDYHVERYMRDGKLTE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 361 IGEGTSEIQRMVIARQI 377


>gi|99080573|ref|YP_612727.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99036853|gb|ABF63465.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 387

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 143/399 (35%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P  +  D+    PA   L +     GL     D  F
Sbjct: 7   TFDLGEDVNALRDMVHRWAQERVKPMAQEIDQKNEFPA--ELWKEMGELGLLGITVDEEF 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L         + P++ S E+
Sbjct: 65  GGAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNAEQKAKYLPRLISGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDRFVLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPGAGSKGITAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A +    M   + E + Y   R   G  + +  +M+  IA
Sbjct: 232 EEGKGVRVLMSGLDYERVVLAGIGTGIMASCMDEMMPYMAERKQFGQPIGNFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A A  + +A + D+     ++AA           +  ++A     +A++  G
Sbjct: 292 DMYTAMNTARAYVYEVAKACDKGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 345 GAGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|170737680|ref|YP_001778940.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819868|gb|ACA94450.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 377

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EMLAPNAAQWDHDAHLPD--AIVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
            A M    +     LTE   G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 112 -ADMAAGRLIGAFCLTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|254463326|ref|ZP_05076742.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206679915|gb|EDZ44402.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 593

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/532 (19%), Positives = 184/532 (34%), Gaps = 79/532 (14%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDGLHCSIW 120
               +E  ++    T  LH     G++         V     + A   +    G      
Sbjct: 38  GAVLEEAGKIC---TDVLHPLNVVGDKEGCTLENGVVRTPTGFKAAFDQVKEGGWTGLDM 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +               L+  +          +  +AS +    T      + P + S
Sbjct: 95  PEQYGGQNMPALMGTAVGELFSASNQAFTMYQGLTHGAASAILAHGTDEQKDKYLPNMVS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++     DG Y +SG K F+SS   
Sbjct: 155 CEWTGT-------------MNLTEPHCGTDLGLMRTKAAPQDDGSYKISGQKIFISSGEH 201

Query: 241 DA-----FIMLAQVEGRV-GCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++EG   G   V   +            G+ NG+    ++ K+G   N
Sbjct: 202 DMADNIIHLVLAKIEGGPEGIKGVSLFIVPKFNINEDGSLGARNGVAVGSIEEKMGIHGN 261

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           +T  + +    G+LLGD +     +  M     L   +  ++    +   A+ YA+ R  
Sbjct: 262 STCVMNYDEATGYLLGDEHKGMRAMFTMMNEARLGVGMQGLAQADAAYQNAVDYAKDRLQ 321

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
                           LI  P ++R++ D       A A     A   D+A    ++ A 
Sbjct: 322 GRAVTGTENPGGPADPLIVHPDIRRSLMDQKSFTEGARAFLLWGATMIDDAHRSGDKDAD 381

Query: 392 -YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ P+ K +       +  +A +  GG GYIEE  ++++ R++    I  G+    
Sbjct: 382 GLVSLLTPVIKGFLTDQGYDMTVKAQQIYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQ 441

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS--LCKEDKGLARFLTEKI 508
            LD++                L QD G        +++        ++D   A F+    
Sbjct: 442 ALDLVG-------------RKLAQDGGKHVMAFFDLVKTFCKENAGQDDAYDAEFIE--- 485

Query: 509 ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            L +S+  L  AGM      F++N   +  H     L G  +  H+   + L
Sbjct: 486 PLKASSKDLQAAGM-----YFMQNGMKNPNH----ALAGANDFMHMFGHVCL 528


>gi|90417367|ref|ZP_01225292.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
 gi|90330809|gb|EAS46078.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
          Length = 388

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    L R+    GL     D  +        AH +    +   +   
Sbjct: 33  PRAAEIDQSNEFPM--DLWRKFGDMGLLGITVDEEYGGSGMGYLAHSVAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +A   +      + PK+ S ++                L ++E   
Sbjct: 91  GLSYGAHSNLCLNQLAKNGSHEQKLKYLPKLCSGDH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++     K  D         W  + P +  +I+ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLSATKQGDHYLLNGNKMWITNGPDAHTYIIYAKTDTSAGSKGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  +  ++S   
Sbjct: 198 PGFSRHQKLDKLGMRGSNTCELVFQDCAVPAENILGGEGCGVAVLMSGLDYERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  L   + Y   R   G  + +  +M+  IAD+  D+ A+ A  + +A + D A+
Sbjct: 258 VGIMQACLDVVLPYIHERSQFGQAIGEFQLMQGKIADMYADLNASRAYLYAVARACDLAQ 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A  +  + ++ +GG+GY  E    R  R++    I  
Sbjct: 318 DSRKDAA-------AVILFTAEKATQMALQTIQALGGNGYTNEYPAGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEVRRMLIGREL 384


>gi|46136291|ref|XP_389837.1| hypothetical protein FG09661.1 [Gibberella zeae PH-1]
          Length = 412

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 143/381 (37%), Gaps = 36/381 (9%)

Query: 89  PGGERWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+  E  PA   ++ +    GL        +          I        A   
Sbjct: 55  PRARDMDEAEEMDPA---VVEQLFEQGLMGIEIPEEYGGAGMNFTAAIIGIEELARADPS 111

Query: 148 AGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              L+    T   + +    +  + K W P++               T+      L+E  
Sbjct: 112 VSVLVDVHNTLCNTAIIKHGSTAIKKKWLPRL--------------ATNTVASFCLSEPV 157

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A+ ++  + +DG        W  +S  +D FI+ A ++   G   +   L +  
Sbjct: 158 SGSDAFAMATRATETADGFKINGSKMWITNSKEADLFIVFANLDPSKGYKGISAFLVEKG 217

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G    + + K+G R+++T  + F +     +   N+     +  K  I  L+   + +
Sbjct: 218 MKGFSIAKKEKKLGIRASSTCVINFDDV---EIPKENLLGERGQGYKYAISILNEGRIGI 274

Query: 326 SGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +     LA      A  Y    R   G ++ +   M+  +A    +I AA AL +  A  
Sbjct: 275 AAQMTGLALGAFDNAARYVWNDRKQFGSLVGEFQGMQHQLAQAYTEITAARALVYTAARK 334

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    +++R+S  
Sbjct: 335 KEAGEDFVKDAAMA-------KLYASQVAGRVSGSAIEWMGGMGFVREGLAEKYFRDSKI 387

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 388 GAIYEGTSNIQLNTIAKLLQK 408


>gi|77360399|ref|YP_339974.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875310|emb|CAI86531.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 385

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 139/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q  A+ A           P   +WD+    P     ++ +   G        
Sbjct: 2   DFNLSDDQQAFAQTARQFAD--SELAPYAAKWDREHIFP--KDTIKAAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M       +++    +  MVA   T      +  ++ +  
Sbjct: 58  EAGGLGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMVASFGTDAAKDKYCEQLVTG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                        +     LTE   G+D A++ ++  +  D  Y ++G K F+S    ++
Sbjct: 117 ------------DLLASYCLTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+     G   +   +      G+ Y + + K+G  +  T  + F +       L
Sbjct: 164 VLVVMARTGCD-GPKGISAFIVPADAKGVEYGKAEEKMGWNAQPTRLISFEDVRIPAHNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++ A  S+   + +L  A  Y + R   G  L     ++  
Sbjct: 223 LGAEGEGFKFAMQGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+  ++ AA  +    A   D   S             + K +   +   V  +A++ 
Sbjct: 283 IADMNTELVAARQMVRLAAFKLDNNDSEK------TTYCAMAKRFATDVGFTVCNDALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH R+   + IL G+   M + +   +
Sbjct: 337 HGGYGYIKEYPLERHVRDVRVHQILEGTNEIMRVIIARRI 376


>gi|163848704|ref|YP_001636748.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222526646|ref|YP_002571117.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163669993|gb|ABY36359.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450525|gb|ACM54791.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 379

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 140/365 (38%), Gaps = 34/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--- 161
            L+R+    GL        +        +   A  +  +++++    +  SV ++ +   
Sbjct: 40  ELVRKMGELGLMGVAVSEEYGGAGMD--YVSYAIVIEELSRVDPSLGVIASVNNSLVCYG 97

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    ++    + S               +     L+E   G+D AA  +   + 
Sbjct: 98  IEKFGTEEQKRELLVPLASG-------------RMLGAFSLSEPGAGSDAAAQRTTAVRD 144

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  +   +D  I++A  +   G   +   L D    G    +++NK+G 
Sbjct: 145 GDYYVINGVKNWVTNGDHADTIILMAMTDPSKGTKGITAFLVDTHAPGCRVVKVENKLGI 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----A 335
           RS  + ++ + +   + +          +  KI +  L++  + ++   V +A+     A
Sbjct: 205 RSAHSCQMAYDD---YRIPAWRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAFEAA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  + +   +   +AD+A  I AA  L++  A   D+     ++A+ A  
Sbjct: 262 LEYSKVREQFGKPIHEFQAVGFTLADMATRIKAARLLTYEAAWRKDQGLDFIKDASMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A  V  +A++  G +GY +E  + R +R++    I  G+     L + 
Sbjct: 320 -----KLFASETAMWVATKAVQLHGSNGYSKEYPVERFFRDAKITEIYEGTSEIQRLVIS 374

Query: 456 NLLEK 460
             L +
Sbjct: 375 RELVR 379


>gi|116054234|ref|YP_788678.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313111860|ref|ZP_07797652.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|115589455|gb|ABJ15470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310884154|gb|EFQ42748.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 592

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 184/498 (36%), Gaps = 60/498 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDK--VEFHPAWHALLR 108
            +L  L E V + TA  +   A   T     P        G +W+   V     +    R
Sbjct: 26  AQLPALAEVVDAETAAAILEEAGKVTAGTIAPLNRPGDEEGCQWNAGAVSTPAGFPEAYR 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MT 166
                G      D ++  +   +   I A    L+        + P +T+ + +AL    
Sbjct: 86  TYAEGGWVGVGGDPAYGGMGMPK--VISAQVEELVNSANLSFGLYPMLTAGACLALNAHA 143

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y
Sbjct: 144 SDELKDKYLPNMYAGIW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSY 190

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            +SG K F++    D       ++LA++         +  FLVP++L +     G  N L
Sbjct: 191 KISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVNADGSLGEKNSL 250

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++AT  + F    G+L+G++N     +  M     L   I  ++    
Sbjct: 251 GCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKGLAAMFTMMNYERLGVGIQGLATGER 310

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   AI YAR R  S               +I  P ++R +  +        A S  +A 
Sbjct: 311 SYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAM 370

Query: 379 SFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D AK      +R        ++ P+ K +   M         +  GG G+I E    +
Sbjct: 371 QLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGHGFIREWGQEQ 430

Query: 433 HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
             R+     I  G+     LD++   ++  G          ++  + S+ + +    +  
Sbjct: 431 LVRDCRITQIYEGTNGIQALDLVGRKVIGSGGAFSRHFTDEIKAFVASADEALGEFSKPL 490

Query: 491 ISLCKEDKGLARFLTEKI 508
            +  +  + L  +L ++ 
Sbjct: 491 AAAVENLEELTAWLLDRA 508


>gi|299768694|ref|YP_003730720.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298698782|gb|ADI89347.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 390

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ V 
Sbjct: 52  RDLWNKAGELGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYVN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E             V   + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------VVTAIAMTEPGTGSDLQAVRTTAVVDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  +++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 D-YVINGSKIFITNGYLCDMVVVVCKTGNNDKGSANLSLIIVEADRTGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      E K   E AA A     
Sbjct: 278 TKDRKAFGKPVSGFQNTRFKLAELRTEIDFCRTYLDRCMELQLEEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|256824703|ref|YP_003148663.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256688096|gb|ACV05898.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 389

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 135/380 (35%), Gaps = 30/380 (7%)

Query: 89  PGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P     D     P  A+ AL   +     H       +E +                   
Sbjct: 30  PAAAEVDATGEFPQAAYDALRETAF----HAPHIPEEYEGLGADALATCIVIEEVARGCA 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  + + +      + L  +  V + + P             P+ + +     GL+E  
Sbjct: 86  SSSLIPAVNKLGTMPLILAASEEVKQKYLP-------------PVAEGTAMFSYGLSEAG 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLED 264
            G+D A +  +  + SDG + L+G K W  ++ +S+ + ++A  +        +   + +
Sbjct: 133 AGSDTAGMQCKAIEQSDGSFVLNGQKSWITNAGVSEYYTVMAVTDPEGKRGKNITAFVVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G  +   + K+G + + T EL F N        +     G    ++ L    +   
Sbjct: 193 KDDEGFSFGEPEGKLGIKGSPTRELLFDNCVIPADRMVGERGRGLAIALQTLDHTRVTIG 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +L  A+ Y ++R   G  + D   ++  +AD+ + + AA  L +  A   +
Sbjct: 253 AQAIGIAQGALDAALDYVKQREQFGQRIADFQGVQFMLADMGMKLEAARQLVYNAAAKSE 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                              K +   +A  +  +A++  GG GY ++  + R  R++    
Sbjct: 313 RNDPA------LTYFGAAAKCFASDVAMEITTDAVQLFGGYGYTKDFPVERMMRDAKITQ 366

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L KG
Sbjct: 367 IYEGTNQIQRMVMARQLLKG 386


>gi|330941797|gb|EGH44546.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 308

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 120/319 (37%), Gaps = 23/319 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +P     + P++ S E+                L ++E   
Sbjct: 10  ALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEH-------------VGALAMSEPNA 56

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D +++ A+ +       +   + +   
Sbjct: 57  GSDVVSMKLRADKRGDHYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVERDW 116

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L V  G V  +   +  +  ++S   
Sbjct: 117 KGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRVLMSGLDYERVVLSGGP 176

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M+  +   + Y   R   G  + +  +++  +AD+   + A+ A  + +A + D  +
Sbjct: 177 TGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACDRGE 236

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  E ++ +GG+GYI E    R  R++    I  
Sbjct: 237 TTRKDAAG-------VILYSAERATQMALETIQILGGNGYINEFPAGRLLRDAKLYEIGA 289

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 290 GTSEIRRMLIGRELFNETR 308


>gi|313122484|ref|YP_004038371.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312296828|gb|ADQ69424.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 379

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 135/373 (36%), Gaps = 23/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P  H L+ ++    L        +                   A    
Sbjct: 26  PVAREHDEERKYP--HELVEKAAKYDLVAPSIPEEYGGAGMDMLTTAVITEELWRADPGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +       +M+       + ++W PK+                  A    ++E   G
Sbjct: 84  GSAIGSRGFGTTMIEKFGDEWMKEEWLPKV-------------AAGDTATCSCISEPAHG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A+I ++ ++  D         W  +  ++D  +++A+         +   L     +
Sbjct: 131 SDVASIETRAEEDGDEYVLNGTKMWITNGTIADVAVVMAKTTPGERHRGITAFLVPTDLD 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    ++ NK+G R++   E+   +       ++G ++     +           A  +V
Sbjct: 191 GFETTKISNKLGIRASDLAEVVLDDVRVPAENVIGAVDQGFYQLMTFFAGGRTSVAAQAV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  A  YA  R   G  + +   +   +A++A +I AA +L++R A   ++   
Sbjct: 251 GVGQAAVDAATDYANEREQGGQKIHEYQAVSHKLAEMATNIEAARSLTYRAATHVEDGDD 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           ++     A   A + K +  + A  V  E ++  GG+G++ +    R YR++    I  G
Sbjct: 311 QT-----AAKFASMAKLFASEQAVDVADEGIQVHGGAGFVTDHPAERFYRDARITKIYEG 365

Query: 446 SGNAMVLDVLNLL 458
           +       + + +
Sbjct: 366 TSEIQKNIIADQI 378


>gi|241554285|ref|YP_002979498.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863591|gb|ACS61253.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 381

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 147/402 (36%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE       +  AR A  +   L          D+    P    L       GLH    
Sbjct: 6   LGETA-DAIRETTARFAADHIAPL------AVEIDESNTFP--RQLWPEMGALGLHGITV 56

Query: 121 DRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + +    +P   + + PK+ 
Sbjct: 57  EEEFGGAGLGYLDHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWASPEQKRRYLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++  + +K  D         W  ++P 
Sbjct: 117 SGEH-------------VGSLAMSEVGAGSDVVSMRLRAEKKGDRYVLNGTKFWITNAPH 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ +   G   +  L+ +    G    +  +K+G R + T EL F +      
Sbjct: 164 ADVLVVYAKTDPAAGPKGISALIIEKGLPGFGVSKKLSKLGMRGSDTAELVFEDCAVPAE 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +      V+ +   +  + A+++   +  M+  L   + Y R R   G  + D  +M+
Sbjct: 224 ALMGREGEGVKILMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKAIGDFQLMQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + +A A  + +A + D  ++        R  A     +  + A  V  EA+
Sbjct: 284 GKIADMYVALNSARAYVYSVARACDAGRAT-------RTDAAAAILFASENAVKVSLEAI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 337 QALGGAGYTKEWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 378


>gi|253571951|ref|ZP_04849356.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6]
 gi|251838548|gb|EES66634.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6]
          Length = 568

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 176/469 (37%), Gaps = 48/469 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKENLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P++   E               + + LTE   G+D+ A+ 
Sbjct: 143 QDCIETLYEFGNADQHSRFIPRVCQGE--------------TMSMDLTEPDAGSDLQAVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R+++K+G   + T EL +      L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIEHKLGIHGSPTCELVYKKAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +ID P +   +A +   + A  AL ++ A   D          E
Sbjct: 309 NEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGRALLYQTARYVDIYKALDDISRE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L   + F T+      + L S  KK+      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETVPCSPEMEPLMSRLKKMADQFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           S +  KE +        AR L E  A       L +      AD+F ++
Sbjct: 489 STNAVKEAQDQELLDFTARRLMEMAADIIMCHLLIQDASKA-ADLFSKS 536


>gi|110834633|ref|YP_693492.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110647744|emb|CAL17220.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 380

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 144/371 (38%), Gaps = 27/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    L +++   G+        F         K+ A    +         
Sbjct: 31  DDWEEAGEFP--RELYKKAASAGILGINAPEEFGGTGEDIFMKVAACEELVRCSSGGLCA 88

Query: 152 MSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              S+           +  + +   P++                     L +TE  GG+D
Sbjct: 89  SLGSLDIGLPPVWKWGSEAMKQRVVPEVI-------------NGDKISALAITEPNGGSD 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +A + ++  +  D  Y ++G K F++S +   +  +A   G  G   +  LL +    G 
Sbjct: 136 VANLQTRAVRDGDH-YVVNGAKTFITSGVRADYYTVAVRTGDKGYGGISLLLIEKGTPGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  ++ T EL F +       L+G  N     +     +  L  A+ + S 
Sbjct: 195 TVGRKLKKMGWWASDTAELFFEDCRVPAENLIGPENGGFYCIMSNFQMERLVLAVTANST 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +++L EA+ Y + R   G  L    V +  +A++A D+ A+T  ++R+A      ++  
Sbjct: 255 AQLALDEALRYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTYRVAAKIAAGENCV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            + + A+ +A        + A  V  +A++  GGSGY+    + R +R++   SI  G+ 
Sbjct: 315 LDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLFRDNRILSIGGGTH 367

Query: 448 NAMVLDVLNLL 458
             M   +   +
Sbjct: 368 EIMNEVIAKQM 378


>gi|72384174|ref|YP_293528.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72123517|gb|AAZ65671.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 594

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/496 (19%), Positives = 194/496 (39%), Gaps = 68/496 (13%)

Query: 55  HKELELLGEYVLSCTA---------QELARMANYNTPQLHA---YGPGGERWDKVEFHPA 102
             ELE +G+      A         +E A+        L+      P   +   V   P 
Sbjct: 17  LAELEAVGQLPGFEEATPETAQAVLEEAAKFNEQVVAPLNRAGDLDPSSWKDGVVTTTPG 76

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    R+    G    +  + F+         I AA + ++        + P +T  ++ 
Sbjct: 77  FKDAFRQFGEGGWQGVMHPQEFDGQGLP--RLIAAACIEMLHSANLSFALCPMLTDGAIE 134

Query: 163 ALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           AL+T  +      + P++ S E+  T             + LTE + G+D+AA+ ++ + 
Sbjct: 135 ALLTAGSDEQKATFLPRLISGEWTGT-------------MNLTEPQAGSDLAAVRTRAEP 181

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED----- 264
             DG Y + G K F++    D       ++LA+          +  F+VP+ L +     
Sbjct: 182 QGDGTYKVFGTKIFITYGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNADGSL 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +  M         
Sbjct: 242 GARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFAVG 301

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATAL 372
           +  ++    +  +A+ YAR R  S            +I  P +KR +  +   +  A ++
Sbjct: 302 MQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRGLVEGARSV 361

Query: 373 SFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           ++  A   D A +  + A      A    + P+ K W  +++  V +  ++  GG G+IE
Sbjct: 362 AYVAAAICDVAHNHPDAAVRKESQAVYEFLVPVVKGWSTELSIDVTSLGVQVHGGMGFIE 421

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGSSGK 481
           E   A+HYR++   +I  G+       L     +  G  +   + + + +    LG  G 
Sbjct: 422 ETGAAQHYRDARILTIYEGTTAIQANDLVGRKTVRDGGAVARAICARIAETETALGKHGG 481

Query: 482 KVITILRDSISLCKED 497
              T ++  ++  +  
Sbjct: 482 AAFTAVQAQLAKGRAA 497


>gi|304321290|ref|YP_003854933.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303300192|gb|ADM09791.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 598

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 90/551 (16%), Positives = 196/551 (35%), Gaps = 65/551 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH-AYG 88
               M      +     + +  +        L E ++     E+A++A+     L+    
Sbjct: 6   PVRDMQFILEHAANFDAVRDIGAYDD-----LSEEIIDAVLTEVAKLADNVFAPLNWTSD 60

Query: 89  PGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G R +  +V   P +    +  +  G +   +   +          +        A +
Sbjct: 61  QQGARLENGQVYTTPGFKEAYQEYVEGGWNAVAFPEEYGGQGMPSTIALAVYDALSAACI 120

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                MS +  +   +    T      + PK+ + E+  T             + L+E  
Sbjct: 121 SLSMGMSLTQGAVKALLKYGTDEQKALYLPKMATAEWSGT-------------MNLSEPH 167

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGC 255
            G+D++ +  + + + DG + + G K ++S    D       ++LA++         +  
Sbjct: 168 AGSDLSQLKCKAEPVGDGTFKIKGTKCWISYGDHDLTENICHLVLARLPDAPEGTKGISM 227

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTG 307
           FLVP+   +     GS N +    ++ K+G   + T  + F    +  G L+G  N    
Sbjct: 228 FLVPKYRVNEDGSLGSRNDVNIVSIEEKLGQHGSPTCVISFGDDDDCLGTLVGKENEGLK 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRA 358
            +  M     +D  +   S    S  +A+ YA+ R               + + P ++R 
Sbjct: 288 NMFVMMNSARIDVGMQGTSASEASFQKALQYAQERPQGRPYGVRSGPQVPIYEHPDVRRQ 347

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVI 412
           +  +     A+ AL +  A + D A+  ++E           ++ P+ K +    A  V 
Sbjct: 348 LMTMRALTDASRALGYAAAIAHDIAEKATDEDVRRAAKEREDLLTPLAKAFPTDRAMEVT 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQL- 468
              ++  GG G++EE   A+ YR++    I  G+     +D++     + +G   F+ + 
Sbjct: 408 NHGIQIHGGMGFVEETGAAQFYRDARITQIYEGTNGIQAIDLVGRKLGMGEGKLAFDFMD 467

Query: 469 -FSTLEQDLGSSGKKVITILRDSISLC-----KEDKGLARFLTEKIALASSAAALYRAGM 522
             S L Q+L  S    +  +  ++           + + + ++       + A  Y    
Sbjct: 468 DISALSQELADSDNASLVAIGKALDTAVKELRDTTEYMIKAMSGTAEDGLAGATPYLDQF 527

Query: 523 NDIADVFLENR 533
             +A  +   R
Sbjct: 528 GYVAGAYYLAR 538


>gi|73541160|ref|YP_295680.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72118573|gb|AAZ60836.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 393

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 142/396 (35%), Gaps = 24/396 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q       GE  D+ +  P  AW  +    +   L  ++ +    
Sbjct: 12  GEDIEMLRSAVRDWAQAELAPRAGE-IDRTDQFPMDAWKKMGDLGV---LGITVAEEYGG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH +    +   +        + S    + +    T      + PK+ S ++  
Sbjct: 68  ANMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKAKYLPKLVSGDW-- 125

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + ++  D         W  + P  D  ++
Sbjct: 126 -----------IGALAMSEPNAGSDVVSMKLRAERKGDRYVLNGTKMWITNGPDCDVLVV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ E  +G   +   + +    G    +  +K+G R + T EL F +        L   
Sbjct: 175 YAKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPAENILGAE 234

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G  + +   +  + A++S   +  M+  +     Y   R   G  + +  +++  +AD+
Sbjct: 235 NGGAKVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA +  + +  + D     S+     R        +  + A  +  E ++ +GG+
Sbjct: 295 YTTLQAARSYLYTVGKNLDS--LGSDHVRQVRKDCAAVILYTAEKATWMAGETVQILGGN 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R +R++    I  G+     + +   L
Sbjct: 353 GYINEYPAGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|301167960|emb|CBW27546.1| acyl-CoA dehydrogenase, short-chain specific [Bacteriovorax marinus
           SJ]
          Length = 379

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 150/401 (37%), Gaps = 38/401 (9%)

Query: 61  LGEYVLSCTAQEL-ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           LG+Y      +++ ++ A+     L          DK E  P   +++++   +G   S 
Sbjct: 3   LGDY---QEIRDMVSKFADTEVAPL------AASIDKNEKIPE--SIVKQLGENGFLGSY 51

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               +        A+ I    +          + + +      +         K + PK+
Sbjct: 52  VPEEYGGAGMDYTAYSIIVEEISRACASTGVLVSAHTSLCVYPILNFGNEEQKKKYLPKL 111

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                  L+E   GTD  ++ +  +   D  Y ++G K F+++ 
Sbjct: 112 ASGEH-------------IGCFCLSEPNAGTDAGSLITFAEDKGD-YYEITGTKNFITNG 157

Query: 239 -MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             ++  ++ A+         +   + +    G    + ++K+G + ++T ++ F      
Sbjct: 158 KEANIAVVFAKTTKTDNYKGISAFIVETDTAGYEVMKCEDKLGIKGSSTAQISFDKVRVP 217

Query: 298 LLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L  +  G    M  L    +  A  ++   + +   A  Y+  R   G  L     
Sbjct: 218 KENLLGTLEKGFGIAMNTLDGGRIGIASQALGISQAAFDYAKKYSNERVQFGKPLHALQA 277

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD++  IAA+  L +  +   D  ++ S ++A A       K +  + A  +  +
Sbjct: 278 IQFMLADMSTKIAASRLLIWEASRRKDNNETYSLQSAQA-------KLFAAESAMWITTK 330

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           A++  GG+GY +E  + R +R++    I  G+     + + 
Sbjct: 331 AIQVCGGNGYTKEYPVERFFRDAKITEIYEGTSEIQRVVIA 371


>gi|194751756|ref|XP_001958191.1| GF10801 [Drosophila ananassae]
 gi|190625473|gb|EDV40997.1| GF10801 [Drosophila ananassae]
          Length = 415

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 115/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  +       P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 134 FGNDAQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGKDYVINGTKMWISNSD 193

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T  + F N     
Sbjct: 194 VAGVFLVFANAKPEDGYRGITTFIVDRDTPGLIVNKPEDKLGIRASGTCMITFDNVRVP- 252

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + ++   V LA+      I Y   R   G  + + 
Sbjct: 253 --EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGEAIYNF 310

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A    
Sbjct: 311 QSMQHQIATVATEIDAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAA 363

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 364 IKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 411


>gi|169796360|ref|YP_001714153.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156904|ref|YP_002318949.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483821|ref|YP_002326046.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|332851984|ref|ZP_08433851.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871715|ref|ZP_08440175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149287|emb|CAM87170.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056064|gb|ACJ40966.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988701|gb|ACJ59000.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|332729561|gb|EGJ60899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731283|gb|EGJ62580.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 383

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 139/373 (37%), Gaps = 31/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSV 156
           E  P     ++     GL        +E +    +     A  L   +      + + + 
Sbjct: 35  EIPPDIVEQMK---ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +S + +  T      + P++   E             V     LTE   G+D A++ +
Sbjct: 92  IGSSGLIIDGTEAQKSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKT 138

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQR 274
              K  D  Y L+G K F+++ P +  F ++A+      G   +   + D    G+   +
Sbjct: 139 SAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGK 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
              K+G +   T ++ F N        +      G    MK+L    L  A +SV     
Sbjct: 198 RDKKMGQKGAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L ++++YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E 
Sbjct: 258 MLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   K +  +M   V    ++  GG+GYI E +I R YR+     +  G+    
Sbjct: 317 ------ASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQ 370

Query: 451 VLDVLNLLEKGTN 463
            + +   + +  +
Sbjct: 371 QVIIARNMIRAAS 383


>gi|291300660|ref|YP_003511938.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569880|gb|ADD42845.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 383

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 150/405 (37%), Gaps = 38/405 (9%)

Query: 67  SCTAQELARMAN-----YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           S  A+ +  +A         P+++ +   GE        P    +LR+    G     + 
Sbjct: 9   SDEARAIVELARDIAEGELAPRVNEFEARGE-------FP--REVLRKLGAAGFLGLPYP 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +    +     ++         +     +S    +   VA   T    + W P++   
Sbjct: 60  ERYGGGGQPYEVYLQVLEELAYRWVVVAEAVSVHTLACFPVAEFGTDAQRERWLPQMVGG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE  GG+D A+++++  +  DG        +   + ++D
Sbjct: 120 -------------DTLGAYCLTEPSGGSDAASLSTKAVRDGDGFVVEGTKAFITHAGVAD 166

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
              + A+  G  G   V  L+      G+  QRL++K+G  ++ T ++ F         L
Sbjct: 167 FHSVFART-GGPGARGVSCLVLPEGTPGVVPQRLEHKMGLSASPTAQIVFDGARVGSDCL 225

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L  A  +V   + +   A  YAR R   G  +ID   +   
Sbjct: 226 VGEEGRGFSIAMAALNAGRLGIAACAVGLAQAACDYATQYARGRRQFGSPVIDFQGVGFM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I+AA AL    A   D  +     AA A       K +   +A  V  +A++ 
Sbjct: 286 LADMATQISAARALVSHAARLRDAGRGFRVAAAQA-------KLFATDVAMRVTTDAVQV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GG GY+ +  + R++RE+    I+ G+     L +   L +G  
Sbjct: 339 LGGYGYVSDHPVERYFREAKVLQIVEGTNQIQRLVISRALAQGGG 383


>gi|296214195|ref|XP_002753594.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 423

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 126/375 (33%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+           ++  + G+        +         H +    +   +   
Sbjct: 63  PKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 122

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S EY                L ++E   
Sbjct: 123 GLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMSEPNA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   + + 
Sbjct: 170 GSDVVSMKLKAEKKGDHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEK 229

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +       +LG  N     +     L  L  A 
Sbjct: 230 GMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERLVLAG 289

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A + DE
Sbjct: 290 GPLGLMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDE 349

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +++             +  + A  V  + ++C GG+GYI +  + R  R++    I
Sbjct: 350 GHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI 402

Query: 443 LLGSGNAMVLDVLNL 457
             G+     L +   
Sbjct: 403 GAGTSEVRRLVIGRA 417


>gi|302344677|ref|YP_003809206.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641290|gb|ADK86612.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 389

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 154/405 (38%), Gaps = 30/405 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + +L  TA+  A  AN   P         E+ D+ +  P    L + +   GL     D 
Sbjct: 9   QIMLRETARRWA--ANELAPI-------AEQVDEEDEMPL--RLFQSAGAVGLMGIAIDP 57

Query: 123 SFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +         ++ AA  +  ++      L + S   A  +      +    + P + + 
Sbjct: 58  EYGGSGLDVLSEVIAAEEISAISPGMGLSLGASSNLCAGNIQRNGNAQQKARYLPDLVAG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                             LGLTE   G+D  +I ++  +  D         +  + P++D
Sbjct: 118 -------------KTIGALGLTEPNAGSDAMSIATRATRQGDHYVLNGSKMFITNGPIAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+ +   G F +   + +    G    R   K G+R + T EL F N       L
Sbjct: 165 VVLVYAKTDPAAGPFGISAFIVETKWPGFSVSRKLKKAGHRGSPTGELRFDNLEAPAENL 224

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+ N     V     +  +  A   V   R ++  ++ YA+ R   G  +    +++  
Sbjct: 225 VGEENGGIAVVMRGLDIERVVCAAGCVGICRQAIDLSLKYAKEREQFGRPIAKFQMIQAK 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++     AA  +++  A   ++++   +       MA     +  + A  V +EA++ 
Sbjct: 285 LAEMYALYEAAKNMTYAAAVMAEQSQRGGK-GTELTRMAAAAVMFSAEAATKVASEAVQI 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGT 462
            GG GY  E ++ R +R++    I  G+     L +   LL++G 
Sbjct: 344 HGGYGYCLEYAVQRLWRDAKLFEIGAGTTEIRKLIIARELLQRGR 388


>gi|295687527|ref|YP_003591220.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429430|gb|ADG08602.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 597

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/513 (18%), Positives = 182/513 (35%), Gaps = 67/513 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P          D L +    + P       +     V+       A+        L+   
Sbjct: 5   PPVRDHAFILRDVLNIDQHGDLPGFSDAPFD-----VVEQILDAAAQFTGEVLAPLNTVG 59

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G + D     V   P +    ++    G      D ++        + +  A   + 
Sbjct: 60  DKHGCQLDPATNTVTTPPGFKDAYKQLCEGGWTAIGSDPAYGGQGLP--YVVNLAFSEMS 117

Query: 144 AQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +       M P +   +   +    T    + + PK+ + E+  T             + 
Sbjct: 118 SSANMAFSMYPGLAHGAYSAIHFGGTDEQKETYLPKMVTGEWTGT-------------MN 164

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   GTD+  + ++     DG Y ++G K ++S+   D       ++LA++EG     
Sbjct: 165 LTEPHCGTDLGLLRTKAVPQGDGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGV 224

Query: 252 -RVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             +  F+VP+              G+    L+ K+G   NAT  +++ +  G+L+G+ N 
Sbjct: 225 KGISLFIVPKFFPKADGSVGERNQGVKCVGLEEKMGIHGNATCVMQYDDAVGYLIGEENA 284

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILID 351
               +  M     L   +  V+    +   A+ +A+ R   G               +I 
Sbjct: 285 GLKIMFVMMNEARLGVGLQGVAQGEAAYQAAVAFAKDRLQ-GRSLTGPKNADGPADPIIV 343

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R + D    +    A  F  A   D      + K R + A Y  +M P+ K +  
Sbjct: 344 HPDVRRMLMDSKAILEGGRAFLFWTALHGDLSHIHPDEKVREKSADYMSLMTPVLKGYLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
                + + A++  GGSG+ E   +++  R+     I  G+     LD++   L  KG  
Sbjct: 404 DKGFQICSNAVQVHGGSGFTEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGR 463

Query: 464 LFEQLFSTLEQDLG-SSGKKVITILRDSISLCK 495
                F  ++Q +G +   + I    ++++  K
Sbjct: 464 AVMTFFQEVDQFIGENDADEAIKPFIEALAGVK 496


>gi|76801448|ref|YP_326456.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160]
 gi|76557313|emb|CAI48889.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160]
          Length = 381

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 133/375 (35%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  +  DK +  P    L+      GL    +   +        A+      +   +   
Sbjct: 26  PVADELDKNDEFP--WDLVDELAELGLMGMPFPEEYGGAGLDYHAYPAALEEIARGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + +    + +MV         +++               P+ +        L+E   
Sbjct: 84  GTIVAAHISLAGNMVYKFGNDEQKEEYL-------------TPLAQGEEIGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ A+ +  +K  D         W  +  ++D   + A+ +   G   +   +     
Sbjct: 131 GSDVPAMGTTAEKDGDEYVINGDKLWISNGSVADTVTVFAKTDPEAGNKGISSFIVRPDT 190

Query: 268 N-GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
           + G   +  ++K+G++   T EL F +       LLGD                +  A  
Sbjct: 191 DDGFYVEGTEDKLGDKGCPTAELRFDDLRIPESRLLGDEGRGFVQALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L EA  YA+ R      + D   ++  +AD+     AA  L    A+     
Sbjct: 251 SVGIAQAALDEAADYAQDREQFDQPISDFQAIQHKLADMDTKTRAARLLMHDAADKKIRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +S ++EAA A       K +  +++  V  E ++  GG GY ++    R YR++  N I 
Sbjct: 311 ESFAKEAAQA-------KLYASEVSREVANEGIQIHGGYGYTKDFPAERFYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   +   +   L
Sbjct: 364 EGTSEVLRNTIAAQL 378


>gi|86137609|ref|ZP_01056186.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85825944|gb|EAQ46142.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 386

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 144/398 (36%), Gaps = 33/398 (8%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +L    N     +H +      P  +  D+  EF P    L       GL        F 
Sbjct: 9   DLGDEVNALRDMVHRWAQDRVKPMAQEIDQKNEFPP---ELWTEMGELGLLGITVPEEFG 65

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH +    +   +   +    + S    + + L  T    K + P + S ++ 
Sbjct: 66  GAGMSYLAHTVAVEEVARASASVSLSYGAHSNLCVNQIKLNATDEQKKKYLPGLVSGQH- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ +++ + +K +D         W  + P +D  +
Sbjct: 125 ------------VGALAMSEAGAGSDVVSMSLRAEKRNDHYRLNGNKYWITNGPDADTLV 172

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+ +   G   +   + +    G       +K+G R + T EL F +       +LG+
Sbjct: 173 VYAKTDPDAGSKGITAFIIEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLGE 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +        +  A +    M   + E + Y + R   G  + +  +M+  IAD
Sbjct: 233 EGKGVKVLMSGLDYERVVLAGIGTGIMAACMDEMMPYLKERKQFGQPIGNFQLMQGKIAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + +A A  + +A + D+     ++AA           +  + A     +A++ +GG
Sbjct: 293 MYTAMNSARAYIYEVAKACDKGTVTRQDAA-------ACCLYASEQAMVQAHQAVQALGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 346 AGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|300309596|ref|YP_003773688.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300072381|gb|ADJ61780.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 596

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 89/503 (17%), Positives = 180/503 (35%), Gaps = 74/503 (14%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK----VE 98
             +    P             ++    +E  + A+     L+      G  +D+    V 
Sbjct: 22  EEVFKELPPHADTN-----RELVDQVLEEGGKFASQVLFPLNHSGDREGCHYDRESKTVT 76

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +    ++ +  G      D  F          I  +   ++        M P ++ 
Sbjct: 77  TPKGFKQAYQQYVEAGWAALSCDPEFGGQGLPL--TINNSFYEMLNSSNQAWTMYPGLSH 134

Query: 159 ASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   L    +    + + PK+ S E+  T             + LTE   GTD+  + S
Sbjct: 135 GAYECLHAHGSEEQKQLYLPKLVSGEWTGT-------------MCLTEAHCGTDLGLLRS 181

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED- 264
           + +  +DG Y ++G+K F+S+  +D       ++LA++         +  FLVP+ L + 
Sbjct: 182 KAEPQADGSYKITGNKIFISAGENDVSANIIHLVLARLPDAPEGSKGISLFLVPKFLPNA 241

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G+ N +    ++ K+G   NAT ++      G+L+G  +     +        L  
Sbjct: 242 DGSLGARNPIFCGAIEEKMGIHGNATCQMNLDGATGWLIGQPHKGLQAMFVFMNAARLGV 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +    V+   A+ YA+ R                  +I  P ++R +         
Sbjct: 302 GMQGLGLTEVAYQNALVYAKDRLQMRSLSGIKAADKPADPIIVHPDVRRMLLTAKAFAEG 361

Query: 369 ATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             A +  +A   D+  +  +E      A    ++ P+ K +    A    +E ++  GG 
Sbjct: 362 GRAFTSYVALELDKELTHPDEQVRKDSADIVALLTPVVKAFLTDNAWMATSECLQVYGGH 421

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GYI E  + ++ R++  N I  G+     LD+L                +  D G+  KK
Sbjct: 422 GYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLG-------------RKILMDNGAKLKK 468

Query: 483 VITILRDSISLCKEDKGLARFLT 505
               ++  +     D+ ++ F+T
Sbjct: 469 FGAQIQAFVEEHGTDESMSEFIT 491


>gi|332850707|ref|ZP_08432954.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332866992|ref|ZP_08437309.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332730544|gb|EGJ61860.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332734321|gb|EGJ65449.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
          Length = 378

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 127/372 (34%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK     A   L       G         +          + A           
Sbjct: 24  PTAAHRDKTHEFRA-QELKDLGA-LGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGAI 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S   +    + L   + +  + + PK  S E+                  LTE   
Sbjct: 82  STIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEW-------------LGCFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +AI  + ++  D        ++  S   +   ++ A  + + G   +   L   + 
Sbjct: 129 GSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T  +   +    L   +     G    +  L    +  A  S
Sbjct: 189 QGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A+ YA  R   G  L+    +   +AD+A  I AA  L    A   D   
Sbjct: 249 VGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +   MA  V ++A++  GG GY+ +  + R YR+   + I  
Sbjct: 309 PCLKEASMA-------KLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   L +  
Sbjct: 362 GASDIQRLVIAR 373


>gi|107025761|ref|YP_623272.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116693057|ref|YP_838590.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105895135|gb|ABF78299.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116651057|gb|ABK11697.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 377

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 79/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EMLAPNAAQWDHDAHLPD--AIVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
            A M    V     LTE   G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 112 -ADMAAGRVIGAFCLTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|257457881|ref|ZP_05623040.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
 gi|257444594|gb|EEV19678.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii
           ATCC 35580]
          Length = 390

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 147/374 (39%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLM 152
           D+     AW    +++    G     + + +        ++ I    L  +         
Sbjct: 32  DRGPVEDAWMEDQVKQMGAHGWLGIPYSKEYGGAGLDVISYAIVVEELSRVDGGIGVICS 91

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +   A  +A   T    + +               P+ K       GLTE   G+D  
Sbjct: 92  AHTSLGAYPIAEFGTEAQKQKYL-------------VPLAKGEKIGAFGLTEPNAGSDAG 138

Query: 213 AITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +  + I DG  Y L+G K F+++ P +D +++ A      G   +   + +    G 
Sbjct: 139 GTET--EYIDDGSNYILNGSKIFITNAPKADTYVIFAANPDVPGTKGISAFIVEKGDAGF 196

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMR 329
            +    +K+G R++AT EL F+           +     E  KI +  LD   + ++   
Sbjct: 197 EFGEHYDKLGIRTSATSELIFNEVTIPHD---RLLGKEGEGFKIAMKTLDGGRIGIASQA 253

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + +A     EA+ YAR R   G  +  Q  +   +AD+   I AA  L ++ A   +  +
Sbjct: 254 LGIAQGAYEEAVKYARTREQFGKPIGAQQNLAFKLADMLTKIEAARLLIYKAAEKKENHE 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               ++A A++       +   +A  V+ +A++  GGSG+I+   + + YR++   +I  
Sbjct: 314 DYGLDSAMAKM-------YASDIALEVVNDALQIHGGSGFIKGIPVEKMYRDAKITTIYE 366

Query: 445 GSGNAMVLDVLNLL 458
           G+     L + + +
Sbjct: 367 GTNEIQRLVIASKI 380


>gi|108798271|ref|YP_638468.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867367|ref|YP_937319.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126433938|ref|YP_001069629.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108768690|gb|ABG07412.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693456|gb|ABL90529.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126233738|gb|ABN97138.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 388

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 124/378 (32%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PYAADVDEQMRFP--QEALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + +   P +   +                   L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSEELKQKVLPDLVEGQ--------------LASYALSEREAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 140 SDAASMRTRAKADGDDWILNGAKAWITNGGKSSWYTVMAVTDPDKGANGISAFMVHIDDE 199

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 200 GFTVGPKERKLGIKGSPTTELYFENCR---IPGDRIVGEPGTGFKTALATLDHTRPTIGA 256

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + AA  + +  A   + 
Sbjct: 257 QAVGIAQGAVDAAIAYTKDRKQFGTSISDFQGVQFMLADMAMKVEAARLMVYSAAARAER 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 317 GEGN------LGFISAASKCFASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 370

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 371 YEGTNQIQRVVMSRALLR 388


>gi|56421929|ref|YP_149247.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261420799|ref|YP_003254481.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319768469|ref|YP_004133970.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56381771|dbj|BAD77679.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261377256|gb|ACX79999.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317113335|gb|ADU95827.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 377

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 145/379 (38%), Gaps = 36/379 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  ER ++ EF      +L +    GL        +        ++ I    +  ++   
Sbjct: 26  PFVERMEQGEFP---RPILAKMAELGLMGITVPEQYGGAGMDFVSYIIAIHEISKVSPTV 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    T    + +  K+   EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A+      G   +   + + 
Sbjct: 130 GSDAKSLKTKAVRRGD-RYVLNGSKIFITNGGEADTYIVFARTNPEEAGSRGISAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G+   + + K+G   + TV + F +         N+     E  KI +  LD   + 
Sbjct: 189 GTPGMSIGKDEKKMGLHGSRTVTITFEDAEVPA---ENLLGQEGEGFKIAMANLDVGRIG 245

Query: 325 VSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +AEA       YA+ R   G  +I+Q  +   +AD+A    AA  L +R A  
Sbjct: 246 IAAQALGIAEAAVEHAVAYAKERVQFGKPIIEQQGVAFKLADMATAAEAAKWLVYRAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     +EA+ A       K +  + A     EA++  GG+GY ++  + R +R++  
Sbjct: 306 RAQGLPCGKEASMA-------KLFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 359 TQIYEGTSEIQRIVISKHL 377


>gi|121606366|ref|YP_983695.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595335|gb|ABM38774.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 598

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/528 (18%), Positives = 183/528 (34%), Gaps = 77/528 (14%)

Query: 29  PLFIGMNAYSSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           P    M  +    +L     +   P     +        ++   +E  + A   T  L+ 
Sbjct: 6   PPLRDM-QFVLHEVLKVTDELRGLPPHADID-----ADTINAVLEEGGKFAVEVTFPLNI 59

Query: 87  Y-GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
                G   D    +V     +     + +  G      D  +          +      
Sbjct: 60  SGDEEGCTLDKTTHEVTPPKGFKQAYAQFVEGGWAALSCDPEYGGQGLP--FVVNQCFYE 117

Query: 142 LMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +M        M P ++  +  AL    T    K + PK+ S E+  T             
Sbjct: 118 MMNSANQAWTMYPGLSHGAYEALHAHGTDAQKKLYLPKLVSGEWTGT------------- 164

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251
           + LTE   GTD+  + ++ +  +DG + L+G+K F+S+   D       ++LA++     
Sbjct: 165 MCLTEPHCGTDLGMLRTKAEPQADGTFKLTGNKIFISAGEHDMTSNILHLVLARLPDAPQ 224

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+   +     GS NG+    L++K+G   NAT ++   +  G ++G  N
Sbjct: 225 GSKGISLFIVPKFNVNEDGSIGSRNGIYCGGLEHKMGIHGNATAQIVLEDAVGTMVGAPN 284

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  M     L     S+    V+   A+ YA+ R                  +I 
Sbjct: 285 KGLAAMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIV 344

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P +++ +           AL+       D      + K R +      ++ PI K +  
Sbjct: 345 HPDVRKMLLTAKAYAEGGRALAIYCTLLLDKELYHPDEKVRKDSGEIVALLTPIVKAFLT 404

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                     M+  GG GY++E  + +  R++  N I  G+     LD+L     G N  
Sbjct: 405 DNGHIATNACMQVFGGHGYVKEWGMEQLVRDNRINMIYEGTNTIQSLDLLGRKILGNN-- 462

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
                      G++ KK   ++   I+    ++ +A F+     LA  
Sbjct: 463 -----------GATLKKFGKLIGALIAEEGVNEKMAEFINPLAYLADQ 499


>gi|92116392|ref|YP_576121.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91799286|gb|ABE61661.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 594

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/538 (20%), Positives = 208/538 (38%), Gaps = 77/538 (14%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSI 119
             + +   +E  R A    TP        G R    +V   P W A  RR    G +   
Sbjct: 34  ADITAAVLEEAGRFATEVLTPLDRTGDQHGARLQDGRVTTAPGWAAAYRRWTAAGWNAVS 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               F       A  I AA   + +       + P +T +++ AL    +  + K +  K
Sbjct: 94  GPEDFGGQGLPLA--INAACTEIWSASNIAFGLCPLLTLSAIEALTAHGSDALKKIYLEK 151

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+ ++ S+ ++ +DG Y + G K F++ 
Sbjct: 152 LVSGEWSGT-------------MQLTEPQAGSDVGSLRSRAERAADGSYRIVGTKIFITY 198

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D        +LA++            FL+ + L +     G+ N +    +++K+G 
Sbjct: 199 GDHDMTDNIVHFVLARLPDAPAGTKGTSLFLISKFLVNADGSLGARNDIHASGIEHKLGI 258

Query: 282 RSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T  +   +     G+L+G+ N     +  M     L   +  V     +   A+ Y
Sbjct: 259 HASPTCTMTMGDEGGAVGYLIGEENRGMQCMFTMMNQARLGVGLEGVGVAERAYQRALAY 318

Query: 339 ARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388
           A+ R               +I  P +KR +  +    AAA  + +  A + D A   ++ 
Sbjct: 319 AQERKQGRAVGKSGDGMDAIIVHPDVKRMLMQMRALTAAARTICYATAVALDVAARATDP 378

Query: 389 -----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 AA   ++ P+ K +   +   V +  ++  GG G+IEE   A+HYR++   SI 
Sbjct: 379 DVRAAAAARGALLTPVAKAFSTDIGNEVASLGVQVHGGMGFIEETGAAQHYRDARITSIY 438

Query: 444 LGSGNAMVLDVLNLLEKGT------NLFEQLFSTLEQDLGSSGKKVIT---ILRDSISLC 494
            G+     +D++     G        L ++L +T+++   S+          LRD++   
Sbjct: 439 EGTNGIQSIDLVTRKLGGDGGAAVWALLDELSATVKRVEASNDPAFGATGTKLRDALGSL 498

Query: 495 KEDKGLARFLTEKI------ALASSAAALYRAGMN----DIADVFLENR-FLDNCHST 541
           +     +++L E++      ALA +   L   G       +A+  L  R   D    +
Sbjct: 499 ERA---SKWLLERLVSSPNDALAGATPYLRLFGSTLGGCKLAEEALAARDLGDEFGDS 553


>gi|120556345|ref|YP_960696.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326194|gb|ABM20509.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 379

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 77/371 (20%), Positives = 139/371 (37%), Gaps = 24/371 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    + + +   GL    +  +   +         A    LM     G +
Sbjct: 29  DDWEEAGEFP--REIYKLAGDAGLLGIGFPETLGGICEGDIFMKVAVSEELMRSTSGGFV 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S       +  +         WA K    +       P+ +      L +TE  GG+D+
Sbjct: 87  ASIGSLDIGLPPV-------AKWAKK----DIREQIVPPVLRGDKIAALAVTEPGGGSDV 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + ++  K  D  Y ++G K F++S +      +A   G  G   +  LL D    G  
Sbjct: 136 ANLKTRAVKDGDH-YIVNGSKTFITSGIRADHYTVAVRTGGEGHGGISLLLIDKGTPGFT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                 K+G  ++ T EL F +       L+G  N     +    +   L  +IM+    
Sbjct: 195 TGNKLRKMGWWASDTAELFFEDCRVPADRLIGAENAGFIAIMSNFLAERLSLSIMAYMTA 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +++   A+ Y R+R   G  +    V +  + D+A  I  A   ++R A      K+  +
Sbjct: 255 QIAYEAALDYTRQRQAFGRPVAGFQVTRHKLVDMATQIDIAREYTYRCAALMQAGKNPIK 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + A A       K +   +   V  EA++  GG GY+ E  + R YR++   SI  G+  
Sbjct: 315 QVAMA-------KNFSVDVCEKVTREAVQLFGGIGYMRESVVERLYRDAKILSIGGGTTE 367

Query: 449 AMVLDVLNLLE 459
            M   +   + 
Sbjct: 368 IMKELIAKQIR 378


>gi|259419059|ref|ZP_05742976.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member
           8) [Silicibacter sp. TrichCH4B]
 gi|259345281|gb|EEW57135.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member
           8) [Silicibacter sp. TrichCH4B]
          Length = 381

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 139/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+     P    L  +    G                +           MA    
Sbjct: 26  PFARQWESEGTIP--KDLWPKVGELGFGSLYVSEETGGSGLSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+ +  +  +     P + S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDMFASEELKARVMPDVMS-------------LNTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  + ++G Y L+G K F+S    SDA++ + +  G  G   +  +  +   
Sbjct: 131 SDAASLKTRAARDNEG-YVLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGISTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G +S  T +++F +     G L+G+                L+ A  S
Sbjct: 189 PGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGEEGHGFKYAMKGLDGGRLNIAACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L+  + Y   R   G  +     ++  +AD+ +++ AA     + A   D+ +
Sbjct: 249 LGAAQAGLSATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQAAWKLDQGE 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ASKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   +
Sbjct: 363 GTNEIMRVIVARHM 376


>gi|297531594|ref|YP_003672869.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297254846|gb|ADI28292.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 377

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 145/379 (38%), Gaps = 36/379 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  ER ++ EF      +L +    GL        +        ++ I    +  ++   
Sbjct: 26  PFVERMEQGEFP---RPILAKMAELGLMGITVPEQYGGAGMDFVSYIIAIHEISKVSPTV 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +    + +    T    + +  K+   EY                  LTE   
Sbjct: 83  GVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEY-------------LGAFCLTEPSA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D  ++ ++  +  D  Y L+G K F+++   +D +I+ A+      G   +   + + 
Sbjct: 130 GSDAKSLKTKAVRRGD-RYVLNGSKIFITNGGEADTYIVFARTNPEEAGSRGISAFIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              G+   + + K+G   + TV + F +         N+     E  KI +  LD   + 
Sbjct: 189 GTPGMSIGKDEKKMGLHGSRTVTITFEDAEVPA---ENLLGQEGEGFKIAMANLDVGRIG 245

Query: 325 VSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +AEA       YA+ R   G  +I+Q  +   +AD+A    AA  L +R A  
Sbjct: 246 IAAQALGIAEAAVEHAVAYAKERVQFGKPIIEQQGVAFKLADMATAAEAAKWLVYRAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     +EA+ A       K +  + A     EA++  GG+GY ++  + R +R++  
Sbjct: 306 RAQGLPCGKEASMA-------KLFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKI 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 359 TQIYEGTSEIQRIVISKHL 377


>gi|297569259|ref|YP_003690603.1| acyl-CoA dehydrogenase domain protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925174|gb|ADH85984.1| acyl-CoA dehydrogenase domain protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 383

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 131/372 (35%), Gaps = 24/372 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E +P    +L       L+       +            A               + 
Sbjct: 32  DETEEYP--REILNALAQADLYGLYIPEEYGGFGGGAFEMALALEQVARGCTGVATAFAA 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S   A  + +  +  + + + P I                       LTE   G+D + I
Sbjct: 90  SGLGAYPILVSGSEELKQKYLPDI-------------AAGKRFAAFALTESGAGSDASGI 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +   K  D        +W  ++  +  + ++A  + + G       + + +  G     
Sbjct: 137 QTTAVKDGDHWVLNGTKQWITNAGEAGIYTVIAITDRKRGARGATMFVVEDTDPGFSVGP 196

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVS 331
            + K+G R ++T E+   +        +     G +  MK   L     A + V   + +
Sbjct: 197 KEKKMGIRCSSTREVILKDCRIPADRVIGRPGLGFITVMKTLDLSRPGIATLGVGLGQAA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA+ YA++R      +I    +   +AD+A+ + AA AL +  A   D    ++ +A+
Sbjct: 257 LDEAVRYAKQRIQFDKPIISFQAVSHMLADMAIQVEAARALVYAAARHVDAHPDKASKAS 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K +   MA  V  +A++ +GG G++ E  + +  R++    I  G+     
Sbjct: 317 ------SVCKTFATDMAMKVTVDAVQVLGGYGFMREYPVEKMMRDAKILQIYEGTNQIQR 370

Query: 452 LDVLNLLEKGTN 463
             +   L K  N
Sbjct: 371 NVIGQELNKEYN 382


>gi|296391144|ref|ZP_06880619.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 287

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 118/305 (38%), Gaps = 25/305 (8%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A  +    +  + + + PK+ S E                 + +TE   G+D+  + + 
Sbjct: 4   AAPYILHYGSEALKRKYLPKLVSGEM-------------VAAIAMTEPGAGSDLQGVKTT 50

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                D  Y ++G K F+++  ++D  I++A+ + + G   +   + +    G    +  
Sbjct: 51  AVLDGDE-YVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAGTPGFSKGKRL 109

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLA 333
            K+G ++  T EL F +        L     G +  M+ L    L   I +++    +L 
Sbjct: 110 EKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIGALASAEAALQ 169

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y R R   G  + D    +  +A++A +I        R      + K         
Sbjct: 170 WTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMELHLQGK-------LD 222

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + KYW   +   V+ E ++  GG G++ E  +AR + ++    I  G+   M   
Sbjct: 223 VPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIYAGTNEIMKEI 282

Query: 454 VLNLL 458
           +   L
Sbjct: 283 IARAL 287


>gi|329890061|ref|ZP_08268404.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328845362|gb|EGF94926.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 379

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 137/403 (33%), Gaps = 29/403 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   + +   A      +L  +     RWD+ +  P    +L+ +   G       
Sbjct: 2   DFALTDDQRAIQDAARAFAEAELAPHSA---RWDEDKHFPV--DVLKAAAEMGFAGIYTG 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +              +     +S    +  M+    +  +   + P +   
Sbjct: 57  EEHGGMGLGRVEAAVIFEELSRGDVATAAFISIHNMATWMIDSFGSAELRARFVPSLVGM 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D AA+ +   +  D         +   +  SD
Sbjct: 117 E-------------KIASYCLTEPGSGSDAAALRTTAVRDGDHYVLNGAKAFISGAGTSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++ +  G  G   +  ++ +    GL +   + K+G  +  T  + F +       L
Sbjct: 164 VYVVMVRTGGE-GPKGISTIVVEAGTPGLSFGANEKKMGWNAQPTAVVSFDDCRVPVANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  S+ G R++L  A  Y   R   G  +      +  
Sbjct: 223 VGEEGAGFKYAMAGLDGGRLNIAACSLGGARLALETAQEYVAGRKQFGQAIGQFQNTQFE 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A D+ AA  +  R A + D                 + K         +  +A++ 
Sbjct: 283 LADMATDLEAARLMVLRGAWAIDTGHPEK------TKWCAMAKRLTTDACFQIADQALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG GY+++  + R  R+   + IL G+   M + V   L +G
Sbjct: 337 HGGYGYLKDYPLERIVRDLRVHRILEGTNEIMRVIVARELARG 379


>gi|330812184|ref|YP_004356646.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380292|gb|AEA71642.1| putative dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 592

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/597 (16%), Positives = 202/597 (33%), Gaps = 94/597 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+         +    L   L A   +V  + +E + E     T++ +A ++  
Sbjct: 10  DMRFVLNEV--------FEVAKLWAQLPALADTVDAETVEAILEEAGKVTSKSIAPLSRA 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              +   +  G      V     +    +     G      D  +  +   +A   +   
Sbjct: 62  ADEEGCHWAAGA-----VTTPAGFPQAYKTYAEGGWVGVGGDPVYGGMGMPKAVSAQVEE 116

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +   A L  G     +  +   +    +  +   + P +++  +             A  
Sbjct: 117 MVNSASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVW-------------AGS 163

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++     
Sbjct: 164 MCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPA 223

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ + +     G+ N      +++K+G +++AT  + F    G+L+G+ N
Sbjct: 224 GPKGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  M     L   I  ++    S   AI YAR R  S               +I 
Sbjct: 284 KGLAAMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIV 343

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCC 405
            P ++R +  +        A S  +A   D AK      +R        ++ P+ K +  
Sbjct: 344 HPDVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPVTRKRAEDLVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            +         +  GG GYI E    +  R+     I  G+     LD++   ++  G  
Sbjct: 404 DLGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGA 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI-----------ALAS 512
            ++     +     ++   +   ++   S       L  +L ++                
Sbjct: 464 FYKLFADEIRHFTATANSDLAEFIKPLNSAVDTLDELTDWLLDRAKSNPNEIGAASVEYL 523

Query: 513 SA----------AALYRAGMN-DIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            A          A + RA +  +  D F  ++              RF  A ++  +
Sbjct: 524 QAFGYTAYAYMWALMARAALGKESQDDFYASKLG----------TARFYFARLLPRI 570


>gi|260459689|ref|ZP_05807943.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034491|gb|EEW35748.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 388

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 144/397 (36%), Gaps = 36/397 (9%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+AR   A+   P           WD+ +  PA   ++R +   GL          
Sbjct: 19  RAIQEMARAFAADRVAP-------NALDWDRKKHFPA--DVIRETGPLGLGGIYIRDDVG 69

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +   +        A       +S     ASM+         + + PK+ S E+  
Sbjct: 70  GSALGRLDAVLIFEALSHADPAFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEW-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
                           LTE   G+D AA+ ++  K   G Y L+G K F+S    SD + 
Sbjct: 128 -----------LASYCLTEPGSGSDAAALKTRAVKSG-GDYILNGTKQFISGAGDSDVYA 175

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---D 301
           ++ +  G  G   +  ++      GL +   ++K+G    +T ++ F +           
Sbjct: 176 VMVRT-GADGPKGISTIIVPRDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSG 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G          L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD
Sbjct: 235 EGAGFGIAMAGLDGGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ AA    +  A+  D           A   + + K +       V  +A++ +GG
Sbjct: 295 METELQAARIFLYAAASKLDRKAPD------AGKWSAMAKRFVTDTGFNVANDALQLLGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  I +  R+   + IL G+   M + +   L
Sbjct: 349 YGYLHDYGIEKLVRDLRVHQILEGTNEIMRVIIARAL 385


>gi|91977574|ref|YP_570233.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684030|gb|ABE40332.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 375

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 126/349 (36%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK 172
           G    +   ++            A             ++S   +   M  L   T    +
Sbjct: 47  GFLGMLVPEAYGGSDTGMVAYTLALEEIAAGDGACSTIVSVHSSVGCMPILKFGTEEQKQ 106

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+               G  LTE + G+D + + +  ++  D        +
Sbjct: 107 RFLPKLASGEW-------------IGGFALTEPQAGSDASNLRTTARRDGDHYVINGAKQ 153

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  S       I+ A  +   G   +   +      G    R+++K+G  S+ T +L F+
Sbjct: 154 FITSGKNGQLIIVFAVTDPAAGKKGITAFIVPTDTPGFEVVRVEHKLGQHSSDTCQLAFN 213

Query: 293 NTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +        LG                 +  A  +V   R +   A  YAR R   G  +
Sbjct: 214 DMRLPADLRLGAEGEGLKIALSNLEGGRIGIASQAVGMARAAFEVARDYARERITFGKPI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+   +   +AD+A  IAAA  +    A+  +       EA+ A+++A        + A 
Sbjct: 274 IEHQAVAFRLADMATRIAAARQMVLHAASLREAGLPCLTEASMAKLLA-------SEAAE 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           AV + A++ +GG GY+ +  + R YR+     I  G+ +   + +   L
Sbjct: 327 AVCSAAIQTLGGYGYLNDFPLERIYRDVRVCQIYEGTSDVQRIVIARNL 375


>gi|254429573|ref|ZP_05043280.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195742|gb|EDX90701.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 380

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 143/371 (38%), Gaps = 27/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    L + +   G+        F         KI A    +         
Sbjct: 31  DDWEEAGEFP--RELYKTAADAGILGINAPEEFGGTGEDVFMKIAACEELVRCSSGGLCA 88

Query: 152 MSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              S+           +  + +   P++                     L +TE  GG+D
Sbjct: 89  SLGSLDIGLPPVWKWGSDAMKQRVIPEVI-------------NGDKISALAITEPNGGSD 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +A + ++  +  D  Y ++G K F++S +   +  +A   G  G   +  LL +    G 
Sbjct: 136 VANLQTRAVRDGDH-YVVNGAKTFITSGVRADYYTVAVRTGDKGYGGISLLLIEKGTPGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   K+G  ++ T EL F +       L+G  N     +     +  L  A+ + S 
Sbjct: 195 TVGRKLKKMGWWASDTAELFFEDCRVPVENLIGPENGGFYCIMSNFQMERLILAVTANST 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +++L EA+ Y + R   G  L    V +  +A++A D+ A+T  ++R+A      ++  
Sbjct: 255 AQLALDEAMKYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTYRVAAQIAAGENCV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            + + A+ +A        + A  V  +A++  GGSGY+    + R +R++   SI  G+ 
Sbjct: 315 LDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLFRDNRILSIGGGTH 367

Query: 448 NAMVLDVLNLL 458
             M   +   L
Sbjct: 368 EIMNEVIAKQL 378


>gi|55377709|ref|YP_135559.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230434|gb|AAV45853.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 375

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 133/392 (33%), Gaps = 27/392 (6%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           AQ   R             P     D+ +  P             +        +     
Sbjct: 6   AQRAIRDTVREFAV-EDIRPKAADADREQSFPE--ECWDGLADIDITGLTTPAEYGGFDA 62

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            +              L     +S    + S +A   +  V  DW P++           
Sbjct: 63  DKPTYALVNEELAYGSLAVATALSVHCLATSCIAQFGSKAVQDDWLPEMVDG-------- 114

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                       L+E + G++   +++  ++  D        +W  +   S   I+ A+ 
Sbjct: 115 -----RPVGAFALSEPQAGSNPREMSTTARRDGDEYVINGEKQWITNGKRSGVVIVFAKA 169

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGP 308
           +       + + L      GL     ++K+G R++ T  L+F          L     G 
Sbjct: 170 DPDDPDS-ITQFLVPKDTEGLTVGEKEDKLGLRASDTTPLQFDGVRVPERYQLTEEGKGL 228

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              + IL    +  A  +V   + +L EA+ YA+ R      + +   ++  +AD+A ++
Sbjct: 229 AAALSILTTGRVAIAAQAVGLAQSALDEALDYAKEREQFDQPISEFQTIQHKLADMATNV 288

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L++  A   +  +        AR  A + KY+  + A  V  EA++  GG GY  
Sbjct: 289 QAARLLTWNAAQQLERGED-------ARAAASMAKYFASETAVEVANEAIQIHGGYGYTT 341

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR++   +I  G+       +   L
Sbjct: 342 DYPVERFYRDAKVTTIYEGTSEIQQNIIAQDL 373


>gi|167524148|ref|XP_001746410.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775172|gb|EDQ88797.1| predicted protein [Monosiga brevicollis MX1]
          Length = 417

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 133/380 (35%), Gaps = 31/380 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARL 140
           P           WD++   P W  L       GL        +    +    H +    L
Sbjct: 59  PYADQIDRD-NGWDQLR--PFWQKL----GDMGLLGVTAPAEYGGSELGYTEHVLAMEEL 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              +   A    + S    + +           + PK+ S E+                L
Sbjct: 112 SRASGAIALSYGAHSNLCVNQIVRNGNAEQKAKYLPKLISGEH-------------IGAL 158

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            ++E   G+D+ ++  + +   D         W  + P +D  ++ A+ +       +  
Sbjct: 159 AMSEPGSGSDVVSMRLKAEDKGDHYVLNGNKFWITNGPDADVLVVYAKTDMAAHQRGITA 218

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
            L +    G    +  +K+G R + T EL F N       +LG++N     +     L  
Sbjct: 219 FLIERDFEGFSSAQKLDKLGMRGSNTCELVFENCKVPKENVLGEVNKGVYVLMSGLDLER 278

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  +   +  M+ ++   + Y   R   G  + +  +M+  +AD+   + A  A  + +A
Sbjct: 279 LVLSGGPLGLMQAAMDITLDYVHTREQFGQRIGEFQLMQGKLADMYTRLTANRAYVYSVA 338

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ ++  ++             +  + A  V  +A++C+GG+GYI +    R  R++
Sbjct: 339 KKCDQGRADPKD-------CAGVILYSAEAATQVALDAIQCLGGNGYINDYPTGRILRDA 391

Query: 438 PANSILLGSGNAMVLDVLNL 457
               I  G+     L +   
Sbjct: 392 KLYEIGAGTSEVRRLIIGRA 411


>gi|148234611|ref|NP_001086893.1| acyl-CoA dehydrogenase family, member 9 [Xenopus laevis]
 gi|50416552|gb|AAH77618.1| Acad9-prov protein [Xenopus laevis]
          Length = 622

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/460 (18%), Positives = 166/460 (36%), Gaps = 50/460 (10%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL        +  +        R   +  +    A  L +        + +         
Sbjct: 106 GLFGMQIPEEYGGLGLSNTMYARLGEIISLDGAIAVTLAAHQAIGLKGILIAGNDEQKAK 165

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           + PK+ S E+                  LTE   G+D A+I S+     DG  + L+G K
Sbjct: 166 YLPKLASGEH-------------IAAFCLTEPGSGSDAASIQSRATLTPDGKHFLLNGSK 212

Query: 233 WFLSSPM-SDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            ++S+   +D F + A+ E      V    +   + + +  G+ + + ++K+G R + T 
Sbjct: 213 IWISNGGLADIFTVFARTEVVDKDGVTKDKISAFIVERAFGGVTHGKPEDKLGIRGSNTC 272

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARR 341
           EL F NT   +   +  V  G    M I   L+S   S+      +          YA  
Sbjct: 273 ELHFENTKVPVENVIGEVGGGFKVAMNI---LNSGRFSMGSASAGIIKKLIEMTAEYACT 329

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      L D  +++   A +A       ++++  A   D             + A + K
Sbjct: 330 RKQFNKKLSDFQLIQEKFALMAQKAFVMESMAYLTAGMMDRPGLPD-----CSVEAAMVK 384

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLE 459
            +  + A   ++EA++ +GG GY+++    R+ R+S    I  G+   + + +    +  
Sbjct: 385 VFSSEGAWLCVSEALQILGGLGYMKDYPYERYLRDSRILLIFEGTNEILRMYIALTGMQH 444

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-------------CKEDKGLARFLTE 506
            G  L  ++    + ++G + +     LRDS+                   +  A+ L E
Sbjct: 445 AGKILTGKIKEMKKGNVGVAMELFFKKLRDSMGRNVNLGLTGNEGVVHPSLEESAKKLEE 504

Query: 507 KIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +    +   + LYR G   + +     R  D   + + M
Sbjct: 505 NVYYFGTTVESLLYRFGKTIVEEQLALKRVADVIINLYAM 544


>gi|260574555|ref|ZP_05842559.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259023451|gb|EEW26743.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 591

 Score =  271 bits (693), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/496 (18%), Positives = 178/496 (35%), Gaps = 71/496 (14%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     + A  +     G      D  +             + ++  A +        + 
Sbjct: 71  VRTPTGFKAAFKAMQEGGWTSLDCDPDYGGQGLPYLMGAAVSEIFSSANMAFNMYQGLTH 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + S +    T      + PK+ S ++  T             + LTE + GTD+  + +
Sbjct: 131 GAYSAIHAHGTEAQKATYLPKMVSCDWTGT-------------MNLTEPQCGTDLGLMRT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED- 264
           + +  +DG Y ++G K F+S+   D       ++LA+  G       V  F+VP+ L + 
Sbjct: 178 KAEPQADGSYAITGTKIFISAGEHDLAENIIHLVLARAPGGAPGIRGVSLFIVPKFLVNP 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G+ N +   ++++K+G   +AT  + +    GFLLGDL+     +  M     L  
Sbjct: 238 DGSLGARNKVTAGKVEHKMGIHGSATCVMNYDGATGFLLGDLHKGMRAMFTMMNEARLGV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +   +    +   A+ YAR R                  LI  P ++R++ D    +  
Sbjct: 298 GLQGYAVAEAAFQNAVAYARERLQGRAVTGDANPAGPADPLIVHPDIRRSLMDQKSFVEG 357

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A A +   A+  D ++ + + AA A I  + P+ K +       +   A +  GG GYIE
Sbjct: 358 ARAFTLWGAHLIDRSRRQGDAAAEAMISLLTPVIKGFQTDKGFEMAVAAQQVWGGHGYIE 417

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
              +++  R++    I  G+     LD++   L   G       F+ ++           
Sbjct: 418 ANGMSQFVRDARIAMIYEGANGVQALDLVGRKLALDGGKPVMAFFAMMK----------- 466

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                  +  K++ G  R   + +          +    D+    +           +  
Sbjct: 467 -------AFIKDNDGDPRLKADFL-------LPLKKASKDVQAAAMHF-LGTAAKDPNAA 511

Query: 545 LHGRFNAAHIIDSLYL 560
           L G  +  H++    L
Sbjct: 512 LSGSTDFLHMMGHACL 527


>gi|149377504|ref|ZP_01895245.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358196|gb|EDM46677.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 599

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/431 (18%), Positives = 155/431 (35%), Gaps = 50/431 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A+        L+      G  W  D V+    +    ++ +  G      
Sbjct: 37  DMVDAIIGEGAKFCEQVLSPLNQVGDKEGCTWSEDGVKTPTGFKEAYQQYVEGGWPSMTA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D ++       +  +  + +   A    G     S  + + +    T    + +  K+ S
Sbjct: 97  DPNYGGQGLPHSLGLVMSEMVGTANWSWGMYPGLSHGATNTIEAHGTEEQKQTYLTKLIS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + S+ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGSDLGTLRSKAEPNADGTYSITGTKIFISAGEH 203

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++ G       +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMAENIVHIVLARLPGAPEGTKGISLFIVPKQLPNDDGSSGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        + +AI  +    +    ++ YA+ R  
Sbjct: 264 ATCVMNFDGAKGWLIGPENRGLNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKDRLA 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +         A AL +  A   D        + R
Sbjct: 324 MRSLSGPKNPEGIADPIIVHPDVRRMLLSQKAVAEGARALIYLTAQQADIVHSGKTEEDR 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  ++        M+  GG G+I E  + ++ R++    I  G+
Sbjct: 384 KAADEALGFLTPIAKAFLTEIGYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGT 443

Query: 447 GNAMVLDVLNL 457
                LD+L  
Sbjct: 444 TGIQALDLLGR 454


>gi|330503602|ref|YP_004380471.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
 gi|328917888|gb|AEB58719.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
          Length = 387

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    P    + R+    GL        +    +   AH +    +   +   
Sbjct: 31  PRAAQIDRDNEFPM--DMWRKFGDMGLLGMTVKEEYGGTDMGYLAHVLAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIHKNGSEAQKQKYLPKLCSGEH-------------IGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRAEKRGDRYVLNGNKMWITNGPDAHTYVIYAKTDINAGSRGMTAFIVERDF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L V  G V  +   +  +  ++S   
Sbjct: 196 KGFSRHQKLDKLGMRGSNTCELVFEDCEVPEENILGVEGGGVRVLMSGLDFERTVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M   +   + Y   R      + +  +++  +AD+   + A+ +  + +A + D  +
Sbjct: 256 TGIMSACMDVVLPYVHERQQFKQSIGEFQLVQGKLADMYAGMNASKSYLYNVAKACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  +MA  +  + ++ +GG+GY  E    R  R++    I  
Sbjct: 316 ESRKDAA-------AVILYTAEMATKMALDTIQLLGGNGYTNEYPAGRLLRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 369 GTSEIRRMLIGRELFNETR 387


>gi|320011992|gb|ADW06842.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 390

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 142/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD     +    P+   ++L  +   ++S              P+       G       
Sbjct: 2   SDRAQQPVERRLPTEESRQLVEIVRDIVSKEI----------APRAAEEEEAG------- 44

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           F P    +       GL    +  +     +     ++       A+L  G  +S    +
Sbjct: 45  FFP--RPVFTLLSEAGLLGLPYGSAHGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T        P              M    +     L+E   G+D A++ ++ 
Sbjct: 103 CHALAGYGTEEQRAAHLP-------------AMLAGGLLGAYCLSEPSSGSDAASLRTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  +         W     ++D + +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGEDWVLTGTKAWITHGGVADFYTVLART-GEDGPRGITAFLVPGDAQGLDAALPEKK 208

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +G+                L  A  +V   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRISGDRRIGEEGQGFAIALSALDSGRLGIAACAVGVAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D   + S +AA A  
Sbjct: 269 VRYATDRRQFGRPVADFQGLRFMLADMATQIEAGRALYLEAARLRDAGLAFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A  V  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|85709279|ref|ZP_01040344.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687989|gb|EAQ27993.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 381

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 147/405 (36%), Gaps = 33/405 (8%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G++ L+     +  MA   T       P    WD+    P     +++S   G       
Sbjct: 3   GQFALTDDQLAIQEMAQRFTA--DNITPHAGEWDEKHIFPI--DTIKQSAELGFGAIYVS 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    +S    +A M+    +  V   + P +   
Sbjct: 59  EESGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDRFGSQTVKDKYLPDLVGM 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D AA+ +  ++  D  Y L+G K F+S   S+
Sbjct: 119 -------------DKIASYCLTEPSSGSDAAALKTTAKRDGDH-YILNGTKQFISGAGSN 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
              +     G  G   +  ++ +    G+ +   + K+G  S  T +L   +    +   
Sbjct: 165 EVYVAMVRTGEDGPKGITCMVIEKDFEGVSFGANEKKLGWHSQPTAQLILEDVRVPV--- 221

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            N+  G  E  +I +       L+    S+ G +  L EA+ Y + R   G  + +    
Sbjct: 222 ENLVGGEGEGFRIAMMGLDGGRLNIGACSLGGAQRCLDEAVRYTKERSQFGKPVAEFQNT 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A D+ AA AL +  A         +E A      + + K        +V+  A
Sbjct: 282 QFTLADMATDLEAARALLYLAAAKV------TENAPDKTRFSAMAKRLATDNGSSVVDRA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GY+++  I R +R+   +SIL G+   M + V   L +
Sbjct: 336 LQLHGGYGYLQDYPIERFWRDLRVHSILEGTNQIMRMVVGRDLLR 380


>gi|330891274|gb|EGH23935.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 601

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 180/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       ++++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQGNEDNEAVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|257077075|ref|ZP_05571436.1| acyl-CoA dehydrogenase, short-chain specific [Ferroplasma
           acidarmanus fer1]
          Length = 377

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 145/378 (38%), Gaps = 31/378 (8%)

Query: 89  PGGERWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+ +E        +R     GL  S     +          +        A   
Sbjct: 23  PRAREIDEKMEVPEDIIQAMR---DMGLFASYIPEKYGGYGLSFPFLVNVIETISEACPS 79

Query: 148 AGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              ++  ++T  A  + +  +  ++K +  +I                    GL +TE  
Sbjct: 80  TALVLDGALTLFAEPLIMFGSEELNKKYLTEI--------------AKGAVGGLAITEPG 125

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D A+I+++ +K   G Y ++G K F+S+  ++  F+M A  +   G   +   + DG
Sbjct: 126 SGSDAASISTRAEKCEGG-YKITGTKTFISNGRIAKFFVMDASTDKSKGYKGITTFVVDG 184

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  GL   R  +K+G R ++TVEL F   F      +G+ N     + D      +  A 
Sbjct: 185 NAPGLEISRDIHKMGIRGSSTVELNFHEVFVPESNIVGEYNKGFSVIMDTLDAGRIGIAA 244

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +  EA+ Y   R      +ID   ++  IA++   I A+  L    A  +  
Sbjct: 245 QALGIARSAFHEALEYINTRKQFNKKIIDFQGIQFMIAEMESRIKASDLLIREAAEKWQN 304

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   E       ++ I K +    A  V   +++  GG GY  + +  RH R++    I
Sbjct: 305 HEDTVE-------LSSIAKMYASDTAVYVAERSLQLFGGYGYTTDFNAERHMRDAKITQI 357

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + K
Sbjct: 358 YEGTNEIQKIIISREIMK 375


>gi|315445940|ref|YP_004078819.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264243|gb|ADU00985.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 387

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 142/393 (36%), Gaps = 36/393 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+  A  A           P    WD+    P    +LR +   G+             
Sbjct: 13  IAETAAAFAE------KRLAPHALEWDETHHFPV--DVLREAAELGMAAIYCGEDAGGSG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++   +R       A       +S     A MV    T    K W PK+ S        
Sbjct: 65  LRRIDAVRIFEKLSTADPTVAAFLSIHNMCAWMVDSFGTEEQRKLWVPKLASM------- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247
                        LTE   G+D +A+ ++  +  D  Y L G K F+S    SD +I++A
Sbjct: 118 ------DAIASYCLTEPGAGSDASALRTKAVRSGDE-YVLDGVKQFISGAGTSDVYIVMA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  G  G   +   +      GL +   + K+G  +  T ++            L    G
Sbjct: 171 RT-GSDGPKGISAFVVPKETPGLSFGTDEVKMGWNAQPTRQVILEGARVPADALLGGPDG 229

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                 I +       ++ A  S+ G + +  + + Y   R   GG L+D+P ++  +AD
Sbjct: 230 EGTGFGIAMKGLNGGRINIAACSLGGAQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLAD 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  +  + AL +R A + D       E      +  + K +       V  +A++  GG
Sbjct: 290 MATALETSRALLWRAATALDNDHPDRVE------LCAMAKRYVTDACFEVADQALQLHGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GY+ E  + +  R+   + IL G+   M + +
Sbjct: 344 YGYLREYGLEKIVRDLRVHRILEGTNEIMRVVI 376


>gi|330505314|ref|YP_004382183.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919600|gb|AEB60431.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 601

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 181/491 (36%), Gaps = 60/491 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGSANWSWGMYPGLSHGAMNTLSAHGTDEQKHTYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   +     I YAR R  
Sbjct: 264 ATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGIKYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D        + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVQHSQNEEEK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  ++     +  M+  GG G+I E  + ++ R+   + +  G+
Sbjct: 384 KAADELLAFLTPIAKAFMTEVGFESASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGT 443

Query: 447 GNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
                LD+L    L+ +G  L  F ++     Q   + G + +    + ++   ++ G  
Sbjct: 444 TGVQALDLLGRKVLMTQGGALKNFTKIVHKFCQ--ANEGNESVKEFVEPLAKLNKEWGD- 500

Query: 502 RFLTEKIALAS 512
             +T KI +A+
Sbjct: 501 --ITMKIGMAA 509


>gi|194205574|ref|XP_001491178.2| PREDICTED: similar to Short/branched chain specific acyl-CoA
           dehydrogenase, mitochondrial precursor (SBCAD) (2-methyl
           branched chain acyl-CoA dehydrogenase) (2-MEBCAD)
           (2-methylbutyryl-coenzyme A dehydrogenase)
           (2-methylbutyryl-CoA dehydrogenase) [Equus caballus]
          Length = 494

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 128/360 (35%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MV 162
            ++++     GL     D  +          + A                   T  + ++
Sbjct: 153 KSVIQGLFQHGLMGIEIDTIYGGTGASFFSSVLAIEELAKVDASVALFCDLQNTLINTLI 212

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      +  K+ + E                   L+E   G+D  ++ ++  K  
Sbjct: 213 MKHGTEEQKATYLTKLATEE--------------IGSFCLSEAGAGSDSFSLKTRADKKG 258

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W   +  +  F+++A V+   G   +   L D    GL   + +NK+G R
Sbjct: 259 DYFVINGSKMWISHAEYAGLFLVMANVDPTRGYKGITCFLVDRGTEGLHIGKPENKLGLR 318

Query: 283 SNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  L F N        L            M     +  A   +   +      I Y 
Sbjct: 319 ASCTCPLTFDNVKVPEANVLGQIGHGYKYAIGMLNKGRVGIAAQMLGLAQGCFDYTIPYI 378

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L D   ++  +A +A  + AA  L++  A   +  +   +EA+ A      
Sbjct: 379 KERVQFGTRLFDFQGLQHQVAHVATQLEAARLLTYNAARLAEAGRPFIKEASMA------ 432

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  ++A    ++ ++ +GG+GY++   + +++R++   +I  G+ N  +  +   ++
Sbjct: 433 -KYYASEIAGRTTSKCIDWMGGAGYVKAYPVEKYFRDAKIGTIYEGTSNIQLNTIAKHID 491


>gi|146307662|ref|YP_001188127.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575863|gb|ABP85395.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 382

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/372 (21%), Positives = 149/372 (40%), Gaps = 28/372 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++ E  P    L +++   G+    +   +            AA   LM     G +
Sbjct: 32  DEWEEAEEFP--RELYQKAGAAGILGIGYPEQYGGSHEGDVFAKVAASEELMRCGSGGLV 89

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                    +  +     P V +  AP++ + E               + L +TE  GG+
Sbjct: 90  AGLGSLDIGLPPIVKWAKPAVRERVAPQVLAGE-------------KIMALAVTEPSGGS 136

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   V  LL +    G
Sbjct: 137 DVANLKTRAVRDGDH-YRISGSKTFITSGVRADYYTVAVRTGGEGFGGVSLLLVEKGTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R   K+G  ++ T EL F +       L+G  N     +        L  AIM+  
Sbjct: 196 FSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMANFQSERLSLAIMANM 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +++L E++ +AR R   G  +    V+K  +A++A  +  +   ++R A      +S 
Sbjct: 256 TAQLALEESLKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREFTYRQAAQMAAGRSV 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   SI  G+
Sbjct: 316 IKE-------ISMAKNFATDIADRLTYDAVQIMGGMGYMRESLVERLYRDNRILSIGGGT 368

Query: 447 GNAMVLDVLNLL 458
              M   +   +
Sbjct: 369 REIMNEIIAKQM 380


>gi|115524259|ref|YP_781170.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518206|gb|ABJ06190.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 379

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 143/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD+    P    L  ++   GL    +   +      Q    +    L       
Sbjct: 28  PYATEWDEAGGFP--RELYEKAASIGLLGLGFPEEYGGTPVDQFMWIVAVQELARAGAGG 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++ S   A  +A   +P +     P+I S                   L +TE  G
Sbjct: 86  VAASLNSSSIGAPPIARAGSPELKARVLPEIISG-------------KKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V  L+  G  
Sbjct: 133 GSDVANLRTSAKRDGDD-YVVNGEKTFITSGMRADYITTAVRTGGPGPGGVSLLVIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL    LK K+G  ++ T  L F N        L     G +  M       +  A   
Sbjct: 192 PGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGFLIIMMNFNSERISMAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +  +V L EAI YA+ R   G  L+   V++  + D+A  IAA+ A+   LA   ++ +
Sbjct: 251 TAASKVCLDEAIAYAKERVTFGKPLVKHQVIRHKLVDMAQRIAASQAMLEMLAWRLEQGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   E    +  A  T  +C        +EA++  GG+GY+    + R YR+   N+I  
Sbjct: 311 NPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGYMRGVKVERIYRDVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GAEEIMKDLASRQM 377


>gi|152985760|ref|YP_001349152.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960918|gb|ABR82943.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 382

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/362 (21%), Positives = 146/362 (40%), Gaps = 24/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++VE  P    L  ++   G+    +  ++            AA   LM        
Sbjct: 32  DEWEEVEEFP--RELYLKAGAAGILGIGYPEAYGGSCEGDLFAKVAASEELM------RC 83

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  + +      +  P V K   P     E        + +    + L +TE  GG+D+
Sbjct: 84  GSGGLVAGLGSLDIGLPPVVKWARP-----EVRERVVPAVLRGEKIMALAVTEPSGGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + ++  +  D  Y +SG K F++S +   +  +A   G  G   V  LL +    G  
Sbjct: 139 ANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFGGVSLLLVEKGTPGFS 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G  ++ T EL F +       L+G  N     +        L  A+M+    
Sbjct: 198 VGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQSERLALAVMANMTA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +++L E++ +AR R   G  +    V++  +A++A  +  +   ++R A      KS  +
Sbjct: 258 QLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTYRQAAKMSAGKSVIK 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   +I  GS  
Sbjct: 318 E-------ISMAKNFATDVADRLTYDAVQMLGGMGYMRESLVERLYRDNRILTIGGGSRE 370

Query: 449 AM 450
            M
Sbjct: 371 IM 372


>gi|225686562|ref|YP_002734534.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|256043671|ref|ZP_05446596.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111292|ref|ZP_05452318.1| acyl-COA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256262301|ref|ZP_05464833.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564861|ref|ZP_05835346.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990091|ref|ZP_06102648.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265992798|ref|ZP_06105355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|225642667|gb|ACO02580.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|260152504|gb|EEW87597.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763668|gb|EEZ09700.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000760|gb|EEZ13450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092027|gb|EEZ16324.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410948|gb|ADZ68012.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M28]
 gi|326554239|gb|ADZ88878.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M5-90]
          Length = 597

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|217970666|ref|YP_002355900.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217507993|gb|ACK55004.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 598

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/498 (20%), Positives = 201/498 (40%), Gaps = 64/498 (12%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLH-AYGPGGERWD--KVEFHPAWHALLRRSIHDGL 115
           E +   ++    +E  + A+     L+      G +W+  +V   P W     +    G 
Sbjct: 31  EEVSADLVDAILEEADKFASGVLAPLNWTGDQEGAKWNNGEVATAPGWKDAYTQFAESGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKD 173
                D  +      +   +  A + +         + P +TS ++ ALM   T      
Sbjct: 91  TALPCDPEYGGQGLPK--LLATAVMEMWKSANMAFSLCPMLTSGAIEALMLRGTDEQKNL 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ + E+  T             + LTE   G+D+AA+ ++ +   DG Y + G K 
Sbjct: 149 YLPKMIAGEWTGT-------------MNLTEPNAGSDLAAVRTKAEPQGDGTYKIFGQKI 195

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA++         +  F+VP+ + +     G+ N +    +++
Sbjct: 196 FITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVVPKFMVNADGSLGARNDVHCVSIEH 255

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T  L F +     G L+G+ N     +  M         +  ++    S   
Sbjct: 256 KLGIHASPTAVLAFGDKGGAIGTLVGEPNRGLEYMFIMMNEARFAVGMEGLALSERSYQH 315

Query: 335 AIHYARRRHVS------GGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           A+ YA+ R         GG    ++    ++R + ++     A  AL++ +  +FD+A  
Sbjct: 316 ALQYAKDRIQGTDAGVRGGPKVNILHHADVRRLLMNMKSKTEAMRALAYVVGAAFDKAHH 375

Query: 386 RSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++EA      A+  +M P+ K WC + +  V ++ ++  GG G+IEE   A+H+R+S  
Sbjct: 376 HADEAVRAQNQAFVDLMIPVVKGWCTENSIDVTSDGVQVHGGMGFIEETGAAQHFRDSRI 435

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-K 498
            +I  G+      D++           ++       +G+  K +  +  +   +  E   
Sbjct: 436 TTIYEGTTAIQANDLIG---------RKIARENGATVGAVVKMMRAVEAEVAGVQDEAFA 486

Query: 499 GLARFLTEKIALASSAAA 516
            +AR L + IA    A A
Sbjct: 487 AIARALGKGIAAVEEAVA 504


>gi|220920335|ref|YP_002495636.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219944941|gb|ACL55333.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 391

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 139/395 (35%), Gaps = 27/395 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R +  +  +     P  E  D+    P    L       GLH    +  +  +
Sbjct: 14  GETADAIRESVRDFAR-DRIAPRAEEIDRTNTFP--RDLWPEMGALGLHGITVEEEYGGL 70

Query: 128 VRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G    + S    + +    +    + + PK+ S      
Sbjct: 71  GLGYLEHCVAMEEVSRASASVGLSYGAHSNLCINQIRRNGSDAQKRRYLPKLISG----- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++ ++ +K  D         W  + P ++  ++ 
Sbjct: 126 --------DEVGALAMSEPGSGSDVVSMRTRAEKRGDRYVLTGSKMWITNGPEAETLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   L +    G    +  +K+G R + T EL F          L    
Sbjct: 178 AKTDPAAGPRGITAFLIEKGMKGFSTAQKLDKLGMRGSDTCELVFEECEVPEENVLGEVG 237

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             V  +   +  + A+++   +  M+  L   + Y   R   G  + +  +++  +AD+ 
Sbjct: 238 RGVNVLMSGLDYERAVLAAGPLGIMQACLDVVLPYVHERKQFGQPIGEFQLVQGKLADMY 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +   AA A  + +A + D  ++  E+AA A         +  + A     +A++ +GG+G
Sbjct: 298 VATNAAKAYVYAVAQACDRGETTREDAAGA-------ILYAAERATQCALDAIQLLGGNG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +    R  R++    I  G+     + +   L
Sbjct: 351 YINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|311695369|gb|ADP98242.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15]
          Length = 586

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/496 (17%), Positives = 169/496 (34%), Gaps = 60/496 (12%)

Query: 41  SLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KV 97
             L A +      V  E  + + E     ++  LA +              G +W+  +V
Sbjct: 12  PALWASLPKVAEHVDPETADAILEEAGKISSGVLAPLNREG-------DEQGCKWNDGEV 64

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                +    +  +  G +    +  F  +   +    +   +   A +  G     +  
Sbjct: 65  TSPEGFKEAYQTIVEGGWNGLGGNPDFGGMGMPKTLVAQFEEMMQGANMAFGLAPMLTAG 124

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    +  + + + P ++S  +             +  + LTE   GTD+  I ++
Sbjct: 125 ACLALDAHGSDELKEKYLPNMYSGVW-------------SGAMDLTEPHAGTDLGIIRTK 171

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG + ++G K F++    D       ++LA++         +  FLVP+ L +  
Sbjct: 172 AEPNDDGSFNVTGTKIFITWGEHDMAENIIHLVLAKLPDAPKGPKGISMFLVPKFLVNDD 231

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              G  N      L+ K+G + +AT  + F    G+L+G+ N     +  M     L   
Sbjct: 232 GSLGERNSFSCGSLEKKMGIKGSATCVMNFDGAKGWLVGEENKGLAAMFTMMNYERLGVG 291

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAA 369
           I  +     SL  A  YA  R  S               ++  P ++R +  +   +   
Sbjct: 292 IQGIGAAEASLQSAREYALDRIQSRAPTGAQQPEKAADPILVHPDVRRMLLTMKSYVEGG 351

Query: 370 TALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
              S  +A   D AK       R        ++ P+ K +             +  GG G
Sbjct: 352 RTFSTYVAQWLDIAKFAEDDERRKHAEGMVALLTPVAKAFLTDRGLDTCIMGQQVFGGHG 411

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDL-GSSG 480
           +I E    +  R+     I  G+     LD++     GT   L+E     +   L  +SG
Sbjct: 412 FIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGTQGKLYELFAQDVANFLEENSG 471

Query: 481 KKVITILRDSISLCKE 496
              +    + ++   E
Sbjct: 472 NDHLRPFLEPLAAAVE 487


>gi|254500692|ref|ZP_05112843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436763|gb|EEE43442.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 390

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 69/396 (17%), Positives = 144/396 (36%), Gaps = 31/396 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     + +Y      P  E+ D+ ++ P    L       GLH    +  +  
Sbjct: 12  DLGETADMLRDTVRSYSQDRIAPLAEKIDRDDWFP--RELWPEMGELGLHGITVEEEWGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S    + +         K +  K+ S E+  
Sbjct: 70  SGLGYLEHCIAMEEVSRASASIGLSYGAHSNLCVNQLRRWGNDDQKKRYLGKLVSGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  +  K  D         W  + P +D  I+
Sbjct: 128 -----------LGALAMSEPGAGSDVVSMKLRADKKGDKYILNGSKMWITNGPSADTMII 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDMDAGPKGMTAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGEV 236

Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++      M+ ++   I Y   R   G  +    +++  +AD+
Sbjct: 237 GKGVNVLMSGLDYERAVLAAGAVGIMQAAMDVVIPYVHEREQFGKPIGTFQLVQGKVADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            + + A+ A  + +A + D  ++  E+AA A         +  + A  +  +A++ +GG+
Sbjct: 297 YVSMNASKAYVYAVAKACDRGETTREDAAGA-------ILYAAENATKMALDAIQLLGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R  R++    I  G+     + +   +
Sbjct: 350 GYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREI 385


>gi|332978365|gb|EGK15088.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 594

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/520 (18%), Positives = 182/520 (35%), Gaps = 65/520 (12%)

Query: 73  LARMANYNTPQLHAYGPGGERW------DKVEFHPA-WHALLRRSIHDGLHCSIWDRSFE 125
           L  MA  +   L      G+        D V   PA +    ++    G      D  + 
Sbjct: 43  LEEMAKLSKNVLLPLNRTGDEEGATYQGDGVVTTPAGFKEAFKQYAEAGWIGLGGDPEYG 102

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                +      +   +    +A  L       A++  L   +    + +  K++S E+ 
Sbjct: 103 GQGFPK-MVTMLSEEMVFTTNQAFALYPNLSVGATLCLLASASEEQKQLYLEKMYSGEWS 161

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE   GTD+  I ++     DG Y +SG K F++    D   
Sbjct: 162 GT-------------MCLTEPHAGTDLGIIKTKANPNDDGSYSISGTKIFITGGEHDLTE 208

Query: 242 --AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+          +  F+VP+ + +     G  N L    +++K+G + +AT  
Sbjct: 209 NIIHLVLAKTPNAPEGSKGISLFVVPKFIVNEDGSLGERNSLAAGSIEHKMGIKGSATCV 268

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           + F    G+++G+ N     +  M     +   +  + G  ++   A  YA  R   G  
Sbjct: 269 MNFDGAKGWMIGEENTGLASMFVMMNYERVTMGLQGLGGTELAYQNAAAYALDRAQ-GRS 327

Query: 349 -------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEE 389
                        +I    ++R + +   +  A+   +  +A   DE+K      +    
Sbjct: 328 DTQIQSPEKPADQIIHHADVRRMLLNARANAEASRCFAMYVAKQLDESKFSVDPENAKAA 387

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA   ++ PI K +    A     +  +  GG GYI E  + +  R++    I  G+   
Sbjct: 388 AARVALLTPIAKAFLTDKALEATVDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGANGI 447

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             LD+L   +        E   + + +D  ++ K    I + ++      + L   +   
Sbjct: 448 QALDLLGRKIARNQGQYLENFLAEI-RDFVANMKADHEIKQATLDAASTIEELTTTVLTN 506

Query: 508 IALASSA----AALYRAGMNDIADVFLENRFLDNCHSTHC 543
           I+   S     A  Y   M  +   F+    ++  H    
Sbjct: 507 ISNRKSEINGCAVDYLHAMGYLCYAFMFAMMVEAAHDKEG 546


>gi|330967254|gb|EGH67514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 601

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/502 (18%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ I  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFIEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTKAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KSADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++G+  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEGVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGELTLKVGMAAMKD 512


>gi|329906036|ref|ZP_08274337.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547368|gb|EGF32198.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 596

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 90/458 (19%), Positives = 169/458 (36%), Gaps = 68/458 (14%)

Query: 88  GPGGERWDKVEF----HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G   DKV         + A  ++ +  G      D  +          +  +   +M
Sbjct: 62  DREGCHLDKVTHEVTPPKGFKAAYKQYVEAGWPSVSCDPEYGGQGLPL--VVNNSFYEMM 119

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +   L    TP     + PK+ S E+  T             + 
Sbjct: 120 NSANQAWTMYPGLSHGAYECLHEHGTPEQKALYLPKLVSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250
           LTE   GTD+  + S+ +  +DG + +SG K F+S+   D       ++LA++       
Sbjct: 167 LTESHCGTDLGMLRSKAEPQADGSFKISGGKIFISAGEHDMSENIVHLVLARLPDAPAGT 226

Query: 251 GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G+ N +    ++ K+G   N+T ++      G+++G  N  
Sbjct: 227 KGISLFIVPKFLPNADGSVGARNPIFCGAIEEKMGIHGNSTCQMNMDEATGWIIGQPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  M     L   + S+    V+   A+ YA+ R                  +I  P
Sbjct: 287 LNAMFVMMNAARLGVGMQSLGLTEVAFQNALVYAKDRLQMRSLTGVKAPEKAADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +           A S  +A   D      + + R + A    ++ PI K +    
Sbjct: 347 DVRRMLLTAKAYAEGGRAFSSYVALQIDKELNHPDEEVRKDAADEVALLTPIIKSFLTDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                +EAM+  GG G+I E  + ++ R+S  N I  G+     LD+L            
Sbjct: 407 GWIATSEAMQVYGGHGFIAEWGMEQYVRDSRINMIYEGTNTIQSLDLLG----------- 455

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +  D G+  +K    ++  +     D+ ++ F+T
Sbjct: 456 --RKVLMDNGAKLRKFGAKVQAFVEANGTDEAMSEFIT 491


>gi|194741350|ref|XP_001953152.1| GF17623 [Drosophila ananassae]
 gi|190626211|gb|EDV41735.1| GF17623 [Drosophila ananassae]
          Length = 405

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 140/380 (36%), Gaps = 32/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P    L+R+    G                      A          
Sbjct: 47  SANAAKCDREHLYPE--KLIRQMGELGTMAVAIPEELGGTGLDYLAYAIAMEEISRGCAS 104

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG +MS + +      L        + +               P           L+E  
Sbjct: 105 AGVIMSVNNSLYLGPLLSFGNDSQKETYI-------------TPYTTGKRVGCFALSEPG 151

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A ++      D         W  ++  ++A I+ A    ++    +   +    
Sbjct: 152 NGSDAGAASTIATDKGDHFLLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKG 211

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G    + ++K+G R ++T +L F +     +   ++   P    KI +  LD+  + +
Sbjct: 212 LKGFSLGKKEDKLGIRGSSTCQLIFEDC---AIPKESMLGEPGFGFKIAMQTLDAGRIGI 268

Query: 326 SGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +G      + +L  A+ Y+++R   G  +     +++ IAD++L + +A  L++R A   
Sbjct: 269 AGQALGIGQAALELAVDYSQKRQAFGKPISKLQSIQQKIADMSLAMESARLLTWRAAWLK 328

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAA A++ A        + A     + ++ +GG GY+ + +  RHYR++   
Sbjct: 329 DNKQPYTKEAAMAKLAA-------SEAATMCAHQCIQILGGMGYVTDMAAERHYRDARIT 381

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   + K
Sbjct: 382 EIYEGTSEIQRLVIAGSILK 401


>gi|91978757|ref|YP_571416.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91685213|gb|ABE41515.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 593

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/519 (19%), Positives = 198/519 (38%), Gaps = 67/519 (12%)

Query: 49  NFPSVVHKELEL--LGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFH 100
           N  + +   +    LG+Y    TAQ L     + +  L      G++       +KV   
Sbjct: 15  NHGAGLQAAVAAGHLGDYDSEITAQVLEEAGKFASDILAPLNRIGDKHGIKLEHNKVTTA 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P W    +R I  G +       F       A       ++  + +  G     ++++  
Sbjct: 75  PGWPDAYQRWIAAGWNAVSGPEQFGGQGLPSAVNAVCTEIWASSNMAFGLCPLLTLSAID 134

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +  +   +  K+ S E+  T             + LTE + G+D+ A+ ++ ++
Sbjct: 135 ALHAHGSDALKNIYLGKLVSGEWTGT-------------MQLTEPQAGSDVGALRTRAER 181

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED----- 264
            +DG Y + G K F++    D        +LA++         +  FL+P+ L +     
Sbjct: 182 AADGSYKIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGSL 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     +  M     L  A
Sbjct: 242 GARNDIFPSGVEHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLGVA 301

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATAL 372
           +  V     +  +A+ YA+ R               +I  P +KR +  +     AA  +
Sbjct: 302 LEGVGIADRAYQQALAYAQERKQGRAIGSTSTGSDPIIKHPDVKRTLLLMRALTGAARTI 361

Query: 373 SF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +       +A   D+ K +++ AA A ++ PI K +   +   V +  ++  GG G+IE
Sbjct: 362 CYSTAVALDVAARSDDPKIKADAAARAALLTPIAKAFSTDIGTEVASFGVQIHGGMGFIE 421

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL-------EQDLG 477
           E   A+HYR++    I  G+       L    L   G      L   L       E    
Sbjct: 422 ETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGVNGGASVWALLDELSVIVKNVEASND 481

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
            +       LRD++         +++L EK+  +++ A 
Sbjct: 482 PAFGATGPRLRDALDALTRA---SKYLLEKLGSSTNEAL 517


>gi|326329059|ref|ZP_08195388.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953141|gb|EGD45152.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 378

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 77/360 (21%), Positives = 131/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R++   GL C     ++       AH+             A      S   A  + 
Sbjct: 35  RDLWRKAGELGLLCLSIPEAYGGGGGTFAHEAVLIEEQARVGDTAFGASLHSGIVAHYLL 94

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W PK+ S E             V   + +TE   G+D+  I ++  K  D
Sbjct: 95  AYGTEEQKNEWLPKLASGE-------------VVSAIAMTEPGTGSDLQGIRTKAIKDGD 141

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++ + +D  ++  + +       +  ++      G    R+ +KIG +
Sbjct: 142 E-YVVNGAKTFITNGLLADMVLVAVKTDPEEAAAGISLVIVPTDAEGFRRGRVLDKIGMK 200

Query: 283 SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T EL F +        L      G V+ M  L    L  A+ SV+ M     E + Y
Sbjct: 201 GQDTCELFFDDVRIPASNLLGDKEGDGFVQLMMQLPQERLIVAVGSVAAMEFCFEETLRY 260

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +      K  +A+IA +   A +         DE      +       A 
Sbjct: 261 VNERTAFGRPVFGFQNTKFEMAEIATEARVARSF-------IDECVELHVKGELDIPTAA 313

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + KYW  + A  V+ + ++  GG G++EE  IAR + +     I  G+   M   +   L
Sbjct: 314 MAKYWSSERAGIVVDKCLQLFGGYGFMEEYPIARAFTDLRVQRIYAGTTEIMKEIISRSL 373


>gi|299141592|ref|ZP_07034728.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735]
 gi|298576928|gb|EFI48798.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735]
          Length = 576

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 92/431 (21%), Positives = 165/431 (38%), Gaps = 42/431 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R ++ +         A+ L   A     ++ S        +  
Sbjct: 93  ENIEATRQAGLWGISMPRRYDGLNIPNTVFSMASELIAAADAGFQNVWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K + P+I + E               + + LTE   G+D+  +  +  + +DG
Sbjct: 152 FGTEEQRKKYIPRISAGE--------------TMSMDLTEPDAGSDLQRVMLKATQDADG 197

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G   
Sbjct: 198 TWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHG 257

Query: 284 NATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           + T EL + N    L GDL +     V  +     L  A  SV   + +  EA+ YA+ R
Sbjct: 258 SPTCELVYKNAKCELCGDLKLGLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKER 317

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA- 391
              G  +I  P +   ++ +   + A  ++ +  A   D          E K   EE   
Sbjct: 318 AQFGKKIITFPAVYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKE 377

Query: 392 ------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A    PI K    + A     +A+   GGSG+I E    R YR++   SI  G
Sbjct: 378 MKQYNRLADAFTPIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLC--KED 497
           +    V+  +  +  GT L       E   S   Q L     K++ +  ++++     E+
Sbjct: 438 TTQLQVVAAVRYITNGTYLGIMKEMLEAPVSDNMQPLKMRIAKLVALYEEALNKVNGDEN 497

Query: 498 KGLARFLTEKI 508
           +    FL  ++
Sbjct: 498 QDEHDFLARRL 508


>gi|27376269|ref|NP_767798.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349409|dbj|BAC46423.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 596

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/550 (18%), Positives = 197/550 (35%), Gaps = 70/550 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
               +N   +D   +    N P             V      E A++A      L     
Sbjct: 7   PVEDVNFLLNDVFQIDRYDNLPG-----FSDASSDVREAILGEAAKLAEE---VLQPLNR 58

Query: 90  GGE-----RWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            G+     R D   V     +    ++    G         F                 +
Sbjct: 59  VGDLEGCKRADDGSVTTPKGFKDAFKQVAEGGWLGLSAPTEFGGQGLPVTLSQAVNEFQI 118

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A +        ++ + + + +  +P   K + PK+ + E+  T             + L
Sbjct: 119 SANMAFSMYGGLTMGATAALIVHGSPEQKKTYVPKMVAGEWTGT-------------MNL 165

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  + ++  + +DG + ++G K F+S+   D       ++LA++EG      
Sbjct: 166 TEPHCGTDLGMLRTKAVRQADGSFKITGTKIFISAGEHDLADNIIHLVLARIEGAPAGIK 225

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            V  F+VP+ L +     G+ NG+    +++K+G   N+T  + + +  G+L+G+ N   
Sbjct: 226 GVSLFVVPKFLVNADGSVGARNGVVCGSIEHKMGIHGNSTCVMNYDSATGWLIGEENKGM 285

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L  A+  ++   V+   A+ YAR R                  +I  P 
Sbjct: 286 QGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERIQGRSLTGTKAPDKPADPIIVHPD 345

Query: 355 MKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  I     AA A          +A+  ++AK R     +  +M P+ K +     
Sbjct: 346 VRRTLLSIRAFNEAARAFVMWTALKSDVAHRSEDAKDRQAADDHMGLMTPVLKGFLTDYG 405

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
            A   +A +  GG GYI E+ + +  R++    I  G+     LD++   L   G     
Sbjct: 406 FANAVQAQQMYGGHGYIAEQGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAIM 465

Query: 467 QLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRA 520
             F  +      +G  + +   +    +     +    +L +   +    A +AA  Y  
Sbjct: 466 AFFGEVMAFAKENGGDEALKPFITPLSASLGHLQQATTWLMQNAMMKPDNAGAAATDYLH 525

Query: 521 GMNDIADVFL 530
               +A  ++
Sbjct: 526 LFGFVALGYM 535


>gi|196009394|ref|XP_002114562.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens]
 gi|190582624|gb|EDV22696.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens]
          Length = 370

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 116/279 (41%), Gaps = 16/279 (5%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                   T       L+E   G+D  A+ ++     D         W  +S  +D F++
Sbjct: 98  EKYLSQLATKSVGCFCLSEFGSGSDAFALQTRAVADGDHFVLNGTKAWISNSEHADIFLV 157

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A      G   +   + + +  GL   + ++K+G R+++T  +   N         N+ 
Sbjct: 158 FANASPEKGYKGITCFIVERNMPGLSLGKKEDKLGIRASSTCPVILENVRVPES---NIM 214

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               E  KI I  L+   +S++   V LA+     AI Y   R      + D   ++  I
Sbjct: 215 GKFGEGYKIAIGILNEGRISIASQMVGLAQGALDAAIPYTMERKQFNQRIFDFQGVQHQI 274

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+++  +AAA A+++  A      K   +E A A       KY+  +MA  V ++A+E +
Sbjct: 275 AEMSTMVAAARAITYDAARLKVAGKPVVKEGAMA-------KYFASEMAQKVSSKALEWL 327

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG G+ ++  + + YR++    I  GS N  +  +   +
Sbjct: 328 GGVGFTKDFPVEKFYRDAKIGVIYEGSSNIQLNTIAKYV 366


>gi|108763116|ref|YP_631979.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108466996|gb|ABF92181.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 380

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 129/380 (33%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P   +WD+   H AW    +++     L                     A          
Sbjct: 26  PNARKWDE---HHAWPTDAVKKLAELSLLGVAVPEQNGGAGLDNVCYAIAMEEISRGCAS 82

Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            G +MS  +      +    T    + +              AP  +       GLTE  
Sbjct: 83  TGVIMSVNNSLYCDPIMKYGTDAQKEQFL-------------APFARGEKLGCFGLTEPE 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D AA  +   +  D         W  + P +DA +++       G   +   +    
Sbjct: 130 AGSDAAAQKTVAVRKGDEYVINGSKNWITNGPKADAIVLMTMTNKEAGHKGITAFMVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G        K+G  +  +  + F +        L       E  KI +       +  
Sbjct: 190 TPGFIRAEPDKKMGISAAWSCSMFFEDMRVPAKYMLGKEG---EGFKIAMSTLDGGRIGI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++   R +  EA+ Y+  R   G  + +   ++  IAD+A +I AA  L +R A   
Sbjct: 247 ASQALGIARAAYEEAVRYSGERKSFGKPIREHQAIQFMIADMATEIDAARLLVWRAALQK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    S E+A A       K +  +MA  V  +A++  GG GY +E  + RH R++   
Sbjct: 307 DKGVRHSAESAMA-------KLYASEMASRVANKALQVHGGMGYSKEMDVERHVRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L +
Sbjct: 360 EIYEGTSEIQRIVIAANLLR 379


>gi|225629267|ref|ZP_03787300.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|225615763|gb|EEH12812.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
          Length = 617

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/572 (19%), Positives = 197/572 (34%), Gaps = 74/572 (12%)

Query: 9   RLAMNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67
           R++M     P  D+ F LN    +   N       L       P VV   L   G  +  
Sbjct: 18  RISMPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAE 70

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            T   + + A+            G     V     +          G         +   
Sbjct: 71  GTLFPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQ 123

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDP 185
                + +  A    M+       M P +T  ++ A+    T      + PK+    +  
Sbjct: 124 GLP--YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTG 181

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--- 242
           T             + LTE   GTD+  + +     +DG Y +SG K F+S+   D    
Sbjct: 182 T-------------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSEN 228

Query: 243 --FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  +
Sbjct: 229 IIHLVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVM 288

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
            +    G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R       
Sbjct: 289 NYDEATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALS 348

Query: 348 ----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------ 391
                      +I  P ++R + +I     A  AL   +A   D A    +EA       
Sbjct: 349 GAVAPEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADD 408

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     
Sbjct: 409 LVGLLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQA 468

Query: 452 LDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           LD++   L   G       F  + +  +     +K+    +       + +    +L + 
Sbjct: 469 LDLVGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQN 528

Query: 508 IAL----ASSAAALYRAGMNDIADVFLENRFL 535
                  A +A+  Y      +A  ++  R  
Sbjct: 529 AMAKPDNAGAASNDYMHLFGLVALGYMWARMA 560


>gi|218781160|ref|YP_002432478.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762544|gb|ACL05010.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/493 (19%), Positives = 182/493 (36%), Gaps = 62/493 (12%)

Query: 82  PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P        G  WD   V   P++H   +            D         Q     +  
Sbjct: 55  PTREESDRVGATWDDGNVTVPPSFHRAYKLFREGEWLTIADDIEVGGQGMPQVLAFASLE 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L+  A +           +  ++ +  +    K +  K++S E+  T             
Sbjct: 115 LFAAANMAFSIYTMLGHGAGKLIEVYGSELQKKMFLGKVYSGEWGGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+D+ A+T+   K  DG Y ++G+K F+S+   D        +LA++EG   
Sbjct: 162 MCLTEPEAGSDVGALTTTAVKNEDGTYNITGNKIFISAADHDLVDNVVHPVLARIEGDPA 221

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  FLVP+   +     G  N +   R++ K+G  ++AT  ++F       G LLG
Sbjct: 222 GTSGISIFLVPKYWVNEDGTTGDYNNVYVDRIEEKMGIHASATCSVQFGAKGPCRGLLLG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGI 348
           +       +  M     L+  +  +     +   A++YAR R               G  
Sbjct: 282 EERKGMRIMFHMMNEERLNVGVQGLGSASAAFLLALNYARERVQGKEILKSRDPEAKGAT 341

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKY 402
           +I+ P ++R +  +   +    +L++      D+       + +S       ++ PI K 
Sbjct: 342 IINHPDVRRMLLQMKAYVEGLRSLNYYTGYCMDKVVTSESDEEKSLYQGIVDLLTPICKG 401

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +  + +  V  +A++  GG G+ +E  + +  R++   +I  G+      D+L   + G 
Sbjct: 402 YTTEKSVLVCNDAIQTYGGYGFTKEYPVEQLARDTKILTIYEGTTGIQAADLLGR-KLGM 460

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA----LY 518
              +     LEQ   +  K     L  + +L +  +      +E       AAA    L 
Sbjct: 461 QKGQVFMKFLEQINATIAKG--KELEATKALAENLEKAVIKFSETAMSVGKAAASEKVLA 518

Query: 519 RAGMNDIADVFLE 531
             G    A  F+E
Sbjct: 519 AFGH---ATPFME 528


>gi|153808413|ref|ZP_01961081.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185]
 gi|149128735|gb|EDM19952.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185]
          Length = 568

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 103/497 (20%), Positives = 184/497 (37%), Gaps = 56/497 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE +        A   +   P    +   G    +VE+       L   +  GL+ 
Sbjct: 55  LEITGE-ITGEIIAANAEGVDEEGP----HCANG----RVEYASGTKQNLDAMVKAGLNG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +          A +   A    G++ S        +        H  + P+
Sbjct: 106 MTMPRQFGGLNFPITPYTMCAEIVAAADAGFGNIWS-LQDCIETLYEFGNADQHSRFIPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           I   E               + + LTE   G+D+ ++  +      DG + L+G K F++
Sbjct: 165 ICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +D  ++LA+ E G      +   + D    G+  +R++NK+G   + T EL + N  
Sbjct: 211 NGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  E + YA+ R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD-----------------EAKSRSEEAAYARIMA 397
           +   +A +   + A  AL ++ A   D                 E + + + A  A    
Sbjct: 331 VYDMLAIMKGKLDAGRALLYQTARYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSG++ E +  R YR++   SI  G+     +  +  
Sbjct: 391 PLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRY 450

Query: 458 LEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRDSISLCKEDKGL------ARFLT 505
           +  G+ +     FE +  + E + L S  KK+      S +  KE +        AR L 
Sbjct: 451 VTNGSYIATIREFEAIPCSPEMEPLMSRLKKMADKFEASTNAVKEAQDQELLDFTARRLM 510

Query: 506 EKIALASSAAALYRAGM 522
           E  A    +  L +   
Sbjct: 511 EMAADIIMSHLLIQDAS 527


>gi|254293966|ref|YP_003059989.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254042497|gb|ACT59292.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 382

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 146/400 (36%), Gaps = 28/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L  TA  +               P     D     P    L       GLH      
Sbjct: 5   DFALGETANMIRETCRRFAH--DKISPIAAEIDASNKFP--RHLWPLMGDLGLHGITVSE 60

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
               +      H +    +   +        + S    + +    T +  K + PK+ S 
Sbjct: 61  EDGGLGLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQIRRWGTDQQKKKYLPKLISG 120

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+  + ++ +K+  G        W  ++P +D
Sbjct: 121 EH-------------VGSLAMSEAGAGSDVLGMVTKAEKVDGGYLLNGTKFWITNAPEAD 167

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ A+ +       V   L +    G    +  +K+G R + T EL F + F      
Sbjct: 168 TLVVYARTDPNNKNQGVTTFLIEKEFEGFSVSKKLDKLGMRGSDTAELVFEDCFVPESNI 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +    G  + +   +  +  ++S   +  ++  L   I Y + R   G  +    +++  
Sbjct: 228 MGEVHGGAKVLMSGLDYERVVLSAGPLGIIQACLDVCIPYVKDRKQFGKPIGSFQLVQAK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+ + + +A A ++ +A + D  ++   +AA A ++A        + A     EA++ 
Sbjct: 288 IADMYVALNSARAYTYAVARACDAGQTTRFDAAGAILLA-------SENAVKSSLEAIQT 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+GY++E  + R  R++    I  G+       +   L
Sbjct: 341 LGGAGYLKEWPVERFLRDAKLYDIGAGTNEIRRFLIAREL 380


>gi|195019873|ref|XP_001985073.1| GH14704 [Drosophila grimshawi]
 gi|193898555|gb|EDV97421.1| GH14704 [Drosophila grimshawi]
          Length = 419

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 144/433 (33%), Gaps = 47/433 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
             L  L+A+        +   G  + L+   Q+L  +A   T     P    Y   G   
Sbjct: 10  PALRQLVASRSYAAVSHVSPTGTSFALTEEQQQLQELARKFTREEIIPVAAQYDKSG--- 66

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      +++++   GL  +        +          A             +  
Sbjct: 67  ---EYP---WPIIKKAWELGLMNNHIPAELGGLELDVFTTCLTAEELAYGCTGIMTALEA 120

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V L       K +  ++              +  +     +TE   G+D++ I
Sbjct: 121 SGLGQTPVILSANKEQKKKYLGRLL-------------EEPLVAAYCVTEPGAGSDVSGI 167

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + D    GL 
Sbjct: 168 KTRAEKKGDEYVLNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVDRDTPGLT 227

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 228 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLVGEGAGFKIAMGTFDKTRPPVAAGAV 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  + EA+ YA  R   G  +     ++  +AD+A+ +  +       A   D+ + 
Sbjct: 285 GLAQRCMDEALKYALERKTFGVPIAHHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRR 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K     MA  + ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 345 NS-------YYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEG 397

Query: 446 SGNAMVLDVLNLL 458
           +     L +   +
Sbjct: 398 TSQIQRLIISRNM 410


>gi|167462606|ref|ZP_02327695.1| butyryl-CoA dehydrogenase [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322381522|ref|ZP_08055501.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154529|gb|EFX46826.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 592

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/457 (17%), Positives = 164/457 (35%), Gaps = 35/457 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL  +     ++ +   +      +     A      + +        +  
Sbjct: 63  DLLKKAGELGLLSADVPEEYDGLGLDKVSSTIISETLARAASFGLSVGAHVGIGTLPIVF 122

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP   K + P++ + E                   LTE   G+D     +  +   DG
Sbjct: 123 FGTPEQKKKYLPQLATGE-------------KIAAYCLTEPASGSDALGAKTTAKLSEDG 169

Query: 225 -IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D FI+ A+V+G+         + +    G      + K+G +
Sbjct: 170 QHYILNGSKIFITNAGFADIFIVYAKVDGKD----FSAFIVEKEMPGFSLGPEEKKMGIK 225

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L F +    +   L  V  G +    IL           + G + ++  ++ YA
Sbjct: 226 GSSTRPLYFEDCKVPVENLLGEVGRGHIIAFNILNIGRFKLGAGCLGGAKEAIEHSVKYA 285

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
             R   G  +   P++ + +AD+ +    A ++ +R +   D              K  +
Sbjct: 286 NTRKQFGTEISSFPLIGKKLADMNIRTFVAESMVYRTSGLIDHILKDLDHSSPDAGKQSA 345

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   +   I K +  ++   V  EA++  GG G+ +E  + R YR+S  N I  G+ 
Sbjct: 346 KGIAEYALECSINKVFASEVLDFVADEAVQIHGGYGFTQEYKVERIYRDSRINRIFEGTN 405

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               + +   L K     E       Q L S    +    +      +++  L     +K
Sbjct: 406 EINRMLIPGTLLKKAMKGELPLLQKVQSLQSEMMSMTPGSQSFEGTLEQESHLLAQ-AKK 464

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           + L     A+ +   N   +  + +   D     + M
Sbjct: 465 LFLMVGGMAVQKLQANIEKEQEMLSNLADLMIEIYAM 501


>gi|145225179|ref|YP_001135857.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217665|gb|ABP47069.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 381

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 133/366 (36%), Gaps = 24/366 (6%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +E H     L  R+   GL C      +       AH+             A      S 
Sbjct: 36  IEQHHVDRDLWTRAGDLGLLCMSIPEQYGGGGGTFAHEAVLIEEQARIGDSAWGAPLHSG 95

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A  +    T    + + P++ + E                 + +TE   G+D+ ++T+
Sbjct: 96  IVAHYLLEYGTDEQKERFLPRLATGEM-------------VGAIAMTEPGTGSDLQSVTT 142

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  ++ D         +  +   +D  I++A+ +   G   +  +L +G   G    R+ 
Sbjct: 143 KASRVGDEYVVNGSKTFITNGAQADLIIVVAKTDPSAGANGISLVLVEGDRPGFRRGRVL 202

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
           +K+G R   T EL F +    +   L      G ++ M+ L    L  A+ +V+ +  +L
Sbjct: 203 DKVGQRGQDTSELYFEDVHIPVENLLGTTEGQGFIQLMQQLPQERLILALGAVTVLETAL 262

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y + RH  G  +      K  +A++A D   +           D+  +R      
Sbjct: 263 EFTVEYTKDRHAFGKPVFAFQNTKFKLAEVATDAHISRVF-------IDDCVARHLRGEL 315

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K+W  + A   + + ++  GG GY+ E  I R + ++    I  G+   M  
Sbjct: 316 DIPTVAMAKWWTTERAMVALDDCLQLHGGYGYMTEYPIGRMWADARVQKIYGGTNEIMKE 375

Query: 453 DVLNLL 458
            +   L
Sbjct: 376 IIARSL 381


>gi|262278684|ref|ZP_06056469.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259035|gb|EEY77768.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 383

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 135/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +E +    +     A  L   +      + + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTETQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P++   E             V     LTE   G+D A++ +   K  D  Y L+G
Sbjct: 106 KSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKTSAVKDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+    + G   +   + D    G+   +   K+G +   T +
Sbjct: 152 TKRFITNAPHAGVFTVMARTSSDIKGAGGISAFIVDSQTPGISLGKRDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +SV      L +++ YA  R  
Sbjct: 212 VIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLKYAIERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAARCMVLDAARLRDAGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   + +  +
Sbjct: 325 TEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIARNMIRAAS 383


>gi|126461936|ref|YP_001043050.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126103600|gb|ABN76278.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
          Length = 385

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 142/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   R D+    PA   L R     GL        F    +   AH +    +   +   
Sbjct: 31  PMAARIDRENVFPA--ELWREMGELGLLGITVPEEFGGSDMGYLAHTVAVEEVARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  +P     + PK+ S E+                L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIRLNGSPEQKARYLPKLVSGEH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMKLKAEKRNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T EL F N         NV     + +++L+  LD       
Sbjct: 196 TGFSTSPHFDKVGMRGSNTGELIFENCEVPF---ENVLGQDGKGVRVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    M   L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D
Sbjct: 253 GIGTGIMAACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +AA           +  + A     +A++ +GG+GY+ +  ++R +R++    
Sbjct: 313 AGRVTRADAAG-------CVLYASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L  G
Sbjct: 366 IGAGTSEIRRMLIGRELMAG 385


>gi|120555660|ref|YP_960011.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325509|gb|ABM19824.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 596

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/525 (16%), Positives = 179/525 (34%), Gaps = 70/525 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAWHALLR 108
           P      LE  G+ + S     L R A+            G +W++  V     +    +
Sbjct: 37  PDTADAILEEAGK-ITSGVLAPLNREADEQ----------GCKWNEGEVSTPEGFKEAYQ 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
             +  G +    +  F  +   +    +   +   A +  G     +  +   +    + 
Sbjct: 86  TIVEGGWNGLGGNPDFGGMGMPKTLVAQFEEMMQGANMAFGLAPMLTAGACLALDAHGSQ 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + P ++S  +             +  + LTE   GTD+  I ++ +   DG + +
Sbjct: 146 ELKEKYLPNMYSGVW-------------SGAMDLTEPHAGTDLGIIRTKAEPNDDGSFSI 192

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F++    D       ++LA++         +  FLVP+ + +     G  N    
Sbjct: 193 TGTKIFITWGEHDMAENIIHLVLAKLPDAPKGPKGISLFLVPKFMVNDDGSLGERNQFSC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             ++ K+G +++AT  + F    G+L+G+ N     +  M     L   I  +     SL
Sbjct: 253 GSIEKKMGIKASATCVMNFDGAKGWLVGEENKGLAAMFTMMNYERLGVGIQGIGAAEASL 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A  YA  R  S               ++  P ++R +  +   +    A S  +A   
Sbjct: 313 QSAREYANERIQSRAPTGAQQPEKAADPILVHPDVRRMLLTMKSYVEGGRAFSTYVAQWL 372

Query: 381 ------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D  + R        ++ P+ K +             +  GG G+I E    +  
Sbjct: 373 DISKYSDNDEQRKHAEGMVALLTPVAKAFLTDRGLDTTIIGQQVFGGHGFIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQ--DLGSSGKKVITILRDS 490
           R+     I  G+     +D++     G    L+E     +    +  SS + +   L   
Sbjct: 433 RDCRITQIYEGTNGIQAMDLMGRKVVGSQGKLYELFAQDVAAFIEANSSDEALRPYLEPL 492

Query: 491 ISLCKEDKGLARFLTEKIAL------ASSAAALYRAGMNDIADVF 529
            +  +    +   +  + A       A++   L   G   +A ++
Sbjct: 493 AASLERLSDVTEHVVNQAANNPEAIGAAAVDYLDMFGYTALAYMW 537


>gi|291220761|ref|XP_002730394.1| PREDICTED: short-chain acyl-CoA dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 417

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 135/363 (37%), Gaps = 30/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +++    GL        +            A           G +MS + +      L
Sbjct: 71  EQIKKMGELGLMAIDVPEKYGGTGLDYLAYAIAIEEISRGCASCGVIMSVNNSLYLGPLL 130

Query: 165 M-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P          GL+E   G+D  A ++  +  +D
Sbjct: 131 YYGTEAQKEKYV-------------TPFVNGDRVGCFGLSEPGNGSDAGAASTTARLEND 177

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +   ++A ++ A  +  +    +   +      GL   + ++K+G R+
Sbjct: 178 QWVLNGTKAWITNGFEAEAAVVFATTDKSLKHKGISAFITPKPMEGLSLGKKEDKLGIRA 237

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++T  L + +     +   ++   P    KI ++ LD   + ++   + +A+     A+ 
Sbjct: 238 SSTTYLIYEDAK---IPKDHLLGEPGFGFKIAMMTLDDGRIGIASQALGIAQASLECAVE 294

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   G  +     ++  +AD+   + +A  L+++ A   D  K  ++E+A A++ A
Sbjct: 295 YALKRESFGRPIAKLQAIQMKLADMETRLESARLLTWKAAMLKDAGKPYTKESAMAKLAA 354

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +C         +A++ +GG GY+ E    RHYR++    I  G+     L +   
Sbjct: 355 SEAATFC-------AHQAIQVLGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGQ 407

Query: 458 LEK 460
           L K
Sbjct: 408 LIK 410


>gi|239503627|ref|ZP_04662937.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 383

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 138/373 (36%), Gaps = 31/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSV 156
           E  P     ++     GL        +E +    +     A  L   +      + + + 
Sbjct: 35  EIPPDIVEQMK---ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +S + +  T      + P++   E             V     LTE   G+D A++ +
Sbjct: 92  IGSSGLIIDGTEAQKSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKT 138

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQR 274
              K  D  Y L+G K F+++ P +  F ++A+      G   +   + D    G+   +
Sbjct: 139 SAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGK 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
              K+G +   T ++ F N        +      G    MK+L    L  A +SV     
Sbjct: 198 RDKKMGQKGAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATR 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L ++++YA  R   G  +    +++  +AD   +I AA  +    A   D  ++ S E 
Sbjct: 258 MLDDSLNYAIERKQFGQPIAQFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   K +  +M   V    ++  GG+GYI E +I R YR+     +  G+    
Sbjct: 317 ------ASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQ 370

Query: 451 VLDVLNLLEKGTN 463
            + +   + +  +
Sbjct: 371 QVIIARNMIRAAS 383


>gi|226360658|ref|YP_002778436.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226363908|ref|YP_002781690.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239143|dbj|BAH49491.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242397|dbj|BAH52745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 384

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 146/403 (36%), Gaps = 36/403 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  TA++ A              P    WD+ +  P    +LR++   G+       
Sbjct: 8   ERAIRDTARDFAAE---------HLAPHAVEWDQTKHFPV--DVLRKAASLGMGGIYVRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +    R               +S       M+    T      W P++ + +
Sbjct: 57  DVGGSELTRVDAARIFEQLAKGCPSIAAYISIHNMVTWMIDRFGTEEQRHQWVPRLCAMD 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA++++  +  D    L+G K F+S    S+
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAALSTRAVRDGDDF-VLNGVKQFISGAGTSE 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++ F +       L
Sbjct: 163 VYVVMART-GEGGPRGISAFIVPKESAGLSFGPNEVKMGWNAQPTRQVIFEDVRVPAANL 221

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  SV G + +L +A+ Y   R   G  L+D   ++  
Sbjct: 222 LGSEGGGFRIAMAGLNGGRLNIAACSVGGAQTALDKAVAYLADRKAFGAALLDSQALQFQ 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  ++ AA  L +R A + +E      E      +  + K +       V   A++ 
Sbjct: 282 LADMRTELEAARTLLWRAAAALEEGAPDVVE------LCAMAKRFATDTGFEVANRALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG GY+ E  I +  R+   + IL GS   M + +   +  G
Sbjct: 336 HGGYGYLAEYGIEKIVRDLRVHQILEGSNEIMRVVIARSIIAG 378


>gi|27374374|gb|AAO01112.1| Arc42-PA [Drosophila pseudoobscura]
          Length = 405

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 141/381 (37%), Gaps = 33/381 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQL 146
            P   ++D+   +PA    +++    G+                      A   +     
Sbjct: 46  SPNAAKFDREHLYPA--QQIKQMGELGVMSVAIPEELGGGTGLDYLAYAIAMEEISRGCA 103

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            AG +MS + +      L        + +     + E                   L+E 
Sbjct: 104 SAGVIMSVNNSLYLGPLLGFGNAAQKEAFITPYTTGE-------------RVGCFALSEP 150

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D  A ++   +  D         W  +   + A ++ A    ++    +   +   
Sbjct: 151 GNGSDAGAASTVATEKGDHYVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISAFIVPK 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G    + ++K+G R ++T +L F +        L     P    KI +  LD+  + 
Sbjct: 211 GLKGFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLG---EPGFGFKIAMQTLDAGRIG 267

Query: 325 VSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++G      + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A  
Sbjct: 268 IAGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAMESARLLTWRAAWL 327

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++ ++EAA A++ A      C         + ++ +GG GY+ +    RHYR++  
Sbjct: 328 KDNKQAYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVADMPAERHYRDARI 380

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     L +   + K
Sbjct: 381 TEIYEGTSEIQRLVIAGSILK 401


>gi|62465535|gb|AAX83264.1| short-chain acyl-CoA dehydrogenase [Equus caballus]
          Length = 332

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 16/290 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  S+E       P           L+E   G+D  A ++  +   D         W  +
Sbjct: 53  KFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITN 112

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S  + A ++ A  +  +    +   L      GL   + ++K+G R+++T  L F +   
Sbjct: 113 SWEASATVVFASTDRSLQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCR- 171

Query: 297 FLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
             +   N+   P    KI +  LD   + ++   + +A+     A++YA  R   G  L 
Sbjct: 172 --IPKDNLLGEPGMGFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLT 229

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +AD+AL + +A  L++R A   D  K  ++EAA A++ A        + A A
Sbjct: 230 KLQGIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATA 282

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +A++ +GG GY+ E    RHYR++    I  G+     L +   L K
Sbjct: 283 ISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 332


>gi|254419633|ref|ZP_05033357.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185810|gb|EDX80786.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 379

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 147/404 (36%), Gaps = 31/404 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   + +   A      +L  +     RWD+ +  P    +++++   G       
Sbjct: 2   DFALNDDQRAIQDAARAFADAELAPHSA---RWDEDKHFPV--EVMKQAAELGFCGIYTG 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +              +     +S    +  M+    +  +   + P + S 
Sbjct: 57  EEHGGMALGRVEAAVIFEELSRGDVATAAFISIHNMATWMIDKFGSDDLRGRFVPSLVSM 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMS 240
                               LTE   G+D AA+ +   +  D  Y L+G K F+S    S
Sbjct: 117 -------------DKIASYCLTEPGSGSDAAALRTTAVRDGDH-YVLNGSKAFISGAGTS 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           D ++++ +  G  G   V  ++ +    GL +   + K+G  +  T  ++F +       
Sbjct: 163 DVYVVMVRTGGE-GPKGVSAIVAEAGTPGLSFGAQERKMGWNAQPTAIVQFDDCRVPVAN 221

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLGD                L+ A  S+ G R++L  A  Y   R   G  + +  V++ 
Sbjct: 222 LLGDEGAGFRYAMAGLDGGRLNIAACSLGGARLALETAQDYVATRKQFGRPIGEFQVLQF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A D+ A   +  R A + D                 + K         +  EA++
Sbjct: 282 RLADMATDLEAGRLMVLRGAWAIDTDHPGK------TKWCAMAKRLATDACFQIADEALQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             GG GY+++  + R  R+   + IL G+   M + +   L +G
Sbjct: 336 LHGGYGYLKDYPLERIVRDLRVHRILEGTNEIMRVIIARELARG 379


>gi|114656361|ref|XP_001143192.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 6 [Pan
           troglodytes]
          Length = 407

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 125/379 (32%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 43  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 102

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 103 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 149

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 150 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 209

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 210 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 269

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 270 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 329

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 330 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 382

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 383 LYEIGAGTSEVRRLVIGRA 401


>gi|293608460|ref|ZP_06690763.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829033|gb|EFF87395.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 600

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 84/489 (17%), Positives = 174/489 (35%), Gaps = 61/489 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    ++    G      D  +         +I  + +   +          S 
Sbjct: 74  VTTPKGFKEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCGSNWAWAMYPGLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +      +  + +  K+ S  +  T             + LTE   G+D+  I +
Sbjct: 134 GAMRTIEHHGAEQQKQKFLTKLISGVWTGT-------------MCLTESHAGSDLGLIRT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE-- 263
           + +   DG Y ++G K F+S+   D       I+LA++         +  F+VP+     
Sbjct: 181 KAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSD 240

Query: 264 DG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           DG     N +    +++K+G   NAT  L F    G+L+G  N     +        + +
Sbjct: 241 DGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGT 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
           A+  ++   +S   A+ YA+ R                  +I  P ++  +         
Sbjct: 301 AVQGLAASEISFQGALSYAKERLAMRSLSGPQYPEKNADPIIVHPAVRSMLMTQKAFSEG 360

Query: 369 ATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             AL++ LA   D      + + +         + PI K +  +         ++  GG 
Sbjct: 361 GRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS- 479
           G+I E  + +  R++  +++  G+     LD+L   +L+    L + +   ++Q +G   
Sbjct: 421 GFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLMDQFIGQQQ 480

Query: 480 --------GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
                    +K+  + +  +SL K     A+   E+I    +A+  Y    + +   +L 
Sbjct: 481 SSGTLKSYQEKLAELKQQWLSLTKMIAEKAKHNPEEI---GAASVDYLYFSSYVVFAYLW 537

Query: 532 NRFLDNCHS 540
            R     H 
Sbjct: 538 ARMAQVAHE 546


>gi|167563609|ref|ZP_02356525.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 596

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 172/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKEAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L     +  G  + + +   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTVRDGGAVAKAIVGEIRQTVEALGA 478

Query: 479 SGKKVITILRDSIS 492
                   ++  ++
Sbjct: 479 HDGPAFAAMKTQLA 492


>gi|261753219|ref|ZP_05996928.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|261742972|gb|EEY30898.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 320

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 125/319 (39%), Gaps = 25/319 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ + +   +  + +  T    +++ P++ S E             +     LTE   G+
Sbjct: 21  YIGTNNGIGSIGILIDGTDEQKRNYLPRLASGE-------------LLSSFCLTEPDAGS 67

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPN 268
           D A++ +   +  D       +++  ++P++D F ++A+      G   +   + + +  
Sbjct: 68  DAASLKTTAVRDGDFYILNGTNRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSP 127

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMS 324
           GL   +   K+G +   T ++ F N        +      G    MK+L    L  A +S
Sbjct: 128 GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALS 187

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                  LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  +
Sbjct: 188 TGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQ 247

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+     I  
Sbjct: 248 NVSTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYE 300

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   + +   
Sbjct: 301 GTTQIQQIVIARNMIREAR 319


>gi|167629183|ref|YP_001679682.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167591923|gb|ABZ83671.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 380

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 144/381 (37%), Gaps = 35/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
              E  D+    P     + +    GL        +        ++ +    L  +    
Sbjct: 26  AAAEGVDREHRFP--RETIAKMGELGLLGLTIPEEYGGSGGDYLSYVLMIEELAKVCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +   +  + + +A   T    + +              AP+    +     LTE   
Sbjct: 84  AVIVAVHTGLACTSIACFGTEAQREKYL-------------APLAAGEIIGAYALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
           G+D A++T          + L+G+K F+++   +  FI   + +    G   +  L+ + 
Sbjct: 131 GSDAASLTLMASDEG-EYWRLNGNKVFITNASEAGLFITFVRTDPASRGAEGITCLIVER 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMS 324
              G+   R   K+G   + T EL F N    L+   NV     +  K+ + L D   ++
Sbjct: 190 DTPGMTVSRPVEKMGLNGSVTCELHFDNA---LVPKENVLGDVGQGFKVAMQLLDGGRIA 246

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +AE     A+ Y R+R   G  +     ++  +AD+A ++ AA  L +R A  
Sbjct: 247 IAAQGLGIAEGALEYALRYIRQREQFGRPIAANQGIQWMVADLATEVDAARLLVYRAAWL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K   +EAA A+        +    A  V ++ ++ +GG GY  E  + R+ R++  
Sbjct: 307 KTMGKPHGKEAAMAKK-------FATDTAMRVTSDCVQLLGGYGYTREYPVERYMRDAKV 359

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L +
Sbjct: 360 TQIYEGTNQVQQMVIARHLLR 380


>gi|23014717|ref|ZP_00054520.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 546

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/459 (19%), Positives = 170/459 (37%), Gaps = 55/459 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P W       +  G +   +   +  +            ++  A +        + 
Sbjct: 72  VRTTPGWKEAWNTIVEGGWNGLPFSPDYGGMGLPNLFNHAVHEMWQAANMAFTLNPMLTQ 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + + ++L  +      + PK+ + E+  T             + LTE + G+D+AAI S
Sbjct: 132 GAVNALSLYGSEEQKAYYLPKMVTGEWTGT-------------MNLTEPQAGSDLAAIRS 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDG 265
           +     D  + LSG K F++    D       ++LA++         +  F+VP++L DG
Sbjct: 179 KAVPDGD-KFRLSGQKIFITYGDHDLADNIVHLVLARLPDAPAGVKGISLFVVPKILPDG 237

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           S N L    L++K+G   + T  + F +     G L+G  +     +  M     L   +
Sbjct: 238 SRNDLKCVSLEHKLGIHGSPTAVMSFGDHEGALGELVGQPHRGLEYMFVMMNHARLAVGL 297

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVMKRAIADIALDIAAATAL 372
             ++    +  +A +YAR R   G            ++  P ++R +  +   I A   +
Sbjct: 298 QGLAIAERAYQQARNYARDRVQ-GKPAGWTGSGSAGIVHHPDVRRLLMTMKSGIEAMRGI 356

Query: 373 SFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  A S D A    E  A          + PI K WC ++   + +  ++  GG GYIE
Sbjct: 357 HYTAAASADIAHHHPEPNARYEANQRLEFLTPIAKGWCTELGQHIASLGVQVHGGMGYIE 416

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           E   A+H R++   +I  G+       L    +L         + + +           I
Sbjct: 417 ETGAAQHLRDARITTIYEGTTAIQANDLIGRKILRDKGAFARTMLAEIAGLAVELSASPI 476

Query: 485 TILRDSISLCKEDKGLARFLTEKIA--------LASSAA 515
           T L  + +   E    A    + +         LA++AA
Sbjct: 477 TALAATGNRLSEGAAAAARTVDWLVNHAAEDPRLAAAAA 515


>gi|237713780|ref|ZP_04544261.1| acyl-CoA dehydrogenase [Bacteroides sp. D1]
 gi|262409314|ref|ZP_06085857.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644960|ref|ZP_06722694.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294805964|ref|ZP_06764831.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229446227|gb|EEO52018.1| acyl-CoA dehydrogenase [Bacteroides sp. D1]
 gi|262352766|gb|EEZ01863.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639681|gb|EFF57965.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294446846|gb|EFG15446.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 568

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/446 (20%), Positives = 169/446 (37%), Gaps = 47/446 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRKFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I   E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNSDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      DG + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +   + F T+      + L S  KK+      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIA 509
           S +  KE +        AR L E  A
Sbjct: 489 STNAVKEVQDQELLDFTARKLVEMAA 514


>gi|239828253|ref|YP_002950877.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239808546|gb|ACS25611.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 594

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 88/447 (19%), Positives = 165/447 (36%), Gaps = 60/447 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +      A     A   +    +     +  + L
Sbjct: 66  KLLRKAGELGLLSADIPEEYGGLGLDKISSALIAEKMARAGGFSISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKRKYLPALATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNAGFADVFVVYAKVDGEH----FSAFIVERDFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  V  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENLLGEVGKGHVIAFNILNIGRYKLGVGAVGGAKRALEITLQYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + A  +  +R    FDE             K  +
Sbjct: 289 NQRQQFKQPISKFTLTQEKFATMASRLYATESSVYRTVGLFDERMSLLDEEKAKDGKEIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  +    ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATETLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L LL+K   L E+L     +++G               + +
Sbjct: 409 EINRLLVPGMYLKKAMKGELPLLQKAQQLQEELMMLAPEEVGD-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAGM 522
           ++K L R   +KIAL ++  A  + G 
Sbjct: 456 QEKYLVRN-AKKIALMTAGLAAQKFGP 481


>gi|304313042|ref|YP_003812640.1| Acyl-CoA dehydrogenase, probably Isovaleryl-CoA dehydrogenase
           [gamma proteobacterium HdN1]
 gi|301798775|emb|CBL47008.1| Acyl-CoA dehydrogenase, probably Isovaleryl-CoA dehydrogenase
           [gamma proteobacterium HdN1]
          Length = 389

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 142/382 (37%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + DK    P  + L ++    GL        +    +   AH +    +   +   
Sbjct: 33  PIAAQVDKENDFP--NPLWKKFGDMGLLGMTVSEEYGGTDMGYLAHALVLEEISRASAAI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHRNGTDAQKSRYLPKLVSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P ++ +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLRADKKGDRFILNGNKMWITNGPDANTYVIYAKTDIEKGPHGITAFIVERDF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +       + NV     E +K+L+  LD   + +S
Sbjct: 198 PGFSRPQKLDKLGMRGSNTGELVFQDCEVP---EENVLGKVNEGVKVLMSGLDYERVLLS 254

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M   L   I Y   R   G  + +  +++  IAD+     A+ A  + +A + D
Sbjct: 255 GGPTGVMLACLDVVIPYVHERKQFGQAIGEFQLIQGKIADMYAVTNASRAYLYAVAQACD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  + A     +A++ +GG+GYI E    R  R++    
Sbjct: 315 RGETTRKDAA-------ALILYAAENATRCALDAIQVLGGNGYINEYPTGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L + T 
Sbjct: 368 IGAGTSEIRRMLIGRELFRETR 389


>gi|91093605|ref|XP_966609.1| PREDICTED: similar to GA17761-PA isoform 1 [Tribolium castaneum]
 gi|270015758|gb|EFA12206.1| hypothetical protein TcasGA2_TC005122 [Tribolium castaneum]
          Length = 423

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 69/405 (17%), Positives = 139/405 (34%), Gaps = 42/405 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  T   LA+      P +      G   D +               +GL     D 
Sbjct: 50  ELAMKETVARLAQ--EQIAPHVREMDNEGRFKDSIV---------EMLFSNGLMGIQIDP 98

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +          +             G L+   +   A+++         K + P++   
Sbjct: 99  DYGGAGCNFMTTVLTVEELSKVDPSLGILVDLQNTLIANVIIRFGNEEQKKTYLPRL--- 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                       T+      LTE   G+D  A+ +  +K            W  +S ++ 
Sbjct: 156 -----------ATNTVSSFALTEPSSGSDAFALKTIAKKDGSDYIINGSKMWISNSDLAG 204

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++LA  +   G   +   + +    G    + + K+G  ++ T  L F N        
Sbjct: 205 VFLVLANADPSKGYKGITCFIVERDTPGFTVAKPEKKLGIAASGTCMLTFDNVRVPESA- 263

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVM 355
             +     +  K+ I  L+   + +    + LA+        Y   R   G  +     M
Sbjct: 264 --ILGEFGKGYKLAIETLNEGRIGIGAQMIGLAQGCFDATIPYTMERMQFGKPVFSFQGM 321

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA +A +I AA  + +  A   +  ++ ++EAA A+        +  ++A     + 
Sbjct: 322 QHQIAQVATEIEAARLMVYNAARILESGQNYTKEAAMAKW-------YAAEIAQRACIKC 374

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +GG G+ ++    + YR+    SI  G+ N  +  +  L+EK
Sbjct: 375 IDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYNIHLSTIAKLIEK 419


>gi|91779709|ref|YP_554917.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692369|gb|ABE35567.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 595

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/472 (19%), Positives = 187/472 (39%), Gaps = 65/472 (13%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWD 121
              +E A++ +     L      G+R      D V    P +    R+    G       
Sbjct: 38  AVLEESAKLCSE---VLAPLNVEGDRNPSSWKDGVVTATPGFSEAFRQFGEGGWQGVQHP 94

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIF 179
             +E     +   I  A + ++        + P +T  ++ AL+T  +    + + P++ 
Sbjct: 95  VHYEGQGLPK--LIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPRLI 152

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE + G+D+A + ++ +   DG + L G K F++   
Sbjct: 153 SGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGE 199

Query: 240 SDA-----FIMLAQVE------GRVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRS 283
            D       ++LA+          +  F+VP+ L +        N +    +++K+G ++
Sbjct: 200 HDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNKDGSLGERNDVHCVSIEHKLGIKA 259

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  L+F +     G L+G+ N     +  M         +  V     +  +A+ YA+
Sbjct: 260 SPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGVGVSDRAYQKAVAYAK 319

Query: 341 RRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            R  S            +I  P ++R +A +     A+ AL++  A   D A   ++EA 
Sbjct: 320 DRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEAT 379

Query: 392 YARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            A   A      PI K W  +++  V +  ++  GG G+IEE   A++YR++    I  G
Sbjct: 380 RAEHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEG 439

Query: 446 SGNAMVLDVLNL--LEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSIS 492
           +      D++    +  G  + + L + +    + LG+        ++  ++
Sbjct: 440 TTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQGPAFASMKKYLA 491


>gi|301168549|emb|CBW28139.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 382

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 136/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+    P    +L ++   GL  +     F          +          L  
Sbjct: 27  PKANEYDESGEMPM--DILTKAWELGLVNTCIPPEFGGTGFTTLDSMIITEALAYGCLGM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +   +AL       K +               P  ++       LTE   G
Sbjct: 85  NTTLMANDLALLPIALGGNEEQKKRFL-------------TPFTESYKIASFCLTEPGNG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSP 267
           +D A + +  ++  D         W  ++  +D F++    +  +    +  ++ +D + 
Sbjct: 132 SDAAGLKTTIKEDGDHYIINGQKMWITNAGYADLFVIYCTTDPELKHKGISCIVLDDKNV 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL     + K+G+RS+ T  + F+N       L+G+L       +          A  +
Sbjct: 192 EGLEIGAKEKKMGHRSSDTRAVTFTNVRIPKENLIGNLGDGWNLAKMTLDHSRPMVAASA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V G + +L  A+ YA+ R      L     ++  +AD+A+ + A+  L  + A   D+ K
Sbjct: 252 VGGAQCALDHAVKYAKERIQFNKPLAGHQAIQMMVADMAMKVEASRLLVHKAAWLLDQGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S +E A+YA       K +       V  +A++  GG GY  E  + +  R++    I  
Sbjct: 312 SNTELASYA-------KAFAADKFMEVATDAVQVFGGYGYSNEYPVEKIMRDAKLIQIYE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   +
Sbjct: 365 GTSQIQRLVIAKEI 378


>gi|315126581|ref|YP_004068584.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913]
 gi|315015095|gb|ADT68433.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913]
          Length = 385

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 143/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q  A+ A           P   +WD+    P     ++ +   G        
Sbjct: 2   DFNLSEDQQAFAQTARQFAE--SELAPHAAKWDREHIFP--KDTIKAAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M       +++    +  M+A   T  V + +  ++   E
Sbjct: 58  EAGGLGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMIASFATDIVKEQYVEQLVMGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                        +     LTE   G+D A++ ++  +  D  Y ++G K F+S    ++
Sbjct: 118 -------------LLASYCLTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             +++A+  G  G   +   +     +G+ Y + + K+G  +  T  + F +       L
Sbjct: 164 ILVVMART-GADGPGGISAFVVPADASGVEYGKAEEKMGWNAQPTRLISFEDVRIPAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++ A  S+   + +L  A  Y + R   G  L     ++  
Sbjct: 223 LGQEGEGFKFAMQGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+  ++ AA  +    A   D   S             + K +   +   V  +A++ 
Sbjct: 283 IADMNTELVAARQMVRLAAFKLDTNDSEK------TTYCAMAKRFATDVGFTVCNDALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH R+   + IL G+   M + +   +
Sbjct: 337 HGGYGYIKEYPLERHVRDVRVHQILEGTNEIMRVIIARRI 376


>gi|330874800|gb|EGH08949.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 601

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 90/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTKAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KSADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++G+  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEGVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGELTLKVGMAAMKD 512


>gi|167748220|ref|ZP_02420347.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662]
 gi|317472255|ref|ZP_07931583.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167652212|gb|EDR96341.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662]
 gi|316900212|gb|EFV22198.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 379

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 139/372 (37%), Gaps = 30/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLM 152
           D+    P       +    GL    + + +          + A      + + +   + +
Sbjct: 32  DEEGKFPE--KAYAKMGQMGLIGLPFPKEYGGQGADYLSYVLAVEEISKVNSSVGIAYSV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+ S  ++    +  + K + P + S                     LTE   G+D A
Sbjct: 90  CTSLFSGGLI-NSASEELKKKYLPDVLSG-------------KKMGAFCLTEPEAGSDAA 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
              +      +  Y L+G K F+++  ++D F++ A  +       +   + + +  G+ 
Sbjct: 136 GCKTTALWDGEA-YVLNGLKCFITNGPLADYFLVFALTDPEKKTKGLSAFVVEKAMPGVS 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
              ++NK G RS    E+ F N        +     G    MK L    +  A   +   
Sbjct: 195 VGTIENKCGIRSAQVSEIIFENVRVPKENMVGEEGKGFAVAMKDLDGGRIGVAAQGLGIA 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +   A+ Y + R   G  L     +   +A++++ I  A  + ++ A    E +S S 
Sbjct: 255 KGAYDIALQYLKDRQQFGKPLCKNQYLAFKMAELSVQIEQAQYMLYKAAMDKQEGRSYSI 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            AA A+++       C   A  V  EA++ +GG+GY++E  + R  R++    I  G+  
Sbjct: 315 SAAKAKMV-------CTDAAMQVSQEAVQMLGGNGYMKEYHVERMMRDAKITQIYEGTNE 367

Query: 449 AMVLDVLNLLEK 460
              L +   L +
Sbjct: 368 IQKLVISGSLFR 379


>gi|326385814|ref|ZP_08207443.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209793|gb|EGD60581.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 380

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 132/375 (35%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     +R +   G            +   +                 
Sbjct: 28  PHASGWDERHEFP--RETIRMAAELGFAAIYVSEEAGGIGLGRLEAALIFEALAYGCPTT 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    ++ M+       +   + P +                 +     LTE   G
Sbjct: 86  SAFLSIHNMASWMIDRFGHADLKARYLPGLVGM-------------DLMASYCLTEPGSG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +  ++  D  Y +SG K F+S    +   +     G  G   +  L+ +    
Sbjct: 133 SDAAALRTTARREGDH-YVVSGTKQFISGGGVNDLYVTMVRTGEPGPKGISCLVIERDMP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ +   + K+G  ++ T +L   N    +   +G+                L+    S+
Sbjct: 192 GVSFGAPERKLGWNASPTAQLILDNVQVPVANRVGEEGEGFRFAMAGLDGGRLNIGACSL 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G +  L EAI Y + R   G  + +    +  +AD+A D+ ++ AL +  A        
Sbjct: 252 GGAQRCLDEAIAYVKSRSQFGRTIAEFQNTQFQLADMATDLESSRALLYLAAAKV----- 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S +A      + + K        +++  A++  GG GY+++  I R +R+   + IL G
Sbjct: 307 -SADAPDKTRFSAMAKKLATDNGSSIVDRALQLFGGYGYLKDYPIERFWRDLRVHRILEG 365

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + V   L K
Sbjct: 366 TNEVMRMIVGRELLK 380


>gi|312963450|ref|ZP_07777932.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311282256|gb|EFQ60855.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 601

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 181/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDIEGCTWSESGVKTPAGFKEAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    L++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADGSIGERNAVSCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   +     + YAR R  
Sbjct: 264 ATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + +++
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGTDDEAK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +       M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KQADGLLAFMTPIAKAFMTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   ++ G   +      ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQANEGNDAVKEFVAPLAALNKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|29833461|ref|NP_828095.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610584|dbj|BAC74630.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 390

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 24/341 (7%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  +    +     ++A      A+L  G  +S    +   +A   T     +  P +
Sbjct: 63  PYDSEYGGGDQPYEVYLQALEELAAARLTVGLGVSVHTLACHALAQYGTKEQQVEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPSSGSDAASLRTKAVRDGDDWVITGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
           ++D + ++A+  G  G   +   L  G   GL     + K+G + + T ++ F       
Sbjct: 170 IADFYTVMARTGGE-GARGITAFLVPGDAEGLHAALPEKKMGMKGSPTAQVHFDGVRVSD 228

Query: 297 -FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +GD                L  A  +V   + +L EA+ YA  R   G  + D   +
Sbjct: 229 ERRIGDEGQGFAIALSALDSGRLGIAACAVGVAQAALDEAVAYATGRQQFGRPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D  +  S++AA A+++       C   A  V  +A
Sbjct: 289 RFMLADMATQIEAGRALYLAAARLRDAGRPFSKQAAMAKLL-------CTDAAMKVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++ +GG GY  +  + R+ RE+    I+ G+     + +  
Sbjct: 342 VQVLGGYGYTADFPVERYMREAKVLQIVEGTNQIQRMVIAR 382


>gi|83748534|ref|ZP_00945555.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207742117|ref|YP_002258509.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83724838|gb|EAP71995.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206593505|emb|CAQ60432.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 69/396 (17%), Positives = 141/396 (35%), Gaps = 24/396 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q     P  E  D+ +  P  AW  +    +   L  ++ +    
Sbjct: 12  GEDIEMLRSAVRDWAQAE-LAPRAEAIDRSDQFPMDAWKQMGDLGV---LGITVAEEYGG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH I    +   +        + S    + +    TP     + PK+ S ++  
Sbjct: 68  ANMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKARYLPKLVSGDW-- 125

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + ++  D         W  + P  D  ++
Sbjct: 126 -----------VGALAMSEPNAGSDVVSMKLRAERRGDRYVLNGTKMWITNGPDCDVLVV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             + E  +G   +   + +    G    +  +K+G R + T EL F N    +   L   
Sbjct: 175 YGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPVENVLGEE 234

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G    +   +  + A++S   +  M+  +     Y   R   G  + +  +++  IAD+
Sbjct: 235 NGGTRVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A  A  + +  + D      E     R        +  + A  +  EA++ +GG+
Sbjct: 295 YTTLQACRAYLYTVGKNLDA--LGREHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGN 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R +R++    I  G+     + +   L
Sbjct: 353 GYINEFPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|328783450|ref|XP_393211.4| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 414

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 140/394 (35%), Gaps = 22/394 (5%)

Query: 78  NYNTPQLHAYGPGG-------ERWDKVEFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVR 129
           N+N   L  +            +  K E  P    + + S I +GL   +++     +  
Sbjct: 29  NHNPGPLSQFTDEEILMKESVNKLAKEEIAPLVRKMEKESKIDEGLIRKLFENGLMGIEI 88

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
            + +   +   ++   L    +     + A+++ +  T     +   K  + E       
Sbjct: 89  PEKYG-GSGCNFMTTILSVEEVAKVDGSVAALIDIHNT---LVNSLIKKVATEEQKKRYL 144

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P      A    LTE   G+D  ++ +  +K            W  +S +++ F++ A  
Sbjct: 145 PRLAQDYAGSFCLTEPGSGSDAFSLKTIAKKDGSDYVISGTKMWISNSDIAELFLVFANA 204

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVST 306
               G   +     +    GL   + ++K+G +++ T  + F N        LG      
Sbjct: 205 NPSAGYRGITTFFVERDTPGLTIAKPEDKLGIKASGTCMIHFDNVRVPEDNILGHFGHGY 264

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +      +   +  L   I Y   R   G  +     M+  IA +  ++
Sbjct: 265 KYAAGFLNEGRIGIGAQMIGIAQGCLDATIPYTLERKQFGKDIFSFQSMQHQIAQVVTEL 324

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A  L +  A   D  K   +EAA A+ +A        + A  V A+ ++ +GG G+  
Sbjct: 325 ESARLLVYNAARLVDIKKDVMKEAAMAKFVA-------SETALRVTAKCIDFMGGVGFTT 377

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +    +++R+S   +I  G+ N  +  +   + K
Sbjct: 378 DFPQEKYFRDSKIGTIYEGTSNMQLSTIAKCIRK 411


>gi|187924959|ref|YP_001896601.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187716153|gb|ACD17377.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 596

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/502 (20%), Positives = 193/502 (38%), Gaps = 70/502 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-H 100
           IA  P      LE           +E A++       L      G+R      D V    
Sbjct: 23  IATLPGFEDANLE-----TAQAVLEESAKLCGS---VLAPLNVEGDRNPSSWKDGVVTAT 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +    R+    G         +E     +   I    + ++        + P +T  +
Sbjct: 75  PGFREAFRQFGEGGWQGVQHPVDYEGQGLPK--LIATPCVEMLNASNLSFALCPLLTDGA 132

Query: 161 MVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           + AL+T  T    + + PK+ S E+  T             + LTE + G+D+A + ++ 
Sbjct: 133 IEALLTAGTEAQKQTYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE------GRVGCFLVPRLLED--- 264
           +   DG + L G K F++    D       ++LA+          +  F+VP+ L +   
Sbjct: 180 EPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
             G  N +    +++K+G +++ T  L+F +     G L+G+ N     +  M       
Sbjct: 240 SLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFA 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAAT 370
             +  V     +  +A+ YA+ R  S            +I  P ++R ++ +     A+ 
Sbjct: 300 VGMQGVGISDRAYQKAVAYAKDRVQSRPVDGSAKQSVAIIQHPDVRRMLSTMRGLTEASR 359

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL++  A   D A    +EA  A   A      PI K W  +++  V +  ++  GG G+
Sbjct: 360 ALAYVAAAHCDIAHRHPDEAKRAEHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGF 419

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLE---QDLGSS 479
           IEE   A++YR++    I  G+      D++    +  G  + + L + +    + LG+ 
Sbjct: 420 IEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETIEALGAQ 479

Query: 480 GKKVITILRDSISLCKEDKGLA 501
                  ++  ++   +  G A
Sbjct: 480 QGPAFDSMKKYLAQGHQSLGAA 501


>gi|289670333|ref|ZP_06491408.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 131/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 35  PHAAQWDAEGHFP--REAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +   +A   T  V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMATWFIASYGTDAVRAHWGEAMTSG-------------AKLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   +      
Sbjct: 140 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S+
Sbjct: 199 GITYGRKEEKMGWNSQPTRGVTFENVRIPAENLLGKECEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|254702633|ref|ZP_05164461.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 326

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 125/319 (39%), Gaps = 25/319 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ + +   +  + +  T    +++ P++ S E             +     LTE   G+
Sbjct: 27  YIGTNNGIGSIGILIDGTDEQKRNYLPRLASGE-------------LLSSFCLTEPDAGS 73

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPN 268
           D A++ +   +  D       +++  ++P++D F ++A+      G   +   + + +  
Sbjct: 74  DAASLKTTAVRDGDFYILNGTNRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSP 133

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMS 324
           GL   +   K+G +   T ++ F N        +      G    MK+L    L  A +S
Sbjct: 134 GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALS 193

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                  LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  +
Sbjct: 194 TGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQ 253

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+     I  
Sbjct: 254 NVSTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYE 306

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   + +   
Sbjct: 307 GTTQIQQIVIARNMIREAR 325


>gi|46198844|ref|YP_004511.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|55980861|ref|YP_144158.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|46196467|gb|AAS80884.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|55772274|dbj|BAD70715.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 577

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 90/484 (18%), Positives = 177/484 (36%), Gaps = 58/484 (11%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+R++   GL        +  +   +      A     +   +    + +      +   
Sbjct: 65  LMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEELSGSGGFSVTYGAHTSIGTLPLVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ S E+                  LTE   G+D  A  ++     DG 
Sbjct: 125 GTEEQKRKYLPKLASGEW-------------IAAYCLTEPGSGSDALAAKTRATLSEDGK 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  ++  +  F + A+V+G          L +    GL +   + K+G ++
Sbjct: 172 HYILNGVKQWISNAGFAHLFTVFAKVDGEH----FTAFLVERDTPGLSFGPEEKKMGIKA 227

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +    +   LG++        ++  +        +V G + +L  +  YA 
Sbjct: 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAT 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--EAAYARIM-- 396
           +R   G  +    ++++ + ++A  I AA +  +R     DEA    +  EA  A I   
Sbjct: 288 QRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEY 347

Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++   V+ E ++  GG GY +E  I R YR++  N I  G+     L 
Sbjct: 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLL 407

Query: 454 V----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +    L    KG     Q    L+++L          L  S    ++ +       +K+A
Sbjct: 408 IPGMLLRRALKGQLPLMQAAQRLQKEL----------LEPSFEEPEDLELHQVQNLKKLA 457

Query: 510 LASSAAALYRAG---------MNDIADVFLENRFLD----NCHSTHCMLH--GRFNAAHI 554
           L  +  A+ + G         +  +AD+ ++    +           +     R   A  
Sbjct: 458 LMVAGLAVQKYGQGVEEEQEVLGAVADILIDAYAAESALLRARRLGGLAPVLARIYLAQA 517

Query: 555 IDSL 558
           +D  
Sbjct: 518 LDRA 521


>gi|206564033|ref|YP_002234796.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198040073|emb|CAR56054.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 377

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 137/395 (34%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EMLAPNAAQWDHDAHLPD--AIVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
            A M    V     LTE   G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 112 -ADMAAGRVIGAFCLTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVS 305
           A  +   G   +   L      G    + + K+G R++ T  + F N        L N  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENCAIPEDNLLGNRG 229

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    +  L    +  A  ++   R +  +A  YA  R   G  + +   +++ +AD+A
Sbjct: 230 EGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  L    A           E       A   K +  +MA  V ++A++  GG G
Sbjct: 290 VQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + RHYR++    I  G+     + +   L
Sbjct: 343 YLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|297195580|ref|ZP_06912978.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721403|gb|EDY65311.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 390

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 126/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  F    +     ++       A+L  G  +S    S   +A   T     +  P +
Sbjct: 63  PYDSEFGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLSCHALAGYGTKEQQGEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPASGSDAASLRTKAVRDGDDWVVTGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           ++D + +LA+  G  G   +   L  G   GL     + K+G + + T +L F       
Sbjct: 170 VADFYTVLART-GVEGPRGITAFLVPGDAPGLNPAVPEKKMGMKGSPTAQLHFDGVRIPD 228

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+                L  A  ++   + +L EA+ YA  R   G  + D   +
Sbjct: 229 SRRIGEEGQGFAIALSALDSGRLGIAACAIGVAQAALDEALGYATGRKQFGRPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D  +  S +AA A       K +C   A +V  +A
Sbjct: 289 RFMLADMATRIEAGRALYLAAARLRDAGRPFSRQAAMA-------KLFCTDAAMSVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY ++  + R  RE+    I+ G+     + +   L
Sbjct: 342 VQVLGGYGYTQDFPVERFMREAKVLQIVEGTNQIQRMVIARHL 384


>gi|328949605|ref|YP_004366940.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328449929|gb|AEB10830.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 143/377 (37%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLE 147
           PG    D+    P  H ++R     G+  +     +           R    +  +    
Sbjct: 34  PGAAERDRTGTFP--HEIVRELGQLGVMGAQVPEQYGGAGLSTRVFARIVEEIGAVDGSL 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + L    +  + + PK+ S E                  GLTE   
Sbjct: 92  GLTVASHNSLCIGHLLLAANEQQKQAYLPKLASGE-------------ALGAWGLTEPGS 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLED 264
           G+D A + ++ ++ +DG       ++     ++  +++ A+ +          +   +  
Sbjct: 139 GSDAAGMRTRAEETADGWVLNGTKQFITQGSVAGVYVINARTDPAPEGKKHLGISAFVFP 198

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               GL   R + K+G  S+ T +L F +        +     G  + +++L    +  A
Sbjct: 199 AGTPGLKIGRKEEKLGLTSSDTAQLVFEDLKLPKDALVGERGKGFYDVLRVLDGGRIGIA 258

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   R +L  A  YA  R   G  + +   +   +A++A  + AA  L  + A   D
Sbjct: 259 ALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEMATALEAARLLYLKAAELKD 318

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  + EAA A       K +  ++A     EA++ +GG GYI+E  + R++R++    
Sbjct: 319 AGKPFTMEAAQA-------KLFASEVAVKACDEAIQILGGYGYIKEYPVERYWRDARLMR 371

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   + + +   L
Sbjct: 372 IGEGTSEILKIVISRNL 388


>gi|262196551|ref|YP_003267760.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079898|gb|ACY15867.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 381

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 139/395 (35%), Gaps = 27/395 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S   Q L + A   T       P   ++D+    P    +L+R+   GL        +  
Sbjct: 8   SEEQQALIQTARDFTK--KEITPVAAKYDESGEFP--RDVLKRAWDTGLLNIEVPEEYGG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                  L     ++ ++  A  V +  T    K +  ++        
Sbjct: 64  LGGSCLDHSLVLEEVSYGCLGFNTSLAANMLGAMPVIIAGTDEQKKKYLTRLT------- 116

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +      +E   G+D+A ++++ +K  D        +W  +  ++  + +L
Sbjct: 117 ------EEPIFAAYCCSEPDAGSDVAGLSTRVEKHGDDYVINGQKRWITNGGVASWYTVL 170

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A  +       +   + D    G+   R ++K+G R++ T ++ F +       L+G  N
Sbjct: 171 ATFDKSQRHKGIACFVVDADTPGVKTGRKEDKMGQRASNTTDVIFEDVKVPKSALIGPEN 230

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                            A  +   +R +L E+  YA  R   G  +     ++  IAD+ 
Sbjct: 231 GGFKVAMKTFDRSRPWIAAGAAGVIRRALDESRAYALERKTFGTPIAQHQAIQFMIADMG 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +       L  + A + D  +  S  +AYA       K +    A  V  +A++  GG G
Sbjct: 291 IAYENTRMLCHKAAWNVDRGELDSVVSAYA-------KAYGADAAMRVTTDAVQVFGGYG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y +E  + +  R++    I  G+     + +   L
Sbjct: 344 YTKEYPVEKLMRDTKLLQIYEGTSQIQRVVIARNL 378


>gi|68536565|ref|YP_251270.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577708|ref|ZP_05845643.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264164|emb|CAI37652.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604103|gb|EEW17345.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 387

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 137/370 (37%), Gaps = 25/370 (6%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
             E H        ++   GL C+     +       AH+    +   +A   A H    S
Sbjct: 37  WEENHQVEREFWNKAGDAGLLCASIPEEYGGGGGTFAHEAVIQQELALAGNSAWHNGVHS 96

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V  A  +  + T    K W P + S E             +   + +TE   G+D+ AI 
Sbjct: 97  VIVAHYIYQLGTEEQRKRWLPGMASGE-------------LVGAIAMTEPGTGSDLQAIK 143

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQR 274
           ++ +   D         +  +    D  +++A+   + G   +  ++ E     G    R
Sbjct: 144 TRAELDGDEWVINGSKTFITNGTHCDVVVIVARTNDQPGGRGLSLIVAETQDLEGFERGR 203

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           + +KIG R   T EL F++        L      G V+ M+ L    L  AI   S    
Sbjct: 204 VLDKIGQRGQDTRELFFTDMRVPADNLLGGQEGMGFVQLMQQLPQERLILAIGGSSACEG 263

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++ E I Y   R   G  ++     +  +A+ A +  AA  L+        E K  + +A
Sbjct: 264 AVRETIRYVNEREAFGRPILGFQNTQFVLAECASETLAAKTLTDHCTALHIEGKLTTAQA 323

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+ +A         +  +V    ++  GG G++ E  I+R Y ++    I  G+   M
Sbjct: 324 SAAKYLA-------SDLQSSVADRCLQLFGGYGFMREYPISRMYTDARVQRIYGGTNEIM 376

Query: 451 VLDVLNLLEK 460
            L +    ++
Sbjct: 377 KLLIAREFKQ 386


>gi|311068395|ref|YP_003973318.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus
           1942]
 gi|310868912|gb|ADP32387.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus
           1942]
          Length = 380

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 145/380 (38%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D++   P       +    GL    +   +                Y +A  E 
Sbjct: 26  PQAEYVDRMGEFPV--QTFNKMGELGLLGIPFPEEYGGSGGDTIS-------YALAVEEI 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +  S  ++ A+ V+L  +P           + +    +  P+         GLTE   
Sbjct: 77  GKVCGSTGLSYAAAVSLGASP------LYYFGTEKQKQEHLVPLASGKALGSFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D     ++ ++  D         W  ++  +   I+ A      +G  ++  L+    
Sbjct: 131 GSDAGGTQTKAERKGDEYVINGEKCWITNANYARTVIVTAVTGKNELGKNIISALIVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             GL      +K+G R + T E+   N         N+     +  K  ++ LD   +S+
Sbjct: 191 TAGLTITNPYDKMGVRGSDTAEILLENVRVPA---ENLLGDSSKGFKQFLHTLDGGRISI 247

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V +A+     ++ YA+ R   G  +     ++  +AD+A++I  A  +  + A   
Sbjct: 248 AALAVGIAQGALDASLSYAKERKQFGQSISSFQAIQFKLADMAMEIDLARQMVIKAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++E+A+A       K +  +MA     +A++  GGSGY+ E  + R  R++   
Sbjct: 308 DRQRPFTKESAFA-------KLFASEMATRACNQAIQIHGGSGYMREYGVERMLRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 361 EIGEGTSEIQRIVIARQLLK 380


>gi|126665121|ref|ZP_01736104.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17]
 gi|126630491|gb|EBA01106.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17]
          Length = 591

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/530 (18%), Positives = 195/530 (36%), Gaps = 61/530 (11%)

Query: 57  ELELLGE---YVLSCTAQELAR-MANYNTPQLHAYGPGGERWDK----VEFHPAWHALLR 108
           ELE   +    ++S    E  +  A    P   A    G  +D     V    A+    +
Sbjct: 25  ELEKYADATPDLISAVIDEAGKVAAEVIQPTNQAGDREGCHYDPETHAVTTPEAFKPAYK 84

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MT 166
           + +  G         F        H ++     ++        M P +T  ++ AL    
Sbjct: 85  KFVEGGWTALDAPVEFGGQGLP--HTLKFVVDEMVCSTNLSLGMYPGLTHGAISALYAHG 142

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + +  K+ S ++  T             + LTE + GTD+  I ++    +DG Y
Sbjct: 143 SDELKQTYLEKLVSGKWTGT-------------MCLTEPQCGTDLGLIRTRATPNADGSY 189

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLED-GSPNGLCYQR 274
            + G K +++    D       ++LA+          +  F+VP++L + G  N      
Sbjct: 190 AIEGTKIWITGGEHDLTDNIVHLVLAKLPGAPDTTKGISLFVVPKVLPESGERNPAFCGG 249

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           L++K+G + +AT  + F    G+L+G+ N     +  M     L   +  +    ++  E
Sbjct: 250 LEHKMGIKGSATCVMNFEGAKGWLVGEPNDGMRAMFTMMNEARLMVGMQGLGLAEMAYQE 309

Query: 335 AIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           ++ +AR R   G               +I  P ++R +    +      A++    +  D
Sbjct: 310 SLGFARERLQ-GRSMSGVKNPDGPADPIIVHPDVRRMLMRQKVLNEGMRAMALFAGHQLD 368

Query: 382 EAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            + +  +EA         +++ P+ K +            ++ +GGSG+  +  + +  R
Sbjct: 369 LSVAHPDEAVRESADDLVQLLTPVVKAFLTDEGSNNTNIGLQVLGGSGFTTDWPLEQLVR 428

Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK-VITILRDSI- 491
           +     I  G+     LD++   L  KG  L   LF  L   L  + +      L+ ++ 
Sbjct: 429 DGRIARIYEGTNGIQALDLVGRKLSLKGGRLVRTLFGVLTSYLKDNPEAPHRDELKGAVS 488

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           SL K    LA    +    A +AA  Y   M      ++ +R  +     
Sbjct: 489 SLEKATLWLATNAPKDPEQAGAAATPYLRLMALTVIGYMWSRMANVAGQQ 538


>gi|70729530|ref|YP_259268.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343829|gb|AAY91435.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 628

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/532 (18%), Positives = 179/532 (33%), Gaps = 63/532 (11%)

Query: 56  KELELLGEYVLSCTAQELARMA-----NYNTPQLHAYGPGGERW--DKVEFHPAWHALLR 108
             L  L + V   TA  +   A     N   P   +    G  W   +V     +     
Sbjct: 64  ARLPALADTVDGDTADAILEEAAKVTGNLIAPLNRSGDEEGASWHAGQVRTPAGFKEAYS 123

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
             I  G      + ++  +   +   ++   +   A        + S  +   +    + 
Sbjct: 124 TYIQGGWVGLSGNPAYGGMGMPKMLAVQFEEMLYAANSSFALYSALSSGACLAIDAHASE 183

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + P             PM +   A  + LTE   GTD+  I ++ +  ++G Y +
Sbjct: 184 ALKQLYLP-------------PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQANGSYRI 230

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP++  D     G+ N +  
Sbjct: 231 SGSKIFITGGEQDLTENIIHLVLAKLPDAPAGPKGISLFLVPKIHVDANGNLGAANAVSC 290

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  L F    G+L+G+ N     +  M     L   I  +     S 
Sbjct: 291 GSIEHKMGIKASATCVLNFDGASGWLIGEANKGLAAMFTMMNYERLSIGIQGIGCAENSY 350

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS------F 374
             A  YAR R  S               +I  P ++R +  +        A +       
Sbjct: 351 QNARTYARERIQSRSPAGPVAKDKIADPIIVHPDVRRMLLTMKAMTEGGRAFASYVGQQL 410

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            LA   D+   R    A   ++ P+ K +             +  GG GYI E    +  
Sbjct: 411 DLAKFADQPHERHNAEALVALLTPVAKAFFTDTGLDSCVLGQQIFGGHGYIREWGQEQLV 470

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R+     I  G+     LD+L   ++  G          +       G      L D++ 
Sbjct: 471 RDVRIAQIYEGTNGIQALDLLGRKVVGNGGVALRLFTGEIRDYAYLPGAAYAAELLDAVQ 530

Query: 493 LCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             ++   L+ +L E+ A       SA   Y      +A  +L  R       
Sbjct: 531 RLED---LSDWLREQAAQNPHAVGSACVEYLQLFGYVAYAYLWARMAQVAEH 579


>gi|308049643|ref|YP_003913209.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307631833|gb|ADN76135.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 586

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/487 (19%), Positives = 181/487 (37%), Gaps = 48/487 (9%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +          G      +  F  +   +   +    +   A        S + 
Sbjct: 73  VTTPKGYKEAYATFAESGWVGLGGEPEFGGMGMPKMLGVLFDEMCYGASNAFALYSSLTA 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A  +A   +  + + + P ++S ++             +  + +TE + G+D+  I +
Sbjct: 133 GAALCIASHGSDELKQRYLPMLYSGQW-------------SGAMDMTEPQAGSDLRHIRT 179

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG------CFLVPRLLED- 264
           +     DG Y +SG K F++    D       ++LA++    G       FLVP+     
Sbjct: 180 KAVPQEDGSYRVSGTKIFITGGDHDLTENVIHLVLAKLPDAPGGSRGLSLFLVPKFEVAD 239

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G PNG+    +++K+G +++AT  + F++  G+L+G +N     +  M     L  
Sbjct: 240 DGSVGGPNGVECGSVEHKMGIKASATCVINFNDAKGYLVGQVNRGLAAMFTMMNYERLSI 299

Query: 321 AIMSVSGMRVSLAEAIHYARRRH----------VSGGILIDQPVMKRAIADIALDIAAAT 370
            I  +         A  YA  R                +I    ++R +  IA    A  
Sbjct: 300 GIQGLGCAEAGYQMARDYALERKQGQGSGQGLGNGADPIIVHGDVRRMLMQIAAMTEAGR 359

Query: 371 ALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           AL+     S D+ K   +  A     ++ P+ K +           A +  GG GY+ E 
Sbjct: 360 ALAVLTGQSLDKQKHLKDAQADDLVGLLVPLAKAFFTDTGLESSVAAQQVFGGHGYVRET 419

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVIT- 485
            + +  R+     I  G+     LD+L   +L +   + + L + +E DL  +G +    
Sbjct: 420 GVEQLVRDVRIAQIYEGTNGIQALDLLGRKVLPRDAAMLKTLIAMVEADLAETGAEWADQ 479

Query: 486 --ILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIADVFLENRFLDNCHSTH 542
             ++R +     +  G  R   E++  A +AAA+ Y   M      +L  + ++      
Sbjct: 480 AQLVRQAFGQLLDAAGEFRS-RERMGDAVNAAAVDYLHAMGYATYGYLWLKMVNAAERDQ 538

Query: 543 CMLHGRF 549
             L G F
Sbjct: 539 ASLDGAF 545


>gi|324326369|gb|ADY21629.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 572

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 142/379 (37%), Gaps = 30/379 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFST 471
            V  +L K     EQ+  T
Sbjct: 404 TVAKMLMKQMEQMEQIEDT 422


>gi|149925586|ref|ZP_01913850.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105]
 gi|149825703|gb|EDM84911.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 136/374 (36%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     DK +  P    L R+    GL     +           AH +    +   +   
Sbjct: 32  PLAAEMDKTDQFPMH--LWRKMGDMGLLGLTVEEELGGSGMGYLAHIVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    K + PK+ S E+                L ++E   
Sbjct: 90  ALSYGAHSNLCVNQIRRNGTDWQRKTFLPKLISGEH-------------IGALAMSEPGA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D  ++ A+ +   G   +   L + + 
Sbjct: 137 GSDVVSMQLRADKKGDKYVLNGNKMWITNGPDADVLVVYAKTDLAAGPHGITAFLIEKNF 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A++S   
Sbjct: 197 KGFSIAQKLDKLGMRGSHTGELVFEDCEVPETHVLGKVGRGVNVLMSGLDFERAVLSGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M  ++   + Y   R   G  + +  +++  +AD+   + A  A  +++  + D  K
Sbjct: 257 LGIMAAAMDVVVPYVHDRKQFGQSIGEFQLIQGKLADMYSTMMATRAYVYQVGKACD--K 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  E     R        +  + A  +  E+++ +GG+GYI E    R +R++    I  
Sbjct: 315 ATPETVRKLRKDCAGAILYSAEKATWMAGESIQILGGNGYINEYPCGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 375 GTSEIRRMLIGREL 388


>gi|188036192|pdb|2Z1Q|A Chain A, Crystal Structure Of Acyl Coa Dehydrogenase
 gi|188036193|pdb|2Z1Q|B Chain B, Crystal Structure Of Acyl Coa Dehydrogenase
          Length = 577

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 90/484 (18%), Positives = 177/484 (36%), Gaps = 58/484 (11%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+R++   GL        +  +   +      A     +   +    + +      +   
Sbjct: 65  LMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEELSGSGGFSVTYGAHTSIGTLPLVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ S E+                  LTE   G+D  A  ++     DG 
Sbjct: 125 GTEEQKRKYLPKLASGEW-------------IAAYCLTEPGSGSDALAAKTRATLSEDGK 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  ++  +  F + A+V+G          L +    GL +   + K+G ++
Sbjct: 172 HYILNGVKQWISNAGFAHLFTVFAKVDGEH----FTAFLVERDTPGLSFGPEEKKMGIKA 227

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +    +   LG++        ++  +        +V G + +L  +  YA 
Sbjct: 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAT 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--EAAYARIM-- 396
           +R   G  +    ++++ + ++A  I AA +  +R     DEA    +  EA  A I   
Sbjct: 288 QRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEY 347

Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++   V+ E ++  GG GY +E  I R YR++  N I  G+     L 
Sbjct: 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLL 407

Query: 454 V----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +    L    KG     Q    L+++L          L  S    ++ +       +K+A
Sbjct: 408 IPGMLLRRALKGQLPLMQAAQRLQKEL----------LEPSFEEPEDLELHQVQNLKKLA 457

Query: 510 LASSAAALYRAG---------MNDIADVFLENRFLD----NCHSTHCMLH--GRFNAAHI 554
           L  +  A+ + G         +  +AD+ ++    +           +     R   A  
Sbjct: 458 LMVAGLAVQKYGQGVEEEQEVLGAVADILIDAYAAESALLRARRLGGLAPVLARIYLAQA 517

Query: 555 IDSL 558
           +D  
Sbjct: 518 LDRA 521


>gi|45656441|ref|YP_000527.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599676|gb|AAS69164.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 571

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/489 (20%), Positives = 190/489 (38%), Gaps = 60/489 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGL 115
           LE +G+              N  +P +      G ++   KVEF P    L+ + I  G+
Sbjct: 56  LETVGDLAG-----------NILSPHVADLDREGLKFKNGKVEFPPKMLELVSKVIEAGV 104

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               + R +  +      K   + ++         +    V  A ++    T ++  DW 
Sbjct: 105 QAYGFSRKYGGLGIPWTVKSFISEIFYRVDASL-AIAIGCVNLAEILERHATEQMKSDWI 163

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P     ++                +GLTE   G+D++ + ++  K  +G + L+G K F+
Sbjct: 164 PHFADGKF-------------VCAMGLTEPDHGSDLSNLRTKATKDKNGNWTLNGTKRFI 210

Query: 236 SSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +            + LA+  E   G   +   L   +   +    ++NK+G   + T E+
Sbjct: 211 THGCGFGDLPAVLLTLARSGEINSGARGLSFFLVQST--DVQIAGIENKLGLHCSPTCEV 268

Query: 290 EFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            F N+ G L+G+           M     +  A  S      +  EA+ YA+ R   G  
Sbjct: 269 VFENSPGLLIGEEGYGLIKYTMGMLNGARMGIAQQSTGLATAAYYEALKYAKERTQFGKT 328

Query: 349 LIDQPVMKRAIADIALDIAAATALS-----------FRLANSFDEAKSRSE--------- 388
           LI+ P +K+ +  I  +  A   L+           +R      +  +  E         
Sbjct: 329 LIEIPAVKKILDQIERETYAMRCLTLEGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRY 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A I+ PI+K++C +     +++A++  GGSGY E+  I+R YR++   +I  G+  
Sbjct: 389 WEKIANILTPISKFYCSESCLKTVSDALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQ 448

Query: 449 AMVLDVLNLLEKG-TNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKE--DKGLARFL 504
             +   +  +  G T+ F +  S L     SS   K+    ++ + L KE  +K +    
Sbjct: 449 IQINACIGGITSGLTHTFGEYVSELISRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIY 508

Query: 505 TEKIALASS 513
            E+I L  S
Sbjct: 509 AEEIVLTCS 517


>gi|254293297|ref|YP_003059320.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041828|gb|ACT58623.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 593

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 95/529 (17%), Positives = 188/529 (35%), Gaps = 64/529 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRSIHD 113
              L E ++     E A+ +      L+      G        V+    +    +     
Sbjct: 30  FSELSEDLVDAILNEGAKFSKEVLHPLNMVGDQQGVIRNADGSVKTPDGFPEAYKAMAEG 89

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVH 171
           G         F        + + +A   +M+       M P +T  +   +    +    
Sbjct: 90  GWTGLSASPEFGGQGLP--YVLDSAISEMMSSANMAFAMYPGLTHGAYSAIVAGGSQEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+  T             + LTE   GTD+  + ++    +DG Y ++G 
Sbjct: 148 ETYVPKMVSGEWSGT-------------MNLTEPHCGTDLGLMKTKAAPQADGTYKITGQ 194

Query: 232 KWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K ++S   +D       ++LA++EG       V  F+VP+ + D     G  N      L
Sbjct: 195 KIWISGGENDFTDNIIHLVLAKIEGAPEGIKGVSLFIVPKFILDENGNPGERNACGCGGL 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + K+G   NAT  + +    G+L+G+ N     +  M     L   +  ++   +S   A
Sbjct: 255 EEKMGIHGNATCVMNYDGATGYLVGEPNKGMRTMFVMMNAARLGVGMQGLAQSEISYQNA 314

Query: 336 IHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSF------RL 376
           + +A+ R   G               +I  P ++R + D       A A S        L
Sbjct: 315 VDFAKDRIQ-GRSVSGVKAPEKAADPVIVHPDVRRMLMDQKAFNEGARAFSLWTSLQNDL 373

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +  ++  +R +   Y  ++ P+ K +          +AM+  GGSG+  E  + +  R+
Sbjct: 374 EHRAEDEATREKAGDYMGLLTPVIKAFLTDKGLKGCIDAMQIHGGSGFTREWGMEQFVRD 433

Query: 437 SPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++   L  KG        + ++  +  +  + + +  D++   
Sbjct: 434 CRIALIYEGTNGVQALDLVGRKLASKGGRAIMTFNAEMDAFIAENDSEDMKLYIDALKTT 493

Query: 495 KEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENRFLDNC 538
           K     A     +  +     A++A+  Y       A  ++  R     
Sbjct: 494 KGQLQEATMWLMQNGMTNPDNAAAASHDYLHIFGYTAFAYMWARMAKAA 542


>gi|24216375|ref|NP_713856.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24197657|gb|AAN50874.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 571

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/489 (20%), Positives = 190/489 (38%), Gaps = 60/489 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGL 115
           LE +G+              N  +P +      G ++   KVEF P    L+ + I  G+
Sbjct: 56  LETVGDLAG-----------NILSPHVADLDREGLKFKNGKVEFPPKMLELVSKVIEAGV 104

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               + R +  +      K   + ++         +    V  A ++    T ++  DW 
Sbjct: 105 QAYGFSRKYGGLGIPWTVKSFISEIFYRVDASL-AIAIGCVNLAEILERHATEQMKSDWI 163

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P     ++                +GLTE   G+D++ + ++  K  +G + L+G K F+
Sbjct: 164 PHFADGKF-------------VCAMGLTEPDHGSDLSNLRTKATKDKNGNWTLNGTKRFI 210

Query: 236 SSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +            + LA+  E   G   +   L   +   +    ++NK+G   + T E+
Sbjct: 211 THGCGFGDLPAVLLTLARSGEINSGARGLSFFLVQST--DVQIAGIENKLGLHCSPTCEV 268

Query: 290 EFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            F N+ G L+G+           M     +  A  S      +  EA+ YA+ R   G  
Sbjct: 269 VFENSPGLLIGEEGYGLIKYTMGMLNGARMGIAQQSTGLATAAYYEALKYAKERTQFGKT 328

Query: 349 LIDQPVMKRAIADIALDIAAATALS-----------FRLANSFDEAKSRSE--------- 388
           LI+ P +K+ +  I  +  A   L+           +R      +  +  E         
Sbjct: 329 LIEIPAVKKILDRIERETYAMRCLTLEGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRY 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A I+ PI+K++C +     +++A++  GGSGY E+  I+R YR++   +I  G+  
Sbjct: 389 WEKIANILTPISKFYCSESCLKTVSDALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQ 448

Query: 449 AMVLDVLNLLEKG-TNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKE--DKGLARFL 504
             +   +  +  G T+ F +  S L     SS   K+    ++ + L KE  +K +    
Sbjct: 449 IQINACIGGITSGLTHTFGEYVSELISRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIY 508

Query: 505 TEKIALASS 513
            E+I L  S
Sbjct: 509 AEEIVLTCS 517


>gi|90021530|ref|YP_527357.1| putative acyl-CoA dehydrogenase [Saccharophagus degradans 2-40]
 gi|89951130|gb|ABD81145.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40]
          Length = 595

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 91/494 (18%), Positives = 181/494 (36%), Gaps = 56/494 (11%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E   + V+    +E A+        L++     G  W D V   P  + A   + +  G 
Sbjct: 32  EDASQDVVEAILEESAKFCENVLAPLNSVGDEQGCTWNDGVVTTPDGFKAAYEQFVEAGW 91

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +      ++     + +   +          S  +   + L  T      + 
Sbjct: 92  PSMTHHTEYGGQGLPESLGTVLSEMTGTSNWAWCMYPGLSHGAMKTLELHGTEEQKSTYL 151

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+    +  T             + LTE   GTD+  + ++ ++  DG Y +SG K F+
Sbjct: 152 TKLVEGAWTGT-------------MCLTEAHCGTDLGMLRTKAEQNEDGSYSISGTKIFI 198

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G       +  F+VP+ L       G  N +    L+ K+
Sbjct: 199 SAGEHDLAENIVHIVLARLPGAPEGTKGISLFIVPKFLPSDDGSVGERNQVACGSLEEKM 258

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + F    G+L+G  N     +        L +A+  ++   +   +++ YA
Sbjct: 259 GIHGNATCVMNFDGAKGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAELGYQKSLAYA 318

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAK 384
           + R                  +I  P ++R +            L + LA   D    A+
Sbjct: 319 KDRIQMRALSGVKNPDGPADPIICHPDVRRMLLTQKAFAEGGRMLIYFLAKQVDIESHAQ 378

Query: 385 SRSEEAA---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +++AA      ++ PI K +  +        A++C GG GYI E    ++ R++  + 
Sbjct: 379 NEADKAAASDMLALLTPIAKAFLTETGFESANLAVQCFGGHGYIREWGAEQNVRDARISM 438

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L   +L     +  +    + +    +     I+   + ++   ++ 
Sbjct: 439 LYEGTTGIQALDLLGRKVLMSQGEVLRKFTKVIHKFCEANKDNAAISEFVEPLAQLNKEW 498

Query: 499 GLARFLTEKIALAS 512
           G    +T  I LA+
Sbjct: 499 GD---VTMHIGLAA 509


>gi|300773424|ref|ZP_07083293.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759595|gb|EFK56422.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 383

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
            WD+ +  P    L R+    G    I    +       Q +      +  +       +
Sbjct: 30  EWDEAQTFPV--ELFRKMGSYGFMGIIVPEEYGGAGLGYQEYITILDEISKVCGSIGLSV 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +    + +         K + PK+ + E+                 GLTE   G+D 
Sbjct: 88  AAHNSLCTNHILSFANEEQKKKYLPKLATAEW-------------IGAWGLTETGSGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGL 270
             +T+  ++  D  + L+G K F++  +S    ++    G+ G        + +    G 
Sbjct: 135 GGLTTVAERDGD-YFILNGSKNFITHAISSEVAVVITRTGQKGDKKGKTAFIIEKGTPGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              + +NK+G R++ T  L F N        +     G V+ +K+L    +  A +S+  
Sbjct: 194 SAGKKENKLGMRASETACLFFDNCRVHKDQIVGEEGQGFVQALKLLDGGRISIAALSLGI 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +   A+ YA  R      + D   +   +A++A  + AA  L+ + A   +     S
Sbjct: 254 ARGAYECALKYANEREQFNQKIFDFQAVGFKLAEMATQVEAAELLTRQAAFLKESGTKSS 313

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           + +A A       K +  + A  V  E+++  GG G+ ++    +++R++   +I  G+ 
Sbjct: 314 KISAMA-------KLYASEAAVEVSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTS 366

Query: 448 NAMVLDVLNLLEK 460
           +   + +   ++K
Sbjct: 367 SIQKMVIAREIQK 379


>gi|222147745|ref|YP_002548702.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221734733|gb|ACM35696.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 591

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 97/511 (18%), Positives = 182/511 (35%), Gaps = 64/511 (12%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHC 117
           L E +     +E  R A      L A     G +    KV+    W  L RR    G + 
Sbjct: 31  LSEDLTDAILEEAGRFAANEIAPLAANGDRQGAKLVDGKVQLPDGWADLYRRWAEGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
            + +  +        H +  A L +      G  + P +T  +  AL    +  + + + 
Sbjct: 91  LVAEERYGGQGLP--HLLNVAALEMWNSGSMGFALGPVLTMGASEALTAHGSEALKEKFL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            ++ S E+                + LTE   G+D+  + ++ ++ +D  Y + G K ++
Sbjct: 149 HRMVSGEWM-------------ASMNLTEPHAGSDLGVMKTRAERQNDSTYRIFGQKIYI 195

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    DA      ++LA++         +  FLVP+ L +     G+ N L    L++K+
Sbjct: 196 TWGEHDATDNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKL 255

Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           G   + T  + F +          G+++G+ N     +  M     L   +  V+    +
Sbjct: 256 GIHGSPTCTMIFGDGRFGDDPGAIGYVIGEENKGLACMFTMMNNARLAVGMQGVAIAEAA 315

Query: 332 LAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
              A  YAR R               +I+ P + R +  +      A A+ +  A++ D 
Sbjct: 316 TQLATAYARERTQGKAPGWTGAGMSPIIEHPDVARTLLTMKALTQGARAICYSCAHAIDM 375

Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E        A A  + PI K +   +   V +  ++  GG G+IEE   AR  R++
Sbjct: 376 SHHSEGDEARHWQARAAFLTPIAKSFATDIGVDVASMGIQVHGGMGFIEETGAARLLRDA 435

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL----GSSGKKVITILRDSI 491
               I  G+       L V  L            S L+        S+           +
Sbjct: 436 RIAPIYEGTNGIQAIDLVVRKLPLAEGAHVRGFLSELKALAVAVDASNRPGFGETATRLL 495

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGM 522
           +  ++ +    +L  ++   +   AL  A  
Sbjct: 496 AAIRDLEDATEYLLARLGEGAQVDALAGATP 526


>gi|221638920|ref|YP_002525182.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
 gi|221159701|gb|ACM00681.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
          Length = 385

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 142/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   R D+    PA   L R     GL        F    +   AH +    +   +   
Sbjct: 31  PMAARIDRENVFPA--ELWREMGELGLLGITVPEEFGGSDMGYLAHTVAVEEVARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  +P     + PK+ S E+                L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIRLNGSPEQKASYLPKLVSGEH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMRLKAEKRNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T EL F N         NV     + +++L+  LD       
Sbjct: 196 TGFSTSPHFDKVGMRGSNTGELIFDNCEVPF---ENVLGQDGKGVRVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    M   L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D
Sbjct: 253 GIGTGIMAACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYEAARACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +AA           +  + A     +A++ +GG+G++ +  ++R +R++    
Sbjct: 313 AGRVTRADAAG-------CVLYASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L  G
Sbjct: 366 IGAGTSEIRRMLIGRELMAG 385


>gi|118472185|ref|YP_885879.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           smegmatis str. MC2 155]
 gi|118173472|gb|ABK74368.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           smegmatis str. MC2 155]
          Length = 395

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 137/377 (36%), Gaps = 28/377 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD     P    +LR +   G+              ++   +R       A
Sbjct: 23  KRITPYALEWDDKHHFPT--DVLREAAELGMGAIYCREDVGGSELRRLDAVRIFEALSAA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A MV    T    K W P++ S E                   LTE
Sbjct: 81  DPTLAAFLSIHNMCAWMVDTYGTEDQRKTWVPRLASME-------------TIASYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  K  D  Y L G K F+S    SD ++++A+  G  G   +   + 
Sbjct: 128 PGAGSDAAALRTRAVKDGDH-YVLDGVKQFISGAGTSDLYVVMARTGGE-GPRGISTFIV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLD 319
           +    GL +   + K+G  +  T ++ F          L        G   +      ++
Sbjct: 186 EKDTPGLSFGADEQKMGWNAQPTAQVIFEGVRVPAEALLGNTEGTGFGIAMNGLNGGRIN 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+ G + +  +A+ Y   R   G  L+D+P ++  +AD+A  +  +  L +R A++
Sbjct: 246 IAACSLGGAQAAYDKAVGYLADRQAFGAALLDEPTIRFTLADMATGLETSRNLLWRAASA 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D              +  + K +       V   A++  GG GY+ E  + +  R+   
Sbjct: 306 LDANHPDK------VTLCAMAKRYVTDTCFDVADSALQLHGGYGYLREYGLEKIVRDLRV 359

Query: 440 NSILLGSGNAMVLDVLN 456
           + IL G+   M + +  
Sbjct: 360 HRILEGTNEIMRVVIGR 376


>gi|33599601|ref|NP_887161.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567197|emb|CAE31111.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 125/355 (35%), Gaps = 26/355 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        F  +    +   +    L   +      L +     +  +    TP  
Sbjct: 46  AMGLFGLTIPERFGGLDLTMEEEVLVVFELCRASPAFRSLLGTTVGIGSQGILFDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E                   LTE   G+D A++ +   K  D       
Sbjct: 106 QEKYLPRLATGEIM-------------ASFALTEPEAGSDAASLRTTAIKDGDAYVVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   V   + D    G+ + +   K+G +   T ++
Sbjct: 153 KRFITNAPHAGMFTLMARTNPADKGAAGVSAFIVDAGTPGISFGKRDRKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N          L    G    MK+L    +  A + V+     L  A+ YA  R   
Sbjct: 213 IFENVRVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVCVAVAERMLDMALRYAAERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD   +I AA ++    A   D+    S E       A   K +  
Sbjct: 273 GQPIGTFQLVQAMLADSKAEIYAARSMVLDAARRRDDKLPNSTE-------ASCAKMFAS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +M   V   A++  GG+GY+ E +I R YR+     I  G+       +   + +
Sbjct: 326 EMCGRVADRAVQIFGGAGYMSEYAIERFYRDVRLFRIYEGTTQIQQTVIARNMLR 380


>gi|319793062|ref|YP_004154702.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315595525|gb|ADU36591.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 384

 Score =  270 bits (691), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 131/402 (32%), Gaps = 33/402 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS      A+ A         + P   +WD     P     + ++   G           
Sbjct: 5   LSEEQNAFAQTARDFA--QAEFAPHAAQWDAEAIFP--KEAIAKAGELGFCGLYAPERVG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +   +                    ++    +  M+    T  V   W   + S     
Sbjct: 61  GLGLPRLDSALVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVAAQWGEDLTSG---- 116

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           LTE   G+D  ++ ++ +          G  +   +  +D  ++
Sbjct: 117 ---------RKLASYCLTEPGAGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVL 167

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +A+  G  G   +          G+ Y + ++K+G  S  T  + F N         N+ 
Sbjct: 168 MART-GGAGASGISAFAVPADAPGVSYGKKEHKMGWNSQPTRTINFDNVRIPA---ENLL 223

Query: 306 TGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               E  +I +       ++ A  SV   + +L  A  Y   R   G  +     ++  +
Sbjct: 224 GKEGEGFRIAMKGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPIASFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A+  D         A A     + K +       V  +A++  
Sbjct: 284 ADMATELVAARQMVRLAASKLDAGH------ADASTYCAMAKRFATDAGFNVCNDALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY+ E  + R  R++  + IL G+   M + V   L +G
Sbjct: 338 GGYGYLSEFPLERLVRDTRVHQILEGTNEIMRVIVARKLLEG 379


>gi|258591366|emb|CBE67665.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 383

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 147/376 (39%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P    ++R+    GL   ++ +++        +   A  L  + + +A
Sbjct: 26  PVAAEIDEQERFPTG--IIRKLSELGLMGILFPKAYGGAGMD--YISYALILEELGRYDA 81

Query: 149 GHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              ++        ++ + L         + P++ S                     +TE 
Sbjct: 82  SVALTVESHNSLCSNHIYLFGNEAQRSRYLPQLTSG-------------QALGAWAMTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D A + +      D         +     ++  ++++A  +       +   + + 
Sbjct: 129 GSGSDAAGMQATAVLEGDHWVLNGTKNFITQGSVAGIYVIMALTDRATRERGISAFIVEQ 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              GL   R ++K+G R++ T ++   +        L  +  G ++ + IL    +  A 
Sbjct: 189 GTPGLRVGRKEHKMGFRASDTAQVILEDVRIPDANLLGDLHHGFIDALTILDAGRIGMAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +SV   R  L E + YA+ R   G  + +   ++  +AD+A +I AA  L  + A   D 
Sbjct: 249 LSVGIARGCLEEGLKYAKERQAFGRPIANFEAIQWKLADMATEIDAARLLVLQAAYLKDT 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EA+YA       K +  + A     EA++  GG GYI+E  + R++R++   +I
Sbjct: 309 DQPFTKEASYA-------KLFASETAMKAATEAVQIHGGYGYIKEFPVERYFRDAKFCAI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 362 GEGTSEIQRLIIAREL 377


>gi|170722058|ref|YP_001749746.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760061|gb|ACA73377.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 383

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 132/357 (36%), Gaps = 26/357 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           R+    GL   +    F            A           G +MS   +      L   
Sbjct: 44  RKMGELGLLGMVVPEEFGGSYTDYVAYALAVEEISAGCGATGAMMSIHNSVGCGPLLAYG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + W P++ S E             V     LTE + G++   + ++ + I DG +
Sbjct: 104 TPEQQQAWLPRLASGE-------------VIGCFCLTEPQAGSEAHNLRTRAELI-DGQW 149

Query: 227 CLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+       I+ A  +  +G   +   L      G    R ++K+G R++ 
Sbjct: 150 VINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVPTDNPGFKVDRSEHKMGIRASD 209

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F N        L     G    +  L    +  A  ++   R +   A+ Y+R R
Sbjct: 210 TCAVTFDNCCIPAANLLGERGKGLAIALSNLEGGRIGIAAQALGIARAAFEAALVYSRDR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   +   +AD+ + + AA  L    A      +    E       A   K 
Sbjct: 270 VQFGKPINEHQSIANLLADMQVQVNAARLLVLHAARLRSAGRPCLSE-------ASQAKL 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +  +MA  V + A++  GG GY+E+  + R+YR++    I  GS     + +   L+
Sbjct: 323 FASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRMLIARELK 379


>gi|119898785|ref|YP_933998.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119671198|emb|CAL95111.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 595

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/527 (19%), Positives = 199/527 (37%), Gaps = 66/527 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWD--KVE 98
           +L  L            E     +++   +E  + A     P        G R +  KV 
Sbjct: 14  ILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQGDEQGCRLEDGKVI 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               W     +    G         F      +        ++    +    L   +V  
Sbjct: 74  APDGWQEAYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTNMAFTMLPQLNVGQ 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  + +  T    + W  K+ S E+  T             + LTE + G+D+AA  ++ 
Sbjct: 134 AEALLIAATDEQKQTWLHKVVSGEWGST-------------MNLTEPQAGSDLAATRARA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
           +  +DG Y L G K F+S    +       ++LA++         +  F+VP+ L +   
Sbjct: 181 EPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG 240

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
             G  N +    +++K+G   + T  + + +     G+L+G  N     +  M       
Sbjct: 241 SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFG 300

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATA 371
             +        +   A+ YAR R           G  ++  P +KR +  +   + A  A
Sbjct: 301 VGVQGAGLAERAYQFALGYARDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRA 360

Query: 372 LSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L +  A  FD A   +++A       Y  ++ P+ K W  ++   V  EA++  GG G++
Sbjct: 361 LLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWSTEVGNDVCDEAIQVFGGMGFV 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE  IA+ +R++   +I  G+      D++                + ++ G++ +++I 
Sbjct: 421 EETGIAQFFRDARIITIYEGTTGIQANDLIG-------------RKILRENGATLRELIA 467

Query: 486 ILRDSISLCKEDKGL---ARFLTEKI-ALASSAAALYRAGMNDIADV 528
            L  ++   +ED+ L   A    E I AL ++A  +   G + +ADV
Sbjct: 468 DLSATVLALREDEQLADIADAFAETIDALETAADWVLANGKDRLADV 514


>gi|226295306|gb|EEH50726.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 439

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+ E  HPA   ++ +    GL        F          I        
Sbjct: 78  EQIGPKVRDMDEAEAMHPA---VIEQLFEQGLMGVEIPEEFGGAGMNFTSAIVGIEELAR 134

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  L     T   + +       + K W PK+               T       L
Sbjct: 135 VDPSVSVLCDVHNTLVNTAILRFADAAIKKKWLPKL--------------ATDTVGSFCL 180

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D  A+ ++  K S G        W  +S  +  FI+ A ++   G   +   +
Sbjct: 181 SEPASGSDAFALQTKAVKTSSGYKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFI 240

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +    G    + + K+G R+++T  L F +        + V     +    L  L+   
Sbjct: 241 VEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLIGVEGQGYKYAINL--LNEGR 298

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  +A    +IAAA AL F  
Sbjct: 299 IGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVFNA 358

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 359 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGSAVEWMGGMGFVREGIAEKMFRD 411

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 412 SKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|257469706|ref|ZP_05633798.1| acyl-coa dehydrogenase, short-chain specific [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063938|ref|ZP_07928423.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689614|gb|EFS26449.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           ulcerans ATCC 49185]
          Length = 375

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 143/378 (37%), Gaps = 39/378 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L+R   +GL    +D+ +          I A           
Sbjct: 26  PAAAEVDRKAEAPM--ENLKRMGAEGLMGIPFDKKYGGAGLDTKAYISAVEELSKGCAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +  A  +         + +               P+ K       G TE + 
Sbjct: 84  GVIMSAHTSLCAWPIYQYGNEMQKEKYL-------------VPLAKGEKLGAFGWTESQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GT +           D  Y L+G K  +++   ++ F++ A+ +       +   + +  
Sbjct: 131 GTRV-----TAVLDGD-KYILNGKKVLITNALEAEIFVVFAKTDMEKTENNLSGFIVEKG 184

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G      ++K+G R ++T EL F N         N+        KI +  L+   + V
Sbjct: 185 AKGFTIGEPEDKMGVRGSSTCELIFENCIVP---KENLLRKEGTGFKIAMCTLNGGRIGV 241

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V LA     EAI Y + R V+G  +      +  +AD+   I A   L++R A++ 
Sbjct: 242 AAQAVGLAQGALDEAIKYVKEREVNGKKVSQFQHTQFLLADLQTRIDAVRLLTYRAADTK 301

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       E  YA  MA + K+   K+A  V  +A++  GG+GY+++  + R  R++   
Sbjct: 302 DS------EGEYA-HMASMAKFLASKVALKVTEKAVQLFGGNGYLKKYPVERMLRDAKVT 354

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + + N +
Sbjct: 355 EIYEGTSEVQKIVIANWM 372


>gi|254819508|ref|ZP_05224509.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 389

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 124/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENSRFP--QEALEALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I                S      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKQVLPSI-------------ADGSAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  ++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAGSMRTRAKADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISSFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFSVGPKEKKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKDRKQFGRPVSDNQGVQFMLADMAMKVESARLMVYHAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +      ++   ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GE------SHLGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|152985560|ref|YP_001348044.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150960718|gb|ABR82743.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 375

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 139/394 (35%), Gaps = 31/394 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +++AR   +   +L    P    WD+    PA    +R     G    +    +    
Sbjct: 9   QIRDMARQ--FAQERLK---PFAADWDREHRFPA--EAIREMADLGFLGMLVPEEWGGAQ 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +   M +    +    + +  ++ +       
Sbjct: 62  TGHLAYAMALEEIAAGDGACSTIMSVHNSVGCMPIHKFGSAEQKERFLRQLATG------ 115

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                  S+     LTE + G+D + + ++ ++  D        ++  S   +   I+ A
Sbjct: 116 -------SMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGAKQFITSGSHAGMVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
             +   G   +   +      G    R+++K+G  ++ T +L F++        LG+   
Sbjct: 169 VTDPEAGKRGISAFIVPTDTPGYEVVRVEDKLGQHASDTCQLAFNDLRIPASLRLGEEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  +V   R +   A  YA  R   G  +I+   +   +AD+A 
Sbjct: 229 GYRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            IA A  +    A+  +       EA+ A       K +  +MA  V + A++ +GG GY
Sbjct: 289 RIAVARQMVHHAASLREAGLPCLTEASMA-------KLFASEMAEEVCSAAIQTLGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +++  + R YR+     I  G+ +   L +   L
Sbjct: 342 LKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375


>gi|284992726|ref|YP_003411280.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284065971|gb|ADB76909.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 385

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 67/404 (16%), Positives = 138/404 (34%), Gaps = 26/404 (6%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
             G Y L+    E  R A  +  +     P     D     P      +     G H + 
Sbjct: 5   AAGLYALTEEH-EAIREAVRDIAE-REIAPYAAEVDADSRFPV--EAQKALTAAGFHATH 60

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              ++                       A  + + +   +  V L  +  + +     I 
Sbjct: 61  IPEAYGGEGADAIATCIVIEEVARVDASASLIPAVNKLGSMPVILAGSEDLKQRVLRPIA 120

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E               I  GL+E+  G+D AA+ ++ +   D         W  +S +
Sbjct: 121 AGE-------------AMISYGLSEREAGSDAAAMRTRARLDGDSWVLNGTKAWITNSGI 167

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           S+ + ++A  +   G   +          G      + K+G + + T EL F++      
Sbjct: 168 SEWYTVMAVTDPEKGANGISAFAVHRDDPGFAVGPKERKMGIKGSPTCELYFTDCTIPAD 227

Query: 300 GDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +    TG    ++ L          +V   + +L  A+ Y R R   G  + +   ++
Sbjct: 228 RIVGEPGTGFKTALRTLDFTRPTIGAQAVGIAQGALDAAVAYVRERKQFGKAVAEFQGVQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + I AA  L +  A + ++             ++   K +   +A  V  +A+
Sbjct: 288 FMLADMEMRIEAARHLVYVAAAAGEQGHPD------VTRVSASAKAFASDVAMQVTTDAV 341

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG+GY ++  + R  R++    I  G+     + +   L +
Sbjct: 342 QLFGGAGYTQDFPVERMMRDAKITQIYEGTNQIQRMVIARSLLR 385


>gi|170727562|ref|YP_001761588.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812909|gb|ACA87493.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 389

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 142/377 (37%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  E+ D+    P  + L       GL        +    +   AH +    +   +   
Sbjct: 33  PIAEKTDRDNAFP--NELWPVLGDMGLLGVTVSEEYGGANMGYLAHVVAMEEISRASASI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQINRNGNAEQKAKYLPKLVSGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  + P ++ +++ A+ +   G   +   + D   
Sbjct: 138 GSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLDKGAHGITAFIVDRDS 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +       + N+  G    +K+L+  LD   + +S
Sbjct: 198 KGFSTAQKLDKLGMRGSNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLS 254

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +  A       Y   R   G  +    +++  +AD+   + AA +  + +A S D
Sbjct: 255 GGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAKSCD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  ++A  +  +A++ +GG+GY+ E +  R  R++    
Sbjct: 315 RGETTRKDAAGA-------ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 368 IGAGTSEIRRMLIGREL 384


>gi|186474945|ref|YP_001856415.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191404|gb|ACC69369.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 376

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 140/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    PA     R+    G +  +    +                        
Sbjct: 24  PNAAQWDRERIFPA--DAHRQLAELGAYGVLVPEEYGGAGLDALALALILEEIAAGDGGT 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +S +      + L     +  +DW               P+ +  +     LTE + 
Sbjct: 82  STAISVNNCPVCSILLTYGNEQQKRDWL-------------TPLARGEMLGAFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +A+ +   +  DG Y L+G K F++S  +    I++A  +   G   +   +    
Sbjct: 129 GSDASALRTTATRDGDG-YMLNGVKQFITSGKNGNVAIVMAVTDKNAGKRGISAFIVPTE 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    RL+ K+G  S+ T ++ F N         N+     E  +I L  L+   + +
Sbjct: 188 TPGYLVARLEEKLGQHSSDTAQIVFDNCRVPA---ANLIGSEGEGYRIALSGLEGGRIGI 244

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +       A+ YA+ R   G  L     ++  +AD+A  + AA  L +  A+  
Sbjct: 245 AAQSVGMARAAFEAALAYAKERESFGQALFSHQAVQFRLADMATQLEAARQLIWHAASLK 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EAA A       K +  + A  + + A++  GG GY+ +  + R YR+    
Sbjct: 305 DAGQPCLTEAAMA-------KLFASEAAERICSAALQIHGGYGYLSDFPVERIYRDVRVC 357

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+ +   + +   L
Sbjct: 358 QIYEGTSDIQKILIARGL 375


>gi|170690037|ref|ZP_02881204.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144472|gb|EDT12633.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 393

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 131/376 (34%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 32  PRAGEIDRTDQFPM--DLWRKFGDLGVLGMTVSEEYGGANMGYTAHMVAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIHRNGTDAQKQKYLPKLVSGEH-------------VGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P  D  ++ A+ +       +   + +   
Sbjct: 137 GSDVVSMKMRADKKGDHYVLNGTKMWITNGPDCDTLVVYAKTDVEANSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    +  +K+G R + T EL F +        L    G V+ +  +  LD     ++G
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNGGVKVL--MSGLDYERAVLAG 254

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  A     + Y   R   G  + +  +++  +AD+   + A  A  + +    D 
Sbjct: 255 GPTGIMVAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAYLYAVGRQLDT 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +E     R        +  + A  +  EA++ +GG+GYI E  + R +R++    I
Sbjct: 315 --LGTEHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGRLWRDAKLYEI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 373 GAGTSEIRRMLIGREL 388


>gi|28867730|ref|NP_790349.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28850965|gb|AAO54044.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 601

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 91/502 (18%), Positives = 180/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTKAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGVGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KSADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++G+  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEGVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  I D
Sbjct: 491 LAALNKEWGELTLKVGMAAIKD 512


>gi|196248594|ref|ZP_03147295.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196212319|gb|EDY07077.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 382

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 146/377 (38%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P   +   +   +G  C   D  +  +    A+ +             
Sbjct: 28  PYYDEWEQRGIIP--RSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    + W PK  S E             +   + +TE   G
Sbjct: 86  VGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    I++A + +   +     +  L+ + 
Sbjct: 133 SDLANISTTAVKDGD-YYIVNGQKTFITNGIHADLIVVACKTDPHAKPPHRGISLLVVER 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 192 DTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V  +   HY ++R   G  + +   ++  +A++A DIA       R+      
Sbjct: 252 AAQTAAEVMFSLVKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    E + A+        W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I
Sbjct: 312 GKQIVTEVSMAKW-------WITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAI 364

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 365 YAGTNEMMKTIIARQLD 381


>gi|165918615|ref|ZP_02218701.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334]
 gi|165917743|gb|EDR36347.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334]
          Length = 387

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               E+ R A           P     D     P    L  +    G+     +  +   
Sbjct: 10  DETIEMLREAVQQFAS-EEIAPRAAFIDANNQFP--RDLWPKLGDLGVLGITVNEEYGGS 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T    K + PK+ + E+   
Sbjct: 67  QMGYLAHVIAMEEISRASGSVGLSYGAHSNLCVNQINHFGTETQKKRYLPKLINGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + ++  D         W  + P +D  I+ 
Sbjct: 124 ----------VGALAMSETEAGSDVVGMRLRAEQKGDIFILNGTKMWITNGPEADVVIVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+LN
Sbjct: 174 AKTDPGAGSRGITAFLIEKDFPGYRTAQKLHKLGMRGSDTCELVFDHCEVPKENILGELN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        L      +  M+  L   + Y   R      + +  +++  IAD+ 
Sbjct: 234 KGISVLMSGLDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +A S D  K  S++AA A +       +  + A  V  +A++C+GG+G
Sbjct: 294 TALNASRAYLYAIAQSADAGKIHSKDAASALM-------FAAENATQVALQAIQCLGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R  R++    I  G+     + V   L +   
Sbjct: 347 YITEFPVERFLRDAKLYEIGAGTSEIRRIVVGRELFREGK 386


>gi|86740254|ref|YP_480654.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567116|gb|ABD10925.1| Butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 387

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 137/403 (33%), Gaps = 29/403 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS    EL R A           P     D     P         +    H       
Sbjct: 9   YRLSDEHLEL-RDAVRTLAY-DKIAPYAADVDAHSRFP--QEAYDALVASDFHAPHVPVE 64

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           ++ V                    +  + + +   +  + L  T  + + + P       
Sbjct: 65  YDGVGADALATCIVIEEVARVCASSSLIPAVNKLGSLPLILGGTDDLKQRYLP------- 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+ +   A   GL+E+  G+D AA+ ++  +  D         W  ++ +S+ +
Sbjct: 118 ------PLARGEAAFSYGLSEREAGSDTAAMKTRAVRDGDHWVLSGQKSWITNAGISEYY 171

Query: 244 IMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            +LA  +  GR G   +   + + S  G      + K+G + + T EL F +       L
Sbjct: 172 TVLAVTDPDGRRGAN-ISAFIVESSDPGFSVGSPEKKLGIKGSPTRELLFDDCRIPEDRL 230

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+L               +     ++   + +L  A++Y + R   G  + D   ++  
Sbjct: 231 IGELGHGLRLALRTLDHTRVTIGAQAIGIAQGALDLALNYVKERKQFGKRIADFQGIQFM 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+ + AA  + +  A   +         A         K      A  V  +A++ 
Sbjct: 291 LADMAMALEAARQMVYVAAAKSERGD------ADLTFFGAAAKCLASDTAMQVTTDAVQL 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +GG GY ++    R  R++    I  G+     + +   L  G
Sbjct: 345 LGGYGYTQDFPAERLMRDAKITQIYEGTNQIQRIVMARQLLAG 387


>gi|198432777|ref|XP_002126363.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
           8 [Ciona intestinalis]
          Length = 422

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 80/396 (20%), Positives = 152/396 (38%), Gaps = 31/396 (7%)

Query: 66  LSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   +E   +A ++   +L    P  ++WD+    P    +++RS + G      D  +
Sbjct: 49  LSDEVKEFQLLALDFAKKELE---PNMQKWDEQGHFPV--DVIKRSANLGFGGLYCDEKY 103

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                 +              +     +S     A MV      +    W P + + E  
Sbjct: 104 GGTGLSRLATSVIFEALSTGCVSTTAYISIHNMVAWMVDSFGNEKQKNKWLPSLTAME-- 161

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                            LTE   G+D AA+ +  ++  D  Y L+G K F+S   +SD +
Sbjct: 162 -----------KLSSYCLTEPGSGSDAAALITSAKQDGDN-YILNGSKSFISGATVSDVY 209

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +++ +  G+ G   +  LL + +  GL + + + K+G +S  T  + F +    +   + 
Sbjct: 210 LVMVRT-GKEGPKGISTLLVEKNTPGLTFGKSEVKLGWKSQPTGIVNFEDCVVPVENRIG 268

Query: 304 -VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +G    MK      ++ +  S+ G + S   A  +   R   G  L+    ++  +A
Sbjct: 269 PAGSGFNIAMKGLNGGRINISSTSLGGAQKSFEHARDHLSVRKAFGKELLHNQYLQYRMA 328

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  I ++  L  + A + DE          A  +  + K         V   A++  G
Sbjct: 329 EMATKITSSRFLVRQAAQAMDEKHPN------APALCAMAKLHATDNCFDVCNSALQMFG 382

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+ E  + +  R+   N IL G+   M L +  
Sbjct: 383 GYGYLCEYPVQQFVRDVRVNQILEGTNEIMRLVIAR 418


>gi|148265075|ref|YP_001231781.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398575|gb|ABQ27208.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 385

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 146/402 (36%), Gaps = 32/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + ++  TA++ AR      P        G+R       PA+   LR+    G        
Sbjct: 9   QKLIQETARDFARA--ELEPVAARLDREGDR-------PAFLNNLRKLAELGFMGLNVKE 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +            A      A       +S +     ++  + +    +   P+I S E
Sbjct: 60  EYCGAAAGTVAFSVAMTEIARACASTAVTVSVNNMICEVIQAVGSEEQKQACIPRICSGE 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +             A    LTE   G+D A +T+   +  DG        +  S+P +  
Sbjct: 120 F------------AAGSFALTETGAGSDPAGMTTTAVQDGDGWLLNGSKIFITSAPYAGV 167

Query: 243 FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           F++ A  +        +   L +    GL   + + K+G  ++AT EL F N       L
Sbjct: 168 FVVWAVTDRSAPKGKGISCFLVEQGVPGLIIGKQEEKMGQHASATNELIFDNCRIPKNAL 227

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G LN              +    + +     ++  A  YA  R   G  + D   ++  
Sbjct: 228 MGKLNDGFRIAVGELAGGRIGIGSLGLGLGLAAMDFATRYATERSQFGQKISDFQAIQWM 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD   ++ AA  L    A   +  KS ++EA+ A++       +  + A     +A++ 
Sbjct: 288 IADAYTELEAARLLLMNAAFRKETGKSFAKEASMAKM-------YATEAANKACYKAVQM 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG GY ++  + R+ R++   SI  G+     L +   + K
Sbjct: 341 LGGYGYTKDFPVERYARDARITSIYEGTNEIQRLIISREILK 382


>gi|327480526|gb|AEA83836.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 379

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W +   +PA    +      G    +    +            A           
Sbjct: 24  PFAEQWSREHRYPA--EAIGDMAALGFFGMLVPEQWGGSDTGYLAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L     +  +D+               P+ +        LTE + 
Sbjct: 82  STIMSVHNSVGCVPILRFGNDQQKRDFL-------------GPLARGEQIGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ ++  D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F +    +   L     G    +  L    +  A  +
Sbjct: 189 PGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YAR R   G  +++   +   +AD+A  IA A  +    A   +  +
Sbjct: 249 VGMARAAFEAARDYARERETFGKPIVEHQAVAFRLADMATQIAVARQMVHHAAALREAGR 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAERVCSAAIQTLGGYGYLSDFPVERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVISRNL 375


>gi|327440911|dbj|BAK17276.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 378

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 134/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           PG    DK +  P    + +   + G+    +   +        +  I    L       
Sbjct: 26  PGAIERDKTKAFPV--EIFKELSNMGIMGLPFPEQYGGAGADTISFAIVTEELSRTCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +      + + L  T    + +               P+         GLTE   
Sbjct: 84  GITYSAHISLGGAPLHLFGTEAQKEKYL-------------TPICTGDSFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGS 266
           G+D     +      +G + ++G K F+++      + L  +  R G    +  ++    
Sbjct: 131 GSDAGGTETTAVLD-NGEFVINGSKVFITNASYAKHLALTAITNRDGNKKEISAIIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G   +    K+G  ++ T EL   N        L +     +    L  LD   + ++
Sbjct: 190 AKGFTIKSEYEKMGLNASNTTELIIENVRVPEENLLGIRGNGFKQF--LTTLDGGRIGIA 247

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V +A+     A+ YA+ R   G  L D    +  +AD+ + I  A    ++ A   D
Sbjct: 248 AMAVGIAQGALNKAVQYAKERKQFGKALADFQATQFKLADMEVKIQLARTFVYKAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +   +EAA       I KY+  +MA  V  EA++  GG GY++E  + R  R++    
Sbjct: 308 QGRPFGKEAA-------IAKYYASEMAMEVCDEAIQIHGGYGYMKEYEVERFLRDAKLLE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 361 IGEGTSEVQKMVIARHI 377


>gi|258591419|emb|CBE67718.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 379

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 138/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+    P     +++    GL        +                   A    
Sbjct: 26  PLAKQVDEEGIFP--QETVKKMGELGLMGVAIPTEYGGAGADNVCYAIGMEEIARACAST 83

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS  +   A  +    T    + +   + S               +     L+E   
Sbjct: 84  SVIMSVNNSLVADALYKFGTEAQRQRYLTPLASG-------------KLLGCFALSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +A  +  ++  DG        +  ++  +D  ++ A V+  +    V  LL +   
Sbjct: 131 GSDASAQQTLVKRDGDGFVLNGTKNFITNALEADLALVFATVDRGLRAKGVYALLVEKGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    +++ K+G    +  ++ F +         N+     +  KI ++ LD+  + ++
Sbjct: 191 PGFTITKVEKKLGLHGTSCCQVVFEDCRVPSD---NLLGEMGQGFKIAMVTLDAGRIGIA 247

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A+A     I YA+ R      +     ++  IAD+A  I AA  L++R A   D
Sbjct: 248 AQAVGIAQAALDISIRYAKERVAFDKPIASFQAIQWMIADMAAQIEAARLLTYRAAWLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +    ++E+A A       K +  + A     +A++  GG GY+ +    R +R++    
Sbjct: 308 KGLRHTKESAMA-------KLFASETANRAATKALQIHGGYGYLYDFPTQRLFRDARITE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L + + L
Sbjct: 361 IYEGTSEIQRLVIAHQL 377


>gi|77360395|ref|YP_339970.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875306|emb|CAI86527.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 391

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 129/358 (36%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L  +    GL        F         H I    +   +        + S    + + 
Sbjct: 49  QLWPQMGEMGLLGMTVAEEFGGAGLGYLEHVIAMEEISRASASIGLSYGAHSNLCVNQIN 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E+                L ++E   G+D+ ++  + +K  D
Sbjct: 109 RNGTQAQKEKYLPKLISGEH-------------IGALAMSEPNAGSDVVSMKLKAEKKGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +   ++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 156 KYILNGNKMWITNGPDAHTLVIYAKTDLTAGAKGITAFIVESDFPGFSTAQKLDKLGMRG 215

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F N        LG+LN     +        +  A   +  M+  +   + Y  
Sbjct: 216 SNTCELVFENCEVPEENILGNLNEGVKVLMSGLDYERVVLAAGPLGIMQACMDIVVPYIH 275

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   + AA +  + +A S D  ++  ++AA A       
Sbjct: 276 ERKQFDTPIGQFQLIQGKVADMYTQMNAARSYVYTVARSCDRGETTRKDAAGA------- 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  ++A  +  +A++ +GG+GYI E +  R  R++    I  G+     + +   L
Sbjct: 329 ILYAAELATKMALDAIQILGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 386


>gi|145222706|ref|YP_001133384.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145215192|gb|ABP44596.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 380

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           T     K W P + S E               I + +TE   G+D+A I +   +  D  
Sbjct: 103 TNDEQKKRWLPGVTSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++A+ +   G       + +    G    R  +K+G  S 
Sbjct: 149 WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERDMEGFTRGRKLDKMGLHSQ 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R    E + Y++ 
Sbjct: 209 DTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSIAISAIAGARAVFDETLQYSKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R      + +  + EAA A+       
Sbjct: 269 RKAFGQSIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGELTAVEAAKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            W  ++A  V+ + ++  GG GY+ E  +AR Y +    +I  G+   M   +   L
Sbjct: 323 -WATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGREL 378


>gi|307596317|ref|YP_003902634.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307551518|gb|ADN51583.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 401

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 152/405 (37%), Gaps = 30/405 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +L  TA+E A+     +P+L         +++ E  P    L R++   GL        +
Sbjct: 17  LLRKTAREFAQ--RNFSPEL------AREYERKEEFP--WDLYRKAGELGLLAPSIPTEY 66

Query: 125 EPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                      +      + A+   G  +     S+ ++    T    K + P       
Sbjct: 67  GGGGFTTYLADMVVTEELVRAEPTLGEAIMSGPFSSHLLYFFGTEEQKKKYLP------- 119

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+ +         TE   GTDI  +++  ++  D         +  ++P +   
Sbjct: 120 ------PVYRGETTFFGAYTEPEHGTDITQLSTVAERKGDKFILRGVKTFITNAPTAKYG 173

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++LAQ +           +      G+  ++L  K+G R++   E+   N    +   + 
Sbjct: 174 VVLAQTDPEKKHRGQTLFIIHTDWPGVQIRKLSGKMGQRASPVGEITLDNVEVPIDYVVG 233

Query: 304 VSTGPVEDM------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
              G  +          +  L  A +++  M  +  +A+ YA++R   G  +I+  +++ 
Sbjct: 234 GEKGINQGFYWTLAYFNVSRLGPAAIALGIMLAAFDKALEYAQKRAQFGQPIINFQLIQE 293

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +A+ I  + ++ +R A   D       +      +    K +    A  VI EA++
Sbjct: 294 KLARMAMLIEVSRSMLYRAAYYVDSYIKFQIDPRAMAAITSAAKVFITDAANQVIDEAIQ 353

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             GG GY EE  + R++R+     I  G+    +L + + L +G 
Sbjct: 354 IHGGYGYFEEFDVERYWRDHRVTRIYEGTNEINLLTITDALRRGA 398


>gi|138894835|ref|YP_001125288.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266348|gb|ABO66543.1| Probable acyl-coA dehydrogenase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 382

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 82/377 (21%), Positives = 147/377 (38%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P   +   +   +G  C   D  +  +    A+ +             
Sbjct: 28  PYYDEWEQRGIIP--RSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    + W PK  S E             +   + +TE   G
Sbjct: 86  VGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    I++A + +   +     +  L+ + 
Sbjct: 133 SDLANISTTAVKAGD-YYIVNGQKTFITNGIHADLIVVACKTDPHAKPPHRGISLLVVER 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 192 DTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V  + A HY ++R   G  + +   ++  +A++A DIA       R+      
Sbjct: 252 AAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    E + A+        W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I
Sbjct: 312 GKQIVTEVSMAKW-------WITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAI 364

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 365 YAGTNEMMKTIIARQLD 381


>gi|221066511|ref|ZP_03542616.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711534|gb|EED66902.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 388

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 142/406 (34%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +      WD+    P     + ++   G       
Sbjct: 2   DFELSEDQRAFADTARAFAQAELAPH---AAEWDREHIFP--REAIAKAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    T  V  +W  ++ S 
Sbjct: 57  ESIGGLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEQLTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        S      LTE   G+D A++ ++ + + +         +   +  +D
Sbjct: 117 -------------SKLASYCLTEPGAGSDAASLKTRAELVGNEYIVNGSKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  +   G   +   +      G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVLMARTGDAGSGASGISAFVVPADAAGVSYGKKEEKMGWNSQPTRVISFDNVRIPAHN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L +A HY + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALTQAQHYMQERKQFGKAIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V  EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFMVCNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   + +G  
Sbjct: 338 LHGGYGYIREYPLERLMRDARVHQILEGTNEIMRVIIARRMLEGDA 383


>gi|257455070|ref|ZP_05620313.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257447542|gb|EEV22542.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 594

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 80/490 (16%), Positives = 174/490 (35%), Gaps = 60/490 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW-------DKVEFHPAWHALLR 108
           ++L  +    ++   +E+++ A      L      G+          KV+    + A   
Sbjct: 29  EQLAHVDSDTVNMILEEMSKFAKN---TLLPINRSGDEEAAQYLGEGKVKTPTGFKAAFD 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      D +       +   + A  +   A        + S  +   +    + 
Sbjct: 86  EYAQGGWIGLGGDPNHGGQGMPKMVTMLAEEMVFTANQSFALYPNLSGGACMCIYNAGSE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +  KI+S E+  T             + LTE   GTD+  I ++     DG Y +
Sbjct: 146 EQKQTYLEKIYSGEWTGT-------------MCLTEPHAGTDLGIIKTKAVPNQDGSYNI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F+++   D       ++LA+          +  F+VP+   +     G  N +  
Sbjct: 193 TGTKIFITAGEHDLADNIIHLVLAKTPDAPAGSRGISLFIVPKFHVNADGSLGERNAVSC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    GF++G  N     +  M     L   +  + G  ++ 
Sbjct: 253 GSIEHKMGIKASATCVMNFDGAKGFMVGAENTGLASMFIMMNYERLTMGLQGIGGAELAY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A  Y   R                  ++    ++R + +      A+   +  +A   
Sbjct: 313 QNATAYTLDRIQGRADSGIQEPNKAADPIVFHADVRRMLLNAKTISEASRCFAMYVAKEL 372

Query: 381 ------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D+A++R        ++ P+ K +          +A +C GG GYI E  + +  
Sbjct: 373 DTNKYTDDAEARKAADDRVALLTPVAKAFLTDRGLEASIDAQQCFGGHGYIREWGMEQIV 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R++  + I  G+     LD+L   +++ G          + +D  ++      I +  ++
Sbjct: 433 RDTRISQIYEGTNGIQSLDLLGRKVVKNGGAFVTTYVQEM-RDFANNMNADHAIKQAILT 491

Query: 493 LCKEDKGLAR 502
              + + L +
Sbjct: 492 SADKLEDLTK 501


>gi|254481256|ref|ZP_05094501.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038419|gb|EEB79081.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 386

 Score =  270 bits (690), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 133/379 (35%), Gaps = 25/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    +L  +   G            +   +                 
Sbjct: 26  PHAAKWDEKSIFP--KEVLAEAGELGFMGMYTPEEAGGLGMSRLDASLIVEELSKGCTAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    + +MV    +  V   W P + S              S      LTE   G
Sbjct: 84  AAFLTIHNMATNMVGKYCSQAVMDQWCPALVSG-------------SKLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  ++ +   +  D  Y ++G K F+S       +++    G  G   +  LL      
Sbjct: 131 SDAGSLRTSAVQDGDD-YLVNGSKVFISGAGETDVLVVMLRTGEAGPKGISALLIPADAQ 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y + ++K+G  +  T  + F N    +   LG          +      ++ A  S+
Sbjct: 190 GISYGKKEDKMGWNAQPTRMVTFDNVRVPVANRLGREGQGFAIAMEGLDGGRINIATCSI 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EA+ Y + R      + D    +  +AD+  D+ AA  +    A+  D    
Sbjct: 250 GTAQQALEEAVAYVQERKQFDTAIADFQATQFKLADMLTDLVAARQMVRLAASKLDNKD- 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                + A     + K +   +   V  +A++  GG GYI+E  + RH R++  + IL G
Sbjct: 309 -----SQASTYCAMAKRFATDVGFNVCNDALQLYGGYGYIKEYPMERHVRDTRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +   M + V   L     L
Sbjct: 364 TNEIMRVIVSRRLLMEGAL 382


>gi|291407027|ref|XP_002719859.1| PREDICTED: short-chain acyl-CoA dehydrogenase [Oryctolagus
           cuniculus]
          Length = 412

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 82/378 (21%), Positives = 143/378 (37%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A ++     GL                     A          A
Sbjct: 55  PIAAQVDKEHLFPA--AQVKEMGKLGLLAMDVPEELSGAGLDYLAYAIAMEEISRGCASA 112

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +MS + +      L            K  S+E       P           L+E   G
Sbjct: 113 GVIMSVNNSLYLGPIL------------KFGSKEQKQQWITPFTGGDKIGCFALSEPGNG 160

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  + A ++ A  +  +    +   L      
Sbjct: 161 SDAGAASTTARAEGDTWVLNGTKAWITNSWEASATVVFASTDRALQNKGISAFLVPMPTP 220

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++ 
Sbjct: 221 GLTLGKKEDKLGIRASSTANLIFEDCH---IPRDNLLGEPGMGFKIAMQTLDMGRIGIAA 277

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +A+     A++YA  R   G  L     ++  +AD+AL + +A  L++R A   D 
Sbjct: 278 QALGIAQAALDCAVNYAENRRAFGAPLTKLQAVQFKLADMALALESARLLTWRAAMLKDN 337

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  ++EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    I
Sbjct: 338 KKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVSEMPAERHYRDARITEI 390

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L K
Sbjct: 391 YEGTSEIQRLVIAGQLLK 408


>gi|325525847|gb|EGD03572.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 380

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 128/368 (34%), Gaps = 22/368 (5%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D  E       L+      GL       ++            A        L A  L + 
Sbjct: 28  DMEETKRFPQELVEVFGDLGLLQMWVPEAYGGPGGDLTSVCIAKEEIGKVSLAASTLCAN 87

Query: 155 SVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +     +  L   T      + P+               K      + +TE   G+D++A
Sbjct: 88  NSIGLILPLLHFGTDAQRARYLPE-------------AAKGRTVSSVAITEPEAGSDVSA 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           I +  ++  D         W   +  +   ++ A+     G   +   L D    GL   
Sbjct: 135 IRTTARRDGDSYVINGQKSWITWAAQAHYMLVFARTSEGRGHDGISVFLIDTKTPGLKIG 194

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           R + K+G   + T ++ F +        L     G    MKI  L     A  S+   + 
Sbjct: 195 RKEVKMGRHGSPTYQVFFEDMRVAADCLLGEEGNGFKACMKILDLNRPSVAASSLGLAQA 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L E++ YA+ R   G  + D   ++  +AD+A+ I AA AL +      D       + 
Sbjct: 255 ALDESVQYAKDRRQFGKRIGDFQAIQFKLADMAMKIEAARALLYTSTQEIDAG-----DT 309

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +   +++ + K +   +A     EA++  G  GY  E  + R  R++  N IL G+    
Sbjct: 310 SRLTLLSSMAKCYVTDIAMEAALEAVQVHGSYGYSTEYPVERFMRDAKLNQILEGTNEIH 369

Query: 451 VLDVLNLL 458
            L +   L
Sbjct: 370 RLIIARQL 377


>gi|229087252|ref|ZP_04219396.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus
           Rock3-44]
 gi|228696042|gb|EEL48883.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus
           Rock3-44]
          Length = 381

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 135/377 (35%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +        G  C + D           + +             
Sbjct: 27  PYYIDWEKEGMIP--RSFWTSMGSKGFLCPMVDEPHGGAGADFGYSVVINEELEKVGSSL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +           T    K W PK  S EY                + +TE   G
Sbjct: 85  IGIGLHNDIVVPYFTQYGTEEQKKRWLPKCVSGEY-------------ITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLVPRLLEDG 265
           +D+A+I +  +K  D  Y ++G K F+++ + +D  I++ + + +V      +  L+ + 
Sbjct: 132 SDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTKVKPAHKGMSLLVLER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +   KIG  S  T EL F N       LLG+       + +      L  AI
Sbjct: 191 GMEGFKRGKKLKKIGLHSQDTAELIFENVKVPASNLLGEEGKGFYYLMEKLQQERLIVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V L     Y + R   G  + D   ++  +A++  +I            +   
Sbjct: 251 AAKTAAEVMLHITKKYVKERKAFGKHISDFQTVQFRLAEMYTEIEIGKTFVDDCITAHMN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++   + + A+        W   +A  V  E ++  GG GY+EE  IAR YR+ P +SI
Sbjct: 311 GENIVTKVSMAKW-------WLTDLAKKVSTECIQLHGGYGYMEEYEIARRYRDIPVSSI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   ++
Sbjct: 364 YAGTNEIMKSIIAKSMD 380


>gi|162451848|ref|YP_001614215.1| butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161162430|emb|CAN93735.1| Butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 619

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/504 (17%), Positives = 179/504 (35%), Gaps = 72/504 (14%)

Query: 60  LLGEYVLSCTAQELARM-------------ANYNTPQLHAYGPGGERWD--KVEFHPAWH 104
            L E + S       R               +   P        G R +  +V+  P + 
Sbjct: 27  RLDELLGSAPYDAWGRDEVGMVVDEAYKFACDVFGPLNAVGDRVGCRIEGGQVKTPPGFK 86

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
               +    G        +++                  A          +  +A ++  
Sbjct: 87  EAWDKLYEAGWKSVSVSPTYDGQGGPFTLYTVVEEFLCGANAALNMYPGLTYGAAEVIEH 146

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TPR    +  +++  ++  T             + LTE + G+D+ +  +   K  DG
Sbjct: 147 FGTPRQRDLFLKRMYGGQWSGT-------------MCLTEPQAGSDVGSSRTSAVKQKDG 193

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPN 268
            Y + G K F+S    D       ++LA+VEG       +  F+VP++  +     G PN
Sbjct: 194 KYLIRGTKIFISGGDQDLTENVVHLVLARVEGAPPGTKGLSLFVVPKIRVNDDGSLGGPN 253

Query: 269 GLCYQRLKNKIGNRSNATVELEF---SNTFGFLLG-DLNVSTGPVEDMKILIYLDSAIMS 324
            +    +++K+G   ++T  L F       G L+G   +     +  M     +   +  
Sbjct: 254 DVVVGNIEHKMGINGSSTCVLNFGESDACLGELVGTVEHQGMPQMFRMMNGARISVGLQG 313

Query: 325 VSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATAL 372
           VS    +   A+ YA+ R                  +ID P ++R + D+   +    AL
Sbjct: 314 VSVASSAYLNALEYAKDRKQGSSILQWKDATAPRVPVIDHPDVRRMLLDMKSRVEGIRAL 373

Query: 373 SFRLANSFD-----EAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
             +LA   D     + K     A       ++ P+ K +    A  V   A++  GG+GY
Sbjct: 374 IIKLARHQDAVAVYQGKDDRAAAYNQGQVDLLVPLVKAYSSDQAFRVCETAIQTFGGAGY 433

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK 482
            ++  + ++ R++   SI  G+ +   +D++   L + G    +   + + + + ++ K 
Sbjct: 434 TKDYPVEQYCRDAKVFSIYEGTNHIQAMDLVGRKLGQGGGVNLQAFLNDVAEFVKANEKH 493

Query: 483 --VITILRDSISLCKEDKGLARFL 504
             +   +++     +   G A  L
Sbjct: 494 PVLAASIKELREAHEAVAGTAMRL 517


>gi|50086253|ref|YP_047763.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49532229|emb|CAG69941.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 607

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/459 (17%), Positives = 166/459 (36%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVRTPKGYKEAYDQFVQGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWAFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++   M  +    T      + P + +  +  T             + LTE + GTD+  
Sbjct: 130 LSMGCMNTIMQFGTDDQKNTYMPHLVAGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G +++AT  L F    G+L+G++N     +        
Sbjct: 237 PTQDGGVGERNTVACGSIEHKMGIKASATAVLNFDGATGYLIGEINKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSYQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 356

Query: 366 IAAATALSFRLANSFDEAKS---------RSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
                A+ +  A   D+              E         PI K +  ++     +  M
Sbjct: 357 AEGGRAMIYHAAQLADKMADALIIGDQAKFEEYDDKLGFYTPILKGFLTELGLEAASHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++   ++  G+     LD++    LL     +     + + 
Sbjct: 417 QVFGGHGYIKEWGMEQILRDARIATLYEGTTGVQALDLIGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  G   +     LR       +       LT +I LA+
Sbjct: 477 KFCGRHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|33595570|ref|NP_883213.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565648|emb|CAE40296.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 615

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 129/544 (23%), Positives = 221/544 (40%), Gaps = 34/544 (6%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYNTP 82
            P   G++ ++ D  L  L++ +             E +G+        ELA +A+ + P
Sbjct: 26  APDCAGLDFFAIDPSLQQLLSVYVPGAELEYFRPHFERMGKLAGGR-LNELAMVADKHGP 84

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLY 141
            LHA    GE  D +E+HPA+  +   +      H               +   +    Y
Sbjct: 85  VLHARSRWGEDEDWIEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYAGTLSPITKYVFQY 144

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L  Q E G +   SVT  S  ++    +  +     P++ +       K           
Sbjct: 145 LFVQSEFGQMCPISVTDTSIHLIRKFGSEALQARLLPRMLADNLQDLWKG---------T 195

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RV 253
             +TEK GG+D+  + +  ++I DG + L G KWF S   +D  ++LA+ EG       +
Sbjct: 196 QFMTEKSGGSDVGQVETTARQI-DGQWHLHGEKWFSSHVDADIALILARPEGAPAGTRGL 254

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F +PR  EDGS N     RLK+K+G RS A+ EL     F +L+GD       + +  
Sbjct: 255 ALFAMPRYREDGSRNSYRIVRLKDKLGTRSMASGELRIDGAFAYLVGDPTQDIKQMMEQV 314

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  L  A+ + + MR  L E++  AR R   G  ++D P+M+R +  + +   AA  ++
Sbjct: 315 NLSRLSHAVRAAAMMRRCLNESMQAARHRQAFGRQVVDYPLMQRQLLKLLVPTEAALTMT 374

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              A++  +A     +  A  R++ P+ K   C+    V   AME  GG+GYIE+   AR
Sbjct: 375 MATADAMAKAYGGDAQCKAALRLLTPLLKLRACRDNVTVATGAMEVRGGNGYIEDFVNAR 434

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ----LFSTLEQDLGSSGKKVITILR 488
             R++    +  G+ N   LD +    +           L   L      +      +  
Sbjct: 435 LVRDAHIGVLWEGTSNINALDAIERAVRKDQAHIALRALLLEKLRAVRAQAPVIAGPLAE 494

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS---THCML 545
              + C+  +G+A     +  +  +A+ALY      +   +   +   +         ML
Sbjct: 495 AVAAACQLAEGVAGDPRHESEVRRAASALY-HASAAVLMAWEATQEGVDGRRLLLADAML 553

Query: 546 HGRF 549
             R 
Sbjct: 554 RTRL 557


>gi|118471048|ref|YP_886192.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172335|gb|ABK73231.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 389

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 126/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENARFP--QEALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P++ S              +      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKQVLPQLASG-------------AAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRARADGDDWVLNGTKCWITNGGKSSWYTVMAVTDPDKGANGISAFMVHQDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFSVGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKDRKQFGTSISDFQAVQFMLADMAMKVESARLMVYHAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K     +A  V  +A++  GG+GY ++  + R  R++    I
Sbjct: 318 GEKN------LGFISAASKCLASDIAMEVTTDAVQLFGGAGYTQDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|148259028|ref|YP_001233155.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146400709|gb|ABQ29236.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 596

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 93/507 (18%), Positives = 181/507 (35%), Gaps = 67/507 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+++      L+      G  ++   V     +          G      
Sbjct: 36  ELIDSVLEEAAKISEEVLFPLNQVGDREGCTYENGVVRTPTGYREAYHTFCEGGWTSISA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  +          +    ++  A +  G     S  +   +    +    K W P I S
Sbjct: 96  DPDYGGQGMPLTAAMMVEEMFCSANVAFGLYPGLSHGAYVALKHSGSDEQKKAWLPNIVS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   GTD+  + ++     DG Y ++G+K F+S+   
Sbjct: 156 GKWTGT-------------MCLTEPHCGTDLGMLRTKAVPNDDGTYSITGNKIFISAGEH 202

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ L       G  NG+    +++K+G   +
Sbjct: 203 DLAENIVHLVLARLPDAPAGVKGISMFLVPKFLPREDGTLGPRNGMQCTAIEHKMGLNGS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +  M     L   I  +    V+   A+ YAR R  
Sbjct: 263 ATCAMSFDGATGWLVGEPNKGLAAMFKMMNTERLSVGIQGLGIAEVAYQNAVAYARERIQ 322

Query: 345 ------------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSR 386
                           ++  P ++R +      I    AL+  +A         D+  ++
Sbjct: 323 GRSLTGTKAPEKQADPILVHPDVRRMLLTSRAYIEGCRALAGWVARELEILEKSDDGDAK 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +A +M P+ K     +   + + A++  GG GYI +  I ++ R++    +  G+
Sbjct: 383 QAADDFASLMTPVVKAMFTDLGFEIASLAVQTYGGHGYIRDHGIEQYVRDARIAMLYEGT 442

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD++                L QD G    + +  + + I   +++  LA    E
Sbjct: 443 NGIQALDLVG-------------RKLPQDGGRLLTRFLDPVLEFIDAHQDNDALA----E 485

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
            +   S A    +     I +  + NR
Sbjct: 486 FLPALSQALEHVQEATGLIMEGAMTNR 512


>gi|311742614|ref|ZP_07716423.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314242|gb|EFQ84150.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 381

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 80/360 (22%), Positives = 132/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R+   GL C      +       AH+             +      +   A  + 
Sbjct: 43  RQLWNRAGDVGLLCLSIPEEYGGGGGTFAHEAILIEEQARVGDSSWGASLHNGIVAHYLL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W PK+ S E             V   + +TE   G+D+  I ++  +  D
Sbjct: 103 AYGTEEQKQHWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAAREGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y +SG K F+++   +D  + + + +       +  +L   S  G    R+ +KIG +
Sbjct: 150 E-YVVSGSKTFITNGSQADLVLTVVKTDPDDRAAGISLMLVPTSAEGFSRGRVLDKIGMK 208

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T EL F N    +   L +    G V+ M+ L    L  A+ +V+ M   LAE + Y
Sbjct: 209 GQDTSELFFDNVRVPVTNLLGLTEGQGFVQLMQQLPQERLLVAVSNVAAMEFCLAETLAY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +      K  +A++A +   A +         DE              A 
Sbjct: 269 VRDRTAFGRPIWGFQNTKFKMAEVATEARVARSFV-------DECIQLHVGEGLDIPTAA 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K WC + A  V    ++  GG GY+ E  IAR + +   + I  GS   M   +   L
Sbjct: 322 MVKLWCSERAQRVADTCLQLHGGYGYMNEYPIARVWADMRVSQIYAGSSEIMKEIISRSL 381


>gi|268568050|ref|XP_002640145.1| C. briggsae CBR-ACDH-1 protein [Caenorhabditis briggsae]
 gi|187029249|emb|CAP31592.1| CBR-ACDH-1 protein [Caenorhabditis briggsae AF16]
          Length = 421

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 134/370 (36%), Gaps = 47/370 (12%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---------S 160
           +  +GL        +            ++    M  +E      PSV++          S
Sbjct: 82  AFENGLMGLHVPEEYGGSG--------SSFFDAMLVIEELAKTDPSVSAMVGIHNTLPVS 133

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    +      + P + S                     ++E   G+D  A+ +  +K
Sbjct: 134 MIIDHGSEEQKLKYLPSLSS--------------DSLASFCISESGAGSDAFALKTTAKK 179

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +S  +  F++ A  +       +   + + S  G+   + ++K+G
Sbjct: 180 DGYHYLISGSKMWITNSSEAQVFVVFANADPSQKYKGITCFIVERSQEGVSVCKEEDKLG 239

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI--- 336
            R+++T ++ F N          +     +  K  I  L++  +++    + LA+     
Sbjct: 240 IRASSTCQVNFDNVRVHESA---ILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQ 296

Query: 337 --HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              Y ++R   G  LID   ++  IA    +I AA  L +  A   +       +AA A 
Sbjct: 297 TIPYLQQREQFGQRLIDFQGLQHQIAQARTEIEAARLLVYNAARMKEYGIPYVRQAAMA- 355

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  ++A +  A+ ++ +GG G+ ++    + YR++    I  G+ N  +  +
Sbjct: 356 ------KLFASQVATSTSAQCVKWLGGVGFTKDFPAEKFYRDAMIGEIYEGTSNIQLNTI 409

Query: 455 LNLLEKGTNL 464
             L++    L
Sbjct: 410 AKLIDNEYKL 419


>gi|88704409|ref|ZP_01102123.1| isovaleryl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701460|gb|EAQ98565.1| isovaleryl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 389

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 134/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    PA   L  +    GL     D  F        AH I    +   +   
Sbjct: 33  PRAAKIDQDNDFPA--DLWPKLGAMGLLGITVDEEFGGSGMGYLAHSIVMEEISRASGSV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ + E+                L ++E   
Sbjct: 91  GLSYGAMSNLCLNQIQRHGNDAQRSHYLPKLCTGEH-------------VGALAMSEANA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    ++  D         W  + P +D +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLNARREGDHYVLNGTKMWITNGPDADIYVIYAKTDIDAGSRGITAFIVERDY 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        L      VE +   +  +  ++S   
Sbjct: 198 PGFSRSPKLDKLGMRGSNTCELVFEDCIVPAENILREEGKGVEILMSGLDYERTVLSGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M+  + E + Y   R+  G  + +  +M+  +AD+  D+ A  +  + +A + D  +
Sbjct: 258 VGIMQACIDEVLPYLHTRNQFGQAIGEFQLMQGKLADMYADLNACRSYLYMVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++             +  + A  +  + ++ +GG GY  E +  R  R++    I  
Sbjct: 318 ETRQD-------CAAVILYTAEKATQLALQTIQALGGYGYTNEANAGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L K + 
Sbjct: 371 GTSEIRRMLIGRELFKASA 389


>gi|312139398|ref|YP_004006734.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325672719|ref|ZP_08152415.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311888737|emb|CBH48049.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325556596|gb|EGD26262.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 132/375 (35%), Gaps = 33/375 (8%)

Query: 99  FHPAWHA-------LLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           FH  W         +   +   G         +     +   +                 
Sbjct: 28  FHDQWEEQNIVDRSVWVEAGKQGFLGMAVPEEYGGGGVEDFRYNAVITEETTRGGYSGVG 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            M  +   A  +  +      + W P   S E             +   + +TE   G+D
Sbjct: 88  FMLHNDVVAPYLIKLANEEQKQRWLPGFCSGE-------------LITAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I ++  K  D  + L+G K F+++ + +D  I++A  +   G      L+ +    G
Sbjct: 135 LQNIKTRAVKDGDH-WILNGAKTFITNGINADLVIVVACTDPDKGAQGFSLLVVERGMEG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
               R  +KIG ++  T EL F++        L     G +  M+ L    L  A+++ +
Sbjct: 194 FERGRNLDKIGLKAQDTAELSFTDVRVPAENLLGEEGMGFIYLMQNLPQERLSIAVVAAA 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M   L   I Y R R   G  +      +  +A++A +  A   L  +     +  K  
Sbjct: 254 AMESCLDMTIQYCRDRKAFGKSIGSFQNTRFVLAELATETTAVRVLVDKFIEQLNAGKLS 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA A+        W  +    +I   ++  GG GY+ E  IA+ Y +S   +I  G+
Sbjct: 314 VQEAAMAKW-------WTTEAQVKLIDRCLQLHGGYGYMREYPIAKAYMDSRVQTIYGGT 366

Query: 447 GNAMVLDVLNLLEKG 461
              M   +   L  G
Sbjct: 367 TEIMKEIIGRGLNLG 381


>gi|304311065|ref|YP_003810663.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796798|emb|CBL45010.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 606

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 175/483 (36%), Gaps = 60/483 (12%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
               ++   +D L      A  P             V+    +E A+        L+   
Sbjct: 7   PLRDIDFVLNDLLDYQGHYAKLPGGADAT-----PDVVDAIIKECAKFCEEVLAPLNQTG 61

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G  W+  KV     +     + +  G         +       +  +  A     A 
Sbjct: 62  DSEGAHWNDGKVTTPKGFKEAYDQFVAGGWQSLSHPVEYGGQGLPLSLSVVKAEFVGTAN 121

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              G     ++ + + + L  T +  + +  K+ + E+  T             + LTE 
Sbjct: 122 WSWGMYPGLAIGAMNTILLHGTEQQKQTYITKLITGEWSGT-------------MCLTEP 168

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
           + GTD+  + ++ +  +DG Y ++G K F+S    D       I+LA++         + 
Sbjct: 169 QCGTDLGQVKTRAEPNADGSYSITGTKIFISGGDHDLTDNIVHIVLARLPDAPAGTRGIS 228

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP+   D     G  N +    +++K+G +++AT  + F    G+L+G  N     +
Sbjct: 229 LFIVPKHRPDAAGNTGEFNNVHCGSIEHKMGIKASATCVMNFEGATGYLIGPPNKGLQCM 288

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG--------ILIDQPVMKR 357
                   + +++  +    ++   A+ YA+ R     +SG          LI    ++R
Sbjct: 289 FTFMNTARVGTSVQGLGCSELAYQGALPYAKERLSMRALSGKTAPDKVADPLISHGDVRR 348

Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +           A+ +  A   D        + R     +   M PI K +  +     
Sbjct: 349 MLLTQKAFAEGGRAMIYYAAKIADYMMAGETQEDRDAADDHLGFMTPILKAFLTETGLES 408

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468
               M+  GG GYI+E  + +  R++  +++  G+     LD+L    LL+KG + F + 
Sbjct: 409 ANIGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGIQALDLLGRKILLQKGKS-FRKF 467

Query: 469 FST 471
            + 
Sbjct: 468 SAE 470


>gi|226357335|ref|YP_002787075.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319325|gb|ACO47321.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 611

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 98/492 (19%), Positives = 183/492 (37%), Gaps = 73/492 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGE-------RWDKVEFHPAWHALLRRSIHDGL 115
             +++   +E AR       +L      G+           V     + A  R+    G 
Sbjct: 39  ADLMTQVLEEAARFVET---ELVPLNRVGDQEGCTRDEQGNVTTPTGFKAAYRKYREAGW 95

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKD 173
                D ++        H +    + +M        M P ++  +  AL    +  +   
Sbjct: 96  TALDADPAYGGQGMP--HLVSNMLVEMMCSANVAWSMYPGLSHGAYSALHAVGSDELKNL 153

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PKI S E+  T             + LTE   GTD+  I ++     DG Y ++G K 
Sbjct: 154 YLPKIVSGEWTGT-------------MCLTEPHAGTDLGMIRTRATDNGDGSYSVTGTKI 200

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+   D       ++LA++EG       +  F+VP+ +       G  NG+    L++
Sbjct: 201 FISAGEHDMADNIVHLVLARLEGSPEGTKGISLFVVPKFVPSAEGGVGERNGVVCGSLEH 260

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  L F    G+L+G++N     +  M     L + +  +     +   A+ 
Sbjct: 261 KMGIHGNATAVLNFDGAKGWLVGEVNKGMNHMFIMMNAARLGTGLQGLGLGEGAYQNALV 320

Query: 338 YARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLA------NSFD 381
           YA+ R                +I  P ++R +        A  AL+  LA      +   
Sbjct: 321 YAKDRIQMRHTPRVSSEPADPIIVHPDVRRMLLTGKAYTEAGRALAMWLALSIDTEHHHP 380

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   R E A    ++ PI K +       V  ++ +  GG GYI+E  + +  R++    
Sbjct: 381 DEARRKEAADLVALLTPIAKAFMTDNGFHVAVQSQQIYGGHGYIQEWGMEQFVRDARIGQ 440

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD+L                +  D G   +K+   L++     ++D+ + 
Sbjct: 441 IYEGTNGIQALDLLG-------------RKVLMDGGKKLQKLAGTLQEFAEAHEDDEHIG 487

Query: 502 RFLTEKIALASS 513
            ++  ++  A+ 
Sbjct: 488 EYVN-QLGKAAQ 498


>gi|221235191|ref|YP_002517627.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|220964363|gb|ACL95719.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 386

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    L       GLH    +  F  +      H +    +   +   
Sbjct: 34  PIAAKIDETNSFP--RELWVPMGDLGLHGITVEEEFGGLGLGYLEHVVAMEEVSRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + PK+ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQIRRWATPEQKARYLPKLISGEH-------------VGSLAMSEAGA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +++ D         W  ++P +D  ++ A+     G   +   + +   
Sbjct: 139 GSDVVSMKLRAEQVGDRYILNGTKFWITNAPHADTLVVYAKT--GEGSRGITAFIVEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        +    G V  +   +  + A+++   
Sbjct: 197 KGFSVSKKLDKMGMRGSDTAELVFEDCEIPEENVMGPVGGGVGVLMSGLDYERAVLAAGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R R   G  +    +M+  IAD+ + + +A A  + +A + D  K
Sbjct: 257 LGIMQACLDVVLPYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGK 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   +AA A +MA        + A  V  EA++ +GG+GY +E  + R  R++    I  
Sbjct: 317 TTRFDAAGAILMA-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGA 369

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+       +   L  G
Sbjct: 370 GTNEIRRFLIGRELIGG 386


>gi|302344548|ref|YP_003809077.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641161|gb|ADK86483.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 380

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 133/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  E+W++    P  AW  L       G  C      +  +     + +           
Sbjct: 27  PNVEKWEEAGITPKEAWLKL----GEQGFLCMDVPEEYGGLGADFLYSVIVNEEMARTNH 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S   A  +    +  + +   PK  S EY                + +TE  
Sbjct: 83  TGLAVGLHSDVVAPYITAYGSEEIKQRILPKCISGEY-------------IAAVAMTEPN 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLED 264
            G+D+A I +  Q+  D +  ++G K F+S+ ++    ++A  +   +     +   + +
Sbjct: 130 TGSDLANIRTTAQQDGD-MVVINGQKTFISNGINCGVCVVAAKDPAEKDPYKAIDLFVVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G    R  NKIG  S  T EL F++    +   L     G +  M+ L    L   
Sbjct: 189 ADAPGFEKGRKLNKIGWHSQDTAELYFTDCRIPVGNRLGDKGAGFIMLMQKLQQERLICG 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +V+   V L   I Y + R   G  +      +  + ++A ++        +      
Sbjct: 249 IGAVAAAEVILERTIAYCKERSAFGKPISKFQNTQFELVEMATEVKLGRLFVDKCIADHM 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E KS   E +         KYW  +M   V    ++  GG GY EE  IAR +R+    S
Sbjct: 309 EGKSLPAEVSML-------KYWTTEMVKNVADRCLQLHGGYGYCEEYPIARAWRDVRVMS 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M       +
Sbjct: 362 IFAGTNEIMKTIAAKFM 378


>gi|167570773|ref|ZP_02363647.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 596

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 172/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKEAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSSYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L     +  G  + + +   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTVRDGGAVAKAIVGEIRQTVEALGA 478

Query: 479 SGKKVITILRDSIS 492
                   ++  ++
Sbjct: 479 HDGPAFAAMKTQLA 492


>gi|187927232|ref|YP_001897719.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780069|ref|ZP_07674821.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724122|gb|ACD25287.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921101|gb|EFP66746.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 376

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 136/394 (34%), Gaps = 31/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     +  A  P    WD+    P    + R+    G +              
Sbjct: 7   QEMIRDAIRTFVR-EAIAPHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEELGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+         + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMLMAFANDAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D        ++  S   +D  I++A  
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDHWVLNGVKQFITSGKHADVAIVMAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   L   +  G    RL++K+G  S+ T ++ F +        L       
Sbjct: 171 DKTAGKRGISAFLVPTNTPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLGEEGAGY 230

Query: 310 EDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +    L  L+   + ++   V +       A+ YA+ R   G  L     ++  +A++A 
Sbjct: 231 K--MALSGLEGGRIGIAAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A  + +  A+  D      +EAA A       K    +MA  V ++A++  GG GY
Sbjct: 289 RVDVARQMVWHAASLKDAGLPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|240171618|ref|ZP_04750277.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium kansasii ATCC 12478]
          Length = 389

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 123/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PYAADVDENSRFP--QEALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P +                +      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSEDLKKQVLPSL-------------ADGTAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRAKADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGISAFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFTVGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGSGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYTAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GEQN------LGFISAASKCFASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|16126411|ref|NP_420975.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13423669|gb|AAK24143.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15]
          Length = 378

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P    L       GLH    +  F  +      H +    +   +   
Sbjct: 26  PIAAKIDETNSFP--RELWVPMGDLGLHGITVEEEFGGLGLGYLEHVVAMEEVSRASASV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + PK+ S E+                L ++E   
Sbjct: 84  GLSYGAHSNLCVNQIRRWATPEQKARYLPKLISGEH-------------VGSLAMSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +++ D         W  ++P +D  ++ A+     G   +   + +   
Sbjct: 131 GSDVVSMKLRAEQVGDRYILNGTKFWITNAPHADTLVVYAKT--GEGSRGITAFIVEKGM 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        +    G V  +   +  + A+++   
Sbjct: 189 KGFSVSKKLDKMGMRGSDTAELVFEDCEIPEENVMGPVGGGVGVLMSGLDYERAVLAAGP 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   + Y R R   G  +    +M+  IAD+ + + +A A  + +A + D  K
Sbjct: 249 LGIMQACLDVVLPYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   +AA A +MA        + A  V  EA++ +GG+GY +E  + R  R++    I  
Sbjct: 309 TTRFDAAGAILMA-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGA 361

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+       +   L  G
Sbjct: 362 GTNEIRRFLIGRELIGG 378


>gi|254719359|ref|ZP_05181170.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. 83/13]
 gi|265984360|ref|ZP_06097095.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839133|ref|ZP_07471950.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. NF 2653]
 gi|264662952|gb|EEZ33213.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306405680|gb|EFM61942.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. NF 2653]
          Length = 385

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 143/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDTVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +       V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTGFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|319764491|ref|YP_004128428.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330826707|ref|YP_004390010.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119052|gb|ADV01541.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312079|gb|AEB86494.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 396

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 134/374 (35%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +    +   AH +    +   +   
Sbjct: 35  PRATEIDRTDQFPM--DLWRKFGELGVLGITVPEQYGGADMGYLAHMVAMEEISRASASV 92

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 93  GLSYGAHSNLCVNQINRNGNEAQKAKYLPKLISGEH-------------VGALAMSEPGA 139

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +             W  + P +D  ++ A+ E  +G   V   L + S 
Sbjct: 140 GSDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKSM 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G  + +   +  + A+++   
Sbjct: 200 KGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENVLGQVNGGAKVLMSGLDYERAVLTGGP 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  +AD+   + A  + ++ +A + D   
Sbjct: 260 LGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDM-- 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              E     R        WC + A  +  E ++  GG+GYI E  + R +R++    I  
Sbjct: 318 LGIEHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAKLYEIGA 377

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 378 GTSEIRRMLIGREL 391


>gi|312963448|ref|ZP_07777930.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
 gi|311282254|gb|EFQ60853.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6]
          Length = 589

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/498 (19%), Positives = 178/498 (35%), Gaps = 55/498 (11%)

Query: 55  HKELELLGE-----YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHAL 106
           H     LG       ++S   +E A+        L+      G  +D   V     +   
Sbjct: 22  HGHYAALGATDASPDMVSAILEEGAKFCENVLSPLNRSGDEEGCHFDNGVVTTPKGFKEA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             + +  G H    D ++      Q+  +  + +   +    G     +  + S +    
Sbjct: 82  FAQYVEGGWHGVAADPAYGGQGLPQSLGLVLSEMIGSSNTSWGMYPGLTHGAMSAIHAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      +  K+ + E+  T             + LTE   GTD+  I ++    +DG Y
Sbjct: 142 TVEQKDTYLNKLTAGEWTGT-------------MCLTEAHCGTDLGLIKTRAVPQADGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-GSPNGLCYQR 274
            ++G K F+S+   D       ++LA++         +  F+VP+   D G  N +    
Sbjct: 189 AVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKFHADSGERNAVHCGA 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  L F    GFL+G+ N     +  M     L + +  +     S   
Sbjct: 249 IEHKMGIKASATCVLNFDGAKGFLIGEANKGLNCMFTMMNHARLGTGMQGLCNGEASFQG 308

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           AI YA  R                  +I    ++R +  +        AL++  A   D 
Sbjct: 309 AIKYANDRLQMRSLTGAKAPDKAADPIIVHADVRRMLLTMKAFNEGNRALTYLTAQLLDT 368

Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A        R E       + PI K +  +    V    M+  GG GYI E  + +  R+
Sbjct: 369 AHLSSDAGQRQEAEDLLAFLTPICKAFMTETGLEVTNHGMQVFGGHGYIREWGMEQLARD 428

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+     LD+L     G    L       + +   ++ + V   L+  ++  
Sbjct: 429 ARIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAANAEHV--QLKSYVAQL 486

Query: 495 KEDKGLARFLTEKIALAS 512
            +       LT ++ +A+
Sbjct: 487 NQLNQQWGELTTQVGMAA 504


>gi|319795998|ref|YP_004157638.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598461|gb|ADU39527.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 376

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 86/392 (21%), Positives = 153/392 (39%), Gaps = 27/392 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE  R A  +  Q   + P   +WD+    P       +  H GL       ++   V +
Sbjct: 7   QEAIRDAVRDFSQAELW-PNAPKWDREHSFP-------KEAHQGLAALG---AYGICVPE 55

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +        L L   LE         ++A  V       +   +      +++      P
Sbjct: 56  EHGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKKWLE----P 111

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQV 249
           + +  +     LTE + G+D +++ +  +K +DG Y + G K F++S  +    I++A  
Sbjct: 112 LAQGQMLGAFCLTEPQAGSDASSLRTTARKDADG-YVIDGVKQFITSGKNGQVAIVIAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +   G   +   +      G    RL++K+G  S+ T ++ F         L+G      
Sbjct: 171 DKGAGKRGMSAFIVPTDAPGYAVARLEDKLGQHSSDTAQINFDGCRIPAENLIGAEGEGY 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                      +  A  SV   R +   A+ YA+ R   GG + DQ  +   +A+ A  I
Sbjct: 231 KIALGALEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +  A+  D      +EAA A       K +  +MA  V + A++ +GG GY+ 
Sbjct: 291 EAARQLIWHAASLRDAGLPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGYVN 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R YR+     I  G+ +   L +   L
Sbjct: 344 DFPLERIYRDVRVCQIYEGTSDIQKLLIQRAL 375


>gi|226311664|ref|YP_002771558.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis
           NBRC 100599]
 gi|226094612|dbj|BAH43054.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus
           brevis NBRC 100599]
          Length = 379

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 142/378 (37%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+ +  P    + ++     L    +   +        +  I    L       
Sbjct: 26  PEADERDQTKQFPVG--IFKQMSELNLMGLPFSEKYGGAGADSTSFAIVVEELSRACGST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +      + +AL  T     ++  KI S E                  GLTE   
Sbjct: 84  GITYSAHISLGGAPLALFGTEEQKLNYLSKICSGE-------------SFGAFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGS 266
           G+D     +    ++DG + ++G K F+++    +F+ L A  +   G   +   +    
Sbjct: 131 GSDAGGTRTNAI-LADGEWTINGSKCFITNASYASFLALTAVTDKEQGSRGITAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G        K+G  S+ T EL   N       + NV     E  K  LI LD   + +
Sbjct: 190 TPGFQVLANYEKLGLHSSNTTELVLENVRVP---EENVLGKRGEGFKQFLITLDGGRIGI 246

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M V +A+A +     Y+++R   G  L     ++  +AD+A+ I  A  + ++ A   
Sbjct: 247 GAMAVGIAQAAYDKALQYSKQRTAFGNSLSHFQAIQHKLADMAMHIELARTMVYKAAWLK 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  ++EAA A       K +  ++A +   +A++  GG GY+ E  + R +R++   
Sbjct: 307 DHGRKFTKEAAMA-------KLYASEIAMSATHQAIQIHGGYGYMREYQVERFFRDARLL 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   +   +   +
Sbjct: 360 EIGEGTSEILRNVIAREI 377


>gi|94496861|ref|ZP_01303435.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58]
 gi|94423537|gb|EAT08564.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58]
          Length = 600

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 101/568 (17%), Positives = 194/568 (34%), Gaps = 74/568 (13%)

Query: 12  MNQVHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN     +G++ Y   + L +  A  P +V   L   G  V +   
Sbjct: 1   MPSYAAPIRDTRFVLNHV---VGLDRY---ANLPSFAAASPDLVEAILTE-GGKVAAEIL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             L    +            G     V     +     + +  G         F      
Sbjct: 54  FPLNASGDKEG---CTRNSDG----SVTTPAGFKDAYDQYVAGGWTTLHAPEEFGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
               +  A    M        M   +T+ ++ AL    +      + PK+ S E+  T  
Sbjct: 107 --MVVATALGEYMTSANQAFEMYFGLTTGAISALLAKGSSEQQHRYIPKMVSGEWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243
                      + LTE   GTD+  I ++     DG Y ++G K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLIKTKAVPQGDGSYAITGTKIFISAGEHDLADNIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA+          +  F+VP+++          N +    +++K+G   NAT  + + 
Sbjct: 212 LVLAKTPDAPEGSKGISLFVVPKIMVGDDGALSDRNAVSCGSIEHKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+++G+ N     +  M     L   +  +    V+   A+HYA+ R          
Sbjct: 272 GATGWMVGEENKGLAAMFIMMNAARLGVGLQGLGQAEVAFQNAVHYAQDRRQGRALTGPK 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYAR 394
                   L   P ++R + +         AL+   A   D        + R       +
Sbjct: 332 EPEEKADTLFVHPDVRRMLMEAKALTEGLRALTLWTAVQVDLSHYAETEEERQAADDLLQ 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K +       V   A +  GG GYI E  + ++ R++    I  G+     +D+
Sbjct: 392 LLTPVVKGYGTDKGFDVAVSAQQVFGGHGYIWENGVEQYVRDARIAQIYEGTNGIQAMDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIAL- 510
           +   L   G    +     + +++ ++   + I  + +++       G A     + A+ 
Sbjct: 452 VGRKLPMHGGRALQAFLKLVNEEVAAAKSDESIAPIAEALEKASGQLGAATMWLMQNAMK 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRF 534
               A + A  Y   +  +A   +  R 
Sbjct: 512 NPDNAGAGAHHYMHILGIVATGLMWLRM 539


>gi|584714|sp|Q07417|ACADS_MOUSE RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|192659|gb|AAA16714.1| short chain acyl-CoA dehydrogenase [Mus musculus]
          Length = 412

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 141/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P   A +++    GL                     A      A    
Sbjct: 55  PIAAQLDREHLFPT--AQVKKMGELGLLAMDVPEELSGAGLGYLAYSIALEEISRACAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   + +  + W               P           L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSAQQKQQWI-------------TPFTNGDKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  ++  D         W  +S  + A ++ A  +       +   L     
Sbjct: 160 GSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA  R+  G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  ++E+A  ++ A        + A A+  +A++ +G  GY+ E    R+YR++    
Sbjct: 337 NKKPFTKESAMRKLAA-------SEAATAISHQAIQILGSMGYVTEMPAERYYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|229592985|ref|YP_002875104.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229364851|emb|CAY52900.1| putative dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 601

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 88/484 (18%), Positives = 173/484 (35%), Gaps = 63/484 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDIEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGAANWSWGMYPGLSHGAMNTISEHGTPEQQTAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    L++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADGSIGERNAVTCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  +S   +     + YAR R  
Sbjct: 264 ATCVMNFDAATGFLIGPANKGLNCMFTFMNTARLGTALQGLSHAEIGFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + +++
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGTDDEAK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KHADGLLAFMTPIAKAFMTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQANEGNEAVKEFVTP 490

Query: 507 KIAL 510
             AL
Sbjct: 491 LAAL 494


>gi|258648036|ref|ZP_05735505.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC
           51259]
 gi|260851889|gb|EEX71758.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC
           51259]
          Length = 575

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 90/484 (18%), Positives = 175/484 (36%), Gaps = 56/484 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+++G+   +  A + A   +   P            D+V +       +   +  G++ 
Sbjct: 55  LDIVGDIAGTTVA-DNAEGVDLEGPHHEG--------DRVRYASGTEKNMEAMVKAGMNG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +          A L   +     ++ S        +        H  + P+
Sbjct: 106 MTMPRRFGGLNFAITPYTMCAELVAASDPGFSNIWS-LQDCIETLYEFGNEDQHSRFIPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLS 236
           +                   + + LTE   G+D+  +  +      DG + L+G K F++
Sbjct: 165 VCEG--------------ATMSMDLTEPDAGSDLQRVMLKATYSEKDGCWLLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +D  ++LA+ E G      +   + D    G+  +R++NK+G   + T EL + N  
Sbjct: 211 NGDADIHLVLARSEEGTTDGRGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAH 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  E + YA  R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGISQAAYNEGLAYAADRQQFGKPIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD-----------------EAKSRSEEAAYARIMA 397
           +   +A +   + A  AL ++ +   D                 E K + E A  A  + 
Sbjct: 331 VYDMLALMKAKLDAGRALLYQCSRYVDLYKALEDISRERKLEADERKEQKEYAKLADSLT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     ++++  GGSG++ +  I R YR++   SI  G+    V+  +  
Sbjct: 391 PLAKGINSEYANQNTYDSIQIHGGSGFMLDYPIQRFYRDARITSIYEGTTQLQVVAAIRY 450

Query: 458 LEKGTNLF------EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL------ARFLT 505
           +  G+ L       +   S   + +    + +      ++   K  +        AR L 
Sbjct: 451 VTNGSYLKQMRDFEQAEVSEALRPIQERARAMADTFAAAVDHVKAMESQEALDFCARHLV 510

Query: 506 EKIA 509
           E  A
Sbjct: 511 EIAA 514


>gi|306844215|ref|ZP_07476808.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1]
 gi|306275490|gb|EFM57227.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1]
          Length = 385

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 144/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +   M   V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDMGFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|254427010|ref|ZP_05040717.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193179|gb|EDX88138.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 604

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 90/490 (18%), Positives = 172/490 (35%), Gaps = 55/490 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSIW 120
            ++     E+A++       L+      G +  D V   P  +       +  G      
Sbjct: 37  DMVEAIVGEMAKLCENTIAPLYQSGDEEGCKLEDGVVTTPKGFKEAYDEFVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                      +  +    +   A          S+ + + + +  T + H+D+   +  
Sbjct: 97  PVEVGGQGLPMSLGLIKQEMMATANWSFSMYPGLSLGAMNTIQMHGTEQQHQDYLVPLTE 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS   
Sbjct: 157 GTWGGT-------------MCLTEPQCGTDLGQVKTKAEPQKDGSYKISGTKIFISSGDH 203

Query: 241 D-----AFIMLAQ-VEGRVGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATV 287
           D       I+LA+  +   G   +   +         G  NG+    L+ K+G +++AT 
Sbjct: 204 DLTENIVHIVLARLPDAPKGTKGISLFIVPKYLPGKIGEDNGVSCGSLEKKMGIKASATC 263

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---- 343
            + F    GFL+G  +     +        + +A+  V+   +S   A+ YA+ R     
Sbjct: 264 VINFDEATGFLIGPEHGGLECMFTFMNSARIGTAMQGVAHAELSYQGALPYAKERKSMRA 323

Query: 344 VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--- 392
           +SG          LI    ++R +           A+ +  A   D   +   E      
Sbjct: 324 LSGKKEPDAIADSLIHHGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMKKY 383

Query: 393 ------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  +       E M+  GG GYI+E  + +  R++  +++  G+
Sbjct: 384 EHWDSELGFLTPILKGFLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGT 443

Query: 447 GNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L    LL        +    L  D G+   +    LR       +      +
Sbjct: 444 TGIQALDLLGRKVLLSSRGKCVREFSKKLV-DFGTKNLRD-PKLRPFAWKLLKIAAEWNY 501

Query: 504 LTEKIALASS 513
           LT +I L ++
Sbjct: 502 LTTRIMLVAA 511


>gi|119494950|ref|XP_001264273.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119412435|gb|EAW22376.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 437

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 138/381 (36%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      AL+ +    GL        +          I A       
Sbjct: 76  EQIGPKVREMDESEVMD--PALVEQLFEQGLMGIEIPEEYGGAGMNFTSAIVAIEELARV 133

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +          + K W PK+               T       L+
Sbjct: 134 DPSVSVLVDVHNTLVNTAFNKWADAALKKTWLPKL--------------ATDTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  F++ A ++   G   +   + 
Sbjct: 180 EPASGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFVVFANLDPSKGYKGITAFVV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    G    + + K+G R+++T  L F +     G LLG+          +     +  
Sbjct: 240 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGI 299

Query: 321 AIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           A         +   A  Y    R   G ++     M+  +A   ++IAAA AL +  A  
Sbjct: 300 AAQMTGLALGAWENAASYVWNDRRQFGQLIGTFQGMQHQLAQAYVEIAAARALVYNAARK 359

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K++  ++A  V + A+E +GG G++ E    + +R+S  
Sbjct: 360 KEAGQDFVQDAAMA-------KFYASQVAGRVASSAVEWMGGMGFVREGIAEKMFRDSKI 412

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 413 GAIYEGTSNIQLQTIAKLLQK 433


>gi|330820005|ref|YP_004348867.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327372000|gb|AEA63355.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 377

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 134/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    GL   +    ++           A           
Sbjct: 26  PNAAQWDREGALPD--RVVAQMGELGLLGMVVPAEWDGSYTDYTAYALAVEEIAAGCASC 83

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             LMS  +      +    T      W  ++ S               +     LTE + 
Sbjct: 84  ATLMSVQNSVCCGPILNYGTDAQRDRWLRELASG-------------RMVGSFCLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++     DG + L+G K F+S+   +   I+ A  +   G   +   +    
Sbjct: 131 GSEANNLRTRAVLQ-DGRWVLNGSKQFISNASRAGVAIVFAMTDPEQGKRGLSAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G    + + K+G R++ T  +   N     + + N+     E +KI +       +  
Sbjct: 190 TPGFNVGKPEKKLGIRASDTCPITLENC---AIPEENLLGARGEGLKIALANLEGGRIGI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +  +A  YA  R   G  + +   +   +AD+A  + AA  L    A   
Sbjct: 247 AAQAVGIARAAFDKARRYAAERTQFGKPIKEHQAIAEKLADMATQLNAARLLVHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E      E       A   K +  +MA  V ++A++  GG GY+ +  + RHYR++   
Sbjct: 307 TEGLPCLSE-------ASQAKLFASEMAEKVCSDAIQVHGGYGYLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|229173035|ref|ZP_04300586.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
 gi|228610368|gb|EEK67639.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3]
          Length = 569

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAQNVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTVVEVDVANVERNHRYILLSKKLLKQSLKTLSKTPGL 455


>gi|218663554|ref|ZP_03519484.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli IE4771]
          Length = 591

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/507 (18%), Positives = 184/507 (36%), Gaps = 58/507 (11%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L       G R    +V     W  L R  I  G + 
Sbjct: 31  LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLIEGEVRLPDGWRELYRSWIAGGWNG 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                +F          + A  ++    +      + ++ +   V+   +  +   +  K
Sbjct: 91  LTAPEAFGGQALPDMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALKDKYLAK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE   G+D+  + ++ ++ +DG Y + G K F++ 
Sbjct: 151 MVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITW 197

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              DA      ++LA++         +  FLVP+ L +     G+ N L    L++K+G 
Sbjct: 198 GEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + T  + + +          G+L+G+ N     +  M     L   +  V+    +  
Sbjct: 258 HGSPTCTMIYGDGRFGDEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAISEAATQ 317

Query: 334 EAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
           +A+ YAR R               +++ P + R +  +      + A+S+  A + D   
Sbjct: 318 KALAYARERTQGRAPGSTGVGMSPIVEHPDVARMLLTMKALTQGSRAISYACAQALDMSR 377

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A         A ++ PI K +       V +  ++  GG G+IEE   AR+ R++    
Sbjct: 378 RAGDNRHWQERAALLTPIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAP 437

Query: 442 ILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC----K 495
           I  G+       L    L   G +      + L+    + G+  +    ++ +       
Sbjct: 438 IYEGTNGIQAIDLVTRKLPLSGGDQVMGFIAELKAIAEAVGRSNLDGFGETAARLGAAIS 497

Query: 496 EDKGLARFLTEKIALASSAAALYRAGM 522
           +      +L   +A   +A AL  A  
Sbjct: 498 DLDAATAWLLRALADGRAAEALAGATP 524


>gi|188583773|ref|YP_001927218.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179347271|gb|ACB82683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 587

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/489 (19%), Positives = 188/489 (38%), Gaps = 53/489 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAW 103
           +A   +V+ +    +G        +E  R A      L+      G  +    V   P W
Sbjct: 17  VAGLDAVLAQNGAEIGPDDAGAILEEAGRFAGNVIAPLNRVGDRHGTPFSDGTVTTAPGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R  +  G +  +             H I AA   +         + P +T+  + A
Sbjct: 77  RDAYRAFVEGGWNGVLAAPDHGGQGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGIEA 134

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    +  +   +  K+ S E+                + LTE + G+D++A+ ++ +  
Sbjct: 135 LAAHGSDGLKGRYLEKLVSGEW-------------TATMNLTEPQAGSDLSALRTRAEPR 181

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K +++    D       ++LA+++        +  FLVP++L DG+ N L
Sbjct: 182 GDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPAGTRGISLFLVPKVLPDGTRNDL 241

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G  ++ T  + F +     G+L+G+ N     +  M     L+  +  V  
Sbjct: 242 RCSGIEHKLGIHASPTCSMAFGDGGGATGWLIGEENRGLACMFTMMNSARLNVGLQGVGV 301

Query: 328 MRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              ++    ++R +  +    AA+  + +  A +
Sbjct: 302 AEAAYQKALDYARERRQGRAPGAPEPVSAIVAHADVQRMLLTMKAYTAASRGICYLTAQA 361

Query: 380 FDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++
Sbjct: 362 LDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMRDA 421

Query: 438 PANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFST------LEQDLGSSGKKVITILR 488
               I  G+     +D++     L  G  +  Q+ S       L +D           LR
Sbjct: 422 RILGIYEGTNGIQAIDLVTRKLPLADGATVGAQIASMRRVAEGLLKDGAPGFGHAAPRLR 481

Query: 489 DSISLCKED 497
           + I      
Sbjct: 482 EGIGSLDRA 490


>gi|55377902|ref|YP_135752.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230627|gb|AAV46046.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 385

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 147/398 (36%), Gaps = 33/398 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            E+AR A           P    +D  E  P    ++ ++   GL  +     +      
Sbjct: 14  DEIARFAENE------IKPVATEYDTEEKFP--REIVEKAAEMGLTGANIPMEYGGAGYD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                  A     A    G  +  +   A  +    +    +++               P
Sbjct: 66  TLTNAIIAEELFAADPGIGLSIQSAAFGADALIGFGSEAQKEEYLE-------------P 112

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           +      +G  ++E   G+D++++++Q +K  D         W  +  + D F++L + +
Sbjct: 113 VATGDAIMGAAISEPDTGSDVSSVSTQARKDGDEWVINGNKMWITNGSVGDYFVVLCETD 172

Query: 251 GRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
                      ++L +   +G   +++  K+G R++ T EL  ++        +     G
Sbjct: 173 PDAEGRYNGFSQILIESDRDGFEAEKITGKLGIRASDTAELILNDVRVPEDNLVGTRGAG 232

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            ++ M+         A   V   R +   A+ YA+ R   G  + +    +  +A++  +
Sbjct: 233 FLQIMQFFDETRTGVAAQGVGIARGAAERALEYAQDREQFGQSISEFQATQHKLAEMFTE 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L+ + A S D       +A     +A + K    ++A     EA++  GG+GY+
Sbjct: 293 IEAARQLTHKSAWSVDN------DADKLTQLASMAKEKASRVAVETADEAVQIHGGAGYV 346

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGT 462
            +  + R YR++    I  G+       +   LL KG 
Sbjct: 347 NDFDVERFYRDAKITQIYEGTTEIQKNIIARELLGKGM 384


>gi|254718592|ref|ZP_05180403.1| Acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265983568|ref|ZP_06096303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|264662160|gb|EEZ32421.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
          Length = 592

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 90/551 (16%), Positives = 192/551 (34%), Gaps = 66/551 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +     AA ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQDDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF----LDNCHSTHCMLHGRFN 550
            +    AR  T+ +      A         ++      R         +     L G   
Sbjct: 497 SKAISEAREATDWL----QKATAKGRAEEALSGATPYQRLLSLTAGGAYLARAALAGDDA 552

Query: 551 AAHIIDSLYLD 561
           A  ++   + +
Sbjct: 553 ARAVLCRFFAE 563


>gi|320353823|ref|YP_004195162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
 gi|320122325|gb|ADW17871.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 386

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 136/380 (35%), Gaps = 29/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D  +  P   A L++    G         +            A      A    
Sbjct: 26  PVAAKLDAEKDRPTLLANLKKLAELGFMGLNVKEEYGGSEAGVVSFSVAMTEIARACAST 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S +     ++  + +      + PKI S EY             A   GLTE   G
Sbjct: 86  AVTVSVNNMVCEVIQAIGSEEQKSKYIPKICSGEY------------AAGSFGLTENCAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +D + + +   K  D         +  S+P +  F++ A  +        +   L +   
Sbjct: 134 SDPSGMCTTATKDGDSYVLNGSKIFITSAPYAGVFVVWAVTDKEAPRGKGISCFLIEAGT 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            GL   + ++K+G  ++AT EL F N              P +  +I +  L    + + 
Sbjct: 194 PGLTIGKEEHKMGQHASATNELIFDNCRVPASAM---MGKPNDGFRIAVAELAGGRIGIG 250

Query: 327 GMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +       ++  A  YA  R      + +   ++  IAD   ++ AA  L    A   +
Sbjct: 251 SLGLGIGLAAMDYAAKYANERQQFCQKISNFQAIQWMIADSYTELEAARLLLMNAAFRKE 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  ++EA+ A++       +  + A      A++ +GG GY ++  I R+ R++   +
Sbjct: 311 QGRPFAKEASMAKM-------YATESANRACYNALQMLGGYGYTKDFPIERYARDARITT 363

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   + +G
Sbjct: 364 IYEGTSEIQRLIISREILRG 383


>gi|84498103|ref|ZP_00996900.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84381603|gb|EAP97486.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 392

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 144/364 (39%), Gaps = 32/364 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            HD L  S +   F P V ++   + A  L     +E       S +    V  + +   
Sbjct: 48  AHDALVASDF---FAPHVGEEYGGVGADALATCIVIEEVARACASSSLIPAVNKLGS--- 101

Query: 171 HKDWAPKIFSR--EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI---SDGI 225
                P I     E       P+     +   GL+E+  G+D A++  + +      D  
Sbjct: 102 ----MPVILGGNEEIKRKYLTPLAAGETSFSYGLSEREAGSDTASMKCRAKLDKSAGDDS 157

Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           + L+G K W  ++ +SD + +LA  +        +   + + S  G  +   + K+G + 
Sbjct: 158 WVLNGQKSWITNAGVSDYYTVLAVTDPDGTRGNNISAFVVEKSDEGFTFGEKERKLGIKG 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIH 337
           + T EL F N     +    +   P E +KI +  LD   +++    V +A+     A+ 
Sbjct: 218 SPTRELIFDNVR---IPGDRIIGAPGEGLKIALRTLDHTRVTIGAQAVGIAQGALDHALA 274

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  + +   ++  +AD+A+++ AA  + +  A   +         A      
Sbjct: 275 YVKERKQFGKNIAEFQGIQFMLADMAMELEAARQMVYVAAAKSERGD------ADLSFFG 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +   +A  V  +A++ +GG+GY  +  + R  R++    I  G+     + +   
Sbjct: 329 AAAKCFASDVAMKVTTDAVQLLGGAGYTRDFPLERMMRDAKITQIYEGTNQVQRIVMARQ 388

Query: 458 LEKG 461
           L KG
Sbjct: 389 LLKG 392


>gi|217959850|ref|YP_002338406.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|229139044|ref|ZP_04267621.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|217065597|gb|ACJ79847.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|228644399|gb|EEL00654.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26]
          Length = 569

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 152/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++ +      + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEIEIDVENVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|160886528|ref|ZP_02067531.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483]
 gi|237723365|ref|ZP_04553846.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4]
 gi|260173358|ref|ZP_05759770.1| acyl-CoA dehydrogenase [Bacteroides sp. D2]
 gi|293373189|ref|ZP_06619551.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|299149419|ref|ZP_07042476.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23]
 gi|315921630|ref|ZP_07917870.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108413|gb|EDO10158.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483]
 gi|229447887|gb|EEO53678.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4]
 gi|292631837|gb|EFF50453.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298512606|gb|EFI36498.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23]
 gi|313695505|gb|EFS32340.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 568

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 101/484 (20%), Positives = 182/484 (37%), Gaps = 56/484 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE +        A   +   P    +   G    +VE+       L   +  GL+ 
Sbjct: 55  LEITGE-ITGEIIAANAEGVDEEGP----HCANG----RVEYASGTKQNLDAMVKAGLNG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +          A +   A    G++ S        +        H  + P+
Sbjct: 106 MTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-LQDCIETLYEFGNADQHSRFIPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLS 236
           +   E               + + LTE   G+D+ A+  +      DG + L+G K F++
Sbjct: 165 VCQGE--------------TMSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++  ++LA+ E G      +   + D +  G+  +R++NK+G   + T EL + N  
Sbjct: 211 NGDANLHLVLARSEEGTRDGRGLSMFIYDKNEGGVNVRRIENKLGIHGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  E + YA+ R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD-----------------EAKSRSEEAAYARIMA 397
           +   +A +   + A  AL ++ A   D                 E + + + A  A    
Sbjct: 331 VYDMLAIMKGKLDAGRALLYQTARYVDIYKALDDISRERKLTPEERQEQKKYAKLADSFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSG++ E +  R YR++   SI  G+     +  +  
Sbjct: 391 PLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRY 450

Query: 458 LEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRDSISLCKEDKGL------ARFLT 505
           +  G+ +     FE +  + E + L S  KK+      S +  KE +        AR L 
Sbjct: 451 VTNGSYIATIREFEAIPCSPEMEPLMSRLKKMADKFEASTNAVKEVQDQELLDFTARKLV 510

Query: 506 EKIA 509
           E  A
Sbjct: 511 EMAA 514


>gi|255941758|ref|XP_002561648.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586271|emb|CAP94019.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 436

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 143/384 (37%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E   A   ++ +    GL        F          I A       
Sbjct: 75  EQIGPKVREMDEAETMDA--KVVEQLFEQGLMGIEVPEEFGGAGMNFTAAIVAIEELARV 132

Query: 145 QLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T   + +      +  + W PK+               T       L+
Sbjct: 133 DPSVSVLVDVHNTLVNTAIMKYGDAKAQRTWLPKLT--------------TGTVGSFCLS 178

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 179 EPASGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFIVFANIDPSKGYKGITAFIV 238

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +    ++   N+     +  K  I  L+   
Sbjct: 239 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDC---VIPKSNLLGEEGQGYKYAISVLNEGR 295

Query: 323 MSVSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA      A  Y    R   G ++ +   M+  IA    +IAAA AL +  
Sbjct: 296 IGIAAQMTGLALGAWENAARYVWNDRRQFGELIGNFQGMQHQIAQAYTEIAAARALVYNA 355

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V + A+E +GG G++ E    + +R+
Sbjct: 356 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRD 408

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 409 SKIGAIYEGTSNIQLQTIAKLLQK 432


>gi|77463064|ref|YP_352568.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77387482|gb|ABA78667.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 385

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 142/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   R D+    PA   L R     GL        F    +   AH +    +   +   
Sbjct: 31  PMAARIDRENVFPA--ELWREMGELGLLGITVPEEFGGSDMGYLAHTVAVEEVARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  +P     + PK+ S E+                L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIRLNGSPEQKARYLPKLVSGEH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMKLKAEKRNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T EL F N         NV     + +++L+  LD       
Sbjct: 196 TGFSTSPHFDKVGMRGSNTGELIFENCEVPF---ENVLGQDGKGVRVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    M   L E + Y + R   G  + +  +M+  +AD+ + +  A A  +  A + D
Sbjct: 253 GIGTGIMAACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +AA           +  + A     +A++ +GG+G++ +  ++R +R++    
Sbjct: 313 AGRVTRADAAG-------CVLYASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L  G
Sbjct: 366 IGAGTSEIRRMLIGRELMAG 385


>gi|148652718|ref|YP_001279811.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571802|gb|ABQ93861.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 594

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 92/539 (17%), Positives = 192/539 (35%), Gaps = 68/539 (12%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHAL 106
            ++ L  +    ++   +E+A++       L      G+        D V   P  +   
Sbjct: 27  ANENLAHVDMDTVNMVLEEMAKLTKN---VLLPLNRTGDEEGATYQGDGVVTTPTGFKDA 83

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-M 165
            ++    G      D  +      +          +    +A  L       A++  L  
Sbjct: 84  FKQYAEAGWIGLGGDPEYGGQGFPK-MVTMLTEEMVFTVNQAFALYPNLSVGATLCLLAS 142

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    + +  K++S ++  T             + LTE   GTD+  I ++     DG 
Sbjct: 143 ASEEQKQTYLEKMYSGQWAGT-------------MCLTEPHAGTDLGIIKTKATPNEDGS 189

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNG 269
           Y +SG K F++    D       ++LA+          +  F+VP+ + +     G  N 
Sbjct: 190 YAISGTKIFITGGEHDLTENIIHLVLAKTPNAPEGSKGISLFVVPKFIVNADGSLGERNA 249

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L    +++K+G + +AT  + F    G+++G+ N     +  M     +   +  + G  
Sbjct: 250 LAAGSIEHKMGIKGSATCVMNFDGAKGWMVGEENTGLASMFVMMNYERVTMGLQGLGGTE 309

Query: 330 VSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
           ++   A  YA  R   G               +I    ++R + +   +  A+   +  +
Sbjct: 310 LAYQNAAAYALDRGQ-GRSDTQIQSPEKPADAIIHHADVRRMLLNARANAEASRCFAMYV 368

Query: 377 ANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   DE+K      +    AA   ++ PI K +    A     +  +  GG GYI E  +
Sbjct: 369 AKQLDESKFSIDPENAKAAAARVALLTPIAKAFLTDKALEATVDCQQVFGGHGYIREWGM 428

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +  R++  + I  G+     LD+L   +        E   + + +D  ++ K    I +
Sbjct: 429 EQIVRDTRISQIYEGANGIQALDLLGRKIARNNGQYLENFLAEI-RDFVANMKADHEIKQ 487

Query: 489 DSISLCKEDKGLARFLTEKIALASSA----AALYRAGMNDIADVFLENRFLDNCHSTHC 543
            +++  +  + L + +   I+   S     A  Y   M  +   F+    ++  H    
Sbjct: 488 ATLNAAETIEELTKTVLTNISTRKSEINGCAVDYLHAMGYLCYAFMFAMMVEAAHDKEG 546


>gi|86360109|ref|YP_471998.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284211|gb|ABC93271.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 381

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 140/377 (37%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    P    L  +    GLH    +  F         H +    +   +
Sbjct: 24  RIAPLAAEIDESNTFP--RQLWPQMGALGLHGITVEEEFGGAGLGYLEHVVAMEEVSRAS 81

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    +    +   PK+ S E+                L ++E
Sbjct: 82  ASVGLSYGAHSNLCVNQIRRWGSAEQKRRHLPKLISGEH-------------VGSLAMSE 128

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  ++P +D  ++ A+ +   G   +   + +
Sbjct: 129 VGSGSDVVSMRLRAEKRGDRYILNGAKFWITNAPHADVLVVYAKSDPAAGPKGISAFIIE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +  G    +  +K+G R + T EL F +        +      V+ +   +  + A+++
Sbjct: 189 KALPGFSVSKKLSKLGMRGSDTAELVFQDCEVPAEALMGREGEGVKILMSGLDYERAVLA 248

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  L   + Y R R   G  + D  +M+  IAD+ + + +A A  + +A + D
Sbjct: 249 GGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSARAYVYSVARACD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++   +AA A         +  + A  V  EA++ +GG+GY +E  + R  R++    
Sbjct: 309 AGRTTRTDAAAA-------ILFASENAVKVSLEAIQALGGAGYTKEWPVERFLRDAKLYD 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 362 IGAGTNEIRRYLIGREL 378


>gi|71906854|ref|YP_284441.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71846475|gb|AAZ45971.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 593

 Score =  269 bits (689), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 106/502 (21%), Positives = 194/502 (38%), Gaps = 69/502 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DK-VEFHPAWHALLRRSIHDGL 115
           E     V+    +E A+ +      L+      G +W DK V   P +    R+ + +G 
Sbjct: 31  EEASPDVVDAILEEAAKFSGEILSPLNRVGDRDGAKWKDKAVSTSPGFKEAYRQFVDNGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKD 173
           +    D  F      +   +  A   +         + P +T  ++ ALM   T      
Sbjct: 91  NGIGCDPEFGGQGLPK--LLSTAVSEMWKSANHAFSLCPMLTQGAIEALMIAGTDEQKAA 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S E+  T             + LTE   G+D+AA+ S+ + + DG Y + G K 
Sbjct: 149 YLPNLVSGEWTGT-------------MNLTEPSAGSDLAAVRSRAEPVGDGTYKVFGQKI 195

Query: 234 FLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL-----EDGSPNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L       G  N +    +++
Sbjct: 196 FITYGEHDMTDNIVHLVLARTPNAPEGVKGISLFVVPKFLLKADGTPGERNDVYCVSIEH 255

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G   + T  L F +     G L+G+ N     +  M      +  +  +     +   
Sbjct: 256 KLGIHGSPTAVLAFGDNGGAIGTLVGEENRGLEYMFIMMNAARFNVGLEGLGDAERAYQR 315

Query: 335 AIHYARRRHVS------GGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384
           A+ YA+ R         GG    +I  P ++R +  +   I A  AL++  A + D A  
Sbjct: 316 AVVYAKERVQGTEVGVRGGPKVPIIKHPDVRRMLMSMRSRIEAMRALAYVTAAAQDNAHG 375

Query: 385 -----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                 R++  A+A ++ P+ K W  + A  + +  ++  GG GYIEE   A+H R++  
Sbjct: 376 NPDEVERTKAQAFADLLIPVVKGWSTESAIDIASLGVQVHGGMGYIEETGAAQHLRDARI 435

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
            +I  G+      D++                + ++ G + K VI  +R + S    D  
Sbjct: 436 TAIYEGTTAIQANDLIG-------------RKIAREKGVTIKSVIAEMRAAASQLDGDLA 482

Query: 500 L--ARFLTEKIALASSAAALYR 519
              AR      AL ++   +  
Sbjct: 483 SIGARQNAAVDALETAVDWIVA 504


>gi|330970886|gb|EGH70952.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 601

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPNGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGVMRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEVVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|213967729|ref|ZP_03395876.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382366|ref|ZP_07230784.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302130681|ref|ZP_07256671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213927505|gb|EEB61053.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|331015047|gb|EGH95103.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 601

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 90/502 (17%), Positives = 180/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTKAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGVGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KSADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++G+  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEGVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGELTLKVGMAAMKD 512


>gi|219847345|ref|YP_002461778.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541604|gb|ACL23342.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 379

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 140/365 (38%), Gaps = 34/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--- 161
            L+++    GL        +        +   A  +  +++++A   +  SV ++ +   
Sbjct: 40  DLVKKMGELGLMGVAVSEEYGGAGMD--YVSYAIVIEELSRVDASLGVIASVNNSLVCYG 97

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    ++    + S               +     L+E   G+D AA  +   + 
Sbjct: 98  IEKFGTEEQKRELLTPLASG-------------RMLGAFSLSEPGAGSDAAAQRTTAVRD 144

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  +   +D  I++A  +   G   +   L D    G    +++NK+G 
Sbjct: 145 GDYYIINGVKNWVTNGDHADTIILMAMTDPSKGTKGITAFLVDTHAPGCHVVKVENKLGI 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----A 335
           RS  + ++ + +   + L          +  KI +  L++  + ++   V +A+     A
Sbjct: 205 RSAHSCQMAYDD---YRLPAWRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  + +   +   +AD+A  I AA  L++  A   D      ++A+ A  
Sbjct: 262 LAYSKVREQFGKPIHEFQAVGFTLADMATRIKAARLLTYEAAWRKDNGLDFIKDASMA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A  V  +A++  G +GY +E  + R +R++    I  G+     L + 
Sbjct: 320 -----KLFASETAMWVATKAVQLHGSNGYSKEYPVERFFRDAKITEIYEGTSEIQRLVIS 374

Query: 456 NLLEK 460
             + +
Sbjct: 375 REIVR 379


>gi|83718689|ref|YP_442192.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|167619151|ref|ZP_02387782.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           Bt4]
 gi|257138382|ref|ZP_05586644.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83652514|gb|ABC36577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           E264]
          Length = 596

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 97/478 (20%), Positives = 183/478 (38%), Gaps = 63/478 (13%)

Query: 63  EYVLSCTAQE-LARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDGL 115
           E     TAQ  L   A +    L      G+R         V   P +    R+ +  G 
Sbjct: 30  EDAGFDTAQAVLDESAKFCGEVLAPLNVEGDRNPSSWKDGAVTATPGFKEAFRQFVEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173
                   ++     +   I    + ++        + P +T  ++ AL+T  T      
Sbjct: 90  QGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDGAIEALLTAGTEAQKSR 147

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + G+D+A + S+ +   DG Y + G K 
Sbjct: 148 YVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQPDGSYKVFGTKI 194

Query: 234 FLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L +     G+ N +    +++
Sbjct: 195 FITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNDDGSLGARNDVHCVSIEH 254

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T  L++ +     G+L+G+ N     +  M         +  +     +  +
Sbjct: 255 KLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVAERAYQK 314

Query: 335 AIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           A  +A+ R  S            +I  P ++R +A +      A ALS+  A   D A  
Sbjct: 315 AAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARALSYVAAAHSDHAHR 374

Query: 386 RSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++E   A+  A      PI K W  +M   V +  ++  GG G+IEE   A++YR++  
Sbjct: 375 AADEGVRAKHQAIYEYLVPIVKGWSTEMVNEVASLGIQVHGGMGFIEETGAAQYYRDARI 434

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGSSGKKVITILRDSIS 492
            +I  G+       L     +  G  + + L   + Q    LG+        ++  + 
Sbjct: 435 LAIYEGTTAIQANDLVGRKTVRDGGAVAKALVGEIRQTAEALGAHDGPAFAAMKAQLE 492


>gi|197099190|ref|NP_001125529.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pongo
           abelii]
 gi|68565360|sp|Q5RBD5|IVD_PONAB RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|55728362|emb|CAH90925.1| hypothetical protein [Pongo abelii]
          Length = 423

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|323486311|ref|ZP_08091636.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum
           WAL-14163]
 gi|323693899|ref|ZP_08108087.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           symbiosum WAL-14673]
 gi|323400293|gb|EGA92666.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum
           WAL-14163]
 gi|323502050|gb|EGB17924.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           symbiosum WAL-14673]
          Length = 379

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 146/377 (38%), Gaps = 36/377 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++ E       L ++    GL    + + +    R   +   A  +  +++++A   +S
Sbjct: 29  IERDEKSEYPVELYKKMGEMGLIGLPYAKEYGGSGRD--YLDYAIAVEEISKVDASVGIS 86

Query: 154 PSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            SV+++     +A   +    +++ P++ S                    GLTE   G+D
Sbjct: 87  YSVSTSLYGGSIANGGSEEQKREFLPEVLSG-------------KTFGSFGLTEPNAGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
                +  +K  D  Y L+G K F  + P+SD F + A     +G   +          G
Sbjct: 134 AGGCVTIAEKKGD-KYILNGLKCFNTNGPLSDHFAVYALTHPELGSKGLSCFHVKKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM 328
               +++NK+G RS    EL F N        L       +  KI +  LD   + V+  
Sbjct: 193 FSIGKIENKMGIRSAQVSELVFENCEIPETALLGEEK---QGFKIAMKTLDGGRIGVAAQ 249

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + +AE     A  Y   R   G  L     +   +A++  +I  A  + ++ A    E 
Sbjct: 250 GLGIAEGAFEIARKYLMTREQFGKPLYRNQYLAFKMAELECEIEQAKYMLYKAALDKSEG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  AA A       K  C   A  V  EA++ +GG+G+++E  + R  R++    I 
Sbjct: 310 RPYSIPAAKA-------KLVCTDAAMHVTTEAVQMLGGNGFMKEYHVERMMRDAKITQIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L +
Sbjct: 363 EGTNEIQKLVISGALFR 379


>gi|153206796|ref|ZP_01945637.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218459|ref|YP_002305246.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154]
 gi|120577159|gb|EAX33783.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012721|gb|ACJ20101.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154]
          Length = 387

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               E+ R A           P     D     P    L  +    G+     +  +   
Sbjct: 10  DETIEMLREAVQQFAS-EEIAPRAAFIDANNQFP--RDLWPKLGDLGVLGITVNEEYGGS 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T    K + PK+ + E+   
Sbjct: 67  QMGYLAHVIAMEEISRASGSVGLSYGAHSNLCVNQINHFGTETQKKRYLPKLINGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + ++  D         W  + P +D  I+ 
Sbjct: 124 ----------VGALAMSETEAGSDVVGMRLRAEQKGDIFILNGTKMWITNGPEADVVIVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+LN
Sbjct: 174 AKTDPGAGSRGITAFLIEKDFPGYRTAQKLHKLGMRGSDTCELVFDHCEVPKENILGELN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        L      +  M+  L   + Y   R      + +  +++  IAD+ 
Sbjct: 234 KGISVLMSGLDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +A S D  K  S++AA A +       +  + A  V  +A++C+GG+G
Sbjct: 294 TALNASRAYLYAIAQSADAGKIHSKDAASALM-------FAAENATQVALQAIQCLGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R  R++    I  G+     + V   L +   
Sbjct: 347 YITEFPVERFLRDAKLYEIGAGTSEIRRIVVGRELFREGK 386


>gi|220922160|ref|YP_002497461.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219946766|gb|ACL57158.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 380

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 142/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+               +             
Sbjct: 23  ERIAPRALDWDADKHFPV--DVLREAGALGMGGIYIREEHGGSGLTRLDAALIFEALATG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    ++ M+    + +  + W P++              +        LTE
Sbjct: 81  CPTVSAFLSIHNMASWMIDRYGSGQQRERWLPELC-------------RAETLAAYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ +  ++  D  Y L+G K F+S   + D ++++A+  G  G   +  L+ 
Sbjct: 128 PGSGSDAAALRTTARREGDD-YVLNGTKQFISGAGAVDLYVVMART-GEAGPRGISTLVV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
             +  GL +   + K+G  +  T ++ F      +   LG+                L+ 
Sbjct: 186 PATTPGLSFGPNERKMGWNAQPTRQVIFGECRVPVANRLGEEGTGFRIAMAGLDGGRLNI 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              S+ G + +L +A+ Y R R   G  L +   ++  +AD+A ++ AA  + +  A+S 
Sbjct: 246 GACSLGGAQSALDKALAYTRERRAFGKRLDEFQALQFRLADMATELEAARLMIYAAASSL 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D         A A   A + K +   +   V  EA++  GG GY+ E  + +  R+   +
Sbjct: 306 DRGD------ADATQRAAMAKRFATDVGFKVANEALQLHGGYGYLSEYGVEKIVRDLRVH 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M L V   L
Sbjct: 360 QILEGTNEIMRLIVARGL 377


>gi|256379667|ref|YP_003103327.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255923970|gb|ACU39481.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 147/400 (36%), Gaps = 41/400 (10%)

Query: 68  CTAQELAR--MANYNTPQLHAYGPGGER--WDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
              + LAR   A    P         ER   D+            ++   GL C      
Sbjct: 14  DQLRSLARTFFAKEAVPHQE---RWAERKQVDR--------EFWTKAGELGLLCLSVPEE 62

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +       AH+         +   A      +   A  +    +     +W PK+ S E+
Sbjct: 63  YGGGGGTFAHEAVLLEEQARSGDSAWGGSVHNGIVAHYLLAYGSEEQKHEWLPKLASGEH 122

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDA 242
                           + ++E   G+D+  IT++ ++  DG Y LSG K F+S+   +D 
Sbjct: 123 -------------VGAIAMSEPGAGSDLQGITTRARRDGDG-YVLSGSKTFISNGAQADL 168

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            I+ A+ +   G   +  L+ + +   G    R+ +K+G +   T EL F +        
Sbjct: 169 VIVAAKTDPEKGAAGISLLVVEAARAEGFRRGRVLDKLGLKGQDTSELFFDDVRLPASAL 228

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G V+ M+ L    L  A+ SV+G+  +L   + Y ++R   G  LI     +  
Sbjct: 229 LGGEGQGFVQLMRQLPQERLVIAVSSVAGIEAALELTLDYVKQRSAFGRELIKFQNTRFT 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+ A +   A A            +     AA A+        W  +    V+ E ++ 
Sbjct: 289 LAECATEARVARAFVDECVGLHLRGELDVPTAAMAKW-------WSTERLCRVVDECVQL 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ E  IAR + ++    I  G+   M   +   L
Sbjct: 342 FGGYGYMTEYPIARAWADARVQKIYGGTNEIMKEIIARSL 381


>gi|241661754|ref|YP_002980114.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863781|gb|ACS61442.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 376

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 135/394 (34%), Gaps = 31/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     +  A  P    WD+    P    + R+    G +              
Sbjct: 7   QEMIRDAIRTFVR-EAITPHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEELGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+         + W               
Sbjct: 64  YLSLALILEEIAAGDGGTSTVVSVNNCPVCSMLMAFANDAQKQQWL-------------V 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D +A+ +   +  D        ++  S   +D  I++A  
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDHWVLNGVKQFITSGKHADVGIVMAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   L      G    RL++K+G  S+ T ++ F +        L       
Sbjct: 171 DKAAGKRGISAFLVPTKTPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLGEEGAGY 230

Query: 310 EDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +    L  L+   + ++   V +       A+ YA+ R   G  L     ++  +A++A 
Sbjct: 231 K--MALSGLEGGRIGIAAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A  + +  A+  D      +EAA A       K    +MA  V ++A++  GG GY
Sbjct: 289 RVDVARQMVWHAASLKDAGLPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|325915813|ref|ZP_08178112.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537934|gb|EGD09631.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 393

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 132/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P   A + ++   G      D     +  ++                 
Sbjct: 35  PYAAQWDAESHFP--RAAIAKAAELGFCGLYTDEGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++A      V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMATWLIASYGNEGVRAQWGEAMTSG-------------AKLGSYCLTEPGAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ Q+  D  Y L+G K F+S   +   +++    G  G   +          
Sbjct: 140 SDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAFAVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F++        L     G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  EA++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|153836704|ref|ZP_01989371.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149750053|gb|EDM60798.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 389

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 139/374 (37%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F    +   AH I    +   +   
Sbjct: 33  PLAQSIDQSNDFP--NHLWSKLGEMGLLGVTTSEEFGGANMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGTQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG+ N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGEENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYTQMNAAKAYVYAIAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDSAGA-------ILYSAELATKMALDAIQLLGGNGYINEFDTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|306845026|ref|ZP_07477607.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306274658|gb|EFM56447.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
          Length = 592

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 91/547 (16%), Positives = 194/547 (35%), Gaps = 58/547 (10%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +    +  A      A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDDADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQNGDHIKGFLAELQDDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
            +    AR  T+ +  A++      A         L +      +     L G   A  +
Sbjct: 497 SKAISEAREATDWLQKATAEGRAEEALSGATPYQRLLSLTAGGAYLARAALAGDDAARAV 556

Query: 555 IDSLYLD 561
           +   + +
Sbjct: 557 LCRFFAE 563


>gi|146307061|ref|YP_001187526.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina ymp]
 gi|145575262|gb|ABP84794.1| isovaleryl-CoA dehydrogenase [Pseudomonas mendocina ymp]
          Length = 387

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A ++  Q     P   + D+    P    + R+    GL     +  +   
Sbjct: 11  GETIDMLRDAVHHFAQAE-LAPRAAQIDRDNEFPM--DMWRKFGDMGLLGMTVEEEYGGT 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 68  NMGYLAHVVAMEEISRASASVGLSYGAHSNLCVNQIRKNGTHEQKLKYLPKLCSGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +K  D         W  + P ++ +++ 
Sbjct: 125 ----------VGALAMSEPNAGSDVVSMKLRAEKRGDRYVLNGNKMWITNGPDANTYVIY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + +    G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDINAGSRGMTAFIVERDFKGFSRHQKLDKLGMRGSNTCELVFEDCEVPEENILGSEG 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V  +   +  +  ++S      M   +   + Y   R      + +  +++  +AD+ 
Sbjct: 235 GGVRVLMSGLDYERTVLSGGPTGIMSACMDVVLPYVHERQQFKQSIGEFQLVQGKLADMY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ +  + +A + D  +   ++AA           +  +MA  +  + ++ +GG+G
Sbjct: 295 AGMNASKSYLYNVAKACDRGEESRKDAA-------AVILYTAEMATKMALDTIQLLGGNG 347

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           Y  E    R  R++    I  G+     + +   L   T 
Sbjct: 348 YTNEYPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETK 387


>gi|229196565|ref|ZP_04323309.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
 gi|228586921|gb|EEK44995.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293]
          Length = 569

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 152/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++ +      + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEIEIDVENVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|254524761|ref|ZP_05136816.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219722352|gb|EED40877.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 387

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 134/358 (37%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           AL  +    GL     + ++        AH +    +   +        + S    + + 
Sbjct: 45  ALWPKLGEQGLLGLTVEEAYGGTGMGYLAHVVAMEEISRASGGIGLSYGAHSNLCVNQLR 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + P + S              +    L ++E   G+D+ ++  +  K  D
Sbjct: 105 KNGNEEQKQRFLPDLCSG-------------AKVGALAMSEPGAGSDVVSMKLRADKRGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   L +    G    +  +K+G RS
Sbjct: 152 RYVLNGNKMWITNGPDADVLVVYAKTDMEAGAKGITAFLVEKGMKGFSTAQKLDKLGMRS 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L    G V  +   +  +  ++S   +  M  ++   + Y  
Sbjct: 212 SPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDYERVVLSGGPLGLMAAAMDVVMPYVH 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            RH  G  +    +++  IAD+ + + A  A  + +A + D+ ++  ++AA A       
Sbjct: 272 ERHQFGEAIGSFQLIQAKIADMYVGLGACRAYVYAVARACDQGRTTRQDAAGA------- 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + A  +  +A++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 325 ILYAAEKATWLTGQAIQILGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|30584677|gb|AAP36591.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase [synthetic
           construct]
 gi|60654071|gb|AAX29728.1| isovaleryl coenzyme A dehydrogenase [synthetic construct]
          Length = 424

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|66811156|ref|XP_639286.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium
           discoideum AX4]
 gi|74854817|sp|Q54RR5|ACDSB_DICDI RecName: Full=Probable short/branched chain specific acyl-CoA
           dehydrogenase; Short=SBCAD
 gi|60467914|gb|EAL65927.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium
           discoideum AX4]
          Length = 413

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 17/282 (6%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFI 244
                M  T+      L+E   G+D  A+ ++  + SDG + L+G K ++++   +  FI
Sbjct: 138 EKYLSMLATNTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFI 197

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++A V+   G   +   + + +  GL   + ++K+G R+++T E+   N    ++   ++
Sbjct: 198 VMANVDPSQGYKGITAFIVESNNPGLRIGKKEDKLGIRASSTCEVILDNC---VVKPTDI 254

Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRA 358
                   KI I  L+   + ++   + LA+ +      Y   R   G  +     M+  
Sbjct: 255 LGELGRGYKIAIEGLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQGMQFT 314

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            AD+A+DI A   L++  A   +               A + K  C ++A    +  +  
Sbjct: 315 YADLAVDIEAGRLLTYNAARIKEAGLPF-------VFQASMAKLHCSRVAEKAASACISM 367

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G+ +E    + +R+S    I  G+ N  +  +   + K
Sbjct: 368 LGGVGFTKEFPAEKFFRDSKVGQIYEGTSNIQLQTIAKEIVK 409


>gi|119471972|ref|ZP_01614257.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium
           TW-7]
 gi|119445230|gb|EAW26521.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium
           TW-7]
          Length = 385

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 141/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q  A+ A           P   +WD+    P     ++ +   G        
Sbjct: 2   DFNLSEDQQAFAQTARQFAE--SELAPHAAKWDREHIFP--KDTIKAAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           +       +++    +  MVA   T  +   +  ++   E
Sbjct: 58  EAGGLGLSRLDSSIIFEQLALGCTATTAMLTIHNMATWMVASFGTDAIKDKYVDQLVMGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                        +     LTE   G+D A++ ++  +  D  Y ++G K F+S    ++
Sbjct: 118 -------------LLASYCLTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+  G  G   +   +      G+ Y + + K+G  +  T  + F +       L
Sbjct: 164 VLVVMARTGGE-GAAGISAFVVPADAQGVEYGKAEEKMGWNAQPTRLISFEDVRIPAHNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++ A  S+   + +L  A  Y + R   G  L     ++  
Sbjct: 223 LGAEGEGFKFAMQGLDGGRINIATCSIGTAQAALNTAREYLKERSQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+  ++ AA  +    A   D   S             + K +   +   V  EA++ 
Sbjct: 283 IADMNTELVAARQMVRLAAFKLDTGDSEK------TTYCAMAKRFATDVGFTVCNEALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH R+   + IL G+   M + +   +
Sbjct: 337 HGGYGYIKEYPLERHVRDVRVHQILEGTNEIMRVIIARRI 376


>gi|307544734|ref|YP_003897213.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307216758|emb|CBV42028.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 603

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 94/538 (17%), Positives = 173/538 (32%), Gaps = 67/538 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSIHDGLHC 117
            V+    +E AR A     +L      G+         +V+    +     R +  G   
Sbjct: 37  DVVGAILEEGARFARE---ELLPLNQSGDLEGCLLEGGEVKTPKGFKEAYSRYVEGGWPG 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              D          +  +  + +     L  G     S  +A  +    T      +  K
Sbjct: 94  LAADPEQGGQGLPPSLAMVLSEMICATNLAWGMYPGLSHGAADALRHHGTEAQQATYLSK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   GTD+  I ++     D  Y LSG K F+S+
Sbjct: 154 LVEGVWTGT-------------MCLTEPHCGTDLGLIKTRAVPNDDDSYTLSGTKIFISA 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  F+VP+ L D     G  NG+    L++K+G 
Sbjct: 201 GDHDLAENIVHLVLAKLPDAPAGSKGISLFVVPKFLPDADGNPGERNGVSCGSLEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + F    GFL+G  +     +  M     +   I  +     S   A+ YAR 
Sbjct: 261 HGNATCVMNFDGARGFLVGKPHKGLACMFTMMNAARIGVGIQGLGLTEASFQNALAYARD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEA 383
           R                  +I  P ++R +            L    A         D+ 
Sbjct: 321 RLQMRALSGAKAEDKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYAAQMVDVVERSDDT 380

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +          ++ PI K +  ++      E ++  GG G+I+E  + +  R++    + 
Sbjct: 381 EQTERAETLLGLLTPIVKAFLTEVGFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLY 440

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKGL 500
            G+     LD+L   +L       +     + +   +  G   +      ++    + G 
Sbjct: 441 EGTTGIQALDLLGRKVLMSQGETLKIFTKEIHKFCQAEEGNPDMAEFVRPLAKLNAEWGE 500

Query: 501 ARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
                   A+       +A+  Y      +   +L  R +    S    L    + A 
Sbjct: 501 LTMGVGMKAMNDREEVGAASVDYLMYSGYVTLAYLFARAVKQAKS---ALAAGTDDAA 555


>gi|302062363|ref|ZP_07253904.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tomato K40]
          Length = 601

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 90/502 (17%), Positives = 180/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPSGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTKAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGVGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KSADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++G+  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEGVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGELTLKVGMAAMKD 512


>gi|163738787|ref|ZP_02146201.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|163741502|ref|ZP_02148893.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161385236|gb|EDQ09614.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161388115|gb|EDQ12470.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 386

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 143/399 (35%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P  +  D+    PA   L +     GL        F
Sbjct: 7   TFDLGEDVNALRDMVHRWAQERVRPMAQEIDQKNEFPA--ELWQEMGELGLLGITVPEEF 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L         + P++ S E+
Sbjct: 65  GGAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNAEQKAKYLPRLVSGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDHYRLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPDAGSKGMTAFLIEKEFKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENVLG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A +    M   + E + Y + R   G  + +  +M+  IA
Sbjct: 232 EEGKGVRVLMSGLDYERVVLAGIGTGIMAACMDEMMPYMKERKQFGQPIGNFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   +  A A  + +A + D+     ++AA           +  ++A     +A++  G
Sbjct: 292 DMYTAMNTARAYVYEVAKACDKGTVTRQDAA-------ACCLYASEVAMTQAHQAVQAFG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+GY+ +  + R +R++    I  G+     + +   L 
Sbjct: 345 GAGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|319783100|ref|YP_004142576.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317168988|gb|ADV12526.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 388

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 145/397 (36%), Gaps = 36/397 (9%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+A+   A+   P           WD+ +  PA   ++R +   GL          
Sbjct: 19  RAIQEMAQAFAADRVAP-------NALDWDRNKHFPA--DVIRETGPLGLGGIYIRDDVG 69

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +   +        A       +S     ASM+         + + PK+ S E+  
Sbjct: 70  GSALGRLDAVLIFEALSHADPAFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEW-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
                           LTE   G+D AA+ ++  K   G Y L+G K F+S    SD + 
Sbjct: 128 -----------LASYCLTEPGSGSDAAALKTRAVKSG-GDYVLNGTKQFISGAGDSDVYA 175

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---D 301
           ++ +  G  G   +  ++      GL +   ++K+G    +T ++ F +          D
Sbjct: 176 VMVRT-GADGPKGISTIVVPRDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSD 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G          L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD
Sbjct: 235 EGAGFGIAMAGLDGGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ AA    +  A+  D           A   + + K +       V  +A++ +GG
Sbjct: 295 METELQAARIFLYAAASKLDRKAPD------AGKWSAMAKRFVTDTGFNVANDALQLLGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  I +  R+   + IL G+   M + +   L
Sbjct: 349 YGYLHDYGIEKLVRDLRVHQILEGTNEIMRVIIARAL 385


>gi|260553738|ref|ZP_05826009.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405138|gb|EEW98637.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 383

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 138/367 (37%), Gaps = 28/367 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++ +    GL        +E +    +     A  L   +      + + +   +S +
Sbjct: 38  QEIVEQMKALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGL 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T      + P++   E             V     LTE   G+D A++ +   K  
Sbjct: 98  IIDGTEAQKSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKTTAVKDG 144

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
              Y L+G K F+++ P +  F ++A+    + G   +   + D    G+   +   K+G
Sbjct: 145 -EFYILNGTKRFITNAPHAGVFTVMARTNSDIKGAGGISAFIVDSQTPGISLGKRDKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
            +   T ++ F N        +      G    MK+L    L  A +SV      L +++
Sbjct: 204 QKGAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSL 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +YA  R   G  + +  +++  +AD   +I AA  +    A   D  ++ S E       
Sbjct: 264 NYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE------- 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +  +M   V    ++  GG+GYI E +I R YR+     +  G+     + +  
Sbjct: 317 ASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIAR 376

Query: 457 LLEKGTN 463
            + +  +
Sbjct: 377 NMIRAAS 383


>gi|182677610|ref|YP_001831756.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633493|gb|ACB94267.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 380

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 140/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P     LR++   G+     D        K+            A
Sbjct: 23  EHIAPYALEWDAKKHFPL--EALRQAASLGMAGIYVDEEIGGSGLKRIDATLIFEALAKA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       M+    TP    +WAP++   ++                  LTE
Sbjct: 81  CPSTAAFLSIHNMVTWMIGRYGTPAQRNEWAPRLCRMDW-------------VGSYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D    ++G K F+S   + D ++++ +  G  G   +  L+ 
Sbjct: 128 PSAGSDAAALRTRAIREGDHF-IVNGAKQFISGGGASDVYVVMVRT-GTEGPKGISALVI 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
                G+ +   + K+G  +  T  + F N       LLG+                L+ 
Sbjct: 186 FKDMEGVSFGANERKMGWNTQPTCTVNFDNVMVPVSHLLGEEGDGFKIAMAGLDGGRLNI 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G + +L +++ Y R R   G  L     ++  IAD+A ++AAA       A + 
Sbjct: 246 AACSIGGAQSALDKSVQYMRERSAFGATLDRFQALQFRIADMATELAAARIFLHHAARAL 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A +   + K +   +  AV  EA++  GG GY+ E  I +  R+   +
Sbjct: 306 DAKLPD------ATVTCAMAKRFATDIGFAVANEALQLHGGYGYLSEYGIEKIVRDLRVH 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + +   +
Sbjct: 360 QILEGTNEIMRVIIARAV 377


>gi|146309095|ref|YP_001189560.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577296|gb|ABP86828.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 601

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 81/441 (18%), Positives = 160/441 (36%), Gaps = 53/441 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLSPLNRVGDTEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAISEMVGSANWSWGMYPGLSHGAMNTLSAHGTDEQKHTYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V     I YAR R  
Sbjct: 264 ATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVGFQGGIKYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D        + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQNEEEK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  ++     +  M+  GG G+I E  + ++ R+   + +  G+
Sbjct: 384 KAADELLAFLTPIAKAFMTEVGFEAASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGT 443

Query: 447 GNAMVLDVLN---LLEKGTNL 464
                LD+L    L+ +G  L
Sbjct: 444 TGVQALDLLGRKVLMTQGGAL 464


>gi|171463650|ref|YP_001797763.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193188|gb|ACB44149.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 595

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 96/524 (18%), Positives = 180/524 (34%), Gaps = 59/524 (11%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P    +  +    LL A         ++E++      ++   +E  + A+     L+   
Sbjct: 6   PPLRDI-QFVIHELLDAGKEFSALPAYQEVDK---DTINQIIEEAGKFASEIAFPLNQIG 61

Query: 88  GPGGE-RWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G  R D   V     +     + +  G      D ++      Q            A
Sbjct: 62  DKEGCTRSDDGSVTTPAGFKQAYEQYVAGGWPALSCDPAYGGQGLPQLLNTVLYETLNSA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                     S  +   +    T    K +  K+ S ++  T             + LTE
Sbjct: 122 NQSWTMYPGLSHGAYECLHAHGTNEQKKTYLEKLVSGQWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  + ++ +  +D  Y ++G K F+SS   D       ++LA++         +
Sbjct: 169 PHCGTDLGLLKTKAELQADDTYAITGTKIFISSGDHDLAENIVHLVLARLPDSPIGSKGI 228

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             F VP+         G  N +    L++K+G   NAT  + F    G L+G+ +     
Sbjct: 229 SLFAVPKFQVGADGSVGKSNAVSCGSLEHKMGIHGNATCVMNFDGAIGTLVGEPHKGLNA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   + S+    V+   +  YA+ R                  +I  P ++
Sbjct: 289 IFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLTGAKAPEKAADPIIVHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPA 410
           R +        A  A S+ +A   D   +  +E           ++ PI K +    A  
Sbjct: 349 RMLLTQRAYAEAGRAFSYWVALMIDTELNHPDEGVRKETGEMVTLLTPIIKAFLTDNAFV 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQL 468
              E M+  GG GYI E  + ++ R++  N I  G+     LD+L     G       + 
Sbjct: 409 ATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLGRKVLGDMGKKLTKF 468

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
              +E+ +   G  V   +++ I    +       LT++I + +
Sbjct: 469 GKIIEKFIDDEG--VRKEMQEFIDPLADIAVKVEKLTKEIGMKA 510


>gi|163853502|ref|YP_001641545.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665107|gb|ABY32474.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 587

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 105/535 (19%), Positives = 208/535 (38%), Gaps = 71/535 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAW 103
           +A   +V+ +    +G        +E  R+A      L+      G  +   +V   P W
Sbjct: 17  VAGLEAVLAQSGAEIGPDDAVAILEEAGRLAGNVIAPLNRIGDRHGTPFSDGRVTTAPGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +  R  +  G +  +    +        H I AA   +         + P +T+  + A
Sbjct: 77  ASAYRAFVEGGWNGVLAAPDYGGQGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGVEA 134

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    +  +   +  K+ S E+                + LTE + G+D++A+ ++ +  
Sbjct: 135 LAAHGSDELKGRYLEKLVSGEW-------------TATMNLTEPQAGSDLSALRTRAEAQ 181

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K +++    D       ++LA+++        +  FLVP++L DGS N L
Sbjct: 182 GDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPAGTRGISLFLVPKVLPDGSRNDL 241

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G  ++ T  + F +     G+L+G+ N     +  M     L+  +  V  
Sbjct: 242 RCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRGLACMFTMMNSARLNVGLQGVGV 301

Query: 328 MRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              ++    ++R +  +    AA+  + +  A  
Sbjct: 302 AEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQRTLLTMKAYTAASRGICYLTAQG 361

Query: 380 FDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++
Sbjct: 362 LDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMRDA 421

Query: 438 PANSILLGSGNAMVLDVL------------------------NLLEKGTNLFEQLFSTLE 473
               I  G+     +D++                         LL+ GT  F    + L 
Sbjct: 422 RILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIASMRRVAEGLLKDGTPGFGHAAARLR 481

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSAAALYRAGMNDIA 526
           + +G S  +  + L  +++  +  + L  A        L   AA L  AG+   A
Sbjct: 482 EGIG-SLDRATSFLLKALASNRPQEALPGATPYLRLFGLVQGAACLATAGLASSA 535


>gi|118618093|ref|YP_906425.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium ulcerans Agy99]
 gi|118570203|gb|ABL04954.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium ulcerans Agy99]
          Length = 389

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 119/375 (31%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENSRFP--QEALDALNASGFNALHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P +                +      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDELKKQVLPSL-------------ADGAAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAGAMRTRAKADGDDWILNGTKCWITNGGKSSWYTVMAVTDPENGANGISAFVVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G      + K+G + + T EL F N       ++G+                      +V
Sbjct: 201 GFVVGPKERKLGIKGSPTTELYFENCRVPGDRMIGEPGTGFKTALATLDHTRPTIGAQAV 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   +  +S
Sbjct: 261 GIAQGALDAAIAYTKDRKQFGKSISDFQAVQFMLADMAMKVESARLMVYSAAARAERGES 320

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I  G
Sbjct: 321 N------LGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQIYEG 374

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L +
Sbjct: 375 TNQIQRVVMSRALLR 389


>gi|16877964|gb|AAH17202.1| Isovaleryl Coenzyme A dehydrogenase [Homo sapiens]
 gi|30583129|gb|AAP35809.1| isovaleryl Coenzyme A dehydrogenase [Homo sapiens]
 gi|61362788|gb|AAX42280.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|61362792|gb|AAX42281.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|123984092|gb|ABM83503.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
 gi|123998235|gb|ABM86719.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct]
          Length = 423

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|313498919|gb|ADR60285.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 592

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/520 (18%), Positives = 182/520 (35%), Gaps = 61/520 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVH--KELELLGEYVLSCTAQELA--RMANYNTPQLH 85
               M+       L   + + P+      +L  + +   +    E A   +A    P   
Sbjct: 7   PLRDMDF------LFNEVFDIPTWWAQTPDLAEVVDGDTARAILEQAGKLIAERVAPLNR 60

Query: 86  AYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           +    G RW+  +V     +    R    DG      D ++  +   +    +   +   
Sbjct: 61  SGDEQGCRWEAGQVRTPDGFADAYRAFAADGWVGVAGDPAYGGMGMPKVIGAQLEEMLNA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G     +  +   +    +  +   + P ++   +             A  + LT
Sbjct: 121 ANLSFGLYPMLTAGACLALLNHASEALQALYLPPMYQGRW-------------AGSMCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  I ++ Q ++DG Y +SG K F++    D       ++LA++         
Sbjct: 168 EPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHLVLARLPDAPAGPKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  FLVP++L D     G  N +    +++K+G +++AT  + F    G+L+G+ N    
Sbjct: 228 ISLFLVPKVLVDADGVLGEANAVSCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLN 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVM 355
            +  M     L   I  ++    S   AI YAR R                  +I  P +
Sbjct: 288 AMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEAPSQYADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAP 409
           +R +  +        A S  +A   D AK   + A  A   A      P+ K +   M  
Sbjct: 348 RRMLLTMKALNEGGRAFSTYVALQLDMAKYSDDPATRANAEAKVALLTPVAKAFLTDMGL 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
                  + +GG GYI E    +  R+     I  G+     LD++   LL  G   +  
Sbjct: 408 ETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLVGRKLLGDGGKAYRG 467

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           L   +     +            ++       L+ +L ++
Sbjct: 468 LSDEIVSFAQALPVAHAEFSAPLLAAVHNLDELSAWLLDR 507


>gi|73542233|ref|YP_296753.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119646|gb|AAZ61909.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 594

 Score =  269 bits (688), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 93/483 (19%), Positives = 186/483 (38%), Gaps = 56/483 (11%)

Query: 68  CTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E A+        L+      P   +   V   P +    R+    G    +  + F
Sbjct: 39  AVLEEAAKFNEQVVAPLNRAGDLDPSSWKDGMVTTTPGFKDAFRQFGEGGWQGVLHPQEF 98

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSRE 182
           E     +   I  A   ++        + P +T  ++ AL+T  +      + PK+   E
Sbjct: 99  EGQGLPK--LIATACNEMLNSANLSFALCPLLTDGAIEALLTAGSDEQKATFLPKLICGE 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
           +  T             + LTE + G+D+AA+ ++ +   DG Y + G K F++    D 
Sbjct: 157 WTGT-------------MNLTEPQAGSDLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDM 203

Query: 242 ----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA+          +  F+VP+ L +     G+ N      +++K+G +++ T
Sbjct: 204 ADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNADGSLGARNDAHCVSIEHKLGIKASPT 263

Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L+F +     G L+G+ N     +  M         +  ++    +  +A+ YAR R 
Sbjct: 264 AVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFAVGMQGIAVSERAYQQAVAYARERV 323

Query: 344 VSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA---- 390
            S            +I  P +KR +  +   I  A ++++  A + D A + ++EA    
Sbjct: 324 QSRPVDGSAREAVTIIHHPDVKRMLMTMRGLIEGARSVAYVAAATCDAAHNHADEAVRTK 383

Query: 391 --AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A    + PI K W  +++  V +  ++  GG G+IEE   A+HYR++    I  G+  
Sbjct: 384 NQALYEFLVPIVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTA 443

Query: 449 AMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                L     +  G  +     +++ +   + GK          +   + +     + E
Sbjct: 444 IQANDLVGRKTVRDGGAVARAFCASIAETEAALGKHGGAAFTAVQAQLAKGRAALEAVVE 503

Query: 507 KIA 509
            + 
Sbjct: 504 FVV 506


>gi|330465858|ref|YP_004403601.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328808829|gb|AEB43001.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 387

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 125/375 (33%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P   A          H       +                   A   +
Sbjct: 33  PHAAEADETGEFP--KASYDALRAADFHAPHIPVEYGGAGADALATAIVIEEVARACASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + + + P + S E                   L+E   G
Sbjct: 91  SLIPAVNKLGTMPLLLAGSEELKRRYLPPVASGE-------------AMFSYCLSEPEAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++T++  +  D        +W  ++ +S+ + + A  +       +   + + S  
Sbjct: 138 SDAASMTTRAVRDGDHWVLNGVKRWITNAGVSEFYTVFAVTDPAARSRGISAFVVEKSDP 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    TG    M+ L    +  A  +V
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDNVRIPADRMIGAEGTGFATAMQTLDHTRVTIAAQAV 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  + +   ++  +AD+ + + AA  L++  A   +    
Sbjct: 258 GIAQGALDYAKGYVAERKQFGKAVAEFQGVQFMLADMGMKLEAARQLTYAAAGRSERGD- 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 317 -----ADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L K
Sbjct: 372 TNQVQRIVMARQLLK 386


>gi|253582720|ref|ZP_04859940.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           varium ATCC 27725]
 gi|251835296|gb|EES63837.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium
           varium ATCC 27725]
          Length = 375

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 139/375 (37%), Gaps = 33/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     +++   +GL    +D+ +          I A           
Sbjct: 26  PAAAEVDRKAEAPI--ENIKKMGEEGLMGIPFDKKYGGAGFDTKTYILAVEELSKGCAST 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS  ++  A  +    T    + +               P+ K       G TE + 
Sbjct: 84  GVIMSAHISLCAWPIYQYGTEVQKERFLI-------------PLAKGEKIGAFGWTEAQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GT +           +  Y ++G K  +++   ++ F++ A+ +       +   + +  
Sbjct: 131 GTRV-----TAVLNGEN-YVINGKKVLITNALEAEIFVVFAKTDMEKAENNISAFIIEKG 184

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM--KILIYLDSAIM 323
             G      ++K+G R ++T EL F +        L  V  G    M       +  A  
Sbjct: 185 TEGFSIGEPEDKMGVRGSSTCELIFEDCIVPKNNMLGKVGEGFKIAMSTLNGGRIGVAAQ 244

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L EAI Y + R V+G  +      +  IAD+   I AA  L ++ A+  D  
Sbjct: 245 AIGLAQGALDEAIKYIKEREVNGKKVSQFQNTQFLIADLQTRIDAARLLVYKAADMKDRG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +           +A ++K+   ++A     +A++  GG+GY+++  + R  R++    I 
Sbjct: 305 EEYG-------YLASMSKFLASEIAMKTTEKAVQLFGGNGYLKKYPVERMMRDAKVTEIY 357

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 358 EGTSEVQKIVIATWL 372


>gi|73539841|ref|YP_294361.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72117254|gb|AAZ59517.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 393

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 140/392 (35%), Gaps = 24/392 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           E+ R A  +  Q       GE  D+ +  P  AW  +    +   L  ++ +      + 
Sbjct: 16  EMLRGAVRDWAQAELAPRAGE-IDRTDQFPMDAWKKMGDLGV---LGITVAEEYGGANMG 71

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH +    +   +        + S    + +    T      + PK+ S E+      
Sbjct: 72  YLAHMVAMEEISRASASVGLSYGAHSNLCVNQIHRNGTASQKAKYLPKLVSGEW------ 125

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +     D         W  + P  D  ++ A+ 
Sbjct: 126 -------IGALAMSEPNAGSDVVSMKLRADFKGDRFVLNGTKMWITNGPDCDVLVVYAKT 178

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E  +G   +   + +    G    +  +K+G R + T EL F +    +   L       
Sbjct: 179 EPDLGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPVENILGGENSGA 238

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + +   +  + A++S   +  M+  +     Y   R   G  + +  +++  +AD+   +
Sbjct: 239 KVLMSGLDYERAVLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADMYTTL 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA +  + +  + D     SE     R        +  + A  +  E ++ +GG+GYI 
Sbjct: 299 QAARSYLYTVGKNLDS--LGSEHVRQVRKDCAAVILYTAEKATWMAGETVQILGGNGYIN 356

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E    R +R++    I  G+     + +   L
Sbjct: 357 EYPAGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|13476195|ref|NP_107765.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14026955|dbj|BAB53551.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 589

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 103/530 (19%), Positives = 188/530 (35%), Gaps = 79/530 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+      G   R   V   P W  L RR I  G + 
Sbjct: 31  LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLRDAAVTMPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +          + A  ++  A +  G   + ++ +   +    +  +   +  K
Sbjct: 91  LSGPEDYGGQALPTMLGVAALEMWNSAAMAFGIGPTLTMGAVEALDKHASEALKAKYLAK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F++ 
Sbjct: 151 LVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFITY 197

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+   +     G+ N +    L++K+G 
Sbjct: 198 GEHDFTDNIIHLVLARLPDAPAGTRGISLFLVPKFFVNDDGSLGARNDVFCSGLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            ++ T  + + +          G+L+G+ N     +  M     L   +  V+    +  
Sbjct: 258 HASPTCTMIYGDGFRGATPGAIGWLIGEENKGLACMFTMMNNARLAVGMQGVAVAEAATQ 317

Query: 334 EAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +AI YA  R               ++  P ++R +  +      A A+S+  A++ D A+
Sbjct: 318 KAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAIDMAR 377

Query: 385 SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               + A      A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR++  
Sbjct: 378 VSDGDQAAHWRDRANLLTPLAKAFSTDVGVEVASLGVQVHGGMGFIEETGAAAFYRDARI 437

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE-----------QDLGSSGKKVITI 486
             I  G+       L    L   G          L            Q  G +   +   
Sbjct: 438 APIYEGTNGIQAIDLVTRKLPLGGGEHVHGFIGELAGAANAVRTSNLQGFGRTADALDAA 497

Query: 487 LRDSISLC------------KEDKGLARFLTEKIALASSAAALYRAGMND 524
           L D                 +E    A      I+LA+  A L R  + D
Sbjct: 498 LGDLTQATRFLQKLSADGRMEEALAGATPYLRLISLAAGGAYLARGALAD 547


>gi|319441042|ref|ZP_07990198.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 415

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 133/395 (33%), Gaps = 25/395 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +EL R A     +     P     D  E  P     L+     G +       F   
Sbjct: 40  EEYREL-RSAIRQIAE-EQIAPHAAEVDADERFPE--EALKALNESGFNAVHVPDEFGGQ 95

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +            +  + + +      + L  +  +     P I         
Sbjct: 96  GADSLAAVIVIEEVARVCGSSSLIPAVNKLGTMGLILAGSDELKAKVLPDIAEGG----- 150

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-ML 246
                         LTE+  G+D   + ++  +  D  + L+G K F+++     ++ ++
Sbjct: 151 ---------LASYALTEREAGSDAGGMKTKAVRDGDE-WVLNGSKCFITNGSRATWVTVM 200

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A  +   G   +   +      G     L++K+G + + T EL F +       ++G+  
Sbjct: 201 AVTDPEAGSRGISAFMVHKDDPGFRVGGLEHKLGIKGSPTAELYFEDCRIPADRMIGEEG 260

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                               ++   + +   A+ Y + R   G  +      +  +AD+ 
Sbjct: 261 TGFKTALQTLDHTRPTIGAQALGIAQGAFDAAVEYVKERKQFGKPIAAFQNTQFTLADMK 320

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  + +  A++ +     +E+     +MA  +K +   +A  V  +A++ +GG G
Sbjct: 321 MKIDAARLMIYTAASNAERG--VAEDGGKLGLMAAGSKAFASDIAMEVTLDAIQLLGGYG 378

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y  +  + R  R++    I  G+     + +   +
Sbjct: 379 YTRDFPVERMMRDAKITQIYEGTNQICRMVMGRQI 413


>gi|319784729|ref|YP_004144205.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317170617|gb|ADV14155.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 589

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 102/530 (19%), Positives = 192/530 (36%), Gaps = 79/530 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHC 117
           LG+ ++     E  R A      L+      G       V   P W  L RR I  G + 
Sbjct: 31  LGDDLVDAVLGEAGRFATEEVAPLYTIGDRQGAALKDAAVTTPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +          + A  ++  A +  G   + ++ +   +    +  +   +  K
Sbjct: 91  LSGPEEYGGQALPTMLGVAALEMWNSAAMAFGIGPTLTMGAVEALDKHASTDLKAKYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+AA+ ++ + + DG Y + G K F++ 
Sbjct: 151 LVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPVGDGSYRIFGQKIFITY 197

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+ L       G+ N +    L++K+G 
Sbjct: 198 GEHDFTDNIIHLVLARLPDAPAGTRGISLFLVPKFLVGDDGALGARNDVFCSGLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            ++ T  + + +          G+L+G+ N     +  M     L   +  V+    +  
Sbjct: 258 HASPTCTMIYGDGFQGTKPGAVGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEAATQ 317

Query: 334 EAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +AI YA  R               ++  P ++R +  +      A A+S+  A++ D A+
Sbjct: 318 KAIAYANERRQGKAASYTGTGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAIDMAR 377

Query: 385 SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + + A      A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR++  
Sbjct: 378 VSAGDEAAHWRDRANLLTPLAKAFSTDIGVEVASLGLQVHGGMGFIEETGAAAFYRDARI 437

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE-----------QDLGSSGKKVITI 486
             I  G+       L +  L   G +      + L            Q  G +   +   
Sbjct: 438 APIYEGTNGIQAIDLVMRKLPLGGGDHVHGYIAELADMAAAVRTSNLQGFGRTADALDAA 497

Query: 487 LRD------------SISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
           L D            +     E    A      I+LA+  A L R  + D
Sbjct: 498 LGDLGEATRFLQKLAAEGWADEALAGATPYLRLISLAAGGAYLARGALAD 547


>gi|301311218|ref|ZP_07217146.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3]
 gi|300830792|gb|EFK61434.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3]
          Length = 569

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 95/458 (20%), Positives = 173/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKQEGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +ID P +   +A +   + A  AL ++ A   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGRALLYQTARYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E K + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERKEQKQYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L     FE +  + E + L +   ++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFEAIPCSAEMEPLKARLVEMANKFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAG 521
           S++  KE +        AR L E  A    A  L +  
Sbjct: 489 SMAKVKESQDQELLDFVARRLMEMAADIIMAHLLIQDA 526


>gi|217977902|ref|YP_002362049.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2]
 gi|217503278|gb|ACK50687.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2]
          Length = 594

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 98/546 (17%), Positives = 184/546 (33%), Gaps = 71/546 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK----- 96
           +L  L+           E     ++    +E A++       L      G+         
Sbjct: 14  VLFELMGADELAALPGYEDFTRDLIDPILEEAAKICEE---VLFPLNRSGDEEGCTLENG 70

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V     +    +     G      D  F        H +      +M        + P 
Sbjct: 71  VVRTPKGFREAYQTYCEGGWPSLACDPEFGGQGAP--HMLGVMIEEMMCSANLSFGLYPG 128

Query: 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  + V L    +  + + + PK+    +  T             + LTE   GTD+  
Sbjct: 129 LTQGAYVCLSGYGSDELKRTYLPKMVEGVWSGT-------------MCLTEPHCGTDLGL 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLL----- 262
           + ++ +  +DG Y LSG K F+S+   D       ++LA+  +   G   +   L     
Sbjct: 176 LRTRAEPEADGSYRLSGSKMFISAGEHDLTDNIIHLVLARLPDAPKGVKGISLFLCPKYL 235

Query: 263 --EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
             EDGS    NG+    +++K+G +++AT  + F     FL+G+ +     +  M     
Sbjct: 236 VHEDGSLGARNGVSCGSIEHKMGIKASATCVMNFDGATAFLIGEPHKGLRAMFAMMNAER 295

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L   +  +     S   A  YAR R                  +I  P ++R +      
Sbjct: 296 LAVGVQGLGVAEASYQGAAAYARERLQGRSLSGAKDPEKPADPIIVHPDVRRMLLTQRAY 355

Query: 366 IAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
                AL+   A   D     +A  R +   +  ++ PI K     +        M+ +G
Sbjct: 356 AEGCRALAVLAAKQLDLSRHSDAAVRRDAEDFVALVTPIVKALLTDLGTECANLGMQIMG 415

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DL 476
           G GYI E  + ++ R++    I  G+     LD++   L      L    F  +    + 
Sbjct: 416 GHGYIRENGMEQYARDARIAQIYEGTNGVQALDLVGRKLPAHAGRLLRSFFHPVSAYIEA 475

Query: 477 GSSGKKVITILR------DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            S  K++   ++        +         A       A A+++  L   G+  +A ++ 
Sbjct: 476 NSGDKQLAEFVQPLGKAFQRLQQATAQVARAGMRDPDEAGAAASEYLRLFGLTALAYLW- 534

Query: 531 ENRFLD 536
             R  +
Sbjct: 535 -TRMAE 539


>gi|156371749|ref|XP_001628924.1| predicted protein [Nematostella vectensis]
 gi|156215913|gb|EDO36861.1| predicted protein [Nematostella vectensis]
          Length = 387

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 113/307 (36%), Gaps = 27/307 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           +++    T    +++ P++                 +  G  L+E+  G+D  A+ +   
Sbjct: 99  NLIMTYGTKEQKQEYLPQLAQH--------------MVGGFCLSEESSGSDAFALKTVAL 144

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +            W  ++  +  F+++A V    G   +   +      GL   + ++K+
Sbjct: 145 EKDGHFVLNGSKMWITNAEYAGVFLVMANVNPSEGYKGITTFIVPRETPGLSIGKKEDKL 204

Query: 280 GNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G R+++T  + F N        +LG++         M     +      +   +      
Sbjct: 205 GIRASSTCPVHFDNVKVVPSSSVLGEVGHGYKYAIGMLNEGRIGIGAQMLGLAQGCFDHT 264

Query: 336 IHYARRRHVSGGILIDQP--VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + Y   R   G  +       M+  IA++   I AA  L +  A   +       E A A
Sbjct: 265 VPYTHERRQFGRSIWSNQAWAMQHQIAEVRTKIEAARLLVYNAARRKEAGLPVVREGAMA 324

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  KY+  ++A    ++ ME +GG G+ +   I ++YR+    +I  G+ N  +  
Sbjct: 325 -------KYFASEVATLTTSKCMEWMGGVGFTKSYPIEKYYRDCKIGTIYEGTTNIQLNT 377

Query: 454 VLNLLEK 460
           +   L +
Sbjct: 378 IARELTE 384


>gi|66047905|ref|YP_237746.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63258612|gb|AAY39708.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 601

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPNGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEVVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|330906226|ref|XP_003295397.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1]
 gi|311333343|gb|EFQ96502.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1]
          Length = 437

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 144/381 (37%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+ E   PA   ++ +    GL        +          I A          
Sbjct: 80  PKAREMDEAEAMDPA---VVEQLFEQGLMGIEIPEEYGGSGMNFTSAIIAIEELARVDPS 136

Query: 148 AGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              L     T   + +    + ++ K+W PK+               T+      L+E  
Sbjct: 137 VSVLCDVHNTLVNTAIIKWGSEKLKKEWLPKL--------------ATNTVGSFCLSEPV 182

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A+ ++  +  +G        W  +S  ++ FI+ A ++       +   + +  
Sbjct: 183 SGSDAFALATKATRTDNGYKISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKG 242

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G    + + K+G ++++T  + F +     +   N+     E  K  I  L+   + +
Sbjct: 243 TPGFSIAKKEKKLGIKASSTCVITFDDV---EIPRDNLLGKEFEGYKYAIGLLNEGRIGI 299

Query: 326 SGMRVSLAEAIH-----YA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +     LA         YA   R   G ++ +   M+  +A    +I AA AL +  A  
Sbjct: 300 AAQMTGLALGAWENAASYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARK 359

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +    +AA A++MA        ++A  V  +A+E +GG G++ E    +++R+S  
Sbjct: 360 KEAGEDFIMDAAMAKLMA-------SQVAGKVSGQAIEWMGGMGFVREGLAEKYFRDSKI 412

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 413 GAIYEGTSNIQLTTIGKLLQK 433


>gi|254420863|ref|ZP_05034587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187040|gb|EDX82016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 379

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 141/403 (34%), Gaps = 29/403 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   + +   A      +L  +     RWD+ +  P    +++++   G       
Sbjct: 2   DFALTDDQRAIQDAARAFADAELAPHSA---RWDEEKHFPV--DVMKQAAEMGFCGIYTG 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +              +     +S    +  M+    +  +   + P +   
Sbjct: 57  EEHGGMALGRVEAAVIFEELSRGDVATAAFISIHNMATWMIDRFGSDALRARFVPDLVGM 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D AA+ +   +  D         +   +  SD
Sbjct: 117 E-------------KIASYCLTEPGSGSDAAALRTTAVRDGDHYVLNGSKAFISGAGTSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++ +  G  G   V  L+ +    GL +   + K+G  +  T  ++F +       L
Sbjct: 164 LYVVMVRTGGE-GAKGVSALVVEAGTPGLSFGAQERKMGWNAQPTAIVQFDDCRVPAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                L+ A  S+ G R++L  A  Y   R   G  + +   ++  
Sbjct: 223 LGEEGAGFRYAMAGLDGGRLNIAACSLGGARLALETAQDYVATRKQFGRPIGEFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A D+ AA  +  R A + D                 + K         +  EA++ 
Sbjct: 283 LADMATDLEAARLMVLRGAWAIDTDHPEK------TKWCAMAKRLATDACFQIADEALQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG GY+++  + R  R+   + IL G+   M + +   + +G
Sbjct: 337 HGGYGYLKDYPLERIVRDLRVHRILEGTNEIMRVIIAREMARG 379


>gi|300784385|ref|YP_003764676.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793899|gb|ADJ44274.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 383

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 147/412 (35%), Gaps = 42/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S    EL+ L E V S   +E         P    +    ++ D+         L  ++ 
Sbjct: 9   SWSTTELDDLRELVRSFLQKEA-------VPHQERW-AAAKKVDR--------ELWTKAG 52

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+         A   A  +   +   A  +    +    
Sbjct: 53  DVGLLCLSIPEEYGGGGGTFAHEAVLYEEQARAGDGAWGVTVHNGIVAHYLLAYASEDKK 112

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           ++W PK+ S E                 + +TE   G+D+  I ++  +  D  Y L+G 
Sbjct: 113 REWLPKLASGEM-------------VGAIAMTEPGTGSDLQGIKTRAVRDGDH-YVLNGA 158

Query: 232 KWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++ +    +++A + +   G   V  ++ +    G    R+ +K+G +   T EL 
Sbjct: 159 KTFITNGLHADLVVVACKTDPDAGAQGVSLIVVETDTPGFRRGRVLDKVGLKGQDTAELF 218

Query: 291 FSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L      G ++ M  L    L  A+ +V+G+  ++   + Y + R   G
Sbjct: 219 FDDVRVPAGNLLGDAEGQGFIQLMLQLPQERLIIAVTAVAGLEAAVDLTLEYTKERTAFG 278

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +      K  +       A A   +       D+   R  +       A + K W  +
Sbjct: 279 RPIFSFQNTKFKL-------AEAATEAAVARAFLDQCIERHLKGELDVQGAAMAKLWTTE 331

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               VI + ++  GG GY+ E  IAR + +   + I  G+   M   +   L
Sbjct: 332 RVNKVIDDCVQLFGGYGYMTEYPIARAWADVRISRIFGGTSEIMKEIISRSL 383


>gi|301632572|ref|XP_002945356.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis]
          Length = 377

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 120/371 (32%), Positives = 186/371 (50%), Gaps = 13/371 (3%)

Query: 202 LTEKRGGTDIAAITSQGQ--KISD------GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           +TEK+GG+D+    +  +     D        Y L+GHKWF S P SD F  LA+V+  +
Sbjct: 1   MTEKQGGSDLRETQTTARFSHAGDYHGATAHWYELTGHKWFCSVPQSDGFFTLAKVDDGI 60

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CF +PR L DGS N    QRLK+K GN+SNA+ E+E++ T    +G        +    
Sbjct: 61  TCFFLPRTLPDGSHNRFFVQRLKDKAGNKSNASSEVEYAGTLAIRVGAEGRGIREILSHA 120

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            L  LD AI S   MR +L  A+ +   R+  G  + D+P+M   +AD+A+++ AAT ++
Sbjct: 121 HLTRLDFAIGSAGLMRQALTLALRHTSTRNAFGSTIADRPMMTNVLADMAVEVEAATLMA 180

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R+A + D   +   E   AR+  P  K++ C  AP++  EA++C GG+G+IEE  +AR 
Sbjct: 181 LRVAKATDLMGTSVHERLLARVATPAAKFFNCSRAPSIANEALQCHGGNGFIEENPMARV 240

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491
           YRE+P NS+  G+ N M +DV   + +     + L   L    G   +   ++      +
Sbjct: 241 YREAPLNSVWEGTANMMCMDVRRAMVRDARTIDALLDELRPLAGQDARFDALVAHTERLV 300

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR---FLDNCHSTHCMLHGR 548
               +D+ LAR +TE +A     A + R    + AD FL  R         S +  L   
Sbjct: 301 RAALDDEFLARPMTEAVARVLQGAEMLRHASQEAADAFLATRAPGAGGAWGSHYGTLAAP 360

Query: 549 FNAAHIIDSLY 559
            + A     +Y
Sbjct: 361 VSQAAARKIMY 371


>gi|158522175|ref|YP_001530045.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511001|gb|ABW67968.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 605

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 91/444 (20%), Positives = 163/444 (36%), Gaps = 56/444 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+   ++  +           +  D  F          + AA  +  A +        +
Sbjct: 71  QVKTPESFKRIFDLYCEGEWIGASEDPEFGGQGMPNVLNLAAAEFFSGASMAFMMYPGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A M+  + T    K +   +++ ++  T             + LTE   GTD+ A+T
Sbjct: 131 HGAAKMIESLGTEEQKKIYVKNMYTGKWAGT-------------MLLTEPDAGTDVGALT 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED 264
           +  +K  DG Y ++G+K F+S+   D        +LA++EG       +  F+VP+   +
Sbjct: 178 TTAKKNDDGTYSITGNKIFISAGEHDMTENIIHPVLARIEGAPAGTRGISLFIVPKYRVN 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILI 316
                G  N +    ++ K+G   NAT  L      N  G LLG  N     +  M    
Sbjct: 238 PDGSLGEFNDVVCTGIEEKMGIHGNATCSLTLGGKGNCIGTLLGQENKGMKAMFLMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------------LIDQPVMKRAIADIA 363
                +   S    S A A+ YA+ R   G               +I  P ++R +  + 
Sbjct: 298 RFGVGVQGFSLGATSFANAVAYAKERIQ-GRELLKFMDADAPSVNIIKHPDVRRQLLVMK 356

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             +    AL + +A  FD      E+  + +  A    + P+ K +C      V    M+
Sbjct: 357 SYVEGMRALLYYVARCFDMERVLEESDEKEKYKALIEFLIPVVKAYCTDKGFEVCVLGMQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475
             GG GYI E    +  R+    SI  G+     +D+L   L  KG      L   +   
Sbjct: 417 VYGGYGYIAEYPQEQLVRDCKITSIYEGTNGVQAMDLLARKLGMKGGKPLMDLMGEMGNT 476

Query: 476 LGSSGKKVITILRDSISLCKEDKG 499
           +  +  K +  L++     ++   
Sbjct: 477 VAQA--KAVDGLKELAESVEKASA 498


>gi|154250919|ref|YP_001411743.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154869|gb|ABS62086.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 385

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 134/382 (35%), Gaps = 33/382 (8%)

Query: 85  HAYGPGGERWDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
             + P  ERW+        AW      +   G+ C+     +        H++  A    
Sbjct: 29  KEFQPHVERWEDQGCVDRDAWLK----AGEAGILCASIKEEYGGGGGNFGHEMVIAEEQG 84

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A +        S   A  +    T    K W PK+ S E             +   + +
Sbjct: 85  RAGISGFGNSVHSGIVAHYIQSYGTEDQKKKWLPKMASGE-------------IVGAIAM 131

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL 261
           TE   G+D+  + +  +K  +  Y ++G K F+++      I ++A+ +   G      +
Sbjct: 132 TEPGTGSDLQGVKTTAKKSGN-QYVVNGQKTFITNGQQANLICVVAKTDPAGGAKGTSLI 190

Query: 262 LEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--I 316
           + +     G    R   K+G ++  T EL F          L      G  + M+ L   
Sbjct: 191 MVETDEVEGFRRGRNLKKMGQKAQDTSELFFDEVKVPTSNLLGTEEGKGFFQLMQQLPQE 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ +   M ++L     Y + R   G  ++D    +  +A+   +   A       
Sbjct: 251 RLIIAVQACVAMEMALKYTTDYVKERTAFGQRILDFQNTQFKLAECKTEATIARVFVDDC 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A    + K  +  AA A+        W  +    +I   ++  GG GY+ E  IA+ Y  
Sbjct: 311 AVKLLDGKLDATTAAMAKW-------WTTQKENEIIDTCLQFFGGYGYMMEYPIAKLYTN 363

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+   M + V   L
Sbjct: 364 ARIQKIYGGTNEIMKMLVARTL 385


>gi|73998964|ref|XP_535048.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short/branched chain
           specific, mitochondrial precursor (SBCAD) (2-methyl
           branched chain acyl-CoA dehydrogenase) (2-MEBCAD)
           (2-methylbutyryl-coenzyme A dehydrogenase)
           (2-methylbutyryl-CoA dehydrogenase)... [Canis
           familiaris]
          Length = 521

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 133/361 (36%), Gaps = 31/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVAL 164
           ++      GL     +  +          I               +     T  + ++  
Sbjct: 182 IIEGLFQQGLMGIEIETKYGGTGASFFSSILVIEELAKVDASVALVCDIQNTVINNLMRK 241

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      +  K+               T     + L+E   G+D+ A+ ++  K  + 
Sbjct: 242 YGTEEQKATYLTKLT--------------TEKVGSICLSEAGAGSDLFALKTRADKKGNY 287

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  ++  +  F+++  V   +G   +   + D    GL   + + K+G R++
Sbjct: 288 YVINGSKMWISNAEYAGLFLVMVNVNPDLGYKGLTCFVVDRDTEGLHIGKSEKKMGIRAS 347

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HY 338
           +T  L F N        L  +  G    + I   L+   + ++   + LA+        Y
Sbjct: 348 STCALTFENVKVPESNILGQIGHGYKHAIGI---LNEGRIGIAAQMLGLAQGCFDYTVPY 404

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D   ++  +A +A  + AA  L++  A   +  K   +EA+ A     
Sbjct: 405 MKERMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNTARLLETGKPIIKEASMA----- 459

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+  ++A    ++ +E +GG GY ++  + +++R++   +I  G+ N  +  +   +
Sbjct: 460 --KYYAAEVAGLTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGTSNIQLNTIAKCV 517

Query: 459 E 459
           +
Sbjct: 518 D 518


>gi|307946381|ref|ZP_07661716.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4]
 gi|307770045|gb|EFO29271.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4]
          Length = 390

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 138/377 (36%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P  E+ D+ ++ P    L       GLH    +  +         H I    +   +
Sbjct: 31  RIAPLAEKIDREDWFP--RELWPEMGDMGLHGITVEEEWGGAGLGYLEHCIAMEEVSRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +         K +  K+ + E+                L ++E
Sbjct: 89  ASIGLSYGAHSNLCVNQLRRWGNEDQKKRYLSKLVTGEH-------------LGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  + P +D  I+ A+ +   G   +   L +
Sbjct: 136 PGAGSDVVSMKLKAEKKGDRYILNGNKMWITNGPTADTLIIYAKTDPDAGPKGITAFLVE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L      V  +   +  + A+++
Sbjct: 196 KDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPAENVLGEVGRGVNVLMSGLDYERAVLA 255

Query: 325 VSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                 M+ ++   I Y   R   G  +    +++  +AD+ + + A+ A  + +A + D
Sbjct: 256 AGAVGIMQAAMDVVIPYIHERKQFGQSIGTFQLVQGKVADMYVSMNASKAYVYAVAQACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  E+AA A         +  + A  +  +A++ +GG+GYI E    R  R++    
Sbjct: 316 RGETTREDAAGA-------ILYAAENATKMTLDAIQLLGGNGYINEYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   +
Sbjct: 369 IGAGTSEIRRMLIGREI 385


>gi|158522377|ref|YP_001530247.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511203|gb|ABW68170.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 601

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 87/452 (19%), Positives = 162/452 (35%), Gaps = 58/452 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV    ++                 D  +      Q     A   +  A          +
Sbjct: 71  KVAVPESFKKAYDLLREGEWTAMTEDPEYGGQGMPQVVSRAANDYFQGANYAFMLYAGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +  +V +  T    + +  K+++ E+  T             + LTE   G+D+ A+T
Sbjct: 131 HGAGRLVEVFGTQEQKETYLKKLYTGEWSGT-------------MLLTEAEAGSDVGALT 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED 264
           +   K  DG Y +SG K F+S    D        +LA++EG       +  FLVP+   +
Sbjct: 178 TTAVKNPDGTYSISGSKIFISGGEHDMTENIIHPVLARIEGAPPGTRGISLFLVPKYRVN 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                G  N +    ++ K+G   ++T  L         G LLG  N     +  M    
Sbjct: 238 ADGSLGDFNDVVCTGIEEKMGIHGSSTCSLTLGGKGKCIGTLLGQENKGMSAMFVMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIAL 364
            L   + +      S   A++YA+ R               G  +I  P ++R + ++ +
Sbjct: 298 RLLVGMQAFGCATASYMSALNYAKERIQGRPLTAGKDASVGGVPIIRHPDVRRQLMNMKV 357

Query: 365 DIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +    +L + +    D A      + + +      I+ PI K +    A  V +  ++ 
Sbjct: 358 MVEGMRSLHYYVGYCQDMAVLAGTEEEKEKYEGLVDILTPIAKGYGTDKAFEVCSHGVQV 417

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL 476
            GG GY +E  + ++ R+     I  G+     +D+    +  K   L   LF  + + +
Sbjct: 418 YGGYGYTKEYPVEQYLRDCRITMIYEGTNGIQAMDLFGRKMTMKKGKLVMDLFGEIMKTV 477

Query: 477 GSSGKKVITILRDSISLCKE----DKGLARFL 504
            ++  K I  L+D+    +         AR L
Sbjct: 478 NAA--KAIDSLKDAAEKVEASLNKLGEAARHL 507


>gi|120555033|ref|YP_959384.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120324882|gb|ABM19197.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 382

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 145/411 (35%), Gaps = 43/411 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
            V  +EL L  E V+     E+A              P  E W+K    P    L     
Sbjct: 4   PVDQEELALFRESVIKALETEVA--------------PHYEAWEKSGIVP--RELWNTLG 47

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH--LMSPSVTSASMVALMTTPR 169
             G+ C               + +            A    +M  S   A  ++ +   +
Sbjct: 48  DAGMLCVDVPEDCGGCGAPFQYSVVVGEELARLGFGALSTNVMVHSDIVAPYLSHIGNEQ 107

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + W PK+ S E                 + +TE   G+D+ A+ +   K  D  Y L+
Sbjct: 108 QKQQWLPKMVSGE-------------AVGAIAMTEPGAGSDLQAMRTSAVKDGDD-YILN 153

Query: 230 GHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++   +D  I+ A+ + + G   +   L D S  G    R  +KIG  S  T E
Sbjct: 154 GSKTFITNGQHADMVIVAAKTDPKAGAKGISLFLVDTSLPGFSKGRNLDKIGQHSGDTSE 213

Query: 289 LEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L FS+        L     G V  M+ L    L    + V+  R SL   I YA+ R + 
Sbjct: 214 LFFSDMRVPASALLGEEGQGFVYLMRELPRERLVIGALGVAAARGSLDMTIQYAQERELF 273

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L      +  IA +  D     A   +    ++E K            A + KY   
Sbjct: 274 GQKLSQLQNTRFEIARMETDYRINKAFVDQCIREYEEGK-------LDAPTASMAKYSAT 326

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +M   V    ++  GG GY  E  I+R++ ++    I  G+   M   +  
Sbjct: 327 EMQCRVADGCLQLFGGYGYTTEYPISRNFIDARVQRIYGGTSEVMKEIIAR 377


>gi|148547881|ref|YP_001267983.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511939|gb|ABQ78799.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 592

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 97/520 (18%), Positives = 183/520 (35%), Gaps = 61/520 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVH--KELELLGEYVLSCTAQELA--RMANYNTPQLH 85
               M+       L   + + P+      EL  + +   +    E A   +A    P   
Sbjct: 7   PLRDMDF------LFNEVFDIPTWWAQTPELAEVVDGDTARAILEQAGKLIAERVAPLNR 60

Query: 86  AYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           +    G RW+  +V     +    R    DG      D ++  +   +    +   +   
Sbjct: 61  SGDEQGCRWEAAQVRTPDGFADAYRAFAADGWVGVAGDPAYGGMGMPKVIGAQLEEMLNA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G     +  +   +    +  +   + P ++   +             A  + LT
Sbjct: 121 ANLSFGLYPMLTAGACLALLNHASEALQALYLPPMYQGRW-------------AGSMCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  I ++ Q ++DG Y +SG K F++    D       ++LA++         
Sbjct: 168 EPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHLVLARLPDAPAGPKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  FLVP++L D     G  N +    +++K+G +++AT  + F    G+L+G+ N    
Sbjct: 228 ISLFLVPKVLVDVDGVLGEANAVSCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLN 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVM 355
            +  M     L   I  ++    S   AI YAR R              S   +I  P +
Sbjct: 288 AMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEAPSQSADPIIVHPDV 347

Query: 356 KRAIADIALDIAAAT------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  +              AL   LA   D+  +R+   A   ++ P+ K +   M  
Sbjct: 348 RRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDPATRANAEAKVALLTPVAKAFLTDMGL 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
                  + +GG GYI E    +  R+     I  G+     LD++   L   G   +  
Sbjct: 408 ETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLVGRKLFGDGGKAYRG 467

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           L   +     +            ++       L+ +L ++
Sbjct: 468 LSDEIVSFAQALPVAHAEFSAPLLAAVHNLDALSAWLLDR 507


>gi|167644103|ref|YP_001681766.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346533|gb|ABZ69268.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 133/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL        +        H+        +  ++   +   +   A  + 
Sbjct: 48  REMWNKAGRAGLLGLTVPEEYGGAGGDYRHEAVLMEQLGLKGVDGFGISLHNAIVAPYIF 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P++ + E             +   + +TE   G+D+  I S  + + D
Sbjct: 108 HYGTEEQKQRWLPRLCTGE-------------LVGAIAMTEPGAGSDLQGIKSSAKVVGD 154

Query: 224 GIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGN 281
             Y ++G K F+++  +    I++ + +   G      ++ +     G    R  +K+G+
Sbjct: 155 -QYVINGSKTFITNGQTANLIIVVVKTDPTAGARGTSLIVVETDGAEGFERGRNLDKLGH 213

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F++        L      G  + M  L    L+ A+  ++ +  +L   I 
Sbjct: 214 EAQDTSELFFNDVKVPTENLLGSDEGQGFFQLMGQLPQERLNIAVQGMATIERALELTID 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +ID    +  +A+   +   A            + +  +  A+ A    
Sbjct: 274 YVKQRKAFGKAIIDFQNTQFVLAECKTEATVAKVFVNHCIERHLKGELDAATASMA---- 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW   +   ++   ++  GG G++ E  IAR YR+S    I  G+   M L +   
Sbjct: 330 ---KYWVSDLENKIVDRCLQLFGGYGFMNEYPIARMYRDSRVQRIYGGTNEIMKLLIART 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|330956960|gb|EGH57220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 601

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 87/489 (17%), Positives = 182/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DLAHGGQGLPESLGLAVSEMVGSANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   ++    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEIAFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSR 386
                           +I  P ++R +  +        A+ +  A         D+A+ +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSDDAEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQVYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   G+ G + +      ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTRIVHKFCQGNEGNEAVQEFVTPLAALNKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|148651933|ref|YP_001279026.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571017|gb|ABQ93076.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 606

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 90/475 (18%), Positives = 174/475 (36%), Gaps = 62/475 (13%)

Query: 69  TAQELARMA-NYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             Q +A  A N  +P        G  ++   V     +     + +  G     +   + 
Sbjct: 42  ILQGMADFAENILSPLYQPADAEGCHFENGVVTTPKGFKDAYNQFVEGGWQGISYPEEYG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREY 183
            +       +   +  +M        M P +T+  +  LM   T      + PK+    +
Sbjct: 102 GMNLP--MSLNLIKSEMMGTANWPWAMYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTW 159

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-- 241
             T             + LTE + GTD+  + ++     DG Y L+G K F+SS   D  
Sbjct: 160 SGT-------------MCLTEPQAGTDLGQVKTKAVPQEDGSYTLNGTKIFISSGEHDLT 206

Query: 242 ---AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATV 287
                I+LA++         +  F+VP+       E G  NG+    +++K+G  S+AT 
Sbjct: 207 DNIIHIVLARLPDAPEGTRGISLFIVPKFNINEEGEAGERNGVSCGSIEHKMGIASSATC 266

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---- 343
            L F N  G+L+G+ N     +        + + I  ++   ++   A+ YA+ R     
Sbjct: 267 VLNFDNAKGYLIGEPNRGLKAMFTFMNTARIGTGIQGLAHCELAFQNALPYAKERRSMRT 326

Query: 344 VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAKSR 386
           +SG          +I+   ++R +  +        ++ +  A   D           +  
Sbjct: 327 LSGTKEPEKVADAIINHADVRRMLLTMKAFAEGGRSMIYHAARYADKMSQGVAENNNEEF 386

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +         PI K +  ++A     E  +  GG GYI+E  +    R++  +++  G+
Sbjct: 387 EKWDDKLGFYTPILKGFLTELAIEAAKEGQQVYGGHGYIKEWGMELIARDARISTLYEGT 446

Query: 447 GNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKE 496
                LD+L    +L+    +     S++ +  G     K +   +     LC E
Sbjct: 447 TGVQALDLLGRKVILQSKGKIIRDYTSSIMKWCGEYALDKNMRKFVWALTKLCAE 501


>gi|332716278|ref|YP_004443744.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325062963|gb|ADY66653.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 417

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 81/426 (19%), Positives = 160/426 (37%), Gaps = 40/426 (9%)

Query: 40  DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF 99
           D++ + L A F + +  E+  L +   +    E+A +A                 D+ + 
Sbjct: 26  DAMSLNLAAIFDADLGPEIAALRDSARAFADDEIAPLA--------------AEIDRNDQ 71

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTS 158
            P    L  R    GLH       F        AH +    +   +        + S   
Sbjct: 72  FP--RQLWPRMGELGLHGITVSEEFGGADMGYLAHCVAMEEISRASASIGLSYGAHSNLC 129

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            + +    T    + + PK+ S E+                L ++E   G+D+ ++  + 
Sbjct: 130 INQIHRWGTEEQKRRYLPKLVSGEH-------------VGSLAMSETEAGSDVVSMRLKA 176

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W  +   +D  ++ A+ +   G   +   L + S  G    +  +K
Sbjct: 177 DRKGDVYVLNGTKMWITNGHEADTLVVYAKTDMSAGARGITAFLIEKSFKGFRPAQKLDK 236

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEA 335
           +G R + T ELEF+         L      V  +   +  + A+++   V  M+ ++   
Sbjct: 237 LGMRGSPTSELEFTECEVPEENILGRLNDGVTVLMSGLDYERAVLAAGPVGIMQAAIDLV 296

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YAR R   G  + +  +++  +ADI   + A+ A  + +A + D  +   ++AA A  
Sbjct: 297 LPYARERKQFGKPIGEFQLVQGKLADIYSAMNASRAYVYAVARACDNGRITRQDAAGA-- 354

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  +  + A  V  +A++ +GGSGY+ E    R  R++    I  G+     + + 
Sbjct: 355 -----ILFAAERATRVALDAIQLLGGSGYVNESPAGRLLRDAKLYEIGAGTSEIRRMLIG 409

Query: 456 NLLEKG 461
             L KG
Sbjct: 410 RELVKG 415


>gi|313126840|ref|YP_004037110.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312293205|gb|ADQ67665.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 387

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 69/405 (17%), Positives = 150/405 (37%), Gaps = 29/405 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   +++  M +    +     P     D+ +  P    L+      GL    +  
Sbjct: 7   DFALSAEQRQIRDMVSEFVDE--EIRPRAAEIDETDEFPD--DLISEMAELGLMGMPFPE 62

Query: 123 SFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            ++       ++ I    +   +      + + +  + +M+         +++   + + 
Sbjct: 63  EYDGAGLDYHSYAIGLEEISRGSGGLGTVVAAHTSLAGNMLYEFGDEAQKQEYLTSLNTG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   L+E   G+D+ A+ +   K  D      G  W  +  ++D
Sbjct: 123 E-------------DIGAFALSEAGAGSDVPAMDTTATKDDDEYVINGGKLWISNGSVAD 169

Query: 242 AFIMLAQVEGRVGCFLVPRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              + A+ +   G   +   +      +G   +  ++K+G++   T EL F         
Sbjct: 170 TVTVFAKTDPDAGNKGISSFVVRPEEDDGFIVEGTEDKLGDKGCPTAELRFDEMRIPEDR 229

Query: 301 DLNV-STGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G V+ +K      +  A  S+   R +L +A+ YA  R      + +   +K 
Sbjct: 230 LLGEEGEGFVQALKTLNGGRITIAARSIGIARAALDDAVAYADDREQFDQPIAEFQAIKH 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   + AA  L  + A+     +S  +EAA A       K +  +++  V  E ++
Sbjct: 290 KLADMDTKVQAAKMLMHKAADLKIRGESYIKEAAQA-------KLYASEISREVANEGIQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             GG GY ++    R+YR++  N I  G+   +   + + L +  
Sbjct: 343 IHGGYGYTKDFPAERYYRDAKLNEIYEGTSEILRNTIGDRLRQEQ 387


>gi|240140922|ref|YP_002965402.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
 gi|240010899|gb|ACS42125.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
          Length = 587

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/535 (19%), Positives = 208/535 (38%), Gaps = 71/535 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAW 103
           +A   +V+ +    +G        +E  R+A      L+      G  +   +V   P W
Sbjct: 17  VAGLDAVLAQSGAEIGPDDAVAILEEAGRLAGNVIAPLNRVGDRHGTPFSDGRVTTAPGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +  R  +  G +  +    +        H I AA   +         + P +T+  + A
Sbjct: 77  ASAYRAFVEGGWNGVLAAPDYGGQGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGVEA 134

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    +  +   +  K+ S E+                + LTE + G+D++A+ ++ +  
Sbjct: 135 LAAHGSDELKGRYLEKLVSGEW-------------TATMNLTEPQAGSDLSALRTRAEAQ 181

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K +++    D       ++LA+++        +  FLVP++L DGS N L
Sbjct: 182 GDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPAGTRGISLFLVPKVLPDGSRNDL 241

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G  ++ T  + F +     G+L+G+ N     +  M     L+  +  V  
Sbjct: 242 RCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRGLACMFTMMNSARLNVGLQGVGV 301

Query: 328 MRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              ++    ++R +  +    AA+  + +  A  
Sbjct: 302 AEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQRTLLTMKAYTAASRGICYLTAQG 361

Query: 380 FDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++
Sbjct: 362 LDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMRDA 421

Query: 438 PANSILLGSGNAMVLDVL------------------------NLLEKGTNLFEQLFSTLE 473
               I  G+     +D++                         LL+ GT  F    + L 
Sbjct: 422 RILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIASMRRVAEGLLKDGTPGFGHAAARLR 481

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSAAALYRAGMNDIA 526
           + +G S  +  + L  +++  +  + L  A        L   AA L  AG+   A
Sbjct: 482 EGIG-SLDRATSFLLKALASNRPQEALPGATPYLRLFGLVQGAACLATAGLASSA 535


>gi|171060874|ref|YP_001793223.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170778319|gb|ACB36458.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 376

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 139/380 (36%), Gaps = 32/380 (8%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P   RWDK    PA    L+     G +       ++       A  I    +    
Sbjct: 21  QIAPHAARWDKEHHFPA--EQLKGLAALGCYGVAVPAEYDGAGLDYLALAIILEEIGAGD 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  +   +    S++         + +               P+ +  +     LTE
Sbjct: 79  GGTSTVVSVNNCPVCSILMAFANEAQKQQFLK-------------PLARGEMLGAFCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G++   + +   +  D  Y L G K F++S    D  I++A  +   G   +   L 
Sbjct: 126 PHVGSEAGGLKTTAVRDGDH-YVLDGVKQFITSGQHGDVAIVMAVTDKAAGKRGISAFLV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             S  G    RL++K+G  S+ T ++ F          L      ++    L  L+   +
Sbjct: 185 PTSTPGYTVARLEDKMGQHSSDTAQINFDQCRIPASYRLGEEGQGLK--IALSGLEGGRI 242

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   V +       A+ Y++ R   G  + +   ++  +AD+A+ I AA  L +  A+
Sbjct: 243 GIASQSVGMARAAFEAALAYSKDRIAFGTAIFNHQAVQFRLADMAMQIEAARQLIWHAAS 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D      +EAA A       K +  +MA  V + A++  GG GY+ +  + R YR+  
Sbjct: 303 LKDAGLPCLKEAAMA-------KLFASEMAEKVCSAAIQTFGGYGYVSDFPVERIYRDVR 355

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+ +   + +   L
Sbjct: 356 VCQIYEGTSDVQRILIGRAL 375


>gi|149692066|ref|XP_001503597.1| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) [Equus caballus]
          Length = 426

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 121/379 (31%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D            ++  + G+        +         H +    +   
Sbjct: 62  EHLAPQAHEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 121

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S E+                L ++
Sbjct: 122 SGAVGLSYGAHSNLCLNQIVRNGNEAQKEKYLPKLISGEH-------------IGALAMS 168

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   
Sbjct: 169 EPNAGSDVVSMKLKAEKKGDHYILNGNKFWITNGPDADILIVYAKTDLAAVPPSRGITAF 228

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +        L         +     L  L
Sbjct: 229 IVEKDMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPATNILGHPSKGVYVLMSGLDLERL 288

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L  +I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 289 VLAGGPLGLMQAVLDHSIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 348

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    S++             +  + A  V  + ++C G +GYI +  + R  R++ 
Sbjct: 349 ACDEGHCTSKD-------CAGVILYSAECATQVALDGIQCFGANGYINDFPMGRFLRDAK 401

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 402 LYEIGAGTSEVRRLVIGRA 420


>gi|209551947|ref|YP_002283863.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539540|gb|ACI59471.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 381

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 130/376 (34%), Gaps = 25/376 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W+     P    L       G          +     +           MA
Sbjct: 22  QRIAPHAMEWEDQGTIP--RNLWSEVAELGFGGIYVSEEHQGTGLTRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       M+    T      W P I S E                   LTE
Sbjct: 80  CPSVASFISIHNMCGGMIDKFGTEINKSQWLPGICSME-------------TIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA++++ +++++G        +      SD ++++A+  G  G   +   + +
Sbjct: 127 PGAGSDAAALSTKAERVTNGWRLNGAKAFISGGGYSDIYVVMART-GEAGPKGISAFVVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL +  L+ K+G ++  T +++F +    FG L+G+                L+ A
Sbjct: 186 KGTPGLSFGALEKKMGWKAQPTAQVQFDDCIVPFGNLIGEEGRGFSYAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++ G + +  +++ Y   R   G  L     ++  +AD+   + ++  L  + A   D
Sbjct: 246 ASALGGAQTAFEQSLRYMGERKAFGQTLDRLQALQFRVADMETKLQSSRVLLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A         A     + K      A  V  + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 QAAPD------ATKFCALAKLHVTDAAFDVANQCLQIHGGYGYLADYGIEKLVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNL 457
           IL G+   M + +   
Sbjct: 360 ILEGTNEIMRVIISRA 375


>gi|312109623|ref|YP_003987939.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311214724|gb|ADP73328.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 594

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 164/447 (36%), Gaps = 60/447 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +            A   +    +     +  + L
Sbjct: 66  QLLRKAGELGLLSADIPEEYGGLGLDKISSALIGEKMSRAGGFSISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKRKYLPSLATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D FI+ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNAGFADVFIVYAKVDGEH----FSAFIVERGFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  V  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENLLGEVGKGHVIAFNILNIGRYKLGVGAVGGAKRALEITLQYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + A  +  +R    FDE             K  +
Sbjct: 289 NQRQQFKQPISKFSLTQEKFATMASRLYATESSVYRTVGLFDERMGLLDEEKAKDGKEIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  +    ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATETLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L LL+K   L E+L     +++G               + +
Sbjct: 409 EINRLLVPGMYLKKAMKGELPLLQKAQQLQEELIMLAPEEVGD-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAGM 522
           ++K L R   +KIAL ++  A  R G 
Sbjct: 456 QEKYLVRN-AKKIALMAAGLAAQRFGP 481


>gi|78222919|ref|YP_384666.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194174|gb|ABB31941.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 386

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 132/358 (36%), Gaps = 23/358 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L++    G         +            A      A       +S +  +A ++ ++ 
Sbjct: 44  LKKLAELGFMGLNVREEYGGAEAGAISFSVAMTEIARACASTAVTVSVNNMAAEVIQVVG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PKI S EY             A    LTE   G+D A + +Q     D   
Sbjct: 104 SEEQKRAYIPKICSGEYS------------AASFALTETCAGSDPAGMVTQAVDDGDSWV 151

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 +  S+  +  F++ A  +        +   L +    GL   + ++K+G  ++A
Sbjct: 152 LNGSKIFITSASYAGVFVVWAVTDKAAPKGKGISCFLVEAGTPGLIIGKEEHKMGQHASA 211

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T E+ F++       ++G LN              +    + +     ++  A  YA  R
Sbjct: 212 TNEVIFTDCRIPKSAMMGKLNDGFRIAVAELAGGRIGIGSLGLGVGLAAMDHATRYASER 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   ++  +AD   ++ AA  L    A   D+ KS ++EA+ A       K 
Sbjct: 272 TQFGQKISNFQAIQWMVADAYTELEAARLLLMNAAFRKDQGKSFAKEASMA-------KL 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  + A      A++ +GG GY ++  + R+ R++   SI  G+     + +   + K
Sbjct: 325 YATEAANRACYAAIQMLGGYGYTQDFPVERYARDARITSIYEGTSEIQRVVISREILK 382


>gi|306839890|ref|ZP_07472688.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
 gi|306405076|gb|EFM61357.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653]
          Length = 592

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/547 (16%), Positives = 194/547 (35%), Gaps = 58/547 (10%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +     AA ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQDDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
            +    AR  T+ +  A++      A         L +      +     L G   A  +
Sbjct: 497 SKAISEAREATDWLQKATAEGRAEEALSGATPYQRLLSLTAGGAYLARAALAGDDAARAV 556

Query: 555 IDSLYLD 561
           +   + +
Sbjct: 557 LCRFFAE 563


>gi|163844406|ref|YP_001622061.1| hypothetical protein BSUIS_B0224 [Brucella suis ATCC 23445]
 gi|163675129|gb|ABY39239.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 380

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 135/359 (37%), Gaps = 32/359 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LTE   G+D A++ +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTEPDAGSDAASLKTTAVRDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T +
Sbjct: 152 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ +     R  
Sbjct: 212 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTL----DRKQ 267

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 268 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 320

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 321 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 379


>gi|327440690|dbj|BAK17055.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 391

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 127/370 (34%), Gaps = 31/370 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D++     W  L       G  C   +  +          I  +            +   
Sbjct: 45  DRIVPRELWLKL----GSQGFLCPSVEEKYGGTGLDFIFDIVLSEELSKVGGGLSGIGLH 100

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T      + PK  S E+                + +TE   G+D+  +
Sbjct: 101 SNVVTPYITSFGTEEQKMKYLPKFVSGEW-------------ISAIAMTEPGAGSDLQKM 147

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLC 271
           T+   K     Y ++G K F+++ + SD  I+  + + +       V  L+ +    G  
Sbjct: 148 TTTAVKDGSD-YIVNGQKTFITNGILSDVIIIACKTDPKAVPAHNGVSLLIIERGMEGFS 206

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R  +K+G  S  T EL F N       LLG+       +        L +A+ +++  
Sbjct: 207 RGRKLDKVGMHSQDTAELIFENVRVPAENLLGEEGKGFLYLMQKLQQERLLTAVGAITAA 266

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  L   + Y + R   G  +      +  +A+IA  +         L     E +    
Sbjct: 267 KDMLDLTLQYVKEREAFGKPIGKFQNTQFTLAEIATQVKIGQTFVDDLILRHLEGQDLVT 326

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E + A+        W   MA  +  E M+  GG GY+EE  IAR +R+     I  GS  
Sbjct: 327 EVSMAKW-------WTTDMARKISVECMQLHGGYGYMEEYKIARRFRDIAVTPIFAGSNE 379

Query: 449 AMVLDVLNLL 458
            M + +   L
Sbjct: 380 IMKVIIAKNL 389


>gi|295677259|ref|YP_003605783.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295437102|gb|ADG16272.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 596

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/474 (20%), Positives = 187/474 (39%), Gaps = 67/474 (14%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-H 100
           IA  P      L+           +E A++       L      G+R      D V    
Sbjct: 23  IAKLPGFEDANLD-----TARAVLEESAKLC---GEVLAPLNVDGDRNPSSWKDGVVTAT 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +    R+    G         +E     +   I    + ++        + P +T  +
Sbjct: 75  PGFSDAFRQFAAGGWQGVQHPLDYEGQGLPK--LIGTPCVEMLNASNLSFALCPLLTDGA 132

Query: 161 MVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           + AL+T  +    + + PK+ S E+  T             + LTE + G+D+A + ++ 
Sbjct: 133 IEALLTAGSEAQKQTFVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
           +   DG + L G K F++    D       ++LA+          +  FLVP+ L +   
Sbjct: 180 EPQGDGSFKLFGTKIFITWGEHDMAKNIVHLVLARTPDAPDGVKGISLFLVPKFLVNEDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
             G  N +    +++K+G +++ T  L+F +     G L+G+ N     +  M       
Sbjct: 240 SLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGALGQLIGEENRGLEYMFIMMNAARFA 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAAT 370
             +  V+    +  +A+ YA+ R  S            +I  P ++R ++ +     A+ 
Sbjct: 300 VGMQGVAISDRAYQKAVAYAKERVQSRPVDGSAKQSVAIIQHPDVRRMLSTMRSLTEASR 359

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL++  A   D A    ++A  A+  A      PI K W  +++  V +  ++  GG G+
Sbjct: 360 ALAYVAAAHCDIAHRHPDDATRAKHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGF 419

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDL 476
           IEE   A++YR++    I  G+      D++    L  G  + ++L + + + +
Sbjct: 420 IEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTLRDGGKVAKELLAGIAETV 473


>gi|258654336|ref|YP_003203492.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258557561|gb|ACV80503.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 386

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 134/400 (33%), Gaps = 33/400 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             +    ++LA          H   P     D+ E +P      +     G         
Sbjct: 17  RAVREAIRDLAE---------HEIAPHAADVDERERYPI--EAQKALTAAGFQAVHIPEE 65

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +E         +            +  + + +   +  + L  +  + +   P I S E 
Sbjct: 66  YEGAGADAVATVIVIEEVARVCGSSSLIPAVNKLGSMPLLLSASEELKQQVLPSIASGE- 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                         I   L+E+  G+D AA+ ++  +  D         W  ++ +S  +
Sbjct: 125 ------------AMISYALSEREAGSDAAAMRTRAVRDGDDWVLNGTKCWITNAGVSSWY 172

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
            ++A  +       +   +      G      + K+G + + T E+ F N       ++G
Sbjct: 173 TVMAVTDPDKRAKGISAFVVHADDPGFVVGSKERKLGIKGSPTREIHFENCRIPGDRIVG 232

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +                      ++   + +L  AI Y + R   G  L +   ++  +A
Sbjct: 233 EPGTGFATAMATLDHTRPTIGAQAIGLAQGALDVAIGYIKERRQFGRHLAEFQGLQFMVA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L ++ A + +   +          ++   K     +A  V  +A++ +G
Sbjct: 293 DMAMQIDAARTLVYQAAAAAERGDANK------TYLSAAAKCLASDVAMKVTVDAVQLLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+GY  +  + R  R++    I  G+     L +   L K
Sbjct: 347 GAGYTRDFPVERMMRDAKITQIYEGTNQVQRLVMARALLK 386


>gi|27377768|ref|NP_769297.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27350913|dbj|BAC47922.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 592

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/515 (20%), Positives = 199/515 (38%), Gaps = 72/515 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHC 117
               +++   +E  + A      L+      G + D  KV   P W    +R    G + 
Sbjct: 32  FDADIVAAVLEEAGKFATDVLAPLNRVGDEHGIKLDAGKVTTAPGWPDAYKRWTEGGWNA 91

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
                +F       A  I AA   + +       + P +T++++ AL    +  +   + 
Sbjct: 92  VSGPEAFGGQGLPVA--INAACTEIWSASNVAFGLCPLLTASAIEALDAHGSDELKAIYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D+ A+ ++ +K +DG Y + G K F+
Sbjct: 150 EKLVSGEWTGT-------------MQLTEPQAGSDVGALRTRAEKQADGTYRIKGTKIFI 196

Query: 236 SSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D        +LA++         +  FLVP+ + +     G+ N +    +++K+
Sbjct: 197 TYGEHDMTDNIVHFVLARLPDAPAGTKGISLFLVPKFMVNADGSLGARNDIFASGVEHKL 256

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  ++ T  +   +     GFL+G+ N     +  M     L   +  V     +  +A+
Sbjct: 257 GMHASPTCTMTMGDHGGAIGFLIGEENQGMRCMFTMMNQARLGVGLEGVGVADRAYQQAL 316

Query: 337 HYARRRHVS---GGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------ 381
            YA+ R      G        +   P +KR +  +    AAA  + +  A + D      
Sbjct: 317 SYAQERKQGRAVGKKGDGSDAIFVHPDVKRMLMRMRAQTAAARTICYATAVAIDVSTRAR 376

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K R++ AA A ++ P+ K +   +   V    ++  GG G+IEE   A++YR++   +
Sbjct: 377 DPKVRADAAARAALLTPMAKGYSTDIGNEVAYLGVQVHGGMGFIEETGAAQYYRDARITA 436

Query: 442 ILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-------GSSGKKVITILRDSIS 492
           I  G+       L    L   G      L   L   +         +       LR+++ 
Sbjct: 437 IYEGTNGIQAIDLVTRKLAANGGAAVWALLDELSAVVKQVEASNDPAFGTTGAKLREALD 496

Query: 493 LCKEDKGLARFLTEKI------ALASSAAALYRAG 521
                   +++L E++      ALA +   L + G
Sbjct: 497 ALTRT---SKWLLERVTSAPNEALAGATPYLQQFG 528


>gi|228985439|ref|ZP_04145597.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228774293|gb|EEM22701.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 569

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 152/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    ++ GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKNPGL 455


>gi|317025737|ref|XP_001389698.2| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus
           niger CBS 513.88]
          Length = 438

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 141/384 (36%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E      A++ +    GL        +          I A       
Sbjct: 77  EQISPKVRDMDEAETMD--PAVVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVAIEELARV 134

Query: 145 QLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +  +      +  + W PK+               T       L+
Sbjct: 135 DPSVSVLVDVHNTLVNTSIMKYGDAQAKRTWLPKL--------------ATGTVGSFCLS 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  ++  S  F++ A ++   G   +   + 
Sbjct: 181 EPASGSDAFALKTKAEKTADGYKINGSKMWITNAMESGVFLVFANLDPSKGYKGITAFIV 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +    L+   N+     +  K  I  L+   
Sbjct: 241 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILNEGR 297

Query: 323 MSVSGMRVSLA-----EAIHY-ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA      A  Y    R   G ++ +   M+  +A    +IAAA AL +  
Sbjct: 298 IGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVYNA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 358 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRD 410

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 411 SKIGAIYEGTSNIQLQTIAKLLQK 434


>gi|293608478|ref|ZP_06690781.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829051|gb|EFF87413.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 383

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 135/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +E +    +     A  L   +      + + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P++   E             V     LTE   G+D A++ +   K  D  Y L+G
Sbjct: 106 KSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKTSAVKEGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+      G   +   + D    G+   +   K+G +   T +
Sbjct: 152 TKRFITNAPHAGVFTVMARTNTDIKGAGGISAFIVDSQTPGISLGKRDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +SV      L ++++YA  R  
Sbjct: 212 VIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   + +  +
Sbjct: 325 TEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIARNMIRAAS 383


>gi|260460334|ref|ZP_05808586.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033979|gb|EEW35238.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 589

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/530 (19%), Positives = 194/530 (36%), Gaps = 79/530 (14%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHDGLHC 117
           LGE ++     E  R A      L+      G   +   V   P W  L RR I  G + 
Sbjct: 31  LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLKDASVITPPGWKELYRRWIDGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                ++          + A  ++  A +  G   + ++ +   +    +  +   +  K
Sbjct: 91  LSGPEAYGGQALPTMLGVAALEMWNSAAMAFGIGPTLTMGAVEALDKHASEDLKAKYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F++ 
Sbjct: 151 LVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFITY 197

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+ L       G+ N +    L++K+G 
Sbjct: 198 GEHDFTDNIIHLVLARLPDAPAGTRGISLFLVPKFLVGDDGSLGARNDVFCSGLEHKLGI 257

Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            ++ T  + + +          G+L+G+ N     +  M     L   +  V+    +  
Sbjct: 258 HASPTCTMIYGDGFQGAKPGAIGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEAATQ 317

Query: 334 EAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +AI YA  R               ++  P ++R +  +      A A+S+  A++ D A+
Sbjct: 318 KAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAIDMAR 377

Query: 385 SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             S + A      A ++ P+ K +   +   V +  ++  GG G+IEE   A  YR++  
Sbjct: 378 VSSGDEAAHWRDRANLLTPLAKAFSTDVGVEVASLGLQVHGGMGFIEETGAAALYRDARI 437

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE-----------QDLGSSGK----- 481
             I  G+       L    L   G          L            Q  G +       
Sbjct: 438 APIYEGTNGIQAIDLVARKLPLGGGEHVHGFIGELAVVASAVRTSNLQGFGRTADALDAA 497

Query: 482 -----KVITILRDSISLCKEDKGLARF--LTEKIALASSAAALYRAGMND 524
                +    L++  +  + ++ LA        I+LA+  A L R  + D
Sbjct: 498 LDDLTQATRFLQELSADGRSEQALAGATPYLRLISLAAGGAFLARGALAD 547


>gi|293610792|ref|ZP_06693092.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827136|gb|EFF85501.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123637|gb|ADY83160.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 607

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 176/459 (38%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVTTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++S  M  +    T    + + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y ++G K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPQADGSYKITGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFM 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAI 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                ++ +  A   D   +A +R ++AA+           PI K +  ++        M
Sbjct: 357 AEGGRSMIYYAAQIADKMTDALARGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI+E  + +  R++   ++  G+     LD++    LL     +  +  + + 
Sbjct: 417 QVYGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|163940124|ref|YP_001645008.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163862321|gb|ABY43380.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 569

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEQHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      DG         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSRFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEDAEVEIDVANVERNHRYILLAKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|112983006|ref|NP_001037672.1| acyl-coenzyme A dehydrogenase [Bombyx mori]
 gi|103058047|gb|ABF71566.1| acyl-coenzyme A dehydrogenase [Bombyx mori]
          Length = 422

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 128/354 (36%), Gaps = 16/354 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGHLMSPSVTSASMVALMTTPR 169
           I DG+   ++D     +     +         +M  +E    + P+V +   +       
Sbjct: 77  IDDGIRQMLFDNGVMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 136

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +           E           T  A    LTE   G+D  A+ +  +K  +      
Sbjct: 137 LFMK-----LGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISG 191

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +S ++  F+++   +   G   +   + +    GL   + +NK+G R++ T  +
Sbjct: 192 SKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGLSVAKPENKLGIRASGTCMV 251

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N        LG+                +  A   +   +  +   I Y   R   G
Sbjct: 252 HFDNVKVHESSILGEYGKGYKYAAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFG 311

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +   +   IA +   + AA  L++  A   +      +EAA A       KY+  +
Sbjct: 312 KKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMA-------KYFASE 364

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A  + ++ ++ +GG G+  +    + YR++   +I  G+ N  +  +  LLE+
Sbjct: 365 IAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLER 418


>gi|71907972|ref|YP_285559.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71847593|gb|AAZ47089.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 378

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 145/398 (36%), Gaps = 33/398 (8%)

Query: 68  CTAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              Q+LAR  A+     L A        DKV   P   A+ ++++  GL   +    +  
Sbjct: 10  RMIQDLAREFADREIAPLAAQ----ADVDKV--FPL--AVQQKALELGLLNIVLPTEYGG 61

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                         +  A L  G  +  +  +A  + L       + +  ++ + E+   
Sbjct: 62  AGLGCLEVALITEQFCRACLGIGTTLCINALAAEPIVLAGNEAQKRKYFSRLAAGEF--- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                          LTE   G+D AAI +  ++++ G        W  ++ ++   ++ 
Sbjct: 119 -----------ASFALTEPAAGSDSAAIRTSAKRVAGGYELTGSKIWISNASLASFMVVF 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+ +   G   +   + +    GL       K+G R+  T E+ F   F      L    
Sbjct: 168 AKTDPAAGHKGISAFIVERESAGLSVGEPLGKLGQRAAPTCEVFFDQVFVPEENRLGAEG 227

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    M+         A   +   +  + E++ YA  R   G  LID  V+   +AD+ 
Sbjct: 228 EGFSIAMRTFDQSRPMVAAFGLGLTQRCIDESLAYACERQSMGKRLIDHQVIAHRLADMR 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + + A+  L+++ A   D+    + +       A I K +    A     EA++  GG G
Sbjct: 288 IRLEASRLLTYQSAWLADQGLRNTSQ-------ASIAKAFTSDAAMWAATEAIQIFGGMG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y  E  + + +R++    I  G+       +   +E+ 
Sbjct: 341 YSTEYPVEKLFRDAKVLQIYEGTSEIQRNIIARDMERA 378


>gi|17986972|ref|NP_539606.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|62290217|ref|YP_222010.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82700138|ref|YP_414712.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189024452|ref|YP_001935220.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus S19]
 gi|237815725|ref|ZP_04594722.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254689522|ref|ZP_05152776.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           6 str. 870]
 gi|254697661|ref|ZP_05159489.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254730551|ref|ZP_05189129.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           4 str. 292]
 gi|256044953|ref|ZP_05447856.1| Acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256113866|ref|ZP_05454659.1| Acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
 gi|256257771|ref|ZP_05463307.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           9 str. C68]
 gi|260546761|ref|ZP_05822500.1| acyl-COA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260565447|ref|ZP_05835931.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260755045|ref|ZP_05867393.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260758261|ref|ZP_05870609.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260762088|ref|ZP_05874431.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260884056|ref|ZP_05895670.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|265991379|ref|ZP_06103936.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265995216|ref|ZP_06107773.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|297248608|ref|ZP_06932326.1| butyryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|17982620|gb|AAL51870.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|62196349|gb|AAX74649.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82616239|emb|CAJ11289.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189020024|gb|ACD72746.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus S19]
 gi|237789023|gb|EEP63234.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260095811|gb|EEW79688.1| acyl-COA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260151515|gb|EEW86609.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260668579|gb|EEX55519.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260672520|gb|EEX59341.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260675153|gb|EEX61974.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260873584|gb|EEX80653.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|262766329|gb|EEZ12118.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263002163|gb|EEZ14738.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|297175777|gb|EFH35124.1| butyryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 144/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMPGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|148253980|ref|YP_001238565.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146406153|gb|ABQ34659.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 592

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/524 (19%), Positives = 199/524 (37%), Gaps = 71/524 (13%)

Query: 46  LIANFPSVVHKELEL--LGEY---VLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           L  N  + +   +E    G++   + +   +E  + A      L+      G +    KV
Sbjct: 12  LALNHGAGLKAAVEAGHYGDFDPDITAAVLEEAGKFATDVLAPLNKVGDRNGVKLADKKV 71

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P W    +R    G +      +        A  I AA   + +       + P +T
Sbjct: 72  TTAPGWPDAYKRWTEAGWNAVSGPETHGGQGLPLA--INAACTEIWSAANVAFGLCPLLT 129

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
            +++ AL    +  +   +  K+ S E+  T             + LTE + G+D+ A+ 
Sbjct: 130 LSAIEALDAHGSQELKDIYLGKLISGEWTGT-------------MQLTEPQAGSDVGALR 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           ++ ++  DG Y ++G K F++    D        +LA++         +  FL+P+ L +
Sbjct: 177 TRAERAPDGSYRITGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVN 236

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                   N +    +++K+G  ++ T  +   +     G+L+G  N     +  M    
Sbjct: 237 KDGSLGARNDIYPSGIEHKLGMHASPTCTMTMGDHGGAIGYLIGQENAGMRCMFTMMNQA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIA 367
            L   +  V     +  +A+ YA+ R               +I  P +KR +  +    A
Sbjct: 297 RLGVGLEGVGVADRAYQQALAYAQDRKQGRAVGSKGSGSDAIIAHPDVKRMLMQMRSLTA 356

Query: 368 AATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A+ ++ +  A + D      +   R+E AA   ++ PI K +   +   V    ++  GG
Sbjct: 357 ASRSICYATAVALDVAVRAKDPAVRAEAAARGALLTPIAKAFSTDIGNEVAYLGVQIHGG 416

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL------- 472
            G+IEE   A+HYR++   +I  G+       L    L   G     +L   L       
Sbjct: 417 MGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGASVFKLLDELTDIVRRV 476

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
           E     +       LR+++S  +     +R+L EK+  A + A 
Sbjct: 477 EASNDPAFGTTGAKLREALSALER---SSRWLLEKLGTAPNDAL 517


>gi|306841672|ref|ZP_07474359.1| acyl-COA dehydrogenase [Brucella sp. BO2]
 gi|306288202|gb|EFM59586.1| acyl-COA dehydrogenase [Brucella sp. BO2]
          Length = 597

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEASPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCEANRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|317497765|ref|ZP_07956078.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316894954|gb|EFV17123.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 134/362 (37%), Gaps = 28/362 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMV 162
              ++    G     + + +          + A      + + +   + +  S+ S +++
Sbjct: 40  EAYKKMGEMGFVGLPFPKEYGGQGGDYLSYVLALEEISKINSSVGIAYSVCTSLYSGALI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P++ S                     LTE   G+D A   +      
Sbjct: 100 -NDGNEEQKKKYLPEVLSG-------------KKMGSFCLTEPDAGSDAAGCKTTAIWNG 145

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y L+G K F+++  ++D ++++A     +    +   + +    G+   ++++K G 
Sbjct: 146 KE-YILNGLKCFITNGPLADYYMVVALTNPELKTKGLTAFIVEREWEGVSIGKIEDKCGI 204

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           R     E+ F N        L     G    MK L    +  A   +   + +   A +Y
Sbjct: 205 RCAQVSEVIFDNVRVPKENMLGEEGKGFAVAMKDLDGGRIGVAAQGLGIAKGAYDIAFNY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  L     +   +A++  +I  A  + ++ A    E KS S  AA A+++  
Sbjct: 265 LKEREQFGKPLYKNQYLAFKMAELETEIEMAQYMLYKAATDKQEGKSYSVPAAKAKMV-- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                C   A  V  EA++ +GG+GY++E  + R  R++    I  G+     L +   +
Sbjct: 323 -----CTDAAMHVATEAVQMLGGNGYMKEYHVERMLRDAKITQIYEGTNEIQKLVISGNM 377

Query: 459 EK 460
            +
Sbjct: 378 FR 379


>gi|194748953|ref|XP_001956905.1| GF10158 [Drosophila ananassae]
 gi|190624187|gb|EDV39711.1| GF10158 [Drosophila ananassae]
          Length = 419

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 135/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK++         ++    G      +  F         H I        A   
Sbjct: 59  PLAKEIDKLDNFKEMRPFWKKLGDLGFLGITAEPDFGGTGGSYLDHCIIMEEFSRAAGGV 118

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    TP   + + PK+ S E+               GL ++E   
Sbjct: 119 ALSYGAHSNLCINQLTKNGTPEQKEKYLPKLCSGEH-------------VGGLAMSEPGA 165

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D+ ++  + ++  D         W  +   +D  I+ A+  G        +   + + 
Sbjct: 166 GSDVVSMKLRAERKGDYYVLNGSKFWITNGSDADTLIVYAKTGGSDVPNKHSITAFIVET 225

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    +  +K+G R ++T EL F +       +LG  N     +        L  A 
Sbjct: 226 AWEGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENKGVYVLMSGLDFERLVLAA 285

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D 
Sbjct: 286 GPVGLMQAACDVAFDYAHQRKQMNQLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDA 345

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++             +  + A  V  +A++ +GG+GYI E    R  R++    I
Sbjct: 346 GARSSKD-------CAGVILYTAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEI 398

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 399 GAGTSEIRRWLIGRQLNQ 416


>gi|167581071|ref|ZP_02373945.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           TXDOH]
          Length = 596

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/478 (20%), Positives = 183/478 (38%), Gaps = 63/478 (13%)

Query: 63  EYVLSCTAQE-LARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDGL 115
           E     TAQ  L   A +    L      G+R         V   P +    R+ +  G 
Sbjct: 30  EDAGFDTAQAVLDESAKFCGEVLAPLNVEGDRNPSSWKDGAVTATPGFKEAFRQFVEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173
                   ++     +   I    + ++        + P +T  ++ AL+T  T      
Sbjct: 90  QGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDGAIEALLTAGTEAQKSR 147

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + G+D+A + S+ +   DG Y + G K 
Sbjct: 148 YVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQPDGSYKVFGTKI 194

Query: 234 FLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L +     G+ N +    +++
Sbjct: 195 FITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNDDGSLGARNDVHCVSIEH 254

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T  L++ +     G+L+G+ N     +  M         +  +     +  +
Sbjct: 255 KLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVAERAYQK 314

Query: 335 AIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           A  +A+ R  S            +I  P ++R +A +      A ALS+  A   D A  
Sbjct: 315 AAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARALSYVAAAHSDHAHR 374

Query: 386 RSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++E   A+  A      P+ K W  +M   V +  ++  GG G+IEE   A++YR++  
Sbjct: 375 AADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMGFIEETGAAQYYRDARI 434

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGSSGKKVITILRDSIS 492
            +I  G+       L     +  G  + + L   + Q    LG+        ++  + 
Sbjct: 435 LAIYEGTTAIQANDLVGRKTVRDGGAVAKALVGEIRQTAEALGAHDGPAFAAMKAQLE 492


>gi|53720107|ref|YP_109093.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126442296|ref|YP_001059884.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|126453376|ref|YP_001067171.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|134277599|ref|ZP_01764314.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|167720647|ref|ZP_02403883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167816838|ref|ZP_02448518.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167846744|ref|ZP_02472252.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167895330|ref|ZP_02482732.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167911965|ref|ZP_02499056.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167919957|ref|ZP_02507048.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|242314186|ref|ZP_04813202.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254195643|ref|ZP_04902070.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254295639|ref|ZP_04963097.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|52210521|emb|CAH36504.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126221789|gb|ABN85295.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|126227018|gb|ABN90558.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|134251249|gb|EBA51328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|157805512|gb|EDO82682.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|169652389|gb|EDS85082.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|242137425|gb|EES23827.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 596

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L        G  + + L   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGA 478

Query: 479 SGKKVITILRDSIS 492
                 T ++  + 
Sbjct: 479 HDGPAFTAMKTQLE 492


>gi|212639345|ref|YP_002315865.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560825|gb|ACJ33880.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 380

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P      R+   +G  C   D ++        + +             
Sbjct: 26  PFYAEWEKQGIIP--RDFWRKMGANGFLCPWVDETYGGFGADFGYSVVINEELEKVGSSL 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    K W PK  S E             +   + +TE   G
Sbjct: 84  VGIGLHNDIVVPYIASYGTEEQKKKWLPKCVSGE-------------LITAIAMTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG--RVGCFLVPRLLEDG 265
           +D+A I +   K  D  Y ++G K F+++ + +D  +++ +           +  L+ + 
Sbjct: 131 SDLAGIQTTAVKQGDH-YIVNGQKTFITNGIHADLVLVVCKTNPSANPPHKGISLLVVER 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL FS+       LLG+       + +      L  AI
Sbjct: 190 ETTGFTRGRKLEKVGLHAQDTAELFFSDAKVPVENLLGEEGKGFYYLMEKLQQERLIVAI 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V       Y + R   G  +     ++  +A++A +IA   A    +      
Sbjct: 250 AAQTAAEVMFDLTKRYVKDRTAFGKTISQFQTVQFRLAEMATEIALGRAFLDDVIEQHIA 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K              + K+W  +MA  + +E M+  GG GY+EE  IAR YR+ P ++I
Sbjct: 310 GKD-------VVANVSMAKWWMTEMAKRIASEGMQLHGGYGYMEEYEIARRYRDIPVSAI 362

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + +   L
Sbjct: 363 YAGTNEVMKMIIAKHL 378


>gi|158424457|ref|YP_001525749.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331346|dbj|BAF88831.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 390

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 138/377 (36%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P  +  D+    P    L       GL     +  +         H I    +   +
Sbjct: 31  RIAPRADEIDRSNQFP--RDLWPELGALGLLGLTVEEEYGGSGLGYLEHVIAMEEISRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    +    + + PK+ S E+                L ++E
Sbjct: 89  ASVGLSYGAHSNLCVNQIRRNGSQEQKQRYLPKLISGEH-------------VGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++ ++ +K  D         W  + P+++  ++ A+ +   G   +   L +
Sbjct: 136 PGAGSDVVSMRTRAEKKGDRYILNGSKMWITNGPIAETLVVYAKTDPAAGARGITAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L      V  +   +  + A+++
Sbjct: 196 KGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGQVGRGVNVLMSGLDYERAVLA 255

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  +   I Y   R   G  +    +M+  IAD+ + + +  A  + +A + D
Sbjct: 256 GGPIGIMQACMDVVIPYVHERKQFGQPIGTFQLMQGKIADMYVAMNSVKAYVYAVAKACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +  E+AA A ++A        + A  +  EA++ +GG+GYI +    R  R++    
Sbjct: 316 RGLTTREDAAGAILIAA-------EKATWMALEAIQTLGGNGYINDYPTGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|281425458|ref|ZP_06256371.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302]
 gi|281400451|gb|EFB31282.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302]
          Length = 576

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/431 (21%), Positives = 163/431 (37%), Gaps = 46/431 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R ++ +         A+ L   A     ++ S        +  
Sbjct: 93  ENIEATRQAGLWGISMPRRYDGLNIPNTVFSMASELIAAADAGFQNVWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K + P+I + E               + + LTE   G+D+  +  +    +DG
Sbjct: 152 FGTEEQRKKYIPRISAGE--------------TMSMDLTEPDAGSDLQRVMLKATLDADG 197

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G   
Sbjct: 198 TWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHG 257

Query: 284 NATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           + T EL + N    L GD  +     V  +     L  A  SV   + +  EA+ YA+ R
Sbjct: 258 SPTCELVYKNAKCELCGDRKLGLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKER 317

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA- 391
              G  +I  P +   ++ +   + A  ++ +  A   D          E K   EE   
Sbjct: 318 AQFGKKIITFPAVYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKE 377

Query: 392 ------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A    PI K    + A     +A+   GGSG+I E    R YR++   SI  G
Sbjct: 378 MKQYNRLADAFTPIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK- 498
           +    V+  +  +  GT L       E   S   Q L     K++ +  ++++   +D+ 
Sbjct: 438 TTQLQVVAAVRYITNGTYLGIMKEMLEAPVSDNMQPLKMRIAKLVALYEEALNKVNDDES 497

Query: 499 -----GLARFL 504
                 LAR L
Sbjct: 498 QDEHDFLARRL 508


>gi|237813278|ref|YP_002897729.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|237505187|gb|ACQ97505.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 596

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L        G  + + L   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGA 478

Query: 479 SGKKVITILRDSIS 492
                 T ++  + 
Sbjct: 479 HDGPAFTAMKTQLE 492


>gi|319948804|ref|ZP_08022920.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319437511|gb|EFV92515.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 388

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/360 (20%), Positives = 125/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R+   GL C+     +        H+             +      S   A  + 
Sbjct: 43  RELWTRAGELGLLCASIPEEYGGGGGNFFHEAILIEEQARIGDSSWGAALHSGIVAHYLL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    ++W PK+ S E             V   + +TE   G+D+  I ++  +  D
Sbjct: 103 HYGTEEQKREWLPKMASGE-------------VVTAIAMTEPGTGSDLQGIKTKAVREGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++      +++A +         V  ++   S  G    RL  KIG +
Sbjct: 150 D-YVINGAKTFITNGYHADMVLVACKTSPDQAAAGVSLVIVPTSSEGFRRGRLLGKIGLK 208

Query: 283 SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              T EL F +        L      G V+ M  L    L  A+   + M + L     Y
Sbjct: 209 GQDTCELFFDDVRVPSSNLLGTEEGQGFVQLMMQLPQERLIVAVSCAASMDLMLDLTHEY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +      K  +A++A +     A         DE      ++      A 
Sbjct: 269 TLTREAFGKPIFGFQNTKFKLAEVATEARVTRAF-------IDECLDLHVKSELDIPTAA 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + KYW  + A  V    ++  GG GY+EE  IAR + +   + I  G+   M   +   L
Sbjct: 322 MAKYWSSERAQQVADTCLQLHGGYGYMEEYPIARAWTDLRVSQIYAGTTEIMKEIIARSL 381


>gi|183981284|ref|YP_001849575.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium marinum M]
 gi|183174610|gb|ACC39720.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium marinum M]
          Length = 389

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 119/375 (31%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDENSRFP--QEALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P +                +      L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSDDLKKQVLPSL-------------ADGAAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAGAMRTRAKADGDDWILNGTKCWITNGGKSSWYTVMAVTDPEKGANGISAFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G      + K+G + + T EL F N       ++G+                      +V
Sbjct: 201 GFVVGPKERKLGIKGSPTTELYFENCRVPGDRMIGEPGTGFKTALATLDHTRPTIGAQAV 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  AI Y + R   G  + D   ++  +AD+A+ + +A  + +  A   +  +S
Sbjct: 261 GIAQGALDAAIAYTKDRKQFGKSISDFQAVQFMLADMAMKVESARLMVYSAAARAERGES 320

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     ++  +K     +A  V  +A++  GG+GY  +  + R  R++    I  G
Sbjct: 321 N------LGFISAASKCLASDVAMEVTTDAVQLFGGAGYTVDFPVERMMRDAKITQIYEG 374

Query: 446 SGNAMVLDVLNLLEK 460
           +     + +   L +
Sbjct: 375 TNQIQRVVMSRALLR 389


>gi|23500529|ref|NP_699969.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|148557925|ref|YP_001257741.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|161620854|ref|YP_001594740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|163844921|ref|YP_001622576.1| hypothetical protein BSUIS_B0787 [Brucella suis ATCC 23445]
 gi|254700009|ref|ZP_05161837.1| hypothetical protein Bsuib55_03987 [Brucella suis bv. 5 str. 513]
 gi|254705725|ref|ZP_05167553.1| hypothetical protein BpinM_01630 [Brucella pinnipedialis
           M163/99/10]
 gi|254710958|ref|ZP_05172769.1| hypothetical protein BpinB_11992 [Brucella pinnipedialis B2/94]
 gi|254712570|ref|ZP_05174381.1| hypothetical protein BcetM6_04182 [Brucella ceti M644/93/1]
 gi|254715642|ref|ZP_05177453.1| hypothetical protein BcetM_04202 [Brucella ceti M13/05/1]
 gi|256015560|ref|YP_003105569.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029340|ref|ZP_05442954.1| hypothetical protein BpinM2_01550 [Brucella pinnipedialis
           M292/94/1]
 gi|256059026|ref|ZP_05449236.1| hypothetical protein Bneo5_01540 [Brucella neotomae 5K33]
 gi|256157532|ref|ZP_05455450.1| hypothetical protein BcetM4_01585 [Brucella ceti M490/95/1]
 gi|256253493|ref|ZP_05459029.1| hypothetical protein BcetB_04172 [Brucella ceti B1/94]
 gi|260167572|ref|ZP_05754383.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|260567940|ref|ZP_05838409.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261217391|ref|ZP_05931672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261220620|ref|ZP_05934901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261313146|ref|ZP_05952343.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318538|ref|ZP_05957735.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320264|ref|ZP_05959461.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261322972|ref|ZP_05962169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261750492|ref|ZP_05994201.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261756992|ref|ZP_06000701.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986339|ref|ZP_06098896.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265996033|ref|ZP_06108590.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|23464162|gb|AAN33974.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|148369210|gb|ABQ62082.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|161337665|gb|ABX63969.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|163675644|gb|ABY39754.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255998220|gb|ACU49907.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260154605|gb|EEW89686.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260919204|gb|EEX85857.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260922480|gb|EEX89048.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261292954|gb|EEX96450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297761|gb|EEY01258.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261298952|gb|EEY02449.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261302172|gb|EEY05669.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736976|gb|EEY24972.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740245|gb|EEY28171.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|262550330|gb|EEZ06491.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264658536|gb|EEZ28797.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 597

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|152980951|ref|YP_001354781.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium
           sp. Marseille]
 gi|151281028|gb|ABR89438.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium
           sp. Marseille]
          Length = 596

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/464 (20%), Positives = 174/464 (37%), Gaps = 68/464 (14%)

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G + D    +V     + A   + +  G      D  +          ++ +   ++
Sbjct: 62  DREGCKLDTSTHEVTPPKGFKAAYEQYVAAGWPSLTCDPEYGGQGLP--MVLQNSFYEML 119

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +   L    T +    + PK+ S E+  T             + 
Sbjct: 120 NSSNQAWTMYPGLSHGAYECLYAHGTEQQKALYLPKLVSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------E 250
           LTE + GTD+  + S+ +  +DG Y ++G K F+S+   D       ++LA++       
Sbjct: 167 LTEAQCGTDLGLLRSKAEPQADGSYKITGSKIFISAGEHDMAANILHLVLARLPDAPEGT 226

Query: 251 GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L D     G+ N +    L+ K+G   NAT ++      G+L+G+ N  
Sbjct: 227 KGISLFIVPKFLPDAAGKLGARNPIFCGALEEKMGIHGNATCQMNIDGATGWLIGEPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  M     L   + S+    V+   A+ YA+ R                  +I  P
Sbjct: 287 LNAMFVMMNAARLGVGMQSLGLTEVAYQNALVYAKDRLQMRSLTGPKATDKPADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKM 407
            ++R +           A S  +A   D+  +  +EA  A        + PI K +    
Sbjct: 347 DVRRMLLTAKAYAEGGRAFSSYVALQIDKELNHPDEAVRAEAVDEVALLTPIIKAFLTDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                +EAM+  GG G+I E  + ++ R+S  N I  G+     LD+L            
Sbjct: 407 GWISTSEAMQVYGGHGFISEWGMEQYVRDSRINMIYEGTNTIQSLDLLG----------- 455

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
               +  D G+  +K    ++  I     D+ ++ F+T    LA
Sbjct: 456 --RKILLDNGAKLRKFGAKIQAFIEENGTDEAMSEFITPLADLA 497


>gi|103487022|ref|YP_616583.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977099|gb|ABF53250.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 600

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/445 (19%), Positives = 157/445 (35%), Gaps = 53/445 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                V     +    +     G         F                Y MA  +A  +
Sbjct: 68  HDDGSVTTPKGFKEAYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPV-EEYRMAANQAFAM 126

Query: 152 MSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                 +A   + +  +      + PK+ S E+  T             + LTE   GTD
Sbjct: 127 YPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGGT-------------MNLTEPHCGTD 173

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVP 259
           +  I ++     DG Y ++G K F+SS   D       ++LA+          +  F+VP
Sbjct: 174 LGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVP 233

Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + L       G  N L    +++K+G  +N+T  + +    G+++G+ N     +  M  
Sbjct: 234 KFLVKEDGSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMN 293

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADI 362
              L   I  +    ++   A+ YA+ R                  L   P ++R + D 
Sbjct: 294 AARLGVGIQGLGQADIAFQNAVAYAQDRRQGRALTGPKDPQEKADPLFVHPDVRRMLMDA 353

Query: 363 ALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              +    AL    A   D A      + R        ++ P+ K +       V   A 
Sbjct: 354 KATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGYGTDKGYEVATNAQ 413

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
           +  GG GYIEE  ++++ R++    I  G+     +D++   L + G    + LF+ ++ 
Sbjct: 414 QVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDA 473

Query: 475 DLGSSGKKVITILRDSISLCKEDKG 499
           +  ++  K    L D     ++  G
Sbjct: 474 ECAAA--KDKPALADFAGRLEKANG 496


>gi|257483065|ref|ZP_05637106.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289624776|ref|ZP_06457730.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650647|ref|ZP_06481990.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298489178|ref|ZP_07007197.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156260|gb|EFH97361.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320326436|gb|EFW82489.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331592|gb|EFW87530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872316|gb|EGH06465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 601

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQGNEGNEAVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|88859254|ref|ZP_01133894.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2]
 gi|88818271|gb|EAR28086.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2]
          Length = 382

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 139/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E+ D     P  + L       GL        F         H I    +   +   
Sbjct: 26  PLAEKTDHDNAFP--NQLWPILGEMGLLGLTVSEEFGGAGMGYLEHVIAMEEISRASASI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 84  GLSYGAHSNLCVNQIFRNGSQAQKEKYLPKLVSGEH-------------IGALAMSEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 131 GSDVVSMKLKAEKRGDKYILNGNKMWITNGPDAHTYVIYAKTDLNAGAKGITAFIVERDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G    +  +K+G R + T EL F +       + N+  G    +K+L+  LD       
Sbjct: 191 PGFTQAQKLDKLGMRGSNTCELVFIDCEVP---EENILGGLNNGVKVLMSGLDYERVVLS 247

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+  M+  +   + Y   R      +    +++  IAD+   + AA +  + +A S D
Sbjct: 248 GGSLGIMQACMDIVVPYIHERKQFDSPIGQFQLIQGKIADMYTQMNAARSYVYTVAKSCD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA A         +  ++A  +  +A++ +GG+GYI E +  R  R++    
Sbjct: 308 RGETTRKDAAGA-------ILYAAELATKMALDAIQILGGNGYINEYATGRLLRDAKLYE 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 361 IGAGTSEIRRMLIGREL 377


>gi|148360485|ref|YP_001251692.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila
           str. Corby]
 gi|296106448|ref|YP_003618148.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282258|gb|ABQ56346.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila str. Corby]
 gi|295648349|gb|ADG24196.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|307609660|emb|CBW99167.1| hypothetical protein LPW_09511 [Legionella pneumophila 130b]
          Length = 384

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 141/373 (37%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P    +LR +   G+   +           +              +  
Sbjct: 26  PMADFWDEQGYFPI--EILREAAQLGMAGMVVREDIGGAQLSRLDAALIFEQLATGCIPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     AS+V    +  + K W PK+ S E             V     LTE   G
Sbjct: 84  SAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLTEPESG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K     Y L+G K F+S   +SD ++ + +  G      +  LL + + 
Sbjct: 131 SDAASLKTRAVKEG-EYYVLNGAKAFISGGSVSDVYLCMVRT-GDESHHGISCLLIEKNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + +L+ K+G R+  T  L F N    +   +G+  +      +      ++ A  S
Sbjct: 189 PGLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIALNALNGGRVNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G    L  +  Y   R   G  L     ++   AD+  D  AA  + +R A + D   
Sbjct: 249 LGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAARLMVYRAAAAMDNDD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A +   + K     +A  +  +AM+  GG GY+ +  I R +R+   + IL 
Sbjct: 309 PN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQIERIFRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNL 457
           G+   M   +   
Sbjct: 363 GTNEIMREIIAKA 375


>gi|306843342|ref|ZP_07475946.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO2]
 gi|306286458|gb|EFM58054.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO2]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 143/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +       V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTGFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|253559432|gb|ACT32396.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens]
          Length = 592

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/525 (17%), Positives = 185/525 (35%), Gaps = 62/525 (11%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+         +    L   L A   +V  + +E + E     T++ +A ++  
Sbjct: 10  DMRFVLNEV--------FEVAKLWAQLPALADTVDAETVEAILEEAGKVTSKSIAPLSRA 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              +   +  G      V     +    +     G      D  +  +   +A   +   
Sbjct: 62  ADEEGCHWADGA-----VSTPAGFPQAYKTYAEGGWVGVGGDPVYGGMGMPKAVSAQVEE 116

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +   A L  G     +  +   +    +  +   + P +++  +             A  
Sbjct: 117 MVNSASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVW-------------AGS 163

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++     
Sbjct: 164 MCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPA 223

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  FLVP+ + +     G+ N      +++K+G +++AT  + F    G+L+G+ N
Sbjct: 224 GPKGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPN 283

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  M     L   I  ++    S   A+ YAR R  S               +I 
Sbjct: 284 KGLAAMFTMMNYERLGVGIQGLASGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIV 343

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCC 405
            P ++R +  +        A S  +A   D AK      +R        ++ P+ K +  
Sbjct: 344 HPDVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPTTRKRAEDLVALLTPVAKAFLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            +         +  GG GYI E    +  R+     I  G+     LD++   ++  G  
Sbjct: 404 DLGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGA 463

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            ++     +     ++   +   ++   S       L  +L ++ 
Sbjct: 464 FYKLFADEIRHFTATASSDLAEFIKPLNSAVDTLDELTDWLLDRA 508


>gi|311106651|ref|YP_003979504.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761340|gb|ADP16789.1| acyl-CoA dehydrogenase 2 [Achromobacter xylosoxidans A8]
          Length = 375

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 148/399 (37%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +L+     +  MA           P  E WD+   +PA    +      G    +   ++
Sbjct: 2   LLTEEQLSVQEMARRFA--QERLAPNSEAWDRDHAYPA--DAIAEMAQLGFFGMLVPEAW 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
           +           A             +MS   + A M  L   T    + +   + + E+
Sbjct: 58  DGNDSGYIAYAVALEEIAAGNGACSTIMSVHNSVACMPILKFGTDAQKEQFLRPLATGEH 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-A 242
                          G  LTE + G+D +++ ++ ++  D  Y L+G K F++S  S   
Sbjct: 118 -------------IGGFALTEPQAGSDASSLHTRARRDGDD-YILNGAKQFITSGRSGQV 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            I+ A  +   G   +   +      G    R+++K+G  ++ T ++ F +        L
Sbjct: 164 VIVFAVTDPEAGKRGISAFIVPTDTPGYKVLRVEDKLGQHASDTCQIAFEDMRIPAAYRL 223

Query: 303 N-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    +  L    +  A  SV   R +   A  YAR R   G  +++   +   +
Sbjct: 224 GAEGEGYKIALSNLEGGRIGIASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVAFRL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  I AA  +    A   +  +        A   A + K +  +MA  V + A++ +
Sbjct: 284 ADMATQIHAARQMVLHAAALREAGRP-------ALTEASMAKLFASEMAEKVCSAAIQTL 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+++  + R YR+     I  G+ +   L +   L
Sbjct: 337 GGYGYLKDFPVERIYRDVRVCQIYEGTSDIQRLVIARGL 375


>gi|260555429|ref|ZP_05827650.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411971|gb|EEX05268.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 383

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 135/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +E +    +     A  L   +      + + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P++   E             V     LTE   G+D A++ +   K  D  Y L+G
Sbjct: 106 KSFFLPRLARGE-------------VISSFCLTEPDAGSDAASLKTSAVKDGD-FYVLNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+      G   +   + D    G+   +   K+G +   T +
Sbjct: 152 TKRFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGKRDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +SV      L ++++YA  R  
Sbjct: 212 VIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   + +  +
Sbjct: 325 TEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQVIIARNMIRAAS 383


>gi|296387250|ref|ZP_06876749.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 593

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/578 (15%), Positives = 189/578 (32%), Gaps = 67/578 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L   I  +    +S   A+ YAR R  S               +I  P 
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVASDKAADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +        A          LA   ++ + RS+  A   ++ P+ K +     
Sbjct: 347 VRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                   +  GG GYI E    +  R+     I  G+     LD++   ++  G     
Sbjct: 407 LESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLS 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGM 522
                +      +  ++   +   ++       L + +  +         +A+  Y    
Sbjct: 467 IFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLF 526

Query: 523 NDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
              A  +L  R                +        Y 
Sbjct: 527 GYTAYAYLWARMAAAALRQREADPAFHDGKLATARFYF 564


>gi|269125411|ref|YP_003298781.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310369|gb|ACY96743.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 380

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 142/409 (34%), Gaps = 44/409 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +E E   + V S   +E+A       P    +       D +     W A    +   GL
Sbjct: 8   EEHEAFRDMVRSFIEKEVA-------PYHEQW-----EKDGIVSRDVWLA----AGRQGL 51

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                   +                 L        G  +   +  + ++ L       + 
Sbjct: 52  LGIEVPEEYGGGGNPDYRYYVILNEELAKVGAHGPGFAVHNDINGSYLLKLC-NEEQKRR 110

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P   S E             +   + +TE   G+D+  I +   K  D  Y L+G K 
Sbjct: 111 WLPGYCSGE-------------IITAIAMTEPAAGSDLQGIKTTAIKDGDH-YVLNGSKT 156

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+ + +D  I+ A+ +   G   V  L+ +    G    R   K+G  +  T EL F 
Sbjct: 157 FISNGILADLVIVAAKTDPSAGARGVSLLVVERGMEGFTRGRNLEKVGMHAQDTAELFFD 216

Query: 293 NTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N        L     G +  M+ L    L     +++G   S  + + Y + R   G  +
Sbjct: 217 NVRVPKENLLGEEGMGFIYLMQNLARERLSIGTSALAGAEASFEQTLEYCKTREAFGRPI 276

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +A++  ++  A A + +        +  +EEAA         KYW  ++  
Sbjct: 277 GKFQHNRFVLAEMKTELTVARAFTEQCILKQVNGELTAEEAAML-------KYWNTELIK 329

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V+   ++  GG GY+ E  I + Y++    +I  G+   M   +   L
Sbjct: 330 RVVDRCVQLHGGYGYMLEYPIGKAYQDVRIQTIFGGTTEIMKEIIGRSL 378


>gi|300313969|ref|YP_003778061.1| isovaleryl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300076754|gb|ADJ66153.1| isovaleryl-CoA dehydrogenase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 394

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 135/374 (36%), Gaps = 20/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L ++    G+        +        AH I    +   +   
Sbjct: 32  PRAAEIDRSDQFPM--DLWKKLGDLGVLGITVSEEYGGAGLGYLAHIIAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + P++ S ++                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIKRNGNEEQKRKYLPRLISGDF-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 137 GSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDLEAGARGMTAFLVEKGY 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + +++S   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNVLMSGLDFERSVLSGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +M+  +AD+   + A  A  + +  + D A 
Sbjct: 257 LGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMACKAYVYAVGQACDRAD 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S  +  A  R  A     +  + A  +  EA++ +GG+GYI E  + R +R++    I  
Sbjct: 317 SADKVRAL-RKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYPVGRLWRDAKLYEIGA 375

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 376 GTSEIRRMLIGREL 389


>gi|308475085|ref|XP_003099762.1| hypothetical protein CRE_23613 [Caenorhabditis remanei]
 gi|308266417|gb|EFP10370.1| hypothetical protein CRE_23613 [Caenorhabditis remanei]
          Length = 572

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 132/377 (35%), Gaps = 54/377 (14%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---------S 160
           +  +GL        +            +     M  +E      PSV++          S
Sbjct: 128 AFENGLMGVHVPEEYGGSG--------STFFDAMIVIEELAKTDPSVSAMVGIHNTLPVS 179

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    T      + P + S                     ++E   G+D  A+ +  +K
Sbjct: 180 MIVEHGTEEQKHKYLPLLCS--------------QSLASFCISESGAGSDAFALKTVAKK 225

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W   S  +  F++ A  +       +   + +    GL   R ++K+G
Sbjct: 226 DGDDFLISGSKMWITDSGEAQVFVVFANADPSQKYKGITCFIVERGVEGLTVDREEDKLG 285

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI--- 336
            R+++T ++ F N          +     +  K  I  L++  + +    + LA+     
Sbjct: 286 IRASSTCQVHFDNVRVHKSA---ILGEYGKAYKYAIECLNAGRIGIGAQMLGLAQGCFDQ 342

Query: 337 --HYARRRHVSGGILIDQ-------PVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              Y ++R   G  LID          ++  IA +  +I AA  L +  A   +      
Sbjct: 343 TIPYLQQREQFGKRLIDFQSSPNRIQGLQHQIAQVRTEIEAARLLVYNAARMKEYGIPYV 402

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA A       K +  ++A +  A+ ++ +GG G+ +E    + YR++    I  G+ 
Sbjct: 403 REAAMA-------KLFASQVATSTSAQCVKWLGGVGFTKEFPAEKFYRDAMIGEIYEGTS 455

Query: 448 NAMVLDVLNLLEKGTNL 464
           N  +  +  L++    L
Sbjct: 456 NIQLNTIAKLIDNEYKL 472


>gi|195378841|ref|XP_002048190.1| GJ11482 [Drosophila virilis]
 gi|195404194|ref|XP_002060435.1| GJ19560 [Drosophila virilis]
 gi|194140953|gb|EDW57380.1| GJ19560 [Drosophila virilis]
 gi|194155348|gb|EDW70532.1| GJ11482 [Drosophila virilis]
          Length = 420

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 144/438 (32%), Gaps = 47/438 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
             L  L+A+        +   G  + L+   Q+   +A   T     P    Y   G   
Sbjct: 10  PALRQLVASRTYAAVSHVSPTGPCFALTEEQQQFQELARKFTREEIIPVAAQYDKTG--- 66

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      +++++   GL  +        +          A             +  
Sbjct: 67  ---EYP---WPIIKKAWELGLMNNHVPAELGGLDLDVFTTCLTAEELAYGCTGIMTALEA 120

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V L       K +  ++ +               +     +TE   G+D+A I
Sbjct: 121 SGLGQTPVILSGNKEQKKKYLGRLLAE-------------PLVAAYCVTEPGAGSDVAGI 167

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 168 KTRAEKKGDEYVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDTPGLT 227

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 228 PGRKELNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGAV 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L EA+ YA  R   G  +     ++  +AD+A+ +  +       A   D+ + 
Sbjct: 285 GLAQRCLDEALKYALERKAFGVPIAHHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRR 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K     MA  + ++A++  GG+G+  +  + +  R++    I  G
Sbjct: 345 NS-------YYASIAKCHAADMANKIASDAVQIFGGNGFNSDYPVEKLMRDAKIYQIYEG 397

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     L +   + +   
Sbjct: 398 TSQIQRLIISRNMYEAAK 415


>gi|254241359|ref|ZP_04934681.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192]
 gi|126194737|gb|EAZ58800.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192]
          Length = 393

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 138/379 (36%), Gaps = 21/379 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+ +  P    L R+    GL        +        AH +    +   A   
Sbjct: 32  PRAEEADRTDQFPM--DLWRKFGDMGLLGLTVPEQYGGSGMGYLAHMVAMEEISRAAGGI 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQINRNGTAEQKAKYLPKLVSGEH-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P  D  ++ A+ +   G   +   + + + 
Sbjct: 137 GSDVVSMKLRAEKRGDRYVLNGNKMWITNGPDCDILVVYAKTDLAAGAKGMTAFILETNT 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V+ +   +  + A++S   
Sbjct: 197 PGFSVAQKLDKLGMRGSHTGELVFQDVEVPAENVLGQVGEGVKVLMSGLDYERAVLSGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ ++   + Y   R   G  + +  +++  +AD+   + A+ A  + +    D   
Sbjct: 257 LGLMQAAMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQASRAYLYSVGKHLDA-- 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++     R        +  + A  +  EA++ +GG+GYI E ++ R +R++    I  
Sbjct: 315 QGTDHVRQVRKDCAGVILYAAEKATWLAGEAIQILGGNGYINEFAVGRLWRDAKLYEIGA 374

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 375 GTSEIRRMLIGRELFNETK 393


>gi|229590748|ref|YP_002872867.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas
           fluorescens SBW25]
 gi|229362614|emb|CAY49522.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas
           fluorescens SBW25]
          Length = 582

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 172/474 (36%), Gaps = 45/474 (9%)

Query: 42  LLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           +L   +    +       E L   +     +E AR +      L++     G RW   +V
Sbjct: 16  VLEHWLQAPDTWRRSPAFEALDLPLALQVLEEAARFSQGVLAPLNSQGDRQGCRWQAGQV 75

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                +    R  +  G        +       Q  +     +   +          +  
Sbjct: 76  STPDGFVEAYRAYVEGGWPALACAEAAGGQGLPQLLEAALQEMLYASNHAWAMYTGIAHG 135

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +     P +   + P+I S +  PT             + LTE + G+D+  +  +
Sbjct: 136 AYLCLKAHAAPWLQARYLPEIVSGQTLPT-------------MCLTEPQAGSDVGLLRCR 182

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDGS 266
            +  +DG Y LSG K F+S    D       ++LA+V         +  FLVP+ L+DG 
Sbjct: 183 AEPQADGSYRLSGSKIFISGGEHDLTANILHLVLARVPDAPPGSRGISLFLVPKQLDDGQ 242

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           PNG+    +++K+G + +AT  L F    G+L+G  N     +  M     L   +  + 
Sbjct: 243 PNGVRCDGIEHKMGIKGSATCSLVFDGAQGWLIGATNRGLAAMFVMMNSARLHVGLQGLG 302

Query: 327 GMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALS 373
            +  +   A  YA  R                   +   P M+R + ++        A+ 
Sbjct: 303 HVEAAWQNARQYAAERLQMRAPSRPEEVVAQAADPIRYHPAMRRVLLELRTTSEGMRAIG 362

Query: 374 FRLANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  A+  D+A+   +   A  A ++ PI K +  +      + A++  GG GY+ E +I 
Sbjct: 363 YWAAHLLDQAEHDQDSSAAQLAPLLTPIIKAFFTEQGFRQASHALQVFGGYGYVTEFAIE 422

Query: 432 RHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           +  R+S    I  GS       L +  +L      F  L      + G  G+ V
Sbjct: 423 QTLRDSRIAMIYEGSNEIQANDLLLRKVLGDEGRAFGLLLDAFRAEAGQGGQSV 476


>gi|195126441|ref|XP_002007679.1| GI12250 [Drosophila mojavensis]
 gi|193919288|gb|EDW18155.1| GI12250 [Drosophila mojavensis]
          Length = 420

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 73/433 (16%), Positives = 143/433 (33%), Gaps = 47/433 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
             +  L A+        +   G  + L+   Q+L  +A   T     P    Y   G   
Sbjct: 10  PAIRQLAASRCYAAVSHVSPTGPSFALTEEQQQLQELARKFTREEIIPVAAQYDKTG--- 66

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      +++++   GL  +        +          A             +  
Sbjct: 67  ---EYP---WPIIKKAWSLGLMNNHIPAELGGLELDVFTTCLTAEELAYGCTGIMTALEA 120

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V L       K +  ++              +  +     +TE   G+D+A I
Sbjct: 121 SGLGQTPVILSGNKEQKKKYLGRLL-------------EEPLVAAYCVTEPGAGSDVAGI 167

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + D    GL 
Sbjct: 168 KTRAEKKGDEYVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVDRETPGLT 227

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 228 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGAV 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L EA+ YA  R   G  +     ++  +AD+A+ +  +       A   D+ + 
Sbjct: 285 GLAQRCLDEALKYALERKTFGVPIAHHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRR 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K     MA  + ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 345 NS-------YYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEG 397

Query: 446 SGNAMVLDVLNLL 458
           +     L +   +
Sbjct: 398 TSQIQRLIISRNM 410


>gi|157107359|ref|XP_001649744.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108879621|gb|EAT43846.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 630

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 164/423 (38%), Gaps = 50/423 (11%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            + +        + L  T    + + PK+                       LTE   G+
Sbjct: 153 FIGAHQSIGFKGILLYGTKEQKEKYLPKV-------------STGRTYAAFALTEPSSGS 199

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLL 262
           D  +I  +  K  DG  Y L+G K ++S+  ++D   + AQ    + R G     V   +
Sbjct: 200 DAGSIRCRAVKTPDGKHYVLNGSKIWISNGGIADIMTVFAQTEIEDPRTGQKKDKVTAFI 259

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G+     +NK+G + + T E+ F +    +    NV  G     K+ +  L++ 
Sbjct: 260 VERGFGGVTSGPPENKMGIKCSNTAEVYFEDCKIPI---ENVLGGEGNGFKVAMNILNNG 316

Query: 322 IMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              ++      MR  + +A  +A  R   G  L     ++  +A +A+   A  ++++ +
Sbjct: 317 RFGMAATLSGTMRACIQKATEHATNRVQFGRKLETYGGIQEKLARMAMHHYATQSMAYMI 376

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + + D   +         + A I+K +  + A  V  EA++ +GG G++++  + R  R+
Sbjct: 377 SGNMDSGSTD------YHLEAAISKVFASESAWYVCDEAIQILGGMGFMKDAGLERVMRD 430

Query: 437 SPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS--- 492
                I  G+ + + L V L  ++   +  ++L    +    + G       R +I    
Sbjct: 431 LRIFRIFEGTNDILRLFVALTGIQYAGSHLKELQKAFKNPAANLGLIFKEGSRRAIRSIG 490

Query: 493 ---------LCKEDKGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHST 541
                    +    K  A+  +E I +   A  + L + G   + + F+ NR  D    T
Sbjct: 491 YGGTDLAPFVAGPLKDSAKQCSESIDIFGQAVESLLIKHGKGIVEEQFMLNRLADAAIDT 550

Query: 542 HCM 544
           + M
Sbjct: 551 YAM 553


>gi|70732972|ref|YP_262745.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68347271|gb|AAY94877.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 601

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 181/489 (37%), Gaps = 56/489 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDQEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + ++   T    + +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTAEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    L++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADGSVGQRNAVSCGSLEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   +     + YAR R  
Sbjct: 264 ATCVMNFDAATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KKADALLAFMTPIAKAFMTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARF 503
                LD+L   +L       +     + +   ++ G + +      ++   ++ G    
Sbjct: 444 TGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEGNEAVKEFVAPLAALNKEWGE--- 500

Query: 504 LTEKIALAS 512
           LT K+ +A+
Sbjct: 501 LTMKVGMAA 509


>gi|134055821|emb|CAK37343.1| unnamed protein product [Aspergillus niger]
          Length = 437

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 141/384 (36%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E      A++ +    GL        +          I A       
Sbjct: 76  EQISPKVRDMDEAETMD--PAVVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVAIEELARV 133

Query: 145 QLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +  +      +  + W PK+               T       L+
Sbjct: 134 DPSVSVLVDVHNTLVNTSIMKYGDAQAKRTWLPKL--------------ATGTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  ++  S  F++ A ++   G   +   + 
Sbjct: 180 EPASGSDAFALKTKAEKTADGYKINGSKMWITNAMESGVFLVFANLDPSKGYKGITAFIV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +    L+   N+     +  K  I  L+   
Sbjct: 240 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILNEGR 296

Query: 323 MSVSGMRVSLA-----EAIHY-ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA      A  Y    R   G ++ +   M+  +A    +IAAA AL +  
Sbjct: 297 IGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVYNA 356

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 357 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRD 409

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 410 SKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|125051|sp|P26440|IVD_HUMAN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial;
           Short=IVD; Flags: Precursor
 gi|306897|gb|AAA52711.1| isovaleryl-coA dehydrogenase (IVD) [Homo sapiens]
 gi|6636436|gb|AAF20182.1| isovaleryl dehydrogenase [Homo sapiens]
 gi|189054861|dbj|BAG37702.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|158314022|ref|YP_001506530.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109427|gb|ABW11624.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 387

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 62/392 (15%), Positives = 125/392 (31%), Gaps = 27/392 (6%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A  +  +     P     D+ E +P         +  G        S+          
Sbjct: 18  REAVRDLAE-KEIAPFAADADENERYPV--EAHNALVRSGFSAVHIPESYGGQGADSVTT 74

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                        +  + + +      + L  +  + K   P I S E            
Sbjct: 75  CIVIEEVARVCASSSLIPAVNKLGTMPILLSGSEDLKKLVLPSIASGE------------ 122

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
                  L+E+  G+D A++ ++     D         W  ++  S  + ++A  +    
Sbjct: 123 -ATASYALSEREAGSDTASMRTRAHLDGDHWVLNGTKTWITNAGESLWYTVMAVTDPNAA 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
                +   +      G      + K+G + + T E+ F N       ++G+        
Sbjct: 182 KPANGISAFVVRADDPGFEVGSKERKLGIKGSPTREIHFVNCTIPADRIIGEPGTGLRTA 241

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                         +V   + +L  AI Y R R   G  + D   ++  +AD+A+ I AA
Sbjct: 242 LATLDHTRPTIGAQAVGIAQGALDAAIGYVRERRQFGRAIADNQAVQFMLADMAMKIEAA 301

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             + +  A   +  +           +    K +   +A  V  +A++  GG+GY  +  
Sbjct: 302 RHMVYVAAARAERGEPN------LGFITAAAKCFASDVAMEVTTDAVQLFGGAGYTRDFP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           + R  R++    I  G+     + +   L KG
Sbjct: 356 VERMMRDAKITQIYEGTNQIQRVVMSRALLKG 387


>gi|163745662|ref|ZP_02153022.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161382480|gb|EDQ06889.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 575

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/481 (18%), Positives = 173/481 (35%), Gaps = 42/481 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIH 112
                  E V      E  R+ +     L       P       V   P +         
Sbjct: 27  DRFSEASEDVTGAILSEAGRLCDDVLAPLQRGGDLHPAKLENGVVRTSPGFAEGYAAIAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  F  +            +   A L        S      +    +  +  
Sbjct: 87  GGWIGMSADPEFGGMGLPMTLTSAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDAIKN 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y +SG K
Sbjct: 147 LYLPKLISGEWTGT-------------MNLTEPQAGSDVGALSSRAEDNGDGTYAVSGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            ++S   +D       ++LA++ G       +  FLVP+ + D     G  NG+    L+
Sbjct: 194 IYISWGDNDFAGNVCHLVLARLPGAPAGTKGISLFLVPKFIPDENGEPGQRNGVSVVSLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   + T  +++    G+++G        +  M     L      +     +   A+
Sbjct: 254 HKMGLHGSPTAVMQYDKATGWMIGREGGGMAAMFTMMNNARLGVGEQGIGAAEGAYQLAL 313

Query: 337 HYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RS 387
            YA  R             ++D   ++R +  +  DI A+ A++   A + D A++    
Sbjct: 314 DYALERKQGRSPVESGTGTIVDHADVRRMLLSMKADIFASRAIALSCAYASDMARAGQGD 373

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E AA A  + PITK +   +  +V    ++  GG G+IEE   A+  R+    +I  G+ 
Sbjct: 374 EWAARAAFLTPITKAFGTDVGMSVAEMGVQVHGGMGFIEETGAAQFSRDVRVTAIYEGTN 433

Query: 448 NAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               +D++   +  G     +L   +E D  ++      +        +  +    ++T 
Sbjct: 434 GIQAMDLVGRKMMDGGEAANRLLDEIEADAETARDPFPRMADAVWQASETLREATEWITA 493

Query: 507 K 507
           +
Sbjct: 494 Q 494


>gi|116695314|ref|YP_840890.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113529813|emb|CAJ96160.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 136/366 (37%), Gaps = 26/366 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-V 162
             +++     GL        F  +      ++R              L+  +V   S  +
Sbjct: 38  QDIVQDMREMGLFGMTIPEGFGGLELTMEEEVRVVMELCQTSPAFRSLLGTTVGIGSQGI 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  TP     W P++ + E             +     LTE   G+D  ++ +   +  
Sbjct: 98  LMDGTPEQQAAWLPRLATGE-------------ILASFALTEPDAGSDAGSLRTTAVRNG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D        ++  ++P +  F ++A+    + G   V   + D    G+ + +   K+G 
Sbjct: 145 DHYVVNGTKRFITNAPQAGMFTLMARTNPEIKGSAGVSAFIVDARTPGISFGKRDVKMGQ 204

Query: 282 RSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           +   T ++ F N          L    G    MK+L    L  A +SV   R  L +A++
Sbjct: 205 KGAHTCDVIFDNVRVPAENLIGLKEGQGFKTAMKVLDKGRLHIAAVSVGVARRVLRDALN 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   ++ AA  +    A   DE ++ S E       A
Sbjct: 265 YALERQQFGQPICEFQLIQAMLADSQAELYAAECMVIDAARRRDEGRNVSTE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V   A++ +GGSGYI E  I R YR+     +  G+     + +   
Sbjct: 318 SCCKMFATEMVGRVADRAVQILGGSGYISEFGIERFYRDVRLFRLYEGTTQIQQVIIARN 377

Query: 458 LEKGTN 463
           + +   
Sbjct: 378 MIREAR 383


>gi|257057322|ref|YP_003135154.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587194|gb|ACU98327.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 386

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 136/410 (33%), Gaps = 31/410 (7%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
              ++ L     S     LAR             P    +++ E  P      R     G
Sbjct: 4   RPTVQRLLPDTESEDLLALAREIAR-----EELAPLAAEYEEKEIFP--REQFRILGSAG 56

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L    +   +          ++       A +  G  +S    S   +A   +      W
Sbjct: 57  LLGLPYPERWGGGDVPYEVYLQVLEEIAAAWMSVGVGLSVHTMSCYALAHYGSDEQRDRW 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P +                 +     L+E   G+D AA++++ ++  D         W 
Sbjct: 117 LPAMLGG-------------DLLGAYALSEPHAGSDAAALSTRARRDGDAYVVNGVKAWT 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
                +D +  + +     G   +  LL D    G+     + K+G   + T ++ F + 
Sbjct: 164 THGGQADYYTTMVRTSDDGG-KGISCLLVDADTPGMSAAPPERKMGLTGSTTAQMIFEDA 222

Query: 295 FG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+G                 L  A  SV   + +L EA+ YA++R   G  +ID
Sbjct: 223 RVDADRLIGAEGEGLRIALSSLASGRLGIAACSVGLAQAALDEAVAYAKQRTQFGKPIID 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD+A  + +A A     A   D      +++        I K      A  V
Sbjct: 283 FQGLEFLLADMAAAVESARATYLDAARRRDRGLPFQKQS-------SIAKLVATDAAMKV 335

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             +A++  GG+GY  +  + R+ RE+    I  G+     L +   L K 
Sbjct: 336 TTDAVQVFGGAGYTRDFPVERYMREAKVPQIFEGTNQIQRLVIARELRKA 385


>gi|167644104|ref|YP_001681767.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346534|gb|ABZ69269.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 596

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/554 (19%), Positives = 206/554 (37%), Gaps = 73/554 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P          D L +    N PS      E      +    +  A+        L+   
Sbjct: 5   PPVREHAFLLRDVLNIDQHGNLPSFADASFE-----TVEQILEAAAQFTGEVLAPLNHVG 59

Query: 88  GPGGERWDK---VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G  W+K   V+    + A  ++    G      D ++        H +  A   + +
Sbjct: 60  DQQGCVWNKDFTVKTPDGFAAAYKQLCEGGWTGLGSDPAYGGQGLP--HVVNLAFSEMSS 117

Query: 145 QLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  M P +   +  A+ T  + +    + PK+ S E+  T             + L
Sbjct: 118 SANMAFSMYPGLAHGAYSAIHTGGSDQQKDLYLPKMVSGEWTGT-------------MNL 164

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  + ++    +DG Y ++G K ++S+   D       ++LA++EG      
Sbjct: 165 TEPHCGTDLGLLRTKAVPEADGSYRITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVK 224

Query: 252 RVGCFLVPRLL--EDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            +  F+VP+ L  EDGS      G+    L+ K+G   NAT  +++ +  G+L+G+ N  
Sbjct: 225 GISLFIVPKFLPKEDGSVGPRNEGVKCVGLEEKMGIHGNATCVMQYEDAKGWLIGEENSG 284

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQ 352
              +  M     L   +  ++    +   A+ +A+ R   G               +I  
Sbjct: 285 LKLMFVMMNEARLGVGLQGIAQAEAAYQAAVAFAKDRLQ-GRSLTGPKNPEGPADPIIVH 343

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCK 406
           P ++R + +    I    A  F  A   D A    +EA  A+       M P+ K +   
Sbjct: 344 PDVRRMLLESKALIEGGRAFLFWTALHGDLAHQHPDEATRAKAEDYMGLMTPVLKGYLTD 403

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
               + ++AM+  GGSG+ E    +++ R+     I  G+     LD++   L  KG   
Sbjct: 404 KGFKICSDAMQVHGGSGFTEHFPASQYLRDVRIALIYEGTNGIQALDLVGRKLASKGGRA 463

Query: 465 FEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALY 518
               F  ++Q +G + G   +    ++++  K           +  L     A +A+  Y
Sbjct: 464 VMTFFQEVDQFIGENDGDAELKPFVEALAGVKAQLQDGTMWLMQNGLQNPDNAGAASTDY 523

Query: 519 RA--GMNDIADVFL 530
               G+  +A ++ 
Sbjct: 524 MHLFGLTGLAYMWC 537


>gi|42542532|gb|AAH66503.1| Acad8 protein [Danio rerio]
          Length = 414

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G      +         +              +  
Sbjct: 60  PHMAEWDQKEIFPV--EAMRKAAELGFGGIYVNPDVGGSGLSRLDTSIIFEALSTGCVST 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+         + + P + S                     LTE   G
Sbjct: 118 TAYVSIHNMCAWMIDTFGNNEQRERFCPDLCSM-------------QKFASYCLTEPGSG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +      D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +   
Sbjct: 165 SDAASLLTSATLKGDH-YILNGSKAFISGGGDTDVYVVMCRT-GGKGPKGISCLVVEKGT 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   L     G    MK      ++ A  S
Sbjct: 223 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVTNRLGTEGQGFSIAMKGLNGGRINIASCS 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L +   ++  +A++A  + A+  L  + A +  + +
Sbjct: 283 LGAAHASVLLARDHMCVRKQFGETLANSQFLQFKLAEMATKLVASRLLVRQAALALQDGR 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  +  + K +      ++  +A++  GG GY+++ ++ ++ R+   + IL 
Sbjct: 343 PD------AVSLCSMAKLFVTDECFSICNQALQIHGGYGYLKDYAVQQYVRDIRVHQILE 396

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 397 GTNEVMRMIIARSL 410


>gi|29654289|ref|NP_819981.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493]
 gi|161830802|ref|YP_001596739.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331]
 gi|29541556|gb|AAO90495.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493]
 gi|161762669|gb|ABX78311.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331]
          Length = 387

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               E+ R A           P     D     P    L  +    G+     +  +   
Sbjct: 10  DETIEMLREAVQQFAS-EEIAPRAAFIDANNQFP--RDLWPKLGDLGVLGITVNEEYGGS 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T    K + PK+ + E+   
Sbjct: 67  QMGYLAHVIAMEEISRASGSVGLSYGAHSNLCVNQINRFGTETQKKRYLPKLINGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + ++  D         W  + P +D  I+ 
Sbjct: 124 ----------VGALAMSETEAGSDVVGMRLRAEQKGDIFILNGTKMWITNGPEADVVIVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+LN
Sbjct: 174 AKTDPGAGSRGITAFLIEKDFPGYRTAQKLHKLGMRGSDTCELVFDHCEVPKENILGELN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        L      +  M+  L   + Y   R      + +  +++  IAD+ 
Sbjct: 234 KGISVLMSGLDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +A S D  K  S++AA A +       +  + A  V  +A++C+GG+G
Sbjct: 294 TALNASRAYLYAIAQSADAGKIHSKDAASALM-------FAAENATQVALQAIQCLGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R  R++    I  G+     + V   L +   
Sbjct: 347 YITEFPVERFLRDAKLYEIGAGTSEIRRIVVGRELFREGK 386


>gi|254229382|ref|ZP_04922798.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
 gi|151938073|gb|EDN56915.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25]
          Length = 389

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 140/378 (37%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+    P    L       GL     D  F    +   AH +    +   
Sbjct: 29  EHIAPIAANIDRDNQFP--KHLWPLFGDMGLLGVTVDEEFGGADMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   K + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPSQRKKYLPKLIDGTH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNAGSDVISMQLKAENKGDHFVLNGNKMWITNGPDADIVVLYAKTDVNAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + +  G  + +  +K+G R + T EL F+N       +LG+LN     +        +  
Sbjct: 194 ERNVEGFSHAQKLDKLGMRGSNTCELVFNNCVVPKENILGELNQGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  IAD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGNATRKDAAGA-------ILYSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|71737907|ref|YP_276816.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558460|gb|AAZ37671.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 601

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/502 (17%), Positives = 178/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+                + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEW-------------TSTMCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQGNEGNEAVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|103487014|ref|YP_616575.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977091|gb|ABF53242.1| isovaleryl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
          Length = 389

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 146/394 (37%), Gaps = 31/394 (7%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           AR A+     L        R D  ++ P    L       GLH    +  F  +      
Sbjct: 23  ARFADEQIAPL------AARADAEDWFPR-DELWTAMGALGLHGITVEEEFGGLGLGYLE 75

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H I    +   +        + S    + +           + PK+ S E+         
Sbjct: 76  HVIAVEEVSRASAAIGLSYGAHSNLCVNQIRRWGNAEQKAKYLPKLISGEH--------- 126

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                  L ++E   G+D+ ++  +  K+  G        W  ++  +D  ++ A+    
Sbjct: 127 ----VGSLAMSEAGAGSDVVSMKLKADKVQGGYVLNGTKFWITNASHADTLVVYAKTSPD 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309
            G   +   L +    G    +  +K+G R + T EL F++       ++G  N   G +
Sbjct: 183 AGSRGITAFLIEKDMPGFSIGQKIDKVGMRGSPTAELVFTDCEVSEEQVMGPENGGVGVL 242

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   +  A + +  M+  L   I Y R R   G  +    +M+  +AD+ + + +A
Sbjct: 243 MSGLDYERVVLAGLQLGIMQACLDTVIPYVRERKQFGKPIGAFQLMQAKVADMYVMLQSA 302

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +  + +A + D  ++   +AA A ++A        + A  V  EA++ +GG+GY ++  
Sbjct: 303 RSYVYNVAKACDAGQTTRFDAAGAILLA-------SESAVKVAGEAIQALGGAGYTKDWP 355

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + R++R++    I  G+     + +   L     
Sbjct: 356 VERYWRDAKLLDIGAGTNEIRRMLIGRELIGAGA 389


>gi|262381115|ref|ZP_06074253.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|262296292|gb|EEY84222.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B]
          Length = 569

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/458 (20%), Positives = 172/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKREGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +ID P +   +A +   + A   L ++ A   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGRTLLYQTARYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E K + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTLEERKEQKQYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L     FE +  + E + L +   ++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFEAIPCSAEMEPLKARLVEMANKFEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAG 521
           S++  KE +        AR L E  A    A  L +  
Sbjct: 489 SMAKVKESQDQELLDFVARRLMEMAADIIMAHLLIQDA 526


>gi|225627779|ref|ZP_03785816.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254708004|ref|ZP_05169832.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis M163/99/10]
 gi|254710373|ref|ZP_05172184.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis B2/94]
 gi|254714368|ref|ZP_05176179.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M644/93/1]
 gi|254717267|ref|ZP_05179078.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M13/05/1]
 gi|256031867|ref|ZP_05445481.1| Acyl-COA dehydrogenase, short-chain specific [Brucella
           pinnipedialis M292/94/1]
 gi|256160063|ref|ZP_05457757.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti
           M490/95/1]
 gi|256255268|ref|ZP_05460804.1| Acyl-COA dehydrogenase, short-chain specific [Brucella ceti B1/94]
 gi|256369734|ref|YP_003107244.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260169002|ref|ZP_05755813.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261219087|ref|ZP_05933368.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261222465|ref|ZP_05936746.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261315498|ref|ZP_05954695.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261317937|ref|ZP_05957134.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261322147|ref|ZP_05961344.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261758495|ref|ZP_06002204.1| acyl-COA dehydrogenase [Brucella sp. F5/99]
 gi|265988966|ref|ZP_06101523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265998432|ref|ZP_06110989.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|225617784|gb|EEH14829.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|255999896|gb|ACU48295.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260921049|gb|EEX87702.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|260924176|gb|EEX90744.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261294837|gb|EEX98333.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261297160|gb|EEY00657.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261304524|gb|EEY08021.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261738479|gb|EEY26475.1| acyl-COA dehydrogenase [Brucella sp. F5/99]
 gi|262553056|gb|EEZ08890.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|264661163|gb|EEZ31424.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 144/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|209519297|ref|ZP_03268097.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209500246|gb|EEA00302.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 382

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 135/404 (33%), Gaps = 47/404 (11%)

Query: 69  TAQELARMANYN------TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             Q + R A  +       P    +   G   D+V           +    GL   +   
Sbjct: 10  EDQRMIRDAARDFASEQLAPNAAQWDLDGRLPDEVVT---------QLGQLGLLGMVVPP 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSR 181
                         A     +       LMS   +      L   T    + W       
Sbjct: 61  EQGGTYTDYVAYALAIEEIAVGCASCATLMSVHNSVGCGPILQFGTEEQKERWL------ 114

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                  AP+          LTE + G++   + ++ + + DG + L+G K F+++    
Sbjct: 115 -------APLASGKAIGAFCLTEPQAGSEANNLKTRAE-LRDGKWVLNGSKQFVTNAQRA 166

Query: 242 AF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              I+ A  +   G   +   +      G      + K+G R++ T  +   N     + 
Sbjct: 167 KIAIVFAVTDPLAGKKGLSAFIVPTDTPGFIVGHPEKKMGIRASDTCPITLDNC---AIP 223

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPV 354
           + N+   P E +KI L  L+   + ++     +A A       YA  R   G  +I    
Sbjct: 224 EANMLGRPGEGLKIALANLEGGRIGIAAQSAGIARAAFEAARVYANDRQQFGTAIIKHQS 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+   I AA  L    A      K    E       A   K +  ++A  V + 
Sbjct: 284 VANMLADMHTKINAARHLVHHAARLRTLGKPCLSE-------ASQAKLYASEIAEQVCSA 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++  GG G++ +  + RHYR++    I  G+     + +   L
Sbjct: 337 AIQIHGGYGFLNDYPVERHYRDARITQIYEGTSEVQRIVIARQL 380


>gi|146282280|ref|YP_001172433.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145570485|gb|ABP79591.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 379

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 132/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W +   +PA    +      G    +    +            A           
Sbjct: 24  PFAEQWSREHRYPA--EAIGEMAALGFFGMLVPEQWGGSDTGYLAYAMALEEIAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   +  L     +  +D+               P+ +        LTE + 
Sbjct: 82  STIMSVHNSVGCVPILRFGNDQQKRDFL-------------GPLARGEQIGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +++ ++ ++  D        ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKRGISAFIVPTDS 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            G    R+++K+G  ++ T ++ F +    +   L     G    +  L    +  A  +
Sbjct: 189 PGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGGRIGIAAQA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  +I+   +   +AD+A  IA A  +    A   +  +
Sbjct: 249 VGMARAAFEAARDYAGERETFGKPIIEHQAVAFRLADMATQIAVARQMVHHAAALREAGR 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+ +  + R YR+     I  
Sbjct: 309 PALVEASMA-------KLFASEMAERVCSAAIQTLGGYGYLSDFPVERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L +   L
Sbjct: 362 GTSDIQRLVISRNL 375


>gi|317505087|ref|ZP_07963033.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606]
 gi|315663798|gb|EFV03519.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606]
          Length = 576

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/431 (20%), Positives = 164/431 (38%), Gaps = 42/431 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R ++ +         A+ L   A     ++ S        +  
Sbjct: 93  ENIEATRQAGLWGISMPRRYDGLNIPNIVFSMASELIAAADAGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K + P+I + E              ++ + LTE   G+D+  +  +  + +DG
Sbjct: 152 FGTEEQRKKYIPRISAGE--------------SMSMDLTEPDAGSDLQRVMLKATQDADG 197

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G   
Sbjct: 198 TWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKKDGGVTVRHIENKLGIHG 257

Query: 284 NATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           + T EL + N    L GD  +     V  +     L  A  SV   + +  EA+ YA+ R
Sbjct: 258 SPTCELVYKNAKCELCGDRKLGLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKER 317

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----------------EAKS 385
              G  +I  P +   ++ +   + A  +L +  A   D                 E K 
Sbjct: 318 AQFGKKIITFPAVYDMLSRMKAKLDAGRSLLYMTARYVDIYKALEDISRERKLTPEERKE 377

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +    A    PI K    + A     +A+   GGSG+I E    R YR++   SI  G
Sbjct: 378 MKQYTRLADAFTPIAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLC--KED 497
           +    V+  +  +  GT L       E   S   Q L     +++ +  ++++     E+
Sbjct: 438 TTQLQVVAAVRYITNGTYLAIMKEMLETPVSDNLQPLKVRIAELVDLYEEALNKVNSDEN 497

Query: 498 KGLARFLTEKI 508
           +    FL  ++
Sbjct: 498 QEQHDFLARRL 508


>gi|119715626|ref|YP_922591.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536287|gb|ABL80904.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 390

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 125/376 (33%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P         +    H       +          +        A   +
Sbjct: 31  PFAADVDEHARYP--REAAEALLAADFHAPHIPEQYGGAGADALATVIIIEEVARACASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  +  +   +                + +        L+E   G
Sbjct: 89  SLIPAVNKLGSLPIQLAGSEELKAKYL-------------GALARGEGGFSYCLSEPDAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + ++  +  D        +W  ++  S+ + ++A  +       +   + + S  
Sbjct: 136 SDAVGMKARAVRDGDTWVLNGVKRWITNAGESEYYTVMAVTDPEKRSRGISAFVVEKSDE 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE-DMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +    G  E  M+ L    +  A  +V
Sbjct: 196 GVSFGAPEKKLGIKGSPTREVYLDNVRIGADRMIGAEGGGFEIAMRTLDHTRVTIAAQAV 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YA+ R   G  + D   ++  +AD+ + + AA  L++  A   +   S
Sbjct: 256 GIAQGALDYALGYAQERKQFGKPISDFQGLQFLLADMGMKVEAARQLTYAAAGKSERGDS 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V   A++ +GG GY  +  + R  R++    I  G
Sbjct: 316 D------LTFFGAAAKCFASDVAMEVTTNAVQVLGGYGYTRDYPVERMMRDAKITQIYEG 369

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L  G
Sbjct: 370 TNQVQRIVMARQLLAG 385


>gi|323694953|ref|ZP_08109103.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323501043|gb|EGB16955.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 377

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 141/399 (35%), Gaps = 37/399 (9%)

Query: 68  CTAQELARM-ANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+AR  A     P    Y   GE        P   ++ + +   G         F 
Sbjct: 10  REIQEMAREFAEAKIRPVSKEYDLKGE-------TPL--SVYKEAAGLGYTSLCIPEEFG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    I  A  +  A       +  S  +   + L  T    +  A  + +     
Sbjct: 61  GAGLGTFANILVAEEFARADAGFSVAVQASTLAMKPILLAGTKEQKQYAADALINGGM-- 118

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
                           LTE   G+D  AI ++  K  DG Y ++G K F+++ P +D ++
Sbjct: 119 ------------GSFCLTEPDAGSDAGAIRTKAVKK-DGEYIITGRKCFITNAPHADFYV 165

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+ E   G   +   L +    GL   + ++K+G R + T ++            L  
Sbjct: 166 VFAKTEPDAGTKGISAFLVERGREGLSIGKHEDKMGIRLSTTADVILEEVHVPEDHLLGA 225

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M+ L    L+ A M+    + ++  ++ YA+ R   G  +     ++  +AD
Sbjct: 226 EGKGFKLAMQTLDRTRLECAAMAAGLSQRAIDLSVDYAKTRVTFGKPIAKLQAIQFMLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA +L ++ A   D      +       M  + K +  + A     +A++   G
Sbjct: 286 MEIRNQAARSLVYQCAAMIDSGAVDGK-------MNAVAKTFSSEAAMQNTLDAVQIFSG 338

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GY  E  + +  R++    I  G+       +   L K
Sbjct: 339 YGYSREYEVEKLMRDAKIFMIFEGTNQIQRTVIAGHLIK 377


>gi|294626972|ref|ZP_06705562.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598634|gb|EFF42781.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 408

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/386 (21%), Positives = 135/386 (34%), Gaps = 26/386 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLM 143
               P   +WD     P     + ++   G      D     +  R+    +   +L  +
Sbjct: 45  KQLAPHAAQWDAEGHFP--REAIAKAAELGFCGLYTDERVGGLGMRRLDAAVVFQKLATV 102

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                   +S    +  ++A   T  V   W   + S                     LT
Sbjct: 103 GSRPPPAFISIHNMATWLIASYGTDAVRAQWGEAMTSG-------------DRLGSYCLT 149

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +   + 
Sbjct: 150 EPGSGSDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFVV 208

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
                G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ 
Sbjct: 209 PADAPGISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLGKEGEGFKMAMKALDGGRINI 268

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   
Sbjct: 269 AACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHTAARKL 328

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A +   + K +      A+  +A++  GG GYI E  I R  R+S  +
Sbjct: 329 DAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVH 382

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE 466
            IL G+   M + V   L  G     
Sbjct: 383 RILEGTNEVMRMIVARHLLNGEEELR 408


>gi|163931094|pdb|2VIG|A Chain A, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931095|pdb|2VIG|B Chain B, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931096|pdb|2VIG|C Chain C, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931097|pdb|2VIG|D Chain D, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931098|pdb|2VIG|E Chain E, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931099|pdb|2VIG|F Chain F, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931100|pdb|2VIG|G Chain G, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
 gi|163931101|pdb|2VIG|H Chain H, Crystal Structure Of Human Short-Chain Acyl Coa
           Dehydrogenase
          Length = 391

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/387 (20%), Positives = 141/387 (36%), Gaps = 32/387 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 27  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 84

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 85  GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSG-------------DKIGCFALSEPGN 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 132 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPMPT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 192 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 249 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 309 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 361

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           I  G+     L +   L +     E L
Sbjct: 362 IYEGTSEIQRLVIAGHLLRSYRSAENL 388


>gi|6942167|gb|AAF32336.1|AF218939_4 acyl-CoA dehydrogenase [Bacillus subtilis]
          Length = 370

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 138/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+    P      ++    GL    +   +                Y +A  E 
Sbjct: 16  PHAEHVDQTGEFPI--QTFQKMGDLGLMGIPFPEEYGGSGGDTIS-------YALAVEEI 66

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    S  ++ A+ V+L  +P           + E    +  P+         GLTE   
Sbjct: 67  GKACGSTGLSYAAAVSLGASP------LYYFGTEEQKRAHLIPLASGKALGSFGLTEPNA 120

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D     ++     D         W  ++  +   I+ A       G  ++  L+    
Sbjct: 121 GSDAGGTQTKAVIDGDEYVINGEKCWITNASYARTVIVTAVTGKNESGNNIISALIVPTD 180

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL      +K+G R + T E+   +      +LLGD +              +  A +
Sbjct: 181 TPGLTITSPYDKMGVRGSNTAEILLEDVRVHASYLLGDPSKGFKQFLHTLDGGRISIAAL 240

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + +L  ++ YA+ R   G  +     ++  +AD+A++I  A  +  + A   D  
Sbjct: 241 AVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKDHK 300

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  ++EAAYA       K +  +MA     +A++   GSGY+ E ++ R  R++    I 
Sbjct: 301 RPFTKEAAYA-------KLFASEMATRACNQAIQIHAGSGYMREYAVERMLRDAKLMEIG 353

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +   L K
Sbjct: 354 EGTSEIQRIVIARQLLK 370


>gi|71064890|ref|YP_263617.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71037875|gb|AAZ18183.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 395

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 140/383 (36%), Gaps = 26/383 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D  +  P    L ++    GLH       +        AH +    +   +   
Sbjct: 31  PRAAEIDSSDEFPM--DLWQKMGDIGLHGITVPEEYGGSDMGYVAHMVAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCINQLKRNGSEAQKQKYLPKLISGEF-------------IGALAMSETGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++            W  + P +D  ++ A+    +G   +   + +   
Sbjct: 136 GSDVVSMKLKAEEKDGHYVLNGSKMWITNGPDADVMMVYAKTNPELGAKGMTAFIVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T E+ F+N         N+  G  E +K+L+  LD     ++
Sbjct: 196 EGFGTAQKLDKLGMRGSHTGEMTFNNVEVP---KENILGGLNEGVKVLMSGLDYERAVLA 252

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V + +A     + Y   R   G  + +  +++  +AD+   + A  +  + +  + D
Sbjct: 253 AGPVGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSFLYTVGKNLD 312

Query: 382 EAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               R+   +   R        WC + A  +  E ++  GG+GY  E  + R++R++   
Sbjct: 313 MLDQRAAGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYPLGRYWRDAKLY 372

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     + V   L   T 
Sbjct: 373 EIGAGTSEIRRMLVGRELFNETK 395


>gi|295399926|ref|ZP_06809907.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978329|gb|EFG53926.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 381

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 143/377 (37%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +   +   +G  C   D  +       A+ +             
Sbjct: 27  PYYSEWEKKGIIP--RSFWTKMGENGFLCPWVDEKYGGFNADFAYSVVINEELEKVGSSM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +  +   +A   T    + W PK  S E             +   + +TE   G
Sbjct: 85  VGIGLHNDIAVPYLASYGTEDQKRKWLPKCVSGE-------------IITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    +++A + +   +     +  L+ + 
Sbjct: 132 SDLAGISTTAIKDGDH-YIVNGQKTFITNGIHADLVIVACKTDPNAKPSHKGISLLVVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 191 DTPGFTRGRKLDKVGLHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V       Y ++R   G  + +   ++  +A+++ +I         +     +
Sbjct: 251 AAQTAAEVMFELTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQ 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+             + K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I
Sbjct: 311 GKN-------VVTHVSMAKWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 364 YAGTNEMMKTIIARNLD 380


>gi|73538578|ref|YP_298945.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121915|gb|AAZ64101.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 382

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 143/383 (37%), Gaps = 34/383 (8%)

Query: 83  QLHAY-GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L  +       W +         + R++   G+ C+     +       AH+       
Sbjct: 27  ELVPHEDRW---WKQQHVD---REIWRKAGEMGMLCASIPEEYGGGGGNFAHEAVITLEQ 80

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A + +      S   A  +    T    ++W PK+ S E             +   + 
Sbjct: 81  SRAGVSSLGTNVHSGIVAHYILRYGTEAQKQNWLPKMASGE-------------IVAAIA 127

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           ++E   G+D+ +I ++  +  D  Y L+G K F+++  ++D  +++ + +   G   V  
Sbjct: 128 MSEPGAGSDLKSIKARAVRDGD-QYVLNGSKTFITNGFLADLILVVCKTDPDKGAKGVSI 186

Query: 261 LLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL-- 315
           ++ +     G    R+  KIG +   T EL F +        L      G  + M+ L  
Sbjct: 187 VVVETENLPGFRRGRILEKIGQKGQDTAELFFDDVRVPCTNLLGTEEGKGFYQLMQQLPQ 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A+ ++S M  ++     Y R R V G  L+D    +  +A+       A A    
Sbjct: 247 ERMIIALGALSAMERAVELTTDYVRERKVFGATLLDMQNTRFKLAECKTKAVIAGAFV-- 304

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D+  ++          A + K+W  + +  +I E ++  GG GY+ E  IAR Y 
Sbjct: 305 -----DDCMAKVLRDELDPETAAMAKWWGTQTSCEIIDECLQLHGGYGYMMEYPIARMYV 359

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
            +    I  GS   M   +   L
Sbjct: 360 NARVGKIYGGSNEIMKEIIARTL 382


>gi|256061387|ref|ZP_05451531.1| Acyl-COA dehydrogenase, short-chain specific [Brucella neotomae
           5K33]
 gi|261325388|ref|ZP_05964585.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261301368|gb|EEY04865.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 144/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDCFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|197097734|ref|NP_001125424.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pongo abelii]
 gi|55728011|emb|CAH90758.1| hypothetical protein [Pongo abelii]
          Length = 412

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 140/380 (36%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     L +   L +G
Sbjct: 390 IYEGTSEIQRLVIAGHLLRG 409


>gi|292653659|ref|YP_003533557.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291369845|gb|ADE02073.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 381

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 137/360 (38%), Gaps = 24/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           + ++ ++   GL  S +      V      +                 ++ +   +  + 
Sbjct: 39  YEIMEQAAELGLIGSQFPVEHGGVGYSLLERAFLTEELFAIDPGTALCITSADFGSEAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P             P+      +G  ++E + G+D+++I +Q ++  D
Sbjct: 99  AFGTEAQKETYLP-------------PVATGEAIMGAAISEPQAGSDVSSIATQAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                    W  +  + D F++L +   +         +++ +   +G   +++  K+G 
Sbjct: 146 KWVINGNKMWITNGSVGDYFVVLCETNPDAERRHGGFSQIIVESDRDGFDAEKITGKMGM 205

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           R++ T EL  ++        +  V  G  + M+         A  ++   R +   A+ Y
Sbjct: 206 RASDTAELILNDVRVPAENLVGEVDGGFYQQMQFFDETRTMVAAQALGIARGAAERALEY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  L     ++  +A++  +I AA  L+++     +E             ++ 
Sbjct: 266 AQEREQFGQTLSGFQAIQHKLAEMFTNIEAARQLTYKATWGVEEGHDDD------TSLSS 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K +  ++A  V  EA++  GGSGY+ +  + R YR++  + I  G+       +   L
Sbjct: 320 MAKEFASRVAVDVTNEAVQIHGGSGYVNDFDVERFYRDAKISQIYEGATEIQKGIIAREL 379


>gi|257455691|ref|ZP_05620920.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257446974|gb|EEV21988.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 606

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/411 (18%), Positives = 147/411 (35%), Gaps = 56/411 (13%)

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G  +DK  V     +       +  G     +   F  +       +   +  +M  
Sbjct: 63  DAEGCHFDKGVVTTPKGFKEAYDMFVEAGYQAIPFPEEFSGLNMP--MSVNLIKSEMMGT 120

Query: 146 LEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 M P ++   M  +    TP     + P +    +  T             + LT
Sbjct: 121 ANWAFSMYPGLSVGCMNTIMQYGTPEQKATYMPALVEGRWSGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGR 252
           E + GTD+  + ++     DG Y +SG K F+SS   D       I+LA++         
Sbjct: 168 EPQCGTDLGQVKTKAIPQDDGTYKISGTKIFISSGEHDLTENIVHIVLARLPDAPEGTKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+VP+ L       G  N +    +++K+G +++AT  L F N  G+L+G+ N    
Sbjct: 228 ISLFIVPKFLVTENGDIGERNPVNCGSIEHKMGIKASATAVLNFDNATGYLIGEPNKGLK 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------------VSGGILIDQPVM 355
            +        L + +  ++ M ++   ++ YA+ R                  +I    +
Sbjct: 288 AMFTFMNTARLGTGMQGLAHMELAFQNSLPYAKERRSMRTLSGTKEPNQVADAIIHHADV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFD---------EAKSRSEEAAYARIMAPITKYWCCK 406
            R +         A ++ +  +   D         +     +         PI K +  +
Sbjct: 348 ARMLLTQKAFSEGARSMIYHASRYADKMFEGAMLGDDAEFHKWDDKLGFYTPILKGFLTE 407

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           ++       M+  GG GYI+E  + +  R++  +++  G+     LD+L  
Sbjct: 408 LSIECAKHGMQIYGGHGYIKEWGMEQIARDARISTLYEGTTGVQALDLLGR 458


>gi|148560349|ref|YP_001259225.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|294852648|ref|ZP_06793321.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|148371606|gb|ABQ61585.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|294821237|gb|EFG38236.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 385

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/394 (20%), Positives = 147/394 (37%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ         +WD+ +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQ-------APQWDRDKHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|118469937|ref|YP_889443.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
 gi|118171224|gb|ABK72120.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
          Length = 380

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 113/297 (38%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + W P I S E             + I + +TE   G+D+A I +   +  D  
Sbjct: 103 ANDEQRRRWLPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++A+ +   G       + +    G    R  +K+G  S 
Sbjct: 149 WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERGMEGFTRGRKLDKMGLHSQ 208

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R    E + Y + 
Sbjct: 209 DTSELHFENVRVPHANLLGKEGRGFYHLMTNLPSERLSIAISAIAGARAVFDETLQYCKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R      + +  + EAA A+       
Sbjct: 269 RKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVDGELTAVEAAKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            W  + A  ++   ++  GG GY+ E  +AR Y +    +I  G+   M   +   L
Sbjct: 323 -WATETAKKIVDNCVQLHGGYGYMMEYRVARAYVDGRIQTIFGGTTEIMKEIIGRDL 378


>gi|325123576|gb|ADY83099.1| acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 390

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/360 (20%), Positives = 131/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ V 
Sbjct: 52  RDLWNKAGELGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYVN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E             V   + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------VVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  +++ +      G   +  ++ + +  G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAVVVCKTGNSDKGSANLSLIIVEANRAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      E K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLEEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   ++ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKIVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|88796988|ref|ZP_01112578.1| Isovaleryl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88779857|gb|EAR11042.1| Isovaleryl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 385

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 143/398 (35%), Gaps = 33/398 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P  E  D     P    L       GL     +      
Sbjct: 10  GDTLDALRDAVRAFAQ-KEIAPRAEEIDLTNAFP--RDLWPAMGELGLLGITVEEELGGS 66

Query: 128 V-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH +    +   +        + S    + +    +      + PK+ S E+   
Sbjct: 67  GLGYAAHAVAMEEISRASASVGLSYGAHSNLCVNQIRKNASAEQKAKYLPKLISGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +   D         W  + P +D  ++ 
Sbjct: 124 ----------VGALAMSEPGAGSDVVSMKLKAEDKGDHYLLNGNKMWITNGPDADVLVVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   L +    G    +  +K+G R + T EL F +         N+  
Sbjct: 174 AKTDPNGGKRGISCFLIEKDFPGFKTAQKLDKLGMRGSNTCELVFEDCKVP---KENLMG 230

Query: 307 GPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              + +KIL+  LD   + +S      M+ ++   + Y   R   G  + +  +++  +A
Sbjct: 231 KEGDGVKILMSGLDYERVVLSAGPLGIMQAAMDIVLPYVHERKQFGQAIGEFQLVQGKLA 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  ++ A+ A  + +A + D  ++  ++AA A         +  + A  V  +A++ +G
Sbjct: 291 DMYTNLNASRAYVYAVAAACDRGETTRKDAAGA-------ILYAAEKATQVALDAIQLLG 343

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E +  R  R++    I  G+     + +   L
Sbjct: 344 GNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 381


>gi|288962555|ref|YP_003452850.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288914821|dbj|BAI76306.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 381

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 134/372 (36%), Gaps = 27/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P     LR +   G+               +   +             
Sbjct: 26  PNAVDWDQKKHFPI--DTLRAAGALGMGGIYVSEDQGGSALSRLDAVVIFEALSQGCPTI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A MV           W P++ + ++                  LTE   G
Sbjct: 84  ASYISIHNMVAGMVDRFGDDAQKAHWLPRLCTMDW-------------LASYCLTEANAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  DG Y L+G K F+S    SD ++++A+  G  G   +   L     
Sbjct: 131 SDAAALRTRAVRDGDG-YILNGAKQFISGAGSSDLYLVMART-GEDGPGGISAFLVPKDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   ++K+G  +  T  +   +        LG   +             ++ A  S
Sbjct: 189 AGLSFGSNEHKMGWNAQPTRAVILEDARVPATARLGQEGMGFKFAMAGLDGGRINIAACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L +A+ Y   R   G  L     ++  IAD+A ++ AA     R A++ D   
Sbjct: 249 IGGAQAALDKALTYMSERKAFGQTLDRFQALQFRIADMATELEAARTFVHRAASALDAG- 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A  A  +  + K +       V   A++  GG GY+ +  + +  R+   + IL 
Sbjct: 308 -----AKDATRLCAMAKRFATDTGFEVANNALQLFGGYGYLADYGVEKIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLN 456
           G+   M L V  
Sbjct: 363 GTNEIMRLIVSR 374


>gi|188590905|ref|YP_001795505.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|170937799|emb|CAP62783.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 393

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 142/396 (35%), Gaps = 24/396 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFE 125
               E+ R A  +  Q       GE  D+ +  P  AW  +    +   L  ++ +    
Sbjct: 12  GEDIEMLRGAVRDWAQAELAPRAGE-IDRTDQFPMDAWKKMGDLGV---LGITVAEEYGG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH I    +   +        + S    + +    T      + PK+ S ++  
Sbjct: 68  ANMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKAKYLPKLVSGDW-- 125

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + Q   D         W  + P  D  ++
Sbjct: 126 -----------IGALAMSEPNAGSDVVSMKLRAQLKGDRYVLNGTKMWITNGPDCDVLVV 174

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ E  +G   +   + +    G    +  +K+G R + T EL F +    +   L   
Sbjct: 175 YAKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPVENILGAE 234

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G  + +   +  + A++S   V  M+  +     Y   R   G  + +  +++  +AD+
Sbjct: 235 NGGAKVLMSGLDYERAVLSGGPVGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKVADM 294

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA +  + +  + D     S+     R        +  + A  +  E ++ +GG+
Sbjct: 295 YTTLQAARSYLYTVGKNLDA--LGSDHVRQVRKDCAAVILYTAEKATWMAGETVQILGGN 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI E    R +R++    I  G+     + +   L
Sbjct: 353 GYINEYPAGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|153009201|ref|YP_001370416.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561089|gb|ABS14587.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 385

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 136/373 (36%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ +  P    +L+ +   G+              K+   +        A    
Sbjct: 32  PHALQWDRDKHFPV--DVLQETGPLGMGGIYVREDVGGSELKRLDAVLIFEALATACPSF 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+           + PK+ S E+                  LTE   G
Sbjct: 90  SAFVSIHNMAAWMIDTFGNDEQRLRFLPKLTSMEW-------------LASYCLTEPGSG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  +  D  Y L+G K F+S   +    +     G  G   +  ++      
Sbjct: 137 SDAAALRTRATRDGDH-YILNGSKQFISGAGATDVYVTMVRTGEDGPKGISTIVVPKDAP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   + K+G  +  T  + F N       LLG+                L+ A  S+
Sbjct: 196 GLSFGANEFKMGWNAQPTRTVIFDNCRVPAENLLGEEGTGFRIAMAGLDGGRLNIAACSL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L +++ Y  +R   G  +     ++  +AD+  +++A+  L +  A+  D    
Sbjct: 256 GGAQSALDKSLEYCSQRKAFGQTIDRFQALQFRLADMETELSASRLLLYSAASKLDRKTH 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A   + + K +       V  EA++  GG GY+ E  I +  R+   + IL G
Sbjct: 316 D------AGKWSAMAKRFVTDTGFNVANEALQLFGGYGYLHEYGIEKLVRDLRVHQILEG 369

Query: 446 SGNAMVLDVLNLL 458
           +   M + +   +
Sbjct: 370 TNEIMRVIIARQM 382


>gi|37676706|ref|NP_937102.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
 gi|37201249|dbj|BAC97072.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016]
          Length = 400

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 138/388 (35%), Gaps = 32/388 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAH 133
             AN +   L          D+    P    L  +    GLH       +    +   AH
Sbjct: 36  AFANEHIAPL------AADIDRANHFPDH--LWTKLGEMGLHGVTISEEYGGADMGYLAH 87

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    +   +   A    + S    + +      +    + P + S E+          
Sbjct: 88  VVAMEEISRASASVALSYGAHSNLCINQIYRNGNAQQKAHYLPALISGEH---------- 137

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++  + ++  D         W  + P +   ++ A+   + 
Sbjct: 138 ---IGALAMSEANSGSDVVSMQLKAKEKGDHFVLNGSKMWITNGPDAHTVVVYAKTNPKA 194

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   + + +  G    +  +K+G R + T EL F +       +LG++N     + 
Sbjct: 195 EAHGITAFIVERAFPGFHSAQKLDKLGMRGSNTSELVFEDCLVPKENVLGEVNHGVRVLM 254

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  +  A   +  MR  L   I Y   R   G  + +  +++  +AD+   + AA 
Sbjct: 255 SGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYTQMNAAR 314

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  +   ++AA           +  ++A  +  +A++ +GG+GY+ E   
Sbjct: 315 SYVYTVAAACDRGEVTRKDAAG-------VILYSAELATRMALDAIQLLGGNGYVNEFPT 367

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R  R++    I  G+     + +   L
Sbjct: 368 GRLLRDAKLYEIGAGTSEIRRMLIGREL 395


>gi|33603919|ref|NP_891479.1| isovaleryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33568895|emb|CAE35309.1| isovaleryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 392

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 134/379 (35%), Gaps = 21/379 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAEIDRSDQFPM--DLWRKFGDLGVLGMTVSDEYGGTGLGYLAHMVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIFRNGSEAQKARYLPKLVSGEH-------------VGALAMSEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +  D         W  + P +D  ++ A+ +       +   L +   
Sbjct: 136 GSDVVSMRLRADRKGDRYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGITAFLVEKGF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V  +   +  + A++S   
Sbjct: 196 KGFSVAQKLDKLGMRGSHTGELVFEDCEVPEENVLGQVNGGVRVLMSGLDYERAVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +  + D+  
Sbjct: 256 LGIMQGVMDVVVPYIHDRKQFGQAIGEFQLIQGKIADMYSVLQASRAFCYAVGRNLDQLG 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +        R        +  + A  +  E ++ +GG+GYI E  + R +R++    I  
Sbjct: 316 AGHVRQ--VRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYPVGRMWRDAKLYEIGA 373

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 374 GTSEIRRMLIGRELYAETA 392


>gi|153005024|ref|YP_001379349.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028597|gb|ABS26365.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 135/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD+ E  P    ++R     GL        +        A  +    +       
Sbjct: 36  PRARAWDEKEEFP--WEVVRELGPLGLLGIAVPEEYGGAGMGALAVAVVVEEIARYDGSL 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +      +    +    + W P             P+ +       GLTE   
Sbjct: 94  ALTVASHNGLGTGHILRFGSEEQRRRWVP-------------PLARGEKLAAWGLTEPGS 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +   +  D         +     + D F++LA  E       +   + +   
Sbjct: 141 GSDAAGLRTTAVRRGDRWLLNGAKTFITQGTVGDTFVVLANTEPERKQHGITAFVLEKGA 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G   + +  K+G RS+ T EL            L  V+ G V  ++IL    +    ++
Sbjct: 201 KGFSQRPIHGKLGMRSSDTAELHLDEVEVPDAQRLGEVNQGFVNTLQILDRGRITIGALA 260

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L E+  YA+ R   G  + +   +   +AD+A ++AAA  L  R A   D  +
Sbjct: 261 VGLARGALEESRAYAKERRTFGRPIAEHQAVAFMLADVATEVAAARLLVHRAAALCDAGE 320

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  + A     +A++  GG GY  +  + R++R++    I  
Sbjct: 321 PFGAEASMA-------KLFASEAAMRATTKAVQIHGGYGYTRDFPVERYFRDAKLTEIGE 373

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   + +
Sbjct: 374 GTSEIQRLVISRAVLR 389


>gi|320158808|ref|YP_004191186.1| isovaleryl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
 gi|319934120|gb|ADV88983.1| isovaleryl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 138/388 (35%), Gaps = 32/388 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAH 133
             AN +   L          D+    P    L  +    GLH       +    +   AH
Sbjct: 25  AFANEHIAPL------AADIDRANHFPDH--LWTKLGEMGLHGVTISEEYGGADMGYLAH 76

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    +   +   A    + S    + +      +    + P + S E+          
Sbjct: 77  VVAMEEISRASASVALSYGAHSNLCINQIYRNGNAQQKAHYLPALISGEH---------- 126

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++  + ++  D         W  + P +   ++ A+   + 
Sbjct: 127 ---IGALAMSEANSGSDVVSMQLKAKEKGDHFVLNGSKMWITNGPDAHTLVVYAKTNPKA 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   + + +  G    +  +K+G R + T EL F +       +LG++N     + 
Sbjct: 184 EAHGITAFIVERAFPGFHSAQKLDKLGMRGSNTSELVFEDCLVPKENVLGEVNHGVRVLM 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  +  A   +  MR  L   I Y   R   G  + +  +++  +AD+   + AA 
Sbjct: 244 SGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYTQMNAAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  +   ++AA           +  ++A  +  +A++ +GG+GY+ E   
Sbjct: 304 SYVYTVAAACDRGEVTRKDAAG-------VILYSAELATRMALDAIQLLGGNGYVNEFPT 356

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R  R++    I  G+     + +   L
Sbjct: 357 GRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|212533453|ref|XP_002146883.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|212533455|ref|XP_002146884.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072247|gb|EEA26336.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072248|gb|EEA26337.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 438

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 132/360 (36%), Gaps = 32/360 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
            +    GL        +          I A             ++    T  +   +   
Sbjct: 98  EQLFEQGLMSIEIPEEYGGSGMNFTSAIIAIEELARVDPSVSVMVDVHNTLVNTAVMKYG 157

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  V + W P++ S                     L+E   G+D  A+ ++ +K +DG  
Sbjct: 158 SAEVQRTWLPQLASG--------------TVGSFCLSEPASGSDAFALQTKAEKTADGYK 203

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +S  +  FI+ A ++   G   +   + +    G    + + K+G R+++T
Sbjct: 204 INGSKMWITNSMEAGFFIVFANIDPSKGYKGITAFIVEKGTPGFSIAKKEKKLGIRASST 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YA- 339
             L F +     +   N+     +  KI I  L+   + ++     LA         YA 
Sbjct: 264 CVLNFDDV---EIPKANLLGEEGKGYKIAIGILNEGRIGIAAQMTGLALGAWENAAGYAW 320

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G ++ D   M+  IA    +IAAA AL +  A   +  +    +AA A      
Sbjct: 321 NDRKQFGQLIGDFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVMDAAMA------ 374

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+
Sbjct: 375 -KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLTTIAKQLQ 433


>gi|170087346|ref|XP_001874896.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82]
 gi|164650096|gb|EDR14337.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82]
          Length = 420

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 134/386 (34%), Gaps = 32/386 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P     DK+   P    L  +    GL        +  +     +   A      A    
Sbjct: 63  PRASEIDKMNTFP--PDLWEKLGSMGLLGVTVAPEYNGLGLGYFYHTLAMEALSTASGSV 120

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + P +                     L ++E   
Sbjct: 121 ALSYGAHSNLCVNQIHRHGTEEQKAKYLPDLV-------------NGVKVGSLAMSETGS 167

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K++ G        W  + P++   ++ A+     G   +   + +   
Sbjct: 168 GSDVVSMKLKAKKVAGGWSLTGNKFWITNGPVASTLVVYAKTSPEKGSKGITAFIVENIF 227

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G       +K G R + T EL F +       +LG ++   G +     L  +  +   
Sbjct: 228 DGFSTSPKLDKFGMRGSDTCELVFDSCVVPDSNILGKVDQGAGVLMSGLDLERIVLSGGP 287

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +   A+ Y   R      +    +M+  IAD+   + A+ +  + +A + D+ K
Sbjct: 288 LGLMQAAFDYAVEYVHDRKQFDKPVGTFQLMQAKIADMYTKLNASRSYVYAVAKACDQGK 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++ A A            + A  V  E M+C+GG+GYI +  + R  R+S   ++  
Sbjct: 348 VSRKDCAGA-------ILHSTEKAVEVALEGMQCLGGNGYINDYPMGRIVRDSRLYTVGA 400

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFS 470
           G+           +  G    EQL  
Sbjct: 401 GTQEI------RRMLIGREFNEQLLK 420


>gi|109897732|ref|YP_660987.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700013|gb|ABG39933.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 606

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/451 (18%), Positives = 169/451 (37%), Gaps = 57/451 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIH 112
            E       ++    QE A+        L+      G ++D  V   P  + A   + + 
Sbjct: 29  PEFAEATPDLVDAILQECAKFCENELLPLNQSGDKEGCKFDNGVVTTPTGFKAAYNKYVE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRV 170
            G                 +  +  A+  +M        M P ++  +M  +    T   
Sbjct: 89  GGWQSLSHPVEHGGQGLPPS--LGMAKQEMMGTANWSWAMYPGLSHGAMNTIQSHGTQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + +  ++    +  T             + LTE + GTD+  + ++     DG Y + G
Sbjct: 147 KELYLTRLTEGTWTGT-------------MCLTEPQCGTDLGQVKTKAIPNDDGTYDIVG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F+S+   D       I+LA++ G       +  F+VP++  D     G  N +    
Sbjct: 194 TKIFISAGEHDLTENIIHIVLARLPGAPEGTRGISLFIVPKVQVDQQGNLGEGNKVTCGA 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G ++++T  L F N  G L+G  N     +        + +A+  V    ++   
Sbjct: 254 IEDKMGIKASSTAVLNFDNAKGVLIGPENKGLECMFTFMNTARVGTALQGVCASELAYQN 313

Query: 335 AIHYARR----RHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++ YA+     R ++G          +I  P +++ +           A+ +  A   DE
Sbjct: 314 SLLYAKDRLSMRALTGKKCPDKVADPIIVHPDVRKMLMTQKAISEGGRAMIYYTAKIVDE 373

Query: 383 ------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                    R +       + PI K +  +M     ++ M+  GG GYI+E  + +  R+
Sbjct: 374 IEMAKTDAEREKADDRLGFITPILKAFLTEMGCESTSQGMQIFGGHGYIKEWGMEQIVRD 433

Query: 437 SPANSILLGSGNAMVLDVLN---LLEKGTNL 464
              +++  G+     LD+L    LL +G +L
Sbjct: 434 VRISTLYEGTTGIQALDLLGRKILLTRGKSL 464


>gi|298246002|ref|ZP_06969808.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297553483|gb|EFH87348.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 386

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 133/378 (35%), Gaps = 27/378 (7%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  E WD+    P    +  +    GL            +  +              +
Sbjct: 24  ITPHAESWDEHNHFP--REIFTKMAELGLMGMTTPEELGGSMLSRLAAALVYEELAQGDM 81

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +S        +A        + W  K+ S E                   L+E  
Sbjct: 82  ATAVGLSVHNMITGSIARFGDEEQRERWVGKLASGE-------------ALGAFSLSEAA 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A++  + ++  D         W  ++  +D ++++A+         +     +  
Sbjct: 129 AGSDAASLQCRAERSGDSYILNGNKLWVTNAGEADIYLLMARTAPGNDASGISCFAIEKD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G  + + + K+G  S+ T EL F N    +   L       +  KI L  LD   +++
Sbjct: 189 TPGFAFGKTERKMGLHSSPTRELIFENCQIPVSQRLG---EEGQGFKIALSSLDGGRINI 245

Query: 326 -----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                   + +   A  YA+ R   G  +     ++  +AD+A+ I A+  L +  A   
Sbjct: 246 GAVAVGVAQAAFETARQYAQERQQFGKSIGTFQAIEFMLADMAMKIEASRLLVYEAAYKL 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+++  S++ +     A + K +    A  V   A++ +GG+GY+ +  + R+ R+    
Sbjct: 306 DQSRQPSKQVSM---YASMAKCFATDSAMEVTTNAVQVLGGAGYVRDYPVERYMRDVKVA 362

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 363 QIFEGTNQIQRIVIGRAL 380


>gi|212212590|ref|YP_002303526.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212]
 gi|212011000|gb|ACJ18381.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212]
          Length = 387

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               E+ R A           P     D     P    L  +    G+     +  +   
Sbjct: 10  DETIEMLREAVQQFAS-EEIAPRAAFIDANNQFP--RDLWPKLGDLGVLGITVNEEYGGS 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T    K + PK+ + E+   
Sbjct: 67  QMGYLAHVIAMEEISRASGSVGLSYGAHSNLCVNQINRFGTETQKKRYLPKLINGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + ++  D         W  + P +D  I+ 
Sbjct: 124 ----------VGALAMSETEAGSDVVGMRLRAEQKGDIFILNGTKMWITNGPEADVVIVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+LN
Sbjct: 174 AKTDPGAGSRGITAFLIEKDFPGYRTAQKLHKLGMRGSDTCELVFDHCEVPKENILGELN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        L      +  M+  L   + Y   R      + +  +++  IAD+ 
Sbjct: 234 KGISVLMSGLDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +A S D  K  S++AA A +       +  + A  V  +A++C+GG+G
Sbjct: 294 TALNASRAYLYAIAQSADAGKIHSKDAASALM-------FAAENATQVAIQAIQCLGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R  R++    I  G+     + V   L +   
Sbjct: 347 YITEFPVERFLRDAKLYEIGAGTSEIRRIVVGRELFREGK 386


>gi|115359133|ref|YP_776271.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115284421|gb|ABI89937.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 377

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDHDAHLPD--AVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAGCATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    +     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 114 ---MAAGRIIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|260777481|ref|ZP_05886375.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607147|gb|EEX33421.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 367

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 136/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P   + D+    P  + L       GL     D  +        AH +    +   
Sbjct: 7   EHIAPIAAKVDEENQFP--NHLWSLMGEMGLLGVTIDEQYGGAAMGYLAHVVAMEEISRA 64

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +         + + PK+    Y                L ++
Sbjct: 65  SASVALSYGAHSNLCVNQIFRNGNAEQREKYLPKLIDGSY-------------IGALAMS 111

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +       +   + 
Sbjct: 112 EPNAGSDVVSMQLKAELSGDHYVLNGTKMWITNGPDADVLVVYAKTDPSAASRGITAFII 171

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  +K+G R + T EL F+N       +LG++N     +        +  
Sbjct: 172 ERDFEGFSHAQKLDKLGMRGSNTCELVFNNCKVPVENVLGEVNQGVKVLMSGLDYERVVL 231

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+     AA A  + +A + 
Sbjct: 232 AAGPLGIMQACLDLVVPYVHDRKQFGQSIGEFQLVQAKVADMYTRANAARAYVYTVAAAC 291

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 292 DRGETTRKDAAGA-------ILYSAELATQLALDAIQLLGGNGYINEFPAGRLLRDAKLY 344

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 345 EIGAGTSEIRRMLIGREL 362


>gi|115492645|ref|XP_001210950.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114197810|gb|EAU39510.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 439

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 141/384 (36%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        F          I A       
Sbjct: 78  EQIGPKVREMDEAETMD--PAIVEQLFEQGLMGIEIPEEFGGAGMNFTAGIVAIEELARI 135

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +   L     +V + W P++               T       L+
Sbjct: 136 DPSVSVLVDVHNTLVNTAFLKYGDAQVKRTWLPQL--------------ATGTVGSFCLS 181

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A +    G   +   + 
Sbjct: 182 EPASGSDAFALQTKAEKTADGYKINGSKMWITNSMEAGVFIVFANLNPSAGYKGITAFIV 241

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +    ++   N+     +  K  I  L+   
Sbjct: 242 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKANLLGEEGQGYKYAINLLNEGR 298

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  IA    +IAAA AL +  
Sbjct: 299 IGIAAQMTGLALGAWENAASYVWNDRKQFGQLIGNFQGMQHQIAQAYTEIAAARALVYNA 358

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V + A+E +GG G++ E    + +R+
Sbjct: 359 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVASSAVEWMGGMGFVREGIAEKMFRD 411

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 412 SKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|294651603|ref|ZP_06728908.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822512|gb|EFF81410.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 390

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 127/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGELGLLCTTMPEEYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNDEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLEGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNTEKGSANLSLIIVEADRAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGIGFMMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I              D       E +     A 
Sbjct: 278 TKDRKAFGKPIGTFQNTRFKLAELRTEIDFCRTY-------LDRCMELQLEESLGVDAAA 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 331 AAKYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIMKELISRTL 390


>gi|42781443|ref|NP_978690.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|42737365|gb|AAS41298.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
          Length = 569

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 152/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------VGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKQMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++ +      + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEIEIDVENVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|307202129|gb|EFN81629.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 131/369 (35%), Gaps = 15/369 (4%)

Query: 96  KVEFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           K E  P    + +   I DGL   ++D  F  +     +    +  ++   L    +   
Sbjct: 29  KEEITPLVRKMEKEQKIDDGLLKMLFDNGFMGLEIPTDYGGTGSN-FMSTILTVEEVAKV 87

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A++V +  T  +      K+ S E       P      A    LTE   G+D  A+
Sbjct: 88  DGAVAALVDIHNT--LVNSLIIKVASEE-QKRKYLPKLAQQCAGSFCLTEPGSGSDAFAL 144

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K            W  +S ++  F++ A  +   G   +     +    G+   +
Sbjct: 145 KTVAKKDGSDYVINGTKMWISNSDIAGIFLVFANADTNAGYRGITTFFVERDTPGMTVAK 204

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++K+G +++ T  + F N        LG                 +      +   +  
Sbjct: 205 PEDKLGIKASGTCMVHFDNVRVPESNILGQFGHGYKYAAGFLNEGRVGIGAQMIGIAQGC 264

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   I Y   R   G  +     M+  IA    D+  A  L +  A   D  K   +EAA
Sbjct: 265 LDATIPYTLERKQFGKDIFSFQSMQHQIAQAVTDVECARLLVYNAARLVDAKKDVMKEAA 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+++A        + A  V A+ ++ +GG G+  +    + +R++   +I  G+ N  +
Sbjct: 325 MAKLIA-------SETALRVTAKCIDFMGGVGFTTDFPQEKFFRDAKIGTIYEGTSNMQL 377

Query: 452 LDVLNLLEK 460
             +   + K
Sbjct: 378 STIAKCIRK 386


>gi|254720095|ref|ZP_05181906.1| hypothetical protein Bru83_11263 [Brucella sp. 83/13]
 gi|265985101|ref|ZP_06097836.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839066|ref|ZP_07471886.1| acyl-COA dehydrogenase [Brucella sp. NF 2653]
 gi|264663693|gb|EEZ33954.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306405889|gb|EFM62148.1| acyl-COA dehydrogenase [Brucella sp. NF 2653]
          Length = 597

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 195/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEASPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T    + + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKETYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|319760919|ref|YP_004124856.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822823|ref|YP_004386126.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115480|gb|ADU97968.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308195|gb|AEB82610.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 385

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 133/365 (36%), Gaps = 26/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++     GL        F  +      + R    L   A      + +     +  + +
Sbjct: 40  IVQEMRELGLFGMTIPEKFGGLELTMEEECRVLLELCQTAPAFRSVIGTTVGIGSQGILM 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W PK+ + E             V     LTE   G+D A++ +      D 
Sbjct: 100 DGTPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAILQGDH 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++P +  F ++A+      G   V   + D    G+ + +   K+G R 
Sbjct: 147 YVVNGTKRFITNAPHAGMFTLMARTNPQDKGAGGVSSFIVDAKSPGISFGKYDKKMGQRG 206

Query: 284 NATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N          L    G    MK+L    +  A ++V   +  L +A+ YA
Sbjct: 207 AHTCDVIFDNVKVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVAVGVAKRILRDALAYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD   ++ AA  ++   A   D+  + S E       A  
Sbjct: 267 LERKQFGQPICEFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTE-------ASC 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +M   V   A++ +GG+GY+ E  I R YR+     +  G+     + +   + 
Sbjct: 320 AKMFATEMCGRVADRAVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQIIIARNMV 379

Query: 460 KGTNL 464
           +    
Sbjct: 380 RAARA 384


>gi|167584606|ref|ZP_02376994.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 377

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/398 (19%), Positives = 140/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD+    P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDRDAHLPD--AVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKARWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
            A M          LTE + G++   + ++ + + DG + L+G K F+++       I+ 
Sbjct: 112 -ADMAAGRTIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AVTDPDAGKRGISAFLVPTDTPGFVVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 227 ARGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|52841104|ref|YP_094903.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296890|ref|YP_123259.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris]
 gi|52628215|gb|AAU26956.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750675|emb|CAH12082.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris]
          Length = 384

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 140/373 (37%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P     LR +   G+   +           +              +  
Sbjct: 26  PMADFWDEQGYFPI--ETLREAAQLGMAGMVVREDIGGAQLSRLDAALIFEQLATGCIPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     AS+V    +  + K W PK+ S E             V     LTE   G
Sbjct: 84  SAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLTEPESG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K     Y L+G K F+S   +SD ++ + +  G      +  LL + + 
Sbjct: 131 SDAASLKTRAVKEG-EYYVLNGAKAFISGGSVSDVYLCMVRT-GDESHHGISCLLIEKNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + +L+ K+G R+  T  L F N    +   +G+  +      +      ++ A  S
Sbjct: 189 PGLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIALNALNGGRVNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G    L  +  Y   R   G  L     ++   AD+  D  AA  + +R A + D   
Sbjct: 249 LGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAARLMVYRAAAAMDNDD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A +   + K     +A  +  +AM+  GG GY+ +  I R +R+   + IL 
Sbjct: 309 PN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQIERIFRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNL 457
           G+   M   +   
Sbjct: 363 GTNEIMREIIAKA 375


>gi|254242880|ref|ZP_04936202.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192]
 gi|126196258|gb|EAZ60321.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192]
          Length = 593

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/585 (16%), Positives = 195/585 (33%), Gaps = 76/585 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L   I  +    +S   A+ YAR R  S               +I  P 
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +        A          LA   ++ + RS+  A   ++ P+ K +     
Sbjct: 347 VRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                   +  GG GYI E    +  R+     I  G+     LD++   ++  G     
Sbjct: 407 LESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLS 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGM 522
                +      +  ++   +   ++       L + +  +         +A+  Y    
Sbjct: 467 IFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLF 526

Query: 523 NDIADVFLENRFL---------DNCHSTHCMLHGRFNAAHIIDSL 558
              A  +L  R           D       +   RF  A I+  +
Sbjct: 527 GYTAYAYLWARMAAAALRQREVDPAFHDGKLATARFYFARILPRV 571


>gi|332535048|ref|ZP_08410862.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035517|gb|EGI72012.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 391

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 129/358 (36%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L  +    G+                  H I    +   +        + S    + + 
Sbjct: 49  QLWTQMGEMGVLGMTVSEELGGAGLGYLEHVIAMEEISRASASIGLSYGAHSNLCVNQIN 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E+                L ++E   G+D+ ++  + +K  D
Sbjct: 109 RNGTQAQKEKYLPKLISGEH-------------IGALAMSEPNAGSDVVSMKLKAEKKGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +   ++ A+ +   G   +   + + +  G    +  +K+G R 
Sbjct: 156 KYILNGNKMWITNGPDAHTLVIYAKTDLNAGAKGITAFIVESNFPGFSTAQKLDKLGMRG 215

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F N        LG+LN     +        +  A   +  M+  +   + Y  
Sbjct: 216 SNTCELVFENCEVPEENILGNLNEGVKVLMSGLDYERVVLAAGPLGIMQACMDIVVPYIH 275

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    +++  +AD+   + AA +  + +A + D  ++  ++AA A       
Sbjct: 276 ERKQFDTPIGQFQLIQGKVADMYTQMNAARSYVYTVAKACDRGETTRKDAAGA------- 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  ++A  +  +A++ +GG+GYI E +  R  R++    I  G+     + +   L
Sbjct: 329 ILYAAELATKMALDAIQILGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 386


>gi|195160855|ref|XP_002021289.1| GL25250 [Drosophila persimilis]
 gi|198465055|ref|XP_001353478.2| GA17761 [Drosophila pseudoobscura pseudoobscura]
 gi|194118402|gb|EDW40445.1| GL25250 [Drosophila persimilis]
 gi|198149996|gb|EAL30989.2| GA17761 [Drosophila pseudoobscura pseudoobscura]
          Length = 415

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 114/302 (37%), Gaps = 30/302 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    + PK+                  A    LTE   G+D  ++ +  +K    
Sbjct: 134 FGNAEQKAKYLPKL--------------AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSH 179

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +S ++  F++ A  +   G   +   + D    GL   + ++K+G R++
Sbjct: 180 YVINGTKMWISNSDVAGVFLVFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRAS 239

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHY 338
            T  L F N       + N+        K    +L+   + +    V LA+      I Y
Sbjct: 240 GTCMLTFDNVRVP---EENILGTFGHGYKYAAGFLNEGRIGIGAQMVGLAQGTFDATIPY 296

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +   M+  IA IA +I AA  +++  A   ++     +EAA A     
Sbjct: 297 LLERKQFGESIYNFQSMQHQIATIATEIEAARLMTYNAARLQEQGVPFLKEAAMA----- 351

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K++  ++A     + ++ +GG G+  +    + YR+    +I  G+ N  +  +   +
Sbjct: 352 --KFYASEVAQRAAIKCIDWMGGVGFTRDFPQEKFYRDVKIGAIYEGTSNMQLSTIAKCV 409

Query: 459 EK 460
           +K
Sbjct: 410 KK 411


>gi|119774499|ref|YP_927239.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
 gi|119766999|gb|ABL99569.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 144/382 (37%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  E+ D+    P  + L  +    GL        +  V +   AH +    +   +   
Sbjct: 33  PLAEKVDRDNAFP--NELWAKFGDMGLLGVTVAEEYGGVNMGYLAHVVAMEEISRASASI 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIYRNGNEAQRAKYLPKLISGEH-------------IGALAMSEPNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++    +K  D         W  + P +  +++ A+ +   G   +   + +   
Sbjct: 138 GSDVVSMKLHARKEGDRYILNGNKMWITNGPDAHTYVIYAKTDLDKGPHGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    +  +K+G R + T EL F +       + N+  G    +K+L+  LD   + +S
Sbjct: 198 KGFSQAQKLDKLGMRGSNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLS 254

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +  A       Y   R   G  + +  +++  +AD+   + AA +  + +A + D
Sbjct: 255 GGPLGIMTACMDIVVPYVHERVQFGKSIGEFQLVQGKLADMYTGMNAAKSYVYNVARACD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  ++A  +  +A++ +GG+GY+ E +  R  R++    
Sbjct: 315 RGETTRKDAAG-------VILYAAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYE 367

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 368 IGAGTSEIRRMLIGRELFNETK 389


>gi|315925740|ref|ZP_07921948.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620983|gb|EFV00956.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 396

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 145/407 (35%), Gaps = 39/407 (9%)

Query: 63  EYVLSCTAQELA----RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           +++L+   ++L       A     P +      GE        P    + ++ +  G   
Sbjct: 16  DFILTAEQKDLVAVAKDFAERELAPVVEDCDAKGE-------FPM--DVYKKFVEQGFST 66

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                ++  +       +     +           + +    + + +  T    K +  +
Sbjct: 67  MFIPEAYGGIGAGALDLVLVNEQFAKVDAGFIVSATTAEFGVTPLRIAGTEEQIKYYFER 126

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236
           +   +                   LTE   G+D +A  +   +  D  Y L+G K F+S 
Sbjct: 127 VMDGQ--------------LGAFCLTEADAGSDASATRTTAVRDGDD-YILNGSKCFISS 171

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++D F + A  +   G   +   L +    G+   + +NK+G R + T  L F +   
Sbjct: 172 GGIADMFTVFAVTDKEKGAHGISCFLVEKEREGVGVGKEENKMGLRLSNTTSLSFDDVRV 231

Query: 297 FLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                +     G +  M+ L      ++   +     ++ EA  YA  R   G  +I   
Sbjct: 232 PAKNLIGEEGQGFMIAMQSLDRSRGVNSYGCLGIAERAIDEATKYAMVRRTFGKPIIKNQ 291

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+ +   AA  L +  A+  D      +   Y   +  +TK +   +A  V  
Sbjct: 292 GISFMLADMEIQTTAARTLLYHCADMID------KTGQYDTRLGSVTKTFVSDVAMKVTT 345

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++ +GG GY +E  + +  R++    I  G+     + +   +++
Sbjct: 346 DAVQILGGYGYSKEYPVEKLMRDAKIFQIFEGTNQIQRMVIGREMQR 392


>gi|242215320|ref|XP_002473476.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727377|gb|EED81297.1| predicted protein [Postia placenta Mad-698-R]
          Length = 424

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 133/390 (34%), Gaps = 32/390 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             +A  A           P     D+    P+   L  +    GL        +  +   
Sbjct: 52  DAVAEFAQREVA------PRAAEIDRSNNFPS--DLWEKLGSMGLLGITVSPQYGGLSLG 103

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H +    L   +   A    + S    + +    T    + + P + +         
Sbjct: 104 YFNHTLAMEELSRASGSVALSYGAHSNLCVNQIHRWGTDAQKEKYLPDLIAG-------- 155

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  + +K+  G        W  + P +   ++ A+ 
Sbjct: 156 -----KKVGSLAMSEPGSGSDVISMKLRAEKVDGGYKLNGNKFWITNGPTASTLVVYAKT 210

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
               G   +   + +    G    +  +K+G R + T EL F + F     +LG ++   
Sbjct: 211 SPDKGSRGITAFIIESGFAGFSTHQKLDKLGMRGSDTCELVFEDCFVPEESVLGPVDGGA 270

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +     L  L  +   +  M+ +   A+ Y   R   G  +    +M+  IAD+   +
Sbjct: 271 KVLMSGLDLERLVLSGGPLGLMQAAFDYAVEYVHERKQFGQPVGTFQLMQAKIADMYTKL 330

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A+ +  + +A + D  K    + A A         +    A  V  +AM+C+GG+GY  
Sbjct: 331 NASRSYVYAVAKACDAGKVSRRDCAGA-------ILYSSDRAVEVTIDAMQCLGGNGYTN 383

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E    R  R++    +  G+     + +  
Sbjct: 384 EYPTGRFLRDARLYCVGAGTQEIRRMLIGR 413


>gi|76811404|ref|YP_334354.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167739633|ref|ZP_02412407.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167825240|ref|ZP_02456711.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167903716|ref|ZP_02490921.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
 gi|217420548|ref|ZP_03452053.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|226197861|ref|ZP_03793435.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254192011|ref|ZP_04898511.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254261810|ref|ZP_04952864.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|76580857|gb|ABA50332.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|157987833|gb|EDO95598.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217395960|gb|EEC35977.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|225930049|gb|EEH26062.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254220499|gb|EET09883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 596

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L        G  + + L   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGA 478

Query: 479 SGKKVITILRDSIS 492
                 T ++  + 
Sbjct: 479 HDGPAFTAMKTQLE 492


>gi|332141156|ref|YP_004426894.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551178|gb|AEA97896.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 609

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/486 (18%), Positives = 171/486 (35%), Gaps = 56/486 (11%)

Query: 58  LELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDG 114
            E   E ++S    E A+ + N   P   +    G +W   +V     +    +  +  G
Sbjct: 30  FEEASEDLVSAIFAEAAKFSENTLAPINASGDEEGCKWVDGEVTTPKGFKEAYQTYVEGG 89

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                    F       +     A  +  A          S      +    T    K +
Sbjct: 90  WPSMSHPEEFGGQALPYSLSSIIAEWFSGANHSWAMYPGLSQGCMETLKAHGTELQQKMF 149

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             K+ S E+  T             + LTE   G+D+  +  + +   DG Y L+G K F
Sbjct: 150 LEKLVSGEWTGT-------------MCLTEAHCGSDLGMLKCRAEPQEDGSYSLTGTKIF 196

Query: 235 LSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRLKNK 278
           +S+   D       I+LA++         +  F+VP+       E    N +    +++K
Sbjct: 197 ISAGEHDMSENIVHIVLARLPDAPEGTKGISLFVVPKFNVSEEGEKQDRNAVACGSIEHK 256

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G +++AT  + F    GFL+G  N     +        + + +  ++    S   A+ Y
Sbjct: 257 MGIKASATCVINFDGAKGFLIGPPNRGLNCMFTFMNTARIGTGLEGLAASEASFQGALRY 316

Query: 339 ARRRHVS----GG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           A+ R       G          +I  P ++R +           AL+       D     
Sbjct: 317 AKDRIQFRSMTGRKNPDGPADPIIVHPDVRRMLLTQKAFAEGNRALAAYCMQMVDVTLYG 376

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             A  + E  A    + PI K +  + A    +  M+  GG G+I+E  + +  R++   
Sbjct: 377 DNAAEKQEAEAKLAFLTPIVKAFLTETAQESTSYGMQVYGGHGFIKEWGMEQLARDTRIC 436

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           ++  G+     +D+L     G+N   +L +   Q++    +     LRD+         L
Sbjct: 437 TMYEGTTGIQAVDLLGRKVMGSN--GELLNVFVQEV----RDYCNSLRDNAQFSAWTNAL 490

Query: 501 ARFLTE 506
           +  L E
Sbjct: 491 SSHLDE 496


>gi|260834039|ref|XP_002612019.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae]
 gi|229297392|gb|EEN68028.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae]
          Length = 411

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 139/379 (36%), Gaps = 31/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P     ++     GL       S             A           
Sbjct: 49  PIAGDLDKEHRFPT--EQVKMMGDLGLMAIDVPDSQGGTGLDYLAYAVALEEISRGCAST 106

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +     V   +T +  + +  + F               S      L+E   
Sbjct: 107 GCIMSVNNSLYLGPVKNWSTEQQQETFMHQDF------------LNGSKVGCFALSEPGN 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  +S  + A ++ A  +  +    +   L     
Sbjct: 155 GSDAGAASTVARLEGDHWVLNGTKAWITNSYEASATVVFATTDKGLKHKGISAFLVPMPT 214

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+ +T  L F +     +   N+   P    KI +  LD+  + ++
Sbjct: 215 EGLTLGKKEDKLGIRATSTAYLIFEDCK---IPKENLLGKPGMGFKIAMQTLDAGRIGIA 271

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A+ YA +R   G  +     ++  +AD+ + + +A  L+++ A   D
Sbjct: 272 SQGLGIAQAALELAVDYAMKREAFGSPIAKLQSVQNKLADMHMSVESARLLTWKAAAYKD 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+  +EAA A++ A     +C         + ++ +GG GY+ +    R+YR++    
Sbjct: 332 AGKNYIKEAAMAKLAASEAATFC-------AHQCIQVLGGMGYVTDMPAERYYRDARITE 384

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L K
Sbjct: 385 IYEGTSEVQRLVIAGRLLK 403


>gi|107103716|ref|ZP_01367634.1| hypothetical protein PaerPA_01004787 [Pseudomonas aeruginosa PACS2]
 gi|116052236|ref|YP_788920.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889472|ref|YP_002438336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|115587457|gb|ABJ13472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218769695|emb|CAW25455.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 593

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/578 (15%), Positives = 189/578 (32%), Gaps = 67/578 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L   I  +    +S   A+ YAR R  S               +I  P 
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +        A          LA   ++ + RS+  A   ++ P+ K +     
Sbjct: 347 VRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                   +  GG GYI E    +  R+     I  G+     LD++   ++  G     
Sbjct: 407 LESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLS 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGM 522
                +      +  ++   +   ++       L + +  +         +A+  Y    
Sbjct: 467 IFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLF 526

Query: 523 NDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
              A  +L  R                +        Y 
Sbjct: 527 GYTAYAYLWARMAAAALRQREADPAFHDGKLATARFYF 564


>gi|269925485|ref|YP_003322108.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789145|gb|ACZ41286.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 386

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 138/390 (35%), Gaps = 39/390 (10%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIR 136
           +   PQ+                PA   ++      G   +  +  +        ++ I 
Sbjct: 26  DRIRPQVLQNDREAR-------FPAG--IIEELGQLGFMGAPINPQYGGSGSDFLSYAIL 76

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              L  +       + + +  +A  +    T      +   + S                
Sbjct: 77  IEELSRVDPSIGTIVSAHTSLTAVPLQRWGTEEQKGKYLSLLASG-------------KT 123

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
                LTE   GTD A+I ++  +  D  +      W  ++  +  FI+ A+ + R    
Sbjct: 124 LGAFALTEPESGTDAASIQTRASRDGDHYFLTGTKVWITNASHAGLFIVFARTDNRGNHK 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + D    GL     ++K+G ++  +  +            L       +  KI +
Sbjct: 184 DISAFIVDRESPGLVVDPSESKLGIKAAHSCTVHLDGVKVSARDRLG---EEGQGFKIAM 240

Query: 317 Y-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD   + ++   V + +A       YA +R   G  + +   ++  IAD+A  + AA 
Sbjct: 241 QSLDGGRIGIAAQAVGIGQACLEMSIQYAVQRRQFGRPIAEFQAIQWKIADMATQVEAAR 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++R A   D+ ++ +  A+ A       K +  +M  +   EA++  G  GY  E  +
Sbjct: 301 LLTYRAAMLEDKGENITLAASMA-------KLFASEMCVSAAREAIQIHGSLGYSAEYPV 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + YR+S    I  G+  A  + + + L K
Sbjct: 354 EKFYRDSKVTEIYEGTSEAQRMVIASRLLK 383


>gi|193078459|gb|ABO13450.2| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 390

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRTGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      + K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|172063916|ref|YP_001811567.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171996433|gb|ACB67351.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 377

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDHDAHLPD--AVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    +     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 114 ---MAAGRIIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|329901359|ref|ZP_08272804.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327549140|gb|EGF33735.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 394

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 20/379 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH I    +   +   
Sbjct: 32  PRAGEIDRTDQFPM--DLWRKMGDLGVLGITVGEEYGGTGMGYLAHIIAMEEISRASASV 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +      + PK+ S EY                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIKRNGSAEQKAKYLPKLVSGEY-------------IGALAMSEPNA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +     D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 137 GSDVVSMKLRADWKGDRWVLNGTKMWITNGPDADVLVVYAKNDLEAGARGMTAFLIEKDF 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L      V  +   +  + A++S   
Sbjct: 197 KGFSVAQKLDKLGMRGSHTGELVFRDCEVPAENVLGGLGKGVNVLMSGLDYERAVLSGGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +  A+ Y   R   G  + +  +M+  +AD+   + A  A  + +  + D A 
Sbjct: 257 LGIMQACMDVAVPYVHDRKQFGQPIGEFQLMQGKLADMYSTMMACKAYVYAVGQACDRAA 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S  E     R  A     +  + A  +  E ++ +GG+GYI E    R +R++    I  
Sbjct: 317 S-PEAVRALRKDAAGAILYSAEKATWMAGETIQALGGNGYINEYPAGRLWRDAKLYEIGA 375

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 376 GTSEIRRMLIGRELFNETR 394


>gi|316934710|ref|YP_004109692.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602424|gb|ADU44959.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 379

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 144/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P    WD+    P    L  ++   GL    +   +      Q   I A   L   A   
Sbjct: 28  PFATEWDEAGGFP--RELYEKAAAIGLLGLGFPEEYGGTPCDQFMWIVATQELARAAAGG 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++     A  +A   +  +     P+I +                   L +TE  G
Sbjct: 86  VSASLNSHSIGAPPIARAGSAELKARVLPEILAG-------------KKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + ++  +  D  Y ++G K F++S M   +I  A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVSLLLIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL    LK K+G  ++ T  L F N        L     G +  M       L  A   
Sbjct: 192 PGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGFMIIMMNFNSERLTMAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  +V L EA  YA++R   G  L+   V++  + D+A  IAA+ A+   LA   D+ +
Sbjct: 251 IAASKVCLDEATAYAKQRVTFGKPLVKHQVIRHKLVDMAQKIAASQAMLELLAWRVDQGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   E    +  A  T  +C        +EA++  GG+GY+    + R YR+   N+I  
Sbjct: 311 SPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGYMRGVKVERIYRDVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|229133184|ref|ZP_04262017.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228650273|gb|EEL06275.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196]
          Length = 615

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 97  IENIEQHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 156

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 157 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 202

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      DG         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 203 ALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 258 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 317

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 318 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIH 377

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 378 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 437

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 438 RIFEGTNEINRLTVAKMLMKQIEQIEDAEVEIDVANVERNHRYILLAKKLLKQSLKTLSK 497

Query: 497 DKGL 500
             GL
Sbjct: 498 TPGL 501


>gi|296161567|ref|ZP_06844372.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295888211|gb|EFG68024.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 143/376 (38%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D  + +PA   ++ +    GL   I D  +  +        +         +  
Sbjct: 29  PYVHKFDHDDIYPA--EIVEKMKEMGLFGCIIDPEYGGLGLSTRTYAQIIARISRVWMSV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++  +  A +V    TP     + PK  + E+               G+GLTE   G
Sbjct: 87  SGIINSHLILAMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           TD+ AI +  +++ D         W  +S   +   +L + +   +     +  LL    
Sbjct: 134 TDLQAIRTTAKRVGDEYVVNGNKTWITNSKHGNTLALLVKTDTTAQPRHRGMSLLLVQKG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           P G    R   K+G +   T EL F++    T   + G        +     L  ++ A 
Sbjct: 194 P-GFEVSRQLEKLGYKGIDTCELSFNDYHVSTDALIGGVEGRGLQQILGGLELGRINVAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   + +L E++ Y+++R   G  + +   ++  + ++A  + A   L    A  +D 
Sbjct: 253 RGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQKYDR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P  +I
Sbjct: 313 GERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPLLTI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTNEMQRIIIAKQL 381


>gi|146338528|ref|YP_001203576.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191334|emb|CAL75339.1| isovaleryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 390

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 138/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P    L  +    GLH    +            H I    +   
Sbjct: 30  EQIAPRAADIDRSNQFP--RDLWPKLGELGLHGITVEEEHGGAGLGYLEHCIAMEEISRA 87

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +    + + PK+ S E+                L ++
Sbjct: 88  SASVGLSYGAHSNLCVNQIRRNGSEAQKRKYLPKLISGEH-------------VGSLAMS 134

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E + G+D+ ++ ++  +  D         W  + P+++  ++ A+ + + G   +   + 
Sbjct: 135 EPQAGSDVVSMKTRADRRGDRFVLNGNKMWITNGPVAETLVVYAKTDPQGGPRGITAFII 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F +        L      V  +   +  + A++
Sbjct: 195 EKGMKGFSTAQKLDKLGMRGSDTCELVFEDCEVPEENVLGQVGRGVNVLMSGLDYERAVL 254

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   +  M+  +   + Y   R   G  +    +++  +AD+   + AA A  + +A + 
Sbjct: 255 AAGPLGIMQACMDVVLPYVHERKQFGQPIGTFQLVQGKVADMYTTMNAARAYVYAVAKAC 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  E+AA A         +  + A     +A++ +GG+GYI + +  R  R++   
Sbjct: 315 DRGETTREDAAGA-------ILFAAEKATQCALDAIQLLGGNGYINDYATGRLLRDAKLY 367

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 368 EIGAGTSEIRRMLIGREL 385


>gi|118477758|ref|YP_894909.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|225864317|ref|YP_002749695.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|118416983|gb|ABK85402.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|225789193|gb|ACO29410.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
          Length = 569

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|77461387|ref|YP_350894.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77385390|gb|ABA76903.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 592

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/496 (18%), Positives = 174/496 (35%), Gaps = 56/496 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERW-DKVEFHPAWH-ALLR 108
            EL  L E V + T + +   A   T     P   A    G  W D     PA      +
Sbjct: 26  AELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAADEEGCHWADGAVTTPAGFPQAYQ 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      D ++  +   +A   +   +   A L  G     +  +   +    + 
Sbjct: 86  TYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNSASLSFGLYPMLTAGACLSINAHASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + P +++  +             A  + LTE   GTD+  I ++ +  +DG Y +
Sbjct: 146 ELKAAYLPNMYAGVW-------------AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKV 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA++         +  FLVP+ + +     G+ N    
Sbjct: 193 SGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGARNPANC 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S 
Sbjct: 253 GSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGVGIQGLATGERSY 312

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             AI YAR R  S               +I  P ++R +  +        A S  +A   
Sbjct: 313 QNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEGGRAFSTYVAMQL 372

Query: 381 D------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D      +A +R        ++ P+ K +   +         +  GG GYI E    +  
Sbjct: 373 DTAKFSEDAATRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGHGYIREWGQEQLV 432

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R+     I  G+     LD++   ++  G   ++     +     ++   +    +    
Sbjct: 433 RDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATASADLGEFTKPLND 492

Query: 493 LCKEDKGLARFLTEKI 508
                  L  +L ++ 
Sbjct: 493 AVDTLDELTSWLLDRA 508


>gi|229017657|ref|ZP_04174549.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
 gi|228743640|gb|EEL93748.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273]
          Length = 615

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 78/427 (18%), Positives = 160/427 (37%), Gaps = 42/427 (9%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 97  IENIEQHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 156

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 157 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 202

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      DG         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 203 ALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 258 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 317

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 318 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIH 377

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 378 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 437

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK-------VITILRDSISL 493
            I  G+     L V  +L K    FEQ+   + +   S+ ++          +L+ S+  
Sbjct: 438 RIFEGTNEINRLTVAKMLMKQ---FEQIEDHVVESEISNVERNHRYILLAKKLLKQSLKT 494

Query: 494 CKEDKGL 500
             +  GL
Sbjct: 495 LSKTPGL 501


>gi|148547500|ref|YP_001267602.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511558|gb|ABQ78418.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 383

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 139/378 (36%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  + W+K    H     ++R+    GL   +    F            A          
Sbjct: 27  PHAQAWEKAGWIHDG---VVRKMGELGLLGMVVPEDFGGSYTDYVAYALAVEEIAAGCGA 83

Query: 148 AGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            G +MS   +      L   T    + W P++ S E             V     LTE +
Sbjct: 84  TGAMMSIHNSVGCGPLLAYGTADQQQQWLPRLASGE-------------VIGCFCLTEPQ 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDG 265
            G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G   +   L   
Sbjct: 131 AGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVPT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAI 322
              G    R ++K+G R++ T  + F N        L     G    +  L    +  A 
Sbjct: 190 DNPGFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGGRIGIAA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L    A     
Sbjct: 250 QALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLLILHAARLRSA 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    E       A   K +  +MA  V + A++  GG GY+E+  + R+YR++    I
Sbjct: 310 GKPCLSE-------ASQAKLFASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQI 362

Query: 443 LLGSGNAMVLDVLNLLEK 460
             GS     + +   L+ 
Sbjct: 363 YEGSSEIQRMLIARELKN 380


>gi|256788690|ref|ZP_05527121.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772585|ref|ZP_06531963.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289702784|gb|EFD70213.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 383

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 134/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E      +L+++    G      D  +                        
Sbjct: 26  PHVVEWDRAEEVD--RSLVKKLGEVGFLGLTIDEEYGGSGGDHLAYCLVTEELGRGDSSV 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S S+   A  +A        + W P + S EY                 GLTE   
Sbjct: 84  RGIVSVSLGLVAKTIAAWGDEEQKRRWLPGLTSGEY-------------VGCFGLTEPGT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D   +T++  +  D         +  +   +D  ++ A+     G   V   L     
Sbjct: 131 GSDAGNLTTRAVRDGDDYVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPTDT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDSAIMS 324
            GL  + +  K+G R  AT EL   +        L     G    M  L    +  A   
Sbjct: 191 PGLTRRTIHGKLGLRGQATAELVLEDVRVPASAMLAPEGKGFSVAMSALAKGRMSVAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ YA  R   G  +    +++  I+DIALD+ AA  L++R+A+  D  +
Sbjct: 251 VGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVADLIDRGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E++ A       K +  + A      A++  GG GYI+E    +  R++   ++  
Sbjct: 311 PFAVESSKA-------KLFASEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYE 363

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   L
Sbjct: 364 GTSQIQKLVIGRAL 377


>gi|145593492|ref|YP_001157789.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302829|gb|ABP53411.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 387

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 128/377 (33%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+  EF  A    LR +     H       +          +        A   
Sbjct: 33  PHAAEADETGEFPKASFDALRAA---DFHAPHIPAEYGGADADALATVIVIEEVARACAS 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      + L  +  + + +               P+          L+E   
Sbjct: 90  SSLIPAVNKLGTMPLILAGSAELRRKYL-------------TPVAAGDAMFSYCLSEPEA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA+T++  +  D        +W  ++ +S+ + + A  +       +   + + S 
Sbjct: 137 GSDAAAMTTRAVRDGDHWVLNGVKRWITNAGVSEFYTVFAVTDPTARSRGISAFVVEKSD 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ +   + K+G + + T E+            +    TG    M+ L    +  A  +
Sbjct: 197 PGVSFGAPEKKLGIKGSPTCEVYLDGVRIPADRMIGAEGTGFATAMQTLDHTRITIAAQA 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y + R   G  + D   ++  +AD+ + + AA  L++  A   +   
Sbjct: 257 VGIAQGALDYAKGYVQERRQFGKPVADFQGIQFMLADMGMKLEAARQLTYAAAARSERGD 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                 A         K +    A  +   A++ +GG GY  +  + R  R++    I  
Sbjct: 317 ------ADLTYFGAAAKCFASDAAMEITTNAVQLLGGYGYTRDYPVERMMRDAKITQIYE 370

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+     + +   L KG
Sbjct: 371 GTNQVQRIVIARQLLKG 387


>gi|13471277|ref|NP_102846.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14022021|dbj|BAB48632.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 388

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 143/397 (36%), Gaps = 36/397 (9%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+A+   A+   P           WD+ +  PA   ++R +   GL          
Sbjct: 19  RAIQEMAQAFAADRVAP-------NALDWDRRKHFPA--DVIRETGPLGLGGIYVRDDVG 69

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +   +        A       +S     ASM+         + + PK+ S E+  
Sbjct: 70  GSALGRLDAVLIFEALSHADPGFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEW-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
                           LTE   G+D AA+ ++  K   G Y L+G K F+S    SD + 
Sbjct: 128 -----------LASYCLTEPGSGSDAAALKTRAVKSG-GDYVLNGAKQFISGAGDSDVYA 175

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---D 301
           ++ +  G  G   +  ++      GL +   ++K+G    +T ++ F +           
Sbjct: 176 VMVRT-GADGPKGISTIVVPKDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSG 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                G          L+ A  S+ G + +L +A+ Y   R   G  +     ++  +AD
Sbjct: 235 EGAGFGIAMAGLDGGRLNIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ AA    +  A+  D           A   + + K +       V   A++ +GG
Sbjct: 295 METELQAARIFLYAAASKLDRKAPD------AGKWSAMAKRFVTDTGFNVANNALQLLGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ +  I +  R+   + IL G+   M + +   L
Sbjct: 349 YGYLHDYGIEKLVRDLRVHQILEGTNEIMRVIIARAL 385


>gi|313125944|ref|YP_004036214.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312292309|gb|ADQ66769.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 381

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 129/399 (32%), Gaps = 30/399 (7%)

Query: 63  EYVLSCTAQE--LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
               S    E    R             P     D+ E  P    +        L     
Sbjct: 4   ADAGSALTDEQRAIRDVVREFAV-EEIRPTAREADETESFPE--DVWDGLAELDLTGLTV 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +      +             QL     +S    + S +A   +    + W P+   
Sbjct: 61  PEEYGGFDADRMTYTVVNEQVAYGQLAVATALSVHCLATSCIAKFGSDEQKEAWLPE--- 117

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                     M +        L+E   G++ A +++  ++  D        +W  +    
Sbjct: 118 ----------MARGRPVGMFALSEPDAGSNPAEMSTVARREGDEYVINGKKQWITNGQRG 167

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  I+ A+ +       V + L      G+   + ++K+G R++ T  L F +       
Sbjct: 168 DVCILFAKTDPDDPSS-VTQFLVPKDA-GIEVGKKEHKLGLRASDTTSLIFDDVHIPAEN 225

Query: 301 DL-NVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G     +IL    +  A  +V   + +  EA  YA  R   GG + D   ++ 
Sbjct: 226 RLTEEGKGLSAAFRILTGGRMGIAAQAVGLAQSAFDEAREYAHDREQFGGPISDIQAVRH 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             +++A  I A+  +    A   D  +     A+ A       KY+  + A  V  EA++
Sbjct: 286 KFSEMATQIHASRLMVREAARQDDAGEDPRIAASMA-------KYFASEAAVDVTNEAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY  +  + R YR+S   +I  G+       +  
Sbjct: 339 IHGGYGYTTDFEVERMYRDSKITTIYEGTSEIQKEVIAR 377


>gi|218532360|ref|YP_002423176.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|218524663|gb|ACK85248.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 587

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 94/498 (18%), Positives = 191/498 (38%), Gaps = 46/498 (9%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAW 103
           +A   +V+ +    +G        +E  R+A      L+      G  +   +V   P W
Sbjct: 17  VAGLDAVLAQGGAEIGPDDAVAILEEAGRLAGNVIAPLNRVGDRHGTPFSDGRVTTAPGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +  R  +  G +  +    +        H I AA   +         + P +T+  + A
Sbjct: 77  ASAYRTFVEGGWNGVLAAPDYGGQGLP--HLIAAACTEMWNGANLAFGLCPLLTAGGVEA 134

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    +  +   +  K+ S E+                + LTE + G+D++A+ ++ +  
Sbjct: 135 LAAHGSDELKGRYLEKLVSGEW-------------TATMNLTEPQAGSDLSALRTRAEAQ 181

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            DG Y ++G K +++    D       ++LA+++        +  FLVP++L DGS N L
Sbjct: 182 GDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPAGTRGISLFLVPKVLPDGSRNDL 241

Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G  ++ T  + F +     G+L+G+ N     +  M     L+  +  V  
Sbjct: 242 RCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRGLACMFTMMNSARLNVGLQGVGV 301

Query: 328 MRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YAR R              ++    ++R +  +    AA+  + +  A  
Sbjct: 302 AEAAYQKALDYARERRQGRAPGTPEPVSAIVAHADIQRTLLTMKAYTAASRGICYLTAQG 361

Query: 380 FDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D A     +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++
Sbjct: 362 LDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLGVQVHGGMGFVEETGAAQLMRDA 421

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               I  G+       L    L   G        +++ +      K        + +  +
Sbjct: 422 RILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIASMRRVAEGLLKDGAPGFGHAAARLR 481

Query: 496 EDKGLARFLTEKIALASS 513
           E  G     T  +  A +
Sbjct: 482 EGIGSLDRATSFLLKALA 499


>gi|302185797|ref|ZP_07262470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 601

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEAVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|269128562|ref|YP_003301932.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313520|gb|ACY99894.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 418

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 148/372 (39%), Gaps = 27/372 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R +++E   A    LR++  + GL        +  +    + ++R A     A      +
Sbjct: 65  REEEIEETDAIPESLRQAAREMGLFGYALPEEYGGLGLSLSEEVRLAFELGYASPAFRSM 124

Query: 152 MSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              S   +  ++    T    + W P++ S E             V     LTE   G+D
Sbjct: 125 FGTSNGIAGQVLVNAGTEEQKRQWLPRLASGE-------------VIGAFALTEAEAGSD 171

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            + +++   K  DG Y ++G K F+++ P +D F++ A+  G  G   +   L +    G
Sbjct: 172 PSTLSTTAVKDDDGNYVINGAKRFITNAPEADVFMVFART-GGPGSRGISTFLVERDAPG 230

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVS 326
           L       K+G R   T E+ F N        +    TG    M  L    L  A + V 
Sbjct: 231 LKVGPPDEKMGQRGAHTAEVFFDNVRVPASAMVGPEGTGFRTAMASLAHGRLSIAAVCVG 290

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  L E + YA+ R   G  + +  +++  IAD   ++ A  A+    A ++D  + R
Sbjct: 291 LAQRILDETVAYAKERAQGGRKIGEYQLVQGMIADSQAELYAGRAMVLEAARAYDAGEDR 350

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                  ++     KY+C +M   V   A++  GG GY+   ++ R YR++    I  G+
Sbjct: 351 -------KLGPSCAKYFCSEMLGRVADRAVQVFGGMGYMRGVAVERFYRDARLFRIYEGT 403

Query: 447 GNAMVLDVLNLL 458
                L +   L
Sbjct: 404 SQIQQLVIAKRL 415


>gi|190572315|ref|YP_001970160.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010237|emb|CAQ43845.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 387

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 134/358 (37%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           AL  +    GL     + ++        AH +    +   +        + S    + + 
Sbjct: 45  ALWPKLGEQGLLGLTVEEAYGGTGMGYLAHVVAMEEISRASGGIGLSYGAHSNLCVNQLR 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + P +                S+   L ++E   G+D+ ++  +  K  D
Sbjct: 105 KNGNEEQKQRFLPGLCDG-------------SLVGALAMSEPGAGSDVVSMKLRADKRGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   L +    G    +  +K+G RS
Sbjct: 152 RYVLNGNKMWITNGPDADVLVVYAKTDMDAGAKGITAFLVEKGMKGFSTSQKLDKLGMRS 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L    G V  +   +  +  ++S   +  M  ++   + Y  
Sbjct: 212 SPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDYERVVLSGGPLGLMAAAMDVVMPYVH 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            RH  G  +    +++  IAD+ + + A  A  + +A + D+ ++  ++AA A       
Sbjct: 272 ERHQFGEAIGSFQLIQAKIADMYVGLGACRAYVYAVARACDQGRTTRQDAAGA------- 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + A  +  +A++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 325 ILYAAEKATWLTGQAIQILGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|182678727|ref|YP_001832873.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182634610|gb|ACB95384.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 594

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/520 (17%), Positives = 176/520 (33%), Gaps = 63/520 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E AR        L+      G  +D   V     +    +     G      
Sbjct: 36  DLIDSVLEEAARFCEQVLFPLNRSGDEEGCVFDSGVVRTPKGFQEAYKAFCEAGWPGITS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             ++      +        +   + L  G     S  +   +    +  +   + PK+  
Sbjct: 96  SPAYGGQGLPKIVNSLIEEMICSSNLSFGLYPGLSHGACVALESHGSEELKDKYLPKLVE 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   GTD+    ++     DG Y ++G K F+S+   
Sbjct: 156 GTWSGT-------------MCLTEPHCGTDLGLSRTKAVPAEDGTYRITGTKIFISAGEH 202

Query: 241 DA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+         G+ NG+    +++K+G +++
Sbjct: 203 DLTENILHLVLARLPDAPKGIKGISLFLVPKFFVHDDNTLGARNGVSCGSIEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ +     +  M     L   +  +    VS   A+ YAR R  
Sbjct: 263 ATCVINFDEATGWLVGEPHKGMRAMFTMMNTERLAVGLQGLGIAEVSYQGAVAYARERLQ 322

Query: 345 SGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386
            G               +I  P ++R +           A     A   D     +A  R
Sbjct: 323 -GRSLTGAKYPDKPADPIIVHPDIRRMLLTQRAYAEGCRAFGIWAAKHLDLRNHPDATVR 381

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E   +  ++ P+ K     +        M+  GG GYI E  + ++ R+     I  G+
Sbjct: 382 QEAEEFVALVTPVVKALFTDLGSEAANLGMQVFGGHGYIREHGMEQYARDVRIAQIYEGT 441

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTL-----EQDLGSSGKKVITILRDSISLCKED-- 497
                LD +   L      L  + F  +     E+   ++  + I  L  + +  ++   
Sbjct: 442 NGVQALDFVGRKLPADMGRLLRRFFHPVAAYIEEKSSETTLTEFIDPLNKAFTRLQQATI 501

Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
               A       A A++   L   G+  +A ++   R  +
Sbjct: 502 KIAQAGLRNPDEAGAAATDYLRLFGLTALAYLW--ARMAE 539


>gi|76801583|ref|YP_326591.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160]
 gi|76557448|emb|CAI49026.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160]
          Length = 374

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 127/369 (34%), Gaps = 27/369 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK +  P    +        L        +      +              L     +S 
Sbjct: 30  DKAQAFPE--DIWDALAELDLTGLTVPERYGGFDADEVTYSIVNEELARGHLAVATALSV 87

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              + S +    +      W  ++                       L+E   G++ A +
Sbjct: 88  HGLATSCIRQFGSAEQQDRWLSEMVDG-------------RPVGAFALSEPDAGSNPAEM 134

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           +++  K  D        +W  +   S   I+ A+ + R     V + L      GL   +
Sbjct: 135 STEAVKDGDEYVINGKKQWITNGERSGVVILFAKTD-RDDPNTVTQFLVPKDVEGLEVGK 193

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            ++K+G R++ T  L F +        L  V  G      IL    +  A  +V   + +
Sbjct: 194 KEDKLGLRASDTTTLLFDDVRIPAENRLTEVGDGLQAAFSILTGGRIAIAAQAVGLAQAA 253

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA  R   G  LI+   +   +AD+  DI AA  L+   A   +          
Sbjct: 254 LDDAVEYANDREQFGKPLIEHQAIAHKLADMQTDIQAARLLTRDAARKNETGVD------ 307

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + KY+  + A  V  EA++  GG GY ++  + R+YR++   +I  G+     
Sbjct: 308 --PKAASMAKYFASETAVDVANEAVQVHGGYGYTKDFDVERYYRDAKITTIYEGTSEIQK 365

Query: 452 LDVLNLLEK 460
             +   L++
Sbjct: 366 KVIARHLKQ 374


>gi|239816229|ref|YP_002945139.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802806|gb|ACS19873.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 384

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 131/402 (32%), Gaps = 33/402 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS      A+ A         + P   RWD     P     + ++   G           
Sbjct: 5   LSEEQNAFAQTARDFA--QAEFAPHAARWDAEAIFP--KEAIAKAGELGFCGLYAPERIG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +   +                    ++    +  M+    T  V + W   + S     
Sbjct: 61  GLGLPRLDSALVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVAQQWGEDLTSG---- 116

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           LTE   G+D  ++ ++ +          G  +   +  +D  ++
Sbjct: 117 ---------RKLASYCLTEPGAGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVL 167

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +A+     G   +          G+ Y + ++K+G  S  T  + F N         N+ 
Sbjct: 168 MARTG-GGGAGGISAFAVPADAPGVSYGKKEHKMGWNSQPTRTINFDNVRVPA---ENLL 223

Query: 306 TGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               E  +I +       ++ A  SV   + +L  A  Y   R   G  +     ++  +
Sbjct: 224 GKEGEGFRIAMKGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPIASFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ AA  +    A+  D         A A     + K +       V  +A++  
Sbjct: 284 ADMATELVAARQMVRLAASKLDAGH------ADASTYCAMAKRFATDAGFNVCNDALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY+ E  + R  R++  + IL G+   M + V   L +G
Sbjct: 338 GGYGYLSEFPLERLVRDTRVHQILEGTNEIMRVIVARKLLEG 379


>gi|302342718|ref|YP_003807247.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639331|gb|ADK84653.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 134/371 (36%), Gaps = 33/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+R D+    PA   +L R    G    +    +        ++ +  A +       A 
Sbjct: 30  GQR-DREGRFPA--DMLARMAELGFLGMMVPEEYGGAGVDAVSYVLALAEIAYGCASTAV 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   +      +    +    + W P             PM    V    GLTE   G+
Sbjct: 87  VMSVHNSICCEAMVKFGSEEQKRQWLP-------------PMCDGRVIGAFGLTEPGAGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D +   +   +  D        ++  +   +   I+ A  +       V   L      G
Sbjct: 134 DPSGQITTAVRDGDYWVLSGVKQFITTGSNAGLTIVTAYTDKSKKHRGVSAFLVPKGSPG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG- 327
           L   + ++K+G +++ TV+L   +        L       E  ++ +  LD+  + ++  
Sbjct: 194 LVVGKAEDKLGLKASDTVQLILEDCRVPAANMLGREG---EGFRVAMTCLDAGRIGIAAQ 250

Query: 328 ----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R  L EA+ +   R   G  +     ++  IAD+A +I AA  L    A    + 
Sbjct: 251 SLGVARACLDEAVTFIDSREQFGRAISQFQGVRWRIADMATEIEAAELLCVNAALLKAQG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EA+ A       K +  +M   + ++ ++  GG G+ +E  I RH+R++   +I 
Sbjct: 311 QRFTAEASMA-------KLFASEMVNRITSQCLQLHGGYGFCKEYDIERHFRDARVFTIY 363

Query: 444 LGSGNAMVLDV 454
            G+     + +
Sbjct: 364 EGTSEIQRVVI 374


>gi|316932355|ref|YP_004107337.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600069|gb|ADU42604.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 596

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/455 (20%), Positives = 165/455 (36%), Gaps = 59/455 (12%)

Query: 69  TAQELARMANYNTPQLHAYGPGG-------ERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
              E AR++      LH     G            V     +    R+    G       
Sbjct: 41  IINEAARLSEE---VLHPLNAVGDHEGCKRNDDGSVTTPKGFKDAYRQIAEGGWMGLSSP 97

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +                   A +        ++ +A+ + +  +P   + + PK+ S 
Sbjct: 98  AEYGGQGLPITLTQTVQEFLNSANMAFAMYPGLTMGAAAALTVHGSPEQKQTYLPKMVSG 157

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+  T             + LTE + GTD+  + ++  K +DG Y ++G K F+S+   D
Sbjct: 158 EWTGT-------------MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHD 204

Query: 242 A-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++EG       +  F+VP+ L +     G+ NG+    +++K+G   NA
Sbjct: 205 MADNIIHLVLARIEGAPAGIKGISLFVVPKFLVNPDGTVGTRNGVICGSIEHKMGIHGNA 264

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + +    G+L+G+ N     +  M     L  A+  ++   V+   A+ YAR R   
Sbjct: 265 TCTMNYDGATGWLVGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVEYARERLQG 324

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRS 387
                          +I  P ++RA+  +     AA AL    A   D      +AK R 
Sbjct: 325 RALSGPKATDKPADPIIVHPDIRRALLTMRAFNEAARALVLWTALKSDVAHRSSDAKERQ 384

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
               +  +M P+ K        A    A +  GG GYI    + +  R++    I  G+ 
Sbjct: 385 SADDHLGLMTPVLKGVLTDGGFANAVAAQQVYGGHGYIAANGVEQFVRDARIAMIYEGAN 444

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG 480
               LD++   L   G       F+ +       G
Sbjct: 445 GIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHG 479


>gi|15964287|ref|NP_384640.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307307024|ref|ZP_07586763.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15073464|emb|CAC45106.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306901964|gb|EFN32563.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 598

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/542 (19%), Positives = 191/542 (35%), Gaps = 90/542 (16%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            + +    E A++A     P   +    G        V     +          G     
Sbjct: 36  DMTAAILGEAAKLAEEVLFPINLSGDQEGCKRHEDGSVTVPKGFKEAYDLYREGGWLGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               F        + +  A    M+      +M P +T  ++ A+    +    + + PK
Sbjct: 96  APEEFGGQGLP--YTLHTAVGEFMSAANMSLMMYPGLTQGAIAAILVHGSEEQKRAYLPK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   GTD+  + ++     DG Y +SG K F+S+
Sbjct: 154 MVDGTWTGT-------------MNLTEPHCGTDLGLLRTKAVPNGDGSYRISGQKIFISA 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGN 281
              D       ++LA++EG       +  F+VP+       E G  NG+    +++K+G 
Sbjct: 201 GEHDMAENVVHLVLARIEGAPDGVKGISLFIVPKFKLDASGEPGERNGVSCGAIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + +    G+L+G  N     +  M     L   +  +S   V+   A  YAR 
Sbjct: 261 HGNATCVMNYDEATGYLIGTENKGLSAMFVMMNEARLAVGMQGLSIAEVAYQNAASYARE 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEA 383
           R                  +I  P ++R +  I        A +        +A+  D  
Sbjct: 321 RIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSE 380

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R        +M PI K             A +  GG GYIEE  ++++ R++    I 
Sbjct: 381 EERQTADDILSLMTPILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIY 440

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     LD++                  +   + G+ V+ + ++    C+E++G    
Sbjct: 441 EGANGIQALDLVG----------------RKLAMNGGRAVMALFKEIGDFCEENRG---- 480

Query: 504 LTEKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAHIIDSL 558
             EK++  + A    + G+ND+      F++N     DN         G  +  H+   +
Sbjct: 481 -DEKLSGYTKA---LKKGLNDLQAATMWFMQNAMAKPDNAG------AGSTDYMHLFGLV 530

Query: 559 YL 560
            L
Sbjct: 531 VL 532


>gi|212640302|ref|YP_002316822.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212561782|gb|ACJ34837.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 594

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/447 (19%), Positives = 168/447 (37%), Gaps = 60/447 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           ALL+++   GL  +     +  +   +      A     A   +    +     +  + L
Sbjct: 66  ALLKQAGELGLLGADVPEEYGGLSLDKISSALIAEKMARAGGFSISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQKYLPALATGE-------------KIAAYALTEPGSGSDALGAKTTAKLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNAGFADVFVVYAKVDGEH----FSAFIVERDFPGVSTGAEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G +    IL        + +V G + +L   I YA
Sbjct: 229 SSSTRTLILQDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGAVGGAKRALEVTIQYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------------EAKSRS 387
            +R      +    + +  +A +A  + AA +  +R    F+            + K  +
Sbjct: 289 NQRQQFKTPISKFTLTQEKLATMASKLYAAESSVYRTVGLFEARMGQLTDEQAKDGKETA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K +  +M   ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KAIAEYAIECSLNKVFATEMLDYIVDEGVQIHGGYGFMQEYEIERMYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L LL+K   L E+L   + +++G               + +
Sbjct: 409 EINRLLVPGMYLRKAMKGELPLLQKAQQLQEELMMLMPEEVGD-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAGM 522
           ++K L R   +KIAL  +  A  + G 
Sbjct: 456 QEKYLVRH-AKKIALMVAGLAAQKFGP 481


>gi|254707856|ref|ZP_05169684.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|261315345|ref|ZP_05954542.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261304371|gb|EEY07868.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
          Length = 571

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|240171199|ref|ZP_04749858.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 135/373 (36%), Gaps = 35/373 (9%)

Query: 99  FHPAWHAL-------LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA--QLEAG 149
           +H  W           + +   G         +                   A      G
Sbjct: 34  YHDEWEKAKIVDRGVWQEAGKQGFLGMAVPEEYGGGGNPDFRYNTIITEETSAGRYSGIG 93

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +   V +  ++AL TT    + W PK  S E             +   + +TE   G+
Sbjct: 94  FGLHNDVVAPYLLAL-TTEEQKQRWLPKFCSGE-------------LITAIAMTEPGTGS 139

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+ +    
Sbjct: 140 DLQGIKTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLVVERGMQ 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G    R  +KIG  +  T EL F++        L     G +  M+ L    +  AIM+ 
Sbjct: 199 GFERGRHLDKIGLDAQDTAELSFTDVKVPAENLLGEEGMGFIYLMQNLPQERISIAIMAA 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +GM   L + + Y R R   G  +      +  +A++A +      +         E K 
Sbjct: 259 AGMEAVLEQTLQYVRERKAFGKPIGSFQNNRFVLAELATEATVVRIMVDEFIALHLEGKL 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E+AA A+        +  +    +    ++  GG GY+ E  +AR Y ++   +I  G
Sbjct: 319 TVEQAAMAKW-------YSTEKQVYLNDRCLQLHGGYGYMREYPVARAYLDARVQTIYGG 371

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   L
Sbjct: 372 TTEIMKEIIGRGL 384


>gi|194363976|ref|YP_002026586.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346780|gb|ACF49903.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 387

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 134/358 (37%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           AL  +    GL     +  +        AH +    +   +        + S    + + 
Sbjct: 45  ALWPKLGEQGLLGLTVEEEYGGTGMGYLAHVVAMEEISRASGGIGLSYGAHSNLCVNQLR 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + P + S              ++   L ++E   G+D+ ++  +  K  D
Sbjct: 105 KNGNEEQKQRFLPGLCSG-------------ALVGALAMSEPGAGSDVVSMKLRADKRGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   L +    G    +  +K+G RS
Sbjct: 152 RYVLNGNKMWITNGPDADVLVVYAKTDMAAGAKGITAFLVEKGMKGFSTAQKLDKLGMRS 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L    G V  +   +  +  ++S   +  M  ++   + Y  
Sbjct: 212 SPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDYERVVLSGGPLGLMAAAMDVVMPYVH 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            RH  G  +    +++  IAD+ + + A  A  + +A + D+ ++  ++AA A       
Sbjct: 272 ERHQFGEAIGSFQLIQAKIADMYVGLGACRAYVYAVARACDQGRTTRQDAAGA------- 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + A  +  +A++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 325 ILYAAEKATWLTGQAIQILGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|56697631|ref|YP_168001.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56679368|gb|AAV96034.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 387

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 141/398 (35%), Gaps = 31/398 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    P  + L R     GL        F  
Sbjct: 9   DLGEDVNALRDMVHRWAQERVRPMAAEIDQTNEFP--NELWREMGDLGLLGITVPEEFGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L       + + P + S E+  
Sbjct: 67  AGMSYLAHVVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNDEQKRKYLPGLVSGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + S  G    +  +K+G R + T EL F +       +LG  
Sbjct: 174 YAKTDPEAGSKGITAFLIEKSMKGFSTSKHFDKMGMRGSNTAELVFEDVEVPFENVLGQE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GRGVAVLMSGLDYERVVLAGIGTGIMAACLDEIMPYMAERKQFGKPIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYIYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G++ + +++R +R++    I  G+     + +   L  
Sbjct: 347 GFLSDSAVSRIFRDAKLMEIGAGTSEIRRMLIGRELMN 384


>gi|326332365|ref|ZP_08198644.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325949854|gb|EGD41915.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 390

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 124/371 (33%), Gaps = 24/371 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+   +P         +           ++  V       +        A + A  + +
Sbjct: 36  VDEEARYP--QEAHDALVETEFFAPHVPEAYGGVGADALATVLVIEEIARADVSASLIPA 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  V +  +  + K +                +          L+E   G+D A 
Sbjct: 94  VNKLGSLPVQIGGSEELKKKYL-------------GALAAGQGNFSYCLSEPDAGSDAAN 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             ++  +  D        +W  ++ +S  + +LA  +       +   + + S  G+ + 
Sbjct: 141 QKTRAVRDGDFWVLNGVKRWITNAGVSGYYTVLAVTDPEKRSKGISAFVVEKSDEGVSFG 200

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             + K+G + + T E+ F N       L+G+                +  A  +V   + 
Sbjct: 201 APEKKLGIKGSPTREVYFDNVRIPADRLIGEEGKGFTYAMQTLDHTRITIAAQAVGVAQG 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ Y + R   G  + +   ++  +AD+ + I AA  L++  A   +         
Sbjct: 261 ALDYALGYIKERKQFGKPIAEFQGVEFMVADMGMKIEAARQLTYAAAGRSERGDKD---- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                     K +   +A  V  +A++ +GG G+  +  + R  R++    I  G+    
Sbjct: 317 --LTFFGAAAKAFASDVAMQVTTDAVQLLGGYGFTRDYPVERMMRDAKITQIYEGTNQVQ 374

Query: 451 VLDVLNLLEKG 461
            + +   L  G
Sbjct: 375 RIVMARQLLAG 385


>gi|313109647|ref|ZP_07795591.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310882093|gb|EFQ40687.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 593

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/578 (15%), Positives = 189/578 (32%), Gaps = 67/578 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L   I  +    +S   A+ YAR R  S               +I  P 
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +        A          LA   ++ + RS+  A   ++ P+ K +     
Sbjct: 347 VRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                   +  GG GYI E    +  R+     I  G+     LD++   ++  G     
Sbjct: 407 LESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLS 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGM 522
                +      +  ++   +   ++       L + +  +         +A+  Y    
Sbjct: 467 IFSREVRTFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLF 526

Query: 523 NDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
              A  +L  R                +        Y 
Sbjct: 527 GYTAYAYLWARMAAAALRQREADPAFHDGKLATARFYF 564


>gi|83952653|ref|ZP_00961383.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83835788|gb|EAP75087.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 380

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+     P    L  +    G                +           MA    
Sbjct: 26  PHARDWEAQGTIP--KELWPQIGELGFGGLYVSEDSGGSGLSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P++ + E               +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMIDTFGSDALKSRVMPEVLAME-------------KVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ +K  D  Y L+G K F+S    SDA++++ +  G      +  LL +   
Sbjct: 131 SDAAALKTRAEKT-DQGYRLNGTKAFISGGGYSDAYVVMCRT-GDDSPKGISTLLVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G RS  T +++F +     G L+G+                L+ +  S
Sbjct: 189 PGLSFGALEDKMGWRSQPTAQVQFDDCTVPAGNLVGEEGRGFSYAMQGLDGGRLNISACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + ++   + Y   R   G  +     ++  +AD+ +++ AA       A   D   
Sbjct: 249 LGAAQTAMNLTLQYMSERRAFGKSIDQFQALQFRLADLEIELQAARTFLRHAAWKLDTGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    ++ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKKFVTETGSHIVNQCLQLHGGYGYLADYGIEKLVRDLRVHEILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L V   L
Sbjct: 363 GTNEIMRLIVARNL 376


>gi|332262574|ref|XP_003280337.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 1 [Nomascus leucogenys]
          Length = 412

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|290975558|ref|XP_002670509.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi]
 gi|284084069|gb|EFC37765.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi]
          Length = 394

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 148/363 (40%), Gaps = 30/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL      GL        F          I A        +E    + PS++    V  
Sbjct: 52  KLLDSLFEVGLMGIEIPEEFGGSGANFTSSIIA--------IEELAKVDPSISVIVDVQN 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + +++  K             +  T       L+E   G+D  ++ ++ +  SDG
Sbjct: 104 TLVNNLVRNYGNK-----EQQEKYLTLLATKGLGSFCLSEASSGSDAFSLKTKAELQSDG 158

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  SS  +  +I++A  +   G   +   L D +  G+   + ++K+G R+
Sbjct: 159 SYVLNGTKCWITSSQEASFYIVMANTDFSKGYKGITAFLVDKTNPGVKIGKKEDKLGIRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           ++T E+   +      G  ++  G  +  KI I  L+   + ++   + LA+ +      
Sbjct: 219 SSTCEVILEDCKV---GPESILGGVGKGYKIAIEMLNEGRIGIAAQMIGLAQGVFDYTMP 275

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  + D  +M+   + +A +I A   + +  A   +  +  ++EAA A    
Sbjct: 276 YLKSRKQFGTPIADFQMMEYHYSKLATEIEAGRLMVYNAARMKEAGQVFTKEAAMA---- 331

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K++  ++A  V  + +E +GG G+  + S  ++YR+     I  G+ N  ++ +   
Sbjct: 332 ---KFYTSEVAGNVATKCIEMLGGVGFCRDFSAEKYYRDCIIGKIYEGTSNINLVTIAKH 388

Query: 458 LEK 460
           ++K
Sbjct: 389 VKK 391


>gi|121593019|ref|YP_984915.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120605099|gb|ABM40839.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 598

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/457 (19%), Positives = 164/457 (35%), Gaps = 68/457 (14%)

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G + D    +V     +    R+ +  G      D  +        H +      ++
Sbjct: 62  DTEGCKLDPQTHEVTPPKGFKEAYRQYVEGGWPALSCDPEYGGQGLP--HTVNQCLYEML 119

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +  AL    T    K + PK+ S E+  T             + 
Sbjct: 120 NSANQAWTMYPGLSHGAYEALLAHGTDEQKKTYLPKLVSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGC 255
           LTE   GTD+  + ++ + + DG Y ++G+K F+S+   +       ++LA+  +   G 
Sbjct: 167 LTEPHCGTDLGLLRTKAEPVGDGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGS 226

Query: 256 FLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +   +            G  N +    L++K+G   NAT ++      G L+G+ +  
Sbjct: 227 KGISLFVVPKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPHKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGG--------ILIDQP 353
              +  M     L     S+    V+   A+ YA+ R      SG          +I  P
Sbjct: 287 LAAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGKKAPDKEADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKM 407
            +++ +         A AL        D+A S  +E           ++ PI K +    
Sbjct: 347 DVRKMLLTAKAYAEGARALQVFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFVTDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                   M+  GG G+I+E  + +  R++  N I  G+     LD+L     G N    
Sbjct: 407 GHIATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN---- 462

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                    G++ KK   ++   ++    ++ +A F+
Sbjct: 463 ---------GATLKKFGKLVGQLVAEEGVNEKMAEFI 490


>gi|94499469|ref|ZP_01306006.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94428223|gb|EAT13196.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 385

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 136/377 (36%), Gaps = 26/377 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQ 145
            P  + W+K    PA H + ++    GL     +  +  +    ++ I AA    Y    
Sbjct: 23  NPNAQEWEKAGAFPA-HEVFKKMGDLGLLGINKEEKYGGMGLDHSYNIYAAEALGYASIG 81

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   +  +   ++   +  + +++              AP         + ++E 
Sbjct: 82  GVPLAIGVQTDMATPAISKFGSEELKQEFL-------------APAIAGEFVAAIAVSET 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A + +  +K  D         W  +S  +D F +LA             ++   
Sbjct: 129 GAGSDVAGLKTTAKKDGDDYIINGAKMWITNSTQADFFCVLANTSDDKPHKNKSLIVVPA 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
           +  G+      +KIG R + T  + F +        +     G +  M       L  A 
Sbjct: 189 NTPGVSVGEKIDKIGMRCSDTAPVYFDDVRVPQRYRIGAEGMGFMLQMLQFQEERLWGAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  +   + + + Y + R   G  LI+   +   +A++  +I A  AL++R      E
Sbjct: 249 SGLITLERCIEQTVEYTKERKTFGQPLIENQSIHFRLAELQTEIEALRALTYRATELMME 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  ++       +A + K    ++   V    ++  GG G+  +  +++ YR+    SI
Sbjct: 309 NKDVTK-------LASMCKLKGGRLTREVADSCLQYWGGMGFTWDNPVSQVYRDGRIASI 361

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M+  +   ++
Sbjct: 362 GGGADEIMLGIICKYMD 378


>gi|312113477|ref|YP_004011073.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218606|gb|ADP69974.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 387

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 141/374 (37%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    L +     GLH    +  +        H   A      A    
Sbjct: 32  PRAAEIDRSNAFP--RDLWQPMGALGLHGITVEEEWGGAGLGYLHHCIAVEEVSRASASV 89

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    + S    + +         + + PK+ S E+                L ++E   
Sbjct: 90  GLSYGAHSNLCVNQIRRNGADEQKRRYLPKLISGEH-------------VGALAMSEAEA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ ++ +K  D         W  ++P +D  ++ A+ +   G   +   L +   
Sbjct: 137 GSDVVSMRTRAEKRGDRYVLNGTKMWITNAPHADVLVVYAKTDPTAGQRGITAFLIEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T EL F +        +      V  +   +  + A+++   
Sbjct: 197 PGFTVSPKLDKLGMRGSDTAELVFEDCEVPEANVMGGEGRGVSVLMSGLDYERAVLAAGP 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+ +L   + Y   R   G  +    +++  +AD+A+ + +A A  + +A + D A+
Sbjct: 257 LGIMQAALDIVLPYIHERKQFGKPIGTFQLVQGKVADMAVALNSARAYVYAVARACDRAQ 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  E+AA A         +  + A  V  +A++ +GG+GYI + +  R  R++    I  
Sbjct: 317 TTREDAAGA-------ILYAAEAATRVALDAIQLLGGTGYINDTATGRLLRDAKLYEIGA 369

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 370 GTSEIRRMLIGREL 383


>gi|326330373|ref|ZP_08196683.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325951910|gb|EGD43940.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 386

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 129/374 (34%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P         +  GLH      ++                   A   +
Sbjct: 31  PYAADVDAAARFPT--EAYDALVASGLHAPHVPEAYGGDGADALSTCIVIEEIARACASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  +  + + +              AP+          L+E+  G
Sbjct: 89  SLIPAVNKLGSLPLILAGSEDIKQRYL-------------APLAAGKSTFSYALSEREAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP 267
           +D A++ ++  +  D         W  ++ +SD + +LA  +        +   + + S 
Sbjct: 136 SDTASMKTRAVQDGDHWVLSGQKSWISNAGISDYYTVLAVTDPDGRRGSNISAFVVEKSD 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G      + K+G + + T EL F   +     ++G+                +  A  +
Sbjct: 196 DGFAIGAPEKKLGIKGSPTCELTFDAVYLPGDRIIGEPGTGLQLALRTLDHTRITIAAQA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y + R   G  + D   ++  +AD+A+ + AA  L +  A   +   
Sbjct: 256 VGIAQGALDHATDYVKERQQFGKRIADFQGIQFMLADMAMKLEAARQLVYVAAAKSER-- 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +A+         K +    A  +  +A++ +GGSGY ++  + R  R++    I  
Sbjct: 314 ----DASDLSFFGAAAKCFASDAAMEITVDAVQLLGGSGYTQDFPLERMMRDAKITQIYE 369

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 370 GTNQIQRVVMARQL 383


>gi|299770631|ref|YP_003732657.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700719|gb|ADI91284.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 383

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 135/359 (37%), Gaps = 28/359 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +E +    +     A  L   +      + + +   +S + +  T   
Sbjct: 46  ALGLFGLTIPEEYEGLGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P++   E             V     LTE   G+D A++ +   K  D  Y L+G
Sbjct: 106 KSFFLPRLAHGE-------------VISSFCLTEPDAGSDAASLKTSAVKDGD-FYILNG 151

Query: 231 HKWFLSS-PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P +  F ++A+      G   +   + D    G+   +   K+G +   T +
Sbjct: 152 TKRFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGIFLGKRDKKMGQKGAHTCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +SV      L ++++YA  R  
Sbjct: 212 VIFENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGQPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GYI E +I R YR+     +  G+     + +   + +  +
Sbjct: 325 TEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLFRLYEGTTQIQQMIIARNMIRAAS 383


>gi|84684713|ref|ZP_01012613.1| acyl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667048|gb|EAQ13518.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 381

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 140/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P    L  +    GL        +      +           M+
Sbjct: 22  EHIAPYAQDWERQGTIP--KDLWPKVAELGLGGIYVSEEYGGSGLSRLDATLVFEALAMS 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
               G  +S       M+    T      W P + S E                   LTE
Sbjct: 80  CPAVGSFLSIHNMCGGMIDKFGTDEDKARWLPALTSME-------------KVFSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++ +K ++G + L+G K F+S    SDA++ + +  G  G   +  ++ 
Sbjct: 127 PGSGSDAAALRTKAEKTNEG-WKLNGTKAFISGGSYSDAYLTMVRT-GDDGPKGISAMVI 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +  L++K+G ++  T +++F +       L+G+                L+ 
Sbjct: 185 EDGATGLSFGGLEDKMGWKAQPTAQVQFDDCVVPHENLMGEEGRGFVYAMAGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++ G + +L   + Y   R   G  +     ++  +AD  + + AA     + A   
Sbjct: 245 AASALGGAQNALNLTLAYMGERKAFGKTIDQFQALQFRLADNEIKLQAARTFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       +A  A     + K +   +A  V  + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DN------KAHDATKFCAMAKMFVTDVAFDVANDCLQLHGGYGYLADYGIEKIVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M L V   +
Sbjct: 359 QILEGTNEIMRLIVSRQM 376


>gi|194873782|ref|XP_001973277.1| GG13447 [Drosophila erecta]
 gi|190655060|gb|EDV52303.1| GG13447 [Drosophila erecta]
          Length = 414

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T +L F N     
Sbjct: 193 VAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + ++   V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A    
Sbjct: 310 QSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 363 IKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLTTIAKCIKK 410


>gi|144899157|emb|CAM76021.1| isovaleryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 387

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 136/375 (36%), Gaps = 26/375 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
             D     P  + L ++    GL     +  +         H I    +   +       
Sbjct: 35  EIDHSNEFP--NQLWKKFGDMGLLGLTVEEEYGGAGMSYLEHVIAMEEISRASASVGLSY 92

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S    + +    T    + + PK+ S ++                L ++E   G+D+
Sbjct: 93  GAHSNLCVNQIRRNGTEAQKRKYLPKLISGDH-------------IGALAMSEPNAGSDV 139

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++  + +K  D         W  + P +D  ++ A+ +   G   +   + +    G  
Sbjct: 140 VSMKLRAEKKGDRYILNGTKMWITNGPDADTLVVYAKTDVNAGSKGITTFIIEKDFKGFS 199

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGM 328
             +  +K+G R + T EL F +        L      V  +   +  + A+++   +  M
Sbjct: 200 VAQKLDKLGMRGSNTGELVFQDCEVPEENVLGNVGKGVNVLMSGLDYERAVLAGGPLGIM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  +   + Y   R   G  +    +M+  IAD+   + A  A ++ +A +    ++  +
Sbjct: 260 RACMDVVVPYIHERTQFGQAIGTFQLMQGKIADMYTTMNACRAYAYAVAKACTRGETTRK 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA           +  + A  +  EA++ +GG+GYI E S  R  R++    I  G+  
Sbjct: 320 DAAG-------VILYTAEKATWMALEAIQTLGGNGYINEYSTGRLLRDAKLYEIGAGTSE 372

Query: 449 AMVLDVLNLLEKGTN 463
              + +   L + T 
Sbjct: 373 IRRMLIGRELFEETK 387


>gi|70996198|ref|XP_752854.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66850489|gb|EAL90816.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159131607|gb|EDP56720.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 437

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 136/381 (35%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E       L+ +    GL        +          I A       
Sbjct: 76  EQIGPKVREMDESEVMD--PTLVEQLFEQGLMGIEIPEEYGGAGMNFTSAIVAIEELARV 133

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +          + K W PK+               T       L+
Sbjct: 134 DPSVSVLVDVHNTLVNTAFNKWADAALKKTWLPKL--------------ATDTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 180 EPASGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFIVFANLDPSKGYKGITAFVV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    G    + + K+G R+++T  L F +     G LLG+          +     +  
Sbjct: 240 EKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGI 299

Query: 321 AIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           A         +   A  Y    R   G ++     M+  +A   ++IAAA AL +  A  
Sbjct: 300 AAQMTGLALGAWENAASYVWNDRRQFGQLIGTFQGMQHQLAQAYVEIAAARALVYNAARK 359

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K +  ++A  V + A+E +GG G++ E    + +R+S  
Sbjct: 360 KEAGQDFVQDAAMA-------KLYASQVAGRVASSAVEWMGGMGFVREGIAEKMFRDSKI 412

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 413 GAIYEGTSNIQLQTIAKLLQK 433


>gi|260557055|ref|ZP_05829272.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260409661|gb|EEX02962.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 390

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 131/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ + +  G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEANRAGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N     +  L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKVNLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      + K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|114647349|ref|XP_001162935.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 412

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|195496409|ref|XP_002095682.1| GE22545 [Drosophila yakuba]
 gi|195496430|ref|XP_002095690.1| GE22549 [Drosophila yakuba]
 gi|194181783|gb|EDW95394.1| GE22545 [Drosophila yakuba]
 gi|194181791|gb|EDW95402.1| GE22549 [Drosophila yakuba]
          Length = 414

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T +L F N     
Sbjct: 193 VAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + ++   V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A    
Sbjct: 310 QSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 363 IKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|166712845|ref|ZP_02244052.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 393

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 130/381 (34%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P    ++ ++   G      D     +  ++                 
Sbjct: 35  PHAAQWDAQGHFP--REVIAKAAALGFCGLYTDHGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S        +A   T  V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMVTWFIASYGTDAVRAQWGEAMTSG-------------ARLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +          
Sbjct: 140 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFAVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  + F N        L     G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|294853431|ref|ZP_06794103.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294819086|gb|EFG36086.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 597

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/567 (18%), Positives = 188/567 (33%), Gaps = 70/567 (12%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                      L A +        +  + + +    T      + PK+    +  T    
Sbjct: 107 YLLHTAVGEYMLSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT---- 162

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIM 245
                    + LTE   GTD+  + +     +DG Y +SG K F+S+   D       ++
Sbjct: 163 ---------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLV 213

Query: 246 LAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + +   
Sbjct: 214 LARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEA 273

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------- 347
            G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R            
Sbjct: 274 TGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAP 333

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIM 396
                 +I  P ++R + +I     A  AL   +A   D A    +EA          ++
Sbjct: 334 EKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLL 393

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD++ 
Sbjct: 394 TPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLVG 453

Query: 457 --LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL-- 510
             L   G       F  + +  +     +K+    +       + +    +L +      
Sbjct: 454 RKLALNGGCAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMAKP 513

Query: 511 --ASSAAALYRAGMNDIADVFLENRFL 535
             A +A+  Y      +A  ++  R  
Sbjct: 514 DNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|195377629|ref|XP_002047591.1| GJ13529 [Drosophila virilis]
 gi|194154749|gb|EDW69933.1| GJ13529 [Drosophila virilis]
          Length = 414

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 115/302 (38%), Gaps = 30/302 (9%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    + PK+                  A    LTE   G+D  ++ +  +K    
Sbjct: 133 FGNAEQKAKYLPKL--------------AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSH 178

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +S ++  F++ A  +   G   +   + D    GL   + ++K+G R++
Sbjct: 179 YVLNGTKMWISNSDVAGVFLVFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRAS 238

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHY 338
            T  + F N       + N+        K    +L+   + +    V LA+      I Y
Sbjct: 239 GTCMITFDNVRVP---EENILGTFGHGYKYAAGFLNEGRIGIGAQMVGLAQGTFDATIPY 295

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +   M+  IA IA +I AA  L++  A   +      +EAA A     
Sbjct: 296 LLERKQFGDAIYNFQSMQHQIATIATEIEAARLLTYNAARLQEAGVPFLKEAAMA----- 350

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K++  ++A     + ++ +GG G+  +    ++YR++   +I  G+ N  +  +   +
Sbjct: 351 --KFYASEVAQRAATKCIDWMGGVGFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCV 408

Query: 459 EK 460
           +K
Sbjct: 409 KK 410


>gi|306846013|ref|ZP_07478580.1| acyl-COA dehydrogenase [Brucella sp. BO1]
 gi|306273648|gb|EFM55493.1| acyl-COA dehydrogenase [Brucella sp. BO1]
          Length = 597

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEASPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|302767660|ref|XP_002967250.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii]
 gi|300165241|gb|EFJ31849.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii]
          Length = 373

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 140/387 (36%), Gaps = 35/387 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ ++ P    +LR++   G                +              +  
Sbjct: 9   PNAAQWDRDKYFPV--EVLRKAAGLGFGGMFCAEDVGGSRLNRVDGAVIFEALAYGDVST 66

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++      S++      +    W PK+   E             +     LTE   G
Sbjct: 67  TAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQME-------------LFSSYCLTEPSSG 113

Query: 209 TDIAAIT--------SQGQK-ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           +D A++         +  ++      Y L+G K F+S   +SD ++++A+  G +G   +
Sbjct: 114 SDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART-GALGPKGI 172

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL-- 315
              L +    GL + R ++K+G RS  T  +            L     G    M  L  
Sbjct: 173 SCFLLEKGMPGLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGREGQGFAIAMAGLDG 232

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S  G +  L  A  YA  R   G  + +    +  +AD+   + A+  +   
Sbjct: 233 GRINIASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFKLADMQTALHASRLMVSN 292

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D    +      A   A + K +       +  +A++  GG GY+++  + R+ R
Sbjct: 293 AAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQLHGGYGYLKDYPVERYLR 346

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGT 462
           +   ++IL G+   M + +   + +  
Sbjct: 347 DLRVHTILEGTNEIMRVVLFRHMLQQP 373


>gi|163738877|ref|ZP_02146290.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161387682|gb|EDQ12038.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 568

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/495 (18%), Positives = 181/495 (36%), Gaps = 46/495 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA-------YGPGGERW 94
           LL  ++               + V++    E  +  +     L+        +   G   
Sbjct: 13  LLNHIVGYSDISATDRFSEASDDVVTAILTEAGKFCDEVMAPLNRGGDLQPAHLENGV-- 70

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
             +   P +    +     G        +F  +            +   A L        
Sbjct: 71  --LRTSPGYAEGWQAISEGGWIGMSASEAFGGMGLPMTLTTAVNEMMSGACLSLQLAPLM 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +  +   + PK+ S E+  T             + LTE + G+D+ A+
Sbjct: 129 SQGQIEALEHHASDEIKSLYLPKLISGEWSGT-------------MNLTEPQAGSDVGAL 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLE 263
           +S+   + DG Y +SG K ++S   +D       ++LA++         +  FLVP+ L 
Sbjct: 176 SSKADPLDDGTYAISGQKIYISWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLP 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           D     G  N L    L++K+G   + T  +++    G+++G        +  M     L
Sbjct: 236 DADGNPGKANDLKVVSLEHKMGLHGSPTCVMQYDGAIGWMIGQPGGGLAAMFTMMNNARL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSG---GILIDQPVMKRAIADIALDIAAATALSFR 375
                 V     +  +A+ YA  R       G ++D   ++R + ++  D+ AA A+   
Sbjct: 296 GVGGQGVGIAGAAYQKALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLA 355

Query: 376 LANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + + D   A +  E AA A  + PI K +  +    V    ++  GG G+IEE   A+ 
Sbjct: 356 CSQAIDMQTATATQEWAARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQF 415

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           YR+    +I  G+     +D++   +  G ++  +L   +E+    +      +      
Sbjct: 416 YRDVRVTAIYEGTNGIQAMDLVGRKMMDGGDMAHRLIDEIEEQAERARTTHPNMAEAVWQ 475

Query: 493 LCKEDKGLARFLTEK 507
            C+  +    +LT +
Sbjct: 476 ACESLREATEWLTAQ 490


>gi|169858313|ref|XP_001835802.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
 gi|116503140|gb|EAU86035.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
          Length = 597

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 225/544 (41%), Gaps = 59/544 (10%)

Query: 27  QPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNT 81
           QP  +   N Y  D  L +L+           V  +LE LG+ VL+   + LA  A  + 
Sbjct: 8   QPIPYSEENVYLEDPTLPSLLRRLLPNSVLRDVQPDLERLGKEVLT-VIRPLADSAAVSN 66

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  Y   G R D +E    W  L   +  +GL    ++R++    R        A++ 
Sbjct: 67  PTLTQYDQWGRRIDNLETSEGWRKLKAIAQQEGLPGIFYERTYGEHSR----IYGFAKML 122

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           LM           S+T  +A ++ L+  P + +D  P++ SR+            +   G
Sbjct: 123 LMVGDTQEVFCPLSMTDGTARVIELIGNPALKRDVLPRLISRD---------PSQAFTAG 173

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDAFIMLAQV----- 249
             +TE+ GG+D++   +    +S        Y L+G KWF S+  S+  + LA+      
Sbjct: 174 QWMTERPGGSDVSLTETTATDLSQTHSYGPKYSLNGIKWFSSATDSEVSVALARTGSISA 233

Query: 250 -EGRVGCFLVPRLLE----------DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
               +  FL+P  L             + N +   RLKNKIG     T EL   NT G+L
Sbjct: 234 GSRGLSLFLIPLRLPLFPAPSDSKPSSTSNNIFIHRLKNKIGTHVLPTAELSLQNTEGYL 293

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--HVSGGILIDQPVMK 356
           +  LN     +  +  +  L SAI SV  +R  L+ A  YAR R       +L D P+  
Sbjct: 294 ISPLNQGVKHITPVLNITRLWSAITSVGHLRKCLSIATSYARVRAIKSGTQLLQDNPLHV 353

Query: 357 RAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +A I L   A T + F +A      +   +  EEA   R++ P+ K +C + A   + 
Sbjct: 354 AQLAQINLLYRALTHMCFSVAGLMGKVECGVASGEEAKRLRMLTPVVKAFCAEKASVGME 413

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN------LLEKGTNLFEQ 467
           EAM  +GG+GY+EE  I R  R+     I  G+   + LD+         L+  T+  E 
Sbjct: 414 EAMSALGGAGYMEENGIGRAIRDGLVEKIWEGTVVVLALDLARSALDPSTLKAFTSWAET 473

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKE------DKGLARFLTEKIALASSAAALYRAG 521
           +  ++   +         +LR++++   +          AR     +   +S+ +L    
Sbjct: 474 IIDSIPSSVQPRLNDATGLLREALATLPKVYSTPMHPLAARPGLMVVGYIASSISLLEHA 533

Query: 522 MNDI 525
           +  +
Sbjct: 534 LWAL 537


>gi|115380414|ref|ZP_01467405.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Stigmatella aurantiaca DW4/3-1]
 gi|310821695|ref|YP_003954053.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115362575|gb|EAU61819.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Stigmatella aurantiaca DW4/3-1]
 gi|309394767|gb|ADO72226.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 552

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 121/527 (22%), Positives = 203/527 (38%), Gaps = 46/527 (8%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELE----LLGEYVLSCTAQELARMANY 79
             Q    +G N Y  DSLL   +A   P  + + L      LGE +              
Sbjct: 3   FFQDAPRLG-NQYDDDSLLQGYLARKLPEELRRSLTDTFRELGE-LSGQYFYAFQLRDRL 60

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L  +   G R D+++  P W      +   GL    +++    + R      + A 
Sbjct: 61  NEPELTQWDAWGRRVDRIDVTPLWREAEVLTARHGLVAVAYEQKSAELSRIH----QFAL 116

Query: 140 LYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            Y++      +      +  +A  +  +    +     P + SR+               
Sbjct: 117 NYVIQPSLDVYSCPLAMTDGAARTLLSLGNTALIDRALPHLTSRD---------PAEFWT 167

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
            G  +TE+ GG+D+    +  ++  +G + L G KWF S+  +   + LA+ EG      
Sbjct: 168 SGQWMTERTGGSDVGLTQTVARQTPEG-WRLYGTKWFTSATTAQMALTLARPEGNGPGGK 226

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F V     DG  NG+   RLK+K+G R   T EL         +  L      +  
Sbjct: 227 GLALFYVETRQPDGFLNGILINRLKDKLGTRKVPTAELTLDGALAVPVAGLTDGIRNMSS 286

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +    +A+ SV  MR ++A A  YA RR   G  L ++P+    +A +  +   A  
Sbjct: 287 MLNVTRTWNAVASVWMMRRAMALARDYASRRVQFGAKLSEKPLHVDTLAGMEAEFEGAFL 346

Query: 372 LSFRLANSF--DEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           L+FR A      EAK  +E+    + +  P+ K    K   A+ +EA+E  GG+GY+E+ 
Sbjct: 347 LAFRAAELLGRMEAKVATEQDLQLQRLVTPLAKLTTGKQTVALTSEALESFGGAGYVEDT 406

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVIT 485
            + R   ++   SI  G+ N + LD L  L K   L    E + + L     S  K  + 
Sbjct: 407 GLPRMLADAQVLSIWEGTTNVLSLDALRALAKEGTLDVFHEDVEARLAVAKESGLKPCVK 466

Query: 486 ILRDSISLCK-----------EDKGLARFLTEKIALASSAAALYRAG 521
             +D++   +             +  AR     +      A L    
Sbjct: 467 AAQDALEHARGWASQTLANPVGLEAGARRFALTLGRTMELALLVEHA 513


>gi|262280197|ref|ZP_06057981.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257975|gb|EEY76709.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 390

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 75/360 (20%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ V 
Sbjct: 52  RDLWNKAGELGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYVN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E             V   + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------VVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  +++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 D-YVINGSKIFITNGYLCDMVVVVCKTGNNDKGSANLSLIIVEADRAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      E K   E AA A     
Sbjct: 278 TKDRKAFGKHIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLEEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   ++ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKIVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|40062479|gb|AAR37431.1| acyl-CoA dehydrogenase [uncultured marine bacterium 105]
          Length = 391

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 134/364 (36%), Gaps = 35/364 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL+      G+        F+         I A  +  +++++    +   V +  ++ 
Sbjct: 49  RALIDDLFKLGIMGIEAPDEFQGSGGYFFQTILA--IEAISRVDPSIALLVDVHNTLVIT 106

Query: 164 ---LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
                    + + + P++ S              S      L+E   G+D  ++T++   
Sbjct: 107 ALLQWGNQDLKRRYLPRLTS--------------SSVGAYALSESSSGSDAFSLTTRCIP 152

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  ++  +D F++ A  +       +   + +    G      ++K+G
Sbjct: 153 RDGAFELTGRKLWITNAAEADIFVVFANAKPESEHRGITAFIVERDMEGFSIGVKEDKLG 212

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----E 334
            R+++T EL        L+ + N+     +  K+ I  L++  + +    + LA      
Sbjct: 213 IRASSTCELILDAC---LVPNSNLLGEIGQGYKVAIETLNAGRIGIGAQMIGLASGALDH 269

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI Y + R   G  + +   ++  +A  A ++ AA    +  A   D       E+A   
Sbjct: 270 AIAYTKERKQFGKPIAEFQGVQFQLAQAATELEAARLTVYNAARLRDGGHKFLTESAM-- 327

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +   +A  V + A++  GG GY+++  + + YR++    I  G+ N  +  +
Sbjct: 328 -----CKLFSSNVAEKVTSLAVQLFGGYGYVKDYPVEKLYRDAKIGQIYEGTSNLQLQTI 382

Query: 455 LNLL 458
              +
Sbjct: 383 AKQI 386


>gi|194865856|ref|XP_001971637.1| GG15072 [Drosophila erecta]
 gi|190653420|gb|EDV50663.1| GG15072 [Drosophila erecta]
          Length = 420

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 150/431 (34%), Gaps = 37/431 (8%)

Query: 38  SSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
             D  L     +A++P        + G        +E+A   N+   +L    P  +  D
Sbjct: 16  RGDRPLSWTRALAHYPVND----AMFGLDEDRQKLREVAF--NFFQKELA---PLAKEID 66

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           K++         ++    G      +  F         H I        A   A    + 
Sbjct: 67  KLDNFKDMRPFWKKLGDLGFLGITAEPDFGGTGGSYLDHCIIMEEFSRAAGGVALSYGAH 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    T    + + PK+ S E+               GL ++E   G+D+ ++
Sbjct: 127 SNLCINQLTKNGTLEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSM 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCY 272
             + ++  D         W  +   +D  I+ A+  G        +   + + +  G   
Sbjct: 174 KLRAERKGDYYVLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWEGFSV 233

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +  +K+G R ++T EL F +       +LG  N     +        L  A   V  M+
Sbjct: 234 AQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQ 293

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A S D      ++
Sbjct: 294 AACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKD 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                        +  + A  V  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 354 -------CAGVILYTAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEI 406

Query: 450 MVLDVLNLLEK 460
               +   L +
Sbjct: 407 RRWLIGRQLNQ 417


>gi|301632163|ref|XP_002945160.1| PREDICTED: acyl-CoA dehydrogenase-like [Xenopus (Silurana)
           tropicalis]
          Length = 385

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 136/364 (37%), Gaps = 26/364 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++     GL        F  +      + R    L   A      + +     +  + +
Sbjct: 40  IVQEMRELGLFGMTIPERFGGLELTMEEECRVLFELCQTAPAFRSVIGTTVGIGSQGILM 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W P++ + E                   LTE   G+D AA+ +   K  D 
Sbjct: 100 DGTPEQQAQWLPRLATGEIM-------------ASFALTEPEAGSDAAALRTSAIKKGDE 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++P +  F ++A+ + G  G   V   + D    G+ + +   K+G R 
Sbjct: 147 YIVNGTKRFITNAPHAGMFTLMARTDPGDKGAGGVSAFIVDAQSPGISFGKNDKKMGQRG 206

Query: 284 NATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N          L    G    MK+L    +  A ++V   R  L +A+ YA
Sbjct: 207 AHTCDVIFDNVRVPAANLIGLQEGQGFKTAMKVLEKGRIHIAAVAVGCARRILRDALAYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + D  +++  +AD   ++ AA  ++   A   DE +  + E       A  
Sbjct: 267 LERQQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDEGRDVAIE-------ASC 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           TK +  +M   V   A++ +GG+GY+ E  I R YR+     +  G+     + +   + 
Sbjct: 320 TKMFTTEMCGRVADRAVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQIIIARGMV 379

Query: 460 KGTN 463
           +   
Sbjct: 380 RAMR 383


>gi|114656347|ref|XP_510308.2| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 8 [Pan
           troglodytes]
 gi|332843533|ref|XP_001143110.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 5
           [Pan troglodytes]
          Length = 423

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 125/379 (32%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 398

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 399 LYEIGAGTSEVRRLVIGRA 417


>gi|229155931|ref|ZP_04284032.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228627538|gb|EEK84264.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|302344669|ref|YP_003809198.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641282|gb|ADK86604.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 381

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 131/358 (36%), Gaps = 26/358 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVAL 164
           R     GL    +   +          + A      A ++        + +   A  + +
Sbjct: 43  RAMGEFGLLGLHFPEEYGGGGADVVTTVLAGEALGEAGVDGGLTLAYGAHTFLCADTIFV 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K + PK+ S ++                +GLTE   G+D+A + ++  +  D 
Sbjct: 103 HGAEEQKKRYVPKLLSGQW-------------IGCMGLTEPDAGSDVAGMKTRATRQGDE 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   +  + P++D  ++ A+ E        V   + +    G    +  NK+G R+
Sbjct: 150 WVLNGSKIFITNGPIADVCLVYARTEAEGDRHAGVSAFIVEKGAPGFTAGKPLNKLGVRT 209

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYAR 340
           + T EL F +              G +  M+ + +  SA+++  + GM   +   + YA+
Sbjct: 210 SHTSELFFEDCRVPASAMCGPEGAGFLMSMQTVEWDRSALLAPFLGGMTNLIQRCVKYAK 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +K  +AD+ L + AA  L +R+A   D+ +          + A + 
Sbjct: 270 ERQQFGRPIAQFQAIKHKLADMRLFVDAARGLVYRIAWCKDQGRP------LNHLEAAVA 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +    +     + +   GG G+  E  + R +R+     I  G+     + +  ++
Sbjct: 324 KLFIGDWSLKPTNDGVMIHGGYGFCHEYDVERIFRDCRLAPIGGGTSEIQKMIISKMI 381


>gi|284167566|ref|YP_003405844.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017221|gb|ADB63171.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 381

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 135/378 (35%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  +  D  +  P    L+      GL    +   +        A+      +   +   
Sbjct: 26  PIADEIDHTDEFP--RELVDELAELGLMGMPFPEEYGGAGLDYHAYPAALEEISRGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+         K++               P+ +        L+E   
Sbjct: 84  GTIVAAHTSLAGNMLYEFGDESQKKEYL-------------TPLAEGRDIGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+ +  +K  D      G  W  +  ++D   + A+ +   G   +   +     
Sbjct: 131 GSDVPAMETTAEKAGDEYVVNGGKLWISNGSVADTVTLFAKTDPDAGSKGISSFIVRPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIM 323
            +G   +  + K+G++   T EL F +        L     G V+ +K      +  A  
Sbjct: 191 DDGFIVEGTEEKLGDKGCPTAELRFDDLRIPENRLLGEEGEGFVQALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L EA  Y++ R      + D   ++  +AD+     AA  L    A+     
Sbjct: 251 SVGIAQAALDEARKYSQDREQFDRPISDFQAIQHKLADMDTKTRAARLLMHDAADRKMRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  +EAA A       K +  +++  +  E ++  GG GY ++ +  R YR++  N I 
Sbjct: 311 ENFVKEAAQA-------KLYASEVSREIANEGIQIHGGYGYTKDFAAQRFYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+   +   +   L   
Sbjct: 364 EGTSEVLRNTIARELLNA 381


>gi|254694010|ref|ZP_05155838.1| Acyl-COA dehydrogenase, short-chain specific [Brucella abortus bv.
           3 str. Tulya]
 gi|261214301|ref|ZP_05928582.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260915908|gb|EEX82769.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
          Length = 385

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 76/394 (19%), Positives = 143/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTIIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMPGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  E ++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANETLQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|229161302|ref|ZP_04289287.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
 gi|228622116|gb|EEK78957.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 153/414 (36%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVISAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMVIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E     +E DL +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIED--HEVESDLENVERNHRYILLAKQLLKQSLKTLSKTPGL 455


>gi|297563334|ref|YP_003682308.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847782|gb|ADH69802.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 384

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 136/401 (33%), Gaps = 33/401 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R A  +  +     P     D+    P     L   +    H       ++ 
Sbjct: 10  TEEHEEL-REAVRSVAE-DKIAPHAAEVDERSAFP--QDALDALVATDFHAPHIAEEYDG 65

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           V                    +  + + +      + L  +  V + + P++ S E    
Sbjct: 66  VGADALATCIVIEEVARVCASSSLIPAVNKLGTMPLILGASEEVKRRYLPEVASGE---- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GL+E+  G+D A++ +Q     DG        W  ++ +S  + +L
Sbjct: 122 ---------AMFSYGLSEREAGSDTASMRTQAVADGDGWILNGQKSWITNAGVSKYYTVL 172

Query: 247 AQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A  +        V   +      G      + K+G + + T EL F N          + 
Sbjct: 173 AVTDPEGARGRNVSAFVLHADDEGFTLGEPERKLGIKGSPTRELFFDNVRVP---GDRIV 229

Query: 306 TGPVEDMKIL------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             P E +KI         +     +V   + +L +A+ Y + R   G  + D   ++  +
Sbjct: 230 GAPGEGLKIALRTLDHTRVTIGAQAVGIAQGALDQAVAYVKERKQFGRHIADFQGVQFML 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ +  A  + +  A   +                   K +    A  +  +A++ +
Sbjct: 290 ADMAMKLETARQMVYVAAAKSERGDDD------LPFYGAAAKCFASDAAMEITTDAVQLL 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG+GY+++  + R  R++    I  G+     + +   L K
Sbjct: 344 GGAGYVKDFPLERMMRDAKITQIYEGTNQIQRMVMARQLLK 384


>gi|146307065|ref|YP_001187530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575266|gb|ABP84798.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 375

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 128/374 (34%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    PA    +      G    +  + +            A           
Sbjct: 24  PFAADWDREHRFPA--EAIAEMGQLGFMGMLVPQQWGGAETGHLAYAMALEEVAAGDGAC 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +   M  L   +    + +               P+ + S+     LTE + 
Sbjct: 82  STIMSVHNSVGCMPILKYGSEAQKQRFL-------------RPLAEGSMLGAFALTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + + ++ ++           ++  S   +   I+ A  +   G   +   +     
Sbjct: 129 GSDASDLRTRARRDGGHYVLSGAKQFITSGSHAGMVIVFAVTDPGAGKKGISAFIVPTDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R+++K+G  ++ T +++           LG+                +  A  S
Sbjct: 189 PGFSVVRVEDKLGQHASDTCQIQLDEVRIPAELRLGEEGEGYRIALANLEGGRIGIAAQS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  YA  R   G  +I+   +   +AD+A  IA A  +    A+  +   
Sbjct: 249 VGMARAAFEAARDYAHERVTFGKPIIEHQAVAFRLADMATQIAVARQMVHHAASLREAGL 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA+ A       K +  +MA  V + A++ +GG GY+++  + R YR+     I  
Sbjct: 309 PCLSEASMA-------KLFASEMAERVCSAAIQTLGGYGYLKDFPVERIYRDVRVCQIYE 361

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   + +   L
Sbjct: 362 GTSDVQRMVIARGL 375


>gi|91780314|ref|YP_555521.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692974|gb|ABE36171.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 378

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 131/394 (33%), Gaps = 29/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +        P   +WD+    P    ++ +    GL        +      
Sbjct: 9   QRMIRDAARDFAT-QCLAPHAAKWDRDGDIP--QNIVSQLGELGLMGMTVPAEWGGTYTD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
                 A             +MS   +      L   T      +   + S         
Sbjct: 66  YVAYALAVEEIAAGCAACATMMSVHNSVGCSPILNFGTDEQKSLYLADLASG-------- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                       LTE + G++   + ++   + DG + L+G K F+++   +   I+ A 
Sbjct: 118 -----RAIGAFCLTEPQAGSEAHNLRTRAV-LRDGTWVLNGSKQFVTNGRRAAVAIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
            +   G   +   +      G    + + K+G R++ T  +   +        L     G
Sbjct: 172 TDPDAGKRGISAFIVPTHTPGFKVGKPEKKLGIRASDTCPVTLEDCAVPESTLLGRRGEG 231

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +  L    +  A  ++   R +   A  YA +R   G  + +   +   +AD+   
Sbjct: 232 LKIALSNLEGGRIGIAAQAIGIARAAFDAARSYAAQRIQFGKPIREHQSVANMLADMITR 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A           E       A   K +  ++A  V ++A++  GG GY+
Sbjct: 292 LNAARLLVHHAARLRSAGLPCLSE-------ASQAKLYASEVAEEVCSQAIQIHGGYGYL 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           E+  + RHYR++    I  G+     + +   L+
Sbjct: 345 EDYPVERHYRDARITQIYEGTSEVQRMVIARQLD 378


>gi|237798437|ref|ZP_04586898.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021288|gb|EGI01345.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 304

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/304 (33%), Positives = 147/304 (48%), Gaps = 11/304 (3%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMA 77
           +++    NQPP   G+N Y  D  L      + +      ++  G             +A
Sbjct: 7   AETHLVTNQPPSLDGVNLYRIDLPLQKWSQRYGACWAQARIDAYGALAGGP-LMAAGFLA 65

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N N P   ++   G R D VEFHPA+H L+  +I  G+    W        +  AH  RA
Sbjct: 66  NRNKPVFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGITSLPWTEP-----QPGAHVARA 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  YL  Q + G     ++T AS+ AL   P +   W PK+ S +YDP N     K    
Sbjct: 121 AMSYLHTQADPGRGCPLTMTFASVPALRQQPGLADIWLPKVLSTQYDPRNVGIAHKAGAT 180

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           IG+ +TEK+GGTD+ A T++      G     Y L GHKWF S+PM DAF+ LAQ    +
Sbjct: 181 IGMAMTEKQGGTDVRANTTRAFPAGVGGPGKAYELVGHKWFCSAPMCDAFLTLAQTGKGL 240

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
            CFL+PR   D + N    QRLK+K+GN SNA+ E+EF     +++G+       + +M 
Sbjct: 241 SCFLLPRHRPDDTRNEFYIQRLKDKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMV 300

Query: 314 ILIY 317
            +  
Sbjct: 301 AMTR 304


>gi|149243125|pdb|2PG0|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Geobacillus Kaustophilus
 gi|149243126|pdb|2PG0|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Geobacillus Kaustophilus
          Length = 385

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 144/377 (38%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +   +   +G  C   D  +  +    A+ +             
Sbjct: 31  PHYNDWEKRGIIP--RSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSL 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    + W PK  + E             +   + +TE   G
Sbjct: 89  VGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    I++A + +   +     +  L+ + 
Sbjct: 136 SDLANISTTAVKDGD-YYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRGISLLVVER 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 195 DTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAI 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V  +    Y ++R   G  + +   ++  +A++A +IA       R+      
Sbjct: 255 AAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    E + A+        W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I
Sbjct: 315 GKQIVTEVSMAKW-------WITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAI 367

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 368 YAGTNEMMKTIIARQLD 384


>gi|312195948|ref|YP_004016009.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227284|gb|ADP80139.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 387

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 127/381 (33%), Gaps = 32/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     L      G         +                       +
Sbjct: 31  PHAADVDEHERFP--QEALDALNRAGFAAVHVPTEYGGEGADSVATCIVIEEVARGCASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I + E                   L+E+  G
Sbjct: 89  SLIPAVNKLGTMPILLAGSEELKKLVLPSIAAGE-------------AMASYALSEREAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGS 266
           +D A++ ++  +            W  ++ +S  + ++A  E         V   +    
Sbjct: 136 SDTASMRARASRDGSDWVLNGTKCWITNAGISTWYTVMAVTEPDAARKVDGVSAFVVHKD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G      + K+G + + T E+ FS+     +    +   P   ++  +  LD    ++
Sbjct: 196 DPGFEVGSKERKLGIKGSPTREIHFSDCR---IPGDRIIGAPGSGLRTALRTLDHTRPTI 252

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+     +I Y + R   G  + D   ++  +AD+A+ I AA  L +  A   
Sbjct: 253 GAQAVGIAQGALEASIAYTKERKQFGRRIADNQAVQFMLADMAMKIEAARHLVYVAAARA 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +           +    K +   +A +V  +A++  GG+GY  +  + R  R++   
Sbjct: 313 ERGEPD------LGFVTAAAKCYASDVAMSVTTDAVQLFGGAGYTRDFPVERMMRDAKIT 366

Query: 441 SILLGSGNAMVLDVLNLLEKG 461
            I  G+     + +   L KG
Sbjct: 367 QIYEGTNQIQRVVMSRQLLKG 387


>gi|224367888|ref|YP_002602051.1| Acd1 [Desulfobacterium autotrophicum HRM2]
 gi|223690604|gb|ACN13887.1| Acd1 [Desulfobacterium autotrophicum HRM2]
          Length = 615

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 167/465 (35%), Gaps = 58/465 (12%)

Query: 82  PQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P        G  +D+  V     +   L             D  F            A  
Sbjct: 55  PTFTECDRQGVNFDRGCVTVPECFKRGLDLLRKGEWGALTADPEFGGQGLPHTIAQAALD 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             + A       +     +  M+    TP     +  K+++ E+                
Sbjct: 115 YLIGANYTMMVYVILGHGAGKMIDYFGTPAQKALFLEKLYTLEW-------------GGS 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM---SDAFI--MLAQVEG--- 251
           + LTE   G+D+ A+T+   K  DG Y ++G+K F+++     +D  I  +LA++EG   
Sbjct: 162 MLLTEPSAGSDLGALTTTATKNDDGTYSITGNKIFITNGEQNLTDNIIHPVLARIEGAPA 221

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLG 300
               +  F+VP++  +     G  N +    ++ K+G   + T  L         GFLLG
Sbjct: 222 GTRGISIFIVPKIWVNEDGSFGESNDVVCTGVEEKMGLHGSPTCSLSLGSKGQCRGFLLG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------- 347
             N     +  M   + L+    + +    +   A+ YAR R   G              
Sbjct: 282 KENQGMQIMFHMMNEVRLEVGTQAATHASCAYLYALDYARTRCQ-GRSLETSRDSSAPQV 340

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITK 401
            +I  P ++R +  +   +    +L +  A   D+      +A          I+ PI K
Sbjct: 341 PIIQHPDVRRMLTKMKAHVEGMRSLLYYTAFCIDKGHCADTQAEKDRYQGLTEILTPIVK 400

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +C +    V  +AM+  GG GY  E  + +  R+    SI  G+     +D L    K 
Sbjct: 401 AYCSERGFDVCVDAMQVFGGYGYTREYPMEQLVRDCKICSIYEGANGIQAMDFLG--RKL 458

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
           T       ++L +++  +G++ +    + + +  E    A  L E
Sbjct: 459 TMAKGAFLTSLVEEIKKTGQRAME--TEGLEMMGEKVTAAAELLE 501


>gi|222085090|ref|YP_002543620.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221722538|gb|ACM25694.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 592

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 110/583 (18%), Positives = 207/583 (35%), Gaps = 85/583 (14%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW--DKVEF 99
           L  +     ++    L  L   VL     E  R A +   P        G R    KV  
Sbjct: 13  LKHVTGMGQAMEEGRLGDLSGDVLDAILTEAGRFAGDEMEPLAEIGDRQGARLVDGKVVL 72

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              W  L R  I  G +       +        H +  A L +         ++P++T  
Sbjct: 73  PDGWEKLYRDWIAGGWNGLTAPEEYGGQGLP--HMLNVATLEMWNSASMAFGLAPTLTMG 130

Query: 160 SMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL    +  +   +  K+ + E+  T             + LTE   G+D+ A+ ++
Sbjct: 131 AVEALVAHGSADLKSKYLAKLVTGEWAGT-------------MNLTEPHAGSDVGALRTR 177

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
             + +DG Y L G K F++    +A       +LA++         +  FLVP+ L +  
Sbjct: 178 ADRHNDGTYRLFGQKIFITWGDHEAAENIIHFVLARIPDAPAGTRGISLFLVPKFLVNDD 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMK 313
              G+ N      L++K+G   + T  + + +           +L+G+ N     +  M 
Sbjct: 238 GSLGARNDYFAHSLEHKLGIHGSPTCTMIYGDGKYGDERGAVAWLVGEENKGLACMFTMM 297

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--------SG-GILIDQPVMKRAIADIAL 364
               L   I  V+    +  +AI YA+ R           G   +I+ P + R +  +  
Sbjct: 298 NNARLAVGIQGVAIAEAATQKAIAYAKERTQGRAPGTTAFGMSPIIEHPDIARMLLTMKA 357

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIG 420
               + A+ +  A + D +   + +A Y    A ++ PI K +       V +  ++  G
Sbjct: 358 LTQGSRAICYACAEAIDMSHRDAGKARYWQERAALLTPIAKSFSTDAGVDVASLGIQVHG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL-------------DVLNLLEKGTNLFEQ 467
           G G+IEE   AR  R++    I  G+     +              V   + +   + + 
Sbjct: 418 GMGFIEETGAARLLRDARIAPIYEGTNGIQAIDLVTRKLTISNGDQVRGFITELRGIADA 477

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKIA----------LASSAA 515
           +  +     G +  ++   + D  +  +    +     + E +A          L  +  
Sbjct: 478 VAKSNLDGFGQTADRLNAAITDLETASEWLLAQQAEGHVAEALAGATPYQRLFGLVLTGC 537

Query: 516 ALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            L + G+ DIAD   E R      +   ML      A + D +
Sbjct: 538 YLAKGGLVDIADGDSEKRIALCRFAAENMLAET---AALTDRV 577


>gi|51230630|ref|NP_001003743.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio
           rerio]
 gi|50925422|gb|AAH79521.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Danio rerio]
          Length = 405

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK    PA    ++     G+       S                 YL   L    L   
Sbjct: 54  DKEHRFPA--KQVQELGAMGVMAVEVPESLGGAGMD----------YLAYCLAVEELSRG 101

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
             ++  +V++  +  +      K  S E       P           L+E   G+D  A 
Sbjct: 102 CASTGVIVSVNNSLYIGPIL--KFGSEEQKKQWITPFTTGEKVGCFALSEPGNGSDAGAA 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           ++  Q+  +         W  +S  + A ++ A  +  +    +   L      GL   +
Sbjct: 160 STLAQQEGNEWVLNGTKAWITNSWDASATVVFATTDKSLKHKGISAFLVPMPHPGLSLGK 219

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            ++K+G R+++T  +   +    L   L     G    M+ L    L  A  ++   + +
Sbjct: 220 KEDKLGIRASSTANIILEDCRIPLGNMLGERGMGFKIAMQTLDSGRLGIAAQALGIAQAA 279

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A  YA +R   G  +     ++  +AD+A+ I +A  L+++ A   D  K  ++EAA
Sbjct: 280 LDCAADYAHKRTAFGAPIGKLQAIQFKLADMAVAIESARLLTWKAALLRDAKKPFTKEAA 339

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A     +          +A++ +GG GY+ +    RHYR++    I  G+     
Sbjct: 340 MAKLAASEAATFAS-------HQAIQVLGGMGYVTDMPAERHYRDARITEIYEGTSEIQR 392

Query: 452 LDVLNLLEK 460
           L + N + K
Sbjct: 393 LVIANNILK 401


>gi|27376092|ref|NP_767621.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349231|dbj|BAC46246.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 409

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/425 (23%), Positives = 162/425 (38%), Gaps = 31/425 (7%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL---HAYGPGGERWDKV 97
            L  + +  F     + +   GE  +          A  +  +        P    WD+ 
Sbjct: 7   PLRASELPRFQPWWMRRIRPRGESAMKSPFYTAEHDAFRDVMRRFVEKEISPFAHEWDEA 66

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P   AL R++   GL    +   +  +   Q  KI A++    A          S T
Sbjct: 67  GEFP--RALYRKAAEIGLLGLGFPEEYGGIAADQFMKIVASQELAQAGAGGVSASLMSHT 124

Query: 158 SA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +A    P V     P++ + E                 L +TE  GG+D+A + +
Sbjct: 125 IGSPPIARAARPEVKARVLPQVLAGE-------------KISALAITEPGGGSDVANLRT 171

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + ++  D  Y +SG K F++S M   ++ +A   G  G   V  LL  G   GL   +LK
Sbjct: 172 RARRDGDH-YVVSGEKTFITSGMRADYLTVAVRTGGEGAGGVSLLLIAGDTPGLSRTKLK 230

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G  ++ T  L F +       L+G+       +        +  A    +  RV L 
Sbjct: 231 -KMGWWASDTATLHFDDCRVPAENLIGEEGQGFKIIMQNFNSERMGMAAGCTAFARVCLD 289

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           EAI YA+ R   G  L    V++  I D+A  +AA+ A+   LA   ++ +S   E    
Sbjct: 290 EAIAYAKERKTFGKPLAQHQVIRHKIVDMAQKVAASQAMLEMLAWRLEQGESPVAEICMM 349

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +  A  T  +C        +EA++  GG+G++      R YRE   N+I  G+   M   
Sbjct: 350 KNQATQTMAFC-------ASEAVQIFGGAGFMRGIKAERIYREVKVNAIGGGTEEIMKDL 402

Query: 454 VLNLL 458
               +
Sbjct: 403 ASRQM 407


>gi|228914944|ref|ZP_04078549.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228844740|gb|EEM89786.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|228927410|ref|ZP_04090467.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832306|gb|EEM77886.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|195588545|ref|XP_002084018.1| GD14030 [Drosophila simulans]
 gi|194196027|gb|EDX09603.1| GD14030 [Drosophila simulans]
          Length = 439

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 134/401 (33%), Gaps = 43/401 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR        P    Y   G      E+      +++++   GL  +        
Sbjct: 43  QLQELARKFTREEIIPVAAQYDKSG------EYP---WPIIKKAWELGLMNNHIPADIGG 93

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +         +A             +  S    + V L       K +  ++        
Sbjct: 94  LDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLL------- 146

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D++ I ++ +K  D         W  +  +++ + +L
Sbjct: 147 ------EEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEYVINGQKMWITNGGVANWYFVL 200

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    GL   R +  +G R++ T  + F +         N
Sbjct: 201 ARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVP---KEN 257

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   +  L EA+ YA  R   G  +     ++ 
Sbjct: 258 VLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQF 317

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +       A   D+ +  S         A I K     MA  + ++A++
Sbjct: 318 MLADMAIGVETSRLAWRLSAWEIDQGRRNS-------YYASIAKCHAADMANKIASDAVQ 370

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G+  E  + +  R++    I  G+     L +   +
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411


>gi|196043510|ref|ZP_03110748.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|229184564|ref|ZP_04311766.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|196025819|gb|EDX64488.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|228598881|gb|EEK56499.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|49479443|ref|YP_036455.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196033753|ref|ZP_03101164.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|196039887|ref|ZP_03107190.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|228933642|ref|ZP_04096492.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945958|ref|ZP_04108300.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229121901|ref|ZP_04251120.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|49330999|gb|AAT61645.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|195993433|gb|EDX57390.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|196029146|gb|EDX67750.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|228661550|gb|EEL17171.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201]
 gi|228813706|gb|EEM59985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826102|gb|EEM71885.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 569

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|309791992|ref|ZP_07686470.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308225986|gb|EFO79736.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 382

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 134/387 (34%), Gaps = 38/387 (9%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             A      L  +       D+    PA     R+     L    +   +          
Sbjct: 19  EFAEREIAPLARH------VDESGEFPA--ETFRKMAALDLMGLPFAEEWGGAGADAVST 70

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A               S  +   S  +A+       + +               P  +
Sbjct: 71  AIAIEEVARCCGSTAIAYSAHIGLGSAPIAMFGNDEQKERFLK-------------PAAQ 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                  GLTE   G+D  A  +      D         W  ++P++   I+ A  +   
Sbjct: 118 GKHMAAFGLTEPHAGSDAGATRTTAVLEGDEWVINGSKMWITNAPVAGHVIVTAVTDKEK 177

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM 312
           G   +  ++  G   G+ + + + K+G R + T  ++  N        L     G ++ +
Sbjct: 178 GKKGISAIIIPGGTPGMTFGKPEEKMGLRGSVTTAIQLENVRVPKENLLGERGKGFIQFL 237

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           ++   LD   + +  M V LA+     A+ YAR R   G  +     +   IAD+ + ++
Sbjct: 238 QV---LDGGRVGIGAMSVGLAQGAYEAAVQYARERESFGQPIGKHQSVANMIADMEVAVS 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L ++ A      K  + EAA       + K +  + +  V  +A++ +GG GY +E
Sbjct: 295 AARLLVYQAAWLKQLGKPYTREAA-------VAKLYASEASEKVCRDAIQIMGGYGYSQE 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454
             + R YR++   +I  G+   +   +
Sbjct: 348 FPVERMYRDTRLLTIGEGTSEILRNVI 374


>gi|56419851|ref|YP_147169.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261419522|ref|YP_003253204.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297530508|ref|YP_003671783.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319766338|ref|YP_004131839.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|56379693|dbj|BAD75601.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|261375979|gb|ACX78722.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297253760|gb|ADI27206.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317111204|gb|ADU93696.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 381

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 144/377 (38%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +   +   +G  C   D  +  +    A+ +             
Sbjct: 27  PHYNDWEKRGIIP--RSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +A   T    + W PK  + E             +   + +TE   G
Sbjct: 85  VGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    I++A + +   +     +  L+ + 
Sbjct: 132 SDLANISTTAVKDGD-YYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRGISLLVVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 191 DTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V  +    Y ++R   G  + +   ++  +A++A +IA       R+      
Sbjct: 251 AAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMA 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    E + A+        W  +MA  V AEAM+  GG GY+EE  IAR YR+ P ++I
Sbjct: 311 GKQIVTEVSMAKW-------WITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 364 YAGTNEMMKTIIARQLD 380


>gi|218778066|ref|YP_002429384.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759450|gb|ACL01916.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 604

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/452 (18%), Positives = 171/452 (37%), Gaps = 58/452 (12%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R++  +V     +H   R    DG      D                    + A 
Sbjct: 61  DKTGLRFENNQVFVPEVFHKPFRILAEDGWGSVTEDPDLGGQGLPTLIMQPIIEYLMGAC 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 ++    +  M+ L  T +  + +   ++S ++  T             + LTE 
Sbjct: 121 GVCLGYVTMGHGTGKMIELFGTDKQKELYLKNLYSAKWGGT-------------MVLTEA 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
             G+D+  +++  +K  DG Y ++G+K F++    D        +LA++EG       + 
Sbjct: 168 EAGSDVGNLSTTARKNDDGTYSITGNKIFITYGEHDLTENIIHPVLARIEGAPAGTAGIS 227

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
            F+VP++  +     G PN +    ++ K+G  +++T  L F       G+LLG+ N   
Sbjct: 228 IFIVPKIWVNDDGSLGEPNDVVCTGIEEKMGIHASSTCSLAFGGKGQCRGYLLGEENKGM 287

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L+      S   V+   A +YA+ R                  +I+ P 
Sbjct: 288 KVMFLMMNEARLNVGFQGFSAASVAYMYACNYAKERIQGRALEDSANKDAKPVAIINHPD 347

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYARIM----APITKYWCCKMA 408
           ++R +  +        +  + +A+ FD+ +     EEA     +     P+ K +C    
Sbjct: 348 VRRNLLTMKAYTDGMRSFIYYVADLFDKEELAESPEEADRFNKLIQLYTPVIKAYCTDKG 407

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLF 465
             + +  ++  GG GYI E  + +  R++   SI  G+     +D++     ++KG  +F
Sbjct: 408 FELASTGIQVYGGYGYISEYPMEQILRDAKIGSIYEGTNGIQAMDLIGRKLGMDKG-AIF 466

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
                 + + +  +  K +  L D  +  +  
Sbjct: 467 MSFMGEVAKTVAQA--KAVPGLEDMAAKVEAA 496


>gi|121603369|ref|YP_980698.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592338|gb|ABM35777.1| isovaleryl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
          Length = 393

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 139/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A  +  Q     P     DK +  P    L  +    G+        +   
Sbjct: 12  GEDIDALRDAVRDFAQAE-IAPRATEIDKSDQFPM--DLWEKMGALGVLGITVGEEYGGA 68

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH I    +   +        + S    + +    +    + + PK+ S E+   
Sbjct: 69  GMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIKRNGSEAQRQKYLPKLISGEH--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 126 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N        L    
Sbjct: 176 AKTEPELGARGVTAFLIEKGMPGFSVAQKLDKLGMRGSHTGELVFQNVEVPEQNILGNLN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVLPYIHDRKQFGQSIGEFQLIQGKVADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  + ++ +A + D     ++     R        WC + A  +  E ++  GG+G
Sbjct: 296 TVLQAGRSFAYTVAKNLDM--LGTDHVRQVRKDCASVILWCAEKATWMAGEGIQIYGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|94314827|ref|YP_588036.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93358679|gb|ABF12767.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 385

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 70/357 (19%), Positives = 132/357 (36%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       S+  +    + +                +   +V   S  + +  T   
Sbjct: 46  EMGLFGISIPESYGGIGLSMSQECDVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI S E             + I   LTE   G+D A++ ++     D       
Sbjct: 106 KQTYLPKIASGE-------------LIISFALTEPNAGSDAASLQTRADLDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGQGASGISSFIVPADTPGISLGKPDKKMGQRGTKTCDVV 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YA+ R 
Sbjct: 212 LENVRVPAANIIGGVPGVGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYAKERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   +      ++A  TK +
Sbjct: 269 QFGKPIGDFQLIQGMLADSQAELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E    R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQLIIAKQLLR 384


>gi|290961905|ref|YP_003493087.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651431|emb|CBG74553.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 399

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 132/376 (35%), Gaps = 33/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              E  D   F      L       GL    +D       +     ++       A+L  
Sbjct: 45  RAAEEEDASRFP---RELFGLLSESGLLGLPYDSEHGGGDQPYEVYLQVLEELAAARLTV 101

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S    +   +A   T     +  P +                 +     L+E   G
Sbjct: 102 GLGVSVHTLACHALANYGTKEQQVEHLPAMLGG-------------GLLGAYCLSEPASG 148

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++  +  D         W     ++D + ++A+  G  G   +   L  G   
Sbjct: 149 SDAASLRTKAVREGDEWVITGTKSWITHGGVADFYTVMARTGGE-GSRGITAFLVPGDAE 207

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
           GL     + K+G + + T +L F        GD        +   I +       L  A 
Sbjct: 208 GLSAAAPEKKMGMKGSPTAQLNFDGVRV---GDARRLGEEGQGFAIALSALDSGRLGIAA 264

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V   + +L EA+ YA  R   G  + D   ++  +AD+A    A  AL    A   D 
Sbjct: 265 CAVGVAQAALDEAVAYATGRQQFGRPISDFQGLRFMLADMATQTEAGRALYLSAARLRDA 324

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S++AA A+++       C   A  V  +A++ +GG GY  +    R+ RE+    I
Sbjct: 325 GRPFSKQAAMAKLL-------CTDAAMRVTTDAVQILGGYGYTADFPAERYMREAKVLQI 377

Query: 443 LLGSGNAMVLDVLNLL 458
           + G+     + +   L
Sbjct: 378 VEGTNQIQRMVIARHL 393


>gi|254701219|ref|ZP_05163047.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261751758|ref|ZP_05995467.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261741511|gb|EEY29437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 592

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 180/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR +T+ +
Sbjct: 497 SKAISEAREVTDWL 510


>gi|254497654|ref|ZP_05110436.1| acyl CoA dehydrogenase, short chain specific [Legionella
           drancourtii LLAP12]
 gi|254353128|gb|EET11881.1| acyl CoA dehydrogenase, short chain specific [Legionella
           drancourtii LLAP12]
          Length = 384

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 146/395 (36%), Gaps = 31/395 (7%)

Query: 67  SCTAQEL-ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   QE+ A  A++   +L    P  + WD     P    +LR +   G+   +      
Sbjct: 6   TEEHQEIRAMAADFARDKLA---PMADTWDDHSHFPI--DILREAAALGMAGMMAREDIG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +              +     +S      +++     P +   W PK+ +     
Sbjct: 61  GSQLTRLDSALLFEQLATGCISTSAYLSIHNMVTTVIDRYAGPELRAKWGPKLTAM---- 116

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
                     V     LTE   G+D A++ ++  K  D  Y L+G K F+S   + D ++
Sbjct: 117 ---------DVLSSYCLTEPESGSDAASLKTKAIKDGD-YYVLNGSKAFISGGSASDVYL 166

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGD 301
            + +  G      +  LL +    GL + +L+ K+G R+  T  L F N    +   +GD
Sbjct: 167 CMVRT-GDESHHGISCLLIEKDTPGLTFGKLEKKMGWRNQPTCMLYFENCRVPIVNRVGD 225

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +      +      ++ A  S+ G    L     Y R R      L D   ++   AD
Sbjct: 226 EGIGFKIALNALNGGRVNIASCSLGGALACLRLTQQYMRERRQFHKPLKDMQALRFYFAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D   A  + +R AN+ D    R      A +   + K     +A  +  +AM+  GG
Sbjct: 286 MLTDYENARLMVYRAANAMDNNDPR------APMYCAMAKRLATDVAFHISDKAMQLHGG 339

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GY+ +  I R +R+   + IL G+   M   +  
Sbjct: 340 YGYLRDYQIERIFRDLRVHQILEGTNEIMREIIAK 374


>gi|229030057|ref|ZP_04186121.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
 gi|228731227|gb|EEL82145.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271]
          Length = 569

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   D A   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDAAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|226941183|ref|YP_002796257.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716110|gb|ACO75248.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
          Length = 619

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/523 (17%), Positives = 185/523 (35%), Gaps = 62/523 (11%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD----KVE 98
             ++ N P       ++   Y+        A+   N   P   A    G  +D     V+
Sbjct: 46  QDILPNLPGYEDASADVFASYL-----DAAAKFCENELAPINRAADEEGCHYDAATKSVK 100

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +    ++    G      D ++      ++       +   A +        S  +
Sbjct: 101 TPAGFKEAYQQYCELGFTGLDCDPAYGGQGMPKSLAFPVMEMQCSANVAWSMYPGLSHGA 160

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S +    T      + P++    +  T             + LTE   GTD+  + ++ 
Sbjct: 161 YSAIHAHGTDEQKATYLPRLVDGSWTGT-------------MCLTEPHCGTDLGLLKTKA 207

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSP 267
           +  +DG Y ++G K F+S+   D       ++LA++         +  F+VP+ LEDGS 
Sbjct: 208 EPNADGSYSITGTKIFISAGEHDLSDNIIHLVLARMPDSPKDVKGISLFIVPKFLEDGSR 267

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    L++K+G ++NAT  +      G+L+G+ N     +  M     L   +  +  
Sbjct: 268 NPVSCGALEHKMGIKANATAVINLDGAKGWLIGEKNKGLACMFTMMNAARLGCGMQGLGI 327

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
              S   A+ YA+ R                  +I  P ++R +        A  AL+  
Sbjct: 328 GEASFQGALAYAKERLQMRALNGPACPDKPADPIIVHPDVRRMLMTQKAYTEAGRALTAF 387

Query: 376 LANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           LA   D  +  +++AA          + P+ K +            ++  GG G+I E  
Sbjct: 388 LALQLDIEEKSTDDAARQDAADTVALLTPVAKAFMTDNGFLAANMGVQVFGGHGFIREWG 447

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-----KK 482
           + +  R+   + +  G+     +D+L   +L        +    + +   ++      K+
Sbjct: 448 MEQLVRDCRISQLYEGTNGIQAIDLLGRKVLMDQGAKLRKFTKQIHKFCEANASNTQIKE 507

Query: 483 VITILRDSISLCKED---KGLARFLTEKIALASSAAALYRAGM 522
           ++  L        E     G+A  + +  A A++   L   G 
Sbjct: 508 LVEPLNALNKQIAEITMGIGMAAMMNKDEAGAAATDYLRLIGH 550


>gi|328875500|gb|EGG23864.1| putative acyl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 623

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 124/579 (21%), Positives = 232/579 (40%), Gaps = 62/579 (10%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHK----ELELLGEYVLS 67
             + Q         Q    +G N Y  DS L+ L+    P  V++    +L   G+ V+ 
Sbjct: 8   TSIRQRGYGRDFFQQESPRLG-NQYLEDSYLLELLPRVVPEKVYEQIKGDLTRFGDRVMG 66

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q   R +  N P+L  Y   G R  K+     W  L   S  +GL    ++R  +  
Sbjct: 67  DILQ-YGRASEANPPKLVQYDAWGRRVSKIIVDEGWKILQDISAQEGLVAIGYERPVQEY 125

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDP 185
            R      +  ++YL A   A      S+T   A ++ L     + +       +R+   
Sbjct: 126 SR----LYQYLKVYLFACSSAVFDCPLSMTDGGARLLELYGDKEMMQGPFKHFTTRDP-- 179

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI 244
             K             +TEK GG+D+A   +      DG  Y +SG+K+F S+  +++ I
Sbjct: 180 --KNFWTSGQWVKYTEMTEKTGGSDVANSETIAVGKGDGKNYDISGYKFFTSATTANSAI 237

Query: 245 MLAQVEGRV-------GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +LA+ +          G   +     +     G  N +   +LKNK G ++  T ELE  
Sbjct: 238 LLARDKESAESGFRAEGSRGLSAFYINIRDKQGELNNIIIHKLKNKFGTKAVPTAELELL 297

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
            T   L+G        +  +  +  + + I SV  MR S+A A  +A RR V    L + 
Sbjct: 298 ETPSRLIGAKGRGVPVIASILNITRIHNVIHSVGTMRRSVAIARDFAHRRMVFSSKLAEN 357

Query: 353 PVMKRAIADIALDIAAATALSFR----LANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
            +    +A++ +++ A           L  S   AK+   E +  RI+ P++K +  K +
Sbjct: 358 KLYLSTLAEMEIELRAGMQFFLDVTILLGKSECLAKNDQTE-SLLRILTPLSKLYTAKQS 416

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
             V +E MEC+GG+GY+E+  I R +R++   SI  G+ N + +DV   ++   +L + +
Sbjct: 417 ITVASEVMECLGGTGYMEDSDIPRLFRDTQVTSIWEGTTNVLSMDVWRSIKTHKSL-DVM 475

Query: 469 FSTLEQDLGSSGKKVITILRDSISL-CKEDKGLARFLT-------------EKIALASS- 513
              ++  +     +++      I+   K+ + +A+ +T             +     S  
Sbjct: 476 LDVVKNRINVPFPEILAFSHKVINDSLKQVEEMAKKVTVDGDIEFVESNAKKFAFFVSQV 535

Query: 514 --AAALYRAGM---------NDIADVFLENRFLDNCHST 541
             A+  +   +           +++ +   +   +   +
Sbjct: 536 YIASLFFEHALKSKRTNNIDAHVSNRWCFTKLQGSRSDS 574


>gi|326333802|ref|ZP_08200035.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325948384|gb|EGD40491.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 390

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 125/371 (33%), Gaps = 24/371 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+   +P         +           ++  V       +        A + A  + +
Sbjct: 36  VDEEARYP--QEAHDALVETEFFAPHVPEAYGGVGADALATVLVIEEIARADVSASLIPA 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   +  V +  +  + K +                +          L+E   G+D A 
Sbjct: 94  VNKLGSLPVQIGGSEELKKKYL-------------GALAAGQGNFSYCLSEPDAGSDAAN 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
             ++  +  D        +W  ++ +S+ + +LA  +       +   + + S  G+ + 
Sbjct: 141 QKTRAVRDGDFWVLNGVKRWITNAGVSEYYTVLAVTDPEKRSKGISAFVVEKSDEGVSFG 200

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             + K+G + + T E+ F N       L+G+                +  A  +V   + 
Sbjct: 201 APEKKLGIKGSPTREVYFDNVRIPADRLIGEEGKGFTYAMQTLDHTRITIAAQAVGVAQG 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ Y + R   G  + +   ++  +AD+ + I AA  L++  A   +         
Sbjct: 261 ALDYALGYIKERKQFGKPIAEFQGVEFMVADMGMKIEAARQLTYAAAGRSERGDKD---- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                     K +   +A  V  +A++ +GG G+  +  + R  R++    I  G+    
Sbjct: 317 --LTFFGAAAKAFASDVAMQVTTDAVQLLGGYGFTRDYPVERMMRDAKITQIYEGTNQVQ 374

Query: 451 VLDVLNLLEKG 461
            + +   L  G
Sbjct: 375 RIVMARQLLAG 385


>gi|306842316|ref|ZP_07474976.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306287573|gb|EFM59029.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 592

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/494 (17%), Positives = 181/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +     AA ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKAGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAID 376

Query: 382 EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + +     A      A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHATDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQNGDHIKGFLAELQDDADKAAASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|225852804|ref|YP_002733037.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256263711|ref|ZP_05466243.1| acyl-COA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225641169|gb|ACO01083.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263093768|gb|EEZ17773.1| acyl-COA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409336|gb|ADZ66401.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326539045|gb|ADZ87260.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 385

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 145/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+      +  + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEKQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMPGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 382


>gi|27366930|ref|NP_762457.1| Isovaleryl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
 gi|27358497|gb|AAO07447.1| Isovaleryl-CoA dehydrogenase [Vibrio vulnificus CMCP6]
          Length = 389

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 138/388 (35%), Gaps = 32/388 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAH 133
             AN +   L          D+    P    L  +    GLH       +    +   AH
Sbjct: 25  AFANEHIAPL------AADIDRANHFPDH--LWTKLGEMGLHGVTISEEYGGADMGYLAH 76

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    +   +   A    + S    + +      +    + P + S E+          
Sbjct: 77  VVAMEEISRASASVALSYGAHSNLCINQIYRNGNAQQKAHYLPALISGEH---------- 126

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++  + ++  D         W  + P +   ++ A+   + 
Sbjct: 127 ---IGALAMSEANSGSDVVSMQLKAKEKGDHFVLNGSKMWITNGPDAHTLVVYAKTNPKA 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   + + +  G    +  +K+G R + T EL F +       +LG++N     + 
Sbjct: 184 EAHGITAFIVERAFPGFHSAQKLDKLGMRGSNTSELVFEDCLVPKENVLGEINHGVRVLM 243

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  +  A   +  MR  L   I Y   R   G  + +  +++  +AD+   + AA 
Sbjct: 244 SGLDYERVVLAGGPLGIMRSCLDAVIPYIHDRKQFGQPIGEFQLVQGKLADMYTQMNAAR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  + +A + D  +   ++AA           +  ++A  +  +A++ +GG+GY+ E   
Sbjct: 304 SYVYTVAAACDRGEVTRKDAAG-------VILYSAELATRMALDAIQLLGGNGYVNEFPT 356

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R  R++    I  G+     + +   L
Sbjct: 357 GRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|227821069|ref|YP_002825039.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234]
 gi|227340068|gb|ACP24286.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234]
          Length = 593

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/514 (19%), Positives = 194/514 (37%), Gaps = 69/514 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            LGE ++     E  R A      L       G R     V+    W  L    I  G +
Sbjct: 30  ELGEDLVEAILSEAGRFATEEVAPLGEVGDRQGSRLVDGAVKTPEGWRDLYHDWIQGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                 +F        H +  A + +         + P++T  ++ A+    +  +   +
Sbjct: 90  GLTAPEAFGGQDLP--HMLHVAAMEMWNSGSMAFALGPTLTMGAIEAVEKHGSDALKATF 147

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             K+ S E+  T             + LTE   G+D+  + ++ ++ +DG Y + G K F
Sbjct: 148 LSKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRADGTYRIFGQKIF 194

Query: 235 LSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           ++    D       ++LA++         +  FLVP+ L +     G+ N L    L++K
Sbjct: 195 ITWGEHDFTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNADGSLGARNDLFCHSLEHK 254

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G   + T  + + +          G+L+G+ N     +  M     L   +  V+    
Sbjct: 255 LGIHGSPTCTMIYGDGRFGDEKGAIGYLVGEENRGLACMFTMMNNARLAVGMQGVAIAEA 314

Query: 331 SLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +AI YAR R               +I+ P + R +  +      A A+++  A++ D
Sbjct: 315 ATQKAIAYARERTQGRAPGWTGQGMSPIIEHPDIARTLLTMKALTQGARAIAYACAHAVD 374

Query: 382 EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A +   E A      + ++ PI K +       V +  ++  GG G+IEE   AR+ R+
Sbjct: 375 MAHASHSEKAHQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEETGAARYLRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQ-----LFSTLEQDLGSSGK----KVITIL 487
           +    I  G+     +D++    + +   +          +   + +S +    +    L
Sbjct: 435 ARIAPIYEGTNGIQAIDLVTRKLRLSEGAQVRGFIGELREVAHAVAASNRQGFGETAARL 494

Query: 488 RDSISLCKED-KGLARFLTE-KIALASSAAALYR 519
             SI+   +  + L   L E + A A + A  Y+
Sbjct: 495 EASIADLADATEWLLAALAEGRTAEALAGATAYQ 528


>gi|330954906|gb|EGH55166.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 592

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/493 (17%), Positives = 172/493 (34%), Gaps = 53/493 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAPAGTDLGMIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVADDGSIGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQA 314

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A+ YA+ R  S               +I  P ++R +  +        A S  +A   D 
Sbjct: 315 AVEYAQDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDI 374

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           AK   ++AA         ++ P++K +   +         +  GG GYI      +  R+
Sbjct: 375 AKFSEDDAARKRADDLVALLTPVSKAFLSDIGLETTVHGQQVFGGHGYIRGWGQEQLVRD 434

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+     LD++     G+N   ++     + Q +  S   +    +      
Sbjct: 435 VRITQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFISGSDNALGEFTQPLSKAL 494

Query: 495 KEDKGLARFLTEK 507
                L  ++ ++
Sbjct: 495 NMLDELTGWVLDR 507


>gi|302541026|ref|ZP_07293368.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458644|gb|EFL21737.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 390

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 78/411 (18%), Positives = 142/411 (34%), Gaps = 35/411 (8%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
           + P  V +EL        +  A++L  +    T +     P     +     P    L  
Sbjct: 4   HGPQPVERELP-------TEEARDLISLVRELTER--EIRPRAAEEEAAGHFP--RELFT 52

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                GL   ++   F    +     ++       A+L  G  +S    S   +A   T 
Sbjct: 53  LLSESGLLGLVYPEEFGGGDQPYEVYLQVLEELAAARLTVGLGVSVHTLSCHGLAGYGTK 112

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
               +  P +                 +     L+E   G+D AA+T++  +  D     
Sbjct: 113 EQLAEHLPAMLGG-------------GLLGAYCLSEPSSGSDAAALTTRATREGDTWTLE 159

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            G  W     ++D + +LA+         +   L  G   GL     + K+G   + T +
Sbjct: 160 GGKAWITHGGIADFYTVLARTGPER-TRGISAFLVPGDAPGLSAAAPERKMGMNGSPTAQ 218

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +            +G+                L  A  ++   + +L EA+ Y  +R   
Sbjct: 219 IHLDRVRVPDTRRIGEEGQGFAIALSALDAGRLGIAACAIGLAQAALDEALAYTAQRRQF 278

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D   ++  +AD+A  I A  AL    A   D  +  S++AA A       K +C 
Sbjct: 279 GRPIADFQGLRFMLADMATQIEAGRALYLAAARLRDAGRPFSKQAAMA-------KLFCT 331

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A  V  +A++  GG GY  +  + R+ RE+    I+ G+     + +  
Sbjct: 332 DTAMRVTTDAVQLFGGYGYTADFPVERYMREAKVLQIVEGTNQIQRVVIAR 382


>gi|225677560|gb|EEH15844.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 439

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+ E  HPA   ++ +    GL        F          I        
Sbjct: 78  EQIGPKVRDMDEAEAMHPA---VIEQLFEQGLMGVEIPEEFGGAGMNFTSAIVGIEELAR 134

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  L     T   + +       + K W P++               T       L
Sbjct: 135 VDPSVSVLCDVHNTLVNTAILRFADAAIKKKWLPRL--------------ATDTVGSFCL 180

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D  A+ ++  K S G        W  +S  +  FI+ A ++   G   +   +
Sbjct: 181 SEPASGSDAFALQTKAVKTSSGYKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFI 240

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +    G    + + K+G R+++T  L F +        + V     +    L  L+   
Sbjct: 241 VEKGTPGFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLIGVEGQGYKYAINL--LNEGR 298

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  +A    +IAAA AL F  
Sbjct: 299 IGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVFNA 358

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 359 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGSAVEWMGGMGFVREGIAEKMFRD 411

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  LL+K
Sbjct: 412 SKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|254506633|ref|ZP_05118774.1| isovaleryl-CoA dehydrogenase,   (IVD) [Vibrio parahaemolyticus 16]
 gi|219550506|gb|EED27490.1| isovaleryl-CoA dehydrogenase, (IVD) [Vibrio parahaemolyticus 16]
          Length = 389

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 146/401 (36%), Gaps = 38/401 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             +   A+ +        P  ++ DK    P  + L       GL       SF      
Sbjct: 21  DHVGAFADQH------IAPIADQIDKDNQFP--NHLWPLLGDMGLLGITTSESFGGAGMG 72

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH +    +   +   A    + S    + +    T      + PK+           
Sbjct: 73  YLAHVVAMEEISRASASVALSYGAHSNLCVNQIFRNGTQEQKAKYLPKLIDG-------- 124

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                S    L ++E   G+D+ ++  +     D         W  + P +D  I+ A+ 
Sbjct: 125 -----SAIGALAMSEPNAGSDVVSMQLKATLNGDHYRLNGNKMWITNGPDADVIIVYAKT 179

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + + + +G  + +  +K+G R + T EL F++    +   L      V
Sbjct: 180 DSSAGSHGITAFIVERAFSGFSHAQRLDKLGMRGSNTCELVFNDCLVPVENVLGEVNKGV 239

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           + +   +  +  +++   +  M+  L   I Y   R   G  + +  +++  +AD+    
Sbjct: 240 QVLMSGLDYERVVLAGGPLGIMQACLDLVIPYVHERKQFGKAIGEFQLVQAKVADMYTRT 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA +  + +A + D  ++  ++AA           +  ++A  +  +A++ +GG+GYI 
Sbjct: 300 NAARSYVYTVAAACDRGEATRKDAAG-------VILYSAELATQLALDAIQLLGGNGYIN 352

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           E    R  R++    I  G+           +  G  LFE+
Sbjct: 353 EFPAGRLLRDAKLYEIGAGTSEI------RRILIGRELFEE 387


>gi|163741877|ref|ZP_02149267.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161385050|gb|EDQ09429.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 568

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/495 (18%), Positives = 181/495 (36%), Gaps = 46/495 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA-------YGPGGERW 94
           LL  ++               + V++    E  +  +     L+        +   G   
Sbjct: 13  LLNHIVGYSDISATDRFSEASDDVVTAILTEAGKFCDEVMAPLNRGGDLQPAHLENGV-- 70

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
             +   P +    +     G        +F  +            +   A L        
Sbjct: 71  --LRTSPGYAEGWQAISEGGWIGMSASEAFGGMGLPMTLTTAVNEMMSGACLSLQLAPLM 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +  +   + PK+ S E+  T             + LTE + G+D+ A+
Sbjct: 129 SQGQIEALEHHASDEIKSLYLPKLISGEWSGT-------------MNLTEPQAGSDVGAL 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLE 263
           +S+   + DG Y +SG K ++S   +D       ++LA++         +  FLVP+ L 
Sbjct: 176 SSKADPLDDGTYAISGQKIYISWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLP 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           D     G  N L    L++K+G   + T  +++    G+++G        +  M     L
Sbjct: 236 DADGNPGKANDLKVVSLEHKMGLHGSPTCVMQYDGAIGWMIGQPGGGLAAMFTMMNNARL 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSG---GILIDQPVMKRAIADIALDIAAATALSFR 375
                 V     +  +A+ YA  R       G ++D   ++R + ++  D+ AA A+   
Sbjct: 296 GVGGQGVGIAGAAYQKALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLA 355

Query: 376 LANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + + D   A +  E AA A  + PI K +  +    V    ++  GG G+IEE   A+ 
Sbjct: 356 CSQAIDMQTATATQEWAARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQF 415

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           YR+    +I  G+     +D++   +  G ++  +L   +E+    +      +      
Sbjct: 416 YRDVRVTAIYEGTNGIQAMDLVGRKMMDGGDMAHRLIDEIEEQAERARTTHPNMAEAVWQ 475

Query: 493 LCKEDKGLARFLTEK 507
            C+  +    +LT +
Sbjct: 476 ACESLREATEWLTAQ 490


>gi|170700791|ref|ZP_02891783.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170134318|gb|EDT02654.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 377

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDHDAHLPD--AVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    +     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 114 ---MAAGRIIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|118589350|ref|ZP_01546756.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118438050|gb|EAV44685.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 598

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/559 (18%), Positives = 189/559 (33%), Gaps = 97/559 (17%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG------ERWDKVEFHP 101
           +N P      L+     ++    +E  + A      L      G         D     P
Sbjct: 25  SNLPGFADAPLD-----LVEAILREGGKFAEE---VLQPLNQTGDNEGCTHNEDGSVTTP 76

Query: 102 -AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             +    +    +G      D ++        H +        +       M P +T+ +
Sbjct: 77  TGFLKAYKAFCENGWGTLSADPNYGGQGLP--HTLTTIFNEFASSANMAFSMYPGLTAGA 134

Query: 161 MVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           + AL    T    + + P + +  +  T             + LTE   GTD+  I ++ 
Sbjct: 135 VAALTIHGTDEQKQTYLPNMIAGTWTGT-------------MNLTEPHCGTDLGLIRTKA 181

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV-GCFLVPRLLED-------- 264
              +DG Y ++G K F+S+   D       ++LA++EG   G   +   +          
Sbjct: 182 VPQADGSYKITGTKIFISAGQHDMAENIIHLVLARIEGAPEGTKGISLFVVPRNAIGDDG 241

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  NG+    +++K+G   NAT  + + +  G+L+G+ N     +  M     L  A+
Sbjct: 242 TVGDNNGVSCGSIEHKMGIHGNATCVMNYDDATGWLVGEENKGLRAMFTMMNEARLGVAV 301

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT 370
             +S   V+   A+ YA+ R                  +I  P ++R +  I     AA 
Sbjct: 302 QGLSQSEVAYQNAVTYAKDRIQGRALTGPKAPDKPADPIIVHPDVRRTLMQIRSFNEAAR 361

Query: 371 ALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL    A      +  D+ KS+        +M P+ K        A    A +  GG GY
Sbjct: 362 ALIIWTALHGDVSHRSDDEKSKQFSDDMMGLMTPVLKGVLTDTGFANAVNAQQLYGGHGY 421

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           I E  + +  R++    I  G+     LD++                L  + G +     
Sbjct: 422 ISEWGMEQFVRDARIAMIYEGANGIQALDLVG-------------RKLPANGGRAVMSFF 468

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV---FLENRFLDNCHST 541
             +   +   K+++ LA F               + GM+D+      F+ N       + 
Sbjct: 469 NEVNTFLKENKDNEALAAFTAP-----------LKKGMDDLQAATMWFMNNAM----KNP 513

Query: 542 HCMLHGRFNAAHIIDSLYL 560
                G  +  H+   + +
Sbjct: 514 DNAGAGSVDYMHLFGLVAM 532


>gi|89901524|ref|YP_523995.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89346261|gb|ABD70464.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 387

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/393 (18%), Positives = 134/393 (34%), Gaps = 36/393 (9%)

Query: 87  YGPGGERWDKVE--FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                   DK    FH  W        A+ R++  +G  C      +      + + +  
Sbjct: 15  RDSFRRFIDKEIAPFHADWEEQGYVDRAVWRKAGENGFLCMTMPEEYGGAAADKLYSVVQ 74

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                 A          S   A  V    T    K +  K+ S E               
Sbjct: 75  LEEIGRAGFTGIGYGLHSEIVAPYVLHYGTEEQKKRYLRKLASGEM-------------I 121

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF 256
             + ++E   G+D+  I +   + SDG Y L+G K F+++   +D  I++A+     G  
Sbjct: 122 GAIAMSEPAAGSDLQGIKATAIRQSDGSYLLNGSKTFITNGWHADLVIVVAKTNPAAGAK 181

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG------DLNVSTGPVE 310
               LL +    G    +   K+G ++  T EL F N               N     + 
Sbjct: 182 GTSLLLVERGMAGFSVGKRLKKMGMKAQDTSELFFDNVRVPADNLLGGPAHENRGFICLM 241

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +      L  AI +++  + ++   + Y + R V G  +      +  +A++  ++  A 
Sbjct: 242 EQLPWERLQIAIGAIAASQAAIHWTVDYVKERKVFGQPVAAFQNTRFTLAELQTEVQIAQ 301

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +           +  A+ A       KYWC  +   V+ E ++  GG GY+ E  I
Sbjct: 302 VFIDKCTELLMTNTLDTATASMA-------KYWCSDLQCKVMDECVQLFGGYGYMWEYPI 354

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            R Y ++    I  G+   M   +   +  G  
Sbjct: 355 TRAYVDARPQRIYGGTNEIMKEVITRAMGLGGK 387


>gi|260549812|ref|ZP_05824028.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260407062|gb|EEX00539.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 390

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      + K   E AA A     
Sbjct: 278 TKDRKAFGKPISAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|167895105|ref|ZP_02482507.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
          Length = 430

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 117/425 (27%), Positives = 193/425 (45%), Gaps = 33/425 (7%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V  +AME  GG+GYIEE S 
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSD 425

Query: 431 ARHYR 435
           AR  R
Sbjct: 426 ARVLR 430


>gi|326796145|ref|YP_004313965.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
 gi|326546909|gb|ADZ92129.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
          Length = 600

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/479 (17%), Positives = 168/479 (35%), Gaps = 71/479 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLHC 117
            +++   +E A+ A      L      G+         +V     +    ++ +  G   
Sbjct: 37  DMVAAILEEGAKFAER---VLSPLNRIGDEQGCTFKDGEVTTPEGFKEAYQQYVEGGWPS 93

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              + S       ++  +    +   +          S  + + +    T    + +  K
Sbjct: 94  LSHEESVGGQGLPESLGMMVTEMIATSNWSWSMYPGLSHGAMNTLEQHGTDEQKQTYLTK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + + E+  T             + LTE   GTD+  + ++ +  SDG Y +SG K F+S+
Sbjct: 154 LVTGEWTGT-------------MCLTEPHCGTDLGMLKTKAEPNSDGSYAISGTKIFISA 200

Query: 238 PMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       I+LA++         +  F+VP+   +        N +    +++K+G 
Sbjct: 201 GEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFNVNETGDVADRNAVSCGSIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + F    GFL+G  N     +        L +A+  ++    +   ++ YA+ 
Sbjct: 261 HGNATCVMNFDGAKGFLIGPPNRGLNCMFTFMNTARLGTALQGLAHAEWAYQNSVVYAKD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           R                  +I  P ++R +           AL    +   D+    S+E
Sbjct: 321 RLQMRALSGAKSPDKAADPIIVHPDVRRMLLTQRAFAEGGRALIHYSSLLVDKTTKGSDE 380

Query: 390 AAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      + PI K +  +       + ++  GG G+I E  + ++ R+S  + +  
Sbjct: 381 EKAEAEELLSLLTPIAKAFLTETGFESANQGLQVFGGHGFIAEWGMEQNVRDSRISMLYE 440

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           G+     LD+L                +    G++ ++   I+      CKE KG  RF
Sbjct: 441 GTTGIQALDLLG-------------RKVLMTQGATLRRFTKIIH---KFCKEHKGDKRF 483


>gi|52143125|ref|YP_083705.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51976594|gb|AAU18144.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 569

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDIANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|26990204|ref|NP_745629.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985147|gb|AAN69093.1|AE016543_2 acyl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 383

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 131/358 (36%), Gaps = 26/358 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           R+    GL   +    F            A           G +MS   +      L   
Sbjct: 44  RKMGELGLLGMVVPEDFGGSYTDYVAYALAVEEISAGCGATGAMMSIHNSVGCGPLLAYG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             V     LTE + G++   + ++ + + DG +
Sbjct: 104 TAEQQQQWLPRLASGE-------------VIGCFCLTEPQAGSEAHNLRTRAELV-DGQW 149

Query: 227 CLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+       I+ A  +  +G   +   L      G    R ++K+G R++ 
Sbjct: 150 VINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVPTDNPGFKVDRSEHKMGIRASD 209

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F N        L     G    +  L    +  A  ++   R +   A+ Y+R R
Sbjct: 210 TCAVTFDNCRIPAANILGERGKGLAIALSNLEGGRIGIAAQALGIARAAFEAALVYSRDR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   +   +AD+ + + AA  L    A      K    E       A   K 
Sbjct: 270 IQFGKPINEHQSIANLLADMQVQVNAARLLILHAARLRSAGKPCLSE-------ASQAKL 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +MA  V + A++  GG GY+E+  + R+YR++    I  GS     + +   L+ 
Sbjct: 323 FASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRMLIARELKN 380


>gi|297618236|ref|YP_003703395.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297146073|gb|ADI02830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 151/398 (37%), Gaps = 39/398 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q LAR    N        P     D+    P    +++++   GL        +  + 
Sbjct: 12  EMQALARKFTRNE-----IIPVAAELDRKSEMP--WDIIKKAFEIGLWNFNLPAKYGGLE 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                +           L        +  + + + +  T      W P+           
Sbjct: 65  LDHVTEAILVEEIAYGCLGVSGAWDGNTLALTPILIAGTEEQQDRWLPQF---------- 114

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
               +  V     LTE   G+D +++ +  +K+ D  Y L+G K F++   +++ + + A
Sbjct: 115 ---GEAPVLAAFCLTEPNAGSDASSMNTFARKVGDE-YILTGTKCFITHGGIANMYTVFA 170

Query: 248 QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +    G   +   L  G   GL   ++++K+G+R++   E+ F            +  
Sbjct: 171 KTDRSVKGTKGISAFLVPGDAPGLSMGKVEDKMGDRASHIAEVIFDEVRVPARD---LLG 227

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E  KI +  LD   MS+    V        EA++YA++R   G  +  Q  +   +A
Sbjct: 228 KEGEGFKIAMQTLDRTRMSIGAAAVGVARRAYEEALNYAKQRVQFGKPIASQQAIAFMLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I AA AL ++ A   D      +  A A       K +   +A  V  +A++ +G
Sbjct: 288 DMATEIEAARALVWKAAWEIDHGNPDPKLGAMA-------KLYAGDVAMKVAVDAVQVLG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY++E  + +  R++    I  G+     + +   +
Sbjct: 341 GYGYMKEYPVEKLMRDAKILQIYEGTQQIQRVVISGRI 378


>gi|167768304|ref|ZP_02440357.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1]
 gi|167709828|gb|EDS20407.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1]
 gi|291560280|emb|CBL39080.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 134/362 (37%), Gaps = 28/362 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMV 162
              ++    G     + + +          + A      + + +   + +  S+ S +++
Sbjct: 40  EAYKKMGEMGFVGLPFPKEYGGQGGDYLSYVLALEEISKINSSVGIAYSVCTSLYSGALI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P++ S                     LTE   G+D A   +      
Sbjct: 100 -NDGNEEQKKKYLPEVLSG-------------KKMGSFCLTEPDAGSDAAGCKTTAIWNG 145

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y L+G K F+++  ++D ++++A     +    +   + +    G+   ++++K G 
Sbjct: 146 KE-YILNGLKCFITNGPLADYYMVVALTNPELKTKGLTAFIVEREWEGVSIGKIEDKCGI 204

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           R     E+ F N        L     G    MK L    +  A   +   + +   A +Y
Sbjct: 205 RCAQVSEVIFDNVRVPKENMLGEEGKGFAVAMKDLDGGRIGVAAQGLGIAKGAYDIAFNY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  L     +   +A++  +I  A  + ++ A    E +S S  AA A+++  
Sbjct: 265 LKEREQFGKPLYKNQYLAFKMAELETEIEMAQYMLYKAATDKQEGRSYSVPAAKAKMV-- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                C   A  V  EA++ +GG+GY++E  + R  R++    I  G+     L +   +
Sbjct: 323 -----CTDAAMHVATEAVQMLGGNGYMKEYHVERMLRDAKITQIYEGTNEIQKLVISGNM 377

Query: 459 EK 460
            +
Sbjct: 378 FR 379


>gi|226958412|ref|NP_002216.2| isovaleryl-CoA dehydrogenase, mitochondrial isoform 1 precursor
           [Homo sapiens]
 gi|119612819|gb|EAW92413.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|119612821|gb|EAW92415.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
          Length = 426

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 126/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D+           ++  + G+        +         H +    +   
Sbjct: 62  EHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 121

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 122 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 168

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 169 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 228

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 229 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 288

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 289 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 348

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 349 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 401

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 402 LYEIGAGTSEVRRLVIGRA 420


>gi|328881069|emb|CCA54308.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 392

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 129/363 (35%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL    +D ++    +     ++       A+L  G  +S    S   +A
Sbjct: 48  RELFALLSRSGLLGLPYDPAYGGGGQPYEVYLQVLEELAAARLTVGLGVSVHSLSCHALA 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T        P +                 +     L+E   G+D AA+ ++  +  D
Sbjct: 108 RYGTEEQRAAHLPAMLGG-------------GLLGAYCLSEPHAGSDAAALRTRAVRDGD 154

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G          W     ++D   ++A+  G  G   V   L  G   GL     + K+G 
Sbjct: 155 GGDWVIDGTKAWITHGGIADFCTVMART-GGAGARGVTAFLVPGDAPGLSAAPPERKMGM 213

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           + + T +L F         D        +   I +       L  A  +V   + +L EA
Sbjct: 214 KGSPTAQLHFDGVRVP---DERRLGAEGQGFAIALDALDSGRLGIAACAVGLGQAALDEA 270

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  + D   ++  +AD+A  + A  AL    A   DE +     AA A  
Sbjct: 271 VGYAKERRQFGRPIADFQGLRFLLADMATQVEAGRALYLEAARLRDEGRPFGRCAAMA-- 328

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C   A  +  +A++ +GG GY  +  + R+ RE+    I+ G+     + + 
Sbjct: 329 -----KLFCTDAAMRITTDAVQVLGGYGYTADFPVERYLREAKMLQIVEGTNQIQRVVIA 383

Query: 456 NLL 458
             L
Sbjct: 384 RHL 386


>gi|226306262|ref|YP_002766222.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226185379|dbj|BAH33483.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 137/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQ 145
           P  E+W++  +     W      +   G   +     F    V+   +            
Sbjct: 27  PNHEKWEEQNIVDRDVWVE----AGKQGFLGTAVPEEFGGGGVKDFRYNAIITEETTKGG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                    +   A  +  ++     + W P   S E             +   + +TE 
Sbjct: 83  FSGIGFTLHNDVVAPYLLELSNEEQKQRWLPGFASGE-------------LISAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+  I ++  +  D  + L+G K F+++ + +D  I++A  +   G      L+ +
Sbjct: 130 GTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGFSLLVVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G    R  +KIG ++  T EL F++        L     G    MK L    L  A
Sbjct: 189 RDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNLPQERLSIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++ + M   L   I Y R R   G  +      +  +A++A +  A   L  +     +
Sbjct: 249 VVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELATETTAVRILVDKFIEQLN 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A+        W  +    +I   ++  GG GY++E  +A+ Y +S   +
Sbjct: 309 AEKLTVQEAAMAKW-------WTTEAQVKLIDRCLQLHGGYGYMKEYPVAKAYMDSRVQT 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 362 IYGGTTEIMKEIIGRSL 378


>gi|310791087|gb|EFQ26616.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 424

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 147/415 (35%), Gaps = 38/415 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F +    +L  L E V   T +E+      NT             DK    P  + + ++
Sbjct: 38  FEAPSQADLTELRERVQEFTRREITEEVAANT-------------DKSNAFP--NDMWQK 82

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      D     +    QAH +    +   +        + S    + + L  +P
Sbjct: 83  LGEAGFLGMTADEEVGGLAMGYQAHCVVMEEISRASGSIGLSYAAHSQLCVNQLQLNGSP 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P + +              +    L ++E   G+D+ ++      +  G    
Sbjct: 143 EQKQKYLPGLIAG-------------TSVGALAMSESGAGSDVVSMRMTATAVDGGHVLN 189

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E   G   V   + +    G    R  +K+G R + T E
Sbjct: 190 GSKMWITNGPDADVIVVYAKTEPDKGSKGVTAFIVETKAKGFSCARKLDKMGMRGSNTGE 249

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F + F     +LG +N     + +   L  L  +   +  M+ +L  A+ +  +R   
Sbjct: 250 LNFDSVFVPKENVLGKVNGGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQF 309

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     ++  +AD+   + A+ A ++  A + D      EE             +  
Sbjct: 310 GIPIAQNQFIQGKLADMYTKLQASRAYTYSTAKAVD------EEGLIRTQDCAGAILYAA 363

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + A     ++++ +GG GY+EE   +R  R++    I  G+     + +     K
Sbjct: 364 ERATECTLDSIQLLGGMGYVEEMPASRLLRDAKLYEIGAGTSEIRRMVIGRAFNK 418


>gi|239830878|ref|ZP_04679207.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823145|gb|EEQ94713.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 403

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 139/402 (34%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 26  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGITAPEDYG 81

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P   + + PK+ S E+ 
Sbjct: 82  GAGMGYVAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPGQREKYLPKLISGEH- 140

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  +         W  + P +D  +
Sbjct: 141 ------------VGALAMSEPGAGSDVVSMKLHAEKRGERYILNGNKMWITNGPDADVLV 188

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + + +  G    +  +K+G R + T EL F +        L  
Sbjct: 189 VYAKTDPSAGPRGISAFIVEKTFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 248

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 249 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 308

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A ++ +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 309 MYVTFNASRAYTYAVAAACDRGETSRKDAAG-------CILYTAENATQMALQAIQALGG 361

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 362 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 403


>gi|17988206|ref|NP_540840.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|17983970|gb|AAL53104.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 382

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAMAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|83942684|ref|ZP_00955145.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83846777|gb|EAP84653.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 387

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 143/402 (35%), Gaps = 33/402 (8%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +L    N     +H +      P     D K EF PA   L       GL     +  F 
Sbjct: 9   DLGDDVNEMRDMVHRWAQERVKPMAAEIDTKNEFPPA---LWEEMGSLGLLGMTVEEEFG 65

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH +    +   +   +    + S    + + L  +P     + P + S ++ 
Sbjct: 66  GSGMGYVAHTVAVEEIARASASVSLSYGAHSNLCVNQIRLNGSPEQKAKFLPGLCSGQH- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++  + +K +D         W  + P +D  +
Sbjct: 125 ------------VGALAMSEPSAGSDVVSMKLRAEKRNDHYRLSGNKYWITNGPDADTLV 172

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG+
Sbjct: 173 VYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGE 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +        +  A + +  M   L E + Y   R   G  + +  +M+  +AD
Sbjct: 233 EGRGVAVLMSGLDYERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIGNFQLMQGKMAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + +A A  + +A + D       +AA           +  + A     +A++ +GG
Sbjct: 293 MYTAMNSARAYVYEVAKACDRGDVTRADAA-------ACCLYASEEAMKQAHQAVQAMGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GY+ +  + R +R++    I  G+     + V   +     
Sbjct: 346 AGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLVGREMMGAMA 387


>gi|229178697|ref|ZP_04306061.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|228604855|gb|EEK62312.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 569

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 155/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+ +  +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTDKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|158522511|ref|YP_001530381.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511337|gb|ABW68304.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 147/377 (38%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+   +PA    L++    G    +    +        A+ +  + +       
Sbjct: 26  PLAAERDRTHEYPA--DSLKKMGDLGFLGMLVSEKYGGENAGTVAYSLALSEIACACAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +   +      +    T    +++               PM   +      LTE   
Sbjct: 84  AVIMSVHNSICCGSIEKYGTEEQKEEFL-------------RPMAAGAFIGAFALTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+T    +  D  Y ++G K F++S  +   ++L       G   +   L     
Sbjct: 131 GSDPQAMTCTAVRDGDH-YIINGTKRFITSGKNGGVVILLARTAEKGSRGISAFLVTHDF 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G    R+++K+G  ++ TV+L F++        L       E  KI +  LD+  + ++
Sbjct: 190 AGFSVGRIEDKMGQCASDTVDLLFNDCRVPASRMLG---SEGEGFKIAMSGLDAGRIGIA 246

Query: 327 -----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                  + +L E+I Y+R R   G  L     ++  IAD+A+D+ AA  L    A   +
Sbjct: 247 SLSLGIAQAALDESIRYSRNRKQFGQNLSGFQGLRWMIADMAMDVEAARLLVLNAAAVKE 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++ +  A+ A+        +  +MA  V  +A++  GG GYI+E  + R YR++   +
Sbjct: 307 HGENCTAAASMAKC-------YASEMAQRVTGQAIQIHGGYGYIKEYPVERFYRDARITT 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + + N L
Sbjct: 360 IYEGTNQIQRIVIANEL 376


>gi|15599394|ref|NP_252888.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9950410|gb|AAG07586.1|AE004836_5 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 593

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 86/523 (16%), Positives = 179/523 (34%), Gaps = 63/523 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L   I  +    +S   A+ YAR R  S               +I  P 
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R +  +        A          LA   ++ + RS+  A   ++ P+ K +     
Sbjct: 347 VRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
                   +  GG GYI E    +  R+     I  G+     LD++   ++  G     
Sbjct: 407 LESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLS 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                +      +  ++   +   ++       L + +  +  
Sbjct: 467 IFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARAG 509


>gi|169794622|ref|YP_001712415.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213158807|ref|YP_002320805.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482211|ref|YP_002324393.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239503206|ref|ZP_04662516.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301348160|ref|ZP_07228901.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513378|ref|ZP_07238615.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595212|ref|ZP_07240220.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB059]
 gi|332853167|ref|ZP_08434604.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868587|ref|ZP_08438243.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147549|emb|CAM85410.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213057967|gb|ACJ42869.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213986364|gb|ACJ56663.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332728836|gb|EGJ60195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733264|gb|EGJ64458.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 390

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      + K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|47565708|ref|ZP_00236748.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
 gi|47557344|gb|EAL15672.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus
           G9241]
          Length = 569

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|332993525|gb|AEF03580.1| isovaleryl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 389

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 138/361 (38%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           AL  +    GL        +        AH I    +   +        + S    + + 
Sbjct: 47  ALWPKLGEMGLLGVTVSEQYGGADMGYLAHTIAMEEVSRASAGVGLSYGAHSNLCVNQIF 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + PK+ S E+                L ++E   G+D+ ++  + QK  D
Sbjct: 107 RNGNDEQREKYLPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLRAQKRGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  F++ A+ + + G   +   + +    G    +  +K+G RS
Sbjct: 154 KYILNGNKMWITNGPDAHTFVIYAKTDPQAGPKGITAFIVERDFPGFTRAQKLDKLGMRS 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIH 337
           + T EL F +         N+     E +++L+  LD   + +SG     M+  +   + 
Sbjct: 214 SNTCELVFQDCEVPA---ANILGKEGEGVRVLMSGLDYERLVLSGGPLGIMQACMDVVVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + AA A  + +A S D   +  ++AA A    
Sbjct: 271 YIHDREQFGQSIGQFQLVQGKVADMYTQMNAARAYVYTVAKSCDRGDTTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GYI E S  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYINEYSTGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|326319041|ref|YP_004236713.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375877|gb|ADX48146.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 376

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/394 (21%), Positives = 146/394 (37%), Gaps = 27/394 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   RWDK    P       R  H GL       ++   V
Sbjct: 5   QDQEMIRDAVRDFAQTELW-PHAARWDKEHLFP-------RDAHRGLAALG---AYGICV 53

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++        L L   LE         ++A  V       +   +  +   R +     
Sbjct: 54  PEEHGGAGLDYLSLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGSEAQKRRWLE--- 110

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLA 247
            P+ +  +     LTE   G+D +A+ +   +  D  Y + G K F++S  +    I++A
Sbjct: 111 -PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVIA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
             +   G   +   +      G    RL++K+G  S+ T ++ F      +   +G    
Sbjct: 169 VTDRAAGKRGMSAFIVPTDTPGYVVARLEDKLGQHSSDTAQILFEGCRIPVENRIGAEGE 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  SV   R +   A+ YA+ R   G  +     +   +AD A 
Sbjct: 229 GYKIALGALEGGRIGIAAQSVGMARSAFDVAVQYAKERESFGQPIFQHQAVGFRLADCAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +  A   D  +   +EAA A       K +  +MA  V + A++ +GG G 
Sbjct: 289 QLEAARQLIWHAAALRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGV 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VNDFPVERIYRDVRVCQIYEGTSDVQKILITRAL 375


>gi|326433236|gb|EGD78806.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 634

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/495 (17%), Positives = 170/495 (34%), Gaps = 64/495 (12%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW 94
            +  D +L     ++    ++E     E + +   +E A+ A      L+      G + 
Sbjct: 35  QFVIDEVLEG-DRHYVKAGYEECN---EELRASVVEECAKFAEDVLSPLNKVGDEEGAKH 90

Query: 95  D----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           D     V+    W          G        ++       +  +  A L+  A    G 
Sbjct: 91  DPKTKDVKTPTGWKEAYESYAALGWQGLSVPEAYGGQGLPTSLNMVKAELFATANWTWGM 150

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               S+   + + L  +    + + PK+    +  T             + LTE + GTD
Sbjct: 151 FPGLSIGCMNTLILCGSEEQKQKYLPKLADGTWLGT-------------MCLTEPQCGTD 197

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVP 259
           +  + ++  K  DG Y L+G K F+S    D       I+LA+ E        +  FLVP
Sbjct: 198 LGQVKTKAVKQGDGSYKLTGTKIFISCGEHDFTENIVHIVLARTENSPAGTKGLSLFLVP 257

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           + LE+          +    +++K+G   + T  + F +T G+L+G        +     
Sbjct: 258 KYLENSDGSLSKEKNVTCGSIESKMGIHGSPTCVMHFEDTVGYLIGQEFKGLEQMFVFMN 317

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRR---------HVSGG---ILIDQPVMKRAIADI 362
              + +A+  +    ++    + YAR R                  +I    ++R +   
Sbjct: 318 TARIGTALQGLGAAELAFQGGLTYARDRGSMRALSGTKAPEKVADPIIHHGDVRRMLLTC 377

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                 A  + + ++   D       EA           + PI K    ++        +
Sbjct: 378 KAVAEGARCMMYDVSMMSDYMLKARTEAERKAIDEEMGFLTPILKGCITELGLEAANLGV 437

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +C GG GYI+E  + ++ R++   ++  G+     LD+L          +       +  
Sbjct: 438 QCYGGHGYIKEWGMEQNVRDARIGTLYEGTTGIQALDLLGR--------KIFIQQKGRSF 489

Query: 477 GSSGKKVITILRDSI 491
           G   K+V    +  +
Sbjct: 490 GQFAKRVFAYTKKQL 504


>gi|154706589|ref|YP_001424445.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111]
 gi|154355875|gb|ABS77337.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111]
          Length = 387

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 27/400 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP- 126
               E+ R A           P     D     P    L  +    G+     +  +   
Sbjct: 10  DETIEMLREAVQQFAS-EEIAPRAAFIDANNQFP--RDLWLKLGDLGVLGITVNEEYGGS 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +    T    K + PK+ + E+   
Sbjct: 67  QMGYLAHVIAMEEISRASGSVGLSYGAHSNLCVNQINRFGTETQKKRYLPKLINGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+  +  + ++  D         W  + P +D  I+ 
Sbjct: 124 ----------VGALAMSETEAGSDVVGMRLRAEQKGDIFILNGTKMWITNGPEADVVIVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       +LG+LN
Sbjct: 174 AKTDPGAGSRGITAFLIEKDFPGYRTAQKLHKLGMRGSDTCELVFDHCEVPKENILGELN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        L      +  M+  L   + Y   R      + +  +++  IAD+ 
Sbjct: 234 KGISVLMSGLDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMY 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +A S D  K  S++AA A +       +  + A  V  +A++C+GG+G
Sbjct: 294 TALNASRAYLYAIAQSADAGKIHSKDAASALM-------FAAENATQVALQAIQCLGGNG 346

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E  + R  R++    I  G+     + V   L +   
Sbjct: 347 YITEFPVERFLRDAKLYEIGAGTSEIRRIVVGRELFREGK 386


>gi|297624541|ref|YP_003705975.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165721|gb|ADI15432.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 142/396 (35%), Gaps = 34/396 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A+E AR             P     D+ E +P   A++ R    GL  +    S   +
Sbjct: 15  ALAREFARDV---------IAPVAAEHDREESYPE--AVVARGFELGLLNTGIPASLGGL 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 ++        A +    +   S    + + +  +                    
Sbjct: 64  GLGMVDEVLIGEELAYACMGIYCIFMASELGITPILVAGSEEQQARLLK----------- 112

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+ +        L+E   G+D  A+ ++ +   D +       W  +  +++  ++ A
Sbjct: 113 --PLLEGPKLAAFALSEPDNGSDAGAMKTRARLEGDEVVLNGTKMWISNGGLAELTVVFA 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
             +          ++ +G+P G+ YQ++  K+G R+  T EL F +        L     
Sbjct: 171 TFDPEAKHRGTLAVVVEGTPPGMSYQKIHGKLGQRACVTAELVFEDVRVPAANILGEPGD 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    +  A  SV   R +L E+  Y+  RH  G  +     ++  +AD+ +
Sbjct: 231 GFRIAMKTLDKTRIPVAAGSVGLARRALDESRRYSAERHAFGRPINSFQALQFKMADMKI 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A   +   A   D  +  +E +A       I K +   MA A   EA++  GG GY
Sbjct: 291 GIETARLQTLYAAWLVDSGQPHTEASA-------IAKAYASDMAFAAANEAIQIHGGYGY 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + E  + +  R+   N I  G+     + +   L +
Sbjct: 344 VGEYPVEKLLRDVKLNQIYEGTNEIQRVVIARGLLQ 379


>gi|196015907|ref|XP_002117809.1| hypothetical protein TRIADDRAFT_33057 [Trichoplax adhaerens]
 gi|190579694|gb|EDV19785.1| hypothetical protein TRIADDRAFT_33057 [Trichoplax adhaerens]
          Length = 416

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 134/375 (35%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+ E  P   + ++++   G                +      A          
Sbjct: 61  PNRKNWDENEIFPI--STIQKAGSLGFGGMYCREDIGGTGLSRVDSSIVAEALASGCTST 118

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++       M+      +  + W P + S                     LTE   G
Sbjct: 119 TAYITIHNMCCWMIDKFGNQKQRERWLPDLTS-------------FRKRASYCLTEPGSG 165

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ +  +   D  Y ++G K F+S   S  ++++ +  G+ G   +  ++ +    
Sbjct: 166 SDAASLITTAKSDGDH-YIINGSKMFIS-GESHCYVVMVRT-GQSGSKGISCVVIENETP 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+   + + K+G ++  T  + F +       L+G                 +  A  S+
Sbjct: 223 GINLGKNEKKLGWKTQPTHAIMFEDCRVPKKNLIGQEGQGFNIAMHGLNGGRVSIASCSL 282

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  ++ +   R   G  L     ++  +A++A D+ A+  +    A + D    
Sbjct: 283 GAAQATLEMSLEHLAVRKQFGRPLASNQYLQFRLAEMATDLVASRLMVRNAARALDAGSP 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     +  + K +  +    +  +A++  GG GY+ E  + +  R++  ++IL G
Sbjct: 343 D------LVSLCSMAKLFATEKCFKICNDAIQMHGGYGYLNEYGVHQFMRDARVHTILEG 396

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   L K
Sbjct: 397 TNEIMRMLISRDLLK 411


>gi|254181106|ref|ZP_04887704.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184211645|gb|EDU08688.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 596

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 87/434 (20%), Positives = 170/434 (39%), Gaps = 56/434 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   + E   A+  A      P+ K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAANEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGS 478
           +IEE   A++YR++   +I  G+       L        G  + + L   + Q    LG+
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGA 478

Query: 479 SGKKVITILRDSIS 492
                 T ++  + 
Sbjct: 479 HDGPAFTAMKTQLE 492


>gi|313498568|gb|ADR59934.1| AcdA [Pseudomonas putida BIRD-1]
          Length = 383

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 131/358 (36%), Gaps = 26/358 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           R+    GL   +    F            A           G +MS   +      L   
Sbjct: 44  RKMGELGLLGMVVPEDFGGSYTDYVAYALAVEEIAAGCGATGAMMSIHNSVGCGPLLAYG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             V     LTE + G++   + ++ + + DG +
Sbjct: 104 TAEQQQQWLPRLASGE-------------VIGCFCLTEPQAGSEAHNLRTRAELV-DGQW 149

Query: 227 CLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+       I+ A  +  +G   +   L      G    R ++K+G R++ 
Sbjct: 150 VINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVPTDNPGFKVDRSEHKMGIRASD 209

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F N        L     G    +  L    +  A  ++   R +   A+ Y+R R
Sbjct: 210 TCAVTFDNCRIPAANILGERGKGLAIALSNLEGGRIGIAAQALGIARAAFEAALVYSRDR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   +   +AD+ + + AA  L    A      K    E       A   K 
Sbjct: 270 IQFGKPINEHQSIANLLADMQVQVNAARLLILHAARLRSAGKPCLSE-------ASQAKL 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +MA  V + A++  GG GY+E+  + R+YR++    I  GS     + +   L+ 
Sbjct: 323 FASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRMLIARELKN 380


>gi|312884112|ref|ZP_07743824.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368160|gb|EFP95700.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 389

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 138/384 (35%), Gaps = 26/384 (6%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYL 142
                P   + D+    P  + L       GL        +    +   AH +    +  
Sbjct: 28  HEHISPLAAQIDEDNNFP--NHLWPMLGEMGLLGVTVAEQYGGADMGYLAHVVAMEEISR 85

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            +   A    + S    + +         + + PK+    +                L +
Sbjct: 86  SSASVALSYGAHSNLCVNQIYRNGNTAQKEKYLPKLVDGSH-------------IGALAM 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D+ ++  + +   +         W  + P +D  ++ A+     G   +   L
Sbjct: 133 SEPNAGSDVVSMQLRAELEGEYYRLNGSKMWITNGPDADVVVVYAKTAPDQGSKGITAFL 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            + + +G  + +  +K+G R + T EL F +       +LG++N     +        + 
Sbjct: 193 VEKTFDGFSHAQKLDKLGMRGSNTCELVFKDCMVPVENVLGEVNQGVKVLMSGLDYERVV 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   +  M+  L   I Y   R   G  + +  +++  +AD+     AA A  + +A +
Sbjct: 253 LAAGPLGIMQACLDLVIPYVHDRKQFGRSIGEFQLVQAKVADMYTRTNAARAYLYAVAKA 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  ++  ++AA           +  ++A  +  +A++ +GG+GYI E    R  R++  
Sbjct: 313 CDAGQTTRKDAAG-------VILYNAELATQMSLDAIQLLGGNGYINEYPAGRLLRDAKL 365

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463
             I  G+     + +   L + T 
Sbjct: 366 YEIGAGTSEIRRMLIGRELFEETR 389


>gi|271967132|ref|YP_003341328.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270510307|gb|ACZ88585.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 380

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 127/352 (36%), Gaps = 24/352 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +        +     ++         L  G  +S    S   VA   T    
Sbjct: 50  RAGLLGLPYPEEHGGAAQPYEVYLQVIEELAAGWLAVGLGLSVHTLSCFPVAAYGTDAQR 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
               P++   E+                  L+E   G+D AA+T++    +DG       
Sbjct: 110 AALLPEMLGGEW-------------LGAYCLSEPHSGSDAAALTTRAVPDADGYVVDGVK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W     ++D + ++A+     G   +          GL Y   + K+G RS+ T ++ F
Sbjct: 157 AWITHGGVADFYTLMARTSDDGG-RGISCFHVPAGTEGLSYGVPERKMGMRSSPTAQVRF 215

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +       LLG                 L  A  +V   + +L  A  YA+ R   G  
Sbjct: 216 DSVRLASDALLGAEGEGFRIAMAALDGGRLGIAACAVGVAQAALDAATGYAKERRQFGSR 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + D   +   +AD+A  IAAA AL    A   D  +    +AA A       K +   M 
Sbjct: 276 IADFQGVGFMLADMATQIAAARALYLDAARLRDAGRPYGTQAAMA-------KLFATDMC 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             V  +A++ +GG GY+E+  + R+ RE+    I+ G+     + +   L +
Sbjct: 329 MKVTTDAVQVLGGYGYVEDFPVERYMREAKVLQIVEGTNQVQRVVISRALAR 380


>gi|297198269|ref|ZP_06915666.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197715522|gb|EDY59556.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 390

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 128/358 (35%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +       GL    +D  +    +     ++       A+L  G  +S    ++  +A
Sbjct: 48  REVFTLLSRTGLLGLPYDSEYGGADQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALA 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +     +  P +                 +     L+E   G+D A++ ++  +  D
Sbjct: 108 TYGSKEQQVEHLPAMLGG-------------GLLGAYCLSEPSSGSDAASLRTRAARDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W     ++D + ++A+  G  G   +   L     +G+     + K+G + 
Sbjct: 155 EWVITGTKAWITHGGVADFYTVMART-GEEGPRGITAFLVPADADGVSAAAPEKKMGMKG 213

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T ++ F          +GD                L  A  ++   + +L EA+ YA 
Sbjct: 214 SPTAQVHFDAVRVPDVRRIGDEGQGFAIALSALDSGRLGIAACAIGVAQAALDEAVGYAT 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D   ++  +AD+A  I A  AL    A   D  +  +++AA A       
Sbjct: 274 GRLQFGRPIADFQGLRFMLADMATQIEAGRALYLAAARLRDAGRPFAKQAAMA------- 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K  C   A  V  +A++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 327 KLHCTDTAMKVTTDAVQVLGGYGYTADFPAERYMREAKVLQIVEGTNQIQRMVIARHL 384


>gi|297565526|ref|YP_003684498.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296849975|gb|ADH62990.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 373

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 126/361 (34%), Gaps = 28/361 (7%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           W  L R     GL        +          + A      A                 V
Sbjct: 38  WPQL-RILAELGLLGMTTPEEWGGAGLDSVTWVLAMEEIAAADPSV------------AV 84

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T  + +    K  S E       P+ K        LTE   G++ A++ +  +++ 
Sbjct: 85  ILSVTSGLPQYMLGKFGSLEQKKKYLVPLAKGEWIGAFCLTEPHAGSNPASMKTTAKRVP 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  S   +  ++++A+ E  +  FLV     +    GL + R + K+G  
Sbjct: 145 GGWQLDGVKSWITSGGQAHLYVVMARGEAGICSFLV-----EKDTPGLSFGRPEEKMGLH 199

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYA 339
           +  T E  F   F      L V    +      +    L  A  +V   R +   A  YA
Sbjct: 200 AAHTTETRFDGVFVPEENLLGVEGEGLAQALAGLDSGRLGIAAQAVGMARAAFELAKQYA 259

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +   +   +A++   IAAA AL+   A   D  +  + E       A  
Sbjct: 260 DERTQFGQRIREFQGVSFKLAEMHTKIAAARALTLEAAAKKDRGERFTLE-------ASS 312

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  + A  V  +A++ +GG GY  +  + R+YR++    I  G+     + +   L 
Sbjct: 313 AKLFASETAVDVTRQAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQKMVIARELY 372

Query: 460 K 460
           +
Sbjct: 373 R 373


>gi|301061625|ref|ZP_07202382.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300444262|gb|EFK08270.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 594

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/456 (19%), Positives = 179/456 (39%), Gaps = 57/456 (12%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGP-GGERWD--KVEFHPAWHALLRRSIHDGL 115
             L E  L     E  + A      L   G   G +++  +V   P + A  +    +G 
Sbjct: 31  RELDEDTLDMLVNEAVKFAKGRIDPLQEIGENWGVKFEDGRVLCAPEFKAAFKDYGENGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKD 173
             +I D  +        H +R     LM        M+PS+T  +A ++    +  + + 
Sbjct: 91  TAAIHDPEYGGQGFP--HMMRIVINDLMYGAAQSFNMAPSLTRGAAHLIEAFGSEELKER 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK++  ++  T             + LTE   G+++AA+ S   +  D    + G K 
Sbjct: 149 YVPKMYGGQWAGT-------------MALTESNAGSNLAALRSTAYREGDHF-KIKGSKI 194

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+S    D       ++LA++EG       +  F+VP++  +     G  N +    ++ 
Sbjct: 195 FISWGEHDLTENIIHLVLARIEGAPEGIKGISLFVVPKIRVNADGSPGEFNDVVCTGVEK 254

Query: 278 KIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T  L F       G+L G  N+    +  M     ++S +  ++    +   
Sbjct: 255 KMGLHASPTCALNFGDNDGCIGYLCGRENMGLAHMFVMMNEARINSGVSGMTLGSTAYQN 314

Query: 335 AIHYARRRHVS----GG-----ILIDQPVMKRAIADIALDIAAATALSF------RLANS 379
           A+ Y + R       G       +ID P ++R +  +   +    ++ +       L+++
Sbjct: 315 ALAYTKERVQGSDLCGRKKGYVPIIDHPDVRRMLLWMKATVDGMRSMIYAGAYWDDLSHA 374

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++   ++        M PI K +C  +   V   A++C+GG GY  E  + ++ R+S  
Sbjct: 375 LEDGDEKTHYKNLTEFMTPIIKAYCSDLGFKVCETAVQCLGGYGYCREYPLEQYLRDSKI 434

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473
            S+  G+     +D++   +       F+     +E
Sbjct: 435 VSLYEGTNGIQSMDLMGRKMRMNDGASFKAYMKEIE 470


>gi|254254420|ref|ZP_04947737.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158]
 gi|124899065|gb|EAY70908.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158]
          Length = 377

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 140/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD+    P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-DVLAPNAAQWDRDAHLPD--AVVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEVAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
            A M    V     LTE + G++   + ++ + + DG + L+G K F+++       I+ 
Sbjct: 112 -ADMAAGRVIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    + + K+G R++ T  +   N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFIVPTDTPGFIVGKPEKKMGIRASDTCPITLENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|307730602|ref|YP_003907826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307585137|gb|ADN58535.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 596

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/493 (19%), Positives = 191/493 (38%), Gaps = 70/493 (14%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER----WDK--VEFH 100
           IA  P      L+           +E A++       L      G+R    W+   V   
Sbjct: 23  IATLPGFEDASLD-----TAQAVLEESAKLC---GEVLAPLNVEGDRNPSSWNDGVVTAT 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +    R+    G         ++     +   I    + ++        + P +T  +
Sbjct: 75  PGFKEAFRQFAEGGWQGVQHPLDYDGQGLPK--LIATPCVEMLNASNLSFALCPLLTDGA 132

Query: 161 MVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           + AL+T  +    + + P++ S E+  T             + LTE + G+D+A + ++ 
Sbjct: 133 IEALLTAGSDAQKQTYVPRLISGEWTGT-------------MNLTEPQAGSDLALVRTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE------GRVGCFLVPRLLED--- 264
           +  +DG + L G K F++    D       ++LA+          +  F+VP+ L +   
Sbjct: 180 EPQADGSFKLFGTKIFITWGEHDMAANIAHLVLARTPSAPEGVKGISLFIVPKFLVNPDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
             G  N +    +++K+G +++ T  L+F +     G L+G+ N     +  M       
Sbjct: 240 SLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFA 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAAT 370
             +  V     +  +A+ YA+ R  S            +I+ P ++R ++ +     A+ 
Sbjct: 300 VGMQGVGVSDRAYQKAVAYAKERVQSRPVDGSSKQPVPIIEHPDVRRMLSTMRALTEASR 359

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL++  A   D A    +    A   A      PI K W  +++  V +  ++  GG G+
Sbjct: 360 ALAYVAAAHSDIAHRHPDAGKRAEHQAINEFLVPIVKGWSTELSIDVTSLGVQVHGGMGF 419

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLE---QDLGSS 479
           IEE   A++YR++    I  G+      D++    +  G  + + L + +    + LG+ 
Sbjct: 420 IEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVESLGAQ 479

Query: 480 GKKVITILRDSIS 492
                  +R  ++
Sbjct: 480 HGAAFESMRKHLA 492


>gi|153006023|ref|YP_001380348.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029596|gb|ABS27364.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 598

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 204/563 (36%), Gaps = 90/563 (15%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           P    M     +   +  ++  P      LE     V      E  ++A      L    
Sbjct: 6   PPLRDMQFVLREVAPLDEVSRLPGCGDVNLE-----VAEAILTEAGKLA---AGVLSPLN 57

Query: 89  PGGER------WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           P G+R        +V     W    R+ +  G +    D  +          + A    +
Sbjct: 58  PVGDREGARARDGEVVTPTGWREAYRQFVEGGWNALSCDPEYGGQGVP--RLVSALVEEM 115

Query: 143 MAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                    + P +T  ++ AL    +  + + + PK+ S E+  T             +
Sbjct: 116 WNGANMAFTLCPMLTRGAIAALELKGSEELKRRYLPKLTSGEWTGT-------------M 162

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
            LTE + G+D++A+ ++  +  DG Y L G K F++    D       ++LA+       
Sbjct: 163 VLTEPQAGSDLSAVRTRAVRQGDGSYRLEGQKIFITYGDHDLTENIVHLVLARTPDAPEG 222

Query: 252 --RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
              +  F+VP++L +     G  N +    +++K+G  ++ T  L F +     G+L+G+
Sbjct: 223 VKGISLFVVPKVLVNADGSLGPRNDVRCVSIEHKLGIHASPTAVLAFGDREGAVGWLVGE 282

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------GGILIDQ 352
            +     +            + +V     +   A+ YAR R               ++  
Sbjct: 283 EHRGLEYMFITMNEARYAVGLEAVGLAERAYQAALAYARERLQGTELGARSKEKVPILRH 342

Query: 353 PVMKRAIADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           P ++R +  +     A  A++         A    +A+ R+   A+  +  PI K W   
Sbjct: 343 PDVRRMLLLMKSRTEAMRAVACVTAAAMDAARCHPDAERRARSQAFVELTIPIVKAWSSD 402

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A  + +  ++  GG GY+EE   A+  R++   SI  G+     +D++           
Sbjct: 403 SAIEIASLGIQVHGGMGYVEETGAAQLLRDARITSIYEGTNGIQAVDLVG---------- 452

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
                + +D G + ++V+  +R+  +  +        L E   L + AA L R G+  + 
Sbjct: 453 ---RKVARDGGDAIRRVMGEMREVETQLE--------LEESEPLTAIAARL-RLGVAALE 500

Query: 527 DV--FL-ENRFLDNCHSTHCMLH 546
               F+      D   ++   + 
Sbjct: 501 QAVQFIVATYGKDARRASVGAVP 523


>gi|322368810|ref|ZP_08043377.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320551541|gb|EFW93188.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 374

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 130/391 (33%), Gaps = 28/391 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q   R             P     D+ +  P    +        +        +  +   
Sbjct: 7   QRAIRDVVREFAV-EEIRPVAAECDEKQEFPE--DVWDGLADLDMMGMTVPEEYGGLDVD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +              L     +S    + S +A        + W P              
Sbjct: 64  KLTYSVVNEEVAYGTLSVATALSVHCLATSCLAEFGNEEQKERWLPD------------- 110

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M K        L+E   G++ A ++++ ++  D        +W  +   +D  ++ A+ +
Sbjct: 111 MAKGRPVGAFALSEPEAGSNPAEMSTEARREGDEYVINGKKQWITNGKRADVIVLFAKTD 170

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307
            R     V + +      G+   + + K+G R++ T  L F +      + L +      
Sbjct: 171 -RDDPRSVTQFVVPKDA-GVEVGKKEEKLGLRASDTTSLIFDDVRIPAEYRLTEEGKGLS 228

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               +     +  A  +V   + +L +A+ YA+ R      + D   ++  +AD+   + 
Sbjct: 229 AAFHILTGGRIGIASQAVGLSQAALDQAVEYAQDREQFDRPIADIQTIRHKLADMQTKLQ 288

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L+   A   D  +  +  A+ A       KY+  + A  +  EA++  GG GY  +
Sbjct: 289 AGRLLTRDAARRADNGEDHAAAASMA-------KYFASESAVEITNEAVQIHGGYGYTTD 341

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R YR+S   +I  G+       +   L
Sbjct: 342 FDVERFYRDSKITTIYEGTSEIQKKVIARDL 372


>gi|15610410|ref|NP_217791.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis H37Rv]
 gi|15842864|ref|NP_337901.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31794454|ref|NP_856947.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium bovis AF2122/97]
 gi|121639163|ref|YP_979387.1| putative acyl-CoA dehydrogenase fadE25 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663137|ref|YP_001284660.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis H37Ra]
 gi|148824476|ref|YP_001289230.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis F11]
 gi|167968905|ref|ZP_02551182.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis H37Ra]
 gi|215405287|ref|ZP_03417468.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|215413152|ref|ZP_03421853.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428758|ref|ZP_03426677.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|215432239|ref|ZP_03430158.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|215447579|ref|ZP_03434331.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T85]
 gi|219559334|ref|ZP_03538410.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|224991656|ref|YP_002646345.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800317|ref|YP_003033318.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 1435]
 gi|254233884|ref|ZP_04927209.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis C]
 gi|254365897|ref|ZP_04981942.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552376|ref|ZP_05142823.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188323|ref|ZP_05765797.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|260202436|ref|ZP_05769927.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T46]
 gi|260206626|ref|ZP_05774117.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis K85]
 gi|289444856|ref|ZP_06434600.1| acyl-CoA dehydrogenase fade25 [Mycobacterium tuberculosis T46]
 gi|289448963|ref|ZP_06438707.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|289555552|ref|ZP_06444762.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 605]
 gi|289571501|ref|ZP_06451728.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|289575994|ref|ZP_06456221.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis K85]
 gi|289747092|ref|ZP_06506470.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|289751969|ref|ZP_06511347.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|289755397|ref|ZP_06514775.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|289759415|ref|ZP_06518793.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis T85]
 gi|294993785|ref|ZP_06799476.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis 210]
 gi|297635928|ref|ZP_06953708.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN 4207]
 gi|297732925|ref|ZP_06962043.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN R506]
 gi|298526750|ref|ZP_07014159.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777603|ref|ZP_07415940.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu001]
 gi|306782325|ref|ZP_07420662.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu002]
 gi|306786147|ref|ZP_07424469.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu003]
 gi|306790515|ref|ZP_07428837.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu004]
 gi|306795036|ref|ZP_07433338.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu005]
 gi|306799234|ref|ZP_07437536.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu006]
 gi|306805082|ref|ZP_07441750.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu008]
 gi|306809269|ref|ZP_07445937.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu007]
 gi|306969371|ref|ZP_07482032.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu009]
 gi|306973723|ref|ZP_07486384.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu010]
 gi|307081432|ref|ZP_07490602.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu011]
 gi|307086036|ref|ZP_07495149.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu012]
 gi|313660257|ref|ZP_07817137.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54036658|sp|P63428|ACDP_MYCBO RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|54040670|sp|P63427|ACDP_MYCTU RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|1877329|emb|CAB07077.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE25 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883195|gb|AAK47715.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31620050|emb|CAD95394.1| PROBABLE ACYL-COA DEHYDROGENASE FADE25 [Mycobacterium bovis
           AF2122/97]
 gi|121494811|emb|CAL73292.1| Probable acyl-CoA dehydrogenase fadE25 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599413|gb|EAY58517.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis C]
 gi|134151410|gb|EBA43455.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507289|gb|ABQ75098.1| acyl-CoA dehydrogenase FadE25 [Mycobacterium tuberculosis H37Ra]
 gi|148723003|gb|ABR07628.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis F11]
 gi|224774771|dbj|BAH27577.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321820|gb|ACT26423.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 1435]
 gi|289417775|gb|EFD15015.1| acyl-CoA dehydrogenase fade25 [Mycobacterium tuberculosis T46]
 gi|289421921|gb|EFD19122.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CPHL_A]
 gi|289440184|gb|EFD22677.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 605]
 gi|289540425|gb|EFD45003.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis K85]
 gi|289545255|gb|EFD48903.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T17]
 gi|289687620|gb|EFD55108.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis 02_1987]
 gi|289692556|gb|EFD59985.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis T92]
 gi|289695984|gb|EFD63413.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis EAS054]
 gi|289714979|gb|EFD78991.1| acyl-CoA dehydrogenase FADE25 [Mycobacterium tuberculosis T85]
 gi|298496544|gb|EFI31838.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214144|gb|EFO73543.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu001]
 gi|308325075|gb|EFP13926.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu002]
 gi|308329296|gb|EFP18147.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu003]
 gi|308333127|gb|EFP21978.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu004]
 gi|308336814|gb|EFP25665.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu005]
 gi|308340648|gb|EFP29499.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu006]
 gi|308344381|gb|EFP33232.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu007]
 gi|308348385|gb|EFP37236.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu008]
 gi|308353222|gb|EFP42073.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu009]
 gi|308356962|gb|EFP45813.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu010]
 gi|308360963|gb|EFP49814.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu011]
 gi|308364503|gb|EFP53354.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis SUMu012]
 gi|323718143|gb|EGB27325.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis CDC1551A]
 gi|326902498|gb|EGE49431.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis W-148]
 gi|328460051|gb|AEB05474.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis KZN 4207]
          Length = 389

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 122/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAAEVDEKARFPE--EALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P +                       L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSEELKKQVLPAL-------------AAEGAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F N     +    +   P    K  L  LD    ++  
Sbjct: 201 GFTVGPKERKLGIKGSPTTELYFENCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GEPD------LGFISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|254509713|ref|ZP_05121780.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533424|gb|EEE36412.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 387

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 140/400 (35%), Gaps = 31/400 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D     P  + L +     GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQERVKPMAAEIDASNAFP--NELWKEMGELGLLGVTVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  T    + + P++ S ++  
Sbjct: 67  AGMSYLAHTIAVEEVARASASVSLSYGAHSNLCVNQIKLNGTEEQKQRYLPRLISGDH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEPSAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L +    G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPDAGSKGITAFLIEKEMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GRGVAVLMSGLDYERVVLAGIGTGIMAACLDEVMPYLAERKQFGKPIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQALGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           G++ +  ++R +R++    I  G+     + +   +    
Sbjct: 347 GFLSDAPVSRIFRDAKLMEIGAGTSEIRRMLIGREMMNEM 386


>gi|70729290|ref|YP_259027.1| hypothetical protein PFL_1908 [Pseudomonas fluorescens Pf-5]
 gi|68343589|gb|AAY91195.1| fadE13 [Pseudomonas fluorescens Pf-5]
          Length = 382

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 28/364 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    L  ++   GL    +  +             AA   LM     G +
Sbjct: 32  DEWEEAGSFP--RELYLKAGAAGLLGIGYPEALGGSHEGDLFAKIAASEELMRSGSGGLV 89

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                    +  +     P + +  AP + S E                 L +TE  GG+
Sbjct: 90  AGLGSLDIGLPPIVKWARPELRERVAPLVLSGE-------------KISALAVTEPGGGS 136

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A + ++  +  D  Y LSG K F++S +   F  +A   G  G   +  LL +    G
Sbjct: 137 DVANLQTRAVRDGDH-YRLSGSKTFITSGVRADFYTVAVRTGEPGYGGISLLLVEKGTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R   K+G  ++ T EL F +     G L+G  N+    +        L  A+M+  
Sbjct: 196 FTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANM 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +++L E++ +AR R   G  +    V+K  +A++A  +  +   ++R A      KS 
Sbjct: 256 TSQMALEESLKWAREREAFGKPIAKFQVLKHRLAEMATALEVSREFTYRQAAKMAAGKSV 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E         + K +    A  +  +A++ +GG GY+ E  + R YR++   SI  G+
Sbjct: 316 IKE-------ISMAKNFATDTADRITHDAVQILGGMGYMRESLVERLYRDNRILSIGGGT 368

Query: 447 GNAM 450
              M
Sbjct: 369 REVM 372


>gi|115522699|ref|YP_779610.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516646|gb|ABJ04630.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 596

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/527 (19%), Positives = 186/527 (35%), Gaps = 59/527 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRS 110
                     V      E A+++      L+      G        V     +    ++ 
Sbjct: 27  LPGFSDASADVREAILSEAAKLSEQVLAPLNRIGDKQGCTRHPDGSVTTPDGFKEAYKQV 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G         +             +     A          ++ +++ + +   P  
Sbjct: 87  SEGGWLGLSAPEEYGGQGLPSTLSHAVSEFQNSANHAFAMYHGLTMGASAALLVHGKPEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ S E+  T             + LTE + GTD+  + ++  K +DG Y ++G
Sbjct: 147 KAMFLPKMVSGEWTGT-------------MNLTEPQCGTDLGLLRAKAVKQADGSYKITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F+S+   D       ++LA++EG       V  F+VP++L +     G  NG+    
Sbjct: 194 TKIFISAGDHDLTENIIHLVLARIEGAPAGIKGVSLFVVPKVLVNEDGSLGERNGVTCGA 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           L++K+G   NAT  L + N  G+L+G+ N     +  M     L  A+  ++   V+   
Sbjct: 254 LEHKMGIHGNATCVLNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQN 313

Query: 335 AIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
           A+ YA+ R                  +I  P ++R +  I     AA A     A     
Sbjct: 314 AVIYAQERLQGRSLTGAKATDKPADPIIVHPDIRRTLLTIRAFNEAARAFVIWTALKGDI 373

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +  D+AK R     +  +M PI K     +  A    A +  GG GYI +  + +  R+
Sbjct: 374 SHRSDDAKERQAADDHMGLMTPILKGVLTDIGFANAVSAQQVWGGHGYIADNGMEQFVRD 433

Query: 437 SPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-----KKVITILRD 489
           +    I  G+     LD++   L   G       F+ +   L   G     K  +  L +
Sbjct: 434 ARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVNAFLKEHGTDDKMKPYVAPLSE 493

Query: 490 SIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
           S+  L K    L      +   A + A  Y      +A  ++  R  
Sbjct: 494 SLGHLQKATTWLMMNAMAQPDNAGAGATDYMHLFGLVALGYMWARMA 540


>gi|242010283|ref|XP_002425898.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212509874|gb|EEB13160.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 338

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 10/268 (3%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +     LTE   G+D  A+ +  ++  D         W  +S ++  FI+ A  +   G 
Sbjct: 75  LVGSFCLTEPYSGSDAFAMKTSAKQEGDYFILNGSKMWISNSDIAKFFIVFANADSSKGY 134

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             +   L +    GL   + +NK+G R++ T ++ F N       +LG+L          
Sbjct: 135 RGITTFLVERDAPGLSVGKKENKLGIRASGTCQVNFDNVKIHKSAVLGELYQGYKYAAGF 194

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +  A   +   +      I Y   R   G  + D   M+  IADIA+ +  +  L
Sbjct: 195 LNESRIGVAAQMLGLAQGCFDVTIPYTLERKQFGHKIFDFQAMQHQIADIAVKLECSRLL 254

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  +   +   S ++EA+ A       K++  +MA  V    ++ IGG G+ ++    +
Sbjct: 255 VYNASRRVEAGISFAKEASMA-------KFYVTEMAHEVTKRCIDWIGGVGFTKDFPQEK 307

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            YR+    +I  G+ N  +  +   L+K
Sbjct: 308 FYRDCKIGTIYEGTSNIQLNTIAKFLKK 335


>gi|75061870|sp|Q5RAS0|ACADS_PONAB RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|55728802|emb|CAH91140.1| hypothetical protein [Pongo abelii]
          Length = 412

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|254703131|ref|ZP_05164959.1| hypothetical protein Bsuib36_04187 [Brucella suis bv. 3 str. 686]
 gi|261753750|ref|ZP_05997459.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261743503|gb|EEY31429.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 597

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/569 (18%), Positives = 193/569 (33%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D      + NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKFILDENGNPDTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|229091330|ref|ZP_04222545.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
 gi|228691959|gb|EEL45701.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42]
          Length = 569

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|146343493|ref|YP_001208541.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196299|emb|CAL80326.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 596

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/491 (19%), Positives = 177/491 (36%), Gaps = 64/491 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALL 107
                     V      E A++A      LH     G+     R D   V     +    
Sbjct: 27  LPGFSDASADVREAILGEAAKLAEE---VLHPLNRVGDLEGCKRHDDGSVTTPKGFKEAY 83

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           ++    G         +                   A +        ++ + + + +  +
Sbjct: 84  KQIKEGGWLGLSAPTEYGGQGLPVTLSQTVNEFQCSANMAFSMYGGLTMGATAALIVHGS 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ + E+  T             + LTE   GTD+  + ++  + +DG + 
Sbjct: 144 EEQKKTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFK 190

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           +SG K F+S+   D       ++LA++EG       +  F+VP+ + +     G+ NG+ 
Sbjct: 191 ISGTKIFISAGEHDLADNIIHLVLARIEGAPAGIKGISLFVVPKFMVNADGTLGARNGVM 250

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   N+T  + + N  G+L+G+ N     +  M     L  A+  ++   V+
Sbjct: 251 CGSIEHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVA 310

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF----- 374
              A  YAR R                  +I  P ++R +  I     AA A+       
Sbjct: 311 YQNAAAYARERIQGRSLTGAKATDKPADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLK 370

Query: 375 -RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             +A+   + K R     +  +M P+ K +   M  A   +A +  GG GYI E  + + 
Sbjct: 371 SDVAHRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVQAQQMYGGHGYIAEWGMEQF 430

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL-----EQDLGSSGKKVITI 486
            R++    I  G+     LD++   L   G       F  +     E     + K  IT 
Sbjct: 431 VRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFGEVGSFAKEHGGSDAMKPFITP 490

Query: 487 LRDSISLCKED 497
           L  ++   ++ 
Sbjct: 491 LSMALGHLQQA 501


>gi|294651674|ref|ZP_06728977.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822453|gb|EFF81353.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 607

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 172/459 (37%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVTTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +++  M  +    T      + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G +++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLTQKAV 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                A+ +  A   D   +A    ++AAY           PI K +  ++        M
Sbjct: 357 AEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI E  + +  R++  +++  G+     LD++    LL     +     + + 
Sbjct: 417 QVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCATHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|312111551|ref|YP_003989867.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216652|gb|ADP75256.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 381

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 143/377 (37%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +   +   +G  C   D  +       A+ +             
Sbjct: 27  PYYSEWEKKGIIP--RSFWTKMGENGFLCPWVDEKYGGFNADFAYSVVINEELEKVGSSM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +  +   +A   T    + W PK  S E             +   + +TE   G
Sbjct: 85  VGIGLHNDIAVPYLASYGTEDQKRKWLPKCVSGE-------------IITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I++   K  D  Y ++G K F+++ +    +++A + +   +     +  L+ + 
Sbjct: 132 SDLAGISTTAIKDGDH-YIVNGQKTFITNGIHADLVIVACKTDPNAKPPHKGISLLVVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 191 DTPGFTRGRKLDKVGLHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V       Y ++R   G  + +   ++  +A+++ +I         +     +
Sbjct: 251 AAQTAAEVMFELTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQ 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+             + K+W  +MA  + AE+M+  GG GY+EE  IAR YR+ P ++I
Sbjct: 311 GKN-------VVTHVSMAKWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+   M   +   L+
Sbjct: 364 YAGTNEMMKTIIARNLD 380


>gi|83943210|ref|ZP_00955670.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83846218|gb|EAP84095.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 380

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 139/380 (36%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W+K E  P    L  +    G                +           MA
Sbjct: 22  EHIAPFAQKWEKDETIP--KDLWPKIAELGFGGLYVSEDAGGSGLTRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P I S              +  +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAKMLDSFASDELKSRIMPDILSM-------------NTVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +     G   V  +  
Sbjct: 127 PGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDD-GAAGVSTVYV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +  L++K+G RS  T +++F +     G L+G+                L+ 
Sbjct: 185 EDGTAGLSFGGLEDKMGWRSQPTSQVQFDDCNIPAGNLVGEEGKGFKYAMMGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L   + Y   R   G  +     ++  +A++ +++ AA     + A   
Sbjct: 245 AACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAARVFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K +  +    V+ + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DTGAPD------ATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M + V   + K
Sbjct: 359 QILEGTNEIMRVIVARDMLK 378


>gi|289581966|ref|YP_003480432.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289531519|gb|ADD05870.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 381

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 144/397 (36%), Gaps = 29/397 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q++  M +    +     P  +  D  +  P    L+      GL    +  
Sbjct: 2   DFALSAEQQQIREMVSEFVDE--EIVPVADEIDHEDEFP--QDLVDEMADLGLMGMPFPE 57

Query: 123 SFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        ++ I    +   +      + + +  + +M+         +++       
Sbjct: 58  EYGGAGLDYHSYAIGLEEISRGSGGLGTVVAAHTSLAGNMLYEFGDDAQLEEYL------ 111

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                   P+          L+E   G+D+ A+ +  +K  D      G  W  +  +SD
Sbjct: 112 -------TPLAAGEDIGAFALSEAGAGSDVPAMETTAEKDGDEYVLNGGKLWISNGSVSD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              + A+ +   G   +   +      +G   +  + K+G++   T EL F +       
Sbjct: 165 TVTVFAKTDADAGNKGISSFVVRPEEDDGFIVENTEEKLGDKGCPTAELRFDDLRIPENR 224

Query: 301 DLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G V+ +K      +  A  S+   R +  EA  YA  R   G  + +   +K 
Sbjct: 225 LLGAEGDGFVQALKTLNGGRITIAARSIGIARAAFDEARDYAGEREQFGQPIGEFQSIKH 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   I AA  L  + A+     ++  ++AA A       K +  +++  V  E ++
Sbjct: 285 KLADMDTKIQAARMLMHKAADKKIRGENYIKDAAQA-------KLYASEISREVANEGIQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             GG GY ++    R YR++  N I  G+   +   +
Sbjct: 338 IHGGYGYTKDFPAERFYRDAKLNEIYEGTSEVLRNTI 374


>gi|221065050|ref|ZP_03541155.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710073|gb|EED65441.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 598

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 86/454 (18%), Positives = 162/454 (35%), Gaps = 64/454 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + I  G      D  +          + +A   ++        M P 
Sbjct: 74  EVTTPKGFKQAYAQFIEGGWPALSCDPEYGGQGLP--FVLNSALYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    TP   K +  K+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAYGTPEQKKIYLGKLTSGEWTGT-------------MCLTEPHCGTDLGM 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y ++G+K F+S+   D       ++LA++         +  F+VP+  
Sbjct: 179 LRTKAEPQADGSYKITGNKIFISAGEHDFTSNIVHLVLARLPDAPPGSKGISLFVVPKFK 238

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
            +     G  N +    L++K+G   NAT ++      G L+G+ N     +  M     
Sbjct: 239 VNADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGLQAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P ++R +      
Sbjct: 299 LGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVRRMLLTAKAY 358

Query: 366 IAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                ALS       D      + K R +      ++ PI K +           + +  
Sbjct: 359 AEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWTATTLSQQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG G+I+E  + +  R++  N I  G+     LD+L     G               G++
Sbjct: 419 GGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQ-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            KK   ++   +     ++ ++ F+T    L   
Sbjct: 466 LKKFGKLIAQLVEEEGVNEKMSEFITPIAVLGEQ 499


>gi|332535044|ref|ZP_08410858.1| branched-chain acyl-CoA dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035513|gb|EGI72008.1| branched-chain acyl-CoA dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 385

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 139/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q  A+ A           P   +WD+    P     ++ +   G        
Sbjct: 2   DFNLSEDQQAFAQTARQFAE--SELAPHAAKWDREHIFP--KDTIKAAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +           M       +++    +  MVA   T  V   +  ++   E
Sbjct: 58  EAGGLGLSRLDSSIIFEQLAMGCTATTAMLTIHNMATWMVASFGTDAVKDKYVEQLVMGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                        +     LTE   G+D A++ ++     D  Y ++G K F+S    ++
Sbjct: 118 -------------LLASYCLTEPGSGSDAASLKTKAVLEGDE-YVINGSKMFISGAGETE 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+  G  G   +   +      G+ Y + + K+G  +  T  + F +       L
Sbjct: 164 VLVVMARTGGE-GAAGISAFVVPADAKGVEYGKAEEKMGWNAQPTRLISFEDVRIPAHNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++ A  S+   + +L  A  Y + R   G  L     ++  
Sbjct: 223 LGAEGEGFKFAMQGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+  ++ AA  +    A   D                 + K +   +   V  +A++ 
Sbjct: 283 IADMNTELVAARQMVRLAAFKLDNNDVEK------TTYCAMAKRFATDVGFTVCNDALQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + RH R+   + IL G+   M + +   +
Sbjct: 337 HGGYGYIKEYPLERHVRDVRVHQILEGTNEIMRVIIARRI 376


>gi|163750402|ref|ZP_02157642.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161329892|gb|EDQ00878.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 389

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 134/361 (37%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +        AH +    +   +        + S    + + 
Sbjct: 47  DLWPVLGDMGLLGVTVSEEYGGADMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ S E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNAEQKAKYLPKLISGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + D    G    +  +K+G R 
Sbjct: 154 RYIFNGNKMWITNGPDAQTYVVYAKTDLHKGAHGITAFIVDRDSKGFSTAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F +         N+  G  + +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFQDCEVPA---ENILGGLNKGIKVLMRGLDYERVVLSGGPLGIMNACMDIVIP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  + +  +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSYVYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|256825977|ref|YP_003149937.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256689370|gb|ACV07172.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 391

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 136/386 (35%), Gaps = 40/386 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R++K    PA   +       GL    +D  F    +     ++       A +  
Sbjct: 29  PKADRYEKNAEFPA--EVFHTLGEAGLLGLPFDEEFGGANQPYEVYLQCIEELSSAWMAI 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S  V +   +    T    +   P +   E+                  L+E   G
Sbjct: 87  GVGVSIHVLTCFPINSYGTQEQKERLLPSMIGGEWFG-------------SYCLSEPAAG 133

Query: 209 TDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +D+A++ ++     D              G  W   +  +D +   A+  G      +  
Sbjct: 134 SDVASMRTKAVGSGDVDETGRSEEYAISGGKMWISHAGHADFYTTFART-GENDGKGISC 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319
               G   GL +   + K+G  S+   E+ +           N+   P + + I L  LD
Sbjct: 193 FHVPGDAPGLTFAEPERKMGLHSDTVREVLYDKVTVP---GENLIGTPGKGLGIALAALD 249

Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           S  + ++     LA+A     + YA  R   G  + +   ++  +AD+    +AA A   
Sbjct: 250 SGRLGIAAASTGLAQAATDLALKYAAERQQFGKPIAENQGLQFMLADMQAQTSAARATYL 309

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  K  S EAA       I K +    A  V  +A++ +GG GY  +    R++
Sbjct: 310 HAARLKDAGKKFSREAA-------IAKLFASDTAMKVTTDAIQVLGGYGYTTDFPAERYF 362

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+     + +   + K
Sbjct: 363 RDAKITQIFEGTNQIQRMVIARDMLK 388


>gi|226943757|ref|YP_002798830.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718684|gb|ACO77855.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 614

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 117/573 (20%), Positives = 207/573 (36%), Gaps = 75/573 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VE 98
           +L  L+          L  +   ++S    E  R+ +     L+A     G R  +  VE
Sbjct: 37  VLNELVELEGFCSGAGLNEVNGELVSAILAEAGRLGSEVLAPLNAIGDTRGARLSERGVE 96

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P + A  R+    G        ++               ++  A L        +  +
Sbjct: 97  ETPGFAAAYRQFQESGWPSLTAAEAWGGQNLPNVVGTAVNEIWHSANLAFALCPMLTQGA 156

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   +  +   + PK+ S E+  T             + LTE   G+D+AAI ++ 
Sbjct: 157 LEAIAHHASAELQAAYLPKLVSGEWTGT-------------MNLTEPDAGSDLAAIKTRA 203

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED--- 264
               D  Y +SG K F++            ++LA++         +  F+VP+ L D   
Sbjct: 204 VPNGDH-YLISGQKIFITWGDHQMTDNVIHLVLARLPDAPAGVKGISLFIVPKFLLDAQG 262

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             G+ N      L++K+G  ++ T  + F       G+L+G+ +     +  M       
Sbjct: 263 NPGARNDAQCVSLEHKLGIHASPTCVMSFGEKEGAVGYLVGEPHKGLACMFTMMNHARQS 322

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALS 373
             +  +S    +  +A  YAR R            +I+ P ++R +  +   I A  AL+
Sbjct: 323 VGLQGLSISERAYQQARQYARERLQGTRKDGSRFPIIEFPDVRRMLLQMKASIEAMRALA 382

Query: 374 FRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A   D      + AA AR       + PI K W  ++A  V +  ++  GG G+IEE
Sbjct: 383 LVAAAEVDRVTHAPDPAAAARHQGRVDLLTPIVKGWLTELAQEVTSLGVQIHGGMGFIEE 442

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKV-- 483
              ARHYR++   +I  G+     LD++    L     L   LF  + + +         
Sbjct: 443 TGAARHYRDARILTIYEGTTGIQALDLVGRKTLLNRGELLAGLFDEIGETVARLESAAPF 502

Query: 484 ---ITILRDSISLCKEDKGLARFLTE----KIALASSAAA------------LYRAGMND 524
                 L ++++  +E +   R L E      ALA S +                AG   
Sbjct: 503 AVQARALGEALAAGREAR---RLLLEGAEGDAALAGSVSVNFLMLCGYLCGGWLMAGSAL 559

Query: 525 IADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
            A   LE    D       ++  RF +  ++  
Sbjct: 560 RAQALLEAG-GDRAFLEAKLVSARFYSEQLLPR 591


>gi|221069550|ref|ZP_03545655.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714573|gb|EED69941.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 386

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 136/365 (37%), Gaps = 26/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++     GL        F  +      ++R    L   A      + +     +  + +
Sbjct: 40  IVQEMRDLGLFGLTIPERFGGLELTMEEEVRVLLELCQTAPAFRSVIGTTVGIGSQGILM 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W P++ + E             V     LTE   G+D A++ +   K  D 
Sbjct: 100 DGTPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++P +  F ++A+      G   V   + D    G+ + +   K+G R 
Sbjct: 147 YIVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIVDARSAGISFGKYDRKMGQRG 206

Query: 284 NATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N    +     L    G    MK+L    +  A ++V   +  L +A+ YA
Sbjct: 207 AHTCDVIFDNVKVPVANLIGLQEGKGFKTAMKVLEKGRIHIAAVAVGCAKRILRDALQYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S E       A  
Sbjct: 267 LERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGGNVSTE-------ASC 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +M   V   A++ +GGSGY+ E  I R YR+     +  G+     + +   + 
Sbjct: 320 AKMFATEMCGRVADRAVQILGGSGYMSEYGIERFYRDVRLFRLYEGTTQIQQIIIARNMV 379

Query: 460 KGTNL 464
           +    
Sbjct: 380 REARA 384


>gi|18312597|ref|NP_559264.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160066|gb|AAL63446.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 410

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 135/393 (34%), Gaps = 28/393 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ +  P    +L++   +G         +             +  +       
Sbjct: 36  PRAMEIEETDEVP--RDILKKIAENGFFGIGIPEKYGGQGGDHRMAAILSEEFCRVLPGL 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +    + + L  T    + + P             P+ +        +TE   G
Sbjct: 94  SVYFGTNELFLTPIMLFGTEEQRQKYVP-------------PIARGEKFGAFAVTEPCCG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           +D+A I ++ +K  D         +  SS ++D FI+LA+     + +V    +   + +
Sbjct: 141 SDVAGIQTKAEKKGDKWVINGRKAFISSSDVADFFIVLARTYPPPDKKVRYLGLTFFIVE 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               G   ++  +K+G   N   EL   N        +     G +  M+      +  A
Sbjct: 201 KDTPGFKVEQCYHKMGLYGNHACELVLENVEVPDENRVGEEGMGFLYAMETFDRTRIGVA 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +  +A  Y  +R   G  +     ++ ++ ++   I  A  L++  A   D
Sbjct: 261 AQAVGMAQAAFEKAFQYVHQRQAFGVPIAYFQAIQFSLVEMMAKIFTARLLTYLAAKLAD 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +           +A + K++  ++A  VI+EA+   GG G I E  + R  R      
Sbjct: 321 EDRRE------FTFVASLAKFYATEVAEEVISEAINLHGGVGVIRETGVERFLRSVKITQ 374

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           I  G+ N   L     L +      Q+   + +
Sbjct: 375 IYEGANNIQKLVAYRQLIRLLKEKGQIPDEIAR 407


>gi|227820752|ref|YP_002824722.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234]
 gi|227339751|gb|ACP23969.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234]
          Length = 598

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 100/540 (18%), Positives = 185/540 (34%), Gaps = 86/540 (15%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            +++    E AR+A     P   +    G        V     +          G     
Sbjct: 36  DMVAAILGEAARLAEEELFPINLSGDQEGCKRNDDGSVTTPAGFKQAFDLYREGGWLGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F                   A +        +  + + + +  +    + + PK+ 
Sbjct: 96  APEEFGGQGLPYTLHTAVGEFLSAANMSLMMYPGLTQGAIAAILVHGSEEQKRAYLPKMV 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
              +  T             + LTE   GTD+  + ++     DG Y +SG K F+S+  
Sbjct: 156 DGTWTGT-------------MNLTEPHCGTDLGLLRTKAIPNGDGSYRISGQKIFISAGE 202

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRS 283
            D       ++LA++EG       +  F+VP+       E G+ NG+    +++K+G   
Sbjct: 203 HDMAENIIHLVLARIEGAPEGVKGISLFIVPKFKLNDDGEPGARNGVSCGAIEHKMGIHG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342
           N+T  + +    G+L+G  N     +  M     L   +  ++   ++   A +YAR R 
Sbjct: 263 NSTCVMNYDEATGYLIGAENKGLNAMFVMMNEARLAVGMQGLAIAEIAYQNAANYARERL 322

Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++R++  I     A  A +   A   D A     EA 
Sbjct: 323 QGRSLSGVKAPEQKADPIIVHPDVRRSLMTIKAFNEAGRAFTLWTALKSDIAHRSDNEAE 382

Query: 392 Y------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +M PI K             A +  GG GYIEE  ++++ R++    I  G
Sbjct: 383 RQAADDILGLMTPILKGVLTDKGFDHTVVAQQLFGGHGYIEEHGMSQYVRDARIAMIYEG 442

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD++                  +   + G+ V+ + ++    C+E++G  R   
Sbjct: 443 ANGIQALDLVG----------------RKLAINGGRAVMALFKEIGDFCEENRGDERLSA 486

Query: 506 EKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAHIIDSLYL 560
              AL        + G+ND+      F++N     DN         G  +  H+   + L
Sbjct: 487 YTKAL--------KKGLNDLQAATMWFMQNAMAKPDNAG------AGSTDYMHLFGLVVL 532


>gi|254437348|ref|ZP_05050842.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252794|gb|EDY77108.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 379

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 141/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+K E  P    L  +    G                +           M+
Sbjct: 22  EHIKPNAQAWEKAENIP--KDLWPKLAELGFGGLYVREESGGSGLSRLDATLVFEALSMS 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A+M+    +  +   + P+  S E               +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAAMIDKFGSDALRAQFLPRALSMEM-------------VLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++ ++ ++G Y L+G K F+S    S A+I++ +  G  G   +  ++ 
Sbjct: 127 PGSGSDAAALKTRAERTNEG-YALTGTKAFISGGGYSGAYIVMCRT-GDDGPKGISTVIV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +   +GL +  L++K+G R+  T +++  +       L+G+                L+ 
Sbjct: 185 EDKTDGLSFGGLEDKMGWRAQPTRQVQLDDCHIPATNLVGEEGKGFTYAMAGLNGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L + + Y   R   G  +     ++  +AD+ +++ AA     + A   
Sbjct: 245 AACSLGAAQAALTQTVAYMAERKAFGKSIDQFQALQFRLADMEIELQAARVFLHQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K +  +    V  + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DTGTPD------AAAHCAMAKKFVTEAGSRVANDCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   +
Sbjct: 359 EILEGTNEIMRMIVSRGM 376


>gi|330954908|gb|EGH55168.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 601

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP   + +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++    F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEVAQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|226953831|ref|ZP_03824295.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835422|gb|EEH67805.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 607

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 172/459 (37%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVTTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +++  M  +    T      + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G +++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLTQKAV 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                A+ +  A   D   +A    ++AAY           PI K +  ++        M
Sbjct: 357 AEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAANHGM 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG GYI E  + +  R++  +++  G+     LD++    LL     +     + + 
Sbjct: 417 QVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCATHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|301062233|ref|ZP_07202910.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300443665|gb|EFK07753.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 383

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 137/378 (36%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ E     +  +R+    GL        +        ++ I    +  +    
Sbjct: 26  PVARELDEKETFS--YDTMRKMAALGLFGMFVSEKYGGQGMDYISYAIATEEIARVDGSH 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +      +    +    + + PK+ S E                G GLTE   
Sbjct: 84  AATVAAGNSLGIGPLYYFGSEEQKQKYLPKLCSGE-------------ALWGFGLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIMLAQV-EGRVGCFLVPRLLE 263
           G+D +   +      D  + ++G K F+++    ++     L +      G   +  +L 
Sbjct: 131 GSDASNSKTTAVLDGD-QWVINGSKIFITNASTKLTSGVTSLCRTGTREDGRPELSCILV 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
           +    G   + +  K+  R++ T EL F +        L     G  + M+ L    L  
Sbjct: 190 EAGTPGFEAREMHGKLMWRASNTSELYFDDCRVPDENMLGPRGNGFHQMMQTLDGGRLSI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M + G +     A+ Y+R R   G  + +  V    +AD+AL+I  A  + ++     
Sbjct: 250 GAMGLGGAQGCYDLALKYSRERTQFGKPISNFQVNAFKLADMALEIECARLILYKACWLR 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K   +EAA A++      Y C          A++  GG G ++E  + R YR+    
Sbjct: 310 DQQKPFGKEAAMAKLHCSEVMYRC-------ANHAVQLHGGYGLMKEYDVERFYRDQKLL 362

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +  L+
Sbjct: 363 EIGEGTSEVQRIVISRLI 380


>gi|239832204|ref|ZP_04680533.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824471|gb|EEQ96039.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 385

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 136/373 (36%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ +  P    +L+ +   G+              K+   +        A    
Sbjct: 32  PHALQWDRDKHFPV--DILQETGPLGMGGIYVREDVGGSALKRLDAVLIFEALATACPSF 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+         + + PK+ S E                   LTE   G
Sbjct: 90  SAFVSIHNMAAWMIDTFGNEEQRQRFLPKLTSME-------------SLASYCLTEPGSG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  +  D  Y L+G K F+S   +    +     G  G   +  ++      
Sbjct: 137 SDAAALRTRATRDGDH-YILNGSKQFISGAGATDIYVTMVRTGEDGPKGISTIVVPKDAP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   + K+G  +  T  + F N       LLG+                L+ A  S+
Sbjct: 196 GLSFGANEFKMGWNAQPTRTVIFDNCRVPVENLLGEEGTGFRIAMAGLDGGRLNIAACSL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L +++ +  +R   G  +     ++  +AD+  +++A+  L +  A+  D    
Sbjct: 256 GGAQSALDKSLEHCSQRKAFGQTIDRFQALQFRLADMETELSASRLLLYAAASKLDRKTH 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A   + + K +       V  EA++  GG GY+ E  I +  R+   + IL G
Sbjct: 316 D------AGKWSAMAKRFVTDTGFDVANEALQLFGGYGYLHEYGIEKLVRDLRVHQILEG 369

Query: 446 SGNAMVLDVLNLL 458
           +   M + +   +
Sbjct: 370 TNEIMRVIIARQM 382


>gi|224825888|ref|ZP_03698992.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602112|gb|EEG08291.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 386

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 142/383 (37%), Gaps = 25/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD+ E  P    ++RR+   G        ++  +   +             
Sbjct: 22  HELAPHAAEWDEREEFPL--DVIRRAGEMGFLSLYTPEAYGGLGLSRLDAAIVFEELAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  ++     + M+A    P V + W P++ +              +      LTE
Sbjct: 80  CTSTAAYLTIHNMVSWMIASFAKPEVAEHWVPQMVTG-------------AKLGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A++ +  +K  D +Y L+G K F+S   S   +++    G  G   V   +  
Sbjct: 127 PGAGSDAASLKTHAEKKGD-VYLLNGSKMFISGAGSTEVLVVMARTGGPGPKGVSAFVVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y + + K+G  S  T  + F N        L     G    MK L    ++ A
Sbjct: 186 ADAPGIQYGKKEKKMGWNSQPTRAVTFDNVEIPAANLLGEEGQGFTFAMKGLDGGRINIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +LA A  Y + R   G  L D   ++  +AD+  ++ AA  +    A   D
Sbjct: 246 TCAVGTAQAALAAAQRYVQERQQFGHALADFQTVQFKLADMLTELVAARQMVRLAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A     + K     +A  V  +A++  GG GY+++  + RH R+   + 
Sbjct: 306 SGSPD------ATAYCAMAKRLATDLAFNVANQALQLFGGYGYLKDFPLERHVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           IL G+   M + V   L K   L
Sbjct: 360 ILEGTNEVMRMIVARHLLKDGAL 382


>gi|320165123|gb|EFW42022.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 401

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 121/359 (33%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL  +     +        H   A    L  QL        S      + 
Sbjct: 64  REVWEKAGAAGLLGTTIPVEYGGGGGDAFHAAIAVEEQLRLQLSGPGFSLHSDIIIPYIL 123

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P +                     +G++E   G+D+  I +   +  D
Sbjct: 124 HYGSEEQKQKWIPLMCQG-------------KAISAIGMSEPSAGSDLQGIKTTAVRDGD 170

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+S+  M+D  +++A+ +   G      +L +    G    R   K+G +
Sbjct: 171 D-YVINGSKIFISNGQMADIIVLVAKTDPSKGAHGTSLILVETDRPGFQRGRNLKKLGLK 229

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F N       LLG  N     +        L   ++S +      A+ + Y 
Sbjct: 230 AQDTSELFFDNVRVPASNLLGKENHGFKYLMQELGTERLVIGVLSQASAEGVFADTVKYV 289

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +      K  +A++   ++       R     ++ K     AA       I
Sbjct: 290 NERQAFGKSIASFQNTKFKLAEMKTQLSVGRVFIDRCLELQNQGKLDPVAAA-------I 342

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K     M   +  E ++  GG G++ E + AR Y ++    I  G+   M   +   L
Sbjct: 343 AKLHAGDMLAKITDECLQLHGGYGFMWEYTAARAYADARVQRIYGGTSEIMKDIISRTL 401


>gi|302518188|ref|ZP_07270530.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302427083|gb|EFK98898.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 383

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 139/400 (34%), Gaps = 28/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  LS   +   R+A     +     P    WD+ E       ++ +    G      D 
Sbjct: 2   DLRLSEEQEAARRLARDFVERQVV--PYAREWDRAENVD--RGIVAKLGEVGFLGLTIDE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSR 181
            +                   A      ++S S+   A  +A        + W P + S 
Sbjct: 58  EYGGSGGDHLTYCLVTEELGRADSSVRGIVSVSLGLVAKTLAAWGDAEQKRRWLPGLTSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            Y                  LTE   G+D  A+T++  +  D      G  +  +   +D
Sbjct: 118 RY-------------VGCFALTEPGTGSDAGALTTRAVRDGDDWLLTGGKMFITNGTWAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+     G   V   L      G   + L  K+G R  AT EL           L
Sbjct: 165 LALVFARSNDAPGHKGVSAFLVPTGTPGFARRTLHGKLGLRGQATAELVLDGVRVPGSAL 224

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 +  A   V   + +L  A+ +A+ R   G  +    +++  
Sbjct: 225 LGPEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQEL 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +ADIALD+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++ 
Sbjct: 285 LADIALDVDAARLLTWRVADLVDRGEPFTGAASRA-------KLFASEAAVRAANNALQV 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 338 HGGYGYIDEYPVGKLLRDARVMTLYEGTSQIQKLLIGREL 377


>gi|13474682|ref|NP_106251.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025437|dbj|BAB52037.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 596

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/552 (17%), Positives = 184/552 (33%), Gaps = 65/552 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK 96
           +L  ++                 VL     E A++A      +H     G+     R D 
Sbjct: 14  VLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAEN---VMHPLNRVGDMEGCVRHDD 70

Query: 97  --VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
             V     +     +    G         F       A     A   + A +        
Sbjct: 71  GSVTTPKGFKEAFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  + + +    T      W PK+    +  T             + LTE   GTD+  +
Sbjct: 131 TQGAIAAIITHGTDEQKAKWLPKMVEGAWTGT-------------MNLTEPHCGTDLGLL 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++     +G Y +SG K F+S+   D       ++LA++EG       +  F+VP+   
Sbjct: 178 RTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKL 237

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           D     G  N L    ++ K+G   N+T  + +    G LLG+ N     +  M     L
Sbjct: 238 DASGNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              +  +S   ++   A+ YA+ R                  +I  P ++R++  +    
Sbjct: 298 GVGLQGLSLSEIAYQNAVAYAKDRLQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFN 357

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            A  AL+   A   D      + K R     Y  +M P+ K             A +  G
Sbjct: 358 EAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVMAQQVFG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DL 476
           G GYIEE  +++  R++    I  G+     LD++   L   G    +  F  + +  + 
Sbjct: 418 GHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEE 477

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTE-KIA---LASSAAALYRAGMNDIADVFLEN 532
             + +K+    +       + +    +L +  +A    A +A+  Y      +A  ++  
Sbjct: 478 NRADEKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWA 537

Query: 533 RFLDNCHSTHCM 544
           +           
Sbjct: 538 QMAKAAQGKTGA 549


>gi|195127930|ref|XP_002008420.1| GI11829 [Drosophila mojavensis]
 gi|193920029|gb|EDW18896.1| GI11829 [Drosophila mojavensis]
          Length = 414

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGTKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T  + F N     
Sbjct: 193 VAGVFLVFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCMITFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + +    V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIFNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA IA +I AA  L++  A   +      +EAA A       K++  ++A    
Sbjct: 310 QSMQHQIATIATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 363 TKCIDWMGGVGFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|21326612|gb|AAL03980.1| acyl-CoA dehydrogenase [Azospirillum brasilense]
          Length = 596

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 89/458 (19%), Positives = 169/458 (36%), Gaps = 63/458 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +       I  G      D ++      +            A L  G     S+
Sbjct: 72  VRTPKGFKEAYSTYIEAGWQGLSCDPAYGGQGLPKLVNTMLEEFICSANLSFGMYPGLSL 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + + ++   +  + + +  ++    +             A  + LTE   GTD+  I +
Sbjct: 132 GAYNALSTYGSEELKQRFLGRLVDGTW-------------AGTMCLTEPHCGTDLGLIRT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED- 264
           +     DG + ++G K F+S+   D       ++LA++         +  FLVP+ L   
Sbjct: 179 KAVPQEDGSHKITGTKIFISAGEHDLTENILHLVLARLPDAPAGTRGISLFLVPKFLPKE 238

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  NG+    +++K+G +++AT  + F +  G+L+G+ +     +  M     L  
Sbjct: 239 DGSVGPRNGVACGSIEHKMGIKASATCVMNFEDATGWLVGEPHKGMRAMFVMMNAARLAV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            I  +    VS   A+ YA+ R                  +I  P ++R +         
Sbjct: 299 GIQGLGVAEVSYQNAVAYAKERLQGRSLKGTAHPDKPADPIIVHPDVRRNLLTARAYTEG 358

Query: 369 ATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A AL         +A    + K+R E   + ++M PI K     +       A++  GG 
Sbjct: 359 ARALGALVGYKLDVAEKHADEKTRKEADEFVQLMTPIVKALFTDIGFESANIAVQVHGGH 418

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           G+I E  + ++ R++    I  G+     LD++                L QD+G   ++
Sbjct: 419 GFIWETGVEQYVRDARICQIYEGTNGIQALDLVG-------------RKLPQDMGRLLRR 465

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
               +   I    E + LA F+   + LA + A L +A
Sbjct: 466 FFHPVGAEIEADMEREELAEFV---LPLAKAFAKLQQA 500


>gi|218777915|ref|YP_002429233.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759299|gb|ACL01765.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 595

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 92/490 (18%), Positives = 180/490 (36%), Gaps = 55/490 (11%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGP-GGERWDK-VEFHPAWHALLRRSI-HDGL 115
           E L E  L     E  R A      L+  G   G  W+      P       ++   DG 
Sbjct: 31  ESLNEDALDMLVNEAIRFAKGVVSPLNEIGEEQGVHWENNTVTCPKEFKTAFKAYGEDGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
             ++ D  F         +I    L   A        S +  +A ++    T    + + 
Sbjct: 91  TAAVRDPEFGGQGFPTMMRIVVNDLMYGACQSFNMAPSLTHGAAHLIESFGTDEQKQTYI 150

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK++  E+  T             + LTE   G+++AA+ +      D  Y + G+K F+
Sbjct: 151 PKMYGGEWAGT-------------MALTEPNAGSNLAALETMAYPEGDH-YKIKGNKIFI 196

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S    D       + LA++EG       +  F+VP+   D     G  N +    ++ K+
Sbjct: 197 SWGDHDLAGNIVHLALARIEGAPEGVRGISLFIVPKYRVDENGNPGEFNDVVCTGIEKKL 256

Query: 280 GNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  S+ T  L F       G+L G  N+    +  M     +++ +  +S    +   A+
Sbjct: 257 GLHSSPTAALAFGGKDGCIGYLCGKANMGLAHMFQMMNAARINTGVSGMSMASAAYQHAL 316

Query: 337 HYAR---------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            Y +         +R      +ID P ++R +  +   +    ++ +  A   D A+  +
Sbjct: 317 DYTKSRVQGRDIAKRKQGSVPIIDHPDVRRMLLWMKGAVDGMRSMIYTTAFWADLAQVTT 376

Query: 388 EEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +             M PI K +C  +   V   AM+C+GG G+ ++  I ++ R+S   S
Sbjct: 377 DPEEKERCTMLMEFMTPIVKSYCSDIGFKVCETAMQCLGGYGFCKDYPIEQYLRDSKIMS 436

Query: 442 ILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKED 497
           +  G+       L    +       ++     +    +   +   + + +R    +  + 
Sbjct: 437 LYEGTNGIQSTDLMGRKMHMNEGAPYKAFLKEITDFCEKNHAHPGLGSQVRFLKDVMDDL 496

Query: 498 KGLARFLTEK 507
           + +AR ++ +
Sbjct: 497 QEMAREMSSR 506


>gi|149201869|ref|ZP_01878843.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149144917|gb|EDM32946.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 380

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 139/381 (36%), Gaps = 27/381 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    W++    P    L       G                +           MA 
Sbjct: 23  RIAPHARDWERAGTIP--KELWPEIAALGFGGLYVSEEAGGSGLTRLEATLVFEALSMAC 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+    +  +     P+  + E               +   LTE 
Sbjct: 81  PSVAAFLSIHNMCAKMIDKFGSDAMKARVLPRALTME-------------TVLSYCLTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA+ ++ ++ + G Y L+G K F+S    SDA+I++ +  G  G   +  +  +
Sbjct: 128 GSGSDAAALKTRAERTNAG-YTLNGTKAFISGGGYSDAYIVMVRT-GGDGPKGISTVYVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL Y  L++K+G RS  T +++F N       L+G+         +      L+ A
Sbjct: 186 AGTEGLSYGGLEDKMGWRSQPTRQVQFDNCNISAENLVGEDGKGFTYAMNGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  L + + Y   R   G  +     ++  +AD+ +++ AA     + A   D
Sbjct: 246 ACSLGAAQQGLTQTLAYMAERRAFGKPIDQFQALQFRLADMEIELQAARTFLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  +A  A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 N------DAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYGIEKLVRDLRVHE 359

Query: 442 ILLGSGNAMVLDVLNLLEKGT 462
           IL G+   M L V   +  G 
Sbjct: 360 ILEGTNEIMRLIVARQMLAGQ 380


>gi|221069272|ref|ZP_03545377.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714295|gb|EED69663.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 395

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q+    P     D+ +  P    L R+    G+        +   
Sbjct: 14  GEDIDALRDAVREFAQIE-IAPRAAEIDRSDQFPM--DLWRKFGELGVLGITVSEQYGGA 70

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    +      + PK+ S E+   
Sbjct: 71  DMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGSEAQKAKYLPKLISGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N         N+  
Sbjct: 178 AKTEPEMGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGELVFQNVEVPA---ENILG 234

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+L+  LD     ++G  + + ++     + Y   R   G  + +  +++  +A
Sbjct: 235 GLNMGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLVQGKVA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A  + ++ +A + D     +E     R        WC + A  +  E ++  G
Sbjct: 295 DMYTVLQAGRSFAYTVAKNLD--LLGTEHVRQVRKDCASVILWCAEKATWMAGEGVQIYG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E  + R +R++    I  G+     + +   L
Sbjct: 353 GNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|91781760|ref|YP_556966.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685714|gb|ABE28914.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 387

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 142/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D  + +PA   ++ +    GL   I D  +  +        +         +  
Sbjct: 29  PYVHKFDHDDIYPA--EIVEKMKEMGLFGCIIDPEYGGLGLSTRTYAQIIARISRVWMSV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++  +  A +V    TP     + PK  + E+               G+GLTE   G
Sbjct: 87  SGIINSHLILAMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           TD+ AI +  +++ D         W  +S   +   +L + +   +     +  LL    
Sbjct: 134 TDLQAIRTTAKRVGDEYVVNGNKTWITNSKHGNTLALLVKTDTTAQPRHRGMSLLLVQKG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           P G    R   K+G +   T EL F+     T   + G        +     L  ++ A 
Sbjct: 194 P-GFEVSRQLEKLGYKGIDTCELSFNGYHVSTDALIGGVEGKGLQQILGGLELGRINVAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   + +L E++ Y+++R   G  + +   ++  + ++A  + A   L    A  +D 
Sbjct: 253 RGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQKYDR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P  +I
Sbjct: 313 GERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPLLTI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTNEMQRIIIAKQL 381


>gi|184159570|ref|YP_001847909.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332876055|ref|ZP_08443839.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183211164|gb|ACC58562.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509480|gb|ADX04934.1| Acyl coenzyme A dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519501|gb|ADX93882.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735673|gb|EGJ66716.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 390

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGAGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      + K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|260222383|emb|CBA31892.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 393

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 142/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 12  GEDIDALRDAVREFAQAE-IAPRAAEIDRTDQFPM--DLWRKMGDLGVLGITVGEEYGGA 68

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    TP     + PK+ + E+   
Sbjct: 69  NMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIKRNGTPEQRAKYLPKLITGEH--- 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 126 ----------VGALAMSEPGAGSDVLSMKLKAEDKGGYYLLNGNKMWITNGPDADTLVVY 175

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L + S  G    +  +K+G R + T EL F+N    L   L    
Sbjct: 176 AKSEPELGARGVTAFLIEKSMPGFSIAQKLDKLGMRGSHTGELVFNNVEVPLANVLGQVN 235

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G  + +   +  + A++S   +  M+  +   I Y   R   G  + +  +++  +AD+ 
Sbjct: 236 GGAKVLMSGLDYERAVLSGGPLGIMQSVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMY 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  A ++ +A + D     +E     R        W  + A  +  E ++  GG+G
Sbjct: 296 TVLQAGRAFAYTVAKNLD--LLGAEHVRQVRKDCASVILWTAEKATWMAGEGVQIFGGNG 353

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 354 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|138896595|ref|YP_001127048.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196249296|ref|ZP_03147994.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|134268108|gb|ABO68303.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196211053|gb|EDY05814.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 594

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 90/446 (20%), Positives = 167/446 (37%), Gaps = 60/446 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +      A     A   A    +     +  + L
Sbjct: 66  KLLRKAGELGLLSADIPEEYGGLGLDKVSSAIIAEHMAPAGGFAISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQKYLPYLATGE-------------KIAAYALTEPGSGSDALGAKTTAKLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  +S  +D F++ A+V+G+         + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNSGFADVFVVYAKVDGQH----FTAFIVERDFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENVLGEIGKGHVIAFNILNIGRYKLGLGAVGGAKRALEITLKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + AA +  +R    FDE             K  +
Sbjct: 289 NQRQQFKRPISKFTLTQEKFATMAARLYAAESSVYRTVGLFDERMGLLDAEKAKDGKEIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  ++   ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFSTEVLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L L +K   L E+L     ++ GS              + +
Sbjct: 409 EINRLLVPGMYLKKAMKGELPLFQKAQQLQEELMMMTAEEPGS-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAG 521
           ++K L R   +KIAL  +  A+ + G
Sbjct: 456 QEKYLVRN-AKKIALMVAGLAVQKYG 480


>gi|297198581|ref|ZP_06915978.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197715453|gb|EDY59487.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 384

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 139/397 (35%), Gaps = 35/397 (8%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              + LAR        P + A+    E  D+        +L+++    G      D  + 
Sbjct: 11  AAVRRLAREFVDREIAPHVIAWDR-AEEVDR--------SLVKKLGEVGFLGLTIDEEYG 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  VA   T    + W P + S EY 
Sbjct: 62  GSGGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVAAWGTEEQKRHWLPGLTSGEY- 120

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D   + ++  +  D         +  +   +D  +
Sbjct: 121 ------------VGCFGLTEPGTGSDAGNLATRAVRDGDDYVIDGTKMFITNGTWADVVL 168

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+     G   V   L      GL  + +  K+G R  AT EL            +  
Sbjct: 169 LFARSTDAPGHKGVSAFLVPTDTPGLTRRTIHGKLGLRGQATAELVLEGVRVPASAMVGE 228

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  I+D
Sbjct: 229 EGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAALRYAGEREQFGKPIAGHQLVQELISD 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           IA+D+ AA  L++R+A+  D  +  + E++ A       K +  + A      A++  GG
Sbjct: 289 IAVDVDAARLLTWRVADLIDRGEPFAVESSKA-------KLFASEAAVRAANNALQVFGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GYI+E    +  R++   ++  G+     L +   L
Sbjct: 342 YGYIDEYPAGKLLRDARVMTLYEGTSQIQKLVIGRAL 378


>gi|163739943|ref|ZP_02147349.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
 gi|161386817|gb|EDQ11180.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
          Length = 590

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/513 (20%), Positives = 193/513 (37%), Gaps = 67/513 (13%)

Query: 58  LELLGEYV---LSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSI 111
           LE  GE          +EL R        L A     G R D  KV    A+ A   + +
Sbjct: 26  LEKYGEIDRTDARAALEELGRFCTDLIAPLSAVGDTTGARLDGDKVVLPEAFAAAYAQFV 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G            +   +     A  +   A +  G     +  +   + L  T    
Sbjct: 86  DMGWQSLAHPVDHGGMGLPRVVGAAATEILNAADMSFGLCPLLTDGAIDALQLSGTEAQK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +   + S  +  T             + LTE + G+D+  +  + +  +DG Y +SG 
Sbjct: 146 ELYLRPLVSGRWTGT-------------MNLTEPQAGSDLGRVRCKAEPRADGSYGVSGT 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    +       ++LA+  G       +  FLVP+ L D     G  N +    +
Sbjct: 193 KIFITYGAHELSENIIHLVLARTPGAPDGHRGLSLFLVPKFLVDQDGTPGDRNSVNCVSI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G R++ T  LE+ N  G+L+G+ N     +  M         +  V+    +   A
Sbjct: 253 EHKLGVRASPTAVLEYDNATGYLIGEENRGLEYMFTMMNAARFAVGVQGVAVSERAYQHA 312

Query: 336 IHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           + YA+ R     I         +I  P ++R +  +   +    +LS   A   D     
Sbjct: 313 LSYAKERVQGQAIGLAPDKTTAIIGHPDVRRMVLRMRALVEGGRSLSMAAAGWLDLSQNG 372

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   R+E A  A  + P+ K +C + A  V +  ++  GG G+IEE  +A+ YR++    
Sbjct: 373 DDDIRAETAPVAEFLVPLVKAFCSERAVEVASLGVQIHGGMGFIEETGVAQFYRDARILP 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE----D 497
           I  G+      D+L                + +D G + ++   ++ D+ +  +      
Sbjct: 433 IYEGTTAIQANDLLG-------------RKVLRDAGQTARRFSAMIADTEAALQTGSAKL 479

Query: 498 KGLARFLTE-KIALASSAAALYRAGMNDIADVF 529
           + +A  L E + A  +S A L     ND    F
Sbjct: 480 QDIAARLGEARAAFDASLAWLLETAPNDPRAAF 512


>gi|16554489|ref|NP_444213.1| Acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169235992|ref|YP_001689192.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167727058|emb|CAP13843.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 381

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 140/402 (34%), Gaps = 35/402 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +    Q  A   N   P    +          E  P  H ++ ++   GL       
Sbjct: 9   QRAIKAEVQRFAD--NEIRPVATEHDT-------AESFP--HEVMDKAADAGLLGPGIPM 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           ++                   A    G  ++ +   A  +    T    + +        
Sbjct: 58  AYGGAGYSPVEVAIIVEELFAADPGIGLCVASAGFGAEAITAFGTDDQKRRFLE------ 111

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+      +G  ++E   G+D+A++++  +K  D         W  +  + D 
Sbjct: 112 -------PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGDEWIIDGNKMWITNGSVGDY 164

Query: 243 FIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           F++L + +           +++ +   +G   +++  K+G R++ T EL           
Sbjct: 165 FVVLCRTDPDASGRYEGFSQIVVESDRDGFTAEKITGKLGIRASDTAELVLDAVRVPEEN 224

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G ++ M+         A   V   R +   A+ YA+ R   G  + D   ++ 
Sbjct: 225 LIGTRGGGFLQLMQFFDETRTTVAAQGVGIARGATERALAYAQEREQFGQPVADFQAIQH 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++     AA  L+ + A S D    +         +A + K +  ++A  V  EA++
Sbjct: 285 KLAEMQTKTEAARTLTRKSAWSVDHRDDQ------LTALASMAKSFASRIAVEVADEAVQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             GG+GY+ +  + R YR++    +  G+       +   + 
Sbjct: 339 IHGGAGYVNDFDVERFYRDAKITQLYEGTTEIQKNVIAREMM 380


>gi|33598844|ref|NP_886487.1| isovaleryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574974|emb|CAE39638.1| isovaleryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 392

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 134/379 (35%), Gaps = 21/379 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 31  PRAAEIDRSDQFPM--DLWRKFGDLGVLGMTVSDEYGGTGLGYLAHMVVMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIFRNGSEAQKARYLPKLVSGEH-------------VDALAMSEPGT 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +  D         W  + P +D  ++ A+ +       +   L +   
Sbjct: 136 GSDVVSMRLRADRKGDRYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGITAFLVEKGF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V  +   +  + A++S   
Sbjct: 196 KGFSVAQKLDKLGMRGSHTGELVFEDCEVPEENVLGQVNGGVRVLMSGLDYERAVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + A+ A  + +  + D+  
Sbjct: 256 LGIMQGVMDVVVPYIHDRKQFGQAIGEFQLIQGKIADMYSVLQASRAFCYAVGRNLDQLG 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +        R        +  + A  +  E ++ +GG+GYI E  + R +R++    I  
Sbjct: 316 AGHVRQ--VRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYPVGRMWRDAKLYEIGA 373

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 374 GTSEIRRMLIGRELYAETA 392


>gi|254459770|ref|ZP_05073186.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206676359|gb|EDZ40846.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 387

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 150/404 (37%), Gaps = 37/404 (9%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P   + D     P    L       GLH    D  F+ 
Sbjct: 9   DLGEDINALRDMVHRWAQERVKPMAGQIDAENSFP--PELWAEMGALGLHGITVDEEFDG 66

Query: 127 V-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             +   AH I    +   +   +    + S    + ++L  T      + PK+ S E+  
Sbjct: 67  SNMGYLAHVIAVEEIARASASVSLSYGAHSNLCVNQISLNGTSEQKARYLPKLVSGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++    +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEPNAGSDVVSMKLHAEKRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L + S  G       +K+G R + T EL F +         NV 
Sbjct: 174 YAKTDPDAGSKGMTAFLIEKSMTGFSTSNHFDKLGMRGSNTAELIFEDVQVPF---ENVL 230

Query: 306 TGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               + +++L+  LD        +    M   L E + Y   R   G  + +  +M+  I
Sbjct: 231 GEEGKGVRVLMSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKI 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   +  A A  + +A + D+ +   ++AA           +  + A  V  +A++ +
Sbjct: 291 ADMYTKMNTARAYVYEVAKACDKGQVTRQDAA-------ACVLYASEEAMVVAHQAVQAM 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GG+G++ +  +AR +R++    I  G+     + +   L    +
Sbjct: 344 GGAGFLNDSPVARIFRDAKLMEIGAGTSEIRRMLIGRELMGAMS 387


>gi|167033440|ref|YP_001668671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859928|gb|ABY98335.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 383

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 131/357 (36%), Gaps = 26/357 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           R+    GL   +    F            A           G +MS   +      L   
Sbjct: 44  RKMGELGLLGMVVPEDFGGSYTDYVAYALAVEEIAAGCGATGAMMSIHNSVGCGPLLAYG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E             V     LTE + G++   + ++ + + DG +
Sbjct: 104 TAEQQQQWLPRLASGE-------------VIGCFCLTEPQAGSEAHNLRTRAELV-DGQW 149

Query: 227 CLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            ++G K F+S+       I+ A  +  +G   +   L      G    R ++K+G R++ 
Sbjct: 150 VINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVPTDNPGFKVDRSEHKMGIRASD 209

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F N        L     G    +  L    +  A  ++   R +   A+ Y+R R
Sbjct: 210 TCAVTFDNCRIPAANLLGERGKGLAIALSNLEGGRIGIAAQALGIARAAFEAALVYSRDR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +   +   +AD+ + + AA  L    A      K    E       A   K 
Sbjct: 270 VQFGKPINEHQSIANLLADMQVQVNAARLLILHAARLRSAGKPCLSE-------ASQAKL 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +  +MA  V + A++  GG GY+E+  + R+YR++    I  GS     + +   L+
Sbjct: 323 FASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRMLIARELK 379


>gi|89092176|ref|ZP_01165131.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89083911|gb|EAR63128.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 592

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 92/496 (18%), Positives = 186/496 (37%), Gaps = 52/496 (10%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDG 114
           LE   + +      E  ++ N     L+      G     ++V     +    ++    G
Sbjct: 30  LEEFADGLAEAVLDEAGKLGNEQLAPLNIVGDQKGAAIQNNQVTETEGFSEAYQQFCEGG 89

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                 +  F          +    ++  A L        +  +   +    + ++ + +
Sbjct: 90  WPSLAHNPEFGGQGLPNTLAVAVNEVWQSANLAWSLCPLLTQGAIEAIEAHGSEQLQQFY 149

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+  T             + LTE   GTD+AA+ ++     D  Y ++G K F
Sbjct: 150 LPKLISGEWTGT-------------MNLTEPDAGTDLAALKARAVPEGDH-YRITGQKIF 195

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS------PNGLCYQRLKN 277
           ++            ++LA++         +  F+VP+ L D +       N      L++
Sbjct: 196 ITWGDHQMTDNIVHLVLARLPDAPPGVKGISLFVVPKFLLDENGELTDKRNDAYAVALEH 255

Query: 278 KIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G   + T  + F       G+L+G+ N     +  M         +  ++    +   
Sbjct: 256 KLGIHGSPTCVMSFGENEGAIGYLVGEENNGLACMFTMMNDARQGVGLQGLAISERAYQH 315

Query: 335 AIHYARRRHVS----GGIL--IDQPVMKRAIADIALDIAAATALSFRLANSFD------E 382
           A+ YA+ R       G  +  I+ P ++R +  +     A  AL++      D       
Sbjct: 316 ALAYAKDRVQGTLRDGSRITIINHPDVRRMLMQMKAGSQAMRALTYVAKAESDYYHNATC 375

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A+ +++  A   ++ PI K W  ++A  +    ++  GG G+IEE   A+HYR++   +I
Sbjct: 376 AEQKAQHKARTELLTPIVKGWITELAQEITYLGVQIHGGMGFIEETGAAQHYRDARILTI 435

Query: 443 LLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKG 499
             G+     LD++    L         L   ++ DL + S  ++  ++     +  E K 
Sbjct: 436 YEGTTGIQALDLIGRKTLVDNGAALTALLDEIQGDLNAISSPELQDVVESFQDVLNEAKE 495

Query: 500 LARFLTEKIALASSAA 515
              ++ +  A  SSAA
Sbjct: 496 AKNWVLDVAANDSSAA 511


>gi|113970657|ref|YP_734450.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4]
 gi|113885341|gb|ABI39393.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4]
          Length = 389

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 152/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +  + H   P   + D     P  + +       GL     
Sbjct: 12  LGEEV------DMLRDAVQDFAK-HEIAPIAAKVDHDNAFP--NEIWPVLGGMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  PEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDHYILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 ANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|307296783|ref|ZP_07576601.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306877696|gb|EFN08922.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 380

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 142/371 (38%), Gaps = 28/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +RW++         L R     GL C      +  +     +        L        L
Sbjct: 34  DRWEEEGIVD--RDLWRACGAAGLLCPTLPEQYGGLGLDYGYNAVIDE-ELAYLGATLGL 90

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S  +A  +    +    + W PK+ S E             V   + +TE   G+D+
Sbjct: 91  GLQSDITAEYILHYGSEEQKQFWLPKMISGE-------------VITAIAMTEPGAGSDL 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + +  ++  D  Y ++G K F+SS   +D  I++A+ +   G   V  +L + +  G 
Sbjct: 138 QGVKATARRDGDE-YVINGSKTFISSGQNADLIIVVAKTDADAGAKGVSLILVEATREGF 196

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R  +KIG R+  T EL FS+       LLG        +        L  AI + +G
Sbjct: 197 KRGRNLDKIGQRAADTSELFFSDVRVPASNLLGQEGKGFTYLMTQLPQERLSIAISAQAG 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +  EA+ Y + R   G  + D    +  +A++A  +    A         D A SR 
Sbjct: 257 AQRAFDEAVAYTKDRKAFGRTVFDFQNTRFTLAELATRLQVGWA-------HLDWALSRH 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                    A   K +  ++   V  +A++  GG+GY+ E +IAR +R++    I  G+ 
Sbjct: 310 LRGELTAAEASAAKLFHSELNFEVCDKALQLHGGAGYMNEYAIARLWRDARVQRIYGGTS 369

Query: 448 NAMVLDVLNLL 458
             M   +   +
Sbjct: 370 EIMKEIISRDI 380


>gi|195020760|ref|XP_001985263.1| GH16965 [Drosophila grimshawi]
 gi|193898745|gb|EDV97611.1| GH16965 [Drosophila grimshawi]
          Length = 414

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVLNGTKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T  + F N     
Sbjct: 193 IAGVFLVFANAKPEDGYRGITTFIVDRDTPGLIVNKPEDKLGIRASGTCMVTFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + +    V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIYNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA IA +I AA  L++  A   +      +EAA A       K++  ++A    
Sbjct: 310 QSMQHQIATIATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 363 TKCVDWMGGVGFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|161520205|ref|YP_001583632.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353617|ref|YP_001949244.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344255|gb|ABX17340.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337639|dbj|BAG46708.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 377

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD+    P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDRDAQLPD--AVVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPEQKARWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    V     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 112 -GDMAAGRVIGAFCLTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  +   N     + + N+  
Sbjct: 170 AMTDPDAGKRGISAFLVPTDTPGFIIGKPEKKMGIRASDTCPITLENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLYASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|153011352|ref|YP_001372566.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563240|gb|ABS16737.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 597

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/562 (17%), Positives = 182/562 (32%), Gaps = 68/562 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN-YNTPQLHAYG 88
                N      +L  ++                 V+     E A++A     P      
Sbjct: 7   PVEDTNF-----VLNDVLNYQRYNNLPGFADASPDVVEAILSEGAKLAEGTLFPVNQTAD 61

Query: 89  PGGERW---DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
             G +      V     +          G         +        + +  A    M+ 
Sbjct: 62  REGCKRHSDGSVTTPKGYKQAYDLYREGGWLGLAVPEQYGGQGLP--YLLHTAVGEYMSS 119

Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 M P +T  ++ A+    T      + PK+    +  T             + LT
Sbjct: 120 ANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLT 166

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------R 252
           E   GTD+  + +      DG Y +SG K F+S+   D       ++LA+++G       
Sbjct: 167 EPHCGTDLGLLRTSAAPQKDGSYKISGQKIFISAGEHDMSENIIHLVLARIDGAPEGVKG 226

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+VP+ + D     G  NG+    ++ K+G   N+T  + +    GFL+G+ +    
Sbjct: 227 ISLFIVPKFILDENGNPGERNGVSCGSIEEKMGIHGNSTCVMNYDEAKGFLIGEAHKGLR 286

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L  A+  +S    +   A  YAR R                  +I  P +
Sbjct: 287 AMFTMMNEARLGVALQGLSIAETAYQNAAIYARERIQGRALSGAAAPDKKADPIIVHPDI 346

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAP 409
           +R + +I     A  AL    A + D A    +EA          ++ P+ K        
Sbjct: 347 RRNLMNIRAFNEAGRALILWTALNSDIAHRAGDEAERQAADDLVGLLTPVLKGVLTDKGF 406

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
                A +  GG GYIEE  ++++ R++    I  G+     LD++   L   G      
Sbjct: 407 EHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKLALNGGRAITA 466

Query: 468 LFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAG 521
            F  +    +     +K+    +       + +    +L +        A +A+  Y   
Sbjct: 467 FFKEVGDFCEANRENEKLSFFTKHLKKGLNDLQAATMWLMQNAMAKPDNAGAASNDYMHL 526

Query: 522 MNDIADVFLENRFLDNCHSTHC 543
              +A  F+  R          
Sbjct: 527 FGLVALGFMWARMAKIAEEKLG 548


>gi|121701011|ref|XP_001268770.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119396913|gb|EAW07344.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 437

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 137/381 (35%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      AL+ +    GL        +          I A       
Sbjct: 76  EQIGPKVRDMDEAEVMD--PALVEQLFEQGLMGIEIPEEYGGAGMNFTAAIVAIEELARV 133

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +         ++ K W PK+               T       L+
Sbjct: 134 DPSVSVLVDVHNTLVNTAFNNWADAQLKKTWLPKL--------------ATDTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 180 EPASGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFIVFANLDPSKGYKGITAFVV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    G    + + K+G R+++T  L F +     G LLG+          +     +  
Sbjct: 240 EKGTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGI 299

Query: 321 AIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           A         +   A  Y    R   G ++     M+  +A   ++IAAA AL +  A  
Sbjct: 300 AAQMTGLALGAWENAASYVWNDRRQFGQLIGTFQGMQHQLAQAYVEIAAARALLYNAARK 359

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+S  
Sbjct: 360 KEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKI 412

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 413 GAIYEGTSNIQLQTIAKLLQK 433


>gi|56698615|ref|YP_168992.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56680352|gb|AAV97018.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 588

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/507 (18%), Positives = 174/507 (34%), Gaps = 60/507 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVE 98
            L              LE  G +     A             L       G R +  +V 
Sbjct: 25  ALQTYSEIELDDARAALEEFGRFCGEMIA------------PLSTIGDTEGARLENGRVV 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +     + +  G            +   +     A  +   A +  G     +  +
Sbjct: 73  LPEGYKTAYDQFVDMGWQSLSHPAEHGGMGLPKVVGAAATEIVNSADMSFGLCPLLTNGA 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +++  +      +  K+ +  +  T             + LTE + G+D++ +    
Sbjct: 133 IDALSITGSDAQKAFYLDKLITGRWSGT-------------MNLTEPQAGSDLSRVRCTA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL----- 262
               DG Y +SG K F++    D       ++LA+          +  F+VP+LL     
Sbjct: 180 VPQDDGTYAISGTKIFITFGEHDLSENIVHLVLARTPDAPEGVRGLSLFVVPKLLAGEGG 239

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           E    N L    L++K+G R++ T  +E+ N  G+L+G+ N     +  M         +
Sbjct: 240 ETSQRNTLGCVSLEHKLGVRASPTAVMEYDNATGYLVGEENSGLRYMFIMMTSARYAVGV 299

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALS 373
             V+    +   A+ YAR R  S            +I  P ++R +  +        AL+
Sbjct: 300 QGVAIAERAYQHALSYARDRIQSRPVDGSAQDAVPIIQHPDVRRMLLRMRALTEGGRALA 359

Query: 374 FRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                  D A+   EEA     + A  + P+ K +C + A  V +  ++  GG G+IEE 
Sbjct: 360 IATGGWLDLAEHGPEEARAEAQSMAEFLVPLVKGFCTERAVEVASLGVQIHGGMGFIEET 419

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            +A+ YR++    I  G+      D+L   +L  G     +    +    G   K     
Sbjct: 420 GVAQFYRDARILPIYEGTTAIQANDLLGRKVLRDGGRTARRFAEMIAATEGELSKGGAAA 479

Query: 487 LRDSISLCKEDKGLARFLTEKIALASS 513
            R +  L +     A  L   +A A  
Sbjct: 480 QRIAQRLAEARAAFAAGLDHLLATAGQ 506


>gi|254702046|ref|ZP_05163874.1| Acyl-COA dehydrogenase, short-chain specific [Brucella suis bv. 5
           str. 513]
 gi|261752613|ref|ZP_05996322.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261742366|gb|EEY30292.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 385

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 144/394 (36%), Gaps = 34/394 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            QE+A+   A+   PQ   +          +  P    +LR +   G+            
Sbjct: 18  IQEMAQAFAADRIAPQALQWDRD-------KHFPV--DILRETGPLGMGGIYVRDDVGGS 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             K+   +        A       +S    +A M+         + + P++ S E+    
Sbjct: 69  GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEW---- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D AA+ ++  +  D  Y ++G K F+S   S    +  
Sbjct: 125 ---------LASYCLTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTM 174

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
              G  G   +  L+      GL +   + K+G  +  T  + F N    +   LGD  V
Sbjct: 175 VRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGV 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        L+ A  S+ G + + A+A+ Y   R   G  +     ++  +AD+  
Sbjct: 235 GFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMET 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++AA+  L +  A+  D           A   + + K +    +  V  EA++ +GG GY
Sbjct: 295 ELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRFVTDTSFNVANEALQLLGGYGY 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  I +  R+   + IL G+   M + +   +
Sbjct: 349 LHDYGIEKLVRDLRVHQILEGTNEIMRVIIALHM 382


>gi|108801042|ref|YP_641239.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870184|ref|YP_940136.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436879|ref|YP_001072570.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771461|gb|ABG10183.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696273|gb|ABL93346.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236679|gb|ABO00080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 64/297 (21%), Positives = 114/297 (38%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           T     + W P I S E             + I + +TE   G+D+A I +   +  D  
Sbjct: 103 TNDEQKQRWMPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++A+ +   G       + +    G    R  +K+G  S 
Sbjct: 149 WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERGMEGFTRGRKLDKMGLHSQ 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R    E + Y + 
Sbjct: 209 DTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSIAISAIAGARAVFDETLQYCKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R      + +  + EAA A+       
Sbjct: 269 RKAFGQPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGELTAVEAAKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            W  + A  ++   ++  GG GY+ E  +AR Y +    +I  G+   M   +   L
Sbjct: 323 -WATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGRDL 378


>gi|260555403|ref|ZP_05827624.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411945|gb|EEX05242.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 390

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKDM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGVKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|254428961|ref|ZP_05042668.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195130|gb|EDX90089.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 385

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 131/358 (36%), Gaps = 26/358 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL           +    +   + A  L   +      + + +   A  + +  T   
Sbjct: 46  AMGLFGLSIPEELGGLGLTMEEEVMVAFELGRTSPAFRSLMGTNNGIGAQGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E             V     LTE   G+D  A+ ++ +K  D       
Sbjct: 106 KQKYVPQLATGE-------------VIGAFCLTEPDVGSDSGAVKTRAEKDGDHYILNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  + P +  F ++A+    + G   V   + DG   G+   +   K+G +   T ++
Sbjct: 153 KRFITNGPHAGLFTVMARTNPDIPGGGGVTAFIVDGDTPGIHRGKADVKMGQKGAHTCDI 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        +      G    MK+L    L  + + V      + +A++++  R   
Sbjct: 213 IFENCRVPAENIIGGQEGKGFKTAMKVLDRGRLHISAICVGVAYRLIEDAVNFSAERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +I+  +++  +AD   +  A  ++    A S D  +  S +       A   K +C 
Sbjct: 273 GKPIIEHQLIQAMLADSRAEAFAGRSMVLEAARSKDRGERVSLD-------ASCCKLFCS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +M   V   A++  GG+GY+ +  + R YR+     I  G+     + +   L +   
Sbjct: 326 EMVGRVADRAVQIHGGAGYMADYPVERFYRDVRLFRIYEGTTQIQQIVIARELARQAG 383


>gi|111023745|ref|YP_706717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823275|gb|ABG98559.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 133/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            +L   +   G         F    VR   +                     +   A  +
Sbjct: 40  RSLWVEAGKQGFLGMAVPEEFGGGGVRDFRYNAIITEETTRGGYSGIGFTLHNDVVAPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             ++     + W P   S E             +   + +TE   G+D+  I ++  +  
Sbjct: 100 LELSNEEQKQRWLPGFASGE-------------LITAIAMTEPGTGSDLQGIKTRAVRDG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + L+G K F+++ + +D  I++A  +   G      L+ +    G    R  +KIG 
Sbjct: 147 DD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGFSLLVVERDMPGFERGRNLDKIGM 205

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           ++  T EL F++        L     G +  MK L    L  A+++ + M  +L   I Y
Sbjct: 206 KAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNLPQERLSIAVVAAAAMESALDMTIQY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +      +  +A++A +  A   L  +     ++ K   +EAA A+    
Sbjct: 266 CRDRKAFGKSIGSFQNTRFVLAELATEATAVRVLVDKFIELLNDEKLSVQEAAMAKW--- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W  +    +I   ++  GG GY++E  IA+ Y +S   +I  G+   M   +   L
Sbjct: 323 ----WTTEAQVRLIDRCLQLHGGYGYMKEYPIAKAYMDSRVQTIYGGTTEIMKEIIGRGL 378


>gi|85703746|ref|ZP_01034850.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672674|gb|EAQ27531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 380

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 138/381 (36%), Gaps = 27/381 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    W++    P    L       G                +           MA 
Sbjct: 23  RIAPHAREWERAGTIP--KDLWPEIAALGFGGLYVSEDAGGSGLSRLDATLVFEALSMAC 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+    +  +     P+  + E               +   LTE 
Sbjct: 81  PSVAAFLSIHNMCAKMIDKFGSDEMKSRVLPRALTME-------------TVLSYCLTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA+ ++  + ++G Y L+G K F+S    SDA++++ +  G  G   +  +  +
Sbjct: 128 GSGSDAAALKTRADRTNEG-YTLNGTKAFISGGGYSDAYVVMVRT-GSDGPKGISTVYVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL Y  L++K+G RS  T +++F N       ++G+                L+ +
Sbjct: 186 AGTAGLSYGGLEDKMGWRSQPTRQVQFDNCNISSENMVGEEGKGFTYAMSGLDGGRLNIS 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  L + + Y   R   G  +     ++  +AD+ +D+ AA     + A   D
Sbjct: 246 ACSLGAAQQGLTQTLRYMAERKAFGKPIDQFQALQFRLADMEIDLQAARTFLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  +A  A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 N------DAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYGIEKLVRDLRVHE 359

Query: 442 ILLGSGNAMVLDVLNLLEKGT 462
           IL G+   M L V   +  G 
Sbjct: 360 ILEGTNEIMRLIVARQMLAGQ 380


>gi|171317157|ref|ZP_02906358.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171097650|gb|EDT42482.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 377

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDHDAHLPD--AVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    +     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 114 ---MAAGRIIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AMTDPEAGKRGISAFLVPTDTPGFIVGKPEKKLGIRASDTCAITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  + +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMATQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|307182564|gb|EFN69757.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 404

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 126/357 (35%), Gaps = 23/357 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L+    +GL        +            A   ++   L    +       A++V +  
Sbjct: 65  LKTLFENGLMGLEIPTDYGG----------AGCNFMSTILTVEEVAKVDGAIAALVDIHN 114

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T  +      K+ S E       P    + A    LTE   G+D  ++ +  +K      
Sbjct: 115 T--LVNSLIIKVAS-EDQKQTYLPKLAQNYAGSFCLTEPGAGSDAFSLKTVAKKDGSDYI 171

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +S ++  F++ A      G   +     D    GL   + ++K+G +++ T
Sbjct: 172 INGTKMWISNSDIAGVFLVFANANPSAGYRGITTFFVDRDTPGLSVAKPEDKLGIKASGT 231

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             + F N        LG+                +      +   +  L   I Y   R 
Sbjct: 232 CMIHFDNVRVPEKNILGEFGQGYKYAAGFLNEGRVGIGAQMIGIAQGCLDATIPYTLERK 291

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     M+  IA +A ++  A  L +  A   D  K   +EAA A+++A      
Sbjct: 292 QFGHDVFSFQSMQHQIAQVATELECARLLVYNAARLVDAKKDVMKEAAMAKLVA------ 345

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + A  V A+ ++ +GG G+  E    +++R+S   +I  G+ N  +  +   + K
Sbjct: 346 -SETALRVTAKCIDFMGGVGFTTEFPQEKYFRDSKIGTIYEGTSNMQLSTIAKCIRK 401


>gi|302754098|ref|XP_002960473.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii]
 gi|300171412|gb|EFJ38012.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii]
          Length = 429

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 140/387 (36%), Gaps = 35/387 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G +WD  ++ P    +LR++   G                +              +  
Sbjct: 65  PNGAQWDCDKYFPV--EVLRKAAGLGFGGMFCAEDVGGSRLNRVDGAVIFEALAYGDVST 122

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++      S++      +    W PK+   E+                  LTE   G
Sbjct: 123 TAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQMEFF-------------SSYCLTEPSSG 169

Query: 209 TDIAAIT--------SQGQK-ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
           +D A++         +  ++      Y L+G K F+S   +SD ++++A+  G +G   +
Sbjct: 170 SDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART-GALGPKGI 228

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL-- 315
              L +    GL + R ++K+G RS  T  +            L     G    M  L  
Sbjct: 229 SCFLLEKGMPGLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGREGQGFAIAMAGLDG 288

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  S  G +  L  A  YA  R   G  + +    +  +AD+   + A+  +   
Sbjct: 289 GRINIASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFKLADMQTALHASRLMVSN 348

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D    +      A   A + K +       +  +A++  GG GY+++  + R+ R
Sbjct: 349 AAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQLHGGYGYLKDYPVERYLR 402

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGT 462
           +   ++IL G+   M + +   + +  
Sbjct: 403 DLRVHTILEGTNEIMRVVLFRHMLQQP 429


>gi|291230666|ref|XP_002735282.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight
           chain-like [Saccoglossus kowalevskii]
          Length = 422

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 134/381 (35%), Gaps = 38/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK    P     L++    GL        +            A           
Sbjct: 60  PKAAEWDKAGEFP--KESLKKLWELGLLNPEIPEEYGGPGLNIVEACIAMEELSYGCTGF 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +   V L       K +  ++              +  +    G+TE  GG
Sbjct: 118 STTVLANTLAQMPVILAGNEEQKKKYLGRML-------------EEPLFCSYGVTEPGGG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLE 263
           +D+A I ++ +K  D         W  +S  ++ + +LA+      +   G F     + 
Sbjct: 165 SDVAGIRTRAEKKGDHYVINGQKMWITNSGYANWYFVLARTSTDPKQPASGAF--TGFIV 222

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
           D    GL   R +  +G RS+ T  + F +    ++   NV  G     KI +       
Sbjct: 223 DRDTPGLTPGRKEWNMGQRSSDTRGITFEDV---VVPKENVLLGEGAGFKIAMGAFDKTR 279

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  +V   R +L EA  Y+  R   G ++ +   +   +A++A+ I ++ ++ +R A
Sbjct: 280 PPVAAGAVGLARRALDEATKYSLERRTMGKLIAEHQAVAFMLAEMAIGIESSRSMVYRAA 339

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              DE +  +         A I K     +A     +A++  GG G+  +  + +  R++
Sbjct: 340 LQTDEGERNT-------YYASIAKALAADVANKCATDAVQIFGGYGFNSDYPVEKLMRDA 392

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+     + +   L
Sbjct: 393 KIFQIYEGTAQIQRMIISRQL 413


>gi|262278711|ref|ZP_06056496.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259062|gb|EEY77795.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 390

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 137/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPKAGAKGMTAFLVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L       + +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGTKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYSAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|209546458|ref|YP_002278376.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537702|gb|ACI57636.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 381

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 144/402 (35%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LG+       +  AR A  +   L          D+    P    L  R    GLH    
Sbjct: 6   LGDTA-DAIRETTARFAADHIAPL------AAEIDESNMFP--RQLWPRMGALGLHGITV 56

Query: 121 DRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + +    +P       PK+ 
Sbjct: 57  EEEFGGAGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWASPEQKHRHLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E+                L ++E   G+D+ ++  + ++  D         W  ++P 
Sbjct: 117 AGEH-------------VGSLAMSEAGAGSDVVSMRLRAERKGDRYILNGTKFWITNAPH 163

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 164 ADVLVVYAKTDPAAGPKGISAFIIEKGLPGFSVSKKLSKLGMRGSDTAELVFQDCQVPAE 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +      V+ +   +  + A+++   +  M+  +   + Y R R   G  + D  +M+
Sbjct: 224 ALMGREGEGVKILMSGLDYERAVLAGGPLGIMQACMDVVLPYVRDRKQFGKPIGDFQLMQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+ + + +A A  + +A + D  ++        R  A     +  + A  V  EA+
Sbjct: 284 AKIADMYVALNSARAYVYSVARACDAGRAT-------RTDAAAAILFASENAVKVSLEAI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY  E  + R  R++    I  G+       +   L
Sbjct: 337 QALGGAGYTREWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 378


>gi|226946952|ref|YP_002802025.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226721879|gb|ACO81050.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 393

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 68/407 (16%), Positives = 145/407 (35%), Gaps = 35/407 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +E+++L + V    A+E+A              P     D+ +  P    L R+    GL
Sbjct: 13  EEIDMLRDSVAGFAAREIA--------------PRAAEADRSDRFPM--DLWRKFGEMGL 56

Query: 116 HCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                   +        AH I    +   +        + S    + +    TP   + +
Sbjct: 57  LGLTVAEEYGGAGMGYLAHMIAMEEISRASGGIGLSYGAHSNLCVNQIHRNGTPAQKERF 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E+                L ++E   G+D+ ++  +  +  D         W 
Sbjct: 117 LPKLISGEH-------------VGALAMSEPNAGSDVVSMQLRADRKGDRYVLNGTKMWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            + P  D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F + 
Sbjct: 164 TNGPDCDVLVVYAKTDPAAGARGISAFVLEKDTPGFSVAQKLDKLGMRGSHTGELVFRDV 223

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILID 351
                  L      V  +   +  + A+++   +  M+ ++   + Y   R   G  + +
Sbjct: 224 EIPAENLLGREGEGVRVLMSGLDYERAVLAGGPLGLMQAAMDVVVPYIHERRQFGQAIGE 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+   + A  A  + +    D   +        R        +C + A  +
Sbjct: 284 FQLIQAKVADMYTTLQACRAYLYAVGRQLDALGAGHVRQ--VRKDCAGVILYCAEKATWL 341

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 342 AGEAIQILGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|312217731|emb|CBX97678.1| hypothetical protein [Leptosphaeria maculans]
          Length = 535

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 141/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E      A++ +    GL       ++          I A           
Sbjct: 178 PKAREMDEAETMD--PAVVEQLFEQGLMGIEIPETYGGSGMNFTSAIIAIEELARVDPSV 235

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L     T   + +    + R+ K+W PK+               T+      L+E   
Sbjct: 236 SVLCDVHNTLVNTAIIKYGSERIKKEWLPKL--------------ATNTVGSFCLSEPVS 281

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++  +  +G        W  +S  +  FI+ A ++       +   + +   
Sbjct: 282 GSDAFALATKATRTDNGYKINGSKMWITNSMEAGFFIVFANLDPSKKYKGITAFIVEKGT 341

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    + + K+G ++++T  + F +     +   N+     E  K  I  L+   + ++
Sbjct: 342 KGFSIAKKEKKLGIKASSTCVINFDDV---EIPKENLLGNEYEGYKYAIALLNEGRIGIA 398

Query: 327 GMRVSLAEAIH-----YA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                LA         YA   R   G ++ +   M+  +A    +I AA AL +  A   
Sbjct: 399 AQMTGLALGAWENAAGYAWNDRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAARKK 458

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +    +AA A       K +  ++A  V + A+E +GG G++ E    +++R+S   
Sbjct: 459 EAGEDFVMDAAMA-------KLYSSQVAGRVSSSAVEWMGGMGFVREGLAEKYFRDSKIG 511

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+ N  +  +  LL+K
Sbjct: 512 AIYEGTSNIQLTTIAKLLQK 531


>gi|320166428|gb|EFW43327.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 149/395 (37%), Gaps = 45/395 (11%)

Query: 74  ARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           AR A +   P++      G + D          +L+     GL        +       +
Sbjct: 55  ARFAEDKIRPRVRQMDAVG-KIDA--------DILKGLHEQGLMGVEIPAEYGGTN--AS 103

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKA 189
                  +  +A+++ G  +   V +  +   +    T      + P++           
Sbjct: 104 FMSACLVIEELAKVDPGISVIVDVQNTLIDKLIMHHGTTAQKDKYLPRL----------- 152

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
               T +     L+E   G+D  A+ ++ +K  D         W  ++  +  F+++A  
Sbjct: 153 ---ATDMVGSFCLSEAGSGSDAFALQTKAEKKGDDYILNGTKMWITNAAEAGVFLVMANA 209

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + D    GL   + ++K+G R+++T  +  ++         N+     
Sbjct: 210 DFSKGYKGITCFIVDRDTPGLEIGKKEDKLGIRASSTCSVNLTDVRVPAS---NILGKFG 266

Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIA 363
           +  K  I  L+   + +    + LA+ +      Y  +R   G I+ +   M+  IA +A
Sbjct: 267 QGYKYAISMLNEGRIGIGAQMLGLAQGVFDVTMPYLHQRKQFGTIIAEFQGMQHQIAQVA 326

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L +  A   +  +  ++EAA A       K +  ++A    ++ +E +GG G
Sbjct: 327 TEITAARLLVYNAARLQEAGRPVAQEAAMA-------KLYASQVAETSASKCIEWLGGVG 379

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + ++    ++YR+     I  G+ N  +  +   +
Sbjct: 380 FTKDFPAEKYYRDVKIGKIYEGTSNIQLSTIAKSI 414


>gi|289741273|gb|ADD19384.1| medium-chain acyl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 420

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 68/408 (16%), Positives = 137/408 (33%), Gaps = 45/408 (11%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             QE+AR  +     P    +   GE  WD V          +++   GL  +   + F 
Sbjct: 43  QMQEMARKFSREEVLPVAAHHDKTGEYPWDIV----------KKAWALGLMNNHIPQEFG 92

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +          A     A       +  S    + + L       K +  ++       
Sbjct: 93  GLGLDVYTTCLIAEELAYACTGIMTALEASSLGQTPIILSANKEQKKKYLGRLL------ 146

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+A I ++ +K  D         W  +  +++ + +
Sbjct: 147 -------EEPLVAAYCVTEPVAGSDVAGIRTRAEKKGDEYIINGQKMWITNGGVANWYFV 199

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+                + +    GL   R +  +G R++ T  + F +         
Sbjct: 200 LARTHPDPKAPASKAFTGFIVERETPGLTPGRKEINMGQRASDTRGITFEDVRVP---KE 256

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G     KI +          A  +V   +  + EA+ Y+  R   G  +     ++
Sbjct: 257 NVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCMDEALKYSLDRKTFGVPIAYHQAVQ 316

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  +       A   D+ +  S         A I K     MA  V ++A+
Sbjct: 317 FMLADMAVGVETSRLAYRLAAWEIDQGRRNS-------YYASIAKCHAADMANKVASDAV 369

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           +  GG+G+  +  + +  R++    I  G+     L +   + +    
Sbjct: 370 QIFGGNGFNSDYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMFEAAKA 417


>gi|260433872|ref|ZP_05787843.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417700|gb|EEX10959.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 380

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 135/378 (35%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+     P    L  +    G                +           MA
Sbjct: 22  EQIAPFARQWEAEGTIP--KDLWPKVGELGFGGLYVSEESGGSGLTRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P + S              +  +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAKMLDSFASDELKSRIMPDVLS-------------LNTVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++ ++ +DG Y L+G K F+S    SDA++ + +  G  G   +  +  
Sbjct: 127 PGSGSDAAALKTRAERTNDG-YTLNGTKAFISGGGYSDAYVCMVRT-GGDGPKGISTVYV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
           +    GL +  L+ K+G +S  T +++F +        +     G    M  L    L+ 
Sbjct: 185 EDGTPGLSFGALEQKMGWKSQPTAQVQFDDCKIPAENLVGTEGDGFKYAMMGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   +  L   + Y   R   G  +     ++  +AD+ +++ AA     + A   
Sbjct: 245 ASCSLGAAQAGLDMTLQYMSERKAFGQTIDQFQALQFRLADMEIELQAARTFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+          A     + K +  +    V+ + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DQGAPD------ATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   L
Sbjct: 359 QILEGTNEIMRVIVARQL 376


>gi|255319846|ref|ZP_05361051.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262380377|ref|ZP_06073531.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255303165|gb|EET82377.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262297823|gb|EEY85738.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 607

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 91/500 (18%), Positives = 181/500 (36%), Gaps = 66/500 (13%)

Query: 62  GEYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDG 114
           GE   S T   +   A     N  +P        G  W+  +V     +     + +  G
Sbjct: 31  GELADSDTVDMILEGAADYCENVISPLYQTGDDEGCHWNNGEVTTPKGYKEAYDQFVQSG 90

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHK 172
                +   +          +   +  +M        M P ++   M  +    T     
Sbjct: 91  WQGLSYPEQYGGQGLP--MSLNLIKSEMMGTANWAFTMYPGLSMGCMNTILQFGTEEQKD 148

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P + +  +  T             + LTE + GTD+  + ++ +  +D  Y ++G K
Sbjct: 149 IYMPPLVAGTWSGT-------------MCLTEPQCGTDLGQLKTKAEPQADSTYKITGTK 195

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       I+LA++         +  F+VP+ L       G  N +    ++
Sbjct: 196 IFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIVPKFLPTAEGSVGERNAVNCGSIE 255

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  L F N  G+L+G+ N     +        + +A+  ++   +S   A+
Sbjct: 256 HKMGIKASATAVLNFDNATGYLIGEQNKGLHAMFTFMNTARIGTAVQGIAHAELSFQGAL 315

Query: 337 HYARRRH----VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA+ R     +SG          +I    ++R +           A+ +  A   D   
Sbjct: 316 PYAKERMSMRALSGKKDPEKVADAIIHHADVRRMLLTQKAIAEGGRAMIYHAAQLADKMT 375

Query: 382 EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A +R + A Y           PI K +  ++        M+  GG GYI+E  + +  R
Sbjct: 376 DALARGDNAEYEEYDDKLGFYTPILKGFLTELGLEAANHGMQVFGGHGYIKEWGMEQIVR 435

Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           ++   ++  G+     LD++    LL     +     + + +  G   +     +R    
Sbjct: 436 DARIATLYEGTTGVQALDLIGRKVLLSSKGKVVRDYTAEILKFSGRHARN--KYMRRFAW 493

Query: 493 LCKEDKGLARFLTEKIALAS 512
              +       LT +I LA+
Sbjct: 494 DLTKICAQWNALTVRIMLAA 513


>gi|269837232|ref|YP_003319460.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786495|gb|ACZ38638.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 383

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 82/377 (21%), Positives = 142/377 (37%), Gaps = 29/377 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQL 146
            P     D+    PA    LR +   GL   +    F    V      +    +   +  
Sbjct: 25  TPRAADRDREAAFPA--DELRAAATLGLCGLMVPEEFGGNPVGSLGAALVYEEVAAGSPA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  L   +      VA    P +  +  P++ S E             +     LTE  
Sbjct: 83  LSVTLSVHNTLVCGAVATYGQPELQAELLPRLASGE-------------ILGAYALTEPS 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRV-GCFLVPRLLED 264
            G+D AA+T++ ++  D  Y L G K F++       +I+ A  +        +     D
Sbjct: 130 AGSDAAALTTRARRDGDH-YVLDGRKIFVTHGDHAGLYIIFAVTDPEARTSRRISAFAVD 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL   R ++K+G R++   E+  +        LLG+     G    +     +   
Sbjct: 189 RDTPGLAVPRREHKLGLRASEIAEVTLTECRVPATRLLGNEGDGFGIAMALLDGGRIGIG 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   R +   A  YAR R   G  + D   ++  +AD+A  I AA  L +R A   D
Sbjct: 249 AQAVGIARGAFDLARRYARERQQFGRPIADFQAIQWKLADMATRIDAARLLVWRAATLRD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  +         A   K +  + A  V  +A++  GG GY+EE ++ R++R++ A  
Sbjct: 309 QGQPHTLA-------ASQAKLFASETATFVTDQAVQIHGGYGYLEEYAVERYFRDARATV 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 362 IYEGTSEIQRLVIARRL 378


>gi|299533791|ref|ZP_07047162.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718207|gb|EFI59193.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 386

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 135/365 (36%), Gaps = 26/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++     GL        F  +      ++R    L   A      + +     +  + +
Sbjct: 40  IVQEMRDLGLFGLTIPERFGGLELTMEEEVRVLLELCQTAPAFRSVIGTTVGIGSQGILM 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W P++ + E             V     LTE   G+D A++ +   K  D 
Sbjct: 100 DGTPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++P +  F ++A+      G   V   + D    G+ + +   K+G R 
Sbjct: 147 YIVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIVDARSAGISFGKYDRKMGQRG 206

Query: 284 NATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N          L    G    MK+L    +  A ++V   +  L +A+ YA
Sbjct: 207 AHTCDVIFDNVKVPAANLIGLQEGKGFKTAMKVLEKGRIHIAAVAVGCAKRILHDALQYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + D  +++  +AD   ++ AA  ++   A   D+  + S E       A  
Sbjct: 267 LERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGSNVSTE-------ASC 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +M   V   A++ +GGSGY+ E  I R YR+     +  G+     + +   + 
Sbjct: 320 AKMFATEMCGRVADRAVQILGGSGYMSEYGIERFYRDVRLFRLYEGTTQIQQIIIARNMV 379

Query: 460 KGTNL 464
           +    
Sbjct: 380 REARA 384


>gi|239817685|ref|YP_002946595.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804262|gb|ACS21329.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 390

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 138/377 (36%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P  H L ++    GLH       F    +   AH +    +   +   
Sbjct: 31  PRAADIDRDNLFP--HDLWQKLGELGLHGMTVKEEFGGTELGYLAHIVAMEEVSRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    K + P++ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIHRNGSDAQKKKYLPRLVSGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +       G  W  +   +D  ++ A+ E  +G   +   + +   
Sbjct: 136 GSDVVSMKLKAEKKNGYYVLNGGKMWITNGGDADTLVIYAKTEPEMGARGMTAFIVEKGF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G       +K+G R + T  L F N       + NV  G     K+L+  LD     +S
Sbjct: 196 KGFSAGTKLDKLGMRGSNTYPLFFDNCEVP---EENVLGGEGMGAKVLMSGLDYERAVLS 252

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M   +   + +   R   G  + +  +M+  +AD+     A  A  + +  + D
Sbjct: 253 GGPLGIMAACMDAVLPFIHERKQFGQSIGEFQLMQGKLADMYSTWQATRAYVYAVGKACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R++ A   R  A     +  + A  +  EA++ +GG GY ++  + R +R++    
Sbjct: 313 ----RNDHARTFRKDAAGAILYSAEKATWMAGEAIQALGGVGYTKDFPVERLWRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|195441202|ref|XP_002068406.1| GK20439 [Drosophila willistoni]
 gi|194164491|gb|EDW79392.1| GK20439 [Drosophila willistoni]
          Length = 417

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 114/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 136 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGTKMWISNSD 195

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T  L F N     
Sbjct: 196 VAGVFLVFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCMLTFDNVRVP- 254

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + +    V LA+      I Y   R   G  + + 
Sbjct: 255 --EENILGTFGHGYKYAAGFLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGEAIYNF 312

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA IA +I AA  L++  A   ++     +EAA A       K++  ++A    
Sbjct: 313 QSMQHQIATIATEIEAARLLTYNAARLQEQGAPFLKEAAMA-------KFYASEVAQRAA 365

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR++   +I  G+ N  +  +   ++K
Sbjct: 366 IKCIDWMGGVGFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 413


>gi|330823264|ref|YP_004386567.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308636|gb|AEB83051.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 598

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 89/483 (18%), Positives = 173/483 (35%), Gaps = 69/483 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KVEFHPAWHALLRRSIHDGLHC 117
              ++   +E  + A   T  L+      G   D    +V     +     + +  G   
Sbjct: 36  ADTINAVLEEAGKFAAEVTFPLNVSGDTEGCTLDQQTHEVTTPKGFKEAYAKYVEGGWAA 95

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
              D  +        H +      ++        M P ++  +  AL    T    K + 
Sbjct: 96  LSCDPEYGGQGLP--HVVNQCLYEMLNSANQAWTMYPGLSHGAYEALLAHGTDAQKKTYL 153

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +  +DG Y ++G+K F+
Sbjct: 154 PKLVSGEWTGT-------------MCLTEPHCGTDLGLLRTKAEPQADGTYRITGNKIFI 200

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++         +  F+VP+   +     G+ N +    L++K+
Sbjct: 201 SAGEHDVAANIVHLVLARLPDAPKGSKGISLFVVPKFHVNADGSLGARNPIYCTGLEHKM 260

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT ++      G ++G+ N     +  M     L     S+    V+   A+ YA
Sbjct: 261 GIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMMNAARLGVGNQSLGLTEVAFQNALAYA 320

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P +++ +         A AL        D+A    
Sbjct: 321 KDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAEGARALQIYCTLLLDKAHHHP 380

Query: 388 EE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +E           ++ PI K +            M+  GG G+I+E  + +  R++  N 
Sbjct: 381 DEKERKGCDELVALLTPIVKAFITDNGHIATNACMQVFGGHGFIKEWGMEQFVRDNRINM 440

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD+L     G               G++ KK+  ++   ++    ++ +A
Sbjct: 441 IYEGTNTVQSLDLLGRKVLGNQ-------------GATLKKLGKLIGQLVAEEGVNEKMA 487

Query: 502 RFL 504
            F+
Sbjct: 488 EFI 490


>gi|318059984|ref|ZP_07978707.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318079733|ref|ZP_07987065.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 383

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 139/400 (34%), Gaps = 28/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  LS   +   R+A     +     P    WD+ E       ++ +    G      D 
Sbjct: 2   DLRLSEEQEAARRLARDFVEREVV--PYAREWDRAE--DVDRGIVAKLGEVGFLGLTIDE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSR 181
            +                   A      ++S S+   A  +A        + W P + S 
Sbjct: 58  EYGGSGGDHLTYCLVTEELGRADSSVRGIVSVSLGLVAKTLAAWGDAEQKRRWLPGLTSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            Y                  LTE   G+D  A+T++  +  D      G  +  +   +D
Sbjct: 118 RY-------------VGCFALTEPGTGSDAGALTTRAVRDGDDWLLTGGKMFITNGTWAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+     G   V   L      G   + L  K+G R  AT EL           L
Sbjct: 165 LALVFARSNDAPGHKGVSAFLVPTGTPGFERRTLHGKLGLRGQATAELVLDGVRVPGSAL 224

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 +  A   V   + +L  A+ +A+ R   G  +    +++  
Sbjct: 225 LGPEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQEL 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +ADIALD+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++ 
Sbjct: 285 LADIALDVDAARLLTWRVADLVDRGEPFTGAASRA-------KLFASEAAVRAANNALQV 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 338 HGGYGYIDEYPVGKLLRDARVMTLYEGTSQIQKLLIGREL 377


>gi|229060001|ref|ZP_04197373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
 gi|229167168|ref|ZP_04294909.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228616206|gb|EEK73290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621]
 gi|228719318|gb|EEL70924.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603]
          Length = 569

 Score =  267 bits (682), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEQHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENILGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEDAEVEIDVANVERNHRYILLSKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|254487654|ref|ZP_05100859.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044523|gb|EEB85161.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 387

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 143/402 (35%), Gaps = 33/402 (8%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +L    N     +H +      P     D+  EF P    L +     GL     D  + 
Sbjct: 9   DLGDDVNDLRDMVHRWSQERVKPMAAGIDQKNEFPP---ELWKEMGDLGLLGMTVDEEYG 65

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH +    +   +   +    + S    + ++L  TP     + P + S    
Sbjct: 66  GTGMGYVAHTVAVEEIARASASVSLSYGAHSNLCVNQISLNGTPEQKAKFLPGLCSG--- 122

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                     +    L ++E   G+D+ ++  + +K +D         W  + P +D  +
Sbjct: 123 ----------AHVGALAMSEPSAGSDVVSMKLRAEKRNDHYRLSGNKYWITNGPDADTLV 172

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG+
Sbjct: 173 VYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGE 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +        +  A + +  M   L E + Y   R   G  +    +M+  +AD
Sbjct: 233 EGRGVRVLMSGLDYERVVLAGIGLGIMAACLDEIMPYMAERKQFGQPIGSFQLMQGKMAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + +A A  + +A + D  +    +AA           +  + A     +A++ +GG
Sbjct: 293 MYTAMNSARAYVYEVAKACDRGEVTRADAA-------ACCLYASEEAMKQAHQAVQAMGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GY+ +  + R +R++    I  G+     + V   +     
Sbjct: 346 AGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLVGREMMGAMA 387


>gi|134298228|ref|YP_001111724.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum
           reducens MI-1]
 gi|134050928|gb|ABO48899.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 586

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 80/389 (20%), Positives = 141/389 (36%), Gaps = 33/389 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +LL ++   GL  +     +E     +                +    + +   +  + 
Sbjct: 60  RSLLAKAGELGLLSADVPEEYEGGEMGKISSAIITENISAGGSFSVSFSAHTGIGSLPIV 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + P + +                     LTE   G+D  A  ++     D
Sbjct: 120 LFGTEEQKKRYLPDLATG-------------RKIAAYALTEPMAGSDALAAKTKAVLTED 166

Query: 224 G-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++   +D F++ A+++G          + D    G      + K+G 
Sbjct: 167 GKYYVLNGEKIFITNASFADVFVVYAKIDGEK----FTAFIVDRDTPGFSIGPEEKKLGI 222

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           + ++T  L F +    +   L  +  G V    IL        + SV   + +++ A  Y
Sbjct: 223 KGSSTCSLIFEDAKVPVENLLGEIGKGHVIAFNILNIGRYKLGLGSVGLSKSAISYATKY 282

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARI 395
           A  R   G  +    +++  +A +A    A+ +L +RL  + +E    K    E   A  
Sbjct: 283 ALERQQFGIPIAKFGMIQNKLAQMAAKTYASESLIYRLVGNIEEALHGKVDGREIGAAIE 342

Query: 396 M----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  I+K  C +    V  EA++  GG GY +E    R YR++  N I  G+     
Sbjct: 343 EYAVECSISKVHCSESLAYVTDEAVQIYGGYGYTQEFPAERMYRDARINRIFEGTNEVNR 402

Query: 452 LDV----LNLLEKGTNLFEQLFSTLEQDL 476
           L +    L L  KG     Q    L   L
Sbjct: 403 LIIPATLLRLGMKGQLPLLQAAQDLAGQL 431


>gi|260434191|ref|ZP_05788162.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260418019|gb|EEX11278.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 387

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 140/398 (35%), Gaps = 31/398 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     DK    P  + L +     GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQERVKPMAAEIDKTNAFP--NELWKEMGDLGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L  +    + + P + S E   
Sbjct: 67  AGMSYLAHVVAVEEIARASASVSLSYGAHSNLCVNQIKLNGSEAQKRKYLPGLISGEN-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L +   NG       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPEAGSKGITAFLIEKEMNGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GKGVAVLMSGLDYERVVLAGIGTGIMAACLDEIMPYLAERKQFGKPIGTFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYIYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G++ +  ++R +R++    I  G+     + +   L  
Sbjct: 347 GFLADAPVSRLFRDAKLMEIGAGTSEIRRMLIGRELMN 384


>gi|83953923|ref|ZP_00962644.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83841868|gb|EAP81037.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 387

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 142/402 (35%), Gaps = 33/402 (8%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +L    N     +H +      P     D   EF PA   L       GL     +  F 
Sbjct: 9   DLGDDVNEMRDMVHRWAQERVKPMAAEIDTHNEFPPA---LWEEMGSLGLLGMTVEEEFG 65

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH +    +   +   +    + S    + + L  +P     + P + S ++ 
Sbjct: 66  GSGMGYVAHTVAVEEIARASASVSLSYGAHSNLCVNQIRLNGSPEQKAKFLPGLCSGQH- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++  + +K +D         W  + P +D  +
Sbjct: 125 ------------VGALAMSEPSAGSDVVSMKLRAEKRNDHYRLSGNKYWITNGPDADTLV 172

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG+
Sbjct: 173 VYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGE 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +        +  A + +  M   L E + Y   R   G  + +  +M+  +AD
Sbjct: 233 EGRGVAVLMSGLDYERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIGNFQLMQGKMAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + +A A  + +A + D       +AA           +  + A     +A++ +GG
Sbjct: 293 MYTAMNSARAYVYEVAKACDRGDVTRADAA-------ACCLYASEEAMKQAHQAVQAMGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GY+ +  + R +R++    I  G+     + V   +     
Sbjct: 346 AGYLSDNPVGRIFRDAKLMEIGAGTSEIRRMLVGREMMGAMA 387


>gi|226366182|ref|YP_002783965.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244672|dbj|BAH55020.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 133/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            +L   +   G         F    VR   +                     +   A  +
Sbjct: 46  RSLWVEAGKQGFLGMAVPEEFGGGGVRDFRYNAIITEETTRGGYSGIGFTLHNDVVAPYL 105

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             ++     + W P   S E             +   + +TE   G+D+  I ++  +  
Sbjct: 106 LELSNDEQKQRWLPGFASGE-------------LITAIAMTEPGTGSDLQGIKTRAVRDG 152

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + L+G K F+++ + +D  I++A  +   G      L+ +    G    R  +KIG 
Sbjct: 153 DD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGFSLLVVERDMPGFERGRNLDKIGM 211

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           ++  T EL F++        L     G +  MK L    L  A+++ + M  +L   I Y
Sbjct: 212 KAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNLPQERLSIAVVAAAAMESALDMTIQY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +      +  +A++A +  A   L  +     ++ K   +EAA A+    
Sbjct: 272 CRDRKAFGKSIGSFQNTRFVLAELATEATAVRVLVDKFIELLNDEKLSVQEAAMAKW--- 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W  +    +I   ++  GG GY++E  IA+ Y +S   +I  G+   M   +   L
Sbjct: 329 ----WTTEAQVRLIDRCLQLHGGYGYMKEYPIAKAYMDSRVQTIYGGTTEIMKEIIGRGL 384


>gi|41055941|ref|NP_957449.1| isobutyryl-CoA dehydrogenase, mitochondrial [Danio rerio]
 gi|28422318|gb|AAH44203.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Danio rerio]
          Length = 418

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G      +         +              +  
Sbjct: 64  PHMAEWDQKEIFPV--EAMRKAAELGFGGIYVNPDVGGSGLSRLDTSIIFEALSTGCVST 121

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+         + + P + S                     LTE   G
Sbjct: 122 TAYVSIHNMCAWMIDTFGNNEQRERFCPDLCSM-------------QKFASYCLTEPGSG 168

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +      D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +   
Sbjct: 169 SDAASLLTSATLKGDH-YILNGSKAFISGGGDTDVYVVMCRT-GGKGPKGISCLVVEKGT 226

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   L     G    MK      ++ A  S
Sbjct: 227 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVTNRLGTEGQGFSIAMKGLNGGRINIASCS 286

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L +   ++  +A++A  + A+  L  + A +  + +
Sbjct: 287 LGAAHASVLLARDHMCVRKQFGETLANSQFLQFKLAEMATKLVASRLLVRQAALALQDGR 346

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  +  + K +      ++  +A++  GG GY+++ ++ ++ R+   + IL 
Sbjct: 347 PD------AVSLCSMAKLFVTDECFSICNQALQIHGGYGYLKDYAVQQYVRDIRVHQILE 400

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 401 GTNEVMRMIIARSL 414


>gi|330505038|ref|YP_004381907.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919324|gb|AEB60155.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 590

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 92/540 (17%), Positives = 180/540 (33%), Gaps = 63/540 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERW--DKVEFHPAW 103
              +   L  L E V + TA  +   A   T     P   +    G +W    V     +
Sbjct: 21  APSLWARLPALAETVDADTADAILEEAAKVTGSLIAPLNRSGDEEGAQWVDGDVRTPTGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G      + ++  +   +   +    +   A        + S  +   + 
Sbjct: 81  REAYATYTEGGWVGLSGNPNYGGMGMPKMLAVAFEEMLYAAGSSFALYSALSSGACLAID 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + P             PM +   A  + LTE   GTD+  I ++ +  +D
Sbjct: 141 AHASEELKTTYLP-------------PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQAD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G Y ++G K F++    D       ++LA++         +  FLVP+++ +     G+ 
Sbjct: 188 GSYKVTGSKIFITGGEQDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNADGSLGAR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G++N     +  M     L   I  +  
Sbjct: 248 NAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGC 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
              S   A+ YAR R  S               +I    ++R +  +        A +  
Sbjct: 308 AEASYQSAVSYARERIQSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACY 367

Query: 376 LANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +    D AK       R    A   ++ P+ K +             +  GG GYI E  
Sbjct: 368 VGQQLDLAKYAEDASERQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD+L   ++  G        S +     +        L
Sbjct: 428 QEQLVRDVRIAQIYEGTNGIQALDLLGRKVVANGGAALRLFASEVRDFAHAHESPSSDRL 487

Query: 488 RDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
              +   +  + ++ +L E+         +A+  Y      +A  ++  R      S   
Sbjct: 488 ---VEALERLEAVSGWLLEQAKSEPNAVGAASVEYLHLFGYVAYAYMWARMAAVAQSKLG 544


>gi|195064828|ref|XP_001996645.1| GH22516 [Drosophila grimshawi]
 gi|193895423|gb|EDV94289.1| GH22516 [Drosophila grimshawi]
          Length = 424

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 136/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK++         R+    G      +  +         H I    +   A   
Sbjct: 64  PHAKEIDKLDSFKNLRPFWRKLGELGFLGITAEPEYGGTGGTYLDHCIIMEEISRAAGGV 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 124 ALSYGANSNLCINQITKNGTHEQKEKYLPKLCSGEHMG-------------ALAMSEPGA 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDG 265
           G+D+ ++  + ++  D         W  +   ++  ++ A+    G      +   + + 
Sbjct: 171 GSDVVSMKLRAERKGDYYVLNGSKFWITNGSDAETMVVYAKTGASGVPDRHAITAFIVET 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R ++T E+ F +       +LG  N     +        L  A 
Sbjct: 231 GWEGFSVAQKLDKLGMRGSSTCEIVFQDLKVPAKNILGKENRGVYVLMSGLDFERLVLAA 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   A  YA +R   G ++ +  +++  +AD+  +++A  +  + +A S D 
Sbjct: 291 GPVGLMQAACDVAFDYAHQRKQMGKLIGEFQLIQGKMADMYTNLSACRSYLYAVARSCDA 350

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++             +C + A  +  +A++ +GG+GYI E    R  R++    I
Sbjct: 351 GVKSSKD-------CAGVILYCAEKATQLALDAIQILGGNGYINENPTGRILRDAKLYEI 403

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 404 GAGTSEIRRWLIGRQLNQ 421


>gi|169632378|ref|YP_001706114.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151170|emb|CAO99842.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii]
          Length = 390

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGALGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ + +  G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIIVEANRAGFTKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R        K   E AA A     
Sbjct: 278 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLNEKLSVEAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 333 --KYKISDMFSKVVDECLQLHGGYGYMIEYPIARAYIDHRANRIYAGTNEIMKELISRTL 390


>gi|163842694|ref|YP_001627098.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis
           ATCC 23445]
 gi|163673417|gb|ABY37528.1| acyl-CoA dehydrogenase domain protein [Brucella suis ATCC 23445]
          Length = 592

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|91088951|ref|XP_973830.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (SCAD) (Butyryl-CoA
           dehydrogenase) [Tribolium castaneum]
 gi|270011559|gb|EFA08007.1| hypothetical protein TcasGA2_TC005596 [Tribolium castaneum]
          Length = 405

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 143/375 (38%), Gaps = 24/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P     +++    GL      + +    +          L L   +E 
Sbjct: 48  PIAAQLDREHKFPE--KQIKQLGKLGLLAVSVSKEYGGSGQD--------NLALAVAVEE 97

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +   +       ++ +   ++ +         P           L+E   G
Sbjct: 98  IARGCGGTGAIVSIHNC----LYSNLLNRLGTARQKERFLRPFITDCELGCFALSEPDAG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+ A+++      D         W  S P+  A I+ A V+ ++    +   +     +
Sbjct: 154 SDVGAMSTTAVADGDCFVLNGTKSWVTSGPVGKAAIVFATVDKQLRHKGITAFIVPLPSD 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+   + ++K+G R++ T  L   N        +  V  G V  M  L    +  A  ++
Sbjct: 214 GVTLGKKEDKLGIRASPTCNLIMDNVRVPKSNVIGDVGDGFVIAMAQLDFARVGIAAQAL 273

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+HYA +R   G  +     +K  +AD+A+ + +A  L +R A   DE + 
Sbjct: 274 GIAQAALELAVHYASQRKSFGQTINQFQAVKLRLADMAIKLESARLLVWRAAVLCDEPQR 333

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++E++ A++ A        + A  +   A++ +GG GYI +    RHYR++    I  G
Sbjct: 334 STKESSMAKLAA-------SEAATFITHGAIQILGGMGYISDMPAERHYRDARITEIYGG 386

Query: 446 SGNAMVLDVLNLLEK 460
             +   L + + + +
Sbjct: 387 VNDIQRLLIGDTIIR 401


>gi|114563892|ref|YP_751406.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
 gi|114335185|gb|ABI72567.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400]
          Length = 389

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 141/402 (35%), Gaps = 33/402 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V           AN   P            D  EF    + L       GL     
Sbjct: 12  LGEDVDMLRDAVRGFAANEIAPMAAQVD-----IDN-EFP---NQLWPVLGEMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           D  +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  DEQYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNDAQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 AHTYVIYAKTDLEKGAHGITAFIVERGSKGFSQAQKLDKLGMRGSNTCELVFEDCEVPEE 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L      V+ +   +  +  ++S   +  M   +   + Y   R   G  +    +++
Sbjct: 230 NILGGLNNGVKVLMSGLDYERVVLSGGPLGIMSACMDIVVPYIHEREQFGKSIGQFQLVQ 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +  +A+
Sbjct: 290 GKLADMYTGMNAARAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKMALDAI 342

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 343 QLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|330502981|ref|YP_004379850.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917267|gb|AEB58098.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 382

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 147/372 (39%), Gaps = 28/372 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++ E  P    L  ++   G+    +   F            AA   LM     G +
Sbjct: 32  DEWEEAEEFP--RELYLKAGAAGILGIGYPEQFGGSHEGDVFAKVAASEELMLSGSGGLV 89

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                    +  +     P V +   P++ + E               + L +TE  GG+
Sbjct: 90  AGLGSLDIGLPPIVKWAKPTVRERVVPQVLAGE-------------KIMALAVTEPSGGS 136

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A + ++  +  +  Y ++G K F++S +   +  +A   G  G   V  LL +    G
Sbjct: 137 DVANLKTRAVRDGEH-YRINGSKTFITSGVRADYYTVAVRTGGEGFGGVSLLLVEKGTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R   K+G  ++ T EL F +       L+G  N     +        L  AIM+  
Sbjct: 196 FSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMANFQSERLSLAIMANM 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +++L E++ +AR R   G  +    V+K  +A++A  +  +   ++R A      +S 
Sbjct: 256 TAQLALEESMKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREFTYRQAAQMAAGRSV 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   SI  G+
Sbjct: 316 IKE-------ISMAKNFATDIADRLTYDAVQIMGGMGYMRESLVERLYRDNRILSIGGGT 368

Query: 447 GNAMVLDVLNLL 458
              M   +   +
Sbjct: 369 REIMNEIIAKQM 380


>gi|226953996|ref|ZP_03824460.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835247|gb|EEH67630.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 393

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 141/382 (36%), Gaps = 29/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 34  PIAQQVDQDNKFPAH--LWKKFGDMGLLGLTVSEEYGGTNLGYLAHIIAMQEISRASAAI 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 92  ALSYGAHSNLCINQINRNGNAQQKQKYLPKLISGEY-------------VGALAMSEPNA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 139 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKDM 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G  +    +K+G R + T  L F N    +    NV  G     K+L+  LD     +S
Sbjct: 199 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPV---ENVLGGVGNGAKVLMSGLDYERAVLS 255

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + + +A       Y  +R   G  L +  +M+  +AD+     A  AL + +  + D
Sbjct: 256 AGPLGIMDACMDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A          R  A     +  + A  +  EA++ +GG+GYI E    R +R++    
Sbjct: 316 KADHDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPTGRLWRDAKLYE 371

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 372 IGAGTSEIRRMLIGRELFNETK 393


>gi|256045808|ref|ZP_05448686.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 382

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVSYVHERKQFDQPIGEFQLMQCKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAMAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|209154530|gb|ACI33497.1| Isovaleryl-CoA dehydrogenase, mitochondrial precursor [Salmo salar]
          Length = 414

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 129/373 (34%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK           +     GL        +         H I    +  ++   
Sbjct: 56  PIADEIDKSNEFVGMRDFWKDMGDMGLLGITAPVDYGGSGLGYLDHVIVMEEMSRVSAAV 115

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +    +  K+ + E+                L ++E   
Sbjct: 116 ALSYGAHSNLCVNQMVRHGNTKQKDKYMAKLMTGEH-------------VGALAMSEPNA 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  + P +D  I+ A+ +       +   + +   
Sbjct: 163 GSDVVSMKLKAKKEGDHYILNGVKFWITNGPDADVLIVYAKTDPEAHQKGITAFIVEKGM 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F +       +LG LN     +     L  L  A   
Sbjct: 223 PGFSTAQKLDKLGMRGSNTCELIFEDCKIPVENVLGPLNKGVYVMMSGLDLERLVLAAGP 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +  ++ Y   R   G  +    +M+  +AD+   + A     + +A + D+  
Sbjct: 283 IGIMQSVMDFSVPYLHVREAFGQKIGHFQLMQAKMADMYTRLGACRQYLYNVARACDKGH 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                  ++ +       +C + A  V  + ++C+GG+GYI +  + R  R++    I  
Sbjct: 343 -------FSSMDCAGVILYCAENATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEIGA 395

Query: 445 GSGNAMVLDVLNL 457
           G+     L +   
Sbjct: 396 GTSEVRRLIIGRA 408


>gi|260907334|ref|ZP_05915656.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 384

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 77/368 (20%), Positives = 138/368 (37%), Gaps = 27/368 (7%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           ++ H     L  R+   GL C      +       AH+    +    A   A      S 
Sbjct: 38  IDNHQVDRELWNRAGDAGLLCISIPEEYGGGGGTFAHEAVILQEQGFAGDAAWGNSVHST 97

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A  +    T    K W P + + E             +   + +TE   G+D+ ++ +
Sbjct: 98  IIAHYINTFGTEEQKKRWLPGMATGE-------------LVAAIAMTEPGTGSDLQSVKT 144

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQR 274
           +  +  D  Y ++G K F+S+    D  +++A+     G   V  ++ E     G    R
Sbjct: 145 KAVRDGDE-YVVNGSKTFISNGTHCDILVIVARTSEEPGAKGVSLIVAEVADLPGFSRGR 203

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           + +K+G R   T EL F +    +   L      G ++ M+ L    +  A+   +    
Sbjct: 204 VLDKVGQRGQDTRELFFEDMRVPVDNVLGGVEGRGFIQLMQQLPQERMAIAVAGATTAEA 263

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++ EA+ YA+ R   G  ++     K  +A+ A ++ +       L     + K  +E+ 
Sbjct: 264 AVREAVAYAKEREAFGQPIMKFQNTKFVLAECATEVFSTRTFVDHLTQLHIDGKLTTEQ- 322

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A   KYW       VI   ++  GG GY+ E  IAR Y ++    I  G+   M
Sbjct: 323 ------ASAGKYWATDAQTNVIDRCLQVFGGYGYMMEYPIARMYADARVQKIYGGTNEIM 376

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 377 KELISRGL 384


>gi|325283937|ref|YP_004256478.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315746|gb|ADY26861.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 611

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 106/495 (21%), Positives = 194/495 (39%), Gaps = 69/495 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---VEFHPAWHALLRRSIHDGLHCS 118
             +++   +E AR        L+      G +  +   V+    + A  ++ +  G    
Sbjct: 39  ADLMAQVLEEAARFVEGELLPLNQTGDQQGCQRSENGDVKTPDGFKAAYQKYVQAGWPAL 98

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAP 176
             D  +        H +  A L +M        M P +T  ++ AL  + +P + + + P
Sbjct: 99  DADPQWGGQGMP--HTVANAMLEMMNSANVAWAMYPGLTHGAVSALSEVGSPELQQLYLP 156

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE   GTD+  I ++     DG Y ++G K F+S
Sbjct: 157 KLISGEWTGT-------------MCLTEPHAGTDLGIIRTKAADNGDGTYSITGTKIFIS 203

Query: 237 SPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +   D       ++LA++EG       +  FLVP+ + +     G  NG+    L++K+G
Sbjct: 204 AGEHDFTDNIIHLVLARLEGSPEGTKGISLFLVPKFVPNADGTPGERNGVVCGSLEHKMG 263

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              NAT  L F    G+L+G++N     +  M     L + +  +    V+   A+ YA+
Sbjct: 264 IHGNATAVLNFDGAKGWLVGEVNRGMNHMFIMMNAARLGTGLQGLGLGEVAYQNAVAYAK 323

Query: 341 RRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRL-------ANSFDE 382
            R                 +I  P ++R +        A  AL+  L       A+  DE
Sbjct: 324 DRTQMRAEPRVNPAEQADPIIVHPDVRRMLMTGKAYTEAGRALALWLALALDTEAHHPDE 383

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           AK + E A    ++ PI K +       +  ++ +  GG GYI E  + +  R++    I
Sbjct: 384 AKQK-EAADTVALLTPIAKAFMTDNGFNIAVQSQQVFGGHGYIAEWGMEQFVRDARIGQI 442

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             G+     LD+L                +  D G   + +   L+      ++D+ +  
Sbjct: 443 YEGTNGIQSLDLLG-------------RKVLMDGGKKLQALAGTLQAFADENEDDEVVGE 489

Query: 503 FLTEKIALASSAAAL 517
           ++T+    A+  A L
Sbjct: 490 YITQLGKAANQLATL 504


>gi|71905869|ref|YP_283456.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71845490|gb|AAZ44986.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 592

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 88/458 (19%), Positives = 178/458 (38%), Gaps = 55/458 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKV------EFHPAWHALLRRSIHDGLHC 117
            ++     E ++ A   T  L      G+R   V         P +    +     G   
Sbjct: 36  ELVESILDEASKFA---TGVLDPINKVGDRTGHVCKDGVVTTAPGFKEAYKLFAETGWMS 92

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWA 175
             +D  F          +  A   +         + P +T  ++  +A   +  + + + 
Sbjct: 93  MPFDPEFGGQGLPA--VVSMAVNEMWKGANMAFGLCPMLTGGAIEAIAHHASDELKQKYL 150

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+    +  T             + LTE   G+D+AAI+S+ + + DG Y +SG K F+
Sbjct: 151 PKMVEGTWTGT-------------MNLTEPNAGSDLAAISSKAKAVGDGTYLVSGTKIFI 197

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D       ++LA++         +  FLVP+ L +     G+ N L    +++K+
Sbjct: 198 TWGEHDVAENIIHLVLARLPDAPPGLKGISLFLVPKFLVNDDGSLGARNDLICASIEHKL 257

Query: 280 GNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   + T  + +       G+L+G+ N   G +  M     ++  +  V     +   A+
Sbjct: 258 GIHGSPTAVMSYGEKEGAIGYLVGEENKGIGYMFTMMNHARVNVGLEGVGIAERAYQHAL 317

Query: 337 HYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            YAR R   G           ++  P ++R + D      A   L++  A + D+A +  
Sbjct: 318 WYARERVQGGIIGDKSGEKKPILHHPDVRRLLMDCKARTEAMRTLAYYGAANIDKAHAGD 377

Query: 388 EEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             A     ++ P+ K W  +    + + A++  GG G++EE   A++YR+S   +I  G+
Sbjct: 378 AAAQARIDLLTPVIKGWSTEQGVELSSTALQVFGGVGFVEETGAAQYYRDSRITTIYEGT 437

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
                 D++        +      TL  ++ ++ +++ 
Sbjct: 438 TAIQANDLVGRKLAREKVPGAAMKTLIAEMTATAEELA 475


>gi|34497221|ref|NP_901436.1| isovaleryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103077|gb|AAQ59440.1| probable isovaleryl-CoA dehydrogenase [Chromobacterium violaceum
           ATCC 12472]
          Length = 389

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 148/403 (36%), Gaps = 30/403 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +L R +  +  +     P     D+    PA   L R+    GL        +  V
Sbjct: 10  GETYDLLRESVRDFAE-REIAPRAAAIDQDNLFPA--DLWRKFGELGLLGITVSEQYGGV 66

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH I    +   +        + S    + +           + PK+ + E+   
Sbjct: 67  DMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIYKNGNDAQRSRYLPKLITGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K   G        W  +   +D  ++ 
Sbjct: 124 ----------VGALAMSEPNAGSDVVSMKLRADKTDGGYLLNGSKMWITNGGDADTLVVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + + S  G  +    +K+G R + T  + F N F     D NV  
Sbjct: 174 AKTDVNAGPKGITAFIIEKSFAGFSHGSKLDKLGMRGSNTYPIFFDNCFVP---DENVLG 230

Query: 307 GPVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           G    +K+L+  LD      A   +  M+ SL   + Y   R   G  + D  +M+  +A
Sbjct: 231 GEGNGVKVLMSGLDYERSVLAAGPLGIMQASLDIVVPYLNERSQFGQPIGDFQLMQGKLA 290

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + ++A+ A  + +  + D  ++  +     R  A     +  + A  +  +A++C+G
Sbjct: 291 DMYVKLSASRAYVYAVGQALDRGETGRQ----TRKDAAGAILYAAENATQLALDAIQCLG 346

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G+GYI E +  R  R++    I  G+       +   L   T 
Sbjct: 347 GNGYINEYATGRLLRDAKLYEIGAGTSEIRRWLIGRELMAETR 389


>gi|302561497|ref|ZP_07313839.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479115|gb|EFL42208.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 384

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/375 (21%), Positives = 141/375 (37%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E       ++R+    G      D  +                   A    
Sbjct: 26  PHAAAWDRAEEVD--RGIVRKLGEVGFLGLTVDEEYGGSGGDHLAYCLVTEELGRADSSV 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S S+   A  VA   +    + W P + S  Y                 GLTE   
Sbjct: 84  RGIVSVSLGLVAKTVAAWGSEEQKRAWLPGLTSGGY-------------VGCFGLTEPGT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D   +T++  +   G Y ++G K F+++   +D  ++ A+     G   V   L    
Sbjct: 131 GSDAGNLTTRAVRDGGGGYVVNGTKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIM 323
             GL  + L  K+G R  AT EL   +        L     G    M  L    +  A  
Sbjct: 191 TPGLTRRALHGKLGLRGQATAELVLEDVRVPASAMLGPEGKGFSVAMSALAKGRMSVAAG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   + +L  A+ YA  R   G  +    +++  I+DIA+D+ AA  L++R+A+  D  
Sbjct: 251 CVGIAQAALDAAVRYAGEREQFGKAIARHQLVQELISDIAVDVDAARLLTWRVADLVDRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E++ A       K +  + A      A++  GG GYI+E    +  R++   ++ 
Sbjct: 311 RPFAVESSKA-------KLFASEAAVRAANSALQVFGGYGYIDEYPAGKLLRDARVMTLY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 364 EGTSQIQKLVIGRAL 378


>gi|328952281|ref|YP_004369615.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109]
 gi|328452605|gb|AEB08434.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109]
          Length = 385

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 149/408 (36%), Gaps = 40/408 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           +Y+L+   Q L  +A        A+          D+ E  P    L+R      L   I
Sbjct: 2   DYLLTEEQQMLQELALQ-----IAHDRIKPVRAELDEHEIFPT--ELMRDLAQADLFGVI 54

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               +  +                  +      + +   A    L  +    K + P   
Sbjct: 55  IPEQYGGLGLGCMENCLVLEALSTGCVGIATTFAATFLGAYPFLLYGSEDQKKRYLP--- 111

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                     P+ K        LTE + G+D  AI +   +  D        +W  ++  
Sbjct: 112 ----------PLAKGDHLAAFALTESQAGSDAGAIQTIAVRDGDSYILNGTKQWITNAGE 161

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  + ++A  +   G       + +    G+ + + + K+G R++ T E+ F N      
Sbjct: 162 AGIYTVIALSDRSKGARGASAFIVEADDPGISFGKKEQKMGIRASVTREIVFQNCRIPAN 221

Query: 300 G-DLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQP 353
                   G V  +K    LD +   V        + +L EA+ +AR R   G  +I   
Sbjct: 222 RLIAKEGFGFVIALK---TLDFSRPGVGALALGLAQAALEEAVIFARERQQFGHPIISFQ 278

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            ++  +A++A  + AA AL + +A + D + K  S+E+A A       K +   MA  V 
Sbjct: 279 AVQHMLANMATQLEAARALVYAVARAIDHDPKEFSKESAMA-------KLFPTDMAMQVT 331

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++ +GG GY+ E  + +  R++    I  G+   +   +   L K
Sbjct: 332 TDAVQILGGHGYMREYPVEKMMRDAKILQIFEGTNQILRNVIGQALNK 379


>gi|145590704|ref|YP_001152706.1| butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282472|gb|ABP50054.1| Butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514]
          Length = 410

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 130/378 (34%), Gaps = 26/378 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL++    G         +          +  +  +             +    + + 
Sbjct: 49  RDLLKKIAEQGFFGIGIPEKYGGQGGDHRMAVIMSEEFCRVLPGLSVYFGTNELFLTPIM 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P             P+ +        +TE   G+D+A I ++ +K  D
Sbjct: 109 LYGTEEQKQKYVP-------------PIARGEKFGAFAVTEPCCGSDVAGIQTKAEKKGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                    +  SS ++D FI+LA+     + R+    +   + +    G   ++  +K+
Sbjct: 156 KWVINGRKAFISSSDVADYFIVLARTYPPPDKRLRYLGLTFFVVEKDTPGFKVEQCYHKM 215

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G   N   EL   N        +     G +  M+      +  A  +V   + +   A 
Sbjct: 216 GLFGNHACELVLENVEVPDENRVGEEGMGFLYAMETFDRTRIGVAAQAVGMAQAAFEMAF 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   G  +     ++ +I ++   I +A  L++  A   DE +           +
Sbjct: 276 RYVHQRQAFGYPIAFFQAIQFSIVEMMAKIFSARLLTYLAAKLADEDRRE------FTFV 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K++  ++A  VI+EA+   GG G I E  + R  R      I  G+ N   L    
Sbjct: 330 ASLAKFYATEVAEEVISEAINLHGGVGVIRETGVERFLRSVKITQIYEGANNIQKLVAYR 389

Query: 457 LLEKGTNLFEQLFSTLEQ 474
            L +      Q+   + +
Sbjct: 390 QLVRLLKEKGQIPDEVAK 407


>gi|294650410|ref|ZP_06727772.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823681|gb|EFF82522.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 390

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 140/382 (36%), Gaps = 29/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGLTVSEEYGGTNLGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  ALSYGAHSNLCINQINRNGNAQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ +   G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPHAGAKGMTAFLIEKDM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G  +    +K+G R + T  L F N    +    NV  G     K+L+  LD     +S
Sbjct: 196 KGFSHGHHLDKLGMRGSNTYPLFFDNVEVPV---ENVLGGVGNGAKVLMSGLDYERTVLS 252

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + + +A       Y  +R   G  L +  +M+  +AD+     A  AL + +  + D
Sbjct: 253 AGPLGIMDACMDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A          R  A     +  + A  +  EA++ +GG+GYI E    R +R++    
Sbjct: 313 KADHDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L   T 
Sbjct: 369 IGAGTSEIRRMLIGRELFNETK 390


>gi|83954345|ref|ZP_00963065.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83841382|gb|EAP80552.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 380

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 139/380 (36%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W+K E  P    L  +    G                +           MA
Sbjct: 22  EHIAPFAQKWEKDETIP--KDLWPKIAELGFGGLYVSEDAGGSGLTRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P I S              +  +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAKMLDSFASDDLKSRIMPDILSM-------------NTVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +     G   V  +  
Sbjct: 127 PGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDD-GAAGVSTVYV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +  L++K+G RS  T +++F +     G L+G+                L+ 
Sbjct: 185 EDGTAGLSFGGLEDKMGWRSQPTSQVQFDDCNIPAGNLVGEEGKGFKYAMMGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L   + Y   R   G  +     ++  +A++ +++ AA     + A   
Sbjct: 245 AACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAARVFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K +  +    V+ + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DTGAPD------ATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M + V   + K
Sbjct: 359 QILEGTNEIMRVIVARDMLK 378


>gi|288960818|ref|YP_003451158.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913126|dbj|BAI74614.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 598

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 112/577 (19%), Positives = 209/577 (36%), Gaps = 74/577 (12%)

Query: 42  LLVALIANFPSVVHKELELLGE-YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--V 97
           +L  L          + E + +  ++    ++ AR A      L       G RW +  V
Sbjct: 14  VLRELSELEAVAQLPDAEAIADPELMDAVLEQAARFAREVLAPLDMVGDREGARWSEQGV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P + A  R+ +  G +       +               ++  A     +       
Sbjct: 74  TTPPGFQAAFRQFVEAGWNNIAMPAEYGGQGLPSLLCAPLEEMFTSANKAFCYCPELMAF 133

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +A   +  +   + PK+ S  +             A  + LTE + G+D+ A+ ++
Sbjct: 134 AVKALAAGASETLKSQYIPKLVSGAW-------------AATMNLTEPQAGSDVGALRTR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS 266
                DG + L G K F++    D       ++LA+  G       V  FLVP+ L +  
Sbjct: 181 AVPQPDGTHRLFGQKIFITYGDHDLTENIIHLVLARTPGAPEGSKGVSLFLVPKFLPEDG 240

Query: 267 PNG----LCYQRLKNKIGNRSNATVELEF----SNTFGFLLGDLNVSTGPVEDMKILIYL 318
             G    +    +++K+GN  + T  + +        G+L+G  N     +  M      
Sbjct: 241 WPGRRNDVYCAGIEHKMGNHGSPTCTMVYGGNGEGAVGWLVGAENKGLQTMFVMVNSARF 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
                  +    +  +A+ YAR R   G           +I  P ++R +  +     A 
Sbjct: 301 VVGQEGTAMSERAYQQALAYARERVQ-GRLAKGGTASVPIIRHPDVRRMLLSMRSQTEAM 359

Query: 370 TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A+++ +A + D      + + R E  A+  +M PI K W  + A  V + +++  GG G
Sbjct: 360 RAVAYAIAGARDLASRHPDPEIRRERQAFVNLMIPIFKGWASETAVEVTSTSIQVHGGMG 419

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE---QDLGS 478
           Y+ E  +++  R+   +SI  G+ +     L    L   G        S +    + LG 
Sbjct: 420 YVLESGVSQPLRDVRVSSIYEGTTSIQAHDLVDRKLARDGGAALRAWLSQVHLTLRQLGD 479

Query: 479 SGKKVITILRDSISLCKED-KGLA-RFLTE-----KIALASSAAAL----YRAGMNDIAD 527
            G+    +++ ++    +  +G A R L E     +  LA +   L      AG   +A 
Sbjct: 480 GGRDEFAVIQTNLRKAVDALQGAADRVLAEYERQPQEVLAGAVPFLRLCGVVAGGWQMAR 539

Query: 528 VFLEN-RFLDNCHST-----HCMLHGRFNAAHIIDSL 558
             L   R LD            +L  RF A H++   
Sbjct: 540 AALAAGRQLDRREGNADFLRRKLLSARFYATHVLPQA 576


>gi|229023875|ref|ZP_04180359.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
 gi|228737462|gb|EEL87973.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272]
          Length = 583

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 153/404 (37%), Gaps = 33/404 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 77  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 136

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 137 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 182

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 183 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 237

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 238 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 297

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 298 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 357

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 358 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 417

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            V  +L K    FEQ+   + +   S+ ++    +  +  L K+
Sbjct: 418 TVAKMLMKQ---FEQIEDHVVESEISNVERNHRYILLAKKLLKQ 458


>gi|16124335|ref|NP_418899.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221233017|ref|YP_002515453.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13421179|gb|AAK22067.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220962189|gb|ACL93545.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 597

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 99/554 (17%), Positives = 196/554 (35%), Gaps = 74/554 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P          D L +    + P       +     V+    +  A+        L+   
Sbjct: 5   PPVRDHAFILRDVLNIDQHGDLPGFSDAPFD-----VVEQILEAAAQFTGEVLAPLNTVG 59

Query: 88  GPGGERWDKVE----FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G + D V       P +    ++    G      D ++        H +  A   + 
Sbjct: 60  DKTGCKLDPVTNTVTTPPGFKDAYKQMCEGGWTAIGSDPAYGGQGLP--HVVNLAFSEMS 117

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +       M P +   +  A+    +    + + PK+ S E+  T             + 
Sbjct: 118 SSANMAFSMYPGLAHGAYSAIHVGGSDEQKQTFLPKMVSGEWTGT-------------MN 164

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   GTD+  + ++    +DG Y ++G K ++S+   D       ++LA++EG     
Sbjct: 165 LTEPHCGTDLGLLRTKAVPQADGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGV 224

Query: 252 -RVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
             +  F+VP+ + +          G     L+ K+G   NAT  +++    G+L+G+ N 
Sbjct: 225 KGISLFIVPKFIPNADGSVGPRNEGAKCVGLEEKMGIHGNATCVMQYDEAVGYLIGEENS 284

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILID 351
               +  M     L   +  V+    +   A+ +A+ R   G               +I 
Sbjct: 285 GLKIMFVMMNEARLGVGMQGVAQGEAAYQAAVAFAKDRLQ-GRSLTGPKNAEGPADPIIV 343

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405
            P ++R + +    I    A  F  A   D      +   R + + Y  +M P+ K +  
Sbjct: 344 HPDVRRMLLESKALIEGGRAFLFWTALHGDLSHVHPDPAVREKSSDYMGLMTPVLKGYLT 403

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
                V + A++  GGSG+ E   +++  R+     I  G+     LD++   L  KG  
Sbjct: 404 DKGFQVCSNAVQVHGGSGFTEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGR 463

Query: 464 LFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAAL 517
                F  ++Q +G +   + +    +++   K           +  L     A +A+  
Sbjct: 464 AVMTFFQEIDQFIGENDSDEALKPFIEALGGVKAQLQDGTMWLMQNGLQNPDNAGAASTD 523

Query: 518 YRA--GMNDIADVF 529
           Y    G+  +A ++
Sbjct: 524 YMHLFGLAGLAYMW 537


>gi|312140886|ref|YP_004008222.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890225|emb|CBH49543.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 380

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 118/350 (33%), Gaps = 24/350 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +   F    +     ++                S    S   +A   T    
Sbjct: 50  RAGLLSLPYPEEFGGGAQPYEVYLQVLEEIAARWAAVAVATSVHSLSCFALATHGTDEQK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P +   E                   L+E + G+D AA++ +  ++  G       
Sbjct: 110 SKWLPDMLGGE-------------TIGAYSLSEPQAGSDAAALSCRATEVDGGFRINGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D + + A+     G   +   L      GL + + + K+G R+  T    +
Sbjct: 157 AWITNGGRADFYTLFARTSDD-GARGISCFLVPKDTEGLGFGKPEEKMGLRAVPTTAAHY 215

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            + F     L+G                 L  A ++V   + +L +A+ YA+ R   G  
Sbjct: 216 DDAFVPTERLIGKTGQGLPIAFSALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKR 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +ID   +   +AD+A  + +A A     A   D     S         A + K      A
Sbjct: 276 IIDHQGLGFVLADMAAAVDSARATYIDAARRRDAGLPYSR-------NASVAKLVATDAA 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++  GG GY ++  + R+ RE+    I  G+     L +   L
Sbjct: 329 MKVTTDAVQVFGGYGYTQDFPVERYMREAKITQIFEGTNQIQRLVIARQL 378


>gi|54293844|ref|YP_126259.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens]
 gi|53753676|emb|CAH15134.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens]
          Length = 384

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 143/373 (38%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  + P    +LR +   G+   +           +              +  
Sbjct: 26  PMADFWDEQGYFPI--EILREAAQLGMAGMVVREDIGGAQLSRLDAALIFEQLATGCIPT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     AS+V    +  + K W PK+ S E             V     LTE   G
Sbjct: 84  SAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLTEPESG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++  K     Y L+G K F+S   +SD ++ + +  G      +  LL + + 
Sbjct: 131 SDAASLKTRAVKEG-EYYVLNGAKAFISGGSVSDVYLCMVRT-GDESHHGISCLLIEKNT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + +L+ K+G R+  T  L F N    +   +G+  +      +      ++ A  S
Sbjct: 189 PGLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIALNALNGGRVNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G    L  +  Y   R   G  L     ++   +D+  D  AA  + +R A + D   
Sbjct: 249 LGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFSDMLTDYEAARLMVYRAAAAMDN-- 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +A  A +   + K     +A  +  +AM+  GG GY+ +  I R +R+   + IL 
Sbjct: 307 ----DAPNAPMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQIERIFRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNL 457
           G+   M   +   
Sbjct: 363 GTNEIMREIIAKA 375


>gi|299770605|ref|YP_003732631.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700693|gb|ADI91258.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 390

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L + S 
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLVEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L       + +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGTKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|159036532|ref|YP_001535785.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915367|gb|ABV96794.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 387

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 125/376 (33%), Gaps = 24/376 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P     D+    P   A          H       +                   A   
Sbjct: 32  TPHAAEADETGEFP--KASYDALRAADFHAPHIPVEYGGAGADALATAIVIEEVARACAS 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  + + +      + L  +  + + +               P+          L+E   
Sbjct: 90  SSLIPAVNKLGTMPLILAGSAELKRTYL-------------TPVGAGDAMFSYCLSEPEA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA++++ ++  D        +W  ++ +SD + + A  +   G   +   + + S 
Sbjct: 137 GSDAAAMSTRAERDGDHWVLNGVKRWITNAGVSDFYTVFAVTDSAAGSRGISAFVVEKSD 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+ +   + K+G + + T E+            +    TG    M+ L    +  A  +
Sbjct: 197 PGVSFGAPEKKLGIKGSPTCEVYLDGVRIPADRMIGAEGTGFATAMQTLDHTRVTIAAQA 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A  Y R R   G  + D   ++  +AD+ + + AA  L++  A   +   
Sbjct: 257 VGIAQGALDYAKGYVRERRQFGRAVADFQGVQFMLADMGMKLEAARQLTYAAAGRSERGD 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                 A         K +    A  +  +A++ +GG GY  +  + R  R++    I  
Sbjct: 317 ------ADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYE 370

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   L K
Sbjct: 371 GTNQVQRIVMARQLLK 386


>gi|239503653|ref|ZP_04662963.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii AB900]
          Length = 390

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGVKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYSAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|224368857|ref|YP_002603019.1| Acd7 [Desulfobacterium autotrophicum HRM2]
 gi|223691574|gb|ACN14857.1| Acd7 [Desulfobacterium autotrophicum HRM2]
          Length = 453

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 136/378 (35%), Gaps = 32/378 (8%)

Query: 96  KVEFHPAWH---------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +V    AW+          +L R+   GL  S   +++                   A  
Sbjct: 23  EVVLPQAWYYDARDETPLHILERAFDAGLSNSDIPKAYGGKGLGIVEGSIITEEISSACP 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +      + L +   + + +   +F++E+              I    +E  
Sbjct: 83  GMATSIFDNSLGMEPLILSSNEFLKEKYLT-LFAKEF------------KLISFATSEPT 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D++++    +   +         W  +  ++D F + A V+       +     D  
Sbjct: 130 MGSDVSSVRCLARPDGEDYILNGTKYWVTNGGIADYFSIFATVDPEKKHQGICAFFVDRK 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD--SAIM 323
             G+   +   K+G RS+ TV + F N        L     G +  M+            
Sbjct: 190 WPGIRVGKPIPKMGQRSSNTVGVHFDNVRVPKDHILAEPGEGFLLSMRTFSRTRPVIGAF 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R ++  A+ YA++R      + D   ++  I+++   I A+  L ++ A   D  
Sbjct: 250 AIGAARSAMEYAMDYAKKRRAFDQKIGDFQAIQFKISEMYQKIEASRLLVWKAAWEADNG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              +       + A I K++  + A  V++EA++ +GG GY +   + + YR++    I 
Sbjct: 310 VDPT-------LNASIAKFYATETAIEVVSEALQILGGYGYTKMFPLEKLYRDTRLLRIY 362

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+     + V   L  G
Sbjct: 363 EGTSEVQRMIVAGYLMGG 380


>gi|222095939|ref|YP_002529996.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|221239997|gb|ACM12707.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
          Length = 569

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 141/374 (37%), Gaps = 30/374 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L  ++   GL        +    + K    + A ++           +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKVVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFE 466
            V  +L K     E
Sbjct: 404 TVAKMLMKQVEQIE 417


>gi|109098972|ref|XP_001091115.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Macaca mulatta]
          Length = 412

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK +  PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEQLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A +YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|308272369|emb|CBX28974.1| Acyl-CoA dehydrogenase [uncultured Desulfobacterium sp.]
          Length = 382

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 34/379 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           GP     D+    P    ++ +            R +        ++ I    +  +   
Sbjct: 25  GPIAHEIDQNARFP--WEIIEKMRPLNFFGLQVPREYGGADMDSISYAIVIEEISRVCAA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +    + +A   T    + + P++ S E                   LTE  
Sbjct: 83  MGLCVTVHNSVGTNPIAQFGTKEQKEKFLPQLASGEC-------------IGAFCLTEAN 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GTD   + +   +  +  Y ++G K F  +  +  + ++ A  +          L+ + 
Sbjct: 130 AGTDAGGVETTAVEDGED-YVINGTKIFVTNGGICGSALIFAISDSENQRSSNSVLIVEK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           +  G     +++  G R+N    L F +         N+     + +KI L  LDS  + 
Sbjct: 189 NTPGFSVGEIEDLCGMRANPVSSLFFEDCRVPKS---NLLGRKGDGLKIGLSTLDSGRIG 245

Query: 325 VSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +A+A     + Y++ R      L     ++  +AD+A +I AA  L +R    
Sbjct: 246 IAAQALGIAQAAFEDALKYSKERQQFKKPLSTFQTIQNYLADMATEIDAARLLLYRACAI 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K+   EAA A       K +C   A  V   A++  GG GY +E  + R++R++  
Sbjct: 306 KDAGKAFGAEAAMA-------KLYCSTTASRVTGLAVQIHGGYGYSKEYDVERYFRDAKV 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 359 TEIYEGTSEVQRMVIARSL 377


>gi|207727712|ref|YP_002256106.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590953|emb|CAQ56565.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 376

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + R+    G +      +                         
Sbjct: 24  PHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEALGGAGLDYLSLALILEEIAAGDGGT 81

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +    SM+         + W               P+ +  +     LTE   
Sbjct: 82  STVVSVNNCPVCSMLMAYANDAQKQQWL-------------VPLARGEMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA+ +   +  D        ++  S   +D  I++A  +   G   +   L   S 
Sbjct: 129 GSDAAALRTTATRDGDHWVLNGVKQFITSGKHADVAIVMAVTDKAAGKRGISAFLVPTST 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    RL++K+G  S+ T ++ F +      G L  + G    M  L  L+   + ++ 
Sbjct: 189 PGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG-AQGEGYRM-ALSGLEGGRIGIAA 246

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +       A+ YA+ R   G  L     ++  +A++A  I  A  + +  A+  D 
Sbjct: 247 QSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMATRIDVARQMVWHAASLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A       K    +MA  V ++A++  GG GY+ +  + R YR+     I
Sbjct: 307 GRPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGYVSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   + +   L
Sbjct: 360 YEGTSDIQKILIARAL 375


>gi|16124334|ref|NP_418898.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           CB15]
 gi|221233016|ref|YP_002515452.1| long-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13421178|gb|AAK22066.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           CB15]
 gi|220962188|gb|ACL93544.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus
           NA1000]
          Length = 391

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 129/365 (35%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL        +        H++          ++       +      + 
Sbjct: 48  RDMWTKAGEAGLLGLSTPEQYGGAGGDYRHEVVLMEQLGKKGVDGFGASLHNAIVMPYIV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P++ + E             +   + +TE   G+D+  I +  +K  +
Sbjct: 108 HYGTEEQKQRWLPRMVTGE-------------LVSAIAMTEPGAGSDLQGIKTTAKKAGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGSPN-----GLCYQRLKN 277
             Y ++G K F+++  +   I ++A+ +   G      +  +         G    R  +
Sbjct: 155 -QYVINGSKTFITNGQTANLICVVAKTDPAGGARGTSLIFVETDGPDGLLEGFERGRNLD 213

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLA 333
           K+G  +  T EL F++        L      G  + M  L    L+ A+  ++ +  +L 
Sbjct: 214 KLGQEAQDTSELFFNDVKVPTENLLGTDEGQGFFQLMGQLPQERLNIAVQGMATIERALE 273

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             I Y + R   G  +ID    +  +A+   +   A            E K  +  A+ A
Sbjct: 274 LTIAYVKDRKAFGKAIIDFQNTQFVLAECKTEATVAKVFVNHCIGQHLEGKLDAATASMA 333

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  KYW   +   ++   ++  GG G++ E  IAR Y++S    I  G+   M L 
Sbjct: 334 -------KYWVSDLENKIVDRCLQLFGGYGFMNEYPIARMYKDSRIQRIYGGTNEIMKLL 386

Query: 454 VLNLL 458
           +   L
Sbjct: 387 IARTL 391


>gi|167044721|gb|ABZ09391.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine microorganism HF4000_APKG7N23]
          Length = 389

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 23/311 (7%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            +  +AL       K + PK+ S E+                  L+E   GTD AA+ ++
Sbjct: 94  CSMTIALNGNEEQKKKYLPKLASGEH-------------LGAYSLSEAGSGTDAAAMVAK 140

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCY 272
             +            W  +   +D F++ A+V      G+     V   + +    G   
Sbjct: 141 ATEDGSNFILNGEKMWVTNGTTADLFVVFAKVTNDPEYGKKKHGGVTSFIIEKDFEGFKI 200

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++K+G RS+ T  L   N        L  V  G    M  L    +  A  ++   +
Sbjct: 201 GKKEDKLGIRSSDTCTLILDNCKVPKRNVLGEVGKGFAIAMNALDNSRIGIAAQALGIAQ 260

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ Y++ R   G  +     +   +A++A+ I A     ++ A S    K   E 
Sbjct: 261 GAYETALKYSKERETFGKPIAAHQSIGNYLAEMAMRIDAVRLQVYKAAWSK--MKHYEEN 318

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                + A   K      A  V  +A++ +GG GY  +  + R +R++    I  G+   
Sbjct: 319 GNRHTLEASFAKLNAGDTAMWVSEKAVQILGGYGYTTDFPVERFFRDAKITQIYEGTQEV 378

Query: 450 MVLDVLNLLEK 460
             L +   + K
Sbjct: 379 QRLVIAREIGK 389


>gi|152997029|ref|YP_001341864.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150837953|gb|ABR71929.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 592

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 78/462 (16%), Positives = 171/462 (37%), Gaps = 50/462 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRS 110
             + L+     + +   +E A+ A      L+      G R+    V     W    ++ 
Sbjct: 25  ALESLDGFDPELANAVMEEAAKFAAGMLAPLNQIGDVQGCRFQDGNVITPDGWQDAYKQF 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G         F      +        ++L A L      + +   + ++       +
Sbjct: 85  AESGWIGLALPEEFGGQGLPKYIAQPVNEMWLSANLAFVMFQALAQGGSEILLNFANESI 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI S E+              + + LTE   G+D+ A+ ++     DG Y + G
Sbjct: 145 QQRYLPKIVSGEW-------------TVAMALTEPNAGSDLGALNTKAVPQQDGTYKIKG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------GSPNGLCYQR 274
            K +++    D     A ++LA+  +   G   +   +            G  N +    
Sbjct: 192 QKIYITYGDHDLTDNIAHLVLARTPDAPAGSRGISLFIVPKYRVSDDGSLGGFNDVRCTG 251

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +++K+G   + T  + +    +  G L+G+LN     +  +     L   +  V+   + 
Sbjct: 252 IEHKMGLHGSPTCSISYGDQDDCVGELVGELNQGLMAMFVLMNEARLSCGLQGVALGELG 311

Query: 332 LAEAIHYARRRHV----SGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              A+ YA+ R       G    +++   +KR + ++  +  A  AL +++A   D  +S
Sbjct: 312 YQRALEYAKERTQGTNAQGEKVAIVEHADVKRMLLEMRSETFALRALGYQIAAQIDATES 371

Query: 386 RSEEAA-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++            ++ PI K +  +    +  + ++  GG G++EE  +A+  R++ 
Sbjct: 372 AVDKTESNQSKKDRVALLTPIFKAFATERVNVMAGQVIQVFGGMGFVEETGVAQIMRDAR 431

Query: 439 ANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGS 478
             +I  G+      D++    +G       +L + + Q  GS
Sbjct: 432 ITTIYEGTTGIQARDLMFRKVRGDQGKALTELLADITQLAGS 473


>gi|84503054|ref|ZP_01001150.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84388598|gb|EAQ01470.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 379

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 145/400 (36%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q +  MA           P    W++ E  P    L       G        
Sbjct: 2   DFALTDEQQAIFEMAKAFG--QERIAPHARDWEEAESIP--KELWPEIAALGFGGLYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S     A M+    +        P + S E
Sbjct: 58  ENGGAGLGRLDATLVFEALSMACPSVAAFLSIHNMCAKMIDSFGSQEFRDRVLPGVVSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                          +   LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SD
Sbjct: 118 -------------TVLSYCLTEPGSGSDAAALRTRAERTNEG-YRLNGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
           A++++A+  G  G   V  L  +    GL +  L+ K+G +S  T +++F N       L
Sbjct: 164 AYVVMART-GAEGPRGVSTLYVEDGAEGLSFGGLEQKMGWKSQPTRQVQFDNCDVSAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ +  S+   + +L   + Y   R   G  +     ++  
Sbjct: 223 IGEEGKGFTYAMVGLDGGRLNISACSLGAAQTALDMTLAYMAERKAFGQPINQFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +++ AA     + A   D+          A     + K +  +    V+ + ++ 
Sbjct: 283 LADMEIELQAARTFLRQAAWKLDQGAPD------ATKFCAMAKKFVTETGSKVVNQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M L V   +
Sbjct: 337 HGGYGYLADYGIEKLVRDLRVHEILEGTNEIMRLIVARQM 376


>gi|329896697|ref|ZP_08271690.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
 gi|328921633|gb|EGG29009.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium
           IMCC3088]
          Length = 378

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 81/394 (20%), Positives = 145/394 (36%), Gaps = 41/394 (10%)

Query: 83  QLHAYGPGGERWDKVEFHPAW----------HALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           +L  +     R  + E  P +           +L       GL C      +        
Sbjct: 5   ELTLFKDMARRAFEAEIQPYYTQWEEDKWVPRSLWNTLGEAGLLCPDVSEEYGGAG--TG 62

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVA----LMTTPRVHKDWAPKIFSREYDPTNK 188
            ++  A +  M+ +  G L S     +++VA       T    + W PK+ + E      
Sbjct: 63  PEVTLAMIEEMSYMGFGGLASGYGIHSNIVAPYLIHHGTDAQKERWLPKMVTGE------ 116

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  V   LG++E   G+D+  I +   +  D  + L+G K F+++ M    +++A 
Sbjct: 117 -------VVGALGMSEPGAGSDVQGIKTNAVRDGDE-WILNGSKIFITNGMHADLVIVAA 168

Query: 249 -VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G       L D S  G    +  +KIG  ++ T  L F +       LLG+ N 
Sbjct: 169 ITDPGKGAKGTSLFLVDTSLPGFERGKKLDKIGQHASDTALLFFQDMRLPADALLGEENK 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               +        L  A  +V   + +L   + Y + R   G  +      +  +AD+  
Sbjct: 229 GFVIMMQELPRERLGIAAQAVYQAQGALDLTVQYVQERQAFGQPIAKFQNTRFKLADVKT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +IA   AL    A  +   +  +++AA  ++         C M   V+ + ++  GG GY
Sbjct: 289 EIALNKALYESCAAQYARGELTTDDAAMLKLA-------SCDMQCRVVDDCLQLFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  I+R Y ++    I  GS   M   V   +
Sbjct: 342 TTEYPISRFYVDARIQRIYGGSAEIMRELVARSI 375


>gi|264680338|ref|YP_003280248.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210854|gb|ACY34952.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 598

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 86/454 (18%), Positives = 162/454 (35%), Gaps = 64/454 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + I  G      D  +          + +A   ++        M P 
Sbjct: 74  EVTTPKGFKQAYAQFIEGGWPALSCDPEYGGQGLP--FVLNSALYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    TP   K +  K+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ + ++DG Y ++G+K F+S+   D       ++LA++         +  F+VP+  
Sbjct: 179 LRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVVPKFK 238

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    L++K+G   NAT ++      G L+G+ N     +  M     
Sbjct: 239 VKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGLQAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P ++R +      
Sbjct: 299 LGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVRRMLLTAKAY 358

Query: 366 IAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                ALS       D      + K R +      ++ PI K +           + +  
Sbjct: 359 AEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWTATMLSQQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG G+I+E  + +  R++  N I  G+     LD+L     G               G++
Sbjct: 419 GGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQ-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            KK   ++   +     ++ ++ F+T    L   
Sbjct: 466 LKKFGKLIAQLVEEEGVNEKMSEFITPIAVLGEQ 499


>gi|187927093|ref|YP_001893438.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665422|ref|YP_002983781.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187728847|gb|ACD30011.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867449|gb|ACS65109.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 380

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 138/375 (36%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW+   +     A+  ++   G HC+    ++        +          A    
Sbjct: 28  PHHERWEDQGYVD--RAIWEKAAAAGYHCASMPEAYGGAGADIRYSTVLMEEIARAGATG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  + + + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYLLHYGSEALKQSYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+  + +   + SDG  Y L+G K F+++   +D  I++A+     G       + D S
Sbjct: 133 SDLQGVRTTATRSSDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKGTSLFVVDTS 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F N       LLG+ +     +        L  AI 
Sbjct: 193 MEGFSKGKRLKKVGMKAQDTAELFFDNVRVPAANLLGEEHRGFAYLMQELPWERLQIAIG 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  ++D    + A+A++  ++        +        
Sbjct: 253 AIASAEGALEWTLRYVRERQAFGKSILDFQTARHALAELKTEVQIGRVFVDQCIALKLAG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  +  A+ A       KYW   +   V+   ++  GG GY+ E  IAR + +S    I 
Sbjct: 313 KLDAATASMA-------KYWTTDLQFKVMDRCVQLHGGYGYMWEYPIARAWADSRVQQIY 365

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 366 GGTNEIMKELIARTL 380


>gi|160901422|ref|YP_001567004.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160367006|gb|ABX38619.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 395

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 136/395 (34%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 14  GEDIDALRDAVREFAQAE-IAPRAGEIDRDDQFPM--DLWRKFGDLGVLGITVSEQYGGA 70

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +           + PK+ S E+   
Sbjct: 71  NMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGNESQKAKYLPKLISGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYFLLNGTKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +    V   L +    G    +  +K+G R + T EL F N        L    
Sbjct: 178 AKTEPELNARGVTAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPAENVLGGLN 237

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 238 NGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMY 297

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  + ++ +A + D     +E     R        WC + A  +  E ++  GG+G
Sbjct: 298 TVLQAGRSFAYTVAKNLD--LLGTEHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNG 355

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 356 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|323487520|ref|ZP_08092814.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
 gi|323399202|gb|EGA91606.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
          Length = 379

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 134/364 (36%), Gaps = 26/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMV 162
             L R+   +          +                   A + A  ++ SP+      +
Sbjct: 37  KELYRKMAQNQYFGVTIPEEYGGCGAGYVAMAIVMEELARASVSATLYVTSPNTLLGLPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ K        LTE   G+D A   +  +K  
Sbjct: 97  LNYGTEEQKEKYL-------------VPVMKGEKEGTFALTEPSAGSDAATQNTIARKDG 143

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++ P+ D  ++ A  +  +G   +   + +    G    + + K+G 
Sbjct: 144 D-YYIINGRKAFITAAPLCDFAVVFAATDVSLGARGITAFIIERDTPGYSVGQPERKMGV 202

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T ++   N        L          MK L    L  A   +     ++ EA+ Y
Sbjct: 203 NGSPTADIILENVKVHKSQILGEEGKAFQMAMKTLDSGRLVVAAQCLGIAEAAMKEAVGY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R+R   G  L +   ++  +AD+   +  A AL +  A   D   + ++EAA A     
Sbjct: 263 VRQRRQFGAALSEFQGIQFMLADMETKLCCARALIYDAAEKKDAGMNITKEAAAA----- 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+  +M   + A+A++  G  GY+++  I R +R++   +I  G+   +   +   +
Sbjct: 318 --KYFASEMCNEIAAKALQLHGAYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQV 375

Query: 459 EKGT 462
            KG 
Sbjct: 376 LKGR 379


>gi|289674347|ref|ZP_06495237.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|330979901|gb|EGH78201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 601

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 179/502 (35%), Gaps = 64/502 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGTRAMVYFTAKQVDIVKYSEDPEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADALLAFMTPIAKAFMTEVGFEAANHGVQVYGGHGFIAEWGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 444 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEVVQEFVTP 490

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 491 LAALNKEWGDLTLKVGMAAMKD 512


>gi|195491150|ref|XP_002093438.1| GE21295 [Drosophila yakuba]
 gi|194179539|gb|EDW93150.1| GE21295 [Drosophila yakuba]
          Length = 420

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 150/431 (34%), Gaps = 37/431 (8%)

Query: 38  SSDSLLV--ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
             D  L     +A++P        + G        +E+A   N+   +L    P  +  D
Sbjct: 16  RGDRPLSWTRTLAHYPVND----AMFGLDEDRQKLREVAF--NFFQKELA---PLAKEID 66

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           K++         ++    G      +  F         H I        A   A    + 
Sbjct: 67  KLDNFKDLRPFWKKLGDLGFLGITAEPDFGGTGGSYLDHCIIMEEFSRAAGGVALSYGAH 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    T    + + PK+ S E+               GL ++E   G+D+ ++
Sbjct: 127 SNLCINQLTKNATLEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSM 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCY 272
             + ++  D         W  +   +D  I+ A+  G        +   + + +  G   
Sbjct: 174 KLRAERKGDYYVLNGSKFWITNGSDADTLIVYARTGGSDVPDKHGITAFIVETAWEGFSV 233

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +  +K+G R ++T EL F +       +LG  N     +        L  A   V  M+
Sbjct: 234 AQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENKGVYVLMSGLDFERLVLAAGPVGLMQ 293

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA +R     ++ +  +++  +AD+   ++A  +  + +A + D      ++
Sbjct: 294 AACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTSLSACRSYLYTVARACDAGNRSPKD 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                        +  + A  V  +A++ +GG+GYI E    R  R++    I  G+   
Sbjct: 354 -------CAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEI 406

Query: 450 MVLDVLNLLEK 460
               +   L +
Sbjct: 407 RRWLIGRQLNQ 417


>gi|299532369|ref|ZP_07045761.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298719607|gb|EFI60572.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 388

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 72/406 (17%), Positives = 140/406 (34%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +      WD+    P     + ++   G       
Sbjct: 2   DFELSEDQRAFADTARAFAQAELAPH---AAEWDREHIFP--RDAIAKAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    T  V  +W  ++ S 
Sbjct: 57  ESIGGLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEQLTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        S      LTE   G+D A++ ++ + + +         +   +  +D
Sbjct: 117 -------------SKLASYCLTEPGAGSDAASLKTRAELVGNEYIVNGSKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  +   G   +          G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVLMARTGDAGSGASGISAFAVPADAAGVSYGKKEEKMGWNSQPTRVISFDNVRIPAHN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L +A  Y + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKSIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V  EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFMVCNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   + +G  
Sbjct: 338 LHGGYGYIREYPLERLMRDARVHQILEGTNEIMRVIIARRMLEGDA 383


>gi|260563101|ref|ZP_05833587.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260153117|gb|EEW88209.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
          Length = 392

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAMAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|94984213|ref|YP_603577.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94554494|gb|ABF44408.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 612

 Score =  266 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 99/492 (20%), Positives = 182/492 (36%), Gaps = 66/492 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRSIHDGLHCS 118
             +++   +E AR        L+      G        V     + A   +    G    
Sbjct: 39  ADLMNQVLEEGARFVETELVPLNQIGDQEGCTRHEDGSVTTPTGFKAAYEKYRQAGWTAL 98

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D ++             + +   A +  G     S  + S ++ + +  +   + PK+
Sbjct: 99  DADPAYGGQGMPHLVSTVMSEMITSANVAWGMYPGLSHGAYSALSAVGSEELKNLYLPKL 158

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+  T             + LTE   GTD+  I ++     DG Y ++G K F+S+ 
Sbjct: 159 VSGEWTGT-------------MCLTEPHAGTDLGIIRTKATDNGDGTYAITGTKIFISAG 205

Query: 239 MSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA++EG       +  FLVP+ + +     G  N +    L++K+G  
Sbjct: 206 EHDLAENILHLVLARLEGSPMGTKGISLFLVPKFIPNADGTLGERNAVVCGSLEHKMGIH 265

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            NAT  L F    G+L+G++N     +  M     L + +  +    V+   A+ YA+ R
Sbjct: 266 GNATAVLNFDGAKGYLVGEINKGMNHMFIMMNAARLGTGLQGLGLGEVAYQNALAYAKER 325

Query: 343 HVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKS 385
                            +I  P ++R +        A  AL+  LA      +   +   
Sbjct: 326 LQMRHEPRVKPSEPADPIIVHPDVRRMLLTGKAYTEAGRALAMWLALNIDLEHHHPDEAG 385

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R E A    ++ P+ K +           + +  GG GYI E  + +  R++    I  G
Sbjct: 386 RQEAADLVALLTPVAKAFMTDNGFQTAVLSQQVFGGHGYIREWGMEQFVRDARIGQIYEG 445

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                +  D G   +K+  +L+  +    ED+ LA +L 
Sbjct: 446 TNGIQALDLLG-------------RKVLMDGGKKLQKLAGMLQQFVEENAEDEQLAPYLD 492

Query: 506 EKIALASSAAAL 517
           +   L+ +A+ L
Sbjct: 493 Q---LSKAASQL 501


>gi|148652993|ref|YP_001280086.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572077|gb|ABQ94136.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 383

 Score =  266 bits (681), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 135/380 (35%), Gaps = 36/380 (9%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   G + D+     AW      +   G  C+     +        H+         A
Sbjct: 34  EQWRENG-KIDR----DAWLE----AGEMGFLCASMPEEYGGGGGDFGHEAAILLAQAQA 84

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M  S   A  +    T    K W PK+ + EY                + +TE
Sbjct: 85  NQSGFGGMVHSGIVAPYILKHGTQEQKKAWIPKLATGEY-------------VGAIAMTE 131

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLE 263
              G+D+ AI +   K  D  Y ++G K F+++      I+LA + +   G   V  ++ 
Sbjct: 132 PTTGSDLQAIKTYAVKEGDD-YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLIVV 190

Query: 264 DGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYL 318
           +     G    R   K G  +  T EL FSN        L      G ++ M+ L    L
Sbjct: 191 ETDGLEGFERGRNLKKTGLSAQDTSELFFSNVRVPQNNLLGSIEGLGFIQMMQELPQERL 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A+     ++++L   + Y ++R   G  +      +  +A++  D  A  AL      
Sbjct: 251 IIALSGCGAIKLALELTLDYVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVE 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           +  E K  +         A + KYW  +    VI E ++  GG GY+ E  IAR Y ++ 
Sbjct: 311 AMIEGKLTA-------PQASLIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADAR 363

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M       +
Sbjct: 364 VQKIYGGTNEIMKELASRFM 383


>gi|262376444|ref|ZP_06069673.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
 gi|262308583|gb|EEY89717.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
          Length = 600

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 90/485 (18%), Positives = 170/485 (35%), Gaps = 59/485 (12%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERW-----DKVEFHP-AWHALLRRSIHDGLHCSIWD 121
               E+A  A++   +L      G++      D V   P  + A   + +  G      D
Sbjct: 41  EQYLEVA--ADFCQNELLPINATGDQQGCRLQDGVVTTPDGFKAAYDKYVELGFTSLTGD 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            ++        ++I  + +        G     S  +   +    +    + +   + + 
Sbjct: 99  EAYGGQGFPTLYRIAISEIITATNWSWGMYPGLSHGAMRTLEHHGSDEQKQKFLVPLIAG 158

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            +  T             + LTE   G+D+  I ++     DG Y +SG K F+S+   D
Sbjct: 159 RWTGT-------------MCLTESHAGSDLGLIRTKAVPNEDGSYSISGEKIFISAGEHD 205

Query: 242 -----AFIMLAQ-VEGRVGCFLVPRLLEDG----------SPNGLCYQRLKNKIGNRSNA 285
                  I+LA+  +   G   +   +             S NG+    L++K+G   NA
Sbjct: 206 LAENIVHIVLARLPDAPAGTKGISLFIVPKYNLDEAGNVASRNGVVCSALEHKMGIHGNA 265

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342
           T  L F N  GFL+G  N     +        + +AI  ++    S   A+ YA+ R   
Sbjct: 266 TCVLNFDNAKGFLIGPENRGLNCMFTFMNSARIGTAIQGLAAAESSYQGALAYAQDRLAM 325

Query: 343 ------HVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS------ 387
                    G     +I  P ++  +    +    + AL++ LA   D A++        
Sbjct: 326 RSLEGAKAPGQPADPIIVHPAVRNMLLTQKVFAEGSRALAYYLATYADIAEATDSPEEKK 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ PI K    +         M+  GG GYI E  + +  R++   S+  G+ 
Sbjct: 386 AAEDRLALLTPIAKALMTETGIEAAKHGMQIFGGHGYIAEHGMEQIARDARIASLYEGTT 445

Query: 448 NAMVLDVLNLLEKGT--NLFEQLFSTLEQDLGSSGKKVI--TILRDSISLCKEDKGLARF 503
               +D+L     G+   L   L   ++  +    + V     +     L ++   L R 
Sbjct: 446 EIQSIDLLARKVLGSKLGLLTALTDEIQGFVKEHQQHVQFSQQVAQVSQLTEQWLKLTRT 505

Query: 504 LTEKI 508
           + E+ 
Sbjct: 506 IQEQA 510


>gi|261420445|ref|YP_003254127.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319768113|ref|YP_004133614.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261376902|gb|ACX79645.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317112979|gb|ADU95471.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 594

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 90/446 (20%), Positives = 165/446 (36%), Gaps = 60/446 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +      A     A   A    +     +  + L
Sbjct: 66  KLLRKAGELGLLSADIPEEYGGLGLDKVSSAIIAEKMAPAGGFAISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQKYLPYLATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  +S  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNSGFADVFVVYAKVDGEH----FTAFIVERDFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENVLGEIGKGHVIAFNILNIGRYKLGLGAVGGAKRALEITLKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + AA +  +R    FDE             K  +
Sbjct: 289 NQRQQFKRPISQFTLTQEKFATMASRLYAAESSVYRTVGLFDERMGLLDAEKAKDGKEVA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  ++   ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATEVLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L L +K   L E+L     ++ GS              + +
Sbjct: 409 EINRLLVPGMYLKKAVKGELPLFQKAQQLQEELMMMAAEEPGS-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAG 521
           ++K L R   +KIAL  +  A  + G
Sbjct: 456 QEKYLVRN-AKKIALMVAGLAAQKYG 480


>gi|315925437|ref|ZP_07921648.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621338|gb|EFV01308.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 381

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 135/365 (36%), Gaps = 28/365 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A++ +    G        ++  +   +  K         A      L+S    S+ ++ 
Sbjct: 39  KAVIAQMAELGFMGINIPEAYGGIGMGEEVKALVIEEIAKADASVAELLSVHTLSSDIIN 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +  +  S +                   LTE   G+D AA  ++     D
Sbjct: 99  RHGTEEQKEKYLARACSGQ--------------VGAFALTEPGAGSDAAAAKTKAVPDGD 144

Query: 224 GIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y ++G K F+S+      D  I++A  +       +  ++ D    G    + ++K+G
Sbjct: 145 D-YVINGTKCFISNMGKDEGDYVILIALTDPEKKTRGMSAIIVDRGTPGFSVGKAEDKMG 203

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R+    EL F +       LLG+     G          +  A  +V     +L  A+ 
Sbjct: 204 LRAAPVSELIFEDCRVPKTQLLGEAGKGFGLAMAGLDGGRIGMAAQAVGLAEGALTAAVQ 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +     ++  +AD+A    AA  L+   A   +     S+EAA A    
Sbjct: 264 YAGERVQFGKPISANQGIQWYLADMATRTEAAKLLTLNAAKLREAGLPVSKEAAMA---- 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KY+  + A  V  +A++  GG GY+++ +I R YR++    +  G+     + +   
Sbjct: 320 ---KYYASEAAVYVADKALQIHGGYGYMKDYAIERVYRDARIIPLYEGTSEVQKMVISRA 376

Query: 458 LEKGT 462
           +  G 
Sbjct: 377 VIAGR 381


>gi|221209486|ref|ZP_03582467.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221170174|gb|EEE02640.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 377

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD+    P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDRDAQLPD--AVVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPEQKARWL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    V     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 112 -GDMAAGRVIGAFCLTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGMAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  +   N     + + N+  
Sbjct: 170 AMTDPDAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITLENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLYASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|148558944|ref|YP_001258435.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148370201|gb|ABQ60180.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 592

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATDSNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|83593170|ref|YP_426922.1| butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576084|gb|ABC22635.1| Butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 379

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 131/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     LR +   G         F      +            A    
Sbjct: 26  PRARAWDEGAIFPV--ETLRAAAALGFAGIYVGEEFGGAGLTRLDAALIFEELATACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    ++SM+       +     P + + E                   LTE   G
Sbjct: 84  AAFLTIHNMASSMIDRFAGRDLRARLLPGLMTMERF-------------ASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  DG Y LSG K F+S     D ++++A+  G  G   +   + +   
Sbjct: 131 SDAAALRTRAVRDGDG-YRLSGQKAFISGGGHSDVYVVMART-GEAGAKGISAFVVEAGA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G +S  T  + F +        L     G    M  L    L+    S
Sbjct: 189 PGLSFGKPEAKMGWKSQPTCAVMFDDLRVPASHRLGEEGEGFRIAMMGLDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +   A+ Y + R   G  + +    +  +AD+A  + AA  L  + A   D   
Sbjct: 249 LGGAKGAFEAALAYVKERRQFGKAIAEFQATQFTLADMATALEAARLLLHKAAWLLDAGD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K        +V  +A++  GG GY  +  + R  R+   + IL 
Sbjct: 309 PS------ATSFCAMAKRLATDTGFSVCDQALQLHGGYGYTSDYPVERLLRDLRVHRILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 363 GTNEIMRVIIGRRL 376


>gi|299768808|ref|YP_003730834.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698896|gb|ADI89461.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 600

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 89/485 (18%), Positives = 167/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   A    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQALPNSLGIAISEMVGTANWSWGMYPGLSHGAVRTLEHHGSDEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I S+ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFHVNADGTVGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKDADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++  + +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRISCLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  K    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLKDFTKIVHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|242778135|ref|XP_002479178.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722797|gb|EED22215.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 438

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 139/384 (36%), Gaps = 36/384 (9%)

Query: 85  HAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+ E   PA   ++ +    GL        +          I A      
Sbjct: 77  EQIGPKVRDMDEAEAMDPA---VVEQLFEQGLMGIEIPEEYGGSGMNFTSAIIAIEELAR 133

Query: 144 AQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  L+    T  +   +   +    + W P++ S                     L
Sbjct: 134 VDPSVSVLVDVHNTLVNTAVMTYGSAETQRRWLPQLASG--------------TVGSFCL 179

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A ++   G   +   +
Sbjct: 180 SEPASGSDAFALQTKAEKTADGYKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFI 239

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G    + + K+G R+++T  L F +     +   N+     +  KI I  L+  
Sbjct: 240 VEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKANLLGEEGKGYKIAIGILNEG 296

Query: 322 IMSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            + ++     LA              R   G ++ +   M+  IA    +IAAA AL + 
Sbjct: 297 RIGIAAQMTGLAIGAWENAAGYVWNDRKQFGQLIGNFQGMQHQIAQAYTEIAAARALVYN 356

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  ++   +AA A       K +  ++A  V   A+E +GG G++ E    + +R
Sbjct: 357 AARKKEAGQNFVMDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFR 409

Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459
           +S   +I  G+ N  +  +   L+
Sbjct: 410 DSKIGAIYEGTSNIQLTTIAKQLQ 433


>gi|299532697|ref|ZP_07046085.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298719332|gb|EFI60301.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 598

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 86/454 (18%), Positives = 162/454 (35%), Gaps = 64/454 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + I  G      D  +          + +A   ++        M P 
Sbjct: 74  EVTTPKGFKQAYAQFIEGGWPALSCDPEYGGQGLP--FVLNSALYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    TP   K +  K+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ + ++DG Y ++G+K F+S+   D       ++LA++         +  F+VP+  
Sbjct: 179 LRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVVPKFK 238

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    L++K+G   NAT ++      G L+G+ N     +  M     
Sbjct: 239 VKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGLQAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P ++R +      
Sbjct: 299 LGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVRRMLLTAKAY 358

Query: 366 IAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                ALS       D      + K R +      ++ PI K +           + +  
Sbjct: 359 AEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWTATTLSQQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG G+I+E  + +  R++  N I  G+     LD+L     G               G++
Sbjct: 419 GGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQ-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
            KK   ++   +     ++ ++ F+T    L   
Sbjct: 466 LKKFGKLIAQLVEEEGVNEKMSEFITPIAMLGEQ 499


>gi|325675476|ref|ZP_08155160.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553447|gb|EGD23125.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 380

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 118/350 (33%), Gaps = 24/350 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +   F    +     ++                S    S   +A   T    
Sbjct: 50  RAGLLSLPYPEEFGGGAQPYEVYLQVLEEIAARWAAVAVATSVHSLSCFALATHGTDEQK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P +   E                   L+E + G+D AA++ +  ++  G       
Sbjct: 110 SKWLPDMLGGE-------------TIGAYSLSEPQAGSDAAALSCRATEVDGGFRINGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D + + A+     G   +   L      GL + + + K+G R+  T    +
Sbjct: 157 AWITNGGRADFYTLFARTSDD-GARGISCFLVPKDTEGLNFGKPEEKMGLRAVPTTAAHY 215

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            + F     L+G                 L  A ++V   + +L +A+ YA+ R   G  
Sbjct: 216 DDAFVPAERLIGKTGQGLPIAFSALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKR 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +ID   +   +AD+A  + +A A     A   D     S         A + K      A
Sbjct: 276 IIDHQGLGFVLADMAAAVDSARATYIDAARRRDAGLPYSR-------NASVAKLVATDAA 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++  GG GY ++  + R+ RE+    I  G+     L +   L
Sbjct: 329 MKVTTDAVQVFGGYGYTQDFPVERYMREAKITQIFEGTNQIQRLVIARQL 378


>gi|294140054|ref|YP_003556032.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12]
 gi|293326523|dbj|BAJ01254.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12]
          Length = 389

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 133/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +    +   AH +    +   +        + S    + + 
Sbjct: 47  ELWPVLGDMGLLGVTVSEEYGGADMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ + E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNAEQKAKYLPKLVTGEH-------------VGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + D    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAQTYVIYAKTDLDKGAHGITAFIVDRDSKGFSTAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F +         N+  G    +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFQDCEVPA---ENILGGLNNGIKVLMSGLDYERVVLSGGPLGIMNACMDIVIP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YVHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|302530491|ref|ZP_07282833.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302439386|gb|EFL11202.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 130/364 (35%), Gaps = 30/364 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL    +   +    +     ++A      A +  G  +S    S   +A
Sbjct: 42  RDLFTLMGKSGLLGLPYPERWGGAEQPYEVYLQALEEIAAAWMSVGVGLSVHTMSCYALA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P +                S+     L+E   G+D AA++++ +   D
Sbjct: 102 NYGTEEQQDRWLPDMLGG-------------SLLGAYALSETHAGSDAAALSTRARLSED 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   + ++D +  + +     G   +  LL D S  GL     + K+G   
Sbjct: 149 EYVVNGTKAWITHAGVADFYTTMVRTSDDGGH-GISCLLVDSSTPGLSAAPRERKMGLTG 207

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIH 337
           + T +L F +          +  G    +KI +       L  A  +V   + +L EA+ 
Sbjct: 208 SPTAQLLFEDARVPAD---RLIGGKGSGLKIALASLSSGRLGIAACAVGLAQAALDEAVE 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  ++D   M+  +AD+A  + +A A     A   D       ++       
Sbjct: 265 YAKGRTQFGRPIVDFQGMEFLLADMAATVESARATYLDAARRRDRGLDFQRQS------- 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K      A  V  +A++ +GG+GY  +  + R+ RE+    I  G+     + +   
Sbjct: 318 SIAKLVATDGAMKVTTDAVQVLGGAGYTRDFPVERYMREAKVPQIFEGTNQIQRMVIARS 377

Query: 458 LEKG 461
           L+  
Sbjct: 378 LKNA 381


>gi|224371965|ref|YP_002606131.1| Acd17 [Desulfobacterium autotrophicum HRM2]
 gi|223694684|gb|ACN17967.1| Acd17 [Desulfobacterium autotrophicum HRM2]
          Length = 604

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 103/546 (18%), Positives = 195/546 (35%), Gaps = 69/546 (12%)

Query: 38  SSDSLLVALIANFP-SVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGERWD 95
             D LL  ++     +   ++     +  +     E   +A     P        G   +
Sbjct: 10  DIDFLLHEMLDTAGLAKKSEKFAEFNKKTIDLIVSEARNLAVKEILPTQKEGDEHGCVLE 69

Query: 96  --KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
             KV   P++  L              D  +          I +A +          +M 
Sbjct: 70  NGKVTTPPSFKRLYDLFNEGEWLAMTEDPEWGGQGMP--RTISSATMEYFNGANYPFMMY 127

Query: 154 PSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           P +T  +  +V    T    + +  K++S E+  T             + LTE   G+D+
Sbjct: 128 PGLTHGAGKLVEEFGTDEQKRVFLKKMYSGEWAGT-------------MLLTEPGAGSDV 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPR 260
            A+T+  ++  DG + ++G K F+S    D        +LA++EG       +  FLVP+
Sbjct: 175 GALTTTAKRNDDGTFSITGEKIFISGGEHDLTENIIHPVLARIEGAPEGTKGISLFLVPK 234

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
            L +     G  N +    +++K+G   N+T  L   +     G LLG+ N     +  M
Sbjct: 235 FLVNEDGSLGEFNDVVCTGIEHKLGIHGNSTCSLALGSNGKCVGTLLGEENKGMKAMFVM 294

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAI 359
                L       +    S   A++YA++R   G               +I  P ++R +
Sbjct: 295 MNEARLLVGFQGFACATASYMYAVNYAKQRIQ-GKNLLEMMDANAKAVPIIQHPDVRRQL 353

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIA 413
             +   +    ++ + +    D A    +EA  A+       + PI K +    A  V +
Sbjct: 354 LKMKALVEGMRSILYYVNYCADMAAIGKDEAERAKYQGLVEVLTPIAKGYVTDRAFEVCS 413

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470
           + M+  GG G+IEE  +A+  R+     I  G+     +D+L     + KG  + +    
Sbjct: 414 QGMQIYGGYGFIEEYPMAQLLRDCRITMIYEGTNGIQAMDLLGRKLGMNKGKPIMDLFGE 473

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYRAGMND 524
             +   G+     I    + I       G       + A+      A + A  ++    D
Sbjct: 474 MQKTVAGAKEIPAIQAYAEKIEKALNKLGEVAMTMGQTAMSPKVLNAFANAHPFQDAAGD 533

Query: 525 IADVFL 530
           +A  ++
Sbjct: 534 VAVAWM 539


>gi|301053873|ref|YP_003792084.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|300376042|gb|ADK04946.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 569

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L     ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLTFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|84623396|ref|YP_450768.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577295|ref|YP_001914224.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84367336|dbj|BAE68494.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521747|gb|ACD59692.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 393

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 128/381 (33%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 35  PHAAQWDAEGHFP--REAIAKAAALGFCGLYTDHGVGGLGMRRLDAAVVFEELATVDPST 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S        +A   T  V   W   + S              +      LTE   G
Sbjct: 93  SAFISIHNMVTWFIASYGTDAVRAQWGEAMTSG-------------ARLGSYCLTEPGSG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +          
Sbjct: 140 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFAVPADAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  +   N        L     G    MK L    ++ A  S+
Sbjct: 199 GISYGRKEEKMGWNSQPTRGVTLENVRIPAENLLGKEGEGFKMAMKALDGGRINIAACSL 258

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 259 GAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 318

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 319 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 372

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 373 TNEVMRMIVARHLLNGEEELR 393


>gi|54023005|ref|YP_117247.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014513|dbj|BAD55883.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 379

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 143/397 (36%), Gaps = 34/397 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  TA+E A              P    WD+ +  P    +LR++   GL       
Sbjct: 8   EKAIRDTAREFADEF---------LAPNALDWDEHKHFPV--DVLRKAGPLGLGGIYVHE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R               +S    +  M+    +P     W P + + E
Sbjct: 57  DMGGSGLRRLDAVRIFEQLATGCPSVAAYISIHNMATWMIDAYGSPEQRSRWLPGLTAME 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +     LTE   G+D AA++++  +  D  Y L+G K F+S   ++ 
Sbjct: 117 -------------LLGSYALTEPGVGSDAAALSTKAVRDGDD-YILNGAKQFISGAGAND 162

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             ++    G  G   +  L+      GL     + K+G  +  T ++   +    +   L
Sbjct: 163 VYVMMVRTGDDGARGISALIVPADTPGLSVGPNEKKMGWNAQPTRQVILEDARVPVANRL 222

Query: 303 NV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                      +      L+ A  SV G + +L + + Y  +R+  G  L+    ++  +
Sbjct: 223 GAEGDGFRIAMNGLNGGRLNIAACSVGGAQAALDKTVPYLAQRNAFGKPLLRNQALQFDL 282

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L +R A + D       E      +  + K +       V  +A++  
Sbjct: 283 ADMRTQLEAARTLLWRAAAALDADAPDKVE------LCAMAKRFATDAGFEVANKALQLH 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY+ E  + +  R+   + IL G+   M + V  
Sbjct: 337 GGYGYLAEYGLEKIVRDLRVHQILEGTNEIMRVVVAR 373


>gi|118101892|ref|XP_417879.2| PREDICTED: similar to MGC64378 protein [Gallus gallus]
          Length = 472

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 119 PRMAEWDEKEIFPV--ETMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTST 176

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS     A M+           + P + S E                   LTE   G
Sbjct: 177 TAYMSIHNMCAWMIDTFGNEEQRHRFCPSLCSME-------------KFASYCLTEPGSG 223

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  ++ +   
Sbjct: 224 SDAASLLTSAKRKGD-TYVLNGSKAFISGGGDTDVYVVMCRT-GGPGPKGISCVVLEKGT 281

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   L     G    MK      ++ A  S
Sbjct: 282 PGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVGNRLGAEGQGFNIAMKGLNGGRINIASCS 341

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L     ++  +A++A  + AA  +    A +  E +
Sbjct: 342 LGAAHASVLLAQEHLTVRKQFGEPLASNQYLQFRLAEMATRLVAARLVVRNAARALQEGR 401

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A ++  + K +      A+  +A++  GG GY+++ ++ +  R+   + IL 
Sbjct: 402 ED------AAVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILE 455

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+   M + V   L +G
Sbjct: 456 GTNEVMRMIVARNLLQG 472


>gi|319761394|ref|YP_004125331.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115955|gb|ADU98443.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 598

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 89/483 (18%), Positives = 173/483 (35%), Gaps = 69/483 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KVEFHPAWHALLRRSIHDGLHC 117
              ++   +E  + A   T  L+      G   D    +V     +     + +  G   
Sbjct: 36  ADTINAVLEEAGKFAAEVTFPLNVSGDTEGCTLDQQTHEVTTPKGFKEAYAKYVEGGWAA 95

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175
              D  +        H +      ++        M P ++  +  AL    T    K + 
Sbjct: 96  LSCDPEYGGQGLP--HVVNQCLYEMLNSANQAWTMYPGLSHGAYEALLAHGTDAQKKTYL 153

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +  +DG Y ++G+K F+
Sbjct: 154 PKLVSGEWTGT-------------MCLTEPHCGTDLGLLRTKAEPQADGTYRITGNKIFI 200

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       ++LA++         +  F+VP+   +     G+ N +    L++K+
Sbjct: 201 SAGEHDVAANIVHLVLARLPDAPKGSKGISLFVVPKFHVNADGSLGARNPIYCTGLEHKM 260

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT ++      G ++G+ N     +  M     L     S+    V+   A+ YA
Sbjct: 261 GIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMMNAARLGVGNQSLGLTEVAFQNALAYA 320

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P +++ +         A AL        D+A    
Sbjct: 321 KDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAEGARALQIYCTLLLDKAHHHP 380

Query: 388 EE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +E           ++ PI K +            M+  GG G+I+E  + +  R++  N 
Sbjct: 381 DEKERKGCDELVALLTPIVKAFITDNGHIATNACMQVFGGHGFIKEWGMEQFVRDNRINM 440

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD+L     G               G++ KK+  ++   ++    ++ +A
Sbjct: 441 IYEGTNTVQSLDLLGRKVLGNQ-------------GATLKKLGKLIGQLVAEEGVNEKMA 487

Query: 502 RFL 504
            F+
Sbjct: 488 EFI 490


>gi|120613001|ref|YP_972679.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120591465|gb|ABM34905.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 376

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 136/395 (34%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A     Q   + P   RWDK    P      R     G +       +    
Sbjct: 5   QDQEMIRDAVREFAQTELW-PHAARWDKEHLFP--RDAHRGLAALGAYGICVPEEYGGAG 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                                  +S +    + + +   +    + W             
Sbjct: 62  LDYLSLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGSEAQKRRWLE----------- 110

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIML 246
             P+ +  +     LTE   G+D +A+ +   +  D  Y + G K F++S  +    I++
Sbjct: 111 --PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVI 167

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLN 303
           A  +   G   +   L      G    RL++K+G RS+ T ++ F      +   +G   
Sbjct: 168 AVTDRAAGKRGMSAFLVPTDTPGYVVARLEDKLGQRSSDTAQIMFEGCRIPVENRIGAEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         +  A  SV   R +   A+ YA+ R   G  +     +   +AD A
Sbjct: 228 EGYKIALGALEGGRIGIAAQSVGMARSAFDVAVQYAKERESFGQPIFQHQAVGFRLADCA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA  L +  A   D  +   +EAA A       K +  +MA  V + A++ +G  G
Sbjct: 288 TQLEAARQLIWHAATLRDAGRPCLKEAAMA-------KLFASEMAERVCSAAIQTLGWYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + +  + R YR+     I  G+ +   + +   L
Sbjct: 341 VVNDFPVERIYRDVRVCQIYEGTSDVQKILITRAL 375


>gi|229102936|ref|ZP_04233628.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
 gi|228680481|gb|EEL34666.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28]
          Length = 569

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEKHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEDTEVEIDIATVERNHRYILLAKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|116332160|ref|YP_801878.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125849|gb|ABJ77120.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 570

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 88/430 (20%), Positives = 171/430 (39%), Gaps = 47/430 (10%)

Query: 74  ARMA-NYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             +A N  +P +      G ++   KVEF P    L+ + I  G+    + R +  +   
Sbjct: 60  GDLAGNILSPHVAKLDREGLKFKEGKVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIP 119

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              K   + ++         +    V  A ++    T  + ++W PK+ + ++       
Sbjct: 120 WTVKSFISEIFYRVDTSL-AIAIGCVNLAEILEHHATREMKEEWIPKLAAGKF------- 171

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIM 245
                    +GLTE   G+D++ + ++  K  +G + L+G K F++            + 
Sbjct: 172 ------VCAMGLTEPDHGSDLSNLRTKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLT 225

Query: 246 LAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           LA+      G   +   L       +    ++ K+G   + T E+ F N+ G L+G+  +
Sbjct: 226 LARSGKIGSGARGLSLFLV--QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGEEGL 283

Query: 305 ST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                   M     +  A  S      +  EA+ Y + R   G  LI+ P +K+ I  I 
Sbjct: 284 GLVKYTMGMLNGARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIE 343

Query: 364 LDIAAATALS-----------FRLANSFDEAKSRSEE---------AAYARIMAPITKYW 403
            ++ A   L+           +R      +  +  E             A I+ PI+K++
Sbjct: 344 REMYAMRCLTLEGSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFY 403

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-T 462
           C +    V+++A++  GGSGY E+  I+R YR++   +I  G+    +   +  +  G T
Sbjct: 404 CSETCLKVVSDALQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQINACIGGITSGLT 463

Query: 463 NLFEQLFSTL 472
           + F +  S L
Sbjct: 464 HSFGEYVSEL 473


>gi|256043141|ref|ZP_05446083.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|260564362|ref|ZP_05834847.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265989572|ref|ZP_06102129.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260152005|gb|EEW87098.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263000241|gb|EEZ12931.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 380

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 133/359 (37%), Gaps = 32/359 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 46  ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LT+   G+    + +   +  D  Y L+G
Sbjct: 106 KRNYLPRLASGE-------------LLSSFCLTKPDAGS----LKTTAVRDGD-FYILNG 147

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T  
Sbjct: 148 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSN 207

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 208 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 267

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 268 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 320

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 321 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 379


>gi|312382268|gb|EFR27784.1| hypothetical protein AND_05110 [Anopheles darlingi]
          Length = 1159

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 91/469 (19%), Positives = 174/469 (37%), Gaps = 51/469 (10%)

Query: 105  ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            A  +     GL        +  +        R   L     L  A    +        V 
Sbjct: 636  ATWKIMWEMGLLGIQGPEEYGGLALPNTGYARMGELIGAVDLGLAVVFGAHQSIGWKGVL 695

Query: 164  LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            L  T    K + P++ +                     LTE   G+D  +I S+  K +D
Sbjct: 696  LYGTEEQKKKYLPQVVTG-------------GTLAAFCLTEPSSGSDAGSIRSKAVKSAD 742

Query: 224  GI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQRLK 276
            G  Y L+G K ++S    +D   + AQ    + + G     V   + +    G+     +
Sbjct: 743  GTHYVLNGSKIWISGGGLADILTVFAQTEVTDPKTGQKKDKVTAFIVERGFGGVSNGPPE 802

Query: 277  NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRV 330
            NK+G + + T E+ F +    +    NV     +  K+ +  L++    +SG     M  
Sbjct: 803  NKMGIKCSNTAEVYFDDVKIPV---ENVLGKEGDGFKVAMNILNNGRFGMSGTLAGTMAH 859

Query: 331  SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
             + +A  +A  R   G  + +   ++  +A +A+    + ++ + +AN+ D         
Sbjct: 860  CIQKAAEHATTRVQFGQKIANFGNVQEKLARMAMRQYVSQSMGYMIANNMDAGHKD---- 915

Query: 391  AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + A I+K +  ++A  V  EA++ +GG+G++    + +  R+     I  G+ + +
Sbjct: 916  --YHLEAAISKVFASEVAWYVCDEAIQILGGNGFMSASGLEKFLRDIRIYRIFEGANDIL 973

Query: 451  VLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGLARFL 504
             L V    +   G++L   ++ F     +LG   K+       SI     D    +A  L
Sbjct: 974  RLFVALTGIQYAGSHLKELQRAFKNPTANLGLIFKEGSRRAVRSIGYGGTDLSSFVAEPL 1033

Query: 505  TEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             E  AL + +         A L + G   +   +L  R  D+    + M
Sbjct: 1034 KESAALCADSIDRFSRSIEALLIKHGKGIVDQQYLLIRLADSAIDIYAM 1082



 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 79/463 (17%), Positives = 171/463 (36%), Gaps = 53/463 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRV 170
             G   +     +  +    A  +R + +     L    +  +        + L      
Sbjct: 64  EGGFLGAFVPTEYGGLGLSNAQSVRLSEINGSYDLGLTIYTGAHQTIGTKGILLYGNEAQ 123

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            K + P++ S               V     LTE   G+D A++ ++      G  Y L+
Sbjct: 124 KKKYLPQLSSG-------------RVFGAFALTEPGTGSDAASVKTKAVLSPCGKYYILN 170

Query: 230 GHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G K ++S   +++ F   AQ E      G     +    + + +  G+     ++K+G +
Sbjct: 171 GSKLWISGGGIANIFTTFAQTEFVDPQTGEKKTKM-SAFIVERAFEGVSTGPPEDKMGIK 229

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEAI 336
            + T E+ F +    +    N+     +  KI +  L+S    +  M     R  + +A 
Sbjct: 230 CSVTTEVFFDDAKVPV---ENLLGELGQGFKIAVNILNSGRFGLGAMLSGTMRTCVEKAA 286

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +   R      LI+   ++  +A +      A ++++ +A + D+            + 
Sbjct: 287 DHVTNRVQFKRKLIEFENVQEKLALMTTHQYVAQSITYMVAGNMDKGSVD------FHLE 340

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-L 455
           A ++K +C + A  V  EA++ +GG+G+++   + R  R+     I  G+ + + + + L
Sbjct: 341 AAVSKVFCTEAAWYVCDEAIQLLGGNGFMKSSGLERFLRDMRIFRIFEGANDVLRMFIAL 400

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS------------LCKEDKGLARF 503
             ++   N   QL   L+  L + G  +    + +              +  E +  A+ 
Sbjct: 401 TGIQAAGNELRQLQKVLKNPLSNLGVVLAEGSKRAGRSVGLGGTDLSPFVVSELQTAAKQ 460

Query: 504 LTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +E + L S    + L + G   +   F   R  D+    + M
Sbjct: 461 CSECVDLFSKTIESLLVKHGKGIVERQFQLARVADSVIDIYTM 503


>gi|297528853|ref|YP_003670128.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297252105|gb|ADI25551.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 594

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 90/446 (20%), Positives = 165/446 (36%), Gaps = 60/446 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +      A     A   A    +     +  + L
Sbjct: 66  KLLRKAGELGLLSADIPEEYGGLGLDKVSSAIIAEKMAPAGGFAISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQKYLPYLATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  +S  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNSGFADVFVVYAKVDGEH----FTAFIVERDFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENVLGEIGKGHVIAFNILNIGRYKLGLGAVGGAKRALEITLKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + AA +  +R    FDE             K  +
Sbjct: 289 NQRQQFKRPISQFTLTQEKFATMASRLYAAESSVYRTVGLFDERMGLLDAEKAKDGKEVA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  ++   ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATEVLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L L +K   L E+L     ++ GS              + +
Sbjct: 409 EINRLLVPGMYLKKALKGELPLFQKAQQLQEELMMMAAEEPGS-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAG 521
           ++K L R   +KIAL  +  A  + G
Sbjct: 456 QEKYLVRN-AKKIALMVAGLAAQKYG 480


>gi|328544858|ref|YP_004304967.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414600|gb|ADZ71663.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 598

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 100/503 (19%), Positives = 178/503 (35%), Gaps = 58/503 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKV 97
           LL  ++                 V+    +E A+        L+      G       +V
Sbjct: 14  LLRDVLGFDRYSDLPGFADASPDVVEAILREGAKFCEEVVQPLNQGGDREGCTRHDDGRV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G      D           H +       ++       M P +T
Sbjct: 74  TTPTGFKAAYEAFCQGGWGGLSADPDHGGQGLP--HTLATIFNEYVSSANMAFAMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           + ++ AL    T  +   + P + +  +  T             + LTE   GTD+  I 
Sbjct: 132 AGAVAALTLHGTDALKAKYLPNMIAGTWTGT-------------MNLTEPHCGTDLGLIR 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++    +DG Y ++G K F+S+   D       ++LA++EG       +  F+VP+ L  
Sbjct: 179 TRAVSQADGSYRITGTKIFISAGDHDLSENIIHLVLARIEGAPEGTKGISLFVVPKRLVG 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G+ NG+    +++K+G   NAT  + +    G+L+G+ N     +  M     L 
Sbjct: 239 DDGSLGAANGVSCGSIEHKMGIHGNATCVMNYDGATGWLVGEENKGLRAMFTMMNEARLG 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
            A+  ++   V+   A+ YAR R                  +I  P ++R +  I     
Sbjct: 299 VAVQGLAQSEVAYQNAVAYARDRLQGRALSGPKAPDKAADPIIVHPDIRRILMQIRAFNE 358

Query: 368 AATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL         +A   D+AK+R++      +M P+ K        A    A +  GG
Sbjct: 359 AARALVLWTALHGDVARRSDDAKTRAQAEDMMGLMTPVLKGVLTDTGFANAVNAQQVFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GYI E  + +  R++    I  G+     LD++   L   G       F+ +   L  +
Sbjct: 419 HGYIAEWGMEQFVRDARIAMIYEGANGIQALDLVGRKLPANGGRAVMTFFNEVGGFLQEN 478

Query: 480 G-KKVITILRDSISLCKEDKGLA 501
           G  + +      +    E    A
Sbjct: 479 GSDEALAAFTGPLKTGLEHLQQA 501


>gi|47227421|emb|CAF96970.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 574

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 91/485 (18%), Positives = 180/485 (37%), Gaps = 56/485 (11%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+    P     ++     GL   +    +  +        R A +  +    A  L 
Sbjct: 60  RIDREASIP--PETMKGLKELGLFGIMVPEEYGGLGLSNTMYARLAEITSLDGSIAVTLA 117

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        + +       + + PK+ S E+                  LTE   G+D+A
Sbjct: 118 AHQAIGLKGILIAGNETQKQKYLPKLASGEH-------------VAAFCLTEPGSGSDVA 164

Query: 213 AITSQGQKISDGIY-CLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSP 267
           ++T++     DG    L+G K ++S+   +D   + A+ E          V   + + + 
Sbjct: 165 SMTTRATLSEDGRRFLLNGSKIWISNGATADIMTVFAKTEVVVDGTKKDKVTAFIVERAF 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVS 326
            G+   R ++K+G R + T E+ F N    +   +  V  G    M I   L+S   S+ 
Sbjct: 225 GGVVSGRPEDKLGIRGSNTCEVTFDNVPVPVENVIGEVGGGFKIAMNI---LNSGRFSMG 281

Query: 327 ----------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                        VS      YA  R   G  L +  +++   A +AL+     ++++  
Sbjct: 282 SSASGMIKKLMALVSAEWTSEYAATRKQFGKSLSEFGLIQEKFAVMALNAFVMESMAYLT 341

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +    + +     A + K +  + +   ++EA++ +GG GY +     R+ R+
Sbjct: 342 AGMMD--RPGIPDCSL---EAAMVKVFSSEGSWVCVSEALQVLGGVGYTKNYPYERYLRD 396

Query: 437 SPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-----DLGSSGKKVITILRDS 490
                I  G+   + + V L  ++    +       +++      LG +G+K+ + L  S
Sbjct: 397 CRILPIFEGTNEVLRMYVALTGIQHAGKVLTGRIKEMKRGNVGLALGMAGRKIRSSLGAS 456

Query: 491 ISLCKEDK---------GLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCH 539
           + L    K           A+ L E ++L  S   + LYR G   + +  +  +  D   
Sbjct: 457 VDLGLTGKDGAVHPSLTESAKKLEENVSLFGSTVESLLYRYGKTIVDEQLMLKKVADVLI 516

Query: 540 STHCM 544
             + M
Sbjct: 517 HLYAM 521


>gi|254514139|ref|ZP_05126200.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676382|gb|EED32747.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 382

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 140/401 (34%), Gaps = 31/401 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            V S        MA     Q     P  E W++    P            GL C   D +
Sbjct: 4   DVGSDEMTLFRDMARRAFEQ--EITPHFEAWEEDHLVP--REFWNTMGAAGLLCPDVDEA 59

Query: 124 FEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           +          +        +     A      S   A  ++   +    + W PK+ S 
Sbjct: 60  YGGAGTVPHVTLMLIEELSRMGFGGIATGYGIHSNIVAPYISRHGSDEQKQQWLPKMVSG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                 L +TE   G+D+  I +   +  D  + L+G K F+++ +  
Sbjct: 120 E-------------AFGALAMTEPGAGSDVQGIRTSAVRDGDE-WILNGSKIFITNGIHA 165

Query: 242 AFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
             +++A   +   G       L D +  G    R   KIG  ++ T +L F +       
Sbjct: 166 DIVVVAAITDPGKGAKGTSLFLVDTTLEGFEKSRKIEKIGQHTSDTAQLFFQDVRLPANA 225

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG+ N     + +      L  A  +V     +L   + Y + R   G  + +    + 
Sbjct: 226 LLGEENRGFVIMMEELPRERLGIAAQAVGAAEGALDITVDYVKERKAFGQSIGEFQNTRF 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   I    AL  + A+ + +    +++AA  ++         C+M  + I + ++
Sbjct: 286 KLADVKTQIGLNRALYEQCADEYAQGTLTADKAAMLKLA-------SCEMQCSTIDDCLQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY  E  I+R Y ++    I  GS   M   V   +
Sbjct: 339 LFGGYGYTVEYPISRFYTDARIQRIYGGSSEIMRELVARTM 379


>gi|169796334|ref|YP_001714127.1| putative Acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184157731|ref|YP_001846070.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213156930|ref|YP_002318975.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215483795|ref|YP_002326020.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii
           AB307-0294]
 gi|301347073|ref|ZP_07227814.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511209|ref|ZP_07236446.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595039|ref|ZP_07240047.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332852010|ref|ZP_08433877.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332871763|ref|ZP_08440203.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332876414|ref|ZP_08444183.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
 gi|169149261|emb|CAM87144.1| conserved hypothetical protein; putative Acyl-CoA dehydrogenase
           [Acinetobacter baumannii AYE]
 gi|183209325|gb|ACC56723.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193077045|gb|ABO11804.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
 gi|213056090|gb|ACJ40992.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988222|gb|ACJ58521.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii
           AB307-0294]
 gi|322508038|gb|ADX03492.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323517624|gb|ADX92005.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729587|gb|EGJ60925.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150]
 gi|332731233|gb|EGJ62531.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113]
 gi|332735424|gb|EGJ66482.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059]
          Length = 390

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGVKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|126731871|ref|ZP_01747675.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707698|gb|EBA06760.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 380

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 135/375 (36%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLE 147
           P   R D+ +  P  + L       GL        +           I    L   +   
Sbjct: 23  PIASRIDETDEFP--YELAELFGELGLLSLWVPEEYGGAGGDLTTVCIAKEELGRASLTA 80

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S+     V  M T    + + P                   V   +G+TE   
Sbjct: 81  SALAANNSIGLILPVLHMGTEEQKQKYLP-------------ISASGKVITAIGMTEPGT 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ ++ +  ++  +  Y ++G K W     ++D  ++ A+         +   L D  
Sbjct: 128 GSDVRSMKTFAKRQGNDSYVINGQKSWITWGGVADYVLVFAKTSEGTSSDSISAFLVDTK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    R + K+G       EL F +        L    TG    MKIL       A  
Sbjct: 188 TPGFRVGRKERKMGRNGAPNHELFFEDMVVPADCMLGEEGTGFKGCMKILDLNRPTVAGS 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + +L  A+ +A+ R   G  +     M+   AD+ +   AA AL + +    D  
Sbjct: 248 SLGLAQGALDTALAFAKERVQFGRAVSQFQGMQFKFADMHMKTEAARALLYSVCAEIDSG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                + +   ++  ++K +   +A  V  EA++ +G +GY +E  + R  R++  N IL
Sbjct: 308 -----DHSRLAMLGAVSKCYVTDVAMEVTTEAVQAMGSAGYSKEYPVERMMRDAKLNQIL 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNEIQRMIIGRNL 377


>gi|187922622|ref|YP_001894264.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713816|gb|ACD15040.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 387

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 142/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D  + +PA   ++ +    GL   I D  +  +        +         +  
Sbjct: 29  PYVHKFDHDDIYPA--EIVEKMKEMGLFGCIIDPEYGGLGLSTRTYAQIIARISRVWMSV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++  +  A +V    TP     + PK  + E+               G+GLTE   G
Sbjct: 87  SGIINSHLILAMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           TD+ AI +  +++ D         W  +S   +   +L + +   +     +  LL    
Sbjct: 134 TDLQAIRTTAKRVGDEYIVNGNKTWITNSKHGNTLALLVKTDTTAQPRHLGMSLLLVQKG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           P G    R   K+G +   T EL F +    T   + G        +     L  ++ A 
Sbjct: 194 P-GFEVSRQLEKLGYKGIDTCELSFHDYHVSTDALIGGVEGRGLQQILGGLELGRINVAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   + +L E++ Y+++R   G  + +   ++  + ++A  + A   L    A  +D 
Sbjct: 253 RGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAKKYDR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       KY+  + A     EAM   G  GY +E ++ R YR++P  +I
Sbjct: 313 GERCDMEAGMA-------KYFATEAALENSVEAMRIHGAYGYSKEYNVERLYRDAPLLTI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTNEMQRIIIAKQL 381


>gi|104781960|ref|YP_608458.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95110947|emb|CAK15665.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 383

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 140/378 (37%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+KV     W    ++R+    GL   +    F            A         
Sbjct: 27  PHAQAWEKV----GWIDDEVVRKMGELGLLGMVAPEQFGGSYTDYVAYALAVEEISAGDG 82

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +      L   TP   + W P++ + E             V     LTE 
Sbjct: 83  AIGALMSIHNSVGCGPLLAYGTPEQQQAWLPRLATGE-------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAKLAIVFAVTDPELGKKGLSAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSA 321
               G    R ++K+G R++ T  +   N        L     G    +  L    +  A
Sbjct: 189 TDNPGFKVDRSEHKMGIRASDTCAVTLDNCRIPAANLLGERGKGLAIALSNLEGGRIGIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R +   A+ Y+R R   G  + +   +   +AD+ + I AA  L    A    
Sbjct: 249 AQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQINAARLLILHAARLRT 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K    E       A   K +  +MA  V + A++  GG GY+E+  + ++YR++    
Sbjct: 309 AGKPCLSE-------ASQAKLFASEMAERVCSMAIQVHGGYGYLEDYPVEKYYRDARITQ 361

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  GS     + +   L+
Sbjct: 362 IYEGSSEIQRMLIARELK 379


>gi|149376829|ref|ZP_01894585.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358836|gb|EDM47304.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 379

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 138/376 (36%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P    L + +   GL    +  S   +         A    LM     
Sbjct: 26  PYIDDWEEAGEFP--RELYKTAGEAGLLGVGFPESLGGIGEGDIFMKVAVSEELMRSTSG 83

Query: 149 GHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G +         +  VA      V +   P +   E                 L +TE  
Sbjct: 84  GLVAGLGSLDIGLPPVAKWAQQDVKEAIVPSVLRGE-------------KIAALAVTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+A I ++  +  D  Y ++G K F++S M      +A   G  G   +  LL D  
Sbjct: 131 GGSDVANIKTRAVRDGDD-YIVNGSKTFITSGMRADHYTVAVRTGGEGHGGISLLLIDRD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G  ++ T EL F +       L+G  N     +    +   L  +IM
Sbjct: 190 MPGFSTGKKLKKMGWWASDTAELFFEDCRVPANRLIGAENAGFIAIMSNFLFERLSLSIM 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +     ++L  ++ +A +R   G  +    V +  + D+A  +  A   ++R A      
Sbjct: 250 AYMTAEIALEASMAWAGQREAFGRPVNKFQVTRHKLVDMATQVDVAREYTYRCAALMQAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+  ++ A A       K +   +   V  EA++  GG GY+ E  + R YR+    SI 
Sbjct: 310 KNPIKQVAMA-------KNFAVDVCEKVTREAVQIHGGMGYMRESVVERLYRDGKILSIG 362

Query: 444 LGSGNAMVLDVLNLLE 459
            G+   M   +   + 
Sbjct: 363 GGTDEIMKELIAKQMR 378


>gi|17987804|ref|NP_540438.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225851948|ref|YP_002732181.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|256044131|ref|ZP_05447038.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256112935|ref|ZP_05453843.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256264542|ref|ZP_05467074.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563488|ref|ZP_05833974.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990542|ref|ZP_06103099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265994371|ref|ZP_06106928.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|17983530|gb|AAL52702.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225640313|gb|ACO00227.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC
           23457]
 gi|260153504|gb|EEW88596.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262765484|gb|EEZ11273.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001326|gb|EEZ13901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263094875|gb|EEZ18613.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408445|gb|ADZ65510.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis M28]
 gi|326538161|gb|ADZ86376.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis M5-90]
          Length = 592

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|311693899|gb|ADP96772.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 383

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 134/375 (35%), Gaps = 29/375 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  E W+K    P    L     + G+ C      +  +       +            
Sbjct: 26  TPHYEAWEKSGLVP--RELWNTLGNAGMLCVDVPEEWGGIGAPFQFSVVVGEELARMGFG 83

Query: 148 AGH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           A    +M  S   A  ++ M      + W PK+ S E                 + +TE 
Sbjct: 84  ALSTNVMVHSDIVAPYLSHMGNEEQRQQWLPKLVSGE-------------AVGAIAMTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ AI +   K  D  Y L+G K F+++   +D  I+ A+ + + G   +   L D
Sbjct: 131 GAGSDLQAIRTSAVKDGDE-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVD 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            S  G    R  +KIG  S  T EL FS+        L     G V  MK L    L   
Sbjct: 190 TSLPGFSKGRNLDKIGQHSGDTSELFFSDMRIPASALLGEEGQGFVYLMKELPRERLVIG 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + V+  R SL   I YA+ R + G  L      +  IA +  D     A   +  + +D
Sbjct: 250 ALGVAAARGSLDLTIAYAQERELFGQKLAQLQNTRFEIARMETDYRVNKAFVDQCIDQYD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +            A + KY   +M   V    ++  GG GY  E  I+R + ++    
Sbjct: 310 LGE-------LDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTTEYPISRAFIDARVQR 362

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M   +  
Sbjct: 363 IYGGTSEVMKEIIAR 377


>gi|295687526|ref|YP_003591219.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429429|gb|ADG08601.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 387

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 129/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL        +        H++          ++       +      + 
Sbjct: 48  RDMWTKAGEAGLLGLSTPEQYGGAGGDYRHEVVLMEQLGKKGVDGFGASLHNAIVMPYIV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P++ + E             +   + +TE   G+D+  I +  +K  +
Sbjct: 108 HYGTEEQKRRWLPRMATGE-------------LVSAIAMTEPGAGSDLQGIKTTAKKAGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++  +   I ++A+ +   G        +E     G    R  +K+G 
Sbjct: 155 -QYVLNGSKTFITNGQTANLICVVAKTDPAGGARGTSLIFVETDGAEGFERGRNLDKLGQ 213

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F++        L      G  + M  L    L+ A+  ++ +  +L   I 
Sbjct: 214 EAQDTSELFFNDVKVPTENLLGTDEGQGFFQLMSQLPQERLNIAVQGMATIERALELTIA 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  ++D    +  +A+   +   A            E K  +  A+ A    
Sbjct: 274 YVKDRKAFGKAILDFQNTQFVLAECKTEATVAKVFVNHCIGQHLEGKLDAATASMA---- 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW   +   ++   ++  GG G++ E  IAR Y++S    I  G+   M L +   
Sbjct: 330 ---KYWVSDLENKIVDRCLQLFGGYGFMNEYPIARMYKDSRIQRIYGGTNEIMKLLIART 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|110835600|ref|YP_694459.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648711|emb|CAL18187.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 604

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 89/490 (18%), Positives = 168/490 (34%), Gaps = 55/490 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSIW 120
            ++     E+A++       L+      G +  D V   P  +       I  G      
Sbjct: 37  DMVEAIIGEMAKLCENTIAPLYQSGDEEGCKLEDGVVTTPKGFKEAYDEFIAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                      +  +    +   A          S+ + + + +  +    +D+   +  
Sbjct: 97  PVEVGGQGLPMSLGLIKQEMMATANWSFSMYPGLSLGAMNTIQMHGSEEQKQDYLVPLTE 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + GTD+  + ++     DG Y +SG K F+SS   
Sbjct: 157 GTWGGT-------------MCLTEPQCGTDLGQVKTKADPQQDGSYKISGTKIFISSGDH 203

Query: 241 D-----AFIMLAQ-VEGRVGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATV 287
           D       I+LA+  +   G   +   +         G  NG+    L+ K+G +++AT 
Sbjct: 204 DLTENIIHIVLARLPDAPKGTKGISLFIVPKYLPGKIGEHNGVSCGSLEKKMGIKASATC 263

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---- 343
            + F    GFL+G  +     +        + +A+  V+    S   A+ YA+ R     
Sbjct: 264 VINFDEATGFLIGPEHGGLECMFTFMNSARIGTAMQGVAHAERSYQGALPYAKERKSMRA 323

Query: 344 VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--- 392
           +SG          LI    ++R +           A+ +  A   D   +   E      
Sbjct: 324 LSGKKEPDAIADSLIHHGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMEKY 383

Query: 393 ------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  +       E M+  GG GYI+E  + +  R++  +++  G+
Sbjct: 384 DHWDSELGFLTPILKGFLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGT 443

Query: 447 GNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
                LD+L    LL        +    L  D G+   +    LR       +      +
Sbjct: 444 TGIQALDLLGRKVLLSSRGKCVREFSKKLV-DFGTKNLRD-PKLRPFAWKLLKIAAEWNY 501

Query: 504 LTEKIALASS 513
           LT +I L ++
Sbjct: 502 LTTRIMLVAA 511


>gi|291522091|emb|CBK80384.1| butyryl-CoA dehydrogenase [Coprococcus catus GD/7]
          Length = 381

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 141/380 (37%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              E+ D+ E       L+      G+    +            + +    +  +++++A
Sbjct: 27  AAAEKMDEEEKMDM--DLIHEMQSLGMFGIPFSEEVGGAGLDVFNYV--LLMEELSKVDA 82

Query: 149 GHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              ++ SV     AS +    TP   + W               P+   S     GLTE 
Sbjct: 83  STSITVSVHTSLCASSIEEFATPEQKEKWL-------------RPLADGSKIGCFGLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-CFLVPRLLE 263
             G+D+A   +   K  D  Y ++G K F ++   +D F++ A  +   G    +   L 
Sbjct: 130 DAGSDVAGARTVAVKDGDE-YVINGSKIFTTNSGFADTFLVFALTDKAAGPHKGMSAFLV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
           D +  G+  Q    ++G R  +  E+ +++        L     G    MK L    +  
Sbjct: 189 DRNTPGITVQPDIKRMGIRGASNSEVVYTDVRVPASDLLGGEGKGFKIAMKALDGGRIGI 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV   + +L EAI Y + R   G  +      +  IA++   I AA  L++R A + 
Sbjct: 249 AAQSVGLAQGALDEAIAYCKERKQFGKPITAFQNTQFRIAELQARIDAARLLTWRAAVAK 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +          + A   K     +A  V   A++ +GG GY  E  + R  R+    
Sbjct: 309 DNGEPY-------NVYAAEAKLVASDVANDVCRAAVQFMGGYGYCREYGVERKLRDVKIT 361

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+   M + +   L +
Sbjct: 362 EIYEGTSEVMKMVISGSLLR 381


>gi|300705373|ref|YP_003746976.1| acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CFBP2957]
 gi|299073037|emb|CBJ44394.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CFBP2957]
          Length = 376

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + R+    G +      +                         
Sbjct: 24  PHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEALGGAGLDYLSLALILEEIAAGDGGT 81

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +    SM+         + W               P+ +  +     LTE   
Sbjct: 82  STVVSVNNCPVCSMLMAYANDAQKQQWL-------------VPLARGEMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA+ +   +  D        ++  S   +D  I++A  +   G   +   L   S 
Sbjct: 129 GSDAAALRTTATRDGDHWVLNGVKQFITSGKHADVAIVMAVTDKAAGKRGISAFLVPTST 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    RL++K+G  S+ T ++ F +      G L  + G    M  L  L+   + ++ 
Sbjct: 189 PGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG-AQGEGYRM-ALSGLEGGRIGIAA 246

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +       A+ YA+ R   G  L     ++  +A++A  I  A  + +  A+  D 
Sbjct: 247 QSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMATRIDVARQMVWHAASLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A       K    +MA  V ++A++  GG GY+ +  + R YR+     I
Sbjct: 307 GRPCLKEAAMA-------KLNASEMAEHVCSDAIQVFGGYGYVSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   + +   L
Sbjct: 360 YEGTSDIQKILIARAL 375


>gi|119718281|ref|YP_925246.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538942|gb|ABL83559.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 124/376 (32%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P         +    H       +          +        A   +
Sbjct: 30  PFAADVDEHARYP--REAAEALLAADFHAPHIPEQYGGAGADALATVIIIEGVARACASS 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L  +  +   +                + +        L+E   G
Sbjct: 88  SLIPAVNKLGSLPIQLAGSEELKAKYL-------------GALARGEGGFSYCLSEPDAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + ++  +  D        +W  ++  S+ + ++A  +       +   + + S  
Sbjct: 135 SDAVGMKARAVRDGDTWVLNGVKRWITNAGESEYYTVMAVTDPEKRSRGISAFVVEKSDE 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   N        +     G    M+ L    +  A  +V
Sbjct: 195 GVSFGAPEKKLGIKGSPTREVYLDNVRIGADRMIGAEGAGFEIAMRTLDHTRVTIAAQAV 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YA+ R   G  + D   ++  +AD+ + + AA  L++  A   +   S
Sbjct: 255 GIAQGALDYALGYAQERKQFGKPISDFQGLQFLLADMGMKVEAARQLTYAAAGKSERGDS 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K +   +A  V   A++ +GG GY  +  + R  R++    I  G
Sbjct: 315 D------LTFFGAAAKCFASDVAMEVTTNAVQVLGGYGYTRDYPVERMMRDAKITQIYEG 368

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L  G
Sbjct: 369 TNQVQRIVMARQLLAG 384


>gi|254482934|ref|ZP_05096170.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036806|gb|EEB77477.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 610

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 88/481 (18%), Positives = 171/481 (35%), Gaps = 51/481 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +++  A+E A+ A      L+      G  W +  V     +    ++ I +G      
Sbjct: 51  DLMNAIAEEGAKFAEGVLAPLYQSGDQEGCTWSEEGVATPTGFKEAYQQYIDNGWPSLSA 110

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D             I    +   A    G     S  +   +    +P   + +  ++ S
Sbjct: 111 DVEAGGQGMPNLLGIINTEMVGTANWAWGMYPGLSHGAIKTIEEHGSPEQKEKYLTRLVS 170

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + S+ +  +DG Y ++G K F+S+   
Sbjct: 171 GEWTGT-------------MCLTESHCGSDLGLLRSKAEPQADGSYAITGQKIFISAGEH 217

Query: 241 DA-----FIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA+  +   G   +   +            G  N +    +++K+G   N
Sbjct: 218 DMTDNIIHIVLARLPDAPEGTKGISLFIVPKVNVSEDGTLGELNAVHCASIEHKMGIHGN 277

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  L F     +L+G+ N     +        + +A   ++ M +S   A+ YA+ R  
Sbjct: 278 ATAVLNFDGAKAYLIGEENRGLNCMFTFMNTARVGTAAQGLAHMELSFQGALAYAKDRLA 337

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                           +I  P ++R +         + A  + LA   D     +EE A 
Sbjct: 338 MRSLTGPKNPDGPADPIIVHPDVRRMLLTQKAFAEGSRAFLYFLAMQGDIVDKGTEEEAK 397

Query: 393 ARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           A       + PI K +  +         ++  GG G+I+E  + +  R+     +  G+ 
Sbjct: 398 AADDLMSLLTPIAKAFMTETGYEAANHGVQIFGGHGFIQEWGMEQIVRDCRIAMLYEGTT 457

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               LD++   +L  G  L     + +E+ +    ++    L    +   E  GL+  + 
Sbjct: 458 GIQALDLIGRKVLGSGGKLLTNFTAMIEELIARGSEEDKQFLEPLKAHSDEWLGLSMKIG 517

Query: 506 E 506
           E
Sbjct: 518 E 518


>gi|149926650|ref|ZP_01914910.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149824579|gb|EDM83795.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 596

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 93/501 (18%), Positives = 172/501 (34%), Gaps = 76/501 (15%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG-------ERWDKVEFHP-AWHALL 107
              E +    ++   +E  +        L      G        + D     P  +    
Sbjct: 29  PAFEEIDADTVNQIIEEGGKFC---AEVLQPLNAVGDSEGCTLNKADHSLKTPTGFKEAY 85

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALM 165
           ++ +  G      D ++          +  A   +M        M P +T  +   +   
Sbjct: 86  QQFVEAGWASLSCDPNYGGQGLPV--TVNQAFYEMMNSANQAWTMYPGLTHGAYDCLHEH 143

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +      + PK+ S E+  T             + LTE   GTD+  + S+ +  +DG 
Sbjct: 144 GSQEQKDLYLPKLTSGEWTGT-------------MCLTEPHCGTDLGMLRSKAEPQADGS 190

Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNG 269
           Y ++G K F+SS   D       ++LA++         +  FLVP+ + +     G  N 
Sbjct: 191 YKITGAKIFISSGEHDMAENIIHLVLARLPDAPVGTKGISLFLVPKFIPNADGSIGERNP 250

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    +++K+G   NAT ++      G+L+G  +     +  M     L   + S+    
Sbjct: 251 IFCGAIEHKMGIHGNATCQMNLDGATGWLIGQPHRGLAAMFVMMNAARLGVGMQSLGLTE 310

Query: 330 VSLAEAIHYARRRHVS---------GGI---LIDQPVMKRAIADIALDIAAATALSFRLA 377
           V+   A+ YA+ R                  ++  P +++ +           AL    A
Sbjct: 311 VAYQNAVVYAKDRIQGRSLTGPKSADKPADSILVHPDVRKMLLTTRAYAEGGRALCMWTA 370

Query: 378 NSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              D+  S  +EA          +  PI K +    A    +  M+  GG GYI E  + 
Sbjct: 371 LELDKELSHPDEAVRKEASEMVALATPIVKAFITDNAWEATSHCMQVYGGHGYIAEWGME 430

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R+S  N I  G+     LD+L     G             D G+   K   ++R   
Sbjct: 431 QYVRDSRINMIYEGTNTIQSLDLLGRKVLG-------------DGGAKLMKFGKMVRALC 477

Query: 492 SLCKEDKGLARFLTEKIALAS 512
                +  +  F+ E +A   
Sbjct: 478 EAEANNPAMKEFI-EPLADLG 497


>gi|40063113|gb|AAR37960.1| acyl-CoA dehydrogenase [uncultured marine bacterium 561]
          Length = 382

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 80/394 (20%), Positives = 138/394 (35%), Gaps = 34/394 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +++AR A           P  E+W++    P    L       GL C      +      
Sbjct: 14  RDMARRAFE-----KEISPHYEQWEEEHMVP--RELWNTLGSAGLLCPDVAEEYGGAGTT 66

Query: 131 QAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               +              A      S   A  ++   TP     W P++ + E      
Sbjct: 67  PHVTLAMIEELSYMCFGGFASAYGIHSNIIAPYLSRHGTPEQKAHWLPRMVTGEC----- 121

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                      L +TE   G+D+ +I +   +  D  + L+G K F+++ +    +++A 
Sbjct: 122 --------VGALAMTEPGAGSDVQSIRTNAVRDGDE-WVLNGSKIFITNGIHADLVIVAA 172

Query: 249 -VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304
             +   G       L D    G    +   KIG  ++ T  L F++       LLG+ N 
Sbjct: 173 ITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTSDTALLFFTDVRLPADALLGEANK 232

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + D      L  A  +V+    +L   + Y + R   G  +      +  +AD+  
Sbjct: 233 GFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKEREAFGQKIGGFQNTRFKLADVKT 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           DIA   A   +    +      SEEAA  ++         C+M   V  + ++C GG GY
Sbjct: 293 DIAINRAFYEKCTEKYANDDLSSEEAAMLKLA-------SCEMQCRVADQCLQCFGGYGY 345

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  I+R Y ++    I  G+   M   V   +
Sbjct: 346 TTEYPISRFYVDARIQPIYGGTSEIMRELVARSI 379


>gi|90422668|ref|YP_531038.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104682|gb|ABD86719.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 615

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 104/508 (20%), Positives = 191/508 (37%), Gaps = 69/508 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHD 113
             G+Y    TA  L     + +  L      G+         KV   P W    +R I  
Sbjct: 50  HYGDYDSEITAAVLEEAGRFASDVLAPLNRVGDEHGIKLQHGKVTTAPGWPDAYQRWIAA 109

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
           G +    D +F       A  + AA   + A       + P +T +++ AL    +  + 
Sbjct: 110 GWNAVSGDEAFGGQGLPLA--LNAACTEIWAASNVAFGLCPLLTLSAIEALDAHGSDALK 167

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K +  K+ S E+  T             + LTE + G+D+ A+ S+ ++  DG Y + G 
Sbjct: 168 KIYLEKLVSGEWPGT-------------MQLTEPQAGSDVGALRSRAERYGDGSYRIIGS 214

Query: 232 KWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    D        +LA++         +  FL+P+ L +     G  N +    +
Sbjct: 215 KIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFLVNADGSLGERNDIYPTGI 274

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  +  T  +   +     G+L+G+ N     +  M     L   +  V     + 
Sbjct: 275 EHKLGMHAAPTCTMTIGDHGGAVGYLVGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 334

Query: 333 AEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +A+ +A+ R               +I  P +KR +  +    AAA  + +  A + D A
Sbjct: 335 QQALAFAQDRKQGRAIGEKPSKSDPIIVHPDVKRMLLQMRAMTAAARTICYATAVAIDIA 394

Query: 384 KSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               + A  A        + PI K +   +   V +  ++  GG G+IEE   A+H+R++
Sbjct: 395 NRSDDPAIKAAAATRAALLTPIAKAYATDIGNEVASLGVQVHGGMGFIEETGAAQHFRDA 454

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-------GSSGKKVITILR 488
               I  G+       L    L   G      L S L   +         S       LR
Sbjct: 455 RITPIYEGTNGIQAIDLVTRKLAPNGGEAVWALISELSATVDEVEASNDPSFGTTGAKLR 514

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAA 516
           ++++  +     +++L E++  A + A 
Sbjct: 515 EALAALERA---SKWLLERVVSAPNDAL 539


>gi|260548811|ref|ZP_05823033.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260407979|gb|EEX01450.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 600

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 87/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSDEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGTIGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIVHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|304312977|ref|YP_003812575.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium
           HdN1]
 gi|301798710|emb|CBL46943.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium
           HdN1]
          Length = 382

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 142/379 (37%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E W++    P    L  ++   GL        +            A    LM 
Sbjct: 25  KEITPHVEAWEEAGEIP--RDLYLKAGATGLLGIGHPAEYGGTGTDDVFSKIAVSEELMR 82

Query: 145 QLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S       +  V    +  + +   P +   E                 L +
Sbjct: 83  CGAGGVVASLGSLDIGLPPVWKWGSAELKERICPAVLRGE-------------KVQALAI 129

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE  GG+D+A + ++  +  D  Y ++G K F++S     +  +A   G  G   +  LL
Sbjct: 130 TEPSGGSDVARLKTRAVREGD-YYRVTGSKTFITSGYYADYYTVAVRTGSEGYGGISLLL 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R   K+G  ++ T EL F +       L+G  N+    +     +  L+
Sbjct: 189 IEKGTLGFSVGRKLKKMGWWASDTAELFFDDCKVPVANLIGAENMGFYAIMSNFQMERLN 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+M+    +++L E++ Y   R   G  L    V++  +A++A  +  A   ++R+A  
Sbjct: 249 LAVMAYMTAQLALEESLRYVHEREAFGKPLAKFQVLRHKLAEMATKVEVAKEYTWRIAAR 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                S  +E + A+  A     +       V  EA++  GG G++ E  + R YR++  
Sbjct: 309 IQAGDSVVKEISMAKNFATSVSDY-------VTYEAVQIFGGMGFMRETLVERLYRDNRI 361

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 362 LAIGGGTAEIMNEVIAKQL 380


>gi|294851792|ref|ZP_06792465.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|294820381|gb|EFG37380.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 592

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 85/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTNNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 EAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +       A      A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDSADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIGLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|302894009|ref|XP_003045885.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726812|gb|EEU40172.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 442

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 142/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E       ++ +    GL        +          I        A    
Sbjct: 85  PKAREMDEAEEMD--PEIVEQLFEQGLMGVEIPEEYGGAGMNFTSAIIGIEELARADPSV 142

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T   + +    +P + K W P++               T+      L+E   
Sbjct: 143 SVLVDVHNTLCNTAIINYGSPALKKKWLPRL--------------ATNTVASFCLSEPVS 188

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++  + +DG     G  W  +S  S  FI+ A ++   G   +   L +   
Sbjct: 189 GSDAFALATKATETADGFKINGGKMWITNSMESGLFIVFANLDPSKGYKGITAFLVEKGT 248

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    + + K+G R+++T  +   +    ++   N+        K  I  L+   + ++
Sbjct: 249 PGFSIAKKEKKLGIRASSTCVINLDDV---VVPKENLLGERGHGYKYAISLLNEGRIGIA 305

Query: 327 GMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                LA      A  Y    R   G ++ +   M+  IA    +IAAA AL +  A   
Sbjct: 306 AQMTGLALGAWENAARYVWNDRKQFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAARKK 365

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   +AA A       K +  ++A  V   A+E +GG G++ E    +++R+S   
Sbjct: 366 EAGENFVRDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKYFRDSKIG 418

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+ N  +  +  LL+K
Sbjct: 419 AIYEGTSNIQLNTIAKLLQK 438


>gi|209963716|ref|YP_002296631.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209957182|gb|ACI97818.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 383

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 154/414 (37%), Gaps = 43/414 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P  + ++L +  +  L    +E A              P  +RWD+         +  R+
Sbjct: 7   PRWMTEDLRIFHDAALKFFERECA--------------PHAKRWDEQGVVD--REVWTRA 50

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL C+     +       AH+       + A      +   +   A  +    +   
Sbjct: 51  GEAGLLCASMPEEYGGAGGDFAHEAVLIDARMKAGAGHFGISLHNGIVAPYILHYGSEEQ 110

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P++ S E             +   + +TE   G+D+  + +  +   +  Y L+G
Sbjct: 111 KRRWLPRLASGE-------------LVGAIAMTEPGTGSDLQGVRTSARLDGN-QYVLNG 156

Query: 231 HKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVE 288
            K F+++  +    I++A+ +   G      ++ +    +G    R  +KIG +   T E
Sbjct: 157 SKTFITNGQTANLIIVVAKTDPAAGAKGTSLIVVETDAVDGFRRGRNLDKIGLKGQDTSE 216

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F +        L      G V+ M+ L    L  A+ +++G+   +A  + Y ++R  
Sbjct: 217 LFFDDVRVPTSSLLGPQPGLGFVQLMQQLPQERLIIALEALAGIEAGIAATLDYVKQRKA 276

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +ID    +  +A    ++  A A         D+   R  +       A + K W 
Sbjct: 277 FGQRIIDFQNTRFTLAQAVTEMRVARAFC-------DDCTERHLKGELDAATAAMAKLWL 329

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +   A++ + ++  GG GY+ E  IAR + ++    I  G+   M   +   L
Sbjct: 330 TERQCAILDDCLQLHGGYGYMNEYPIARLWADARVGKIYGGTNEIMKELIGRTL 383


>gi|157105307|ref|XP_001648811.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108869037|gb|EAT33262.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 420

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 144/433 (33%), Gaps = 49/433 (11%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
               AL +     V      +G  + +S   +E+  M          P    Y   G   
Sbjct: 14  PACRALSSKAAPAVEA--SSMGPSFAMSDEQKEIVDMTKKFVREEIIPVAGQYDKTG--- 68

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      ++R++   GL  +                   A             +  
Sbjct: 69  ---EYP---WPIIRKAWELGLMNNHIPADIGGTDMSIMTSCMIAEELAYGCTGIMTALEA 122

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V +   P   K +  ++              +  +     +TE   G+D+  +
Sbjct: 123 SGLGQTPVIIAGNPEQKKKYLGRLL-------------EEPLVAAYCVTEPGAGSDVNGV 169

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 170 KTRAEKKGDEYILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERDTPGLT 229

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 230 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLIGEGSGFKIAMGTFDKTRPPVAAGAV 286

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EA+ Y+  R   G  +     +   +AD+A+ +  A  ++ + A   D+ + 
Sbjct: 287 GLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETARLITMKSAWEVDQGRR 346

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K +   MA  V ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 347 NS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEG 399

Query: 446 SGNAMVLDVLNLL 458
           +     + +   +
Sbjct: 400 TSQIQRMIISRNM 412


>gi|23501316|ref|NP_697443.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161618387|ref|YP_001592274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis
           ATCC 23365]
 gi|254703765|ref|ZP_05165593.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|260566981|ref|ZP_05837451.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261754412|ref|ZP_05998121.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|23347206|gb|AAN29358.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161335198|gb|ABX61503.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365]
 gi|260156499|gb|EEW91579.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261744165|gb|EEY32091.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 592

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRNWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|320592978|gb|EFX05387.1| acyl-CoA dehydrogenase [Grosmannia clavigera kw1407]
          Length = 398

 Score =  266 bits (680), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 142/380 (37%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E       ++ R    GL        +          I A      A    
Sbjct: 41  PKAREMDEAEAMD--PEIVERLFEQGLMGIEIPEEYGGSGMNFTSAIVAIEELARADPSV 98

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  + V +   +P + K   PK+               T       L+E   
Sbjct: 99  SVLVDVHNTLVNTVFIKYASPALKKRILPKL--------------ATESVGSFCLSEPVS 144

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++  +   G        W  +S  +D F++ A ++   G   +   L +   
Sbjct: 145 GSDAFALATRATESESGFRISGSKMWITNSMEADVFVVFANLDPAKGYRGITAFLVEKGT 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G    + + K+G R+++T  + F +     +   N+        K  I  L+   + ++
Sbjct: 205 KGFSIAKKEKKLGIRASSTCVINFDDVD---IPKENLLGERGHGYKYAIGLLNEGRIGIA 261

Query: 327 GMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                LA      A+ Y    R   G ++ +   M+   A   ++IAAA AL +  +   
Sbjct: 262 AQMTGLALGAWENAVKYCWNDRKQFGQLIGEFQGMQHQFAQSYVEIAAARALVYNASRKK 321

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +   ++AA A       K +  ++A  V + A+E +GG G++ E    +++R+S   
Sbjct: 322 EAGEDFVKDAAMA-------KLYASQVAGRVSSLAVEWMGGMGFVREGLAEKYFRDSKIG 374

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           +I  G+ N  +  +  LL+K
Sbjct: 375 AIYEGTSNIQLNTIAKLLQK 394


>gi|224825621|ref|ZP_03698726.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224602542|gb|EEG08720.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 594

 Score =  266 bits (680), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 101/506 (19%), Positives = 175/506 (34%), Gaps = 55/506 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVE 98
           ++  L            E  G  +     +E  R A      L+      G R    KV 
Sbjct: 14  VMQELAGLAEVSALPGWEDAGAELAEAVLEEAGRFAGEVIAPLNVVGDREGSRLVDGKVA 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +     + +  G        +F      Q        ++  A L        +  +
Sbjct: 74  VPTGFAEAYHQFVEAGWGGISSPEAFGGQSLPQLLAKPVTEMWKSACLAFSLCPMLTQGA 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    TP     +  K+ S E+  T             + LTE + G+D++A+ S+ 
Sbjct: 134 LEALLHHGTPEQQNAYLAKLVSGEWTGT-------------MNLTEPQAGSDLSAVRSRA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED-------- 264
               D  Y + G K F++    D       ++LA+  +   G   +   +          
Sbjct: 181 MPEDDH-YRIFGSKIFITWGEHDVTENIVHLVLARLPDAPAGVKGISLFVVPKYLLNADG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLD 319
             G+ N +    L++K+G   + T  L F       G+L+G+ N     +  M     L 
Sbjct: 240 TPGTRNDVQCVSLEHKLGIHGSPTAVLAFGESAGAIGYLVGEPNRGLEYMFTMMNHARLA 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMKRAIADIALDIAAATAL 372
             +  V+    +  +A  YAR R         S G +I  P ++R +  +     A  AL
Sbjct: 300 VGLEGVAISERAYQQARDYARERVQGRALGHESAGPIIRHPDVRRMLMTMKSQAEAMRAL 359

Query: 373 SFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           ++  A   D A   ++ A  AR       + P+ K WC + A  V +  ++  GG G+IE
Sbjct: 360 AYVTAAYMDLAARHTDPAERARYQSRVELLTPVVKGWCTETAQEVASLGVQVHGGMGFIE 419

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           E   A+H R++   +I  G+      D+L    L +       L   +  D    G    
Sbjct: 420 ETGAAQHLRDARITTIYEGTTGIQANDLLGRKTLREQGRTLLALIEEMRADTARVGALDG 479

Query: 485 TILRDSIS----LCKEDKGLARFLTE 506
              R   +      KE +G  R L +
Sbjct: 480 EAFRQLAAAQNVAIKELEGATRHLID 505


>gi|119386341|ref|YP_917396.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376936|gb|ABL71700.1| isovaleryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 386

 Score =  266 bits (680), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 145/399 (36%), Gaps = 37/399 (9%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    P  + L R     GL           
Sbjct: 9   DLGEDVNALRETVHRWAQERVKPIAAEVDRKNAFP--NELWREMGDLGLLGITVSEELGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L  T      + PK+ S E+  
Sbjct: 67  SGMGYLAHVVATEEIARASASVSLSYGAHSNLCVNQIKLNGTDEQRAKYLPKLCSGEH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E+  G+D+  +  + +K +D         W  ++P +   ++
Sbjct: 125 -----------VGALAMSEEGAGSDVVGMKLRAEKRNDRYVLNGNKYWITNAPDAHTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   + +    G       +K+G R + T EL F +         NV 
Sbjct: 174 YAKTDPEAGSKGITAFIVERGMKGFSTSPHFDKLGMRGSNTGELIFEDCEVPF---ENVL 230

Query: 306 TGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               + +++L+       L  + +    M   L E + Y + R   G  +    +M+  I
Sbjct: 231 GAEGKGVRVLMSGLDYERLVLSGIGTGIMAACLDEVMPYVKERKQFGQPIGSFQLMQGKI 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + +  A A  + +A + D  K   ++AA A         +  + A     +A++ +
Sbjct: 291 ADMYVALNTARAYVYEVAKACDAGKVTRQDAAGA-------VLYASEQAMVQAHQAVQAL 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+G++ +  ++R +R++    I  G+     + +   L
Sbjct: 344 GGAGFLNDSVVSRLFRDAKLMEIGAGTSEIRRMLIGREL 382


>gi|320164485|gb|EFW41384.1| short-chain specific acyl-CoA dehydrogenase [Capsaspora owczarzaki
           ATCC 30864]
          Length = 416

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 136/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   A +      GL        +            A           
Sbjct: 60  PNAAKHDKDHSFP--KAQVEHLAKLGLMGITTSTDYGGSGNDYLAYAIAMEEISRGDASV 117

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +     V    T    K W     S E                  GL+E   
Sbjct: 118 GVIMSAHNSLYCAPVGKFATHEQKKLWLTPFASGEQ-------------IGCFGLSEPGN 164

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  + + D         W  ++  + A I+ A  +  +    +   +   + 
Sbjct: 165 GSDAGAASTTAKLVGDEWVLNGTKAWITNAYEASAAIVFATTDRSLKHRGISAFIVPTNA 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G    R ++K+G R ++T +L   +          +     E  KI ++ LD   + ++
Sbjct: 225 PGFSLGRKEDKLGIRGSSTAQLIMEDCRIPKNM---LLGKEGEGFKIAMMTLDGGRIGIA 281

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A+     A+ YAR R   G  + D   ++  IAD+ L + +A  L++  A   D
Sbjct: 282 GQGLGIAQASLDCAVKYARDRKAFGKPICDLQAIQFKIADMNLKLHSARLLTWAAAQKAD 341

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E AA A++ A  T  +          +A++ +GG GY+ +    RHYR++    
Sbjct: 342 SHLDFTEFAAMAKLAASETATFN-------AHQAIQILGGMGYVSDMPAERHYRDARITE 394

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 395 IYEGTSEVQRLVIAGKVIK 413


>gi|254283095|ref|ZP_04958063.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
 gi|219679298|gb|EED35647.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
          Length = 587

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 104/563 (18%), Positives = 198/563 (35%), Gaps = 48/563 (8%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG- 88
               M     D +   +     S+       LG  + +    E ++ A+     L   G 
Sbjct: 5   PLEDMQFLIDDVI--DIENTLGSLPRFAEHGLGPDLTTALLDEASKFASDALAPLRRGGD 62

Query: 89  --PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P      KV   P +  +LR     G      D  +      + +   +  ++  A +
Sbjct: 63  THPATCADGKVTISPGYAEVLRGLGDGGWVGITADAEYGGQALPELYGTASHEMWNSADM 122

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S  +A  +A   +  + + +  +I S E+  T             + LTE  
Sbjct: 123 AFALGPFLSSGAALAIAAHGSDELKEKYLSRINSGEWSGT-------------MNLTESG 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGC 255
            G+D+  + ++ ++  D  Y + G K +++    DA      ++LA++         +  
Sbjct: 170 AGSDLGPMKTRAEREGDH-YRIFGQKIYITWGDHDANENIIHLVLARLPDAPEGSRGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTG 307
           FLVP+ L +     G+ N +    +++K+G   + T  + +       G+L+G+ N    
Sbjct: 229 FLVPKFLVNDDGSLGARNDVYPVSVEHKLGIHGSPTCVMAYGDNDGAIGYLVGEENNGLA 288

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M     L   +  +     +  +A+ YAR R   G  +I+   +KR +  +     
Sbjct: 289 CMFTMMNEARLKVGLQGLGTSEGAYQQAVDYARERVQGGVPIIEHADVKRMLLTMRALNE 348

Query: 368 AATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  AL+F  A + D A    EEA         +M P+ K W  ++   V +  ++  GG 
Sbjct: 349 AMRALAFSEAVTMDLAHYGPEEARTPNQRRIDLMIPVIKGWLTEVGLEVTSNGVQVHGGM 408

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSG 480
           GY+EE   A++ R+    SI  G+      D+LN      G    E +   +   + +  
Sbjct: 409 GYVEETGAAQYMRDVRIASIYEGTNGIQAADLLNRKVGRDGGATMEAVQQEIRDTVEALK 468

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN-RFLDNCH 539
                 L       +         T+ +  A S +      M    D  ++         
Sbjct: 469 AADNPALNTLGGALESALADHVETTQYLLSALSDSTFR--AMGGSFDYMMQTGYLFGGWQ 526

Query: 540 STHCMLHGRFNAAHIIDSLYLDC 562
                L      A    S + +C
Sbjct: 527 LARSALVAGKKLAAGEQSEFCEC 549


>gi|295699088|ref|YP_003606981.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295438301|gb|ADG17470.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 600

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 169/459 (36%), Gaps = 60/459 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDGLH 116
                   +E AR+   +   L      G+R         V     +    R+    G  
Sbjct: 34  ADTARAVLEEAARL---HEGVLAPLNVDGDRNPSTWKDGAVTATAGFKDAFRQFAEGGWQ 90

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +      +        +   A L  G     +  +   +    +  + + + P
Sbjct: 91  GLQHPSEYGGQDLPKLLSTPCIEMLNAANLSLGLCPLLTDGAIEALLTAGSEELKQRYVP 150

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D++ + ++ +   DG Y +SG K F++
Sbjct: 151 KMISGEWTGT-------------MNLTEPQAGSDLSLVRTRAEPQGDGSYRISGTKIFIT 197

Query: 237 SPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA+          +  F+VP+ L +     G  N +    +++K+G
Sbjct: 198 WGEHDMTENIVHLVLARTPSAPEGVKGISLFVVPKFLVNEDGSLGERNDVHCVSIEHKLG 257

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T  L+F +     G L+G+ N     +  M         +  V+    +  +A+ 
Sbjct: 258 IKASPTAVLQFGDHGGAIGQLVGEENRGLEYMFIMMNAARFAVGVQGVAISDRAYQQAVA 317

Query: 338 YARRRHVSGGI----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           YA+ R   G            +I  P ++R ++ +      A AL++  A+  D A    
Sbjct: 318 YAKERVQ-GRPVDGSAKQSVAIIQHPDVRRMLSTMRALTEGARALAYVSASHCDLAHRHP 376

Query: 388 EEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + A  A   A      PI K W  +M+  V +  ++  GG G+IEE   A++YR++    
Sbjct: 377 DRATRANHQAIYEYLVPIVKGWSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDARILP 436

Query: 442 ILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           I  G+       L     +     +   L + ++  L +
Sbjct: 437 IYEGTTAIQANDLVGRKTMRDNGEVAGMLLAQIDATLAA 475


>gi|329847548|ref|ZP_08262576.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328842611|gb|EGF92180.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 382

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L +     G+                 AH I    +   +   
Sbjct: 26  PLANDTDRDDQFPMH--LWKAMGDMGVLGLTVPEIHGGAAMGYLAHVIAMEEISRASASI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + PK+ S ++                L ++E   
Sbjct: 84  GLSYGAHSNLCVNQINRNGTPEQKAKYLPKLISGDH-------------VGALAMSETGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  + +D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 131 GSDVVSMRLRADRKNDRYVLNGSKMWITNGPDADVLVVYAKTDMDAGSKGITAFLIEKDF 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L         +   +  +  ++S   
Sbjct: 191 TGFSVAQKLDKLGMRGSHTGELVFEDCEVPYDNVLGTEGRGAAVLMSGLDYERVVLSGGP 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  MR  L   I Y   R   G  +    +M+  +AD+    AA  A  + +A + D  +
Sbjct: 251 LGIMRACLDAIIPYIHDREQFGQAIGTFQLMQGKVADMYSTWAACRAYVYAVAQACDRGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  EA++C+GG+GY  E  + R +R++    I  
Sbjct: 311 TTRKDAAG-------CILYAAEKATWMAGEAIQCLGGNGYTNEYPVGRLWRDAKLYEIGA 363

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L + T 
Sbjct: 364 GTSEIRRMLIGRELFEETK 382


>gi|163854363|ref|YP_001628661.1| putative isovaleryl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258091|emb|CAP40390.1| putative isovaleryl-CoA dehydrogenase [Bordetella petrii]
          Length = 392

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 139/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 11  GEDLDMLRDAVRTFAQAE-IAPRAAEVDRSDQFPM--DLWRKFGELGVLGMTASEEYGGA 67

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    T      + PK+ S E+   
Sbjct: 68  NLGYLAHMVVMEEISRASASVGLSYGAHSNLCVNQIHRNGTAEQKARYLPKLISGEH--- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  + P +D  ++ 
Sbjct: 125 ----------VGALAMSEPGAGSDVVSMKLRADKKGDRYVLNGTKMWITNGPDADTLVVY 174

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +       +   L + +  G    +  +K+G R + T EL F +        L    
Sbjct: 175 AKTDPAAHQRGITAFLVEKNFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVN 234

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           G V  +   +  + A++S   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 235 GGVRVLMSGLDYERAVLSGGPLGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLY 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A+ A  + +  + D+    +E     R        +  + A  +  E ++ +GG+G
Sbjct: 295 TTLQASRAFCYAVGKNLDQ--LGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNG 352

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E    R +R++    I  G+     + +   L
Sbjct: 353 YINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|325123410|gb|ADY82933.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 600

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 86/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQALPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSDEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIIHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|254776850|ref|ZP_05218366.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 386

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 144/376 (38%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E  P    +LR S   G+              ++   +R      +A    
Sbjct: 25  PHALEWDAAEHFPV--DVLRESAELGMAAIYCREDVGGSGLRRLDGVRIFEQLAIADPTT 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    TP   K W P++ +               V     LTE   G
Sbjct: 83  AAFLSIHNMCAWMIDSYGTPEQRKGWVPRLAAM-------------DVIASYCLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA++++  +   G Y L G K F+S   + D ++++A+  G  G   +   + +   
Sbjct: 130 SDAAALSTRAVRQG-GDYVLDGVKQFISGAGASDVYLVMARTGGE-GPRGISAFVVEKGS 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G  +  T ++            L  + G      I +       L+ A
Sbjct: 188 AGLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRLNIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A + D
Sbjct: 248 ACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAGALD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E      +  + K +       V  +A++  GG GY+ E  + +  R+   + 
Sbjct: 308 ADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKILRDLRVHR 361

Query: 442 ILLGSGNAMVLDVLNL 457
           IL G+   M + +   
Sbjct: 362 ILEGTNEIMRVVIGRA 377


>gi|307103035|gb|EFN51300.1| hypothetical protein CHLNCDRAFT_56404 [Chlorella variabilis]
          Length = 429

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 144/403 (35%), Gaps = 29/403 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   ++   +A     +     P    WD     P     ++R+   G        
Sbjct: 47  DFDLTEDQRQFQHVAETFARE--ELAPYSADWDAKHHFPI--DTIKRAADLGFGGLYVGE 102

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +              +     +S       ++    T R    +   + S E
Sbjct: 103 DVGGAALSRLDAAIIFEALSWGCVPTAAYLSIHNMVCHVIDRYGTARQRGAYLTALTSME 162

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSP-MS 240
                              LTE   G+D +A+    ++    G Y L+G K F+S   +S
Sbjct: 163 -------------ALASYCLTEPSAGSDASALKMTARREGASGDYILNGAKAFISGGGVS 209

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D ++++A+  G  G   +   L +    GL + + ++K+G  +  T  + F +       
Sbjct: 210 DVYLVMART-GEPGPKGISAFLVEKGTKGLSFGKPESKLGWNAQPTTAVMFDDVRVPSKN 268

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    MK L    ++    S+ G +  L  A  Y + R   GG +      + 
Sbjct: 269 RVGQEGEGFKLAMKALDGGRINIGACSIGGAQFCLDTAREYTQARQAFGGPISQFQATQF 328

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I A+  +    A + D           A +   + K +       V  +A++
Sbjct: 329 RVADMATSIQASRLMVRHAAAALDAHSPT------ATMECAMAKRFATDACYRVTDDALQ 382

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +GG GY++E  I R+ R+   + IL G+   M + +   L+K
Sbjct: 383 LLGGYGYLKEYPIERYMRDLRVHCILEGTNEVMRIIINRELDK 425


>gi|56421541|ref|YP_148859.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56381383|dbj|BAD77291.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 594

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 89/446 (19%), Positives = 164/446 (36%), Gaps = 60/446 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +      A     A   A    +     +  + L
Sbjct: 66  KLLRKAGELGLLSADIPEEYGGLGLDKVSSAIIAEKMAPAGGFAISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQKYLPYLATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  +S  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNSGFADVFVVYAKVDGEH----FTAFIVERDFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENVLGEIGKGHVIAFNILNIGRYKLGLGAVGGAKRALEITLKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + AA +  +R    FDE             K  +
Sbjct: 289 NQRQQFKRPISQFTLTQEKFATMASRLYAAESSVYRTVGLFDERMGLLDAEKAKDGKEVA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  ++   ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATEVLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L L +K   L E+L     ++ G+                +
Sbjct: 409 EINRLLVPGMYLKKALKGELPLFQKAQQLQEELMMMAAEEPGT-------------GALE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAG 521
           ++K L R   +KIAL  +  A  + G
Sbjct: 456 QEKYLVRN-AKKIALMVAGLAAQKYG 480


>gi|83859545|ref|ZP_00953065.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851904|gb|EAP89758.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 593

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 99/510 (19%), Positives = 187/510 (36%), Gaps = 60/510 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG-GERWDK-VEF 99
           +L  L+               E +++   +E  +        L+  G   G + D  V  
Sbjct: 14  VLNELLNVQQYSDIPGFADASEDIVNAILEEGGKFCEGVLHPLNKVGDHEGCKLDDGVVT 73

Query: 100 HP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            P  +     +    G         F        H +  A   ++        M P +T+
Sbjct: 74  TPTGFKDAYDQMTEGGWTALSAPAEFGGQALP--HYLNLAFNEMVTSCNMAFGMYPGLTN 131

Query: 159 ASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  AL    +    + + PK+FS E+  T             + LTE   GTD+  + +
Sbjct: 132 GAAQALLVGGSQEQKELYLPKMFSGEWSGT-------------MNLTEPHCGTDLGMLRT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +     DG Y +SG K ++S+   +       ++LA+VEG       +  F+VP+ L D 
Sbjct: 179 KAVPQGDGTYKISGQKIWISAGEHEMSGNIVHLVLARVEGAPQGVKGISLFVVPKYLPDA 238

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L+ K+G   NAT  + +    G+L+G+ N     +  M     L  
Sbjct: 239 DGNPGERNSLKCGGLEEKMGIHGNATCVMNYDEATGWLVGEENKGLKIMFVMMNEARLGV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIA 367
            +  +     +   ++ +A+ R   G               +I  P ++R + D  + + 
Sbjct: 299 GLQGLGLAETAYQYSLAFAKDRIQ-GRSLTGPKNPDGPADPIIVHPDVRRMLMDQKVFVE 357

Query: 368 AATALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A A ++  A      +  ++   R +   +  ++ PI K +        ++  ++  GG
Sbjct: 358 GARAFTYWTALQGDLEHKAEDEAVREKAGDFMALLTPIVKGYLTDKGYESVSTGLQVHGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
           SG+  E  I +  R++    I  G+     LD++   L   G       F  L+  +  +
Sbjct: 418 SGFTREWGIEQLLRDARITLIYEGTNGVQALDLVGRKLAMAGMRPINSFFGELDDFIAEN 477

Query: 480 -GKKVITILRDSISLCKE-DKGLARFLTEK 507
            G   + I  D ++  K   +    +L EK
Sbjct: 478 QGDADLKIYVDGLADVKAKLQKATNWLVEK 507


>gi|319795987|ref|YP_004157627.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598450|gb|ADU39516.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 390

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 144/402 (35%), Gaps = 30/402 (7%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE + S  +      AN   P+           D+    P  H L ++    GLH    
Sbjct: 10  LGEDIDSLRSAIQDFAANEIAPR-------AADIDRDNLFP--HDLWQKLGELGLHGMTV 60

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              F    +   AH +    +   +        + S    + +    +    K + PK+ 
Sbjct: 61  KEEFGGTELGYLAHIVAMEEVSRASASVGLSYGAHSNLCVNQIHRNGSDAQKKKYLPKLV 120

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+  +  + +K +       G  W  +   
Sbjct: 121 SGEH-------------VGALAMSEPNAGSDVVRMKLKAEKKNGYYVLNGGKMWITNGGD 167

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ E  +G   +   + + +  G       +K+G R + T  L F N      
Sbjct: 168 ADTLVIYAKTEPEMGARGMTAFIVEKNYKGFSAGTKLDKLGMRGSNTYPLFFDNCEVPEE 227

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L       + +   +  + A++S   +  M   +   + +   R   G  + +  +M+
Sbjct: 228 NVLGGEGLGAKVLMSGLDYERAVLSGGPLGIMAACMDAVLPFIHERKQFGQSIGEFQLMQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+     A  A  + +  + D    R++ A   R  A     +  + A  +  EA+
Sbjct: 288 GKLADMYSTWQATRAYVYAVGKACD----RNDHARTFRKDAAGAILYSAEKATWMAGEAI 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG GY ++  + R +R++    I  G+     + +   L
Sbjct: 344 QALGGVGYTKDFPVERLWRDAKLYEIGAGTSEIRRMLIGREL 385


>gi|4557233|ref|NP_000008.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Homo sapiens]
 gi|113019|sp|P16219|ACADS_HUMAN RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|337928|gb|AAA60307.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Homo
           sapiens]
 gi|2821942|emb|CAB02492.1| acyl-CoA dehydrogenase [Homo sapiens]
 gi|4099119|gb|AAD00552.1| short chain acyl CoA dehydrogenase [Homo sapiens]
 gi|119618624|gb|EAW98218.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo
           sapiens]
 gi|311349298|gb|ADP91814.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349300|gb|ADP91815.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349302|gb|ADP91816.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349304|gb|ADP91817.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349306|gb|ADP91818.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349308|gb|ADP91819.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349310|gb|ADP91820.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349312|gb|ADP91821.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349314|gb|ADP91822.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349316|gb|ADP91823.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349318|gb|ADP91824.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349320|gb|ADP91825.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349324|gb|ADP91827.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349326|gb|ADP91828.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349328|gb|ADP91829.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349330|gb|ADP91830.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349332|gb|ADP91831.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349334|gb|ADP91832.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349336|gb|ADP91833.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349338|gb|ADP91834.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349340|gb|ADP91835.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349342|gb|ADP91836.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349346|gb|ADP91838.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349348|gb|ADP91839.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349350|gb|ADP91840.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349352|gb|ADP91841.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349354|gb|ADP91842.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349356|gb|ADP91843.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349358|gb|ADP91844.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349360|gb|ADP91845.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349362|gb|ADP91846.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349364|gb|ADP91847.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349366|gb|ADP91848.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349368|gb|ADP91849.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349372|gb|ADP91851.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349374|gb|ADP91852.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|227487|prf||1704375A short chain acyl-CoA dehydrogenase
          Length = 412

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|88706436|ref|ZP_01104141.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71]
 gi|88699372|gb|EAQ96486.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71]
          Length = 386

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 135/405 (33%), Gaps = 27/405 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q     A   +       P   RWD     P     L  +   G        
Sbjct: 2   DFSLSDEQQAFVESARAFSD--GVLAPNAARWDAESIFP--KDALASAGELGFMGMYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +                    ++    + SM+    +P V ++W P +    
Sbjct: 58  EAGGLALSRLDASLIVEELARGCTTTAAFLTIHNMATSMIGRYCSPAVIEEWCPDLVMG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A++ +      D  Y ++G K F+S      
Sbjct: 117 ------------KTLASYCLTEPGAGSDAASLRTSAVADGDD-YLVNGSKVFISGAGETD 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            +++    G  G   V  LL      G+ Y + + K+G  +  T  + F N     G  L
Sbjct: 164 VLVVMLRTGDAGPKGVSALLVPADAPGITYGKKEEKMGWNAQPTRMVTFDNVRVPKGNRL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G          +      ++ A  SV   + +L EA  Y   R   G  + +    +  +
Sbjct: 224 GAEGQGFAIAMEGLDGGRINIATCSVGTAQQALQEAADYVAEREQFGQAIAEFQATQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ AA  +    A+  D    +      A     + K     +   V  EA++  
Sbjct: 284 ADMLTEVVAARQMVRLAASKLDSKDGQ------ASTYCAMAKRLATDLGFRVCNEALQLF 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           GG GYI E  + RH R++  + IL G+   M + +   L     L
Sbjct: 338 GGYGYIREYPMERHVRDTRVHQILEGTNEIMRVIIARRLMMDGAL 382


>gi|325520839|gb|EGC99836.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 377

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 79/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P   A++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDLDAKLPD--AVVAQLGELGLLGMIVPQELGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IML 246
              M    V     LTE + G++   + ++ + + DG + L+G K F+++       I+ 
Sbjct: 114 ---MAAGRVIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  + F N     + + N+  
Sbjct: 170 AITDPEAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 227 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 287 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 340 GYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|83643932|ref|YP_432367.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83631975|gb|ABC27942.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 376

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 145/375 (38%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P    + R +   G+    ++  +                 LM     
Sbjct: 23  PYIQEWEEAGAFP--REIYRLAGEAGVLGVGFNEKWGGSGENDILMKVVVSEELMRSTSG 80

Query: 149 GHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G + S      ++  +A   +P +     P +   E                 L +TE  
Sbjct: 81  GFVASLGSLDIALPPIARWGSPILQNKVIPSVLQGE-------------KIAALAITEPG 127

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+A + +   +  D  Y ++G K F++S     F  +A   G  G   +  +L +  
Sbjct: 128 GGSDVANLQTHAVRKGD-FYRINGSKTFITSGHRADFYTVAVRTGGEGHGGISLILVERD 186

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
            NG    +   K+G  ++ T EL F++       L+G  N     +    ++  L  +IM
Sbjct: 187 RNGFSTGQPLKKMGWWASDTAELFFNDCLVPAENLIGPENSGFIAIMSNFLMERLALSIM 246

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +    +++  +A+ YAR+R   G  +    V+K  + ++A  +  A   +  +A      
Sbjct: 247 AYMTAQIAYEQALSYARQRDAFGRKIAKFQVIKHRLVEMATQVDIARNYTLNIAQRIQNG 306

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +  +E A A       K +C + A  V   A++  GG GY+ E  + R YR++   SI 
Sbjct: 307 DNPIKEVAMA-------KNFCSQAAQEVTNAAVQIHGGMGYMRESVVERLYRDARILSIG 359

Query: 444 LGSGNAMVLDVLNLL 458
            GS   M   +   L
Sbjct: 360 GGSTEIMNEIIAKQL 374


>gi|71065525|ref|YP_264252.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038510|gb|AAZ18818.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 597

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 88/549 (16%), Positives = 180/549 (32%), Gaps = 70/549 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           L    N Y +              + +      E              N  +P   +   
Sbjct: 17  LLDSENHYKTLPAFQEADRELMDSLFEMAASFAE--------------NELSPLNQSGDA 62

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G ++D  +V     +    ++    G      + +F       +       +   A   
Sbjct: 63  EGCQFDNGQVTTPKGFKEAYKQYCELGFPALSAEEAFGGQNMPVSLSTVINEMVGTANWS 122

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +   +    T    + +  K+ S E+  T             + LTE   
Sbjct: 123 FSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSGT-------------MCLTEAHA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCF 256
           G+D+  I ++ +  +DG Y ++G K F+S+   D       I LA++ G       +  F
Sbjct: 170 GSDLGIIRTKAEPNTDGSYSITGQKIFISAGEHDLTDNIIHICLARLPGAPAGTKGISLF 229

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           +VP+++ +     G  N +    +++K+G +++AT  + F    G+L+G  N     +  
Sbjct: 230 IVPKIMVNEDNSLGEKNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFT 289

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAI 359
              +  + +A+  ++    +   ++ YA+ R                  +I  P ++  +
Sbjct: 290 FMNVARIGTAVQGLTAAEYAFQGSLMYAKDRLAMRSLSGAKAPEKAADPIIVHPAVRNML 349

Query: 360 ADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
                      AL + L++  D     E            ++ PI K +  +        
Sbjct: 350 LTEKAFAEGGRALVYYLSHFADTVAKGEGDELKFADQMLSLLTPIAKAFLTETGLEAANH 409

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTL 472
            ++  GG G+I E  + ++ R++    +  G+     LD+L     G    L       +
Sbjct: 410 GVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLTNFVKII 469

Query: 473 EQ--DLGSSGKKVITILRDSISLCKEDKGLARFL----TEKIALASSAAALYRAGMNDIA 526
           +   D      ++   +R      KE   L   +    TE       AA  Y      + 
Sbjct: 470 QAFCDDNKDNDEMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVT 529

Query: 527 DVFLENRFL 535
             +L  R  
Sbjct: 530 LAYLWARMA 538


>gi|309779292|ref|ZP_07674054.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921850|gb|EFP67485.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 380

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 137/375 (36%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW+   +      +  ++   G HC+    ++        +          A    
Sbjct: 28  PHHERWEDQGYVD--RVIWEKAAAAGYHCASMPEAYGGAGADIRYSTVLIEEIARAGATG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  + + + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYLLHYGSEALKRHYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+  + +   +  DG  Y L+G K F+++   +D  I++A+     G       + D S
Sbjct: 133 SDLQGVRTTATRSRDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKGTSLFVVDTS 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F N     G LLG+ +     +        L  AI 
Sbjct: 193 MEGFSKGKRLKKVGMKAQDTAELFFDNVRLPAGNLLGEEHRGFAYLMQELPWERLQIAIT 252

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++    +L   + Y R R   G  ++D    + A+A++  ++        +        
Sbjct: 253 AIASAEGALEWTLRYVRERQAFGKSILDFQTARHALAELKTEVQIGRVFVDQCIALKLAG 312

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  +  A+ A       KYW   +   V+   ++  GG GY+ E  IAR + +S    I 
Sbjct: 313 KLDAATASMA-------KYWTTDLQFKVMDRCVQLHGGYGYMWEYPIARAWADSRVQQIY 365

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 366 GGTNEIMKELIARTL 380


>gi|302550362|ref|ZP_07302704.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467980|gb|EFL31073.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 383

 Score =  266 bits (679), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 141/395 (35%), Gaps = 35/395 (8%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            + LAR       TP + A+    E  D+        +++++    G      D  +   
Sbjct: 12  VRRLARDFVEREITPNVVAWDR-AEEVDR--------SIVKKLGEVGFLGLTIDEEYGGS 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                  ++S S+   A  VA   +    + W P + S E    
Sbjct: 63  GGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVAAWGSEEQRRRWLPGLTSGE---- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D   + ++  +  D         +  +   +D  ++ 
Sbjct: 119 ---------AVGCFGLTEPGTGSDAGNLATRAVRDGDDYVINGTKMFITNGTWADVVLLF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+     G   V   L      GL  + +  K+G R  AT EL   +        L    
Sbjct: 170 ARSTDAPGHKGVSAFLVPTGTPGLTRRTIHGKLGLRGQATAELVLEDVRVPASALLGQEG 229

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  I+DIA
Sbjct: 230 KGFSIAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +D+ AA  L++R+A+  D  +S + E++ A       K +  + A      A++  GG G
Sbjct: 290 VDVDAARLLTWRVADLIDRGQSFAVESSKA-------KLFASEAAVRAANNALQVFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI+E    +  R++   ++  G+     L +   L
Sbjct: 343 YIDEYPAGKLLRDARVMTLYEGTSQIQKLVIGRAL 377


>gi|91793597|ref|YP_563248.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91715599|gb|ABE55525.1| isovaleryl-CoA dehydrogenase [Shewanella denitrificans OS217]
          Length = 389

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 131/358 (36%), Gaps = 24/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        F    +   AH I    +   +        + S    + + 
Sbjct: 47  QLWPVLGDMGLLGVTVPEEFGGANMGYLAHVIAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ S E+                L ++E   G+D+ ++    +K+ D
Sbjct: 107 RNGNDAQRAKYLPKLVSGEH-------------IGALAMSEPNAGSDVVSMKLNARKVGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAHTYVIYAKTDISKGAHGITAFIVERGSKGFTQAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L      V+ +   +  +  ++S   +  M   +   + Y  
Sbjct: 214 SNTCELVFEDCEVPEENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMAACMDIVVPYIH 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +  +++  +AD+   + AA +  + +A S D  ++  ++AA A       
Sbjct: 274 EREQFGKSIGEFQLVQGKLADMYTGMNAARSYVYNVARSCDRGETTRKDAAGA------- 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 327 ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|229578308|ref|YP_002836706.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228009022|gb|ACP44784.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
          Length = 546

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 107/496 (21%), Positives = 211/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLVLVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFLIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKATTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|85106801|ref|XP_962250.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|28923851|gb|EAA33014.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 433

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 137/378 (36%), Gaps = 36/378 (9%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
              D+ E   PA   ++ +    G+        +          I               
Sbjct: 79  RDMDEAEAMDPA---IVEQLFEQGIMGVEIPEEYGGAGMNFTAAIVCIEELARIDPSVSV 135

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++    T  +   +   +  + K + PK+               T+      L+E   G+
Sbjct: 136 MVDVHNTLVNTAVIRWGSEALKKKYLPKL--------------ATNTVGSFCLSEPVSGS 181

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A+ ++  +  +G        W  +S  +D FI+ A V+   G   +   + +    G
Sbjct: 182 DAFALATRAVETENGYKINGSKMWITNSMEADFFIVFANVDPSKGYRGITAFIVEKGMKG 241

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
               + + K+G ++++T  L F +         N+     E  K  I  L+   + +   
Sbjct: 242 FSIAKKEKKLGIKASSTCVLNFDDVEVP---KENILGKVGEGYKYAIGILNEGRIGIGAQ 298

Query: 329 RVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              LA      A+ Y    R   G ++ +   M+  IA    +IAAA AL +  A   + 
Sbjct: 299 MTGLALGAWENAVKYVWNDRKQFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEA 358

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A       K +  ++A  V   A+E +GG G++ E    + +R+S   +I
Sbjct: 359 GEDFVMDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAI 411

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+ N  +  +   L+K
Sbjct: 412 YEGTSNIQLNTIAKTLQK 429


>gi|293610852|ref|ZP_06693152.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827196|gb|EFF85561.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 379

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 41  RDLWNKAGELGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W P + + E             V   + +TE   G+D+ A+ +      D
Sbjct: 101 NFGNEEQKQKWLPTMATGE-------------VVTAIAMTEPGTGSDLQAVRTTAVLEGD 147

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  +++ +      G   +  ++ + +  G    +  NKIG 
Sbjct: 148 E-YVINGSKIFITNGYLCDMAVVVCKTGNSDKGSANLSLIIVEANRAGFSKGKPLNKIGM 206

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 207 KGQDTCELFFDNVRVPKENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQY 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R      E K   E AA A     
Sbjct: 267 TKDRKAFGKPIGAFQNTRFKLAELRTEIDFCRTYLDRCMELQLEEKLSVEAAAAA----- 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   ++ E ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 322 --KYKISDMFSKIVDECLQLHGGYGYMLEYPIARAYIDHRANRIYAGTNEIMKELISRTL 379


>gi|271967416|ref|YP_003341612.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270510591|gb|ACZ88869.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 584

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 131/520 (25%), Positives = 211/520 (40%), Gaps = 53/520 (10%)

Query: 32  IGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
            G+N Y SD  L  L+               LE  G  +      E A   + N P+L  
Sbjct: 32  AGLNWYGSDPTLRFLMHRHLGAGALEWAAPHLERAGALMGGP-ILEHAEETDRNPPRLER 90

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y   G    ++   P++ A  R  +        + R  +         +  A  YL+ Q 
Sbjct: 91  YDRWGHDVSRIVMPPSFEAARRELVAGSFTRPEFAREAK-AAGADPVTMGLAWNYLLYQA 149

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           + G   +       +V +       + +AP+             M           TE+ 
Sbjct: 150 DIGMGCALGTGGDMVVLM------AEAFAPQDVKERVREIFADGMFSGEA--AQMFTERT 201

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLE-- 263
           GG+D+AA+ S      D  + L+G KWF S+    AF++LA+ EG   G   V   L   
Sbjct: 202 GGSDLAALESTATPAGDA-WRLNGLKWFASNANGSAFVVLAKAEGGPDGSRGVAPFLVLR 260

Query: 264 ---DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL------NVSTGPVEDMKI 314
              DG  NG+  +RLK+K+G RS A+ E+EF++   FLL             G + ++  
Sbjct: 261 ERRDGGHNGIRVRRLKDKLGTRSVASAEIEFTDAEAFLLAPESTGTGDGKGLGRMMELTN 320

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A M +S  R +L E++ YAR R   G  LIDQP+M+R +A++ +++ AA AL F
Sbjct: 321 GARLGIATMGLSCARRALVESLCYARSREAFGAALIDQPLMRRKLAELIVEVEAAQALVF 380

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
              ++              R+   + K    ++     ++A+E  GG+GYIE+  +AR  
Sbjct: 381 DGFHT------------RLRLGPALIKLRAARLGVTAASDAIEVHGGNGYIEQWPVARIL 428

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL-FEQLFSTLEQDLGSSGKKVITILRDSISL 493
           R++  N I  G  N + LDV   ++K  +L F    +   +           ++ D I  
Sbjct: 429 RDAQVNPIWEGGDNILCLDVRRAVKKDQHLPFFDRLAEAVRHAPPGDDPTALLVSDRIDR 488

Query: 494 CKEDKGLARF------------LTEKIALASSAAALYRAG 521
            +E  G  R             L + +A   +AA L    
Sbjct: 489 LREALGRWRGLDPVTAEARLFPLAQFMADVYAAALLLEQA 528


>gi|254502714|ref|ZP_05114865.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222438785|gb|EEE45464.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 392

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/391 (20%), Positives = 149/391 (38%), Gaps = 39/391 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           + +   P +  +   G   D+        A   ++   G+  +     F       +   
Sbjct: 33  LDDEMVPNIEKWNDQGV-VDR--------AFWTKTGEAGILGAALPEEFGGAGAPISFDA 83

Query: 136 RAARLYLMAQ-LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
             A  YL  +  E+    S        VA   T    + W PK+ S EY           
Sbjct: 84  VTA--YLQGRKGESSWGFSIQSIVNHYVAAYGTDSQKERWLPKLASGEY----------- 130

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
                + +TE   G+D+ ++ +  + + +  Y L+G K F+++   +D  I++A+ +  +
Sbjct: 131 --VGAIAMTEPGTGSDLKSVKTTAELVGNE-YVLNGSKIFITNGQTADLIIVVAKTDKTM 187

Query: 254 GCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVE 310
           G   V  L+ E    +G    R   K+G ++N T EL F +        L      G  +
Sbjct: 188 GTKGVSLLVLETEGADGFTRGRNLKKLGCKANDTSELFFEDVRVPPENLLGGEEGQGFYQ 247

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            MK L    L  A +++  +  ++ E + Y + R   G  ++D    +  +A+       
Sbjct: 248 LMKQLPWERLIIACLALGVIDFAIDETVRYVQDRKAFGQRVMDFQNTRFKLAECKTKAEV 307

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +         DE    + +AA     A + KYW  ++   +  E ++  GG GY+ E 
Sbjct: 308 LRSFLNDCIARMDEG---TLDAA----TASMAKYWGTQVQNEIANECLQLHGGYGYMMEY 360

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            IAR Y +S    I  GS   M   +   ++
Sbjct: 361 PIARIYADSRVQMIYGGSNEIMKELIARSID 391


>gi|67517089|ref|XP_658428.1| hypothetical protein AN0824.2 [Aspergillus nidulans FGSC A4]
 gi|40746498|gb|EAA65654.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 437

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 136/381 (35%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      AL+      G+        F          I A       
Sbjct: 76  EQIGPKVREMDEAETMD--PALVEHLFEQGIMGIEIPEEFGGAGMNFTAAIVAIEELARV 133

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +   +     +V + W PK+               T       L+
Sbjct: 134 DPSVSVLVDVHNTLVNTAFIKWGDAQVQRTWLPKL--------------ATGTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A +    G   +   + 
Sbjct: 180 EPVSGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    G    + + K+G ++++T  L F +     G LLG+          +     +  
Sbjct: 240 EKDTPGFSIAKKEKKLGIKASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGI 299

Query: 321 AIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           A         +   A  Y    R   G ++ +   M+  IA    +IAAA AL +  A  
Sbjct: 300 AAQMTGLALGAWENAAKYVWNDRRQFGQLVGEFQGMQHQIAQAYTEIAAARALVYNAARK 359

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+S  
Sbjct: 360 KEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKI 412

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 413 GAIYEGTSNIQLQTIAKLLQK 433


>gi|329955335|ref|ZP_08296243.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056]
 gi|328525738|gb|EGF52762.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056]
          Length = 568

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/471 (19%), Positives = 176/471 (37%), Gaps = 48/471 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKRDGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKCELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+         L       Q L    K++   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLRDYELIPCSEDMQPLLDRVKEMTNKLEA 488

Query: 490 SISLCKE--DKGL----ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  KE  D+ L    AR L E  A+   +  L +       ++F ++  
Sbjct: 489 CTNAVKESGDQELLDFVARRLYEMAAVCVMSHLLIQDATKA-PELFAKSAL 538


>gi|309779692|ref|ZP_07674451.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308921633|gb|EFP67271.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 385

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/357 (19%), Positives = 133/357 (37%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        +  +      +   A       L    +   +V   S  + +  T   
Sbjct: 46  EMGLFGLSIPEEYGGIGLAMVQECEVAYDLGHTALAFRSVFGTNVGIGSQGILMDGTDAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             D+ P+I S E             + I   LTE   G+D A++ ++     D       
Sbjct: 106 KADYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATPDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +  L+      G+   +   K+G R   T ++ 
Sbjct: 153 KRYITNAPRAGAFTLMARTGGE-GAGGISALIVPADTPGITLGKPDKKMGQRGTKTCDVM 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YA+ R 
Sbjct: 212 LDNVRVPAANIIGGVAGQGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYAKERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   ++     ++A   K +
Sbjct: 269 QFGQPIADFQLIQAMLADSQTELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASCAKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E    R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQLIIAKNLLR 384


>gi|254474113|ref|ZP_05087505.1| acyl coenzyme A dehydrogenase [Pseudovibrio sp. JE062]
 gi|211956809|gb|EEA92017.1| acyl coenzyme A dehydrogenase [Pseudovibrio sp. JE062]
          Length = 382

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 125/375 (33%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+K +  P    +  +    GL        +          +     +  A    
Sbjct: 27  PHYDEWEKADIFP--RDIWNKMGEQGLLSVDTPEEYGGFGTNFLFSMVIIEEFTRANCSG 84

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L   S   A  +    +    K + PK+ S E                 + +TE  
Sbjct: 85  LGVSLSVHSDIVAPYILNHGSEEQKKKYLPKMVSGEC-------------VGAIAMTEPA 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVPRLLED 264
            G+D+  I +  +K  D  Y ++G K F+++   +D  I++A+      G       L D
Sbjct: 132 AGSDLQGIRTIARKDGDD-YIINGSKIFITNGQHADVVIVVARTNLDVSGSKGTSLFLVD 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSA 321
               G    +  +KIG  S+ T EL F +        L         M        L  A
Sbjct: 191 ADNPGFKRGQNLDKIGLHSSDTSELFFEDLRVPASACLGKLDTGFHIMMNELPRERLTLA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +V+G    LA    Y + R   G  +      +  +A++A D+    A        F 
Sbjct: 251 VGAVAGAEGVLAMTADYVKERQAFGRPVATLQNTRFKMAEMATDVRVHRAFVDECCRLFL 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K              + K    +M   V+   ++  GG GY+ E  ++R + ++    
Sbjct: 311 EGK-------LDNTTVSMAKLGTTEMQGRVVDGCLQLHGGYGYMREYGVSRAFVDARVQR 363

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M   +  
Sbjct: 364 IYGGTSEIMKELISR 378


>gi|169794774|ref|YP_001712567.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213157898|ref|YP_002320696.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482318|ref|YP_002324500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332852225|ref|ZP_08434030.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332870447|ref|ZP_08439211.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169147701|emb|CAM85564.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213057058|gb|ACJ41960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987206|gb|ACJ57505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332729355|gb|EGJ60695.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332732184|gb|EGJ63452.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 600

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 87/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSEEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIVHKFVEANKDNPAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|163795812|ref|ZP_02189776.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159178845|gb|EDP63381.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 597

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/479 (20%), Positives = 187/479 (39%), Gaps = 57/479 (11%)

Query: 65  VLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWD 121
           ++     E  ++A      L+      G R +   V     +    R+ I  G + + ++
Sbjct: 37  LVEQILAEAGKLAGGVLAPLNPVGDKQGSRLENGVVRTPDGFADAYRQFIEGGWNGAPFE 96

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIF 179
             +  +       +  A   +         + P +T A++ AL    T      + PK+ 
Sbjct: 97  EEWGGMGLP--WLVATALQEMWQGANLAFGLCPLLTQAAIDALREVGTDEQKATYLPKLV 154

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E+  T             + LTE + GTD+ AI ++ +K+ DG Y L G K F++   
Sbjct: 155 TGEWTGT-------------MNLTEPQAGTDLGAIRTRAEKVDDGSYRLRGQKIFITYGD 201

Query: 240 SDA-----FIMLAQVEGRV------GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA+    +        ++VP+ L +     G+ N      L++K+G  +
Sbjct: 202 HDFTDNIIHLVLARSPDGIAGTKGLSLYIVPKFLVNPDGSLGARNDAKPLSLEHKLGIHA 261

Query: 284 NATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  +   E      +L+G+ N     +  M     L   +  ++    +  +A  +AR
Sbjct: 262 SPTCIMAYGENEGAVAYLVGEENRGIEYMFIMMNNARLAVGLQGLAVAERAYQQAADFAR 321

Query: 341 RRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            R  S           +I  P ++R +  +   I A   L + +A   D A    + A  
Sbjct: 322 TRVQSRAVQGSTGSVSIIHHPDVRRMLLTMKAQIEAMRGLIYDVAAGIDIADRHPDAATR 381

Query: 393 ARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A   A      P+ K WC   A  + +  ++  GG G+IEE   A+HYR++    I  G+
Sbjct: 382 AGAQARVDLLIPVVKAWCTDTAIEICSTNVQVHGGMGFIEETGAAQHYRDARITPIYEGA 441

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLCKEDKGLA 501
                LD++   +   G    +   + ++  LG  +     + I+RD ++  +E    A
Sbjct: 442 NGVQALDLIGRKVARDGGAAMQGFLADVDATLGALADADAPLAIIRDRLASGREALARA 500


>gi|333028133|ref|ZP_08456197.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332747985|gb|EGJ78426.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 383

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 139/400 (34%), Gaps = 28/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  LS   +   R+A     +     P    WD+ E       ++ +    G      D 
Sbjct: 2   DLRLSEEQEAARRLARDFVEREVV--PYAREWDRAENVD--RGVVAKLGEVGFLGLTIDE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSR 181
            +                   A      ++S S+   A  +A        + W P + S 
Sbjct: 58  EYGGSGGDHLTYCLVTEELGRADSSVRGIVSVSLGLVAKTLAAWGDAEQKRRWLPGLTSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            Y                  LTE   G+D  A+T++  +  D      G  +  +   +D
Sbjct: 118 RY-------------VGCFALTEPGTGSDAGALTTRAVRDGDDWLLTGGKMFITNGTWAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+     G   V   L      G   + L  K+G R  AT EL           L
Sbjct: 165 LALVFARSNDAPGHKGVSAFLVPTGTPGFARRTLHGKLGLRGQATAELVLDGVRVPGSAL 224

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 +  A   V   + +L  A+ +A+ R   G  +    +++  
Sbjct: 225 LGPEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQEL 284

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +ADIALD+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++ 
Sbjct: 285 LADIALDVDAARLLTWRVADLVDRGEPFTGAASRA-------KLFASEAAVRAANNALQV 337

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 338 HGGYGYIDEYPVGKLLRDARVMTLYEGTSQIQKLLIGREL 377


>gi|77458036|ref|YP_347541.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77382039|gb|ABA73552.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 382

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 143/362 (39%), Gaps = 28/362 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ E  P    L  ++   G+    +  +             AA   LM     G +  
Sbjct: 34  WEEAENFP--RELYLKAGAAGILGIGYPEALGGSHEGDLFAKIAASEELMRCGSGGLVAG 91

Query: 154 PSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                  +  +     P V     P++   E                 L +TE  GG+D+
Sbjct: 92  LGSLDIGLPPIVKWARPEVRDCVVPQVLRGE-------------KISALAVTEPGGGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + ++  +  D  Y +SG K F++S +   +  +A   G  G   +  LL + S  G  
Sbjct: 139 ANLQTRAVRDGD-YYRVSGSKTFITSGVRADYYTVAVRTGAPGFGGISLLLIEKSTPGFT 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G  ++ T EL F +     G L+G  N+    +        L  A+M+    
Sbjct: 198 VGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANMTA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +++L E++ +A+ R   G  +    V+K  +A++A  +  +   ++R A      +S  +
Sbjct: 258 QLALEESVKWAKEREAFGKPIGKFQVIKHRLAEMATTLEVSREFTYRQAAKMAAGQSVIK 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E         + K +    +  +  EA++ +GG GY+ E  + R YR++   SI  G+  
Sbjct: 318 E-------ISMAKNFATDTSDRITNEAVQILGGLGYVRESLVERLYRDNRILSIGGGTRE 370

Query: 449 AM 450
            M
Sbjct: 371 VM 372


>gi|322420195|ref|YP_004199418.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320126582|gb|ADW14142.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 385

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 139/376 (36%), Gaps = 23/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+ E  PA+ A L++    G        ++            A      A    
Sbjct: 26  PQAARLDRGEGRPAFIANLKKLARLGFMGLDVSSAYGGSEAGAVAFSVAVTEIARACAST 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S +     ++  + +P   + + P I + +             VA    LTE   G
Sbjct: 86  AVTVSVNNMVCEVIQAIGSPWQKERFIPCICTGDC------------VAGSFALTEAGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP 267
           +D A +++  ++  D         +  S+P +  F++ A  +        +   L +   
Sbjct: 134 SDTAGMSTSARRDGDRWVLNGAKAFITSAPYAGVFVVWAVTDREAPRGSGISCFLVEPGT 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   R + K G R++AT  + F         L+G+LN              +    ++
Sbjct: 194 PGLVIGREEEKTGQRASATCSVSFEECRIPVDALVGELNRGYRVAVGELAGGRIGIGSLA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +L  A  YA +R   G  + +   ++  IAD   ++ AA  L  + A   D  +
Sbjct: 254 LGVGLAALDFATGYASQRRQFGQKICNFQAIRWMIADAYTELEAARLLLMQAAYLKDAGR 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EA+ A       K +  + A      A++ +GG GYI +  + R+ R+    SI  
Sbjct: 314 PFAKEASMA-------KLFATEAANRACYSAVQILGGYGYIADFPVERYARDVRVTSIYE 366

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   + +
Sbjct: 367 GTSEIQRLIISREILR 382


>gi|225175023|ref|ZP_03729020.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169663|gb|EEG78460.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 377

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 155/379 (40%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+ E  P   A++R+    GL       +   V                     
Sbjct: 25  PVAAEYDEQEKFPD--AVIRKMWETGLVNFTVPEALGGVGLDTLTSCVLTEELGRGCAGI 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +  +   + +  +    K + P             P+          LTE   G
Sbjct: 83  TTVAAANSLALYPILIAGSEEQKKKFIP-------------PITTAGKYAAFCLTEPNAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  + + DG Y L+G K F+++   +D F++ A V+   G   +   +   S 
Sbjct: 130 SDAASVATNAKAV-DGGYVLNGSKCFITNGDVADLFVVFATVDKSKGLKGLTAFVVPKS- 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD-----SA 321
           +G+   + + K+G R+++TV +         +   NV  G     K+ +  LD       
Sbjct: 188 DGVSAGKKEIKLGIRASSTVVVN---FDNVFVPAENVLGGEGMGFKVAMQTLDTSRPLIG 244

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   R +   A+ YA+ R   G  + +  +++  +A++A  I A+  L +R A+  D
Sbjct: 245 ALSVGVARGAYESAVKYAKERVQFGQPIANFQMIQAMLANMATRIDASRLLVWRAADMVD 304

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +     ++A++A+  A + K +   +A  V  +A++ +GG GY  E  + ++ R++    
Sbjct: 305 Q-----KDASFAKESA-MAKMYASDVAMDVTTDAVQILGGYGYSREYPVEKYMRDAKIMQ 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + +
Sbjct: 359 IYEGTNQIQRLVIAGNILR 377


>gi|320011675|gb|ADW06525.1| Butyryl-CoA dehydrogenase [Streptomyces flavogriseus ATCC 33331]
          Length = 383

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 140/399 (35%), Gaps = 39/399 (9%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              ++LA    A   TP +  +    E  DK        A++++    G         + 
Sbjct: 10  DAVRQLAEDFVAREITPHVVEWDR-AESVDK--------AIVKKLGALGFLGLTIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSRE 182
                  H         + + ++      SV+    A  +A   +    + W PK+ S E
Sbjct: 61  GSGGD--HLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTIASWGSEEQKRQWLPKLTSGE 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G+D   + ++  +  D         +  +   +D 
Sbjct: 119 -------------AVGCFGLTEPGTGSDAGNLGTKAVRDGDDYVINGSKMFITNGTWADV 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            ++ A+     G   V   L      GL  + +  K+G R  AT EL   +       L+
Sbjct: 166 VLLFARTGDTPGHRGVSAFLVPADAPGLTRRTIHGKLGLRGQATAELVLEDVRVPASTLV 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 +  A   V   + +L  A+ YA  R   G  +    +++  I
Sbjct: 226 GPEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGRSIASYQLVQELI 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +DI++D+ AA  L++R+A+  D  +  +         A   K +  + A      A++  
Sbjct: 286 SDISVDVDAARMLTWRVADLVDRGQDFATA-------ASTAKLFASEAAVRAANNALQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 339 GGYGYIDEYPVGKLVRDARVMTLYEGTSQIQKLIIGRAL 377


>gi|256159118|ref|ZP_05456939.1| Acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256254457|ref|ZP_05459993.1| Acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261221629|ref|ZP_05935910.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265997591|ref|ZP_06110148.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260920213|gb|EEX86866.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262552059|gb|EEZ08049.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 592

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|62289399|ref|YP_221192.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82699326|ref|YP_413900.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189023650|ref|YP_001934418.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237814885|ref|ZP_04593883.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|254688712|ref|ZP_05151966.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254693195|ref|ZP_05155023.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254696840|ref|ZP_05158668.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254709562|ref|ZP_05171373.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254713021|ref|ZP_05174832.1| Acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254716624|ref|ZP_05178435.1| Acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|254729745|ref|ZP_05188323.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256031054|ref|ZP_05444668.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256256959|ref|ZP_05462495.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|256368868|ref|YP_003106374.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260168185|ref|ZP_05754996.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|260545849|ref|ZP_05821590.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260754190|ref|ZP_05866538.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260757410|ref|ZP_05869758.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260761235|ref|ZP_05873578.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883215|ref|ZP_05894829.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261213437|ref|ZP_05927718.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261218425|ref|ZP_05932706.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261317090|ref|ZP_05956287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261320726|ref|ZP_05959923.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261757645|ref|ZP_06001354.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265988126|ref|ZP_06100683.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|297247812|ref|ZP_06931530.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62195531|gb|AAX73831.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615427|emb|CAJ10396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           domain [Brucella melitensis biovar Abortus 2308]
 gi|189019222|gb|ACD71944.1| Acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|237789722|gb|EEP63932.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|255999026|gb|ACU47425.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260097256|gb|EEW81131.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260667728|gb|EEX54668.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260671667|gb|EEX58488.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674298|gb|EEX61119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260872743|gb|EEX79812.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260915044|gb|EEX81905.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260923514|gb|EEX90082.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261293416|gb|EEX96912.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261296313|gb|EEX99809.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261737629|gb|EEY25625.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|264660323|gb|EEZ30584.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|297174981|gb|EFH34328.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 592

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 179/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +       V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISEAREATDWL 510


>gi|307213064|gb|EFN88595.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Harpegnathos saltator]
          Length = 422

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 129/378 (34%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK           +     GL        +         H I    +   +   
Sbjct: 62  PKAAEIDKKNNFDKLKEFWQELGKLGLLGITASTEYGGTGGTYFDHIIVMEEISRASAAI 121

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + ++   T      + PK+ S E+                L ++E   
Sbjct: 122 GLSYGAHSNLCLNQISRNGTEEQKHKYLPKLCSGEHFG-------------ALAMSEAGS 168

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
           G+D+ ++  + +K  D  Y LSG+K W  + P +D  I+ A+          +   + + 
Sbjct: 169 GSDVVSMKLKAEKKGD-YYILSGNKFWITNGPDADTLIVYAKTNPNGKPQHGITAFIIER 227

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +       +LG++N     +        L  A 
Sbjct: 228 GMEGFSTGQKLDKVGMRGSNTSELIFEDCKVPAANVLGEVNKGVYVLFSGLDYERLILAA 287

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +            YA  R      L    +++  +AD+   + +A +  + +A S D 
Sbjct: 288 GPLGVSMSCCDVTFEYAHTRKQFDQYLAKFQMIQSKLADMYTRLCSAKSYLYTIARSADA 347

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   ++             +  + A     +AM+ +GG+GY  + S+ R  R++    I
Sbjct: 348 GERSRKD-------CASVLLFNTENAVKTALDAMQILGGNGYTNDYSVGRLLRDAKLYDI 400

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + +
Sbjct: 401 GAGTNEVRRLVIARAITE 418


>gi|170043822|ref|XP_001849570.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167867122|gb|EDS30505.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 422

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 141/433 (32%), Gaps = 47/433 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
             L   ++   +    E   LG  + L+    E+  M          P    Y   G   
Sbjct: 14  PTLRRALSTKAAPGTVEGSGLGPSFALTDEQTEIVDMTKKFVREEIIPVAAQYDKTG--- 70

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      ++R++   GL  +                                 +  
Sbjct: 71  ---EYP---WPIIRKAWELGLMNNHVPAEIGGTDMSIMTSCLIPEELAYGCTGIMIALEA 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V +       K +  ++              +  +     +TE   G+D+  +
Sbjct: 125 SGLGQTPVIIAGNEAQKKKYLGRLI-------------EEPLVAAYCVTEPGAGSDVNGV 171

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 172 RTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERETPGLT 231

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 232 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGAV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L EA+ YA  R   G  +     +   +AD+A+ +  A  ++ + A   D+ + 
Sbjct: 289 GLAQRCLDEAMKYALERKAFGVPIAAHQAVSFMLADMAIGVETARLITMKSAWEVDQGRR 348

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K +   MA  V ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 349 NS-------YYASIAKCYAADMANKVASDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEG 401

Query: 446 SGNAMVLDVLNLL 458
           +     L +   +
Sbjct: 402 TSQIQRLIISRNM 414


>gi|163742451|ref|ZP_02149838.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161384401|gb|EDQ08783.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 590

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 103/525 (19%), Positives = 192/525 (36%), Gaps = 64/525 (12%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEF 99
           L  L         ++   +         +EL R        L       G R D  KV  
Sbjct: 14  LDHLSQWPQVSALEKYREIDRTDARAALEELGRFCTDLIAPLSFVGDTTGARLDGDKVVL 73

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
             A+     + +  G            +   +     A  +   A +  G     +  + 
Sbjct: 74  PEAFATAYAQFVDMGWQSLAHPVDHGGMGLPRVVGAAATEILNAADMSFGLCPLLTDGAI 133

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +   + S  +  T             + LTE + G+D+  +  + +
Sbjct: 134 DALQLSGTEAQKELYLRPLVSGRWTGT-------------MNLTEPQAGSDLGRVRCKAE 180

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
             +DG Y +SG K F++    +       ++LA+  G       +  FLVP+ L D    
Sbjct: 181 PRADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPDGHRGLSLFLVPKFLVDQDGT 240

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N +    +++K+G R++ T  LE+ N  G+L+G+ N     +  M         + 
Sbjct: 241 PGDRNSVNCVSIEHKLGVRASPTAVLEYDNATGYLIGEENRGLEYMFTMMNAARFAVGVQ 300

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSF 374
            V+    +   A+ YA+ R     I         +I  P ++R +  +   +    +LS 
Sbjct: 301 GVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIGHPDVRRMVLRMRALVEGGRSLSM 360

Query: 375 RLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             A   D     +   R+E A  A  + P+ K +C + A  V +  ++  GG G+IEE  
Sbjct: 361 AAAGWLDLSQNGDDDIRAETAPVAEFLVPLVKAFCSERAVEVASLGVQIHGGMGFIEETG 420

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +A+ YR++    I  G+      D+L                + +D G + ++   ++ D
Sbjct: 421 VAQFYRDARILPIYEGTTAIQANDLLG-------------RKVLRDAGQTARRFSAMIAD 467

Query: 490 SISLCKE----DKGLARFLTE-KIALASSAAALYRAGMNDIADVF 529
           + +  +      + +A  L E + A  +S A L     ND    F
Sbjct: 468 TEAALQTGSAKLQDIAARLGEARAAFDASLAWLLETAPNDPRAAF 512


>gi|319785585|ref|YP_004145061.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171473|gb|ADV15011.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 596

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/516 (18%), Positives = 181/516 (35%), Gaps = 65/516 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLH 116
            VL     E A++A      +H     G+     R D   V     +     +    G  
Sbjct: 36  DVLEAILAEGAKLAEN---VMHPLNRVGDMEGCVRHDDGSVTTPKGFREAFDQYREGGWM 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F       A     A   + A +        +  + + +    T      W P
Sbjct: 93  GLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGLTQGAIAAIITHGTDEQKATWLP 152

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++    +  T             + LTE   GTD+  + ++     DG Y +SG K F+S
Sbjct: 153 RMIEGAWTGT-------------MNLTEPHCGTDLGLLRTKAVPNGDGTYKISGQKIFIS 199

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +   D       ++LA++EG       +  F+VP+L  D     G+ N +    ++ K+G
Sbjct: 200 AGEHDMSDNIVHLVLARIEGAPEGVKGISLFIVPKLKLDPSGNPGNRNTVSCGSIEEKMG 259

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              N+T  + +    G LLG+ N     +  M     L   +  +S   ++   A+ YA+
Sbjct: 260 IHGNSTCVMNYDEAEGTLLGEPNGGLKAMFTMMNEARLGVGLQGLSLSEIAYQNAVGYAK 319

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------E 382
            R                  +I  P ++R++  +     A  AL+   A   D      +
Sbjct: 320 DRLQGRSLSGPKAPDKKADPIIVHPDIRRSLMTMKAFNEAGRALALWTAIKSDIAHRSGD 379

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K R     Y  +M P+ K             A +  GG GYIEE  +++  R++    I
Sbjct: 380 DKDRQAADDYTGLMTPVVKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQFVRDARIAMI 439

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDK 498
             G+     LD++   L   G    +  F  + +  +   + +K+    +       + +
Sbjct: 440 YEGANGIQALDLVGRKLGLHGGRAVQAFFKEVGEFCEENRANEKMAPFTKALKKGLNDLQ 499

Query: 499 GLARFLTE-KIA---LASSAAALYRAGMNDIADVFL 530
               +L +  +A    A +A+  Y      +A  ++
Sbjct: 500 AATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYM 535


>gi|91790028|ref|YP_550980.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666]
 gi|91699253|gb|ABE46082.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666]
          Length = 393

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 143/400 (35%), Gaps = 23/400 (5%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L      L R A     Q     P     D+ +  P    L ++    G+       
Sbjct: 8   DFQLGEETDAL-RDAVREFAQAE-IAPRAAELDRNDQFPM--DLWQKMGALGVLGITVGE 63

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        AH +    +   +        + S    + +    T    + + PK+ S 
Sbjct: 64  EYGGAGMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQIKRNGTDAQRQKYLPKLISG 123

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                L ++E   G+D+ ++  + +             W  + P +D
Sbjct: 124 EH-------------VGALAMSEPGAGSDVISMKLKAEDNGGYYLLNGSKMWITNGPDAD 170

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ A+ E  +G   V   L +    G    +  +K+G R + T EL FSN        
Sbjct: 171 TLVVYAKTEPELGARGVTAFLIEKGMKGFSVAQKLDKLGMRGSHTGELVFSNVEVPAQNI 230

Query: 302 LNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L       + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  
Sbjct: 231 LGGLNSGAKVLMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGK 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+   + A  + ++ +A + D     +E A   R        WC + A  +  E ++ 
Sbjct: 291 VADMYTVLQAGRSFAYTVAKNLDM--RGAEHARQVRKDCASVILWCAEKATWMAGEGVQI 348

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG+GYI +  + R +R++    I  G+     + +   L
Sbjct: 349 FGGNGYINDYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 388


>gi|94984919|ref|YP_604283.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555200|gb|ABF45114.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 393

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 138/378 (36%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           PG    D+    P    L+R     G+  +     +  V    A   +    +       
Sbjct: 30  PGAAERDQTGEFP--FELVRELGEMGVMGAQTPEEYGGVGLDTATFAMIIEEIAAYDGSL 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + L  T      + P + S                    GLTE   
Sbjct: 88  CLTVASHNSLCQGHILLAGTAAQKAKFLPDLAS-------------ARKLGAWGLTEPGS 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D   + ++  +  DG + L+G K F++   +   +++LA+ +    G+     +   +
Sbjct: 135 GSDSGGLQTRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDPPRPGKGKNDGISAFV 194

Query: 263 EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
            +     G    R ++K+G RS+ T +L F +        L        + M++L    +
Sbjct: 195 FNRDEVTGFSIGRKEDKLGLRSSDTAQLIFEDVHLPQDALLGERGNAFKDVMRVLDGGRI 254

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               M +   R +   A  YA  R   G  +     +   +AD+   + AA  L  + A+
Sbjct: 255 GIGAMGLGLGRAAFEFAARYALEREQFGKPIAMNQAIGFKLADMDTQLEAARLLLRKAAD 314

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  ++ +  AA A       K +   +      +A++ +GG GYI+E  + R++R++ 
Sbjct: 315 LKDAGENFTVAAARA-------KLFATNVGVQACDDAIQILGGYGYIKEYPVERYWRDNR 367

Query: 439 ANSILLGSGNAMVLDVLN 456
              I  G+     L +  
Sbjct: 368 LTRIGEGTDEVQRLIISR 385


>gi|228908102|ref|ZP_04071950.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228851520|gb|EEM96326.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 569

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 148/395 (37%), Gaps = 32/395 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPVENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
            V  +L K     E   + +E D+ +  +    IL
Sbjct: 404 TVAKMLMKQIEPLED--TEVESDVANVERNHRYIL 436


>gi|158293556|ref|XP_314893.4| AGAP008769-PA [Anopheles gambiae str. PEST]
 gi|157016765|gb|EAA10215.4| AGAP008769-PA [Anopheles gambiae str. PEST]
          Length = 624

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 92/481 (19%), Positives = 178/481 (37%), Gaps = 63/481 (13%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D+  F   W          GL        +  +        R   L   A L  A    +
Sbjct: 99  DEATFQSMW--------EMGLMGMQAPEEYGGLALPNTGYARMGELVGAADLGLAVVFGA 150

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   V L  T    + + P++ +                     LTE   G+D  +
Sbjct: 151 HQSIGWKGVLLYGTEEQKRKYLPQVVTG-------------GTIACFCLTEPSSGSDAGS 197

Query: 214 ITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFL--VPRLLEDGS 266
           I S+  K +DG  Y L+G K ++S    +D F + AQ    + + G     V   + +  
Sbjct: 198 IRSRAVKSADGSHYVLNGSKIWISGGGLADIFTVFAQTEVTDPKTGQKKDKVTAFIVERG 257

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+     ++K+G + + T E+ F +         NV  G     K+ +  L++    +
Sbjct: 258 FGGVTSGPPEDKMGIKCSNTAEVYFDDVKIPA---ENVLGGEGNGFKVAMNILNNGRFGM 314

Query: 326 SG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           SG     M   + +A  +A  R   G  + +   ++  +A +A+    + ++ + ++ + 
Sbjct: 315 SGTLAGTMAHCIRKAAEHATTRVQFGQKIENFGNVQEKLARMAMHQYVSQSMGYMISGNM 374

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +         + A I+K +  + A  V  EA++ +GG+G+++   + +  R+    
Sbjct: 375 DAGHTD------YHLEAAISKIFSSEAAWYVCDEAIQILGGNGFMKSSGLEKFLRDIRIY 428

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISLCKE 496
            I  G+ + + L V L  ++   +  ++L    +    +LG   K+       SI     
Sbjct: 429 RIFEGANDILRLFVTLTGIQYAGSHLKELQRAFKNPTANLGLIFKEGSRRAVRSIGYGGT 488

Query: 497 DKGLARFLT----EKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHC 543
           D  L+ F+     E  AL + +         A L + G   +   FL  R  D+    + 
Sbjct: 489 D--LSTFVVDPLKESAALCADSIDRFSKTIEALLIKHGKGIVDQQFLLIRLADSAIDIYG 546

Query: 544 M 544
           M
Sbjct: 547 M 547


>gi|126735618|ref|ZP_01751363.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126714805|gb|EBA11671.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 378

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 127/377 (33%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W+     P    L  +    G                +            +
Sbjct: 22  EHIAPHARTWETDGTIP--KELWTKLAELGFGGLYVGEDRGGSGLSRLDATLVFEALAQS 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T  +     PK  + E               +   LTE
Sbjct: 80  CASVSAFLSIHNMCARMIDAYGTDALKDRVLPKALTME-------------TILSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  + + G        +      SDA+I++A+     G   +  ++ +
Sbjct: 127 PGSGSDAAALKTKAIRDNAGYQLTGTKAFISGGGYSDAYIVMARTSDD-GPKGISAIIVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              +GL +  L++K+G RS  T +++  N       LLG+  +             L+ A
Sbjct: 186 DGADGLSFGGLEDKMGWRSQPTRQVQMDNCPAPADNLLGEEGMGFKYAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L + + Y   R   G  +     ++  +AD+ + + +A     + A   D
Sbjct: 246 ACSIGAAQSALDQTVAYMAERKAFGKPIDQFQGLQFRLADMEIALQSARTFLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +          A     + K  C +    V  + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 QGAPD------ATKFCAMAKKLCTETGSDVADQCLQLHGGYGYLADYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L     +
Sbjct: 360 ILEGTNEIMRLITARHM 376


>gi|62752841|ref|NP_001015788.1| acyl-CoA dehydrogenase family, member 9 [Xenopus (Silurana)
           tropicalis]
 gi|58477081|gb|AAH89733.1| MGC108374 protein [Xenopus (Silurana) tropicalis]
          Length = 622

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/459 (17%), Positives = 163/459 (35%), Gaps = 48/459 (10%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL        +  +        R   +  +    A  L +        + +         
Sbjct: 106 GLFGMQIPEEYGGLGLSNTMYARLGEITSLDGAIAVTLAAHQAIGLKGILIAGNDEQKAK 165

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           + PK+ S E+                  LTE   G+D A+I ++     DG  + L+G K
Sbjct: 166 YLPKLASGEH-------------IAAFCLTEPGSGSDAASIQTRATLTPDGKHFLLNGSK 212

Query: 233 WFLSSPM-SDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            ++S+   +D F + A+ E           +   + + +  G+ + + ++K+G R + T 
Sbjct: 213 IWISNGGLADIFTVFARTEVVDKDGATKDKISAFIVERAFGGVTHGKPEDKLGIRGSNTC 272

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRR 342
           EL F NT   +   +    G  +    +  L+S   S+           +     YA  R
Sbjct: 273 ELHFENTKVPVENVIGEVGGGFKVAMNI--LNSGRFSMGSASAGMIKKLIEMTGDYACTR 330

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
                 L D  +++   A +A       ++++  A   D             + A + K 
Sbjct: 331 KQFNKRLSDFQLIQEKFALMAEKAFVMESMAYLTAGMMDRPGLPD-----CSVEAAMVKV 385

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           +  + A   ++EA++ +GG GY+++    R  R+S    I  G+   + + +    +   
Sbjct: 386 FSSEGAWLCVSEALQILGGLGYMKDYPYERFLRDSRILLIFEGTNEILRMYIALTGMQHA 445

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-------------CKEDKGLARFLTEK 507
           G  L  ++    + ++G + +     LRDS+                   +  A+ L E 
Sbjct: 446 GRILTGKIKEMKKGNVGVALEMFTKKLRDSLGRKVNLGLTGNEGVVHPSLEESAKKLEEN 505

Query: 508 IALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           +    +   + LYR G   + +     R  D   + + M
Sbjct: 506 VYYFGNTVESLLYRFGKTIVEEQLALKRVADVLINLYAM 544


>gi|332307341|ref|YP_004435192.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332174670|gb|AEE23924.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 606

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/451 (18%), Positives = 169/451 (37%), Gaps = 57/451 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK-VEFHP-AWHALLRRSIH 112
            E       ++    QE A+        L+      G ++D  V   P  + A   + + 
Sbjct: 29  PEFAEATPDLVDAILQECAKFCENELLPLNQSGDKEGCQFDNGVVTTPTGFKAAYNKYVE 88

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRV 170
            G                 +  +  A+  +M        M P ++  +M  +    T   
Sbjct: 89  GGWQSLSHPVEHGGQGLPPS--LGMAKQEMMGTANWSWAMYPGLSHGAMNTIQSHGTQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + +  ++    +  T             + LTE + GTD+  + ++     DG Y + G
Sbjct: 147 KELYLTRLTEGTWTGT-------------MCLTEPQCGTDLGQVKTKAIPNDDGTYDIVG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F+S+   D       I+LA++ G       +  F+VP++  D     G  N +    
Sbjct: 194 TKIFISAGEHDLTENIIHIVLARLPGAPEGTRGISLFIVPKIQVDQQGNLGEGNQVTCGA 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G ++++T  L F N  G L+G  N     +        + +A+  V    ++   
Sbjct: 254 IEDKMGIKASSTAVLNFDNAKGVLIGPKNKGLECMFTFMNTARVGTALQGVCASELAYQN 313

Query: 335 AIHYARR----RHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++ YA+     R ++G          +I  P +++ +           A+ +  A   DE
Sbjct: 314 SLLYAKDRLSMRALTGKKCPDKVADPIIVHPDVRKMLMTQKAISEGGRAMIYYTAKIVDE 373

Query: 383 ------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                  ++R         + PI K +  +M     +  M+  GG GYI+E  + +  R+
Sbjct: 374 IEMAKTEEARKVADDRLGFITPILKAFLTEMGCESTSHGMQVFGGHGYIKEWGMEQIVRD 433

Query: 437 SPANSILLGSGNAMVLDVLN---LLEKGTNL 464
              +++  G+     LD+L    LL +G +L
Sbjct: 434 VRISTLYEGTTGIQALDLLGRKILLTRGKSL 464


>gi|296269777|ref|YP_003652409.1| butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833]
 gi|296092564|gb|ADG88516.1| Butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833]
          Length = 386

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E      A+++R    G         +  V       +             
Sbjct: 29  PHAREWDRREQVD--RAIVKRLGELGFLGLTLPEEYGGVEADMLSYVLVTEELGRGDSAV 86

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S ++   A  +A   T    ++W P++ S E                   LTE   
Sbjct: 87  RGIVSVTLGLVAKTIAAHGTEEQKREWLPRLTSGE-------------ALGCFALTEPGT 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A+++++  +            +  +   +D  +  A+         +   L     
Sbjct: 134 GSDAASVSTRAVRDGGDWVINGAKMFITNGTWADLALTFART----SEKGITAFLVPTDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G     +  K+G R  AT EL F          LG+++   G          +  A  +
Sbjct: 190 PGFRTTEIHGKLGLRGQATAELTFDEVRVPDSARLGEVDRGLGIALGTLSRGRISVAAGA 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ YA  R   G  +    +++  +AD A +I AA AL+ ++A   D   
Sbjct: 250 VGLAQGALDAAVRYATERTQFGRPIASFQLVQELLADSAAEIKAARALTHQVARMVDAGA 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  E A      A I KY+  +MA  V    ++  GG GYI+E    ++ R++   ++  
Sbjct: 310 TPKEYA----TDASIAKYFASEMAVRVANNCLQVFGGYGYIDEYPAGKYLRDARVLTLYE 365

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   L
Sbjct: 366 GTSQIQKLIIGRDL 379


>gi|153004999|ref|YP_001379324.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028572|gb|ABS26340.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 382

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 146/404 (36%), Gaps = 39/404 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  TA+  AR      P                  P    L+      GL       
Sbjct: 9   QQAVQETARRFAR--ERIAPVAAENDRSAR-------FP--RELVHGLGELGLLAVNVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           ++            A      A      + + +      +A   T    + + P + S E
Sbjct: 58  AYGGSGAGAVAYALALMELAAADCATAVIAAVTNMVGETIARFGTEAQRRRFLPPLASGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +             A   GL+E + G+D A++ ++  +  D        +W  S  ++  
Sbjct: 118 W------------AAGAFGLSEPQAGSDAASMRTRAVRRGDVWVLDGEKQWITSGDVAGV 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   V   L +    GL   R + K+G R+++TV L            L
Sbjct: 166 IVVWAKTDPEAGTRGVTAFLVERDAPGLVVGRHEEKMGIRASSTVSLALDGCEVPEAQRL 225

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMK 356
                  E  +I L  LD   + ++       R +L  +  YA+ RH  G  + +   + 
Sbjct: 226 G---PEGEGFRIALAALDGGRVGIAAQATGTIRAALDASRRYAKERHAFGRPIAEHQAVA 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A D  A+  ++ R A   +     + EAA A+++A        + A   ++ A+
Sbjct: 283 FMLADMATDHEASRLMTLRAAALKEAGAPFAREAAMAKLLA-------SEAAQRAVSRAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GY  + S+ + +R++   ++  G+     L V   + +
Sbjct: 336 QIHGGYGYTSDYSVEKLFRDARVQTLYEGTSEIQRLVVAREVLR 379


>gi|300727789|ref|ZP_07061171.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14]
 gi|299774942|gb|EFI71552.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14]
          Length = 510

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/420 (20%), Positives = 154/420 (36%), Gaps = 40/420 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L  +   GL      R +  +         A+ +   A     ++ S        + 
Sbjct: 92  FENLEATRKAGLWGISMPRRYNGLNLPNVVFSMASEIISAADAGFQNVWSLQSC-IDTLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P+I   E               + + LTE   G+D+  +  +  +  D
Sbjct: 151 EFGTEEQRQKYIPRIAEGE--------------TMSMDLTEPDAGSDLQRVMLKATQDED 196

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G  
Sbjct: 197 GTWRLNGVKRFITNGDSDIHLVLARSEEGTHDGRGLSMFIYDKRDGGVDVRHIEHKLGIH 256

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L GD  +     V  +     L  A  SV   + +  EA+ YA+ 
Sbjct: 257 GSPTCELTYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGVEQEAYNEALAYAKE 316

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE-- 389
           R   G  +I  P +   ++ +   + A  +L +  A   D          E K   EE  
Sbjct: 317 RQQFGKKIITFPAVYDMLSRMKAKLDAGRSLLYMTARYVDIYKALEDISRERKLTPEERK 376

Query: 390 -----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                +  A    P+ K    + A     +A+   GGSG+I E    R  R++   SI  
Sbjct: 377 EMKLYSRLADAFTPLAKGTNSEYANQNAYDAVSVHGGSGFIMEYKSQRLLRDARIFSIYE 436

Query: 445 GSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           G+    V+  +  +  GT L       ++      + L +   K++     +I     D+
Sbjct: 437 GTTQLQVVAAIRYITNGTYLNIIKEMLQEEVCDCMKPLQARVAKLVEAYEAAIQKVNADE 496


>gi|159185757|ref|NP_357132.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140891|gb|AAK89917.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 390

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/420 (17%), Positives = 154/420 (36%), Gaps = 40/420 (9%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
           L A F + +  E+  L +   +    ++A +A                 D+ +  P    
Sbjct: 5   LAAIFDADLGPEIAALRDSASAFADDKIAPLATE--------------IDRNDRFP--RQ 48

Query: 106 LLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L  +    GLH       F    +   AH +    +   +        + S    + +  
Sbjct: 49  LWPQMGELGLHGITVSEEFGGADMGYLAHCVAMEEISRASASIGLSYGAHSNLCINQIHR 108

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + PK+ S ++                L ++E   G+D+ ++  + ++  D 
Sbjct: 109 WGTDEQKHRYLPKLVSGDH-------------VGSLAMSETEAGSDVVSMRLKAERKGDR 155

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +   +D  ++ A+ +   G   +   L +    G    +  +K+G R +
Sbjct: 156 YVLNGAKMWITNGHEADTLVVYAKTDMSAGARGITAFLIEKGFKGFRPAQKLDKLGMRGS 215

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341
            T EL F +        L      V  +   +  + A+++   V  M+ ++   + Y R 
Sbjct: 216 PTSELVFEDCEVPEENILGRLNDGVTVLMSGLDYERAVLAAGPVGIMQAAIDLVLPYVRE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +ADI   + A+ A  + +A + D  +   ++AA A        
Sbjct: 276 RKQFGKAIGEFQLVQGKLADIYSAMNASRAYVYAVARACDNGRITRQDAAGA-------I 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +  + A  V  +A++ +GGSGY+ E    R  R++    I  G+     + +   L KG
Sbjct: 329 LFAAERATQVALDAIQLLGGSGYVNESPAGRLLRDAKLYEIGAGTSEIRRMLIGRELVKG 388


>gi|332994472|gb|AEF04527.1| putative acyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 586

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 88/480 (18%), Positives = 175/480 (36%), Gaps = 56/480 (11%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           I++F S +  E+   G          L R  +    +L           K+     +   
Sbjct: 30  ISDFDSELANEIIAQGAKFAIDVVAPLNREGDEEGCKLED--------GKITTPKGFADA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +  + +G +  +    ++         +    +   A L        + ++   V    
Sbjct: 82  YQEYVANGWNAMLGTAEYDGQELPYTMAVPVHEMLNAANLSWRLTTMLTESATLAVTKHA 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S E+  T             + LTE   GTD++ ++++ +   DG Y
Sbjct: 142 SKELKDKYLAKLISGEWTGT-------------MNLTEPHAGTDLSLLSTKAEPQGDGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL-----EDGSPNGL 270
            ++G+K F+++   D       ++LA++         +  FLVP+L+     E G PN L
Sbjct: 189 KVTGNKIFITAGDQDWSSNVIHLVLARLPDAPKGVKGISLFLVPKLMLDENNEPGEPNSL 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++ T  + F +  G+L+G+ N     +  M         +  +     
Sbjct: 249 SVGSIEHKMGIKASPTCVMNFDDATGWLVGEENQGLACMFTMMNDARFQVGLQGLGAAEA 308

Query: 331 SLAEAIHYARRRHVS----------GG--ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   A+ YAR R  S          G    ++ QP + R +      I  + ALS   A 
Sbjct: 309 SYQGALTYARERVQSRAPQGIQNPDGKADPIVFQPDVARMLLTQKSQIEGSRALSLLYAK 368

Query: 379 SFDEAKSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             D  K  ++E         + + PI K +   M     +  ++  GG G+I E  + + 
Sbjct: 369 YMDIEKLGTDEEKENADKVLQFLTPICKAYMTDMGLETTSIGVQVFGGHGFIREWGMEQL 428

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R+     +  G+     LD++   L   G  + E  +    Q +          L   +
Sbjct: 429 MRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQMMEATYQAFAQLVADISDAENKGLAQGL 488


>gi|144898566|emb|CAM75430.1| Butyryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 379

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 141/376 (37%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     LR++   G                +            A    
Sbjct: 26  PHAAHWDEEEIFPV--DALRKAAELGFAGIYVKEDVGGSALTRLDAALIFEELAAACPST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+    +      W P + +              +      LTE   G
Sbjct: 84  AAYISIHNMAAWMIDSFGSDDQRARWLPDLTTM-------------TKFASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ ++ ++     Y L+G K F+S    SD ++++ +  G  G   +  L+ +   
Sbjct: 131 SDAASLRTKAERDG-EYYVLNGSKAFISGGASSDVYVVMVRT-GGPGPKGISCLVVEKGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G +S  T  + F +    +   +     G    MK L    L+    S
Sbjct: 189 PGLSFGKPEKKLGWKSQPTCAVIFEDCRVPVANRIGAEGEGFKIAMKGLDGGRLNIGACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G R  +  A+ Y  +R   G  +      +  +AD+A ++ AA  L  R       A 
Sbjct: 249 LGGARECIRLAVDYTNQRQQFGQAVSAFQNTQFQLADMATELEAARLLLHR------AAA 302

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   + A A  +  + K        +V+  A++  GG GYI+E  I R+ R+   + IL 
Sbjct: 303 ALDAKDANATTLCAMAKRLATDTGFSVVDRALQLFGGYGYIKEYPIERYLRDLRVHRILE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 363 GSNEIMRVIIGRALTQ 378


>gi|259488893|tpe|CBF88712.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_1G14850) [Aspergillus nidulans FGSC A4]
          Length = 439

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 136/381 (35%), Gaps = 28/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      AL+      G+        F          I A       
Sbjct: 78  EQIGPKVREMDEAETMD--PALVEHLFEQGIMGIEIPEEFGGAGMNFTAAIVAIEELARV 135

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+    T  +   +     +V + W PK+               T       L+
Sbjct: 136 DPSVSVLVDVHNTLVNTAFIKWGDAQVQRTWLPKL--------------ATGTVGSFCLS 181

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K +DG        W  +S  +  FI+ A +    G   +   + 
Sbjct: 182 EPVSGSDAFALQTKAEKTADGYKLNGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIV 241

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    G    + + K+G ++++T  L F +     G LLG+          +     +  
Sbjct: 242 EKDTPGFSIAKKEKKLGIKASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGI 301

Query: 321 AIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           A         +   A  Y    R   G ++ +   M+  IA    +IAAA AL +  A  
Sbjct: 302 AAQMTGLALGAWENAAKYVWNDRRQFGQLVGEFQGMQHQIAQAYTEIAAARALVYNAARK 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+S  
Sbjct: 362 KEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKI 414

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +  LL+K
Sbjct: 415 GAIYEGTSNIQLQTIAKLLQK 435


>gi|229011604|ref|ZP_04168788.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
 gi|228749668|gb|EEL99509.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 575

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 156/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 57  IENIEQHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 116

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 117 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 162

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 163 ALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 217

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 218 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENILGEVGKGHHVALNILNFARLKLAFGNI 277

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +++ ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 278 GTAKQAISLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIH 337

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 338 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 397

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 398 RIFEGTNEINRLTVAKMLMKQIEQIEDAEVEIDVANVERNHRYILLAKKLLKQSLKTLSK 457

Query: 497 DKGL 500
             GL
Sbjct: 458 TPGL 461


>gi|163761300|ref|ZP_02168375.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281457|gb|EDQ31753.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 390

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 139/387 (35%), Gaps = 43/387 (11%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-------------RSFEPVVRKQAHKIRA 137
             RW + E  P +    ++ + D    S W+               +       AH+   
Sbjct: 28  ASRWLEAEVVPHYDRYEKQEMVDR---SAWEDAGAAGLLCAAMPEEYGGSGGTYAHEAAI 84

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                    +   +   S   A  +    +    + W PK+ + E             + 
Sbjct: 85  IEALGRTGTDGFGIALHSAIVAPYILHFGSEEQKQKWLPKMATGE-------------LI 131

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCF 256
             + +TE   G+D+  I +  +K  +  Y ++G K F+++       I++++ +   G  
Sbjct: 132 GAIAMTEPGAGSDLQGIKTSAKKDGNH-YVINGSKTFITNGQHANLIIVVSKTDPAKGAK 190

Query: 257 LVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMK 313
               ++ +     G    R  +K+G +SN T EL F +        L      G  + M 
Sbjct: 191 GTSLMVVETDEVEGFRRGRNLDKVGLKSNDTSELFFDDVRIPTANMLGTEEGQGFAQLMT 250

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L  A  ++S +  +LA  I Y + R   G  +ID    +  +A++  +   A  
Sbjct: 251 ELPQERLLIANQAISMIERALAITIDYVKERKAFGKAIIDFQNTQFKLAELKSEAVMARV 310

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                     + +  +  A+ A+ +          +   V  E ++  GG GY+ E  +A
Sbjct: 311 FVNHCVGEHLKGQLSTTTASMAKYLT-------TDLQCKVADECVQLHGGYGYMNEYPVA 363

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R +R++    I  G+   M L +   L
Sbjct: 364 RMFRDARVQRIYGGTNEIMKLLIARSL 390


>gi|62317369|ref|YP_223222.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269345|ref|YP_418636.1| sugar transporter family protein [Brucella melitensis biovar
           Abortus 2308]
 gi|189022621|ref|YP_001932362.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|237816921|ref|ZP_04595913.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|254690868|ref|ZP_05154122.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695821|ref|ZP_05157649.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698649|ref|ZP_05160477.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732096|ref|ZP_05190674.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 4 str.
           292]
 gi|256256053|ref|ZP_05461589.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260544605|ref|ZP_05820426.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756450|ref|ZP_05868798.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260759882|ref|ZP_05872230.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260763120|ref|ZP_05875452.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882272|ref|ZP_05893886.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261216241|ref|ZP_05930522.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297249407|ref|ZP_06933108.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197562|gb|AAX75861.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939619|emb|CAJ12608.1| Sugar transporter superfamily:Acyl-CoA dehydrogenase,
           C-terminal:Acyl-CoA dehydrogenase, central domain
           [Brucella melitensis biovar Abortus 2308]
 gi|189021195|gb|ACD73916.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|237787734|gb|EEP61950.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308
           A]
 gi|260097876|gb|EEW81750.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670200|gb|EEX57140.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260673541|gb|EEX60362.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676558|gb|EEX63379.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260871800|gb|EEX78869.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260917848|gb|EEX84709.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297173276|gb|EFH32640.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 597

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 74/569 (13%)

Query: 12  MNQVHQP-SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M     P  D+ F LN    +   N       L       P VV   L   G  +   T 
Sbjct: 1   MPSYRAPVEDTNFVLNDVLNYQRYN------NLPGFAEAAPDVVEAILSE-GAKLAEGTL 53

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + + A+            G     V     +          G         +      
Sbjct: 54  FPVNQTADREG---CTRHADG----SVTTPKGYKEAYNLYREGGWLGLAVPEQYGGQGLP 106

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNK 188
             + +  A    M+       M P +T  ++ A+    T      + PK+    +  T  
Sbjct: 107 --YLLHTAVGEYMSSANMALTMYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-- 162

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243
                      + LTE   GTD+  + +     +DG Y +SG K F+S+   D       
Sbjct: 163 -----------MNLTEPHCGTDLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIH 211

Query: 244 IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++LA++EG       +  F+VP+ + D     G+ NG+    ++ K+G   NAT  + + 
Sbjct: 212 LVLARIEGAPEGVKGISLFIVPKSILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYD 271

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+G+ N     +  M     L  A+  +S    +   A+ YAR R          
Sbjct: 272 EATGYLIGEANKGLRAMFTMMNEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAV 331

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +I  P ++R + +I     A  AL   +A   D A    +EA          
Sbjct: 332 APEKKADPIIVHPDIRRNLMNIRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVG 391

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K             A +  GG GYIEE+ ++++ R++    I  G+     LD+
Sbjct: 392 LLTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDL 451

Query: 455 LN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           +   L   G       F  + +  +     +K+    +       + +    +L +    
Sbjct: 452 VGRKLALNGGRAITAFFKEVGEFCETNRENEKLSFFTKYLKKGVNDLQAATMWLMQNAMA 511

Query: 511 ----ASSAAALYRAGMNDIADVFLENRFL 535
               A +A+  Y      +A  ++  R  
Sbjct: 512 KPDNAGAASNDYMHLFGLVALGYMWARMA 540


>gi|146278050|ref|YP_001168209.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556291|gb|ABP70904.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
          Length = 385

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 142/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLE 147
           P   R D+    PA   L R     GL        F    +   AH I    +   +   
Sbjct: 31  PMATRIDRENVFPA--ELWREMGDLGLLGITVPEEFGGSDMGYLAHTIAVEEVARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  +P     + P++ S E+                L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIRLNGSPEQQARYLPRLVSGEH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMKLKAEKRNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T EL F +         NV     + +++L+  LD       
Sbjct: 196 KGFSTSPHFDKVGMRGSNTGELIFEDCEVPF---ENVLGAEGKGVRVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    +   L E + Y + R   G  +    +M+  +AD+ + +  A A  + +A + D
Sbjct: 253 GIGTGILSACLDEVVPYCQSRQQFGQPIGSFQLMQGKLADMYVALNTARAYVYEVARACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +AA           +  + A     +A++ +GG+G++ +  ++R +R++    
Sbjct: 313 AGRVTRADAAG-------CVLYASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+     + +   L  G
Sbjct: 366 IGAGTSEIRRMLIGRELMAG 385


>gi|319949102|ref|ZP_08023196.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4]
 gi|319437251|gb|EFV92277.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4]
          Length = 389

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 127/373 (34%), Gaps = 21/373 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     L      G +       +E              +  +A+++A
Sbjct: 33  PHAADVDENERFP--QEALDALNASGFNAVHIPEEYEGQGADS--VAACIVIEEVARVDA 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              + P+V     + L+            +   E       P           L+E+  G
Sbjct: 89  SSSLIPAVNKLGTMGLI------------LAGGEELKQKVLPEIAAGKMASYALSEREAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 137 SDAASMRTRAKADGDDWILNGSKAWITNGGKSTWYTVMAVTDPDKGAGGISAFMVHADDE 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    + + K+G + + T EL F N       ++G+                      +V
Sbjct: 197 GFGVSKTEKKLGIKGSPTAELYFENVRIPGDRIIGEPGTGFKTALQTLDHTRPTIGAQAV 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  AI Y + R   G  + D    +  +AD+A+ + AA  + +  A + +   +
Sbjct: 257 GIAQGALDAAIAYTKERRQFGKAISDFQNTQFMLADMAMKVQAARLMVYTAAANAERGSA 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E      MA  +K +   +A  V   A++  GG+GY  +  + R  R++    I  G
Sbjct: 317 PGGE--KLGFMAAASKTFASDVAMEVTTNAVQLFGGAGYTRDFPVERMMRDAKITQIYEG 374

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 375 TNQINRMVMARQL 387


>gi|307295365|ref|ZP_07575204.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878868|gb|EFN10087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 600

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 168/502 (33%), Gaps = 58/502 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     + A     +  G         F             +   + A          + 
Sbjct: 73  VTTPTGFKAAYDAYVEGGWTTLHAPAEFGGQGLPIVVATAVSEYMVAANQSFKMYDGLTN 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +    + + P + S ++  T             + LTE   GTD+  I +
Sbjct: 133 GAVEALIAKGSDEQKQTYIPNMVSGKWSGT-------------MNLTEPHCGTDLGLIKT 179

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL--E 263
           +    +DG Y ++G K F+S+   D       ++LA+          +  F+VP+ L   
Sbjct: 180 RAVPQADGSYIITGTKIFISAGEHDLTENIIHLVLAKTPDAPEGSKGISLFVVPKFLLNV 239

Query: 264 DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           DGSP   N L    L++K+G   NAT  + +    G+L+G+ N     +  M     L  
Sbjct: 240 DGSPGERNALSCGSLEHKMGIHGNATCVMNYDGATGWLVGEENKGLAAMFIMMNAARLGV 299

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +    ++   A  YA  R                  L   P ++R + +       
Sbjct: 300 GLQGLGQAEIAYQNAALYAHERRQGRALTGPKDLDEKADTLFVHPDVRRMLMEAKALTEG 359

Query: 369 ATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             AL    A   D A      + R       +++ P+ K +       V   A +  GG 
Sbjct: 360 LRALMLWGALQVDLAHHAATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVTAQQVFGGH 419

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS- 479
           GYI E  + +  R++    I  G+     +D++   L   G    +     +  ++  + 
Sbjct: 420 GYIWENGVEQFVRDARIAQIYEGTNGIQAMDLVGRKLAMNGGRALQSFLKIVADEVADAK 479

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENRF 534
           G + +  L +++       G A     + A+     A + A  Y   +  +A   +  R 
Sbjct: 480 GDEKLAPLAEALEKASGQLGAATMWLMQNAMKNPDNAGAGAVHYMHILGIVATGLMWLRM 539

Query: 535 LDNCHSTHCMLHGRFNAAHIID 556
                S   +L      A  ++
Sbjct: 540 AKAATS---LLAAGAEDAPFLE 558


>gi|295690196|ref|YP_003593889.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432099|gb|ADG11271.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 385

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 77/403 (19%), Positives = 150/403 (37%), Gaps = 35/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE       +  AR A           P     D+    P   +L       GLH   
Sbjct: 11  ALGETA-DAIRETTARFA------ADRIAPLAAEIDETNTFP--RSLWVPMGDLGLHGIT 61

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  F  +      H +    +   +        + S    + +    TP   + + PK+
Sbjct: 62  VEEEFGGLGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWGTPEQKRRYLPKL 121

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  + ++  D         W  ++P
Sbjct: 122 ISGEH-------------VGSLAMSEAGAGSDVVSMKLRAEQRGDRYVLNGTKFWITNAP 168

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+     G   +   L +    G    +  +K+G R + T EL F +     
Sbjct: 169 HADTLVVYAKT--GEGTRGITAFLVEKGMKGFSVSKKLDKMGMRGSDTAELVFEDCEIPE 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +    G V  +   +  + A+++   +  M+  L   + Y R R   G  +    +M
Sbjct: 227 DNVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDIVLPYVRDRKQFGQPIGGFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + +++A A  + +A + D  K+   +AA A +MA        + A  V  EA
Sbjct: 287 QGKVADMYVALSSARAYVYAVARACDAGKTTRFDAAGAILMA-------SENAVKVSLEA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 340 IQALGGAGYTKEWPVERLLRDAKLYDIGAGTNEIRRFLIGREL 382


>gi|16081732|ref|NP_394117.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum
           DSM 1728]
 gi|10639812|emb|CAC11784.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum]
          Length = 538

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/474 (21%), Positives = 201/474 (42%), Gaps = 34/474 (7%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           MN +S D +L  ++      +  +L+ +G YV     ++   + +Y  P L  +G    R
Sbjct: 1   MNYFSDDIVLQDVLNYLGYDIDDKLQEMGRYVSEEMIEDSIFIDHYGEPVLQMWGILDNR 60

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D +        ++ R +  G+   I   +                 YL++       ++
Sbjct: 61  TDGIWISRTHQNMIDRLLDMGVVSKIASEND--------LMYHFISGYLISDAGLFCTLT 112

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +A  +      R+ +       S  +                   TE +GG+D+ A
Sbjct: 113 LTGQTAYGLRKYGDARLQQFLNHYANSDHW-------------LGATYYTEIQGGSDLGA 159

Query: 214 ITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGS 266
             +   +  D       +K+F  ++ ++D  I+ A++EG       +  F VP L  DG+
Sbjct: 160 NQTTAVRSGDKYILNGENKYFASNAGLADGAIVTARMEGARPGAKGISVFFVPTLRSDGT 219

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N    +R+K+K+G     T E+   ++ G+LLGD         ++  +  +D AI ++ 
Sbjct: 220 RN-YEIRRIKDKLGTIMVPTGEVVLKDSEGYLLGDEKNGIYIALEILEVSRIDDAIAAMG 278

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA--- 383
             R +L EA  YA +R   G  +ID P+M R +A++  ++ A+T LS   A+ F++A   
Sbjct: 279 IARKALWEAYFYANKRTAFGKPIIDHPLMLRDLAEMESEVEASTVLSMIAADMFNKASHL 338

Query: 384 -KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++   AR    + K      +  V    ME  GG G+++E  + + +R+S   S+
Sbjct: 339 KPPYDDQYHMARAFTHMAKNIASWSSDYVTRYTMEVFGGKGFLKEFPVEKFHRDSIVTSL 398

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             G+ N   LD L +++K   + E++ + +   + +   +   +L+ +    +E
Sbjct: 399 WEGTSNIQALDFLEIVQK-RGIDEKILALVWNIMDNLSSENAAMLKAAFDSVRE 451


>gi|260910060|ref|ZP_05916742.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635828|gb|EEX53836.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 162/434 (37%), Gaps = 45/434 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L  +   GL      R +  +         A+ +   A     ++ S        + 
Sbjct: 92  FENLDATRKAGLWGISMPRRYGGLNLPITPYSMASEMMATADAGFQNIWS-LQDCIETLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-IS 222
                   + + P++   E               + + LTE   G+D+ +   +      
Sbjct: 151 EFGNEEQREKYIPRVCQGE--------------TMSMDLTEPDAGSDLQSAMLKATYSEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG + ++G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G 
Sbjct: 197 DGCWLINGVKRFITNGDSDIHLVLARSEAGTKDGRGLSMFIYDKRQGGVTVRHIENKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + +    L G+  +     V  +     L  A  SV   + +  E ++YAR
Sbjct: 257 HGSPTCELVYKDAKAELCGETRLGLIKYVMALMNGARLGIAAQSVGVSQAAYTEGLNYAR 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEA 390
            R      +ID P +   ++ +   + A  ++ ++ A   D          E K   EE 
Sbjct: 317 ERRQFETNIIDFPAVYDMLSRMKAKLDAGRSILYQTARYVDIYKALDDIARERKLTPEER 376

Query: 391 A-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A        A    P+ K    + A     +A++  GGSG+I E    R YR++   SI 
Sbjct: 377 AEQKKYMRLADAFTPLAKGMNSEYANQNAYDAIQIHGGSGFIMEYKSQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE------- 496
            G+    V+  +  +  GT L   +   LE+D+  S K +   +   +   +E       
Sbjct: 437 EGTTQLQVVAAIRYITNGTYL-GIMKEMLEEDVADSLKSLKERVAKLVERYEESVNNVKE 495

Query: 497 --DKGLARFLTEKI 508
             ++    FL  ++
Sbjct: 496 CGNQDRQDFLARRL 509


>gi|241766354|ref|ZP_04764239.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363501|gb|EER58959.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 396

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 139/395 (35%), Gaps = 22/395 (5%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A  +  Q     P     D+ +  P    + R+    G+        +   
Sbjct: 15  GEDIDALRDAVRDFAQAE-IAPRAAEIDRSDQFPM--DVWRKMGDLGVLGITVPEQYGGA 71

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                AH +    +   +        + S    + +    +      + PK+ S E+   
Sbjct: 72  AMGYLAHMVAMEEISRASAAVGLSYGAHSNLCVNQINRNGSEAQKAKYLPKLISGEH--- 128

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 129 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVY 178

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F+N        L    
Sbjct: 179 AKTEPEMGARGVTAFLIEKGMPGFSIAQKLDKLGMRGSHTGELVFNNVEVPAANVLGGLN 238

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              + +   +  + A+++   +  M+  +   + Y   R   G  + +  +++  +AD+ 
Sbjct: 239 MGAKVLMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMY 298

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A  + ++ +A + D     ++     R        WC + A  +  E ++  GG+G
Sbjct: 299 TVLQAGRSFAYTVAKNLDM--LGTDHVRQVRKDCASVILWCAEKATWMAGEGVQVFGGNG 356

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI E  + R +R++    I  G+     + +   L
Sbjct: 357 YINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 391


>gi|260566169|ref|ZP_05836639.1| acyl-COA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260155687|gb|EEW90767.1| acyl-COA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 338

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 131/355 (36%), Gaps = 23/355 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R +   G+              K+   +        A       +S    +A M+    
Sbjct: 1   MRETGPLGMGGIYVRDDVGGSGLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFG 60

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                + + P++ S E+                  LTE   G+D AA+ ++  +  D  Y
Sbjct: 61  NEEQRQRFLPQLTSMEW-------------LASYCLTEPGSGSDAAALKTRAVRDGDH-Y 106

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            ++G K F+S   S    +     G  G   +  L+      GL +   + K+G  +  T
Sbjct: 107 IVNGAKQFISGAGSTDLYVTMVRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPT 166

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             + F N    +   LGD  V             L+ A  S+ G + + A+A+ Y   R 
Sbjct: 167 RTVIFDNCRVPVENRLGDEGVGFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAERK 226

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     ++  +AD+  ++AA+  L +  A+  D           A   + + K +
Sbjct: 227 AFGQTIDRFQALQFRLADMETELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRF 280

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  V  EA++ +GG GY+ +  I +  R+   + IL G+   M + +   +
Sbjct: 281 VTDTSFNVANEALQLLGGYGYLHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 335


>gi|238062799|ref|ZP_04607508.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884610|gb|EEP73438.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 387

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 124/376 (32%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P   A          H       +                   A   +
Sbjct: 33  PHAAEADETGEFP--KASYDALRSADFHAPHIPVEYGGAGADALATAIVIEEVARACASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L     + + +               P+          L+E   G
Sbjct: 91  SLIPAVNKLGTMPLILAGGEELKRTYL-------------TPVAAGEAMFSYCLSEPEAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++T++  +  D        +W  ++ +S+ + + A  +       +   + + S  
Sbjct: 138 SDAASMTTRAVRDGDHWVLNGVKRWITNAGVSEFYTVFAVTDPTARSKGISAFVVEKSDP 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G+ +   + K+G + + T E+   +        +    TG    MK L    +  A  +V
Sbjct: 198 GVSFGAPEKKLGIKGSPTREVYLDSVRIPADRMIGAEGTGFATAMKTLDHTRVTIAAQAV 257

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y + R   G  + +   ++  +AD+ + + AA  L++  A   +    
Sbjct: 258 GIAQGALDYAKGYVQERRQFGKAVAEFQGIQFMLADMGMKLEAARQLTYAAAGKSERGD- 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A         K +    A  +  +A++ +GG GY  +  + R  R++    I  G
Sbjct: 317 -----ADLTYFGAAAKCFASDAAMEITTDAVQLLGGYGYTRDYPVERMMRDAKITQIYEG 371

Query: 446 SGNAMVLDVLNLLEKG 461
           +     + +   L +G
Sbjct: 372 TNQVQRIVMARQLLRG 387


>gi|183981098|ref|YP_001849389.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M]
 gi|183174424|gb|ACC39534.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M]
          Length = 390

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/399 (20%), Positives = 150/399 (37%), Gaps = 38/399 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q  A  A+          P    WD  +  P    +LR +   G+             
Sbjct: 11  ITQTAAAFAD------KRLAPYALEWDATKHFPV--DVLREAAELGMAAIYCREDVGGSG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++   +R      +A       +S     A M+    T    KDW P++ +        
Sbjct: 63  LRRLDGVRIFEQLAIADPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM------- 115

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFI 244
                        LTE   G+D +A++++  +        Y L G K F+S   + D ++
Sbjct: 116 ------DAIASYCLTEPGAGSDASALSARAVRQGSAPGSDYVLDGVKQFISGAGASDVYV 169

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++A+  G  G   +   + +    GL +  L+ K+G  +  T ++            L  
Sbjct: 170 VMART-GAEGPRGISAFIVEKGTPGLSFGALEEKMGWHAQPTAQVVLEGVRVPADAMLGG 228

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G      I +       L+ A  S+ G + + A+A  Y R R   G  L+D+P ++  
Sbjct: 229 VDGTGAGFGIAMNGLNGGRLNIAACSLGGAQSAFAKAGAYVRERQAFGASLLDEPTVRFT 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + A+  L +R AN+ DE  +   E      +  + K +       V  +A++ 
Sbjct: 289 LADMATGLEASRMLLWRAANALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQL 342

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            GG GY+ E  + +  R+   + IL G+   M + V   
Sbjct: 343 HGGYGYLREYGLEKIVRDLRVHRILEGTNEIMRVVVGRA 381


>gi|218903487|ref|YP_002451321.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|218535100|gb|ACK87498.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++  +    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFTKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|116696491|ref|YP_842067.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113530990|emb|CAJ97337.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 385

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 133/357 (37%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    + +                +   +V   S  + +  T   
Sbjct: 46  EMGLFGISIPENYGGIGLSMSQECDVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P+I S E             + I   LTE   G+D A++ ++ +   D       
Sbjct: 106 KQQYLPRIASGE-------------LIISFALTEPNAGSDAASLQTKAELDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGAGASGISSFIVPADTPGISLGKPDKKMGQRGTKTCDVV 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YAR R 
Sbjct: 212 LENVRVPAANIIGGVPGVGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYARERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   +      ++A  TK +
Sbjct: 269 QFGKPIGDFQLIQAMLADSQAELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E    R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQLIIAKQLLR 384


>gi|78223474|ref|YP_385221.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194729|gb|ABB32496.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 615

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/486 (19%), Positives = 181/486 (37%), Gaps = 59/486 (12%)

Query: 72  ELARMANYN-TPQLHAYGPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           E    AN   +P        G  +D     V F  ++H   ++    G            
Sbjct: 42  EAHTFANTELSPTAVDGDQQGCLYDPKTKAVTFPQSFHKPYQKFCEGGWLTMCDSPDVGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A     + ++             +  +A ++    +    K +  K+F+ E+  T
Sbjct: 102 DGFPSAVGTAVSEVFYACGFYIYGAAELTHAAAKVIEAYGSEEQKKSYMTKLFAGEWMGT 161

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD----- 241
                        + LTE   G+++ A+ +   +  DG Y ++G K F+++   D     
Sbjct: 162 -------------MCLTEPDAGSEVGAVQTVATRNGDGSYAITGTKIFITAGEHDLAGNI 208

Query: 242 AFIMLAQVEGRV------GCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELE 290
             ++LA+V G          F+VP+ L DG       N +    +++K+G     T  + 
Sbjct: 209 IHMVLARVAGDPPGTKGLSLFIVPKFLPDGVGNAGERNDVYCTGIEHKMGLHGLVTCTMA 268

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----- 342
           F +     G+LLG+       +  M     L   +  +S    +   A+ Y + R     
Sbjct: 269 FGDSGKCTGYLLGEQGKGMAEMFHMMNEQRLLVGVEGLSFSTSAFMNAVDYTKSRVQGLS 328

Query: 343 ------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAA 391
                       +I+ P +KR +  +   +    +L++  ++  D     +   R+    
Sbjct: 329 VYPGADKQKSVAIINHPDVKRMLLTMKAYVEGCRSLAYFTSSCMDNAGVADGADRARWQG 388

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ PI K +    A  V A AM+C GG GY  +    R  R+    +I  G+     
Sbjct: 389 LVELLTPIVKAYITDNAWTVTALAMQCAGGYGYCSDYPFERLARDCKVTTIFEGTNGIQA 448

Query: 452 LDVLNLLEKGTN--LFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
           +D++     G N   F  L   ++Q +   +    I++    +   +E  GLAR + E++
Sbjct: 449 MDLMFRKILGNNRVNFNNLLEMIDQTIEKGAADAEISVYAAIVKRARE--GLAR-IVEEM 505

Query: 509 ALASSA 514
           A +S+A
Sbjct: 506 AASSAA 511


>gi|75762983|ref|ZP_00742780.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218897304|ref|YP_002445715.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228900950|ref|ZP_04065163.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
 gi|228965323|ref|ZP_04126415.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74489529|gb|EAO52948.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218543929|gb|ACK96323.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|228794313|gb|EEM41827.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228858648|gb|EEN03095.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 148/395 (37%), Gaps = 32/395 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPVENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
            V  +L K     E   + +E D+ +  +    IL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYIL 436


>gi|117920119|ref|YP_869311.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3]
 gi|117612451|gb|ABK47905.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3]
          Length = 389

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 152/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +  + H   P   + D     P  + +       GL     
Sbjct: 12  LGEEV------DMLRDAVQDFAK-HEIAPIAAKVDHDNAFP--NEIWPVLGGMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  PEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 ANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|13475804|ref|NP_107374.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14026563|dbj|BAB53160.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 583

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 115/554 (20%), Positives = 217/554 (39%), Gaps = 77/554 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEY-VLSCTAQELARMANYNTPQLHAY-GPGGERWDK-- 96
           + L  L+ N   +     + +G+    +    E  R        L+A     G  WD   
Sbjct: 5   APLKDLMFNITHIAPWSGDAMGDLETAAAVLDEFGRFCAEEIAPLNAAGDRIGSHWDGGL 64

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V+  P +     + +  G         F      +A  + AA   ++        + P +
Sbjct: 65  VQTPPGFREAYAKFMDMGWQGLRHPSEFGGHDMPRA--VAAAATEIINAANMSFALCPLL 122

Query: 157 TSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL    +P + + +  K+ S ++  T             + LTE + G+D+A I
Sbjct: 123 TDGAIEALLRFGSPEIQQTYLHKLVSGKWTGT-------------MNLTESQAGSDLALI 169

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL- 262
            ++ ++ ++G Y +SG K F++    D       ++LA+  G       +  FLVP+LL 
Sbjct: 170 RTRAERQANGTYQISGTKIFITYGEHDLAENIIHLVLARTPGAPDGVKGISLFLVPKLLV 229

Query: 263 ----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
               E G+ N L  Q +++K+G R++ T  LEF    GFL+G  N     +  M      
Sbjct: 230 GESGEPGAQNSLRCQSIEHKLGVRASPTCMLEFEGATGFLIGRENAGLEIMFTMMNAARF 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  V+    +   A+ YA+ R               +I  P ++R +A +       
Sbjct: 290 AVGVQGVAIAERAYQMALSYAKTRMQGRPVDGSAFEAVPIIRHPDVRRMLAHMRATTEGG 349

Query: 370 TALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            AL+   A   D A      + R+E  A    + P+ K +C +M+    +  ++  GG G
Sbjct: 350 RALAAAAAGWQDRAQFAATPELRAEALAIGEFLVPLVKGFCTEMSLQTASTGVQIFGGMG 409

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           +IEE  +A++YR++    I  G+      D+L                  +D GS+ +++
Sbjct: 410 FIEETGVAQYYRDARILPIYEGTTAIQANDLLG-------------RKTLRDGGSTARRL 456

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSA-----AALYRAGMNDIADVFLENRFLDNC 538
             ++  + +  ++   LA+ +  +++ A  A     A L      D+   +         
Sbjct: 457 AAMITQTETALRQGSPLAQEIAAQLSCARQAFETVVAHLVAVKPADLNAAY-------AG 509

Query: 539 HSTHCMLHGRFNAA 552
              + ML G   A 
Sbjct: 510 AVPYLMLAGNLVAG 523


>gi|114047887|ref|YP_738437.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7]
 gi|113889329|gb|ABI43380.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7]
          Length = 389

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 153/410 (37%), Gaps = 39/410 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +  + H   P   + D     P  + +       GL     
Sbjct: 12  LGEEV------DMLRDAVQDFAK-HEIAPIAAKVDHDNAFP--NEIWPVLGGMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  PEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 ANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L   T 
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETK 389


>gi|332978732|gb|EGK15426.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 383

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 128/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                 +   G  C+     +        H+         A       M  S   A  + 
Sbjct: 44  REAWNEAGEMGFLCASMPEEYGGGGGNFGHEAAILLAQAQANQAGFGGMVHSGIVAPYIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W PK+ + EY                + +TE   G+D+ AI +   K  D
Sbjct: 104 KHGTEEQRKAWIPKLATGEY-------------VGAIAMTEPTTGSDLQAIKTYAVKDGD 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGN 281
             Y ++G K F+++      I+LA + +   G   V  ++ +     G    R   K G 
Sbjct: 151 D-YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLIVVETDGLEGFERGRNLKKTGL 209

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL FSN        L      G ++ M+ L    L  A+     ++++L   + 
Sbjct: 210 SAQDTSELFFSNVRVPQKNLLGSVEGLGFIQMMQELPQERLIIALTGCGAIKLALELTLD 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +      +  +A++  D  A  AL      +  E K  +         A
Sbjct: 270 YVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVEAMIEGKLTA-------PQA 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  +    VI E ++  GG GY+ E  IAR Y ++    I  G+   M       
Sbjct: 323 SLIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADARVQKIYGGTNEIMKELASRF 382

Query: 458 L 458
           +
Sbjct: 383 M 383


>gi|298242627|ref|ZP_06966434.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555681|gb|EFH89545.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D     P  + L+ +    GL    +   +                +L   L  
Sbjct: 26  PRAEEMDATGQFP--YDLVGKMGQLGLLGLPFPEEYGGAGAD----------FLSYCLAI 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +    V+    +   T+      +     S E       P+         GLTE   G
Sbjct: 74  EEISRGDVSVGITMEAHTSLGATPFYL--FGSEEQKQRYLLPLATGERLWAFGLTEAEAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIMLAQVEGRV-GCFLVPRLLED 264
           +D     ++     DG + ++G K F+++    ++    + A    R  G   +  L+  
Sbjct: 132 SDSGGTRTRAVLKEDGQWHINGSKVFITNAGTNITGGVTITAVTGQRPDGRKEITNLIVP 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G        K+G +++ T  L F          L     G  + M+IL    +  A
Sbjct: 192 KGTPGYVIGNPYKKMGWKASDTRPLSFEECMVPEENILGKRGDGFKQFMQILDAGRVAIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  L EA+ YAR R   G  +     ++  +AD+ ++I  A  + ++ A    
Sbjct: 252 ALSVGLAQACLDEALSYARERKQFGKSISTYQAIQFKLADMDMEIELARLMYYKAAWLHM 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K    EA+ A       K +  + A     +A++  GG G+++E  ++R++R    N 
Sbjct: 312 QGKPYRREASMA-------KLFASETAKRAADQAVQIHGGYGFMDEYPVSRYWRSVKINE 364

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 365 IGEGTSEVQRMLIAKEL 381


>gi|311031801|ref|ZP_07709891.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           m3-13]
          Length = 594

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/460 (17%), Positives = 169/460 (36%), Gaps = 62/460 (13%)

Query: 95  DKVEFH--PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +++E H       LL+ +   GL  +     +      +         +  A   +    
Sbjct: 54  EEIEHHNFDISVKLLKEAGELGLLGADVQEEYGGFGLDKISSSLITEKFSRAGGFSLSYG 113

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     +  + L       + + PK+ S E                   LTE   G+D  
Sbjct: 114 AHVGIGSLPIVLFGNEDQKQRYLPKLSSGEM-------------LAAYALTEPGSGSDAL 160

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +  +   +G  Y L+G K W  ++  +D F++ A+V+G          + +    G+
Sbjct: 161 GAKTTAKLNDEGTHYVLNGEKQWITNAGFADVFVVYAKVDGEH----FSAFIVEREFGGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
                + K+G + ++T  L   +        L  +  G V    IL       A+ +V G
Sbjct: 217 STGPEEKKMGIKGSSTRTLVLEDALVPKENLLGEIGRGHVIAFNILNIGRYKLAVGTVGG 276

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR- 386
            +  +  +  YA +R      +    +++  +A++A+   A  +  +R    F+++  R 
Sbjct: 277 SKRGIELSATYANQRQQFKTPIAKFSLIQEKLANMAVKTYATESSVYRTVGLFEDSMGRL 336

Query: 387 -----------SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                      ++  +   I   + K +  +    V+ EA++  GG G++ E  + R YR
Sbjct: 337 TKEEEKDPNAVAKAVSEYAIECSLNKVFGSETLDYVVDEAVQIHGGYGFMAEYEVERMYR 396

Query: 436 ESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           +S  N I  G+     L V            L L++K  +L E+L   + +++G      
Sbjct: 397 DSRINRIFEGTNEINRLLVPGTYLRKALKGELPLIQKAQSLQEELMMLMPEEVGD----- 451

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523
                    + +++K L +   +KIA+  +     + G  
Sbjct: 452 --------GVLEQEKYLVKN-AKKIAILMTGLVAQKYGKA 482


>gi|297195300|ref|ZP_06912698.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719618|gb|EDY63526.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 383

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/381 (20%), Positives = 142/381 (37%), Gaps = 32/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ E       ++++    G      D  +        H         + 
Sbjct: 22  REITPHVVEWDRAESVD--RGIVKKLGALGFLGLTVDEEYGGSGGD--HLAYCLVTEELG 77

Query: 145 QLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + ++      SV+    A  VA   T    +DW P++ S E                  G
Sbjct: 78  RGDSSVRGIVSVSLGLVAKTVAAHGTEEQKRDWLPRLTSGE-------------ALGCFG 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   + ++      G Y ++G K F+++   +D  ++ A+     G   V  
Sbjct: 125 LTEPGTGSDAGNLITRAVADG-GDYVINGSKMFITNGTWADVVLLFARTNDTPGHKGVSA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--Y 317
            L      GL  + +  K+G R  AT EL   +        L     G    M  L    
Sbjct: 184 FLVPTDTPGLTRRTVHGKLGLRGQATAELVLEDVRVPAAAMLGPEGKGFSIAMSALAKGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A   V   + +L  A+ YA+ R   G  +    +++  ++D+A+D+ AA  L++R+A
Sbjct: 244 MSVAAGCVGIAQAALDAAVGYAKEREQFGRSIAHYQLVQELLSDVAVDVDAARLLTWRVA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D  +  +         A   K +  + A      A++  GG GYI+E  + +  R++
Sbjct: 304 DLIDRGQQFATA-------ASQAKLFASEAAVRSANNALQVFGGYGYIDEYPVGKLVRDA 356

Query: 438 PANSILLGSGNAMVLDVLNLL 458
              ++  G+     L +   L
Sbjct: 357 RVMTLYEGTSQIQKLIIGRAL 377


>gi|118465062|ref|YP_883553.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           104]
 gi|118166349|gb|ABK67246.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium
           104]
          Length = 386

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 144/380 (37%), Gaps = 30/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  E  P    +LR S   G+              ++   +R      +A
Sbjct: 21  KRLAPHALEWDAAEHFPV--DVLRESAELGMAAIYCREDVGGSGLRRLDGVRIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    TP   K W P++ +               V     LTE
Sbjct: 79  DPTTAAFLSIHNMCAWMIDSYGTPEQRKGWVPRLAAM-------------DVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA++++  +   G Y L G K F+S   + D ++++A+  G  G   +   + 
Sbjct: 126 PGAGSDAAALSTRAVRQG-GDYVLDGVKQFISGAGASDVYLVMARTGGE-GPRGISAFVV 183

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
           +    GL +   + K+G  +  T ++            L  + G      I +       
Sbjct: 184 EKGSAGLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A
Sbjct: 244 LNIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D       E      +  + K +       V  +A++  GG GY+ E  + +  R+ 
Sbjct: 304 GALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDL 357

Query: 438 PANSILLGSGNAMVLDVLNL 457
             + IL G+   M + +   
Sbjct: 358 RVHRILEGTNEIMRVVIGRA 377


>gi|125777102|ref|XP_001359495.1| GA18485 [Drosophila pseudoobscura pseudoobscura]
 gi|54639239|gb|EAL28641.1| GA18485 [Drosophila pseudoobscura pseudoobscura]
          Length = 411

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 136/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   HPA    +RR    GL        +                        
Sbjct: 54  PRARQHDREGLHPA--EQIRRLGELGLMAVTVREEYGGSGLDYQAYAIGMEEVARGDAAV 111

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M  +      V L  + +  +D+               P  +        L+E   G
Sbjct: 112 SVAMGVNNLFLGAVQLHGSEQQKQDFL-------------VPYTQGEKIAFYALSEPGNG 158

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +A ++  +   +         W  +S  +   ++ A ++  +    +   L      
Sbjct: 159 SDASAASTTAKLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHKGITAFLTAKDVP 218

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G R+++T +L   +          V  GP E  KI +  LD   + ++ 
Sbjct: 219 GLSVGKKESKMGMRASSTCQLVLDDVQVPQCQ---VLGGPGEGFKIAMQSLDCGRIGIAA 275

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D 
Sbjct: 276 QATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTWRAAWLKDN 335

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A++ A     +C         +  + +GG GY  +     +YR +    I
Sbjct: 336 GLPITKEAAMAKLHASEAATYC-------AHQCTQILGGMGYTTDLPAEMYYRNARVTEI 388

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N + +
Sbjct: 389 YEGTSEIQRIVIANAVLR 406


>gi|308048711|ref|YP_003912277.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307630901|gb|ADN75203.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 387

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 146/408 (35%), Gaps = 34/408 (8%)

Query: 61  LGEY-VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           LG +        ++ R A     Q     P     D+    P  + L  +    GL    
Sbjct: 3   LGRFNFGLGETVDMLRDAVREFAQ-GEIAPRAADIDRENAFP--NELWPQLGEMGLLGIT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               +        AH +    +   +        + S    + +           + PK+
Sbjct: 60  APEQYGGADMGYLAHVVAMEEISRASASVGLSYGAHSNLCVNQIVKNGNDDQRARYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S ++                L ++E   G+D+ ++    +K  D         W  + P
Sbjct: 120 VSGQH-------------IGALAMSEPGAGSDVVSMKLTARKQGDKYILNGNKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +     
Sbjct: 167 DAHTYVIYAKTDPDAGSKGITAFIVERDFPGFSQAQKLDKLGMRGSNTCELVFEDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQ 352
               N+  G    +K+L+  LD   + +SG     M  ++   + Y  +R   G  + + 
Sbjct: 227 ---ENILGGEGNGVKVLMSGLDYERVVLSGGPLGIMAAAMDAVMDYVGQREQFGQAIGNF 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  +AD+     AA +  + +A + D  ++  ++AA A         +  ++A  + 
Sbjct: 284 QLVQGKMADMYTRANAARSYVYTVAAACDRGETTRKDAAGA-------ILYSAELATQIS 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++ +GG+GYI E    R  R++    I  G+       +   L  
Sbjct: 337 LDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRWLIGRELMN 384


>gi|282936142|gb|ADB04328.1| putative acyl-CoA dehydrogenase [bacterium enrichment culture clone
           N47]
 gi|308274024|emb|CBX30623.1| Probable acyl-CoA dehydrogenase yngJ [uncultured Desulfobacterium
           sp.]
          Length = 381

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 134/373 (35%), Gaps = 26/373 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  E W+K E  P     +R+    G   S +   +          I  A     A L 
Sbjct: 25  TPFAEEWEKNEVFP--RETIRKMGGLGFFASPFPEQYGGTELGFLANIIVAEELGRASLG 82

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  L   S T    + L       + + P I S E             +     +TE  
Sbjct: 83  LACCLNMQSGTCPMTLLLNGNEEQKEKYLPGIISGE-------------LLGCFAVTEPN 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
             TD+A I ++  K  D         W   S + D  I  A+ +       +   + +  
Sbjct: 130 AATDVAGIATKAIKDGDHYILNGSKMWITHSSVFDVGICFAKTDPSQRHKGLSAFIIEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+     KNK+G RS+ T ++ F +       L+G+        E        + A  
Sbjct: 190 MPGMTGMAEKNKLGVRSSDTGQIVFEDVRVPKENLIGEEGQGFKIAESALTYGRANIAGR 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   + ++  A+ YA  R   G  +    + K+ IAD+  +I A+  L +R A   D+ 
Sbjct: 250 SLGIGQAAVDAALKYANEREQFGQKIGFFQMNKQIIADMVAEIEASRLLVYRAAWLQDQK 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S E+        I K++  + A   +  A +  G   Y  E  +AR YR+    +  
Sbjct: 310 RPSSNES-------TIAKFYASEAAVRAVIGAAKIHGAYTYSSEYPVARLYRDVMLMTAG 362

Query: 444 LGSGNAMVLDVLN 456
            G+ N   L + N
Sbjct: 363 EGTSNIQRLIIAN 375


>gi|163854671|ref|YP_001628969.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258399|emb|CAP40698.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 382

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 132/371 (35%), Gaps = 32/371 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSV 156
           E  P   A +R     GL        +  +      ++R    L   +        +   
Sbjct: 35  EIPPDIVAEMR---ELGLFGLSISPDYGGLGLTMEEEVRVVFELGQTSPAFRSLAGTNIG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  + L  T      + PK+ S E             +     LTE   G+D  ++ +
Sbjct: 92  IGSQSIVLAGTDEQRSHYLPKLASGE-------------LIGSFALTEPDAGSDAMSLRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
              +  D        ++  ++P++  F ++A+         +   L D    GL   +  
Sbjct: 139 SAVRDGDHYVLNGTKRFITNAPVAGLFSVMARTAPERKASSISCFLVDAGTPGLTLGKPD 198

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE- 334
            K+G     T ++ F N        L    G     +  +  LD   + +S + V +AE 
Sbjct: 199 KKMGQAGALTCDVVFDNCRVPATALLGGEEGT--GFRTAMRVLDKGRLHISALCVGIAER 256

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A+ YA  R   G  + +  +++  IAD   ++ AA ++    A   D  ++ + EA
Sbjct: 257 LVRDAVKYATERKQFGQPIAEFQLVQAMIADSQAELYAARSMVLDAARKRDRGENTTLEA 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K +  +M   V   A++  GG+GYI E ++ R YR+     I  G+    
Sbjct: 317 A-------CCKLYATEMVGRVADRAVQIHGGAGYISEYAVERFYRDVRLFRIYEGTSQIQ 369

Query: 451 VLDVLNLLEKG 461
            L +     K 
Sbjct: 370 QLVIARETIKA 380


>gi|110679512|ref|YP_682519.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109455628|gb|ABG31833.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 382

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/374 (20%), Positives = 142/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+     P   AL  +    GL               +           MA    
Sbjct: 26  PFAQEWEAAGTIP--KALWPKVAELGLAGIYVSEEHGGSGLSRLDATLVFEALAMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S       M+    +  +   W PK+ + E                   LTE   G
Sbjct: 84  GSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCTME-------------TVFSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ Q+ + G Y L+G K F+S    SD ++ + +  G  G   +  +L +   
Sbjct: 131 SDAAALRTRAQRSNSG-YVLNGTKAFISGGGYSDVYLTMVRT-GDAGPKGISAVLIENGR 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L+NK+G R+  T +++F +       L+G                 L+ A  +
Sbjct: 189 EGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGQEGQGFAYAMAGLDGGRLNIAASA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L  A+ Y   R   G  L     ++  +AD+ + +  A     + A+  D   
Sbjct: 249 LGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQTARIFLRQAASKLDA-- 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +AA A     + K +   +A  V  +A++  GG GY+ +  I +  R+   + IL 
Sbjct: 307 ----KAADATKYCAMAKLYVTDVAFDVANQALQLHGGYGYLADYGIEKIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   +
Sbjct: 363 GTNEVMRVIISRQM 376


>gi|229074975|ref|ZP_04207980.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
 gi|228708148|gb|EEL60316.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEKHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAILNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEATEVEIDIATVERNHRYILLAKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|307320678|ref|ZP_07600091.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893713|gb|EFN24486.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 598

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/542 (19%), Positives = 191/542 (35%), Gaps = 90/542 (16%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            + +    E A++A     P   +    G        V     +          G     
Sbjct: 36  DMTAAILGEAAKLAEEVLFPINLSGDQEGCKRHEDGSVTVPKGFKEAYDLYREGGWLGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               F        + +  A    M+      +M P +T  ++ A+    +    + + PK
Sbjct: 96  APEEFGGQGLP--YTLHTAVGEFMSAANMSLMMYPGLTQGAIAAILVHGSEEQKRAYLPK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   GTD+  + ++     DG Y +SG K F+S+
Sbjct: 154 MVDGTWTGT-------------MNLTEPHCGTDLGLLRTKAAPNGDGSYSISGQKIFISA 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGN 281
              D       ++LA++EG       +  F+VP+       E G  NG+    +++K+G 
Sbjct: 201 GEHDMAENVVHLVLARIEGAPDGVKGISLFIVPKFKLDASGEPGERNGVSCGAIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + +    G+L+G  N     +  M     L   +  +S   V+   A  YAR 
Sbjct: 261 HGNATCVMNYDEATGYLIGTENKGLSAMFVMMNEARLAVGMQGLSIAEVAYQNAASYARE 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEA 383
           R                  +I  P ++R +  I        A +        +A+  D  
Sbjct: 321 RIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSE 380

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R        +M PI K             A +  GG GYIEE  ++++ R++    I 
Sbjct: 381 EERQTADDILSLMTPILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIY 440

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     LD++                  +   + G+ V+ + ++    C+E++G    
Sbjct: 441 EGANGIQALDLVG----------------RKLAMNGGRAVMALFKEIGDFCEENRG---- 480

Query: 504 LTEKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAHIIDSL 558
             EK++  + A    + G+ND+      F++N     DN         G  +  H+   +
Sbjct: 481 -DEKLSGYTKA---LKKGLNDLQAATMWFMQNAMAKPDNAG------AGSTDYMHLFGLV 530

Query: 559 YL 560
            L
Sbjct: 531 VL 532


>gi|265992225|ref|ZP_06104782.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263003291|gb|EEZ15584.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 392

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVSYVHERKQFDQPIGEFQLMQCKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAMAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|194291322|ref|YP_002007229.1| acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225226|emb|CAQ71168.1| putative Acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 395

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/423 (21%), Positives = 158/423 (37%), Gaps = 45/423 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL A     ++++LE+  + V     +ELA              P   RW +  +     
Sbjct: 9   ALAARQTPWMNEDLEMFRDTVRRFVERELA--------------PNEARWAEQGYID--R 52

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + RR+   GL C+     +       AH+    +    A   +      S   A  +  
Sbjct: 53  DVWRRAGQIGLLCASIPEEYGGGGGTFAHEAIITQEMSRAVCTSLGNNVHSGIVAHYLLR 112

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--- 221
             T    + W P++ S E             +   + ++E   G+D+ AI ++  +    
Sbjct: 113 YGTEAQKQKWLPQMASGE-------------LVAAIAMSEPGAGSDLKAIRTRALREQTP 159

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKI 279
               Y ++G K F+++   +D   ++A+ +   G   V  ++ +     G    R+  KI
Sbjct: 160 DGDCYRINGAKTFITNGYHADLICVVAKTDPEAGSRGVSLVMVETRDLPGFRRGRILEKI 219

Query: 280 GNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           G +   T EL F +        L      G  + M+ L    +  A+ +V+ M+ ++   
Sbjct: 220 GQKGQDTAELFFDDVVVPCSNLLGTQEGQGFYQLMQQLPQERMIIALGAVATMQRAIELT 279

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y R+R V G  L D    +  +A+       A       A   D+   R  +      
Sbjct: 280 TEYVRQRKVFGQPLGDLQNTRFKLAECKTVTTIA-------ATFVDDCMQRLMDGQLDAA 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K+WC +    VI E ++  GG GY+ E  IAR Y  +  + I  GS   M   V 
Sbjct: 333 TAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEIMKELVA 392

Query: 456 NLL 458
             L
Sbjct: 393 RTL 395


>gi|86751704|ref|YP_488200.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574732|gb|ABD09289.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 596

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/479 (20%), Positives = 179/479 (37%), Gaps = 58/479 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            V      E AR++      L+A     G        V     +    ++    G     
Sbjct: 36  DVRDAIINEAARLSEQVLAPLNAVGDREGCVRHDDGSVTTPKGFKEAYKQIAEGGWLGLS 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F             A   + A +        ++ +A+ + +         + PK+ 
Sbjct: 96  SPPEFGGQGLPVTLTQTVAEFQISANMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMT 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E+  T             + LTE + GTD+  + ++  K +DG Y ++G K F+S+  
Sbjct: 156 AGEWTGT-------------MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGE 202

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++EG       V  F+VP++L +     G+ NG+    +++K+G   
Sbjct: 203 HDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNADGSLGARNGVMCGSIEHKMGIHG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + + +  G+L+G+ N     +  M     L  A+  ++   V+   A+ YAR R 
Sbjct: 263 NATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKS 385
                            +I  P ++R +  I     AA AL         +A+  D+AK 
Sbjct: 323 QGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKE 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R     +  +M P+ K     +  +    A +  GG GYI    + +  R++    I  G
Sbjct: 383 RQIADDHLGLMTPVLKGVLTDVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEG 442

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLCKED 497
           +     LD++   L   G       F+ +       G     K  +T L  S+S  ++ 
Sbjct: 443 ANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGGDEAMKPFVTPLSTSLSHLQQA 501


>gi|257455069|ref|ZP_05620312.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
 gi|257447541|gb|EEV22541.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus
           SK60]
          Length = 597

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 87/491 (17%), Positives = 167/491 (34%), Gaps = 56/491 (11%)

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R++   V     +    ++    G      D  F       +     + +   A 
Sbjct: 61  DEEGCRFENGNVYTPKGFKEAYKQYCELGFPSLCADEEFGGQGMPLSLGSAVSEMVGTAN 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                    S  +   +    T    + +  K+ S E+  T             + LTE 
Sbjct: 121 WSFSMYPGLSEGAIRTLEHHGTDEQKQKYLLKLVSGEWTGT-------------MCLTEA 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
             G+D+    ++ +   DG Y ++G K F+S+   D       I+LA++ G       + 
Sbjct: 168 HAGSDLGITRTKAEPNEDGSYAITGQKIFISAGEHDMADNIVHIVLARLPGAPAGTKGIS 227

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP+   +     G  N +    +++K+G +++AT  L F    G+L+G  N     +
Sbjct: 228 LFIVPKFNVNEDGSIGERNTVTCGSIEHKMGIKASATAVLNFDKAKGYLIGPENKGLNCM 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKR 357
                   + +AI  ++   ++    + YA+ R                  +I  P ++ 
Sbjct: 288 FTFMNTARIGTAIQGLTAAELAFQGGLSYAKDRLAMRALSGAKAPEQVADPIIVHPAVRN 347

Query: 358 AIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +           AL + L+   D     E +S++        + PI K +  +      
Sbjct: 348 MVLTCKAFAEGGRALVYYLSQFSDVVTKGEGESQAYADQMLSFLTPIAKAFLTETGYEAA 407

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFS 470
              ++  GG G+I E  + ++ R++    I  G+     LD+L     G    +      
Sbjct: 408 NHGVQVYGGHGFIREWGMEQNVRDTRIACIYEGTTEIQSLDLLGRKVLGSQGKMLANFSK 467

Query: 471 TLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFL----TEKIALASSAAALYRAGMND 524
            + Q  +       +   +R    L KE   L   +    TE      +AA  Y      
Sbjct: 468 VIYQFCEENKDNDAMGEFIRPLARLNKEWGDLTARIGMQATENPDAVGAAAVDYMYYSGY 527

Query: 525 IADVFLENRFL 535
           I   +L  R  
Sbjct: 528 ITLAYLWARMA 538


>gi|293611086|ref|ZP_06693385.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826738|gb|EFF85104.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 600

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 86/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQALPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSDEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIIHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|254471938|ref|ZP_05085339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062]
 gi|211959140|gb|EEA94339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062]
          Length = 598

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/504 (18%), Positives = 173/504 (34%), Gaps = 66/504 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGE-RWDK--V 97
           LL  ++                 ++    +E A+ +      L+      G  R D   V
Sbjct: 14  LLKDVLGYEKHSNLPGFAEATPDLVEAILKEGAKFSEEIVQPLNQSGDKIGCTRHDDGTV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P +    +  +  G         +          +       +        M P +T
Sbjct: 74  TTPPGFKEAYQSYVEAGWGGLSIPEQYGGQGMPA--TLSVILNEYLCSANQAFAMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           + +M AL       +   + PK+ + E+  T             + LTE   GTD+  + 
Sbjct: 132 AGAMAALLVHANDEIKNTYLPKMVTGEWTGT-------------MNLTEPHCGTDLGMLR 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLED----- 264
           ++     DG Y +SG K F+S+   D       ++LA++EG   G   +   +       
Sbjct: 179 TKAAPQGDGSYKISGTKIFISAGDQDLSENIVHLVLARIEGAPEGTKGISLFVVPKKKLD 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  NG+    ++ K+G   NAT  + +  + G+L+G+ N     +  M     L 
Sbjct: 239 ADGNPGEMNGVSVGSIEEKMGIHGNATCVMNYDESVGYLVGEENKGLRAMFVMMNEARLG 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIA 367
             I  ++   V+   A+ YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGIQGLAQSEVAYQNAVTYAKDRIQGRSLTGPKNPEKQADPIIVHPDVRRVLMTIRSFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    +   D +    ++A          ++ P+ K             A +  GG
Sbjct: 359 AARALYMWTSLHGDVSHLSQDDAEKQASDDIMGLLTPVVKGVLTDKGFDNTVMAQQLYGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL------- 472
            GYI+E  + +  R++    I  G+     LD++   L   G    +  F  +       
Sbjct: 419 HGYIQEWGMEQFVRDARIAMIYEGANGVQALDLVGRKLPANGGRAIQAWFKEVGAFIKEH 478

Query: 473 --EQDLGSSGKKVITILRDSISLC 494
             +++LG   K +   L+D  +  
Sbjct: 479 EGDEELGVYMKGLKQSLKDLQAAT 502


>gi|84686414|ref|ZP_01014308.1| isovaleryl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665597|gb|EAQ12073.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 387

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 136/378 (35%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA   L +     GL        +        AH +    +   +   
Sbjct: 31  PLAADIDQTNDFPAH--LWKEMGDLGLLGITVSEEYGGAGMGYLAHTVAVEEIARASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  T    + + P + S +                 L ++E   
Sbjct: 89  SLSYGAHSNLCVNQIKLNGTEEQKRRYLPGLISGDQ-------------VGALAMSEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +          W  + P +D  ++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMQLRAEKKNGYFTLNGSKFWITNGPDADTLVVYAKTDPDAGSKGITAFIVEKDM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
            G       +K+G R + T +L F +         N+     +  K+L+  LD       
Sbjct: 196 KGFSTSPHFDKLGMRGSNTAQLFFEDVDVPF---ENILGEEGKGAKVLMSGLDYERVVLS 252

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +    M   L E + Y   R   G  + D  +M+  IAD+   + +A A  + +A + D
Sbjct: 253 GIGTGIMAACLDEVMPYMVERKQFGQAIGDFQLMQGKIADMYTKMNSARAYVYEVAKACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   ++AA           +  + A  V  +A++ +GG G++ E  ++R +R++    
Sbjct: 313 RGEVTRQDAA-------ACVLYASEEAMTVAHQAVQAMGGMGFMNETPVSRIFRDAKLME 365

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+     + V   L 
Sbjct: 366 IGAGTSEIRRMLVGRELM 383


>gi|326795540|ref|YP_004313360.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
 gi|326546304|gb|ADZ91524.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
          Length = 582

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/474 (18%), Positives = 172/474 (36%), Gaps = 50/474 (10%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHDGL 115
           E L + +L     E A+++      L+      G   R  +V     +    R  +  G 
Sbjct: 30  EPLSQDLLEAILTESAKLSEQIIAPLNWSGDQQGAELREGEVYEAEGFKEAFRSYVEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                D  +                   A L        S  +   +    +  +   + 
Sbjct: 90  ASLSGDEVYGGQGLPSTLATAVNEGIQSANLAFSLCPLLSNGAIEALEKYGSQLLKDTYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE   G+D+AAI ++     D    + G K F+
Sbjct: 150 EKLVSGEWTGT-------------MNLTEPNAGSDLAAIRTKATPHEDHF-LIQGQKIFI 195

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +            ++LA++         +  F+VP+ L D     G  N +    L++K+
Sbjct: 196 TWGDHQMSENIVHLVLARLPDAPEGVKGISLFVVPKFLVDENGALGRRNDVSVASLEHKM 255

Query: 280 GNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  ++ T  + F   S   G+L+G+ N     +  M         +  ++    +  +A+
Sbjct: 256 GIHASPTCVMAFGETSGAVGYLVGEPNQGLKAMFAMMNNARQGVGLQGLAIAERAYQQAL 315

Query: 337 HYARRRHV-------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AK 384
            YA+ R         +   ++  P +KR +  +   I A+  L +  A   D        
Sbjct: 316 EYAQERVQGYDSSRKNRVAIVAHPDVKRMLMTMKSLIDASRLLIYVAAVENDVSKLAVGD 375

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A    +  P+ K W  ++A  V + A++  GG G+IEE  +A+H R++    I  
Sbjct: 376 QAKTAAELTALYTPVVKGWITEIAQEVTSLAVQVHGGMGFIEETGVAQHARDARILPIYE 435

Query: 445 GSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           G+     +D++     G N      L + +  D+ +S  K    +   ++L K+
Sbjct: 436 GTNGIQAIDLIGRKLLGDNASAMATLINQIVADVHASQSKYSEAVLSEVALFKQ 489


>gi|328950047|ref|YP_004367382.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328450371|gb|AEB11272.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 381

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 132/365 (36%), Gaps = 32/365 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           W  L R+    GL       ++            A      A      ++S +      +
Sbjct: 38  WPQL-RKMAELGLLGMTTPEAWGGAGLDTVTWALAMEEIAAADPSVAVILSVTSGLPQYM 96

Query: 163 AL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
            L   T    + +   +   E+                  LTE   G+D A++  + +++
Sbjct: 97  LLKFGTDAQKEKYLRPLAQGEW-------------IGAFCLTEPHAGSDPASLKLRAERV 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  S   +  ++++A+  G  G   +   L +    GL + + + K+G 
Sbjct: 144 DGGYVLNGVKSWITSGGQAQLYVVMARTGGE-GARGITAFLVEKDTPGLSFGKPEEKMGL 202

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH--- 337
            +  T E+ F   F     + N        +K  L  LDS  + ++   V +A A +   
Sbjct: 203 HAAHTTEVRFDEVFVP---EENRLGEEGMGLKYALSGLDSGRIGIAAQAVGIARAAYEIA 259

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R   G  L     +   +AD+A  I AA  L    A   D     S+EA+ A  
Sbjct: 260 RDYADERTQFGQKLRAFEGVSFKLADMATRIEAARLLLLNAAARKDRGLPFSKEASMA-- 317

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A  V  +A++ +GG GY  E  + R+YR++    I  G+     + + 
Sbjct: 318 -----KLFASETAVEVTRQAVQILGGYGYAREYRVERYYRDAKITEIYEGTSEIQRIVIS 372

Query: 456 NLLEK 460
             + +
Sbjct: 373 REIYR 377


>gi|221200448|ref|ZP_03573490.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
 gi|221206128|ref|ZP_03579142.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221174140|gb|EEE06573.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221179789|gb|EEE12194.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M]
          Length = 411

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 141/398 (35%), Gaps = 35/398 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD+    P   A++ +    GL   I  +      
Sbjct: 41  EDQRMIRDAARAFAT-EVLAPNAAQWDRDAQLPD--AVVAQLGELGLLGMIVPQELGGSY 97

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W             
Sbjct: 98  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPEQKARWL------------ 145

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    V     LTE + G++   + ++ + + DG + L+G K F+++   +   I+ 
Sbjct: 146 -GDMAAGRVIGAFCLTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVF 203

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   L      G    + + K+G R++ T  +   N     + + N+  
Sbjct: 204 AMTDPDAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITLENC---AIPEENLLG 260

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              E +KI +       +  A  ++   R +  +A  YA  R   G  L +   +++ +A
Sbjct: 261 NRGEGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLA 320

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ I AA  L    A           E       A   K +  +MA  V ++A++  G
Sbjct: 321 DMAVQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLYASEMAERVCSDAIQIHG 373

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY+ +  + RHYR++    I  G+     + +   L
Sbjct: 374 GYGYLVDYEVERHYRDARITQIYEGTSEVQRMVIARQL 411


>gi|300773910|ref|ZP_07083779.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760081|gb|EFK56908.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 389

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 143/377 (37%), Gaps = 30/377 (7%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L       E+ ++++    W  +       G     +  ++  +     +        + 
Sbjct: 26  LPHIDRW-EKDNQIDKS-IWKKM----GDMGFLGLNYPEAYGGLDLDFYYS------MIF 73

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +  +         SA ++  M+ P     +  K  S E        +    +   + +T
Sbjct: 74  CEELSYCYSGGFTISALVIQYMSAP-----YLLKYASEELKQRYLTGVIAGDLVSAVAIT 128

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL 262
           E   G+DI  I +   +  D  Y ++G K F+++    D FI   + +       +  LL
Sbjct: 129 EPGAGSDIQHIKTTAVREGD-YYIVNGSKTFITNGYYGDFFITAVKTDPSKKSKGISLLL 187

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            D +  G+   ++ NK+G  ++ T EL F         L+G+     G +     L  L 
Sbjct: 188 IDRNTPGVSAHKI-NKMGWHASDTAELGFDQVKVPVSHLIGEEGAGFGYLMGGLQLERLT 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +AI S+S    +L   + Y  +R   G  L+D  V++  IA +  DIA   A  +   + 
Sbjct: 247 AAIQSISTADSALQYTLAYIDKREAFGKKLMDFQVLRHRIAQMVADIATTKAFVYHCCDL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                       YA     I K    ++A  ++ E ++  GG G+ E+  I+R YR+   
Sbjct: 307 QQRGD-------YAVQECSIAKLQSSELAIKIVHECLQLFGGYGFTEDYKISRLYRDVRV 359

Query: 440 NSILLGSGNAMVLDVLN 456
            +I+ G+   M   +  
Sbjct: 360 GTIIGGTSEIMREIIAK 376


>gi|192289313|ref|YP_001989918.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283062|gb|ACE99442.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 596

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/455 (20%), Positives = 168/455 (36%), Gaps = 59/455 (12%)

Query: 69  TAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLHCSIWD 121
              E AR++      LH     G+     R D   V     +    ++    G       
Sbjct: 41  IINEAARLSEE---VLHPLNAVGDHEGCTRHDDGSVATPKGFKDAYKQIAEGGWMGLSSP 97

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +                   A +        ++ +A+ + +  +P   + + PK+ S 
Sbjct: 98  AEYGGQGLPITLTQTVQEFLNSANMAFAMYPGLTMGAAAALTVHGSPEQKQTYLPKMVSG 157

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+  T             + LTE + GTD+  + ++  K +DG Y ++G K F+S+   D
Sbjct: 158 EWTGT-------------MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHD 204

Query: 242 A-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++EG       +  F+VP+ L +     G+ NG+    +++K+G   NA
Sbjct: 205 MADNIIHLVLARIEGAPAGIKGISLFVVPKFLVNPDGTVGARNGVMCGSIEHKMGIHGNA 264

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + +    G+L+G+ N     +  M     L  A+  ++   V+   A+ YAR R   
Sbjct: 265 TCTMNYDGATGWLVGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVEYARERLQG 324

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRS 387
                          +I  P ++RA+  +     AA AL    A   D      +AK R 
Sbjct: 325 RALSGPKATDKPADPIIVHPDIRRALLTMRAFNEAARALVLWTALKSDVAHRSSDAKERQ 384

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
               +  +M P+ K        A    A +  GG GYI    + +  R++    I  G+ 
Sbjct: 385 TADDHLGLMTPVLKGVLTDGGFANAVAAQQVYGGHGYIAANGVEQFVRDARIAMIYEGAN 444

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG 480
               LD++   L   G       F+ +       G
Sbjct: 445 GIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHG 479


>gi|160895625|ref|YP_001561207.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361209|gb|ABX32822.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 385

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/357 (19%), Positives = 133/357 (37%), Gaps = 26/357 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        F  +      ++R    L   A      + +     +  + +  TP    
Sbjct: 48  GLFGMTIPEQFGGLELTMEEEVRVLFELCQTAPAFRSVIGTTVGIGSQGILIDGTPEQQA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W PK+ + E                   LTE   G+D A++ +   +  D        +
Sbjct: 108 AWLPKLATGEIM-------------ASFALTEPEAGSDAASLRTTAIRDGDHYVVNGNKR 154

Query: 233 WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +  ++P +  F ++A+ +    G   V   + D    G+ + +   K+G +   T ++ F
Sbjct: 155 FITNAPHAGMFTLMARTDPANKGAGGVSAFIVDAKSPGISFGKNDVKMGQKGAHTCDVFF 214

Query: 292 SNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            N          L    G    MK+L    +  A +SV   +  L +A++YA  R   G 
Sbjct: 215 DNVRVPAANLIGLKEGQGFKTAMKVLDKGRIHIAAVSVGVAQRILRDALNYALERKQFGQ 274

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +  +++  +AD   ++ AA  +    A   DE ++ S E       A   K +  +M
Sbjct: 275 PICEFQLVQAMLADSQAELYAAECMVIDAARRRDEGRNVSTE-------ASCCKMFATEM 327

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
              V   A++ +GGSGY+ E  I R YR+     +  G+     + +   + +    
Sbjct: 328 VGRVADRAVQILGGSGYLAEFGIERFYRDVRLFRLYEGTTRIQQVIIARNMVREARA 384


>gi|24666513|ref|NP_649069.2| CG3902 [Drosophila melanogaster]
 gi|7293851|gb|AAF49216.1| CG3902 [Drosophila melanogaster]
 gi|201066169|gb|ACH92494.1| FI09602p [Drosophila melanogaster]
          Length = 414

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T +L F N     
Sbjct: 193 VAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + ++   V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A    
Sbjct: 310 QSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 363 IKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|56478462|ref|YP_160051.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314505|emb|CAI09150.1| probable acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 599

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 103/510 (20%), Positives = 187/510 (36%), Gaps = 71/510 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD---KV 97
           S L       P VV   L+  G++                 P        G R D   +V
Sbjct: 25  SALQGFEDATPDVVEAILDEAGKFAAGVLG-----------PINARGDVQGCRLDADGRV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                W     R +  G         F      +        ++    +    L   +V 
Sbjct: 74  VTPDGWKEAWDRFVEAGWTGLSLPLEFGGQGLPKLVSTPVWEMWFATNMAFAMLPQLNVG 133

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A  + +  +  + + W PK+ S E+  T             + LTE + G+D+AA  ++
Sbjct: 134 QAEALLIAASDELKQTWLPKVVSGEWGST-------------MNLTEPQAGSDLAATRTR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG + L G K F+S    +       ++LA++         +  FLVP+ L D  
Sbjct: 181 AEPAPDGSFRLFGQKIFISYGEHELTSNIVHLVLARLPDAPAGVKGLSLFLVPKFLLDAD 240

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNT------FGFLLGDLNVSTGPVEDMKIL 315
              G+ N +    +++K+G   + T  + + +        G+L+G  N     +  M   
Sbjct: 241 GNPGAKNDVRCIAIEHKLGIHGSPTCTMSYGDAGDAGGAVGWLVGGPNRGLETMFIMMNE 300

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIA 367
                 +        +   A+ YAR R           G  ++  P +KR +  +   + 
Sbjct: 301 ARFGVGVQGAGLGERAYQLALGYARERVQGRDAITGEAGQPILHHPDVKRMLLSMRARVM 360

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGG 421
           A  AL +  A  FD A+   + A  A+       + P+ K WC ++   V ++A++  GG
Sbjct: 361 AMRALLYTAAGWFDFAEHHPDAALAAKCRRYVDLLMPVAKGWCTEVGQQVCSDAIQVFGG 420

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            G++EE  IA+  R++   +I  G+      D++     G  +  +   TL ++L +   
Sbjct: 421 MGFVEETGIAQFARDARIITIYEGTTGIQANDLI-----GRKILRESGETL-RELIADLH 474

Query: 482 KVITILRDSISLCKEDKGLARFL--TEKIA 509
                LR+   L     G A  +   E+ A
Sbjct: 475 ATAATLREEAELGSLADGFADSIIAVERAA 504


>gi|88704121|ref|ZP_01101836.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701948|gb|EAQ99052.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 586

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 100/556 (17%), Positives = 190/556 (34%), Gaps = 65/556 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-- 87
               M  +  D +L  +     S+   E   +GE + +    E  ++A      L     
Sbjct: 5   PLEDM-RFVIDEVLR-VGETLGSLPRFEELGVGEELTAALLDEGGKLAGEVLGPLRRVGD 62

Query: 88  -GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P      KV   P +   L++    G      D  F      + +   A+ ++  A +
Sbjct: 63  MNPARCEDQKVHISPGYAEALQQLAQGGWFGISADAEFGGQGLPELYGTAASEMWNGADM 122

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S  +A  +A   +  +   +  K+ + E+  T             + LTE  
Sbjct: 123 AFALAPFLSSGAALAIASHASDELKAIYLEKLHTGEWTGT-------------MNLTESG 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            G+D+  + ++     D  Y +SG K +++    D       ++LA++         +  
Sbjct: 170 AGSDLGVMKTRAVPNGDH-YLISGQKIYITWGDHDAVDNIVHLVLAKLPDAPEGSSGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           FLVP+ L +     G  N +     ++K+G   + T  + F +     G+L+G+ N    
Sbjct: 229 FLVPKFLVNADGSLGERNDVYPVSTEHKLGIHGSPTCVMAFGDDGGAVGYLVGEENRGLT 288

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M     L   +  +     +  +A+ YA+ R   G  +I+ P +KR +  +     
Sbjct: 289 CMFTMMNEARLKVGLQGLGASEGAYQQALAYAKERVQGGVPIIEHPDVKRMLLTMKALNE 348

Query: 368 AATALSFRLANSFDEAK-----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  AL++  A + D A       R    A   +M P+ K W  ++   + +  ++  GG 
Sbjct: 349 AMRALAYSEAVTMDLAHYGPESDRVASQARIDLMIPVIKGWMTEVGVELTSLGVQVHGGM 408

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           GY+EE   A++ R+     I  G+       L    L   G      +   +  D     
Sbjct: 409 GYVEETGAAQYLRDVRITPIYEGTNGIQAADLVGRKLGRDGGTAMGIVIEEIRADA---- 464

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAA----ALYRAGMNDI-ADVF---LEN 532
                  R  I    E   + + L    AL +S+      +         A  F   ++ 
Sbjct: 465 -------RTYIDAGGELAIVGKALESAAALHASSTEAILQMLAHTPEAARAAAFDYMMQT 517

Query: 533 -RFLDNCHSTHCMLHG 547
                           
Sbjct: 518 GYLFGGWQLARGAFVA 533


>gi|157962618|ref|YP_001502652.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157847618|gb|ABV88117.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 389

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 134/361 (37%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +        AH +    +   +        + S    + + 
Sbjct: 47  ELWPVLGDMGLLGVTVSEEYGGAGMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ + E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNSEQKAKYLPKLITGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVERGYKGFSTAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F +       + N+  G    +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMTACMDIVVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  + +  +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSYIYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|50086187|ref|YP_047697.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|49532163|emb|CAG69875.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
          Length = 390

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 128/360 (35%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   +      S   A+ + 
Sbjct: 52  RDLWNKAGELGLLCTTMPEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ + E             V   + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNEEQKQKWLPKMATGE-------------VVTAIAMTEPGTGSDLQAVRTSAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  +++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 E-YVINGSKIFITNGYLCDMAVVVCKTGNTDKGSANLSLIIVEADRAGFNKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    +  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPKENLLGMEGMGFMMLMKELAWERMLVAIICQAGAEAAFAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I    A         D       E       A 
Sbjct: 278 TKDRKAFGKPIGTFQNTRFKLAELRTEIDFCRAY-------LDRCMQLQLEEQLGIDAAA 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY    M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 331 AAKYKISDMFSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIMKELISRTL 390


>gi|301754904|ref|XP_002913268.1| PREDICTED: LOW QUALITY PROTEIN: isovaleryl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 425

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 125/379 (32%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLM 143
               P  +  D +          ++  + G+        +         ++     +   
Sbjct: 61  EHLAPQAQEIDHINEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEQVLVMEEISRA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 121 SGAVGLSYGAHSNLCLNQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRL 261
           E   G+D+ ++  + +K  D         W  + P +D  I+ A+ +         +   
Sbjct: 168 EPSAGSDVVSMKLKAEKKGDHYILNGNKFWITNGPDADILIIYAKTDPAAVPASRGITAF 227

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYL 318
           + +    G    +  +K+G R + T EL F +     +  L   +  V  +     L  L
Sbjct: 228 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAVNILGHLSKGVYVLMSGLDLERL 287

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 288 VLAGGPLGLMQAVLDHTIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 347

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+    +++             +  + A  V  + ++C G +GYI +  + R  R++ 
Sbjct: 348 ACDQGHCTAKD-------CAGVILYSAECATQVALDGIQCFGANGYINDFPMGRFLRDAK 400

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 401 LYEIGAGTSEVRRLIIGRA 419


>gi|184159453|ref|YP_001847792.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|239501702|ref|ZP_04661012.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
 gi|260557139|ref|ZP_05829355.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|332876295|ref|ZP_08444070.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183211047|gb|ACC58445.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|193078318|gb|ABO13292.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
 gi|260409245|gb|EEX02547.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|322509367|gb|ADX04821.1| acdB [Acinetobacter baumannii 1656-2]
 gi|323519391|gb|ADX93772.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735567|gb|EGJ66619.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 600

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 87/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSEEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIVHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|228958605|ref|ZP_04120323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801026|gb|EEM47925.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|229150554|ref|ZP_04278769.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
 gi|228632863|gb|EEK89477.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHHYILLAKKLLKQSLKTLSKTPGL 455


>gi|218659484|ref|ZP_03515414.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli IE4771]
          Length = 282

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 115/302 (38%), Gaps = 23/302 (7%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T    + + PK+ S E+               G  LTE + G+D + + ++ +
Sbjct: 1   MPILKFGTEDQRQRFLPKLASGEW-------------IGGFALTEPQAGSDASNLKTRAR 47

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +  D        ++  S    +  I+ A  +   G   +   +      G    R++ K+
Sbjct: 48  RDGDHYVLDGAKQFITSGKNGNIIIVFAVTDPDAGKKGITAFIVPTETPGYEVIRVEEKL 107

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAI 336
           G  S  T ++ F+     +   L     G    +  L    +  A  +V   R +   A 
Sbjct: 108 GLHSTDTCQIAFNAMRIPVDLRLGAEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAAR 167

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  + +   +   +AD+A+ I AA  L F  A   +       EA+ A   
Sbjct: 168 DYAKERMAFGKPIFEHQAVAFRLADMAVRIEAARQLVFHAAALREAELPCLSEASMA--- 224

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  +MA  V ++A++  GG GY+ +  + R YR+     I  G+ +   + +  
Sbjct: 225 ----KLFASEMAERVCSDAIQIHGGYGYMADYPVERIYRDVRICQIYEGTSDVQRMVIAR 280

Query: 457 LL 458
            L
Sbjct: 281 NL 282


>gi|332185888|ref|ZP_08387635.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332014246|gb|EGI56304.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 598

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/493 (16%), Positives = 173/493 (35%), Gaps = 65/493 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGL 115
           +  G  +     +E AR+       L+A     G + +   V     +     +    G 
Sbjct: 31  DEFGPELYDAILEEAARVTQEVLLPLNATGDIEGCKLENGVVRTPAGFKEAYSQFCEGGW 90

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   +      +A       +     L        +  + + +    +  +   + 
Sbjct: 91  AALASPVEYGGQGLPEAVNKLVEEMICATNLSFSLYPGLTHGATTALMGHGSEDLKSFYL 150

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G K F+
Sbjct: 151 PKMISGEWSGT-------------MCLTEAHCGTDLGLLRTRAEPQEDGSYAITGGKIFI 197

Query: 236 SSPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------GSPNGLCYQRLKNKI 279
           S+   D       ++LA+  +   G   +   L            G  NG+    +++K+
Sbjct: 198 SAGDHDLTDNVIHLVLARTPDAPKGVKGISLFLVPKYLPKDDGSVGPANGVSVAAIEHKM 257

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G +++AT +LEF+++ G+++G+LN     +  M     +   I  +    ++   A+ YA
Sbjct: 258 GLKASATCQLEFNDSKGWVVGELNKGLAAMFTMMNTERVSVGIQGLGVNEIAYQSAVAYA 317

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------ 381
           + R                  +I  P ++R +  + +      AL    A   D      
Sbjct: 318 KDRLQGRALGGAKRPDLPADPIIVHPDVRRMLMTMRVYAEGCRALGQWAARGLDAEAHAI 377

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   ++  A +  +M P+ K     +A      A++  GG G+I +  I +  R++    
Sbjct: 378 DPADKARAADFVALMTPVVKALFTDLAFDAANLAVQVHGGHGFIRDHGIEQFVRDARIAQ 437

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+     LD++                +   +G   +     + + +    + +  A
Sbjct: 438 IYEGTNGVQALDLVG-------------RKMPAHMGRYMRPFFHAVSEQVEALTKHEDKA 484

Query: 502 RFLTEKIALASSA 514
             LT   A    A
Sbjct: 485 --LTGWAAALQQA 495


>gi|229190414|ref|ZP_04317414.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228593027|gb|EEK50846.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|218235650|ref|YP_002367035.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218163607|gb|ACK63599.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 569

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|126726056|ref|ZP_01741898.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
 gi|126705260|gb|EBA04351.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2150]
          Length = 571

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/436 (19%), Positives = 167/436 (38%), Gaps = 38/436 (8%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    ++    G            +   QA     A +   A L        S 
Sbjct: 71  VRTSPGFVEGYQKIAEGGWVGMCAKPENGGMGLPQALGAAVADMMSGACLALQLCPLLSQ 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ S
Sbjct: 131 GQIEALEHHGSDDLKALYLPKLTSGEWTGT-------------MNLTEPQAGSDVGALKS 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED- 264
           +     DG Y +SG K +++    DA      ++LA++         +  FLVP+ + D 
Sbjct: 178 KAVDNGDGTYAISGQKIYITWGDHDAAENICHLVLARLPEGGDGTKGISLFLVPKFIPDE 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L++K+G   + T  +++    G+L+G        +  M     L  
Sbjct: 238 AGNPGVANSLKVVSLEHKMGIHGSPTAVMQYDGATGWLVGQAQGGMKAMFTMMNNARLGV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALSF 374
           A   V     +   A+ +++ R            + D   ++R +  +  D  AA A+  
Sbjct: 298 AAQGVGMAEAAFQHALAFSQDRKQGRTPVEGKGAIFDHADVRRMLMTMRADTFAARAICA 357

Query: 375 RLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             A + D A++   ++    A ++ PI+K +C  +A  V ++ ++  GG G+IEE   A+
Sbjct: 358 SNAVAIDLARATDSADWQTRAALLTPISKAFCTDIANEVASDGLQVFGGMGFIEETGAAQ 417

Query: 433 HYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           + R++    I  G+     +D V   +  G +    L   +     ++  +   + +   
Sbjct: 418 YARDARILPIYEGTNGIQAMDLVARKMADGGDGANALLDEIVAGTKAAQDRHADMAKAVY 477

Query: 492 SLCKEDKGLARFLTEK 507
           S  +  +    +LT +
Sbjct: 478 SAAETLREAVDYLTGQ 493


>gi|157116344|ref|XP_001658431.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108876518|gb|EAT40743.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 422

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 134/373 (35%), Gaps = 34/373 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMS 153
           D  +F P+    +     +GL        +           +    L  +    A  +  
Sbjct: 73  DDHQFDPSVVQAM---FDNGLMGVEVGDEYGGSGCNFMTMMLVVEELSKVDPAVAAFVDI 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +    S++  + T    K + PK+ S                +    L+E   G+D  +
Sbjct: 130 HNTLVNSLMIKLGTEEQKKKYLPKLCS--------------EYSGSFALSEPSAGSDAFS 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  +K  +         W  +S +S  F+++A      G   +   + D    G    
Sbjct: 176 LKTTAKKDGNHYILNGSKMWISNSDLSGMFLIMANANPSAGYRGITTFIVDRDMEGFTVG 235

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSL 332
           + +NK+G  ++ T +L   N       + N+     +  +    +L+   + +    + L
Sbjct: 236 KRENKLGICASGTCQLHLDNVRVP---EENILGEFGKGYQYAAGFLNEGRIGIGAQMIGL 292

Query: 333 AEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           A+        Y   R   G  +     M+  IA IA +I AA  L +  A   +      
Sbjct: 293 AQGCMDATIPYLLERKQFGSDIYSFQSMQHQIATIATEIEAARLLVYNAARLQEAKVPFL 352

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++AA A       K +  ++A     + ++ +GG G+ ++    + YR+    +I  G+ 
Sbjct: 353 KQAAMA-------KLYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEGTS 405

Query: 448 NAMVLDVLNLLEK 460
           N  +  +  +++K
Sbjct: 406 NMQLSTIAKVMKK 418


>gi|313672317|ref|YP_004050428.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939073|gb|ADR18265.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 588

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/444 (18%), Positives = 160/444 (36%), Gaps = 35/444 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L++ +   GL        +  +   +A  +  A         +    + +      +  
Sbjct: 59  QLMKEAGELGLLMIDGPEEYGGLNLDKATSMLVAEKVAPGGSFSVAYAAHTGIGTLPLVY 118

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + +  K+ + E+                  LTE   G+D     +      DG
Sbjct: 119 YGTKEQKEKYLEKLLTGEW-------------LGAYCLTEPGSGSDALGAKTSAVLSDDG 165

Query: 225 -IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F + A+V+ +         L + +  GL +   + K+G +
Sbjct: 166 KYYILNGTKQWITNAGFADIFTVFAKVDKQH----FTAFLIERNTPGLSFGAEEKKMGIK 221

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++   N    +   LG++        ++  +     A       + +LAE I YA
Sbjct: 222 GSSTRQVILDNVKVPVENVLGEVGKGHKIAFNVLNVGRFKLAAAVTGAAKYALAEGIKYA 281

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------------KSRS 387
             R     ++     ++  I+D+     A+ +L +RLA   D A            +   
Sbjct: 282 NVRKQFDRLISSFGAIQEKISDMTAYTYASESLIYRLAGLLDNALNKIDPSLPNYYEIYQ 341

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E     I   I+K +C  +   V+ E ++  GG G+ +E    R YR+   N I  G+ 
Sbjct: 342 KEIEEYAIECSISKVFCSDVLALVVDETLQIFGGYGFSQEYPAERFYRDERINRIFEGTN 401

Query: 448 NAMVLDVLNLLEKGTNLFE-QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               L +  ++ +     E  L     + +          + +S    KE   L    T 
Sbjct: 402 EINRLLIPGMMLRRAMKGEIPLTQEAMKAVNQLMTPSFDEIDESTPYAKEKYTLNNLKTI 461

Query: 507 KIALASSAAALYRAGMNDIADVFL 530
            + LA SA   Y   +N+  +V L
Sbjct: 462 YLILAGSAVQKYMNNINEQQEVLL 485


>gi|328856845|gb|EGG05964.1| hypothetical protein MELLADRAFT_52672 [Melampsora larici-populina
           98AG31]
          Length = 374

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 125/357 (35%), Gaps = 27/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L ++    GL        +  + +    H I    +   +        + +    + + 
Sbjct: 33  ELWKKFGEMGLLGITVPEKYGGLNKGYLDHIIAMEEISRGSGSIGLSYGAHTNLCINQIH 92

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P + S                   L ++E   G+D+ ++     +  D
Sbjct: 93  RNGTDSQKQKYLPDLISG-------------QKIGSLAMSEVESGSDVVSMKLLAIEKDD 139

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +   I+ A+     G   +   + +    G       +K+G R 
Sbjct: 140 HYLLNGNKFWITNGPNASTLIVYAKTNPPKG---ITAFIIESDMAGFSTSPKLDKLGMRG 196

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L    G ++ +   + L+  ++S   +  M+ +   A+ Y  
Sbjct: 197 SNTCELVFEDCRVPKENVLGEINGGLKVLMSGLDLERLVLSGGPLGLMQSAFDVAMPYIH 256

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  IAD+   I+A+ +  + +A + D+ K    +           
Sbjct: 257 DRRQFGKPIGSFQLIQGKIADMYTKISASRSYVYAVARACDQGKVSRRD-------CAGV 309

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             +    A  V  +AM+ +GG+GYI E    R +R++    +  G+     + +  L
Sbjct: 310 ILYTSDRALEVATDAMQMLGGNGYINEYPTGRIFRDAQLYRVGAGTQEIRRMLIGRL 366


>gi|219847153|ref|YP_002461586.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541412|gb|ACL23150.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 382

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 137/388 (35%), Gaps = 33/388 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QEL R       +     P     D+    P+      +    GL    +   +      
Sbjct: 9   QELIRQTVREFAE-KEIAPKARYVDEHSAFPS--ETFAKMAQLGLMGLPFPEEYGGAGAD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 A               +  +   S  +A+  T    + +               
Sbjct: 66  SVSTAIAIEEVARCCGSTALAYAAHLGLGSAPIAMFGTEDQKRRFL-------------V 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P  K       GLTE   G+D  A  +  + + D         W  ++P++   I+ A  
Sbjct: 113 PAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNAPIAGHIIVTAVT 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGP 308
           +  +G   +   +      GL + + + K+G R + +  +   +        L     G 
Sbjct: 173 DPELGKKGISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGF 232

Query: 309 VEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           ++ +++   LD   + +  M + L       A+ YAR R   G  +     +   IA++A
Sbjct: 233 IQFLQV---LDGGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +D+AAA AL +  A   D  K  + EAA       I K +  + +  +  +A++  GG G
Sbjct: 290 VDLAAARALVYTAARMKDAGKPYTREAA-------IAKLFASEASERICRDAIQVFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451
           Y +E  + R YR++   +I  G+   + 
Sbjct: 343 YSQEYPVERLYRDTRLLTIGEGTSEILR 370


>gi|55377615|ref|YP_135465.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230340|gb|AAV45759.1| acyl-coA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 382

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 132/377 (35%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    L+      GL        +            A           
Sbjct: 26  PRAAEIDETDEFP--WDLVDEMADLGLMGMPIPEEYGGAELDYHSYAMALEEISRGSGGL 83

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +++  ++ A  M+         + +               P+          L+E   
Sbjct: 84  GTIVAAHISLACNMIYEFGNEAQKETYL-------------TPLAAGEEIGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-D 264
           G+D+ A+ +  + +   D      G  W  +  ++D  ++ A+ +   G   +   +   
Sbjct: 131 GSDVPAMDTTAEPVDGGDAYLVNGGKLWISNGSVADTVVLFAKTDPEAGNKGISSFIVRP 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSA 321
              +G   +  ++K+G++   T EL F          L     G V  +K      +  A
Sbjct: 191 EEDDGFIVEGTEHKLGDKGCPTAELRFDEMRIPADRMLGEEGRGFVHALKTLNGGRITIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   + +L EA+ YA+ R      + D   ++  +AD+     AA  L  + A+   
Sbjct: 251 ARGVGIAQAALDEALQYAQDREQFDQPISDFQAIQHKLADMDTKTQAARLLMHQAADKKM 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S  +EAA A       K +  +++  V  E ++  GG GY ++    R YR++  N 
Sbjct: 311 AGESFVKEAAQA-------KLYASEVSREVANEGIQVHGGYGYTKDFPAERFYRDAKLNE 363

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   +   + + L
Sbjct: 364 IYEGTSEVLRNTIASEL 380


>gi|73541828|ref|YP_296348.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119241|gb|AAZ61504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 600

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 202/506 (39%), Gaps = 73/506 (14%)

Query: 73  LARMANYNTPQLHAYGPGGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           L   A ++   L      G+R        +V     +    R+    G    +    F  
Sbjct: 41  LEEAAKFHGEVLAPLNAAGDRQPSNWHDGQVTTTAGFRDAFRQFGEGGWQGIVHPAEFGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYD 184
               +   +    + +M        + P +T  ++ AL+T  +  + + + P++ + E+ 
Sbjct: 101 QGLPK--LVATPCIEMMNAANMSFALCPLLTDGAIEALLTAGSDELKQRYLPRLIAGEWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE + G+D+A + S+ ++ +DG Y +SG K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLALVRSRAERQADGSYKVSGTKIFITYGEHDMAE 205

Query: 242 --AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+          +  FLVP+ L +     G+ N +    +++K+G +++ T  
Sbjct: 206 NIVHLVLARTPDAPEGVKGISLFLVPKFLVNDDGSLGARNDVECVSIEHKLGIKASPTAV 265

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +     G+L+G+ N     +  M         +  ++    +  +A+ YA+ R  S
Sbjct: 266 LQFGDNGGAIGYLIGEENRGLEYMFVMMNAARFGVGVQGIAISDRAYQQAVAYAKERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEA 390
                       +I  P ++R + ++      A AL+        LA+   +A++R+   
Sbjct: 326 RPVDGSSKDAVTIIQHPDVRRMLIEMRALTEGARALALVAAGYSDLAHQSPDAETRAHYG 385

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A    + P+ K W  +M+  V +  ++  GG G+IEE   A+HYR++    I  G+    
Sbjct: 386 AAYEYLVPVIKGWSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA---RFLT 505
             D++    +  G    + + + ++        K +  L++    C+     A   R   
Sbjct: 446 ANDLIGRKTMRDGGAAAQAVLADID--------KTLEALKEYADGCRNGACSAMLMRLGV 497

Query: 506 EKIALASSAAALYRAG---MNDIADV 528
            ++AL ++   +   G    N +   
Sbjct: 498 ARLALGNAVDHVVEKGRKDPNAVFGA 523


>gi|309360182|emb|CAP31581.2| hypothetical protein CBG_12633 [Caenorhabditis briggsae AF16]
          Length = 418

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 121/307 (39%), Gaps = 34/307 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++  + +    + + PKI S                     L+E   G+D  A+ +  
Sbjct: 133 APLIIQLGSEEQKQKYLPKIVS--------------EAIGSFALSETGSGSDAFALKTTA 178

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D         W  ++  +  F++ A  +   G   +   L D +  G+   + ++K
Sbjct: 179 KKDGDDFVISGSKMWITNAGHAQFFLVFANADPSKGYKGITCFLVDRNQEGVSVGKKEDK 238

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI- 336
           +G R          +    L+  + +S    E  K  I  L++  + +    + LA+   
Sbjct: 239 LGIR-------LLRHALSTLITYVCISRPFSERYKYAIECLNAGRIGIGAQMLGLAQGCF 291

Query: 337 ----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                Y ++R   G  LID   M+  I  + ++I AA  L +  A   +       EAA 
Sbjct: 292 DQTIPYLQQREQFGQRLIDFQGMQHQIGQVRMEIEAARLLVYNAARMKENGLPFVREAAM 351

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +  ++A    ++ +E +GG G+ +E  + + YR+S   +I  G+ N  + 
Sbjct: 352 A-------KLFASQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLN 404

Query: 453 DVLNLLE 459
            +  L++
Sbjct: 405 TIAKLVD 411


>gi|297199867|ref|ZP_06917264.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710332|gb|EDY54366.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 386

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 152/406 (37%), Gaps = 35/406 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  +  E H   + ++R     GL    + 
Sbjct: 2   DHRLSPELEELRRTVEQF-----AHDVVAPKIGEYYEHHEFPYEIVREMGRMGLFGLPFP 56

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  +    L  +    A  L +     A  + L  T    ++W P++ S
Sbjct: 57  EEYGGMGGDYLALGLVLEELARVDSSVAITLEAGVSLGAMPIHLFGTEEQKREWLPRLCS 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E             +    GLTE  GG+D  A  +  +   D   + ++G K F+++  
Sbjct: 117 GE-------------ILGAFGLTEPDGGSDAGATRTTARLDPDTDEWVINGTKCFITNSG 163

Query: 240 SD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G  L+  ++      G       +K+G  ++ T EL FS+  
Sbjct: 164 TDITGLVTVTAVTGRKPDGKPLISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFSDVR 223

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G  + ++IL    +  A +     +  + E++ YA+ R   G  +   
Sbjct: 224 VPAANLLGEQGRGYAQFLRILDEGRIAIAALGTGLAQGCVDESVKYAKEREAFGRPIGAN 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+ +    A       A+     +   +EAA A       K +   +A    
Sbjct: 284 QAIQFKIADMEMKAHTARLAWRDAASRLVLGEPFKKEAALA-------KLYSSTIAVDNA 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 337 REATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|41410312|ref|NP_963148.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399146|gb|AAS06764.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 386

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 144/380 (37%), Gaps = 30/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  E  P    +LR S   G+              ++   +R      +A
Sbjct: 21  KRLAPHALEWDAAEHFPV--DVLRESAELGMAAIYCREDVGGSGLRRLDGVRIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    TP   K W P++ +               V     LTE
Sbjct: 79  DPTTAAFLSIHNMCAWMIDSYGTPEQRKAWVPRLAAM-------------DVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA++++  +   G Y L G K F+S   + D ++++A+  G  G   +   + 
Sbjct: 126 PGAGSDAAALSTRAVRQG-GDYVLDGVKQFISGAGASDVYLVMARTGGE-GPRGISAFVV 183

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
           +    GL +   + K+G  +  T ++            L  + G      I +       
Sbjct: 184 EKGSAGLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+ A  S+ G + +  +A  Y R R   G  L+D+P ++ A+AD+A  +  +  + +R A
Sbjct: 244 LNIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D       E      +  + K +       V  +A++  GG GY+ E  + +  R+ 
Sbjct: 304 GALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDL 357

Query: 438 PANSILLGSGNAMVLDVLNL 457
             + IL G+   M + +   
Sbjct: 358 RVHRILEGTNEIMRVVIGRA 377


>gi|167624816|ref|YP_001675110.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354838|gb|ABZ77451.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 389

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 134/361 (37%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +    +   AH +    +   +        + S    + + 
Sbjct: 47  ELWPVLGDMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ + E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNSEQKAKYLPKLITGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVERGSKGFSTAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F +       + N+  G    +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMTACMDIVVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|194213009|ref|XP_001503007.2| PREDICTED: similar to Isobutyryl-CoA dehydrogenase, mitochondrial
           precursor (Acyl-CoA dehydrogenase family member 8)
           (ACAD-8) (Activator-recruited cofactor 42 kDa component)
           (ARC42) [Equus caballus]
          Length = 377

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 24  PNMAEWDQKELFPV--DVMRKAAQLGFGGIYVQTDVGGSGLSRLDTAVIFEALATGCTST 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A ++           + P + + E                   LTE   G
Sbjct: 82  TAYISIHNMCAWIIDTFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 129 SDAASLLTSAKRQGDH-YVLNGSKAFISGAGESDVYVVMCRT-GEPGPKGISCIVVEKGT 186

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 187 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCS 246

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L ++  ++  +AD+A  + A+  +    A +     
Sbjct: 247 LGAAYASVVLTRDHLNVRKQFGEPLANKQYLQFKLADMATRLVASRLMIRSAAVAL---- 302

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ +I ++ R+S  + IL 
Sbjct: 303 --QEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAIQQYVRDSRVHQILE 360

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 361 GSNEVMRMLISRSLLQ 376


>gi|16182654|gb|AAL13543.1| GH07925p [Drosophila melanogaster]
          Length = 414

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 16/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++  F++ A  +   G   +   + D    GL   + ++K+G R++ T +L F N     
Sbjct: 193 VAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVP- 251

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
             + N+        K    +L+   + ++   V LA+      I Y   R   G  + + 
Sbjct: 252 --EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNF 309

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  ++A    
Sbjct: 310 QSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAA 362

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 363 IKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410


>gi|294628534|ref|ZP_06707094.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831867|gb|EFF90216.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 383

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 140/383 (36%), Gaps = 35/383 (9%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP + A+    E  D+           ++    G      D  +                
Sbjct: 25  TPHVVAWDR-AEEVDRAVV--------KKLGEVGFLGLTVDEEYGGSGGDHLAYCLVTEE 75

Query: 141 YLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                     ++S S+   A  +A        + W P + S EY                
Sbjct: 76  LGRGDSSVRGIVSVSLGLVAKTIAAWGDEEQKRRWLPGLTSGEY-------------VGC 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
            GLTE   G+D  ++ ++  +  D  Y ++G K F+++   +D  ++ A+     G   V
Sbjct: 123 FGLTEPGTGSDAGSLATRAVRDGDD-YVINGAKTFITNGTWADVVLLFARSTDAPGHKGV 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI- 316
              L      GL  + +  K+G R  AT EL   +        L     G    M  L  
Sbjct: 182 SAFLVPADTPGLTRRTIHGKLGLRGQATAELVLEDVRVPASAMLAPEGKGFAVAMSALAK 241

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A   V   + +L  A+ YA  R   G  +    +++  I+DIA+D+ AA  L++R
Sbjct: 242 GRMSVAAGCVGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIAVDVDAARLLTWR 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A+  D     + E++ A       K +  + A      A++  GG GYI+E    +  R
Sbjct: 302 VADLIDRGLPFAVESSKA-------KLFASEAAVRAANNALQVFGGYGYIDEYPAGKLLR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++   ++  G+     L +   L
Sbjct: 355 DARVMTLYEGTSQIQKLVIGRAL 377


>gi|221114736|ref|XP_002158662.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 423

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 137/385 (35%), Gaps = 39/385 (10%)

Query: 95  DKVEFHPAW---HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           D+++ +  W       ++    GL      + +  +      H I    +   +      
Sbjct: 66  DQIDKNNGWSDLREFWKKLGDMGLLGITVSQEYGGLGLGYFEHVIAMEEISRASGAIGLS 125

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S    + +A   T    + + PK+ S E             V   L ++E   G+D
Sbjct: 126 YGAHSNLCVNQIARNGTKNQKEKYLPKLISGE-------------VFGSLAMSEVGSGSD 172

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
           + ++  +  +  +         W  + P S+ F++ A+   +       +   + +    
Sbjct: 173 VVSMKLRADRDGNDYILNGNKFWITNGPDSETFVVYAKTVSDKEKAARGITCFIIERGMK 232

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G       +K+G R + T EL F N        L      V  +     LD   + +SG 
Sbjct: 233 GFSTMPKLDKLGMRGSNTCELVFDNCRVPAENILGELNQGVYVL--FSGLDIERLVLSGG 290

Query: 329 RVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + + +A+      Y   R   G  +    +M+  +ADI + ++A+ +  + +A + D  
Sbjct: 291 PLGIMQAVSDTVFPYVHARKQFGESVGHFQLMQAKLADIYVALSASRSYVYSVARAIDSG 350

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S++             +  + A  V  + ++C+GG+GYI +    R  R++    I 
Sbjct: 351 HFNSKD-------CAGVILYASEKATQVALQGIQCLGGNGYINDYPTGRFLRDAKLYEIG 403

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQL 468
            G+              G N+ +Q 
Sbjct: 404 AGTSEI------RRWLIGRNINQQF 422


>gi|56697074|ref|YP_167437.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678811|gb|AAV95477.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 380

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+     P    L  +    G                +           MA    
Sbjct: 26  PYARQWEAEGTIP--KDLWPQVGELGFGGLYVSEEAGGAGLSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P + S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDNFASDELKTRVMPDVLS-------------LNTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ +K ++G Y L+G K F+S    SDA++ + +  G  G   +  +  +   
Sbjct: 131 SDAAALKTRAEKSNEG-YVLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGISTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL +  L++K+G +S  T +++F +        + V   G    M  L    L+ A  S
Sbjct: 189 PGLSFGALEDKMGWKSQPTAQVQFDDCKVPAGNLVGVEGDGFKYAMMGLDGGRLNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D   
Sbjct: 249 LGAAQTALNMTLQYMGERKAFGKSIDQFQALQFRLADMEIELQAARTFLRQAAWKLDNKT 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   +
Sbjct: 363 GTNEIMRVIVARHM 376


>gi|30020420|ref|NP_832051.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228939490|ref|ZP_04102078.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972343|ref|ZP_04132954.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978956|ref|ZP_04139321.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|229127729|ref|ZP_04256718.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|29895971|gb|AAP09252.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228655806|gb|EEL11655.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228780738|gb|EEM28951.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407]
 gi|228787360|gb|EEM35328.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820190|gb|EEM66227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326940036|gb|AEA15932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 569

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|304409873|ref|ZP_07391492.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307302420|ref|ZP_07582178.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304351282|gb|EFM15681.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306914458|gb|EFN44879.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 389

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 150/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +    H   P   + D     P  + L       GL     
Sbjct: 12  LGEDV------DMLRDAVQDFAT-HEIAPIAAKVDHDNAFP--NELWPVLGSMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  TEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRFILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 AHTYVIYAKTDLTKGAHGITAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKSYVYAVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|108756925|ref|YP_632837.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108460805|gb|ABF85990.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 614

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 97/524 (18%), Positives = 193/524 (36%), Gaps = 69/524 (13%)

Query: 32  IGMNAYSSDSLLVALIANFPS-------VVHKELELLGEYVLSCTAQELARMANYNTPQL 84
            G+N Y +D  L  +                   +  G         E  R A      L
Sbjct: 3   AGINTYKTD--LREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPL 60

Query: 85  HAY-GPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           ++     G R +    F P  +    ++    G                   ++    L 
Sbjct: 61  NSVGDREGCRVENGAVFTPTGFKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELL 120

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A          +  +A +VA   TP   K +  ++ +  +  T             + 
Sbjct: 121 SGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNGTWGGT-------------MC 167

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----- 251
           LTE   G+D+ A  S  ++  DG Y + G K F+S    D       ++LA+++G     
Sbjct: 168 LTEPHAGSDVGAAKSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGT 227

Query: 252 -RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLG-D 301
             +  F+VP+L  +     G PN +    +++K+G   +AT  + F    N  G L+G  
Sbjct: 228 KGLSLFIVPKLRINADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTV 287

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGIL 349
            +V    +  M     +   I  +     +   A+ YA+ R                  +
Sbjct: 288 EHVGMSQMFKMMNGARIAVGIQGIGLASAAYYNALDYAKDRKQGSHFTKWKDPTAPRAAI 347

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAA-----YARIMAPITK 401
           I+ P ++R + DI   +    +L  +LA   D+A+    + ++AA        ++ P+ K
Sbjct: 348 IEHPDVRRMLLDIKAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVELLTPLVK 407

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--E 459
            +  + A  + A+A++  GG+GYI++  + ++ R+S   SI  G+ +   +D++     +
Sbjct: 408 AYSSEQAFRLCAQAIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQ 467

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVI--TILRDSISLCKEDKGLA 501
            G   F+Q    +   + +  +  +    ++   +  +     A
Sbjct: 468 AGGMHFQQFMGDVGSFIEAHREHAVYGEAVKSLAAAQEALMASA 511


>gi|301632570|ref|XP_002945354.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 376

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 134/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWDK    P   A+ +     G +       +                        
Sbjct: 24  PHAARWDKEHHFP--RAVHQGLAQLGAYGICVPEQYGGAGLDYVTLALVLEEIAAGDGGT 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +S +    + + +          W              AP+ +  +     LTE   
Sbjct: 82  STAISVTNCPVNAILMRYGNAAQKAVWL-------------APLARGEMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D +A+ +   +  DG Y L+G K F++S  +    I++A  +   G   +   L    
Sbjct: 129 GSDASALRTTAVQEGDG-YVLNGVKQFITSGQNGQVAIVIAVTDKAAGKKGMSAFLVPTD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    RL++K+G  S+ T ++ F         L+G                 +  A  
Sbjct: 188 TPGYVVARLEDKLGQHSSDTAQIHFDGCRIPAANLIGAEGEGYKIALSALEGGRIGIAAQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +   A+ Y++ R   G  + +   +   +A+ A  I AA  L +  A+  D  
Sbjct: 248 SLGMARAAFECALQYSKERESFGQAIFEHQAVGFRLAECATQIEAARQLIWHAASLRDAG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EAA A       K +  +MA  V + A++ +GG G + +  + R YR+     I 
Sbjct: 308 QPCLKEAAMA-------KLFASEMAERVCSAAIQTLGGYGVVSDFPLERIYRDVRVCQIY 360

Query: 444 LGSGNAMVLDVLNLL 458
            G+ +   + +   L
Sbjct: 361 EGTSDVQKIIIQRAL 375


>gi|160896784|ref|YP_001562366.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160362368|gb|ABX33981.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 601

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/520 (18%), Positives = 181/520 (34%), Gaps = 76/520 (14%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAY 87
           P    M  +    +            H E++      ++   +E  + A N   P   + 
Sbjct: 6   PPLRDM-QFLMHEVFKVTDDYQQMTAHAEVD---ADTINAVLEEAGKFAANVTFPLNISG 61

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G   +    +V     +    ++ +  G      D ++       A  + +A   ++
Sbjct: 62  DAEGCVLNKETHEVTTPKGFKEAYQKYVEGGWPSLSCDTAYGGQGLPFA--VNSAVYEML 119

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +  AL    T    K + PK+ S E+  T             + 
Sbjct: 120 NSANQAWTMYPGLSHGAYEALHVHGTEEQKKLYLPKLTSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG-- 251
           LTE   GTD+  + ++ + ++    G Y ++G+K F+S+   D       ++LA++    
Sbjct: 167 LTEPHCGTDLGLLRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTDNIVHLVLARLPDAP 226

Query: 252 ----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
                +  F+VP+ +       G  N +    L++K+G   NAT ++      G L+G  
Sbjct: 227 VGSKGISLFVVPKFVVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGQP 286

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILI 350
           N     +  M     L     S+    V+   A+ YA+ R                  +I
Sbjct: 287 NKGLQAMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKPADPII 346

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWC 404
             P ++R +           AL    A   D      + K R + A    ++ PI K + 
Sbjct: 347 VHPDVRRMLLTAKAYAEGGRALVTYCAFLIDKEFNHPDEKVRKDSAELVALLTPIVKAFI 406

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                     + +  GG G+I E  + +  R++  N I  G+     LD+L     G   
Sbjct: 407 TDNGWTATTMSQQVYGGHGFITEWGMEQFVRDARINMIYEGTNGIQALDLLGRKVLGNQ- 465

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                       G+S KK   ++   +     ++ +A F+
Sbjct: 466 ------------GASLKKFGKLVAQLVEEEGVNEKMAEFI 493


>gi|110632946|ref|YP_673154.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110283930|gb|ABG61989.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 380

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 144/402 (35%), Gaps = 33/402 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS     +A  A     +     P   +WD+ +  P     LR++   G+       
Sbjct: 2   DFDLSEEQVAVAETARSFADE--ELAPFAIQWDRDKHFPL--ETLRKAGALGMGGIYVAE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +       +   +                +S     A M+         + W P++ + E
Sbjct: 58  ASGGTGLGRVESVITIEALATGCPSIAAYISIHNMCAWMIDCFGNDEQRRRWLPQMIAME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D AA+T++  +  D  Y ++G K F+S   +  
Sbjct: 118 C-------------LGSYCLTEPGSGSDAAALTTRAIRDGDD-YVVTGQKQFISGAGAAG 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             ++    G  G   +  L+      GL +   ++K+G  +  T  +        +    
Sbjct: 164 VYIVMVRTGGDGPKGISALVIPADTPGLSFGANEHKMGWNAQPTRAVVLDGARVPV---A 220

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N      +  KI +       L+ A  S+ G + +  +A+ Y R R   G  LI+   ++
Sbjct: 221 NRLGAEGDGFKIAMAGLDGGRLNIAAASLGGAQAAFEKAVAYMRERRAFGQALINFQALQ 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A ++ A     +R A + +           A  +  + K         V  +A+
Sbjct: 281 FHLADMATELEACRTFLWRAAEALERKAPD------ATRLCAMAKRLVTDRCFEVANKAL 334

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY+ E  + +  R+   + IL G+   M + V   +
Sbjct: 335 QLHGGYGYLAEYGMEKIVRDLRVHQILEGTNEIMRMIVARSI 376


>gi|15827314|ref|NP_301577.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221229792|ref|YP_002503208.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|1168288|sp|P46703|ACDP_MYCLE RecName: Full=Probable acyl-CoA dehydrogenase fadE25
 gi|466860|gb|AAA85936.1| acd [Mycobacterium leprae]
 gi|13092863|emb|CAC30246.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219932899|emb|CAR70831.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 389

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 121/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P     L      G +       +                       A
Sbjct: 36  PHAADVDQRARFPE--EALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASA 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P +                       L+E+  G
Sbjct: 94  SLIPAVNKLGTMGLILRGSEELKKQVLPSL-------------AAEGAMASYALSEREAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++ +   D         W  +   S  + ++A  +   G   +   +      
Sbjct: 141 SDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKDDE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           G      + K+G + + T EL F       +    +   P    K  L  LD    ++  
Sbjct: 201 GFSIGPKEKKLGIKGSPTTELYFDKCR---IPGDRIIGEPGTGFKTALATLDHTRPTIGA 257

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+     AI Y + R   G  +     ++  +AD+A+ + AA  + +  A   + 
Sbjct: 258 QAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAER 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           ++  +K +   +A  V  +A++  GG+GY  +  + R  R++    I
Sbjct: 318 GEPD------LGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQI 371

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L +
Sbjct: 372 YEGTNQIQRVVMSRALLR 389


>gi|170752125|ref|YP_001758385.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658647|gb|ACB27702.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 595

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/550 (19%), Positives = 191/550 (34%), Gaps = 63/550 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD---KV 97
           LL  ++                 V+    +E A++A      L       G R +    V
Sbjct: 14  LLTDVLGFHARDNLAGFADASPDVVEAVLREGAKLAEEVLAPLNRTGDVEGCRREADGTV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G        ++        H +  A     +       M P +T
Sbjct: 74  RTPTGFKAAYDTYASGGWMGLSVPEAYGGQGLP--HTLNTAIQEFASGANLAFGMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +M AL    +      + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAMAALLVHGSEEQKALYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y ++G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSITGTKIFISAGEHDLAENIVHLVIARIEGAPAGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G+ NG+    L++K+G   NAT  + +    G+L+G  N     +  M     L 
Sbjct: 239 ADGSLGARNGVSCGSLEHKMGIHGNATCVMNYDGATGWLVGQENRGLNAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +    V+   A  YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEVAYQNAAAYAKDRLQGRALTGAKAPEKAADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    A   D      +AK R     +  +M P+ K        A   EA + +GG
Sbjct: 359 AARALMLWTALQADILHRSEDAKERQAADDHLGLMTPVVKGVFTDRGFANAVEAQQLLGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GYIEE  +++  R++    I  G+     +D++   L + G          ++  L   
Sbjct: 419 HGYIEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMTFLGEVQTFLKDH 478

Query: 480 GK--KVITILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENR 533
           G+   +    +   +   + +G   +L +        A + A  +      +A  ++  R
Sbjct: 479 GEDPAMAPFTKPLQAGLNDLQGAVMWLMQNAFSKPDNAGAGATDFMHLFGLVALGYMWAR 538

Query: 534 FLDNCHSTHC 543
                 + H 
Sbjct: 539 IAKAAQAKHA 548


>gi|99080944|ref|YP_613098.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037224|gb|ABF63836.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 381

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 136/378 (35%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+     P    L  +    G                +           MA
Sbjct: 22  EHIAPFARQWESEGTIP--KDLWPKVGELGFGSLYVSEESGGSGLLRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+ +  +  +       + S              +  +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMS-------------LNTVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  + ++G Y L+G K F+S    SDA++ + +  G  G   +  L  
Sbjct: 127 PGSGSDAAALKTRASRDNEG-YVLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGISTLYV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
           +    GL +  L++K+G +S  T +++F +        +     G    MK L    L+ 
Sbjct: 185 EDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   +  L   + Y   R   G  +     ++  +AD+ +++ AA     + A   
Sbjct: 245 AACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+          A     + K +  +    V+ + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DQGSPD------ATKFCAMAKKFVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   +
Sbjct: 359 QILEGTNEIMRVIVARHM 376


>gi|167763198|ref|ZP_02435325.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC
           43183]
 gi|167698492|gb|EDS15071.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC
           43183]
          Length = 568

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/471 (19%), Positives = 175/471 (37%), Gaps = 48/471 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYDETNNCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKRDGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKCELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE----QLF--STLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+        +L   S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLRDYELIPCSEEMQPLLDRVKEMTNKFEA 488

Query: 490 SISLCKE------DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  KE         +AR L E  A+   +  L +       ++F ++  
Sbjct: 489 CTNAVKESGNQELLDFVARRLYEMAAVCVMSHLLIQDATTA-PEMFAKSAL 538


>gi|34497240|ref|NP_901455.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34103096|gb|AAQ59459.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 594

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/555 (19%), Positives = 195/555 (35%), Gaps = 64/555 (11%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK----VE 98
             +I   P           + + S   ++ A+        L+      G  +D     V 
Sbjct: 22  QDIIPTLPGYEEAT-----QDIFSAYLEQAAQFCESELAPLNRQGDEEGCHYDSATKSVT 76

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +    ++    G      D ++      ++       +   A +        S  +
Sbjct: 77  TPAGFKEAYKQYCELGFPALDCDPAYGGQGLPKSLGFPIMEMQCSANVAWSMYPGLSHGA 136

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S +    T      + PK+    +  T             + LTE   GTD+  + S+ 
Sbjct: 137 YSAIHAHGTDEQKAAYLPKLVDGSWTGT-------------MCLTEPHCGTDLGLLKSKA 183

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSP 267
           +   DG Y +SG K F+S+   D       ++LA++         +  F+VP+ L DGS 
Sbjct: 184 EPQEDGSYRISGTKIFISAGEHDLSENIIHLVLARLPDAPKDVKGISLFIVPKYLADGSR 243

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    L++K+G ++NAT  +      G+L+G+ N     +  M     L   +  +  
Sbjct: 244 NAVACGSLEHKMGIKANATAVINLDGAKGWLIGEANKGLSCMFTMMNAARLGCGMQGLGL 303

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT----- 370
              S   A+ YAR R                  +I  P ++R +        A       
Sbjct: 304 GEASFQGALAYARERLQMRALNGAKCPDKAADPIIVHPDVRRMLLTQKAYTEAGRALAAL 363

Query: 371 -ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            AL   + +   +A  R++ A    ++ P+ K +            ++  GG GYI E  
Sbjct: 364 LALQLDIEDKHPDAAVRADAADLVALLTPVAKAFMTDNGFVAANHGVQVFGGHGYIREWG 423

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDLGSSGK--K 482
           + +  R++  + I  G+     +D+L    LL++G  L  F +L  T  Q      +  +
Sbjct: 424 MEQLVRDARISQIYEGTNGIQAIDLLGRKVLLDQGAKLRKFTKLIHTFCQRHEGHPQLGE 483

Query: 483 VITILRDSISLCKEDK---GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
            +T L   +    E     G+A    +  A A++A  L   G   +   +L  R  +   
Sbjct: 484 FVTPLAKLMKEVGELTMGVGMASLQDKDEAGAAAADYLRLIGH--LTYAWLWARMAEVSF 541

Query: 540 STHCMLHGRFNAAHI 554
           +        F  A I
Sbjct: 542 AKLGQGDDAFYHAKI 556


>gi|307946601|ref|ZP_07661936.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307770265|gb|EFO29491.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 379

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 135/376 (35%), Gaps = 25/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     LR++   G                +                 
Sbjct: 26  PHAREWDENSVFPV--DTLRKAASLGFGGIYVREDVGGSALTRTDAAIIFEELSKGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +A M+    +  + + + P++ + E             +     LTE   G
Sbjct: 84  AAFISIHNMAAWMIDTFGSEELRQKYLPRMCTME-------------LIGSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++     D  Y L+G K F+S   +    +     G  G   +  ++ +    
Sbjct: 131 SDAASLRTKAVDDGDH-YVLNGSKAFISGGGASDLYVTMVRTGGEGPSGISCVVIEKDAP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   + K+G +S  T ++ F +        +G+                ++    S+
Sbjct: 190 GLSFGAQEIKMGWKSQPTAQVNFQDCRVPKANRIGNEGEGFKFAMAGLDGGRINIGACSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A  Y + R   G  L +   ++  +AD+A ++ AA  L  + A   D    
Sbjct: 250 GAAQTCLDRATEYLKERKQFGKALAEFQALQFRLADMATELEAARLLLLKAAGEVDA--- 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              ++A A  +A + K         V+ EA++  GG GY+ +  I R  R+   + IL G
Sbjct: 307 ---KSADANKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYPIERFLRDVRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEKG 461
           +   M + +   L KG
Sbjct: 364 TNEIMRVIIARHLLKG 379


>gi|229083243|ref|ZP_04215617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
 gi|228700049|gb|EEL52661.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2]
          Length = 569

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|145480065|ref|XP_001426055.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393127|emb|CAK58657.1| unnamed protein product [Paramecium tetraurelia]
          Length = 396

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 136/376 (36%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK  + P+   +L+     G       +    V                  +  
Sbjct: 47  PYASDWDKNNYLPS--QVLKELSEMGFATIYVKQELGGVGLDHLSASVIFEALSYGDITT 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     A ++A   T    K W P+I S                 +   LTE   G
Sbjct: 105 TATLAVQNLCAYLLANYGTEEQRKVWIPRINS-------------FDALVAYCLTEPNSG 151

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D   + +  +K     Y ++G K F+S   +SD ++++ +         V  +L +   
Sbjct: 152 SDNKNMETYAKKDGKD-YIINGIKCFISGGSVSDLYLIVCKT----SEKDVSSILVEKDT 206

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL + ++++K+G  ++ T  +   N        +     G    M  L    ++ +  S
Sbjct: 207 PGLSFGKVEDKMGWHASPTTRVILENVRVPQSNLVGKEGQGFKMGMSALDGGRINISSCS 266

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G  ++L  A  Y + R   G  L +   ++   AD+A  +  +  +  + A   DE +
Sbjct: 267 LGGASLALDLAKDYLQDRKQFGQQLSNFQGLQFKFADMAASLVTSRLIVRQAAMKLDENQ 326

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     +   + K +       V  +A++  GG GY+ E  I R  R+   + IL 
Sbjct: 327 IDK------SLYVSMAKTYATDSCFDVANDALQLHGGYGYLREYQIERIVRDLRVHKILE 380

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M + +   L K
Sbjct: 381 GTNEIMRMIIARNLLK 396


>gi|111334|pir||B30605 acyl-CoA dehydrogenase (EC 1.3.99.3) precursor,
           short-chain-specific - rat
          Length = 412

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 140/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|21220196|ref|NP_625975.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|5441775|emb|CAB46799.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 383

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 133/374 (35%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E      +L+++    G      D  +                        
Sbjct: 26  PHVVEWDRAEEVD--RSLVKKLGEVGFLGLTIDEQYGGSGGDHLAYCLVTEELGRGDSSV 83

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S S+   A  +A        + W P + S EY                 GLTE   
Sbjct: 84  RGIVSVSLGLVAKTIAAWGDEEQKRRWLPGLTSGEY-------------VGCFGLTEPGT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D   +T++  +  D         +  +   +D  ++ A+     G   V   L     
Sbjct: 131 GSDAGNLTTRAVRDGDDYVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPTDT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDSAIMS 324
            GL  + +  K+G R  AT EL   +        L     G    M  L    +  A   
Sbjct: 191 PGLTRRTIHGKLGLRGQATAELVLEDVRVPASAMLAPEGKGFSVAMSALAKGRMSVAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ YA  R   G  +    +++  I+DIALD+ AA  L++R+A+  D  +
Sbjct: 251 VGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVADLIDRGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E++ A       K +  + A      A++  G  GYI+E    +  R++   ++  
Sbjct: 311 PFAVESSKA-------KLFASEAAVRAANNALQVFGAYGYIDEYPAGKLLRDARVMTLYE 363

Query: 445 GSGNAMVLDVLNLL 458
           G+     L +   L
Sbjct: 364 GTSQIQKLVIGRAL 377


>gi|256060548|ref|ZP_05450716.1| Acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261324543|ref|ZP_05963740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261300523|gb|EEY04020.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
          Length = 592

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 180/494 (36%), Gaps = 58/494 (11%)

Query: 60  LLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFH-PAWHALLRRSIHDGLH 116
                + +   +E  + A +   P        G    D V    P W  L R  I  G +
Sbjct: 30  EFSADLAAAILEEAGKFAADRIEPLRITGDKNGATVKDGVVTTAPGWKELYRDWIAGGWN 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  + ++    L      + ++ +   +    +  +   +  
Sbjct: 90  SLTGTPEYGGQGLPTMMSVAVSEMWNSGTLAFAIAPTLTMGAVEALEKHASRELKDIYLE 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F++
Sbjct: 150 KLISGEWMGT-------------MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFIT 196

Query: 237 SPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA++         +  FLVP+ L +     G  N L    L++K+G
Sbjct: 197 YGEHDLTDNIVHLVLARLPDAPAGTKGISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMG 256

Query: 281 NRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             ++ T  + + +           G+L+G+ N     +  M     L   I  V     +
Sbjct: 257 IHASPTCTMIYGDGFVKGEEQGAVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAA 316

Query: 332 LAEAIHYARRRHVSGG----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +A+ YA+ R                +I+ P ++R +  +      A ++++  A++ D
Sbjct: 317 YQQALAYAKERKQGRALGADPKQGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAID 376

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +       +  A ++ P+ K +    +  V +  ++  GG G+IEE   A+  R+
Sbjct: 377 MSHVTDGADAQFWSDRAGLLTPLAKSFATDASVDVSSLGIQIHGGMGFIEETGAAQLLRD 436

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +    I  G+       L +  L  +  +  +   + L+ D   +       L ++ +  
Sbjct: 437 ARITPIYEGTNGIQAIDLVMRKLPLQKGDHIKGFLAELQGDADKATASNRAELGETGARL 496

Query: 495 KEDKGLARFLTEKI 508
            +    AR  T+ +
Sbjct: 497 SKAISDAREATDWL 510


>gi|149377503|ref|ZP_01895244.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358195|gb|EDM46676.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 596

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 85/495 (17%), Positives = 172/495 (34%), Gaps = 66/495 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D  F LN+         + + +L  +L     +V     + + E     T+  LA +   
Sbjct: 10  DMRFVLNEV--------FDAPALWASLPKVAENVDPDTADAILEEAGKITSGVLAPLNRE 61

Query: 80  NTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                      G +W+  +V     +    +  +  G +    +  F  +   +    + 
Sbjct: 62  G-------DEQGCKWNDGEVSTPEGFREAYQTIVEGGWNGLGGNPEFGGMGMPKTLVAQF 114

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +   A +  G     +  +   +    +  + + + P +++  +             +
Sbjct: 115 EEMMQAANMAFGLAPMLTAGACLALDAHGSQELKEKYLPNMYAGTW-------------S 161

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG- 251
             + LTE   GTD+  I ++ +   DG + ++G K F++    D       ++LA++   
Sbjct: 162 GAMDLTEPHAGTDLGIIRTKAEPNGDGSFSVTGTKIFITWGEHDMAENIIHLVLAKLPDA 221

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                 +  FLVP+   +     G  N L    L+ K+G + +AT  + F    G+L+G+
Sbjct: 222 PKGPKGISLFLVPKFDVNEDGSLGERNSLSCGSLEKKMGIKGSATCVMNFDGAKGWLVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------IL 349
            N     +  M     L   I  +     SL  A  YA  R  S               +
Sbjct: 282 ENKGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYALERIQSRAPTGAQQPEKAADPI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYW 403
           +  P ++R +  +   +    A S  +A   D AK       R        ++ P+ K +
Sbjct: 342 LVHPDVRRMLLTMKGYVEGGRAFSTYVAQWLDIAKYSDDDERRKHAEGMVALLTPVAKAF 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
                        +  GG G+I E    +  R+     I  G+     LD++     G+ 
Sbjct: 402 LTDRGLDACIMGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGSQ 461

Query: 464 LFEQLFSTLEQDLGS 478
              +L+    +D+ +
Sbjct: 462 --GKLYELFAEDVAT 474


>gi|302561781|ref|ZP_07314123.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479399|gb|EFL42492.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 390

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 63/343 (18%), Positives = 124/343 (36%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D ++    +     ++       A+L  G  +S    ++  +A         ++ P +
Sbjct: 63  PYDAAYGGGDQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALAAFGAKEQQAEYLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPSSGSDAASLRTRAVRDGDDWVITGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           ++D + ++A+  G  G   +   L  G   GL     + K+G + + T ++         
Sbjct: 170 IADFYTVMART-GEEGPRGISAFLVPGDAEGLGAAVPEKKMGMKGSPTAQVHLDGVRVPD 228

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+                L  A  ++   + +L EA+ YA  R   G  + D   +
Sbjct: 229 ARRIGEEGQGFAIALSALDGGRLGIAACAIGLAQAALDEALGYATERRQFGKPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D  +  +++AA A       K  C   A  V  +A
Sbjct: 289 RFMLADMATQIEAGRALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +    R  RE+    I+ G+     + +   L
Sbjct: 342 VQVLGGYGYTADFPAERLMREAKVLQIVEGTNQIQRMVIARHL 384


>gi|229069862|ref|ZP_04203144.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228713265|gb|EEL65158.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 569

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 139/374 (37%), Gaps = 30/374 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFE 466
            V  +L K     E
Sbjct: 404 TVAKMLMKQIEQLE 417


>gi|262196959|ref|YP_003268168.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080306|gb|ACY16275.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 386

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 142/401 (35%), Gaps = 30/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              L+   + + R A     ++ A  P  E  D+    P     LR     GL       
Sbjct: 2   RLALTEEQELIQRTAREFASRVLA--PRAEARDREGSFPE--QELRALAELGLLGVTVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S             A R    A       +S +   A++VA + +    K   P++    
Sbjct: 58  SLGGAEADTVAYSLAMRELARADASVAVAVSVTNMVAALVAQVGSEAQRKQHVPRLVDGS 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           Y            V     L+E + G+D +A+ +   +   G       +W      +  
Sbjct: 118 Y------------VCGAFALSEPQAGSDPSAMRTSATRTGSGWRLRGSKQWITGGDRAGV 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A  +   G   +   L  G   GL   R ++K+G   + TV L F +        L
Sbjct: 166 MVVWAVTDAEAGNRGISAFLVPGGAAGLSVSRSEDKMGLHGSTTVGLSFDDVEVGEDALL 225

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357
                  +    ++ LD   + +S   + +AE     A+ YA  R   G  +     + +
Sbjct: 226 GREGEGFK--LAMMALDGGRIGISSQAIGIAEGALDAAVAYACERVQFGKPIGQHQGVSQ 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD A  + AA  L+ R A   DE K  S+EA+ A       K +  + A  +   A++
Sbjct: 284 MLADAATWLDAAKLLTLRAAARKDEGKPFSQEASMA-------KLFSTEHAGRICDIALQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY  +  + R YR+     I  G+     + +   L
Sbjct: 337 VHGGYGYTRDFPVERAYRDVRVTRIYEGTSEIQRIVIARRL 377


>gi|229109774|ref|ZP_04239359.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
 gi|228673619|gb|EEL28878.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15]
          Length = 569

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHHYILLAKKLLKQSLKTLSKTPGL 455


>gi|317130139|ref|YP_004096421.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475087|gb|ADU31690.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 593

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 151/419 (36%), Gaps = 50/419 (11%)

Query: 93  RWDKVEFH--PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
             +K+E H       LL+ +   GL  +     +  +   + +  +   +  L       
Sbjct: 51  EIEKIEEHQFDISVRLLKEAGELGLLGADVPEEYGGIGLDKISSSLITEKFALAGSFSLS 110

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           H     + +   +         + + P++ S E                   LTE   G+
Sbjct: 111 HGAHVGIGT-LPIVFFGNEEQKQKYLPELASGE-------------KIAAYALTEPSSGS 156

Query: 210 DIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           D     +  +    G  Y L+G K W  ++  +D F++ A+V+G          + +   
Sbjct: 157 DALGAKTTAKLNDAGTHYVLNGEKQWITNAGFADVFVVYAKVDGEQ----FTTFILERDY 212

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+     + K+G + ++T  L   +    +   L  +  G V    IL        +  
Sbjct: 213 EGVSTGPEEKKMGIKGSSTRTLILEDALVPIENVLGEIGKGHVIAFNILNIGRWKLGVGC 272

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-- 382
           V G ++ +  +  YA  R      +    ++++ +A++A    AA +  +R     DE  
Sbjct: 273 VGGAKLGIELSAKYANERKQFKRPISKFTLIQKKLAEMAAKTYAAESTIYRTGGLIDEAF 332

Query: 383 ----------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                      K+  +  A   I   + K +  ++   V  EA++  GG G++ E  +  
Sbjct: 333 QALSAEQQKDGKAVGKAIAEYAIECSLNKVFGSEVLDFVADEAVQIHGGYGFMAEYEVET 392

Query: 433 HYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSS 479
            YR S  N I  G+     + V            L LLE+  +L E+L   + Q++G  
Sbjct: 393 MYRNSRINRIFEGTNEINRMLVPATIMRKAMKGELPLLEQAGSLQEELMMMMPQEVGDD 451


>gi|224368635|ref|YP_002602798.1| Acd5 [Desulfobacterium autotrophicum HRM2]
 gi|223691351|gb|ACN14634.1| Acd5 [Desulfobacterium autotrophicum HRM2]
          Length = 602

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/454 (20%), Positives = 174/454 (38%), Gaps = 57/454 (12%)

Query: 82  PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P L      G R++  +V+   ++H   +  I         D ++          I    
Sbjct: 55  PTLADSDQNGARFENGQVKAPESFHRARKAVIEAEFTSPTEDPAWGGQGLPYLISIAMME 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             + A       ++    +  M+ +  T R+   +   +++  +  T             
Sbjct: 115 YVIGANYALSSYVNMGHGTGKMIEIFGTDRLKALFVENLYTAHWSGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE   G+D+ A+T+  +K  DG Y ++G+K F++    D        +LA+VEG   
Sbjct: 162 MLLTEPEAGSDVGALTTSAKKNPDGTYSITGNKIFITGGDHDLAENIIHPVLARVEGAPS 221

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLG 300
               +  F+VP++  +     G  N +    ++ K+G   +AT  +      N  GFLLG
Sbjct: 222 GSKGISIFIVPKIWVNDDKSLGKNNDVQCTGIEEKMGMHGSATCSMSLGSKGNCRGFLLG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------- 347
             N     +  M     L+      S   ++   A+ YA++R   G              
Sbjct: 282 QENQGLAIMFHMMNEARLNVGFQGSSAASMAYLYALDYAKQRIQ-GKALHDMKNPEAKSV 340

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401
            +I  P ++R +  +   +    +L F ++N FD      +     +      ++ PI K
Sbjct: 341 PIIQHPDVRRMLTWMKAHVDGMRSLVFYVSNLFDTQGLFPDTPEGEQAGKLIELLTPIVK 400

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLE 459
            +C +    V  +A++  GG GYI E  + +  R+    SI  G+     +D+L   L  
Sbjct: 401 AYCAQRGFEVCVQAVQVHGGYGYISEFPVEQLVRDVKIASIYEGTDGIQAMDLLARKLGM 460

Query: 460 KGTNLFEQLFSTLEQDLGSS-GKKVITILRDSIS 492
            G  +F  L   + + + S+     +  L D + 
Sbjct: 461 DGGKVFTGLLEIIGKTIKSAQDNTTLAPLADELE 494


>gi|323473995|gb|ADX84601.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
          Length = 546

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/496 (21%), Positives = 211/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFFIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKTTTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|121596068|ref|YP_987964.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42]
 gi|120608148|gb|ABM43888.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42]
          Length = 396

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 141/398 (35%), Gaps = 28/398 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 15  GEDIDALRDAVREFAQAE-IAPRAAEIDRNDQFPM--DLWRKFGDLGVLGITVPEQYGGA 71

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +         K + PK+ S E+   
Sbjct: 72  DMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGNEAQRKKYLPKLISGEH--- 128

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 129 ----------VGALAMSEPGAGSDVISMKLRAEDKGGYYLLNGSKMWITNGPDADTLVVY 178

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N         NV  
Sbjct: 179 AKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGELVFQNVEVPA---ENVLG 235

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+L+  LD     ++G  + + ++     + Y   R   G  + +  +++  +A
Sbjct: 236 GVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A  + ++ +A + D     S+     R        WC + A  +  E ++  G
Sbjct: 296 DMYTVLQAGRSFAYTVAKNLDM--LGSDHVRQVRKDCASVILWCAEKATWMAGEGVQIYG 353

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E  + R +R++    I  G+     + +   L
Sbjct: 354 GNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 391


>gi|58581466|ref|YP_200482.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426060|gb|AAW75097.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 407

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 128/381 (33%), Gaps = 25/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD     P     + ++   G      D     +  ++                 
Sbjct: 49  PHAAQWDAEGHFP--REAIAKAAALGFCGLYTDHGVGGLGMRRLDAAVVFEELATVDPST 106

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S        +A   T  V   W   + S              +      LTE   G
Sbjct: 107 SAFISIHNMVTWFIASYGTDAVRAQWGEAMTSG-------------AKLGSYCLTEPGSG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ S+ Q+  D  Y L+G K F+S   +   +++    G  G   +          
Sbjct: 154 SDAASLKSRAQRDGD-SYVLNGSKAFISGAGATDVLVVMARTGEDGARGISAFAVPADAP 212

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+ Y R + K+G  S  T  +   N        L     G    MK L    ++ A  S+
Sbjct: 213 GISYGRKEEKMGWNSQPTRGVTLENVRIPAENLLGKEGEGFKMAMKALDGGRINIAACSL 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  Y   R   G  L D   ++  +AD+A  + AA  +    A   D    
Sbjct: 273 GAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVHTAARKLDAGSH 332

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A +   + K +      A+  +A++  GG GYI E  I R  R+S  + IL G
Sbjct: 333 D------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLRDSRVHRILEG 386

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +   M + V   L  G     
Sbjct: 387 TNEVMRMIVARHLLNGEEELR 407


>gi|167033807|ref|YP_001669038.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166860295|gb|ABY98702.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 592

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 94/522 (18%), Positives = 183/522 (35%), Gaps = 63/522 (12%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-----NYNTPQ 83
           P    M+      LL   + + P+   +    L E V   TA+ +   A         P 
Sbjct: 6   PPLRDMDF-----LLNE-VFDIPTWWAQT-PALAEVVDGDTARAILEQAGKLIAERVAPL 58

Query: 84  LHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
             +    G RW+  +V     +    R    DG         +  +   +    +   + 
Sbjct: 59  NRSGDEQGCRWEAGQVRTPDGFADAYRAFATDGWVGVAGAPEYGGMGMPKVIGAQLEEML 118

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L  G     +  +   +    +  +   + P ++   +                + 
Sbjct: 119 NAANLSFGLYPMLTAGACLALLNHASEPLKALYLPPMYQGRW-------------TGSMC 165

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   GTD+  I ++ + I++G Y +SG K F++    D       ++LA++       
Sbjct: 166 LTEPHAGTDLGLIRTRAEPIAEGCYRISGTKIFITGGEQDLTENIIHLVLARLPDAPAGP 225

Query: 252 -RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP++L D     G  N +    +++K+G +++AT  + F    G+L+G+ N  
Sbjct: 226 KGISLFLVPKVLVDADGALGEANAVSCGSIEHKMGIKASATCVMNFDGATGYLVGEPNKG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  M     L   I  ++    S   AI YAR R                  ++  P
Sbjct: 286 LNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPTGAEALAQHADPIVVHP 345

Query: 354 VMKRAIADIALDIAAAT------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++R +  +              AL   LA   D+  + ++  A   ++ P+ K +   M
Sbjct: 346 DVRRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDLAACAKAEAKVALLTPVAKAFLTDM 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                    + +GG GYI E    +  R+     I  G+     LD++   LL  G   +
Sbjct: 406 GLETTVHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLVGRKLLGDGGKAY 465

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             +   +     +   +        ++       L+ +L ++
Sbjct: 466 LGVSDEMVAFAEALPVEHAEFAAPLLAAVHNLDELSAWLLDR 507


>gi|154253221|ref|YP_001414045.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157171|gb|ABS64388.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 390

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 143/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   A+     + A+      P     D+    P    L  +    GL     +  +  
Sbjct: 12  DLGETADMIRDTVRAFTADKISPRAAEIDRTNEFP--RDLWPQLGELGLLGITVEEEYGG 69

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H +    +   +        + S    + +    T    + +  K+ S E+  
Sbjct: 70  TGLGYLEHVVAMEEISRGSASVGLSYGAHSNLCVNQLRRWGTDAQKRKYLTKLMSGEH-- 127

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K  D         W  ++P ++  I+
Sbjct: 128 -----------VGALAMSEPGAGSDVVSMRLKAEKKGDRFVLNGSKMWITNAPDAETLIV 176

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +   G   +   L +    G    +  +K+G R + T EL F +        L   
Sbjct: 177 YAKTDASAGPKGITPFLIEKGMKGFRPAQKLDKLGMRGSNTAELVFEDCEVPEENVLGKL 236

Query: 306 TGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
              V  +   +  + A+++   +  M+  +   I Y   R   G  +    +M+  +AD+
Sbjct: 237 NEGVRVLMSGLDYERAVLAAGPLGIMQACMDAVIPYVHERKQFGEPIGTFQLMQGKLADM 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A  A  + +A + D  ++  ++AA A         +  + A  +  EA++ +GG+
Sbjct: 297 YSTMNACRAYVYAVAKACDRGQTTRKDAAGA-------ILYAAEKATWMALEAIQALGGN 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GYI + S  R  R++    I  G+     + +   L   T 
Sbjct: 350 GYINDYSTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETA 390


>gi|160876083|ref|YP_001555399.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160861605|gb|ABX50139.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315268279|gb|ADT95132.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 389

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 150/407 (36%), Gaps = 43/407 (10%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  L    Q+ A  AN   P          + D     P  + L       GL   
Sbjct: 12  LGEDVDMLRDAVQDFA--ANEIAPI-------AAKVDHDNAFP--NELWPVLGSMGLLGV 60

Query: 119 IWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                F    +   AH +    +   +        + S    + +           + PK
Sbjct: 61  TVAEEFGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPK 120

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++    +K  D         W  + 
Sbjct: 121 LVSGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRFILNGNKMWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +    
Sbjct: 168 PDAHTYVIYAKTDLTKGAHGITAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDVEVP 227

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
              + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +
Sbjct: 228 ---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGE 284

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +
Sbjct: 285 FQLVQGKLADMYTGMNAAKSYVYNVAKSCDRGETTRKDAAGA-------ILYSAELATKM 337

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 338 ALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|209521640|ref|ZP_03270334.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209497918|gb|EDZ98079.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 600

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 87/458 (18%), Positives = 168/458 (36%), Gaps = 58/458 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLH 116
                   +E AR+   +   L      G+R      D V    P +    R+    G  
Sbjct: 34  ADTARAVLEEAARL---HEGVLAPLNVDGDRNPSTWKDGVVTATPGFKDAFRQFTEGGWQ 90

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +      +        +   A L  G     +  +   +    +  + + + P
Sbjct: 91  GLQHPSEYGGQDLPKLLSTPCIEMLNAANLSLGLCPLLTDGAIEALLTAGSEELKQRYVP 150

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S  +  T             + LTE + G+D++ + S+ +   DG Y + G K F++
Sbjct: 151 KMISGVWTGT-------------MNLTEPQAGSDLSLVRSRAEPQGDGSYRIFGTKIFIT 197

Query: 237 SPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
               D       ++LA+          +  F+VP+ L +     G  N +    +++K+G
Sbjct: 198 WGEHDMTENIVHLVLARTPSAPEGVKGISLFVVPKFLVNEDGSLGERNDVHCVSIEHKLG 257

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T  L+F +     G L+G+ N     +  M         +  V+    +  +A+ 
Sbjct: 258 IKASPTAVLQFGDHGGAIGQLVGEENRGLEYMFIMMNAARFAVGVQGVAISDRAYQQAVA 317

Query: 338 YARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           YA+ R  S            +I  P ++R ++ +      A AL++  A   D A    +
Sbjct: 318 YAKERVQSRPVDGSAKQSVTIIQHPDVRRMLSTMRALTEGARALAYVSAAHCDLAHRHPD 377

Query: 389 EAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           E   A   A      PI K W  +M+  V +  ++  GG G+IEE   A++YR++    I
Sbjct: 378 ELTRANHQAIYEYLVPIVKGWSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDARILPI 437

Query: 443 LLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGS 478
             G+       L     +     +   L + ++  L +
Sbjct: 438 YEGTTAIQANDLVGRKTMRDNGEVAAMLLAQIDVTLAA 475


>gi|294862190|dbj|BAJ05798.1| short-chain acyl-CoA dehydrogenase precursor [Homo sapiens]
          Length = 412

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRDCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|312195699|ref|YP_004015760.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227035|gb|ADP79890.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 395

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 141/374 (37%), Gaps = 30/374 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             ++ +  PA  +L   +   GL        +  +    + ++R              + 
Sbjct: 38  EIEETDAMPA--SLRAEAAEMGLFGFAIPELYGGLGLSMSEEVRLVYELGYTTPSFRSMF 95

Query: 153 SPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
             +   A  V L   T    K W PK+ S E+                  LTE   G+D 
Sbjct: 96  GTNNGIAGHVLLEGATEEQKKTWLPKVASGEW-------------TASFALTESGAGSDP 142

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
           + +T+   +  D        ++  ++P++D F++ A+ +        +   + +    GL
Sbjct: 143 SGLTTTAVRDGDEWVINGSKRFITNAPLADVFMVFARTDPEAASSRGISTFMVEKGTPGL 202

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDSAIMS 324
                 +K+G     T ++ F N        + G+  V  G    M+ L    +  A + 
Sbjct: 203 SVGPRDHKMGQAGAWTADVYFDNVRVPSSVLIGGEAGVGRGYATAMRCLAHGRIHIAALC 262

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   +  + E++ YA  R   GG++    +++  IAD A D+ AA AL   +A  FD+  
Sbjct: 263 VGMSQRLVDESVAYAATREQGGGVIGSHQLIQGLIADSATDLYAARALVSDVAAKFDDGS 322

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +       RI     KY+  +    +   A++  GGSGYI    + R YR++    I  
Sbjct: 323 DK-------RIGPSCAKYFASEAVGRIADRAVQIHGGSGYIRGVPVERFYRDARLFRIYE 375

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 376 GTSQIQQIVIARGL 389


>gi|332261787|ref|XP_003279948.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 588

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/483 (17%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 52  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 109

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 110 AAHQANGLKGIVLAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 156

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 157 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 215

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 216 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPV---ENILGEVGDGFKVAMNILNSGRF 272

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 273 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 332

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++ 
Sbjct: 333 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTR 387

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    +   LRDS+    +
Sbjct: 388 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTIGRRLRDSLGRTVD 447

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 448 LGLTGNRGVVHPSLADSANKFEENTYYFGKTVETLLLRFGKTIMEEQLVLKRLANILINL 507

Query: 542 HCM 544
           + M
Sbjct: 508 YGM 510


>gi|264678921|ref|YP_003278828.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209434|gb|ACY33532.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 388

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/406 (17%), Positives = 138/406 (33%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +      WD+    P     + ++   G       
Sbjct: 2   DFELSEDQRAFADTARAFAQAELAPH---AAEWDREHIFP--REAIAKAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    T  V   W   + S 
Sbjct: 57  ESIGGLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRAQWGEALTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        S      LTE   G+D A++ ++ + + +         +   +  +D
Sbjct: 117 -------------SKLASYCLTEPGAGSDAASLKTRAELVGNEYIVNGSKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  +   G   +          G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVLMARTGDAGSGASGISAFAVPADAAGVSYGKKEEKMGWNSQPTRVISFDNVRIPAHN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L +A  Y + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKAIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V  EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFMVCNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   + +G  
Sbjct: 338 LHGGYGYIREYPLERLMRDARVHQILEGTNEIMRVIIARRMLEGDA 383


>gi|24373462|ref|NP_717505.1| isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1]
 gi|24347753|gb|AAN54949.1|AE015633_1 isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1]
          Length = 389

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 153/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A ++  Q H   P   + D     P  + +       GL     
Sbjct: 12  LGEDV------DMLRDAVHDFAQ-HEIAPIAAKVDHDNAFP--NEIWPVLGGMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  PEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 ANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|227826884|ref|YP_002828663.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227458679|gb|ACP37365.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
          Length = 546

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/496 (21%), Positives = 211/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFLIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKATTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|15898411|ref|NP_343016.1| partial transposase ISC1225 [Sulfolobus solfataricus P2]
 gi|229582993|ref|YP_002841392.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238619012|ref|YP_002913837.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|13814828|gb|AAK41806.1| Partial transposase ISC1225 [Sulfolobus solfataricus P2]
 gi|228013709|gb|ACP49470.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238380081|gb|ACR41169.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 546

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/496 (21%), Positives = 211/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFLIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKATTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|149185012|ref|ZP_01863329.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831123|gb|EDL49557.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 388

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 150/392 (38%), Gaps = 32/392 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           + + R A+          P  E+ D+ ++ P    L       GLH          +   
Sbjct: 20  ESVGRFAD------EQIQPLAEKVDREDWFP--RDLWPAMGELGLHGITVAEEDSGLGLG 71

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +A          + PK+ S E+      
Sbjct: 72  YLEHVIAVEEVSRASASVGLSYGAHSNLCVNQIARWGNEAQKAKYLPKLISGEH------ 125

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++ ++ +K+  G        W  ++P +D  ++ A+ 
Sbjct: 126 -------VGSLAMSEAGAGSDVVSMKAKAEKVDGGYILNGTKFWITNAPYADTLVVYAKT 178

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
                   +   L +   +G    +   K+G R + T EL F + F     ++G  N   
Sbjct: 179 APEAASRGITTFLIEKDFDGFSIGQKIEKVGMRGSPTAELVFDDCFVPEENVMGPENGGV 238

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G +        +  A + +  M+  L   I Y R R   G  +    +M+  +AD+ + +
Sbjct: 239 GVLMSGLDYERVVLAGLQLGVMQACLDTVIPYLRERKQFGKFIGSFQLMQAKVADMYVAL 298

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +A A ++ +A S D  K+   +AA A ++A        + A  V AE+++ +GG+GY  
Sbjct: 299 QSARAYTYAVAKSCDANKTTRFDAAGAILLA-------SENAFRVAAESVQALGGAGYTL 351

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R+ R++    I  G+     + +   L
Sbjct: 352 DWPVERYMRDAKLLDIGAGTNEIRRMLIGREL 383


>gi|189197671|ref|XP_001935173.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981121|gb|EDU47747.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 398

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 142/381 (37%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+ E   PA   ++ +    GL        +          I A          
Sbjct: 41  PKAREMDEAEAMDPA---IVEQLFEQGLMGIEIPEEYGGSGMNFTSAIIAIEELARVDPS 97

Query: 148 AGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              L     T   + +    + ++ K+W PK+               T+      L+E  
Sbjct: 98  VSVLCDVHNTLVNTAILKWGSEKLKKEWLPKL--------------ATNTVGSFCLSEPV 143

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A+ ++  +   G        W  +S  ++ FI+ A ++       +   + +  
Sbjct: 144 SGSDAFALATKATRTDTGYKISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKG 203

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G    + + K+G ++++T  + F +     +   N+     E  K  I  L+   + +
Sbjct: 204 TPGFAIAKKEKKLGIKASSTCVITFDDV---EIPRENLLGNEFEGYKYAIGLLNEGRIGI 260

Query: 326 SGMRVSLAEAIH-----YA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +     LA         YA   R   G ++ +   M+  +A    +I AA AL +  A  
Sbjct: 261 AAQMTGLALGAWENAASYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARK 320

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +    +AA A++MA        ++A  V  +A+E +GG G++ E    +++R+S  
Sbjct: 321 KEAGEDFITDAAMAKLMA-------SQVAGRVSGQAIEWMGGMGFVREGLAEKYFRDSKI 373

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +   L+K
Sbjct: 374 GAIYEGTSNIQLTTIGKALQK 394


>gi|295664346|ref|XP_002792725.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226278839|gb|EEH34405.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 439

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/385 (20%), Positives = 136/385 (35%), Gaps = 36/385 (9%)

Query: 85  HAYGPGGERWDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+ E  HPA   ++ +    GL        F          I        
Sbjct: 78  EQIGPKVRDMDEAETMHPA---VIEQLFEQGLMGVEIPEEFGGAGMNFTSAIVGIEELAR 134

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  L     T   + +         K W PK+               T       L
Sbjct: 135 VDPSVSVLCDVHNTLVNTAILRFADAATKKKWLPKL--------------ATDTVGSFCL 180

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D  A+ ++  K S G        W  +S  +  FI+ A ++   G   +   +
Sbjct: 181 SEPASGSDAFALQTKAVKTSSGYKISGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFI 240

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+  
Sbjct: 241 VEKGTPGFSIAKKEKKLGIRASSTCVLNFDDV---EISKENLIGVEGQGYKYAINLLNEG 297

Query: 322 IMSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            + ++     LA              R   G ++ +   M+  +A    +IAAA AL F 
Sbjct: 298 RIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVFN 357

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R
Sbjct: 358 AARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGSAVEWMGGMGFVREGIAEKMFR 410

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   +I  G+ N  +  +  LL+K
Sbjct: 411 DSKIGAIYEGTSNIQLQTIAKLLQK 435


>gi|183982003|ref|YP_001850294.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M]
 gi|183175329|gb|ACC40439.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M]
          Length = 386

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 143/382 (37%), Gaps = 31/382 (8%)

Query: 84  LHAY-GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L  +  P  + W+K +       L   +   G         +                  
Sbjct: 27  LERHVAPYHDEWEKAKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNPDFRYNTIITEET 84

Query: 143 MA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            A      G  +   + +  ++AL  T    + W PK  + E+                +
Sbjct: 85  SAGRYSGIGFGLHNDIVAPYLLAL-ATEEQKQRWLPKFCTGEF-------------ITAI 130

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   G     
Sbjct: 131 AMTEPGTGSDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEKGAQGFS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
            L+ +    G    R  +KIG  +  T EL FS+    +   L     G +  M+ L   
Sbjct: 190 LLVVERGMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLMQNLPQE 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  AIM+ +GM   L + + Y + R   G  + +    +  +A++A +      +    
Sbjct: 250 RISIAIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELATEATMVRIMVDEF 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                + K  +E+AA A+        +  +   ++    ++  GG GY+ E  +AR Y +
Sbjct: 310 IELHLDGKLTAEQAAMAKW-------YSTEKQVSLNDRCLQLHGGYGYMREYPVARAYLD 362

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           S   +I  G+   M   +   L
Sbjct: 363 SRVQTIYGGTTEIMKEIIGRSL 384


>gi|296268514|ref|YP_003651146.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091301|gb|ADG87253.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 134/373 (35%), Gaps = 34/373 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEA 148
           V  H  W         + +++   GL        +     R   +        + A    
Sbjct: 26  VPHHAQWEKDGIVPRDVWKKAGELGLFALSVPEQYGGSGIRDFRYNAVLDEEIIRAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +   A  +  +T     + W P   S E             +   + +TE   G
Sbjct: 86  LGFSLHNDVVAPYLLDLTNDEQKERWLPGFVSGE-------------LITAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I +   +  D  Y L+G K F+++ + +D  I++A+ +   G   +  L+ +   
Sbjct: 133 SDLQGIRTTAIRDGDH-YVLNGQKTFITNGINADLVIVVAKTDPSAGARGITLLVVERGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIM 323
            G    R   KIG  +  T EL F N    +   L      G ++ M+ L    L  A+ 
Sbjct: 192 EGFTRGRNLEKIGLHAQDTAELFFDNVRVPVANRLGPEEGQGFIQLMQNLPQERLSIAVA 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     L   I Y R R   G  +      +  +A++A ++  A     +   + +  
Sbjct: 252 AVAASERVLEMTIEYCRNRKAFGRSIGSFQNTRFVLAELATEVEIARHYVDKCIRALNAG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + +AA A+        W   +   VI   ++  GG GY+ E  +A+ + +    SI 
Sbjct: 312 ELTAVDAAKAKW-------WTTDLQNKVIDRCLQLHGGYGYMLEYPVAKAWLDGRVQSIY 364

Query: 444 LGSGNAMVLDVLN 456
            G+   M   +  
Sbjct: 365 GGTNEIMKEIIGR 377


>gi|260431589|ref|ZP_05785560.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415417|gb|EEX08676.1| acyl-CoA dehydrogenase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 584

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/526 (19%), Positives = 191/526 (36%), Gaps = 57/526 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +   +         P VV   L   G+         L R  + +  +L      G     
Sbjct: 37  FKDVAATEKFAEATPDVVSAILTEAGKMC-EEVMAPLQRPGDLHPARLE----NGV---- 87

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +   P +    +     G      D  +  +            +   A L        S 
Sbjct: 88  LRTSPGYADGWKAIAEGGWIGMSGDPEYGGMGLPMTVTTAVNEMMSAACLSLQLAPLMSQ 147

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +  +   + PK+ S E+  T             + LTE + G+D+ A+TS
Sbjct: 148 GQIEALEHHASEELKALYLPKLMSGEWSGT-------------MNLTEPQAGSDVGALTS 194

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED- 264
           + +   DG Y ++G K ++S   +D       ++LA++         +  FLVP+ + D 
Sbjct: 195 KAEPNGDGTYSVTGQKIYISWGDNDFCENVCHLVLARLPDGAPGTKGISLFLVPKFIPDE 254

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L++K+G   + T  +++    G+L+G  +     +  M     L  
Sbjct: 255 NGNPGVANDLKVVSLEHKMGLHGSPTCVMQYDGAKGWLVGQEHKGMAAMFTMMNNARLGV 314

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLA 377
               V     +   A+ YA  R         +ID   ++R + D+  D+ AA A+    A
Sbjct: 315 GGQGVGAAEGAYQHALAYALERKQGKTPSGTIIDHADVRRMLMDMRADLFAARAIMLANA 374

Query: 378 NSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            + D AK+   ++ AA A ++ PI K +  +    V    ++  GG GYIEE   A++YR
Sbjct: 375 AATDMAKATGNADWAARAALLTPICKAFGTQTGMRVAETGLQVHGGMGYIEETGAAQYYR 434

Query: 436 ESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ----------DLGSSGKKVI 484
           +    +I  G+     +D++   +  G     +L   +E           +L     +  
Sbjct: 435 DVRVTAIYEGTNGIQAMDLVGRKMMDGGEAAARLLDEIEDHAERARATVPELAGPVWEAT 494

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYR---AGMNDIAD 527
             LR++       + +       +A  ++ A +       +  +AD
Sbjct: 495 ESLREATEWLVAQEDMNNRFAGAVAYLNAFARVLGAHYHLIAALAD 540


>gi|295394569|ref|ZP_06804789.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972579|gb|EFG48434.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 384

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 138/372 (37%), Gaps = 29/372 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           RW   E H        ++   GL C      +       AH+    +        A    
Sbjct: 36  RW--AEEHKIDREFWNKAGELGLLCVSIPEEYGGGGGTFAHEAVVLQEQGYIGDAAWGYA 93

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S   A  +  + T    K W P + S E             +   + +TE   G+D+ 
Sbjct: 94  VHSTIVAHYINAIGTEEQKKRWLPGLASGE-------------LVGAIAMTEPGTGSDLQ 140

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGL 270
           A+ ++      G Y ++G K F+S+   +D  I++A+   + G   +  ++ E     G 
Sbjct: 141 AVKTKAVLDG-GEYVINGAKTFISNGTHADIVIIVARTNDQPGGKGLSLIVAEVNDLPGF 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVS 326
              R+ +K+G R   T EL F +        L      G +  M+ L    L  A+  V+
Sbjct: 200 SRGRVLDKVGQRGQDTRELFFEDMRVPAENLLGGVEGKGFIHLMQQLPQERLALAVTGVT 259

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               ++   + YA+ R   G  ++     K  +A+ A D  AA      L +   E K  
Sbjct: 260 TAEYAVRLTVDYAKEREAFGRPILGFQNTKFVLAECATDTFAARTFVDHLVSQHIEGKLT 319

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E+       A   KYW   +   VI   ++  GG GY+ E  IAR Y ++    I  G+
Sbjct: 320 TEQ-------ASAGKYWATDIQNTVIDRCVQVFGGYGYMLEYPIARMYADARVQKIYGGT 372

Query: 447 GNAMVLDVLNLL 458
              M   +   L
Sbjct: 373 NEIMKDLISRGL 384


>gi|197103854|ref|YP_002129231.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477274|gb|ACG76802.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 380

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 130/377 (34%), Gaps = 26/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P  +RW++         L       GL C      +  +     +          A
Sbjct: 27  RALTPNLDRWEEEGLVDRAFWLA--CGEAGLLCPTVPAEYGGLGLDFRYNAVIDEELSYA 84

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  +   S   A  +    +    + W PK+ S E                 + +TE
Sbjct: 85  GSSA-GITLQSDIVADYLVNYGSEEQKRQWLPKMVSGE-------------AITAIAMTE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+  + +  +K  D         +  +   +D  I++A+ +   G   +  +L +
Sbjct: 131 PGTGSDLQGVRTTARKDGDHYVVNGSKTYITNGQNADLIIVVAKTDPNAGSKGISLILVE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            +  G    R  +KIG  S  T EL F +    L   L     G V  M  L    L  A
Sbjct: 191 ATREGFKRGRNLDKIGQNSADTSELFFEDVRVPLANCLGEEGKGFVYLMSQLPQERLGIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +   +G + +  EA  + + R   G  + +    +  +A +   + A  A         D
Sbjct: 251 VSGQAGAQRAFDEAAKFTKERRAFGQAVFEFQNTRFTMAGLKAKLQAGWA-------HLD 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +R  E       A   K +  ++   V   A++  GG+GY+ E  IAR +R++    
Sbjct: 304 WCIARHLEGKLTAAEASAAKLFHTELQWEVCDAALQLHGGAGYMNEYPIARLWRDARVQR 363

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   V   +
Sbjct: 364 IYGGTSEIMKEVVARTI 380


>gi|239994076|ref|ZP_04714600.1| Acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 599

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 171/489 (34%), Gaps = 62/489 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WD-KVEFHPAWHALLRRSI 111
            +   E ++S    E A+ +      L      G+       D +V     +    +  +
Sbjct: 30  FDEASEDLVSAIFAEAAKFSEN---VLAPINASGDEEGCKWVDGEVTTPKGFKEAYQTYV 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G         F       +     A  +  A          S    + +    +  + 
Sbjct: 87  EGGWPGMSHPEEFGGQALPYSLSSIIAEWFSGANHSWAMYPGLSQGCMATIKAHGSELLQ 146

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K +  K+ S E+  T             + LTE   G+D+  +  + +   DG Y L+G 
Sbjct: 147 KMFLEKLVSGEWTGT-------------MCLTEAHCGSDLGMLKCRAEPQEDGTYSLTGT 193

Query: 232 KWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRL 275
           K F+S+   D       I+LA++         +  F+VP+       E    N +    +
Sbjct: 194 KIFISAGEHDLSENIVHIVLARLPDAPEGTKGISLFVVPKFNVSEDGEKQDRNAVGCGSI 253

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G +++AT  + F    G+L+G  N     +        + + +  ++    +   A
Sbjct: 254 EHKMGIKASATCVINFDGAKGYLIGPPNRGLNCMFTFMNTARIGTGLEGLASSEAAFQGA 313

Query: 336 IHYARRRHVS----GG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R       G          +I  P ++R +           AL+       D  
Sbjct: 314 LRYAKDRIQFRSLTGRKNPDGPADPIIVHPDVRRMLLTQKAFAEGNRALAAYCMQLVDVT 373

Query: 384 KSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              S+EA      A    + PI K +  + A    +  M+  GG G+I+E  + +  R++
Sbjct: 374 LYGSDEAEKQLADAKLAFLTPIVKAFLTETAQEATSYGMQVYGGHGFIKEWGMEQLARDT 433

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
              ++  G+     +D+L     G+N   +L +   Q++    +     LRD+       
Sbjct: 434 RICTMYEGTTGIQAVDLLGRKVMGSN--GELLNVFVQEV----RDYCNSLRDNAQFSAWT 487

Query: 498 KGLARFLTE 506
             L   L E
Sbjct: 488 NALNSHLDE 496


>gi|218889247|ref|YP_002438111.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218769470|emb|CAW25230.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 601

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/488 (17%), Positives = 178/488 (36%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+        L+      G  W  D V+    +    ++ +  G      
Sbjct: 37  DMVNAILEEGAKFCEQVIAPLNRVGDLEGCTWSADGVKTPTGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + +    T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAISEMVGQANWSWGMYPGLSHGAMNTLHAHGTAEQQATYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPQGTKGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V     I YAR R  
Sbjct: 264 ATCVMNFDAATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKPADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADSMLAFLTPIAKAFMTEVGFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L   +L       +     + +   ++  +    +++ ++   +       L
Sbjct: 444 TGVQALDLLGRKVLMTQGEALKGFTKIVHKFCQAN--EANEAVKEFVAPLAQLNKEWGDL 501

Query: 505 TEKIALAS 512
           T K+ +A+
Sbjct: 502 TMKVGMAA 509


>gi|91782260|ref|YP_557466.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91686214|gb|ABE29414.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 377

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 129/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    ++ +    G    I                 A           
Sbjct: 26  PYAADWDREGSLPD--EVVSQLGELGFLGMIVPPELGGSYTDYVAYALAIEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   +      W  K+ S E                   LTE + 
Sbjct: 84  ATLVSVHNSVGCGPVLQYGSEAQKDRWLGKLASGE-------------AIGAFCLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ +   +G + L+G K F  ++  +   I+ A  +   G   +   +    
Sbjct: 131 GSEANNLRTRAELH-NGRWVLNGSKQFVTNAARAGVAIVFAVTDPTAGKRGLSAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G      + K+G R++ T  +   N     + + N+     E +KI L  L+   + +
Sbjct: 190 TPGFNVGPPEKKLGIRASDTCPVALENC---AIPEANLLGSRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A A       YA  R   G  L+    +   +AD+A  + AA  L    A   
Sbjct: 247 AAQALGIARAAFEVARSYAHERVQFGEPLVRHQSVANLLADMATRLNAARFLVHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K    E       A   K +  +MA  V + A++  GG GY+ +  + RHYR++   
Sbjct: 307 TLGKPCLSE-------ASQAKLYASEMAEEVCSHAIQIHGGYGYLNDYPVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|302534520|ref|ZP_07286862.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443415|gb|EFL15231.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 386

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 141/376 (37%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G  +++ EF    + ++R     GL    +   +  +     A  I    L  +    A 
Sbjct: 31  GALYERHEFP---YEIVREMGRMGLFGLPFPEEYGGMGGDYLALGIALEELARVDSSVAI 87

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  + L  T    + W PK+ S E             V    GLTE   G+
Sbjct: 88  TLEAGVSLGAMPLYLFGTEEQKQQWLPKLCSGE-------------VLGAFGLTEPGAGS 134

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDG 265
           D     +   +  D  + ++G K F+++  +D    + +  V GR   G   +  ++   
Sbjct: 135 DAGGTRTTAVRDGDE-WVINGSKCFITNSGTDITGLVTVTAVTGRKADGRPEISSIIVPS 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G       +K+G  S+ T EL F +    L   +     G  + ++IL    +  A 
Sbjct: 194 GTPGFTVAAPYSKVGWNSSDTRELSFDDVRVPLANLVGQEGRGYAQFLRILDEGRIAIAA 253

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++    +  + E++ YA+ R   G  + D   ++  +AD+      A       A+    
Sbjct: 254 LATGLAQGCVDESVKYAKERQAFGKPIGDNQAIQFKLADMETRAHMARIGWRDAASRLVH 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA       I K +   +A     +A +  GG G++ E  +AR +R+S    I
Sbjct: 314 GEPFKKEAA-------IAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDSKILEI 366

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 367 GEGTSEVQRMLIAREL 382


>gi|240274657|gb|EER38173.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
 gi|325090994|gb|EGC44304.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 437

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 134/384 (34%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 76  EQIGPKVREMDEAETMD--PAIVEQLFEQGLMGVEIPEEYGGAGMNFTSAIVGIEELARV 133

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +     T  +   L        + W PK+               T+      L+
Sbjct: 134 DPSVSVMCDVHNTLVNTAVLKFADAEGKRKWLPKL--------------ATNTVGSFCLS 179

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 180 EPVSGSDAFALQTKAVKTPSGYKINGSKMWITNSIEAGFFIVFANLDPSKGYKGITAFMV 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+   
Sbjct: 240 EKGTPGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGEEGQGYKYAINLLNEGR 296

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  +A    +IAAA AL +  
Sbjct: 297 IGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVYNA 356

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 357 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRD 409

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  +L+K
Sbjct: 410 SKIGAIYEGTSNIQLQTIAKMLQK 433


>gi|153001362|ref|YP_001367043.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151365980|gb|ABS08980.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 389

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 150/407 (36%), Gaps = 43/407 (10%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  L    Q+ A  AN   P          + D     P  + L       GL   
Sbjct: 12  LGEDVDMLRDAVQDFA--ANEIAPI-------AAKVDHDNAFP--NELWPVLGGMGLLGV 60

Query: 119 IWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                F    +   AH +    +   +        + S    + +           + PK
Sbjct: 61  TVPEEFGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPK 120

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++    +K  D         W  + 
Sbjct: 121 LVSGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRFILNGNKMWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +    
Sbjct: 168 PDAHTYVIYAKTDLTKGAHGITAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDVEVP 227

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
              + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +
Sbjct: 228 ---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGE 284

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +
Sbjct: 285 FQLVQGKLADMYTGMNAAKSYVYAVAKSCDRGETTRKDAAGA-------ILYSAELATKM 337

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 338 ALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|328770164|gb|EGF80206.1| hypothetical protein BATDEDRAFT_35120 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 424

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 148/375 (39%), Gaps = 24/375 (6%)

Query: 93  RWDKVEFHPAWHALLRRSI-HDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGH 150
           R+ K E  P  H +  + +    +   ++D+    +     +    +     +  +E   
Sbjct: 62  RFAKKEVQPLVHEMDEKEMLDKRVLKGLFDQGLMGIETPTDYGGSESSFMSAILTIEELA 121

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            + PSV+    V       + K +                   T       L+E   G+D
Sbjct: 122 KVDPSVSVICDVQNTLVNTLFKRY-----GTASQKEKYLTGLATDKVGCFCLSEAGSGSD 176

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             A+ +   K +          W  +S  ++ F++ A V+   G   +   + +    G+
Sbjct: 177 AFALQTSAVKKNGKYIINGSKMWITNSYEAEIFLVFANVDPSQGYKGITCFIVEKDM-GV 235

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMR 329
              + + K+G R+++T  L F +         NV     +  K  I  L+   + ++   
Sbjct: 236 KVAKKEIKLGIRASSTCSLSFDDVEVPA---ENVLGEVGKGYKYAIEILNEGRIGIAAQM 292

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + LA+     A+ Y  +R   G  + D   M+  +A +A++I AA  L++  A   +E K
Sbjct: 293 LGLAQGAFDNALPYMYQRKQFGQAIGDFQGMQFQVAQVAMEIEAARLLTYNAARLKEEGK 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S  +EAA A       K +  ++A    ++A+E +GG G+  E  I + YR+    +I  
Sbjct: 353 SFVKEAAMA-------KLYASQVAEKSASKAIEWVGGVGFTREFPIEKFYRDCKIGAIYE 405

Query: 445 GSGNAMVLDVLNLLE 459
           G+ N  +  +  LL+
Sbjct: 406 GTSNIQLQTIAKLLK 420


>gi|119186447|ref|XP_001243830.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 438

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 77  EQIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIVGIEELARV 134

Query: 145 QLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T   + +    +  + K W P++               T+      L+
Sbjct: 135 DPSVSVMVDVHNTLVNTAILKYASAEIKKKWLPRL--------------ATNTVGSFCLS 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   L 
Sbjct: 181 EPVSGSDAFALQTKAVKTESGYKINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLV 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+   
Sbjct: 241 EKDTKGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGR 297

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    DIAAA AL +  
Sbjct: 298 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +    +AA A       K +  ++A  V + A+E +GG G++ E    + +R+
Sbjct: 358 ARKKEAGQDFVMDAAMA-------KLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRD 410

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 411 SKIGAIYEGTSNIQLQTIAKTLQK 434


>gi|73537997|ref|YP_298364.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121334|gb|AAZ63520.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 379

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/370 (21%), Positives = 132/370 (35%), Gaps = 27/370 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK            ++  +GL C      +        H          A +      
Sbjct: 33  EWDKAGVVD--RETWLKAGREGLLCVTLPTEYGGGGGDFGHSAIYNEELARAGVSGLGFG 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S   A  +  +      + W PK+ S EY              + +G+TE   G+D+ 
Sbjct: 91  VHSDIIAPYINRIGNEEQKQRWLPKVCSGEY-------------VLAIGMTEPGTGSDLK 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AI +   +  D  Y ++G K F+S+ + +D  IM+ + +   G   V  ++ +    G  
Sbjct: 138 AIRTTAVRDGDE-YVINGSKTFISNGLNADLIIMVCKTDPAAGARGVSLIVVEADREGFR 196

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R  +K+G  +  T EL F N     G LLG+       +        L  AI + + +
Sbjct: 197 RGRKLDKVGQHAQDTAELFFDNVRVPVGNLLGEEGRGFAYLMGELPQERLSIAISAAAKL 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L   ++Y + R      + D    K  +ADI     A   +           +   E
Sbjct: 257 ETCLEHTLNYVKERKAFNQTVWDFQNTKFKLADIKAQAIAVRLMVDHYLGEHIRRRLTLE 316

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA       I K +  +     + E ++  GG GY+ E  +AR + +S    I  G+  
Sbjct: 317 EAA-------IAKLYATEALGKALDEMVQLHGGYGYMMEYPVARAFADSRVTRIYGGTSE 369

Query: 449 AMVLDVLNLL 458
            M   +   L
Sbjct: 370 VMRDLISRKL 379


>gi|90416685|ref|ZP_01224615.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2207]
 gi|90331438|gb|EAS46674.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2207]
          Length = 603

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/491 (19%), Positives = 175/491 (35%), Gaps = 59/491 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDK-VEFHPA-WHALLRRSIHDGLHCSIWD 121
            ++     E A+        ++  G  G  WD  V   PA +    ++ I  G       
Sbjct: 37  DMVEAIFTEAAKFCENELAPIYQSGDDGCTWDNGVVTTPAGFKEAYQKFIEAGWTSLTGS 96

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIF 179
                     +  I  A   +M        M P ++  ++  L T  T +  KD+  K+ 
Sbjct: 97  TDMGGQGLPSS--IGIAINEMMTTANWAWAMYPGLSEGAVATLETSGTEQQKKDYLVKLI 154

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   GTD+  + ++     DG Y ++G K F+S+  
Sbjct: 155 SGVWSGT-------------MCLTEPHCGTDLGLMKTKAVPNDDGSYKVNGTKIFISAGE 201

Query: 240 SD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++         +  F++P+ L       G  NG+    +++K+G   
Sbjct: 202 HDLTDNIVHIVLAKLPDAPKGTKGLSLFIIPKFLVAEDGSAGERNGVRCGSIEHKMGIHG 261

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           N T  L F +   FL+G+ N     +     +  + +A    +    S   A  YAR R 
Sbjct: 262 NGTAVLNFDDAKAFLIGEPNQGLAAMFTYMNVARIGTASQGAAAAERSYQGAAKYARERL 321

Query: 344 VSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKS 385
               I            +I+ P ++R +    +      A+    +   D        + 
Sbjct: 322 AMRSISGVKNPEGPADAIIEHPDVRRMLLTQRVIAEGGRAMVTYASQFADLYRGGNSQEE 381

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R           PI K +  ++        ++  GG GYI+E  + +  R+S   ++  G
Sbjct: 382 RDAAEIRLGFCTPILKGFITELGVEAANHGVQVFGGHGYIKEWGMEQILRDSRIATLYEG 441

Query: 446 SGNAMVLDVLN---LLEKGTNL---FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           +     LD++    L++K   L     ++ S   Q L          +R       +   
Sbjct: 442 TTGIQALDLVGRKVLMDKFKQLNVFTGEMLSFAGQFLPWKKSPQAKQMRKQAWTVAKLAI 501

Query: 500 LARFLTEKIAL 510
             R+L  ++A+
Sbjct: 502 KWRYLAYRMAM 512


>gi|28900473|ref|NP_800128.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260877426|ref|ZP_05889781.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|260898907|ref|ZP_05907348.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|28808853|dbj|BAC61961.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089196|gb|EFO38891.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308090699|gb|EFO40394.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
          Length = 389

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 135/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P     D     P+   L       GL        +    +   AH +    +   
Sbjct: 29  EHIAPIAADIDHYNQFPSH--LWPLLGEMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPTQREKYLPKLVDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EVNSGSDVVSMQLKAEDKGDHFLLNGTKMWITNGPDADVVVVYAKTDADAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           + S  G    +  +K+G R + T EL F+N        L      VE +        +  
Sbjct: 194 ERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  +AD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAYVYTVATAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQIALDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|229007037|ref|ZP_04164664.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock1-4]
 gi|228754186|gb|EEM03604.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock1-4]
          Length = 381

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 138/382 (36%), Gaps = 33/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   A        G  C + D  +        + +             
Sbjct: 27  PYYNEWEKEGIIP--RAFWTSMGSKGFLCPMVDERYGGAGADFGYSVVINEELEKVGSSL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +           T    K W PK  S E                 + +TE   G
Sbjct: 85  IGIGLHNDIVVPYFTQYGTEEQKKRWVPKCVSGEC-------------ITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLVPRLLEDG 265
           +D+A+I +  +K  D  Y ++G K F+++ + +D  I++ + +  +      +  L+ + 
Sbjct: 132 SDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLLVLER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +   KIG  S  T EL F +       LLG+       + +      L  AI
Sbjct: 191 GMEGFKRGKKLKKIGLHSQDTAELIFEDVKVPASNLLGEEGKGFYYLMEKLQQERLIVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V L    +Y + R   G  + D   ++  +A++  +I              D+
Sbjct: 251 AAKTAAEVMLHITKNYVQERKAFGKSISDFQTVQFRLAEMYTEIEIGRTFV-------DD 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +             + K+W   +A  V AE ++  GG GY+EE  IAR YR+ P ++I
Sbjct: 304 CIANHMNGENIVTKVSMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+   M     N++ KG  L
Sbjct: 364 YAGANEIMK----NIIAKGMGL 381


>gi|222112226|ref|YP_002554490.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731670|gb|ACM34490.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 396

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 141/398 (35%), Gaps = 28/398 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    L R+    G+        +   
Sbjct: 15  GEDIDALRDAVREFAQAE-IAPRAAEIDRNDQFPM--DLWRKFGDLGVLGITVPEQYGGA 71

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +         K + PK+ S E+   
Sbjct: 72  DMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGNEAQRKKYLPKLISGEH--- 128

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 129 ----------VGALAMSEPGAGSDVISMKLRAEDKGGYYLLNGCKMWITNGPDADTLVVY 178

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F N         NV  
Sbjct: 179 AKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGELVFQNVEVPA---ENVLG 235

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+L+  LD     ++G  + + ++     + Y   R   G  + +  +++  +A
Sbjct: 236 GVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A  + ++ +A + D     S+     R        WC + A  +  E ++  G
Sbjct: 296 DMYTVLQAGRSFAYTVAKNLDM--LGSDHVRQVRKDCASVILWCAEKATWMAGEGVQIYG 353

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E  + R +R++    I  G+     + +   L
Sbjct: 354 GNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 391


>gi|206971560|ref|ZP_03232510.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|206733545|gb|EDZ50717.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
          Length = 569

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 153/414 (36%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELADFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + ++ D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVDSDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|262377342|ref|ZP_06070566.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
 gi|262307795|gb|EEY88934.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           lwoffii SH145]
          Length = 607

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 87/457 (19%), Positives = 169/457 (36%), Gaps = 55/457 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F       +  +  + +   A          S
Sbjct: 72  EVKTPKGFKEAYDQFVQGGWQGLSYPEEFGGQNLPMSLNLIKSEMMGTANWSFQMYPGLS 131

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           V   + +    T      + P + +  +  T             + LTE + GTD+  + 
Sbjct: 132 VGCINTIMQYGTDEQKNTYLPHLVAGTWAGT-------------MCLTEPQCGTDLGQVK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           ++ +   DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +  
Sbjct: 179 TKAEPKEDGSYAISGTKIFISAGEHDLTENIVHIVLARLPDAPQGTKGISLFIVPKFIAA 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G R++AT  L F N  G+L+G+ N     +        + 
Sbjct: 239 ADGGIGERNPVNCGSIEHKMGIRASATAVLNFDNATGYLIGEPNKGLHAMFTFMNTARIG 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALDIA 367
           +AI  +    +S   A+ YA+ R     +SG          +I    ++R +        
Sbjct: 299 TAIQGICHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHADVRRMLLTQKAIAE 358

Query: 368 AATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMEC 418
              A+ +  A   D   +A  R + AA+           PI K +  +M        M+ 
Sbjct: 359 GGRAMIYHAAKIADNMNDALLRGDTAAFEQHDDHLGFYTPILKGFLTEMGYEASNHGMQV 418

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQD 475
            GG GYI+E  + +  R+S  +++  G+     LD++    LL     +     + + + 
Sbjct: 419 FGGHGYIKEWGMEQIVRDSRISTLYEGTTGVQALDLIGRKVLLTSKGKVIRDYTAEILKF 478

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
            G   +     +R       +       LT +I LA+
Sbjct: 479 CGQHARN--KYMRRFAWDLTKLCAQWNALTVRIMLAA 513


>gi|54302793|ref|YP_132786.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
 gi|46916217|emb|CAG22986.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9]
          Length = 389

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 131/378 (34%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     DK    P  + L       GL        +    +   AH I    +   
Sbjct: 29  EHIAPIAADIDKDNQFP--NHLWSLFGEMGLLGVTVSEEYGGADMGYLAHVIAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    T      + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTQAQRDKYLPKLIDGTH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +   ++ A+         +   + 
Sbjct: 134 EPNAGSDVISMQLKAELEGDHYVLNGTKMWITNGPDAHTIVVYAKTNPSAKSHGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  NK+G R + T EL F N       +LG +N     +        +  
Sbjct: 194 ERDFEGFSHAQKLNKLGMRGSNTCELVFENCRVPQENILGKVNYGVEILMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKVADMYTRMNAARAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  ++AA           +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGETTRKDAAG-------VILYSAELATQLALDAIQLLGGNGYINEFPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|124003159|ref|ZP_01688009.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
 gi|123991257|gb|EAY30688.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
          Length = 512

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 150/382 (39%), Gaps = 42/382 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--------ARL 140
           P  ++W++    P    + ++    G     +   +        + +          +  
Sbjct: 27  PYIDQWEEERRTP--RDIWKKMGEQGYLGLGYPEEYGGSGLDFFYDVVFNEEIGRLNSGG 84

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           + + Q    ++ SP       +    +  + + + P I S               +   +
Sbjct: 85  FAITQQVTQYMSSP------YILKYGSEELKQKYLPGIISG-------------DLVSCI 125

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVP 259
            ++E   G+D A I ++  +  D  Y ++G K F+++ +  D  I + + +   G   V 
Sbjct: 126 AISEPGAGSDAANIQTRAVREGDH-YIVNGSKTFITNGVYGDFIITVVKTDPEAGSAGVS 184

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ D +  G+   +LK K+G   + T EL F++       L+G        + +   L 
Sbjct: 185 MLVIDRNAEGVTATKLK-KLGWHCSDTAELSFADVKVPASNLIGQEGQGFYYLMNGLQLE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L +   +VS M  ++  ++ Y   R   G  +    V++  IA ++ ++ A  A S+  
Sbjct: 244 RLCAVPAAVSAMENAIEVSLQYMSERQAFGRPINKFQVLRHRIAQMSAEVTALKAFSYYC 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              + +     ++ + A+++         + A  V  + ++  GG G++E+  +AR YR+
Sbjct: 304 CQLYADGVYDVKQCSMAKLL-------VTEKAEEVATKCLQFFGGYGFMEDYPLARMYRD 356

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               +I  GS   M   +  ++
Sbjct: 357 VRVGTIGGGSSEIMREIIAKIV 378


>gi|91975284|ref|YP_567943.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91681740|gb|ABE38042.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 596

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/482 (19%), Positives = 177/482 (36%), Gaps = 64/482 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA-------WHALLRRSIHDGLH 116
            V      E AR++      L      G+R   +            +    ++    G  
Sbjct: 36  DVRDAIINEAARLSEQ---VLQPLNAVGDREGCIRHDDGSVTTPKGFKEAYKQIADGGWL 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F             +     A +        ++ +A+ + +         + P
Sbjct: 93  GLSSPPEFGGQGLPITLTQTVSEFQTSANMAFSMYHGLTMGAAAALLVHGNAEQKALYLP 152

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ + E+  T             + LTE + GTD+  + ++  K +DG Y L+G K F+S
Sbjct: 153 KMTAGEWTGT-------------MNLTEPQCGTDLGLLRTKAVKQADGSYKLTGTKIFIS 199

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +   D       ++LA++EG       V  F+VP+ L +     G+ NG+    +++K+G
Sbjct: 200 AGEHDLADNIIHLVLARIEGAPAGIKGVSLFVVPKFLVNPDGSIGARNGVMCGSIEHKMG 259

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              NAT  + + +  G+L+G+ N     +  M     L  A+  ++   V+   A+ YAR
Sbjct: 260 IHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYAR 319

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDE 382
            R                  +I  P ++RA+  I     AA AL         +A+  D+
Sbjct: 320 ERLQGRALSGPKATDKPADPIIVHPDVRRALLTIRSFNEAARALVMWTALKSDVAHRSDD 379

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           AK R     +  +M P+ K     +  +    A +  GG GYI    + +  R++    I
Sbjct: 380 AKERQTADDHLGLMTPVLKGVLTDVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMI 439

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCK 495
             G+     LD++   L   G       F+ +           + K  +T L  ++   +
Sbjct: 440 YEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGGDDAMKPFVTPLSTALGHLQ 499

Query: 496 ED 497
           + 
Sbjct: 500 QA 501


>gi|39933893|ref|NP_946169.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647740|emb|CAE26260.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 596

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/452 (20%), Positives = 165/452 (36%), Gaps = 53/452 (11%)

Query: 69  TAQELARMANYNTPQLHAYGPGG----ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              E AR++      L+  G            V     +    ++    G         +
Sbjct: 41  IINEAARLSEEVLHPLNGVGDHEGCTRHDDGSVATPKGFKDAYKQIAEGGWMGLSSPTEY 100

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                              A +        ++ +A+ + +  +P   + + PK+ S E+ 
Sbjct: 101 GGQGLPITLTQTVQEFLNSANMAFAMYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWT 160

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + GTD+  + ++  K +DG Y ++G K F+S+   D   
Sbjct: 161 GT-------------MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDMAD 207

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++EG       +  F+VP+ L +     G+ NG+    +++K+G   NAT  
Sbjct: 208 NIIHLVLARIEGAPAGIKGISLFVVPKFLVNPDGTVGARNGVMCGSIEHKMGIHGNATCT 267

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + +    G+L+G+ N     +  M     L  A+  ++   V+   A+ YAR R      
Sbjct: 268 MNYDGATGWLVGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVEYARERLQGRAL 327

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEA 390
                       +I  P ++RA+  +     AA AL    A   D      +AK R    
Sbjct: 328 SGPKATDKPADPIIVHPDIRRALLTMRAFNEAARALVLWTALKSDVAHRSSDAKERQTAD 387

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +  +M P+ K        A    A +  GG GYI    + +  R++    I  G+    
Sbjct: 388 DHLGLMTPVLKGVLTDGGFANAVAAQQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQ 447

Query: 451 VLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG 480
            LD++   L   G       F+ +       G
Sbjct: 448 ALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHG 479


>gi|319902924|ref|YP_004162652.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319417955|gb|ADV45066.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 568

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKREGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDIYKALDDIQRE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +     +EQ+  + E Q L    K++   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATLRDYEQMPCSAEMQPLMDRVKEMANKLDA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE         +AR L E  A+   +  L +  
Sbjct: 489 CTNAVKETANQELLDFVARRLYEMAAVCVMSHLLIQDA 526


>gi|262281092|ref|ZP_06058874.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257323|gb|EEY76059.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 600

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/485 (18%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   A    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQALPNSLGIAISEMVGTANWSWGMYPGLSHGAVRTLEHHGSDEQKDTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I S+ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFHVNADGTIGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKDADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  K    ++   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLKDFTKMVHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|260554164|ref|ZP_05826423.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404706|gb|EEW98217.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 390

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNGQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGVKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|293608452|ref|ZP_06690755.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829025|gb|EFF87387.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 390

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 137/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L       + +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGTKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|229044080|ref|ZP_04191767.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
 gi|228725251|gb|EEL76521.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676]
          Length = 569

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|282864406|ref|ZP_06273462.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE]
 gi|282560893|gb|EFB66439.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE]
          Length = 383

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 139/397 (35%), Gaps = 35/397 (8%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +ELA    A   TP + A+    E  D+        +++R+    G         + 
Sbjct: 10  EAVRELAEDFVAREITPHVVAWDR-AESVDR--------SIVRKLGALGFLGLTIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  VA   +    + W P++ S E  
Sbjct: 61  GSGGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVASWGSEEQKRQWLPRLTSGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D  ++ ++  +  D         +  +   +D  +
Sbjct: 119 -----------ALGCFGLTEPGTGSDAGSLATKAVRDGDDYVINGSKMFITNGTWADVVL 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+     G   V   L      GL  + +  K+G R  AT EL   +       L+G 
Sbjct: 168 LFARTGDTPGHRGVSAFLVPADAPGLTRRTVHGKLGLRGQATAELVLEDVRVPATALMGP 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           +  A   V   + +L  A+ YA  R   G  +    +++  I+D
Sbjct: 228 EGKGFSIAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKSIASYQLVQELISD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           I++D+ AA  L++R+A+  D  +  +         A   K +  + A      A++  GG
Sbjct: 288 ISVDVDAARMLTWRVADLVDRGQDFATA-------ASTAKLFASEAAVRAANNALQVFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 341 YGYIDEYPVGKLVRDARVMTLYEGTSQIQKLIIGRAL 377


>gi|325277814|ref|ZP_08143368.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324097060|gb|EGB95352.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 383

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 139/378 (36%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W    ++R+    GL   +    F            A         
Sbjct: 27  PHAQAWEKA----GWIDDDVVRKMGELGLLGMVVPEDFGGSYTDYVAYALAVEEISAGCG 82

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G +MS   +      L   T    + W P++ + E             V     LTE 
Sbjct: 83  ATGAMMSIHNSVGCGPLLAYGTADQQQQWLPRLATGE-------------VIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ + I DG + ++G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAELI-DGQWVINGAKQFVSNARRAGLAIVFAVTDPDLGKKGLSAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSA 321
               G    R ++K+G R++ T  + F N        L     G    +  L    +  A
Sbjct: 189 ADNPGFKVDRSEHKMGIRASDTCAVTFDNCRVPAANLLGERGKGLAIALSNLEGGRIGIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R +   A+ Y+R R   G  + +   +   +AD+ + + AA  L    A    
Sbjct: 249 AQALGIARAAFEAALGYSRDRVQFGKPINEHQSIANLLADMQVQVNAARLLILHAARLRS 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    E       A   K +  +MA  V + A++  GG GY+E+  + R+YR++    
Sbjct: 309 AGRPCLSE-------ASQAKLFASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQ 361

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  GS     + +   L+
Sbjct: 362 IYEGSSEIQRMLIARELK 379


>gi|227830022|ref|YP_002831801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|227456469|gb|ACP35156.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
          Length = 546

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/496 (21%), Positives = 210/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKHFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFLIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKATTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|332978383|gb|EGK15105.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 597

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/547 (16%), Positives = 186/547 (34%), Gaps = 63/547 (11%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIH 112
            E E +   ++    +  A  A      L+      G  +D  KV     +    ++   
Sbjct: 28  PEYEEVERDIVDSYIEAAASFAENEIAPLNRSGDEEGCTFDNGKVTTPKGFKEAYKQYCE 87

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  F       +       +   A          S  +   +    T     
Sbjct: 88  LGFAALAADEEFGGQGMPFSLSTVVNEIMGSANWSFSMYPGLSHGAIQTLEHHGTEEQKS 147

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+ + E+  T             + LTE   G+D+  I ++ +   DG Y ++G K
Sbjct: 148 IYLEKMVTGEWSGT-------------MCLTEAHAGSDLGIIRTKAEPNDDGSYSITGQK 194

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLK 276
            F+S+   D       I+LA++ G       +  F+VP++  +       PN +    ++
Sbjct: 195 IFISAGEHDMTDNIVHIVLARLPGAPAGTKGISLFIVPKINVNADGSLAEPNQVTCGSIE 254

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G +++AT  + F    GFL+G  N     +     +  + +AI  ++   ++   ++
Sbjct: 255 HKMGIKASATCVMNFDGAKGFLIGPENRGLQCMFTFMNVARIGTAIQGLTASEIAFQGSL 314

Query: 337 HYARRR---------HVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
            YA+ R                  +I  P ++  +           AL++ L+   D   
Sbjct: 315 EYAKDRLAMRSMSGAKAPDKVADPIIVHPAVRNMLLTEKAFAEGGRALAYYLSFFADVVV 374

Query: 382 --EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               + +        ++ PI K +  +         ++  GG G+I E  + ++ R++  
Sbjct: 375 KGTGEEQEYADQMLSLLTPIAKAFLTETGYESANHGVQVYGGHGFIREWGMEQNVRDTRI 434

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISL 493
             +  G+     LD+L     G+    ++ +   + +    K+      +   +R    L
Sbjct: 435 ACLYEGTTEIQSLDLLGRKVLGSQ--GKMLANFTKVINDFCKEHESDESMGEFIRPLAEL 492

Query: 494 CKEDKGLARFL----TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHG 547
             E   L   +    TE      +AA  Y      +   +L  R +        +     
Sbjct: 493 NTEWAELTARIGKQATENPDSVGAAAVDYMYFSGYVTLAYLWARMVAVSKQALANGTTET 552

Query: 548 RFNAAHI 554
            F  A I
Sbjct: 553 GFYEAKI 559


>gi|301061482|ref|ZP_07202246.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444400|gb|EFK08401.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 391

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 137/374 (36%), Gaps = 31/374 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E  P    + ++++  G      D  +  +      +      +       G ++  
Sbjct: 42  DREEKFPM--DIWKKAVELGFTAIFLDEQYGGLGLGLLEQSLVTEEFWRVDPGVGCVL-L 98

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV  + ++    T      + P +   E                G  +TE   G+DI ++
Sbjct: 99  SVFGSEVIQDHGTDAQKSKYLPMVTGGE-------------AIFGCAITEANAGSDIFSV 145

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL--VPRLLEDGSPNGLC 271
            S+  K  DG Y L+G K F+++  ++D  ++                 LL D    G  
Sbjct: 146 RSKAVKK-DGGYVLNGSKMFITNGSIADFLLVFCITNPEAKSRYEKYSFLLLDTKTEGFE 204

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
             +L  K+G R++ T  L FS+        L G        V +      + +    V  
Sbjct: 205 ADKLNGKMGIRASDTASLSFSDVLIPEVNLLGGQEGKGFRQVMECFNFNRIIAGSQGVGV 264

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L  A+ Y + R   G  L     ++  +A++A  + AA AL    A   D      
Sbjct: 265 AQGALDLAVKYMKEREQFGKPLTSFQGLQFKLAEMASRVEAARALVRMGAWMIDNGTLDP 324

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +       +  I K    + A  V  EA++  GG GY++E  + R YR++    I  G+ 
Sbjct: 325 K-------IVSIAKLVAGETAVRVTDEALQLHGGYGYMDEYHVERFYRDAKIVEIYEGAK 377

Query: 448 NAMVLDVLNLLEKG 461
               + V N + + 
Sbjct: 378 EIEKITVANEILRA 391


>gi|332976502|gb|EGK13345.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 606

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 151/429 (35%), Gaps = 53/429 (12%)

Query: 69  TAQELARMA-NYNTPQLHAYGPGG-ERWDKVEFHP-AWHALLRRSIHDGLHCSIWDRSFE 125
             Q +A  A N  +P        G +  D V   P  +     + +  G     +   + 
Sbjct: 42  ILQGIADFAENVISPLYQPADAEGCQFKDGVVTTPKGFKDAYNQFVEGGWQGISYPEEYG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  + +   A          +    + +    T      + PK+    +  
Sbjct: 102 GMNLPMSLNLVKSEMIGTANWPWAMYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTWSG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + ++     DG Y L+G K F+SS   D    
Sbjct: 162 T-------------MCLTEPQAGTDLGQVKTKAVPQEDGTYKLNGTKIFISSGEHDLTDN 208

Query: 242 -AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+   +     G  NG+    +++K+G  S+AT  L
Sbjct: 209 IIHIVLARLPDAPEGTRGISLFIVPKFNVNEEGEAGERNGVSCGSIEHKMGIASSATCVL 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--- 346
            F +  G+L+G+ +     +        + + I  ++   ++   A+ YA+ R       
Sbjct: 269 NFDDATGYLIGEPHRGLKAMFTFMNTARIGTGIQGLAHCELAFQNALPYAKERRSMRTLS 328

Query: 347 ---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAKSRSE 388
                      +I+   ++R +  +        ++ +  A   D           +   +
Sbjct: 329 GVKEPEKVADAIINHADVRRMLLTMKSFAEGGRSMIYHAARYADKMSQGIAEGNDEEFEK 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  ++      E  +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKLGFYTPILKGFLTELGIEAAKEGQQVYGGHGYIKEWGMELIARDARIATLYEGTTG 448

Query: 449 AMVLDVLNL 457
              LD+L  
Sbjct: 449 VQALDLLGR 457


>gi|229144927|ref|ZP_04273324.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228638649|gb|EEK95082.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24]
          Length = 569

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR+S  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDSRISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLETLSKTPGL 455


>gi|15595703|ref|NP_249197.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099492|ref|ZP_01363410.1| hypothetical protein PaerPA_01000504 [Pseudomonas aeruginosa PACS2]
 gi|116054232|ref|YP_788676.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254237269|ref|ZP_04930592.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719]
 gi|254243599|ref|ZP_04936921.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192]
 gi|296387005|ref|ZP_06876504.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           aeruginosa PAb1]
 gi|313111863|ref|ZP_07797655.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946370|gb|AAG03895.1|AE004487_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115589453|gb|ABJ15468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169200|gb|EAZ54711.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719]
 gi|126196977|gb|EAZ61040.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192]
 gi|310884157|gb|EFQ42751.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 601

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/488 (17%), Positives = 178/488 (36%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+        L+      G  W  D V+    +    ++ +  G      
Sbjct: 37  DMVNAILEEGAKFCEQVIAPLNRVGDLEGCTWSADGVKTPTGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + +    T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAISEMVGQANWSWGMYPGLSHGAMNTLHAHGTAEQQATYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPQGTKGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V     I YAR R  
Sbjct: 264 ATCVMNFDAATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKPADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADSMLAFLTPIAKAFMTEVGFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L   +L       +     + +   ++  +    +++ ++   +       L
Sbjct: 444 TGVQALDLLGRKVLMTQGEALKGFTKIVHKFCQAN--EANEAVKEFVAPLAQLNKEWGDL 501

Query: 505 TEKIALAS 512
           T K+ +A+
Sbjct: 502 TMKVGMAA 509


>gi|332261785|ref|XP_003279947.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 621

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/483 (17%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQANGLKGIVLAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 190 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPV---ENILGEVGDGFKVAMNILNSGRF 305

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++ 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    +   LRDS+    +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTIGRRLRDSLGRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 481 LGLTGNRGVVHPSLADSANKFEENTYYFGKTVETLLLRFGKTIMEEQLVLKRLANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|329939155|ref|ZP_08288529.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302040|gb|EGG45933.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 383

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 140/395 (35%), Gaps = 35/395 (8%)

Query: 70  AQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            + LAR   A    P + A+    E  D+         ++++    G      D  +   
Sbjct: 12  VRRLARDFVAGEIAPHVVAWDR-AEEVDR--------GIVKKLGEVGFLGLTLDEEYGGS 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                  ++S S+   A  +A   +    + W P + + EY   
Sbjct: 63  GGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTIAAWGSEEQKRHWLPGLVAGEY--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D   +T++  +            +  +   +D  ++ 
Sbjct: 120 ----------VGSFGLTEPGTGSDAGNLTTRAVREGGDHVLNGTKTFITNGTWADVILLF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+     G   V   L      GL  + +  K+G R  AT EL   +        L    
Sbjct: 170 ARSTDAPGHKGVTAFLVPADSPGLTRRTIHGKLGLRGQATAELVLQDVRVPASAMLGPEG 229

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  I+DIA
Sbjct: 230 KGFSVAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +D+ AA  L++R+A+  D     + EA+ A       K +  + A      A++  GG G
Sbjct: 290 VDVDAARLLTWRVADLVDRGLPFATEASKA-------KLFASEAAVRSANNALQVFGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI+E  + +  R++   ++  G+     L +   L
Sbjct: 343 YIDEYPVGKLLRDARVMTLYEGTSQIQKLLIGRAL 377


>gi|332843535|ref|XP_001143270.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 7
           [Pan troglodytes]
          Length = 396

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 122/360 (33%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               ++  + G+        +         H +    +   +        + S    + +
Sbjct: 51  QEFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQL 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + + PK+ S EY                L ++E   G+D+ ++  + +K  
Sbjct: 111 VRNGNEAQKEKYLPKLISGEY-------------IGALAMSEPNAGSDVVSMKLKAEKKG 157

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +         W  + P +D  I+ A+ +         +   + +    G    +  +K+G
Sbjct: 158 NHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLG 217

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R + T EL F +       +LG  N     +     L  L  A   +  M+  L   I 
Sbjct: 218 MRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIP 277

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +M+  +AD+   + A     + +A + DE    +++        
Sbjct: 278 YLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKD-------C 330

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  + A  V  + ++C GG+GYI +  + R  R++    I  G+     L +   
Sbjct: 331 AGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 390


>gi|226361798|ref|YP_002779576.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240283|dbj|BAH50631.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 147/408 (36%), Gaps = 47/408 (11%)

Query: 63  EYVLSCTAQELARMAN-----YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           +  L+   +E  ++A         P    +   GE  D             +    G   
Sbjct: 2   DLTLTEEQKEFRQLARDFLNKEVVPHRAEWDR-GESVDTAIVP--------KLADIGFFG 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAP 176
                 +  +                A      ++S S+     ++    T     +W P
Sbjct: 53  MTIPEEYGGLGGDYITYCLGMEELGRADSAVRGIVSVSMGLVGKVILSHGTEEQKHEWLP 112

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +I S E                  GLTE   G+D   + ++  +  D  Y ++G K F++
Sbjct: 113 RIASGE-------------ALACFGLTEPDNGSDPGNLKTKAVRSGDE-YVINGSKIFIT 158

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +   ++ A+  G  G   V   L      G   + +  K+G R  AT EL F++  
Sbjct: 159 NGTWAKLCLVFART-GGPGPKGVSAFLVPTDTPGFESREIHGKLGLRGQATAELSFTDVR 217

Query: 296 GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGIL 349
                   +     +   I ++ LD   +SV    V      L  A+ YAR R      L
Sbjct: 218 VPASC---LLGSEGQGFSIAMHSLDKGRVSVGAGCVGIIQGCLEAAVDYARERTQFDRPL 274

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++  IAD+++D  A   L++R A+  +  +     A+ A       KY+C + A 
Sbjct: 275 ASFQLVQDLIADMSVDTDAGRLLTWRAADLIERGEPFGTAASKA-------KYFCSEAAV 327

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                A++  GG GY++E  +A++ R++   ++  G+     L +   
Sbjct: 328 RAANNAIQLFGGYGYVDEYPVAKYMRDARVMTLYEGTSQIQKLLIGRA 375


>gi|194741824|ref|XP_001953387.1| GF17739 [Drosophila ananassae]
 gi|190626446|gb|EDV41970.1| GF17739 [Drosophila ananassae]
          Length = 418

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 151/436 (34%), Gaps = 44/436 (10%)

Query: 43  LVALIANFP---SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA---------YGPG 90
           L+ ++ +     +     L  +G      +   LA ++  +   L             P 
Sbjct: 4   LIKVVRSLGQCSASGAWNLNRIGGVGGQRSIACLASLSETHQ-ILQRTCREFANAELAPK 62

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
               D+ E  PA    +RR    GL        +                          
Sbjct: 63  ARHHDREELFPA--EQVRRLGELGLLSVAVREEYGGSGLDYQAYAIGMEEVARGDAAVAI 120

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +M  +      V    +    +D+               P  + +      L+E   G+D
Sbjct: 121 VMGVNNLFLGAVQQHGSEEQKRDFLI-------------PYTQGANIAFYALSEPGNGSD 167

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             A ++  +   D         W  +S  +   ++ A V+  +    +   L +    GL
Sbjct: 168 AGAASTTAKLEGDSYLLNGTKAWISNSKEASGGLVFATVDKSLKHKGITAFLTEKDVPGL 227

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMR 329
              + ++K+G R+ +T +L   +          V   P +  KI +  LD   + ++   
Sbjct: 228 SIAKKESKMGMRATSTCQLVLEDVQVPRS---RVLGNPGDGFKIAMQSLDCGRIGIAAQA 284

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             +A+     A+ Y+++R   G  L    ++++ +AD+A  + A+  L++R A   D   
Sbjct: 285 TGIAQAALELAVDYSQKRIAFGKQLARMQLIQQKLADMASRVEASRLLTWRAAWLKDNGL 344

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAA A++ A     +C         + ++ +GG GY  +     +YR S    I  
Sbjct: 345 PFTKEAAMAKLHASEAATYCS-------HQCIQVLGGMGYTTDLPAELYYRNSRVTEIYE 397

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + + N + +
Sbjct: 398 GTSEIQRIVIANAVLR 413


>gi|126175033|ref|YP_001051182.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125998238|gb|ABN62313.1| isovaleryl-CoA dehydrogenase [Shewanella baltica OS155]
          Length = 389

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 150/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +    H   P   + D     P  + L       GL     
Sbjct: 12  LGEDV------DMLRDAVQDFAT-HEIAPIAAKVDHDNAFP--NELWPVLGSMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  AEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRFILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 AHTYVIYAKTDLTKGAHGITAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKSYVYAVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|311693509|gb|ADP96382.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 393

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 72/370 (19%), Positives = 133/370 (35%), Gaps = 33/370 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +H  W         L +++   G  C      F  V     +          A L     
Sbjct: 43  YHDQWEKDGQVSRELWQKAGELGFLCPCLPEEFGGVGADFRYSAVLIEEVARAGLTGIGW 102

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  V    +  +   + PK+ S E                 + +TE   G+D+
Sbjct: 103 GLHSDIVAPYVLNYGSDELKNHYLPKLASGEM-------------IGAIAMTEPGAGSDL 149

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + +   K  D  Y L+G K F+++   +D  I++A+ + + G   +   + + +  G 
Sbjct: 150 QGVKTTAVKNGDH-YVLNGSKTFITNGQLADVVIVVAKTDPKEGAKGISLFMVETAWEGF 208

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVS 326
              +  NK+G ++  T EL F +               G  + M+ L    L  A+ +V+
Sbjct: 209 EKGQNLNKVGMKAQDTSELFFQDVKVPEKNLIGPGEGQGFFQLMQELAAERLQVALGAVA 268

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +    + Y + R+  G  +I     +  +A++  +I AA   + R      + K  
Sbjct: 269 AAEAAWQWTLDYVKERNAFGKPVIAFQNTRFKMAEMKAEITAARVFTDRCLELHLDKKLD 328

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              AA  + +          +   V+ E ++  GG GY+ E  IAR + +S    I  G+
Sbjct: 329 IPTAAMLKQLT-------TDLQCKVMDECVQLHGGYGYMWEYPIARAWADSRVQRIYAGT 381

Query: 447 GNAMVLDVLN 456
              M   V  
Sbjct: 382 NEIMKEIVAR 391


>gi|262377284|ref|ZP_06070508.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262307737|gb|EEY88876.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 390

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 131/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+     +      + + +        A   A      S   A+ + 
Sbjct: 52  RELWNKAGELGLLCATMPEEYGGSGVDRLYSMILIEEQAYAGDSATGFSLHSDIVANYLL 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W PK+ S E             V   + +TE   G+D+ A+ +      D
Sbjct: 112 NFGNKAQKQQWLPKMASGE-------------VVTAIAMTEPGTGSDLQAVRTSAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +      G   +  ++ +    G    +  NKIG 
Sbjct: 159 D-YVINGSKIFITNGYLCDMAIVVCKTGNNDKGSANLSLIMVEAERAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F N        L +   G +  MK L    L  AI+  +G   + A  + Y
Sbjct: 218 KGQDTCELFFDNVRVPTENLLGLEGMGFMMLMKELAWERLIVAIICQAGAEAAFAHTVKY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I        R        +   + AA A     
Sbjct: 278 TKERQAFGKSISHFQNTRFKLAELRTEIDVCRTYLDRCMQLQLNHELGVDAAAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY   +M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 333 --KYKISEMYSKVVDECLQLHGGYGYMLEYPIARAYIDNRANRIYAGTNEIMKELIARSL 390


>gi|93006279|ref|YP_580716.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393957|gb|ABE75232.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 594

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/489 (16%), Positives = 172/489 (35%), Gaps = 62/489 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALLR 108
           + L  +    +    +E+A++       L      G+        D V   P  +    +
Sbjct: 29  ENLAHVDMETVDMILEEMAKLTKN---VLLPINRSGDEEGATFQGDGVVTTPTGFKEAYK 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +    G      +  +      +   +    +   A        + +V +   +    + 
Sbjct: 86  QYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFTANQSFALYPNLTVGATLCLNAAASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +  K+++ E+  T             + LTE   GTD+  I ++     DG Y +
Sbjct: 146 EQKQTYLEKMYNGEWAGT-------------MCLTEPHAGTDLGIIKTKAIPNDDGSYDI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA+          +  F+VP+ L +     G  N L  
Sbjct: 193 SGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNEDGSLGERNTLAV 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F +  G+++G  N     +  M     +   +  + G  ++ 
Sbjct: 253 GSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTMGLQGLGGSELAY 312

Query: 333 AEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             A  YA  R   G               +I    ++R + +   +  A+   +  +A +
Sbjct: 313 QNAALYANDRGQ-GRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEASRCFAMYVAKN 371

Query: 380 FDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            DE K  ++  A          + P+ K +    A     +  +  GG GYI E  + + 
Sbjct: 372 LDEEKFSTDPEAAQAAAARVALLTPVAKAFLTDKALEATIDCQQVFGGHGYIREWGMEQI 431

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++    I  G+     LD+L   + +            + +D  ++ +    I + ++
Sbjct: 432 VRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEI-RDFVNNMQAEHGIKQATL 490

Query: 492 SLCKEDKGL 500
                 + L
Sbjct: 491 DAADTIEAL 499


>gi|148652719|ref|YP_001279812.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571803|gb|ABQ93862.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 597

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/477 (18%), Positives = 173/477 (36%), Gaps = 72/477 (15%)

Query: 70  AQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            +  A  A      L+      G +++  +V     +    ++    G      +  F  
Sbjct: 42  IEAAASFAENEIAPLNRSGDEEGCQFNNGEVTTPKGFKEAYKQYCELGFAALAAEEEFGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184
                   +      +M        M P ++  ++  L    T      +  K+ + E+ 
Sbjct: 102 QGMP--FSLGTVVNEIMGSANWSFSMYPGLSHGAIATLEHHGTDEQKAIYLEKMVTGEWS 159

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE   G+D+  I ++ +   DG Y ++G K F+S+   D   
Sbjct: 160 GT-------------MCLTEAHAGSDLGIIRTKAEPKGDGTYAITGQKIFISAGEHDMTD 206

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVE 288
               I+LA++ G       +  F+VP++  +        N +    +++K+G +++AT  
Sbjct: 207 NIIHIVLARLPGAPEGTKGISLFIVPKVNVNADGSLAERNQVTCGSIEHKMGIKASATCV 266

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG- 347
           + F    G+L+G  N     +     +  + +A+  ++   V+   ++ YA+ R      
Sbjct: 267 MNFDGATGYLIGPENRGLNCMFTFMNVARIGTAVQGLTASEVAFQGSLEYAKERLAMRSL 326

Query: 348 -----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARI 395
                       +I  P ++  +           AL + LA   D  AK   EE  YA  
Sbjct: 327 SGAKAPEKVADPIIVHPAVRNMLLTEKAFAEGGRALVYYLAMFADTVAKGTGEEQQYADQ 386

Query: 396 M----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           M     PI K +  +         ++  GG G+I E  + ++ R++    +  G+     
Sbjct: 387 MLSLLTPIAKAFLTETGYEAANHGVQVYGGHGFIREWGMEQNVRDTRIACLYEGTTEIQS 446

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE---DKGLARFLT 505
           LD+L                  + LGS GK +    +     C+E   ++ +A F+ 
Sbjct: 447 LDLLG----------------RKVLGSQGKMLANFTKVIHKFCQEHQDNEAMAEFIA 487


>gi|313760586|ref|NP_001186490.1| isovaleryl-CoA dehydrogenase, mitochondrial [Gallus gallus]
          Length = 422

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 130/379 (34%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P  ++ D+           ++    G+        +         H +    +   
Sbjct: 58  EHLAPKAQQIDQENEFKGMREFWKKLGELGVLGITAPVEYGGSALGYLDHVLVMEEVSRA 117

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +    + + PK+ S E+                L ++
Sbjct: 118 SAAVGLSYGAHSNLCINQLVRNGSEAQKEKYLPKLISGEH-------------IGALAMS 164

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  +  K  D         W  + P +D  I+ A+ +         +   
Sbjct: 165 EPNAGSDVVSMKLKADKKGDYYVLNGNKFWITNGPDADVLIVYAKTDLNAVPASQGITAF 224

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + +    G    +  +K+G R + T EL F +        L   +  V  +   + L+  
Sbjct: 225 IVEKGMPGFSTAQKLDKLGMRGSNTCELIFEDCKIPAENILGKLSKGVYVLMSGLDLERL 284

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S   +  M+  L  AI Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 285 VLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMYTRLMACRQYVYNVAK 344

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D+    +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 345 ACDQGHFNAKD-------CAGVILFSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAK 397

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 398 LYEIGAGTSEVRRLVIGRA 416


>gi|289581512|ref|YP_003479978.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289531065|gb|ADD05416.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 625

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 123/574 (21%), Positives = 213/574 (37%), Gaps = 85/574 (14%)

Query: 34  MNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           +N +  D  L   +               L   GE V   T  + A   + ++P+L  Y 
Sbjct: 18  VNYWELDQTLQRELRRGYTDDEFDWAESRLSAFGETVG-HTIADNADDIDNHSPELEPYD 76

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE  + V +  A +   R +   G+    ++                A  YL++  + 
Sbjct: 77  KYGEVQNWVRYPEAQYENERLTYEQGIVADSFEAP-PGRDEPMPLSHNLAMQYLLSYADP 135

Query: 149 GHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G     ++T+ + + L        V  ++   + SR+Y+   +  M          LTEK
Sbjct: 136 GFDCPVAMTAGAALVLEKFGREDDVLCEYYDALTSRDYEDLIEGAMF---------LTEK 186

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLE 263
           +GG+D+ A  ++ +     G + LSG KWF S+  ++  + LA+ E    G   +   L 
Sbjct: 187 QGGSDVGANETRAEWDESAGYWRLSGEKWFCSNIDAEGTLALARTENAPAGTAGLSMFLV 246

Query: 264 D-GSPNGLC---------------------------------YQRLKNKIGNRSNATVEL 289
               P+G+                                  Y+RLK+K+G  S  T E+
Sbjct: 247 PHADPDGVSRDDSDDADGNGPYTKGQRREDGPLAPAETNDQFYRRLKDKLGTISVPTGEV 306

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           EF+    +L+G+       + +M  L  L +A  S   +   L E+  YA  R   G  +
Sbjct: 307 EFTGAKAYLVGEEEAGFRQMAEMLNLERLSNAAASCGIIGRVLLESKIYAANREAFGETI 366

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPITKY 402
              P+M+  + D+A+   AAT  +F  A             ++  +     R++ PI K 
Sbjct: 367 DQYPLMRADLVDMAVTHEAATTYTFEAARLLSKRERAERAGETADDAYRLMRLLIPIAKA 426

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              +MA    +  ME  GG+GY+ E    R  R++    I  G+ N + LDVL  LE+  
Sbjct: 427 RTARMAVDTASYGMEIHGGNGYVNEFVTNRLLRDAQVLPIWEGTENILSLDVLRALERE- 485

Query: 463 NLFEQLFSTLEQ--------DLGSSGKKVITILRDSISLCKEDKGL--------ARFLTE 506
              E L + + +         L  +   V +   D +       G         A+ L  
Sbjct: 486 EAHEPLQAAISERLEYVSHPALADAAATVESEFHDLLGALATLAGEDTEYAQLSAKRLAH 545

Query: 507 KIALASSAAALYRAGMNDIAD------VFLENRF 534
            +    +AA L      D+ +        +  RF
Sbjct: 546 YVFDVFTAALLLERAQRDLDEDENGRLALVATRF 579


>gi|115523097|ref|YP_780008.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115517044|gb|ABJ05028.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 593

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/508 (20%), Positives = 189/508 (37%), Gaps = 69/508 (13%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-----RWD-KVEFHPAWHALLRRSIHD 113
             G+Y    TA  L     + T  L      G+       D KV   P W    +R I  
Sbjct: 28  HFGDYDSEITAAVLEEAGRFATDVLAPLNRVGDTEGIKLIDGKVLTAPGWPDAYQRWIAA 87

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
           G +      +F       A  I AA   + A       + P +T +++ AL    +  + 
Sbjct: 88  GWNAVSGAEAFGGQGLPMA--INAACTEIWAAANVAFGLCPLLTLSAIEALDAHGSEELK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K +  K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G 
Sbjct: 146 KIYLEKLISGEWPGT-------------MQLTEPQAGSDVGALRARAERADDGSYRIFGT 192

Query: 232 KWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    D        +LA++         +  FL+P+ L +     G+ N +    +
Sbjct: 193 KIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFLVNADGSLGARNDIFPSGI 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G  +  T  +   +     G+L+G+ N     +  M     L   +  V     + 
Sbjct: 253 EHKLGMHAAPTCTMTMGDNAGAIGYLIGEENRGMQCMFTMMNQARLSVGLEGVGIAERAY 312

Query: 333 AEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            +A+ +A+ R               +I  P +KR +  +    AAA  + +  A + D  
Sbjct: 313 QQALAFAQERKQGRAIGEKPAKSDPIIVHPDVKRMLLQMRSMTAAARTICYATAVALDIS 372

Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               +   ++  A  A ++ PI K +   +   V    ++  GG G+IEE   A+H R++
Sbjct: 373 LRASDPAVKAAAATRAALLTPIAKAFATDIGNEVAYLGVQIHGGMGFIEETGAAQHLRDA 432

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL-------EQDLGSSGKKVITILR 488
               I  G+       L    L   G      L S L       E             LR
Sbjct: 433 RITPIYEGTNGIQAIDLVTRKLAPNGGEAVWALLSELSAIVDDVEASNDPGFGTAPAKLR 492

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAA 516
           + +   +     +++L E++  A + A 
Sbjct: 493 EGLGALERA---SKWLLERMTAAPNEAL 517


>gi|257388948|ref|YP_003178721.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257171255|gb|ACV49014.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 389

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 135/384 (35%), Gaps = 36/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    L+ +    GL        +            A           
Sbjct: 26  PRAAEIDETDEFP--QDLVDQMADLGLMGMPIPEEYGGAGLDYHAYAMALEEIARGSGGL 83

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +++  ++ A  M+         + +               P+ +        L+E   
Sbjct: 84  GTVVAAHISLACNMIYEFGDEAQKEAYL-------------TPLAEGEEIGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKIS---------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G+D+ A+ +  + +          D      G  W  +  ++D  ++ A+ +   G   +
Sbjct: 131 GSDVPAMETTAKPVGGDPHEGEEPDEYVVDGGKLWISNGSVADTVVLFAKTDPEAGNKGI 190

Query: 259 PRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--I 314
              +      +G   +  ++K+G++   T EL F +        L     G V  +K   
Sbjct: 191 SSFVVRPEEDDGFHVEGTEHKLGDKGCPTAELRFDDMHLPADRRLGEAGRGFVHALKTLN 250

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A   V   + +L EA+ YA  R      + D   ++  +AD+     AA  L  
Sbjct: 251 GGRITIAARGVGIAQAALDEALDYAGEREQFDQPIGDFQAIQHKLADMDTKTEAARMLMH 310

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A+     ++  +EAA A       K +  +++  V  E ++  GG GY ++  + R Y
Sbjct: 311 KAADKKIRGENFVKEAAQA-------KLYASEVSREVANEGIQIHGGYGYTKDFPVERFY 363

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++  N I  G+   +   + + L
Sbjct: 364 RDAKLNEIYEGTSEVLRNTIADQL 387


>gi|323476950|gb|ADX82188.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 546

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 106/496 (21%), Positives = 211/496 (42%), Gaps = 37/496 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K + P +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVPYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +++G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFFIRRLKRKSGTNSVPTGEVEFNSSEAYIIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRD-SISLCKE 496
           I  G+GN   L++L  + K      QL   LE    +       K +  ++D + +L   
Sbjct: 416 IWEGTGNIQALEMLEAMVK-KEAHRQLIRDLEGIVNEAKDEIASKTLDFIKDKTTTLLTY 474

Query: 497 DKGLARFLTEKIALAS 512
            +   +F ++ + L  
Sbjct: 475 REYEMQFYSKDLLLTL 490


>gi|197105143|ref|YP_002130520.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478563|gb|ACG78091.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 379

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+ +  P    ++R++   G                +              +  
Sbjct: 26  PHSARWDEEKHLPV--DVMRKAAELGFAGLYVRDDVGGSALSRLDASIVFEQLSYGDVAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    ++ M+    +  + + + P++ + E             +     LTE   G
Sbjct: 84  AAFISIHNMASWMIDRFGSEELRRRFLPRLTTME-------------LIASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +    G Y L+G K F+S    SD ++++A+  G  G   V   + +   
Sbjct: 131 SDAASLQTSARSDG-GEYVLNGSKAFISGAGTSDVYVVMARTGGE-GAGGVSTFVVEKDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G  +  T  + F N        +GD                ++ A  S
Sbjct: 189 PGLSFGAQERKMGWNAQPTALVHFDNCRVPEANRVGDEGQGFKIAMAGLDGGRINIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G  ++   A  +   R   G  L +   ++  +AD+A ++ AA  +  R A++ D   
Sbjct: 249 LGGAALAFDTAKAHLETRRQFGRALREFQGLQWRLADMATELEAARLMVRRAAHALDNKD 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +      A     + K +       V  +A++  GG GY+ +  + R  R+   + IL 
Sbjct: 309 PK------ATQYCAMAKRFATDAGFEVANQALQLHGGYGYLRDYPLERIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M +     L +
Sbjct: 363 GANEVMRVITARELFR 378


>gi|194293008|ref|YP_002008915.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193226912|emb|CAQ72863.1| Putative acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 385

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 67/357 (18%), Positives = 132/357 (36%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    + +                +   +V   S  + +  T   
Sbjct: 46  EMGLFGISIPENYGGIGLSMSQECDVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P+I S E               I   LTE   G+D A++ ++ +   D       
Sbjct: 106 KQQYLPRIASGEM-------------IISFALTEPNAGSDAASLQTKAELDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGPGAGGISSFIVPADTPGISLGKPDKKMGQRGTKTCDVV 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YA+ R 
Sbjct: 212 LENVRVPAANIIGGVPGVGFKTAMKV---LDRGRLHLSALACGMAHRLITDAVAYAKERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   +      ++A  TK +
Sbjct: 269 QFGRPIGDFQLIQAMLADSQAELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E    R YR+     +  G+     + +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQMIIAKHLLR 384


>gi|323694452|ref|ZP_08108623.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323501533|gb|EGB17424.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 379

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 134/364 (36%), Gaps = 26/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMV 162
             L R+   +          +                   A + A  ++ SP+      +
Sbjct: 37  KELYRKMAQNQYFGVTIPEEYGGCGAGYVAMAIVMEELARASVSATLYVTSPNTLLGLPI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ K        LTE   G+D A   +  +K  
Sbjct: 97  LNYGTEEQKEKYL-------------VPVMKGEKEGTFALTEPSAGSDAATQNTIARKDG 143

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++ P+ D  ++ A  +  +G   +   + +    G    + + K+G 
Sbjct: 144 D-YYIINGRKAFITAAPLCDFAVVFAATDVLLGARGITAFIIERDTPGYSVGQPERKMGV 202

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
             + T ++   N        L          MK L    L  A   +     ++ EA+ Y
Sbjct: 203 NGSPTADIILENVKVHKSQILGEEGKAFQMAMKTLDSGRLVVAAQCLGIAEAAMKEAVGY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R+R   G  L +   ++  +AD+   +  A AL +  A   D   + ++EAA A     
Sbjct: 263 VRQRRQFGAALSEFQGIQFMLADMETKLCCARALIYDAAEKKDAGMNITKEAAAA----- 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+  +M   + A+A++  G  GY+++  I R +R++   +I  G+   +   +   +
Sbjct: 318 --KYFASEMCNEIAAKALQLHGAYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQV 375

Query: 459 EKGT 462
            KG 
Sbjct: 376 LKGR 379


>gi|169333730|ref|ZP_02860923.1| hypothetical protein ANASTE_00114 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259579|gb|EDS73545.1| hypothetical protein ANASTE_00114 [Anaerofustis stercorihominis DSM
           17244]
          Length = 406

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 127/377 (33%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+ E  P      +R    G+    + + +         +      L       
Sbjct: 52  PLAAEVDEQERFPE--ENRKRLAELGMMGICYPKEYAGAGHSYLTYIAVIEELAKHCSTT 109

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L       A  ++   T    + +               P+ K        +TE   
Sbjct: 110 SVMLSDHHSLGAFPISEFGTEEQKQKYL-------------VPLLKGEKLGAFAVTEPSA 156

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D++   +    + D  + L+G K F+++   +D + + A  +       +   + +  
Sbjct: 157 GSDLSNQQTTAVDMGDH-WLLNGSKIFITNGFYADTYFVTAMTDKSKRSKGISGFIVEKG 215

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G  +   + K+G R +AT EL F +        L       +    L+ LD   + V+
Sbjct: 216 TPGFTFGTKEKKMGIRGSATYELVFQDCKIPKENLLGELGKGFK--MALMTLDGGRIGVA 273

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A++       Y          +      +  +AD+   + AA  L +R A +  
Sbjct: 274 AQALGIAQSAIDHCKKYVTEHMQGEQRISQYQFTQFELADMQARVDAARLLVYRAAQAKQ 333

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + ++ S        +A + K +  + A  V    ++ +G  GY  +    R  R++    
Sbjct: 334 DHEAFS-------HLAAMGKLYAAEAATNVTRRCIQLVGYDGYSRDYPFERLMRDAKITE 386

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + + + +
Sbjct: 387 IYEGTSEVQRMVISSWM 403


>gi|239945375|ref|ZP_04697312.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991829|ref|ZP_04712493.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
          Length = 384

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 141/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LR++   GL               ++  +         
Sbjct: 25  EHLAPHAVAWDQDKHFPV--DVLRKAAGLGLGGVYVREDPGGSGLSRSDGVLVFEALATG 82

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       M+    T      + P + + E                   LTE
Sbjct: 83  CPSIAGYLSIHNMVGWMIDRYGTEDQRARYLPDLCTMEQ-------------LGSYCLTE 129

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D  Y L+G K F+S   +   +I+LA+  G  G   +   + 
Sbjct: 130 PGAGSDAAALRTRAVRDGDH-YVLTGTKQFISGAGASHLYIVLART-GEDGPRGISAFVV 187

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +   + K+G  +  T ++           LLG+         +      L  
Sbjct: 188 ERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGRLGI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G + +L  ++ +   R   GG L+D   ++  +AD+A ++AAA AL  + A + 
Sbjct: 248 AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALVRQAAEAL 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D         A A  +  + K++      +V   A++  GG GY+ E  I +  R+   +
Sbjct: 308 DR------NTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKIVRDLRVH 361

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   L
Sbjct: 362 QILEGTNEIMRVMVARSL 379


>gi|17534899|ref|NP_495142.1| Acyl CoA DeHydrogenase family member (acdh-8) [Caenorhabditis
           elegans]
 gi|868175|gb|AAA68712.1| Hypothetical protein K05F1.3 [Caenorhabditis elegans]
          Length = 412

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 122/379 (32%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++DK    P    +++++   G   +I    +                        
Sbjct: 46  PNAAKFDKSGEFP--WEIVKQAHSLGFMNTIIPEKYGGPGLSNLDTALIVEALSYGCSGL 103

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     +A+ + L  T    K +                +    +     +TE   G
Sbjct: 104 QIAIFGPSLAAAPICLSGTEEQKKKYL-------------GMLAAEPIIASYCVTEPGAG 150

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++  K  D         W      +  F +LA+ +              + DG
Sbjct: 151 SDVNGVKTKAVKQGDEYIINGSKAWITGGGHAKWFFVLARTDDNPKTPAGKAFTAFIVDG 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G+   + +N +G R + T  + F +         N+   P    K+ +         
Sbjct: 211 DTPGITRGKKENNMGQRCSDTRSITFEDVRVP---KENILGAPGAGFKVAMGAFDLTRPQ 267

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V      L E+  YA  RH  G  + +   ++  IAD+A+++  +   ++R A  
Sbjct: 268 VAASAVGLAWRCLDESTKYAMERHAFGTPIANHQGVQFMIADMAINLELSRLFTYRAAAE 327

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A      A +  GG+G+  E  + +  R++  
Sbjct: 328 VDSYGVSS-------YNASIAKCFAADTANVAATNACQIFGGAGFNCEYPVEKLMRDAKI 380

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 381 YQIYEGTSQIQRMVIGRTL 399


>gi|325121814|gb|ADY81337.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 390

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 137/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  ++ D+    PA   L ++    GL        +    +   AH I    +   +   
Sbjct: 31  PIAQQVDQDNKFPAH--LWKKFGDMGLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRNGNEQQKQKYLPKLISGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L       + +   +  + A++S   
Sbjct: 196 KGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGTKVLMSGLDYERAVLSAGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   I Y  +R   G  L +  +M+  +AD+     A  AL + +  + D+A 
Sbjct: 256 LGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKAD 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A     +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 HDRS----LRKDAASAILYAAEKATWMAGEAIQSLGGNGYINEFPAGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETK 390


>gi|83746441|ref|ZP_00943493.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|207742112|ref|YP_002258504.1| acyl coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726982|gb|EAP74108.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|206593499|emb|CAQ60426.1| acyl coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 376

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 133/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + R+    G +      +                         
Sbjct: 24  PHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEALGGAGLDYLSLALILEEIAAGDGGT 81

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +    SM+         + W               P+ +  +     LTE   
Sbjct: 82  STVVSVNNCPVCSMLMAYANDAQKQQWL-------------VPLARGEMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA+ +   +  D        ++  S   +D  I++A  +   G   +   L   S 
Sbjct: 129 GSDAAALRTTATRDGDHWVLNGVKQFITSGKHADVAIVMAVTDKAAGKRGISAFLVPTST 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    RL++K+G  S+ T ++ F +      G L  + G    M  L  L+   + ++ 
Sbjct: 189 PGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG-AQGEGYRM-ALSGLEGGRIGIAA 246

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +       A+ YA+ R   G  L     ++  +A++A  I  A  + +   +  D 
Sbjct: 247 QSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMATRIDVARQMVWHATSLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A       K    +MA  V ++A++  GG GY+ +  + R YR+     I
Sbjct: 307 GRPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGYVSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   + +   L
Sbjct: 360 YEGTSDIQKILIARAL 375


>gi|150395373|ref|YP_001325840.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150026888|gb|ABR59005.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 598

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 105/542 (19%), Positives = 190/542 (35%), Gaps = 90/542 (16%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERWDK---VEFHPAWHALLRRSIHDGLHCSI 119
            + +    E A++A     P   +    G R  +   V     +          G     
Sbjct: 36  DMTAAILGEAAKLAEEVLFPINLSGDQEGCRRHEDGSVTVPGGFKEAYDLYRQAGWLGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               F        + +  A    M+      +M P +T  ++ A+    +    + + PK
Sbjct: 96  APEEFGGQGLP--YTLHTAVGEFMSAANMSLMMYPGLTQGAIAAILVHGSEEQKRAYLPK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   GTD+  + ++     DG Y +SG K F+S+
Sbjct: 154 MVDGTWTGT-------------MNLTEPHCGTDLGLLRTRAVPNGDGSYRISGQKIFISA 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGN 281
              D       ++LA++EG       +  F+VP+   D        NG+    +++K+G 
Sbjct: 201 GEHDMAENIVHLVLARIEGAPDGVKGISLFIVPKFRLDAGGEPSERNGVSCGAIEHKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             NAT  + +    G+L+G  N     +  M     L   +  +S   V+   A +YAR 
Sbjct: 261 HGNATCVMNYDEATGYLIGTENKGLSAMFVMMNEARLAVGMQGLSIAEVAYQNAANYARD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---- 385
           R                  +I  P ++RA+  I        A +   A   D A      
Sbjct: 321 RIQGRSLSGPKSPDKKADPIIVHPDIRRALLTIKAFNEGGRAFTLWTALKSDIAHRSESE 380

Query: 386 --RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R        +M PI K             A +  GG GYIEE  ++++ R++    I 
Sbjct: 381 EERQTADDILSLMTPILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIY 440

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     LD++                  +   + G+ V+ + ++    C+E+      
Sbjct: 441 EGANGIQALDLVG----------------RKLALNGGRAVMALFKEIGDFCEEN-----R 479

Query: 504 LTEKIALASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAHIIDSL 558
             EK++  + A    + G+ND+      F++N     DN         G  +  H+   +
Sbjct: 480 NDEKLSAYTKA---LKKGLNDLQSATMWFMQNAMAKPDNAG------AGSTDYMHLFGLV 530

Query: 559 YL 560
            L
Sbjct: 531 VL 532


>gi|296502892|ref|YP_003664592.1| acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|296323944|gb|ADH06872.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
          Length = 569

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 154/414 (37%), Gaps = 38/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKK------VITILRDSISLCKEDKGL 500
            V  +L K     E   + +E D+ +  +          +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQIEQLED--TEVESDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|209886008|ref|YP_002289865.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
 gi|209874204|gb|ACI94000.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
          Length = 597

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 108/534 (20%), Positives = 202/534 (37%), Gaps = 78/534 (14%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHD 113
                     +   +E  R A      L+      G   +   V   P W    R     
Sbjct: 28  HYRAYDAETAAAVIEEAGRFATEVLAPLNRVGDEHGATLKDGNVTTSPGWRDAYRNWAEA 87

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
           G +    D +F          + AA   + +       + P +T+ ++ A+    +  + 
Sbjct: 88  GWNSLTGDEAFGGQDLPI--VLHAACSEIWSAANMAFGLCPLLTAGAIEAIGVHGSDDLK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +  K+ S  +  T             + LTE + G+D+ A+ +  +  +DG Y LSG 
Sbjct: 146 RIYLEKLISGAWTGT-------------MQLTEPQAGSDVGALRTHAETQADGSYRLSGT 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    D       ++LA++ G       +  F+VP+ L +     G+ N +    L
Sbjct: 193 KIFITYGDHDMTENIVHLVLARLPGAPEGTKGISLFVVPKFLVNADGSLGARNDIYASGL 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G   + T  +   +     G+LLG+ N     +  M     L   +  V     ++
Sbjct: 253 EHKLGIHGSPTCTMTMGDHGGAVGYLLGEENNGMACMFTMMNQARLGVGLEGVGIAERAM 312

Query: 333 AEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +AI YAR R               +I  P +KR +  +    AAA  + +  A + D A
Sbjct: 313 QQAIAYARERRQGRAIGKKDGGPDPIIVHPDVKRNLVTMRALTAAARTICYATAVAIDVA 372

Query: 384 KS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +       R++ +A A ++ P+ K +   +A    A  ++  GG+G+IEE   A++ R++
Sbjct: 373 RESTDENIRTKASARAGLLTPLAKAFSTDIANDAAALGVQVHGGAGFIEETGAAQYIRDA 432

Query: 438 PANSILLGSGNAMVLDVLN---LLEKGTNL---------------------FEQLFSTLE 473
              +I  G+      D++     ++KG  L                     F    + L+
Sbjct: 433 RILTIYEGTNGIQANDLVMRKLAVDKGAALNDLCAELAAIVARVAASNDPTFGATAARLQ 492

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
             LGS  +    +L  + S   E    A      ++LA+    L R  ++  AD
Sbjct: 493 DALGSVERASRWLLDKAASAPNEALAGATPYLRLLSLATGGCLLAREALDGRAD 546


>gi|169632453|ref|YP_001706189.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169151245|emb|CAO99931.1| acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 600

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/485 (17%), Positives = 166/485 (34%), Gaps = 63/485 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAANFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +  I  + +   +    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSEEQKNTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 264 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  +    I+   +   K++  +  F+ 
Sbjct: 444 TTEIQALDLLG-------------RKVLQTQGAMLRDFTKIVHKFVEANKDNAAMKEFVE 490

Query: 506 EKIAL 510
              AL
Sbjct: 491 PLAAL 495


>gi|301166570|emb|CBW26146.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 605

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/482 (17%), Positives = 171/482 (35%), Gaps = 49/482 (10%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAG 149
           GE++D+    P    ++R     GL        +  +    +   R  A +  M    A 
Sbjct: 73  GEKFDEEAKIPD--EVIRGLAELGLCGLAVPEEYGGMQLDYSLYSRVFAEVASMDGSTAT 130

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +        +    TP   + W P + S E                   LTE   G+
Sbjct: 131 MLGAHQSIGYRALLNEGTPEQKEKWLPSLASGE-------------KLASFCLTEPGSGS 177

Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR---LLEDG 265
           D  +I ++  K  DG + ++G K W  ++  ++ + +  + +      +V +    + + 
Sbjct: 178 DAYSIKTKAIKNDDGSFTITGQKLWITNAGTAEFYTVFCKTDHEKDGKMVEKISCFIIEK 237

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+ +   +NK+G R++ T  + F          L  +  G    M +L    L    
Sbjct: 238 GMEGVSFGEKENKMGIRASETRAVYFDKVKVPAENVLGELGKGFKIAMNVLNSGRLSLGA 297

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V GM+  L  A  +A+ R   G  + D  ++++ +A +A    A  ++ +    +  +
Sbjct: 298 GCVGGMKTILKMATEHAKGRKQFGAPISDFGLIQQKLAFMAARCYATESIVYMTTGNMIK 357

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +         +   I K +  +    V+   ++   G+GY++E    R  R+S  N I
Sbjct: 358 GMND------YFLETAICKVYGSESLWTVVDTGLQIAAGNGYMKEYPYERIMRDSRINLI 411

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL--------------- 487
             G+   +   +     KG +   +    +  D+ S+ K  I  L               
Sbjct: 412 FEGTNEILRCFLALSGMKGPSDSLKELGKVS-DVSSALKDPIKSLGVLSDFAKKRISKMI 470

Query: 488 --RDSISLCKEDKGLARFLTEKIA-LASSA-AALYRAGMNDIADVFLENRFLDNCHSTHC 543
             R       E +  A + +  +A  A      L + G   I + + + R  +     + 
Sbjct: 471 ASRALTKAHPELEEYANYFSSMMASFAIQVENTLIKHGKKIIGNEYPQGRLSNMATELYV 530

Query: 544 ML 545
           ML
Sbjct: 531 ML 532


>gi|296532865|ref|ZP_06895534.1| probable isovaleryl-CoA dehydrogenase protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296266821|gb|EFH12777.1| probable isovaleryl-CoA dehydrogenase protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 408

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 145/400 (36%), Gaps = 31/400 (7%)

Query: 73  LARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
           L   A+    Q+ A+      P     D     PA   L R+    GL     + +    
Sbjct: 31  LGEAADALREQIRAFAAKEIAPRAAAIDAENDFPA--DLWRKFGDLGLLGITVEEAEGGS 88

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H I    +   +   A    + S    + +           + PK+ S E+   
Sbjct: 89  GLGYLEHVIAMEEISRASASVALSYGAHSNLCVNQIRRHGNVAQRARYLPKLISGEH--- 145

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + ++  D         W  + P +D  ++ 
Sbjct: 146 ----------VGALAMSEPEAGSDVVSMRLRAERQGDHYRLNGSKMWITNGPDADVLVVY 195

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   + +    G    R  +K+G R + T EL F          L    
Sbjct: 196 ARTDPAPGPRGISAFVVEKGFPGFRPGRKLDKLGMRGSNTAELVFEECRVPAENRLGEEG 255

Query: 307 GPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
             V  +   +  + A+++   +  MR  L   + Y R+R   G  + +  +M+  +AD+ 
Sbjct: 256 QGVNILMSGLDYERAVLAGGPLGIMRACLDLVLPYLRQRRQFGRPIGEFQLMQGKLADMY 315

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A  + +A + D  +   ++AA A + A            A+  EA++C+GG+G
Sbjct: 316 TRMNAARAYVYTVARACDRGQVTRQDAAGAILHAAEAA-------TALALEAIQCLGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           YI E    R  R++    I  G+     + +   L  G  
Sbjct: 369 YINEYPAGRLLRDAKLYEIGAGTSEIRRMLIGRELMAGQG 408


>gi|239825998|ref|YP_002948622.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
 gi|239806291|gb|ACS23356.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70]
          Length = 401

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/388 (19%), Positives = 141/388 (36%), Gaps = 42/388 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  +      + +R     L        +  +     +   A     + + + 
Sbjct: 27  PYIKEWDERGYFD--PNIFKRLAELNLMGVCIPEEYGGMGMD--YNSLAIVCEELERGDT 82

Query: 149 GHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K       GLTE 
Sbjct: 83  AFRTAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQAKGEKIGAFGLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A+I++   +  D  Y L+G K ++S   ++D FI+ A  +       +   + +
Sbjct: 130 NAGSDVASISTTAVRDGD-YYILNGQKTWISLCDIADHFIVFAYTDKSKKHRGISAFIVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM 323
            +  G   + +K K+G R+  T EL F N         N+     E  KI +  LD+   
Sbjct: 189 RTMPGFSSKAIKGKLGIRAGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSALDNGRF 245

Query: 324 SVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L +++  
Sbjct: 246 TVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQISRLLVYKVGF 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ +  + EA+ A+ +A       C  A     +A++  G  GY  E  + R+ R S 
Sbjct: 306 LKNQGRRTTREASLAKWIA-------CDFANQAADDAVQIHGAYGYSNEYPVERYLRNSK 358

Query: 439 ANSILLGSGNA----MVLDVLNLLEKGT 462
           A  I  G+           VL   +   
Sbjct: 359 APVIYEGTREIHTIMQAEYVLGYRQDKP 386


>gi|319426128|gb|ADV54202.1| isovaleryl-CoA dehydrogenase, LiuA [Shewanella putrefaciens 200]
          Length = 389

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 151/407 (37%), Gaps = 43/407 (10%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  L    Q+ A  AN   P          + D     P  + L       GL   
Sbjct: 12  LGEDVDMLRDAVQDFA--ANEIAPI-------AAKVDHDNAFP--NELWPVLGGMGLLGV 60

Query: 119 IWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                F    +   AH +    +   +        + S    + +           + PK
Sbjct: 61  TVPEEFGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPK 120

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++    +K  D         W  + 
Sbjct: 121 LVSGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P ++ +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +    
Sbjct: 168 PDANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVP 227

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
              + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +
Sbjct: 228 ---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGE 284

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+   + AA A  + +A S D  ++  ++AA A         +  ++A  +
Sbjct: 285 FQLVQGKLADMYTGMNAAKAYVYSVAKSCDRGETTRKDAAGA-------ILYSAELATKM 337

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A++ +GG+GY+ E +  R  R++    I  G+     + +   +
Sbjct: 338 ALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREI 384


>gi|307295778|ref|ZP_07575611.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878434|gb|EFN09655.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 387

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 131/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +   ++   GL        +  V     H++          +E   +   +   A  + 
Sbjct: 48  RSFWEKAAEAGLLGLSTSTEYGGVGGDFRHEVILMEQIGRRGIEGWDVTLHNAIVAPYIE 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W PKI S EY                + +TE   G+D+  + +  +K  +
Sbjct: 108 TYGTEEQKQRWLPKIASGEY-------------ITAIAMTEPGAGSDLQGVKTTAKKEGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGN 281
             Y ++G K F+++  +   + ++A+ +  +G   +  ++ +     G    R  +KIG 
Sbjct: 155 -QYTINGSKTFITNGQNANLVAVVAKTDPALGAKGISIVMVETDDAQGFERGRNLDKIGR 213

Query: 282 RSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
               T EL F++        L  +       + +      L  A+ + + M   L   + 
Sbjct: 214 DCADTSELFFNDVRVPTSNLLGPEEGKGFFQLMEKLPQERLILAVQAAAAMEYILRITVD 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  +ID    +  +A+       A        +   + +  S  A+ A    
Sbjct: 274 YVRERKAFGKAVIDFQNTQFKLAEYKTQATIAKVFVNHCVSLHIKGELDSATASMA---- 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW       V+   ++  GG GY+ E  IA+ ++++  N I  G+   M L +   
Sbjct: 330 ---KYWVSDALWEVVDGCLQLHGGYGYMSEYPIAQAFKDARINRIYGGTNEIMKLLIART 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|229588382|ref|YP_002870501.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229360248|emb|CAY47105.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 378

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 133/375 (35%), Gaps = 32/375 (8%)

Query: 95  DKVEFHPAWHA-------LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           D   FH  W         L  ++   G+ CS    ++  +     +            L 
Sbjct: 25  DAAPFHGQWEKQGYIDRSLWSKAGEAGMLCSHLPEAYGGLGADFLYSAVVIEEISRLGLT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +  +   + PK+ S E                 + +TE   
Sbjct: 85  GIGFSLHSDIVAPYILHYGSEALKHKYLPKLISGEM-------------VTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  + +      D  Y ++G K F+++   ++  I++A+ + + G       L +  
Sbjct: 132 GSDLQGVKTTAVLDGDE-YVINGSKTFITNGYLAELVIVVAKTDPKAGAKGTSLFLVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    +   K+G ++  T EL F +        L     G    M+ L    L  AI 
Sbjct: 191 TPGFDKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQELPQERLTVAIG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S    +LA  + Y R R   G  + D    +  +A++A +I              D+ 
Sbjct: 251 ALSSAEAALAWTLEYTRERKAFGKAIADFQNTRFKLAEMATEIQIGRVFV-------DKC 303

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +   E       A + KYW   +   V+ E ++  GG G++ E  IAR + ++    I 
Sbjct: 304 MALHLEGKLDVPTAAMAKYWATDLQCKVLDECVQLHGGYGFMWEYPIARAWADARVQRIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 AGTNEIMKEIIARAL 378


>gi|226946604|ref|YP_002801677.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226721531|gb|ACO80702.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 601

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/505 (20%), Positives = 180/505 (35%), Gaps = 70/505 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            V+    +E AR        L+      G  W +  V+    +    RR +  G      
Sbjct: 37  DVVDAILEEGARFCEEVIAPLNRVGDLEGCSWSEAGVKTPTGFKEAYRRFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
                     ++  +  A   ++ +      M P +   +M  L    T      +  ++
Sbjct: 97  AVEHGGQGLPES--LGVAMTEMIGEANWAWGMYPGLAQGAMNTLSAHGTGEQKATYLARL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+  T             + LTE   GTD+  + ++ +  +DG Y +SG K F+S+ 
Sbjct: 155 VSGEWTGT-------------MCLTEPHCGTDLGLLRTRAEPQADGSYRVSGTKIFISAG 201

Query: 239 MSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G+ N +    +++K+G  
Sbjct: 202 EHDLAENIVHIVLARLPDAPPGTKGISLFIVPKFLPADDGGLGARNQVSCGSIEHKMGIH 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
            NAT  + F    GFL+G  N     +        L +A+  ++   V+   AI YAR R
Sbjct: 262 GNATCVMNFDGATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGAIRYARER 321

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                             +I  P ++R +  I        AL +  A   D A+   + A
Sbjct: 322 LQMRALSGPKAPELPADPIIVHPDVRRMLLTIKAFAEGNRALLYFSARQVDIARCSQDAA 381

Query: 391 AYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             A        + PI K +  +      +  ++  GG GYI E  + ++ R+S    +  
Sbjct: 382 ERAAADLLLGFLTPIAKAFMTETGFEASSLGLQVYGGHGYIREWGMEQNLRDSRIAMLYE 441

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           G+     LD+L                +    G S K    I+        ED+GL R  
Sbjct: 442 GTTGVQALDLLG-------------RKVLMTQGESLKVFTKIVHKFCKAHAEDEGL-RVF 487

Query: 505 TEKIALASS--AAALYRAGMNDIAD 527
            E +A  +        + GM  + D
Sbjct: 488 VEPLARLNKEWGDITLKIGMQAMQD 512


>gi|19684166|gb|AAH25963.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo
           sapiens]
 gi|123982738|gb|ABM83110.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic
           construct]
 gi|123997405|gb|ABM86304.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic
           construct]
 gi|311349322|gb|ADP91826.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349344|gb|ADP91837.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349370|gb|ADP91850.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
 gi|311349376|gb|ADP91853.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo
           sapiens]
          Length = 412

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 139/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +          +   P    KI +  LD   + ++
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A   D
Sbjct: 277 SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    
Sbjct: 337 NKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   L +
Sbjct: 390 IYEGTSEIQRLVIAGHLLR 408


>gi|307320351|ref|ZP_07599769.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306894073|gb|EFN24841.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 380

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 136/378 (35%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P     LR +   G+               +                 
Sbjct: 26  PHAIDWDQQKHFPV--ETLRSAAALGMAGVYIRDDVGGTGLTRLDAAMIIEALATGCPAI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T    +   P             P+    V     LTE   G
Sbjct: 84  ASFVSIHNMCAGMIDRYGTDEQRRRLLP-------------PLLTMDVLASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L+G K F+S    S  +I++A+  G  G   +   + +   
Sbjct: 131 SDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMART-GEEGPKGISAFVVEKDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G  +  T  +   N    +    N      E  +I +       L+ A
Sbjct: 189 PGLTFGANEKKMGWHAQPTRAVMLDNVRVSV---ENRLGAEGEGFRIAMAGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A+ Y + R   G  + +   ++  +AD+A D+  A    +R A + D
Sbjct: 246 AASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEVARTFLWRAACALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A         A  +  + K +      +V  +A++  GG GY+ +  + +  R+   + 
Sbjct: 306 AADPE------ATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLE 459
           IL G+   M L V   + 
Sbjct: 360 ILEGTNEIMRLIVSRAIM 377


>gi|118616613|ref|YP_904945.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99]
 gi|118568723|gb|ABL03474.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99]
          Length = 390

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/399 (20%), Positives = 148/399 (37%), Gaps = 38/399 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q  A  A+          P    WD  +  P    +LR +   G+             
Sbjct: 11  ITQTAAAFAD------KRLAPYALEWDATKHFPV--DVLREAAELGMAAIYCREDVGGSG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            ++   +R      +A       +S       M+    T    KDW P++ +        
Sbjct: 63  LRRLDGVRIFEQLAIADPVTAAFLSIHNMCTWMIDSFGTDEQRKDWIPRLATM------- 115

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFI 244
                        LTE   G+D +A++++  +        Y L G K F+S   + D ++
Sbjct: 116 ------DAIASYCLTEPGAGSDASALSARAVRQGSAPGSDYVLDGVKQFISGAGASDVYV 169

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           ++A+  G  G   +   + +    GL +  L+ K+G  +  T ++            L  
Sbjct: 170 VMART-GAEGPRGISAFIVEKGTPGLSFGALEEKMGWHAQPTAQVVLEGVRVPADAMLGG 228

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G      I +       L+ A  S+ G + + A+   Y R R   G  L+D+P ++  
Sbjct: 229 VDGTGAGFGIAMNGLNGGRLNIAACSLGGAQSAFAKTGAYVRERQAFGASLLDEPTVRFT 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + A+  L +R AN+ DE  +   E      +  + K +       V  +A++ 
Sbjct: 289 LADMATGLEASRMLLWRAANALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQL 342

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            GG GY+ E  + +  R+   + IL G+   M + V   
Sbjct: 343 HGGYGYLREYGLEKIVRDLRVHRILEGTNEIMRVVVGRA 381


>gi|24660351|ref|NP_648149.1| CG12262 [Drosophila melanogaster]
 gi|28376845|sp|Q9VSA3|ACADM_DROME RecName: Full=Probable medium-chain specific acyl-CoA
           dehydrogenase, mitochondrial; Short=MCAD; Flags:
           Precursor
 gi|7295201|gb|AAF50524.1| CG12262 [Drosophila melanogaster]
 gi|19528339|gb|AAL90284.1| LD22634p [Drosophila melanogaster]
 gi|220956380|gb|ACL90733.1| CG12262-PA [synthetic construct]
          Length = 419

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 135/406 (33%), Gaps = 43/406 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR        P    Y   G      E+      +++++   GL  +        
Sbjct: 43  QLQELARKFTREEIIPVAAQYDKSG------EYP---WPIIKKAWELGLMNNHIPADIGG 93

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +         +A             +  S    + V L       K +  ++        
Sbjct: 94  LDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLL------- 146

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D++ I ++ +K  D         W  +  +++ + +L
Sbjct: 147 ------EEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVL 200

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    GL   R +  +G R++ T  + F +         N
Sbjct: 201 ARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVP---KEN 257

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   +  L EA+ YA  R   G  +     ++ 
Sbjct: 258 VLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQF 317

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +       A   D+ +  S         A I K     MA  + ++A++
Sbjct: 318 MLADMAIGVETSRLAWRLSAWEIDQGRRNS-------YYASIAKCHAADMANKIASDAVQ 370

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+G+  E  + +  R++    I  G+     L +   + +   
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416


>gi|229115816|ref|ZP_04245218.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
 gi|228667699|gb|EEL23139.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3]
          Length = 569

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEKHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAILNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIITYGAESAAYRTAGVIDDAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEDTEVEIDIATVERNHRYILLAKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|93006278|ref|YP_580715.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393956|gb|ABE75231.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 597

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 83/528 (15%), Positives = 176/528 (33%), Gaps = 63/528 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSI 111
               +     ++    +  A  A      L+      G +++  +V     +    +   
Sbjct: 27  LPAFQEADRELMDSLFEMAASFAENELSPLNQSGDAEGCQFNNGQVTTPKGFKEAYKAYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      +  F       +       +   A          S  +   +    T    
Sbjct: 87  ELGFPALSAEEDFGGQNMPFSLSTVINEMVGTANWSFSMYPGLSHGAIQTIEHHGTDEQK 146

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +  K+ S E+  T             + LTE   G+D+  I ++ +   DG Y ++G 
Sbjct: 147 QTYLEKMVSGEWSGT-------------MCLTEAHAGSDLGIIRTKAEPKEDGSYSITGQ 193

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       I+LA++ G       +  F+VP++  +     G  N +    +
Sbjct: 194 KIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDGSLGENNNVVCGSI 253

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G +++AT  + F    G+L+G  N     +     +  + +A+  ++    +   +
Sbjct: 254 EHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAVQGLTAAEYAFQGS 313

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
           + YA+ R                  +I  P ++  +           AL + L++  D  
Sbjct: 314 LTYAKDRLAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGRALVYYLSHFADTV 373

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              E  +         ++ PI K +  +         ++  GG G+I E  + ++ R++ 
Sbjct: 374 AKGEGDALKFADQMLSLLTPIAKAFLTETGLEAANHGVQVYGGHGFISEWGMEQNVRDTR 433

Query: 439 ANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLE---------QDLGSSGKKVITIL 487
              +  G+     LD+L     G    L       ++          ++G   + +   L
Sbjct: 434 IACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKENDEMGQFIRPLAKHL 493

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535
           ++   L       A   TE       AA  Y      +   +L  R  
Sbjct: 494 KEWGDLTARIGMQA---TENPDAVGGAAVDYMYFSGYVTLAYLWARMA 538


>gi|289743333|gb|ADD20414.1| short-chain acyl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 416

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 140/369 (37%), Gaps = 29/369 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E H    ++++    +GL     D                A  +L   L    L      
Sbjct: 67  ENHKFEESVVKAMFENGLMGIEIDSELGGS----------ACNFLTTILTVEELSKVDPA 116

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A++V +  T  +      K+ ++E       P           LTE   G+D  ++ + 
Sbjct: 117 VAALVDIHNT--LVNSLIMKVATKE-QKEKYLPKLAQEYPGSFALTEPGSGSDAFSLKTV 173

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K            W  +S ++  FI+ A  +   G   +   L + +  GL   + ++
Sbjct: 174 AKKDGKDYVINGTKMWISNSDLAGLFIVFANAKPEDGYRGITTFLVERNTPGLTVNKPED 233

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI 336
           K+G R++ T  + F +     + + N+        K    +L+   + ++   + LA+  
Sbjct: 234 KLGIRASGTCMVTFEDVR---IPEENLLGTFGHGYKYAAGFLNEGRVGIAAQMIGLAQGC 290

Query: 337 -----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R   G  + +   M+  IA +A +I AA  L++  A   +      +EAA
Sbjct: 291 FDHTIPYLMDRKQFGTEVYNFQSMQHQIAAVATEIEAARLLTYNAARMVEHGIPFVKEAA 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       KY+  ++A     + ++ +GG G+  +    ++YR+    +I  G+ N  +
Sbjct: 351 MA-------KYYASEVAQRATIKCIDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQL 403

Query: 452 LDVLNLLEK 460
             +  L++K
Sbjct: 404 STIAKLIKK 412


>gi|293602002|ref|ZP_06684458.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292819625|gb|EFF78650.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 388

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 141/381 (37%), Gaps = 33/381 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           QL        R D+V        L+R     G+       ++          IRAA    
Sbjct: 22  QLVPREAEVARLDEVP-----DDLVRAMAEQGMFGYSIPETYGGAGMSTEELIRAAIELS 76

Query: 143 MAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
              +     + + +   +  +    T +    + P++ S E             +     
Sbjct: 77  QCSVAFRARVGTNTGIGSEALVADGTEQQKDRYLPRLASGE-------------LTGCFA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVP 259
           LTE + G+D  A+ +   +  D  Y L+G K F+++ P++  F ++A+ +    G   + 
Sbjct: 124 LTEPQAGSDATALRTTAVRDGD-SYVLNGEKCFITNAPLAGLFTVMARTDPDAPGAKGIS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL-- 315
             + +    GL   +  +K+G   +    + F N        +      G    MK+L  
Sbjct: 183 AFIVERDTPGLSTGQPYDKMGQAGSPVSAVYFDNCRVPAANVIGGQEGMGFKTAMKVLNK 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A + +      L + + +   R   G  L++  +++  +AD   DI AA AL  +
Sbjct: 243 QRIHLAALCIGPAIRMLDDTLRFVAERQQFGKPLMEFQLIQAMLADCQTDIQAALALVLQ 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  +       + A I KY+  +M   V    ++  GG GYI ++ I R YR
Sbjct: 303 TARERDAGQDVT-------MNASICKYFASEMCGRVADRCVQMHGGYGYIADQGIERFYR 355

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +     +  G+     L +  
Sbjct: 356 DVRLFRLYEGTSQIHQLTIAR 376


>gi|262373555|ref|ZP_06066833.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
 gi|262311308|gb|EEY92394.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           junii SH205]
          Length = 607

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 174/459 (37%), Gaps = 59/459 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G     +   F          +   +  +M        M P 
Sbjct: 72  EVTTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLP--MSLNLIKSEMMGTANWSFTMYPG 129

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +++  M  +    T      + PK+    +  T             + LTE + GTD+  
Sbjct: 130 LSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGTDLGQ 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ +
Sbjct: 177 VKTKAEAAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDSPAGTRGISLFIVPKFI 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    +++K+G R++AT  L F N  G+L+G++N     +        
Sbjct: 237 PTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEINKGLHAMFTFMNTAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALD 365
           + +A+  ++   +S   A+ YA+ R     +SG          +I    ++R +      
Sbjct: 297 IGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLTQKAV 356

Query: 366 IAAATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAM 416
                A+ +  A   D   +A +  ++AAY           PI K +  ++        +
Sbjct: 357 AEGGRAMIYHAAKLADKMADALASGDQAAYEAADDKLGFYTPILKGFLTELGLEAANHGI 416

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473
           +  GG G+I+E  + +  R++  +++  G+     LD+L    LL     +     + + 
Sbjct: 417 QVYGGHGFIKEWGMEQIARDARISTLYEGTTGVQALDLLGRKVLLSSKGKVVRDYTAEIL 476

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +  +     LR       +       LT +I LA+
Sbjct: 477 KFCAAHARN--KYLRRFAWDLTKLCAQWNTLTVRIMLAA 513


>gi|294010955|ref|YP_003544415.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292674285|dbj|BAI95803.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 600

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/480 (16%), Positives = 162/480 (33%), Gaps = 55/480 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     + A     +  G         +             +   L A L        + 
Sbjct: 73  VTTPTGFKAAYDTYVEGGWTTLNAPIEYGGQGLPSIVGTAVSEYTLSANLSFKMYHGLTN 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +    + + P + S ++  T             + LTE   GTD+  I +
Sbjct: 133 AAVEALIAKGSEEQKRTYIPNMVSGKWAGT-------------MNLTEPHCGTDLGLIKT 179

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +     DG + ++G K F+S+   D       ++LA+          +  F+VP+ L + 
Sbjct: 180 RAVPGPDGSFTITGTKIFISAGEHDLTENIIHLVLAKTPDAPEGSRGISLFVVPKFLVNE 239

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N +    L++K+G   N+T  + +    G+L+G+ N     +  M     L  
Sbjct: 240 DGSLGKRNAVSCGSLEHKMGIHGNSTCVMNYDGATGWLVGEENKGLAAMFIMMNAARLGV 299

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  ++   V+   A  YA  R                  L   P ++R + +       
Sbjct: 300 GLQGLAQAEVAYQNAAAYAHERRQGRALTGPQDPQEKADTLFAHPDVRRMLMEARALTEG 359

Query: 369 ATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             AL    A   D A      + R       +++ P+ K +       V   A +  GG 
Sbjct: 360 LRALMLWGALQVDLAHQAATEEERQAADDLLQLLTPVIKGYGSDKGFDVTVMAQQVFGGH 419

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS- 479
           GYI E  + ++ R++    I  G+     +D++   L   G    +     + +++  + 
Sbjct: 420 GYIWENGVEQYVRDARIAQIYEGTNGVQGMDLVGRKLPMNGGRALQAFLKIVGEEVAQAK 479

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENRF 534
           G + +    +++       G A     + A+     A + A  Y   +  +A   +  R 
Sbjct: 480 GDEKLAGFAEALEKASGQLGAATMWLMQNAMKNPDNAGAGAVHYMHILGIVATGLMWLRM 539


>gi|254480257|ref|ZP_05093505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039819|gb|EEB80478.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 589

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/556 (17%), Positives = 196/556 (35%), Gaps = 64/556 (11%)

Query: 30  LFIGMNAYSSDSLLVA--LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
               MN +  D +L A   +   P         +G  + +    E A++A     +L   
Sbjct: 7   PVEDMN-FLIDEVLDAENALGTLPDFAD---YGVGSELTTALLDEAAKLA---GDELAPL 59

Query: 88  GPGGERWDKVEF------HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
              G+    V         P + A LR+    G      D  +      + +      ++
Sbjct: 60  RRVGDEQPAVCTDGAVTAPPGYDAALRQLAEGGWIGISSDPRYGGQGLPEIYNTVGHEMW 119

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +  G     S  +A  +    T    + +  K+ + ++  T             + 
Sbjct: 120 NGANMALGLAPMLSSGAALAIHAHGTEAQKQTYLEKMNTGQWMGT-------------MN 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   G+D+  + ++     D  Y +SG K +++            ++LA++       
Sbjct: 167 LTESGAGSDLGVMKAKAVPEGDH-YRISGQKIYITWGDHQSTENIIHLVLAKLPDAPEGS 225

Query: 252 -RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  F+VP+ L +     G  N +     ++K+G   + T  + F +     G+LLG+ 
Sbjct: 226 RGISLFIVPKFLVNDDGSLGERNDVYPVSCEHKLGIHGSPTCVMAFGDDEGAIGYLLGEK 285

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +  M         + ++     SL +A  YAR R   G  +I+ P +KR +  +
Sbjct: 286 NRGLACMFTMMNEARHKVGVQALGASEGSLQKAAAYARDRVQGGVPIIEHPDVKRMLLTM 345

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAME 417
                A   L++  A + D A    +E      +   +M P+ K W  ++A  V +  ++
Sbjct: 346 KSMCEAMRGLAYTEAVTMDLAHRGPQEDRPLQQSRIDLMIPVIKGWLSEVAQEVTSLGLQ 405

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ- 474
             GG G++EE   A++ R+     I  G+       L    L   G    E + + +   
Sbjct: 406 VHGGMGFVEETGAAQYLRDVRITPIYEGTNGIQAADLVSRKLGRDGGATMEAMMTEVNAT 465

Query: 475 --DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
              L ++G   +T +  S++    D+  A  +       +         +    +  ++ 
Sbjct: 466 ITRLQAAGDARLTGIAGSLTRAMADQENATRIV-----LAELKEDPNVALGASFEYMMQT 520

Query: 533 -RFLDNCHSTHCMLHG 547
                  H     L  
Sbjct: 521 GYLFGGWHLGRSALVA 536


>gi|300693543|ref|YP_003749516.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299075580|emb|CBJ34873.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 377

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 131/399 (32%), Gaps = 43/399 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               + AR        P    +   G   D V           +    GL   I    + 
Sbjct: 10  RMILDAARDFATERLAPHAAQWDRDGNLPDDVV---------AQMGELGLLGMIVPPEWG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +      L   T      + P + +    
Sbjct: 61  GAYTDYVAYALALEEIAAGCAACATMMSVHNSVGCGPILKFGTDAQKARYLPDLATG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF- 243
                            LTE + G++   + ++     DG + L+G K F+++       
Sbjct: 118 ----------RAIGAFCLTEPQAGSEANNLRTRAVPR-DGHWVLNGSKQFVTNGARARLA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R ++K+G R++ T  +   +         N
Sbjct: 167 IVFAVTDPGAGKRGISAFIVPTDTPGFQVGRPEHKLGIRASDTCPITLDDCAVP---QAN 223

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E +KI +       +  A  +V   R +   A HYA  R   G  L +   +  
Sbjct: 224 LLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARHYANERIQFGKALREHQTIAN 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A      K    E       A   K +  ++A  + ++A++
Sbjct: 284 MLADMATRLNAARLLVHHAARLRSADKPCLSE-------ASQAKLYASELAEEICSKAIQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ + ++ RHYR++    I  G+     + +  
Sbjct: 337 IHGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|224083576|ref|XP_002192817.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 8
           [Taeniopygia guttata]
          Length = 390

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 134/377 (35%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 37  PYMAEWDEKEIFPV--ETMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTST 94

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS       M+         + + P + S E                   LTE   G
Sbjct: 95  TAYMSIHNMCVWMIDTFGNEEQRRRFCPSLCSME-------------KFASYCLTEPGSG 141

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  Q+  D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +   
Sbjct: 142 SDAASLLTSAQRKGD-TYVLNGSKAFISGGGDTDVYVVMCRT-GGPGPKGISCLVLEKGM 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   LG                 ++ A  S
Sbjct: 200 PGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVDNRLGAEGQGFSIAMQGLNGGRINIASCS 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L +   ++  +A++A  + AA  +    A +  E +
Sbjct: 260 LGAAHASVLLAQEHLTVRKQFGEPLANNQYLQFGLAEMATRLLAARLMVRNAARALQEGR 319

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A ++  + K +       +  +A++  GG GY+++ ++ +  R+   + IL 
Sbjct: 320 QD------AAVLCSMAKLFATDECFGICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILE 373

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+   M + V   L +G
Sbjct: 374 GTNEVMRMIVARNLLQG 390


>gi|118431019|ref|NP_147195.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|116062346|dbj|BAA79340.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 543

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 115/514 (22%), Positives = 218/514 (42%), Gaps = 40/514 (7%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           A  +  +  G+N Y  D  L   +  F +    +L  LGEYV +   +   R+   + P 
Sbjct: 6   AFGEVSMAYGLNHYLVDKPLRDTLRYF-TSKEPDLAGLGEYVGTELYEVAYRVDRLSWPV 64

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +   GER D V   PA    + R +++      +  +  P V    H+   A + L+
Sbjct: 65  HVMWSVRGERSDTVLVDPALRRAVDRLMYE------YGVNRHPYVGGSWHE-HFAGINLV 117

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                G +++ ++ +A  +       +   +      R     ++ PM           T
Sbjct: 118 GDPGVGCILTITMQTAYALWKYGGEELKHYY------RRLAGLDRPPM-----IGATWFT 166

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRL 261
           E +GG+D+ A  +  +K  DG++ L+G+K+F S   ++D  ++ A+ EG   G   +   
Sbjct: 167 EIQGGSDLGANETVARKAGDGVWLLTGYKYFASGAGLADIALVTARPEGAPAGAKGLSLF 226

Query: 262 LEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G       +RLK+K G  +  T E+E  ++  +L+GD +       +  ++  
Sbjct: 227 AVPRYRRGGGLNYSVRRLKDKSGTIAVPTGEVELQDSEAYLIGDADKGIYYTLEDLMISR 286

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++  +V   R +  EA +YA+ R   G  +I+ P+++R + ++ + I  + AL+ +  
Sbjct: 287 IANSAGAVGIARKAYLEAYNYAKHRRAFGKRIIEHPLVRRDLLEMEVLIEESLALTHKAV 346

Query: 378 NSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           + F+    +    S    YAR+M  I K    + A  V   AME  GG G++ E ++ R 
Sbjct: 347 DLFEKSTGDRPPYSMTYHYARLMTHIAKNMTAQAAARVTMLAMELFGGIGFLREYAVERW 406

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-----GKKVITILR 488
           +RE+    I  G+ N   LD+L  + K     + L   L    G +       K +    
Sbjct: 407 HREALITPIWEGTSNIQALDMLEAMWK-KGAHKPLLEDLRALAGDAYDKGLASKAVEAAE 465

Query: 489 DSISLCK-----EDKGLARFLTEKIALASSAAAL 517
           +++         + +  A++  E +  ASS   L
Sbjct: 466 ETVRRLASMSPSQAEFNAKYALEDLGHASSTVIL 499


>gi|167524819|ref|XP_001746745.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775015|gb|EDQ88641.1| predicted protein [Monosiga brevicollis MX1]
          Length = 630

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 80/438 (18%), Positives = 166/438 (37%), Gaps = 55/438 (12%)

Query: 70  AQELARMANYNTPQLHAY-GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            +E+A+ +      L+A     G + D     V   P W     +    G         +
Sbjct: 64  LEEMAKFSEEVLSPLNAAGDEHGCKLDAKTKDVTTPPGWKEAYEQYKEGGWQSLSVAEEY 123

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  +  +  + L   A    G     S+ + + + L  +    + +  K+    + 
Sbjct: 124 GGQNLPLSLGLIKSELIATANWAWGMYPGLSIGAMNTLTLHGSEEQKQQYLTKLAEGTWL 183

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE + GTD+  + ++  K +DG Y ++G K F+S    D   
Sbjct: 184 GT-------------MCLTEPQCGTDLGQMKTKAVKQADGSYKITGTKIFISCGEHDFTE 230

Query: 242 --AFIMLAQVE------GRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVE 288
               I+LA+ E        +  F+VP+ L  EDGS      L    L+ K+G   ++T  
Sbjct: 231 NIVHIVLARTENAPPGTKGISLFIVPKYLQKEDGSLETKKNLVCGGLEKKMGIHGSSTCV 290

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------ 342
           + F ++ G+L+G+ N     +        + +A+  +    ++   A+ Y + R      
Sbjct: 291 MNFEDSKGWLIGEENKGLFQMFTFMNTARIGTALQGLGAAELAYQGALPYTKERMSMRAL 350

Query: 343 ------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEA 390
                   +G  +I    ++R +         A ++ +  +   D        +   +  
Sbjct: 351 SGTREPEKAGDAIIHHGDVRRMLLTCKAFAEGARSMMYETSMLADYMLTAKTPEEHKKVD 410

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                + PI K +  ++     ++ ++C GG GY+++  + ++ R++   ++  G+    
Sbjct: 411 DEMGFLTPILKGFITEIGVEAASQGLQCFGGHGYLQDWGMEQNMRDARIGTLYEGTTGIQ 470

Query: 451 VLDVLN---LLEKGTNLF 465
            LD+L    LL+ G N  
Sbjct: 471 ALDLLGRKILLQGGKNWL 488


>gi|325280801|ref|YP_004253343.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324312610|gb|ADY33163.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 569

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/497 (18%), Positives = 184/497 (37%), Gaps = 57/497 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE      A   A   +   PQ+            V++       +      GL+ 
Sbjct: 55  LEIVGEICGDVVA-VNAESVDAEGPQVVD--------GHVKYAAGTQQNIDVINQAGLNG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +       I AA +   A     ++       A  +    +      + P+
Sbjct: 106 ISLPRKYNGLNFPITPFIMAAEIVARADAGLQNIW-GLQDCAETINEFASDEQKAKYLPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           + + E                 + LTE   G+D+ A+  +     +DG + L+G K F++
Sbjct: 165 VCAGE--------------TCAMDLTEPDAGSDLQAVQLKATYNEADGQWYLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +      ++LA+ E G      +   + D + N +  +R++NK+G + + T EL F N  
Sbjct: 211 NGDGHISLVLARSEAGTNDGRGLSMFIYDRNSNAVTVRRIENKLGIKGSPTCELVFKNAP 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L+G+  +     V  +     L     SV     +  E + YA+ R   G  +I+ P 
Sbjct: 271 AELVGERKMGLIKYVMALMNAARLGIGAQSVGIAEAAYREGLKYAQERKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAY--------------ARIMA 397
           +   ++++   +    ++ +  A   D  K+    S+E A               A I  
Sbjct: 331 IYEMLSNMEAKLHGIRSVLYETARFVDMYKTYYHISKERALDKDERNEMKEYQKLADIYT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K +  + A  +  +A++  GGSG++++  I R+ R++   +I  G+    V+  +  
Sbjct: 391 PLQKLFASEYANEITYDALQIHGGSGFMKDYPIQRYVRDARITNIYEGTSQLQVVAAIRG 450

Query: 458 LEKGTNL--FEQLFSTLE-----QDLGSSGKKVITILRDSISLCKED------KGLARFL 504
           +  G       +++  +E     + L  + K +   L  + +   E          AR L
Sbjct: 451 VTTGQYAKHIREVYEKMEIAPEHEYLRETLKCMTGKLEAATAKVAEAGSTEYTDFHARRL 510

Query: 505 TEKIALASSAAALYRAG 521
            E          L +  
Sbjct: 511 VEMAGYTIIGYLLLQDA 527


>gi|58387602|ref|XP_315683.2| AGAP005662-PA [Anopheles gambiae str. PEST]
 gi|55238468|gb|EAA11811.3| AGAP005662-PA [Anopheles gambiae str. PEST]
          Length = 419

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 66/433 (15%), Positives = 144/433 (33%), Gaps = 49/433 (11%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
               AL +     +  ++   G  + L+   +E+  +          P    +   G   
Sbjct: 13  PACRALSSKAAPAL--DVSSTGPCFALTDEQREIVDLTKKFVREEIIPVAAHHDKTG--- 67

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+     A+++++   GL  S                   A  +          +  
Sbjct: 68  ---EYP---WAIIKKAWELGLTNSHIPADIGGTEMSIVTSCLVAEQFAYGCTGIMTAIEA 121

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V +       K +  ++              +  +     +TE   G+D+  +
Sbjct: 122 SGLGQTPVIIAGNKEQQKKYLGRLL-------------EEPLVAAYCVTEPGAGSDVNGV 168

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 169 RTRAEKKGDEYILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERDTPGLT 228

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 229 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLVGEGAGFKIAMGTFDKTRPPVAAGAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L EA+ Y+  R   G  +     +   +AD+A+ +  A  ++ + A   D+ + 
Sbjct: 286 GLAQRCLDEALKYSLERKAFGVPIAAHQAVSFMLADMAIGVETARLITMKSAWEVDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G
Sbjct: 346 NS-------YYASIAKCYASDIANKIATDAVQVFGGNGFNSEYPVEKLMRDAKIYQIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +     L +   +
Sbjct: 399 TSQIQRLIISRNM 411


>gi|295401420|ref|ZP_06811391.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976635|gb|EFG52242.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 594

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/447 (19%), Positives = 163/447 (36%), Gaps = 60/447 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     +  +   +            A   +    +     +  + L
Sbjct: 66  QLLRKAGELGLLSADIPEEYGGLGLDKISSALIGEKMSRAGGFSISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKRKYLPSLATGE-------------KIAAYALTEPGSGSDALGAKTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D FI+ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYILNGEKQWITNAGFADVFIVYAKVDGEH----FSAFIVERGFPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V G + +L   + YA
Sbjct: 229 SSSTRTLILQDVPVPKENLLGEIGKGHVIAFNILNIGRYKLGVGAVGGAKRALEITLQYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +   A +A  + A  +  +R    FDE             K  +
Sbjct: 289 NQRQQFKQPISKFSLTQEKFATMASRLYATESSVYRTVGLFDERMGLLDEEKAKDGKEIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K++  +    ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKFFATETLDYIVDEGVQIHGGYGFMQEYEIERAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L LL+K   L E+L     +++G               + +
Sbjct: 409 EINRLLVPGMYLKKAMKGELPLLQKAQQLQEELIMLAPEEVGD-------------GVLE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAGM 522
           ++K L     +KIAL ++  A  R G 
Sbjct: 456 QEKYLV-CNAKKIALMAAGLAAQRFGP 481


>gi|228952672|ref|ZP_04114746.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228806948|gb|EEM53493.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 569

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 139/374 (37%), Gaps = 30/374 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFE 466
            V  +L K     E
Sbjct: 404 TVAKMLMKQIEQLE 417


>gi|222084817|ref|YP_002543346.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221722265|gb|ACM25421.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 598

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/527 (19%), Positives = 178/527 (33%), Gaps = 84/527 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           +D+LF LN        N             N P             ++     E A++A 
Sbjct: 9   TDTLFVLNDVLGLERYN-------------NLPGFAEAS-----PDMIEAIVGEAAKLAE 50

Query: 79  YNTPQLHAY-GPGG-ERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
                L+      G  R D   V     +    +     G         F        + 
Sbjct: 51  EVLFPLNYSGDQEGCVRHDDATVSTPKGFKQGYQAYCEGGWIGLAVPEEFGGQGLP--YT 108

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           + AA     +      +M P +T  ++ A+    +    + + PK+    +  T      
Sbjct: 109 LHAAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSDEQKRTYLPKMVEGTWSGT------ 162

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLA 247
                  + LTE   GTD+  + ++     DG Y +SG K F+S+   D       ++LA
Sbjct: 163 -------MNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHDMTDNIVHLVLA 215

Query: 248 QVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           ++EG       +  F+VP+ +       G+ N +    +++K+G   NAT  + +    G
Sbjct: 216 RIEGAPEGTKGISLFIVPKFMVKEDGSLGARNPVSCGAIEHKMGIHGNATCVMNYDEATG 275

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------- 347
           FL+G  N     +  M     L   +  +S   ++   A  YAR R              
Sbjct: 276 FLIGAENRGLNAMFVMMNEARLGVGLQGLSIAEIAYQNAAAYARDRIQGRSLSGPKAPDK 335

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAP 398
               +I  P ++R +  I     A  A     A   D A    +E           +  P
Sbjct: 336 KADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRSQDEKERQAADDILGLATP 395

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           I K             A +  GG GYIEE  ++++ R++    I  G+     LD++   
Sbjct: 396 ILKGVLTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRK 455

Query: 457 LLEKGTNLFEQLFSTL---------EQDLGSSGKKVITILRDSISLC 494
           L   G      LF  +         ++ LG   K +   L D+ +  
Sbjct: 456 LALNGGRAVMALFKEIGDFCEENRNDEQLGFFTKHLKKGLNDAQAAT 502


>gi|154495110|ref|ZP_02034115.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC
           43184]
 gi|154085660|gb|EDN84705.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC
           43184]
          Length = 568

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 89/458 (19%), Positives = 171/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKRQGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   ++ +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L   + F T+      + L     ++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETIPCSPEMEPLKGRLVEMANKFEA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
            ++  KE +       +AR L E  A    A  L +  
Sbjct: 489 CMNKVKEAQNQELQDFVARRLYEMAADCIMAHLLIQDA 526


>gi|170740607|ref|YP_001769262.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194881|gb|ACA16828.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 592

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 176/489 (35%), Gaps = 60/489 (12%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALL 107
              +H +L      +     +E  R AN     L+      G   R   V   P +    
Sbjct: 25  AEGLHGDLT---ADLAEAILEEAGRFANDVVAPLNQVGDRQGAVLRDGAVTMPPGFREAY 81

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--M 165
           R     G +      ++          + AA + +         + P +T+  + AL   
Sbjct: 82  RAWSEAGWNALPGPEAYGGQGLPL--LLNAACVEMWNAASMSFGLGPLLTAGGVEALAAH 139

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +  +   +  K+ +  +                + LTE + G+D++ + ++ +   DG 
Sbjct: 140 GSEELRARYLEKLVTGTW-------------TATMNLTEPQAGSDLSGLRTKAEPAGDGT 186

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQR 274
           Y + G K +++    D       ++LA++         +  FLVP++L DG  N L    
Sbjct: 187 YRIRGEKIYITWGEHDLTDNIIHLVLARLPDAPAGTRGISLFLVPKVLPDGRRNDLRCAG 246

Query: 275 LKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L++K+G   + T  + +       G+L+G+ N     +  M     L   +  V     +
Sbjct: 247 LEHKLGIHGSPTCTMVYGEGEGAVGWLVGEANRGLACMFTMMNNARLCVGLQGVGIAERA 306

Query: 332 LAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
             +A+ YAR R              +I  P ++R +  +     A+  + +  A + D A
Sbjct: 307 TQQALAYARDRRQGRAAGGTEGMSPIIGHPDVQRMLLTMKALTGASRGICYLTAEALDRA 366

Query: 384 KSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                EA        A ++ P+ K +   +   V +  ++  GG G++EE   A+H R++
Sbjct: 367 HRAPSEAERREALDRASLLTPVAKAFSTDIGIEVASLGIQVHGGMGFVEETGAAQHLRDA 426

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE-------QDLGSSGKKVITILR 488
              +I  G+       L    L  +   +     + +        ++ G +       LR
Sbjct: 427 RIAAIYEGTNGIQAIDLVTRKLPLREGEIVRAQIARMRGLAERALREGGPAFGLTAPRLR 486

Query: 489 DSISLCKED 497
           +++      
Sbjct: 487 EAVESLDRA 495


>gi|109109376|ref|XP_001083487.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Macaca
           mulatta]
          Length = 415

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 136/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYMSIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKKQGDH-YILNGSKAFISGGGESDIYVVMCRT-GGPGPKGISCVVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    L   +GD                ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPLANRIGDEGQGFLIAVKGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 285 LGAAHASVILTRDHLKVRKQFGEPLASNQYLQFTLADMATRLVAARLMIRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERKEAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRMLISRSLLQ 414


>gi|85717536|ref|ZP_01048481.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85695653|gb|EAQ33566.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 593

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/514 (19%), Positives = 192/514 (37%), Gaps = 66/514 (12%)

Query: 46  LIANFPSVVHKELEL--LGEY---VLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           L  +  + +   +E    G++   + +   +E  R A+     L+      G R    +V
Sbjct: 12  LALHHGAGLKSAVEAGHYGDFDIEITAAILEEAGRFASDVLAPLNRAGDLHGARLQDGRV 71

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P W    RR    G +     + F       A       ++  A +  G     +++
Sbjct: 72  TTAPGWADAYRRWTAAGWNAVSGPQDFGGQGLPLAINAACTEIWSAANIAFGLCPLLTLS 131

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +       + K +  K+ S E+  T             + LTE + G+D+ A+ S+
Sbjct: 132 AIEALHTHGNDTLKKIYLEKLVSGEWTGT-------------MQLTEPQAGSDVGALRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            ++ +DG Y + G K F++    D        +LA++         +  FL+P+ + D  
Sbjct: 179 AERATDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGTRGISLFLIPKFVVDAD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     +  M     L
Sbjct: 239 GSLGARNDIHASGIEHKLGIHASPTCTMTMGDDGGAIGYLIGEENRGMRCMFTMMNQARL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAAT 370
              +  V     +  +A+ YA  R              +I  P ++R +  +    AAA 
Sbjct: 299 AVGLEGVGIADRACQQALAYALERRQGRAAGTSDGMSPIIAHPDVRRMLMQMRALTAAAR 358

Query: 371 ALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A+ +  A S D A   ++    A        + PI K +   +   V +  ++  GG G+
Sbjct: 359 AICYATAVSLDVATRAADPDVRAAAAARGALLTPIAKAFSTDIGNEVASLGIQVHGGMGF 418

Query: 425 IEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL------ 476
           IEE   A+HYR+    SI  G+       L    L   G      L   +   +      
Sbjct: 419 IEETGAAQHYRDVRITSIYEGTNGIQAIDLVTRKLAADGGAAVSALLDDMSATVHRVEAL 478

Query: 477 -GSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             ++       LRD++   +      ++L E++A
Sbjct: 479 NEAAFGTTGMKLRDALGSLERA---GKWLLERLA 509


>gi|73538087|ref|YP_298454.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121424|gb|AAZ63610.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 377

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 66/381 (17%), Positives = 127/381 (33%), Gaps = 32/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
                G   WD+    P    ++      GL   I    +            A       
Sbjct: 22  ERLAAGAAEWDRAGRLPE--EVVAEMGALGLLGMIVPEEWGGTYTDYVAYALAIEEIAAG 79

Query: 145 QLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 LMS   +     +    T    + +  ++ S E             +     LT
Sbjct: 80  CAACATLMSVHNSVGCGPILHYGTEAQKQRYLARLASGE-------------LIGAFCLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E + G++   + ++ +    G       ++  +   +   ++ A  E   G   +   L 
Sbjct: 127 EPQAGSEAHNLRTRARPSERGWVLNGSKQFVTNGQRAGVAVVFAATEPERGKKGISAFLV 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
                G      + K+G R++ T  +   +          +   P E ++I +       
Sbjct: 187 PTDTPGFIVHAPEKKLGIRASDTCAITLEDCEVPADA---LLGEPGEGLRIALSNLEGGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ AA  L  R A
Sbjct: 244 IGIAAQAIGIARSAFEAACRYASERVQFGRPLREHPPIANMLADMATELNAARLLVHRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               +      E       A   K +  ++A  V ++A++  GG GY+E+  + RHYR++
Sbjct: 304 RMRTQGLPCLSE-------ASQAKLYASELAERVCSKALQIHGGYGYLEDYPVERHYRDA 356

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+     + +   L
Sbjct: 357 RITQIYEGTSEIQRMLIARSL 377


>gi|295707065|ref|YP_003600140.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294804724|gb|ADF41790.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 594

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 144/403 (35%), Gaps = 46/403 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL  +     +  +   +      A     A   +    +     +  + L
Sbjct: 66  KLLKQAGELGLLGADVPEEYGGLGLDKITSALIAEKMSRAGGFSITHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P +   E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQAYLPALAVGE-------------KIAAYALTEPGSGSDALGARTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+++G          + +    G+     + K+G +
Sbjct: 173 THYVLNGEKQWITNAGFADVFVVYAKIDGDK----FSAFIVEREFPGVSVGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V   + +L     Y 
Sbjct: 229 SSSTRTLILEDALVPKENVLGEIGKGHVIAFNILNIGRYKLGVGAVGAGKRALEITSQYV 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +  +A +A  + A  +  +R    F++             K  +
Sbjct: 289 NQRQQFKTPIAKFSLTQEKLATMASKLYATESSVYRTVGLFEDHMGQLSEEQQKDGKQIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A   I   + K +  +    ++ E ++  GG G++ E  I R YR+S  N I  G+ 
Sbjct: 349 ASIAEYAIECSLNKVFATESLDYIVDEGVQLHGGYGFMSEYEIERLYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGS 478
               L V            L LL+K   L E+L   + Q++G+
Sbjct: 409 EINRLLVPGTYLRKALKGELPLLQKAQTLQEELMMLMPQEVGN 451


>gi|119383188|ref|YP_914244.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119372955|gb|ABL68548.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 563

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/482 (19%), Positives = 181/482 (37%), Gaps = 44/482 (9%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           A F     + +  +         + +A   R  +    +L           K+   P + 
Sbjct: 27  ARFAEATAETMTAVLAEAGKLATEVIAPANRAGDLTPARLEN--------GKLRSSPGYA 78

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              R     G      D     +   QA  +    +     L        +      +  
Sbjct: 79  QAFRALAEGGWIGIAADPEHGGMGLPQALNMAVNEMIASGCLALQLNPLLTQGQIEALEH 138

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  +   + PK+ S E+  T             + LTE + G+D+ A+T++ ++  DG
Sbjct: 139 HGSDELKALYLPKLISGEWSGT-------------MNLTEPQAGSDVGALTTKAERAEDG 185

Query: 225 IYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPN 268
            Y ++G K F++   SD       ++LA++         +  F+VP+ + D     G  N
Sbjct: 186 SYRVTGQKIFITWGDSDVTENVCHLVLARLPDGAAGTRGISLFMVPKFIPDEAGRPGIAN 245

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            L    L++K+G   + T  + F    G+L+G+ +     +  M     L   +  V+  
Sbjct: 246 DLRVVSLEHKLGIHGSPTCVMSFEGAKGWLVGEEHKGMAAMFTMMNAARLGVGVQGVAQA 305

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS- 387
             +L +A+ YA  R   G  +I  P ++R +A+   ++ AA A+    A + D A++   
Sbjct: 306 EAALQQAVAYAAERVQMG-PIIRHPDVRRMLAESRAEVFAARAICLGCAVALDMARATGS 364

Query: 388 -EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E AA A  + PI K     +   V   A++  GG GYIEE   A++ R+    +I  G+
Sbjct: 365 EEWAARAAFLTPIAKAHGTDVGIRVADTAVQVHGGMGYIEETGAAQYLRDVRITAIYEGT 424

Query: 447 GNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
                +D++   L  G      L   +     ++      +        +  +   + L 
Sbjct: 425 NGIQAMDLVGRKLADGGAAAMALLDEVLDGAKAAQSAEPELANQLWQAAETLREATQELL 484

Query: 506 EK 507
           E+
Sbjct: 485 EQ 486


>gi|163761301|ref|ZP_02168376.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281458|gb|EDQ31754.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 598

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 97/538 (18%), Positives = 183/538 (34%), Gaps = 82/538 (15%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            ++    QE AR++      L+      G        V     +    ++    G     
Sbjct: 36  DIVEAILQEGARLSEEVMLPLNQVGDTEGCTRHDDGTVTTPKGFKEAYKQYCEGGWLGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F       A  +        A L        +  + + +    +      + PK+ 
Sbjct: 96  APAEFGGQGLPYALHVAVGEYMSSANLSFMMYPGLTQGAIAAIHEHGSDEQKAKYLPKMV 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
              +  T             + LTE   GTD+  + ++     DG Y +SG K F+S+  
Sbjct: 156 EGIWTGT-------------MNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIFISAGE 202

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++EG       +  F+VP+ +       G  N +    L+ K+G   
Sbjct: 203 HDMSDNIIHLVLARIEGAPEGVKGISLFIVPKFMVGDDGSLGDRNPVSCGSLEEKMGIHG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + +    G+L+G  N     +  M     L   +   +   ++   A+ YAR R 
Sbjct: 263 NATCVMNYDEATGYLIGAENAGLKAMFVMMNEARLGVGLQGQAMGEIAYQNAVVYARERL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------ 385
                            +I  P ++R +  I     A  A     A   D A        
Sbjct: 323 QGRSLSGPKAPEKKADPIIVHPDVRRTLMTIRAFNEAGRAFMLWTALKSDIAHRSEVESE 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + E      ++ P+ K             A +  GG GYIEE  ++++ R++    I  G
Sbjct: 383 KQEADDLLTLVTPVVKGVLTDKGFDHAVMAQQMFGGHGYIEEWGMSQYVRDARIAMIYEG 442

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFL 504
           +     LD++                  + LG + G+ V+   ++    C+E++G     
Sbjct: 443 ANGIQALDLVG-----------------RKLGQNGGRAVMAFFKEIGDFCEENRGN---- 481

Query: 505 TEKIALASSAAALYRAGMNDI--ADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            E++AL +      + G+ND+  + ++L     +             +  H+   + L
Sbjct: 482 -EELALYTKG---LKKGLNDLQASTMWL---MQNAMAKPDNAGAASTDYMHLFGLVSL 532


>gi|15596732|ref|NP_250226.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107100966|ref|ZP_01364884.1| hypothetical protein PaerPA_01001996 [Pseudomonas aeruginosa PACS2]
 gi|218892509|ref|YP_002441376.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254234637|ref|ZP_04927960.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719]
 gi|254239883|ref|ZP_04933205.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192]
 gi|9947494|gb|AAG04924.1|AE004582_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126166568|gb|EAZ52079.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719]
 gi|126193261|gb|EAZ57324.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192]
 gi|218772735|emb|CAW28520.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 382

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 79/365 (21%), Positives = 146/365 (40%), Gaps = 24/365 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++ E  P    L  ++   G+    +  ++            AA   LM     
Sbjct: 29  PYIDEWEEAEEFP--RELYLKAGAAGILGIGYPEAYGGSCEGDLFAKVAASEELM----- 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               S  + +      +  P V K   P     E        + +    + L +TE  GG
Sbjct: 82  -RCGSGGLVAGLGSLDIGLPPVVKWARP-----EVRERVVPAVLRGEKIMALAVTEPSGG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + ++  +  D  Y +SG K F++S +   +  +A   G  G   +  LL +    
Sbjct: 136 SDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAGISLLLVEKGTA 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   K+G  ++ T EL F +       L+G  N     +        L  A+M+ 
Sbjct: 195 GFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQSERLALAVMAN 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +++L E++ +AR R   G  +    V++  +A++A  +  +   ++R A      KS
Sbjct: 255 MTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTYRQAAKMAAGKS 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   SI  G
Sbjct: 315 VIKE-------ISMAKNFATDVADRLTYDAVQVLGGMGYMRESLVERLYRDNRILSIGGG 367

Query: 446 SGNAM 450
           S   M
Sbjct: 368 SREIM 372


>gi|319763240|ref|YP_004127177.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117801|gb|ADV00290.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 388

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 138/406 (33%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +     RWD     P     + ++   G       
Sbjct: 2   DFELSEDQRAFADTARQFAQAELAPH---AARWDAEGIFPV--EAIAKAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+       V  +W   + S 
Sbjct: 57  ESVGGLQLPRLDATLVFEELAAVDPSTTAFITIHNMATWMLGTWAQDAVRAEWGEALTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A+I ++ + +        G  +   +  + 
Sbjct: 117 -------------RKLASYCLTEPGSGSDAASIKTRAELVGGEYVINGGKAFISGAGSTH 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  + + G   +          G+ Y + + K+G  S  T ++ F N       
Sbjct: 164 VLVLMARTGDAQSGAAGISAFAVPADLPGIHYGKKEEKMGWNSQPTRQISFDNVRIPAQN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +LA A  Y + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V+ EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFNVVNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 338 LHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIGRRMLDGDA 383


>gi|218295460|ref|ZP_03496273.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244092|gb|EED10618.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 577

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 85/428 (19%), Positives = 161/428 (37%), Gaps = 35/428 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+R++   GL       ++  +   +      A         +    + +      +   
Sbjct: 65  LMRKAGELGLLAIDVPEAYGGLDLPKVISTVVAEELSGTGGFSVTYGAHTSIGTLPLVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ S E+                  LTE   G+D  A  ++     DG 
Sbjct: 125 GTEEQKRKYLPKLASGEW-------------IAAYCLTEPGSGSDALAAKTRATLSEDGK 171

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  ++  +  F + A+V+G          L +    GL +   + K+G ++
Sbjct: 172 HYILNGVKQWISNAGFAQLFTVFAKVDGEH----FTAFLVERDTPGLSFGPEEKKMGIKA 227

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +    +   LG++        ++  +        +V G + +L  +  YA 
Sbjct: 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAA 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--EAAYARIM-- 396
           +R   G  +    +++  + ++A  I AA +  +R     DEA    E  EA  A I   
Sbjct: 288 QRVQFGRPIGRFGLIQEKLGEMASRIYAAESAVYRTVGLIDEALLGKEGAEAVMAGIEEY 347

Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++   V+ E ++  GG GY +E  I R YR++  N I  G+     L 
Sbjct: 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLL 407

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           +  +L     L   L   L     ++ K    +L  S    ++ +       +K+ L  +
Sbjct: 408 IPGML-----LRRALKGQLP-LFQAAMKLQKELLEPSFEEPEDLELYQIAGLKKLFLMVA 461

Query: 514 AAALYRAG 521
             A  R G
Sbjct: 462 GLAAQRYG 469


>gi|148658235|ref|YP_001278440.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148570345|gb|ABQ92490.1| butyryl-CoA dehydrogenase [Roseiflexus sp. RS-1]
          Length = 394

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 142/405 (35%), Gaps = 34/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS    E+ R       +         R + +EF      L+++    GL       
Sbjct: 17  DFALSDQH-EMLRQTVRAFAEQEIRPTAAARDEAMEFP---VDLVKKMGQLGLMGVAVSE 72

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +                        G + S  +      +    T    ++    + S 
Sbjct: 73  QYGGAGLDYISYAIVIEELSRVDASLGVIASVNNSLVCYGIETFGTEEQKRELLTPLASG 132

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                         +     L+E   G+D AA  +   +  D         W  +   +D
Sbjct: 133 -------------RMLGAFSLSEPGAGSDAAAQKTTAVRDGDEYVINGIKNWVTNGDYAD 179

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             I++A  +   G   +   L D    G    ++++K+G RS  + ++ + N   + +  
Sbjct: 180 TIILMAMTDPSRGHRGITAFLVDPHAPGCSIVKVEHKLGIRSAHSCQMAYDN---YRVPA 236

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
                   +  KI +  L++  + ++   V +A+     A+ YA+ R   G  +I+   +
Sbjct: 237 WRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAI 296

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  I AA  L++  A   D+       A+ A       K +  + A     +A
Sbjct: 297 GFTLADMATRIKAARLLTYEAAWRKDQHLDFVSAASMA-------KLYASETAMWTATKA 349

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  G +GY +E  + R++R++    I  G+     L +   + +
Sbjct: 350 VQVFGSNGYSKEYPVERYFRDAKITEIYEGTSEIQRLVIAREIAR 394


>gi|326780257|ref|ZP_08239522.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326660590|gb|EGE45436.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 383

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 139/397 (35%), Gaps = 35/397 (8%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              ++LA    A    P + A+    E  DK        +++++  + G         + 
Sbjct: 10  EAVRKLAEEFVAREVAPHVVAWDR-AENVDK--------SIVKKLGNLGFLGLTVPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  +A        + W P++ S E  
Sbjct: 61  GSGGDHLSYCLVTEELGRGDSSVRGIVSVSLGLVAKTIASWGDEDQKRTWLPRLTSGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D   + ++ ++            +  +   +D  +
Sbjct: 119 -----------AIGCFGLTEPGTGSDAGNLATRAERDGGDYVVNGTKMFITNGTWADVVL 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+     G   V   L      GL  + +  K+G R  AT EL            L  
Sbjct: 168 LFARTNDAPGHRGVSAFLVPTDTPGLTRRTVHGKLGLRGQATAELVLQGVRVPAGALLGP 227

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  ++D
Sbjct: 228 EGKGFSIAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKAIARHQLVQELLSD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           IA+D+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++  GG
Sbjct: 288 IAVDVDAARLLTWRVADLIDRGQEFATAASKA-------KLYASEAAVRCANNALQVFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 341 YGYIDEYPVGKLLRDARVMTLYEGTSQIQKLIIGRAL 377


>gi|82617161|emb|CAI64068.1| acyl-CoA dehydrogenase [uncultured archaeon]
 gi|268323006|emb|CBH36594.1| probable acyl-CoA dehydrogenase [uncultured archaeon]
          Length = 428

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 135/371 (36%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P    L++R     L+   + R +       A  +        A    
Sbjct: 76  PRAAEIDKKGKFP--RDLVKRMAELKLYGIPFPREYGGASATMASYVAVVEELSRASASI 133

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L S  + +   +    T    + +               P+ + +      LTE   G
Sbjct: 134 GFLSSAGLITIFPIHYAGTEEQKQKYL-------------RPLCEGTKLGAFALTEPSAG 180

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ +      D         +  ++ ++D +I+ A  +       +   + +    
Sbjct: 181 SDPTAMGTNAVHEGDEYLLNGRKAYITNTSVADIYIVFAYTDKGKKRAGMSAFIVEKGTK 240

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAI--MSV 325
           G  +  + + +G RS     L+F++        L     G    M  L     A+  + V
Sbjct: 241 GFSFAGINDMLGMRSCIVGGLKFNDCRVPEENLLGSEGDGFKIAMGTLDRDRIAMSSVGV 300

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  +  YA+ R  S   + +   ++  +AD+A+++ AA  L+++ A+  D+ + 
Sbjct: 301 GITQACLDISKKYAKERRQSSQPIANFQAVQFMLADMAVEVEAARLLTYKAAHLADKGEK 360

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++        A I K +  ++A      A++  GG G  +E    R+YR++   SI +G
Sbjct: 361 ITK-------YASIAKLYASEVAQRAATNAVQIHGGYGCTKECPAERYYRDAKILSIAVG 413

Query: 446 SGNAMVLDVLN 456
           +     L +  
Sbjct: 414 TSEIQRLVIAR 424


>gi|91777411|ref|YP_552619.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690071|gb|ABE33269.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 379

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 135/382 (35%), Gaps = 34/382 (8%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           TP+   +   G R D+            ++  +GL C      +        H       
Sbjct: 28  TPKQAEWDKAG-RVDR--------ETWLKAGREGLLCLTLPTEYGGGGGDFGHAAILNEE 78

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A L        S   A  +A +      + W PK  + E               + +
Sbjct: 79  VNRAGLSGLGFGVHSDVIAPYIARIGNEEQKQKWLPKTCTGE-------------SILAI 125

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
           G+TE   G+D+ AI +   +  D  Y ++G K F+S+ + +D  I++ + +   G   V 
Sbjct: 126 GMTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSAGSKGVS 184

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILI 316
            ++ + +  G    R  +K+G  S  T EL F N    +   LG+       +       
Sbjct: 185 LIVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLMGELPQE 244

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  AI + + +   L   I+Y + R      + D    K  +ADI     A   L    
Sbjct: 245 RLSIAIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKLADIKAQATAVRVLV--- 301

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D   +           A I K +  +     + + ++  GG GY+ E  +AR + +
Sbjct: 302 ----DHYLAEHVRRRLTLEEAAIAKLFATESLGKALDDMVQLHGGYGYMLEYPVARAFAD 357

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +  N I  G+   M   +   L
Sbjct: 358 ARVNRIYGGTSEVMRDLISRKL 379


>gi|332525157|ref|ZP_08401334.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108443|gb|EGJ09667.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 376

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 136/380 (35%), Gaps = 32/380 (8%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P    WD+    P     L      G +       ++       A  +    +    
Sbjct: 21  RIAPHAAEWDRAHTFP--REALAGLAELGCYGVAVPTEYDGAGLDYLALSLILEEIAAGC 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  +   +    S++         + W               P+ + ++     LTE
Sbjct: 79  GATSTIVSVNNCPVCSILMAWGDEAQKQQWL-------------RPLARGAMLGAFCLTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
            + G++ + + +  ++  D  Y + G K F++S  + D  I++A  +   G       L 
Sbjct: 126 PQVGSEASGLKTTARRDGDD-YVIDGVKQFITSGKNGDVAIVIAVTDKDAGKKGFSAFLV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             S  G    RL++K+G  ++ T ++ F          +      ++    L  L+   +
Sbjct: 185 PTSTPGYVVARLEDKMGQHASDTAQIVFEGCRVPAAHRIGAEGEGLK--VALSGLEGGRI 242

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   V +       A  YA+ R   G  + +   ++  +AD A  I AA  L    A 
Sbjct: 243 GIASQCVGMARAAFEAATAYAKERVAFGKPIFEHQAVQFRLADAATQIEAARQLVHHAAA 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +   +EAA A       K +  +MA  V + A++  GG GY+ +  + R YR+  
Sbjct: 303 LKDAGQPCLKEAAMA-------KLFASEMAERVCSTAIQTFGGYGYVNDFPVERLYRDVR 355

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+ +   + +   L
Sbjct: 356 VCQIYEGTSDVQRILIGRAL 375


>gi|332284306|ref|YP_004416217.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330428259|gb|AEC19593.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 384

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 148/408 (36%), Gaps = 32/408 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           E+ LS   Q  A+ A +Y   +L  +     RWD     P       R+   G       
Sbjct: 2   EFRLSDEQQAFAQAARDYAVGELEPH---AARWDAESIFP--REAFARAGELGFCAIYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    +  V   W P++ + 
Sbjct: 57  ESIGGLGLPRLDATLVFEEMAAYDPSTTAFLTIHNMATWMIGSWASESVRNAWGPQLAAG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMS 240
           E                   LTE   G+D A+++++  K     Y L+G K F+S    +
Sbjct: 117 E-------------KLASYCLTEPGAGSDAASLSTRADKKG-ASYVLNGAKAFISGAGDT 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  +++A+  G  G   +          G+ Y R ++K+G  S +T  + F N       
Sbjct: 163 DLLVVMART-GEAGARGISAFAVPADTPGITYGRKEDKMGWNSQSTRPITFDNVEVPAEN 221

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +   A  Y   R   G  L D   ++ 
Sbjct: 222 LLGQEGEGFKFAMKGLDGGRINIATCSVGAAQGAYDAARRYMGERKQFGHALADFQALQF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            + D+   I A+  +    A+  D+   +      A     + K     +      +A +
Sbjct: 282 KLVDMLTHIVASRQMVRLAASKLDDQDPQ------ASSYCAMAKRLATDLCFQACLDAQQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
             GG GY+++  + R  R++  + IL G+   M + V   LLEKG ++
Sbjct: 336 IHGGYGYLKDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLEKGADI 383


>gi|303317764|ref|XP_003068884.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240108565|gb|EER26739.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320038916|gb|EFW20851.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 438

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 77  EQIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIVGIEELARV 134

Query: 145 QLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T   + +    +  + K W P++               T+      L+
Sbjct: 135 DPSVSVMVDVHNTLVNTAILKYASAEIKKKWLPRL--------------ATNTVGSFCLS 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   L 
Sbjct: 181 EPVSGSDAFALQTKAVKTESGYKINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLV 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+   
Sbjct: 241 EKDTKGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGR 297

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    DIAAA AL +  
Sbjct: 298 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +    +AA A       K +  ++A  V + A+E +GG G++ E    + +R+
Sbjct: 358 ARKKEAGQDFVMDAAMA-------KLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRD 410

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 411 SKIGAIYEGTSNIQLQTIAKTLQK 434


>gi|134293268|ref|YP_001117004.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134136425|gb|ABO57539.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 596

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 98/527 (18%), Positives = 186/527 (35%), Gaps = 69/527 (13%)

Query: 68  CTAQELARMANYNTPQLHAY-GPGGERW-DKVEF-HPAWHALLRRSIHDGLHCSIWDRSF 124
              +E A+ +N     L+      G  W D V    P +    +     G         +
Sbjct: 39  AVIEEAAKFSNEVVAPLNVLGDKHGNTWKDGVVNACPGFSDAFKLFAAGGWQGVKHPVDY 98

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           E     +      A +   A +        +  +   +    +      + PK+ S E+ 
Sbjct: 99  EGQGLPKLIATPCAEMLNAASVAFALCPMLTDGAIEALLTAGSDEQKARYVPKMISGEWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + G+D++ + S+ +   DG Y + G K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLSMVRSRAEPQQDGSYKVFGTKIFITWGEHDMTE 205

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+  G       +  F+VP+ L +     G+ N +    +++K+G + + T  
Sbjct: 206 NIIHLVLARTPGAPEGVKGISLFVVPKFLVNEDGSLGARNDVQCVSIEHKLGIKGSPTAV 265

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +     G+L+G+ N     +  M         +  V     +  +A+ YA+ R  S
Sbjct: 266 LQFGDHGGATGYLVGEENRGLEYMFIMMNAARFAVGLQGVGISEAAYQKAVEYAKERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                       +I  P ++R +  +     A+ A+++  A   D A    + A  A   
Sbjct: 326 RPVDGSAKEAVTIIHHPDVRRMLGTMRALTDASRAIAYVAAAHNDIAHQHEDAATRAHHQ 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K W  +++  V +  ++  GG G+IEE   A+ YR+S   +I  G+    
Sbjct: 386 AIYEFLVPIVKGWSTELSLEVTSLGVQVHGGMGFIEETGAAQFYRDSRILTIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
             D +       G  + + L   + + +               S+ K  +  AR     +
Sbjct: 446 ANDFVGRKTFRDGGVVAKFLLGEIAKTVEELSAHDGAAF---ASMRKHLEQGARSFEHAM 502

Query: 509 ALASSAAALYRAGMNDIADVFLENRF--------LDNCHSTHCMLHG 547
                 A + R   N +   F+ +          L        ML  
Sbjct: 503 EFVI--ANMKRD-PNAV---FIGSVLYLQLAGVVLGGWQMARAMLIA 543


>gi|182439592|ref|YP_001827311.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468108|dbj|BAG22628.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 383

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 138/397 (34%), Gaps = 35/397 (8%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              ++LA    A    P + A+    E  DK        +++++    G         + 
Sbjct: 10  EAVRKLAEEFVAREVAPHVVAWDR-AENVDK--------SIVKKLGDLGFLGLTVPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  +A        + W P++ S E  
Sbjct: 61  GSGGDHLSYCLVTEELGRGDSSVRGIVSVSLGLVAKTIASWGDEDQKRTWLPRLTSGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D   + ++ ++            +  +   +D  +
Sbjct: 119 -----------AIGCFGLTEPGTGSDAGNLATRAERDGGDYVVNGTKMFITNGTWADVVL 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+     G   V   L      GL  + +  K+G R  AT EL            L  
Sbjct: 168 LFARTNDAPGHRGVSAFLVPTDTPGLTRRTVHGKLGLRGQATAELVLQGVRVPAGALLGP 227

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  ++D
Sbjct: 228 EGKGFSIAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKAIARHQLVQELLSD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           IA+D+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++  GG
Sbjct: 288 IAVDVDAARLLTWRVADLIDRGQEFATAASKA-------KLYASEAAVRCANNALQVFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 341 YGYIDEYPVGKLLRDARVMTLYEGTSQIQKLIIGRAL 377


>gi|157374597|ref|YP_001473197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316971|gb|ABV36069.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 389

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 134/361 (37%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +    +   AH +    +   +        + S    + + 
Sbjct: 47  ELWPVLGDMGLLGVTVSEEYGGADMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ + E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNAAQKAKYLPKLITGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVERDSKGFSTAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F +       + N+  G    +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFEDCEVP---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMTACMDIVIP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|254505266|ref|ZP_05117417.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222441337|gb|EEE48016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 620

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 87/454 (19%), Positives = 156/454 (34%), Gaps = 63/454 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGG-------ERWDKVEFHPAWHALLRRSIHDGLH 116
            ++    +E A+        L      G            V     +          G  
Sbjct: 58  DLVEAILKEGAKFTEE---VLQPINQSGDQEGCTRNDDGTVSVPKGFKEAYDAFCEGGWA 114

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
               D  +        H +        +       M P +T+ ++ AL    T    + +
Sbjct: 115 TLAADADYGGQGLP--HTLATIFNEFASSANMAFSMYPGLTAGAIAALTTHGTDEQKQTY 172

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + S ++  T             + LTE   GTD+  I ++    +DG Y +SG K F
Sbjct: 173 LPNMISGKWTGT-------------MNLTEPHCGTDLGLIRTKAVSQADGSYKISGTKIF 219

Query: 235 LSSPMSDA-----FIMLAQVEGRV-GCFLVPRLLED----------GSPNGLCYQRLKNK 278
           +S+   +       ++LA++EG   G   +   +            G+ NG+    +++K
Sbjct: 220 ISAGEHEMSDNIIHLVLARIEGAPEGNKGISLFVVPRNEIAEDGTSGARNGVSCGSIEHK 279

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   NAT  + + +  G+L+G+ N     +  M     L  A+  +S   V+   A+ Y
Sbjct: 280 MGIHGNATCVMNYDDATGWLVGEENKGLRAMFVMMNEARLGVAVQGLSQSEVAYQNAVTY 339

Query: 339 ARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           A+ R                  +I  P ++R +  I     AA AL    A   D     
Sbjct: 340 AKDRIQGRALTGPKSPDKAADPIIVHPDVRRTLMSIRAFNEAARALVIWTALHGDVSHRS 399

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K +        +M P+ K     +       A +  GG GYI E  + +  R++   
Sbjct: 400 EDDKDKQFSDDMMGLMTPVLKGVLTDIGFENAVNAQQMYGGHGYIGEWGMEQFVRDARIA 459

Query: 441 SILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
            I  G+     LD++   L   G       F+ +
Sbjct: 460 MIYEGANGIQALDLVGRKLPANGGRAVMSFFNEV 493


>gi|156402507|ref|XP_001639632.1| predicted protein [Nematostella vectensis]
 gi|156226761|gb|EDO47569.1| predicted protein [Nematostella vectensis]
          Length = 419

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 126/360 (35%), Gaps = 30/360 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRV 170
             GL       S             A           G +MS + +      L   T   
Sbjct: 83  ELGLLGVEVPESLGGTGLDAFAYAIAMEEISRGCASLGCIMSVNNSLYLGPILKYGTDAQ 142

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W               P           L+E   G+D  A  +      D       
Sbjct: 143 KEEWIK-------------PFLNGDRVGCFALSEPDNGSDAGAAKTTAVLDGDHYVLNGT 189

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +   S+A ++ A  +       +   L      GL     ++K+G R+ +T  L 
Sbjct: 190 KAWITNGYESEAAVVFATTDRSKKHKGISAFLVPKPTPGLTLGNKEDKLGIRATSTCYLV 249

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
           F +     +   N+   P    KI +  LD+  + ++G  + +A+     A+ YA +R  
Sbjct: 250 FEDCR---IPKENLLGEPGYGFKIAMQTLDAGRIGIAGQALGIAQAALDCAVDYADKRMA 306

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               +     ++  +ADIA  + AA  L+++ A   D   + ++EAA A++ A       
Sbjct: 307 FNQKISKLQTIQMKLADIATQLEAARLLTWKAAAIKDAGMNYTKEAAMAKLAASEAA--- 363

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
                    ++++ +GG GY+ +    RHYR++    I  G+     L +   L K   L
Sbjct: 364 ----TFAAHQSIQILGGMGYVTDMPAERHYRDARITEIYEGTSEIQKLVIAGRLLKEYGL 419


>gi|330897773|gb|EGH29192.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 383

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 142/397 (35%), Gaps = 37/397 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPYAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    +  L    +  A  ++   R +   A+ YAR R      +I+   +   +AD+
Sbjct: 230 GKGLSIALSNLEGGRIGIAAQALGIARGAFEAALAYARERVQFDKPIIEHQSIANLLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L+   A      ++   E       A   K +  +MA  V ++A++  GG 
Sbjct: 290 HTRINAARLLTLHAARLRSAGQACLSE-------ASQAKLFASEMAEWVCSKAIQIHGGY 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 343 GYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|254239110|ref|ZP_04932433.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719]
 gi|126171041|gb|EAZ56552.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719]
          Length = 387

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 80/410 (19%), Positives = 148/410 (36%), Gaps = 27/410 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   + LA  A       H   P    WD+    P    ++R +   G        
Sbjct: 2   DFDLTEEQRLLAESARAFAR--HELAPKAADWDRDHHFPV--EVIRAAAEQGYLGLYIAE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +              +     +S    +A M+A      + + W P +   E
Sbjct: 58  EDGGLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A + ++ ++  D  Y L G K F+S   S  
Sbjct: 118 -------------SLASYCLTEPDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQ 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +   L      G+ Y R ++K+G R+  T  + F          +
Sbjct: 164 VLIVMARTGEDGARGISCFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRI 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    L+ A  S+   + +L +++ Y   R   G  L     ++  +
Sbjct: 224 GPEGQGFVYAMKGLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ A+  +    A+  D         A A +   + K +       V  EA++  
Sbjct: 284 ADMLTELTASRQMVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           GG GY+ +  + R  R++  + IL G+   M + V   L +   + ++L 
Sbjct: 338 GGYGYLNDYPLERWVRDTRVHQILEGTNEIMRVIVARRLLEQGGMLDRLL 387


>gi|317509319|ref|ZP_07966939.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316252375|gb|EFV11825.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 386

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 69/404 (17%), Positives = 133/404 (32%), Gaps = 32/404 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            + LS   +EL R A     +     P     D+ E  P           +G        
Sbjct: 9   RFALSDEQEEL-RAAVRALAE-REIQPYATDVDERERFPI--EAREALAKNGFGAPHIPE 64

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +                       +  + + +      + L  +  + +   P I S E
Sbjct: 65  QYGGEGADAVSCCVVVEEVARVCASSSLIPAVNKLGTMGLILNGSEELKQKVLPAIASGE 124

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GL+E+  G+D A++ ++ ++  DG        W  +   S  
Sbjct: 125 -------------ALASYGLSERGAGSDAASMRTKARRDGDGWVIDGEKCWISNGSESTW 171

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           + ++A  +   G   +   +      G      + K+G + + TVEL F +     +   
Sbjct: 172 YTVMAVTDPDKGAHGISAFIVHRDDEGFSIGNKEKKMGIKGSPTVELLFDHCR---IPGD 228

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMK 356
            +   P    K  L  LD    ++    V +       A  YA+ R   G    D   + 
Sbjct: 229 RIIGEPGTGFKTALQSLDHTRPTIGAQAVGIAQGALDAAAAYAKERQQFGRPTTDFQGVS 288

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + I AA  + +  A   +         A +  ++   K +   +A  V   A+
Sbjct: 289 FMLADMEMKIQAARLMVYASAERAERG------GAGSTALSSAAKCFASDVAMEVTTNAV 342

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +GG+GY  +  + R  R++    I  G+     L +   L +
Sbjct: 343 QVLGGAGYTRDFPLERMMRDAKITQIYEGTNQIQRLVISRALLR 386


>gi|110835523|ref|YP_694382.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648634|emb|CAL18110.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 379

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 133/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P   +W+K E  P    L  +   +GL C      +                   A    
Sbjct: 24  PHYNQWEKAEIFP--RELWNKMGENGLLCVDVPEEYGGFGANFRLSAVIVEEASRAGFSS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A ++   S   A  +  +      K W PK+ + E                 +G+TE  
Sbjct: 82  LASNISVHSDIVAPYILHLGNEEQKKTWLPKMVTGE-------------AVGAIGMTEPG 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+  + ++  K  DG Y ++G K F+++      I+LA + +   G   +     D 
Sbjct: 129 AGSDLQGLKARADKDGDG-YSINGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTVDC 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
           + +G    R   K+G  +  T EL F N       +LG        + +      L  A+
Sbjct: 188 TLDGFARGRNLEKMGLHAADTSELFFENVKVGAEQILGGEGKGFANLMNELPRERLILAL 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+     +   I Y + R   G  +      +  +AD+   +    A   +    +D 
Sbjct: 248 GAVAACEGMIERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVINRAYCEQCIEQYDR 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++            A I K    ++   V  + ++  GG GY++E  I+R Y ++    I
Sbjct: 308 SE-------LTATNASIAKLTATELQGVVADKCLQLFGGYGYMQEYPISRDYVDARIQRI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 361 YGGTSEIMKEIISRDI 376


>gi|146308834|ref|YP_001189299.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577035|gb|ABP86567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 590

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 90/540 (16%), Positives = 180/540 (33%), Gaps = 63/540 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNT-----PQLHAYGPGGERW--DKVEFHPAW 103
              +   L  L E V + TA  +   A   T     P   +    G +W    V     +
Sbjct: 21  APSLWARLPALAETVDADTADAILEEAAKVTGSLIAPLNRSGDEEGAQWVDGDVRTPAGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G      + ++  +   +   +    +   A        + S  +   + 
Sbjct: 81  REAYATYTEGGWVGLSGNPNYGGMGMPKMLAVAFEEMLYAAGSSFALYSALSSGACLAID 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + P             PM +   A  + LTE   GTD+  I ++ +  +D
Sbjct: 141 AHASEDLKTTYLP-------------PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQAD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G Y ++G K F++    D       ++LA++         +  FLVP+++ +     G+ 
Sbjct: 188 GSYKVTGSKIFITGGEQDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNDDGSLGAR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G++N     +  M     L   I  +  
Sbjct: 248 NAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGC 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFR 375
              S   A+ YAR R  S               +I    ++R +  +        A +  
Sbjct: 308 AEASYQSAVSYARERIQSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACY 367

Query: 376 LANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           +    D AK       R    A   ++ P+ K +             +  GG GYI E  
Sbjct: 368 VGQQLDLAKYAEDASERQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD+L   ++  G          +     +        L
Sbjct: 428 QEQLVRDVRIAQIYEGTNGIQALDLLGRKVVANGGAALRLFAGEVRDFAHAHESPYRERL 487

Query: 488 RDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
            +++   +  + ++ +L E+         +A+  Y      +A  ++  R          
Sbjct: 488 IEAL---ERLEAVSGWLLEQAKSDPNSVGAASVEYLHLFGYVAYAYMWARMAAVAQGKQG 544


>gi|317418587|emb|CBN80625.1| 'Acyl-CoA dehydrogenase family member 9, mitochondrial '
           [Dicentrarchus labrax]
          Length = 630

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 169/461 (36%), Gaps = 49/461 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +        R A +  +    A  L +        + +       
Sbjct: 113 ELGLFGVMIPEEYGGLGLSNTMYARLAEITSLDGSIAVTLAAHQAIGLKGILIAGNEAQK 172

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + + PK+ S E+                  LTE   G+D A+I ++     DG  Y ++G
Sbjct: 173 QKYLPKLASGEH-------------IAAFCLTEPGSGSDAASIQTRATLSEDGKHYLING 219

Query: 231 HKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            K ++S+  M+D   + A+ E     V    +   + + +  G+   + ++K+G R + T
Sbjct: 220 SKIWISNGDMADIMTVFARTEVVVDGVKKDKISAFIVERAFGGITSGKPEDKLGIRGSNT 279

Query: 287 VELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYAR 340
            E+ F N    +   +  V  G    M I   L+S   S+           +     YA 
Sbjct: 280 CEVSFDNVPVPVENVIGEVGGGFKVAMNI---LNSGRFSMGSSSAGMIKKLIELTSEYAA 336

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L +  +++   A +A++     ++++  A   D  +    + +     A + 
Sbjct: 337 SRKQFNKSLAEFGMIQEKFALMAINAFVMESMAYLTAGMMD--RPGLPDCSL---EAAMV 391

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458
           K +  +     ++EA++ +GG GY +     R+ R+     I  G+   + + +    + 
Sbjct: 392 KVFSSEGGWICVSEALQVLGGLGYTKNYPYERYVRDCRILPIFEGTNEILRMYIALTGMQ 451

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-------------DKGLARFLT 505
             G  L  ++      ++G +   V   LR+S+    +                 A+ + 
Sbjct: 452 YAGKVLTGKVKEMKRGNIGLALSMVGKNLRNSLGGSVDLGLTGPDGVVHPSLAESAKKME 511

Query: 506 EKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           + ++L  S   + LYR G   + +  +  R  D   + + M
Sbjct: 512 QNVSLFGSTVQSLLYRYGKTIVDEQLVLKRVADVLINVYAM 552


>gi|307178143|gb|EFN66951.1| Isovaleryl-CoA dehydrogenase, mitochondrial [Camponotus floridanus]
          Length = 423

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 133/379 (35%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK        A  +     G         +         H I    L   +   
Sbjct: 63  PKAAEIDKKNNFDELRAFWKELAKLGFLGITVKPEYGGTGGTYLDHVIIMEELSRASAAI 122

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A      S    + +    T      + PK+ S E+                L ++E   
Sbjct: 123 ALSYGVHSNLCVNQIHRNGTKEQKHKYLPKLCSGEH-------------IGALAMSEPGY 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLED 264
           G+D+ ++  + +K +D  Y L+G+K W  + P +D  I+ A+           +   + +
Sbjct: 170 GSDVTSMKLRAEKKND-YYILNGNKFWITNGPDADILIVYARTNPNADKPQHGITAFIVE 228

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
            +  G    +  +K+G R + T EL F +       +LG++N     +     L  L  A
Sbjct: 229 SATEGFSTAQKLDKLGMRGSNTCELIFEDCKIPAANVLGEVNKGVYVLLSGLDLERLILA 288

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   + S   A  YA  R      L    +++  IAD+ + + A+ +  + +A   D
Sbjct: 289 AGPVGVHQASCDIAFEYAHSRKQFDQYLAQFQLIQGKIADMYMTLTASRSYLYSVARFCD 348

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +  ++             +C + A      AM+ +GG+GYI +    R  R++    
Sbjct: 349 AGHTNRKD-------CAAVLLFCTENAVKATMNAMQILGGNGYINDYVTGRLLRDAKLYD 401

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           +  G+     L +   + +
Sbjct: 402 VGAGTNEIRRLVISRAITQ 420


>gi|327480530|gb|AEA83840.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 383

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 141/405 (34%), Gaps = 41/405 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIW 120
           + ++   A++ AR             P  + W+K      W   AL+ +    GL   + 
Sbjct: 10  QRMIRDMARDFAR---------REIAPHAQAWEKA----GWIDDALVAQMGELGLLGMVV 56

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIF 179
              +            A           G LMS   +      L   +     +W  ++ 
Sbjct: 57  PEEWGGSYIDYVAYALAVEEISAGDGATGALMSIHNSVGCGPVLNYGSQAQKDEWLAELA 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S                     LTE + G++   + ++ +++ D  + L+G K F S+  
Sbjct: 117 SG-------------RAIGCFALTEPQAGSEAHNLRTRAERV-DSQWVLNGSKQFCSNAK 162

Query: 240 SDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                I+ A  +  +G   +   L      G   +R ++K+G R++ T  +  S+     
Sbjct: 163 RAKLAIVFAVTDPDLGKKGLSAFLVPTDTPGFAVERSEHKMGIRASDTCAVSLSDCRIPQ 222

Query: 299 LGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G    +  L    +     ++   R +   A+ YAR R   G  + +   +
Sbjct: 223 ANLLGERGKGLAIALSNLEGGRIGIGAQALGIARAAFEAALLYARERVQFGKPIAEHQSI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+   + AA  L    A           E       A   K +  +MA  V ++A
Sbjct: 283 ANMLADMQTQLNAARLLILHAARLKSAGLPCLSE-------ASQAKLFASEMAEKVCSQA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GY+E+  + R+YR++    I  GS     L +   L  
Sbjct: 336 VQIHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELAN 380


>gi|271962563|ref|YP_003336759.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270505738|gb|ACZ84016.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 381

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 128/387 (33%), Gaps = 36/387 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHK 134
           +A    P    +       D +     W      +   G+        +         + 
Sbjct: 21  LAREVAP---HHDQW--EKDGIVPREVWKK----AGEIGMFGFGVPEEYGGAGITDFRYN 71

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                  +            +   A     +T       W P   S E            
Sbjct: 72  AVIVEEVIRIGASGLGYSLHNDVMAPYFVDLTDDEQKARWLPGFVSGE------------ 119

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
            +   +G+TE   G+D+  I +   +  D  Y L+G K F+++ + SD  +++A+ +   
Sbjct: 120 -LITAVGMTEPGAGSDLQGIRTTAVREGDH-YVLNGQKTFITNGINSDLVVVVAKTDPAA 177

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVED 311
           G      L+ +    G    R   KIG  +  T EL F N               G  + 
Sbjct: 178 GARGTSLLVVERGMEGFSRGRNLEKIGMHAQDTAELFFDNVRVPAANLLGEEEGQGFFQL 237

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M  L    L  A+M+V+     L   I Y + R   G  +      +  +A++  ++  A
Sbjct: 238 MGNLPQERLSIAVMAVAAAETVLQTTIEYCKNRKAFGRNIGSFQNTRFVLAELDTEVEIA 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                +   + +  +    +AA A+        W  ++   VI   ++  GG GY+ E  
Sbjct: 298 RHYVDKCIRALNAKELSVVDAAKAKW-------WTTELQTKVIDRCLQLHGGYGYMMEYP 350

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456
           +A+ + +S   +I  G+   M   +  
Sbjct: 351 VAKAWVDSRVQTIYGGTTEIMKEIIGR 377


>gi|134095998|ref|YP_001101073.1| acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133739901|emb|CAL62952.1| putative butyryl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 596

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 94/470 (20%), Positives = 169/470 (35%), Gaps = 68/470 (14%)

Query: 88  GPGGERWDKVEF----HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G   D V         + A   + +  G      D  +          ++ +   ++
Sbjct: 62  DREGCTLDPVTHEVTPPAGFKAAYAQYVAAGWPSLSCDPEYGGQGLP--MVLQNSFFEML 119

Query: 144 AQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                   M P ++  +   L    T      + PK+ S E+  T             + 
Sbjct: 120 NSSNQAWTMYPGLSHGAYECLHEHGTAEQKALYLPKLVSGEWTGT-------------MC 166

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----- 251
           LTE   GTD+  + S+ +  +DG Y ++G K F+S+   D       ++LA++       
Sbjct: 167 LTEAHCGTDLGLLRSKAEPQADGSYKITGSKIFISAGEHDMVQNILHLVLARLPDAPQGT 226

Query: 252 -RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  F+VP+ L +     G+ N +    L+ K+G   NAT ++      G+++G  N  
Sbjct: 227 HGISLFIVPKFLPNADGTLGARNPIFCGALEEKMGIHGNATCQMNIDGATGWMIGQPNKG 286

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  M     L   + S+    V+   A+ YA+ R                  +I  P
Sbjct: 287 LNAMFVMMNAARLGVGMQSLGLTEVAYQNALLYAKDRLQMRSLTGVKAADKPADPIIVHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKM 407
            ++R +           A S  +A   D   +  +EA          ++ PI K +    
Sbjct: 347 DVRRMLLTAKAYAEGGRAFSSYVALQIDRELNHPDEAVRKDAADEVALLTPIIKAFLTDN 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                +EAM+  GG GYI E  + ++ R++  N I  G+     LD+L            
Sbjct: 407 GWIATSEAMQVYGGHGYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLG----------- 455

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
               +  D G+  +K    +R  I     D+ ++ F+T    LA     L
Sbjct: 456 --RKILLDNGAKLRKFGEKIRVFIEENGTDEAMSEFITPLADLAEKVTKL 503


>gi|206973583|ref|ZP_03234501.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|206747739|gb|EDZ59128.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
          Length = 569

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 141/374 (37%), Gaps = 30/374 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L  ++   GL        +    + K    + A ++           +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKVVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFE 466
            V  +L K     E
Sbjct: 404 TVAKMLMKQVEQIE 417


>gi|218263057|ref|ZP_03477302.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222990|gb|EEC95640.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii
           DSM 18315]
          Length = 568

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 89/458 (19%), Positives = 172/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWLLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKRQGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   ++ +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLE-----QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ L   + F T+      + L +   ++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETIPCSPEMEPLKARLVEMANKFEA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
            ++  KE +       +AR L E  A    A  L +  
Sbjct: 489 CMNKVKEAQNQELQDFVARRLYEMAAGCIMAHLLIQDA 526


>gi|313499828|gb|ADR61194.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 591

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/488 (18%), Positives = 172/488 (35%), Gaps = 49/488 (10%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            L    L    +E AR        L+      G +W   +V          R+ +  G  
Sbjct: 30  ELDRDTLDGILEEAARFTGQIIAPLNRNSDEQGCQWVGGEVTTPDGMRDAYRQYVEHGWA 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                +++      Q        + + A L        +  +   +    +  + + +  
Sbjct: 90  SMTGPQAYGGQGLPQMASASFHEMLMAASLSFRIYSGLTEGAVLALHRHGSEALKQAYLS 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S E+  T             + LTE + GTD+A + ++ Q  +DG Y ++G K F+S
Sbjct: 150 RMVSGEWAGT-------------MCLTEPQAGTDLALLRTRAQPEADGSYRITGSKIFIS 196

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
               D       ++LA++         +  FLVP+LL  G  N L    L++K+G +  +
Sbjct: 197 GGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGGERNALGCGALEHKMGIKGAS 256

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + F    G+L+G++N     +  M         +  +     +    + YAR R  S
Sbjct: 257 TCVMNFDGAQGWLVGEVNQGLACMFTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQS 316

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RS 387
                          +I  P ++R +            L    A   D   +      R 
Sbjct: 317 RSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQ 376

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             A  A ++ PI K +   +   V +  ++  GG GYI E  + +  R+S    +  G+ 
Sbjct: 377 AAARRAALLIPIVKAFFTDVGQEVASLGVQLYGGHGYIREWGMEQLMRDSRITQLYEGTN 436

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               LD++   +L  G      L   +   +G++    +  L+   +   +     R L 
Sbjct: 437 GIQALDLIRRKVLGDGGAELNMLIDEMALHVGAAS--ALDGLQAMATAVGQRLEEWRVLA 494

Query: 506 EKIALASS 513
             +  A  
Sbjct: 495 AHVVEACQ 502


>gi|254488050|ref|ZP_05101255.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044919|gb|EEB85557.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 393

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 137/380 (36%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+K E  P    L  +    G                +           MA
Sbjct: 35  EHIAPFARQWEKDETIP--KDLWPKIAELGFGGLYVSEDAGGSGLTRLDATLVFEALSMA 92

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +       + S              +  +   LTE
Sbjct: 93  CPSVAAFLSIHNMCAKMLDSFASDELKARIMDDVLSM-------------NTVLSYCLTE 139

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  + +DG Y L+G K F+S    SDA++ + +         V  +  
Sbjct: 140 PGSGSDAAALKTKCDRTNDG-YILNGTKSFISGGGYSDAYVAMVRTSDNGSA-GVSTVYV 197

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           +   +GL +  L++K+G RS  T +++F N     G L+G+                L+ 
Sbjct: 198 EDGTDGLSFGGLEDKMGWRSQPTAQVQFDNCTIPAGNLVGEEGKGFKYAMMGLDGGRLNI 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   
Sbjct: 258 AACSLGAAQTALTSTLDYMGDRKAFGQSIDQFQGLQWRLADMEIELQAARTFLRQAAWKL 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K +  +    ++ + ++  GG GY+ +  I +  R+   +
Sbjct: 318 DNGAPD------ATKFCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYGIEKLVRDLRVH 371

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M + V   + K
Sbjct: 372 QILEGTNEIMRVIVARDMLK 391


>gi|170046519|ref|XP_001850810.1| acyl-CoA dehydrogenase [Culex quinquefasciatus]
 gi|167869287|gb|EDS32670.1| acyl-CoA dehydrogenase [Culex quinquefasciatus]
          Length = 424

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 25/312 (8%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  ++ ++ M+ L  T    K + PK+ S                +    L+E   G+D 
Sbjct: 131 IHNTLVNSLMIKL-GTEEQKKKYLPKLCS--------------EYSGSFALSEPSAGSDA 175

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             + +  +K  +         W  +S MS  F+++A      G   +   + D    G  
Sbjct: 176 FGLKTTAKKDGNHYILNGSKMWISNSDMSGMFLIMANANPSAGYRGITTFIVDRDMEGFT 235

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             + ++K+G  ++ T +L   N        LG+                +      +   
Sbjct: 236 VGKREHKLGICASGTCQLHLDNVRVPEENILGEFGKGYQYAAGFLNEGRIGIGAQMIGCA 295

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  L   I Y   R   G  +     M+  +A IA +I AA  L +  A   +      +
Sbjct: 296 QGCLDATIPYLLERKQFGSDIYSFQSMQHQVATIATEIEAARLLVYNAARLQEAKVPFLK 355

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA A       K +  ++A     + ++ +GG G+ ++    + YR+    +I  G+ N
Sbjct: 356 QAAMA-------KLYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEGTSN 408

Query: 449 AMVLDVLNLLEK 460
             +  +  +++K
Sbjct: 409 MQLSTIAKVMKK 420


>gi|91225739|ref|ZP_01260768.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91189628|gb|EAS75903.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 389

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 139/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L       GL     D           AH +    +   
Sbjct: 29  EHIAPIAAEIDRDNQFP--NHLWPLLGEMGLLGVTVDEELGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPSQREKYLPKLIDGTH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNAGSDVISMQLKAENKGDHFVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + +  G  + +  +K+G R + T EL F++       +LG+LN     +        +  
Sbjct: 194 ERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  IAD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHEREQFGKPIGEFQLVQGKIADMYSRMSAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGNATRKDAAGA-------ILYSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|262396838|ref|YP_003288691.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262340432|gb|ACY54226.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 335

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 135/349 (38%), Gaps = 24/349 (6%)

Query: 114 GLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL     D  F    +   AH +    +   +   A    + S    + +    TP   K
Sbjct: 2   GLLGVTVDEEFGGADMGYLAHVVAMEEISRASASVALSYGAHSNLCVNQIFRNGTPSQRK 61

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+    +                L ++E   G+D+ ++  + +   D         
Sbjct: 62  KYLPKLIDGTH-------------VGALAMSEPNAGSDVISMQLKAENKGDHFVLNGNKM 108

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  + P +D  ++ A+ +   G   +   + + +  G  + +  +K+G R + T EL F+
Sbjct: 109 WITNGPDADIVVLYAKTDVNAGSRGITAFIVERNVEGFSHAQKLDKLGMRGSNTCELVFN 168

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N       +LG+LN     +        +  A   +  M+  +   + Y   R   G  +
Sbjct: 169 NCVVPKENILGELNQGVEVLMSGLDYERVVLAAGPLGIMQACMDIVVPYVHEREQFGKSI 228

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +++  IAD+   ++AA A  + +A + D   +  ++AA A         +  ++A 
Sbjct: 229 GEFQLVQGKIADMYSRMSAAKAYVYTVAAACDRGNATRKDAAGA-------ILYSAELAT 281

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  +A++ +GG+GYI E    R  R++    I  G+     + +   L
Sbjct: 282 QMALDAIQLLGGNGYINEYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 330


>gi|149914733|ref|ZP_01903263.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149811526|gb|EDM71361.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 380

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L  +    G                +           MA    
Sbjct: 26  PHARIWEREGTIP--KKLWPQIAELGFGGLYVSEEGGGSGLSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P + S E               +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDSFASDEMKARVMPGVLSME-------------TVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  + ++G Y L+G K F+S    SDA+I++ +  G  G   +  +  +   
Sbjct: 131 SDAAALKTRAGRSNEG-YILNGTKAFISGGGYSDAYIVMVRT-GEDGPRGISTIYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G RS  T +++F         L+G+ N              L+ A  S
Sbjct: 189 PGLSFGGLEDKMGWRSQPTAQVQFDECNIPAQNLVGEENKGFSYAMAGLDGGRLNIAACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L   + Y   R   G  +     ++  +AD+ + + AA     + A   D   
Sbjct: 249 LGAAQQALDMTLTYMGERKAFGKPIDQFQALQFRLADLEIQLQAARTFLRQAAWKLDTGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    ++ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKKFVTEAGSNIVNQCLQLHGGYGYLADYGIEKLVRDLRVHEILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M L V   +
Sbjct: 363 GTNEIMRLIVARQM 376


>gi|320335140|ref|YP_004171851.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756429|gb|ADV68186.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 393

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 126/360 (35%), Gaps = 31/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
              LR     GL  +     +                   A      ++S        M+
Sbjct: 50  REQLRGLAQLGLLGATVPERWGGAGLDSVTYALCLEEIAAADASVAVIVSVQNGLPEQMI 109

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ +        LTE   G+D A++  + ++  
Sbjct: 110 LRYGTDAQRERYL-------------RPLAEGRHIGAFCLTESTAGSDAASLQLRAERDG 156

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  S   +D ++++A+  G  G   V   + +    GL + R + K+G  
Sbjct: 157 DHYVLNGSKAWITSGSQADTYLVMART-GGAGARGVSCFIVENGTPGLSFGRPEEKMGLH 215

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
           +  T  ++F +         N+     E + I +       +  A+ ++   R +   A 
Sbjct: 216 AAHTTTVQFEDVRVPA---ENLVGAEGEGLIIALSSLDAGRIGIAMQALGIARAAFEHAA 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  L +   +   IAD+A  I AA  ++ + A   D  +    EA+ A+++
Sbjct: 273 RYALEREQFGRKLREFEGVSFKIADMAAHIEAARLVALKAAWLKDAGRPYGREASIAKLL 332

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A          A  V  +A++  GG+GY  E  + R YR++    I  G+     L +  
Sbjct: 333 A-------SDAAVNVTRDAIQVFGGNGYSREYPVERLYRDAKVTEIYEGTSEIQRLVISR 385


>gi|126642910|ref|YP_001085894.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 562

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 87/478 (18%), Positives = 164/478 (34%), Gaps = 63/478 (13%)

Query: 70  AQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEP 126
            +  A         L+      G  W D V   P  +    ++ I  G      +  +  
Sbjct: 6   LEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLSAEEQYGG 65

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  I  + +   +    G     S  +   +    +      + P + S  +  T
Sbjct: 66  QGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSEEQKNTYLPNLVSGVWTGT 125

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---- 242
                        + LTE   G+D+  I ++ +  +DG Y +SG K F+S+   D     
Sbjct: 126 -------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENI 172

Query: 243 -FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELE 290
             I+LA++ G       +  F+VP+   +     G  N +    +++K+G   NAT  + 
Sbjct: 173 IHIVLARLPGAPKGTKGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVIN 232

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--- 347
           F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R        
Sbjct: 233 FDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSG 292

Query: 348 ---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI- 395
                     +I  P ++  +           AL + LA   D  E     EE  +A   
Sbjct: 293 PKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNI 352

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              + PI K +  +         ++  GG G+I E  + +  R++    +  G+     L
Sbjct: 353 LSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQAL 412

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           D+L                + Q  G+  +    I+   +   K++  +  F+    AL
Sbjct: 413 DLLG-------------RKVLQTQGAMLRDFTKIVHKFVEANKDNAAMKEFVEPLAAL 457


>gi|300692755|ref|YP_003753750.1| acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum PSI07]
 gi|299079815|emb|CBJ52492.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum PSI07]
          Length = 376

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 130/375 (34%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + R+    G +      ++                        
Sbjct: 24  PHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEAYGGAGMDYLSLALILEEIAAGDGGT 81

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +    SM+         + W               P+ + ++     LTE   
Sbjct: 82  STVVSVNNCPVCSMLMAYADEAQKQRWL-------------VPLARGAMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +A+ +   +  D        ++  S   +D  I++A  +       +   L   S 
Sbjct: 129 GSDASALRTTATRDGDHWVLNGVKQFITSGKHADVAIVMAVTDKAAAKRGISAFLVPTST 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    RL++K+G  S+ T ++ F +        L            L  L+   + ++ 
Sbjct: 189 PGYIVARLEDKLGQHSSDTAQIVFEDCRIPADCLLGAEGEGYR--MALSGLEGGRIGIAA 246

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +       A+ YA+ R   G  L     ++  +A++A  I  A  + +  A+  D 
Sbjct: 247 QSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMATRIDVARQMVWHAASLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A       K    +MA  V ++A++  GG GY+ +  + R YR+     I
Sbjct: 307 GRPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGYVSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNL 457
             G+ +   + +   
Sbjct: 360 YEGTSDIQKILIARA 374


>gi|218130260|ref|ZP_03459064.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697]
 gi|317473749|ref|ZP_07933030.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           eggerthii 1_2_48FAA]
 gi|217987544|gb|EEC53872.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697]
 gi|316910006|gb|EFV31679.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides
           eggerthii 1_2_48FAA]
          Length = 568

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/471 (19%), Positives = 175/471 (37%), Gaps = 48/471 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDGRGLSMFIYDKRDGGVNVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKCELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE----QLF--STLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+        +L   S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLRDYELIPCSEEMQPLLDRVKEMTNKFEA 488

Query: 490 SISLCKE------DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
             +  KE         +AR L E  A+   +  L +       ++F ++  
Sbjct: 489 CTNAVKESGNQELLDFVARRLYEMAAVCVMSHLLIQDATKA-PELFAKSAL 538


>gi|187920336|ref|YP_001889367.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718774|gb|ACD19997.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 377

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 141/394 (35%), Gaps = 35/394 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +        P   +WD+    PA   ++R+    G    I    +      
Sbjct: 9   QRMIRDAARDFAT-EQLAPHAGQWDREAQLPA--EVVRQMGELGFLGMIVPAEWGGSYTD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 A             LMS   +     +    T      +   + +         
Sbjct: 66  YVAYALALEEIAAGCAACATLMSVHNSVGCGPILNFGTEAQKDRYLQDLATG-------- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                       LTE + G++   + ++   + DG + L+G K F+++   +D  I+ A 
Sbjct: 118 -----RRIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILNGSKQFVTNGSRADLAIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +      G    + ++K+G R++ T  +   +       + N+   P
Sbjct: 172 TDPDRGKRGLTAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCAVP---EANLLGEP 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADI 362
            E ++I L  L+   + ++   V +A A       YA  R   G  L +   +   +AD+
Sbjct: 229 GEGLRIALSNLEGGRIGIAAQAVGIARAAFDAARLYANERIQFGKALKEHQTIANMLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L    A      K    E       A   K +  ++A  + + A++  GG 
Sbjct: 289 ATRLNAARLLVHHAARLRTAGKPCLSE-------ASQAKLFASELAEEICSNAIQIHGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 342 GYLEDYAVERHYRDARITQIYEGTSEVQRMLIAR 375


>gi|17989368|ref|NP_542001.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|17985240|gb|AAL54265.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
          Length = 456

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 133/359 (37%), Gaps = 32/359 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         F  +      ++  A  L   +     ++ + +   +  + +  T   
Sbjct: 122 ELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQ 181

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +++ P++ S E             +     LT+   G+    + +   +  D  Y L+G
Sbjct: 182 KRNYLPRLASGE-------------LLSSFCLTKPDAGS----LKTTAVRDGD-FYILNG 223

Query: 231 HKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++ P++D F ++A+      G   +   + + +  GL   +   K+G +   T  
Sbjct: 224 TKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSN 283

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F N        +      G    MK+L    L  A +S       LA+ + YA  R  
Sbjct: 284 VIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQ 343

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D  +++  +AD   +I AA  +    A   D  ++ S E       A   K + 
Sbjct: 344 FGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTE-------ASCAKMFA 396

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +M   V    ++  GG+GY+ E +I R YR+     I  G+     + +   + +   
Sbjct: 397 TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREAR 455


>gi|94500058|ref|ZP_01306593.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94427916|gb|EAT12891.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 381

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 126/377 (33%), Gaps = 33/377 (8%)

Query: 93  RWDKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
             + V FH  W         L  +    G  C     ++  +     +            
Sbjct: 23  DKEAVPFHEQWEKDGQVSRELWLKGGEMGFLCPTAPEAYGGLGCDFRYSAVVMEEISRTG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                    S      +         + + PK+ + E                 + +TE 
Sbjct: 83  CSGIGWPLHSDIVMPYIQNWGNEEQKQKYIPKLITGEM-------------IGAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+  + S   K  D  Y L+G K F+++  M+D  I++A+ +   G   +   L +
Sbjct: 130 GAGSDLQGVKSTAVKNGDH-YVLNGSKTFITNGQMADLVIVVAKTDPSKGAAGISLFLVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDS 320
              +G       +KIG ++  T EL F++        L     TG +  M+ L    L  
Sbjct: 189 TQWDGFEKGSNLDKIGMKAQDTSELFFNDVKVPAENLLGGQEGTGFMALMQELPQERLLV 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +V+    +L     Y + R   G  +      +  +A++  +  A  A +       
Sbjct: 249 ALTAVAACEAALDWTKDYIKERKAFGKPICKFQNTRFKMAELITETNAMRAYT------- 301

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       +       A   K     +   V+ E ++  GG GY+ E  IAR + +S   
Sbjct: 302 DFCLELHLDKKLDIPTAAGLKQITTDLQFKVMDECVQLHGGYGYMTEYPIARAWADSRVQ 361

Query: 441 SILLGSGNAMVLDVLNL 457
            I  G+   M   V   
Sbjct: 362 KIYAGTNEIMKEIVARA 378


>gi|323528144|ref|YP_004230296.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385146|gb|ADX57236.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 377

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 141/396 (35%), Gaps = 35/396 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A  +        P   +WD+    PA   ++R+    G    I    +    
Sbjct: 7   EEQRMIRDAARDFAT-ERLAPNAAQWDRDAQLPA--DVVRQMGELGFLGMIVPPQWGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTN 187
                   A             LMS   +     +    +      +   + +       
Sbjct: 64  TDYVAYALALEEIAAGCAACATLMSVHNSVGCGPILNFGSDAQKDRYLQDLATG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
                         LTE + G++   + ++   + DG + L+G+K F+++   +D  I+ 
Sbjct: 118 -------RRIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILNGNKQFVTNGARADIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    + ++K+G R++ T  +   +       + N+  
Sbjct: 170 AVTDPDRGKRGLSAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCTVP---EANLLG 226

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
            P E ++I L  L+   + ++   V +A A       YA  R   G  L D   +   +A
Sbjct: 227 EPGEGLRIALSNLEGGRIGIAAQAVGIARAAFDAARVYASERMQFGKALKDHQTIANMLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L    A      +    E       A   K +  + A  + + A++  G
Sbjct: 287 DMATRLNAARLLVHHAARLRSAGERCLSE-------ASQAKLFASETAEQICSNAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 340 GYGYLEDYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|253573723|ref|ZP_04851066.1| butyryl-CoA dehydrogenase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847251|gb|EES75256.1| butyryl-CoA dehydrogenase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 594

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 86/457 (18%), Positives = 165/457 (36%), Gaps = 36/457 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +    ++  +   +      +     A   A    +        +  
Sbjct: 66  DLLRKAGEVGLLGADVPEAYGGMGLDKVSTTLISEKLTKASSFALSAGAHVGIGTLPIVF 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PK+ + E             +     LTE   G+D     +      DG
Sbjct: 126 FGTDAQKRKYLPKLATGE-------------LLAAYCLTEPSSGSDALGAKTTAVLSEDG 172

Query: 225 I-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   +D FI+ A+V G          + + S  G+     + K+G +
Sbjct: 173 THYVLNGTKQFITNAGFADIFIVYAKVNGTD----FSTFIVERSMEGVSIGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L   +    +   L  V  G +    IL       A   +   + ++  A  YA
Sbjct: 229 GSSTCPLILEDVKVPVENLLWEVGKGHLIAFNILNIGRFKLAAGCLGSSKDAIEYAAKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR------------S 387
             R   G  +   P++ + +A++        ++ +R A  FD   +             +
Sbjct: 289 NERTQFGQKISSFPLIGKKLAEMNTRTFVLESMVYRTAGLFDVGLADVDYSSADVGYQSA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ A  ++   I K +  ++   V  E ++  GG G+ +E  I R YR+S  N I  G+ 
Sbjct: 349 KQIAEYQLECSINKVFGSEVLDFVADEGVQIHGGYGFTQEYRIERIYRDSRINRIFEGTN 408

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               L +   L K     E       Q L +   + I   R      +E+  L   + +K
Sbjct: 409 EINRLLIPGALVKRAMKGELPLLQAAQKLQAELMEPIPS-RTFEGTLEEEAYLL-SMAKK 466

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           I L   A A+ +  +    +  + +   D   + + M
Sbjct: 467 IFLMVGAQAVQKYQLKLEREQEVLSHLADMMIAIYAM 503


>gi|153837598|ref|ZP_01990265.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149749095|gb|EDM59906.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 389

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 135/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P     D     P+   L       GL        +    +   AH +    +   
Sbjct: 29  EHIAPIAADIDHYNQFPSH--LWPLLGEMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPTQREKYLPKLVDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EVNSGSDVVSMQLKAEDKGDHFLLNGTKMWITNGPDADVVVVYAKTDADAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           + S  G    +  +K+G R + T EL F+N        L      VE +        +  
Sbjct: 194 ERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  +AD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAYVYTVATAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMALDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|302415387|ref|XP_003005525.1| short-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
 gi|261354941|gb|EEY17369.1| short-chain specific acyl-CoA dehydrogenase [Verticillium
           albo-atrum VaMs.102]
          Length = 441

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 131/355 (36%), Gaps = 26/355 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMT 166
            +    GL        +          +               ++    T   + +    
Sbjct: 107 EQLFEQGLMGIEIPEEYGGTGANFTSAVIGIEELARVDPSVSVMVDVHNTLVNTAIIKYG 166

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + K + PK+               T+      L+E   G+D  A+ ++  + +DG  
Sbjct: 167 SQALKKKFLPKL--------------ATNTVGSFCLSEPVSGSDAFAMATKATETADGYT 212

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
              G  W  +S  +D FI+ A ++   G   +   + +    G    + + K+G ++++T
Sbjct: 213 ISGGKMWITNSMEADFFIVFANLDHSKGYKGITAFVVEKGTEGFSIAKKEKKLGIKASST 272

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS 345
             +   +     +   N+     +  K  I  L+   + ++     LA        +   
Sbjct: 273 CVINLDDVK---IPKENLLGEKGQGYKYAISLLNEGRIGIAAQMTGLALGSWENAVKKQF 329

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G ++ +   M+  IA    +IAAA +L +  A   +  +    +AA A       K +  
Sbjct: 330 GKLVGEFQGMQHQIAQSYTEIAAARSLVYNAARKKEAGEDFVMDAAMA-------KLYAS 382

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++A  V   A+E +GG G++ +    + +R+S   +I  G+ N  +  +  LL+K
Sbjct: 383 QVAGRVSGLAIEWMGGMGFVRDGPAEKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 437


>gi|91788874|ref|YP_549826.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698099|gb|ABE44928.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 389

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 130/379 (34%), Gaps = 34/379 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         +  ++  +G  C      +      + + +      +         
Sbjct: 29  FHAQWEEQGYVDRQVWNKAGDNGFLCMTMPEVYGGSGADKLYSVVQMEELVRGGFSGIGY 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  +    T    + + P++ S               +   + ++E   G+D+
Sbjct: 89  GLHSEIVAPYILHYGTSLQKETFLPQLASG-------------RMVGAIAMSEPAAGSDL 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             + +   K SDG Y L+G K F+++   +D  I++A+     G      LL +    G 
Sbjct: 136 QGVKTTAIKQSDGSYLLNGSKTFVTNGWHADLVIVVAKTNPAAGAKGTSLLLVERGMPGF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
              +   K+G ++  T EL F +        L            L+       L  AI +
Sbjct: 196 EVGKRLKKLGLKAQDTSELFFHDVKVPAGHLLGGEAHENRGFICLMEQLPWERLQIAITA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           VS  + ++   + Y + R V G  +      +  +A++  ++  A           D+  
Sbjct: 256 VSAAQAAIDWTLAYVKERKVFGQPVASYQNTRYKLAELQTEVQVARVFV-------DKCT 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                       A + KYWC  +   V+ E ++  GG GY+ E  I R Y ++    I  
Sbjct: 309 ELVAADMLDTATASMAKYWCSDLQCKVMDECVQLFGGYGYMWEYPITRAYADARVQRIYG 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M   +   +  G  
Sbjct: 369 GTNEIMKEVISRSMGLGGK 387


>gi|147677911|ref|YP_001212126.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274008|dbj|BAF59757.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 376

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 141/380 (37%), Gaps = 28/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D     P   ++L+     GL C +  +                      
Sbjct: 21  EHVDPIAMEVDATGELPL--SILKSWKETGLICMVAPKEVGGPELDAVSCAVVMEELSYG 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L     +  +   +  V +  TP   K     +    Y                  +TE
Sbjct: 79  CLGVATALGANNLCSFPVLIAGTPEQKKLHFGTLLEGNY--------------GAFAMTE 124

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+DI AI++  +K  D  Y L+G K F++   ++  +I+ A  +   G   +   + 
Sbjct: 125 PCAGSDIGAISTTARKKGDE-YVLNGTKCFITQGGLAAIYIVFASTDKSKGKKGLSAFIV 183

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
           +    G+   ++++K+G R++ TVEL   +        L     G    MK L    L  
Sbjct: 184 ERWREGISTGKVEDKMGIRASNTVELILQDVRVPASHLLGKEGDGMKLAMKALDSGRLMV 243

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +L E + + + R  +G  L  Q  +   IAD+   + A   L +R A   
Sbjct: 244 AAQAVGVARRALDECVKFVKARVDNGKPLASQQAVSFKIADMVAAVEAGKQLVYRGAMLK 303

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S  +A       I K +C +MA  V  +AME +G  GY  E  + + +R++   
Sbjct: 304 DTCQPYSRHSA-------IAKLFCTEMAIRVARDAMEIMGVYGYTRETYVEKIWRDARIL 356

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           SI  G+   +   +   L +
Sbjct: 357 SIYEGTNQILRGVISRSLLR 376


>gi|169767448|ref|XP_001818195.1| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus
           oryzae RIB40]
 gi|238484315|ref|XP_002373396.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|83766050|dbj|BAE56193.1| unnamed protein product [Aspergillus oryzae]
 gi|220701446|gb|EED57784.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 437

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 143/385 (37%), Gaps = 36/385 (9%)

Query: 85  HAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              GP     D+ E   PA   ++ +    GL        +          I A      
Sbjct: 76  EQIGPKVRDMDEAEAMDPA---IVEQLFEQGLMSIEVPEEYGGAGMNFTSAIVAIEELAR 132

Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  ++    T   + +      +  + W PK+               T       L
Sbjct: 133 IDPSVSVMVDVHNTLVNTAIMKYGDAQARRTWLPKL--------------ATGTVGSFCL 178

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D  A+ ++ +K+SDG        W  ++  S  FI+ A ++   G   +   +
Sbjct: 179 SEPASGSDAFALQTKAEKLSDGYKLNGSKMWITNAMESGVFIVFANLDPSQGYKGITAFI 238

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G    + + K+G R+++T  L F +    ++   N+     +  K  I  L+  
Sbjct: 239 VEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKSNLLGEEGQGYKYAISVLNEG 295

Query: 322 IMSVSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
            + ++     LA      A  Y    R   G ++     M+  +A    +IAAA AL + 
Sbjct: 296 RIGIAAQMTGLALGAWENAARYVWNDRRQFGQLIGTFQGMQHQLAQAYTEIAAARALVYN 355

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R
Sbjct: 356 AARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGSAVEWMGGMGFVREGIAEKMFR 408

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   +I  G+ N  +  +  LL+K
Sbjct: 409 DSKIGAIYEGTSNIQLQTIAKLLQK 433


>gi|50083857|ref|YP_045367.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49529833|emb|CAG67545.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 625

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 89/488 (18%), Positives = 170/488 (34%), Gaps = 64/488 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E +   ++    +  A         L+      G  W D V   P  +    ++ I  G 
Sbjct: 58  ENVSRELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGF 117

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +  +       +  I  + +   +    G     S  +   +    + +    + 
Sbjct: 118 PSLSAEEQYGGQGLPNSLGIAISEMVGSSNWAWGMYPGLSHGAVRTLEHHGSEQQKDTYL 177

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + S  +  T             + LTE   G+D+  I S+ +   DG Y +SG K F+
Sbjct: 178 PNLVSGVWTGT-------------MCLTESHAGSDLGIIRSKAEPNEDGSYAISGEKIFI 224

Query: 236 SSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G       +  F+VP+ L +     G  N +    +++K+
Sbjct: 225 SAGEHDMADNIIHIVLARLPGAPKGTKGISLFIVPKFLVNEDGSLGERNHVRCGSIEHKM 284

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA
Sbjct: 285 GIHGNATCVINFDRAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESSFQGALTYA 344

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385
           + R                  +I  P ++  +           AL + LA   D  E   
Sbjct: 345 KDRLAMRSLSGPKAPEKDADPIIVHPAVRNMLLTQKAFAEGGRALVYLLAQYADVVEHGI 404

Query: 386 RSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             EE  +A      + PI K +  +         ++  GG G+I E  + +  R++    
Sbjct: 405 TEEERKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIAC 464

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD+L                + Q  G+  +    I+   +   K++  + 
Sbjct: 465 LYEGTTEIQALDLLG-------------RKVLQTQGAMLRDFTKIIHKFVEANKDNAAMK 511

Query: 502 RFLTEKIA 509
            F+ E +A
Sbjct: 512 EFI-EPLA 518


>gi|167645838|ref|YP_001683501.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167348268|gb|ABZ71003.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 146/404 (36%), Gaps = 39/404 (9%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  +  T    A  A+   P+           D          L       GLH  
Sbjct: 14  LGETVDMIRDTTARWA--ADRLAPR-------AAEIDATNTFA--RDLWPEMGELGLHGI 62

Query: 119 IWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
             +  F  +      H +    +   +        + S    + +    TP   + + P 
Sbjct: 63  TVEEEFGGLGLGYLEHVVAMEEVSRASASIGLSYGAHSNLCVNQIRRWGTPEQKRKYLPG 122

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++ ++ +K  D         W  +S
Sbjct: 123 LISGEH-------------LGSLAMSEAGSGSDVMSMRTRAEKKGDRYILNGTKFWITNS 169

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +D  ++ A+     G   V   L +    G    +  +K G R + T EL F +    
Sbjct: 170 PTADTLVVYART--GEGNGGVSTFLIEKGMRGFSVSKKLDKFGMRGSDTAELVFEDCEVP 227

Query: 298 LLGDLN-VSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               +  V  G    M  L Y  + +    +  M+  L   + Y R R   G  +    +
Sbjct: 228 AENVMGPVGGGAGILMSGLDYERTVLSGGPLGIMQACLDVVLPYVRERKQFGKAIGSFQL 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  +AD+ + + +A A  + +A + D  K+   +AA A ++A        + A  V  E
Sbjct: 288 MQAKVADMYVALNSARAYVYAVARACDAGKTTRFDAAGAILLA-------SENAVRVSLE 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++ +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 341 AVQALGGAGYTKEWPVERFVRDAKLYDIGAGTNEIRRFLIGREL 384


>gi|229489405|ref|ZP_04383268.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323502|gb|EEN89260.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 380

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 118/350 (33%), Gaps = 24/350 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +   F    +     ++               +S    S   +    T    
Sbjct: 50  QAGLLSLPYPEEFGGGDQPYEVYLQVLEEIASRWAAVAVAVSVHSLSCFPLFTFGTDEQK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P +                +      L+E + G+D AA++ +      G       
Sbjct: 110 NRWLPDMLGG-------------NTIGAYSLSEAQAGSDAAALSCKATPTDGGYRVNGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D + + A+     G   V  LL D    GL + + + K+G R+  T    +
Sbjct: 157 AWITNGGRADFYNLFARTSDD-GSRGVSCLLVDKDTEGLSFGKPEEKMGLRAVPTASANY 215

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            + F     L+G                 L  A ++V   + +L +A+ YA+ R   G  
Sbjct: 216 DDAFIPEERLIGQRGQGLPIAFSALDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKR 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +ID   +   +AD+A  + +A A     A   D     S         A + K      A
Sbjct: 276 IIDHQGLGFVLADMAAAVDSARATYLDAARRRDAGVPYSR-------NASVAKLVATDAA 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++  GG GY ++  + R+ RE+    I  G+     L +   L
Sbjct: 329 MKVTTDAVQVFGGYGYTQDFPVERYMREAKITQIFEGTNQIQRLVIARQL 378


>gi|284992309|ref|YP_003410863.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284065554|gb|ADB76492.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 381

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 133/375 (35%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEA 148
           V FH  W         +   +   GL  +  D  +    VR   ++       +      
Sbjct: 26  VPFHDQWERDGIVPREVWTSAGAQGLLGTDMDERYGGGGVRDFRYQAVLDEELMRIGATG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +      +  + T    + W P     E             +   + +TE   G
Sbjct: 86  LGFGLHNDVVGPYLRDLGTEEQKQRWLPGFCGGE-------------LITAIAMTEPAAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           +D+  I +  +   DG + LSG K F+++ + +D  I++A+      G   +  L+ +  
Sbjct: 133 SDLQGIRTTARPDGDG-WLLSGSKTFITNGINADLVIVVARTAPDAPGSRGLSLLVVERD 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG ++  T EL F         LLG  N     + +      L  A+ 
Sbjct: 192 MPGFTRGRNLAKIGLKAQDTAELYFDGVRVPAENLLGTENRGFAHLMENLPQERLSIAVG 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     LA+ + Y   R   G  +      +  +A++  ++  A           D  
Sbjct: 252 AVAAAETVLAQTVEYVTGRTAFGRPVGSFQNSRFVLAELQTEVTIARTFVDECVRQLDRG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    +AA A       KYW  ++   V    ++  GG GY++E  +++ +R++    I 
Sbjct: 312 ELTPVDAAMA-------KYWTTELQNKVADRCLQLHGGYGYMDEYPVSKAWRDARIQPIY 364

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   V   +
Sbjct: 365 GGTNEIMREIVGRAM 379


>gi|86158072|ref|YP_464857.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774583|gb|ABC81420.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 379

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 135/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD  E  P    ++ +    GL        +        A  +    +       
Sbjct: 26  PHAAAWDASETFP--REVVAKLGAMGLLGITVPERYGGAGMGALAVAVVVEEVARFDGSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +      +A   T    + + P + + E                   LTE   
Sbjct: 84  ALTVASHNGLGTGHIARFGTDAQKERYLPALATGE-------------RLAAWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +A+ +   +  DG        +     +  +F++LA+ +       +   + +   
Sbjct: 131 GSDASAMRTTAVRRGDGWVLSGSKTFITQGTVGGSFVVLARTDPGRRHHGITAFILEPGM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G   + +  K+G RS+ T +L            L  V  G ++ ++IL    +    ++
Sbjct: 191 KGFSQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGDVDRGFIDTLQILDRGRITIGALA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L E+  YAR R   G  + +   +   +AD+A ++ AA  L  R A   D  +
Sbjct: 251 VGLGRGALEESRAYARERQAFGKPIAEFQAIGFMLADMATELDAARLLVRRAAAMCDAGQ 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A+ A       K +  + A    + A++  GG GY  +  + RH+R++    I  
Sbjct: 311 PFGAAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHFRDAKLTEIGE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 364 GTSEVQRMVISREILR 379


>gi|54024145|ref|YP_118387.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015653|dbj|BAD57023.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 382

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 126/367 (34%), Gaps = 25/367 (6%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           ++ H     L R +   GL        +       AH+             A      + 
Sbjct: 36  IDQHQVDRDLWRAAGELGLLGLSIPEEYGGGGGTFAHEAVLVEEQARIGDTAWGAAMHNA 95

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A  +    T    + W P++ S E             V   L +TE   G+D+ AI +
Sbjct: 96  IVAHYLLAYGTEEQKRTWLPRLCSGE-------------VVGALAMTEPGTGSDLQAIRT 142

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRL 275
           +  +  D         +  +   +D  I++A+      G      +L +    G    R 
Sbjct: 143 RAVREGDDYVINGAKTFITNGGQADLVIVVAKTGAIADGAAGTSLILMETDRPGFRRGRR 202

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            +KIG R   T EL F +    +   L      G V+ M+ L    L   + SV  M  +
Sbjct: 203 LDKIGQRGQDTSELFFDDVRVPVGNLLGESEGQGFVQLMQQLPQERLIILVGSVVAMETA 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA+ I Y++ R   G  L      K  +A++A +   A           D+  ++     
Sbjct: 263 LAQTISYSKERQAFGKPLFAFQNTKFTLAEVATETRIARVF-------LDDCITKHIRGE 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K+W  +     + E ++  GG GY+ E  I+R + +     I  G+   M 
Sbjct: 316 LDVPTVAMAKWWITERTMVALDECLQLHGGYGYMTEYPISRAWVDHRVQKIYAGTNEIMK 375

Query: 452 LDVLNLL 458
             +   L
Sbjct: 376 EIIARTL 382


>gi|260901259|ref|ZP_05909654.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|308106805|gb|EFO44345.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
          Length = 389

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 134/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P     D     P+   L       GL        +    +   AH +    +   
Sbjct: 29  EHIAPIAADIDHYNQFPSH--LWPLLGEMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPTQREKYLPKLVDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EVNSGSDVVSMQLKAEDKGDHFLLNGTKMWITNGPDADVVVVYAKTDADAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           + S  G    +  +K+G R + T EL F+N        L      VE +        +  
Sbjct: 194 ERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMNAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMALDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|330825434|ref|YP_004388737.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329310806|gb|AEB85221.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 138/406 (33%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +     RWD     P     + ++   G       
Sbjct: 2   DFELSEDQRAFADTARQFAQAELAPH---AARWDAEGIFPV--EAIAKAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+       V  +W   + S 
Sbjct: 57  ESVGGLQLPRLDATLVFEELAAVDPSTTAFITIHNMATWMLGTWAQDAVRAEWGEALTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A+I ++ + +        G  +   +  + 
Sbjct: 117 -------------RKLASYCLTEPGSGSDAASIKTRAELVGGEYVINGGKAFISGAGSTH 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  + + G   +          G+ Y + + K+G  S  T ++ F N       
Sbjct: 164 VLVLMARTGDAQSGAAGISAFAVPADLPGIHYGKKEEKMGWNSQPTRQISFDNVRIPAQN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +LA A  Y + R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V+ EA++
Sbjct: 284 KLADMATELIAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFNVVNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 338 LHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIGRRMLDGDA 383


>gi|260461928|ref|ZP_05810173.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032175|gb|EEW33441.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 596

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 98/516 (18%), Positives = 181/516 (35%), Gaps = 65/516 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGE-----RWDK--VEFHPAWHALLRRSIHDGLH 116
            VL     E A++A      +H     G+     R D   V     +     +    G  
Sbjct: 36  DVLEAILAEGAKLAEN---VMHPLNRVGDMEGCVRHDDGSVTTPKGFKEAFDQYREGGWM 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  F       A     A   + A +        +  + + +    T      W P
Sbjct: 93  GLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGLTQGAIAAIITHGTDEQKAKWLP 152

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++    +  T             + LTE   GTD+  + ++     DG Y +SG K F+S
Sbjct: 153 RMVEGAWTGT-------------MNLTEPHCGTDLGLLRTKAVPNGDGTYKISGQKIFIS 199

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +   D       ++LA++EG       +  F+VP+L  D     G  N L    ++ K+G
Sbjct: 200 AGEHDMSDNIVHLVLARIEGAPEGVKGISLFIVPKLKLDASGNPGERNTLSCGSIEEKMG 259

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              N+T  + +    G LLG+ N     +  M     L   +  +S   ++   A+ YA+
Sbjct: 260 IHGNSTCVMNYDEAEGTLLGEANGGLKAMFTMMNEARLGVGLQGLSLSEIAYQNAVAYAK 319

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDE 382
            R                  +I  P ++R++  +     A  AL+        +A+   +
Sbjct: 320 DRLQGRSLSGPKAPDKKADPIIVHPDIRRSLMTMRAFNEAGRALALWTAIKSDVAHRSGD 379

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K R     Y  +M P+ K             A +  GG GYIEE  +++  R++    I
Sbjct: 380 DKDRQAADDYTGLMTPVVKGVLTDKGFDHTVMAQQVFGGHGYIEEHGMSQFVRDARIAMI 439

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDK 498
             G+     LD++   L   G    +  F  + +  +   + +K+    +       + +
Sbjct: 440 YEGANGIQALDLVGRKLGLNGGRAVQAFFKEVGEFCEENRADEKMAPFTKALKKGLNDLQ 499

Query: 499 GLARFLTE-KIA---LASSAAALYRAGMNDIADVFL 530
               +L +  +A    A +A+  Y      +A  ++
Sbjct: 500 AATMWLLQNGMAKPDNAGAASTDYMHLFGLVALGYM 535


>gi|111019622|ref|YP_702594.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819152|gb|ABG94436.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 153/405 (37%), Gaps = 41/405 (10%)

Query: 63  EYVLSCTAQELARMAN--YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +  L+   +E  ++A    N   +       +R + V+      A++ +    G      
Sbjct: 2   DLTLTAEQEEFRQLARDFLNKEVVPHRAAW-DRAESVDT-----AIVEKLADIGFFGMTI 55

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIF 179
              +  +                A      ++S S+     ++    T    ++W P+I 
Sbjct: 56  PEEYGGLGGDYITYCLGMEELGRADSAVRGIVSVSMGLVGKVILSHGTEDQKREWLPRIA 115

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           S E                  GLTE   G+D   + ++  +  D  Y ++G K F+++  
Sbjct: 116 SGE-------------ALACFGLTEPDNGSDPGNLKTRAVRSGDD-YVINGSKIFITNGT 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +   ++ A+  G  G   V   L      G   + +  K+G R  AT EL F++     
Sbjct: 162 WAKLCLVFART-GGSGPKGVSAFLVPTDTPGFESREIHGKLGLRGQATAELSFTDVRVPA 220

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQ 352
                +     +   I ++ LD   +SV    V      L  A+ Y+R R      L   
Sbjct: 221 SC---LLGSEGQGFSIAMHSLDKGRVSVGAGCVGIIQGCLEAAVDYSRERTQFNRPLASF 277

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  IAD+++D  A   L++R A+  +  +     A+ A       KY+C + A    
Sbjct: 278 QLVQDLIADMSVDADAGRLLTWRAADLIERGEPFGTAASKA-------KYFCSEAAVRAA 330

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             A++  GG GY++E  +A++ R++   ++  G+     L +   
Sbjct: 331 NNAIQIFGGYGYVDEYPVAKYLRDARVMTLYEGTSQIQKLLIGRA 375


>gi|217972707|ref|YP_002357458.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217497842|gb|ACK46035.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 389

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 150/405 (37%), Gaps = 39/405 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE V      ++ R A  +    H   P   + D     P  + L       GL     
Sbjct: 12  LGEDV------DMLRDAVQDFAT-HEIAPIAAKVDHDNAFP--NELWPVLGSMGLLGVTV 62

Query: 121 DRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              +    +   AH +    +   +        + S    + +           + PK+ 
Sbjct: 63  AEEYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLV 122

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++    +K  D         W  + P 
Sbjct: 123 SGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRFILNGNKMWITNGPD 169

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  +++ A+ +   G   +   + +    G    +  +K+G R + T EL F +      
Sbjct: 170 AHTYVIYAKTDLTKGAHGITAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDVEVP-- 227

Query: 300 GDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQP 353
            + N+  G    +K+L+  LD   + +SG  + +  +       Y   R   G  + +  
Sbjct: 228 -EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNSCMDIVVPYIHEREQFGKSIGEFQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +  
Sbjct: 287 LVQGKLADMYTGMNAAKSYVYAVAKSCDRGETTRKDAAGA-------ILYSAELATKMAL 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 340 DAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|85710062|ref|ZP_01041127.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688772|gb|EAQ28776.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 443

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 143/392 (36%), Gaps = 31/392 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             + R A+     L       E+ D+ ++ P    L +     GLH          +   
Sbjct: 74  DSVGRFADEQIAPL------AEKIDREDYFP-QAELWQAMGELGLHGITVGEEDGGLGLG 126

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              H I    +   +        + S    + +           + P + S E+      
Sbjct: 127 YLEHVIAVEEVSRASASLGLSYGAHSNLCINQIRRWGNGEQKAKYLPGLISGEH------ 180

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  + + +  G        W  ++  +D  ++ A+ 
Sbjct: 181 -------VGSLAMSEASAGSDVVSMKLKAEAVQGGYVLNGTKFWITNATYADTLVVYAKT 233

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           +G  G   +   L +    G    +   K+G R + T EL F +       ++G LN   
Sbjct: 234 DGNAGSRGITAFLIEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPEDRVMGPLNGGV 293

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G +        +  A + +  M+  L   I Y R R   G  +    +M+  +AD+ + +
Sbjct: 294 GVLMSGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLMQAKVADMYVAL 353

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A A ++ +A + D  ++   +AA           +  + A  V AE+++ +GG+GY  
Sbjct: 354 QTARAYTYAVAKACDADQTTRFDAAG-------VILYASESAFKVAAESVQALGGAGYTL 406

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R+ R++    I  G+     + +   L
Sbjct: 407 DWPVERYMRDAKLLDIGAGTNEIRRMLIGREL 438


>gi|330824118|ref|YP_004387421.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309490|gb|AEB83905.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 383

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 127/355 (35%), Gaps = 26/355 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        F  +      ++ A      A      L+  +V   S  +    TP  
Sbjct: 46  AMGLFGLTIPEKFGGLELTMEEEVLAVFELCRASPVFRSLLGTTVGIGSQGILFDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E                   LTE   G+D A++ +   +  D       
Sbjct: 106 QAKYLPKLATGEMM-------------ASFALTEPEAGSDAASLRTTAIRDGDFYVVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   V   + +    G+ + +   K+G +   T ++
Sbjct: 153 KRFITNAPQAGMFTLMARTNPANKGAGGVSAFIVEAGTPGISFGKRDKKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N          L    G    MK+L    +  A ++V+     L  A+ YA  R   
Sbjct: 213 IFENVRVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVAVAVAERMLDMALRYAAERRQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD   +I AA  +    A   D+    S E       A   K +  
Sbjct: 273 GQPIGNFQLVQAMLADSKAEIYAARCMVLDAARRRDDKLPNSTE-------ASCAKMFAT 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +M   V   A++  GG+GY+ E +I R YR+     I  G+       +   + +
Sbjct: 326 EMCGRVADRAVQIFGGAGYMSEYAIERFYRDVRLFRIYEGTTQIQQTVIAKNMLR 380


>gi|328950895|ref|YP_004368230.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451219|gb|AEB12120.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 584

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 94/442 (21%), Positives = 171/442 (38%), Gaps = 47/442 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LLR++   GL     + ++  +   +      A         +    + +      +   
Sbjct: 67  LLRKAGELGLLGVEIEEAYGGLDLPKVVSTVIAEYLAPTGGFSVSFGAHTSIGTLPLVFF 126

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    K + PK+ + E+                  LTE   G+D     ++ +   DG 
Sbjct: 127 GTEEQKKKYLPKLATGEW-------------IAAYALTEPGSGSDALGAKTRAELSPDGK 173

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+S+   +D F + A+V+G          L + S  G+     + K+G ++
Sbjct: 174 YYILNGTKQFISNAAFADLFTVFAKVDGEH----FTAFLVERSFEGVSVGPEEKKMGIKA 229

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T +L   N    +   LG++        ++  +        +V G + +L +A  YA+
Sbjct: 230 SSTRQLILENVKVPVENVLGEVGKGHKIAFNVLNVGRYKLGAGAVGGAKEALGQAARYAK 289

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI----- 395
            RH  G  +     +++ +A IA+   AA +  +R     D A    + A          
Sbjct: 290 ERHQFGQPIASFGAIRQKLARIAIKTFAAESAVYRTMGLIDAALEGKKGAEAVLKGIEEY 349

Query: 396 --MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++    + EA++  GG GYI+E  I R YR+S  N I  G+     L 
Sbjct: 350 AVEASIIKVLGSEVLDYAVDEALQIHGGYGYIQEYPIERAYRDSRINRIFEGTNEINRLL 409

Query: 454 V----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--ARFLT-- 505
           +    L    KGT    +    L+++L          L  S     E +    AR++   
Sbjct: 410 IPGMLLRRAMKGTLPLVEAAMKLQEEL----------LEPSFGEEAEGEWAKEARYVANL 459

Query: 506 EKIALASSAAALYRAGMNDIAD 527
           +K+AL ++  A  + G    A+
Sbjct: 460 KKLALMTAGLAAQKFGPRIEAE 481


>gi|291513773|emb|CBK62983.1| Acyl-CoA dehydrogenases [Alistipes shahii WAL 8301]
          Length = 555

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 98/515 (19%), Positives = 183/515 (35%), Gaps = 69/515 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE          A   ++  P++          D VE+       ++  +  GL  
Sbjct: 36  LEIAGEVCG-EVIAPNAEGVDHEGPRVVD--------DHVEYASGTVENMKAVVDAGLSG 86

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R ++ +       + A  +   A     ++       A  +    +  + + + P 
Sbjct: 87  MTLPRKYDGLNFPLICFVMANEMVARADASFENIW-GLQDCAETLNEFASEEIKQKYLP- 144

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLS 236
                                 + LTE   G+D+ A+  +     +   + L+G K F++
Sbjct: 145 -------------WVSAGATCAMDLTEPDAGSDLGAVMLKATWSEERQTWLLNGVKRFIT 191

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +  ++LA+ E G      +  L+ D    G+  +R++NK+G + + T EL F+N  
Sbjct: 192 NGDGEVSLVLARTEEGTTDARGLSMLVYDKRDGGVKVRRIENKLGIKGSPTCELVFTNAP 251

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L+GD  +     V  +     L     SV     +  E + YA  R   G  +I    
Sbjct: 252 AQLVGDRKMGLIKYVMSLMNAARLGIGAQSVGLCEAAYREGLKYAHEREQFGKPIIQFAA 311

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK-------SRSEEAA----------YARIMA 397
           +   ++++   +    AL +  A   +  K        RS EA            A    
Sbjct: 312 VSEMLSNMKAKVQGVRALLYETARFVEVYKQYGHISHERSLEAEERQEMKFYNRLADGFT 371

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K +  + A  +  +A++  GGSG++++    R YR++   +I  G+    V+  +N 
Sbjct: 372 PLVKLFSSEYANQLAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINA 431

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---------------AR 502
           + KGT   EQ+     +    +   V+T L++      E +                 AR
Sbjct: 432 VTKGT-FLEQIGRYAAESYTEAMCPVVTKLKELTVKFSEMQARVEAGDKEVCGFKDFHAR 490

Query: 503 FLTEKIA-------LASSAAALYRAGMNDIADVFL 530
            L E          LA  A           A VF 
Sbjct: 491 RLVETAGHIIITYLLARQAGEAEEYA--ASARVFC 523


>gi|195152876|ref|XP_002017362.1| GL21568 [Drosophila persimilis]
 gi|194112419|gb|EDW34462.1| GL21568 [Drosophila persimilis]
          Length = 413

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 136/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+   HPA    +RR    GL        +                        
Sbjct: 56  PRARQHDREGLHPA--EQIRRLGELGLMAVTVREEYGGSGLDYQAYAIGMEEVARGDAAV 113

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M  +      V L  + +  +D+               P  +        L+E   G
Sbjct: 114 SVAMGVNNLFLGAVQLHGSEQQKQDFL-------------VPYTQGEKIAFYALSEPGNG 160

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +A ++  +   +         W  +S  +   ++ A ++  +    +   L      
Sbjct: 161 SDASAASTTAKLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHQGITAFLTAKDVP 220

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G R+++T +L   +          V  GP E  KI +  LD   + ++ 
Sbjct: 221 GLSVGKKESKMGMRASSTCQLVLDDVQVPQCQ---VLGGPGEGFKIAMQSLDCGRIGIAA 277

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D 
Sbjct: 278 QATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTWRAAWLKDN 337

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A++ A     +C         +  + +GG GY  +     +YR +    I
Sbjct: 338 GLPITKEAAMAKLHASEAATYC-------AHQCTQILGGMGYTTDLPAEMYYRNARVTEI 390

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N + +
Sbjct: 391 YEGTSEIQRIVIANAVLR 408


>gi|158298698|ref|XP_318878.3| AGAP009783-PA [Anopheles gambiae str. PEST]
 gi|157014010|gb|EAA14306.3| AGAP009783-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 133/369 (36%), Gaps = 26/369 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++ +F P+   ++R    +GL        +             A  ++   L    L   
Sbjct: 68  EEHQFDPS---VVRALFDNGLMGIEVSDEYGGS----------ACNFMTTMLVVEELSKV 114

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +A+ V +  T  +      K+ + E   +   P      +    L+E   G+D  ++
Sbjct: 115 CPATAAFVDIHNT--LVNSLMIKLGTAE-QKSKYLPKLSQEYSGSFALSEPSAGSDAFSL 171

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K  +         W  +S +S  F+++A      G   +   + +    G    +
Sbjct: 172 KTTAKKDGNHYILNGTKMWISNSDLSGVFLIMANANPSAGYRGITTFIVEREYEGFTVGK 231

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++K+G  ++ T  L   N        LG+                +      +   +  
Sbjct: 232 KESKLGICASGTCTLHMDNVRVPEENILGEFGKGYQYAAGFLNEGRIGIGAQMIGLAQGC 291

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   I Y   R   G  L     M+  IA IA +I AA  L++  A   +      ++AA
Sbjct: 292 LDATIPYLLERKQFGSDLYSFQSMQHQIATIATEIEAARLLTYNAARLQEAGAPFLKQAA 351

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       KY+  ++A     + ++ +GG G+ ++    + YR+    +I  G+ N  +
Sbjct: 352 MA-------KYYASEVAQRTTVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEGTTNMQL 404

Query: 452 LDVLNLLEK 460
             +  +++K
Sbjct: 405 STIAKVMKK 413


>gi|119504013|ref|ZP_01626094.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine
           gamma proteobacterium HTCC2080]
 gi|119460016|gb|EAW41110.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine
           gamma proteobacterium HTCC2080]
          Length = 382

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 141/395 (35%), Gaps = 36/395 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +++AR A           P   +W++    P    L       GL C      +      
Sbjct: 14  RDMARRAFE-----KEISPHYAQWEEEHMVP--RELWNTLGAAGLLCPDVAEEYGG-AGT 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             H   A    L      G   +  + S   A  ++   TP     W P++ + E     
Sbjct: 66  TPHVTLAMIEELSYMCFGGFASAYGIHSNIIAPYLSRHGTPEQKAHWLPRMVTGEC---- 121

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                       L +TE   G+D+ +I +   +  D  + L+G K F+++ +    +++A
Sbjct: 122 ---------VGALAMTEPGAGSDVQSIRTNAVRDGDE-WVLNGSKIFITNGIHADLVIVA 171

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303
              +   G       L D    G    +   KIG  ++ T  L F++       LLG+ N
Sbjct: 172 AITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTSDTALLFFTDVRLPADALLGEAN 231

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + D      L  A  +V+    +L   + Y + R   G  +      +  +AD+ 
Sbjct: 232 KGFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKEREAFGQKIGGFQNTRFKLADVK 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            DIA   A   +    +      SEEAA  ++         C+M   V  + ++C GG G
Sbjct: 292 TDIAINRAFYEKCTEKYANEDLSSEEAAMLKLA-------SCEMQCRVADQCLQCFGGYG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y  E  I+R Y ++    I  G+   M   V   +
Sbjct: 345 YTTEYPISRFYVDARIQPIYGGTSEIMRELVARSI 379


>gi|30262357|ref|NP_844734.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47527647|ref|YP_018996.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185200|ref|YP_028452.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|65319648|ref|ZP_00392607.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|165870535|ref|ZP_02215189.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167633117|ref|ZP_02391443.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167639599|ref|ZP_02397869.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170687028|ref|ZP_02878247.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170706639|ref|ZP_02897098.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177649348|ref|ZP_02932350.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190565496|ref|ZP_03018416.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227814837|ref|YP_002814846.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229602743|ref|YP_002866690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254684931|ref|ZP_05148791.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254737378|ref|ZP_05195082.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743437|ref|ZP_05201122.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254751693|ref|ZP_05203730.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|254760212|ref|ZP_05212236.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30256988|gb|AAP26220.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47502795|gb|AAT31471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179127|gb|AAT54503.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|164713690|gb|EDR19213.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|167512308|gb|EDR87684.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167531929|gb|EDR94594.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170128370|gb|EDS97238.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170669079|gb|EDT19823.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172084422|gb|EDT69480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190563523|gb|EDV17488.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|227005385|gb|ACP15128.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|229267151|gb|ACQ48788.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 569

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  +   YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|291448832|ref|ZP_06588222.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351779|gb|EFE78683.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 381

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 141/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LR++   GL               ++  +         
Sbjct: 22  EHLAPHAVAWDQDKHFPV--DVLRKAAGLGLGGVYVREDPGGSGLSRSDGVLVFEALATG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       M+    T      + P + + E                   LTE
Sbjct: 80  CPSIAGYLSIHNMVGWMIDRYGTEDQRARYLPDLCTMEQ-------------LGSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D  Y L+G K F+S   +   +I+LA+  G  G   +   + 
Sbjct: 127 PGAGSDAAALRTRAVRDGDH-YVLTGTKQFISGAGASHLYIVLART-GEDGPRGISAFVV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +   + K+G  +  T ++           LLG+         +      L  
Sbjct: 185 ERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGRLGI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G + +L  ++ +   R   GG L+D   ++  +AD+A ++AAA AL  + A + 
Sbjct: 245 AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALVRQAAEAL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D         A A  +  + K++      +V   A++  GG GY+ E  I +  R+   +
Sbjct: 305 DR------NTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKIVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   L
Sbjct: 359 QILEGTNEIMRVMVARSL 376


>gi|226958414|ref|NP_001152980.1| isovaleryl-CoA dehydrogenase, mitochondrial isoform 2 precursor
           [Homo sapiens]
 gi|119612820|gb|EAW92414.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_b [Homo sapiens]
 gi|193783817|dbj|BAG53799.1| unnamed protein product [Homo sapiens]
          Length = 396

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 133/406 (32%), Gaps = 31/406 (7%)

Query: 59  ELLGEYVLSCTAQE-LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            LLG  V S   +  LA   +     L           + +    W  L       G+  
Sbjct: 9   RLLGWRVASWRLRPPLAGFVSQRAHSLLPVDDAINGLSEEQRQEFWKQLGNL----GVLG 64

Query: 118 SIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                 +         H +    +   +        + S    + +         + + P
Sbjct: 65  ITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLP 124

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S EY                L ++E   G+D+ ++  + +K  +         W  +
Sbjct: 125 KLISGEY-------------IGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITN 171

Query: 237 SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            P +D  I+ A+ +         +   + +    G    +  +K+G R + T EL F + 
Sbjct: 172 GPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDC 231

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 +LG  N     +     L  L  A   +  M+  L   I Y   R   G  +  
Sbjct: 232 KIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGH 291

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +M+  +AD+   + A     + +A + DE    +++             +  + A  V
Sbjct: 292 FQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKD-------CAGVILYSAECATQV 344

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             + ++C GG+GYI +  + R  R++    I  G+     L +   
Sbjct: 345 ALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 390


>gi|152996282|ref|YP_001341117.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150837206|gb|ABR71182.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1]
          Length = 589

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 82/474 (17%), Positives = 169/474 (35%), Gaps = 50/474 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIW 120
            +L     E  ++A      ++A     G R +  E   A  +    +     G      
Sbjct: 35  DLLEAILGEAGKLAEQVIAPINASGDKEGSRVENGEVIEAKGFKEAFKAYSEGGWIGLSG 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  +                   A L        S+ +   ++L  +  +   + PK+ +
Sbjct: 95  DPEYGGQGLPSYVATAVNEGVQAANLAFSLCPLLSLGAIEAISLHASAELKNLYLPKMLA 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+AAI  +     D ++ + G K F++    
Sbjct: 155 GEWAGT-------------MNLTEPAAGSDLAAIACKATPDGD-VFRIKGQKIFITWGDH 200

Query: 241 DA-----FIMLAQVE------GRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSN 284
                   ++LA++         +  F+VP+ +     E    N +    +++K+G  ++
Sbjct: 201 QMSDNIIHLVLARLPNAPDGVKGISLFIVPKFILNDLGEPAHRNDVQVVSVEHKMGIHAS 260

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F +     G+L+G  N     +  M         +  ++    +  +A+ YA+ 
Sbjct: 261 PTCVMSFGDKEGAVGYLVGQENEGIKAMFTMMNNARQGVGLQGLAISERAYQQALAYAKE 320

Query: 342 RHVS-------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEE 389
           R             +I+ P + R +  +   I A  +L +  A   D         + + 
Sbjct: 321 RKQGMNVERTARAAIIEHPDVLRMLMTMKSQIDAMRSLIYVAAVENDMSHLASGDDQQQA 380

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A   +  PI K W  + A  + + A++  GG G+IEE  +A+H R++    I  G+   
Sbjct: 381 IARTALYTPIVKGWITEQAQEITSLAVQVHGGMGFIEETGVAQHARDARILPIYEGTNGI 440

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
             +D++   L          L + +E ++       ++   D +    +    A
Sbjct: 441 QAIDLIGRKLHSDKGAAMMSLLADIEAEVAEWQTSSVSTYADKVKAVLDQAKSA 494


>gi|114799086|ref|YP_759398.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114739260|gb|ABI77385.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 391

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 132/374 (35%), Gaps = 37/374 (9%)

Query: 101 PAWH-------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           PAW         + +++   GL  +     +        H+           ++   +  
Sbjct: 39  PAWRKAGIVPREIWKKAGEMGLLGASVPEEYGGAGGDFRHEAIIIEQQQWKGIDGFGITL 98

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   A  +    T    + W PKI S               +   + +TE   G+D+  
Sbjct: 99  HNAIIAPYITAYGTEEQKQRWLPKICSG-------------DLVTAIAMTEPGAGSDLQG 145

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG----SPN 268
           + +  +   D  Y ++G K F+S+  +   I+L  + +   G   +  +  +        
Sbjct: 146 MKTTAKLDGDH-YVINGSKTFISNGQTADLILLCVKTDPTKGAKGISIICVETEAVEGAG 204

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMS 324
           G    R  +K+G  +  T EL F +        L      G V+ M+ L        +  
Sbjct: 205 GFRRGRNLDKVGQHAADTSELFFDDVRVPAAHLLGGEAGKGFVQLMQKLPQERHIIGLQG 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  +  ++ E ++Y + R   G  + D    +  +A+   +   A   +        + +
Sbjct: 265 VGMIERAIHETVNYVKGRKAFGQTIFDFQNTQFKLAEAKTEATVAKVFADHCTELLLKEE 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                       A ++KYW   +   +I E ++  GG GY++E  IA+ Y ++    I  
Sbjct: 325 -------LDASTASMSKYWISDLQCKIIDECLQLHGGFGYMDEYPIAQMYADARVQRIYG 377

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   L
Sbjct: 378 GANEVMKMLIARTL 391


>gi|148556698|ref|YP_001264280.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148501888|gb|ABQ70142.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 596

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 87/533 (16%), Positives = 183/533 (34%), Gaps = 85/533 (15%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE----RWDK--VEFHPAWHAL 106
             H+E       ++    +E A++A      L      G+     W+   V     +   
Sbjct: 28  PAHEEFTP---DLIDAVIEEAAKLA---QDVLLPINASGDLEGCVWENGVVRTPAGFKEA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-- 164
             +    G      D  +      +   +      +++       + P +T     AL  
Sbjct: 82  YAQFRDGGWCALASDPKWGGQGLPE--TVNKLVEEMISSANLSFGLYPGLTHGGTTALKA 139

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + + PK+ S  +  T             + LTE   GTD+  + ++     DG
Sbjct: 140 HASADLQERFLPKMVSGVWSGT-------------MCLTEPHCGTDLGMLRTKAVPQPDG 186

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPN 268
            + ++G+K F+S+   D       ++LA+  +   G   +   +            G  N
Sbjct: 187 SHRITGNKIFISAGDHDLSENIIHLVLARLPDAPPGVKGISLFVVPKYLPKEDGSVGPSN 246

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+    +++K+G +++AT ++ F ++ G+L+G+ N     +  M     +   +  +   
Sbjct: 247 GVSCTGIEHKMGLKASATCQMSFDDSTGWLVGEPNSGLNAMFTMMNTERVSVGVQGLGVA 306

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
             +   A+ YA+ R                  +I  P ++R +  +         LS  +
Sbjct: 307 TAAYQSAVAYAKDRIQGRALSGPKRPDLAADPIIVHPDVRRMLMTMRAYTEGCRMLSIWV 366

Query: 377 ANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A + D      +A+ R        +M P+ K     +        ++  GG GYI E  +
Sbjct: 367 ARALDAERHSPDAEVRQRAEDMTALMTPVVKALLTDLGHETAQIGIQVYGGHGYIREHGM 426

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLE----------------------KGTNLFEQL 468
            ++ R++    I  G+     LD++                          K     E++
Sbjct: 427 EQYARDARITMIYEGTNGVQALDLVGRKMPAHGGRYLRSFFHPVAAFIEQHKAVPGMEKM 486

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
              LE+  G+      TI +  ++  +E    +      + L + A    RA 
Sbjct: 487 IEALEKAFGALQLSTATIAQKGLADPEEAGAASSDYLRLLGLVAMAYLFARAA 539


>gi|328881353|emb|CCA54592.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 385

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 149/399 (37%), Gaps = 30/399 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   + + R+A     +     P    WD+ E      A++++    G         + 
Sbjct: 5   LSEEQEAVRRLAEDFVAREVT--PHAVAWDRAEEVD--RAIVKKLGAVGFLGLTIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  VA   +    ++W P++ S E  
Sbjct: 61  GSGGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVAAWGSEEQKREWLPRLASGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSP-MSDA 242
                           GLTE   G+D   + ++  +    G Y ++G K F+++   +D 
Sbjct: 119 -----------ALGCFGLTEPGTGSDAGNLATRAVRDGGSGDYVINGSKMFITNGTWADV 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+     G   V   L      GL  + +  K+G R  AT EL   +        L
Sbjct: 168 VLLFARTNDTPGHRGVSAFLVPADTPGLTRRAVHGKLGLRGQATAELVLEDVRVPAAALL 227

Query: 303 N-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M  L    +  A   V   + +L  A+ YA  R   G  +    +++  I
Sbjct: 228 GPEGKGFTVAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGKPIASYQLVQELI 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +DIA+D+ AA  L++R+A+  D  +  +  A+ A       K +  + A      A++  
Sbjct: 288 SDIAVDVDAARLLTWRVADLIDRGQDFATAASKA-------KLYASEAAVRAANNALQVF 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + +  R++   ++  G+     L +   L
Sbjct: 341 GGYGYIDEYPVGKLLRDARVMTLYEGTSQIQKLIIGRAL 379


>gi|118465055|ref|YP_881103.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166342|gb|ABK67239.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 137/377 (36%), Gaps = 26/377 (6%)

Query: 100 HPAWHALLRRSIHDGLH--CSIWD--RSFEPVVRKQAHKIRAARLYLMAQLEAGHLM--- 152
           H A+   +R+ I   L      W+  R  +      A K       +  Q     +    
Sbjct: 10  HEAFRETVRQFIDQELVPNAEKWETNRLVDRSAWVAAGKYGLIGFNMPEQYGGSGVDDFR 69

Query: 153 -------SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                    +       AL     V   +   + + E        +    + + + +TE 
Sbjct: 70  FNAVIDEEIARYGGPAPALSLQNDVVGPYFSSLSNDEQKERWLPGITTGELIVAVAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A I +   +  D  + ++G K F+SS +  D  +++ + +   G       + +
Sbjct: 130 GAGSDLAGIRTSAVRDGDD-WIINGAKTFISSGINCDLVVVVCRTDPDAGHKGFTLFVVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              +G    R  +K+G     T EL F N       LLG        +        L  A
Sbjct: 189 AGMDGFTRGRKLDKMGLHYQDTAELNFDNVRVPSANLLGKEGRGFYHLMHNLPSERLSIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +++G R +  + + YA+ R   G  +      +  +A++  ++        R   +  
Sbjct: 249 ISAIAGARETWRQTLQYAKDRKAFGQPIGSFQHNRFMLAEMDTELEIGEQYIDRCLQAVV 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + EAA A+        WC + A  VI   ++  GG GY+ E  +AR Y ++   +
Sbjct: 309 DGELTAVEAAKAKW-------WCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMT 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 362 IFGGTTEIMKDIIGRDL 378


>gi|114798575|ref|YP_759990.1| isovaleryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114738749|gb|ABI76874.1| isovaleryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 144/398 (36%), Gaps = 33/398 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ++ R    N  Q +   P     D+ +  P    LL +    GL     +  +   
Sbjct: 14  GETADMIRETVKNFAQ-NEIAPRAAEIDRTDKFP--RDLLPKMGELGLLGITVEEEWGGT 70

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H +    +   +        + S    + +      +    + PK+ S E+   
Sbjct: 71  GLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQLRRWGNDQQKARYLPKLISGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  K  D         W  ++P +D  ++ 
Sbjct: 128 ----------LGSLAMSESGAGSDVVSMKLRADKKGDHYVLNGTKMWITNAPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +   G   +   L +    G    +  +K+G R + T EL F +       + NV  
Sbjct: 178 AKTDPNGGSKGITAFLIERGFKGFSVAQKLDKLGMRGSETGELVFEDCEVP---EENVMG 234

Query: 307 GPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                 +IL+  LD     +S      M+  L   I Y   R   G  + +  +++  +A
Sbjct: 235 PVGAGARILMSGLDYERAVLSAGPTGIMQACLDVVIPYIHDRKQFGQSIGEFQLVQGKLA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + + AA A  + +A + D  ++  ++AA A         +  + A  +  +A++ +G
Sbjct: 295 DMYVQMNAAKAYVYAVAKACDRGETARKDAAGA-------ILYAAETATKLALDAIQLLG 347

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E    R  R++    I  G+       +   L
Sbjct: 348 GNGYINEYPTGRLLRDAKLYEIGAGTSEIRRWLIGREL 385


>gi|56697235|ref|YP_167600.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678972|gb|AAV95638.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 388

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 131/377 (34%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W+     P    L  ++   GL  +     +  +    AH    A    +A ++ 
Sbjct: 33  PHYEEWEAQGSFP--RDLWLKAGEMGLLGAEVPEDYGGLGGSFAHDAVIAYQGNLAGIDG 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +      +    +    K   P++ S               +   + +TE   G
Sbjct: 91  WGGGLHNSIVIPYLIHYGSEDQKKRLPPRMISG-------------DLIGAIAMTEPGAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP- 267
           +D+  I +   K  +         +  +  +++  I+ A+ E +VG   +   L +    
Sbjct: 138 SDLQNIKTTAVKDGNHYRISGSKTFITNGALANMIIVAAKTEPKVGGRGISLFLVETDGL 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIM 323
            G    R  +K+G +SN T EL F +        L      G V+ M+ L    L   + 
Sbjct: 198 EGFRRGRNLDKLGMKSNDTSELFFDDMRVPASALLGAEEGQGFVQMMQQLPQERLLIGVY 257

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+ +   L   ++Y   R   G  L D    +  +A+ A +   A           D  
Sbjct: 258 AVARIERVLRVTLNYVAERSAFGKKLADFQNTQFVLAECATEATIAKTF-------LDAC 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S   E       A + KYW   +   +I   ++  GG G + E  + R YR++    I 
Sbjct: 311 ISEHLEGNLTTEKASMAKYWLTDLQAKIIDRCLQLFGGYGVMSEYPMERMYRDNRIERIY 370

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   M L +   L +
Sbjct: 371 AGTNEIMKLVIARGLLR 387


>gi|325925878|ref|ZP_08187247.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325543709|gb|EGD15123.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 387

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 148/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLLGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    +    + + PK+
Sbjct: 60  VEDAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASHEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRFVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI E    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|196008563|ref|XP_002114147.1| hypothetical protein TRIADDRAFT_58314 [Trichoplax adhaerens]
 gi|190583166|gb|EDV23237.1| hypothetical protein TRIADDRAFT_58314 [Trichoplax adhaerens]
          Length = 418

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 135/378 (35%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D  +      +  R+    GLH      S        ++      +  +A+   
Sbjct: 58  PYAAEIDAKDEFTELRSFWRKLGDMGLHGITVPESEGGAG--GSYMDHCITIEELARASP 115

Query: 149 GHLMSPSVTSASMV---ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              MS +V S   +              + PK+ S EY                L ++E 
Sbjct: 116 SVGMSYAVHSNMCINQLVRNGNAEQKAKYLPKLISGEY-------------IGALAMSEP 162

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+ ++  + +K  +         W  + P++D  I+ A+ +       +   + + 
Sbjct: 163 NAGSDVMSLRLRAEKQGNHYVLNGTKFWITNGPVADIIIVYAKTDPAAHQHGISAFIVET 222

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              G    +  +K+G R + T EL F +        L      V+ +  +  LD    ++
Sbjct: 223 KTPGFSIAQKLDKLGLRGSETGELVFEDCKIPEENILGRVNKGVQVL--MSGLDLERGTL 280

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +G  + + +++      Y   R      +    +++  +AD+   +    +  + +  +F
Sbjct: 281 AGGAIGIMQSVVDVVYPYVHTREQFDQKIGQFQMIQSKLADMYNTLNLCRSYLYNVVRAF 340

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    RS + A A I+         + A  +  + ++C+GG+GYI +    R  R++   
Sbjct: 341 DRGVIRSADCAAAGIL-------VGENATQMALDGIQCLGGNGYINDYPTGRMLRDAKIF 393

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L V   +
Sbjct: 394 EIAGGTQEIRKLIVGRSI 411


>gi|94985281|ref|YP_604645.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555562|gb|ABF45476.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 392

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 126/359 (35%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
              LR     GL  +     ++                  A      ++S        M+
Sbjct: 49  REQLRGLAELGLLGATVPEGWDGAGLDSVTYALCLEEIAAADASVAVIVSVQNGLPEQMI 108

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+ +        LTE   G+D A++  + ++  
Sbjct: 109 LKYGTDAQRESYL-------------RPLARGEHLGAFCLTEPGAGSDAASLCLRAEREG 155

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  S   +D ++++A+  G  G   +   +      GL + R + K+G  
Sbjct: 156 DEWVLHGSKAWITSGGQADTYLVMART-GGPGARGISCFIVPKDMPGLSFGRPEEKLGLH 214

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T  + F          +     G V  +  L    +  A+ ++   R +L  A  YA
Sbjct: 215 AAHTTTVTFDGVRVPAENMVGEEGQGLVIALASLDAGRIGIAMQALGIARAALEHAARYA 274

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L +   +   +A +A  I +A  ++ + A   D+ +   +EA+ A+++A  
Sbjct: 275 SEREQFGRPLKEFEGVSFKVARMAARIESARLVALKAAWLKDQGRPYGKEASIAKLLA-- 332

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 + A     +A++  GG+GY  E  + R YR++    I  G+     L +   +
Sbjct: 333 -----SETAVDCARDAIQIFGGNGYSREYPVERLYRDAKVTEIYEGTSEIQQLVISRAV 386


>gi|309779044|ref|ZP_07673812.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308922204|gb|EFP67833.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 377

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 133/391 (34%), Gaps = 41/391 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A       P    +   G   D+V          R     GL   I    +         
Sbjct: 18  AFATERLAPNAAQWDRDGALPDEVV---------REMGELGLLGMIVPAEWGGSYTDYVA 68

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              A          +  +MS   +      L   T      + P + +            
Sbjct: 69  YALALEEVAAGCAASATMMSVHNSVGCGPILKFGTEAQKARYLPDLATG----------- 117

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
                    LTE   G++   + ++   + DG + L+G+K F+++   +D  I+ A  + 
Sbjct: 118 --RAIGAFCLTEPHAGSEANNLRTRAV-LRDGKWVLTGNKQFVTNGARADIAIVFAVTDP 174

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +   +      G    R ++K+G R++ T  +   +       + N+     E 
Sbjct: 175 DAGKRGISAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVP---EENLLGERGEG 231

Query: 312 MKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +KI +       +  A  +V   R +   A +YA  R   G  L +   +   +AD+A  
Sbjct: 232 LKIALSNLEGGRIGIAAQAVGIARAAFDAARNYANERIQFGKALREHQTIANMLADMATR 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A      K    E       A   K +  ++A  + + A++  GG GY+
Sbjct: 292 LNAARLLVHHAARLRSADKPCLSE-------ASQAKLYASELAEEICSNAIQIHGGYGYL 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + ++ RHYR++    I  G+     + +  
Sbjct: 345 ADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|171463914|ref|YP_001798027.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193452|gb|ACB44413.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 595

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 104/504 (20%), Positives = 204/504 (40%), Gaps = 74/504 (14%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--------DK---------VEF 99
           EL  L + V   +  E     +     L       +          D+         V  
Sbjct: 16  ELAGLSDVVAYPSYVEAGADVDLAPAILEESAKFNQDVVAPLNWAGDQNPSSLKDGVVTT 75

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +     +    G    I    F      +   I  A L ++        + P +T  
Sbjct: 76  TPGFKNAFEQYAAAGWQGVIHPVEFGGQGLPK--LISTACLEMVNAANLSFALCPLLTDG 133

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  +P + + + PK+ S E+  T             + LTE + G+D++ + S+
Sbjct: 134 AIEALLTAASPALQEQYVPKMISGEWTGT-------------MNLTEPQAGSDLSMVCSR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
                DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 181 AVPEGDGTYKIFGTKIFITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVVPKFLVNAD 240

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K+G +++ T  L+F +     G+L+G+ N     +  M      
Sbjct: 241 GSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRGLEYMFVMMNAARF 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS----GGI----LIDQPVMKRAIADIALDIAAAT 370
              +  ++    +  +A+ YA+ R  S    G      +I QP +KR +  +   I A+ 
Sbjct: 301 AVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKRMLMTMRAYIEASR 360

Query: 371 ALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL++  A+++D   +  +EA      A    + PI K +  +M+  V +  ++  GG G+
Sbjct: 361 ALAYYAASAYDAQHAAPDEAVRKANQAVYEFLVPIVKGFSTEMSIDVASLGVQVHGGMGF 420

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL---EQDLGSS 479
           IEE   A+HYR++   +I  G+      D++    +  G  + ++L   +   E+DL +S
Sbjct: 421 IEETGAAQHYRDARILTIYEGTTAIQANDLIGRKTVRDGGAIAKELSQRIAATEKDLAAS 480

Query: 480 GKKVITIL--RDSISLCKEDKGLA 501
           G      +  + +++    D+ +A
Sbjct: 481 GSADAKAMLKQHTLARAAFDQAVA 504


>gi|229096830|ref|ZP_04227800.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
 gi|228686672|gb|EEL40580.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29]
          Length = 569

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 155/424 (36%), Gaps = 36/424 (8%)

Query: 94  WDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGH 150
            + +E H       L  ++   GL        +    + K    + A ++          
Sbjct: 51  IENIEKHNYKVSRQLFEKAGELGLLGIEVPEDYGGFELGKTVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+         +   + + +  
Sbjct: 157 ALSAKTSAILNEEGTAWKLNGEKQWITNAHMADVYVVFAKTN-----KGMTAFIVERACE 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIH 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            S+E    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKE 496
            I  G+     L V  +L K     E     ++        + I     +L+ S+    +
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQIEQIEDTEVEIDIATVERNHRYILLAKKLLKQSLKTLSK 451

Query: 497 DKGL 500
             GL
Sbjct: 452 TPGL 455


>gi|187926160|ref|YP_001892505.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665648|ref|YP_002984007.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187727914|gb|ACD29078.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867675|gb|ACS65335.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 377

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 133/391 (34%), Gaps = 41/391 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A       P    +   G   D+V          R     GL   I    +         
Sbjct: 18  AFATERLAPNAAQWDRDGALPDEVV---------REMGELGLLGMIVPAEWGGSYTDYVA 68

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              A          +  +MS   +      L   T      + P + +            
Sbjct: 69  YALALEEVAAGCAASATMMSVHNSVGCGPILKFGTEAQKARYLPDLATG----------- 117

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
                    LTE   G++   + ++   + DG + L+G+K F+++   +D  I+ A  + 
Sbjct: 118 --RAIGAFCLTEPHAGSEANNLRTRAV-LRDGKWVLTGNKQFVTNGARADIAIVFAVTDP 174

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +   +      G    R ++K+G R++ T  +   +       + N+     E 
Sbjct: 175 EAGKRGISAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVP---EENLLGERGEG 231

Query: 312 MKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           +KI +       +  A  +V   R +   A +YA  R   G  L +   +   +AD+A  
Sbjct: 232 LKIALSNLEGGRIGIAAQAVGIARAAFDAARNYANERIQFGKALREHQTIANMLADMATR 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L    A      K    E       A   K +  ++A  + + A++  GG GY+
Sbjct: 292 LNAARLLVHHAARLRSADKPCLSE-------ASQAKLYASELAEEICSNAIQIHGGYGYL 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + ++ RHYR++    I  G+     + +  
Sbjct: 345 ADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|310799839|gb|EFQ34732.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 446

 Score =  263 bits (673), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 137/364 (37%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
           A++ +    GL        +          I               L+    T   + + 
Sbjct: 103 AIVEQLFEQGLMGVEIPEEYGGAGMNFTSAIIGIEELARVDPSVSVLVDVHNTLVNTAII 162

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + ++ + + PK+               T+      L+E   G+D  A+ ++  K  +
Sbjct: 163 KWGSSQLKQRFLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATKTEN 208

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +S  +D FI+ A ++   G   +   + + +  G    + + K+G ++
Sbjct: 209 GYKINGSKMWITNSKEADFFIVFANLDPAKGYKGITAFIVEKNTKGFSIAKKEKKLGIKA 268

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIH 337
           ++T  + F +     +   N+        K  I  L+   + ++     LA      A+ 
Sbjct: 269 SSTCVINFDDV---EIPRENLLGEEGSGYKYAIGLLNEGRIGIAAQMTGLALGSWENAVK 325

Query: 338 YA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           Y    R   G ++ +   M+  IA    +IAAA AL +  A   +   +   +AA A   
Sbjct: 326 YVWNDRKQFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGDNFVMDAAMA--- 382

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  ++A  V   A+E +GG G++ +    + +R+S   +I  G+ N  +  +  
Sbjct: 383 ----KLYASQVAGRVSGLAIEWMGGMGFVRDGPAEKFWRDSKIGAIYEGTSNIQLNTIAK 438

Query: 457 LLEK 460
           LL+K
Sbjct: 439 LLQK 442


>gi|118464122|ref|YP_882794.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165409|gb|ABK66306.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 386

 Score =  263 bits (673), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKAKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNPDFRYNTIITEETTR 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W PK  + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKQRWLPKFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMEGFERGRHLDKIGLDAQDTAELSFTDVHVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+M+ + M   L + + Y + R   G  +      +  +A++A +      +       
Sbjct: 253 IAVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSRFVLAELATEATVVRMMVDEFVRL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + K  +E+AA A+        +  +    +I   ++  GG GY+ E  +AR Y ++  
Sbjct: 313 HLDHKLTAEQAAMAKW-------YSTEKQVHLIDRCLQLHGGYGYMREYPVARAYLDARV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRSL 384


>gi|116049479|ref|YP_791718.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390097|ref|ZP_06879572.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584700|gb|ABJ10715.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 382

 Score =  263 bits (673), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/362 (21%), Positives = 145/362 (40%), Gaps = 24/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++ E  P    L  ++   G+    +  ++            AA   LM        
Sbjct: 32  DEWEEAEEFP--RELYLKAGAAGILGIGYPEAYGGSCEGDLFAKVAASEELM------RC 83

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  + +      +  P V K   P     E        + +    + L +TE  GG+D+
Sbjct: 84  GSGGLVAGLGSLDIGLPPVVKWARP-----EVRERVVPAVLRGEKIMALAVTEPSGGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + ++  +  D  Y +SG K F++S +   +  +A   G  G   +  LL +    G  
Sbjct: 139 ANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAGISLLLVEKGTAGFS 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G  ++ T EL F +       L+G  N     +        L  A+M+    
Sbjct: 198 VGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQSERLALAVMANMTA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +++L E++ +AR R   G  +    V++  +A++A  +  +   ++R A      KS  +
Sbjct: 258 QLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTYRQAAKMAAGKSVIK 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   SI  GS  
Sbjct: 318 E-------ISMAKNFATDVADRLTYDAVQVLGGMGYMRESLVERLYRDNRILSIGGGSRE 370

Query: 449 AM 450
            M
Sbjct: 371 IM 372


>gi|164660180|ref|XP_001731213.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966]
 gi|159105113|gb|EDP43999.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966]
          Length = 446

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 19/294 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLS 236
           ++ E+      P+  T       L+E   G+D  A+ +  +K  DG          W  +
Sbjct: 164 YANEHLQKKYMPILSTEKLGSFCLSEPNSGSDAFAMKTTVKKSDDGSHYIINGSKMWITN 223

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S  ++ FI+ AQ +   G   +     +    G+   + ++K+G R+++T  + F     
Sbjct: 224 SAEAEFFIVFAQGDASKGYKGISAFAVEKDM-GVEIAKKESKLGIRASSTCTVNFDEVKV 282

Query: 297 FLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
                 N+     +  KI I  L+   + +    V LA+     A+ Y   R   G  + 
Sbjct: 283 PA---ENLIGEEGKGYKIAIEILNEGRVGIGAQMVGLAQGAFDRALAYTFERQQFGKPIA 339

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               M+  +A IA +I AA  + +  A   +E +  +++AA A       K +  + A  
Sbjct: 340 KFQGMQFQMAQIATEIEAARLMVYNAARLKEEGRPFTKQAAMA-------KLYSSQAAER 392

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
               A+E  GG G+  E+ I +++R+S   +I  G+ N  +  + NL  K   L
Sbjct: 393 AAGRAIEWCGGQGFTREQGIEKYWRDSKIGAIYEGTSNIQLNTIFNLTAKEQGL 446


>gi|89053633|ref|YP_509084.1| isovaleryl-CoA dehydrogenase [Jannaschia sp. CCS1]
 gi|88863182|gb|ABD54059.1| isovaleryl-CoA dehydrogenase [Jannaschia sp. CCS1]
          Length = 386

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 24/359 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL     D           AH +    +  ++        + S    + + 
Sbjct: 45  ELWAEMGELGLLGITVDEEHGGAGMGYLAHTVAVEEISRVSASIGLSYGAHSNLCVNQIK 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P++ S ++                L ++E   G+D+ +++ + +K +D
Sbjct: 105 LNGTPEQKAKYLPRLVSGDH-------------VGALAMSEAGAGSDVVSMSLRAEKRND 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   L +   +G       +K+G R 
Sbjct: 152 RYLLNGTKYWITNGPDADTLVVYAKTDPDAGSRGITAFLIEKEMHGFSTSPHFDKMGMRG 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L      V  +   +  +  ++S   +  M   L E + Y +
Sbjct: 212 SNTAELVFEDVEVPFENVLGEEGRGVAVLMSGLDYERVVLSGVNIGIMAGCLDEVMPYLK 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D  +M+  IAD+   + +A A ++ +A + D  +   ++AA         
Sbjct: 272 ERKQFGQPIGDFQLMQGKIADMYTSMNSARAYAYEVAKACDRGQVTRQDAA-------AC 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             +  +    V  +A++ +GG+G++ +  ++R +R++    I  G+     + V   L 
Sbjct: 325 VLYASEEGMKVAHQAVQAMGGAGFMNDSVVSRMFRDAKLMEIGAGTSEIRRMLVGRELM 383


>gi|308376237|ref|ZP_07438107.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008]
 gi|308379622|ref|ZP_07486936.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010]
 gi|308351808|gb|EFP40659.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008]
 gi|308356543|gb|EFP45394.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010]
          Length = 551

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 133/506 (26%), Positives = 216/506 (42%), Gaps = 52/506 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +     L  +GE       +  A   + N P+L  Y   G    +V    ++    R  I
Sbjct: 15  AFAEPHLTRIGELTGGPVTR-WAEETDRNPPRLERYDRWGHDISRVVLPESFIQSKRAVI 73

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTP 168
                     R        +      A  YL+ Q +   A  L +      S+V     P
Sbjct: 74  EARQAV----RDDAARAGVKPSLALFAADYLLNQADIGMACALATGGNMVRSLVTAYAPP 129

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            V +    K+ S E+D                 LTE+ GG+D+ A+ +   +  D ++ L
Sbjct: 130 DVREFVLGKLNSGEWDGE-----------AAQLLTERAGGSDLGALETTATRSGD-VWLL 177

Query: 229 SGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +G KWF S+   +AF++LA+ EG       V  FLV R   DGS NG+  +RLK+K+G R
Sbjct: 178 NGFKWFASNCAGEAFVVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTR 237

Query: 283 SNATVELEFSNTFGFLLGDL---------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           S A+ E+EF +   FLL                  + ++   + L +A  ++   R +L 
Sbjct: 238 SVASGEIEFVDAEAFLLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALV 297

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E++ YA +R   GG LID+P+M+R +A++ +D+ AA A+ F    + +  + R      A
Sbjct: 298 ESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDVEAALAMVFDGFGAANHRQPRCLPQRIA 357

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
               P+TK   C++   V ++A+E  GG+GYIE   +AR  R++  N+I  G  N + LD
Sbjct: 358 ---VPVTKLKTCRLGITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLD 414

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGK--------KVITILRDSISL---CKEDKGLAR 502
           V   +E+ T   E L + L   +  S          + I  L  +I+           AR
Sbjct: 415 VRRGIEQ-TRAHETLLARLRDAVSVSDDDDTTRLVSRRIEDLDAAITAWTKLDRQLAEAR 473

Query: 503 F--LTEKIALASSAAALYRAGMNDIA 526
              L + +    + A L      + A
Sbjct: 474 LFPLAQFMGDVYAGALLTEQAAWERA 499


>gi|282866161|ref|ZP_06275208.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282558945|gb|EFB64500.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 390

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 141/423 (33%), Gaps = 43/423 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD     +    P+   ++L  L   + S              P+       G       
Sbjct: 2   SDRAPQPVERRLPTEESRQLVALVRDIASKEI----------APRAAEEEEAGR------ 45

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    +       GL    +D +     +     ++       A+L  G  +S    +
Sbjct: 46  -FP--REVFTLLSASGLLALPYDSASGGGDQPYEVYLQVLEELAAARLTVGLGVSVHSLA 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +A   T        P + +               +     L+E   G+D A++ ++ 
Sbjct: 103 CHALANFGTGAQRAAHLPAMLTG-------------GLLGAYCLSEPASGSDAASLRTKA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W     ++D   +LA+  G  G   +   L  G   GL     + K
Sbjct: 150 VRDGDDWVLTGTKAWITHGGIADFCTVLART-GVEGPRGITAFLVPGDAEGLGAAPPEKK 208

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G + + T +L F          +GD                L  A  +V   + +L EA
Sbjct: 209 MGMKGSPTAQLHFDGVRIGDDRRIGDEGQGFAIALSALDSGRLGIAACAVGVAQAALDEA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  + D   ++  +AD+A  I A  AL    A   D     S +AA A  
Sbjct: 269 VGYATGRRQFGRPVADFQGLRFMLADMATRIEAGRALYLEAARLRDAGLPFSRQAAMA-- 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +C  +A  V  +A++ +GG GY  +  + R  RE+    I+ G+     + + 
Sbjct: 327 -----KLFCTDVAMQVTTDAVQVLGGYGYTLDFPVERLMREAKVLQIVEGTNQIQRMVIA 381

Query: 456 NLL 458
             L
Sbjct: 382 RHL 384


>gi|226361779|ref|YP_002779557.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240264|dbj|BAH50612.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 384

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/413 (18%), Positives = 139/413 (33%), Gaps = 43/413 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S    +   LGE      A+EL               P  +++++  +      +  ++ 
Sbjct: 9   SWRDSDTTALGELADKFFAREL--------------TPHRDKFEQQHYVD--RDVWTKAG 52

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH +        A          S   A  +    T    
Sbjct: 53  ELGLLCCSIPEEYGGGGGTFAHDLAVVEAQARALDTGFGNTVHSGIVAHYILAYGTEEQR 112

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P + +                   + +TE   G+D+  I +   +  D  Y ++G 
Sbjct: 113 RRWLPGMATG-------------QTITAVAMTEPGAGSDLKNIKTTALRDGDH-YVINGA 158

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+S+   +D  +++A+ +   G   V  ++ +     G    R+ +K+G     T EL
Sbjct: 159 KTFISNGSQADLIVVVAKTDPAAGAKGVSLIVVETAEAPGFTRGRILDKVGQHGADTSEL 218

Query: 290 EFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F +        L G+     G +        L   + +V+ M  ++ E + Y + R   
Sbjct: 219 SFEDVRVPVANLLGGEEGRGFGQLMTQLAQERLLIGVTAVATMEAAVTETVEYTKSRSAF 278

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D    K  +A+      AA           D    R          A + K+W  
Sbjct: 279 GQSIFDFQNTKFVLAECQTVAHAARVF-------IDSCIERHLRGNLDTTTAAMAKWWLT 331

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +    VI   ++  GG GY+ E  IAR Y ++    I  GS   M   +   L
Sbjct: 332 EQQCQVIDRCVQLFGGYGYMREYPIARMYADARVQKIYGGSNEIMKDLIARSL 384


>gi|111221420|ref|YP_712214.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111148952|emb|CAJ60631.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 387

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 123/382 (32%), Gaps = 26/382 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E  P            G        S+                    
Sbjct: 27  KDIAPFAAEVDEHERFPD--QAREALDRAGFAAVHVPESYGGQGADSVATCIVIEEVARV 84

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +   +  + L  +  + +   P + S E               I   L+E
Sbjct: 85  CASSSLIPAVNKLGSMPIILAGSEELKRLVLPSLASGE-------------AMISYALSE 131

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLL 262
           +  G+D A++ ++ +   D         W  ++ +S  + ++A  +         +   +
Sbjct: 132 REAGSDTASMRTRARLDGDHWVLDGTKTWITNAGVSTWYTVMAVTDPHATKKADGISAFV 191

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G      + K+G + + T E+  +        ++G+                  
Sbjct: 192 VHRDDPGFEVGSKERKLGIKGSPTREIHLTGCTIPADRIIGEPGTGLRTALATLDHTRPT 251

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
               +V   + +L  A+ Y ++R   G  + D   ++  +AD+ + I AA  L +  A  
Sbjct: 252 IGAQAVGIAQGALDAALAYVKQRRQFGRAIADNQAVQFMLADMGMKIEAARHLVYVSAAR 311

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +           ++   K +   +A  V  +A++  GG+GY  +  + R  R++  
Sbjct: 312 AERGEPN------LGFVSAAAKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMRDAKI 365

Query: 440 NSILLGSGNAMVLDVLNLLEKG 461
             I  G+     + +   L KG
Sbjct: 366 TQIYEGTNQVQRVVMSRALLKG 387


>gi|58262444|ref|XP_568632.1| acyl-CoA oxidase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118936|ref|XP_771971.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254575|gb|EAL17324.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230806|gb|AAW47115.1| acyl-CoA oxidase, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 429

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 126/308 (40%), Gaps = 33/308 (10%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++ L     + + W P +               T       L+E   G+D  A+ +  + 
Sbjct: 143 VIRLYGNAEIQQKWLPDL--------------ATKKVGSFCLSEPNAGSDAFALQTTAKL 188

Query: 221 I--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               D         W  +S  ++ F++ A V+   G   +   +      G+   + + K
Sbjct: 189 DSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGITCFIMSKDM-GVEIAKKEAK 247

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE--- 334
           +G R+++T  L F +     +   NV     +  KI I  L+   + ++   + LA+   
Sbjct: 248 LGIRASSTCLLNFDDVK---IPKENVVGEIGKGYKIAIEILNEGRIGIAAQMIGLAQGAF 304

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             ++ YA +R   G  + +   M    A++A +I AA  L++  A   +E +  ++EAA 
Sbjct: 305 EKSLEYAYQRKQFGKPVGEFQGMSFQFAEVATEIEAARLLTYNAARLKEEGRPFTKEAAM 364

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+  A +       +A      A+E  GG G++ E  + +++R+S   +I  G+ N  + 
Sbjct: 365 AKYYASV-------IAQKAAGSAIEWAGGQGFVREVGLEKYWRDSKIGAIYEGTNNIQLD 417

Query: 453 DVLNLLEK 460
            +   L K
Sbjct: 418 TIAKFLRK 425


>gi|297563091|ref|YP_003682065.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847539|gb|ADH69559.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 380

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 33/371 (8%)

Query: 100 HPAW-------HALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHL 151
           HP W         +  R+   GL        +     R   +          A+     +
Sbjct: 29  HPEWERDGIVPREVWTRAGEVGLLGHGVPEEYGGTGLRDFRYNTIVNEEICRARASGLGV 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +   A  +  +T     + W P   S E             +   + +TE   G+D+
Sbjct: 89  TLQNDVMAPYMVDLTDEEQKRRWLPGFASGE-------------LITAIAMTEPGAGSDL 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             I +   +  D  Y ++G K F+++ + +D  I++A+ +   G      +  +    G 
Sbjct: 136 QGIATSAVRDGDE-YVVNGSKTFITNGVNADLVIVVARTDPDAGAQGFSLIAVERGAAGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
              R  +KIG ++  T EL F +        +     G V  M+ L    L  A  +V+ 
Sbjct: 195 TRGRNLDKIGMKAQDTAELFFDDVRVPAANLIGREGGGFVHLMENLPQERLSIATCAVAS 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L   I Y R R   G  +      +  +A++A ++  A     R     +  +   
Sbjct: 255 ADAVLQHTIAYCRERTAFGRPIGRFQNTRFVLAELATEVDIARTYVDRGIGLLNRGELTV 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+AA A+        W  ++   V+   ++  GG GY+ E  +AR ++++   +I  G+ 
Sbjct: 315 EDAAMAKW-------WTTELCNKVVDRCLQLHGGYGYMMEYPVARAWQDTRVQTIYGGTT 367

Query: 448 NAMVLDVLNLL 458
             M   V   L
Sbjct: 368 EIMKEIVGRGL 378


>gi|295402212|ref|ZP_06812169.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112297|ref|YP_003990613.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|294975707|gb|EFG51328.1| acyl-CoA dehydrogenase domain protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217398|gb|ADP76002.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 402

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 133/374 (35%), Gaps = 36/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  +     ++L+R     L        +  +     +   A     + + + 
Sbjct: 28  PYIKEWDERGYFE--PSILKRLAELNLMGVCIPEKYGGMGMD--YNSLAIVCEELERGDT 83

Query: 149 GHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K        LTE 
Sbjct: 84  AFRTAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQAKGEKIGAFALTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A+I++   +  D         W     ++D FI+ A  +       +   + + 
Sbjct: 131 NAGSDVASISTTAVRDGDDYILNGQKTWISLCDIADHFIVFAYTDKSKKHRGISAFIVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
           +  G   + +K K+G R+  T EL F N         N+     E  KI +  LD+   +
Sbjct: 191 TMPGFSSKAIKGKLGIRAGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSALDNGRFT 247

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L +++   
Sbjct: 248 VAAGAVGLIMACLEASIKYCHERKTFGKEIGRHQLVQQMIAKMEAGLQISRLLVYKVGFL 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++ +  + EA+ A+ +A       C  A     +A++  G  GY  E  + R+ R S A
Sbjct: 308 KNQGRRTTREASLAKWIA-------CDFANQAADDAVQIHGAYGYSNEYPVERYLRNSKA 360

Query: 440 NSILLGSGNAMVLD 453
             I  G+     + 
Sbjct: 361 PVIYEGTREIHTIM 374


>gi|110633080|ref|YP_673288.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110284064|gb|ABG62123.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 591

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/521 (18%), Positives = 187/521 (35%), Gaps = 67/521 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDG 114
           +E L   ++     E AR A      L       G R +   V     W AL RR    G
Sbjct: 27  VEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVEGARLENAVVTTPKGWPALYRRWCEGG 86

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
            +       +          + A  ++  A +      + ++ +   +    T  + + +
Sbjct: 87  WNALAAPTRWGGQGLPTMLSVAALEMWNSASMAFALGPTLTMGAVEALERHATDALRQTY 146

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             K+ S E+  T             + LTE + G+D+ A+ ++ ++  DG Y + G K F
Sbjct: 147 MEKLVSGEWMAT-------------MNLTEPQAGSDLGALRTRAERAGDGTYRIFGQKIF 193

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           ++    D       ++LA++         +  FLVP+ L       G  N +    +++K
Sbjct: 194 ITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLGPRNDVFCASIEHK 253

Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +G  ++ T  + + +          G+L+G+ N     +  M     L   +  V+    
Sbjct: 254 LGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNARLAVGMEGVAVAEA 313

Query: 331 SLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YA+ R               +   P +KR +  +      + A+++  A++ D
Sbjct: 314 AYQKALAYAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEISRAITYSCAHAVD 373

Query: 382 EA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            A     + R+     A ++ P+ K +         +  ++  GG G+IEE   A +YR+
Sbjct: 374 MARLAEPERRTHWQERANLLTPVAKAFATDGGVEAASLGIQVHGGMGFIEETGAAVYYRD 433

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-----------GSSGKKV 483
                I  G+       L +  L + G +      S L +D+             +G  +
Sbjct: 434 IRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRGSNMPEFAEAGMAL 493

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
              L D     +    L      +IAL  +   L    +  
Sbjct: 494 TAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAA 534


>gi|299536306|ref|ZP_07049619.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis
           ZC1]
 gi|298728292|gb|EFI68854.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis
           ZC1]
          Length = 594

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 90/459 (19%), Positives = 175/459 (38%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H   H   LL+ +   GL  +     +E +   +      A    +A   +   
Sbjct: 53  VENLEHHEFEHSVRLLKSAGELGLLGADVPEEYEGLGLDKVSSALIAEKMSVAGGFSITH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L       K + PK+ S E             +     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGNEDQKKKYLPKLASGE-------------LIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +    G  Y L+G K W  ++  +D F++ A+++G          + + + NG
Sbjct: 160 LGAKTTAKLNEAGTHYILNGEKQWITNAGFADVFVVYAKIDGDK----FSAFIVERAYNG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G +S++T  L   +    +   L  +  G +    IL        + ++ 
Sbjct: 216 VSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGEIGRGHIIAFNILNIGRYKLGVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
           G + +L  AI Y  +R      L D  + K  ++ +A  + A+ +L++R    F++    
Sbjct: 276 GSKRALELAIQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGLFEDRLSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    K  +   A   I   I K +  +    +  EA++  GG G++ E  + R Y
Sbjct: 336 LSLEEQKQGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAEYEVERIY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     + V            L LL+   NL ++L   + +++G+    
Sbjct: 396 RDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPEEIGTEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                        ++K L +   +KIA+ ++  A  R G
Sbjct: 454 -----------LAQEKYLVKN-AKKIAVLAAGLAAQRFG 480


>gi|302533579|ref|ZP_07285921.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442474|gb|EFL14290.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 384

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 146/398 (36%), Gaps = 29/398 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   + + R+A   T +     P    WD+ E      +++++    G         + 
Sbjct: 5   LSEEQEAVRRLARAFTDR--EITPYAAEWDRAESVD--RSIVKKLGDLGFLGLTVPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                    +               ++S S+   A  VA   T    + W P++ S E  
Sbjct: 61  GSGGDHLSYVLVTEELGRGDSAVRGIVSVSLGLVAKTVAAWGTEEQKRSWLPRLCSGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D  A+T++  +  D         +  +   +D  +
Sbjct: 119 -----------ALGCFGLTEPGTGSDAGALTTRAVREGDAYVISGSKMFITNGTWADVVL 167

Query: 245 MLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           + A+++  + G   +   L      GL  + +  K+G R  AT EL            L 
Sbjct: 168 LFARIDPAIPGHRGISAFLVPADSPGLTRREVHGKLGLRGQATAELTLDAVRVPASAMLG 227

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    M  L    +  A   V   + +L  A+ YA RR   G  +    +++  IA
Sbjct: 228 PEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAAVSYAARREQFGKPIAHHQLVQELIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           DI++D+ AA  L++R+A+  D  +  + E+          K +  + A    + A++  G
Sbjct: 288 DISVDVDAARLLTWRVADLIDRGRPFATES-------STAKLFASEAAVRAASNALQVHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY++E    +  R++   ++  G+     L +    
Sbjct: 341 GYGYVDEYPAGKLLRDARVMTLYEGTSQIQKLLIGRAR 378


>gi|228968471|ref|ZP_04129459.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228791177|gb|EEM38791.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 241

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 16/251 (6%)

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + S+  K  D         +  +   +  +I+ A      G   +   + +    GL   
Sbjct: 1   MKSRAVKKGDHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISAFIVEKDTPGLIIG 60

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332
           + ++K+G   + TV+L F +         N+     +  K+ +  LD   + +    + +
Sbjct: 61  KDEHKMGLLGSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGI 117

Query: 333 AEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AEA     I YA+ R   G  +  Q  +   +AD+A  + AA  L +R A+   +     
Sbjct: 118 AEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCG 177

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E       A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+ 
Sbjct: 178 KE-------ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTS 230

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 231 EIQKLVISRAL 241


>gi|328470425|gb|EGF41336.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 389

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 135/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P     D     P+   L       GL        +    +   AH +    +   
Sbjct: 29  EHIAPIAADIDHYNQFPSH--LWPLLGEMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPTQREKYLPKLVDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EVNSGSDVVSMQLKAEDKGDHFLLNGTKMWITNGPDADVVVVYAKTDANAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           + S  G    +  +K+G R + T EL F+N        L      VE +        +  
Sbjct: 194 ERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  +AD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMALDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|300310835|ref|YP_003774927.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gi|300073620|gb|ADJ63019.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 594

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 117/552 (21%), Positives = 211/552 (38%), Gaps = 81/552 (14%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M+      D LF +N+      +N       L       P      LE   ++  S    
Sbjct: 1   MSYTAPVKDMLFVMNELAGLAAVN------ALPGCEDATPETAEAILEENAKFC-SEVVA 53

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            L   A+             +   KV   P +    R+    G         F      +
Sbjct: 54  PLNHSADKEP------SSWAD--GKVTTSPGFKEAFRQFGEAGWQGVQHPVEFGGQGLPK 105

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKA 189
              +    + ++        + P +T  ++ ALMT  T +  + +     S ++  T   
Sbjct: 106 --LLATPCIEMLNSANLSFALCPLLTDGTIEALMTAGTQQQKETFIANFISGKWTGT--- 160

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244
                     + LTE + G+D+A + ++     DG Y L G K F++    D       +
Sbjct: 161 ----------MNLTEPQAGSDLALVRTRAVPEGDGTYKLFGTKIFITYGEHDMAENIVHL 210

Query: 245 MLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +LA+          +  F+VP+ L +     G+ N +    +++K+G +++ T  L+F +
Sbjct: 211 VLARTPNAPEGVKGISLFIVPKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGD 270

Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----G 346
                G L+G+ N     +  M         I  +S    +  +A+ YAR R  S    G
Sbjct: 271 HGGAIGTLVGEENRGLEYMFIMMNAARFAVGIQGLSVSERAYQKAVAYARDRIQSRDLAG 330

Query: 347 GI----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIM 396
                 +I QP ++R +  +   I AA ALS+  A + D A    +EA      A+   +
Sbjct: 331 SPGPVAIIHQPDVRRMLMSMRAQIEAARALSYVAAATSDAAHFSDDEATRKSNQAFYEYL 390

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +M+  V +  ++  GG G+IEE   A++YR++    I  G+      D++ 
Sbjct: 391 VPIVKGWITEMSIDVTSTGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVG 450

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
                            +D G+  K ++  +R ++S   E +G A+       L  +A A
Sbjct: 451 -------------RKTARDGGAVAKGILAQVRKTVS---ELQGDAQLQPIAARLGEAADA 494

Query: 517 LYRAGMNDIADV 528
           L +     +A+V
Sbjct: 495 LEQVVDYVVANV 506


>gi|116695137|ref|YP_840713.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529636|emb|CAJ95983.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 377

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 127/380 (33%), Gaps = 39/380 (10%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G   D+V                GL   I    +            A        
Sbjct: 30  QWDRDGRLPDEVV---------AEMGALGLLGMIVPEEWGGTYTDYVAYALAIEEIAAGC 80

Query: 146 LEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                +MS   +      L   T    + +  ++ S E             +     LTE
Sbjct: 81  AACATMMSVHNSVGCGPVLHYGTDAQKERYLARLASGE-------------LIGAFCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            + G++   + ++ +   +G       ++  +   +   ++ A  E   G   +   L  
Sbjct: 128 PQAGSEAHNLRTRARFTDNGWVLNGSKQFVTNGQRAGVAVVFASTEPERGKKGISAFLVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
            +  G      + K+G R++ T  +   +          +   P E ++I +       +
Sbjct: 188 TNTPGFIVHAPEKKLGIRASDTCAITLEDCTVPHDA---LLGEPGEGLRIALSNLEGGRI 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ AA  L  R A 
Sbjct: 245 GIAAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNAARLLVHRAAR 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              E      E       A   K +  ++A  V ++A++  GG GY+E+  + RHYR++ 
Sbjct: 305 MRSEGVPCLSE-------ASQAKLYASELAERVCSKALQIHGGYGYLEDYPVERHYRDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 358 ITQIYEGTSEIQRMLIARSL 377


>gi|194865401|ref|XP_001971411.1| GG14445 [Drosophila erecta]
 gi|190653194|gb|EDV50437.1| GG14445 [Drosophila erecta]
          Length = 419

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 136/406 (33%), Gaps = 43/406 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR        P    Y   G      E+      +++++   GL  +        
Sbjct: 43  QLQELARKFTREEIIPVAAQYDKSG------EYP---WPIIKKAWELGLMNNHIPADIGG 93

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +         +A             +  S    + V L       K +  ++        
Sbjct: 94  LDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLL------- 146

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +    G+TE   G+D++ I ++ +K  D         W  +  +++ + +L
Sbjct: 147 ------EEPLVAAYGVTEPGAGSDVSGIKTRAEKKGDEYIINGQKMWITNGGVANWYFVL 200

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    GL   R +  +G R++ T  + F +         N
Sbjct: 201 ARTNPDPKCPPSKAFTGFIVERDTPGLTPGRKELNMGQRASDTRGITFEDVRVP---KEN 257

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   +  L EA+ YA  R   G  +     ++ 
Sbjct: 258 VLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQF 317

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +       A   D+ +  S         A I K     MA  + ++A++
Sbjct: 318 MLADMAIGVETSRLAWRLSAWEIDQGRRNS-------YYASIAKCHAADMANKIASDAVQ 370

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+G+  E  + +  R++    I  G+     L +   + +   
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416


>gi|313159324|gb|EFR58688.1| acyl-CoA dehydrogenase, C-terminal domain protein [Alistipes sp.
           HGB5]
          Length = 575

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 89/484 (18%), Positives = 171/484 (35%), Gaps = 60/484 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE          A   ++  P++          D VE+       ++  +  GL  
Sbjct: 55  LEIAGEICG-EVIAPNAEGVDHEGPRVVN--------DHVEYASGTVRNMKAIVDAGLSG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R ++ +       + A  +   A     ++       A  +    +  +   + P 
Sbjct: 106 MTLPRKYDGLNFPLVCFVMANEMVSRADAGFENIW-GLQDCAETLNEFASEEIKAKFLP- 163

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236
                                 + LTE   G+D+ A+  +     +   + L+G K F++
Sbjct: 164 -------------WVSAGATCAMDLTEPDAGSDLGAVMLKATWSEEKQTWLLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   D  ++LA+ E G      +  L+ D    G+  +R++NK+G + + T EL F+N  
Sbjct: 211 NGDGDVSLVLARTEEGTTDARGLSMLVYDKRDGGVKVRRIENKMGIKGSPTCELVFTNAP 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L+GD  +     V  +     L     SV     +  EA+ YA  R   G  +I    
Sbjct: 271 AQLVGDRKMGLIKYVMSLMNAARLGIGAQSVGLCEAAYREALKYAHEREQFGKPIIRFAA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----------------YARIMA 397
           +   ++++   +    AL +      +  K     A                   A    
Sbjct: 331 VSEMLSNMKAKLQGVRALLYETTRFVEVYKQYGHIAHERSLEGEERQEMKFYNRLADGFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K +  + A     +A++  GGSG++++    R YR++   +I  G+    V+  +N 
Sbjct: 391 PLVKLFSSEYANQQAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINS 450

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---------------AR 502
           + KGT   EQ+      +     + V+  L++  +   E                   AR
Sbjct: 451 VTKGT-FMEQIERYAAAEYSQPMQPVVAKLKELTAKFAEMIARVEAGDKELCGFKDFHAR 509

Query: 503 FLTE 506
            L E
Sbjct: 510 RLVE 513


>gi|262371685|ref|ZP_06064964.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311710|gb|EEY92795.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 600

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 85/520 (16%), Positives = 177/520 (34%), Gaps = 62/520 (11%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A    N  +P   +    G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPINQSGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +     + +   A    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPVSLGNVISEMVGTANWSWGMYPGLSHGAVRTLEHHGSDEQKATYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  +DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPQADGSYAISGEKIFISAGE 203

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIVHIVLARLPGAPKGTKGISLFIVPKFHVNADGSVGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDKAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++  +           AL + L+   D  +  + E  
Sbjct: 324 AMRALSGPKALEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLSLHADIVEQGATEED 383

Query: 392 Y------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    ++ PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFSDNILSLLTPIAKAFLTETGYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           +     LD+L   +L+    + +     + + +     K    +++ ++           
Sbjct: 444 TTEIQALDLLGRKVLQTQGAMLKDFTKIIHKFV--EANKDNAAMQEFVAPLAAANKEWGD 501

Query: 504 LTEKIAL--------ASSAAALYRAGMNDIADVFLENRFL 535
           +T +I +          +AA  Y      +   +L  R  
Sbjct: 502 ITMQIGMRAMQNPDEVGAAAVDYMYFSGYVTLAYLWARMA 541


>gi|83311733|ref|YP_421997.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946574|dbj|BAE51438.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 592

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/530 (17%), Positives = 184/530 (34%), Gaps = 63/530 (11%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P    +        +  ++           E            E   +A      L+   
Sbjct: 6   PPLRDIRF-----TMEEVVGLDAITALPGFEDATSETADSILTEAGHIAEGVLSPLNRAG 60

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +   V   P W       +  G +   +   F  +            ++  A 
Sbjct: 61  DEDGARQENGVVRTTPGWKDAWATIVEGGWNGLPFSPDFGGMGLPNLFNHAVHEMWQAAN 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +        +  + + ++L  +      + PK+ + E+  T             + LTE 
Sbjct: 121 MAFTLNPMLTQGAVNALSLYGSEEQKAYYLPKMVTGEWTGT-------------MNLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
           + G+D+AAI ++     D  + LSG K F++    D       ++LA++         + 
Sbjct: 168 QAGSDLAAIRTKAAPEGD-KFRLSGQKIFITYGDHDLADNIIHLVLARLPDAPAGVKGIS 226

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311
            F+VP++L DGS N +    L++K+G   + T  + F +     G L+G  +     +  
Sbjct: 227 LFVVPKMLPDGSRNDVKCVSLEHKLGIHGSPTAVMSFGDHEGALGELVGQPHRGLEYMFV 286

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVMKRAIAD 361
           M     L   +  ++    +  +A +YAR R   G            ++  P ++R +  
Sbjct: 287 MMNHARLAVGLQGLAIAERAYQQARNYARDRVQ-GKPVGWTGSGPASIVHHPDVRRLLMT 345

Query: 362 IALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +   I A   + +       +A+   E  +R E +     + PI K WC ++   + +  
Sbjct: 346 MKSGIEAMRGIHYTAAAFSDIAHHHPEPNARYEASQRLEFLTPIAKGWCTELGQHIASLG 405

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE 473
           ++  GG GYIEE   A+H R++   +I  G+       L    +L         L + + 
Sbjct: 406 VQVHGGMGYIEETGAAQHLRDARITTIYEGTTAIQANDLVYRKILRDKGAFAHTLLAEIA 465

Query: 474 QDLGSSGKKVITILRDSISLCKEDK--------GLARFLTEKIALASSAA 515
                     +  L+   +   E           L     E   LA++AA
Sbjct: 466 ALAAELSADGLASLQAVGTRLSEAAAAAARAVNWLVGQTGEDPRLAAAAA 515


>gi|254460812|ref|ZP_05074228.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677401|gb|EDZ41888.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 573

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 88/440 (20%), Positives = 162/440 (36%), Gaps = 39/440 (8%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    +     G         F  +            +   A L        S 
Sbjct: 71  VRTSPGFAEGFKAIAEGGWIGMSAQPEFGGMGLPMTVTTAVNEMMAGACLSLQLAPLMSQ 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +  +   + PK+ S E+  T             + LTE + G+D+ A++S
Sbjct: 131 GQIEALEHHASDELKALYLPKLISGEWTGT-------------MNLTEPQAGSDVGALSS 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED- 264
           + +   DG + ++G K ++S    D       ++LA++         +  FLVP+ L D 
Sbjct: 178 KAEPNGDGSFSVTGQKIYISWGDHDVAENVCHLVLARLPDGVAGTKGISLFLVPKYLPDD 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L++K+G   + T  ++F    G+L+G        +  M     L  
Sbjct: 238 AGNPGVANTLKVVSLEHKMGLHGSPTAVMQFDGAKGWLVGPEAGGMRAMFTMMNNARLGV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALS 373
               +     +L +A+ YA  R             ++D   ++R +A +  D+ AA A++
Sbjct: 298 GGQGIGAAEGALQKAMIYACERKQGRSPIENGTGTIMDHADVRRMLAVMKADVFAARAIA 357

Query: 374 FRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              A + D   A   S   A A  + PI K +  +    V    ++  GG G+IEE   A
Sbjct: 358 LMCAAAIDMQSATGSSGWGAKAAFLTPIAKAFGTETGMRVSEMGVQVHGGMGFIEETGAA 417

Query: 432 RHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           + YR+    +I  G+     +D V   L  G +    L   +EQ   ++ +    +    
Sbjct: 418 QFYRDVRVTAIYEGTNGIQAMDLVARKLMDGGDAAFALLDEVEQFTEAAREACPALAEPL 477

Query: 491 ISLCKEDKGLARFLTEKIAL 510
               +  +    ++  + AL
Sbjct: 478 WEATESLRETTEWMLAQDAL 497


>gi|294677101|ref|YP_003577716.1| isobutyryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294475921|gb|ADE85309.1| isobutyryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 382

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 134/379 (35%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+     P    L  +    GL        +      +           MA    
Sbjct: 26  PHARDWEAAGTIP--RDLWPKVAALGLGGIYVSEDYGGSGLSRLDATLVFEALAMACPAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S       M+    +P     + PK+ + E                   LTE   G
Sbjct: 84  GSFLSIHNMCGGMIDKFGSPETKARFLPKLCTME-------------TIFSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ + +  G Y L+G K F+S    SDA++ + +  G  G   +  L+ +   
Sbjct: 131 SDAAALRTRAEAVPGG-YKLNGTKAFISGGGYSDAYVTMVRTGGE-GPKGISTLVVEAGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G R+  T ++ F +       L+G                 L+ A  +
Sbjct: 189 KGLSFGGLEDKMGWRAQPTAQVNFDDCMVAAENLVGVAGKGFAYAMAGLDGGRLNIAASA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +    + Y   R   G  L     ++  +A+  + + +A     + A   D A 
Sbjct: 249 LGGAQAAFDATLRYMGERKAFGQSLDQFQALQFRLAEQEVKLQSARIFLRQAAWKLDHAA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +    A  V  + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKLYVTDAAFDVANQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M L +   L    +
Sbjct: 363 GTNEIMRLIITRNLMAERD 381


>gi|84515561|ref|ZP_01002923.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84510844|gb|EAQ07299.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 378

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 134/380 (35%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD     P   AL  +    G                +            +
Sbjct: 22  EHIAPFARDWDSDGTIP--KALWPKLAELGFGGLYVSEDSGGAGLSRLDATLVFEALSYS 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P+  S               + +   LTE
Sbjct: 80  CASVAAFLSIHNMCARMIDSYGSDDLKARILPRALSM-------------DLILSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++    ++  Y L+G K F+S    SDA+I++A+  G  G   +  +L 
Sbjct: 127 PGSGSDAAALKTRAT-CNNETYLLTGTKAFISGGGYSDAYIVMART-GDAGPKGISAILI 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           +G   GL +  L++K+G RS  T +++  +     G LLG                 L+ 
Sbjct: 185 EGDAPGLSFGGLEDKMGWRSQPTRQVQLDDCATPLGNLLGVEGQGFSYAMAGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L + + Y + R   G  L     ++  +AD  + + +A     + A   
Sbjct: 245 AACSIGAAQCALDQTLAYMKDRKAFGQSLDQFQGLQFRLADAEIALQSARTFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K  C +    V  + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DTGAPD------ATKFCAMAKKLCTETGSMVADQCLQLHGGYGYLADYGIEKIVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M L     + +
Sbjct: 359 QILEGTNEIMRLITARQMIR 378


>gi|296156721|ref|ZP_06839559.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295893320|gb|EFG73100.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 377

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 141/394 (35%), Gaps = 35/394 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +        P   +WD+    PA   ++ +    G    I    +      
Sbjct: 9   QRMIRDAARDFAT-ERLAPYAGQWDRDAQLPA--EVVTQMGELGFLGMIVPAEWGGSYTD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 A             LMS   +     +    +      +   + +         
Sbjct: 66  YVAYALALEEIAAGCASCATLMSVHNSVGCGPILNFGSDAQKDRYLHDLATG-------- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                       LTE + G++   + ++   + DG + L+G K F+++   ++  I+ A 
Sbjct: 118 -----RSIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILNGSKQFVTNGARANVAIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +      G    + ++K+G R++ T  +   +       + N+   P
Sbjct: 172 TDPDRGKRGLSAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCAVP---EANLLGEP 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADI 362
            E ++I L  L+   + ++   + +A A       YA  R   G  L +   +   +AD+
Sbjct: 229 GEGLRIALSNLEGGRIGIAAQALGIARAAFDAARLYANERIQFGKALKEHQTIANMLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L    A    E K    E       A   K +  ++A  + + A++  GG 
Sbjct: 289 ATRLNAARLLVHHAARLRTEGKPCLSE-------ASQAKLFASELAEEICSNAIQIHGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 342 GYLEDYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|295696335|ref|YP_003589573.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411937|gb|ADG06429.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 381

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 146/367 (39%), Gaps = 28/367 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLE 147
           P  E W++    P    + RR+   G     +  ++       A  I    +    +   
Sbjct: 27  PRVEEWEREGRVP--REMYRRAGELGYLGLKFPEAYGGSDDLLADAIFVEEIARCGSGGA 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L + +   A+ +         + +               P  +      LG+TE   
Sbjct: 85  AAALTATTGIGATPIWRFGNEEQKRRYL-------------VPAIRGEKIAALGVTEPDA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A++ +  ++  D  Y L+G K F++   S  ++ + A+ +   G   V   + +  
Sbjct: 132 GSDVASMRTVARREGDH-YVLTGSKMFITGGASADYVCVAAKTDPSAGHRGVSMFIVEAG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   K+G R++ T EL           L+G+ N     +        +  A+ 
Sbjct: 191 MPGFSVGRTLRKLGWRASDTAELILDGVQVPAENLVGEENQGFRYIMINFQWERIMLALS 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV+    +L +A+ Y+R R   G  +     ++  + D+A+DI  A +L++R    +   
Sbjct: 251 SVAAAEKALEDALRYSRERTQFGRPIGTFQALRHKMVDMAVDIEKARSLTYRALYLYARG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  A+ A       K +  +M   V   A++  GG+GY+ E  + R++R++   SI 
Sbjct: 311 EDVTVAASMA-------KAYAGEMVNRVTDAALQIHGGNGYMMEYPVQRYWRDARIMSIG 363

Query: 444 LGSGNAM 450
            G+   M
Sbjct: 364 GGTTQIM 370


>gi|222546881|gb|ACM66946.1| FadST1 [Streptomyces toxytricini]
          Length = 386

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 144/379 (37%), Gaps = 38/379 (10%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +++ EF    + ++R     GL    +   +  +     A  I    L  +    A 
Sbjct: 31  GDFYERHEFP---YEIVREMGRMGLFGLPFPEEYGGMGGDYLALGIALEELARVDSSVAI 87

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  + L  +    + W PK+ S E             V    GLTE   G+
Sbjct: 88  TLEAGVSLGAMPLYLFGSEEQKRQWLPKLCSGE-------------VLGAFGLTEPGAGS 134

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDG 265
           D     +   K   G + ++G K F+++  +D    + +  V GR   G   +  ++   
Sbjct: 135 DAGGTRTTAVKDG-GEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPEISSIIVPS 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMS 324
              G       +K+G  ++ T EL F      L   +     G  + ++I   LD   ++
Sbjct: 194 GTPGFTVAAPYSKVGWNASDTRELSFDGVRVPLENLVGEEGRGYAQFLRI---LDEGRIA 250

Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +S +   LA     E++ YA+ R   G  + D   ++  +AD+ +    A       A+ 
Sbjct: 251 ISALATGLAQGCVDESVKYAKERQAFGRPIGDNQAIQFKLADMEMRAHMARVGWRDAASR 310

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               +   +EAA       I K +   +A     +A +  GG G++ E  +AR +R+S  
Sbjct: 311 LVNGEPFKKEAA-------IAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDSKI 363

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 364 LEIGEGTSEVQRMLIAREL 382


>gi|196040454|ref|ZP_03107754.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196028586|gb|EDX67193.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 594

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 158/439 (35%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              +  ++G     +   L
Sbjct: 442 MMMMPGEVGDEPLALQKYL 460


>gi|294012375|ref|YP_003545835.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675705|dbj|BAI97223.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 381

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P     D  ++ P    L       GLH    + +   +       + A      A 
Sbjct: 26  RIAPLAAEIDAKDWFP--RDLWPEMGALGLHGVTVEEADGGLGLGYLEHVVAQEEVARAS 83

Query: 146 LEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              G    + S    + +    TP     + PK+ S E+                L ++E
Sbjct: 84  ASIGLSYGAHSNLCVNQIRRWATPEQKARYLPKLISGEH-------------VGSLAMSE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  ++P +D  ++ A+     G   +   L +
Sbjct: 131 AGAGSDVVSMKLRAEKRGDRYILNGTKFWITNAPYADTLVVYAKT--GEGARGITAFLIE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        +    G V  +   +  + A++S
Sbjct: 189 KGFKGFSIGQKIDKVGMRGSPTAELVFDDCEVPEDNVMGPLNGGVGVLMSGLDYERAVLS 248

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  L   + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D
Sbjct: 249 GIQLGIMQACLDVVLPYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+   +AA A ++A        + A  V  EA++ +GG+GY ++  + R+ R++    
Sbjct: 309 RGKTTRFDAAGAILLA-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLD 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 362 IGAGTNEIRRMLIGREL 378


>gi|322784912|gb|EFZ11683.1| hypothetical protein SINV_00192 [Solenopsis invicta]
          Length = 376

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 130/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     DK           R     GL        +         H +    L   +   
Sbjct: 16  PKAAEIDKKNTFSELRTFWRELGKLGLLGPTVKSEYGGTGGTYLDHIVIMEELSRASAAI 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T +    + PK+ S E+                L ++E   
Sbjct: 76  GLSYGAHSNLCVNQIHRNGTEKQKHKYLPKLCSGEH-------------IGALAMSEPGS 122

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG 265
           G+D+ ++  + +K  D         W  + P +D  ++ A+ + +       +   + + 
Sbjct: 123 GSDVVSMKLRAEKKGDHYVLNGNKFWITNGPDADVIVVYARTDPKTDKPQHGITAFIVER 182

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F +    +   LG++N     +     L  L  A 
Sbjct: 183 GTEGFSTAQKLDKLGMRGSNTGELIFEDCKVPVANILGEVNKGIYVLFSGLDLERLVLAG 242

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  ++     A  YA  R   G  L    +++  IAD+   ++++ +  + +A + D 
Sbjct: 243 GPMGILQACCDVAFEYAHTRQQFGQYLAQFQLLQGKIADMYTALSSSRSYLYSVARACDS 302

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++             +C + A    ++A++ +GG+GYI +    R  R++    I
Sbjct: 303 GHLNRKD-------CAAVLLYCAESAMKASSDAIQILGGNGYINDYVTGRLLRDAKLYEI 355

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   +
Sbjct: 356 GAGTNEIRRIVISRAI 371


>gi|197119937|ref|YP_002140364.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197089297|gb|ACH40568.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 380

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 153/402 (38%), Gaps = 38/402 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + + T ++ AR      P        GE   +V         L      GL   ++   
Sbjct: 9   RIATETIRQAAR--ERIAPVAANIDATGEVAPEV---------LSLLWELGLMTLVFPPE 57

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSRE 182
           +    + Q   +  A   +     A  LM       S   L   +P + K   P++    
Sbjct: 58  YGGAEQDQGTLLCLAVEEIAKHCAASALMLIIQAVGSFPLLHGGSPELLKRVLPRMLEN- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD 241
                              ++E   G+D+A+I +   +  D  Y ++G K F  + P++ 
Sbjct: 117 ------------RELAAYLVSEPGAGSDVASIRTTAVREGDE-YVINGTKVFSTNGPVAS 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            + +LA+     G   +   L +    GL   +++ K+G R + T E+   N     G L
Sbjct: 164 VYTVLARTS-ENGRNGLSFFLVERGTAGLSVGKIEKKLGQRGSKTSEMYLDNVRIPAGNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+ N           +        ++   + +  + + ++R R   G  L +  ++++ 
Sbjct: 223 LGEENKGFHLAMKDFDMSRPAIGAQALGIAQGAFDQMVRHSRERKTFGQQLCEHQMIQQI 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD A  I A+  L +R +  +D+ +  ++       +A + K +    A  +  +A++ 
Sbjct: 283 IADSATKIEASRGLIYRASALYDKGQRNTK-------LASMGKLFASDAAMQITTDAIQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY+++  + R +R++    I  G+     L +   + K
Sbjct: 336 FGGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILK 377


>gi|169622111|ref|XP_001804465.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15]
 gi|111057387|gb|EAT78507.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15]
          Length = 436

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 138/381 (36%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P     D+ E   PA   ++ +    GL        +          I A          
Sbjct: 79  PKAREMDEAESMDPA---VVEQLFEQGLMGIEIPEEYGGSGMNFTSAIIAIEELARVDPS 135

Query: 148 AGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              L     T   + +    + ++ K+W PK+               T+      L+E  
Sbjct: 136 VSVLCDVHNTLVNTAILKYGSEKLKKEWLPKL--------------ATNTVGSFCLSEPV 181

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  A+ ++  K  +G        W  +S  ++ FI+ A ++       +   + +  
Sbjct: 182 SGSDAFALATKATKTDNGYKISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKG 241

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G    + + K+G ++++T  + F +     +   N+     E  K  I  L+   + +
Sbjct: 242 TPGFSIAKKEKKLGIKASSTCVINFDDV---EIPKDNLLGKEFEGYKYAIGLLNEGRIGI 298

Query: 326 SGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +     LA              R   G ++ +   M+  +A    +I AA AL +  A  
Sbjct: 299 AAQMTGLALGAWENAAGYVWNDRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAARK 358

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +    +AA A       K +  ++A  V   A+E +GG G++ E    +++R+S  
Sbjct: 359 KEAGEDFVMDAAMA-------KLYSSQVAGRVSGSAVEWMGGMGFVREGLAEKYFRDSKI 411

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            +I  G+ N  +  +   L+K
Sbjct: 412 GAIYEGTSNIQLTTIGKHLQK 432


>gi|299529428|ref|ZP_07042865.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298722291|gb|EFI63211.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 395

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 141/398 (35%), Gaps = 28/398 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    + R+    G+        +   
Sbjct: 14  GEDIDALRDAVREFAQ-SEIAPRAAEIDRSDQFPM--DVWRKFGELGVLGITVPEQYGGA 70

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    +      + PK+ + E+   
Sbjct: 71  DMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGSEAQKAKYLPKLITGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYYLLNGNKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F +         N+  
Sbjct: 178 AKTEPEMGARGVTAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPA---ENILG 234

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+L+  LD     ++G  + + ++     + Y   R   G  + +  +++  +A
Sbjct: 235 GLNMGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A  + ++ +A + D     ++     R        WC + A  +  E ++  G
Sbjct: 295 DMYTVLQAGRSFAYTVAKNLD--LLGTDHVRQVRKDCASVILWCAEKATWMAGEGVQIYG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E  + R +R++    I  G+     + +   L
Sbjct: 353 GNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|163732157|ref|ZP_02139603.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161394455|gb|EDQ18778.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 382

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 142/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+     P   AL  +    GL               +           MA    
Sbjct: 26  PFAQEWETAGTIP--KALWPKVAELGLAGIYVSEEHGGSGLSRLDATLVFEALAMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S       M+    +  +   W PK+ + E                   LTE   G
Sbjct: 84  GSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCAME-------------TVFSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ ++ + G Y L+G K F+S    SDA++ + +  G  G   +  +L +   
Sbjct: 131 SDAAALRTRAERSNAG-YVLNGTKAFISGGGYSDAYLTMVRT-GDAGPKGISAMLIENGR 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L+NK+G R+  T +++F +       L+G+                L+ A  +
Sbjct: 189 AGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGEEGQGFAYAMAGLDGGRLNIAASA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L  A+ Y   R   G  L     ++  +AD+ + +  A     + A+  D   
Sbjct: 249 LGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQTARIFLRQAASKLDNKT 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S       A     + K +   +A  V  +A++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 SD------ATKYCAMAKLYVTDVAFDVANDALQLHGGYGYLADYGIEKIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + +   +
Sbjct: 363 GTNEVMRVIISRQM 376


>gi|301617187|ref|XP_002938027.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 414

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 130/371 (35%), Gaps = 27/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           WD+ E  P     +R++ H G                +              +     MS
Sbjct: 66  WDEKEVFPV--ETMRKAAHLGFGGIYAQTDVGGSGLSRLDTSIIFEALSTGCVSTTAYMS 123

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                  M+           + P + S                     LTE   G+D A+
Sbjct: 124 IHNMCVWMIDTYGNEEQRHQFCPSLCSM-------------DKFASYCLTEPGSGSDAAS 170

Query: 214 ITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +    GL +
Sbjct: 171 LLTSAKRDGD-YYILNGSKAFISGGGDTDVYVVMCRT-GGSGARGISCLVVEKGIPGLSF 228

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIMSVSGMR 329
            + + K+G  S  T  + F +    +   L     G    MK      ++ A  S+    
Sbjct: 229 GKKEKKVGWNSQPTRAVIFEDCVVPVKNRLGKEGQGFSIAMKGLNGGRINIASCSLGAAH 288

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            S+  A  +   R   G  L     ++  +AD+A  +  A  +    A +         +
Sbjct: 289 ASVLLARDHLGVRKQFGEPLSHNQYLQFKLADMATRLVTARLIVRHAAQALQN------D 342

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  +  + K +       +  +A++  GG GY+++ ++ +  R+   + IL G+   
Sbjct: 343 TGDAATLCAMAKLFATDECFKICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEV 402

Query: 450 MVLDVLNLLEK 460
           M + V   + +
Sbjct: 403 MRMIVARSILQ 413


>gi|156548674|ref|XP_001602338.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase [Nasonia
            vitripennis]
          Length = 1439

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 134/390 (34%), Gaps = 33/390 (8%)

Query: 75   RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            R+A+     L       +R D+         LL++    G+        +          
Sbjct: 1076 RLADEEIRPLVRKMESDKRIDQ--------GLLKKLHESGVMGMEIPAEYGGTGANFTST 1127

Query: 135  IRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            + A             L+    T  + +     +    +++ P++               
Sbjct: 1128 MIAVEELAKVDASIAVLVDIQNTLINAIVRNVGSEEQKREYLPRL--------------A 1173

Query: 194  TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
               A    L+E   G+D  A+ S  ++  +         W  +S ++  F++    +   
Sbjct: 1174 GQYAGSFCLSEVVSGSDAFALKSSAKRDGEHYVLNGSKMWISNSDIAGLFVVFVNADPSA 1233

Query: 254  GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
            G   +   L +    GL   R ++K+G  ++ T  +   +       +LG +        
Sbjct: 1234 GYRGITAFLVERDTPGLKIARPESKLGLEASGTCAVHLEDVRVPASAVLGKVGQGYRYAA 1293

Query: 311  DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +     +      +   +  L   + Y   R   G  +     ++  +A +A+++  A 
Sbjct: 1294 SLLNESRIGIGAQQLGIAQGCLDATVPYTLERKQFGQEIFSFQALQHQLAQMAMEVECAR 1353

Query: 371  ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             L +  A   +  +    EAA A       K +  +MA  V ++ ++ +GG G+ ++   
Sbjct: 1354 LLVYNAARKLEHGEDVMREAAMA-------KLYASEMAQRVTSKCIDLMGGVGFTKDYPQ 1406

Query: 431  ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +++R+  A +I  G+ N  +  +   + +
Sbjct: 1407 EKYFRDCKAGTIYEGTSNMQLTTIAKSIRQ 1436


>gi|195325801|ref|XP_002029619.1| GM24997 [Drosophila sechellia]
 gi|194118562|gb|EDW40605.1| GM24997 [Drosophila sechellia]
          Length = 419

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 135/406 (33%), Gaps = 43/406 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR        P    Y   G      E+      +++++   GL  +        
Sbjct: 43  QLQELARKFTREEIIPVAAQYDKSG------EYP---WPIIKKAWELGLMNNHIPADIGG 93

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +         +A             +  S    + V L       K +  ++        
Sbjct: 94  LDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLL------- 146

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D++ I ++ +K  D         W  +  +++ + +L
Sbjct: 147 ------EEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEYVINGQKMWITNGGVANWYFVL 200

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    GL   R +  +G R++ T  + F +         N
Sbjct: 201 ARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVP---KEN 257

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   +  L EA+ YA  R   G  +     ++ 
Sbjct: 258 VLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQF 317

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +       A   D+ +  S         A I K     MA  + ++A++
Sbjct: 318 MLADMAIGVETSRLAWRLSAWEIDQGRRNS-------YYASIAKCHAADMANKIASDAVQ 370

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+G+  E  + +  R++    I  G+     L +   + +   
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416


>gi|294501718|ref|YP_003565418.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294351655|gb|ADE71984.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 594

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 144/403 (35%), Gaps = 46/403 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL  +     +  +   +      A     A   +    +     +  + L
Sbjct: 66  KLLKQAGELGLLGADVPEEYGGLGLDKITSALIAEKMSRAGGFSITHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P +   E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGTEEQKQAYLPALAVGE-------------KIAAYALTEPGSGSDALGARTTARLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+++G          + +    G+     + K+G +
Sbjct: 173 THYVLNGEKQWITNAGFADVFVVYAKIDGDK----FSAFIVERQFPGVSVGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G V    IL        + +V   + +L     Y 
Sbjct: 229 SSSTRTLILEDALVPKENVLGEIGKGHVIAFNILNIGRYKLGVGAVGAGKRALEITSQYV 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + +  +A +A  + A  +  +R    F++             K  +
Sbjct: 289 NQRQQFKTPIAKFSLTQEKLATMASKLYATESSVYRTVGLFEDHMGQLSEEQQKDGKQIA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A   I   + K +  +    ++ E ++  GG G++ E  I R YR+S  N I  G+ 
Sbjct: 349 ASIAEYAIECSLNKVFATESLDYIVDEGVQLHGGYGFMSEYEIERLYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGS 478
               L V            L LL+K   L E+L   + Q++G+
Sbjct: 409 EINRLLVPGTYLRKALKGELPLLQKAQTLQEELMMLMPQEVGN 451


>gi|212690639|ref|ZP_03298767.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855]
 gi|237709681|ref|ZP_04540162.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|237725166|ref|ZP_04555647.1| acyl-CoA dehydrogenase [Bacteroides sp. D4]
 gi|212666739|gb|EEB27311.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855]
 gi|229436432|gb|EEO46509.1| acyl-CoA dehydrogenase [Bacteroides dorei 5_1_36/D4]
 gi|229456317|gb|EEO62038.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA]
          Length = 568

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +     ++  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDGRGLSMFIYDKNEGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +ID P +   ++ +   + A  AL ++ +   D          E
Sbjct: 309 NEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P++K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL-FSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +     +E +  S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATLRNYEAIPCSEEMQPLMDRVKEMANKFDA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE +       +AR L E  A+   +  L +  
Sbjct: 489 CTNAVKEAQNQELLDFVARRLYEMAAVCIMSHLLIQDA 526


>gi|147678769|ref|YP_001212984.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274866|dbj|BAF60615.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 381

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 148/406 (36%), Gaps = 44/406 (10%)

Query: 66  LSCTAQEL-----ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           L+   QEL     A +  +  P    Y   GE        P    +++ +   GL C++ 
Sbjct: 9   LTSEQQELKKKVRAFVEEHVIPVAKYYDETGE-------FPL--PVIKEAAKIGLLCTVV 59

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
            + +  +          +             +  +  S+  V +  +    + W   +  
Sbjct: 60  PKEYGGLGVDALSAAIISEELGRGCAGIATTIGGNSLSSYAVLIGGSSEQKRKWCQYLLD 119

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                LTE   G+D  ++ +      +         +  +   +
Sbjct: 120 G--------------KLASFALTEPGAGSDAGSVQTTAVLDGNEYVINGSKCFITTGGYA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             + ++A  +   G   +   + +    G+   + +NK+G R++ TVEL F N       
Sbjct: 166 SIYTVIASTDTSKGVKGLSAFIVEAEREGIFVGKHENKMGIRASNTVELMFKNVRVP--- 222

Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
             N+     E  K+ +  LDS  ++ + M V L++A     + +   +   G +L     
Sbjct: 223 KENLIGKEGEGFKLAMQTLDSGRINQAAMAVGLSQAALEAVVDFVNGQQRGGKLLAKSQY 282

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+ + +     + +++    D  +  S+EAA       I K +C   A  V +E
Sbjct: 283 IQFKVADMCMAVETCRNMVYKVCYLKDSGQHFSKEAA-------IAKAYCTDTAMWVASE 335

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  G  GY+++  + + YR+     I  G+     + + N + +
Sbjct: 336 AVDIFGIYGYMKDSPVEKLYRDVKVMQIYEGTNQVQRIVIANNVLR 381


>gi|34499271|ref|NP_903486.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105122|gb|AAQ61478.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 593

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 92/475 (19%), Positives = 179/475 (37%), Gaps = 51/475 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWD 121
            +     +E A+ A      ++  G  G +W   +V   P +    ++ +  G       
Sbjct: 35  ELTDAVLEEGAKFAEGVLAPINKQGDQGAKWKDGEVSAAPGFKDAWQQYVESGWVGLRAP 94

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +               ++  + L        ++ +   +    +  +   + P + S 
Sbjct: 95  EEYGGQGMPALVAAAVEEMWCSSNLAFSLAPLLTLGAVEAIHHHASDELKNIYLPMMASG 154

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           ++  T             + LTE + G+D+A + ++    +DG Y +SG K F++    D
Sbjct: 155 QWTGT-------------MNLTEPQAGSDLAQVRTKAAPAADGSYRVSGQKIFITWGEHD 201

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++         +  F+VP+ L +     G+ N +    L++K+G   + 
Sbjct: 202 MAENIVHLVLARLPDAPAGVKGISLFIVPKFLVNADGSLGARNDVRCVSLEHKLGIHGSP 261

Query: 286 TVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F       G+L+G+ N     +  M     L   I  V+    +  +A+ YAR R
Sbjct: 262 TAVMSFGDNDGAVGYLVGEPNKGLNYMFTMMNHARLGVGIEGVAVSERAYQKAVEYARDR 321

Query: 343 HVS---------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--- 390
             S         G  +I  P ++R +  +   I A  AL+F  A + D A      A   
Sbjct: 322 VQSRAIGSPDPAGVAIIRHPDVRRMLMTMRAQIEAQRALTFYAAAALDRAARHPVAAEAA 381

Query: 391 ---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A    + PI K W  + A  + + A++  GG GYIEE  +A++YR++   +I  G+ 
Sbjct: 382 RNQALLNFLIPIVKGWNTEQANEITSLAVQVHGGMGYIEETGVAQYYRDARITAIYEGTT 441

Query: 448 NAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
               LD++          +   L +  +   G         +  ++S    D   
Sbjct: 442 GIQALDLIGRKTAMDHGVVARALLAEAQSTAGKLQAAGFDSIAGNLSSAIADAER 496


>gi|124266491|ref|YP_001020495.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
 gi|124259266|gb|ABM94260.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
          Length = 596

 Score =  262 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 98/560 (17%), Positives = 203/560 (36%), Gaps = 57/560 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEF 99
           +  L A          E  G        +E A+        L+  G   P   +  +V  
Sbjct: 14  MQELAALEEVARLPGFEDAGIDTAQAVLEECAKFNEGVVAPLNWEGDKQPSSWKDGRVTT 73

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R  +  G         F      +   I +A   ++        + P +T  
Sbjct: 74  TPGFKEAFRGFVEGGWQGLQHSVDFGGQGLPK--TIGSACGEMLNSANLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            + AL+T  +    + + PK+ S ++  T             + LTE + G+D+A + ++
Sbjct: 132 CIEALLTAGSEAQQQTYIPKMISGQWTGT-------------MNLTEPQAGSDLALVRTR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG + L G K F++    D       ++LA+V G       +  F+VP+ L    
Sbjct: 179 AEPQPDGSFKLFGTKIFITYGEHDMAENIVHLVLARVSGAPEGVKGISLFIVPKFLVKAD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K+G +++ T  L++ +     G+L+G  N     +  M      
Sbjct: 239 GSLGERNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNAARY 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAA 369
              +  ++    +  +A+ YA+ R  S            +I  P ++R +  +       
Sbjct: 299 AVGVQGIAVAERAYQKAVAYAKDRVQSRPVDGSVRGSAPIIHHPDVRRMLMTMRSHTEGC 358

Query: 370 TALSFRLANS------FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A++   A +        +A+ R++  A+   M P+ K +  +M+  V +  ++  GG G
Sbjct: 359 RAMAIVAAAAYDAAHAHPDAEVRAQNEAFYEFMVPLVKGYSTEMSVEVASLGVQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           YIEE   A++YR++   +I  G+       L        G    + + + + +       
Sbjct: 419 YIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGGTAKAIAAQIARTEAELAA 478

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           +     R  +      +     + + IA  + A+         +  + L    +      
Sbjct: 479 RDSVAARAVLKRLTAARTAFEQVVDFIAGQTKASPNAVFA-GSVPYLLLAGSLMAGWQLA 537

Query: 542 HCMLHGRFNAAHIIDSLYLD 561
             +L     AA   D  +++
Sbjct: 538 RALLVAETRAAAGDDVAFMN 557


>gi|116694650|ref|YP_728861.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113529149|emb|CAJ95496.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 378

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 135/364 (37%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + RR+   GL C+     +       AH+    +    A   +      S   A  + 
Sbjct: 35  REVWRRAGQIGLLCASIPEEYGGGGGTFAHEAVITQEMSRAVCTSLGNNVHSGIVAHYLL 94

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-- 221
              T    K W P++ S E                 + ++E   G+D+ AI ++  +   
Sbjct: 95  NYGTEAQKKKWLPQMASGEM-------------VAAIAMSEPGAGSDLKAIRTRAVREQT 141

Query: 222 -SDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNK 278
            +   Y ++G K F+++      + ++A+ +   G   V  ++ +     G    R+  K
Sbjct: 142 ENGDCYRINGAKTFITNGYHADLVCVVAKTDPEAGSRGVSLVMVETRDLPGFRRGRILEK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
           IG +   T EL F +        L      G  + M+ L    +  A+ +V+ M+ ++  
Sbjct: 202 IGQKGQDTAELFFDDVLVPCDNLLGTQEGQGFYQLMQQLPQERMIIALGAVATMQRAIEL 261

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              Y R R V G  L D    +  +A+       A       A   D+   R  +     
Sbjct: 262 TTEYVRERKVFGQPLADLQNTRFKLAECKTVATIA-------ATFVDDCMLRLMDGKLDA 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K+WC +    VI E ++  GG GY+ E  IAR Y  +  + I  GS   M   V
Sbjct: 315 ATAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEIMKELV 374

Query: 455 LNLL 458
              L
Sbjct: 375 ARTL 378


>gi|307294247|ref|ZP_07574091.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880398|gb|EFN11615.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 388

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 143/403 (35%), Gaps = 36/403 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E V       L  +  +  P+        ++ D+      W      +   GL       
Sbjct: 15  EEVAMFEHSVLGFIDRFAKPEDAERWRKNKQVDR----SVWVE----AAKAGLLGVSVPP 66

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +        H+I   +    A  +A  +   +           T    + W P + + E
Sbjct: 67  EYGGAGGDLRHEIVITKELGHACADALTISLHNAVIIPYFVSFGTEEQKQRWLPPMCTGE 126

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
           Y              + + +TE   G+D+  +    +K   G Y L+G K F+S+  +++
Sbjct: 127 Y-------------ILAIAMTEPGAGSDLQGMKMSARKTEGG-YLLNGQKTFISNGQIAN 172

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNG--LCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
             ++ A+ + + G   +   + D    G      R   K+G     T EL F + F    
Sbjct: 173 LILVAAKTDTQAGSKGISLFIVDTEQAGDSFRRGRNLEKVGQEGQDTSELYFDDVFVPDD 232

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L G   +  G +        L  A  +++ +  ++AE I Y R R + G  LID    
Sbjct: 233 CVLGGAPGLGMGQLMAKLPQERLVIAWQAMAMIERAVAETIAYVRDRKMFGQALIDFQNT 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+I      A            + K            A + KYW    A  +I E 
Sbjct: 293 QFKLAEIKTTATIARVFLDHCTRLQLDGK-------LDASTASMAKYWISDRASEIIDEC 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY+ E  IAR YR+S  + I  G+   M L +   L
Sbjct: 346 LQFFGGYGYMLEYPIARLYRDSRIHRIYGGANEVMKLLIARSL 388


>gi|119503431|ref|ZP_01625514.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460493|gb|EAW41585.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 386

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 74/405 (18%), Positives = 140/405 (34%), Gaps = 36/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            Y  S     L  +A           P    WD     P     L+ +   G        
Sbjct: 11  AYAASAREFALGELA-----------PHAAAWDAEAIFP--KGALKAAGDMGFMGMYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +                    ++    + +M+       V   W PK+ + E
Sbjct: 58  NAGGLGMSRLDASLIVEELSRGCTTTAAFLTIHNMATNMIGKYCQQAVIDTWCPKLVAGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A++ ++ ++  D +Y ++G K F+S      
Sbjct: 118 -------------TLASYCLTEPGAGSDAASLRTRAERDGD-VYRVNGSKVFISGAGDTD 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
            +++    G  G   +  LL      G+ Y + ++K+G  +  T  + F +    +   L
Sbjct: 164 VLVVMTRTGDAGSKGITALLIPADAAGVNYGKKEHKMGWNAQPTRMITFDDVEVPISHRL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+         +      ++ A  SV   + +L +A  Y   R   G  + D    +  +
Sbjct: 224 GEEGQGFAIAMEGLDGGRINIATCSVGTAQQALEDAQAYVSDRKQFGQAIADFQNTQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ AA  +    A+  D         + A     + K +   +   V  +A++  
Sbjct: 284 ADMVTELVAARQMIRLAASKLDAGD------SQASTYCAMAKRFATDVGFKVCNDALQLF 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           GG GYI E  + R+ R++  + IL G+   M + V   L     L
Sbjct: 338 GGYGYIREYPVERYVRDTRVHQILEGTNEVMRVIVGRKLMMDGAL 382


>gi|114566040|ref|YP_753194.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336975|gb|ABI67823.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 379

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 150/405 (37%), Gaps = 36/405 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           ++LS   QEL R        L    P   + D+   HP    +  +     +    +   
Sbjct: 3   FMLSEE-QELIRSNAREFA-LKYIEPVATKIDQESRHPV--EVFDKLAELDMMGISYPSE 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSRE 182
           +     +    +        +    G L   S       +         + W P +    
Sbjct: 59  YGGGGAEFLTTMIVTEELARSCATTGFLHGYSYGLIGHPILTFGNEEQKQKWMPGL---- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                        +     LTE   GTD+++ T+   K  D  Y L+G K F+++ + +D
Sbjct: 115 ---------AAGKLVGSFALTEPGAGTDVSSATTTAVKKGD-KYILNGTKTFITNAILAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A  +   G   +   L     +GL   +  +K+G R + T E+ F +        
Sbjct: 165 VFVVFAYTDRSAGAKGMSCFLVPQGSSGLNVGQHFDKMGVRGSQTSEVVFKDCVVAADCM 224

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVM 355
           L       +  KI +  LD   + ++ M     +  L E+I Y++ R      +  Q  +
Sbjct: 225 LGKEG---DGFKIAMSALDVGRIGIAAMSTGITQGCLDESIKYSKERVQFKKPIASQQAI 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA++A DI AA  L    A   D+ K  S  A+ A       K +C + A     +A
Sbjct: 282 QWFIANMATDIDAARFLYMNAAFIKDQGKPFSVAASKA-------KLFCSECAARHTTKA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG G+++   + R YR+     I  G+  A  + +   + +
Sbjct: 335 VQIQGGYGFMKGAKVERFYRDVKLTEIGEGTSEAQRMIIAGSVLR 379


>gi|301763004|ref|XP_002916928.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 415

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DAMRKAAQLGFGGVYIRTDVGGSGLSRLDTSVIFEALSTGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       ++           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCVWIIDTFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKRQGDH-YILNGSKAFVSGGGESDIYVVMCRT-GEPGPKGISCIIVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   + N   G +  MK      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAMIFEDCTVPVANRIGNEGQGFIIAMKGLNGGRINVASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     Y   R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 285 LGAAHASVVLTRDYLSVRKQFGESLASNQYLQFKLADMATRLVASRLMIRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A ++  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEEREDAVVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLL 458
           GS   M + +   L
Sbjct: 399 GSNEVMRMLISRSL 412


>gi|312114047|ref|YP_004011643.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219176|gb|ADP70544.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 597

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 87/520 (16%), Positives = 179/520 (34%), Gaps = 68/520 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            V++    E A+        L+      G  ++   V     +     + +  G      
Sbjct: 36  DVIASVLDEAAKFCEEILHPLNQSGDAEGCVFENGTVRTPKGFKQAYDKYVEGGWPSMNA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                                  A L  G     +  + S +A   +  +   + PK+ S
Sbjct: 96  SPEHGGQGLPHTVGFAIEEFICSANLAFGPYPGLTAGAYSAIASHASDELKALYLPKMVS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++     DG Y ++G K F++S   
Sbjct: 156 GEWSGT-------------MCLTEPHCGTDLGLMKTRAVPAEDGSYTITGTKIFITSGEH 202

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         V  F+VP+ L D     G+ N +    +++K+G +++
Sbjct: 203 DLTNNIIHLVLAKLPDAPAGSKGVSLFVVPKFLPDDDGEPGARNAVSCGSVEHKMGIKAS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+   N     +  M     L   I  +    ++   A+ Y + R  
Sbjct: 263 ATCVMNFDGAVGWLVAQPNQGMRAMFTMMNAARLGVGIQGLGIAEIARQNAVIYTKERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
                           LI  P +++ + +       A AL+  +    D A    + A  
Sbjct: 323 GRSLTGVKAPEKPADPLIVHPDVRKNLLEAKAFTEGARALAVMIGLGIDRAAHHPDAAVR 382

Query: 391 ----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K +   M      +  +  GG GYI E  + +  R++  + +  G+
Sbjct: 383 QQSNDLVALLTPVIKAYYTDMGVETAIKMQQMFGGHGYIREHGMEQFVRDARISMLYEGA 442

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLE------------QDLGSSGKKVITILRDSIS 492
                LD++   L + G       F+T++             D+ ++ ++    L  + +
Sbjct: 443 NAIQALDLVGRKLPQNGGAAVRAFFATIQTEIEDTLTDHDIADISAALEEAFAKLHQATA 502

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
              +      F     A  ++   L    +  +  ++L+ 
Sbjct: 503 WLAQHA----FANPDEAGGAATDYLRIFALVTVGWIWLKT 538


>gi|227820315|ref|YP_002824286.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227339314|gb|ACP23533.1| probable acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 382

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 136/378 (35%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P     LR +   G+               +                 
Sbjct: 28  PHAIDWDQQKHFPV--ETLRAAAALGMAGIYVRDDVGGTGLTRLDAAMIIEALATGCPAI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T    +   P + + E             +     LTE   G
Sbjct: 86  ASFVSIHNMCAGMIDRYGTEEQRQRLLPSLLTME-------------ILASYCLTEPGSG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L+G K F+S    S  +I++A+  G  G   +   + D   
Sbjct: 133 SDAAALKTKAVRDGDA-YLLTGQKQFISGAGESGLYIVMART-GEEGPKGISAFVVDKDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G  +  T  +   N         N      E  +I +       L+ A
Sbjct: 191 PGLTFGANEKKMGWHAQPTRAVMLDNVRVPA---ANRLGAEGEGFRIAMAGLDGGRLNIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A+ Y   R   G  + +   ++  +AD+A D+  A    +R A++ D
Sbjct: 248 AASLGGAQAAFDKALAYVAERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRAASALD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            +         A  +  + K +      AV  +A++  GG GY+ +  + +  R+   + 
Sbjct: 308 ASDPD------ATKLCAMAKRFVTDRCFAVANDALQLHGGYGYLADYGVEKIVRDLRVHQ 361

Query: 442 ILLGSGNAMVLDVLNLLE 459
           IL G+   M L V   + 
Sbjct: 362 ILEGTNEIMRLIVSRAVM 379


>gi|116327188|ref|YP_796908.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116119932|gb|ABJ77975.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 570

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 87/430 (20%), Positives = 171/430 (39%), Gaps = 47/430 (10%)

Query: 74  ARMA-NYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             +A N  +P +      G ++   KVEF P    L+ + I  G+    + R +  +   
Sbjct: 60  GDLAGNILSPHVAKLDREGLKFKEGKVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIP 119

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              K   + ++         +    V  A ++    T  + ++W PK+ + ++       
Sbjct: 120 WTVKSFISEIFYRVDTSL-AIAIGCVNLAEILEHHATREMKEEWIPKLAAGKF------- 171

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIM 245
                    +GLTE   G+D++ + ++  K  +G + L+G K F++            + 
Sbjct: 172 ------VCAMGLTEPDHGSDLSNLRTKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLT 225

Query: 246 LAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           LA+      G   +   L       +    ++ K+G   + T E+ F N+ G L+G+  +
Sbjct: 226 LARSGKIGSGARGLSLFLV--QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGEEGL 283

Query: 305 ST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                   +     +  A  S      +  EA+ Y + R   G  LI+ P +K+ I  I 
Sbjct: 284 GLVKYTMGILNGARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIE 343

Query: 364 LDIAAATALS-----------FRLANSFDEAKSRSEE---------AAYARIMAPITKYW 403
            ++ A   L+           +R      +  +  E             A I+ PI+K++
Sbjct: 344 REMYAMRCLTLEGSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFY 403

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-T 462
           C +    V+++A++  GGSGY E+  I+R YR++   +I  G+    +   +  +  G T
Sbjct: 404 CSETCLKVVSDALQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQINACIGGITSGLT 463

Query: 463 NLFEQLFSTL 472
           + F +  S L
Sbjct: 464 HSFGEYVSEL 473


>gi|108762147|ref|YP_631178.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108466027|gb|ABF91212.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 379

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 80/368 (21%), Positives = 143/368 (38%), Gaps = 28/368 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQ 145
            P G  WD+    P    L R++   G      D  +        +    A      +  
Sbjct: 25  TPHGLEWDRAGIFP--KELFRKAGDLGFLGINHDPKYGGSGLDYWYVTVFAEELSRSLNA 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L+  S  +  ++  + T    +++               P  K      LG++E 
Sbjct: 83  GVNMALLVQSQMATPIINEIGTDEQKREFLE-------------PALKGEKIAALGVSEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A+I +  ++  D  Y ++G K ++++     FI LA   G  G   +  +    
Sbjct: 130 GCGSDVASIKTTARRDGDD-YVINGSKMWITNGTRADFITLAVRTGEAGYGGISLVTFPT 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+GN S+ T  L F +      ++LG+ N     +        L  AI
Sbjct: 189 DVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQGERLVGAI 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+GM   + ++I Y   R   G  L+   V +    +    I AA  L++   + FD 
Sbjct: 249 TTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDR 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +E + A       K +   +A  V  +  +  GG GY+EE SIAR +R+    +I
Sbjct: 309 KENPVKEVSMA-------KLFAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLITI 361

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 362 GGGTSEVM 369


>gi|138894126|ref|YP_001124579.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134265639|gb|ABO65834.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 398

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 133/381 (34%), Gaps = 43/381 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   GE +D+  F        +R     L        +  +     +   A    
Sbjct: 26  PYIKEWDERGE-FDRNIF--------KRLAELNLMGVCIPEQYGGMGMD--YNSLAIVCE 74

Query: 142 LMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  +     
Sbjct: 75  ELERGDTAFRTAVSVHTGLNSLTLLQWGTEEQKQKYLI-------------PQARGEKIG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             GLTE   G+D+A+I +   +  D         W   + ++D F++ A  +       +
Sbjct: 122 AFGLTEPNAGSDVASIQTTAVRDGDDYILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + + +  G   + +K K+G RS  T EL F N         N+     E  KI +  
Sbjct: 182 SAFIVERTMPGFSSRPIKGKLGIRSGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSA 238

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+   +V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L
Sbjct: 239 LDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQISRLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E  + R
Sbjct: 299 VYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNEYPVER 351

Query: 433 HYRESPANSILLGSGNAMVLD 453
           + R S A  I  G+     + 
Sbjct: 352 YLRNSKAPVIYEGTREIHTIM 372


>gi|144900128|emb|CAM76992.1| acyl-CoA dehydrogenase family protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 586

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 96/531 (18%), Positives = 190/531 (35%), Gaps = 75/531 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A++A      L+      G +    KV   P W       +  G +   +
Sbjct: 35  DLVESILEEAAKIAADTLAPLNRIGDTDGAKLVDGKVRVSPGWQEAWNVLVDGGWNGLPF 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +            ++  A +        +  + + V    T      + PK+ +
Sbjct: 95  SPEHGGMGLPNVLNTAVHEMWQAANMAFTLCPMLTQGAVNAVESYGTAEQKALYLPKMVT 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+AAI ++     D  Y +SG K F++    
Sbjct: 155 GEWTGT-------------MNLTEPGAGSDLAAIRTKAVPEGDH-YRISGSKIFITYGDH 200

Query: 241 DA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           +       ++LA++         +  F+VP+ L +     G+ N      L++K+G   +
Sbjct: 201 EMVENIIHLVLARLPDAPAGVKGISLFIVPKFLVNADGSLGARNDAVCASLEHKLGIHGS 260

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F       G L+G+ N     +  M         +  ++    +  +A++YAR 
Sbjct: 261 PTAVMAFGEKDGAIGTLVGEANRGLEYMFTMMNHARQAVGLQGLAIAERAYQQALYYARE 320

Query: 342 RHVSGGI----------LIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKS 385
           R   G            +++ P ++R +  +   I A   L +       +A++ D+A  
Sbjct: 321 RVQ-GKPTGWTGSGPTGIVNHPDVRRMLMTMKCQIEAMRGLIYSAAAYVDIAHNHDDAAE 379

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R+     A +  P+ K W  ++   + +  ++  GG GY+EE   A+H+R++   +I  G
Sbjct: 380 RARAQLLADLYTPLVKGWSTELGNVIASLGVQVHGGMGYVEETGAAQHFRDARITTIYEG 439

Query: 446 SGNAMV--LDVLNLLEKGTNLFEQLFSTLEQD--------------LGSSGKKVITILRD 489
           +       L +   L  G      L + +                 L ++    I     
Sbjct: 440 TTAIQANDLVLRKTLRDGGQGIRVLLADVAATADAAAAAGLAIGAKLKAAINTAIACTDW 499

Query: 490 SISLCKED----KGLARFLTEKIALASSAAALYRAGMND--IADVFLENRF 534
            +   KED     G A    E + +   A  + +A +      D FL  + 
Sbjct: 500 LVGAAKEDPRLPAGAAVPFLELMGIVVGAQMMAKAAVVAQGATDGFLAAKL 550


>gi|319763616|ref|YP_004127553.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118177|gb|ADV00666.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 383

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 127/355 (35%), Gaps = 26/355 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        F  +      ++ A      A      L+  +V   S  +    TP  
Sbjct: 46  AMGLFGLTIPEKFGGLELTMEEEVLAVFELCRASPVFRSLLGTTVGIGSQGILFDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E                   LTE   G+D A++ +   +  D       
Sbjct: 106 QARYLPKLATGEMM-------------ASFALTEPEAGSDAASLRTTAIRDGDFYVVNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+      G   V   + +    G+ + +   K+G +   T ++
Sbjct: 153 KRFITNAPQAGMFTLMARTNPANKGAGGVSAFIVEAGTPGISFGKRDKKMGQKGAHTCDV 212

Query: 290 EFSNTFGFLLG--DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N          L    G    MK+L    +  A ++V+     L  A+ YA  R   
Sbjct: 213 IFENVRVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVAVAVAERMLDMALRYAAERRQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD   +I AA  +    A   D+    S E       A   K +  
Sbjct: 273 GQPIGNFQLVQAMLADSKAEIYAARCMVLDAARRRDDKLPNSTE-------ASCAKMFAT 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +M   V   A++  GG+GY+ E +I R YR+     I  G+       +   + +
Sbjct: 326 EMCGRVADRAVQIFGGAGYMSEYAIERFYRDVRLFRIYEGTTQIQQTVIAKNMLR 380


>gi|170062288|ref|XP_001866603.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880245|gb|EDS43628.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 629

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 165/429 (38%), Gaps = 62/429 (14%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            + +        + L  T    + + P++                 V     LTE   G+
Sbjct: 152 CIGAHQSIGFKGILLYGTKAQKEKYLPQV-------------STGRVYAAFALTEPSSGS 198

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLL 262
           D  +I  +  K +DG  Y L+G K ++S+  ++D F + AQ    + + G     V   +
Sbjct: 199 DAGSIRCRAVKSADGKHYVLNGSKIWISNGGIADIFTVFAQTEVVDAKTGQKRDKVTAFI 258

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            +    G+     +NK+G + + T E+ F +         NV     +  K+ +  L++ 
Sbjct: 259 VERGFGGVSNGPPENKMGIKCSNTAEVYFEDCKIPA---ENVLGQEGDGFKVAMNILNNG 315

Query: 322 IMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              +S      MR  + +A  +A  R   G  L     ++  +A +A+   A  ++++ +
Sbjct: 316 RFGMSATLSGTMRACIQKAAEHATNRVQFGRKLETYGGIQEKLARMAMHHYATQSMAYMI 375

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + + D             + A I+K +  + A  V  EA++ +GG G++++  + R  R+
Sbjct: 376 SGNMDSGSVD------YHLEAAISKVFASESAWYVCDEAIQILGGMGFMKDTGLERVMRD 429

Query: 437 SPANSILLGSGNAMVLDV-----------LNLLEKG--------TNLFEQLFSTLEQDLG 477
                I  G+ + + L V           L  L+K           +F++      +  G
Sbjct: 430 LRIFRIFEGTNDILRLFVALTGIQYAGGHLKELQKAFKNPAANLGLIFKEGSRRAARSFG 489

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFL 535
             G  +   + D +         AR  +E I L   A  + L + G   + + ++ NR  
Sbjct: 490 MGGTDLTPFVADQLKDA------ARQCSESIDLFGQAVESLLIKHGKGIVEEQYMLNRLA 543

Query: 536 DNCHSTHCM 544
           D    T+ M
Sbjct: 544 DAAIDTYAM 552


>gi|156740271|ref|YP_001430400.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231599|gb|ABU56382.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 383

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 131/376 (34%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    PA     R+    GL    +   +            A      A    
Sbjct: 26  PRARHTDETGEFPA--ETFRKMAELGLMGLPFPEEYGGAGADSVSTAIAIEEIARACGST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + S  +      +A+  T    + +               P  +        LTE   
Sbjct: 84  ALIYSAHLGLGCAPIAMFGTEEQKRRFL-------------QPAAEGQHLGAFALTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  +  +          W  S+ ++   I+ A  +       +  ++     
Sbjct: 131 GSDAGATRTTARLENGEWVINGAKMWITSASIAGHLIVTAVTDPGERH-AISAIIVPAGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL + + + K+G R + T  + F N        L      ++    L  LD   + +  
Sbjct: 190 PGLSFGKPEPKMGLRGSITNAVTFENVRVPEANLLGRRGRGLQQF--LAVLDGGRIGIGA 247

Query: 328 MRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M + LA+A       YAR R   G ++     +   IAD+A+ + AA  L ++ A   D+
Sbjct: 248 MAIGLAQAAFEVASAYARERTAFGKLIGAYESVSNMIADMAVGLEAARLLVYQAAWLKDQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S EAA       I K +  ++   +  +A++ +GG GY  E  + R YR+    +I
Sbjct: 308 GRQYSREAA-------IAKLYASEVGEKICRDAIQVLGGYGYSSEYPLERIYRDQRLLTI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   + + +   +
Sbjct: 361 GEGTSEILRVVIGRQI 376


>gi|83592644|ref|YP_426396.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83575558|gb|ABC22109.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 596

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 93/509 (18%), Positives = 172/509 (33%), Gaps = 73/509 (14%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV------EFHPAWHALLRRSIH 112
           E     ++    +E A++       L      G+    V           +    R    
Sbjct: 31  EEFTADLIDPVLEEAAKICE---DVLQPLNRPGDEEGCVLENGVVRTPKGFPEAYRTFRE 87

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D +       Q        +   A L  G     S  +   +    T     
Sbjct: 88  GGWTSITCDPAHGGQGLPQVVNTFIEEMICAANLSFGMYPGLSHGAYVALKQFGTEDQKA 147

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P +    +  T             + LTE + GTD+  + ++     +G Y ++G K
Sbjct: 148 RYLPALVDGTWTGT-------------MCLTEPQCGTDLGLLRTKAVPDGEGGYKITGTK 194

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA++         +  FLVP++L       G  N +    L+
Sbjct: 195 IFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTEEGALGDRNAVTCGALE 254

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G ++++T  L F    G+L+G+ +     +  M     L   +  +     S   A+
Sbjct: 255 HKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGVGVQGLGLAEASYQGAV 314

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YAR R                  LI  P ++R +      +    AL+  +  + D   
Sbjct: 315 AYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEGGRALAAWVGLALDRQH 374

Query: 385 ------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                 +R+E   +  +M P+ K     +        ++  GG GYI E  + ++ R+  
Sbjct: 375 HAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGHGYIREHGMEQYIRDCR 434

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
              I  G+     LD++                L ++ G + ++    + D I    +D 
Sbjct: 435 ITQIYEGTNGIQALDLVG-------------RKLPENAGRNLRRFFHPVADYIEARLDDD 481

Query: 499 GLARF---LTEKIALASSA-AALYRAGMN 523
            LA F   L +       A A + R GM 
Sbjct: 482 TLAEFVGPLAKTFVRLQQATAQVARVGMT 510


>gi|294667775|ref|ZP_06732985.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602401|gb|EFF45842.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 387

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 148/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLLGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    +    + + PK+
Sbjct: 60  VEDAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASHEQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRYVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G V  +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|222111004|ref|YP_002553268.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221730448|gb|ACM33268.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 388

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 146/407 (35%), Gaps = 31/407 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +      WD     P     + R+   G       
Sbjct: 2   DFELSEDQRAFADTARQFAQAELAPH---AAEWDAQGIFP--REAICRAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    T  V  +W   + S 
Sbjct: 57  ESAGGLALPRLDATLVFEELAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEALTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS- 240
                               LTE   G+D A+I ++ + + +  Y ++G K F+S   S 
Sbjct: 117 -------------QKLASYCLTEPGAGSDAASIKTRAELVGNE-YVINGSKAFISGAGST 162

Query: 241 DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           D  +++A+  + + G   +       +  G+ Y + + K+G  S  T ++ F N      
Sbjct: 163 DVLVLMARTGDAQSGAGGISAFAVPANLPGIHYGKKEEKMGWNSQPTRQISFDNVRIPAN 222

Query: 300 GDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L     G    MK L    ++ A  SV   + +L  A  Y + R   G  +     ++
Sbjct: 223 HLLGQEGEGFKIAMKGLDGGRINIATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A ++ AA  +    A+  D        A  A     + K +   +   V+ EA+
Sbjct: 283 FKLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDVGFTVVNEAL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +  GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 337 QLHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIGRRMLDGDA 383


>gi|221103162|ref|XP_002163311.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, short/branched
           chain [Hydra magnipapillata]
          Length = 418

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 132/360 (36%), Gaps = 34/360 (9%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTP 168
              G         +          I               +     ++ +A ++ L  T 
Sbjct: 79  FEQGFMGMEIPEKYGGSGSSFMSMITVIEELARIDPSVSIICDVQNTLVNALLIQL-ATE 137

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K++ PK+               TS+     L+E   G+D  A+ +  +++ D     
Sbjct: 138 DQKKEYLPKL--------------ATSMVGCFNLSEAGSGSDAFAMKATAKQVGDDYIIN 183

Query: 229 SGHKWFLSSPMSDAFIMLAQ-------VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +   W  ++  +  F++ A                 +   L      GL   + ++K+G 
Sbjct: 184 ANKLWISNAEHAGLFLVFANAKPDLLNTNPSKAYKGITCFLVPKDTKGLVVGKKEDKLGI 243

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+++T  +++++       +LG+L +      +   +  +      +   + ++  A+ Y
Sbjct: 244 RASSTCPVDYTDVRVPKSSILGELGLGYKYAIECLNIGRIGIGAQMIGLAQGAMDIAVPY 303

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R      + D   ++  I+D+A  + AA  L +  A   +  K    +AA A     
Sbjct: 304 TKERQQFNKKIFDFQGLQHQISDVATKLEAARLLVYNAARLKEANKDFVMQAAMA----- 358

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+  ++A    ++ +E +GG G+ +E  I + YR+     I  G+ N  +  +  LL
Sbjct: 359 --KYYSSEVATLATSKCIEWMGGVGFSKEYPIEKFYRDCKIGCIYEGTSNIQLNTIAKLL 416


>gi|167841030|ref|ZP_02467714.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 596

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 85/440 (19%), Positives = 171/440 (38%), Gaps = 54/440 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+    G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFAEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ +  +  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLIAGVWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNED 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAA 369
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      A
Sbjct: 299 GVGMQGIGVAECAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGA 358

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS+  A   D A   ++E   A+  A      PI K W  +M   V +  ++  GG G
Sbjct: 359 RALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPIVKGWSTEMVNEVASLGIQVHGGMG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +IEE   A++YR++   +I  G+       L        G  + + +   + Q + + G 
Sbjct: 419 FIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKAIVGEIRQTVEALGA 478

Query: 482 KVITILRDSISLCKEDKGLA 501
                   ++ +  E+   A
Sbjct: 479 HDGPAF-AAMKVQLENGARA 497


>gi|167768666|ref|ZP_02440719.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1]
 gi|317498911|ref|ZP_07957195.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167710190|gb|EDS20769.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1]
 gi|291559747|emb|CBL38547.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2]
 gi|316893836|gb|EFV16034.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 380

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 136/358 (37%), Gaps = 33/358 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPR 169
             GL    + +            + A      + A +  G+ +  S+   S++       
Sbjct: 47  ELGLVGLPYPKEVGGQGADYLSYVLAVEEISKVDASMGIGYSVVTSLYGGSIMNSAAPVE 106

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             +++  ++ S +                  GLTE   G+D     +  +K  D  Y L+
Sbjct: 107 KKREFLEEVLSGKCFG-------------SFGLTEPNAGSDAGGCVTVAEKDGDD-YILN 152

Query: 230 GHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F  + P++D   + A  E       +   +      G    ++++K+G RS    E
Sbjct: 153 GLKCFNTNGPLADYTAVYALTEPEKKAKGLSCFVVKKGTPGFSVGKIEDKMGIRSAQVSE 212

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           +   N         N+     +  K+ +  LD   + V+   + +AE     A  Y + R
Sbjct: 213 MILENVRVP---KENMIVESGQGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L     +   +A++ ++I AA  + ++ A    E +  S  AA A+ +      
Sbjct: 270 EQFGKPLYRNQYLAFKMAELEMEIEAAKLMLYKAATDKQEGRPYSLPAAKAKYL------ 323

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            C + A  V  EA++ +GG+GY++E  + R  R++    I  G+     L V   + +
Sbjct: 324 -CTEAAMHVTTEAVQMLGGNGYMKEYHVERMMRDAKITQIYEGTNEIQKLIVSGAIFR 380


>gi|16265193|ref|NP_437985.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307308820|ref|ZP_07588508.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15141333|emb|CAC49845.1| acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306900625|gb|EFN31237.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 380

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 135/378 (35%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P     LR +   G+               +                 
Sbjct: 26  PHAVDWDQQKHFPV--ETLRAAAALGMAGIYIRDDVGGTGLTRLDAAMIIEALATGCPAI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T    +   P             P+    V     LTE   G
Sbjct: 84  ASFVSIHNMCAGMIDRYGTDEQRRRLLP-------------PLLTMDVLASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L+G K F+S    S  +I++A+  G  G   +   + +   
Sbjct: 131 SDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMART-GEEGPKGISAFVVEKDA 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G  +  T  +   N    +    N      E  +I +       L  A
Sbjct: 189 PGLTFGANEKKMGWHAQPTRAVMLDNVRVSV---ENRLGAEGEGFRIAMAGLDGGRLSIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A+ Y + R   G  + +   ++  +AD+A D+  A    +R A + D
Sbjct: 246 AASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRAACALD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A         A  +  + K +      +V  +A++  GG GY+ +  + +  R+   + 
Sbjct: 306 AADPE------ATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLE 459
           IL G+   M L V   + 
Sbjct: 360 ILEGTNEIMRLIVSRAIM 377


>gi|326508384|dbj|BAJ99459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 84/512 (16%), Positives = 178/512 (34%), Gaps = 77/512 (15%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
            Y+ D     L      +   +L       +     E  R+A   T  L      G+R  
Sbjct: 32  VYNVDKHFATLKETGGLLATPDL-------VESILDETGRLA---TEVLAPLNVVGDRVG 81

Query: 96  KVE-------FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                       P +     + +  G     +   +      ++  I  A +   A    
Sbjct: 82  CTWVDKHTTKTPPGFKEAYDQFVQAGWGAISYPEKYGGQGLPKSLSIVQADMTASACFTW 141

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S  + + + +  +  + + +  K+   E+  T             + LTE + G
Sbjct: 142 TMYPGLSKGAINTLLVHGSEALKEKYLHKMIQGEWTGT-------------MCLTEPQCG 188

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFL 257
           +D+  + ++ +   DG Y +SG K F+S    D        +LA++         +  F 
Sbjct: 189 SDLGQVKTKAEPNGDGTYKISGTKIFISCGDHDMADNILHCVLARLPNAPAGTKGISLFA 248

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           VP+   +     G  N +   R+++K+G   ++T ++ F    G L+G  N     +   
Sbjct: 249 VPKRKVNADGSLGDFNNVGIDRIEDKMGCHGSSTCQINFEEAEGVLIGSENKGLPHMFTF 308

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIA 360
                + +A+  ++   +S  +A+ YA+     R +SG          +I+ P +++ + 
Sbjct: 309 INTSRVGTAVQGMAAAELSYQKALAYAKERFSMRALSGTKNPEKAADFIINHPGVRKLLM 368

Query: 361 DIALDIAAATALSFRLANSFDEA---------KSRSEEAAYARIMAPITKYWCCKMAPAV 411
                     ++ +  A   DE          K  +E       M PI K +  +M    
Sbjct: 369 FQKAIAEGGRSMIYECAFLADEMFEAEVKGDTKKVAEIDDRLGFMTPILKGYLTEMGLEA 428

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL------- 464
               ++  GG GY+++  + +  R+    S+  G+     LD+L        L       
Sbjct: 429 ANAGIQVWGGHGYVKDNGMEQIVRDVRIASVWEGTTQIQGLDLLGRKILLGKLKPINNHC 488

Query: 465 ---FEQLFSTLEQDLGSSGKKVITILRDSISL 493
              + ++   L +  G++  +   ++  +  L
Sbjct: 489 SAMYNKIGKVLSESSGATRSRAWGLMLATAEL 520


>gi|254718242|ref|ZP_05180053.1| isovaleryl-CoA dehydrogenase [Brucella sp. 83/13]
          Length = 382

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 137/402 (34%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L       T       P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFTE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELMFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|148554389|ref|YP_001261971.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499579|gb|ABQ67833.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 571

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 92/492 (18%), Positives = 170/492 (34%), Gaps = 53/492 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
                F +     +  + E V S    E A +A  +      + P G     V     + 
Sbjct: 23  GATDRFAAATPDLVAAVIEGVGSFAEGEWAPLARVSDQVGAKWTPEG-----VVMPEGFA 77

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           A  +  +  G        +        A           A +        SV +   +  
Sbjct: 78  AAYKAYVEAGWGTISAPEAHGGQGLPYALASVVLETLGTANMAFTLCPLLSVGAIEALVH 137

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +      + PK+ S E+  T             + LTE + G+D+ A+ ++     DG
Sbjct: 138 HGSEAQQALYLPKLVSGEWTGT-------------MNLTEPQAGSDVGALRAKATPRGDG 184

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------GSPN 268
            + +SG K F+S    D       ++L +  +G  G   +   L            G+ N
Sbjct: 185 TWSISGTKIFISFGDHDLADNIVHLVLVRTPDGPAGTKGISLFLVPKYRVNPDGSPGAEN 244

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    +++K+G   + T  L F +     G L+G        +  M     L+  +  V
Sbjct: 245 DVRTVSIEHKMGLHGSPTCVLSFGDRGECVGELIGPEFGGMRAMFTMMNNARLNVGLQGV 304

Query: 326 SGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRL 376
                +  +A+ YAR R  S            +I+ P ++R +  +     AA AL +  
Sbjct: 305 QAAEAATQKAVAYARERIQSARAGSGSPAPVAIIEHPDVRRMLLRMKALTQAARALLYYS 364

Query: 377 ANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A   D A    + A A   ++ P+ K +   +   V    ++  GG GYIEE   A+ +R
Sbjct: 365 AGMVDRATLGDKAAQARLELLTPLAKAYGTDLGCEVANLGIQVHGGMGYIEETGAAQFFR 424

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRD 489
           +    +I  G+       L    L  +G     +L + +  +   +G + +      +  
Sbjct: 425 DVRITTIYEGTNGIQAADLVGRKLGLEGGGTLARLIADMRAEAEDAGLRALIDACERVAA 484

Query: 490 SISLCKEDKGLA 501
            ++    D  LA
Sbjct: 485 HLAAADVDDRLA 496


>gi|56418980|ref|YP_146298.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56378822|dbj|BAD74730.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 398

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 135/394 (34%), Gaps = 47/394 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   GE +D+  F        +R     L        +  +     +   A    
Sbjct: 26  PYIKEWDERGE-FDRNIF--------KRLAELNLMGVCIPEEYGGMGMD--YNSLAIVCE 74

Query: 142 LMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  +     
Sbjct: 75  ELERGDTAFRTAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQARGEKIG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             GLTE   G+D+A+I +   +  D         W   + ++D F++ A  +       +
Sbjct: 122 AFGLTEPNAGSDVASIQTTAVRDGDDYILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + + +  G   + +K K+G RS  T EL F N         N+     E  KI +  
Sbjct: 182 SAFIVERTMPGFSSRPIKGKLGIRSGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSA 238

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+   +V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L
Sbjct: 239 LDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQISRLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E  + R
Sbjct: 299 VYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNEYPVER 351

Query: 433 HYRESPANSILLGSGNA----MVLDVLNLLEKGT 462
           + R S A  I  G+           VL   +   
Sbjct: 352 YLRNSKAPVIYEGTREIHTIMQAEYVLGYRQDKP 385


>gi|221215708|ref|ZP_03588669.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221164410|gb|EED96895.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
          Length = 596

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 101/517 (19%), Positives = 193/517 (37%), Gaps = 63/517 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFC---GEVLAPLNVDGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVSATPGFREAFRQFVEGGWQGLQHPTDYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      PI K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  +   L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKE-DKGLARFLTEKIALASS 513
           + GK          +  ++  + L+  +   +A A  
Sbjct: 475 ALGKLDGAAAASMKAQLEQGAQALSSVVDYVLANAKQ 511


>gi|213420188|ref|ZP_03353254.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 285

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 107/285 (37%), Positives = 163/285 (57%), Gaps = 1/285 (0%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+ E+EF +T G+ L
Sbjct: 2   SDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRL 61

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       +  M  +  LD A+ S   MR + + AI++A +R   G  LI+QP+M++ +
Sbjct: 62  GEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTL 121

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           + +AL +   TAL FRLA ++++ +  ++EA +AR+  P  K+  CK     +AEAME +
Sbjct: 122 SRMALCLEGQTALLFRLARAWEQ-RREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVL 180

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY EE  + R YRE P NSI  GSGN M LDVL +L K   +++ L     +  G  
Sbjct: 181 GGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQD 240

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
                 + +    L K D+ + R +T+++ L    A + R     
Sbjct: 241 RHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLRHASPP 285


>gi|114770393|ref|ZP_01447931.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
 gi|114549230|gb|EAU52113.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
          Length = 592

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 108/578 (18%), Positives = 209/578 (36%), Gaps = 78/578 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW---DKV 97
            +   ++     +  E+  +    +     E A+ A      L+      G  W   + V
Sbjct: 12  AIQHALSPEIHKLVSEIHDISNDTVDVVLSEAAKFARDVIAPLNHLGDKQGCTWHADNTV 71

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           +  P +    +     G         F      +      A ++  A +        S  
Sbjct: 72  QTPPGFKEAYKEMSEAGWCSIEGCEEFGGQNLSKMISASTAEMWHSANMSFSLCHLLSQG 131

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +     P+  + + PK+    +  T             + LTE   GTD+ ++ S 
Sbjct: 132 QIHALEKYGDPQQKQTYLPKLIDGSWTGT-------------MNLTEPHAGTDLGSLKST 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
                D  Y + G K +++    D       ++LA++EG       +  F+VP+ L +  
Sbjct: 179 ALSEGDH-YRIKGQKIYITYGEHDMSENIIHLVLARIEGAPAGIKGISLFIVPKFLVNSD 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K+G   + T  L+F       GFL+G  N     +  M      
Sbjct: 238 GTLGVKNDVKCLSIEHKLGINGSPTTVLQFGENEGAIGFLVGQENQGLSIMFAMMNDARF 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS-------GGILIDQPVMKRAIADIALDIAAATA 371
              +  +S    +  +A  YA  R          G  +   P + R +A +  +I A   
Sbjct: 298 AVGLQGLSISNRAFHQAKSYAAERIQGIPLERKEGDTIHHHPDVMRLLASMRSEIEAMRG 357

Query: 372 LSFRLANSFDEAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++   A + D AK+  +     ++ + +M PI K W  + + ++ ++ ++  GG G+IEE
Sbjct: 358 ITIYTAAAIDLAKTNLDNNGFWSSRSELMIPIMKGWLTERSISITSDGIQVHGGMGFIEE 417

Query: 428 RSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQD---------- 475
              A+HYR++   +I  G+       L    +L        +L + + +D          
Sbjct: 418 TGAAQHYRDARILTIYEGTTAIQANDLLHRKILRDEAANILELINEIIKDAESVNQSYAS 477

Query: 476 LGSSGKKVITI---LRDSISLCKEDKGLARFLT---------------EKIALASSAAAL 517
           L  S KK++     +++ I    ++K L R L+                 + L S+ AA 
Sbjct: 478 LNFSSKKLLEATYSVKECIQYILDNKELLRELSAISVPLLMMMGTLCGGWMTLRSADAAF 537

Query: 518 YRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
            +   ++  + FLE +   N   T   L      + II
Sbjct: 538 KQKNSSNWNNDFLEAKLTYNRIYTSHCLPNIHKYSEII 575


>gi|327280200|ref|XP_003224841.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 422

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 128/379 (33%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P  +  D+           ++    G+        +         H +    +  +
Sbjct: 58  EHLAPKAQEIDQKNEFKEMKEFWKKLGELGVLGITAPAEYGGSAMGYLDHILVMEEISRV 117

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S E+                L ++
Sbjct: 118 SAAVGLSYGAHSNLCVNQLVRNGNEAQKEKYLPKLISGEH-------------IGALAMS 164

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRL 261
           E   G+D+ ++  +  +  D         W  + P +D  I+ A+ +         +   
Sbjct: 165 EANAGSDVVSMRLKADRKGDYYVLNGNKFWITNGPDADVLIVYAKTDPSAVPASQGITAF 224

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + +    G    +  +K+G R + T EL F +        L   +  V  +   + L+  
Sbjct: 225 IVEKGMPGFSTAQKLDKLGMRGSNTCELIFEDCKIPAKNVLGQLSKGVYVLMSGLDLERL 284

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           I+S   +  M+  L  A+ Y   R   G  +    +M+  +AD+   + +     + +A 
Sbjct: 285 ILSAGPLGIMQAVLDNAVPYMHVREAFGQKIGQFQLMQGKMADMYTRLMSCRQYVYNVAR 344

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D     +++             +  + A  V  + ++C+GG+GYI +  + R  R++ 
Sbjct: 345 ACDRGHFNAKD-------CAGVILYAAECATQVALDGIQCLGGNGYINDYPMGRFLRDAK 397

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     + +   
Sbjct: 398 LYEIGAGTSEVRRIVIGRA 416


>gi|163746633|ref|ZP_02153990.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161379747|gb|EDQ04159.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 380

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K E  P    L  +    G                +           MA    
Sbjct: 26  PHAHQWEKDETIP--KELWPQIGELGFGGLYVSEETGGSGLTRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P + S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDSFASDEMKARVMPGVLSM-------------NTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ ++ ++G Y L+G K F+S    SDA++ + +     G   V  +  +   
Sbjct: 131 SDAAALKTRCERTNEG-YTLNGTKAFISGGGYSDAYVTMVRTSDD-GAKGVSTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G RS  T  ++F +       L+G+                L+ +  S
Sbjct: 189 PGLSFGGLEDKMGWRSQPTALVQFDDCKIGAENLVGEEGKGFKYAMAGLDGGRLNISACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L + + Y   R   G  +     ++  +AD+ +++ AA     + A   D   
Sbjct: 249 LGAAQTALNKTLDYMGDRKAFGQSIDQFQGLQFRLADMEIELQAARTFLRQAAWKLDTGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M + V   + K
Sbjct: 363 GTNEIMRVIVARDMLK 378


>gi|313891664|ref|ZP_07825271.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E]
 gi|313119942|gb|EFR43127.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E]
          Length = 378

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 145/403 (35%), Gaps = 39/403 (9%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           ++ ++   +EL  +A     N   P+       G + D V        LL      G+  
Sbjct: 2   DFSITLEQRELIDLARNISENEIAPRALEIDKTG-KMDSV--------LLDILKKTGMTA 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               + +                          +   +  ++  V +  T      +   
Sbjct: 53  LAIPKEYGGAGLDLLTVSMITEELSKGCAGVATICMANALASYPVLIAGTEEQKSSFCNF 112

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           I                       LTE   G+D  A+    QK+ DG Y L+G K F+++
Sbjct: 113 I--------------NNGGIAAFALTEPGAGSDAGAVACYAQKV-DGGYILNGTKCFITN 157

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +++  ++    +   G   +   + D +  G+   + ++K+G R++ T E+ F + F 
Sbjct: 158 GSIAEKIVVFTNTKKTGGIRGLTAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFV 217

Query: 297 FLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G    MK L         +SV   + SL  A+ YA +R   G  +    
Sbjct: 218 PESSRLGREGMGFKIAMKTLEKSRPVVGALSVGIAQASLESAVRYAHQRKQFGSKISSFE 277

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  IAD+ +   +A AL  +     D             I +P+ K +   +A  V  
Sbjct: 278 MVQDMIADMVIKTESARALVQKACWMLDNDMPSK------GIFSPMAKAYASDVAMEVST 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +++ +GG+GY +E    ++ R++    I  G+     + + N
Sbjct: 332 ISVQVMGGNGYSKENPNEKYMRDAKVMQIYEGTNQVQKIVIAN 374


>gi|189462651|ref|ZP_03011436.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136]
 gi|189430812|gb|EDU99796.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136]
          Length = 568

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 94/469 (20%), Positives = 177/469 (37%), Gaps = 48/469 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+     A L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKANLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAQADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDGRGLSMFIYDKNDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L G+  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGERKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            EA+ YA+ R   G  +I+ P +   +A I   + A  AL ++ +   D          E
Sbjct: 309 DEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAYDCIQVHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE----QLFSTLEQDLG--SSGKKVITILRD 489
           ++   SI  G+     +  +  +  G         +L     +  G  +  K +   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGAYAATLHEYELIPCAPEFEGYLNRIKDMTRKLEA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
             +  KE +       +AR L E  A+   +  L +       ++F ++
Sbjct: 489 CTNAVKEAQNQELLDFVARRLYEMAAVCVMSHLLLQDATKA-PELFAQS 536


>gi|117927618|ref|YP_872169.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648081|gb|ABK52183.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 406

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 128/379 (33%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+    P    +       G H       +                    
Sbjct: 38  ERIAPRAAEIDRTGEFP--WDVHDVLARSGFHAPRIPEQYGGSGADALATAVIIE----- 90

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             E   + + S    ++  L T P +         + E        + K        L+E
Sbjct: 91  --EIARVCAASSLIPAVNTLGTLPLLLAG------AHELCARYLPLVAKGDAMFSYALSE 142

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+T++  +  +        +W  ++  S  + + A  +   G   +   + +
Sbjct: 143 PEAGSDAAAMTTRAVRDGEWWVLDGVKRWISNAGESRFYTVFAVTDPDAGTHGISAFVVE 202

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               GL +   + K+G R + T E+ F+         +     G    M+ L    +  A
Sbjct: 203 ADDPGLSFGPKERKLGIRGSPTREMSFAGCRIPEWRIIGAPGDGFSLAMRTLDHTRVTIA 262

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L  A+ Y  RR   G  + +   ++  +AD+A+ I AA AL++  A   +
Sbjct: 263 AQAVGIAQGALDAAVGYTSRREQFGQPVAEFQGVRFTLADMAMRIEAARALTYVAAAHSE 322

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                              K +   +A AV  +A++  GG GY ++  + R  R++    
Sbjct: 323 RGNGD------LGYFGAAAKCFASDVAMAVTTDAVQLFGGYGYTQDYPVERMMRDAKITQ 376

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   + +
Sbjct: 377 IYEGTNQIQRVVIGREVLR 395


>gi|260365626|ref|ZP_05778147.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
 gi|308111453|gb|EFO48993.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
          Length = 389

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 134/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P     D     P+   L       GL        +    +   AH +    +   
Sbjct: 29  EHIAPIAADIDHYNQFPSH--LWPLLGEMGLLGVTVSEEYGGAEMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPTQREKYLPKLVDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EVNSGSDVVSMQLKAEDKGDHFLLNGTKMWITNGPDADVVVVYAKTDADAGSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           + S  G    +  +K+G R + T EL F+N        L      VE +        +  
Sbjct: 194 ERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  ++   +AD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVHGKLADMYSRMSAAKAYVYTVATAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQIALDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|325299703|ref|YP_004259620.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170]
 gi|324319256|gb|ADY37147.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170]
          Length = 569

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 92/461 (19%), Positives = 170/461 (36%), Gaps = 47/461 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAQADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATYDEANQCWRLNGVKRFITNGDANLHLVLARSEEGTHDGRGLSMFIYDKNDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D          E
Sbjct: 309 DEGLAYAKDRKQFGKAIIEFPAVYDMLATMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLE-QDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+       +E +    E Q      K +   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLHEYEAIPCAPEYQGYMDRLKAMTGKLEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAGMND 524
             +  KE +        +R L E  AL   +  L +     
Sbjct: 489 CTTKVKEAQNQELLDFTSRRLYEMAALCVMSHLLLQDANKA 529


>gi|152986136|ref|YP_001346285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961294|gb|ABR83319.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 593

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 95/576 (16%), Positives = 190/576 (32%), Gaps = 62/576 (10%)

Query: 33  GMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQLHA 86
             NA   D   L+  + + P++  + L  L E + + TA  +   A   T     P   +
Sbjct: 3   DYNAPLRDMRFLLNDVFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLNRS 61

Query: 87  YGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               G +W    V     +          G      + +   +   +   ++   +   A
Sbjct: 62  GDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMYAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S  +   +    +  +   + P +++  +             A  + LTE
Sbjct: 122 NASFSLYSTLSAGACLALDAHGSEELRNRYLPNMYAGTW-------------AGSMCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++         +
Sbjct: 169 PHAGTDLGMIRTRAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSRGI 228

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N     
Sbjct: 229 SLFLVPKFLVGDDGALGARNPVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGLAA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   I  +    +S   A+ YAR R  S               +I  P ++
Sbjct: 289 MFTMMNYERLSIGIQGIGCAEMSYQGAVAYARERLQSRAPTGPVAKDKAADPIIVHPDVR 348

Query: 357 RAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +        A          LA   ++ + RS+  A   ++ P+ K +       
Sbjct: 349 RMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTGLE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
                 +  GG GYI E    +  R+     I  G+     LD++   ++  G       
Sbjct: 409 SCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLSIF 468

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMND 524
              +      +G  +       ++       L + +  +         +A+  Y      
Sbjct: 469 SREVRAFAAGAGAGLAEFTTPLLAALDLLDNLTQGIVARAGNDPREIGAASVEYLHLFGY 528

Query: 525 IADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
            A  +L  R                +        Y 
Sbjct: 529 TAYAYLWARMAAAALRQRDADPAFHDGKLATARFYF 564


>gi|171060702|ref|YP_001793051.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170778147|gb|ACB36286.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 596

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 82/430 (19%), Positives = 163/430 (37%), Gaps = 60/430 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +     + +  G      D ++      Q   +      ++        M P +
Sbjct: 75  VRAPAGYKQAYAQYVEGGWASLSCDPAYGGQGLPQ--VVNQCFYEMLNSANQAWTMYPGL 132

Query: 157 TSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  AL    TP     + P++ S E+                + LTE   GTD+  +
Sbjct: 133 SHGAYEALHAHGTPEQQATYLPRLTSGEW-------------TGSMCLTEPHCGTDLGLL 179

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++ + ++DG Y ++G+K F+S+   D       ++LA++ G       +  F+VP+   
Sbjct: 180 RTKAEPLADGSYAITGNKIFISAGEHDLAANIVHLVLARLPGAPEGSKGISLFVVPKFNV 239

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
           +     G+ NG+    L++K+G   NAT +L      G L+G+ +     +  M     L
Sbjct: 240 NADGSLGARNGIWCGGLEHKMGIHGNATAQLVLDGAVGTLVGEPHKGLAAMFVMMNAARL 299

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              + S+    V+   A+ YA+ R                  +I  P +++ +       
Sbjct: 300 GVGMQSLGLTEVAYQNAVAYAKDRIQMRALTGPKALDKPADPIIVHPDVRKMLLTARAYA 359

Query: 367 AAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIG 420
               AL    A   D+  S  +EA          ++ PI K +         +  ++  G
Sbjct: 360 EGGRALCVHTALMLDQELSHPDEAVRRASADEVALLTPIVKAFLTDNGWIATSHCLQVFG 419

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G GYI E  + ++ R++  N I  G+     LD+L           ++ +   + L + G
Sbjct: 420 GHGYIREWGMEQYVRDARINMIYEGTNTIQSLDLLG---------RKVLADNGRKLKAFG 470

Query: 481 KKVITILRDS 490
           ++V  ++ + 
Sbjct: 471 RRVADLIDEE 480


>gi|271962887|ref|YP_003337083.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270506062|gb|ACZ84340.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 387

 Score =  262 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 130/379 (34%), Gaps = 19/379 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+    P    + +  +   +H       +          +        A
Sbjct: 25  EKIAPRAAEADETGEFP--WDVYKALVAADMHAVHVPEEYGGAGADALATVIVIEEVARA 82

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  + + +      + L  +  V + +              AP+ +        L+E
Sbjct: 83  CASSSLIPAVNKLGTVPLLLSASEEVKQRYL-------------APVARGEAMFSYALSE 129

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++     D         W  ++ +S+ + ++A  E   G   +   + +
Sbjct: 130 AEAGSDAAAMKTRAVADGDHYVLNGAKMWITNAGVSEYYTVMAVTEPGAGARGISAFVVE 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            S  G+ +   + K+G + + T ++   N       ++G+                +  A
Sbjct: 190 KSDEGVSFGPKERKLGIKGSPTRQVILENVRIPASRMIGEPGTGFKTALATLDHTRITIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + +L  A+ Y + R   G  + +   ++  IAD+A+ + AA  L++  A +  
Sbjct: 250 AQALGIAQGALDYAVGYVKERKQFGKAVAEFQGVQFMIADMAMKLEAARQLTY-AAAAKS 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E     E        +   K      A  +  +A++ +GG GY  +  + R  R++    
Sbjct: 309 ELAMHGEPQKDLTFFSSAAKCAASDAAMEITTDAVQLLGGYGYTGDYPVERMMRDAKITQ 368

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 369 IYEGTNQIQRMVMARQLLK 387


>gi|121594363|ref|YP_986259.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120606443|gb|ABM42183.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 388

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 146/407 (35%), Gaps = 31/407 (7%)

Query: 63  EYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +  A  A      +L  +      WD     P     + R+   G       
Sbjct: 2   DFELSEDQRAFADTARQFAQAELAPH---AAEWDAQGIFP--REAICRAGELGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            S   +   +                    ++    +  M+    T  V  +W   + S 
Sbjct: 57  ESAGGLALPRLDATLVFEELAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEALASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS- 240
                               LTE   G+D A+I ++ + + +  Y ++G K F+S   S 
Sbjct: 117 -------------QKLASYCLTEPGAGSDAASIKTRAELVGNE-YVINGSKAFISGAGST 162

Query: 241 DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           D  +++A+  + + G   +       +  G+ Y + + K+G  S  T ++ F N      
Sbjct: 163 DVLVLMARTGDAQSGAGGISAFAVPANLPGIHYGKKEEKMGWNSQPTRQISFDNVRIPAN 222

Query: 300 GDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L     G    MK L    ++ A  SV   + +L  A  Y + R   G  +     ++
Sbjct: 223 HLLGQEGEGFKIAMKGLDGGRINIATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQ 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A ++ AA  +    A+  D        A  A     + K +   +   V+ EA+
Sbjct: 283 FKLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDVGFNVVNEAL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +  GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 337 QLHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIGRRMLDGDA 383


>gi|152986838|ref|YP_001346001.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961996|gb|ABR84021.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 601

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 83/488 (17%), Positives = 178/488 (36%), Gaps = 54/488 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            +++   +E A+        L+      G  W  + V+    +    ++ +  G      
Sbjct: 37  DMVNAILEEGAKFCEQVIAPLNRVGDLEGCTWSAEGVKTPSGFKEAYQQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D         ++  +  + +   A    G     S  + + +    T      +  K+ S
Sbjct: 97  DVEHGGQGLPESLGLAISEMVGQANWSWGMYPGLSHGAMNTLHAHGTAEQQATYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L +     G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPQGTKGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        L +A+  ++   V     I YAR R  
Sbjct: 264 ATCVMNFDAATGFLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQ 323

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +        A+ +  A   D      + + +
Sbjct: 324 MRSLTGPKAPEKPADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQK 383

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               +    + PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 384 KAADSMLAFLTPIAKAFMTEVGFESANHGVQIYGGHGFIAEHGMEQNVRDSRISMLYEGT 443

Query: 447 GNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                LD+L   +L       +     + +   ++  +    +++ ++   +       L
Sbjct: 444 TGVQALDLLGRKVLMTQGEALKGFTKIVHKFCQAN--EANEAVKEFVAPLAQLNKEWGDL 501

Query: 505 TEKIALAS 512
           T K+ +A+
Sbjct: 502 TMKVGMAA 509


>gi|269962588|ref|ZP_06176935.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832701|gb|EEZ86813.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 389

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 140/378 (37%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  E  D+    P  + L  +    GL     D  F        AH +    +   
Sbjct: 29  EHIAPIAEDIDRDNQFP--NHLWSKFGEMGLLGVTVDEEFGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    +P   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGSPAQREKYLPKLIDGSH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNSGSDVVSMQLRAEDKGDHFLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  +K+G R + T EL F +       +LG+LN     +        +  
Sbjct: 194 ERDFEGFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  + E + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMNAAKAYVYAVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECTRKDAAG-------VILYSAELATQMSLDAIQLLGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|308449818|ref|XP_003088087.1| hypothetical protein CRE_12446 [Caenorhabditis remanei]
 gi|308249638|gb|EFO93590.1| hypothetical protein CRE_12446 [Caenorhabditis remanei]
          Length = 593

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/534 (16%), Positives = 190/534 (35%), Gaps = 58/534 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRS 110
            +++L  +         +E+A+ A   T  L       G  ++  KV     +    ++ 
Sbjct: 27  ANEKLAHVDAATAEAILEEMAKFAQNVTLPLNRTGDEEGAHYENGKVTTPAGFKEAFQQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  +      +   + A  +              SV +   +    +   
Sbjct: 87  AEGGWIGLGAEEEWGGQAMPKMLTVLADEMLFATNPSFMLYPLLSVGAGMALNSYASQEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI+S E+  T             + LTE   GTD+  I ++ +   DG Y ++G
Sbjct: 147 KETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNQDGTYNITG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+          +  F+VP+ L +     G  N      
Sbjct: 194 TKIFITGGDHDLADNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSLGERNTAGPGS 253

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    GFL+G  N     +  M     L   I  +     +   
Sbjct: 254 IEHKMGIKASATCVMNFDAAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEYAYQN 313

Query: 335 AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A  YA  R                  ++    ++R + +   +  A+ A +  +    D 
Sbjct: 314 AAQYATDRVQGRSATGVKSPNKPADSILVHGDVRRMLLNARANNEASRAFAVYVGQQLDI 373

Query: 383 AKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            K  ++  A A+       + PI K +    A     +A    GG GYI E  + +  R+
Sbjct: 374 TKFSTDPEAVAKANNRVALLTPIAKAYLTDTAFNAAIDAQMVFGGHGYIREWGMEQCVRD 433

Query: 437 SPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS-ISL 493
                I  G+      D++    ++       +    + +D  +     +  ++D+ + +
Sbjct: 434 LRIAQIYEGTNGVQSQDLIGRKTIKCNGEFIAEYIEEI-RDFANGLDTDLNFIKDATLDI 492

Query: 494 CKEDKGLARFLTEKI---ALASSAAAL-YRAGMNDIADVFLENRFLDNCHSTHC 543
             E   + + + E+    A  ++AAA+ Y   +  ++  ++  R  +   +   
Sbjct: 493 ATEVDMITQHILERAKENADFANAAAVEYLHVVGLLSFSYMFARIANAAKNKQG 546


>gi|239994396|ref|ZP_04714920.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 586

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 84/486 (17%), Positives = 170/486 (34%), Gaps = 67/486 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           I++F S +  E+   G          L R  +     L            +     +   
Sbjct: 30  ISDFDSELANEIIAQGAKFALDVVAPLNREGDEEGCTLKD--------GSITTPKGFADA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +  + +G +  +    ++         +    +   A L        + ++   V    
Sbjct: 82  YQEYVANGWNAMLGTAEYDGQDLPYTMAVPVHEMLNAANLSWRLTTMLTESATLAVTKHA 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S E+  T             + LTE   GTD++ ++++ +   DG Y
Sbjct: 142 SKELKDIYLAKLISGEWTGT-------------MNLTEPHAGTDLSLLSTKAEPQGDGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            ++G+K F+++   D       ++LA++         +  FLVP+ L D     G  N L
Sbjct: 189 KVTGNKIFITAGDHDWSSNVIHLVLARLPDAPKGVKGISLFLVPKFLPDASNEPGEANSL 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++ T  + F    G+L+G+ N     +  M         +  +     
Sbjct: 249 SVGSIEHKMGIKASPTCVMNFDGATGYLVGEENQGLACMFTMMNDARFQVGLQGLGAAEA 308

Query: 331 SLAEAIHYARRRHVS----------GG--ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   A+ YAR R  S          G    ++ QP + R +      I    ALS   A 
Sbjct: 309 SYQGALTYARERVQSRAPQGIQNPEGKADPIVFQPDVARMLLTQKSLIEGCRALSLFYAK 368

Query: 379 SFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             D     E + + +     + + PI K +   M     +  ++  GG G+I E  + + 
Sbjct: 369 FMDVEKLGEGQEKEDADKILQFLTPICKAFMTDMGLETTSLGVQVFGGHGFIREWGMEQL 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            R+     +  G+     LD++                L +D G   +         +S 
Sbjct: 429 MRDVRIAMLYEGTNGIQALDLIG-------------RKLTRDGGQMMEATYNAFNALVSD 475

Query: 494 CKEDKG 499
            ++ + 
Sbjct: 476 IQDSEA 481


>gi|113867310|ref|YP_725799.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526086|emb|CAJ92431.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 379

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 137/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G + D+            ++  +GL C      +        H    A  Y
Sbjct: 29  PRQAEWDKAG-KVDR--------ETWLKAGREGLLCVTLPTEYGGGGGDFGHSAIYAEEY 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L        S   A  +A +      + W PK+ S EY              + +G
Sbjct: 80  ARAGLSGVGFGVHSDIIAPYIARIGNEEQKQRWLPKVCSGEY-------------ILAIG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ AI +   +  D  Y ++G K F+S+ + +D  IM+ + +   G   V  
Sbjct: 127 MTEPGTGSDLKAIRTTATRDGDE-YVINGSKTFISNGLNADLIIMVCKTDPTAGARGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R  +K+G  +  T EL F N       LLG+       +        
Sbjct: 186 IVVEAEREGFRRGRKLDKVGQHAQDTAELFFDNVRVPVANLLGEEGKGFAYLMAELPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ + + + V L   + Y + R      + D    K  +ADI     +   L     
Sbjct: 246 LSIAVSAAAKLEVCLEHTLAYVKDRKAFSQTVWDFQNTKFKLADIKTQAISVRLLVDHYL 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                 +   EEAA       I K    ++    + + ++  GG GY+ E  +AR + + 
Sbjct: 306 GEHIRRRLTLEEAA-------IAKLHATEVLGTALDQMVQLHGGYGYMMEYPVARAFADM 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M   +   L
Sbjct: 359 RVTRIYGGTSEVMRDLIARKL 379


>gi|71282231|ref|YP_267920.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
 gi|71147971|gb|AAZ28444.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea
           34H]
          Length = 598

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 84/488 (17%), Positives = 176/488 (36%), Gaps = 58/488 (11%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A+       P   +    G  W   +V     +    ++ +  G      
Sbjct: 36  DMVDAIISEAAKFTEQVIAPINQSGDEQGCTWTNGEVTTPDGFKEAYQQYVEGGWPTLAQ 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKI 178
           +  F        H +  A   L +       M P ++  ++  +    + +    + PK+
Sbjct: 96  NVDFGGQGLP--HSLNTAITELFSSANHSFAMYPGLSHGALATIEAHGSEQQKNQFIPKL 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE   GTD+  + ++ +   DG Y L+G K F+S+ 
Sbjct: 154 VEGSWTGT-------------MCLTEPHCGTDLGMLRTKAELNDDGSYSLTGTKIFISAG 200

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNR 282
             D       I++A++ G       +  F+VP+       E    N +    +++K+G  
Sbjct: 201 EHDLSDNIVHIVIARIPGSPEGSKGISLFIVPKFNVTNEGETSDRNAVNCGSIEHKMGIN 260

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           +NAT  + F    G+L+G++N     +     +  L  A   V+    S   A+ YA+ R
Sbjct: 261 ANATCVINFDGAKGYLIGEVNRGLNCMFTFMNVARLGVATEGVAAAEASFQGALAYAKDR 320

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----- 385
                             +I  P ++R +           AL   LA   D   +     
Sbjct: 321 LQMRSLSGVKNPDGPADAIIVHPDVRRMLLTQKSIAEGGRALIAYLAQLVDIGHASTCEE 380

Query: 386 -RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            ++   A   ++ PI K +  ++     +  ++  GG G+I+E  + +  R++  + +  
Sbjct: 381 EKATAEAKLALLTPIAKAFLTELGLECTSHGVQVFGGHGFIKEWGMEQLMRDTKISCLYE 440

Query: 445 GSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDL--GSSGKKVITILRDSISLCKEDKGL 500
           G+     LD+L     G    + +   S + +     +    +   ++  +S   + + +
Sbjct: 441 GTTGIQALDLLARKILGSKGKILKPFGSEVTKFCLENAEDDAMQEFIQPIMSFGGDWQKM 500

Query: 501 ARFLTEKI 508
              + EK 
Sbjct: 501 TEKVGEKA 508


>gi|302523398|ref|ZP_07275740.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302432293|gb|EFL04109.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 393

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 135/398 (33%), Gaps = 26/398 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS   QE  R A  +  +     P     D+    P  H         GLH +     
Sbjct: 16  YELSALHQEF-RAAARDLAR-KELAPRSAEVDERGGFP--HDTYAILTAAGLHATGIPEE 71

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +            A      A   +  +++ +    + + L  T    + + P++ + E 
Sbjct: 72  YGGDGVDALAAALAVEEVARACASSSTVLTSNKLGVTPLLLHGTEEQKRRYLPEVAAGE- 130

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                         +   ++E+  G+D+ A+  +  +  DG        W  S+ ++   
Sbjct: 131 ------------ALMAYAISEREAGSDVGAMRCRATEDGDGWVLDGVKTWITSAGVARYL 178

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           ++ A  +   G   +   +      G+ Y   + K+G + + T E+ F  T    G LLG
Sbjct: 179 VVFAVTDPGAGSRAISAFVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLG 238

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +                +     ++   + +L  A+ Y + R   G  + D   ++  +A
Sbjct: 239 ERGRGMRVALGTLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + +A  L +  A                       K      A AV  +A++ +G
Sbjct: 299 DMAVRVESARQLVYAAAARSASRAPD------LTYFGAAAKCLASDTAMAVTTDAVQLLG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY  +    R  R++    I  G+     + +   L
Sbjct: 353 GYGYTRDFPAERMMRDAKITQIYEGTNQIQRVVIARQL 390


>gi|294627476|ref|ZP_06706059.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598107|gb|EFF42261.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 387

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 144/392 (36%), Gaps = 32/392 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           + +A  A+++   L          D V   PA   L R     GL     + ++      
Sbjct: 19  ESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLLGEQGLLGLTVEDAYGGSGMG 70

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             AH +    +            + S    + +    +    + + PK+ S E+      
Sbjct: 71  YLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASHEQKQRYLPKLCSGEH------ 124

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                     L ++E   G+D+ ++  +     D         W  + P +D  ++ A+ 
Sbjct: 125 -------VGALAMSEAGSGSDVVSMKLRADARGDRYVLNGSKMWITNGPDADVLVVYAKT 177

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   + +    G    +  +K+G R + T EL F++        L    G V
Sbjct: 178 DPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPAENVLGTLNGGV 237

Query: 310 EDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +   +  +  +++   +  M  ++   + Y   R   G  +    +M+  +AD+ + +
Sbjct: 238 RVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLMQAKLADMYVGL 297

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A  + +A + D  ++  ++AA A         +  + A  +  +A++ +GG+GYI 
Sbjct: 298 NACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQAIQVLGGNGYIN 350

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +    R +R++    I  G+     + +   L
Sbjct: 351 DYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|149914567|ref|ZP_01903097.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149811360|gb|EDM71195.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 387

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 141/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    P+   L R     GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQERVKPLAGAIDRDNDFPS--DLWREMGDLGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  TP   + + P + S     
Sbjct: 67  ADMSYLAHVIAIEEIARASASVSLSYGAHSNLCVNQIKLNGTPEQKEKYLPGLVSG---- 122

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                    +    L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 123 ---------AHVGALAMSEAGAGSDVVSMKLRAEKRNDHYKLNGTKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + +  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPDAGSKGITAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GRGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYMAERKQFGQPIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G++ +  +AR +R++    I  G+     + V   L     
Sbjct: 347 GFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMGAMG 387


>gi|161522396|ref|YP_001585325.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189348728|ref|YP_001941924.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345949|gb|ABX19033.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189338866|dbj|BAG47934.1| putative acyl-CoA dehydrogenase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 596

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/517 (19%), Positives = 193/517 (37%), Gaps = 63/517 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFCGE---VLAPLNVDGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFREAFRQFVEGGWQGLQHPTDYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRGL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      PI K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  +   L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKE-DKGLARFLTEKIALASS 513
           + GK          +  ++  + L+  +   +A A  
Sbjct: 475 ALGKLDGAAAASMKAQLEQGAQALSSVVDYVLANAKQ 511


>gi|304393471|ref|ZP_07375399.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303294478|gb|EFL88850.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 599

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 97/514 (18%), Positives = 200/514 (38%), Gaps = 65/514 (12%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWDKVE-FHPAWHALLRRSIHDGLHC 117
           L E +L+   +E AR A      L   G   G    D V      W  L R     G + 
Sbjct: 31  LSEDLLAAIVEEGARFAGDEIAPLSRAGDEQGAHVKDGVVSLPDGWADLYRNWAEGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 F       + +I A  ++    L      + ++ +   +    +  +   +  K
Sbjct: 91  LSGPEGFGGQGLPMSLQIAAFEMWNSGSLAFAIGPTLTIGAIEAIDAHASDELKAIYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+ A+ S+ + + DG Y + G K +++ 
Sbjct: 151 LVSGEWTGT-------------MNLTEPQAGSDLNALKSRAEPVGDGSYRVFGQKIYITY 197

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
              +       ++LA++         V  FLVP++LEDG+ N +    +++K+G  ++ T
Sbjct: 198 GEHEMTDNIVHLVLARLPDAPAGQRGVSLFLVPKVLEDGTRNDVYCHSVEHKLGIHASPT 257

Query: 287 VELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + + +          G+L+G+ N     +  M     +  AI   +    +  +A+ Y
Sbjct: 258 CTMLYGDGKFGDEPGAIGWLIGEENRGLACMFTMMNNARIMVAIQGTAVAEAATQKALAY 317

Query: 339 ARRRHV-----SGG----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A+ R         G     +I  P ++R IA +     A+  +++  A++   A   +  
Sbjct: 318 AQERRQGKAEGFDGEGMAPIIHHPDVQRNIATMRALTNASRTIAYNCAHAIARADELNHA 377

Query: 390 AAY---------------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +A                A ++ P+ K +   +   V +  ++  GG G++EE   A+  
Sbjct: 378 SARNGGEPTPEMPFWQNRAALLTPVAKAFATDIGCEVASIGVQVHGGMGFVEETGAAQLL 437

Query: 435 RESPANSILLGSGNAMVLDVLNL---LEKGTNL---FEQLFSTLEQDLGSSGKKVITILR 488
           R++    I  G+     +D++     L+ G ++     +L   +E+  GS+   +  +  
Sbjct: 438 RDARIAPIYEGTNGIQAIDLVTRKLPLDGGEHVRGYIGELRDMIEEVRGSNRADLNGVAD 497

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
                  +      +L +++A    ++AL  A  
Sbjct: 498 ALSEGLDDLLAATEWLLDRMAAGEKSSALSGATP 531


>gi|327438662|dbj|BAK15027.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 380

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 141/386 (36%), Gaps = 37/386 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-L 140
           P    +       D+      W  L      +G  C +    +  +     +       L
Sbjct: 25  PYFEQW-----EKDRDIPRDFWLKL----GENGFLCPMVSEEYGGLALDFGYSAILTEEL 75

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +    A  +   S      +    T    + W PK  + EY                +
Sbjct: 76  ERVGAGLASGISLHSDIVTPYIEAYGTAAQKEKWLPKSVTGEY-------------ISAI 122

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFL 257
            +TE   G+D+A I +  +K  D  Y L+G K F+++ + +D  +++ + + +       
Sbjct: 123 AMTEPGAGSDLAGIQTTAKKDGD-FYILNGEKTFITNGIHADYVVVVCKTDPQASPAYKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +  L+ +    G    +  +KIG  S  T EL F +       LLG+ N     + +   
Sbjct: 182 ISLLIVESGTAGFKRGKKLDKIGMHSADTGELIFEDVRVPAENLLGEENRGFYYLMEKLQ 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ +       L   + Y + R   G  + D    +  +A++A +I        
Sbjct: 242 QERLIVALETQIEAECCLKLTVDYVKERKAFGSRIADFQNTQFKLAEMATEIDLGRTYVD 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L       +   +E + A+        W  +MA  V+A+ ++  GG GY+EE  IAR Y
Sbjct: 302 SLIAKHIAGQDIVKEVSMAKW-------WISEMAKRVVADCLQLHGGYGYMEEYEIARRY 354

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R+ P  +I  G+   M   +   + K
Sbjct: 355 RDIPVAAIYAGTTEIMKGIIAKQIIK 380


>gi|222479632|ref|YP_002565869.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452534|gb|ACM56799.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 381

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 140/375 (37%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P     D+ +  PA   L+      GL    +   +E       ++ I  A +   +   
Sbjct: 26  PRAAEIDETDEFPA--DLIDEMAELGLMGMPFPVEYEGAGLDYHSYAIGLAEIARGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+      R  + +   + + E                   L+E   
Sbjct: 84  GTIVAAHTSLAGNMLYEFGDERQKETYLTALNTGE-------------DIGAFALSEAEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+++  ++  DG     G  W  +  ++D   + A+ +   G   +   +     
Sbjct: 131 GSDVPAMSTAAERDGDGYLVNGGKLWISNGSVADTVTLFAKTDPDAGRKGISSFVVRPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK--ILIYLDSAIM 323
            +G   +  ++K+G++   T EL F + +      L       V+ +K      +  A  
Sbjct: 191 DDGFIVEGTEDKLGDKGCPTAELRFDDLWIPEERRLGEEGEGFVQALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   R +L EA  YA+ R      + D   ++  +AD+     AA  L    A+     
Sbjct: 251 SVGIARAALDEAKSYAQEREQFDSPIADFQAIQHKLADMDTKARAAELLMHEAADLKIRD 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EAA A       K +  +++  V  E ++  GG GY ++    R YR++  N I 
Sbjct: 311 EDYIKEAAQA-------KLYASEISREVANEGIQIHGGYGYTKDFPAERFYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   +   +   L
Sbjct: 364 EGTSEVLRNTIAQKL 378


>gi|319764945|ref|YP_004128882.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317119506|gb|ADV01995.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 382

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 133/369 (36%), Gaps = 20/369 (5%)

Query: 91  GERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            +R D+++    + H +       GL    +   +       +  I    L  +    A 
Sbjct: 25  AQRADEIDRTAEYPHDMYALLKELGLFTLPFPTEYGGTGSMLSACIAIEELARVCYNTAY 84

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L+   V     +    T        P + S E                    TE + G+
Sbjct: 85  LLLVQWVPFG-AILHGGTDEQKGRLLPGLASGEMRG-------------AFSTTEAQSGS 130

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D++ I ++  K+  G        W  +S ++D  ++ A+ E + G   +   + +    G
Sbjct: 131 DVSGIRTRAVKVQGGYRINGAKIWCTNSDLADFVLVAAKYE-QGGKDGISLFIVERGTPG 189

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
               + ++KIG R   +  L   + F      +      V +             V   +
Sbjct: 190 FTVGKKEDKIGARGVPSCPLFLDDVFVPEHNLVGGGFKAVMEAFNASRPLIGARGVGLAQ 249

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            ++  A  + + R   G  + D   ++  +AD+A+   AA  L +R A+  D+A   +E 
Sbjct: 250 GAIDHASAFIKERRAFGQQICDFQGVRWMLADMAIQTEAARHLVYRAASLVDQAAPSAEL 309

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A     +A + K +    A  V  +A++  G +G   E  I R++R++    I+ G+   
Sbjct: 310 A----PIAAMAKCFASDTAMKVATDAVQLFGAAGVSSEYPINRYFRDAKVLQIIEGTNQI 365

Query: 450 MVLDVLNLL 458
               V N L
Sbjct: 366 QRNIVANSL 374


>gi|146339215|ref|YP_001204263.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192021|emb|CAL76026.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 592

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/524 (20%), Positives = 203/524 (38%), Gaps = 71/524 (13%)

Query: 46  LIANFPSVVHKELEL--LGEY---VLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           L  N  + +   +E    G++   + +   +E  + A      L+      G +    KV
Sbjct: 12  LALNHGAGLKAAVEAGHYGDFEPDITAAVLEEAGKFATDVLAPLNKVGDINGIKLADKKV 71

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P W    +R    G +      +        A  I AA   + +       + P +T
Sbjct: 72  TTAPGWPDAYKRWTEAGWNAVSGPEAHGGQGLPLA--INAACTEIWSAANVAFGLCPLLT 129

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
            +++ AL    +  + + +  K+ S E+  T             + LTE + G+D+ A+ 
Sbjct: 130 LSAIEALDAHGSEELKEIYLGKLISGEWTGT-------------MQLTEPQAGSDVGALR 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           ++ ++ +DG Y ++G K +++    D        +LA++         +  FLVP+ L +
Sbjct: 177 TRAERAADGTYRIAGSKIYITYGEHDMTDNIVHFVLARLPDAPAGTKGISLFLVPKFLVN 236

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                G+ N +    +++K+G  ++ T  +   +     G+L+G+ N     +  M    
Sbjct: 237 ADGSLGARNDIYATGVEHKLGMHASPTCTMTMGDNGGAIGYLIGEENAGMRCMFTMMNQA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIA 367
            L   +  V     +  +A+ YA+ R               +I  P +KR +  +    A
Sbjct: 297 RLGVGLEGVGVADRAYQQALAYAQERRQGRAVGSKGAGSDAIIAHPDVKRMLMQMRSLTA 356

Query: 368 AATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A+ ++ +  A + D A        R+E AA   ++ PI K +   +   V    ++  GG
Sbjct: 357 ASRSICYATAVALDVAVRAKDPVVRAEAAARGALLTPIAKAFSTDIGNEVAYLGVQIHGG 416

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL------- 472
            G+IEE   A+HYR++   +I  G+       L    L   G     +L   L       
Sbjct: 417 MGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGASVFKLLDELTEIVRRV 476

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
           E     +     T LRD++         +R+L EK+  A + A 
Sbjct: 477 EASNDPAFGTTGTKLRDALGALDR---SSRWLLEKLGTAPNDAL 517


>gi|289668680|ref|ZP_06489755.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 597

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/527 (17%), Positives = 182/527 (34%), Gaps = 69/527 (13%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
                     D L   AL A                ++    +E  R  +     L++  
Sbjct: 7   PLTDFRFALHDVLGAQALFARLGYADAST------DIIDAVLEEAGRFTSQVLAPLNSVG 60

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G  +DK    V   P + A   + +  G +    +  F          +  + +   
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPRFGGQGMPHTLGVPLSEMINA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G+    S  +   +           +   +    +  T             + LT
Sbjct: 121 ANLAWGNFPLLSHGAMEALRQHGEAWQQDVFLKPLIDGRWTGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         
Sbjct: 168 EPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTENIVHLVLAKLPDAPAGAKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G  +    
Sbjct: 228 ISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQ 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L   +  +     +   A+ Y+R R  S               +I  P +
Sbjct: 288 AMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I      +  L+   A+  D A        R++       + PI+K    + + 
Sbjct: 348 RRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPISKACQTEWSI 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQ 467
                A++C GG GYI E  + +  R++   +I  G+     LD++      +     + 
Sbjct: 408 ENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKL 467

Query: 468 LFSTLE-----QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             + +E     QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 468 FLADVETFAKAQDGNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|313225748|emb|CBY07222.1| unnamed protein product [Oikopleura dioica]
          Length = 643

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 126/374 (33%), Gaps = 25/374 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                  DK +  P     +R     G+        F            AA         
Sbjct: 283 DSHAFEIDKNDHFPQLREYIRNCGKMGILGLTVPEKFGGTDLGYFSIALAAEENARVNAG 342

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A    + S    + +    +    +   P   +               +  GL +TE  
Sbjct: 343 IAMTTGACSNLFINQIVRNGSEEQKETLLPDHVAG-------------KLMGGLAMTELN 389

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDG 265
            G+D+ ++ +   K  D         W  + P++D  ++ A+          +   + D 
Sbjct: 390 AGSDVMSMKTNAVKKGDFYVINGNKFWITNGPVADHIVLYAKTNPSSNDGRSITAFIIDT 449

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G   Q +  K+G R + T +L F N       +L         +     +  + +A 
Sbjct: 450 KTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAVLMSGLNIERILAAA 509

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V   + ++  A  YA  R      + +  +++  +AD+   ++A  +  + +A   D+
Sbjct: 510 IPVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLSACRSYLYNVARHADK 569

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + + A           +C + A  +  +A++ +GG+G+I +    R+ R++    I
Sbjct: 570 NEPTNHDCAGL-------VLYCAEKATQICLDAVQILGGNGFINDYPTGRYLRDAKLWEI 622

Query: 443 LLGSGNAMVLDVLN 456
             G+     + V  
Sbjct: 623 GAGTSEVRRVIVGR 636


>gi|240167759|ref|ZP_04746418.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 152/402 (37%), Gaps = 39/402 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E V++ TA   A              P    WD     P    +LR +   G+       
Sbjct: 8   ERVITETAAAFAE---------KRLAPYALEWDASNHFPV--DVLREAAELGMAAIYCRD 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  ++   +R      +A       +S     A M+    T    KDW P++ +  
Sbjct: 57  DVGGSGLRRLDGVRIFEQLAIADPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM- 115

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                        V     LTE   G+D +A+ ++  +     Y L G K F+S   + D
Sbjct: 116 ------------DVIASYCLTEPDAGSDASALGTRAVQHGSD-YVLDGVKQFISGAGASD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   + +    GL +  L+ K+G  +  T ++            
Sbjct: 163 VYVVMART-GADGPRGISAFVIEKGTAGLSFGALEEKMGWHAQPTAQVILDGVRVPADAM 221

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L  + G      I +       L+ A  S+ G + +  +A  Y R RH  G  L+D+P +
Sbjct: 222 LGGADGEGAGFGIAMNGLNGGRLNIAACSLGGAQAAFDKAGVYVRERHAFGASLLDEPTV 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  +  +  L +R A++ D       +AA    +  + K +       V  +A
Sbjct: 282 RFTLADMATGLETSRMLLWRAASALDC------DAADKVELCAMAKRYVTDTCFEVADKA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           ++  GG GY+ E  + +  R+   + IL G+   M + +   
Sbjct: 336 LQLHGGYGYLREYGLEKIVRDLRVHRILEGTNEIMRVVIGRA 377


>gi|239983661|ref|ZP_04706185.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455471|ref|ZP_06594861.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291358420|gb|EFE85322.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 382

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 146/380 (38%), Gaps = 27/380 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +A  +          
Sbjct: 24  HLAPHALDWDRDKHFPVG--VLRKAAGLGLGGVYVREESGGSGLSRADGVLVFETLASGC 81

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+     P   +   P++ + E                   LTE 
Sbjct: 82  PSIAGYLSIHNMVAWMIDRYGDPDQRERLLPRLCAME-------------DLASYALTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA+T++  +  DG + L+G K F+S   +   ++++A+  G  G   +   L D
Sbjct: 129 GAGSDAAALTTRAVRERDG-WALTGVKQFISGAGAAQVYVVMARTGGE-GAEGISAFLVD 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T ++         G LLG          +      L  A
Sbjct: 187 KDDPGVTFGPNERKMGWNAQPTRQVILDGARLPAGRLLGREGEGFRIAMNGLNGGRLGIA 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL  + A + D
Sbjct: 247 ACSLGGARSALDRSLAHLADREAFGTRLLDAQALRFRLADMATELAAARALVQQAAQALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   +      A  +  + K +      +V  +A++  GG GY+ E  I +  R+   + 
Sbjct: 307 QGDPQ------APYLCAMAKRFATDTGFSVADQALQLHGGYGYLSEYGIEKIVRDLRVHQ 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL GS   M + V   L + 
Sbjct: 361 ILEGSNEIMRVIVARGLTEA 380


>gi|229543304|ref|ZP_04432364.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229327724|gb|EEN93399.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 594

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/461 (19%), Positives = 171/461 (37%), Gaps = 69/461 (14%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL  +     +  +   +      +         A    +     +  + L
Sbjct: 66  KLLKKAGELGLLSADVPEEYGGLALDKVSSALISEKLAKVGGFAISHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K + PK+ + E+                  LTE   G+D  +  +  +    G
Sbjct: 126 FGNEEQKKKYLPKLATGEW-------------LAAYALTEPSSGSDARSAKTVARLNEAG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F + AQV+G          + + +  G+     + K+G +
Sbjct: 173 THYILNGEKQWITNAGFADVFTVYAQVDGDK----FTAFIVERTFPGVSTGAEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +    +   L  +  G      IL        + +V   +  L  A+ YA
Sbjct: 229 SSSTRTLILEDVPVPVENVLGEIGKGHKIAFNILNIGRYKLGVGAVGSSKHVLEIALKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
             R      +    + K     +A  + AA +  +R    FDE             ++ +
Sbjct: 289 NGRQQFKTPISQFNLTKEKFGTMASKLYAAESSVYRTVGLFDERMSHFTPEEEKDGRAVA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A   I   + K++  ++   V+ EA++  GG G+++E  ++R YR+S  N I  G+ 
Sbjct: 349 NAIAEYAIECSLNKFFASEVLDYVVDEAVQIHGGYGFMDEYEVSRAYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L LL+K  +L E+L   + + +G +               +
Sbjct: 409 EINRLIVPGTYVKKAFSGELPLLQKAQSLQEELMMMMPEQVGDAP-------------LE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAG---------MNDIAD 527
           ++K L R + +KIAL  +  AL   G         + ++AD
Sbjct: 456 QEKYLVRNM-KKIALLVAGTALQTYGKKFENEQELLANVAD 495


>gi|196250644|ref|ZP_03149333.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196209863|gb|EDY04633.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 399

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 133/381 (34%), Gaps = 43/381 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   GE +D+  F        +R     L        +  +     +   A    
Sbjct: 27  PYIKEWDERGE-FDRNIF--------KRLAELNLMGVCIPEQYGGMGMD--YNSLAIVCE 75

Query: 142 LMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  +     
Sbjct: 76  ELERGDTAFRTAVSVHTGLNSLTLLQWGTEEQKQKYLI-------------PQARGEKIG 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             GLTE   G+D+A+I +   +  D         W   + ++D F++ A  +       +
Sbjct: 123 AFGLTEPNAGSDVASIQTTAVRDGDDYILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + + +  G   + +K K+G RS  T EL F N         N+     E  KI +  
Sbjct: 183 SAFIVERTMPGFSSRPIKGKLGIRSGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSA 239

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+   +V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L
Sbjct: 240 LDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQISRLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E  + R
Sbjct: 300 VYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNEYPVER 352

Query: 433 HYRESPANSILLGSGNAMVLD 453
           + R S A  I  G+     + 
Sbjct: 353 YLRNSKAPVIYEGTREIHTIM 373


>gi|150002926|ref|YP_001297670.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482]
 gi|254884707|ref|ZP_05257417.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294775842|ref|ZP_06741342.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|319642377|ref|ZP_07997031.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A]
 gi|149931350|gb|ABR38048.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482]
 gi|254837500|gb|EET17809.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294450302|gb|EFG18802.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|317385992|gb|EFV66917.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A]
          Length = 568

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +     ++  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDGRGLSMFIYDKNEGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +ID P +   ++ +   + A  AL ++ +   D          E
Sbjct: 309 NEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P++K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL-FSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +     +E +  S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATLRNYEAIPCSEDMQPLMDRVKEMANKFDA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE +       +AR L E  A+   +  L +  
Sbjct: 489 CTNAVKEAQNQELLDFVARRLYEMAAVCIMSHLLIQDA 526


>gi|169826132|ref|YP_001696290.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus
           C3-41]
 gi|168990620|gb|ACA38160.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus
           C3-41]
          Length = 594

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/459 (19%), Positives = 174/459 (37%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H   H   LL+ +   GL  +     +E +   +      A    +A   +   
Sbjct: 53  VENLEHHEFEHSVRLLKSAGELGLLGADVPEEYEGLGLDKVSSALIAEKMSVAGGFSITH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L       K + PK+ S E             +     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGDENQKKKYLPKLASGE-------------LIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +    G  Y L+G K W  ++  +D F++ A+++G          + + + NG
Sbjct: 160 LGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDK----FSAFIVERTFNG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G +S++T  L   +    +   L  +  G V    IL        + ++ 
Sbjct: 216 VSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGEIGRGHVIAFNILNIGRYKLGVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           G + +   A+ Y  +R      L D  + K  ++ +A  + A+ +L++R    F+     
Sbjct: 276 GSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASHLYASESLNYRTVGLFEDRLSQ 335

Query: 382 -------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  E K  +   A   I   I K +  +    +  EA++  GG G++ E  + R Y
Sbjct: 336 LSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAEYEVERIY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     + V            L LL+   NL ++L   + +D+G+    
Sbjct: 396 RDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPEDIGTEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                        ++K L +   +KIA+ ++  A  R G
Sbjct: 454 -----------LAQEKYLVKN-AKKIAVLAAGLAAQRFG 480


>gi|78059987|ref|YP_366562.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964537|gb|ABB05918.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 596

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 187/498 (37%), Gaps = 62/498 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFCGE---VLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPSEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     +  G  + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCK 495
           + GK          +  +
Sbjct: 475 ALGKLDSAAAASVKAQLE 492


>gi|332264032|ref|XP_003281052.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Nomascus
           leucogenys]
          Length = 415

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  +K      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVKGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 285 LGAAHASVVLTRDHLNVRKQFGEPLASNQYLQFKLADMATRLVAARLMIRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRILISRSLLQ 414


>gi|78045829|ref|YP_362004.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78034259|emb|CAJ21904.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 387

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 137/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
           H   P     D     PA   L R     GL     + ++        AH +    +   
Sbjct: 27  HHIAPLAAAADHYNVFPA--QLWRLLGEQGLLGLTVEDAYGGSGMGYLAHVVAMEEISRA 84

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                    + S    + +    +    + + PK+ S E+                L ++
Sbjct: 85  GGAIGLSYGAHSNLCLNQLRKNASHEQKQRYLPKLCSGEH-------------VGALAMS 131

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  +     D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 132 EAGSGSDVVSMKLRADARGDRFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIV 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           +    G    +  +K+G R + T EL F++        L    G V  +   +  +  ++
Sbjct: 192 EKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLDFERVVL 251

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   +  M  ++   + Y   R   G  +    +M+  +AD+ + + A  A  + +A + 
Sbjct: 252 AGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLMQAKLADMYVGLNACRAYVYAVARAC 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  ++AA A         +  + A  +  +A++ +GG+GYI E    R +R++   
Sbjct: 312 DAGRTTRQDAAGA-------ILYAAEKATWLTGQAIQVLGGNGYINEYPTGRLWRDAKLY 364

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 365 EIGAGTSEIRRMLIGREL 382


>gi|71065524|ref|YP_264251.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038509|gb|AAZ18817.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 594

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/489 (16%), Positives = 172/489 (35%), Gaps = 62/489 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHP-AWHALLR 108
           + L  +    +    +E+A++       L      G+        D V   P  +    +
Sbjct: 29  ENLAHVDMETVDMILEEMAKLTKN---VLLPINRSGDEEGATFQGDGVVTTPTGFKEAYK 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +    G      +  +      +   +    +   A        + +V +   +    + 
Sbjct: 86  QYAESGWVGLSGNAEYGGQGFPKMVTMLTEEMVFTANQSFALYPNLTVGATLCLNAAASE 145

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +  K+++ E+  T             + LTE   GTD+  I ++     DG Y +
Sbjct: 146 EQKQTYLEKMYNGEWAGT-------------MCLTEPHAGTDLGIIKTKAIPNDDGSYDI 192

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    D       ++LA+          +  F+VP+ L +     G  N L  
Sbjct: 193 SGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNEDGSLGERNTLAV 252

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G +++AT  + F +  G+++G  N     +  M     +   +  + G  ++ 
Sbjct: 253 GSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTMGLQGLGGSELAY 312

Query: 333 AEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             A  YA  R   G               +I    ++R + +   +  A+   +  +A +
Sbjct: 313 QNAALYANDRGQ-GRSDTQVQSPEKPADAIIHHADVRRMLLNAKANTEASRCFAMYVAKN 371

Query: 380 FDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D  K  ++  A          + P+ K +    A     +  +  GG GYI E  + + 
Sbjct: 372 LDAEKFSTDPEAAQAATARVALLTPVAKAFLTDKALEATVDCQQVFGGHGYIREWGMEQI 431

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++    I  G+     LD+L   +              + +D  S+ +   +I + ++
Sbjct: 432 VRDTRIAQIYEGTNGIQALDLLGRKVARNNGKYVTHFLGEI-RDFVSNMQADHSIKQATL 490

Query: 492 SLCKEDKGL 500
           +     + L
Sbjct: 491 NAADTIEAL 499


>gi|323137065|ref|ZP_08072145.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397826|gb|EFY00348.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 389

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 140/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   R D     P  + L  +    GL     +  +    +    H +    +   +   
Sbjct: 33  PRAARIDAENSFP--NDLWPKMGALGLLGVTVNEDYGGANLGYLEHVVVMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + P++ S E+                L ++E   
Sbjct: 91  GLSYGAHSNLCVNQIHRNGSDEQKRGYLPRLVSGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + ++  D         W  + P +D  I+  + +   G   +   + + + 
Sbjct: 138 GSDVTNMRLRARRSGDEYILDGSKMWVTNGPDADIIIVYGKTDPSAGAHGITAFIVERAF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G+      +K+G R + T EL F          L      V  +   +  + AI++   
Sbjct: 198 KGVSASPKFDKLGMRGSNTCELIFDECVVPAENVLGRPERGVNVLMSGLDYERAILAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  MR  L   + Y   R   G  + +  +M+  +AD+   ++A+ A  + +A + D  +
Sbjct: 258 LGIMRACLDIVLPYVHERKQFGQPIGEFEIMQGKLADMYTALSASRAYIYAVAKACDRGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A + A        + A  +  EA++C+GG+GY  E    R  R++    I  
Sbjct: 318 TTRKDAAAAILFAA-------EKATWMALEAIQCLGGNGYTNEYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L + T 
Sbjct: 371 GTSEIRRMLIGRELFQETA 389


>gi|114762746|ref|ZP_01442180.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114544656|gb|EAU47662.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 384

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 124/354 (35%), Gaps = 28/354 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL        +  +      + R       A L    L+  +V   S  + +  TP  
Sbjct: 44  EMGLFGLSTPEEYGGIGLSVPQEARLIETLCYASLTFRSLIGTNVGIGSQGIVMDGTPEQ 103

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P + S               V     LTE   G+D   I +  ++          
Sbjct: 104 KEQWLPGVASG-------------DVVASFALTEPDNGSDAGGIRTSAKRDGGDFVINGT 150

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++  +  F + A+ +    G   V   +      G+   +   K+G +   T ++
Sbjct: 151 KRYITNAVRAGVFTVFARTDADKPGADGVSAFIVPADTPGITVAKPDRKLGQKGTKTSDV 210

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRH 343
            F N        +       +  +  +  LD   + V  M V      L  A  YA  R 
Sbjct: 211 IFENVRVPESAIIGGPKNLHKGFRTAMKVLDRGRIHVGAMAVGQSQRMLDIATDYALERK 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +  +++  IAD   ++ AA AL    A++FD           A I A  TKY+
Sbjct: 271 QFGKPIGEHQLVQGLIADCQAELHAARALVRASADTFDRE-------GKAIIEASCTKYF 323

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           C + A  +   A++  GG+GY+ E  I R YR+     I  G+     L +   
Sbjct: 324 CTEAAGRIADRALQIHGGAGYMAEYDIERLYRDIRLLRIYEGTSQIQQLVIARR 377


>gi|116048661|ref|YP_792539.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583882|gb|ABJ09897.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 387

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/388 (19%), Positives = 140/388 (36%), Gaps = 25/388 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD+    P    +LR +   G            +   +             
Sbjct: 22  HELAPKAADWDRDHHFPV--EVLRAAAEQGYLGLYIAEEDGGLGLSRLSTSLIFEQLAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +     +S    +A M+A      + + W P +   E                   LTE
Sbjct: 80  CVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGE-------------SLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G   +   L  
Sbjct: 127 PDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCFLVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y R ++K+G R+  T  + F          +     G V  MK L    L+ A
Sbjct: 186 ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  +    A+  D
Sbjct: 246 SCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLGAHRLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A +   + K +       V  EA++  GG GY+ +  + R  R++  + 
Sbjct: 306 RGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           IL G+   M + V   L +   + ++L 
Sbjct: 360 ILEGTNEIMRVIVARRLLEQGGMLDRLL 387


>gi|163849111|ref|YP_001637155.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222527084|ref|YP_002571555.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163670400|gb|ABY36766.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450963|gb|ACM55229.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 382

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 132/370 (35%), Gaps = 32/370 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P+      +    GL    +   +            A           
Sbjct: 26  PKARYVDEHSAFPS--ETFAKMAQLGLMGLPFPEEYGGAGADSVSTAIAIEEVARCCGST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +   S  +A+  T    + +               P  K       GLTE   
Sbjct: 84  ALAYAAHLGLGSAPIAMFGTEEQKRRFL-------------VPAAKGEYLAAFGLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  + + D         W  ++P++   I+ A  +  +G   +   +     
Sbjct: 131 GSDAGATRTTARLVGDEWVINGQKMWITNAPIAGHIIVTAVTDPDLGKKGISAFIVPRGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVS 326
            GL + + + K+G R + +  +   +        L     G ++ +++   LD   + + 
Sbjct: 191 PGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQV---LDGGRIGIG 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + L       A+ YAR R   G  +     +   IA++A+D+AAA AL +  A   D
Sbjct: 248 AMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVYGAARLKD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  + EAA       I K +  + +  +  +A++  GG GY +E  + R YR++   +
Sbjct: 308 AGRPYTREAA-------IAKLFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLT 360

Query: 442 ILLGSGNAMV 451
           I  G+   + 
Sbjct: 361 IGEGTSEILR 370


>gi|313680955|ref|YP_004058694.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313153670|gb|ADR37521.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 389

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 150/391 (38%), Gaps = 38/391 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           + +   P        G         P  H L+R     G+       ++  +        
Sbjct: 23  LTDRVVPTAAERDASGA-------FP--HDLVRELGELGVFGLQVPEAYGGLGLPTRTAA 73

Query: 136 RAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           R       A    G  + S +  +   + L  +    + + PK+ S E+           
Sbjct: 74  RILEEIAWADGSLGLTVASHNSLATGHLLLDASEEQKERYLPKMASGEW----------- 122

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG-- 251
                 GLTE   G+D AA++++ +  +DG + L+G K F++   ++  +++ A+ +   
Sbjct: 123 --LGAWGLTEPGAGSDAAALSTRAE-EADGGWVLNGTKQFITQGSVAGVYVINARTDPAP 179

Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
                  +   +      GL   R ++K+G RS+ T +L F +       L+G+      
Sbjct: 180 EGKPHRGISTFVFPAGTPGLTIGRKEDKLGLRSSDTAQLIFEDLRLPADALVGERGRGFY 239

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            V  +     +  A +SV   R +L  A  YA  R   G  +     +   +A ++ D+ 
Sbjct: 240 TVLRVLDGGRVGIAALSVGLGRAALEFAARYAGERRQFGRPIGRFEGVGFQLAQMSTDLE 299

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L  + A   D  +  +  AA A       K +  ++A      A++ +GG GYI++
Sbjct: 300 AARMLYLKAAELKDAGRDYTLAAAQA-------KLFASEVATRAADAAIQILGGYGYIKD 352

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R++R+     I  G+   + L +   +
Sbjct: 353 YPVERYWRDVRLMRIGEGTSEILKLVIAKRV 383


>gi|13476417|ref|NP_107987.1| isovaleryl-CoA-dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14027178|dbj|BAB54132.1| isovaleryl-CoA-dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 387

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 135/368 (36%), Gaps = 26/368 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    PA   L R     GL     D  F        AH I    +   +
Sbjct: 28  RIAPIAGDIDRQNEFPAH--LWRELGALGLLGITADPDFGGSGMGYLAHVIAVEEISRAS 85

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    TP   + + P + S E                 L ++E
Sbjct: 86  ASVGLSYGAHSNLCVNQINRWATPAQKEKFLPPLCSGE-------------RVGALAMSE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K +D         W  + P +D  ++ A+ +       +   + +
Sbjct: 133 SGAGSDVVSLKLRAEKRNDRYVLNGTKMWITNGPDADTLVVYAKTDPERKSRGITAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +  G    +  +K+G R ++T EL F N        L+     VE +   +  +  +++
Sbjct: 193 KAMTGFSVAQKLDKLGMRGSSTGELVFENVEVPFDNVLHEEGRGVEVLMSGLDYERTVLA 252

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M   L  AI Y   R   G  + +  +++  +AD+   + AA A  + +A   D
Sbjct: 253 GGPIGLMAACLDVAIPYVHERKQFGQPIGEFQLVQGKLADMYTVMNAARAYVYAVAAGCD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  + A  +  +A++ +GG+GYI +    R  R++    
Sbjct: 313 RGQTTRKDAAG-------CVLFAAEKATQMALDAIQLLGGNGYINDYPTGRLLRDAKLYE 365

Query: 442 ILLGSGNA 449
           I  G+   
Sbjct: 366 IGAGTSEI 373


>gi|239612853|gb|EEQ89840.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327352018|gb|EGE80875.1| short-chain specific acyl-CoA dehydrogenase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 438

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 134/384 (34%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 77  EQIGPKVREMDEAETMD--PAIVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVGIEELARV 134

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +     T  +   L        + W PK+               T+      L+
Sbjct: 135 DPSVSVMCDVHNTLVNTAVLKFADAEGKRKWLPKL--------------ATNTVGSFCLS 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 181 EPVSGSDAFALQTKAVKTESGYKINGSKMWITNSMEAGFFIVFANIDLSKGYKGITAFIV 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+   
Sbjct: 241 EKGTPGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGEEGQGYKYAINLLNEGR 297

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  +A    +IAAA AL +  
Sbjct: 298 IGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVYNA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 358 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRD 410

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  +L+K
Sbjct: 411 SKIGAIYEGTSNIQLQTIAKMLQK 434


>gi|90417874|ref|ZP_01225786.1| isovaleryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337546|gb|EAS51197.1| isovaleryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 382

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 67/404 (16%), Positives = 138/404 (34%), Gaps = 28/404 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L    + L  M            P     D+    P  + L       GL     +  
Sbjct: 3   FALGEEIEALRDMVRRFA--QERIAPRASEIDRTNEFP--NELWTELGALGLLGVTVEEE 58

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +        AH +    +   +        + S    + +    T      + PK+ S E
Sbjct: 59  YGGSAMGYLAHCVAIEEISRASASVGLSYGAHSNLCVNQIRRNGTAEQKAKYLPKLVSGE 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+  +  +  K +          W  + P +  
Sbjct: 119 H-------------VGSLAMSESGAGSDVVGMKLRADKRNHRFVLNGTKMWITNGPDAST 165

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            I+ A+ +   G   +   L +    G    +  +K+G R + T EL F +        L
Sbjct: 166 LIVYAKTDPDAGPRGITAFLIEKDMAGFSTAQKLDKLGMRGSNTCELVFQDCEVPYENIL 225

Query: 303 NVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               G  + +   +  +  ++S   +  M   L   + Y   R   G  + +  +M+  +
Sbjct: 226 GEEGGGAKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYVHEREQFGQPIGEFQLMQGKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + + A  A  + +A + D  ++  ++AA           +  + A  +  EA++ +
Sbjct: 286 ADMYVTMNACRAYVYAVAAACDRGETSRKDAAG-------CILYAAEKATQMALEAIQAL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GG+GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 339 GGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFRETA 382


>gi|109484416|ref|XP_001053896.1| PREDICTED: Isobutyryl-CoA dehydrogenase, mitochondrial-like [Rattus
           norvegicus]
          Length = 411

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 58  PNMAEWDQKELFPV--DVMRKAAQLGFGGIYVRTDVGGSGLSRLDTSVIFEALATGCTST 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 116 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 163 SDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRT-GGSGPKGISCIVVEKGT 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 221 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 281 LGAAHASVVLTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 336

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +    +  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 337 --QEEREDAVALCSMAKLFVTEECFTICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 394

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 395 GSNEVMRMLISRSLLQ 410


>gi|289661727|ref|ZP_06483308.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 597

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/527 (17%), Positives = 182/527 (34%), Gaps = 69/527 (13%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
                     D L   AL A                ++    +E  R  +     L++  
Sbjct: 7   PLTDFRFALHDVLGAQALFARLGYADAST------DIIDAVLEEAGRFTSQVLAPLNSVG 60

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G  +DK    V   P + A   + +  G +    +  F          +  + +   
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G+    S  +   +           +   +    +  T             + LT
Sbjct: 121 ANLAWGNFPLLSHGAMEALRQHGEAWQQDVFLKPLIDGRWTGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         
Sbjct: 168 EPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G  +    
Sbjct: 228 ISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQ 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L   +  +     +   A+ Y+R R  S               +I  P +
Sbjct: 288 AMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I      +  L+   A+  D A        R++       + PI+K    + + 
Sbjct: 348 RRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPISKACQTEWSI 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQ 467
                A++C GG GYI E  + +  R++   +I  G+     LD++      +     + 
Sbjct: 408 ENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKL 467

Query: 468 LFSTLE-----QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             + +E     QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 468 FLADVETFAKAQDGNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|262370610|ref|ZP_06063935.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314410|gb|EEY95452.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 607

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 85/457 (18%), Positives = 172/457 (37%), Gaps = 55/457 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V+    +     + +  G     +   F      Q+  +  + +   A          S
Sbjct: 72  EVKTPKGFKDAYDQFVQGGWQGLSFPEEFGGQNLPQSLNLIKSEMMGTANWSFQMYPGLS 131

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           +   + +    T      + P + +  +  T             + LTE + GTD+  + 
Sbjct: 132 IGCMNTILQFGTDEQKNLYMPNLVAGTWSGT-------------MCLTEPQCGTDLGQVK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           ++ +  +DG Y +SG K F+S+   D       I+LA++         +  F+VP+ L +
Sbjct: 179 TKAELNADGTYNISGTKIFISAGEQDLTENIIHIVLARLPDAPTGTKGISLFIVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G R++AT  L F N  G+L+G+ N     +        + 
Sbjct: 239 ADSSLGERNPVTCGSIEHKMGIRASATAVLNFDNAVGYLIGEPNKGLHAMFTFMNTARIG 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALDIA 367
           +AI  ++   +S   A+ YA+ R     +SG          +I    ++R +        
Sbjct: 299 TAIQGIAHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHADVRRMLLTQKAIAE 358

Query: 368 AATALSFRLANSFD---EAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMEC 418
              ++ +  A   D   +A  R + AA+           PI K +  ++        M+ 
Sbjct: 359 GGRSMIYYAAQIADKMADALERGDTAAFEAHDDHLGFYTPILKGFLTELGLEAANHGMQV 418

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQD 475
            GG GYI+E  + +  R++   ++  G+     LD++    LL     +     + + + 
Sbjct: 419 YGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLIGRKVLLTSKGKVIRDYTTEILKF 478

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
            G   +     +R       +       LT +I LA+
Sbjct: 479 CGQQARN--KYMRRFAWDLTKVCAQWNALTVRIMLAA 513


>gi|302499832|ref|XP_003011911.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371]
 gi|291175465|gb|EFE31271.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371]
          Length = 372

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 11  EEIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 68

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 69  DPSVSVMVDVHNTLVNTAVLKYGSAAIKKRWLPRL--------------ATDTVGSFCLS 114

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 115 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFVV 174

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 175 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 231

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    +IAAA AL F  
Sbjct: 232 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNA 291

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 292 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRD 344

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 345 SKIGAIYEGTSNIQLQTIAKSLQK 368


>gi|261189941|ref|XP_002621381.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239591617|gb|EEQ74198.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 438

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 134/384 (34%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 77  EQIGPKVREMDEAETMD--PAIVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVGIEELARV 134

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +     T  +   L        + W PK+               T+      L+
Sbjct: 135 DPSVSVMCDVHNTLVNTAVLKFADAEGKRKWLPKL--------------ATNTVGSFCLS 180

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 181 EPVSGSDAFALQTKAVKTESGYKINGSKMWITNSMEAGFFIVFANIDLSKGYKGITAFIV 240

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +     +   N+     +  K  I  L+   
Sbjct: 241 EKGTPGFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGEEGQGYKYAINLLNEGR 297

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++ +   M+  +A    +IAAA AL +  
Sbjct: 298 IGIAAQMTGLALGAWENAANYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALVYNA 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 358 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRD 410

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +  +L+K
Sbjct: 411 SKIGAIYEGTSNIQLQTIAKMLQK 434


>gi|134292055|ref|YP_001115791.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135212|gb|ABO56326.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 377

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 133/395 (33%), Gaps = 29/395 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A           P   +WD     P    ++ +    GL   I  +      
Sbjct: 7   EDQRMIRDAARAFAT-EVLAPNAAQWDHDARLPD--TVVAQLGELGLLGMIVPQELGGAY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             +MS   +      L   TP     W  +          
Sbjct: 64  TDYVAYALAMEEIAAGDAACATMMSVHNSVGCGPILGFGTPAQKDRWLAE---------- 113

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
              M    V     LTE   G++   + ++ +   DG + L+G K F+++   +   I+ 
Sbjct: 114 ---MAAGRVIGAFCLTEPHAGSEAHNLRTRAELH-DGQWVLNGAKQFVTNGQRAGVAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVS 305
           A  +   G   +   L      G    + + K+G R++ T  +   N        L N  
Sbjct: 170 AMTDPDAGKRGISAFLVPTDTPGFIVGKPEKKMGIRASDTCPITLENCTLPADALLGNRG 229

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    +  L    +  A  ++   R +  +A  YA  R   G  + +   +++ +AD+A
Sbjct: 230 EGLKIALSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L    A           E       A   K +  +MA  V ++A++  GG G
Sbjct: 290 TQINAARLLVHHAAKLRTAGLPCLSE-------ASQAKLFASEMAERVCSDAIQIHGGYG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + RHYR++    I  G+     + +   L
Sbjct: 343 YLADYEVERHYRDARITQIYEGTSEVQRMVIARQL 377


>gi|197104024|ref|YP_002129401.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196477444|gb|ACG76972.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 582

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/551 (18%), Positives = 194/551 (35%), Gaps = 59/551 (10%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHAL 106
             ++V +    L E  +    +     A+     L+      G R++  KV   P + A 
Sbjct: 19  HSALVERAFPDLDEDTVQAVLEAAGAFADNELAPLNRRGDLEGARYENGKVTAAPGFAAA 78

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +     G +    D  F      +A ++    +   A +        +  +   + L  
Sbjct: 79  YKAFAEQGWNSLTADPLFGGQGLPKAMELAVFEMAHAANMAFALCPMLTQAAIEALTLHG 138

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T R  +   PK+ S E+                + LTE + G+D+AA+T++ +   +G Y
Sbjct: 139 TERQKRLVLPKLVSGEW-------------TGAMVLTEPQAGSDLAALTTRAEPDGEGGY 185

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV-EGRVGCFLVPRLLED----------GSPNGL 270
            L G K F++    DA      ++LA+  +   G   +   L            GS N  
Sbjct: 186 RLHGQKIFITWGDHDATDNIIHLVLARTPDAPPGVKGISLFLTSKYELKDDGSLGSRNDF 245

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G  ++ T  + +      L+G+L      +  M     +   +  V     
Sbjct: 246 RPGSIEHKLGIHASPTCVMLYEGAKAELVGELGQGLAHMFVMMNAARVQVGVQGVGIAER 305

Query: 331 SLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSF------RL 376
           +  +A+ +A+ R              + D P ++R +  +   I AA  +         L
Sbjct: 306 AFQQALAFAQERRQGRAVWSADYPAAIYDHPDVRRTLMLMKAKIEAARGICLTTGVLADL 365

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+  ++   R+   A   ++ PI K W   +   V +  ++  GG G+IEE   A+HYR+
Sbjct: 366 AHRAEDEDERAAAKARQELLTPIAKAWSTDVGVEVASAGVQIHGGMGFIEETGAAQHYRD 425

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDSI 491
           +    I  G+       L    +   G      L + +    Q L  S        R + 
Sbjct: 426 ARIAPIYEGTNGIQAADLVGRKVRMNGGETMRGLCAEMMLSAQALADSPGLAPVGRRLAE 485

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-------DNCHSTHCM 544
            +   ++     L      A +A+  Y     D+   ++  R         +        
Sbjct: 486 GVAALERATDWLLGADNGAALAASVPYLKLAGDVVGGWILGRLAIAADGSDEPWLQAKGA 545

Query: 545 LHGRFNAAHII 555
           L  R  AA ++
Sbjct: 546 L-ARLYAAQVL 555


>gi|126740626|ref|ZP_01756313.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126718427|gb|EBA15142.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 385

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 133/377 (35%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P  ERW K            ++   G+ C+     +  +     H+   A   +  A   
Sbjct: 30  PHEERWQKQGHID--RDFWNKAGEIGILCASVPEEYGGMGGDFRHEAVIATEQFRAAGFS 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +    K W PK+ + E                 + +TE   
Sbjct: 88  GFGNSVHSQICAGYILDYGSEEQKKRWLPKMATGEM-------------VCAIAMTEPGT 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED-G 265
           G+D+  I +  +   +  Y L+G K F+++   +   I++A+ +   G   V  ++ +  
Sbjct: 135 GSDLQNIKTTARLEGNE-YVLNGSKTFITNGQQAGLIIVVAKTDPSQGAKGVSLMMVETA 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSA 321
              G    R   K+G +S  T EL F N        L      G  + MK L    L  A
Sbjct: 194 EAEGFARGRNLEKLGLKSQDTSELFFDNVRLPPENLLGGVEGQGFYQLMKSLPQERLVVA 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +   + M  +L E + Y   R   G  L++    +  +A++      A           D
Sbjct: 254 LGGAAAMNKALEETVAYTSERRAFGKPLLEMQNTRFKLAEVKTIAHIARVF-------LD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  ++          A + K+W  +M    I E ++  GG GY+ E  IA  Y ++    
Sbjct: 307 DCVAKHLRGELDATTASMAKWWVTQMQCETIDECLQLFGGYGYMSEYPIANMYADARVQK 366

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M   +   L
Sbjct: 367 IYGGSNEIMKELIARSL 383


>gi|187926711|ref|YP_001893056.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665043|ref|YP_002983402.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187728465|gb|ACD29629.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867070|gb|ACS64730.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 385

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 131/355 (36%), Gaps = 26/355 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHK 172
           GL           +    A +                +   +V   S  + +  T     
Sbjct: 48  GLFGLSIPEEHGGIGLSMAQECEVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGTDAQKA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           D+ P+I S E             + I   LTE   G+D A++ ++     D        +
Sbjct: 108 DYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATLDGDHYVINGTKR 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++   
Sbjct: 155 YITNAPRAGAFTLMARTGGE-GASGISAFIVPADTPGITLGKPDKKMGQRGTKTCDVMLD 213

Query: 293 NTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
           N        +      G    MK+   LD   + +S +   +A      A+ YA+ R   
Sbjct: 214 NVRVPAANIIGGVAGQGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYAKERKQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D  +++  +AD   ++ A  ++    A  +D AK   ++     ++A  TK +C 
Sbjct: 271 GQPIADFQLIQAMLADSQAELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASCTKMFCT 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +M   V   A++  GG+GYI E    R YR+     +  G+     L +   L +
Sbjct: 330 EMVGRVADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQLIIAKNLLR 384


>gi|156740601|ref|YP_001430730.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231929|gb|ABU56712.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 379

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 155/407 (38%), Gaps = 38/407 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS    E+ R       +  A      R + +EF      L+++    GL       
Sbjct: 2   DFALSEQH-EMLRQTVRAFAEQEARPTAAARDEAMEFP---VDLVKKMGQLGLMGVAVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIF 179
            +        +   A  +  +++++A   +  SV ++ +   +    T    ++      
Sbjct: 58  QYGGAGLD--YVSYAIVIEELSRVDASLGVIASVNNSLVCYGIETFGTEDQKRELL---- 111

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                     P+ +  +     L+E   G+D AA  +   +  D         W  +   
Sbjct: 112 ---------TPLAEGRMLGAFSLSEPGAGSDAAAQKTTAARDGDYYVINGIKNWVTNGDY 162

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  I++A  +   G   +   L D    G    ++++K+G RS  + ++ + N   + L
Sbjct: 163 ADTIILMAMTDPGKGHRGITAFLVDPREPGCSIVKVEHKLGIRSAHSCQMAYDN---YRL 219

Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
                     +  KI +  L++  + ++   V +A+     A+ YA+ R   G  +I+  
Sbjct: 220 PAWRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A  I AA  L++  A   D+       A+ A       K +  + A     
Sbjct: 280 AIGFTLADMATRIKAARLLTYEAAWRKDQHLDFVSAASMA-------KLYASETAMWTAT 332

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++  G +GY +E  + R++R++    I  G+     L +   + +
Sbjct: 333 KAVQVFGSNGYSKEYPVERYFRDAKITEIYEGTSEIQRLVIAREIAR 379


>gi|89098398|ref|ZP_01171282.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89086947|gb|EAR66064.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 383

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 132/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W++    P      R+    G  C   D  +          +             
Sbjct: 29  PFYGQWEQERLIP--RDFWRKMGEQGFLCPDLDEVYGGSGTDWGFSVIINEELERVGSGL 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  +   ++   + +    W PK  S               +   + +TE   G
Sbjct: 87  VGFGLHNDIAVPYLSEFGSEKQKNRWLPKCASG-------------DIITAIAMTEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRV--GCFLVPRLLEDG 265
           +D+A I++      D  Y L G K F+++ M    +++A + + +       +  L  + 
Sbjct: 134 SDLAGISTTAVDEGD-YYLLHGQKTFITNGMHADLVIVACKTDPQAVPKHKGISLLAVER 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +KIG  S  T EL F +       L+G+       +        L  AI
Sbjct: 193 GCKGFSRGRKLDKIGLHSQDTAELIFEDCLVPKENLIGEEGQGFQYMMKKLQQERLVVAI 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V L   + Y + R   G  + +    +  +A++A DI    +    L     E
Sbjct: 253 AAQAASEVMLELTLSYVKSREAFGRPVGNFQNTQFKMAEMATDIEMGRSFLDTLNKEHVE 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K  +++ + A+             A  + AE ++  GG GY+EE  IAR YR+ P  SI
Sbjct: 313 GKDITQKVSMAKW-------KLTDNARRIAAECLQLHGGYGYMEEYEIARRYRDIPVASI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 366 YAGTNEIMKSIIAKGL 381


>gi|297194257|ref|ZP_06911655.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720549|gb|EDY64457.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 386

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 85/408 (20%), Positives = 154/408 (37%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 4   DHRLSAEHEELRRTVEQF-----AHDVIAPKIGDFYERHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    + W P++ S
Sbjct: 59  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPIHLFGTEEQKRQWLPRLCS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             +    GLTE  GG+D     +   +  D  + ++G K F+++  +
Sbjct: 119 GE-------------LLGAFGLTEPDGGSDAGGTRTTAVRDGDE-WVINGSKCFITNSGT 164

Query: 241 D--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D    + +  V GR   G   +  ++      G       +K+G  ++ T EL F++   
Sbjct: 165 DITGLVTVTAVTGRKEDGRPEISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADVRV 224

Query: 297 FLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
            +   L     G  + ++I   LD   +++S +   LA     E++ YAR RH  G  + 
Sbjct: 225 PVANLLGQEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYARERHAFGRPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  IAD+ +    A       A+     +   +EAA       + K +   +A  
Sbjct: 282 SNQAIQFKIADMEMKAHMARVGWRDAASRLVHGEPFKKEAA-------VAKLYSSTVAVD 334

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 335 NAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|15595943|ref|NP_249437.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218893310|ref|YP_002442179.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|296390906|ref|ZP_06880381.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313105566|ref|ZP_07791832.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946632|gb|AAG04135.1|AE004509_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|218773538|emb|CAW29351.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310878334|gb|EFQ36928.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 387

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 140/388 (36%), Gaps = 25/388 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD+    P    ++R +   G            +   +             
Sbjct: 22  HELAPKAADWDRDHHFPV--EVIRAAAEQGYLGLYIAEEDGGLGLSRLSTSLIFEQLAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +     +S    +A M+A      + + W P +   E                   LTE
Sbjct: 80  CVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGE-------------SLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G   +   L  
Sbjct: 127 PDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCFLVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y R ++K+G R+  T  + F          +     G V  MK L    L+ A
Sbjct: 186 ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  +    A+  D
Sbjct: 246 SCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLGAHRLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A +   + K +       V  EA++  GG GY+ +  + R  R++  + 
Sbjct: 306 RGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           IL G+   M + V   L +   + ++L 
Sbjct: 360 ILEGTNEIMRVIVARRLLEQGGMLDRLL 387


>gi|260554589|ref|ZP_05826810.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260411131|gb|EEX04428.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 288

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 61/295 (20%), Positives = 113/295 (38%), Gaps = 23/295 (7%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             + +  + + PK  S E+                  LTE   G+D +AI  + ++  D 
Sbjct: 9   YGSEQQKQAYLPKFASGEW-------------LGCFCLTEPHVGSDASAILCKAERDGDH 55

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  ++  S   +   ++ A  + + G   +   L   +  G    R+++K+G  ++
Sbjct: 56  WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISCFLVPTNTPGYLVTRIEDKMGQHAS 115

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
            T  +   +    L   +     G    +  L    +  A  SV   R +   A+ YA  
Sbjct: 116 DTATITLEDCRIPLENLVGQEGEGYKIALSNLAAGRIGIAAQSVGMARAAFDAAVQYANE 175

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L+    +   +AD+A  I AA  L+   A   D      +EA+ A       K
Sbjct: 176 RKAFGVELVQHQAVGFRLADMATQIEAAHQLALHAATLKDAGLPCLKEASMA-------K 228

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +   MA  V ++A++  GG GY+ +  + R YR+   + I  G+ +   L +  
Sbjct: 229 LFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQRLVIAR 283


>gi|229007334|ref|ZP_04164933.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228753939|gb|EEM03378.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
          Length = 600

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 84/439 (19%), Positives = 161/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKISSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKQYLPPLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FTAFIVEKEYPGVSTSPEEKKMGIKCSSTRTLILEDALVPKENVLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + +L  +  YA +R      +   P+++  +A++A  I AA + 
Sbjct: 268 LNIGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++   V+ E ++  G
Sbjct: 328 VYRTVGLFESHMSTLTEEQVKDGKAVAASIAEYAIECSLNKVFGSEVLDYVVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|114569089|ref|YP_755769.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339551|gb|ABI64831.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 596

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/450 (19%), Positives = 167/450 (37%), Gaps = 59/450 (13%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
                G     V+    W    ++    G      D  +        H +  A   +++ 
Sbjct: 67  TRDADGN----VKTPTGWKDAFKQMSEGGWTALSSDPEYGGQGLP--HVLNLAFNEMVSS 120

Query: 146 LEAGHLMSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 M P +T  +  AL T         + PK+ S ++  T             + LT
Sbjct: 121 ANMAFGMYPGLTLGAAAALATGGTDEQKALYLPKMISCQWGGT-------------MNLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------R 252
           E   GTD+  + ++    +DG Y ++G K ++SS   D       ++LA++EG       
Sbjct: 168 EPHCGTDLGLLRTKAVPQADGSYKITGQKIWISSGEHDMAENIIHLVLARIEGAPEGVKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+VP+ + D     G+ N      L++K+G   NAT  +++    G+L+GD N    
Sbjct: 228 ISLFVVPKFIPDADGNPGTRNAAKCGGLEHKMGIHGNATCVMDYDEATGWLVGDENKGLK 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPV 354
            +  M     L   +   +    +  +++ +A+ R   G               +I  P 
Sbjct: 288 IMFIMMNEARLGVGLQGYALAEAAYQQSLGFAKDRLQ-GRSLTGPKNQDGPADPIIVHPD 346

Query: 355 MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R + D    + AA   +   A   D      +   R +   Y  ++ PI K +     
Sbjct: 347 VRRMLMDQKSFVEAARCFALWTALQGDLEEKASDPAMREKAGDYMALLTPIVKGYLTGKG 406

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466
             +++  ++  GGSG+ EE   ++  R++    I  G+     LD++   L   G     
Sbjct: 407 YDMVSSGLQIHGGSGFTEEWGASQLLRDARITLIYEGTNGIQALDLVGRKLAMNGMRPIT 466

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             F+ L+  +   G         +++  K 
Sbjct: 467 TFFAELDAFVAEGGNDETQPFVQAVADTKA 496


>gi|262376318|ref|ZP_06069548.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308919|gb|EEY90052.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 390

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 138/386 (35%), Gaps = 29/386 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLM 143
               P  ++ D+    PA   L ++    GL        +        AH I    +   
Sbjct: 27  KEITPIAQQVDRDNKFPAH--LWKKFGEMGLLGLTVSEEYGGSNFGYLAHIIAMQEISRA 84

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + PK+ S EY                L ++
Sbjct: 85  SASIGLSYGAHSNLCVNQIKRNGTEEQKQRYLPKLISGEY-------------VGALAMS 131

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  +   +D  ++ A+ + + G   +   L 
Sbjct: 132 EPNAGSDVVSMKLKAEDKGDHYLLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLV 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           + +  G  +    +K+G R + T  L F N         NV  G     K+L+  LD   
Sbjct: 192 EKNMPGFSHGTHLDKLGMRGSNTYPLFFDNVEVP---KENVMGGVGNGTKVLMSGLDYER 248

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             +S   + + +A       Y   R   G  L +  +M+  IAD+     A  AL + + 
Sbjct: 249 AVLSAGPLGIMDACMDTVIPYIHDRKQFGQALGEFQLMQGKIADMYSTWLACKALVYAVG 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+A    E +   R  A     +  + A  +  E ++ +GG+GYI E +  R +R++
Sbjct: 309 AECDKA----EHSRSLRKDAASAILYAAEKATWMAGETIQTLGGNGYINEFAAGRLWRDA 364

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
               I  G+     + +   L   T 
Sbjct: 365 KLYEIGAGTSEIRRMLIGRELFNETA 390


>gi|227819395|ref|YP_002823366.1| isovaleryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227338394|gb|ACP22613.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium fredii
           NGR234]
          Length = 387

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 143/402 (35%), Gaps = 34/402 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L      L         +     P  +  D+    PA   L R     GL     D +
Sbjct: 8   FALGEEIDALRDSVRRFASE--RIAPLADETDRSNAFPA--PLWREMGELGLLGITADET 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +        AH +    +   +        + S    + +           + PK+ S E
Sbjct: 64  YGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++  +  K  D         W  + P +D 
Sbjct: 124 H-------------VGALAMSEPGAGSDVVSMKLKADKRGDRYVLNGNKMWITNGPDADV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F++         
Sbjct: 171 LVVYAKTDPAAGPRGITAFLVEKTFPGFSTGQKLDKLGMRGSNTCELIFTDCKVP---QE 227

Query: 303 NVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV     E +++L+  LD   + +S      M   L   + Y   R   G  + +  +M+
Sbjct: 228 NVLGKVGEGVRVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + +  A A  + +A + D  ++  ++AA           +  + A  +  EA+
Sbjct: 288 GKLADMYVTMNTARAYVYAVAAACDRGETARKDAAG-------CILYAAEKATMMALEAI 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 341 QALGGNGYTNDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|225712474|gb|ACO12083.1| Isobutyryl-CoA dehydrogenase, mitochondrial precursor
           [Lepeophtheirus salmonis]
          Length = 413

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 129/372 (34%), Gaps = 27/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    +++R+   G         F      +              +  
Sbjct: 57  PNMTKWDQEHIFPV--DVMKRACGLGFGAIYASSEFGGTGLGRLDASIIFEALSEGCVTT 114

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS     A ++    +    + + P +                S+     LTE   G
Sbjct: 115 TAFMSIHNMVAWIIDTYGSKEQKEKYIPLLADM-------------SIIGSYCLTEPGSG 161

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D  +++++  +       L+G K F+S    SD ++++ +  G      +  +L +   
Sbjct: 162 SDATSLSTKAVRQG-HKLILNGSKAFISGAGTSDIYLVMCRT-GDNSPKGISCVLVEKGT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G  + + + K+G +S  T  + F +    +   +G          +      ++ A  S
Sbjct: 220 PGFSFGKNEIKMGWKSQPTRTITFEDCEVPVDNIIGKEGQGFSIAMNGLNGGRINIASCS 279

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     SL     + + R   G  L      +  IAD A  + A+  +    A++  +  
Sbjct: 280 LGATNASLNLVKEHLKVRKQFGKPLSQFQHNQFEIADCATKLVASRIMVRNAADALSQNH 339

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +  + KY+  +    ++   ++  GG GY+ +  I ++ R+   + IL 
Sbjct: 340 PDK------VSLCAMAKYYSTETCFQIVDSILQMYGGYGYLSDYPIEQYLRDIRVHRILE 393

Query: 445 GSGNAMVLDVLN 456
           G+   M + +  
Sbjct: 394 GTSEVMRMIISR 405


>gi|73537387|ref|YP_297754.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72120724|gb|AAZ62910.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 396

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 83/423 (19%), Positives = 149/423 (35%), Gaps = 45/423 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           A  +     + ++L L  + V     +ELA              P   RW +  +     
Sbjct: 10  AAASTEAPWMTEDLVLFRDTVRRFVERELA--------------PNESRWAEQGYID--R 53

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + RR+   GL C+     +       AH+    +        +      S   A  +  
Sbjct: 54  DVWRRAGQIGLLCASIPEEYGGGGGTFAHEAVITQEMARGICTSLGNNVHSGIVAHYLLN 113

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--- 221
             T    + W P++ S E                 + ++E   G+D+ ++ ++  +    
Sbjct: 114 YGTQAQKEKWLPQMASGEM-------------VAAIAMSEPGAGSDLKSVRTRAVREKTE 160

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKI 279
           +   Y ++G K F+++      + L A+ +   G   V  ++ +     G    R+  KI
Sbjct: 161 NGDCYRINGAKTFITNGYHADLVCLIAKTDPEAGTRGVSLIMVETRDLPGFRRGRILEKI 220

Query: 280 GNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           G +   T EL F +               G  + M+ L    +  A+ +V+ M+ ++   
Sbjct: 221 GQKGQDTAELFFDDVLVPCENLLGEQEGQGFYQLMQQLPQERMIIALGAVASMQRAIELT 280

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y R R V G  L+D    +  +A+   +   A            E K  +  AA A+ 
Sbjct: 281 TDYVRERKVFGQPLLDLQNTRFKLAECKTNATIAATFVNDCMVRLMEGKLDAATAAMAKW 340

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  WC +    +I E ++  GG GY+ E  IAR Y  +    I  GS   M   V 
Sbjct: 341 -------WCTQRNCEIIDECLQLHGGYGYMLEYPIARMYANARVGKIYGGSNEIMKELVA 393

Query: 456 NLL 458
             L
Sbjct: 394 RTL 396


>gi|332020079|gb|EGI60525.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 416

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 108/303 (35%), Gaps = 24/303 (7%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++  + +    + + P++                       L+E   G+D  ++ ++ +K
Sbjct: 132 LILKVGSEEQKQRYLPRL--------------AQDSLSSFCLSEPGSGSDAFSLKTEAKK 177

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +S ++  FI+ A  +   G   +   L D    GL   + ++K+G
Sbjct: 178 DGVEYVINGTKMWISNSDVAQIFIIFANADPAAGYRGITAFLVDRDTPGLKVDKCEDKMG 237

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T  + F N       LLG                 +      +   +  L   I 
Sbjct: 238 LKASGTCMVHFDNVRIPKDNLLGKFGHGYKYAAGFLNEGRIGIGAQMIGIAQGCLDATIP 297

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +     ++  IA    ++  A  L +  A   +  K   +EAA A    
Sbjct: 298 YTLERKQFGQEIFSFQSLQHQIAQAVTELECARLLVYNAARLVEAKKDVVKEAAMA---- 353

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  + A  + A+ ++ +GG G+  +    ++YR+    +I  G+ N  +  +   
Sbjct: 354 ---KLFASETACRITAKCIDFMGGVGFTTDFPQEKYYRDVKIGTIYEGTSNMQLSTIAKC 410

Query: 458 LEK 460
           + K
Sbjct: 411 IRK 413


>gi|229087517|ref|ZP_04219649.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-44]
 gi|228695764|gb|EEL48617.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-44]
          Length = 600

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 88/466 (18%), Positives = 169/466 (36%), Gaps = 50/466 (10%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKISSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKQYLPALATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G    
Sbjct: 152 AAYALTEPGSGSDALGARTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G V    I
Sbjct: 210 --FTAFIVEKEYPGVSTGPEEKKMGIKCSSTRTLILEDALVPKENVLGEIGKGHVIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + +L  +  YA +R      +   P+++  +A++A  I AA + 
Sbjct: 268 LNIGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++   V+ E ++  G
Sbjct: 328 VYRTVGLFESHMSTLTEEQVKDGKAVAASIAEYAIECSLNKVFGSEVLDYVVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G++ E  I R YR+S  N I  G+     L V      GT L + +   L     +  
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVP-----GTFLRKAMKGELPLLQKAQK 442

Query: 481 KKVITILRDSISLCKEDKGLARFL---TEKIALASSAAALYRAGMN 523
            +   ++     +  E   L + L    +KI L  +  A+ + G  
Sbjct: 443 LQEELMMMMPEEVGDEPLALQKHLVSNAKKIGLMVAGLAVQKYGKA 488


>gi|83941397|ref|ZP_00953859.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
 gi|83847217|gb|EAP85092.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
          Length = 571

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 95/481 (19%), Positives = 176/481 (36%), Gaps = 42/481 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLRRSIH 112
           +  E   E V     +E  +M N     L   G   P       V   P +    +    
Sbjct: 27  ERFEDASEDVTRAILEEAGKMTNDVLAPLQRAGDQTPAKLENGVVRTSPGFADGFKAVAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  F  +            +   A L        S      +    +  + +
Sbjct: 87  GGWIGMSADPEFGGMGLPMTLTTAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDAIKE 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y +SG K
Sbjct: 147 LYLPKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            +++   +D       ++LA++ G       +  FLVP+ L +     G+ N L    L+
Sbjct: 194 VYITWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNDDGSLGNANSLKVVSLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   + T  +++    G+L+G        +  M     L      +     +   A+
Sbjct: 254 HKLGIHGSPTCVMQYDKATGWLVGPEQGGMAAMFTMMNNARLGVGGQGIGIAEAAYQHAL 313

Query: 337 HYARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRS 387
            YA  R           G ++D   ++R +  +  +  AA A++   A + D   A  ++
Sbjct: 314 AYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATGQA 373

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E  A A  + PI K +      AV    ++  GG G+IEE   A++ R+    +I  G+ 
Sbjct: 374 EWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTN 433

Query: 448 NAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               +D V   +  G     +L   +E D  ++      +        +  +    +LTE
Sbjct: 434 GIQAMDLVARKMMDGGEAANRLLDEIEADAEAARDVFPNMTDALWQASETLREATDWLTE 493

Query: 507 K 507
           +
Sbjct: 494 Q 494


>gi|307199032|gb|EFN79756.1| Probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Harpegnathos saltator]
          Length = 385

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 133/399 (33%), Gaps = 38/399 (9%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             QEL R        P    Y   G+  WD          +++++ + GL      + + 
Sbjct: 7   EIQELGRKFTREEIIPVAAEYDKSGKYPWD----------IIKKAWNVGLLNLHIPQDYG 56

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +                        ++ +    + V +       K +  ++    +  
Sbjct: 57  GIENGVFDGCLLVEELGYGCTGITTAIATTNLGQTPVIIAGNKEQQKKYLGRLIEEPH-- 114

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                           +TE   G+D+A + ++ +K            W  +  +++ + +
Sbjct: 115 -----------VTAYCVTEPGTGSDVAGVKTKAEKKGKEWILNGTKMWITNGGVANWYFV 163

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+                + +    G+   R +  +G R++ T  + F +        L
Sbjct: 164 LARTNPDPKAPASKAFTGFIVERDWPGVTPGRKEINMGQRASDTRMITFEDVRVPEENVL 223

Query: 303 -NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK         A  S+   + +L EA+ YA  R   G  + +   +   +
Sbjct: 224 FGEGQGFTIAMKTFDRTRPSVAAASIGLAQRALDEAMKYAMERKTFGKPIAEHQAVAFML 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ +  A   + + A + D+          A  +A + K +   +A     +A++  
Sbjct: 284 ADMAIGVETARMATMKAAWATDKNLPN------ATPLASVAKCYAADVANKCATDAVQIY 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+G+  E  + +  R++    I  G+     L +   +
Sbjct: 338 GGAGFNTEYPVEKLMRDAKIFQIYEGTAQIQRLIISRYI 376


>gi|269127099|ref|YP_003300469.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268312057|gb|ACY98431.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 375

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 120/361 (33%), Gaps = 25/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R     GL    +        +     ++       A       +S    +   VA
Sbjct: 37  REVFRVLGRAGLLGLPYPEEVGGGGQPYEVYLQVLEEIAAAWASVAVGVSVHTLACYPVA 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K                  +    +  G  L+E   G+D AA++++  +  D
Sbjct: 97  TYGDEEQRKR--------------LPELLGGELLGGYALSEPHAGSDAAALSTRAVRDGD 142

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W      +D +++ A+     G   +   L DG  +GL +   + K+G   
Sbjct: 143 HYVITGTKAWITHGGEADFYVLFARTSDDGG-RGISAFLIDGRMDGLSFGPPERKMGLTG 201

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T +L F          +G                 L  A  +V   + +L EA+ YAR
Sbjct: 202 STTAQLLFDGARVPAERRIGAEGQGFPIALSALDSGRLGIAACAVGLAQGALDEAVAYAR 261

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +I+   +   +AD+A  + +A A     A   D     S +       A I 
Sbjct: 262 QREQFGRPIIEHQGLGFLLADMAAAVESARATYLEAARRRDRGLPFSRQ-------ASIA 314

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K      A  V  +A++ +GG GY  +  + R  RE+    I  G+     + +   L +
Sbjct: 315 KLVATDAAMKVTTDAVQVLGGYGYTRDFPVERFMREAKVMQIFEGTNQIQRMVIARHLAR 374

Query: 461 G 461
            
Sbjct: 375 A 375


>gi|329122109|ref|ZP_08250717.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965]
 gi|327466916|gb|EGF12432.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965]
          Length = 378

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 144/403 (35%), Gaps = 39/403 (9%)

Query: 63  EYVLSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           ++ ++   +EL  +A     N   P+       G + D V        LL      G+  
Sbjct: 2   DFSITLEQRELIDLARNISENEIAPRALEIDKTG-KMDSV--------LLDILKKTGMTA 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               + +                          +   +  ++  V +  T      +   
Sbjct: 53  LAIPKEYGGAGLDLLTVSMITEELSKGCAGVATICMANALASYPVLIAGTEEQKSSFCNF 112

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           I                       LTE   G+D  A+    QK+ DG Y L+G K F+++
Sbjct: 113 I--------------NNGGIAAFALTEPGAGSDAGAVACHAQKV-DGGYILNGTKCFITN 157

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +++  ++        G   +   + D +  G+   + ++K+G R++ T E+ F + F 
Sbjct: 158 GSIAEKIVVFTNTRKTGGIRGLTAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFV 217

Query: 297 FLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G    MK L         +SV   + SL  A+ YA +R   G  +    
Sbjct: 218 PESSRLGREGMGFKIAMKTLEKSRPVVGALSVGIAQASLESAVRYAHQRKQFGSKISSFE 277

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  IAD+ +   +A AL  +     D             I +P+ K +   +A  V  
Sbjct: 278 MVQDMIADMVIKTESARALVQKACWMLDNDMPSK------GIFSPMAKAYASDVAMEVST 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +++ +GG+GY +E    ++ R++    I  G+     + + N
Sbjct: 332 ISVQVMGGNGYSKENPNEKYMRDAKVMQIYEGTNQVQKIVIAN 374


>gi|312385227|gb|EFR29779.1| hypothetical protein AND_01014 [Anopheles darlingi]
          Length = 425

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 129/369 (34%), Gaps = 26/369 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++ +F P+   ++R    +GL        +             A  ++   L    L   
Sbjct: 76  EEHQFDPS---VVRALFDNGLMGIEVAEQYGGS----------ACNFMTTMLVVEELSKV 122

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +A+ V +  T  +      K+   E       P      +    L+E   G+D  ++
Sbjct: 123 CPATAAFVDIHNT--LVNSLMIKL-GTEEQKKKYLPKLSQEFSGSFALSEPSAGSDAFSL 179

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K  +         W  +S +S  F+++A      G   +   + +    G    +
Sbjct: 180 KTTAKKDGNHYVLNGTKMWISNSDISGVFLIMANANPSAGYRGITTFIVEREYEGFTVGK 239

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++K+G  ++ T  L   N        LG+                +      +   +  
Sbjct: 240 RESKLGICASGTCTLHLDNVRVPEENILGEFGKGYQYAAGFLNEGRIGIGAQMIGLAQGC 299

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   I Y   R   G  L     M+  IA +A +I AA  L +  A   +      ++AA
Sbjct: 300 LDATIPYLLERKQFGSDLYSFQGMQHQIATVATEIEAARLLVYNAARLQEAGVPFLKQAA 359

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       KY+  ++A     + ++ +GG G+ ++    + YR+    +I  G+ N  +
Sbjct: 360 MA-------KYYASEVAQRATVKCIDWMGGVGFTKDFPQEKFYRDCKIGAIYEGTTNMQL 412

Query: 452 LDVLNLLEK 460
             +  +L K
Sbjct: 413 STIAKVLRK 421


>gi|94499472|ref|ZP_01306009.1| fadE13 [Oceanobacter sp. RED65]
 gi|94428226|gb|EAT13199.1| fadE13 [Oceanobacter sp. RED65]
          Length = 383

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 138/378 (36%), Gaps = 29/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L +++   G     +   F        HK+  +   + +    
Sbjct: 27  PHVNDWEEQGSFP--RELYKKAGDAGFLGLGYAEEFGGTPGDVFHKLVFSEEIMRSTSGG 84

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                 S   A   +A   +  + +   P++ S                   L +TE  G
Sbjct: 85  LVASLGSHDIALPPIAKWASKELKERVVPQVLSG-------------DKIAALAITEPSG 131

Query: 208 GTDIAAITSQGQK---ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           G+D+A I ++ +K        Y ++G K F++S     F  +A   G  G   V  +L +
Sbjct: 132 GSDVANIKTRAEKVEVDGKAFYKVNGSKTFITSGERADFYTVAVRTGGDGYGGVSLILIE 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   K+   ++ T EL F +       L+G  N     +        L   
Sbjct: 192 KGTPGFSVGRNLKKMCWWASDTAELFFEDCLVPAENLIGAENTGFFAIMTNFQSERLMLT 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M+     ++L + + Y++ R   G  +    V K  + ++A  +  +  + +++A    
Sbjct: 252 SMANMTAELALDQVMQYSKEREAFGRPIGKYQVTKHKLVEMATKLEVSKTMMYQVAAQMH 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               + +E + A       K +    +  +  +A++ +GG G + E  + R YR++   S
Sbjct: 312 RGVDQVKEVSMA-------KNFATDTSDYITHQAVQIMGGMGLMRECVVERLYRDNRILS 364

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+   M   +   L+
Sbjct: 365 IGGGTREIMNEIIAKQLK 382


>gi|254776056|ref|ZP_05217572.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 386

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 127/354 (35%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   G         +         +           +         +   A  +  + T 
Sbjct: 52  AGKQGFLGMAVPEDYGGGGNPDFRYNTIITEETTRGRYSGIGFGLHNDIVAPYLLALATE 111

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK  + E             +   + +TE   G+D+  I ++  K  D  Y L
Sbjct: 112 EQKQRWLPKFCTGE-------------LITAIAMTEPGTGSDLQGIKTRAVKQGDH-YVL 157

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+++ + SD  I++AQ +   G      L+ +    G    R  +KIG  +  T 
Sbjct: 158 NGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLVVERGMEGFERGRHLDKIGLDAQDTA 217

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F++        L     G +  M+ L    +  A+M+ + M   L + + Y + R  
Sbjct: 218 ELSFTDVHVPAENLLGQEGMGFIYLMQNLPQERISIAVMAAAAMEQVLEQTLEYTKERKA 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++A +      +         + K  +E AA A+        + 
Sbjct: 278 FGKSIGSFQNSRFVLAELATEATVVRMMVDEFVRLHLDHKLTAELAAMAKW-------YS 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    +I   ++  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 331 TEKQVHLIDRCLQLHGGYGYMREYPVARAYLDARVQTIYGGTTEIMKEIIGRSL 384


>gi|261418773|ref|YP_003252455.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297531264|ref|YP_003672539.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|319765590|ref|YP_004131091.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261375230|gb|ACX77973.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|297254516|gb|ADI27962.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|317110456|gb|ADU92948.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 399

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 136/394 (34%), Gaps = 47/394 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   GE +D+  F        +R     L       ++  +     +   A    
Sbjct: 27  PYIKEWDERGE-FDRNIF--------KRLAELNLMGVCIPETYGGMGMD--YNSLAIVCE 75

Query: 142 LMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  +     
Sbjct: 76  ELERGDTAFRTAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQARGEKIG 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             GLTE   G+D+A+I +   +  D         W   + ++D F++ A  +       +
Sbjct: 123 AFGLTEPNAGSDVASIQTTAVRDGDDYILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + + +  G   + +K K+G RS  T EL F N         N+     E  KI +  
Sbjct: 183 SAFIVERTMPGFSSRPIKGKLGIRSGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSA 239

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+   +V+   V L  A       Y   R   G  +    ++++ IA +   +  +  L
Sbjct: 240 LDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQISRLL 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +++    +E +  + E + A+ +A       C  A     +A++  G  GY  E  + R
Sbjct: 300 VYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNEYPVER 352

Query: 433 HYRESPANSILLGSGNA----MVLDVLNLLEKGT 462
           + R S A  I  G+           VL   +   
Sbjct: 353 YLRNSKAPVIYEGTREIHTIMQAEYVLGYRQDKP 386


>gi|195492647|ref|XP_002094081.1| GE21636 [Drosophila yakuba]
 gi|194180182|gb|EDW93793.1| GE21636 [Drosophila yakuba]
          Length = 419

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 136/406 (33%), Gaps = 43/406 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR        P    Y   G      E+      +++++   GL  +        
Sbjct: 43  QLQELARKFTREEIIPVAAQYDKSG------EYP---WPIIKKAWELGLMNNHIPADIGG 93

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +         +A             +  S    + V L       K +  ++        
Sbjct: 94  LDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLL------- 146

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +    G+TE   G+D++ I ++ +K  D         W  +  +++ + +L
Sbjct: 147 ------EEPLVAAYGVTEPGAGSDVSGIKTRAEKKGDEYIINGQKMWITNGGVANWYFVL 200

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    GL   R +  +G R++ T  + F +         N
Sbjct: 201 ARTNPDPKCPPSKAFTGFIVERDTPGLTPGRKELNMGQRASDTRGITFEDVRVP---KEN 257

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   +  L EA+ YA  R   G  +     ++ 
Sbjct: 258 VLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQF 317

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +       A   D+ +  S         A I K     +A  + ++A++
Sbjct: 318 MLADMAIGVETSRLAWRLSAWEIDQGRRNS-------YYASIAKCHAADVANKIASDAVQ 370

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG+G+  E  + +  R++    I  G+     L +   + +   
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416


>gi|321457567|gb|EFX68651.1| hypothetical protein DAPPUDRAFT_62934 [Daphnia pulex]
          Length = 381

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 138/402 (34%), Gaps = 43/402 (10%)

Query: 68  CTAQELAR-MANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QELAR  A  +  P    +   G      E+      L++++   GL     D  F 
Sbjct: 6   REVQELARKFAREDVIPVAAHHDRTG------EYP---WELIKKAHSLGLMNGHIDAEFG 56

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +          A          G  +  +    S V L       K +  ++       
Sbjct: 57  GMGLSNFEGCLIAEELSYGCTGIGTAIEANGLGQSPVILAGNKEQKKKYLGRMI------ 110

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +    G+TE   G+D+A I ++ +K  D         W  +   ++ + +
Sbjct: 111 -------EEPLMCAYGVTEPGAGSDVANIRTKAEKKGDHYVLNGQKMWITNGGHANWYFV 163

Query: 246 LAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+            +   + D    GL   R +  +G R++ T  + F +    L+   
Sbjct: 164 LARTNPDPKAPPHKALTGFIVDRDTPGLTPGRKEINMGQRASDTRGITFEDV---LVPKE 220

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G     KI +          A  +V   + +  EA+ YA  R   G  +     + 
Sbjct: 221 NVLIGEGAGFKIAMGAFDQTRPPVAAGAVGLAQRAYDEAMKYAMERKTFGVPIFKHQAVA 280

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ I  +     R +   D+ +  +         A I K     +A    A+A+
Sbjct: 281 FMLADMAIGIETSRLAWMRASWEIDQGRRNT-------YYASIAKALAGDVANKCAADAV 333

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG+G+  E  + +  R++    I  G+     + +   L
Sbjct: 334 QIFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRVIISREL 375


>gi|121605030|ref|YP_982359.1| acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
 gi|120593999|gb|ABM37438.1| Acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
          Length = 386

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/356 (19%), Positives = 133/356 (37%), Gaps = 20/356 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        F  +    + +++    L   A        +     +  + +  TP  
Sbjct: 46  AMGLFGLTVPEEFGGIGLCVSQEVQVNYELGRTATAFRSVFGTNIGIGSQGILMDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             D+ PK+ S E             + +   LTE   G+D A++ ++ +   D       
Sbjct: 106 KSDYLPKVASGE-------------LVMSFALTEPDAGSDAASLKTRAELDGDHYVLSGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   V   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGPGAGGVSSFIVPADLPGIKLGKTDKKMGQRGTKTCDVI 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L+ + ++    +  L E++ YAR R   G
Sbjct: 212 LENVRVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVACGMAQRILEESVGYARDRKQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   ++ A  +L   +A  FD  K          +     K +C +
Sbjct: 272 KAIGEFQLIQAMLADSQAELLAGWSLVQDVARRFD-GKPAHVSDPDISMRVSCAKLFCTE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           M   V    ++  GG+GYI E  + R YR+S    +  G+     + +   L +  
Sbjct: 331 MVGRVADRGVQVHGGAGYINEYPVERFYRDSRLLRLYEGTTQIQQIIIGRELMRQG 386


>gi|254245003|ref|ZP_04938325.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192]
 gi|126198381|gb|EAZ62444.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192]
          Length = 387

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 147/410 (35%), Gaps = 27/410 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   + L   A       H   P    WD+    P    ++R +   G        
Sbjct: 2   DFDLTEEQRLLVESARAFAR--HELAPKAADWDRDHHFPE--EVIRAAAEQGYLGLYIAE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +              +     +S    +A M+A      + + W P +   E
Sbjct: 58  EDGGLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGDAVLKEAWLPGLIGGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A + ++ ++  D  Y L G K F+S   S  
Sbjct: 118 -------------SLASYCLTEPDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQ 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++    G  G   +   L      G+ Y R ++K+G R+  T  + F          +
Sbjct: 164 VLIVMARTGEDGARGISCFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRI 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V  MK L    L+ A  S+   + +L +++ Y   R   G  L     ++  +
Sbjct: 224 GPEGQGFVYAMKGLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ A+  +    A+  D         A A +   + K +       V  EA++  
Sbjct: 284 ADMLTELTASRQMVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           GG GY+ +  + R  R++  + IL G+   M + V   L +   + ++L 
Sbjct: 338 GGYGYLNDYPLERWVRDTRVHQILEGTNEIMRVIVARRLLEQGGMLDRLL 387


>gi|195375915|ref|XP_002046743.1| GJ12315 [Drosophila virilis]
 gi|194153901|gb|EDW69085.1| GJ12315 [Drosophila virilis]
          Length = 347

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 142/365 (38%), Gaps = 28/365 (7%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             +  R+    G      D  +         H I    +   +        + S    + 
Sbjct: 1   MRSFWRKLGELGYLGITVDPEYGGTGGSYLDHSIVVEEISRASGAVGVSYGAHSNMCINQ 60

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +++  T    + + PK+ S  +               GL ++E   G+D+ A+  + ++ 
Sbjct: 61  LSINGTHEQKQQYLPKLCSGVH-------------IGGLAMSEVGAGSDVLAMKLRAERK 107

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            D  Y L+G K+++S+   +D  I+ A+    G      +   + + S  G    +  +K
Sbjct: 108 GD-YYLLNGTKFWISNGSDADTLIVYAKTGASGDPDRKAITAFIIETSWEGFSVGKKLDK 166

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEA 335
           +G R ++T EL F N        L      V  +   +  + A++S   +  M+ +   A
Sbjct: 167 LGIRGSSTCELVFDNVKVPAKNVLGQENNGVYVLMSGLDYERAVLSGVSMGLMQAACDVA 226

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R   G ++ +  +++  +AD+   I++  +  + +  S D     S++ A   +
Sbjct: 227 FEYAHERKQMGKLIGEFQLIQGKMADMYTTISSCRSYFYTVVRSLDAGMRSSKDCAGVFL 286

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +       C + +  V  +AM+ +GG+GYI +    R  R++    I  G+       + 
Sbjct: 287 L-------CGEKSTQVALDAMQILGGNGYINDYPTGRILRDAKLCEIAGGTAEIRRWLIG 339

Query: 456 NLLEK 460
             L +
Sbjct: 340 RQLNQ 344


>gi|163746186|ref|ZP_02153545.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161380931|gb|EDQ05341.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 136/376 (36%), Gaps = 28/376 (7%)

Query: 89  PGGERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           P     D K EF P    L       GL     +  F        AH +    +   +  
Sbjct: 31  PMAAEIDTKNEFPP---ELWTEMGELGLLGMTVEEEFGGSGLGYVAHTVAVEEIARASAS 87

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +    + S    + + L  T      + PK+ S E+                L ++E  
Sbjct: 88  VSLSYGAHSNLCVNQIKLNGTAEQKAQYLPKLCSGEH-------------VGALAMSEVG 134

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+ ++    +K +D         W  + P ++  ++ A+ +   G   +   L + S
Sbjct: 135 AGSDVVSMKLNAEKRNDHFRLNGNKYWITNGPDAETLVVYAKTDPEAGSKGITAFLIEKS 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G       +K+G R + T EL F +       +LG+       +        +  A +
Sbjct: 195 MKGFTTSNHFDKLGMRGSNTAELIFDDCEVPFENILGEEGKGVRVLMSGLDYERVVLAGI 254

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M   L E + Y   R   G  + D  +M+  +AD+   + +A A  + +A + D  
Sbjct: 255 GLGIMAACLDEIMPYMAERKQFGQRIGDFQLMQGKMADMYTAMNSARAYVYSVAQACDRG 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++AA           +  + A     +A++ +GG+GY+ +  + R +R++    I 
Sbjct: 315 DVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGAGYLSDNPVGRIFRDAKLMEIG 367

Query: 444 LGSGNAMVLDVLNLLE 459
            G+     + V   + 
Sbjct: 368 AGTSEIRRMLVGREMM 383


>gi|221198533|ref|ZP_03571578.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221207762|ref|ZP_03580769.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221172259|gb|EEE04699.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221180984|gb|EEE13386.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 596

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 100/517 (19%), Positives = 194/517 (37%), Gaps = 63/517 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G        +E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLEESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVSATPGFREAFRQFVEGGWQGLQHPTDYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGSDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      PI K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  +   L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKE-DKGLARFLTEKIALASS 513
           + GK          +  ++  + L+  +   +A A  
Sbjct: 475 ALGKLDGAAAASMKAQLEQGAQALSSVVDYVLANAKQ 511


>gi|265754313|ref|ZP_06089502.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA]
 gi|263235022|gb|EEZ20577.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA]
          Length = 568

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +     ++  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDGRGLSMFIYDKNEGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            E + YA+ R   G  +ID P +   ++ +   + A  AL ++ +   D          E
Sbjct: 309 NEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P++K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL-FSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +     +E +  S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYIATLRNYEAIPCSEEMQLLMDRVKEMANKFDA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE +       +AR L E  A+   +  L +  
Sbjct: 489 CTNAVKEAQNQELLDFVARRLYEMAAVCIMSHLLIQDA 526


>gi|254722338|ref|ZP_05184126.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
          Length = 569

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PKI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLPKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 DGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPAENVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  +   YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLGHIVEEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI----TILRDSISLCKEDKGL 500
            V  +L K     E     ++        + I     +L+ S+    +  GL
Sbjct: 404 TVAKMLMKQMEQIEDTEVEIDVANVERNHRYILLAKKLLKQSLKTLSKTPGL 455


>gi|197104356|ref|YP_002129733.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477776|gb|ACG77304.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 382

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 30/309 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +  T      + P + S E             +     LTE   G+D  A+ ++  + 
Sbjct: 97  LVMFGTEAQKARYLPGVASGE-------------IVTSFALTEPEAGSDSGAVQTKAVRD 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D        ++  ++  +D F ++A+ +    G   V   L + +  G+   + + K+G
Sbjct: 144 GDDYVLNGSKRYITNANRADLFTVMARTDPSKPGGSGVSAFLVERNLPGVTVGKPEKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            +     ++ F N         N   G  E  KI +       L  + + V      +A+
Sbjct: 204 QQGAHICDVNFDNVRVPA---ENRLGGEGEGFKIAMQVLDRGRLHISAICVGVAERLIAD 260

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YA  R   G  L +  +++  IAD   +  AA AL    A   D  +S + EAA A 
Sbjct: 261 SVAYAAERKQFGQALSNFQLVQGMIADCKTEALAARALVMETARKRDAGQSVTMEAAAA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY+  +M   V   A++  GG+GYI E  I R YR+     I  G+     + +
Sbjct: 320 ------KYFASEMVGRVADRAVQIFGGAGYIAEYGIERFYRDVRIFRIYEGTSQIQQVII 373

Query: 455 LNLLEKGTN 463
                K   
Sbjct: 374 ARETMKRGG 382


>gi|256368485|ref|YP_003105991.1| isovaleryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|255998643|gb|ACU47042.1| isovaleryl-CoA dehydrogenase [Brucella microti CCM 4915]
          Length = 382

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 133/382 (34%), Gaps = 26/382 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    P    L R     G+        +        AH I    +   +
Sbjct: 23  RIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYGGAGMGYLAHCIAMEEISRAS 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    +P     + PK+ S E+                L ++E
Sbjct: 81  ASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH-------------VGALAMSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++    +K  D         W  + P +D  ++ A+ +   G   +   + +
Sbjct: 128 PGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLVVYAKTDLSAGPRGISAFIIE 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L      V  +   +  +  +++
Sbjct: 188 KGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGTEGKGVNVLMSGLDYERVVLA 247

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M   L   + Y   R      + +  +M+  +AD+ +   A+ A  + +A + D
Sbjct: 248 GGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLADMYVTFNASRAYVYAVAAACD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  + A  +  +A++ +GG+GYI +    R  R++    
Sbjct: 308 RGETTRKDAAG-------CILYSAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYE 360

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   L + T 
Sbjct: 361 IGAGTSEIRRMLIGRELFQETR 382


>gi|195125824|ref|XP_002007375.1| GI12421 [Drosophila mojavensis]
 gi|193918984|gb|EDW17851.1| GI12421 [Drosophila mojavensis]
          Length = 421

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 136/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  +  DK++      +  ++    G      +  +         H I    +   A   
Sbjct: 61  PYAKEIDKLDSFKDLRSFWKKMGELGFLGITAEPEYGGTGGTYLDHCIIMEEISRAAGGV 120

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    TP   + + PK+ S E+               GL ++E   
Sbjct: 121 ALSYGAHSNLCINQLTKNGTPEQKEKYLPKLCSGEH-------------IGGLAMSEPGA 167

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDG 265
           G+D+ ++  + ++  D         W  +   ++  I+ A+    G      +   + + 
Sbjct: 168 GSDVVSMKLRAERKGDYYVLNGSKFWITNGSDAETLIVYAKTGASGVPDRHAITAFIIET 227

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R ++T EL F +       +LG  N     +        L  A 
Sbjct: 228 GWEGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENKGVYVLMSGLDFERLVLAA 287

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V  M+ +   +  YA +R   G ++ +  +++  +AD+   + A  +  + +A + D 
Sbjct: 288 GPVGLMQAACDVSFDYAHQRKQMGKLIGEFQLLQGKMADMYTTLGACRSYLYSVARACDA 347

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S++             +  + A  V  EA++ +GG+GYI +    R  R++    I
Sbjct: 348 GIRSSKD-------CAGVILYSAEKATQVALEAIQILGGNGYINDNPTGRILRDAKLYEI 400

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 401 GAGTSEIRRWLIGRQLNQ 418


>gi|293606863|ref|ZP_06689211.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814715|gb|EFF73848.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 391

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/420 (20%), Positives = 160/420 (38%), Gaps = 43/420 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           ++ A  P+ +  +L L      +    E              + P  +RW + +   A  
Sbjct: 7   SMPATGPAWMDADLTLF--QDATRRVFE------------KEFAPDEDRWRRQQH--ADR 50

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           ++  ++   GL C     ++       AH+   A     A +        S   A  +  
Sbjct: 51  SIWEKAGRLGLLCVSMPEAYGGGGGNFAHEAIVAAEQARAMVYGFSNNVHSAILAHYILN 110

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P + S               +   + ++E   G+D+ ++ +   +  D 
Sbjct: 111 YGTEAQRRRWLPSMASG-------------DLVGAIAMSEPGAGSDLKSVRTTAARDGD- 156

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNR 282
           +Y ++G K F+++   +D   ++A+ +   G   V  ++ +     G    +L  K+G +
Sbjct: 157 VYVINGSKTFITNGLHADLICVVAKTDPSAGTRGVSLIMVETLDLPGFRRGKLLEKLGQK 216

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           S  T EL F +    +   L  + G      M+ L    L  A+ +V+ MR ++ + + Y
Sbjct: 217 SLDTAELFFDDVRVPVANLLGEAEGQGFTQLMQQLPRERLLIAVGAVATMRRAIDDTVAY 276

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R V G  LID    +  +A+       A       A   D+  +R  +       A 
Sbjct: 277 TKTRQVFGQALIDLQNTRFKLAECETIATIA-------ARFVDDCIARQLQGTLDLSTAA 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K+W  +M   VI E ++  GG GY+ E  IAR Y ++    I  GS   M   +   +
Sbjct: 330 MAKWWTTQMNCQVIDECLQLHGGYGYMLETPIARMYADARVGKIYGGSNEIMKEIIARGM 389


>gi|332838246|ref|XP_508872.3| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Pan
           troglodytes]
          Length = 415

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCAWMIDSFGNGEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKKQGDH-YILNGSKAFISGAGESDVYVVMCRT-GGPGPKGISCIVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  ++      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 285 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMATRLVAARLMVRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRILISRSLLQ 414


>gi|333022707|ref|ZP_08450771.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332742559|gb|EGJ73000.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 393

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 134/398 (33%), Gaps = 26/398 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS   QE  R A  +  +     P     D+    P  H         GLH       
Sbjct: 16  YELSALHQEF-RAAARDLAR-KELAPRSAEVDERGGFP--HDTYAILTAAGLHAPGIPEE 71

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +            A      A   +  +++ +    + + L  T    + + P++ + E 
Sbjct: 72  YGGDGVDALAAALAVEEVARACASSSTVLTSNKLGVTPLLLHGTEEQKRRYLPEVAAGE- 130

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                         +   ++E+  G+D+ A+  +  +  DG        W  S+ ++   
Sbjct: 131 ------------ALMAYAISEREAGSDVGAMRCRATEDGDGWVLDGVKTWITSAGVARYL 178

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           ++ A  +   G   +   +      G+ Y   + K+G + + T E+ F  T    G LLG
Sbjct: 179 VVFAVTDPGAGSRAISAFVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLG 238

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +                +     ++   + +L  A+ Y + R   G  + D   ++  +A
Sbjct: 239 ERGRGMRVALGTLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + +A  L +  A                       K      A AV  +A++ +G
Sbjct: 299 DMAVRVESARQLVYAAAARSASRAPD------LTYFGAAAKCLASDTAMAVTTDAVQLLG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY  +    R  R++    I  G+     + +   L
Sbjct: 353 GYGYTRDFPAERMMRDAKITQIYEGTNQIQRVVIARQL 390


>gi|332284726|ref|YP_004416637.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330428679|gb|AEC20013.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 607

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/529 (17%), Positives = 188/529 (35%), Gaps = 71/529 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VE 98
           +L  L      +     E +   ++    +E AR        L+        +W    V 
Sbjct: 13  ILHELADLDGVLALPGFEEVSSDLVDAVLEENARFVEQAIAPLNRNGDTTAAKWSDGSVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +          G      ++ F      +     A+     A L     + P +T 
Sbjct: 73  TSPGFKQAFTEFGQGGWQGLQHEQEFGGQGLPKLVGAPASENINAANLA--FSLCPLLTD 130

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
             + AL             + S E        M +      + LTE + G+D+A + ++ 
Sbjct: 131 GVIEALAA-----------VGSHEQQSRFIPAMLEGRWTGTMNLTEPQAGSDLAQVATRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
            +  DG Y LSG K F++    D       ++LA+          +  F+VP+ L +   
Sbjct: 180 VRQDDGSYRLSGQKIFITYGEHDMAENIVHLVLARTPDAPKGVKGISLFIVPKFLVNEDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEF--------SNTFGFLLGDLNVSTGPVEDMKI 314
             G  N +    L++K+G   + T  L +            G+L+G+ N     +  M  
Sbjct: 240 SLGDRNDVWCASLEHKLGIHGSPTAVLLYGSGKGDVGEGAVGYLVGEENRGLEYMFIMMN 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDI 366
                  I  V+    +  +A  YA  R              + + P ++R +  +    
Sbjct: 300 AARYAVGIQGVALSERAFQQATAYAHERVQGQALEGSAGPVAIANHPDVQRMLFTMKALT 359

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIG 420
             A +L++  A + D+++   ++A  A+  A      P+ K +  +++  V +  ++  G
Sbjct: 360 EGARSLAYVAAAACDKSRRHPDQAERAKNKALYEYLVPVVKGFSTELSIEVASLGVQVHG 419

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G+IEE   A++YR++    I  G+      D +                + +D G+  
Sbjct: 420 GMGFIEETGAAQYYRDARILPIYEGTTAIQANDFVG-------------RKVLRDGGAVV 466

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMNDI 525
           K ++  +R ++   ++    ++   E +AL     ++    Y      +
Sbjct: 467 KVLVQEMRATVEQLEKAAAASKSDAEGLALIARRLAAGIQAYEKASGFV 515


>gi|195442770|ref|XP_002069119.1| GK23895 [Drosophila willistoni]
 gi|194165204|gb|EDW80105.1| GK23895 [Drosophila willistoni]
          Length = 420

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 144/438 (32%), Gaps = 47/438 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
             +  L+A+        +   G  + L+   Q+   +A   T     P    Y   G   
Sbjct: 10  PAIRQLVASRSYAAVTHVSPTGTSFALTEEQQQFQELARKFTREEIIPVAAQYDKSG--- 66

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      +++++   GL  +        +          A             +  
Sbjct: 67  ---EYP---WPIIKKAWELGLMNNHIPADLGGMDLDVFTTCLTAEELAYGCTGIMTALEA 120

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V L       K +  ++              +  +    G+TE   G+D+  I
Sbjct: 121 SGLGQTPVILSGNKEQKKKYLGRL-------------MEEPLVAAYGVTEPGAGSDVGGI 167

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 168 KTRAEKKGDEYIINGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERDSPGLT 227

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 228 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGAV 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L EA+ Y+  R   G  +     ++  +AD+A+ +  +       A   D+ + 
Sbjct: 285 GLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRR 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K     +A  + ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 345 NS-------YYASIAKCHAADVANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEG 397

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     L +   + +   
Sbjct: 398 TSQIQRLIISRNMYEAAK 415


>gi|169826437|ref|YP_001696595.1| long-chain specific acyl-CoA dehydrogenase [Lysinibacillus
           sphaericus C3-41]
 gi|168990925|gb|ACA38465.1| Long-chain specific acyl-CoA dehydrogenase [Lysinibacillus
           sphaericus C3-41]
          Length = 382

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 130/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K    P      RR    G  C   +  +  +    +  +             
Sbjct: 28  PHYAQWEKDHLIPL--TFWRRLGDMGYLCPQVEEQYGGLGLDFSFGVIIQEELERIGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +    T      W PK  S  Y                + +TE   G
Sbjct: 86  IGIGLHNDIVVPYIESYGTHEQKSRWLPKCISGHY-------------ITAIAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I +   +  D  Y ++G K F+++ +    +++A +           +  L+ + 
Sbjct: 133 SDLANIQTTAIRDGDH-YIVNGQKTFITNGIHTNLVVVAVKTNPSAEKKHQGISLLVIED 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 192 GTPGFTKGRKLEKVGMHAQDTAELFFEDCRVPAHNLLGEEGKGFVYMMEKLQQERLAVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + + +   LA  + Y + R   G  + D    +  IA++A  +    +    L      
Sbjct: 252 AAQTAIEDMLALTLDYVKSRQAFGKSIGDFQNTQFKIAEMATKMELGKSFLETLIEEHLA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K              + KYW  + A  +  + M+  GG GY+EE  IAR YR+ P  SI
Sbjct: 312 GKD-------VVTKVSMAKYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + +   L
Sbjct: 365 YAGTNEVMKVIIAKNL 380


>gi|332141164|ref|YP_004426902.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551186|gb|AEA97904.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 586

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 97/507 (19%), Positives = 180/507 (35%), Gaps = 57/507 (11%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           IA+F S +  E+   G          L R  +    +L           KV     +   
Sbjct: 30  IADFDSELANEIIAQGAKFALDVVAPLNREGDEEGCKLED--------GKVTTPKGFADA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +  + +G +  +    ++         +    +   A L        + ++   V    
Sbjct: 82  YQEYVANGWNAMLGVAEYDGQDLPYTMAVPVHEMLNAANLSWRLTTMLTESATLAVTKHA 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S E+  T             + LTE   GTD++ ++++ +   DG Y
Sbjct: 142 SKELKDIYLAKLISGEWTGT-------------MNLTEPHAGTDLSLLSTKAEPQGDGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            ++G+K F+++   D       ++LA++         +  FLVP+ L D     G  N L
Sbjct: 189 MITGNKIFITAGDQDWSSNVIHLVLARLPDAPKGVKGISLFLVPKFLPDANNEPGEANTL 248

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +++ T  + F    G+L+G+ N     +  M         +  +     
Sbjct: 249 SVGSIEHKMGIKASPTCVMNFDGAKGYLVGEENQGLACMFTMMNDARFQVGLQGLGAAEA 308

Query: 331 SLAEAIHYARRRHVS----------GG--ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S   A+ YAR R  S          G    ++ QP + R +      I    ALS   A 
Sbjct: 309 SYQGALTYARERVQSRAPQGIQNPDGKADPIVFQPDVARMLLTQKSLIEGCRALSLFYAK 368

Query: 379 SFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             D     E + + +     + + PI K +   M     +  ++  GG G+I E  + + 
Sbjct: 369 FMDVEKLGEGQEKEDAEKILQFLTPICKAFMTDMGLETTSLGVQVFGGHGFIREWGMEQL 428

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R+     +  G+     LD++   L   G  + E  +      +G         L   I
Sbjct: 429 MRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQMMEATYKAFSALVGDIQDSEAKNLAQGI 488

Query: 492 SLCKEDKGLARFLTEKIALASSAAALY 518
            L       A  L      A+SAA  Y
Sbjct: 489 -LDDWRASSADCLGMDATTAASAACDY 514


>gi|90411318|ref|ZP_01219330.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
 gi|90327847|gb|EAS44178.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK]
          Length = 389

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 133/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLM 143
               P     D+    P  + L       GL        +    +   AH I    +   
Sbjct: 29  EHIAPIAADIDRDNQFP--NHLWSLFGEMGLLGVTVSDEYGGADMGYLAHVIAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    T R    + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTQRQRDKYLPKLIDGSH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +   ++ A+ +       +   + 
Sbjct: 134 EPNAGSDVISMQLKAELEGDHYVLNGTKMWITNGPDAHTIVVYAKTDPSAKSHGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G  + +  +K+G R + T EL F N       +LG +N     +        +  
Sbjct: 194 ERDFKGFSHAQKLDKLGMRGSNTCELVFENCRVPQENILGKVNHGVEILMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACLDLVVPYVHDRKQFGRSIGEFQLVQAKVADMYTRMNAARAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  ++AA           +  ++A  +  + ++ +GG+GYI E S  R  R++   
Sbjct: 314 DRGETTRKDAAG-------VILYSAELATQLALDTIQLLGGNGYINEFSAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|325673563|ref|ZP_08153254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555584|gb|EGD25255.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/416 (20%), Positives = 141/416 (33%), Gaps = 42/416 (10%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
              PS    E+  L E       +E+                  E+W+          + 
Sbjct: 3   RYVPSWHDDEVRALSELAAGFFEREVV--------------AHNEKWEAQRHID--RDVW 46

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R +   GL C      +       AH +        A   A  +   S   A  V    T
Sbjct: 47  RTAGKLGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYAGDLAFGVSVHSGIVAHYVNEYGT 106

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + W P + S E             +   +G+TE   G+D+ AI +   +  D  Y 
Sbjct: 107 EEQKRTWLPGMASGE-------------ILGAIGMTEPGAGSDLKAIRTTAVRDGDH-YV 152

Query: 228 LSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNA 285
           ++G K F+++  S   I+LA + + + G   V  L+ D     G    R+ +K+G  +  
Sbjct: 153 VNGSKTFITNGSSADMIVLAVKTDPKAGARGVSLLIVDLRDCPGFTVGRVLDKVGQHAAD 212

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F +       LLG+     G +    +   L  A  +   M  ++ E + Y + R
Sbjct: 213 TSELSFVDVKVPVSNLLGEEGQGFGQLIAQLVQERLIIAAQASGAMNRAVEETVAYVKSR 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L +       +A+                      +  + EAA A       KY
Sbjct: 273 QAFGHSLFEFQNTAFELAECQTIARTCEVFLDHCIQEHLRGELDAAEAAMA-------KY 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W       V+   ++  GG GY+ E  +AR Y ++    I  G+   M   +   L
Sbjct: 326 WLTDKQCEVVDRCVQLHGGYGYMREYLVARMYEDARVQKIYAGANEVMKGIIAKSL 381


>gi|264676620|ref|YP_003276526.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207132|gb|ACY31230.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 395

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 141/398 (35%), Gaps = 28/398 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               +  R A     Q     P     D+ +  P    + R+    G+        +   
Sbjct: 14  GEDIDALRDAVREFAQ-SEIAPRAAEIDRSDQFPM--DVWRKFGELGVLGITVPEQYGGA 70

Query: 128 -VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            +   AH +    +   +        + S    + +    +      + PK+ + E+   
Sbjct: 71  DMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGSEAQKAKYLPKLITGEH--- 127

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  + +             W  + P +D  ++ 
Sbjct: 128 ----------VGALAMSEPGAGSDVISMKLKAEDKGGYYLLNGNKMWITNGPDADTLVVY 177

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ E  +G   V   L +    G    +  +K+G R + T EL F +         N+  
Sbjct: 178 AKTEPEMGARGVTAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPA---ENILG 234

Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360
           G     K+L+  LD     ++G  + + ++     + Y   R   G  + +  +++  +A
Sbjct: 235 GLNMGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVA 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + A  + ++ +A + D     ++     R        WC + A  +  E ++  G
Sbjct: 295 DMYTVLQAGRSFAYTVAKNLD--LLGTDHVRQIRKDCASVILWCAEKATWMAGEGVQIYG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GYI E  + R +R++    I  G+     + +   L
Sbjct: 353 GNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 390


>gi|254384717|ref|ZP_05000055.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343600|gb|EDX24566.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 386

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 154/408 (37%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 4   DHRLTPEHEELRRTVEEF-----AHDVVAPKIGDLYERHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    ++W P++ S
Sbjct: 59  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKREWLPRMCS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             +    GLTE  GG+D     +   K  D  + ++G K F+++  +
Sbjct: 119 GE-------------ILGAFGLTEPDGGSDAGGTRTTAVKDGDE-WVINGSKCFITNSGT 164

Query: 241 D--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D    + +  V GR   G   +  ++      G       +K+G  S+ T EL F +   
Sbjct: 165 DITGLVTVTAVTGRKADGRPEISSIIVPSGTPGFTVAAPYSKVGWNSSDTRELSFQDVRV 224

Query: 297 FLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
            L   +     G  + ++I   LD   +++S +   LA     E++ YA+ R   G  + 
Sbjct: 225 PLANLVGAEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAKERKAFGRPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +AD+ +    A       A+     +   +EAA       I K +   +A  
Sbjct: 282 DNQAIQFKLADMEMRAHMARIGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAVD 334

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 335 NARDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|78065649|ref|YP_368418.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77966394|gb|ABB07774.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 596

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/498 (19%), Positives = 187/498 (37%), Gaps = 62/498 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFCGE---VLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPSEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     +  G  + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCK 495
           + GK          +  +
Sbjct: 475 ALGKLDGAAAASVKAQLE 492


>gi|296162108|ref|ZP_06844905.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887614|gb|EFG67435.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 379

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 134/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G R D+      W      +  +GL C      +        H        
Sbjct: 29  PRQVEWDKAG-RVDR----DTWLK----AGREGLLCLTLPTEYGGGGGDFGHAAILNEEV 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L        S   A  +A +      + W PK  + E               + +G
Sbjct: 80  NRAGLSGLGFGVHSDIIAPYIARIGNEEQKQKWLPKTCTGE-------------AILAIG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ AI +   +  D  Y ++G K F+S+ + +D  I++ + +   G   V  
Sbjct: 127 MTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSAGSRGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
           ++ + +  G    R  +K+G  S  T EL F N    +   LG+       +        
Sbjct: 186 IVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLMGELPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  AI + + +   L   I+Y + R      + D    K  +ADI     A   L     
Sbjct: 246 LSIAIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKLADIKAQATAVRVLV---- 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D   +           A I K +  +     + + ++  GG GY+ E  +AR + ++
Sbjct: 302 ---DHYLAEHVRRRLTLEEAAIAKLFATESLGKALDDMVQLHGGYGYMLEYPVARAFADA 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
             N I  G+   M   +   L
Sbjct: 359 RVNRIYGGTSEVMRDLISRKL 379


>gi|291523045|emb|CBK81338.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 379

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H +  +    G         +      +  K                L++    +  +  
Sbjct: 39  HHIAEKMAELGFMGINVPEEYGGAGMDEVSKALVIMEIAKVDASVAELLAVHTLTNDIFL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K +                +  +       LTE   G+D +A  ++     D
Sbjct: 99  KRGTEEQKKKYL--------------ALGASGKVGAFALTEPGAGSDASAAKTKAISDGD 144

Query: 224 GIYCLSGHKWFLSS--PMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y ++G K F+S+  P    +++L A  +   G   +  ++ D +  G    +L+NK+G
Sbjct: 145 D-YIINGTKCFISNMGPEEGDYVVLIALTDPSAGTKGMSAIVVDRNTPGFSVGKLENKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE----- 334
            R     EL F +         N+     E  KI +  LD   + ++   V +AE     
Sbjct: 204 LRGANVSELIFQDCRVPKS---NLLGKEGEGFKIAMAALDGGRIGMASQAVGIAEGAIDL 260

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YA+ R      +     ++   ADIA    AA  L+ + A+     ++  + AA A 
Sbjct: 261 AVAYAKERVQFKKPISANQGIQWYFADIATSTEAAKMLTLQAADLRQRGQNIGKLAAMA- 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY+  + A  V  +A++  GG GY++E +I R YR++   ++  G+     + +
Sbjct: 320 ------KYYASENAVTVTNKALQIHGGYGYMKEYAIERMYRDARITTLYEGTSEVQKMVI 373

Query: 455 LNLL 458
              +
Sbjct: 374 SRAV 377


>gi|87122711|ref|ZP_01078586.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86162008|gb|EAQ63298.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 587

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/524 (17%), Positives = 179/524 (34%), Gaps = 57/524 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHP 101
           A +A   +   +E++   + ++     E  +++      L H     G R     V+   
Sbjct: 19  AGLARLNAHREEEVD---QDLVEAILSEAGKLSEQCIAPLNHTGDQEGSRVVNGDVQEAK 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    +  +  G         F       +         + A L        S  S   
Sbjct: 76  GFKEAFKEYVEGGWSSLAGSEEFGGQGLPFSLAAAVNEGVMSANLAFSLCPLLSQGSIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + P + S E+  T             + LTE   G+D+AAI ++    
Sbjct: 136 IETHGSQALKDKFLPNMVSGEWTGT-------------MNLTEPNAGSDLAAIAAKATPN 182

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----G 265
            D    +SG K F++            ++LA++         +  FLVP+ L       G
Sbjct: 183 GDHF-LVSGQKIFITWGDHQMTDNVIHLVLARLPDAPAGVKGISLFLVPKYLVKDDGSLG 241

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             N +    ++ K+G  ++ T  + F       G+L+G  +     +  M         +
Sbjct: 242 ERNDVTVVSVEKKLGIHASPTCVMSFGENQGAIGYLVGQEHQGIMAMFTMMNNARQGVGL 301

Query: 323 MSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++    +  +A+ YA+ R             +I+ P + R +  +   I A  +L   
Sbjct: 302 QGLAIAERAYQQALDYAKDRVQGMSADRSKRAPIIEHPDVLRMLMTMKSQIDAMRSLVLS 361

Query: 376 LANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            A   D     +   +        +  PI K W  + A  + + A++  GG G+IEE  +
Sbjct: 362 AAVEIDLANATQGPEQRSHKERVNMYTPIVKGWITEQAQEITSLAIQVHGGVGFIEETGV 421

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL---EKG---TNLFEQLFSTLEQDLGSSGKKVI 484
           A+H R++    I  G+     LD++      +KG   +N  E L + ++       K   
Sbjct: 422 AQHARDARILPIYEGTNGIQALDLIGRKMYSDKGLGFSNWVEDLTAEVQVAKSLGIKGTD 481

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
            +L     L    +     + +   L + +A         +   
Sbjct: 482 LVLNALSDLTLSKQACLAQMNDDAVLGTGSAYALMMQTGYVVGA 525


>gi|331698985|ref|YP_004335224.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953674|gb|AEA27371.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 383

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 125/392 (31%), Gaps = 26/392 (6%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E  R A     +     P     D+   +P         +  G H       +      +
Sbjct: 15  EALREAVRALAE-KEIAPFAAEVDEQARYPV--EARDALVKAGFHAVHIPEEYGGEGADE 71

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                           +  + + +   +  + L  +  + +     I             
Sbjct: 72  LAACIVIEEVARVCASSSLIPAVNGLGSIPILLSGSEELKQLVLSDI------------- 118

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                 I   L+E+  G+D A++ ++ ++  D         W  ++  S  + ++A  + 
Sbjct: 119 -ARGAGISYALSEREAGSDAASMRTRARRDGDDWILDGTKCWITNAGESTWYTVMAVTDP 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
                 +          G      + K+G   + T E+ F         ++G        
Sbjct: 178 EKRANGISAFAVHRDDPGFEVGPKERKLGIAGSPTREIYFQGCRIPGDRIIGAEGTGFKT 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                          +V   + +L  AI YA+ R   G  + +   ++  +AD+A+ + A
Sbjct: 238 ALRTLDHTRPTIGAQAVGIAQGALDVAIAYAKDRRQFGKAIAEFQGLQFMLADMAMKVEA 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +  A+  +  +           ++   K     +A +V  +A++ +GG+GY  + 
Sbjct: 298 ARQLVYVAASRAERGEPN------LGFISSAAKCMASDVAMSVTTDAVQVLGGAGYTRDF 351

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + R  R++    I  G+     + +   L K
Sbjct: 352 PVERMMRDAKITQIYEGTNQVQRMVMARALLK 383


>gi|194751229|ref|XP_001957929.1| GF10656 [Drosophila ananassae]
 gi|190625211|gb|EDV40735.1| GF10656 [Drosophila ananassae]
          Length = 420

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 147/439 (33%), Gaps = 48/439 (10%)

Query: 41  SLLVALIANFPSVVH-KELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGER 93
             L  L+A   +     ++   G  + L+   Q+L  +A   T     P    Y   G  
Sbjct: 10  PALRQLVAQSRAYAAVSQVSPNGTSFALTEEQQQLQELARKFTREEIIPVAAQYDKTG-- 67

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
               E+      +++++   GL  +        +          A             + 
Sbjct: 68  ----EYP---WPIIKKAWELGLMNNHIPADLGGMDLDVFTTCLTAEELAYGCTGIMTALE 120

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    + V L       K +  ++              +  +    G+TE   G+D+A 
Sbjct: 121 ASGLGQTPVILSGNKEQKKKYLGRLL-------------EEPLVAAYGVTEPGAGSDVAG 167

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGL 270
           I ++ +K  D         W  +  +++ + +LA+      C         + +    GL
Sbjct: 168 IKTRAEKKGDEYIINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDTPGL 227

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
              R +  +G R++ T  + F +         NV  G     KI +          A  +
Sbjct: 228 TPGRKELNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGA 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   +  L EA+ Y+  R   G  +     ++  +AD+A+ +  +       A   D+ +
Sbjct: 285 VGLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGR 344

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S         A I K     +A  + ++A++  GG+G+  +  + +  R++    I  
Sbjct: 345 RNS-------YYASIAKCHAADVANKIASDAVQIFGGNGFNSDYPVEKLMRDAKIYQIYE 397

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     L +   + +   
Sbjct: 398 GTSQIQRLIISRNMYEAAK 416


>gi|73539142|ref|YP_299509.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72122479|gb|AAZ64665.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 385

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/357 (18%), Positives = 133/357 (37%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    + +                +   +V   S  + +  T   
Sbjct: 46  EMGLFGISIPENYGGIGLSMSQECDVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PKI S E             + I   LTE   G+D A++ ++ +   D       
Sbjct: 106 KQAYLPKIASGE-------------LIISFALTEPNAGSDAASLQTKAELDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGPGASGISSFIVPADTPGISLGKPDKKMGQRGTKTCDVV 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YA+ R 
Sbjct: 212 LENARVPAANIIGGVPGVGFKTAMKV---LDRGRLHLSALACGMAHRLITDAVAYAKERK 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   +      ++A  TK +
Sbjct: 269 QFGKPIGDFQLIQGMLADSQAELYAGLSMMRDCAQRYD-AKPAGKSDPEVSMLASCTKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   +   A++  GG+GYI E    R YR+     +  G+     + +   L +
Sbjct: 328 CTEMVGRIADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQVIIAKHLLR 384


>gi|50550801|ref|XP_502873.1| YALI0D15708p [Yarrowia lipolytica]
 gi|49648741|emb|CAG81061.1| YALI0D15708p [Yarrowia lipolytica]
          Length = 421

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/430 (18%), Positives = 156/430 (36%), Gaps = 48/430 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
            L A     P     E E +   ++S  A E+               P     D+ E   
Sbjct: 32  ALRAYSTRPPVTHFSEEEEMFRDMVSKFADEVIA-------------PKVREMDEAEQMD 78

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SAS 160
               +++    +GL        F          I               +     T   +
Sbjct: 79  --KTIIQDMFDNGLMGIETPEEFGGAGANFTSAIIVVEELAKVDPSVSVMNDVHNTLVNT 136

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +  +   + P++ +                     L+E   G+D  A+ S+  K
Sbjct: 137 CIRSWGSDALRNKYLPQLAA--------------QKVGSFALSEPSSGSDAFAMKSRATK 182

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             DG        W  ++  ++ FI+ A ++   G   +   + +    G+   + + K+G
Sbjct: 183 TDDGYILNGSKMWITNAAEAELFIVFANLDPSKGYKGITAFVVEKDM-GVQIAKKEQKLG 241

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----E 334
            R+++T  L F + F   +   N+     +  KI I  L+   + ++   + LA     +
Sbjct: 242 IRASSTCVLNFEDVF---IPKENLLGEEGKGYKIAIECLNEGRIGIAAQMLGLAGGAFKK 298

Query: 335 AIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  YA   R   G  + +   M+  I   A +I AA  L +  A   +     ++EAA A
Sbjct: 299 ATGYAFNDRKQFGQYIGEFQGMQHQIGQAATEIEAARLLVYNAARLKEAGVPFTKEAAMA 358

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  ++A  V ++A+E +GG G+  E ++ + +R+S   +I  G+ N  +  
Sbjct: 359 -------KLYASQVAGNVASKAVEWMGGVGFTREETLEKFFRDSKIGAIYEGTSNIQLQT 411

Query: 454 VLNLLEKGTN 463
           +  +++K + 
Sbjct: 412 IAKIIQKESA 421


>gi|297155712|gb|ADI05424.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 390

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 129/358 (36%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL   ++   F    +     ++       A+L  G  +S    +   +A
Sbjct: 48  RELFALLSRSGLLGLVYPEEFGGGDQPYEVYLQVLEELAAARLTVGLGVSVHTLACHALA 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +     +  P +                 +     L+E   G+D A +T++  +  D
Sbjct: 108 HYGSKDQIAEHLPAMLGG-------------GLLGAYCLSEPSSGSDAAGLTTRAAREGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W     ++D + ++ +  G      +   L  G  +GL     + K+G + 
Sbjct: 155 GWTLTGSKAWITHGGIADFYTVMTRT-GPDRTRGITAFLVPGDASGLSAAAPERKMGMKG 213

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T ++   +        +G+                L  A  S+   + +L EA+ Y  
Sbjct: 214 SPTAQIHLEDVHVPDARRIGEEGQGFAIALSALDAGRLGIAACSIGLAQAALDEAVAYTA 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + D   ++  +AD+A  I A  AL    A   D  +  S++AA A       
Sbjct: 274 QRRQFGHPVADFQGLRFMLADMATQIEAGRALYLAAARLRDAGRPFSKQAAMA------- 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +C   A  V  +A++ +GG GY  +  + R+ RE+    I+ G+     + +   L
Sbjct: 327 KLFCTDTAMKVTTDAVQLLGGYGYTADFPVERYMREAKVLQIVEGTNQIQRVVIARHL 384


>gi|163755824|ref|ZP_02162942.1| tryptophan synthase subunit beta [Kordia algicida OT-1]
 gi|161324345|gb|EDP95676.1| tryptophan synthase subunit beta [Kordia algicida OT-1]
          Length = 388

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/357 (19%), Positives = 145/357 (40%), Gaps = 24/357 (6%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           +  +    G     +  ++  +             Y +  LE    ++    +A   A+ 
Sbjct: 42  IWEKFGEMGFFGIAYPEAYGGMDLD--------LFYTVILLEELQRINSGGFAA---AIW 90

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
               +      K  S E       P         L +TE  GG+D+A + +   K  D  
Sbjct: 91  AHAYLAMTHVNKEGSHEIKEKYLTPSITGEKIGCLCITEPFGGSDVAGMRTTAVKKGD-K 149

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F+++ + SD  ++ A+    +G   +   + D    G+   +L +K+G +++
Sbjct: 150 YIINGSKTFITNGVYSDYLVVAAKTNPELGNKGISIFIMDRDTPGISATKL-DKLGWKAS 208

Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F N       L+G+ N+    +     L  L  AI + +    ++   + Y   
Sbjct: 209 DTGEIAFDNVEIPIENLMGEENMGFPYIMQHFALERLIMAINAHARAEFAIEYTLQYMSE 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +AD+A ++      ++ +A+  D+ +   +E       A ++K
Sbjct: 269 RQAFGRTIDKFQALRHTMADLATEVEVCKTFNYAVASRLDKKEYVVKE-------ATMSK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               KMA  VI + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++
Sbjct: 322 LQSTKMADNVIYQCLQMLGGYGYMEEYPLARMLRDSRLGPIGGGTSEILREIIAKMI 378


>gi|306842687|ref|ZP_07475330.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306287133|gb|EFM58635.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 389

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 12  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGVTAPEDYG 67

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 68  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 126

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 127 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 174

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 175 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 234

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 235 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 295 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 348 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 389


>gi|284164461|ref|YP_003402740.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284014116|gb|ADB60067.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 381

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 135/375 (36%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P  +  D  +  PA   L+      GL    +   +        ++ I    +   +   
Sbjct: 26  PVAQGIDHDDEFPA--DLVSEMAELGLMGMPFPEEYGGAGLDYHSYAIGLEEISRGSGGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  + +M+         +++               P+ +        L+E   
Sbjct: 84  GTIVAAHTSLAGNMLYEFGDESQKEEYL-------------TPLAEGRDIGAFALSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE-DGS 266
           G+D+ A+ +  +K  D      G  W  +  ++D   + A+ +   G   +   +     
Sbjct: 131 GSDVPAMDTVAEKEGDEYVINGGKLWISNGSVADTVTLFAKTDPDAGNKGITSFIVRPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIM 323
            +G   +  ++K+G++   T EL F          L     G V  +K      +  A  
Sbjct: 191 DDGFIVEGTEDKLGDKGCPTAELRFDEMRIPESRRLGEEGEGFVHALKTLNGGRITIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   R +  EA  YA  R   G  + +   +K  +AD+   I AA  L  + A+     
Sbjct: 251 GVGIARAAFEEARDYANEREQFGQPIGEFQSIKHKLADMDTKIQAAKMLMHKAADKKIRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++  ++       A   K +  +++  V  E ++  GG GY ++ +  R YR++  N I 
Sbjct: 311 ENYIKD-------ASQAKLYASEVSREVANEGIQIHGGYGYTKDFAAQRFYRDAKLNEIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   +   + + L
Sbjct: 364 EGTSEVLRNTIGDQL 378


>gi|170750227|ref|YP_001756487.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656749|gb|ACB25804.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 579

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/492 (19%), Positives = 182/492 (36%), Gaps = 53/492 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P      L   G       A  L R+ + +        P  +   +V   P W    R  
Sbjct: 25  PDDAEAILTEAGRIAAGVIA-PLNRVGDRHG------TPFAD--GQVTTPPGWREAYRTF 75

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP 168
              G +    +         +   I AA   +         + P +T   + AL    + 
Sbjct: 76  TEGGWNGLSAEADHGGQGLPK--LIEAACTEMWNGANLAFGLCPLLTQGGIEALAAHGSD 133

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   +  K+ S  +  T             + LTE + G+D+A + ++     DG Y +
Sbjct: 134 DLKARYLEKLVSGAWPAT-------------MNLTEPQAGSDLALLRTRAVPAGDGTYRI 180

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +G+K +++    D       ++LA++         +  FLVP++L DG+ N L    +++
Sbjct: 181 TGNKIYITYGEHDLADNIVHLVLARLPDAPAGTRGISLFLVPKVLPDGTRNDLRCSGIEH 240

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T  + F +     G+L+G  N     +  M     L+  +  V     +   
Sbjct: 241 KLGIHASPTCSMAFGDQVGATGWLIGQENKGLACMFTMMNAARLNVGLQGVGVAEAATQR 300

Query: 335 AIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           A+ YA+ R              +   P ++R +  +    AAA A+ +  A + D AK  
Sbjct: 301 ALAYAQERRQGKAVGAAEATSPIAAHPDVQRMLLTMKASTAAARAICYLTAAALDAAKGP 360

Query: 387 SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +AA   A ++ P+ K +   +A  V +  ++  GG G++EE   A+  R++    I  
Sbjct: 361 EGQAALDRASLLTPVAKAFATDLANEVTSLGVQVHGGMGFVEETGAAQLMRDARILGIYE 420

Query: 445 GSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG-LA 501
           G+       L    L   G        + + +      K          +  ++  G L 
Sbjct: 421 GTNGIQAIDLAARKLPLNGGGTARSQIAWMRRAAEGLLKAGDPAFGHMAARLRDGIGSLD 480

Query: 502 RFLTEKIALASS 513
           R  + ++A  SS
Sbjct: 481 RATSHQLAALSS 492


>gi|158424598|ref|YP_001525890.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331487|dbj|BAF88972.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 596

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/469 (17%), Positives = 168/469 (35%), Gaps = 61/469 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKEL---ELLGEYVLSCTAQELARMANYNTPQLH 85
           P    M       +L  L     S   K+L   E +   ++    +E  ++       L+
Sbjct: 6   PPLRDMRF-----VLHEL---HGSDALKDLKGCEDISTDLIDAVLEEAGKLVTEVLAPLN 57

Query: 86  AY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
                 G R++   V     +    +  +  G +    D  +       +       +  
Sbjct: 58  VVGDAEGCRYENGVVRTPTGFTDAYKTYVEGGWNGIACDPEWGGQGLPASVTKFVEEMMC 117

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L  G     +  +   +    +  + + + PK+    +  T             + L
Sbjct: 118 SANLSFGLYPGLTHGAYQALNSHASQELKERFLPKMVEGVWSGT-------------MCL 164

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  + ++ +  +DG Y ++G K F+S+   D       ++LA++        
Sbjct: 165 TEPHCGTDLGLLRTKAEPQADGSYKITGSKIFISAGEHDLTENIIHLVLARLPDAPKGIK 224

Query: 252 RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G  NG+    +++K+G   +AT ++ F    G+L+G  +   
Sbjct: 225 GISLFLVPKFLPTEDGRPGPRNGVTCTGIEHKMGLNGSATCQMSFDEATGWLVGTPHKGM 284

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  M     L      +     S   A+ YAR R                  +I  P 
Sbjct: 285 AAMFTMMNSERLSVGTQGLGIGEASYQSAVAYARDRVQGRALSGAKYPEKAADPIIVHPD 344

Query: 355 MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++R++  +        ALS  +A + D      + + R +   +  +M PI K     + 
Sbjct: 345 VRRSLMTMRAYNEGCRALSGWVARNLDLMERSNDPEERQQAEDFTALMTPIVKALFTDLG 404

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
               +  ++  GG GYI +  + ++ R++    I  G+     LD++  
Sbjct: 405 FTNASLGVQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGIQALDLVGR 453


>gi|126327516|ref|XP_001374385.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase-8 [Monodelphis
           domestica]
          Length = 415

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 140/376 (37%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +RR+   G                +                 
Sbjct: 62  PQMAEWDQKEIFPV--ESMRRAAQLGFAGVYVRSDVGGSELSRLDASIIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       M+           + P + S E                   LTE   G
Sbjct: 120 TAYISIHNMCTWMIDFFGNEEQRHKFCPSLCSME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  L+ +   
Sbjct: 167 SDAASLLTSAKRQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGSGPKGISCLVIEKDT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S+    + F +    +   +     G +  MK      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSHPIRAVIFEDCVVPVANRIGDEGQGFLIAMKGLNGGRINVASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A +Y   R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 285 LGAAHASIVLARNYLNVRKQFGKPLASNQYLQFKLADMATRLVASRLIIRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE A A ++  + K +  +   ++  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERADAMVLCSMAKLFATEECFSICNKALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSDEVMRMLISRNLLQ 414


>gi|160899128|ref|YP_001564710.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364712|gb|ABX36325.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 388

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 137/406 (33%), Gaps = 38/406 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            +  S  A   A +A           P    WD+    P     + ++   G        
Sbjct: 11  AFAESARAFAQAELA-----------PHAAHWDRESIFP--REAIAKAGELGFCGLYAPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +   +   +                    ++    +  M+    T  V  +W   + S  
Sbjct: 58  NAGGLQLPRLDATMVFEELAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEALTSG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                              LTE   G+D  ++ ++ +      Y ++G K F+S   S D
Sbjct: 117 ------------RKLASYCLTEPGAGSDAGSLKTRAELAG-HEYIINGAKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+  +   G   +          G+ Y + + K+G  S  T  + F N       
Sbjct: 164 MLVLMARTGDAGSGASGISAFAVPADLPGISYGKKEEKMGWNSQPTRVISFDNVRIPAQN 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L +A  Y   R   G  +     ++ 
Sbjct: 224 LLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALTQAQQYMHERKQFGKPIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V  EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFVTDAGFMVCNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   + +G  
Sbjct: 338 LHGGYGYIREYPLERLMRDARVHQILEGTNEIMRVIIARRMLEGDA 383


>gi|94314071|ref|YP_587280.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357923|gb|ABF12011.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 381

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 141/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +RW K ++      +  ++   G+ C+     +       AH+         A + +
Sbjct: 29  PNEDRWWKQQYID--REVWYKAGEMGMLCASIPEEYGGGGGTFAHEAIITMEQGRAGVSS 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    T    + W PK+ + E             +   + ++E   G
Sbjct: 87  LGTNVHSGIVAHYILRYGTEEQKRKWLPKMATGE-------------LVAAIAMSEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGS- 266
           +D+ ++ ++  K  D  Y ++G K F+++      I ++ + +   G   V  ++ +   
Sbjct: 134 SDLKSVKTRALKEGD-SYVINGSKTFITNGYHANLILVICKTDPEAGARGVSIVVVETDG 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAI 322
             G    R+  K+G +   T EL F +        L      G  + M+ L    +  A+
Sbjct: 193 QQGFRRGRILEKMGQKGQDTAELFFDDMRVPCANLLGTEEGKGFYQLMQQLPQERMIIAL 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +++ M  +L   I Y R R V G  LI+    +  +A+   +   A +           
Sbjct: 253 GALASMERALGLTIEYVRNRKVFGESLIELQNTRFRLAECKTNATIARSFVNDCMEKILR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     AA A+        WC + +  +I E ++  GG GY+ E  IAR Y  +  + I
Sbjct: 313 GELDPGTAAMAKW-------WCTQRSCEIIDECLQLHGGYGYMMEYPIARMYVNARVSKI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   L
Sbjct: 366 YGGSNEIMKELIAREL 381


>gi|289467871|gb|ADC95620.1| isovalery-CoA dehydrogenase [Brucella melitensis bv. 1 str. M5]
          Length = 382

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|94469208|gb|ABF18453.1| mitochondrial medium-chain acyl-CoA dehydrogenase [Aedes aegypti]
          Length = 422

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 144/433 (33%), Gaps = 47/433 (10%)

Query: 41  SLLVALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGERW 94
               AL +     V      +G  + +S   +E+  M          P    Y   G   
Sbjct: 14  PACRALSSKAAPAVEA--SSMGPSFAMSDEXKEIVDMTKKFVREEIIPVAGQYDKTG--- 68

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
              E+      ++R++   GL  +                   A             +  
Sbjct: 69  ---EYP---WPIIRKAWELGLMNNHIPADIGGTDMSIMTSCMIAEELAYGCTGIMTALEA 122

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + V +   P   K+            T    + +  +     +TE   G+D+  +
Sbjct: 123 SGLGQTPVIIAGNPEQXKN-----------GTRLGRLLEEPLVAAYCVTEPGAGSDVNGV 171

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  +  +++ + +LA+      C         + +    GL 
Sbjct: 172 KTRAEKKGDEYILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERDTPGLT 231

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSV 325
             R +  +G R++ T  + F +         NV  G     KI +          A  +V
Sbjct: 232 PGRKEQNMGQRASDTRGITFEDVRVP---KENVLIGEGSGFKIAMGTFDKTRPPVAAGAV 288

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EA+ Y+  R   G  +     +   +AD+A+ +  A  ++ + A   D+ + 
Sbjct: 289 GLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETARLITMKSAWEVDQGRR 348

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A I K +   MA  V ++A++  GG+G+  E  + +  R++    I  G
Sbjct: 349 NS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEG 401

Query: 446 SGNAMVLDVLNLL 458
           +     + +   +
Sbjct: 402 TSQIQRMIISRNM 414


>gi|322434140|ref|YP_004216352.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321161867|gb|ADW67572.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 387

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 141/386 (36%), Gaps = 42/386 (10%)

Query: 87  YGPGGERW-------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
               GER        D+ +   A   L+R     GL                      A 
Sbjct: 24  RDFAGERIAPLVRQMDEAQTMDAG--LIRELFGLGLMGIEVPEELGGAGGSF-FDACLAI 80

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +     A  +M     +  + AL    +    K + P++                   
Sbjct: 81  EAISEVDPAVGVMVDVQNTLCINALNKWGSDEQKKRYLPRM--------------AKDTI 126

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
               L+E   G+D  A+ ++  +            W  ++  +  +++ A ++  +G   
Sbjct: 127 GSYCLSEAASGSDAFALQTRATQRGSDYVLNGQKLWITNAKEAGLYLVFATLDPALGYKG 186

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + +    G    + ++K+G R+++T EL F +    ++G   V   P +  KI I 
Sbjct: 187 ITGFVVEKGTPGFSVGKKEDKLGIRASSTCELVFQDC---VVGADQVLGEPGKGYKIAIE 243

Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+   + +    + LA      A  +A+ R   G  L++   M+  +A++A +I  A  
Sbjct: 244 TLNEGRIGIGAQMLGLASGAWGHAAKWAKERKQFGKALVEFQAMQFQLAEMATEIEMAKL 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +  A   D      +EAA         KY   ++A    + A+E  GGSG+++E  + 
Sbjct: 304 MVYNAARLKDNGSEFLKEAAM-------CKYVASQVAEKTASLAVEVFGGSGFVKEFPVE 356

Query: 432 RHYRESPANSILLGSGNAMVLDVLNL 457
           + YR++    I  G+    +  +  L
Sbjct: 357 KLYRDAKIGKIYEGTSFMQLATIAKL 382


>gi|294651447|ref|ZP_06728761.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822693|gb|EFF81582.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 600

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 88/484 (18%), Positives = 160/484 (33%), Gaps = 63/484 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  F       +  I  + +   A    G     S  +   +    +      + P + 
Sbjct: 97  ADEEFGGQALPNSLGITISEMVGTANWSWGMYPGLSHGAVRTLEHHGSDEQKATYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +   DG Y +SG K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPNDDGSYAISGEKIFISAGE 203

Query: 240 SDA-----FIMLAQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G   G   +   +            G  N +    +++K+G   
Sbjct: 204 HDMADNIIHIVLARLPGAPKGTKGISLFIVPKFNLNADGSIGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 264 NATCVINFDKAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEE 383

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  K    I+   +   K++  +  F+ 
Sbjct: 444 ATEIQALDLLG-------------RKVLQTQGAMLKDFTKIIHKFVEANKDNAAMQEFVA 490

Query: 506 EKIA 509
              A
Sbjct: 491 PLAA 494


>gi|226305373|ref|YP_002765331.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184488|dbj|BAH32592.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 118/350 (33%), Gaps = 24/350 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +   F    +     ++               +S    S   +    T    
Sbjct: 50  QAGLLSLPYPEEFGGGDQPYEVYLQVLEEIASRWAAVAVAVSVHSLSCFPLFTFGTDEQK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P +                +      L+E + G+D AA++ +      G       
Sbjct: 110 ARWLPDMLGG-------------NTIGAYSLSEAQAGSDAAALSCKATATDGGYRINGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +   +D + + A+     G   +  LL D    GL + + + K+G R+  T    +
Sbjct: 157 AWITNGGKADFYNLFARTSDD-GSRGISCLLVDKDTEGLSFGKPEEKMGLRAVPTASANY 215

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            + F     L+G                 L  A ++V   + +L +A+ YA+ R   G  
Sbjct: 216 DDAFVPDERLIGQRGQGLPIAFSALDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKR 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +ID   +   +AD+A  + +A A     A   D     S         A + K      A
Sbjct: 276 IIDHQGLGFVLADMAAAVDSARATYLDAARRRDAGVPYSR-------NASVAKLVATDAA 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++  GG GY ++  + R+ RE+    I  G+     L +   L
Sbjct: 329 MKVTTDAVQVFGGYGYTQDFPVERYMREAKITQIFEGTNQIQRLVIARQL 378


>gi|148654496|ref|YP_001274701.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148566606|gb|ABQ88751.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 383

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 133/376 (35%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    PA  A LR+    GL    +   +            A      A    
Sbjct: 26  PRARHVDETGEFPA--ATLRKMAELGLMGLPFPEEYGGAGADSISTAIAIEEVARACGST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + S  +      +A+  T    + +               P  +        LTE   
Sbjct: 84  ALIYSAHLGLGCAPIAMFGTEEQKRRFL-------------RPAAEGRHLGAFALTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  +  +          W  S+ ++   I+ A  +       +  ++     
Sbjct: 131 GSDAGATRTTARLENGEWVINGAKMWITSASVAGHLIVTAVTDPGERHS-ISAIIVPAGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL + + + K+G R + T  + F +        L      ++    L  LD   + +  
Sbjct: 190 PGLSFGKPEAKMGLRGSITNAVTFEDVRVPEENLLGRRGRGLQQF--LAVLDGGRIGIGA 247

Query: 328 MRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M + LA+A       YAR R   G ++     +   IAD+A+ + AA  L ++ A   D+
Sbjct: 248 MAIGLAQAAFEIASAYARERTAFGKLIGAYESVSNMIADMAVGLEAARLLVYQAAWLKDQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S EAA       I K +  ++   +  +A++ +GG GY  E  + R YR+    +I
Sbjct: 308 GRQYSREAA-------IAKLYASEVGEKICRDAIQVLGGYGYSSEYPLERIYRDQRLLTI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   + + +   +
Sbjct: 361 GEGTSEILRVVIARQI 376


>gi|222147473|ref|YP_002548430.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221734463|gb|ACM35426.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 597

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/539 (17%), Positives = 182/539 (33%), Gaps = 71/539 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLH--------AYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            ++     E A++A      L+             G     V     +          G 
Sbjct: 36  DMIEAIVGEAAKLAEEQLFPLNLSGDQEGCTRNADG----SVAVPKGFKEAYDAYCAGGW 91

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKD 173
                   +        + + AA    M+      +M P +T  ++ A+    T +  + 
Sbjct: 92  SGLAVPPEYGGQGLP--YVLHAAVGEYMSSANMALMMYPGLTQGAIAAILAHGTDQQKQT 149

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+    +  T             + LTE   GTD+  + ++     DG Y +SG K 
Sbjct: 150 YLPKMVEGTWSGT-------------MNLTEPHCGTDLGLLRTKAVPNGDGTYKISGQKI 196

Query: 234 FLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F+S+           ++LA++EG       +  F+VP+++       G+ NG+    +++
Sbjct: 197 FISAGEHGMSENIIHLVLARIEGAPEGTKGISLFIVPKVIVGEDGALGAKNGVSCGAIEH 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G   NAT  + +    G+L+G  N     +  M     L   +  +S   ++   A+ 
Sbjct: 257 KMGIHGNATCVMNYDEATGYLIGAENKGLSAMFVMMNEARLGVGLQGLSIAEIAYQNAVT 316

Query: 338 YARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YAR R                  +I  P ++RA+  I     A  A +   A   D A  
Sbjct: 317 YARERIQGRSLSGAKAPDKTADPIIVHPDIRRALMTIKAFNEAGRAFTLWTALKSDIAHR 376

Query: 386 RSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + A          +M PI K             A +  GG GYIEE  ++++ R++  
Sbjct: 377 AGDAAEKQTADDILGLMTPILKGVLTDKGFDHAVMAQQVYGGHGYIEEWGMSQYVRDARI 436

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCK 495
             I  G+     LD++   L   G      LF+ +      +   +K+    +       
Sbjct: 437 AMIYEGANGIQALDLVGRKLGLNGGRAVMALFNEIGAFCEENRENEKLSFFTKQLKKGLN 496

Query: 496 EDKGLARFLTEKIAL----ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           + +    +  +        A + +  Y      +   ++  +     H          +
Sbjct: 497 DAQASTMWFMQNAMAKPDNAGAGSTDYMHLFGLVVLGYMWAKMAKAAHEALESGPSDAD 555


>gi|242019871|ref|XP_002430382.1| ATP-binding cassette subfamily E, member 1 [Pediculus humanus
           corporis]
 gi|212515506|gb|EEB17644.1| ATP-binding cassette subfamily E, member 1 [Pediculus humanus
           corporis]
          Length = 419

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 136/406 (33%), Gaps = 48/406 (11%)

Query: 66  LSCTAQELARMANYNT-----PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSI 119
           L+ T QE   +A         P++  Y   GE  WD          L++++   GL    
Sbjct: 38  LNDTQQEFQNLARKFAREEIIPKVAEYDKSGEYPWD----------LVKKAHSIGLLNPG 87

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
                  +      +         A       +  +    + V +       K +  ++ 
Sbjct: 88  IPSELGGLGLGVFDECLITEELAYACTGISTALMSTCLGQTPVLIAGNKEQQKKYLGRLI 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                        +  +     +TE   G+D++ + ++ +K  D         W  +  +
Sbjct: 148 -------------EQPLVAAYCVTEPGAGSDVSGVKTKAEKKGDEYVINGQKMWITNGGV 194

Query: 240 SDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           ++ + +LA+ +              + D    G+   R +  +G R++ T  + F +   
Sbjct: 195 ANWYFVLARTDPNPKTPAGKAFTGFIVDRDTPGITVGRKEINMGQRASDTRGITFEDVRV 254

Query: 297 FLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                 NV     +  KI +          A  +V   + +L EA  YA  R   G  + 
Sbjct: 255 P---KENVLLKEGDGFKIAMGAFDRTRPPVAAAAVGLAQRALDEASKYAMERKTFGVPIF 311

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +A++A+ +  +    +R A   D+ +  +         A + K     +A  
Sbjct: 312 SHQAVAFLLAEMAIGVETSRLAWWRAAWEVDQGRRNT-------YYASVAKALAADIANK 364

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 365 CATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 410


>gi|265983201|ref|ZP_06095936.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306839983|ref|ZP_07472777.1| isovaleryl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|264661793|gb|EEZ32054.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306404947|gb|EFM61232.1| isovaleryl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 392

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 137/402 (34%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L       T       P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFTE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELMFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|229584058|ref|YP_002842559.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019107|gb|ACP54514.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 546

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/495 (21%), Positives = 209/495 (42%), Gaps = 35/495 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N ++ D  L  ++  F   V  +   LGE+      +    +     P    +   GE
Sbjct: 16  GKNHFNIDKPLQKILEYF--DVKADFSKLGEFAGGELYEIAEHVDKRARPIHVMWSVNGE 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+V   P+  A ++R I D      +D +  P   +  HK   A +YL++      ++
Sbjct: 74  RVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASIYLVSDPGIACIL 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +    +  + K +   +                 +      TE +GG+D+ 
Sbjct: 127 TITNQTAYALYKYGSEELKK-YVSYLIG----------DSDELLFGATWFTEIQGGSDLG 175

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN-- 268
           +   + +            K+F S   ++D  ++ A+  G   G   +   L     N  
Sbjct: 176 SNLVEAEFNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKGLSLFLVPKKNNKG 235

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K G  S  T E+EF+++  +L+G+       + +  ++  L +A+ ++ 
Sbjct: 236 EKNFLIRRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITEDLMVSRLSNAVGALG 295

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385
             R S  E+ +Y++ R   G  LI+ P++++ + ++ L I     ++F+  + F ++   
Sbjct: 296 IARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVVTFKAIDQFQKSWKA 355

Query: 386 ----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E+  YAR++  I+K+   ++A  V   AME  GG G++EE  I R +RE+    
Sbjct: 356 MPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEEFPIERLHREALITP 415

Query: 442 ILLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKED 497
           I  G+GN   L++L  + K      L   L   + +       K +  ++D + +L    
Sbjct: 416 IWEGTGNIQALEMLEAMVKKEAHIQLIRDLEGIVNEAKDEIASKTLDFIKDKATTLLTYR 475

Query: 498 KGLARFLTEKIALAS 512
           +   +F ++ + L  
Sbjct: 476 EYEMQFYSKDLLLTL 490


>gi|48425405|pdb|1RX0|A Chain A, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425406|pdb|1RX0|B Chain B, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425407|pdb|1RX0|C Chain C, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND.
 gi|48425408|pdb|1RX0|D Chain D, Crystal Structure Of Isobutyryl-Coa Dehydrogenase
           Complexed With SubstrateLIGAND
          Length = 393

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 40  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTST 97

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 98  TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 144

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 145 SDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGT 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  ++      ++ A  S
Sbjct: 203 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCS 262

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 263 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVAL---- 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 319 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 376

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 377 GSNEVMRILISRSLLQ 392


>gi|89093403|ref|ZP_01166352.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
 gi|89082382|gb|EAR61605.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92]
          Length = 590

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/541 (18%), Positives = 207/541 (38%), Gaps = 84/541 (15%)

Query: 12  MNQVHQPS-DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M+  + P  D+ F L+Q    +G      DSL  +L          +L+     +++   
Sbjct: 1   MSTYNPPLKDTGFVLDQ---LVGF-----DSLCESL----------DLQEANMELVNVVV 42

Query: 71  QELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
           +E  ++A      L++     G    +  V     +    ++ + +G         F   
Sbjct: 43  EEAGKLAADVLAPLNSVGDQNGATVSEGAVTETAGFADAYQQYVENGWATLTGPEEFGGQ 102

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDP 185
                + +  A   L      G  + P ++  ++ AL    +  +   + P++ S E+  
Sbjct: 103 ALP--NVLGTAVNELWHSANMGFGLCPLLSQGAVEALIAHGSDELKTQYLPQLISGEWTG 160

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE   G+D+AA++++     D  Y +SG K F++         
Sbjct: 161 T-------------MNLTEPNAGSDLAAVSAKAMPDGD-TYKISGQKIFITWGDHQMASN 206

Query: 242 -AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVEL 289
              ++LA+  +   G   +   +            G+ N +    L++K+G   + T  +
Sbjct: 207 IVHLVLARLPDAPAGVKGISLFIVPKYLLDEQGQPGALNDVSCVSLEHKLGIHGSPTCVM 266

Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +     G+L+G+ N     +  M         +  +S    +  +A+ Y++ R    
Sbjct: 267 SFGDNGGATGYLIGEPNKGLSYMFTMMNHARQSVGLQGLSISERAYQQALEYSQERLQGS 326

Query: 347 GI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPI 399
                   +I+ P ++R +  +     A  AL+   A   D       E+     +  PI
Sbjct: 327 NPDGSKIAIINHPDVRRMLMAMKSGNEAMRALALSAAADIDRTHHGDAESKTRVELYTPI 386

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K W  ++A  + +  ++  GG G+IEE   A+HYR++    I  G+     LD++    
Sbjct: 387 VKGWMTELAQEITSLNIQVHGGMGFIEETGAAQHYRDARILPIYEGTTGIQALDLIGR-- 444

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC-----KEDKGLARFLTEKIALASSA 514
                 + LF     D G++  ++ T +R ++ L       E + L   L + +  A++A
Sbjct: 445 ------KTLF-----DKGAALAQLQTDIRSTVELLTSSSTAELQELGVQLNQSLNAATAA 493

Query: 515 A 515
           +
Sbjct: 494 S 494


>gi|296282905|ref|ZP_06860903.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium
           bathyomarinum JL354]
          Length = 382

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 127/360 (35%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R +   GL  +     +        H++          +E       +      + 
Sbjct: 43  REFWREAGEAGLLGASVPEEYGGHGGDFRHEMVVIDQQGRHNVEGFAASLHNTIILPYLV 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + P++ S               +   + +TE   G+D+ +IT+   K  +
Sbjct: 103 RHGTEEQKKKYLPRLVSG-------------DLVSAIAMTEPGVGSDLQSITTTALKDGN 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNR 282
           G        +  +  ++D  I++A+ +       +   LLE     G    +  +KIG  
Sbjct: 150 GYKINGAKTYISNGQIADFIIVVAKTDPNERAKGISLMLLETEGAEGFQRGKKLDKIGLD 209

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           S  T EL F + F      L G+       +        L  A+ ++S +  +L E + +
Sbjct: 210 SQDTSELFFDDVFVPAENVLGGEEGKGFYQLMGELPQERLIIAMGAMSTIERALEETLAF 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D    +  +A++     AA            E K            A 
Sbjct: 270 TKERKAFGKTIWDFQNTQFTLAELKARATAAKVFVNHCIAQHLEGK-------LDVPTAC 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K W  ++   V+ + ++  GGSGYI +  IAR +R+S  + I  GS   M + +   +
Sbjct: 323 MAKLWLTELQGEVVDKCLQLHGGSGYINDYPIARMFRDSRVSRIFGGSNEIMKMVIARGM 382


>gi|126726340|ref|ZP_01742181.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126704203|gb|EBA03295.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 380

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 132/375 (35%), Gaps = 25/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K E  P    L  +    GL               +           MA    
Sbjct: 26  PFARQWEKDEIIP--KDLWPKFGELGLGAIYVPEEDGGSGLTRLDGTLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     ASM+A   T  V       + S                 +   LTE   G
Sbjct: 84  AAFLSIHNMCASMMAANATDEVKSRMMADVVSM-------------KTVVSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  + +DG        +      SDA+I++A+  G  G   V  +L +    
Sbjct: 131 SDAAALKTRADRTNDGFNLTGTKAFISGGGYSDAYIVMART-GDAGPSGVSAMLVEDGSE 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +  L++K+G RS  T +++  N       LLG+                L+ +  S+
Sbjct: 190 GLSFGGLEDKMGWRSQPTRQVQLDNCNIPTANLLGEEGKGFTYAMKGLDGGRLNISACSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++   + Y   R   G  +     ++  +AD  +++ AA     + A   D    
Sbjct: 250 GAAQAAMDTTLAYMGERKAFGKTIDQFQALQFRLADNEIELQAARTFLRQAAWKLDTGSP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K    ++   V+   ++  GG GY+ +  + +  R+   + IL G
Sbjct: 310 D------ASKFCAMAKKHATEVGSRVVDSCLQLHGGYGYLADYGLEKLVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEK 460
           +   M L V   L K
Sbjct: 364 TNEIMRLIVARNLLK 378


>gi|152984346|ref|YP_001350116.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150959504|gb|ABR81529.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 387

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 141/388 (36%), Gaps = 25/388 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD+    P    ++R +   G            +   +             
Sbjct: 22  HELAPKAADWDRDHHFPV--DVIRAAAEQGYLGLYIAEEDGGLGLSRLSTSLIFEQLAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +     +S    +A M+A      + + W P +   E             +     LTE
Sbjct: 80  CVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGE-------------LLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G   +   L  
Sbjct: 127 PDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCFLVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y R ++K+G R+  T  + F          +     G V  MK L    L+ A
Sbjct: 186 ADAPGIRYGRNEDKMGWRAQPTRTITFDGVRIPAGNRIGPEGQGFVYAMKGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  +    A+  D
Sbjct: 246 SCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLGAHRLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A +   + K +       V  EA++  GG GY+ +  + R  R++  + 
Sbjct: 306 RGD------AEATLYCAMAKRFATDRCFYVCNEALQLHGGYGYLNDYPLERWVRDTRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           IL G+   M + V   L +   + ++L 
Sbjct: 360 ILEGTNEIMRVIVARRLLEQGGMLDRLL 387


>gi|197313734|ref|NP_861433.2| acyl-CoA dehydrogenase family member 9, mitochondrial [Rattus
           norvegicus]
 gi|171847104|gb|AAI62016.1| Acad9 protein [Rattus norvegicus]
          Length = 625

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/531 (17%), Positives = 183/531 (34%), Gaps = 67/531 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
              +  FP V  +EL  + ++V       L +  N              + D+    PA 
Sbjct: 54  QKGVFPFPEVSQEELSEINQFVG-----PLEKFFNEEV--------DSRKIDQEGKIPA- 99

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L +    GL        +  +        R   +  M       L +        + 
Sbjct: 100 -DTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGII 158

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L+        + PK+ S E+                  LTE   G+D A+I ++     D
Sbjct: 159 LVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDAASIQTRATLSED 205

Query: 224 GIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             Y  L+G K W  +  +++ F + A+      +G +   +    + +    G+   + +
Sbjct: 206 KKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKM-TAFIVERDFGGITNGKPE 264

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS---- 331
           +K+G R + T E+ F NT   +   L  V  G    M I   L+S   S+          
Sbjct: 265 DKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRFSMGSAVAGMLKK 321

Query: 332 -LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + +   YA  R      L +  +++   A +A       ++++  +   D+        
Sbjct: 322 LIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPD--- 378

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               I A + K +  + A   ++EA++ +GGSGY+++    R  R++    I  G+   +
Sbjct: 379 --CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEIL 436

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            L +    L   G  L  ++      ++ +  + +   LRDS+    +    +       
Sbjct: 437 RLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVDLGLSSNIAVVHP 496

Query: 509 ALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           +L  SA                 L R G   + +  +  R  +   + + M
Sbjct: 497 SLGDSANKLEENVHYFGRTVETLLLRFGKTIVEEQLVLKRVANILINLYGM 547


>gi|154248585|ref|YP_001419543.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162670|gb|ABS69886.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 375

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 119/312 (38%), Gaps = 25/312 (8%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    T    + + PK+ S E+               G  LTE + G+D
Sbjct: 85  VAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEW-------------IGGFALTEPQAGSD 131

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A + ++ ++  D  Y LSG K F++S  +    I+ A  +   G   +   +      G
Sbjct: 132 AANLKTRARRDGD-QYILSGAKQFITSGKNGNVVIVFAVTDPDAGKKGISAFIVPTDTPG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R++ K+G  S+ T +L F++        LG                 +  A   V 
Sbjct: 191 YEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGGRIGIASQCVG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +   A  YA  R   G  +++   +   +AD+A  IAAA  +    A   +  +  
Sbjct: 251 MARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHAAALREAGQPC 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA+ A       K +  +MA  V + A++  GG GY+ +    R YR+     I  G+
Sbjct: 311 LTEASMA-------KLFASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIYEGT 363

Query: 447 GNAMVLDVLNLL 458
            +   + +   L
Sbjct: 364 SDVQRIVIARGL 375


>gi|148261178|ref|YP_001235305.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|326404583|ref|YP_004284665.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|146402859|gb|ABQ31386.1| isovaleryl-CoA dehydrogenase [Acidiphilium cryptum JF-5]
 gi|325051445|dbj|BAJ81783.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 390

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 139/364 (38%), Gaps = 24/364 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           H L  +    GL        +        AH +    +   +        + S    + +
Sbjct: 47  HDLWSKMGDIGLLGITVPEQYGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQI 106

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    + + P + S                   L ++E   G+D+ ++  + +K  
Sbjct: 107 RLNGTEAQRERYLPDLVSG-------------RKVGALAMSEPNAGSDVVSMRLRAEKRG 153

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +         W  + P +D  ++ A+ +   G   +   L + +  G    +  +K+G R
Sbjct: 154 NSYVLNGSKMWITNGPEADTLVVYAKTDPESGPRGITAFLVEKTMPGFSCAQKLDKLGMR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYA 339
            + T EL F +        L      V  +   +  + A+++   +  M+ +L   I Y 
Sbjct: 214 GSNTGELVFEDCVVPESNVLGGVGRGVNVLMSGLDYERAVLAAGPLGIMQSALDIVIPYV 273

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD+ + ++AA A  + +A + D  ++  ++AA A      
Sbjct: 274 HEREQFGQKIGEFQLIQGKLADMYVTMSAARAYVYAVAKACDRGRTTRKDAAGA------ 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              +  + A  +  EA++C+GG+GYI + +  R  R++    I  G+     + +   L 
Sbjct: 328 -ILYAAEKATWMALEAIQCLGGNGYINDYATGRLLRDAKLYEIGAGTSEIRRMLIGRELF 386

Query: 460 KGTN 463
           + T 
Sbjct: 387 RETA 390


>gi|295695701|ref|YP_003588939.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411303|gb|ADG05795.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 594

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 161/433 (37%), Gaps = 37/433 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL+++   GL  +     +  +   +                A    +        +   
Sbjct: 65  LLKKAGELGLLGADVPEEYGGLGLDKISSTLITEYVTYGGAFALSHGAHVGIGTLPIVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + + PK+ S E+                  LTE   G+D     +     ++G 
Sbjct: 125 GNKAQKEKYLPKLASGEW-------------LSAYALTEPTSGSDALGAKTTAVLNAEGT 171

Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+++   +D FI+ A+V+G          + +    G+     + K+G + 
Sbjct: 172 HYILNGTKQFITNAGFADLFIVYAKVDGEK----FTAFIVERGFPGVSTGPEEKKMGIKG 227

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T +L   +    +   L  +  G +    IL       A   V   +++LA +  YA+
Sbjct: 228 SSTRQLILEDVPVPVENVLGQIGKGHLIAFNILNIGRYKLAAGCVGSSKIALAMSAKYAK 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--------SEEAAY 392
            R   G  + + P+++  +A +A+   AA ++ +R    FD               +AA 
Sbjct: 288 ERSQFGKPIAEFPLIQNKLATMAVRTFAAESVIYRTVGLFDRQLQDFDLTQDEVGMQAAA 347

Query: 393 ARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A         I K +  ++  AV  E ++  GG G+I E    R YR+S  N I  G+  
Sbjct: 348 AIGEYALECSINKVFGSEVLDAVADENVQIHGGYGFIAEYGAERIYRDSRINRIFEGTNE 407

Query: 449 AMVLDVLNLLEKGTNLFEQ-LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
              + +  +L +     E  L    +Q  G      +T + D       ++GL     +K
Sbjct: 408 INRMLIPGMLMRKVMKGELPLLQKAQQLQGELMSGTVTGVED-GGFLGVERGLIEQ-AKK 465

Query: 508 IALASSAAALYRA 520
           I L ++  A+ + 
Sbjct: 466 IFLLAAGTAVQKY 478


>gi|86750378|ref|YP_486874.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86573406|gb|ABD07963.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 379

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 144/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD+    P    L  ++   GL    +   +      Q   I A +    A    
Sbjct: 28  PYATEWDEAGGFP--RELYEKAAAIGLLGLGFPEEYGGTPTDQFMWIVATQELARAGAGG 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++     A  +A   TP +     P I +                   L +TE  G
Sbjct: 86  VSASLNSHSIGAPPIARAGTPELKARVLPDILAG-------------KKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTSAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGEGPGGVSLLLIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL   +LK K+G  ++ T  L F N        L     G +  M       L  A   
Sbjct: 192 PGLTRTQLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGFMIIMMNFNSERLTMAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  +V L EA  YA++R   G  L    V++  + D+A  IAA+ A+   LA   ++ +
Sbjct: 251 IAASKVCLDEATAYAKQRVTFGKPLTKHQVIRHKLVDMAQRIAASQAMLELLAWRVEQGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   E    +  A  T  +C        +EA++  GG+G++    + R YRE   N+I  
Sbjct: 311 SPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGFMRGVKVERIYREVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|299068201|emb|CBJ39420.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum CMR15]
          Length = 376

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 139/394 (35%), Gaps = 31/394 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE+ R A     +  A  P    WD+    P    + R+    G +      ++      
Sbjct: 7   QEMIRDAIRTFVR-EAIAPHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEAYGGAGLD 63

Query: 131 QAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                               ++S  +    SM+         + W              A
Sbjct: 64  YLSLALILEEIAAGDGGTSTVISVNNCPVCSMLMAYADEAQKQRWL-------------A 110

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+ +  +     LTE   G+D AA+ +   +  +        ++  S   +D  I++A  
Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGERWVLNGVKQFITSGKHADVAIVMAVT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   L   +  G    RL++K+G  S+ T ++   +        L  +    
Sbjct: 171 DKAAGKRGISAFLVPTATPGYIVARLEDKLGQHSSDTAQIVLEDCRIPADCLLGSAGEGY 230

Query: 310 EDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                L  L+   + ++   V +       A+ YA+ R   G  L     ++  +A++A 
Sbjct: 231 R--MALSGLEGGRIGIAAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMAT 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  A  + +  A+  D  +   +EAA A       K    +MA  V ++A++  GG GY
Sbjct: 289 RIDVARQMVWHAASLKDAGRPCLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGY 341

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +  + R YR+     I  G+ +   + +   L
Sbjct: 342 VSDFPVERIYRDVRVCQIYEGTSDIQKILIARAL 375


>gi|254562420|ref|YP_003069515.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
 gi|254269698|emb|CAX25670.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
          Length = 596

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/573 (17%), Positives = 195/573 (34%), Gaps = 71/573 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG--ERWD-KV 97
           LL  ++A                +      E  R+A      L+      G   R D  V
Sbjct: 14  LLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G         F        H +  A    ++       M P +T
Sbjct: 74  VTPKGFKAAYDAYAAGGWMGLSIPEEFGGQGLP--HVLNTAMQEFVSGANLALSMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    +P     + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M     L 
Sbjct: 239 ADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +     +   A+ YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA  L    A + D A    + A          +M P+ K        A   EA +  GG
Sbjct: 359 AARTLMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GY+EE  +++  R++    I  G+     +D++   L + G        + ++  +   
Sbjct: 419 HGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDH 478

Query: 480 G-----KKVITILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRAGMNDIADVFL 530
           G     K  +  L+ +++     +    +L +        A +AA      +  +   ++
Sbjct: 479 GEDEGMKPFVAPLQPALNDL---QAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYM 535

Query: 531 ENRFLDN--CHSTHCMLHGRFNAAHIIDSLYLD 561
             +                R +A  ++   +++
Sbjct: 536 WAKIAGAALAKKAEGADVERMDAKLVLGRFFME 568


>gi|23500935|ref|NP_697062.1| isovaleryl-CoA dehydrogenase [Brucella suis 1330]
 gi|254690335|ref|ZP_05153589.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254694824|ref|ZP_05156652.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254696452|ref|ZP_05158280.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700836|ref|ZP_05162664.1| isovaleryl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|254705202|ref|ZP_05167030.1| isovaleryl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254707278|ref|ZP_05169106.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254709180|ref|ZP_05170991.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254713396|ref|ZP_05175207.1| isovaleryl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254716247|ref|ZP_05178058.1| isovaleryl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256030704|ref|ZP_05444318.1| isovaleryl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256060163|ref|ZP_05450345.1| isovaleryl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256112526|ref|ZP_05453447.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256158707|ref|ZP_05456586.1| isovaleryl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256254109|ref|ZP_05459645.1| isovaleryl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|256258589|ref|ZP_05464125.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260169607|ref|ZP_05756418.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261215151|ref|ZP_05929432.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|261218023|ref|ZP_05932304.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261321128|ref|ZP_05960325.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|23346789|gb|AAN28977.1| isovaleryl-CoA dehydrogenase [Brucella suis 1330]
 gi|260916758|gb|EEX83619.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|260923112|gb|EEX89680.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261293818|gb|EEX97314.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|326408030|gb|ADZ65095.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326537748|gb|ADZ85963.1| isovaleryl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 382

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|77454839|ref|YP_345707.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|77019839|dbj|BAE46215.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 381

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 124/359 (34%), Gaps = 24/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R+   GL C      +       AH+             +      +   A  + 
Sbjct: 43  RDLWNRAGAVGLLCLSIPEEYGGGGGTFAHEAILIEEQARVGDSSWGASLHNGIVAHYLL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W PK+ S E             V   + +TE   G+D+  I ++  +  +
Sbjct: 103 AYGTEDQKQQWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAIRQGE 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +   +D  + +A+ +       +  +L   +  G    R+  KIG + 
Sbjct: 150 EYVVSGSKTFITNGSQADLVLTVAKTDPDDKAAGISLMLVPTAAEGFSRGRVLEKIGMKG 209

Query: 284 NATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL F N        L      G ++ M+ L    L  A+ +V+ M + L E + Y 
Sbjct: 210 QDTSELFFDNVRVPATSLLGHTEGQGFIQLMEQLPQERLLVAVSNVAAMELCLTETLRYV 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  +      K  +A++A +   A A         DE      +       A +
Sbjct: 270 RDRSAFGRPIWGFQNTKFKMAEVATEARVARAFV-------DECIELHLDGELDIPTAAM 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K WC + A  V    ++  GG GY+ E  IAR + +   + I  GS   M   +   L
Sbjct: 323 AKLWCSERAQRVADACLQLHGGYGYMNEYPIARAWADLRVSQIYAGSSEIMKEIISRSL 381


>gi|85710278|ref|ZP_01041343.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           NAP1]
 gi|85688988|gb|EAQ28992.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           NAP1]
          Length = 387

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                 +   GL        +        H I          ++       +      + 
Sbjct: 48  REFWNEAGQAGLLGVSVPEEYGGHGGDFRHDIVVIDQQAKHNVDGFAASLHNTIILPYLV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E             +   + +TE   G+D+ +IT+   K  +
Sbjct: 108 RYGTEEQKQKYLPKLVTGE-------------LVSAIAMTEPGVGSDLQSITTTALKDGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNR 282
           G        +  +   +D  +++A+         +   LLE     G    R  +KIG  
Sbjct: 155 GYRINGSKTYISNGQTADFIVVVAKTNPEERAKGISLMLLETEGAEGFQRGRKLDKIGLD 214

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +  T EL F N F      L G+       +        L  A+ + +G+  +L   + Y
Sbjct: 215 AADTSELFFDNVFVPAENVLGGEEGKGFYQLMGELAQERLVIAMGAATGIEKALETTLDY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D    +  +AD+     AA            + +     AA A     
Sbjct: 275 VKERKAFGQTIWDFQNTQFVLADLKARGTAARVFVNDCIAKLLKGELDVATAAMA----- 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KYW  ++   V+ + ++  GG+GYI +  IA+ YR++    I  GS   M + +   +
Sbjct: 330 --KYWVTELQSEVVDKCLQLHGGAGYINDYPIAKMYRDARITRIFGGSNEVMKMLIARSM 387


>gi|296216692|ref|XP_002754679.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 415

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCAWMIDSFGNEEQRHRFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKRQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGSGPKGISCIVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPMANRIGSEGQGFLIAMKGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + A+  +    A +  + +
Sbjct: 285 LGAAHASIILTRDHLNVRKQFGEPLASSQYLQFKLADMATRLVASRLMIRNAAVALQDDR 344

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  +  + K +      A+  +A++  GG GY+++ +I ++ R+S  + IL 
Sbjct: 345 KD------AVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAIQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRMLISRSLLQ 414


>gi|149927468|ref|ZP_01915722.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149823741|gb|EDM82967.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 372

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 134/390 (34%), Gaps = 37/390 (9%)

Query: 84  LHAYGPGGERWDKVEFHPAWH----------ALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           L  Y     R+ + E  P  H           L  ++   GL  +     +        H
Sbjct: 5   LELYRSNVRRFVETEIKPNQHKWAKQQHVDRELWNKAGEMGLLSADIPEEYGGAGGDFTH 64

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                   L    +    +     +A  +    T    + + PK+ S E           
Sbjct: 65  MAVLFE-ELAYSGDRSFGVHVHAIAAQYILNHGTEEQKQYFLPKMASGEM---------- 113

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + ++E   G+D+  I +   K  +  Y ++G K F+S+   +D  I++ + +  
Sbjct: 114 ---IGAIAMSEPGAGSDLQGIRTSAVKDGNH-YVVNGSKIFISNGYLADVIILVTKTDPS 169

Query: 253 VGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
            G      LL E     G    R+  K+G +   T EL F N        L     G ++
Sbjct: 170 AGAKGTTLLLLETKKAEGFKVGRILEKLGQKGQDTCELFFDNVRIPTQNVLGAEGMGFMQ 229

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M  L    L   + +++ + +++   + Y + R   G  + +    +  +A++      
Sbjct: 230 LMVELPYERLMLGVGAMAAIEMAIEITLEYTKERKAFGKSIFEFQNTRFKMAELKSQAVV 289

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A         D +  +          A I K    ++   VI E ++  GG GY+ E 
Sbjct: 290 ARAF-------IDNSIEKLVAGKLDAATASIAKLHLSELECKVIDECLQFFGGYGYMMEY 342

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            IA+ Y ++    I  GS   M   +   L
Sbjct: 343 PIAQMYADARVQRIYGGSSEIMKEIIARSL 372


>gi|254250777|ref|ZP_04944096.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124879911|gb|EAY67267.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 596

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 100/507 (19%), Positives = 192/507 (37%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPAEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+  + +  AR L
Sbjct: 475 ALGKLDGA---AAASMKAQLEKGARSL 498


>gi|226954432|ref|ZP_03824896.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834781|gb|EEH67164.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 600

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 88/541 (16%), Positives = 179/541 (33%), Gaps = 64/541 (11%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A    N  +P   +    G  W D V   P  +    ++ I  G     
Sbjct: 37  RELVDQYLEAAADFCENELSPINQSGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 96

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            +  +       +     + +   A    G     S  +   +    +      + P + 
Sbjct: 97  AEEQYGGQGLPVSLGNVISEMVGTANWAWGMYPGLSHGAVRTLEHHGSDEQKSTYLPNLV 156

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I ++ +  SDG Y ++G K F+S+  
Sbjct: 157 SGVWTGT-------------MCLTESHAGSDLGIIRTKAEPQSDGSYAITGEKIFISAGE 203

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       I+LA++ G       +  F+VP+   +     G  N +    +++K+G   
Sbjct: 204 HDMAENIVHIVLARLPGAPKGTKGISLFIVPKFNVNADGSLGERNAVRCGSIEHKMGIHG 263

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  ++    S   A+ YA+ R 
Sbjct: 264 NATCVINFDKAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRL 323

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++  +           AL   L+   D  +  + E  
Sbjct: 324 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVHLLSLHADIVEQGATEED 383

Query: 392 Y------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    ++ PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 384 RKFSDNILSLLTPIAKAFLTETGYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEG 443

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           +     LD+L   +L+    + +     + + +     K    +++ ++           
Sbjct: 444 TTEIQALDLLGRKVLQTQGAMLKDFTKIIHKFV--EANKDNAAMQEFVAPLAAANKEWGD 501

Query: 504 LTEKIAL--------ASSAAALYRAGMNDIADVFLENRFL--DNCHSTHCMLHGRFNAAH 553
           +T +I +          +AA  Y      +   +L  R                 F  A 
Sbjct: 502 ITMQIGMRAMQNPDEVGAAAVDYMYFSGYVTLAYLWARMALVAQEKLAEGTTDVDFYNAK 561

Query: 554 I 554
           I
Sbjct: 562 I 562


>gi|307293387|ref|ZP_07573233.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881453|gb|EFN12669.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 381

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 142/377 (37%), Gaps = 28/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P     D  ++ P    L       GLH    D +   +       + A      A 
Sbjct: 26  RIAPLAAEIDAKDWFPG--ELWPEMGALGLHGVTVDEADGGLGLGYLEHVVAQEEVARAS 83

Query: 146 LEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              G    + S    + +    TP     + PK+ S E+                L ++E
Sbjct: 84  ASIGLSYGAHSNLCVNQIRRWATPEQKARYLPKLISGEH-------------VGSLAMSE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  ++  +D  ++ A+     G   +   L +
Sbjct: 131 AGAGSDVVSMKLRAEKRGDRYVLNGTKFWITNATYADTLVVYAKT--GEGARGITAFLIE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        +    G V  +   +  + A++S
Sbjct: 189 KGFKGFSIGQKIDKVGMRGSPTAELVFDDCEVPEENIMGPLNGGVGVLMSGLDYERAVLS 248

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  +   + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D
Sbjct: 249 GIQLGIMQACMDVVLPYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+   +AA A ++A        + A  V  EA++ +GG+GY ++  + R+ R++    
Sbjct: 309 RGKTTRFDAAGAILLA-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLD 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 362 IGAGTNEIRRMLIGREL 378


>gi|229591979|ref|YP_002874098.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363845|emb|CAY51303.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 382

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 148/364 (40%), Gaps = 28/364 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E+W++ E  P    L  ++   G+    +  +             AA   LM     G +
Sbjct: 32  EQWEEAESFP--RELYLKAGAAGILGIGYPEALGGSHEGDLFAKVAASEELMRCGSGGVV 89

Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                    +  V     P V +  AP++ S E               I L +TE  GG+
Sbjct: 90  AGLGSLDIGLPPVVKWARPEVRERVAPQVLSGE-------------KIIALAVTEPGGGS 136

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A++ +   +  D  Y +SG K F++S +   F  +A   G  G   +  LL +    G
Sbjct: 137 DVASLQTHATRDGDH-YRVSGSKTFITSGIRADFYTVAVRTGGPGFAGISLLLIEKDTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               +   K+G  ++ T EL F +     G L+G  N+    +        L  A+M+  
Sbjct: 196 FSVGQPLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANM 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +++L E++ +A +R   G  +    V+K  +A++A  +  +   ++R A       S 
Sbjct: 256 TAQMALEESLKWAAQREAFGKPIGKFQVLKHRLAEMATAVEVSREFTYRQAAKMAAGISV 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E + A+ +A          A  V  +A++ +GG GY+    + R YR++   SI  G+
Sbjct: 316 IKEISMAKNLA-------TDTADRVTYDAVQILGGQGYMRGSLVERLYRDNRILSIGGGT 368

Query: 447 GNAM 450
              M
Sbjct: 369 REVM 372


>gi|224368000|ref|YP_002602163.1| Acd2 [Desulfobacterium autotrophicum HRM2]
 gi|223690716|gb|ACN13999.1| Acd2 [Desulfobacterium autotrophicum HRM2]
          Length = 603

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/506 (18%), Positives = 186/506 (36%), Gaps = 60/506 (11%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
             D +L  +++      H++ +   +  +     E   +A     P        G   + 
Sbjct: 10  DQDFVLHEMLSVADLAKHEDFQDFNKKTVDMVITEARNLAIKEVLPTQKEGDEHGCTLNN 69

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV     +    +            D  +      +   I A  ++  A          
Sbjct: 70  GKVTIPECFRKPFKLFCEGEWIAMCDDPEYGGQGMPKVLSIAAGEMFTGANCAFMMYPGL 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  +V    +    K +   +++ ++  T             + LTE   G+D+ A+
Sbjct: 130 THGAGKIVEEFGSEAQKKKYLKNLYTGKWAGT-------------MCLTEPEAGSDVGAL 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+  +K  DG Y ++G+K F+S    D        +LA++EG       +  FLVP+   
Sbjct: 177 TTTAKKNDDGTYSIAGNKIFISGGDHDLTENIIHPVLARIEGAPAGTKGISLFLVPKFKI 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    L+ K+G   NAT  L F    N  G L+G+ N     +  M   
Sbjct: 237 NDDGTPGESNDVVCTGLEEKMGIHGNATAALAFGSKGNCIGELIGEENKGMRAMFIMMNE 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-------SGG-----ILIDQPVMKRAIADIA 363
             L   +        S   +++YA+ R                  +I+ P +KR +  + 
Sbjct: 297 ARLGVGMQGFGFATTSYINSVNYAKERVQGVNLMNMFDADPKPVAIINHPDVKRQLLSMK 356

Query: 364 LDIAAATALSFRLANSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            ++     L +     FD+AK+ +      +      ++ P+ K +C   +  V A+ ++
Sbjct: 357 ANVDGMRTLLYYTGFLFDKAKTAATPEEKEKWEGLIELLTPVVKSYCTDRSFEVCAQGIQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
             GG G+I+E    +  R+    SI  G+     +D+L   L  K    F  L   + + 
Sbjct: 417 IYGGYGFIKEYPQEQLLRDCKITSIYEGTNGIQAMDLLGRKLGLKKGKPFMDLLGEMNKT 476

Query: 476 LGSS-----GKKVITILRDSISLCKE 496
           + ++      + +  IL+++I+   E
Sbjct: 477 VAAAKEIEGLEAMADILQNAINKLGE 502


>gi|149375956|ref|ZP_01893723.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359836|gb|EDM48293.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 383

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 134/375 (35%), Gaps = 29/375 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  E W+     P    L     + G+ C      +        + +            
Sbjct: 26  TPHYEAWEHSGIVP--RELWDTLGNAGMLCVDVPEDWGGCGAPFQYSVVVGEEMARMGFG 83

Query: 148 AGH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           A    +M  S   A  ++ +      + W PK+ S E                 + +TE 
Sbjct: 84  ALSTNVMVHSDIVAPYLSHIGNEEQRQYWLPKMVSGE-------------AVGAIAMTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ AI +   K  D  Y L+G K F+++   +D  I+ A+ + + G   +   L D
Sbjct: 131 GAGSDLQAIRTSAVKDGDD-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVD 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            S  G    R  +KIG  S  T EL FS+        L     G +  M+ L    L   
Sbjct: 190 TSLPGYSKGRNLDKIGQHSGDTSELFFSDMRIPASALLGEEGQGFMYLMRELPRERLVIG 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + V+  R +L   I+YA+ R + G  L      +  IA +  D     A         D
Sbjct: 250 ALGVAAARGALDLTINYAQERELFGQKLAQLQNTRFEIARMETDCRVNRAFV-------D 302

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E  +  E+       A + KY   +M   V    ++  GG GY  E  I+R + ++    
Sbjct: 303 ECIALYEKGELDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTSEYPISRAFIDARVQR 362

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M   +  
Sbjct: 363 IYGGTSEVMKEIIAR 377


>gi|228993736|ref|ZP_04153641.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
 gi|228999779|ref|ZP_04159353.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|228759986|gb|EEM08958.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|228765947|gb|EEM14596.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
          Length = 608

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/439 (19%), Positives = 161/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKISSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKQYLPPLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+V+G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKVDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FTAFIVEKEYPGVSTSPEEKKMGIKCSSTRTLILEDALVPKENVLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + +L  +  YA +R      +   P+++  +A++A  I AA + 
Sbjct: 276 LNIGRYKLGVGTVGSSKRALEISAQYANQRQQFKQPIARFPLIQEKLANMAAKIYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++   V+ E ++  G
Sbjct: 336 VYRTVGLFESHMSTLTEEQVKDGKAVAASIAEYAIECSLNKVFGSEVLDYVVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|90420133|ref|ZP_01228041.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335467|gb|EAS49217.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 598

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/527 (17%), Positives = 194/527 (36%), Gaps = 79/527 (14%)

Query: 44  VALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHP 101
             L+    P ++   LE  G +      +E+A +A+            G    D V   P
Sbjct: 25  QGLLGELTPDLLDAVLEEAGRFAG----EEIAPLADVG-------DREGTSVKDGVVTTP 73

Query: 102 -AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             W AL       G +       +       +  + AA   +      G  + P++T  +
Sbjct: 74  TGWKALYENWSAGGWNALTGPEEYGGQGLPTS--LSAAVFEMWNSASMGFAIGPTLTVGA 131

Query: 161 MVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           + AL    +  +   +  K+ +  +  T             + LTE + G+D++A+ ++ 
Sbjct: 132 VEALEAHGSDELKATYLEKLVTGAWMGT-------------MNLTEPQAGSDLSALKTKA 178

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
           ++  DG Y + G K +++    D       ++LA++         +  FLVP+ L +   
Sbjct: 179 ERADDGSYRIFGQKIYITYGEHDFTDNIVHLVLARLPDAPAGVKGISLFLVPKFLVNQDG 238

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMK 313
             G  N      +++K+G   + T  + + +           G+L+G+ N     +  M 
Sbjct: 239 SLGRRNDAFCHSVEHKLGIHGSPTCTMIYGDGSVDGEEAGAVGYLIGEENRGLACMFTMM 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------------ILIDQPVMKRAI 359
               L   +  +     +  +A+ YAR R                    ++D P + R +
Sbjct: 299 NNARLLVGVQGIGVAEAAFQKALDYARERRQGRATRLAKNPEAGGQMSPILDHPDVARML 358

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMAPITKYWCCKMAPAVI 412
             +     A  A+++   ++ D AK+   +A         A ++ PI K +   +   V 
Sbjct: 359 LTMKSLTGAVRAITYACGHATDMAKAHRGDAEASAAWKERANLLTPIAKAFSTDVGVEVA 418

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFS 470
           +  ++  GG G++EE   AR  R++    I  G+       L    + + G     + F+
Sbjct: 419 SLGIQVHGGMGFVEETGAARLLRDARIAPIYEGTNGIQAIDLVARKIGQSGGEAVRRYFA 478

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
            L++ + +   +       +           R  TE ++ A++A  +
Sbjct: 479 ELDETIEAVRGQNEAAFGATGDALAAAMADLRETTEFLSNATAAKDM 525


>gi|163739914|ref|ZP_02147320.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
 gi|161386788|gb|EDQ11151.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107]
          Length = 592

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/544 (17%), Positives = 194/544 (35%), Gaps = 79/544 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLR 108
            S     LE  G +  +   + L+ +              G R+D  KV    ++     
Sbjct: 40  ASDAEAALEGFGRFC-TEIIEPLSAVG----------DTVGARFDGVKVAMPASFEQAYT 88

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           + +  G            +   +A    A  +   A +  G     +  +   + L  + 
Sbjct: 89  QFVDMGWQSLSHPAEHGGMGLPRAVGAAATEILNAADMSFGLCPLLTDGAIDALLLSGSE 148

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                +   + + ++  T             + LTE + G+D+  +  + ++  DG + +
Sbjct: 149 EQKARYLEPMITGQWSGT-------------MNLTEPQAGSDLGRVRCKAERCDDGSFAI 195

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F++    D       ++LA+          +  F+VP+ +       G+ N +  
Sbjct: 196 TGTKIFITYGEHDLSENIIHLVLARTPDAPAGPKGLSLFIVPKYMVQNDGSLGARNAVNC 255

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G R++ T  LEF    GFL+G+ N     +  M         +  V+    +L
Sbjct: 256 VSIEHKMGVRASPTAVLEFDAAKGFLVGEENRGLEYMFVMMTSARFSVGVQGVAVSERAL 315

Query: 333 AEAIHYARRRHVSGGI----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             A+ +A+ R   G            +   P ++R +  +   +    AL+   A   D 
Sbjct: 316 QHALAFAQERQQ-GRPVDGSTKDAVSINQHPDVRRMLLRMRGMVEGGRALALATAGWLDL 374

Query: 383 AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           A S  E+A A A  + P+ K  C + +  V +  ++  GG G+IEE  +A+  R++    
Sbjct: 375 AHSGDEQANAMAEFLVPLVKGNCSERSVEVTSLGLQIHGGMGFIEETGVAQLCRDARILP 434

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  G+      D+L                + +D G + ++   ++ ++      D   +
Sbjct: 435 IYEGTTAIQANDLLG-------------RKVLRDGGETARRFSALIAETEDQLNSDCPQS 481

Query: 502 RFLTEKIALASSA-----AALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           R + E+++ A +A     + L      D    F              ML G         
Sbjct: 482 RMIAERLSQARTAFDASLSWLLETAPTDPNAAF-------AGGVPFLMLTGNLAVGWQFG 534

Query: 557 SLYL 560
              L
Sbjct: 535 RAAL 538


>gi|112253528|gb|ABI14351.1| acyl-CoA dehydrogenase protein 1 [Pfiesteria piscicida]
          Length = 430

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/355 (18%), Positives = 134/355 (37%), Gaps = 29/355 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA---LMTT 167
             +GL        +  V            +  +A+++    +   + +  ++       T
Sbjct: 95  FENGLMGIEAPAEYGGVGLN--FTAACLAVEEVARVDPAVAVFMDIQNTLLITSFNRYGT 152

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               +++  ++               T       L+E   G+D  A+ +  ++  D    
Sbjct: 153 KEQKENYLTRL--------------ATDTGGSFCLSEPGSGSDAFALKTAARQDGDDWII 198

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +S  +  F++ A  +       +   + +    G+   + ++K+G R+++T 
Sbjct: 199 DGNKCWISNSKEAGLFVVFANADFSKKHRGITAFVVEKDNPGMTIGKKEDKLGIRASSTC 258

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F N       +LG+L         +     +      V   R +   A+ Y R R  
Sbjct: 259 ELNFDNCRVHKSAMLGELGEGYKMAIGLLNEGRIGIGAQMVGLARGAFDYALEYMRTRKQ 318

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   M+   A  A++I AA  L +  A   +  +    EAA A++ A       
Sbjct: 319 FGTAVSDFQGMQFQYARAAMEIEAARVLVYNAARMKEAGQPFVTEAAMAKLKA------- 371

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            ++A  V ++A++ +GG G+ +E    ++YR+S   +I  G+ N  +L +   L 
Sbjct: 372 SEVAQMVSSQAIDWLGGVGFTKEFIAEKYYRDSKIGTIYEGTSNIQLLTIAKALR 426


>gi|269967505|ref|ZP_06181561.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269827887|gb|EEZ82165.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 389

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 139/378 (36%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L       GL     D           AH +    +   
Sbjct: 29  EHIAPIAAEIDRDNQFP--NHLWPLLGEMGLLGVTVDEELGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    TP   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGTPSQREKYLPKLIDGTH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ +   G   +   + 
Sbjct: 134 EPNAGSDVISMQLKAENKGDHFVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + +  G  + +  +K+G R + T EL F++       +LG+LN     +        +  
Sbjct: 194 ERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y   R   G  + +  +++  IAD+   ++AA A  + +A + 
Sbjct: 254 AAGPLGIMQACMDIVVPYVHEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  ++AA A         +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGNATRKDAAGA-------ILYSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|126651843|ref|ZP_01724044.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126591311|gb|EAZ85419.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 552

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 143/369 (38%), Gaps = 31/369 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L +++   GL       ++  + + K    + A ++         + +   V +   V
Sbjct: 51  RQLFQKAGDLGLLAIEIPEAYGGLELHKTISGLVAEKMGFGGSFSVSYNIHAGVGTLPYV 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + PK+ S E+                  LTE   G+D     +  +   
Sbjct: 111 -YFGNEEQKLRYLPKLASGEW-------------VGAYALTESDAGSDALRPKTNARLTE 156

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ ++D F++ AQ         +  L+ + S  G+   + + K+G
Sbjct: 157 DGTAWIVNGEKQWITNAQLADVFVVFAQT-----HNGMTALIVERSFKGVSVGQEEEKMG 211

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +    +   L  V  G +  M I  +  L  A  ++   + +   A++
Sbjct: 212 IKGSSTATLILEDVIVPIDHVLGEVGKGHIVAMNILNMARLKLAFSNIGTAKQAFQLAVN 271

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      ++D  +++  +AD+A+ I  A + ++R A   DEA +   +    +   
Sbjct: 272 YGKGRRQFERSIVDFTMIQEKLADMAVLIYGAESAAYRTAGKMDEAIASGSKETMVQKIS 331

Query: 396 ----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K  C +    +  EA++  GG GY++E  + R YR++  + I  G+     
Sbjct: 332 DFALECALHKVHCSEALGKIADEAVQIHGGYGYMQEYDVERLYRDARISRIFEGTNEINR 391

Query: 452 LDVLNLLEK 460
           L +  +L K
Sbjct: 392 LTLAKMLWK 400


>gi|126728635|ref|ZP_01744450.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126710565|gb|EBA09616.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 379

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 134/381 (35%), Gaps = 27/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W+K    P   +L  +    G                +           MA
Sbjct: 22  EHIAPHARTWEKDGTIP--KSLWPQLADLGFGGLYVSEESGGAGLSRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +        PK  S E               +   LTE
Sbjct: 80  CPSVAAFLSIHNMCARMIDSYASDDFKARVLPKALSME-------------TVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++ QK ++G Y L+G K F+S    SDA++ + +  G  G   +  +  
Sbjct: 127 PGSGSDAAALKTRAQKTNEG-YVLNGTKAFISGGGYSDAYVTMVRT-GEDGPKGISTVYI 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +   ++K+G RS  T +++F +       L+G+                L+ 
Sbjct: 185 EDGTPGLSFGAAEDKMGWRSQPTAQVQFDDCTIPHDNLIGEEGKGFRYAMAGLDGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +  S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   
Sbjct: 245 SACSLGAAQTALTLTLQYMSERKAFGQSIDQFQALQFRLADMEIELQAARTFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A     + K +  +     + + ++  GG GY+ +  I +  R+   +
Sbjct: 305 DTGAPD------ATKFCAMAKKFVTEAGSRTVDQCLQLHGGYGYLADYGIEKLVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLLEKG 461
            IL G+   M L     +  G
Sbjct: 359 QILEGTNEIMRLITARHMLAG 379


>gi|17544993|ref|NP_518395.1| acyl CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427283|emb|CAD13802.1| probable acyl coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 376

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 133/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    + R+    G +      ++                        
Sbjct: 24  PHAAAWDRDATFP--KDVHRQLGELGAYGVAVPEAYGGAGLDYLSLALILEEIAAGDGGT 81

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S  +    SM+         + W              AP+ +  +     LTE   
Sbjct: 82  STVISVNNCPVCSMLMAYADEAQKQRWL-------------APLARGEMLGAFCLTEPHV 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D AA+ +   +  +        ++  S   +D  I++A  +   G   +   L   + 
Sbjct: 129 GSDAAALRTTATRDGEHWVLNGVKQFITSGKHADVAIVMAVTDKAAGKRGISAFLVPTAT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G    RL++K+G  S+ T ++   +        L  +         L  L+   + ++ 
Sbjct: 189 PGYIVARLEDKLGQHSSDTAQIVLEDCRIPADCLLGSAGEGYR--MALSGLEGGRIGIAA 246

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +       A+ YA+ R   G  L     ++  +A++A  I  A  + +  A+  D 
Sbjct: 247 QSVGMARAAFEAALAYAKERESFGQPLFAHQAVQFRLAEMATRIDVARQMVWHAASLKDA 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +EAA A       K    +MA  V ++A++  GG GY+ +  + R YR+     I
Sbjct: 307 GRACLKEAAMA-------KLNASEMAERVCSDAIQVFGGYGYVSDFPVERIYRDVRVCQI 359

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   + +   L
Sbjct: 360 YEGTSDIQKILIARAL 375


>gi|94984536|ref|YP_603900.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94554817|gb|ABF44731.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 380

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 141/378 (37%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                 ++     P    LLR++   GL        +  V  +     R A    M +  
Sbjct: 26  ARAHEIEETNRVPP---ELLRQAAELGLFGLSIPEEYGGV--RLGMLGRCAVYEAMGEGH 80

Query: 148 AGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            G     S  ++   S +  + T    + + P++ S E                G  +TE
Sbjct: 81  MGFGGVISAHASIGTSGLVKLGTEEQKRRFLPRMASGEC-------------IAGFAITE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A I ++ +K  D         +  ++P++    ++A  +   G   +   L +
Sbjct: 128 PSSGSDAANIRTKAEKRGDVYVLNGTKHYISNAPIAGLLTVIAITDPSQGTRGMSAFLVE 187

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
             S  G+   ++  K+G +   + E+ F +       LLG  N+       +     +  
Sbjct: 188 PQSTPGVSIGKIDEKMGQKGALSSEVIFQDAEIPAANLLGPENLGYREALGILTNGRVGI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S   M+  L  ++ +A+ R   G  +     ++  +A++ + I  +  L  ++A   
Sbjct: 248 AARSTGAMQRLLDLSVAHAKTREQFGQPIAQFQAVQFMLAEMEVAIQTSRLLWQKVAWMV 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +         R MA + KY   +M   V  +A++  GG GY+++  + R YR+    
Sbjct: 308 DQGQD-------VRRMASVAKYHATEMLSQVADKAVQVAGGMGYMKDSPVERFYRDQRLL 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 RIYEGTSEIQKLIIARSL 378


>gi|306843620|ref|ZP_07476221.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306276311|gb|EFM58011.1| isovaleryl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 392

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWRELGELGVLGVTAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQGKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|158422200|ref|YP_001523492.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158329089|dbj|BAF86574.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 380

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 133/379 (35%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     L+ +   G+               +                 
Sbjct: 25  PHALEWDEAHHFPI--PTLKAAAALGMAGIYVRDDVGGSALSRLDATLIFEALAEGCPAT 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+     P     W PK+ +               +     LTE   G
Sbjct: 83  SAYLSIHNMVAWMIDRFGAPEQRTRWLPKLCAM-------------DIVASYCLTEPGSG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L G K F+S   + D + ++A+  G  G   V  +L +   
Sbjct: 130 SDAAALKTRAARDGDH-YVLHGEKQFISGAGASDLYAVMARTGGE-GPGGVSTILVEAGT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G R   T  + F      +   +G                 L+ A  S
Sbjct: 188 PGLSFGANEKKMGWRVQPTRAVIFDGVRVPVENRIGAEGDGFKFAMAGLDGGRLNIAACS 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L +A+ Y   R   G  +     ++  +AD+  ++  A    +R A++ D + 
Sbjct: 248 LGGAQAALDKALAYTAERKAFGKAINQFQALQFRLADMETELEVARTFLWRAASALDRSD 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +      A  +  + K +       V  EA++  GG GY+ +  + +  R+   + IL 
Sbjct: 308 PK------ATRLCAMAKRFVTDAGFEVANEALQLHGGYGYLADYGVEKIVRDLRVHQILE 361

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+   M + +   L    N
Sbjct: 362 GTNEIMRVIIARGLVARGN 380


>gi|318058207|ref|ZP_07976930.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318078107|ref|ZP_07985439.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 393

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 134/398 (33%), Gaps = 26/398 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS   QE  R A  +  +     P     D+    P  H         GLH       
Sbjct: 16  YELSALHQEF-RAAARDLAR-KELAPRSAEVDERGGFP--HDTYAILTAAGLHAPGIPEE 71

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +            A      A   +  +++ +    + + L  T    + + P++ + E 
Sbjct: 72  YGGDGVDALAAALAVEEVARACASSSTVLTSNKLGVTPLLLHGTEEQKRRYLPEVAAGE- 130

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                         +   ++E+  G+D+ A+  +  +  DG        W  S+ ++   
Sbjct: 131 ------------ALMAYAISEREAGSDVGAMRCRATEDGDGWVLDGVKTWITSAGVARYL 178

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           ++ A  +   G   +   +      G+ Y   + K+G + + T E+ F  T    G LLG
Sbjct: 179 VVFAVTDPGAGSRAISAFVVHADDPGITYGEPERKMGLKGSVTREVYFDRTRLPAGRLLG 238

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +                +     ++   + +L  A+ Y + R   G  + D   ++  +A
Sbjct: 239 ERGRGMRVALGTLDHTRVSIGAQALGIAQGALDCAVDYVKERRQFGQPVADFQGVRFMLA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + +A  L +  A                       K      A AV  +A++ +G
Sbjct: 299 DMAVRVESARQLVYAAAARSASRAPD------LTYFGAAAKCLASDTAMAVTTDAVQLLG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GY  +    R  R++    I  G+     + +   L
Sbjct: 353 GYGYTRDFPAERMMRDAKITQIYEGTNQIQQVVIARQL 390


>gi|94501687|ref|ZP_01308202.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94426174|gb|EAT11167.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 594

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 82/495 (16%), Positives = 173/495 (34%), Gaps = 70/495 (14%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPA 102
                V  +             +E  ++A+     L      G+         +V   P 
Sbjct: 30  RLAEAVDPD-------TADAILEEAGKIASQ---VLAPLNREGDEHSSKWNDGEVTAPPG 79

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    +     G      +  F  +   +    +   +   + +  G     +  +   +
Sbjct: 80  FKEAYQTYCEGGWGGLGGNPEFGGMGMPKMLVGQVEEMVQGSNISFGLAPMLTAGACLSL 139

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +  + + + P ++S ++             +  + LTE   GTD+  I ++ +  +
Sbjct: 140 NAHGSQELKEKYLPNMYSGQW-------------SGAMDLTEPHCGTDLGIIRTKAEPQA 186

Query: 223 DGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y +SG K F++    D       ++LA++         +  FLVP+ L +     G 
Sbjct: 187 DGSYAISGTKIFITWGEHDMAENIIHLVLAKLPDAPAGPKGISLFLVPKYLVNEDGSLGE 246

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N +    +++K+G + +AT  + +    G+L+G++N     +  M     +   I  + 
Sbjct: 247 KNTMGCGSIEHKMGIKGSATCVMNYDGAKGWLVGEVNKGLAAMFTMMNYERVAVGIQGLG 306

Query: 327 GMRVSLAEAIHYARRR--------HVS----GGILIDQPVMKRAIADIALDIAAATALSF 374
               S   A+ YA  R                  +I  P ++R +  +  +   + A S 
Sbjct: 307 VAENSYQNAVLYANDRLQSRAPTGKQFPEKAADPIIVHPDVRRMLMTMRANTEGSRAFST 366

Query: 375 RLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             +   D AK   +E       A   ++ P+ K +   +A     E  +  GG G+I E 
Sbjct: 367 YASRWLDLAKFSEDEDVRKNAEAMVALLTPVVKSFLTDLALESAIEGQQVFGGHGFIREW 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE-----QDLGSSGK 481
              +H R+     I  G+     LD++   +   G   +      ++     Q+      
Sbjct: 427 GQEQHVRDIRITQIYEGTNGIQSLDLIGRKIAANGGASYRIFAEEIQQYIASQEGNDKMA 486

Query: 482 KVITILRDSISLCKE 496
           + I  L+ +I+   E
Sbjct: 487 EFINPLKAAIANLTE 501


>gi|254387179|ref|ZP_05002447.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345992|gb|EDX26958.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 383

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 146/398 (36%), Gaps = 30/398 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   + + R+A   T +     P    WD+ E      A++++    G         + 
Sbjct: 5   LSEEQEAVRRLARAFTEREVV--PYAADWDRAESVD--RAIVKKLGALGFLGLTVPEEYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A+ +    L        G +       A  +A   T    + W P++ S    
Sbjct: 61  GSGGDHLAYVLVTEELGRGDSAVRGIVSVSLGLVAKTIAAWGTEEQKRAWLPRLCSG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                           GLTE   G+D   + ++  +  D  Y LSG K F+++   +D  
Sbjct: 118 ----------DALGCFGLTEPGTGSDAGNLDTRAVRDGDA-YLLSGSKMFITNGTWADVV 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+     G   V   L      GL  + +  K+G R  AT EL            L 
Sbjct: 167 LLFARTSDAPGHRGVSAFLVPTDSPGLTRREIHGKLGLRGQATAELVLDGVRVPASAMLG 226

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    M  L    +  A   V   + +L  A+ YA +R   G  +    +++  IA
Sbjct: 227 PEGKGFSVAMSALAKGRMSVAAGCVGIAQAALDAAVSYAAQREQFGKTIAHHQLVQELIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           DI++D+ AA  L++R+A+  D     + E+          K +  + A    + A++  G
Sbjct: 287 DISVDVDAARLLTWRVADLIDRGLPFATES-------STAKLFASEAAVRAASNALQVHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G GYI+E    +  R++   ++  G+     L +    
Sbjct: 340 GYGYIDEYPAGKLLRDARVMTLYEGTSQIQKLLIGRAR 377


>gi|228991347|ref|ZP_04151304.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228768410|gb|EEM17016.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 571

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 149/402 (37%), Gaps = 39/402 (9%)

Query: 94  WDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEQHNYQVSRGLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHVGVGTLPYI-YYGTNEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPVENVLGEVGKGHYVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIH 331

Query: 386 RS-------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +        + +   +   I K    +    ++ EA++  GG GY++E  + R YR++ 
Sbjct: 332 ETNGDGSIMRKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGYMQEYEVERLYRDAR 391

Query: 439 ANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475
            + I  G+     L V  +L K     G  + E  F  +E++
Sbjct: 392 ISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433


>gi|126736656|ref|ZP_01752395.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126713771|gb|EBA10643.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 387

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 141/399 (35%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +H +      P     D+    P   AL       GL     D   
Sbjct: 7   TFDLGEDVNALRDMVHDWAQTRVKPMAADIDQSNAFP--PALWTEMGELGLLGVTVDEDH 64

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   +    + S    + + L         + P++ S E+
Sbjct: 65  GGAGMSYLAHTVAIEEIARASASVSLSYGAHSNLCVNQIKLNGNDEQKAKYLPRLISGEH 124

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + +K +D         W  + P +D  
Sbjct: 125 -------------VGALAMSEAGAGSDVVSMSLRAEKRNDHYRLNGNKYWITNGPDADTL 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L +    G       +K+G R + T EL F +       +LG
Sbjct: 172 VVYAKTDPDAGSKGITAFLIEKEMTGFSTSPHFDKLGMRGSNTAELVFDDVQVPFDNVLG 231

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A + +  M   L E + Y   R   G  + +  +M+  IA
Sbjct: 232 EEGKGVRVLMSGLDYERVVLAGIGLGIMAACLDEVMPYISTRKQFGEPIGNFQLMQGKIA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + +A A  + +A + D      ++AA           +  + A     +A++ +G
Sbjct: 292 DMYTAMNSARAYVYEVAKACDRGTVTRQDAA-------ACCLYASEEAMKQAHQAVQAMG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+G++ +  +AR +R++    I  G+     + V   L 
Sbjct: 345 GAGFLNDAPVARIFRDAKLMEIGAGTSEIRRMLVGRELM 383


>gi|91076006|ref|XP_966406.1| PREDICTED: similar to acyl-coa dehydrogenase isoform 1 [Tribolium
           castaneum]
 gi|270014595|gb|EFA11043.1| hypothetical protein TcasGA2_TC004634 [Tribolium castaneum]
          Length = 630

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 168/410 (40%), Gaps = 52/410 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L+  P     + P++ S E+                  LTE   G+D  +I ++    
Sbjct: 166 ILLVGNPEQKAKYLPRVTSGEF--------------AAFCLTEPSSGSDAGSIKTRAVLS 211

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
            DG  Y L+G K ++S+   ++   + AQ    + + G  +  V   + + S  G+    
Sbjct: 212 PDGKHYILNGSKIWISNGGLAEIMTVFAQTPVNDPKTGKTVDKVTAFIVERSFGGVTNGP 271

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ + +    +    NV  G     K+ +  L++    ++      M
Sbjct: 272 PEKKMGIKASNTAEVYYEDVKVPV---ENVLGGVGNGFKVAMNILNNGRFGMAAALSGTM 328

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  + +A+ +A +R   G  +     ++  IA +A+      ++++ ++ + D       
Sbjct: 329 RSCIKKAVEFATQRTQFGQRIDSFGAIQEKIARMAMLQYVTESMAYMISGNMDSG----- 383

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            ++   + A I+K +  + A  V  EA++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 384 -SSSYHLEAAISKCFASESAWFVCDEAIQIMGGMGFMKETGLERVLRDLRIFRIFEGTND 442

Query: 449 AMVLDV-LNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLC---------- 494
            + L V L  ++      ++L   F     +LG    +    +  S+ L           
Sbjct: 443 ILRLFVALTGIQYAGAHLKELQNAFKNPAANLGLIFGEASKRVVRSVGLASPPAMDHLVH 502

Query: 495 KEDKGLARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFLDNCHSTH 542
           ++    A  L +KI     A    L + G + + + F+ NR  ++    +
Sbjct: 503 RDLGNAANLLAKKIDAFGQAVEMVLIKYGKSIVNEQFVLNRLANSAIDIY 552


>gi|198274173|ref|ZP_03206705.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135]
 gi|198272848|gb|EDY97117.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135]
          Length = 568

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/458 (19%), Positives = 172/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+     A L   +  GL+     R +  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKANLDAMVKAGLNGMTMPRRYGGLNFPITPYTMCAEIVAQADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDGRGLSMFIYDKNDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L G+  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGERKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            EA+ YA+ R   G  +I+ P +   +A I   + A  AL ++ +   D          E
Sbjct: 309 DEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAYDCIQVHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE----QLFSTLEQDLG--SSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+        +L     +  G  +  K +   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLHEYELIPCAPEFEGYMNRIKDMTRKLEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAG 521
             +  KE +        +R L E  A+   +  L +  
Sbjct: 489 CTNAVKEAQNQELLDLVSRRLYEMAAVCVMSHLLLQDA 526


>gi|73999765|ref|XP_535433.2| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) isoform 1 [Canis familiaris]
          Length = 423

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 61/380 (16%), Positives = 135/380 (35%), Gaps = 28/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLM 143
               P  +  D            ++  + G+        +         ++     +  +
Sbjct: 59  EHLAPQAQEIDHFNEFKNLREFWKQLGNLGVLGITAPAQYGGSGLGYLEQVLVMEEISRV 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SAAVGLSYGAHSNLCLNQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV--GCFLVPR 260
           E   G+D+ ++  + +K  D  Y L+G+K W  + P +D  I+ A+ +  V      +  
Sbjct: 166 EPNAGSDVVSMKLKAEKKGD-YYILNGNKFWITNGPDADILIIYAKTDLAVVPASRGITA 224

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + + +  G    +  +K+G R + T EL F +        L   +  V  +   + L+ 
Sbjct: 225 FIVEKNMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHLSKGVYVLMSGLDLER 284

Query: 321 AIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            ++S   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A
Sbjct: 285 LVLSGGPLGLMQAVLDHTIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVA 344

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D+    +++             +  + A  V  + ++C G +GYI +  + R  R++
Sbjct: 345 KACDQGHCTAKD-------CAGVILYSAECATRVALDGIQCFGANGYINDFPMGRFLRDA 397

Query: 438 PANSILLGSGNAMVLDVLNL 457
               I  G+     L +   
Sbjct: 398 KLYEIGAGTSEVRRLVIGRA 417


>gi|170740707|ref|YP_001769362.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194981|gb|ACA16928.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 380

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 130/379 (34%), Gaps = 25/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+               +             
Sbjct: 23  ERIAPHALAWDAEKHFPV--EVLREAGALGMGGITIREEHGGSGLTRLDAALIFEALATG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S    +  M+    +    + W P +              +        LTE
Sbjct: 81  CPTVSAFLSIHNMATWMIDRFGSEPQRERWLPDLC-------------RAERLAAYCLTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ +  ++  D  Y L G K F+S   +    ++    G  G   +  L+  
Sbjct: 128 PGSGSDAAALRTTARREGDA-YVLDGTKQFISGAGAVDLYVVMVRTGEPGPKGISTLVVP 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               GL +   + K+G  +  T ++ FS         LG+  +             ++  
Sbjct: 187 ADAPGLSFGPNERKMGWNAQPTRQVIFSGCRVPAANRLGEEGIGFKIAMAGLDGGRINIG 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +A+ YAR R   G  L     ++  +AD+A ++ AA  + +  A + D
Sbjct: 247 ACSLGGAQSALDKALTYARERRAFGQRLDAFQALQFRLADMATELEAARLMIYAAAAALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                      A   A + K +       V   A++  GG GY+ E  I +  R+   + 
Sbjct: 307 RGDPD------ATARAAMAKRFATDRGFQVADAALQLHGGYGYLSEYGIEKIVRDLRVHQ 360

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           IL G+   M L V   L +
Sbjct: 361 ILEGTNEIMRLIVARGLVR 379


>gi|321265712|ref|XP_003197572.1| acyl-CoA oxidase [Cryptococcus gattii WM276]
 gi|317464052|gb|ADV25785.1| Acyl-CoA oxidase, putative [Cryptococcus gattii WM276]
          Length = 427

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 127/307 (41%), Gaps = 33/307 (10%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++ L  +P + + W P +               T       L+E   G+D  A+ +  + 
Sbjct: 143 VIRLYGSPEIQQKWLPDL--------------ATCKVGSFCLSEPSAGSDAFALQTTAKL 188

Query: 221 I--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               D         W  +S  ++ F++ A V+   G   +   +      G+   + + K
Sbjct: 189 DSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGITCFIMSKDM-GVEIAKKEAK 247

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE--- 334
           +G R+++T  L F +     +   N+     +  KI I  L+   + ++   + LA+   
Sbjct: 248 LGIRASSTCLLNFDDVK---IPKENIVGEIGKGYKIAIEILNEGRIGIAAQMIGLAQGAF 304

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             ++ YA +R   G  + +   M    A++A +I AA  L++  A   +E +  ++EAA 
Sbjct: 305 DKSLEYAYQRKQFGKPVGEFQGMGFQFAEVATEIEAARLLTYNAARLKEEGRPFTKEAAM 364

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+  A +       +A      A+E  GG G++ E  + +++R+S   +I  G+ N  + 
Sbjct: 365 AKYYASV-------IAQKAAGSAIEWAGGQGFVREVGLEKYWRDSKIGAIYEGTNNIQLD 417

Query: 453 DVLNLLE 459
            +   L 
Sbjct: 418 TIAKFLR 424


>gi|296282193|ref|ZP_06860191.1| isovaleryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 399

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 157/415 (37%), Gaps = 37/415 (8%)

Query: 51  PSVVHKELE-LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           P     E +  LGE       + + R A+     L       E+ D+ ++ P   AL  +
Sbjct: 10  PMRATPEFDFQLGESA-EMIRESVGRFADEQIAPL------AEKIDREDWFPK-DALWAQ 61

Query: 110 SIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               GLH    D     +      H I    +   +        + S    + +      
Sbjct: 62  MGELGLHGITVDPEDGGLGLGYLEHVIAVEEVSRASASLGLSYGAHSNLCINQIRRWGNE 121

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                + P + S E+                L ++E   G+D+ ++  +   +  G    
Sbjct: 122 EQKAKYLPGLISGEH-------------VGSLAMSEASAGSDVVSMKLKADAVDGGYRLN 168

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  ++P +D  ++ A+ +   G   +   L +    G    +   K+G R + T E
Sbjct: 169 GTKFWITNAPYADTLVVYAKTDSEAGSRGITAFLIEKGDEGFSIGQKIEKVGMRGSPTAE 228

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRH 343
           L F + F     D  +         ++  LD   + ++G+++ + +A       Y R R 
Sbjct: 229 LVFDDCFVPE--DRVMGPVGGGVGVLMSGLDYERVVLAGLQLGIMQACLDTVIPYLRERT 286

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +M+  +AD+ + + +A A ++ +A S D  K+   +AA A ++A      
Sbjct: 287 QFGKPIGSFQLMQAKVADMYVALQSARAYTYAVAKSCDANKTTRFDAAGAILLA------ 340

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A  V AE+++ +GG+GY  +  + R+ R++    I  G+     + +   L
Sbjct: 341 -SENAFRVAAESVQALGGAGYTLDWPVERYMRDAKLLDIGAGTNEIRRMLIGREL 394


>gi|260907092|ref|ZP_05915414.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 388

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 140/375 (37%), Gaps = 33/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD     P    +++RS   G+               +            A    
Sbjct: 34  PHALEWDAEHHFPV--DVIKRSADLGMGGIYVSEEAGGTGMGRMDAALIFEAMSTACPSV 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+         + +   + S ++                  LTE   G
Sbjct: 92  AAYISIHNMVAWMIDKYGDAAQKEKYLSPLVSMDH-------------LGSYCLTEPNAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ +  ++  D  Y L+G K F+S    S+ ++++A+  G+ G   +   + +   
Sbjct: 139 SDAAALRTSAREDGD-SYVLNGVKQFISGAGTSETYLVMAR-SGQDGSRGISAFILEKGM 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G R+  T ++   N         N+   P +  KI +       L+  
Sbjct: 197 EGLSFGPNEQKMGWRAQPTRQVIMENVRVP---KENLLGEPGQGFKIAMSGLDGGRLNIG 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L +AI Y   R   G  L     ++  +A++   + AA +L +R A+++D
Sbjct: 254 ACSLGGGQSALEKAIDYMGERQAFGTELSAFQALRFEVAEMQTKLEAARSLLWRAASAYD 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +       +++ + K         V   A++  GG GY+ E  I +  R+   + 
Sbjct: 314 SGDPNT------SLLSAMAKLTATDSGFDVANRALQLHGGYGYLTEYGIEKLVRDLRVHQ 367

Query: 442 ILLGSGNAMVLDVLN 456
           IL G+   M + +  
Sbjct: 368 ILEGTNEIMRVIISR 382


>gi|315043194|ref|XP_003170973.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311344762|gb|EFR03965.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 435

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 136/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 74  EEIGPKVREMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 131

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 132 DPSVSVMVDVHNTLVNTAVLKHGSAAIKKRWLPRL--------------ATDTVGSFCLS 177

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 178 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIV 237

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 238 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 294

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    +IAAA AL F  
Sbjct: 295 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNA 354

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V + A+E +GG G++ E    + +R+
Sbjct: 355 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSSLAVEWMGGMGFVREGIAEKMFRD 407

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 408 SKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|304382787|ref|ZP_07365271.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973]
 gi|304336106|gb|EFM02352.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973]
          Length = 574

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 92/434 (21%), Positives = 168/434 (38%), Gaps = 45/434 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +  L  +   GL      R +  +         A+ +   A     ++ S        + 
Sbjct: 92  YENLDATRKAGLWGISMPRRYGGLNLPITPYSIASEIVAAADASFQNIWS-LQDCIETLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
              +    + + P++ + E               + + LTE   G+D+ ++  +      
Sbjct: 151 EFGSEEQRQKYIPRVCAGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG + L+G K F+++  SD  ++LA+ E G      +   + D +  G+  + +++K+G 
Sbjct: 197 DGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDRNQGGVDVRHIEHKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L G   +     V  +     L  A  SV   + +  EA+ YAR
Sbjct: 257 HGSPTCELVYKNAKAELCGSTRMGLIKYVMALMNGARLGIAAQSVGVSQAAYDEALAYAR 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEA 390
            R   G  +I    +   +A +   + A  +L ++ A   D          E K   EE 
Sbjct: 317 ERKQFGTPIIAMAPVYDMLAVMKAKLDAGRSLLYQTARYVDLYKAFDDIARERKLTPEEK 376

Query: 391 A-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A        A    P+ K    + A     +A++  GGSG+I E    R YR++   SI 
Sbjct: 377 AEQKRYTRLADAFTPLAKGMNSEYANQNAYDAIQVHGGSGFIMEYKCQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-------KVITILRDSISLCKE 496
            G+    V+  +  +  GT     +   L  D+  + K       K+  +LR++I   KE
Sbjct: 437 EGTTQLQVVAAIRYITNGTYTAM-IDEMLAGDVADAMKPLKARTEKLAAMLREAIDKVKE 495

Query: 497 --DKGLARFLTEKI 508
             D+ L  FL  ++
Sbjct: 496 AGDQELQDFLARRL 509


>gi|170741462|ref|YP_001770117.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195736|gb|ACA17683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 597

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/513 (18%), Positives = 179/513 (34%), Gaps = 59/513 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLH-AYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            V+     E A++       L+      G       +V     +          G +   
Sbjct: 36  DVVEAILNEGAKLCEEVLAPLNLPGDAEGCTRHPDGRVTTPKGFKEAYEAYAGGGWNGLS 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               +                   A +  G     +  + + + +  T    + + P++ 
Sbjct: 96  MPSEYGGQGLPATLNSVVQEFISSANIAFGMYPGLTQGAMAALLVHGTDAQKRTYLPRMI 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
              +  T             + LTE   GTD+  + ++     DG Y L+G K F+S+  
Sbjct: 156 EGSWTGT-------------MNLTEPHCGTDLGLLKTRAVPNPDGSYSLTGTKIFISAGE 202

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRS 283
            D       ++LA++EG       +  F+VP+LL +G       NG+    +++K+G  +
Sbjct: 203 HDLSENIIHLVLARIEGAPAGTKGISLFVVPKLLVNGDGSLGARNGVSCGSIEHKMGIHA 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + +    G+L+G+ N     +  M     L   I  ++   V+   A+ YA+ R 
Sbjct: 263 NATCVMNYDGAKGWLVGEANRGLNAMFVMMNEARLAVGIQGLALSEVAYQNAVAYAKERL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++R +  I     A  AL    A   D A    + A 
Sbjct: 323 QGRALTGAKAPDKPADPIIVHPDVRRTLLSIRAFNEAGRALVLWTALQADVAHRSGDAAE 382

Query: 392 Y------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +M P+ K        A   +A +  GG GYIEE  +++  R++    I  G
Sbjct: 383 RQAADDHMGLMTPVVKGVLTDRGFANAVDAQQMFGGHGYIEEWGMSQFVRDARIAQIYEG 442

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-KKVITILRDSISLCKEDKGLAR 502
           +     +D++   L   G     +    +E     +G  + +      ++    D   A 
Sbjct: 443 ANGIQAMDLVGRKLPRDGGRAMMRFLQEVEGFCKENGADETLKTYTAPLAKALGDLQKAT 502

Query: 503 FLTEKIAL-----ASSAAALYRAGMNDIADVFL 530
               + A+     A +AA  Y   M  +A  ++
Sbjct: 503 MWLMQNAMAKPDNAGAAATDYMHLMGLVALGYM 535


>gi|89902284|ref|YP_524755.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347021|gb|ABD71224.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 598

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/479 (19%), Positives = 173/479 (36%), Gaps = 69/479 (14%)

Query: 68  CTAQELARMA-NYNTPQLHAYGPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +E  + A     P   +    G + D    +V     +     + +  G      D 
Sbjct: 41  AVLEEGGKFAAEVAFPLNQSGDAEGCKLDPVTHEVTTPTGFKEAYAKYVEGGWPALACDT 100

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFS 180
           +F        H +      ++        M P +T  +  AL    T    + +  K+ S
Sbjct: 101 AFGGQGLP--HIVNQCFYEMLNSANQSWTMYPGLTHGAYAALHAHGTEEQKQTYLHKMTS 158

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + S+ +  +DG Y ++G K F+S+  +
Sbjct: 159 GEWLGT-------------MCLTEAHCGTDLGLMRSKAEPQADGTYKITGEKIFISAGEN 205

Query: 241 DA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         V  F+VP+ L       G+ NG+    L++K+G   N
Sbjct: 206 DMASNIIHLVLARLPDAPVGIKGVSLFIVPKFLVKQDGSLGARNGIYCGGLEHKMGICGN 265

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT +L      G ++G  N     +  M     L     S+    V+   A+ YA+ R  
Sbjct: 266 ATAQLVLDGAVGTMVGQPNKGMQAMFVMMNAARLGVGNQSLGQTEVAYQNALAYAKERIQ 325

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSR 386
                           +I  P +++ +           AL    A      +S  + K R
Sbjct: 326 MRSLTGVKAKDKPADPIIVHPDVRKMLLTAKAYAEGGRALLCYSAMLLEKEHSHPDEKVR 385

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +      ++ PI K +            M+  GG GYI++  + +  R++  N I  G+
Sbjct: 386 KDAGELLAMLTPIVKAFITDNGHISTNACMQVFGGHGYIKDWGMEQFARDNRINMIYEGT 445

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
                LD+L     G N             G++ +K   ++   ++    ++ +A F+T
Sbjct: 446 NTVQSLDLLGRKILGNN-------------GATLRKFGKLVGQLVAEEGVNEKMAEFIT 491


>gi|148548899|ref|YP_001269001.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512957|gb|ABQ79817.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 591

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/483 (18%), Positives = 169/483 (34%), Gaps = 49/483 (10%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            L    L    +E AR        L+      G +W   +V          R+ +  G  
Sbjct: 30  ELDRDTLDGILEEAARFTGQIIAPLNRNSDEQGCQWVGGEVTTPDGMRDAYRQYVEHGWA 89

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                +++      Q        + + A L        +  +   +    +  + + +  
Sbjct: 90  SMTGPQAYGGQGLPQMASASFHEMLMAASLSFRIYSGLTEGAVLALHRHGSEPLKQAYLS 149

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S E+  T             + LTE + GTD+A + ++ Q  +DG Y ++G K F+S
Sbjct: 150 RMVSGEWAGT-------------MCLTEPQAGTDLALLRTRAQPEADGSYRITGSKIFIS 196

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
               D       ++LA++         +  FLVP+LL  G  N L    L++K+G +  +
Sbjct: 197 GGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGGERNALGCGALEHKMGIKGAS 256

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + F    G+L+G+ N     +  M         +  +     +    + YAR R  S
Sbjct: 257 TCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQS 316

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RS 387
                          +I  P ++R +            L    A   D   +      R 
Sbjct: 317 RSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQ 376

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             A  A ++ PI K +   +   V +  ++  GG GYI E  + +  R+S    +  G+ 
Sbjct: 377 AAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTN 436

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARF 503
               LD++   +L  G      L   +       ++   +  +        +E + LA  
Sbjct: 437 GIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANARDGLQAMATAVGQRLEEWRVLAAH 496

Query: 504 LTE 506
           + E
Sbjct: 497 VVE 499


>gi|125978457|ref|XP_001353261.1| GA11516 [Drosophila pseudoobscura pseudoobscura]
 gi|195160203|ref|XP_002020965.1| GL25095 [Drosophila persimilis]
 gi|54642015|gb|EAL30764.1| GA11516 [Drosophila pseudoobscura pseudoobscura]
 gi|194118078|gb|EDW40121.1| GL25095 [Drosophila persimilis]
          Length = 419

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/439 (16%), Positives = 146/439 (33%), Gaps = 48/439 (10%)

Query: 41  SLLVALIANFPSVVH-KELELLG-EYVLSCTAQELARMANYNT-----PQLHAYGPGGER 93
             L  L+++  S     ++   G  + L+    +L  MA   T     P    Y   G  
Sbjct: 10  PALRQLVSHSRSYAAVSQVSPNGTSFALTEEQLQLQEMARKFTREEIIPVAAQYDKTG-- 67

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
               E+      +++++   GL  +        +          A             + 
Sbjct: 68  ----EYP---WPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLTAEELAYGCTGIMTALE 120

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    + V L       K +  ++              +  +    G+TE   G+D+  
Sbjct: 121 ASGLGQTPVILSGNKEQKKKYLGRLL-------------EEPLVAAYGVTEPGAGSDVNG 167

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGL 270
           I ++ +K  D         W  +  +++ + +LA+      C         + +    GL
Sbjct: 168 IKTRAEKKGDEYIINGQKMWITNGGVANWYFVLARTNPDPKCPSSKAFTGFIVERDSPGL 227

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
              R +  +G R++ T  + F +         NV  G     KI +          A  +
Sbjct: 228 TPGRKELNMGQRASDTRGITFEDVRVP---KENVLIGEGAGFKIAMGTFDKTRPPVAAGA 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   +  L EA+ Y+  R   G  +     ++  +AD+A+ +  +       A   D+ +
Sbjct: 285 VGLAQRCLDEALKYSLERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGR 344

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S         A I K     MA  + ++A++  GG+G+  E  + +  R++    I  
Sbjct: 345 RNS-------YYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYE 397

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     L +   + +   
Sbjct: 398 GTSQIQRLIISRNMYEAAK 416


>gi|260429527|ref|ZP_05783504.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45]
 gi|260420150|gb|EEX13403.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45]
          Length = 568

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/469 (19%), Positives = 177/469 (37%), Gaps = 42/469 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++    E  +M +     L         R +   V   P +    +     G      D 
Sbjct: 39  VTAVLTEAGKMCDEVMAPLQRNGDLHPARLENGVVRSSPGFAEGYKAISDGGWVAITADP 98

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFS 180
            +  +       I  A   +M+       ++P +T   + AL    +  +   + PK+ S
Sbjct: 99  EYGGMGLPV--VISTAVNEMMSGACLSLQLNPLLTQGQIEALEHHASDEIKALYLPKLIS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+ A++S+     DG Y ++G K F+S   +
Sbjct: 157 GEWSGT-------------MNLTEPQAGSDVGALSSRADDNGDGTYAITGQKIFISWGDA 203

Query: 241 DA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++ G       +  F+VP+ + D     G  N L    L++K+G   +
Sbjct: 204 DFVENVCHLVLARLPGAPAGTKGISLFMVPKFIPDAAGNPGVANSLKVVSLEHKMGLHGS 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  + +    G+++G        +  M     L      V     +   A+ +A  R  
Sbjct: 264 PTCVMSYEGATGWMIGAPGSGMKAMFTMMNNARLGVGGQGVGAAEGAYQHALAFANERKQ 323

Query: 345 SGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPI 399
                  +I    ++R +A +  +I AA A++   A S D  ++  E    A A  + PI
Sbjct: 324 GKSPFDTIIGHADVRRMLATMKAEIFAARAIALDCAISIDMGRATGEAEWDARAAFLTPI 383

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458
            K +   +   V    ++  GG GY+EE   A+ YR+    +I  G+     +D++   L
Sbjct: 384 AKAFGTDIGCEVSEMGVQVHGGMGYVEESGAAQFYRDVRVTAIYEGTNGIQAMDMVGRKL 443

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             G     +L   +E D  ++   +  +        +  +    +L  +
Sbjct: 444 MDGGEAAARLLDEIEADAEAAKGALPELAGAVWEAAETLRETTEWLVAQ 492


>gi|302546947|ref|ZP_07299289.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464565|gb|EFL27658.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 381

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 135/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ +  PA   L  ++   GL      + +  +       +R +          
Sbjct: 23  PRENEIEEKDEIPA--DLRDKAAAMGLFGYALPQEYGGLGLSMTQDVRLSLEIGYTTPSF 80

Query: 149 GHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + S +   +  ++A   T    + + P++ S E             +     LTE   
Sbjct: 81  RSMFSINNGVAGQLLAGTGTEEQKRRYLPRMASGE-------------LIAAFTLTEAEA 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D + I ++  +  D        ++  ++P++  FI+ A+   +  G   +     D  
Sbjct: 128 GSDPSGIRTRAVRDGDVYVLNGSKRFITNAPLAGVFIVFARTGPQSTGPGGISVFAVDAD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKILIY--LDSAI 322
             G+      +K+G     + E+ F +               G    M+ L    L  A 
Sbjct: 188 TPGVTVGPPDHKMGQSGALSAEVFFDDVRVPASALVGEREEEGFHVAMRSLARGRLSVAA 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M V   R  L E++ +A      G  + +  +++  +A+   ++ AA A+    A ++D 
Sbjct: 248 MCVGLARRMLDESVAHASVSRQGGRPIGEYQLVQAMLAESHAELYAARAMVLEAARAYDS 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            + R              K +C +MA  V   A++  GG GY+    + R YR+     I
Sbjct: 308 GEDRRLA-------PSSAKLFCSEMAGRVADRAVQIHGGMGYMRHVPVERFYRDVRLFRI 360

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 361 YEGTSEIQKLIIGRQLLR 378


>gi|218531501|ref|YP_002422317.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523804|gb|ACK84389.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 596

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 109/561 (19%), Positives = 193/561 (34%), Gaps = 84/561 (14%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG--ERWD-KV 97
           LL  ++A                +      E  R+A      L+      G   R D  V
Sbjct: 14  LLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G         F        H +  A    ++       M P +T
Sbjct: 74  VTPKGFKAAYDAYAAGGWMGLSIPEEFGGQGLP--HVLNTAMQEFVSGANLALSMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    +P     + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M     L 
Sbjct: 239 ADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +     +   A+ YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    A + D A    + A          +M P+ K        A   EA +  GG
Sbjct: 359 AARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GY+EE  +++  R++    I  G+     +D++                L +D G +  
Sbjct: 419 HGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKDGGRAMM 465

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFLDNCH 539
             +T ++  I    ED+G+  F+          A   L  A M  + + F +    DN  
Sbjct: 466 AFLTEVQTFIKDHGEDEGMKPFVA-----PLQPALNDLQAAVMWLMQNAFSK---PDNAG 517

Query: 540 STHCMLHGRFNAAHIIDSLYL 560
                     +  H++  + L
Sbjct: 518 ------AAATDLMHLLGQVVL 532


>gi|228997424|ref|ZP_04157043.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229005069|ref|ZP_04162793.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228756171|gb|EEM05492.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228762300|gb|EEM11227.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17]
          Length = 571

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 150/402 (37%), Gaps = 39/402 (9%)

Query: 94  WDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGH 150
            + +E H       L  ++   GL        +      +A     A     A       
Sbjct: 51  IENIEQHNYQVSRGLFEKAGELGLLSIEVPEEYGGFELGKAVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + + PKI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTNEQKEKYLPKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      +G         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSIGLEEKKMGIKGSSTATLILEDVVIPVENVLGEVGKGHYVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   DEA  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIH 331

Query: 386 RS-------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +       ++ +   +   I K    +    ++ EA++  GG GY++E  + R YR++ 
Sbjct: 332 ETNGDGSIMQKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGYMQEYEVERLYRDAR 391

Query: 439 ANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475
            + I  G+     L V  +L K     G  + E  F  +E++
Sbjct: 392 ISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433


>gi|170735260|ref|YP_001774374.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821298|gb|ACA95879.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 596

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 100/507 (19%), Positives = 192/507 (37%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFCGE---VLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPAEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+  + +  AR L
Sbjct: 475 ALGKLDGA---AAASMKVQLEKGARSL 498


>gi|78224498|ref|YP_386245.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78195753|gb|ABB33520.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 380

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/404 (19%), Positives = 151/404 (37%), Gaps = 36/404 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +++ T ++ AR      P   +    GE   +V         L      GL   ++   
Sbjct: 9   RIVTETIRQAAR--ERIAPAAASVDATGELDGEV---------LSLLWDLGLMTLVFPPE 57

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F    + Q   +  A   +     +  LM       S   L               SRE 
Sbjct: 58  FGGAEQSQGTLLCTAVEEIARHCASSSLMLIIQAVGSFPLLHGG------------SREL 105

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDA 242
                  + +        ++E   G+D+ +I +   +  +  Y +SG K F  + P++  
Sbjct: 106 LERVLPRIVERRELAAYLVSEPGAGSDVGSIRTTAVRDGNE-YVISGTKCFSTNGPVASY 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + +LA+     G   +   L DG   GL   +++ K+G R + T E+         G LL
Sbjct: 165 YTVLARTS-ENGRNGLSFFLVDGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+ N           +        ++     +  + + ++R R   G  L +  ++++ I
Sbjct: 224 GEENKGFLLAMKDFDMSRPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQII 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD A  I AA  L +R A  +D+ K  ++       +A + K +    A  +  +A++  
Sbjct: 284 ADSATKIEAARGLIYRAAALYDQGKRNTK-------LASMGKLFASDAAMQITTDAIQVF 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GG GY+++  + R +R++    I  G+     L +   + K   
Sbjct: 337 GGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILKEAA 380


>gi|50084855|ref|YP_046365.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|15812037|gb|AAC37155.2| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530831|emb|CAG68543.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 600

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 74/452 (16%), Positives = 162/452 (35%), Gaps = 52/452 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            V++   +  A         L+      G  +++  V     +    ++    G      
Sbjct: 38  DVVNQYLEVAADFCENEIAPLNQNGDQEGCHFEQGKVTTPRGFKEAHQKYAELGFTSLTA 97

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D  +         +I  + +   +          S  +   +    T +  + +  K+ +
Sbjct: 98  DPKYGGQGMPTLLRIAISEMLCGSNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVA 157

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   G+D+  I ++ +  +DG Y ++G K F+S+   
Sbjct: 158 GIWTGT-------------MCLTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEH 204

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+   D        N +    +++K+G   N
Sbjct: 205 DLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDEFGHLLERNHVVCSAIEHKMGIHGN 264

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    GFL+G  N     +        + +A+  ++  +++   A+ YAR R  
Sbjct: 265 ATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASQIAFQGALEYARDRLA 324

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++  +           AL++ LA   D      + + +
Sbjct: 325 MRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQK 384

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    + PI K +  +         ++  GG G+I E  + +  R++  +++  G+
Sbjct: 385 QASDELLAFLTPIAKAFLTESGNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGT 444

Query: 447 GNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
                LD+L   +L+    L + +   ++Q +
Sbjct: 445 TEIQSLDLLARKVLKSEGKLLKNMTDLIDQFI 476


>gi|311105565|ref|YP_003978418.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760254|gb|ADP15703.1| acyl-CoA dehydrogenase, middle domain protein 6 [Achromobacter
           xylosoxidans A8]
          Length = 589

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 96/486 (19%), Positives = 183/486 (37%), Gaps = 53/486 (10%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E AR  A+   P  H        W    V   P +          G         +
Sbjct: 39  AVLEESARYTADVLAPLNHPADREPSSWRDGAVTTSPGFKQAFNLYAEAGWQGMTHPVEY 98

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                        + +   A L        +  +   +    +P + + +   + S  + 
Sbjct: 99  GGQGLPGLIGSPCSEMLNAANLSFALCPLLTNGAIEALLTAGSPELKQRFIEPMISGRWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + G+D+A + S+ Q + DG Y +SG K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLAMVRSRAQPVGDGTYRISGTKIFITYGEHDLAE 205

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ L +     G+ N +    +++K+G +++ T  
Sbjct: 206 NILHLVLARLPDAPEGVKGISLFLVPKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTCT 265

Query: 289 LEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +  G   +L+G  N     +  M         +  V+    +   A+ YA  R  S
Sbjct: 266 LQFGDAGGALGYLVGQENRGLDAMFIMMNAARYAVGVQGVAVADRAHQHALAYAAERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                       +I  P ++R +  +     A  AL++  A   D+A +  +  A  R +
Sbjct: 326 RPVDGSSKDAVPIIQHPDVRRMLGTMRALTEAGRALAYYTAGHADQAHANPDAEARKRHL 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K WC +M+  V +  ++  GG G+IEE   A++YR++   +I  G+    
Sbjct: 386 AVQEYLVPIVKGWCTEMSIDVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQ 445

Query: 451 V--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK-GLARFLTEK 507
              L     L  G  +   L + + +   +   +     R  ++  ++ +  LA  +   
Sbjct: 446 ANDLVGRKTLRDGGAVARALLAEVGKTEAALEARSEPAARLMLTPLRQARAALADAIDFV 505

Query: 508 IALASS 513
           +A A+S
Sbjct: 506 LANAAS 511


>gi|228921051|ref|ZP_04084386.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838597|gb|EEM83903.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 569

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 138/374 (36%), Gaps = 30/374 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-LEAGHLMSPSVTSASMV 162
             L  ++   GL        +      +A     A     A        +   V +   +
Sbjct: 63  RQLFEKAGELGLLGIEVPEDYGGFELGKAVSGLVAEKMGYAGAFSVSFNIHAGVGTLPYI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +  KI S E+                  LTE   G+D  +  +      
Sbjct: 123 -YYGTKEQKEKYLSKIASGEW-------------IGAYALTEPNAGSDALSAKTSAVLNE 168

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G         +W  ++ M+D +++ A+    +  F+V R  E     G+     + K+G
Sbjct: 169 EGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-----GVSIGLEEKKMG 223

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +       +LG++        ++     L  A  ++   + ++  ++ 
Sbjct: 224 IKGSSTATLILEDVVIPADNVLGEVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSVQ 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      L+D  +++  IA++ +    A + ++R A   DEA   S+E    ++  
Sbjct: 284 YGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMSQ 343

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    +    ++ EA++  GG GY++E  + R YR++  + I  G+     L
Sbjct: 344 FAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINRL 403

Query: 453 DVLNLLEKGTNLFE 466
            V  +L K     E
Sbjct: 404 TVAKMLMKQIEQLE 417


>gi|91976675|ref|YP_569334.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683131|gb|ABE39433.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 379

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 141/374 (37%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD+    P    L  ++   GL    +   +      Q   I A +    A    
Sbjct: 28  PYATEWDEAGGFP--RELYEKAAAIGLLGLGFPEEYGGTPTDQFMWIVATQELARAGAGG 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++     A  +A   +  +     P+I S                   L +TE  G
Sbjct: 86  VSASLNSHSIGAPPIARAGSAALKARVLPEILSG-------------KKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + +  ++  D  Y ++G K F++S M   +I  A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTTAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGDGPGGVSLLLIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL    LK K+G  ++ T  L F N        L     G +  M       L  A   
Sbjct: 192 PGLTRTSLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGFMIIMLNFNSERLSMAAGC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  RV L EA  YA+ R   G  L    V++  + D+A  IAA+ A+   LA    + +
Sbjct: 251 IAASRVCLDEASAYAKERVTFGKPLSKHQVIRHKLVDMAQRIAASQAMLELLAWRVQQGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   E    +  A  T  +C        +EA++  GG+G++    + R YRE   N+I  
Sbjct: 311 SPIAEICMLKNQATQTMAFC-------ASEAVQIFGGAGFMRGVKVERIYREVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|226227951|ref|YP_002762057.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091142|dbj|BAH39587.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 596

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/501 (18%), Positives = 186/501 (37%), Gaps = 57/501 (11%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G  +D  +V     +     R   DG      D ++      +  +     L   A 
Sbjct: 61  DAEGVHFDRGEVRTPAGFKEAYARYAADGWTAVAADANYGGQGLPEMTRFVMEELLCSAN 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L        S  + S +    +  + + + PK+    +  T             + LTE 
Sbjct: 121 LSFSMYPGLSHGAYSALISHGSEELKQRFLPKLIDGSWGGT-------------MCLTEA 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVG 254
             GTD+  IT++    +DG Y ++G K F+S+   D       ++LA++         + 
Sbjct: 168 HAGTDLGIITTKAVPAADGTYAITGQKIFISAGEHDLTENIVHLVLARLPDAPSGTKGIS 227

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            FLVP+ L       G+ N +    +++K+G +++AT  L+F N  G+++G+ +     +
Sbjct: 228 LFLVPKFLPTADGGVGARNAVTCGSVEHKMGIKASATCVLDFDNATGWMVGEAHKGMRAM 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M     L   +  +    V+   A+ YA+ R                  ++  P +++
Sbjct: 288 FVMMNSARLAVGLQGLGLSEVAYQNALAYAKERLQGRSLTGPKNAGGVADPILVHPDVRK 347

Query: 358 AIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +  I        +L++       L +   +A  R +     ++M P+ K +        
Sbjct: 348 GLLRIKALNEGMRSLAYAVGIRIDLEHRHPDAAVRQDAEDMVQLMTPVIKAFLTDKGFDN 407

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
              A++ +GG GYI+E  I ++ R++    I  G+     LD++   L  +G  L  + F
Sbjct: 408 TNIALQTLGGHGYIKEYGIEQYVRDARIAQIYEGTNAVQALDLVGRKLPMEGGRLVRRFF 467

Query: 470 STLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL----ASSAAALYRAGMN 523
             ++ D+ ++     +    +       + +     L E+       A +AA  Y   M 
Sbjct: 468 ELVKADVDAAASVDGLEDAAKALGGSLYQLQKATMLLAERGFANPDEAGAAATEYLHLMG 527

Query: 524 DIADVFLENRFLDNCHSTHCM 544
            +A  +   R      +    
Sbjct: 528 YVAVGWQWLRMATVAGAKLAA 548


>gi|326473320|gb|EGD97329.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 435

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 74  EEIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 131

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 132 DPSVSVMVDVHNTLVNTAVLKYGSAAIKKRWLPRL--------------ATDTVGSFCLS 177

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 178 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIV 237

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 238 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 294

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    +IAAA AL F  
Sbjct: 295 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNA 354

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 355 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRD 407

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 408 SKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|83854874|ref|ZP_00948404.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842717|gb|EAP81884.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1]
          Length = 571

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/481 (19%), Positives = 176/481 (36%), Gaps = 42/481 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLRRSIH 112
           +  E   E V     +E  +M N     L   G   P       V   P +    +    
Sbjct: 27  ERFEDASEDVTRAILEEAGKMTNDVLAPLQRAGDQTPAKLENGVVRTSPGFADGFKAVAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D  F  +            +   A L        S      +    +  + +
Sbjct: 87  GGWIGMSADPEFGGMGLPMTLTTAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDAIKE 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+ A+ ++ +   DG Y +SG K
Sbjct: 147 LYLPKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLK 276
            +++   +D       ++LA++ G       +  FLVP+ L +     G+ N L    L+
Sbjct: 194 VYITWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNEDGSLGNANTLNVVSLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   + T  +++    G+L+G        +  M     L      +     +   A+
Sbjct: 254 HKLGIHGSPTCVMQYDKATGWLVGPEQGGMAAMFTMMNNARLGVGGQGIGIAEAAYQHAL 313

Query: 337 HYARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRS 387
            YA  R           G ++D   ++R +  +  +  AA A++   A + D   A  ++
Sbjct: 314 AYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATGQA 373

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E  A A  + PI K +      AV    ++  GG G+IEE   A++ R+    +I  G+ 
Sbjct: 374 EWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTN 433

Query: 448 NAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               +D V   +  G     +L   +E D  ++      +        +  +    +LTE
Sbjct: 434 GIQAMDLVARKMMDGGEAANRLLDEIEADAEAARDVFPNMTDALWQASETLREATDWLTE 493

Query: 507 K 507
           +
Sbjct: 494 Q 494


>gi|326481986|gb|EGE05996.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 435

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 74  EEIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 131

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 132 DPSVSVMVDVHNTLVNTAVLKYGSAAIKKRWLPRL--------------ATDTVGSFCLS 177

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 178 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIV 237

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 238 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 294

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    +IAAA AL F  
Sbjct: 295 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNA 354

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 355 ARKKEVGQDFVQDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRD 407

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 408 SKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|313246358|emb|CBY35274.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 125/366 (34%), Gaps = 27/366 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              DK +  P     L+   + GL+       +                 L  +  A  +
Sbjct: 199 RDIDKNDDFPGLRDFLKTMGNMGLNGPGISEEYGAKDNP-IKSAAIIGEELSRKSAAISM 257

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              +  + ++  L    +      + P + S E                 L +TE   G+
Sbjct: 258 SYGAHNALNVRVLDANGSHEQKLKYLPDLISGE-------------KIGALSMTEPTAGS 304

Query: 210 DIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGS 266
           D+ ++ +          Y L+G+K W  + P+ D  I  A+ +        +   + D  
Sbjct: 305 DVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGDSITAFIVDTD 364

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIM 323
             G     +  K+G R + T +L F N                  +     +  L  A M
Sbjct: 365 TEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFVLMRGLNIERLLGAAM 424

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+  + ++  YA  R   G  +    +M+  +A++   ++A  A ++ +  S D+ 
Sbjct: 425 PVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLSACRAYTYSMLRSADQ- 483

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +  A +         +       V  E ++ +GG+GY+ +  + R+ R++    I 
Sbjct: 484 ----DPEAMSNHECASLIMFVSDACTKVALEGIQILGGNGYVNDYPVNRYMRDAKLMEIG 539

Query: 444 LGSGNA 449
            G+   
Sbjct: 540 AGTTEV 545


>gi|116748841|ref|YP_845528.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697905|gb|ABK17093.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 619

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 97/503 (19%), Positives = 184/503 (36%), Gaps = 74/503 (14%)

Query: 58  LELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDG 114
                  +     ++  ++A N   P        G R++   V+   ++H    R    G
Sbjct: 29  FSEFSRDLSDMILEQAEKLAENEFLPVNRTGDLEGCRFEGGMVKVPESFHRAYARYREGG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
                    +          +  A +   A      LM P +T  S   L    T  + +
Sbjct: 89  WLSLSDSTDYGGQGMP--FVLANACVEYFAAANWALLMYPGLTHGSSRLLEKYGTSELKE 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  K+++ E+  T             + LTE   G+D+  + ++ +++ DG Y + G K
Sbjct: 147 TYLYKMYAGEWSGT-------------MCLTEPDAGSDVGNLRTRAKRLPDGTYSIRGQK 193

Query: 233 WFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE----DGSPNGLCYQRLKN 277
            F+S  M D       ++LA++EG       +  F VPRL      + + N +    L++
Sbjct: 194 IFISCGMHDLTDNIIHMVLARIEGAPKGVRGISIFAVPRLRVTETGELAENDVVCTGLEH 253

Query: 278 KIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G    AT  + F       G+LLG  N     + +M     L + +  +     +   
Sbjct: 254 KLGIHGAATCTMNFGENERCVGYLLGKENTGMRIMFEMMNEARLFTGLQGLGHASAAYLH 313

Query: 335 AIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           A++YA+ R                  +I  P ++R +  +        AL        D 
Sbjct: 314 ALNYAKERRQGALIQHMKHPETPRVPIIRHPDVRRMLMFMKSSTEGLRALMHLGGYCIDR 373

Query: 383 AKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           +++   E        YA ++ P+ K     +   V   A++  GG GY+ E  + +  R+
Sbjct: 374 SRAAEAEEEKELFQGYADLLIPLCKSVGSDLGFRVCETAIQVYGGYGYVTEYPVEQFLRD 433

Query: 437 SPANSILLGSGNAMVLDVLN---------LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
               SI  G+     LD++          L++   N  E + S + ++           L
Sbjct: 434 CKIASIYEGTNGIQALDLVGRKLTYRRGLLVKNALNAIENILSRIRRNF---------SL 484

Query: 488 RDSISLCKEDKGLARFLTEKIAL 510
           RD + + +E +     +T+  AL
Sbjct: 485 RDLVRIYEEAQESTVQVTKFFAL 507


>gi|261404135|ref|YP_003240376.1| acyl-CoA dehydrogenase domain-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261280598|gb|ACX62569.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. Y412MC10]
          Length = 596

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 159/434 (36%), Gaps = 36/434 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     F  +   +                A    +        +  
Sbjct: 68  DLLRKAGELGLLGADVPEPFGGIGLDKVSSTIINENLAKGSSFALSFGAHVGIGTLPIVF 127

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T +  + + P +                +      LTE   G+D     +  +   DG
Sbjct: 128 FGTTKQKQKYLPDL-------------STGAKIAAYCLTEPTSGSDALGAKTTARLSDDG 174

Query: 225 -IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K +  ++  +D FI+ A+++G          + +    G      + K+G +
Sbjct: 175 EYYILNGSKLYITNAGFADIFIVYAKIDGEH----FTAFIVEKEMEGFTLGPEEKKMGIK 230

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L F +       LLG++        ++  +     A  +V   + S+  +  YA
Sbjct: 231 GSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNIGRYKLAAGTVGAAKESIELSAKYA 290

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----------E 389
             R      +   P+M++ +A++ +      ++ +R A   DEA    +           
Sbjct: 291 NTRKQFDTPISQFPLMRKKLAEMNITAFVMESMVYRTAGLLDEAMQDIDYNSEDAGIHSA 350

Query: 390 AAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           AA +       I K +C +    V  EA++  GG GYI+E  + R YR+S  N I  G+ 
Sbjct: 351 AAISDYAIECSINKVFCSEGLDNVADEAVQIHGGYGYIQEYKVERIYRDSRINRIFEGTN 410

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               L +   L K     +   + L++  G  G+ +  +   +     E +     +++K
Sbjct: 411 EINRLLIPGTLVK--KAMKGEIALLQKAQGLQGELLQLVPGQTFEGTLEQEAHFLDMSKK 468

Query: 508 IALASSAAALYRAG 521
           I L +   A+ + G
Sbjct: 469 IFLLAGGMAVQKFG 482


>gi|313106540|ref|ZP_07792768.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310879270|gb|EFQ37864.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 382

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/362 (21%), Positives = 145/362 (40%), Gaps = 24/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++ E  P    L  ++   G+    +  ++            AA   LM        
Sbjct: 32  DEWEEAEEFP--RELYLKAGAAGILGIGYPEAYGGSCEGDLFAKVAASEELM------RC 83

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  + +      +  P V K   P     E        + +    + L +TE  GG+D+
Sbjct: 84  GSGGLVAGLGSLDIGLPPVVKWARP-----EVRERVVPAVLRGEKIMALAVTEPSGGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + ++  +  D  Y +SG K F++S +   +  +A   G  G   +  LL +    G  
Sbjct: 139 ANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAGISLLLVEKGTAGFN 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G  ++ T EL F +       L+G  N     +        L  A+M+    
Sbjct: 198 VGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQSERLALAVMANMTA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +++L E++ +AR R   G  +    V++  +A++A  +  +   ++R A      KS  +
Sbjct: 258 QLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTYRQAAKMAVGKSVIK 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E         + K +   +A  +  +A++ +GG GY+ E  + R YR++   SI  GS  
Sbjct: 318 E-------ISMAKNFATDVADRLTYDAVQVLGGMGYMRESLVERLYRDNRILSIGGGSRE 370

Query: 449 AM 450
            M
Sbjct: 371 IM 372


>gi|311108992|ref|YP_003981845.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763681|gb|ADP19130.1| acyl-CoA dehydrogenase, N-terminal domain protein 22 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 130/380 (34%), Gaps = 31/380 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           QL        R D+V        L+      GL        +          I AA    
Sbjct: 22  QLAPREAEVARLDEVP-----QDLVASMAAQGLFGYSIPEQYGGAGMTTEELILAAMELS 76

Query: 143 MAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
              +     + + +   +  +    T      + P + S E             +     
Sbjct: 77  QCSVAFRARVGTNTGIGSEALVADGTDAQKTRYLPLLASGE-------------LTGCFA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPR 260
           LTE + G+D  A+ +   +  D         +  ++P++  F ++A+ + +  G   +  
Sbjct: 124 LTEPQAGSDATALRTTAVRDGDHYVLNGEKCFITNAPLAGLFTVMARTDPQAPGAKGITA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--I 316
            + +    GL   +  +K+G   +    + F +        +      G    MK+L   
Sbjct: 184 FIVERGTPGLSTGQPYDKMGQAGSPVSSVHFQDCRVPAANIIGGQEGLGFKTAMKVLNKQ 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A + +      L + + +   R   G  L+D  +++  +AD   +I AA AL  + 
Sbjct: 244 RIHLAALCIGPAMRMLDDTLRFVAERQQFGKPLMDFQLIQAMLADCQTEIQAARALVLQT 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D         A   + A I KY+  +M   V    ++  GG GYI +  I R YR+
Sbjct: 304 ARERDAG-------ADVTLNASICKYFASEMCGRVADRCVQMHGGYGYIADHGIERFYRD 356

Query: 437 SPANSILLGSGNAMVLDVLN 456
                +  G+     L++  
Sbjct: 357 VRLFRLYEGTSQIHQLNIAR 376


>gi|311893763|dbj|BAJ26171.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 383

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 132/405 (32%), Gaps = 31/405 (7%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           +L  LGE        E+ R +  +  +     P     D+    PA       +      
Sbjct: 6   DLYRLGEE------HEMLRESVRSLAE-AKIAPFAAVVDEEGRFPAEALEALLAADLHAV 58

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +            +  + + +   +  V L  +  +   +  
Sbjct: 59  HVP--EEYGGAGADALATVLVIEEVARVCASSSLIPAVNKLGSLPVQLAGSEALKAKYL- 115

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                         + +        L+E   G+D A + ++  +  D        +W  +
Sbjct: 116 ------------GALARGEGMFSYCLSEPEAGSDAAGMRTRAVRDGDFWVLDGVKRWITN 163

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           + +S+ + ++A  +       +   + +    G+ +   + K+G + + T E+ F     
Sbjct: 164 AGVSEFYTVMAVTDPSARSRGISAFVVEKGDAGVSFGAPERKLGIKGSPTREVYFDGVRI 223

Query: 297 FLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                +    TG    M+ L    +  A  ++   + +L  A  Y R R   G  + D  
Sbjct: 224 PADRMIGEEGTGFATAMRTLDHTRVTIAAQALGIAQGALDYAKGYVRERRQFGKAIADFQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A+ + AA  L++  A                       K +   +A  V  
Sbjct: 284 GVQFMLADMAMKLEAARQLTYAAAARSQRGDGD------LTFFGAAAKCFASDVAMEVTV 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++ +GG GY  +  + R  R++    I  G+     + +   L
Sbjct: 338 DAVQLLGGYGYTRDYPVERMMRDAKITQIYEGTNQVQRIVMSRNL 382


>gi|297690737|ref|XP_002822765.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           2 [Pongo abelii]
          Length = 414

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 61  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 118

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 119 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 165

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y LSG K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 166 SDAASLLTSAKKQGDH-YILSGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGT 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  +K      ++ A  S
Sbjct: 224 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVKGLNGGRINIASCS 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 284 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMATRLVAARLMIRNAAVAL---- 339

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 340 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 397

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 398 GSNEVMRILISRSLLQ 413


>gi|329927598|ref|ZP_08281761.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5]
 gi|328938387|gb|EGG34777.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5]
          Length = 596

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 157/434 (36%), Gaps = 36/434 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LLR++   GL  +     F  +   +                A    +        +  
Sbjct: 68  DLLRKAGELGLLGADVPEPFGGIGLDKVSSTIINENLAKGSSFALSFGAHVGIGTLPIVF 127

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P +                +      LTE   G+D     +  +   DG
Sbjct: 128 FGTTEQKQKYLPDL-------------STGAKIAAYCLTEPTSGSDALGAKTTARLSDDG 174

Query: 225 -IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K +  ++  +D FI+ A+++G          + +    G      + K+G +
Sbjct: 175 EYYILNGSKLYITNAGFADIFIVYAKIDGEH----FTAFIVEKEMEGFTLGPEEKKMGIK 230

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L F +       LLG++        ++  +     A  +V   + S+  +  YA
Sbjct: 231 GSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNIGRYKLAAGTVGAAKESIELSAKYA 290

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----------E 389
             R      +   P+M++ +A + +      ++ +R A   DEA    +           
Sbjct: 291 NTRKQFDTPISQFPLMRKKLAKMNITAFVMESMVYRTAGLLDEAMQDIDYNSEDAGIHSA 350

Query: 390 AAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           AA +       I K +C +    V  EA++  GG GYI+E  + R YR+S  N I  G+ 
Sbjct: 351 AAISDYAIECSINKVFCSEGLDNVADEAVQIHGGYGYIQEYKVERIYRDSRINRIFEGTN 410

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               L +   L K     +   + L++  G  G+ +  +   +     E +     +++K
Sbjct: 411 EINRLLIPGTLVK--KAMKGEIALLQKAQGLQGELLQLVPGQTFEGTLEQEAHFLDMSKK 468

Query: 508 IALASSAAALYRAG 521
           I L +   A+ + G
Sbjct: 469 IFLLAGGLAVQKFG 482


>gi|300785738|ref|YP_003766029.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795252|gb|ADJ45627.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 380

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 133/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
                ++   GL        F    VR           Y  +      L   +   A  +
Sbjct: 40  REAWLKAGEQGLLGWEVPEEFGGSGVRDFRFNAVLTEEYWASGSVGIGLGLQNDIMAPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +TTP   + W P   S E             +   + ++E   G+D+  + +  ++  
Sbjct: 100 IELTTPEQRRRWLPGFCSGE-------------IITAIAMSEPGAGSDVRGLRTTARREG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y + G K F+S+ + +D  ++  + +   G   +  +  +    G    R  +KIG 
Sbjct: 147 -GEYVIDGTKTFISNGLLADLVMVACKTDPAAGHRGISLIAVEAGTPGFSRGRKLDKIGQ 205

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           RS  T EL F++       L+G+ N     +        L  A+ +V+  + +    + Y
Sbjct: 206 RSADTAELIFTDVRVPVDNLIGEENRGFYHLMRNLPKERLGIAVHAVASAQRAYEITLAY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +    V + A+A++   I        +   + +  +  +EEAA A+    
Sbjct: 266 AGDREAFGQPIGKFQVNRHALAEMRTKIDVMRTYLDQCVLAVNAGELTAEEAAGAKW--- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W  +    ++   ++  GG GY+ E  IAR +R++    +  G+   M   +   +
Sbjct: 323 ----WTTETQWEILDRCLQLHGGYGYVNEYEIARLWRDARVQRLYGGTTEIMKDLIGRSM 378


>gi|282880130|ref|ZP_06288850.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306003|gb|EFA98043.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 575

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 84/432 (19%), Positives = 160/432 (37%), Gaps = 43/432 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++ +   GL      R +  +          + +   A     ++ S        +  
Sbjct: 93  ENIKATRQAGLWGLSMPRRYGGLNLPNVTFSMLSEMIAAADGGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
             T    + + P++                   + + LTE   G+D+  +  +      +
Sbjct: 152 FGTDEQRERFIPRVCEG--------------ATMSMDLTEPDAGSDLQRVMLKATFDEKN 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G  
Sbjct: 198 DCWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRDGGVDVRHIENKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G   +     V  +     L  A  SV   + +  EA+ YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGSTRLGLIKYVMALMNGARLGIAAQSVGVAQEAYNEAVAYAKE 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA 391
           R   G  +I+ P +   ++ +   + A  +L ++ A   D          + K   EE A
Sbjct: 318 RQQFGQPIIEFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIQRDRKLTPEERA 377

Query: 392 -------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +A+   GGSG+I E    R YR++   SI  
Sbjct: 378 EMKKYTRLADAFTPLAKGMNSEYANQNAYDAISVHGGSGFIMEYKCQRLYRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKED- 497
           G+    V+  +  +  GT L       EQ  S     L    + +++   +SI+  K+  
Sbjct: 438 GTTQMQVVAAIRYIMNGTYLNIMREMIEQPVSEALTPLRQKVEAMLSQYEESIAFVKDAN 497

Query: 498 -KGLARFLTEKI 508
            +    FL  ++
Sbjct: 498 CQETQDFLAHRL 509


>gi|194288931|ref|YP_002004838.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG
           19424]
 gi|193222766|emb|CAQ68769.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 594

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/485 (18%), Positives = 183/485 (37%), Gaps = 56/485 (11%)

Query: 66  LSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                 E A+        L+      P   +   V   P +    R+    G    +  +
Sbjct: 37  AEAVLDEAAKFNEQVVAPLNRAGDLDPSSWKDGVVTTTPGFKEAFRQFGEGGWQGVLHPQ 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            F      +   I  A   ++        + P +T  ++ AL+T  +      + PK+ S
Sbjct: 97  EFGGQGLPK--LIATACNEMLNTANLSFALCPLLTDGAIEALLTAGSDAQKATFLPKLIS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F++    
Sbjct: 155 GEWTGT-------------MNLTEPQAGSDLAAVRTRAEPQGDGTYKVFGTKIFITYGEH 201

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+          +  F+VP+ L +     G+ N +    +++K+G +++
Sbjct: 202 DMAQNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGSTGARNDVHCVSIEHKLGIKAS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L+F +     G L+G+ N     +  M         +  ++    +  +A+ YAR 
Sbjct: 262 PTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAYARE 321

Query: 342 RHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
           R  S            +I  P +KR +  +      A A+++  A + D A    +EA  
Sbjct: 322 RVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVR 381

Query: 391 ----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A+   M P+ K W  +++  V +  ++  GG G+IEE   A+HYR++    I  G+
Sbjct: 382 RQSQAFYEFMVPVVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGT 441

Query: 447 GNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                  L     +  G  +   + + + +   + G+          +     +     +
Sbjct: 442 TAIQANDLVGRKTVRDGGAVARAICAQIAETEAALGRHGGAAFTAVQAQLARGRAALEAV 501

Query: 505 TEKIA 509
            E + 
Sbjct: 502 VEFVV 506


>gi|7656849|ref|NP_055199.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Homo
           sapiens]
 gi|26006699|sp|Q9UKU7|ACAD8_HUMAN RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Activator-recruited cofactor 42 kDa component;
           Short=ARC42; AltName: Full=Acyl-CoA dehydrogenase family
           member 8; Short=ACAD-8; Flags: Precursor
 gi|6465955|gb|AAF12736.1|AF126245_1 acyl-Coenzyme A dehydrogenase-8 precursor [Homo sapiens]
 gi|7020392|dbj|BAA91109.1| unnamed protein product [Homo sapiens]
 gi|9739150|gb|AAF97922.1| acyl-CoA dehydrogenase 8 [Homo sapiens]
 gi|119588239|gb|EAW67835.1| acyl-Coenzyme A dehydrogenase family, member 8, isoform CRA_c [Homo
           sapiens]
          Length = 415

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 167 SDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  ++      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 285 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRILISRSLLQ 414


>gi|299768730|ref|YP_003730756.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698818|gb|ADI89383.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 387

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 140/377 (37%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L R++   GL    +   +  +          A + +      
Sbjct: 29  PFVNEWDEAETFP--RELYRKAAEIGLLSLGFSEEYGGIPDADPFYSLLAGIEMAKAGSG 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P I S E                 L +TE  
Sbjct: 87  GVHTSLMVHTIGAPPIQHFGSEELKARVLPGIISGE-------------KISALAITEPG 133

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 134 GGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLVD 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  NV    + +   +      
Sbjct: 193 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVSVSNLLGKENVGFKVIMNNFNMERFFLG 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    
Sbjct: 252 VVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMT 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K +  E         + K    +        A++ +GG G++      R YRE   N 
Sbjct: 312 QPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 369 IGGGAEEIMKDLISKQL 385


>gi|126653094|ref|ZP_01725223.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905]
 gi|126590099|gb|EAZ84224.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905]
          Length = 594

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/459 (19%), Positives = 173/459 (37%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H   H   LL+ +   GL  +     +E +   +      A    +A   +   
Sbjct: 53  VENLEHHEFEHSVRLLKSAGELGLLGADVPEEYEGLGLDKVSSALIAEKMSVAGGFSITH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L       K + PK+ S E             +     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGDEDQKKKYLPKLASGE-------------LIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +    G  Y L+G K W  ++  +D F++ A+++G          + + +  G
Sbjct: 160 LGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDK----FTAFIVERAFKG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G +S++T  L   +    +   L  +  G V    IL        + ++ 
Sbjct: 216 VSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGEIGRGHVIAFNILNIGRYKLGVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           G + +   A+ Y  +R      L D  + K  ++ +A  + A+ +L++R    F+     
Sbjct: 276 GSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGLFEDRLSQ 335

Query: 382 -------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  E K  +   A   I   I K +  +    +  EA++  GG G++ E  + R Y
Sbjct: 336 LSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAEYEVERIY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     + V            L LL+   NL ++L   + +D+G+    
Sbjct: 396 RDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPEDIGTEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                        ++K L +   +KIA+ ++  A  R G
Sbjct: 454 -----------LAQEKYLVKN-AKKIAVLAAGLAAQRFG 480


>gi|302836564|ref|XP_002949842.1| hypothetical protein VOLCADRAFT_59964 [Volvox carteri f.
           nagariensis]
 gi|300264751|gb|EFJ48945.1| hypothetical protein VOLCADRAFT_59964 [Volvox carteri f.
           nagariensis]
          Length = 409

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 132/380 (34%), Gaps = 28/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P  E  D+    P+   L R     GL        +  +    + H I    +   +   
Sbjct: 40  PHAEAIDRDNNFPSSVNLWREMGTFGLLGITAPVEYGGLGLGYSEHCIAMEEISRASGAV 99

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP     + PK+ + E+                L ++E   
Sbjct: 100 GLSYGAHSNLCVNQIVRNATPAQKAKYLPKLITGEH-------------IGALAMSEPGS 146

Query: 208 GTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           G+D+ ++  + +       +         W  + P +D  ++ A+ +   G   +   L 
Sbjct: 147 GSDVVSMQCRAEASQAAGGEAFVLNGNKMWCTNGPKADVLVVYAKTDPAAGPRGITAFLI 206

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    +  +K+G R + T EL F N       +LG +      +        L  
Sbjct: 207 EKGMRGFRTAQKLDKLGMRGSDTCELVFENCEVPAENVLGGVGRGVAVMMSGLDYERLVL 266

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A      M  +L  A+ Y+ +R   G  + +  +++  +AD+   + +A A  + +A   
Sbjct: 267 AAGPCGLMAAALDVALPYSTQRKQFGQPIGEFQLIQAKLADMYTRLQSARAYVYSVAAGA 326

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  ++             +  + A     +A++ +GG+GYI +    R  R++   
Sbjct: 327 DAGVADRKD-------CASVILYAAEAATQSALDAIQILGGNGYINDYPTGRLLRDAKLY 379

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   L K
Sbjct: 380 EIGAGTSEIRRYLIGRELFK 399


>gi|77459090|ref|YP_348596.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77383093|gb|ABA74606.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 383

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           L+ +    GL   +    +            A           G  MS   +      L 
Sbjct: 42  LVAKMGELGLLGMVVPEEWGGTYVDYVAYALAVEEISAGDGATGAFMSIHNSVGCGPVLN 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W   + S              +V     LTE + G++   + ++ + + DG
Sbjct: 102 YGSEEQKQTWLADLASG-------------AVIGCFCLTEPQAGSEAHNLRTRAE-LRDG 147

Query: 225 IYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K F+S+       I+ A  +  +G   +   L      G    R ++K+G R+
Sbjct: 148 QWVINGAKQFVSNGKRAKLAIVFAVTDPDLGKRGISAFLVPTDMPGFIVDRTEHKMGIRA 207

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  +  +N        L     G    +  L    +  A  ++   R +   A+ YAR
Sbjct: 208 SDTCAVTLNNCSIPEANLLGERGKGLAIALSNLEGGRIGIAAQALGIARAAFEAALGYAR 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +++   +   +AD+ + I AA  +    A      K    E       A   
Sbjct: 268 DRVQFGKAIVEHQSIANLLADMQMQINAARLMILHAARLRTAGKPCLSE-------ASQA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  +MA  V + A++  GG GY+E+  + ++YR++    I  GS     + +   L+ 
Sbjct: 321 KLFASEMAEKVCSSAIQIHGGYGYLEDYPVEKYYRDARITQIYEGSSEIQRMVIARELKN 380


>gi|270015759|gb|EFA12207.1| hypothetical protein TcasGA2_TC005123 [Tribolium castaneum]
          Length = 332

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 16/290 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K    E       P   T++     LTE   G+D  A+ +  +K            W  +
Sbjct: 49  KKLGTEEQKKKYLPQLATNMCSSFALTEPSSGSDAFALKTTAKKDGSDFLINGSKMWISN 108

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S ++  F+++A  +   G   +   L +    GL     + K+G  ++ T  L F N   
Sbjct: 109 SDLAGLFLVMANADPSSGYKGITCFLIERDTPGLTVAIPEKKLGLCASGTCMLTFDNVRV 168

Query: 297 FLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILI 350
                  +     +  KI   +L+   + +    V LA+        Y   R   G  + 
Sbjct: 169 PESA---ILGEYGKGYKIAAGFLNEGRVGIGAQMVGLAQGCFDATIPYTLERTQFGKSIF 225

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   M+  IA IA  I +A  L +  A   +      +EAA A+        +   +A  
Sbjct: 226 NFQGMQHQIAQIATQIESARLLVYNAARLVENGHPFIKEAAMAKW-------YSADVAQQ 278

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              + ++ +GG G+ ++    + YR+    SI  G+ N  +  +   L K
Sbjct: 279 TCVKCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYNMQLNTIAKHLAK 328


>gi|170694994|ref|ZP_02886143.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170140092|gb|EDT08271.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 600

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 84/489 (17%), Positives = 171/489 (34%), Gaps = 72/489 (14%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     + A       +G         +       +  +          +  G     S 
Sbjct: 73  VRTPHGYKAAYNLYCKNGWPSLASSPEWGGQGLPPSVALMVREFIASGSMAFGMYAGLSQ 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    T  +   + PK+    +  T             + LTE   G+D++ + +
Sbjct: 133 GAYRAILAHGTDELKATYLPKLVDGSWTGT-------------MCLTEPDSGSDLSRLRT 179

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           + +    G Y ++G K F+S    D       ++LA++         +  F+VP+L+ D 
Sbjct: 180 RAEPDEQGSYRITGTKIFISGGDHDLTENIVHLVLARLPDAPPGTRGISLFVVPKLIPDS 239

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                   S N +    +++K+G R++AT  L F    G+++G  N     +  M     
Sbjct: 240 ATGEVAPDSDNLVSTGAIEHKMGIRASATAVLNFEGARGWMIGQPNGGLRAMFTMMNSSR 299

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALD 365
           +  A+ SV    +S   A+ YA+ R                  +ID P ++RA+  + + 
Sbjct: 300 IGVAVQSVGVSEISYQNALAYAKERRQGKAPGHCGEQRATPDAIIDHPDVRRALLTMKVL 359

Query: 366 IAAATALSFRLANSFD--EAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECI 419
           +    AL    A   D   ++  S E   A      + P+ K +    A  +    ++  
Sbjct: 360 VEGIRALYVESAMLLDVRASQPDSTEGEAAESRLALLTPVLKSFISDCAVQITDLGVQIH 419

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLG 477
           GG GY+ E  +   +R++    +  G+     LD++   +  +   + +   ++ +Q + 
Sbjct: 420 GGYGYVHETGMEHLFRDARIVPLYEGTNGIQALDLVTRKIGLEDGRVLDAWLASTDQVIA 479

Query: 478 SSG------------KKVITILRDSISLCK--------EDKGLARFLTEKIALASSAAAL 517
           S+             ++ +  LRD+    +        +  G A        L +  A  
Sbjct: 480 SASNIEPLSHLVSAQRRAVQHLRDATDALRAWSNGNELDQAGAATDYLRLFGLVAMGAVW 539

Query: 518 YRAGMNDIA 526
            R      A
Sbjct: 540 LRMAEASSA 548


>gi|110633285|ref|YP_673493.1| isovaleryl-CoA dehydrogenase [Mesorhizobium sp. BNC1]
 gi|110284269|gb|ABG62328.1| isovaleryl-CoA dehydrogenase [Chelativorans sp. BNC1]
          Length = 386

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 133/369 (36%), Gaps = 26/369 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
              GP     D+    PA   L +     GL     +  F        AH +    +   
Sbjct: 27  ERIGPIAAEIDRENEFPAH--LWKEMGDLGLLGITVEPEFGGSGLGYLAHVVAMEEISRA 84

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    TP   +++ P + +                   L ++
Sbjct: 85  SASVGLSYGAHSNLCVNQIRRWGTPEQKQNYLPALCAG-------------QTVGALAMS 131

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K +D         W  + P +   ++ A  +  VG   +   + 
Sbjct: 132 ETGAGSDVVSMKLRAEKKNDRFVLNGSKMWITNGPDAGTLVVYATTDLAVGPRGITAFIV 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           + S  G    +  +K+G R + T EL F +        L      VE +   +  +  ++
Sbjct: 192 ERSMPGFSVAQKLDKLGMRGSNTGELVFEDVEVPFENMLGEEGHGVEILMSGLDYERVVL 251

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S   +  M   L   + Y R R   G  +    +++  +AD+   + A  A  + +A + 
Sbjct: 252 SGGPLGIMAACLDATVPYVRERQQFGQPVGSFQLVQGKLADMYTTLNACRAYVYAVAAAC 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++  ++AA           +  + A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 312 DRGETTRKDAAG-------CILYAAERATRMALDAIQLLGGNGYINEFPTGRLLRDAKLY 364

Query: 441 SILLGSGNA 449
            I  G+   
Sbjct: 365 EIGAGTSEI 373


>gi|224026774|ref|ZP_03645140.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM
           18228]
 gi|224020010|gb|EEF78008.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM
           18228]
          Length = 569

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/458 (19%), Positives = 173/458 (37%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+     A L   +  GL+     R +  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKANLDAMVKAGLNGMTMPRRYGGLNFPITPYTMCAEIVAQADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDGRGLSMFIYDKNDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L G+  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGERKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            EA+ YA+ R   G  +I+ P +   +A I   + A  AL ++ +   D          E
Sbjct: 309 DEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAYDCIQVHGGSGFMMEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE----QLFSTLEQDLG--SSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+        +L     +  G  +  K++   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLHEYELIPCAPEFEGYMNRIKEMTRKLEA 488

Query: 490 SISLCKEDKGL------ARFLTEKIALASSAAALYRAG 521
             +  KE +        +R L E  A+   +  L +  
Sbjct: 489 CTNAVKEAQNQELLDLVSRRLYEMAAVCVMSHLLLQDA 526


>gi|330892469|gb|EGH25130.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 503

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/416 (18%), Positives = 152/416 (36%), Gaps = 48/416 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G      +  F  +   +    +   +   A L  G     +  +   +    +  +   
Sbjct: 2   GWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEALKTK 61

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G K 
Sbjct: 62  FLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITGSKI 108

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA++         +  FLVP+ +       G  N +    +++
Sbjct: 109 FITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGSIEH 168

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   A+ 
Sbjct: 169 KMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQSAVE 228

Query: 338 YARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA  R  S               +I  P ++R +  +        A S  +A   D AK 
Sbjct: 229 YALDRLQSRAPTGAQNKDKAADPIIVHPDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKF 288

Query: 386 RSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             ++AA         ++ P+ K +   +         +  GG GYI E    +  R+   
Sbjct: 289 SEDDAARKRADDLVALLTPVAKAFLSDIGLETTVHGQQVFGGHGYIREWGQEQLVRDVRI 348

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
             I  G+     LD++     G+N  F QLFS   +   +     +      ++  
Sbjct: 349 TQIYEGTNGIQALDLVGRKIVGSNGAFYQLFSDEVRQFINGADGALNEFAQPLAKA 404


>gi|186473917|ref|YP_001861259.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184196249|gb|ACC74213.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 377

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 135/376 (35%), Gaps = 34/376 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    PA   ++R+    G    I    +            A           
Sbjct: 26  PNAAQWDREGALPA--QVVRQMGELGFLGMIVPPEWGGSYTDYIAYALALEEIAAGCAAC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   +      L   +      +   + +                     LTE   
Sbjct: 84  ATMMSVHNSVGCGPVLNFGSDAQKDRYLADLATG-------------KRIGAFCLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G++   I ++   + DG + ++G K F+++   +   I+ A  +   G   +   +    
Sbjct: 131 GSEANNIRTRAV-LRDGQWVINGSKQFVTNGSRASIAIVFAVTDPEAGKRGLSAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    R ++K+G R++ T  +   +       + N+   P E ++I L  L+   + +
Sbjct: 190 TPGFNVGRPESKLGIRASDTCPISLDDCAVP---EANLLGAPGEGLRIALSNLEGGRIGI 246

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A A       YA  R   G  L +   +   +AD+A  + AA  L    A   
Sbjct: 247 AAQAIGIARAAFDAARVYANERIQFGKALKEHQTIANMLADMATRLNAARLLVHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +    E       A   K +  +MA  V ++A++  GG GY+E+ ++ RHYR++   
Sbjct: 307 SAGRPCLSE-------ASQAKLYASEMAEEVCSKAIQIHGGYGYLEDYAVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+     + +  
Sbjct: 360 QIYEGTSEVQRMVIAR 375


>gi|109898235|ref|YP_661490.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700516|gb|ABG40436.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 600

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/466 (18%), Positives = 164/466 (35%), Gaps = 61/466 (13%)

Query: 55  HKELELLGEYVLSCTAQELA--RMANYNTPQLHAYGPGGER----WDK-VEFHP-AWHAL 106
            K    LG    S    E      A ++   L      G+     W+  V   P  +   
Sbjct: 22  EKHYADLGFEDASPDMVEAIFSEAAKFSENVLAPLNAVGDDEGCTWENSVVTTPTGFKEA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-- 164
            ++ +  G         F        + + +A    ++       M P ++   M  L  
Sbjct: 82  YQQYVEGGWPSMTHPAEFGGQELP--YSLSSALGEWLSGANHSWAMYPGLSQGCMATLEA 139

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP   K +  K+ +  +  T             + LTE   G+D+  + ++  K  DG
Sbjct: 140 HGTPEQQKMFLHKLVAGTWTGT-------------MCLTEPHCGSDLGMLKTKAVKNDDG 186

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE--DG---SPN 268
            Y L+G K F+S+   D       I++A++         +  F+VP+     DG     N
Sbjct: 187 SYNLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGTKGISLFVVPKFNVSPDGENVDRN 246

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +    +++K+G + +AT  + F    G+L+G  N     +        + + +  ++  
Sbjct: 247 AVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTENRGLNCMFTFMNSARIGTGLEGLASS 306

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
             +   A+ YA+ R                  +I  P ++R +           AL+   
Sbjct: 307 ETAFQGALAYAKDRLQFRSMKGVQNPDGPADPIIVHPDVRRMLLTQKAFAEGNRALAIYA 366

Query: 377 ANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               D      +EA      A    + PI K +  + A    +  M+  GG G+I+E  +
Sbjct: 367 MKLVDITLYSKDEAAKQVSEAKLAFLTPIVKAFLTETAQESTSYGMQVFGGHGFIKEWGM 426

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQ 474
            +  R++   ++  G+     +D+L     G+N  L E     +  
Sbjct: 427 EQLARDTRICTMYEGTTGIQAIDLLARKVVGSNGKLLEVFTQEVRD 472


>gi|194291863|ref|YP_002007770.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225767|emb|CAQ71713.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 367

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 126/380 (33%), Gaps = 39/380 (10%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G   D+V                GL   I    +            A        
Sbjct: 20  QWDRDGRLPDEVV---------AEMGALGLLGMIVPEEWGGTYTDYVAYALAIEEIAAGC 70

Query: 146 LEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                +MS   +     +    T    + +  ++ S E             +     LTE
Sbjct: 71  AACATMMSVHNSVGCGPILHYGTDAQKERYLARLASGE-------------LIGAFCLTE 117

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            + G++   + ++ +   +G       ++  +   +   ++ A  E   G   +   L  
Sbjct: 118 PQAGSEAHNLRTRARFTDNGWVLNGSKQFVTNGQRAGVAVVFAATEPERGKKGISAFLVP 177

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
               G      + K+G R++ T  +   +          +   P E ++I +       +
Sbjct: 178 TGTPGFIVHAPEKKLGIRASDTCAITLEDCVVPHDA---LLGEPGEGLRIALSNLEGGRI 234

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   R +   A  YA  R   G  L + P +   +AD+A ++ AA  L  R A 
Sbjct: 235 GIAAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNAARLLVHRAAR 294

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +      E       A   K +  ++A  V ++A++  GG GY+E+  + RHYR++ 
Sbjct: 295 MRSDGVPCLSE-------ASQAKLYASELAERVCSKALQIHGGYGYLEDYPVERHYRDAR 347

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 348 ITQIYEGTSEIQRMLIARSL 367


>gi|107100206|ref|ZP_01364124.1| hypothetical protein PaerPA_01001229 [Pseudomonas aeruginosa PACS2]
          Length = 387

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/388 (19%), Positives = 139/388 (35%), Gaps = 25/388 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P    WD+    P    ++R +   G            +   +             
Sbjct: 22  HELAPKAADWDRDHHFPV--EVIRAAAEQGYLGLYIAEEDGGLGLSRLSTSLIFEQLAAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +     +S    +A M+A      + + W P +   E                   LTE
Sbjct: 80  CVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGE-------------SLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D A + ++ ++  D  Y L G K F+S   S   +++    G  G   +   L  
Sbjct: 127 PDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCFLVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ Y R ++K+G R+  T  + F          +     G V  MK L    L+ A
Sbjct: 186 ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L +++ Y   R   G  L     ++  +AD+  ++ A+  +    A+  D
Sbjct: 246 SCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLGAHRLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A +   + K +       V  EA++  GG GY+ +  + R  R++  + 
Sbjct: 306 RGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
           IL G+   M +     L +   + ++L 
Sbjct: 360 ILEGTNEIMRVIAARRLLEQGGMLDRLL 387


>gi|93006363|ref|YP_580800.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92394041|gb|ABE75316.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 383

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 126/364 (34%), Gaps = 31/364 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
            AWH     +   G  C+     +        H+         A       M  S   A 
Sbjct: 45  EAWHE----AGDMGFLCASMPEEYGGGGGDFGHEAAILLAQAQANQAGFGGMVHSGIVAP 100

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    K W PK+ + E                 + +TE   G+D+ AI +   K
Sbjct: 101 YILKHGTEEQKKAWLPKLATGE-------------SVGAIAMTEPTTGSDLQAIKTYAVK 147

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNK 278
             D  Y ++G K F+++      I+LA + +   G   V  ++ +     G    R   K
Sbjct: 148 DGDD-YIINGSKTFITNGQHTNLIVLACKTDRDQGAQGVSLIVVETDALEGFSRGRNLKK 206

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            G  S  T EL FSN        L      G ++ M+ L    L  A+     ++++L  
Sbjct: 207 TGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQMMQELPQERLIIALSGCGAIKLALEL 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y + R   G  +      +  +A++  D  A  AL      +               
Sbjct: 267 TLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLAVKALCDSAVEAMING-------TLTA 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + KYW  +    V+ E ++  GG GY+ E  IAR Y ++    I  G+   M    
Sbjct: 320 PQASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIMKELA 379

Query: 455 LNLL 458
              +
Sbjct: 380 SRFM 383


>gi|148547441|ref|YP_001267543.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511499|gb|ABQ78359.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 594

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 175/531 (32%), Gaps = 62/531 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD------KVEFHPAW 103
            S +   L  L E + + TA  +   A+  T QL       G+         +V     +
Sbjct: 26  ASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSRNGDEQGVCFDAGQVTTPEGF 85

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G      +     +   +   +    +   A        + S  S   + 
Sbjct: 86  REAWNTYREGGWVGLGGNPEHGGMGMPKMLGVLFEEMLYAADCSFSLYSALSAGSCLAID 145

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + P ++   +  T             + LTE   GTD+  I ++ +  +D
Sbjct: 146 AHASEALKATYLPPLYEGRWAGT-------------MCLTEPHAGTDLGLIRTRAEPQAD 192

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G   +SG K F++    D       ++LA++         +  FLVP+ L +     G+ 
Sbjct: 193 GSVRISGSKIFITGGEQDLTENIVHLVLAKLPDAPAGAKGISLFLVPKFLVEADSRLGAR 252

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  +  
Sbjct: 253 NAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGC 312

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS-- 373
              S   A  YA  R  S               +I    ++R +  +     A  A +  
Sbjct: 313 AEASYQSAARYANERLQSRAATGPQAHDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVY 372

Query: 374 ----FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                 +A   ++A  R        ++ P+ K +             +  GG GYI E  
Sbjct: 373 VGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWG 432

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD+L   +L  G        S + +            L
Sbjct: 433 QEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEV-RAFSVDAPLHREAL 491

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAA---LYRAGMNDIADVFLENRFL 535
           + S++  +      R    + A   SA A   L   G+   A  ++  R  
Sbjct: 492 QASLARLEATSSWLRAQAGEDANLVSAVAVEYLQLFGLT--AYAYMWARMA 540


>gi|91093613|ref|XP_971884.1| PREDICTED: similar to acyl-CoA dehydrogenase [Tribolium castaneum]
          Length = 395

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 16/290 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K    E       P   T++     LTE   G+D  A+ +  +K            W  +
Sbjct: 112 KKLGTEEQKKKYLPQLATNMCSSFALTEPSSGSDAFALKTTAKKDGSDFLINGSKMWISN 171

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S ++  F+++A  +   G   +   L +    GL     + K+G  ++ T  L F N   
Sbjct: 172 SDLAGLFLVMANADPSSGYKGITCFLIERDTPGLTVAIPEKKLGLCASGTCMLTFDNVRV 231

Query: 297 FLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILI 350
                  +     +  KI   +L+   + +    V LA+        Y   R   G  + 
Sbjct: 232 PESA---ILGEYGKGYKIAAGFLNEGRVGIGAQMVGLAQGCFDATIPYTLERTQFGKSIF 288

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   M+  IA IA  I +A  L +  A   +      +EAA A+        +   +A  
Sbjct: 289 NFQGMQHQIAQIATQIESARLLVYNAARLVENGHPFIKEAAMAKW-------YSADVAQQ 341

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              + ++ +GG G+ ++    + YR+    SI  G+ N  +  +   L K
Sbjct: 342 TCVKCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYNMQLNTIAKHLAK 391


>gi|124265612|ref|YP_001019616.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
 gi|124258387|gb|ABM93381.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium
           petroleiphilum PM1]
          Length = 596

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 100/479 (20%), Positives = 178/479 (37%), Gaps = 63/479 (13%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KVEFHPAWHALLRRSIHD 113
             +    L+   +E  + A   T  L+A     G   D    +V     + A   + +  
Sbjct: 32  AEIDADTLNAVLEEGGKFAAEVTFPLNASGDEQGCTLDKTTHEVTAPKGFKAAYAQYVEG 91

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVH 171
           G      D ++          +      ++        M P +T  +  AL T  T    
Sbjct: 92  GWPALSCDPAYGGQGLPI--VLNQCLYEMLNSANQAWTMYPGLTHGAYEALHTHGTDEQK 149

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S  +  T             + LTE   GTD+  + S+ +  +DG Y ++G 
Sbjct: 150 RTYLPKLTSGHWTGT-------------MCLTEPHCGTDLGLLRSKAEPQADGSYRITGS 196

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+SS   D       ++LA++         +  F+VP+ L       G+ N +    L
Sbjct: 197 KIFISSGEHDLAENIVHLVLARLPDAPQGSKGISLFVVPKFLVQPDGSLGARNPIWCTGL 256

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   NAT ++      G L+G+ +     +  M     L   + S+    V+   A
Sbjct: 257 EHKMGIHGNATAQISLDGAVGTLVGEPHKGLAAMFVMMNAARLGVGMQSLGLTEVAYQNA 316

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R                  +I  P +++ +           ALS   A   D  
Sbjct: 317 VAYAKDRIQMRSLSGPKAPDKPADPIIVHPDVRKMLLTARAYAEGGRALSLYCALLIDRE 376

Query: 384 KSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            S  +EA          ++ PI K +    A    +  ++  GG GYI E  + ++ R++
Sbjct: 377 LSHPDEAVRRDAADQVALLTPIVKAFLTDNAWLATSHCLQVYGGHGYIREWGMEQYVRDA 436

Query: 438 PANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDLG--SSGKKVITILRD 489
             N I  G+     LD+L    L + G  L  F QL     ++ G   + ++ +  L D
Sbjct: 437 RINMIYEGTNTIQSLDLLGRKVLADNGAKLKKFGQLIVDFVEEEGVVEAMQEFVNPLAD 495


>gi|120555716|ref|YP_960067.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325565|gb|ABM19880.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 386

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 143/379 (37%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P  H L ++  + GL        +  +    ++ + AA    MA
Sbjct: 20  KEINPHCDEWEEAGEFP-IHDLFKKLGNLGLLGIQKPEEYGGMGLDYSYNLVAAEELGMA 78

Query: 145 QLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +     L     +      +A   +  + +D+              AP     +   +G+
Sbjct: 79  KCGGVPLAVGVQTDMCTPAIARFGSDELKRDFL-------------APAIAGDMVGCIGV 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D+A + +  +K  D         W  +SP +D   +LA             ++
Sbjct: 126 SEVGAGSDVAGLKTTAKKDGDDYVINGSKMWITNSPKADFMCLLANTSDDKPHKNKTLMI 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
              +  G+ +    NK+G RS+ T ++   +        +    TG +  M       + 
Sbjct: 186 VPMNTPGITFSPHLNKLGMRSSETAQVFLDDVRIPQRNRIGAEGTGFMMQMLQFQEERMW 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   +  +   + + I Y R R   G  LID   +   +A++  +I A  AL+++    
Sbjct: 246 GAANVIKALENCVTQTIEYCRERKTFGQPLIDNQYIHFRLAELQTEIEALRALTYQACEL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             E K  ++       +A + K    ++   V    ++  GG+GY+ +  ++R YR+   
Sbjct: 306 HIEGKDVTK-------LASMAKLKAGRLGREVTDACLQFWGGNGYMWDNPLSRAYRDVRL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
            SI  G+   M+  +  L+
Sbjct: 359 VSIGGGADEIMLGIICKLM 377


>gi|85375042|ref|YP_459104.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84788125|gb|ABC64307.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 387

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                 +   GL        +        H +          ++       +      + 
Sbjct: 48  REFWNEAGAAGLLGVSVPEEYGGHGGDFRHDMVVIDQQAKHGVDGFAASLHNTIILPYLV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + PK+ + E             +   + +TE   G+D+ +IT+   K  +
Sbjct: 108 RHGTEEQKKKYLPKLVTGE-------------LVSAIAMTEPGVGSDLQSITTTALKDGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNR 282
           G        +  +   +D  +++A+ +       +   LLE     G    +  +KIG  
Sbjct: 155 GYRINGAKTYISNGQTADFIVVVAKTDPNERAKGISLMLLETEGAEGFQRGKKLDKIGLD 214

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +  T EL F N F      L G        +        L  A+ + +G+  +L   + Y
Sbjct: 215 AADTSELFFDNVFVPAENVLGGVEGKGFYQLMGELAQERLVIAMGAATGIEKALEVTLEY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D    +  +AD+     AA            + +     AA A     
Sbjct: 275 VKERKAFGQTIWDFQNTQFVLADLKARGTAARVFVNDCIAKLLKGELDVATAAMA----- 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KYW  ++   V+ + ++  GG+GYI E  IA+ YR++    I  GS   M + +   +
Sbjct: 330 --KYWVTELQSEVVDKCLQLHGGAGYINEYPIAKMYRDARITRIFGGSNEVMKMLIARSM 387


>gi|126728299|ref|ZP_01744115.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
 gi|126711264|gb|EBA10314.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37]
          Length = 546

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/501 (18%), Positives = 180/501 (35%), Gaps = 43/501 (8%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRR 109
              +         +     E A+M       L       P       V     +    R 
Sbjct: 8   PATERFADASLETVEAVLSEAAKMCEEVMAPLQRNGDLDPARLENGVVRTSEGFAEGYRA 67

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
               G   +  + +   +            +   A L        +      +    +  
Sbjct: 68  IAEGGWIAASAEEASGGMGLPLTVTTCVNEMMSGACLALQLNPLMTQGQIEALEHHASDE 127

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +   + PK+ + E+  T             + LTE + G+D+ A++++     DG Y ++
Sbjct: 128 LKALYLPKLVTGEWAGT-------------MNLTEPQAGSDVGALSTKAVPNGDGTYAIT 174

Query: 230 GHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K ++S   +D       ++L ++         +  FLVP+ + D     G+ N L   
Sbjct: 175 GQKIYISWGDNDFTGNVCHLVLGRLPDAGPGTKGISLFLVPKFVPDENGEPGARNDLRVV 234

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            L++K+G   + T  + +    G+L+G  N     +  M     L   +  +     +  
Sbjct: 235 SLEHKMGLHGSPTCVMSYEGATGWLVGAENDGMRAMFTMMNNARLGVGVQGIGVAEGAYQ 294

Query: 334 EAIHYARRRHVSGGI----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388
            A+ YA  R   G      ++    ++R +A++  D+ AA ++   LA + D A++  + 
Sbjct: 295 HALAYAEERKQ-GKSETGNILGHADVRRMLAEMKADVFAARSIGLMLAVALDMARATGDK 353

Query: 389 -EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             AA A ++ PI K +       V ++ ++  GG GYIEE   A++ R+    SI  G+ 
Sbjct: 354 SWAARAGVLTPIAKAFGTDTGIEVASKGVQVHGGMGYIEETGAAQYLRDVRVTSIYEGTN 413

Query: 448 NAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA--RFL 504
               +D++   L  G      L  ++ Q      K  I  L ++     E+   A    L
Sbjct: 414 GIQAMDLVGRKLMDGGEAVFALIDSI-QSYIEDVKGDIPELAEAAWQASENLRDATEALL 472

Query: 505 TEKIALASSAAALYRAGMNDI 525
              +A   + A  Y      +
Sbjct: 473 AMDVADRFAGAVPYLKAFARV 493


>gi|229541829|ref|ZP_04430889.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326249|gb|EEN91924.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 403

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 133/375 (35%), Gaps = 38/375 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+         LL++    GL        +        +   A     + + + 
Sbjct: 26  PFIREWDENHHFETG--LLKKLADLGLMGVCIPEKYGGSGMD--YNALAIVCEELERGDT 81

Query: 149 GHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K       GLTE 
Sbjct: 82  AFRTAVSVHTGLNSLTLLQWGTEAQKQKYL-------------VPQAKGEKIGAFGLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A I +  +K  D  Y L+G K ++S   ++D F++ A  +       +   + +
Sbjct: 129 GAGSDVAGIGTTAEKDGD-FYILNGQKTWISLCDVADHFLVFAYTDKAKKHHGISAFIVE 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM 323
            +  G   + +K K+G R+  T EL F N         N+     E  KI +  LD+   
Sbjct: 188 RTMPGFSSKAIKGKLGIRAGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSALDNGRF 244

Query: 324 SVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +V+     L +A       Y   R   G  +    ++++ IA +      +  L FR   
Sbjct: 245 TVAAGACGLIQACLEASVKYCHERKTFGHEIGKHQLVQQMIAKMEAGYQMSRLLVFRAGE 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             ++ K  + E + A+  A       C  A     +A++  G  GY  E  + R+ R S 
Sbjct: 305 LKNQGKRNTRETSLAKWQA-------CDFANEAANDAVQIHGAYGYSSEYPVERYLRNSK 357

Query: 439 ANSILLGSGNAMVLD 453
           A  I  G+     + 
Sbjct: 358 APVIYEGTREIHTIM 372


>gi|327295096|ref|XP_003232243.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326465415|gb|EGD90868.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 435

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 135/384 (35%), Gaps = 34/384 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 74  EEIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 131

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 132 DPSVSVMVDVHNTLVNTAVLKYGSAAIKKRWLPRL--------------ATDTVGSFCLS 177

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 178 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFVV 237

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 238 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 294

Query: 323 MSVSGMRVSLAEAIHYAR------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           + ++     LA              R   G ++     M+  +A    +IAAA AL F  
Sbjct: 295 IGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNA 354

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   +  +   ++AA A       K +  ++A  V   A+E +GG G++ E    + +R+
Sbjct: 355 ARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRD 407

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           S   +I  G+ N  +  +   L+K
Sbjct: 408 SKIGAIYEGTSNIQLQTIAKSLQK 431


>gi|126666971|ref|ZP_01737947.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628687|gb|EAZ99308.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 598

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 87/505 (17%), Positives = 175/505 (34%), Gaps = 59/505 (11%)

Query: 41  SLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF 99
             L A +      V  +  + + E     T+  LA +      Q   +   G     V  
Sbjct: 22  PALWASLPKVAENVDPDTADAILEEAGKITSGVLAPLNREGDEQGCKWTAEG-----VTS 76

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              +    +  +  G +    +     +   +    +   +   A +  G     +  + 
Sbjct: 77  PEGFKEAYQTIVDGGWNALGGNPEQGGMGMPKTLVSQFEEMLQGANMAFGLAPMLTAGAC 136

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +  + + + PK++S  +             +  + LTE   GTD+  I ++ +
Sbjct: 137 LALDAHGSNELKETYLPKMYSGVW-------------SGAMDLTEPHAGTDLGIIRTKAE 183

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
              DG + ++G K F++    D       ++LA++ G       +  FLVP+ L      
Sbjct: 184 PNDDGSFAVTGTKIFITWGEHDMAENIVHLVLAKLPGAPKGPKGISMFLVPKFLVKDDGS 243

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N +    ++ K+G + +AT  + +    G+L+G+ N     +  M     L   + 
Sbjct: 244 LGDRNPVTCGSIEKKMGIKGSATCVMNYDAARGWLVGEENKGLNAMFTMMNYERLGVGVQ 303

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATA 371
            +     SL  A  YA+ R  S               ++  P ++R +  +   +    A
Sbjct: 304 GLGAAEASLQSAREYAKDRIQSRAPSGAQQPEKAADPILVHPDVRRMLLTMKGYVEGGRA 363

Query: 372 LSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            S  +A   D AK         R        ++ P+ K +       V     + +GG G
Sbjct: 364 FSTYVAQWLDIAKYADDSEQERRIHAEGMVSLLTPVAKAFLTDRGLDVCIIGQQVLGGHG 423

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK- 482
           +I E    +  R+     I  G+     LD++     G+    +L+    QD+ +  ++ 
Sbjct: 424 FIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGSQ--GKLYELFAQDVAAFIEEN 481

Query: 483 -VITILRDSISLCKEDKGLARFLTE 506
                LR  + L          +TE
Sbjct: 482 SDEQSLRPYLELLAAALERLSDVTE 506


>gi|222055284|ref|YP_002537646.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564573|gb|ACM20545.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 380

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 145/374 (38%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P            GL   +   ++       A  +             
Sbjct: 25  PRAQELDEKSLFPEHAR--DLFAQLGLLNPLLPAAYGGTEMGIATVVLILEEISRVCAST 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+         +    +P + + + P+ FS E           + +   LG TE   G
Sbjct: 83  ALLLIGQFDGMLPIIHGGSPALKEKFLPR-FSGE-----------SKLLTALGATEPNAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + ++ ++  D  Y ++G K F+++  ++D  ++ A  +   G   +   + +   
Sbjct: 131 SDLLNMKTRAERKGD-KYVINGQKCFITNGSVADITVVYAYTDPSKGAKGISAFVVERGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL Y R + K+G R +   EL F N       L+G+       +     +  +  A  +
Sbjct: 190 PGLIYGRDEVKMGMRGSINSELFFENMEIPAENLIGEEGTGFANLMQTLSVNRIFCAAQA 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+++AR R   G  +     ++  IAD+A  + A+  L+ + A   DE  
Sbjct: 250 VGIAQGALEIAMNHARERVQFGNTIAHLTPIQFMIADMATAVEASRLLTRKAAQLVDEHD 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +      A +   + K +    A  V  +A++ +GGSGY++E ++ R  R++    I  
Sbjct: 310 KK------AVVFGGMAKTFASDTAMQVTTDAVQVLGGSGYMKENNVERMMRDAKLTQIYT 363

Query: 445 GSGNAMVLDVLNLL 458
           G+     +     L
Sbjct: 364 GTNQITRMVTGRAL 377


>gi|10580725|gb|AAG19565.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 340

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 129/358 (36%), Gaps = 24/358 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           + ++   GL       ++                   A    G  ++ +   A  +    
Sbjct: 1   MDKAADAGLLGPGIPMAYGGAGYSPVEVAIIVEELFAADPGIGLCVASAGFGAEAITAFG 60

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + +               P+      +G  ++E   G+D+A++++  +K  D   
Sbjct: 61  TDDQKRRFLE-------------PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGDEWI 107

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                 W  +  + D F++L + +           +++ +   +G   +++  K+G R++
Sbjct: 108 IDGNKMWITNGSVGDYFVVLCRTDPDASGRYEGFSQIVVESDRDGFTAEKITGKLGIRAS 167

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL            +     G ++ M+         A   V   R +   A+ YA+ 
Sbjct: 168 DTAELVLDAVRVPEENLIGTRGGGFLQLMQFFDETRTTVAAQGVGIARGATERALAYAQE 227

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + D   ++  +A++     AA  L+ + A S D    +         +A + K
Sbjct: 228 REQFGQPVADFQAIQHKLAEMQTKTEAARTLTRKSAWSVDHRDDQ------LTALASMAK 281

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +  ++A  V  EA++  GG+GY+ +  + R YR++    +  G+       +   + 
Sbjct: 282 SFASRIAVEVADEAVQIHGGAGYVNDFDVERFYRDAKITQLYEGTTEIQKNVIAREMM 339


>gi|323456710|gb|EGB12576.1| hypothetical protein AURANDRAFT_58548 [Aureococcus anophagefferens]
          Length = 373

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 143/370 (38%), Gaps = 22/370 (5%)

Query: 98  EFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           E  P   A+  +S +  GL   +++  F  V  ++      A    M             
Sbjct: 13  EIAPLVKAMDAKSELDAGLLAKLFENGFMGVEVEERFGGSGASFTAM-------CCVIEE 65

Query: 157 TSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +    A+ T   VH             E       P   + +     L+E   G+D  A
Sbjct: 66  LAKVDPAVSTCVDVHSTVVNNTLNFWGGEDLKARYLPRLASEIVGSFCLSEPGSGSDAFA 125

Query: 214 ITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + ++ ++ +DG + L+G K W  ++  +  F++ A  +  +G   +     DG   GL  
Sbjct: 126 LATRAERKADGSWVLNGEKAWITNAEHAGVFLVFANADPSLGYKGITCFAVDGGAPGLTV 185

Query: 273 QRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R ++K+G R+++T  +   +       +LGD+         +     +      V   +
Sbjct: 186 GRKEDKLGIRASSTCPVVLEDVVVGPEAVLGDVGAGYKYAIGILNEGRIGIGAQMVGLAQ 245

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                 + Y   R   G  + D   M+   A++A +IAAA  L +  A   ++      +
Sbjct: 246 GCFDATMPYLFERSQFGSAVGDFQGMQMQYAEVATEIAAARLLVYNAARKKEQGLPFIAD 305

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A++ A        ++A    ++ +E +GG G++++    + +R+     I  G+ N 
Sbjct: 306 AAMAKLKA-------SRVAELSASKCIEWMGGVGFMKDYPAEKFFRDCKVGQIYEGTSNI 358

Query: 450 MVLDVLNLLE 459
            +L +   ++
Sbjct: 359 QLLTIAKDIK 368


>gi|302866634|ref|YP_003835271.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302569493|gb|ADL45695.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 377

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 143/382 (37%), Gaps = 37/382 (9%)

Query: 85  HAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARL 140
               P  ERW  D +     W    R +   GL     D  +       ++ H +    L
Sbjct: 23  KEITPHHERWEADSIVDRGVW----RAAGAAGLLGFFVDERYGGAGVTDRRFHAVLTEEL 78

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                      +   +    +  L TT    + W P   S E             +   +
Sbjct: 79  ARAGASGPAFGLHNDIIGPYLTDL-TTEEQKQRWLPGFCSGE-------------IVTAI 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            ++E   G+D+A IT+   +  D  + L+G K F+S+ + +D  +++A+ +   G   + 
Sbjct: 125 AMSEPGAGSDLAGITTTAVRDGDD-WVLNGQKTFISNGILADLVVVVARTDPGAGRRGIS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G ++  T EL FS+       LLG        +     L 
Sbjct: 184 LLVVERGMPGFERGRNLDKLGQKAQDTAELFFSDVRVPAANLLGAEGEGFAYLMRNLPLE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ +++G     A+ + Y R+R   G  +      +  +A++A ++          
Sbjct: 244 RLSIAVAALAGAETVFAQTLDYCRQRQAFGRPIGSFQHNRFVLAELATELRLGRVFVDNC 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + D               A + K+WC ++   V+   ++  GG GY+ E  +AR Y +
Sbjct: 304 LVAPD----------LTAETAAMAKWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLD 353

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +   +I  G+   M   +   L
Sbjct: 354 ARVQTIYGGTTEIMKEVIGRSL 375


>gi|261880075|ref|ZP_06006502.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361]
 gi|270333229|gb|EFA44015.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361]
          Length = 573

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 152/414 (36%), Gaps = 35/414 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++ +   GL      R +  +          + +   A     ++ S        +  
Sbjct: 93  ENIKATRQAGLWGVSMPRQYNGLNIPITIFSMMSEMVATADAGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + + P+I + E               + + LTE   G+D+  +  +  +  DG
Sbjct: 152 FGSEEQKQKYIPRISAGE--------------TMSMDLTEPDAGSDLQRVMLKATQDEDG 197

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G   
Sbjct: 198 TWRLNGVKRFITNGDSDIHLVLARSEAGTKDGRGLSMFIYDKRDGGVTVRHIENKLGIHG 257

Query: 284 NATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           + T EL + N    L GD  +     V  +     L     SV   + +  +AI YA  R
Sbjct: 258 SPTCELVYKNAKAELCGDRRLGLIKYVMSLMNGARLGITAQSVGLAQEAYTQAIEYANAR 317

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE--- 389
              G  +   P +   ++ +   + A  A+ ++ +   D          E K   EE   
Sbjct: 318 VQFGKKIAMFPAVYDMLSRMKAKLDAGRAILYQTSRYVDIYKTLEDISRERKLTPEERKE 377

Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               +  A  + P++K    + A     + +   GGSG+I E    R YR+    SI  G
Sbjct: 378 MKTYSRLADALTPLSKGMVSEYANQCAYDCISVHGGSGFIMEYKCQRLYRDVRIFSIYEG 437

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           +    V+  +  +  GT L   +   L ++     K     +   I L +E   
Sbjct: 438 TTQLQVVAAMRYITNGTYL-NIINEMLPEETSDEMKDCKERIGKCIKLYEEAIA 490


>gi|163852660|ref|YP_001640703.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163664265|gb|ABY31632.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 596

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 109/561 (19%), Positives = 193/561 (34%), Gaps = 84/561 (14%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG--ERWD-KV 97
           LL  ++A                +      E  R+A      L+      G   R D  V
Sbjct: 14  LLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G         F        H +  A    ++       M P +T
Sbjct: 74  VTPKGFKAAYDAYAAGGWMGLSIPEEFGGQGLP--HVLNTAMQEFVSGANLALSMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    +P     + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M     L 
Sbjct: 239 ADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +     +   A+ YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKVADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    A + D A    + A          +M P+ K        A   EA +  GG
Sbjct: 359 AARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GY+EE  +++  R++    I  G+     +D++                L +D G +  
Sbjct: 419 HGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKDGGRAMM 465

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFLDNCH 539
             +T ++  I    ED+G+  F+          A   L  A M  + + F +    DN  
Sbjct: 466 AFLTEVQTFIKDHGEDEGMKPFVA-----PLQPALNDLQAAVMWLMQNAFSK---PDNAG 517

Query: 540 STHCMLHGRFNAAHIIDSLYL 560
                     +  H++  + L
Sbjct: 518 ------AAATDLMHLLGQVVL 532


>gi|114797077|ref|YP_760546.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114737251|gb|ABI75376.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 589

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 87/484 (17%), Positives = 184/484 (38%), Gaps = 51/484 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A++A      L+      G   +   V   P +    +  +  G      
Sbjct: 35  DLVRPILEEAAKLARDVLAPLNPVGDAHGAVLKDGGVVAPPGFGDAYKAFVEGGWMGLAA 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +      +A  +    ++  A +  G     S  +   +    T      + PK+ S
Sbjct: 95  PEEWGGQGLPKALALGVMEMFHGANMAFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+ A+ ++ +   DG Y ++G K +++    
Sbjct: 155 GEWTGT-------------MNLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYITWGDH 201

Query: 241 DA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ + D     G  NG+    L+ K+G   +
Sbjct: 202 DMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGTPGERNGVRCIGLEKKMGIHGS 261

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  +E+S   G+L+G+ N     +  M     L+  +  V+    +   A  YA+ R  
Sbjct: 262 PTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAYAQERKQ 321

Query: 345 SG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA---- 393
                      ++    ++R +  +   +AAA A+ +    + D A S  +    A    
Sbjct: 322 GAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDVRAAAKT 381

Query: 394 --RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              ++ PI K W   +   V +  ++  GG G++ E   A+ YR++    I  G+     
Sbjct: 382 REDLLTPIAKAWSTDIGVEVASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEGTNGIQA 441

Query: 452 LDVLNLLEKGT------NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +D++     GT       +  ++  T+ Q   ++  +++ I     +        + ++ 
Sbjct: 442 IDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLVQIADRLKAGAAALSEASEWMV 501

Query: 506 EKIA 509
           + +A
Sbjct: 502 KTLA 505


>gi|110760324|ref|XP_391840.3| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Apis
           mellifera]
          Length = 400

 Score =  261 bits (666), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 118/310 (38%), Gaps = 27/310 (8%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +    T      + PK+ S E+                L ++E   G+D+ ++
Sbjct: 107 SNLCINQIHRNGTEEQKHKYLPKLCSGEH-------------IGALAMSESTSGSDVVSM 153

Query: 215 TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLC 271
             + +K +D  Y L+GHK W  + P +D  I+ A+ +         +   + +    G  
Sbjct: 154 KLRAEKKND-YYILNGHKFWITNGPDADTIIVYAKTDPNAIKQQHGITAFIVERDFEGFS 212

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +  +K+G R + T EL F +    +   LG +N     +     L  +  A   +  +
Sbjct: 213 IAQKLDKLGMRGSNTGELVFQDCKVPVKNVLGQVNKGIYVLFSGLDLERVTLAAGPLGII 272

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +     A  YA  R      + +  +++  IA++   ++A  +  + +  S D      +
Sbjct: 273 QACCDVAFEYAHVRKQFEKRIAEFQMIQEKIANMYTSLSACRSYLYSVVRSCDAGYINRK 332

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +             +  + A     +A++ +GG+GYI +    R  R++    I  G+  
Sbjct: 333 D-------CAAVILYIAECATKAALDAIQILGGNGYINDYPTGRLLRDAKLYEIGAGTSE 385

Query: 449 AMVLDVLNLL 458
              + +   +
Sbjct: 386 IRRMVISRAI 395


>gi|323489846|ref|ZP_08095070.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323396481|gb|EGA89303.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 588

 Score =  261 bits (666), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 74/407 (18%), Positives = 153/407 (37%), Gaps = 36/407 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  ++   GL       ++  +   +  K         A        + +  +   +   
Sbjct: 64  LFEKAGELGLLGHSVPENYGGLGLDKISKGLVGESLGSAGSYGVAHSNHTCIATLPITYF 123

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            TP+  + + PK+ S E+                  LTE   G+D  +  +  +   +  
Sbjct: 124 GTPQQKETYLPKLASGEF-------------IGAYCLTEPGAGSDALSAKTTAKLNEEKT 170

Query: 226 -YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+++   +D FI+ A+V G          + +    GL     + K+G + 
Sbjct: 171 HYIINGTKMFITNAEFADTFIVYAKVNGTA----FTAFIVEKDHPGLSLGPEEQKMGIKG 226

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T  + F +    +   L  +  G +  +    L   +     +   +  L   + Y  
Sbjct: 227 SSTRAVIFEDCEVPVENLLGEIGKGHIIALNVLNLGRYNLGSACMGAAKYGLELTLKYTS 286

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-------KSRSEEAAYA 393
            R   G  + +    +  +A++AL I A+ +L +R A   + A       +   E A   
Sbjct: 287 ERRQFGKAIAEFSATQEKLANMALQIYASESLQYRTAGYLESALGDLYDSQDHPEIAKQL 346

Query: 394 RIMA---PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              A    + K    +    ++ EA++  GG G+I+E  I + YR+S  N I  G+    
Sbjct: 347 MEYAVECAVCKVHGSETLDFIVDEALQLHGGYGFIKEYKIEQLYRDSRINRIFEGTNEVN 406

Query: 451 VLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            L ++  L     KG    ++L +++ ++L +       +L + I  
Sbjct: 407 RLLIVGNLLKQTAKGKVPLQKLMASVVEELAAPKPLTDDVLANEIEA 453


>gi|71279398|ref|YP_267416.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71145138|gb|AAZ25611.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 386

 Score =  261 bits (666), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/420 (19%), Positives = 151/420 (35%), Gaps = 48/420 (11%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALL 107
           + + + ++L +  E V     +E+A              P  E+W+      AW    + 
Sbjct: 5   YCTWIDEDLRIFSESVNKFIDKEIA--------------PYYEKWE----DDAWMPREIW 46

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASMVAL 164
            +    GL C      +               ++    +  +  G +   +      +  
Sbjct: 47  NKLGQAGLLCVDMPEEYGGFGVDFKFAALINDIFYRRGVGAIAGGGIAVHAGIVGHYILN 106

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M T    + + PK+   E                 +G+TE   G+D+ A+ +  +K+ DG
Sbjct: 107 MGTEAQKQKYLPKMACGEC-------------VGAIGMTEPGAGSDLKALKTSAKKV-DG 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+S+      ++LA + +   G   V   + D    G    +   K+G   
Sbjct: 153 GYVINGSKTFISNGQHCDIVVLACKTDPNAGAKGVSLFIVDADTKGFVKGQKLKKLGIHC 212

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F + F      L  ++TG +  MK L    L  A+   +     L   I Y +
Sbjct: 213 QDTSELFFDDMFVPDDALLGPLNTGFIAMMKELPRERLLLAVGGQAAAEGMLEITIDYVK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R+  G  + D    +  +A++A  +    A   +      E K          + A + 
Sbjct: 273 ERNAFGKRIADFQNTRFKLAELATGVRVQKAFVDQCVMLLAENK-------LDAVTASMA 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    ++   V  E ++  GG GY+ E  IAR + ++    I  G+   M   +   L K
Sbjct: 326 KLHVTELQGKVADECLQFFGGYGYMTEYRIAREFVDARVQRIYGGTSEIMKEIIGRELIK 385


>gi|91779013|ref|YP_554221.1| butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91691673|gb|ABE34871.1| Butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 377

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 140/394 (35%), Gaps = 35/394 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +        P   +WD+    PA   ++ +    G    I    +      
Sbjct: 9   QRMIRDAARDFAT-ERLAPYAGQWDRDAQLPA--EVVTQMGELGFLGMIVPAEWGGSYTD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 A             LMS   +     +    +      +   + +         
Sbjct: 66  YVAYALALEEIAAGCASCATLMSVHNSVGCGPILNFGSAAQKDRYLHDLATG-------- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                       LTE + G++   + ++   + DG + L+G K F+++   +   I+ A 
Sbjct: 118 -----RRIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILNGSKQFVTNGARAHVAIVFAV 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +      G    + ++K+G R++ T  +   +       + N+   P
Sbjct: 172 TDPDRGKRGLSAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCAVP---EANLLGEP 228

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADI 362
            E ++I L  L+   + ++   + +A A       YA  R   G  L +   +   +AD+
Sbjct: 229 GEGLRIALSNLEGGRIGIAAQALGIARAAFDAARLYASERIQFGKALKEHQTIANMLADM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L    A    E K    E       A   K +  ++A  + + A++  GG 
Sbjct: 289 ATRLNAARLLVHHAARLRTEGKPCLSE-------ASQAKLFASELAEEICSNAIQIHGGY 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 342 GYLEDYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|225561551|gb|EEH09831.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 429

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 115/289 (39%), Gaps = 17/289 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F+         P   T+      L+E   G+D  A+ ++  K   G        W  +S 
Sbjct: 147 FADAEGKRKWLPKLATNTVGSFCLSEPVSGSDAFALQTKAVKTPSGYKINGSKMWITNSI 206

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +  FI+ A ++   G   +   + +    G    + + K+G R+++T  L F +     
Sbjct: 207 EAGFFIVFANLDPSKGYKGITAFMVEKGTPGFSIAKKEKKLGIRASSTCVLNFDDV---E 263

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYAR------RRHVSGGILID 351
           +   N+     +  K  I  L+   + ++     LA              R   G ++ +
Sbjct: 264 IPKENLLGEEGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGE 323

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              M+  +A    +IAAA AL +  A   +  +   ++AA A       K +  ++A  V
Sbjct: 324 FQGMQHQVAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMA-------KLYASQVAGRV 376

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              A+E +GG G++ E    + +R+S   +I  G+ N  +  +  +L+K
Sbjct: 377 AGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 425


>gi|328885620|emb|CCA58859.1| Branched-chain acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 383

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 137/380 (36%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LRR+   GL               +A  +         
Sbjct: 24  EQLAPNAVAWDQDKHFPV--DVLRRAAALGLGGVYVREEHGGSGLTRADGVLVFETLATG 81

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +P     W P +                       LTE
Sbjct: 82  CPSIAGYLSIHNMVAWMIDRYGSPAQRARWLPDLC-------------AADTLGSYCLTE 128

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++ ++  D  Y L+G K F+S    SD +I+LA+     G   +   + 
Sbjct: 129 PGAGSDAAALRTRAERDGDH-YVLTGVKQFISGAGTSDVYIVLARTG-GGGPGGISAFVV 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           +    G+ +   + K+G  +  T ++            LG                 L  
Sbjct: 187 ERGDPGVSFGANERKMGWNAQPTRQVVLDGVRIPADRRLGAEGEGFRIAMHGLNGGRLGI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G + +L  ++ +   R   G  L+D   ++  +AD+A ++ AA AL  + A++ 
Sbjct: 247 AACSLGGAQSALDRSLTHLADREAFGAPLLDAQALQFRLADMATELTAARALVRQAADAL 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           A  +  + K +      +V   A++  GG GY+ E  I +  R+   +
Sbjct: 307 DRGDPA------AVQLCAMAKRFATDTGFSVADRALQLHGGYGYLSEYGIEKIVRDLRVH 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M + V   L +
Sbjct: 361 RILEGTNEIMNVIVARGLTE 380


>gi|332376027|gb|AEE63154.1| unknown [Dendroctonus ponderosae]
          Length = 412

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 130/403 (32%), Gaps = 45/403 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            TA++ AR      P    Y   G   WD          + R++   GL        F  
Sbjct: 39  ATARKFAR--EEVIPVAAQYDKSGAFPWD----------IFRKAHGLGLLNVHVPEEFGG 86

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +             +       G     S    + + L+      K +  ++        
Sbjct: 87  LGLGNFEGCLIQEEFAYGCTGIGTACEGSGLGQTPILLVGNNEQKKKYLGRLL------- 139

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +        +TE   G+D+  + ++ +K  D         W     +++ + +L
Sbjct: 140 ------EEPTIAAYCVTEPGAGSDVNGLKTRAEKKGDEYILNGQKMWITGGGVANFYFVL 193

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+      C         + +    G+   R +  +G R++ T  + F +     +   N
Sbjct: 194 ARTSQDSKCPANKAFTGFIVERDWPGVIPGRKEINMGQRASDTRGIVFEDVK---IPKEN 250

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G  +  KI +          A  +V   +  L EA  YA  R   G  +     +  
Sbjct: 251 VLLGEGDGFKIAMQAFDKTRTPVAANAVGLAQRCLDEASKYALERKTFGVPIASHQAVAF 310

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ I        + A   D     S         A I K W   MA    ++A++
Sbjct: 311 MLADMAIGIETGRLAWMKAAWETDRGIRNS-------YSAAIAKCWAADMANKCASDAVQ 363

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG+G+  E  + +  R++    I  G+     L +   L +
Sbjct: 364 IFGGNGFNSEYPVEKLMRDAKIFQIYEGTSQIQKLIISRQLAE 406


>gi|319795898|ref|YP_004157538.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598361|gb|ADU39427.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 382

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 136/382 (35%), Gaps = 33/382 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           ++  +     +   V      H + R++   GL C+     +        H+       +
Sbjct: 28  EVLPHDEEARKRGHV-----GHEVWRKAGALGLLCADIPDDYGGAGGDFRHEAVV-YEEM 81

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
             +   G   S     A  +         + + P++ S E                 + +
Sbjct: 82  SRRGLTGMATSVHAIVAHYILNHGAEEQKQRYLPRMASGEM-------------VGAIAM 128

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D+  + ++ +K  DG Y ++G K F+++   +   +++ + +   G      L
Sbjct: 129 TEPGAGSDLQGVRTRAEKK-DGGYLINGSKTFITNGYLAGLVLVVCKTDPAQGAKGTSIL 187

Query: 262 LEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--I 316
           + +     G    R+ +KIG ++  T EL F +        L      G  + M  L   
Sbjct: 188 IVETEGCKGFRVGRVLDKIGMKAQDTSELFFDDVRVPADALLGGQEGQGFFQLMSDLPYE 247

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                + +++ M  +    + Y R R   G  + +    K  +A+IA  I    A   R 
Sbjct: 248 RTIIGVSALAAMEGAYEATLDYVRDRKAFGKPIAEFQNTKFKLAEIATQIKVGRAFIDRC 307

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                  +  +  A+ A       K W  +    V+ E ++  GG GY+ E  +AR Y +
Sbjct: 308 VEDLVAGRLDTATASMA-------KLWGTEAQGRVMDECVQLFGGYGYMNEYMVARMYAD 360

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+   M   +   L
Sbjct: 361 ARVQRIYGGTNEIMKEVISRAL 382


>gi|297617420|ref|YP_003702579.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145257|gb|ADI02014.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 382

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 132/369 (35%), Gaps = 25/369 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +D+ E  P    ++++    G+ C      +  +                  L       
Sbjct: 33  YDETEEFP--WPVVKKMQELGIGCMNAPEKYNGMAFDNVTLCMVVEEICKGCLGIAITPL 90

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++ ++  V    T    + W   I                       +TE   G+D+A 
Sbjct: 91  ANMLASEPVVYAGTEEQKEWWFTGIC-------------NEGQLASYAVTEPGAGSDVAN 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           I++  +K  D  Y L+G K F+++   +  + +LA ++           L D    G+  
Sbjct: 138 ISTSAKKDGD-YYILNGTKCFITNARYASKYAVLATLDKSKKHRGQCFFLLDRDWEGISI 196

Query: 273 QRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + + K+G R + T EL   N      + +G+                   A  SV    
Sbjct: 197 GKSEKKMGMRCSDTSELILDNVKVHKKYRVGEEGDGFKIAMTAFNSSRPFIAAASVGVAT 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA++R   G  + D   ++  +AD+A++I AA  L  + A   D        
Sbjct: 257 GAFEVARDYAKQRVAFGRPIADFQAIQFMLADMAMEIEAARLLWQKAAWQLDNKHPLE-- 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  ++ I+K +   +A  +  +A++ +GG G+  +    +  R++    I  G+   
Sbjct: 315 ---AAQLSAISKCYAADIAMKIATDAVQILGGYGFCRDYPAEKMMRDAKILQIFEGTSQI 371

Query: 450 MVLDVLNLL 458
             + +   L
Sbjct: 372 QRIIIARNL 380


>gi|12805021|gb|AAH01964.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Homo sapiens]
 gi|123980380|gb|ABM82019.1| acyl-Coenzyme A dehydrogenase family, member 8 [synthetic
           construct]
 gi|123995199|gb|ABM85201.1| acyl-Coenzyme A dehydrogenase family, member 8 [synthetic
           construct]
          Length = 415

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 62  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTST 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 120 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G +G   +  ++ +   
Sbjct: 167 SDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGLGPKGISCIVVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  ++      ++ A  S
Sbjct: 225 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCS 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 285 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVAL---- 340

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 341 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 398

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 399 GSNEVMRILISRSLLQ 414


>gi|149186181|ref|ZP_01864495.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           SD-21]
 gi|148830212|gb|EDL48649.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp.
           SD-21]
          Length = 387

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 132/360 (36%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R +   GL  S     +        H++          +E       +      + 
Sbjct: 48  RDFWREAGEAGLLGSSVPEKYGGHGGDFRHEMVVIDQQAKHNVEGFAASLHNTVILPYLV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + PK+ S E             +   + +TE   G+D+ +IT+   K  +
Sbjct: 108 RHGTEEQKKKYLPKLVSGE-------------LVSAIAMTEPGVGSDLQSITTTALKDGN 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNR 282
           G        +  +   +D  I++A+ + +     +   LLE     G    +  +KIG  
Sbjct: 155 GYRINGAKTYISNGQTADFIIVVAKTDPKERAKGISLMLLETEGAEGFQRGKKLDKIGMD 214

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +  T EL F + F      L G+       +        L  A+ +++G+  +L   + +
Sbjct: 215 AADTSELFFDDVFVPAENVLGGEEGKGFYQLMGELPQERLIIAMGAMTGIEKALETTMDF 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D    +  +AD+     AA           ++  +R  +   +   A 
Sbjct: 275 VKNRKAFGQTIWDFQNTQFVMADLKARATAARVFV-------NDCIARHLKRELSVDTAC 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + KYW  ++   V+ + ++  GG+GYI +  IAR YR+S    I  GS   M + +   +
Sbjct: 328 MAKYWVTELQGEVVDKCLQFHGGAGYINDYPIARMYRDSRITRIFGGSNEVMKMVIARSM 387


>gi|119478557|ref|ZP_01618500.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119448461|gb|EAW29710.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 384

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 135/358 (37%), Gaps = 32/358 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +    +   + A  L   + +    + + +   ++ +A   T   
Sbjct: 46  EMGLFGMTIPEQYGGLGLTMEEESLVAIELGRTSPVFRSLIGTNNGIGSAAIAFEGTQEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK  S E             +     LTE   G+D +++ +  ++  D       
Sbjct: 106 KDTYLPKYASGE-------------LIGSFCLTEPDVGSDASSVKTSAKRDGDVYILNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P +  F ++A+ +    G   +   + D + +G+   +   K+G    +T ++
Sbjct: 153 KRYITNAPRAGTFTVMARTDPDKPGASGITAFIVDANSDGITVGQSDKKMGQAGTSTSDV 212

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
            F +        +      G    MK+   LD   + ++ + V +AE     A+ +A  R
Sbjct: 213 IFEDVKVPAKNVIGGVEGKGFYTSMKV---LDRGRIHIAALSVGIAERLIKDALQFAIER 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + +  +++  +AD   +  AA  +    +   D  ++ + E       A   K 
Sbjct: 270 KQFGKPIAEHQLIQAMLADSKTEAYAAKCMVMDASRQRDLGENITAE-------ASCCKL 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +M   V   A++  GGSGY+ E ++ R YR+     +  G+     + +   + K
Sbjct: 323 YATEMVGRVADRAVQIHGGSGYMAEYAVERFYRDVRLLRLYEGTSQIQQIVIARTMIK 380


>gi|2407655|gb|AAC48316.1| 2-methyl branched-chain enoyl CoA reductase isoform I [Ascaris
           suum]
          Length = 419

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 138/389 (35%), Gaps = 35/389 (8%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           +   P    +   GE        P    +++++   G+       ++  +       +  
Sbjct: 48  DEVIPVAAHHDETGE-------FP--WGVIKKAHAAGILNGNIPAAYGGLDLDLLSNVIV 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +             +  +  + + + L  +  + K +  ++              +  + 
Sbjct: 99  SEEIAYGCAAMATALLVNDFAETPLILAASEPIKKKFLGRMT-------------EEPLM 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
               +TE   G+D+A + ++ +K  D         W  ++  +  F +L + +      +
Sbjct: 146 AAYAVTEPWAGSDVAGVKTKCEKKGDEYVINGSKMWITNAGPASWFFVLCRSDPDPKAPI 205

Query: 258 V---PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK 313
                  + DG   G+   + +  +G R++ T  + F +        +     G +  MK
Sbjct: 206 SKAFTAFVVDGDTPGITRGKKEMNMGQRASDTRAVTFEDVRVPAENMVGAPGEGFIVAMK 265

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                  + A ++       L EA  YA  R   G  +     +   +AD+A+++  +  
Sbjct: 266 TFDKTRAEVAAIATGLSSRCLDEAAKYALERKTFGVPIAQHQAVAFMLADMAINLELSRL 325

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++R A  + + + R          + I K +C   A    + A++ +GG+GY +E  + 
Sbjct: 326 ITYRSAWEWMQGRPRG-------YFSSIAKCFCADTANIAASNAVQILGGNGYNKEYPVE 378

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  R++    I  G+     + V   L K
Sbjct: 379 KLMRDAKIMQIYEGTSQIQRIIVAKDLLK 407


>gi|170722319|ref|YP_001750007.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760322|gb|ACA73638.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 595

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 88/488 (18%), Positives = 172/488 (35%), Gaps = 56/488 (11%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHAL 106
           V +    LG       +    ++ AR A+     L+      G R ++  V     +   
Sbjct: 20  VTQHCARLGNGLDRETIDGILEQGARFASEVVAPLNRQGDEQGCRLEQGQVLTPEGFRQA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R  +  G          +     Q        + + A L        +  +   +    
Sbjct: 80  YRLYVEQGWGGMTGPAEHDGQGLPQMVAACFHEMLMSASLAFRIYSGLTEGAVLALHRHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P + +D+  K+ S E+  T             + LTE + GTD+A + ++ +   DG Y
Sbjct: 140 SPELKRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEPQGDGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G PN L
Sbjct: 187 RISGSKIFISGGDQDLTDNIIHLVLARLPDAPAGVRGISLFLVPKFECAADGGPGVPNAL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               L++K+G +  AT  + F    G+L+G+ N     +  M         +  +     
Sbjct: 247 GCGALEHKMGIKGAATCVMNFDGARGWLVGEANQGLACMFTMMNDARFQVGLQGLGIAEA 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +    + YAR R  S               +I  P ++R +            L+   A 
Sbjct: 307 AFQGGLTYARERLQSRSLAGPVAPERSADPIICHPDVRRMLLTQKTLSEGCRMLAAYAAQ 366

Query: 379 SFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + D      + + ++     A ++ P+ K +   +   V +  ++  GG GYI E  + +
Sbjct: 367 ALDLEHGAAQPEVQAAAGRRAALLIPVVKAFLTDVGQEVASLGVQLYGGHGYIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
             R+S    +  G+     LD++   +L  G      L   L +         +T + ++
Sbjct: 427 LMRDSRITQLYEGTNGIQALDLVRRKVLADGGEQLRLLIDELLEAAHECRADDLTGMAEA 486

Query: 491 ISLCKEDK 498
           ++L  ++ 
Sbjct: 487 VTLRLQEW 494


>gi|53714660|ref|YP_100652.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46]
 gi|60682673|ref|YP_212817.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343]
 gi|253565164|ref|ZP_04842620.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5]
 gi|52217525|dbj|BAD50118.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46]
 gi|60494107|emb|CAH08899.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343]
 gi|251946629|gb|EES87006.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5]
 gi|301164151|emb|CBW23707.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 638R]
          Length = 567

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/508 (19%), Positives = 185/508 (36%), Gaps = 60/508 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE          A   ++  P            ++V +       L      GL  
Sbjct: 55  LEIVGEICG-DIIAPNAEGVDHEGPVCAD--------NRVTYASGTTRNLDACRKAGLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +       I AA +   +     +L       A  +         + +  +
Sbjct: 106 MAMPRRFGGLNFPITPYIMAADIVSRSDAGFENLW-GLQDCAETIYEFANEEQKQRYITR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           +   E               + + LTE   G+D+ ++  +      D  + L+G K F++
Sbjct: 165 VCQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +D  ++LA+ E G      +   + D    G+  +R++NK+G + + T EL + N  
Sbjct: 211 NGDADIHLVLARSEEGTHDGRGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  EA+ YA+ R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE-------AAYARIMA 397
           +   ++ +   + A+ +L +  A   D          E K   EE       A  A    
Sbjct: 331 VAEILSLMKAKLDASRSLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  
Sbjct: 391 PLGKGMGSEFANQNAYDCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRY 450

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILR----------DSISLCKEDKGL---ARFL 504
           +  G  L  ++       +    + +   L+            I+  K+ + L   AR L
Sbjct: 451 VTTGAYL-ARIQEYENMPVAPELEGLQNRLKSMASKYAACVTQITEAKDQELLDFCARRL 509

Query: 505 TEKIALASSAAALYRAGMNDIADVFLEN 532
            E  A       + +      +D+F E+
Sbjct: 510 VEMAAHIIMGHLMVQDASK--SDLFSES 535


>gi|156031211|ref|XP_001584930.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154699429|gb|EDN99167.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 443

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 137/378 (36%), Gaps = 36/378 (9%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
              D+ E   PA   ++ +    GL        +          I               
Sbjct: 89  RDMDEAESMDPA---VVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVGIEELARVDPSVSV 145

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           L+    T  +   +   +  +   W PK+               T+      L+E   G+
Sbjct: 146 LVDVHNTLVNTAVIKYASKELKNKWLPKL--------------ATNTVGSFCLSEPVSGS 191

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A+ ++  K   G        W  +S  +  FI+ A ++   G   +   + +    G
Sbjct: 192 DAFALATKATKTDSGYTISGNKMWITNSMEAGFFIVFANIDPSKGYKGISAFIVEKGMKG 251

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
               + + K+G ++++T  L F +     +   N+     +  K  I  L+   + ++  
Sbjct: 252 FSIAKKEKKLGIKASSTCVLNFDDV---EIPKENLLGEEGQGYKYAIALLNEGRIGIAAQ 308

Query: 329 RVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              LA      A  Y    R   G ++ D   M+  IA    +IAAA AL +  A   + 
Sbjct: 309 MTGLALGAFENATKYVWNDRKQFGQLVGDFQGMQHQIAQSYTEIAAARALVYNAARKKEA 368

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   ++AA A       K +  ++A  V   A++ +GG G++ E    + +R+S   SI
Sbjct: 369 GEDFVQDAAMA-------KLFASQVAQRVSGLAVQWMGGMGFVREGIAEKMWRDSMIGSI 421

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+ N  +  +  LL++
Sbjct: 422 YEGTSNIQLTTIAKLLKQ 439


>gi|94500571|ref|ZP_01307102.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94427361|gb|EAT12340.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 386

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 133/362 (36%), Gaps = 23/362 (6%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +   ++     G                      A              MS +   AS
Sbjct: 38  PQFLDNIKALAELGFMGLEIHEDHGGTQAGTVAFSLAMTEIAKGCASTAVTMSVTNMVAS 97

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++  + +    +++ P++ S EY             A    LTE + G+D +A+  Q  K
Sbjct: 98  VIQAVGSDEQKQNYLPRLCSGEYR------------AGAFCLTESQAGSDPSAMKCQANK 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
              G        +  S   +D  I+ A  +        +   + + +  G+   + +NK+
Sbjct: 146 TEKGWQISGSKLYITSGAYADVLIVWAVTDKTAKPGKGISCFVVEANRQGISIGKEENKM 205

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   +AT E+ F N     G LLG++N              +  A +++   + +   AI
Sbjct: 206 GQSGSATNEVIFENVVVTEGDLLGEVNQGFKIAVGELAGGRIGIASLALGIAQSAHDYAI 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  + D   ++  +A+    + A   L    A+  ++ +  + +A+ A   
Sbjct: 266 EYAKERQQFGQSIADFQGIQWMLAEAETKLNATRLLVLEAAHRKEQGQEFATQASMA--- 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  +    +   A++ +GG+GY+++  + +  R+    SI  G+     L +  
Sbjct: 323 ----KLFASEEGNRICYNALQILGGAGYLKDYPLEQKVRDIRITSIYEGTSEIQKLIIAR 378

Query: 457 LL 458
            L
Sbjct: 379 NL 380


>gi|107023106|ref|YP_621433.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116686652|ref|YP_839899.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105893295|gb|ABF76460.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116652367|gb|ABK13006.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 596

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/507 (19%), Positives = 191/507 (37%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPAEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A    +EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGETVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+    +  AR L
Sbjct: 475 ALGKLDGA---AAASMKAHLEKGARSL 498


>gi|26325820|dbj|BAC26664.1| unnamed protein product [Mus musculus]
          Length = 411

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 58  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 116 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 163 SDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISCIVVEKGT 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 221 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 281 LGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 336

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +   A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 337 --QEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 394

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 395 GSNEVMRMLISRNLLQ 410


>gi|66499429|ref|XP_392111.2| PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 417

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 130/400 (32%), Gaps = 38/400 (9%)

Query: 68  CTAQELARMANYNT--PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              QELAR        P    Y   G+  WD          +++++   GL      +  
Sbjct: 41  REIQELARKFTKEEIIPVAAEYDKNGKYPWD----------IIKKAWSLGLVHKHIPKYC 90

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                        +  +    + V        HK +  ++      
Sbjct: 91  GGMEFNNFDGCLITEELAYGCTGILTALDGTELGEAPVIAFGNKEQHKKYLGRLL----- 145

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                   +  +     +TE   G+D+A I ++ +K  +         W  +  +++ + 
Sbjct: 146 --------EEPIVAAYCVTEPGAGSDVANIKTKAEKKGNEWIINGTKMWITNGGVANWYF 197

Query: 245 MLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +LA+                + +    GL   R +  +G R++ T  + F +        
Sbjct: 198 LLARTNPDPKAPTNKAFTAFIVERESEGLTPGRKEINMGQRASDTRMITFEDVRVPEENV 257

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK         A  +V   + +L EA+ YA  R     I+     +   
Sbjct: 258 LGKEGEGFKIAMKTFDKTRPSVAAGAVGLAQRALDEALKYATERKTFDTIIAGHQAIAFM 317

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+++ I  A     + A + D     +        +A I K +   +A     +A++ 
Sbjct: 318 LADMSIGIETARLAWMKAAWASDHQLPTT------TFLASIAKCYGGDIANKCATDAVQI 371

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG+G+  E  + +  R++    I  G+     L +   L
Sbjct: 372 FGGAGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIISRYL 411


>gi|326927860|ref|XP_003210106.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Meleagris gallopavo]
          Length = 574

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 77/464 (16%), Positives = 173/464 (37%), Gaps = 50/464 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           +   +  +P + ++EL+ + ++V        A   +             ++ D+    P 
Sbjct: 1   MEEEVFPYPEISNEELQEISQFVGPVEKF-FAEEVDS------------KKIDQDAKIP- 46

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               L+     GL        +  +        R   +  +    A  L +        +
Sbjct: 47  -PETLKGLGDLGLFGMQIPEEYGGLGLSNTMYARLGEIISLDGSIAVTLAAHQAIGLKGI 105

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T      + PK+ S E+                  LTE   G+D A+I ++     
Sbjct: 106 LITGTDEQKAKYLPKLASGEH-------------IAAFCLTEPGSGSDAASIQTRATLSE 152

Query: 223 DGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
           DG Y  L+G K W  +  ++  F + A+      +G+V    +   + +    G+ + + 
Sbjct: 153 DGKYFLLNGSKVWISNGGLASIFTVFARTEIVEKDGQVKDK-ITAFIVERDFGGVTHGKP 211

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---- 331
           ++K+G R + T E+ F NT   +   L    G  +    +  L+S   S+          
Sbjct: 212 EDKLGIRGSNTCEVHFENTKVPVENVLGEIGGGFKVAMNI--LNSGRFSMGSASAGMIKK 269

Query: 332 -LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            +     +A  R      L +  +++     +A+      ++++  A   D         
Sbjct: 270 LIELTAEHACTRKQFNRKLSEFGLIQEKFCFMAVKAYVMESMAYLTAGMMDRPGLPD--- 326

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               + A + K +  + A A ++EA++ +GG GY+++    R+ R+S    I  G+   +
Sbjct: 327 --CSVEAAMVKVFSSEGAWACVSEALQILGGLGYMKDYPYERYLRDSRILLIFEGTNEIL 384

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            + +    +   G  L +++    + ++G + ++++  +RDS  
Sbjct: 385 RMYIALTGMQHAGKILTDKIKEIKKGNIGLALQELVNKVRDSTG 428


>gi|325915156|ref|ZP_08177482.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538678|gb|EGD10348.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 597

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 89/527 (16%), Positives = 179/527 (33%), Gaps = 69/527 (13%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
                     D L   AL A                ++    +E  R        L++  
Sbjct: 7   PLTDFRFALHDVLGAEALFARLGYGDAS------ADIIDAVLEEAGRFTTQVLAPLNSVG 60

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G  +DK    V   P + A   + +  G +    +  F          +  + +   
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYDQFVAGGWNGLTAEPEFGGQGMPHTLGVPLSEMINS 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G+    S  ++  +         + +   +    +  T             + LT
Sbjct: 121 ANLAWGNFPLLSHGASEALRQHGEAWQQEAFLKPLTDGRWTGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFL 257
           E   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA+  +   G   
Sbjct: 168 EPHCGTDLGLLKTRAESNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKG 227

Query: 258 VPRLL----------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +   +            G  N L    +++K+G + + T  + F    G+L+G  +    
Sbjct: 228 ISLFVTPKFKVGRDGVVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQ 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L   +  +     +   A+ Y R R  S               +I  P +
Sbjct: 288 AMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRSLSGAKFPDKPADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I      +  L+   A+  D        + R++       + PI+K    + + 
Sbjct: 348 RRMLLTIKSLTEGSRLLALHAASLVDVSHRGVSEQERADAETLVSFLTPISKACQTEWSI 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQ 467
                A++C GG GYI E  + +  R++   +I  G+     LD++      +     + 
Sbjct: 408 ENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKL 467

Query: 468 LFSTLE-----QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             + +E     Q+  ++  + I  LRD    C E   L R + ++ A
Sbjct: 468 FLADVETFANAQEGNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|114706901|ref|ZP_01439801.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
 gi|114537849|gb|EAU40973.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
          Length = 604

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 109/552 (19%), Positives = 198/552 (35%), Gaps = 81/552 (14%)

Query: 61  LGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFHP-AWHALLRRSIHDGLHC 117
           L   +L     E  R A     P L   G  G    D V   P  W A+ +     G + 
Sbjct: 31  LDADLLDAIVGEAGRFASERMAPDLADDGHEGAVVKDGVVTTPKGWPAIYKEWCEGGWNA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWA 175
                +        A  +  A   +      G  + P++T  ++ AL    +  +   + 
Sbjct: 91  LTGPEAHGGQDLPMA--LSTALFEMWNSASMGFAIGPTLTVGAIEALHQHGSEDLRSRYL 148

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
            K+ S E+  T             + LTE + G+D++ I ++ +   DG Y + G K ++
Sbjct: 149 DKLVSGEWTGT-------------MNLTEPQAGSDLSGIKTRAEPAGDGTYRIFGQKIYI 195

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +    D       ++LA++ G       +  FLVP+ L +     G+ N +    L+ K+
Sbjct: 196 TYGEQDFTDNIVHLVLARLPGAPEGVKGISLFLVPKFLVNDDLSLGARNDVFCAALEKKL 255

Query: 280 GNRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           G   + T  + + +           G+L+G+ N     +  M     L  AI  V     
Sbjct: 256 GIHGSPTCTMIYGDDKGETGEPGAIGWLIGEENRGLACMFTMMNNARLLVAIQGVGIAEA 315

Query: 331 SLAEAIHYARRRHVSG--------------GILIDQPVMKRAIADIALDIAAATALSFRL 376
           +  +A+ +AR R                    ++D P + R +  +     AA A+S+  
Sbjct: 316 ATQKALEFARDRRQGRSTRLAKGAEPKGQMAPIVDHPDVTRMLLTMKALTGAARAISYAC 375

Query: 377 ANSFDEAKSRSEEAA---------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            ++ D AK  +                ++ P+ K +   +   V    ++  GG GY+EE
Sbjct: 376 GHAGDMAKHHARAGDGDAAKSWKDRVDLLTPVAKAFSTDVGVEVAGLGVQVHGGMGYVEE 435

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG---TNLFEQLFSTLEQDLGSSGK 481
              A+  R++    I  G+     +D++     L  G   TN   +L S LE     +  
Sbjct: 436 TGAAKLLRDARIAPIYEGTNGIQAIDLVTRKIGLSGGGAVTNYILELRSVLETLEARNLP 495

Query: 482 KVITILRDSISLCKEDKGLARFLTEKI-------ALASSAAALYRAGMNDIADVFLENRF 534
                     +  +E +   RFL+E I       ALA +   L   G+       +++  
Sbjct: 496 DFGRSASMIDAALRELEASTRFLSEAIARGERETALAGATPYLRLFGLTAGGVYLVKSAL 555

Query: 535 LDNCHSTHCMLH 546
             +       L 
Sbjct: 556 AGDPEGGRTALA 567


>gi|75676343|ref|YP_318764.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74421213|gb|ABA05412.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 381

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 147/398 (36%), Gaps = 32/398 (8%)

Query: 70  AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            +++AR  AN          P   +WD+ +  P     +R +   G+             
Sbjct: 12  VRDMARDVANR------KIAPFALQWDEEKHFPV--ETMREAAALGIGGICIRNDVGGSA 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
             +                    +S    ++ M+    +    + W PK+ +        
Sbjct: 64  LSRLDGTLIFEALAQGCPTVSSFISIHNMASWMIDAHGSDEQRRKWLPKLCTM------- 116

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  +     LTE   G+D AA+ ++ ++  D  Y + G K F+S   +    ++  
Sbjct: 117 ------DLLASYCLTEPGAGSDAAALRTRARRDGDH-YVVDGQKQFISGAGASDLYVVMV 169

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
             G  G   V  L+ +    G+ +   + K+G  +  T  + F N    +   +G     
Sbjct: 170 RTGDHGPDGVSALVVERGTPGVSFGANERKMGWNAQPTRAVIFENARVPVANRIGAEGAG 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                       L+ A  S+ G + +L +A+ Y + R   G  L +   ++  +AD+A +
Sbjct: 230 FRIAMAGLDGGRLNIAACSLGGAQSALDKALGYMKERKAFGKRLDEFQALQFKVADMATE 289

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA    +R A++ D   +       A ++  + K     +   V  +A++  GG GY+
Sbjct: 290 LEAARTFLWRAASALDREDTN------ATMLCAVAKRLATDVGFDVANQALQLHGGYGYL 343

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            E  I +  R+   + IL G+   M L V   + +G  
Sbjct: 344 SEYGIEKIVRDLRVHQILEGTNEIMRLIVSRKVIEGAR 381


>gi|229916544|ref|YP_002885190.1| Butyryl-CoA dehydrogenase [Exiguobacterium sp. AT1b]
 gi|229467973|gb|ACQ69745.1| Butyryl-CoA dehydrogenase [Exiguobacterium sp. AT1b]
          Length = 594

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 81/444 (18%), Positives = 155/444 (34%), Gaps = 54/444 (12%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              + +   P L       ER +K EF      LL+ +   GL  +     +      + 
Sbjct: 42  AGFVDDRVMPVL-------ERIEKHEF-DLSVELLKEAGELGLLGADVPEEYGGYQLDKI 93

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                   +  A+  A    +        +    +      + PK+ + E+         
Sbjct: 94  SSSIITERFAKARSFALSYGAHVGIGTLPIVFFGSEEQKHKYLPKLATGEW--------- 144

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE 250
                    LTE   G+D     +       G  Y L+G K W  ++  ++ F++ A+++
Sbjct: 145 ----IAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNAGFANVFVVYAKID 200

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPV 309
           G          + +    G+     + K+G + ++T  L   +    +   L  V  G V
Sbjct: 201 GDK----FSAFIVERDFKGVSTGAEEQKMGIKGSSTRTLILEDVEVPVDNLLGEVGKGHV 256

Query: 310 EDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               IL       A+ +V   + +   ++ YA  R      +   P+++  +A +A +I 
Sbjct: 257 IAFNILNVGRYKLAVGAVGSSKRAFDLSVQYANERKQFKTPISQFPLIQEKLATMAANIY 316

Query: 368 AATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           A  +  +R    F +                ++  A   I   + K +  +    V+ EA
Sbjct: 317 AMESSVYRTGGLFQDSLDALGDENMRDGSKVAQAIAEYAIECSLNKVFASETFDYVVDEA 376

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463
           ++  GG G++ E  +   YR+S  N I  G+     L V            L LL +   
Sbjct: 377 VQIHGGYGFMAEYEVENLYRDSRINRIFEGTNEINRLIVPGTLLKKAMKGELPLLAEAQK 436

Query: 464 LFEQLFSTLEQDLGSSGKKVITIL 487
           L ++L S + Q+L  S      +L
Sbjct: 437 LQKELMSYMPQELDGSPLAREKML 460


>gi|197118510|ref|YP_002138937.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197087870|gb|ACH39141.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 592

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 86/457 (18%), Positives = 165/457 (36%), Gaps = 37/457 (8%)

Query: 95  DKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +++E     H   L++R    GL        +  +   +A  + AA     +   +    
Sbjct: 51  EEIEHQQFEHVVHLMKRCGELGLLMIDVPEEYGGLELDKATSMLAAENISGSGSFSVAYS 110

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +      +    T    K +  K+ + E+                  LTE   G+D  
Sbjct: 111 AHTGIGTLPLVYYGTEEQKKKYLEKLVTGEW-------------IAAYCLTEPDSGSDAL 157

Query: 213 AITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +     +DG  Y L+G K F ++  ++  + + A+V+           L +    G+
Sbjct: 158 GAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEH----FTAFLVERGFEGV 213

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                + K+G + ++T ++   N    +   LG++        ++  +            
Sbjct: 214 SVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGEIGKGHKIAFNVLNVGRFKLGAAVTGA 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-- 385
            + +LA+ I YA  R   G  +     +K  IAD+   + AA ++ +RLA   D+  +  
Sbjct: 274 AKGALADGIKYANLRKQFGRTIGSFGAIKEKIADMTSAVFAAESMVYRLAGLIDQRLATI 333

Query: 386 ----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                              +   + K +C ++   V  E ++  GG G+++E    R+YR
Sbjct: 334 PRDTPNYYDVYQRAIEEYAMECAVAKVFCSEVLAFVADEVVQIHGGYGFVQEYPAERYYR 393

Query: 436 ESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +   N I  G+     L V   LL +       L     +   S        L DS+   
Sbjct: 394 DERINRIFEGTNEINRLLVPGTLLARAMKGEIPLQQEALKAFESLMTPSFEELDDSVPFA 453

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
            E   LA      + LA SAA  ++A + +  +V L 
Sbjct: 454 AEKALLAGLKQAFLVLAGSAAQKFQAAVKEEQEVLLA 490


>gi|17548908|ref|NP_522248.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17431158|emb|CAD17838.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 385

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 143/387 (36%), Gaps = 36/387 (9%)

Query: 92  ERWDKVEFHPAWHALLRR-SIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-------YLM 143
           +R+ +    PA + L     +  G+  ++ D     +   +A+      +       Y +
Sbjct: 16  QRFIRERLVPAENILEEEDEVPAGIVAAMKDMGLFGLSIPEAYGGIGLSMVQECEVVYDL 75

Query: 144 AQLEAGH---LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                       +     +  + +  T      + P+I S E             + I  
Sbjct: 76  GHTSFAFRSVFGTNVGIGSQGILMDGTEAQKAAYLPRIASGE-------------LIISF 122

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+D AA+ ++     D        ++  ++P + AF ++A+  G  G   +  
Sbjct: 123 ALTEPNAGSDAAALQTRATPDGDHYVINGTKRFITNAPRAGAFTLMART-GAEGAGGISA 181

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILIYL 318
            +      G+   +   K+G R   T ++   N        +      G    MK+   L
Sbjct: 182 FIVPADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVPAANIIGGVAGQGFKTAMKV---L 238

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   + +S +   +A      A+ YAR R   G  + D  +++  +AD   ++ A  ++ 
Sbjct: 239 DRGRLHLSALACGMAHRLITDAVAYARERRQFGQPIADFQLIQAMLADSQTELYAGLSMV 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              A  +D AK   +      ++A   K +C +M   V   A++  GG+GY+ E  + R 
Sbjct: 299 RDCARRYD-AKPAGKPDHEVGMLASCAKLFCTEMVGRVADRAVQIHGGAGYVAEYKVERF 357

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           YR+     +  G+     L +   L +
Sbjct: 358 YRDVRLLRLYEGTTQIQQLIIAKHLLR 384


>gi|26341718|dbj|BAC34521.1| unnamed protein product [Mus musculus]
          Length = 413

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 60  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 118 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 165 SDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISCIVVEKGT 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 223 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVPNRIGTEGQGFLIAMKGLNGGRINVASCS 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 283 LGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +   A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 339 --QEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 396

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 397 GSNEVMRMLISRNLLQ 412


>gi|62289010|ref|YP_220803.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|161618010|ref|YP_001591897.1| isovaleryl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|189023285|ref|YP_001934053.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus S19]
 gi|260546302|ref|ZP_05822042.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260567332|ref|ZP_05837802.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755876|ref|ZP_05868224.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260760825|ref|ZP_05873168.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260884900|ref|ZP_05896514.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261221250|ref|ZP_05935531.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261314761|ref|ZP_05953958.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261316680|ref|ZP_05955877.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261324141|ref|ZP_05963338.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261751345|ref|ZP_05995054.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261755910|ref|ZP_05999619.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261759135|ref|ZP_06002844.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265987750|ref|ZP_06100307.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|265993966|ref|ZP_06106523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265997211|ref|ZP_06109768.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|294851427|ref|ZP_06792100.1| isovaleryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|297247429|ref|ZP_06931147.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62195142|gb|AAX73442.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|161334821|gb|ABX61126.1| Isovaleryl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|189018857|gb|ACD71579.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus S19]
 gi|260096409|gb|EEW80285.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260156850|gb|EEW91930.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260671257|gb|EEX58078.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260675984|gb|EEX62805.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260874428|gb|EEX81497.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260919834|gb|EEX86487.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|261295903|gb|EEX99399.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261300121|gb|EEY03618.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261303787|gb|EEY07284.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261739119|gb|EEY27115.1| isovaleryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261741098|gb|EEY29024.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261745663|gb|EEY33589.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|262551679|gb|EEZ07669.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|262764947|gb|EEZ10868.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|264659947|gb|EEZ30208.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294820016|gb|EFG37015.1| isovaleryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|297174598|gb|EFH33945.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 392

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|265765878|ref|ZP_06093919.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16]
 gi|263253546|gb|EEZ25011.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16]
          Length = 567

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/508 (19%), Positives = 185/508 (36%), Gaps = 60/508 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE          A   ++  P            ++V +       L      GL  
Sbjct: 55  LEIVGEICG-DIIAPNAEGVDHEGPVCAD--------NRVTYASGTTRNLDACRKAGLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +       I AA +   +     +L       A  +         + +  +
Sbjct: 106 MAMPRRFGGLNFPITPYIMAADIVSRSDAGFENLW-GLQDCAETIYEFANEEQKQRYITR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           +   E               + + LTE   G+D+ ++  +      D  + L+G K F++
Sbjct: 165 VCQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +D  ++LA+ E G      +   + D    G+  +R++NK+G + + T EL + N  
Sbjct: 211 NGDADIHLVLARSEEGTHDGRGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  EA+ YA+ R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE-------AAYARIMA 397
           +   ++ +   + A+ +L +  A   D          E K   EE       A  A    
Sbjct: 331 VAEILSLMKAKLDASRSLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  
Sbjct: 391 PLGKGMGSEFANQNAYDCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRY 450

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILR----------DSISLCKEDKGL---ARFL 504
           +  G  L  ++       +    + +   L+            I+  K+ + L   AR L
Sbjct: 451 VTTGAYL-ARIQEYENMPVAPELEGLQNRLKSMASKYAACVTQITEAKDQELLDFCARRL 509

Query: 505 TEKIALASSAAALYRAGMNDIADVFLEN 532
            E  A       + +      +D+F E+
Sbjct: 510 VEMAAHIIMGHLMVQDASK--SDLFSES 535


>gi|197295451|ref|YP_002153992.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|195944930|emb|CAR57542.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 596

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 101/508 (19%), Positives = 192/508 (37%), Gaps = 65/508 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLDESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGEAFRQFVEGGWQGLQHPAEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + +   + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALLAEIGDTVT 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLT 505
           + GK        + S+  + +  AR L 
Sbjct: 475 ALGKLDGA---AAASMKAQLEKGARSLA 499


>gi|308490217|ref|XP_003107301.1| CRE-ACDH-9 protein [Caenorhabditis remanei]
 gi|308252407|gb|EFO96359.1| CRE-ACDH-9 protein [Caenorhabditis remanei]
          Length = 409

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 132/371 (35%), Gaps = 27/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK    P    +L+++   G                + H         M  +     +
Sbjct: 52  EWDKQGELPM--DVLKKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYI 109

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S     A M+      ++ +D  P              M   +      LTE   G+D A
Sbjct: 110 SIHNMCAWMLDTYGPDKLKEDLLPD-------------MALFNKLGSYCLTEPDAGSDAA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
           +I +   K  D  Y ++G K F+S    SD + ++ + +G   G   +  L+ +    G 
Sbjct: 157 SIRTTATKKGD-YYVVNGSKAFISGAGTSDNYFVMMRQDGAAPGAKGIFCLMIENGTEGF 215

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM--KILIYLDSAIMSVSG 327
            + + ++K+G  S  T  L F +    +   +     G    M       ++ A  S+  
Sbjct: 216 SFGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRVNIASCSLGA 275

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + SL  AI + + R   G  L D    +  +A++A  +  +  +    A   D      
Sbjct: 276 AQRSLDLAIEHLKCRKQFGKTLSDFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDLPEK 335

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                   +  + K         V+  A++  GG G++++  I ++ R+   + IL G+ 
Sbjct: 336 VA------LCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPIQQYLRDIRVHQILEGTN 389

Query: 448 NAMVLDVLNLL 458
             M L +   L
Sbjct: 390 EMMRLLISRDL 400


>gi|109098063|ref|XP_001096856.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Macaca mulatta]
          Length = 621

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 84/483 (17%), Positives = 165/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGLSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A++ S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 190 ASVQSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+        K+ +  L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPV---ENILGEVGGGFKVAMNILNSGRF 305

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSAVAGMLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY ++    R  R++ 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTKDYPYERILRDTR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVI-TILRDSISLCKE 496
              I  G+   + + + L  L+    +        +Q   ++  + I   LRDS+    +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTARIREFKQAKVTTVMETIGRKLRDSLGRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 481 LGLTGNHGVVHPSLADSANKFEENTYYFGQTVETLLLRFGKTIMEEQLVLKRVANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|311695430|gb|ADP98303.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 386

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 140/377 (37%), Gaps = 22/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+     P  H L ++  + G+        +  +    ++ + AA    MA
Sbjct: 20  KEINPHCDEWEAAGEFP-IHELFKKLGNLGILGIQKPEEYGGMGLDYSYNLVAAEELGMA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L     T     A+            +  S E   +  AP     +   +G++E
Sbjct: 79  HCGGVPLAIGVQTDMCTPAI-----------SRFGSDELKRSFLAPAIAGDMVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A + +  +K  D         W  +SP SD   +LA             ++  
Sbjct: 128 VGAGSDVAGMKTTARKDGDDYIINGSKMWITNSPKSDFICLLANTSDDKPHKNKSLIIVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+ +    NK+G RS+ T ++ F +        +    TG +  M       +  A
Sbjct: 188 TKTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIGAEGTGFMMQMLQFQEERIWGA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  +   + + I Y R R   G  LID  V+   +A++  ++ A  AL+++      
Sbjct: 248 ANVIKALENCITKTIEYCRERKTFGQPLIDNQVIHFRLAELQTEVEALRALTYQACELHV 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K  +        +A + K    ++   V    ++  GG+GY+ +  I+R +R+    S
Sbjct: 308 EGKDVTR-------LASMAKLKAGRLGREVTDSCLQYWGGNGYMWDNPISRAHRDVRLVS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +  ++
Sbjct: 361 IGGGADEIMLGIICKMM 377


>gi|15789868|ref|NP_279692.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10580266|gb|AAG19172.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 397

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 150/402 (37%), Gaps = 31/402 (7%)

Query: 63  EYVLSCTAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++  S    ++A M A +   ++          DK +  PA   L+      GL    + 
Sbjct: 19  DFTRSAEHDQIAEMVAEFVDEEVKPRAAT---IDKADEFPA--DLVAEMSDLGLMGMPFP 73

Query: 122 RSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             ++        +    + +   +      + + +  + +MV    +     D+      
Sbjct: 74  EEYDGAGLDYHTYATALSEIARGSGGLGTVVAAHTSLAGNMVYEYGSDDQKHDYL----- 128

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                   AP+ +        L+E   G+D+ A+ +  Q+  D         W  +  ++
Sbjct: 129 --------APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDAYVISGEKLWISNGSVA 180

Query: 241 DAFIMLAQVEGRVGCFLVPRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
           D   + A+ +   G   +   +      +G      ++K+G++   T EL F +      
Sbjct: 181 DTVTVFAKTDPDAGHRGISSFIVRPAEDDGFIVAGTEDKLGDKGCPTAELRFDDMRVPAD 240

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG+         +      +  A  SV   R +L +A  YA+ R   G  + D   ++
Sbjct: 241 RLLGEEGDGFKHALETLNGGRITIAARSVGLARAALDDAREYAQDRDQFGQAISDFQTIQ 300

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+   + AA  L  + A+     +S  +EAA A       K +  +++  V  E +
Sbjct: 301 HKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQA-------KLYASEISREVANEGI 353

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY ++    R+YR++  N I  G+   +   + N L
Sbjct: 354 QIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 395


>gi|289643724|ref|ZP_06475834.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506448|gb|EFD27437.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 386

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 126/378 (33%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  PA        +    H      S+                       +
Sbjct: 31  PYATEVDEAERFPA--EARDALVKADFHAVHIPESYGGQGADAVSACIVIEEVARVCASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +   +  + L     + +    +I +                 I   L+E+  G
Sbjct: 89  SLIPAVNKLGSQPIILSADEELKRTVLSEIAAG--------------AGISYALSEREAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           +D A++ ++ Q   D         W  ++  S  + ++A            +   +    
Sbjct: 135 SDTASMRTRAQLDGDHWVLNGTKAWITNAGESTWYTVMAVSNPNADKPSRGISAFVVHRD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G      + K+G + + T E+ F N       ++G+                   A  
Sbjct: 195 DPGFSVGHKERKLGIKGSPTREIHFENCTIPANRIIGEPGTGLKTALATLDHTRPTIAAQ 254

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L  A+ Y R R   G  + D   ++  +A++A+ I AA  L +  A + +  
Sbjct: 255 ALGIAQGALDAAVDYVRERRQFGQRIGDFQGIQFILAELAMKIEAARHLVYASAATTERG 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S         +   K +   +A +V  +A++  GG+GY  +  + R  R++    I 
Sbjct: 315 EPES------GFRSAAAKTFASDVAMSVTVDAVQLFGGAGYTRDFPVERMLRDAKITQIY 368

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+   + + +   L +G
Sbjct: 369 EGTNQILRMVMARHLLRG 386


>gi|163856823|ref|YP_001631121.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163260551|emb|CAP42853.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 137/407 (33%), Gaps = 30/407 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +  L+   +  A+ A ++   +L  +      WD     P       R+   G       
Sbjct: 2   DLELTDEQRAFAQAARDFAQGELAPHAAH---WDAEGIFP--REAFARAGELGFCAIYAA 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    ++    +  MV     P + + W P + S 
Sbjct: 57  EDIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMVGQWGQPALREAWGPLLASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D  +++++ Q+  D         +      +D
Sbjct: 117 -------------QKLASYCLTEPGAGSDAGSLSTRAQRDGDHYVLNGAKAFISGGGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+  G  G   V          G+ Y R + K+G  S +T  + F N        
Sbjct: 164 LLVVMARTGGE-GPGGVSAFAVPADSAGISYGRKEEKMGWNSQSTRPITFENVRVPAANM 222

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++    SV   + +L  A  Y   R   G  L +   ++  
Sbjct: 223 LGSEGEGFKIAMKGLDGGRINIGTCSVGAGQGALDAARRYMDERRQFGRRLAEFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  +    A   D           A     + K +   M   V  +A + 
Sbjct: 283 LADMATHLVAARQMVRLAACKLDAGSPD------AGTYCAMAKRFATDMGFQVCLDAQQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
            GG GY+ +  + R  R++  + IL G+   M + V   LLEKG ++
Sbjct: 337 HGGYGYLRDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLEKGADI 383


>gi|114589061|ref|XP_001139761.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 633

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 97  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 154

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 155 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 201

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 202 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 260

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 261 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPV---ENILGEVGDGFKVAMNILNSGRF 317

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 318 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 377

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++ 
Sbjct: 378 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTR 432

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    V   LRDS+    +
Sbjct: 433 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVD 492

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 493 LGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINL 552

Query: 542 HCM 544
           + M
Sbjct: 553 YGM 555


>gi|315503042|ref|YP_004081929.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409661|gb|ADU07778.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 377

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 136/358 (37%), Gaps = 31/358 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            R +   GL     D  +       ++ H +    L           +   +    +  L
Sbjct: 43  WRAAGAAGLLGFFVDERYGGAGVTDRRFHAVLTEELARAGASGPAFGLHNDIIGPYLTDL 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            TT    + W P   S E             +   + ++E   G+D+A IT+   +  D 
Sbjct: 103 -TTEEQKQRWLPGFCSGE-------------IVTAIAMSEPGAGSDLAGITTTAVRDGDD 148

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K F+S+ + +D  +++A+ +   G   +  L+ +    G    R  +K+G ++
Sbjct: 149 -WVLNGQKTFISNGILADLVVVVARTDPGAGRRGISLLVVERGMPGFERGRNLDKLGQKA 207

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL FS+       LLG        +     L  L  A+ +++G     A+ + Y +
Sbjct: 208 QDTAELFFSDVRVPAANLLGAEGEGFAYLMRNLPLERLSIAVAALAGAETVFAQTLDYCK 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +      +  +A++A ++            + D               A + 
Sbjct: 268 QRQAFGRPIGSFQHNRFVLAELATELRLGRVFVDNCLVAPD----------LTAETAAMA 317

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K+WC ++   V+   ++  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 318 KWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLDARVQTIYGGTTEIMKEVIGRSL 375


>gi|76801956|ref|YP_326964.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160]
 gi|76557821|emb|CAI49405.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160]
          Length = 379

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 150/398 (37%), Gaps = 32/398 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             +    +E     N   P    +   GE       +P    L +++             
Sbjct: 10  EAIRDAVREFGE--NEIKPVAEEHDRKGE-------YPL--ELRKKAAEYDFVAPSIPME 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           ++     +            A    G  +  +    +M+       + ++W PK+ + E 
Sbjct: 59  YDGAGMDKISSTIVTEELWRADPGIGSAIGSAGFGTNMILEFGDDWMKEEWLPKVANGE- 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                        A    ++E   G+++A I +  ++  DG        W  +  ++D  
Sbjct: 118 ------------TASCSMISEPAHGSNVAGIETVAEEDGDGYVLNGSKMWITNGTVADVG 165

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           +++A+     G   +   L +   +G+   ++ NK+G R++   E+   +       ++G
Sbjct: 166 VLMAKTSPGEGHQGITAFLVEMDRDGVTTDKIDNKLGIRASDLAEVVVDDVRVPEENVIG 225

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +++     + +         A  +V   + +L  AI YA +R   G  + +   ++  +A
Sbjct: 226 EVDKGFYQLMEFFASGRTSVAAQAVGAAQGALDAAIEYADQREQFGQKINEFQAIEHKLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  + AA +L++R A   ++        + A   + + K +  +MA  V  E ++  G
Sbjct: 286 EMATQVEAARSLTYRAATEVEQNNQ-----SVAAQFSSMAKLFASEMAVDVADEGIQVHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GSGY+ +    R+YR++    I  G+       + + L
Sbjct: 341 GSGYVTDYPAERYYRDARITKIYEGTSEIQKNIIADQL 378


>gi|319650452|ref|ZP_08004593.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317397863|gb|EFV78560.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 594

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/454 (18%), Positives = 166/454 (36%), Gaps = 48/454 (10%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H       LL+++   GL  +     +  +   +      A     A   +   
Sbjct: 53  IEHLENHEFDRSVKLLKQAGDLGLLGADVPEEYGGLALDKVSSALIAEKMARAGGFSISH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L       + + P + + E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGNEEQKQKYLPALATGE-------------KLAAYALTEPSSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +  ++G  Y L+G K W  ++  +D F++ A+++G          + +    G
Sbjct: 160 LGAKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEH----FSAFIVEREFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +     + K+G +S++T  L   +       LLG+         ++  +      + +V 
Sbjct: 216 VSVGAEEKKMGIKSSSTRTLILEDAQVPKENLLGEFGKGHVIAFNILNIGRYKLGVGAVG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
           G + +   A+ YA++R      +    + K  +  +A  I AA +  +R    F++    
Sbjct: 276 GAKRAFELAVQYAKQRQQFKTPISQFNLTKEKLGTMASKIYAAESAVYRTVGLFEDRMSK 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    K  ++  A   I   + K++  ++   V+ E ++  GG G++ E  I R Y
Sbjct: 336 LSDEEVKDGKEVAKSIAEYAIECSMNKFFNTEVLDYVVDEGVQIHGGYGFMAEYEIERAY 395

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           R+S  N I  G+          LL  GT L + L   L   L    + +   L   +   
Sbjct: 396 RDSRINRIFEGTNEI-----NRLLVPGTYLRKALKGEL--PLFQKAQALQEELMMLMPEE 448

Query: 495 KEDKGLARFL-----TEKIALASSAAALYRAGMN 523
             D+ LA+        +KI L ++  A  + G  
Sbjct: 449 PGDEPLAQEKYLVKNAKKIGLLAAGLAAQKYGKA 482


>gi|311743568|ref|ZP_07717374.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312698|gb|EFQ82609.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 387

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 133/401 (33%), Gaps = 26/401 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + LS   +   R A     + +   P     D+    P         +    H       
Sbjct: 5   FALSEEHR-AIREAVRAVAE-NKIAPWAAEVDEDARFP--REAADALLASDFHAPHVPEE 60

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +          +          + +  + + +   +  V +    ++   +  ++   E 
Sbjct: 61  YGGAGADALATVLVIEEVARVCVSSSLIPAVNKLGSLPVQIGGDEQIKATYLGRLARGE- 119

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                             L+E   G+D A   ++  +  D        +W  ++  S+ +
Sbjct: 120 ------------GGFSYCLSEPDAGSDAANQKTRAVRDGDDWVLNGVKRWITNAGESEYY 167

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
            +LAQ +       +   + + S  G+ +   + K+G + + T E+   +       ++G
Sbjct: 168 TVLAQTDPEKRTKGITAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYLDHVRIPGDRIIG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           ++               +  A  +V   + +L  A+ Y + R   G  + +   ++  +A
Sbjct: 228 EVGQGFALAMQTLDHTRVTIAAQAVGVAQGALDHALGYVQERRQFGKAIAEFQGIEFMLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + I AA  L++  A   +         A         K +   +A  V  +A++ +G
Sbjct: 288 DMGMKIEAARQLTYAAAGRSERGD------ADLTFFGAAAKAFASDVAMQVTVDAVQLLG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           G GY  +  + R  R++    I  G+     + +   L  G
Sbjct: 342 GYGYTRDYPVERMMRDAKITQIYEGTNQVQRVVMGRQLLAG 382


>gi|56695494|ref|YP_165842.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56677231|gb|AAV93897.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 145/415 (34%), Gaps = 44/415 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
            + V  E  +  E        EL        P +  +   G   D+           R++
Sbjct: 8   AAWVTDEHRMFAEAAGRFLDDEL-------VPNIETWVDNGV-VDR--------DFWRKA 51

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        F  V                ++ +AG            +    +   
Sbjct: 52  GETGLMAGAIPEEFGGVGGGMGFDAVTI-YEQTSRGDAGWGYGIQSIVTHYITAYGSEEQ 110

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W P + S E                 + +TE   G+D+ A+ +  +K  +  Y ++G
Sbjct: 111 KAKWLPGLASGEM-------------VGAIAMTEPGTGSDLQAVRTTAEKDGN-SYRING 156

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++   +D  I++A+ +  +G   V  + LE     G    R   K+G ++N T E
Sbjct: 157 SKIFITNGQTADLIIVVAKTDKTLGSKGVSLIALETEGAEGFRRGRNLKKLGMKANDTAE 216

Query: 289 LEFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F +    +          G  + MK L    L   IM++  +  +LAE + Y + R  
Sbjct: 217 LFFEDVKVPMTNLIGPEEGHGFYQLMKQLPWERLTIGIMALGAIDFALAETVKYVQERKA 276

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++D    +  +A+         +         +  +  +         A + KY+ 
Sbjct: 277 FGQRVMDFQNTRFKLAECKTKAEVLRSFVNDCIGRLEAGQLDAA-------TASMVKYYG 329

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            ++   ++ E ++  GG G++ E  IAR Y ++    I  G+   M   +   ++
Sbjct: 330 SEVQNEIMHECLQLFGGYGFMMEYPIARLYADARVQMIYGGTNEVMKELIARSMD 384


>gi|299069056|emb|CBJ40307.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 392

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 132/358 (36%), Gaps = 26/358 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHK 172
           GL       ++  +    A +                +   +V   S  + +  T     
Sbjct: 48  GLFGLSIPEAYGGIGLSMAQECEVVYDLGHTSFAFRSVFGTNVGIGSQGILMDGTEAQKA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P+I S E             + I   LTE   G+D AA+ ++     D        +
Sbjct: 108 AYLPRIASGE-------------LIISFALTEPNAGSDAAALQTRATPDGDHYVINGTKR 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++   
Sbjct: 155 FITNAPRAGAFTLMART-GAEGAGGISAFIVPADTPGITLGKPDKKMGQRGTKTCDVMLD 213

Query: 293 NTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
           N        +      G    MK+   LD   + +S +   +A      A+ YAR R   
Sbjct: 214 NVRVPAANIIGGVAGQGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYARERRQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D  +++  +AD   ++ A  ++    A+ +D AK   +      ++A   K +C 
Sbjct: 271 GQPIADFQLIQAMLADSQTELYAGLSMVRDCAHRYD-AKPAGKPDHEVSMLASCAKLFCT 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +M   V   A++  GG+GY+ E  + R YR+     +  G+     L +   L +   
Sbjct: 330 EMVGRVADRAVQIHGGAGYVAEYKVERFYRDVRLLRLYEGTTQIQQLIIAKHLLRDGA 387


>gi|149191211|ref|ZP_01869468.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
 gi|148834960|gb|EDL51940.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1]
          Length = 389

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 132/378 (34%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P   R D     P  + L       GL     D  +        AH +    +   
Sbjct: 29  ERIAPIAARVDADNAFP--NHLWPELGEMGLLGVTVDEQYGGAAMGYLAHVVALEEVSRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +           + P++    +                L ++
Sbjct: 87  SASIALSYGAHSNLCVNQIFRNGNDAQRAKYLPRLVDGTH-------------IGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + ++  D         W  + P +D  ++ A+ E       +   + 
Sbjct: 134 EANAGSDVISMQLRAERHGDHFVLNGCKMWITNGPDADVVVVYAKTEPSAAQHGITAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           +    G  + +  +K+G R + T EL F N    L   L      VE +        +  
Sbjct: 194 EKQFEGFSHAQKLDKLGMRGSNTCELVFQNCKVPLENVLGEINHGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+     AA A  + +A++ 
Sbjct: 254 AAGPLGIMQACLDLVVPYVHERKQFGRSIGEFQLVQAKLADMYTRCNAARAYLYAVASAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   +++A           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGEITRKDSAG-------VILYNAELATQMALDAIQLLGGNGYINEYAAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|21361497|ref|NP_054768.2| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Homo sapiens]
 gi|114589055|ref|XP_001140184.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
 gi|114589057|ref|XP_001140269.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 6 [Pan troglodytes]
 gi|32469596|sp|Q9H845|ACAD9_HUMAN RecName: Full=Acyl-CoA dehydrogenase family member 9,
           mitochondrial; Short=ACAD-9; Flags: Precursor
 gi|10436258|dbj|BAB14775.1| unnamed protein product [Homo sapiens]
 gi|14044102|gb|AAH07970.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Homo sapiens]
 gi|15426498|gb|AAH13354.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Homo sapiens]
 gi|119599701|gb|EAW79295.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Homo
           sapiens]
 gi|119599702|gb|EAW79296.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Homo
           sapiens]
 gi|123993681|gb|ABM84442.1| acyl-Coenzyme A dehydrogenase family, member 9 [synthetic
           construct]
 gi|123999971|gb|ABM87494.1| acyl-Coenzyme A dehydrogenase family, member 9 [synthetic
           construct]
          Length = 621

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 190 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPV---ENILGEVGDGFKVAMNILNSGRF 305

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++ 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    V   LRDS+    +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 481 LGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|222109787|ref|YP_002552051.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221729231|gb|ACM32051.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 598

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 82/445 (18%), Positives = 158/445 (35%), Gaps = 64/445 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G      D ++          +      ++        M P 
Sbjct: 74  EVTTPKGFKEAYAQYVEGGWAALSCDTAYGGQGLP--FVMNQCLYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    T    K + PK+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAHGTDEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED--- 264
           + ++ +  +DG Y ++G+K F+S+   +       ++LA+  +   G   +   +     
Sbjct: 179 LRTKAEPQADGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGSKGISLFVVPKFK 238

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
                  G  N +    L++K+G   NAT ++      G L+G+ N     +  M     
Sbjct: 239 VNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPNKGLAAMFVMMNAAR 298

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           L     S+    V+   A+ YA+ R                  +I  P +++ +      
Sbjct: 299 LGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVHPDVRKMLLTAKAY 358

Query: 366 IAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECI 419
              A AL        D+A S  +E           ++ PI K +            M+  
Sbjct: 359 AEGARALQIFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITDNGHIATNACMQVF 418

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG G+I+E  + +  R++  N I  G+     LD+L     G N             G++
Sbjct: 419 GGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN-------------GAT 465

Query: 480 GKKVITILRDSISLCKEDKGLARFL 504
            KK   ++   ++    ++ +A F+
Sbjct: 466 LKKFGKLVGQLVAEEGVNEKMAEFI 490


>gi|149375646|ref|ZP_01893415.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149360048|gb|EDM48503.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 606

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 86/447 (19%), Positives = 162/447 (36%), Gaps = 57/447 (12%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E  +      +P   +    G + D  +V     +    ++    G      
Sbjct: 37  DIVDAILNECGKFCEAVLSPLYQSGDEEGCKLDNGEVITPKGYREAYQQYAQGGWQGLSA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +       +  +    +   A          S+ + + + L  +    + +   +  
Sbjct: 97  PEEYGGQGLPASMGLFKQEMMGTANWSFSMYPGLSMGAMNTIFLHGSDDQKQTYLVPLTE 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + GTD+  + ++     DG + LSG K F+SS   
Sbjct: 157 GRWGGT-------------MCLTEPQCGTDLGQVKTKAAPQEDGSFKLSGTKIFISSGDH 203

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+LL DG+      NG+    L+ K+G +++
Sbjct: 204 DLTENIVHIVLARLPDAPKGTRGISLFIVPKLLPDGNGGVGEANGVTCGSLEKKMGIKAS 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH- 343
           AT  + F    GFL+G  N     +        + +AI  V    +S   A+ YAR R  
Sbjct: 264 ATCVMNFDEATGFLIGPENEGLNCMFTFMNTARIGTAIQGVGPAELSYQWALDYARERRS 323

Query: 344 ---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSR 386
              +SG          LI    ++R +           A+ +  A   D       A  +
Sbjct: 324 MRALSGKKEPDEVADSLIHHADVRRMLLTQKAVAEGGRAMLYYAARLADHMVEGHTAGDQ 383

Query: 387 SEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +  AY      + PI K +  ++        ++  GG GYI E  + +  R++   ++ 
Sbjct: 384 KKADAYDDKLGFLTPILKGFLTELGNEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLY 443

Query: 444 LGSGNAMVLDVLN----LLEKGTNLFE 466
            G+     LD+L     L+ +G  + E
Sbjct: 444 EGTTGIQALDLLGRKVLLMTQGGAVRE 470


>gi|86139098|ref|ZP_01057669.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824329|gb|EAQ44533.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 385

 Score =  260 bits (665), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 134/377 (35%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE 147
           P  ERW +            ++   G+ C+     +  +     H+   A   Y  A   
Sbjct: 30  PHEERWQQQGHID--RDFWNKAGEIGILCASAPEEYGGMGGDFRHEAVIATEQYRAAGFS 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +      W PK+ S E                 + +TE   
Sbjct: 88  GFGNSVHSQICAGYILDYGSEEQKMRWLPKMASGEM-------------VCAIAMTEPST 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED-G 265
           G+D+  I +  +   +  Y LSG K F+++   +D  I++A+ +  +G   +  ++ +  
Sbjct: 135 GSDLQNIKTTARLEGNE-YVLSGSKTFITNGQQADLIIVVAKTDTSLGAKGISLMMVETA 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSA 321
              G    R   K+G +S  T EL F N        L      G  + MK L    L  A
Sbjct: 194 EAEGFARGRNLEKLGLKSQDTSELFFDNVRLPPENLLGGTEGQGFYQLMKSLPQERLVVA 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +   + M  +L E + Y   R   G  L++    +  +A++      A           D
Sbjct: 254 LGGAAAMEKALEETVAYTSERRAFGKPLLEMQNTRFKLAEVKTVAHIARVF-------LD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +  ++          A + K+W  +M    I E ++  GG GY+ E  I+  Y ++    
Sbjct: 307 DCVAKHLRGELDATTASMAKWWVTQMQCDTIDECLQLFGGYGYMSEYPISTMYADARVQK 366

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M   +   L
Sbjct: 367 IYGGSNEIMKELIARSL 383


>gi|225626568|ref|ZP_03784607.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|225618225|gb|EEH15268.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
          Length = 397

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 20  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 75

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 76  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 134

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 135 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 182

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 183 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 242

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 243 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 303 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 356 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 397


>gi|317123539|ref|YP_004097651.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587627|gb|ADU46924.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 383

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 144/383 (37%), Gaps = 38/383 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           ++  +    +R + V+      A++ R    G         +  +               
Sbjct: 23  EVVPHRAEWDRRESVDT-----AIIPRLGEIGFFGLTIPEEYGGLGGDYITYCIGMEELG 77

Query: 143 MAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            A      ++S S+     ++    T      + P I                ++    G
Sbjct: 78  RADSSVRGIVSVSMGLVGKVILSHGTEEQKHQYLPGI-------------ANGTLLGCFG 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           LTE   G+D   + ++ ++     Y ++G K F+++   +D  ++ A+  G  G   V  
Sbjct: 125 LTEPDNGSDPGNLKTRARRDGSD-YVINGQKIFITNGTWADVCLVFART-GGDGPKGVSA 182

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            L      G   + +  K+G R  AT E+  ++        L       E  KI ++ LD
Sbjct: 183 FLVPTDSPGFEAREIHGKLGLRGQATAEIFLTDVRVPESARLG---AEGEGFKIAMHSLD 239

Query: 320 SAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +SV        +  L E + Y   R   G  +    +++  IA+I++D+ AA  L++
Sbjct: 240 KGRVSVGAGCTGIIQGCLEEVVKYTTERKQFGRPIASFQLIQEIIAEISVDVDAARLLTW 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A+  +  +    EA+ A       KY+  + A      A++  GG GY++E  I ++ 
Sbjct: 300 RAADLIERGEPFGVEASKA-------KYFASEAAVRAANGALQAFGGYGYVDEYPIQKYM 352

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           R++   ++  G+     L +   
Sbjct: 353 RDARVMTLYEGTSQIQKLLIGRA 375


>gi|170062282|ref|XP_001866600.1| crotonobetainyl-CoA dehydrogenase [Culex quinquefasciatus]
 gi|167880242|gb|EDS43625.1| crotonobetainyl-CoA dehydrogenase [Culex quinquefasciatus]
          Length = 598

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/486 (19%), Positives = 189/486 (38%), Gaps = 47/486 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCS--IWDR---SFEPVVRKQAHKIRAARLYLMAQLE 147
               V+  P +         + +       DR    ++PV  ++  K   A +  M  + 
Sbjct: 50  EIQPVQVFP-YPEAADAEQKEFIRSLREPVDRFFAEYDPVESEKLGKPSDAVMEAMWDMG 108

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKR 206
              LM+P            +          ++  +       PM  T   I    LTE  
Sbjct: 109 CFGLMAPEEYGGLNPVQHRSIGWKGVL---LYGTDEQKKKYLPMVTTGKTIAAFALTEPS 165

Query: 207 GGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VP 259
            G+D  +I ++  K + G  Y ++G K ++S   +SD   + AQ    + + G     V 
Sbjct: 166 SGSDAGSIRTRAVKSACGKFYTMNGSKIWISGGGISDILTVFAQTEVDDPKTGKKRDKVT 225

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-L 318
             + + S  G+     + K+G R + T E+ F +    +    NV  G     K+ +  L
Sbjct: 226 AFIVERSFGGVTSGPAEEKMGIRCSNTTEVFFDDVKIPV---ENVLGGEGNGFKVAMNIL 282

Query: 319 DSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++    ++G     MR+ +A+A  +A  R   G  + +   ++  +A +A+      ++ 
Sbjct: 283 NNGRFGMAGTLAGTMRICIAKATEHANNRVQFGKKIKEFGNVQEKLARMAMLQYVTQSMG 342

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           F +A + D        A    + A I+K +  + A  V  EA++ +GG+G++    + + 
Sbjct: 343 FMVAGNMDNG------AKDYHLEAAISKIFASEAAWQVCDEAIQILGGNGFMTASGLEKI 396

Query: 434 YRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRD 489
            R+     I  G+ + + L V L  ++   +  ++L   F     +LG   K+       
Sbjct: 397 LRDIRIYRIFEGANDILRLFVALTGIQYAGSHLKELQLAFKNPTANLGLIFKEGSRRAAR 456

Query: 490 SIS---------LCKEDKGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNC 538
           +I          +  + K  A+F  E I + S A  + L + G   + + FL  R  D+ 
Sbjct: 457 TIGIGGADLSQYVAPQLKESAQFCAESIDMFSVAVESLLIKYGKRIVDEQFLLIRLADSA 516

Query: 539 HSTHCM 544
              + M
Sbjct: 517 IDIYAM 522


>gi|115374699|ref|ZP_01461976.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|310822702|ref|YP_003955060.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115368270|gb|EAU67228.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309395774|gb|ADO73233.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 614

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 108/565 (19%), Positives = 205/565 (36%), Gaps = 91/565 (16%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKELELLG--EYVLSCTAQELA-RMANYNTPQLHAY- 87
            G+N Y +D  L  +            E  G  + V            A     + + + 
Sbjct: 3   AGINHYKTD--LREIFFTL-------FEQFGLSQVVGQAPFDAWGPEEAKAVLHETYRFS 53

Query: 88  -----------GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
                         G R +   V     +    ++    G       +           +
Sbjct: 54  KDVLGPLNASGDREGCRVENGTVIAPSGFKDAWKKLYEQGFKTVGVSQEHGGQGAPMMLQ 113

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +    +   A          +  +A ++A   TP     +  ++ +  +  T        
Sbjct: 114 MAVEEMLCGANAAFNMYPGLAYGAAELIAECGTPEQKHHYVERMLNGTWGGT-------- 165

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE + G+D+ A  +  ++ +DG Y + G K F+S+   D       ++LA+V
Sbjct: 166 -----MCLTEPQAGSDVGAAKTTARRNADGTYNIRGTKIFISAGDHDLAENIIHLVLARV 220

Query: 250 EG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEF---SNTF 295
           EG       +  F+VP+L  +        N +    +++K+G   ++T  L F       
Sbjct: 221 EGAAVGTKGLSLFIVPKLRINKDGSAGPSNDVALGSIEHKMGINGSSTCVLNFGENDACV 280

Query: 296 GFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------- 347
           G L+G   +V    +  M     +   I  V+    +   A+ YA+ R   G        
Sbjct: 281 GELVGGVEHVGMSQMFKMMNGARIAVGIQGVALASAAYFNALDYAKERKQGGSFTKWKDP 340

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----RSEEAAY----AR 394
                 +I+ P ++R + +I   +    AL F+LA   D+AK       ++AAY      
Sbjct: 341 ASPRVPIIEHPDVRRMLLEIKSHVEGIRALIFKLAMHTDKAKQLAGKDDDKAAYHRGQVE 400

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K +    A  + A+A++  GG+G+ ++  + ++ R+S   SI  G+ +   +D+
Sbjct: 401 VLTPLVKAYGSDQAFRLCAQAIQIYGGAGFCQDYPVEQYCRDSKIFSIYEGTNHIQAMDL 460

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           +    K        F    +D+G      I   RD  +   E K LA     +  L +SA
Sbjct: 461 VG--RKLGQAGGANFQQFMEDVG----GFIEANRDHKTFGTEVKVLA---AAQEGLMASA 511

Query: 515 AALYRAGMNDIADVFL---ENRFLD 536
            A+     +      +    NRFL 
Sbjct: 512 MAVLGWSQDPAKTQLIPLSANRFLQ 536


>gi|197119936|ref|YP_002140363.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197089296|gb|ACH40567.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 380

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 128/319 (40%), Gaps = 23/319 (7%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A      L+         +    +P + + + P+                + +   +  T
Sbjct: 78  ACASTALLLIAQTDGMLPIIHGGSPELKQRFLPRFAGT------------SKLLTAIAAT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+ A+ ++ +K  D  Y ++G K F+++  ++D  ++ A      G   +   +
Sbjct: 126 EPNAGSDLLAMKTRAEKKGD-RYVINGQKCFITNGSVADVMVVYAYTAPDKGSKGISAFV 184

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLD 319
            +    GL Y R ++K+G R +   EL F N        L    TG    M+ L    + 
Sbjct: 185 VEKGTPGLVYGRNEHKMGMRGSINSELFFENMEIPAENLLGPEGTGFANLMQTLSTNRVF 244

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V   + +L  A+ + R R   G  +     ++  IAD+A  + AA  L+ + A +
Sbjct: 245 CAAQAVGIAQGALDIAMAHCRDRVQFGKPIAHLAPVQFMIADMATKVEAARLLTRQAARA 304

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D           A +   + K +    A +V  +A++ +GGSGY++E  + R  R++  
Sbjct: 305 LDANDKS------AVLYGSMAKTFASDSAMSVTTDAVQVLGGSGYMKENGVERMMRDAKL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     +     L
Sbjct: 359 TQIYTGTNQITRMVAGRAL 377


>gi|315499620|ref|YP_004088423.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417632|gb|ADU14272.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 594

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 180/480 (37%), Gaps = 67/480 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP-------AWHALLRRSIHDGLH 116
            V+    +E A+        L      G++   V            +     + +  G  
Sbjct: 35  DVVQAILEEGAKFTEEVVAPL---NAPGDKEGCVLHPDHSVTAPKGYKEAYLQMVEAGWP 91

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDW 174
               D  +        H +  A   ++    +   M P +T  ++ AL    T  +   +
Sbjct: 92  ALGGDPEYGGQGLP--HVVATAYSEMLTGASSAFAMYPGLTDGAVAALSVGGTDELKALY 149

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ + E+  T             + LTE   GTD+  + S+    SDG Y +SG K +
Sbjct: 150 LPKLIAGEWSGT-------------MNLTEPHCGTDLGLLRSKAVPDSDGTYKISGQKIW 196

Query: 235 LSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S+   D       ++LA++EG       +  FLVP+ + D     G  N L    L++K
Sbjct: 197 ISAGEHDFTGNICHLVLARIEGAPAGVKGISLFLVPKFIPDANGNPGERNSLHCAGLEHK 256

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   N+T  + + +  G+LLG+ +     +  M     L   +  ++    S   A+ +
Sbjct: 257 MGIHGNSTCVMIYEDAKGWLLGNAHEGLKIMFYMMNNARLGVGLQGLAIGHASHVAAVEF 316

Query: 339 ARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           A+ R     +            ++  P ++R + +    +         +A   D AK  
Sbjct: 317 AKDRLQGRALTGPKSPDKPADSILVHPDVRRMLLESRALLEGGRGFLTWVALQADLAKYA 376

Query: 387 SEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +EA       +  ++ P+ K +  +    V  ++M+  GGSG+ E    +++ R+    
Sbjct: 377 EDEATREKANDFLSLLTPVVKAYLTEKGLKVTQDSMQVHGGSGFTEHFPASQYMRDIRIT 436

Query: 441 SILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE----QDLGSSGKKVITILRDSISLC 494
            I  G+     LD++   L  KG       F+ ++    +    S    +  L+D+ +  
Sbjct: 437 LIYEGTNGVQALDLVGRKLPSKGGRAVMAYFAEIDAYVAEHEAGSAATFVKGLKDTKARL 496


>gi|169235589|ref|YP_001688789.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167726655|emb|CAP13441.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 380

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 150/402 (37%), Gaps = 31/402 (7%)

Query: 63  EYVLSCTAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++  S    ++A M A +   ++          DK +  PA   L+      GL    + 
Sbjct: 2   DFTRSAEHDQIAEMVAEFVDEEVKPRAAT---IDKADEFPA--DLVAEMSDLGLMGMPFP 56

Query: 122 RSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             ++        +    + +   +      + + +  + +MV    +     D+      
Sbjct: 57  EEYDGAGLDYHTYATALSEIARGSGGLGTVVAAHTSLAGNMVYEYGSDDQKHDYL----- 111

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                   AP+ +        L+E   G+D+ A+ +  Q+  D         W  +  ++
Sbjct: 112 --------APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDAYVISGEKLWISNGSVA 163

Query: 241 DAFIMLAQVEGRVGCFLVPRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
           D   + A+ +   G   +   +      +G      ++K+G++   T EL F +      
Sbjct: 164 DTVTVFAKTDPDAGHRGISSFIVRPAEDDGFIVAGTEDKLGDKGCPTAELRFDDMRVPAD 223

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG+         +      +  A  SV   R +L +A  YA+ R   G  + D   ++
Sbjct: 224 RLLGEEGDGFKHALETLNGGRITIAARSVGLARAALDDAREYAQDRDQFGQAISDFQTIQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+   + AA  L  + A+     +S  +EAA A       K +  +++  V  E +
Sbjct: 284 HKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQA-------KLYASEISREVANEGI 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY ++    R+YR++  N I  G+   +   + N L
Sbjct: 337 QIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 378


>gi|258541668|ref|YP_003187101.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632746|dbj|BAH98721.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635803|dbj|BAI01772.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638858|dbj|BAI04820.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641912|dbj|BAI07867.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644967|dbj|BAI10915.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648022|dbj|BAI13963.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651075|dbj|BAI17009.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654066|dbj|BAI19993.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
          Length = 380

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 134/378 (35%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  PA   +       GL                                 
Sbjct: 24  PAAEALDREERFPA--EIYEEMGKLGLFGIAVPEELGGPGFDTLTYAVVMEELSRGYASV 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                      +++    TP   K   P I S +               +   +TE   G
Sbjct: 82  ADQCGLVELITTLLVRHGTPEQQK-LLPSIMSMQQK-------------VAYCITEPEAG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD++ I +   K  +G     G  W  ++P++D   +LA+ +   G   +   + D    
Sbjct: 128 TDVSGIRTTAVKDGEGWVLNGGKIWIHNAPVADIGFVLARTDKEAGNRGMSIFIVDLHAK 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     ++K+G R++    L+F +       LLGD+N     +  +     +  A ++V
Sbjct: 188 GVERGPKEHKMGQRASQVGALDFQDVRLGPNALLGDMNRGFHMMMSVLDKGRVGIASLAV 247

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA  R   G  + +   ++  +AD+A DI AA  L +  A   D    
Sbjct: 248 GIAQAGLEAAVEYAGTRKQFGKHISEFQGVQWLLADMAKDIEAARLLVYAAAMKIDHGLD 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +   MA A  A+A++  GGSGYI    + R YR++    I  G
Sbjct: 308 -------ATRSCSMAKCFAGDMAVARTADAVQVFGGSGYIRGFEVERLYRDAKITQIYEG 360

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     + +   L K   
Sbjct: 361 TNQIQRMIIARELLKKGA 378


>gi|238024065|ref|YP_002908297.1| acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
 gi|237878730|gb|ACR31062.1| Acyl-CoA dehydrogenase [Burkholderia glumae BGR1]
          Length = 379

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 132/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    GL   +    +E           A           
Sbjct: 26  PNAAQWDQDGALPDG--VVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGCASC 83

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             LMS  +      +    T      W   + S               +     LTE + 
Sbjct: 84  STLMSVQNSVCCGPILSYGTDAQRDRWLRGLASG-------------RMIGSFCLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++     DG + L G K F+S+   +   I+ A  +  +G   +   +    
Sbjct: 131 GSEANNLRTRAVLK-DGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRGLSAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G    + + K+G R++ T  +   +     + + N+     E +KI +       +  
Sbjct: 190 TPGFQVGKPEKKLGIRASDTCPITLEHC---EIPEENLLGARGEGLKIALSNLEGGRIGI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +  +A  YA  R   G  + +   +   +AD+A  + AA  L    A   
Sbjct: 247 AAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +M+ AV + A++  GG GY+ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|239813462|ref|YP_002942372.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239800039|gb|ACS17106.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 385

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 132/374 (35%), Gaps = 34/374 (9%)

Query: 99  FHPAWHA-------LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH AW         +  ++  +G  C      +        + +                
Sbjct: 29  FHEAWEERGYVDRSVWSKAGENGFLCMALPEDYGGAGADLLYSVIQFEELWARGFTGIGF 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  V    T    + + P++ S E                 + ++E   G+D+
Sbjct: 89  GLHSEIVAPYVLRYGTEAQKQHYLPRLASGEM-------------VGAIAMSEPGAGSDL 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            A+ +   + +DG Y L+G K F+++   +D  I++A+ +   G       L +    G 
Sbjct: 136 QAVKTSAIRQADGSYLLNGSKTFITNGWHADLVIVVAKTDPAAGAKGTSLFLVERGMPGF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL------LGDLNVSTGPVEDMKILIYLDSAIMS 324
              +   K+G ++  T EL F++              LN     + +      L  AI +
Sbjct: 196 EKGKRLKKLGLKAQDTSELFFTDVRLPADALLGDAAQLNRGFVCLMEQLPWERLQIAISA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V+  + ++ + + Y + R V G  +      +  +A++  ++  A     +        K
Sbjct: 256 VAASQAAIDQTVTYVKERKVFGQPVGSYQNTRYTLAELQTEVQVAQVFVDKCIELLMAEK 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   V+   ++  GG G++ E  I R Y ++    I  
Sbjct: 316 LDTATASMA-------KYWTTDLQCKVMDACVQLHGGYGFMWEYPITRAYADARVQRIYG 368

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   +
Sbjct: 369 GTNEIMKEVITRAM 382


>gi|160888726|ref|ZP_02069729.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492]
 gi|270293508|ref|ZP_06199710.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479525|ref|ZP_07938656.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp.
           4_1_36]
 gi|156861625|gb|EDO55056.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492]
 gi|270274975|gb|EFA20835.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316904345|gb|EFV26168.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp.
           4_1_36]
          Length = 568

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 85/447 (19%), Positives = 169/447 (37%), Gaps = 47/447 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P++ + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRVCAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDGRGLSMFIYDKNEGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  +L ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRSLLYQTSRYVDIYKALDDIARE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + A  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYAKLADAFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLFSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+      +  +   S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYSATLRDYEQVPCSEEMQPLMDRIKEMTNKFEA 488

Query: 490 SISLCKEDK------GLARFLTEKIAL 510
             +  KE +       +AR L E  A+
Sbjct: 489 CTNAVKEAQNQELLDFVARRLYEMAAV 515


>gi|297204601|ref|ZP_06921998.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710669|gb|EDY54703.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 380

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 141/381 (37%), Gaps = 28/381 (7%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLY 141
            L    P  ERW++        A    +   GL    +   +     R   +    A   
Sbjct: 21  YLRECAPYAERWERDG--QVSRAAWAAAGKAGLIGWQFPEEYGGQGIRDFRYNAIMAEEM 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                    L   +      +  +TTP     W P + S E                 L 
Sbjct: 79  AATSTVGIGLGLQNDVLPPYLMNLTTPEQKARWLPGVISGE-------------TICALA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D+ AI +  ++  D  + + G K F+++ + +D  I+  + +   G   +  
Sbjct: 126 LSEPSAGSDLKAIRTTARRDGDE-WVIDGSKTFITNGILADLVIVACKTDPEAGHKGISL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R  +K+G ++  T EL F         L+G+       +        
Sbjct: 185 IVVERGAEGFERGRKLDKVGMKAQDTAELFFHEVRVPAENLIGEEGRGFYHMMGNLPTER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ S++    +   A+ YA+ R   G  + +    + A+ADI   + AA        
Sbjct: 245 LAIAVSSLAAAERAYVLALDYAKTRTAFGQPIGEFQANRFALADIRAKLNAARVYVDGCI 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +  + +  ++EAA A       KYW  +    VI   M+  GG GY+ E  IAR +R+S
Sbjct: 305 MALFQGELTADEAAAA-------KYWTSETGWEVIDRCMQLFGGYGYVNEYEIARIWRDS 357

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               +  G+   M+  +   L
Sbjct: 358 RVQRVFGGTSEIMLEIIGRSL 378


>gi|169828469|ref|YP_001698627.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168992957|gb|ACA40497.1| Acyl-CoA dehydrogenase family member 9 [Lysinibacillus sphaericus
           C3-41]
          Length = 552

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 143/369 (38%), Gaps = 31/369 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L +++   GL       ++  +   K+   + A ++         + +   V +   +
Sbjct: 51  RQLFQKAGDLGLLAIEIPEAYGGLELNKKISGLVAEKMGFGGSFSVSYNIHAGVGTLPYI 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + PK+ S E+                  LTE   G+D     +  +   
Sbjct: 111 -YFGNEEQKLKYLPKLASGEW-------------IGAYALTESEAGSDALRPKTNARLTE 156

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG         +W  ++ ++D F++ AQ         +  L+ + S  G+   + + K+G
Sbjct: 157 DGKAWLVNGEKQWITNAQLADVFVVFAQTN-----RGMTALIVERSIKGVSVGQEEEKMG 211

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +    +   L  V  G +  M I  +  L  A  ++   + +   A++
Sbjct: 212 IKGSSTATLILEDVIVPINCVLGEVGKGHIVAMNILNMARLKLAFSNIGTAKQAFQIAVN 271

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-- 395
           Y + R      ++D  +++  +AD+A+ I  A + ++R A   DEA + +      +   
Sbjct: 272 YGKGRKQFERPIVDFTLIQEKLADMAVLIYGAESGAYRTAGKVDEAIASASNETIVQKIS 331

Query: 396 ----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K  C +    +  EA++  GG GY+++  + R YR++  N I  G+     
Sbjct: 332 EFALECALHKVHCSEALGRIADEAVQIHGGYGYMQDYEVERLYRDARINRIFEGTNEINR 391

Query: 452 LDVLNLLEK 460
           L +  +L K
Sbjct: 392 LTMAKMLWK 400


>gi|119382954|ref|YP_914010.1| butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
 gi|119372721|gb|ABL68314.1| Butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 386

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 132/367 (35%), Gaps = 28/367 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL-MSPSVTSASMVA 163
            L++     GL           +    A +++AA +   A      L  + +   +  + 
Sbjct: 39  ELVQEIREMGLFGMSIPEEHGGIGLTMAEEVQAALVLGQASPVFRSLVGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  TP     + P++ S E                   LTE   G+D  ++    +   D
Sbjct: 99  IDGTPEQKAHYLPQLASGEM-------------IASFALTEPDAGSDAGSLRCSARLDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  F + A+ +        V   L +    GL       K+G +
Sbjct: 146 HYVLNGTKRFITNAPHAGLFTVFARTDPDSKSAAGVTAFLVEAGTPGLHLGPRDRKMGQK 205

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
            + T ++   +        + G   +  G    MK+L    L  + + V      + +++
Sbjct: 206 GSHTCDVILEDCRVPASAIIGGPDRLGQGFKTAMKVLDRGRLHISAVCVGAAERLIRDSL 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  + ++ +++  +AD   +  AA  +    A   D   S S EAA     
Sbjct: 266 AYAMERRQFGEPIAEKQLVQAMLADSRAEAYAARCMIEETARRKDAGLSVSTEAA----- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  +M   V   A++  GG+GY+ E ++ R YR+     I  G+     L +  
Sbjct: 321 --CCKMYASEMVGRVADRAVQIHGGAGYMAEYAVERFYRDVRLFRIYEGTTQIQQLVIAR 378

Query: 457 LLEKGTN 463
            + +  +
Sbjct: 379 NMIREAS 385


>gi|255010864|ref|ZP_05282990.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
 gi|313148666|ref|ZP_07810859.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
 gi|313137433|gb|EFR54793.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12]
          Length = 567

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 98/508 (19%), Positives = 185/508 (36%), Gaps = 60/508 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE          A   ++  P            ++V +       L      GL  
Sbjct: 55  LEIVGEICG-DIIAPNAEGVDHEGPVCAD--------NRVTYASGTAQNLDACRKAGLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R F  +       I AA +   +     +L       A  +         + +  +
Sbjct: 106 MAMPRRFGGLNFPITPYIMAADIVSRSDAGFENLW-GLQDCAETIYEFANEEQKQRYITR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           +   E               + + LTE   G+D+ ++  +      D  + L+G K F++
Sbjct: 165 VCQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +D  ++LA+ E G      +   + D    G+  +R++NK+G + + T EL + N  
Sbjct: 211 NGDADIHLVLARSEEGTHDGRGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L  A  SV   + +  EA+ YA+ R   G  +I+ P 
Sbjct: 271 AELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE-------AAYARIMA 397
           +   ++ +   + A+ +L +  A   D          E K   EE       A  A    
Sbjct: 331 VAEILSLMKAKLDASRSLLYETARFVDIYKALDDIAKERKLTPEERAEQKTFAKLADAFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSG++++ +  R YR+S   SI  G+    V+  +  
Sbjct: 391 PLGKGMGSEFANQNAYDCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRY 450

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILR----------DSISLCKEDKGL---ARFL 504
           +  G  L  ++       +    + +   L+            I+  K+ + L   AR L
Sbjct: 451 VTTGAYL-ARIQEYENMPVAPELEGLQNRLKSMASKYAACVTQITEAKDQELLDFCARRL 509

Query: 505 TEKIALASSAAALYRAGMNDIADVFLEN 532
            E  A       + +      +D+F E+
Sbjct: 510 VEMAAHIIMGHLMVQDASK--SDLFSES 535


>gi|326577417|gb|EGE27301.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis O35E]
          Length = 509

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 85/485 (17%), Positives = 180/485 (37%), Gaps = 58/485 (11%)

Query: 70  AQELARMANYNTPQL-HAYGPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRSFEP 126
            +  A  A      L       G +++  V   P  +  +  +    G      +  F  
Sbjct: 42  LEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEVYAQYCELGFPAINAEPEFGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYD 184
           +    +  + +A   +M        M P ++  ++  +    T      +  K+ +  + 
Sbjct: 102 LGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGTEVQKATYLEKMNTGAWS 159

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE   G+D+  I ++     DG Y ++G K F+S+   D   
Sbjct: 160 GT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTE 206

Query: 242 --AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               I+LA++         +  F+VP+ + +     G  N +    +++K+G +++AT  
Sbjct: 207 NIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCV 266

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---- 344
           + F +  G+L+G  N     +     +  L +AI  ++   ++   ++ YA+ R      
Sbjct: 267 MNFDHAKGYLIGPKNRGLNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRAL 326

Query: 345 --------SGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRSE---EA 390
                   S   +I  P ++  +           AL + L   A++  + +S SE     
Sbjct: 327 SGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGESPSEVKFAD 386

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PITK +  +         ++  GG GYI E  + ++ R++  + +  G+    
Sbjct: 387 EMLSLLTPITKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQ 446

Query: 451 VLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            LD+L     G    +       + +    +       +   +S   +     R LT +I
Sbjct: 447 ALDLLGRKVLGSQGRMLANFTKIIHKFCQENADN--DEVGQMVSTLAKLNQQWRDLTSRI 504

Query: 509 ALASS 513
           A+ S+
Sbjct: 505 AMQST 509


>gi|302664232|ref|XP_003023750.1| hypothetical protein TRV_02137 [Trichophyton verrucosum HKI 0517]
 gi|291187760|gb|EFE43132.1| hypothetical protein TRV_02137 [Trichophyton verrucosum HKI 0517]
          Length = 427

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 135/401 (33%), Gaps = 51/401 (12%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP     D+ E      A++ +    GL        +          I         
Sbjct: 49  EEIGPKVRDMDEAETMD--PAVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARV 106

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 ++    T  +   L   +  + K W P++               T       L+
Sbjct: 107 DPSVSVMVDVHNTLVNTAVLKYGSAAIKKRWLPRL--------------ATDTVGSFCLS 152

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  A+ ++ +K S G        W  +S  +  FI+ A ++   G   +   + 
Sbjct: 153 EPVSGSDAFALQTKAEKTSSGYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFVV 212

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI 322
           +    G    + + K+G R+++T  L F +         N+     +  K  I  L+   
Sbjct: 213 EKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGEEGQGYKYAISLLNEGR 269

Query: 323 MSVSGMRVSLAEAIHYAR-----------------------RRHVSGGILIDQPVMKRAI 359
           + ++     LA                               R   G ++     M+  +
Sbjct: 270 IGIAAQMTGLALGAWENAAGYFFSPELTTFSTNCDNSYIWNDRKQFGQLIGTFQGMQHQV 329

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A    +IAAA AL F  A   +  +   ++AA A       K +  ++A  V   A+E +
Sbjct: 330 AQSYTEIAAARALVFNAARKKEAGQDFVQDAAMA-------KLYASQVAGRVSGLAVEWM 382

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG G++ E    + +R+S   +I  G+ N  +  +   L+K
Sbjct: 383 GGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 423


>gi|149913216|ref|ZP_01901750.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
 gi|149813622|gb|EDM73448.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b]
          Length = 576

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 88/471 (18%), Positives = 174/471 (36%), Gaps = 52/471 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + +  E   + + VLS     L R  + +  +L      G     +   P +    +   
Sbjct: 38  AAILTEAGRMSQEVLSP----LNRSGDQHPARLE----NGV----LRTSPGFDQGYKAIA 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G            +    A       +   A L    +   +      +    +  + 
Sbjct: 86  DGGWVSISAHPDHGGMGLPMALATAVNEMMSSACLALQIIPLMTQGQIDALEHHASDALK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E++ T             + LTE + G+D+ A+T++ +   DG Y ++G 
Sbjct: 146 RTYLPKLVSGEWNGT-------------MNLTEPQAGSDVGALTTRAEPRGDGTYAITGQ 192

Query: 232 KWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRL 275
           K ++S   +D       ++LA++         +  FLVP+ L D     G  N L    +
Sbjct: 193 KIYISWGDNDFTDNVVHLVLARLPDGPPGTKGISLFLVPKFLPDEHGKPGRANDLKVVGV 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   + T  +++    G+L+G  +     +  M     L      +     +L  A
Sbjct: 253 EHKMGLHGSPTCTMQYDGATGWLVGREHDGMRAMFTMMNNARLGVGGQGIGVAEAALQHA 312

Query: 336 IHYARRRHVSGGI-------LIDQPVMKRAIADIALDI--AAATALSFRLANSFDEAKSR 386
           + YA  R             ++D   ++R +  +  DI  A A AL+  +A   + A   
Sbjct: 313 LAYATDRKQGRTPVEGGTGAIVDHADVRRMLTTMKADIFAARAIALACAVAIDMETATGA 372

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + +A A  + PI K +       V    ++  GG G++EE   A++ R+    +I  G+
Sbjct: 373 PDWSARAAFLTPIAKAFGTDTGIEVANLGVQVHGGMGFVEETGAAQYLRDVRVTAIYEGT 432

Query: 447 GNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
                +D+    L  G      L   +E     + +  +  L + +    E
Sbjct: 433 NGIQAMDLAARKLMDGGEAAHALIDEIEAQ-AEAARATLPDLAEPLWQASE 482


>gi|148559146|ref|YP_001258066.1| isovaleryl-CoA dehydrogenase [Brucella ovis ATCC 25840]
 gi|148370403|gb|ABQ60382.1| isovaleryl-CoA dehydrogenase [Brucella ovis ATCC 25840]
          Length = 382

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 288 MYVTFNASRAYVYAVAAACDRDETTRKDAAG-------CILYSAENATQMALQAIQSLGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 341 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 382


>gi|94494915|ref|ZP_01301496.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425181|gb|EAT10201.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 385

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 139/374 (37%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   R D  ++ P    L       GLH    +  +  +      H I    +   +   
Sbjct: 30  PLAARIDADDWFPR-DELWAAMGALGLHGITVEEEWGGLGLGYLEHVIACEEVSRASASI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + PK+ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIRRWGNEDQKARYLPKLISGEH-------------VGSLAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++   G        W  ++P +D  ++ A+     G   +   L +   
Sbjct: 136 GSDVVSMKLKARETDKGYVLDGTKYWITNAPYADTLVVYAKT--GEGSRGITAFLIEKGM 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F         ++G LN   G +           A + 
Sbjct: 194 AGFSIGQKIDKVGMRGSPTAELVFDGCEVPRENVMGPLNGGVGVLMSGLDYERAVLAGIQ 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L   I Y R R   G  +    +M+  +AD+ + + +A A  + +A S D  K
Sbjct: 254 LGIMQACLDTVIPYVRERKQFGQPIGSFQLMQAKVADMYVALNSARAYVYAVARSCDAGK 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   +AA A ++A        + A  V  EA++ +GG+GY  +  + R+ R++    I  
Sbjct: 314 TTRFDAAGAILLA-------SENAVRVALEAVQALGGAGYTRDWPVERYMRDAKLLDIGA 366

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 367 GTNEVRRMLIGREL 380


>gi|325523272|gb|EGD01632.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 596

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 100/517 (19%), Positives = 193/517 (37%), Gaps = 63/517 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G        +E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDAVAQLPGFEDAGYDTAQAVLEESAKFCGE---VLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFREAFRQFVEGGWQGLQHPTDYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYRKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  +   L + +   + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVANALIAEIGDTVA 474

Query: 478 SSGKKVITILRDSISLCKE-DKGLARFLTEKIALASS 513
           +  K          +  ++  + L+  +   +A A  
Sbjct: 475 ALAKVDGAAAAAMKARLEQGAQALSSVVAYVVANAKQ 511


>gi|183222449|ref|YP_001840445.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912487|ref|YP_001964042.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777163|gb|ABZ95464.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780871|gb|ABZ99169.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 570

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/423 (19%), Positives = 169/423 (39%), Gaps = 39/423 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V        +++     GL  + + R +  +      K   A + +     +  +   S
Sbjct: 95  EVIHPKEMVDVIQMYYDAGLGPAAFKRKYGGLGVPSIIKAMIAEI-MYRSDSSITIAVGS 153

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           +  A+++ +  +  +  +W PK+ S  Y              + +GL+E   G+D+  IT
Sbjct: 154 MGLAAILEVCASEEMKNEWIPKLISGNY-------------TVTMGLSEPDFGSDLPNIT 200

Query: 216 SQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNG 269
           ++  K  +  + L+G K F +     +  S   + LA+      G   +   + +     
Sbjct: 201 TKAFKNGEEWF-LNGTKRFQTVACGVNGGSGITLTLARTGTQESGARGLSFFIVE--NKD 257

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGM 328
              Q ++ K+G +++AT E  F N+ G L+G         V  M     L  +      +
Sbjct: 258 YVVQGIEKKLGIKASATCETVFENSKGHLVGKEGFGLVKYVMGMLNGARLSVSSQGTGIV 317

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------E 382
             +  E+  YA  R   G  + + P ++R +  +  ++A    L    A S D      +
Sbjct: 318 TAAFEESYKYANERIQFGKPIYEIPAVRRMLDRMERELAGMRCLMVEAAYSVDKYYWYED 377

Query: 383 AKSRSEEA--------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +  S E           A  + PI+KY+  +M   ++ + ++ +GG+GY E+  ++R Y
Sbjct: 378 GREVSTEELKSAKFWEKVANTLTPISKYYNSEMCNDLVYDGLQVLGGAGYTEDYDLSRLY 437

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISL 493
           R++   +I  G+    V   +  +  G +      + L+   LGS G K +  +R+    
Sbjct: 438 RDARITNIYDGTTQIQVNAAIGGITSGMSGTGTFRAYLDHLSLGSDGNKRLKEIREVFES 497

Query: 494 CKE 496
             E
Sbjct: 498 IVE 500


>gi|119899371|ref|YP_934584.1| acyl-coa dehydrogenase [Azoarcus sp. BH72]
 gi|119671784|emb|CAL95698.1| probable acyl-coa dehydrogenase [Azoarcus sp. BH72]
          Length = 390

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 132/377 (35%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA   L ++    GLH    +  +        AH I    +   +   
Sbjct: 31  PRAAAIDQNNEFPA--DLWKKLGDLGLHGMTVEEEYGGSAMGYLAHIIALEEVSRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIRRNGNAAQKQKYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  +   +D  ++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADKKGDRYVLNGSKMWITNGGDADTLVVYAKTDINAGPKGMTAFIIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS-- 324
            G  +    +K+G R + T  L F +       + NV  G     ++L+  LD       
Sbjct: 196 KGFSHGTHLDKLGMRGSNTFPLFFDDVEVP---EENVLGGVGNGARVLMSGLDYERAVLC 252

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M   +   + Y   R   G  + +  +M+  +AD+     A  A  + +  + D
Sbjct: 253 GGPLGIMAACMDVVVPYLHERKQFGQSIGEFQLMQGKLADMYSTWMATRAYVYAVGQACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R++ A   R  A     +  + A  +  EA++ +GG GY  E S  R +R++    
Sbjct: 313 ----RTDHARTLRKDAAGAILYSAEKATWMAGEAIQTLGGVGYTNEYSTGRLWRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|89902601|ref|YP_525072.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347338|gb|ABD71541.1| isovaleryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
          Length = 392

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 145/405 (35%), Gaps = 32/405 (7%)

Query: 60  LLGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            LGE V  L  T  E A+             P     DK +  P    L R+    GL  
Sbjct: 9   QLGEDVDALRDTVYEFAQ---------REIAPRAAAIDKNDQFPM--DLWRKMGDLGLLG 57

Query: 118 SIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                 +    +   AH +    +   +   A    + S    + +    +    + + P
Sbjct: 58  ITVGEEYGGANMGYLAHMVAMEEISRASASVALSYGAHSNLCVNQIKRNGSLEQRQKYLP 117

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+                L ++E   G+D+  +T + +             W  +
Sbjct: 118 KLISGEH-------------VGALAMSESGAGSDVLGMTLKAEDKGGFYLLNGSKMWITN 164

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            P +D  ++ A+ +  +G   V   L +    G    +  +K+G R + T EL F+N   
Sbjct: 165 GPDADTLVVYAKSDPELGARGVSAFLIEKGMPGFSVAQKLDKLGMRGSHTGELVFNNVEV 224

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L       + +   +  + A+++   +  M+  +   + Y   R   G  + +  
Sbjct: 225 PAQNILGGLNNGAKVLMSGLDYERAVLTGGPLGIMQAVMDNVMPYIHDRKQFGQSIGEFQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD+   + A  A ++ +A + D     +E     R        W  + A  +  
Sbjct: 285 LIQGKVADLYTVLQAGRAFAYTVAKNLD--LLGAEHVRQVRKDCASVILWTAEKATWMAG 342

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E ++  GG+GYI E  + R +R++    I  G+     + +   L
Sbjct: 343 EGVQIFGGNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 387


>gi|52549991|gb|AAU83840.1| acyl-CoA dehydrogenase short-chain specific [uncultured archaeon
           GZfos34G5]
          Length = 382

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 135/371 (36%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P    L++R     L+   + R +       A  +        A    
Sbjct: 30  PRAAEIDKKGTFP--RDLVKRMAELKLYGIPFPREYGGASATMASYVAVVEELSRASASI 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L S  + +   +    T    + +               P+ + +      LTE   G
Sbjct: 88  GFLSSAGLITIFPIYYAGTEEQKQKYL-------------RPLCEGTKLGAFALTEPSAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ +      D         +  ++ ++D +I+ A  +       +   + +    
Sbjct: 135 SDPTAMDTNAVHEGDEYLLNGRKAYITNTSVADIYIVFAYTDKGKKRAGMSAFIVEKGTK 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAI--MSV 325
           G  +  + + +G RS     L+F++        L     G    M  L     A+  + V
Sbjct: 195 GFSFAGINDMLGMRSCIVGGLKFNDCRVPEENLLGREGDGFKIAMGTLDRDRIAMSSVGV 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  +  YA+ R  S   + +   ++  +AD+A+++ AA  L+++ A+  D+ + 
Sbjct: 255 GITQACLDISKEYAKERRQSSQPIANFQAVQFMLADMAVEVEAARLLTYKAAHLADKGEK 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++        A I K +  ++A      A++  GG G  +E    R+YR++   SI +G
Sbjct: 315 ITK-------YASIAKLYASEVAQRAATNAVQIHGGYGCTKECPAERYYRDAKILSIAVG 367

Query: 446 SGNAMVLDVLN 456
           +     L +  
Sbjct: 368 TSEIQRLVIAR 378


>gi|194363998|ref|YP_002026608.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346802|gb|ACF49925.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 388

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 84/394 (21%), Positives = 139/394 (35%), Gaps = 26/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             AQ+  R A  +  Q     P   RWD     P     + ++   G      D      
Sbjct: 10  EEAQQAYREAARDFAQAE-LAPHAARWDAEGIFP--REAIAKAGELGFCGLYMDPEVGGS 66

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                    +S    ++ MV+    P +   W   + S       
Sbjct: 67  GLSRLDAAVVIEELANVDPSTAAYISIHNMASWMVSKWGQPALRDAWGTDLSSG------ 120

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                  S      LTE   G+D A++ +   +  D  Y L+G K F+S   +   +++ 
Sbjct: 121 -------SKLASYCLTEPGAGSDAASLKTTAVRDGD-FYVLNGSKAFISGAGATELLVVM 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G  G   V  +       G+ + R + K+G  S  T  + F N    +   L     
Sbjct: 173 ARTGGAGAGGVSAIAVPADLPGISFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGG 232

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  S+   + +L  A  Y   R   G  L +   ++  +AD+A+
Sbjct: 233 GFKLAMKGLDGGRINIAACSLGAAQGALDAARRYMGERRQFGKTLSEFQALQFKLADMAI 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D        A+ A +   + K +       +  EA++  GG GY
Sbjct: 293 ELVAARQMVHTAARKLDAG------ASDANVWCAMAKRFATDAGFNICNEALQIHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  I R  R+S  + IL G+   M + V   L
Sbjct: 347 IREYPIERLLRDSRVHQILEGTNEIMRVIVARHL 380


>gi|262371049|ref|ZP_06064371.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262313935|gb|EEY94980.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 600

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/489 (16%), Positives = 165/489 (33%), Gaps = 63/489 (12%)

Query: 59  ELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERW-DKVEFHP-AWHALLRRSIHDGL 115
           E +   ++    +  A    N  +P   +    G  W D V   P  +    ++ I  G 
Sbjct: 33  ETVSRELVDQYLEAAADFCENELSPINQSGDREGCTWNDGVVTTPTGFKEAYQKYIELGF 92

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +  +       +     + +   A    G     S  +   +    +      + 
Sbjct: 93  PSLSAEEQYGGQALPVSLGNVISEMVGTANWAWGMYPGLSHGAVRTLEHHGSAEQKDAYL 152

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + S  +  T             + LTE   G+D+  I ++ +  +DG Y ++G K F+
Sbjct: 153 PNLVSGVWTGT-------------MCLTESHAGSDLGIIRTKAEPQADGSYAITGEKIFI 199

Query: 236 SSPMSD-----AFIMLAQVEGRV-GCFLVPRLLED----------GSPNGLCYQRLKNKI 279
           S+   D       I+LA++ G   G   +   +            G  N +    +++K+
Sbjct: 200 SAGEHDMAENIVHIVLARLPGAPTGTKGISLFIVPKFNLNADGTVGERNAVRCGSIEHKM 259

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   N+T  + F N  GFL+G  N     +        + +A+  ++    +   A+ YA
Sbjct: 260 GIHGNSTCVINFDNAKGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGAFQGALTYA 319

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           + R                  +I  P ++  +           AL + L+   D  +  +
Sbjct: 320 KDRLAMRSLTGPKAPEKEADPIIVHPAVRNMLLTQKAFAEGGRALVYLLSLHADVVEQGA 379

Query: 388 EEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            E           ++ PI K +  +         ++  GG G+I E  + +  R++    
Sbjct: 380 TEEERKSSDNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIAC 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD+L     GT              G+  K    I+   +   K++  + 
Sbjct: 440 LYEGTTEIQALDLLGRKVLGTQ-------------GAMLKDFTKIIHKFVEANKDNAAMK 486

Query: 502 RFLTEKIAL 510
            F+    AL
Sbjct: 487 EFVEPLAAL 495


>gi|159900084|ref|YP_001546331.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893123|gb|ABX06203.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 382

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    PA  +  ++    GL    +                A           
Sbjct: 26  PKAKDVDEKAQIPA--STWQKMADMGLMGLPFAEELGGAGADAISAALAVEEIARCCGST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  V   S  +A+    +  + +               P  +       GLTE   
Sbjct: 84  ALSYAAHVGLGSAPIAMFGNDQQKEQFL-------------RPAAEGRYLGAFGLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  +  +   +  +         W  ++  +   I  A      G   +  ++     
Sbjct: 131 GSDAGSTRTTAVRDGNEWVINGAKMWITNAAEAGHLIATAITNKDRGKRGISAIIIPKGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVS 326
            G+ +   ++K+G R + T  + F N    L   L     G V+ +K+   LD   +S+ 
Sbjct: 191 PGVHFGSPEHKMGLRGSNTHAITFDNVRVPLENLLGAEGDGFVQFLKV---LDGGRISIG 247

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + L       A+ YAR R   G  +     +   +AD+  ++ AA  L  R A   +
Sbjct: 248 AMAIGLGVAAMEAAVSYARERQAFGHAIGSYQSISNMLADMDTELEAARLLILRAAWLKE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  + EAA A++ A       C+ A       ++  GG GY  E  + R+YR++   +
Sbjct: 308 NGKPFTREAAIAKLYASEASERACRNA-------VQIFGGYGYSSEYPVERYYRDTRLLT 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   + + +   L
Sbjct: 361 IGEGTSEILRMVISRGL 377


>gi|326317408|ref|YP_004235080.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374244|gb|ADX46513.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 388

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 72/406 (17%), Positives = 137/406 (33%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +  A  A      +L  +     +WD     P     + ++   G       
Sbjct: 2   DFELTEEQRAFADTAREFARAELAPH---AAQWDAEGIFP--REAIAKAGALGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +   +   +                    ++    +  M+    T  V   W P + S 
Sbjct: 57  ENAGGLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRDHWGPLLTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D A++ ++ ++  D         +   +  +D
Sbjct: 117 E-------------KLASYCLTEPGAGSDAASLKTRAERSGDAYVINGSKAFISGAGSTD 163

Query: 242 AFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+      G   +          G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVLMARTGAPDSGAGGISAFAVPADAAGIHYGKKEEKMGWNSQPTRTISFDNVHVPANH 223

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L  A  Y + R   G  +     ++ 
Sbjct: 224 LLGAEGEGFKIAMKGLDGGRINIATCSVGAAQGALNAAQQYMQDRRQFGKAIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V+ EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFDVVNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 338 LHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIARRMLDGDA 383


>gi|288554041|ref|YP_003425976.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545201|gb|ADC49084.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 594

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 86/456 (18%), Positives = 161/456 (35%), Gaps = 60/456 (13%)

Query: 95  DKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +K+E H   H   LL+++   GL  +     +  +   +      +  ++          
Sbjct: 54  EKIENHEFEHTVRLLKQAGEIGLLGADVPEEYGGLGLDKISSSLISEKFVRGGAFGLSHG 113

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     +  +           + P + S E                   LTE   G+D  
Sbjct: 114 AHVGIGSLPIVFFGNHEQKSKYLPGLASGE-------------TIAAYALTEPSSGSDAL 160

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +       G  Y L+G K W  +S  +D F++ A+++G          + +    G+
Sbjct: 161 GAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFVVYAKIDGEQ----FTAFIVEKDYEGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
                + K+G + ++T  L   +        L  +  G V    IL        +  V  
Sbjct: 217 STGPEEKKMGIKGSSTRTLILEDALVPKENILGEIGKGHVIAFNILNVGRYKLGVGCVGS 276

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE----- 382
            + +L  A  YA  R      +    +++  +A++A    AA +  +R    F+E     
Sbjct: 277 SKRALELAAKYANERKQFKTPIGKFSLIQEKLANMATATYAAESSIYRTGGLFEERLGGL 336

Query: 383 -------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   ++ +   A   I   + K    +    V  EA++  GG G++ E  + R YR
Sbjct: 337 SDEEQKDGRAVANAIAEYAIECSLNKVSGSETLDYVADEAVQIHGGYGFMAEYEVERIYR 396

Query: 436 ESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           +S  N I  G+     L V            L LL+K T L E+L   + Q++G S  + 
Sbjct: 397 DSRINRIFEGTNEINRLLVPGTIMRKAMKGELPLLQKATALQEELMMMMPQEIGDSPLEQ 456

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
              L           G+A+ +   + +A + A  Y+
Sbjct: 457 EKYLL----------GMAKKI--FLMVAGTGAQKYQ 480


>gi|324997655|ref|ZP_08118767.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 383

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 135/363 (37%), Gaps = 29/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L   +  +G        S+              A   + +   A  L         + 
Sbjct: 40  RELFTTAGANGFLGIDVPESYGGGGVPDFRFNAVIAEELMRSGAAASGLGLTLHNDIVLP 99

Query: 163 ALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            L+   T    + W P +                ++ +G+ +TE   G+D+A++++   +
Sbjct: 100 YLLAYCTEEQKQRWLPGVVDG-------------TLILGIAMTEPGIGSDLASMSTTAVR 146

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y ++G K F+++ ++   +++A + +       +  L+ +    G    R  +K+
Sbjct: 147 EGD-QYVVNGSKTFITNGINADLMVVAVKTDPSQKHKGMSLLVLERGMEGFERGRNLDKL 205

Query: 280 GNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G  +  T EL F++        L  D       +        L  A+  V+  R +L + 
Sbjct: 206 GQHAQDTAELSFTDVRVPVENLLGPDEGQGFTQLVTNLPQERLSIAVAGVAAARTALTQT 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  +      K  +A++  +I  A         + +  +  + +A+ A  
Sbjct: 266 LEYVKERKAFGSPIGSFQNSKFVLAELDTEIDIAEHYVDDCVRALNAGELTAVDASKA-- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KYWC ++   V+ + ++  GG GY+ E  I++ Y ++    I  G+   M   + 
Sbjct: 324 -----KYWCTELQGRVVDKCLQLHGGYGYMSEYPISKAYADARITRIYGGTTEIMKEVIG 378

Query: 456 NLL 458
             L
Sbjct: 379 RGL 381


>gi|47227740|emb|CAG08903.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 426

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 133/382 (34%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +              +  
Sbjct: 65  PRMAEWDQKEVFPV--ETMRKAAQLGFGGIYVQPDVGGSGLSRLDTSVIFEALSTGCVST 122

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+      +  + + P + S E                   LTE   G
Sbjct: 123 TAYISIHNMCAWMIDTFGNAKQRERFCPDLCSME-------------KFASYCLTEPGSG 169

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  Q   D  Y L+G K F+S    +D ++++ +  G  G   +  ++ +   
Sbjct: 170 SDAASLLTSAQLKGDH-YILNGSKAFISGGGDTDVYVVMVRT-GGKGPKGISCMVVEKGT 227

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   LG+                ++ A  S
Sbjct: 228 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVSHRLGEEGQGFSIAMKGLNGGRINIASCS 287

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      +  A  +   R   G  L +   ++  +A++A  + A+  L    A +  E +
Sbjct: 288 LGAAHACVQLAKEHLLVRKQFGETLSNNQFLQFKLAEMATKLVASRLLVREAAKALQEER 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAV--------IAEAMECIGGSGYIEERSIARHYRE 436
                   A  +  + K +       V          +A++  GG GY+++ ++ +  R+
Sbjct: 348 PD------AVSLCSMAKLFATDECFNVSPPLWPKICNQALQMHGGYGYLKDYAVQQFVRD 401

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
              + IL G+   M + +   L
Sbjct: 402 IRVHQILEGTNEVMRMIISRNL 423


>gi|218291116|ref|ZP_03495131.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238927|gb|EED06135.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 397

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 130/371 (35%), Gaps = 36/371 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +       +LRR    GL        +        +   A     + + + 
Sbjct: 26  PYIREWDEKQHFE--PRVLRRLAELGLMGVCIPEKYGGAGMD--YNTLAIVCEELERGDI 81

Query: 149 GHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  +       GLTE 
Sbjct: 82  AFRTAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQARGEKIGAFGLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+AA+ +   +  D         W   + ++D F++ A  +       +   + + 
Sbjct: 129 NAGSDVAAMRTTAVRDGDSYILNGSKIWISLADVADHFLVFAYTDRSKKHHGITAFIVER 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G   + +K K+G R+  T EL F +    +    N      E  KI +  LD+   +
Sbjct: 189 GWEGFSTRSIKGKLGIRAGNTGELFFDHVRVPV---ENRLGEEGEGFKIAMSALDNGRFT 245

Query: 325 V-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V       +   L  ++ Y   R   G  +    ++++ IA +A ++  +  L +R    
Sbjct: 246 VAAGACGCIAACLEASVKYCHERETFGQPIGKHQLVQQMIAKMAANLDISRLLVYRAGWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++    + E + A+ +A       C  A    ++A++  G  GY  E  + R+ R + A
Sbjct: 306 KNQGLPNTRETSLAKWVA-------CDAAWEAASDAVQIHGAYGYSNEYPVERYLRNAKA 358

Query: 440 NSILLGSGNAM 450
             I  G+    
Sbjct: 359 PVIYEGTREIH 369


>gi|28900980|ref|NP_800635.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366191|ref|ZP_05778651.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
 gi|260879833|ref|ZP_05892188.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|260894507|ref|ZP_05903003.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|260903044|ref|ZP_05911439.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|28809426|dbj|BAC62468.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086497|gb|EFO36192.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308092082|gb|EFO41777.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034]
 gi|308108347|gb|EFO45887.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037]
 gi|308114756|gb|EFO52296.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030]
          Length = 389

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 138/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F        AH I    +   +   
Sbjct: 33  PLAQSIDQSNDFP--NHLWSKLGEMGLLGVTTSEEFGGAGMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGTQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG+ N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGEENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYTQMNAAKAYVYAVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDSAGA-------ILYSAELATKMALDAIQLLGGNGYINEFDTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|239940162|ref|ZP_04692099.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986650|ref|ZP_04707314.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443592|ref|ZP_06582982.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346539|gb|EFE73443.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 383

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 113/303 (37%), Gaps = 23/303 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   +    + W P++ S E                  GLTE   G+D   + ++ 
Sbjct: 95  AKTIASWGSEEQKRQWLPRLTSGE-------------AIGCFGLTEPGTGSDAGNLVTRA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +            +  +   +D  ++ A+     G   V   L      GL  + +  K
Sbjct: 142 VRDGGDYVVNGTKMFITNGTWADVVLLFARTNDSPGHRGVSAFLVPTDTPGLTRRTVHGK 201

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R  AT EL   +       LLG                 +  A   V   + +   A
Sbjct: 202 LGLRGQATAELVLQDVRIPASCLLGPEGKGFPLAMSALAKGRMSVAAGCVGIAQAAQDAA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  +    +++  ++DIA+D+ AA  L++R+A+  D  +  +  A+ A  
Sbjct: 262 VRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLIDRGQDFATAASKA-- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A      A++  GG GYI+E  + +  R++   ++  G+     L + 
Sbjct: 320 -----KLYASEAAVRCANNALQVFGGYGYIDEYPVGKLLRDARVMTLYEGTSQIQKLIIG 374

Query: 456 NLL 458
             L
Sbjct: 375 RAL 377


>gi|312602732|ref|YP_004022577.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312170046|emb|CBW77058.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 421

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 131/374 (35%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+ +  P    L ++    G+        +  V +   AH +    +       
Sbjct: 60  PRAADVDRTDQFPV--DLWKKFGDLGVLGMTVSAEYGGVNMGYLAHMVAMEEISRACASI 117

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S E+                L ++E   
Sbjct: 118 GLSYGAHSNLCVNQIHRNGNEAQKRKYLPKLVSGEH-------------VGALAMSEPNA 164

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P  D  ++  + +   G   +   + +   
Sbjct: 165 GSDVVSMRLRADKKRDRYVLNGTKTWITNGPDCDTLVVYGKTDLEAGARGMTAFIVEKGT 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++   
Sbjct: 225 KGFSVAQKLDKLGMRGSHTGELVFEDVEVPHENVLGQVGGGVKVLMSGLDYERAVLAGGP 284

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              MR  L   + Y   R      + +  +++  +AD+   + A  A  + + +  D  K
Sbjct: 285 TGIMRACLDAVVPYIHDRKQFSQSIGEFQLIQGKVADMYTTLQACRAYLYAMGSQLD--K 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             SE     R        +  + A  +  EA++ +GG+GY+    + R +R++    I  
Sbjct: 343 LGSEHVRQMRKDCAGVILYTAEKATWMAGEAIQILGGNGYLNAFPVGRLWRDAKLYEIGA 402

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 403 GTSEIRRILIGREL 416


>gi|224368114|ref|YP_002602277.1| Acd3 [Desulfobacterium autotrophicum HRM2]
 gi|223690830|gb|ACN14113.1| Acd3 [Desulfobacterium autotrophicum HRM2]
          Length = 382

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 130/362 (35%), Gaps = 29/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L ++    GL       ++E       ++ I    +  +   +A  + + +      + 
Sbjct: 40  ELTQKMGEIGLFGMFVSEAYEGQGMDYLSYIIAVEEVARIDGSQAATIAAGNSLGIGPLY 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P             P+ +     G GLTE   G+D     +   +  D
Sbjct: 100 YFGTEEQKQRYLP-------------PLCRGEKVWGFGLTEPTAGSDAGGSRTTAVQDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFI---MLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+++   D  +   + A+      G       + +    G     +  K+
Sbjct: 147 D-WVINGSKIFITNAACDMTLGVTVQAKTGIRDNGKPEYTCFIVEADTPGFKAVPMHKKM 205

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
             R++ T EL F +        L     G  + +K L    L    M + G + +   A+
Sbjct: 206 MWRASNTAELYFDDVRVPKENILGKRGDGFHQMLKTLDGGRLSIGAMGLGGAQGAYDLAL 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R      +     +   +AD A++I  A  L ++      E +    EAA A   
Sbjct: 266 AYAKERQQFNQPISKFQAIAFKLADCAMEIECARNLMYKACWLRSENRPFEREAAMA--- 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +C ++   V   A++  GG G ++E ++ R YR+     I  G+     L +  
Sbjct: 323 ----KLYCSELMGRVANHAVQIHGGYGLMKEYNVERFYRDQKLLDIGEGTSEVQRLVISR 378

Query: 457 LL 458
            +
Sbjct: 379 YI 380


>gi|221134834|ref|ZP_03561137.1| Acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999]
          Length = 598

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 153/437 (35%), Gaps = 50/437 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+ A      ++A     G  WD   V     +     + +  G      
Sbjct: 36  DLVDAIYEEAAKFAENVLAPINAVGDTEGCHWDDGVVTTPSGFKEAYAQYVEGGWPSMAH 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +       +     A  +  A          S      +    T +  + +   + +
Sbjct: 96  PEQYGGQALPYSLASAMAEWFSGANHSWAMYPGLSQGCIDTLKAHGTEQQKEMFLHHLVA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   G+D+  +  + +   DG Y +SG K F+S+   
Sbjct: 156 GTWTGT-------------MCLTEPHCGSDLGMLKCKAEPNEDGSYRISGTKIFISAGEH 202

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+   D     G  N +    +++K+G + +
Sbjct: 203 DMSENIVHIVLARLPDAPAGTKGISLFIVPKYHVDEQGNKGERNTVKCGSIEHKMGIKGS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G L+G  N     +     +  + + +  +S    S   A+ YA+ R  
Sbjct: 263 ATCVMNFDEARGILIGAPNRGLNCMFTFMNIARIGTGLEGLSASEASFQGALAYAQDRLQ 322

Query: 345 S----GG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSR 386
                G          +I  P ++R +           AL+       DE      A ++
Sbjct: 323 FRSMTGKKNADGPADPIIVHPDVRRMLLTQKAFAEGNRALAIYCMQLVDETLYGTDADAK 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A   ++ PI K +  + A    +  M+  GG GYI E  + +  R++   ++  G+
Sbjct: 383 QLADAKLSMLTPIVKAFLTETALETTSHGMQVYGGHGYIAEWGMEQLARDTRICTMYEGT 442

Query: 447 GNAMVLDVLNLLEKGTN 463
                +D+L     G+N
Sbjct: 443 TGIQAIDLLARKIMGSN 459


>gi|85858067|ref|YP_460269.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721158|gb|ABC76101.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 414

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 132/374 (35%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P            GL   +    +                        
Sbjct: 58  PRAIEIDENHSFPVHAR--DLFADLGLLSPLVPVEYGGTGMDITTFAMVLEEIGKVCAST 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++         + L  +P + + + P+              +K+++      TE   G
Sbjct: 116 ALMLLAQADGMLSIILDGSPALKEKYLPRF------------GEKSTLMTAFAATEPGAG 163

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ A+ ++  K  D  Y ++G K F+++  ++D   + A  +   G   +   + +   
Sbjct: 164 SDLLAMKTRAVKKGD-KYVINGQKCFITNGSVADILTVWAYTDPSKGAKGMSTFVVERGT 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL Y   + K+G R     EL F +       L+G+       +     +  +  A  +
Sbjct: 223 PGLIYGHNEKKMGMRGCPNSELFFEDLEVPAENLVGEEGKGFAYLMGALSINRVFCASQA 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ + R R   G  +     ++  IAD+A ++ AA  L  +     D   
Sbjct: 283 VGIAQGALERAMQHTREREQFGKPIAHLTPIQFMIADMATEVEAARLLVRKATTLLDAKD 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R        ++  + K +    A  V  +A++ +GGSGY++E  + R  RE+    I  
Sbjct: 343 KRG------PLIGGMAKTFASDTAMKVTTDAVQVMGGSGYMQEYQVERMMREAKLTQIYT 396

Query: 445 GSGNAMVLDVLNLL 458
           G+     +     L
Sbjct: 397 GTNQITRMVTGRSL 410


>gi|322818856|gb|EFZ26146.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 139/383 (36%), Gaps = 34/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+         +++     GL                   I A           
Sbjct: 51  PRARRMDEA--SAMEKEVIKELFEAGLMSIEIPAEHGGGDMSFFSSILAIEEISRVDPSV 108

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  + + L       +  + P + S              S      LTE   
Sbjct: 109 SVLVDVHNTLVNNIFLRFANSEQNAKFLPDLAS--------------SCVGCFCLTEAES 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-S 266
           G+D  A+ ++ +K  D         +  +   +D F+++A V+   G   +   + D   
Sbjct: 155 GSDAFALRTRAEKKGDRWVINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKRK 214

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
            +G+   R  +K+G R+++TVE+ F N       + NV     +  +I I  L+   + +
Sbjct: 215 SSGIHVGRPLDKLGLRASSTVEINFENCEVP---EENVIGEVGKGYQIAIATLNEGRIGI 271

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+        Y  +R      + D   ++   A  A +I AA  + +  A   
Sbjct: 272 GAQMVGIAQGAMDIVMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKK 331

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +S  +EAA A       K +  ++A    ++A+E  GG G+  +  + R YR++   
Sbjct: 332 LMGESFVKEAAMA-------KLFGSQVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIG 384

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
           +I  G+    +  +  L++K  N
Sbjct: 385 AIYEGTSIIQLQTIAKLIKKEYN 407


>gi|319442756|ref|ZP_07991912.1| acyl-CoA dehydrogenase domain-containing protein [Corynebacterium
           variabile DSM 44702]
          Length = 393

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 129/374 (34%), Gaps = 30/374 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + ++    P      R     G+   ++              ++               +
Sbjct: 33  KIEEARQFP--QDAFRMLGEIGVPGMVYPEELGGAGMPTELYLQTLEEIGALWASVAVGV 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S    S   +A   T    + W P++                +      L+E   G+D A
Sbjct: 91  SVHTPSCFPLATFGTREQQQRWLPEMLGG-------------TQVGAYSLSEAHAGSDPA 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLC 271
           A+  + ++  D         W  +   +D + ++A+  G  G    +   L      G  
Sbjct: 138 ALAMRARREGDSYVLNGSKAWVTNGGFADFYTVMARTSGEPGDGKGISCFLVPADTPGFS 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               + K+G   + T  L F +        +      ++    L  LDS  + +S     
Sbjct: 198 AGPPERKMGLTGSPTAALTFDDVRIPADQRIGEEGQGLK--IALAALDSGRLGISACATG 255

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           LA+     A+ YA+ R   G  +I+   +   +AD+   + ++ A     A   D  +  
Sbjct: 256 LAQGALDAAVDYAQERETFGQPIIEHQGLAFLLADMEAAVTSSRATMLAAARLKDLGEPF 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +EEA+ A+++           A  V  +A++ +GG+GY  +  + R+ RE+    I  G+
Sbjct: 316 AEEASMAKLVT-------TDGAMKVTTDAVQVLGGAGYTRDFPVERYMREAKVMQIFEGT 368

Query: 447 GNAMVLDVLNLLEK 460
                + +   L +
Sbjct: 369 NQIQRMVIARHLHR 382


>gi|126348648|emb|CAJ90373.1| putative acyl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
           23877]
          Length = 390

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 122/343 (35%), Gaps = 24/343 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  +    +     ++       A+L  G  +S    ++  +A   T     +  P +
Sbjct: 63  PYDADYGGGEQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALAAYGTKEQQIEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D A++ ++  +  D         W     
Sbjct: 123 LGG-------------GLLGAYCLSEPASGSDAASLRTRAVRAGDDWVITGTKAWITHGG 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
           ++D + ++A+  G  G   +   L      GL     + K+G + + T ++         
Sbjct: 170 VADFYTVMART-GEEGPRGITAFLVPADAEGLSAAVPEKKMGLKGSPTAQIHLDGVRVSD 228

Query: 297 -FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              LGD                L  A  ++   + +L EA+ YA  R   G  + D   +
Sbjct: 229 ARRLGDEGQGFAIALSALDSGRLGIAACAIGVAQAALDEAVSYAVERRQFGKPIADFQGL 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A  I A  AL    A   D     +++AA A       K  C   A  V  +A
Sbjct: 289 RFMLADMATQIEAGRALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 342 VQVLGGYGYTADFPAERYMREAKVLQIVEGTNQIQRMVIARHL 384


>gi|297670072|ref|XP_002813203.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like isoform 1 [Pongo abelii]
          Length = 621

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 81/484 (16%), Positives = 167/484 (34%), Gaps = 56/484 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDG 265
           A+I S+     D   Y L+G K W  +  ++  F + A+ E           +   + + 
Sbjct: 190 ASIRSRATLSEDKKHYILNGSKVWITNGGLASIFTVFAKTEVVDSDGSMKDKITAFIVER 249

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324
              G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   S
Sbjct: 250 DFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPV---ENILGEVGDGFKVAMNILNSGRFS 306

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  +   L          YA  R      L +  +++   A +A       ++++  A  
Sbjct: 307 MGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGM 366

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++  
Sbjct: 367 LDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRI 421

Query: 440 NSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-----LGSSGKKVITILRDSISL 493
             I  G+   + + + L  L+    +       ++Q      + ++G+++   L  ++ L
Sbjct: 422 LLIFEGTNEILRMYIALTGLQHAGRILTTRIHEIKQAKVSTVMDTNGRRLRDSLGQTVDL 481

Query: 494 CKEDKGLARFLTEKIALASS-------------AAALYRAGMNDIADVFLENRFLDNCHS 540
                G    +   +A +++                L R G   + +  +  R  +   +
Sbjct: 482 GLT--GNHGVVHPSLADSANKFEENTYYFGRTVETLLLRFGKTIMEEQLVLKRVANILIN 539

Query: 541 THCM 544
            + M
Sbjct: 540 LYGM 543


>gi|254283365|ref|ZP_04958333.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium
           NOR51-B]
 gi|219679568|gb|EED35917.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium
           NOR51-B]
          Length = 386

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 137/405 (33%), Gaps = 36/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            +V S  A     +A           P    WD     P     L ++   G        
Sbjct: 11  AFVGSAKAFSEGVLA-----------PNAAEWDATSHFPV--DALAQAGELGFMGMYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +                    ++    + SM+    T  V ++W P +    
Sbjct: 58  SAGGLELSRLDASLIVEELAKGCTTTAAFLTIHNMATSMIGKYCTEAVIEEWCPDLVMG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       +      LTE   G+D A++ +      D  Y ++G K F+S      
Sbjct: 117 ------------TKLASYCLTEPGAGSDAASLRTSAAADGDD-YVINGSKVFISGAGETD 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            +++    G  G   +  +L      G+ Y + + K+G ++  T  + F +        L
Sbjct: 164 VLVVMLRTGDAGPKGISAVLIPADAEGISYGKNEEKMGWKAQPTRMVTFEDVRIPKTNRL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+         +      ++ A  S+   + +L +A  Y + R      + D    +  +
Sbjct: 224 GEEGQGFAIAMEGLDGGRINIATCSIGTAQKALEDATAYTQERKQFNSAIADFQATQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A D+ AA  +    A   D         + A     + K +       +  +A++  
Sbjct: 284 ADMATDLVAARQMVRLAAWKLDNKD------SQATTYCAMAKRFATDAGFTICNDALQLF 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           GG GYI+E  + R+ R++  + IL G+   M + +   L     L
Sbjct: 338 GGYGYIKEYPLERYVRDTRVHQILEGTNEIMRVIIARRLLMEGAL 382


>gi|219669670|ref|YP_002460105.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219539930|gb|ACL21669.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 584

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 84/468 (17%), Positives = 166/468 (35%), Gaps = 62/468 (13%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ------AHKIRAARLYLMAQLEAGHLMSPSVT 157
             L++ +   GL+       ++ +   +      A  I     + M Q     + S    
Sbjct: 61  KQLIQEAGELGLNGLDIPEEYDGLDLDKISTTIVAECIGKGGSFAMTQGGHTGIGSM--- 117

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               + +  T    K + P I S E              A    LTE   G+D  +  ++
Sbjct: 118 ---PIVMFGTHEQKKKYLPGIVSGE-------------KAGAYALTEPGAGSDAMSAKTR 161

Query: 218 GQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                DG  Y L+G K F+++   +D FI+ A++ G          + D    GL     
Sbjct: 162 ADLSPDGKYYLLNGTKQFITNSAFADLFIVYAKIAGDKY----TAFIVDADSEGLSLGPE 217

Query: 276 KNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G + ++T ++   N    +     ++        ++  L     A  ++   + +L
Sbjct: 218 EKKMGIKGSSTRQVILDNVKVPVENILFEIGRGHIVAFNILNLGRYKLAANALGASKHAL 277

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------EAK 384
             A  YA  R   G  + +  ++K  +A +A+      ++ +R     D          +
Sbjct: 278 ELAAAYANERKQFGTPIANFGLIKEKLAKMAIKTYVMESMLYRTGGLLDGILHGLDTSGE 337

Query: 385 SRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  + AA           + K +  +    V+ E ++  GG GY  E SI R YR++   
Sbjct: 338 NGGQVAAKGIEEYALECSMNKIFATEAQGYVVDEGVQIHGGYGYCSEYSIERLYRDARIY 397

Query: 441 SILLGSGNAMV----LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            I  G+         + +L   +KG    ++    L++ + + G              +E
Sbjct: 398 RIFEGTNEINRTIIPITLLRRADKGDLPLQEAVQKLKEYIAAGG------------AARE 445

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           D+       + + L + AA L + G N   +  +  +  D       M
Sbjct: 446 DEAGLIQAAKDMFLLTMAAGLQKYGKNLQKEQEIVGKLADLAIQAFAM 493


>gi|300693600|ref|YP_003749573.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299075637|emb|CBJ34934.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 385

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 133/357 (37%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    A +                +   +V   S  + +  T   
Sbjct: 46  EMGLFGLSIPEAYGGIGLSMAQECEVVYDLGHTSFAFRSVFGTNVGIGSQGILMDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P+I S E             + I   LTE   G+D A++ ++     D       
Sbjct: 106 KAAYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATLDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMARTGGE-GAGGISAFIVPADTPGIALGKPDRKMGQRGTKTCDVM 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A+ YA+ R 
Sbjct: 212 LDNVRVPAANIIGGVAGQGFKTAMKV---LDRGRLHISALACGMAHRLITDAVAYAKERR 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK   ++     ++A  TK +
Sbjct: 269 QFGQPIADFQLIQAMLADSQAELYAGLSMVRDCARRYD-AKPAGKQDHEVSMLASCTKLF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GY+ E  + R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYVAEYKVERFYRDVRLLRLYEGTTQIQQLIIAKHLLR 384


>gi|226226698|ref|YP_002760804.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089889|dbj|BAH38334.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 394

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 141/400 (35%), Gaps = 33/400 (8%)

Query: 65  VLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +L+ T QE+ R+A +Y   +L       ER  +  F  +    +      G    +    
Sbjct: 5   LLNETQQEIRRLARDYAQRELVPM--AAERDREARFDRSMVQQM---AELGFFGMLIPEQ 59

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSRE 182
           ++ +       + A     +    A  L+S   +    M+           + P      
Sbjct: 60  YDGLGLDAQSYLLALEEIAVGDSSAAVLLSVHNSLPTQMILNFGNEEQRTRFLP------ 113

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  PM +  +     L+E   G+D  ++ +Q  +  D         W      +  
Sbjct: 114 -------PMARGELLGAFCLSEPEAGSDAGSLATQAVREGDEWVLNGTKAWVSHGNEAGV 166

Query: 243 FIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
            + +A+ +    R G   +   +      G    + +NK+G R++ T+++   N      
Sbjct: 167 LLCMARTDAPGARKGSKGISTFILTPDLPGFHLTKKENKLGLRASPTLQIVLDNCRVPAD 226

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+                L  A  ++   R +L  +  YA  R   G  + +   ++
Sbjct: 227 RLVGEEGRGLTYALGSLDHGRLGIASQAIGIARAALEASARYAGERKQFGKSIGEFQAIQ 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  I AA  L    A + +  +  +         + + K +  + A  V  +A+
Sbjct: 287 FKLADMATRITAARTLLHTAAAAKERGEKVTR-------YSSMAKLFATETAMWVTTQAV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG GY+ +  + R+ R++    I  G+     + +  
Sbjct: 340 QIFGGYGYVTDYPVERYMRDAKVTEIYEGTSEIQRIVIAR 379


>gi|193782672|ref|NP_436012.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|307304464|ref|ZP_07584215.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|307318172|ref|ZP_07597608.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|193073128|gb|AAK65424.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306896213|gb|EFN26963.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306902666|gb|EFN33260.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 380

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 81/378 (21%), Positives = 138/378 (36%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  PA   L       GL                         Y +   E 
Sbjct: 24  PMAESLDREERFPA--ELYGEMAKLGLFGIGVPEHLGGPGFDT-------LTYAVVMEEL 74

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               +       +V L++T  V           E        +   S  +   +TE   G
Sbjct: 75  SRGYASVADQCGLVELISTLLVRH-------GTEGQQRMLPDVLNMSAKVAYCITEPEAG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD++ I +  ++  DG     G  W  ++P++D   +LA+ +   G   +   + D +  
Sbjct: 128 TDVSGIRTTAERDGDGWMLNGGKIWIHNAPVADVGFVLARTDKEAGNRGMSIFIVDLNSA 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     ++K+G R++    L F++     G LLG        +  +     +  A ++V
Sbjct: 188 GVERGPKEHKMGQRASQVGALTFTDVRLPGGALLGQEGRGFHMMMSVLDKGRVGIAALAV 247

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA  R   G  + D   ++  +AD+A DI AA  L    A+  D    
Sbjct: 248 GIAQAGLEAAVDYAGTRKQFGKAISDFQGVQWLLADMAKDIEAARLLVHSAASKIDRGLD 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++          I K +   MA    A+A++  GGSGYI    + R YR++    I  G
Sbjct: 308 ATKA-------CSIAKCFAGDMAVQRTADAVQVFGGSGYIRGFEVERLYRDAKITQIYEG 360

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     + +   L K   
Sbjct: 361 TNQIQRMIIARELLKKGA 378


>gi|159901273|ref|YP_001547520.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894312|gb|ABX07392.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 386

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 78/371 (21%), Positives = 143/371 (38%), Gaps = 24/371 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+W+     P  HAL ++          +  ++        + +  A      
Sbjct: 22  REINPFVEQWEHERAFPG-HALFKKLGELDALGVSYPEAYGGAGLDYWYNVVLAE----- 75

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G+     V  A  V   M TP +      +  S E      AP  +  +   + ++
Sbjct: 76  --ELGYADCGGVPMAIAVHTDMATPALA-----EFGSDELRQRFLAPAIRGEMIAAVAIS 128

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+AAI ++  +  D         W  +   +D   +LA+     G   +  L+ 
Sbjct: 129 EPDAGSDVAAIRTRAVRDGDEYVINGHKMWITNGTQADFITLLARTSDEPGYKSMSLLIV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
             +  G    +   K+GN S+ T  L F +    +   +     G V  M+      L  
Sbjct: 189 PTNTPGFHVSKKLEKLGNHSSDTALLAFDDVRVPVANRIGDEGQGFVLQMQQFQKERLIG 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +VS M   +    HY R R   G  LI+   ++  +A++  +I A   L++      
Sbjct: 249 AVSAVSAMERIVEMTSHYCRERQTFGKPLIENQYIQFRLAELLTEIEALRQLNYHCTRLL 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 ++E + A++ A        ++A  V    ++  GG GY+EE  +AR++R++   
Sbjct: 309 LAGHDITKEVSMAKLKAG-------RLAREVADTCLQFHGGMGYVEEYPMARYFRDARLL 361

Query: 441 SILLGSGNAMV 451
           SI  G+   M+
Sbjct: 362 SIGGGADEIML 372


>gi|21243295|ref|NP_642877.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108834|gb|AAM37413.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 597

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 92/527 (17%), Positives = 182/527 (34%), Gaps = 69/527 (13%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
                     D L   AL A                ++    +E  R  +     L++  
Sbjct: 7   PLTDFRFALHDVLGAQALFARLGY------TEASTDIIDAVLEEAGRFTSQVLAPLNSVG 60

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G  +DK    V   P + A   + +  G +    +  F          +  + +   
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G+    S  +   +           +   +    +  T             + LT
Sbjct: 121 ANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRWTGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         
Sbjct: 168 EPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G  +    
Sbjct: 228 ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQ 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L   +  +     +   A+ Y+R R  S               +I  P +
Sbjct: 288 AMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKSPDKPADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAP 409
           +R +  +      +  L+   A+  D A        R++       + PI+K    + + 
Sbjct: 348 RRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSI 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQ 467
                A++C GG GYI E  + +  R++   +I  G+     LD++      +     + 
Sbjct: 408 ENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKL 467

Query: 468 LFSTLE-----QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             + +E     QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 468 FLADVETFANAQDGNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|312139134|ref|YP_004006470.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888473|emb|CBH47785.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 377

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 85/413 (20%), Positives = 141/413 (34%), Gaps = 42/413 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           PS    E+  L E       +E+                  E+W+          + R +
Sbjct: 2   PSWHDDEVRALSELAAGFFEREVV--------------AHNEKWEAQRHID--RDVWRTA 45

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL C      +       AH +        A   A  +   S   A  V    T   
Sbjct: 46  GKLGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYAGDLAFGVSVHSGIVAHYVNEYGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P + S E             +   +G+TE   G+D+ AI +   +  D  Y ++G
Sbjct: 106 KRTWLPGMASGE-------------ILGAIGMTEPGAGSDLKAIRTTAVRDGDH-YVVNG 151

Query: 231 HKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++  S   I+LA + + + G   V  L+ D     G    R+ +K+G  +  T E
Sbjct: 152 SKTFITNGSSADMIVLAVKTDPKAGARGVSLLIVDLRDCPGFTVGRVLDKVGQHAADTSE 211

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F +       LLG+     G +    +   L  A  +   M  ++ E + Y + R   
Sbjct: 212 LSFVDVKVPVSNLLGEEGQGFGQLIAQLVQERLIIAAQASGAMNRAVEETVAYVKSRQAF 271

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L +       +A+                      +  + EAA A       KYW  
Sbjct: 272 GHSLFEFQNTAFELAECQTIARTCEVFLDHCIQEHLRGELDAAEAAMA-------KYWLT 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                V+   ++  GG GY+ E  +AR Y ++    I  G+   M   +   L
Sbjct: 325 DKQCEVVDRCVQLHGGYGYMREYLVARMYEDARVQKIYAGANEVMKGIIAKSL 377


>gi|300711832|ref|YP_003737646.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125515|gb|ADJ15854.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 379

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 150/399 (37%), Gaps = 25/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            + LS   +   R A     +     P     D+ + +PA   L+  +    L       
Sbjct: 2   AFTLSGEHR-AIRDAVREFGE-EEIAPVAREHDERKEYPA--DLIEEAARYDLVAPNIPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +                   A    G  +      ++M+       +  +W   I S E
Sbjct: 58  EYGGPGMDILSSAIVTEELWRADPGIGSAIGSRGFGSNMILEFGDEWMKSEWLTAIASGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                         A    ++E   G+++A + ++ ++  D         W  +  ++D 
Sbjct: 118 -------------SACASAISEPAHGSNVAGMETRAERDGDEWVIDGNKMWITNGTVADV 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            +++A+ +   G   +   L      G   +++ NK+G R++   EL   +       ++
Sbjct: 165 AVVMAKTDPDAGKRGITAFLVPTDTEGFRAEKIDNKLGIRASDLAELLLDDVHVPEENVI 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G++N     + +      +  A  +V   + +L  A+ YA  R      + +   ++  +
Sbjct: 225 GEVNEGFYQLMNFFGSGRVSVAAQAVGAAQGALDAALEYAGEREQFDRKIAEFQAIEHKL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A ++ AA +L++R A+   +   R+     A   A + K +  + A  V  E+++  
Sbjct: 285 AEMATNVEAARSLTYRAASEVTDGDQRT-----AMKFASMAKLFASEHAVDVADESIQVH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+GY+ + +  R+YR++    I  G+       + + L
Sbjct: 340 GGAGYVTDHAAERYYRDARITKIYEGTSEIQKNIIADGL 378


>gi|110832882|ref|YP_691741.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110645993|emb|CAL15469.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 383

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 140/398 (35%), Gaps = 29/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   Q     A   +     + P    WD   + P     +R++   G      D     
Sbjct: 6   TEEQQAFRETARQFSE--KEFSPYAAEWDAKSYFP--KDAIRKAGELGFCALYCDEEHGG 61

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +   +                    ++    +  M+           WA  + S E    
Sbjct: 62  MGLSRLDAALIFEQLSQGCTSTTAFITIHNMATWMLTRFGNDATRSRWAEALMSGE---- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIM 245
                          LTE   G+D A +++  +K  +G Y L+G K F+S    +D  ++
Sbjct: 118 ---------KLASYCLTEPNAGSDAAGLSTTAKKD-NGDYVLNGAKAFISGAGDTDVLVL 167

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
           +A+  G  G   V          G+ Y R + K+G +S  T  +   +       L+G+ 
Sbjct: 168 MART-GGPGAGGVSCFAVPADAPGVSYGRNEAKMGWKSQPTRAVILEDVRIPAECLIGEE 226

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                          ++ A  S+   + +L +A  Y + R   G  + D   ++  +AD+
Sbjct: 227 GQGFKIAMGGLDGGRINIASCSLGAAQAALHQAQQYVQERKQFGQAISDFQTVQFTLADM 286

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA  +    A   D+  S         ++  + K     +   V   A++  GG 
Sbjct: 287 ATELVAAQQMVRLAAWKLDQNHSDK------SMLCAMAKRMATDLCFNVCNHALQLHGGY 340

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GYI E  + R+ R++  + IL G+   M + +   + K
Sbjct: 341 GYITEYPLERYLRDARVHQILEGTNEIMRVIIARNVLK 378


>gi|226356458|ref|YP_002786198.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226318448|gb|ACO46444.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 400

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 135/382 (35%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    P    ++R     G+  +     +       A                
Sbjct: 37  PGAAERDQTSEFP--FEIVRELGEMGIMGAQTPEQYGGSGLDTATFAMIIEEIAAVDGSL 94

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + +  T      + P + S                    GLTE   
Sbjct: 95  CLTVASHNSLCQGHILIGGTEAQKAKFLPDLAS-------------AKKLGAWGLTEPGS 141

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D   + S+  +  DG + L+G K F++   +   +++LA+ +    G+     +   +
Sbjct: 142 GSDSGGMQSRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDAAREGKGKNDGISAFV 201

Query: 263 EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
            +     G    R ++K+G RS+ T +L F +        L        + MK+L    +
Sbjct: 202 FNRDEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFKDVMKVLDGGRV 261

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A M +   R +   A  Y   R   G  +     +   +AD+   + AA  L  + A+
Sbjct: 262 GIAAMGLGLGRAAFEYAAKYTMTREQFGKPIGHNQNLAFRLADMDTKLEAARLLIRKAAD 321

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  ++ +   A A       K +   +      EA++ +GG GYI+E  + R +R++ 
Sbjct: 322 LKDAGQNFTVPVARA-------KLFATTVGVEACDEAIQMLGGYGYIKEYPVERFWRDNR 374

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     L +   + K
Sbjct: 375 LTRIGEGTDEVQRLVISRDVLK 396


>gi|170106339|ref|XP_001884381.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82]
 gi|164640727|gb|EDR04991.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82]
          Length = 370

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 135/357 (37%), Gaps = 32/357 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPR 169
              GL        +          I A             L     T  + V     +  
Sbjct: 36  YEQGLMGIETSAEYGGAESSFTSAIIAIEELAKVDPSVSVLCDVHNTLVNTVLRKYGSKE 95

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               W P++                S      L+E   G+D  A+ ++ +K  D      
Sbjct: 96  QQDKWLPQL--------------AQSKLGSFCLSEPASGSDAFALQTRAKKDGDNWIING 141

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +S  ++ F++ A ++   G   +   L      G+   + + K+G R+++T  L
Sbjct: 142 SKMWITNSYEAEIFLIFANIDTTKGYKGITCFLATKDM-GIQIAKKEQKLGIRASSTCTL 200

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
            F +     +   NV  G     KI I  L+   + ++   + LA+     A+ Y  +R 
Sbjct: 201 NFDD---LKIPAENVIGGEGRGYKIAIEILNEGRIGIAAQMLGLAQGAFEKAVPYTYQRQ 257

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     M   IA  A++I +A  +++  A   +E K+ ++EAA A       KYW
Sbjct: 258 QFGQPIGTFQGMAFQIAQAAIEIESARLMTYNAARRKEEGKTFTKEAAMA-------KYW 310

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              +A  V  +A+E  GG G+  E  I +++R+S   +I  G+ N  +  +   ++K
Sbjct: 311 SSVVAQRVSGQAIEWAGGVGFTRETGIEKYWRDSKIGAIYEGTSNIQLQTISKFIQK 367


>gi|255318756|ref|ZP_05359982.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|255304012|gb|EET83203.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
          Length = 390

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 139/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    PA   L ++    GL        +    +   AH +    +   +   
Sbjct: 31  PLAAKADQDNLFPA--QLWKKMGDMGLLGMTVSEEYGGSNMGYLAHILVMEEISRASASI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCINQIHRHGTEAQKQRYLPKLVSGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++T +  +  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMTLRADQKGDHYVLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  + +  +K+G R + T  L F +        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGQHLDKLGMRGSNTYPLFFDDCKVPAENVLGGVGNGVKVLMSGLDYERAVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   + Y   R   G  L +  +M+  IAD+     A  AL + +  + D   
Sbjct: 256 LGIMDACLDIVMPYLHERKQFGQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD--- 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R++     R  A     +  + A  +  EA++ +GG+GYI + +  R +R++    I  
Sbjct: 313 -RADHGRALRKDAASAILYSAEKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETA 390


>gi|254466164|ref|ZP_05079575.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium
           Y4I]
 gi|206687072|gb|EDZ47554.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium
           Y4I]
          Length = 379

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 146/400 (36%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q +  MA           P   +W+K    P   +L  +    G        
Sbjct: 2   DFALTEEQQAIFDMAQAFG--QENIAPHSRQWEKDGTIP--KSLWPQLAELGFGGLYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +      +           MA    G  +S       M+    +    + W P + S E
Sbjct: 58  EYGGSGLSRLDATLVFEALAMADPAVGSFLSIHNMCGGMIDKFGSAETKQKWLPSLCSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                              LTE   G+D AA+ ++ ++ +DG Y L+G K F+S    SD
Sbjct: 118 -------------KIFSYCLTEPGSGSDAAALKTRAERTNDG-YSLNGTKAFISGGSYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           A++++ +  G  G   +  ++ +    GL +  L++K+G ++  T +++F +       L
Sbjct: 164 AYVVMCRT-GEDGPKGISTVVVEDGNPGLSFGALEDKMGWKAQPTSQVQFDDCAIPADHL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ +  ++ G + +L + + Y   R   G  +     ++  
Sbjct: 223 IGEEGKGFSYAMAGLDGGRLNISAGALGGAQAALDQTVQYMSERKAFGKSINQFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+    + AA     + A   D        A  A     + K      A  V    ++ 
Sbjct: 283 LAEYETRLQAARTFLRQAAWKLDTG------AHDATKFCAMAKLMVTDTAFDVANGCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  + +  R+   + IL G+   M L V   L
Sbjct: 337 HGGYGYLADYGVEKIVRDLRVHQILEGTNEIMRLIVARQL 376


>gi|163840883|ref|YP_001625288.1| acyl-CoA dehydrogenase, long-chain specific [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954359|gb|ABY23874.1| acyl-CoA dehydrogenase, long-chain specific [Renibacterium
           salmoninarum ATCC 33209]
          Length = 382

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 78/414 (18%), Positives = 149/414 (35%), Gaps = 43/414 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           PS ++++L+ L +       +E A              P  ERW++ +       L  ++
Sbjct: 6   PSWMNEDLDALADLAREFYTKEAA--------------PNEERWNEQQHVD--RELWTKA 49

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G+HC      +        H+       + A   +      +V  A  +    T   
Sbjct: 50  GELGMHCLSIPEEYGGGGGDYRHEAVVVTEQMRALAPSFGASLHNVIVAHYLNAYGTEAQ 109

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W PK+ + EY                + +TE   G+D+ ++ +  +      Y ++G
Sbjct: 110 KQNWLPKMATAEY-------------IGAIAMTEPGTGSDLQSVRTSAKLDGKE-YVING 155

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVE 288
            K F+++  +S+  +++A+     G   +  +  +     G    R   KIG     T E
Sbjct: 156 AKTFITNGFLSNFIVVVAKTTEEGGSGGISLIAVETDKVEGFRRGRNLRKIGQHGQDTCE 215

Query: 289 LEFSNTFGFLLGDLNVS--TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F +        L      G ++ M+ L    L    M+ + +  S   A+ YA+ R  
Sbjct: 216 LFFDDVRVPAENLLGGEPNKGFIQLMQQLGQERLLIGTMAAANIEKSGQLAVQYAKERQA 275

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++     K  +A+     + A A         DE  ++          A   K+W 
Sbjct: 276 FGKPILSFQNTKFVLAECDTIASIAWAF-------HDECVAKHIVGELDVPTASKAKWWL 328

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    V    ++  GG GY+EE  I R + ++    I  G+   M   +   L
Sbjct: 329 TEQQNIVADRCLQIFGGYGYMEEYPIGRIFADARVQKIYGGTNEIMKELISRSL 382


>gi|239932220|ref|ZP_04689173.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440583|ref|ZP_06579973.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343478|gb|EFE70434.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 383

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 137/397 (34%), Gaps = 35/397 (8%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              + LAR        P   A+    E  D+         ++ +    G      D  + 
Sbjct: 10  EAVRRLARDFVEREVVPYATAWDR-AEEVDR--------GIVEKLGALGFLGLTIDEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                    ++S S+   A  VA   +    + W P + S    
Sbjct: 61  GSGGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVAAWGSEEQKRTWLPGLTSG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                     +     GLTE   G+D   ++++  +  D         +  +   +D  +
Sbjct: 118 ----------AYVGCFGLTEPGTGSDAGNLSTRAVRDGDDYVVNGTKMFITNGTWADVVL 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+     G   V   L      GL  + +  K+G R  AT EL   +        L  
Sbjct: 168 LFARSTDAPGHRGVSAFLVPADAPGLTRRAVHGKLGLRGQATAELVLEDVRVPASAMLGP 227

Query: 304 VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    +  L    +  A   V   + +L  A+ YA  R   G  +    +++  I+D
Sbjct: 228 EGKGFPVALSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELISD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           IA+D+ AA  L++R+A+  D  K  + E++ A       K +  + A      A++  GG
Sbjct: 288 IAVDVDAARLLTWRVADLIDRGKPFAVESSKA-------KLFASEAAVRAANNALQVFGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GYI+E    +  R++   ++  G+     L +   L
Sbjct: 341 YGYIDEYPAGKLLRDARVMTLYEGTSQIQKLVIGRAL 377


>gi|212636203|ref|YP_002312728.1| isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557687|gb|ACJ30141.1| Isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 389

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 132/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +        AH +    +   +        + S    + + 
Sbjct: 47  ELWPVLGDMGLLGVTVSEEYGGADMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQIN 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + PK+ + E+                L ++E   G+D+ ++    +K  D
Sbjct: 107 RNGNSEQKAKYLPKLITGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +  +++ A+ +   G   +   + +    G    +  +K+G R 
Sbjct: 154 RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVERGFKGFTQAQKLDKLGMRG 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----H 337
           + T EL F         + N+  G    +K+L+  LD   + +SG  + +  A       
Sbjct: 214 SNTCELVFEECEVP---EENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMTACMDIVVP 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +    +++  +AD+   + AA +  + +A S D  ++  ++AA A    
Sbjct: 271 YIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAKSCDRGETTRKDAAGA---- 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  ++A  +  +A++ +GG+GY+ E +  R  R++    I  G+     + +   
Sbjct: 327 ---ILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGRE 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|103487255|ref|YP_616816.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977332|gb|ABF53483.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 580

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 116/595 (19%), Positives = 208/595 (34%), Gaps = 90/595 (15%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV--ALIANFPSVVHKELELLGEYVLSCT 69
           M      ++ LF LN        +    D++       A  P +V   +  +GE+     
Sbjct: 1   MTYTPPTAEQLFVLN--------HIARIDAMAQHDRFAAATPDMVEAIVAGIGEFAA-EV 51

Query: 70  AQELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              L R+ +   P+          WD  KV   P +    +  +  G         +   
Sbjct: 52  YAPLNRVGDTQPPK----------WDNGKVTMPPGFKEAYKAFVEAGWGSIDGPGDYGGQ 101

Query: 128 VRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 A  +  A            +++P    A M     T    + W PK+ + E++ 
Sbjct: 102 DLPFTLATVVIEALGSANMGFSLCSILTPGAIHALMA--YGTEEQRQTWLPKLITGEWNG 159

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD 241
           T             + LTE   G+D+ A+ S  +K+++G    +Y + G K F++    D
Sbjct: 160 T-------------MNLTEPAAGSDVGALRSTAEKVTEGEHAGLYRIKGQKIFITFGEHD 206

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNA 285
                  ++LA+  G       +  FLVP+   D        NG+    +++K+G   + 
Sbjct: 207 LTDNIVHLVLARTPGAPEGTRGISLFLVPKYRLDADGNPTISNGVHCASIEHKLGIHGSP 266

Query: 286 TVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + +    +  G ++G+       +  M     L      +     ++ +A  +A  R
Sbjct: 267 TAVMVYGEDEDCLGEIVGEEMGGMRAMFVMMNNARLMIGCQGIQIGERAMQQAQRFAAER 326

Query: 343 HVS---GGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-Y 392
             S   G        +   P +KR +  +     AA AL +  A   D  K   E AA  
Sbjct: 327 VQSALAGSPDRTPVTIDKHPDVKRMLWRMRAQTEAARALVYYAAAQTDFGKLGDEAAASR 386

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV- 451
           A ++ P+ K     +   V +  ++  GG G+IEE   A+HYR++    I  G+      
Sbjct: 387 ADVLIPLAKAHATDIGCEVASLGIQVHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAA 446

Query: 452 -LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--EDKGLARFLTEKI 508
            L    L   G +L   L   + +     G      L+  +  C+   D  +     +++
Sbjct: 447 DLVGRKLGMAGGDLVRALIDDIAR-----GAADFPELQQLVEACRTVTDWMVGANTADRL 501

Query: 509 A--------LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           A        LA++      A  +  A   L     D       +   RF  A I+
Sbjct: 502 AGSYPYLTMLATATCGWLMAIQHRAARTALAEGSGDRAFLNAKLTSTRFYLAQIV 556


>gi|126436663|ref|YP_001072354.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236463|gb|ABN99863.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 138/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQ 145
           P  ERW  D++    A+ A    +   GL        +    V                 
Sbjct: 27  PNAERWESDRIVDRSAYVA----AGKYGLIGFNMPEEYGGGGVDDFRFNAVIDEEIARYG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A  L   +       + +      K W P I S E             + + + +TE 
Sbjct: 83  GPAPSLSLQNDVVGPYFSGLADDDQKKRWLPGIISGE-------------LIVAVAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A I +   +  D  + ++G K F+SS +  D  +++ + +   G      L+ +
Sbjct: 130 GAGSDLAGIKTSAVRDGDD-WIVNGSKTFISSGINCDLVVVVCRTDPEAGHKGFTLLVVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R  +K+G     T EL F +       LLG        +        L  A
Sbjct: 189 DGMEGFTRGRKLDKMGLHYQDTAELFFEDVRVPAANLLGKEGRGFYHLMHNLPSERLSIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +++G R +  + + YA+ R   G  + +    +  +A++  ++        R   +  
Sbjct: 249 ISAIAGARETFRQTLQYAKDRKAFGQSIGNFQHNRFLLAEMDTELEIGEQYIDRCLQAVV 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + EA+ A+        WC + A  VI   ++  GG GY+ E  +AR Y ++   +
Sbjct: 309 DGELTAVEASKAKW-------WCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMT 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 362 IFGGTTEIMKDIIGRDL 378


>gi|332187101|ref|ZP_08388841.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332012801|gb|EGI54866.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 388

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 149/395 (37%), Gaps = 29/395 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             + ++ R A           P   R D  ++ P    +       GLH    D +   +
Sbjct: 10  GESADMIRDATRRFA-ADRIAPLAARMDAEDWFP--RDIWPEMGALGLHGITVDEADGGL 66

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H +    +   +        + S    + +    +P     + P + S E+   
Sbjct: 67  GLGYLEHVVAIEEVSRASASLGLSYGAHSNLCVNQIRRWGSPEQKAKYLPGLISGEH--- 123

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        L ++E   G+D+ ++  +  ++  G        W  ++P +D  ++ 
Sbjct: 124 ----------VGSLAMSEVSAGSDVVSMKLRATQVEGGWRLNGTKFWITNAPYADTLVVY 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLN 303
           A+     G   +   L D    G    +  +K+G R + T EL F++ F     ++G +N
Sbjct: 174 AKT--GEGSRGITAFLIDKDMAGFSIGQKIDKMGMRGSPTAELVFNDCFVADEQVMGPVN 231

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G +           A + +  M+  L   + Y R R   G  + +  +++  IAD+ 
Sbjct: 232 GGVGVLMSGLDYERAVLAGIQLGIMQACLDVVVPYVRERRQFGRAIGEFQLIQAKIADMY 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + + +A A  + +A S D  ++   +AA A ++A        + A  V  EA++ +GG+G
Sbjct: 292 VALNSARAYVYAVARSCDAGRTTRFDAAGAILLA-------SENAVKVSLEAIQALGGAG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y ++  + R  R++    I  G+     + +   L
Sbjct: 345 YTKDWPVERFARDAKLLDIGAGTNEIRRMLIGREL 379


>gi|221118085|ref|XP_002160610.1| PREDICTED: similar to Isobutyryl-CoA dehydrogenase, mitochondrial
           [Hydra magnipapillata]
          Length = 288

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 123/309 (39%), Gaps = 25/309 (8%)

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A ++    +  +  ++ P + S E                   LTE   G+D +++++
Sbjct: 1   MVAGLIENYGSSFLKDNFLPSLVSCE-------------KIASYCLTEPDSGSDASSLST 47

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             ++  D  Y L+G K F+S    SD + ++A+  G  G   +   L +    GL + + 
Sbjct: 48  NARQDGDH-YILNGSKMFISGAGESDIYAIMAR-SGGPGSKGITCFLVEKGTAGLEFGKK 105

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G  S  T  +   N       ++G          +      +  A  S+   + SL
Sbjct: 106 EKKVGWNSQPTRSVILDNCKVPAKNIIGQRGQGFNIAMNALNGGRISIASCSLGAAQKSL 165

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y + R   G  L D    +  +A++  ++ A+  L    A + D  +S       
Sbjct: 166 DLALDYVKSRKQFGKPLADFQNTQFKLAEMLTNLTASRLLVRHAATAIDNHQSN------ 219

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++A + K         +   A++  GG GY+++  + +  R++  + IL G+   M +
Sbjct: 220 APVLAAMAKLQATDKCFELCNTALQLHGGYGYLKDYQVQQFMRDTRVHQILEGTNEVMKI 279

Query: 453 DVLNLLEKG 461
            +   L  G
Sbjct: 280 IISRDLING 288


>gi|21241039|ref|NP_640621.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106331|gb|AAM35157.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 387

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 147/403 (36%), Gaps = 33/403 (8%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE +     + +A  A+++   L          D V   PA   L R     GL    
Sbjct: 9   ELGEEI-DLLRESVAAFASHHIAPL----AAAADHDNV--FPA--QLWRLLGEQGLLGLT 59

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            + ++        AH +    +            + S    + +    +    + + PK+
Sbjct: 60  VEDAYGGSGMGYLAHVVAMEEISRAGGAIGLSYGAHSNLCLNQLRKNASHAQKQRYLPKL 119

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  +     D         W  + P
Sbjct: 120 CSGEH-------------VGALAMSEAGSGSDVVSMKLRADARGDRFVLNGSKMWITNGP 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ +   G   +   + +    G    +  +K+G R + T EL F++     
Sbjct: 167 DADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFTDCEVPA 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L    G    +   +  +  +++   +  M  ++   + Y   R   G  +    +M
Sbjct: 227 ENVLGTLNGGARVLMSGLDFERVVLAGGPLGLMAAAMDVVLPYVHERKQFGEPIGTFQLM 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + + A  A  + +A + D  ++  ++AA A         +  + A  +  +A
Sbjct: 287 QAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGA-------ILYAAEKATWLTGQA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GYI +    R +R++    I  G+     + +   L
Sbjct: 340 IQVLGGNGYINDYPTGRLWRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|86138798|ref|ZP_01057370.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824445|gb|EAQ44648.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 381

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 138/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+     P    L  R    G                +           MA    
Sbjct: 26  PFARQWEAEGTIP--KELWPRVGELGFGGLYVSEETGGSALSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P + S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDSFASDEMKARIMPDVLS-------------LNTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ +K ++G Y L+G+K F+S    SDA++ + +  G  G   +  +  +   
Sbjct: 131 SDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRT-GEEGPKGISTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L+ K+G +S  T +++F +       L+G+                L+ +  S
Sbjct: 189 KGLSFGGLEEKMGWKSQPTAQVQFDDCKIPANNLVGEEGKGFKYAMMGLDGGRLNISSCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D+  
Sbjct: 249 LGAAQTALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQAAWKLDQG- 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A  A     + K +  +    ++ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 308 -----ALDASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   L
Sbjct: 363 GTNEIMRVIVARHL 376


>gi|325673562|ref|ZP_08153253.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555583|gb|EGD25254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 405

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 81/392 (20%), Positives = 147/392 (37%), Gaps = 36/392 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A              PG   WD+ +  P    +LR++   G+       
Sbjct: 31  ERAISDTARDFAAE---------YLAPGAIEWDQNKHFPV--DVLRKAGALGMGGIYIRE 79

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
             +     +   +R               +S       M+         + W P + S E
Sbjct: 80  DVDGSGLTRLDGVRIFEQLATGCPSIAAYISIHNMVTWMIDEFGDDEQRRRWVPGLASME 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA++++  +  D  Y L+G K F+S    SD
Sbjct: 140 Q-------------LGSYCLTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSD 185

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++           L
Sbjct: 186 VYVVMART-GAAGARGISAFIVPKDTPGLSFGANEKKMGWNAQPTRQVILDQVRVPAANL 244

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  SV G + +L +A+ Y   R   G  L++   ++  
Sbjct: 245 LGGEGEGFRIAMKGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFR 304

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +++ AA  L +R A++ D   +   E      +  + K +       V  EA++ 
Sbjct: 305 LADMRIELEAARTLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQL 358

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  + +  R+   + IL G+   M
Sbjct: 359 HGGYGYLAEYGLEKIVRDLRVHQILEGTNEIM 390


>gi|146282285|ref|YP_001172438.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145570490|gb|ABP79596.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 383

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 141/405 (34%), Gaps = 41/405 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIW 120
           + ++   A++ AR             P  + W+K      W   AL+ +    GL   + 
Sbjct: 10  QRMIRDMARDFAR---------REIAPHAQAWEKA----GWIDDALVAQMGELGLLGMVV 56

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIF 179
              +            A           G LMS   +      L   +     +W  ++ 
Sbjct: 57  PEEWGGSYIDYVAYALAVEEISAGDGATGALMSIHNSVGCGPVLNYGSQAQKDEWLAELA 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S                     LTE + G++   + ++ + + DG + L+G K F S+  
Sbjct: 117 SG-------------RAIGCFALTEPQAGSEAHNLRTRAELV-DGQWVLNGSKQFCSNAK 162

Query: 240 SDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                I+ A  +  +G   +   L      G   +R ++K+G R++ T  +  S+     
Sbjct: 163 RAKLAIVFAVTDPDLGKKGLSAFLVPTDTAGFAVERSEHKMGIRASDTCAVSLSDCRIPQ 222

Query: 299 LGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G    +  L    +     ++   R +   A+ YAR R   G  + +   +
Sbjct: 223 ANLLGERGKGLAIALSNLEGGRIGIGAQALGIARAAFEAALLYARERVQFGKPIAEHQSI 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+   + AA  L    A           E       A   K +  +MA  V ++A
Sbjct: 283 ANMLADMQTQLNAARLLILHAARLKSAGLPCLSE-------ASQAKLFASEMAEKVCSQA 335

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG GY+E+  + R+YR++    I  GS     L +   L  
Sbjct: 336 VQIHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELAN 380


>gi|12859751|dbj|BAB31764.1| unnamed protein product [Mus musculus]
          Length = 451

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 58  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 116 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 163 SDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISCIVVEKGT 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 221 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 281 LGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 336

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +   A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 337 --QEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 394

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 395 GSNEVMRMLISRNLLQ 410


>gi|291239181|ref|XP_002739489.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight
           chain-like [Saccoglossus kowalevskii]
          Length = 428

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 137/409 (33%), Gaps = 43/409 (10%)

Query: 69  TAQELAR-MA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             Q+LAR  A     P+   Y   GE        P    +++++   GL  +   + +  
Sbjct: 51  EYQQLARKFAREEMIPKAAEYDRTGE-------FPV--DVIKKAWELGLMNTHIPQEYGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                    M  +    + V +       K +  ++        
Sbjct: 102 PGFGIFDACLVTEELAYGCTGIEVAMEANNLGQTPVIIAGNDEQKKKYLGRMV------- 154

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +L
Sbjct: 155 ------EEPLMCAYAVTEPGAGSDVAGIRTRAEKKGDHYVINGQKMWITNGGKANWYFVL 208

Query: 247 AQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    R         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 209 ARTDPDLKRPASGAFTGFIVDRDTPGVTPGRKELNMGQRCSDTRGITFEDV---VVPKEN 265

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +V   + +L EA  YA  R   G ++     +  
Sbjct: 266 VLLGDGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYALERKTMGKVIAQHQAVAF 325

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ I  A   +++     D+    +         A I K W   +A     +A++
Sbjct: 326 ILAEMAIGIETARLATYKCCWEHDQGHRNT-------YYASIAKAWAADVANKCATDAVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             GG+GY  E  + +  R++    I  G+     + +         L E
Sbjct: 379 IFGGNGYNSEYPVEKLMRDAKIFQIYEGTAQIQRMIIAREWINKVKLGE 427


>gi|83644527|ref|YP_432962.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83632570|gb|ABC28537.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 599

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 80/486 (16%), Positives = 167/486 (34%), Gaps = 54/486 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSIW 120
            ++    QE  + A      L+A     G  W D V   P  +    ++ +  G      
Sbjct: 36  DMVKAILQEGGKFAENILAPLNAVGDTEGCSWNDGVVTTPKGFKEAYQQYVEGGWPAMSQ 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              ++      +     +  +  A          S      +    +    + + P + +
Sbjct: 96  PLEYDGQGLPYSLSSILSEWFSGANHAWAMYPGLSQGCIETILAHGSDSQKQRFLPHLIA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   G+D+  + ++ + + DG Y ++G K F+S+   
Sbjct: 156 GRWTGT-------------MCLTEPHCGSDLGLLKTKAEPLPDGAYAITGTKIFISAGDH 202

Query: 241 D-----AFIMLAQ-VEGRVGCFLVPRLLEDG----------SPNGLCYQRLKNKIGNRSN 284
           D       ++LA+  +   G   +   +             +PN L    L++K+G + +
Sbjct: 203 DLSDNIVHVVLARLPDAPAGTKGISLFIVPKFNVSDGGEITTPNSLSCGSLEHKMGIKGS 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G+ N     +        +   +  ++    +   AI YAR R  
Sbjct: 263 ATCVMNFDGARGYLIGEPNRGLNCMFTFMNAARVGVGLEGLAATEAAFQGAISYARDRLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +           AL+       D      +A  +
Sbjct: 323 MRSLKGPVNKDKPADPIIVHPDVRRMLLTQKAIREGGRALAMYCTQQIDLTLYSEDADVK 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +   A   ++ PI K +  + A    +  M+  GG G+I+E  + +  R++   ++  G+
Sbjct: 383 AAAEAKLALLTPIVKAFLTETAQECASYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGT 442

Query: 447 GNAMVLDVLNLLEKG--TNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLAR 502
                +D+L     G    L  Q  +      +  +  ++        +    E   LA+
Sbjct: 443 TGIQAIDLLARKIIGSQGELLRQFVNEARAYCEGQNEARRFSAWTDALLQHLDEWLQLAQ 502

Query: 503 FLTEKI 508
            + EK 
Sbjct: 503 GVAEKA 508


>gi|212639075|ref|YP_002315595.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
 gi|212560555|gb|ACJ33610.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1]
          Length = 403

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 128/382 (33%), Gaps = 36/382 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + WD+  +      +L+R     L        +  +                        
Sbjct: 36  KEWDERGYFD--PNILKRLAELNLMGVCIPEQYGGMGMDYNSLAIVCEELERGDTAFRTA 93

Query: 152 MSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +S  +   S+  L   T    + +               P  K       GLTE   G+D
Sbjct: 94  VSVHIGLNSLTLLQWGTEEQKQKYL-------------VPQAKGEKIGAFGLTEPNAGSD 140

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +AAI++   +  D         W     ++D FI+ A  +       +   + + +  G 
Sbjct: 141 VAAISTTAVRDGDDYILNGQKTWISLCDIADHFIVFAYTDKSKKHRGISAFIVERTMPGF 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMR 329
             + +K K+G R+  T EL F N         N+     E  KI +  LD+   +V+   
Sbjct: 201 SSRAIKGKLGIRAGNTGELFFDNVRVP---KENLLGEEGEGFKIAMSALDNGRFTVAAGA 257

Query: 330 VSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             L  A       Y   R   G  +    ++++ IA++   +  +  L ++     ++ +
Sbjct: 258 CGLIMACLEASVKYCHERQTFGKEIGRHQLVQQMIANMEAGLQMSRLLVYKAGFLKNKGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E + A+ MA       C  A     +A++  G  GY  E  + R+ R S A  I  
Sbjct: 318 RNTRETSLAKWMA-------CDFANKAADDAVQIHGAYGYSNEYPVERYLRNSKAPVIYE 370

Query: 445 GSGNA----MVLDVLNLLEKGT 462
           G+           VL   +   
Sbjct: 371 GTREIHTIMQAEYVLGYRQDKP 392


>gi|89895238|ref|YP_518725.1| hypothetical protein DSY2492 [Desulfitobacterium hafniense Y51]
 gi|89334686|dbj|BAE84281.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 587

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 84/468 (17%), Positives = 166/468 (35%), Gaps = 62/468 (13%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ------AHKIRAARLYLMAQLEAGHLMSPSVT 157
             L++ +   GL+       ++ +   +      A  I     + M Q     + S    
Sbjct: 64  KQLIQEAGELGLNGLDIPEEYDGLDLDKISTTIVAECIGKGGSFAMTQGGHTGIGSM--- 120

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               + +  T    K + P I S E              A    LTE   G+D  +  ++
Sbjct: 121 ---PIVMFGTHEQKKKYLPGIVSGE-------------KAGAYALTEPGAGSDAMSAKTR 164

Query: 218 GQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                DG  Y L+G K F+++   +D FI+ A++ G          + D    GL     
Sbjct: 165 ADLSPDGKYYLLNGTKQFITNSAFADLFIVYAKIAGDKY----TAFIVDADSEGLSLGPE 220

Query: 276 KNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G + ++T ++   N    +     ++        ++  L     A  ++   + +L
Sbjct: 221 EKKMGIKGSSTRQVILDNVKVPVENILFEIGRGHIVAFNILNLGRYKLAANALGASKHAL 280

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------EAK 384
             A  YA  R   G  + +  ++K  +A +A+      ++ +R     D          +
Sbjct: 281 ELAAAYANERKQFGTPIANFGLIKEKLAKMAIKTYVMESMLYRTGGLLDGILHGLDTSGE 340

Query: 385 SRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  + AA           + K +  +    V+ E ++  GG GY  E SI R YR++   
Sbjct: 341 NGGQVAAKGIEEYALECSMNKIFATEAQGYVVDEGVQIHGGYGYCSEYSIERLYRDARIY 400

Query: 441 SILLGSGNAMV----LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
            I  G+         + +L   +KG    ++    L++ + + G              +E
Sbjct: 401 RIFEGTNEINRTIIPITLLRRADKGDLPLQEAVQKLKEYIAAGG------------AARE 448

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           D+       + + L + AA L + G N   +  +  +  D       M
Sbjct: 449 DEAGLIQAAKDMFLLTMAAGLQKYGKNLQKEQEIVGKLADLAIQAFAM 496


>gi|72383895|ref|YP_293249.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72123238|gb|AAZ65392.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 598

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 86/500 (17%), Positives = 184/500 (36%), Gaps = 57/500 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    ++    G                 A       ++  A +        S 
Sbjct: 80  VTTPDGFKNAYKQFSEAGWTALACQAEHGGQGLPNAVNAAVMEIFAGANMAWAAYPGMSQ 139

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            + + +A   +      + PK+ S E+  T             + LTE   GTD+  + +
Sbjct: 140 AAYTCLAANGSEAQRALYLPKLASGEWAGT-------------MCLTEPHCGTDLGLLRT 186

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +    +DG + ++G K F+S    D       ++LA++         +  FLVP+ L   
Sbjct: 187 RAVPNADGTFGITGTKIFISGGEHDFTDNIVHLVLARLPDSPPGVRGISLFLVPKFLVSP 246

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                  N +    L++K+G  +NAT  + F    G+L+G+ +     +  M     L  
Sbjct: 247 EGDLAERNAVTCGSLEHKMGIHANATCTMNFDGATGYLVGEPDKGLAAMFVMMNHARLLV 306

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAA 369
            + ++  M  +  +A+ YA+ R                 +I+   ++R +      I   
Sbjct: 307 GVNAIGLMEAAYQKALGYAKDRTQGRSPTASARNSPADPIIEHADVRRMLLTQKAYIEGT 366

Query: 370 TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A +       D      +++ R   A  + ++ PI K +   +A    + AM+ +GG G
Sbjct: 367 RAFAQWACQLADTQHFGNDSEIRHHAAELSALVTPIVKAFSSDLAVECTSLAMQVLGGHG 426

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK 481
           YI +  + +H R++    +  G+     +D+L   +L       E   + + + +G++  
Sbjct: 427 YIVDNQVEQHLRDARIIPLYEGANGIQAMDLLGRKVLPDQGTRLEMFLAIVNEFIGANAG 486

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
               +LR+  +       + R  T ++++ + A       +  +A  +L  R   +    
Sbjct: 487 N--PVLREFTAPLSSATDVLRNATHEVSMQAKADP---HVLGSVAASYL--RLAGHVGLA 539

Query: 542 HCMLHGRFNAAHIIDSLYLD 561
              +  R  A  ++++   D
Sbjct: 540 W--MWARMAAIGLVNAASAD 557


>gi|329897441|ref|ZP_08272096.1| Branched-chain acyl-CoA dehydrogenase [gamma proteobacterium
           IMCC3088]
 gi|328921201|gb|EGG28603.1| Branched-chain acyl-CoA dehydrogenase [gamma proteobacterium
           IMCC3088]
          Length = 386

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 136/405 (33%), Gaps = 36/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            YV S  A   A MA           P   RWD     P    +LR +   G        
Sbjct: 11  AYVDSARAFAQAEMA-----------PHAARWDAESIFPV--DVLRLAGEMGFMGMYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           S   +   +                    ++    + SM+     P + + W P++    
Sbjct: 58  SAGGLGMSRLDASLIVEELARGCTTTAAFLTIHNMATSMIGKYANPEIIEQWCPELVMG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       +      LTE   G+D A++ S   +  D  Y ++G K F+S   S  
Sbjct: 117 ------------TKLASYCLTEPGAGSDAASLRSSAVRDGDH-YVVNGAKVFISGAGSTD 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
            ++     G  G   V   L      G+ Y + + K+G  +  T  + F N    +   L
Sbjct: 164 VLVAMLRTGDAGAKGVSAFLIPADAEGISYGKKEEKMGWNAQPTRMISFDNVRVPVANRL 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G          +      ++ A  SV   + +L EA  Y + R      + +    +  +
Sbjct: 224 GKEGQGFAIAMEGLDGGRINIATCSVGTAQQALVEATAYVQERQQFNQSIAEFQATQFRL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  ++ AA  +    A   D    +      A     + K +       V  +A++  
Sbjct: 284 ADLQTELVAARTMVRLAAFKLDANDPQ------ATTYCAMAKRFATDAGFDVCNQALQLF 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           GG GYI E  + R  R++  + IL G+   M + +   +     L
Sbjct: 338 GGYGYIREYPMERFVRDTRVHQILEGTNEVMRVIIARRMLMEGAL 382


>gi|295695878|ref|YP_003589116.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411480|gb|ADG05972.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 383

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 122/360 (33%), Gaps = 24/360 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            L++++   GL        +  +      K                L+       S+ + 
Sbjct: 40  ELVQQAKQLGLFGLSIPEEYGGLGLNMTEKCAILEELGKTHNGFTSLIGAHTGIGSVGII 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +      + + P              M          L+E   G++ A + +   +  D
Sbjct: 100 ELGNEEQRRRFLP-------------AMAAGDKIGAFALSEPEAGSNAANLRTVAVRKGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  + P +D   ++A  +   G   +   L +    G        K+G R 
Sbjct: 147 RYILNGMKHFITNGPEADVVTVMAVTDPSKGIRGITSFLVEADFAGFRKGPADRKMGLRG 206

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + T +L F +    +   L     G V  +KIL           +      LA +  +A 
Sbjct: 207 SHTCQLFFEDCEVPVENRLGEEGEGYVNALKILTNGRASLGARCLGSCEKLLALSTEHAL 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +I+   +   +AD+A+++    +L +R+    D  +   +E+A       I 
Sbjct: 267 QRVQFGKPIIENQAVAHMLADMAVEVETLKSLLYRVTAMVDRGEKTIKESA-------IV 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  +    +   A++  GG GY+ E  + R YR++    I  G+       +   L++
Sbjct: 320 KLYASEAYNRIADRAVQIFGGMGYMRELPVERFYRDARITRIYEGTSEIQRNIIAAQLKR 379


>gi|307727569|ref|YP_003910782.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307588094|gb|ADN61491.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 377

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 138/396 (34%), Gaps = 35/396 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A  +        P   +WD+    P    ++++    G    I    +    
Sbjct: 7   EEQRMIRDAARDFAT-ERLAPNAAQWDRDAHLPE--DVVKQMGELGFLGMIVPPQWGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTN 187
                   A             LMS   +     +    +      +   + S       
Sbjct: 64  TDYVAYALALEEIAAGCAACATLMSVHNSVGCGPILNFGSDAQKDRYLQDLASG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
                         LTE + G++   + ++   + DG + L+G+K F+++   +D  I+ 
Sbjct: 118 -------RRIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILNGNKQFVTNGARADIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    R ++K+G R++ T  +   +         N+  
Sbjct: 170 AVTDPDRGKRGISAFIVPTDTPGFNVGRPEHKLGIRASDTCPVSLDDCTVPA---ANLLG 226

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P E ++I L  L+   + ++   V +       A  YA  R   G  L D   +   +A
Sbjct: 227 EPGEGLRIALSNLEGGRIGIAAQAVGIARAAFDAARAYASERTQFGKALKDHQTIANMLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L    A      +    E       A   K +  + A  V + A++  G
Sbjct: 287 DMATRLNAARLLVHHAARLRSAGEPCLSE-------ASQAKLFASETAEQVCSNAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 340 GYGYLEDYAVERHYRDARITQIYEGTSEVQRIVIAR 375


>gi|149378464|ref|ZP_01896153.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357255|gb|EDM45788.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 386

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 22/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P  H + ++  + GL        +  +    ++ + AA     A
Sbjct: 20  KEINPHCDEWEEAGEFP-IHDIFKKLGNLGLLGIQKPEEYGGMGLDYSYNLVAAEELGTA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L     T     A+            +  S E   T  AP     +   +G++E
Sbjct: 79  HCGGVPLAIGVQTDMCTPAI-----------SRFGSDELKRTFLAPAIAGDMVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A + +  ++  D         W  +SP +D   +LA             ++  
Sbjct: 128 VAAGSDVAGMKTTAKQDGDDYVINGSKMWITNSPRADFICLLANTSDDKPHKNKSLIVVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            +  G+ +    NK+G RS+ T ++ F +        +    TG +  M       +  A
Sbjct: 188 MNTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIGAEGTGFMMQMLQFQEERMWGA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  + + +++ I Y R R   G  LI+  V+   +A++  ++ A  AL+++      
Sbjct: 248 ANVIKALELCISKTIEYCRERKTFGQPLINNQVIHFRLAELQTEVEALRALTYQACELHV 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K  ++       +A + K    ++   V    ++  GG+GY+ E  ++R +R+    S
Sbjct: 308 EGKDVTK-------LASMAKLKAGRLGREVTDSCLQYWGGNGYMWENPLSRAFRDVRLVS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +  ++
Sbjct: 361 IGGGADEIMLGIICKMM 377


>gi|126739316|ref|ZP_01755009.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719416|gb|EBA16125.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 381

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+     P    L  R    G                +           M+    
Sbjct: 26  PFARQWEADGTIP--KELWPRIGELGFGGLYVSEETGGSALSRLDATLVFEALSMSCPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P++ S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDTFASDEMKSRIMPEVLS-------------LNTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ +K ++G Y L+G+K F+S    SDA++ + +  G  G   +  +  +   
Sbjct: 131 SDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRT-GEDGPKGISTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G +S  T +++F +       L+G+                L+ A  S
Sbjct: 189 PGLSFGGQEIKMGWKSQPTSQVQFDDCKIPANNLVGEEGKGFRYAMMGLDGGRLNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D+  
Sbjct: 249 LGAAQAGLDMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQAAWKLDKGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    ++ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   L
Sbjct: 363 GTNEIMRVIVARHL 376


>gi|320589507|gb|EFX01968.1| isovaleryl-dehydrogenase [Grosmannia clavigera kw1407]
          Length = 834

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 84/468 (17%), Positives = 159/468 (33%), Gaps = 59/468 (12%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV----HKELELLGEY 64
           R   + +H P   LF   + P                L +  P         +L+ L E 
Sbjct: 14  RPLFHSLHHPLHPLFISARTPPHH-----------RTLASKHPKGFVPPPQADLDELRER 62

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           V   T +EL                     DK    PA   + ++    G      D   
Sbjct: 63  VQEFTRRELTEEV-------------AAATDKTNSFPA--DMWQKLGSAGFLGITADEDV 107

Query: 125 EPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +    QAH +    L   +   A    + S    + + L  T        P + +   
Sbjct: 108 GGLGLGYQAHCVVMEELSRASGSVALSYAAHSQLCVNQLQLHGTAAQKAAHMPGLIAG-- 165

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPM 239
                      +    L ++E   G+D+ ++ +  ++      +G        W  + P 
Sbjct: 166 -----------TTIGALAMSETGAGSDVVSMRTTAREAVQHGRNGYVLRGSKMWITNGPD 214

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +   ++ A+     G   +   L D +  P G    R  +K+G R + T EL F + F  
Sbjct: 215 AGLIVVYAKTRPDAGSKGITAFLVDTAARPPGFACARKLDKMGMRGSNTGELVFDDVFVP 274

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG ++     +     L  L  +   +  M+ +L  A+ Y  +RH  G  +    +
Sbjct: 275 CSHVLGTVDGGARVLMAGLDLERLVLSAGPLGLMQAALDLALPYTHQRHQFGVPVASFQL 334

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+   + A+ A ++  A   D++     E          T  +  + A  V  +
Sbjct: 335 VQGRLADMHTKLQASRAYTYATARRVDDSSDIRTED------CAGTILYAAERATEVALD 388

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            ++ +GG GY+EE   +R  R++    I  G+     + +     K  
Sbjct: 389 CIQLLGGMGYMEEMPASRILRDAKLYEIGAGTSEIRRMVIGRAFNKQP 436


>gi|114589059|ref|XP_001139669.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 644

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 108 RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 165

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 166 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 212

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 213 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 271

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 272 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPV---ENILGEVGDGFKVAMNILNSGRF 328

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 329 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 388

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY  +    R  R++ 
Sbjct: 389 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTR 443

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    V   LRDS+    +
Sbjct: 444 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVD 503

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 504 LGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINL 563

Query: 542 HCM 544
           + M
Sbjct: 564 YGM 566


>gi|188991130|ref|YP_001903140.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732890|emb|CAP51084.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 597

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 83/505 (16%), Positives = 172/505 (34%), Gaps = 61/505 (12%)

Query: 53  VVHKELELLG-----EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK----VEFHPA 102
                   LG       ++    +E  R        L++     G  +DK    V   P 
Sbjct: 20  GAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIGDEIGCAFDKSTHAVTTPPG 79

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           + A   + +  G +    +  F          +  + +   A L  G+    S  +   +
Sbjct: 80  FRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEAL 139

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + +   +    +  T             + LTE   GTD+  + ++ +  +
Sbjct: 140 RQHGEAWQQEVFLKPLIDGRWTGT-------------MCLTEPHCGTDLGLLKTRAEPNA 186

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y ++G K F+++   D       ++LA++         +  F+ P+   D     G 
Sbjct: 187 DGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPPGAKGISLFVTPKFKVDRDGTVGE 246

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N L    +++K+G + + T  + F    G+L+G  +     +  M     L   +  + 
Sbjct: 247 RNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSVGLQGIG 306

Query: 327 GMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF 374
               +   A+ Y R R  S               +I  P ++R +  I      +  L+ 
Sbjct: 307 LSERAYQNALRYTRERLQSRALSGAKFPDKPADPIIVHPDVRRMLLTIKALTEGSRLLAL 366

Query: 375 RLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A+  D A        R++       + PI+K    + +      A++C GG GYI E 
Sbjct: 367 HAASLVDVAHRGGSEQERADAETLVSFLTPISKACQTEWSVENTYHALQCFGGHGYIREY 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLG--SSGKKVI 484
            + +  R++   +I  G+     LD++      +     +   + +E      +    + 
Sbjct: 427 GMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHADNAALA 486

Query: 485 TILRDSISLCKEDKGLARFLTEKIA 509
             ++       E   L R + ++ A
Sbjct: 487 EFIKPLRDKASEWAMLTRDVLDRAA 511


>gi|299472599|emb|CBN78251.1| acyl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 412

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 135/382 (35%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK    P     + +    GL                     A           
Sbjct: 56  PNAGEWDKNHAFP--KDQVAQLGELGLMGVAISEEDGGTGLDYLAYAIAMEEISRGCAST 113

Query: 149 GHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS  +    + +    +P    +      S              +      L+E   
Sbjct: 114 GVIMSVNNSLYCAPIEKFGSPEQKDEHLKPFASG-------------ASLGCFALSEPGN 160

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  +   D         W  ++  + + I+ A  +       +   +     
Sbjct: 161 GSDAGAARTTARLEGDQWVLDGTKAWITNAHDAQSSIVFATTDSSKKHKGISAFIVPLET 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G+   + ++K+G R+++T  L             N+        KI +  LD+  + ++
Sbjct: 221 PGMSLGKKEDKLGIRASSTANLIMEGCRVP---KANLLGEEGMGFKIAMGTLDAGRIGIA 277

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A      A+ Y+  R   G  +     ++  I+++++ + AA  L+++ A + D
Sbjct: 278 GQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQSKISEMSMKLDAARLLTWKAAAARD 337

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++ ++EAA A++ A  T  +C   A       ++ +GG GY+ E    RHYR++    
Sbjct: 338 AGENYTKEAAMAKLFASETATFCSHAA-------IQVLGGMGYVSEMPAERHYRDARITE 390

Query: 442 ILLGSGNAMVLDVLNLLEKGTN 463
           I  G+     + +   + K  N
Sbjct: 391 IYEGTSEIQHMVIAGSVVKEYN 412


>gi|260203941|ref|ZP_05771432.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
 gi|289573370|ref|ZP_06453597.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
 gi|289537801|gb|EFD42379.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85]
          Length = 390

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 146/383 (38%), Gaps = 32/383 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+              ++   +R      +A
Sbjct: 21  KRLAPHALEWDAAKHFPV--DVLREAAELGMAAIYCRDDVGGSGLRRLDGVRIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T    KDW P++ +               V     LTE
Sbjct: 79  DPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM-------------GVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
              G+D  A++++  +      G Y L G K F+S   + D ++++A+  G  G   V  
Sbjct: 126 PGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAEGPRGVSA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G  +  T ++            L  + G      I +    
Sbjct: 185 FIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPSEAMLGGADGEGAGFGIAMSGLN 244

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +
Sbjct: 245 GGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLW 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  
Sbjct: 305 RAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIV 358

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           R+   + IL G+   M L +   
Sbjct: 359 RDLRVHRILEGTNEIMRLVIGRA 381


>gi|163842298|ref|YP_001626702.1| isovaleryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|163673021|gb|ABY37132.1| isovaleryl-CoA dehydrogenase [Brucella suis ATCC 23445]
          Length = 392

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 135/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  ++    +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLPGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAEKATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|307546535|ref|YP_003899014.1| acyl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307218559|emb|CBV43829.1| probable acyl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 595

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 95/529 (17%), Positives = 192/529 (36%), Gaps = 68/529 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVE 98
           +L  L          + E     +++   +E  + A+     L+      G R +  +V 
Sbjct: 14  ILGELAGLDAVAALPDCEEASSDLVNAILEEAGKFASGVLAPLNRRGDQEGCRLEGERVV 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               W A   +    G        +F      +        ++  + +    L   +V  
Sbjct: 74  LPQGWQAAYDQFREAGWLGLSLPEAFGGQGLPKLVSTPVWEMWFSSNMAFTMLPQLNVAQ 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    +      W  KI S E+                + LTE + G+D+AA   + 
Sbjct: 134 AEALLFAASEAQKATWLEKIVSGEW-------------TATMNLTEPQAGSDLAATRMRA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL----- 262
           +    G Y L G K ++S    +       ++LA++         +  FLVP+ L     
Sbjct: 181 EPDESGNYRLHGQKIYISYGEHELTPNILHLVLARLPDAPEGVKGLSLFLVPKYLLDERG 240

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           E G  N +    +++K+G   + T  L +       G L+G+ +     +  M       
Sbjct: 241 EPGEKNDVRCISIEHKMGIHGSPTCTLSYGDHDGAIGQLIGEPHTGLKTMFIMMNEARFG 300

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATA 371
             +  ++    +   A+ +AR R           G  ++  P +KR +  +   + A   
Sbjct: 301 VGVQGLALGERAYQAALDHARERVQGRNVVSGEMGLPILHHPDVKRMLVGMRARLLAMRT 360

Query: 372 LSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             +       LA    +A+   +   +  ++ P+ K WC ++  A+  EA++  GG G++
Sbjct: 361 FLYTAAGWFDLARHHPDAEVADKHRRHVDLLMPVAKGWCSELGNALCDEAIQVFGGMGFV 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
           EE  +A+ +R++   +I  G+      D+L                +  D G++ ++++ 
Sbjct: 421 EETGVAQLFRDARIITIYEGTTGIQANDLLG-------------RKILHDNGATLRELLD 467

Query: 486 ILRDSISLCKEDKGLARFLTEKI-----ALASSAAALYRAGMNDIADVF 529
            +R       ED  L   L E +      LA++   L   G    A+++
Sbjct: 468 DIRTCARSVGEDARLGD-LAESLNELVYGLAATTDWLLAQGEEQTAELY 515


>gi|237785180|ref|YP_002905885.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758092|gb|ACR17342.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 391

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 139/364 (38%), Gaps = 21/364 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +++   GL     D  F         +  A     +AQ         S   + +V+
Sbjct: 44  RDMYKKAGELGLLGITADEKFGGGGMDD-WRFNAILSEELAQ---------SDCGSVIVS 93

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           + T   +   +  +  + E       P+        + +TE   G D+A I +  +K +D
Sbjct: 94  VQTINDLVVPYLERFANDEQKERFLRPLCAGEKIAAIAMTEPGAGADLAGIRTLAKKDAD 153

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y ++G K F+S+ + +D  I++A  +   G   V  L+ +    G        K+G +
Sbjct: 154 GNYIVNGAKTFISNGVQADFTIIVAVTDPEKGRAGVSLLIVEDGMEGYTKTGPLKKVGLK 213

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F N       LLG+     G +        L  A+ SV+  R +      ++
Sbjct: 214 AQDTAELSFENVTVPAENLLGEEGAGFGYLRHNLAQERLSIAVGSVATSRRAFDLVYQHS 273

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L+D       +A++A  I AA +       +  + +     AA A+     
Sbjct: 274 QDRKTFGKRLVDHQAYGWMLAEMATKIQAAQSFVDACIEAKVKGELDETTAAMAKW---- 329

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              W   +   V+  A++  GG G++ E  IA HY ++    I  G    M   +   L 
Sbjct: 330 ---WTTDLQVEVVNNALQMHGGYGFMMEYPIATHYLDTRVQPIYGGPNEIMKEIIARRLA 386

Query: 460 KGTN 463
           KG  
Sbjct: 387 KGAG 390


>gi|33603557|ref|NP_891117.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577682|emb|CAE34947.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score =  259 bits (663), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 131/362 (36%), Gaps = 25/362 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++     GL        +  +      ++R    L   +        +     +  + 
Sbjct: 39  EIVQEMRDLGLFGLSIAADYGGLGLTMEEEVRVVFELGQTSPAFRSLAGTNIGIGSQSIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E             +     LTE   G+D  A+ +   +  D
Sbjct: 99  LAGTDDQRQRYLPKLASGE-------------LIGSFALTEPDAGSDAMALRTSAVRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+         +   L +    G+   +   K+G   
Sbjct: 146 HYVLNGTKRFITNAPVAGLFSVMARTAPERRADSISCFLVEAGTPGVTLGKPDKKMGQAG 205

Query: 284 NATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N        L     TG    M++L    L  A + V      + +A+ YA
Sbjct: 206 ALTCDVVFDNCRVPAEALLGGKEGTGFRTSMRVLDKGRLHIAALCVGIAERLVRDAVRYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD   ++ AA ++    A   D  ++ + EAA        
Sbjct: 266 LERKQFGQPIAEFQLVQAMIADSQTELYAARSMVLDAARKRDLGQNVTMEAA-------C 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +K +  +M   V   A++  GG+GYI E ++ R YR+     I  G+     L +     
Sbjct: 319 SKLYATEMVGRVADRAVQIHGGAGYISEYAVERFYRDVRLFRIFEGTSQIQQLVIARETL 378

Query: 460 KG 461
           K 
Sbjct: 379 KA 380


>gi|329895299|ref|ZP_08270941.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328922421|gb|EGG29764.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 589

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 100/557 (17%), Positives = 190/557 (34%), Gaps = 53/557 (9%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGE 92
            +  D +L  L     ++   E + +G  +      E A++AN         G   P   
Sbjct: 12  QFVIDEVLN-LENRLGALPVYEDKGVGSDLTLAVLDEAAKLANDVIAPTRRIGDLEPARC 70

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             ++V   P     LR+    G         F      + +    + ++  A +      
Sbjct: 71  ENNRVLCSPGHEEALRQLGESGWTGIAASEDFGGQGLPEVYGTATSEMWNGANMAFALAP 130

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  +A  +    T      +A KI S E+  T             + LTE   G+D+ 
Sbjct: 131 FLSSGAALAITAHGTQEQKALYATKINSGEWSGT-------------MNLTESGAGSDLG 177

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            + ++     D  Y + G K +++    +       ++LA++         +  F+VP+ 
Sbjct: 178 PLKTRAVPEGDH-YRIYGQKIYITWGDHEATDNIVHLVLARLPDAPEGSKGISLFIVPKY 236

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313
           L +     G+ N +    +++K+G  ++ T  + + +     G+L+G  N     +  M 
Sbjct: 237 LVNEDGSLGARNDVYPVSVEHKLGIHASPTCVMAYGDTEGAIGYLVGRENEGLRCMFTMM 296

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L   +  +     +   A  YAR R   G  +I+ P +KR +  +     A  AL+
Sbjct: 297 NEARLKVGLQGLGAAEGAFQLAKAYARERVQGGVAIIEHPDVKRMLLTMRSGCEAMRALA 356

Query: 374 FRLANSFDEAKSRSE-----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  A + D A S  E       A   +M P+ K W       + +  ++  GG GY+EE 
Sbjct: 357 YSEAVTMDLAHSGPESEKALAQARIDLMIPVIKGWLTTFGEEITSLGVQVHGGMGYVEET 416

Query: 429 SIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
             A+++R+    SI  G+       L    L   G    E + + + + +         +
Sbjct: 417 GAAQYFRDVRITSIYEGTNGIQAADLVNRKLGRDGGATMELVQTEIAETVADLMASDNDV 476

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF----LENRFLDNCHSTH 542
           L+      K         TE +        L       +   F    +            
Sbjct: 477 LKGMGQALKVALAAQVRATEWL---LQ--QLRSNKPAALGGSFEYMMMTGYLFGGWQLVR 531

Query: 543 CMLHGRFNAAHIIDSLY 559
             L  +   A   D  +
Sbjct: 532 GALVAQRAIAGGSDREF 548


>gi|295695774|ref|YP_003589012.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411376|gb|ADG05868.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 539

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 118/512 (23%), Positives = 213/512 (41%), Gaps = 51/512 (9%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G+N +  D  L  +++++ PS      ELE  G    +   + +  + +   P    +  
Sbjct: 9   GLNHWLEDRDLQVILSHYWPSWKEYAPELESFGALAGTDVYEAIYHIDHDAPPVFVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    LL+      ++   ++                A  YL+A     
Sbjct: 69  DGRRVDRVRLSPVETRLLKEIAP--MNRVPYEG--------GGWHHHYALGYLLADPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +  +A  +        H +W  K+ + E                   +TE +GG+
Sbjct: 119 CVITITGQTAYAIHKYA--PAHAEWKEKLLAGEMFG-------------ATWMTENQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A T+  +     ++ L+G K+F S   ++D  I+ A+ EG       +  FLVPRL 
Sbjct: 164 DLGANTTVARPDG-EVWRLTGDKYFASGAGLTDVAIVTARPEGAPAGPKGLALFLVPRLN 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N    +RLK+K   R+  + E+E  N+  +L+G          +   +  L +A+
Sbjct: 223 RAGELN-YRVRRLKDKSATRAVPSGEVELENSEAYLVGRAEQGIYYTLENLTVSRLANAV 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----N 378
             +   + +  E +   RRRH  G  L D P+++R + D+A+ +   T L F        
Sbjct: 282 AGMGIAKKAHLEVMERVRRRHSFGRALQDHPLVRRDLVDMAVRLVGGTVLGFHAVEAFQR 341

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++ E    S    YAR ++ + K      A  +   AME  GG G++EE ++AR +RE+ 
Sbjct: 342 AWHERPPYSPAYHYARFLSHLAKNRTADHAAEITRLAMELFGGLGFLEEYAVARWHREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--------DLGSSGKKVITILRDS 490
              I  G  N   LD+L  ++K  N  E   +            + G + + +  +  D+
Sbjct: 402 ITPIWEGPSNIQALDLLETVQK-KNAHEGFLAEFIPILEKVGTVEAGWARETIEKVFTDA 460

Query: 491 ISL-CKEDKGLARFLTEKIALASSAAALYRAG 521
             L  +E +  A+    ++A A+  A LYR  
Sbjct: 461 AGLNPEELQWYAKHWVVQMADAAQVALLYRLA 492


>gi|261755272|ref|ZP_05998981.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261745025|gb|EEY32951.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
          Length = 338

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 130/355 (36%), Gaps = 23/355 (6%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R +   G+              K+   +        A       +S    +A M+    
Sbjct: 1   MRETGPLGMGGIYVRDDVGGSGLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFG 60

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                + + P++ S E+                  LTE   G+D AA+ ++  +  D  Y
Sbjct: 61  NEEQRQRFLPQLTSMEW-------------LASYCLTEPGSGSDAAALKTRAVRDGDH-Y 106

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            ++G K F+S   S    +     G  G   +  L+      GL +   + K+G  +  T
Sbjct: 107 IVNGAKQFISGAGSTDLYVTMVRTGEDGPKGISTLVVPKDAPGLSFGANEYKMGWNAQPT 166

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             + F N    +   LGD  V             L+ A  S+ G + + A+A+ Y     
Sbjct: 167 RTVIFDNCRVPVENRLGDEGVGFKIAMAGLDGGRLNIAACSLGGAQAATAKALEYCAEHK 226

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     ++  +AD+  ++AA+  L +  A+  D           A   + + K +
Sbjct: 227 AFGQTIDRFQALQFRLADMETELAASRMLLYTAASKLDRKTHD------AGKWSAMAKRF 280

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  V  EA++ +GG GY+ +  I +  R+   + IL G+   M + +   +
Sbjct: 281 VTDTSFNVANEALQLLGGYGYLHDYGIEKLVRDLRVHQILEGTNEIMRVIIARHM 335


>gi|292656835|ref|YP_003536732.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370945|gb|ADE03172.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 381

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 132/403 (32%), Gaps = 32/403 (7%)

Query: 63  EYVLSCTA----QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           E V S T     Q   R   +         P     D+ E  P    +        L   
Sbjct: 2   ETVGSATGLTDEQRAIRDVVHEFAV-EEIRPTAREADETEAFPE--DVWDGLADLDLTGL 58

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
                +      +A            QL     +S    +   +A   T +  + W P++
Sbjct: 59  TVPEEYGGFGADRATYAVVNEEVAYGQLAVATALSVHCLATECIAEFATDQQKETWLPEM 118

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                         +       GL+E   G++ A +++  ++  D        +W  +  
Sbjct: 119 V-------------RGRPVGMFGLSEPDAGSNPAEMSTVARREGDEYVINGKKQWITNGQ 165

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                I+ A+ +      +   L+ +    G    + + K+G R++ T  L F +     
Sbjct: 166 RGGVCILFAKTDPDDPSSVTQFLVPE--SAGYEVGKKEEKLGLRASDTTALLFDDVRIPA 223

Query: 299 LGDL-NVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G     +IL    +  A  +V   + +L +AI YA  R      +     +
Sbjct: 224 ENRLTEEGKGLSAAFRILTGGRIGIASQAVGLAQAALDDAIDYANEREQFDKPISKIQAV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+   + A+  L    A   D               A I KY+  + A  V  EA
Sbjct: 284 RHKIADMGTQVHASRMLVREAARVADAGDDPRTA-------ASIAKYFASEAAVDVTNEA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY  +  + R+YR+S   +I  G+       +   L
Sbjct: 337 VQVHGGYGYTTDFDVERYYRDSKITTIYEGTSEIQKEIIARSL 379


>gi|167534479|ref|XP_001748915.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772595|gb|EDQ86245.1| predicted protein [Monosiga brevicollis MX1]
          Length = 411

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 137/399 (34%), Gaps = 28/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L+    E  ++A     +     P     D+   +P    L++++   GL       +
Sbjct: 33  FDLTEEQAEFQQLARKFAREEVL--PQAPELDRTGEYP--WELIKQAHGLGLLNLHIPEA 88

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +  +                A       M  +  +   V L       K +  ++     
Sbjct: 89  YGGMGLHSLDGAIITEEISWACSGVQTAMEANGLAEMPVILAANDEQKKKYLGRMT---- 144

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                    +  +    G+TE   G+D+A I +   K  D         W  ++  ++ F
Sbjct: 145 ---------EEPLVASYGVTEPIAGSDVAGIKTTAVKKGDDYVLNGNKMWITNAGHANWF 195

Query: 244 IMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +LA+ +            + DG   GL   R +  +G R++ T  + F +        L
Sbjct: 196 FVLAKTDPNAKASKAFTGFIVDGDSAGLTRGRKEINMGQRASDTRGVTFEDVVVPAANRL 255

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M          A  +V   + +L EA  YA+ R   G  + D   +   +
Sbjct: 256 GAEGDGFKIAMGAFDRTRPPVAAGAVGLAQRALDEATAYAKDRKAFGRPIADNQAVAFML 315

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+ +  A  ++ R A   D+ +  +         A I K +   +A     +A++  
Sbjct: 316 ADMAIGVETARLITRRAAWEVDQGRRNT-------YYASIAKAFAADVANKNATDAVQVF 368

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+GY  +  + +  R++    I  G+     + +   L
Sbjct: 369 GGNGYNSDYPVEKLMRDAKIYQIYEGTAQIQRVIISREL 407


>gi|17533517|ref|NP_493832.1| Acyl CoA DeHydrogenase family member (acdh-9) [Caenorhabditis
           elegans]
 gi|15150665|gb|AAK85472.1|AC006632_7 Hypothetical protein F28A10.6 [Caenorhabditis elegans]
          Length = 409

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 129/371 (34%), Gaps = 27/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK    P    +LR++   G                + H         M  +     +
Sbjct: 52  DWDKQGELPM--DVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYI 109

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S     A M+      ++ +D  P              M          LTE   G+D A
Sbjct: 110 SIHNMCAWMLDTYGPEKLKEDLLPD-------------MAVFKKLGSYCLTEPDAGSDAA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
           +I +   K  D  Y ++G K F+S    S+ + ++ + +G   G   +  L+ +    G 
Sbjct: 157 SIRTTATKKGD-YYVVNGSKAFISGAGTSNNYFVMMRQDGAAPGAKGIFCLMIEDGTEGF 215

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSG 327
            Y + ++K+G  S  T  L F +    +   +                  ++ A  S+  
Sbjct: 216 SYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRINIASCSLGA 275

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + S+  AI + + R   G  L D    +  +A++A  +  +  +    A   D      
Sbjct: 276 AQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDDPEK 335

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                   +  + K         V+  A++  GG G++++  + ++ R+   + IL G+ 
Sbjct: 336 VA------LCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIRVHQILEGTN 389

Query: 448 NAMVLDVLNLL 458
             M L +   L
Sbjct: 390 EMMRLLISRDL 400


>gi|118403322|ref|NP_080138.2| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Mus
           musculus]
 gi|26346212|dbj|BAC36757.1| unnamed protein product [Mus musculus]
 gi|26364551|dbj|BAB26255.2| unnamed protein product [Mus musculus]
 gi|148693364|gb|EDL25311.1| acyl-Coenzyme A dehydrogenase family, member 8 [Mus musculus]
          Length = 413

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 60  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 118 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 165 SDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GESGAKGISCIVVEKGT 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 223 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 283 LGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +   A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 339 --QEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 396

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 397 GSNEVMRMLISRNLLQ 412


>gi|115969291|ref|XP_001195219.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 744

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 116/287 (40%), Gaps = 17/287 (5%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P+        L ++E   G+D+ ++  + ++  D         W  + P +D  ++ A+ 
Sbjct: 471 PLISGEHIGALAMSESGSGSDVVSMKLKAERKDDHYLLNGSKFWITNGPDADVLVVYAKT 530

Query: 250 E-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
           + G      +   L +   +G    +  +K+G R + T EL F +    +   +G LN  
Sbjct: 531 DLGVEPSQGITTFLIEKGMDGFSTAQKLDKLGMRGSNTCELVFEDCKVPVENVMGSLNKG 590

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +     L  L  A   +  M+ +   A  Y  +R   G  + +  +M+  +AD+   
Sbjct: 591 VYVLMSGLDLERLVLAAGPIGLMQAACDVAFPYLHQRKQFGRPIGEFQLMQGKMADMFTR 650

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + +  +  + +A + D     + + A   ++A        + A  V  +A++C+GG+GYI
Sbjct: 651 LNSIRSYVYNVARAADRGHVSARDCAGVILVAA-------ETATQVCLDAIQCLGGNGYI 703

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +    R  R++    I  G+           L  G +  E+  STL
Sbjct: 704 NDYPTGRLLRDAKLYEIGAGTSEV------RRLIIGRSFNEEFKSTL 744


>gi|152977273|ref|YP_001376790.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152026025|gb|ABS23795.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 594

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 84/439 (19%), Positives = 160/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFARAGGFAITHGAHVGIGSLPIVLFGNEDQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+V+G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKVDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G V    I
Sbjct: 204 --FSAFIVEKEYPGVSTSPEEKKMGIKCSSTRTLILEDALVPKENVLGEIGKGHVIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAIEISAEYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++   V+ E ++  G
Sbjct: 322 VYRTVGLFESRMSTLTEKEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYVVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKHL 460


>gi|197122616|ref|YP_002134567.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172465|gb|ACG73438.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 379

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD  E  P    ++ +    GL        +        A  +    +       
Sbjct: 26  PHAAAWDASETFP--REVVAKLGAMGLLGITVPERYGGAGMGALAVAVVVEEVARFDGSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +      +A   T    + + P + + E                   LTE   
Sbjct: 84  ALTVASHNGLGTGHIARFGTDAQKERYLPSLATGE-------------RLAAWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +A+ +   +  D         +     +  +F++LA+ +       +   + +   
Sbjct: 131 GSDASAMRTTAVRRGDAWALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITAFILEPGM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
           +G   + +  K+G RS+ T +L            L  V  G ++ ++IL    +    ++
Sbjct: 191 SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGEVDHGFIDTLQILDRGRITIGALA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +AD+A ++ AA  L  R A   D  +
Sbjct: 251 VGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVRRAAALCDAGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A+ A       K +  + A    + A++  GG GY  +  + RH+R++    I  
Sbjct: 311 PFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHFRDAKLTEIGE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 364 GTSEVQRMVISREILR 379


>gi|307326656|ref|ZP_07605849.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887640|gb|EFN18633.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 390

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 120/341 (35%), Gaps = 24/341 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              F    +     ++       A+L  G  +S    +   +A   +     +  P +  
Sbjct: 65  PEEFGGGDQPYEVYLQVLEELAAARLTVGLGVSVHTLACHALARYGSKEQRAEHLPAMLG 124

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                          +     L+E   G+D A +T++  +  D         W     ++
Sbjct: 125 G-------------GLLGAYCLSEPSSGSDAAGLTTRATRDGDTWTLEGTKAWITHGGIA 171

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           D + +LA+         +   L      GL     ++K+G   + T ++           
Sbjct: 172 DFYTVLARTGPER-TRGISAFLVPAGTPGLSAAAPEHKMGMAGSPTAQIHLDGVRVPDAR 230

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G+                L  A  +V   + +L EA+ Y  +R   G  + D   ++ 
Sbjct: 231 RIGEEGQGFAIALSALDAGRLGIAACAVGVAQAALDEALAYTAQRRQFGRPIADFQGLRF 290

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I A  AL    A   D  +  S++AA A       K +C   A  +  +A++
Sbjct: 291 MLADMATQIEAGRALYLAAARLRDAGRPFSKQAAMA-------KLFCTDAAMRITTDAVQ 343

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG GY  +  + R+ RE+    I+ G+     + +   L
Sbjct: 344 LLGGYGYTMDFPVERYMREAKVLQIVEGTNQIQRVVIARAL 384


>gi|301168211|emb|CBW27800.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Bacteriovorax marinus SJ]
          Length = 572

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 92/454 (20%), Positives = 174/454 (38%), Gaps = 41/454 (9%)

Query: 57  ELELLGEYV---LSCTAQELARMANYNT-----PQLHAYGPGGER-WD-KVEFHPAWHAL 106
           ++  +GE+         +++    N  T     P   A    G +  D KV     +H  
Sbjct: 17  DVNNVGEHAPDYGDDELKDIVEQFNKFTENEIYPTRMAGDEEGVKLVDGKVIVPSCFHGP 76

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            ++   +G +   +      +       I    + + A +        +  + +++  + 
Sbjct: 77  HKQFYENGWYALGYPEDIGGMPAPHGVSIACNSIAIGANVSFSMYYGLTRGAMNVIHQVG 136

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +      + PK+ S E+  T             + LTE   G+D+ A  S  + + +G Y
Sbjct: 137 SKEQKDFFIPKMMSGEWGGT-------------MCLTEPGAGSDVGACKSTAKPLDNGKY 183

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL-LEDGSPNGLCYQR 274
            +SG K F+SS  SD       ++LA+  G       +  F+VPR   E G  N +   +
Sbjct: 184 AISGVKIFISSGESDLYENNIHLVLAKTPGAAEGTKGLSLFIVPRFNTETGESNNVVCTK 243

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G   +AT EL F       G L+G+       +  M     L   +   +   ++
Sbjct: 244 IEEKMGIHGSATCELTFGENGECVGELIGEEFEGMANMFIMMNEARLLCGLQGEAQANLA 303

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEA 390
                 YA+ R   G  + + P ++R +  +        AL+    N FD EAK     A
Sbjct: 304 YMLTEQYAKERAQFGVEICNLPDVRRLLLRMRALSRGMRALTIYTGNLFDKEAKGDEVAA 363

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K +C      V  +A++  GG G+  E  + +  R++   SI  G+    
Sbjct: 364 KEIALLTPICKAYCSDQGFNVSVDAVQVHGGYGFCTEYGVEQFIRDTKIASIYEGTNGIQ 423

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKK 482
            +D +   +L+     F  +   ++  + S   K
Sbjct: 424 AIDFVTRKILKDKAQTFFAVGKKIQAIMASDEAK 457


>gi|262369648|ref|ZP_06062976.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315716|gb|EEY96755.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 390

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 134/386 (34%), Gaps = 29/386 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  ++ D+    PA   L ++    GL        +        AH I    +   
Sbjct: 27  KEITPIAQQVDQNNEFPA--QLWKKFGDMGLLGLTVSEEYGGTGLGYLAHIIAMQEISRA 84

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +    + + PK+ S EY                L ++
Sbjct: 85  SASIGLSYGAHSNLCVNQINRNGSEEQKQRYLPKLISGEY-------------VGALAMS 131

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  +   +D  ++ A+ +   G   +   L 
Sbjct: 132 EPNAGSDVVSMKLKAEDCGDHFLLNGSKMWITNGGDADVLVVYAKTDLHAGAKGMTAFLV 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           +    G  +    +K+G R + T  L F N         NV  G     K+L+  LD   
Sbjct: 192 EKGMEGFSHGTHLDKLGMRGSNTYPLFFDNVKVP---KENVMGGVGNGTKVLMSGLDYER 248

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             +S   + + +A       Y   R   G  L +  +M+  IAD+     A  AL + + 
Sbjct: 249 AVLSAGPLGIMDACMDTVIPYIHDRKQFGQALGEFQLMQGKIADMYSTWLACKALVYAVG 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+A          R  A     +  + A  +  E ++ +GG+GYI E S  R +R++
Sbjct: 309 AECDKADHSRS----LRKDAASAILYAAEKATWMAGETIQTLGGNGYINEFSAGRLWRDA 364

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
               I  G+     + +   L   T 
Sbjct: 365 KLYEIGAGTSEIRRMLIGRELFNETA 390


>gi|329851455|ref|ZP_08266212.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328840301|gb|EGF89873.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 596

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 93/488 (19%), Positives = 186/488 (38%), Gaps = 66/488 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--------KVEFHPAWHALLRR 109
           L+  G+   +     L   A +    +H     G++          +V     +    + 
Sbjct: 26  LKGFGDADSATVFAILEEAAKFTEEVVHPINITGDKEGCTLNPVTHEVTAPKGYREAYKA 85

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TT 167
               G      D ++        H +  A   +++   +   M P +T  ++ AL    T
Sbjct: 86  LSEAGWTALSGDPAYGGQGLP--HFVNTAFSEMLSGASSAFGMYPGLTEGAISALTAGGT 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + PK+ S E+  T             + LTE   GTD+  + S+    +DG Y 
Sbjct: 144 QAQKDVYLPKLISGEWSGT-------------MNLTEPHCGTDLGLLRSKAVPAADGSYR 190

Query: 228 LSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           +SG K ++S+   D       ++LA++EG       +  F+VP+ + D     G  N L 
Sbjct: 191 ISGQKIWISAGEHDFTSNICHLVLARIEGAPEGVKGISLFMVPKFIPDADGNPGERNSLH 250

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              L++K+G   N+T  + +    GFLLG  N     +  M         +  ++    S
Sbjct: 251 CAGLEHKMGIHGNSTCVMVYEEAKGFLLGAPNEGLKIMFYMMNAARYGVGLQGLAIGHAS 310

Query: 332 LAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLA-- 377
              A  +A+ R     +            ++  P ++R + +    I    A    +A  
Sbjct: 311 YVAAAEFAKDRLQGRALTGPKSPEKPADSILVHPDVRRMLLESRALIEGGRAFLTWVALQ 370

Query: 378 ----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
               ++ ++ K R + + +  ++ P+ K +  +    V  +AM+  GGSG+ E    +++
Sbjct: 371 ADFQHAAEDEKDREKASDFMSLLTPVLKAYLTEKGLKVTQDAMQVHGGSGFTEHFPASQY 430

Query: 434 YRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE-----QDLGSSGKKVITI 486
            R+     I  G+     LD++   L  KG    +     ++     ++ GS+  + I  
Sbjct: 431 MRDVRITLIYEGTNGVQALDLVGRKLPSKGGRAMQSFLGEIDAYIAAEEAGSAVPQYIKA 490

Query: 487 LRDSISLC 494
           L+++ +  
Sbjct: 491 LKETKAKL 498


>gi|319648126|ref|ZP_08002343.1| MmgC protein [Bacillus sp. BT1B_CT2]
 gi|317389761|gb|EFV70571.1| MmgC protein [Bacillus sp. BT1B_CT2]
          Length = 376

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 138/361 (38%), Gaps = 32/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           LL++    G         +         + +    L   + +    L   +      + L
Sbjct: 40  LLKKMAERGWMGLPIPAKYNGAGHDFITYMMTIHELSKKSAVLGAVLSVHTSIVTIPILL 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R  + +  K+ + +Y                  LTE   G+D  ++ ++ +K  D 
Sbjct: 100 NGNERQKEHYVKKLAAGQY-------------LGAFCLTEPSAGSDAGSLKTRAEKRGD- 145

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+++  + D +++ A  +   G   +   + +    G    + + K+G   
Sbjct: 146 TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISAFIVEKGTPGFFIGKNEEKMGLHG 205

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIH 337
           + TV L F N          +        KI L  LD+  + ++   + +A     EA+ 
Sbjct: 206 SLTVTLNFDNAVIPARQ---LLGEEGMGFKIALSNLDTGRIGIAAQALGIAEGALSEAVQ 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           + ++R+  G +  +   +   +AD+A    AA  L ++ A+   +     + A+ A    
Sbjct: 263 FLKKRYPDGELYKNGQALAFKLADMAARTEAARLLVYQAASLKQQGMQTGKAASMA---- 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  + A  V  EA++ +G  GY ++ S  R++R++    I  G+     + +   
Sbjct: 319 ---KLFASETAMYVAGEAVQLLGDFGYTKDFSAERYFRDAKVCEIYEGTSEIQRIVIGKH 375

Query: 458 L 458
           L
Sbjct: 376 L 376


>gi|159901122|ref|YP_001547369.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894161|gb|ABX07241.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 379

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 154/399 (38%), Gaps = 37/399 (9%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QE  R A     +        ER D+ +  P    ++++    G      D ++      
Sbjct: 9   QEFMRKAAREFAEGEIRATVAER-DEHKIWPT--DIVQKMGQLGFMGVAIDEAYGGAGLD 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTN 187
             +   A  +  +++++A   +  SV ++ +   +    T    +D              
Sbjct: 66  --YVSYAIMIEELSRVDASVGVIASVNNSLVCAGIEKFGTEEQKRDIL------------ 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
            AP+          L+E   G+D AA  ++  +  D         W  +   +D  +++ 
Sbjct: 112 -APLASGQKLGAFSLSEPGAGSDAAAQKTRAVEDGDYYIITGTKNWVTNGSKADTILLMT 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
                 G   +   L D    G+   ++++K+G RS  + ++ +    G+ +    +   
Sbjct: 171 MTAPEKGVKGITAFLIDTHEPGVSILKVEDKLGIRSAQSAQMSYD---GYRVHKSRMLGQ 227

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
           P E  KI +  L+   + ++   + +A+     A+ YA+ R   G  +I+   +   +AD
Sbjct: 228 PGEGFKIAMTILNGGRIGIASQALGIAQGAYEAALDYAKVREQFGQSIINFQAVGFTLAD 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I AA  L++  A   D+ ++           A + K +  + A     +A++  G 
Sbjct: 288 MATRIKAARMLTYHAAWLKDQGENY-------IAAAAMAKVYASETAMWTATKAVQIFGS 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GY +E  + R++R++    I  G+     L +   + K
Sbjct: 341 NGYSKEYPVERYFRDAKITEIYEGTSEIQRLVISREIAK 379


>gi|239816345|ref|YP_002945255.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802922|gb|ACS19989.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 596

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 104/567 (18%), Positives = 211/567 (37%), Gaps = 81/567 (14%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLR 108
               E  G        +E AR    N   +      G+R        +V   P +     
Sbjct: 26  LPGFEDAGLETAQAVLEECARF---NQDVVAPLNIEGDRNPSSFKDGQVATTPGFKEAFA 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-- 166
           + +  G         F      +   I AA   ++        + P ++  ++ AL+T  
Sbjct: 83  QYVSGGWQGLQHPADFGGQGLPK--TIGAACGEMLNSANMSFALCPLLSDGAIEALLTAG 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S ++  T             + LTE + G+D+A + S+ +   DG Y
Sbjct: 141 SDELKAVYLEKLVSGQWTGT-------------MNLTEPQAGSDLALVRSRAEPQPDGTY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGL 270
            + G K F++    D       ++LA+V G       +  F+VP+ L          N +
Sbjct: 188 KVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVGKDGSLGARNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G +++ T  L++ +     G+L+G  N     +  M         +  ++ 
Sbjct: 248 HCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAVGMQGIAI 307

Query: 328 MRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              +   A+ YA+ R  S            +I  P +KR +  +        A++   A 
Sbjct: 308 AERAYQHAVAYAKDRVQSRPVDGSMNASAPIIHHPDVKRMLMTMRAYTEGCRAMASVAAA 367

Query: 379 SF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++       +A++R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+
Sbjct: 368 AYDAAHHHPDAEARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL---EQDLGSSGKKVITIL 487
           +YR++   +I  G+       L        G    + + + +   E +L  SG      +
Sbjct: 428 YYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAELSKSGSPAAAAV 487

Query: 488 RDSISLCKED-KGLARFLTEK---------------IALASSAAALYRAGMNDIADVFLE 531
              +   +E    +  F+  +               + LA +  A ++   + I    L 
Sbjct: 488 LKRLKPAREAFIEVVDFVAGQTKASPNAVFAGSVPYLMLAGNLVAGWQLARSLIIAADLA 547

Query: 532 NRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           +R +D       +   RF A HI++ +
Sbjct: 548 SRSVDVDFMQAKIATARFYAEHILNRV 574


>gi|254419831|ref|ZP_05033555.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196186008|gb|EDX80984.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 384

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 134/386 (34%), Gaps = 33/386 (8%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            A+   P L       +RW++         L       G+ C     ++  +     +  
Sbjct: 29  FADELVPHL-------DRWEEEGIIDRSFWLA--CGAAGILCPQVPEAYGGLELDYRYNA 79

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                 L        +   S  + S +    T    + W P + S E             
Sbjct: 80  VVDE-ELTYAGSCAGITLQSDITVSYLIHSGTEEQKRRWLPGMVSGE------------- 125

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           V   + +TE   G+D+ AI +   +  D         +  +   +D  I+ A+ +   G 
Sbjct: 126 VITAIAMTEPGAGSDLQAIKTTAIRDGDEYVIQGSKTYITNGQTADLIIVAAKTDPAAGA 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             V  +L +    G    R  +KIG R+  T E+ F+        L+G+       + + 
Sbjct: 186 KGVSLILVEADRVGFARGRKLDKIGQRAADTSEMFFNEVRVPVSNLIGEEGRGFSMLMNN 245

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+ + +G + +  EA+ Y + R   G  + D       +AD+   + A  A 
Sbjct: 246 LPQERLQIAVKAQAGAQRAFDEAVKYTKERPAFGKTVFDFQNTSFQLADLKSKLQAGWA- 304

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                   D    R          A   K +  ++  AV   A++  GG+GY+ E  IAR
Sbjct: 305 ------HIDWCVERHIGGRLDAAQASAAKLFHTELQWAVCDAALQMHGGAGYMNETPIAR 358

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            +R++    I  G+   M L +   L
Sbjct: 359 LWRDARVQRIYGGTSEIMKLIISRSL 384


>gi|85715650|ref|ZP_01046630.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85697589|gb|EAQ35466.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 381

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 143/378 (37%), Gaps = 25/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ +  P    ++R +   G+               +                 
Sbjct: 26  PFALKWDEEKHFPV--EVMREAAALGIGGIHIRDDVGGSALSRLDGTLIFEALAQGCPTV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    ++ M+    +    + W PK+ + E             +     LTE   G
Sbjct: 84  SSFISIHNMASWMIDAYGSDEQRRKWLPKLCTME-------------LLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  +  D  Y + G K F+S   +    ++    G  G   V  L+ +    
Sbjct: 131 SDAAALRTRAARDGDH-YVVDGQKQFISGAGASDIYVVMVRTGDDGPDGVSTLVVERETP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           GL +   + K+G  +  T  + F N    +   L     G    M  L    L+ A  S+
Sbjct: 190 GLSFGVSERKMGWNAQPTRAVIFENARVPVANRLGADGLGFRIAMAGLDGGRLNIAACSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L +A+ Y + R   G  L +   ++  +AD+A ++ +A    +R A++ D    
Sbjct: 250 GGAQAALDKALGYMKERKAFGKRLDEFQALRFKVADMATELESARTFLWRAASALDRKD- 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A ++  + K     +   V  +A++  GG GY+ E  I +  R+   + IL G
Sbjct: 309 -----ADATMLCAMVKRLATDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +   M + V   L +G  
Sbjct: 364 TNEIMRVIVARKLIEGAR 381


>gi|90422257|ref|YP_530627.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104271|gb|ABD86308.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 596

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 87/444 (19%), Positives = 165/444 (37%), Gaps = 57/444 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-----RWD--KVEFHPAWHALL 107
                     V      E A+++      L      G+     R D  +V     +    
Sbjct: 27  LPGFSDASADVRDAILNEAAKLSEQ---VLLPLNRVGDKEGCTRHDDGRVTTPTGFKEAY 83

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           ++    G         F             A     A +        ++ + + + +   
Sbjct: 84  KQVAEGGWLGLSAPEEFGGQGLPSTLSHTVAEFLTSANMAFSMYHGLTMGATAALLVHGR 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     + PK+ + E+  T             + LTE + GTD+  + ++  K +DG Y 
Sbjct: 144 PEQKAIFIPKMVTGEWTGT-------------MNLTEPQCGTDLGLLRTKAIKQADGSYK 190

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           ++G K F+S+   D       ++LA++EG       V  F+VP++L +     G  NG+ 
Sbjct: 191 ITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNADGSLGGRNGVT 250

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G   NAT  + + +  G+L+G+ N     +  M     L  A+  ++   V+
Sbjct: 251 CGAIEHKMGIHGNATCVMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVA 310

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF----- 374
              A+ YA+ R                  +I  P ++R +  I     AA A+       
Sbjct: 311 YQNAVIYAQERLQGRSLTGAKATDKPADPIIVHPDIRRTLLTIRAFNEAARAMVVWTALK 370

Query: 375 -RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             +A+  ++AK R     +  +M P+ K     +  A    A +  GG GYI +  + + 
Sbjct: 371 GDVAHRSEDAKERQAADDHMGLMTPVLKGVLTDVGFANAVSAQQVWGGHGYIADNGMEQF 430

Query: 434 YRESPANSILLGSGNAMVLDVLNL 457
            R++    I  G+     LD++  
Sbjct: 431 VRDARIAMIYEGANGIQALDLVGR 454


>gi|254510044|ref|ZP_05122111.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533755|gb|EEE36743.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 380

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 127/376 (33%), Gaps = 25/376 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P   +W+     P    L  +    G                +           MA 
Sbjct: 23  HIAPFARQWETDGTIP--KDLWPKIGELGFGGLYVSEEGGGSGLGRLDATLVFEALSMAC 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+    +  +     P I S E               +   LTE 
Sbjct: 81  PSVAAFLSIHNMCAKMLDSFASDDLKSRIMPGILSLE-------------TVLSYCLTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D AA+ ++ ++ ++G        +      SDA++ + +  G  G   V  +  + 
Sbjct: 128 GSGSDAAALKTRAERTNEGFTLNGTKAFISGGGYSDAYVCMVRT-GIDGPKGVSTVYVED 186

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              GL +  L+ K+G +S  T +++F +        +     G    M  L    L+ A 
Sbjct: 187 GTPGLSFGALEQKMGWKSQPTAQVQFDDCKIPADNLVGTEGDGFKYAMMGLDGGRLNIAA 246

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+   +  L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D+
Sbjct: 247 CSLGAAQYGLDMTLQYMSERKAFGQPIDQFQALQFRLADMEIELQAARTFLRQAAWKLDQ 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                     A     + K    +    V+ + ++  GG GY+ +  I +  R+   + I
Sbjct: 307 GAPD------ATKFCAMAKKLATETGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQI 360

Query: 443 LLGSGNAMVLDVLNLL 458
           L G+   M + V   +
Sbjct: 361 LEGTNEIMRVIVARQM 376


>gi|163800392|ref|ZP_02194293.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
 gi|159175835|gb|EDP60629.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4]
          Length = 389

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 140/378 (37%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L  +    GL     D +         AH +    +   
Sbjct: 29  EHIAPIAANIDRDNQFP--NHLWTKLGDMGLLGVTVDEANGGSGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +    +P   + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGSPVQREKYLPKLIDGSH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+     G   +   + 
Sbjct: 134 EPNSGSDVVSMQLRAEDKGDHFLMNGSKMWITNGPDADTIVVYAKTNPEGGSHGISAFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + + +G  + +  +K+G R + T EL F N       LLG+LN     +        +  
Sbjct: 194 ERTFDGFSHAQKLDKLGMRGSNTCELVFKNCLVPKENLLGELNRGVEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L E + Y   R   G  + +  +++  +AD+   + AA A  + +A + 
Sbjct: 254 AAGPLGIMQACLDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMNAAKAYVYAVAAAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA           +  ++A  +  +A++ +GG+GYI E +  R  R++   
Sbjct: 314 DRGECMRKDAAG-------VILYSAELATQMSLDAIQILGGNGYINEYATGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|52082252|ref|YP_081043.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52787644|ref|YP_093473.1| MmgC [Bacillus licheniformis ATCC 14580]
 gi|52005463|gb|AAU25405.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52350146|gb|AAU42780.1| MmgC [Bacillus licheniformis ATCC 14580]
          Length = 376

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 137/360 (38%), Gaps = 30/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           LL++    G         +         + +    L   + +    L   +      + L
Sbjct: 40  LLKKMAERGWMGLPIPAKYNGAGHDFITYMMTIHELSKKSAVLGAVLSVHTSIVTIPILL 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R  + +  K+ + +Y                  LTE   G+D  ++ ++ +K  D 
Sbjct: 100 NGNERQKEHYVKKLAAGQY-------------LGAFCLTEPSAGSDAGSLKTRAEKRGD- 145

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+++  + D +++ A  +   G   +   + +    G    + + K+G   
Sbjct: 146 TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISAFIVEKGTPGFFIGKNEEKMGLHG 205

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHY 338
           + TV L F N        L      +     L  LD+  + ++   + +A     EA+ +
Sbjct: 206 SLTVTLNFDNAVIPARQLL--GEEGMGFKMALSNLDTGRIGIAAQALGIAEGALSEAVQF 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++R+  G +  +   +   +AD+A    AA  L ++ A+   +     + A+ A     
Sbjct: 264 LKKRYPDGELYKNGQALAFKLADMAARTEAARLLVYQAASLKQQGMQTGKAASMA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  V  EA++ +G  GY ++ S  R++R++    I  G+     + +   L
Sbjct: 319 --KLFASETAMYVAGEAVQLLGDFGYTKDFSAERYFRDAKVCEIYEGTSEIQRIVIGKHL 376


>gi|195998726|ref|XP_002109231.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens]
 gi|190587355|gb|EDV27397.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens]
          Length = 633

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 91/489 (18%), Positives = 181/489 (37%), Gaps = 58/489 (11%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P     D+     +   L       G       + +  +  K     R   +     L
Sbjct: 96  HDPAQSDLDEAISQKSIDGLKEL----GGMGLQVPQKYGGMELKNTQYGRLCEIIATYDL 151

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G  M    +     + L    +  + + P + S                     LTE 
Sbjct: 152 SIGIFMGAHQSIGYKGILLYGNEKQKEKYLPSLVSG-------------DKLAAFCLTEP 198

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGRVGCFLV 258
             G+D  +I ++    SDG  Y L+G+K ++S+   +D   + AQV     +       V
Sbjct: 199 SSGSDANSIQTKAVLDSDGKHYILNGNKIWISNGGLADVMTVFAQVPFQSSDSEKVSQRV 258

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G+     + K+G RS+ T  + F N    +    NV     +  K+ +  
Sbjct: 259 TAFIVERDFGGVTNGPPEKKMGIRSSNTASVYFDNVKVPV---ENVLGKVGDGFKVAMNI 315

Query: 318 LDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++    +      L     A++I +A  R      LI+   ++  IA +A+   A  ++
Sbjct: 316 LNNGRFGMGAGMSGLIRMLIAKSIEHANNRVQFRRKLIEYQSIQEKIAKMAITHYAVESV 375

Query: 373 SFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ ++N+ D   K    EAA ++++   + +  C        E ++ +GG GY+ E +I 
Sbjct: 376 AYAVSNNMDRGIKEYQVEAAISKVLGSESGWNTCD-------ECLQILGGIGYMREANIE 428

Query: 432 RHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ---DLGSSGKKVITIL 487
           R  R+     I  G+ + + L + LN ++   N  ++L   +++   + G+   + I   
Sbjct: 429 RFMRDLRIFRIFEGTNDILRLFIALNGVQYAGNHLKELQKAMKEPISNFGTLWDQGIKRS 488

Query: 488 RDSIS----------LCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIADVFLENRFL 535
           R  I              + +  A  +T++I     +    L + G   + + FL  R  
Sbjct: 489 RQFIGISNNEELIENAAPQLRDSASKITQRIEEFGVTVEKLLLKYGKQIVDEQFLLTRLA 548

Query: 536 DNCHSTHCM 544
           D     + M
Sbjct: 549 DASIDVYTM 557


>gi|256111872|ref|ZP_05452833.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
          Length = 322

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 126/320 (39%), Gaps = 31/320 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ + +   +  + +  T    +++ P++ S E             +     LT+     
Sbjct: 27  YIGTNNGIGSIGILIDGTDEQKRNYLPRLASGE-------------LLSSFCLTKP---- 69

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP 267
           D A++ +   +  D  Y L+G K F+++ P++D F ++A+      G   +   + + + 
Sbjct: 70  DAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNS 128

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIM 323
            GL   +   K+G +   T  + F N        +      G    MK+L    L  A +
Sbjct: 129 PGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAAL 188

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S       LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  
Sbjct: 189 STGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSG 248

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+     I 
Sbjct: 249 QNVSTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIY 301

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     + +   + +   
Sbjct: 302 EGTTQIQQIVIARNMIREAR 321


>gi|320168870|gb|EFW45769.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 419

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 135/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E +PA    +R +   G      +  F      +              +  
Sbjct: 66  PNMLEWDAKEIYPA--ETMRAAAKLGFGAIYCNPDFGGTGLSRMDGTVIFEALSTGCVST 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+S        +    +    + + P + + E                   LTE   G
Sbjct: 124 SALLSIHNMVVYAIDSFASVEQREKYIPSLANGERF-------------ASYCLTEPGAG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S     D ++++ +  G  G   +  +L +   
Sbjct: 171 SDAASLVTSAKREGD-FYVLNGTKSFISGGGEHDVYMVMCRT-GGPGAKGISCVLVEKGT 228

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  S+ T ++ F +    +   +G                 ++ +  S
Sbjct: 229 PGLSFGQKERKLGWNSSPTRQVIFEDVKVPIANRVGKEGEGFSIAMQALNGGRVNISACS 288

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + +L+ A  +   R   G  L      +  +A++A  + A+  +  + A + D   
Sbjct: 289 LGGAQEALSIAREHLLVRKQFGKSLASLQNSQFKLAEMATGLQASRLMVRQAAQAMDSKH 348

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  +  + K +       +  +A++  GG GY+ +  + +  R+   + IL 
Sbjct: 349 PA------AASLCAMAKLFATDTCFDICNQALQLHGGYGYLRDYKVQQFVRDLRVHQILE 402

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   L
Sbjct: 403 GTNEIMKVIVGRDL 416


>gi|189466830|ref|ZP_03015615.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM
           17393]
 gi|189435094|gb|EDV04079.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM
           17393]
          Length = 568

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 88/458 (19%), Positives = 169/458 (36%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTRQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDGRGLSMFIYDKREGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R      +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFNKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDVYKALDDISRE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + +  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAYDCIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL-FSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+       +E +  S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLRDYETIPCSEEMQPLMDRLKEMTNKFEA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE         +AR L E  A+   +  L +  
Sbjct: 489 VTNATKEAANQELLDFVARRLYEMAAVCVMSHLLIQDA 526


>gi|26990266|ref|NP_745691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985215|gb|AAN69155.1|AE016549_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 589

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 176/531 (33%), Gaps = 62/531 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD------KVEFHPAW 103
            S +   L  L E + + TA  +   A+  T QL       G+         +V     +
Sbjct: 21  ASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSRNGDEQGVCFDAGQVTTPEGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G      +  +  +   +   +    +   A        + S  S   + 
Sbjct: 81  REAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYAADCSFSLYSALSAGSCLAID 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + P ++   +  T             + LTE   GTD+  I ++ +  +D
Sbjct: 141 AHASEALKATYLPPLYEGRWAGT-------------MCLTEPHAGTDLGLIRTRAEPQAD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G   +SG K F++    D       ++LA++         +  FLVP+ L +     G+ 
Sbjct: 188 GSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEADGRLGAR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  +  
Sbjct: 248 NAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLTAMFTMMNYERLSIGIQGIGC 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS-- 373
              S   A  YA  R  S               +I    ++R +  +     A  A +  
Sbjct: 308 AEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMRTLTEAGRAFAVY 367

Query: 374 ----FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                 +A   ++A  R        ++ P+ K +             +  GG GYI E  
Sbjct: 368 VGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD+L   +L  G        S + +            L
Sbjct: 428 QEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEV-RAFSVDAPLHREAL 486

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAA---LYRAGMNDIADVFLENRFL 535
           + S++  +      R    + A   SA A   L   G+   A  ++  R  
Sbjct: 487 QASLARLEATSSWLRAQAGEDANLVSAVAVEYLQLFGLT--AYAYMWARMA 535


>gi|148685766|gb|EDL17713.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_a
           [Mus musculus]
          Length = 480

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 132/352 (37%), Gaps = 35/352 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     +  +     + +       +  +A+++A   +   + 
Sbjct: 100 ENSKMEKSVIQGLFQQGLMGIEVEAQYGGT--EASFFCSVLVIEELAKVDASVALLCDIQ 157

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     +      + PK+               T       L+E   G+D  A+
Sbjct: 158 NTIINNLFRKHASEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAM 203

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W   +  ++ F++ A V+   G   +   L D    G    +
Sbjct: 204 KTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGK 263

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N         N+        K  I  L+   + ++   + LA
Sbjct: 264 RENKMGIRASSTCQLTFENVKVPET---NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 320

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +        Y + R   G  + D   ++  +A +A  + A   L++  A   +  +   +
Sbjct: 321 QGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIK 380

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           EA+ A       KY+  ++A    ++ +E +GG GY ++  + + +R++   
Sbjct: 381 EASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIG 425


>gi|71424988|ref|XP_812975.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70877815|gb|EAN91124.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 140/383 (36%), Gaps = 34/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+         +++     GL                   I A           
Sbjct: 51  PRARRMDEG--SAMEKEVIKELFEAGLMSIEIPAEHGGGDMSFFSSILAIEEISRVDPSV 108

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  + + L       +  + P + S              S      LTE   
Sbjct: 109 SVLVDVHNTLVNNIFLRFANSEQNAKFLPDLAS--------------SCVGCFCLTEAES 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-S 266
           G+D  A+ ++ +K  D         +  +   +D F+++A V+   G   +   + D   
Sbjct: 155 GSDAFALRTRAEKKGDRWVINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKRK 214

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
            +G+   R  +K+G R+++TVE+ F N       + N+     +  +I I  L+   + +
Sbjct: 215 SSGIHVGRPLDKLGLRASSTVEINFENCEVP---EENLIGEVGKGYQIAIATLNEGRIGI 271

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+        Y  +R      + D   ++   A+ A +I AA  + +  A   
Sbjct: 272 GAQMVGIAQGAMDIVMPYLFQRKQFNTPVGDFQALQMQYAECATNIHAARLMVYNAARKK 331

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +S  +EAA A       K +  ++A    ++A+E  GG G+  +  + R YR++   
Sbjct: 332 LMGESFVKEAAMA-------KLFGSQVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIG 384

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
           +I  G+    +  +  L++K  N
Sbjct: 385 AIYEGTSIIQLQTIAKLIKKEYN 407


>gi|240139993|ref|YP_002964470.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
 gi|240009967|gb|ACS41193.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1]
          Length = 596

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 109/561 (19%), Positives = 193/561 (34%), Gaps = 84/561 (14%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG--ERWD-KV 97
           LL  ++A                +      E  R+A      L+      G   R D  V
Sbjct: 14  LLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCARREDGSV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G         F        H +  A    ++       M P +T
Sbjct: 74  VTPKGFKAAYDAYAAGGWMGLSLPEEFGGQGLP--HVLNTAMQEFVSGANLALSMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    +P     + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    +++K+G  +N+T  + +    G+L+G  N     +  M     L 
Sbjct: 239 ADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +     +   A+ YA+ R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    A + D A    + A          +M P+ K        A   EA +  GG
Sbjct: 359 AARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GY+EE  +++  R++    I  G+     +D++                L +D G +  
Sbjct: 419 HGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKDGGRAMM 465

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFLDNCH 539
             +T ++  I    ED+G+  F+          A   L  A M  + + F +    DN  
Sbjct: 466 AFLTEVQTFIKDHGEDEGMKPFVA-----PLQPALNDLQAAVMWLMQNAFSK---PDNAG 517

Query: 540 STHCMLHGRFNAAHIIDSLYL 560
                     +  H++  + L
Sbjct: 518 ------AAATDLMHLLGQVVL 532


>gi|265993326|ref|ZP_06105883.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|262764196|gb|EEZ10228.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
          Length = 318

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 126/320 (39%), Gaps = 31/320 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ + +   +  + +  T    +++ P++ S E             +     LT+     
Sbjct: 23  YIGTNNGIGSIGILIDGTDEQKRNYLPRLASGE-------------LLSSFCLTKP---- 65

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP 267
           D A++ +   +  D  Y L+G K F+++ P++D F ++A+      G   +   + + + 
Sbjct: 66  DAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVERNS 124

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIM 323
            GL   +   K+G +   T  + F N        +      G    MK+L    L  A +
Sbjct: 125 PGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHIAAL 184

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S       LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   D  
Sbjct: 185 STGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSG 244

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+     I 
Sbjct: 245 QNVSTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIY 297

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     + +   + +   
Sbjct: 298 EGTTQIQQIVIARNMIREAR 317


>gi|301106653|ref|XP_002902409.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
 gi|262098283|gb|EEY56335.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Phytophthora infestans T30-4]
          Length = 420

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 121/359 (33%), Gaps = 24/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL  +     F  +                        M  +  + + + 
Sbjct: 74  QEIFEKAWELGLVNTHVPEKFGGLGLGSLDGCIIGEELAYGCTGMATAMEANGLATAPLL 133

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  +   ++ +  ++              +  V     +TE   G+D+A   +   K  D
Sbjct: 134 VAGSDEQNRKYLGRLV-------------EEPVQAAYCVTEPGAGSDVAGAKTTAVKKGD 180

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  +  ++  + +LA+ +            + D    G+   R +  IG R
Sbjct: 181 NWVINGSKMWITNGGVAKWYFVLAKTDPNANAGSAFTGFIVDADTPGITVGRKEINIGQR 240

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            + T  + F +        L  V  G    M+         AI +V   R +  EA  YA
Sbjct: 241 CSDTRGISFEDVAVPEENVLGDVGYGFKIAMQAFDITRPPVAIGAVGLARRAFDEARKYA 300

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  +AD+A  I A   L+++ A   D  +  +       + A +
Sbjct: 301 LERKTMGAPIAMHQAIQFMLADMATGIEAGRQLTYKAAYEIDCGRKNT-------MYASM 353

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +    A  V  +A++  GG+G+  E  + + +R++    I  G+     + +   +
Sbjct: 354 AKRFAGDHANQVTTDAIQIFGGAGFNTEYPVEKLFRDAKIYQIYEGTSQIQRMIIAKEM 412


>gi|295695028|ref|YP_003588266.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295410630|gb|ADG05122.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 401

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 136/374 (36%), Gaps = 36/374 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+        ++L +    GL      +++        +   A     + + + 
Sbjct: 27  PYIKEWDENHHFE--RSVLDKLAGLGLMGVCIPQAYGGAGMD--YNTLALVCEELERGDT 82

Query: 149 GHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K       GLTE 
Sbjct: 83  AFRTAVSVHTGLNSMTLLQWGTEEQKQKYL-------------VPQAKGEKLGAFGLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+AA+ +   +  +G        W   + ++D F++ A  +       +   + + 
Sbjct: 130 GAGSDVAAMQTTAVRDGEGYRLNGSKIWISLADVADHFLVFAYTDKTKKHHGITAFIVER 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
           +  G   + +K K+G R+  T E+ F + +     + N      E  KI +         
Sbjct: 190 TWPGFSSRPIKGKLGIRAGNTGEIIFEDLWVP---EENRLGEEGEGFKIAMSALDNGRFT 246

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +   ++  L  ++ Y+  R   G  +    ++++ IA +A ++  +  L ++    
Sbjct: 247 VAAGACGTIQACLEASLKYSHERETFGQEIGRHQLVQQMIAKMAANLEISRLLVWKAGWL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++ +  + E + A+ +A       C  A    ++A++  G  GY  E  + R+ R + A
Sbjct: 307 KNQGQRCTREVSLAKWVA-------CDAAWEAASDAVQIHGAYGYSNEYPVERYLRNAKA 359

Query: 440 NSILLGSGNAMVLD 453
             I  G+     + 
Sbjct: 360 PVIYEGTREIHTIM 373


>gi|30923365|sp|Q9D7B6|ACAD8_MOUSE RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8;
           Short=ACAD-8; Flags: Precursor
 gi|23337095|gb|AAH37644.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Mus musculus]
          Length = 413

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 60  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 118 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 165 SDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRT-GGSGAKGISCIVVEKGT 222

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 223 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 283 LGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +   A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 339 --QEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 396

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 397 GSNEVMRMLISRNLLQ 412


>gi|328860631|gb|EGG09736.1| hypothetical protein MELLADRAFT_42430 [Melampsora larici-populina
           98AG31]
          Length = 430

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 137/399 (34%), Gaps = 28/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + LS   Q    +A   T       P    +D+   +P W  L   +   GL  +     
Sbjct: 50  FALSEDQQAYQDLARRFTA--DHIIPVAAEYDRTMEYP-WPVLKE-AWKAGLMNTHVPTK 105

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +             +             +  +  + S + +  +  +   +         
Sbjct: 106 YGGAGLGLVESSLISEEISYGCSGIQTAIEANGLAQSPLIVAGSEELKTKYL-------- 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                    ++ +     +TE   G+D+A I +   K  D         W  +   +  +
Sbjct: 158 -----GICTESPLVAAYCVTEPGAGSDVAGIKTTAVKKGDQYVINGTKMWITNGGQASWY 212

Query: 244 IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +LA+ +        +   + D +  G+   + +  +G R + T ++ F +        +
Sbjct: 213 FVLAKTDPEAAVHKSMTGFVVDANTPGITVGKKEINMGQRCSDTRQITFEDVAIPASNVI 272

Query: 303 NV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK         A  +V   + +L EA+ YA+ R+  G  +I+   +   +
Sbjct: 273 GTSGEGFKIAMKAFDITRPLVASGAVGLAQRALTEAVKYAQTRNTMGKPIIEHQNVSHML 332

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ + + A+  + ++ A   D  +  +         A I K    ++A      A++  
Sbjct: 333 AEMTIGVEASRMMVWKSAFVKDIGQRNT-------YYASIAKCMASEVAVKNAGLAVQIF 385

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+G+  E  + + YR+S   ++  G+     L +   L
Sbjct: 386 GGAGFNTEYPVEKLYRDSKIFTLYEGTSQIQRLIISKFL 424


>gi|78048318|ref|YP_364493.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78036748|emb|CAJ24441.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 597

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/514 (16%), Positives = 176/514 (34%), Gaps = 62/514 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---- 96
            L  ++                 ++    +E  R  +     L++     G  +DK    
Sbjct: 14  ALHDVLGAHALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEMGCAFDKSTHA 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P + A   + +  G +    +  F          +  + +   A L  G+    S 
Sbjct: 74  VTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +           +   +    +  T             + LTE   GTD+  + +
Sbjct: 134 GAMEALRQHGETWQQDVFLKPLIDGRWTGT-------------MCLTEPHCGTDLGLLKT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED------ 264
           + +   DG Y ++G K F+++   D       ++LA+  +   G   +   +        
Sbjct: 181 RAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVGR 240

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L  
Sbjct: 241 DGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +     +   A+ Y+R R  S               +I  P ++R +  I      
Sbjct: 301 GLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPADPIIVHPDVRRMLLTIKSLTEG 360

Query: 369 ATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +  L+   A+  D A        R++       + PI+K    + +      A++C GG 
Sbjct: 361 SRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSIENTYHALQCFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLE-----QD 475
           GYI E  + +  R++   +I  G+     LD++      +     +   + +E     QD
Sbjct: 421 GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVEAFANAQD 480

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             ++  + I  LRD    C E   L R + ++ A
Sbjct: 481 GNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|71650517|ref|XP_813955.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70878886|gb|EAN92104.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 407

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/383 (19%), Positives = 140/383 (36%), Gaps = 34/383 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+         +++     GL                   I A           
Sbjct: 51  PRARRMDEA--SAMEKEVIKELFEAGLMSIEIPAEHGGGDMSFFSSILAIEEISRVDPSV 108

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+    T  + + L       +  + P + S              S      LTE   
Sbjct: 109 SVLVDVHNTLVNNIFLRFANSEQNAKFLPDLAS--------------SCVGCFCLTEAES 154

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-S 266
           G+D  A+ ++ +K  D         +  +   +D F+++A V+   G   +   + D   
Sbjct: 155 GSDAFALRTRAEKKGDRWVINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKRK 214

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
            +G+   R  +K+G R+++TVE+ F N       + NV     +  +I I  L+   + +
Sbjct: 215 SSGIHVGRPLDKLGLRASSTVEINFENCEVP---EENVIGEVGKGYQIAIATLNEGRIGI 271

Query: 326 SGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V +A+        Y  +R      + D   ++   A  A +I AA  + +  A   
Sbjct: 272 GAQMVGIAQGAMDIVMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKK 331

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +S  +EAA A       K +  ++A    ++A+E  GG G+  + S+ R YR++   
Sbjct: 332 LMGESFVKEAAMA-------KLFGSQVAEQTASKAIEWAGGIGFTRDFSLERLYRDAKIG 384

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
           +I  G+    +  +  L++K  N
Sbjct: 385 AIYEGTSIIQLQTIAKLIKKEYN 407


>gi|293605089|ref|ZP_06687481.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816492|gb|EFF75581.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 384

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 142/407 (34%), Gaps = 30/407 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +  L+   +  A+ A +Y   +L  +     RWD     P       R+   G       
Sbjct: 2   DLELTDEQRAFAQAARDYAEGELAPH---AARWDAEGIFP--RVAFARAGEMGFCAIYAS 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    ++    +  MV     P + + W P + S 
Sbjct: 57  EDIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMVGQWGQPALREAWGPLLASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A++T++ Q+  D         +   +  +D
Sbjct: 117 -------------QKLASYCLTEPGAGSDAASLTTRAQRQGDDYVLNGAKAFISGAGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+  G  G   +          G+ Y R + K+G  S +T  + F N     +  
Sbjct: 164 LLVVMARTGGE-GAGGISAFAVPADSAGISYGRKEEKMGWNSQSTRPITFENVRVPAVNL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L V   G    MK L    ++    SV   + +L  A  Y   R      L +   ++  
Sbjct: 223 LGVEGEGFKIAMKGLDGGRINIGTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + A+  +    A   D           A     + K +   M   +  +A + 
Sbjct: 283 LADMATHLVASRQMVRLAACKLDAGAPD------AATYCAMAKRFATDMGFQICLDAQQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
            GG GY+++  + R  R++  + IL G+   M + +   LLEKG ++
Sbjct: 337 HGGYGYLKDYPLERLVRDTRVHQILEGTNEIMRVIIARQLLEKGADI 383


>gi|27379530|ref|NP_771059.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27352682|dbj|BAC49684.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 375

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 131/379 (34%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     +K    PA   L +R    GL        +    +   AH +    +   +   
Sbjct: 16  PRAAEIEKANLFPA--DLWKRLGDLGLLGMTAPEQYGGSNMGYLAHIVAMEEISRGSAAV 73

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +         + + PK+ S EY                L ++E   
Sbjct: 74  GLSYGAHSNLCVNQIRRNGNDAQRERYLPKLISGEY-------------VGALAMSEPGA 120

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  +   +D  ++ A+ +   G   +   L +   
Sbjct: 121 GSDVVSMKLRADKRGDRYVLNGSKMWITNGGDADVLVVYAKTDPEAGPRGMTAFLVEKGF 180

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  + +  +K+G R + T  L F          L      V+ +   +  +  ++S   
Sbjct: 181 KGFTHGQHLDKLGMRGSNTYPLFFDECEVPAENVLGKVGEGVKVLMSGLDYERTVLSGGP 240

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   +   + Y   R   G  + D  +M+  +AD+     A  A  + +  + D   
Sbjct: 241 LGIMAACMDAVVPYMHERKQFGQPIGDFQLMQGKLADMYATWQATRAYVYAVGRACD--- 297

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R++ A   R  A     +  + A  +  EA++ +GG GY  E  + R +R++    I  
Sbjct: 298 -RADHARTLRKDAAAAILYSAEKATWMAGEAIQALGGVGYTSEFPVGRLWRDAKLYEIGA 356

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 357 GTSEVRRMLIGRELMAETA 375


>gi|328913336|gb|AEB64932.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens LL3]
          Length = 594

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 164/459 (35%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LLR++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDEIENHQFEHSVRLLRKAGDLGLLGADVPEEYGGIGLDKISSAFITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    T    K + P + S                     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGTEEQKKTYLPDLASG-------------QRIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + + +  G
Sbjct: 160 LGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKNYPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  +  YA +R      +    + +  +A ++  + A  +  +R    F++  SR
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPISSFTLTQEKLATMSARLYAMESSVYRTVGLFEDNMSR 335

Query: 387 -SEEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +EEA           A   I   + K    +    +  E ++  GG G+++E  + R Y
Sbjct: 336 LTEEAQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK   L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKALQEELMMLMPEEPGSEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                       +++K + R   +KIAL ++  A  + G
Sbjct: 454 -----------LEQEKYIVRQ-AKKIALLTAGLAAQKYG 480


>gi|56964752|ref|YP_176483.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
 gi|56910995|dbj|BAD65522.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16]
          Length = 594

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 85/457 (18%), Positives = 162/457 (35%), Gaps = 55/457 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LL+++   GL  +     +  +   +      +  +  A       
Sbjct: 53  VDEIEQHQFQHTTRLLKKAGELGLLGADVPEEYGGLGLDKISSTLISEEFSKAGAFGLSH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        +    T      + P + S E                   LTE   G+D 
Sbjct: 113 GAHVGIGTLPIVFFGTNEQKSKYLPSLASGE-------------TFAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  +       G  Y L+G K W  +S  +D FI+ A+V+G          + + + +G
Sbjct: 160 LSAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFIVYAKVDGEK----FTAFIVERTFDG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L   +    +   L  +  G V    IL        +  + 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILEDVAVPVDNVLGEIGRGHVIAFNILNIGRYKLGVGCIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           G + +L  A  YA  R      +    +++  +A +A +I A+ +  +R     +     
Sbjct: 276 GAKRALELAATYATERKQFKTTIASFALIQEKLASMATEIYASESAIYRTGGLIESRFAS 335

Query: 382 -------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                  + ++ +   A   I   + K+   +    V  EA++  GG G++ E  + R Y
Sbjct: 336 LTEEEKNDGRAVASAIAEYAIECSLNKFAGSETLDFVADEAVQIHGGYGFMAEYEVERIY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L  L+K   L E+L   + Q++  +   
Sbjct: 396 RDSRINRIFEGTNEINRLLVPGTLMRKALKGDLPFLQKAQALQEELMMLMPQEIDDTPLA 455

Query: 483 VITILRD-------SISLCKEDKGLARFLTEKIALAS 512
             T L          ++     K  A+   E+  LA+
Sbjct: 456 QETHLLAMAKKVFLMVAGTGAQKYGAQLDQEQEVLAA 492


>gi|296283477|ref|ZP_06861475.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium
           bathyomarinum JL354]
          Length = 403

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 145/412 (35%), Gaps = 38/412 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA----WHAL-------LRRSIHDG 114
                 E    + +   ++  +     R+ + E  P     W            +    G
Sbjct: 13  AEAAMLEGIEGSRWADEEIVMFDEAVRRFAQDELTPENLAQWREARMVSREAWAKCAQTG 72

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L        +        H+    R + +A  E   +   +   A+ +    T    + W
Sbjct: 73  LLGLSIAPEYGGSGGDFRHEAVLIRQFGLAGAEGFGVPLHNAICAAYIEKYGTQAQRERW 132

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + S E+                + +TE   G+D+  I ++     DG Y LSG K F
Sbjct: 133 LPGMCSGEF-------------ITAIAMTEPGAGSDLQGIRTRAVADGDG-YRLSGQKTF 178

Query: 235 LSSPM-SDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +++   ++  I++A+     G   +   + +     G    +  +KIG     T EL F 
Sbjct: 179 ITNGQQANLIIVVAKTNPDAGSKGISLFVVETDDAEGFSRGKNLDKIGTEMGDTSELFFD 238

Query: 293 NTFGFLLGDLNVSTGPV--EDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           N +      +    G    + MK L    L  A  S++ +  +LAE I Y  +R   G  
Sbjct: 239 NVYLPADNLIGGEEGQGLYQLMKELPKERLIIACESLAIIEAALAETIAYVSQRKAFGKS 298

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           ++     +  +A+   +   A           DE   R  +   +   A + KYW  + A
Sbjct: 299 ILQFQNTEFKLAECKTEAVIARTF-------IDECIVRLIDGRLSAEYASMAKYWVSEAA 351

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++    +  GG GY+ E  IA+ Y++     I  G+   M L +   L K
Sbjct: 352 QRIVDTCQQMFGGYGYMSEYPIAQMYKDVRVKRIYGGTTEIMKLLIARSLLK 403


>gi|325925092|ref|ZP_08186512.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325544508|gb|EGD15871.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 597

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/514 (16%), Positives = 176/514 (34%), Gaps = 62/514 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---- 96
            L  ++                 ++    +E  R  +     L++     G  +DK    
Sbjct: 14  ALHDVLGAHALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEIGCAFDKSTHA 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P + A   + +  G +    +  F          +  + +   A L  G+    S 
Sbjct: 74  VTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +           +   +    +  T             + LTE   GTD+  + +
Sbjct: 134 GAMEALRQHGETWQQDVFLKPLIDGRWTGT-------------MCLTEPHCGTDLGLLKT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED------ 264
           + +   DG Y ++G K F+++   D       ++LA+  +   G   +   +        
Sbjct: 181 RAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVGR 240

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L  
Sbjct: 241 DGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +     +   A+ Y+R R  S               +I  P ++R +  I      
Sbjct: 301 GLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPADPIIVHPDVRRMLLTIKSLTEG 360

Query: 369 ATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +  L+   A+  D A        R++       + PI+K    + +      A++C GG 
Sbjct: 361 SRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSIENTYHALQCFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLE-----QD 475
           GYI E  + +  R++   +I  G+     LD++      +     +   + +E     QD
Sbjct: 421 GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD 480

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             ++  + I  LRD    C E   L R + ++ A
Sbjct: 481 GNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|294626169|ref|ZP_06704775.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294667554|ref|ZP_06732769.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599521|gb|EFF43652.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292602674|gb|EFF46110.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 597

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/514 (17%), Positives = 180/514 (35%), Gaps = 62/514 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---- 96
            L  ++                 ++    +E  R  +     L++     G  +DK    
Sbjct: 14  ALHDVLGAHALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEIGCAFDKSTHA 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P + A   + +  G +    +  F          +  + +   A L  G+    S 
Sbjct: 74  VTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +           +   +    +  T             + LTE   GTD+  + +
Sbjct: 134 GAMEALRQHGETWQQDVFLKPLIDGRWTGT-------------MCLTEPHCGTDLGLLKT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           + +  +DG Y ++G K F+++   D       ++LA++         +  F+ P+   D 
Sbjct: 181 RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR 240

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L  
Sbjct: 241 DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +     +   A+ Y+R R  S               +I  P ++R +  I      
Sbjct: 301 GLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPADPIIVHPDVRRMLLTIKSLTEG 360

Query: 369 ATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +  L+   A+  D A        R++       + PI+K    + +      A++C GG 
Sbjct: 361 SRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSIENTYHALQCFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLE-----QD 475
           GYI E  + +  R++   +I  G+     LD++      +     +   + +E     QD
Sbjct: 421 GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD 480

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             ++  + I  LRD    C E   L R + ++ A
Sbjct: 481 GNAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|89899081|ref|YP_521552.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89343818|gb|ABD68021.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 569

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/545 (17%), Positives = 186/545 (34%), Gaps = 65/545 (11%)

Query: 22  LFALNQPPLFIGMNAYSS-DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80
              LN P     +  ++  D+ L          +H+ L+  G++V      E+    N +
Sbjct: 15  HEVLNAPACLQSLPTFAEVDADL----------MHQVLDEAGKFVG-----EVIAPLNRS 59

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             ++      G+    V   P + A  +     G                   +     +
Sbjct: 60  GDEVGCQFANGQ----VTTPPGFKAAYQAFWQAGWPALACAVEDGGQGLPGLLEAVLYEM 115

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A             +   V    +  +   +  KI + E+                +
Sbjct: 116 LSAANHGWTMAPGLLHGAYECVKHHASDELKTRYLGKIATGEW-------------LATM 162

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
            LTE + G+D+  + ++ Q  +DG   LSG K F+S    D       ++LA++      
Sbjct: 163 CLTEPQAGSDLGLVRTKAQPQADGSCRLSGTKIFISGGEHDLTDNIVHLVLARLPDAPPG 222

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  FL P+ + DG+ N +  +R++ K+G   +AT  + F    G+++G+       +
Sbjct: 223 PKGLSLFLSPKFMPDGARNPVHCERIEEKMGLHGSATCVMRFDEATGWIVGEPGRGLNAM 282

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRA 358
             M     L   +  +  +  +  +A  YA+ R                 +++ P M+R 
Sbjct: 283 FVMMNAARLHVGLQGIGLLDAAWQKADAYAKERRQMRAPVRGTSAAEADLIVEHPAMRRI 342

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +      I     L+++ A   D       +K ++E   +  ++ P+ K      A    
Sbjct: 343 LDTQRAWIDGGRVLAYKTALELDVIKHHPNSKRKAEAERWCSLVTPVLKAAWTAQAFNGA 402

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFS 470
           ++ ++  GG GY+ E  I +  R+S    I  G+       L V  +L  G      L  
Sbjct: 403 SDCLQVFGGHGYVREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGAGLTALLQ 462

Query: 471 TLEQDL--GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
            L  DL       K        +         A  L  ++    +   L+   M  +A  
Sbjct: 463 QLSDDLVCSEVADKAFQTQVTVLCDLTRQLVAASALDRQLPYWVADDYLHAVAMTLLAWA 522

Query: 529 FLENR 533
           + + R
Sbjct: 523 WSQIR 527


>gi|224540611|ref|ZP_03681150.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517769|gb|EEF86874.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 568

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/458 (19%), Positives = 169/458 (36%), Gaps = 47/458 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTRQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDGRGLSMFIYDKREGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R      +I+ P +   +A +   + A  AL ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFSKAIIEFPAVYDMLAIMKAKLDAGRALLYQTSRYVDIYKALDDISRE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + +  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAYDCIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL-FSTLEQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+       +E +  S   Q L    K++      
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYAATLRDYETIPCSEEMQPLMDRLKEMTNKFEA 488

Query: 490 SISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
             +  KE         +AR L E  A+   +  L +  
Sbjct: 489 VTNATKEAANQELLDFVARRLYEMAAVCVMSHLLIQDA 526


>gi|145521718|ref|XP_001446709.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414197|emb|CAK79312.1| unnamed protein product [Paramecium tetraurelia]
          Length = 385

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 129/378 (34%), Gaps = 46/378 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLYLMAQL 146
           P    WDK    P    +LR     G       +    V   R  A  I  A  Y    +
Sbjct: 48  PHSAEWDKKHHFP--KDVLRELAAMGFSTIYVKQESGGVGLDRLTASVIFEALSY--GDV 103

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                ++     A MV         K W P+  +                     LTE  
Sbjct: 104 TTTAYLTIQNMCAYMVDQFGNEEQKKTWIPRFGT-------------FDAFASYCLTEPN 150

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D   + +  +K  +  Y ++G K F+S   +SD ++++ +         V  +L + 
Sbjct: 151 SGSDSKNMKTFAKKDGND-YVINGSKCFISGGSVSDVYLVMCKT----SEKDVSCILVEK 205

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAI 322
              GL + +L++K+G  ++ T  + F N        L     G    M  L    ++ A 
Sbjct: 206 GTPGLSFGKLEDKMGWNASPTAMVLFDNVRVPQSNLLGKEGNGFKMAMSALDGGRINIAS 265

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G   +      Y   R   G  L     ++   AD+A ++  +  +  + A   D 
Sbjct: 266 CSLGGASFAFDLTKDYLHDRKQFGQPLAAFQGLQFKFADMATNLVTSRLIVRQAAQMIDN 325

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                           I     C     +  EA++  GG GY+ E  I R  R+   + I
Sbjct: 326 ---------------KICYQNSC---FNIANEALQLHGGYGYLSEYQIERIVRDLRVHQI 367

Query: 443 LLGSGNAMVLDVLNLLEK 460
           L G+   M + +   L K
Sbjct: 368 LEGTNEIMKVIISRNLLK 385


>gi|154246133|ref|YP_001417091.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160218|gb|ABS67434.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 380

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 135/401 (33%), Gaps = 38/401 (9%)

Query: 70  AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            +E+AR  AN          P    WD+ +  P     LR +   G+             
Sbjct: 11  IREMARDFANAE------IAPHAVEWDEKKHFPV--DTLRAAAALGMGGIYVQDDVGGSG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
             +                    +S    +  M+           W P++ + E+     
Sbjct: 63  LSRLDAALIFEALATGCPGTAAFLSIHNMATWMIDRFGDEDQRATWVPRLTAMEH----- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                        LTE   G+D AA+ ++  +  D  Y + G K F+S   +    ++  
Sbjct: 118 --------IASYCLTEPGAGSDAAALKTKAVRDGDH-YIVDGQKQFISGAGASDIYVVMV 168

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             G  G   +  L+ +    GL +   + K+G     T  +        +    N     
Sbjct: 169 RTGGDGPKGISTLVIEAGTPGLSFGANEKKMGWNVQPTRAVILEGVRVPVQ---NRLGAE 225

Query: 309 VEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  KI +       L+    S+ G + +L + + Y R R   G  L     ++  +AD+
Sbjct: 226 GDGFKIAMAGLDGGRLNIGACSLGGAQAALDKTLAYMRERKAFGQRLDAFQALQFRLADM 285

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++  A    +R A + D           A  +  + K +       V  EA++  GG 
Sbjct: 286 ATELEVARTFLWRAAAALDAKTPD------ATRLCAMAKRFATDAGFNVANEALQLHGGY 339

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GY+ +  + +  R+   + IL G+   M L +   L    N
Sbjct: 340 GYLADYGVEKIVRDLRVHQILEGTNEIMRLIISRALIAQGN 380


>gi|332873475|ref|ZP_08441426.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332738300|gb|EGJ69176.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 407

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 140/378 (37%), Gaps = 27/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
            P    WD+ E  P    L +++   GL    +   +  +          A + +     
Sbjct: 48  TPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGS 105

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +      A  +    +  +     P I S E                 L +TE 
Sbjct: 106 GGVHISLMVHTIGAPPIQHFGSEELKARVLPGIISGE-------------KISALAITEP 152

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLE 263
            GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL 
Sbjct: 153 GGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLI 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G+    LK K+G  ++ T  L F         LLG  N     + +   +     
Sbjct: 212 DAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFL 270

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A   
Sbjct: 271 GVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKM 330

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K +  E     +   + K    +        A++ +GG G++      R YRE   N
Sbjct: 331 TQPKLQGPE---LVVQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVN 387

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 388 MIGGGAEEIMKDLISKQL 405


>gi|328882615|emb|CCA55854.1| Isovaleryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 386

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 144/375 (38%), Gaps = 35/375 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D  E H   + ++R     GL    +   +  +     A  I    L  +    A  L +
Sbjct: 32  DYYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGIALEELARVDSSVAITLEA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  + L  T    ++W P++ + E             +    GLTE   G+D   
Sbjct: 92  GVSLGAMPLHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGG 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNG 269
             +   +  D  + ++G K F+++  +D    + +  V GR   G  L+  ++      G
Sbjct: 139 TRTTAVRDGDE-WVINGSKCFITNSGTDITGLVTVTAVTGRKPDGRPLISSIIVPSGTPG 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGM 328
                  +K+G  ++ T EL F +    +   L     G  + ++I   LD   ++++ +
Sbjct: 198 FTVAAPYSKVGWNASDTRELSFDDVRVPVANLLGEEGRGYAQFLRI---LDEGRVAIAAL 254

Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA     E++ YA+ RH  G  + D   ++  IAD+ +    A       A+     
Sbjct: 255 ATGLAQGCVDESVKYAKERHAFGRPIGDNQAIQFKIADMEMRAHMARIGWRDAASRLVRG 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +  +EAA       I K +   +A     EA +  GG G++ E  +AR +R+S    I 
Sbjct: 315 DTFKKEAA-------IAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDSKILEIG 367

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 368 EGTSEVQRMLIAREL 382


>gi|195591382|ref|XP_002085420.1| GD12323 [Drosophila simulans]
 gi|194197429|gb|EDX11005.1| GD12323 [Drosophila simulans]
          Length = 420

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 114/294 (38%), Gaps = 22/294 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F          P      A    LTE   G+D  ++ +  +K            W  +S 
Sbjct: 133 FGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSD 192

Query: 239 MSDAFIMLAQVEGRVGCF------LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++  F++ A        F       +   + D    GL   + ++K+G R++ T +L F 
Sbjct: 193 VAGVFLIFAMPARGFSFFKYNGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFD 252

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           N       + N+        K    +L+   + ++   V LA+      I Y   R   G
Sbjct: 253 NVRVP---EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFG 309

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +   M+  IA +A +I AA  +++  A   ++     +EAA A       KY+  +
Sbjct: 310 DAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASE 362

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A     + ++ +GG G+  +    ++YR+    +I  G+ N  +  +   ++K
Sbjct: 363 VAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 416


>gi|215402541|ref|ZP_03414722.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
 gi|289744476|ref|ZP_06503854.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
 gi|289685004|gb|EFD52492.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987]
          Length = 390

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 146/383 (38%), Gaps = 32/383 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+              ++   +R      +A
Sbjct: 21  KRLAPHALEWDAAKHFPV--DVLREAAELGMAAIYCRDDVGGSGLRRLDGVRIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T    KDW P++ +               V     LTE
Sbjct: 79  DPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM-------------GVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
              G+D  A++++  +      G Y L G K F+S   + D ++++A+  G  G   V  
Sbjct: 126 PGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAAGPRGVSA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G  +  T ++            L  + G      I +    
Sbjct: 185 FIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLN 244

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +
Sbjct: 245 GGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLW 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  
Sbjct: 305 RAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIV 358

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           R+   + IL G+   M L +   
Sbjct: 359 RDLRVHRILEGTNEIMRLVIGRA 381


>gi|254515219|ref|ZP_05127280.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219677462|gb|EED33827.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 586

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/445 (19%), Positives = 169/445 (37%), Gaps = 45/445 (10%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           GE + +    E  ++A      L       P      KV   P +   +R+    G    
Sbjct: 35  GEELTAALLDEGGKLAGEVLAPLRRGADMQPARCEDQKVVISPGYADAIRQLAQGGWFGI 94

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D  F      + +   A+ ++  A +        S  +A  +A   +  +   +  K+
Sbjct: 95  SADADFGGQGLPELYGTAASEMWNGADMAFALAPILSSGAALAIASHASDALKATYLEKL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+  T             + LTE   G+D+  + ++     D  Y ++G K +++  
Sbjct: 155 HTGEWTGT-------------MNLTESGAGSDLGVMKTRAVPQGDH-YLITGQKIYITWG 200

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA++         +  FLVP+ L +     G  N +     ++K+G  
Sbjct: 201 DHDAVDNIVHLVLAKLPDAPEGSSGISLFLVPKFLVNADGSLGERNDVYPVSTEHKLGIH 260

Query: 283 SNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T  + F +     G+L+G+ N     +  M     L   + S+     S   A+ YA
Sbjct: 261 GSPTCVMAFGDEGGAIGYLVGEENRGLACMFTMMNEARLKVGLQSLGATEGSYQLALAYA 320

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYA 393
           + R   G  +I+   +KR +  +     A  AL++       LA+  DEA+ R+   A  
Sbjct: 321 KDRVQGGVPIIEHADVKRMLLTMKALSEAMRALAYSEAVTMDLAHYGDEAE-RTAAQARI 379

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV-- 451
            +M P+ K W  ++   + +  ++  GG GY+EE   A++ R+     I  G+       
Sbjct: 380 DLMIPVIKGWMTEVGVELTSLGVQVHGGMGYVEETGAAQYLRDVRITPIYEGTNGIQAAD 439

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDL 476
           L    L   G +  + +   +  D 
Sbjct: 440 LVGRKLGRDGGSTMDAVLDMIRADA 464


>gi|146386728|pdb|2UXW|A Chain A, Crystal Structure Of Human Very Long Chain Acyl-Coa
           Dehydrogenase (Acadvl)
          Length = 607

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 141 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 187

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 188 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 247

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 248 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 304

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 305 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 359

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 360 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 418

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 419 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 477

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 478 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 531


>gi|91224766|ref|ZP_01260026.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91190312|gb|EAS76581.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 389

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 138/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F        AH I    +   +   
Sbjct: 33  PLAQSIDQTNDFP--NHLWSKLGDMGLLGVTTSEEFGGAGMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGTQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG+ N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGEENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYTQMNAAKAYVYAVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDSAGA-------ILYSAELATKMALDAIQLLGGNGYINEFDTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|301061637|ref|ZP_07202394.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444274|gb|EFK08282.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 382

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 137/372 (36%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+K E  P    ++++    G   S +   +          I  A     A L  
Sbjct: 26  PHAEQWEKDETFP--RDIIKKMGGLGFFASPFPEKYGGTELGFLANIIVAEELARASLGL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L   S T    + L  +    + + P I S E                   +TE   
Sbjct: 84  ACCLNMQSGTCPMTLLLNGSEEQKEKYLPGIISGE-------------KLGCFAVTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            TD+A I ++     +         W   + + DA +  A+ +       +   + +G  
Sbjct: 131 ATDVAGIETKAILDGENYVLNGSKMWITHASVFDAGVCFAKTDPSQRHKGLSAFIIEGDM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL     K+K+G RS+ T ++ F +       L+G+        E        + A  S
Sbjct: 191 PGLTGIAEKDKLGCRSSDTGQIVFEDCKVPKENLIGEEGQGFKIAESSLTYGRANIAARS 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + ++  +I YA  R   G  +    + K+ IAD+  +I A+  L +R A   D+ +
Sbjct: 251 LGIGQAAVDASIRYANEREQFGQKIGAFQMNKQIIADMVAEIDASRLLVYRAAWLQDQKR 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S E+        I K++  + A   +  A +  G   Y  E SI R YR+    +   
Sbjct: 311 PSSNES-------TIAKFYASEAAVRAVIGAAKIHGAYTYSSEYSIGRLYRDVMLMTAGE 363

Query: 445 GSGNAMVLDVLN 456
           G+ N   + + N
Sbjct: 364 GTSNIQRIIIAN 375


>gi|148228760|ref|NP_001079914.1| acyl-CoA dehydrogenase family, member 8 [Xenopus laevis]
 gi|34785111|gb|AAH56845.1| MGC64378 protein [Xenopus laevis]
          Length = 414

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 129/371 (34%), Gaps = 27/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           WD+ E  P     +R++   G                +              +     MS
Sbjct: 66  WDEKEIFPV--ETMRKAAQLGFGGIYTQTDVGGSGLSRLDTSIIFEALSTGCVSTTAYMS 123

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                  M+           + P + S                     LTE   G+D A+
Sbjct: 124 IHNMCVWMIDTFGNEEQRHRFCPSLCSM-------------DKFASYCLTEPGSGSDAAS 170

Query: 214 ITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +    GL +
Sbjct: 171 LLTSAKRDGD-CYVLNGSKAFISGGGDTDVYVVMCRT-GGSGARGISCLVVEKGTPGLSF 228

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIMSVSGMR 329
            + + K+G  S  T  + F +    +   L V   G    MK      ++ A  S+    
Sbjct: 229 GKKEKKVGWNSQPTRAVIFEDCVVPVKNRLGVEGQGFSIAMKGLNGGRINIASCSLGAAH 288

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            S+     +   R   G  L     ++  +AD+A  +  +  +    A++          
Sbjct: 289 ASVLLTRDHLAVRKQFGEPLAHNQYLQFKLADMATRLVTSRLIVRHAADALQNGTGD--- 345

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  +  + K +       +  +A++  GG GY+++ ++ +  R+   + IL G+   
Sbjct: 346 ---AATLCAMAKLFATDECFKICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEV 402

Query: 450 MVLDVLNLLEK 460
           M + V   + +
Sbjct: 403 MRMIVARSILQ 413


>gi|15616048|ref|NP_244353.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
 gi|10176110|dbj|BAB07205.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125]
          Length = 594

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 145/415 (34%), Gaps = 48/415 (11%)

Query: 95  DKVEFH--PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           D++E H       LL ++   GL  +     +  +   +         +  A   +    
Sbjct: 54  DEIENHQFDISRRLLTQAGELGLLGADVPEEYGGLGLDKISSSIITEKFSRAGGFSLSYG 113

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     +  +         K + P + +              +      LTE   G+D  
Sbjct: 114 AHVGIGSLPIVFFGNEDQKKKYLPDLATG-------------ARIAAYALTEPSSGSDAL 160

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +       G  Y L+G K W  +S  +D FI+ A+++G          + +    G+
Sbjct: 161 GAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH----FSAFIVEKDFEGV 216

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
                + K+G + ++T  L   +        L  V  G V    IL        +  + G
Sbjct: 217 STGPEEKKMGIKGSSTRTLILEDALVPKENLLGEVGKGHVIAFNILNVGRYKLGVGCIGG 276

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE----- 382
            +  +  A  YA  R      +    +++  +A++A+   AA +  +R    F++     
Sbjct: 277 SKRGIELAAKYANERKQFKQPIAKFTLIQEKLANMAVTTYAAESSIYRTGGLFEDRLGGL 336

Query: 383 -------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                   +  ++  A   I   + K    +    V  EA++  GG G++ E  + R YR
Sbjct: 337 SEEQQKDGREVAKAIAEYAIECSLNKVVGSEALDFVADEAVQIHGGYGFMAEYEVERMYR 396

Query: 436 ESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGS 478
           +S  N I  G+     L V            L  LEK T L E+L   + Q++G 
Sbjct: 397 DSRINRIFEGTNEINRLLVPGTILRKAMKGELPFLEKATALQEELMMLMPQEVGD 451


>gi|330502940|ref|YP_004379809.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328917226|gb|AEB58057.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 385

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 142/395 (35%), Gaps = 24/395 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P  + W+K    P  H + + +   GL        F  
Sbjct: 4   TQEHEELRRTVRNF--VDKEINPHVDEWEKEGRFP-IHDIFKTAGELGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +    ++ I AA  +         +     T     AL            +  S E    
Sbjct: 61  MGLDYSYSIVAAEEFGTIHCGGIPMSIGVQTDMCTPAL-----------ARFGSDELREE 109

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P     +   +G++E   G+D+A + +  +K  D         W  +SP +D   +L
Sbjct: 110 FLRPAITGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFICLL 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A             ++      G+      +K+G RS+ T ++ F N        +    
Sbjct: 170 ANTSDDKPHVNKSLIVVPMKTPGVSVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIGHEG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  M       L  A   + G+   +   I Y ++RH  G  LID  V+   +A++ 
Sbjct: 230 AGFMMQMLQFQEERLFGAANMIKGLEHCVDTTIDYCKQRHTFGQPLIDNQVIHFRMAELQ 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I A  AL ++    + + +  ++       +A + K    ++   V    ++  GG G
Sbjct: 290 TEIEALRALVYQATEQYVKGRDVTK-------LASMAKLKAGRLGREVSDACLQYWGGMG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +  ++R YR+    SI  G+   M+  +  L+
Sbjct: 343 FMWDNPVSRAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|307320823|ref|ZP_07600233.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306893533|gb|EFN24309.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 387

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 148/402 (36%), Gaps = 34/402 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L      L         +     P  +  D+    P   +L R     GL     D +
Sbjct: 8   FALGEEIDALRASVRRFASE--RIAPLADDADRSNAFPM--SLWREMGELGLLGITADEA 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    AH +    +   +        + S    + +     P     + PK+ S E
Sbjct: 64  HGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGKPAQKSRYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++  +  K  D      G  W  + P +D 
Sbjct: 124 H-------------VGALAMSEPGAGSDVVSMKLRADKRGDRYVLNGGKMWITNGPDADV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F++       + 
Sbjct: 171 LVVYAKTDPAAGPRGITAFLVEKAFPGFSAGQKLDKLGMRGSNTSELIFTDCEVP---EE 227

Query: 303 NVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G  E +K+L+  LD   + +S      M   L   + Y   R   G  + +  +M+
Sbjct: 228 NVLGGVGEGVKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + + AA A  + +A + D  ++  ++AA           +  + A A+  EA+
Sbjct: 288 GKLADMYVTMNAARAYVYAVAAACDRGETARKDAAG-------CILYAAEKATAMALEAI 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 341 QALGGNGYTNDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|291295512|ref|YP_003506910.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470471|gb|ADD27890.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 373

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 133/374 (35%), Gaps = 35/374 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            +D+   +P W  L + +   GL       ++            A      A      ++
Sbjct: 29  EYDRTGQYP-WPQLKQLA-QLGLLGMTTPEAWGGAGLDSVTWALAMEEIAAADPSVAVIL 86

Query: 153 SPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S +      M+    +    K +   +   E+                  LTE   G+D 
Sbjct: 87  SVTSGLPQYMLNRFGSEAQKKKYLVPLARGEW-------------IGAFSLTEPHAGSDP 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A++    QK+  G        W  S   +  ++++A+ E       +   + +    GL 
Sbjct: 134 ASLKLSAQKVPGGWELNGLKSWVTSGGQAQVYVVMARSEA-----GISSFIVEKDTPGLS 188

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +   + K+G  +  T EL F   F      L      +   + L  LDS  + ++   V 
Sbjct: 189 FGSPEEKMGLHAAHTCELRFEGVFVPEENLLGQEGRGL--AQALAGLDSGRIGIAAQAVG 246

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A A       YA  R   G  + +   +   +A++   IAAA AL    A   D ++  
Sbjct: 247 MARAAFEIAKQYADERTQFGQKIREFQGVGFKLAEMHTRIAAARALVLEAAAKKDRSEKY 306

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E       A   K +   +A  V  EA++ +GG GY  E  + R+YR++    I  G+
Sbjct: 307 TLE-------ASTAKLFASDVAVNVTREAVQVLGGYGYHREYRVERYYRDAKITEIYEGT 359

Query: 447 GNAMVLDVLNLLEK 460
                L +   L +
Sbjct: 360 SEIQKLVITRELYR 373


>gi|301630363|ref|XP_002944291.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 395

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 130/374 (34%), Gaps = 21/374 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+ +  P    L R+    G+        +        AH +    +   +   
Sbjct: 34  PRAAEIDRADQFPM--DLWRKLGDLGVLGITVPEQYGGADMGYLAHMVAMEEISRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +           + P++ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQIQRNGDAAQKARYLPRLISGEH-------------VGALAMSEPGA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +  + +             W  + P +D  ++ A+ E  +G   V   L +   
Sbjct: 139 GSDVMGMQLKAEAQGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGM 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F N        L       + +   +  + A+++   
Sbjct: 199 KGFSVAQKLDKLGMRGSHTGELVFENVEVPESHVLGGVNQGAKVLMSGLDYERAVLTGGP 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  +AD+   + A  + ++ +A + D   
Sbjct: 259 LGIMQSVMDNVLPYIHARKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLD--L 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              E     R        WC + A  +  E ++  GG+GYI E  + R +R++    I  
Sbjct: 317 LGQEHVRQVRKDCASVILWCAEKATWMAGEGVQLFGGNGYINEYPLGRLWRDAKLYEIGA 376

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 377 GTSEIRRMLIGREL 390


>gi|167745034|pdb|3B96|A Chain A, Structural Basis For Substrate Fatty-Acyl Chain
           Specificity: Crystal Structure Of Human Very-Long-Chain
           Acyl-Coa Dehydrogenase
          Length = 587

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 121 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 167

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 168 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 227

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 228 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 284

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 285 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 339

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 340 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 398

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 399 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 457

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 458 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 511


>gi|149048722|gb|EDM01263.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c
           [Rattus norvegicus]
          Length = 623

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/537 (17%), Positives = 182/537 (33%), Gaps = 81/537 (15%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
              +  FP V  +EL  + ++V       L +  N              + D+    PA 
Sbjct: 54  QKGVFPFPEVSQEELSEINQFVG-----PLEKFFNEEV--------DSRKIDQEGKIPA- 99

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L +    GL        +  +        R   +  M       L +        + 
Sbjct: 100 -DTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGII 158

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L+        + PK+ S E+                  LTE   G+D A+I ++     D
Sbjct: 159 LVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDAASIQTRATLSED 205

Query: 224 GIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             Y  L+G K W  +  +++ F + A+      +G +   +    + +    G+   + +
Sbjct: 206 KKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKM-TAFIVERDFGGITNGKPE 264

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS---- 331
           +K+G R + T E+ F NT   +   L  V  G    M I   L+S   S+          
Sbjct: 265 DKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRFSMGSAVAGMLKK 321

Query: 332 -LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + +   YA  R      L +  +++   A +A       ++++  +   D+        
Sbjct: 322 LIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPD--- 378

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               I A + K +  + A   ++EA++ +GGSGY+++    R  R++    I  G+   +
Sbjct: 379 --CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEIL 436

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL--------------- 493
            L +    L   G  L  ++      ++ +  + +   LRDS+                 
Sbjct: 437 RLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVDLGLSSNIAVVHP 496

Query: 494 ------CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                  +E+        E +        L R G   + +  +  R  +   + + M
Sbjct: 497 SLGHYKLEENVHYFGRTVETL--------LLRFGKTIVEEQLVLKRVANILINLYGM 545


>gi|307293077|ref|ZP_07572923.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881143|gb|EFN12359.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 384

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 143/379 (37%), Gaps = 27/379 (7%)

Query: 95  DKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           D+VE   A    ++++    GL        +  +    A +    R    A +    ++ 
Sbjct: 26  DEVEEADAMPETIVQQMRDMGLFGISVPEEYGGLGCTMAEEAAIIREITRASIAFRSVIG 85

Query: 154 PSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
            +V   S  + +  T    ++W PK  + E                  GLTE   G+D A
Sbjct: 86  TTVGIGSQGIVMDGTEEQKREWLPKFATGE-------------AIASFGLTEPEAGSDAA 132

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLC 271
           ++ +   K  D        ++  ++P +  F ++A+ E    G   +   +   +  G+ 
Sbjct: 133 SLRTVAIKDGDNYRITGTKRYITNAPRASVFTLMARTEPDVKGAAGISAFILPANTPGIS 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSG 327
           + +   K+G + + T ++   +        +      G    MK+L    +  A +S+  
Sbjct: 193 FGKPDKKMGQKGSLTTDVILDDVVVPAKNIIGGVPGRGFKTAMKVLDRGRIHIAAVSLGM 252

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  +  ++ YA  R   G  + D  +++  +AD+ +D+  A AL   +A  FD  +  S
Sbjct: 253 CQRLIDMSLQYALERKQFGQRIADFQLIQGMLADMKVDMLTAEALMQSVAAKFDAGEPVS 312

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E           KY+  +    +   A++  GG+GY+ E  + R YR+     I  G+ 
Sbjct: 313 LE-------CAALKYYASEAVGRIADRAVQIHGGAGYMAEYKVERFYRDVRLLRIYEGTS 365

Query: 448 NAMVLDVLNLLEKGTNLFE 466
                 +   + +     +
Sbjct: 366 QIQQTIIAKQMIRQAEAAQ 384


>gi|86139041|ref|ZP_01057612.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85824272|gb|EAQ44476.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 567

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/477 (17%), Positives = 163/477 (34%), Gaps = 38/477 (7%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIH 112
                    +++    E  ++ +     L       P       V   P +    +    
Sbjct: 27  DRFSEASSDLVTAILTEAGKLCDEVMAPLQRGGDLQPAKLENGVVRTSPGFGEGFKAIAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G            +            +   A L        S      +    +  + +
Sbjct: 87  GGWIGMSAAPEHGGMGLPMTLTAAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDALKE 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+ A++S+     DG Y ++G K
Sbjct: 147 MYLPKLISGEWTGT-------------MNLTEPQAGSDVGALSSKAVPNGDGTYAVTGQK 193

Query: 233 WFLSSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLK 276
            ++S   +D       ++LA+  +G  G   +   L            G+ N L    L+
Sbjct: 194 IYISWGDNDFAENVCHLVLARLPDGVPGTKGISLFLVPKYIPNADGSLGAANSLGVVSLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   + T  ++F    G+L+G  +     +  M     L      V     +  +A 
Sbjct: 254 HKMGLHGSPTCVMQFDGAKGWLVGAEHAGMAAMFTMMNNARLGVGGQGVGVAEGAFQKAT 313

Query: 337 HYARRRHVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--A 391
            YA  R         + D   ++R + ++  D  A+ A+    A++ D   +  E    A
Sbjct: 314 AYALERKQGKTPSGSIADHADVRRMLMEMKADTYASRAIMLACAHAIDMGNATDEADWKA 373

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  + PI+K +       +    ++  GG G+IEE   A+  R+    SI  G+     
Sbjct: 374 RAAFLTPISKAFGTDTGIRIADMGIQVHGGMGFIEETGAAQFLRDVRVTSIYEGTNGIQA 433

Query: 452 LD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           +D V   +  G ++  ++   +E     +      +       C+  +    +L E+
Sbjct: 434 MDLVARKMMDGGDMAHRIIDEIEAQAEGARATHPNMGEAVWQACESLRETTEWLVEQ 490


>gi|325283450|ref|YP_004255991.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324315259|gb|ADY26374.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 411

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 138/382 (36%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    P    L+R     G+  +     +       A   +      +     
Sbjct: 48  PGAAERDQTGEFPM--DLVRELGEMGIMGAQTPEKYGGAELDTATFAQIIEEIAVVDGSL 105

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + +  T    + + P + S                    GLTE   
Sbjct: 106 CLTVASHNSLCQGHILIGGTEEQKQKFLPDLAS-------------ARKLGAWGLTEPGS 152

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D A + +  ++  DG + L+G K F++   +   +++LA+ +    G+     +   +
Sbjct: 153 GSDSAGLQTNAKEQPDGSWILNGSKNFITQGSVGGTYVILARTDPPREGKGKNDGISAFV 212

Query: 263 EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
            +     G    R ++K+G RS+ T +L F +        L        + M++L    +
Sbjct: 213 FNRDEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPAEALLGERGNAFKDVMRVLDGGRV 272

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               M +   R +   A  Y   R   G  L     +   +A++   + AA  L  + A+
Sbjct: 273 GIGAMGLGLGRAAFEYAARYTLEREQFGKPLAYNQNIAFRLAEMDTKLEAARLLIRKAAD 332

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  +   A A       KY+   +      EA++ +GG GYI+E  + R +R++ 
Sbjct: 333 LKDAGQPFTIPVARA-------KYYATVVGVEACDEAIQMLGGYGYIKEYPVERFWRDNR 385

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     L +   + K
Sbjct: 386 LTRIGEGTDEVQRLVISRDVLK 407


>gi|296201439|ref|XP_002806854.1| PREDICTED: LOW QUALITY PROTEIN: very long-chain specific acyl-CoA
           dehydrogenase, mitochondrial-like [Callithrix jacchus]
          Length = 678

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 212 ILLFGTKAQKEKYLPKLASGE-------------TLAAFCLTEPSSGSDAASIRTSAVPS 258

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 259 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 318

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 319 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 375

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 376 RGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 433

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 434 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 489

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 490 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLNGIV 548

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 549 HPELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 602


>gi|150376383|ref|YP_001312979.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150030930|gb|ABR63046.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 382

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 138/377 (36%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ +  P     LR +   G+               +                 
Sbjct: 28  PHAVDWDQQKHFPV--ETLRAAAALGMAGIYVRDDVGGTGLTRLDAAMIIEALATGCPAI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T    +   P             P+    V     LTE   G
Sbjct: 86  ASFVSIHNMCAGMIDRYGTDEQRQRLLP-------------PLLTMDVLASYCLTEPGSG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  +  Y L+G K F+S   +S  +I++A+  G  G   +   + +   
Sbjct: 133 SDAAALKTKAVREGEA-YLLTGQKQFISGAGVSGLYIVMART-GEEGPKGISAFVVEKDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL +   + K+G  +  T  +   +    +    N      E  +I +       L+ A
Sbjct: 191 PGLTFGANEKKMGWHAQPTRAVMLDSVRVPV---ENRLGAEGEGFRIAMAGLDGGRLNIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +  +A+ Y + R   G  + +   ++  +AD+A D+  A    +R A++ D
Sbjct: 248 AASLGGAQSAFDKALAYVQGRRAFGKAIGEFQALQFRLADMATDLEIARTFLWRAASALD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A         A  +  + K +      AV  +A++  GG GY+ +  + +  R+   + 
Sbjct: 308 AADPE------ATKLCAMAKRFVTDRCFAVANDALQLHGGYGYLADYGVEKIVRDLRVHQ 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   +
Sbjct: 362 ILEGTNEIMRLIVSRAI 378


>gi|15607892|ref|NP_215266.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium tuberculosis H37Rv]
 gi|15840166|ref|NP_335203.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148660528|ref|YP_001282051.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra]
 gi|148821957|ref|YP_001286711.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11]
 gi|167968853|ref|ZP_02551130.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis H37Ra]
 gi|215410317|ref|ZP_03419125.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 94_M4241A]
 gi|215426005|ref|ZP_03423924.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|215429601|ref|ZP_03427520.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|215444884|ref|ZP_03431636.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|219556612|ref|ZP_03535688.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|253797697|ref|YP_003030698.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435]
 gi|254231066|ref|ZP_04924393.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C]
 gi|254363693|ref|ZP_04979739.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549718|ref|ZP_05140165.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185644|ref|ZP_05763118.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|260199766|ref|ZP_05767257.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289442154|ref|ZP_06431898.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289446316|ref|ZP_06436060.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|289553009|ref|ZP_06442219.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605]
 gi|289568703|ref|ZP_06448930.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|289749261|ref|ZP_06508639.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|289752800|ref|ZP_06512178.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|289756839|ref|ZP_06516217.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|294993210|ref|ZP_06798901.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 210]
 gi|297633260|ref|ZP_06951040.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207]
 gi|297730243|ref|ZP_06959361.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN R506]
 gi|298524241|ref|ZP_07011650.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774869|ref|ZP_07413206.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001]
 gi|306781400|ref|ZP_07419737.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002]
 gi|306783411|ref|ZP_07421733.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003]
 gi|306787782|ref|ZP_07426104.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004]
 gi|306792155|ref|ZP_07430457.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005]
 gi|306796516|ref|ZP_07434818.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006]
 gi|306802376|ref|ZP_07439044.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008]
 gi|306806584|ref|ZP_07443252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007]
 gi|306966780|ref|ZP_07479441.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009]
 gi|306970974|ref|ZP_07483635.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010]
 gi|307078705|ref|ZP_07487875.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011]
 gi|307083265|ref|ZP_07492378.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012]
 gi|313657568|ref|ZP_07814448.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN V2475]
 gi|2911026|emb|CAA17519.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE9 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880319|gb|AAK45017.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|124600125|gb|EAY59135.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C]
 gi|134149207|gb|EBA41252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504680|gb|ABQ72489.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra]
 gi|148720484|gb|ABR05109.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11]
 gi|253319200|gb|ACT23803.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435]
 gi|289415073|gb|EFD12313.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46]
 gi|289419274|gb|EFD16475.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A]
 gi|289437641|gb|EFD20134.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605]
 gi|289542457|gb|EFD46105.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17]
 gi|289689848|gb|EFD57277.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92]
 gi|289693387|gb|EFD60816.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054]
 gi|289712403|gb|EFD76415.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85]
 gi|298494035|gb|EFI29329.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308216535|gb|EFO75934.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001]
 gi|308325849|gb|EFP14700.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002]
 gi|308331745|gb|EFP20596.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003]
 gi|308335533|gb|EFP24384.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004]
 gi|308339301|gb|EFP28152.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005]
 gi|308343014|gb|EFP31865.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006]
 gi|308346899|gb|EFP35750.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007]
 gi|308350839|gb|EFP39690.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008]
 gi|308355477|gb|EFP44328.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009]
 gi|308359430|gb|EFP48281.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010]
 gi|308363337|gb|EFP52188.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011]
 gi|308367032|gb|EFP55883.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012]
 gi|323720782|gb|EGB29852.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CDC1551A]
 gi|326905027|gb|EGE51960.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis W-148]
 gi|328457476|gb|AEB02899.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207]
          Length = 390

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 146/383 (38%), Gaps = 32/383 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+              ++   +R      +A
Sbjct: 21  KRLAPHALEWDAAKHFPV--DVLREAAELGMAAIYCRDDVGGSGLRRLDGVRIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T    KDW P++ +               V     LTE
Sbjct: 79  DPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM-------------GVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
              G+D  A++++  +      G Y L G K F+S   + D ++++A+  G  G   V  
Sbjct: 126 PGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAEGPRGVSA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G  +  T ++            L  + G      I +    
Sbjct: 185 FIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLN 244

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +
Sbjct: 245 GGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLW 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  
Sbjct: 305 RAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIV 358

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           R+   + IL G+   M L +   
Sbjct: 359 RDLRVHRILEGTNEIMRLVIGRA 381


>gi|329851503|ref|ZP_08266260.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328840349|gb|EGF89921.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 584

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 98/545 (17%), Positives = 192/545 (35%), Gaps = 82/545 (15%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHPAW 103
           + +    +++     +     +  A++A      L      G+        D+V   P +
Sbjct: 24  YGTAAFPDVD---GDLRDAVLEAAAQLA---GEVLAPLNRVGDDHGSKLDGDQVTVAPGF 77

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              ++     G +    D ++      +  +     ++  A +    L + S  +   V 
Sbjct: 78  LDAIKAYAGGGWYGVAADPAYGGQGMPKTLEQACFDMFNGANMAFTLLPTLSQGAIEAVH 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      + P++ S E+  T             + LTE + G+D+AA+ ++ +   D
Sbjct: 138 AHGTQAQKDLYLPRLISGEWAGT-------------MNLTEPQAGSDLAALAARAEPNGD 184

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE-----DGSP 267
           G Y + G K F++            ++LA++         +  FL P+ L       G  
Sbjct: 185 GTYAIHGQKIFITWGEHGGAENIVHLVLARLPDAPKGTRGISLFLCPKFLVGSDGQPGER 244

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    L++K+G  ++ T  + F    G L+G  +     +  M     L      V  
Sbjct: 245 NRVKCVGLEHKLGIHASPTCVMAFEGAQGELIGPPHGGLAAMFTMMNAARLAVGFQGVGV 304

Query: 328 MRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              +  +A+ YA+ R           G  + D P ++  +A +     AA A+ F  A +
Sbjct: 305 AEAAWQQAVTYAKDRKQGRSLITGQDGAAIYDHPDVRLMLAKMKAKTEAARAICFLTAAA 364

Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D+ K   +E    R       + PI K W   +   V +  ++  GG G+IEE   A++
Sbjct: 365 IDQGKVAEDEDERLRAKRREDFLVPIAKAWSTDVGVEVASLGVQVHGGMGFIEETGAAQY 424

Query: 434 YRESPANSILLGSGNAMVLDVLNL-------------------LEKGTNLFEQLFSTLEQ 474
           YR++    I  G+      D++                     L+ G   F +    LE+
Sbjct: 425 YRDARIAPIYEGTNGIQAADLVGRKLGSDGMAAMELAGDIVHFLKFGILDFSKEAKVLEE 484

Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA------LASSAAALYRAGMNDIADV 528
            L +       +L    +   +    A    +         +    A   R+   D+A  
Sbjct: 485 ALDAFMAATEHLLAQKTAAPLDVATGATTYLQLAGDVIGGWMLLKGAVAARSAEGDVA-- 542

Query: 529 FLENR 533
           +L +R
Sbjct: 543 WLADR 547


>gi|254428827|ref|ZP_05042534.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194996|gb|EDX89955.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 379

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 135/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W+K E  P    L  +   +GL C      +                   A   A
Sbjct: 24  PHYDQWEKAEMFP--RELWNKMGENGLLCVDVPEEYGGFGANFRLSAVIVEEASRAGFGA 81

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S   A  +  +      + W PK+ + E                 +G+TE  
Sbjct: 82  LASNISVHSDIVAPYILHLGNEEQKQAWLPKMVTGE-------------AVGAIGMTEPG 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+  + ++  K  DG Y +SG K F+++      I+LA + +   G   +     D 
Sbjct: 129 AGSDLQGMKTRADKDGDG-YSISGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTVDC 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
           + +G    R   K+G+ +  T EL F N       +LG        + +      L  A+
Sbjct: 188 ALDGFARGRNLEKMGHHAADTSELFFENVKVGADQILGGEGKGFANLMNELPRERLILAL 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +++     +   I Y + R   G  +      +  +AD+   +    A   +  + +D 
Sbjct: 248 GAIAACEGMIERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVVNRAYGEQCIDQYDR 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++            A I K    ++   V  + ++  GG GY++E  I+R Y ++    I
Sbjct: 308 SE-------LTATNASIAKLTTTELQGVVADKCLQLFGGYGYMQEYPISRDYVDARIQRI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 361 YGGTSEIMKEIISREI 376


>gi|195500366|ref|XP_002097342.1| GE24541 [Drosophila yakuba]
 gi|194183443|gb|EDW97054.1| GE24541 [Drosophila yakuba]
          Length = 415

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 134/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +PA    +RR    GL        +                        
Sbjct: 58  PKARHHDREELYPA--KQVRRLGELGLMAVAVREEYGGSGLDYQAYAIGMEEVARGDAAV 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T +  +D+               P  +        L+E   G
Sbjct: 116 SIVMGVNNLYLGAVQQHGTEQQKQDFL-------------LPYTQGDHIAFYALSEPGNG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  +   I+ A V+  +    +   L   +  
Sbjct: 163 SDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITAFLTPKNVP 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G R+ +T +L   +          V   P +  KI +  LD   + ++ 
Sbjct: 223 GLTIAKKESKMGMRATSTCQLVLEDVQVPRS---RVLGAPGDGFKIAMQSLDCGRIGIAA 279

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D 
Sbjct: 280 QATGIAQAALELAVDYSQKRVAFGKQLARMQLIQQKLADMATRVETSRLLTWRAAWLKDN 339

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A++ A     +C         + ++ +GG GY  +     +YR +    I
Sbjct: 340 GLPITKEAAMAKLNASEAATYC-------AHQCIQILGGMGYTTDLPAELYYRNARVTEI 392

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   + +
Sbjct: 393 YEGTSEIQRIVIATAVLR 410


>gi|195396182|ref|XP_002056711.1| GJ10063 [Drosophila virilis]
 gi|194143420|gb|EDW59823.1| GJ10063 [Drosophila virilis]
          Length = 408

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 143/379 (37%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+ E HPA    +RR    GL        +                        
Sbjct: 51  PHARRHDREELHPA--EQVRRLGELGLMSVAVREEYGGAGLDYLAYAIGMEEVARGDGAV 108

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T    + +        +                  L+E   G
Sbjct: 109 SIVMGVNNLYLGAVQQHGTEAQKQQFLVPYTQGHH-------------IAFYALSEPGSG 155

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D +A ++  +  ++G Y LSG K W  +S  +   ++ A ++  +    +   L +   
Sbjct: 156 SDASAASTTAKFNANGDYLLSGTKAWISNSKEASGGLIFATIDKSLKHKGITAFLTEKDV 215

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R+++T +L   +         +V   P    KI +  LD   + ++
Sbjct: 216 PGLSVGKKESKLGMRASSTCQLTLDDVCVPQS---HVLGTPGGGFKIAMESLDCGRIGIA 272

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                +A+A     + YA +R   G  L    ++++ +AD+AL +  A  L++R A   D
Sbjct: 273 AQSTGIAQAALELAVDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLTWRAAWLKD 332

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                ++EAA A++ A  T  +C         + ++ +GG GY  +     +YR +    
Sbjct: 333 HGLPITKEAAMAKLHASETATYC-------AHQCIQILGGMGYTTDLPAELYYRNARVTE 385

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + + N + +
Sbjct: 386 IYEGTSEIQRIVIANCVMQ 404


>gi|88799696|ref|ZP_01115271.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88777590|gb|EAR08790.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 382

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 135/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L A+   G   D+        ++  ++   G  C         V              
Sbjct: 28  PHLEAWEAQGH-VDR--------SIWEKAGELGFLCPTMPEELGGVGGDFRFNSVIDEEI 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L        S  +A  +    +    + + P              M +      + 
Sbjct: 79  YRAGLTGIGFGLHSDIAAPYILHYGSETQKETYLP-------------AMARGEKIAAIA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+  I +    + +G + L+G K F+++  M+D  I++A+ +   G      
Sbjct: 126 MTEPGTGSDLQGIKTNAV-LKNGRWILNGSKTFITNGYMADVVIVVAKTDPEAGSKGFSL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            L D    G    +   K+G ++  T EL F++       LLG+       +        
Sbjct: 185 FLVDADTAGFEKGQPLKKVGMKAQDTCELFFNDCSLDETQLLGERGQGLRYLMQELPQER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ +V+  R  + + + YA+ R+  G  +      +  +A++  ++           
Sbjct: 245 LSVAVGAVAHARSLVDQTLAYAKERNAFGKPIAAFQNTQFKLAELDSEVTMMQVF----- 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+  +   E     +MA   KY    +   V  E ++  GG GY+ E  +AR + ++
Sbjct: 300 --IDQCLAWHVEGELDAVMAAKAKYLSTDLQCKVADECVQLHGGYGYMWEYPVARGWADA 357

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M L +   L
Sbjct: 358 RVQRIYAGTNEIMKLIISRDL 378


>gi|313498510|gb|ADR59876.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 589

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 176/531 (33%), Gaps = 62/531 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD------KVEFHPAW 103
            S +   L  L E + + TA  +   A+  T QL       G+         +V     +
Sbjct: 21  ASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSRNGDEQGVCFDAGQVTTPEGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G      +  +  +   +   +    +   A        + S  S   + 
Sbjct: 81  REAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYAADCSFSLYSALSAGSCLAID 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +   + P ++   +  T             + LTE   GTD+  I ++ +  +D
Sbjct: 141 AHASEALKATYLPPLYEGRWAGT-------------MCLTEPHAGTDLGLIRTRAEPQAD 187

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G   +SG K F++    D       ++LA++         +  FLVP+ L +     G+ 
Sbjct: 188 GSVRISGSKIFITGGEQDLTENIVHLVLAKLPDAPAGAKGISLFLVPKFLLEADGRLGAR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           N +    +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  +  
Sbjct: 248 NAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGC 307

Query: 328 MRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS-- 373
              S   A  YA  R  S               +I    ++R +  +     A  A +  
Sbjct: 308 AEASYQSAARYANERLQSRAATGPQAHDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVY 367

Query: 374 ----FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                 +A   ++A  R        ++ P+ K +             +  GG GYI E  
Sbjct: 368 VGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWG 427

Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             +  R+     I  G+     LD+L   +L  G        S + +            L
Sbjct: 428 QEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEV-RAFSVDAPLHREAL 486

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAA---LYRAGMNDIADVFLENRFL 535
           + S++  +      R    + A   SA A   L   G+   A  ++  R  
Sbjct: 487 QASLARLEATSSWLRSQAGEDANLVSAVAVEYLQLFGLT--AYAYMWARMA 535


>gi|262370549|ref|ZP_06063874.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
 gi|262314349|gb|EEY95391.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           johnsonii SH046]
          Length = 390

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL C+    ++      + + +        A   +      S   A+ + 
Sbjct: 52  RELWNKAGAMGLLCATMPEAYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYIN 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     W  ++ S E                 + +TE   G+D+ A+ +      D
Sbjct: 112 NFGREAQKHYWLTRMASGE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGD 158

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+++    D  I++ +  +   G   +  ++ +    G    +  NKIG 
Sbjct: 159 D-YIINGSKIFITNGYLCDMAIVVCKTGDSEKGSANLSLIIVEADRAGFSKGKPLNKIGM 217

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
           +   T EL F +        L +   G +  MK L    +  AI+  +G   +LA  + Y
Sbjct: 218 KGQDTCELFFDHVRVPKENLLGMEGMGFMMLMKELAWERMLVAIICQAGAEAALAHTVQY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++  +I    A         D       E +     A 
Sbjct: 278 TKERKAFGKTVSSFQNTRFKLAELRTEIDFCRAY-------LDRCMQLQLEESLGIDAAA 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY   +M   V+ E ++  GG GY+ E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 331 AAKYKISEMFSKVVDECLQLHGGYGYMLEYPIARAYLDNRANRIYAGTNEIMKELISRSL 390


>gi|256788970|ref|ZP_05527401.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772858|ref|ZP_06532236.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289703057|gb|EFD70486.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 391

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 128/344 (37%), Gaps = 25/344 (7%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  F    +     ++       A+L  G  +S    ++  +A   T     +  P +
Sbjct: 63  PYDAEFGGGEQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALATYGTKEQQAEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
                            +     L+E   G+D A++ ++  + S G + ++G K W    
Sbjct: 123 LGG-------------GLLGAYSLSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHG 169

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D + ++A+  G  G   +   L      GL     + K+G + + T ++        
Sbjct: 170 GIADFYTVMART-GEDGPRGITAFLVPADAEGLSAAVPEKKMGLKGSPTAQVHLDGVRVP 228

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LGD                L  A  ++   + +L EA+ YA  R   G  + D   
Sbjct: 229 DARRLGDEGQGFAIALSALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQG 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+A  I A  AL    A   D     +++AA A       K  C   A  V  +
Sbjct: 289 LRFMLADMATQIEAGRALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 342 AVQILGGYGYTADFPAERYMREAKVLQIVEGTNQIQRMVIARHL 385


>gi|171058802|ref|YP_001791151.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170776247|gb|ACB34386.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 390

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 131/377 (34%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA   +  +    G+H                AH +    +   +   
Sbjct: 31  PRAADIDRANQFPA--DMWMKLGDLGVHGLTVPEEDGGTGMGYVAHMVAMEEVSRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T      + P++ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCINQINRNGTAAQKARYLPRLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  +   +D  ++ A+ E ++G   +   + +   
Sbjct: 136 GSDVVSMKLRADKRGDRYVLNGSKMWITNGGDADTLVVYAKTEPQMGARGMTAFIIEKGF 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G  +    +K+G R + T  L F +         NV  G     K+L+  LD   + +S
Sbjct: 196 KGFSHGTHLDKLGMRGSNTYPLFFEDCEVPA---ENVLGGEGNGAKVLMSGLDYERVVLS 252

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M   +   + +   R   G  + +  +M+  +AD+     A  A ++ +A + D
Sbjct: 253 GGPLGIMAACMDAVVPFVHERKQFGQSIGEFQLMQGKLADMYSTFQACRAYAYAVAQACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                       R  A     +  + A  +  EA++ +GG GY  E  + R +R++    
Sbjct: 313 RGDHSRT----LRKDAAGVILYTAEKATWMAGEAIQALGGVGYTNEYPVGRLWRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|78223416|ref|YP_385163.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194671|gb|ABB32438.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 615

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/453 (18%), Positives = 165/453 (36%), Gaps = 58/453 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLH 116
           E VL     E ++ A      L      G++        +V   P      +  + +G  
Sbjct: 35  EKVLGLLLSEASKFAEK---VLFPLNIEGDKVGARFEGGEVYSVPGTAEAYQSFVENGWL 91

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            +  + +          K  A  ++  A       ++ +  +A ++ L  + +    +  
Sbjct: 92  TACEEETLGGQGLPHVIKNAAHEMFFAANFPFMCYVNLTHDAAKLIELFGSEQQKSQYLH 151

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K++  E+  T             + LTE   G+D+  I  +  + +DG Y L G K F++
Sbjct: 152 KMYGGEWLGT-------------MALTEPAAGSDVGNIEFKATRNTDGTYSLVGQKIFIT 198

Query: 237 SPMSDA-----FIMLAQVEGRV------GCFLVPRLLED-----GSPNGLCYQRLKNKIG 280
           +  SD       ++LA++EG          F+VP+   +     G  N +    +++K+G
Sbjct: 199 NGDSDVCENTVHMVLARIEGDPAGTKGLSIFIVPKFKINSDGSLGEANDVKCIGIEHKMG 258

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T  + F       G+LLG        +  M     L+  +       VS   A+ 
Sbjct: 259 IKASPTTTMSFGEKGCCTGYLLGKEQDGIKIMFHMMNASRLEVGMWGQGTCSVSYMHALR 318

Query: 338 YARRRHV--------SGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           YA  R          SG   +I  P ++R +  +   I    A+ +    + D       
Sbjct: 319 YALERRQGQSIADPDSGQVPIIHHPDIRRTLLMMKSYIQGMRAMLYYCGYAMDRMAVVDN 378

Query: 389 EAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           E           ++ P+ K +  +      + A++  GG GY +E  + +  R+S    I
Sbjct: 379 EEEKKKLQGIVDLLIPLCKAYPTEKGVEFASHAIQVYGGYGYTQEYPVEQFMRDSKVACI 438

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLE 473
             G+     +D+    +  K   +F +    ++
Sbjct: 439 FEGTTGIQAMDLALRKIRMKKGQVFAEFLKDMD 471


>gi|323137070|ref|ZP_08072150.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397831|gb|EFY00353.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 413

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 148/383 (38%), Gaps = 30/383 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +F P     LR +   G+               +             
Sbjct: 53  ERIAPYAVEWDREKFFPV--DTLREAAALGMAAITVGEEHGGAALSRFDAALIFEALANG 110

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+ +  +PR  ++W P++ S E                   LTE
Sbjct: 111 CPTIAAYLSIHNMCAGMIDVFGSPRQRREWLPRLVSME-------------TLSSYCLTE 157

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFLVPR 260
              G+D AA+ ++ ++  D +Y ++G K F+S   +      +I++A+  G+ G   V  
Sbjct: 158 PGCGSDAAALRTRAERDGD-VYVVNGEKQFISGASAGGDRHLYIVMART-GQDGPGGVST 215

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
            + +G+ +G+ +   + K+G  +  T  + F N       +LG+                
Sbjct: 216 FVIEGTSHGMRFGSNERKMGWNAQPTRAIFFENCRVPAENMLGEEGAGFKIAMAGLDGGR 275

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L+    S+ G + +L + + Y R R   G  L D   ++  +AD+A  +  A AL +R  
Sbjct: 276 LNIGACSLGGAQSTLMKTLDYMRERKAFGKPLDDFQALQFRLADMATGLETARALLWR-- 333

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                A +   +A  A I+  + K     +   V   A++  GG GY+ +  + +  R+ 
Sbjct: 334 ----AAAALDAKAKDASILCAMAKRVATDVGFDVANNALQLHGGYGYLCDYGVEKIVRDL 389

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + IL G+   M L V   L +
Sbjct: 390 RVHQILEGTNEIMRLIVARNLLR 412


>gi|307103570|gb|EFN51829.1| hypothetical protein CHLNCDRAFT_56353 [Chlorella variabilis]
          Length = 420

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 128/379 (33%), Gaps = 30/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLE 147
           P     D++   P      R++   GLH     +    +     H   A   +   +   
Sbjct: 67  PHAAEIDRLNAFPPEFEFWRKAGEWGLHGITVPQEQGGLGMGYLHHAIAMEEISRASGAL 126

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S  +   ++     R  + + P + + E+                + ++E   
Sbjct: 127 GLSYAVNSSVAIHALSRHGNQRQREKYLPMLLTGEH-------------VASIAMSEPNS 173

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  K  D         W  + P++D  I+ A+ +   G   +   +     
Sbjct: 174 GSDVVSMRCKADKKGDHYVLNGNKMWITNGPIADTLIVYAKTDPNAGKHGITGFI----- 228

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG  N     +     +  L  A   
Sbjct: 229 -GFSTAQKLDKLGMRGSDTCELLFENCEVPAENVLGQENKGVYMIMSGLDVERLVFAGGP 287

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  ++  L   + Y   R   G  L D  + +  +AD+     A  +  + +A + D  +
Sbjct: 288 LGILQACLDVTLPYCVERKQFGHRLGDFQMTQAKLADMYTATEATRSYLYSVAAAADAGR 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++             +  + A  +   A++  GG+GYI E    R  R++    I  
Sbjct: 348 INRKD-------CAAVILFAAENATRMALHAIQLYGGNGYINEYPTGRLLRDAKLYEIGA 400

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     L +   + K   
Sbjct: 401 GTSEIRRLLIGREMMKEAA 419


>gi|220917399|ref|YP_002492703.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955253|gb|ACL65637.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 379

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P    WD  E  P    ++ +    GL        +        A  +    +       
Sbjct: 26  PHAAAWDASETFP--REVVAKLGAMGLLGITVPERYGGAGMGALAVAVVVEEVARFDGSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +      +A   T    + + P + + E                   LTE   
Sbjct: 84  ALTVASHNGLGTGHIARFGTDAQKERYLPSLATGE-------------RLAAWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D +A+ +   +  D         +     +  +F++LA+ +       +   + +   
Sbjct: 131 GSDASAMRTTAVRRGDAWALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITAFILEPGM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
           +G   + +  K+G RS+ T +L            L  V  G ++ ++IL    +    ++
Sbjct: 191 SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGEVDHGFIDTLQILDRGRITIGALA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +L EA  YA+ R   G  + +   +   +AD+A ++ AA  L  R A   D  +
Sbjct: 251 VGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVRRAAALCDAGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A+ A       K +  + A    + A++  GG GY  +  + RH+R++    I  
Sbjct: 311 PFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHFRDAKLTEIGE 363

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 364 GTSEVQRMVISREILR 379


>gi|152987960|ref|YP_001349460.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150963118|gb|ABR85143.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 606

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/494 (19%), Positives = 174/494 (35%), Gaps = 61/494 (12%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A++       L H+    G   +  +V     +       +  G      
Sbjct: 37  DMVDAILGECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPRGYKEAYEAYVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKI 178
              +          + A +  +M        M P  S+ + + +    T    + +   +
Sbjct: 97  PVEYGGQGLP--MSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLTPL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS 
Sbjct: 155 TEGRWGGT-------------MCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSG 201

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G  NG+    L+ K+G +
Sbjct: 202 EHDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGAGGSLGPRNGVSCGALEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F +  GFL+G  N     +        + +AI  V+   ++   A+ YAR R
Sbjct: 262 ASATCVMNFDDATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARER 321

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRS 387
                             L+    ++R +           AL +     A+   +    S
Sbjct: 322 RSMRALSGTKEPGQVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILTS 381

Query: 388 EEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           ++A YAR       + PI K    ++        M+  GG GYI E  + +  R++   +
Sbjct: 382 DDAEYARWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIAT 441

Query: 442 ILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L    LL             + Q      K    +   ++ L K   
Sbjct: 442 LYEGTTGIQALDLLGRKVLLMTQGKAVRDFTRVVAQFAIDLLKNEPRMRGRALVLLK-LC 500

Query: 499 GLARFLTEKIALAS 512
                LT +IAL +
Sbjct: 501 AQWNLLTLRIALTA 514


>gi|195571535|ref|XP_002103758.1| GD20592 [Drosophila simulans]
 gi|194199685|gb|EDX13261.1| GD20592 [Drosophila simulans]
          Length = 415

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 143/432 (33%), Gaps = 39/432 (9%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA--------YGPGGERW 94
           L+ +               G    +     LA ++  +                P     
Sbjct: 4   LIRVARTLGQRSSGAWSARGIGAGNRGIACLAALSETHQILQKTCREFANAELAPKARHH 63

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E +PA    +RR    GL        +                          +M  
Sbjct: 64  DREELYPA--EQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGV 121

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      V    T +  +D+       E+                  L+E   G+D  A 
Sbjct: 122 NNLYLGAVQQHGTEQQKQDFLVPYTQGEH-------------IAFYALSEPGNGSDAGAA 168

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           ++  +   D         W  +S  +   I+ A V+  +    +   L      GL   +
Sbjct: 169 STTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLRHKGITAFLTPKDVPGLSIAK 228

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            ++K+G R+ +T +L   +          V   P +  KI +  LD   + ++     +A
Sbjct: 229 KESKMGMRATSTCQLVLEDVHVPRS---RVLGAPGDGFKIAMQSLDCGRIGIAAQATGIA 285

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +     A+ YA++R   G  L    ++++ +AD+A  +  +  L++R A   D     ++
Sbjct: 286 QAALELAVDYAQKRVAFGKQLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITK 345

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA A++       +C         + ++ +GG GY  +     +YR +    I  G+  
Sbjct: 346 EAAMAKLHGSEAATFC-------AHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSE 398

Query: 449 AMVLDVLNLLEK 460
              + + N + +
Sbjct: 399 IQRIVIANAVLR 410


>gi|226941823|ref|YP_002796897.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716750|gb|ACO75888.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
          Length = 594

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 181/489 (37%), Gaps = 59/489 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWD 121
            +     +E A+ A      ++  G  G  W    V   P +     +    G       
Sbjct: 34  ELAEAITEEAAKFAEGVLDPINRAGDKGNTWSDYAVTTVPGFKDAFTQFCESGWMGLKCP 93

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             F          +    ++  A +        S  +   +    +  +   + PK+ S 
Sbjct: 94  ADFGGQGLPALLSMATEEMWNAANMSFALAPMLSTGAIEALEHNGSDEIKATYLPKLISG 153

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+  T             + LTE   G+D+A + ++    +DG Y ++G K F++    D
Sbjct: 154 EWAGT-------------MNLTEPNAGSDLAQVRTKAVPQADGSYLITGQKIFITWGEHD 200

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNA 285
                  ++LA++         +  F+VP+ L +     G+ N +    +++K+G   + 
Sbjct: 201 MTDNIVHLVLARLPDAPAGVKGISLFVVPKFLVNADGSLGARNDVRCVSIEHKLGIHGSP 260

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F +     G+L+G+LN     +  M     +  A+  ++    +  +A+ YAR R
Sbjct: 261 TAVMSFGDQGGAVGYLVGELNKGLAHMFVMMNNARMGVAVQGMAISERAYQQAVEYARDR 320

Query: 343 HV---SGGI------LIDQPVMKRAIADIALDIAAATALSFRLAN------SFDEAKSRS 387
                 G        +I  P ++R +  +   I A   L++               + ++
Sbjct: 321 IQCRELGSRDPASVAIIRHPDVRRMLMTMRAQIEAQRLLTYAAGAALDRAARHPVPEEKA 380

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            + A    + PI K W  + +  + +  ++  GG G+IEE   A+H+R++   SI  G+ 
Sbjct: 381 RQQALINFLIPIVKGWNTEQSVEITSLGVQVHGGMGFIEETGAAQHFRDARITSIYEGTT 440

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLCKEDKG---- 499
               +D++   L  +     + L    +   G  +       + + ++       G    
Sbjct: 441 GIQAMDLIGRKLAMENGATAKALLEETKAVAGKLAGLGSDFAVFKANLEAGIVQAGQCVD 500

Query: 500 --LARFLTE 506
             LARF +E
Sbjct: 501 FILARFASE 509


>gi|154251231|ref|YP_001412055.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155181|gb|ABS62398.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 586

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 97/575 (16%), Positives = 195/575 (33%), Gaps = 67/575 (11%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P    M A++ + +   L        ++++      ++    +E A++A      L+   
Sbjct: 5   PPVRDM-AFTLNEV-AGLSDLLGKGAYEDVS---ADLVEAVMEEGAKLAADVLAPLNRSG 59

Query: 88  GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G +     V     +    RR +  G         +       A  +    ++  A 
Sbjct: 60  DAEGAKLKSGAVSVPSGFAEAYRRWVEGGWGSLAATTEYGGQGLPVALSVAMQEMWNAAC 119

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L  G     S  +   +    T      +  ++ S E+  T             + LTE 
Sbjct: 120 LSFGLCPILSQGAIEALTAHGTEEQKNIYLARLISGEWTGT-------------MNLTEP 166

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVG 254
           + G+D+ A+ ++     DG Y +SG K +++    D       ++LA++         + 
Sbjct: 167 QAGSDLNALKTKAVPQGDGTYRISGTKIYITYGDHDMAENIVHLVLARLPDAPPGTKGIS 226

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVST 306
            FLVP+ L +     G+ N      L+ K+G   + T  + +       G L+G  N   
Sbjct: 227 LFLVPKFLVNEDGSLGARNDAWCIGLEEKLGIHGSPTCVMSYGENGGAIGTLIGQENRGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-----------GILIDQPVM 355
             +  M     L      V+    +   A+ YA+ R                 +I+ P +
Sbjct: 287 ACMFTMMNNARLLVGTQGVAIAEAAYQHALAYAKDRKQGRPLGSTLAPGEMAPIIEHPDI 346

Query: 356 KRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +R +  +     A+ A+ +  A + D       R E  A A ++ PI K +   +   V 
Sbjct: 347 RRMLLTMKSLTDASRAICYATAVAIDGAHAGDKREEAQARADLLTPIAKSFSTDIGVEVA 406

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFS 470
           +  ++  GG G+IEE   A+  R++    I  G+       L    L     ++ +   +
Sbjct: 407 SIGVQIHGGMGFIEETGAAQFLRDARILPIYEGTNGIQAIDLVSRKLPLGNGSVVKNFIA 466

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI----------ALASSAAALYRA 520
            + +    +      +L +               T+ +           LA ++  L   
Sbjct: 467 EMRETAQQARSSNNKLLGEIGGALDGALDALDKATDYMLANLKSAPNDCLAGASPYLRLF 526

Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           G         ++   D        L  +F AA+++
Sbjct: 527 GTAAGGHYLAQSALRDPAAKARLAL-AQFYAANVL 560


>gi|73954562|ref|XP_536524.2| PREDICTED: similar to Acyl-CoA dehydrogenase family member 8,
           mitochondrial precursor (ACAD-8) (Isobutyryl-CoA
           dehydrogenase) (Activator-recruited cofactor 42 kDa
           component) (ARC42) [Canis familiaris]
          Length = 473

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 135/382 (35%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 112 PNMAEWDQKELFPV--DAMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTST 169

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       M+           + P + + E                   LTE   G
Sbjct: 170 TAYISIHNMCVWMIDTFGNEEQRHRFCPPLCTME-------------KFASYCLTEPGSG 216

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 217 SDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRT-GGPGPKGISCVVVEKGT 274

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   + N   G +  MK      ++ A  S
Sbjct: 275 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGNEGQGFIIAMKGLNGGRINVASCS 334

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     Y   R   G  L +   ++  +AD+A  + A+  +    A +     
Sbjct: 335 LGAAHASVVLTRDYLSVRKQFGEPLANNQYLQFKLADMATRLVASRLIIRNAAVAL---- 390

Query: 385 SRSEEAAYARIMAPITKYWCCKMAP--------AVIAEAMECIGGSGYIEERSIARHYRE 436
              EE   A  +  + K +               +  +A++  GG GY+++ ++ ++ R+
Sbjct: 391 --QEEREDAVALCSMAKLFATDECFAMRHYLWKKICNQALQMHGGYGYLKDYAVQQYVRD 448

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           S  + IL GS   M + +   L
Sbjct: 449 SRVHQILEGSNEVMRMLISRSL 470


>gi|170702384|ref|ZP_02893274.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132698|gb|EDT01136.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 596

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/507 (20%), Positives = 194/507 (38%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G        +E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDTVAQLPGFEEAGYDTAQAVLEESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P + A  R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGAAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + +   + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGDTVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+  + +  AR L
Sbjct: 475 ALGKLDGA---AAASMKAQLEKGARAL 498


>gi|320334371|ref|YP_004171082.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319755660|gb|ADV67417.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 393

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 140/381 (36%), Gaps = 32/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           PG    D+    P    ++R     G+  +     +       A   +    +  +    
Sbjct: 25  PGAAERDQTGEFPL--DIVRELGDLGIMGAQTPEEYGGAGLDTATFALIIEEIAAVDGSL 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + +  T    + + P + S                    GLTE   
Sbjct: 83  CLTVASHNSLCQGHILIGGTEEQKQKFLPDLAS-------------ARKLGAWGLTEPGS 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D   + ++ ++  DG + ++G K F++   +   +++LA+ +    GR     +   +
Sbjct: 130 GSDSGGLQTRAEQQPDGSWIINGSKNFITQGSVGGTYVILARTDAPRPGRSKNDGISAFV 189

Query: 263 EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
            +     G    R ++K+G RS+ T +L F +        L        + M++L    +
Sbjct: 190 FNRDEVQGFSIGRKEDKLGLRSSDTAQLIFEDMRVPETALLGTRGQAFKDVMRVLDGGRI 249

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               M +   R +   A  Y   R   G  +     +   +AD+   + AA  L  + A+
Sbjct: 250 GIGAMGLGLGRAAFDFATRYTLEREQFGKAIAHNQAIAFKLADMDTHLEAARLLLRKAAD 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  +  AA A       K +  ++      +A++ +GG GYI+E  + R++R++ 
Sbjct: 310 LKDAGRDFTVAAARA-------KLYATEVGVQACDDAIQMLGGYGYIKEYPVERYWRDNR 362

Query: 439 ANSILLGSGNAMVLDVLNLLE 459
              I  G+     L +   L 
Sbjct: 363 LTRIGEGTSEVQRLIISRALM 383


>gi|170693737|ref|ZP_02884895.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170141519|gb|EDT09689.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 596

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 97/470 (20%), Positives = 183/470 (38%), Gaps = 59/470 (12%)

Query: 73  LARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEP 126
           L   A      L      G+R      D V    P +    R+    G         +E 
Sbjct: 41  LEESAKLCGEVLAPLNVEGDRNPSSWKDGVVTATPGFKEAFRQFAEGGWQGVQHPVEYEG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYD 184
               +   I  A + ++        + P +T  ++ AL+T  T    + + PK+ S E+ 
Sbjct: 101 QGLPK--LIATACVEMLNASNLSFALCPLLTDGAIEALLTAGTDAQKQTYVPKLISGEWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + G+D+A + ++ +   DG + L G K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAE 205

Query: 243 ---FIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+          +  F+VP+ L +     G  N +    +++K+G +++ T  
Sbjct: 206 NIAHLVLARTPNAPEGVKGISLFIVPKFLINEDGSLGERNDVHCVSIEHKLGIKASPTAV 265

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +     G L+G+ N     +  M         +  V     +  +A  YA+ R  S
Sbjct: 266 LQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFAVGMQGVGVSDRAYQKAAAYAKERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                       +I+ P ++R ++ +     A+ AL++  A   D A    +EA  A   
Sbjct: 326 RPVDGSAKQPVAIIEHPDVRRMLSTMRALTEASRALAYVAAGHCDIAHRHPDEAKRAEHQ 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K W  + +  V +  ++  GG G+IEE   A++YR++    I  G+    
Sbjct: 386 AIYEFLVPIVKGWSTESSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             D++    +  G  + + L +++ + +G  G +     R       E +
Sbjct: 446 ANDLIGRKTVRDGGKVAKSLLASVAETVGLLGAQQGQAFRSMEKYLAEGQ 495


>gi|296162124|ref|ZP_06844921.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887630|gb|EFG67451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 379

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 136/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G   D+            ++  +GL C      +        H    A   
Sbjct: 29  PRQAQWDEAGC-VDR--------ETWLKAGREGLLCVTVPEEYGGGGGDFGHSAIVAEEL 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +        S  +A  +  + T    ++W P             P+ +    + + 
Sbjct: 80  HRAGVSGFSYSVHSDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIA 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ +I +   +  D  Y ++G K F+S+ +  D  +++ + +   G   V  
Sbjct: 127 MTEPGTGSDLKSIRTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R   K+G  +  T EL F N     G L+G+ N     + +      
Sbjct: 186 IMVETDRAGFRRGRKLEKVGQAAADTAELFFDNVRVPAGNLIGNENGGFIHLMEELPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+   + +   L   + Y + R      + D    K  +AD+     A   L     
Sbjct: 246 LIIAVYCAAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYI 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E K   +EAA A++ A    + C       I E ++  GG GY+ E  IAR + + 
Sbjct: 306 REHMERKLTLQEAAIAKLFATEAMWKC-------IDEMVQLHGGYGYMLEYPIARAFADM 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   +   +   L
Sbjct: 359 RVTRIFGGTSEVLRDLISRKL 379


>gi|284043121|ref|YP_003393461.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947342|gb|ADB50086.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 390

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 129/355 (36%), Gaps = 24/355 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +++++    L  +     +  V                        +  +  + + + L
Sbjct: 41  DIIKKAWELQLMNNHIPEEYGGVGLGYLDGCVIEEELAWGCSGIQTSVGCNGLATAPLIL 100

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + K++  ++              +  +     LTE   G+D++ + +   K  D 
Sbjct: 101 GGSHELKKEYLGRLT-------------EAPLLASFCLTEPDAGSDVSGMKTTAVKKGDK 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  +   ++ + + A+ +   G   +   +      G+   + ++K+G R++
Sbjct: 148 WVINGSKCFITNGSHANFYTVYAKTDKDAGHRGISAFIVPRDA-GVVVDKKEDKMGQRAS 206

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F         L+G+ N                 A M+    R ++  A+ Y++ 
Sbjct: 207 NTATITFPEVEIPADHLIGEENKGFKLAMMTLDRTRPGVAAMATGIARAAMEFAVDYSKE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  IAD+A +I A+  L+++ A   D  +  +  +++A+       
Sbjct: 267 RVQFGVPIAMHQAIQFMIADMATEIEASRLLTWKAAFQLDNGERNTLVSSHAKR------ 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +    A  V  +A++  GG G+I+E  + +  R++    +  G+     L +  
Sbjct: 321 -FAADTAMRVATDAVQVYGGYGFIKEYPVEKLMRDAKIMQLYEGTAQIQRLVIAR 374


>gi|182435009|ref|YP_001822728.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775525|ref|ZP_08234790.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463525|dbj|BAG18045.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655858|gb|EGE40704.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 384

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 140/378 (37%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P    +LR++   GL               ++  +         
Sbjct: 25  EHLAPHAVAWDQDKHFPV--DVLRKAAGLGLGGVYVREDLGGSELTRSDGVLVFEALATG 82

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S       M+    T        P++ + E                   LTE
Sbjct: 83  CPSIAGYLSIHNMVGWMIDRYGTEDQRARCLPELCTMEQ-------------LGSYCLTE 129

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLE 263
              G+D AA+ ++  +  D  Y L+G K F+S   +   +I+LA+  G  G   +   L 
Sbjct: 130 PGAGSDAAALRTRAVRDGDH-YVLTGTKQFISGAGASHLYIVLART-GDDGPRGISAFLV 187

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           +    GL +   + K+G  +  T ++           LLG+         +      L  
Sbjct: 188 ERDDPGLSFGPDEKKMGWNAQPTRQVLLDGVRLPADRLLGEEGGGFRIAMNGLNGGRLGI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+ G + +L  ++ +   R   G  L+D   ++  +A++A ++AAA AL  + A + 
Sbjct: 248 AACSLGGAQSALDRSLAHLADREAFGARLLDAQALQFRLAEMATELAAARALVRQAAEAL 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D         A A  +  + K++      +V   A++  GG GY+ E  I +  R+   +
Sbjct: 308 DR------NVAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKIVRDLRVH 361

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M + V   L
Sbjct: 362 QILEGTNEIMRVMVARSL 379


>gi|239626181|ref|ZP_04669212.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520411|gb|EEQ60277.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales
           bacterium 1_7_47FAA]
          Length = 383

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 127/371 (34%), Gaps = 27/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P   A +++    G         +          +               ++  
Sbjct: 33  DEKHEFPM--AEVKQCAEMGFLGVCVPEEYGGAGLDHLSDVLVMEQLARHSSSLASIIDA 90

Query: 155 SVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +  SM  LM  +    + +              AP           LTE + G+D A 
Sbjct: 91  HASLGSMPILMAGSEEQKQKYL-------------APAATGETLCAFALTEPQSGSDAAQ 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCY 272
           I +      D         +  +S  +  F++ A+ +    G   +   +      G   
Sbjct: 138 IRTTAVLDGDEWVINGSKAFITNSTYASTFLVAAKTDLEAKGSRGISIFIVPAGLPGFEV 197

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + + K+ NRS+ +  L F++       L+G+LN              +  + ++V   +
Sbjct: 198 GKPEEKMSNRSSYSCPLSFTDVRIPKENLVGELNRGFPIFMKCVDDGRVAISAVAVGMAQ 257

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L  A  Y++ R   G  + +   +   +A++A +I  A A+ +  A   D     S+E
Sbjct: 258 GVLERAAKYSKERVTFGHPICENQAIAFKLAEMATEIEVARAMLYNTARMSDNGVPFSKE 317

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A   ++       +C +M   V    ++ +GG G   E  + R YR++   +I  G+   
Sbjct: 318 ATMCKM-------FCSEMCVRVCDMGLQIMGGYGLCNEYEVERFYRDAKLLTIGEGTSEI 370

Query: 450 MVLDVLNLLEK 460
             + V   + K
Sbjct: 371 CRMVVGRHVLK 381


>gi|118618686|ref|YP_907018.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99]
 gi|118570796|gb|ABL05547.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99]
          Length = 386

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/388 (20%), Positives = 147/388 (37%), Gaps = 31/388 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEP---VVRKQAHKIRAARLYLMAQLE 147
           ++ +  F P  H L R S    L  H +++   +E    V R    +        MA  E
Sbjct: 6   KYQRTLFEPE-HDLFRESYRGFLERHVALYHDEWEKAKIVDRGVWLEAGKQGFLGMAVPE 64

Query: 148 AGHLMS-PSVTSASMVALMTTP------------RVHKDWAPKIFSREYDPTNKAPMQKT 194
                  P     +++   T+              +   +   + + E            
Sbjct: 65  EYGGGGNPDFRYNTIITEETSAGRYSGIGFGLHNEIVAPYLLALATEEQKQRRLPKFCTG 124

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
                + +TE   G+D+  I ++  K  D  Y L+G K F+++ + +D  I++AQ +   
Sbjct: 125 EFITAIAMTEPGTGSDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEK 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM 312
           G      L+ +    G    R  +KIG  +  T EL FS+    +   L     G +  M
Sbjct: 184 GAQGFSLLVVERGMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLM 243

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + L    +  AIM+ +GM   L + + Y + R   G  + +    +  +A++A +     
Sbjct: 244 QNLPQERISIAIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELATEATMVR 303

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +         + K  +E+AA A+        +  +   ++    ++  GG GY+ E  +
Sbjct: 304 IMVDESIELHLDGKLTAEQAAMAKW-------YSTEKQVSLNDRCLQLHGGYGYMREYPV 356

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           AR Y +S   +I  G+   M   +   L
Sbjct: 357 ARAYLDSRVQTIYGGTTEIMKEIIGRSL 384


>gi|114767660|ref|ZP_01446370.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114540328|gb|EAU43422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601]
          Length = 566

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/509 (19%), Positives = 180/509 (35%), Gaps = 53/509 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK---VEFHPAWHALLRRSIH 112
           +        ++S    E  RM +     L   G       +   V     +    +    
Sbjct: 27  ERFAEASPDMVSAVLTEAGRMCDEVMAPLQRNGDLHPAVLENGVVRSSKGYDEGYKAIAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      D     +            +   A L        +      +    +  +  
Sbjct: 87  GGWVAITADPEHGGMGLPLTVATAVNEMMSGACLSLQLNPLLTQGQIEALEHHASDEMKA 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K
Sbjct: 147 LYLPKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAITGQK 193

Query: 233 WFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            ++S   SD       ++LA++         +  F+VP+ L D     G  N L    L+
Sbjct: 194 IYISWGDSDLVENVCHLVLARLPDAAPGTKGISLFMVPKFLPDEAGNPGVANTLKVVSLE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   + T  + +    G+++G+       +  M     L      V     +   A+
Sbjct: 254 HKMGLHGSPTCVMSYEGATGWIVGEPGGGMKAMFTMMNNARLGVGGQGVGAAEGAYQHAL 313

Query: 337 HYARRRHVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAA 391
            +A  R         +I    ++R +A +  +I AA A++   A S D  ++    E  A
Sbjct: 314 AFANERKQGKNPHDTIIGHADVRRMLATMKAEILAARAIALDCAVSIDMGRATGAPEWTA 373

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  + PI K +   +   V    ++  GG GY+EE   A+ YR+    +I  G+     
Sbjct: 374 RAAFLTPIAKAFGTDIGCEVSEMGVQVHGGMGYVEESGAAQFYRDVRVTAIYEGTNGIQA 433

Query: 452 LDVL-NLLEKGTNLFEQLFSTLEQ----------DLGSSGKKVITILRDSISLCKEDKGL 500
           +D++   L  G     +L   +E           +L  +  +    LR++          
Sbjct: 434 MDMVGRKLMDGGEAATRLLDEIEAEAEAAKGTMPELAGAVWEAAETLRETTEWLVAQAMP 493

Query: 501 ARFLTEKIALASSAAAL-----YRAGMND 524
           ARF T    L + A  L      RA M D
Sbjct: 494 ARFGTAVPYLRAFARVLGGHYHLRAAMAD 522


>gi|320449278|ref|YP_004201374.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus
           SA-01]
 gi|320149447|gb|ADW20825.1| acyl-coa dehydrogenase, short-chain specific [Thermus scotoductus
           SA-01]
          Length = 372

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 132/378 (34%), Gaps = 35/378 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P    +D+   +P W  L   +   G         +  V        +    +       
Sbjct: 24  PLAPEYDRTGEYP-WPQLKALA-ELGFLGMTTPEEWGGVGLDSVTWALALEEIAAADPSV 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L   S     M+    T    + +   +   E+                  LTE + 
Sbjct: 82  AVVLSVTSGLPQYMLLRFGTEAQKRKYLVPLARGEW-------------IGAFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A+I ++ +++  G        W  S+  +  ++++A+     G   +   L +   
Sbjct: 129 GSDAASIRTEARRVPGGFVLNGLKSWITSAGQAHLYVVMAR-----GEKGISAFLVEKDT 183

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL +   + K+G  +  T E+     F      L      +     L  LDS  + V+ 
Sbjct: 184 PGLSFGPPEAKMGLHAAHTAEVRLEGVFVPEENLLGEEGRGLAYA--LAGLDSGRVGVAA 241

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A      A  YA  R   G  L +   +   IAD+ + IAAA AL    A   D 
Sbjct: 242 QAVGIARGAFEIAKAYADEREQFGRKLREHQAIAFKIADMHVKIAAARALVLEAARKKDS 301

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + E       A   K +   +A  V  EA++ +GG GY  +  + R+YR++    I
Sbjct: 302 GERFTLE-------ASTAKLFASSVAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEI 354

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 355 YEGTSEIQRHIIARELYR 372


>gi|167628208|ref|YP_001678707.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
 gi|167590948|gb|ABZ82696.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1]
          Length = 581

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/461 (19%), Positives = 171/461 (37%), Gaps = 68/461 (14%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQLEAGHLMSPSV 156
            +LL+ +   GL  +    +++ V   +        H  R     L      G    P  
Sbjct: 61  RSLLKEAGEIGLLAADIPEAYDGVALDKISSTLITEHMARGGSFGLSHGAHVGIGTLP-- 118

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +         + + P + S E                   LTE   G+D     +
Sbjct: 119 -----IVFFGNEEQKQRYLPALGSGE-------------KIAAYCLTEPGSGSDALGAKT 160

Query: 217 QGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           +  +  DG  Y L+G K ++++   +D FI+ A+V+G          + D    GL    
Sbjct: 161 KAIRSEDGRHYILNGTKQYITNAGFADVFIVYAKVDGDK----FTAFIVDRDTPGLSIGP 216

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            + K+G + ++T  +   +       LLG++        ++  +         +   + +
Sbjct: 217 EEKKMGIKGSSTCPVILEDAKVPAKNLLGEIGKGHHIAFNILNIGRFKLGAGCIGSAKWA 276

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--- 388
           L  +  YA  R      +   P+++  IA++A+++  A ++ +R A   ++A    E   
Sbjct: 277 LHLSAKYANARVQFNSPIAHFPLIQEKIANMAIELYGAESVIYRTAGLIEKALEVKEPLQ 336

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A   +   I K    +M   V  E ++  GG GY +E  I R YR++  N I  G+  
Sbjct: 337 ATAEYAVECSICKILASEMLDLVADEGVQIHGGYGYTQEYEIERIYRDARINRIFEGTNE 396

Query: 449 AMVLDV------------LNLLEKGTNLFEQLFS-----------TLEQDLGSSGKKVIT 485
              L +            + LL     L  +LFS            +E+DL    KK++ 
Sbjct: 397 INRLLIPDTLLKRAMKGEIPLLAAAQRLQSELFSLGIHADNGMPLNIEEDLIERSKKIVL 456

Query: 486 -----ILRDSISLCKEDKGLARFLTEK-IALASSAAALYRA 520
                 ++       +++ L R + +  IA+ +  +AL RA
Sbjct: 457 FVAGIAVQKYQKALAQEQELLRNIADLVIAVFAMESALLRA 497


>gi|325919178|ref|ZP_08181233.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325550348|gb|EGD21147.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 597

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 93/527 (17%), Positives = 178/527 (33%), Gaps = 69/527 (13%)

Query: 30  LFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
                     D L   AL A                ++    +E  R  +     L++  
Sbjct: 7   PLTDFRFALHDVLGAQALFARLGYTDAST------DIIDAVLEEAGRFTSQVLAPLNSIG 60

Query: 88  GPGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              G  +DK    V   P + A   + +  G +    +  F          +  + +   
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYNQFVEGGWNGLTAETQFGGQGMPHTLGVPLSEMINA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L  G+    S  +   +           +   +    +  T             + LT
Sbjct: 121 ANLAWGNFPLLSHGAMEALRQHGESWQQDVFLKPLIDGRWTGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         
Sbjct: 168 EPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKG 227

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F+ P+   D     G  N L    +++K+G + + T  + F    G+L+G  +    
Sbjct: 228 ISLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQ 287

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  M     L   +  +     +   A+ Y R R  S               +I  P +
Sbjct: 288 AMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPDKPADPIIVHPDV 347

Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +R +  I      +  L+   A+  D        + R++       + PI+K    + + 
Sbjct: 348 RRMLLTIKSLTEGSRLLALHAASLVDVTHRGETEQERADAETLVSFLTPISKACQTEWSI 407

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-----LEKGTNL 464
                A++C GG GYI E  + +  R++   +I  G+     LD++          G  L
Sbjct: 408 ENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTATSQAAGLKL 467

Query: 465 FEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           F     T    Q   ++  + I  LRD      E   L R + ++ A
Sbjct: 468 FLADVETFANAQQGNAALAEFIKPLRD---KASEWAMLTRDVLDRAA 511


>gi|17569725|ref|NP_510788.1| Acyl CoA DeHydrogenase family member (acdh-10) [Caenorhabditis
           elegans]
 gi|2833314|sp|Q22347|ACADM_CAEEL RecName: Full=Probable medium-chain specific acyl-CoA dehydrogenase
           10, mitochondrial; Short=MCAD; Flags: Precursor
 gi|1125771|gb|AAB52493.1| Hypothetical protein T08G2.3 [Caenorhabditis elegans]
          Length = 417

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P    ++R++   GL        +                        
Sbjct: 52  PNAAKFDESGEFP--WEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGI 109

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V +       K +                +    +     +TE   G
Sbjct: 110 QLGIMGPSLAIAPVYISGNEEQKKKYL-------------GALAAEPIIASYCVTEPGAG 156

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++ +K  D         W      +  F +LA+ +              + DG
Sbjct: 157 SDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDG 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------LIYLD 319
              G+   + +  +G R + T  + F +         NV   P    K+      +    
Sbjct: 217 DTPGITRGKKEKNMGQRCSDTRVITFEDVRVPA---ENVLGAPGAGFKVAMEAFDMTRPG 273

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++      L E+  YA  R   G ++ +   ++  +AD+A+++  A  ++++ AN 
Sbjct: 274 VAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAVNLELARLITYKSAND 333

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A      A++  GG+G+  E  + +  R++  
Sbjct: 334 VDNKVRSS-------YNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKI 386

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  +L
Sbjct: 387 YQIYEGTSQIQRIVISRML 405


>gi|18028283|gb|AAL56011.1|AF327351_1 very-long-chain acyl-CoA dehydrogenase VLCAD [Homo sapiens]
          Length = 621

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/483 (17%), Positives = 165/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 190 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPV---ENILGEVGDGFKVAMNILNSGRF 305

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +   L          YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++E ++ +GG GY  +    R  R++ 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEVLQILGGLGYTRDYPYERILRDTR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L+Q  + +    V   LRDS+    +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G   + +  +  R  +   + 
Sbjct: 481 LGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|145225519|ref|YP_001136197.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315445872|ref|YP_004078751.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145218005|gb|ABP47409.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315264175|gb|ADU00917.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 380

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 137/402 (34%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + +  A++L  +A     ++    P  +R +K E +P    +       GL    +  
Sbjct: 5   RLLPTDDARDLVELARQIADKV--LDPIVDRHEKDETYPEG--VFATLGEAGLLSLPYPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S   +    +    + W P +    
Sbjct: 61  EWGGGGQPYEVYLQVLEELAARWAAVAVAVSVHSLSCHPLMSFGSDEQRQRWLPDMLGG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       S      L+E + G+D AA+T +   +  G        W     ++D 
Sbjct: 120 ------------STIGAYSLSEPQAGSDAAALTCRATAVDGGYRITGSKAWITHGGIADF 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + + A+     G   +   L      GL + + + K+G  +  T    + +        +
Sbjct: 168 YNLFART--GEGSQGISCFLVPRDTEGLTFGKPEEKMGLHAVPTTAAHYDDANLDSDRRI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++V   + +L EA+ Y++ R   G  +ID   +   +
Sbjct: 226 GTEGQGLQIAFSALDSGRLGIAAVAVGLAQAALDEAVAYSQERTTFGRKIIDHQGLAFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + +A A     A   D     S         A + K      A  V  +A++ +
Sbjct: 286 ADMAAAVDSARATYLDAARRRDAGLPYSR-------HASVAKLVATDAAMKVTTDAVQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG+GY  +  + R+ RE+    I  G+     L +   L +G
Sbjct: 339 GGAGYTRDYRVERYMREAKITQIFEGTNQIQRLVISRHLTRG 380


>gi|119610656|gb|EAW90250.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_e [Homo
           sapiens]
 gi|193786335|dbj|BAG51618.1| unnamed protein product [Homo sapiens]
          Length = 579

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 113 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 159

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 160 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 219

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 220 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 276

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 277 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 331

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 332 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 390

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 391 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 449

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 450 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 503


>gi|114764710|ref|ZP_01443895.1| isovaleryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542910|gb|EAU45931.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 387

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 138/401 (34%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D     P  + L       GL        F  
Sbjct: 9   DLGEDVNALREMVHRWAQDRVKPMAAEVDASNAFP--NDLWTEMGELGLLGITVPEEFGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  +      + P + S ++  
Sbjct: 67  AGMGYLAHVIAVEEIARASASVSLSYGAHSNLCVNQIKLNGSAEQKAKYLPGLVSGQH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEPGAGSDVVSMKLRAEKKNDRFVLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPEAGSKGITAFLIEKSMTGFTTSPHFDKLGMRGSNTAELIFDDVEVPFENILGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GKGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYMAERKQFGQPIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G++ +  +AR +R++    I  G+     + V   L     
Sbjct: 347 GFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMAAMG 387


>gi|84515814|ref|ZP_01003175.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84510256|gb|EAQ06712.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 568

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/434 (19%), Positives = 165/434 (38%), Gaps = 36/434 (8%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    R     G            +            +   A L        + 
Sbjct: 71  VRTPPGFPDGYRAIATGGWIGMSAATEHGGMGLPMTLTTIVNEMMSGACLALQLNPLMTQ 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ +
Sbjct: 131 GQIEALEHHASDAIKSVYLPKLISGEWCGT-------------MNLTEPQAGSDVGALRT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED- 264
           + +   DG Y ++G K ++S   +D       ++LA++ G       +  F+VP+L+ D 
Sbjct: 178 KAEPNGDGTYAITGQKIYISWADNDFTANVCHLVLARLPGANPGTKGISLFMVPKLIPDA 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    L++K+G   + T  +E++   G+L+G  +     +  M     L  
Sbjct: 238 DGNPGRKNDLRVVSLEHKMGLHGSPTAVMEYAGATGWLVGPEHGGMAAMFTMMNNARLGV 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSG----GILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  +     +L  A+ YA+ R        G +I+   ++R +  +  DI AA A++   
Sbjct: 298 GMQGIGTAERALQHALAYAQDRKQGRADGTGAIIEHADVRRMLTTMRADIYAARAIALMN 357

Query: 377 ANSFDEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           A + D A +  + A  A A  + PITK +   +        ++  GG G+IEE   A+  
Sbjct: 358 AVAIDMATATHDPAWTARAAFLTPITKAFGTDVGVEATNTGVQIHGGMGFIEETGAAQFV 417

Query: 435 RESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           R+   ++I  G+     +D V   L  G +   +L   + +   ++      +       
Sbjct: 418 RDVRVSTIYEGTNGIQAMDLVARKLMDGGDAAFRLLDDVVRGAEAAKATHPDLAHAVWEA 477

Query: 494 CKEDKGLARFLTEK 507
            +  +    +L  +
Sbjct: 478 AETLREATEWLVGR 491


>gi|307169804|gb|EFN62341.1| Probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Camponotus floridanus]
          Length = 378

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 137/401 (34%), Gaps = 44/401 (10%)

Query: 70  AQELARMANYNT--PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            Q+LAR        P    Y   G+  WD +          +++   GL      +    
Sbjct: 1   MQDLARKFVKEEIIPVAAEYDRTGKYPWDVI----------KKAWSLGLLNKHIPQHCGG 50

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +             +          +  S    + V +  T    K +  ++        
Sbjct: 51  LESGNFDGCLVTEEFAYGCTGITTAIDASSLGQTPVIIAGTKEQQKKYLGRLV------- 103

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K            W  +  +++ + +L
Sbjct: 104 ------EEPLVAAYCVTEPGAGSDVAGIKTKAVKKGKEWIINGTKMWITNGGVANWYFVL 157

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+                + +   +GL   R +  +G R++ T  + F +       + N
Sbjct: 158 AKTNPDPKASASKAFTGFIVERDSDGLTPGRKEMNMGQRASDTRMVTFEDVRVP---EEN 214

Query: 304 VSTGPVEDMKILI-YLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G  +  KI +   D    +V        + +L EA  YA  R      + +   +  
Sbjct: 215 VLLGEGQGFKIAMKTFDRTRAAVAAAAVGLAQRALDEATKYALERKTFDRPIAEHQAVAF 274

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+ +  +     + A + D      +E + A ++A I K +   +A     +A++
Sbjct: 275 ILADMAIGVETSRMSWMKAAWAAD------KELSNATMLASIAKCYAADVANKCTTDAVQ 328

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G+  E  + +  R++    I  G+     L +   L
Sbjct: 329 IFGGAGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRAL 369


>gi|222833226|gb|EEE71703.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 133/381 (34%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+  A+   G + D+            ++  +GL C      +        H        
Sbjct: 16  PKQGAWDKAG-KVDR--------ETWLKAGREGLLCVTLPTEYGGGGGDFGHSAVFNEEL 66

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               +        S   A  +A +      + W PK+ S E               + +G
Sbjct: 67  ARVGVSGLGFGVHSDIIAPYIARIANEEQKQRWLPKVCSGE-------------AILAIG 113

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ A+ +   +  D  Y ++G K F+S+ +  D  IM+ + +   G   V  
Sbjct: 114 MTEPGTGSDLKAVRTTAIRDGDE-YVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSL 172

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R   K+G  +  T EL F N       LLG+       +        
Sbjct: 173 IMVEADREGFRRGRKLEKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGELPQER 232

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ + + +   L   I Y + R      + D    K  +ADI     A   +     
Sbjct: 233 LSIAVSAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYL 292

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +     +   EEAA       I K +  +     + E ++  GG GY+ E  +AR + +S
Sbjct: 293 SEHIRRRLSLEEAA-------IAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADS 345

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M   +   L
Sbjct: 346 RVTRIYGGTSEVMRDLISRKL 366


>gi|170750182|ref|YP_001756442.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656704|gb|ACB25759.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 381

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 128/385 (33%), Gaps = 31/385 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ +  P     LR +   G+               +             
Sbjct: 22  EHIAPHALDWDRDKTFPV--ETLRAAAALGMAGIYVREDVGGSGLSRLDATLIFEALSAG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+         + W P +   E                   LTE
Sbjct: 80  CPTVAAFLSIHNMCAWMIDAYGDDDQRRRWLPSLMGME-------------RIASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++ ++  D  Y LSG K F+S   +    +     G  G   +  ++ +
Sbjct: 127 PGSGSDAAALRTRAERDGDH-YVLSGEKQFISGAGASDLYVCMVRTGEAGPSGISAIVVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
               GL +   + K+G  +  T  + F      +    N      +  KI +       L
Sbjct: 186 KGTPGLSFGADERKMGWNAQPTRAVRFDGCRVPVG---NRLGAEGQGFKIAMSGLDGGRL 242

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  S+ G + +L +A+ Y   R   G  L D   ++  +AD+A  +  +       A 
Sbjct: 243 NIAACSLGGAQAALDKALAYMGDRRAFGARLTDFQALQFRLADMATSLEVSRTFLRHAAA 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D           A  +  + K      A  V  +A++  GG GY+ E  + +  R+  
Sbjct: 303 ALDAKDPS------ATQLCAMAKRHVTDAAFEVANQALQLHGGYGYLAEYGVEKIVRDLR 356

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN 463
            + IL G+   M L +   L  G  
Sbjct: 357 VHQILEGTNEIMRLIIARGLTGGRR 381


>gi|58581642|ref|YP_200658.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188577120|ref|YP_001914049.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58426236|gb|AAW75273.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521572|gb|ACD59517.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 597

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/525 (17%), Positives = 176/525 (33%), Gaps = 67/525 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                     D L    +                 ++    +E  R        L++   
Sbjct: 7   PLTDFRFALHDVLDADALFARLGYADAS-----ADIIDAVLEEAGRFTAQVLAPLNSVGD 61

Query: 89  PGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             G  +DK    V   P + A   + +  G +    +  F          +  + +   A
Sbjct: 62  EIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L  G     S  +   +           +   +    +  T             + LTE
Sbjct: 122 NLAWGTFPLLSHGAMEALRQHGEAWQQDVFLTPLIDGRWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         +
Sbjct: 169 PHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGI 228

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G  +     
Sbjct: 229 SLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQPHKGLQA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   +  +     +   A+ Y R R  S               +I  P ++
Sbjct: 289 MFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPADPIIVHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPA 410
           R +  I      +  LS   A+  D A        R++       + PI+K    + +  
Sbjct: 349 RMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPISKACQTEWSVE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-----LEKGTNLF 465
               A++C GG GYI E  + +  R++   +I  G+     LD++          G  LF
Sbjct: 409 NTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTATSQAAGLKLF 468

Query: 466 EQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
                T    QD  ++  + I  LRD    C E   L R + ++ 
Sbjct: 469 LTDVDTFANAQDGNAALAEFIKPLRD---KCSEWAMLTRDVLDRA 510


>gi|94313946|ref|YP_587155.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357798|gb|ABF11886.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus
           metallidurans CH34]
          Length = 379

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 133/381 (34%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+  A+   G + D+            ++  +GL C      +        H        
Sbjct: 29  PKQGAWDKAG-KVDR--------ETWLKAGREGLLCVTLPTEYGGGGGDFGHSAVFNEEL 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               +        S   A  +A +      + W PK+ S E               + +G
Sbjct: 80  ARVGVSGLGFGVHSDIIAPYIARIANEEQKQRWLPKVCSGE-------------AILAIG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ A+ +   +  D  Y ++G K F+S+ +  D  IM+ + +   G   V  
Sbjct: 127 MTEPGTGSDLKAVRTTAIRDGDE-YVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R   K+G  +  T EL F N       LLG+       +        
Sbjct: 186 IMVEADREGFRRGRKLEKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGELPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ + + +   L   I Y + R      + D    K  +ADI     A   +     
Sbjct: 246 LSIAVSAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYL 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +     +   EEAA       I K +  +     + E ++  GG GY+ E  +AR + +S
Sbjct: 306 SEHIRRRLSLEEAA-------IAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADS 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M   +   L
Sbjct: 359 RVTRIYGGTSEVMRDLISRKL 379


>gi|326566643|gb|EGE16784.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis 12P80B1]
          Length = 559

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/500 (16%), Positives = 178/500 (35%), Gaps = 61/500 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSI 111
           L    E         L   A++    +      G+          V     +     +  
Sbjct: 27  LSAYAELDTDTINSYLEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEAYAQYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPR 169
             G      +  F  +    +  + +A   +M        M P ++  ++  +    T  
Sbjct: 87  ELGFPAINAEPEFGGLGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGTEV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+ +  +  T             + LTE   G+D+  I ++     DG Y ++
Sbjct: 145 QKATYLEKMNTGAWSGT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAIT 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+S+   D       I+LA++         +  F+VP+ + +     G  N +   
Sbjct: 192 GQKIFISAGEHDLTENIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G +++AT  + F +  G+L+G  N     +     +  L +AI  ++   ++  
Sbjct: 252 SIEHKMGIKASATCVMNFDHAKGYLIGPKNRGLNAMFTFVNVARLGTAIQGLAASELAFQ 311

Query: 334 EAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRL---AN 378
            ++ YA+ R              S   +I  P ++  +           AL + L   A+
Sbjct: 312 GSLTYAKERTAMRALSGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSDFAD 371

Query: 379 SFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + ++ SE         ++ PI K +  +         ++  GG GYI E  + ++ R
Sbjct: 372 TVAKGENPSEVKFADEMLSLLTPIAKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++  + +  G+     LD+L     G    +       + Q    +       +   +S 
Sbjct: 432 DTRISCLYEGTTEIQALDLLGRKVLGSQGRMLANFTQIIHQFCQENADN--DEVGQMVST 489

Query: 494 CKEDKGLARFLTEKIALASS 513
             +     R LT +IA+ S+
Sbjct: 490 LAKLNQQWRDLTSRIAMQST 509


>gi|327190780|gb|EGE57849.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 598

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/495 (19%), Positives = 169/495 (34%), Gaps = 75/495 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E  ++A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAGKVAEE 51

Query: 80  N-TPQLHAYGPGG-ERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
              P  ++    G  R D   V     +    +     G         F        + +
Sbjct: 52  ALFPVNYSGDQEGCHRHDDASVSTPKGFREAYKAYREGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ A+    T    + + PK+    +  T       
Sbjct: 110 HCAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKQTYLPKMVDGSWSGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y +SG K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L       G+ N +    +++K+G   NAT  + +    GF
Sbjct: 217 IEGAPEGTKGISLFIVPKFLVGEDGAPGTRNAVSCGAIEHKMGIHGNATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A  YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAAAYARDRIQGRALSGVKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R +  I     A  A     A   D A   ++E           ++ PI
Sbjct: 337 ADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTL 472
              G      LF  +
Sbjct: 457 ALNGGRAAMALFKEI 471


>gi|260462349|ref|ZP_05810557.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031843|gb|EEW33111.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 387

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 135/365 (36%), Gaps = 26/365 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA   L R     GL     D  F        AH I    +   +   
Sbjct: 31  PIAGDIDRQNEFPAH--LWREFGALGLLGITADPDFGGSGMGYLAHVIAVEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP   + + P + S E                 L ++E   
Sbjct: 89  GLSYGAHSNLCVNQINRWATPAQKEKFLPPLCSGE-------------RVGALAMSESGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +D         W  + P ++  ++ A+ +       +   + + + 
Sbjct: 136 GSDVVSLKLRAEKRNDRYVLNGTKMWITNGPDAETLVVYAKTDPERKSRGITAFIVEKAM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K+G R + T EL F +        L+     VE +   +  +  +++   
Sbjct: 196 AGFSVAQKLDKLGMRGSNTGELVFEDVEVPFDNVLHEEGRGVEVLMSGLDYERTVLAGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L  AI Y   R   G  + +  +++  +AD+   + AA A  + +A + D  +
Sbjct: 256 IGLMAACLDVAIPYVHERKQFGQAIGEFQLVQGKLADMYTTMNAARAYVYAVAAACDRGQ 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA           +  + A  +  +A++ +GG+GYI +    R  R++    I  
Sbjct: 316 TTRKDAAG-------CVLFAAEKATQMALDALQLLGGNGYINDYPTGRLLRDAKLYEIGA 368

Query: 445 GSGNA 449
           G+   
Sbjct: 369 GTSEI 373


>gi|193645728|ref|XP_001943671.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Acyrthosiphon pisum]
 gi|328707014|ref|XP_001951793.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 417

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 125/381 (32%), Gaps = 25/381 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P     DK                 GL        +E        H I    +   
Sbjct: 54  REIAPKAAEIDKTNTFNDLRKCWLELGSLGLLGITIPTEYEGTGGSYTDHVIATEEISRA 113

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + +    + + L  T      + P++   E                 L ++
Sbjct: 114 SGSVGLSYAANTNLCMNQIRLNGTQEQKAKYLPRLCRGE-------------AVGALAMS 160

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLL 262
           E   G+D+ ++  + ++            W  + P +D  ++ A+          +   +
Sbjct: 161 EHGSGSDVVSMKLKAERKGSHYILNGSKFWITNGPDADVLVVYARTNPDAKKQHGITAFI 220

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            + +  G    +  +K+G R + T EL F +    +   L      V  +   + L+  +
Sbjct: 221 IEKTYEGFTTGQKLDKLGMRGSNTCELIFQDCKVPVENVLGEENKGVYVLMSGLDLERMV 280

Query: 323 MS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +S   V  M+        Y   R      + +  +++  IAD+   ++A     + ++ +
Sbjct: 281 LSGGPVGLMQACADLTFDYVHSRQQFNTKIGEFQLIQAKIADMYTTLSATRNYLYNISRA 340

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+    S++             +  + A  +  + ++C+GG+GYI + +  R  R++  
Sbjct: 341 CDKGHVCSKD-------CAGVILFSAENAVKMALDTIQCLGGNGYINDYASGRLLRDAKL 393

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     L +   L K
Sbjct: 394 YEIGAGTSEIRRLIIGRSLNK 414


>gi|114800213|ref|YP_759397.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114740387|gb|ABI78512.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 594

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/485 (17%), Positives = 175/485 (36%), Gaps = 63/485 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V+    +    ++ + +G                  H +  A   +++       M P +
Sbjct: 73  VKTPDGFPDAYKQLVENGWPLLSAHPEMGGQGLP--HAVNIAWTEMVSSSNMAFGMYPGL 130

Query: 157 TSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  +  ALM   +  +   + PK+ S E+  T             + LTE   GTD+  +
Sbjct: 131 THGAYQALMAGGSDELKAKYGPKMASGEWAGT-------------MNLTEPHCGTDLGLM 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++     DG Y ++G K ++S    D       ++LA++EG       +  F+VP+ + 
Sbjct: 178 KTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMV 237

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                 G  N      L+ K+G   NAT  + +    G+L+G+ +     +  M     L
Sbjct: 238 KEDGSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARL 297

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
              +  +S   ++   A+ +A+ R                  +I  P ++R + +    +
Sbjct: 298 GVGLQGMSQAEIAYQNALDFAKDRVQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFL 357

Query: 367 AAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             A A  + +A   D      +EA       Y  ++ P+ K +            ++  G
Sbjct: 358 EGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYLTHKGYESANLGLQVHG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478
           GSG+  E  + +  R+   + I  G+     LD++   L   G       F+ +++ +  
Sbjct: 418 GSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAE 477

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIAL--------ASSAAALYRAGMNDIADVFL 530
           + K  +  L   +   K  +   +  T  +          A +++  Y   M   A  F+
Sbjct: 478 NDK--VEGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFM 535

Query: 531 ENRFL 535
             R  
Sbjct: 536 WARMA 540


>gi|73984516|ref|XP_533725.2| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
           9 isoform 1 [Canis familiaris]
          Length = 621

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 90/483 (18%), Positives = 176/483 (36%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D+    P  +  L +  + GL        +  +        R   +  +    A  L
Sbjct: 85  ERIDREGKIP--NETLEKLKNLGLFGMQVPEEYGGLGLSNTMYARLGEIIGLDGSIAVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L         + P++ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGNKEQKAKYLPRLASGEH-------------IAAFCLTEPTSGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D   Y L+G K W  +  +++ F + A+      +G V    +  L+ +
Sbjct: 190 ASIKTRATLSEDKKHYILNGSKIWITNGGIANVFTVFAKTQVVDSDGSVKDK-ITALIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPIENVLGEVGGGFKVAMNI---LNSGRF 305

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  +        +     YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSLVAGMLKKLIEMTAAYACTRKQFNKNLSEFGLIQEKFALMAQKTYVMESMAYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+ +    R  R+S 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEGAWQCVSEALQVLGGSGYMRDYPYERLLRDSR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +     + L++ ++ +  + V   LRDS+S   +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTTRINELKRGNVTTVIETVSQRLRDSLSRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                +      ++A SA                 L R G   + +  +  R  +   + 
Sbjct: 481 LGLTGKLGAVHPSVADSANKLEENVYYFGRTVETLLLRFGKTIVEEQMVLKRVANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|325123539|gb|ADY83062.1| putative acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 387

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 140/377 (37%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +      
Sbjct: 29  PFVNEWDETETFP--RELYKKAAEIGLLGLGFSGEYGGIPDADPFYSLLAGVEMAKAGSG 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P+I S E                 L +TE  
Sbjct: 87  GVHISLMVHTIGAPPIQHFGSEELKSKVLPRIISGE-------------KISALAITEPG 133

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 134 GGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLVD 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 193 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFLG 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    
Sbjct: 252 VVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMT 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K +  E         + K    +        A++ +GG G++      R YRE   N 
Sbjct: 312 QQKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 369 IGGGAEEIMKDLISKQL 385


>gi|289706031|ref|ZP_06502404.1| putative acyl-CoA dehydrogenase [Micrococcus luteus SK58]
 gi|289557233|gb|EFD50551.1| putative acyl-CoA dehydrogenase [Micrococcus luteus SK58]
          Length = 377

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 130/374 (34%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  +  P    +L  +   GL              ++   I        A    
Sbjct: 25  PHALDWDAEKHFPV--DVLAEAGELGLGGIYVGEEHGGTGLERTDAILIFEELAKADPAF 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +      W P +                +      LTE   G
Sbjct: 83  AAYISIHNMVAWMIDSFGSDEQRARWIPDLVGM-------------AHLASYCLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L+G K F+S   + D ++++ +     G   +  ++     
Sbjct: 130 SDAAALKTRAVRDGDH-YVLNGVKQFISGAGASDCYVVMCRT-ADTGARGISAVVVHKDT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G  +  T ++ F +    +   LG+                L+    S
Sbjct: 188 PGLSFGPNEKKMGWHTQPTRQVIFEDVRVPVADRLGEEGDGFRIAMKGLNGGRLNIGACS 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G   +L +A  Y + R   G  L  +  +   +AD+++ +  A  +  R A++ D   
Sbjct: 248 IGGGLAALDKATRYLKERSAFGEPLATKQALVFELADMSVKLETAHTMLMRAADALDRND 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +        +  + K    +        A++  GG GY+ E  + +  R+   + IL 
Sbjct: 308 PDT------VRLCAMAKLVATESGYEAADTALQLHGGYGYLHEYGVEKLVRDLRVHRILE 361

Query: 445 GSGNAMVLDVLNLL 458
           GS   M + V   L
Sbjct: 362 GSNEIMRMIVGRGL 375


>gi|317470438|ref|ZP_07929826.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316901953|gb|EFV23879.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 380

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 135/365 (36%), Gaps = 33/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMV 162
            L ++    GL    + +            + A      + A +   + +S S+   S++
Sbjct: 40  DLYKKMGELGLIGLPYPKEVGGQGADYLSYVLAVEEISKVDASVGISYSVSTSLYGGSIM 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                     ++   + S ++                 GLTE   G+D     +  +K  
Sbjct: 100 NSDAPVEKKNEFLAPVLSGQHFG-------------SFGLTEPNAGSDAGGCVTVAEKDG 146

Query: 223 DGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y L+G K F  + P++D   + A  E       +   +      G    ++++K+G 
Sbjct: 147 DE-YILNGMKCFNTNGPLADYTAVYALTEPEKKAKGLSCFVVKKGTPGFSVGKVEDKMGI 205

Query: 282 RSNATVELEFSNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           RS    E+   N         +    G    MK    LD   + V+   + +AE     A
Sbjct: 206 RSAQVSEMILENVRVPAENMIVPSGDGFKLAMK---TLDGGRIGVAAQGLGIAEGAFEIA 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y + R   G  L     +   +A++ ++I AA  + ++ A    E +  S  AA A+ 
Sbjct: 263 KEYLKTREQFGKPLYRNQYLAFKMAELEMEIDAAKLMLYKAAADKQEGRRYSIPAAKAKY 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +       C + A  V  EA++ +GG+GY++   + R  R++    I  G+     L V 
Sbjct: 323 L-------CTEAAMHVTTEAVQMLGGNGYMKGYHVERMMRDAKITQIYEGTNEIQKLVVS 375

Query: 456 NLLEK 460
             + +
Sbjct: 376 GAIFR 380


>gi|89100684|ref|ZP_01173541.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89084630|gb|EAR63774.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 594

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/462 (17%), Positives = 163/462 (35%), Gaps = 46/462 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL  +     +  +   +      A     A   +    +     +  + L
Sbjct: 66  KLLKQAGDLGLLGADVPEEYGGLGLDKVSSALIAEKMSRAGGFSITHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + P + + E                   LTE   G+D     +  +  ++G
Sbjct: 126 FGDEEQKQKYLPLLATGE-------------KIAAYALTEPGSGSDALGAKTTAKLNAEG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+V+G          + +    G+     + K+G +
Sbjct: 173 THYVLNGEKQWITNAGFADVFVVYAKVDGEH----FSAFIVEREYPGVSTGPEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +        L  +  G +    IL        + +V   + +    + Y 
Sbjct: 229 SSSTRTLILEDAQVPKENLLGELGKGHIIAFNILNIGRYKLGVGAVGASKRAYEVTVQYT 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--------- 390
            +R      +    + K  +A++A  + AA +  +R    F++  SR  E          
Sbjct: 289 NQRQQFKTPISQFNLTKEKLANMAAKLYAAESSVYRTVGLFEDRMSRLTEEEVKNGKEVA 348

Query: 391 ---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A   I   + K++  ++   +  E ++  GG G++ E  I R YR+S  N I  G+ 
Sbjct: 349 NSIAEYAIECSLNKFFATEVLDYIADEGVQLHGGYGFMAEYEIERIYRDSRINRIFEGTN 408

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL--- 504
                    LL  GT L +     L   L    + +   L   +     D+ LA+     
Sbjct: 409 EI-----NRLLVPGTYLRKAFKGEL--PLFQKAQALQEELMMLMPEEPGDEPLAQEKYLV 461

Query: 505 --TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              +KI L ++  A  + G     +  +     D   + + M
Sbjct: 462 KNAKKIGLLAAGLAAQKFGKAIEKEQEILVNIADIVSNAYAM 503


>gi|21219931|ref|NP_625710.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|6468707|emb|CAB61663.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 391

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 128/344 (37%), Gaps = 25/344 (7%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +D  F    +     ++       A+L  G  +S    ++  +A   T     +  P +
Sbjct: 63  PYDAEFGGGEQPYEVYLQVLEELAAARLTVGLGVSVHTLASYALATYGTKEQQAEHLPAM 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
                            +     L+E   G+D A++ ++  + S G + ++G K W    
Sbjct: 123 LGG-------------GLLGAYSLSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHG 169

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D + ++A+  G  G   +   L      GL     + K+G + + T +L        
Sbjct: 170 GIADFYTVMART-GEDGPRGITAFLVPADAEGLSAAVPEKKMGLKGSPTAQLHLDGVRVP 228

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LGD                L  A  ++   + +L EA+ YA  R   G  + D   
Sbjct: 229 DARRLGDEGQGFAIALSALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQG 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+A  I A  AL    A   D     +++AA A       K  C   A  V  +
Sbjct: 289 LRFMLADMATQIEAGRALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTHD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++ +GG GY  +    R+ RE+    I+ G+     + +   L
Sbjct: 342 AVQILGGYGYTADFPAERYMREAKVLQIVEGTNQIQRMVIARHL 385


>gi|172058359|ref|YP_001814819.1| acyl-CoA dehydrogenase domain-containing protein [Exiguobacterium
           sibiricum 255-15]
 gi|171990880|gb|ACB61802.1| acyl-CoA dehydrogenase domain protein [Exiguobacterium sibiricum
           255-15]
          Length = 594

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/472 (18%), Positives = 166/472 (35%), Gaps = 68/472 (14%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           +   P L       +R +K EF      LLR +   GL  +    ++      +      
Sbjct: 47  DRVVPVL-------DRIEKHEF-ELSVGLLREAGELGLLGADVPEAYGGYQMDKISSSII 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              +   +  A    +     +  +           + PK+ S E+              
Sbjct: 99  TEKFARGRSFALSYGAHVGIGSLPIVFFGNEEQKHKYLPKLSSGEW-------------I 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +       G  Y L+G K W  ++  +  F++ A+++G    
Sbjct: 146 ASYALTEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNAGFASLFVVYAKIDGDK-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 L +GS  G+     + K+G + ++T  L   +    +   L  +  G V    I
Sbjct: 204 --FTAFLVEGSYPGVSTGLEEQKMGIKGSSTRTLILEDAEVPVDNVLGEIGRGHVIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L       A+ +V   + ++  A+ Y+  R      +   P+++  +A +A    A  + 
Sbjct: 262 LNVGRYKLAVGAVGSSKRAIDLAVQYSNERKQFKTPISSFPLIQEKLATMAAQTYAMESS 321

Query: 373 SFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F +             K  ++  A   I   + K +  +    VI EA++  G
Sbjct: 322 VYRTGGLFQDSLDQLSDEESKDGKKIADAIAEYAIECSMNKVFASETFDYVIDEAVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  +   YR+S  N I  G+     L V            L LL +   L  ++
Sbjct: 382 GYGFMAEYEVENMYRDSRINRIFEGTNEINRLLVPGTLLKKAMKGDLPLLAEAQRLQNEV 441

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
            S +  ++GS     +   R  +++ K           KI L ++  A+ + 
Sbjct: 442 MSFMPTEVGSEP---LDRERHLLAMMK-----------KIFLLTAGTAVQKY 479


>gi|167748723|ref|ZP_02420850.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662]
 gi|167651693|gb|EDR95822.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662]
          Length = 380

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 136/365 (37%), Gaps = 33/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMV 162
            L ++    GL    + +            + A      + A +   + +S S+   S++
Sbjct: 40  DLYKKMGDLGLIGLPYPKEVGGQGADYLSYVLAVEEVSKVDASVGISYSVSTSLYGGSIM 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                     ++   + S ++                 GLTE   G+D     +  ++  
Sbjct: 100 NSDAPVEKKNEFLAPVLSGQHFG-------------SFGLTEPNAGSDAGGCVTVAERDG 146

Query: 223 DGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y L+G K F  + P++D   + A  E       +   +      G    ++++K+G 
Sbjct: 147 DE-YILNGMKCFNTNGPLADYTAVYALTEPEKKAKGLSCFVVKKGTPGFSVGKVEDKMGI 205

Query: 282 RSNATVELEFSNTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           RS    E+   N         +    G    MK    LD   + V+   + +AE     A
Sbjct: 206 RSAQVSEMILENVRVPAENMIVPSGDGFKLAMK---TLDGGRIGVAAQGLGIAEGAFEIA 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y + R   G  L     +   +A++ ++I AA  + ++ A    E +S S  AA A+ 
Sbjct: 263 KEYLKTREQFGKPLYRNQYLAFKMAELEMEIDAAKLMLYKAATDKQEGRSYSIPAAKAKY 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +       C + A  V  EA++ +GG+GY++   + R  R++    I  G+     L V 
Sbjct: 323 L-------CTEAAMHVTTEAVQMLGGNGYMKGYHVERMMRDAKITQIYEGTNEIQKLVVS 375

Query: 456 NLLEK 460
             + +
Sbjct: 376 GAIFR 380


>gi|308175013|ref|YP_003921718.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM 7]
 gi|307607877|emb|CBI44248.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens DSM 7]
          Length = 594

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 164/459 (35%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LLR++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDEIENHQFEHSVRLLRKAGDLGLLGADVPEEYGGIGLDKISSAFITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    T    K + P + S                     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGTEEQKKTYLPDLASG-------------QRIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + + +  G
Sbjct: 160 LGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKNYPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  +  YA +R      +    + +  +A ++  + A  +  +R    F++  SR
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPISSFTLTQEKLATMSARLYAMESSVYRTVGLFEDNMSR 335

Query: 387 -SEEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +EEA           A   I   + K    +    +  E ++  GG G+++E  + R Y
Sbjct: 336 LTEEAQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK   L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKALQEELMMLMPEEPGSEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                       +++K + R   +KIAL ++  A  + G
Sbjct: 454 -----------LEQEKYIVRQ-AKKIALLTAGLAAQKYG 480


>gi|169794659|ref|YP_001712452.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AYE]
 gi|169147586|emb|CAM85447.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AYE]
          Length = 407

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 139/378 (36%), Gaps = 27/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
            P    WD+ E  P    L +++   GL    +   +  +          A + +     
Sbjct: 48  TPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGS 105

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +      A  +    +  +     P I S E                 L +TE 
Sbjct: 106 GGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGE-------------KISALAITEP 152

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLE 263
            GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL 
Sbjct: 153 GGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLI 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G+    LK K+G  ++ T  L F         LLG  N     + +   +     
Sbjct: 212 DAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNFNMERFFL 270

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A   
Sbjct: 271 GVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKM 330

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K +  E         + K    +        A++ +GG G++      R YRE   N
Sbjct: 331 TQLKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVN 387

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 388 MIGGGAEEIMKDLISKQL 405


>gi|126641422|ref|YP_001084406.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 338

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 128/354 (36%), Gaps = 21/354 (5%)

Query: 114 GLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +    +   AH I    +   +        + S    + +      +  +
Sbjct: 2   GLLGMTVSEEYGGANMGYLAHIIAMQEISRASAAIGLSYGAHSNLCVNQINRNGNEQQKQ 61

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S EY                L ++E   G+D+ ++  + ++  D         
Sbjct: 62  KYLPKLISGEY-------------VGALAMSEPNAGSDVVSMKLRAEQKGDHFVLNGSKM 108

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +   +D  ++ A+ + + G   +   L +    G  +    +K+G R + T  L F 
Sbjct: 109 WITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPLFFD 168

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGIL 349
           N        L      V+ +   +  + A++S   +  M   L   I Y  +R   G  L
Sbjct: 169 NVEVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQREQFGQAL 228

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  +M+  +AD+     A  AL + +  + D+A          R  A     +  + A 
Sbjct: 229 GEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRS----LRKDAASAILYAAEKAT 284

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +  EA++ +GG+GYI E    R +R++    I  G+     + +   L   T 
Sbjct: 285 WMAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGTSEIRRMLIGRELFNETK 338


>gi|329960099|ref|ZP_08298563.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057]
 gi|328533051|gb|EGF59824.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057]
          Length = 567

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 83/450 (18%), Positives = 172/450 (38%), Gaps = 43/450 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE+       L   +  GL+     R F  +          A +   A    G++ S  
Sbjct: 84  RVEYASGTKQNLDAMVKAGLNGMTMPRRFGGLNFPITPYTMCAEIVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P+I   E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGNEDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +     ++  + L+G K F+++  ++  ++LA+ E G      +   + D +  G+  +
Sbjct: 189 LKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDGRGLSMFIYDKNEGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L GD  +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKLGIHGSPTCELVYKNAKAELCGDRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------- 381
            E + YA+ R   G  +I+ P +   +A +   + A  +L ++ +   D           
Sbjct: 309 NEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGRSLLYQTSRYVDIYKALDDISRE 368

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E + + + +  A    P+ K    + A     ++++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAYDSIQIHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRD 489
           ++   SI  G+     +  +  +  G+ +       +       Q L    K++   L  
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGSYVATLRDYEMIPCSAEMQPLMERVKEMANKLDA 488

Query: 490 SISLCKE--DKGLARFLTEKIALASSAAAL 517
             +  KE  ++ L  FL+ ++   ++   +
Sbjct: 489 CTNAVKEAQNQELLDFLSRRLYEMAAVCIM 518


>gi|209966788|ref|YP_002299703.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209960254|gb|ACJ00891.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 396

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 152/397 (38%), Gaps = 28/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL+R             P  ++W++    PA H + ++    GL        +  
Sbjct: 4   TQEHKELSRTVEKFVAT--ELNPYVDQWEEEGIFPA-HEVFKKLGDAGLLGITKPTEYGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++   AA  Y    A      +   +  +   +A   +  + +++ P        
Sbjct: 61  LGLDFSYAAVAAEAYGTCRAGGVPMAIGVHTDMATPALARFGSDELRREFLP-------- 112

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                PM        LG++E   G+D+A++ +  +K  D      G  W  S   +D   
Sbjct: 113 -----PMIAGDQVWCLGVSEPGAGSDVASVKTTARKDGDDYVINGGKMWTTSGTQADVMC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGD 301
           +LA             ++      G+   R  +K+G R + T ++ F +      +L+G+
Sbjct: 168 LLANTSDGAPHKNKSLIVLPMKTKGVTVARKLDKLGMRCSDTAQIHFEDVRVPRRYLIGE 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             +  A  S+  M + + + + Y R R   G  LID   +   +A+
Sbjct: 228 EGMGFTYQMLQFQEERMWGAAGSLRSMDIMIDDVVAYTRNRIAFGKPLIDNQYIHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL++R   +F   K        A ++A + K    ++   V    ++  GG
Sbjct: 288 LKAEVEALRALTYRAVETFINGKD-------ATMLASMAKLKSGRLLREVADGCLQYYGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ E  I+R++R+S   SI  G+   M+  +   +
Sbjct: 341 MGYMNEMPISRYFRDSRLTSIGGGADEVMLSIICKYM 377


>gi|126643068|ref|YP_001086052.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 323

 Score =  258 bits (660), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 122/343 (35%), Gaps = 26/343 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +      + + +        A   +      S   A+ +         + W PK+ +
Sbjct: 2   PEQYGGSGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYINNFGNEEQKQKWLPKMAT 61

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
            E                 + +TE   G+D+ A+ +      D  Y ++G K F+++   
Sbjct: 62  GE-------------TVTAIAMTEPGTGSDLQAVRTTAVLDGDE-YVINGSKIFITNGYL 107

Query: 240 SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            D  I++ +      G   +  ++ +    G    +  NKIG +   T EL F N     
Sbjct: 108 CDMAIVVCKTGNSDKGSANLSLIIVEADRTGFTKGKPLNKIGMKGQDTCELFFDNVRVPK 167

Query: 299 LGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L +   G +  MK L    +  AI+  +G   + A  + Y + R   G  +      
Sbjct: 168 ENLLGMEGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGAFQNT 227

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++  +I        R      + K   E AA A       KY    M   V+ E 
Sbjct: 228 RFKLAELRTEIDFCRTYLDRCMELQLDEKLSVEAAAAA-------KYKISDMFSKVVDEC 280

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY+ E  IAR Y +  AN I  G+   M   +   L
Sbjct: 281 LQLHGGYGYMMEYPIARAYIDHRANRIYAGTNEIMKELISRTL 323


>gi|319795700|ref|YP_004157340.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598163|gb|ADU39229.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 586

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/532 (18%), Positives = 191/532 (35%), Gaps = 73/532 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------ 95
           LL A++        + L    E   +  +Q L   A +    +      G+         
Sbjct: 13  LLNAVLD--APARLQALAPFAEVDEALQSQVLDEAARFVGDVVAPINREGDEIGCHFDKG 70

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V   P + A  +  +  G                    + A     ++    G  M+P 
Sbjct: 71  EVVSPPGFRAAYQAFVDGGWPALSAATEDGGQGLPS--VLEAVLYEWLSAANHGLTMAPG 128

Query: 156 VTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +   +   +    +  +   +  KI + E+                + LTE   G+D+  
Sbjct: 129 LLHGAYACIKHHGSDELKSRYLQKIATGEW-------------LATMCLTESHAGSDLGQ 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GRVGCFLV--PRLL 262
           + ++    +DG + +SG K F+S    D       ++L ++     G  G  LV  P+LL
Sbjct: 176 VRTRAVPQADGSFRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPAGPKGLSLVLMPKLL 235

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG+ N +  +R++ K+G   + T  + F +  G+L+G+       +  M     L  A+
Sbjct: 236 PDGARNAVHCERIEEKMGLHGSPTCSMRFDDATGWLVGEAGRGLAAMFVMMNSARLHVAL 295

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGI--------------LIDQPVMKRAIADIALDIAA 368
             +  +  +  +A  YA  R                    + + P ++R +      I  
Sbjct: 296 QGIGLLDAAWQKADAYAAERRQMRAPGAVPANRGTEAADLIAEHPAIRRILDTQRAWIDG 355

Query: 369 ATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  L++R A   D      + K+R     +  ++ P+ K  C   A    +E ++  GG 
Sbjct: 356 ARTLAYRSALMLDVAAHDADPKARERAQRWCSLVTPVLKAACTHQAFHGASECLQVFGGH 415

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY+ E  I +  R++    I  G+     +D+             L   +  D G++   
Sbjct: 416 GYVREWGIEQVVRDARVTMIYEGTNEIQAIDL-------------LVRKVLPDGGAAMSA 462

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN----DIADVFL 530
           V+  LRD++   +E     +    ++    +  A+          ++AD +L
Sbjct: 463 VLLELRDTLDASREADADVQRRLAQLRYLGTTIAMSAHANPVLPYEVADDYL 514


>gi|197106815|ref|YP_002132192.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480235|gb|ACG79763.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 595

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/534 (18%), Positives = 187/534 (35%), Gaps = 65/534 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---V 97
           LL  ++                  +    +E  +  +     L+      G  W     V
Sbjct: 13  LLRDVLQLDRHANLPAFADASMDTVEAILEEAGKFTSEVLAPLNPVGDKEGCTWSPDFTV 72

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                +     + +  G      D +F        H +  A   + +       M P +T
Sbjct: 73  RTPTGFKEAYAQLVEAGWPALGADPAFGGQGLP--HVVNVAFSEMSSSANMAFSMYPGLT 130

Query: 158 SASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +  A+    +P     + PK+ S  +             A  + LTE   GTD+  + 
Sbjct: 131 HGAYSAIHVGGSPEQKALYLPKLASGHW-------------AGTMNLTEPHCGTDLGLLR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++    +DG Y ++G K ++S    D       ++LA++EG       +  F+VP+ + D
Sbjct: 178 TKAVPQADGTYKITGQKIWISGGEQDLTPNIVHLVLARIEGAPAGVRGISLFIVPKFIPD 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    L+ K+G   NAT  +      G+L+G+ N     +  M     L 
Sbjct: 238 ANGEPGERNSVKCLGLEEKMGIHGNATCVISHEEATGWLVGEENQGLKLMFVMMNEARLG 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  ++    +   A  +A+ R                  +I  P ++R + D    I 
Sbjct: 298 VGLQGIAQAEAAYQAAAEFAKERLQGRSLTGPKNPDGPADPIIVHPDVRRMLLDSRALIE 357

Query: 368 AATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              A     A   D A +  +EA       Y  +M P+ K +       V ++AM+  GG
Sbjct: 358 GGRAFMAWTALHGDLAHASEDEAVRQKGRDYMALMTPVVKAFLTDRGFKVCSDAMQVHGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
           SG+ E    +++ R+     I  G+     LD++   L   G       F+ L+  +  +
Sbjct: 418 SGFTEHFPASQYLRDVRIALIYEGTNGVQALDLVGRKLAADGGRAVMSFFAELDAFVAEN 477

Query: 480 -GKKVITILRDSISLCK-EDKGLARFLTE------KIALASSAAALYRAGMNDI 525
            G   +    + ++  K E +    +L +        A A+S   L   G+  +
Sbjct: 478 EGDPGLKPFVEGLARAKGELQEATMWLMQNGLANPDNAGAASTDYLQLFGLTAL 531


>gi|149912203|ref|ZP_01900784.1| isovaleryl-CoA dehydrogenase [Moritella sp. PE36]
 gi|149804726|gb|EDM64775.1| isovaleryl-CoA dehydrogenase [Moritella sp. PE36]
          Length = 390

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 58/380 (15%), Positives = 128/380 (33%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    PA   + ++    GL        +  V     AH I    +   +   
Sbjct: 33  PRAAQIDRDNLFPA--DMWQKFGDMGLLGITISEEYGGVNMSYLAHVIAMQEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +      +  + + PK+ S E+                L +TE   
Sbjct: 91  GLSYGAHSNLCVNQIYRHGNAQQKQQYLPKLISGEH-------------VGALAMTESNA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++        D         W  + P +  +I+ A+    +    +   + +   
Sbjct: 138 GSDVVSMKLSAVLDGDDYILNGNKMWITNGPEASTYIVYAKTAPELNSHGITAFIVERGL 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            G    +  +K+G R + T EL F +        L      V+ +        L      
Sbjct: 198 AGFSQAQKLDKLGMRGSNTCELVFQHCRVPKTNILGTLNHGVQVLMSGLDYERLVLTGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   +   + Y  +R   G  + +  +++  IAD+   + AA   ++ +A + D   
Sbjct: 258 LGIMDACMDLVVPYIHQRKQFGKAIGEFQLVQAKIADMYSQMNAAKCYTYTVARACDNGD 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++             +  ++A  +  + ++ +GG+GY  E    R  R++    I  
Sbjct: 318 ASRKD-------CAGVILYSAELATKMALDTIQLLGGNGYSNEYPAGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+     + +   L   +  
Sbjct: 371 GTSEMRRILIGRELFNESGA 390


>gi|228999481|ref|ZP_04159059.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock3-17]
 gi|228760192|gb|EEM09160.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides
           Rock3-17]
          Length = 381

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 138/382 (36%), Gaps = 33/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   A        G  C + D  +        + +             
Sbjct: 27  PYYNEWEKEGIIP--RAFWTSMGSKGFLCPMVDERYGGAGADFGYSVVINEELEKVGSSL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +           T    K W PK  S E                 + +TE   G
Sbjct: 85  IGIGLHNDIVVPYFTQYGTEEQKKRWVPKCVSGEC-------------ITAIAMTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLVPRLLEDG 265
           +D+A+I +  +K  D  Y ++G K F+++ + +D  I++ + +  +      +  L+ + 
Sbjct: 132 SDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLLVLER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +   KIG  S  T EL F +       LLG+       + +      L  AI
Sbjct: 191 GMEGFKRGKKLKKIGLHSQDTAELIFEDVKVPASNLLGEEGKGFYYLMEKLQQERLIVAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +   V L    +Y + R   G  + D   ++  +A++  +I              D+
Sbjct: 251 AAKAAAEVMLHITKNYVQERKAFGKSISDFQTVQFRLAEMYTEIEIGRTFV-------DD 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +             + K+W   +A  V AE ++  GG GY+EE  IAR YR+ P ++I
Sbjct: 304 CIANHMNGENIVTKVSMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAI 363

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+   M     N++ KG  L
Sbjct: 364 YAGANEIMK----NIIAKGMGL 381


>gi|226943545|ref|YP_002798618.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718472|gb|ACO77643.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 585

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 110/544 (20%), Positives = 198/544 (36%), Gaps = 62/544 (11%)

Query: 44  VALIANFPSV-VHKELELLGEYVLSCTAQELARMANYNTPQLH-AYGPGGERWD--KVEF 99
              +A           E L   + +   +E AR A+     L+      G R++  +V  
Sbjct: 16  EEWLAAPADWQGMPAFESLDGELAAQVIEEAARFASGVLAPLNAPGDRQGCRFENGRVTT 75

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              + A  R  +  G                Q   + AA L ++        M P +   
Sbjct: 76  PDGFPAAYRAFVEGGWAALACAPEDGGQGLPQ--LLNAALLEMIYSTNHAWAMYPGIAHG 133

Query: 160 SMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   L    TP + + +   I S E  PT             + LTE + G+D+  + S+
Sbjct: 134 AYECLRAHGTPELRERYLADIVSGEILPT-------------MCLTEPQAGSDVGLLRSR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDGS 266
            +  +DG Y LSG K F S    D       ++LA++         +  FLVP+LL DG 
Sbjct: 181 AEPAADGGYRLSGSKLFASGGEHDLTGNILHLVLARLPDAPPGSRGISLFLVPKLLPDGR 240

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N +    +++K+G R +AT  L F +  G+LLG+ +     +  M     L   +  + 
Sbjct: 241 RNAVRCDGIEHKLGIRGSATCTLSFEHAEGWLLGEPHKGLAAMFVMMNSARLHVGLQGLG 300

Query: 327 GMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALS 373
               +   A  YA  R                   +   P M+R + ++        AL 
Sbjct: 301 HAEAAWQNAAQYAAERRQMRAVRRPPGRAEAPADPIHYHPAMRRVLLELRTLTEGMRALG 360

Query: 374 FRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A+  DEA+  ++          A ++ P+ K +  +    + + A++  GG GY++E
Sbjct: 361 YWTAHLLDEAEQGADPARRARAQGRAMLLTPLVKAFFTEQGFRLASAALQVFGGYGYVQE 420

Query: 428 RSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVI 484
            +I +  R+S    I  GS       L +  +L  G  +   L      +   ++     
Sbjct: 421 YAIEQTLRDSRIAMIYEGSNEIQANDLLLRKVLGDGGAVLRDLLEEFRAEAEVAAICPDC 480

Query: 485 TILRDSIS-----LCKEDKGLARFLTEK--IALASSAAALYRAGMNDIADVFLEN-RFLD 536
                +++     L    +GLA   T+       ++   L   G+  +A  +L + R   
Sbjct: 481 AAFAATLAHYCDCLTTAAEGLAAATTQDPERPYRAAGDFLRLLGLVALAFAWLRSARLAA 540

Query: 537 NCHS 540
               
Sbjct: 541 GRGG 544


>gi|329894555|ref|ZP_08270363.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328922993|gb|EGG30319.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 600

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/482 (17%), Positives = 178/482 (36%), Gaps = 51/482 (10%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSI 111
             E E +   ++    ++ A+        L  +    G +W  + V+    +     + +
Sbjct: 28  LPEFEEVSPDLIDAILEQGAKFCEDVLAPLNESGDEEGCQWTPEGVKTPAGFAQAYAQYV 87

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D  +          +  + L   A          S  +   +    +    
Sbjct: 88  EGGWPSLAADVEYGGQGMPNTLGLCMSELTGTANWAWSMYPGLSHGAIKTLEEHGSEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +  ++ S E+  T             + LTE   GTD+  + ++  +  DG + L G 
Sbjct: 148 QRYLTRLVSGEWTGT-------------MCLTEPHCGTDLGLLRTKAVRNDDGSFSLHGT 194

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+S+   D       I++A++EG       +  F+VP++  +     G  N L    +
Sbjct: 195 KIFISAGEHDMAENIVHIVIARIEGAPEGTKGISLFVVPKVNVNEDGTLGGRNALNCASI 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G +++AT  + F    G+L+G  N     +        L +A+  +    ++   A
Sbjct: 255 ESKMGIKASATCVMNFDGAKGYLIGPENRGLNCMFTFMNAARLGTAVQGLCHAELAYQGA 314

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
             YAR R                  ++  P ++R +         + A  F LA   D  
Sbjct: 315 FSYARERLAMRSLTGPKNPDGPADPILVHPDVRRMLLTQRAIAEGSRAFLFFLALQGDII 374

Query: 384 KSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++ +EE A        ++ PI K +  ++        ++ +GG GYI E  + +  R++ 
Sbjct: 375 RAGNEEQAKQADNLMALLTPIAKAFVTELGFEAANHGVQVLGGHGYIREWGMEQIVRDAR 434

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              +  G+     +D++   +L  G  L     + +++    +  + +     ++S  K+
Sbjct: 435 IALLYEGTTGVQAMDLIGRKVLGSGGKLLMDFTAIMDEFCQGAHPEQVAGYISTVSALKD 494

Query: 497 DK 498
           + 
Sbjct: 495 EW 496


>gi|323526936|ref|YP_004229089.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323383938|gb|ADX56029.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 596

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/470 (19%), Positives = 183/470 (38%), Gaps = 59/470 (12%)

Query: 73  LARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEP 126
           L   A      L      G+R      D V    P +    R+    G         ++ 
Sbjct: 41  LEESAKLCGEVLAPLNVEGDRNPSSWKDGVVTATPGFGDAFRQFAEGGWQGVQHPVDYDG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYD 184
               +   I    + ++        + P +T  ++ AL+T  +    + + PK+ S E+ 
Sbjct: 101 QGLPK--LIATPCVEMLNASNLSFALCPLLTDGAIEALLTAGSDAQKQTYVPKLISGEWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + G+D+A + ++ +   DG + + G K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLALVRTRAEPQGDGSFRIFGTKIFITWGEHDMAK 205

Query: 243 ---FIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA+          +  F+VP+ L +     G  N +    +++K+G +++ T  
Sbjct: 206 NIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAV 265

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +     G L+G+ N     +  M         +  V     +  +A  YA+ R  S
Sbjct: 266 LQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFAVGMQGVGVSERAYQKAAAYAKERVQS 325

Query: 346 GGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
             I         +++ P ++R ++ +     A+ AL++  A   D A    +EA  A   
Sbjct: 326 RPIDGSAKQSVAIVEHPDVRRMLSTMRALTEASRALAYVAAAHSDIAHRHPDEAKRAEHQ 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K W  +++  V +  ++  GG G+IEE   A++YR++    I  G+    
Sbjct: 386 AIYEFLVPIVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
             D++    +  G  + + L + + Q + + G +         +   + +
Sbjct: 446 ANDLIGRKTVRDGGKVAKALLAEVAQTVEALGSQPGAAFESMKTYLAQGE 495


>gi|312114716|ref|YP_004012312.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219845|gb|ADP71213.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 597

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 110/509 (21%), Positives = 193/509 (37%), Gaps = 67/509 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERW--DKVEFHPAWHALLRRSIHDG 114
            E L         +E AR AN    P   A    G R    KV     +    R+ +  G
Sbjct: 29  FEDLDMDTARAILEEAARFANEELAPINRAGDTQGARLVDGKVVMPEGFTEAYRKWVEAG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172
                  +         +  +  A   +         ++P +T A + AL    +  +  
Sbjct: 89  WGSFTAPKEHGGQGLPVSLGMAVAE--MWHGANMAFGLNPLLTQAGVHALIAHGSEPLQT 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                + LTE + G+D+  + ++   + DG Y L+G K
Sbjct: 147 QYLPKLISGEW-------------TGSMQLTEPQAGSDLRFLKTRATPVGDGTYKLTGTK 193

Query: 233 WFLS---SPMSD--AFIMLAQ------VEGRVGCFLVPRLLED-----GSPNGLCYQRLK 276
            F++    PM+D    ++LA+          +  F+VP+ + +     G  N +   +L+
Sbjct: 194 IFITYGEHPMTDNIIHLVLARMPDAPFGTKGISLFVVPKFIPNADGSLGERNDVMAAKLE 253

Query: 277 NKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G   + T  + F +     G+L+G+ N     +  M     L   I  V     +  
Sbjct: 254 HKLGIHGSPTCVMNFGDRGGATGWLVGEPNGGLKAMFTMMNEARLGVGIQGVGIGERAFQ 313

Query: 334 EAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
           +A+ YAR R   G             +I+ P + R + ++    +AA A+++  + + D 
Sbjct: 314 QALDYARDRRQ-GAPESGGAADASVAIIEHPDVVRMLLNMKSKTSAARAIAYTTSVAIDI 372

Query: 382 -----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A  R   A  A ++ PI K           +E ++  GG G+IEE   A+HYR+
Sbjct: 373 SHRAADASERKRAANEAALLTPIAKAVSTDFGVETASEGIQVHGGMGFIEETGAAQHYRD 432

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-------GSSGKKVITIL 487
           +    I  G+       L    L   G   F +  + L++                   L
Sbjct: 433 ARIAPIYEGTNGIQAIDLVTRKLPLAGGETFREFLAGLKETAREVASSNDDGLGHTGECL 492

Query: 488 RDSISLCKEDKG-LARFLTEKIALASSAA 515
            +SI+  +E  G L R L E  A A + A
Sbjct: 493 WESITALEETGGWLTRQLAENRAAALAGA 521


>gi|85067515|gb|ABC69243.1| probable acyl-CoA dehydrogenase [Pseudomonas citronellolis]
          Length = 386

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 142/395 (35%), Gaps = 24/395 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P  ++W+K    P  H + +++   GL        F  
Sbjct: 4   TQEHEELRRTVRNF--VDKEINPYVDQWEKDGRFP-IHEVFKKAGALGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +    ++ + AA  +         +     T     AL            +  S E    
Sbjct: 61  MGLDYSYSVVAAEEFGTIHCGGVPMSIGVQTDMCTPAL-----------ARFGSDELREE 109

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P     +   +G++E   G+D+A + +  +K  D         W  +SP +D   +L
Sbjct: 110 FLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFICLL 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A             ++      G+      +K+G RS+ T ++ F +        +    
Sbjct: 170 ANTSDDKPHVNKSLIMVPMKSKGISVSPHLDKLGMRSSETAQVFFDDVRVPQRNRIGAEG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  M       L  A   + GM   +   I Y + R   G  LID  V+   +A++ 
Sbjct: 230 AGFMMQMLQFQEERLFGAASGIKGMEYCVNATIDYCKERKTFGQALIDNQVIHFRMAELM 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I    AL+++    +   K  +        +A + K    ++A  V    ++  GG G
Sbjct: 290 TEIECLRALTYQATEQYIRGKDVTR-------LASMAKLKVGRLAREVTDACLQYWGGQG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ E  I+R YR++   SI  G+   M+  +  L+
Sbjct: 343 FMWENPISRAYRDTRLVSIGGGADEIMLGIICKLM 377


>gi|193706910|ref|XP_001952123.1| PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 419

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 141/391 (36%), Gaps = 38/391 (9%)

Query: 98  EFHPAWHALLRRSIHDGL--HCSIWDRS--FEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +    +  L R+   + +    + +DR+  +   + K+AH +     ++    E    M+
Sbjct: 39  DTQKEFRDLARKFAREEIIPVAAEYDRTGQYPWDIIKKAHSVGLLNGHI---PEHCGGMN 95

Query: 154 PSVTSASMVAL---MTTPRVHKDW-------APKIFSR--EYDPTNKAPMQKTSVAIGLG 201
            SV    +VA         +            P I     E        + +  +    G
Sbjct: 96  MSVMDGCLVAEELGYGCTGIKTALEASGLGQMPVIIGGNKEQQKKYLGRLIEEPLVAAYG 155

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLV 258
           +TE   G+D+ A+ ++  K  D         W  +  +++ + +LA+ +           
Sbjct: 156 VTEPGAGSDVNALKTKAVKKGDEYIINGQKMWITNGGVANWYFVLARTDMDPKAPASKAF 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316
              + D    GL   R +  +G +++ T  + F +         NV T   +  KI +  
Sbjct: 216 TGFIVDADTPGLTPGRKELNMGQKASDTRGITFEDVRVP---KENVLTAEGQGFKIAMAT 272

Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A  +V   + +L EA  Y+  R   G  +     +   +AD+A+ I  A   
Sbjct: 273 FDKTRPPVAAGAVGLAQRALDEAAKYSLERKAFGVPIAKHQAVAFMLADMAIGIEGARLT 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D+ +  S         A I+K +   +A     +A++  GG+G+  E  + +
Sbjct: 333 YMKAAYEVDQGRRNS-------YYASISKAYAADVANKCATDAVQIFGGNGFNTEYPVEK 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             R++    I  G+     L +   + + T 
Sbjct: 386 LMRDAKIYQIYEGTAQIQRLIISRDIIEKTK 416


>gi|172064817|ref|YP_001815529.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171997059|gb|ACB67976.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 596

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 94/494 (19%), Positives = 190/494 (38%), Gaps = 65/494 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLR 108
               E  G        +E A+        L      G+R      D V    P + A  R
Sbjct: 26  LPGFEEAGYDTAQAVLEESAKFC---GEVLAPLNVEGDRNPSSWKDGVVTATPGFGAAFR 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-- 166
           + +  G         ++     +   I    + ++        + P +T  ++ AL+T  
Sbjct: 83  QFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDGAIEALLTAG 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ S E+  T             + LTE + G+D+A + S+ +   DG Y
Sbjct: 141 TDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQGDGTY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGL 270
            + G K F++    D       ++LA+          +  F+VP+ + +     G+ N +
Sbjct: 188 KVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFMVNDDGSLGARNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G +++ T  L++ +     G+L+G+ N     +  M         +  +  
Sbjct: 248 HCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRGLEYMFIMMNAARFGVGMQGIGV 307

Query: 328 MRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSF---- 374
              +  +A  +A+ R  S            +I  P ++R +  +      A AL++    
Sbjct: 308 ADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRALTEGARALAYVAAA 367

Query: 375 --RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +A+   +  +R+   A    + P+ K W  +M   V +  ++  GG G+IEE   A+
Sbjct: 368 HSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVASLGVQVHGGMGFIEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           +YR++   +I  G+       L     L  G  + + L + +   + + GK        +
Sbjct: 428 YYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGDTVAALGKLDGA---AA 484

Query: 491 ISLCKEDKGLARFL 504
            S+  + +  AR L
Sbjct: 485 ASMKAQLEKGARAL 498


>gi|21231868|ref|NP_637785.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768004|ref|YP_242766.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21113589|gb|AAM41709.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66573336|gb|AAY48746.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 597

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 83/505 (16%), Positives = 172/505 (34%), Gaps = 61/505 (12%)

Query: 53  VVHKELELLG-----EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK----VEFHPA 102
                   LG       ++    +E  R        L++     G  +DK    V   P 
Sbjct: 20  GAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIGDEIGCAFDKSTHAVTTPPG 79

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           + A   + +  G +    +  F          +  + +   A L  G+    S  +   +
Sbjct: 80  FRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEAL 139

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + +   +    +  T             + LTE   GTD+  + ++ +  +
Sbjct: 140 RQHGEAWQQEVFLKPLIDGRWTGT-------------MCLTEPHCGTDLGLLKTRAEPNA 186

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y ++G K F+++   D       ++LA++         +  F+ P+   D     G 
Sbjct: 187 DGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDRDGTVGE 246

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N L    +++K+G + + T  + F    G+L+G  +     +  M     L   +  + 
Sbjct: 247 RNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSVGLQGIG 306

Query: 327 GMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF 374
               +   A+ Y R R  S               +I  P ++R +  I      +  L+ 
Sbjct: 307 LSERAYQNALRYTRERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEGSRLLAL 366

Query: 375 RLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A+  D A        R++       + PI+K    + +      A++C GG GYI E 
Sbjct: 367 HAASLVDVAHRGGSEQERADAETLVSFLTPISKACQTEWSVENTYHALQCFGGHGYIREY 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLG--SSGKKVI 484
            + +  R++   +I  G+     LD++      +     +   + +E      +    + 
Sbjct: 427 GMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHADNAALA 486

Query: 485 TILRDSISLCKEDKGLARFLTEKIA 509
             ++       E   L R + ++ A
Sbjct: 487 EFIKPLRDKASEWAMLTRDVLDRAA 511


>gi|254227629|ref|ZP_04921060.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262395677|ref|YP_003287530.1| isovaleryl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|151939671|gb|EDN58498.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25]
 gi|262339271|gb|ACY53065.1| isovaleryl-CoA dehydrogenase [Vibrio sp. Ex25]
          Length = 389

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 138/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F        AH I    +   +   
Sbjct: 33  PLAQSIDQSNDFP--NHLWSKLGDMGLLGVTTSEEFGGAGMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGTQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG+ N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGEENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYTQMNAAKAYVYAVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDSAGA-------ILYSAELATKMALDAIQLLGGNGYINEFDTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|91777396|ref|YP_552604.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690056|gb|ABE33254.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 379

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 135/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G   D+            ++  +GL C      +        H    A   
Sbjct: 29  PRQAQWDEAGC-VDR--------ETWLKAGREGLLCVTVPEEYGGGGGDFGHSAIVAEEL 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +        S  +A  +  + T    ++W P             P+ +    + + 
Sbjct: 80  HRAGVSGFSYSVHSDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIA 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+ +I +   +  D  Y ++G K F+S+ +  D  +++ + +   G   V  
Sbjct: 127 MTEPGTGSDLKSIRTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R   K+G  +  T EL F N       L+G+ N     + +      
Sbjct: 186 IMVETDRAGFRRGRKLEKVGQAAADTAELFFDNVRVPATNLIGNENGGFIHLMEELPQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+   + +   L   + Y + R      + D    K  +AD+     A   L     
Sbjct: 246 LIIAVYCAAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYI 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E K   +EAA A++ A    + C       I E ++  GG GY+ E  IAR + + 
Sbjct: 306 REHMERKLTLQEAAIAKLFATEAMWKC-------IDEMVQLHGGYGYMLEYPIARAFADM 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   +   +   L
Sbjct: 359 RVTRIFGGTSEVLRDLISRKL 379


>gi|312139135|ref|YP_004006471.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311888474|emb|CBH47786.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 382

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 81/392 (20%), Positives = 147/392 (37%), Gaps = 36/392 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +S TA++ A              PG   WD+ +  P    +LR++   G+       
Sbjct: 8   ERAISDTARDFAAE---------YLAPGAIEWDQNKHFPV--DVLRKAGALGMGGIYIRE 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
             +     +   +R               +S       M+         + W P + S E
Sbjct: 57  DVDGSGLTRLDGVRIFEQLATGCPSIAAYISIHNMVTWMIDEFGDDEQRRRWVPGLASME 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D AA++++  +  D  Y L+G K F+S    SD
Sbjct: 117 Q-------------LGSYCLTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            ++++A+  G  G   +   +      GL +   + K+G  +  T ++           L
Sbjct: 163 VYVVMART-GAAGARGISAFIVPKDTPGLSFGANEKKMGWNAQPTRQVILDQVRVPAANL 221

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 L+ A  SV G + +L +A+ Y   R   G  L++   ++  
Sbjct: 222 LGGEGEGFRIAMKGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFR 281

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +++ AA  L +R A++ D   +   E      +  + K +       V  EA++ 
Sbjct: 282 LADMRIELEAARTLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQL 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            GG GY+ E  + +  R+   + IL G+   M
Sbjct: 336 HGGYGYLAEYGLEKIVRDLRVHQILEGTNEIM 367


>gi|241111860|ref|XP_002399411.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215492973|gb|EEC02614.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 410

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 132/370 (35%), Gaps = 26/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+   +P     +RR    GL                 A+ I    +          +  
Sbjct: 58  DREHRYP--REQIRRLGEMGLMAVAVPTELGGAGLDYLAYAIGMEEISRGCASTGVVMSV 115

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      V    +    + +     + E                   L+E   G+D  A
Sbjct: 116 NNSLFLGAVLKYGSEAQKEKFIRPFTTGE-------------RVGCFALSEPGNGSDAGA 162

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++      D         W  S+   +A +++A V+       +   L      GL   
Sbjct: 163 ASTTAVLEGDHYRINGTKAWITSAHEGEAAVVMATVDKSKKHKGISAFLVPMPTQGLTLG 222

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           + + K+G R+++T  L F +        L     G    M +L    +  A  ++   + 
Sbjct: 223 KKEEKLGIRASSTSYLIFEDCLIPKEYRLGDEGMGFKIAMSVLDSGRIGIAGQALGIGQA 282

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ Y+ +R   G  L     ++  +AD+ + + +A  L++R A   D     ++EA
Sbjct: 283 ALECALEYSGKRQSFGQSLHSFQAIQMKLADMEVRLQSARLLTWRAAMLKDAGLKFTKEA 342

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A++ A        + A  V  +A++ +GG GY+ +    RHYR++    I  G+    
Sbjct: 343 AMAKLAA-------SEAATYVSHQAIQILGGMGYVTDMPAERHYRDARITEIYEGTSEVQ 395

Query: 451 VLDVLNLLEK 460
            L + N L K
Sbjct: 396 RLVIANNLLK 405


>gi|313888790|ref|ZP_07822451.1| acyl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845159|gb|EFR32559.1| acyl-CoA dehydrogenase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 378

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 122/371 (32%), Gaps = 28/371 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P    L  ++   G                +            A       +S 
Sbjct: 32  DRTGEFPE--ELYEKAKEQGYFALEVPEELGGPGLSRVDVAALFEEMAKADAGFATTISA 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      V +       +  A                          LTE   G+D +A 
Sbjct: 90  SGLGMKPVLIAGNQEQKEYIADVTLEGG--------------LGAFCLTEPGAGSDASAG 135

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           T+   +  D  Y L+G K F+++  ++  + + A  +   G   +   L      GL   
Sbjct: 136 TTTAVRDGDE-YVLNGRKCFITNGAVASYYCITAATDKSQGVRGLSMFLVPAGTPGLSAG 194

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           + ++K+G R++ T ++   +        +     G    MK L         ++V   + 
Sbjct: 195 KEEDKMGIRTSNTTDVVLEDCRIPAKNLIGQEGQGFSIAMKTLDQARAWMGCIAVGIAQR 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + EA  Y   R   G  +     ++  +AD+ +    A  +        D   + + E+
Sbjct: 255 GINEAKRYTTERIQFGKQINKNQAIQFKLADMDIQTEVARQMVANALTRMDMGLTYNRES 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A       I K +   +A  V  +A++  GG GY  E  + +  R++    I  G+   +
Sbjct: 315 A-------IAKCFASDIAMKVAEDAIQLFGGYGYSREYPVEKLLRDAKIFQIFEGTNEVL 367

Query: 451 VLDVLNLLEKG 461
            + V N L +G
Sbjct: 368 RIVVANNLLRG 378


>gi|311743451|ref|ZP_07717257.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312581|gb|EFQ82492.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 380

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 127/372 (34%), Gaps = 25/372 (6%)

Query: 93  RWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R D+ E    +   + R     GL    +        +     ++       A    G  
Sbjct: 30  RVDEAERSATFPREVFRTLGRAGLLGLPYPEELGGGGQSYEVYLQVVEEIASAWAAVGVG 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +S    S   ++   TP   + W P + +               +     L+E   G+D 
Sbjct: 90  VSVHALSCFGLSHAGTPEQQQRWMPDLLAG-------------DLLGAYCLSEAHAGSDP 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+ +   +  D         W      +D + ++A+     G   +   L      GL 
Sbjct: 137 AAMRTTAVRDGDEYVINGAKAWTTHGGEADVYKVMARTS-DTGGRGISCFLVPAGTPGLT 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
               + K+G  S+ T  + F +        LG+                L  A ++    
Sbjct: 196 ADNPEQKMGLMSSTTATMLFEDVRIPADRRLGEEGQGLSIALAGLDAGRLGIAAVATGVA 255

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L  A+ YA+ R   G  ++D   +   +AD+A  + +A A     A   D  +  + 
Sbjct: 256 QGALDVALAYAKEREAFGRPIVDHQGLTFLLADMAAAVESARATYLHAARLKDAGRPYAR 315

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +       A I K      A  V  +A++ +GG+GY ++  + R+ RE     I  G+  
Sbjct: 316 Q-------ASIAKLVATDNAMRVTTDAVQVLGGAGYTKDFPVERYMREVKVMQIFEGTNQ 368

Query: 449 AMVLDVLNLLEK 460
              L +   L +
Sbjct: 369 IQRLVIGRDLAR 380


>gi|239817250|ref|YP_002946160.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239803827|gb|ACS20894.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 596

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 90/505 (17%), Positives = 188/505 (37%), Gaps = 62/505 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLR 108
               E  G        +E AR    N   +      G+R        +V   P +     
Sbjct: 26  LPGFEDAGLETAQAVLEECARF---NQDVVAPLNIEGDRNPSSFKDGQVATTPGFKEAFA 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-- 166
           + +  G         F      +   I AA   ++        + P ++  ++ AL+T  
Sbjct: 83  QYVSGGWQGLQHPADFGGQGLPK--TIGAACGEMLNSANMSFALCPLLSDGAIEALLTAG 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S ++  T             + LTE + G+D+A + S+ +   DG Y
Sbjct: 141 SDELKAVYLEKLVSGQWTGT-------------MNLTEPQAGSDLALVRSRAEPQPDGTY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGL 270
            + G K F++    D       ++LA+V G       +  F+VP+ L          N +
Sbjct: 188 KVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVGKDGSLGARNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G +++ T  L++ +     G+L+G  N     +  M         +  ++ 
Sbjct: 248 HCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAVGMQGIAI 307

Query: 328 MRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              +   A+ YA+ R  S            +I  P +KR +  +        A++   A 
Sbjct: 308 AERAYQHAVAYAKDRVQSRPVDGSMNASAPIIHHPDVKRMLMTMRAYTEGCRAMASVAAA 367

Query: 379 SF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++       +A++R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+
Sbjct: 368 AYDAAHHHPDAEARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           +YR++   +I  G+       L        G    + + + +E+      +         
Sbjct: 428 YYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAELARSSSPAAAAV 487

Query: 491 ISLCKEDKGLARFLTEKIALASSAA 515
           +   K  +     + + +A  + A+
Sbjct: 488 LKRLKPAREAFIEVVDFVAGQTKAS 512


>gi|239916835|ref|YP_002956393.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281414704|ref|ZP_06246446.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838042|gb|ACS29839.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 377

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 130/374 (34%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  +  P    +L  +   GL              ++   I        A    
Sbjct: 25  PHALDWDAEKHFPV--DVLAEAGELGLGGIYVGEEHGGTGLERTDAILIFEELAKADPAF 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +      W P +                +      LTE   G
Sbjct: 83  AAYISIHNMVAWMIDSFGSDEQRARWIPDLVGM-------------AHLASYCLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  +  D  Y L+G K F+S   + D ++++ +     G   +  ++     
Sbjct: 130 SDAAALKTRAVRDGDH-YVLNGVKQFISGAGASDCYVVMCRT-ADTGARGISAVVVHKDT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +   + K+G  +  T ++ F +    +   LG+                L+    S
Sbjct: 188 PGLSFGPNEKKMGWHTQPTRQVIFEDVRVPVADRLGEEGDGFRIAMKGLNGGRLNIGACS 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G   +L +A  Y + R   G  L  +  +   +AD+++ +  A  +  R A++ D   
Sbjct: 248 IGGGLAALDKATRYLKERSAFGEPLTTKQALVFELADMSVKLETAHTMLMRAADALDRND 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +        +  + K    +        A++  GG GY+ E  + +  R+   + IL 
Sbjct: 308 PDT------VRLCAMAKLVATESGYEAADTALQLHGGYGYLHEYGVEKLVRDLRVHRILE 361

Query: 445 GSGNAMVLDVLNLL 458
           GS   M + V   L
Sbjct: 362 GSNEIMRMIVGRGL 375


>gi|111020379|ref|YP_703351.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819909|gb|ABG95193.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 121/369 (32%), Gaps = 26/369 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+ E    +   +       GL    +   +    +     ++               +
Sbjct: 31  VDEHEKSETYPEGVFATLGEAGLLSLPYPEEWGGGAQPYEVYLQVLEEIAARWASVAVAV 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S    +   +    T    + W P++                +      L+E + G+D A
Sbjct: 91  SVHSLACHPLMAFGTDEQKQQWLPEMLGG-------------NTIGAYSLSEPQAGSDAA 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+T +      G        W     ++D + + A+     G   +   L      GL +
Sbjct: 138 ALTCKASATEGGYVVNGAKAWITHGGIADFYNLFART--GEGSKGISCFLVPKDTEGLTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + + K+G  +  T    + + F      +G                 L  A ++V   +
Sbjct: 196 GKPEEKMGLHAVPTTSAHYDDAFVPAERRIGAEGQGLQIAFSALDSGRLGIAAVAVGLAQ 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L EA+ YA+ R   G  +ID   +   +AD+A  + +A A     A   D     S  
Sbjct: 256 AALDEAVAYAQERTAFGKKIIDHQGLGFLLADMAAAVDSARATYIDAARRRDAGLPYSR- 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K      A  V  +A++ +GG GY  +  + R+ RE+    I  G+   
Sbjct: 315 ------NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVERYMREAKITQIFEGTNQI 368

Query: 450 MVLDVLNLL 458
             L +   L
Sbjct: 369 QRLVISRTL 377


>gi|270008306|gb|EFA04754.1| hypothetical protein TcasGA2_TC030576 [Tribolium castaneum]
          Length = 373

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 12/273 (4%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           +        L ++E   G+D+ ++  + +K  D         W  + P +D  ++ A  +
Sbjct: 103 LCSGEYMGALAMSEPNSGSDVVSMKLRAEKKGDSYVLNGTKFWITNGPDADVLVVYAVTD 162

Query: 251 G--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
              +     +   + +    G       +K+G R + T EL F +       LLG  N  
Sbjct: 163 PNAKKPQHGISAFIIEKGFPGFKAGPKLDKLGMRGSNTSELIFEDCEVPKENLLGAENKG 222

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +     L  L  A   +  M+        YA  R      + +  +++  +AD+   
Sbjct: 223 VYVLMSGLDLERLVLAGGPLGIMQACCDITFSYAHVRKQFQTRIGEFQLIQGKMADMYTT 282

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I A  +  + +A + D  K  S++             +C + A  +  +A++ +GG+GYI
Sbjct: 283 IGACRSYLYNVAKACDNKKVNSKD-------CAGVILYCAEKATQMALDAVQILGGNGYI 335

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    R  R++    I  G+     L +   L
Sbjct: 336 NDYPTGRLLRDAKLYEIGAGTSEIRRLLIGRTL 368


>gi|220923545|ref|YP_002498847.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948152|gb|ACL58544.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 376

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 132/384 (34%), Gaps = 33/384 (8%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L  +      WD+    P     L      G    +    +            A   
Sbjct: 18  QERLKPFSAA---WDREARFP--REALAEMGALGFLGMLVPEEYGGAALDHVAYALAIEE 72

Query: 141 YLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                     +MS   +   M  L   T    + +               P+ K      
Sbjct: 73  IAAGDGAVSTIMSVHNSVGCMPILRFGTEEQRRRFL-------------VPLAKGEKLAA 119

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             LTE   G+D AA+ ++ +++ D        ++  S   +D  I+ A  +   G   + 
Sbjct: 120 FCLTEPSAGSDAAALKTRARRVGDRWILSGTKQFITSGRNADVAIVFAVTDPAAGKKGIS 179

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
             +      G    RL++K+G R++ T ++ F      L  DL +          L  L+
Sbjct: 180 AFVVPTDTPGYTVARLEHKLGQRASDTAQIVFEEM--ELTPDLMLGREGDGLRIALANLE 237

Query: 320 SAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + ++   V +A A   A       R   G  L     +   +AD+A  I AA  L  
Sbjct: 238 GGRIGIAAQAVGMARAAFAAALAYAGERETFGQKLTGHQAVAFRLADMATRIEAARLLVL 297

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +   +EAA A       K +  +MA AV ++A++  GG GY+ +  + + Y
Sbjct: 298 NAARLRDAGQPCLKEAAMA-------KLFASEMAEAVCSDAIQIHGGYGYLADYPVEQIY 350

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+     I  G+ +   + +   L
Sbjct: 351 RDVRVCQIYEGTSDVQRIVISRAL 374


>gi|26988773|ref|NP_744198.1| acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|24983569|gb|AAN67662.1|AE016396_4 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 616

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/483 (18%), Positives = 169/483 (34%), Gaps = 49/483 (10%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLH 116
            L    L    +E AR        L+      G +W   +V          R+ +  G  
Sbjct: 55  ELDRDTLDGILEEAARFTGQIIAPLNRNSDEQGCQWVGGEVTTPDGMRDAYRQYVEHGWA 114

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                +++      Q        + + A L        +  +   +    +  + + +  
Sbjct: 115 SMTGPQAYGGQGLPQMASASFHEMLMAASLSFRIYSGLTEGAVLALHRHGSEPLKQAYLS 174

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S E+  T             + LTE + GTD+A + ++ Q  +DG Y ++G K F+S
Sbjct: 175 RMVSGEWAGT-------------MCLTEPQAGTDLALLRTRAQPEADGSYRITGSKIFIS 221

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
               D       ++LA++         +  FLVP+LL  G  N L    L++K+G +  +
Sbjct: 222 GGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGGERNALGCGALEHKMGIKGAS 281

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T  + F    G+L+G+ N     +  M         +  +     +    + YAR R  S
Sbjct: 282 TCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQS 341

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RS 387
                          +I  P ++R +            L    A   D   +      R 
Sbjct: 342 RSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQ 401

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             A  A ++ PI K +   +   V +  ++  GG GYI E  + +  R+S    +  G+ 
Sbjct: 402 AAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTN 461

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARF 503
               LD++   +L  G      L   +       ++   +  +        +E + L+  
Sbjct: 462 GIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGGLQAMATGVGQRLEEWRALSGH 521

Query: 504 LTE 506
           + E
Sbjct: 522 VVE 524


>gi|289937513|ref|YP_003482115.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289533204|gb|ADD07553.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 379

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 147/398 (36%), Gaps = 32/398 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             +    +E     N  TP    +   G+      +      L R++             
Sbjct: 10  EAIRDAVREFGE--NEITPVAEEHDREGK------YPE---DLRRKAAEYDFVAPSIPIE 58

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +      +  K         A    G  +  +    +M+       + ++W PK+ S   
Sbjct: 59  YGGAGMDKLSKTIVTEELWRADPGIGSAVGSAGFGTNMIVEFGDEWMKEEWLPKVASG-- 116

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       VA    ++E   G+++A I +  +K  D         W  +  ++D  
Sbjct: 117 -----------DVASCSMISEPAHGSNVAGIETVAEKDGDEYILNGNKMWITNGTVADVG 165

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           +++A+         +   L     +G+  +++ NK+G R++   E+   +       ++G
Sbjct: 166 VVMAKTTPGERHRGITAFLLPMDTDGVLTEKIDNKLGIRASDLAEVVIDDARVPEENVIG 225

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +++     + +       + A  ++   + +L  AI YA  R   G  + +   ++  +A
Sbjct: 226 EVDNGFYQLMEFFASGRTNVAAQAIGAAQGALDAAIDYAGEREQFGQKIGEFQAIEHKLA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A  + AA +L++R A   ++          A   + + K +  ++A  V  E ++  G
Sbjct: 286 EMATRVEAARSLTYRAATEVEQNNQDV-----AAQFSSMAKLFASEIAVEVADEGVQVHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GSGY+ +    R+YR++    I  G+       + + L
Sbjct: 341 GSGYVTDYPAERYYRDARITKIYEGTSEIQKNIIADRL 378


>gi|145601203|ref|XP_363106.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145009233|gb|EDJ93944.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 445

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 135/377 (35%), Gaps = 34/377 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+ E      +L+ +    GL        +          I               L
Sbjct: 91  RDMDEAETMD--PSLVEQLFEQGLMGVEIPEEYGGAGMNFTSAIVGIEELARVDPSVSVL 148

Query: 152 MSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +    T   + +    +  + K + P++               T       L+E   G+D
Sbjct: 149 VDVHNTLVNTAIIKWGSAELKKRFLPRL--------------ATETVGSFCLSEPVSGSD 194

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             A+ ++  + SDG        W  +S  +D FI+ A +    G   +   + +    G 
Sbjct: 195 AFALATKATETSDGFKISGSKMWITNSMEADFFIVFANLNPDKGYKGITAFIVEKGTKGF 254

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMR 329
              + + K+G R+++T  + F +     +   N+        K  I  L+   + ++   
Sbjct: 255 SIAKKEKKLGIRASSTCVINFDDV---EIPKENLLGERGAGYKYAIGLLNEGRIGIAAQM 311

Query: 330 VSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
             LA      A  Y    R   G  + +   M+  +A   ++IAAA AL +  A   +  
Sbjct: 312 TGLALGAWENAARYCYNDRKQFGQFIGEFQGMQHQMAQSYVEIAAARALVYNAARKKEAG 371

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    +AA A       K +  ++A  V   A+E +GG G++ E    + +R+S   +I 
Sbjct: 372 EDFVRDAAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIY 424

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+ N  +  +   L+K
Sbjct: 425 EGTSNIQLNTIAKSLQK 441


>gi|326317771|ref|YP_004235443.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374607|gb|ADX46876.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 597

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/498 (19%), Positives = 188/498 (37%), Gaps = 60/498 (12%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRR 109
                 E  G        +E AR        L+      P   +  +V   P +    R+
Sbjct: 24  AALPGFEEAGLDTAQAVLEECARFNEGVVAPLNVAGDRNPSSWKDGRVTTTPGFKDAFRQ 83

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167
               G         F      +   I AA   ++        + P +T  ++ AL+T  +
Sbjct: 84  FAEGGWQGLQHPVDFGGQGLPK--TIGAACAEMLNSANMSFALCPLLTDGAIEALITAGS 141

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +   +  K+ + E+  T             + LTE + G+D+A + ++ +   DG Y 
Sbjct: 142 DALKTTYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGTYK 188

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           + G K F++    D       ++LA+V G       +  F+VP+ L +     G+ N + 
Sbjct: 189 VFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVVPKFLVNADGSLGARNDVQ 248

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              +++K+G +++ T  L+F +     G+L+G+ N     +  M         +  ++  
Sbjct: 249 CVSIEHKLGIKASPTAVLQFGDGGGAVGYLVGEENRGLEYMFIMMNAARYAVGLQGIAVA 308

Query: 329 RVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +A+ YAR R  S            +I  P ++R +  +        A++   A +
Sbjct: 309 ERAYQQAVQYARDRVQSRPVDGSLPGSAPIIHHPDVRRMLMTMRALTEGCRAMASVAAAA 368

Query: 380 FDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +D A        R E  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+H
Sbjct: 369 YDAAHHHPDAAARKENQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQH 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS------TLEQDLGSSGKKVITIL 487
           YR++    I  G+      D++            L        T ++   +   +   + 
Sbjct: 429 YRDARILPIYEGTTAIQANDLVGRKTARDGAATALAVAAQARTTADELRAAGTPEAQAVA 488

Query: 488 RDSISLCKEDKGLARFLT 505
           R     C   + +ARF+ 
Sbjct: 489 RRLAEACDAFEEVARFIA 506


>gi|190572339|ref|YP_001970184.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010261|emb|CAQ43869.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 388

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/394 (20%), Positives = 134/394 (34%), Gaps = 26/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             AQ+  R A  +  Q     P   RWD     P     + ++   G      D      
Sbjct: 10  EEAQQAYREAARDFAQAE-LAPHAARWDAEGIFP--REAIAKAGELGFCGLYMDPEVGGS 66

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                    +S    ++ MV+    P +   W   + S       
Sbjct: 67  GLSRLDAAVVIEELANVDPSTAAYISIHNMASWMVSKWGQPALRDAWGTDLSSG------ 120

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D A++ +   +  D  Y L+G K F+S   +   +++ 
Sbjct: 121 -------LKLASYCLTEPGAGSDAASLKTTAVRDGD-FYVLNGSKAFISGAGATELLVVM 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G  G   V  +       G+ + R + K+G  S  T  + F N    +   L     
Sbjct: 173 ARTGGAGAGGVSAIAVPSDLPGISFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGG 232

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  S+   + +L  A  Y   R   G  L +   ++  +AD+  
Sbjct: 233 GFKLAMKGLDGGRINIAACSLGAAQGALDAARRYMGERRQFGKALAEFQALQFKLADMVT 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +    A   D        A+ A +   + K +       V  EA++  GG GY
Sbjct: 293 QLVAARQMVHTAARKLDAG------ASDANVWCAMAKRFATDAGFNVCNEALQIHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  I R  R+   + IL G+   M + V   L
Sbjct: 347 IREYPIERLLRDCRVHQILEGTNEIMRVIVARHL 380


>gi|166711615|ref|ZP_02242822.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 597

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 90/526 (17%), Positives = 179/526 (34%), Gaps = 67/526 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                     D L    +                 ++    +E  R        L++   
Sbjct: 7   PLTDFRFALHDVLGADALFARLGYADAS-----ADIIDAVLEEAGRFTAQVLAPLNSVGD 61

Query: 89  PGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             G  +DK    V   P + A   + +  G +    +  F          +  + +   A
Sbjct: 62  EIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L  G+    S  +   +           +   +    +  T             + LTE
Sbjct: 122 NLAWGNFPLLSHGAMEALRQHGEAWQQDVFLTPLIDGRWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         +
Sbjct: 169 PHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGI 228

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G  +     
Sbjct: 229 SLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKASVTCVMNFEGAQGYLVGQPHKGLQA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   +  +     +   A+ Y R R  S               +I  P ++
Sbjct: 289 IFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPADPIIMHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPA 410
           R +  I      +  L+   A+  D A        R++       + PI+K    + +  
Sbjct: 349 RMLLTIKSLTEGSRLLALHAASLVDVAHRGESEQERADAETLVSFLTPISKACQTEWSVE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQL 468
               A++C GG GYI E  + +  R++   +I  G+     LD++      +     +  
Sbjct: 409 NTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLF 468

Query: 469 FSTLE-----QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
            + +E     QD  ++  + I  LRD    C E   L R + ++ A
Sbjct: 469 LTDVETFANAQDGSAALAEFIKPLRD---KCSEWAMLTRDVLDRAA 511


>gi|190890257|ref|YP_001976799.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190695536|gb|ACE89621.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 598

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/495 (19%), Positives = 169/495 (34%), Gaps = 75/495 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E  ++A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAGKVAEE 51

Query: 80  N-TPQLHAYGPGG-ERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
              P  ++    G  R D   V     +    +     G         F        + +
Sbjct: 52  ALFPVNYSGDQEGCHRHDDASVSTPKGFREAYKAYREGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ A+    T    + + PK+    +  T       
Sbjct: 110 HCAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y +SG K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L       G+ N +    +++K+G   NAT  + +    GF
Sbjct: 217 IEGAPEGTKGISLFIVPKFLVGKDGAPGARNAVSCGAIEHKMGIHGNATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A  YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAAAYARDRIQGRSLSGVKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R +  I     A  A     A   D A   ++E           ++ PI
Sbjct: 337 ADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERRTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTL 472
              G      LF  +
Sbjct: 457 ALNGGRAAMALFKEI 471


>gi|320165791|gb|EFW42690.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 663

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/467 (17%), Positives = 169/467 (36%), Gaps = 58/467 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL+       +  +        R      +    A  LM+        + +  TP   
Sbjct: 143 ELGLYGLQIPEEYGGLGLSNTSYARVVEAIAIDGSIAVTLMAHQSIGLKGILMYGTPAQK 202

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + + PK+ + E+                  LTE   G+D A+I  +     DG  Y L+G
Sbjct: 203 EKYLPKLATGEH-------------TAAFCLTEPGSGSDAASIQLRATLSPDGKHYLLNG 249

Query: 231 HKWFLSSPM-SDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            K ++S+   +    + A+    +   G     +   + + +  G+   + ++K+G R +
Sbjct: 250 SKCWISNGGTAQIMTVFARTAIRDPTTGETKDKITAFIVERAFGGITSGKPEDKLGIRGS 309

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHY 338
            T E+ + N    +    NV + P +  K+ +  L+S    +           LA A  Y
Sbjct: 310 NTTEVHYENCPVPI---ENVLSEPGQGFKVAVNILNSGRFGLCAGAAGQSKRLLALASEY 366

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L    +++  +A++A+   A  ++++      D  +  +       + A 
Sbjct: 367 ASTRKQFGSPLSSFGLIQEKLANMAVSSYAMESMAYMTTGMIDSGEPDTA------VEAA 420

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV---- 454
           I K +  + A     EA++ +GG G+++     R  R+     I  G+   + + +    
Sbjct: 421 ICKVYGSESAWTNCHEAVQVLGGIGFMKSLPFERFMRDCRILLIFEGTNEILRMFIALNG 480

Query: 455 -------LNLLEKGT------NLFEQLFSTLEQDL--GSSGKKVITILRDSI--SLCKED 497
                  L  L K           +++   LE+ L  G+  K+    L +S+     +  
Sbjct: 481 VQYAGERLKRLSKAATNPFASGALDEIKEELERRLFSGARAKRSAVQLSESLHPRFAEHA 540

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              +R + +   L     ++ + G   I +  +  R  D     + M
Sbjct: 541 TKYSRLVVDFGKLV--DKSVIKHGKGIINEQMILKRMADVTIDLYGM 585


>gi|171318080|ref|ZP_02907250.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171096759|gb|EDT41643.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 596

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/507 (19%), Positives = 193/507 (38%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G         E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDTVAQLPGFEEAGYDTAQAVLDESAKFC---GEVLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P + A  R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGAAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERIQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   S+EA  AR  A      P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDVAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     +  G  + + L + +   + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIAEIGDTVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+  + +  AR L
Sbjct: 475 ALGKLDGA---AAASMKAQLEKGARAL 498


>gi|120556795|ref|YP_961146.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326644|gb|ABM20959.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 606

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 81/447 (18%), Positives = 157/447 (35%), Gaps = 57/447 (12%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E  R      +P   +    G   +  +V     +     + +  G      
Sbjct: 37  DIVDAILSECGRFCEEVLSPLYQSGDEEGCHLENGEVITPKGYKEAYEQYVMGGWQGLSA 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              F       +  +    +   A          S+ + + + L    +  + +   +  
Sbjct: 97  PEEFGGQGLPASMGLLKQEMMGTANWSFSMYPGLSLGAMNTIYLHGDEQQQQTYLAPLTE 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + GTD+  + ++ +  +DG Y L+G K F+SS   
Sbjct: 157 GRWGGT-------------MCLTEPQCGTDLGQVKTRAEPQADGSYKLTGTKIFISSGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L D     G  N +    L+ K+G +++
Sbjct: 204 DLTENIVHIVLARLPDAPKGTKGISLFIVPKFLPDAQGGVGERNAVSCGALEKKMGIKAS 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH- 343
           AT  + F    G+L+G  N     +        + +AI  V    +S   A+ YA+ R  
Sbjct: 264 ATCVMNFDGATGYLIGPENQGLECMFTFMNTARIGTAIQGVGPAELSYQWALDYAKERRS 323

Query: 344 ---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              +SG          LI    ++R +           ++ +  A   D           
Sbjct: 324 MRALSGKKEPDEVADSLIHHADVRRMLLTQKAIAEGGRSMLYYAAKIADHMVEAHTAGDT 383

Query: 393 AR---------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A+          + PI K +  ++        M+  GG GYI E  + +  R++   ++ 
Sbjct: 384 AKVEKYDDKLGFLTPILKGFLTELGCEATNLGMQVFGGHGYIREHGMEQIVRDTRIATLY 443

Query: 444 LGSGNAMVLDVLN----LLEKGTNLFE 466
            G+     LD+L     L+ +G  + E
Sbjct: 444 EGTTGIQALDLLGRKVLLMTQGGAVRE 470


>gi|76810463|ref|YP_331701.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|76579916|gb|ABA49391.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
          Length = 430

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++  V     + +        A    
Sbjct: 80  PHHERWEEQGYVD--RDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIARAGASG 137

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 138 LGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM-------------IGAIAMTEPGAG 184

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 185 SDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 243

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 244 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 303

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 304 IASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 363

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 364 LDAATASMA-------KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 416

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 417 GTNEIMKELIARTL 430


>gi|313679826|ref|YP_004057565.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152541|gb|ADR36392.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 582

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/470 (19%), Positives = 170/470 (36%), Gaps = 61/470 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK + +     L++R+   GL        +  +   +      A    +    +    + 
Sbjct: 56  DKEKMYEHSVRLMQRAGEQGLLGPDVPEEYGGLDLPKVVTSVVAENIAVTGGFSVTFSAH 115

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    TP     + PK+ S E+                  LTE   G+D  A 
Sbjct: 116 TGIGTLPIVYFGTPEQKAKYLPKLASGEW-------------ISAYCLTEPGSGSDALAA 162

Query: 215 TSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +      DG  Y L+G K F+++   +D FI+ A+++G          + +    GL  
Sbjct: 163 KTTATLSEDGKHYVLNGTKQFITNAGFADVFIVFAKIDGEK----FTGFIVEKGTPGLSL 218

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS 331
              ++K+G RS++T ++   +    +    NV     +  KI    L+     +    V 
Sbjct: 219 GPEEHKMGIRSSSTRQVILEDVKVPV---ENVLGEIGKGHKIAFNVLNIGRYKLGAAAVG 275

Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
            A     E+  YA +R      +     +K+ +A +A  I AA + ++R     D+    
Sbjct: 276 AAKEVLKESAKYALQRQQFNLPIAKFGAIKQKLARMAALIYAAESATYRTVGLIDDEIEA 335

Query: 383 -AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             K +  +A     I A I K    ++    + E ++  GG GYIEE  + R YR+S  N
Sbjct: 336 RGKDQIVDAIEEYAIEASIIKVLGSEVLDYAVDEGVQIHGGYGYIEEYMVERAYRDSRIN 395

Query: 441 SILLGSGNAMVLDVLNLLEK------------GTNLFEQLFS-TLEQDLGSSGKKVITIL 487
            I  G+     L +  +L +               L E+L   +  ++  +   +    +
Sbjct: 396 RIFEGTNEINRLLIPGMLLRRALKGELPLVEAAMKLQEELLEPSFGEEYENEWDREWAYV 455

Query: 488 RDSISLCKEDKGLA------RFLTEKIALASSAAALYRAGMNDIADVFLE 531
                L     G+A      + + E+  L ++A  L         D F  
Sbjct: 456 AGLKKLALMIAGIASQKFGEKIVKEQEVLMATADILI--------DAFTA 497


>gi|284163795|ref|YP_003402074.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013450|gb|ADB59401.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 379

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 152/399 (38%), Gaps = 25/399 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            + LS    E  R A     + +   P  E  D+   +P    L R++            
Sbjct: 2   AFTLSDEH-EAIREAVREFGE-NEIKPVAEEHDQEGKYPE--DLRRKAAKYDFVAPSIPL 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +      +            A    G  +  +   +SM+       + ++W PKI   E
Sbjct: 58  EYGGAGMDKIASTIVTEELWRADPGIGSAIGSAGFGSSMIMEFGDEWMKEEWLPKIADGE 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
               +              ++E   G+++A I +  +K  D         W  +  ++D 
Sbjct: 118 IASVS-------------MISEPAHGSNVAGIETVAEKDGDEYVANGNKMWITNGTVADI 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            +++A+     G   +   L +   +G+   ++ NK+G R++   E+   +       ++
Sbjct: 165 GVLMAKTSPGEGHKGITAFLVEMDWDGITTDKIDNKLGIRASDLAEVVIDDVRIPEENVI 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+++     + +       + A  +V   + +L  A+ YA +R      + +   ++  I
Sbjct: 225 GEVDKGFYQLMEFFAAGRANVAAQAVGAAQGALDAAVEYANQREQFDQKIKEFQAIQHKI 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A  + AA +L++R A   ++     E    A   + + K +  +++  V  E ++  
Sbjct: 285 AEMATKVEAARSLTYRAATQVEQ-----ENQDIAAQYSSMAKLFASEISVEVADEGIQVH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GGSGY+ +    R+YR++    I  G+       + + +
Sbjct: 340 GGSGYVTDYPAERYYRDARITKIYEGTSEIQKNIIADQI 378


>gi|108761574|ref|YP_633755.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108465454|gb|ABF90639.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 601

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/456 (16%), Positives = 164/456 (35%), Gaps = 48/456 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LLR++   GL       ++      +   +  A    +    +    + +      + 
Sbjct: 70  RQLLRQAGELGLLSVDIPEAYGGTGLDKTTSLLLAEAMSLNGSWSVTFGAHTGIGTLPIV 129

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
                     + PK+ + E+                  LTE+  G+D     ++      
Sbjct: 130 WFGNAEQKAKYLPKLATGEW-------------VAAYALTEQGSGSDALGAKTKAVLSPD 176

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                      +  ++  +D F++ A+V+G          + +    GL     ++K+G 
Sbjct: 177 GKHWILNGSKLYITNAAFADVFVVFAKVDGDK----FTGFIVEKDTPGLTVGPEEHKMGI 232

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
           R ++T  L F +    +   L  V  G      IL    L      + GM++ L  A+ +
Sbjct: 233 RGSSTCPLYFEDARVPVENQLGEVGKGHKIAFNILNYGRLKLGAGVLGGMKLQLQNALRF 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-- 396
            + R      ++  P+ +  +A +A  + A  ++++R A   D    + ++ A       
Sbjct: 293 TQERKQFNAPIVQFPLSREKLARMAALVYAVESMTYRTAGLVDARLGQGDKDAPDYEARL 352

Query: 397 ----------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                     + I K    +    ++ +A++  GG+GYIEE  + R YR++  N I  G+
Sbjct: 353 LEAVEEYAIESSIMKVHGSESFGHLVDDAVQLHGGAGYIEEYPVERSYRDARINRIFEGT 412

Query: 447 GNAMVLDVLNLLEK----GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
                + +  +L K    G      +   + ++L S G++    ++D+++  +     A+
Sbjct: 413 NEINRMLITGMLLKRAVRGDLPLFAMAGNVAEEL-SRGERPRARVQDALAPQEVAAEAAK 471

Query: 503 FLT---EKIAL------ASSAAALYRAGMNDIADVF 529
            L     ++A             +  A  + + D F
Sbjct: 472 HLALHGLRVAAETFGPELEQHQEVLAALSDVVMDAF 507


>gi|255319786|ref|ZP_05360991.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262380320|ref|ZP_06073474.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303105|gb|EET82317.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262297766|gb|EEY85681.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 390

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 133/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ER+++ +       L  ++   GL C      +      + + +        A   A
Sbjct: 39  PYTERYEQQQHVD--RDLWNKAGALGLLCPTMPEEYGGAGVDRLYSMILIEEQAYAGDSA 96

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A+ +      +  + W P++ + E             V   + +TE   G
Sbjct: 97  TGFSLHSDIVANYINNFGNEKQKQYWLPQMATGE-------------VVTAIAMTEPGTG 143

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           +D+ A+ +      D  Y ++G K F+++    D  I++ +      G   +  ++ +  
Sbjct: 144 SDLQAVRTSAILDGDE-YVINGSKIFITNGYLCDMAIVVCKTGNSDKGSANLSLIMVEAG 202

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIM 323
             G    +  NKIG +   T EL F N        L +   G +  MK L    +  AI+
Sbjct: 203 RPGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLGMEGMGFMMLMKELAWERMLVAII 262

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
             +G   + A  + Y + R      +      +  +A++  +I              D  
Sbjct: 263 CQAGAEAAFAHTVQYTKERKAFSKPIATFQNTRFKLAELRTEIDIGRTY-------LDRC 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EA      A   KY    M   V+ E ++  GG GY+ E  IAR Y +  AN I 
Sbjct: 316 MQLQLEAQLGIDAAAAAKYKLSDMYSKVVDECLQLHGGYGYMLEYPIARAYIDHRANRIY 375

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 376 AGTNEIMKELISRTL 390


>gi|262203762|ref|YP_003274970.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087109|gb|ACY23077.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 392

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 138/375 (36%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     LR +   G+              ++   +R       A    
Sbjct: 34  PFALEWDESNHFPV--DELREAAELGMGAIYCSEDVGGSGLRRLDGVRIFAQLAYADPAV 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       MV    T     +W P + + E                   LTE   G
Sbjct: 92  AAFLSIHNMCTWMVDAYGTDEQRAEWVPGLATME-------------TIASYCLTEPGAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA++++  +  D  Y L+G K F+S    SD ++++A+  G  G   +   L D   
Sbjct: 139 SDAAALSTKAVRSGDE-YVLTGVKQFISGAGSSDLYVVMART-GDAGPKGISTFLVDKDS 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIM 323
            GL +   ++K+G  +  T ++ F          L     +  G   +      ++ A  
Sbjct: 197 PGLSFGAQEHKMGWHAQPTAQVIFDEVRVPADRLLGAQEGIGFGIAMNGLNGGRINIAAS 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+ G + +  +A  Y   R   GG L+D+P ++  +AD+A  + A+  +    A + D  
Sbjct: 257 SLGGAQAAFDKAAAYVASRKAFGGALVDEPTIRFTLADMATGLQASRLMLEHAAAALDAD 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E         + K +       V   A++  GG GY+ E  I +  R+   + IL
Sbjct: 317 SPDKVEQ------CAMAKRFVTDTCYTVADSALQLHGGYGYLSEYGIEKIVRDLRVHRIL 370

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M + +   +
Sbjct: 371 EGTNEIMRVVLGRSI 385


>gi|99078037|ref|YP_611295.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99035175|gb|ABF62033.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 570

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 93/497 (18%), Positives = 183/497 (36%), Gaps = 48/497 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE----RWDK- 96
           LL  ++        +      + +++    E  +M++     L     GG+    R +  
Sbjct: 13  LLQQILGYDQITATERFAEADDDLMTAILTEAGKMSDEVMAPLQ---RGGDLEPARLENG 69

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V   P +    +     G      D  F  +    +       +   A L        S
Sbjct: 70  VVRTSPGYGDGYKAIAEGGWIGMSADPEFGGMGLPMSLTTAVNEMMSGACLSLQLAPLMS 129

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +    +  + + + PK+ + E+  T             + LTE + G+D+ A++
Sbjct: 130 QGQIEALEHHASDALKELYLPKLIAGEWAGT-------------MNLTEPQAGSDVGALS 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED 264
           S+ +   DG Y +SG K ++S   +D       ++LA++         +  FLVP+ L D
Sbjct: 177 SKAEDNGDGTYAVSGQKIYISWGDNDFTENVCHLVLARLPDGVPGTKGISLFLVPKYLPD 236

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N L    L++K+G   + T  +++    G+L+G  +     +  M     L 
Sbjct: 237 ENGNPGKANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLG 296

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATAL 372
                V     +   A+ YA  R             ++D   ++R + ++  D+ AA A+
Sbjct: 297 VGGQGVGVAEGAYQHALAYALDRKQGKTPVEGGTGTIVDHADVRRMLMEMKADVYAARAI 356

Query: 373 SFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               A + D   +   +E    A  + PI K +  +    V  + ++  GG G+IEE   
Sbjct: 357 MLACAGAIDMGTATGDAEWKTRAAFLTPIAKAFGTETGIRVAEQGVQVHGGMGFIEETGA 416

Query: 431 ARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           A+ YR+    +I  G+     +D V   +  G  +  +L   +E+    +      +   
Sbjct: 417 AQFYRDVRVTAIYEGTNGIQAMDLVARKMMDGGEMAHRLIDEIEEQAERARPTHPNMAEA 476

Query: 490 SISLCKEDKGLARFLTE 506
               C+  +    +L E
Sbjct: 477 VWQACETLREATEWLVE 493


>gi|126459920|ref|YP_001056198.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126249641|gb|ABO08732.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 407

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 85/406 (20%), Positives = 155/406 (38%), Gaps = 32/406 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            ++  TA+E A+   Y T +L          D  E  P    L R++   G   +     
Sbjct: 22  ELVRKTAREFAQ--RYFTREL------AREVDHKEEFP--WDLYRKAGELGFIAATLPPE 71

Query: 124 FEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +                 L+ A    G  +         + L  T    K + P      
Sbjct: 72  YGGGGLTTELASAVITEELVRADTTLGQGILSGAFGLYALYLFGTEEQKKQYIP------ 125

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                  P+ +      L LTE   G+DI  +++  +K  D  Y L G K F+++ P ++
Sbjct: 126 -------PVARGEKTFFLALTEPDHGSDITQLSTVAKKEGD-YYVLKGIKTFITNAPTAE 177

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-- 299
             ++LAQ E   G       L      G+  + LK K+G R++   E+            
Sbjct: 178 YGLILAQTEPEKGYRGQTLFLIHTDWPGVDVKPLKGKMGQRASPLGEIRLDGVKVPKEYV 237

Query: 300 ----GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                 LN           +  +    +++  M  +   A  +A++R   G  +I+  ++
Sbjct: 238 VGGPEGLNKGFYWALQYLNIGRVHVGAVALGMMLAAFDRAYDFAQKRVQFGRPIIEFQLI 297

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +A++A  I  +    +R     DE    + E      ++ ITK +  + A  VI  A
Sbjct: 298 QQKLAEMAQLIDISRLAVYRAHLILDEYIKGAVEPRTMAAISSITKVFVTENATKVIDHA 357

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++ +GGSGY+EE  + R +R+     I  G+     L +++ L +G
Sbjct: 358 IQILGGSGYMEEYDVERIWRDHRVTRIYEGTTEINTLTIVDSLRRG 403


>gi|33594204|ref|NP_881848.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33564279|emb|CAE43573.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332383618|gb|AEE68465.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 382

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 131/362 (36%), Gaps = 25/362 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++     GL        +  +      ++R    L   +        +     +  + 
Sbjct: 39  EIVQEMRDLGLFGLSIAADYGGLGLTMEEEVRVVFELGQTSPAFRSLAGTNIGIGSQSIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E             +     LTE   G+D  A+ +   +  D
Sbjct: 99  LAGTDDQRQRFLPKLASGE-------------LIGSFALTEPDAGSDAMALRTSAVRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+         +   L +    G+   +   K+G   
Sbjct: 146 HYVLNGTKRFITNAPVAGLFSVMARTAPERRADSISCFLVEAGTPGVTLGKPDKKMGQAG 205

Query: 284 NATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N        L     TG    M++L    L  A + V      + +A+ YA
Sbjct: 206 ALTCDVVFDNCRVPAEALLGGKEGTGFRTSMRVLDKGRLHIAALCVGIAERLVRDAVRYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD   ++ AA ++    A   D  ++ + EAA        
Sbjct: 266 LERKQFGQPIAEFQLVQAMIADSQTELYAARSMVLDAARKRDLGQNVTMEAA-------C 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +K +  +M   V   A++  GG+GYI E ++ R YR+     I  G+     L +     
Sbjct: 319 SKLYATEMVGRVADRAVQIHGGAGYISEYAVERFYRDVRLFRIFEGTSQIQQLVIARETL 378

Query: 460 KG 461
           K 
Sbjct: 379 KA 380


>gi|31791939|ref|NP_854432.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium bovis AF2122/97]
 gi|121636675|ref|YP_976898.1| putative acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989147|ref|YP_002643834.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|31617526|emb|CAD93636.1| PROBABLE ACYL-COA DEHYDROGENASE FADE9 [Mycobacterium bovis
           AF2122/97]
 gi|121492322|emb|CAL70789.1| Probable acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772260|dbj|BAH25066.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 390

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 145/383 (37%), Gaps = 32/383 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD  +  P    +LR +   G+              ++    R      +A
Sbjct: 21  KRLAPHALEWDAAKHFPV--DVLREAAELGMAAIYCRDDVGGSGLRRLDGARIFEQLAIA 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    T    KDW P++ +               V     LTE
Sbjct: 79  DPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATM-------------GVIASYCLTE 125

Query: 205 KRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260
              G+D  A++++  +      G Y L G K F+S   + D ++++A+  G  G   V  
Sbjct: 126 PGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAEGPRGVSA 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
            + +    GL +   + K+G  +  T ++            L  + G      I +    
Sbjct: 185 FVVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLN 244

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L+ A  S+ G + +  +A  Y R R   GG L+D+P ++  +AD+A  +  +  L +
Sbjct: 245 GGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLW 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A++ D+  +   E      +  + K +       V  +A++  GG GY+ E  + +  
Sbjct: 305 RAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIV 358

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           R+   + IL G+   M L +   
Sbjct: 359 RDLRVHRILEGTNEIMRLVIGRA 381


>gi|326330442|ref|ZP_08196750.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325951717|gb|EGD43749.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 388

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 125/375 (33%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+    P   A          H       +                   A   +
Sbjct: 33  PEAAQVDETSSFP--QAAYDALRAGDFHAPHIPGQYGGAGADALATCIVIEEVARACASS 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  +   + P             P+ +       GL+E+  G
Sbjct: 91  SLIPAVNKLGTMPLLLGASEELKATYLP-------------PVARGDALFAYGLSEREAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           +D AA+  +  +  DG        W  ++  ++ + +LA  +  GR G   V   + + +
Sbjct: 138 SDTAAMKCRAIRTGDGWVLNGQKSWITNASAAEYYTVLAVTDPDGRRGAN-VTAFVVERN 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIM 323
             G  +   + K+G + + T EL F +        +      ++          +     
Sbjct: 197 DEGFTFGAPERKLGIKGSPTRELRFDDVRIPEDRMVGREGEGLKLALQTLDHTRVTIGAQ 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + +L  A+ Y R R   G  + D   ++  +AD+ + + AA  + +  A   +  
Sbjct: 257 AVGIAQGALDHALDYVRERKQFGKRIADFQGLQFMLADMGMKLEAARNMVYVAAAKSERN 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A         K +   +A  V  ++++ +GG GY  +  + R  R++    I 
Sbjct: 317 D------ADLSFFGAAAKCFASDVAMQVTTDSVQLLGGCGYTRDFPLERMMRDAKITQIY 370

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 371 EGTNQVQRLVMARAL 385


>gi|146343641|ref|YP_001208689.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196447|emb|CAL80474.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 379

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    L  ++   GL    +   F  V   Q  +I +++    A +  
Sbjct: 28  PFANAWDEAGEFP--RTLYTKAAEIGLLGLGFPEEFGGVAADQFMRIVSSQELARAGIGG 85

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                 S    A  +A    P V     P+I S                   L +TE  G
Sbjct: 86  VSASLMSHSIGAPPIARAARPEVRAKVLPEILSG-------------RKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + ++  +  +  Y +SG K F++S +   +I +A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTKAVRDGNH-YVVSGEKTFITSGVRADYITVAVRTGGPGPAGVSLLLIPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   RL NK+G  ++ T  L F N       L+G+       +        +  A   
Sbjct: 192 PGLTRTRL-NKMGWWASDTATLHFDNCRVPAENLIGEEGQGFKLIMHNFNSERMGMAASC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +  RV L +AI YA+ R   G  L    V++  + D+A  +AA+ A+   LA   ++  
Sbjct: 251 TAFARVCLDDAIAYAKERQTFGKPLAQHQVIRHKLVDMAQRVAASQAMLEMLAWRLEQGD 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   E    +  A  T  +C        +EA++  GG+G++    + R YRE   N+I  
Sbjct: 311 NPVAEICMMKNQATQTMAYC-------ASEAVQIFGGAGFMRGVRVERIYREVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|89069610|ref|ZP_01156949.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89044808|gb|EAR50908.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 592

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/559 (18%), Positives = 192/559 (34%), Gaps = 81/559 (14%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK- 96
             D +L  L+    S+     + L          E  ++A      L      G+     
Sbjct: 10  DLDFVLHDLLK-VGSLDIPGYDELDRDTTRAILDESGKLA---AGVLAPLNQAGDAVGCT 65

Query: 97  -----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                V   P +     R    G      D  +               ++L A +     
Sbjct: 66  FENGVVRTPPGFADAYARMREGGWMGLDADPEYGGQGMPYLMNCATGEMFLSANMAFNTY 125

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +  + S +    T      W P + S ++  T             + LTE + GTD+
Sbjct: 126 QGLTHAAYSTIHAHGTDAQKTTWLPNMISGQWSGT-------------MNLTEPQCGTDL 172

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPR 260
             I ++ +   DG Y ++G K ++S+   D       ++LA++ G       +  F+VP+
Sbjct: 173 GLIRTRAEPAGDGSYRITGQKIWISAGEHDLTENIVHLVLARIPGAPEGTRGLSLFIVPK 232

Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            L D     G  N +    +++K+G   NAT  +      G+LLG+ N     +  M   
Sbjct: 233 FLLDDDGRPGPRNAVSCGGVEHKMGFHGNATCVINHDGATGYLLGEENAGMRAMFTMMNE 292

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIA 363
             +   +  V+   V+   A  +AR R                  +I  P ++R + D  
Sbjct: 293 ARIGVGLQGVAQAAVAYENAAAFARDRLQGRALAGAAAPERPADPIIVHPDVRRNLMDQK 352

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             +    A     A+  D A    +  A     ++ P+ K +           A +  GG
Sbjct: 353 AFVEGGRAFLLWGASLIDRAHRGRDADAEGLVSLLTPVIKGFLTDKGFETTVLAQQTFGG 412

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
           +G++ E  + +  R++    I  G+     LD++                  + LG+ G 
Sbjct: 413 AGFVRETGVEQFVRDARITMIYEGTNGVQALDLVG-----------------RKLGAGGG 455

Query: 482 KVITILRDSIS-LCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           K I    + I   C+E  G   F    +  L +++  L +AGM      F++        
Sbjct: 456 KYIMAYFELIKTWCREAAGDPDFDAAFVEPLKTASKQLQQAGM-----YFMQ----QGAT 506

Query: 540 STHCMLHGRFNAAHIIDSL 558
           +    L G ++  H++  +
Sbjct: 507 APENALAGSYDFLHMMGHV 525


>gi|317406282|gb|EFV86525.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 384

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 140/407 (34%), Gaps = 30/407 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +  L+   +  A+ A +Y   +L  +      WD     P       R+   G       
Sbjct: 2   DLELTDEQRAFAQAARDYAEGELAPHAAH---WDAEGIFP--KEAFARAGEMGFCAIYAS 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    ++    +  MV     P + + W P + S 
Sbjct: 57  EDIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMVGKWGQPALRETWGPLLASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A+++++ Q+  D  Y L+G K F+S     
Sbjct: 117 -------------QKLASYCLTEPGAGSDAASLSTRAQRQGDH-YVLNGAKAFISGGGDT 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++    G  G   +          G+ Y R + K+G  S +T  + F N        
Sbjct: 163 DLLVVMARSGGEGAGGISAFAVPADSEGISYGRKEEKMGWNSQSTRPIVFENVRVPAGNL 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++    SV   + +L  A  Y   R      L +   ++  
Sbjct: 223 LGEEGEGFKIAMKGLDGGRINIGTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  +    A   D           A     + K +   M   +  +A + 
Sbjct: 283 LADMATHLVAARQMVRLAACKLDAGAPD------AATYCAMAKRFATDMGFQICLDAQQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
            GG GY+ +  + R  R++  + IL G+   M + +   LLEKG ++
Sbjct: 337 HGGYGYLRDYPLERLVRDTRVHQILEGTNEIMRVIIARQLLEKGADI 383


>gi|149202685|ref|ZP_01879657.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149143967|gb|EDM32001.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 387

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 142/401 (35%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    P  +AL +     GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQERVKPMAAEVDRSNAFP--NALWQEMGDLGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  T    + + P + S     
Sbjct: 67  AGMSYLAHVIAVEEIARASASVSLSYGAHSNLCVNQIKLNGTEAQKRKYLPGLVSG---- 122

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                    +    L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 123 ---------AHVGALAMSEAGAGSDVVSMKLRAEKRNDRYVLNGTKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + +  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPEAGSKGITAFLIEKTMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  + +  +M+  IAD+
Sbjct: 234 GRGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYLAERKQFGQPIGNFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G++ +  +AR +R++    I  G+     + V   L     
Sbjct: 347 GFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMGAMA 387


>gi|154344857|ref|XP_001568370.1| acyl-CoA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065707|emb|CAM43480.1| putative acyl-CoA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 421

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 139/355 (39%), Gaps = 26/355 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDW 174
           +   +P V K+A       +   A L+         +++    +    AL  T  V    
Sbjct: 63  EGQMDPAVLKEAFAAGLMGIETPADLDGGGMSFFCSILAIEELARHDPALSVTVDVQNTL 122

Query: 175 APKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
              IF   + +       P   T       LTE   G+D  A+ ++  K           
Sbjct: 123 VNNIFFNFASDAQRRKYLPKLATDTVGCFCLTEASSGSDAFALKTRATKKGSKWIINGSK 182

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
            +  +   +  ++++A V+   G   +   + D S   G+   R ++K+G R+++T EL 
Sbjct: 183 LFITNGGWAGIYLVMATVDSSKGYKGITCFVVDSSETPGVSVVRTEDKLGIRASSTAELR 242

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
           F N       + NV     +  KI I  L+   + +    + +A+      + Y  +R  
Sbjct: 243 FENVEVP---EENVVGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQ 299

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   M+   A+ A+++ AA  + +         ++  ++AA A+  A +     
Sbjct: 300 FGKAIGDFQGMQMQYAECAMELHAARLMVYNACRKKQNNETFIQDAAMAKYFASVV---- 355

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              A    + A+E  GG G++++  + R YR++   +I  G+    +  +  +++
Sbjct: 356 ---AEKTASRAVEWAGGIGFMKDFGLERFYRDAKIGAIYEGTSIIQLQTIAKMIK 407


>gi|167647119|ref|YP_001684782.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349549|gb|ABZ72284.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 388

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 77/403 (19%), Positives = 146/403 (36%), Gaps = 37/403 (9%)

Query: 60  LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            LGE   +         A+   P            D     P    L       GLH   
Sbjct: 16  ALGETADAIRDTTARFAADRIAPI-------AAEIDATNVFP--RQLWVPMGDLGLHGIT 66

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  F  +      H +    +   +        + S    + +    TP   + + PK+
Sbjct: 67  VEEEFGGLGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQIRRWGTPEQKQRYLPKL 126

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+                L ++E   G+D+ ++  + + + D         W  ++P
Sbjct: 127 ISGEH-------------VGSLAMSEAGSGSDVVSMKLKAELVGDRYALNGTKFWITNAP 173

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D  ++ A+ + R     +   L +    G    +  +K G R + T EL F +     
Sbjct: 174 HADTLVVYAKTDERR----ITAFLIEKGMKGFSVSKKLDKFGMRGSDTAELVFEDCEVPE 229

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +    G V  +   +  + A++S   +  M+  L   + Y R R   G  +    +M
Sbjct: 230 ENVMGPVGGGVGVLMSGLDYERAVLSAGPLGIMQACLDVVLPYVRDRKQFGQAIGSFQLM 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ + + +A A  + +A + D  K+   +AA A +MA        + A  V  EA
Sbjct: 290 QGKIADMYVALNSARAYVYAVARACDAGKTTRFDAAGAILMA-------SENAVRVSLEA 342

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 343 IQALGGAGYTKEWPVERLMRDAKLYDIGAGTNEIRRFLIGREL 385


>gi|91079744|ref|XP_970506.1| PREDICTED: similar to CG12262 CG12262-PA [Tribolium castaneum]
 gi|270003324|gb|EEZ99771.1| hypothetical protein TcasGA2_TC002547 [Tribolium castaneum]
          Length = 419

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 136/392 (34%), Gaps = 36/392 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L+ T +E   +A     +     P    +DK   +P    +++++   GL      + 
Sbjct: 35  FALNDTQKEFQELARKFARE--EIIPVAAEYDKTGKYP--WDIIKKAWEIGLMNGHIPQE 90

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
              +          A             +  S    + V +       K +  ++     
Sbjct: 91  IGGMGNSVFDGCLIAEELAYGCTGIMTALEASGLGQTPVLIAGNKEQQKKYLGRLL---- 146

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                    +  +     +TE   G+D++ I ++ +K  D         W  +  +++ +
Sbjct: 147 ---------EEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWIINGQKMWITNGGVANWY 197

Query: 244 IMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            +LA+      C         + +    GL   R +  +G R++ T  + F +       
Sbjct: 198 FVLARTNPDPKCPAGKAFTGFIVERETPGLTPGRKELNMGQRASDTRGITFEDVRVP--- 254

Query: 301 DLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             NV  G     KI +          A  +V   +  L EA+ YA  R   G  +     
Sbjct: 255 KENVLVGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYANERKTFGVPIAHHQA 314

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A+ +  +     + A   D+ +  S EAA       I K +   +A     +
Sbjct: 315 VAFMLADMAVGVETSRLAWMKSAWRVDQGQRNSYEAA-------IAKCYAADVANKCATD 367

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A++  GG+G+  E  + +  R++    I  G+
Sbjct: 368 AVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGT 399


>gi|296141782|ref|YP_003649025.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029916|gb|ADG80686.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 386

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 135/377 (35%), Gaps = 29/377 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  ERW   + H        ++   GL C+    +         H        + A   
Sbjct: 33  TPNQERW--AQQHQVDREFWNKAGAAGLLCTELPEALGGAGGDFGHDTVVLEELVGAGDG 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A      S   A  +    T      W PK  S E               + + +TE   
Sbjct: 91  AFGYGVHSTICAHYIDDCGTEEQKARWLPKAASGE-------------AVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDG 265
           G+D+ A+ +   +  D  Y ++G K F+S+  + D  I++A+ +   G   +  ++ E  
Sbjct: 138 GSDLQAVRTTAVREGDE-YVINGSKTFISNGSLCDLLIIVAKTDTSQGAKGISLIVAETD 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSA 321
           +  G    R+  KIG     T EL F++    +   L      G  + M+ L    L  A
Sbjct: 197 NLPGFERGRVLQKIGQHGQDTRELSFTDMRVPVANLLGGVEGQGFYQLMRQLPRERLSIA 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I  V     ++ EAI Y + R   G  + D    K  +AD   ++ A   L        D
Sbjct: 257 IGGVDAAEKAVLEAIAYTKERKAFGHPIADFQNTKFVLADAKTEVFAGRTL-------ID 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R+ +       A + K W   M   VI   ++  GG GY+ E  IA+ Y  +    
Sbjct: 310 HCIGRAIDGTLDAATASMAKLWATDMQCRVIDSVLQLFGGYGYMMEYPIAQLYAGARVQK 369

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 370 IYGGTNEIMKELIARGL 386


>gi|328470881|gb|EGF41792.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus 10329]
          Length = 389

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 137/374 (36%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F    +   AH I    +   +   
Sbjct: 33  PLAQSIDQSNDFP--NHLWSKLGEMGLLGVTTSEEFGGANMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGTQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG  N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGQENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  +    +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGQFQLVQAKIADMYTQMNAAKAYVYAVAAACDRGE 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  +++A A         +  ++A  +  +A++ +GG+GYI E    R  R++    I  
Sbjct: 318 TTRKDSAGA-------ILYSAELATKMALDAIQLLGGNGYINEFDTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 371 GTSEIRRMLIGREL 384


>gi|290960182|ref|YP_003491364.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260649708|emb|CBG72823.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 389

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 158/405 (39%), Gaps = 39/405 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +EL R       ++ A    G+ +++ EF    + ++R     GL    +   + 
Sbjct: 8   LSPELEELRRTVEEFAHEVVA-PKIGDFYERHEFP---YEIVREMGRMGLFGLPFPEEYG 63

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +     A  I    L  +    A  L +     A  V L  TP    +W P++ S E  
Sbjct: 64  GMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPVHLFGTPAQKAEWLPRLCSGE-- 121

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSD-- 241
                      V    GLTE  GG+D  A  +  +   S   + ++G K F+++  +D  
Sbjct: 122 -----------VLGAFGLTEPDGGSDAGATRTTARLDTSTNEWVINGSKCFITNSGTDIT 170

Query: 242 AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           A + +  V GR   G  L+  ++      G       +K+G  ++ T EL F++      
Sbjct: 171 ALVTVTAVTGRTPEGKPLISSIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADVRVPAE 230

Query: 300 GDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
             L     G  + ++I   LD   +++S +   LA     E++ YA+ RH  G  +    
Sbjct: 231 NLLGEEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAKERHAFGRPIGANQ 287

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+ +    A       A      +   +EAA A       K +   +A     
Sbjct: 288 AIQFKIADMEMKAHTARLSWRDAAYRLVAGEPFKKEAALA-------KLYSSTVAVDNAR 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 341 DATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 385


>gi|195443644|ref|XP_002069509.1| GK11564 [Drosophila willistoni]
 gi|194165594|gb|EDW80495.1| GK11564 [Drosophila willistoni]
          Length = 384

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 140/380 (36%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  PA    +++    GL        +                        
Sbjct: 26  PSARHHDREELFPA--EQIKKLGELGLLAVTVKEEYGGSGLDYQAYAIGMEEIARGDAAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T    +++       ++                  L+E   G
Sbjct: 84  SVVMGVNNLYVGTVQQHGTEEQKQNFLEPFTQGKH-------------IAFYALSEPGNG 130

Query: 209 TDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  A ++  +   +   Y L+G K W  +S  +   ++ A ++  +    +   L    
Sbjct: 131 SDAGAASTTAKLNDETQTYLLNGTKAWISNSKEASGGLVFATIDKTLRHKGITAFLTHKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             GL   + +NK+G R+++T +L   +        L++   P    +I +  LD   + +
Sbjct: 191 VYGLSVSKKENKMGMRASSTCQLVLEDVQVPQNQILSM---PGNGFRIAMESLDCGRIGI 247

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +A+A     + Y+++R   G  L    ++++ +AD+AL +  +  L++R A   
Sbjct: 248 AAQATGIAQAALELAVDYSQKRLAFGKQLSKMQMIQQKLADMALRVETSRLLTWRAAWLK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EA+ A++ A     +C         + ++ +GG GY+ +     +YR +   
Sbjct: 308 DNGLPITKEASMAKLHASEAATYC-------AHQCIQVLGGMGYVTDMPAELYYRNARVT 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   + K
Sbjct: 361 EIYEGTSEIQRLVIAGSIIK 380


>gi|188582682|ref|YP_001926127.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179346180|gb|ACB81592.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 596

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/570 (18%), Positives = 192/570 (33%), Gaps = 65/570 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGG--ERWD-KV 97
           LL  ++A                V+     E  ++ A    P   +    G   R D  V
Sbjct: 14  LLNDVLAIHRYDNLPGFAEASPDVVEAVLGEGGKLTAEVFAPLNLSGDQEGCTRRGDGSV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A        G         F        H +  A    ++       M P +T
Sbjct: 74  ATPKGFKAAYDAYAAGGWMGLSVPEEFGGQGLP--HVLNTAMQEFISGANLALGMYPGLT 131

Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ AL    +      + PK+    +  T             + LTE   GTD+  + 
Sbjct: 132 QGAIAALLVHGSEAQKATYLPKMVEGAWTGT-------------MNLTEPHCGTDLGLLK 178

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y L+G K F+S+   D       +++A++EG       +  F+VP+ L +
Sbjct: 179 TKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVN 238

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    L++K+G   NAT  + +    G+L+G  N     +  M     L 
Sbjct: 239 EDGSLGDRNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLA 298

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +     +   A+ YAR R                  +I  P ++R +  I     
Sbjct: 299 VGVQGLGQSEAAYQNAVAYARERLQGRALTGAKAPDKAADPIIVHPDVRRTLMQIRAFNE 358

Query: 368 AATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           AA AL    A + D A    +            +M P+ K        A   EA +  GG
Sbjct: 359 AARALILWTALNSDIAHRSPDAGQRQAADDMLGLMTPVVKGVLTDRGFANAVEAQQMFGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GY+EE  +++  R++    I  G+     +D++   L + G        + ++  +   
Sbjct: 419 HGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDH 478

Query: 480 GK-KVITILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFLENR 533
           G+ + +      +    +D   A     + A      A +AA      +  +   ++  +
Sbjct: 479 GEDEAMKPFTAQLQPALDDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWGK 538

Query: 534 FLDN--CHSTHCMLHGRFNAAHIIDSLYLD 561
                           R +A  ++   +++
Sbjct: 539 IARAALARKAEGADVERMDAKLVLGRFFME 568


>gi|154687391|ref|YP_001422552.1| YusJ [Bacillus amyloliquefaciens FZB42]
 gi|154353242|gb|ABS75321.1| YusJ [Bacillus amyloliquefaciens FZB42]
          Length = 594

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/459 (17%), Positives = 161/459 (35%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDEIENHQFEHSVRLLKKAGDLGLLGADVPEEYGGIGLDKISSAFITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    T    K + P + S                     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGTEEQKKTYLPDLASG-------------QRIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + + +  G
Sbjct: 160 LGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKNYPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  +A ++  + A  +  +R    F++    
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPISSFTLTQEKLATMSARLYAMESSVYRTVGLFEDNMSR 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K    +    +  E ++  GG G+++E  + R Y
Sbjct: 336 LTEEEQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK   L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKALQEELMMLMPEEPGSEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                       +++K + R   +KIAL ++  A  + G
Sbjct: 454 -----------LEQEKYIVRQ-AKKIALLTAGLAAQKYG 480


>gi|262378977|ref|ZP_06072134.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|262300262|gb|EEY88174.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 390

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 139/379 (36%), Gaps = 23/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P   + D+    PA   L ++    GL        +    +   AH +    +   +   
Sbjct: 31  PLAAKADQDNLFPA--QLWKKMGDMGLLGMTVSEEYGGSNMGYLAHILVMEEISRASASI 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S EY                L ++E   
Sbjct: 89  GLSYGAHSNLCINQIHRHGTEAQKQRYLPKLVSGEY-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++T +  +  D         W  +   +D  ++ A+ + + G   +   L +   
Sbjct: 136 GSDVVSMTLRADQKGDRYVLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  + +  +K+G R + T  L F +        L      V+ +   +  + A++S   
Sbjct: 196 KGFSHGQHLDKLGMRGSNTYPLFFDDCEVPAENVLGGVGNGVKVLMSGLDYERAVLSGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L   + Y   R   G  L +  +M+  IAD+     A  AL + +  + D   
Sbjct: 256 LGIMDACLDIVMPYLHERKQFGQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD--- 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R++     R  A     +  + A  +  EA++ +GG+GYI + +  R +R++    I  
Sbjct: 313 -RADHGRALRKDAASAILYSAEKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + +   L   T 
Sbjct: 372 GTSEIRRMLIGRELFNETA 390


>gi|167572409|ref|ZP_02365283.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 377

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 135/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EVVAQMGELGFLGMIVPPDWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   TP   + W   + +                     LTE + 
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTPAQKERWLRDLATG-------------KTIGAFSLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   L    
Sbjct: 131 GSEAHNLRTRAE-LRDGRWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFLVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N    ++   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---VIPQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +       A  YAR R   G  + +   +   +AD+A  I AA  L+   A   
Sbjct: 247 AAQAIGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLADMATQINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|224130308|ref|XP_002194107.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Taeniopygia guttata]
          Length = 419

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 133/400 (33%), Gaps = 36/400 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   +E    A      L    P    +D+   +P    L++R+   GL  S    S  
Sbjct: 39  LTDEQKEFQATARKFA--LEEIIPVAAEYDRTGEYPV--PLIKRAWELGLMNSHIPESCG 94

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +                        +  +      V +    +  K +  ++       
Sbjct: 95  GLGLGTFEACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNEQQKKKYLGRMT------ 148

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+A I ++ ++  D         W  +   ++ + +
Sbjct: 149 -------EEPLMCAYCVTEPGAGSDVAGIRTRAERKGDEYVINGQKMWITNGGKANWYFL 201

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+ +              + + +  G+   R +  +G R + T  + F +         
Sbjct: 202 LARTDPDPRAPASKAFTGFIVEANSPGIQIGRKELNMGQRCSDTRGIVFEDVRVP---KE 258

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV        KI +          A  +V   R +L EA  YA  R   G  +++   + 
Sbjct: 259 NVLIAEGAGFKIAMGAFDKTRPPVAAGAVGLARRALDEATRYALERKTFGKPIVEHQAVA 318

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A+ +  A     R A   D  +  +         A I K +   +A  V  +A+
Sbjct: 319 FLLAEMAMKVELARLGYQRAAWEVDAGRRNT-------FYASIAKAFAGDVANQVATDAV 371

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 372 QIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRVIIAR 411


>gi|302342407|ref|YP_003806936.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639020|gb|ADK84342.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 380

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 132/361 (36%), Gaps = 26/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L++ +  +GL  S     +                     +  G  +  +      + L
Sbjct: 40  ELVKLAAENGLVGSWVPEEYGGAGAGIMGNALITEQLSRVDMGIGLNIVAATFGCEAIVL 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + +               P+ +         TE   GTD+A   ++  K   G
Sbjct: 100 YGSEEQKEQYV-------------RPVCEGKAISAGAYTEPNAGTDVAGYGTRAVKDG-G 145

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y ++G K F+++  + D F++ A             +++      G+   ++  K+G R
Sbjct: 146 DYIINGQKMFITNGTVCDFFLVQAITNPENKRHARFSQIIVPADAPGVTRTKIHGKMGIR 205

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S+ T E+ F +       L+G        +           A  ++   +  L  +  Y+
Sbjct: 206 SSNTAEISFEDVRVPQSNLVGVEGRGFYQLMHFFDTTRPMIAAQALGLSQACLDTSARYS 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V G  L    + ++ +A++A+ I A   L++R     D              +A +
Sbjct: 266 REREVFGAPLGSFQLTQKKLAEMAIRIEALRGLTYRACWLIDNGTPD-------YTLAAM 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  + A     +A+E  GG GYIEE  + + YR++    +  G+  A ++ +   + 
Sbjct: 319 AKYYGGETAVFCADKAVEIHGGYGYIEEYPVQKWYRDAKILELYEGTKEAEIMTIGGAMM 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|264679027|ref|YP_003278934.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209540|gb|ACY33638.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 596

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/504 (18%), Positives = 190/504 (37%), Gaps = 62/504 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSIH 112
              E  G        +E A++       L+      P   +   V   P +    ++   
Sbjct: 27  PGFEDAGLETAQAVLEECAKLCEGVVAPLNVPGDLNPSSFKDGVVTTTPGFADAFKQYAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRV 170
            G         F      +   I AA + ++        + P +T  ++ AL+T  +  +
Sbjct: 87  GGWQGLQHPADFGGQGLPK--TIGAACIEMLNSANLSFALCPLLTDGAIEALLTAGSDAL 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +  K+ + E+  T             + LTE + G+D+A + ++ +   DG Y + G
Sbjct: 145 KSTYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSYKVFG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+V G       +  F+VP+ L +     G  N +    
Sbjct: 192 TKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVVPKFLVNQDGSLGKRNDVHCVS 251

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +++K+G +++ T  L+F +     G+L+G+ N     +  M         +  ++    +
Sbjct: 252 IEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRGLEYMFIMMNAARYAVGLQGLAVAERA 311

Query: 332 LAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
              A+ YA+ R  S            +I  P ++R +  +        A++   A     
Sbjct: 312 YQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRMLMTMRASNEGCRAMATAAAAAYDA 371

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +   +A+ R     +   M P+ K +  +M+  V +  ++  GG G+IEE   A++YR+
Sbjct: 372 AHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRD 431

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +   +I  G+       L        G    + + + +E+   +    +I    D+    
Sbjct: 432 AKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAA----LIASGTDTAKAV 487

Query: 495 KEDKGLARFLTEKIA--LASSAAA 516
             +   AR    ++   + + A A
Sbjct: 488 ARNLAQARQAFVQVVDFIVAQAKA 511


>gi|45658958|ref|YP_003044.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602203|gb|AAS71681.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 595

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 106/521 (20%), Positives = 188/521 (36%), Gaps = 75/521 (14%)

Query: 47  IANFPSVVHKE-------LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KV 97
           +A  PS V +        LE LGE +    A           P+       G +++  KV
Sbjct: 57  LAYAPSNVEEAIEYYKSVLESLGEIMGEFVA-----------PRSKEMDQIGLKYENGKV 105

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            F  A           GL      R +  +       +++  + + A+ +A   +S    
Sbjct: 106 IFPKAQEECYNTLRDAGLMPVSLSRKYGGMGLPA--TVQSFMMEVAARADAAFCLSYGNI 163

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +           + + +A    S E        +     +  + LTE   G+D+  + ++
Sbjct: 164 NIV--------EIMERYA----SSEMCEKWIPEISAGKYSAAMALTEPNYGSDLPNVQTR 211

Query: 218 GQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
             + ++GI+ ++G K F++            + LA+      G   +   L  GS   + 
Sbjct: 212 ATQDANGIWRINGAKRFITHACGYINAPSVILTLARTGSPESGARGLSFFLVKGS--DVH 269

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRV 330
              +++K+G   + T E+ F N+ G L+G            M     L  A  S+     
Sbjct: 270 IAGVEHKLGLHCSPTCEVVFDNSPGELIGKTGYGLVKYSMGMMNAARLTIATQSLGIATA 329

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------- 381
           +  EA  YA  R   G  +   P +++ +  +  +I A   L      + D         
Sbjct: 330 AYYEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHL 389

Query: 382 ---EAKSRSE---------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              E KS  E             A +  P++KY+  +   A+ ++A++  GGSGY E+  
Sbjct: 390 IKIEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYD 449

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-----GSSGKKVI 484
           +AR YR+S   +I  G+    ++  +  +  G +   QL    E +L         KKV 
Sbjct: 450 VARIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVW 509

Query: 485 TILRDSISLCKED------KGLARFLTEKIALASSAAALYR 519
             L  SI L K          LA  + E  A       L +
Sbjct: 510 KDLDTSIGLYKSIHNGDLRDSLAFEVVEIAARFLCGLLLEK 550


>gi|311069796|ref|YP_003974719.1| FAD dependent acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
 gi|310870313|gb|ADP33788.1| FAD dependent acyl-CoA dehydrogenase [Bacillus atrophaeus 1942]
          Length = 594

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/459 (17%), Positives = 164/459 (35%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LL+++   GL  +     F  +   +         +  A   +   
Sbjct: 53  VDEIENHQFEHSVRLLKKAGDLGLLGADVPEEFGGIGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    T +  + + P + S              +      LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGTQKQKETYLPDLASG-------------NKFAAYALTEPSSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+++G          + +    G
Sbjct: 160 RGAKTTAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKIDGDK----FSAFIVEKDYPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G +    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHIIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  IA +A  + A  +  +R    F+E    
Sbjct: 276 ASKRIIELSAAYANQRRQFNTPISSFALTQEKIATMASKLYAMESSVYRTVGLFEENMSV 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 LTEEDQKDGRQVAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     + V            L L EK   L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRMIVPSTFLKKAIKGELPLFEKAQALQEELMMLMPEEPGS---- 451

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                       +++K + R   +KIAL ++  A  + G
Sbjct: 452 ---------GALEQEKYIVRQ-AKKIALLTAGLAAQKYG 480


>gi|194290930|ref|YP_002006837.1| isovaleryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224765|emb|CAQ70776.1| Isovaleryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 395

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 156/412 (37%), Gaps = 26/412 (6%)

Query: 59  ELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
             L ++ LS   +E+   A  +   +L    P  +  D+  +      L+      G   
Sbjct: 3   TSLSQFELSPEQREIYEQAFRFARAELAPLLPRMD--DEDWYPE---TLMPMLGAAGYLG 57

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAP 176
                 +                +      AG +  P      + +    T    + + P
Sbjct: 58  ITAPPEYGGSGMDLFSAGMVGEAFGYWNANAGFIWGPHENLCLNNILRNGTDEQKRRYLP 117

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFL 235
           K+ S E+                L LTE   G+D + ++ +  ++  D  Y L+G K F+
Sbjct: 118 KLCSGEW-------------VGALALTEPGAGSDALGSMRTAARRDGDH-YVLNGRKMFI 163

Query: 236 SSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           S+  ++D  ++ A+ E  +G   +   + +    G    +  NK+G R   T EL F   
Sbjct: 164 SNGPVADVVLVYAKTEPTLGAKGISAFIVEKGFPGFSVAQKLNKMGWRGAPTGELVFDEC 223

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+G  N     V     +     A+  +   +  L  ++ YA  R   G  +  
Sbjct: 224 RVPARNLVGGENRGVAVVMSGLDIERAFLALSCIGSAQRCLDLSLEYASTRQQFGKPIES 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+ +++ AA AL++R   + ++ +           +   +     +M  +V
Sbjct: 284 FQLVQAMLADMFVELEAARALAYRALMACNDLERGGGGRGDIHKLCAASILKVAEMLLSV 343

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +A++  GGSG+I E  + RHYR +   +I  G+     L +   L + T+
Sbjct: 344 TDKAVQIHGGSGFIWETEVNRHYRNAKLATIGGGTSEVRRLIIAEELLRATH 395


>gi|294828426|ref|NP_714108.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|293386280|gb|AAN51126.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 106/521 (20%), Positives = 188/521 (36%), Gaps = 75/521 (14%)

Query: 47  IANFPSVVHKE-------LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KV 97
           +A  PS V +        LE LGE +    A           P+       G +++  KV
Sbjct: 48  LAYAPSNVEEAIEYYKSVLESLGEIMGEFVA-----------PRSKEMDQIGLKYENGKV 96

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            F  A           GL      R +  +       +++  + + A+ +A   +S    
Sbjct: 97  IFPKAQEECYNTLRDAGLMPVSLSRKYGGMGLPA--TVQSFMMEVAARADAAFCLSYGNI 154

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +           + + +A    S E        +     +  + LTE   G+D+  + ++
Sbjct: 155 NIV--------EIMERYA----SSEMCEKWIPEISAGKYSAAMALTEPNYGSDLPNVQTR 202

Query: 218 GQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
             + ++GI+ ++G K F++            + LA+      G   +   L  GS   + 
Sbjct: 203 ATQDANGIWRINGAKRFITHACGYINAPSVILTLARTGSPESGARGLSFFLVKGS--DVH 260

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRV 330
              +++K+G   + T E+ F N+ G L+G            M     L  A  S+     
Sbjct: 261 IAGVEHKLGLHCSPTCEVVFDNSPGELIGKTGYGLVKYSMGMMNAARLTIATQSLGIATA 320

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------- 381
           +  EA  YA  R   G  +   P +++ +  +  +I A   L      + D         
Sbjct: 321 AYYEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHL 380

Query: 382 ---EAKSRSE---------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              E KS  E             A +  P++KY+  +   A+ ++A++  GGSGY E+  
Sbjct: 381 IKIEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYD 440

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-----GSSGKKVI 484
           +AR YR+S   +I  G+    ++  +  +  G +   QL    E +L         KKV 
Sbjct: 441 VARIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVW 500

Query: 485 TILRDSISLCKED------KGLARFLTEKIALASSAAALYR 519
             L  SI L K          LA  + E  A       L +
Sbjct: 501 KDLDTSIGLYKSIHNGDLRDSLAFEVVEIAARFLCGLLLEK 541


>gi|159045625|ref|YP_001534419.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter
           shibae DFL 12]
 gi|157913385|gb|ABV94818.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter
           shibae DFL 12]
          Length = 571

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/502 (18%), Positives = 178/502 (35%), Gaps = 57/502 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +       L R  + +  +L      G     V   P +    R     G      D 
Sbjct: 45  AKLCEGELAPLQRAGDLHPARLE----NGV----VRTSPGFAEGYRAIAAGGWVGMSADP 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           ++  +    A       +   A L        +      +    +  +   + P++ S +
Sbjct: 97  AYGGMGLPMALATCMNEMMSSACLSLQIAPMMTQGQIEALEAHASDALKALYLPRLTSGD 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE + G+D+ A+T++     DG Y ++G K ++S   +D 
Sbjct: 157 WVGT-------------MNLTEPQAGSDVGALTTKAVPKGDGTYAITGQKIYISWGDNDF 203

Query: 243 -----FIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA+  +G  G   +   L            G  N L    L++K+G   + T
Sbjct: 204 TGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGNPGVANALKVVSLEHKLGLHGSPT 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +++    G+L+G  +     +  M     L   +  +     +   A+ +AR R    
Sbjct: 264 AVMQYEGATGWLVGPEHGGMRAMFTMMNNARLGVGVQGIGVAEAAYQHALAHARDRKQGQ 323

Query: 347 GILID------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMAP 398
             + D         ++R +  +  ++ AA A++   A + D   +   E  AA A ++ P
Sbjct: 324 TPVADADSILAHADVRRMVMTMRAEVFAARAIALSTAVATDMHHATGAESWAARAALLTP 383

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NL 457
           I K +       V    ++  GG G IEE   A++ R+    +I  G+     +D++   
Sbjct: 384 ICKAYGTDTGIRVADLGLQVHGGMGVIEETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRK 443

Query: 458 LEKGTNLFEQLFSTLEQ----------DLGSSGKKVITILRDSI-SLCKEDKGLARFLTE 506
           L  G     +L   +E           +L     +    LR++  +L  E +  ARF   
Sbjct: 444 LADGGEAMSRLLDEIEALAESARGSLPELAEPVWQACETLRETTEALVAETRLNARFGGA 503

Query: 507 KIALASSAAALYRAGMNDIADV 528
           +  L ++A  L        A  
Sbjct: 504 QPYLMAAARVLGGHAHLAAAIA 525


>gi|184159533|ref|YP_001847872.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183211127|gb|ACC58525.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322509443|gb|ADX04897.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519464|gb|ADX93845.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 387

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 144/395 (36%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEMTPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  +    +  +     P I S E      
Sbjct: 69  DPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQHFGSEELKARVLPGIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    LK K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++     V   EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E     +   + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQPKLQGPE---LVVQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|327439092|dbj|BAK15457.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 594

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 97/529 (18%), Positives = 181/529 (34%), Gaps = 81/529 (15%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H   H   LL+ +   GL  +     +E +   +      A     A   +   
Sbjct: 53  VENLEHHEFEHSVRLLKTAGDLGLLAADVPEEYEGLGLDKISSALIAEKMSPAGGFSITH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L         + PK+ S              ++     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGNHEQKTKYLPKLASG-------------ALIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +    G  Y L+G K W  ++  +D F++ A+++G          + + S  G
Sbjct: 160 LGAKTTAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGDK----FTAFIVERSFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G +S++T  L   +    +   L  V  G +    IL        + +V 
Sbjct: 216 VSVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGEVGRGHIIAFNILNIGRYKLGVGTVG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             + +   A+ Y  +R      L +  + K  IA +A  I A+ +L++R    F++    
Sbjct: 276 ASKRAFELAVAYTNQRQQFKTKLSNFNLTKEKIASMASHIYASESLNYRTVGYFEDRLSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    KS +   A   I   I K +  +    V  EA++  GG G++ E  + R Y
Sbjct: 336 LSDEEQKDGKSIAAAIAEYAIECSIAKVFGSETLDFVADEAVQLHGGYGFMAEYEVERIY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSG-- 480
           R+S  N I  G+     + V            L LL+    L  +L   + +++G     
Sbjct: 396 RDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQELQNELLMLMPEEIGQGALE 455

Query: 481 ---------------------KKVITILRDSISLCKEDKGLARFL-TEKIALASSAAALY 518
                                ++    L     L      +A  L   + A+  +  A+ 
Sbjct: 456 QEKYLVKNAKKIAVLAAGAAAQRYGAKLDAEQELLVNIANIANQLYAMESAVIRTQKAIE 515

Query: 519 RAGMNDIA------DVFLENRFLDNCHSTHCMLHGRF---NAAHIIDSL 558
           R G    A       +F +  F +        L       +A  I+ +L
Sbjct: 516 RDGEEKAAQKILYTQIFCQEAFAEIEKEAKETLIASVEGDDARMILSAL 564


>gi|85703226|ref|ZP_01034330.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672154|gb|EAQ27011.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 387

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 140/401 (34%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D+    P  +AL R     GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQERVKPMAAEVDRSNAFP--NALWREMGDLGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  T      + P + S ++  
Sbjct: 67  AGMSYLAHVIAVEEIARASASVSLSYGAHSNLCVNQIKLNGTAEQKAKYLPGLVSGQH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMKLRAEKRNDHYKLNGSKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+     G   +   L + +  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTNPDAGSKGITAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVDVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GRGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYLAERKQFGQAIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G++ +  +AR +R++    I  G+     + V   L     
Sbjct: 347 GFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMGAMG 387


>gi|291279846|ref|YP_003496681.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
 gi|290754548|dbj|BAI80925.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1]
          Length = 592

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 87/484 (17%), Positives = 167/484 (34%), Gaps = 45/484 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P L       + +D V  H      +++    GL        +  +   +A  +  
Sbjct: 44  NEVLPDLEEID--NQNFDLVVKH------MKKCGELGLLMIDAPEEYGGLDLDKATSMLV 95

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A     A   +    + +      +    T      +  KI + E+              
Sbjct: 96  AEKIAPAGSFSVAYAAHTGIGTLPLIYYGTKEQKDKYLEKIITGEW-------------L 142

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +      DG  Y L+G K F+++   +D F + A+V+     
Sbjct: 143 AAYCLTEPGSGSDALGAKATATLSEDGKYYILNGTKQFITNAGFADLFTVFAKVDKEH-- 200

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 L + +  G+     + K+G + ++T ++  +N    +   L  +  G      I
Sbjct: 201 --FTAFLVERTFEGVELGPEEKKMGIKGSSTRQVILNNCKVPVENLLGEIGKGHKIAFNI 258

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L               + +LAE I YA  R   G  +     +K  ++D+   I A+ + 
Sbjct: 259 LNVGRFKLGAAVTGAAKFALAEGIKYANERKQFGRQISSFGAIKEKVSDMVAHIFASESA 318

Query: 373 SFRLANSFDEAKSRSEEAAYARIM------------APITKYWCCKMAPAVIAEAMECIG 420
            +RLA   D+  +  +++A                   ITK +  ++   V+ E ++  G
Sbjct: 319 IYRLAGLIDDRIATIDKSAENYYELYQKAIEEYAIECSITKVFPSEVLAKVVDEVVQIFG 378

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSS 479
           G G+I+E    R YR+   N I  G+     L +   LL++             + + + 
Sbjct: 379 GYGFIQEYPAERFYRDERINRIFEGTNEINRLLIPGMLLKRAMKGQLPFQQEAMKAVDAL 438

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
                  + DS+   +E   L    T  + +A +AA  Y   +    ++ +     D   
Sbjct: 439 MTPSFDEIDDSVPFAQEKYTLQNLKTLFLVVAGAAAQKYMDKLVHQQELLIA--LADIAI 496

Query: 540 STHC 543
               
Sbjct: 497 QIFA 500


>gi|307306781|ref|ZP_07586522.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|306902072|gb|EFN32670.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 387

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 146/402 (36%), Gaps = 34/402 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L      L         +     P  +  D+    P   +L R     GL     D +
Sbjct: 8   FALGEEIDALRASVRRFASE--RIAPLADDADRSNAFPM--SLWREMGELGLLGITADEA 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    AH +    +   +        + S    + +     P     + PK+ S E
Sbjct: 64  HGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGKPAQKSRYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++  +  K  D         W  + P +D 
Sbjct: 124 H-------------VGALAMSEPGAGSDVVSMKLKADKRGDRYVLNGSKMWITNGPDADV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   L + +  G       +K+G R + T EL F++       + 
Sbjct: 171 LVVYAKTDPAAGPRGITAFLVEKAFPGFSAGHKLDKLGMRGSNTSELIFTDCEVP---EE 227

Query: 303 NVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G  E +K+L+  LD   + +S      M   L   + Y   R   G  + +  +M+
Sbjct: 228 NVLGGVGEGVKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + + AA A  + +A + D  ++  ++AA           +  + A A+  EA+
Sbjct: 288 GKLADMYVTMNAARAYVYAVAAACDRGETARKDAAG-------CILYAAEKATAMALEAI 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 341 QALGGNGYTNDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|33598606|ref|NP_886249.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574735|emb|CAE39394.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 382

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 129/362 (35%), Gaps = 25/362 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVA 163
            +++     GL        +  +      ++R              L   ++      + 
Sbjct: 39  EIVQEMRDLGLFGLSIAADYGGLGLTMEEEVRVVFELGQTSPAFRSLAGANIGIGSQSIV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E             +     LTE   G+D  A+ +   +  D
Sbjct: 99  LAGTDDQRQRYLPKLASGE-------------LIGSFALTEPDAGSDAMALRTSAVRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+         +   L +    G+   +   K+G   
Sbjct: 146 HYVLNGTKRFITNAPVAGLFSVMARTAPERRADSISCFLVEAGTPGVTLGKPDKKMGQAG 205

Query: 284 NATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F N        L     TG    M++L    L  A + V      + +A+ YA
Sbjct: 206 ALTCDVVFDNCRVPAEALLGGKEGTGFRTSMRVLDKGRLHIAALCVGIAERLVRDAVRYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD   ++ AA ++    A   D  ++ + E       A  
Sbjct: 266 LERKQFGQPIAEFQLVQAMIADSQTELYAARSMVLDAARKRDLGQNVTME-------AVC 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +K +  +M   V   A++  GG+GYI E ++ R YR+     I  G+     L +     
Sbjct: 319 SKLYATEMVGRVADRAVQIHGGAGYISEYAVERFYRDVRLFRIFEGTSQIQQLVIARETL 378

Query: 460 KG 461
           K 
Sbjct: 379 KA 380


>gi|299530009|ref|ZP_07043436.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298721989|gb|EFI62919.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 596

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 90/489 (18%), Positives = 184/489 (37%), Gaps = 60/489 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSIH 112
              E  G        +E A++       L+      P   +   V   P +    ++   
Sbjct: 27  PGFEDAGLETAQAVLEECAKLCEGVVAPLNVPGDVNPSSFKDGVVTTTPGFADAFKQYAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRV 170
            G         F      +   I AA + ++        + P +T  ++ AL+T  +  +
Sbjct: 87  GGWQGLQHPADFGGQGLPK--TIGAACIEMLNSANLSFALCPLLTDGAIEALLTAGSDEL 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +  K+ + E+  T             + LTE + G+D+A + ++ +   DG Y + G
Sbjct: 145 KSTYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSYKVFG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+V G       +  F+VP+ L +     G  N +    
Sbjct: 192 TKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVVPKFLVNQDGSLGKRNDVHCVS 251

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +++K+G +++ T  L+F +     G+L+G+ N     +  M         +  ++    S
Sbjct: 252 IEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRGLEYMFIMMNAARYAVGLQGLAVAERS 311

Query: 332 LAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLA----- 377
              A+ YA+ R  S            +I  P ++R +  +        A++   A     
Sbjct: 312 YQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRMLMTMRASNEGCRAMATTAAAAYDA 371

Query: 378 -NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +   +A+ R     +   M P+ K +  +M+  V +  ++  GG G+IEE   A++YR+
Sbjct: 372 AHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRD 431

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +   +I  G+       L        G    + + + +E+   +    +I    D+    
Sbjct: 432 AKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAA----LIASGTDTAKAV 487

Query: 495 KEDKGLARF 503
             +   AR 
Sbjct: 488 ARNLAQARQ 496


>gi|16264448|ref|NP_437240.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium
           meliloti 1021]
 gi|15140585|emb|CAC49100.1| putative isovaleryl-CoA dehydrogenase protein [Sinorhizobium
           meliloti 1021]
          Length = 387

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 147/402 (36%), Gaps = 34/402 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L      L         +     P  +  D+    P   +L R     GL     D +
Sbjct: 8   FALGEEIDALRASVRRFASE--RIAPLADDADRSNAFPM--SLWREMGELGLLGITADEA 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    AH +    +   +        + S    + +     P     + PK+ S E
Sbjct: 64  HGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGKPAQKSRYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++  +  K  D         W  + P +D 
Sbjct: 124 H-------------VGALAMSEPGAGSDVVSMKLKADKRGDRYVLNGSKMWITNGPDADV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   L + +  G    +  +K+G R + T EL F++       + 
Sbjct: 171 LVVYAKTDPAAGPRGITAFLVEKAFPGFSAGQKLDKLGMRGSNTSELIFTDCEVP---EE 227

Query: 303 NVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G  E +K+L+  LD   + +S      M   L   + Y   R   G  + +  +M+
Sbjct: 228 NVLGGVGEGVKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ + + AA A  + +A + D  ++  ++AA           +  + A A+  EA+
Sbjct: 288 GKLADMYVTMNAARAYVYAVAAACDRGETARKDAAG-------CILYAAEKATAMALEAI 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 341 QALGGNGYTNDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|194366550|ref|YP_002029160.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349354|gb|ACF52477.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 596

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 82/509 (16%), Positives = 170/509 (33%), Gaps = 65/509 (12%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----KV 97
           L  ++   P             V+    +E  R +      L++     G   D    +V
Sbjct: 15  LHDVLKVEPLFARLGFTDATADVVDAVLEEAGRFSATVLAPLNSVGDEIGCVLDQASGEV 74

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P +     + +  G                    +    +   A L  G+    S  
Sbjct: 75  TTPPGFKQAYDQFVDGGWTGLTAAPELGGQGLPHTLGVPLNEMINAANLAWGNFPLLSHG 134

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +        H+ +   +    +  T             + LTE   GTD+  + ++
Sbjct: 135 AIEALKQHGEAWQHEAFLKPLIEGRWTGT-------------MCLTEPHCGTDLGLLKTK 181

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +  +DG Y ++G K F+++   D       ++LA++         +  F+ P+   D  
Sbjct: 182 AEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPPGAKGISLFVTPKFKVDRD 241

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L   
Sbjct: 242 GNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQPHKGLQAMFTMMNTARLGVG 301

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAA 369
           +  +     +   A+ Y+R R  S               ++  P ++R +  I   +  +
Sbjct: 302 LQGIGLSERAYQNALKYSRERLQSRSLSGAKFPDKPADPILVHPDVRRMLLTIKSLVEGS 361

Query: 370 TALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             L+   A      +  D+A  R         + PI+K    +        A++C GG G
Sbjct: 362 RLLALHAATLIDVAHHADDAAERERADTLVSFLTPISKACQTEWGIENTYNALQCFGGHG 421

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
           YI E  + +  R++   ++  G+     LD++                     G+  K +
Sbjct: 422 YIREHGMEQLARDARITTLYEGTTGIQALDLIG-------------RKTASSQGAGLKLM 468

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALAS 512
           +  +       + ++ LA F+    A A+
Sbjct: 469 LAEIEAFAKANEGNEALAEFIGPLRAKAA 497


>gi|322705526|gb|EFY97111.1| isovaleryl-CoA dehydrogenase IvdA, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 401

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 145/391 (37%), Gaps = 38/391 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F +   +EL+ L E V   T +E+      +T             DK    P  + +  +
Sbjct: 45  FEAPTTEELDELRERVHEFTRREITEEVAAHT-------------DKSNAFP--NEMWPK 89

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      D     +    QAH +    +   +        + S    + + L  +P
Sbjct: 90  LGEAGFLGITADEDVGGLGMGYQAHAVVMEEMSRASGSIGLSYAAHSQLCVNQLQLNGSP 149

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K + P + +              +    L ++E   G+D+ ++ +  +K+  G    
Sbjct: 150 EQKKKYLPGLIAG-------------TKIGALAMSESGSGSDVVSMRTSAKKVDGGYLLN 196

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E   G   +   L +   +G    R  +K+G R + T E
Sbjct: 197 GSKMWITNGPDADLIVVYAKTEPDKGSKGITAFLVETKADGFSCARKLDKMGMRGSNTGE 256

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N F     ++G +N     + +   L  L  +   +  M+ +L  A+ ++ +R   
Sbjct: 257 LMFDNVFVPEDNVVGSVNGGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQF 316

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD+   + A+ A ++  A   D      E+             +  
Sbjct: 317 GSPIAHNQLVQGKLADMYTKLQASRAYTYATARQVD------EQGVIRTQDCAGAILYAA 370

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + A     + ++ +GG GY+EE   +R  RE
Sbjct: 371 ERATECALDCIQLLGGMGYVEEMPASRLLRE 401


>gi|262198653|ref|YP_003269862.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262082000|gb|ACY17969.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 381

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 126/389 (32%), Gaps = 36/389 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A    PQ   +   G     +     W    R++   G  C               H  
Sbjct: 21  LAREVVPQQERWREQG-----IVEREVW----RKAGRQGYLCPWLAEEDGGPGGDFLHST 71

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                          +   S      +         K W P   S               
Sbjct: 72  VVMEELARIYETGFMMSLHSDVVVPYIHTFGDAEQRKRWLPGCVSG-------------D 118

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVG 254
           +   + +TE   G+D+AA+ +   +  D  Y ++G K F+S+ +    ++LA + +    
Sbjct: 119 LVSAVAMTEPDTGSDLAALRTTAVRDGDE-YVINGAKTFISNGILCDLVVLAAKTDPDPA 177

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPV 309
                +   + +    G    R   K+G  S  T EL F +        LG+       +
Sbjct: 178 NAHKGISLFVVEADRAGFIKGRKLAKMGMASQDTAELSFEDCRVPASNRLGEEGGGFRAL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M     L  AI + +     LA+ + YA  R   G  +      +  +A+ A  +   
Sbjct: 238 MTMLQQERLTVAISAQAQAEQVLADTLAYAAERKAFGRPISKFQNTQFKLAECATKVEVG 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   RL       +   +E         + K W  +MA  V+   ++  GG GY+ E  
Sbjct: 298 RAFLDRLLGDHVAGEELVKE-------CSMAKLWQTEMASEVVDTCLQFFGGYGYMLEYP 350

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           +AR Y ++    I  G+   M + +   +
Sbjct: 351 VARAYMDARVQRIYAGTSEIMKVIIAKRM 379


>gi|228990463|ref|ZP_04150428.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
 gi|228768989|gb|EEM17587.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM
           12442]
          Length = 405

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 133/383 (34%), Gaps = 37/383 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N   P +  +   G    K+    A    +   I +       D +   +V ++  +  
Sbjct: 21  DNEIIPYIKEWDEKGHFEQKILKRLAELQFMGVCIPEQYGGVGMDYNTLAIVCEELERGD 80

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A  +  A      L S ++          T    + +                  K   
Sbjct: 81  TA--FRTAVSVHTGLNSMTLLQ------WGTEEQKQKYLVSQ-------------AKGEK 119

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
               GLTE   G+D+ A+ +   K  D         W     ++D F++ A+    +   
Sbjct: 120 IGAFGLTEPNAGSDVVAMQTTAVKQGDHYVLNGSKTWISLCDVADHFLIFAKTNPELKHR 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
            +   + + +  G+  + +K K+G R+  T E+             N+     E  KI +
Sbjct: 180 GISCFIVERTFPGVSTKAIKGKLGIRAGNTGEVFLDEVKVPA---ENLLGEEGEGFKIAM 236

Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             LD+   +V+     L +A     + Y   R   G  +    ++++ IA ++ ++  + 
Sbjct: 237 ASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSANLEISR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++     +E K  + E + A+ +A       C  A     +A++  G  GY  E  +
Sbjct: 297 LLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGYSNEFPV 349

Query: 431 ARHYRESPANSILLGSGNAMVLD 453
            R+ R + A  I  G+     + 
Sbjct: 350 ERYLRNAKAPVIYEGTREIHTIM 372


>gi|313108038|ref|ZP_07794204.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310880706|gb|EFQ39300.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 406

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 148/396 (37%), Gaps = 26/396 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R       +     P  ++W+K    P  H + R++   GL        F  
Sbjct: 24  TQEHEELRRTVRSFVER--EINPNVDQWEKDGRFP-IHEIFRKAGELGLLGISKPEKFGG 80

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDP 185
           +    ++ I AA        E G +    +  A  V   M TP + +       S E   
Sbjct: 81  MGLDYSYSIVAAE-------EFGSITCGGIPMAIGVQTDMCTPALARFG-----SDELRE 128

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P     +   +G++E   G+D+A + +  +K  D         W  +SP +D   +
Sbjct: 129 EFLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFMCL 188

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
           LA             ++      G+      +K+G RS+ T ++ F N        +   
Sbjct: 189 LANTSDDKPHVNKSLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIGAE 248

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A++
Sbjct: 249 GAGFMMQMLQFQEERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEM 308

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL ++    + + +  +        +A + K    ++   V    ++  GG 
Sbjct: 309 MTEVEALRALVYQATELYVKGRDVTR-------LASMAKLKAGRLGREVSDACLQYWGGM 361

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ +  ++R YR++   SI  G+   M+  +  L+
Sbjct: 362 GFMWDNPVSRAYRDTRLVSIGGGADEIMLGIICKLM 397


>gi|169634306|ref|YP_001708042.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           SDF]
 gi|169153098|emb|CAP02168.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii]
          Length = 407

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 138/378 (36%), Gaps = 27/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
            P    WD+ E  P    L +++   GL    +   +  +          A + +     
Sbjct: 48  TPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGS 105

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +      A  +    +  +     P I S E                 L +TE 
Sbjct: 106 GGVHISLMVHTIGAPPIQHFGSEELKARVLPGIISGE-------------KISALAITEP 152

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLE 263
            GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL 
Sbjct: 153 GGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLI 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G+    LK K+G  ++ T  L F         LLG  N     + +   +     
Sbjct: 212 DAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFL 270

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +++     V   EA+ + ++R   G  LID  V++  + D+A  + +  AL    A   
Sbjct: 271 GVVAYGYALVCYEEALEWVQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKM 330

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K +  E         + K    +        A++ +GG G++      R YRE   N
Sbjct: 331 TQPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVN 387

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 388 MIGGGAEEIMKDLISKQL 405


>gi|260558135|ref|ZP_05830345.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408408|gb|EEX01716.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 407

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 139/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +      
Sbjct: 49  PFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGSG 106

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P I S E                 L +TE  
Sbjct: 107 GVHISLMVHTIGAPPIQHFGSEELKARVLPGIISGE-------------KISALAITEPG 153

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 154 GGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLID 212

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 213 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFLG 271

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    
Sbjct: 272 VVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMT 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K +  E         + K    +        A++ +GG G++      R YRE   N 
Sbjct: 332 QPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 388

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 389 IGGGAEEIMKDLISKQL 405


>gi|190575228|ref|YP_001973073.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013150|emb|CAQ46782.1| putative acyl-CoA dehydrogenase oxidoreductase protein
           [Stenotrophomonas maltophilia K279a]
          Length = 596

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 79/502 (15%), Positives = 166/502 (33%), Gaps = 65/502 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----K 96
            L  ++   P             V+    +E  R +      L++     G   D    +
Sbjct: 14  ALHDVLKVEPLFARLGFTDATADVVDAVLEEAGRFSATVLAPLNSVGDEIGCVLDQATGE 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +     + +  G                    +    +   A L  G+    S 
Sbjct: 74  VTTPPGFKQAYDQFVDGGWTGLTASPELGGQGLPHTLGVPLNEMINAANLAWGNFPLLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +        H+ +   +    +  T             + LTE   GTD+  + +
Sbjct: 134 GAIEALKQHGEAWQHEAFLKPLIEGRWTGT-------------MCLTEPHCGTDLGLLKT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           + +  +DG Y ++G K F+++   D       ++LA++         +  F+ P+   D 
Sbjct: 181 KAEPNADGSYSITGTKIFITAGEHDLTENIVHLVLAKLPDAPPGAKGISLFVTPKFKVDR 240

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L  
Sbjct: 241 EGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQPHKGLQAMFTMMNTARLGV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +     +   A+ Y+R R  S               ++  P ++R +  +   +  
Sbjct: 301 GLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPADPILVHPDVRRMLLTVKSLVEG 360

Query: 369 ATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +  L+   A   D A    + A           + PI+K    +        A++C GG 
Sbjct: 361 SRLLALHAATLIDIAHHAEDAAERERADTLVSFLTPISKACQTEWGIENTYNALQCFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GYI E  + +  R++   ++  G+     LD++                     G+  K 
Sbjct: 421 GYIREHGMEQLARDARITTLYEGTTGIQALDLIG-------------RKTASSQGAGLKL 467

Query: 483 VITILRDSISLCKEDKGLARFL 504
           ++  +       + ++ LA F+
Sbjct: 468 MLAEIEAFAKEHEGNEALAEFI 489


>gi|115360517|ref|YP_777654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115285845|gb|ABI91320.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 596

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 96/507 (18%), Positives = 192/507 (37%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDK 96
           +L  L            E  G        +E A+        L      G+R      D 
Sbjct: 13  VLKELAGIDTVAQLPGFEEAGYDTAQAVLEESAKFCGE---VLAPLNVEGDRNPSSWKDG 69

Query: 97  VEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           V    P + A  R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVTATPGFGAAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S  +   DG Y + G K F++    D       ++LA+          +  F+VP+ +
Sbjct: 175 VRSHAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFM 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
              A AL++       +A+   +  +R+   A    + P+ K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L  G  + + L + +   + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIGDTVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + GK        + S+  + +  AR L
Sbjct: 475 ALGKLDGA---AAASMKAQLEKGARAL 498


>gi|311746770|ref|ZP_07720555.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578449|gb|EAZ82613.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 385

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 109/310 (35%), Gaps = 25/310 (8%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T      + PK+ S ++                + +TE   G+D+  I
Sbjct: 97  SDIVMPYILHYGTESAQSKYIPKMVSGDF-------------IGAIAMTEPGAGSDLQGI 143

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +      D  Y ++G K F+++   SD  ++  + +   G   +  L+ D    G    
Sbjct: 144 LTSAVDQGDH-YLVNGTKTFITNGYLSDVVVVAVKTDPNKGAKGISLLIIDKDMKGFTRG 202

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +   K+G  +  T EL F +       LLG+       +        L  ++ +V+    
Sbjct: 203 KPFQKVGLHAQDTCELFFEDVIVPKENLLGNEGEGFKYLMTELAQERLVVSLAAVALGEY 262

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L   + Y + R      L +    +  +A++   +         L    ++    S   
Sbjct: 263 MLEATVDYVKTRKAFKKSLSEFQNTRFKLAEMTAALEQGRIYCDHLVQLHNQGLLDSA-- 320

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                MA   KY   ++   V  E ++  GG GY+ +  +AR Y ++    I  G+   M
Sbjct: 321 -----MASAAKYNMTELQCKVADECVQLHGGYGYMWDYGVARAYADARVQRIYAGTNEIM 375

Query: 451 VLDVLNLLEK 460
              +   + K
Sbjct: 376 KELIARKILK 385


>gi|120610844|ref|YP_970522.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589308|gb|ABM32748.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 597

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 94/498 (18%), Positives = 189/498 (37%), Gaps = 60/498 (12%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRR 109
                 E  G        +E AR        L+      P   +  +V   P +    R+
Sbjct: 24  AALPGFEEAGLDTAQAVLEECARFNEGVVAPLNVAGDRNPSSWKDGQVTTTPGFKDAFRQ 83

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167
               G         F      +   I AA   ++        + P +T  ++ AL+T  +
Sbjct: 84  FAEGGWQGLQHPVDFGGQGLPK--TIGAACAEMLNSANMSFALCPLLTDGAIEALITAGS 141

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +   +  K+ + E+  T             + LTE + G+D+A + ++ +   DG Y 
Sbjct: 142 DALKTTYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGTYK 188

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           + G K F++    D       ++LA+V G       +  F+VP+ L +     G+ N + 
Sbjct: 189 VFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVVPKFLVNADGSLGARNDVQ 248

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              +++K+G +++ T  L+F +     G+L+G+ N     +  M         +  ++  
Sbjct: 249 CVSIEHKLGIKASPTAVLQFGDAGGAVGYLVGEENRGLEYMFIMMNAARYAVGLQGIAVA 308

Query: 329 RVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +  +A+ YAR R  S            +I  P ++R +  +        A++   A +
Sbjct: 309 ERAYQQAVQYARDRVQSRPVDGSLPGSAPIIHHPDVRRMLMTMRALTEGCRAMASVAAAA 368

Query: 380 F------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +       +A  R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+H
Sbjct: 369 YDAAHHHPDAGVRKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQH 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL------FSTLEQDLGSSGKKVITIL 487
           YR++    I  G+      D++            L       +T ++   +   +   + 
Sbjct: 429 YRDARILPIYEGTTAIQANDLVGRKTARDGAATALGVAAQARATADELRAAGTPEAGAVA 488

Query: 488 RDSISLCKEDKGLARFLT 505
           +     C   + +ARF+ 
Sbjct: 489 KRLAEACGAFEEVARFIA 506


>gi|268531350|ref|XP_002630801.1| Hypothetical protein CBG02501 [Caenorhabditis briggsae]
 gi|187037359|emb|CAP24025.1| hypothetical protein CBG_02501 [Caenorhabditis briggsae AF16]
          Length = 410

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 123/381 (32%), Gaps = 34/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++DK    P    ++R++   G    I    +        + +             
Sbjct: 44  PNASKYDKSGEFP--WEIVRQAHSLGFMNPIIPEKYGGPGMGGLNSVLIVEALSYGCTGI 101

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V L  T    K +   + S              +      +TE   G
Sbjct: 102 QLAIVGPSLAVAPVYLAGTEEQKKKYLGMMASE-------------ATIASYAVTEPGAG 148

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV---GCFLVPRLLEDG 265
           +D+  + ++  +  D         W      +  F +LA+ +              L DG
Sbjct: 149 SDVNGVKTKAVQKGDEYVINGSKAWITGGGHAKWFFVLARTDENPNTPAGKAFTAFLVDG 208

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G+   + +  +G + + T  + F +         N+   P    K+ +         
Sbjct: 209 DTPGITRGKKEENMGQKCSDTRTITFEDVRVP---KENILGAPGAGFKVAMGAFDLTRPL 265

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V      L E+  YA  R+  G  + +   ++  +AD+ +++  +   ++R A  
Sbjct: 266 VAAGAVGLSWRCLDESCKYALERNAFGTPIANHQAIQFMLADMTVNLELSRLYTYRAAAE 325

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A    A A +  GG+G+  +  + +  R++  
Sbjct: 326 TDAGGVSS-------YSASIAKCFSADTANIAAANACQIFGGAGFNCDYPVEKLMRDAKI 378

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L +
Sbjct: 379 YQIYEGTSQIQRMVISRTLLQ 399


>gi|321477254|gb|EFX88213.1| hypothetical protein DAPPUDRAFT_187305 [Daphnia pulex]
          Length = 404

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 131/375 (34%), Gaps = 36/375 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+      W  +L  +          D     + R  A     A       +  
Sbjct: 61  PHMAEWDEKHH---WDLVLFTARE--------DYGGTGLSRLDASITFEALS--QGCVST 107

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+       + K W P++ S E                   LTE   G
Sbjct: 108 TAYISIHNMCAWMIDKFGREDLRKTWIPQLASME-------------KLASYCLTEPGAG 154

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  ++ +  +K  + +       +      +D ++++ +  G  G   +  +L +    
Sbjct: 155 SDAGSLNTTAKKSGNDLILNGSKAFISGGGDTDVYLIMCRT-GEPGPKGISCVLVEKGTP 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL + + + KIG  S  T  +   +    +   +G                 ++ A  S+
Sbjct: 214 GLSFGKKEKKIGWNSQPTRAVILEDCRVPISNIIGKEGQGFSIAMKGLNGGRVNIASCSL 273

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + SL  +  + + R   G  L D    +  +A +A  + A+  +    A + +E+  
Sbjct: 274 GAAQASLEISADHLKVRKQFGKPLADFQHSQFQMARMATKLVASRMMIRNAATALEESHP 333

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     +  + K +  +    ++  A++  GG GY+++ ++ ++ R+   + IL G
Sbjct: 334 ND------VTLCSMAKLYATEACFEIVNTALQLHGGYGYLKDYAVQQYLRDIRVHLILEG 387

Query: 446 SGNAMVLDVLNLLEK 460
           +   M + +   + K
Sbjct: 388 TNEVMQMVIAKDILK 402


>gi|302560528|ref|ZP_07312870.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302478146|gb|EFL41239.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 386

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 148/403 (36%), Gaps = 35/403 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS    EL R          A+     +  D  E H   + ++R     GL    +   +
Sbjct: 5   LSPELDELRRTVEEF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEY 59

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +     A  +    L  +    A  L +     A  V L  T    ++W P++ S E 
Sbjct: 60  GGMGGDYFALGVALEELARVDSSVAITLEAGVSLGAMPVHLFGTEEQKREWLPRLCSGE- 118

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD- 241
                       +    GLTE  GG+D  A  +  +       + ++G K F+++  +D 
Sbjct: 119 ------------ILGAFGLTEPDGGSDAGATRTTARLDESTDEWVINGGKCFITNSGTDI 166

Query: 242 -AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
              + +  V GR   G  L+  ++      G       +K+G  ++ T EL F +     
Sbjct: 167 TGLVTVTAVTGRKPDGKPLISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFQDVRVPA 226

Query: 299 LGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G  + ++IL    +  A +     +  + E++ YA+ RH  G  +     +
Sbjct: 227 ANLLGEQGRGYAQFLRILDEGRIAIAALGTGLAQGCVDESVKYAKERHAFGRPIGANQAI 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ +    A       A+     +   +EAA A       K +   +A     +A
Sbjct: 287 QFKIADMEMKAHTARLAWRDAASRLVAGEPFKKEAALA-------KLYSSTVAVDNARDA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 340 TQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|225851565|ref|YP_002731798.1| isovaleryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|265999703|ref|ZP_05467458.2| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225639930|gb|ACN99843.1| isovaleryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263095410|gb|EEZ19011.1| isovaleryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 392

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 135/402 (33%), Gaps = 28/402 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+  +    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVFMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
               V  +   +  +  +++   +  M   L   + Y   R      + +  +M+  +AD
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEFQLMQCKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   A+ A  + +A + D  ++  ++AA           +  + A  +  +A++ +GG
Sbjct: 298 MYVTFNASRAYVYAVAAACDRGETTRKDAAG-------CILYSAENATQMALQAIQSLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +GYI +    R  R++    I  G+     + +   L + T 
Sbjct: 351 NGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFQETR 392


>gi|126734643|ref|ZP_01750389.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126715198|gb|EBA12063.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 568

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/472 (20%), Positives = 183/472 (38%), Gaps = 49/472 (10%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G  +       L R  + +   L            V   P +    +     G       
Sbjct: 44  GAKMCEEILAPLNRAGDLHPAHLEN--------GIVRTSPGFAEGYQAIAEGGWIGMSAS 95

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIF 179
           +    +       +  A   +MA       +SP +T   + AL    +  + + + PK+ 
Sbjct: 96  QEVGGLGLP--MTLTTALNDMMASACLSLQLSPLMTQGQIEALEHHASDAIKELYIPKMI 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE + G+D+ A+ S+ +   DG Y ++G K ++S   
Sbjct: 154 SGEWSGT-------------MNLTEPQAGSDVGALRSKAEPNGDGTYAITGQKIYISWAD 200

Query: 240 SDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
           +D       ++LA++         +  F+VP+L+ D     G+ N L    L++K+G   
Sbjct: 201 NDFTQNVCHLVLARLPDGVPGTKGISLFMVPKLIPDADGNPGAKNDLRVVSLEHKMGLHG 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           + T  +E++   G+L+G  +     +  M     L   +  V     +L  A+ YA+ R 
Sbjct: 261 SPTAVMEYAGAKGWLVGREHGGMAAMFTMMNNARLGVGVQGVGAAEGALQHALAYAKDRK 320

Query: 344 VSG-----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--AYARIM 396
                   G +ID   ++R +  +  D  AA A++   A + D A +  +E   A A  +
Sbjct: 321 QGKTSGITGTIIDHADVRRMLTTMKADTYAARAITLMNAVAIDMAHASGDEGWKARAAFL 380

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VL 455
            PI+K +   +   V A  ++  GG G++EE   A++ R+    +I  G+     +D V 
Sbjct: 381 TPISKAFGSDVGCEVSATGIQVHGGMGFVEETGAAQYARDVRVTTIYEGTNGIQAMDLVA 440

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             L  G     ++   +EQ   ++      +        +  +    +L  +
Sbjct: 441 RKLMDGGEAAFRILEEIEQGAEAAKATHPELAEAVWQSAESLRETTEWLVAQ 492


>gi|332850446|ref|ZP_08432766.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332871897|ref|ZP_08440309.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332875167|ref|ZP_08443000.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332730717|gb|EGJ62028.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332731111|gb|EGJ62412.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332736611|gb|EGJ67605.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 394

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 134/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 34  EHIAPHYDQWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 91

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 92  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 138

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 139 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 197

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 198 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 257

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 258 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 317

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 318 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 370

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 371 IQRIYGGTNEIMKEIVARGL 390


>gi|308474991|ref|XP_003099715.1| CRE-ACDH-1 protein [Caenorhabditis remanei]
 gi|308266370|gb|EFP10323.1| CRE-ACDH-1 protein [Caenorhabditis remanei]
          Length = 432

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 126/371 (33%), Gaps = 46/371 (12%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---------S 160
           +  +GL        +            +     M  +E      PSV++          S
Sbjct: 90  AFENGLMGVHVPEEYGGSG--------STFFDAMIVIEELAKTDPSVSAMVGIHNTLPVS 141

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    T      + P + S                     ++E   G+D  A+ +  +K
Sbjct: 142 MIVEHGTEEQKHRYLPDLCS--------------ESLASFCISESGAGSDAFALKTAAKK 187

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +S  +  F++ A  +       +   + +    GL   R ++K+G
Sbjct: 188 DGDDFLISGSKMWITNSGEAQVFVVFANADPSQKYKGITCFIVERGAEGLTVDREEDKLG 247

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI--- 336
            R+++T ++ F N          +     +  K  I  L++  +++    + LA+     
Sbjct: 248 IRASSTCQVHFDNVRVHKSA---ILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQ 304

Query: 337 --HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              Y ++R   G  LID   ++  IA +  +I AA  L +  A   +       EAA A+
Sbjct: 305 TIPYLQQREQFGKRLIDFQGLQHQIAQVRTEIEAARLLVYNAARMKEYGIPYVREAAMAK 364

Query: 395 IMAPITKYWC-CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           + A    Y         +     + +     + E    + YR++    I  G+ N  +  
Sbjct: 365 LFASQVIYLNHFSPNYPISRWPPQHL-----LNEFPAEKFYRDAMIGEIYEGTSNIQLNT 419

Query: 454 VLNLLEKGTNL 464
           +  L++    L
Sbjct: 420 IAKLIDNEYKL 430


>gi|284041703|ref|YP_003392043.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283945924|gb|ADB48668.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 382

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 148/378 (39%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+ +  P  + ++RR     L    +            A+ I    L  +    
Sbjct: 26  PVAEELDRTKAFP--YDIVRRLGELNLMGIPFPEEVGGAGADTLAYAIAVEELARIDSSV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L + +      + L  +    +DW P++ + E                  GLTE   
Sbjct: 84  AITLCAHTSLGTQPIYLFGSEEQKRDWLPRLTAGE-------------RLGAFGLTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLE 263
           G+D   + ++     +G + ++G K F+++  +D     ++ A       G   +  +L 
Sbjct: 131 GSDAGNVQTRATLD-NGEWVVNGAKQFITNAGTDISGCVVITAVTGTDDRGRKEISNILV 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G        K+G  ++ T  L F++        +     G  + +++L    +  
Sbjct: 190 PNGTPGYEQGTPYRKMGWNASDTRPLTFTDCRVPEDQLVGPRGAGFKQFLRVLDIGRIGV 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A M V   + +L EA+ Y++ R   G  +     ++  +AD+A ++AAA  L++  A   
Sbjct: 250 AAMGVGLAQGALDEAVKYSKERKAFGQPISKFQAIQGKLADVATELAAARLLTYNAAFLK 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S  AA A++          ++A     EA++  GG GYIEE  + R YR++   
Sbjct: 310 DRGRDFSLTAAQAKLKTG-------RLAVRASEEAVQIHGGYGYIEEYPVCRFYRDAKIL 362

Query: 441 SILLGSGNAMVLDVLNLL 458
           +I  G+     + +   L
Sbjct: 363 TIGEGTDEVQQMVIARAL 380


>gi|126729532|ref|ZP_01745345.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126709651|gb|EBA08704.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 386

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 145/405 (35%), Gaps = 37/405 (9%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  L       A+      P   A        D V     W  +       GL   
Sbjct: 10  LGEDVHALREMVHRWAQ--ERVKPMAAAIDR-----DNVFPPELWPEM----GELGLLGV 58

Query: 119 IWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
             + ++        AH +    +   +   +    + +    + + L  +    + + P 
Sbjct: 59  TVEEAYGGAGMGYLAHTVVVEEIARASASVSLSYGAHANLCVNQIRLNGSEEQKRTYLPG 118

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S              +    L ++E   G+D+ ++  + +K +D         W  + 
Sbjct: 119 LISG-------------AHVGALAMSEPSAGSDVVSMKLRAEKRNDRYVLNGNKYWITNG 165

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P +D  ++ A+ +   G   +   L + S  G       +K+G R + T EL F +    
Sbjct: 166 PDADTLVVYAKTDPDAGPKGITAFLVEKSMKGFSTSPHFDKLGMRGSNTAELIFEDVEVP 225

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG        +        +  A + +  M   + E + Y R RH  G  +    +
Sbjct: 226 FENVLGQEGKGVRVLMSGLDYERVVLAGIGLGIMAACMDEIMPYLRDRHQFGKPIGSFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  IAD+   + +A A  + +A + D  +    +AA           +  + A     +
Sbjct: 286 MQGKIADMYTAMNSARAYVYEVAKACDRGEVTRADAA-------ACCLYASEEAMKQAHQ 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           A++ +GG+G++ + ++AR +R++    I  G+     + V   L 
Sbjct: 339 AVQAMGGAGFLNDAAVARIFRDAKLMEIGAGTSEIRRMLVGRELM 383


>gi|71905742|ref|YP_283329.1| isovaleryl-CoA dehydrogenase [Dechloromonas aromatica RCB]
 gi|71845363|gb|AAZ44859.1| isovaleryl-CoA dehydrogenase [Dechloromonas aromatica RCB]
          Length = 390

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 129/374 (34%), Gaps = 23/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    PA   L ++    GL        +    +   AH +    +   +   
Sbjct: 31  PRAAEIDRANEFPA--DLWKKFGDMGLLGMTAGEEYGGTNMGYLAHIVALEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S E+                L ++E   
Sbjct: 89  GLSYGAHSNLCVNQIRRNGTEAQRQKYLPKLISGEH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K  D         W  +   +D  ++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLKAEKKGDRYVLNGSKMWITNGGDADTLVVYAKTDLNAGAKGMTAFIVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F +        L       + +   +  + A++    
Sbjct: 196 KGFTHGTHLDKLGMRGSNTFPLFFDDCEVPEENVLGGVGNGTKVLMSGLDYERAVLCGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   +   + Y   R   G  + +  +M+  +AD+     A  A  + +  + D   
Sbjct: 256 LGIMAACMDVVVPYLHERKQFGQAIGEFQLMQGKVADLYSTWQATRAYVYAVGRACDA-- 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++ +   R  A     +  + A  +  EA++ +GG GY  E    R +R++    I  
Sbjct: 314 --TDHSRTLRKDAAGAILYSAEKATWMAGEAIQTLGGVGYTNEYPTGRLWRDAKLYEIGA 371

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 372 GTSEIRRMLIGREL 385


>gi|120612726|ref|YP_972404.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120591190|gb|ABM34630.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 601

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 90/476 (18%), Positives = 164/476 (34%), Gaps = 64/476 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G      D  +          +      ++        M P 
Sbjct: 74  EVTTPKGFKDAYAQYVEGGWAALSCDPEYGGQGLP--FVVNQCLYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    T    K + PK+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISD---GIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED 264
           + ++ + ++    G Y ++G+K F+S+   D       ++LA+  +   G   +   +  
Sbjct: 179 LRTRAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISLFVVP 238

Query: 265 ----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
                     G  N +    L++K+G   NAT ++      G L+G  +     +  M  
Sbjct: 239 KYKVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQPHKGLQAMFVMMN 298

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADI 362
              L     S+    V+   A+ YA+ R                  +I  P +++ +   
Sbjct: 299 AARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVHPDVRKMLLTA 358

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAM 416
                 A AL        D+A S  +E           ++ PI K +            M
Sbjct: 359 KAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITDNGHISTNACM 418

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFST 471
           +  GG G+I+E  + +  R++  N I  G+     LD+L     G N      F +L   
Sbjct: 419 QVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGATLKKFGKLVGK 478

Query: 472 LEQDLGSSGKKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
           L ++ G + K       I  L D ++    + G   F       A++   L  AG 
Sbjct: 479 LVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGH 534


>gi|218295367|ref|ZP_03496180.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243999|gb|EED10525.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 378

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 141/358 (39%), Gaps = 37/358 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTT 167
           +G+    +   F P     A     A + L+ ++     +   ++    + L       T
Sbjct: 39  EGMARLGFLGVFVPEELGGAGLDFWAYIALLEEMGGYASLRSVLSVQQSLVLTPLLAYGT 98

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + P++   E             V     LTE   G+D  ++ ++  +  D  Y 
Sbjct: 99  EAQKERYVPRLARGE-------------VLGAYALTEPEAGSDAGSLKTRAYRDGD-FYV 144

Query: 228 LSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L G K F+S   +++ FI+ A+ +   G   +   L +   +G+    LK K+G R+  T
Sbjct: 145 LEGQKTFISHANVAEVFIVFAKTDPDQGSKGISAFLVERQ-DGVRTTPLKGKLGLRAADT 203

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYAR 340
             +         +    +     E  KI +       +  A  +V  M+ +L  ++ Y +
Sbjct: 204 GMVFLDGVR---IPRDRLLGQEGEGFKIALSTLDTGRISLAAGAVGLMQRALDLSLAYVK 260

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  +A++ LD+ A+  L+++        +  + EA+ A       
Sbjct: 261 ERRQFGRPIASFQLIQEKLAEMKLDLEASRLLTYQAVWKKLSGERYTLEASMA------- 313

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V   A++  GG G+ EE  +AR YR++   ++  G+     L +   L
Sbjct: 314 KLFASEAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEIQKLVIGAHL 371


>gi|194901832|ref|XP_001980455.1| GG17152 [Drosophila erecta]
 gi|190652158|gb|EDV49413.1| GG17152 [Drosophila erecta]
          Length = 415

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 135/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +PA    +RR    GL        +                        
Sbjct: 58  PKARHHDREELYPA--EQVRRLGELGLMSVAVREEYGGSGLDYQAYAIGMEEVARGDAAV 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T +  +++               P  +        L+E   G
Sbjct: 116 SIVMGVNNLYLGAVQQHGTEQQKQEFL-------------LPYTQGDHIAFYALSEPGNG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  +   I+ A V+  +    +   L      
Sbjct: 163 SDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITAFLTPKDVP 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G R+ +T +L   +          V   P +  KI +  LD   + ++ 
Sbjct: 223 GLTIAKKESKMGMRATSTCQLVLEDVQVPRS---RVLGAPGDGFKIAMQSLDCGRIGIAA 279

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D 
Sbjct: 280 QATGIAQAALELAVDYSQKRVAFGKQLARMQLIQQKLADMATRVETSRLLTWRAAWLKDN 339

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A+++A     +C         + ++ +GG GY  +     +YR +    I
Sbjct: 340 GLPITKEAAMAKLLASEAATYC-------AHQCIQVLGGMGYTIDLPAELYYRNARVTEI 392

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N + +
Sbjct: 393 YEGTSEIQRIVIANAVLR 410


>gi|124002490|ref|ZP_01687343.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
 gi|123992319|gb|EAY31687.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina
           ATCC 23134]
          Length = 385

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 140/391 (35%), Gaps = 35/391 (8%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A++   ++  +    E+ D +    +W  L      +G        ++  +  +   + 
Sbjct: 20  LADFVAQEITPHNAQWEK-DHMVSRESWLKL----GENGFLGMQVPEAYGGLGIED-FRY 73

Query: 136 RAARLYLMAQLEAGH--LMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            A    ++AQ       +  P         +    +    + + PK  S E         
Sbjct: 74  NAIFTEVIAQSGCAGPAVGYPLHNDIVLPYILEYGSEETKQKYLPKTVSGE--------- 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVE 250
                 + + +TE   G+D+ ++ +  +   D  Y ++G K F+++      +++A + +
Sbjct: 125 ----SILAIAMTEPGAGSDLQSMRATAEDKGDH-YLVNGSKTFITNGYLADLVVVAVKTD 179

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
              G      LL + +  G    +   K+G  +  T EL F N       LLG+     G
Sbjct: 180 PAQGAKGTSLLLMEAAAEGFSKGKPFEKVGLHAQDTCELFFDNVKVPKENLLGEEGKGFG 239

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + +      L   + ++     +L   I Y + R   G  +      K  +A++A ++ 
Sbjct: 240 YLMNKLAQERLVVGLGAIGAAEKALETTIQYTKERKAFGKSVAQFQNTKYKMAELATEVQ 299

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                +       DE K            A + KYW   +   V  E ++  GG GYI +
Sbjct: 300 IGRVFADYCTELHDEGK-------LDGATASMVKYWLTDLQCKVADECVQLHGGYGYIWD 352

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             IAR Y ++    I  G+   M   +   +
Sbjct: 353 YQIARSYADARVQRIYAGTNEIMKELISRKI 383


>gi|90075810|dbj|BAE87585.1| unnamed protein product [Macaca fascicularis]
          Length = 563

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 164/483 (33%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  M       L
Sbjct: 85  RKIDQEGKIPD--ETLEKLKSLGLFGLQVPEEYGGLGLSNTMYSRLGEIISMDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A++ S+     D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 190 ASVQSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVE 248

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPVENILGEVGGGFKVAMNI---LNSGRF 305

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  A 
Sbjct: 306 SMGSAVAGMLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAG 365

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GG GY ++    R  R++ 
Sbjct: 366 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTKDYPYERILRDTR 420

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVI-TILRDSISLCKE 496
              I  G+   + + + L  L+    +        +Q   ++  + I   LRDS+    +
Sbjct: 421 ILLIFEGTNEILRMYIALTGLQHAGRILTARIREFKQAKVTTVMETIGRKLRDSLGRTVD 480

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +LA SA                 L R G     +  +  R  +   + 
Sbjct: 481 LGLTGNHGVVHPSLADSANKFEENTYYFGQTVETLLLRFGKTITEEQLVLKRVANILINL 540

Query: 542 HCM 544
           + M
Sbjct: 541 YGM 543


>gi|296479444|gb|DAA21559.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 416

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 63  PHMAEWDQKELFPV--DTMRKAAQLGFGGVYVQTDVGGAGLSRLDTSVIFEALATGCTST 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS       ++    +        P + + E                   LTE   G
Sbjct: 121 TAYMSIHNMCVWIIDRFGSEEQRHRLCPPLCTME-------------KFASYCLTEPGSG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +   +  D  Y L+G K F+S    +D ++++ +  G  G   +  ++ +   
Sbjct: 168 SDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRT-GGPGPRGISCVVVEKGT 225

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 226 PGLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCS 285

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  Y + R   G  L +   ++  +AD+A  + A+  +    A +     
Sbjct: 286 LGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAARLVASRLMIRTAATAL---- 341

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A ++  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 342 --QEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 399

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 400 GSNEVMRMLISRSLLQ 415


>gi|297699858|ref|XP_002826989.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Pongo abelii]
          Length = 580

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 77/416 (18%), Positives = 157/416 (37%), Gaps = 56/416 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 113 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 159

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 160 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 219

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 220 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 276

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 277 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 334

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 335 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 390

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISLCK-------- 495
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 391 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 449

Query: 496 -EDKGLARFL-----TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             D  L+  L      E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 450 HPDPALSPSLQAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 504


>gi|319787394|ref|YP_004146869.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465906|gb|ADV27638.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 382

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 153/408 (37%), Gaps = 46/408 (11%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           E +L+ + V    AQE+        P    +   GE        P     +R    +GL 
Sbjct: 7   EEQLMLQDVARRIAQEVIA------PSAEHFDRNGE-------FPL--DNIRLLGENGLM 51

Query: 117 CSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                  +        A+ +    +       +  +   +    + +         + + 
Sbjct: 52  GIEVPAEYGGAGMDPVAYALAMIEIAAGDAAHSTIMSVNNSLFCTGILKNGNEEQKQLYV 111

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234
                          + +        LTE + G+D + +  +  +  DG Y ++G K W 
Sbjct: 112 -------------RAVAEGREIGAFALTEPQSGSDASNMRCRAVRQDDGSYVINGKKSWI 158

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            S P++   I+ A      G   +   + D S  G    + + K+G R++AT E+EF++ 
Sbjct: 159 TSGPVARYIILFAVTNPEQGSRGITAFMIDTSREGFHRGKTEPKLGIRASATCEIEFAD- 217

Query: 295 FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGI 348
             ++     V     +  KI +  LD+  + ++   + +A A +     Y R R   G  
Sbjct: 218 --YVARPEEVVGVEGQGFKIAMSVLDAGRIGIASQAIGIARAAYEKTIEYVRERKAFGSP 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    + +  IAD+   + AA  L+ R A    + K  S EAA A++ A        + A
Sbjct: 276 IGTFQMTQAKIADMKCKLDAALLLTLRAAWLKGQGKPFSAEAAIAKLTA-------SEAA 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +  +A++  GG GY +E  + R++R++    I  G+     L +  
Sbjct: 329 MWITHQAVQIHGGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|110680588|ref|YP_683595.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           denitrificans OCh 114]
 gi|109456704|gb|ABG32909.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           denitrificans OCh 114]
          Length = 564

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 87/461 (18%), Positives = 167/461 (36%), Gaps = 36/461 (7%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDG 114
            E     V      E  ++ +     L         R +   V   P + A  +     G
Sbjct: 29  FEAASPDVTQAVLVEAGKLCDEVLAPLQRVGDVNPARLENGVVRTPPGFDAAWKAIAQGG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                 D  F  +    A       +   A L        +      +    +  +   +
Sbjct: 89  WVGMAADPEFGGMALPMAVTSAVNEMMSGACLSLQIAPLMAQGQIEALEHHASDEIKALY 148

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ + E+                + LTE + G+D+ A++S+ Q   DG Y ++G K +
Sbjct: 149 LPKLIAGEW-------------TATMNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIY 195

Query: 235 LSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S    D       ++LA++         +  FLVP+ + +     G+ N +    L++K
Sbjct: 196 ISWGDHDVADNICHLVLARLPDAPAGTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHK 255

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   + T  +++    G+L+G        +  M     L            +   A+ Y
Sbjct: 256 LGLHGSPTAVMQYDGATGWLVGAKEGGMAAMFTMMNNARLGVGGQGTGVAEAAYQHALSY 315

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIM 396
           AR R      ++D   ++R +  +  DI AA A+    A + D A +   ++  A A ++
Sbjct: 316 ARERKQGKSAIVDHADVRRMLGTMKADIYAARAIGLSCAVAIDMAHATGSADWQARAALL 375

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VL 455
            PI K +      AV    ++  GG G++EE   A++ R+    +I  G+     +D V 
Sbjct: 376 TPIAKAFGSDTGIAVADAGIQVHGGMGFVEETGAAQYSRDVRVTAIYEGTNGIQAMDLVA 435

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             +        +L   +E       K  +  L +++    E
Sbjct: 436 RKMADNGEAAHRLLDEIEA-CAEHAKTTLPELAEAVWQASE 475


>gi|229026467|ref|ZP_04182824.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1272]
 gi|228734930|gb|EEL85568.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1272]
          Length = 608

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKEYPGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|325968201|ref|YP_004244393.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
 gi|323707404|gb|ADY00891.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia
           768-28]
          Length = 402

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 152/405 (37%), Gaps = 31/405 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +L  TA+E A+     +P+L         ++K E  P    L +++   GL        +
Sbjct: 17  LLRKTAREYAQ--RNFSPEL------AREYEKKEEFP--WDLYKKAGELGLLAPSIPTDY 66

Query: 125 EPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                      I      + A+   G  +     ++ M+    T    K + P       
Sbjct: 67  GGGGFTTYIADIVVTEELVRAEPTLGLAIMAGPFTSHMLYFFGTEEQRKKYLP------- 119

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+ +         TE   GTDI  + +  +K  D         +  ++P +   
Sbjct: 120 ------PVYRGENTFFGAYTEPEHGTDITQLNTVAEKKGDKYIIRGMKTFITNAPTAKYG 173

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++LAQ E           +      G+  +RL  K+G R+    E+   N        L 
Sbjct: 174 LLLAQTEPEKRHRGQTLFIIHTDWPGITIRRLTGKMGQRTIPVGEIYLDNVEVPAENVLG 233

Query: 304 VSTGPVEDMK-------ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                +            +  +  A + +     +  +A+ YA++R+  G  LI+  +++
Sbjct: 234 GEEKGLNQGFYWTLAYFNVSRIGVATLGLGIALAAFDKALEYAQKRNQFGQPLINFEMIQ 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A+ I AA +L +R A   D+      +      +A   K +  ++A  V+ EA+
Sbjct: 294 EKLARMAMLIEAARSLIYRAAYYVDDYLKFKIDPRAMGAIAGAAKVYGTEVANYVVDEAI 353

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG GY EE  + R++R+     I  G+    +L + + L +G
Sbjct: 354 QIHGGYGYFEEFDVERYWRDHRVTRIYEGTNEINLLTISDALRRG 398


>gi|311106012|ref|YP_003978865.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760701|gb|ADP16150.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 384

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 76/406 (18%), Positives = 135/406 (33%), Gaps = 28/406 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  L+   +  A+ A           P   RWD     P       R+   G        
Sbjct: 2   DLELTDEQRAFAQAARDYAE--GELAPNAARWDAEGIFP--REAFARAGEMGFCAIYASE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +                    ++    +  MV     P + + W P + S  
Sbjct: 58  DIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMVGNWGQPALREAWGPLLASG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D A+++++ Q+  D         +      +D 
Sbjct: 117 ------------QKLASYCLTEPGAGSDAASLSTRAQRQGDDYILNGAKAFISGGGDTDL 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+  G  G   +          G+ Y R + K+G  S +T  + F N        L
Sbjct: 165 LVVMARTGGE-GAGGISAFAVPADSEGIGYGRKEEKMGWNSQSTRPITFENVRVPAANML 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    MK L    ++ A  SV   + +L  A  Y   R      L +   ++  +
Sbjct: 224 GQEGEGFKIAMKGLDGGRINIATCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA  +    A   D           A     + K +   M   +  +A +  
Sbjct: 284 ADMATHLVAARQMVRLAACKLDAGAPD------AATYCAMAKRFATDMGFQICLDAQQIH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
           GG GY+ +  + R  R++  + IL G+   M + +   LLEKG ++
Sbjct: 338 GGYGYLRDYPLERLVRDTRVHQILEGTNEIMRVIIARQLLEKGADI 383


>gi|108755231|emb|CAK32551.1| Acyl-CoA dehydrogenase [uncultured organism]
          Length = 390

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 137/390 (35%), Gaps = 38/390 (9%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P    L       GL     +            H +    +   
Sbjct: 30  EKIAPRAAEIDRSNEFP--RDLWPELGALGLLGVTVEEELGGAGMGYLEHCVAMEEISRA 87

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S E+                L ++
Sbjct: 88  SASVGLSYGAHSNLCVNQIRRNGNEAQKRRYLPKLISGEH-------------VGALAMS 134

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ A+ ++ +K  D         W  + P ++  ++ A+ +   G   +   L 
Sbjct: 135 EPGAGSDVVAMKTRAEKRGDRYVLNGNKMWITNGPDAEVLVVYAKTDPEAGARGITAFLI 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
           +    G    +  +K+G R + T EL F +       + NV  G  + + IL+  LD   
Sbjct: 195 EKGMAGFSTAQKLDKLGMRGSNTCELVFEDCEVP---EENVLGGVGKGVAILMSGLDYER 251

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +S   + + +A       Y   R   G  +    +M+  +AD+   + A+ A  + +A
Sbjct: 252 VVLSAGPLGIMQACMDLVLPYVHERKQFGQAIGTFQLMQGKLADMYTTMNASKAYVYAVA 311

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D   +  ++AA A         +  + A  +  EA++ +G  GY+ E +  R  R++
Sbjct: 312 RACDRGATARKDAAGA-------ILYAAERATWMALEAIQAMGAMGYVNETAAGRLLRDA 364

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
               I  G+              G  +FE+
Sbjct: 365 KLYEIGAGTSEI------RRWLIGREIFEE 388


>gi|15598085|ref|NP_251579.1| citronellyl-CoA dehydrogenase involved in catabolism of citronellol
           [Pseudomonas aeruginosa PAO1]
 gi|107102438|ref|ZP_01366356.1| hypothetical protein PaerPA_01003500 [Pseudomonas aeruginosa PACS2]
 gi|116050892|ref|YP_790285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890912|ref|YP_002439778.1| putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa LESB58]
 gi|254235876|ref|ZP_04929199.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719]
 gi|254241554|ref|ZP_04934876.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192]
 gi|296388624|ref|ZP_06878099.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|9948980|gb|AAG06277.1|AE004715_3 putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa PAO1]
 gi|115586113|gb|ABJ12128.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167807|gb|EAZ53318.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719]
 gi|126194932|gb|EAZ58995.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192]
 gi|218771137|emb|CAW26902.1| putative citronellyl-CoA dehydrogenase involved in catabolism of
           citronellol [Pseudomonas aeruginosa LESB58]
          Length = 386

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 148/396 (37%), Gaps = 26/396 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R       +     P  ++W+K    P  H + R++   GL        F  
Sbjct: 4   TQEHEELRRTVRSFVER--EINPNVDQWEKDGRFP-IHEIFRKAGELGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDP 185
           +    ++ I AA        E G +    +  A  V   M TP + +       S E   
Sbjct: 61  MGLDYSYSIVAAE-------EFGSITCGGIPMAIGVQTDMCTPALARFG-----SDELRE 108

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P     +   +G++E   G+D+A + +  +K  D         W  +SP +D   +
Sbjct: 109 EFLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFMCL 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
           LA             ++      G+      +K+G RS+ T ++ F N        +   
Sbjct: 169 LANTSDDKPHVNKSLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIGAE 228

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A++
Sbjct: 229 GAGFMMQMLQFQEERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL ++    + + +  +        +A + K    ++   V    ++  GG 
Sbjct: 289 MTEVEALRALVYQATELYVKGRDVTR-------LASMAKLKAGRLGREVSDACLQYWGGM 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ +  ++R YR++   SI  G+   M+  +  L+
Sbjct: 342 GFMWDNPVSRAYRDTRLVSIGGGADEIMLGIICKLM 377


>gi|217969181|ref|YP_002354415.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506508|gb|ACK53519.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 393

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 135/377 (35%), Gaps = 26/377 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+V   PA   L ++    G+H       +    +   AH +    +   +   
Sbjct: 31  PRAAEIDRVNEFPA--DLWKKLGDLGVHGMTVSEEYGGTDMGYLAHIVAMEEISRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    T    + + PK+ S ++                L ++E   
Sbjct: 89  GLSYGAHSNLCINQIRRNGTEAQKQKYLPKLISGDH-------------VGALAMSEPNA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  +  +  D         W  +   +D  ++ A+ +   G   +   + +   
Sbjct: 136 GSDVVSMKLRADRKGDRFILNGSKMWITNGGDADTLVVYAKTDIAAGPKGITAFIIEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G  +    +K+G R + T  L F +        L         +++L+  LD     +S
Sbjct: 196 KGFSHGTHLDKLGMRGSNTFPLFFDDVEVPAENVLGGEANIGRGVQVLMSGLDYERAVLS 255

Query: 327 G-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G     M   +   + Y   R      + +  +M+  +AD+    +A  A ++ +  + D
Sbjct: 256 GGPLGIMAACMDVVVPYLHERKQFDTPIGEFQLMQGKVADLYSTWSACRAYAYAVGQACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R++ A   R  A     +  + A  +  EA++ +GG GY  E +  R +R++    
Sbjct: 316 ----RTDHARTLRKDAAGVILYTAEKATWMAGEAIQTLGGVGYTNEYATGRLWRDAKLYE 371

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 372 IGAGTSEIRRMLIGREL 388


>gi|229193284|ref|ZP_04320235.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 10876]
 gi|228590261|gb|EEK48129.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 10876]
          Length = 600

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|289580495|ref|YP_003478961.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289530048|gb|ADD04399.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 377

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 138/378 (36%), Gaps = 39/378 (10%)

Query: 92  ERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              D+ +  P   W  L        L        +  +   +              L   
Sbjct: 27  HEADESQTFPEDVWDELADL----DLTGLTVPEEYGGMDVDEITYSIVNEELAYGHLAVA 82

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +S    + S +    T    ++W P++ S                     L+E   G+
Sbjct: 83  TALSVHCLATSCIREFGTDDHREEWLPEMVSG-------------RPVGAFALSEPDAGS 129

Query: 210 DIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPRLLEDGSP 267
           + A +T++ +     G Y ++G K ++++      ++  A+ + R     V + L     
Sbjct: 130 NPAEMTTEAKLDEGAGEYVINGKKQWITNGERAGVVVLFAKTD-RDDPNTVTQFLVPKDT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVS 326
           +G+   + ++K+G R++ T  L F +        L  V +G      IL       ++++
Sbjct: 189 DGVEVGKKEDKLGLRASDTTTLIFDDVRIPAENRLTEVGSGLKAAFSILTG---GRIAIA 245

Query: 327 GMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V +A+A   A       R   G  +I+   +   +AD+  D+ AA  L+   A   +
Sbjct: 246 SQAVGVAQAALDAATAYANEREQFGQPIIEHQAIGHKLADMQTDVQAARLLTRDAARKNE 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +              A + KY+  + A  V  EA++  GG GY ++  + R+YR++   +
Sbjct: 306 DGVD--------PTAAAMAKYFASEAAVDVANEAVQVHGGYGYTKDFDVERYYRDAKITT 357

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+       +   L+
Sbjct: 358 IYEGTSEIQKKIIARDLK 375


>gi|239817373|ref|YP_002946283.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239803950|gb|ACS21017.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 589

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 100/519 (19%), Positives = 186/519 (35%), Gaps = 68/519 (13%)

Query: 54  VHKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERW--DKVEFHPAWHALLRRS 110
                  + E +     +E AR  A    P        G R+   +V   P + A  +  
Sbjct: 26  ALAPFAEVDEALQQQVLEEAARFVAEAVAPINRGGDETGCRFANGEVATPPGFRAAYQAF 85

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP 168
           +  G                    + A     ++    G  M+P +   +   L    + 
Sbjct: 86  VDGGWPSLSAAPEDGGQGLPT--VLEAILYEWLSAANHGLTMAPGLLHGAYACLKHHGSD 143

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   +  KI + E+                + LTE   G+D+  + ++    +DG   +
Sbjct: 144 ELKALYLSKIATGEW-------------LATMCLTEAHAGSDLGQVRTRATAQADGSLRV 190

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLEDGSPNGLCYQ 273
           +G K F+S    D       ++L ++ G           +   LVP+LL DG+ N +  +
Sbjct: 191 NGGKIFISGGEHDLTPNIVHLVLCRMHGSEVQAPAGPKGLSLVLVPKLLPDGTRNAVHCE 250

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           R++ K+G   + T  + F +  G+L+G+       +  M     L  A+  +  +  +  
Sbjct: 251 RIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNAARLHVALQGIGLLDAAWQ 310

Query: 334 EAIHYARRRHVSGGI--------------LIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A  YA  R                    + + P ++R +      I  A  L++R A  
Sbjct: 311 KADAYAAERRQMRAPGTVPASRGSEAADLIAEHPAIRRILDTQRAWIDGARTLAYRSALM 370

Query: 380 FD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D      +AK+R     +  ++ P+ K  C + A    +E ++  GG GY+ E  I + 
Sbjct: 371 LDVAAHDADAKARERAQRWCSLVTPVLKAACTQQAFHGASECLQVFGGHGYVREWGIEQI 430

Query: 434 YRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++    I  G+       L V  +L  G      +   L   L +S      + R   
Sbjct: 431 VRDARVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRDALDASRDADADVQRRLA 490

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            L        R+L   IA+A+ A  +      ++AD +L
Sbjct: 491 QL--------RYLGTTIAMAAQANPVL---PYEVADAYL 518


>gi|121608205|ref|YP_996012.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552845|gb|ABM56994.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 598

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 87/452 (19%), Positives = 158/452 (34%), Gaps = 62/452 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +     + +  G      D ++           +     L A  +A  +     
Sbjct: 75  VTTPTGFKQAYAQYVEGGWAALSCDPAYGGQGLPLV-LNQCFYEMLNAANQAWTMYPGLS 133

Query: 157 TSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             A   +    TP   K + PK+ S  +  T             + LTE   GTD+  + 
Sbjct: 134 HGAYACLHAHGTPEQKKIYLPKLTSGAWTGT-------------MCLTEAHCGTDLGLLR 180

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++ +  +DG Y ++G K F+S+   D       ++LA++         +  F+ P+ +  
Sbjct: 181 TKAEPQADGSYKITGSKIFISAGEHDMAGNIVHLVLARLPDAPAGSKGISLFVCPKFIVH 240

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N +    L++K+G   NAT ++      G L+G  +     +  M     L 
Sbjct: 241 ADGSLGERNAIDCAGLEHKMGIHGNATAQIMLDGASGSLVGQPHKGLAAMFVMMNAARLG 300

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
               S+    V+   A+ YA+ R                  +I  P ++R +        
Sbjct: 301 VGNQSLGLTEVAYQNALAYAKERLQMRSLAGPRARDLPADPIIVHPDVRRMLLTAKAYAE 360

Query: 368 AATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              ALS   A   D+ +   +E      +    ++ PI K +             +  GG
Sbjct: 361 GGRALSSYCALLLDKEQQHPDEKVRQASSEMLALLTPIVKAFITDNGYEATTLCQQVFGG 420

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GYI+E  + +H R++  N I  G+     LD+L     G N             G++ K
Sbjct: 421 HGYIKESGMEQHVRDARINMIYEGTNTIQALDLLGRKVLGNN-------------GATLK 467

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASS 513
           K   +L         ++ +A F+T  + L   
Sbjct: 468 KFGQLLGQLAQEAGTNRSMAEFITPLVELGEQ 499


>gi|254476275|ref|ZP_05089661.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214030518|gb|EEB71353.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 381

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+     P   +L  +    G                +           MA    
Sbjct: 26  PFARQWEAEGTIP--KSLWPQVGELGFGGLYVSEETGGAGLSRLDATLVFEALSMACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +     P + S              +  +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMLDTFASDEMKARIMPDVLS-------------LNTVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++  K ++G Y L+G K F+S    SDA++ + +  G  G   +  +  +   
Sbjct: 131 SDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGISTVYVEDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L++K+G +S  T +++F +       L+G+                L+ A  S
Sbjct: 189 AGLSFGGLEDKMGWKSQPTAQVQFDDCKIPADNLVGEEGSGFKYAMMGLDGGRLNIASCS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D+  
Sbjct: 249 LGAAQQALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQAAWKLDQGT 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    ++ + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M +     L
Sbjct: 363 GTNEIMRVITARHL 376


>gi|215482249|ref|YP_002324431.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|301345865|ref|ZP_07226606.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301512721|ref|ZP_07237958.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596581|ref|ZP_07241589.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|213985921|gb|ACJ56220.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
          Length = 387

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 143/395 (36%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEMTPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  +    +  +     P I S E      
Sbjct: 69  DPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    LK K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++     V   EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E         + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQLKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|326575348|gb|EGE25276.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis CO72]
          Length = 608

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 85/485 (17%), Positives = 178/485 (36%), Gaps = 58/485 (11%)

Query: 70  AQELARMANYNTPQL-HAYGPGGERWDK-VEFHP-AWHALLRRSIHDGLHCSIWDRSFEP 126
            +  A  A      L       G ++D  V   P  +     +    G      +  F  
Sbjct: 42  LEAAADFAQSVIAPLNRTGDIEGCQFDHGVVTTPTGFKEAYAQYCELGFPAINAEPEFGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYD 184
           +    +  + +A   +M        M P ++  ++  +    T      +  K+ +  + 
Sbjct: 102 LGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGTEVQKATYLEKMNTGAWS 159

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--- 241
            T             + LTE   G+D+  I ++     DG Y ++G K F+S+   D   
Sbjct: 160 GT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTE 206

Query: 242 --AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               I+LA++         +  F+VP+ + +     G  N +    +++K+G +++AT  
Sbjct: 207 NIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCV 266

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---- 344
           + F +  G+L+G  N     +     +  L +AI  ++   ++   ++ YA+ R      
Sbjct: 267 MNFDHAKGYLIGPKNRGLNAMFTFVNVARLGTAIQGLAASELAFQGSLTYAKERTAMRAL 326

Query: 345 --------SGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRSE---EA 390
                   S   +I  P ++  +           AL + L   A++  + ++ SE     
Sbjct: 327 SGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGENPSEVKFAD 386

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K +  +         ++  GG GYI E  + ++ R++  + +  G+    
Sbjct: 387 EILSLLTPIAKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQ 446

Query: 451 VLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
            LD+L     G    +       + Q    +       +   +S   +     R LT +I
Sbjct: 447 ALDLLGRKVLGSQGRMLANFTKIIHQFCQENADN--DEVGQMVSTLAKLNQQWRDLTSRI 504

Query: 509 ALASS 513
           A+ S+
Sbjct: 505 AMQST 509


>gi|228955269|ref|ZP_04117277.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228961248|ref|ZP_04122868.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229049694|ref|ZP_04194251.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH676]
 gi|229072492|ref|ZP_04205694.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus F65185]
 gi|229082251|ref|ZP_04214714.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-2]
 gi|229112447|ref|ZP_04241985.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-15]
 gi|229147550|ref|ZP_04275897.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST24]
 gi|229181300|ref|ZP_04308630.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 172560W]
 gi|228602193|gb|EEK59684.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 172560W]
 gi|228635976|gb|EEK92459.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST24]
 gi|228671095|gb|EEL26401.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-15]
 gi|228700683|gb|EEL53206.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-2]
 gi|228710468|gb|EEL62441.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus F65185]
 gi|228722607|gb|EEL73995.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH676]
 gi|228798454|gb|EEM45447.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228804402|gb|EEM51013.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 600

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|126667851|ref|ZP_01738817.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein
           [Marinobacter sp. ELB17]
 gi|126627667|gb|EAZ98298.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein
           [Marinobacter sp. ELB17]
          Length = 383

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 130/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W+K    P    L       G+ C               + +            A
Sbjct: 27  PHYEQWEKDGIAP--RKLWNTLGDAGMLCVDVPEGCGGCGAPFQYSVVVGEELARLGFGA 84

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +M  S   A  ++ +      + W PK+ S E                 + +TE  
Sbjct: 85  LSTNVMVHSDIVAPYLSHLGNDEQKQQWLPKMVSGE-------------AVGAIAMTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+ A+ ++  K  D  Y L+G K F+++   +D  I+ A+ +   G   V   L D 
Sbjct: 132 AGSDLQAMRTRAVKEGDD-YILNGSKTFITNGQHADMVIVAAKTDPSAGAKGVSLFLVDT 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    R  +KIG  +  T EL F++       LLG+       +        L    
Sbjct: 191 TLEGYGVGRNLDKIGQHAGDTSELFFADMRVPASALLGEAGKGFAYLMQELPRERLVIGA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V+  R +L   + Y + R + G  L      +  +A +  +     A         D+
Sbjct: 251 LGVAAARGALDLTVAYCQERVLFGQKLAQLQNTRFEMARMETEYRINKAFV-------DQ 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +           A + KY   +M   V    ++  GG GY  E  I+R + ++    I
Sbjct: 304 CINEYVAGTLDAATASMAKYSATEMQCRVTDGCLQLFGGYGYTSEYPISRAFADARVQRI 363

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 364 YGGTSEIMKEIIARSI 379


>gi|323490502|ref|ZP_08095708.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323395768|gb|EGA88608.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 382

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 129/378 (34%), Gaps = 33/378 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y       D++     W  L       G  C   +  ++ +     + +           
Sbjct: 30  YDQW--EKDRIIPKSFWKKL----GDMGFLCPQVEEQYDGLGLDFRYAVVIGEEMERVGA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +  +   +         + W P   S ++                + +TE  
Sbjct: 84  SLTGVGLHNDITVPYIEAYGNEEQKQRWLPGCVSGDH-------------ITAIAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV--GCFLVPRLLE 263
            G+D+A I++   +  D  Y ++G K F+++ ++   + ++ + + +       +  L+ 
Sbjct: 131 TGSDLANISTTAVRDGDN-YIVNGQKTFITNGINSTLVLVVVKTDPKAEPKHRGISLLMV 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    R  +K+G  +  T EL F +       L+G+ N     + +      L  
Sbjct: 190 EEGTPGFEKGRKLDKVGLHAQDTSELYFEDCVVPAANLIGEENKGFTYLMEKLQQERLVV 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +       L   + Y + R   G  +      +  + ++A +I    +    L    
Sbjct: 250 ALAAQIASEDMLDMTLEYVKSRKAFGKPIGSFQNSQFKLVEMATEIELGHSFLESLIEDH 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K              + KYW    A  +  E M+  GG GY+EE  IAR YR+ P  
Sbjct: 310 MAGKD-------IVSKVSMAKYWLTDTAKKISGECMQLHGGYGYMEEYKIARRYRDIPVA 362

Query: 441 SILLGSGNAMVLDVLNLL 458
           +I  GS   M   +   +
Sbjct: 363 AIYAGSNEIMKTIIAKRM 380


>gi|300023493|ref|YP_003756104.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525314|gb|ADJ23783.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 589

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 93/528 (17%), Positives = 182/528 (34%), Gaps = 71/528 (13%)

Query: 52  SVVHKELELLGEYVL--SCTAQELARMA-NYNTPQLHAYGPGGERWDK------VEFHPA 102
           +    +L   G Y    + T + +   A  +    L      G++         V   P 
Sbjct: 17  AAGLDDLLRRGLYAGLDAETIRAVIEEAGKFGAEVLAPLNAPGDKTGSKFSAGSVTTPPG 76

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    R+    G         F      +        ++  + +  G     +  +   +
Sbjct: 77  FRDAYRQFAEGGWSSLPCAEEFGGQGLPEIVSAAVGEIWNASNVSFGLCPLLTQGAIHAI 136

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T  +   + P + + ++  T             + LTE   G+D+  +T++     
Sbjct: 137 EAGGTDAIKAKYLPNMVAGKWTGT-------------MNLTEPHAGSDLGPLTTRAVPQD 183

Query: 223 DGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y ++G K F++    D       ++LA+          +  FLVP+ L +     G 
Sbjct: 184 DGTYRITGTKIFITYGEHDMAENIIHLVLARRPDAPAGTRGISLFLVPKFLVNDDGSLGE 243

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            N +    +++K+G  ++ T  ++F       G+L+G+ N     +  M     L   + 
Sbjct: 244 RNDVVCAGVEHKLGIMASPTCVMKFGENGGATGYLIGEENRGLATMFVMMNAARLGVGLQ 303

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATAL 372
            V     +   AI YAR R   G             +I+   ++R +  +     AA  +
Sbjct: 304 GVGVAERATQHAIAYARERRQ-GKSLASNGSSGMSPIIEHADIRRMLLMMKALTQAARMI 362

Query: 373 SFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            F  A   D A+       R      A ++ P+ K +   +A  V +  ++  GG G++E
Sbjct: 363 CFATAREHDIARLSNDPSERKAALDKAALLTPLAKAFSTDIANEVASLGVQVHGGMGFVE 422

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           E   A++ R++    I  G+       L    L      +     + L          VI
Sbjct: 423 ETGAAQYLRDARILPIYEGTNGIQAIDLVTRKLPLANGGVVSAYLAELA--------DVI 474

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
             +R   S   E   +A+ LTE ++   +A       +    +  L +
Sbjct: 475 AKVRA--SNRPEFGRMAQRLTEALSGVQTATLWMGLMLKSEPEAALAS 520


>gi|73999767|ref|XP_857956.1| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial
           precursor (IVD) isoform 2 [Canis familiaris]
          Length = 429

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 136/385 (35%), Gaps = 32/385 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLM 143
               P  +  D            ++  + G+        +         ++     +  +
Sbjct: 59  EHLAPQAQEIDHFNEFKNLREFWKQLGNLGVLGITAPAQYGGSGLGYLEQVLVMEEISRV 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SAAVGLSYGAHSNLCLNQIVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISD-----GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV--GC 255
           E   G+D+ ++  + +K ++       Y L+G+K W  + P +D  I+ A+ +  V    
Sbjct: 166 EPNAGSDVVSMKLKAEKKANFLSLGDYYILNGNKFWITNGPDADILIIYAKTDLAVVPAS 225

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + + +  G    +  +K+G R + T EL F +        L   +  V  +   
Sbjct: 226 RGITAFIVEKNMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHLSKGVYVLMSG 285

Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           + L+  ++S   +  M+  L   I Y   R   G  +    +M+  +AD+   + A    
Sbjct: 286 LDLERLVLSGGPLGLMQAVLDHTIPYLHTREAFGQKIGHFQLMQGKMADMYTRLMACRQY 345

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            + +A + D+    +++             +  + A  V  + ++C G +GYI +  + R
Sbjct: 346 VYNVAKACDQGHCTAKD-------CAGVILYSAECATRVALDGIQCFGANGYINDFPMGR 398

Query: 433 HYRESPANSILLGSGNAMVLDVLNL 457
             R++    I  G+     L +   
Sbjct: 399 FLRDAKLYEIGAGTSEVRRLVIGRA 423


>gi|323488665|ref|ZP_08093907.1| butyryl-CoA dehydrogenase-like protein [Planococcus donghaensis
           MPA1U2]
 gi|323397683|gb|EGA90487.1| butyryl-CoA dehydrogenase-like protein [Planococcus donghaensis
           MPA1U2]
          Length = 593

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 154/419 (36%), Gaps = 50/419 (11%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
            +K+E H   H   LL+ +   GL  +     +  +   + A  + A ++         H
Sbjct: 52  VEKLENHEFEHSVRLLKTAGELGLLGADVPEQYGGLGLDKIASALIAEKMSKAGGFSITH 111

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                + S   + L       + + P++ S E                   LTE   G+D
Sbjct: 112 GAHVGIGS-LPIVLFGNEEQKQSYLPRLASGEM-------------IAAYALTEPSSGSD 157

Query: 211 IAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
                +  +    G  Y L+G K W  ++  +D F++ A+++G          + +    
Sbjct: 158 ALGAKTVAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGDK----FSAFIVEREFP 213

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+     + K+G +S++T  L   +    +   L     G +    IL        + ++
Sbjct: 214 GVSVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGEAGRGHIIAFNILNIGRYKLGVGTI 273

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--- 382
              + ++   I Y  +R      +    + +  +A +A  + A  +  +R    F++   
Sbjct: 274 GASKRAMELTIPYTNQRQQFKTPISSFNLTREKLATMASKLYAVESSVYRTVGLFEDRMS 333

Query: 383 ---------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                     K  ++  A   +   + K++  +    ++ E ++  GG G+++E  I R 
Sbjct: 334 GFTDEQHADGKLVADAIAEFAVECSLNKFFGTETLDYIVDEGVQLHGGYGFMQEYEIERI 393

Query: 434 YRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSG 480
           YR+S  N I  G+     L V            L LL+    L E+L   + +++G+  
Sbjct: 394 YRDSRINRIFEGTNEINRLLVPGTLLRKAMKGELPLLQHAQKLQEELLMMMPEEVGTDA 452


>gi|296137158|ref|YP_003644400.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295797280|gb|ADG32070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 375

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 142/395 (35%), Gaps = 35/395 (8%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            + R A  +  Q     P    W +    P     L+     G         ++      
Sbjct: 8   RMIRDAVRDFAQAE-IAPHAADWARESRFP--REALQGLAALGCLGIAVPAEWDGAGLDY 64

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
                A      A      ++S +      + +   +      W   +   E+       
Sbjct: 65  LSLALAVEEIAAADGATSTIVSVNNCPVCSILMAWGSDAQKDQWLRPVARGEW------- 117

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQV 249
                      LTE + G+D + + +  +   D  Y L G K F++S  +    I+LA  
Sbjct: 118 ------IGAFALTEPQAGSDASNLRATARLEGDH-YVLDGVKQFITSGKNGQVAIVLAAT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +   L      G   +RL++K G  ++ T ++ F          +N      
Sbjct: 171 DRAAGKKGISAFLVPTDTPGYIVERLEDKTGQSASDTAQIRFEGCRVSA---VNRLGAEG 227

Query: 310 EDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +       +  A  SV   R +   A+ YAR R   G  + +   ++  +A++A
Sbjct: 228 EGYKIALSGLEGGRIGIAAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQFRLAEMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  L +  A+  D      +EAA A++MA        +MA  V + A++  GG G
Sbjct: 288 MQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMA-------SEMAERVCSAALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R +R+     I  G+ +   + +   L
Sbjct: 341 YVADFPVERIWRDVRVCQIYEGTSDVQKMLIARAL 375


>gi|206970232|ref|ZP_03231185.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|296505439|ref|YP_003667139.1| acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
 gi|206734809|gb|EDZ51978.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|296326491|gb|ADH09419.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171]
          Length = 594

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|260554052|ref|ZP_05826315.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404791|gb|EEW98298.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 404

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 140/377 (37%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +      
Sbjct: 46  PFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGSG 103

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P+I S E                 L +TE  
Sbjct: 104 GVHTSLMVHTIGAPPIQHFGSEELKARVLPEIISGE-------------KISALAITEPS 150

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 151 GGSDVAALQTKAVREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLID 209

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 210 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFLG 268

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    
Sbjct: 269 VVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMT 328

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K +  E         + K    +        A++ +GG G++      R YRE   N 
Sbjct: 329 QPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 385

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 386 IGGGAEEIMKDLISKQL 402


>gi|165870944|ref|ZP_02215596.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|227817779|ref|YP_002817788.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|254753149|ref|ZP_05205185.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum]
 gi|164713453|gb|EDR18978.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488]
 gi|227005338|gb|ACP15081.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|146307714|ref|YP_001188179.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145575915|gb|ABP85447.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 386

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 145/397 (36%), Gaps = 28/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P  + W+K    P  H + +++   GL        F  
Sbjct: 4   TQEHEELRRTVRNF--VDKEINPHVDAWEKEGRFP-IHEIFKKAGELGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ I AA  +  +        +   +      +A   +  + +++     S E  
Sbjct: 61  MGLDYSYSIVAAEEFGTIHCGGIPMSIGVQTDMCTPALARFGSDELREEFLRPAISGEM- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          +G++E   G+D+A + +  +K  D         W  +SP +D   
Sbjct: 120 ------------VGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFIC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++      G+      +K+G RS+ T ++ F N        +  
Sbjct: 168 LLANTSDDKPHVNKSLIMVPMKTPGISVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIGA 227

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  M       L  A   + G+   +   I Y ++RH  G  LID  V+   +A+
Sbjct: 228 EGAGFMMQMLQFQEERLFGAANMIKGLEHCVDATIDYCKQRHTFGQPLIDNQVIHFRMAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I    AL ++    + + +  ++       +A + K    ++   V    ++  GG
Sbjct: 288 LQTEIECLRALVYQATEQYVKGRDVTK-------LASMAKLKAGRLGREVSDACLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G++ +  ++R YR+    SI  G+   M+  +  L+
Sbjct: 341 MGFMWDNPVSRAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|283993133|gb|ADB57042.1| acyl-CoA dehydrogenase [Heliothis virescens]
          Length = 421

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 131/407 (32%), Gaps = 46/407 (11%)

Query: 66  LSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LS   + L  +A   T     P    Y   G      E+      +++++   GL     
Sbjct: 39  LSEEQKALQDLARKFTRGEIVPVAAQYDKTG------EYP---WPIVKKAWEVGLMNGHI 89

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +          A             M  S      V +       K +  ++  
Sbjct: 90  PEHCGGMNMDVFDGCMVAEELAYGCTGIMTAMEASGLGQMPVIIAGNKEQQKKYLGRLV- 148

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                       +  +     +TE   G+D+A + ++ +K  D         W  +  ++
Sbjct: 149 ------------EEPIVAAYCVTEPGAGSDVAGVKTRAEKKGDEWIINGQKMWITNGGVA 196

Query: 241 DAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           + + +LA+      C         + +    G+   R +  +G R++ T  + F +    
Sbjct: 197 NWYFVLARTNPDPKCPASKAFTGFIVERDWPGVSPGRKEQNMGQRASDTRGITFEDVRVP 256

Query: 298 LLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                NV        KI +          A  +    + +L EA  YA  R   G  +  
Sbjct: 257 ---KENVLIEEGAGFKIAMGAFDKTRPPVAAGATGLAQRALTEATKYALERKTFGVPIAR 313

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +AD+A+ +  A     R A   D     +       ++A + K    ++A   
Sbjct: 314 HQAVAFMLADMAIGVETARLAWMRAAWMADHGIRNT-------VLASVAKCHASEIANKA 366

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A+A++  GG+G+  E  + +  R++    I  G+     L +   +
Sbjct: 367 AADAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREI 413


>gi|171057876|ref|YP_001790225.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775321|gb|ACB33460.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 67/352 (19%), Positives = 129/352 (36%), Gaps = 20/352 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +    + ++     L   A        +     +  + +  TP  
Sbjct: 46  EMGLFGLTVPEEYGGIGLSVSQEVLVNYELGRTAAAFRSVFGTNIGIGSQGILIDGTPEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             D+ P++ S E             + +   LTE   GTD A++ ++ +   D       
Sbjct: 106 KADYLPRVASGE-------------LIMSFALTEPDAGTDAASLKTRAELDGDHYILNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   V   +      GL   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMART-GGPGAGGVSSFIVPAGLPGLKLGKPDKKMGQRGTKTCDVI 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L+ + +S       + E+  YAR R   G
Sbjct: 212 LENVRVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVSCGLASRIIDESRRYARERKQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   ++ A  +L   +A  FD AK          +     K +  +
Sbjct: 272 KAIGEFQLIQAMLADSQAEMLAGWSLVKDVALRFD-AKPAHVSDPDVSMRVSCAKLFATE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           M   V    ++  GG+GYI E  + R YR++    +  G+     + +   L
Sbjct: 331 MVGRVADRGVQIHGGAGYINEYPVERFYRDARLLRLYEGTTQVQQIIIGREL 382


>gi|113866842|ref|YP_725331.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113525618|emb|CAJ91963.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 91/476 (19%), Positives = 184/476 (38%), Gaps = 59/476 (12%)

Query: 66  LSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                 E A+        L+      P   +   V   P +    R+    G    +  +
Sbjct: 37  AEAVLDEAAKFNEQVVAPLNRAGDLDPSSWKDGVVTTTPGFKEAFRQFGEGGWQGVLHPQ 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            F      +   +  A   ++        + P +T  ++ AL+T  T      + PK+ S
Sbjct: 97  EFGGQGLPK--LVATACNEMLNTANLSFALCPLLTDGAIEALLTAGTDEQKATFLPKLIS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+AA+ ++ +   DG Y + G K F++    
Sbjct: 155 GEWTGT-------------MNLTEPQAGSDLAAVRTRAEPQGDGTYKVFGTKIFITYGEH 201

Query: 241 D-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+          +  F+VP+ + +     G  N +    +++K+G +++
Sbjct: 202 DMAKNIVHLVLARTPTAPEGVKGISLFIVPKFMVNADGSTGERNDVHCVSIEHKLGIKAS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L+F +     G L+G+ N     +  M         +  ++    +  +A+ +AR 
Sbjct: 262 PTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAFARE 321

Query: 342 RHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
           R  S            +I  P +KR +  +      A A+++  A + D A    +EA  
Sbjct: 322 RVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVR 381

Query: 391 ----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A+   + P+ K W  +++  V +  ++  GG G+IEE   A+HYR++    I  G+
Sbjct: 382 QQNQAFYEFLVPVVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGT 441

Query: 447 GNAMVLDVLNL--LEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKED 497
                 D++    +  G  +   +    +  E  LG+      T ++  ++  +  
Sbjct: 442 TAIQANDLIGRKTVRDGGAVARAICAQIAETEAALGNHSCAGFTAVQAQLAKGRAA 497


>gi|30023042|ref|NP_834673.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|229130260|ref|ZP_04259219.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-Cer4]
 gi|229153195|ref|ZP_04281374.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1550]
 gi|29898602|gb|AAP11874.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579]
 gi|228630294|gb|EEK86944.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1550]
 gi|228653193|gb|EEL09072.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-Cer4]
          Length = 600

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|108757129|ref|YP_631256.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108461009|gb|ABF86194.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 383

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 134/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQL 146
           P  + W+  E  P    L  R    G     +   +      + ++           +  
Sbjct: 29  PFVKEWEAREAFP--RELFTRFGELGFLGLKYPVEYGGSAAGELYEAVLLEELGRCGSGG 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  L +    S   +    T      W              AP  +      LG+TE  
Sbjct: 87  VSAGLGAQFTISTGPIHQFGTDAQKLRWL-------------APAIRGEKIGALGITEPD 133

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+A + +  ++  D  Y L+G K ++++ +   F++LA + +   G   +  ++ + 
Sbjct: 134 AGSDVAGLRTTARREGD-SYVLNGSKTYITNGVRADFVVLAVKTDPSAGHKGLSMVVVEK 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G R++ T EL F +       LLG        +        L  A+
Sbjct: 193 GTPGFSVGRKLDKLGWRASDTAELFFEDCRVPAENLLGVEGQGFAQIMGNFQWERLSLAL 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V  M   L   +   + R   G  L    V++  +A++     +A  L++        
Sbjct: 253 GAVGAMEDMLETVLAQVKSRRAFGQSLHQFQVVRHKLAELFTARESARQLTYHALRLHVA 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +       +A     + K    +    V  E ++  GG+GY+ E  I RH+R++    I
Sbjct: 313 GE-------WAVAQTSMAKKVATETCCRVADECLQLHGGAGYMMEYDIQRHWRDARLGPI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 366 GGGTSEVMNEIIAKQL 381


>gi|258511817|ref|YP_003185251.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478543|gb|ACV58862.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 397

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 129/368 (35%), Gaps = 36/368 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             WD+ +       +LRR    GL        +        +   A     + + +    
Sbjct: 29  REWDEKQHFE--PGVLRRLAELGLMGVCIPEKYGGAGMD--YNTLAIVCEELERGDIAFR 84

Query: 152 MSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            + SV +      +    T    + +               P  +       GLTE   G
Sbjct: 85  TAVSVHTGLNSLTLLQWGTEEQKQKYL-------------VPQARGEKIGAFGLTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+AA+ +   +  D         W   + ++D F++ A  +       +   + +    
Sbjct: 132 SDVAAMRTTAVRDGDSYILNGSKIWISLADVADHFLVFAYTDRSKKHHGITAFIVERGWE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV-- 325
           G   + +K K+G R+  T EL F +    +    N      E  KI +  LD+   +V  
Sbjct: 192 GFSTRSIKGKLGIRAGNTGELFFDHVRVPI---ENRLGEEGEGFKIAMSALDNGRFTVAA 248

Query: 326 ---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                +   L  ++ Y   R   G  +    ++++ IA +A ++  +  L +R     ++
Sbjct: 249 GACGCIAACLEASVKYCHERETFGQPIGKHQLVQQMIAKMAANLDISRLLVYRAGWLKNQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + E + A+ +A       C  A    ++A++  G  GY  E  + R+ R + A  I
Sbjct: 309 GLPNTRETSLAKWVA-------CDAAWEAASDAVQIHGAYGYSNEYPVERYLRNAKAPVI 361

Query: 443 LLGSGNAM 450
             G+    
Sbjct: 362 YEGTREIH 369


>gi|149048723|gb|EDM01264.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_d
           [Rattus norvegicus]
          Length = 566

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/464 (18%), Positives = 166/464 (35%), Gaps = 52/464 (11%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
              +  FP V  +EL  + ++V       L +  N              + D+    PA 
Sbjct: 54  QKGVFPFPEVSQEELSEINQFVG-----PLEKFFNEEV--------DSRKIDQEGKIPA- 99

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L +    GL        +  +        R   +  M       L +        + 
Sbjct: 100 -DTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGII 158

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L+        + PK+ S E+                  LTE   G+D A+I ++     D
Sbjct: 159 LVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDAASIQTRATLSED 205

Query: 224 GIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             Y  L+G K W  +  +++ F + A+      +G +   +    + +    G+   + +
Sbjct: 206 KKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKM-TAFIVERDFGGITNGKPE 264

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS---- 331
           +K+G R + T E+ F NT   +   L  V  G    M I   L+S   S+          
Sbjct: 265 DKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRFSMGSAVAGMLKK 321

Query: 332 -LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + +   YA  R      L +  +++   A +A       ++++  +   D+        
Sbjct: 322 LIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPD--- 378

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               I A + K +  + A   ++EA++ +GGSGY+++    R  R++    I  G+   +
Sbjct: 379 --CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEIL 436

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            L +    L   G  L  ++      ++ +  + +   LRDS+ 
Sbjct: 437 RLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLG 480


>gi|115495621|ref|NP_001069019.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|116242943|sp|Q0NXR6|ACAD8_BOVIN RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName:
           Full=Acyl-CoA dehydrogenase family member 8;
           Short=ACAD-8; Flags: Precursor
 gi|90658380|gb|ABD97096.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus]
 gi|90658382|gb|ABD97097.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus]
 gi|119223979|gb|AAI26751.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Bos taurus]
          Length = 416

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 63  PHMAEWDQKELFPV--DTMRKAAQLGFGGVYVQTDVGGAGLSRLDTSIIFEALATGCTST 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS       ++    +        P + + E                   LTE   G
Sbjct: 121 TAYMSIHNMCVWIIDRFGSEEQRHRLCPPLCTME-------------KFASYCLTEPGSG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +   +  D  Y L+G K F+S    +D ++++ +  G  G   +  ++ +   
Sbjct: 168 SDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRT-GGPGPRGISCVVVEKGT 225

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 226 PGLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCS 285

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  Y + R   G  L +   ++  +AD+A  + A+  +    A +     
Sbjct: 286 LGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAARLVASRLMIRTAATAL---- 341

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A ++  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 342 --QEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 399

Query: 445 GSGNAMVLDVLNLLEK 460
           GS   M + +   L +
Sbjct: 400 GSNEVMRMLISRSLLQ 415


>gi|70731548|ref|YP_261289.1| hypothetical protein PFL_4197 [Pseudomonas fluorescens Pf-5]
 gi|68345847|gb|AAY93453.1| fadE13 [Pseudomonas fluorescens Pf-5]
          Length = 385

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 143/397 (36%), Gaps = 28/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R       +     P  E W+K    P  H + R++   GL        F  
Sbjct: 4   TQEHEELRRTVRQFVDR--EINPHVEEWEKAGRFP-IHEIFRKAGELGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ I AA  +  +        +   +      +A   +  +  ++     + E  
Sbjct: 61  MGLDYSYSIVAAEEFGTIHCGGIPMSIGVQTDMCTPALARFGSDELRDEFLRPAITGEQ- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          +G++E   G+D+A + +  +K  D         W  +SP +D   
Sbjct: 120 ------------VGCIGVSEVGAGSDVAGLKTHARKDGDDYVINGSKMWITNSPSADFIC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++   +  G+      +K+G RS+ T ++ F N        +  
Sbjct: 168 LLANTSDDKPHVNKSLIMVPMNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIGH 227

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A+
Sbjct: 228 EGAGFMMQMLQFQEERLFGAANMIKGLEYCVDSTIEYCKERKTFGSPLIDNQVIHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++ +I    AL ++    +   +  +        +A + K    ++   V    ++  GG
Sbjct: 288 LSTEIECLRALVYQATEQYVRGQDVTR-------LASMAKLKAGRLGREVSDSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G++ +  +AR YR+    SI  G+   M+  +  L+
Sbjct: 341 MGFMWDNPVARAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|42784188|ref|NP_981435.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|47567043|ref|ZP_00237760.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|42740119|gb|AAS44043.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987]
 gi|47556361|gb|EAL14695.1| acyl-CoA dehydrogenase [Bacillus cereus G9241]
 gi|324328938|gb|ADY24198.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|90077334|dbj|BAE88347.1| unnamed protein product [Macaca fascicularis]
          Length = 579

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 154/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 113 ILLFGTKAQKEKYLPKLASGE-------------TLAAFCLTEPSSGSDAASIRTSAVPS 159

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 160 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 219

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 220 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 276

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A+ YA  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 277 RGIITKAVDYATNRIQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 334

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 335 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 390

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 391 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIV 449

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 450 HPELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 503


>gi|313901888|ref|ZP_07835307.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
 gi|313467829|gb|EFR63324.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965]
          Length = 604

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 91/450 (20%), Positives = 173/450 (38%), Gaps = 42/450 (9%)

Query: 94  WDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E   H    ALLRR+   GL       ++E +   +A           A       
Sbjct: 62  IDELEHGHHEHSVALLRRAGELGLLAVEIPAAYEGLGLDKATATLVVEKLAPAGSFGVTF 121

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +     P   + + PK+ + E+                  LTE   G+D 
Sbjct: 122 GAHTGIGTLPIVYFGNPEQKRRYLPKLATGEW-------------IAAYALTEPDAGSDA 168

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               ++     DG  Y L+G K W  +S  +D F++ A+V+G      +   + + S  G
Sbjct: 169 LGGKTRAVLSPDGKHYILNGQKQWITNSGFADVFVVYAKVDGDK----MTAFIVERSFPG 224

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVS 326
           +       K+G + ++T  L  ++    +     ++        ++  +     A  ++ 
Sbjct: 225 VSVSEEVRKMGIKGSSTRTLYLNDVPVPVENVLHEVGKGHHIAFNILNIGRWKLAAGNLG 284

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +A A  YA+ R   G  +   P++++ +A +A    A  A+ +R A +FD + S 
Sbjct: 285 ACKELIALATQYAQGRKQFGQPIASFPLIQQKLAAMAARTYALEAMVYRTAGAFDASLSE 344

Query: 387 SEEAAYAR------------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            ++ A               + A I K +  +    V+ EA++  GG GY++E  + R Y
Sbjct: 345 IDQDAPDAGRQAITAISEYAVEASINKVFGSETLDFVVDEAVQIHGGYGYMQEYEVERAY 404

Query: 435 RESPANSILLGSGNAMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           R++  N I  G+     L +   L     KG     Q  S +++DL             S
Sbjct: 405 RDARINRIFEGTNEINRLLIPRELMRRTMKGQLPLMQALSRVQKDLAEMSPLGPAGEAAS 464

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRA 520
             L +E   +A   T ++ L  +  A+ + 
Sbjct: 465 GPLAEEQALVAN--TRRLGLMVAGLAVQKY 492


>gi|313225127|emb|CBY20920.1| unnamed protein product [Oikopleura dioica]
          Length = 571

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 27/376 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           GP    WD    +P    +++ S   G            +   +              + 
Sbjct: 215 GPFSAEWDAKCHYPI--DVIKSSAEQGFLGLYTSEDVGGMGLSRLETSIVVEALSEHCVP 272

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +M+     + M+ +  TP   +++ P++ S E             +     LTE   
Sbjct: 273 TTAMMTIHNMVSWMIDVNGTPEQREEYCPRLTSGE-------------IIGSYCLTEPGS 319

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D +A+ +   +  D  Y L+G K F+S   + D + ++ + +    G   +  +L   
Sbjct: 320 GSDASALATTCVRDGDD-YVLNGSKCFISGAGVHDLYAVMVRTDPATKGPKGISCVLIPK 378

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              GL +   + K+G +S+ T  L   N       LLG                 ++ A 
Sbjct: 379 DTPGLSFGADETKMGWKSHPTKVLIMENCRVPVSNLLGVEGKGFNIAMSGLNGGRVNIAS 438

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G + ++  A  +   R   G  L  Q  ++  +A++A  +  +  +    A + D+
Sbjct: 439 CSLGGAQKAMLAAKEHLGVRKAFGKTLDSQQYLQYKMAELATQLVTSRLMVRHAAAAIDQ 498

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                     A  +  + K         V    ++  GG GY+++    +  R+   +SI
Sbjct: 499 KDPA------AASLCAMAKLHATDNCSEVANGCLQMFGGYGYLKDYPCEQIVRDLRVHSI 552

Query: 443 LLGSGNAMVLDVLNLL 458
           L G+   M L +   L
Sbjct: 553 LEGANEVMRLIISRQL 568


>gi|78224497|ref|YP_386244.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78195752|gb|ABB33519.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 380

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 137/374 (36%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P +          GL   +   ++                        
Sbjct: 25  PRALELDEKSLFPEYAR--DLFAKLGLLNPLLPAAYGGTEMGVLTLALILEELGRVCAST 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+         +    +P + + +  +               ++++   L  TE   G
Sbjct: 83  ALLLIAQTDGMLPIIHGGSPELKERYLRRFAG------------ESTLLTALAATEPAAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ A+ ++  +  D  Y ++G K F+++  ++D  ++ A  +   G   +   + +   
Sbjct: 131 SDLLAMKTRAVRQGD-KYVINGQKCFITNGSVADVIVVYAYTDPEKGSKGISAFVVEKGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMS 324
            GL Y R ++K+G R +   EL F N        +    TG    M+ L    +  A  +
Sbjct: 190 PGLVYGRNESKMGMRGSINSELFFENMEVPAENIIGAEGTGFANLMQTLSTNRVFCAAQA 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +L  A+ + + R   G  +     ++  +AD+A  + A+  L+ + A   D+  
Sbjct: 250 VGIAQGALDIAVRHTQDRVQFGKPIAHLAPVQFMVADMATAVEASRLLTRKAAELLDDGD 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +      A +   + K      A  V  +A++ +GGSGY++E  + R  R++    I  
Sbjct: 310 KK------AVLYGSMAKTMASDTAMRVTTDAVQVLGGSGYMKENGVERMMRDAKLTQIYT 363

Query: 445 GSGNAMVLDVLNLL 458
           G+     +     L
Sbjct: 364 GTNQITRMVTGRAL 377


>gi|304313252|ref|YP_003812850.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798985|emb|CBL47223.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 383

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 128/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W+K E  P    +  +   +G  C      +             A     A L A
Sbjct: 28  PHYEAWEKAEIFP--REVWNKLGENGYLCVDVPEEYGGFGADFGLSAIIAEELGRANLGA 85

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S   A  +  + T    + W PK+ S E                 + +TE  
Sbjct: 86  LCTSVSVHSDIVAPYIFHLGTEAQKQAWLPKMVSGE-------------AVGAIAMTEPG 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+  + +      +  Y ++G K F+++      ++L A+ +   G   V     D 
Sbjct: 133 AGSDLQGMRTTALLDGN-QYVINGQKTFITNGQHCDLVVLAAKTDPSAGARGVTLFTVDC 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
           S  G    R   K+G  S  T E+   N       +LG +      + +      L   I
Sbjct: 192 SLPGFNRGRNLEKMGLHSGDTSEMFLDNLRVDEDQVLGGVGRGFANLMNELPRERLILGI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++      +    +Y + R      +      +  +A++   +    A        ++ 
Sbjct: 252 GAIGACDGMMEATANYVKERRAFSQPISAFQNTRFKMAELKTQLEVNRAFIQVCTEKYNR 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EA+ A++          ++   V  E ++  GG GY++E  +AR Y ++    I
Sbjct: 312 GQLSATEASMAKLST-------TELQGKVADECLQLFGGYGYMQEYPLARAYVDARIQRI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 365 YGGTSEIMKEIIAREL 380


>gi|100817933|ref|NP_766266.3| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Mus musculus]
 gi|26344894|dbj|BAC36096.1| unnamed protein product [Mus musculus]
 gi|74211342|dbj|BAE26429.1| unnamed protein product [Mus musculus]
          Length = 625

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/483 (17%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              I  G+   + L +    L   G  L  ++      ++ +  + +   LRDS+    +
Sbjct: 425 ILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVD 484

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +L  SA                 L R G N + +  +  R  +   + 
Sbjct: 485 LGLTGDLGVVHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANILINL 544

Query: 542 HCM 544
           + M
Sbjct: 545 YGM 547


>gi|54025795|ref|YP_120037.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017303|dbj|BAD58673.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 381

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 132/355 (37%), Gaps = 26/355 (7%)

Query: 110 SIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   G         F    V+   +        +  Q         +   A  +  ++  
Sbjct: 46  AGKQGFLGMAVPEEFGGGGVKDFRYNAVITEETVKGQYSGLGFSLHNDVIAPYLLELSND 105

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK  S E             +   + +TE   G+D+  I ++  +  D  + L
Sbjct: 106 EQKQRWLPKFCSGE-------------LITAIAMTEPGTGSDLQGIKTRAVRDGDD-WIL 151

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+++ + +D  I++AQ +   G      L+ +    G    R  +KIG ++  T 
Sbjct: 152 NGAKTFITNGINADLVIVVAQTDPEKGAMGFSLLVVERGMPGFERGRNLDKIGLKAQDTA 211

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F++        L     G +  M+ L    +  A+M+ + M   L     Y R R  
Sbjct: 212 ELSFTDVRVPGKNLLGTEGMGFIHLMQNLPQERMSIAVMAAAAMEACLDMTCQYVRDRKA 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++A    A   +  R     +  K  +E+AA A+        W 
Sbjct: 272 FGKPIGALQNTRFVLAELATKTTAVRIMVDRFIEDLNAGKLSAEDAAMAKW-------WS 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +    +I   ++  GG GY+ E  IA+ Y ++   +I  G+   M   +   L+
Sbjct: 325 TEEQLDLINRCLQLHGGYGYMREYPIAKAYTDARIQTIYGGTTEIMKEIIGRSLK 379


>gi|302381946|ref|YP_003817769.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192574|gb|ADL00146.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 593

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 89/486 (18%), Positives = 179/486 (36%), Gaps = 56/486 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWDK-VEFHP-AWHALLRRSI 111
               + +   ++    +E A+ A     P  H+    G  WD  V   P  W    +  +
Sbjct: 26  QPGFQDVSSDLVQQVLEEGAKFAEEVIAPINHSGDKEGCHWDNGVVTGPKGWKEAYQAMV 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D ++          +   +    A          +  + + +    +  + 
Sbjct: 86  EAGWPALSADPAYGGQGMPAVVGMAFGQFTAGASAAFSMYPGLTAGAYAGIHANASEELK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + PK+ + E+  T             + LTE + GTD+  + ++     DG Y ++G 
Sbjct: 146 TKYLPKMATGEWGGT-------------MNLTEPQCGTDLGMVRTKAVPQGDGTYKITGQ 192

Query: 232 KWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K ++S+   D        +LA+VEG       +  FLVP+++ +     G  N L    L
Sbjct: 193 KIWISAGEHDFTDNIIHTVLARVEGAPAGIKGLSLFLVPKVMVNDDGSLGERNSLQCAGL 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   NAT  +++ +  G+L+G+       +  +     L + +  ++    +   A
Sbjct: 253 EHKMGIHGNATCVMQYDDATGWLIGEEGRGMNNMFVVMNEARLGTGLQGLAIGAAAYQAA 312

Query: 336 IHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  ++  P ++R + +    +    A     A   D  
Sbjct: 313 LEFAKDRIQGRSLTGPKNPDAQADSIMVHPDVRRMLLEAKAFVEGGQAFVLWTALQADLE 372

Query: 384 KSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           KS  E  A     Y  ++ P+ K +       V +  M+  GGSGY E    +++ R++ 
Sbjct: 373 KSADEATATKAKDYMGLLTPVLKAYLTDKGFHVASLGMQVHGGSGYTEHFQASQYLRDAR 432

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSI 491
              I  G+     LD++   L   G       F+ ++  +  +G     K  +  L D+ 
Sbjct: 433 ITMIYEGTNGIQALDLVGRKLPSNGGRAIMSWFADIDAFVAENGADTPIKPFVDGLTDAK 492

Query: 492 SLCKED 497
              +E 
Sbjct: 493 KKLQEA 498


>gi|23099848|ref|NP_693314.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778079|dbj|BAC14349.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/449 (18%), Positives = 165/449 (36%), Gaps = 40/449 (8%)

Query: 93  RWDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           + D +E H   H   LL+++   GL  +     +  +   + +  +   +          
Sbjct: 52  KIDNLENHEFEHSVDLLKKAGDLGLLGADVPEQYGGLALDKISSSLITEKFSRAGGFSVT 111

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           H     + S   +         +++ PK+ + E             +     LTE   G+
Sbjct: 112 HGAHVGIGS-LPIVFFGNDEQKENYLPKLATGE-------------LLAAYALTEPSSGS 157

Query: 210 DIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           D     +  +    G  Y L+G K W  +S  +D FI+ A+++G          + +   
Sbjct: 158 DALGAKTTAKLNDAGTHYILNGEKQWITNSAFADVFIVYAKIDGEH----FTAFIVEREF 213

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+     + K+G +S++T  L   +    +   L     G V    IL       A+  
Sbjct: 214 PGVSTGPEEKKMGIKSSSTRTLVLEDAEVPIENLLGEKGRGHVIAFNILNVGRYKLAVGG 273

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--- 381
           V G + ++  A  Y   R      +    + K  +A +A  I A  +  +R    F+   
Sbjct: 274 VGGSKRAIELAAKYTNERKQFNTPISSFNLTKEKLATMAAGIYANESSVYRTVGLFEQRM 333

Query: 382 ---------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                    + +  +   A  +I   +TKY   ++   V+ EA++  GG G+++E  + R
Sbjct: 334 GALTDEQLKDGREVARSIAEYQIECSMTKYMATELLDYVVDEAVQMHGGYGFMQEYEVER 393

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
            YR+S  N I  G+     L V   L K     +     L++  G   + ++ +  +  +
Sbjct: 394 AYRDSRINRIFEGTNEINRLLVPGTLIK--KAIKGELPLLQKAQGLQEELMMMMPEEVGT 451

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAG 521
              E +       +K+ L  +  A  + G
Sbjct: 452 EALEQEKYLLKNAKKMVLLGAGLAAQKYG 480


>gi|307198078|gb|EFN79131.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Harpegnathos saltator]
          Length = 637

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/416 (20%), Positives = 164/416 (39%), Gaps = 60/416 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ + EY                  LTE   G+D ++I  +  K 
Sbjct: 173 ILLFGTPEQKAKYLPRVCNGEY--------------AAFCLTEPSSGSDASSIRCRAVKA 218

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQV   +   G     +   + +    G+    
Sbjct: 219 ADGSHYILNGSKIWISNGGIANIMTVFAQVPTKDPNTGEMKNKMTAFIVERGFGGVTSGP 278

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G R + T E+ F +         NV     +  K+ +  L++    ++      M
Sbjct: 279 PEKKMGIRCSNTAEIFFEDVKIPA---ENVLGKEGQGFKVAMNILNNGRFGMAAALSGNM 335

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R  ++ A+ +A +R   G  L +   ++  IA +A+      +L++ ++ + D   +   
Sbjct: 336 RYCISRAVSHATQRVQFGRTLDNYGTIQEKIARMAMLHYITESLAYMISGNMDRGSQDYH 395

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 396 LEAA-------ISKCFSSESAWWVCDEAIQTLGGMGYMRDAGLERVLRDLRIFRIFEGAN 448

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR----- 502
           + + L +      G          L++   + G  V  +  ++        GL+      
Sbjct: 449 DILRLFIA---LTGIQYAGSHLKELQKAFKNPGANVGLLFGEATKRATRAIGLSSPPTFT 505

Query: 503 -----FLTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                 L E  AL S +         A+L + G   + + F+ NR       T+ M
Sbjct: 506 HLVHPKLAESAALCSKSVESFGNTIEASLIKYGRGIVEEQFILNRLTQAAFDTYTM 561


>gi|218235541|ref|YP_002369806.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
 gi|218163498|gb|ACK63490.1| acyl-CoA dehydrogenase [Bacillus cereus B4264]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|52140527|ref|YP_086303.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
 gi|51973996|gb|AAU15546.1| acyl-CoA dehydrogenase [Bacillus cereus E33L]
          Length = 594

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 82/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          +K EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EKHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|330826395|ref|YP_004389698.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311767|gb|AEB86182.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 599

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 93/516 (18%), Positives = 185/516 (35%), Gaps = 65/516 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            +     +E AR        L+      G + +   V     W    +     G +    
Sbjct: 36  DMADAILEEAARFTGEVLAPLNRLGDTEGCKLEANGVVTPAGWKEAYKAFCDGGWNGLGS 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +F      +   I    +   A L        +  + + +    +  +   +  K+ +
Sbjct: 96  PAAFGGQGLPETFGIAVKEMAASANLSFSLCSMLTGGAVAALLTCASDELKAVYLEKMIT 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE   G+D+A I S+ +  +DG Y + G K F++    
Sbjct: 156 GAWTGT-------------MNLTEPNAGSDLALIRSRAEPQADGSYRVFGQKIFITYGDH 202

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ L +     G+ N      +++K+G  ++
Sbjct: 203 DMTDNIVHLVLARLPDAPAGVRGISLFLVPKFLVNADGSLGARNDAHCVSIEHKLGIHAS 262

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L F +     G+LLG+ N     +  M     L   +  ++    +  +A+ YAR 
Sbjct: 263 PTCVLAFGDNGGAVGYLLGEANRGLEYMFIMMNEARLGVGLQGIALAERAYQQALAYARE 322

Query: 342 RHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-- 391
           R              +   P ++R +  +   + A  A+++  A   D A + ++     
Sbjct: 323 RKQGRDAVTGEALVTIDRHPDVRRMLMLMKSRVEACRAVAYYTAGLLDRAHAGADAGQKQ 382

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A  M PI K    +M   V +  ++  GG G+IEE   A+H+R++   +I  G+ 
Sbjct: 383 RDLFLAEFMIPIVKGGSTEMGIDVTSLGIQVHGGMGFIEETGAAQHWRDARITTIYEGTT 442

Query: 448 NAMV--LDVLNLLEKGTNLFEQLFSTLEQ-----------DLGSSGKKVITILRDSISLC 494
                 L +  L        + +F  +             +L + G+++ T L   I   
Sbjct: 443 CIQANDLILRKLARDQGATAQVVFGEVAATVRALSESERPELQAMGQRLGTALPAWIEST 502

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           +     A+     I+   +AA  Y      +   ++
Sbjct: 503 EWLLANAKS---GISGVLTAAVPYLHMATSVCGAWM 535


>gi|319950137|ref|ZP_08024073.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319436178|gb|EFV91362.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 385

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 136/396 (34%), Gaps = 37/396 (9%)

Query: 70  AQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            +E AR   A   TP    +       D+            R+   GL C      +   
Sbjct: 20  LREHARAFFAKEMTPNQEKWAAQKH-VDR--------ETWLRTGEAGLICLDVPEEYGGQ 70

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 +       + +   A  +   S  +   VA   T    K W PK+ S E+    
Sbjct: 71  GGDPGMEYLVTEELVYSGDTAFGMGVGSTITPHYVANYATEEQKKAWLPKMCSGEW---- 126

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                       + +TE   G+D+  + +  ++  D  Y ++G K F+S+  S  F+++A
Sbjct: 127 ---------ISAIAMTEPGAGSDLKGVRTTAKRDGD-SYVINGSKTFISNGGSADFVVVA 176

Query: 248 -QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDL 302
            + +   G   +     + S  G    R+  K+G     T EL F++        L G+ 
Sbjct: 177 AKTDPDAGHKGMALFAVEASTPGFERGRVLEKMGRHGADTAELFFNDMRVPAANLLGGEE 236

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + +      L  A+ +++    ++ E I Y + R   G  ++D    +  +A  
Sbjct: 237 GQGFYQLMNQLPRERLAIAVDALAMAEAAVVETIAYTKERQAFGQPVLDFQNTRFELAHC 296

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A               +  +  A+ A++ A         M   V+   ++  GG 
Sbjct: 297 KTQVMATRTFVDYCIQREIAGELDAVTASMAKMQA-------TDMLDDVVDRCLQLFGGY 349

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY+ E  I + +  +    I  G+   M   +   L
Sbjct: 350 GYMMEYPITQKFAAARVMRIYGGTNEIMKEVIGRAL 385


>gi|284031611|ref|YP_003381542.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810904|gb|ADB32743.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 380

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 134/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P  +RW++    P    L   +   GL   +    +    VR              A+  
Sbjct: 27  PHHDRWEEAGIVP--RELWTAAGAAGLLGFMMPPEYGGGGVRDFRFNAVLIEELTRARAS 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  +  +++ +    +      W P   S E                 + +TE   
Sbjct: 85  GVGFTIHTDINSAYLLDYASDEQKARWLPSFCSGE-------------TVTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  I +   +  D  Y L+G K F+S+ + +D  I++A+ +   G   +  L+ +  
Sbjct: 132 GSDLQGIRTTAVRDGD-QYVLNGQKTFISNGILADLVIVVAKTDPEAGYQGISLLVVERG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +KIG ++  T EL F +       LLG+       + +      L  A++
Sbjct: 191 MAGFERGRNLDKIGLKAQDTAELFFDDVRVPAANLLGEQGQGFVYLMEKLPQERLTIAVV 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +     L   + Y + R   G  +      +  +A++A +   A     R        
Sbjct: 251 AAAACENVLESTLQYVKDRKAFGRPIGSFQNSRFVLAELATETQIARVFVDRCIEELTAG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAA A+        W  ++   V+   ++  GG G++ E  IA+ Y ++   +I 
Sbjct: 311 TLTVSEAAMAKW-------WTTELQKKVVDRCLQLYGGYGFMTEYPIAKAYLDTRVQTID 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 364 GGTTEIMKEIIGRTL 378


>gi|254481275|ref|ZP_05094520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038438|gb|EEB79100.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 378

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/392 (21%), Positives = 148/392 (37%), Gaps = 35/392 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            MA     QL    P  E W++    P    L  +    GL C     +F       + +
Sbjct: 11  DMARRAFEQL--ISPHYEAWEEKHLVP--RDLWNQLGEAGLLCPDMPEAFGGAG--TSSQ 64

Query: 135 IRAARLYLMAQLEAGHLMSP----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +  A +  ++ +  G L S     S   A  +    T    + W PK+ + E        
Sbjct: 65  VCFAMIEELSHMGFGGLASGYGIHSNIVAPYIEHFGTEEQKQQWLPKMVTGE-------- 116

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-V 249
                    L +TE   G+D+  I +   +  D  + L+G K F+++ +    +++A   
Sbjct: 117 -----AVGALAMTEPGAGSDVQGIRTSAVQDGDE-WVLNGSKIFITNGIHADLVIVAAIT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           +   G       L D S  G    +   KIG  ++ T EL F +       LLGDLN   
Sbjct: 171 DPGKGAKGTSLFLVDASLPGFDKGKKIEKIGQHASDTAELFFQDVRLPANALLGDLNKGF 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +        L  A  +V+    +L   + Y + R   G  +      +  +AD+  +I
Sbjct: 231 VIMMKELPRERLGIAAQAVAAAEGALQITVDYVQERKAFGQTVGSFQNTRFTLADVKTEI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           A   A   + AN +  ++  +++AA  +  A        +M    + + ++  GG GY  
Sbjct: 291 ALNRAFYDQCANQYASSELSADDAAMLKYAA-------TEMQCKTVDQCLQLFGGYGYTA 343

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I+R+Y ++    I  G+   M   V   +
Sbjct: 344 EYPISRYYTDARIQRIYGGTSEIMRELVARSI 375


>gi|217962475|ref|YP_002341047.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
 gi|217063480|gb|ACJ77730.1| acyl-CoA dehydrogenase [Bacillus cereus AH187]
          Length = 594

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|24646207|ref|NP_650163.2| CG4860 [Drosophila melanogaster]
 gi|7299576|gb|AAF54761.1| CG4860 [Drosophila melanogaster]
 gi|21064323|gb|AAM29391.1| RE05302p [Drosophila melanogaster]
 gi|220958136|gb|ACL91611.1| CG4860-PA [synthetic construct]
          Length = 415

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 134/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +PA    +RR    GL        +                        
Sbjct: 58  PKARHHDREELYPA--EQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAV 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T +  +D+       E+                  L+E   G
Sbjct: 116 SIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEH-------------IAFYALSEPGNG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++  +   D         W  +S  +   I+ A V+  +    +   L      
Sbjct: 163 SDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMKHKGITAFLTPKDVP 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           GL   + ++K+G R+ +T +L   +          V     +  KI +  LD   + ++ 
Sbjct: 223 GLSIAKKESKMGMRATSTCQLVLEDVHVPRS---RVLGAAGDGFKIAMQSLDCGRIGIAA 279

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D 
Sbjct: 280 QATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDN 339

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++EAA A++ A  +  +C         + ++ +GG GY  +     +YR +    I
Sbjct: 340 GLPITKEAAMAKLHASESATFC-------AHQCIQILGGMGYTTDLPAELYYRNARVTEI 392

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + + N + +
Sbjct: 393 YEGTSEIQRIVIANAVLR 410


>gi|308050792|ref|YP_003914358.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307632982|gb|ADN77284.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 596

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 96/491 (19%), Positives = 175/491 (35%), Gaps = 57/491 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E  +        L+      G R+D  +V     + A  ++ I  G      
Sbjct: 36  DLVDAVLEEAGKFTESVIAPLNRVGDEQGCRFDNGEVTTPEGFKAAYQQYIDAGWPTLAQ 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              F       +  +  A +   A          S  + + +       +   + PK+ S
Sbjct: 96  PTQFGGQGLPYSLNLVCAEMQSAANHAFAMYPGLSHGAQATLMAHGDEALQARFMPKLVS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   G+D+  + ++     DG Y L G K F+SS   
Sbjct: 156 GEWTGT-------------MCLTEAHCGSDLGLLRTKATPQEDGSYRLDGSKIFISSGDH 202

Query: 241 D-----AFIMLAQVEGR-VGCFLVPRLLEDGS----------PNGLCYQRLKNKIGNRSN 284
           D       I++A++EG   G   +   L               NG+    +++K+G   N
Sbjct: 203 DLAENIVHIVIARIEGAPAGTKGISLFLVPKMAVADDGSITGRNGVSCGSIEHKMGIHGN 262

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+LLG+ N     +        +  A   V+    S   A+ YAR R  
Sbjct: 263 ATCVINFDGATGYLLGEPNRGLNAMFTFMNAARVGVAAEGVAAAEASFQGALAYARERLQ 322

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-------S 385
                           +I  P ++R +           AL + +A+  D +K       +
Sbjct: 323 MRSLSGIKAPDKPADPIIVHPDVRRMLLTQKAIAEGGRALVYEMASWVDISKSSTVSSEA 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R    A   ++ PI K +  +M     +  ++ +GG GY+ E  + +  R++  + +  G
Sbjct: 383 RQRAEARLSLLTPIAKAFLTEMGFEATSLGVQVLGGHGYVAEWGMEQLMRDTKISCLYEG 442

Query: 446 SGNAMVLDVLNLLEKG--TNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDKGLAR 502
           +     LD+L     G    L E   + L Q     +  + +  LR  +    +  G   
Sbjct: 443 TTGIQALDLLARKVLGSRGALLEGYCTELAQWWQAQTLPESLQPLRQQLLAHLQQWGE-- 500

Query: 503 FLTEKIALASS 513
            LT+ IA+ + 
Sbjct: 501 -LTQGIAVRAQ 510


>gi|288957345|ref|YP_003447686.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288909653|dbj|BAI71142.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 598

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 107/567 (18%), Positives = 203/567 (35%), Gaps = 73/567 (12%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M       D  F LN+      +      + L       P +V   LE  G++  S    
Sbjct: 1   MTYTAPVDDLRFVLNEVVGLDAI------AALPHCDGAAPDLVDAILEEAGKFA-SGVLA 53

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            L R+ +     L      G     V     W     +    G +   ++          
Sbjct: 54  PLNRIGDKEGATLE----NGV----VRTATGWKDAYAQFTEAGWNSLPFEPEHGGQGLPW 105

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                   ++  + L  G     +  +  ++    +      +  K+ S E+  T     
Sbjct: 106 TVAFAVNEMWQSSNLSFGLCPLLTQGAVDLLTEHASAEQKAVYLAKMISGEWTGT----- 160

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIML 246
                   + LTE + G+D+AA+ ++  +  DG Y ++G K F++    D       ++L
Sbjct: 161 --------MNLTEPQAGSDLAAVRTRAARAGDGSYRITGQKIFITYGEHDLTENIIHLVL 212

Query: 247 AQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           A++         +  F+VP+ L +     G  N L    L++K+G  ++ T  + + +  
Sbjct: 213 ARLPDAPAGIKGISLFIVPKFLPEADGTPGRRNDLRCASLEHKLGIMASPTAVMAYGDDE 272

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------- 345
              G+L+G+ N     +  M     L   I  V+    +  +A  YA+ R  S       
Sbjct: 273 GAIGYLVGEENRGIEYMFTMMNNARLGVGIQGVAIAERAYQQARDYAKSRVQSKDLADPK 332

Query: 346 --GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMA 397
             G  +I  P ++R + D+     AA AL+       D      +A  R+   A   ++ 
Sbjct: 333 GSGVAIIKHPDVRRMLLDMRAKTEAARALALYAGTQLDISRHHADATVRAAALARVDVLT 392

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVL 455
           PI K W   +   V +  ++  GG G+IEE   A+HYR++    I  G+       L   
Sbjct: 393 PIVKAWSTDIGCEVASTGVQIHGGMGFIEETGAAQHYRDARITPIYEGTNGIHGNDLTFR 452

Query: 456 NLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISLCKE------DKGLARFLTE 506
                         + +     +LG++    + ++R  +S   +      D  +A     
Sbjct: 453 KTGRDKGAAARAFVADMRATVAELGTAPGDDLAVIRSELSAGLDALDKAIDWMVATQAEG 512

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
            +  A++ A  Y     ++A  ++  R
Sbjct: 513 DLQGAAAGAVAYLKLWGNVAGGWMLAR 539


>gi|30265048|ref|NP_847425.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47530551|ref|YP_021900.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187864|ref|YP_031117.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|49481065|ref|YP_039027.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|167634900|ref|ZP_02393218.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|167639944|ref|ZP_02398212.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|170685801|ref|ZP_02877024.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|170707013|ref|ZP_02897470.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|177652271|ref|ZP_02934774.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190567109|ref|ZP_03020024.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|196032772|ref|ZP_03100185.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|206976381|ref|ZP_03237288.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|222098455|ref|YP_002532513.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|229601520|ref|YP_002869246.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
 gi|254687340|ref|ZP_05151197.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066]
 gi|254725353|ref|ZP_05187136.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055]
 gi|254735323|ref|ZP_05193031.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740589|ref|ZP_05198280.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
 gi|254761492|ref|ZP_05213513.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94]
 gi|30259725|gb|AAP28911.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames]
 gi|47505699|gb|AAT34375.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181791|gb|AAT57167.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]
 gi|49332621|gb|AAT63267.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|167512025|gb|EDR87403.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193]
 gi|167529650|gb|EDR92399.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442]
 gi|170128116|gb|EDS96986.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389]
 gi|170670265|gb|EDT21005.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465]
 gi|172082277|gb|EDT67343.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174]
 gi|190561613|gb|EDV15583.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I]
 gi|195994201|gb|EDX58156.1| acyl-CoA dehydrogenase [Bacillus cereus W]
 gi|206745305|gb|EDZ56705.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97]
 gi|221242514|gb|ACM15224.1| acyl-CoA dehydrogenase [Bacillus cereus Q1]
 gi|229265928|gb|ACQ47565.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248]
          Length = 594

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|309783450|ref|ZP_07678155.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|308917781|gb|EFP63473.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 386

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 69/356 (19%), Positives = 132/356 (37%), Gaps = 20/356 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             GL        F  +    A +   A       L     + +     +  + +  T   
Sbjct: 46  ELGLFGLSIPEEFGGIGLTMAQECEVAYELGHTALAFRSVVGTNIGIGSQGILIDGTAEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++ P+I S               + +   LTE   G+D A+I ++G K          
Sbjct: 106 KAEYLPRIASG-------------DLVVSFALTEPDAGSDAASIKTKGVKDGSDYLLSGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+ EG  G   +   +   +  GL   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMARTEG-AGAGGITAFIVPAALPGLSLGKPDRKMGQRGTKTCDVN 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L  + ++       L E++ YA++R   G
Sbjct: 212 LDNVRVPAANIIGGEPGKGFKTAMKVLDRGRLHISALACGMASRILQESVAYAQQRKQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D  +++  +AD   ++ A  +L   +A  +D AK          + A   K +  +
Sbjct: 272 QRIGDFQLVQAMLADSQAELLAGWSLVQSVAQRYD-AKPFGVSDPDVSMQASCAKMFTTE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           M   V    ++  GG+GYI E  + R YR+     +  G+     + +   L +G 
Sbjct: 331 MVGRVADRGVQIHGGAGYINEYKVERFYRDVRLLRLYEGTTQIQQIVIGKNLMRGA 386


>gi|289608274|emb|CBI60621.1| unnamed protein product [Sordaria macrospora]
          Length = 365

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 143/402 (35%), Gaps = 52/402 (12%)

Query: 60  LLGE--YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            LGE    +  T Q  A  A+   P            D  +  P    L       GLH 
Sbjct: 5   ALGEMADAIRETTQRFA--ADRIAPI-------AAAVDAEDRFP--QELWPEMGALGLHG 53

Query: 118 SIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                    +      H +    +   +        + S    + +A   +P     + P
Sbjct: 54  ITVREEDGGLGLGYLEHVVACEEVARASASVGLSYGAHSNLCVNQIARWGSPEQKAKYLP 113

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+                L ++E   G+D+ ++  +  K+  G        W  +
Sbjct: 114 KLISGEH-------------VGSLAMSEAGAGSDVVSMKLRADKVDGGYRLNGTKFWITN 160

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +P +   ++ A+     G   +   L +    G    +  +K+G R + T EL F++ F 
Sbjct: 161 APYAATLVVYAKSAPDAGSKGITAFLIEKDFAGFSIGQKIDKMGMRGSPTAELVFNDCFV 220

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
                                      ++  M+  L   + Y   R   G  +    +M+
Sbjct: 221 PDDNV------------------MGRSTLGLMQACLDTVLPYVAERKQFGKPIGAFQLMQ 262

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD+++ + +A A  + +A + D  ++   +AA A ++A        + A  V  +A+
Sbjct: 263 GKIADMSVALNSARAYVYAVAKACDAGRTTRHDAAGAILLA-------SENAVKVANDAI 315

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+GY ++  + R+YR++    I  G+     + +   L
Sbjct: 316 QALGGAGYTKDWPVERYYRDAKLLDIGAGTNEVRRMLIGREL 357


>gi|291455403|ref|ZP_06594793.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358352|gb|EFE85254.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 134/386 (34%), Gaps = 34/386 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N   P +  +    ER D          +++R    G+   +    +  V         
Sbjct: 23  DNEIVPHVRDWDR-AERVDP--------GIVKRLGELGILGLMLPEEYGGVEADMLSYTL 73

Query: 137 AARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                         ++S S+   +  +A   T     +W P++ + E             
Sbjct: 74  VTEELGRGDSSVRGIVSVSLGLVSKTIATHGTDEQKAEWLPRLAAGE------------- 120

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                 LTE   G+D  +++++ ++            +  +  ++D  ++ A+     G 
Sbjct: 121 ALGCFALTEPGTGSDAGSVSTRARRDGGDWVIDGAKIFITNGTVADVALVFART----GE 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             +   L      G     +  K+G R  AT EL            LG+     G     
Sbjct: 177 KGLTAFLVPTDSPGFTATEIHGKLGLRGQATAELTLEGVRVPDTARLGEEGRGLGIALGT 236

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +  A  +V   + ++  A+ YA+ R   G  +    +++  +AD  +D+  A  L
Sbjct: 237 LSRGRISVAAGAVGLAQGAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLL 296

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + ++A   D   S  E A      A + KY   + A  V    ++  GG GYI+E  + +
Sbjct: 297 THQVARMADAGASPKEYA----TDASVAKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGK 352

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           + R++   ++  G+     L +   L
Sbjct: 353 YLRDARVLTLYEGTSQVQKLIIGRAL 378


>gi|152987091|ref|YP_001347637.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150962249|gb|ABR84274.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 149/396 (37%), Gaps = 26/396 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R       +     P  ++W+K    P  H + R++   GL        F  
Sbjct: 4   TQEHEELRRTVRSFVER--EINPHVDQWEKDGRFP-IHDIFRKAGELGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDP 185
           +    ++ I AA        E G +    +  A  V   M TP + +       S E   
Sbjct: 61  MGLDYSYSIVAAE-------EFGGITCGGIPMAIGVQTDMCTPALARFG-----SDELRE 108

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P     +   +G++E   G+D+A + +  +K  D         W  +SP +D   +
Sbjct: 109 EFLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFMCL 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
           LA             ++   +  G+      +K+G RS+ T ++ F N        +   
Sbjct: 169 LANTSDDKPHVNKSLIIVPMNTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIGAE 228

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A++
Sbjct: 229 GAGFMMQMLQFQEERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             ++ A  AL ++    + + +  +        +A + K    ++   V    ++  GG 
Sbjct: 289 MTEVEALRALVYQATELYVKGRDVTR-------LASMAKLKAGRLGREVSDACLQYWGGM 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ +  ++R YR++   SI  G+   M+  +  L+
Sbjct: 342 GFMWDNPVSRAYRDTRLVSIGGGADEIMLGIICKLM 377


>gi|127513092|ref|YP_001094289.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126638387|gb|ABO24030.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 596

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 90/535 (16%), Positives = 185/535 (34%), Gaps = 71/535 (13%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  L+  +     +  + +   +     Q +A         L++   
Sbjct: 7   PLRDYQF-----ILSELLNIYGRDDLQGFDEIDAELTDAILQGVADFTTEIMLPLNSQGD 61

Query: 89  PGG-ERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D +V     +    ++ + +G      D  +      +   + A  +     +
Sbjct: 62  TQGCQLVDGQVRTPEGFKDAYQQYVDNGWATLTSDPEYGGQGLPECIGVFATEMKTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  +   +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKAKYLEKLVSGEWTGT-------------MNLTEAH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++ + + +  Y +SG K F+SS   D       ++LA++         +  
Sbjct: 169 AGTDLALLRTKAKPVGEDTYAISGEKIFISSGDHDLADNIVHLVLARLPDAPDGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP+ L +     G  NG+    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKYLVNDDGTLGCRNGVEASALEHKMGIHGNSTCVMVFDGAIGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YAR R                  ++    ++R 
Sbjct: 289 TMMNEARLGVGVQGLGVSEIAYQNALSYARERLQGRALSGVKESESPADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DE+    +       A  A +  P+ K +         
Sbjct: 349 LMAQKAFNQGARALMGQQALWLDESHRHQDKAKATIAAKLAALFTPVVKGFVTDQGFKAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            +A +  GG GYI E  + +  R+S    I  G+     LD++                L
Sbjct: 409 VDAQQVYGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVG-------------RKL 455

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
             D G +      +++  ++   ED+ L  +L   + L  +   L +A    +A+
Sbjct: 456 LADKGEALGLWSEMVKPFVAKYLEDEALKPYL---MPLMEATTDLEKATQYIVAN 507


>gi|157107361|ref|XP_001649745.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108879622|gb|EAT43847.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 621

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 86/463 (18%), Positives = 173/463 (37%), Gaps = 53/463 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G +  +    +  +      +      +  +    A  L +        + L  T   
Sbjct: 106 EMGYYGLMAPEEYGGLNLSNTGYATMGDAVGAVDLGLAVVLGAHQSIGWKGILLYGTEEQ 165

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P + S                     LTE   G+D  +I S+  K   G  Y L+
Sbjct: 166 KRKYLPMVVSG-------------KTTAAFALTEPSSGSDAGSIRSKAVKSPCGKFYTLN 212

Query: 230 GHK-WFLSSPMSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K W     +++ F + AQ    + R G     V   + +    GL     ++K+G R 
Sbjct: 213 GSKLWITGGGIANVFTVFAQTEVTDPRTGQKRDKVTGFIVERDFGGLTSGPAEDKMGIRC 272

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337
           + T E+ F +    +    NV  G     K+ +  L++    ++      MR  +A+A  
Sbjct: 273 SNTTEVFFDDVKVPV---ENVLGGEGNGFKVAMNILNNGRFGMAATLAGTMRACIAKATD 329

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +   ++  +A +A+       +++ +A + D   K    EAA     
Sbjct: 330 HANSRVQFGKKIKEFGNVQEKLARMAMLQYVTQTMAYMVAGNMDTGSKDYHLEAA----- 384

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +  + A  V  EA++ +GG+G+++   + +  R+     I  G+ + + L V  
Sbjct: 385 --ISKVFSSEAAWHVCDEAIQILGGNGFMKSAGLEKILRDIRIYKIFEGANDVLRLFVAL 442

Query: 456 -NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSIS---------LCKEDKGLARF 503
             +   G++L   ++ F     +LG   K+       S+          + +  K  A+ 
Sbjct: 443 TGIQYAGSHLKEIQRAFKNPTANLGLIFKEGSRRAARSMGVGGSDLSQFVAEPLKDSAKQ 502

Query: 504 LTE--KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +E   +   +  + L + G   + + FL  R  D+    + M
Sbjct: 503 CSESIDMFSLAVESLLIKYGKRIVDEQFLLTRLADSAIDIYAM 545


>gi|229014193|ref|ZP_04171314.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides DSM 2048]
 gi|228747147|gb|EEL97029.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides DSM 2048]
          Length = 608

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|254510438|ref|ZP_05122505.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221534149|gb|EEE37137.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 385

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 132/357 (36%), Gaps = 28/357 (7%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++   GL        +  V                A+ +AG            +    + 
Sbjct: 50  QAGQAGLMAGSIAEEYGGVGGGMGFD-SVTLYEQAARGDAGWGYGIQSIVTHYITTYGSE 108

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK+ S E                 L +TE   G+D+ A+ +  +K  +  Y L
Sbjct: 109 DQKQKWLPKLASGEM-------------IGALAMTEPGTGSDVQAVKTTAEKDGN-SYRL 154

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++   +D  I+ A+ +  +G   V  + +E     G    R   K+G + N T
Sbjct: 155 NGSKIFITNGQSADLVIVAAKTDKSLGAKGVSLIAVETDGAEGFRRGRNLKKLGMKGNDT 214

Query: 287 VELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F +    +   L      G  + M+ L    L   IM++  +  ++AE + Y + R
Sbjct: 215 AELFFEDVKVPMTNLLGSEEGQGFYQLMRQLPWERLTIGIMALGAIDFAIAETVKYVQER 274

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  ++D    +  +A+         +         +  +  +         A + KY
Sbjct: 275 KAFGQRVMDFQNTRFKLAECKTKAEVLRSFVNDCIGKLEAGELDAA-------TASMVKY 327

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           W  ++   ++ E ++  GG G++ E  IAR Y ++    I  G+   M   +   L+
Sbjct: 328 WGSEVQNEIMHECLQLFGGYGFMMEYPIARLYADARVQMIYGGTNEVMKELIARSLD 384


>gi|167565311|ref|ZP_02358227.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 377

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 134/378 (35%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EVVAQMGELGFLGMIVPPDWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   TP   + W   + +                     LTE + 
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTPAQKERWLRDLATG-------------KTIGAFSLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   L    
Sbjct: 131 GSEAHNLRTRAE-LRDGRWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFLVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIPQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +       A  YAR R   G  + +   +   +AD+A  I AA  L+   A   
Sbjct: 247 AAQAIGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLADMATQINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|152975507|ref|YP_001375024.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152024259|gb|ABS22029.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 569

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 146/383 (38%), Gaps = 32/383 (8%)

Query: 94  WDKVEFH--PAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGH 150
            + +E H      +L +++   GL        +    + K    + A ++          
Sbjct: 51  IENIEQHNYEISRSLFKKAGELGLLSIEVPEEYGGFELGKVVSGLVAEKMGYAGAFSVSF 110

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   V +   +    T    + +  KI S E+                  LTE   G+D
Sbjct: 111 NIHAGVGTLPYI-YYGTVEQKEKYLSKIASGEW-------------IGAYALTEPNAGSD 156

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             +  +      DG         +W  ++ M+D +++ A+    +  F+V R  E     
Sbjct: 157 ALSAKTSAVLNEDGTEWTLNGEKQWITNAHMADVYVVFAKTNEGMTAFIVERTCE----- 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     + K+G + ++T  L   +       +LG++        ++     L  A  ++
Sbjct: 212 GVSLGVEEKKMGIKGSSTATLILEDVVIPAKNVLGEVGKGHHVALNILNFARLKLAFGNI 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  ++ Y + R      L+D  +++  IA++ +    A + ++R A   D+A  
Sbjct: 272 GTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMTIATYGAESAAYRTAGIIDKAVD 331

Query: 386 RSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +++    ++        + K    +    ++ EA++  GG GY++E  + R YR++  +
Sbjct: 332 ENDDNIMRKMSQFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARIS 391

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     L V  +L K  N
Sbjct: 392 RIFEGTNEINRLTVAKMLMKQLN 414


>gi|196044031|ref|ZP_03111268.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|218906203|ref|YP_002454037.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|225866989|ref|YP_002752367.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|301056495|ref|YP_003794706.1| acyl-CoA dehydrogenase [Bacillus anthracis CI]
 gi|196025367|gb|EDX64037.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108]
 gi|218536613|gb|ACK89011.1| acyl-CoA dehydrogenase [Bacillus cereus AH820]
 gi|225790985|gb|ACO31202.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102]
 gi|300378664|gb|ADK07568.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI]
          Length = 594

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|332521255|ref|ZP_08397711.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332042983|gb|EGI79181.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 390

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 144/361 (39%), Gaps = 28/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASM 161
           H +  +    G     +  ++  +     + +        + +   A  + + +  + + 
Sbjct: 40  HFIWEKFGEMGFFGIAYPEAYGGMDLDLFYTVIFLEELQKVNSGGFAAAMWAHAYLAMTH 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V    +  + + +  K  + EY                + +TE  GG+D+A + +   K 
Sbjct: 100 VNAEGSEEIKQKYLTKSITGEY-------------IGAMAVTEPFGGSDVAGMRTTAVKK 146

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  Y L+G K F+++ + SD  ++ A+    +G   +   + D    G+   +L +K+G
Sbjct: 147 GD-TYVLNGSKTFITNGVYSDYIVVAAKTSPELGNKGISMFIVDRDAKGVSATKL-DKLG 204

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++ T E+ F N       L+G+       +        L   I + +    +L  A+ 
Sbjct: 205 WRASDTGEIAFDNVTIPASHLMGEEGKGFPYIMQHFAFERLIMGINAHARAEFALEYAVK 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +     ++  +AD   D+      ++ +A   D+ +   +E       A
Sbjct: 265 YMGERQAFGKSIDKFQALRHTMADCFADMEVCKEFNYTVAARLDKNEYVVKE-------A 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I+K    KMA  VI + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  +
Sbjct: 318 TISKLRSTKMADEVIYQCLQMLGGYGYMEEYPMARLLRDSRLGPIGGGTSEILREIIAKM 377

Query: 458 L 458
           +
Sbjct: 378 V 378


>gi|152981179|ref|YP_001352277.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
 gi|151281256|gb|ABR89666.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 596

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 98/515 (19%), Positives = 189/515 (36%), Gaps = 67/515 (13%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D LF +N+      +N       L       P  V   LE    +        L +  + 
Sbjct: 9   DMLFVMNELADLAAIN------ALPGCEDATPETVEAVLEENARFCG-EVIAPLNQAGDR 61

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           +  +            KV   P +    +     G         F      +   +    
Sbjct: 62  HPSEWKD--------GKVTTTPGFKEAFKAYAAAGWQGVQHPVDFGGQGLPK--LVATPC 111

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           + ++        + P +T  ++ ALMT  + +  + + P   + ++  T           
Sbjct: 112 MEMLNSASLSFALCPLLTDGAIEALMTAGSDQQKEKFLPNFIAGKWTGT----------- 160

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG- 251
             + LTE + G+D+A + S+     DG Y +SG K F++    D       ++LA+    
Sbjct: 161 --MNLTEPQAGSDLALVRSRAVPQGDGTYKISGTKIFITYGEHDMAENIIHLVLARTPDA 218

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298
                 +  FLVP+ L +     G  N      +++K+G +++ T  L+F +     G L
Sbjct: 219 PEGVKGISLFLVPKFLVNEDGSLGERNDAFCVSIEHKLGIKASPTAVLQFGDHGGAIGTL 278

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LI 350
           +G  N     +  M         I  +S    +  +A+ YA+ R  S  +        +I
Sbjct: 279 IGQENRGLETMFIMMNAARFAVGIQGISVAERAYQKAVAYAKDRVQSKDLEGSATAVSII 338

Query: 351 DQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            QP ++R +  +   I AA AL++       +A+   + K R  + A+   + PI K W 
Sbjct: 339 HQPDVRRMLMSMRAQIEAARALAYVGASAFDIAHHHGDEKVRDAQQAFYEFLVPIIKGWS 398

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGT 462
            +M+  V +  ++  GG G+IEE   A++YR++   +I  G+       L     +  G 
Sbjct: 399 TEMSIDVASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVGRKTVRDGG 458

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            +   + + +        +     L+   +     
Sbjct: 459 AVARGIIAAVRATESELARAATPDLKAIGAHLAAA 493


>gi|325289277|ref|YP_004265458.1| Butyryl-CoA dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964678|gb|ADY55457.1| Butyryl-CoA dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
          Length = 384

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 12/286 (4%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+   EY     A +          LTE   G+D  A  +   +  D  Y L+G K F +
Sbjct: 102 KLAGGEYHWKKVADVLTGGGLTAFALTEPSAGSDAGACRTTAVRSGDD-YILNGRKCFCT 160

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +D F ++A  +   G   +   L D    GL   + +NK+G RS+ T ++ F +  
Sbjct: 161 NAAYADIFTVIASTDRSQGAKGLTAFLVDAGTPGLTIGKEENKMGARSSNTCDVVFEDVK 220

Query: 296 GFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 +     G +  MK L      +   ++   R +L  A+ YA +R   G  + +Q
Sbjct: 221 VPAKNRIGEEGKGFIIAMKALGIGRASAGATAIGNARFALEYALDYATKRVTFGKPIAEQ 280

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+ + + AA +L+       D     +        +    K +      +V 
Sbjct: 281 QGIQHLLADMYMRLEAARSLTAYACQLVDNGIVDAA-------VNSSAKAFGSDTGMSVT 333

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A++ +GG GY +E  + +  R++    I  G+       +   L
Sbjct: 334 TDAVQILGGYGYSKEYPLEKRMRDAKIMQIWEGTNQIQRNLIAGNL 379


>gi|78060297|ref|YP_366872.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964847|gb|ABB06228.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 384

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 146/400 (36%), Gaps = 31/400 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            ++   Q L   AN    +   + P  E W +             +  +G  C+     +
Sbjct: 10  WMTHEHQMLFDTANRFFKE--QWVPRDEAWRQAGMMD--RHAWEEAGANGFLCASMPEEY 65

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                   H+         A +        S   A  +    T    + W P++ + E  
Sbjct: 66  GGAGGDFGHEAALILAQGAAGIGGFGGSLHSGIVAPYILRHGTEAQKQRWLPRLATGE-- 123

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAF 243
                      +   + +TE   G+D+ A+ +   +  D +Y ++G K F+++   ++  
Sbjct: 124 -----------LIGAIAMTEPGTGSDLQAVRTTAAREGD-LYRINGSKTFITNGQLANLV 171

Query: 244 IMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           I++ +     G   +  L+ +    +G    R  +K+G  +  T EL F +    +   L
Sbjct: 172 IVVCKTSKDEGAQGMSLLVIETDQASGFRRGRNLDKLGMDAQDTSELFFDDVQVPVDNLL 231

Query: 303 --NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             N   G ++ M+ L    L  A+  ++ M +++ E + Y + R   G  +      +  
Sbjct: 232 GGNEGMGFIQLMQELPQERLIVAVAGIAAMELAMQETLAYTKERQAFGKPIFSFQNTRFK 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+    + A+ AL      +    +   + AA         KYW       +I E ++ 
Sbjct: 292 LAECQALLMASRALVDAAIVAHLNGELGVDRAAL-------IKYWVTDNQCKLIDECLQF 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY++E  IAR Y ++    I  G+   M       L
Sbjct: 345 FGGYGYMKEYPIARLYADARVQRIYGGTNEIMKELASRYL 384


>gi|229105620|ref|ZP_04236254.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-28]
 gi|228677890|gb|EEL32133.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-28]
          Length = 605

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 84/466 (18%), Positives = 167/466 (35%), Gaps = 50/466 (10%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 58  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 109

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 110 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 156

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 157 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 214

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 215 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 272

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 273 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 332

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 333 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 392

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G++ E  I R YR+S  N I  G+     L V      GT L + +   L     +  
Sbjct: 393 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVP-----GTFLRKAMKGELPLLQKAQK 447

Query: 481 KKVITILRDSISLCKEDKGLARFL---TEKIALASSAAALYRAGMN 523
            +   ++     +  E   L R+L    +KI L  +  A  + G  
Sbjct: 448 LQEELMMMMPEEVGDEPLALQRYLVTNAKKIGLMVAGLAAQKYGKA 493


>gi|88802456|ref|ZP_01117983.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781314|gb|EAR12492.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 388

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 17/353 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           I   +     D  +  +   + +  +     Y +  LE    ++    +A   A+     
Sbjct: 38  IERFIWKKFGDMGYFGLSTPEEYGGLGLDLFYTIIFLEELQKINSGGFAA---AIWAHEY 94

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +      K            P     +   L +TE  GG+D+A + S   K  D  Y L+
Sbjct: 95  LAMTHLNKEGDDFIKNKYLLPSVAGEMVGCLCITEPFGGSDVAGMRSTAAKQGD-KYILN 153

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++ + SD  I+ A+ +       +   + D S  GL   +L +K+G R++ T E
Sbjct: 154 GSKTFITNGVYSDYLIVAAKTDPSDKYKGISLFVVDRSSKGLSATKL-DKLGWRASDTAE 212

Query: 289 LEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N    L   LG+       +     L  L   + + +    +L  A+ Y + R   
Sbjct: 213 LAFDNVEIPLENRLGEEGKGFPYIMQHFALERLIMGVNAHARAEFALDYAVDYIQERVAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L     ++  IA++A  +      ++ +    D         AY    A I+K    
Sbjct: 273 GKSLDQFQALRHKIAEMASKVDMCREYNYSITKRLDAG-------AYVVKEASISKLLST 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           KMA  VI +A++ +GG GYIE+  +AR  R+S    I  G+   +   +  ++
Sbjct: 326 KMADEVIYDALQMLGGYGYIEDYPMARLLRDSRLGPIGGGTSEILKEIIAKIV 378


>gi|294341456|emb|CAZ89873.1| Short-chain specific acyl-CoA dehydrogenase (SCAD) (Butyryl-CoA
           dehydrogenase) [Thiomonas sp. 3As]
          Length = 375

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 140/395 (35%), Gaps = 35/395 (8%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            + R A  +  Q     P    W +    P     L+     G         ++      
Sbjct: 8   RMIRDAVRDFAQAE-IAPHAADWARESRFP--REALQGLAALGCLGIAVPAEWDGAGLDY 64

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAP 190
                A      A      ++S +      + +   +      W   +   E+       
Sbjct: 65  LSLALAIEEIAAADGATSTIVSVNNCPVCSILMAWGSDAQKDQWLRPVARGEW------- 117

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQV 249
                      LTE + G+D + + +  +   D  Y L G K F++S  +    I++A  
Sbjct: 118 ------IGAFALTEPQAGSDASNLRTTARLEGDH-YVLDGVKQFITSGKNGQVAIVMAAT 170

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
               G   +   L      G   +RL++K G  ++ T ++ F           N      
Sbjct: 171 NRAAGKKGISAFLVPTGTPGYIVERLEDKAGQSASDTAQIRFEGCRVPA---ANRLGAEG 227

Query: 310 EDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
           E  KI +       +  A  SV   R +   A+ YAR R   G  + +   ++  +A++A
Sbjct: 228 EGYKIALSGLEGGRIGIAAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQFRLAEMA 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           + I AA  L +  A+  D      +EAA A++MA        +MA  V + A++  GG G
Sbjct: 288 MQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMA-------SEMAERVCSAALQIHGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ +  + R +R+     I  G+ +   + +   L
Sbjct: 341 YVADFPVERIWRDVRVCQIYEGTSDVQKMLIARAL 375


>gi|259419424|ref|ZP_05743340.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
 gi|259344665|gb|EEW56552.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
          Length = 391

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 138/360 (38%), Gaps = 26/360 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL+       +  +    A +                L   +V   S  + +  T   
Sbjct: 46  EMGLYGLSIPEEYGGIGLSMAQEAELIYDISHTSFAFRSLFGTNVGIGSQGILMDGTTEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P   S E             + +   LTE   G+D A++ ++  K  D  Y L+G
Sbjct: 106 KETWLPLFASGE-------------ITVSFALTEPEVGSDAASLKTRAVKDGD-FYVLNG 151

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++   + AF ++A+  G  G   +   +     +GL   +   K+G R   T ++
Sbjct: 152 TKRFITNANRAGAFTLMART-GEAGARGISAFVVPAGLDGLTIGKHDKKMGQRGTRTADV 210

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
              +        +      G    MK+L    L  A  +       + +A+ YA  R   
Sbjct: 211 ILEDVRVPAENIIGGIPGKGFYTAMKVLDRGRLHIATQACGMADRLIRDAMAYALDRKQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYW 403
           G  +    +++   AD   ++ AA ++  + A  +D   A SR++E + A   A  TK +
Sbjct: 271 GQPIASFQLIQGMFADSQAELYAAKSMLQKAATLYDTVPAGSRNDELSMA---AACTKMF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           C +M   V   A++  GG+GYI E  + R YR+     +  G+     + +   L +  N
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYISEYKVERFYRDVRLLRLYEGTTQIQQIIIAKHLMQRDN 387


>gi|224005380|ref|XP_002296341.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335]
 gi|209586373|gb|ACI65058.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335]
          Length = 378

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 132/379 (34%), Gaps = 25/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WDK    P     + +    GL     D               A           
Sbjct: 12  PHAGEWDKKHEFPT--EAVDKLAELGLMGINVDTDHNGSELDALSYAIAMEEISRGCASV 69

Query: 149 GHLMSPSVTSASMVA-LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +          +  + + +       E     +            GL+E   
Sbjct: 70  GVIMSAHNSLYLYPVDTFGSDELRERFVTPYTGHERSDDGRL------NIGCFGLSEPGN 123

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++      +         W  ++  S+A ++ A  +  +    +   +   + 
Sbjct: 124 GSDAGAASTTATLDGEEWVINGTKAWITNAYESEAAVVFATTDKSLKHKGISAFVVPTNL 183

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G      ++K+G R+++T  L   N         N+     +  KI +  LD   + V+
Sbjct: 184 PGFSLGAKEDKLGIRASSTANLIMENVRIPKS---NLIGELGQGFKIAMQTLDGGRIGVA 240

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A      A+ YA  R+  G  + +   ++  I+ + +   +A  L++R A   D
Sbjct: 241 GQALGIASASIDCAVKYALERNAFGKPIAELQSIQNKISAMVVARDSARLLTWRAAQLKD 300

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  + EAA A++ A      C         +A++ +GG GY+ E    RHYR++    
Sbjct: 301 NKERYTREAAMAKLAASEAATMCS-------HQAIQILGGMGYVTEMPAERHYRDARITE 353

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 354 IYEGTSEIQHLVIAGDVLK 372


>gi|296808389|ref|XP_002844533.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238844016|gb|EEQ33678.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 435

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 130/364 (35%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           A++ +    GL        +          I               ++    T  +   L
Sbjct: 92  AVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIIGIEELARIDPSVSVMVDVHNTLVNTAVL 151

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  V K W P++               T       L+E   G+D  A+ ++ +K S 
Sbjct: 152 KYGSAAVKKKWLPRL--------------ATDTVGSFCLSEPISGSDAFALQTKAEKTSS 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +S  +  FI+ A ++   G   +   + +    G    + + K+G R+
Sbjct: 198 GYKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIVEKDMPGFNIAKKEKKLGIRA 257

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYAR-- 340
           ++T  L F +         N+     +  K  I  L+   + ++     LA         
Sbjct: 258 SSTCVLNFDDVEVP---KENILGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAG 314

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R   G ++     M+  +A    +IAAA AL F  A   +  +   ++AA A   
Sbjct: 315 YIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNAARKKEAGQDFVQDAAMA--- 371

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  
Sbjct: 372 ----KLYASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAK 427

Query: 457 LLEK 460
            L+K
Sbjct: 428 TLQK 431


>gi|126651027|ref|ZP_01723238.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592228|gb|EAZ86277.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 382

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 129/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K    P      RR    G  C   +  +  +    +  +             
Sbjct: 28  PHYAQWEKDHLIPL--TFWRRLGDMGYLCPQVEEQYGGLGLDFSFGVIIQEELERIGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +    T      W PK  S +Y                + +TE   G
Sbjct: 86  IGIGLHNDIVVPYIESFGTHEQKSRWLPKCISGDY-------------ITAIAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I +   +  D  Y ++G K F+++ +     ++A +           +  L+ + 
Sbjct: 133 SDLANIQTTAIRDGDH-YIVNGQKTFITNGIHTNLAVVAVKTNPSAEKKHQGISLLVIEE 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 192 GTPGFTKGRKLEKVGMHAQDTAELFFEDCRVPVQNLLGEEGKGFVYMMEKLQQERLAVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +       LA  ++Y + R   G  + D    +  IA++A  +    +    L      
Sbjct: 252 AAQIATEDMLALTLNYVKSRQAFGKSIGDFQNTQFKIAEMATKMEIGKSFLESLIEEHLA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K              + KYW  + A  +  + M+  GG GY+EE  IAR YR+ P  SI
Sbjct: 312 GKD-------VVTKVSMAKYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + +   L
Sbjct: 365 YAGTNEVMKVIIAKNL 380


>gi|116195064|ref|XP_001223344.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88180043|gb|EAQ87511.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 435

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 129/361 (35%), Gaps = 32/361 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
            +    GL        +          I               ++    T  +   +   
Sbjct: 95  EQLFEQGLMGIEIPEDYGGAGMNFTAAIVGIEELARVDPSVSVMVDVHNTLVNTAVIKWG 154

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + K + P++               T+      L+E   G+D  A+ ++  +   G  
Sbjct: 155 SESLKKKYLPRL--------------ATNTVGSFCLSEPVSGSDAFALATKATETESGFK 200

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +S  ++ FI+ A ++   G   +   + D    G    + + K+G ++++T
Sbjct: 201 ISGSKMWITNSMEAEFFIVFANLDPSKGYRGITAFIVDKDTKGFSIAKKEKKLGIKASST 260

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYA- 339
             L F +         N+     +  K  I  L+   + +      LA      A+ Y  
Sbjct: 261 CVLNFDDVEVP---KENLLGERGQGYKYAISLLNEGRIGIGAQMTGLALGAWENAVKYVW 317

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G ++ +   M+  IA    +I AA AL +  A   +  ++   +AA A      
Sbjct: 318 NDRKQFGQLVGEFQGMQHQIAQSYTEITAARALVYNAARKKEAGENFVMDAAMA------ 371

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +   L+
Sbjct: 372 -KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIGAIYEGTSNIQLNTIAKTLQ 430

Query: 460 K 460
           K
Sbjct: 431 K 431


>gi|332306391|ref|YP_004434242.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173720|gb|AEE22974.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 600

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 84/466 (18%), Positives = 163/466 (34%), Gaps = 61/466 (13%)

Query: 55  HKELELLGEYVLSCTAQELA--RMANYNTPQLHAYGPGGER----WDK-VEFHP-AWHAL 106
            K    LG    S    E      A ++   L      G+     W+  V   P  +   
Sbjct: 22  EKHYADLGFEDASPDMVEAIFSEAAKFSENVLAPLNAVGDEEGCTWENSVVTTPTGFKDA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-- 164
            ++ +  G         F        + + +A    ++       M P ++   M  L  
Sbjct: 82  YQQYVEGGWPSMTHPAEFGGQELP--YSLSSALGEWLSGANHSWAMYPGLSQGCMATLEA 139

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K +  K+ +  +  T             + LTE   G+D+  + ++  K  DG
Sbjct: 140 HGTDEQKKMFLHKLVAGTWTGT-------------MCLTESHCGSDLGMLKTKAVKNDDG 186

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-----EDGSPN 268
            Y L+G K F+S+   D       I++A++         +  F+VP+       E+   N
Sbjct: 187 SYSLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGTKGISLFVVPKFNVSADGENEDRN 246

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +    +++K+G + +AT  + F    G+L+G  N     +        + + +  ++  
Sbjct: 247 AVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTENRGLNCMFTFMNSARIGTGLEGLASS 306

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
             +   A+ YA+ R                  +I  P ++R +           AL+   
Sbjct: 307 ETAFQGALAYAKDRVQFRSMKGVQNPDGPADPIIVHPDVRRMLLTQKAFAEGNRALAIYA 366

Query: 377 ANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               D      +EA      A    + PI K +  + A    +  M+  GG G+I+E  +
Sbjct: 367 MKLVDITLYSKDEAAKQISEAKLAFLTPIVKAFLTETAQESTSYGMQVYGGHGFIKEWGM 426

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--LFEQLFSTLEQ 474
            +  R++   ++  G+     +D+L     G+N  L E     +  
Sbjct: 427 EQLARDTRICTMYEGTTGIQAIDLLARKIVGSNGKLLEVFTQEIRD 472


>gi|319652848|ref|ZP_08006954.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317395425|gb|EFV76157.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 591

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 95/495 (19%), Positives = 180/495 (36%), Gaps = 62/495 (12%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +     + R A     ++    P  +R +  +F      LLR++   GL        +  
Sbjct: 30  TDEHILIGRTAKQFAEKMVQ--PEKDRIENQDF-ELVTDLLRKAGGLGLLAHSIPEKYGG 86

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +   +  K                  + +  +   +    TP   + + PK+ S EY   
Sbjct: 87  LGLDKISKGIVGESIASTGGYGVAHSNHTCIATLPITYFGTPEQKEKYLPKLASGEY--- 143

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFI 244
                          LTE   G+D  +  +      +G  Y L+G K ++++ + SD FI
Sbjct: 144 ----------IGAYCLTEPNAGSDALSSQTTAVLNQEGTHYILNGTKIYITNAVFSDTFI 193

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           + A+V+G+         + +    GL     +NK+G + ++T  + F +       LLG+
Sbjct: 194 VYAKVDGQ----YFTAFIVERDTPGLSLGPEENKMGIKGSSTRSVIFEDCPVPANQLLGE 249

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +        ++  L   +     +   +  L +AI +   R   G  + D P  K  IA 
Sbjct: 250 VGKGHIIALNVLNLGRFNLGSACMGASKTGLKKAIQFTGERKQFGKSIADFPATKEKIAK 309

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR----------IMAPITKYWCCKMAPAV 411
           +A  I AA +L +R AN  +E+ +   +++  +              I K +  +     
Sbjct: 310 MAGRIYAAESLQYRTANLLEESLADLYDSSDLKLIGKRMSEYATECAICKVFGSETLDYA 369

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL----DVLNLLEKGTNLFEQ 467
             E ++  GG+G+I+E  + + YR+S  N I  G+     L     +     KG      
Sbjct: 370 ADEVLQLHGGAGFIKEYGVEQMYRDSRINRIFEGTNEINRLLIPTHLFRKALKGDIDLAA 429

Query: 468 LFST----------LEQDLGSSGKKVITILRDSI-------------SLCKEDKGLARFL 504
                         + Q +    +  +  +R+               SL  E + L +  
Sbjct: 430 RVEEAVVQLSKPEPIGQGIFEKERAAVNTMRNLFLLNAGLAYEAFGSSLAHEQEALMKLA 489

Query: 505 TEKIALASSAAALYR 519
              IAL +S +A+YR
Sbjct: 490 DLAIALYASESAVYR 504


>gi|149377621|ref|ZP_01895359.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149358094|gb|EDM46578.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 381

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 137/409 (33%), Gaps = 44/409 (10%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
             +L+   + V     QE A       P    +   G+             L +++   G
Sbjct: 8   DADLDGFRDSVRKFLQQEAA-------PYHEQWEKDGQ---------VSRELWKKAGELG 51

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
             C      +  V     +          A L        S   A  +    +    + +
Sbjct: 52  FLCPTMPEEYGGVGADFRYSAVIMEEVSRAGLSGIGWTLHSDIVAPYILNYGSEEQKQYY 111

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKW 233
            PK+ + E                 + +TE   G+D+  + +   K + G  Y L+G K 
Sbjct: 112 LPKLATGEM-------------IGAIAMTEPGAGSDLQGVKTTAVKNASGDHYVLNGSKT 158

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++   +D  I++A+ + + G      LL + +  G    +  NK+G ++  T EL F 
Sbjct: 159 FITNGQLADLVIVVAKTDPKEGAKGTSLLLVESAWEGFEKGQNLNKVGMKAQDTSELFFQ 218

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGG 347
           +        L    G     +++  L +  + V          +    + Y + R   G 
Sbjct: 219 DVKVPADKLLGSMEGQGF-FQLMAELPAERLQVGLTAVAAAEAAWEWTLDYVKERKAFGK 277

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I     +  +A++  +I AA     R             E       A + K     +
Sbjct: 278 PVIAFQNTRFKMAEMKAEITAARVFCDRCLELH-------LEKKLDIPTAAMLKQHTTDL 330

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              V+ E ++  GG GY+ E  IAR + +S    I  G+   M   V  
Sbjct: 331 QCKVMDECVQLHGGYGYMWEYPIARAWADSRVQRIYAGTNEIMKEIVAR 379


>gi|121608311|ref|YP_996118.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552951|gb|ABM57100.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 396

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 137/391 (35%), Gaps = 22/391 (5%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +  R A  +  Q     P     D+ +  P   AL R+    GL       ++       
Sbjct: 19  DALRDAVRDFAQAE-IAPQAAEIDRSDQFPM--ALWRKMGALGLLGITVPETYGGAAMGY 75

Query: 132 -AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            AH +    +   +        + S    + +    +P   + + P++ S E+       
Sbjct: 76  LAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGSPEQKRKYLPRLISGEH------- 128

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                    L ++E   G+D+ ++  + +             W  + P +D  ++ A+  
Sbjct: 129 ------VGALAMSESGAGSDVISMQLRAEDKGGYYLLDGSKMWITNGPDADILVVYARTG 182

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G   +   L +    G    +  +K+G R + T EL F          L       +
Sbjct: 183 PGTGSQGITAFLIEKGMPGFGCAQRLDKLGMRGSPTGELVFDGVQVPAAQVLGGLDQGAK 242

Query: 311 DMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +   +  + A+++   +  M+  L   + Y   R   G  +    +++  +AD+   + 
Sbjct: 243 VLMSGLDYERAVLTGGPLGIMQSVLDHVLPYIHERQQFGQSIGQFQLIQAKVADMYTTLQ 302

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A ++ +A + D     +      R        WC + A  +  E ++  GG+GYI +
Sbjct: 303 AGRAFAYTVAKNLD--LLGTGHVRQVRKDCASAILWCAEKATWMAGEGLQIHGGNGYIND 360

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++    I  G+     + +   L
Sbjct: 361 YPLGRLWRDAKLYEIGAGTSEIRRMLIGREL 391


>gi|332527385|ref|ZP_08403441.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332111794|gb|EGJ11774.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 595

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 88/479 (18%), Positives = 162/479 (33%), Gaps = 63/479 (13%)

Query: 59  ELLGEYVLSCTAQELARMAN-YNTPQLHAYGPGGERWDK----VEFHPAWHALLRRSIHD 113
             +    ++   +E  + A     P   +    G   D     V     +     + +  
Sbjct: 31  AEIDADTINAVIEEAGKFAAGVAAPINASGDAEGCTLDPATHAVRTPKGFKQAYEQYVEG 90

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171
           G      D +F          +      ++        M P ++  +   L    T    
Sbjct: 91  GWPALSCDPAFGGQGLPV--LLNQCLYEMLNSANQAWTMYPGLSHGAYECLSAHGTEWQK 148

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + PK+ S E+  T             + LTE   GTD+  + ++ +   DG Y ++G 
Sbjct: 149 NTYLPKLTSGEWTGT-------------MCLTEPHCGTDLGMLRTKAEPQPDGTYRITGQ 195

Query: 232 KWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRL 275
           K F+S+   D       ++LA+  +   G   +   +            G  NG+    +
Sbjct: 196 KIFISAGEHDITPNIVHLVLARLPDAPAGSKGISLFVVPKFQVAADGSIGERNGIYCTAV 255

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G   NAT +L      G L+G+ N     +  M     L     ++     +   A
Sbjct: 256 EHKMGIHGNATCQLSLEGAVGTLVGEPNRGLQAMFVMMNAARLGVGCQALGLTETAYQMA 315

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R                  +I  P +++ +           AL+   A   D  
Sbjct: 316 VAYAKDRIQMRSLTGPKAPDKPADPIIVHPDVRKMLLTARAYAEGGRALALYTALLLDRE 375

Query: 384 KSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +  +E   A        + PI K +    A    +  M+  GGSGYI    I +  R++
Sbjct: 376 IASDDEDERAECADLVALLTPIVKAFMTDNAWIATSHCMQVFGGSGYIRGTGIEQFVRDA 435

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQDLG--SSGKKVITILRD 489
             N I  G+     LD+L     G N      F ++ +   ++ G   S ++ +  L D
Sbjct: 436 RINMIYEGTNTVQSLDLLGRKVLGDNGKKLKKFGRIVAEFIEEEGVNESMQEFVNPLAD 494


>gi|182680173|ref|YP_001834319.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182636056|gb|ACB96830.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 589

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 87/462 (18%), Positives = 163/462 (35%), Gaps = 47/462 (10%)

Query: 55  HKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSI 111
             E   +   +     +E  R+ AN   P   +    G   +   V     +    +  +
Sbjct: 28  LPEYSEINVDLARTVLEEAGRLCANVLRPINLSGDIEGCHLENGVVRTPKGFKEAYKAYV 87

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                       F      +  +I    +   + L  G +   S  +A  +    T  + 
Sbjct: 88  DGAWPGLSATPEFGGQGLPRTLQILVDEMLSGSNLSFGLIPGLSRGAAETIEAHATQELK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+    +                + LTE + G+D+  + +      DG Y +SG 
Sbjct: 148 EKYLPKMIEGIW-------------TGAMALTEAQAGSDLGLLKATATPREDGSYTVSGS 194

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F+SS   D       ++LA++ G       +  FL P+ L +     GS N +    L
Sbjct: 195 KIFISSGDQDLSENVIHLVLARLPGAPAGSRGISLFLCPKFLVNEDGSLGSRNNVNVGSL 254

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G  +  T  + + ++ G+L+G+ N     +  M     L   +  +     S   A
Sbjct: 255 EHKMGIHAQPTCVMNYDDSQGWLVGEPNRGLNAMFTMMNAERLFVGVQGLGLAEASYQTA 314

Query: 336 IHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             YA+ R             +I+ P +++ +  I   + AA AL+   A   D+ K+  +
Sbjct: 315 ASYAKERKQGRTPGGKDTTSIIEHPDVRKMLLTILSFVEAARALTVFTALEMDKEKAHQD 374

Query: 389 EAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           EA          ++ P+ K               + +GG GYI E    +  R++    I
Sbjct: 375 EATRKTASGLIALLTPVVKAAFTDFGFEATVLGQQVLGGHGYIREWGQEQFVRDARIAMI 434

Query: 443 LLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
             G+       L V  L+          F+ + Q L  S  +
Sbjct: 435 YEGTNGIQAQDLVVRKLILDDGAPVSTFFALISQTLSESASQ 476


>gi|170940105|emb|CAP65331.1| unnamed protein product [Podospora anserina S mat+]
          Length = 441

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 132/363 (36%), Gaps = 32/363 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           ++ +    G+        +          I               ++    T  +   + 
Sbjct: 99  IVEQLFEQGIMGVEIPEEYGGAGMNFTAAIVGIEELARVDPSVSVMVDVHNTLVNTAVIR 158

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + K + PK+               T+      L+E   G+D  A+ ++     +G
Sbjct: 159 WGSETLKKKYLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATPTENG 204

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +S  ++ FI+ A ++   G   +   + D    G    + + K+G +++
Sbjct: 205 YKINGSKMWITNSMEAEFFIVFANLKPEQGYKGISAFIVDKGMKGFSIAKKEKKLGIKAS 264

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHY 338
           +T  L F +         N+     +  K  I  L+   + +      LA      A+ Y
Sbjct: 265 STCVLNFDDVEVP---KENLLGQEGQGYKYAIQILNEGRIGIGAQMTGLALGAWENAVKY 321

Query: 339 A-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G ++ +   M+  IA    +IAAA AL +  A   +  +    +AA A    
Sbjct: 322 VWNDRKQFGKLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGEDFVMDAAMA---- 377

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N  +  +  +
Sbjct: 378 ---KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKM 434

Query: 458 LEK 460
           L+K
Sbjct: 435 LQK 437


>gi|121598571|ref|YP_994760.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           SAVP1]
 gi|124383435|ref|YP_001027802.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia
           mallei NCTC 10229]
 gi|126448074|ref|YP_001082251.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           NCTC 10247]
 gi|254357322|ref|ZP_04973596.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei
           2002721280]
 gi|121227381|gb|ABM49899.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           SAVP1]
 gi|124291455|gb|ABN00724.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia
           mallei NCTC 10229]
 gi|126240944|gb|ABO04037.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei
           NCTC 10247]
 gi|148026386|gb|EDK84471.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei
           2002721280]
          Length = 378

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++  V     + +        A    
Sbjct: 28  PHHERWEEQGYVD--RDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIASAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|218782175|ref|YP_002433493.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763559|gb|ACL06025.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 382

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 145/400 (36%), Gaps = 40/400 (10%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           QE+ R A  +  +     P     D+  EF P    L +     GL        +     
Sbjct: 9   QEMIRDAVRSFAE-KEIAPVALELDEKEEFSP---ELTKAMGEIGLFGMFVPEVYGGQEM 64

Query: 130 KQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++ I    +  +   +A  + + +      +    +    K + PK+ + E      
Sbjct: 65  DYISYAIAVEEVARIDGSQAATVAAGNSLGIGPINYFGSEEQKKKYLPKLCTGE------ 118

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIM 245
                     G GLTE   G+D     +   K  +  + L+G K F+++   +      +
Sbjct: 119 -------ALWGFGLTEPEAGSDAGGSKTTAVKDGNE-WILNGSKIFITNAACELSLGVTV 170

Query: 246 LAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            A       G       L +    G   + +  K+  RS++T EL F N     L + ++
Sbjct: 171 QAVTGTRADGRPETTCFLLEHGTPGFTAKAMHKKLMWRSSSTAELYFDNVR---LKEDSI 227

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P +  K ++       L    M + G + +   A+ YA++R   G  +         
Sbjct: 228 LGKPGDGFKQMLKTLDGGRLSIGAMGLGGAQGAYELALKYAKQRKQFGQPISKFQANAFK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD A++I  A  L ++      + +   +       +A + K +C ++   V   A++ 
Sbjct: 288 LADCAMEIECARNLLYKACWLRSQHRPFQK-------LASMAKLYCSEVMYRVANHAVQI 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG G ++E ++ R YR+     I  G+     L +   +
Sbjct: 341 HGGYGLMKEYNVERFYRDQKLLDIGEGTSEIQRLVISRYI 380


>gi|327478975|gb|AEA82285.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 596

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 81/453 (17%), Positives = 157/453 (34%), Gaps = 52/453 (11%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHC 117
           L   ++    +E AR        L+      G   +  +V     +    ++ + +G   
Sbjct: 31  LDRELIDGVLEEAARYTGGEIAPLNRNSDEEGVTLENGEVRTPQGFVEAYKQYVDNGWAS 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +      Q        + + A L        +  +   +    +  +   +  K
Sbjct: 91  MTGPTEYGGQGFPQLVACNFHEMLMGASLSFRIYSGLTEGAVLALYKHGSDELKNAYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S  +  T             + LTE + GTD+A + ++ +  +DG Y +SG K F+S 
Sbjct: 151 LVSGRWSGT-------------MCLTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISG 197

Query: 238 PMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGN 281
              D       ++LA+  +   G   +  LL            G+ N L    +++K+G 
Sbjct: 198 GEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADGTPGARNALSCGAIEHKMGI 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +  AT  + F    G+++G+ N     +  M         +  +     +   ++ YAR 
Sbjct: 258 KGAATCVMNFDGATGWIVGEPNQGLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARE 317

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388
           R  S G             +I  P ++R +      +  +  L+   A   D      E 
Sbjct: 318 RLQSRGLAGAQHPDKPADPIIVHPDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEP 377

Query: 389 -----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 +  A ++ PI K +   M   V +  ++  GG GYI E  + +  R+S    + 
Sbjct: 378 SYRKAASKRAALLIPIVKAFFTDMGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLY 437

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
            G+     LD +   LL  G      L +   +
Sbjct: 438 EGTNGIQALDYIRRKLLGDGGAELSALQAEFSE 470


>gi|284043053|ref|YP_003393393.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947274|gb|ADB50018.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 396

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 140/375 (37%), Gaps = 31/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E W++  F  +   ++RR    G         +          +  A     A    
Sbjct: 42  PHAEEWEETTFPDS---VIRRMGELGFLGLSVPEQYGGQGGDYYANLVLAEEMAGAHSGG 98

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +  +   +    T    + +               P  +      +G+TE  
Sbjct: 99  LAMGVAVHTDMATPPILAFGTEEQKQRYL-------------TPAMRGEKISCIGITEPD 145

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLED 264
            G+D+A I ++  +  D  Y ++G K ++++     +I+L    G    G       + D
Sbjct: 146 AGSDVAGIKTRAVRDGDD-YVINGSKTYITNGHRADYIVLMTKTGDNDSGYDGFTVFIVD 204

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+  ++   K+G  ++ T  L F +       +LG++      +        L  A
Sbjct: 205 MDLPGVIREKRLEKLGMHASDTALLAFQDVRVPADAVLGEVGKGFYHIMWELQGERLIGA 264

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              VSG +++  + + YA  R   G  +    V +   A++A  I +A  + +  A  F+
Sbjct: 265 AGCVSGAQLAFDKTLEYALERTAFGRQIGKFQVTRHKFAEMATKIESARQMVYTTAWRFN 324

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    E + A++ A        ++A  V  E ++  GG+GY++E  I R +R+   N 
Sbjct: 325 NGEYPVREISMAKLHAA-------RIAVEVADECIQIHGGAGYMKEYGIERVWRDMRLNR 377

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M+  +  
Sbjct: 378 IGAGTDEIMLDVIGR 392


>gi|193652742|ref|XP_001942523.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 3 [Acyrthosiphon pisum]
 gi|328705315|ref|XP_003242761.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Acyrthosiphon pisum]
          Length = 403

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 145/379 (38%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK++  P+    +++    G+   + D+ +            A           
Sbjct: 43  PIAAKLDKMQMFPS--DQIKQLADLGILGVVVDKKYGGSGADSLALSIAVEEISRCCGGT 100

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G ++S      A ++  + TP     + P   SR              +     L+E   
Sbjct: 101 GSIVSIHNALYAGIINRVGTPEQKLQFLPDFISR-------------GIVGCFALSEPGS 147

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A + +  ++  D         W  +     A I++A+ +   G   V   +   + 
Sbjct: 148 GSDAANMHTIAKREGDHWILNGTKAWVTNGIEGGAIIVMARSDIFKGHNGVSAFIVPTNT 207

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   +  +K+G R+ ++  +   N         N+     +  KI +  +D A + ++
Sbjct: 208 PGLTKGKRDDKLGIRAASSCNIILDNVIVPA---ENMLGNEGDGFKIAMSGIDLARIGIA 264

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +++     AI YA  R   G  +I    +++ +A +A  + A+  L+++ A   D
Sbjct: 265 SQALGISQAAMDCAIDYAGNRTAFGNAIIKLSAVQQRLAKMATRLEASRLLTWKAAWLRD 324

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++ A+ A++ A  T       A  V    ++ +GG GYI +    RHYR++    
Sbjct: 325 NNQPFTKAASMAKLEASQT-------ATYVTHNCIQILGGIGYIADMPAERHYRDARITE 377

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G  +   L +   L K
Sbjct: 378 IYAGPTDIQYLVIAEKLAK 396


>gi|26327643|dbj|BAC27565.1| unnamed protein product [Mus musculus]
          Length = 625

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 84/483 (17%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              I  G+   + L +    L   G  L  ++      ++ +  + +   LRDS+    +
Sbjct: 425 ILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVD 484

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +L  SA                 L R G N + +  +  R  +   + 
Sbjct: 485 LGLTGDLGVVHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANVLINL 544

Query: 542 HCM 544
           + M
Sbjct: 545 YGM 547


>gi|254467375|ref|ZP_05080786.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206688283|gb|EDZ48765.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 382

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 82/413 (19%), Positives = 144/413 (34%), Gaps = 43/413 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + + +E ++L E        E A       P+   +   G                +++ 
Sbjct: 7   AWMTEEHQMLAEMTAQFITNEWA-------PKFETWRKQGM---------MDRETWQQAG 50

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +        H+         A L +      S   A  +    T    
Sbjct: 51  ELGLLCPSVPEEYSGAGGDFGHEAVILMEGSRANLASWGHGIHSGIVAHYILAYGTEEQK 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E             +   L +TE   G+D+ AI ++  K  +  Y LSG 
Sbjct: 111 QRWLPKMVTGE-------------LVGALAMTEPSTGSDVQAIKTKAVKDGNA-YRLSGQ 156

Query: 232 KWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++      I + A+ +   G   V  + +E     G    R  +KIG  +  T EL
Sbjct: 157 KTFITNGQHANLILVAAKTDPAAGAKGVSLVAVETDGAAGFSRGRNLDKIGCHAADTSEL 216

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            FS+        L      G  + M+ L    L  A  +V  M  ++   + Y + R   
Sbjct: 217 FFSDVEIPPENILGGAEGQGFYQMMQQLPQERLIIACGAVGAMEGAVERTVAYCKEREAF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG ++     +  +A+       A A         DE  +   E   +   A + KYW  
Sbjct: 277 GGPILQFQNTRFKLAECLTKTKVARAF-------LDECIAEHLEGRLSVEKAAMAKYWIT 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                V+ E ++  GG GY++E ++   + ++    I  G+   M   +   L
Sbjct: 330 DTQGEVLDECLQLHGGYGYMQEYAVGEMWADARVQRIYGGTNEIMKELIARSL 382


>gi|297618260|ref|YP_003703419.1| Butyryl-CoA dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146097|gb|ADI02854.1| Butyryl-CoA dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
          Length = 388

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 143/408 (35%), Gaps = 32/408 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQ-LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   + L +     + + L       +   +    P W  +       GL      
Sbjct: 2   DFALSLDQKTLMKDIEEFSRRYLAPIAAECDEKQEFIPTPIWRKMASLGYC-GLPIPTGY 60

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                        + AA     A           V  +  +    T    K + P+I   
Sbjct: 61  GGAGLGALDTYMCLEAAGRGGAAAGHLLSWAVSMVLGSVALIKFGTEEQKKRYLPRI--- 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMS 240
                         +     LTE   G+D  +I +Q  +  D  Y L+G K F  + P++
Sbjct: 118 ----------ANGDLICAFCLTEPDAGSDAGSIRTQAVRRGD-YYILNGTKSFVTNGPIA 166

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  ++       +G   +   L + S  G    +  NK+G RS+ T EL FS+       
Sbjct: 167 DLCLVFVSTNPDMGPRGISVFLVESSFPGFSRGKKLNKLGVRSSPTSELIFSDCEVPA-- 224

Query: 301 DLNVSTGPVEDMKILIY--LDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             N+     E  KI+ +  L+    +    +  M  +L   I YAR R      + +   
Sbjct: 225 -ENLLGAEGEGFKIVAHQILEWERANFSFFLGVMDYNLQTCIKYARERIQFKRPIAEFQA 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++ +++ AA  + +R+A   D+          A I A   KY+  +        
Sbjct: 284 IQHMLAEMKVELDAAKLMCYRVAWMIDQGMVP------APIEASSAKYFLAQALKKNADY 337

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           A++  G +G ++E  + R  R+     I  G+    +  +   L  G 
Sbjct: 338 AVQIHGANGMMKEYPLERSLRDYKILEIGGGTTQIQLDIIARNLLGGG 385


>gi|149724237|ref|XP_001504811.1| PREDICTED: acyl-Coenzyme A dehydrogenase, very long chain isoform 1
           [Equus caballus]
          Length = 655

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 80/415 (19%), Positives = 162/415 (39%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I S     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRSSAVPS 235

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 236 PCGKYYTLNGSKIWISNGGLADIFTVFAKTPVTDAATGAVKEKITAFVVEKSFGGVTHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F          L    G     K+ ++ L++    ++       
Sbjct: 296 PEEKMGIKASNTAEVYFDGVRVPSDNVLGEVGG---GFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 353 KGIIAKAVDHAANRTQFGEKIHNFGIIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 410

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 411 ----FQIEAAISKIFGSEAAWQVTDECIQIMGGMGFMKEAGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS----------- 492
            + L V     + KG  L  +L S L+   G++G    +    L+               
Sbjct: 467 ILRLFVALQGCMNKGKEL-SKLGSALKNPFGNAGLLLGEAGKQLKRRAGMGSGLSLSGIV 525

Query: 493 --LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D+    + M+
Sbjct: 526 HPDLSRSGELAVQALEQFATVVEAK-LIKHKKEIVNEQFLLQRLADSAIDLYAMV 579


>gi|296269787|ref|YP_003652419.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092574|gb|ADG88526.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 131/348 (37%), Gaps = 30/348 (8%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +    +     +R       A L  G  +S    +   VA   T    K+  PK+
Sbjct: 57  PYPEEYGGGGQPYEVYLRVVEELAKAWLAVGLGVSVHTLACFPVAAYGTEEQRKELLPKM 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E+                  L+E   G+D AA+ ++     DG        W     
Sbjct: 117 LGGEW-------------LGAYCLSEPHSGSDAAALRTRAAADEDGYVIDGVKAWITHGG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D + ++A+     G   +         +GL +   + K+G RS+ T ++ F       
Sbjct: 164 VADFYTLMARTSDE-GARGISCFHVPAGVDGLSFGAPERKMGMRSSPTAQVRFDGVR--- 219

Query: 299 LGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQ 352
           L    +     E  KI +  LD   + ++   V +A+A       YA+ R   G  + D 
Sbjct: 220 LRREALLGAEGEGFKIAMAALDGGRLGIAACAVGVAQAAFEAASRYAKERRQFGSRIADF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A  I+AA AL    A   D  +    +AA A       K +   M   V 
Sbjct: 280 QGISFMLADMATQISAARALYLEAARLRDAGRPYGTQAAMA-------KLFATDMCMKVT 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++  GG GY+E+  + R+ RE+    I+ G+     L +   + +
Sbjct: 333 TDAVQVFGGYGYVEDFPVERYMREAKVLQIVEGTNQIQRLVIGRAIAR 380


>gi|325193598|emb|CCA27878.1| mediumchain specific acylCoA dehydrogenase putative [Albugo
           laibachii Nc14]
          Length = 423

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 128/362 (35%), Gaps = 30/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H +  +    GL  +     F  +       +  A                +  +++ + 
Sbjct: 80  HEIFAKVWELGLLNTHIPERFGGIGLGALDGLVIAEELAYGCSGMATAFEGNHLASAPIL 139

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +       K +  ++     +P   A            +TE   G+D+AA+ +   K  D
Sbjct: 140 VAGNDEQCKKYFGRLLE---EPRKAA----------YCVTEPGAGSDVAALRTSAVKKGD 186

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  +  ++D + +LA+ +            + D +  G+   R +  +G R
Sbjct: 187 KWVINGTKMWITNGSVADWYFVLAKTDANAKARKAFSGFIVDANSPGITVGRKEINMGQR 246

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F         + N+   P +  +I +          AI+SV   R +  EA 
Sbjct: 247 CSDTRSITFEEVAVP---EANLLGQPGDGFRIAMQAFDITRPPVAIISVGLARRAFEEAQ 303

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+  R   G  +     +   +AD+A  I A   LS+R A   D  +S +       + 
Sbjct: 304 KYSMERKTMGAPIATHQAVSFMLADMATGIEAGRMLSYRAAYELDCGRSNT-------LY 356

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +    A    A+A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 357 ASMAKRFAADHANQCAADAVQIFGGAGFNTEYPVEKLMRDAKILQIYEGTSQIQRLIMGK 416

Query: 457 LL 458
            L
Sbjct: 417 EL 418


>gi|326318789|ref|YP_004236461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375625|gb|ADX47894.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 601

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 90/476 (18%), Positives = 164/476 (34%), Gaps = 64/476 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +     + +  G      D  +          +      ++        M P 
Sbjct: 74  EVATPKGFKDAYAQYVEGGWAALSCDPEYGGQGLP--FVVNQCLYEMLNSANQAWTMYPG 131

Query: 156 VTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           ++  +  AL    T    K + PK+ S E+  T             + LTE   GTD+  
Sbjct: 132 LSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGTDLGL 178

Query: 214 ITSQGQKISD---GIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED 264
           + ++ + ++    G Y ++G+K F+S+   D       ++LA+  +   G   +   +  
Sbjct: 179 LRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISLFVVP 238

Query: 265 ----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
                     G  N +    L++K+G   NAT ++      G L+G  +     +  M  
Sbjct: 239 KYQVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQPHKGLQAMFVMMN 298

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADI 362
              L     S+    V+   A+ YA+ R                  +I  P +++ +   
Sbjct: 299 AARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVHPDVRKMLLTA 358

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAM 416
                 A AL        D+A S  +E           ++ PI K +            M
Sbjct: 359 KAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITDNGHIATNACM 418

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQLFST 471
           +  GG G+I+E  + +  R++  N I  G+     LD+L     G N      F +L   
Sbjct: 419 QVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGATLKKFGKLVGK 478

Query: 472 LEQDLGSSGKKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522
           L ++ G + K       I  L D ++    + G   F       A++   L  AG 
Sbjct: 479 LVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGH 534


>gi|71064718|ref|YP_263445.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71037703|gb|AAZ18011.1| probable acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 606

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 85/473 (17%), Positives = 165/473 (34%), Gaps = 58/473 (12%)

Query: 69  TAQELARMANYNTPQL-HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             Q +A  A      L       G  ++   V     +     + +  G     +   + 
Sbjct: 42  ILQGMADFAENVLAPLYQPADAEGCHFENGVVTTPKGFKEAYDQFVEGGWQGISYPEEYG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  A +   A          S    + +    T    + +  K+    +  
Sbjct: 102 GMNLPTSLNLIKAEMIGTANWPWAMYPGLSTGCINTIIQYGTAEQKETYLHKLVEGSWAG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + S+     DG Y LSG K F+SS   D    
Sbjct: 162 T-------------MCLTEPQCGTDLGQVKSKAIPQDDGSYKLSGTKIFISSGEHDLTEN 208

Query: 242 -AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+ L +     G  NG+    +++K+G  S+AT  L
Sbjct: 209 IIHIVLARLPDAPEGTRGISLFIVPKFLPNAEGNIGERNGVSCGSIEHKMGINSSATCVL 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VS 345
            F +  G+L+G+ N     +        + + I  ++   +S   A+ YA+ R     +S
Sbjct: 269 NFDDAVGYLIGEPNKGLKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLS 328

Query: 346 GGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAKSRSE 388
           G          +I    ++R +           ++ +  A   D         + +   +
Sbjct: 329 GTKEPEKVADAIIHHADVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEK 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  ++         +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKLGFYTPILKGFLTELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTG 448

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKE 496
              LD+L    +L+    +     S++ +  G     K +   +     LC E
Sbjct: 449 IQALDLLGRKVILQSKGKIIRDYTSSIMKWCGEYALDKDMRKFVWALTKLCAE 501


>gi|16126042|ref|NP_420606.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|221234812|ref|YP_002517248.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13423230|gb|AAK23774.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|220963984|gb|ACL95340.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 381

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 128/358 (35%), Gaps = 32/358 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL       S+  +      + R    +   A        +     +  + +        
Sbjct: 47  GLFGLSIPESYGGLGLSLEEEARVIVAFCHTAPAFRSTFGTNVGIGSQGLVMFGDEAQKA 106

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P I S E                   LTE   G+D A++ ++  +  D        +
Sbjct: 107 RWLPSIASGE-------------TITAFALTEAEAGSDSASVQTRAVRDGDHYVLNGVKR 153

Query: 233 WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +  ++  ++ F ++A+ +    G   V   L      GL   + + K+G +     ++ F
Sbjct: 154 YITNAGRANLFTVMARTDPNTKGGAGVSAFLVPADLPGLSVGKPEKKMGQQGAHIHDVVF 213

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            +    +    N      E   + +  LD   + +S + V +AE      + YA  R   
Sbjct: 214 EDVRVPV---ENRLGAEGEGFTVAMRVLDRGRVHISAVCVGVAERLIADCVAYASERKQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  IAD   +  AA AL F  A   D   + + EAA        TK +  
Sbjct: 271 GQPIASFQLIQAMIADSKTEALAAKALVFDTARKRDAGANVTLEAA-------ATKLFAS 323

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGT 462
           +M   V   A++  GG+GY+ +  I R YR+     I  G+     L +    L++G 
Sbjct: 324 EMVGRVADRAVQVFGGAGYVADYGIERLYRDVRIFRIYEGASQIQQLIIARETLKRGG 381


>gi|126337974|ref|XP_001369381.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 430

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 126/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL           V         A      +       +  S  +   +A
Sbjct: 87  RELWEKAGKQGLLGINIAEKCGGVGGDVLSMAIAWEEQAYSNCTGPGFVLHSDIAMPYIA 146

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P++ + +                 + +TE   G+D+  + +  +K   
Sbjct: 147 NYGSEEQIKRFIPEMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKKDGS 193

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++  M D  I++A    E R     +   L +    G    R  +K+G
Sbjct: 194 D-WILNGSKVFITNGWMCDVVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMG 252

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 253 LKAQDTAELFFEDVRLPASALLGEENKGFYYLMAELPQERLAIADLAISACEFMFEETRN 312

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 313 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHEAKRLDSATA 365

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 366 SMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKSYVDARVQPIYGGTNEIMKELIARD 425

Query: 458 L 458
           +
Sbjct: 426 I 426


>gi|91788978|ref|YP_549930.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698203|gb|ABE45032.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 575

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 81/469 (17%), Positives = 159/469 (33%), Gaps = 54/469 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGER-WDKVEFHP-AWHALLRRSIHDGLHCSIW 120
            ++     E  +        L       G +  D     P  +    +     G      
Sbjct: 36  ELMRQVLDEAGKFVTQEVAPLQGVGDAIGCKFVDGSVIAPLGFKDAYQAFWQAGWPALAC 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
                         + A    +++    G  M+P +   +   L    +  +   +  KI
Sbjct: 96  APEDGGQGLPA--LLEAVLYEMLSAANHGWTMAPGLLHGAYECLKHHGSDELKARYLSKI 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                + LTE   G+D+  + ++     DG + LSG K F+S  
Sbjct: 154 ATGEW-------------LATMCLTEPHAGSDLGLVRTKAMPQPDGSFLLSGTKIFISGG 200

Query: 239 MSD-----AFIMLAQVEG----------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             D       ++LA++ G           +  FLVP+ + DG+ + +  +R++ K+G   
Sbjct: 201 EHDLTDNIVHLVLARLHGPGIEAPPGPKGLSLFLVPKFMPDGTRSPVHCERIEEKMGLHG 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           + T  + F +  G+++G+       +  M     L  A+  +  +  +  +A  YAR R 
Sbjct: 261 SPTCVMRFDDATGWIVGEPGRGLSAMFVMMNAARLHVALQGIGLLDAAWQKADAYARERR 320

Query: 344 VSGGI-----------LIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSR 386
                           +   P ++R +      I     L++       +A    +A  R
Sbjct: 321 QMRVPGQRNSAEAADLIAGHPAIRRILDTQRAWIDGGRLLAYKTGIELDIARHHPDAARR 380

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                +  ++ P+ K      A    ++ ++  GG GY++E  I +  R+S    I  G+
Sbjct: 381 GSAQRWCSLVTPVLKAALTSQAFHGASDCLQVFGGHGYVKEWGIEQIVRDSRVTMIYEGT 440

Query: 447 GNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
                  L V  +L  G +    L   L   L +       +L     L
Sbjct: 441 NEVQAIDLLVRKVLPDGGSALAALLDELGDALDAGNAAHAELLSRFAGL 489


>gi|294629484|ref|ZP_06708044.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832817|gb|EFF91166.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 146/400 (36%), Gaps = 39/400 (9%)

Query: 78  NYNTPQLHAYGP----GGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
           +  TP+L                    D  E H   + ++R     GL    +   +  +
Sbjct: 3   HRLTPELEELRRTVEEFAHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEYGGM 62

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A  I    L  +    A  L +     A  + L  T    + W PK+ + E    
Sbjct: 63  GGDYLALGIALEELARVDSSVAITLEAGVSLGAMPIHLFGTEEQKRQWLPKLCAGE---- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD--AF 243
                    +    GLTE  GG+D  A  +  +   + G + ++G K F+++  +D    
Sbjct: 119 ---------ILGAFGLTEPDGGSDAGATRTTARLDEESGEWVINGAKCFITNSGTDITGL 169

Query: 244 IMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           + +  V GR   G  L+  ++      G       +K+G  ++ T EL F +        
Sbjct: 170 VTVTAVTGRKSDGRPLISSIIVPSGTPGFTVAPAYSKVGWNASDTRELSFQDVRVPAANL 229

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G  + ++IL    +  A ++    +  + E++ YA+ RH  G  +     ++  
Sbjct: 230 LGEQGRGYAQFLRILDEGRIAIAALATGLAQGCVDESVKYAKERHAFGKPIGANQAIQFK 289

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD+ +    +       A      +   +EAA A       K +   +A     +A + 
Sbjct: 290 IADMEMKAHTSRLAWRDAAYRLVAGEPFKKEAALA-------KLYSSTIAVDNARDATQI 342

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 343 HGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|284165847|ref|YP_003404126.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015502|gb|ADB61453.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 378

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 125/357 (35%), Gaps = 21/357 (5%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +        L       ++                     L     +S    + S +A 
Sbjct: 38  EIWDGLAELDLTGLTVPEAYGGYDADPITAAIVNEEVAYGALAVATALSVHSLATSCIAE 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + W P+             M          L+E   G++ A + ++  +  D 
Sbjct: 98  FGNDAQRERWLPE-------------MAAGRPVGAFALSEPHAGSNPAEMATEASREGDE 144

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  +W  +   +  +I+ A+ + R     V + L  G  +GL     ++K+G R++
Sbjct: 145 YVINGEKQWITNGQRAGVYILFAKTD-RDDPNSVTQFLVPGDVDGLSVGEKEDKLGLRAS 203

Query: 285 ATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L F +    +     +          +     +  A  SV   + +L EA+ Y++ 
Sbjct: 204 DTTSLTFDDVRIPVENRLTEEGKGLSAAFHILTGGRIAIAAQSVGLAQCALDEALAYSQE 263

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +   ++  +A++A    AA +L+   A +  E  +    A    + A + K
Sbjct: 264 REQFGDPIAEIQSIRHKLAEMATRTKAARSLTRHAARTRHETDADGTGA----LEASMAK 319

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+  + A  V  EA++  GG GY+ E  + R YR++    I  G+       +   L
Sbjct: 320 YFASETAMFVTNEAVQIHGGYGYVTEGEVERLYRDAKITEIYEGTTEIQKTVIAREL 376


>gi|256374678|ref|YP_003098338.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255918981|gb|ACU34492.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 73/349 (20%), Positives = 131/349 (37%), Gaps = 30/349 (8%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   F    +     ++A      A +     +S  V S+  +    TP     W P  
Sbjct: 57  PYPEDFGGSAQPYEVYLQALEEVATAWMSVAVGLSVHVMSSYALVNFGTPEQRAKWLPDA 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E             +  G  L+E   G+D AA++++  +  D         W     
Sbjct: 117 LGGE-------------LLGGYALSESHAGSDAAALSTRAVREGDEYVVRGTKAWITHGG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D + ++A+  G  G   V      G  +GL     + K+G   + T +L F       
Sbjct: 164 VADFYTLMART-GEPGGRGVSCFFAPGELDGLSAAAPERKMGLTGSVTAQLTFDGAR--- 219

Query: 299 LGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
            G   +     + M+I +       L  A  +V   + +L EA+ YAR R   G  +I+ 
Sbjct: 220 FGADRLIGAEGDGMRIALSALDSGRLGIAACAVGLAQAALDEAVAYARGRSQFGRPIIEF 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A  + +A A     A   D     + +AA       + K  C   A  V 
Sbjct: 280 QGLEFLLADMAAAVDSARATYLDAARRRDRGLPFTRQAA-------VAKLVCTDAAMKVT 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +A++ +GG+GY  +  + R+ RE+    I  G+     + +   L K 
Sbjct: 333 TDAVQVLGGAGYTRDFPVERYMREAKVLQIFEGTNQIQRVVIGRALRKA 381


>gi|219664379|gb|ACL31229.1| acyl-CoA dehydrogenase [Rhodococcus sp. TFB]
          Length = 383

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 137/376 (36%), Gaps = 40/376 (10%)

Query: 97  VEFHPAWHALLR-------RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V F  AW            +    G         +  +                A     
Sbjct: 25  VPFRAAWDRAESVDTAIIPKLGEIGFFGLTIPEEYGGLGGDYITYCIGMEELGRADSAVR 84

Query: 150 HLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++S S+     ++    T    + W P I                +     GLTE   G
Sbjct: 85  GIVSVSMGLVGKVILSHGTEEQKQRWLPGI-------------ADGTTLACFGLTEPDTG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D   + ++  +  D  + L+G+K F+++   +D  ++ A+  G  G   V   L     
Sbjct: 132 SDAGNLKTRATRDGDD-WILNGNKIFITNGTWADVCLVFART-GGPGPKGVSAFLVPTDT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            G     +  K+G R  AT EL F            +     +  KI ++ LD   +SV+
Sbjct: 190 PGFGRTEIHGKLGLRGQATAELSFDGVRVPASA---LLGAEGDGFKIAMHSLDKGRVSVA 246

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V + +        Y+ +R   G +L    +++  IADI++D  AA  L++R AN  +
Sbjct: 247 AGCVGIIQGCLEAVVDYSTQRQQFGRLLASFQMIQDMIADISVDADAARLLTWRAANLIE 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +     A+ A       KY+  + A      A++  GG GY++E  + ++ R++   +
Sbjct: 307 RGEPFGTAASKA-------KYFASEAAVRAANLAIQAFGGYGYVDEYPVQKYMRDARVMT 359

Query: 442 ILLGSGNAMVLDVLNL 457
           +  G+     L +   
Sbjct: 360 LYEGTSQIQKLLIGRA 375


>gi|254437657|ref|ZP_05051151.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198253103|gb|EDY77417.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 387

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 141/375 (37%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P   AL R     GL     D ++        AH +    +   +   
Sbjct: 31  PMAAQIDRDNLFPT--ALWREMGDLGLLGVTVDETYGGAGMSYLAHTVAVEEIARGSASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + + L  T      + P++ S ++                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIKLNGTEAQKSQYLPRLVSGDH-------------VGALAMSEAGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ +++ + ++ +D         W  +   +D  ++ A+ +   G   +   L + S 
Sbjct: 136 GSDVVSMSLRAERRNDHYVLNGTKYWITNGAEADTLVVYAKTDPSAGSRGITAFLIEKSM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +K+G R + T EL F +       +LG+       +        +  A + 
Sbjct: 196 IGFTTSAHFDKLGMRGSNTAELVFDDVQVPFDNVLGEEGRGVRVLMSGLDYERVVLAGIG 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L E + Y  +R   G  + +  +M+  +AD+   + +A A  + +A + D+  
Sbjct: 256 LGIMAACLDEVMPYIAQRKQFGEPIGNFQLMRGKVADMYTALNSARAYVYEVAKACDKGT 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +AA           +  + A     +A++ +GG+G++ +  +AR +R++    I  
Sbjct: 316 VTRADAA-------ACCLYASEQAMVQAHQAVQALGGAGFMADAPVARLFRDAKLMEIGA 368

Query: 445 GSGNAMVLDVLNLLE 459
           G+     + +   L 
Sbjct: 369 GTSEIRRMLIGRELM 383


>gi|23098269|ref|NP_691735.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776494|dbj|BAC12770.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 565

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 149/393 (37%), Gaps = 34/393 (8%)

Query: 95  DKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHL 151
           D++E H        ++     GL  +     +  +   K+   I A ++   A       
Sbjct: 64  DQLEDHDYTLQKKRMKEVGQLGLMGAEVPEEYGGLEAGKRMSGIIAEKMGYAASFSVAFN 123

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   V +   V           + PK+ S E+                  LTE   G+D 
Sbjct: 124 IHSGVGTLPYV-YFGNEAQKNQYLPKLASGEW-------------VGAYALTEPNAGSDA 169

Query: 212 AAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A  +  +    +  + ++G K W  ++ +++ +++ A  E       +   + + +  G
Sbjct: 170 LASKTTAKWNDENQTWTINGEKQWITNAHIANVYVVFANTE-----QGITAFIVERTFKG 224

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +     + K+G + ++T  L   +       +LG++        ++  L  L  A  ++ 
Sbjct: 225 VSIGPEEKKLGIKGSSTATLILEDVELDSAQVLGEVGKGHRIALNILNLARLKIAFSNIG 284

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-S 385
             + +L  AI Y + R   G  +++  +++  IA++A  I  +   ++  A+  D     
Sbjct: 285 MSKQALEFAIKYGKDRQQFGKNIVEFGLIQEKIANMATAIYKSECTAYYTASLLDRQLID 344

Query: 386 RSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             +E      A   +   I K    +    ++ EA++  GG GY++E  + R YR+S  N
Sbjct: 345 NGKENFISSLARFSMDCSINKVLASESLDMIVDEALQIHGGYGYMQEYEVERLYRDSRIN 404

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
            +  G+     L +     K  +  E+L   + 
Sbjct: 405 RLFEGTSEINRLTIAKSFLKQYDE-EKLNEEIR 436


>gi|256824680|ref|YP_003148640.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256688073|gb|ACV05875.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 394

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 146/385 (37%), Gaps = 34/385 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAARLYLMAQL 146
           P  E+WD   + P    L+ +    GL   +    +       + A       +  + ++
Sbjct: 25  PHVEKWDAESYFPT--ELIPKMGELGLFGLVVPEEYGGAGMAEEGAFTYLCLAIEELGRV 82

Query: 147 EAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +    ++ S       + +         + W P + +              +   G GLT
Sbjct: 83  DQSIGITLSAGVGLGINPILTYGNDEQKQKWLPDLVAG-------------NALAGFGLT 129

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVP 259
           E   G+D +   ++   + +G + ++G K F+++  +D      + A+      G   + 
Sbjct: 130 EPDAGSDASGTRTKA-SLENGEWVVNGAKSFITNSGTDITSCVTVTARTGTRENGKPEIS 188

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318
            ++      G   +    K+G   + T  L F N         N+  G  E  K  +  L
Sbjct: 189 AIIVPSGTPGFTVEPAYRKLGWHISDTHGLTFENCRVPES---NLLGGVGEGYKQFLKTL 245

Query: 319 DSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   +++S + V LA+A       YA+ R   G  +     +   IAD+ + + AA  L+
Sbjct: 246 DDGRIAISALAVGLAQACLEQTTQYAKTRTAFGKPIGAYQGVSFQIADLQVMVEAARVLT 305

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++ A   DE ++        +  A I K +  + A      A +  GG+G++EE  +AR 
Sbjct: 306 YKAAWLKDEQEAGRRSMQEVKKAASIAKLYSTEAAVTATRIATQVFGGNGFMEEYPVARF 365

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           YR++    I  G+     + +   L
Sbjct: 366 YRDAKILEIGEGTSEVQRMLIARGL 390


>gi|113671417|ref|NP_001038772.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Danio rerio]
 gi|108742117|gb|AAI17590.1| Zgc:136367 [Danio rerio]
 gi|182891452|gb|AAI64553.1| Zgc:136367 protein [Danio rerio]
          Length = 630

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 81/480 (16%), Positives = 171/480 (35%), Gaps = 51/480 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + D+    P     L      GL        +  +        R   +  +    A  L 
Sbjct: 96  KIDREANIP--PETLDGLKELGLFGIQIPEEYGGLGLSNTMYARLGEITSLDGSIAVTLA 153

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        + +  T      + PK+ + E+                  LTE   G+D A
Sbjct: 154 AHQAIGLKGILIAGTDAQKAKYLPKLATGEH-------------IAAFCLTEPGSGSDAA 200

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGS 266
           +I  +     DG  Y L+G K W  +   +D   + A+ E           +   + + +
Sbjct: 201 SIQLRATLTEDGKHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKKDKITAFIVERA 260

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+   + ++K+G R + T E+ F +T   +    NV     +  K+ +  L++   S+
Sbjct: 261 FGGVTSGKPEDKLGIRGSNTTEITFEDTKVPI---ENVIGEVGDGFKVAMNILNNGRFSM 317

Query: 326 SGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            G         +  +  YA  R      L +  +++   A +AL++    ++++  A   
Sbjct: 318 GGAGAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATMALNVYVMESMAYLTAGMM 377

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    + +     A + K +  +     ++EA++ +GG G+ +     R+ R+    
Sbjct: 378 D--RPGLPDCSL---EAAMVKVFSSEGTWICVSEALQVLGGLGFTKNYPYERYLRDCRIL 432

Query: 441 SILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--- 495
            I  G+   + + V    +   G  L  ++    + +LG   + +   ++D++       
Sbjct: 433 QIFEGTNEILRMYVALTGMQHAGKILTGKIKEMKKGNLGVVFEILGKKIKDTVQTADFGL 492

Query: 496 --EDKGLARFLTEKIALASSAA---------ALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             +D  +   LTE   +    A          LYR G   + +  L  +  D   + + M
Sbjct: 493 TGKDGVVHPSLTESAKMFEQNAACFGSTVEGLLYRYGKTIVDEQLLLKKVADVLINLYAM 552


>gi|87198153|ref|YP_495410.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133834|gb|ABD24576.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 572

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 88/470 (18%), Positives = 166/470 (35%), Gaps = 61/470 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KVEFHP 101
               A  P +V   +E +G +       E A       P   A    G +    +V    
Sbjct: 27  ERFAAATPDLVEAIVEGIGAFAAG----EWA-------PLHRAGDQVGAKCGNGRVTLPA 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R  +  G         F                   A +    L   +V +   
Sbjct: 76  GYVEAYRSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANMGFTLLPILTVGAIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +      + PK+ S E+  T             + LTE + G+D+ A+ S    I
Sbjct: 136 LDHHGSEAQKALYLPKLISGEWSGT-------------MNLTEPQAGSDVGALRSTATPI 182

Query: 222 SDG----IYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
           ++G     Y ++G K F++    DA      ++LA+  G       +  F+VP+   +  
Sbjct: 183 TEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVEQD 242

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G  ++ T  + + +     G ++G  N     +  M     +
Sbjct: 243 GSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSARI 302

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAA 369
           +     V     +  +A  YAR R  S            +I+ P ++R +  +      +
Sbjct: 303 NVGSQGVQIAERAFQQARTYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGS 362

Query: 370 TALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            AL +  A   D     +E A   A ++ P+ K W   +   V +  ++  GG G+IEE 
Sbjct: 363 RALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTDIGCEVASLGIQVHGGMGFIEET 422

Query: 429 SIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
             A+H R+S    I  G+       L    L      + + L + +  ++
Sbjct: 423 GAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEM 472


>gi|228988255|ref|ZP_04148351.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228771465|gb|EEM19935.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 608

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|126309240|ref|XP_001370412.1| PREDICTED: similar to Very-long-chain specific acyl-CoA
           dehydrogenase, mitochondrial precursor (VLCAD)
           [Monodelphis domestica]
          Length = 654

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 83/471 (17%), Positives = 170/471 (36%), Gaps = 56/471 (11%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALM 165
           ++     G            V        R   +  M  L     L +        + L 
Sbjct: 132 MQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLF 191

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            +    K + PK+ S E                   LTE   G+D A+I +     S G 
Sbjct: 192 GSDAQKKKYLPKLASGEN-------------LAAFCLTEPSSGSDAASIRTTAVPSSCGK 238

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K ++S+   ++ F + A+   +          +   + + S  G+     + K
Sbjct: 239 YYTLNGSKIWISNGGLAEIFTVFAKTPIKDESSGAVKEKITAFVVERSFGGVTNGPGEKK 298

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G +++ T E+ F           NV        K+ ++ L++    ++          +
Sbjct: 299 MGIKASNTAEVFFDGVKVPA---ENVLGEVGGGFKVAMHILNNGRFGMAAALAGTMKSII 355

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++++ D+          
Sbjct: 356 AKAVDHAANRVQFGDKIYNFGLIQEKLARMAVLQYVTESMAYMVSSNMDQGSKD------ 409

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L
Sbjct: 410 FQIEAAISKIFGSEAAWTVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL 469

Query: 453 DVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS-------------LC 494
            V     ++KG  L   L   L+   G++G    +     R                   
Sbjct: 470 FVALQGCMDKGKELTG-LGKALKNPFGNAGLLLGEAGKQFRRRTGIGSGLSLSGVVHPEL 528

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            +   LA    E+ A    A  L +     + + FL +R  D     + M+
Sbjct: 529 SQSGKLAVGALEQFATVVEAK-LIKYKKGIVDEQFLLHRLADCAIDLYAMV 578


>gi|288800850|ref|ZP_06406307.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288332311|gb|EFC70792.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 574

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 87/433 (20%), Positives = 165/433 (38%), Gaps = 43/433 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +  L  +   GL      R +  +         A+ +   A     ++ S        + 
Sbjct: 92  YENLDATRKAGLWGISMPRRYGGLNLPITPYSMASEMVATADAGFQNIWS-LQDCIETLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-IS 222
              +    + + P++ + E               + + LTE   G+D+ ++  +      
Sbjct: 151 EFGSEEQRQKYIPRVCAGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEE 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +G + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G 
Sbjct: 197 EGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRQGGVDVRHIEHKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L G   +     V  +     L  A  SV   + +  EA+ YA 
Sbjct: 257 HGSPTCELVYKNAKAELCGSTRMGLIKYVMALMNGARLGIAAQSVGVSQAAYTEALAYAE 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEA 390
            R      ++D P +   +A I   + A  +L ++ +   D          E K   EE 
Sbjct: 317 ERKQFDTAIVDMPAVYDMVARIKAKLDAGRSLLYQTSRYVDIYKALDDIARERKLTPEEK 376

Query: 391 A-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A        A    PI K    +       +A++  GGSG+I E    R YR++   SI 
Sbjct: 377 AEQKKYTRLADAFTPIAKGMNSEYVNQNTYDAIQVHGGSGFIMEYKSQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKV---ITILRDSISLCKED 497
            G+    V+  +  +  GT      E L + +  ++     +V   +  L ++I   KED
Sbjct: 437 EGTTQLQVVAAIRYITNGTYASMIQEMLQNEVSAEMQPLKDRVVKMVAKLEEAIEKVKED 496

Query: 498 --KGLARFLTEKI 508
             + +  FL  ++
Sbjct: 497 NNQEVLDFLARRL 509


>gi|259415225|ref|ZP_05739147.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259349135|gb|EEW60889.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 570

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 92/497 (18%), Positives = 180/497 (36%), Gaps = 48/497 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE----RWDK- 96
           LL  ++        +        +++    E  +M +     L     GG+    R +  
Sbjct: 13  LLQQILGYEQITATERFAEADNDLMAAILTEAGKMCDEVMAPLQ---RGGDLEPARLENG 69

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            +   P +    +     G      D  +  +    +       +   A L        S
Sbjct: 70  VLRTSPGFGDGYKAIAEGGWIGMSADPEYGGMGLPMSLTTSVNEMMSGACLSLQLAPLMS 129

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +    +  +   + PK+ S E+  T             + LTE + G+D+ A++
Sbjct: 130 QGQIEALEHHASDALKALYLPKLISGEWAGT-------------MNLTEPQAGSDVGALS 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED 264
           S+ +   DG Y +SG K F+S   +D       ++LA++         +  FLVP+ L D
Sbjct: 177 SKAEDNGDGTYAVSGQKIFISWGDNDFTENVCHLVLARLPDGVPGTKGISLFLVPKYLPD 236

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N L    L++K+G   + T  +++    G+L+G  +     +  M     L 
Sbjct: 237 ENGNPGKANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLG 296

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATAL 372
                V     +   A+ YA  R             ++D   ++R + ++  D+ A+ A+
Sbjct: 297 VGGQGVGAAEGAYQHALSYALDRKQGKTPVEGGTGTIVDHADVRRMLMEMKADVYASRAI 356

Query: 373 SFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               A + D   +   +E    A  + PI K +  +    V  + ++  GG G+IEE   
Sbjct: 357 MLACAGAIDMGTATGDAEWKTRAAFLTPIAKAFGTETGIRVSEQGVQVHGGMGFIEETGA 416

Query: 431 ARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           A+ YR+    +I  G+     +D V   +  G  +  +L   +E+    +      +   
Sbjct: 417 AQFYRDVRVTAIYEGTNGIQAMDLVARKMMDGGEMAHRLIDEIEEQAERARPTHPNMAEA 476

Query: 490 SISLCKEDKGLARFLTE 506
               C+  +    +L E
Sbjct: 477 VWQACETLREATEWLVE 493


>gi|187478253|ref|YP_786277.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115422839|emb|CAJ49367.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 384

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 74/407 (18%), Positives = 138/407 (33%), Gaps = 30/407 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +  L+   +  A+ A +Y   +L  +     RWD     P       R+   G       
Sbjct: 2   DLELTEEQRAFAQAARDYAQGELAPH---AARWDAQGIFP--REAFARAGELGFCAIYAS 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +   +   +                    ++    +  M+    +  V  +W  ++ S 
Sbjct: 57  EAIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMIGQWGSANVQAEWGGQLASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D  ++ ++ ++  D         +      +D
Sbjct: 117 E-------------KLASYCLTEPNAGSDAGSLVTRAERDGDDFLISGAKAFISGGGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             I++A+  G  G   V         +G+ Y R + K+G  S +T  + F N        
Sbjct: 164 LLIVMART-GGPGPAGVSAFAVPAHASGISYGRKEEKMGWNSQSTRPISFENVRVPADSM 222

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++    SV   + +L  A  Y   R      L +   ++  
Sbjct: 223 LGSEGEGFKIAMKGLDGGRINIGTCSVGAAQGALDAARRYMHERRQFNRRLAEFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  +    A   D           A     + K +       +  +A + 
Sbjct: 283 LADMATHLVAARQMVRLAACKLDGGSPD------AGTYCAMAKRFATDTGFQICLDAQQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
            GG GY+ +  + R  R++  + IL G+   M + V   LL+KG ++
Sbjct: 337 HGGYGYLRDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLDKGADI 383


>gi|32469593|sp|Q8JZN5|ACAD9_MOUSE RecName: Full=Acyl-CoA dehydrogenase family member 9,
           mitochondrial; Short=ACAD-9; Flags: Precursor
 gi|21410394|gb|AAH31137.1| Acad9 protein [Mus musculus]
 gi|21595209|gb|AAH32213.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Mus musculus]
 gi|23958795|gb|AAH33277.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Mus musculus]
          Length = 625

 Score =  256 bits (653), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 84/483 (17%), Positives = 166/483 (34%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNDEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              I  G+   + L +    L   G  L  ++      ++ +  + +   LRDS+    +
Sbjct: 425 ILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVD 484

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                       +L  SA                 L R G N + +  +  R  +   + 
Sbjct: 485 LGLTGDLGVVHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANILINL 544

Query: 542 HCM 544
           + M
Sbjct: 545 YGM 547


>gi|228942175|ref|ZP_04104715.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975104|ref|ZP_04135663.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981744|ref|ZP_04142039.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           Bt407]
 gi|228777856|gb|EEM26128.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           Bt407]
 gi|228784625|gb|EEM32645.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817509|gb|EEM63594.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 600

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|268534228|ref|XP_002632245.1| Hypothetical protein CBG07125 [Caenorhabditis briggsae]
 gi|187033605|emb|CAP27240.1| hypothetical protein CBG_07125 [Caenorhabditis briggsae AF16]
          Length = 409

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 131/371 (35%), Gaps = 27/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK    P    +L+++   G                + H         M  +     +
Sbjct: 52  EWDKKGELPM--DVLKKAGEMGFGAIYCKGDHGGSGLSRLHSSVIFEQLSMGCVSTAAYI 109

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S     A M+      ++ +D  P+             M   +      LTE   G+D A
Sbjct: 110 SIHNMCAWMLDTYGPDKLKEDLLPE-------------MALFNKLGSYCLTEPDAGSDAA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
           +I +   K  D  Y ++G K F+S    S+ + ++ + +G   G   +  L+ +    G 
Sbjct: 157 SIRTTATKKGD-YYVVNGSKAFISGAGTSNNYFVMMRQDGAAPGAKGIFCLMIEDGTEGF 215

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSG 327
            Y + ++K+G  S  T  L F +    +   +                  ++ A  S+  
Sbjct: 216 SYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRVNIASCSLGA 275

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + S+  AI + + R   G  L D    +  +A++A  +  +  +    A   D      
Sbjct: 276 AQRSMDLAIEHLKCRKQFGKTLSDFQYNQFKLAELATKLVTSRLIVRAAAEQLDNDDPEK 335

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                   +  + K         V+  A++  GG G++++  I ++ R+   + IL G+ 
Sbjct: 336 VA------LCAMAKLHATDNCFEVVNGALQMFGGYGFLKDYPIQQYLRDIRVHQILEGTN 389

Query: 448 NAMVLDVLNLL 458
             M L +   L
Sbjct: 390 EMMRLLISRDL 400


>gi|126642320|ref|YP_001085304.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii ATCC 17978]
          Length = 363

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 134/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P   ++  +   +G  C      +        + +        A
Sbjct: 3   EHIAPHYDHWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 60

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 61  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 107

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 108 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 166

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 167 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 226

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 227 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 286

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V  + ++  GG GY+ E  I+R + ++ 
Sbjct: 287 LYQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDAR 339

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 340 IQRIYGGTNEIMKEIVARGL 359


>gi|39934070|ref|NP_946346.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39647918|emb|CAE26438.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 381

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/416 (19%), Positives = 147/416 (35%), Gaps = 49/416 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + +EL+   +      A++LA                  R  K+    AW  L     
Sbjct: 6   PWMTEELDTFRDQFRKFLAKDLAP----------HSDTW--RKQKMVDRSAWLKL----G 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTP 168
             G         +  +    A+   AA    M ++    L   +V+S   A  +    + 
Sbjct: 50  EMGALLPSVPEEYGGLGASFAY--DAAVYEDMEKIVPDALSGVTVSSGIVAHYILNYGSE 107

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P +   E             +   + +TE   G+D+ ++ +  +   D  Y +
Sbjct: 108 EQKRRWLPGMARGE-------------LIGAIAMTEPGTGSDLQSVRTTAKLDGDD-YVI 153

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++    D  I++A+  G  G   +  ++ E     G    R  +KIG  ++ T
Sbjct: 154 NGQKTFITNGQNCDLIIVVART-GGAGAKGLSLIVLETKDNPGFKRGRNLDKIGLHASDT 212

Query: 287 VELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F N        L      G V+ M+ L    L  AI +V+ M  ++A    Y R R
Sbjct: 213 SELFFENARTPKENLLGGEEGKGFVQLMQQLPQERLIIAIGAVAAMERAVALTSEYTRER 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +I+       +A+   +   A                         + A + K+
Sbjct: 273 KAFGQPIIEFQNTAFTLAERKTEAFIARVFVDYCLVQLVAGN-------LDAVTASMAKW 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +     + E ++  GG GY++E  I R + +S    I  G+   M L +   L
Sbjct: 326 WTTQKQVETVDECLQLHGGYGYMQEYPIGRMFIDSRIQKIYGGTNEVMKLLIARSL 381


>gi|146280706|ref|YP_001170859.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145568911|gb|ABP78017.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 596

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/557 (16%), Positives = 179/557 (32%), Gaps = 74/557 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHC 117
           L   ++    +E AR        L+      G   +  +V     +    ++ + +G   
Sbjct: 31  LDRELIDGVLEEAARYTGGEIAPLNRNSDEEGVTLENGEVRTPQGFVEAYKQYVDNGWAS 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +      Q        + + A L        +  +   +    +  +   +  K
Sbjct: 91  MTGPTEYGGQGFPQLVACNFHEMLMGASLSFRIYSGLTEGAVLALYKHGSDELKNAYLEK 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S  +  T             + LTE + GTD+A + ++ +  +DG Y +SG K F+S 
Sbjct: 151 LVSGRWSGT-------------MCLTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISG 197

Query: 238 PMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGN 281
              D       ++LA+  +   G   +  LL            G+ N L    +++K+G 
Sbjct: 198 GEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADGTPGARNALSCGAIEHKMGI 257

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +  AT  + F    G+++G+ N     +  M         +  +     +   ++ YAR 
Sbjct: 258 KGAATCVMNFDGATGWIVGEPNQGLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARE 317

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388
           R  S G             +I  P ++R +      +  +  L+   A   D      E 
Sbjct: 318 RLQSRGLAGAQRPDKPADPIIVHPDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEP 377

Query: 389 -----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 +  A ++ PI K +   M   V +  ++  GG GYI E  + +  R+S    + 
Sbjct: 378 SYRKAASKRAALLIPIVKAFFTDMGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLY 437

Query: 444 LGSGNAMVLDVLNLLEKGTN----------------------LFEQLFSTLEQDLGSSGK 481
            G+     LD +     G                            L S ++  LG   +
Sbjct: 438 EGTNGIQALDYIRRKLLGDGGAELSALQAEFSEICDRQSDRPALHALASKVQMRLGEWRE 497

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
               I+  +    +E   ++    +  A    A    +A      D  LE    +     
Sbjct: 498 LTAEIIAATGRDPQEIGAVSVDFLQYSAYVLLAGLWLQAAARA-QDA-LEQGAGEEAFYQ 555

Query: 542 HCMLHGRFNAAHIIDSL 558
             +    F    ++   
Sbjct: 556 AKLASADFYLRRVLPRA 572


>gi|326942825|gb|AEA18721.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 594

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D F++ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|291522057|emb|CBK80350.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7]
          Length = 381

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 132/362 (36%), Gaps = 28/362 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+ +    G         +      +  K      +         ++S    S+ ++   
Sbjct: 41  LIEQMAELGFMGINVPEEYGGAGLDEVTKALVIEEFAKVDASVAEMLSVHTLSSDIILRN 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    K +  K                        LTE   G+D AA  ++     D  
Sbjct: 101 GTEEQKKKYLAKACQG--------------CVGAFALTEPNAGSDAAAAKTKAIADGDD- 145

Query: 226 YCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           Y ++G K F+S+      D  I++A  E       +  ++ D    G    + ++K+G R
Sbjct: 146 YVINGSKCFISNMGPDEGDYVILIALTEPEKKTKGMSAIIVDRDTPGFTVPKAEDKMGLR 205

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +    EL F++       LLG                 +  A  +V     +L  A+ Y+
Sbjct: 206 AAPVSELVFTDCRVPKTQLLGQEGKGFAIAMAGLDGGRIGMAAQAVGVAEGALDAAVDYS 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +     ++  +AD+A    AA AL+   A      KS ++EAA A      
Sbjct: 266 TQRIQFGKPINANQGIQWYLADMATQTEAAKALTLNAAALRQAGKSVNKEAAMA------ 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            KY+  + A  V  ++++  GG GY+++ +I R YR++    +  G+     + +   + 
Sbjct: 320 -KYFASENAVKVAYQSLQIHGGYGYMKDYAIERMYRDARIIPLYEGTSEIQKVVISRAVI 378

Query: 460 KG 461
            G
Sbjct: 379 TG 380


>gi|218196010|gb|EEC78437.1| hypothetical protein OsI_18277 [Oryza sativa Indica Group]
          Length = 357

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 117/341 (34%), Gaps = 24/341 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P     D     P    L +      LH       +  +      H I    +   
Sbjct: 34  ETIAPHAAAIDASNHFPKDVNLWKLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEISRA 93

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    +P     + PK+ S E+                L ++
Sbjct: 94  SGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEH-------------VGALAMS 140

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +K+  G        W  + P +   ++ A+ +   G   +   + 
Sbjct: 141 EPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGITAFII 200

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDS 320
           +    G    +  +K+G R + T EL F N F      L      V  M     L  L  
Sbjct: 201 EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLERLVL 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+V L  A+ Y R+R   G  + +   ++  +AD+   + ++ +  + +A   
Sbjct: 261 AAGPIGLMQVCLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVYSVARDC 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           D  K   ++             +  + A  V  +A++C+GG
Sbjct: 321 DNGKVDRKD-------CAGVILFAAERATQVALQAIQCLGG 354


>gi|114765989|ref|ZP_01445001.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114541707|gb|EAU44746.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 380

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 137/371 (36%), Gaps = 26/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+ +  P   A+       GL           V                     G+  +
Sbjct: 31  IDRDDVFP--RAIYEALAEQGLFGVALREEAGGVGLDAMAACIVMEEIARGSGAVGNAFA 88

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             V +A  +    +   HK   P I              +  V     +TE   G+D+AA
Sbjct: 89  IPVEAALFLDHHGS-DQHKALIPGIL-------------EGKVIPATAVTEPDHGSDVAA 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +T+  ++  D         W     ++D  ++ A+ +   G   +  +L +    G+   
Sbjct: 135 MTTTARREGDEYVIKGTKAWVTFGQVADVIMVFAKTDPEAGHRGISCILVETDRAGVSRG 194

Query: 274 RLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           + +  +G    A   + F +     G L+G  + +     +      L  + M++   + 
Sbjct: 195 KSEELLGMHGLAECMVSFDDVRVPVGNLIGPEHGAFKMAMENFNFSRLMMSSMALGMAQA 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++ +AI YA  R   G  + +   ++  IAD+A DI+AA  L    A  +D  +  + EA
Sbjct: 255 AMEDAIAYANDRKQFGKPIFEHQAVQFMIADMAKDISAARLLIHNAAKLYDAGQPIALEA 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +   MA   I+ A++  GG+GY  E  + R +R+   + I  G+    
Sbjct: 315 AQA-------KLFTTDMAQGHISNALQIHGGNGYSREFRVERLFRDVRLSQIYEGTNQIQ 367

Query: 451 VLDVLNLLEKG 461
            + +   ++K 
Sbjct: 368 RMIIARQVQKA 378


>gi|317407384|gb|EFV87348.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 589

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 99/545 (18%), Positives = 193/545 (35%), Gaps = 74/545 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           + L       P      LE    +        L   A+              R   V   
Sbjct: 24  AALPQFAEATPDTAQAVLEEAATFAA-DVLAPLNHPADREP------SAW--RDGAVTTS 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +    R+    G         +             + +   A L        +  +  
Sbjct: 75  PGFKQAFRQYAEAGWQGMTHPAEYGGQGLPGLLGAPCSEMLNAANLSFALCPLLTNGAVE 134

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +P + + +   + S ++  T             + LTE + G+D+A + S+ Q 
Sbjct: 135 ALLTAGSPELRERFIGPMLSGQWTGT-------------MNLTEPQAGSDLALLRSRAQP 181

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED----- 264
           + DG Y +SG K F++    D       ++LA++         +  FLVP+ L +     
Sbjct: 182 VGDGTYRISGTKIFITYGEHDLAENIIHLVLARLPDAPEGVKGISLFLVPKFLVNDDGSL 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    +++K+G +++ T  L+F +     G+L+G  N     +  M         
Sbjct: 242 GARNDVTCVSIEHKLGIKASPTATLQFGDAGGAIGYLVGQENRGLDAMFIMMNAARFAVG 301

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATAL 372
           +  ++    +   A+ YA  R  S            +I  P ++R +  +     A  AL
Sbjct: 302 VQGIAVADRAYQHALAYAAERVQSRPVDGSSRDAVPIIQHPDVRRMLGTMRALTEAGRAL 361

Query: 373 SFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           ++  A   D A + ++ AA AR +A      PI K WC + +  V +  ++  GG G+IE
Sbjct: 362 AYYTAGHADLAHASADPAARARHLAVQEFLVPIVKGWCTEASIDVASLGVQVHGGMGFIE 421

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           E   A++YR++   +I  G+       L     L  G  + + L   + +   +   +  
Sbjct: 422 ETGAAQYYRDARILTIYEGTTAIQANDLVGRKTLRDGGAVAQALIEEIRKTEEALQARSE 481

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              R  ++  ++          ++ALA++   +          VF            + +
Sbjct: 482 PAARLVLTPLRQ---------GRLALANTVDFVVANAAAHPNAVF-------GSGVPYLL 525

Query: 545 LHGRF 549
           L G  
Sbjct: 526 LAGTV 530


>gi|313110252|ref|ZP_07796148.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310882650|gb|EFQ41244.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 596

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 169/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +    L   + 
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLIRRKLLGDQGGELLALQGELAVASEALQGRAALAPLVE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|149728394|ref|XP_001489295.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 9 [Equus
           caballus]
          Length = 621

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/481 (17%), Positives = 169/481 (35%), Gaps = 50/481 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ++ D+    P  H  L +    GL        +  +        R   +  +    A  L
Sbjct: 85  QKIDREGKIP--HETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLGEIISLDASIAVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGSEAQKAKYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCF-LVPRLLEDG 265
           A+I ++     D   Y L+G K W  +   ++ F + A+    +        +   + + 
Sbjct: 190 ASIQTRATLSEDKKHYVLNGSKVWITNGARANIFTVFAKTSIVDSDNSVKDKITAFIVER 249

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              G+   + ++K+G R + T E+ F NT   +   L    G  +    +  L+S   S+
Sbjct: 250 DFGGVTNGKPEDKLGIRGSDTCEVHFENTRVPVENVLGEVGGGFKVAMNI--LNSGRFSM 307

Query: 326 SGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                      +     YA  R      L +  +++   A +A       ++++  A   
Sbjct: 308 GSAVAGMLKKLIEMTTEYACMRKQFNRSLSEFGLIQEKFALMAQKAYVMESMAYLTAGML 367

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+            I A + K +  + A   ++EA++  GGSGY+++  + R  R++   
Sbjct: 368 DQPGFPD-----CSIEAAMVKVFSSEGAWQCVSEALQVFGGSGYVKDCPLERILRDARIL 422

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDK 498
            I  G+   + + + L  L+    +     + L++ ++ +  + V   LRDS+    +  
Sbjct: 423 LIFEGTNEILRMYIALTGLQHAGRILTARINELKRGNVTTIMETVGQRLRDSLGRTVDLG 482

Query: 499 GLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTHC 543
              +       +A SA                 L R G   + +  +  R  +   + + 
Sbjct: 483 LTGKLGAVHPTVADSANKLEENVYYFGRTVETLLLRFGKTIVEEQMVLKRVANILINLYG 542

Query: 544 M 544
           M
Sbjct: 543 M 543


>gi|94310754|ref|YP_583964.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354606|gb|ABF08695.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 429

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 125/366 (34%), Gaps = 26/366 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSV 156
           E       L+      G+        +          + AA       +     + + + 
Sbjct: 75  EHDEVAQDLVDAMAAQGMFGYSIPEQYGGAGMTTEELVLAAMELSQCSVAFRARVGTNTG 134

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  +    TP   + + P + S               +     LTE   G+D  A+ +
Sbjct: 135 IGSEALVADGTPAQKQHYLPLLASG-------------QLTGSFALTEPEAGSDATALQT 181

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRL 275
              +  D         +  ++P++  F ++A+ +   +G   +   +      GL   R 
Sbjct: 182 TAVRDGDAYILNGTKCFITNAPIAGLFTVMARTDPANLGAGGISAFIVPRETPGLSTGRP 241

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVS 331
             K+G   +   E+ F N     +  +      G    MK+L    +  A +        
Sbjct: 242 YQKMGQAGSPVSEVHFDNCRVPAVNLIGGEEGKGFRTAMKVLNKQRIHLAALCTGPAIRM 301

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ +   R   G +L D  +++  IAD   DI AA AL    A   D  +  +    
Sbjct: 302 LEDAVRFVTERKQFGQVLADFQLVQAMIADCQTDIHAARALILETARKRDLGEDVT---- 357

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              + A I KY+  +M   V    ++  GG GYI +  I R YR+     +  G+     
Sbjct: 358 ---MQASICKYFASEMCGRVADRCVQLFGGYGYIADYGIERFYRDVRLFRLYEGTSQIHQ 414

Query: 452 LDVLNL 457
           +++   
Sbjct: 415 INIAKR 420


>gi|119718512|ref|YP_925477.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539173|gb|ABL83790.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 383

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 131/352 (37%), Gaps = 33/352 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHK 172
           G         +  +                A      ++S S+     ++    T     
Sbjct: 49  GFFGLTIPEEYGGLGGDYITYCIGMEELGRADSSVRGIVSVSMGLVGKVILSHGTEEQKH 108

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P I +                    GLTE   G+D A + ++  +  D  + L+G K
Sbjct: 109 RWLPGIATG-------------RTLACFGLTEPDNGSDAANLRTRAVRDGDD-WVLNGAK 154

Query: 233 WFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+++   +D  ++ A+  G  G   V   L      G   Q +  K+G R  AT EL F
Sbjct: 155 IFITNGTWADVCLVFART-GEPGPRGVSAFLVPTDLPGFGRQEIHGKLGLRGQATAELSF 213

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVS 345
            N        L       E  KI ++ LD   +SV    V + +        Y+ +R   
Sbjct: 214 DNVRVPADAMLG---AEGEGFKIAMHSLDKGRVSVGAGCVGIIQGCLEAVVDYSVQRRQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    +++  IA+I+++  AA  L +R A+  +  +    EA+ A       KY+  
Sbjct: 271 GRQLASFQLIQDMIAEISVEADAARLLVWRAADLIERDQPFGTEASKA-------KYFAS 323

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           + A      A++  GG GY++E  + ++ R++   ++  G+     L +   
Sbjct: 324 EAAVRAANLAIQAFGGYGYVDEYPVQKYMRDARVMTLYEGTSQIQKLLIGRA 375


>gi|313219987|emb|CBY30852.1| unnamed protein product [Oikopleura dioica]
          Length = 408

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 126/374 (33%), Gaps = 25/374 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                  DK +  P     +R     G+        F            AA         
Sbjct: 48  DSHAFEIDKNDHFPQLREYIRNCGKMGILGLTVPEKFGGTDLGYFSIALAAEENARVNAG 107

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A    + S    + +    +    +   P   +               +  GL +TE  
Sbjct: 108 IAMTTGACSNLFINQIVRNGSEEQKETLLPDHVAG-------------KLMGGLAMTELN 154

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDG 265
            G+D+ ++ +   K  D         W  + P++D  ++ A+          +   + D 
Sbjct: 155 AGSDVMSMKTNAVKKGDFYVINGNKFWITNGPVADHIVLYAKTNPSSNDGRSITAFIIDT 214

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G   Q +  K+G R + T +L F N       +L         +     +  + +A 
Sbjct: 215 KTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAVLMSGLNIERILAAA 274

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V   + ++  A  YA  R      + +  +++  +AD+   ++A  +  + +A   D+
Sbjct: 275 IPVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLSACRSYLYNVARHADK 334

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + + A           +C + A  +  +A++ +GG+G+I +    R+ R++    I
Sbjct: 335 NEPTNHDCAGL-------VLYCAEKATQICLDAIQILGGNGFINDYPTGRYLRDAKLWEI 387

Query: 443 LLGSGNAMVLDVLN 456
             G+     + V  
Sbjct: 388 GAGTSEVRRVIVGR 401


>gi|300119669|ref|ZP_07057211.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
 gi|298722964|gb|EFI63864.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1]
          Length = 594

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|224371916|ref|YP_002606082.1| Acd16 [Desulfobacterium autotrophicum HRM2]
 gi|223694635|gb|ACN17918.1| Acd16 [Desulfobacterium autotrophicum HRM2]
          Length = 376

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 18/286 (6%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSP 238
           + E        M +        LTE   G+D   + +   +  D  + L+G K F  +  
Sbjct: 97  TNEQKQRFIPAMAQGESIGAFCLTEANAGSDAGGVETHAVET-DQGFLLNGTKIFVTNGG 155

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +    ++ A  +           + +    G     +++  G R+N    +   +    L
Sbjct: 156 VCGTLLVFAVTQEEDKPLQANVFVVEKDRPGFMVGEIEDLCGMRANPVSSIFLEDC---L 212

Query: 299 LGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQ 352
           +   N+   P + MKI L  LD+  + ++   + +A+A       YA+ R      L   
Sbjct: 213 IPKNNLLGRPGQGMKIGLTALDTGRIGIAAQALGIAQAAFESAVSYAKERQQFNKPLSKF 272

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +A++   I A+  L +R A + D  KS S EA+ A       K +C   A  V 
Sbjct: 273 QTIQNYLAEMNTKIDASRLLLYRAAAAKDSKKSFSAEASMA-------KLYCSATAKEVT 325

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             A++  GG GY +E  + R++R++    I  G+     + +   +
Sbjct: 326 DLAVQIHGGYGYSKEYDVERYFRDAKVTEIYEGTSEIQKMVIARAI 371


>gi|222085222|ref|YP_002543752.1| isovaleryl-CoA dehydrogenase protein [Agrobacterium radiobacter
           K84]
 gi|221722670|gb|ACM25826.1| isovaleryl-CoA dehydrogenase protein [Agrobacterium radiobacter
           K84]
          Length = 387

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 139/399 (34%), Gaps = 28/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L    + L         Q     P  +  D+    P    L R   + GL     D +
Sbjct: 8   FALGDEIEALRDSVRRFAGQ--RIAPLADEIDRNNGFPM--QLWREMGNLGLLGVTADEA 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +        AH +    +   +        + S    + +    +      + PK+ S E
Sbjct: 64  YGGAGLGYLAHTVAMEEISRASASVGLSYGAHSNLCVNQINRNGSEAQKARYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++    +K  D         W  + P ++ 
Sbjct: 124 H-------------VGALAMSEPNSGSDVVSMKLHAEKRGDRYILNGSKMWITNGPDAEV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+     G   +   L +    G    +  +K+G R + T EL F +        L
Sbjct: 171 LVVYAKTTPDAGPRGITAFLVEKGFKGFSVGQKLDKLGMRGSNTSELIFIDCEVPAENVL 230

Query: 303 NVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               G    +   +  +  ++S   V  M   +   + Y   R   G  + +  +M+  +
Sbjct: 231 GQVDGGARVLMSGLDYERVVLSGGPVGIMAACMDVVLPYLHERKQFGQPIGEFQLMQGKL 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + + AA A  + +A + D  ++  ++AA           +  + A A+  E ++ +
Sbjct: 291 ADMYVTMNAARAYVYAVAAACDRGETTRKDAAG-------CILYAAEKATALALECIQAL 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 344 GGNGYTNDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|15805946|ref|NP_294646.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6458645|gb|AAF10499.1|AE001945_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 381

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 136/380 (35%), Gaps = 24/380 (6%)

Query: 86  AYGPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
                 +R  ++E   +    L++ +   GL        +  V    +   R A    M 
Sbjct: 20  MLTRVEDRAQEIEHTNSVPPELIKEAADLGLFGLSIPEEYGGVGL--SSLGRCAVYEAMG 77

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q   G     S  ++          +      K+ + E        M       G  +TE
Sbjct: 78  QGHMGFGGMISAHAS----------IGTSGLVKLGNEEQKQRFLPRMAAGECIAGFAITE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D   I ++  K  D         +  ++P++    ++A  +   G   +   L +
Sbjct: 128 PSSGSDAGNIRTKAVKKGDVYVLNGTKHYISNAPIAGLLTVIAITDPAQGSRGMSAFLVE 187

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
             S  G+   ++  K+G +   + E+ F +       LLG  N        +     +  
Sbjct: 188 PQSTPGVSIGKIDEKMGQKGALSAEVIFEDAEIPAANLLGPENRGYREALGILTNGRVGI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S   M+  L  ++ +A+ R   G  + +   ++  +A++ + I  +  L  ++A   
Sbjct: 248 AARSTGAMQRLLDLSVAHAQTREQFGKPIAEFQAVQFMLAEMEVAIQTSRVLWQKVAWMV 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +         + MA + KY   +M   V  +A++  GG GY+++    R YR+    
Sbjct: 308 DQGQD-------VKRMASVAKYHATEMLSQVADKAVQVAGGMGYVKDAPFERFYRDQRLL 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L +
Sbjct: 361 RIYEGTSEIQKVIIAAELLR 380


>gi|229062672|ref|ZP_04199981.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH603]
 gi|229169725|ref|ZP_04297425.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH621]
 gi|228613764|gb|EEK70889.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH621]
 gi|228716642|gb|EEL68339.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH603]
          Length = 608

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|291294664|ref|YP_003506062.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290469623|gb|ADD27042.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 394

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 145/379 (38%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P     D+    P    ++++    G+  +     +           R            
Sbjct: 34  PTAAERDETGAFP--FEIVKKLGEMGVMGAQVPEQYGGAGLSTRVFARIIEEIAAVDGSL 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +      + +    +  + + P++ S E             V    GLTE   
Sbjct: 92  ALTVASHNSLCTGHILIAGNEQQKRQFLPRLASAE-------------VLGAWGLTEPGS 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLL 262
           G+D AA+ ++ +      + L+G K F++   ++  +++ A+ +           +  L+
Sbjct: 139 GSDAAAMRTKAEDTG-SSWVLNGTKQFITQGSVAGVYVVNARTDAAPSEEKKHLGLSALV 197

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLD 319
            +    GL   R + K+G  ++ T ++ F +        L     G  + M++L    + 
Sbjct: 198 FEAPIPGLRIGRKERKLGLNASDTAQIIFEDITLPKEALLGERGRGFYDVMRVLEGGRIG 257

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A M+V   R +L  A  YA  R   G  + +   +   +AD+A  + AA  L  + A  
Sbjct: 258 IAAMAVGLGRAALEFATKYALEREQFGRPIAEFQAVSHKLADMATQLEAARLLYLKAAEL 317

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K     AA A       K +  ++A     EA++ +GG GYI+E  + R++R++  
Sbjct: 318 RDAGKPFGPAAAQA-------KLFASEVAVQACDEAIQILGGYGYIKEYPVERYWRDARL 370

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   + + +   L
Sbjct: 371 TRIGEGTSEVLKVIIAKHL 389


>gi|229163979|ref|ZP_04291918.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus R309803]
 gi|228619481|gb|EEK76368.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus R309803]
          Length = 600

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|219113303|ref|XP_002186235.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum
           tricornutum CCAP 1055/1]
 gi|209583085|gb|ACI65705.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum
           tricornutum CCAP 1055/1]
          Length = 436

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 135/379 (35%), Gaps = 25/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     + +    GL        F+           A           
Sbjct: 70  PHAGEWDEKHMFP--KDAVTQLAELGLMGINTPEEFQGSGLDAMSYAIAMEEISRGCASV 127

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +     V    T    ++WA      +     K            GL+E   
Sbjct: 128 GVIMSAHNSLYLYPVQTFGTDAQKEEWAAPYAVCDDGSGGKL------NIGCFGLSEPGN 181

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +      D         W  ++  S A I+ A  +  +    +   +     
Sbjct: 182 GSDAGAAATTATLDGDEWVVNGTKAWITNAHESGAAIVFATTDKSLKHKGISAFIVPMDA 241

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G      ++K+G R+++T  L   N     +   N+   P    KI +  LD   + V+
Sbjct: 242 PGFSLGAKEDKLGIRASSTSNLIMDNVR---IPKDNLLGEPGMGFKIAMQTLDGGRIGVA 298

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A      A+ YA  RH  G  + +   ++  I+ + +   +A  L++R A   D
Sbjct: 299 GQALGIASASIDCAVKYALERHAFGKPISELQSIQNKISAMTVARDSARLLTWRAAQLKD 358

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  + EAA A++ A      C         +A++ +GG+GY+ +    RHYR++    
Sbjct: 359 NGERFTREAAMAKLAASEAATMCS-------HQAIQILGGAGYVRDFPAERHYRDARITE 411

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L + N + K
Sbjct: 412 IYEGTSEIQHLVIANDVLK 430


>gi|167644246|ref|YP_001681909.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346676|gb|ABZ69411.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 382

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 111/306 (36%), Gaps = 24/306 (7%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +  T      W P I S E             +     LTE   G+D AA+ ++  + 
Sbjct: 97  LVMFGTDEQKARWLPGIASGE-------------IVTSFALTEAEAGSDSAAVQTRATRD 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D        ++  ++  +  F ++A+   G  G   V   L      GL   + + K+G
Sbjct: 144 GDDYVLNGSKRYITNAGKASLFTVMARTNPGAKGGSGVSAFLVPRDLPGLTVGKPEKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +     ++ F N        L     G    M++L    L  A + V      L + + 
Sbjct: 204 QQGAHIHDVTFDNVRVPAWNRLGAEGEGFKVAMQVLDRGRLHIAAVCVGVAERLLVDCVA 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +    +++  IAD   +  AA AL    A   D  +  + EAA A    
Sbjct: 264 YASERKQFGQPIASFQLIQAMIADSKTEALAARALVLETARKRDAGEGVTLEAAAA---- 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V   A++  GG+GY+ +  I R YR+     I  G+     L +   
Sbjct: 320 ---KLFASEMVGRVADRAVQIFGGAGYVADYGIERLYRDVRIFRIYEGTSQIQQLVIARE 376

Query: 458 LEKGTN 463
             K   
Sbjct: 377 TLKRGG 382


>gi|126727131|ref|ZP_01742968.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126703559|gb|EBA02655.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 387

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 143/397 (36%), Gaps = 31/397 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P   + D+    PA   L R     GL        F  
Sbjct: 9   DLGEDVNAMRDMVHRFAQDRIKPIAAKTDQDNIFPAH--LWREMGELGLLGVTVPEEFGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH I    +   +   +    + S    + + L  T      + P + S E   
Sbjct: 67  AGMSYLAHTIVVEEIARASASVSLSYGAHSNLCVNQIRLNGTDEQRAKYLPGLLSGEN-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++T + +K +          W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMTLRAEKRNGYYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   + + +  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPDAGAKGMTAFIVEKTMTGFSTSPHFDKVGMRGSNTAELIFEDVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   + E + Y   R   G  + +  +M+  +AD+
Sbjct: 234 GRGVNVLMSGLDYERVVLAGIGTGIMAACMDEVMPYMVERKQFGQPIGNFQLMQGKVADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D  K   ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVARACDRGKVTRQDAA-------ACVLYASEQAMVQAHQAVQALGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GY+ + +++R +R++    I  G+     + +   L 
Sbjct: 347 GYLADSTVSRLFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|118465257|ref|YP_881753.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118166544|gb|ABK67441.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 380

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 129/354 (36%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   GL    +D  +  + V+        +    +       L   +      +  +TT 
Sbjct: 46  AGEHGLIGWEFDEKYGGLGVKDFRFNQIVSEEMFLTGSVGIGLGVQNDILVPYLNDLTTE 105

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK  S EY                + ++E   G+D+A I +  +   D     
Sbjct: 106 EQKERWLPKFVSGEY-------------IGSIAMSEPAAGSDLAGIKTTARDEGDHWVV- 151

Query: 229 SGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+S+ +    ++ A + +       +  L+ +    G    R  +KIG  S  T 
Sbjct: 152 NGQKTFISNGLLSKLVLTAVKTDPSARHKGISLLMIEDGMEGFTRGRKLDKIGQYSADTA 211

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F +       L+G+LN     +        +  A  ++   R +L     YA  R  
Sbjct: 212 ELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACYALPAARRALDLTKTYASERTA 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    V +  +A++   + AA     +   S ++     ++AA  +        W 
Sbjct: 272 FGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDAAGLKW-------WT 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M   +   +
Sbjct: 325 SEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIMKDLMGRAM 378


>gi|75760335|ref|ZP_00740383.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903506|ref|ZP_04067630.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           4222]
 gi|228910842|ref|ZP_04074651.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           200]
 gi|229076384|ref|ZP_04209349.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-18]
 gi|229099462|ref|ZP_04230391.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-29]
 gi|229118476|ref|ZP_04247830.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-3]
 gi|229175701|ref|ZP_04303209.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus MM3]
 gi|74492189|gb|EAO55357.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228607842|gb|EEK65156.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus MM3]
 gi|228665046|gb|EEL20534.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock1-3]
 gi|228683958|gb|EEL37907.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-29]
 gi|228706819|gb|EEL59027.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock4-18]
 gi|228848793|gb|EEM93638.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           200]
 gi|228856127|gb|EEN00663.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis IBL
           4222]
          Length = 600

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 53  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 104

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 105 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 151

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 152 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 209

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 210 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 267

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 268 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 327

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 328 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 387

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 388 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 447

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 448 MMMMPEEVGDEPLALQKYL 466


>gi|294146601|ref|YP_003559267.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292677018|dbj|BAI98535.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 577

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/591 (17%), Positives = 196/591 (33%), Gaps = 87/591 (14%)

Query: 28  PPLFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
            P         ++ L     +A     V  +L            +E  RM      +LH 
Sbjct: 5   VPPIDDYRFLLTEVLGFDRAMAEMGKEVDADLAA-------AVLEEAGRMC---ADRLHP 54

Query: 87  YGPGGER-----WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
               G+       D +   P   A   R     G      D ++         ++    +
Sbjct: 55  LNRHGDEEGSRLVDGLVKTPEGFADAWRDFAAAGWASLSADPAYGGQGLPFILQLWLDEM 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                L  G     +  +   +    +  +   + P + S E+                +
Sbjct: 115 LAATNLSFGLFPGLTRGACEAIMAHASDFLKATYLPPMVSGEW-------------TGAM 161

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
            LTE   GTD+A + ++    +DG Y ++G K F+SS   D       ++LA++      
Sbjct: 162 ALTESGAGTDLALLKTKAAPDADGSYAITGQKIFISSGDHDFGGNIVHLVLARLPDAPAG 221

Query: 252 --RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              +  FLVP+ L D        N +    L+ K+G  +  T  + +    G+L+G+ + 
Sbjct: 222 VKGISLFLVPKYLPDADGGFTIRNSMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEPHK 281

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMK 356
               +  M     L   I  +     S  +A  YA+ R              +I+   ++
Sbjct: 282 GLAAMFTMMNAERLMVGIQGLGIAGASYQQAAGYAKERLQGRSADGARGPVTIIEHADVR 341

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPA 410
           R + +I   + A  AL+   A   D A    + A          ++ P+ K         
Sbjct: 342 RMLLNIRAFVEAGRALAGWTALQLDRAHHHPDAAERARADALVALLTPVVKAAFTDFGFE 401

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
              +A +  GG GYI E  + ++ R++    I  G+     +D++   L   G  + E  
Sbjct: 402 SAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMAGGAVVEGF 461

Query: 469 FSTLEQDLGSS-GKKVITILRDSISLCKEDKGLAR------------------------F 503
           F+ +E DL ++ G  +    R++++L +      R                        +
Sbjct: 462 FALVEMDLAAAEGLNIAAKTREALALLRGVTASLRGAGTEAAGAAAVDYLRLFALVSMGW 521

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554
           +  ++A A+   A        +AD F +            +  G      +
Sbjct: 522 MWTRMAAAAQGDAPLHGAKRAVADYFAQRMLPQAQGLAVGIAAGEATIMAL 572


>gi|296478490|gb|DAA20605.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
          Length = 412

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 138/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +R+    GL                     A           
Sbjct: 55  PIAAQVDKEHRFPA--AQVRKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   T    + W              AP           L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGTKEQKQRWV-------------APFTSGDKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL   + ++K+G R+++T  L F +        L     G    M+ L    +  A  +
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQA 279

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  A+ YA  R   G  L     ++  +AD+AL + +A  L++R A   D  K
Sbjct: 280 LGIAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKK 339

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAA A++ A        + A A+  +AM+ +GG GY++E    RHYR++    I  
Sbjct: 340 PFTKEAAMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYE 392

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 393 GTSEIQRLVVAGHLLK 408


>gi|254775186|ref|ZP_05216702.1| FadE20_1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 387

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 135/378 (35%), Gaps = 30/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  ERW     H        ++   GL        +       A  +        A  +
Sbjct: 33  TPNQERW--AAQHAVDREFWNKAGDAGLLGLDLPEEYGGAGGDFAMNVVVQEELAYAYDQ 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +    + W PKI S E               + + +TE   
Sbjct: 91  GFGFAVHSPIVAHYIWAYGSDEQRRRWLPKIISGE-------------AVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ ++ +  ++  D  Y ++G K F+S+    D  +++A+ +   G   V  ++ +  
Sbjct: 138 GSDLQSVKTTARRDGD-FYVINGSKTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETD 196

Query: 267 PN--GLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDS 320
            N  G    R+  K+G  +  T EL FS+        L     +    + +      L  
Sbjct: 197 ENLAGFERGRVLAKMGQHAQDTRELFFSDMRVPVANLLGAQEGLGFYQLMEQLARERLII 256

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +  +   V++ EAI Y+R R   G  +      K  +AD   +  A   +       +
Sbjct: 257 ATICAALAEVAVLEAIKYSREREAFGRPIGKFQHTKFVLADCKTEALAIKTMVDYAVGQY 316

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K+    A+ A       K +  + +  ++ + ++  GG GY+ E  IA  Y  S  N
Sbjct: 317 LDGKNDPATASMA-------KLFAAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVN 369

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 370 RIYGGTSEIMKEIISRSL 387


>gi|116250362|ref|YP_766200.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255010|emb|CAK06084.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 598

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 99/495 (20%), Positives = 168/495 (33%), Gaps = 75/495 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E  R+A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAGRVAEE 51

Query: 80  NTPQLHAY-GPGG-ERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
               L+      G  R D   V     +    +     G         F        + +
Sbjct: 52  ALFPLNYSGDQEGCARHDDASVSTPKGFKEAYKAYREGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ AL    +      + PK+    +  T       
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAALLVHGSDEQKATYLPKMVDGTWSGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y +SG K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTKAVPQADGSYKISGQKIFISAGEHDLTDNIIHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L       G+ N +    +++K+G  +NAT  + +    GF
Sbjct: 217 IEGAPDGTKGISLFIVPKFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A  YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R +  I     A  A     A   D A   ++E           ++ PI
Sbjct: 337 ADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRAADEKERQTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTL 472
              G      LF  +
Sbjct: 457 ALNGGRAAMALFKEI 471


>gi|322495519|emb|CBZ30824.1| putative acyl-CoA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 411

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 141/355 (39%), Gaps = 26/355 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDW 174
           +   +PVV K+A       +   A LE         +++    +    AL  T  V    
Sbjct: 54  EGKMDPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPALSVTVDVQNTL 113

Query: 175 APKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
              IF   + +       P           LTE   G+D  A+ ++ +K           
Sbjct: 114 VNNIFFNFANDAQRRKYLPKLAKDTVGCFCLTEAGSGSDAFALNTKAEKKGSKWVINGSK 173

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
            +  +   +  F+++A  +   G   +   + D S   G+   R +NK+G R+++T EL 
Sbjct: 174 LYITNGGWAGIFLVMATADPSKGYKGITCFVVDSSETPGVSVVRTENKLGIRASSTAELR 233

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
           F N     + + NV     +  KI I  L+   + +    V +A+      + Y  +R  
Sbjct: 234 FENV---EVSEENVIGEVGKGYKIAINILNEGRIGIGAQMVGIAQGSLDIVMPYLFQRKQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   M+   A+ A+++ AA  + +  +      ++  ++AA A+  A +     
Sbjct: 291 FGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEAFIQDAAMAKYFASVV---- 346

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              A    + A+E  GG G++++  + R YR++   +I  G+    +  +  +++
Sbjct: 347 ---AEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGTSIIQLQTIAKMIK 398


>gi|300711203|ref|YP_003737017.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299124886|gb|ADJ15225.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 372

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 134/393 (34%), Gaps = 34/393 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVV 128
           Q   R             P     D+ +  P  AW  L        L       ++    
Sbjct: 7   QRAIRDVVREVAV-EELRPRAAEADRTQTFPEDAWDELADL----DLTGLAVPEAYGGFD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
             +              L     +S    + + +A   T  + + W P++ S        
Sbjct: 62  ADRTTYSLVNEELAYGHLSVATALSVHCLATACIARFGTDGLKERWLPEMVSG------- 114

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                        L+E   G++ A ++++ ++  +        +W  +   +   I+ A+
Sbjct: 115 ------RPVGAFALSEPEAGSNPAEMSTRAERDGEEYVIDGKKQWITNGSRAGVVILFAK 168

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVS 305
                G   + + L     +GL   + + K+G R++ T  L F            +    
Sbjct: 169 T----GENEITQFLVPADSDGLEVGKKEEKLGLRASDTTALLFDGVRVPEENRLTEEGRG 224

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 +     +  A  SV   + ++ +A+ YA  R   GG + +   ++  +AD+   
Sbjct: 225 LSAALSILTGGRIGIASQSVGLAQAAMDDALAYATEREQFGGPISEIQTIRHKLADMETK 284

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L+   A   D  +    +       A I KY+  + A  +  EA++  GG+GY 
Sbjct: 285 LRAARLLTREAARREDAGEDPRLD-------ASIAKYFASEAAMEITNEAVQIHGGAGYT 337

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  + R+YR++   +I  G+       +   L
Sbjct: 338 TDFDVERYYRDARITTIYEGTSQIQKNVIAREL 370


>gi|167834906|ref|ZP_02461789.1| putative acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 378

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 138/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+   +++        + +        A    
Sbjct: 28  PHHERWEEQGYVD--REVWTKAAAAGYHCASMPQAYGGAGADIRYSVVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSEALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +   G Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTTAVRDG-GHYVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTDM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAEMKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW  ++   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|192289597|ref|YP_001990202.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283346|gb|ACE99726.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 381

 Score =  256 bits (653), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/416 (19%), Positives = 147/416 (35%), Gaps = 49/416 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + +EL+   +      A++LA                  R  K+    AW  L     
Sbjct: 6   PWMTEELDTFRDQFRKFLAKDLAP----------HSDKW--RKQKMVDRSAWLKL----G 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTP 168
             G         +  +    A+   AA    M ++    L   +V+S   A  +    + 
Sbjct: 50  EMGALLPSVPEQYGGLGASFAY--DAAVYEDMEKIVPDALSGVTVSSGIVAHYILNYGSE 107

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P +   E             +   + +TE   G+D+ ++ +  +   D  Y +
Sbjct: 108 EQKRRWLPGMARGE-------------LIGAIAMTEPGTGSDLQSVRTTAKLDGDD-YVI 153

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++    D  I++A+  G  G   +  ++ E     G    R  +KIG  ++ T
Sbjct: 154 NGQKTFITNGQNCDLIIVVART-GGAGAKGLSLIVLETKDNPGFKRGRNLDKIGLHASDT 212

Query: 287 VELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F N        L      G V+ M+ L    L  AI +V+ M  ++A    Y R R
Sbjct: 213 SELFFENARTPKENLLGGEEGKGFVQLMQQLPQERLIIAIGAVAAMERAVALTSEYTRER 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +I+       +A+   +   A                         + A + K+
Sbjct: 273 KAFGQPIIEFQNTAFTLAERKTEAFIARVFVDYCLVQLVAGN-------LDAVTASMAKW 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +     + E ++  GG GY++E  I R + +S    I  G+   M L +   L
Sbjct: 326 WTTQKQVETVDECLQLHGGYGYMQEYPIGRMFIDSRIQKIYGGTNEVMKLLIARSL 381


>gi|218900156|ref|YP_002448567.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
 gi|218541848|gb|ACK94242.1| acyl-CoA dehydrogenase [Bacillus cereus G9842]
          Length = 594

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 47  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 98

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 99  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 145

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 146 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 203

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 204 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 261

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 262 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 321

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 322 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 382 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 441

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 442 MMMMPEEVGDEPLALQKYL 460


>gi|84500240|ref|ZP_00998506.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84392174|gb|EAQ04442.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 575

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 83/474 (17%), Positives = 166/474 (35%), Gaps = 45/474 (9%)

Query: 66  LSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +     E+ ++A+     L+      P       V     +       +  G        
Sbjct: 37  VDAILSEVGKLADEVFAPLNRSGDIDPARLENGVVRTSKGFADGYAALVEGGWLGLAAPA 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   Q            + L  G     +      +       + + + P++ S E
Sbjct: 97  EHGGMGLPQTLNCAVNDFLSASCLSLGLNPLLTQGQIEALQHHAPDWMKELYLPRLISGE 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE + G+D+ A+T++     DG Y ++G K ++S    D 
Sbjct: 157 WTGT-------------MNLTEPQAGSDVGALTTRAVAQDDGTYAVTGQKIYISWGDHDF 203

Query: 243 -----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++         +  F+VP+ + D     G PN L    L++K+G   + T
Sbjct: 204 GGNVCHLVLARLPEAPAGTRGISLFMVPKYIPDADGNLGDPNSLRVVSLEHKMGLHGSPT 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             ++F    G+L+G+ N     +  M     L   +  +     +L  AI YA  R    
Sbjct: 264 CVMQFDGATGWLVGEENKGMAAMFTMMNNARLGVGMQGIGIAEGALQHAIVYALERKQGR 323

Query: 347 GI----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--AYAR 394
                       ++D   ++R IA +  D  AA +++     + D A +  + A  A A 
Sbjct: 324 TPLEGAEGGTGTILDHADVRRMIATMRADTFAARSIALACGVAIDMAAATGDAAWKARAA 383

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL-D 453
            + PI K +       V    ++  GG GY+EE   A++ R+    +I  G+     +  
Sbjct: 384 FLTPIAKGFGTDTGMRVSEMGVQVHGGMGYVEETGAAQYSRDVRVTAIYEGTNGIQAMDM 443

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           V   +  G +    L   +      +   +  +        +  +    ++  +
Sbjct: 444 VARKMMDGGDAANALIDEISATAEKARADLPELGESLWEAAETLREATEWMVSR 497


>gi|261338785|gb|ACX70074.1| RH10980p [Drosophila melanogaster]
          Length = 644

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 162/413 (39%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 179 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 225

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 226 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 285

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 286 PEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 342

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 343 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 402

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 403 LEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTN 455

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 456 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 515

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 516 GELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAMV 568


>gi|195329634|ref|XP_002031515.1| GM26034 [Drosophila sechellia]
 gi|194120458|gb|EDW42501.1| GM26034 [Drosophila sechellia]
          Length = 420

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/439 (16%), Positives = 152/439 (34%), Gaps = 48/439 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA--------YGPGGERW 94
           L+ +               G    +     LA ++  +                P     
Sbjct: 4   LIRVARTLGQRSSGTWSARGIGAGNRGIACLAALSETHQILQKTCREFANAELAPKARHH 63

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E +PA    +RR    GL        +        ++  A  +  +A+ +A   +  
Sbjct: 64  DREELYPA--EQVRRLGELGLMSVTVREEYGGSGLD--YQAYAIGMEEVARGDAAVSIVM 119

Query: 155 SVTSASM-------VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                 +       V    T +  +D+       E+                  L+E   
Sbjct: 120 GTVECLLNNLYLGAVQQHGTEQQKQDFLVPYTQGEH-------------IAFYALSEPGN 166

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  +S  +   I+ A V+  +    +   L     
Sbjct: 167 GSDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSLKHKGITAFLTPKDV 226

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            GL   + ++K+G R+ +T +L   +          V   P +  KI +  LD   + ++
Sbjct: 227 PGLSIAKKESKMGMRATSTCQLMLEDVQVPRS---RVLGAPGDGFKIAMQSLDCGRIGIA 283

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                +A+     A+ Y+++R   G  L    ++++ +AD+A  +  +  L++R A   D
Sbjct: 284 AQATGIAQAALELAVDYSQKRVAFGKQLARLQLIQQKLADMATRVEISRLLTWRAAWLMD 343

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                ++EAA A++ A     +C         + ++ +GG GY  +     +YR +    
Sbjct: 344 NGLPITKEAAMAKLHASEAATFC-------AHQCIQILGGMGYTTDLPAELYYRNARVTE 396

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + + N + +
Sbjct: 397 IYEGTSEIQRIVIANAVLR 415


>gi|294676032|ref|YP_003576647.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           capsulatus SB 1003]
 gi|294474852|gb|ADE84240.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB
           1003]
          Length = 591

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/538 (18%), Positives = 193/538 (35%), Gaps = 74/538 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIH 112
            +LE               ++A+     L+A     G + +   V     + A       
Sbjct: 30  ADLER---EFTEAVLDAAGKVASEVLAPLNAVGDTQGCKLENGAVRVPAGFDAAFAAMKE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G      +  +               +++ A +        +  + S +    T     
Sbjct: 87  GGWTALDCNPEYGGQGMPYVINCAVGEMFVSANMAFNMYQGLTHGAVSAIEAHGTDAQKA 146

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ + ++  T             + LTE   GTD+  + ++ +  +DG Y ++G K
Sbjct: 147 TYLPKMVACDWTGT-------------MNLTEPHCGTDLGLLRTKAEPQADGSYKITGTK 193

Query: 233 WFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLK 276
            F+S+   D       ++LA+  G       +  F+VP+ L +     G+ N +   +++
Sbjct: 194 IFISAGDHDLAENIIHLVLAKAPGGGEGTKGISLFIVPKFLVNADGSLGARNAVSVGKVE 253

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G   +AT  + +    G+LLGDL+     +  M     L   +   +    +   A+
Sbjct: 254 HKMGIHGSATCVMNYDGATGYLLGDLHKGMRAMFTMMNEARLGVGLQGYAVAEAAYQAAL 313

Query: 337 HYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  LI  P ++RA+ D    +  A A +F  A   D A 
Sbjct: 314 AYAKDRLQGRAVTGVANPAGPADPLIVHPDIRRALMDQKSFLEGARAFTFWGATLIDRAH 373

Query: 385 --SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +E      +M P+ K +          +A +  GG GYIEE+ +++  R++    I
Sbjct: 374 GLQDAEAEGLISLMTPVIKGFLTDKGFEACVQAQQVWGGHGYIEEQGMSQFVRDARITMI 433

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             G+     LD++                  +     GK ++       + CK   G  R
Sbjct: 434 YEGANGVQALDLVG----------------RKLAAEGGKPLMGFFEMVKAECKAHDGDER 477

Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
                 AL  ++  +  AGM      FL+N       +    L G ++  H++  + L
Sbjct: 478 MKPFTDALKVASKQMQAAGM-----FFLQN----AAKNPDAALSGSYDFMHLMGHVCL 526


>gi|218295830|ref|ZP_03496610.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243568|gb|EED10096.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 387

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 149/381 (39%), Gaps = 30/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLE 147
           PG    D+    P    L+R+    G+  +    ++           R            
Sbjct: 28  PGAAERDRTGAFP--WDLVRKMAQFGVFGATVPEAYGGAGLPMRLFARMVEEVAYYDGAL 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +  +   + L    +   ++ PK+ S E                  GLTE   
Sbjct: 86  ALTVASHNSLATGHILLAGNEKQKAEFLPKLASGE-------------ALGAWGLTEPGA 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G+D AA+ ++ + +  G       ++     ++  ++++A+ +           +     
Sbjct: 133 GSDAAALKTRAEAVPGGFLLNGTKQFITQGSVAGVYVIMARTDPAPSPEKRHLGISAFAF 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                GL   R + K+G  ++ T +L   + F    G L     G  + +++L    +  
Sbjct: 193 FRPEKGLRVGRKEEKLGLNASDTAQLLLEDLFVPEEGLLGERGKGFYDVLRVLDGGRIGI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A M+V   R +L  A+ +A+ R   G  + +   +   +A++A ++ AA  L  + A   
Sbjct: 253 AAMAVGLGRAALDFALRHAKEREAFGRSIAEFQGVSFKLAEMATELEAARLLYLKAAELK 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  + EAA A       K +  ++A     EA++ +GG GY+++  + R++R++   
Sbjct: 313 DAGRPFALEAAQA-------KLFASEVAVRACDEAIQILGGYGYVKDYPVERYWRDARLT 365

Query: 441 SILLGSGNAMVLDVLNLLEKG 461
            I  G+   + + +   L +G
Sbjct: 366 RIGEGTSEILKVVIARRLLEG 386


>gi|91218198|ref|ZP_01255146.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
 gi|91183656|gb|EAS70051.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
          Length = 402

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 133/372 (35%), Gaps = 27/372 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  R+   GL C      +       +             +        S   A  + 
Sbjct: 47  RDIWERAGELGLLCIDVPEHYGGSGLDFSFSALFIEELAKEGISGPGFSLHSDIVAPYLL 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +                M    +   +G+TE   G+D+ AI +      D
Sbjct: 107 KYGTEAQKQKYL-------------HLMAAGKMITSIGMTEPNCGSDLQAIKTNAVDKGD 153

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++  MSD  I+  + +   G   V  L+ + S  G        KIG +
Sbjct: 154 H-YLVNGQKTFITNGYMSDMSIVAVKTKMGTGEEGVSLLIMESSFKGFEKGTPFKKIGMK 212

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F N       LLG+  +    +        L  A+ ++ G   ++ + + Y 
Sbjct: 213 AQDTCELFFDNVKVPKENLLGEEGLGFKIMMTELARERLTVALNAIGGAEGAIEKTLAYT 272

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R      +      +  +A+    +    A   R      + K  +E A+ A+  A  
Sbjct: 273 STRTAFKQPIAGFQNTQFKLAECTTQLQVHQAFLDRCTLLVSKHKLTAESASMAKYSA-- 330

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 +M   V+ E ++  GG GYI +  IAR Y ++    I  G+   M L +   L 
Sbjct: 331 -----TEMHGKVVDECLQLFGGYGYIWDYPIARMYADNRVARIYAGTNEIMKLLIARGLF 385

Query: 460 KGTNLFEQLFST 471
           K  +LF+Q+ +T
Sbjct: 386 K--DLFQQMKAT 395


>gi|331005707|ref|ZP_08329071.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
 gi|330420499|gb|EGG94801.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989]
          Length = 591

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 85/475 (17%), Positives = 181/475 (38%), Gaps = 53/475 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVE 98
           +L  L            E     ++S   +E A+ A      ++      G     D V+
Sbjct: 14  VLRHLANFSELEKLPGFEDASPDMVSAILEEAAKFAQEELAPINWSGDQAGVSIVDDNVK 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P + A  ++ + +G         +       +  + A+  +  A +        S + 
Sbjct: 74  SAPGFAAAYQQFVENGWLGLAQPEQYGGQGLPFSLHMAASEFWNSANMSFALCPMLSASG 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              V    +  + + +  K+ S E+  T             + LTE + G+D+AA+T++ 
Sbjct: 134 IDAVLAHGSDALKETYLEKMVSGEWTGT-------------MLLTEPQAGSDLAALTTKA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQ-VEGRVGCFLVPRLLEDG---SPNG 269
           ++  D  Y ++G K F++    D        +LA+  +   G   +   L      +P+G
Sbjct: 181 ERNGDH-YLITGSKIFITWGDHDMTDNIVQFILARLPDAPPGVKGISLFLVPKYHVNPDG 239

Query: 270 LCYQRL--------KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
                L        ++K+G  ++ T  + F +     G+L+G+ N     +  M I   L
Sbjct: 240 -SLGELNDSKPVSVEHKMGIHASPTCVMSFGDNGGAVGYLVGEENNGLACMFTMMIHARL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATA 371
           +  +  V     +   A+ YA  R     +       + + P ++R +  +     A+ A
Sbjct: 299 EVGLEGVGLSERAYQGAVDYAINRKQGKKLGHEGSVSIAEHPDVRRMLMLMRSLTEASRA 358

Query: 372 LSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +++  + ++D +K   +            ++ PI K W  ++A  V    ++ +GG G+I
Sbjct: 359 IAYVTSAAYDHSKYNPDTNQQQYYLQRLELLTPIVKAWPTEIAQEVTGLGVQVLGGMGFI 418

Query: 426 EERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           EE  +A+HYR++   +I  G+       L    LL         + + +++ +  
Sbjct: 419 EESGMAQHYRDARIITIYEGTTGIQSNDLIGRKLLRDKAEAMSIVIAEIQEVVAQ 473


>gi|83591775|ref|YP_425527.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83574689|gb|ABC21240.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 589

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 95/498 (19%), Positives = 184/498 (36%), Gaps = 58/498 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLH-AYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
           E ++     E  ++A      L+      G R +   V     +       +  G     
Sbjct: 34  EDLVEAVLSEAGKLAADVLAPLNAPGDRQGSRLENGTVRTPDGFAEAYGHFVDGGWTGVP 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +D  +               ++  A +  G     S  +  ++    +      W PK+ 
Sbjct: 94  FDPEYGGQGLPWMVGTALNEIWQAANMSFGLAPLLSAGAIELLDSHGSAEQKAQWLPKLI 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHKWFLS 236
           S E+  T             + LTE + G+D+AA+ ++      + DG+Y + G K F++
Sbjct: 154 SGEWTGT-------------MNLTEPQAGSDLAAVRTKAVAAPDLGDGVYRIFGSKIFIT 200

Query: 237 SPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIG 280
               D       ++LA++ +   G   +   +            G+ N L    L++K+G
Sbjct: 201 YGDHDLAPNIVHMVLARISDAPPGIKGISLFIVPKTLPTAEGGLGAANDLRCVSLEDKLG 260

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             ++ T  + F +     G+L+G  N     +  M     L   +  V     +   A+ 
Sbjct: 261 IHASPTCVMAFGDQGGAVGYLVGAANHGIEYMFTMMNNARLGVGVQGVGQAERATQAAVE 320

Query: 338 YARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           YAR R   G           +I  P ++R +  +     AA  +++  A + D AK  ++
Sbjct: 321 YARARVQGGDASVRGGPSVSIIHHPDVRRMLMTMRARTQAARLITYLTAAALDTAKRHAD 380

Query: 389 EAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A        A ++ PI K W  +    V    ++  GG GYIE+   A+  R++   SI
Sbjct: 381 AALRAEAATRAALLTPIAKAWSTEAGIDVANLGIQVHGGQGYIEDAGAAQFLRDARIASI 440

Query: 443 LLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-CKEDKG 499
             G+     +D++   +L  G      L S L   +       +  L+  ++    + + 
Sbjct: 441 YEGTNGIQAIDLVGRKVLRDGGVAARALASELAA-IAERSAATLPGLQAPLADGLADLEA 499

Query: 500 LARF-LTEKIALASSAAA 516
              + L+   A+++ AAA
Sbjct: 500 ALEWVLSHPDAVSAQAAA 517


>gi|330959426|gb|EGH59686.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 383

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 139/380 (36%), Gaps = 36/380 (9%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W   AL+ +    GL   +    +            A      A  
Sbjct: 27  PHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGTYIDYVAYALAVEEISAADA 82

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +     +    T      W  K+ S                     LTE 
Sbjct: 83  ATGTLMSVHSSVGCGPILNFGTDEQKHTWLEKLASG-------------RAIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G++   + ++ +   D  + ++G K F+S+   ++  I+ A  + ++G   +   L  
Sbjct: 130 HAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAELAIVFAVTDPQLGKKGLSAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    R ++K+G R++ T  +  ++        L      +     L  L+   + 
Sbjct: 189 TENPGFTVDRSEHKMGIRASDTCAVTLNDCRIPAANLLGERGKGLS--IALSNLEGGRIG 246

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +       A+ YAR R      +I+   +   +AD+   I AA  L+   A  
Sbjct: 247 IAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLADMHTRINAARLLTLHAARL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               +    EA+ A++       +  +MA  V ++A++  GG GY+E+  + R+YR++  
Sbjct: 307 RSAGQPCLSEASQAKM-------FASEMAEWVCSKAIQIHGGYGYLEDYPVERYYRDARI 359

Query: 440 NSILLGSGNAMVLDVLNLLE 459
             I  GS     L +   L 
Sbjct: 360 TQIYEGSSEIQRLLIARELR 379


>gi|229094114|ref|ZP_04225198.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-42]
 gi|228689326|gb|EEL43145.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus Rock3-42]
          Length = 608

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEQ-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|149372377|ref|ZP_01891565.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149354767|gb|EDM43330.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 387

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 148/382 (38%), Gaps = 34/382 (8%)

Query: 104 HALLRRSIHDGL------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           H   R+S  D L      H   W+ +   + R    K      + +A  EA   M   + 
Sbjct: 9   HEFFRKSFRDFLKKEVVPHIDKWEET-GTIDRFIWKKFGEMGYFGLATPEAYGGMDLDIF 67

Query: 158 SASM--------------VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
              +               A+     +      K  + E      AP         L +T
Sbjct: 68  YTVIFIEELQRINSGGFAAAMWAHEYLAMTHLNKEANHEQKLKYLAPSVTGEKIGCLCIT 127

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E  GG+D+  + +   K  D  Y ++G K F+++ + SD  I+ A+    +G   +   +
Sbjct: 128 EPFGGSDVGGMRTTAVKEGDH-YIINGSKTFITNGIYSDYLIVAAKTSPELGNKGISIFV 186

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
            D    G+   +L +K+G R++ T E+ F N       L+G+ N     +     L  L 
Sbjct: 187 LDRDMPGVSATKL-DKLGWRASDTGEIAFDNVKIPAANLMGEENQGFPYIMQHFALERLI 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + +    +L   I Y + R   G  +     ++  +A +A ++      ++  A  
Sbjct: 246 MAVNAHARSEWALEYTIAYMKERTAFGKSISKFQALRHKVAQLASEVEMCKTFNYVTAQR 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               +   +EA  ++++         K++  V  E ++ +GG GY+EE  +AR+ R+S  
Sbjct: 306 LGNGEYVVKEATMSKLL-------STKVSDDVAYECVQLLGGYGYMEEYPLARNLRDSRL 358

Query: 440 NSILLGSGNAMVLDVLNLLEKG 461
             I  G+   +   +  ++  G
Sbjct: 359 GPIGGGTSEILKEIISKMVIDG 380


>gi|33592543|ref|NP_880187.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33596196|ref|NP_883839.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33601607|ref|NP_889167.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33572189|emb|CAE41735.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33573199|emb|CAE36854.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
 gi|33576044|emb|CAE33123.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|332381961|gb|AEE66808.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 384

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 138/407 (33%), Gaps = 30/407 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +  A+ A +Y   +L  +     RWD     P       R+   G       
Sbjct: 2   DFELTDEQRAFAQAARDYAQGELAPH---AARWDAEGIFP--REAFARAGELGFCAIYAS 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +   +                    ++    +  MV     P V + W P + S 
Sbjct: 57  EEIGGLGLPRLDATLVFEEMAAVDPSTTAFLTIHNMATWMVGQWARPAVREQWGPLLASG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D  ++ ++ ++  D         +      +D
Sbjct: 117 E-------------KLASYCLTEPNAGSDAGSLATRAERQGDDYVLNGAKAFISGGGDTD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A+  G  G   V          G+ Y R + K+G  S +T  + F          
Sbjct: 164 LLVVMART-GGDGPGGVSAFAVPADAAGIAYGRKEEKMGWNSQSTRPITFEQVRVPASHM 222

Query: 302 LNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G    MK L    ++    SV   + ++  A  Y   R      L     ++  
Sbjct: 223 LGEPGEGFKIAMKGLDGGRINIGTCSVGAAQGAMDAARRYMDERRQFNRKLAQFQALQFK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + AA  +    A   D        +A A     + K +   M   +  +A + 
Sbjct: 283 LADMATHLVAARQMVRLAACKLDAG------SADASTYCAMAKRFATDMGFQICLDAQQI 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL 464
            GG GY+ +  + R  R++  + IL G+   M + V   LLEKG ++
Sbjct: 337 HGGYGYLRDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLEKGADI 383


>gi|163760734|ref|ZP_02167814.1| Ivd, isovaleryl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162282056|gb|EDQ32347.1| Ivd, isovaleryl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 382

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 147/411 (35%), Gaps = 41/411 (9%)

Query: 61  LGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           LGE +     + +AR A +   P         +        P    L +     GL    
Sbjct: 5   LGEEI-DALRETVARFARDRVAPVADETDRDNQ-------FPMH--LWQEMGELGLLGMT 54

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +  F        AH +    +   +        + S    + +    T      + PK+
Sbjct: 55  ANPDFGGTGMGYLAHTVAMEEISRASASIGLSYGAHSNLCVNQINRWGTEAQKAQYLPKL 114

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E+                L ++E   G+D+ ++  + +K +D         W  + P
Sbjct: 115 CTGEH-------------VGALAMSEPGSGSDVVSMKLRAEKRNDRYVLNGNKMWITNGP 161

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            ++  ++ A+ +       +   L +    G    +  +K+G R + T EL F +     
Sbjct: 162 DANTLVVYAKTDPEAKSRGITAFLIEKGMAGFSTAQKLDKLGMRGSNTCELVFEDCEVPF 221

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQ 352
               NV     +  +IL+  LD   + +SG     M  ++   + Y   R   G  + + 
Sbjct: 222 D---NVLGEEGQGARILMSGLDYERVVLSGGPLGIMAAAMDVVVPYCHERKQFGEPIGNF 278

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +M+  +AD+   + A  A  + +A + D  ++  ++AA           +  + A  V 
Sbjct: 279 QLMQGKLADMYTTMNACRAYVYAVAAACDRGETTRKDAAG-------CILYSAEKATQVA 331

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            EA++ +GG+GYI +    R  R++    I  G+     + +   +   T 
Sbjct: 332 LEAIQALGGNGYINDYPTGRLLRDAKLYEIGAGTSEVRRMLIGREMMAETA 382


>gi|23500808|ref|NP_700248.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161621136|ref|YP_001595022.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|254703399|ref|ZP_05165227.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254710693|ref|ZP_05172504.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256015850|ref|YP_003105859.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|256029076|ref|ZP_05442690.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256058757|ref|ZP_05448974.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256157266|ref|ZP_05455184.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256253757|ref|ZP_05459293.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|260167846|ref|ZP_05754657.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|260567673|ref|ZP_05838142.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261220891|ref|ZP_05935172.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261318262|ref|ZP_05957459.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261322696|ref|ZP_05961893.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261754026|ref|ZP_05997735.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|261757282|ref|ZP_06000991.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265986060|ref|ZP_06098617.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265995753|ref|ZP_06108310.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|23464467|gb|AAN34253.1| acyl-CoA dehydrogenase [Brucella suis 1330]
 gi|161337947|gb|ABX64251.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|255998510|gb|ACU50197.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260154338|gb|EEW89419.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|260919475|gb|EEX86128.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261297485|gb|EEY00982.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261298676|gb|EEY02173.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|261737266|gb|EEY25262.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261743779|gb|EEY31705.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|262550050|gb|EEZ06211.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264658257|gb|EEZ28518.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 380

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 124/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERLIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|229158607|ref|ZP_04286666.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 4342]
 gi|228624921|gb|EEK81689.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus ATCC 4342]
          Length = 608

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|94314426|ref|YP_587635.1| long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358278|gb|ABF12366.1| Long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 385

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 143/399 (35%), Gaps = 35/399 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLR----------RSIHDGLHCSIWDRSFEP 126
           A +  P+L        R+ + E  P      +          ++   GL C      +  
Sbjct: 4   APWMNPELETLRDSARRFYEAELLPHEERWAQQQCVDRDVWYKAAEAGLLCVGIPEEYGG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                 H+                    S   A  +    + +  ++W PK         
Sbjct: 64  GGGNFLHEAVIFAEQGRMLCPGLGNSLHSGIVAHYIHNFASEQQKQEWLPK--------- 114

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
               M K  +  GL +TE   G+D+ +I +  +K            +  +   ++   ++
Sbjct: 115 ----MAKGELVGGLAITEPGAGSDVQSIRTAARKEGGDYVINGAKTYITNGSTANLICVV 170

Query: 247 AQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-- 303
            + +  +G   +  ++ +     G    R  +K+G  S  T EL F +        L   
Sbjct: 171 VKTDPNLGAKGISIIVVETDKVEGFRRGRTLSKVGLHSQDTAELFFDDVRVPQANLLGNV 230

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G  + MK L    + +A MS++ M  ++ E + +A  R V G  L+     +  +A+
Sbjct: 231 EGQGFKQLMKELSRERVITAFMSMACMERAIEETLKFAADRKVFGQTLLSMQNTRFKLAE 290

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               +  A A+    + S  E +  SE AA A+        W       V+ E ++  GG
Sbjct: 291 CETKLTLAKAMLSHCSASLLEGQLSSEIAAMAKW-------WITDACGQVVDECVQLHGG 343

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +G++ E  IAR Y+    + IL G+   M   +   LEK
Sbjct: 344 AGFMLEYPIARLYQNVRIHRILAGTNEIMKEVIARELEK 382


>gi|311029636|ref|ZP_07707726.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13]
          Length = 391

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 125/378 (33%), Gaps = 33/378 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y       D++     W  +       G  C   D  +        + +           
Sbjct: 39  YDEW--ESDRIIPRSFWTKM----GEQGYLCPDIDEKYGGSETDWGYSVVINEELERVGT 92

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +      +    T    + W P   S                   + +TE  
Sbjct: 93  GLIGVALHNDIVVPYITSFGTEEQKQRWLPSCVSG-------------RTITAIAMTEPG 139

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ---VEGRVGCFLVPRLLE 263
            G+D+A I +  +   D  Y ++G K F+++ +    +++A     E +     V  L+ 
Sbjct: 140 TGSDLANIKTTARLEGDH-YIVNGAKTFITNGIHADLVIVAVKTDTEIQPQHRGVSLLVI 198

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    R  +K+G  S  T EL F +       LLG+       + D      L  
Sbjct: 199 ERGHQGFSRGRKLDKVGLHSQDTAELFFEDCKVPKENLLGEEGRGFLYLMDKLQQERLLV 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I +       L   I Y + R   G  +      +  IA++A ++    A         
Sbjct: 259 GIGAQIASEEMLQSTIDYVKSREAFGRPVSQFQNTQFKIAEMATEVEMGRAF-------L 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +             + K+   ++A  +  + M+  GG GY+EE  IAR YR+ P  
Sbjct: 312 DQLIADHIAGEDVVTKVSMAKWKLTEIARNIATQCMQLHGGYGYMEEYKIARRYRDIPVA 371

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+ + M   +   L
Sbjct: 372 SIYAGTNDIMKTIIAKNL 389


>gi|328554981|gb|AEB25473.1| acyl-CoA dehydrogenase [Bacillus amyloliquefaciens TA208]
          Length = 594

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 164/459 (35%), Gaps = 62/459 (13%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LLR++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDEIENHQFEHSVRLLRKAGDLGLLGADVPEEYGGIGLDKISSAFITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    T    K + P + S                     LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGTEEQKKTYLPDLASG-------------QRIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + + +  G
Sbjct: 160 LGAKTMAVLNEAGTHYILNGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKNYPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  +  YA +R      +    + +  +A ++  + A  +  +R    F++  SR
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPISSFTLTQEKLATMSARLYAMESSVYRTVGLFEDNMSR 335

Query: 387 -SEEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            +EEA           A   I   + K    +    +  E ++  GG G+++E  + R Y
Sbjct: 336 LTEEAQKDGREVAKSIAEYAIECSLNKMCGSETLDYIADEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK   L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVTSTFLKKAVKGQLPLFEKAKALQEELMMLMPEEPGSEP-- 453

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
                       +++K + R   +KIAL ++  A  + G
Sbjct: 454 -----------LEQEKYIVRQ-AKKIALLTAGLAAQKYG 480


>gi|85372839|ref|YP_456901.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84785922|gb|ABC62104.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 380

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 122/358 (34%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +     GL C         +              L     +      S  +A+ + 
Sbjct: 44  REIWKAVGEAGLLCPTVKEENGGLGLDFGFNCVLCE-ELSYIGSSAGFTLQSDITANYIE 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + +      + P + S               V   + +TE   G+D+  I +   +  +
Sbjct: 103 RLGSDEQRAKYLPGMVSG-------------DVITAIAMTEPGAGSDLQGIRTTAIEDGN 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            +       +  +   +D  I++A+ +   G      +L D    G    R  +KIG  S
Sbjct: 150 HLVINGSKTYITNGQNADVVIVVAKTDPSQGAKGTSLVLVDADTPGFERGRNLDKIGQHS 209

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F++       +LG        + +      L  A+ + +  + +  EA+ + +
Sbjct: 210 ADTSELFFNDCRVPKTNILGQEGRGFIHLMEELPQERLGIAVGAQAAAQRAFDEAVKFTK 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +    K  +AD+  ++    A            +  +EE       A   
Sbjct: 270 DRKAFGQTVFEFQNTKFTLADLKAELQVGWAHLDWAIKRHLAGELTTEE-------ASAA 322

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K W   +    +  +++  GG+GY+ E +IAR +R++    I  G+   M   +   +
Sbjct: 323 KLWHTDLQWKAVDTSLQLHGGAGYMNEYTIARLWRDARVTRIFGGTNEIMKEVISRGI 380


>gi|65316997|ref|ZP_00389956.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012]
 gi|228917638|ref|ZP_04081180.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228936306|ref|ZP_04099105.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228948734|ref|ZP_04111012.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228811041|gb|EEM57384.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228823422|gb|EEM69255.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228842015|gb|EEM87120.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 608

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|291393372|ref|XP_002713213.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 9
           [Oryctolagus cuniculus]
          Length = 621

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 86/479 (17%), Positives = 160/479 (33%), Gaps = 46/479 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+    P     L      GL        +  +        R   +          L
Sbjct: 85  RRIDQEGKIPD--ETLENLKKLGLFGIQVPEEYGGLGLSNTMYARLGEIISQDGSITVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +      + PK+ S E+                  LTE   G+D 
Sbjct: 143 AAHQAIGLKGIILAGSEEQKARYLPKLASGEH-------------IAAFCLTEPASGSDA 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCF-LVPRLLEDG 265
           A+I ++     D   Y L+G K W  +  ++  F + A+    +        +   + + 
Sbjct: 190 ASIRARAVLSEDKKHYILNGSKVWITNGGLASIFTVFAKTEIADPDGSVKDKITAFIVER 249

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+   + ++K+G R + T E+ F NT   +   L  V  G    M IL         
Sbjct: 250 DFGGITNGKPEDKLGIRGSNTCEVHFENTKVPVENVLGDVGGGFKVAMNILNSGRFSMGS 309

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                ++  +     YA  R      L +  +++   A +A       ++S+  A   D+
Sbjct: 310 TVAGMLKRLIEMTAEYACTRKQFNKNLSEFGLIQEKFALMAQKAYVMESMSYLTAGMLDQ 369

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                       I A + K +  + A   I+EA++ +GGSGY+++    R  R+S    I
Sbjct: 370 PGFPD-----CSIEAAMVKVFSSEAAWQCISEALQILGGSGYMKDYPYERMLRDSRILLI 424

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE---- 496
             G+   + + +    L   G  L  ++      ++ +  + +   LRDS+    +    
Sbjct: 425 FEGTNEILRMYIALTGLQHAGRTLTARIKELKRGNMNTVMETIGRRLRDSLGRTVDLGLT 484

Query: 497 ---------DKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                        AR L E +          L R G   + +  L  R  +   + + M
Sbjct: 485 GNLGVVHPSLADSARKLEENVYYFGRTVETLLLRFGKTIVEEQLLLKRVANILINLYGM 543


>gi|229141725|ref|ZP_04270255.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST26]
 gi|229199151|ref|ZP_04325834.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1293]
 gi|228584422|gb|EEK42557.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus m1293]
 gi|228641793|gb|EEK98094.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST26]
          Length = 608

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|193077827|gb|ABO12702.2| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii ATCC 17978]
          Length = 381

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 134/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDHWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V  + ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|169860487|ref|XP_001836878.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130]
 gi|116501600|gb|EAU84495.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130]
          Length = 416

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 134/363 (36%), Gaps = 32/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
           A+++     GL                   I A             L     T   ++V 
Sbjct: 76  AIIKGLYEQGLMGIETSAEHGGAESSFTSAIIAIEELAKVDPSVSVLCDVHNTLVNTVVR 135

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P++                S      L+E   G+D  A+ ++ +K  +
Sbjct: 136 KYGTKEQQDKWLPQL--------------SESKLGSFCLSEPASGSDAFALQTRAKKDGN 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +S  ++ F++ A V+   G   +   L      G+   + + K+G R+
Sbjct: 182 DWIINGSKMWITNSYEAEIFLIFANVDPSKGYKGITCFLATKDM-GVQIAKKEQKLGIRA 240

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337
           ++T  +   +       + N+  G  +  KI I  L+   + ++   + LA+     A+ 
Sbjct: 241 SSTCTISLDDLKVP---EENIIGGIGKGYKIAIEILNEGRIGIAAQMLGLAQGAFDKAVP 297

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +     M   IA  A+DI  A  +++  A   +E    ++EAA A    
Sbjct: 298 YTYERKQFGQAIGTFQGMAFQIAQAAIDIETARLMTYNAARRKEEGLPFTKEAAMA---- 353

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW   +A  V  +A+E  GG G+  E  I + +R+S   +I  G+ N  +  +   
Sbjct: 354 ---KYWASVVAQRVSGQAIEWAGGVGFTRETGIEKFWRDSKIGAIYEGTSNIQLQTIAKF 410

Query: 458 LEK 460
           ++K
Sbjct: 411 IQK 413


>gi|163736604|ref|ZP_02144023.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161390474|gb|EDQ14824.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 381

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 128/377 (33%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+     P   +L  +    G                +           MA
Sbjct: 22  EHIAPFARQWEAEGTIP--KSLWPQIGELGFGALYVSEETGGAGLSRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P I S                 +   LTE
Sbjct: 80  CPSVAAFLSIHNMCAKMLDSFASDEMKARIMPDILSM-------------KTVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  K ++G Y L+G K F+S        +     G  G   V  +  +
Sbjct: 127 PGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTVYVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL +  L+ K+G +S  T +++F +       L+G+                L+ A
Sbjct: 186 DGTAGLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGEEGKGFTYAMKGLDGGRLNIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D
Sbjct: 246 SCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +          A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 QGAPD------ASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M +     L
Sbjct: 360 ILEGTNEIMRVITARHL 376


>gi|327265911|ref|XP_003217751.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Anolis carolinensis]
          Length = 615

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/462 (17%), Positives = 156/462 (33%), Gaps = 54/462 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL        +  +        R   +       A  L +        + +  T    + 
Sbjct: 99  GLFGMQIPEEYGGLGLSNTMYARLGEITSQDGAIAVTLAAHQAIGLKGILIAGTKEQKEK 158

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGH 231
           + PK+ S EY                  LTE   G+D A+I S+     DG         
Sbjct: 159 YLPKLASGEY-------------TAAFCLTEPGSGSDAASIQSRATLSEDGKHFKLNGSK 205

Query: 232 KWFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
            W  +  ++D F + A+ E           +   + + +  G+ + + ++K+G R + T 
Sbjct: 206 IWISNGGIADIFTVFARTEVTDKDGTVKDKITAFIVERAFGGVTHGKPEDKLGIRGSNTC 265

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARR 341
           EL F NT   +   +  V  G    M I   L+S   S+           +     YA  
Sbjct: 266 ELHFENTKIPIDNVIGEVGGGFKVAMNI---LNSGRFSMGSASAGMIKKLIEMTAEYACT 322

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPIT 400
           R      L +  +++   A +A       ++++  A   D              I A + 
Sbjct: 323 RKQFNKKLSEFGLIQEKFALMARKAYVMESMAYLTAGMMDSPGIPD------CSIEAAMV 376

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458
           K +  + A   ++EA++ +GG GY+++    R+ R+S    I  G+   + + +    + 
Sbjct: 377 KVFSSEGAWICVSEALQILGGLGYMKDYPYERYLRDSRILLIFEGTNEVLRMYIALTGMQ 436

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-------------CKEDKGLARFLT 505
             G  L E++      ++  +        RDS+                   +  A+ L 
Sbjct: 437 YAGKILTEKIKEIKRGNVMVALNVFFNKFRDSMGRKVDLGLVGKDGVVHPSLEESAKKLE 496

Query: 506 EKI---ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           E +    +      L R G   + +  +  R  D   + + M
Sbjct: 497 ENVYYFGVTVEG-LLRRFGKTIVDEQMVLRRVADILINLYAM 537



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++D+ ++ R +ADI +++ A TA+  R + S        +          +T  +C
Sbjct: 513 FGKTIVDEQMVLRRVADILINLYAMTAVISRASRSIAIGLRNHDHEVL------LTNIFC 566

Query: 405 CKMAPA 410
            +    
Sbjct: 567 TEAGFQ 572


>gi|297278971|ref|XP_002801631.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
          Length = 385

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL       +   +          +             +  +      + + 
Sbjct: 41  LIRRAWELGLMNPHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 101 GNEQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   +  + +LA+ +              + +    G+   R +  +G R
Sbjct: 148 IINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 208 CSDTRGIVFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEAT 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +LI+   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 265 KYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 318 ASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 377


>gi|84623559|ref|YP_450931.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84367499|dbj|BAE68657.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 597

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 92/525 (17%), Positives = 175/525 (33%), Gaps = 67/525 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                     D L    +                 ++    +E  R        L++   
Sbjct: 7   PLTDFRFALHDVLDADALFARLGYADAS-----ADIIDAVLEEAGRFTAQVLAPLNSVGD 61

Query: 89  PGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             G  +DK    V   P + A   + +  G +    +  F          +  + +   A
Sbjct: 62  EIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L  G     S  +   +           +   +    +  T             + LTE
Sbjct: 122 NLAWGTFPLLSHGAMEALRQHGEAWQQDVFLTPLIDGRWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              GTD+  + ++ +  +DG Y ++G K F+++   D       ++LA++         +
Sbjct: 169 PHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGI 228

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             F+ P+   D     G  N L    +++K+G +++ T  + F    G+L+G  +     
Sbjct: 229 SLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQPHKGLQA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   +  +     +   A+ Y R R  S               +I  P ++
Sbjct: 289 MFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPADPIIVHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPA 410
           R +  I      +  LS   A+  D A        R++       + PI+K    + +  
Sbjct: 349 RMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPISKACQTEWSVE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-----LEKGTNLF 465
               A++C GG GYI E  + +  R++   +I   +     LD++          G  LF
Sbjct: 409 NTYHALQCFGGHGYIREYGMEQLARDARITTIYECTTGIQALDLIGRKTATSQAAGLKLF 468

Query: 466 EQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
                T    QD  ++  + I  LRD    C E   L R + ++ 
Sbjct: 469 LTDVDTFANAQDGNAALAEFIKPLRD---KCSEWAMLTRDVLDRA 510


>gi|86356210|ref|YP_468102.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86280312|gb|ABC89375.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 598

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/531 (19%), Positives = 179/531 (33%), Gaps = 77/531 (14%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E A++A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAAKVAEE 51

Query: 80  N-TPQLHAYGPGGERWDK---VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
              P  ++    G R      V     +          G         F        + +
Sbjct: 52  VLFPVNYSGDQEGCRRQDDASVSTPKGFKEAYNAYREGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ A+    T    + + PK+    +  T       
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y +SG K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTRAVPQADGSYKISGQKIFISAGEHDLTDNIVHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L          N +    +++K+G   NAT  + +    GF
Sbjct: 217 IEGAPEGTKGISLFIVPKFLVGKDGALGARNAVTCGAIEHKMGIHGNATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A +YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGVKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R++  I     A  A     A   D A   ++E           ++ PI
Sbjct: 337 ADPIIVHPDIRRSLMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDRGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
              G      LF  +    +   S +K+    R       + +G   +  +
Sbjct: 457 ALNGGRAAMALFKEIGDFCEENRSDEKLSFFTRHLKKGLNDVQGATMWFMQ 507


>gi|239504114|ref|ZP_04663424.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB900]
          Length = 387

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 142/395 (35%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEMTPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  +    +  +     P I S E      
Sbjct: 69  DPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQHFGSEELKARVLPGIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    LK K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++         EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALACYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E         + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|241202995|ref|YP_002974091.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240856885|gb|ACS54552.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 598

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 100/495 (20%), Positives = 168/495 (33%), Gaps = 75/495 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E  R+A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAGRVAEE 51

Query: 80  NTPQLHAY-GPGGE-RWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
               L+      G  R D   V     +    +     G         F        + +
Sbjct: 52  ALFPLNYSGDQEGCTRHDDASVSTPKGFKEAYKAYREGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ AL    +      + PK+    +  T       
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAALLVHGSDEQKATYLPKMVDGTWSGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y +SG K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTKAVPQADGSYKISGQKIFISAGEHDLTGNIIHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L       G+ N +    +++K+G  +NAT  + +    GF
Sbjct: 217 IEGAPEGTKGISLFIVPKFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A  YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R +  I     A  A     A   D A   S+E           ++ PI
Sbjct: 337 ADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRASDEKERQTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTL 472
              G      LF  +
Sbjct: 457 ALNGGRAAMALFKEI 471


>gi|319792925|ref|YP_004154565.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315595388|gb|ADU36454.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 596

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 86/464 (18%), Positives = 176/464 (37%), Gaps = 62/464 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLR 108
               E  G        +E AR    N   +      G+R        +V   P +     
Sbjct: 26  LPGFEDAGLETAQAVLEECARF---NQDVVAPLNIEGDRNPSSFKGGEVTTTPGFKDAFA 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-- 166
           + +  G         F      +   I AA   ++        + P ++  ++ AL+T  
Sbjct: 83  QYVSGGWQGLQHPADFGGQGLPK--TIGAACGEMLNSANMSFALCPLLSDGAIEALLTAG 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  +   +  K+ S ++  T             + LTE + G+D+A + S+ +   DG Y
Sbjct: 141 SDELKAVYLEKLVSGQWTGT-------------MNLTEPQAGSDLAMVRSRAEPQPDGTY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGL 270
            + G K F++    D       ++LA+V G       +  F+VP+ +          N +
Sbjct: 188 KVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFMVGKDGALGERNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G +++ T  L++ +     G+L+G  N     +  M         +  ++ 
Sbjct: 248 HCVSIEHKMGIKASPTAVLQYGDNGGAVGYLVGQENRGLEYMFIMMNSARYAVGMQGIAI 307

Query: 328 MRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              +   A+ YA+ R  S            +I  P +KR +  +        A++   A 
Sbjct: 308 AERAYQHAVAYAKDRVQSRPVDGSINASAPIIHHPDVKRMLMTMRAYTEGCRAMASVAAA 367

Query: 379 SF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++       +A +R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+
Sbjct: 368 AYDAAHHHPDADARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ 474
           +YR++   +I  G+       L        G    + + + +E+
Sbjct: 428 YYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEK 471


>gi|169632984|ref|YP_001706720.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii SDF]
 gi|169151776|emb|CAP00595.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii]
          Length = 381

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 134/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LVDTYLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + R+  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAVGAIRGAIDLATAYVKERYAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|296164098|ref|ZP_06846717.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295900538|gb|EFG79925.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 399

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/369 (20%), Positives = 140/369 (37%), Gaps = 24/369 (6%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P    L R++   GL    +  +             A    L+ +       
Sbjct: 50  DWEEAGEIP--RELHRKAADVGLLGVGFPENVGGSGGD------AIDSALVTEAILACGG 101

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S  V +A     +  P +  + +  +      PT         +   L +TE   G+D+A
Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIDHYVRPTL-----AGDMIGSLAVTEPGAGSDVA 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D    G   
Sbjct: 157 NLRTRAVRDGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKGTPGFKV 215

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R  +K+G R + T EL F +       L+G  N     +        L  A+ + +   
Sbjct: 216 DRRLDKMGWRCSDTAELSFFDVRVPAANLVGAENGGFLQIMQQFQSERLGIAVQAYATAE 275

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  +AR R   G  L  + V++  +A++A  +  A A +  +   +   +    E
Sbjct: 276 RALKLAKGWARERQTFGKPLTARQVIRHKLAEMARQVDVARAYTRAVMQRWLAGEDVVTE 335

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            + A+  A     +       V+ EA++  GG GY+ E  + RHYR+     I  G+   
Sbjct: 336 VSMAKNTAVYACDY-------VVNEAVQIFGGMGYMRESEVERHYRDCRILGIGGGTNEI 388

Query: 450 MVLDVLNLL 458
           M   +   +
Sbjct: 389 MNEIIAKRI 397


>gi|226361793|ref|YP_002779571.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240278|dbj|BAH50626.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 380

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 125/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAWH-------ALLRRSIHDGLHCSIWDRSFEPVVRKQ--AHKIRAARLYLMAQLE 147
           V  H  W        AL   +   GL        +     +    H I    +       
Sbjct: 25  VPHHEQWENESCLDPALFTEAGKQGLLGFPVPEEYGGPGVEDFRYHAIVVDEVNRAGAAA 84

Query: 148 AGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           AG   S         +  MTTP     W P   + E               +G+ +TE  
Sbjct: 85  AGIAFSLQNDVVLPYLTDMTTPEQKARWLPGTVTGE-------------TILGIAMTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+  I +   +  D      G K F+S+  +    ++A          +  L+ +  
Sbjct: 132 TGSDLTGIRTTAVRDGDHYVVNGG-KTFISNGQNGTLFVVAVRTAPDKHKGLSLLVVESD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG  +  T EL F++       LLG+       +        L  ++ 
Sbjct: 191 TPGFSRGRNLEKIGLHAQDTSELTFTDMRVPVANLLGEEGQGFYQLVHNLPQERLSLSVG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     L + + Y + R+  G  +      +  +A++A ++  A              
Sbjct: 251 AVAAAEGVLEQTLAYVKERNAFGQPIAGFQNTQFVLAELATELDLARTYLDDCIRQHVRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  AA  +        W  ++   V    ++  GG GY+ E ++AR + ++   +I 
Sbjct: 311 EPTAARAARLKW-------WTTELQVRVADRCLQLHGGYGYMREYAVARAFVDARIQTIY 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   V   L
Sbjct: 364 GGTTEIMKTIVAKDL 378


>gi|158522193|ref|YP_001530063.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511019|gb|ABW67986.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 380

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 133/357 (37%), Gaps = 25/357 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVAL 164
           R+    G+    +  ++          + A      A ++        + +      +  
Sbjct: 43  RKMGEFGILGLHFPEAYGGQGADVITTVLAGEAMGEAGVDGGLTLSYGAHTFLCTDTIFA 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K + PK+ S E+                +GLTE   G+D+A++ +   K  D 
Sbjct: 103 HGTEAQRKKYLPKLNSGEW-------------VGCMGLTEPDAGSDVASLKTTAVKKGDT 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  + P++D  ++ A+ +       +   + +    G    +   K+G R++
Sbjct: 150 YVLNGSKMFITNGPIADVALVYAKTDPEKRHEGISAFIVEKGTPGFSTGQPLKKMGCRTS 209

Query: 285 ATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARR 341
            T EL FS+        +     G +  M+ + +  SA+++  V G +  L     YA +
Sbjct: 210 PTSELFFSDCEIPAENLVGKEGNGFLMAMQTVEWDRSALLAPMVGGTKYILDRCAEYASK 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      K  +A++ +   +A  L +R+A   ++            + A + K
Sbjct: 270 RVQFGKAIGQFQATKHKLANMRIFYESAKLLVYRVAWHKNQGNP------LNHLSAAMAK 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    +   + +A+   GG GY  E ++   +R++    +  G+ +   + +  L+
Sbjct: 324 LFVGDWSLGPVNDALLLHGGYGYCHEYAMECAFRDNRLAPLGGGTSDIQKMIISRLM 380


>gi|225629546|ref|ZP_03787579.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|225616042|gb|EEH13091.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
          Length = 381

 Score =  255 bits (652), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 124/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 40  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 100 ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 147 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 205

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 206 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERLIEESVGFA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 266 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 320 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 379

Query: 460 K 460
           +
Sbjct: 380 R 380


>gi|254462842|ref|ZP_05076258.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206679431|gb|EDZ43918.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 379

 Score =  255 bits (652), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 127/358 (35%), Gaps = 27/358 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              + +   GL C      +  V     H+         A L +      S   A  +  
Sbjct: 40  ETWQEAGALGLLCPSIPEEYGGVGGDFGHEAVILMEGSRANLASWGHGIHSGIVAHYILA 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    K   PK+ S E             +   L +TE  GG+D+ AI ++  K  + 
Sbjct: 100 CGTENQKKRLLPKMISGE-------------LVGALAMTEPSGGSDVQAIKTRAIKEGN- 145

Query: 225 IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNR 282
            Y L+G K F+++      I + A+     G       +LE     G    R  +KIG  
Sbjct: 146 SYKLNGQKTFITNGQHANLILVAAKTNPAEGSKGTSLVILETEGAEGFARGRNLDKIGAH 205

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +  T EL F N        L G+ N+    +        L     +V  M  ++A  I Y
Sbjct: 206 AADTSELFFDNVDIPAENILGGEENLGFYQMMQQLPQERLIIGCGAVGAMEGAVARTIEY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   GG ++     +  +A+       A A         DE  S   +       A 
Sbjct: 266 CKERQAFGGPIMQFQNTRFKLAECQTKTTVARAF-------LDECISEHLKGELTVEKAA 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + KYW  +    V+ E ++  GG G+++E ++A  + ++    I  G+   M   +  
Sbjct: 319 MAKYWLTETQGEVLDECLQLHGGYGFMQEYAVAEMWTDARVQRIYGGTNEIMKELISR 376


>gi|226362565|ref|YP_002780343.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241050|dbj|BAH51398.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 135/367 (36%), Gaps = 30/367 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       F           +  +      +     M     
Sbjct: 35  EYPEKWIEQMK---QIGIYGLAVPEEFGGSPVSMPCYAQVTQELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T    + + PK+ + E   T             + LTE  GG+D+ A+++ 
Sbjct: 92  VAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDLQAMSTT 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +   D +       W  ++  S    +L + + +       +  +L +  P GL   R 
Sbjct: 139 AKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIVLVEHGP-GLTVSRD 197

Query: 276 KNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             K+G +   T EL F N        L G      G +        +  A  ++     +
Sbjct: 198 LPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVACRALGVATAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D       EA 
Sbjct: 258 LEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDSGDRCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLYASEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLL 458
             +++ L
Sbjct: 371 NVIVSQL 377


>gi|253700710|ref|YP_003021899.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251775560|gb|ACT18141.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 592

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 83/458 (18%), Positives = 164/458 (35%), Gaps = 37/458 (8%)

Query: 95  DKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +++E     H   L++R    GL        +  +   +A  + AA     +   +    
Sbjct: 51  EEIEHQQFEHVVHLMKRCGELGLLMIDVPEEYGGLELDKATSMLAAEKISGSGSFSVAYS 110

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +      +    T    K +   + + E+                  LTE   G+D  
Sbjct: 111 AHTGIGTLPLVYYGTEEQKKKYLENLVTGEW-------------IAAYCLTEPDSGSDAL 157

Query: 213 AITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +     +DG  Y L+G K F ++  ++  + + A+V+           L +    G+
Sbjct: 158 GAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEH----FTAFLVERGFEGV 213

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                + K+G + ++T ++   N    +   LG++        ++  +            
Sbjct: 214 SVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGEIGKGHKIAFNVLNVGRFKLGAAVTGA 273

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-- 385
            + +LA+ I YA  R   G  +     +K  IAD+   + AA ++ +RLA   D+  +  
Sbjct: 274 AKGALADGIRYANLRKQFGRTIGSFGAIKEKIADMTAALFAAESMVYRLAGLIDQRLATI 333

Query: 386 ----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                              +   + K +C ++   V  E ++  GG G+++E    R+YR
Sbjct: 334 PRDTPNYYDVYQRAIEEYAMECAVAKVFCSEVLAFVADEVVQIHGGYGFVQEYPAERYYR 393

Query: 436 ESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +   N I  G+     L +   LL +       L     +   S        L DS+   
Sbjct: 394 DERINRIFEGTNEINRLLIPGTLLARAMKGEIPLQQEALKAFESLMTPSFEELDDSVPFA 453

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
            E   L       + +A SAA  ++AG+ +  +V L  
Sbjct: 454 AEKALLVGLKQAFLVVAGSAAQKFQAGIKEEQEVLLAA 491


>gi|169795335|ref|YP_001713128.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii AYE]
 gi|184158797|ref|YP_001847136.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213158679|ref|YP_002319977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482869|ref|YP_002325072.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239502893|ref|ZP_04662203.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|260554448|ref|ZP_05826669.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|169148262|emb|CAM86127.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           baumannii AYE]
 gi|183210391|gb|ACC57789.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057839|gb|ACJ42741.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987579|gb|ACJ57878.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|260410990|gb|EEX04287.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|322507390|gb|ADX02844.1| Putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           1656-2]
 gi|323518712|gb|ADX93093.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 381

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 134/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|118465554|ref|YP_881791.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166841|gb|ABK67738.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + W P I S E             + + + +TE   G+D+A I +   +  D  
Sbjct: 103 ANDEQKERWLPGIVSGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++ + +   G      L+ +    G    R   K+G    
Sbjct: 149 WIINGAKTFISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQ 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R +  + + YA+ 
Sbjct: 209 DTAELAFENVRVPSANLLGKEGRGFYHLMHNLPSERLSIAISAIAGARETWRQTLQYAKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R   +  + +  + EA+ A+       
Sbjct: 269 RKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLRAVVDGELTAVEASKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            WC + A  VI   ++  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 323 -WCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIMKDIIGRDL 378


>gi|322419624|ref|YP_004198847.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320126011|gb|ADW13571.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 592

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 92/471 (19%), Positives = 171/471 (36%), Gaps = 37/471 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL+R    GL        +  +   +A  + AA     +   +    + S      +   
Sbjct: 64  LLKRCGELGLLMIDVPEEYGGLELDKATSMLAAEKISGSGSFSVAYAAHSGIGTLPLVYY 123

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      +  K+ S E+                  LTE   G+D     +     +DG 
Sbjct: 124 GTKDQKARYLDKLTSGEW-------------VAAYCLTEPDSGSDALGAKASAILSADGS 170

Query: 226 -YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F ++  +++ + + A+V+           L + +  G+     + K+G + 
Sbjct: 171 HYVLNGTKQFTTNGSIANLYTVFAKVDREH----FTAFLVERTMEGVSVGPEEQKLGIKG 226

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   N    +   LG++        ++  +             + +LA+ + YA 
Sbjct: 227 SSTTQVILDNVRVPVANVLGEIGKGHKIAFNVLNIGRFKLGAAVTGSAKFALADGVKYAV 286

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSE 388
            R   G  +     +K  +AD+A  I A+ +L +RLA   D+              +  +
Sbjct: 287 LRKQFGRPICSFGAIKEKLADMAAGIFASESLVYRLAGLIDDRLATIPKETPNYYDAYQK 346

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 +   I K +C +M   V  E ++  GG G+I+E    R+YR+   N I  G+  
Sbjct: 347 GIEEYAMECAIAKVFCSEMLADVADEVVQIHGGYGFIQEYPAERYYRDERINRIFEGTNE 406

Query: 449 AMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
              L +   LL +       L     + L +        L DS+    E   L+      
Sbjct: 407 INRLLIPGILLTRSLKGEIPLQREAMKALDALTTPSFGELDDSVPFAAEKALLSGLKQLF 466

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           + +A SAA  Y+A + D  +V L     D   +   +      A  I+  L
Sbjct: 467 LVVAGSAAQKYQAQIKDEQEVLLA--LADVVINIFGIESVVLRAEKILPRL 515


>gi|254523722|ref|ZP_05135777.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219721313|gb|EED39838.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 596

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/527 (16%), Positives = 174/527 (33%), Gaps = 70/527 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD----K 96
            L  ++   P             V+    +E  R +      L++     G   D    +
Sbjct: 14  ALHDVLKVEPLFARLGFTDATADVVDAVLEEAGRFSATVLAPLNSVGDEIGCVLDQATGE 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +     + +  G                    +    +   A L  G+    S 
Sbjct: 74  VTTPPGFKQAYDQFVDGGWTGLTASPELGGQGLPHTLGVPLNEMINAANLAWGNFPLLSH 133

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +        H+ +   +    +  T             + LTE   GTD+  + +
Sbjct: 134 GAIEALKQHGEAWQHEAFLKPLIEGRWTGT-------------MCLTEPHCGTDLGLLKT 180

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           + +  +DG Y ++G K F+++   D       ++LA++         +  F+ P+   D 
Sbjct: 181 KAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR 240

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G  N L    +++K+G + + T  + F    G+L+G  +     +  M     L  
Sbjct: 241 DGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQPHKGLQAMFTMMNTARLGV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
            +  +     +   A+ Y+R R  S               ++  P ++R +  +   +  
Sbjct: 301 GLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPADPILVHPDVRRMLLTVKSLVEG 360

Query: 369 ATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           +  L+   A   D A    + A           + PI+K    +        A++C GG 
Sbjct: 361 SRLLALHAATLIDVAHHAEDAAERERADTLVSFLTPISKACQTEWGIENTYNALQCFGGH 420

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GYI E  + +  R++   ++  G+     LD++                     G+  K 
Sbjct: 421 GYIREHGMEQLARDARITTLYEGTTGIQALDLIG-------------RKTASSQGAGLKL 467

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASS-AAA----LYRAGMND 524
           ++  +       + ++ LA F+    A A+   A     L RA  N 
Sbjct: 468 MLAEIEAFAKEHEGNEALAEFIGPLRAKAAEWGALTMDVLKRAAANP 514


>gi|118480096|ref|YP_897247.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|228930034|ref|ZP_04093044.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229124544|ref|ZP_04253729.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 95/8201]
 gi|229187251|ref|ZP_04314396.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BGSC 6E1]
 gi|118419321|gb|ABK87740.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam]
 gi|228596261|gb|EEK53936.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BGSC 6E1]
 gi|228658884|gb|EEL14539.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus 95/8201]
 gi|228829533|gb|EEM75160.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 608

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|27806205|ref|NP_776919.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
 gi|930358|gb|AAA74051.1| very-long-chain acyl-CoA dehydrogenase [Bos taurus]
          Length = 655

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/471 (18%), Positives = 171/471 (36%), Gaps = 56/471 (11%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALM 165
           ++     G            V        R   +  M  L     L +        + L 
Sbjct: 133 MQGLKELGAFGLQVPNELGGVGLCNTQYARLVEIVGMYDLGVGIVLGAHQSIGFKGILLF 192

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    + + PK+ S E                   LTE   G+D A+I S       G 
Sbjct: 193 GTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRSSAVPSPCGK 239

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K ++S+   +D F + A+              +   + + S  G+ +   + K
Sbjct: 240 YYTLNGSKIWISNGGLADIFTVFAKTPVTDTATGAVKEKITAFVVERSFGGVTHGPPEKK 299

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G +++ T E+ F           NV        K+ ++ L++    ++          +
Sbjct: 300 MGIKASNTAEVYFDGVRVPA---ENVLGEVGGGFKVAMHILNNGRFGMAAALAGTMKGII 356

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +       
Sbjct: 357 AKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD------ 410

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L
Sbjct: 411 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL 470

Query: 453 DVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSI-------------SLC 494
            V     ++KG  L   L + L+   G++G    +    LR                   
Sbjct: 471 FVALQGCMDKGKELSG-LGNALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIVHQEL 529

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                LA    E+ A    A  L +   + I + FL  R  D+    + M+
Sbjct: 530 SRSGELAVQALEQFATVVEAK-LIKHKKDIINEQFLLQRLADSAIDLYAMV 579


>gi|109896984|ref|YP_660239.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109699265|gb|ABG39185.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 586

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/526 (17%), Positives = 182/526 (34%), Gaps = 63/526 (11%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
            H  +D+ F LN+    +  +   +D     +     SV+  E   LG    S     L 
Sbjct: 5   THPLADAEFVLNE---LVDFDGLCADMGQEDINGELASVILAEAGKLG----SGVLAPLN 57

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           ++ +   P        G     V+    +    +  +  G         F        + 
Sbjct: 58  KVGDLQHP--SMIDKDGGP--GVQETAGFAKAYQEYVEGGWASLTGAEEFGGQNLP--NV 111

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           + +A   +         + P ++  ++  ++   +  + + + PK+ S E+  T      
Sbjct: 112 LGSAVNEVWHTSNMAFALCPLLSQGAIESISHHGSEHLQQSYLPKMLSGEWPGT------ 165

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLA 247
                  + LTE   GTD+AA+ ++     D  Y ++G K +++            ++LA
Sbjct: 166 -------MNLTEPDAGTDLAAVKTKAVPNDDH-YLITGQKIYITWGDHQMTDNIVHLVLA 217

Query: 248 Q-VEGRVGCFLVPRLLEDG---SPNGLCYQR-------LKNKIGNRSNATVELEFSN--- 293
           +  +   G   +   +        NG   +R       L++K+G   + T  + F +   
Sbjct: 218 RLPDAPAGVKGISLFIVPKFNLDENGAPAERNDAYCVSLEHKMGIHGSPTCVMSFGDNGG 277

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G+ +     +  M         +  ++    S   A+ YA+ R           
Sbjct: 278 AKGYLVGEAHKGLSYMFTMMNHARQGVGLQGLAISEASYQHALGYAKERLQGTNKDGSRF 337

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            ++  P ++R +  +     A  AL    A   D         A + +  PI K WC ++
Sbjct: 338 TIMKFPDVRRMLMQMKSSTEAMRALCLVAAAEIDRGN-----GARSELFTPIVKGWCTEL 392

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLF 465
           +  +     +  GG G+IEE   A+ YR++   +I  G+     LD++    L       
Sbjct: 393 SQELTYLGTQIHGGMGFIEETGSAQFYRDARILTIYEGTTGVQALDLVGRKTLVNKGEAL 452

Query: 466 EQLFSTLEQDLGS--SGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             L   +  DL    +     T+         E    AR     IA
Sbjct: 453 GALLDEIATDLAQFDAMGGQFTLAAQQCKTALECGVAARQWLLDIA 498


>gi|239820442|ref|YP_002947627.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239805295|gb|ACS22361.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 388

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 138/367 (37%), Gaps = 27/367 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H A   +  ++   GL C+     +        H+       + A  +       S   A
Sbjct: 42  HHADREIWTKAGAAGLLCASIPEEYGGGGGSFLHEAVICEEQMRAMAQGFSNNVHSGIVA 101

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T    + W P++ S E             +   + +TE   GTD+  I +Q +
Sbjct: 102 HYLLAYGTEAQKQRWLPRMASGE-------------LVAAIAMTEPGAGTDLQRIKTQAR 148

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKN 277
           +   G + +SG K F+++ M    + + A+ +   G   +  L+ +    +G     L +
Sbjct: 149 RDG-GHWRISGSKTFITNGMHAGLVCVAARTDAAAGGKGISLLMVETEGTSGFRRGPLLD 207

Query: 278 KIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           K+G ++  T EL F +        L G+       +        L  A+ +V+ M+ ++ 
Sbjct: 208 KMGQKTLDTTELFFDDVRVPADHLLGGEEGRGFAQLMQQLPRERLLIAVGAVATMQRAIG 267

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + + Y R R V G  L+     +  +A+       A A         D+  +R  +    
Sbjct: 268 DTLGYVRDRQVFGEPLLKMQNTRFKLAECETQAQVARAFV-------DDCIARLMQGELD 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K+W       ++ E ++  GG G++ E  +AR Y +     I  G+   M   
Sbjct: 321 VPTAAMAKWWTTDACCRIVDECLQLHGGYGFMNEYPVARLYADVRVGRIYGGANEVMKEI 380

Query: 454 VLNLLEK 460
           +   +EK
Sbjct: 381 IARAMEK 387


>gi|15600380|ref|NP_253874.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9951491|gb|AAG08572.1|AE004931_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 596

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 169/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVCGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +   +L     
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAVASEALQGRAVLAPLAE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|226314482|ref|YP_002774378.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
 gi|226097432|dbj|BAH45874.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599]
          Length = 592

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/436 (18%), Positives = 161/436 (36%), Gaps = 43/436 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+ +   GL        +E +   +         + +A+  A    +     +  +  
Sbjct: 65  RLLKEAGELGLLAGDVPEKYEGLGLDKVSTALVTEKFSLARGFALSYGAHVGIGSLPIVY 124

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + P + S                     LTE   G+D     +     +DG
Sbjct: 125 FGNEEQKQRYLPDLASG-------------KRIAAYCLTEPGSGSDALGAKTTATLSADG 171

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D FI+ A+++G          + + +  G+ +   + K+G +
Sbjct: 172 THYILNGEKQWITNAGFADVFIVYAKIDGEK----FTAFIVERTFPGVSFGPEEKKMGIK 227

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  +   +    +   L     G V    IL       A+ +V   + ++  A +YA
Sbjct: 228 CSSTRTVILQDVPVPVNNLLGEPGRGHVIAFNILNVGRYKLAVGAVGSSKKAVELATNYA 287

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----------EAKSRSE 388
           + R      + + P++K  +A++A+   AA +  +R    FD           +    ++
Sbjct: 288 KERKQFKTPIANFPLIKNKLANMAVKTYAAESSVYRTVGLFDTALTRLGEKADDGAEVAK 347

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A   I   I K +  ++    + E ++  GG G++ E  I   YR+S  N I  G+  
Sbjct: 348 AIADYAIECSINKVFATEVLDYCVDEGVQIHGGYGFMSEYEIENMYRDSRINRIFEGTNE 407

Query: 449 AMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
              + + + L     KG     Q  S+L+ DL S   + I             +     +
Sbjct: 408 INRMLIPDTLVKKAMKGELPLMQAASSLQADLMSYYPEEIE------DAPLAMEKHLINI 461

Query: 505 TEKIALASSAAALYRA 520
           T KI L  + +A+ + 
Sbjct: 462 TRKIILMVAGSAMMKY 477


>gi|120555311|ref|YP_959662.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325160|gb|ABM19475.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 379

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 142/407 (34%), Gaps = 42/407 (10%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
             +LE   + V     QE A       P    +   G+             L +++   G
Sbjct: 8   DADLEGFRDSVRKFLEQEAA-------PYHDQWEKDGQ---------VSRELWQKAGELG 51

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
             C +    +  V     +          A L        S   A  +    +    + +
Sbjct: 52  FLCPMLPEEYGGVGADFRYSAVIMEEISRAGLSGIGWGLHSDIVAPYILNYGSEEQKQKY 111

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ S E                 + +TE   G+D+  + +   +  D  Y L+G K F
Sbjct: 112 LPKMASGEM-------------ITAIAMTEPGAGSDLQGVKTTAIRQGDH-YILNGSKTF 157

Query: 235 LSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +++   +D  I++A+ + + G      LL + +  G    +  NK+G ++  T EL F +
Sbjct: 158 ITNGQLADLVIVVAKTDPKEGAKGTSLLLVETAWEGFEKGQNLNKVGMKAQDTSELFFQD 217

Query: 294 TFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                   L      G  + M+ L    L  A+ +V+    +    + Y + R   G  +
Sbjct: 218 VKVPADNLLGSMEGQGFFQLMQELPAERLQVALTAVAAAEAAWQWTLDYVKERKAFGKPV 277

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I     +  +A++  +I AA   + R      + K            A + K     +  
Sbjct: 278 IAFQNTRFKLAELKAEITAARVFTDRCLELHLDKK-------LDIPTAAMLKQHTTDLQC 330

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V+ E ++  GG GY+ E  IAR + +S    I  G+   M   V  
Sbjct: 331 KVMDECVQLHGGYGYMWEYPIARAWADSRVQRIYAGTNEIMKEIVAR 377


>gi|322503093|emb|CBZ38177.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 412

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 139/355 (39%), Gaps = 26/355 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDW 174
           +   +PVV K+A       +   A LE         +++    +    A+  T  V    
Sbjct: 54  EGKMDPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTL 113

Query: 175 APKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
              IF   + +       P           LTE   G+D  A+ ++ +K           
Sbjct: 114 VNNIFFNFANDAQRRKYLPKLAKDTVGCFCLTEAGSGSDAFALNTKAEKKGSKWVINGSK 173

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
            +  +   +  F+++A V+   G   +   + D S   G+   R +NK+G R+++T EL 
Sbjct: 174 LYITNGGWAGIFLVMATVDPSKGYKGITCFVVDSSETPGVSVVRTENKLGIRASSTAELR 233

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
             N       + NV     +  KI I  L+   + +    + +A+      + Y  +R  
Sbjct: 234 LENVEVP---EENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   M+   A+ A+++ AA  + +  +      +   ++AA A+  A +     
Sbjct: 291 FGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMAKYFASVV---- 346

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              A    + A+E  GG G++++  + R YR++   +I  G+    +  +  +++
Sbjct: 347 ---AEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGTSIIQLQTIAKMIK 398


>gi|300697298|ref|YP_003747959.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299074022|emb|CBJ53559.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum
           CFBP2957]
          Length = 385

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 131/355 (36%), Gaps = 26/355 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHK 172
           GL       ++  +    A +                +   +V   S  + +  T     
Sbjct: 48  GLFGLSIPEAYGGIGLSMAQECEVVYDLGHTSFAFRSVFGTNVGIGSQGILMDGTEAQKA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P+I S E             + I   LTE   G+D A++ ++     D        +
Sbjct: 108 VYLPRIASGE-------------LIISFALTEPDAGSDAASLQTRATPDGDHYVINGTKR 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++   
Sbjct: 155 FITNAPRAGAFTLMARTGGE-GAGGISAFIVPADTPGITLGKHDKKMGQRGTKTCDVMLD 213

Query: 293 NTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
           N        +      G    MK+   LD   + +S +   +A      A  YA+ R   
Sbjct: 214 NVRVSAANIIGGVAGQGFKTAMKV---LDRGRLHLSALACGMAHRLITDAAAYAKGRRQF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D  +++  +AD   ++ A  ++    A  +D AK    +     ++A  +K +C 
Sbjct: 271 GQPIADFQLIQAMLADSQAELYAGLSMVRDCARRYD-AKPAGRQDHEVSMLASCSKLFCT 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +M   V   A++  GG+GYI E  + R YR+     +  G+     L +   L +
Sbjct: 330 EMVGRVADRAVQIHGGAGYIAEYKVERFYRDVRLLRLYEGTTQIQQLIIAKHLLR 384


>gi|148554752|ref|YP_001262334.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499942|gb|ABQ68196.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 385

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/365 (21%), Positives = 139/365 (38%), Gaps = 26/365 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           + HP    +   +   GL C      +      + +          A       +  S  
Sbjct: 43  QCHPD-REVWLEAGKLGLLCVTIPEQYGGAGADRKYSTVLIEEQQRANAAGPGFVMHSEI 101

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A  +    T      W P++   E             V   L +TE RGG+D+ AI+++
Sbjct: 102 VAGYIERFGTEEQKAAWLPRMARGE-------------VIGSLAMTEPRGGSDLRAISTR 148

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                D  Y L+G K F+++  ++D  I+ A+ E   G   +   L +    G+      
Sbjct: 149 AMAFGDH-YILNGAKTFITNGYITDLIIVAAKTEQDDGTTGLSLFLVEADRAGVSKSMPL 207

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G ++    EL F +     G LLG        +        L  AI +V+G  V+L 
Sbjct: 208 DKVGQKAQDAAELFFDDVHVPKGNLLGRQGEGLHYLMQELAWERLMIAIRAVAGCEVALE 267

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y + R++ G  LID    +  +A+       A     +      + K  +E +A A
Sbjct: 268 TTVDYVKSRNMFGKSLIDFQNTRFKLAECKTKTQIARVYIDKCIELACDGKLDAEASAMA 327

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +        WC ++   V+ E ++  GG GY+ E  +AR + ++ A  I  G+   M   
Sbjct: 328 KW-------WCTELQNRVLDECVQFHGGYGYMLEYPVARAWTDARAQMIYGGTNEIMKEI 380

Query: 454 VLNLL 458
           +   L
Sbjct: 381 IARKL 385


>gi|21717402|dbj|BAC02933.1| acyl-CoA dehydrogenase B [Acinetobacter sp. M-1]
          Length = 599

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 89/484 (18%), Positives = 161/484 (33%), Gaps = 63/484 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHALLRRSIHDGLHCSI 119
             ++    +  A         L+      G  W D V   P  +    ++ I  G     
Sbjct: 36  RELVDQYLEAAADFCENELSPLNQVGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLS 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  F       +  I  + +   A    G     S  +   +    +      + P + 
Sbjct: 96  ADEEFGGQALPNSLGISISEMVGTANWSWGMYPGLSHGAVRTLEHHGSDEQKNTYLPNLV 155

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S  +  T             + LTE   G+D+  I S+ +  +DG Y +SG K F+S+  
Sbjct: 156 SGVWTGT-------------MCLTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGE 202

Query: 240 SDA-----FIMLAQVEGR-VGCFLVPRLLEDGSPNGL----------CYQRLKNKIGNRS 283
            D       I+LA++ G   G   +   +   S + L             + ++K+G   
Sbjct: 203 HDMAENIIHIVLARLPGAPKGTKGISLFIVPNSTSMLMVQLASVMQYVVVQFEHKMGIHG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + F    G+L+G  N     +        + +A+  +S    S   A+ YA+ R 
Sbjct: 263 NATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
                            +I  P ++  +           AL + LA   D  E     EE
Sbjct: 323 AMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEE 382

Query: 390 AAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A      + PI K +  +         ++  GG G+I E  + +  R++    +  G
Sbjct: 383 RKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEG 442

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     LD+L                + Q  G+  K    I+   +   K++  +  F+ 
Sbjct: 443 TTEIQALDLLG-------------RKVLQTQGAMLKDFTKIIHKFVEANKDNAAMQEFIA 489

Query: 506 EKIA 509
              A
Sbjct: 490 PLAA 493


>gi|293603106|ref|ZP_06685540.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818500|gb|EFF77547.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 382

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 125/355 (35%), Gaps = 29/355 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        F  +      ++R    L   +        +     +  + L  T     
Sbjct: 48  GLFGLSISPDFGGLGLTMEEEVRVVFELGQTSPAFRSLAGTNIGIGSQAIVLAGTDEQRA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E             +     LTE   G+D  A+    ++  D        +
Sbjct: 108 QYLPKLASGE-------------LIGSFALTEPDAGSDAMALRLSAERDGDSYVLNGTKR 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  ++P++  F ++A+         +   L +    GL   +   K+G     T ++ F 
Sbjct: 155 YITNAPIAGLFSVMARTAPERRANSISCFLVEAGTPGLIIGKPDKKMGQAGALTSDVVFD 214

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
           N        L          +  +  LD   + +S + V +AE     A+ YA  R   G
Sbjct: 215 NCRVPASALL--GGEEGNGFRTSMRVLDKGRLHISALCVGIAERLLSDAVKYALERKQFG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  IAD   ++ AA  +    A   D  ++ + +AA         K +  +
Sbjct: 273 QPIAEFQLIQAMIADSQAELYAARCMVLDAARMRDRGENTTMQAA-------CCKLYSTE 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           M   V   A++  GG+GY+ E ++ R YR+     I  G+     L +     K 
Sbjct: 326 MVGRVADRAVQIHGGAGYMSEYAVERFYRDVRLFRIFEGTSQIQQLVIARETIKA 380


>gi|308388188|pdb|3OWA|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388189|pdb|3OWA|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388190|pdb|3OWA|C Chain C, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 gi|308388191|pdb|3OWA|D Chain D, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
          Length = 597

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 155/439 (35%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 50  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 101

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 102 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 148

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 149 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K G + ++T  L   +        L  +  G +    I
Sbjct: 207 --FSAFIVEKDYAGVSTSPEEKKXGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 264

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A+ A    AA + 
Sbjct: 265 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANXAAKTYAAESS 324

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 325 VYRTVGLFESRXSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 384

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G+  E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 385 GYGFXAEYEIERXYRDSRINRIFEGTNEINRLIVPGTFLRKAXKGELPLLQKAQKLQEEL 444

Query: 469 FSTLEQDLGSSGKKVITIL 487
                +++G     +   L
Sbjct: 445 XXXXPEEVGDEPLALQKYL 463


>gi|212551027|ref|YP_002309344.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549265|dbj|BAG83933.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 569

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 92/460 (20%), Positives = 168/460 (36%), Gaps = 58/460 (12%)

Query: 89  PGGERWDK---------VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P  E  D+         V++ P     L+     GL      R F  +       I A+ 
Sbjct: 68  PNAEDVDRLGGKLKNKRVQYAPGTIQNLQAITQAGLMGLSMPRIFGGLNFPMVTFIMASD 127

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +   A     +L +        +      + HK + P++ + E               + 
Sbjct: 128 IAARADAGFCNLWA-LQDCIITLYEFGNEQQHKQFIPRVCAGE--------------TLS 172

Query: 200 LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFL 257
           + LTE   G+D+ A+  +         + L+G K F+++  +D  ++LA+ E G      
Sbjct: 173 MDLTEPDAGSDLQAVALKATYDEKKDCWRLNGVKRFITNGDADIHLVLARSEEGTKDGRG 232

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILI 316
           +   + D    G+  +R++NK+G + + T EL + N    L G         V  +    
Sbjct: 233 LSMFIYDKKDGGVDVRRIENKMGIKGSPTCELTYKNAKAQLCGKRKYGLIKYVMSLMNGA 292

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L     +      +  EAI YAR R   G  +I+ P +   I++I   + A+ ++ +  
Sbjct: 293 RLGIMAQATGLSEAAYREAIVYARERKQFGKTIIEFPAVYEMISNIKAKLYASRSILYET 352

Query: 377 ANSFDE-------AKSRSEEAA----------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           A   D        AK R    A           +    P+ K    + A     + ++  
Sbjct: 353 ARFVDIYKILEEIAKERPLNDAEKLELKKYKRLSDAFTPLGKAMNTEYANQNTYDCIQIH 412

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE-------QLFSTL 472
           GGSG++++ +  R YR++   SI  G+    V+  +  +   T L +       QL   L
Sbjct: 413 GGSGFMKDYTCERLYRDARITSIYEGTTQLQVVAAIRHVLTDTYLTQIEEYQAIQLKPEL 472

Query: 473 EQDLGSSGKKVITILRDSISL------CKEDKGLARFLTE 506
             +L     K + I +  +         +     AR L E
Sbjct: 473 -NNLKQRLSKSVEIYKQLVKKVASTKNAELIDFHARRLVE 511


>gi|261415356|ref|YP_003249039.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371812|gb|ACX74557.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302325383|gb|ADL24584.1| acyl-CoA dehydrogenase family protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 570

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/480 (19%), Positives = 169/480 (35%), Gaps = 49/480 (10%)

Query: 76  MANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            AN   P        G   +  +V +    +  L  +   GL+     R F  +      
Sbjct: 63  TANTVFPNSEDVDAEGPHCENGRVRYASKTYENLEATRKAGLNGVTMPRRFGGLNFPITA 122

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                 +   A     ++ S        +           + P+I + E           
Sbjct: 123 YTAINEMIASADAGFENIWS-LQDCIETLYEFGDEDQRSRFIPRICAGE----------- 170

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251
               + + LTE   G+D+  +  +     +D  + L+G K F+++  SD  ++LA+ E G
Sbjct: 171 ---TMSMDLTEPDAGSDLQRVMLKATYSEADKCWYLNGVKRFITNGDSDIHLVLARSEEG 227

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVE 310
                 +   + D    G+  +R++NK+G   + T EL + N    L G         V 
Sbjct: 228 THDGRGLSMFIYDKRDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGRRKFGLIKYVM 287

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +     L  A  SV   +++  EA+ YA+ R   G  +++ P +   I++I   + A  
Sbjct: 288 ALMNGARLGIAAQSVGISQMAYNEALAYAKDRKQFGQAIVNFPAVYEMISNIKARLDAGR 347

Query: 371 ALSFRLANSF-----------------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           AL ++ A                    DE K        A    P+ K    + A     
Sbjct: 348 ALLYQTARYVDIYKCLEDIERTRKLTDDEKKELKLYQKLASACTPLAKGMNSEYANQNSY 407

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFEQLFSTL 472
           + ++  GGSGY+ E +  R YR++   SI  G+     +  L  +  G+  L  +    +
Sbjct: 408 DCIQVHGGSGYMLEYACQRLYRDARITSIYEGTTQLQTVAALPHITTGSYGLMLEELEAM 467

Query: 473 E-----QDLGSSGKKVITILRDSISLCKEDK------GLARFLTEKIALASSAAALYRAG 521
           +     + L +  K +     ++I   K  +        +R L E  A       L R  
Sbjct: 468 DVRPEYESLKARAKAMDEKYNEAIEYVKSVENNEFTDLCSRHLYELAANCVMTQLLLRDA 527


>gi|111224259|ref|YP_715053.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111151791|emb|CAJ63511.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 380

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 132/386 (34%), Gaps = 33/386 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKI 135
           A   TP    +   G   D+  F         ++   G+        F    VR      
Sbjct: 22  AREITPYHAGWEADGI-VDRAVF--------AKAAKHGVIGFNVAEEFGGGGVRDFRFNA 72

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             A     A +     +  +    S ++ +        W P   S E             
Sbjct: 73  VVAEELAAAFVTGPGFLLHNDVVGSYLSRLPDDEQKARWLPGFASGE------------- 119

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
               + +TE   G+D+  I +Q  +  D         +  +   SD  I++A+ +   G 
Sbjct: 120 AIWAIAMTEPGAGSDLQGIRTQAVRDGDDWLVSGAKTFITNGIHSDYVIVVARTDPAAGS 179

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI 314
             +  L+ +    G    R  +KIG  +  T EL F          L     G V  M+ 
Sbjct: 180 RGISLLVVERDMPGFSRGRNLDKIGLHAQDTAELFFDAVRVPARNVLGRLGGGFVHLMEN 239

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    L  AI +V+G R      + Y + R   G  +      +  +A++A +I  A   
Sbjct: 240 LPEERLSIAISAVAGARAVFDSTLEYTKTRTAFGQPIGGFQHSRFLLAELATEIDIAQVY 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R   +  E K  + +A+ A+        W  ++   V+   ++  GG GY+ E  +A+
Sbjct: 300 IDRCLKASFEEKLTTVDASKAKW-------WATELQQKVVDRCLQLHGGYGYMTEYPVAK 352

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            + ++   +I  G+   M   +   L
Sbjct: 353 AFTDARIQTIYGGTTEIMKEIIGRSL 378


>gi|254476967|ref|ZP_05090353.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
 gi|214031210|gb|EEB72045.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11]
          Length = 568

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/491 (18%), Positives = 180/491 (36%), Gaps = 38/491 (7%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVE 98
           LL  +I               + V++    E  +  +     L+      P       + 
Sbjct: 13  LLNHIIGYSEISATDRFSEASDDVVTAILTEAGKFCDEVMAPLNRGGDLQPAYLENGVLR 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    +     G         F  +            +   A L        S   
Sbjct: 73  TSPGYAEGWQAISEGGWIGMSAAEDFGGMGLPMTLTTAVNEMMSGACLSLQLAPLMSQGQ 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +  + + + PK+ S E+  T             + LTE + G+D+ A++S+ 
Sbjct: 133 IEALEHHASDALKELYLPKLISGEWSGT-------------MNLTEPQAGSDVGALSSKA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED--- 264
           + + DG Y +SG K ++S   +D       ++LA++         +  FLVP+ L D   
Sbjct: 180 EPLDDGTYAISGQKIYISWGDNDFTQNVCHLVLARLPDAVPGTKGISLFLVPKFLPDAEG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N L    L++K+G   + T  +++    G+++G        +  M     L    
Sbjct: 240 NPGKANSLKVVSLEHKMGLHGSPTCVMQYDGAIGWMVGKPGGGLAAMFTMMNNARLGVGG 299

Query: 323 MSVSGMRVSLAEAIHYARRRHVSG---GILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             V     +  +A+ YA  R       G ++D   ++R + ++  D+ AA A+    + +
Sbjct: 300 QGVGVAGAAYQKALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQA 359

Query: 380 FDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            D   A    + AA A  + PI K +  +    V    ++  GG G+IEE   A+ YR+ 
Sbjct: 360 IDMQTATGAQDWAARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDV 419

Query: 438 PANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              +I  G+     +D++   +  G ++  +L   +E+    +      +       C+ 
Sbjct: 420 RVTAIYEGTNGIQAMDLVGRKMMDGGDMAHRLIDEIEEQAERARTTHPNMAEAVWQACES 479

Query: 497 DKGLARFLTEK 507
            +    +LT +
Sbjct: 480 LREATEWLTAQ 490


>gi|118471487|ref|YP_886355.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172774|gb|ABK73670.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 384

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 126/366 (34%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G+        +          ++ A       +     M      + ++ L
Sbjct: 38  ELIETMKEIGIFGLAIPEPYGFGAVSMPCYVQVAEELARGWMSLAGAMGGHTVVSKLLLL 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++ + E   T             + LTE  GG+D+ A+ +  ++  D 
Sbjct: 98  FGTEEQKQKYLPRMATGELRAT-------------MALTEPGGGSDLQAMRTVARRDGDD 144

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  SD   ++ + +         V  LL +  P G    R   K+G +
Sbjct: 145 YVINGSKTWISNARRSDLVALMCKTDPDAQPAHKGVSILLVEKVP-GFDVSRDLPKLGYK 203

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F++        L  D       +     +  L  A  +    R +  +A+ Y
Sbjct: 204 GVESCELNFTDARVPVSSLLGDDEGRGFAQMMKGLEVGRLQVAARATGVARAAFEDALRY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  +     +   +AD+   + AA +L    A  FD  +    EA  A     
Sbjct: 264 SQERESFGKPIWQHQSVGNMLADMGTKLYAARSLLLSAAEKFDAGQRCDMEAGMA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +  +A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 319 --KLFASETAMQIALDAVRVHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAKQL 376

Query: 459 EKGTNL 464
                L
Sbjct: 377 VARGGL 382


>gi|254819967|ref|ZP_05224968.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 380

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 129/354 (36%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   GL    +D  +  + V+        +    +       L   +      +  +TT 
Sbjct: 46  AGEHGLIGWEFDEKYGGLGVKDFRFNQIVSEEMFLTGSVGIGLGVQNDILVPYLNDLTTE 105

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK  S EY                + ++E   G+D+A I +  +   D     
Sbjct: 106 EQKERWLPKFVSGEY-------------IGSIAMSEPAAGSDLAGIKTTARDEGDHWVV- 151

Query: 229 SGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+S+ +    ++ A + +       +  L+ +    G    R  +KIG  S  T 
Sbjct: 152 NGQKTFISNGLLSKLVLTAVKTDPSARHKGISLLMIEDGMEGFTRGRKLDKIGQYSADTA 211

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F +       L+G+LN     +        +  A  ++   R +L     YA  R  
Sbjct: 212 ELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACYALPAARRALDLTKAYALERTA 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    V +  +A++   + AA     +   S ++     ++AA  +        W 
Sbjct: 272 FGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDAAGLKW-------WT 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M   +   +
Sbjct: 325 SEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIMKDLMGRAM 378


>gi|55978205|ref|YP_145261.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|55773378|dbj|BAD71818.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 378

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 141/358 (39%), Gaps = 37/358 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTT 167
           + +    +   F P     A     A L L+ ++     +   ++    + L       T
Sbjct: 39  EEMAELGFLGVFVPEALGGAGLDFFAYLALLEEMGGWASLRSVLSVQQSLVLTPLLAYGT 98

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + P++  RE             +     LTE   G+D A++ ++  +  D  Y 
Sbjct: 99  EAQKARYVPRLARRE-------------ILGAFALTEPEAGSDAASLKTRAHREGD-FYV 144

Query: 228 LSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L G K F+S   +++ F++ A+ +   G   +   L +   +G+    LK K+G R+  T
Sbjct: 145 LEGQKTFISHANVAEVFLVFAKTDPEKGAKGITCFLVERG-DGVKTSPLKGKLGLRAADT 203

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYAR 340
             +              V     E  +I +       +  A  +V  M+ +L  ++ Y R
Sbjct: 204 GMVFLDGVRVPKD---RVLGKEGEGFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYTR 260

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  +A + LD+ AA  L++R A    + +  + EA+ A       
Sbjct: 261 ERKQFGKPIAQFQLVQEHLAAMKLDLEAARLLTYRAAWKKVKGEPYTLEASLA------- 313

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V   A++  GG G+ EE  +AR YR++   ++  G+     L +   L
Sbjct: 314 KLFASEAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEVQKLIIGAHL 371


>gi|72160472|ref|YP_288129.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71914204|gb|AAZ54106.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 391

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 140/426 (32%), Gaps = 47/426 (11%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           ++    PS    +L  L   V S         A                  + E  P   
Sbjct: 2   SVTRLMPSQETADLVELVREVASRELAPHVAEAE-----------------ETERFP--R 42

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              R     G+    +   +    +     +             G  +S  V S   +A+
Sbjct: 43  EAFRTLGKLGVLGLPYPEEYGGGGQPYEAYLNILEEIGAVWASVGVGVSVHVLSCYALAV 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P + S               +     L+E   G+D AA+T++ ++  D 
Sbjct: 103 YGTEAQRQRWLPDLLSG-------------DLLGAYCLSEPHAGSDPAAMTTRARRDGDH 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W      +D + ++A+         +   L      GL   R + K+G  ++
Sbjct: 150 YILDGVKAWITHGGQADFYTVMARTSDDRS-RGISCFLVPADTPGLSADRPERKMGLTAS 208

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA 339
            T  L F          +      +     L  LD+  + ++ +   LA+A     + YA
Sbjct: 209 HTTMLRFDGVRIPADQRIGAEGQGLS--IALSSLDAGRLGIAAVATGLAQAALDTAVDYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R   G  +I+   +   +AD+A  +  A A + R A   D     S+E       A I
Sbjct: 267 RQREAFGKPIIEHQGLAFLLADMAAAVETARAATLRAARLKDSGLPYSKE-------ASI 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K      A  V  +A++ +GG GY  +  + R+ RE+    I  G+     L +   L 
Sbjct: 320 AKLIATDNAMRVTTDAVQVLGGYGYTRDFPVERYMREAKVMQIFEGTNQIQRLVIGRHLA 379

Query: 460 KGTNLF 465
           +     
Sbjct: 380 RDATAH 385


>gi|218894289|ref|YP_002443159.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|218774518|emb|CAW30335.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 596

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 168/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLASCCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +    L     
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAVASEALQGRAALAPLAE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|119385946|ref|YP_917001.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376541|gb|ABL71305.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 584

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 97/599 (16%), Positives = 196/599 (32%), Gaps = 93/599 (15%)

Query: 29  PLFIGMNA-----YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P            +  D  + AL A+  +     L +L         +E  +        
Sbjct: 6   PPLEEYGFLLKEVFDFDQTMAALPAHDGTDAELALSVL---------EEAGKFCTGILEP 56

Query: 84  LHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           L+      G R +  +V             +  G      +  F      +  +I    +
Sbjct: 57  LNRSGDEEGCRLENGEVVTPRGTKEAYCAFVEAGWGALSGELEFGGQGLPRVVQILLDEM 116

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                L  G     +  +A  +A   +  + + + P++ S E+             +  +
Sbjct: 117 LSSTHLSFGLFTGLTRGAAEALASHASDELRRTYLPRLISSEW-------------SGVM 163

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG---- 251
            LTE   GTD+  +TS+ + + DG + ++G K F+SS   D       ++LA++      
Sbjct: 164 ALTEASAGTDLGLLTSRAEPVGDGSFRITGTKIFISSGDHDFGGNVIHLVLARLPDAPKG 223

Query: 252 --RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              +  FLVP+ L +     G  N +    L++K+G  +  T  + +    G+L+G+   
Sbjct: 224 VKGISLFLVPKFLVNPDGTLGERNAMAVGSLEHKMGIHAQPTCVMNYDGAIGWLVGEEGR 283

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMK 356
               +  M     L   I  +    ++  +AI YA  R              +I+ P ++
Sbjct: 284 GLNAMFTMMNAERLFVGIQGLGISEIANQKAIAYAHDRKQGRSLDGTRSPVPIIEHPDVR 343

Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           + +        A+  L+   A   D      +A+ R++      ++ P+ K         
Sbjct: 344 KLLLTGRSLTDASRGLAVWTAMQMDIAARHPDAQVRADAGDLVALLTPVIKAAFTDFGFE 403

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG------- 461
               + + +GG GYI E  + +  R+     I  G+     +D++   +  KG       
Sbjct: 404 TAVASQQVLGGHGYIREWGMEQFVRDVRIAQIYEGTNGVQAMDLVTRKVTAKGGTVAARF 463

Query: 462 ------------TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
                        N   +L     +   +  ++V   +             A       A
Sbjct: 464 FAAIRADLSTPAGNSHSRLIREATEAALARLERVTAEVLAGQGNPATAGAAATDYLRLFA 523

Query: 510 LASSA---AALYRAGMNDIADV---------FLENRFLDNCHSTHCMLHGRFNAAHIID 556
           L +     A +  A   ++++          +   R L        ML    +    +D
Sbjct: 524 LTACGWMWARMVGAADPEVSETQRRRVGLANYFAARVLPQTIGLENMLLAGPDTLMAVD 582


>gi|301106835|ref|XP_002902500.1| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Phytophthora infestans T30-4]
 gi|262098374|gb|EEY56426.1| acyl-CoA dehydrogenase family member 9, mitochondrial precursor
           [Phytophthora infestans T30-4]
          Length = 610

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/462 (18%), Positives = 159/462 (34%), Gaps = 51/462 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL         E +        R         L A  +M+        + L       
Sbjct: 95  ELGLFGLQIPEDLEGLGLSNTGYARVCEEITDGSL-AVTVMAHQSIGLKGILLNGNEAQK 153

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLS 229
             + PK+ + E+                  LTE   G+D  +I ++     DG       
Sbjct: 154 AKYLPKLATGEH-------------VAAFALTEPSSGSDAGSIKTRATISEDGKHYVLNG 200

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           G  W  +   ++   + AQ E   G   V   + + +  G+     ++K+G R + T ++
Sbjct: 201 GKIWISNGGWAEIMTVFAQTEVD-GKDKVTAFIVERAFGGVTSGPPEDKLGIRGSNTCQV 259

Query: 290 EFSNTFGFLLGDLNVS--------TGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEA 335
            F N    +   L            G  +  K+ +  L++    +       +R  L  A
Sbjct: 260 FFDNCKVPIENVLGGGPDMKTGGAAGVGQGFKVAMNILNNGRFGLGACAGASLRRVLGAA 319

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +A  R   G  L +  ++++    +ALD  A  +++F      D      E      I
Sbjct: 320 AEHANSRKQFGAPLANFGLIQKKFGVMALDAYAIESMAFMTTGMIDRGDPSCE------I 373

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K +  ++A   I E ++ +GG+G+++E    R  R+    SI  G+   + + + 
Sbjct: 374 EAAMCKVYGSEVAFTGINECIQVMGGTGFMKEWPFERLMRDCRILSIFEGTNEILRMLIA 433

Query: 456 --NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL-------ARFL 504
              +   G  L    +L      D  S+ K++   L+   S     +G+       A  L
Sbjct: 434 LSGIRTAGERLSSVGKLLQNPLSDPSSAAKEISDRLQRKFS-PTPLEGVHSSLKEPAELL 492

Query: 505 TEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            ++ A    A    L + G   + +     R  D+  +   M
Sbjct: 493 QKRTADFGDAVEFLLRKHGKKIVDEQMQLERIADSAIALFAM 534


>gi|134291066|ref|YP_001114835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134134255|gb|ABO58580.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 596

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 97/487 (19%), Positives = 190/487 (39%), Gaps = 63/487 (12%)

Query: 63  EYVLSCTAQE-LARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDGL 115
           E     TAQ  L   A +    L      G+R         V   P + A  R+ +  G 
Sbjct: 30  EDAGYDTAQAVLDESAKFCGEVLAPLNVDGDRNPSSWKDGAVTATPGFGAAFRQFVEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173
                   ++     +   I    + ++        + P +T  ++ AL+T  T    + 
Sbjct: 90  QGLQHPVEYDGQGLPK--LIATPCIEMLNAANLSFALCPLLTDGAIEALLTAGTDEQKQR 147

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S E+  T             + LTE + G+D+A + S+ +   DG Y + G K 
Sbjct: 148 YVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQGDGTYKVFGTKI 194

Query: 234 FLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++    D       ++LA+          +  F+VP+ L +     G+ N +    +++
Sbjct: 195 FITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSLGARNDVHCVSIEH 254

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T  L++ +     G+L+G+ N     +  M         +  +     +  +
Sbjct: 255 KLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVADRAYQK 314

Query: 335 AIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSF------RLANS 379
           A  +A+ R  S            +I  P ++R +  +      A AL++       +A+ 
Sbjct: 315 AAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRALTEGARALAYVAAAHSDIAHR 374

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +  +R+   A    + PI K W  +M   V +  ++  GG G+IEE   A++YR+   
Sbjct: 375 HADDATRTRHQAIYEYLVPIVKGWSTEMVNDVASLGVQVHGGMGFIEETGAAQYYRDGRI 434

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            +I  G+       L     L  G  + + L + ++  + + GK        + S+  + 
Sbjct: 435 LAIYEGTTAIQANDLVGRKTLRDGGAVAKALIAEIDATVAALGKVDGA---AAASMKAQL 491

Query: 498 KGLARFL 504
           +  AR L
Sbjct: 492 EKGARAL 498


>gi|83718149|ref|YP_439997.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167578540|ref|ZP_02371414.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
 gi|167616683|ref|ZP_02385314.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257143178|ref|ZP_05591440.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651974|gb|ABC36038.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 377

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 131/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EVVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T    + W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTTEQKERWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIPQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATQINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|332222215|ref|XP_003260262.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 1 [Nomascus leucogenys]
          Length = 421

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +                        +  +      + + 
Sbjct: 77  LIRRAWELGLMNAHIPENCGGLGLGTFDACLITEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPVNKAFTGFIVEADTPGVQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPVVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEIDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 413


>gi|330878798|gb|EGH12947.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 383

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 141/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +     +    T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPILNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N      G L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTDNPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      K    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGKPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|300692097|ref|YP_003753092.1| Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum PSI07]
 gi|299079157|emb|CBJ51825.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           PSI07]
          Length = 594

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/438 (19%), Positives = 179/438 (40%), Gaps = 57/438 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         +      +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 86  QGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEA 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + PK+ S E+  T             + LTE + G+D+A + ++ + + DG Y L 
Sbjct: 144 QKQLYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTYRLF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ + D     G+ N +   
Sbjct: 191 GTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVVPKFMVDEDGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L+F +     G L+G+ N     +  M         +  +     
Sbjct: 251 SIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSER 310

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YAR R  S            +I  P +KR +  +      A AL++  A + D
Sbjct: 311 AYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACD 370

Query: 382 EAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                ++E       +    + P+ K W  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 371 AGHHAADEPTRQQNESLYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDS 490
           ++    I  G+      D++    +  G  +   + + +   E  L + G     ++R  
Sbjct: 431 DARILPIYEGTTAIQANDLIGRKTMRDGGAVALGICAEIAKVEAQLAAKGGAHCEVMRQR 490

Query: 491 ISLCKED-KGLARFLTEK 507
           ++  +E  + + RF+  +
Sbjct: 491 LTAGREALESVVRFVVAQ 508


>gi|229032643|ref|ZP_04188606.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1271]
 gi|228728642|gb|EEL79655.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1271]
          Length = 616

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 69  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 120

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 121 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 167

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 168 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 225

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 226 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 283

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 284 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 343

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 344 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 403

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 404 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 463

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 464 MMMMPEEVGDEPLALQKYL 482


>gi|126455128|ref|YP_001064354.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|167736479|ref|ZP_02409253.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167813557|ref|ZP_02445237.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167843702|ref|ZP_02469210.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167908910|ref|ZP_02496001.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|242317521|ref|ZP_04816537.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|126228770|gb|ABN92310.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242140760|gb|EES27162.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 378

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++  V     + +        A    
Sbjct: 28  PHHERWEEQGYVD--RDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|53717700|ref|YP_106686.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126439356|ref|YP_001057126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|134281361|ref|ZP_01768069.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167717438|ref|ZP_02400674.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167822097|ref|ZP_02453568.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167892182|ref|ZP_02479584.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167900692|ref|ZP_02487897.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167916952|ref|ZP_02504043.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
 gi|226193156|ref|ZP_03788766.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237814461|ref|YP_002898912.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia
           pseudomallei MSHR346]
 gi|254184131|ref|ZP_04890722.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254186597|ref|ZP_04893114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194723|ref|ZP_04901154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|254261872|ref|ZP_04952926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254298603|ref|ZP_04966054.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52208114|emb|CAH34044.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126218849|gb|ABN82355.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|134247028|gb|EBA47114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157808578|gb|EDO85748.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157934282|gb|EDO89952.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169651473|gb|EDS84166.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184214663|gb|EDU11706.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|225934756|gb|EEH30733.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237505530|gb|ACQ97848.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia
           pseudomallei MSHR346]
 gi|254220561|gb|EET09945.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 378

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++  V     + +        A    
Sbjct: 28  PHHERWEEQGYVD--RDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|296392044|ref|ZP_06881519.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 596

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 168/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +    L     
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAVASEALQGRAALAPLAE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|328544910|ref|YP_004305019.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414652|gb|ADZ71715.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 593

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/456 (19%), Positives = 168/456 (36%), Gaps = 54/456 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P W     R I  G +                  + AA L +         + P++
Sbjct: 70  VTTTPGWRDCYHRWIEGGWNALPSSPDHGGQGLPL--MLYAATLEMWNSASMAFALGPTL 127

Query: 157 TSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL    +  +   +  K+ S E+  T             + LTE + G+D+ A+
Sbjct: 128 TVGAVEALDKHASAELKSRYLDKLVSGEWMGT-------------MNLTEPQAGSDLNAL 174

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++ ++  DG Y + G K F++    D       ++LA++         +  FLVP+ L 
Sbjct: 175 KARAERRPDGTYRIFGQKIFITYGEHDITDNIVHLVLARLPDAPAGTRGISLFLVPKFLV 234

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G+ N +    +++K+G   + T  + + +     G+L+G+ N     +  M   
Sbjct: 235 NEDGSLGARNDVRCAGVEHKLGIHGSPTCTMIYGDGEGAIGWLVGEENRGLACMFTMMNN 294

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDI 366
             L   I  +     +  +A+ YA  R               +   P +KR++  +    
Sbjct: 295 ARLAVGIQGLGIAERAFQQALAYALDRRQGRAPGDAGEGMSAIAGHPDIKRSLLFMQART 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIG 420
             A A+ F  A++ D A   ++  A A        + PI K     +   V +  ++  G
Sbjct: 355 QVARAICFACAHAIDMASLATDPEAKAHWSDRAGLLTPIAKALSTDIGVEVASTGVQIHG 414

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGS 478
           G GYIEE   A+H R++    I  G+     +D++   L   G        + L      
Sbjct: 415 GMGYIEETGAAQHLRDARIAPIYEGTNGIQAIDLVQRKLPLAGGAHVRGFIANLAALAKE 474

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           +       L     + +E        TE + L + A
Sbjct: 475 AAGSNQPDLGAVAPVLEEAVADLAVATEWL-LQAQA 509


>gi|311743087|ref|ZP_07716895.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313767|gb|EFQ83676.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 381

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 150/392 (38%), Gaps = 36/392 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
            A +A    P L +Y         +E         R++   GL        F        
Sbjct: 18  AAFLAKKVAPHLESY---------IEDKSLPRDFWRQAGDLGLLSLEVPEEFGGAEAGDF 68

Query: 133 --HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             + + A  L  ++   A  +   S  +A  +  + T    K W P + + E        
Sbjct: 69  RFNAVLAEELSKVSAALASCVGIHSDITAPYLVDLGTEEQKKRWLPGVATGE-------- 120

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QV 249
                + + +G+TE  GG+D+AA+ +   +  D  + ++G K F+++  S   I+ A + 
Sbjct: 121 -----ILLAIGMTEPGGGSDLAALKTTAVRDGD-QWVINGSKTFITNGFSADLIVTAVRT 174

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
               G   +     + +  G    R  +K+G   + T EL F N       +LG+++   
Sbjct: 175 SPEKGAKGITLFGIEATDEGFSRGRKLDKVGQTESDTAELFFENVRLGDDRVLGEVDRGF 234

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + +      L  AI +V+  +  LAE I Y + RH  G  +      K  +A++   I
Sbjct: 235 IYMMERLPQERLSCAISNVAHAKQILAETIQYTKDRHAFGQPIGAFQHNKFLLAELVTKI 294

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA A       +    +  + +AA         K+W   +   V+   ++  GG G++ 
Sbjct: 295 EAAEAYVDAAVVAHTAGRLTAIDAAK-------VKWWSSDIQNDVLDHCVQLHGGYGFMN 347

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  +AR +R++    I  GS   M   +   L
Sbjct: 348 EYRVARAWRDARVTRIWAGSNEIMKELIGRDL 379


>gi|126336530|ref|XP_001378544.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 629

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/469 (17%), Positives = 172/469 (36%), Gaps = 50/469 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +L R    GL   +    +  +        R   +       A  L +        + L
Sbjct: 104 EILTRLKQLGLFGMLIPEEYGGLGLSHIMYARLGEILSQDGAIAVTLAAHQAIGLKGILL 163

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + PK+ + EY                  LTE   G+D A+I ++     D 
Sbjct: 164 AGTEEQKAKYLPKLATGEY-------------IAAFCLTEATSGSDAASIQTRATLSEDK 210

Query: 225 -IYCLSGHKWFLSSP-MSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             Y L+G K ++++  ++  F + A+ E           +   + + +  G+   + +NK
Sbjct: 211 KFYILNGSKIWITNGSLASIFTVFAKTELFDSDGFKRDKITAFIVERNFGGITNGKPENK 270

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G R + T E+ F NT   +    NV     +  KI +  L+S   ++  +        +
Sbjct: 271 LGIRGSDTCEVRFENTKVPI---ENVIGEVGDGFKIAMNVLNSGRFTMGSLVAGMLKKLI 327

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                YA  R      L +  +++   A +A       ++++  A   D       + + 
Sbjct: 328 GMTAEYACTRKQFNRPLSEFGLIEEKFALLARKTYVMESMAYLTAGMMDS--PGVPDCSM 385

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A + K +  + +   ++EA++ +GG GY+++    R+ R+S    I  G+   + +
Sbjct: 386 ---EAAMVKVFSSEASWICVSEALQIVGGLGYMKDYPYERYLRDSRILQIFEGTNEVLRM 442

Query: 453 DVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS------ISLCKED------- 497
            +    L   G  L + L    + ++G++ + +   LR+S      + L  +D       
Sbjct: 443 YIALTGLQHAGKVLTKTLDDLRKGNVGNAMEHLSKKLRESVRRKVDLGLTGKDGIVHPNV 502

Query: 498 KGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           +  A+ L E +          L R G   + +     R  D   + + M
Sbjct: 503 EESAKRLEENVYYFGKTVEVLLKRFGKTILEEQMTMKRMADIMINMYAM 551


>gi|281350594|gb|EFB26178.1| hypothetical protein PANDA_021175 [Ailuropoda melanoleuca]
          Length = 396

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 129/342 (37%), Gaps = 31/342 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL 164
           +++     GL     +  +          I               +    +    +++  
Sbjct: 79  IIQGLFQQGLMGIEIETKYGGTGASFFSSILVIEELAKVDASVALMCDIQNTIINNLIRK 138

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      +  K+               T     + L+E   G+D+ ++ ++  K  + 
Sbjct: 139 YGTEEQKATYLTKL--------------ATEKIGSICLSEAGAGSDLFSLKTRADKKGNY 184

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  S+  +  F+++A V   +G   +   L D    GL   + +NK+G R++
Sbjct: 185 YVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITCFLVDRDTEGLHIGKAENKMGIRAS 244

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HY 338
           +T  L F N     + + N+        K  I  L+   + ++   + LA+        Y
Sbjct: 245 STCPLTFENVK---IPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPY 301

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  + D   ++  +A +A+ + AA  L++  A   +  +   +EA+ A     
Sbjct: 302 MKERMQFGKRIFDFQGLQHQVAHVAIQLEAARLLTYNSARLLEAGQPFIKEASMA----- 356

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             KY+  ++A    ++ +E +GG GY ++  + +++R++   
Sbjct: 357 --KYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKYFRDAKVG 396


>gi|213157970|ref|YP_002320768.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213057130|gb|ACJ42032.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
          Length = 387

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 142/395 (35%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEMTPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  +    +  +     P I S E      
Sbjct: 69  DPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVAALQTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    L  K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLIDAHSEGITKTPL-RKMGWWASDTAHLHFDQVRVPVSNLLGKEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++     V   EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E         + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQLKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|254451422|ref|ZP_05064859.1| isovaleryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198265828|gb|EDY90098.1| isovaleryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 382

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 147/399 (36%), Gaps = 31/399 (7%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             +L    N     +HA+      P   + D+    P   AL R     GL     D ++
Sbjct: 2   TFDLGDDVNALRDMVHAWAQAHLKPMAAQIDRDNLFP--PALWRDMGDLGLLGVTVDETY 59

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   AH +    +   +   A    + S    + + L  T      + P++ S E+
Sbjct: 60  GGAGMSYLAHTVAVEEIARASASVALSYGAHSNLCVNQIKLNGTDAQKATYLPRLVSGEH 119

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           L ++E   G+D+ +++ + ++ +D         W  +   +D  
Sbjct: 120 -------------VGALAMSESGAGSDVVSMSLKAERRNDRYILNGTKYWITNGAEADTL 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG
Sbjct: 167 VVYAKTDPAAGSKGITAFLIEKSMMGFTTSPHFDKLGMRGSNTAELVFDDVEVPFDNVLG 226

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        +  A + +  +   L E + Y  +R   G  + +  +M+  +A
Sbjct: 227 EEGRGVRVLMSGLDYERVVLAGIGLGIVAACLDEVMPYIAQRKQFGEPIGNFQLMQGKVA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + +A A  + +A + D+      +AA           +  + A     +A++  G
Sbjct: 287 DMYTALNSARAYVYEVAKACDKGTVTRADAA-------ACCLYASEQAMVQAHQAVQAFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G+G++ +  +AR +R++    I  G+     + +   L 
Sbjct: 340 GAGFMADAPVARLFRDAKLMEIGAGTSEIRRMLIGRELM 378


>gi|293611428|ref|ZP_06693723.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826212|gb|EFF84582.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 387

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 143/395 (36%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEIAPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  V    +  +     P+I S E      
Sbjct: 69  DPFYSLLAGVEMAKAGSGGVHISLMVHTIGAPPVQHFGSEELKSRVLPEIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+A + ++  +  +  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVATLQTKAVRDGN-YYIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    LK K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++     V   EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E         + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|149724239|ref|XP_001504812.1| PREDICTED: acyl-Coenzyme A dehydrogenase, very long chain isoform 2
           [Equus caballus]
          Length = 633

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 80/415 (19%), Positives = 162/415 (39%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I S     
Sbjct: 167 ILLFGTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRSSAVPS 213

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 214 PCGKYYTLNGSKIWISNGGLADIFTVFAKTPVTDAATGAVKEKITAFVVEKSFGGVTHGP 273

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F          L    G     K+ ++ L++    ++       
Sbjct: 274 PEEKMGIKASNTAEVYFDGVRVPSDNVLGEVGG---GFKVAMHILNNGRFGMAAALAGTM 330

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 331 KGIIAKAVDHAANRTQFGEKIHNFGIIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 389 ----FQIEAAISKIFGSEAAWQVTDECIQIMGGMGFMKEAGVERVLRDLRIFRIFEGTND 444

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS----------- 492
            + L V     + KG  L  +L S L+   G++G    +    L+               
Sbjct: 445 ILRLFVALQGCMNKGKEL-SKLGSALKNPFGNAGLLLGEAGKQLKRRAGMGSGLSLSGIV 503

Query: 493 --LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D+    + M+
Sbjct: 504 HPDLSRSGELAVQALEQFATVVEAK-LIKHKKEIVNEQFLLQRLADSAIDLYAMV 557


>gi|326571368|gb|EGE21383.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC7]
          Length = 559

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 85/500 (17%), Positives = 179/500 (35%), Gaps = 61/500 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSI 111
           L    E         L   A++    +      G+          V     +     +  
Sbjct: 27  LSAYAELDTDTINSYLEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEAYAQYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPR 169
             G      +  F  +    +  + +A   +M        M P ++  ++  +    T  
Sbjct: 87  ELGFPAINAEPEFGGLGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGTEV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+ +  +  T             + LTE   G+D+  I ++     DG Y ++
Sbjct: 145 QKATYLEKMNTGAWSGT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAIT 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+S+   D       I+LA++         +  F+VP+ + +     G  N +   
Sbjct: 192 GQKIFISAGEHDLTENIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G +++AT  + F +  G+L+G  N     +     +  L +AI  ++   ++  
Sbjct: 252 SIEHKMGIKASATCVMNFDHAKGYLIGPKNRGLNAMFTFVNVARLGTAIQGLAAPELAFQ 311

Query: 334 EAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRL---AN 378
            ++ YA+ R              S   +I  P ++  +           AL + L   A+
Sbjct: 312 GSLTYAKERTAMRALSGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFAD 371

Query: 379 SFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + ++ SE         ++ PITK +  +         ++  GG GYI E  + ++ R
Sbjct: 372 TVAKGENPSEVKFADEMLSLLTPITKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++  + +  G+     LD+L     G    +       + Q    +       +   +S 
Sbjct: 432 DTRISCLYEGTTKIQALDLLGRKVLGSQGRMLANFTQIIHQFCQENADN--DEVGQMVST 489

Query: 494 CKEDKGLARFLTEKIALASS 513
             +     R LT +IA+ S+
Sbjct: 490 LAKLNQQWRDLTSRIAMQST 509


>gi|291398674|ref|XP_002715957.1| PREDICTED: medium-chain acyl-CoA dehydrogenase [Oryctolagus
           cuniculus]
          Length = 421

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL  +    S   +          A             +  +      V + 
Sbjct: 77  LIKRAWELGLINTHIPESCGGLGLGSFDACLIAEELAYGCTGIQTAIEANSLGQIPVIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  + +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNEQQKQKYLGRMT-------------EQPLMCAYCVTEPGTGSDVAGIKTRAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVRVP---KENVLLGEGAGFKIAMGAFDKTRPTVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAVSFLLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  V  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAGDIANQVATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLVIAR 413


>gi|311109830|ref|YP_003982681.1| acyl-CoA dehydrogenase 3 [Achromobacter xylosoxidans A8]
 gi|310764519|gb|ADP19966.1| acyl-CoA dehydrogenase 3 [Achromobacter xylosoxidans A8]
          Length = 384

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 132/392 (33%), Gaps = 28/392 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q+L R             P     D    +P  H +       GL    +   +   
Sbjct: 13  RQIQDLIRRVAR-----EKVAPRANEIDSTAEYP--HDMFELLKDLGLFTLPFPEQYGGA 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               +  +       +    A  L+   V     +    T        P + S E     
Sbjct: 66  GSMLSACLAIEEFGRVCYNTAYLLLVQWVPFG-AILHGGTEAQKARLLPGLASGE----- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                   +      TE + G+D++ I ++ +K+  G        W  +S ++D  ++ A
Sbjct: 120 --------LRGAFSTTEAQSGSDVSGIKTRAEKVDGGFTLNGAKIWCTNSDIADFILVAA 171

Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +  EG      +   + +    GL   R + K+G R   +  L   N F      L    
Sbjct: 172 KYREGEK--DGISLFVVEKGTPGLQVGRKEEKMGARGVPSCPLFLDNVFVPEENMLGGGF 229

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             V +             V   + +L  A+ +   R   G  + +   ++  +AD+A+  
Sbjct: 230 RAVMEAFNASRPLIGARGVGLAQGALDHAVEFVTNRAAFGQQVSEFQGVRWMLADMAIQT 289

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A+  D     SE A     +A + K +    A  V  +A++  G +G   
Sbjct: 290 EAARHLVYRAASLVDSGAPASELA----PVAAMAKCFASDTAMKVATDAVQLFGAAGISS 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I R++R++    I+ G+       + N L
Sbjct: 346 EYPINRYFRDAKVLQIIEGTNQIQRNIISNGL 377


>gi|293604778|ref|ZP_06687177.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816829|gb|EFF75911.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 589

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 94/497 (18%), Positives = 183/497 (36%), Gaps = 58/497 (11%)

Query: 68  CTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
              +E A  A      L+      P   R   V   P +     +    G         +
Sbjct: 39  AVLEESATFAAEVLAPLNHPADREPSSWRDGAVTTAPGFKQAFAQYTEAGWQGMSHPVEY 98

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                        + +   A L        +  +   +    +P + K +   + S ++ 
Sbjct: 99  GGQGLPGLIGSPCSEMLNAANLSFALCPLLTNGAIEALLTAGSPELKKRFIGPMISGQWT 158

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE + G+D+A I ++ Q + DG Y LSG K F++    D   
Sbjct: 159 GT-------------MNLTEPQAGSDLAMIRTRAQPVGDGTYRLSGTKIFITYGDHDLTE 205

Query: 243 ---FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVE 288
               ++LA++         +  FLVP+ L +     G+ N +    +++K+G +++ T  
Sbjct: 206 NILHLVLARLPDAPEGVKGISLFLVPKFLVNEDGSLGARNDVTCVSIEHKLGIKASPTAT 265

Query: 289 LEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L+F +  G   +L+G  N     +  M         +  ++    +   A+ YA  R  S
Sbjct: 266 LQFGDAGGALGYLVGQENRGLDAMFIMMNAARYAVGVQGIAIADRAYQHALAYAAERVQS 325

Query: 346 GG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                       +I  P ++R +  +     A  AL++  A   D A +  +     R +
Sbjct: 326 RPVDGSSREAVTIIHHPDVRRMLGTMRALTEAGRALAYVTAGHADLAHASPDADERKRHL 385

Query: 397 A------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A      PI K WC +M+  V +  ++  GG G+IEE   A++YR++   +I  G+    
Sbjct: 386 AIQEFLVPIVKGWCTEMSIDVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQ 445

Query: 451 VLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
             D++    L  G  + + L   + Q       +        +   ++ +     + +  
Sbjct: 446 ANDLIGRKTLRDGGAVAQGLLDAIRQTETELEARSEPAANLMLKPLRQARLALANVVDF- 504

Query: 509 ALASSAAALYRAGMNDI 525
            LA++A+       N +
Sbjct: 505 VLANAAS-----APNAV 516


>gi|163732339|ref|ZP_02139785.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           litoralis Och 149]
 gi|161394637|gb|EDQ18960.1| putative acyl-CoA dehydrogenase family protein [Roseobacter
           litoralis Och 149]
          Length = 564

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 85/461 (18%), Positives = 166/461 (36%), Gaps = 36/461 (7%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDG 114
            E     V      E  ++ +     L         R +   V   P +    R     G
Sbjct: 29  FEAASPDVTQAVLVEAGKLCDEVLAPLQRIGDMHPARLENGVVRTPPGFDVAWRAIAQGG 88

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                 D  F  +    A       +   A L        +      +    +  +   +
Sbjct: 89  WVGMAADPEFGGMALPMAVTSAVNEMMSGACLSLQIAPLMAQGQIEALQHHASDEIKALY 148

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+ + E+                + LTE + G+D+ A++S+ Q   DG Y ++G K +
Sbjct: 149 LPKLTAGEW-------------TATMNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIY 195

Query: 235 LSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S    D       ++LA++         +  FLVP+ + +     G+ N +    L++K
Sbjct: 196 ISWGDHDVADNICHLVLARLPNAPAGTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHK 255

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   + T  +++    G+L+G+       +  M     L            +  +A+ Y
Sbjct: 256 LGLHGSPTAVMQYDAATGWLIGEKEGGMAAMFTMMNNARLGVGGQGTGVAEAAYQQALSY 315

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIM 396
           AR R      +++   ++R +  +  DI AA  +    A + D A +   ++  A A ++
Sbjct: 316 ARERKQGKSAIVNHADVRRMLGTMKADIYAARVIGLTCAVAIDMAHATGSADWQARAALL 375

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VL 455
            PI K +      AV    ++  GG G++EE   A+  R+    +I  G+     +D V 
Sbjct: 376 TPIAKAFGSDTGIAVADAGIQVHGGMGFVEETGAAQFSRDVRVTAIYEGTNGIQAMDLVA 435

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
             +        +L   +E       K  +  L +++    E
Sbjct: 436 RKMADNGEAAHRLLDEIEA-CAEHAKTTLPELAEAVWQASE 475


>gi|86751182|ref|YP_487678.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574210|gb|ABD08767.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 381

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/416 (19%), Positives = 149/416 (35%), Gaps = 49/416 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + +EL+   +       ++LA  A               R  K+    AW  L     
Sbjct: 6   PWMTEELDTFRDQFRKFLEKDLAPHAEKW------------RKQKMVDRSAWLKL----G 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTP 168
             G        ++  +    A+   AA    M  +    L   +V+S   A  +    + 
Sbjct: 50  EMGALVPSVPEAYGGLGASFAY--DAAIYEDMESIVPDALSGVTVSSGIVAHYILNYGSE 107

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P              M +  +  G+ +TE   G+D+ ++ +  +   D  Y +
Sbjct: 108 EQKQRWLP-------------AMARGELIGGIAMTEPGTGSDLQSVRTTAKLEGD-TYVI 153

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++   +D  I++A+  G  G   +  + +E     G    R  +KIG  ++ T
Sbjct: 154 NGQKTFITNGQNADLIIVVART-GGPGAKGLSLIAMETKDNPGFKRGRNLDKIGLHASDT 212

Query: 287 VELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F N        L      G  + M+ L    L  A+ +V+ M  ++     Y R R
Sbjct: 213 SELFFDNATAPKENVLGGEEGKGFAQLMQQLPQERLIIAVGAVAAMERAVKLTTDYTRER 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  ++D       +A+   +   A           D    R        + A + K+
Sbjct: 273 KAFGQPILDFQNTAFTLAERKTEAFIARVFV-------DFCIERLIAGDLDAVTASMAKW 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +     + E ++  GG GY++E  I R + ++    I  G+   M L +   L
Sbjct: 326 WTTQKQVETVDECLQLHGGYGYMQEYPIGRMFVDARIQKIYGGTNEVMKLLIARSL 381


>gi|326569434|gb|EGE19494.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC8]
          Length = 559

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/500 (17%), Positives = 179/500 (35%), Gaps = 61/500 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSI 111
           L    E         L   A++    +      G+          V     +     +  
Sbjct: 27  LSAYAELDTDTINSYLEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEAYAQYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPR 169
             G      +  F  +    +  + +A   +M        M P ++  ++  +    T  
Sbjct: 87  ELGFPAINAEPEFGGLGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGTEV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+ +  +  T             + LTE   G+D+  I ++     DG Y ++
Sbjct: 145 QKATYLEKMNTGAWSGT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAIT 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+S+   D       I+LA++         +  F+VP+ + +     G  N +   
Sbjct: 192 GQKIFISAGEHDLTENIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G +++AT  + F +  G+L+G  N     +     +  L +AI  ++   ++  
Sbjct: 252 SIEHKMGIKASATCVMNFDHAKGYLIGPKNRGLNAMFTFMNVALLGTAIQGLAASELAFQ 311

Query: 334 EAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRL---AN 378
            ++ YA+ R              S   +I  P ++  +           AL + L   A+
Sbjct: 312 GSLTYAKERTAMRALSGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFAD 371

Query: 379 SFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + +S SE         ++ PITK +  +         ++  GG GYI E  + ++ R
Sbjct: 372 TVAKGESPSEVKFADEMLSLLTPITKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++  + +  G+     LD+L     G    +       + Q    +       +   +S 
Sbjct: 432 DTRISCLYEGTTKIQALDLLGRKVLGSQGRMLANFTQIIHQFCQENADN--DEVGQMVST 489

Query: 494 CKEDKGLARFLTEKIALASS 513
             +     R LT +IA+ S+
Sbjct: 490 LAKLNKQWRDLTSRIAMQST 509


>gi|317506471|ref|ZP_07964272.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255232|gb|EFV14501.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 381

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 131/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V    AW         L   +   G         F     ++  +     L  +AQ    
Sbjct: 26  VPHREAWLESGVVDRELWLEAGKGGFLGMSVPAEFGGGGGEEDFRFNTVILEELAQARTT 85

Query: 150 HLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            +  P         L         + W P   S E             +   + +TE   
Sbjct: 86  GVGIPLHNDVVQPYLTDLANEEQKQRWLPGFCSGE-------------IITAIAMTEPGT 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+  I +   +  D  + L+G K F+++ + +D  I++AQ E   G   +   + +  
Sbjct: 133 GSDLQGIKTTAVRKGDD-WLLNGAKTFITNGINADLVIVVAQTEPGSGAKGLALFVVERG 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    R  +KIG R+  T EL F +        L  V  G    M+ L    L  A+ 
Sbjct: 192 MPGFERGRKLDKIGLRAQDTAELFFEDVLVPRENVLGEVGQGFAYLMRNLPQERLSIAVG 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + + +  +L   + Y + R   G  +      +  +A++  + AA  AL        D +
Sbjct: 252 AAAAIDFALQTTLEYVQNRQAFGKPVGKFQNTRFELAELTAEQAAVRALV-------DRS 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    +   A I K +  +    V+   ++  GG GY+ E  IA+ Y +S   +I 
Sbjct: 305 IEFHLRNELSIQDAAIAKLYATERQLHVVDRCLQLHGGYGYMLEYPIAQAYVDSRVQTIY 364

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 365 GGTSEIMKEIIGRSL 379


>gi|313238943|emb|CBY13932.1| unnamed protein product [Oikopleura dioica]
          Length = 402

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 138/379 (36%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK   +P     + +    GL        F            +          A
Sbjct: 47  PIASEVDKKHMYP--KEQISQMTEMGLMGINVPEEFGGAGMSALAYAVSCEEISRGCASA 104

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +     +           W                   T      GL+E   
Sbjct: 105 GVIMSAHNSLYIAPIVNWGNDDQKVKWVS--------------DWATGKIGCFGLSEPGN 150

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++   K+  G        W  ++  ++A ++ A  +  +    +   +   + 
Sbjct: 151 GSDAGAASTTATKVDGGYVINGTKMWITNAYEAEASVIFATTDKSMKHKGISCFVVPNNS 210

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI---- 322
           +G    + ++K+G R ++T  L + N F     + N+   P    KI +  LD       
Sbjct: 211 DGFSLGKKEDKLGIRGSSTASLIYENCFVP---EENLIGEPGFGFKIAMNTLDGGRIGIA 267

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   + ++  A+ Y+  R      +    ++++ IAD+ + I +A  L+++ A   D
Sbjct: 268 AQAIGIAQAAMDCAVKYSLDRKSFNVPIAKHQMIQQKIADMEVKIESARMLNYKAAALKD 327

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S ++ AA A++ A        + A  V  ++++ +GG G++ +    RHYR++    
Sbjct: 328 NGQSYTKHAAMAKLAA-------SEAATWVAHQSIQVLGGMGFVSDMPAERHYRDARITE 380

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L +   + K
Sbjct: 381 IYEGTSEVQRLVIAGNVLK 399


>gi|156553409|ref|XP_001599017.1| PREDICTED: similar to CG12262-PA [Nasonia vitripennis]
          Length = 415

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 136/401 (33%), Gaps = 42/401 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ELA+        P    Y   G      E+      +++++   GL      +S   
Sbjct: 37  EMLELAQKFTREEIIPVAAKYDRSG------EYP---WEIVKKAWSVGLLNHHIPQSVGG 87

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +          +             +  S    + V +       K +  ++        
Sbjct: 88  LEFGIFDGCIVSEAIAYGCTGIKTALEGSGLGQTPVIMAGNHEQQKKYLGRLL------- 140

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +  G  +TE   G+D+  + ++  K  +         W  +  +++ + +L
Sbjct: 141 ------EEPLVAGYCVTEPGAGSDVNGVQTKAVKKGNEWILNGTKMWITNGGVANWYFVL 194

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+                + +    G+   R +  +G R++ T  + F +     + + N
Sbjct: 195 ARTNPDPKAPASKAFTGFIVERDWEGVTPGRKEVNMGQRASDTRMITFEDVR---IPEEN 251

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     K+ +          A  +V   + +L EA  YA  R   G ++ +   +  
Sbjct: 252 VLIGEGAGFKVAMGTFDKTRPAVACGAVGLAQRALDEATKYALERKAFGKLIAEHQAVAF 311

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+++ +  A     + A++ D  +          ++A I K +   +A     +A++
Sbjct: 312 MLADMSIGVETARLAWMKAAHALDNKQPNG------SMLASIAKCYAADVANKCATDAVQ 365

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G+  E  + +  R++    I  G+     L +   L
Sbjct: 366 IFGGAGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIISRQL 406


>gi|110681103|ref|YP_684110.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109457219|gb|ABG33424.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 382

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/361 (20%), Positives = 128/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C      +        H+         A L +      S   A  + 
Sbjct: 43  RETWAQAGELGLLCPSIPEEYGGAGGDFGHEAAILIEAARANLASWGHGIHSGIVAHYLL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W PK+ S E                 L +TE   G+D+ +I ++  K  +
Sbjct: 103 AYGTEDQKNRWLPKMVSGEM-------------VGALAMTEPSTGSDVQSIKTKAVKDGN 149

Query: 224 GIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGN 281
             Y LSG K F+++       I+ A+ +   G   V  ++ +    +G    R   K+G 
Sbjct: 150 A-YKLSGQKTFITNGQHANLIIVAAKTDPAEGSKGVSLVVVETEGADGFKRGRNLEKVGL 208

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            ++ T EL F +        L      G  + M+ L    L  A  +V  +  ++   I 
Sbjct: 209 HASDTSELFFDDVEIPPENILGGAEGQGFYQMMQQLPQERLIIACGAVGAIEGAVERTIT 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  +A+     A A A       +    +   E+AA A    
Sbjct: 269 YCKEREAFGGPLTQFQNTRFKLAECKTKAAVARAFLDDCMVAHLRGELSVEKAAMA---- 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW       V+ E ++  GG G+++E +IA  + ++    I  G+   M   +   
Sbjct: 325 ---KYWITDTQGEVLDECVQLHGGYGFMQEYAIAEMWADARVQRIYGGTNEIMKELIARS 381

Query: 458 L 458
           L
Sbjct: 382 L 382


>gi|254820007|ref|ZP_05225008.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 380

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + W P I S E             + + + +TE   G+D+A I +   +  D  
Sbjct: 103 ANDEQKERWLPGIISGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+SS +  D  +++ + +   G      L+ +    G    R   K+G    
Sbjct: 149 WIINGAKTFISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQ 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG        +        L  AI +++G R +  + + YA+ 
Sbjct: 209 DTAELAFENVRVPSANLLGKEGRGFYHLMHNLPSERLSIAISAIAGARETWRQTLQYAKD 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++  ++        R   +  + +  + EA+ A+       
Sbjct: 269 RKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLQAVVDGELTAVEASKAKW------ 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            WC + A  VI   ++  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 323 -WCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIMKDIIGRDL 378


>gi|330963300|gb|EGH63560.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 383

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 141/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSGGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N      G L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTDNPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      K    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGKPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|239931119|ref|ZP_04688072.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439488|ref|ZP_06578878.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342383|gb|EFE69339.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 386

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 147/403 (36%), Gaps = 35/403 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   +EL R          A+     +  D  E H   + ++R     GL    +   +
Sbjct: 5   LSPELEELRRTVEEF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEY 59

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +     A  +    L  +    A  L +     A  + L  T    + W P++ S E 
Sbjct: 60  GGMGGDYFALGVALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKRAWLPRLCSGE- 118

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDA 242
                       V    GLTE  GG+D  A  +  +       + ++G K F+++  +D 
Sbjct: 119 ------------VLGAFGLTEPDGGSDAGATRTTARLDEATNEWVINGTKCFITNSGTDI 166

Query: 243 ---FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                + A    G  G  L+  ++      G       +K+G  ++ T EL F +     
Sbjct: 167 TGLVTVTAVTGRGPGGKPLISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFQDVRVPA 226

Query: 299 LGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G  + ++IL    +  A ++    +  + E++ YA+ RH  G  +     +
Sbjct: 227 SNLLGEEGRGYAQFLRILDEGRIAIAALATGLAQGCVDESVKYAKERHAFGRPIGANQAI 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ +    A       A+     +   +EAA A       K +   +A     +A
Sbjct: 287 QFKIADMEMKAHTARLAWRDAASRLVAGEPFKKEAALA-------KLYSSTVAVDNARDA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 340 TQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|228923735|ref|ZP_04087013.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835864|gb|EEM81227.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 608

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|312382269|gb|EFR27785.1| hypothetical protein AND_05111 [Anopheles darlingi]
          Length = 1875

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 159/412 (38%), Gaps = 44/412 (10%)

Query: 150  HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             + +        + L       + + P + S               V     LTE   G+
Sbjct: 1414 FIGAHQSIGFKGILLYGNKEQKEKYLP-LVST------------GKVYAAFALTEPSSGS 1460

Query: 210  DIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLL 262
            D  +I  +  K +DG  Y L+G K ++S+  ++D   + AQ    + + G     V   +
Sbjct: 1461 DAGSIRCRAVKSADGKHYVLNGSKIWISNGGIADIMTVFAQTEVEDPKTGQKKDKVTAFI 1520

Query: 263  EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
             +    G+     +NK+G + + T E+ F +    +    NV     +  K+ +  L++ 
Sbjct: 1521 VERGFGGVSSGPPENKMGIKCSNTAEVYFEDVKIPV---ENVLGKEGDGFKVAMNILNNG 1577

Query: 322  IMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               ++      MR  + +A  +A  R   G  +     ++  +A +A+      ++++ +
Sbjct: 1578 RFGMAATLSGTMRACIQKAAEHATNRVQFGRKIETYGGIQEKLAKMAMHHYVTQSMAYMI 1637

Query: 377  ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            + + D             + A I+K +  + A  V  EA++ +GG G++++  + R  R+
Sbjct: 1638 SGNMDTGSLD------YHLEAAISKVFASESAWYVCDEAIQILGGMGFMKDCGLERVMRD 1691

Query: 437  SPANSILLGSGNAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSIS 492
                 I  G+ + + L V    +   G +L   ++ F     ++G   K+        I 
Sbjct: 1692 LRIFRIFEGTNDILRLFVALTGIQYAGGHLKELQKAFKNPATNMGLIFKEGSRRAIRRIG 1751

Query: 493  LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                D    R  T ++      + L + G   + + FL NR  D    T+ M
Sbjct: 1752 YGGTDLTSLRGRTAEV-----ESLLIKYGKKIVDEQFLLNRLADAAIDTYAM 1798


>gi|304406434|ref|ZP_07388090.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304344492|gb|EFM10330.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 592

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 135/373 (36%), Gaps = 34/373 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+R++   GL  +    ++  +   +      +     A   A  + +        +  
Sbjct: 64  ELMRKAGELGLLGADVPEAYGGLGLDKVSTTLLSETMAEASSFALSVGAHVGIGTLPIVF 123

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     + P +                +      LTE   G+D     +  +   DG
Sbjct: 124 FGTPEQKARYLPDL-------------AAGTRIAAYCLTEPGSGSDALGARTTARLSPDG 170

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K +  ++  +D +I+ A+V+G          + +    G      + K+G +
Sbjct: 171 SHYLLNGSKLYITNAAFADIYIVYAKVDGDH----FTAFIVERGTPGFTVGPEEKKMGIK 226

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L F +    +   L  V  G      IL           V   + ++  ++ YA
Sbjct: 227 GSSTCPLFFEDAPVPVANVLGEVGKGHQIAFNILNIGRFKLGAGCVGTAKEAIRLSVGYA 286

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--------EAA 391
             R   G  +   P++   +AD+ +      ++ +R A   DE  S+++        +AA
Sbjct: 287 AARKQFGRPIASFPLIGAKLADMNIAAFVMESMVYRTAGWIDEGLSQADPNAPDSGAQAA 346

Query: 392 YARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            A         I K +  +    +  E ++  GG GY++E  I R YR+S  N I  G+ 
Sbjct: 347 KAIAEYALECSIVKVFATEALDYIADEGVQIHGGYGYMQEYKIERIYRDSRINRIFEGTN 406

Query: 448 NAMVLDVLNLLEK 460
               + +   L K
Sbjct: 407 EINRMLIPGTLMK 419


>gi|2392312|pdb|1EGE|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392313|pdb|1EGE|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392314|pdb|1EGE|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392315|pdb|1EGE|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|49259281|pdb|1T9G|A Chain A, Structure Of The Human Mcad:etf Complex
 gi|49259282|pdb|1T9G|B Chain B, Structure Of The Human Mcad:etf Complex
 gi|49259283|pdb|1T9G|C Chain C, Structure Of The Human Mcad:etf Complex
 gi|49259284|pdb|1T9G|D Chain D, Structure Of The Human Mcad:etf Complex
          Length = 396

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 52  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 111

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 112 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 158

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 159 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 218

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 219 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 276 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 329 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 388


>gi|254238116|ref|ZP_04931439.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719]
 gi|126170047|gb|EAZ55558.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719]
          Length = 596

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 169/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +   +L     
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAVASEALQGRAVLAPLAE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|77460169|ref|YP_349676.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77384172|gb|ABA75685.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 385

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 135/377 (35%), Gaps = 22/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P  + W+K    P  H + R++   GL        F  +    ++ I AA  +   
Sbjct: 20  HEINPHVDEWEKAGRFP-IHEIFRKAGDLGLLGISKPEKFGGMGLDYSYSIVAAEEFGTI 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +     T     AL            +  S E       P         +G++E
Sbjct: 79  HCGGIPMSIGVQTDMCTPAL-----------ARFGSDELREEFLRPAITGEQVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A + +  +K  D         W  +SP +D   +LA             ++  
Sbjct: 128 VGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFICLLANTSDDKPHINKSLIMVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            +  G+      +K+G RS+ T ++ F N        +     G +  M       L  A
Sbjct: 188 MNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIGHEGAGFMMQMLQFQEERLFGA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + G+   +   I Y + R   G  LID  V+   +A++  +I    AL ++    + 
Sbjct: 248 ANMIKGLEYCVDSTIEYCKERKTFGNALIDNQVIHFRLAELQTEIECLRALVYQATEQYV 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  +        +A + K    ++   V    ++  GG G++ +  +AR YR+    S
Sbjct: 308 KGQDVTR-------LASMAKLKAGRLGREVSDSCLQYWGGMGFMWDNPVARAYRDVRLVS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +  L+
Sbjct: 361 IGGGADEIMLGIICKLM 377


>gi|225791074|gb|ACO31278.1| PtmO4 [Streptomyces platensis]
          Length = 388

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 137/376 (36%), Gaps = 31/376 (8%)

Query: 89  PGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  E W++  +    AW A    +   GL    +   F     +           + A  
Sbjct: 27  PHAEEWEQAGIVSREAWSA----AGAAGLIGWEFPEEFGGQGIRDFRYNAIMAEEMAATG 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G  +              T      W P I S                   L L+E  
Sbjct: 83  TVGIGLGLQNDVLPSYLSHLTEEQQHRWLPGIVSG-------------RTICALALSEPD 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+AA+ +  ++  D  Y LSG K F+++ + +D  I+  + +       +  L+ + 
Sbjct: 130 AGSDLAAMRTTARREGDH-YVLSGQKTFITNGILADFVIVACKTDPDARHKGISLLVVER 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G ++  T EL F +       LLG        + +      +  A+
Sbjct: 189 GMPGFERGRRLDKVGLKAQDTAELFFHDVRVPAANLLGAEGRGFAYMMENLPTERIAIAV 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++ G + +   A+ YA+ R   G  +      + A+AD+   + AA         +  E
Sbjct: 249 SALGGAQRAFELALEYAKTRTAFGQPIGTFQANRFALADMRAKLDAARTYVDGCIMALVE 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + +AA A       KYW  + A  +I   ++  GG GYI E  IAR +R++    I
Sbjct: 309 GHLTAVDAAAA-------KYWTTETAWQIIDRCVQLFGGYGYINEYEIARIWRDNRIERI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 362 FGGTSEIMQEIVGRSL 377


>gi|226940974|ref|YP_002796048.1| isovaleryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226715901|gb|ACO75039.1| Probable isovaleryl-CoA dehydrogenase [Laribacter hongkongensis
           HLHK9]
          Length = 388

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 23/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    PA   L  +    GL       +         AH +    +   +   
Sbjct: 29  PRAADIDRTNQFPA--DLWPKFGDMGLLGITVAEADGGSGMGYLAHIVAMEEISRASASV 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + P + +              +    L ++E   
Sbjct: 87  ALSYGAHSNLCVNQIRRHGTAAQKARYLPGLIAG-------------TRIGALAMSEPNA 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +   D         W  +   +D  ++ A+ +   G   +   + +   
Sbjct: 134 GSDVVSMKLRAEAAGDRFILNGSKMWITNGGDADVLVVYAKTDPAAGPRGITAFIVEKGM 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G  +    +K+G R + T  L F N        L    G V  +   +  + A+++   
Sbjct: 194 PGFSHGPKLDKLGMRGSNTYPLFFDNVDIPAENVLGSVGGGVNVLMGGLDYERAVLAAGP 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L  A  Y   R   G  + D  +M+  +AD+ + ++A+ A  + +  + D   
Sbjct: 254 LGIMQACLDVAEPYLAERQQFGQPIGDFQLMQGKLADMYVTLSASRAYVYAVGRALDAG- 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +    R  A     +  + A  +  +A++C+GG+GYI +    R  R++    I  
Sbjct: 313 ---YQGRSVRKDAAGAILYAAENATRLALDAIQCLGGNGYINDYPAGRLLRDAKLYEIGA 369

Query: 445 GSGNAMVLDVLNLLE 459
           G+       +   L 
Sbjct: 370 GTSEIRRWLIGRELM 384


>gi|170690198|ref|ZP_02881365.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144633|gb|EDT12794.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 377

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 140/396 (35%), Gaps = 35/396 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q + R A  +        P   +WD+    PA   ++R+    G    I    +    
Sbjct: 7   EEQRMIRDAARDFAT-ERLAPNAAQWDRDAQLPA--DVVRQMGELGFLGMIVPPQWGGSY 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTN 187
                   A             LMS   +     +    +      +   + +       
Sbjct: 64  TDYVAYALALEEIAAGCAACATLMSVHNSVGCGPILNFGSDAQKDRYLQDLATG------ 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIML 246
                         LTE + G++   + ++   + DG + LSG K F+++   +D  I+ 
Sbjct: 118 -------RRIGAFCLTEPQAGSEANNLRTRAV-LRDGKWILSGSKQFVTNGARADIAIVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A  +   G   +   +      G    + ++K+G R++ T  +   +       + N+  
Sbjct: 170 AVTDPDRGKRGLSAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCAVP---EANLLG 226

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P E ++I L  L+   + ++   V +       A  YA  R   G  L D   +   +A
Sbjct: 227 EPGEGLRIALSNLEGGRIGIAAQAVGIARAAFDAARAYASERMQFGKALKDHQTIANMLA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  + AA  L    A      +    E       A   K +  +MA  + + A++  G
Sbjct: 287 DMATRLNAARLLVHHAARLRSAGEPCLSE-------ASQAKLFASEMAEQICSNAIQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 340 GYGYLEDYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|163760237|ref|ZP_02167320.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162282636|gb|EDQ32924.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 382

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 136/373 (36%), Gaps = 25/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K E  P        ++               + R  A  +  A    MA    
Sbjct: 26  PFAAQWEKEEAIPRGVLEEAAALGLAAIYVPEADGGSGLTRLDATLVFEALS--MACPSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+A   +  +     P + +              +      LTE   G
Sbjct: 84  ASFLSIHNMCAWMIASYGSDEIKARLLPDLVTM-------------NKIASYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++ ++ ++G        +      SD ++++ +  G  G   +  ++ +    
Sbjct: 131 SDAAALRTRAERTNEGYKLNGAKAFISGGGFSDLYLVMTRT-GADGPKGISAVIVEDRTA 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   +NK+G RS  T +++F +       LLG+                L+ A  ++
Sbjct: 190 GLSFGAPENKMGWRSQPTSQVQFDDCLIPADNLLGEEGAGFRYAMSGLDGGRLNIAASAL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G + +L + + Y   R   G  +     ++  +AD+  ++ AA     + A+  D    
Sbjct: 250 GGAQSALDKTLTYMGERQAFGKPIDQFQALQFRLADMETELQAARIFLRQAASKLDRKAP 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A     + K +    A  V  +A++  GG GY+ +  I +  R+   + IL G
Sbjct: 310 D------ATKFCAMAKRFVTDTAFNVANDALQLHGGYGYLADYGIEKIVRDLRVHQILEG 363

Query: 446 SGNAMVLDVLNLL 458
           +   M + V   L
Sbjct: 364 TNEIMRVIVSRAL 376


>gi|332235166|ref|XP_003266778.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 424

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 122/379 (32%), Gaps = 25/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  E  D+           ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAEEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+   +Y            +       
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKVRKWKY------------LLSVACCH 166

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E    +D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 167 EPNVCSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 226

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 227 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGVYVLMTGLDLERL 286

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 287 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 346

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + DE    +++             +  + A  V  + ++C GG+GYI +  + R  R++ 
Sbjct: 347 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAK 399

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+     L +   
Sbjct: 400 LYEIGAGTSEVRRLVIGRA 418


>gi|109008502|ref|XP_001101274.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 3 [Macaca mulatta]
          Length = 421

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL       +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNPHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNEQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   +  + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +LI+   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 413


>gi|187960098|ref|NP_001120800.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           b precursor [Homo sapiens]
 gi|119626805|gb|EAX06400.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_b [Homo sapiens]
          Length = 425

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 81  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 140

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 141 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 187

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 188 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 247

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 248 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 304

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 305 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 357

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 358 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 417


>gi|28870861|ref|NP_793480.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968854|ref|ZP_03396995.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301384100|ref|ZP_07232518.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302059174|ref|ZP_07250715.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302135012|ref|ZP_07261002.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28854110|gb|AAO57175.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926457|gb|EEB60011.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|331019250|gb|EGH99306.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 383

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N      G L   
Sbjct: 170 FAVTDPELGKKGLSAFLVPTDNPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAAGLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|195998421|ref|XP_002109079.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens]
 gi|190589855|gb|EDV29877.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens]
          Length = 420

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 128/379 (33%), Gaps = 27/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     ++ +  P    LL      G         +          +  A      
Sbjct: 61  EKIAPRVREMEETKMFP--KDLLEEVGKLGWFGFRIPPEYGGSGGSLFQLLLIAEEVCKV 118

Query: 145 QLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                      +  ++ ++    +    +++ P+I    +                + L+
Sbjct: 119 DPGFSSCFGYQNTLTSKIILGYASEEQKQEYLPRIAKGMFT--------------SVCLS 164

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  ++ ++     D         W  ++  +D ++++A      G   +   + 
Sbjct: 165 EPDSGSDAFSLQTRAVPDGDDYVINGRKLWITNAEKADLYLIMANAAPEQGYKGITCFIV 224

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDS 320
           D    GL   R + K+G    +   +   +        + NV  G       L    +  
Sbjct: 225 DAGTPGLSVPRNEQKMGLNIVSNCPVMLDDVRVPASNIIGNVGGGYKIMANALTDGRIGI 284

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   + G +  L  AI Y   R   G  L D   M+  IA   +++ AA  L +  A   
Sbjct: 285 AAQVIGGAQGVLDIAIPYVMERKQFGKRLFDFQAMQHQIAQATVEVTAARLLYYNAAKLL 344

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+     +EA+ A       KY+  ++A  V  + ++ +G  GY++E  + +  R+  A 
Sbjct: 345 DQKLPSVKEASMA-------KYFATEVACQVCIQGIKWLGALGYMKEMPVEKFLRDLVAA 397

Query: 441 SILLGSGNAMVLDVLNLLE 459
           +I  G+ N  +  +   L+
Sbjct: 398 TIYEGTSNIQLNTIAACLK 416


>gi|4557235|ref|NP_000009.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           isoform 1 precursor [Homo sapiens]
 gi|1703068|sp|P49748|ACADV_HUMAN RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=VLCAD; Flags: Precursor
 gi|790447|emb|CAA60253.1| very-long-chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|1008852|gb|AAA79002.1| long chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|1235728|dbj|BAA07781.1| very-long-chain acyl-coenzyme A dehydrogenase [Homo sapiens]
 gi|12653261|gb|AAH00399.1| Acyl-Coenzyme A dehydrogenase, very long chain [Homo sapiens]
 gi|15277725|gb|AAH12912.1| Acyl-Coenzyme A dehydrogenase, very long chain [Homo sapiens]
 gi|261858126|dbj|BAI45585.1| acyl-Coenzyme A dehydrogenase, very long chain [synthetic
           construct]
 gi|1588724|prf||2209319A very-long-chain acyl-CoA dehydrogenase
          Length = 655

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 353 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 407

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 408 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|237803570|ref|ZP_04591155.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025552|gb|EGI05608.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 383

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 142/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ R    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPYAQAWEKA----GWIDDALVARLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YVDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNFGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                    V     LTE   G++   + ++ +   D  + ++G K F+S+   ++  I+
Sbjct: 119 --------RVIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAELAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  S+        L   
Sbjct: 170 FAVTDPELGKKGLSAFLVPTINPGFVVDRSEHKMGIRASDTCAVTLSDCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGL--AIALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I AA  L+   A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINAARLLTLHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|281363737|ref|NP_611409.2| CG7461 [Drosophila melanogaster]
 gi|272432560|gb|AAF57579.2| CG7461 [Drosophila melanogaster]
          Length = 627

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 162/413 (39%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 268

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 269 PEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 325

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 326 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 386 LEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTN 438

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 439 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 498

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 499 GELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAMV 551


>gi|332973086|gb|EGK11021.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 591

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 149/406 (36%), Gaps = 45/406 (11%)

Query: 95  DKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +++E H   H   LL+++   GL  +    ++  +   +            A+  A    
Sbjct: 52  EEIENHNFDHTVRLLKQAGELGLLGADVPENYGGLGLDKVSSSLITEKIAPARSFALSHG 111

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        +         + + P + S E                   LTE   G+D  
Sbjct: 112 AHVGIGTLPIVFFGNKEQKEKYLPPLASGE-------------KFAAYALTEPGSGSDAL 158

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              +  +   DG  Y L+G K W  +S  +D F++ A+V+G          + +    G+
Sbjct: 159 GAKTVAKLSEDGKHYILTGEKQWITNSAFADVFVVYAKVDGEK----FTAFIVEKEFPGV 214

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
                + K+G + ++T  L        +   L  V  G +    IL        +  V  
Sbjct: 215 STGPEEKKMGIKGSSTRTLILDEARVPVENVLGEVGKGHLIAFNILNIGRYKLGVGCVGS 274

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + ++  +  YA+ R      +   P+++  +A ++    A  ++ +RLA  F++  +  
Sbjct: 275 SKRAIEISAKYAKERKQFKTPIAQFPLIQEKLATMSAKTYALESVIYRLAGFFEKGLAHL 334

Query: 388 E-----EAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           E     EAA A         I K +  ++   V+ E ++  GG G+++E  I   YR+S 
Sbjct: 335 EQAEGTEAAKAIAEYALECSIAKVFGSEVLDYVVDEGVQIHGGYGFMQEYEIENMYRDSR 394

Query: 439 ANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTL 472
            N I  G+     L +            L  LEK   L E+L   +
Sbjct: 395 INRIFEGTNEINRLLIPSTLMRKTMKGELPFLEKAAGLQEELMMMM 440


>gi|330467508|ref|YP_004405251.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810479|gb|AEB44651.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 382

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 139/378 (36%), Gaps = 34/378 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-------VRKQAHKIRAARLYLMAQL 146
            ++     A     R ++  G+   + D  F  +            H      L  + + 
Sbjct: 20  VNREVVPHAATWDRREAVDPGIVGKLGDVGFLGLTIDEEYGGSGGDHLAYCLVLEELGRG 79

Query: 147 EAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           ++      SV+    A  +A   T    + W P + S              +      LT
Sbjct: 80  DSAVRGIVSVSLGLVAKSIATHGTREQREQWLPALCSG-------------TALGCFALT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D AA+T++  +  D         +  +   +D  ++ A+  G  G   +   L 
Sbjct: 127 EPDSGSDAAALTTRAVRDGDDWLLTGRKTFITNGTTADVALLFART-GGPGHRGITAFLV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDS 320
                GL    +K K+G R  AT EL            L     G    +  L    +  
Sbjct: 186 PTDSPGLSRSEIKGKLGLRGQATAELVLDGVRVPDTARLGECGAGFRLALGTLAKGRMSV 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   +  L  A+ YA  R   G  +    ++++ +A IA+D AAA  L +++A+  
Sbjct: 246 AAGCVGIAQGCLNAAVDYAGARTQFGKPIAGHQLVQQLLARIAVDTAAARLLVWQVADLI 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  + EA+ A       K +  + A     +A++  GG GYI+E  + ++ R++   
Sbjct: 306 DRGQPYATEASMA-------KLFASEAAVRAANDAIQVFGGYGYIDEYPVGKYLRDARVT 358

Query: 441 SILLGSGNAMVLDVLNLL 458
           ++  G+     L +   L
Sbjct: 359 TLYEGTSQIQQLLIGRAL 376


>gi|126436719|ref|YP_001072410.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126236519|gb|ABN99919.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 380

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 128/354 (36%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   GL    +D  +  + VR        +    +       L   +      +  +TT 
Sbjct: 46  AGEHGLIGWEFDEKYGGLGVRDFRFNQIISEEMFLTGSVGIGLGVQNDILMPYLNHLTTD 105

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                W PK  S EY                + ++E   G+D+A I +  +   D     
Sbjct: 106 EQKARWLPKFVSGEY-------------IGSIAMSEPAAGSDLAGIKTTARDEGDHWVV- 151

Query: 229 SGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+S+ +    ++ A + +       +  L+ +    G    R  +KIG  S  T 
Sbjct: 152 NGQKTFISNGLLSKLVLTAVKTDPSARHKGISLLMIEDGMEGFTRGRKLDKIGQYSADTA 211

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F +       L+G+LN     +        +  A  ++   R +L     YA  R  
Sbjct: 212 ELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACYALPAARRALDLTKAYALERTA 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    V +  IA++   + AA     +   S ++     ++AA  +        W 
Sbjct: 272 FGQPIGKFQVNRHFIAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDAAGLKW-------WT 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   +I   ++  GG GYI E  +AR +R+S    +  G+   M   +   +
Sbjct: 325 SEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIMKDLMGRAM 378


>gi|301346789|ref|ZP_07227530.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB056]
 gi|301597822|ref|ZP_07242830.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB059]
          Length = 372

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 132/372 (35%), Gaps = 29/372 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAM 450
              I  G+   M
Sbjct: 358 IQRIYGGTNEIM 369


>gi|146101225|ref|XP_001469060.1| acyl-CoA dehydrogenase [Leishmania infantum]
 gi|134073429|emb|CAM72157.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5]
          Length = 412

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 139/355 (39%), Gaps = 26/355 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDW 174
           +   +PVV K+A       +   A LE         +++    +    A+  T  V    
Sbjct: 54  EGKMDPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTL 113

Query: 175 APKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
              IF   + +       P           LTE   G+D  A+ ++ +K           
Sbjct: 114 VNNIFFNFANDAQRRKYLPKLAKDTVGCFCLTEAGSGSDAFALNTKAEKKGSKWVINGSK 173

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELE 290
            +  +   +  F+++A V+   G   +   + D S   G+   R +NK+G R+++T EL 
Sbjct: 174 LYITNGGWAGIFLVMATVDPSKGYKGITCFVVDSSETPGVSVVRTENKLGIRASSTAELR 233

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHV 344
             N       + NV     +  KI I  L+   + +    + +A+      + Y  +R  
Sbjct: 234 LENVEVP---EENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   M+   A+ A+++ AA  + +  +      +   ++AA A+  A +     
Sbjct: 291 FGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMAKYFASVV---- 346

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              A    + A+E  GG G++++  + R YR++   +I  G+    +  +  +++
Sbjct: 347 ---AEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGTSIIQLQTIAKMIK 398


>gi|160332360|sp|P48818|ACADV_BOVIN RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=VLCAD; Flags: Precursor
 gi|74267810|gb|AAI03105.1| ACADVL protein [Bos taurus]
 gi|146231822|gb|ABQ12986.1| acyl-Coenzyme A dehydrogenase, very long chain isoform 1 precursor
           [Bos taurus]
 gi|296476717|gb|DAA18832.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
          Length = 655

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/471 (18%), Positives = 171/471 (36%), Gaps = 56/471 (11%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALM 165
           ++     G            V        R   +  M  L     L +        + L 
Sbjct: 133 MQGLKELGAFGLQVPNELGGVGLCNTQYARLVEIVGMYDLGVGIVLGAHQSIGFKGILLF 192

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    + + PK+ S E                   LTE   G+D A+I S       G 
Sbjct: 193 GTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRSSAVPSPCGK 239

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K ++S+   +D F + A+              +   + + S  G+ +   + K
Sbjct: 240 YYTLNGSKIWISNGGLADIFTVFAKTPVTDTATGAVKEKITAFVVERSFGGVTHGPPEKK 299

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G +++ T E+ F           NV        K+ ++ L++    ++          +
Sbjct: 300 MGIKASNTAEVYFDGVRVPA---ENVLGEVGGGFKVAMHILNNGRFGMAAALAGTMKGII 356

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +       
Sbjct: 357 AKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD------ 410

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L
Sbjct: 411 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL 470

Query: 453 DVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSI-------------SLC 494
            V     ++KG  L   L + L+   G++G    +    LR                   
Sbjct: 471 FVALQGCMDKGKELSG-LGNALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIVHQEL 529

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                LA    E+ A    A  L +   + I + FL  R  D+    + M+
Sbjct: 530 SRSGELAVQALEQFATVVEAK-LIKHKKDIINEQFLLQRLADSAIDLYAMV 579


>gi|228968120|ref|ZP_04129124.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228791555|gb|EEM39153.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 588

 Score =  254 bits (650), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 41  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 92

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 93  AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 139

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 140 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 197

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 198 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 255

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 256 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 315

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 316 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 375

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 376 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 435

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 436 MMMMPEEVGDEPLALQKYL 454


>gi|171059219|ref|YP_001791568.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170776664|gb|ACB34803.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 596

 Score =  254 bits (650), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 93/498 (18%), Positives = 191/498 (38%), Gaps = 68/498 (13%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW---DKVEFHPAWHALLRRS 110
               LE  G        +E A++       L+  G     W     V     +    R  
Sbjct: 25  ALPGLEDAGYDTAVAVLEECAKLNEQVIAPLNRAGDIAPSWFKDGVVTTTAGFKEAFRAF 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TP 168
              G         F      +   I AA + ++        + P +T  ++ AL+T  + 
Sbjct: 85  AEGGWQGLHHPDEFGGQGLPK--LIHAACIEMINSANLSFALCPLLTDGAIEALLTAGSD 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                + P++    +  T             + LTE + G+D+AA+ ++ +   DG Y +
Sbjct: 143 AQRTTYLPRMIDGSWTGT-------------MNLTEPQAGSDLAAVRTRAEPQPDGTYKI 189

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
            G K F++    D       ++LA+V G       +  F+VP+ + +     G  N +  
Sbjct: 190 FGTKIFITYGEHDMAENIVHLVLARVVGAPEGVKGISLFVVPKFMVNADGSLGERNDVHC 249

Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             +++K+G +++ T  L+F +     G L+G  N     +  M         +  ++   
Sbjct: 250 VSIEHKLGIKASPTAVLQFGDHGGAVGQLIGQENRGLEYMFIMMNAARFAVGVQGIAVAE 309

Query: 330 VSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALS------F 374
           ++  +A+ YAR R  S            +I  P ++R ++ +        AL+      +
Sbjct: 310 MAYQKAVAYARDRVQSRPVDGSVAGSAAIIHHPDVRRMLSTMRAYAEGCRALALVSAAAY 369

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             ++S  + ++R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A+ Y
Sbjct: 370 DASHSHPDPEARQQNQAFYEFMVPLIKGFSTEMSLEVTSLGVQVHGGMGFIEETGAAQFY 429

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISL 493
           R++   +I  G+      D++                  +D G + + +   +    I+L
Sbjct: 430 RDAKILTIYEGTTAIQANDLVG-------------RKTARDGGRTARAIAAQIELTEIAL 476

Query: 494 CKEDKGLARFLTEKIALA 511
              D   A+   ++++ A
Sbjct: 477 ASHDSAAAQAFAKRLSAA 494


>gi|111026859|ref|YP_708837.1| isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825398|gb|ABH00679.1| possible isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score =  254 bits (650), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 130/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLE 147
           P     D+ E  P        +   GL        F           I    L  +    
Sbjct: 27  PLAAEIDREERFP--RESWEAAAELGLLGIRAPEQFGGSDLGLTETCIAGEELSAVCMST 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  ++  S      +    TP     + P +                S+   L +TE   
Sbjct: 85  AVTVLHQSNLVVDRIVDHGTPEQQARYLPGLCDG-------------SIIGCLAITEPEA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ ++  +   G        +  + P++D  ++ A+  G V    +     D + 
Sbjct: 132 GSDAMSMRTKATRTEGGWLLNGAKTFITNGPVADLALVYAKT-GPVEDRELALFAVDTTA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R  +K+G R + T EL FS+ F     ++G +      + D      +      
Sbjct: 191 PGFSKGRKLDKLGWRGSPTGELAFSDCFVPDDAVIGGIGNGIKVLRDGLASERVLMGAQG 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +L EA+ YA  R   G  + D  +++  IAD+ + I    AL  + A + D   
Sbjct: 251 VGLAAGALREAVRYAGERRQFGRPIGDFQLIQAKIADMYVGIELGRALVSKTAAAIDAGD 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                 +    +A   K    ++A     EA++  GG GY  E  + R+ R++    I  
Sbjct: 311 ------SGLTRLASACKLHGSEVAMNAALEAVQIFGGYGYTREFPVERYLRDAKIMQIGG 364

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     + +   + +
Sbjct: 365 GTSEIQRIIIGREMLR 380


>gi|319764065|ref|YP_004128002.1| isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|330823660|ref|YP_004386963.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118626|gb|ADV01115.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|329309032|gb|AEB83447.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 390

 Score =  254 bits (650), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R +  + +PA   ++ +    GL   +    +  +        +         +  
Sbjct: 32  PHVHRLEHDDVYPA--DIVEKMREMGLFGCLIAPEYGGLGLSTTTYAKIIERMSRVWMSI 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++  +  A  V    T    +++ P+  + E             +  G+GLTE   G
Sbjct: 90  SGIVNSHLIMAMAVQRAGTEAQKREFLPRFATGE-------------LRGGVGLTEPDAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           TD+ AI +  ++  D         W  +S   +   +L + + +       +  L+ +  
Sbjct: 137 TDLQAIRTVARREGDHYVVNGSKMWITNSMYGNCLALLVKTDPKAEPRHKGMSLLIAEKG 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
             G    +   K+G +   T  L F N        + G        V     L  ++ A 
Sbjct: 197 -EGFIVSKKLEKLGYKGIDTCALSFENYRVPADRLVGGVEGKGLQQVLGGLELGRINVAA 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   + +L EA+ YA+ R   G  + +   ++  + ++A    AA  L +  A +FD 
Sbjct: 256 RGLGIAQAALEEAVAYAQVRKTFGKPIAEHQAIQLKLGEMATRTQAARLLVYAAAEAFDR 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       KY+  +       EAM   GG GY +E ++ R YR++P   I
Sbjct: 316 GERCDMEAGMA-------KYFATEAGQENALEAMRIFGGYGYSKEYNVERLYRDAPLLLI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 369 GEGTNELQRMIIAKQL 384


>gi|126740732|ref|ZP_01756418.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126718247|gb|EBA14963.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 383

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 124/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               +++   GL C      +  V     H+         A L +      S   A  + 
Sbjct: 44  RETWQQAGELGLLCPSIPEEYGGVGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W PK+ S E             +   L +TE   G+D+  I ++  +  +
Sbjct: 104 EYGTEEQKKRWLPKMISGE-------------LVGALAMTEPSTGSDVQRIKTKALREGN 150

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGN 281
             Y LSG K F+++      I + A+ +   G   V  + +E     G    R   K+G 
Sbjct: 151 A-YRLSGQKTFITNGQHANLILVAAKTDPSQGSKGVSLVAVETDGAEGFSRGRNLEKVGL 209

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F N        L      G  + M+ L    L  A  +V  M  ++   I 
Sbjct: 210 HAADTSELFFDNVEVPPENILGQEEGKGFYQMMQQLPQERLIIACGAVGAMEGAVERTIA 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  + +       A           DE  +           A
Sbjct: 270 YCKEREAFGGPLTQFQNTRFKLVECLTKTRVARTF-------LDECMAEHLRGELTVEKA 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW       V+ E ++  GG G+++E ++A  + ++    I  G+   M   +   
Sbjct: 323 AMAKYWTTDTQGEVLDECVQLHGGYGFMQEYAVAEMWADARVQRIYGGTNEIMKELIGRS 382

Query: 458 L 458
           L
Sbjct: 383 L 383


>gi|116053335|ref|YP_793659.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588556|gb|ABJ14571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 596

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 168/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E    S   +    L   + 
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAAASEALQGRAALAPLVE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|290985718|ref|XP_002675572.1| acyl-CoA dehydrogenase family member [Naegleria gruberi]
 gi|284089169|gb|EFC42828.1| acyl-CoA dehydrogenase family member [Naegleria gruberi]
          Length = 315

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 62/319 (19%), Positives = 118/319 (36%), Gaps = 23/319 (7%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M  +     ++       M+    +    + + P + S E                   L
Sbjct: 1   MGDVSTTAYLTIHNMCCWMIDQYGSINQKEKYLPSLCSME-------------TMSSYCL 47

Query: 203 TEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           TE   G+D  ++ +  +       + LSG K F+S    SD ++++A+V        +  
Sbjct: 48  TEPNSGSDAGSLRTIARTLDGGKTFTLSGEKAFISGGGNSDVYLIMARVMDNDKDLGITC 107

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IY 317
            + + +  GL + + + K+G  +  T  +   +        L  V  G    M+ L    
Sbjct: 108 FIVEKNSEGLSFGKNEIKMGWNTQPTRAVIMDSVKVTSDNILGSVGEGFKIAMQGLDGGR 167

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           ++ A  SV G +  L  A  Y   R   G  L +   ++  +AD+A  + A+  +    A
Sbjct: 168 INIATCSVGGAQQCLNMAGEYLHTRKQFGKTLSNFQYLQFKLADMATRVHASRLMVRSAA 227

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                 KS    A        + K +       V+ ++++  GG GY+ E  + R+ R+ 
Sbjct: 228 TQLGIEKSSHSTA-----FCAMAKRFATDECFDVVNDSLQMFGGYGYLNEYGVERYLRDL 282

Query: 438 PANSILLGSGNAMVLDVLN 456
             + IL G+   M L    
Sbjct: 283 RVHCILEGTNEVMRLITSR 301


>gi|111017431|ref|YP_700403.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110816961|gb|ABG92245.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 133/395 (33%), Gaps = 37/395 (9%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR---K 130
             +  +  PQL  +       D++     W A    +   GL       ++        +
Sbjct: 19  GFVDKHVVPQLEKWDA-----DRLIDRETWLA----AGRQGLLGLPVPEAYGGPGELDYR 69

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               I+     + A        +      + +         + W P   + E        
Sbjct: 70  FRFVIQQEIARVGASALQSGFSTNDDIVLNYLLRHADEEQRRRWLPGFVTGE-------- 121

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
                    + ++E   G+D+ AI +      D  + ++G K F++S + +D  I+ A+ 
Sbjct: 122 -----TIGAIAMSEPAAGSDLRAIQTTAVADGD-TWVINGSKTFITSGILADIVIVFAKT 175

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
           +   G       + +    G    R  +K+G  +  T EL F +       LLG++    
Sbjct: 176 DVSAGSRGFSLFVVEDGTPGFSRGRKLDKLGLHAQDTAELFFEDVRIPKENLLGEVGSGF 235

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +     L  L   I +       L   + Y + R   G  + D   M   +A++   +
Sbjct: 236 AYLMQSLPLERLGIGIAAQVSAEAVLGWTLDYVKERTAFGKRIGDFQGMGFTLAELQTAV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             + A   R     +     + +AA A       K W  ++   VI   ++  GG GY+ 
Sbjct: 296 EVSRAYIDRCVREHNAGTLTAVDAAKA-------KLWATELQGRVIDAGVQFHGGYGYMM 348

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           E  +A+ Y ++    I  G+   M   +   L K 
Sbjct: 349 EYPVAKAYIDARIQRIYGGTNEIMKEIIHRDLMKA 383


>gi|57524955|ref|NP_001006136.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Gallus
           gallus]
 gi|53133792|emb|CAG32225.1| hypothetical protein RCJMB04_20f2 [Gallus gallus]
          Length = 614

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 89/552 (16%), Positives = 192/552 (34%), Gaps = 71/552 (12%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P        +   +L    +  +P + ++EL+ + ++V        A   +         
Sbjct: 27  PRPAYAKELFLG-ALRKEEVFPYPEISNEELQEINQFVGPIEKF-FAEEVDS-------- 76

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               ++ D+    P     L+     GL        +  +        R   +  +    
Sbjct: 77  ----KKIDQDAKIP--PETLKGLRELGLFGMQIPEEYGGLGLSHTMYARLGEITSLDGSI 130

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +        + +  T      + PK+ S E+                  LTE   
Sbjct: 131 AVTLAAHQAIGLKGILIAGTDEQKAKYLPKLASGEH-------------IAAFCLTEPGS 177

Query: 208 GTDIAAITSQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPR 260
           G+D A+I ++     DG Y        W  +  ++  F + A+      +G+V    +  
Sbjct: 178 GSDAASIQTRATLSEDGKYFLLNGSKVWISNGGLASIFTVFARTEIIEKDGQVKDK-ITA 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + +    G+   + ++K+G R + T E++F NT   +   L    G  +    +  L+S
Sbjct: 237 FIVERDFGGVTSGKPEDKLGIRGSNTCEVDFENTKVPIENVLGQIGGGFKVAMNI--LNS 294

Query: 321 AIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              S+           +     +A  R      L +  +++     +A+      ++++ 
Sbjct: 295 GRFSMGSASAGMIKKLIEMTAEHACTRKQFNKKLSEFGLIQEKFCFMAVKAYVMESMAYL 354

Query: 376 LANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A   D       S EAA         K +  + A A ++EA++ +GG GY+++    R+
Sbjct: 355 TAGMMDRPGFPDCSVEAAM-------VKVFSSEGAWACVSEALQILGGLGYMKDYPYERY 407

Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R+S    I  G+   + + +    +   G  L +++    + ++G + ++++  +RD+ 
Sbjct: 408 LRDSRILLIFEGTNEILRMYIALTGMQHAGKILTDKIKEIKKGNVGLALQELVNKVRDTT 467

Query: 492 SL------CKEDKGL--------ARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFL 535
                    +E  GL         + L E +    +     L R G   + +     R  
Sbjct: 468 GRKVDYGIMEERGGLVHPSLQDSGKKLEENVYYFGTTVRGLLTRFGKTIVDEQLALKRVA 527

Query: 536 DNCHSTHCMLHG 547
           D   + + M   
Sbjct: 528 DIVINLYAMTAA 539


>gi|119387185|ref|YP_918240.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377780|gb|ABL72544.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 381

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 148/406 (36%), Gaps = 31/406 (7%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   Q +  +A ++ T +     P    W++    P    L +++   G       
Sbjct: 2   DFALSEEQQAIFDLARDFGTAE---IAPQARAWEEAGTIP--RELWQKAAELGFGGVYVG 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                    +           MA    G  +S       M+    T      W P + S 
Sbjct: 57  EEHGGTGLSRLDATLVFEALAMACPSVGSFLSIHNMCGGMIDKFGTDANKARWLPGLCSM 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E                   LTE   G+D AA+ ++ +++  G + L+G K F+S    S
Sbjct: 117 E-------------KVFSYCLTEPGSGSDAAALRTRAERVEGG-WKLNGTKAFISGGSYS 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297
           D ++++ +  G+ G   +  ++ +    GL +  L++K+G ++  T +++F +       
Sbjct: 163 DCYLVMVRT-GQDGPRGISTMVVEAGTPGLSFGALEHKMGWKAQPTAQVQFDDCVIPEEN 221

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+                L+ +  ++ G + +L   + Y   R   G  L     ++ 
Sbjct: 222 LIGEEGRGFAYAMAGLDGGRLNISAGALGGAQAALDATLRYMGERRAFGQTLDQFQALQF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++   + ++     + A   D           A     + K      A  V  + ++
Sbjct: 282 RLAEMETALQSSRIFLRQAAWKLDRGDRD------ASKFCAMAKLHVTDRAFEVANQCLQ 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GY+ +  I +  R+   + IL G+   M L V   L    +
Sbjct: 336 LHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRLIVGRGLLAERD 381


>gi|281347020|gb|EFB22604.1| hypothetical protein PANDA_006042 [Ailuropoda melanoleuca]
          Length = 570

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 86/482 (17%), Positives = 169/482 (35%), Gaps = 52/482 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R D+    P  +  L +    GL        +  +        R   +  +    A  L
Sbjct: 35  QRIDREGRIP--NETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLGEIVGLDASIAVTL 92

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L         + PK+ S E+                  LTE   G+D+
Sbjct: 93  AAHQAIGLKGIILAGNKEQKARYLPKLASGEH-------------IAAFCLTEPSSGSDV 139

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDG 265
           A+I S+     D   Y L+G K W  +  M++ F + A+ E           +   + + 
Sbjct: 140 ASIKSRATLSEDKKHYILNGSKVWITNGGMANIFTVFAKTEVVDSDSSVKDKITAFIVER 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G+   + ++K+G R + T E+ F NT   +    NV        K+ +  L+S   S
Sbjct: 200 DFGGVTNGKPEDKLGIRGSNTCEVRFENTRVPI---ENVLGEVGGGFKVAMSTLNSGRFS 256

Query: 325 VSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +           +     YA  R      L +  +++   A +A       ++++  A  
Sbjct: 257 MGSTVAGMLKKLIEMTAAYACTRKQFNKSLGEFGLIQEKFALMAQKTYVMESMAYLTAGM 316

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+            I A + K +  + A   ++EA++ +GG GY+ +    R  R+S  
Sbjct: 317 LDQPGFPD-----CSIEAAMVKVFSSEGAWQCVSEALQVLGGLGYMRDYPYERLLRDSRI 371

Query: 440 NSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKED 497
             I  G+   + + + L  L+    +     + L+  ++ +  + V   LRDS+    + 
Sbjct: 372 LLIFEGTNEILRMYIALTGLQHAGRILTARVNELKSGNVSTVIETVGQRLRDSLGRTVDL 431

Query: 498 KGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTH 542
               +      ++A SA                 L R G   + +  +  R  +   + +
Sbjct: 432 GLTGKLGVVHPSVADSANKLEENVYYFGRTVETLLLRFGKTIVEEQMVLKRVANVLINLY 491

Query: 543 CM 544
            M
Sbjct: 492 GM 493



 Score = 37.6 bits (86), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 13/101 (12%)

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYW 403
            G  ++++ ++ + +A++ +++   TA+  R + S     ++   E   A I      Y 
Sbjct: 469 FGKTIVEEQMVLKRVANVLINLYGMTAVLSRASRSIRMGVRNHDHEVLLANIFCAEAYYQ 528

Query: 404 C-------CKMAPAVIAEAM-----ECIGGSGYIEERSIAR 432
                    K +P  + E +     + +    YI    + R
Sbjct: 529 NLFTLSQLDKYSPENLDEQIKKVSQQVLEKQAYICAHPLER 569


>gi|85859865|ref|YP_462067.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85722956|gb|ABC77899.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 383

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 141/401 (35%), Gaps = 28/401 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   + L  MA     +     P  ++WD+  + P +  +++     G   ++   
Sbjct: 2   DFALSEELEMLRSMARDFAAE--KIAPFADKWDEEHYFP-YEEVVKPMGELGFFGTVIPE 58

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        A  I    +   +      +    +  A  +    T    K +  K+ S 
Sbjct: 59  EYGGTNMGWLAAMILTEEISRASSALRVQINMEGLGCAYTIWKYGTEEAKKKYVQKLVSA 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY               G G+TE   G+D+ ++ S  +   D         W  ++  +D
Sbjct: 119 EY-------------LGGFGITEFNAGSDVMSMKSTAEDKGDYYLLNGSKTWISNANCAD 165

Query: 242 AFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             I  A  +       +     +  +  G+    L +K+G++S+ T E+   N       
Sbjct: 166 VIIYYAYTDKAAKGKGLSAFAVELKNNPGIRTTDL-DKMGSKSSPTGEIYLDNVKVPKEN 224

Query: 301 DLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L         V        L +A   +   +  L  AI YA  R   G  +      + 
Sbjct: 225 LLGKPGDGAKIVFGSLNGTRLSAAAGGIGLAQACLDAAIKYANEREQFGKPIGTFQANQF 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            I ++A ++ AA  + +R A   D+    +       +     KY   ++A      AM 
Sbjct: 285 LIGEMATELEAARLMVYRAAWQKDQGNLGN------TVETAQAKYLAGEVAYKCAIGAMR 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             G  GY  E  + R+YR++P  +++ GS N   + V   L
Sbjct: 339 IFGAYGYSTEYPVNRYYRDAPTYAMVEGSTNVCKMIVGGAL 379


>gi|163942725|ref|YP_001647609.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229135837|ref|ZP_04264606.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST196]
 gi|163864922|gb|ABY45981.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228647626|gb|EEL03692.1| Acyl-CoA dehydrogenase domain protein [Bacillus cereus BDRD-ST196]
          Length = 608

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 159/439 (36%), Gaps = 54/439 (12%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+L          ++ EF  +   LL+ +   GL  +     +  +   +      
Sbjct: 61  NEVLPELEYL-------EQHEFDRS-VRLLKEAGELGLLGADVPEEYGGIGLDKVSSALI 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +  A   A    +     +  + L       K + P + + E               
Sbjct: 113 AEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGE-------------KL 159

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D     +  +  ++G  Y L+G K W  +S  +D FI+ A+++G    
Sbjct: 160 AAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEH-- 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + +    G+     + K+G + ++T  L   +        L  +  G +    I
Sbjct: 218 --FSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNI 275

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L        + +V   + ++  +  YA +R      +   P+++  +A++A    AA + 
Sbjct: 276 LNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESS 335

Query: 373 SFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +R    F+            + K+ +   A   I   + K +  ++    + E ++  G
Sbjct: 336 VYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 395

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468
           G G++ E  I R YR+S  N I  G+     L V            L LL+K   L E+L
Sbjct: 396 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEEL 455

Query: 469 FSTLEQDLGSSGKKVITIL 487
              + +++G     +   L
Sbjct: 456 MMMMPEEVGDEPLALQKYL 474


>gi|332305102|ref|YP_004432953.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172431|gb|AEE21685.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 586

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 82/442 (18%), Positives = 155/442 (35%), Gaps = 48/442 (10%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V+    +    +  +  G         F               ++  A +        S 
Sbjct: 76  VQETAGFAQAYQEYVEGGWASLTGAEEFGGQNLPNVLGSAVNEVWHTANMAFALCPLLSQ 135

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   ++   +  + + + PK+ S E+  T             + LTE   GTD+AA+ +
Sbjct: 136 GAIESISHHGSEHLQQSYLPKMLSGEWPGT-------------MNLTEPDAGTDLAAVKT 182

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL--- 262
           +     D  Y +SG K F++            ++LA++         +  F+VP+     
Sbjct: 183 KAVPNGDH-YLISGQKIFITWGDHQMTDNIVHLVLARLPDAPAGVKGISLFIVPKFNLDE 241

Query: 263 --EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
             E G  N      L++K+G   + T  + F +     G+L+G+ +     +  M     
Sbjct: 242 NGEPGERNDAYCVSLEHKLGIHGSPTCVMSFGDNGGAKGYLVGEAHKGLSYMFTMMNHAR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATA 371
               +  ++    S   A+ YA+ R            ++  P ++R +  +     A  A
Sbjct: 302 QGVGLQGLAISEGSYQHALAYAKERLQGTNKDGSRFTIMKFPDVRRMLMQMKSSTEAMRA 361

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A   D   S     A + +  PI K WC +++  +     +  GG G++EE   A
Sbjct: 362 LCLVAAAEIDRGNS-----ARSELFTPIVKGWCTELSQELTYLGTQIHGGMGFVEETGSA 416

Query: 432 RHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLG--SSGKKVITIL 487
           + YR++   +I  G+     LD++    L        +L   +  DL   S+     T+ 
Sbjct: 417 QFYRDARILTIYEGTTGVQALDLVGRKTLVNQGESLGELLDEITADLAKFSAMGGQFTLA 476

Query: 488 RDSISLCKEDKGLARFLTEKIA 509
                   E    AR      A
Sbjct: 477 AKQCQAALECAVAARQWLLDTA 498


>gi|302343377|ref|YP_003807906.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639990|gb|ADK85312.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 383

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 139/381 (36%), Gaps = 37/381 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +R D  E         R     GL   I D ++        ++ I    +  +    
Sbjct: 26  PQAQRLDADEEFSM--ETFRAMGELGLFGMIVDEAYGGQGMDYISYIIAVEEIARIDGSH 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + + +      +    +      + P++ +                  G GLTE   
Sbjct: 84  AATVAAGNSLGIGPIFYYGSEEQKHKYLPELCAG-------------RALWGFGLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQV----EGRVGCFLVPR 260
           G+D     +      D  + ++G K F+++   P S    ++A+     +GR     +  
Sbjct: 131 GSDAGGARTTAVLDGD-SWLINGSKIFITNASTPASLGVTVMARTGVFPDGRP---ELSC 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIY 317
           +L +    G   + +  K+  R++ T EL F +        L         M        
Sbjct: 187 ILVENGTPGFEARPMHGKMMWRASNTSELYFEDCRVPATNILGQRGKGFHQMLATLDAGR 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L    M V G + +   A+ YA++R   G  +    V    +AD+A++I AA  L ++  
Sbjct: 247 LSIGAMGVGGAQGAYELALKYAKQREQFGRPIAAFQVNAFKLADMAMEIEAARLLLYKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +S S+ AA A       K +  ++   V  EA++  GG G + E  + R +R+ 
Sbjct: 307 WQKDNHQSFSKLAAMA-------KLYASEVMGRVATEAVQLHGGYGLMREYDVERFFRDQ 359

Query: 438 PANSILLGSGNAMVLDVLNLL 458
              +I  G+     L +  L+
Sbjct: 360 KLLTIGEGTSEVQRLVIARLI 380


>gi|148252257|ref|YP_001236842.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404430|gb|ABQ32936.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 379

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 145/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P   AL  ++   GL    +   F  V   Q   I A++    A    
Sbjct: 28  PFASAWDEAGEFP--RALYAKAAEIGLLGLGFPEEFGGVPADQFMHIVASQELARAGAGG 85

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                 S    A  +A    P V     P+I +                   L +TE  G
Sbjct: 86  VSASLMSHSIGAPPIARAARPEVRARVLPEILAG-------------RKISALAITEPSG 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A + ++  +  D  Y +SG K F++S M   +I +A   G  G   V  LL  G  
Sbjct: 133 GSDVANLRTKAVRDGDH-YVVSGEKTFITSGMRADYITVAVRTGGPGPSGVSLLLVPGDT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   +L NK+G  ++ T  L F         L+G+       +        +  A   
Sbjct: 192 PGLTRTKL-NKMGWWASDTATLHFDGCRVPIENLIGEEGQGFKLIMHNFNSERMGMAASC 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +  RV L +AI YA+ RH  G  L    V++  + D+A  +AA+ A+   LA   ++  
Sbjct: 251 TAFARVCLEDAIAYAKERHTFGKPLAQHQVIRHKLVDMAQRVAASQAMLEMLAWRLEQGD 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   E    +  A  T   C        +EA++  GG+G++    + R YRE   N+I  
Sbjct: 311 NPVAEICMMKNQATQTMACC-------ASEAVQIFGGAGFMRGIRVERIYREVKVNAIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       +
Sbjct: 364 GTEEIMKDLASRQM 377


>gi|110680481|ref|YP_683488.1| isovaleryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109456597|gb|ABG32802.1| isovaleryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 387

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 139/406 (34%), Gaps = 31/406 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +    +L    N     +H +      P     D+    PA   L R     GL     D
Sbjct: 4   AAMQFDLGEDTNALRDMVHRWAQERVAPLAAEIDEKNDFPA--DLWREMGELGLLGITVD 61

Query: 122 RSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             F        AH I    +   +   +    + S    + + L  T    + + PK+ S
Sbjct: 62  ERFGGAGMTYLAHTIVIEEIARASASVSLSYGAHSNLCVNQINLNGTAAQKEKYLPKLIS 121

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                         +    L ++E   G+D+ ++  + +K +D         W  + P +
Sbjct: 122 G-------------AHVGALAMSEAGAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPEA 168

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
              ++ A+ +   G   +   + +    G       +K+G R + T EL F +       
Sbjct: 169 ATLVVYAKTDPDAGAHGITAFIVEKEMAGFSTSPHFDKLGMRGSNTAELIFDDVEVPFEN 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG+       +        +  A +    M   +   + Y   R   G  +    +M+ 
Sbjct: 229 VLGEEGRGVAVLMSGLDYERVVLAGIGTGIMAACMDVVMPYLAERKQFGKPVGSFQLMQG 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+   + +A A  + +A + D      ++AA           +  + A     +A++
Sbjct: 289 KIADMYTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEEAMKQAHQAVQ 341

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +GG+G++ +   AR +R++    I  G+     + V   L     
Sbjct: 342 AMGGAGFLSDSPAARLFRDAKLMEIGAGTSEIRRMLVGRELMAAMA 387


>gi|262281607|ref|ZP_06059385.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262256983|gb|EEY75723.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 407

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 138/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +      
Sbjct: 49  PFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGVEMAKAGSG 106

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P I S E                 L +TE  
Sbjct: 107 GVHISLMVHTIGAPPIQHFGSEELKARVLPSIISGE-------------KISALAITEPS 153

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +    G   +  LL D
Sbjct: 154 GGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKSGAEGISMLLID 212

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 213 AQSEGITKTPLK-KMGWWASDTAHLHFDQVKVPASNLLGKENAGFKVIMNNFNMERFFLG 271

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A    
Sbjct: 272 VVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMT 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K +  E         + K    +        A++ +GG G++      R YRE   N 
Sbjct: 332 QPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 388

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 389 IGGGAEEIMKDLISKQL 405


>gi|297583445|ref|YP_003699225.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297141902|gb|ADH98659.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens
           MLS10]
          Length = 592

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/462 (16%), Positives = 163/462 (35%), Gaps = 46/462 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIR 136
               P+L       E  ++ EF  +   L++ +   GL        +  +   + +  I 
Sbjct: 45  EKVKPEL-------EFIEQHEFDRS-VRLMKEAGELGLLGVDVPEEYGGLELDKISSTII 96

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
             +  L       H     + S   +    T    K + P + + E              
Sbjct: 97  TEKFGLGGSFSLTHGAHVGIGS-LPIVYFGTEEQKKQYLPDLATGE-------------R 142

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254
                LTE   G+D  +  +  +   +G  Y L+G K W  ++  +D F++ A+++G   
Sbjct: 143 IAAYALTEPTSGSDALSAKATAKLNEEGTHYILNGEKQWITNAGFADVFVVYAKIDGEQ- 201

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
                  + +    G+     + K+G + ++T  L   +       LLG+         +
Sbjct: 202 ---FSAFIVEKDHEGVSVGPEEKKMGIKGSSTRTLILEDAVVPKENLLGEAGRGHVIAFN 258

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +  L      +  V G + ++  +  YA  R      +    ++++ +A++A    A  +
Sbjct: 259 ILNLGRFKLGVGCVGGAKRAVEISAAYANERKQFNMPISKFTLIQKKLAEMAAKTYALES 318

Query: 372 LSFRLANSFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +R A   D            + K   +  A   +   + K++  +    ++ E ++  
Sbjct: 319 TIYRTAGLIDKGFDELSDEQKKDGKLVGKAIAEYAVECSLNKFFGSEALDEIVDEGVQIH 378

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG+G++ E  I   YR S  N I  G+     + V   L K     +     LE+  G  
Sbjct: 379 GGNGFMMEYEIENMYRNSRINRIFEGTNEVNRMLVPGTLLK--MAMKGELPLLEKASGLQ 436

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
            + ++ +  +      E +       +KI L  +  A  + G
Sbjct: 437 EELMMMMPEEVGDEPLEQERYLLQNAKKIFLMIAGTAAQKYG 478


>gi|222055283|ref|YP_002537645.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564572|gb|ACM20544.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 380

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 147/405 (36%), Gaps = 38/405 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + + T ++ AR      P   +    GE   +V                GL   ++   
Sbjct: 9   RIAADTIRQAAR--ERIAPLAASIDATGELNQEVTT---------LLWDLGLMTLVFPAE 57

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSRE 182
                + Q   +  A   +     +  LM       S   L   +  +     P+I +  
Sbjct: 58  HGGAEQSQGTLLCTAVEEIARHCASSALMLIIQAVGSYPLLHGGSKELLDRVLPRIVAE- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD 241
                              ++E   G+D+  I +   +  +  Y +SG K F  + P++ 
Sbjct: 117 ------------RELAAYLVSEPGAGSDVGNIRTTAVRDGNH-YVISGTKCFSTNGPIAS 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            + +LA+     G   +   L +    G    +++ K+G R + T E+         G L
Sbjct: 164 FYTVLARTS-ENGRNGLTFFLVERDTPGFSVGKIEKKLGQRGSKTSEMYLDEVRVPVGNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+ N           +        ++     +  + + +AR R   G  L +  ++++ 
Sbjct: 223 LGEENKGFNLAMKDFDMSRPAIGAQALGIAEGAFDQMLRHARERKTFGQALCEHQMIQQI 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD A  I AA  L +R A  +D+ +  ++       +A + K +    A  +  +A++ 
Sbjct: 283 IADSATAIEAARGLVYRSAALYDQGQRNTK-------LASMAKLFASDAAMKITTDAIQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            GG GY+++  + R +R++    I  G+     L +   + K T 
Sbjct: 336 FGGYGYMQDYPVERMFRDAKLTQIFEGANQIQRLVIAREILKETA 380


>gi|154247194|ref|YP_001418152.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154161279|gb|ABS68495.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 596

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 107/558 (19%), Positives = 199/558 (35%), Gaps = 71/558 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
             L+     VV   LE  G++  S  A  L ++A+     L            V     W
Sbjct: 26  QGLVDLSFDVVDPVLEEAGKFAASVIA-PLDKVADKQGCTLKD--------GTVTTPEGW 76

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A        G      +  F       +        +  A    G     ++ +   + 
Sbjct: 77  RAAYEAWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPAFGIGGVLTMGAIEALT 136

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P + + +  K+ +  +  T             + LTE + G+D+AA+ ++  K +D
Sbjct: 137 AHGAPELQQTYLTKMVAGTWTGT-------------MNLTEPQAGSDLAALRAKAVKQAD 183

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSP 267
           G Y + G K F+S    D       ++LA++         +  FLVP++L +     G  
Sbjct: 184 GTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSFGER 243

Query: 268 NGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           N +    +++K+G   + T  + F        G+L+G+ N     +  M     L   I 
Sbjct: 244 NDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAVGIQ 303

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRL 376
            V+    +   A  YA+ R             +I  P +KR +  +  +  AA A+  + 
Sbjct: 304 GVAVAERATQRAFAYAKDRRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAICLKT 363

Query: 377 ANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A++ D A    +        A A ++ P+ K +   +   V +  ++  GG GY+EE   
Sbjct: 364 ADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDIGIEVASTGVQVHGGMGYVEETGA 423

Query: 431 ARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLF-------STLEQDLGSSGK 481
           A+H R++   +I  G+       L    L ++G ++   +        + +         
Sbjct: 424 AQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAPDFG 483

Query: 482 KVITILRDSI-SLCKEDKGLARFLTEKIALASSAAALY------RAGMNDIADVFLENRF 534
                L +++ +L +  + +  +L    A A + A  Y       AG   +A V L    
Sbjct: 484 HTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALAAYG 543

Query: 535 LDNCHSTHCMLHGRFNAA 552
                 T   L  R   A
Sbjct: 544 ERAAGGTDPRLAARIALA 561


>gi|94309684|ref|YP_582894.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93353536|gb|ABF07625.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 594

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/450 (18%), Positives = 177/450 (39%), Gaps = 53/450 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    R+    G    +    F      +   +      ++        + P +
Sbjct: 71  VTTTPGFSDAFRQFGEGGWQGVLHPSDFGGQGLPK--LVATPCNEMLNAANLSFALCPLL 128

Query: 157 TSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL+T  +    + + PK+ S E+  T             + LTE + G+D+AA+
Sbjct: 129 TDGAIEALLTAGSDAQKETFLPKLISGEWTGT-------------MNLTEPQAGSDLAAV 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLE 263
            ++ +   DG + + G K F++    D       ++LA+          +  F+VP+ L 
Sbjct: 176 RTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLL 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    +++K+G +++ T  L+F +     G L+G+ N     +  M   
Sbjct: 236 NADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNS 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDI 366
                 +  ++    +  +A+ +A+ R  S            +I  P +KR +  +   I
Sbjct: 296 ARFSVGMQGIAVSERAYQQAVAFAKERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALI 355

Query: 367 AAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             A ++++       +A+   +   R +  A    + P+ K W  +++  V +  ++  G
Sbjct: 356 EGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTELSIDVTSLGVQVHG 415

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGS 478
           G G+IEE   A+HYR++    I  G+      D++    +  G  +   + + + +   +
Sbjct: 416 GMGFIEETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAA 475

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKI 508
            GK          +  K+ +     + E +
Sbjct: 476 LGKHGGDAFTAVQAQLKQGREALEAVVEFV 505


>gi|83952431|ref|ZP_00961162.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83836104|gb|EAP75402.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 569

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 87/476 (18%), Positives = 170/476 (35%), Gaps = 50/476 (10%)

Query: 67  SCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +    E  RM       L         R +   V   P +    R     G      D +
Sbjct: 38  AAILGEAGRMCEEVLAPLQRAGDLTPARLENGVVRTSPGFAEGYRAIAEGGWVSIAADPA 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
              +    +       +   A L        +      +    +  + + + PK+ S ++
Sbjct: 98  HGGMGLPASLATAVNEMMSGACLSLQLSPLMTQGQIEALEHHASDEIKEVYLPKLVSGDW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   G+D+ A+ ++ +   DG Y ++G K F+S   +D  
Sbjct: 158 AGT-------------MNLTEAHAGSDVGALRTKAEPQGDGSYAVTGQKIFISWGDNDIT 204

Query: 243 ----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++ G       +  F+VP+ + D     G  N L    L++K+G   + T 
Sbjct: 205 ENVCHLVLARLPGAPEGTKGISLFMVPKYIPDEAGNPGQANDLRVVSLEHKLGLHGSPTA 264

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-- 345
            ++F    G+L+G+       +  M     L      +     +   A+ YA  R     
Sbjct: 265 VMQFDGARGWLIGEEGGGMKAMFTMMNNARLGVGGQGIGVAEAACQTALAYAEERVQGRS 324

Query: 346 ---GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAPIT 400
                 +I    ++R +A++  D  AA +++   A + D A +   ++ AA A  + PI 
Sbjct: 325 AGPEKAIIGHADVRRMLAEMRADTFAARSIALACAVAIDMAHATGGADWAARAAFLTPIA 384

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459
           K +  +    V    ++  GG G+IEE   A++ R+    +I  G+     +D++   L 
Sbjct: 385 KAFGTETGMRVAELGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDLVGRKLM 444

Query: 460 KGTNLFEQLFSTLEQ----------DLGSSGKKVITILRDSISLCKEDKGLARFLT 505
            G      +   +E           +L     +    LR+++        +     
Sbjct: 445 DGGEAAAAILDEIEAQAEAARAEMPELAEPVWQAAENLREAMEWMLAQGEMTERFA 500


>gi|15806554|ref|NP_295267.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6459305|gb|AAF11106.1|AE001998_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 422

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 139/382 (36%), Gaps = 32/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    P    +++     G+  +     +       A                
Sbjct: 58  PGAAERDQTGEFP--FEIVKELGAMGIMGAQTPEEYGGAGLDSATFAMIIEEIAAVDGSL 115

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + +  +    + + P + S                    GLTE   
Sbjct: 116 CLTVASHNSLCQGHILIGGSEEQKRKFLPDLAS-------------AQKLGAWGLTEPGS 162

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D   + S  ++  DG + L+G K F++   ++  +++LA+ +    G+     +   +
Sbjct: 163 GSDSGGMFSNAKEQPDGSWILNGSKNFITQGSVAGTYVVLARTDPAREGKGKNDGISAFV 222

Query: 263 EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
            +     G    R ++K+G RS+ T +L F +        L        + M++L    +
Sbjct: 223 FNRDEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFKDVMRVLDGGRV 282

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A M +   R +   A  YA  RH  G  +     +   +ADI   + AA  L  + A+
Sbjct: 283 GIAAMGLGLGRGAYEYAARYALGRHQFGKPIAYNQNIAFRLADIDTKLEAARLLIRKAAD 342

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  ++ +   A A       K +   +      EA++ +GG GYI+E  + R +R++ 
Sbjct: 343 LKDAGQNFTVPVARA-------KLYATVVGVEACDEAIQMLGGYGYIKEYPVERMWRDNR 395

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     L +   + K
Sbjct: 396 LTRIGEGTDEVQRLVISRDVLK 417


>gi|119713661|gb|ABL97712.1| acyl-CoA dehydrogenase [uncultured marine bacterium EB0_39H12]
          Length = 380

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 141/373 (37%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+   +P    +  +    G+     D  +  +        +   + +      
Sbjct: 27  PHVDEWDEAGKYP--QEINEKVCELGVFGFGIDEKYGGLGFDDQFMRKDVSVEM------ 78

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                   ++  + A + +  +      ++ + E        +        LG+TE  GG
Sbjct: 79  -----GRTSAGGLFASVGSRNIMLGPLTELANEEIKLKALPDLMSGKKGGSLGITEPGGG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +   +  +  + L+G K F++  M  ++ ++    G+ G   +     +    
Sbjct: 134 SDVAQMKTIAHRDGNE-WVLNGSKTFITGGMQASYFVIGARTGKEGLGGISLFFVEADTP 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     ++ K+G  ++ T  L F +       L+G+ N     + +             +
Sbjct: 193 GFTRSAIEKKMGWWTSDTATLYFDDCRIPADNLMGEENKGFYAIMNNFNYERYMMGAQML 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +    E + Y++ R   G  LI+  V++  +AD++  I A  A   ++A   ++ + 
Sbjct: 253 GMAKRCFEECVQYSQDRKTFGKSLIEHQVIRHKLADMSAKIDAMDAYLNQVAQLMNDGEM 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E           K++C +   ++ +EAM+  GG+GY+    + R YRE    +I  G
Sbjct: 313 PVAE-------ISKIKFFCSECLESIASEAMQIFGGAGYLRGNPVERIYREVKVMAIGGG 365

Query: 446 SGNAMVLDVLNLL 458
           S   M    +  L
Sbjct: 366 SKEIMKDLTVKQL 378


>gi|67970732|dbj|BAE01708.1| unnamed protein product [Macaca fascicularis]
 gi|90078130|dbj|BAE88745.1| unnamed protein product [Macaca fascicularis]
          Length = 421

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL       +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNPHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNEQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   +  + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +LI+   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 413


>gi|229591811|ref|YP_002873930.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229363677|emb|CAY51038.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 385

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 141/397 (35%), Gaps = 28/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   QEL R       +     P  + W+K    P  H + R++   GL        F  
Sbjct: 4   TQEHQELRRTVRAFVDR--EINPHVDEWEKAGRFP-IHDIFRKAGDLGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ I AA  +  +        +   +      +A   +  +  ++     S E  
Sbjct: 61  MGLDYSYSIVAAEEFGTVHCGGIPMSIGVQTDMCTPALARFGSDELRDEFLRPAISGEQ- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          +G++E   G+D+A + +  +K  D         W  +SP +D   
Sbjct: 120 ------------VGCIGVSETGAGSDVAGLKTHARKDGDDYVINGSKMWITNSPSADFIC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++   +  G+       K+G  S+ T ++ F          +  
Sbjct: 168 LLANTSDDKPHINKSLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFDGVRVPQRNRIGH 227

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A+
Sbjct: 228 EGAGFMMQMLQFQEERLFGAANMIKGLEHCIDTTIEYCKERQTFGKALIDNQVIHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++ +I    AL ++    + + +  +        +A + K    ++   V    ++  GG
Sbjct: 288 LSTEIECLRALVYQATEQYIKGQDVTR-------LASMAKLKAGRLGREVSDSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G++ +  +AR YR+    SI  G+   M+  +  L+
Sbjct: 341 MGFMWDNPVARAYRDVRLVSIGGGADEIMLGILCKLM 377


>gi|148265337|ref|YP_001232043.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398837|gb|ABQ27470.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 384

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 129/376 (34%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLE 147
           P     D  E  P    ++R+    GL       ++           +    +       
Sbjct: 26  PFARENDANERFPL--EIVRKLGARGLLGGTIPGAYGGAELDWISDGLIFEEIGRGCSSV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +         ++    +    + + P +   E             +     LTE   
Sbjct: 84  RTTVSVQVSLVEQVIFNWGSEAQRRSYLPGLCRGE-------------ILGCFALTEPGV 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A I +      DG        W  +  ++D  I+ A+     G   +   + D   
Sbjct: 131 GSDAAGIGATATPHGDGWLLNGTKNWITNGGVADIAIVFARTGPAAGNKGISAFIVDTKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G     ++ K+G R+++T  L F + F      L  +   ++    L  LD+    V+ 
Sbjct: 191 PGFSSLEIRGKLGLRASSTAALTFRDCFLPGDALLGETGAGLK--IALSALDNGRYGVAA 248

Query: 328 MRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +        + YARRR   G  +    +++  IA +A+D+AAA  L FR     + 
Sbjct: 249 GCVGIIQGCVDACVAYARRRQQFGRSIASFQLVQDMIARMAVDLAAARLLVFRAGELKNR 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S E         + KY+  + A     +A++  G  GY     + R+ R++   +I
Sbjct: 309 GAANSLE-------TSMAKYFASEAAVRAATDAIQVHGAYGYSNAHPVERYLRDAKVATI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 362 YEGTSQIQKLIIGEHL 377


>gi|228996565|ref|ZP_04156204.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
 gi|229004215|ref|ZP_04162016.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228757076|gb|EEM06320.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4]
 gi|228763197|gb|EEM12105.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17]
          Length = 405

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 140/384 (36%), Gaps = 39/384 (10%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N   P +  +   G    K+    A    +   I +       D +   +V ++  +  
Sbjct: 21  DNEIIPYIKEWDEKGHFEQKILKRLAELQFMGVCIPEQYGGVGMDYNTLAIVCEELERGD 80

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A  +  A      L S ++          T    + +                  K   
Sbjct: 81  TA--FRTAVSVHTGLNSMTLLQ------WGTEEQKQKYLVSQ-------------AKGEK 119

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255
               GLTE   G+D+ A+ +   K  D  Y L+G K ++S   ++D F++ A+    +  
Sbjct: 120 IGAFGLTEPNAGSDVVAMQTTAVKQGD-YYVLNGSKTWISLCDVADHFLIFAKTNSELKH 178

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314
             +   + + +  G+  + +K K+G R+  T E+             N+     E  KI 
Sbjct: 179 RGISCFIVERTFPGVSTKAIKGKLGIRAGNTGEVFLDEVKVPA---ENLLGEEGEGFKIA 235

Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +  LD+   +V+     L +A     + Y   R   G  +    ++++ IA ++ ++  +
Sbjct: 236 MASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSANLEIS 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L ++     +E K  + E + A+ +A       C  A     +A++  G  GY  E  
Sbjct: 296 RLLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGYSNEFP 348

Query: 430 IARHYRESPANSILLGSGNAMVLD 453
           + R+ R + A  I  G+     + 
Sbjct: 349 VERYLRNAKAPVIYEGTREIHTIM 372


>gi|167752047|ref|ZP_02424174.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216]
 gi|167660288|gb|EDS04418.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216]
          Length = 577

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 89/484 (18%), Positives = 171/484 (35%), Gaps = 60/484 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE          A   ++  P++          D V +       +      GL  
Sbjct: 55  LEIAGEVCG-EVIAPNAEGVDHEGPRVEN--------DHVVYAEGTARNIDAITKAGLSG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 ++ +       + A  +         ++       A  +    +  + + + P+
Sbjct: 106 MTLPYEYDGLNFPLVCFVVANEMVARGDAGFENIW-GLQDCAETLNEFASEELKRMFLPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLS 236
           + + E                 + LTE   G+D+ A+  +       G + L+G K F++
Sbjct: 165 VSAGE--------------TCAMDLTEPDAGSDLGAVMLKATYDEKSGRWLLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +      ++LA+ E        +  L+ D    G+  +R++NK+G + + T EL F+N  
Sbjct: 211 NGDGHISLVLARTEEGTSDARGLSMLVHDKRDGGVKVRRIENKLGIKGSPTCELVFTNAP 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L+GD  +     V  +     L     SV     +  EA+ YA+ R   G  +I    
Sbjct: 271 ARLVGDRKMGLIKYVMSLMNAARLGIGAQSVGLCEAAYREALKYAQERAQFGKPIIQFAA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----------------YARIMA 397
           +   ++++   +  A AL +      +  K     A                   A    
Sbjct: 331 VAEMLSNMKAKLQGARALLYETTRFVEIYKQYGHIAQERSLEPEERQEMKFYNRLADGFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K +  + A  +  +A++  GGSG++++    R YR++   +I  G+    V+  +N 
Sbjct: 391 PLVKLFASEYANQLAYDAVQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINA 450

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---------------AR 502
           + KGT   EQ+ +    D       V + L D     +E                   AR
Sbjct: 451 VTKGT-FLEQIKTYEAADYAPEMCAVKSKLTDLRVRFEEMVARVETLEKERSGYKDFHAR 509

Query: 503 FLTE 506
            L E
Sbjct: 510 RLVE 513


>gi|221134901|ref|ZP_03561204.1| probable acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999]
          Length = 586

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/454 (18%), Positives = 164/454 (36%), Gaps = 54/454 (11%)

Query: 74  ARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           A+ A      L+      G R     V     + A  +  I +G +  + +  FE     
Sbjct: 46  AKFAESEIAPLNQIGDEQGCRLHNGAVTTPDGFAAAYQTYIENGWNAMLGNPDFEGQDLP 105

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            +  +    +   A L        + ++   +    +  + + +  KI S E+  T    
Sbjct: 106 YSMAVPVHEMLNSANLSWRLTTMLTESAVLAINKHGSEELKQRYLAKIISGEWTGT---- 161

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIM 245
                    + LTE   GTD++ ++++    +DG Y ++G+K F+++   D       ++
Sbjct: 162 ---------MNLTEPHAGTDLSLLSTKAVPQNDGSYAITGNKIFITAGDHDWSENIIHLV 212

Query: 246 LAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           LA+  +   G   +   L            GSPN +    ++ K+G +++ T  + +   
Sbjct: 213 LARLPDAPKGVKGISLFLVPKINVNDDGTLGSPNAVSVGSIEKKMGLKASPTCVMNYDEA 272

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------- 347
            GFL+G+ +     +  M         +  +     S   A+ YA  R  S         
Sbjct: 273 QGFLIGEEHSGLACMFTMMNDARFQVGLQGLGIGEASYQGALEYAVERLQSRAPQGIQAP 332

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMA 397
                 +I QP ++R +           ALS   A   D  K  + EA          + 
Sbjct: 333 DKKADPIIFQPDVRRMLLTQRSLTEGCRALSMLYAKFMDIEKYATGEAKTNAEVVIAYLT 392

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K +   MA  V    ++  GG GYI E  + ++ R++    +  G+      D++  
Sbjct: 393 PICKAFFTDMATEVSNYGIQIYGGHGYIREWGMEQYVRDTRIAQLYEGTNGIQAADLIGR 452

Query: 458 LEKG-----TNLFEQLFSTLEQDLGSSGKKVITI 486
                     N+   +F+ +  D+  S  +   +
Sbjct: 453 KLTRSNGAMMNITHNVFNEIVNDIADSDYQAHAL 486


>gi|326403749|ref|YP_004283831.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050611|dbj|BAJ80949.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 386

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 135/352 (38%), Gaps = 20/352 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL           +    A +           L    ++  +V   S  + +  T   
Sbjct: 46  ELGLFGLSIPEEHGGIGLSMAQECEVVHRLGQTSLAFRSVIGSNVGIGSQGILMDGTAAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++ P++ S E             + +   LTE   G+D A++T++ ++  +       
Sbjct: 106 KAEYLPRVASGE-------------LIMSFALTEPDAGSDAASLTTRAERDGEDYILNGA 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P +  F ++A+  G  G   +   +      GL   R   K+G R   T ++ 
Sbjct: 153 KRYITNAPRAGGFTLMART-GGPGASGISAFIVPADTPGLKLGRPDRKMGQRGTKTCDVI 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L  A ++    R    EAI YAR R   G
Sbjct: 212 LENARVPAANIIGGVPGQGFRTAMKVLDRGRLHIAAVACGMARRLQDEAIAYARERRQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   +++A  AL   +A ++D+ ++     A   + A   K +C +
Sbjct: 272 RPIGEFQLVQAMLADSEAELSAGWALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           M   V   A++  GG+GY+ E  + R YR+     +  G+     + +   L
Sbjct: 331 MVGRVADRAVQVHGGAGYMAEYKVERFYRDVRLLRLYEGTTQIQQMIIGRAL 382


>gi|163855156|ref|YP_001629454.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258884|emb|CAP41183.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 132/360 (36%), Gaps = 27/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++ +    GL   +    +  +        +   L     +    +++  +  A+ V  
Sbjct: 40  EIVEKMKDMGLFGCLIAPEYGGLGLSTVTYAKIIELISEEWMSLSGILNSHLIMAAAVQR 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P+  + E             +  G+GLTE   GTD+ AI +  ++  D 
Sbjct: 100 NGTEEQKQAFLPRFATGE-------------LRGGIGLTEPDCGTDLQAIRTVARRDGDA 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  +    + F +L + +         +   + +  P G    R   K+G +
Sbjct: 147 YVINGAKMWITNGYHGNCFALLVKTDPQAEPRHKGMSLFIAEKGP-GFTVSRQLEKLGYK 205

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F N        + G        V +   L  ++ A   V   + +L E++ Y
Sbjct: 206 GIDSTELVFENYRVPADRLIGGVEGRGLQMVLNGLELGRINVAARGVGVAQAALRESVKY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  + +   ++  + D+A    A+  L  R A ++D  +    EA  A     
Sbjct: 266 AQQRKTFGKPICEHQAIQTKLGDMATRTEASRLLVQRAAEAYDRGERCDMEAGMA----- 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A     EAM   GG GY +E  + R YR++P   I  G+     + +   L
Sbjct: 321 --KLFATETAVENSLEAMRIHGGYGYSKEYLVERFYRDAPLLVIGEGTNEMQRIIIARQL 378


>gi|254700278|ref|ZP_05162106.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261750771|ref|ZP_05994480.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261740524|gb|EEY28450.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
          Length = 380

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 124/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERLIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKHIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|107104289|ref|ZP_01368207.1| hypothetical protein PaerPA_01005363 [Pseudomonas aeruginosa PACS2]
 gi|254243932|ref|ZP_04937254.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192]
 gi|126197310|gb|EAZ61373.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192]
          Length = 596

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 168/513 (32%), Gaps = 55/513 (10%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR        L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLADAPAGVKGISLFLVPKFVANPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD++     G    E L    E  + S   +    L     
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVRRKLLGDQGGELLALQGELAVASEALQGRAALAPLAE 486

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
              +     R LT +  L + A      G   +
Sbjct: 487 PVLQRLEEWRQLTGQ-VLEACARDPQEIGATSV 518


>gi|255264517|ref|ZP_05343859.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
 gi|255106852|gb|EET49526.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62]
          Length = 567

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/473 (19%), Positives = 175/473 (36%), Gaps = 45/473 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKV------EFHPAWHALLRRSIHDGLHC 117
            +      E  ++ +     L      G+    V         P +          G   
Sbjct: 35  DMADAILTEAGKLCD---DVLAPLNRNGDLHPAVLENGIVRTSPGFSDGYAAIAEGGWIG 91

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              D  F  +            +   A L        +      +    +  + + + PK
Sbjct: 92  ISADPEFGGMALPMTLTTAVNEMMASACLSLQLNPLMTQGQIEALEHHASDAIKELYLPK 151

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+D+ A+ S+ +   DG + +SG K ++S 
Sbjct: 152 LISGEWCGT-------------MNLTEPQAGSDVGALRSKAEPNGDGTFKISGQKIYISW 198

Query: 238 PMSDA-----FIMLAQ----VEG--RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
             +D       ++LA+    V+G   +  F+VP+ + D     G  N L    L++K+G 
Sbjct: 199 ADNDFTENVCHLVLARLPDAVDGVKGISLFMVPKRIPDENGAPGVANSLRVVSLEHKMGL 258

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
             + T  +E+ N  G+L+G+ +     +  M     L   +  V     +   A+ YA  
Sbjct: 259 HGSPTAVMEYDNAVGWLIGEEHAGLAAMFTMMNNARLGVGVQGVGVAEGAYQHAVTYAMD 318

Query: 342 RHVS----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS--EEAAYARI 395
           R        G +I+   ++R +A +  DI AA  ++   A + D  ++    E    A  
Sbjct: 319 RKQGKASGAGTIIEHADVRRMLASMKTDIFAARGIALSCAVAIDMEQATGDVEWRDRAAF 378

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-V 454
           + PI K +  ++   V  + ++  GG G+IEE   A++ R+    +I  G+     +D V
Sbjct: 379 LTPIAKAFGTEVGMDVSHQGIQVHGGMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDLV 438

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
              +  G     +L   +EQ   ++      +     S  +  +    +L  +
Sbjct: 439 ARKMMDGGEAAMRLLDEIEQAAETAKATFPVLAEQVWSAAETLRETTEWLVSQ 491


>gi|225717626|gb|ACO14659.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Caligus clemensi]
          Length = 411

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 141/380 (37%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P     +      GL        +             A  Y +A  E 
Sbjct: 52  PKAKSIDQEHRFPE--ECVIEMGKLGLMGINTPEEYGGSGLG-------AMEYAIAMEEI 102

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +++ V L     ++ D   K  +        +P    +      LTE   G
Sbjct: 103 SRGC-----ASTGVILSAHNSLYLDPINKNGNHTQKEKFVSPFVDGNQIGCFCLTEPGNG 157

Query: 209 TDIAAITSQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D  A ++  +   DG Y        W  ++P + + ++ A  +  +    +   +    
Sbjct: 158 SDAGAASTMAKISKDGSYFILNGTKAWITNAPEAKSMVVFATTDSSLKHKGITAFIVPKD 217

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G+   + ++K+G R ++T  +   +          V        KI +  LD   + V
Sbjct: 218 LPGVGLGKKEDKLGIRGSSTSNVILEDVEVP---KEYVLGKLGMGFKIAMQTLDGGRIGV 274

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +A+     A+ YA +RH  G  +    +++  IAD++  + A+  L +R A + 
Sbjct: 275 AAQAQGIAQNALDTAVDYASKRHSFGTAIAKLQMVQSKIADMSTRVEASRLLLYRAAAAK 334

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D     ++EAA        +K +  + A  V  ++++ +GG G++ +    R+YR++   
Sbjct: 335 DAGMPFTKEAAM-------SKLFASETATWVAHQSIQVLGGMGFVTDMPSERNYRDARIT 387

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + + + + K
Sbjct: 388 EIYEGTSEIQRIVIASNVMK 407


>gi|311103624|ref|YP_003976477.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758313|gb|ADP13762.1| acyl-CoA dehydrogenase, N-terminal domain protein 2 [Achromobacter
           xylosoxidans A8]
          Length = 382

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 128/371 (34%), Gaps = 32/371 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSV 156
           +  P     +R     GL           +      ++R    L   +        +   
Sbjct: 35  QVPPDIVNEMR---ELGLFGLSISPDHGGLGLTMEEEVRVVFELGQTSPAFRSLAGTNIG 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             +  + L  T     ++ PK+ S E             +     LTE   G+D  A+  
Sbjct: 92  IGSQAIVLAGTDEQRANYLPKLASGE-------------LIGSFALTEPDAGSDAMALRL 138

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
              +  D        ++  ++P++  F ++A+         +   L +    GL   +  
Sbjct: 139 SAVRDGDSYVLNGTKRYITNAPIAGLFSVMARTAPERRANSISCFLVEAGTPGLTIGKPD 198

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-- 333
            K+G     T ++ F N        L          +  +  LD   + +S + V +A  
Sbjct: 199 KKMGQAGALTSDVVFDNCRVPASALL--GGEEGNGFRTSMRVLDKGRLHISALCVGIADR 256

Query: 334 ---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
              +A+ YA  R   G  + +  +++  IAD   ++ AA  +    A   D  ++ + +A
Sbjct: 257 LLSDAVKYAIERKQFGQPIAEFQLIQAMIADSQAELYAARCMVLDAARMRDRGENTTMQA 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K +  +M   V   A++  GG+GY+ E ++ R YR+     I  G+    
Sbjct: 317 A-------CCKLYATEMVGRVADRAVQIHGGAGYMSEYAVERFYRDVRLFRIFEGTSQIQ 369

Query: 451 VLDVLNLLEKG 461
            L +     K 
Sbjct: 370 QLVIARETIKA 380


>gi|126740571|ref|ZP_01756258.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
 gi|126718372|gb|EBA15087.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6]
          Length = 566

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 88/481 (18%), Positives = 171/481 (35%), Gaps = 39/481 (8%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLR 108
           +   +  E  G+ V S    E  ++ +     ++  G   P       +   P +    +
Sbjct: 24  AATERYAEASGDLV-SAILTEAGKLCDEVMAPVNRAGDLQPAYLENGVLRTSPGFGEGWK 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G       +    +            +   A L        S      +    + 
Sbjct: 83  AIAEGGWIGMSAPQDHGGMGLPMTLTTAVNEMMSAACLSLQLAPLMSQGQIEALEHHASD 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + + + PK+ S E+  T             + LTE + G+D+ A+ S+     DG + +
Sbjct: 143 ALQELYLPKLISGEWSGT-------------MNLTEPQAGSDVGALASKAVPNGDGTFAV 189

Query: 229 SGHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCY 272
           SG K F+S   +D       ++LA++         +  FLVP+ + D     G  N L  
Sbjct: 190 SGQKIFISWGDNDFAGNVCHLVLARLPDGVPGTKGISLFLVPKYIPDESGDPGEANSLKV 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             L++K+G   + T  ++F    G+L+G  +     +  M     L      V     + 
Sbjct: 250 VSLEHKMGLHGSPTCVMQFDGAKGWLVGPEHGGMAAMFTMMNNARLGVGGQGVGVAEGAY 309

Query: 333 AEAIHYARRRHVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRS 387
            +A+ YA  R         + D   ++R + ++  D  A+ A+    A++ D   A   +
Sbjct: 310 QQALTYATERKQGKTPSGFIADHADVRRMLMEMKADTYASRAILLACAHAIDMHTATGDA 369

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E  A A  + PI K +  +    V    ++  GG G+IEE   A+  R+    +I  G+ 
Sbjct: 370 EWKARAAFLTPIAKAFGTETGNRVADTGVQVHGGMGFIEETGAAQFLRDVRVTAIYEGTN 429

Query: 448 NAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               +D V   +  G  +   +   +E     +      +       C+  +    +L  
Sbjct: 430 GIQAMDLVARKMMDGGEMANSIIDEIEAQAEGARGTHPNMGEAVWQACESLREATEWLVA 489

Query: 507 K 507
           +
Sbjct: 490 Q 490


>gi|259416105|ref|ZP_05740025.1| long-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
 gi|259347544|gb|EEW59321.1| long-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
          Length = 387

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 149/413 (36%), Gaps = 43/413 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + +  E ++L +   S   +E A       P+   +   GE  D+        +    + 
Sbjct: 12  AWMTDEHKMLADMTQSFITREWA-------PKFERWRKQGE-MDR--------STWAEAG 55

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +        H+         A L +      S   A  +    T    
Sbjct: 56  ELGLLCPSIPEEYGGAGGDFGHEAAILIEASRANLASWGHGIHSGIVAHYILSYGTEEQK 115

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E             +   L +TE   G+D+ AI ++  +  + +Y LSG 
Sbjct: 116 QRWLPKMVSGE-------------LIGALAMTEPSTGSDVQAIKTKAIRDGN-VYRLSGQ 161

Query: 232 KWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++      I++A + +  +G   +  + LE    +G    R   K+G  +  T EL
Sbjct: 162 KTFITNGQHANLILVASKTDPSLGSKGISLVGLETDGADGFTRGRNLEKVGLHAADTSEL 221

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        L      G  + M+ L    L  A  ++  M+ ++   I Y + R   
Sbjct: 222 FFDNIAVPPENILGGAEGQGFYQMMQQLPQERLIIACGAIGAMQGAVERTIAYCKEREAF 281

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG L      +  +A+       A A         DE          +   A + KYW  
Sbjct: 282 GGPLTQFQNTRFKLAECLTKSKVARAF-------LDECMVEHLRGNLSVEKAAMAKYWIT 334

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               AV+ E ++  GG G+++E ++A  + ++    I  G+   M   +   L
Sbjct: 335 DTQGAVLDECLQLHGGYGFMQEYAVAEMWTDARVQRIYGGTNEIMKELIARSL 387


>gi|295395252|ref|ZP_06805460.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972014|gb|EFG47881.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 387

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/395 (18%), Positives = 146/395 (36%), Gaps = 29/395 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   +E+A MA     +     P    WD+    P    +++++   G+          
Sbjct: 12  LTDDQREIANMARTFADE--MIAPHALEWDENHHFPV--DVIKQTGELGMASIYVSEESG 67

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +            A       +S     A ++         + W           
Sbjct: 68  GSGLGRMDAALIFEALSTACPAVAAYISIHNMVAWVLDKFADEDQKQRWL---------- 117

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
               P+          LTE   G+D AA+ +  +   D  Y L+G K F+S    SD+++
Sbjct: 118 ---TPLTNFDKLSSYCLTEPGAGSDAAALATSARLDGDH-YVLNGVKQFISGAGSSDSYL 173

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGD 301
           ++A+  G VG   +   + D    GL +   + K+G R+  T ++   N    +   +GD
Sbjct: 174 VMART-GDVGAKGISAFMIDKDTPGLSFGTNEKKMGWRAQPTRQVMLDNVRVPVEDRIGD 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L+    ++ G + +L +A+ Y   R   G  L     ++  +A 
Sbjct: 233 EGTGFKIAMSGLDGGRLNIGACALGGAQSALEKAVTYMSERQAFGAELNQFQALRFEVAG 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D+ AA +  +R A+++D     +       +++ + K     ++  V   A++  GG
Sbjct: 293 MQADLEAARSFLWRAASAYDANDPNT------TLLSAMAKLKSTDISFDVANRALQIFGG 346

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GY+ E  + +  R+   + IL G+   M + +  
Sbjct: 347 YGYLAEYGVEKLVRDLRVHQILEGTNEIMRVIISR 381


>gi|146231716|gb|ABQ12933.1| acyl-Coenzyme A dehydrogenase family, member 9 [Bos taurus]
          Length = 620

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 85/483 (17%), Positives = 170/483 (35%), Gaps = 54/483 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R A +  +    A  L
Sbjct: 84  RKIDQEGKIPD--ETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLAEVIGLDASIAVTL 141

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +      + P++ S E+                  LTE   G+D 
Sbjct: 142 AAHQSIGLKGIILAGSKEQKARYLPRLASGEH-------------VAAFCLTEPASGSDA 188

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++    +D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 189 ASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVKDK-ITAFIVE 247

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    NV        K+ +  L+S   
Sbjct: 248 RDFGGVTNGKAEDKMGIRGSNTCEVHFENTRVPV---ENVLGEVGGGFKVAVNILNSGRF 304

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  M        +     YA  R      L +  +++   A +A       ++++  A 
Sbjct: 305 SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTAA 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D             I A + K +  + A   ++EA++ +GG GY+ +    R  R+S 
Sbjct: 365 MLDAPGFPD-----CSIEAAMVKVFSSEGAWTCVSEALQILGGLGYMRDYPYERLLRDSR 419

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L++ ++ +  + V   LRDS+    +
Sbjct: 420 ILLIFEGTNEILRMYIALTGLQHAGRILTARVKELKRGNVTTIMETVGQRLRDSLGRTVD 479

Query: 497 DKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHST 541
                +      +LA  A                 L R G   + +  +  R  +   + 
Sbjct: 480 LGLTGKLGVVHPSLADGAHKLEENVYYFGRSVETLLLRFGKTIVEEQLVLKRVANVLINL 539

Query: 542 HCM 544
           + M
Sbjct: 540 YGM 542


>gi|195335832|ref|XP_002034567.1| GM21947 [Drosophila sechellia]
 gi|194126537|gb|EDW48580.1| GM21947 [Drosophila sechellia]
          Length = 627

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 162/413 (39%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 268

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 269 PEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 325

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 326 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 386 LEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDTGLERVLRDLRIFRIFEGTN 438

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 439 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 498

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 499 SELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAMV 551


>gi|46198546|ref|YP_004213.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
 gi|46196168|gb|AAS80586.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
          Length = 378

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 141/358 (39%), Gaps = 37/358 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTT 167
           + +    +   F P     A     A L L+ ++     +   ++    + L       T
Sbjct: 39  EEMAELGFLGVFVPEALGGAGLDFFAYLALLEEMGGWASLRSVLSVQQSLVLTPLLAYGT 98

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + P++   E             V     LTE   G+D A++ ++ ++  D  Y 
Sbjct: 99  EAQKARYVPRLARGE-------------VLGAFALTEPEAGSDAASLKTRARREGD-FYV 144

Query: 228 LSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L G K F+S   +++ F++ A+ +   G   +   L +   +G+    LK K+G R+  T
Sbjct: 145 LEGQKTFISHANVAEVFLVFAKTDPEKGAKGITCFLVERG-DGVKTSPLKGKLGLRAADT 203

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYAR 340
             +              V     E  +I +       +  A  +V  M+ +L  ++ YA 
Sbjct: 204 GMVFLDGVRVPKD---RVLGKEGEGFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYAG 260

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  +A + LD+ AA  L++R A    + +  + EA+ A       
Sbjct: 261 ERKQFGKPIAQFQLVQEHLAAMKLDLEAARLLTYRAAWKKVKGEPYTLEASLA------- 313

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V   A++  GG G+ EE  +AR YR++   ++  G+     L +   L
Sbjct: 314 KLFASEAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEVQKLIIGAHL 371


>gi|40889734|pdb|1UDY|A Chain A, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889735|pdb|1UDY|B Chain B, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889736|pdb|1UDY|C Chain C, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 gi|40889737|pdb|1UDY|D Chain D, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
          Length = 396

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 136/400 (34%), Gaps = 47/400 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            TA++ AR      P    Y   GE       +P    LL+R+   GL  +    SF  +
Sbjct: 25  ATARKFAR--EEIIPVAAEYDRTGE-------YPV--PLLKRAWELGLMNTHIPESFGGL 73

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                             +    L++  +                   P I    Y    
Sbjct: 74  GLG---------------IIDSCLITEELAYGCTGVQTAIEANTLGQVPLIIGGNYQQQK 118

Query: 188 K--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           K    M +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +
Sbjct: 119 KYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFL 178

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+ +              + +    G+   R +  +G R + T  + F +         
Sbjct: 179 LARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVP---KE 235

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV TG     KI +          A  +V   + +L EA  YA  R   G +L +   + 
Sbjct: 236 NVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGIS 295

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  A     R A   D  +  +         A I K +   +A  +  +A+
Sbjct: 296 FLLADMAMKVELARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAV 348

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 349 QVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAR 388


>gi|76496475|ref|NP_001029031.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           isoform 2 precursor [Homo sapiens]
 gi|18044943|gb|AAH20218.1| Acyl-Coenzyme A dehydrogenase, very long chain [Homo sapiens]
          Length = 633

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 167 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 213

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 214 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 273

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 274 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 330

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 331 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 385

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 386 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 444

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 445 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 503

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 504 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 557


>gi|301764555|ref|XP_002917688.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 621

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 86/482 (17%), Positives = 169/482 (35%), Gaps = 52/482 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R D+    P  +  L +    GL        +  +        R   +  +    A  L
Sbjct: 85  QRIDREGRIP--NETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLGEIVGLDASIAVTL 142

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L         + PK+ S E+                  LTE   G+D+
Sbjct: 143 AAHQAIGLKGIILAGNKEQKARYLPKLASGEH-------------IAAFCLTEPSSGSDV 189

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDG 265
           A+I S+     D   Y L+G K W  +  M++ F + A+ E           +   + + 
Sbjct: 190 ASIKSRATLSEDKKHYILNGSKVWITNGGMANIFTVFAKTEVVDSDSSVKDKITAFIVER 249

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              G+   + ++K+G R + T E+ F NT   +    NV        K+ +  L+S   S
Sbjct: 250 DFGGVTNGKPEDKLGIRGSNTCEVRFENTRVPI---ENVLGEVGGGFKVAMSTLNSGRFS 306

Query: 325 VSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +           +     YA  R      L +  +++   A +A       ++++  A  
Sbjct: 307 MGSTVAGMLKKLIEMTAAYACTRKQFNKSLGEFGLIQEKFALMAQKTYVMESMAYLTAGM 366

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+            I A + K +  + A   ++EA++ +GG GY+ +    R  R+S  
Sbjct: 367 LDQPGFPD-----CSIEAAMVKVFSSEGAWQCVSEALQVLGGLGYMRDYPYERLLRDSRI 421

Query: 440 NSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKED 497
             I  G+   + + + L  L+    +     + L+  ++ +  + V   LRDS+    + 
Sbjct: 422 LLIFEGTNEILRMYIALTGLQHAGRILTARVNELKSGNVSTVIETVGQRLRDSLGRTVDL 481

Query: 498 KGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTH 542
               +      ++A SA                 L R G   + +  +  R  +   + +
Sbjct: 482 GLTGKLGVVHPSVADSANKLEENVYYFGRTVETLLLRFGKTIVEEQMVLKRVANVLINLY 541

Query: 543 CM 544
            M
Sbjct: 542 GM 543



 Score = 37.6 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 13/103 (12%)

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYW 403
            G  ++++ ++ + +A++ +++   TA+  R + S     ++   E   A I      Y 
Sbjct: 519 FGKTIVEEQMVLKRVANVLINLYGMTAVLSRASRSIRMGVRNHDHEVLLANIFCAEAYYQ 578

Query: 404 C-------CKMAPAVIAEAM-----ECIGGSGYIEERSIARHY 434
                    K +P  + E +     + +    YI    + R +
Sbjct: 579 NLFTLSQLDKYSPENLDEQIKKVSQQVLEKQAYICAHPLERTF 621


>gi|290961610|ref|YP_003492792.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651136|emb|CBG74257.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 383

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 133/381 (34%), Gaps = 33/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P + A+    E+ D+        AL+++    G      D  +                 
Sbjct: 26  PHVIAWDR-AEQVDR--------ALVKKLGEVGFLGLTLDEEYGGSGGDHLAYCLVTEEL 76

Query: 142 LMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                    ++S S+   A  VA        + W P + + EY                 
Sbjct: 77  GRGDSSVRGIVSVSLGLVAKTVAAWGDEEHKRRWLPGLTAGEY-------------VGCF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D   +T++  +            +  +   +D  ++ A+     G   +  
Sbjct: 124 GLTEPGTGSDAGNLTTRAVRDGGDFVISGTKTFITNGTWADVVLLFARSTDAPGHQGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--Y 317
            L      GL  + +  K+G R   T EL            L     G    M  L    
Sbjct: 184 FLVPTDTPGLRRRAIHGKLGLRGQTTAELVLEEVRVPASALLGPEGKGFTVAMSALAKGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A   V   + +L  A+ YA  R   G  +    +++  I DIA+D+ AA  L++R+A
Sbjct: 244 MSVAAGCVGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELITDIAVDVDAARLLTWRVA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D  +  + EA+ A       K +  + A      A++  GG GYI+E    +  R++
Sbjct: 304 DLVDRGQPFATEASKA-------KLFASEAAVRAANNALQVFGGYGYIDEYPAGKLLRDA 356

Query: 438 PANSILLGSGNAMVLDVLNLL 458
              ++  G+     L +   L
Sbjct: 357 RVMTLYEGTSQIQKLLIGRAL 377


>gi|213965498|ref|ZP_03393693.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium
           amycolatum SK46]
 gi|213951882|gb|EEB63269.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium
           amycolatum SK46]
          Length = 390

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 81/383 (21%), Positives = 139/383 (36%), Gaps = 24/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ERW K         + +++   GL       ++           +     L  
Sbjct: 27  KEITPNVERWHKEGQPD--REIFKKAGELGLIGMSTPEAYGGGGEMDFRYNQVLNEEL-- 82

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   S +   + +V+      +   +  K  + E      A M        L +TE
Sbjct: 83  --------SNADCGSIVVSFGVLNDLVAPYLAKFGNEEQKQKYLASMNAGDTIGCLAMTE 134

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A + +  +K  D  Y L+G K F+S+ M +D  ++ A  +   G   V   + 
Sbjct: 135 PGAGSDLAGMRTFAKKDGDH-YVLNGTKIFISNGMMADFALVAAITDPSKGRAGVSMFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G        K+G ++  T EL F N       LLG+   + G +        L  
Sbjct: 194 DADLEGFTKAGPLQKVGLKAQDTAELNFDNVRVPAENLLGEEGAAFGYLRTNLAHERLTL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV+  R +   A  YA+ R   G  +I   V    +ADIA  + A  A   +   + 
Sbjct: 254 ACGSVATSRRAWTLAYKYAQEREAFGRPIIQHQVHGHYLADIATRVTALQAFVDQAVMAH 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +            A + KYW  +    ++   ++  GG G++ E  I+ HY +S   
Sbjct: 314 NAGQ-------LDETGASMAKYWTTEEQQDIVTRCLQMFGGYGFMLEYPISTHYLDSKVQ 366

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
           +I  G+   M   +   + KG  
Sbjct: 367 TIYGGTNEIMKEIIFRRIAKGGA 389


>gi|72162178|ref|YP_289835.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915910|gb|AAZ55812.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 383

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 133/378 (35%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+ E  P    L+ R    G         +  V                 
Sbjct: 22  REITPHVVEWDRAESVP--RDLVPRLGELGFLGMTIPEEYGGVGGDHVSYALVMEELGRG 79

Query: 145 QLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L+S S+   A  +A   T    + W P + S E             +    GLT
Sbjct: 80  DSSVRGLVSVSLGLVAKSIATYGTEEQRQRWLPGLCSGE-------------LLGCFGLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D A+++ +  +  D         +  +   +D  I+ A+  G  G   +   L 
Sbjct: 127 EPDTGSDAASLSLKAVRDGDDYVLTGSKMFITNGTWADVAIIFART-GGPGPKGITAFLV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
                GL    +  K+G R   T +L           +LG+ N              +  
Sbjct: 186 PTDTPGLTRTTIHGKLGLRGQPTAQLFLDEVRVGPDAILGEENQGFRIAMAALDKGRVSV 245

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +L  A+ +A+ R   G  +    +++  +AD+A++  AA  L +R A+  
Sbjct: 246 AAGAVGAARGALESALAHAKERVQFGRPIAGFQLVQEMLADMAVETDAARLLVWRAADLI 305

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S  A+ A       K +  + A      AM+  GG GYI+E    ++ R++   
Sbjct: 306 DRGEPFSTAASMA-------KLYATETAVRAANNAMQVFGGYGYIDEYPPGKYLRDARVT 358

Query: 441 SILLGSGNAMVLDVLNLL 458
           ++  G+     L +   L
Sbjct: 359 TLYEGTSQIQKLIIGRAL 376


>gi|313902989|ref|ZP_07836384.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466713|gb|EFR62232.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 539

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 121/512 (23%), Positives = 209/512 (40%), Gaps = 49/512 (9%)

Query: 35  NAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
           N +  D  L  ++A++    +    EL   G        +    + +   P L  +   G
Sbjct: 11  NHWERDPDLRHVLAHYWPGFTAHEDELRRFGALAGKEVYEVAYHVDHDAPPVLVMHDLDG 70

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+V   PA  ALLR                 P     +     A  YL+A      +
Sbjct: 71  HRVDRVRLSPAQQALLRELA----------PMNRPPYEGGSWHHHYALGYLVADPGIYCI 120

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +  +A ++          +W  K+   E+                  +TE +GG+D+
Sbjct: 121 LTITNQTAYVIHKYAPE--FAEWKAKLLRGEFWG-------------ATWMTEVQGGSDL 165

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLLED 264
            A T Q  +  D  + L G K+F S   ++D  ++ A+ EG       +  FLVPR+   
Sbjct: 166 GANTLQATRDGDA-WRLDGEKYFCSGAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNRA 224

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N    +RLK+K   R+  + E++F  +  FL+G+         ++  +  L +AI  
Sbjct: 225 GELN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEKGIYYTLEVLTVSRLANAIAG 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS----F 380
           +   R +  E +   RRR   G  L+D P+++R + D+A+ IA    L F  A+     +
Sbjct: 284 MGIARKAHLEVLERVRRRRSFGRQLVDHPLIRRDLTDMAVRIAGGLVLGFHAADLFEKAW 343

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE    +    YAR ++ + K      A  V   AME  GG G++EE ++AR +RE+   
Sbjct: 344 DELPPYTSRYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEYAVARWHREALIT 403

Query: 441 SILLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQDLGSSGKKVITIL-----RDSIS 492
            I  G  N   LD+L  + K         +  + LE+      +    ++     R + S
Sbjct: 404 PIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIAMLEKAGTPEARTAREVIEGTLVRLAGS 463

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMND 524
             +E +  A+  T ++A A+    LY+     
Sbjct: 464 EPEEAQWYAKDATARLADAAQVGLLYKLAETA 495


>gi|118464119|ref|YP_881045.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165406|gb|ABK66303.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 380

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 139/390 (35%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQA 132
           A       P +  +   G+         AW A    +   GL    +D  +  + V+   
Sbjct: 19  AFFERECVPNIEKWERDGK-----VSREAWLA----AGEHGLIGWEFDEKYGGLGVKDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                +    M       L   +      +  +TT    + W PK  S EY         
Sbjct: 70  FNQIISEEMFMTGSVGIGLGVQNDILMPYLNNLTTEEQKERWLPKFTSGEY--------- 120

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG 251
                  + ++E   G+D+A I +  +   D     +G K F+S+ +    ++ A + + 
Sbjct: 121 ----IGSIAMSEPAAGSDLAGIKTTARDEGDHWVV-NGQKTFISNGLLSKLVLTAVKTDP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
                 +  L+ +   +G    R  +KIG  S  T EL F +       L+G+LN     
Sbjct: 176 SARHKGISLLMIEDGMDGFTRGRKLDKIGQYSADTAELFFEDVRVPKENLVGELNRGFYH 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        +  A  ++   R +L     YA  R   G  +    V +  +A++   + A
Sbjct: 236 LVSNLPSERVGVACYALPAARRALELTKAYALERTAFGQPIGKFQVNRHFLAEMQTKLDA 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A   +   S ++      +AA  +        W  ++   +I   ++  GG GYI E 
Sbjct: 296 AQAYLDQCVLSVNDGTLSDADAAGLKW-------WTSEIQWEIIDRCLQLHGGYGYINEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AR +R++    +  G+   M   V   +
Sbjct: 349 EVARLWRDARVQRLYAGTTEIMKDLVGRAM 378


>gi|326564442|gb|EGE14669.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis
           103P14B1]
          Length = 608

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 83/500 (16%), Positives = 178/500 (35%), Gaps = 61/500 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSI 111
           L    E         L   A++    +      G+          V     +  +  +  
Sbjct: 27  LSAYAELDTDTINSYLEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEVYAQYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPR 169
             G      +  F  +    +  + +A   +M        M P ++  ++  +       
Sbjct: 87  ELGFPAINAEPEFGGLGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGIEV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+ +  +  T             + LTE   G+D+  I ++     DG Y ++
Sbjct: 145 QKATYLEKMNTGAWSGT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAIT 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+S+   D       I+LA++         +  F+VP+ + +     G  N +   
Sbjct: 192 GQKIFISAGEHDLTENIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G +++AT  + F +  G+L+G  N     +     +  L +AI  ++   ++  
Sbjct: 252 SIEHKMGIKASATCVMNFDHAKGYLIGPKNRGLNAMFTFMNVARLGTAIQGLAASELAFQ 311

Query: 334 EAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRL---AN 378
            ++ YA+ R              S   +I  P ++  +           AL + L   A+
Sbjct: 312 GSLTYAKERTAMRALSGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFAD 371

Query: 379 SFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + ++ SE         ++ PI K +  +         ++  GG GYI E  + ++ R
Sbjct: 372 TVAKGENPSEVKFADEILSLLTPIAKAFLTETGLESANMGVQVYGGHGYISEWGMEQNLR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++  + +  G+     LD+L     G    +       + Q    +       +   +S 
Sbjct: 432 DTRISCLYEGTTEIQALDLLGRKVLGSQGRMLANFTQIIHQFCQENADN--DEVGQMVSK 489

Query: 494 CKEDKGLARFLTEKIALASS 513
             +     R LT +IA+ S+
Sbjct: 490 LAKLNQQWRDLTSRIAMQST 509


>gi|221045280|dbj|BAH14317.1| unnamed protein product [Homo sapiens]
          Length = 385

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 41  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 101 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 148 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 208 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 265 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 318 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 377


>gi|71907187|ref|YP_284774.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
 gi|71846808|gb|AAZ46304.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Dechloromonas aromatica RCB]
          Length = 597

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 106/556 (19%), Positives = 195/556 (35%), Gaps = 77/556 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDGLHC 117
            + S    E A+ A      L      G++         V     W A  +     G + 
Sbjct: 36  DLASAVLDEAAKFA---GEVLAPLNATGDKQGCKLTAAGVTTPDGWKAAYKAFCDAGWNG 92

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 F          I    +   A L        +  +   +    +  +   +  K
Sbjct: 93  IASPAEFGGQGLPDTLAIAVKEMVCSANLAFSIGPLLTTGATEALLTCASDELKSIYLEK 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + + E+  T             + LTE + G+D+A I S+ +  +DG Y + G K F+S 
Sbjct: 153 MVTGEWTGT-------------MNLTEPQAGSDLALIRSRAEPQADGSYRVFGQKIFISY 199

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281
              D       ++LA++         +  FLVP+ + +     G+ N      +++K+G 
Sbjct: 200 GDHDMTDNIVHLVLARLPDAPAGVKGISMFLVPKFMVNADGSLGARNDAHCVSIEHKLGI 259

Query: 282 RSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T  + + +     G+LLG+ N     +  M     L   +  V+    +   A+ Y
Sbjct: 260 HASPTCVMAYGDNGGAVGYLLGEANRGLEYMFIMMNEARLGVGLQGVALGERAYQHALAY 319

Query: 339 ARRRHVSGGILI--------DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSE 388
           AR R      L           P ++R +  +   + A+ A ++  A+  D   A +  E
Sbjct: 320 ARERKQGRDALTGEALVTLDKHPDIRRMLMLMKTRVEASRAATYYTASLLDRVHAINDPE 379

Query: 389 EAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           E       A  + PI K    +M   V +  ++  GG G+IEE   A+H+R+S   +I  
Sbjct: 380 EKKRNLYLAEFLIPIVKGGGTEMGIEVTSLGIQIHGGMGFIEETGAAQHWRDSRITTIYE 439

Query: 445 GSGNAMV--LDVLNLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDSISLC----- 494
           G+       L    L+       + +F  +    + LG+SGK  +  +   +        
Sbjct: 440 GTTGIQANDLLFRKLMRDQGATAKVVFGEVYATAKTLGASGKPELIAIGQRLGTALKAWT 499

Query: 495 KEDKGLARFLTEKIALASSAAALYRA-----------GMNDIADV-FLENRFLDNCHSTH 542
              + LA      ++   +AA  Y             G   +A   +LE    D      
Sbjct: 500 AATEWLAANAKTGLSGVLTAAVPYLHLAVTVCGGWFMGKAALAAAGYLEQGEGDQAFYRA 559

Query: 543 CMLHGRFNAAHIIDSL 558
            +   RF A  ++   
Sbjct: 560 KLASARFYADQLLPQA 575


>gi|302816175|ref|XP_002989767.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii]
 gi|300142544|gb|EFJ09244.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii]
          Length = 393

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 128/380 (33%), Gaps = 43/380 (11%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLM 143
               P     D     P    L +      LH       +  +      H +    +   
Sbjct: 51  EHIAPHAATIDATNSFPKDRNLWKLMGDFNLHGITAPEKYGGLGLGYLYHCLAMEEISRA 110

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +    T    + + P++ S E+                L ++
Sbjct: 111 SGSVGLSYGAHSNLCINQLVRNGTEAQKEKYLPQLISGEH-------------VGALVMS 157

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + ++   G        W  + P+++  I+ A+ +   G   +   + 
Sbjct: 158 EPNSGSDVVSMKCKAERRDKGYVLNGNKMWCTNGPVANTLIVYAKTDNSAGAHGITAFII 217

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDS 320
           +    G    +  +K+G R + T EL F + F      L      V  M     L  L  
Sbjct: 218 EKGMEGFTTAQKLDKLGMRGSDTCELVFQDCFVPPENILGQEGKGVYVMMSGLDLERLVL 277

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  +   + Y R+R   G  + +  +++  +AD+   + A+ AL   +A S 
Sbjct: 278 ASGPLGLMQACMDVVLPYVRQREQFGKPIGEFQLIQGKLADMYTKMQASRALVHSVARSC 337

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D                             +  +A++C+GG+GY+ E    R  R++   
Sbjct: 338 DAGH--------------------------IDRKAIQCLGGNGYVNEYPTGRLLRDAKLY 371

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 372 EIGAGTSEIRRVLIGRQLYK 391


>gi|90076170|dbj|BAE87765.1| unnamed protein product [Macaca fascicularis]
          Length = 655

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 154/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TLAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A+ YA  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 353 RGIITKAVDYATNRIQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 410

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 411 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|60653459|gb|AAX29424.1| acyl-coenzyme A dehydrogenase C-4 to C-12 straight chain [synthetic
           construct]
          Length = 422

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 413


>gi|254511130|ref|ZP_05123197.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221534841|gb|EEE37829.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 567

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 93/498 (18%), Positives = 181/498 (36%), Gaps = 42/498 (8%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANY-NTPQLHAYGPGGERWDK--VEFHPAWHALLRR 109
              +      E V+S    E  +M      P          R +   +   P +    + 
Sbjct: 24  AATQRFSEASEDVVSAILTEAGKMCEEVMAPLQRPGDLEPARLENGVLRTSPGYAEGWKA 83

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
               G      D  +  +            +   A L        +      +    +  
Sbjct: 84  IAEGGWIAMSGDPEYGGMGLPMTMTTAVNEMMSAACLSLQLAPLMTQGQIEALEHHASDE 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +   + PK+ + E+  T             + LTE + G+D+ A+T++ +  SDG Y ++
Sbjct: 144 LKALYLPKMMAGEWSGT-------------MNLTEPQAGSDVGALTAKAEDNSDGTYSVT 190

Query: 230 GHKWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K ++S   +D       ++LA++         +  FLVP+ + D     G  N L   
Sbjct: 191 GQKIYISWGDNDFCENVCHLVLARLPDGVPGTKGISLFLVPKHIPDENGNPGVANDLKVV 250

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            L++K+G   + T  +++    G+L+G  +     +  M     L      V     +  
Sbjct: 251 SLEHKMGLHGSPTCVMQYDGARGWLVGKEHGGMAAMFTMMNNARLGVGGEGVGVAEGAYQ 310

Query: 334 EAIHYARRRHVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSE 388
            A+ YA  R         +ID   ++R +  +  D+ AA A+    A + D A++   ++
Sbjct: 311 HALAYALERKQGKTPSGTIIDHADVRRMLMSMRADVFAARAIMLANAAAIDMAQATGDAD 370

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            AA A ++ PI K +  +    V    ++  GG G+IEE   A++YR+    +I  G+  
Sbjct: 371 WAARAALLTPICKAFGTETGMRVAETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNG 430

Query: 449 AMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
              +D V   +  G     +L   +E     +   +  +        +  +    +L  +
Sbjct: 431 IQAMDLVARKMMDGGEAASRLLDEIEDQAEKARATMPELAGPVWEATESLRETTEWLVAQ 490

Query: 508 IAL----ASSAAALYRAG 521
             +    A +AA L    
Sbjct: 491 SDMNNRFAGAAAYLKAFA 508


>gi|160961497|ref|NP_001104286.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pan troglodytes]
 gi|158514237|sp|A5A6I0|ACADM_PANTR RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|146741394|dbj|BAF62353.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, nuclear
           gene encoding mitochondrial protein [Pan troglodytes
           verus]
          Length = 421

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---RENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 413


>gi|301111296|ref|XP_002904727.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
 gi|262095057|gb|EEY53109.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
          Length = 411

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 121/302 (40%), Gaps = 32/302 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++                 +     L+E   G+D  A+ ++ +   DG
Sbjct: 128 HGTDEQKEKYLPRL--------------SADMIGSFCLSEAGSGSDAFALKTRAEASPDG 173

Query: 225 IY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y        W  ++  S  +++ A V+   G   +   + D    GL   + + K+G R
Sbjct: 174 SYYSITGQKMWISNAEYSGVYLVFANVDPSKGYKGITCFIVDRDMEGLEIGKPEEKLGIR 233

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH---- 337
           +++T  +  ++         N+     +  KI I  L+   + ++   + LA+ ++    
Sbjct: 234 ASSTCPVTLTDVKVP---KENILGELGKGYKIAISTLNEGRIGIASQMLGLAQGVYDQTL 290

Query: 338 -YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  + +   M+   A+ ALDI  A  L +  A   D  +   ++AA A++ 
Sbjct: 291 PYLFERQQFGSPIGEFQAMQHQYAEAALDIETARLLVYNAARLKDAGQPFVKQAAMAKLH 350

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A    ++ +E +GG G+ +     + YR++   +I  G+ N  +  +  
Sbjct: 351 A-------SRVAEKTASKCIELLGGIGFTKYLLAEKFYRDAKIGAIYEGTSNMQLTTIAK 403

Query: 457 LL 458
           L+
Sbjct: 404 LV 405


>gi|260428261|ref|ZP_05782240.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260422753|gb|EEX16004.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 387

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 139/401 (34%), Gaps = 31/401 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D     P  + L       GL        F  
Sbjct: 9   DLGEDVNALREMVHRWAQERVRPMAAEVDSSNAFP--NELWTEMGELGLLGITVPEEFGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    +   +   +    + S    + + L  T      + P + S ++  
Sbjct: 67  AGMGYLAHVVAVEEIARASASVSLSYGAHSNLCVNQIKLNGTQEQKAKYLPGLVSGQH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +K +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMKLRAEKKNDRFVLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + S  G       +K+G R + T EL F +       +LG+ 
Sbjct: 174 YAKTDPDAGSRGITAFLIEKSMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFQNILGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A +    M   L E + Y   R   G  +    +M+  IAD+
Sbjct: 234 GKGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYLTERKQFGQAIGSFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + +A A  + +A + D      ++AA           +  + A     +A++ +GG+
Sbjct: 294 YTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEQAMVQAHQAVQAMGGA 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G++ +  +AR +R++    I  G+     + +   L    +
Sbjct: 347 GFLADAPVARLFRDAKLMEIGAGTSEIRRMLIGRELMAAMS 387


>gi|52421177|dbj|BAD51425.1| butyryl-CoA dehydrogenase [Butyrivibrio fibrisolvens]
          Length = 387

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 144/388 (37%), Gaps = 46/388 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P     + +    G       + +                Y+M   E 
Sbjct: 26  PLAIETDETEVFP--RETVTKMGKSGFLGIPVPKEYGGQGCDP-------LTYVMCVEEL 76

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS----VAIGLGLT 203
             +  + SV  ++  +L   P +   +    +  E   T +  +Q  S    V   L L 
Sbjct: 77  AKVCGTTSVIVSAHTSLCVDPIL--TYGT--YGTEDRSTFRTLLQVRSLVLSVLQSLALV 132

Query: 204 EKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGCF 256
           +      +  + ++     DG  + L+G K F+++   +D +I++A  +           
Sbjct: 133 QT-----LQGVQTKAVLSEDGKTWTLNGSKCFITNGKEADVYIIIAYTDIVEDKKGRKQK 187

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
                + +    G  +   ++K+G R +AT EL F +    ++   N      +   I +
Sbjct: 188 KFTAFIVEKDTPGFTFGTKEHKMGIRGSATYELIFQDC---VIPAENQLGARGKGFPIAM 244

Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + LD   + ++   + LAE      I Y + R   G  +      +  +A++A ++ AA 
Sbjct: 245 HTLDGGRIGIAAQALGLAEGALERTIAYVKERKQFGRSIAQFQNTQFQLANLATEVEAAQ 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L ++ A +       S EAA A       K +  + A  V  + ++ +GG GYI E  +
Sbjct: 305 LLVYKAAEAKRTQDRYSVEAAKA-------KLFAAETAMDVTTKCVQLLGGYGYIREYEV 357

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R  R++    I  G+     + +   L
Sbjct: 358 ERMMRDAKITEIYEGTSEVQRMVISGSL 385


>gi|70730428|ref|YP_260169.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68344727|gb|AAY92333.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 383

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 131/361 (36%), Gaps = 30/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVAL 164
           L+R+    GL   +    +            A           G LMS   +     +  
Sbjct: 42  LVRKMGELGLLGMVVPEEWGGSYLDYVAYALAVEEIAAGDGATGALMSIHNSVGCGPILN 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P++ + E                   LTE + G++   + ++ + + DG
Sbjct: 102 YGSQEQKQQWLPRLAAGE-------------AIGCFCLTEPQAGSEAHNLRTRAE-LRDG 147

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K F+S+   +   I+ A  +  +G   +   L      G    R ++K+G R+
Sbjct: 148 QWVINGAKQFVSNGKRAQLAIVFAVTDPELGKKGLSAFLVPTDTPGFIVDRTEHKMGIRA 207

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHY 338
           + T  +  +         L      +     L  L+   + ++   + +       A+ Y
Sbjct: 208 SDTCAVTLNQCTIPEANLLGERGKGL--AIALSNLEGGRIGIAAQALGIARAAFEAALAY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R      +I+   +   +AD+   + AA  L    A      +    E       A 
Sbjct: 266 ARERVQFDKPIIEHQSIANLLADMHTRLNAARLLILHAARLRSAGQPCLSE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +MA  V + AM+  GG GY+E+  + R+YR++    I  GS     L +   L
Sbjct: 319 QAKLFASEMAEKVCSSAMQIHGGYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIAREL 378

Query: 459 E 459
           +
Sbjct: 379 K 379


>gi|4557231|ref|NP_000007.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           a precursor [Homo sapiens]
 gi|113017|sp|P11310|ACADM_HUMAN RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|71042612|pdb|2A1T|A Chain A, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042613|pdb|2A1T|B Chain B, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042614|pdb|2A1T|C Chain C, Structure Of The Human Mcad:etf E165betaa Complex
 gi|71042615|pdb|2A1T|D Chain D, Structure Of The Human Mcad:etf E165betaa Complex
 gi|177964|gb|AAA51566.1| medium-chain acyl-CoA dehydrogenase (EC 1.3.99.3) [Homo sapiens]
 gi|187433|gb|AAA59567.1| medium-chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|13529233|gb|AAH05377.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|56205491|emb|CAI22390.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|119626806|gb|EAX06401.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_c [Homo sapiens]
 gi|123998069|gb|ABM86636.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
           [synthetic construct]
 gi|189069176|dbj|BAG35514.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 413


>gi|330815914|ref|YP_004359619.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3]
 gi|327368307|gb|AEA59663.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3]
          Length = 596

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 85/438 (19%), Positives = 172/438 (39%), Gaps = 56/438 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              R+ +  G         ++     +   I    + ++        + P +T  ++ AL
Sbjct: 79  EAFRQFVAGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDGAIEAL 136

Query: 165 MT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           +T  T      + PK+ S E+  T             + LTE + G+D+A + S+ +   
Sbjct: 137 LTAGTDEQKTRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQG 183

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED-----GS 266
           DG Y + G K F++    D       ++LA+          +  F+VP+ L       G 
Sbjct: 184 DGSYKVFGTKIFITWGEHDMADNIVHLVLARTPSAPEGVKGISLFIVPKFLVKEDGSLGE 243

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M         + 
Sbjct: 244 RNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQ 303

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSF 374
            +     +  +A  +A+ R  S            +I  P ++R +  +      A AL++
Sbjct: 304 GIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRALTEGARALAY 363

Query: 375 RLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   D+A +  + A  AR  A      P+ K W  +M   V +  ++  GG G+IEE 
Sbjct: 364 VAAAHSDQAHAHPDAAERARHQAIYEYLVPVVKGWSTEMVNEVTSLGVQVHGGMGFIEET 423

Query: 429 SIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKV 483
             A++YR++   +I  G+       L     +  G  + + L + ++   + LG+     
Sbjct: 424 GAAQYYRDARILAIYEGTTAIQANDLVGRKTVRDGGAVAKSLLAGIDETVEALGAQDTPA 483

Query: 484 ITILRDSISLCKEDKGLA 501
              +R  ++   +    A
Sbjct: 484 FAAMRRHLADGAKSLAAA 501


>gi|289627527|ref|ZP_06460481.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649923|ref|ZP_06481266.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868352|gb|EGH03061.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 383

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLTE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|332878036|ref|ZP_08445766.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332683998|gb|EGJ56865.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 576

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 148/389 (38%), Gaps = 35/389 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V++       L   +  G++     R +  +          A +   A    G++ S  
Sbjct: 84  RVDYARGTVENLDAMVKAGMNGMTMPRKYNGLNFPITPYTMCAEVVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P++ + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGDEDQHSRFIPRVCAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L G   +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKMGIHGSPTCELVYKNAKAELCGSRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            EA+ YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D          E
Sbjct: 309 NEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGRALLYQTSRYVDIYKALDDIARE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAYDGIQVHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           ++   SI  G+     +  +  +  G  +
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGAYI 457


>gi|241338844|ref|XP_002408432.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215497346|gb|EEC06840.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 416

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 138/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E+ P     +R++   G         +      +              +  
Sbjct: 63  PNMCEWDEKEYFPV--EAMRKAAELGFGGVYISEDYGGAGLGRLDASVIFEALSRGCVST 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    +  ++           W P++ + E                   LTE   G
Sbjct: 121 TAYISIHNMACYLIDAFGNHEQKLKWLPQLCTME-------------KFASYCLTEPGSG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++++  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 168 SDAASLSTTAKRDGDD-YILNGSKAFISGSGTSDIYVIMVRT-GGPGPKGISAVVVEKGT 225

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            GL + + + K+G  +  T  +   +    +   L     G    MK L    ++ A  S
Sbjct: 226 RGLSFGKKEKKLGWNTQPTRMVILEDCRVPVANRLGEEGQGFQFAMKGLDGGRVNIASCS 285

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  AI + + R   G  L      +  +A +A  +  +  +  + A S D   
Sbjct: 286 MGAAAASIDIAIEHMKVRKQFGKPLAAFQHHQFLLAKMATALQTSRLIVRKAAESIDLDS 345

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +  + K    +    V  +A++ +GG G+I+E  I ++ R+  A+ I+ 
Sbjct: 346 PYKTA------LCAMAKLHGTEAGFKVTNQALQMMGGYGFIKEYPIQQYLRDLRAHLIIE 399

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M L +   + +
Sbjct: 400 GTNEMMQLVISRDILR 415


>gi|300788948|ref|YP_003769239.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299798462|gb|ADJ48837.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLE 147
           P    W +    PA   + R     GL   + D ++          + A      A Q  
Sbjct: 26  PYAADWSERAHFPA--KVFRTLGELGLMGMLVDEAYGGANAGFVSYVAAMEALGAADQSV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S  ++  +A   T    + W               P+         GLTE   
Sbjct: 84  ASAWNAHSTIASLPLATFGTEEQKQRWL-------------VPLATGQNIGAFGLTEPTA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLE 263
           G+D A+I ++ ++  DG + L+G K F+S+  ++      +LA   +G    F     + 
Sbjct: 131 GSDAASIRTRARRDGDG-WVLNGTKMFISNAGTEMSLGVTVLAVTGDGDKRRFG-TFFIP 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           DG   G    +   K+G  +  T EL F++       L+G+         ++     +  
Sbjct: 189 DG-TPGYEKGQPLRKLGWHAMDTRELVFTDVRLPGDHLIGEEGNGLRQFLEVLDAGRISV 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A + +S  + SL  A+ +A  R   G  L     +   +AD+A +I AA AL +R A   
Sbjct: 248 AALGLSLAQASLDLALRHATDRQQFGRPLSGFQAVAHKLADMATEIEAARALVYRAAWLG 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +  S+EAA A       K +  ++A    + +++  GG GY+ E +I+R Y ++   
Sbjct: 308 DQGRPFSQEAAMA-------KLYASEVANRAASASVQIHGGYGYMRESAISRFYADAKIL 360

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   L K
Sbjct: 361 EIGEGTSEVQRNVIAKRLLK 380


>gi|254420905|ref|ZP_05034629.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187082|gb|EDX82058.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 594

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 94/483 (19%), Positives = 180/483 (37%), Gaps = 57/483 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWDK--VEFHP-AWHALLRRS 110
               + +   ++    +E  + A+    P  +     G  W +  V   P  W    +  
Sbjct: 26  QPGFQDVSSDLVGQILEEGGKFADEVIAPINNPGDKEGCHWSEGGVVTGPKGWKEAYKAM 85

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTP 168
              G      D ++          + +A   + A   A   M P +TS++   +    + 
Sbjct: 86  SEAGWMALAADPAYGGQGMPSI--VASAFGQMTAGASAAFSMYPGLTSSAYAGIHASASD 143

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + PK+ S E+  T             + LTE + GTD+  + ++     DG Y +
Sbjct: 144 EIKAKYLPKMVSGEWSGT-------------MNLTEPQCGTDLGMVRTKAVPNGDGSYSI 190

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K ++S+   D        +LA++EG       +  F+VP+ L +     G  N L  
Sbjct: 191 TGQKIWISAGEHDFSDNIIHTVLARIEGAVPGIKGLSLFVVPKYLVNEDGSLGERNTLEC 250

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             L++K+G   NAT  +++    G+LLG+       +  +     L + +  ++    + 
Sbjct: 251 AGLEHKMGIHGNATCVMQYDGAKGWLLGEEGRGMNNMFVVMNEARLGTGLQGLAIGTAAY 310

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A  +A+ R                  +I  P ++R + +    +    A     A   
Sbjct: 311 QAAAEFAKDRLQGRSLTGPKNPEGPADPIIVHPDVRRMLLEARAFVEGGQAFILWTALHA 370

Query: 381 DEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           D  KS  E  A     Y  ++ P+ K +       V + AM+  GGSGY E    +++ R
Sbjct: 371 DLEKSEDEAVATKAKDYMGLLTPVLKAYLTDKGFHVASLAMQVHGGSGYTEHFPASQYLR 430

Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK-KVITILRDSIS 492
           ++    I  G+     LD++   L   G       F  ++  +  +G  + I    D ++
Sbjct: 431 DARITMIYEGTNGIQALDLVGRKLPAHGGRAIMTWFGEIDAFVAENGANEAIKPFVDGLA 490

Query: 493 LCK 495
             K
Sbjct: 491 DAK 493


>gi|170742081|ref|YP_001770736.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168196355|gb|ACA18302.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 376

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 145/378 (38%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P     +      G    +   ++            A           
Sbjct: 23  PFAAEWDRDSRFP--REAVAALGELGFLGMLVPEAYGGSAVDHVSYALAIEEIAAGDGAV 80

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS   + A +  L   T    + +               P+ + +      LTE   
Sbjct: 81  STIMSVHNSVACVPILRFGTEAQKERFL-------------VPLARGAQLGAFCLTEPGA 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A+T++ +++ +  Y LSG K F++S   +D  I+ A  +   G   +   +   +
Sbjct: 128 GSDAGAVTARARRVGN-RYVLSGTKQFITSGRSADLAIVFAVTDPEAGKRGISAFIVPTA 186

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    R+++K+G R++ T ++ F +    L  DL +     E ++I L  L+   + +
Sbjct: 187 TPGYRVARIEHKLGQRASDTAQIVFEDM--ELTPDL-LLGQEGEGLRIALSNLEGGRIGI 243

Query: 326 SGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V +A A   A       R   G  L     +   +AD+A  I AA  L    A   
Sbjct: 244 AAQAVGMARAAFEAALAYAGERETFGQKLTAHQAVAFRLADMATRIEAARLLVHNAARLR 303

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   +EAA A       K +  +MA AV ++A++  GG GY+ +  + R YR+    
Sbjct: 304 DAGQPCLKEAAMA-------KLFASEMAEAVCSDAIQIHGGYGYLADYPVERIYRDVRVC 356

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+ +   + +   L
Sbjct: 357 QIYEGTSDVQRIVISRAL 374


>gi|163742750|ref|ZP_02150135.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161384005|gb|EDQ08389.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
          Length = 401

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 128/377 (33%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+     P   +L  +    G                +           MA
Sbjct: 42  EHIAPFARQWEAEGTIP--KSLWPQIGELGFGALYVSEETGGAGLSRLDATLVFEALSMA 99

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +  +     P I S                 +   LTE
Sbjct: 100 CPSVAAFLSIHNMCAKMLDSFASDEMKARIMPDILSM-------------KTVLSYCLTE 146

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++  K ++G Y L+G K F+S        +     G  G   V  +  +
Sbjct: 147 PGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTVYVE 205

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL +  L+ K+G +S  T +++F +       L+G+                L+ A
Sbjct: 206 DGTAGLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGEEGKGFTYAMKGLDGGRLNIA 265

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D
Sbjct: 266 SCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQAAWKLD 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +          A     + K +  +    V+ + ++  GG GY+ +  I +  R+   + 
Sbjct: 326 QGAPD------ASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQ 379

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M +     L
Sbjct: 380 ILEGTNEIMRVITARHL 396


>gi|195173806|ref|XP_002027676.1| GL14800 [Drosophila persimilis]
 gi|194114621|gb|EDW36664.1| GL14800 [Drosophila persimilis]
          Length = 580

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 165/414 (39%), Gaps = 54/414 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK  S E+            V     LTE   G+D  +I S+  K 
Sbjct: 116 ILLYGTPEQKEKYLPK-VSTEH------------VYAAFALTEPSSGSDAGSIRSRAVKS 162

Query: 222 SDG-IYCLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQ 273
            D   Y L+G K ++S+  ++D   + AQ E      G      V   + + S  G+   
Sbjct: 163 DDKKYYVLNGSKIWISNGGIADIMTVFAQTELVDLKTGEKKDK-VTAFIVERSFGGVTNG 221

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG----- 327
             + K+G +++ T E+ F +    +    N+     +  K+ +  L++    +       
Sbjct: 222 PPEKKMGIKASNTAEVYFEDVKIPI---ENILGKEGDGFKVAMNILNNGRFGMGATLSGT 278

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSR 386
           M+  +  A  +A  R   G  L +   ++  +A +++   A  +++F ++ + D   +  
Sbjct: 279 MKKCIEIATSHANNRVQFGQKLKNYGSIQEKLAQMSILQYATESMAFTISQNMDNGSQDY 338

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA       I+K +  + A  V  EA++ +GG G++ E  + R  R+     I  G+
Sbjct: 339 HLEAA-------ISKIYASESAWYVCDEAIQILGGMGFMVEAGLERVLRDLRIFRIFEGT 391

Query: 447 GNAMVLDV-LNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISL--------- 493
            + + L + L  ++   +  ++L S  +    +LG   K+        + L         
Sbjct: 392 NDILRLFIALTGIQYAGSHLKELQSAFKNPSANLGLIFKEASKRAASKVGLGGCDLSSHV 451

Query: 494 CKEDKGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             E +  A+   E I L   +    L R   N + + F+ N   +     + M+
Sbjct: 452 APELQPYAKKTEECIDLFGQSVEVLLLRYNKNIVNEQFILNLLANAAIDIYSMV 505


>gi|186472767|ref|YP_001860109.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195099|gb|ACC73063.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 600

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 93/516 (18%), Positives = 185/516 (35%), Gaps = 65/516 (12%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           L        + V   LE  G+      A  L  + +    Q         R  +V   P 
Sbjct: 26  LPGYADATAATVQSVLEEAGKLCGEIWA-PLNAVGDRQPAQW--------RDGRVSASPG 76

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    R  +  G         +      +        +   A L      S +  +   +
Sbjct: 77  FEQAFRHFVDGGWQGVAHPSEYGGQGLPKLVGAACIEMQCAANLSLATCPSLTDGAIEAL 136

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  +    + + P++ S E+  T             + LTE + G+D+  + ++ ++  
Sbjct: 137 LMAGSDAQKRRYLPRLVSGEWSGT-------------MNLTEPQAGSDLGLLRTRAERQH 183

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y + G K F+S    +       ++LA+          +  FLVP+ L D     G 
Sbjct: 184 DGSYRVFGTKIFISWGEHEMSRNIVHLVLARTPDAPAGVKGISLFLVPKYLVDEDGHAGE 243

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            N +    +++K+G   + T  L++ +     G L+G+ N     +  M +         
Sbjct: 244 RNDVNCVSIEHKMGLTGSPTAVLQYGDRGGAIGELIGEENRGLEYMFVMMVAARFAVGTQ 303

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSF 374
            ++    +  +A  YA+ R  S            +I+ P ++R +  +     A+ AL++
Sbjct: 304 GIAIAERAYQKARSYAKERVQSRPVDGSAQQSVTIINHPDVRRMLGTMRALTEASRALAY 363

Query: 375 RLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   D A+   +  A A        M PI K W  +M+  V +  ++  GG G+IEE 
Sbjct: 364 VAAAHSDHAQRHPDAQARAMHHGLYEFMVPIVKGWSTEMSVDVASLGVQIHGGMGFIEET 423

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
             A+ YR++    I  G+      D++    +  G  + + L   + + + +        
Sbjct: 424 GAAQFYRDARILPIYEGTTAIQSNDLIGRKTVRDGGAVAKSLIGEIGEVVQALEAS---- 479

Query: 487 LRDSISLCKEDKGLARFL-TEKIALASSAAALYRAG 521
              + +     K + R L     + A++ A +    
Sbjct: 480 --PAFADNAAFKAMHRHLAAGNQSFANAVAFMLEHA 513


>gi|71734853|ref|YP_273957.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555406|gb|AAZ34617.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 383

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WIINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|3273228|dbj|BAA29057.1| very-long-chain acyl-CoA dehydrogenase [Homo sapiens]
          Length = 655

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFCTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 353 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 407

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 408 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|307545729|ref|YP_003898208.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
 gi|307217753|emb|CBV43023.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581]
          Length = 595

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 97/497 (19%), Positives = 173/497 (34%), Gaps = 55/497 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGG--ERWDK-VEFHPAWHALLRRS 110
               E +G  ++    +E AR+       L+A     G   R D  V     +    R  
Sbjct: 26  LPGFEEVGADLVEAVLEEAARLTGDVWAPLNASGDRQGCVRRDDGGVNVPDGFADAYRAY 85

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G +    ++        +     A +  L     A  L       A    +     V
Sbjct: 86  AEGGWNGIGVEQVHGGQGLPEV-VASAVQEMLHGANMALGLCPMLTAGAIEALIQHGDEV 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLS 229
                             AP+ +      + LTE + G+D++ + ++ +    DG+Y L+
Sbjct: 145 L------------CERYLAPLVEGRWTGTMNLTEPQAGSDLSLVRTRAEPSGEDGVYRLT 192

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA++         +  FLVP+ L D     G  N +   
Sbjct: 193 GQKIFITWGEHDCAENIVHLVLARLPDAPEGNKGISLFLVPKFLVDDDGAPGERNDVVCT 252

Query: 274 RLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            L++K+G   + T  L F       G+L+G+       +  M         I  +     
Sbjct: 253 ALEHKMGIHGSPTCVLSFGEREGAIGYLVGEPGRGLNHMFTMMNAARHKVGIQGIGVAER 312

Query: 331 SLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  +A+ YAR R           + +   +KR +  +     A  AL+   A   D+A+ 
Sbjct: 313 ACQQALAYARERRQGRRNGAECAIAEHLDVKRMLLSMRARTDALRALALTCAAQMDKARH 372

Query: 386 RSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             EE       A   ++ P+ K +    A  + +  ++  GG GYIEE   A+  R++  
Sbjct: 373 AEEEETRQRAQARVDVLIPVVKAFSTDQAVEIASLGIQVHGGMGYIEETGAAQLLRDARI 432

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
             I  G+     LD+    L   G      L   +E    +   +      D ++L +  
Sbjct: 433 APIYEGTNGIQALDLAGRKLGRDGGAALASLVDDVEATAAALAAR-----EDLLALGESL 487

Query: 498 KGLARFLTEKIALASSA 514
            G A  L   +A+    
Sbjct: 488 AGGAADLRAAMAVVLEG 504


>gi|329937929|ref|ZP_08287411.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302886|gb|EGG46775.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 386

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 148/403 (36%), Gaps = 35/403 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   +EL R          A+     +  D  E H   + ++R     GL    +   +
Sbjct: 5   LSPELEELRRTVEEF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEY 59

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +     A  I    L  +    A  L +     A  + L  T    ++W P++ + E 
Sbjct: 60  GGMGGDYFALGIALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKREWLPRLCAGE- 118

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDA 242
                       +    GLTE  GG+D  A  +  +       + ++G K F+++  +D 
Sbjct: 119 ------------ILGAFGLTEPEGGSDAGATRTTARLDEKTNEWVINGTKCFITNSGTDI 166

Query: 243 ---FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                + A  + +  G  ++  ++      G       +K+G  ++ T EL F++     
Sbjct: 167 TGLVTVTAVTDRKPDGRPVISSIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADVRVPA 226

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G  + ++IL    +  A ++    +  + E++ YA+ R   G  + +   +
Sbjct: 227 ANLLGERGRGYAQFLRILDEGRIAIAALATGLAQGCVDESVKYAKERKAFGRHIGEYQAI 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+      +       A+         +EAA A       K +   +A     EA
Sbjct: 287 QFKIADMETKAHTSRLAWRDAASRLVSGDPFKKEAALA-------KLYSSTIAVDNAREA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG G++ E  +AR +R++    I  G+     + +   L
Sbjct: 340 TQIHGGYGFMNEYPVARMWRDAKILEIGEGTSEVQRMLIAREL 382


>gi|126444479|ref|YP_001061917.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126223970|gb|ABN87475.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 377

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAVTDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    R + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGRPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|254440209|ref|ZP_05053703.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198255655|gb|EDY79969.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 378

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 77/402 (19%), Positives = 146/402 (36%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS     +  MA+    +     P    WD     P    L  +    G        
Sbjct: 2   DFALSQEQAAIYDMAHAFGAE--HIAPHARDWDAAGIIP--RDLWPKLAELGFGGLYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +       +            +       +S     A M+    +  +   + P + S E
Sbjct: 58  ASGGTALTRLDGTLVFEALSASCASVAAFLSIHNMCAKMIDDFGSEAMKARFLPTVLSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                          +   LTE   G+D A++ ++   ++D  Y L+G+K F+S    SD
Sbjct: 118 -------------TILSYCLTEPASGSDAASLKTKA-DVTDTGYALTGNKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           A+I++A   G  G   +   + +    G+ +  L++K+G RS  T +++          L
Sbjct: 164 AYIVMAST-GVSGPKGISAFVVESGAEGVSFGGLEDKMGWRSQPTRQVQLEKCNISGDNL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG ++              L+ A  S+   + +L + IHY   R   G  L     ++  
Sbjct: 223 LGVIDQGFKYAMKGLDGGRLNIAACSIGAAQSALDKTIHYMAERQAFGQSLDQFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +D+ +A     + A   D           A +   + K  C +    +  + ++ 
Sbjct: 283 LADMEIDMQSARTFLRQAAWKLDCQDPD------ATVFCAMAKKLCTETGSRIADQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG GY+ +  I +  R+   + IL G+   M +     L K
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVITARHLIK 378


>gi|148656424|ref|YP_001276629.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148568534|gb|ABQ90679.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 414

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 143/397 (36%), Gaps = 34/397 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +L  T ++ A       P +  +   G   D  E  P    +L+R    GL        
Sbjct: 16  QMLRRTVRDFAE--KEVAPHIREWDRSGAVMDGPETRPHIRQVLKRMGELGLLGICLPTR 73

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    A  +    L  +       +   +  ++  +    T    + +        
Sbjct: 74  LGGAGMDYLALAVVCEELERVDSFLRVVMSVHTGLNSLTLFQWGTEEQQQKYLI------ 127

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD 241
                  P  K        LTE   GTD  A+ +  ++  D  Y L+G K ++S + ++D
Sbjct: 128 -------PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGD-YYILNGEKTWISLADIAD 179

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +   G   +   + + +  G     +  K+G R+  T  +   +    +   
Sbjct: 180 NFLVFAKTDPSKGNRGISCFIVERTMPGFSSHPIHGKLGVRAGNTGSVILEDVRVPVANR 239

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
           +       E  KI +  LD+   +V+     L +A     I YA+ RH  G  + +  ++
Sbjct: 240 VG---EEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASIRYAKERHTFGVPIAEHQLV 296

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           KR I+ +   +  +  L +R     ++ +  + E   A+  A ++ +           +A
Sbjct: 297 KRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSF-------EAADDA 349

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           ++  G  GY +E  I R+ R +    I  G+     L
Sbjct: 350 IQIHGAYGYSDEYPIERYLRNARGAIIYEGTRELQEL 386


>gi|225686848|ref|YP_002734820.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256110975|ref|ZP_05452043.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|225642953|gb|ACO02866.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|326411265|gb|ADZ68329.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554554|gb|ADZ89193.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 380

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 125/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +      ++R    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVRVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLAERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|152985952|ref|YP_001351247.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961110|gb|ABR83135.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 596

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 92/501 (18%), Positives = 166/501 (33%), Gaps = 60/501 (11%)

Query: 54  VHKELELLG----EYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHP-AWHAL 106
           V    ELLG      ++    +E AR  +     L+      G +  D V   P  +   
Sbjct: 20  VGAHCELLGNGIDRELIDGVLEEGARYTSQVVAPLNRNSDEEGAKLKDGVVSTPTGFREA 79

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R+   +G         +      Q        + + A L        +  +   +    
Sbjct: 80  YRQYSENGWASMTGPTEYGGQGFPQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHG 139

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              + +D+  K+ S E+  T             + LTE + GTD+A + ++ +  +DG Y
Sbjct: 140 DEALRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEPRADGSY 186

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGL 270
            +SG K F+S    D       ++LA+  +   G   +   L            G  N L
Sbjct: 187 AISGSKIFISGGEQDLTENIVHLVLARLPDAPAGVKGISLFLVPKFIARPDGSLGERNSL 246

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +++K+G +  +T  + F    G+LLG  N     +  M         +  +     
Sbjct: 247 GCGAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTMMNDARFQVGLQGLGIAER 306

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +   A+ YAR R  S               +I  P ++R +      +     L+   A 
Sbjct: 307 AFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAACCAR 366

Query: 379 SFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D      +             + PI K +   +   V +  ++  GG G+I E  + +
Sbjct: 367 QLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWGMEQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             R+S    I  G+     LD+++    G    E L       L          L+   +
Sbjct: 427 LMRDSRITQIYEGTNGIQALDLVHRKLLGDQGGELL------ALQGELAAASEALQGRAA 480

Query: 493 LCKEDKGLARFLTEKIALASS 513
           L    + + + L E   L   
Sbjct: 481 LAPLAEPVLQRLEEWRQLTGQ 501


>gi|257483788|ref|ZP_05637829.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|320325178|gb|EFW81246.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|330889973|gb|EGH22634.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. mori str. 301020]
 gi|331012700|gb|EGH92756.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 383

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|323453824|gb|EGB09695.1| hypothetical protein AURANDRAFT_24725 [Aureococcus anophagefferens]
          Length = 421

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 83/435 (19%), Positives = 140/435 (32%), Gaps = 40/435 (9%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR------MANYNTPQLHAYGP 89
           A+S++           +     L  +G   +     +  R       AN   P    +  
Sbjct: 14  AFSAEPAPAYASERINAATAPTLMEIGCRDIFDEDHDAFRQMCRDFFANEVKPFHKEWEK 73

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GE        P    L  ++   GL   +   ++  +                +     
Sbjct: 74  AGEV-------P--RELWTKAGDLGLLACMVPEAYGGLGTDCRFPAVVWEEQSYSGCTGP 124

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    T    +   PK+ S E+                LG+TE   G+
Sbjct: 125 GFAMHSDIVAPYITNYGTEEQKQRILPKLVSGEW-------------IGALGMTEPSAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D A I +   K  D  Y ++G K F+++  M+D  I+ A+ +   G   V   L +    
Sbjct: 172 DFANIKTTAVKDGDD-YVINGSKVFITNGWMADVTIVCAKTDASKGAHGVSLFLIEDGMK 230

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G        K+G ++  T EL F +       LLG+       V        L  A M V
Sbjct: 231 GFTKGNKLEKMGMKAQDTCELFFEDLRVPKSALLGEEGKGFYAVMSELPQERLLIADMGV 290

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           S           Y   R    G L +  V+   +A++  DI    A          + K 
Sbjct: 291 SAAEAVFEWTRDYTMDRSAFKGKLSNLQVVGHKLAEMKTDICVGRAFVDNCIALHSQRKL 350

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S +A+ A       KYWC  +   +    ++  GG GY+ E  + + + +     I  G
Sbjct: 351 DSVQASMA-------KYWCTDLQCKIADAGVQLHGGWGYMWEYDVCKAFVDGRVQPIYGG 403

Query: 446 SGNAMVLDVLNLLEK 460
           +   M   +   +  
Sbjct: 404 ANEIMKELISRSITN 418


>gi|226361541|ref|YP_002779319.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240026|dbj|BAH50374.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 395

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 133/383 (34%), Gaps = 25/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+ E  P    + R     GL        F          +         
Sbjct: 27  ERIRPVATELDETERFPE--EIYREMGKIGLFGITVPEKFGGFGGTALDYLFVMESLSYG 84

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                          S++    TP   + +               PM          LTE
Sbjct: 85  YASVADQCGLVEILGSLLGNYGTPEQQEQYL-------------RPMLSAEKRCAYALTE 131

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLE 263
              G+D+ +IT++  +  DG        +  ++P++D  ++LA  +  +G    +   L 
Sbjct: 132 PGSGSDLGSITTRAVRSGDGWVLSGEKIYIHNAPVADFAVVLAVTDPELGKRGGISVFLV 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           D    G+     ++K+G R++    L F +       LLG+   + G +  +     L  
Sbjct: 192 DVDQPGVSRAYHEHKMGQRASQVGGLVFDSVRLPSDALLGEEGKAFGYMMKVLAKGRLGI 251

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +S+   R +L  A   +  R   G  +     +  ++A +A ++ A TALS   A + 
Sbjct: 252 SGLSLGISRAALDAATRQSLDRSQFGKPISANQGISFSLATVATELRAGTALSVEAARAL 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D        AA A  +  + K +  +        A++  GG+G+I    + R YR++   
Sbjct: 312 DTG------AADAETLCSMAKLYASEGCVRHADAAVQVFGGNGFIRGYEVERLYRDARIT 365

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     L +   + KG  
Sbjct: 366 KIYEGTSEMQRLIISRAVLKGAA 388


>gi|159043846|ref|YP_001532640.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911606|gb|ABV93039.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 387

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 133/363 (36%), Gaps = 24/363 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           AL       GL     D ++        AH +    +   +        + S    + + 
Sbjct: 45  ALWPEMGELGLLGITVDEAYGGAGMGYLAHTVAVEEISRASASIGLSYGAHSNLCVNQIK 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S              +    L ++E   G+D+  +  + +K +D
Sbjct: 105 LNGTDAQKEKYLPKLVSG-------------AHVGALAMSEAGAGSDVVGMKLRAEKRND 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P +D  ++ A+ +   G   +   L +    G       +K+G R 
Sbjct: 152 HYRLNGTKYWITNGPDADTLVVYAKTDPEAGSKGITAFLIEKEMAGFSTSPHFDKLGMRG 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
           + T EL F +        L      V  +   +  +  ++S   +  M   L E + Y  
Sbjct: 212 SNTAELIFEDVEVPFENVLGEEGRGVAVLMSGLDYERVVLSGVNIGIMAGCLDEVMPYMT 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +  +M+  IAD+   + +A A ++ +A + D  +   ++AA         
Sbjct: 272 ERRQFGEPIGNFQLMQGKIADMYTAMNSARAYAYEVAKACDRGEVTRQDAA-------AC 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  +    V  +A++ +GG+G++ +  +AR +R++    I  G+     + V   L  
Sbjct: 325 VLYASEEGMKVAHQAVQAMGGAGFLNDSPVARMFRDAKLMEIGAGTSEIRRMLVGRELMA 384

Query: 461 GTN 463
              
Sbjct: 385 AMA 387


>gi|296331728|ref|ZP_06874195.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675882|ref|YP_003867554.1| FAD dependent acyl-CoA dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151053|gb|EFG91935.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414126|gb|ADM39245.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 594

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 170/482 (35%), Gaps = 62/482 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D +E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    +    K + P + S E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGSEEQKKTYLPGLASGE-------------KIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + +    G
Sbjct: 160 LGAKTTAVLNEAGTHYMLTGEKQWITNSAFADVFVVYAKVDGEK----FSAFIVEKDFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G +    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHLIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  IA +A  + A  +  +R    F++    
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPIASFSLTQEKIATMASRLYAMESSVYRTVGLFEDNMSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 FTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK  +L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVPSTFLKKALKGELPLFEKAQSLQEELMMLMPEEPGSR--- 452

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                     + +++K + +   +KIAL ++  A  + G     +  +     D   + +
Sbjct: 453 ----------VLEQEKYIVKQ-AKKIALFAAGLAAQKYGKAIDREQEILVNVADIVSNVY 501

Query: 543 CM 544
            M
Sbjct: 502 AM 503


>gi|330809778|ref|YP_004354240.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377886|gb|AEA69236.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 383

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 137/381 (35%), Gaps = 38/381 (9%)

Query: 89  PGGERWDKVEFHPAWHA--LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W    L+ +    GL   +    +            A         
Sbjct: 27  PHAQAWEKA----GWIDDGLVAKMGELGLLGMVVPEEWGGTYVDYVAYALAVEEISAGDG 82

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +      L   T    + W   + S                     LTE 
Sbjct: 83  ATGALMSIHNSVGCGPVLNFGTDEQKQTWLADLASG-------------QAIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPELGKKGISAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIM 323
               G    R ++K+G R++ T  +  SN     + + N+     + + I L  L+   +
Sbjct: 189 TDTPGFIVDRTEHKMGIRASDTCAVTLSNCT---IPEANLLGARGKGLAIALSNLEGGRI 245

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   + +       A+ YAR R      +I+   +   +AD+   I A   L    A 
Sbjct: 246 GIAAQALGIARAAFEAALAYARDRVQFDKPIIEHQSIANLLADMHTRINATRLLILHAAR 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                K    E       A   K +  +MA  V + A++  GG GY+E+  + R+YR++ 
Sbjct: 306 LRSAGKPCLSE-------ASQAKLFASEMAEKVCSSAIQIHGGYGYLEDYPVERYYRDAR 358

Query: 439 ANSILLGSGNAMVLDVLNLLE 459
              I  GS     + +   L+
Sbjct: 359 ITQIYEGSSEIQRMVIARELK 379


>gi|297564550|ref|YP_003683522.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296848999|gb|ADH62014.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 394

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 147/378 (38%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    P   A++++    G+  +     +           R            
Sbjct: 34  PGAAERDRTGEFPL--AIVKKLGELGVMGANVPEEYGGAGLSTRVFARMLEEIGGVDGSL 91

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  + S +      + +       +++ PK+ + E                  GLTE   
Sbjct: 92  GLTVASHNSLCTGHILIAGNEAQKREFLPKLATAEM-------------LGAWGLTEPGS 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G+D AA+ ++ Q+  +G       ++     ++  +++ A+ +           +   + 
Sbjct: 139 GSDAAAMRTRAQETPEGFVINGSKQFITQGSVAGVYVINARTDPAPSEDKKHLGLSAFVF 198

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
            G   GL   R + K+G  S+ T +L F +        L V   G  + +++L    +  
Sbjct: 199 YGPVEGLRIGRKEEKLGLHSSDTAQLLFEDLHLEKDALLGVRGKGFYDVLRVLDGGRIGI 258

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +SV   R +L  A  YA  R   G  + +   +   +A++A ++ AA  L  R A   
Sbjct: 259 AALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEMATNLEAARLLYLRAAELK 318

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S EAA A++       +  ++A     EA++ +GG GYI+E  + R++R++   
Sbjct: 319 DAGRPFSGEAAQAKM-------FASEVAVRACDEAIQILGGYGYIKEYPVERYWRDARLM 371

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   + + +   L
Sbjct: 372 RIGEGTTEVLKVIIARNL 389


>gi|91078370|ref|XP_974092.1| PREDICTED: similar to GA11516-PA [Tribolium castaneum]
 gi|270003978|gb|EFA00426.1| hypothetical protein TcasGA2_TC003280 [Tribolium castaneum]
          Length = 414

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 129/400 (32%), Gaps = 43/400 (10%)

Query: 68  CTAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              Q +AR  A     PQ   +   GE       +P    +L+++   GL  S       
Sbjct: 37  REMQAMARKFAREEIAPQAAHFDRTGE-------YPI--EILKKAWAVGLMNSHIPEHCG 87

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            + +                   G ++  S      V L  T    K +  ++       
Sbjct: 88  GLNQGVFDACLMGEELSWGCSGIGTVIGSSHLGQVPVILNGTKEQQKKYLGRLI------ 141

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+  + ++ +K  D         W  +  +++ + +
Sbjct: 142 -------EEPLVAAYAVTEPGCGSDVNGVKTRAEKKGDEYVINGQKMWITNGGVANWYFV 194

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+                + D    G+   R +  +G R++ T  + F           
Sbjct: 195 LARTNPDPKAPASKAFTGFIVDRDTPGVTPGRKEMNMGQRASDTRGVTFEEVRVP---KE 251

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV  G     KI +          A  +    +  L EA  Y+  R   G  +     + 
Sbjct: 252 NVLLGEGAGFKIAMGAFDTTRPPVACGATGVAQRCLDEATKYSLERKTFGVPIAYHQAVA 311

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  A     R A   D     S         A I K +   +A    ++A+
Sbjct: 312 FMLADMAIGVETARLAWMRAAWEADHGIRNS-------YSASIAKAYAGDVANKCASDAV 364

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 365 QIFGGAGFNSEYPVEKLMRDAKIYQIYEGTTQIQKLVISR 404


>gi|329894061|ref|ZP_08270046.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328923233|gb|EGG30553.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 384

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 133/379 (35%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W+K E  P    L R+    GL        +       +  +  A +Y ++Q   
Sbjct: 29  PFYDQWEKDEKVP--RELWRKLGQAGLLAVDIPEEYGGAG--GSFDMSMAIVYDVSQAGY 84

Query: 149 GHLMSP----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             L S     S   A  +  M T    + + P   S E                 + +TE
Sbjct: 85  AALSSNMTVHSDIVAHYILNMGTEAQKRRYLPDFVSGEC-------------VGAVAMTE 131

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRV-GCFLVPRLL 262
              G+D+  I +  +K  D  + ++G K F+++      ++ A + +    G   +   L
Sbjct: 132 PGAGSDLQGIRTTAKKDGDH-WVINGSKTFITNGQHCDVVVTAVRTDPDAPGSRGLSLFL 190

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLD 319
            D +  G    R   K+G  +  T EL F +        L     G +  MK L    L 
Sbjct: 191 VDTNLPGFSRGRNLEKMGQHAADTSELFFEDVRVHESAILGELNKGFIGLMKELPRERLA 250

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + +V      L     Y   R   G  L      +  IA +  +     AL     + 
Sbjct: 251 LGVGAVGATEGVLDMTRTYVNERKAFGAPLSKLQNTRFEIAKMYSEFRLNRALMNECIDL 310

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           F+  +  +         A + KY   +   +++   ++  GG GY++E  I+R Y ++  
Sbjct: 311 FNRGELDAA-------TASMIKYTTTEAQCSIVDGCLQFFGGYGYMKEYPISRAYVDARI 363

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M   V   +
Sbjct: 364 QRIYGGTSEIMRELVARAV 382


>gi|217423869|ref|ZP_03455369.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|217392932|gb|EEC32954.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
          Length = 378

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 137/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++  V     + +        A    
Sbjct: 28  PHHERWEEQGYVD--RDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW   +   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYS 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|213514668|ref|NP_001133108.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial [Salmo
           salar]
 gi|197631959|gb|ACH70703.1| acyl-Coenzyme A dehydrogenase C-4 to C-12 straight chain [Salmo
           salar]
 gi|223648080|gb|ACN10798.1| Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Salmo salar]
          Length = 422

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 134/399 (33%), Gaps = 43/399 (10%)

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QELAR  +     P   AY   G      E+      +++R+   GL  S        
Sbjct: 48  EFQELARKFSREEIVPVAAAYDRSG------EYP---FPIIKRAWELGLMNSHIPEDCGG 98

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                        +  +      V +       K +  ++        
Sbjct: 99  MGLGIFDSCLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDSQKKKYLGRMT------- 151

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +    G+TE   G+D+A + ++ +K  D         W  +   ++ + +L
Sbjct: 152 ------EEPLMCAYGVTEPGAGSDVAGLKTRAEKKGDEYVVNGQKMWITNGGKANWYFLL 205

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +     +   N
Sbjct: 206 ARTDADPKCPTSKAFTGFIVDADSPGILVGRKELNMGQRCSDTRGITFEDVR---IPKEN 262

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G ++ +   +  
Sbjct: 263 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALDEATGYALERKTFGKLIAEHQAVSF 322

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A  V ++A++
Sbjct: 323 LLAEMAMKVELARMGWQRSAWEVDNGRRNT-------YYASIAKAFAGDIANQVASDAVQ 375

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 376 VFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 414


>gi|156743108|ref|YP_001433237.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234436|gb|ABU59219.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 445

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 142/397 (35%), Gaps = 34/397 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +L  T +E A       P +  +   G   +  E  P    +L+R    GL        
Sbjct: 47  QILRRTVREFAE--KEVAPFIREWDRSGAAMEGPETRPHIRPILKRMGELGLLGICLPAR 104

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    A  +    L  +       +   +  ++  +    T    + +        
Sbjct: 105 LGGAGMDYLALAVVCEELERVDSFLRVVMSVHTGLNSLTLFQWGTEEQQRKYLI------ 158

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSD 241
                  P  K        LTE   GTD  A+ +  ++  D  Y L+G K ++S + ++D
Sbjct: 159 -------PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGD-SYILNGEKTWISLADIAD 210

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +   G   +   + + +  G     +  K+G R+  T  +   +    +   
Sbjct: 211 NFLVFAKTDPSKGNRGISCFIVERTMPGFSSLPIHGKLGVRAGNTGSVILEDVRVPV--- 267

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355
            N      E  KI +  LD+   +V+     L +A     I YA+ R   G  + +  ++
Sbjct: 268 ANRLGEEGEGFKIAMTALDNGRYTVAAGATGLIQASLEASIRYAQERQTFGVPIAEHQLV 327

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           KR I+ +   +  +  L +R     ++ +  + E   A+  A ++ +           +A
Sbjct: 328 KRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSF-------EAADDA 380

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           ++  G  GY +E  + R+ R +    I  G+     L
Sbjct: 381 IQIHGAYGYSDEYPVERYLRNARGAIIYEGTRELQEL 417


>gi|326576565|gb|EGE26472.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis
           101P30B1]
          Length = 608

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 84/500 (16%), Positives = 178/500 (35%), Gaps = 61/500 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVEFHPAWHALLRRSI 111
           L    E         L   A++    +      G+          V     +  +  +  
Sbjct: 27  LSAYAELDTDTINSYLEAAADFAQSVIAPLNRTGDIEGCQFNHGVVTTPTGFKEVYAQYC 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPR 169
             G      +  F  +    +  + +A   +M        M P ++  ++  +       
Sbjct: 87  ELGFPAINAEPEFGGLGLPVS--LSSAVSEMMGTANWSFAMYPGLSHGAIQTIEHHGIEV 144

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+ +  +  T             + LTE   G+D+  I ++     DG Y ++
Sbjct: 145 QKATYLEKMNTGAWSGT-------------MCLTESHAGSDLGIIKTRAVPNEDGSYAIT 191

Query: 230 GHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F+S+   D       I+LA++         +  F+VP+ + +     G  N +   
Sbjct: 192 GQKIFISAGEHDLTENIIHIVLARLPDAPAGTKGISLFIVPKFIVNDDGSVGERNTVSCG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +++K+G +++AT  + F +  G+L+G  N     +     +  L +AI  ++   ++  
Sbjct: 252 SIEHKMGIKASATCVMNFDHAKGYLIGPKNRGLNAMFTFMNVARLGTAIQGLAASELAFQ 311

Query: 334 EAIHYARRRHV------------SGGILIDQPVMKRAIADIALDIAAATALSFRL---AN 378
            ++ YA+ R              S   +I  P ++  +           AL + L   A+
Sbjct: 312 GSLTYAKERTAMRALSGVKEPNKSADSIIHHPAVRNMLLTQKAFSEGGRALVYYLSYFAD 371

Query: 379 SFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +  + ++ SE         ++ PI K +  K         ++  GG GYI E  + ++ R
Sbjct: 372 TVAKGENPSEVKFADEILSLLTPIAKAFLTKTGLESANMGVQVYGGHGYISEWGMEQNLR 431

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++  + +  G+     LD+L     G    +       + Q    +       +   +S 
Sbjct: 432 DTRISCLYEGTTEIQALDLLGRKVLGSQGRMLANFTQIIHQFCQENADN--DEVGQMVSK 489

Query: 494 CKEDKGLARFLTEKIALASS 513
             +     R LT +IA+ S+
Sbjct: 490 LAKLNQQWRDLTSRIAMQST 509


>gi|323495205|ref|ZP_08100289.1| isovaleryl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
 gi|323310564|gb|EGA63744.1| isovaleryl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546]
          Length = 389

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 136/378 (35%), Gaps = 26/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P     D+    P  + L       GL        +        AH +    +   
Sbjct: 29  QQIAPLAGEIDQANSFP--NQLWPLLGEMGLLGVTVSEQYGGAGMGYLAHVVAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +   A    + S    + +      +  + + PK+    +                L ++
Sbjct: 87  SASVALSYGAHSNLCVNQIFRNGNQQQREKFLPKLIDGSH-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + +   D         W  + P +D  ++ A+ E   G   +   + 
Sbjct: 134 EPNAGSDVISMQLKAELNGDHYLLNGSKMWITNGPDADVVVVYAKTEPDKGSHGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S +   + +  +K+G R + T EL F+N       +LG++N     +        +  
Sbjct: 194 ERSVSQFQHAQKLDKLGMRGSNTCELVFNNCPVPIENILGEVNQGVKVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   I Y   R   G  + +  +++  +AD+     AA A  + +AN+ 
Sbjct: 254 AAGPLGIMQACLDLVIPYVHDRKQFGRSIGEFQLVQAKVADMYTRSNAARAYVYAVANAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +  ++AA           +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DSGHASRKDAAG-------VILYSAELATQIALDAIQLLGGNGYINEFPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 367 EIGAGTSEIRRMLIGREL 384


>gi|120611270|ref|YP_970948.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589734|gb|ABM33174.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 388

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 136/406 (33%), Gaps = 29/406 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +  A  A      +L  +     +WD     P     + ++   G       
Sbjct: 2   DFELTEEQRAFADTAREFARAELAPH---AAQWDAEGIFP--REAIAKAGALGFCGLYAP 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +   +   +                    ++    +  M+    T  V   W P + S 
Sbjct: 57  ENAGGLALPRLDATLVFEEMAAIDPSTTAFITIHNMATWMLGTWATDAVRNHWGPLLTSG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                               LTE   G+D A++ ++ + + +         +   +  +D
Sbjct: 117 -------------QKLASYCLTEPGAGSDAASLKTRAELVGNEYVINGAKAFISGAGSTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             +++A+      G   +          G+ Y + + K+G  S  T  + F +       
Sbjct: 164 VLVLMARTGSPDSGAGGISAFAVPADAAGIQYGKKEEKMGWNSQPTRTISFDSVRIPADH 223

Query: 301 DLNVST-GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    MK L    ++ A  SV   + +L  A  Y + R   G  +     ++ 
Sbjct: 224 LLGAGGEGFKIAMKGLDGGRINIATCSVGAAQGALNAAQQYMQDRKQFGKAIASFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A ++ AA  +    A+  D        A  A     + K +       V+ EA++
Sbjct: 284 KLADMATELVAARQMVRLAASKLDAG------ARDASTYCAMAKRFATDAGFDVVNEALQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG GYI E  + R  R++  + IL G+   M + +   +  G  
Sbjct: 338 LHGGYGYIREYPLERLLRDARVHQILEGTNEIMRVIIARRMLDGGA 383


>gi|118462433|ref|YP_881859.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254820075|ref|ZP_05225076.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
 gi|118163720|gb|ABK64617.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 380

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 136/401 (33%), Gaps = 33/401 (8%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHA-LLRRSIHDGLHCSIW 120
             + +  A+EL R+A +     L          D+ E +  +   +       GL     
Sbjct: 5   RLLPTPEARELVRLAADVADKVLDPI------VDEHEKNETYPEGVFATLGETGLLTLPH 58

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +    +     ++               +S  V S   +    T    ++W P +  
Sbjct: 59  PEQWGGGGQPYEVYLQVLEELAARWAAVAVAVSVHVLSCHPLIAFGTDEQQQEWLPTMLG 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                L+E + G+D AA+T +      G        W     ++
Sbjct: 119 GH-------------TIGAYSLSEPQAGSDAAALTCKATATDGGYRVNGAKAWITHGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
           D + + A+     G   +   L D    GL + + + K+G  +  T    + N       
Sbjct: 166 DFYSLFART--GEGGQGISCFLVDKDTEGLTFGKPEEKMGLHAIPTTTAHYDNALVSAQR 223

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G                 L  A ++V   + +L EA+ YA++R   G  +ID   +  
Sbjct: 224 RIGAEGQGLQIAFSALDSGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + +A A     A   D     S  A+ A+++A          A  V  +A++
Sbjct: 284 LLADMAAAVDSARATYLDAARRRDAGLPYSRNASVAKLIA-------TDAAMKVTTDAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY  +  + R+ RE+    I  G+     L +   L
Sbjct: 337 VFGGYGYTRDYRVERYMREAKITQIFEGTNQIQRLVIGRSL 377


>gi|303237822|ref|ZP_07324379.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           disiens FB035-09AN]
 gi|302481968|gb|EFL45006.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           disiens FB035-09AN]
          Length = 574

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 82/433 (18%), Positives = 160/433 (36%), Gaps = 47/433 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +  L+ +   GL      R +  +          + +   A     ++ S        + 
Sbjct: 92  YENLKATRQAGLWGVSMPRQYGGLNLPNVVFSMLSEMISAADGGFQNIWSLQSC-IDTLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
                     + P+I + E               + + LTE   G+D+  +  +      
Sbjct: 151 EFGNDEQRAKYIPRICNGE--------------TMSMDLTEPDAGSDLQRVMLKATFDEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +  + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G 
Sbjct: 197 ENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDGRGLSMFIYDKRNGGVDVRHIEHKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L GD  +     V  +     L  A  SV     +  E ++YA+
Sbjct: 257 HGSPTCELVYKNAKAELCGDTKMGLIKYVMALMNGARLGIAAQSVGVASEAYKEGLNYAK 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA---------- 390
            R   G  +I  P +   ++ +   + A  +L ++ A   D  K+  + A          
Sbjct: 317 ERAQFGKKIITFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIARDQKLTAEER 376

Query: 391 -------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A    P+ K    + A     +++   GGSG+I E    R YR++   SI 
Sbjct: 377 QEMKKYKRLADAFTPLAKGINSEYANQNAYDSISIHGGSGFIMEYKCQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            G+    V+  +  +  GT L       E+      +DL +  +++I +  +++   K  
Sbjct: 437 EGTTQLQVVAAVRYIINGTYLNIMKEMLEENVCDCMKDLKTRVERMIALYEEALEKVKAS 496

Query: 498 K------GLARFL 504
           +       LAR L
Sbjct: 497 ECQDTIDFLARRL 509


>gi|187479665|ref|YP_787690.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424252|emb|CAJ50805.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 381

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        +  +    A ++     L   +        +     +  + L  +  
Sbjct: 45  RELGLFGLSISPEYGGLGLTMAEEVEVVFELGQTSPAFRSLAGTNIGIGSQAIVLAGSET 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E             +     LTE   G+D  AI +   +  D      
Sbjct: 105 QRRHYLPRLASGE-------------LIGAFALTEPDAGSDAMAIRTTATRDGDHYILNG 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
             ++  ++P++  F ++A+         +   L +    G+   R   K+G     T ++
Sbjct: 152 TKRYITNAPIAGLFSVMARTAPERRADSISCFLVEAGTPGITLGRPDKKMGQAGALTCDV 211

Query: 290 EFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N              +G    M++L    L  A + V   +  + +A  YA+ R   
Sbjct: 212 VFDNCRVPASALLGEQEGSGFRTAMRVLDKGRLHIAALCVGIAQRLIRDATRYAQDRQQF 271

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + +  +++  +AD   +  AA  +    A   D  ++ + EAA A++       +  
Sbjct: 272 GKPIAEFQLVQAMLADSQAECYAARCMVLDAARKRDRGENTTMEAACAKM-------FAT 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +M   V   A++  GG+GY+ E ++ R YR+     I  G+     L +   + K 
Sbjct: 325 EMVGRVADRAVQIHGGAGYMAEYAVERFYRDVRLFRIFEGTTQIQQLLIAREMLKA 380


>gi|254821027|ref|ZP_05226028.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 386

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 140/382 (36%), Gaps = 31/382 (8%)

Query: 84  LHAY-GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           L  +  P  + W+K +       L   +   G         +                  
Sbjct: 27  LERHVAPYHDEWEKAKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNPDFRYNTIITEET 84

Query: 143 MA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            A      G  +   + +  ++AL  T    + W PK  + E             +   +
Sbjct: 85  TAGRYSGIGFGLHNDIVAPYLLAL-ATEEQKQRWLPKFCTGE-------------LITAI 130

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+  I ++  K  D  Y L+G K F+++ + SD  I++AQ +   G     
Sbjct: 131 AMTEPGTGSDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
            L  +    G    R  +KIG  +  T EL F++        L     G +  M+ L   
Sbjct: 190 LLAVERGMEGFERGRHLDKIGLDAQDTAELSFTDVKVPAENLLGQEGMGFIYLMQNLPQE 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  AIM+ + M   L + + Y + R   G  +      +  +A++A +      +    
Sbjct: 250 RISIAIMAAAAMEQVLEQTLQYTKERKAFGKPIGSFQNSRFVLAELATEATVVRLMVDEF 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                + K  +E+AA A+        +C +    +I   ++  GG GY+ E  +AR Y +
Sbjct: 310 VRLHLDHKLTAEQAAMAKW-------YCTEKQVHLIDRCLQLHGGYGYMREYPVARAYLD 362

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +   +I  G+   M   +   L
Sbjct: 363 ARVQTIYGGTTEIMKEIIGRSL 384


>gi|268576739|ref|XP_002643349.1| Hypothetical protein CBG15946 [Caenorhabditis briggsae]
 gi|300680836|sp|A8XNF0|ACAD1_CAEBR RecName: Full=Probable medium-chain specific acyl-CoA dehydrogenase
           1, mitochondrial; Short=MCAD; Flags: Precursor
 gi|187026808|emb|CAP34381.1| hypothetical protein CBG_15946 [Caenorhabditis briggsae AF16]
          Length = 417

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 122/379 (32%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P    ++R++   GL        +                        
Sbjct: 52  PNAAKFDESGEFP--WEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGL 109

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V +       K +                +    +     +TE   G
Sbjct: 110 QLGIMGPSLAIAPVYIAGNEEQKKKYL-------------GALAAEPIIASYCVTEPGAG 156

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++ +K  D         W      +  F +LA+ +              + DG
Sbjct: 157 SDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFFVLARSDSDPKAPAGKAFTAFIVDG 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------LIYLD 319
              G+   + +  +G R + T  + F +         NV   P    K+      +    
Sbjct: 217 DTPGISRGKKEKNMGQRCSDTRTITFEDVRVPA---ENVLGAPGAGFKVAMGAFDMTRPG 273

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++      L E+  YA +R   G  + +   ++  +AD+A+++  A  ++++ A  
Sbjct: 274 VAAGALGLAWRCLDESAKYALQRKAFGTEIANHQAVQFMLADMAVNLELARLITYKSATD 333

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A      A++  GG+G+  E  + +  R++  
Sbjct: 334 VDNKVRSS-------YNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKI 386

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  +L
Sbjct: 387 YQIYEGTSQIQRIVISRML 405


>gi|21221230|ref|NP_627009.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256787588|ref|ZP_05526019.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771481|ref|ZP_06530859.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|5524294|gb|AAD44195.1|AF142581_1 acyl-CoA dehydrogenase [Streptomyces coelicolor]
 gi|7544043|emb|CAB87216.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289701680|gb|EFD69109.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 386

 Score =  253 bits (647), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 151/403 (37%), Gaps = 35/403 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   +EL R          A+     +  D  E H   + ++R     GL    +   +
Sbjct: 5   LSPELEELRRTVEQF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEY 59

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +     A  +    L  +    A  L +     A  + L  T    ++W P++ S E 
Sbjct: 60  GGMGGDYFALGVALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKREWLPRLCSGE- 118

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD- 241
                       +    GLTE  GG+D  A  +  +       + ++G K F+++  +D 
Sbjct: 119 ------------ILGAFGLTEPDGGSDAGATRTTARLDEATNEWVINGTKCFITNSGTDI 166

Query: 242 -AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
              + +  V GR   G  L+  ++      G       +K+G  ++ T EL F++     
Sbjct: 167 TGLVTVTAVTGRKPDGRPLISSIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADVRVPA 226

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L  +  G  + ++IL    +  A +     +  + E++ YA+ RH  G  +     +
Sbjct: 227 ANLLGELGRGYAQFLRILDEGRVAIAALGTGLAQGCVDESVAYAKERHAFGRPIGANQAI 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ +    A       A+     +   +EAA A       K +   +A     +A
Sbjct: 287 QFKIADMEMKAHTARLAWRDAASRLVAGEPFKKEAALA-------KLYSSTVAVDNARDA 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG G++ E  +AR +R++    I  G+     + +   L
Sbjct: 340 TQVHGGYGFMNEYPVARMWRDAKILEIGEGTSEVQRMLIAREL 382


>gi|330504164|ref|YP_004381033.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328918450|gb|AEB59281.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 379

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 73/387 (18%), Positives = 129/387 (33%), Gaps = 36/387 (9%)

Query: 87  YGPGGERWDKVEFH--PAWHAL-------LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                   DK       AW           R++   G      D  +     K     + 
Sbjct: 14  RDAFAAFLDKEVVPNQEAWEEAGVVDRSVWRKAGEMGFLLPWADEEYGGAGLKDFRYEQI 73

Query: 138 ARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
               L    E G ++   S      VA            P I S E              
Sbjct: 74  MCEELARINEPGFMLPLHSALCGPYVAEYGNAEQKARLLPGIISGE-------------T 120

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
            + + +TE   G+D+A + +      D  + L+G K F+S+   +D  I+ A+ +     
Sbjct: 121 ILAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADVVIVAAKTDPANKH 179

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            +    L +    G    +   K+G  S  T EL F++        L  + G    +  +
Sbjct: 180 AM-GLFLVERGMPGFERGKKLKKLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYLMNM 238

Query: 316 ---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L +A  +V+G   +L   I Y R R   G  +      +  +A++   I  A   
Sbjct: 239 LAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVAQVF 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R     ++ K   E       +A   K +  ++   V+ E ++  GG GY+ E  I +
Sbjct: 299 TDRCVMDHNQKKLTPE-------VAAEAKLFTTELLGKVVDEGVQLHGGWGYMWEYPICK 351

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE 459
            Y  +    I  G+   M   +   ++
Sbjct: 352 MYANARIQRIFAGTSEIMKEIISRGMK 378


>gi|301059293|ref|ZP_07200220.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300446522|gb|EFK10360.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 375

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 24/294 (8%)

Query: 176 PKIFSR-EYDPTNKAPMQK-TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           P IF+  E       PM       +G  +TE   G+D+ AI    +K  D  Y L+G K 
Sbjct: 96  PLIFAGNEAQKRKFCPMISHGRKLMGYLVTEPEAGSDVQAIRCTARKSGDH-YVLNGRKV 154

Query: 234 FLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F ++  ++  + +LA+     G   +   + +    G+   R++ K G R + T E+   
Sbjct: 155 FATNGSVAGLYSVLAKT----GEKELSFFMVERDREGISIGRIEEKCGFRGSNTAEVILE 210

Query: 293 NTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +         N+   P E  KI +          A +S+     +L   + YAR R   G
Sbjct: 211 DVKVPA---ENLIGRPGEGFKIAMGDFDMSRPAVAALSLGLAEGALDYTVEYARNRQTFG 267

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI+   ++  +AD A  I A+  L  + A +FD  +  ++       +A + K++C  
Sbjct: 268 KPLIEHQAIQFLLADAATLIEASRGLMEQAAVAFDSGRKNTK-------LASMAKFFCSD 320

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  +  + ++ +GG GYI +  I R +R++    I  G+     + +   + K
Sbjct: 321 AAMKITTDMVQVLGGYGYIRDYPIERMFRDAKLTQIFEGANQIQRMIIGREISK 374


>gi|205375488|ref|ZP_03228276.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 450

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 147/412 (35%), Gaps = 39/412 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           ++   + L   A           P     +  EF      LLR +   GL        + 
Sbjct: 29  VTDEQRMLMETAKRFVE--DRVDPYRSAIEDGEFDEV-VRLLREAGELGLLAHSVPEVYG 85

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREY 183
            +   +    +     +  +     +     +  +   +    T +  + + PK+ S EY
Sbjct: 86  GLGLNK--VTKGIVGEMTGRTSGYGVAHSNHTCIATLPITYFGTEKQKQKYLPKLASGEY 143

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSD 241
                             LTE   G+D  A  ++    ++G  Y L+G K ++++   SD
Sbjct: 144 -------------IGAYCLTEPNAGSDALASKTKAILNNEGSHYILNGTKIYITNASFSD 190

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            FI+ A+V+G+         + +    GL     + K+G + ++T  +   +        
Sbjct: 191 TFIVYAKVDGQH----FTAFIVEKGFPGLVIGPEEKKMGIKGSSTCSVLLEDCLVPKENV 246

Query: 302 LN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  +  G V  +    L   +    ++ G   +L   + + + R   G  + D P  K  
Sbjct: 247 LGEIGKGHVIALNVLNLGRYNLGFAAMGGAIHALDTTMAFIKERKQFGRRISDFPASKEK 306

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAY----------ARIMAPITKYWCCKMA 408
           I  +A  I AA ++ +R     D      +E A             +   I K +  +  
Sbjct: 307 IIKMAARIFAAESIQYRTGGLLDSRLEGLKENALPKEVAAGLMEYIMECAICKVYGSETL 366

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             V+ E ++  GG+GYI E  I + YR+S  N I  G+     L +   L K
Sbjct: 367 DMVVDEGLQLHGGAGYIAEYPIEQMYRDSRINRIFEGTNEINRLVLPTQLLK 418


>gi|226954494|ref|ZP_03824958.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226834765|gb|EEH67148.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 387

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 139/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +   A  
Sbjct: 29  PFVNEWDEAETFP--RELYKKAAEIGLLGLGFGEEYGGIPDADPFYSLLAGVEMAKAASG 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P I S E                 L +TE  
Sbjct: 87  GVHISLMVHTIGAPPIQHFGSEELKAKVLPDIISGE-------------KISALAITEPG 133

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 134 GGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGADGISMLLVD 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 193 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFLG 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  L+D  V++  + D+A  +    AL    A    
Sbjct: 252 VVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLEETAWKMT 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +    + A       + K    +        A++ +GG G++      R YRE   N 
Sbjct: 312 QPQL---QGADLVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 369 IGGGAEEIMKDLISKQL 385


>gi|116049236|ref|YP_791961.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892742|ref|YP_002441611.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254239657|ref|ZP_04932979.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192]
 gi|296390335|ref|ZP_06879810.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|115584457|gb|ABJ10472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126193035|gb|EAZ57098.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192]
 gi|218772970|emb|CAW28782.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 606

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 92/494 (18%), Positives = 172/494 (34%), Gaps = 61/494 (12%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A++       L H+    G   +  +V     +       +  G      
Sbjct: 37  DMVDAILGECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPKGYKEAYEAYVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKI 178
              +          + A +  +M        M P  S+ + + +    T    + +   +
Sbjct: 97  PVEYGGQGLP--MSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLVPL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS 
Sbjct: 155 TEGRWGGT-------------MCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSG 201

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G  NG+    L+ K+G +
Sbjct: 202 EHDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R
Sbjct: 262 ASATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARER 321

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRS 387
                             L+    ++R +           AL +     A+   +    +
Sbjct: 322 RSMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILSN 381

Query: 388 EEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           ++A Y R       + PI K    ++        M+  GG GYI E  + +  R++   +
Sbjct: 382 DDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIAT 441

Query: 442 ILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L    LL             + +      K    +   ++ L K   
Sbjct: 442 LYEGTTGIQALDLLGRKVLLMTQGKAVRDFTRGVARFAVDLLKNEPRMRGRALVLLK-LC 500

Query: 499 GLARFLTEKIALAS 512
                LT +IAL +
Sbjct: 501 AQWNLLTLRIALTA 514


>gi|167568133|ref|ZP_02361049.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
 gi|167568238|ref|ZP_02361112.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 378

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 138/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW+   +      + R++   G HC+    ++        + +        A    
Sbjct: 28  PHHERWEDQGYVD--RDVWRKAGEAGYHCASMPEAYGGAGADIRYSVVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +  + + + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGSDALKEHYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTAAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTEM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +L+  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALSWTLDYTRDRRAFGKAVIDFQTSRHALAELKSEIQVGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW  ++   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|15596481|ref|NP_249975.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|313106269|ref|ZP_07792514.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9947219|gb|AAG04673.1|AE004558_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|310879016|gb|EFQ37610.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 606

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 92/494 (18%), Positives = 172/494 (34%), Gaps = 61/494 (12%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A++       L H+    G   +  +V     +       +  G      
Sbjct: 37  DMVDAILGECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPKGYKEAYEAYVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKI 178
              +          + A +  +M        M P  S+ + + +    T    + +   +
Sbjct: 97  PVEYGGQGLP--MSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLAPL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS 
Sbjct: 155 TEGRWGGT-------------MCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSG 201

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G  NG+    L+ K+G +
Sbjct: 202 EHDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R
Sbjct: 262 ASATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARER 321

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRS 387
                             L+    ++R +           AL +     A+   +    +
Sbjct: 322 RSMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILSN 381

Query: 388 EEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           ++A Y R       + PI K    ++        M+  GG GYI E  + +  R++   +
Sbjct: 382 DDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIAT 441

Query: 442 ILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L    LL             + +      K    +   ++ L K   
Sbjct: 442 LYEGTTGIQALDLLGRKVLLMTQGKAVRDFTRGVARFAVDLLKNEPRMRGRALVLLK-LC 500

Query: 499 GLARFLTEKIALAS 512
                LT +IAL +
Sbjct: 501 AQWNLLTLRIALTA 514


>gi|83956186|ref|ZP_00964639.1| probable acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|84503311|ref|ZP_01001389.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|163747307|ref|ZP_02154661.1| Acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|83839572|gb|EAP78752.1| probable acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|84388365|gb|EAQ01315.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|161379417|gb|EDQ03832.1| Acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 137/383 (35%), Gaps = 36/383 (9%)

Query: 89  PGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  +R  D+    P    L+      GL        F  +      +++AA  +++ Q  
Sbjct: 25  PYEDRVADEDVIPPM---LVDEIRMMGLFGMSIPEDFGGLGLSMIEEVQAA--FVLGQAS 79

Query: 148 AGH---LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 + + +   +  + +  T      + P + S +                   LTE
Sbjct: 80  PAFRSLVGTNNGIGSQGIIIDGTDEQKAQYLPALASGDM-------------IASFALTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLE 263
              G+D  ++ +  ++  +        ++  ++P +D F + A+      G   V   L 
Sbjct: 127 PDAGSDAGSLRTTARRDGNDFLLNGTKRYITNAPRADLFTVFARTNPEAEGSAGVSAFLV 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
           +    G+   +   K+G + + T ++   N        +       +  K  +       
Sbjct: 187 EAGTPGITLGQPDRKMGQKGSHTCDVILDNVRVPAANIIGGPDRLNKGFKTAMKVLDRGR 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  + + V      + +++ YA  R   G  + ++ +++  +AD   +  AA  +    A
Sbjct: 247 LHISAVCVGAAERLIRDSLSYAMERKQFGEPIAEKQLIQAMLADSRAEAFAARCMIEETA 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  ++ S +AA         K +  +M   V   A++  GG+GY+ E ++ R YR+ 
Sbjct: 307 RRKDAGQNVSTDAA-------CCKMFASEMVGRVADRAVQIHGGAGYMAEYAVERFYRDV 359

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     + +   + +
Sbjct: 360 RLFRIYEGTTQIQQILIARNMIR 382


>gi|308493571|ref|XP_003108975.1| hypothetical protein CRE_11824 [Caenorhabditis remanei]
 gi|308247532|gb|EFO91484.1| hypothetical protein CRE_11824 [Caenorhabditis remanei]
          Length = 411

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 121/379 (31%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++DK    P    ++R++   G    I    +        +               
Sbjct: 46  PNAVKYDKSGEFP--WDIVRQAHQLGFMNPIIPEKYGGPGMDGFNTCLIVEALSYGCTGI 103

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V L  +    K +                +    +     +TE   G
Sbjct: 104 QLAIVGPSLAVAPVFLSGSEEQKKKYL-------------GMLAAEPIIASYAVTEPGAG 150

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++  K  D         W      +  F +LA+ +              + DG
Sbjct: 151 SDVNGVKTKAVKKGDEYVINGSKAWITGGGHAKWFFVLARTDDDPKAPAGKAFTAFIVDG 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G+   + +  +G + + T  + F +         N+   P    K+ +         
Sbjct: 211 DTPGITRGKKEENMGQKCSDTRTITFEDVRVP---KENILGAPGAGFKVAMGAFDLTRPQ 267

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V      L E+  YA  R+  G  + +   ++  +AD+A+++  +   ++R A  
Sbjct: 268 VAAGAVGLAWRCLDESCKYALERNAFGTPIANHQAIQFMLADMAINLELSRLYTYRAAAE 327

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A    A A +  GG+G+  +  + +  R++  
Sbjct: 328 SDAGGVSS-------YNASIAKCFAADTANIAAANACQIFGGAGFNCDYPVEKLMRDAKI 380

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 381 YQIYEGTSQIQRMVIARTL 399


>gi|271967603|ref|YP_003341799.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270510778|gb|ACZ89056.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM
           43021]
          Length = 386

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 138/380 (36%), Gaps = 28/380 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++   +P    ++ R    GL        +  +   +              +  
Sbjct: 26  PVASEWERTGRYPT--EIVERFKQMGLFGMTIPEQYGGLALDRVSFALVFEEIARGWMGV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++     ++ M+A   T      + P + +              +   G+ LTE   G
Sbjct: 84  AGVLGSHSLASWMIAEHGTDEQRDAYLPDLATG-------------ARRTGIALTEPAAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSP 267
           TD+  I ++  +  D         W  ++  +D   +L +          +  +L +   
Sbjct: 131 TDLQGIQTRAVRDGDHYVINGTKTWITNARHADPMPVLVKTSVTEPAHRGMSLILVEAGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIM 323
            G    R   K+G +   T E+   +        L G              L  ++ A  
Sbjct: 191 PGYTVSRDLPKLGYKGTETCEIVLEDVRVPASRLLGGVEGRGMQQALSALELGRVNIAAR 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + +   A++Y+R RH  G  + D   ++  +AD+A DI AA  L++  A   +  
Sbjct: 251 AVGISQCAYDAALNYSRERHAFGHPIADFQAIQLKLADMATDIQAARLLTYWAATRSESG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              SE        A + KY+  ++A  V  EAM   GG GY +E  I R YR++P  +I 
Sbjct: 311 AVNSE--------AAMAKYFASEVALRVTMEAMRIHGGYGYSQEFVIERLYRDAPLMAIG 362

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+ +   + +   L  GT 
Sbjct: 363 EGTNDVQRMVIARSLISGTA 382


>gi|186472764|ref|YP_001860106.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195096|gb|ACC73060.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 596

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 91/466 (19%), Positives = 180/466 (38%), Gaps = 62/466 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLR 108
               E  G        +E +++       L      G+R        KV   P +    R
Sbjct: 26  LPGFEEAGLETAQAVLEESSKLC---GEVLAPLNVEGDRNPSTWKDGKVTASPGFADAFR 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-- 166
           +    G         +E     +   I  A + ++        + P +T  ++ AL+T  
Sbjct: 83  QFAAGGWQGVQHPAEYEGQGLPK--LIGTACIEMLNASNLAFALCPLLTDGAIEALLTAG 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + P++ S ++  T             + LTE + G+D+A + ++ +   DG Y
Sbjct: 141 SEEQKQTYVPRLISGDWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270
            + G K F++    D       ++LA+          +  F+VP+ L       G  N +
Sbjct: 188 RIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVVPKFLVHADGSLGERNDV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               +++K+G +++ T  L+F +     G L+G+ N     +  M         +  V+ 
Sbjct: 248 HCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGVAI 307

Query: 328 MRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              +  +A  YA+ R  S            +I  P ++R ++ +      + AL++  A 
Sbjct: 308 SDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRMLSTMRALTEGSRALAYVAAA 367

Query: 379 SFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             D A   +++A  A  +A      PI K W  +++  V +  ++  GG G+IEE   A+
Sbjct: 368 HSDIAHHHADQAKRAEHLAIYEYLVPIVKGWSTELSVDVTSLGVQVHGGMGFIEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
           +YR++    I  G+       L     L  G  + + L + + Q +
Sbjct: 428 YYRDARILPIYEGTTAIQANDLVGRKTLRDGGAVAKALLADIAQTV 473


>gi|145588701|ref|YP_001155298.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047107|gb|ABP33734.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 595

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 102/553 (18%), Positives = 200/553 (36%), Gaps = 86/553 (15%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--------DK---------VEF 99
           EL  L E V   T  E     +     L       +          D+         V  
Sbjct: 16  ELAGLSEVVAYPTYAEAGADVDLAPAILEEAAKFNQDVVAPLNWPGDQNPSSFKEGVVTT 75

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +     +    G    +    F      +   I  A   ++        + P +T  
Sbjct: 76  APGFKEAFEQFGSAGWQGVVHPAEFGGQGLPK--LIATACFEMVHSASLSFALCPMLTDG 133

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  +P + + + P + S E+                + LTE + G+D++ + ++
Sbjct: 134 AIEALLTAASPELLERFVPNMISGEW-------------TGSMCLTEPQAGSDLSMVRAR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
                +G Y + G K +++    D       ++LA+          +  F+VP+ L +  
Sbjct: 181 AVPEGNGAYKIFGTKIYITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVVPKFLVNAD 240

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G  N +    +++K+G +++ T  L+F +     G+L+G+ N     +  M      
Sbjct: 241 GSLGDRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRGLEYMFVMMNAARF 300

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS----GGI----LIDQPVMKRAIADIALDIAAAT 370
              +  ++    +  +A+ YA+ R  S    G      +I QP +KR +  +     A+ 
Sbjct: 301 AVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKRMLMTMRAYTEASR 360

Query: 371 ALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL++  A ++D   +  +EA      A    + PI K +  +M+  V +  ++  GG G+
Sbjct: 361 ALAYYAAAAYDAQHADPDEAVKKANQAIYEFLVPIVKGFSTEMSIEVASLGVQVHGGMGF 420

Query: 425 IEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           IEE   A+HYR++   +I  G+       L     +  G    + L   + +    + K+
Sbjct: 421 IEETGAAQHYRDARILTIYEGTTAIQANDLVGRKTVRDGGATAKVLSQKIAE----TEKE 476

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI----ADVFLENRFL--- 535
           +            +   LAR      A   + A +     +D+    A  F   R     
Sbjct: 477 LAASSSADAQAVLKQLTLAR-----AAFEEAVAYILANAKSDVKAVYAGSFAYLRLAGLV 531

Query: 536 -DNCHSTHCMLHG 547
                    +L  
Sbjct: 532 LGGWQMARGLLAA 544


>gi|167905755|ref|ZP_02492960.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
 gi|254182383|ref|ZP_04888978.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|184212919|gb|EDU09962.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
          Length = 377

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|311107961|ref|YP_003980814.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762650|gb|ADP18099.1| acyl-CoA dehydrogenase, N-terminal domain protein 13 [Achromobacter
           xylosoxidans A8]
          Length = 384

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 141/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW K +   A   +  ++   GL C     ++       AH+         A +  
Sbjct: 30  PDEERWRKQQH--ADREVWNKAGRLGLLCVSMPEAYGGGGGSFAHEAIVGAEQARAMVHG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    T    + W P++ + E             +   + ++E   G
Sbjct: 88  FSNNVHSAILAHYILNYGTEAQKQRWLPRMATGE-------------LVGAIAMSEPGAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDG-S 266
           +D+ ++ +   K   G Y L+G K F+++ +    + ++A+ + + G   V  ++ +   
Sbjct: 135 SDLKSVRTTATKEG-GEYVLNGSKTFITNGLHADLVCVVAKTDAQAGARGVSLIMVETQG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAI 322
             G    RL  K+G +S  T EL F          L G        +        L  A+
Sbjct: 194 LAGFRRGRLLEKLGQKSLDTAELFFDGARVGQDCLLGGIEGRGFAQLMQQLPRERLLIAV 253

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+ MR ++ E + YA  R V G  LI+    +  +A+       A       A   D+
Sbjct: 254 GAVATMRRAIEETVAYASTRQVFGQALIELQNTRFKLAECETVATIA-------ARFVDD 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R          A + K+W  +M   VI E ++  GG GY+ E  IAR Y ++    I
Sbjct: 307 CIERQLAGTLDLSTAAMAKWWTTQMNCQVIDECLQLHGGYGYMLEYPIARMYADARVGKI 366

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   +
Sbjct: 367 YGGSNEIMKEIIARAM 382


>gi|265992519|ref|ZP_06105076.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|265998986|ref|ZP_05464560.2| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|262763389|gb|EEZ09421.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|263091706|gb|EEZ16049.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 381

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 125/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +      ++R    L   +      + + +   +  + 
Sbjct: 40  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVRVGFELGYTSPAFRSVIGTNNGIGSQGII 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 100 ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 147 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLAERDLPGLTVGTPDHKMGQRG 205

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 206 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 266 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 320 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 379

Query: 460 K 460
           +
Sbjct: 380 R 380


>gi|222053281|ref|YP_002535643.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221562570|gb|ACM18542.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 583

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 77/426 (18%), Positives = 154/426 (36%), Gaps = 39/426 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R+    GL  +     +  +  ++   +        A          +      +    
Sbjct: 65  MRQCADLGLFLAEVPEEYGGLELEKTTNMLMIEKVAPATSFCMAFGGHTGIGILPMVYYG 124

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225
           T    + +  K+ S E+                  LTE   G+D  +  +     +DG  
Sbjct: 125 TADQKERYLEKLSSGEWFG-------------AYALTEPDCGSDPLSSRTTATLSADGRH 171

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +D F + A+++G          L + S  G      + K+G R +
Sbjct: 172 YILNGTKQFITNSAFADLFTVFAKIDG----LHFSAFLVEKSFEGFSVGAEEKKMGLRGS 227

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +T +L   N       LLG+         ++  +  L  A  ++   + +  EA  YA  
Sbjct: 228 STTQLVLDNVKVPVENLLGEPGKGHKIAFNVLNVGRLKVATQALGMSKGAFGEAASYATE 287

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSEE 389
           R   G  + +   ++  +AD+   I A+  + +R+A   D              +   + 
Sbjct: 288 RKQFGRTIGEFGAIREKLADMTAAIFASETVIYRVAGLLDSRLALLDHSGSDYYERYQKA 347

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    I K +C +    V+ EA++  GG GYI E  + R+YR+S    I  G+   
Sbjct: 348 IEEYAAECAIAKVFCTEQLDMVVDEAVQIHGGYGYIAEYPVERYYRDSRIQRIFEGTNEI 407

Query: 450 MVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
             + +  +L  K  N    L+  +++    + +  +T    +         +AR     +
Sbjct: 408 NRILIPTMLFRKADNSGSPLWKLVKK----AEEGAVTETAYAGEFTAAATTVARLKQLFL 463

Query: 509 ALASSA 514
            +  +A
Sbjct: 464 TMVGAA 469


>gi|326922425|ref|XP_003207449.1| PREDICTED: LOW QUALITY PROTEIN: long-chain specific acyl-CoA
           dehydrogenase, mitochondrial-like [Meleagris gallopavo]
          Length = 455

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 125/373 (33%), Gaps = 34/373 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         L  ++   GL           +              +         
Sbjct: 100 FHAEWEKDGQVSRELWEKAGQQGLLGVAIAEKHGGIGADILSSAVLWEEQMYVNCTGPGF 159

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +A   T    K + P++ + +                 + +TE   G+D+
Sbjct: 160 SLHSDIVMPYIANYGTEEQIKHFIPQMAAGKC-------------IGAIAMTEPGAGSDL 206

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
             + +  +K     + L+G K F+++  M D  I++     E R     +   L +    
Sbjct: 207 QGVRTYAKKDGSD-WILNGSKTFITNGWMCDVVIVVTVTNREARSPAHGISLFLVENGTK 265

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   KIG ++  T EL F +       LLG  N     +        L  A M++
Sbjct: 266 GFTKGRKLEKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAELPQERLLIADMAL 325

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +G      E  +Y R+R   G  +     ++  +A++  +I    A         D    
Sbjct: 326 AGCEFMFEETRNYVRQRKAFGKTVAHLQTVQHKLAEMKTNICVGRAF-------LDNCLE 378

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E       A + KYW   +  +V  + ++  GGSGY+ E  IA+ + ++    I  G
Sbjct: 379 LHSEKRLDSPTASMAKYWASDLQNSVATQCVQMHGGSGYMWEYPIAKAFVDARVQPIYGG 438

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   +
Sbjct: 439 TNEIMKELIAREI 451


>gi|163732077|ref|ZP_02139523.1| isovaleryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161394375|gb|EDQ18698.1| isovaleryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 387

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 140/406 (34%), Gaps = 31/406 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +    +L   AN     +H +      P     D+    PA   L R     GL     D
Sbjct: 4   AAMQFDLGEDANALRDMVHRWAQERVAPLAAEIDEKNDFPA--DLWREMGDLGLLGITVD 61

Query: 122 RSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             F        AH I    +   +   +    + S    + + L  T    + + PK+ S
Sbjct: 62  EQFGGAGMTYLAHTIAIEEIARASASVSLSYGAHSNLCVNQINLNGTAAQKEKYLPKLIS 121

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                         +    L ++E   G+D+ ++  + +K +D         W  + P +
Sbjct: 122 G-------------AHVGALAMSEAGAGSDVVSMKLRAEKRNDHYRLNGNKYWITNGPEA 168

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
              ++ A+ +   G   +   + +    G       +K+G R + T EL F +       
Sbjct: 169 STLVVYAKTDPDAGAHGITAFIVEKEMAGFSTSPHFDKLGMRGSNTAELIFDDVEVPFEN 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG+       +        +  A +    M   +   + Y   R   G  +    +M+ 
Sbjct: 229 VLGEEGRGVAVLMSGLDYERVVLAGIGTGIMAACMDVVMPYLAERKQFGKPVGSFQLMQG 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+   + +A A  + +A + D      ++AA           +  + A     +A++
Sbjct: 289 KIADMYTAMNSARAYVYEVAKACDRGDVTRQDAA-------ACCLYASEEAMKQAHQAVQ 341

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +GG+G++ +   AR +R++    I  G+     + V   L     
Sbjct: 342 AMGGAGFLADSPAARLFRDAKLMEIGAGTSEIRRMLVGRELMAAMA 387


>gi|126732009|ref|ZP_01747812.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707541|gb|EBA06604.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 377

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 126/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C      +        H+         A L +      S   A  + 
Sbjct: 38  RETWTQAGELGLLCPSVPEEYGGAGGDFGHEAVILIEAARANLASWGHGIHSGIVAHYIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W PK+ + E             +   L +TE  GG+D+  + ++  +  +
Sbjct: 98  AYGTEEQKARWLPKMVTGE-------------LVGALAMTEPSGGSDVQNLKTRAVRDGN 144

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGN 281
            +Y LSG K F+++      I++A + +   G      ++ +     G    R   KIG 
Sbjct: 145 -VYRLSGQKTFITNGQHANLIVVAAKTDPSQGSKGTSLMVVETDGAAGFTRGRNLEKIGC 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F +        L      G  + MK L    L     +V  M+ ++   + 
Sbjct: 204 HAADTSELFFDDVALPPENLLGGEEGQGFYQMMKQLPQERLIIGCGAVGAMKGAMERTVR 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  +A+ A   + A A         D   +           A
Sbjct: 264 YCKEREAFGGPLTQFQNTRFKLAECATKTSVARAF-------LDACMADHLNGTLTVEKA 316

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW       V+ E ++  GG GY++E ++A  + ++    I  G+   M   +   
Sbjct: 317 AMAKYWLSDTQGEVLDECLQLHGGYGYMQEYAVAEMWTDARVQRIYGGTNEIMKELIARA 376

Query: 458 L 458
           L
Sbjct: 377 L 377


>gi|103488634|ref|YP_618195.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978711|gb|ABF54862.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 384

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 123/360 (34%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L  ++   GL C      +  +     +                     S    + + 
Sbjct: 45  KSLWPKAGELGLLCPTVPEEYGGLGLDFGYNAIVDEESAYYGRVTTGFSLQSDIVTNYIV 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K W PK+ S E             V   + +TE   G+D+  + +  +K  +
Sbjct: 105 RYGSEEQKKHWLPKMVSGE-------------VITAIAMTEPGTGSDLQGMRTTAKKDGN 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                    +  +   +D  ++  + +   R     V  +L +   +G    R  +KIG 
Sbjct: 152 HYVINGSKTYITNGQNADLILVCVKTDPDARPAWKGVSIVLVEADRDGFERGRNLDKIGQ 211

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
               T EL F++    +   L     G +  M  L    L  AI + +  + +  + + Y
Sbjct: 212 DEADTSELFFNDVRVPITNCLGEEGQGFIYLMSELPQERLSIAISAQASAQRAFDDTVEY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  ++D    +  +AD+   +    A         D A +R  +         
Sbjct: 272 TRERKAFGKPILDFQNSRFVLADLKAKLQVGWA-------HLDWALARHLKKELTPEEGA 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K W  ++   V+ + ++  GG+GY+ E  IAR +R +    I  G+   M   +   L
Sbjct: 325 AAKLWHTELQWEVMDKCLQLFGGAGYMNEYPIARAWRAARVTRIFGGTNEIMKELIGRKL 384


>gi|332847152|ref|XP_003315394.1| PREDICTED: LOW QUALITY PROTEIN: very long-chain specific acyl-CoA
           dehydrogenase, mitochondrial-like [Pan troglodytes]
          Length = 706

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 240 ILLFGTKAQKEKYLPKLASGE-------------AVAAFCLTESSSGSDAASIRTSAVPS 286

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 287 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 346

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 347 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 403

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 404 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 458

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 459 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRVFRIFEGTND 517

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 518 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 576

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 577 HXELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 630


>gi|307295790|ref|ZP_07575623.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878446|gb|EFN09667.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 592

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 78/451 (17%), Positives = 158/451 (35%), Gaps = 54/451 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +     +    G         +         +     +     +        + 
Sbjct: 71  VTVPPGFQEAYAQFREGGWPALTGPVEYGGQGLPFYLQYILTEIMAATCMSFAQYTGLTH 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A  +    +  +   + PK+ S E+  T             + LTE   GTD+  I +
Sbjct: 131 GAAMAIEAHASEELKALYLPKLISGEWSGT-------------MCLTESHSGTDLGLIKT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +     DG Y ++G K F+S+   +       ++LA++         +  FLVP+ L D 
Sbjct: 178 RAVPAKDGSYAITGGKIFISAGEHEMVDNIVHLVLAKLPDAPPGVRGISLFLVPKYLPDE 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G+ NG+    +++K+G +      + F +  G+L+G+ +     +  M  +  L  
Sbjct: 238 NGAPGARNGVSAGSIEHKMGMKGAVACVMNFEDATGWLVGEPHRGLHAMFTMMNVERLLL 297

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAA 368
           +        ++   ++ YAR R                  +I  P ++R +  +      
Sbjct: 298 SAQGQGAAELAYQSSLAYARDRVQGRALSGAKYPTLAADPIIVHPDVRRMLLTMKAHAEG 357

Query: 369 ATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             AL+  +    D A+       R + +    +M P+ K W            ++  GG 
Sbjct: 358 GRALALWVMKHVDIAERHPDPAEREKASDLVALMTPVVKVWLSDNGSEAANLGVQTFGGH 417

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL---- 476
           GYI E  + +  R+     +  G+     LD++   L  KG +L  +L   ++  +    
Sbjct: 418 GYIREWGMEQIVRDIRILQLYEGANGIQALDLVARKLPMKGGSLLLRLTDPIDAHIETYA 477

Query: 477 -GSSGKKVITILRDSISLCKEDKGLARFLTE 506
             +   + I  L    +  ++   L R   E
Sbjct: 478 SSADHAEFIQPLVAIRAKLEQATALLRAKAE 508


>gi|284029016|ref|YP_003378947.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808309|gb|ADB30148.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 384

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 135/382 (35%), Gaps = 32/382 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P   + ++ E  P      R     GL    +   +    +     ++       A
Sbjct: 25  HELAPYAAQAEETETFP--RTAFRTLGKAGLLGLPYPEQYGGADQPYEVYLQMLEEIAAA 82

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G  +S    ++  VA   T    +   P +   E             +     L+E
Sbjct: 83  WMSVGVGLSVHTMTSYAVATRGTDEQREQLLPDMIGGE-------------LLGAYALSE 129

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            + G+DI+A+T++  +  D         W      +D +   A+         +      
Sbjct: 130 PQAGSDISAMTTKAVRDGDEYVLTGTKAWITHGSQADFYTTFARTSADA-KHGISAFHVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIM 323
            S +GL +   + K+G   + T  + +           ++     + M+I L  LDS  +
Sbjct: 189 ASTDGLSFGAPERKMGLTGSTTTLVNYDRVRVPA---AHLIGAEGDGMRIALSALDSGRL 245

Query: 324 SVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   V LA+A           R   G  + D   ++  +AD+A  + +A A   + A 
Sbjct: 246 GIAACAVGLAQAALDCAAAYALERKQFGHAIADFQGLQFLLADMAAAVESARATYLQAAR 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +  +++AA       I K  C   A  V  +A++ +GG GY  +    R+ RE+ 
Sbjct: 306 RRDLGRPFTQQAA-------IAKLVCTDAAMKVTTDAVQVLGGYGYTRDFPAERYMREAK 358

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+     L +   L +
Sbjct: 359 VTQIFEGTNQIQRLVISRDLLR 380


>gi|254712837|ref|ZP_05174648.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254715906|ref|ZP_05177717.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261217668|ref|ZP_05931949.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261320545|ref|ZP_05959742.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|260922757|gb|EEX89325.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261293235|gb|EEX96731.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
          Length = 380

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 123/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGLDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERLIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|330972567|gb|EGH72633.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 383

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 141/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPYAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHAWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPALGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCVVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I AA  L+   A      ++   E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINAARLLTLHAARLRSAGQACLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|254451856|ref|ZP_05065293.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198266262|gb|EDY90532.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 378

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 81/400 (20%), Positives = 145/400 (36%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS     +  MA+    Q     P    WD     P    L  +    G        
Sbjct: 2   DFALSQEQNAIYDMAHAFGGQ--HIAPHARDWDAAGTIPG--DLWPKLAELGFGGLYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +       +            +       +S     A M+    +  +     P + S E
Sbjct: 58  TSGGSALTRLDATLVFEALSASCASVAAFLSIHNMCAKMIDDFGSDSMKTRLLPTVLSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                          +   LTE   G+D A++ ++      G Y LSG+K F+S    SD
Sbjct: 118 -------------TILSYCLTEPASGSDAASLKTKADVTEQG-YALSGNKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
           A+I++A+  G  G   +   + +    GL +  L++K+G RS  T +++  N       L
Sbjct: 164 AYIVMART-GVAGPKGISAFVVENGTEGLSFGGLEDKMGWRSQPTRQVQLVNCAISAENL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LGD++              L+ A  S+   + +L + +HY   R   G  L     ++  
Sbjct: 223 LGDIDQGFKYAMKGLDGGRLNIAACSIGAAQSALDKTVHYMAERQAFGQSLDQFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +D+ +A     + A   D           A +   + K  C +    V  + ++ 
Sbjct: 283 LADMEIDLQSARTFLRQAAWKLDTQVPD------ATVFCAMAKKLCTETGSRVADQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M +     L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVITARHL 376


>gi|308493279|ref|XP_003108829.1| hypothetical protein CRE_11989 [Caenorhabditis remanei]
 gi|308247386|gb|EFO91338.1| hypothetical protein CRE_11989 [Caenorhabditis remanei]
          Length = 411

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 121/379 (31%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P    + R++   G   SI    +        +      +        
Sbjct: 46  PNAAKHDKSGEFP--WEIARQAHKLGFMHSIIPEKYGGPGMNALNTCIIVEMLAYGCTGI 103

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + S V L  +    K +                +    +     +TE   G
Sbjct: 104 QAAIVGPSLAISPVLLSGSEEQKKKYL-------------GMLAAEPIIASYAVTEPGAG 150

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++  K  D         W      +  F +LA+ +              + DG
Sbjct: 151 SDVNGVKTKAVKKGDEYVINGSKAWITGGGHAKWFFVLARTDDDPKAPAGKAFTAFIVDG 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G+   + +  +G + + T  + F +         N+   P    K+ +         
Sbjct: 211 DTPGITRGKKEENMGQKCSDTRTITFEDVRVP---KENILGAPGAGFKVAMGAFDLTRPQ 267

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V      L E+  YA  R+  G  + +   ++  +AD+A+++  +   ++R A  
Sbjct: 268 VAAGAVGLAWRCLDESCKYALERNAFGTPIANHQAIQFMLADMAINLELSRLYTYRAAAE 327

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A    A A +  GG+G+  +  + +  R++  
Sbjct: 328 SDAGGVSS-------YNASIAKCFAADTANIAAANACQIFGGAGFNCDYPVEKLMRDAKI 380

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 381 YQIYEGTSQIQRIIIARTL 399


>gi|90416918|ref|ZP_01224847.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
 gi|90331265|gb|EAS46509.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2207]
          Length = 380

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 126/383 (32%), Gaps = 34/383 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P    +   G   D +           ++   G  C      +  V     +        
Sbjct: 28  PHHAQWEKDGMVSDDIWL---------KAGEQGFLCPTVPEEYGGVGVDFRYNCIVNEEI 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A          S  +   +    +    + + P+  S E             +   + 
Sbjct: 79  GHAGCTGLGWTLHSDIAVPYIVRYGSEEQKQRFLPRCVSGE-------------LITAIA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+    +      D  + L+G K F+++   S   I++A+     G   +  
Sbjct: 126 MTEPSAGSDLQGTKTTAVLDGDE-WVLNGSKTFITNGQKSGLVIVVAKTNVDAGSKGISL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IY 317
            L +    G    +   K+G ++  T EL F +        L     G +  M+ L    
Sbjct: 185 FLVEADTPGFTKGKNLEKLGLKAQDTSELFFQDVRIPKDNLLGEEGRGFIYLMQDLPQER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ +    +  +   I Y + R   G  +      +  +A+++ +++ A     R  
Sbjct: 245 LSVAVSANGMCQAVMQTTIDYVKERKAFGTNVASFQNTQFKLAELSAEVSCAEVYLDRCT 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E K  +  A+  +++          +   V  E ++  GG GY+ E  + R + ++
Sbjct: 305 ELLIEDKLDTVTASKLKLLT-------TDLQCKVADECLQLFGGWGYMWEYPVCRAFADA 357

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  GS   M L +   L K
Sbjct: 358 RVQRIYAGSNEIMKLIISRDLLK 380


>gi|2392308|pdb|1EGD|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392309|pdb|1EGD|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392310|pdb|1EGD|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2392311|pdb|1EGD|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase
 gi|2624510|pdb|1EGC|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624511|pdb|1EGC|B Chain B, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624512|pdb|1EGC|C Chain C, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
 gi|2624513|pdb|1EGC|D Chain D, Structure Of T255e, E376g Mutant Of Human Medium Chain
           Acyl- Coa Dehydrogenase Complexed With Octanoyl-Coa
          Length = 396

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 52  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 111

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 112 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 158

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 159 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 218

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 219 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRALDEAT 275

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 276 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 329 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAR 388


>gi|319652073|ref|ZP_08006193.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317396221|gb|EFV76939.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 381

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 127/378 (33%), Gaps = 33/378 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y    E  D++     W+ +       G  C   +  +          +           
Sbjct: 29  YDKWEE--DRIIPRDFWYKM----GEQGFLCPDIEEKYGGSSVDWGFSVVINEELERVGS 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +      +    T    + W PK  + E             +   + +TE  
Sbjct: 83  GMVGIGLHNDIVVPYITAYGTDEQKERWLPKCAAGE-------------IITAIAMTEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRV--GCFLVPRLLE 263
            G+D+A I +  +   D  Y ++G K F+++ +    I++A +           V  L  
Sbjct: 130 AGSDLAGIRTTARLEGDH-YIVNGEKTFITNGIHSDLIIIACKTNPNAVPRHKGVSLLAV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    R  NK+G     T EL F +       L+G+       + +      L  
Sbjct: 189 ERETKGFTRGRKLNKVGLHCQDTAELIFEDCKVPKENLIGEEGKGFLYLMEKLQQERLVV 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI +       L   ++Y + R   G  +      +  IA++A DI    +   +L    
Sbjct: 249 AIAAQVAAEEMLNLTMNYVKNREAFGRPVSQFQNTQFKIAEMATDIEMGRSFLDQLITEH 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K              + K+   + A  + AE M+  GG GY+EE  IAR YR+ P  
Sbjct: 309 MAGKD-------VVTKVSMAKWKLTENARNIAAECMQLHGGYGYMEEYEIARRYRDIPVA 361

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+   M   +   +
Sbjct: 362 SIYAGTNEIMKTIIAKNM 379


>gi|302557867|ref|ZP_07310209.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302475485|gb|EFL38578.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 385

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 136/394 (34%), Gaps = 34/394 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A     + N   P    +    ER D          + +R    G+   +    +  V 
Sbjct: 15  RALAAEFVDNEIVPHTRDWDR-AERVDP--------GIAKRLGDLGILGLMLPEQYGGVE 65

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 +               ++S S+   +  +A   T    + W P++ S E     
Sbjct: 66  ADMLSYVLVTEELGRGDSSVRGIVSVSLGLVSKTIASHGTDEQRESWLPRLASGE----- 120

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D  ++T++ ++  D      G  +  +  ++   +  A
Sbjct: 121 --------ALGCFALTEPGTGSDAGSLTTRAKRDGDDWIIDGGKMFITNGTVAAVALTFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNV 304
           +         V   L      G     +  K+G R  AT EL + +        LG+++ 
Sbjct: 173 RT----SEKGVTAFLVPTDTPGFTATEIHGKLGLRGQATAELTYESVRVPDSARLGEVDR 228

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             G          +  +  +V   + +L  A+ Y+  R   G  +    +++  +AD A+
Sbjct: 229 GLGIALGALSRGRISVSAGAVGLAQGALDAAVRYSTERAQFGRPIASFQLVQELLADSAV 288

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D+  A  L+  +A   D   S  E A      A   KY   + A  V    ++  GG G+
Sbjct: 289 DVQTARLLTHHVARMADAGASPKEYA----TDASAAKYHASETAVRVSNNCLQVFGGYGF 344

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I+E  + ++ R++   ++  G+     L +   L
Sbjct: 345 IDEYPVGKYLRDARVLTLYEGTSQVQKLIIGRAL 378


>gi|73955386|ref|XP_546581.2| PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain
           specific, mitochondrial precursor (VLCAD) isoform 1
           [Canis familiaris]
          Length = 650

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 165/417 (39%), Gaps = 59/417 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I S     
Sbjct: 184 ILLFGTKAQKEKYLPKLASGE-------------SIAAFCLTEPSSGSDAASIRSSAVPS 230

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 231 PCGKYYTLNGSKIWISNGGLADVFTVFAKTPVTDAATGAVKEKITAFVVERSFGGVTHGP 290

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F +         NV        K+ ++ L++    ++       
Sbjct: 291 PEKKMGIKASNTAEVYFDSVRVPA---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 347

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 348 RGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 405

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 406 ----FQIEAAISKIFGSEAAWKVTDECIQILGGMGFMKEPGVERVLRDLRIFRIFEGTND 461

Query: 449 AMVLDVL--NLLEKG------TNLFEQLFSTLEQDLGSSGKKVIT------------ILR 488
            + L V     ++KG       N  +  F      LG +GK++              I+ 
Sbjct: 462 ILRLFVALQGCMDKGKELSGLGNALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIIH 521

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             ++   E    A    E+ A    A  L +     + + F+  R  D+    + M+
Sbjct: 522 QELNRSGELTVQA---LEQFATVVEAK-LIKHKKGIVNEQFVLQRLADSAIDLYAMV 574


>gi|163736080|ref|ZP_02143499.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|161389950|gb|EDQ14300.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 383

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 83/418 (19%), Positives = 142/418 (33%), Gaps = 43/418 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
                S +  E ++L +       +E A       P+   +   G   D+        + 
Sbjct: 3   AEQHSSWMTDEHQMLADMTAQFITREWA-------PKFETWRKQGM-MDR--------ST 46

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
              +   GL C      +  V     H+         A L +      S   A  V    
Sbjct: 47  WNEAGALGLLCPSVPEEYGGVGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYVLSYG 106

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             +   L +TE   G+D+  I ++  K  +  Y
Sbjct: 107 TEEQKQRWLPKMITGE-------------LVGALAMTEPSTGSDVQRIKTKAVKDGNA-Y 152

Query: 227 CLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSN 284
            LSG K F+++      I + A+ +   G   +  + +E    +G    R  +KIG  + 
Sbjct: 153 RLSGQKTFITNGQHANLILVAAKTDPSQGSKGISLVAVETDGADGFSRGRNLDKIGLHAA 212

Query: 285 ATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
            T EL F N        L      G  + M+ L    L  A  +V  M  ++   I Y +
Sbjct: 213 DTSELFFDNVEIAPENILGGTEGQGFYQMMQQLPQERLIIACGAVGAMEGAVERTITYCK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG L      +  + +       A A         DE      +       A + 
Sbjct: 273 EREAFGGPLTQFQNTRFKLVECQTKTKVARAF-------LDECMVEHLQGKLTVEKAAMA 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           KYW       V+ E ++  GG G+++E ++A  + ++    I  G+   M   +   L
Sbjct: 326 KYWITDTQGDVLDECVQLHGGYGFMQEYAVAEMWTDARVQRIYGGTNEIMKELIARSL 383


>gi|226355420|ref|YP_002785160.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226317410|gb|ACO45406.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 380

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 140/382 (36%), Gaps = 31/382 (8%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L    P     +     P    L+R +   GL        +  V        R A    +
Sbjct: 21  LSRVEPRAHEIEDTNAVP--PELMREAAGLGLFGLSIPEEYGGVGLGA--LGRCAVYEAL 76

Query: 144 AQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            Q   G     S  ++   S +  +      + + P++ S E                G 
Sbjct: 77  GQGHMGFGGVISAHASIGTSGLVKLGNEEQKQRFLPRMASGEC-------------IAGF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D A I ++ +K  D         +  ++P++    ++A  +   G   +  
Sbjct: 124 AITEPSSGSDAANIRTRAEKRGDMYILNGTKHYISNAPIAGLLTVIAITDPAQGTRGMSA 183

Query: 261 LLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L +  +  GL   ++  K+G +   + E+ F +       LLG  ++       +    
Sbjct: 184 FLVEPQNTPGLSIGKVDEKMGQKGALSSEVIFQDAEVPAANLLGPEHLGYREALGILTNG 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  S   M+  L  ++ +A+ R   G  + +   ++  +A++ + I  +  L  ++
Sbjct: 244 RVGIAARSTGAMQRLLDLSVAHAKTREQFGQPIAEFQAVQFMLAEMEIAIQTSRLLWQKV 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+ +         R MA + KY   +    V  +A++  GG GY+++  + R+YR+
Sbjct: 304 AWMVDQKQD-------VRRMASVAKYHATEALSQVADKAVQVAGGMGYMKDSPVERYYRD 356

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+     L +   L
Sbjct: 357 QRLLRIYEGTSEIQKLIIARDL 378


>gi|313226306|emb|CBY21450.1| unnamed protein product [Oikopleura dioica]
          Length = 413

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 125/366 (34%), Gaps = 27/366 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              DK +  P     L+   + GL+       +                 L  +  A  +
Sbjct: 52  RDIDKNDDFPGLRDFLKTMGNMGLNGPGISEEYGAKDNP-IKSAAIIGEELSRKSAAISM 110

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              +  + ++  L    +      + P + S E                 L +TE   G+
Sbjct: 111 SYGAHNALNVRVLDANGSHEQKLKYLPDLISGE-------------KIGALSMTEPTAGS 157

Query: 210 DIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGS 266
           D+ ++ +          Y L+G+K W  + P+ D  I  A+ +        +   + D  
Sbjct: 158 DVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGDSITAFIVDTD 217

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIM 323
             G     +  K+G R + T +L F N                  +     +  L  A M
Sbjct: 218 AEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFVLMRGLNIERLLGAAM 277

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V  M+  + ++  YA  R   G  +    +M+  +A++   ++A  A ++ +  S D+ 
Sbjct: 278 PVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLSACRAYTYSMLKSADQ- 336

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +  A +         +       V  E ++ +GG+GY+ +  + R+ R++    I 
Sbjct: 337 ----DPEAMSNHECASLIMFVSDACTKVALEGIQILGGNGYVNDYPVNRYMRDAKLMEIG 392

Query: 444 LGSGNA 449
            G+   
Sbjct: 393 AGTTEV 398


>gi|148554682|ref|YP_001262264.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499872|gb|ABQ68126.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 380

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 69/350 (19%), Positives = 124/350 (35%), Gaps = 24/350 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+ C      +  +     +          A   AG  +   + +A  V    +    
Sbjct: 52  EAGMLCPNVSPDYGGLGLDFGYNAVIDEELAYAGSSAGVPLQNDI-TAEYVQSYGSEEQK 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E                 + +TE   G+D+ AI +  +++ D        
Sbjct: 111 RRYLPKMVSGEC-------------ISAIAMTEPATGSDLQAIRTTARRVGDRYVINGAK 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  I+ A+ +  +G   +  +L D    G    R  +KIG  S  T EL F
Sbjct: 158 TYVTNGQNADVVIVAAKTDPGLGARGLSLILVDADTPGFARGRNLDKIGLWSADTSELFF 217

Query: 292 SNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           ++    +   LG+       +        L  A  + +  + +  EA+ + + R   G  
Sbjct: 218 NDVEVPVANRLGEEGRGFAYLMSQLPQERLSIATSAQAAAQRAFDEALAFVKDRTAFGQP 277

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + +    K  +AD+   +    A         D A  R    A     A   K W   M 
Sbjct: 278 IFEFQNTKFTLADMKSQLQVGWA-------HLDWAIRRHIAGALTTAEASAAKQWHSDMQ 330

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   A++  GG+GY+ E  IAR +R++    I  G+   M   V   L
Sbjct: 331 GRITDMALQLHGGAGYMNEYLIARLWRDARVTRIFGGTNEIMKEVVSRSL 380


>gi|194377254|dbj|BAG63188.1| unnamed protein product [Homo sapiens]
          Length = 385

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 41  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G D+A I ++ +K  D  
Sbjct: 101 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGFDVAGIKTKAEKKGDEY 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 148 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 208 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 265 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 318 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 377


>gi|170089285|ref|XP_001875865.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649125|gb|EDR13367.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 594

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 124/509 (24%), Positives = 211/509 (41%), Gaps = 48/509 (9%)

Query: 27  QPPLFIGMNAYSSDSLLVALIAN-FPSVV----HKELELLGEYVLSCTAQELARMANYNT 81
           QP  F   N Y+SD +L  L+    P  V      +L  LG  +++ + + L      + 
Sbjct: 8   QPVPFQEENTYTSDPVLPDLLKRTLPPSVFQQIEPDLIRLGGEIIT-SIRSLGDGNKISP 66

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  Y   G R D ++    W  L   +  +G+    ++R F+   R        A++ 
Sbjct: 67  PILTQYDQWGRRVDNLQTSEGWRDLKAVAQKEGIPGIFYERKFKEHSR----VYGFAKMM 122

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +M           S+T  SA ++ L+ TP + K   P++ SR+            +   G
Sbjct: 123 MMVGDTHEVFCPLSMTDGSARVIELIGTPEMKKKILPRLISRDPSF---------AFTSG 173

Query: 200 LGLTEKRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
             +TE+ GG+D++   +              Y L+G KWF S+  S+  + LA+      
Sbjct: 174 QWMTERPGGSDVSRTETTAVDTGKSHSFGPKYSLNGFKWFSSATDSEVSVALARTGTAED 233

Query: 254 GCFLVPRLLEDGS---------------PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           G   +   L                    N +   RLKNKIG  +  T EL  ++T  +L
Sbjct: 234 GSRGLSLFLVPLRLPLLRERSDPPSSPVSNNIFVHRLKNKIGTHALPTAELTLTSTEAYL 293

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMK 356
           +G+ N     +  +  +  L SA  SV  +R  L+ A  YA+ R + G   +L D P+  
Sbjct: 294 MGEPNQGIKNITPVLNITRLWSAATSVGNLRKCLSIATAYAKVRSIKGGSQLLQDTPIHV 353

Query: 357 RAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             +A I L   A T L+F + +     +   + ++E    R++ P  K +  + A A + 
Sbjct: 354 AQLASINLLYRALTHLTFGVISLLGKSECGVATTDELRRLRMLTPAAKAFAAEKACAGME 413

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           EAM  +GG+GY+EE  I R  R++    I  G+   + LD+    +      E   S   
Sbjct: 414 EAMAALGGAGYMEENGIGRSIRDALVEKIWEGTVVVLALDLARSAQD-RESMESFTSWAN 472

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLAR 502
           + + S+   +  I++  + L K      R
Sbjct: 473 RVISSAASDLQEIIQRPLDLLKNALEELR 501


>gi|254255643|ref|ZP_04948959.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124901380|gb|EAY72130.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 596

 Score =  253 bits (646), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 96/507 (18%), Positives = 189/507 (37%), Gaps = 65/507 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF-- 99
           +L  L            E  G         E A+        L      G+R        
Sbjct: 13  VLKELADIDAVAQLPGFEDAGYDTAQAVLDESAKFC---GEVLAPLNVEGDRNPSSWKGG 69

Query: 100 ----HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
                P +    R+ +  G         ++     +   I    + ++        + P 
Sbjct: 70  VVSATPGFAHAFRQFVEGGWQGLQHPAEYDGQGLPK--LIATPCIEMLNASNLSFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  T    + + PK+ S E+  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLL 262
           + S+ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M  
Sbjct: 235 VNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  +     +  +A  +A+ R  S            +I  P ++R +  +   
Sbjct: 295 AARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              A AL++  A   D A   +++A  A   A      PI K W  +M   V +  ++  
Sbjct: 355 TEGARALAYVAAAHSDIAHRHADDATRAHHQAIYEYLVPIVKGWSTEMVNDVASLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG 477
           GG G+IEE   A++YR++   +I  G+       L     L     + + L + + + + 
Sbjct: 415 GGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDNGAVAKALIAQIGETVA 474

Query: 478 SSGKKVITILRDSISLCKEDKGLARFL 504
           + G+        + S+  + +  AR L
Sbjct: 475 ALGQLDGA---AAASMKAQLENGARSL 498


>gi|326328649|ref|ZP_08194989.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953610|gb|EGD45610.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 138/362 (38%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
                 +  +G         +         +  A     +A++ A +     + S   A 
Sbjct: 41  REFWLEAGENGFLGLAIPEEYGGAGADD-FRFNAVLAEELAKIGAAYPTCVGIHSDITAP 99

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  + T    + W P + S E             + + +G+TE  GG+D+AA+ +   +
Sbjct: 100 YLVRLGTEEQKQRWLPGVASGE-------------ILLAIGMTEPSGGSDLAALKTTAVR 146

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + ++G K F+++  S   ++ A + +   G   +     + +  G    R  +K+
Sbjct: 147 DGDE-WVINGSKTFITNGYSCDLVITAVRTDPEKGAKGITLFAIEATKEGFSRGRKLDKV 205

Query: 280 GNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   + T EL F N       ++G+LN     + +      +  A+ +++  +  L E +
Sbjct: 206 GMEESDTAELFFENVRVTDAEIIGELNRGFIHMMEELPQERVSCAVANIAQAKQILLETV 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +      K  +A++   I  A A   +   +    +    EA+ A+  
Sbjct: 266 QYAKDRKAFGQSIGAFQHNKFLLAELVTQIEVAEAYVDKCVAAHARGELTPVEASKAKW- 324

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 W  +    V+   ++  GG G++ E  +AR +R++    I  GS   M   +  
Sbjct: 325 ------WSSQAQSEVLDHCVQIHGGYGFMNEYRVARAWRDARVTKIWAGSNEIMKELIGR 378

Query: 457 LL 458
            L
Sbjct: 379 DL 380


>gi|330996007|ref|ZP_08319901.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329574004|gb|EGG55582.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 576

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 148/389 (38%), Gaps = 35/389 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V++       L   +  G++     R +  +          A +   A    G++ S  
Sbjct: 84  RVDYASGTVENLDAMVKAGMNGMTMPRKYNGLNFPITPYTMCAEVVAAADAGFGNIWS-L 142

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +        H  + P++ + E               + + LTE   G+D+ ++ 
Sbjct: 143 QDCIETLYEFGDEDQHSRFIPRVCAGE--------------TMSMDLTEPDAGSDLQSVM 188

Query: 216 SQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQ 273
            +      +  + L+G K F+++  +D  ++LA+ E G      +   + D    G+  +
Sbjct: 189 LKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRDGGVDVR 248

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSL 332
           R++NK+G   + T EL + N    L G   +     V  +     L  A  SV   + + 
Sbjct: 249 RIENKMGIHGSPTCELVYKNAKAELCGSRKLGLIKYVMALMNGARLGIAAQSVGLSQAAY 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------E 382
            EA+ YA+ R   G  +I+ P +   +A +   + A  AL ++ +   D          E
Sbjct: 309 NEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGRALLYQTSRYVDIYKALDDIACE 368

Query: 383 AKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            K   EE       A  A    P+ K    + A     + ++  GGSG++ E +  R YR
Sbjct: 369 RKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAYDGIQVHGGSGFMLEYACQRIYR 428

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           ++   SI  G+     +  +  +  G  +
Sbjct: 429 DARITSIYEGTTQLQTVAAIRYVTNGAYI 457


>gi|62896595|dbj|BAD96238.1| acyl-Coenzyme A dehydrogenase, very long chain precursor variant
           [Homo sapiens]
          Length = 655

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 353 RGIIAKAVDHATNRTQFGEKIHNFGLIQERLARMVMLQYVTESMAYMVSANMDQG----- 407

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 408 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|269126716|ref|YP_003300086.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311674|gb|ACY98048.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 409

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 74/392 (18%), Positives = 137/392 (34%), Gaps = 44/392 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLE 147
           P  E WD+ E  P    +++ +   GL+    D      +      I  A   L      
Sbjct: 34  PAAEEWDEREETP--WPIIQEASKIGLYSL--DFFANQWLEPTGLGIPVAFEELFWGDAG 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A+ VA   TP    +W P++F    D                  +E   
Sbjct: 90  IALSIVGTGLAAASVAATGTPEQVGEWVPQMFGTPDDI----------KLGAFCASEPDA 139

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+ +I ++       D         W  +  +++  +++A V   +G       +   
Sbjct: 140 GSDVGSIRTRAVYDEAKDEWVINGTKTWATNGGIANVHVVVASVYPELGSRGQASFIIPP 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---------- 315
              GL   +   K G R++ T E+   +      G L V      D +I           
Sbjct: 200 GTPGLRQGQKFKKHGIRASHTAEVILEDVRIP--GRLIVGGKEKFDERIARVREGKRARG 257

Query: 316 ---------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                           M+V   R +   A+ YA+ R   G  + D   +   +AD+   +
Sbjct: 258 QAALKTFETTRPSVGAMAVGVGRAAYEYALQYAQEREQFGRKIGDFQAIAFKLADMKTQL 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  + +R A    + K       +A     + K +  +M   V  EA++ +GG+GY  
Sbjct: 318 DAARLMVWRAAWMARQGK------EFANAEGSMAKLFASEMCVRVTEEAIQILGGNGYTR 371

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R +R+S   +I  G+     L +   +
Sbjct: 372 DYPVERMHRDSKIFTIFEGTSEIQRLVIGRAV 403


>gi|89070202|ref|ZP_01157530.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
 gi|89044218|gb|EAR50369.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
          Length = 563

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 90/496 (18%), Positives = 176/496 (35%), Gaps = 47/496 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK---VE 98
           LL  +I                  ++    E  R+ +     L   G       +   V 
Sbjct: 13  LLEHVIDFAGIAATDRFAEATPDTVAAILGEAGRLCDEVLAPLQRVGDIERARLENGVVR 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +    R     G      D     +            +   A L        S  +
Sbjct: 73  TPTGYGDGYRAVAEGGWIGIAADPEHGGMGLPLTLASGVNDMMAGACLSLQLGPLMSQGA 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              ++    P +   + P++ S E+  T             + LTE + G+D+ A+ ++ 
Sbjct: 133 IEALSHHAAPELQALYLPRLVSGEWCGT-------------MNLTEPQAGSDVGALRTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED--- 264
           +   DG Y ++G K +++   +D       ++LA++         +  FLVP+ L D   
Sbjct: 180 EPADDGTYRITGEKIYITWADNDFTENVCHLVLARLPDAAPGSKGISLFLVPKRLPDADG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G+ N L    L++K+G   + T  + +     +L+G  +     +  M     L   +
Sbjct: 240 RPGAANALRVVSLEHKLGLHGSPTAVMAYEGATSWLVGPPHGGLAAMFTMMNNARLGVGL 299

Query: 323 MSVSGMRVSLAEAIHYARRRHV----SGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             +     +L  A+ +A  R        G +I+   ++R +A +  +  AA A++   A 
Sbjct: 300 QGIGVAEAALQLALGHASERRQGRAGGEGTIIEHADVRRMLAQMKAETFAARAIALDCAR 359

Query: 379 SFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + D   +    E +A A ++ P+ K +       V +  ++  GG G+IEE   A++ R+
Sbjct: 360 AIDMETATGAPEWSARAALLTPVAKAFGTDTGFDVASTGVQVHGGMGFIEETGAAQYLRD 419

Query: 437 SPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ--------DLGSSGKKVITIL 487
               SI  G+     +D++   L  G      L   + +        +L +   +    L
Sbjct: 420 VRVTSIYEGTNGIQAMDLVGRKLADGGAAMLALIDEVAEAARGAELSELAAPVAQAAEAL 479

Query: 488 RDSISLCKEDKGLARF 503
           R +          ARF
Sbjct: 480 RGATEALVAAPPEARF 495


>gi|186475529|ref|YP_001856999.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191988|gb|ACC69953.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 596

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 92/479 (19%), Positives = 182/479 (37%), Gaps = 62/479 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WD 95
           ++  L            E  G        +E +++       L      G+R        
Sbjct: 13  VMQELAGLEDMAGLPGFEEAGLETAQAVLEESSKLCGE---VLAPLNVEGDRNPSTWKDG 69

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P +    R+    G         +E     +   I  A + ++        + P 
Sbjct: 70  KVTASPGFADAFRQFAAGGWQGVQHPAEYEGQGLPK--LIGTACIEMLNASNLAFALCPL 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ AL+T  +    + + P++ S  +  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALLTAGSEEQKQTYVPRLISGNWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +   DG Y + G K F++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRTRAEPQGDGSYRIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
                  G  N +    +++K+G +++ T  L+F +     G L+G+ N     +  M  
Sbjct: 235 VHADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRGLEYMFIMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALD 365
                  +  V+    +  +A  YA+ R  S            +I  P ++R ++ +   
Sbjct: 295 AARFAVGMQGVAISDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRMLSTMRAL 354

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECI 419
              + AL++  A   D A   +++A  A  +A      PI K W  +++  V +  ++  
Sbjct: 355 TEGSRALAYVAAAHSDIAHHHADQAKRAEHLAIYEYLVPIVKGWSTELSVDVTSLGVQVH 414

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
           GG G+IEE   A++YR++    I  G+       L     L  G  + + L + + Q +
Sbjct: 415 GGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGRKTLRDGGAVAKALLADIAQTV 473


>gi|107100735|ref|ZP_01364653.1| hypothetical protein PaerPA_01001762 [Pseudomonas aeruginosa PACS2]
          Length = 606

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 92/494 (18%), Positives = 173/494 (35%), Gaps = 61/494 (12%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A++       L H+    G   +  +V     +       +  G      
Sbjct: 37  DMVDAILGECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPKGYKEAYEAYVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKI 178
              +          + A +  +M        M P  S+ + + +    T    + +   +
Sbjct: 97  PVEYGGQGLP--MSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLVPL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS 
Sbjct: 155 TEGRWGGT-------------MCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSG 201

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G  NG+    L+ K+G +
Sbjct: 202 EHDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R
Sbjct: 262 ASATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARER 321

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRS 387
                             L+    ++R +           AL +     A+   +    +
Sbjct: 322 RSMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILSN 381

Query: 388 EEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           ++A Y R       + PI K    ++        M+  GG GYI E  + +  R++   +
Sbjct: 382 DDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIAT 441

Query: 442 ILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L    LL           + + +      K    +   ++ L K   
Sbjct: 442 LYEGTTGIQALDLLGRKVLLMTQGKAVRDFTTGVARFAVDLLKNEPRMRGRALVLLK-LC 500

Query: 499 GLARFLTEKIALAS 512
                LT +IAL +
Sbjct: 501 AQWNLLTLRIALTA 514


>gi|319653302|ref|ZP_08007404.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           2_A_57_CT2]
 gi|317395223|gb|EFV75959.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp.
           2_A_57_CT2]
          Length = 402

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 139/372 (37%), Gaps = 38/372 (10%)

Query: 92  ERWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           + WD+ V F P+   +L++     L        +        +   A     + + +  +
Sbjct: 30  QEWDRQVHFEPS---ILKKLAELQLMGVCIPEEYGGAGMD--YNTLAIICEELERGDTAY 84

Query: 151 LMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + SV +      +    T    + +               P  +       GLTE   
Sbjct: 85  RTAVSVHTGLNSMTLLQWGTEEQKQKYL-------------VPQAQGKQVGAFGLTEPNA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D++A+ S   +  D         W      +D F++ A+ E  +G   +   + +   
Sbjct: 132 GSDVSAMNSTAIRNGDSYILNGSKSWISLCDAADNFLIFAKTEHDIGHKGISAFIVERKF 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            G+  + +K K+G R+  T E+  S+    +    N      E  KI +  LD+   +V+
Sbjct: 192 PGVETKAIKGKLGIRAGNTGEVFLSDVRVPVS---NRLGEEGEGFKIAMSALDNGRFTVA 248

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V L EA     + Y   R   G  +    ++++ IA ++ ++  +  L F+     +
Sbjct: 249 AGAVGLIEASLEASLKYCHERKTFGKEIGRHQLVQQMIAKMSANLEISRLLVFKSGWLKN 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K  ++E + A+ +A       C  A     +A++  G  GY +E  + R  R S A  
Sbjct: 309 QGKRNTKETSLAKWIA-------CNAAFEAANDAVQIHGAYGYSDEYPVERFLRNSKAPV 361

Query: 442 ILLGSGNAMVLD 453
           I  G+     + 
Sbjct: 362 IYEGTREIHTIM 373


>gi|224370196|ref|YP_002604360.1| Acd10 [Desulfobacterium autotrophicum HRM2]
 gi|223692913|gb|ACN16196.1| Acd10 [Desulfobacterium autotrophicum HRM2]
          Length = 615

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 96/518 (18%), Positives = 184/518 (35%), Gaps = 68/518 (13%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGERWD- 95
             D +L         V H+      +  +     E   +A     P        G  +D 
Sbjct: 10  DIDFVLHE---QLGLVDHERFAEFNKKTVDLIVSEARNLAVKEILPTQKPGDEEGCTFDN 66

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V   P +                 D         +   + A    + A          
Sbjct: 67  GRVTVPPCFKRAWELYKEGEWLAMTDDPEVGGQGMPKLVGLAANEYLIGANPSFMLYSGM 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A++V    T    + +  K+FS E+  T             + LTE   G+D+ A+
Sbjct: 127 THGAATLVEAFGTDEQKRLYMKKMFSGEWGGT-------------MLLTEAEAGSDVGAL 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           +S  +K +DG Y ++G K F+S+   D        +LA++EG       +  FLVP+   
Sbjct: 174 SSVAKKNADGTYSITGTKIFISAGEHDLAKNIIHPVLARIEGAPEGTRGISLFLVPKYRV 233

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    ++ K+G   NAT  L       + G LLG  N     +  M   
Sbjct: 234 NDDGSLGEFNNVVCTGIEEKMGLHGNATCTLSLGEKGESIGTLLGAENKGMSAMFRMMNE 293

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADI 362
                 +   +    S   A+ YAR R   G               +I+ P ++R + ++
Sbjct: 294 ARAFVGLQGFAVSTASYMYALDYARTRIQ-GKNILKARQPGVKSCPIIEHPDVRRQLLNM 352

Query: 363 ALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              I    +L +       +A + ++ + +        ++ P+ K +    +  V +  +
Sbjct: 353 KALIEGMRSLIYFNGKCLDIAETSEDPEQKERYGDMVELLTPLVKGYVTDRSLEVCSHGV 412

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474
           +  GG GYI+E  + +  R+S    I  G+     +D+L   L  K   LF      + Q
Sbjct: 413 QVYGGYGYIKEFPVEQLMRDSRIYMIYEGTNGIQAMDLLGRKLAMKDGKLFRDFIDEIRQ 472

Query: 475 DLGSS-----GKKVITILRDSISLCKEDKGLARFLTEK 507
            + ++      K +   +  ++   ++    A+ + E+
Sbjct: 473 VVEAAKQVEGVKAIAARVEKAVDKLEQT---AKVIGER 507


>gi|7542837|gb|AAF63626.1| medium-chain acyl-CoA dehydrogenase [Homo sapiens]
          Length = 425

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 81  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 140

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 141 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 187

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 188 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 247

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A  +V   + +L EA 
Sbjct: 248 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT 304

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 305 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 357

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 358 ASTAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 417


>gi|301059403|ref|ZP_07200325.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
 gi|300446484|gb|EFK10327.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
          Length = 594

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 85/472 (18%), Positives = 164/472 (34%), Gaps = 42/472 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL ++   GL  +     +  +   +      A              + +      +   
Sbjct: 65  LLAKAGELGLLGTEIPEEYGGLELDKVSTTVVAEALGGGGSITAVYGAHTGIGTLPIVYF 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + + PK+ S E+                  LTE   G+D     ++     DG 
Sbjct: 125 GNEGQKQKYLPKLASGEWC-------------AAYCLTEPGAGSDALNAKTKAVLSEDGT 171

Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y ++G K F+++   +  F++ A+V G          + +    G+   + + K+G   
Sbjct: 172 KYIINGEKIFITNAGWASTFVVYAKVNGED----FTGFIVEKDFKGVSTGKEEKKMGMHG 227

Query: 284 NATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T  + F +    +   L           ++  L        +V G +  + EA+ YA 
Sbjct: 228 SSTRPVIFEDAEVPVENVLYEIGKGHKIAFNILNLGRWKLGAFTVGGCKGCITEAVKYAN 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEAAY 392
            R      +    ++K  +AD+A+    + ++ +RLA  FD        EAK    E A 
Sbjct: 288 GRIQFKVPISSFGLIKTKLADMAVKTFMSDSMMYRLAGMFDGKLETLPAEAKKSGTENAK 347

Query: 393 ARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A         ITK +  +     + E ++ +GG G+  E    R+YR+S  N I  G+  
Sbjct: 348 AIEEYAAECSITKVYGSEALDFCVDEYVQILGGYGFCAEYPAERYYRDSRINRIWEGTNE 407

Query: 449 AMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                +   L     KG     Q    +  +L       + +    ++L +    + + L
Sbjct: 408 INRTLIPGTLMQRAMKGRLNLLQAAQAIPGELMGYSPLSVQLPDTPLALQEHMIKMMKKL 467

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
              + +A  AA  ++  +    +V    +  D       M  G      IID
Sbjct: 468 A--LMIAGGAAMKFQQKLAKEQEVL--GKLADIIIEIFAMESGLLRTLKIID 515


>gi|295691104|ref|YP_003594797.1| butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756]
 gi|295433007|gb|ADG12179.1| Butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756]
          Length = 382

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 119/360 (33%), Gaps = 31/360 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +    +   + A  L   +        +     +  + +      
Sbjct: 46  ALGLFGLSIPEEYGGLGLGMEDEALVAIELGRASPAFRSVFGTNVGIGSQGLVMFGDDAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W P + S E             V     LTE   G+D  A+ ++     D       
Sbjct: 106 KAKWLPGVASGE-------------VITSFALTEPEAGSDSGAVQTRATLDGDAYVLNGS 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++  +  F ++A+      G   V   L      GL   + + K+G +     ++
Sbjct: 153 KRYITNAGKASLFTVMARTNPDVKGGGGVSAFLVPRDLPGLSVSKPEKKMGQQGAHIHDV 212

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F N    +    N      E  K+ +       L  A + V      +A+ + YA  R 
Sbjct: 213 TFDNVRVPV---ENRLGAEGEGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYASERK 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +  +++  IAD   +  AA AL    A   D     + EAA        +K +
Sbjct: 270 QFGQPIANFQLIQAMIADSKTEALAARALVLETARKRDAGVGVTLEAA-------ASKLF 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +M   V   A++  GG+GY+ +  I R YR+     I  G+     L V     K   
Sbjct: 323 ASEMVGKVADRAVQIFGGAGYVADYGIERLYRDVRIFRIYEGTTQIQQLIVARETLKQGG 382


>gi|148260554|ref|YP_001234681.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146402235|gb|ABQ30762.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 386

 Score =  252 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 135/352 (38%), Gaps = 20/352 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL           +    A +           L    ++  +V   S  + +  T   
Sbjct: 46  ELGLFGLSIPEEHGGIGLSMAQECEVVHRLGQTSLAFRSVIGSNVGIGSQGILMDGTAAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             ++ P++ S E             + +   LTE   G+D A++T++ ++  +       
Sbjct: 106 KAEYLPRVASGE-------------LIMSFALTEPDAGSDAASLTTRAERDGEDYILNGA 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P +  F ++A+  G  G   +   +      GL   R   K+G R   T ++ 
Sbjct: 153 KRYITNAPRAGGFTLMART-GGPGASGISAFIVPADTPGLKLGRPDRKMGQRGTKTCDVI 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L  + ++    R    EAI YAR R   G
Sbjct: 212 LENARVPAANIIGGVPGQGFRTAMKVLDRGRLHISAVACGMARRLQDEAIAYARERRQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   +++A  AL   +A ++D+ ++     A   + A   K +C +
Sbjct: 272 RPIGEFQLVQAMLADSEAELSAGWALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           M   V   A++  GG+GY+ E  + R YR+     +  G+     + +   L
Sbjct: 331 MVGRVADRAVQVHGGAGYMAEYKVERFYRDVRLLRLYEGTTQIQQMIIGRAL 382


>gi|326387565|ref|ZP_08209171.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207611|gb|EGD58422.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 596

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 91/546 (16%), Positives = 193/546 (35%), Gaps = 81/546 (14%)

Query: 57  ELELLGE---YVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALL 107
           +L    E    +      E A++       L      G+          V     +    
Sbjct: 26  DLSAFAEITPELAEAVLTEAAKLCEN---VLLPLNRSGDEEGCHFENGVVRTPAGFKDAF 82

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R+ +  G +  +    +      +A       +     +        +  + + +    +
Sbjct: 83  RQFVEGGWNALVLPAKWGGQGLPEALGKLVEEMICATNVSFSLYPGLTNGAIAAIDAYAS 142

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             + + + PK+   E+  T             + LTE   GTD+  + ++ +   DG Y 
Sbjct: 143 DTLKETYLPKMVGGEWSGT-------------MCLTEPHCGTDLGLLRTRAEPAGDGSYK 189

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLC 271
           +SG K F+S+   D       ++LA++         +  FLVP+ L D +      NG  
Sbjct: 190 VSGAKIFISAGEQDLTDNIVHLVLARLPDAPRGVKGISLFLVPKFLPDAAGAWSVRNGAH 249

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +++K+G +++AT ++ F    G+L+G+ +     +  M     +   I  +     +
Sbjct: 250 CTMIEHKMGIKASATCQMLFEEATGWLVGEPHRGLEAMFTMMNAERVGVGIQGLGIGEAA 309

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ YA+ R                  +I  P ++R +  I         ++  ++ +
Sbjct: 310 YQSAVWYAKERVQGRSLSGTKHPDKPADPIIVHPDVRRMLLTIRAWNEGCRGIAGWISRA 369

Query: 380 FDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            D  K       R   A    +M P+ K     +     + A++C GG G+I E  + ++
Sbjct: 370 LDAEKHGETPEVRQRAADLVALMTPVVKALFTDLGLESASLAVQCYGGHGFIRESGVEQY 429

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG------TNLFEQLFSTLEQDLGS-SGKKVITI 486
            R++    +  G+     LD++             + F  + + +E++ G  +    +T 
Sbjct: 430 MRDARIAMLYEGTNGIQALDLVGRKMPAEMGRYLRSFFHPVSAFIEENGGEGAMAPFVTG 489

Query: 487 LRDSISLCKEDKGLARFLTEK------IALASSAAALYRAGMNDIADVFLEN------RF 534
           L+ +       +G    + E+       A A+SA  L   G+  +A  F ++      R 
Sbjct: 490 LKRAFEAL---QGATAMIAERGMKDPEEAGAASADYLRLLGLVAMAYTFAKSVRIAQARL 546

Query: 535 LDNCHS 540
                 
Sbjct: 547 AGGEGD 552


>gi|71005060|ref|XP_757196.1| hypothetical protein UM01049.1 [Ustilago maydis 521]
 gi|46096558|gb|EAK81791.1| hypothetical protein UM01049.1 [Ustilago maydis 521]
          Length = 424

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 140/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P    +L++    GL  +     +             +          
Sbjct: 67  PNARHHDQTMEYPT--EILKKGWEVGLLNTHIPEEYGGPGLGLMECALISEELAFGCSGI 124

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M  +  + + + +  +  + + +  ++              +  +     +TE   G
Sbjct: 125 QTAMEANGLAEAPLLVSASHEIKQKYLGRMT-------------EEPLMAAYCVTEPGAG 171

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP 267
           +D+A I ++ +K  D         W  +   ++ + +LA+ +        +   + D   
Sbjct: 172 SDVANIATKAEKQGDKWVINGSKMWITNGGKANWYFVLAKTDPSAKAAKSMTGFVVDADT 231

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G+   + +  +G R + T ++ F N    ++ + N+   P +  K  +          A
Sbjct: 232 PGIIVGKKEINMGQRCSDTRQITFENV---VVPEENILGKPGDGFKTAMGAFDITRPLVA 288

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L EA  YA+ R   G  +ID   +   +AD+ +++ AA  L ++ + + D
Sbjct: 289 AGAVGLAQRALHEAAIYAQDRKTMGKAIIDHQAIAFLLADMQMNVEAARNLVWKASWAKD 348

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  S  A+ A+  A     +    A       ++  GG G+  E  + + YR++    
Sbjct: 349 QGQRNSFWASMAKCRAGEAANFNADAA-------VQIFGGLGFNTESPVEKLYRDARIFR 401

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           +  G+     L +   +++
Sbjct: 402 LYEGTDQIQRLIISRHIKE 420


>gi|313219763|emb|CBY30681.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 128/373 (34%), Gaps = 26/373 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGH 150
              D+ +  P +     +    G+  ++    F           +    L  ++      
Sbjct: 57  REIDETDSFPEYREFWLKCGEQGVLGTLSAEEFGGTGMGLFETSLMLEELSRISGGVYMG 116

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +  S+ ++    T      + P + S                   L ++E   G+D
Sbjct: 117 IFAHTCLSSYVIERNGTAEQKAKFLPGLVSG-------------QTIGALAMSEPGSGSD 163

Query: 211 IAAITSQGQKI-SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED-GS 266
           + ++  Q  K      Y ++G K W  + P+ D  ++ A+ +    G   +     D   
Sbjct: 164 VMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSKSITAFAIDVRE 223

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G     +  K+G R + T EL F N       +LG        +     +  L  A  
Sbjct: 224 LEGFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGVEGKGAAVLMKGLNVERLTGAAG 283

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++A  A  + L  + D+ 
Sbjct: 284 AVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLSATRAYLYALLKAADK- 342

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++             +  + A  V  EA++ +GG+GY       R  R+     I 
Sbjct: 343 ----DQKTLTNHDCAAVLMYGAEQATKVSLEAIQILGGNGYTNAYPAERIMRDCKIGEIG 398

Query: 444 LGSGNAMVLDVLN 456
            G+     L +  
Sbjct: 399 AGTTEVRKLILGR 411


>gi|53721653|ref|YP_110638.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76817780|ref|YP_337329.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126457593|ref|YP_001074862.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134279074|ref|ZP_01765787.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167848803|ref|ZP_02474311.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|242314082|ref|ZP_04813099.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254263831|ref|ZP_04954696.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254299885|ref|ZP_04967333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52212067|emb|CAH38074.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76582253|gb|ABA51727.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126231361|gb|ABN94774.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134249493|gb|EBA49574.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157809787|gb|EDO86957.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|242137321|gb|EES23724.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254214833|gb|EET04218.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 377

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|321470919|gb|EFX81893.1| hypothetical protein DAPPUDRAFT_302851 [Daphnia pulex]
          Length = 644

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 154/403 (38%), Gaps = 41/403 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L      GL        +  +        R A +  +    A  L +        + 
Sbjct: 118 KETLDGLKALGLFGQQIPTEYGGLGFNATEFARIAEITAIDSSVAVTLAAHQSIGLKGLL 177

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +         + P++ + E+                  LTE   G+D A++ ++     D
Sbjct: 178 IAGNEEQKAKYLPRLATGEW-------------VAAFCLTEPGSGSDAASVQTKAVLSDD 224

Query: 224 G-IYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCF--LVPRLLEDGSPNGLCYQRLKN 277
           G  + ++G+K ++S+  ++D F + A+    G+ G     V   L + +  G+ + + ++
Sbjct: 225 GNHWIMNGNKIWISNGGIADFFTVFAKTSVRGKTGEMEDRVTAFLVERNFGGVTHGKPED 284

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSL---- 332
           K+G R + T ++ F N     +   NV        KI +  L+S   S+      +    
Sbjct: 285 KLGIRGSNTCQVFFENVP---IPKENVLGEVGAGFKIALNILNSGRFSMGSSGAGMLKKL 341

Query: 333 -AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389
              +  +A  R   G  L++  +++   A +A+ I A  ++++  +   D  E    + E
Sbjct: 342 VGWSAEHAINRKQFGKPLMEFELIQEKFAKMAVTIYAMESMAYLTSGMLDTYEEPDCAME 401

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA  ++ +    + C        +E ++ +GG GY+++    R  R++    I  G+   
Sbjct: 402 AAMVKVFSSEAVWNCT-------SECLQILGGLGYMKDYPYERFLRDARILLIFEGTNEI 454

Query: 450 M-VLDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILR 488
           + +L  L  L+       ++   +     + G + KK+    R
Sbjct: 455 LRILISLLGLQHAGKSLSEMVRKVRNPTANPGFAVKKMWERFR 497


>gi|326568038|gb|EGE18128.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC7]
          Length = 606

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 83/487 (17%), Positives = 173/487 (35%), Gaps = 58/487 (11%)

Query: 69  TAQELARMANYNTPQL-HAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             +  A  A      L       G   +  +V     +    ++ +  G     +   F 
Sbjct: 42  ILEGFADFAENILAPLYQPADAEGCTFKDGEVTTPTGFKEAYQQFVEGGWQAISYPEKFG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  + +   A          +  S + +           + PK+ S E+  
Sbjct: 102 GMNLPMSLNLIKSEMMGTANWPWAMYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + ++    +DG Y ++G K F+S+   D    
Sbjct: 162 T-------------MCLTEAQCGTDLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTEN 208

Query: 242 -AFIMLAQV------EGRVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+ L +        N +    +++K+G  S+AT  +
Sbjct: 209 IVHIVLARLPDAPAGTKGISLFIVPKFLPNADGEADKRNAVACGSIEHKMGITSSATCVI 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------ 343
            F    GFL+G+ N     +        + + I  ++ + +S   ++ YA+ R       
Sbjct: 269 NFDGATGFLIGEANKGLKAMFTYMNTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALS 328

Query: 344 ------VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYAR 394
                      +I    ++R +         A ++ +  A   D   EA ++ +E A  +
Sbjct: 329 GVKEPNQPADAIIHHADVRRMLLTQKAFAEGARSMIYHTARYADKLAEAVAKGDETAIKK 388

Query: 395 I------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  ++         +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKMGVFTPILKGFLTELGIEAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTG 448

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
              LD+L    LL  G        + + +  G     +   +R  + +  +       LT
Sbjct: 449 VQALDLLGRKVLLHGGGKAIRDYTAGIMKWCGEY--ALDKEMRKYVWVLTKLCAEWNMLT 506

Query: 506 EKIALAS 512
            ++ L +
Sbjct: 507 ARLLLTA 513


>gi|323358382|ref|YP_004224778.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323274753|dbj|BAJ74898.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 389

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 79/372 (21%), Positives = 133/372 (35%), Gaps = 27/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  +  P    +LRR+   GL               +   +             
Sbjct: 36  PHALEWDAEKHFP--RDVLRRAGELGLGGVYVRDDVGGAGLSRRDAVAIFEELAYGDPTV 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     A M+    T    + W P + +                     LTE   G
Sbjct: 94  TAYITIHNMVAWMIDAYGTSVQRERWLPGLVAM-------------DDLGAYCLTEPGAG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AAIT+   +  D  Y L+G K F+S    +  ++++A+  G  G   +   L     
Sbjct: 141 SDAAAITTSAIRHGD-TYVLTGVKQFISGAGEASVYVVMART-GEPGARGISAFLVPADA 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L+ K+G  +  T ++           LLG                 L+ A  S
Sbjct: 199 EGLSFGPLEKKMGWNAQPTRQVILDEVRVPAENLLGGEGRGFSIAMTALNGGRLNIATCS 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G R +L  AI Y   R   G  L ++  +  A+AD+A ++ AA  L    A + D   
Sbjct: 259 IGGARWALDRAIAYVHERFTFGEALAEKQSVVFAVADMATELEAARLLVREAATALDAKD 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +           + K +   +   V  EA++  GG GY+++  I +  R+   + IL 
Sbjct: 319 PDTA------TRCAMAKRFATDVGFRVANEALQLHGGYGYLQDYGIEKVVRDLRVHQILE 372

Query: 445 GSGNAMVLDVLN 456
           G+   M L +  
Sbjct: 373 GTNEIMRLIIGR 384


>gi|258591982|emb|CBE68287.1| Acyl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 596

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 78/450 (17%), Positives = 154/450 (34%), Gaps = 52/450 (11%)

Query: 87  YGPGGERWDKVEFHPAWH---ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
             P  ER +    H  W     L+R++   GL       ++  +          A     
Sbjct: 49  ITPQAERIE----HQDWDVTLTLMRKAGELGLLSVDIPTTYGGLGLDLITSTVIAEQMSE 104

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A  L+  S   +  +A          + P + +              +      LT
Sbjct: 105 GGSFAISLLDHSGIGSLPIAWFGNAEQKARYLPLLATG-------------AKVGSYALT 151

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261
           E   G+D  +  ++     DG  Y L+G K F+++   +D +I  A+V G          
Sbjct: 152 EPGSGSDALSAKTRAVLSPDGTAYILNGTKQFITNAAFADLYITYAKVNGDK----FTAF 207

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYL 318
           + D    G+     + K+G +  +T  +   N          ++        D+  +  L
Sbjct: 208 IIDKDTPGVALGPEEKKMGIKGTSTRSVILENARVPADNLLYEIGRGHKVAFDLLNIGRL 267

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                 +   +++L EA+ YA++R   G  +    ++++ +A++ +    A ++ +R A 
Sbjct: 268 KLGAGCLGLCKLALREAVRYAKQRTQFGQPIASFGLIQKKLAEMTIRTYVAESMIYRTAG 327

Query: 379 SFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +                 ++      +   I K +  +    V  E ++  GG GYI 
Sbjct: 328 LIERNLSGIDQESERAGLDTAKGVEEYAVECSINKVYASEALDYVADETVQIFGGYGYIA 387

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           +    R YR++  N +  G+     L +             LF    Q           +
Sbjct: 388 DFPAERIYRDARINRLFEGTNEINRLLIPT----------TLFRRALQGRLPLFTAAQKL 437

Query: 487 LRDSISL-CKEDKGLARFLTEKIALASSAA 515
           + D +S    +++G    L E+I L  SA 
Sbjct: 438 VTDLLSYSSSQEEGYGDPLHEQIRLLESAK 467


>gi|285018539|ref|YP_003376250.1| acyl-CoA dehydrogenase oxidoreductase [Xanthomonas albilineans GPE
           PC73]
 gi|283473757|emb|CBA16260.1| putative acyl-coa dehydrogenase oxidoreductase protein [Xanthomonas
           albilineans]
          Length = 382

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 142/397 (35%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQERIAPSAEHHDRTGE-------FPL--ENIRLLGENGLMGIEVPEQYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A+ +    +       +  +   +      +         + +   I   E    
Sbjct: 63  GMDPIAYVLAMIEIAAGDAAHSTIMSVNNSLFCGGILKNGDEAQKQKYVRAIAQGEQ--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D  A+  +     DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDATAMRCRAVPRDDGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF +   +      V 
Sbjct: 170 FAMSEPERGARGITAFVIDTDKPGFHRGKTEPKLGIRASATCEIEFQD---YHATADEVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
             P E  KI +  LD+  + ++   + LA A +     Y + R   G  +    + +  +
Sbjct: 227 GTPGEGFKIAMSVLDAGRIGIASQAIGLARAAYQATLGYVKERKAFGSPIGAFQMTQAKV 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + +  + E       A + K    + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWLKGQGQQFTTE-------ASVAKLTASEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|148872486|sp|P41367|ACADM_PIG RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|56791886|gb|AAW30430.1| medium-chain acyl-coA dehydrogenase [Sus scrofa]
          Length = 421

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 136/400 (34%), Gaps = 47/400 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            TA++ AR      P    Y   GE       +P    LL+R+   GL  +    SF  +
Sbjct: 50  ATARKFAR--EEIIPVAAEYDRTGE-------YPV--PLLKRAWELGLMNTHIPESFGGL 98

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                             +    L++  +                   P I    Y    
Sbjct: 99  GLG---------------IIDSCLITEELAYGCTGVQTAIEANTLGQVPLIIGGNYQQQK 143

Query: 188 K--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           K    M +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +
Sbjct: 144 KYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFL 203

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+ +              + +    G+   R +  +G R + T  + F +         
Sbjct: 204 LARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVP---KE 260

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV TG     KI +          A  +V   + +L EA  YA  R   G +L +   + 
Sbjct: 261 NVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGIS 320

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  A     R A   D  +  +         A I K +   +A  +  +A+
Sbjct: 321 FLLADMAMKVELARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAV 373

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 374 QVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAR 413


>gi|262371616|ref|ZP_06064895.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311641|gb|EEY92726.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 387

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 84/399 (21%), Positives = 146/399 (36%), Gaps = 29/399 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +      A      T       P    WD+ E  P    L +++   GL    +D ++  
Sbjct: 9   TEQHLAFAESVRRFTE--KEISPFINEWDEAETFP--RELYKKAADIGLLGVGFDENYGG 64

Query: 127 VVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    A     A + L   A       +         +       V  +  PKI S E  
Sbjct: 65  IAGTDAFYTLLASVELAKCASGGLAASLLSHTIGTPPIQHFAQEEVKAEVLPKILSGE-- 122

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAF 243
                          L +TE  GG+D+AA+ ++  +  D  Y ++G K F++S + +D +
Sbjct: 123 -----------KISALAITEPSGGSDVAALKTKAVRDGDD-YIVNGEKTFITSGIRADYY 170

Query: 244 IMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            +  + +    G   +  LL D    G+   +L +K+G  ++ T  L F N       LL
Sbjct: 171 SVAVRTDPDAKGANGISMLLIDAHSEGITKSKL-DKMGWWASDTAHLHFDNVRVPAKNLL 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G  N+    + +   +     A  S     V   EA+ +A++R   G  LID  V++  +
Sbjct: 230 GAENMGFFVIMNNFNMERFFLAASSYGYALVCYEEALDWAQQRQTFGKRLIDHQVVRHKL 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D+A  + +  AL    A    + + +  E         + K    +        A++ +
Sbjct: 290 VDMATRLTSTRALLEDTAYRLGKPELQGNE---LIAQICMLKNVATQTMQFCADAAVQTL 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG G++      R YRE   N I  G+   M       L
Sbjct: 347 GGMGFMRGTKSERIYREVKVNMIGGGAEEIMKDLASRQL 385


>gi|123983052|gb|ABM83267.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
           [synthetic construct]
          Length = 421

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     K+ +          A   V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGVVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 413


>gi|254784718|ref|YP_003072146.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae
           T7901]
 gi|237684433|gb|ACR11697.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae
           T7901]
          Length = 591

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 87/509 (17%), Positives = 172/509 (33%), Gaps = 63/509 (12%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V   L   G+      A   +R A+    QL            V     +    +     
Sbjct: 39  VEAILSECGKIAGDAIA-PCSREADEQGCQLQE--------GNVAVPQGFADAYQLLCDG 89

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G      +  +  +   ++       +   A +  G L   +  +   +    +  +   
Sbjct: 90  GWCSLSGNPEYGGMGLPKSLVAAVDEMVQGACMSFGLLPMLTAGACLAIDAHGSDALKST 149

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  K++S  +             +  + LTE   GTD+  I ++ + ++D  Y ++G K 
Sbjct: 150 YLEKMYSGAW-------------SGAMDLTEPHAGTDLGLIRTRAEPLADDSYAVTGTKI 196

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277
           F++            ++LA++         +  FLVP+ + D     G  N      L+ 
Sbjct: 197 FITWGEHQLAENIIHLVLAKLPDAPAGSRGISMFLVPKYIPDAQGEPGERNRFSCGGLEK 256

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G +++ T  + F    G+L+G+ +     +  M     L   I  V     S   A+ 
Sbjct: 257 KMGIKASPTCVMNFDGARGWLVGEPHKGLQAMFTMMNYERLVVGIQGVGAAEASYQNAVS 316

Query: 338 YARRRHVSGGILID------------QPVMKRAIADIALDIAAATAL------SFRLANS 379
           YAR R      +               P ++R +  +     A  A          +A  
Sbjct: 317 YARERLQGRSPVGAHSPEKEADNLLVHPDVRRMLLTMRALNEAGRAFYIYVSQWLDIAKF 376

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ + +++  A   ++ P+ K +    A  V     +  GG G+I E    +  R++  
Sbjct: 377 SDDQQRKTQAEALVALLTPVAKGFMTDRAFEVAVLGQQVYGGHGFIREWGQEQLVRDTRI 436

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497
             I  G+     +D++    K      QL      D+ +  +G      L   I+  ++ 
Sbjct: 437 TQIYEGTNGVQAMDLVG--RKTVATHGQLLDVFVGDVDAFVAGLANKRELSSLITPLQQA 494

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIA 526
             L +  T  I      +A  R     +A
Sbjct: 495 IVLLQTTTHSIV---QQSADNRFLPGAVA 520


>gi|296112458|ref|YP_003626396.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4]
 gi|295920152|gb|ADG60503.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4]
 gi|326561590|gb|EGE11929.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 7169]
 gi|326562046|gb|EGE12375.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           46P47B1]
 gi|326565329|gb|EGE15508.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           103P14B1]
 gi|326570570|gb|EGE20608.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC1]
 gi|326570729|gb|EGE20755.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC8]
 gi|326573566|gb|EGE23528.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis CO72]
 gi|326577351|gb|EGE27237.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           101P30B1]
 gi|326577837|gb|EGE27704.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis O35E]
          Length = 606

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 83/487 (17%), Positives = 173/487 (35%), Gaps = 58/487 (11%)

Query: 69  TAQELARMANYNTPQL-HAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             +  A  A      L       G   +  +V     +    ++ +  G     +   F 
Sbjct: 42  ILEGFADFAENILAPLYQPADAEGCTFKDGEVTTPTGFKEAYQQFVEGGWQAISYPEKFG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  + +   A          +  S + +           + PK+ S E+  
Sbjct: 102 GMNLPMSLNLIKSEMMGTANWPWAMYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + ++    +DG Y ++G K F+S+   D    
Sbjct: 162 T-------------MCLTEAQCGTDLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTEN 208

Query: 242 -AFIMLAQV------EGRVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+ L +        N +    +++K+G  S+AT  +
Sbjct: 209 IVHIVLARLPDAPAGTKGISLFIVPKFLPNADGEADKRNAVACGSIEHKMGITSSATCVI 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------ 343
            F    GFL+G+ N     +        + + I  ++ + +S   ++ YA+ R       
Sbjct: 269 NFDGATGFLIGEANKGLKAMFTYMNTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALS 328

Query: 344 ------VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYAR 394
                      +I    ++R +         A ++ +  A   D   EA ++ +E A  +
Sbjct: 329 GVKEPNQPADAIIHHADVRRMLLTQKAFAEGARSMIYHTARYADKLAEAVAKGDETAIKK 388

Query: 395 I------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  ++         +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKMGFFTPILKGFLTELGIEAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTG 448

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
              LD+L    LL  G        + + +  G     +   +R  + +  +       LT
Sbjct: 449 VQALDLLGRKVLLHGGGKAIRDYTAGIMKWCGEY--ALDKEMRKYVWVLTKLCAEWNMLT 506

Query: 506 EKIALAS 512
            ++ L +
Sbjct: 507 ARLLLTA 513


>gi|156379349|ref|XP_001631420.1| predicted protein [Nematostella vectensis]
 gi|156218460|gb|EDO39357.1| predicted protein [Nematostella vectensis]
          Length = 580

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 70/414 (16%), Positives = 155/414 (37%), Gaps = 51/414 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           + L       + + P++ +                     LTE   G+D A+I ++ +  
Sbjct: 115 ILLFGNKEQKEKYLPQVATG-------------KKYAAFCLTEPSSGSDAASIKTRAELS 161

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQR 274
           K         G  W  +  ++D F + A+    + + G     V   + +    G+    
Sbjct: 162 KDGKHWILNGGKLWISNGGIADIFTVFAKTPIKDPKTGEVKDKVTAFIVERGFGGVESGP 221

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F N    +    NV  G     K+ +  L++    ++G      
Sbjct: 222 PEKKMGIKASNTAEVYFDNVPVPV---ENVLGGEGNGFKVAMNILNNGRFGMAGALSGTM 278

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A+ +A  R   G  +     ++  IA +A+      ++++ ++ + D       
Sbjct: 279 KGLIEKAVDFAANRTQFGAKIETFGAIQEKIARMAMLHYVTESMAYMISANMDSG----- 333

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   ++ A I+K +  + A  V  E ++ +GG+G+++   + R  R+     I  G+ +
Sbjct: 334 -ATDFQVEAAISKVFASEAAWFVADECIQILGGTGFMKSAGVERVMRDLRIFRIFEGTND 392

Query: 449 AMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC------------- 494
            + L + L  L+      + L   L+  +G+ G  +   L  +                 
Sbjct: 393 ILRLMIALTGLQGAGKRLQALQKQLKNPVGNIGALMDFGLGRTKRALGMNTGPSLTEHVH 452

Query: 495 KEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           K+ +  A  +++ +     A    L + G   +   FL  R  D     + M+ 
Sbjct: 453 KDLQPSADQVSKAMGDFGGAVEGLLMKYGKKVLEQQFLLKRLADATMDLYGMVA 506



 Score = 41.5 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 10/98 (10%)

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +++Q  + + +AD  +D+    A+  R + S +     S+  A       I + +C 
Sbjct: 481 GKKVLEQQFLLKRLADATMDLYGMVAILSRASRSLNRGSETSQHEAM------ICQVFCS 534

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH----YRESPA 439
           + A  +               +++++R      R    
Sbjct: 535 EAADRIARNLRSLQDPQSLSNDKTMSRIAGEVVRNQRV 572


>gi|301062921|ref|ZP_07203502.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300442990|gb|EFK07174.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 380

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 125/377 (33%), Gaps = 29/377 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             + +D+ E       + R++   G        +++               +       G
Sbjct: 27  RAQEFDRNESFD--QDIWRKACELGFVGVFIPEAYDGAGYGFLEHSMITEEFWAVDPGIG 84

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +      + ++ L  T    +   PK+ + E               IG  +TE   G+
Sbjct: 85  QAVLSCTFGSEILILFGTEEQKQMVLPKLVAGE-------------ALIGTAITEPNAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV--PRLLEDGS 266
           D    T+   K  D  + ++G K F ++   +D  ++    +            +L    
Sbjct: 132 DPTGATTTAVKDGD-SWVINGSKIFATNGDLADYMMLFCLTDPDNPSKHRRHSFILVPTD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +L  K+G R++ T EL   +       L+G        +        L     
Sbjct: 191 SEGYESSKLHGKLGIRASDTAELSLKDLRVPVENLVGREGEGFNELMAFFNRTRLHICAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   R ++ E+I + + R   G  L      +  +A++A    AA  L +  A   D  
Sbjct: 251 GVGLARSAIEESIRHTKAREQFGAPLASFQNTQFKLAEMATRTRAARNLYYEAAWELDHG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                       +  + K++  + A      A++  GG GYI+E  + R YR++    I 
Sbjct: 311 N-------IDHGLIAMAKWYSAENAVRCADAALQMHGGYGYIDEYKVQRLYRDAKILEIY 363

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       V   L +
Sbjct: 364 EGTKEMEKTIVAGTLLR 380


>gi|300697265|ref|YP_003747926.1| Butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299073989|emb|CBJ53526.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum
           CFBP2957]
          Length = 377

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 134/399 (33%), Gaps = 43/399 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               + AR   A    P    +   G   D V         + +    GL   I    + 
Sbjct: 10  RMILDAARDFAAERLAPHAAQWDRDGSLPDDV---------IAQMGELGLLGMIVPLDWG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +      L   T      + P + +    
Sbjct: 61  GSYTDYVAYALALEEIAAGCAACATMMSVHNSVGCGPILKFGTEGQKARYLPDLATG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF- 243
                            LTE + G++   + ++   + DG + L+G K F+++       
Sbjct: 118 ----------RAIGAFCLTEPQAGSEANNLRTRAV-LRDGRWVLNGSKQFVTNGARAKLA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R ++K+G R++ T  +   +         N
Sbjct: 167 IVFAVTDPGAGKRGISAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVP---QAN 223

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E +KI L  L+   + ++   V +       A  YA  R   G  L +   +  
Sbjct: 224 LLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIAN 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A      K    E       A   K +  ++A  + ++A++
Sbjct: 284 MLADMATRLNAARLLVHHAARLRSLDKPCLSE-------ASQAKLYASELAEEICSKAIQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ + ++ RHYR++    I  G+     + +  
Sbjct: 337 IHGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|156365642|ref|XP_001626753.1| predicted protein [Nematostella vectensis]
 gi|156213641|gb|EDO34653.1| predicted protein [Nematostella vectensis]
          Length = 392

 Score =  252 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 140/415 (33%), Gaps = 32/415 (7%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
                   +S   + L  MA     +     P     DK   +P    +++++   GL  
Sbjct: 2   FAYFLSLAMSDELRALQDMARKFAREEIM--PKAAEHDKTGEYP--WEIIKKAHEVGLVN 57

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                ++  +                A       +  +  +   V L       K +  +
Sbjct: 58  GHIPEAYGGIGLGVLDGCVVTEELSYACSGIQTAIEANSLAEMPVILAGNEEQKKKYLGR 117

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +              K  +     +TE   G+D+A I ++ +K  D         W  + 
Sbjct: 118 MI-------------KEPIMAAYCVTEPTAGSDVAGIKTRAEKKGDEYVINGQKMWITNG 164

Query: 238 PMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            +++ + +LA+ +            + D    G+   R +  +G R++ T  + F +   
Sbjct: 165 GVANWYFVLARTDSSASAGKGFTGFIVDADTPGVTPGRKEQNMGQRASDTRGITFEDV-- 222

Query: 297 FLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            ++   NV        KI +          A  +V   R +L EA  Y+  R   G  + 
Sbjct: 223 -VVPKENVLGAEGIGFKIAMGAFDKTRPPVASSAVGLARRALEEATKYSMERKTMGKYIC 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   ++  +AD+A+ +  A   + R A   D+ +  +  A+ A+ +A      C      
Sbjct: 282 EHQAVQFLLADMAIGVETARLATQRSAWEIDQGRRNTYYASIAKCLAGDVANKCTTRWTD 341

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
                +   GG+G+ +E  + +  R++    I  G+     + +   L +   + 
Sbjct: 342 -----LGIFGGNGFNQEYPVEKLMRDAKIFQIYEGTAQIQRMIIGRSLIEAAKMM 391


>gi|124003158|ref|ZP_01688008.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
 gi|123991256|gb|EAY30687.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134]
          Length = 392

 Score =  252 bits (645), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 141/361 (39%), Gaps = 28/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +R    G        ++        + I      +            +  S ++V 
Sbjct: 40  REIFKRFGDMGYLGIALPEAYGGTDLDYFYSIIFNEEMVRVNSGGFGAAIGAHASLALVH 99

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +         + +               P  K  +   L ++E  GG+D+A + +   + 
Sbjct: 100 MNAEGNEAQKQKYLE-------------PGIKGELIGCLAISEPFGGSDVAGMRTTAVRE 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  Y ++G K F+++ +S  FI+ A +         +  ++ D    GL   +L NK+G
Sbjct: 147 GDH-YIINGSKTFITNGVSSDFIVAAVKTNPDAKSGGISMIVIDRDTPGLTATKL-NKLG 204

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++ T E+ FS+       LLG  N     +     L  L  AI  ++    +L   + 
Sbjct: 205 WRASDTGEIAFSDVKVPVTNLLGGENQGFYYIMQHFALERLMLAIGGMATADYALEVTLK 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  +     ++  +A +A +I       + +A+ + +     +EAA A+++ 
Sbjct: 265 YMDEREAFGRKINRFQALRHRVAQMASEIEMNRMFIYAIADRYQQGDYVVKEAAMAKLL- 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   +++  V+ + ++  GG G++E+  +AR YR+S   +I  G+   M   +  +
Sbjct: 324 ------GTQLSDRVVYDCLQMFGGYGFMEDYPLARMYRDSRLGTIGGGTSEIMCEIISKM 377

Query: 458 L 458
           +
Sbjct: 378 M 378


>gi|41407811|ref|NP_960647.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396165|gb|AAS04030.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 387

 Score =  252 bits (645), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 135/378 (35%), Gaps = 30/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  ERW     H        ++   GL        +       A  +        A  +
Sbjct: 33  TPNQERW--AAQHAVDREFWNKAGDAGLLGLDLPEEYGGAGGDFAMNVVVQEELAYAYDQ 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +    + W PKI S E               + + +TE   
Sbjct: 91  GFGFAVHSPIVAHYIWAYGSDEQRRRWLPKIISGE-------------AVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ ++ +  ++  D  Y ++G K F+S+    D  +++A+ +   G   V  ++ +  
Sbjct: 138 GSDLQSVKTTARRDGD-FYVINGSKTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETD 196

Query: 267 PN--GLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDS 320
            N  G    R+  K+G  +  T EL FS+        L     +    + +      L  
Sbjct: 197 ENLAGFERGRVLAKMGQHAQDTRELFFSDMRVPVANLLGAQEGLGFYQLMEQLARERLII 256

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +  +   V++ EAI Y+R R   G  +      K  +A+   +  A   +       +
Sbjct: 257 ATICEALAEVAVLEAIKYSREREAFGRPIGKFQHTKFVLAECKTEALAIKTMVDYAVGQY 316

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K+    A+ A       K +  + +  ++ + ++  GG GY+ E  IA  Y  S  N
Sbjct: 317 LDGKNDPATASMA-------KLFAAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVN 369

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 370 RIYGGTSEIMKEIISRSL 387


>gi|254465622|ref|ZP_05079033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
 gi|206686530|gb|EDZ47012.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           Y4I]
          Length = 567

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/469 (19%), Positives = 168/469 (35%), Gaps = 38/469 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
            V+S    E  +M +     L   G   P       +   P +    +     G      
Sbjct: 35  DVVSAILNEAGKMCDEVLAPLQRNGDLTPAYLENGVLRTSPGFADGFKAISEGGWIGMSA 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +            +   A L        S      +    +  +   + PK+ S
Sbjct: 95  PEEHGGMGLPLTVATAVNEMMAGACLSLQLAPLMSQGQIEALEHHASDAIKDLYLPKLIS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K ++S   +
Sbjct: 155 GEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIYISWGDN 201

Query: 241 DA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ L D     G  N L    L++K+G   +
Sbjct: 202 DFCENICHLVLARLPDGAPGTKGISLFLVPKFLPDADGNPGKANDLKVVSLEHKMGLHGS 261

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  +++    G+L+G  +     +  M     L      V     +   A+ YA  R  
Sbjct: 262 PTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLGVGGQGVGAGEGAYQHALAYALERKQ 321

Query: 345 SG---GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE--EAAYARIMAPI 399
                G++ D   ++R + ++  D+ A+ A+    A + D   +  E   AA A  + PI
Sbjct: 322 GKSASGVIADHADVRRMLMEMKADLFASRAILLACAQAIDMQTATGEKDWAARAAFLTPI 381

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLL 458
            K +       V    ++  GG G+IEE   A++YR+    +I  G+     +D V   +
Sbjct: 382 AKAFGTDTGIRVSETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQSMDLVARKM 441

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             G      L   +E+    +      +       C+  +    +L  +
Sbjct: 442 MDGGETAFALIDEIEEQAERARATHPNMAESVWQACESLREATEWLVAQ 490


>gi|254234405|ref|ZP_04927728.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719]
 gi|126166336|gb|EAZ51847.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719]
          Length = 606

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 92/494 (18%), Positives = 173/494 (35%), Gaps = 61/494 (12%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A++       L H+    G   +  +V     +       +  G      
Sbjct: 37  DMVDAILGECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPKGYKEAYEAYVAGGWQGLSH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKI 178
              +          + A +  +M        M P  S+ + + +    T    + +   +
Sbjct: 97  PVEYGGQGLP--MSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLVPL 154

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
               +  T             + LTE + GTD+  + ++ +   DG Y +SG K F+SS 
Sbjct: 155 TEGRWGGT-------------MCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSG 201

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       I+LA++         +  F+VP+ L       G  NG+    L+ K+G +
Sbjct: 202 EHDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIK 261

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++AT  + F    GFL+G  N     +        + +AI  V+   ++   A+ YAR R
Sbjct: 262 ASATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARER 321

Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRL---ANSFDEAKSRS 387
                             L+    ++R +           AL +     A+   +    +
Sbjct: 322 RSMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILSN 381

Query: 388 EEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           ++A Y R       + PI K    ++        M+  GG GYI E  + +  R++   +
Sbjct: 382 DDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIAT 441

Query: 442 ILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  G+     LD+L    LL             + +      K    +   ++ L K   
Sbjct: 442 LYEGTTGIQALDLLGRKVLLMTQGKAVRDFTRGVARFAVDLLKNEPRMRGRALVLLK-LC 500

Query: 499 GLARFLTEKIALAS 512
                LT +IAL++
Sbjct: 501 AQWNLLTLRIALSA 514


>gi|332025636|gb|EGI65798.1| Putative medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Acromyrmex echinatior]
          Length = 434

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 18/274 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
           T +   +  T     +D+A I ++ +K            W  +  +++ + +LA+     
Sbjct: 161 TGIITAIETTSLGVRSDVAGIKTKAEKKGKEWIINGTKMWITNGGVANWYFVLARTNPDP 220

Query: 254 GC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                      + + + +GL   R +  +G R++ T  + F +       + NV  G  E
Sbjct: 221 KAPANKAFTGFIVERNSDGLTPGRKEINMGQRASDTRMITFEDVRVP---EENVLLGEGE 277

Query: 311 DMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             KI +          A  +    + +L EA  YA  R   G  + +  V+   +AD+ +
Sbjct: 278 GFKIAMKTFTRTRSPVAAAATGLAQRALDEATKYALERKTFGKPIAEHQVIAFMLADMTI 337

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I  +     + A + D+  S       A ++A I K +C  +A     +A++  GG+G+
Sbjct: 338 GIETSRMAWMKAAWAVDKNLSN------ATMLASIAKCYCSDVANKCATDAVQVFGGAGF 391

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + +  R++    I  G+     L +   L
Sbjct: 392 NSEYPVEKLMRDAKIYQIYEGTAQIQRLIISRAL 425


>gi|146277380|ref|YP_001167539.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555621|gb|ABP70234.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 379

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 140/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q +  MA           P    W++    P   AL  +    GL       
Sbjct: 2   DFALSEEQQAIFDMAREFGA--AEIAPNARAWEEAGTIP--RALWPKVAELGLGGIYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S       M+    +  +   W P +    
Sbjct: 58  EHGGSGLGRLDATLVFEALAMACPSVAAFLSIHNMCGGMIDRYGSEALKARWLPGMC--- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                       +  +   LTE   G+D AA+ ++     +G Y LSG K F+S    SD
Sbjct: 115 ----------NLTTLVSYCLTEPGAGSDAAALRTRAVAGPEG-YRLSGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           A++ + +  G  G   +  LL      GL +  L++K+G R+  T +++F +       L
Sbjct: 164 AYLTMCRT-GAEGPKGISTLLVPAGTPGLSFGGLEDKMGWRAQETRQVQFDDCAVPAENL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  ++ G + +    + Y   R   G  L +   ++  
Sbjct: 223 VGEEGRGFSYAMAGLDGGRLNIAATALGGAQAAFDATLSYMSERRAFGRRLDEFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ + +  A     + A   D+          A     + K      A  V  + ++ 
Sbjct: 283 LAEMEVKLQQARIFLRQAAWKLDQGAPD------ATRFCAMAKLSVTDAAFEVANQCLQM 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + +   L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIIARSL 376


>gi|93004979|ref|YP_579416.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92392657|gb|ABE73932.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 606

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 84/473 (17%), Positives = 165/473 (34%), Gaps = 58/473 (12%)

Query: 69  TAQELARMANYNTPQL-HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             Q +A  A      L       G  ++   V     +    ++ +  G     +   + 
Sbjct: 42  ILQGMADFAENVLAPLYQPADEEGCHFENGVVTTPKGFKEAYQQFVDGGWQGISYPEEYG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  A +   A          S    + +    T    + +  K+    +  
Sbjct: 102 GMNLPTSLNLIKAEMIGTANWPWAMYPGLSTGCINTIMQYGTDEQKETYLHKLVEGSWAG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + S+     D  Y LSG K F+SS   D    
Sbjct: 162 T-------------MCLTEPQCGTDLGQVKSKAIPQDDASYKLSGTKIFISSGEHDLTEN 208

Query: 242 -AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+ L +     G  NG+    +++K+G  S+AT  L
Sbjct: 209 IIHIVLARLPDAPEGTRGISLFIVPKFLPNAEGEIGERNGVSCGSIEHKMGISSSATCVL 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VS 345
            F +  G+L+G+ N     +        + + I  ++   +S   A+ YA+ R     +S
Sbjct: 269 NFDDAVGYLIGEPNKGLKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLS 328

Query: 346 GGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------EAKSRSE 388
           G          +I    ++R +           ++ +  A   D         + +   +
Sbjct: 329 GTKDPEKVADAIIHHADVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEK 388

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  ++         +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKLGFYTPILKGFLTELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTG 448

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKE 496
              LD+L    +L+    +     S++ +  G     K +   +     LC E
Sbjct: 449 IQALDLLGRKVILQSKGKIIRDYTSSIMKWCGEYALDKDMRKFVWALTKLCAE 501


>gi|226362011|ref|YP_002779789.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240496|dbj|BAH50844.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 136/373 (36%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       F           +  +      +     M     
Sbjct: 42  EYPEKWIEQMK---QIGIYGLAVPEEFGGSPVSMPCYAQVTQELARGWMSLAGAMGGHTV 98

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T    + + PK+ + E   T             + LTE  GG+D+ A+++ 
Sbjct: 99  VAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDLQAMSTT 145

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +   D +       W  ++  S    +L + + +       +  +L +  P GL   R 
Sbjct: 146 AKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIVLVEHGP-GLTVSRD 204

Query: 276 KNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             K+G +   T EL F N        L G      G +        +  A  ++     +
Sbjct: 205 LPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVACRALGVATAA 264

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D       EA 
Sbjct: 265 LEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDSGDRCDMEAG 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 325 MA-------KLYASEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 377

Query: 452 LDVLNLLEKGTNL 464
             +++ L     L
Sbjct: 378 NVIVSQLVSRGGL 390


>gi|94969498|ref|YP_591546.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551548|gb|ABF41472.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 597

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/469 (18%), Positives = 173/469 (36%), Gaps = 51/469 (10%)

Query: 94  WDKVEFHPAW---HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            +++E H  W     LL+++   GL  +     +      +      A     +   +  
Sbjct: 56  IERIE-HKEWDVTRELLKKASEAGLTNADVPAEYGGSEMDKVSSALIADHIAKSGSFSVS 114

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S      +    T    K + P++ S E             +     L+E   G+D
Sbjct: 115 YGAHSGIGTLPIVYFGTEDQKKKYLPRLASGE-------------LIGAYALSESTSGSD 161

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
                ++    +DG  Y L+G K ++++   +D +I+ A+V+G          + + +  
Sbjct: 162 AMNPRTKAVLAADGKHYVLNGEKMWITNANFADLYIVFAKVDGEK----FTAFIVEKTFP 217

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G      + K+G R ++T  L  ++    +   L  +  G +    IL           V
Sbjct: 218 GFSVGAEEKKLGIRGSSTAPLILNDCQVPVENLLGEIGKGHIIAFNILNIGRFKLGAACV 277

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381
            G R  L+  I YA++R   G ++ D  +++  +A I   I    A+ +R     D    
Sbjct: 278 GGARNILSHTIAYAKQRKAFGKVIADFGLIREKLAQIVAGIYTGEAMVYRTVGMMDVALG 337

Query: 382 --------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                   E+K   +      +   I K W  +M    + E ++  GG G++EE    R 
Sbjct: 338 EVEKGGAEESKETRKAIEEYAVECSIIKVWASEMLDMAVDETVQVYGGYGFVEEYPAERA 397

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGT-----NLFEQLFSTLEQDLGSSGKKVITILR 488
           YR+S  N I  G+     + +   L K        L   +   +++ +          + 
Sbjct: 398 YRDSRVNRIFEGTNEINRMIITGFLMKRAISGQLPLLPAIKKVMDEVMAG---PSTDEIE 454

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAAL-----YRAGMNDIADVFLEN 532
            +++  +   G A+ +   +A A+S   +      +  M  IAD+ +E 
Sbjct: 455 GALAAERTIVGNAKKVGLLVAGAASQKYMQDLVNQQEVMGAIADIIIEA 503


>gi|328949580|ref|YP_004366915.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328449904|gb|AEB10805.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 378

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 138/399 (34%), Gaps = 36/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +   AQ  AR      PQ  A+   G         PA  A++      GL       
Sbjct: 9   QRAIQTLAQRFAREV--IAPQAAAHDQNGR-------FPA--AIVEEGRRLGLVNLRVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +           +  A       +     M  +  +A  + L  TP   + +  ++    
Sbjct: 58  AHGGGGLGVLEVVLVAEALAWGCVGIAAAMLLNNLAADALRLAGTPAQQRRYYARLAEGF 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D AAI ++ +   DG        W  ++P++D 
Sbjct: 118 ---------------AAYALTEPHAGSDAAAIRTRARPTPDGYVLTGRKTWISNAPVADF 162

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299
           F++ A+ +   G   +   L D    G+       K+G R+    E+ F         LL
Sbjct: 163 FVVFAKTDPEAGHAGISAFLVDREQPGVRVGPPLAKLGQRAAPAAEVVFDEVSLSREALL 222

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G           +        A  +V   + +L EA+ YA +R   G  +     +   +
Sbjct: 223 GREGEGFKLAMRVFDHSRPMVAAFAVGLAQRALDEALRYATQRTAFGQPIARFQGVGFKL 282

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ +   AA  L++  A   D+ +  + EAAYA+  A          A     EA++  
Sbjct: 283 AEMGMHTQAARLLTYHAAWKADQGQPNTLEAAYAKAFAA-------DHAMQAALEAVQIH 335

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  E  + +  R++    I  G+     + +   L
Sbjct: 336 GGYGYSPEYPVEKLMRDAKLLQIYEGTSEIQRVIMTREL 374


>gi|256394462|ref|YP_003116026.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360688|gb|ACU74185.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 382

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 130/375 (34%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    ++  E  P    + R     GL    +D  +    +     ++         L  
Sbjct: 30  PRAAEYEAAERFP--REVFRTLGQAGLLGLPYDEEYGGGGQPYEVYLQVVEELARTWLTI 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +S    +   +A   +      W P +   +                   L+E + G
Sbjct: 88  GLGVSVHSLACYGLANYGSAEQKAKWLPGMLGGDQ-------------LGAYCLSEPQSG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+T++  +  D         W   S  +D + ++ +     G   +  LL +    
Sbjct: 135 SDAAALTTRAVRSGDEYAVTGTKAWITHSGQADFYTLMVRTSDD-GAKGISALLAENGTP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL + + + K+G R + T ++           LLG                 L  A  +V
Sbjct: 194 GLGFGKPEKKMGMRGSVTAQVLLDGARVPADRLLGAEGQGFSIALSALEAGRLGIAACAV 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A+ YA  R   G  + +   +   +AD+A  +A   A     A   D    
Sbjct: 254 GVAQAALDAAVEYATSRRQFGHAIAEFQGVGFMLADMATAVAVGRAAYLAAARRRDAGLP 313

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EAA A       K +C  MA  V  +A++  GG GY  +  + R+ RE+    I+ G
Sbjct: 314 YGTEAAMA-------KLFCTDMAMKVTTDAVQVFGGYGYTADFPVERYMREAKVLQIVEG 366

Query: 446 SGNAMVLDVLNLLEK 460
           +     L +   L +
Sbjct: 367 TNQVQRLVISRNLTR 381


>gi|195584840|ref|XP_002082212.1| GD11444 [Drosophila simulans]
 gi|194194221|gb|EDX07797.1| GD11444 [Drosophila simulans]
          Length = 627

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 162/413 (39%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 268

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 269 PEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 325

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 326 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 386 LEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDTGLERVLRDLRIFRIFEGTN 438

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 439 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 498

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 499 SELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVDEQILLTRLANAAIDIYAMV 551


>gi|134102803|ref|YP_001108464.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005898|ref|ZP_06563871.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915426|emb|CAM05539.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 380

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/390 (20%), Positives = 140/390 (35%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A   TP +  +   G     V    AW A    +   GL     D  +     +   
Sbjct: 19  AFIAKELTPHVAEWEQAG-----VVSRDAWLA----AGEQGLLGFAIDEEYGGGGTEDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +      + A +            A  +  + T    + W P   S E          
Sbjct: 70  FNVVFDEELVAAGVSGFGSPLHVDIIAPYLTKLATEEQKRRWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
              +   + +TE   G+D+  I +   +  D  Y L+G K F+S+ + +D  I++A+ + 
Sbjct: 120 ---LITAIAMTEPGAGSDLQGIRTTAVRDGDE-YVLNGQKTFISNGILADLVIVVARTDP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
             G   +  L+ +    G    R   KIG +S  T EL F++        L     G V 
Sbjct: 176 DAGHEGISLLVVERGTEGFERGRNLEKIGQKSQDTAELFFNDVRVPAANLLGEEGKGFVY 235

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+ L    L  A+ S +     L     Y R R   G  +      +  +A++A ++  
Sbjct: 236 LMQNLPQERLSIAVASAASAEKVLDVTKEYCRTRTAFGRPIGKFQNTRFELAEMATEVQI 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               + R  +     +   E AA A+        W  +M   V+   ++  GG GY+ E 
Sbjct: 296 GRVFTDRCVSDHLRGELGVEHAAMAKW-------WLSEMNKRVVDRCLQLHGGYGYMLEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + ++   +I  G+   M   V   +
Sbjct: 349 PVAKAFLDTRIQTIYGGTTEIMKEIVGRSM 378


>gi|254705458|ref|ZP_05167286.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|261312865|ref|ZP_05952062.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261301891|gb|EEY05388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
          Length = 376

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 122/357 (34%), Gaps = 25/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDRD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERLIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +  
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAR 375


>gi|309781061|ref|ZP_07675799.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA]
 gi|308920127|gb|EFP65786.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 594

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/448 (19%), Positives = 179/448 (39%), Gaps = 57/448 (12%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +     +    G         +      +   I  A + ++        + P +T  ++
Sbjct: 76  GFKEAFAQFGQGGWQGVQHPLEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAI 133

Query: 162 VALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL+T  T    + + PK+ S E+  T             + LTE + G+D+A + ++ +
Sbjct: 134 EALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAE 180

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
            + DG + + G K F++    D       ++LA+  G       +  F+VP+ + +    
Sbjct: 181 PVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVVPKFMVNPDGS 240

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G+ N      +++K+G +++ T  L+F +     G L+G+ N     +  M        
Sbjct: 241 LGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRGLEYMFIMMNAARYAV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATA 371
            +  +     +  +A+ YAR R  S            +I  P +KR +  +      A A
Sbjct: 301 GMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARA 360

Query: 372 LSFRL------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++         +   +  +R + AA    + PI K W  +M+  V +  ++  GG G+I
Sbjct: 361 LAYVAAAACDAGHHSADDAARKQNAALYEFLVPIVKGWSTEMSIDVTSLGVQVHGGMGFI 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL---EQDLGSSG 480
           EE   A+ YR++    I  G+      D++    +  G  +   + + +   E  L + G
Sbjct: 421 EETGAAQFYRDARILPIYEGTTAIQANDLIGRKTVRDGGAVALGICAEIAKVEAALAAKG 480

Query: 481 KKVITILRDSISLCKED-KGLARFLTEK 507
                 +R  ++  +E  + + RF+ E+
Sbjct: 481 GAHCDAMRARLAAGREALESVVRFVVEQ 508


>gi|39970147|ref|XP_366464.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|149209547|ref|XP_001522148.1| hypothetical protein MGCH7_ch7g256 [Magnaporthe oryzae 70-15]
 gi|86196211|gb|EAQ70849.1| hypothetical protein MGCH7_ch7g256 [Magnaporthe oryzae 70-15]
 gi|145017682|gb|EDK02045.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 470

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 139/381 (36%), Gaps = 29/381 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R DK    PA   +  +    GL     + S   +    QAH I    L   +   A 
Sbjct: 110 AARTDKENEFPA--DMWGKLGDMGLLGVAAEESVGGLAMGYQAHCIVMEELSRASASIAL 167

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + + L   P   + + P + +                   L ++E   G+
Sbjct: 168 SYAAHSQLCVNQLQLNGNPEQKQRFMPDLIAG-------------RKVGALAMSESGSGS 214

Query: 210 DIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           D+ ++ ++  + +DG          W  + P +D  I+ A+ +        +   + +  
Sbjct: 215 DVVSMRTRATRTADGSGWLLNGSKMWITNGPDADVIIVYAKSDTECQPSKGITAFIVERQ 274

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
           P GL   R  +K+G R + T EL   N       +LG++N     + +   L  L  +  
Sbjct: 275 P-GLQCLRKLDKMGMRGSNTGELVLENVIVPDENVLGEVNAGVRVLMEGLDLERLVLSAG 333

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M+ +L  A+ YA  R   G  + +  +++  +AD+   +  + A ++  A   D  
Sbjct: 334 PLGIMQAALDVALPYAHARQQFGRPIAEFQLVQGRLADMYTKLQVSRAYTYATARRID-- 391

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E              +  + A  V  + ++ +GG GY E+   +R  R++    I 
Sbjct: 392 ----ESGEIKTADCAGAILYAAERATEVALDCIQVLGGMGYTEDMPASRLLRDAKLYEIG 447

Query: 444 LGSGNAMVLDVLNLLEKGTNL 464
            G+     + +     +  +L
Sbjct: 448 AGTSEVRRMVIGRYFNREYSL 468


>gi|330985663|gb|EGH83766.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 383

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 139/399 (34%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++     D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRADLQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|640350|pdb|3MDD|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640351|pdb|3MDD|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640352|pdb|3MDE|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 gi|640353|pdb|3MDE|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
          Length = 385

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 136/400 (34%), Gaps = 47/400 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            TA++ AR      P    Y   GE       +P    LL+R+   GL  +    SF  +
Sbjct: 15  ATARKFAR--EEIIPVAAEYDRTGE-------YPV--PLLKRAWELGLMNTHIPESFGGL 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                             +    L++  +                   P I    Y    
Sbjct: 64  GLG---------------IIDSCLITEELAYGCTGVQTAIEANTLGQVPLIIGGNYQQQK 108

Query: 188 K--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           K    M +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +
Sbjct: 109 KYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFL 168

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+ +              + +    G+   R +  +G R + T  + F +         
Sbjct: 169 LARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVP---KE 225

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV TG     KI +          A  +V   + +L EA  YA  R   G +L +   + 
Sbjct: 226 NVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGIS 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  A     R A   D  +  +         A I K +   +A  +  +A+
Sbjct: 286 FLLADMAMKVELARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAV 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 339 QVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAR 378


>gi|296269561|ref|YP_003652193.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092348|gb|ADG88300.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 389

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/402 (19%), Positives = 150/402 (37%), Gaps = 30/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL-HCSIWD 121
              L+   QEL R+A     +     P     D+ +   +   L   +   GL H  + +
Sbjct: 8   ALDLTEEQQELIRLARDFAER--EIRPRAAEVDEADV-ESPLDLWESAAKIGLTHFMLPE 64

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 V     ++          +  G+ ++ +   A  +  + T    + W   +   
Sbjct: 65  EYGGGGVTDLLTQVLVQEELCYGDISIGNFLTSNGFFAGPIEALGTEEQKRKWLGMLC-- 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
               T + P         L +TE   G+D AA+ ++  +  D         W  ++P ++
Sbjct: 123 ----TERPP------ITALAVTEPGVGSDAAALQTRAVRQGDHYVLNGQKTWISNAPYAE 172

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            FI+ A ++  +    V   +   +  GL   +   K+G R     E+   +    +   
Sbjct: 173 YFIIFATIDPSLRSKGVTAFVVPRNTPGLSVGKPMRKMGQRGIVNAEVFLDDVRVPVENR 232

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMK 356
           L         +  +   D++ + +           L  A+ YA+ R   G  +I+   + 
Sbjct: 233 LGDEGQGFYGL--MRTFDASRILIGASATGLARAALDAALQYAKERRQFGTAIINHQAVA 290

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  +  A  L+ R A  +D+  S +EEA+ A+++A        + A  V A A+
Sbjct: 291 FRLADMAAKVDTAHLLTVRAARLYDQGLSVTEEASMAKLVA-------SENASWVTAAAL 343

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY  E  + R  R++    I  G+ +   L +   L
Sbjct: 344 QTHGGWGYSREFPLERWMRDAKLEEIEEGTSDIQRLIISRRL 385


>gi|149709719|ref|XP_001497474.1| PREDICTED: similar to Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial precursor (MCAD) [Equus caballus]
          Length = 426

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 134/398 (33%), Gaps = 43/398 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            TA++ AR      P    Y   GE       +P    L++R+   GL  +    S   +
Sbjct: 55  ATARKFAR--EEIVPVAAEYDKTGE-------YPV--PLIKRAWELGLMNTHIPESCGGL 103

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                                   +  +      V +    +  K +  ++         
Sbjct: 104 GLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDQQQKKYLGRLT-------- 155

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +LA
Sbjct: 156 -----EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLA 210

Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + +              + +    G+   R +  +G R + T  + F +         NV
Sbjct: 211 RTDLDPKAPANKAFTGFIVEADTPGVQIGRKELNMGQRCSDTRGIVFEDVKVP---KENV 267

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G     KI +          A  +V   + +L EA  YA  R   G +L++   +   
Sbjct: 268 LIGEGAGFKIAMGSFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQGVSFL 327

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A+ +  A     R A   D  +  +         A I K +   +A  +  +A++ 
Sbjct: 328 LAEMAMKVELARLSYQRAAWEIDCGRRNT-------YYASIAKAFAGDIANQLATDAVQI 380

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 381 FGGNGFNTEYPVEKLMRDAKIFQIYEGTAQIQRLIIAR 418


>gi|67968981|dbj|BAE00847.1| unnamed protein product [Macaca fascicularis]
          Length = 655

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 153/415 (36%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TLAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D   + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADILTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A+ YA  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 353 RGIITKAVDYATNRIQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 410

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 411 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|91789001|ref|YP_549953.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698226|gb|ABE45055.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 596

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/489 (18%), Positives = 187/489 (38%), Gaps = 65/489 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-----WDKVEFH-PAWHALLRR 109
              E  G        +E AR    N   L      G++      D V    P +    ++
Sbjct: 27  PGFEDAGFETAQAVLEECARF---NQDVLSPLNWEGDKNPSSWKDGVVTTTPGFKQAFKQ 83

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167
               G         F      +   I AA   ++        + P ++  ++ AL+T  +
Sbjct: 84  YAEGGWQGLQHPAEFGGQGLPK--TIGAACGEMLNSANMSFALCPLLSDGAIEALLTAGS 141

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             +   +  K+ S ++  T             + LTE + G+D+A + S+ +   DG Y 
Sbjct: 142 DDLKAIYLEKLVSGQWTGT-------------MNLTEPQAGSDLAMVRSRAEPQPDGTYK 188

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           + G K F++    D       ++LA+V G       +  F+VP+ L +     G+ N + 
Sbjct: 189 VFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGSLGARNDVH 248

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              +++K+G +++ T  L++ +     G+++G+ N     +  M         +  ++  
Sbjct: 249 CVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAVGMQGIAVA 308

Query: 329 RVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRL--- 376
             +  +A+ +AR R  S            +I  P +KR +  +   I    A++      
Sbjct: 309 ERAYQKAVSFARERVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRAMASVAAAA 368

Query: 377 ---ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
              ++   +A+ R +  A+   M P+ K +  +M+  V +  ++  GG G+IEE   A++
Sbjct: 369 YDASHHHPDAEVRKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQY 428

Query: 434 YRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQ---DLGSSGKKVITILR 488
            R++   +I  G+      D++       G    + +   +E    +L   G      + 
Sbjct: 429 MRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQGNADAVAVA 488

Query: 489 DSISLCKED 497
             +   +E 
Sbjct: 489 RRLKAAREA 497


>gi|254524202|ref|ZP_05136257.1| acyl-coa dehydrogenase family member 8 [Stenotrophomonas sp. SKA14]
 gi|219721793|gb|EED40318.1| acyl-coa dehydrogenase family member 8 [Stenotrophomonas sp. SKA14]
          Length = 388

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/394 (20%), Positives = 134/394 (34%), Gaps = 26/394 (6%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             AQ+  R A  +  Q     P   RWD     P     + ++   G      D      
Sbjct: 10  EEAQQAYREAARDFAQAE-LAPHAARWDAEGIFP--REAIAKAGELGFCGLYMDPEVGGS 66

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              +                    +S    ++ MV+    P +   W   +         
Sbjct: 67  GLSRLDAAVVIEELANVDPSTAAYISIHNMASWMVSKWGQPALRDAWGQDL--------- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE   G+D A++ +   +  D    L+G K F+S   +   +++ 
Sbjct: 118 ----AAGLKLASYCLTEPGAGSDAASLKTTAVRDGDHF-VLNGSKAFISGAGATELLVVM 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
              G  G   V  +       G+ + R + K+G  S  T  + F N    +   L     
Sbjct: 173 ARTGGAGAGGVSAIAVPADLPGVSFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGG 232

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK L    ++ A  S+   + +L  A  Y   R   G  L +   ++  +AD+A+
Sbjct: 233 GFKLAMKGLDGGRINIAACSLGAAQGALDAARRYMGERRQFGKALAEFQALQFKLADMAI 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  +    A   D        A  A +   + K +       V  EA++  GG GY
Sbjct: 293 ELVAARQMVHTAARKLDAG------AGDANVWCAMAKRFATDAGFNVCNEALQIHGGYGY 346

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I E  I R  R+   + IL G+   M + V   L
Sbjct: 347 IREYPIERLLRDCRVHQILEGTNEIMRVIVARHL 380


>gi|254474946|ref|ZP_05088332.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214029189|gb|EEB70024.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 383

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/413 (19%), Positives = 144/413 (34%), Gaps = 43/413 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S +  E ++L +       +E A       P+   +   G   D+        +  + + 
Sbjct: 8   SWMTDEHQMLADMTAQFITREWA-------PKFETWRKQGM-MDR--------STWQEAG 51

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +  V     H+         A L +      S   A  +    T    
Sbjct: 52  ELGLLCPSVPEEYGGVGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYILAYGTEEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E             +   L +TE   G+D+  I ++  K  + +Y LSG 
Sbjct: 112 QRWLPKMITGE-------------LVGALAMTEPSTGSDVQRIKTKAVKDGN-VYRLSGQ 157

Query: 232 KWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++      I + A+ +   G   +  + LE    +G    R   K+G  +  T EL
Sbjct: 158 KTFITNGQHANLILVAAKTDPSEGSKGISLVALETDGADGFTRGRNLEKVGLHAADTSEL 217

Query: 290 EFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F N        L      G  + M+ L    L  A  +V  M  ++   I Y + R   
Sbjct: 218 FFDNIAVPPENILGGAEGQGFYQMMQQLPQERLIIACGAVGAMEGAVERTIAYCKEREAF 277

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG L      +  + +       A A         DE      +   +   A + KYW  
Sbjct: 278 GGPLTQFQNTRFKLVECQTKTKVARAF-------LDECMVEHLQGKLSVEKAAMAKYWIT 330

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                V+ E ++  GG G+++E ++A  + ++    I  G+   M   +   L
Sbjct: 331 DTQGEVLDECVQLHGGYGFMQEYAVAEMWADARVQRIYGGTNEIMKELIARSL 383


>gi|330501353|ref|YP_004378222.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915639|gb|AEB56470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 596

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/464 (17%), Positives = 164/464 (35%), Gaps = 53/464 (11%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +  +V     +    ++ + +G         +      Q        + + A 
Sbjct: 59  DEEGCRLENGQVSTPKGFAEAYQQYVDNGWASMTGPVEYGGQGFPQLVAFAFHEMLMGAS 118

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L        +  +   +    +  + + +  K+ S ++                + LTE 
Sbjct: 119 LSFRVYSGLTEGAVLALHKHGSEMLKQQYLGKLVSGQW-------------TATMCLTEP 165

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVP 259
           + GTD+A + ++ +  +DG Y +SG K F+S    D       ++LA+  +   G   + 
Sbjct: 166 QAGTDLALLRTRAEPQADGSYRVSGSKIFISGGEQDLSENIIHLVLARLPDAPAGVKGIS 225

Query: 260 RLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            LL            G  N L    +++K+G +  +T  + F    G+L+G+ N     +
Sbjct: 226 LLLVPKFIAAADGTPGERNSLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQGLACM 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M         +  +     +   A+ YAR R  S G             +I+ P ++R
Sbjct: 286 FTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPEKPADPIINHPDVRR 345

Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +      +  +  L+   A   D       A++R      A ++ PI K +   M   V
Sbjct: 346 MLLTQKTLVEGSRMLAAYTARQLDLEHGAESAEARKAAGKRAALLIPIVKAFFTDMGQEV 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
            +  ++  GG G+I E  + +  R+S    +  G+     LD +   LL  G      L 
Sbjct: 406 ASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQ 465

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           +          +     L+D  ++ +   G  R L+ ++     
Sbjct: 466 AEFSALC--DAQATRPALQDMATVVQARLGEWRELSAEVITVCQ 507


>gi|110677891|ref|YP_680898.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109454007|gb|ABG30212.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 381

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 134/380 (35%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  P    +  +    GL       +                         
Sbjct: 24  PVAEELDRDERFPT--EIYAQMAQLGLFGICVPEAMGGPGMDTLAYAIVMEELSRGYASV 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                      +++    T      W P I                   +   +TE   G
Sbjct: 82  ADQCGLVELITTLLVTHGTQAQRDMWLPDIL-------------AAKTKVAYCITEPEAG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD++ I +   +  +G     G  W  ++P++D   +LA+ +   G   +   + D   +
Sbjct: 129 TDVSGIRTTAVRDGEGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFVVDLHAD 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSV 325
           G+     ++K+G R++    L F N        L         M  ++    +  A ++V
Sbjct: 189 GVARGPKEHKMGQRASQVGPLHFDNVTLPAHALLGAEGRGFHMMMSVLDKGRVGIAALAV 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA +R      + +   ++  +ADIA D+ AA  L+   A+  D    
Sbjct: 249 GIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDIG-- 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A     + K +   MA A  A+A++  GGSGYI+   + R YR++    I  G
Sbjct: 307 -----ADATKACSMAKCFAGDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQIYEG 361

Query: 446 SGNAMVLDVLN-LLEKGTNL 464
           +     + +   LL KG + 
Sbjct: 362 TNQIQRMIIARELLAKGADA 381


>gi|90420167|ref|ZP_01228075.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335501|gb|EAS49251.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 410

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 140/375 (37%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLE 147
           P   RW+  +  P    +L      G+        +   + R  A  I  A  Y      
Sbjct: 56  PHAARWEDEKALP--REVLTELAGLGMAAIYVRDDYGSGLSRLDAALIFEALSY--GDPS 111

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +S     A M+    +     +W PK+ S E                   LTE   
Sbjct: 112 VSAFLSIHNMVAWMIDSFGSEEQRAEWLPKLASME-------------KVASYCLTEPGS 158

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D AA+ +  +   +G Y L+G K F+S    SD ++++A+  G  G   +  +L +  
Sbjct: 159 GSDAAALRTSAKPNGNG-YVLNGTKSFISGAGFSDLYVVMART-GDAGPKGISAILVENG 216

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL +  L+ K+G  +  T E+         G LLG++               L+ +  
Sbjct: 217 TEGLSFGALEKKMGWVAQPTAEVRLDGCSVPGGNLLGEVGKGFAYAMMGLDGGRLNISAC 276

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   + +L ++I Y + R   G  L +   ++  +AD+  ++ AA     + A   D  
Sbjct: 277 ALGAAQAALDKSIAYMQDRQAFGKSLTEFQALQFRLADMETELQAARIFLRQAAWKLDTK 336

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A     + K +    +  V   A++  GG GY+ +  I +  R+   + IL
Sbjct: 337 APD------ATKHCAMAKRFVTDASFNVANMALQLHGGYGYLADYGIEKIVRDLRVHQIL 390

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M +     L
Sbjct: 391 EGTNEIMRMITARAL 405


>gi|113018|sp|P08503|ACADM_RAT RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|202689|gb|AAA40670.1| acyl-CoA dehydrogenase medium subunit (EC 1.3.99.3) [Rattus
           norvegicus]
          Length = 421

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 119/362 (32%), Gaps = 32/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++R+   GL  +    S   +                        +  +      V 
Sbjct: 75  FPLIKRAWELGLINTHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVI 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +    +  K +  ++              +  +     +TE   G+D+A I ++ +K  D
Sbjct: 135 IAGNDQQKKKYLGRMT-------------EQPMMCAYCVTEPSAGSDVAGIKTKAEKKGD 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  +   ++ + +L +                + +    G+   + +  +G
Sbjct: 182 EYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMG 241

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R + T  + F +         NV  G     KI +          A  +V   + +L E
Sbjct: 242 QRCSDTRGITFEDVRVP---KENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +       
Sbjct: 299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNT------- 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K +   +A  +  +A++  GG G+  E  + +  R++    I  G+     L +
Sbjct: 352 YFASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLII 411

Query: 455 LN 456
             
Sbjct: 412 AR 413


>gi|326564972|gb|EGE15173.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis
           12P80B1]
          Length = 606

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/487 (17%), Positives = 174/487 (35%), Gaps = 58/487 (11%)

Query: 69  TAQELARMANYNTPQL-HAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
             +  A  A      L       G   +  +V     +    ++ +  G     +   F 
Sbjct: 42  ILEGFADFAENILAPLYQPADAEGCTFKDGEVTTPTGFKEAYQQFVEGGWQAISYPEKFG 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    +  +  + +   A          +  S + +           + PK+ S E+  
Sbjct: 102 GMNLPMSLNLIKSEMMGTANWPWAMYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSG 161

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
           T             + LTE + GTD+  + ++    +DG Y ++G K F+S+   D    
Sbjct: 162 T-------------MCLTEAQCGTDLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTEN 208

Query: 242 -AFIMLAQV------EGRVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVEL 289
              I+LA++         +  F+VP+ L +        N +    +++K+G  S+AT  +
Sbjct: 209 IVHIVLARLPDAPAGTKGISLFIVPKFLPNADGEADKRNAVACGSIEHKMGITSSATCVI 268

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------ 343
            F    GFL+G+ N     +        + + I  ++ + +S   ++ YA+ R       
Sbjct: 269 NFDGATGFLIGEANKGLKAMFTYMNTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALS 328

Query: 344 ------VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYAR 394
                      +I    ++R +         A ++ +  A   D   EA ++ +E A  +
Sbjct: 329 GVKEPNQPADAIIHHADVRRMLLTQKAFAEGARSMIYHTARYADKLAEAVAKGDETAIKK 388

Query: 395 I------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                    PI K +  +++        +  GG GYI+E  +    R++   ++  G+  
Sbjct: 389 WDDKMGFFTPILKGFLTELSIEAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTG 448

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
              LD+L    LL  G        + + +  G     +   +R  + +  +       LT
Sbjct: 449 VQALDLLGRKVLLHGGGKAIRDYTAGIMKWCGEY--ALDKEMRKYVWVLTKLCAEWNMLT 506

Query: 506 EKIALAS 512
            ++ L +
Sbjct: 507 ARLLLTA 513


>gi|260206032|ref|ZP_05773523.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
 gi|289575421|ref|ZP_06455648.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
 gi|289539852|gb|EFD44430.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85]
          Length = 386

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/393 (19%), Positives = 138/393 (35%), Gaps = 29/393 (7%)

Query: 72  ELARMANYNTPQLHAY-GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           E           L  +  P  + W+K +       L   +   G         +      
Sbjct: 15  EHELFCESYRAFLDRHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNA 72

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              +           +         +   A  +  + T    + W P   + E       
Sbjct: 73  DFRYNTVITEETCAGRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE------- 125

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                 +   + +TE   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ
Sbjct: 126 ------LITAIAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQ 178

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
            +   G      L+ +    G    R  +KIG  +  T EL F++        L     G
Sbjct: 179 TDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMG 238

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +  M+ L    +  AIM+ +GM   L + + YA+ R   G  +      +  +A++A +
Sbjct: 239 FIYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATE 298

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 +           K  +E+AA A+        +  +    +    ++  GG GY+
Sbjct: 299 ATVVRIMVDEFIKLHLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYM 351

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  +AR Y +S   +I  G+   M   +   L
Sbjct: 352 REYPVARAYLDSRVQTIYGGTTEIMKEIIGRGL 384


>gi|323344864|ref|ZP_08085088.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269]
 gi|323094134|gb|EFZ36711.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269]
          Length = 575

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 153/414 (36%), Gaps = 40/414 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L  +   GL      R +  +          + +   A     ++ S        + 
Sbjct: 92  FENLDATRKAGLWGISMPRRYGGLNLPNTTFSMLSEVISAADSGFQNIWSLQSC-IDTLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
                   + + P+I + E               + + LTE   G+D+  +  +      
Sbjct: 151 EFGNEEQRQKYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKATFDEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +  + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G 
Sbjct: 197 ENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDGRGLSMFIYDKRNGGVDVRHIENKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L G+  +     V  +     L  A  SV   + +  EA+ YA+
Sbjct: 257 HGSPTCELVYKNAKAELCGNTRLGLIKYVMALMNGARLGIAAQSVGVEQEAYNEALAYAK 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--------------- 385
            R   G  +I+ P +   ++ +   + A  +L ++ A   D  K+               
Sbjct: 317 ERAQFGQKIINFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIQRDTKLIAEER 376

Query: 386 --RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +    A    P+ K    + A     +A+   GGSG+I E    R YR++   SI 
Sbjct: 377 DELKKYTRLADAFTPLAKGMNSEYASQAAYDAISIHGGSGFIMEYKSQRLYRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            G+    V+  +  +  GT L       + + LG+   + +T L+  ++   E 
Sbjct: 437 EGTTQLQVVAAIRYITNGTYL-----GIIREMLGNEVVESLTPLQTRVAKLAEQ 485


>gi|296284823|ref|ZP_06862821.1| acyl-CoA dehydrogenase family protein [Citromicrobium bathyomarinum
           JL354]
          Length = 580

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/500 (18%), Positives = 171/500 (34%), Gaps = 66/500 (13%)

Query: 49  NFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAWHA 105
              +    +L E + E V    A E A +              G + +   +     +  
Sbjct: 28  EHFAAAEPDLVEAIVEGVGQFAAGEWAPLNRKG-------DLEGAKLENGVIRLPDGFEE 80

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
             +  +  G +       +                   A      L   SV +   +A  
Sbjct: 81  AYQAYVEQGWNAIAGSAEYGGQGLPFTLACNVLENLGSANFAFNLLPMLSVGAIEALAAH 140

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T      + P + S ++  T             + LTE + G+D+ A+ +  Q I DG 
Sbjct: 141 GTDEQQARYLPDLISGKWSGT-------------MNLTESQAGSDVGALRTTAQPIEDGE 187

Query: 225 ---IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLED----------G 265
               Y + G K +++    +       ++LA++ G   G   +   L            G
Sbjct: 188 HAGKYRIKGQKIYITWGEHELAENIIHLVLARLPGAPEGSRGISLFLVPKYHLKDDGTPG 247

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           + N L    L++K+G  ++ T  + + +     G L+G  N     +  M     ++   
Sbjct: 248 AHNDLRCVSLEHKLGINASPTCVMSYGDNDECIGELVGAENRGLAAMFTMMNNARINVGS 307

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALS 373
             V     +  +A+ YA  R  S            ++D P ++R +  +     A   L 
Sbjct: 308 QGVQIAERATQQALAYALERVQSARAGAEDRTPVAIMDHPDVRRMLLRMRSLTEAMRGLL 367

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  A   D        A A A ++ P+ K W       V +  ++  GG G++EE   A+
Sbjct: 368 YYTAGQVDRGDIGDAAAKARAEVLVPMLKAWATDTGIEVASLGIQVHGGMGFVEETGAAQ 427

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           H+R++    I  G+       L    L  +   + + LF+ + +D G             
Sbjct: 428 HFRDARIAPIYEGTNGIQAADLVTRKLGLENGEVLQALFADIARDAGEEP--------QL 479

Query: 491 ISLCKEDKGLARFLTEKIAL 510
            +L  E   +AR++ E  +L
Sbjct: 480 QALAGECAAIARWMREDASL 499


>gi|159044299|ref|YP_001533093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
 gi|157912059|gb|ABV93492.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
          Length = 381

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 125/327 (38%), Gaps = 15/327 (4%)

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            V +++     +RL      EA  +  PSV +   +  M    +      K  S +    
Sbjct: 54  YVTEESGGSGLSRLDATLVFEALSMACPSVAAFLSIHNMCAAML-----DKFGSDDVKAR 108

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P           LTE   G+D AA+ ++ ++ ++G        +      SDA+I++
Sbjct: 109 FLPPALTMETVFSYCLTEPGSGSDAAALKTRAERTNEGYRLTGTKAFISGGGYSDAYIVM 168

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+  G  G   +  L+ +    GL +  L++K+G R+  T +++  +       LLG+  
Sbjct: 169 ART-GEDGPRGISSLIVEDGAPGLSFGGLEDKMGWRAQPTRQVQLDDCAVPAANLLGEEG 227

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         L+ A  S+   + +L   + Y   R   G  +     ++  +AD  
Sbjct: 228 AGFRYAMMGLDGGRLNIAACSLGAAQAALDATVAYMGERRAFGKPIDQFQALQFRLADAE 287

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +++ AA     + A   D+          A     + K +  +    V  + ++  GG G
Sbjct: 288 IELQAARVFLRQAAWKLDQGAPD------ATTHCAMAKKFVTEAGSRVADQCLQLHGGYG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450
           Y+ +  I +  R+   + IL G+   M
Sbjct: 342 YLADYGIEKLVRDLRVHQILEGTNEIM 368


>gi|62510496|sp|Q8HXY8|ACADM_MACFA RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|23574692|dbj|BAC20580.1| Medium-chain acyl-CoA dehydrogenase [Macaca fascicularis]
          Length = 421

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 122/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL      ++   +          +             +  +      + + 
Sbjct: 77  LIRRAWELGLMNPHIPQNCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 137 GNEQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   +  + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVL---KENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +LI+   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 413


>gi|224058541|ref|XP_002189528.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain [Taeniopygia guttata]
          Length = 423

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 117/360 (32%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL  S    S   +                        +  +      V + 
Sbjct: 79  LIKRAWELGLMNSHIPESCGGLGLGSFEACLITEELAYGCTGVQTAIEANSLGQMPVIIA 138

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K +  ++                       +TE   G+D+A I ++ +K  D  
Sbjct: 139 GNEHQQKKYLGRMTEEPMM-------------CAYCVTEPGAGSDVAGIKTKAEKKGDEY 185

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+                + +    G+   R +  +G R
Sbjct: 186 VINGQKMWITNGGKANWYFLLARTNPDPKAPASKAFTGFIVEADSPGIQVGRKEMNMGQR 245

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV        KI +          A  +V   + +L EA 
Sbjct: 246 CSDTRGIVFEDVRVP---KENVLIAEGAGFKIAMGAFDKTRPPVAAGAVGLAKRALDEAT 302

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 303 RYALERKTFGKPIVEHQAVSFLLAEMAMKVELARMAYQRAAWEVDAGRRNT-------YY 355

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  V A+A++  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 356 ASIAKAFAGDIANQVAADAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRMIIAR 415


>gi|190575063|ref|YP_001972908.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190012985|emb|CAQ46617.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 382

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/397 (20%), Positives = 152/397 (38%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  LQDVARRIAQEKIAPSAEHHDRTGE-------FPL--DNIRLLGENGLMGIEVPTEYGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                  + A      A      +MS  +    + +    T +  + +   I   E    
Sbjct: 63  GMDPVAYVLAMVEVAAADAAHSTIMSVNNSLFCNGILTHGTEQQKQTYVRAIAEGE---- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D  A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 119 ---------AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   L D    G    + + K+G R++AT E+EF++   ++    +V 
Sbjct: 170 FAMSEPDKGARGITAFLIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAQAEDVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  KI +  LD+  + ++   + +A A +     Y + R   G  +    + +  I
Sbjct: 227 GQEGEGFKIAMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + K  S EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWVKGQGKRFSTEAAVAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|114567004|ref|YP_754158.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337939|gb|ABI68787.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 382

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 118/373 (31%), Gaps = 27/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P      ++    GL        +                        
Sbjct: 26  PLAAEIDRTHEFPM--TTFKKMADLGLTGLPIPEEWGGAGASYLDFAMFVEELAKCCAST 83

Query: 149 GHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS       M   L  + RV + +   + + E             +     LTE   
Sbjct: 84  AVIMSVHTGLGCMSTYLYGSQRVKEKYLRALATGE-------------IVGAYALTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGS 266
           G+D A++  + +   D         +  +  ++  +    + +   G    +  L+ +  
Sbjct: 131 GSDAASLKCKAEDKGDYFLVNGSKIFITNGGVATTYCTFVKSDPSQGSGRGITCLVIEKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G   + TVEL F +       +LG++N        +     +  A  
Sbjct: 191 TPGFTMSKPVAKMGMNGSPTVELYFEDVKVPKENVLGEINDGFKVAMGLLAGGRVTIAAQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +L   + Y + R   G  L     ++  +AD+A  + AA  L +R A   D  
Sbjct: 251 GLGIGEGALDYTVQYIKERQQFGKPLAANQGVQFMVADMAAALDAAQLLVYRAAWLKDNG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              ++EA+ A+        +       V    ++ +GG GY  E  + R  R+     I 
Sbjct: 311 LPHNKEASMAKK-------FATDTGMEVCTNCVQLMGGYGYCNEFPVERMMRDVKITQIY 363

Query: 444 LGSGNAMVLDVLN 456
            GS     + +  
Sbjct: 364 EGSNQIQRMIIGR 376


>gi|154251533|ref|YP_001412357.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155483|gb|ABS62700.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 383

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 115/305 (37%), Gaps = 25/305 (8%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +       + W PKI S E             V +   LTE   G+D A++ +   + 
Sbjct: 97  IVMHGRQDQKEYWLPKIASGE-------------VIVSFALTEPEAGSDAASLKATAIRD 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D        ++  ++  + AF +LA+ + +  G   V   +      G+   + + K+G
Sbjct: 144 GDHYIVNGTKRYITNANKAHAFTLLARTDPKTPGAKGVSAFIVPRDIPGIHVGKPEKKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336
            +     ++ F +        L      G V  M++L    L  + + +      + +++
Sbjct: 204 QQGAHICDVIFEDARIPADCLLGDTEGRGFVTAMQVLERGRLHISAVCIGVADRLVEDSV 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  + +  +++  +AD  ++  A   +    A   D  +  + E+      
Sbjct: 264 KYAAERKQFGAPIGNLQLVQAMLADSKMEAYAGRCMVLDAARRRDAGEDVATES------ 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +C +    +   A++  GG+GY+ +  I R YR+     I  G+     + +  
Sbjct: 318 -SCCKLFCSEAVGRIADRAVQVHGGAGYVADYGIERFYRDVRIFRIYEGTSQVQQVIIAR 376

Query: 457 LLEKG 461
            L K 
Sbjct: 377 NLLKA 381


>gi|163787861|ref|ZP_02182308.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159877749|gb|EDP71806.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 388

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 138/353 (39%), Gaps = 17/353 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           I   +     D  +  +   + +  +     Y +  LE    ++    +A   A+     
Sbjct: 38  IERFIWKKFGDMGYFGLATPEDYGGLDLDLFYTVIFLEEMQRINSGGFAA---AMWAHAY 94

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +      K  + E       P         L +TE  GG+D+A + +   K  D  Y ++
Sbjct: 95  LAMTHLNKEGNHEQKEKYLTPSALGDAIGCLCITEPFGGSDVAGMRTTAVKKGD-SYIIN 153

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++ + SD  I+ A+    +G   +   + D    G+   +L +K+G R++ T E
Sbjct: 154 GSKTFITNGVYSDYLIVAAKTSPELGNKGISIFVMDRDTPGISATKL-DKLGWRASDTGE 212

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + F N       ++G+ N     +     L  L  A+ S +    +L  A  Y   R   
Sbjct: 213 IAFDNVEIPASNIMGEENQGFPYIMQHFALERLVMAVNSHARAEYALEYAKQYMSERTAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     ++   AD    +      ++ +A   D      +E       A ++K    
Sbjct: 273 GRTIDKFQALRHTYADCETQMEICKQFNYYVAKRLDMGDYVVKE-------ATMSKLQST 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           KMA  VI + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++
Sbjct: 326 KMADDVIYQCLQFLGGYGYMEEYPLARMARDSRLGPIGGGTSEILKEIIAKMV 378


>gi|73960161|ref|XP_547328.2| PREDICTED: similar to Acyl-CoA dehydrogenase, medium-chain
           specific, mitochondrial precursor (MCAD) [Canis
           familiaris]
          Length = 444

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 122/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL  +    S   +                        +  +      + + 
Sbjct: 100 LIKRAWELGLMNTHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPLIIA 159

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ +K  D  
Sbjct: 160 GNDQQQKKYLGRLT-------------EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEY 206

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 207 IINGQKMWITNGGKANWYFLLARSDPDPKTPAGKAFTGFIVEADTPGVQIGRKELNMGQR 266

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 267 CSDTRGIVFEDVKVP---KENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLGQRALDEAT 323

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 324 KYALERKTFGKLLVEHQGISFLLAEMAMKVELARMSYQRAAWEVDTGRRNT-------YF 376

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 377 ASIAKAYAADIANQLATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAR 436


>gi|94311466|ref|YP_584676.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355318|gb|ABF09407.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans
           CH34]
          Length = 378

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/354 (21%), Positives = 137/354 (38%), Gaps = 26/354 (7%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++  +GL C+     +        H    A     A +     +  S   A  +A + T 
Sbjct: 47  KAGREGLLCTALPTEYGGGGGDFGHAAIIAEEMAYAGVSVSFGLH-SDIVAPYIARLGTE 105

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P I +                 + + +TE  GG+D+ A  +   +  D  + +
Sbjct: 106 EQKQRWLPDICAG-------------KTILAVAITEPGGGSDVKACRTTAVRDGDE-WVI 151

Query: 229 SGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+S+   SD  +++ + +   G   V  +L + +  G    R  +K+G  S  T 
Sbjct: 152 NGSKTFISNGFCSDMVMVVCKTDPAAGARGVSLILVETNREGFRRGRKLHKVGMHSQDTA 211

Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F N     G LLG++N   G +           A+ + + +   L + I Y + R  
Sbjct: 212 ELFFDNVRVPAGNLLGEVNKGFGYLMHDLAQERFIIAVTAAAKIERLLEQTIEYVKDRKA 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            GG + D    K  +AD+  +  A   +           +   EEAA A++ A   ++ C
Sbjct: 272 FGGTVWDFQNTKFKLADVKANAVALRTMVDYYLGEHMRRRLSGEEAAIAKLHATEVQWKC 331

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  I + ++  GG GY+ E  IAR + +     +  GS   M   +   +
Sbjct: 332 -------IDDMVQLHGGYGYMLEYPIARAFVDMRVARVYGGSNEVMRDIITRKM 378


>gi|316932524|ref|YP_004107506.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600238|gb|ADU42773.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 381

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/416 (18%), Positives = 147/416 (35%), Gaps = 49/416 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF--HPAWHALLRR 109
             + +EL+   +      A++LA              P G++W K +     AW  L   
Sbjct: 6   PWMTEELDTFRDQFRKFLAKDLA--------------PHGDKWRKQKMVDRSAWLKL--- 48

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G         +  +    A+       +  +       +   S   A  +    + 
Sbjct: 49  -GEMGALLPSVPEEYGGLGASFAYDAAVYEDMETIVPDALSGVTVSSGIVAHYILNYGSE 107

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P +   E             +   + +TE   G+D+ ++ +  +   D  Y +
Sbjct: 108 EQKRRWLPGMARGE-------------LIGAIAMTEPGTGSDLQSVRTTAKLDGDD-YVI 153

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F+++    D  I++A+  G  G   +  ++ E     G    R  +KIG  ++ T
Sbjct: 154 NGQKTFITNGQNCDLIIVVART-GGAGAKGLSLIVLETKDNPGFKRGRNLDKIGLHASDT 212

Query: 287 VELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F N        L      G V+ M+ L    L  AI +V+ M  ++A    Y + R
Sbjct: 213 SELFFENARTPKANLLGGEEGKGFVQLMQQLPQERLIIAIGAVAAMERAVALTSEYTKDR 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +I+       +A+   +   A           D    +        + A + K+
Sbjct: 273 KAFGQPVIEFQNTAFTLAERKTEAFIARVFV-------DFCLVQLIAGNLDAVTASMAKW 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +     + E ++  GG GY++E  I R + +S    I  G+   M L +   L
Sbjct: 326 WTTQKQVETVDECLQLHGGYGYMQEYPIGRMFIDSRIQKIYGGTNEVMKLLIARSL 381


>gi|150376669|ref|YP_001313265.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150031216|gb|ABR63332.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 387

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 70/399 (17%), Positives = 141/399 (35%), Gaps = 28/399 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +  S     L               P  +  D+    P    L R     GL     D +
Sbjct: 8   FAFSEEIDALRESVRRFA--TERIAPLADEVDRKNAFPM--PLWREMGELGLLGITADEA 63

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    AH +    +   +        + S    + +    +P     + PK+ S E
Sbjct: 64  HGGAGLGYLAHCVAMEEISRASASVGLSYGAHSNLCVNQINRNGSPAQKSTYLPKLISGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                L ++E   G+D+ ++  +  K  D         W  + P +D 
Sbjct: 124 H-------------VGALAMSEPGSGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDADV 170

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   L + +  G    R  +K+G R + T EL F++        L
Sbjct: 171 LVVYAKTDPAAGPRGITAFLVENTFPGFSTGRKLDKLGMRGSNTSELIFTDCEVPQENVL 230

Query: 303 NVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                 V+ +   +  +  ++S   +  M   L   + Y   R   G  + +  +M+  +
Sbjct: 231 GALGEGVKVLMSGLDYERVVLSAGPLGIMAACLDVVVPYLHERKQFGQPIGEFQLMQGKL 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + + AA A  + +A + D  ++  ++AA           +  + A A+  EA++ +
Sbjct: 291 ADMYVRMNAARAYVYAVAAACDRGETARKDAAG-------CILYAAEAATALALEAIQAL 343

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+GY  +    R  R++    I  G+     + +   L
Sbjct: 344 GGNGYTNDFPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 382


>gi|71024205|ref|XP_762332.1| hypothetical protein UM06185.1 [Ustilago maydis 521]
 gi|46101856|gb|EAK87089.1| hypothetical protein UM06185.1 [Ustilago maydis 521]
          Length = 465

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 64/291 (21%), Positives = 125/291 (42%), Gaps = 13/291 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLS 236
           ++ ++      P           L+E   G+D  A+ +  +K  DG          W  +
Sbjct: 182 YASKHIQDKYLPQLSEKTLGSFCLSEPSSGSDAFAMKTSCKKSDDGKTWTLNGSKMWITN 241

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S  ++ FI+ AQ +   G   +     + S  G+   + + K+G R+++T  L F +   
Sbjct: 242 SAEAEFFIVFAQSDASKGYKGINAFAVEKSM-GVEIAKKEKKLGIRASSTCTLNFDDIKV 300

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G+         ++     +  A   +   + ++ +AI YA  R   G  +    
Sbjct: 301 PAENLIGEEGKGYKIAIEILNEGRVGIAAQMIGLAQGAVDKAIRYAADRKQFGKKITQFQ 360

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            M+  I+ I ++I AA  L++  A   +E +  ++EAA A       K +  ++A     
Sbjct: 361 GMQFQISQIMMEIEAARVLTYNAARLKEEGRPFTKEAAMA-------KLFASQVAQRASG 413

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            A+E  GG G+  E  I +++R+S   +I  G+ N M+  +  L+E+  +L
Sbjct: 414 SAIEWCGGVGFTRETGIEKYWRDSKIGAIYEGTSNIMLETIFKLVEREMDL 464


>gi|163743964|ref|ZP_02151334.1| Acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161382809|gb|EDQ07208.1| Acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
          Length = 383

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/418 (19%), Positives = 142/418 (33%), Gaps = 43/418 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
                S +  E ++L +       +E A       P+   +   G   D+        + 
Sbjct: 3   AEQHSSWMTDEHQMLADMTAQFITREWA-------PKFETWRKQGM-MDR--------ST 46

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
              +   GL C      +  V     H+         A L +      S   A  V    
Sbjct: 47  WNEAGALGLLCPSVPEEYGGVGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYVLAYG 106

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK+ + E             +   L +TE   G+D+  I ++  K  +  Y
Sbjct: 107 TEEQKQRWLPKMITGE-------------LVGALAMTEPSTGSDVQRIKTKAVKDGNA-Y 152

Query: 227 CLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSN 284
            LSG K F+++      I + A+ +   G   +  + +E    +G    R  +KIG  + 
Sbjct: 153 RLSGQKTFITNGQHANLILVAAKTDPSQGSKGISLVAVETDGADGFSRGRNLDKIGLHAA 212

Query: 285 ATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
            T EL F N        L      G  + M+ L    L  A  +V  M  ++   I Y +
Sbjct: 213 DTSELFFDNVEIAPENILGGTEGQGFYQMMQQLPQERLIIACGAVGAMEGAVERTITYCK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG L      +  + +       A A         DE      +       A + 
Sbjct: 273 EREAFGGPLTQFQNTRFKLVECQTKTKVARAF-------LDECMVEHLQGKLTVEKAAMA 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           KYW       V+ E ++  GG G+++E ++A  + ++    I  G+   M   +   L
Sbjct: 326 KYWITDTQGDVLDECVQLHGGYGFMQEYAVAEMWTDARVQRIYGGTNEIMKELIARSL 383


>gi|116695276|ref|YP_840852.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529775|emb|CAJ96122.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 521

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/454 (18%), Positives = 176/454 (38%), Gaps = 53/454 (11%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    ++    G       + F      +   I  A   ++        + P +T 
Sbjct: 3   TTPGFKPAFQQFAQGGWQGIQHSQQFGGQGLPK--LIATACHEMLHSANLSFALCPMLTD 60

Query: 159 ASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            ++ AL+T  +      + PK+ S E+  T             + LTE + G+D+AA+ +
Sbjct: 61  GAIEALLTAGSDAQKATFLPKLISGEWTGT-------------MNLTEPQAGSDLAAVRT 107

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGCFLVPRLLED- 264
           + +   DG Y + G K F++    D       ++LA+          +  F+VP+ L + 
Sbjct: 108 RAEPQGDGTYKVFGTKIFITYGEHDMAQNIVHLVLARTPNAPEGVKGISLFIVPKFLVND 167

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
               G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +  M     
Sbjct: 168 DGSTGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSAR 227

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAA 368
               +  ++    +  +A+ +AR R  S            +I  P +KR +  +      
Sbjct: 228 FSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALTEG 287

Query: 369 ATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A A+++  A + D A    +EA      A+   M P+ K W  +++  V +  ++  GG 
Sbjct: 288 ARAVAYVAAAASDAAHQHPDEAVRGQSQAFYEFMVPVVKGWSTELSIDVTSLGVQVHGGM 347

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+IEE   A+HYR++    I  G+       L     +  G  +   + + + +   + G
Sbjct: 348 GFIEETGAAQHYRDARILPIYEGTTAIQANDLVGRKTVRDGGAVARAICAQIVETEAALG 407

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
           +          +     +     + E +   + A
Sbjct: 408 QHGGAAFTAVQAQLARGRAALEAVVEFVVANAKA 441


>gi|16124682|ref|NP_419246.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|221233375|ref|YP_002515811.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13421592|gb|AAK22414.1| acyl-CoA dehydrogenase, putative [Caulobacter crescentus CB15]
 gi|220962547|gb|ACL93903.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter
           crescentus NA1000]
          Length = 382

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 121/355 (34%), Gaps = 25/355 (7%)

Query: 114 GLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        F  +    +   + A  L   +        +     +  + +        
Sbjct: 48  GLFGLTIPEEFGGLGLTMEEEALVAIELGRASPAFRSVFGTNVGIGSQGLVMFGNDEQKA 107

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P I S              +V     LTE   G+D AA+ ++  +  D        +
Sbjct: 108 KWLPGIASG-------------AVITSFALTEPEAGSDSAAVQTRATRDGDDYILNGSKR 154

Query: 233 WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +  ++  +  F ++A+      G   V   L      GL   + + K+G +     ++ F
Sbjct: 155 YITNAGKASLFTVMARTNPDAKGGAGVSAFLVPRDLPGLTVGKPEKKMGQQGAHIHDVTF 214

Query: 292 SNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N        L     G    M++L    L  A + V      +A+ + YA  R   G  
Sbjct: 215 DNVRVPAWNRLGAEGEGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYASERKQFGQP 274

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    +++  IAD   +  AA AL    A   D   + + EAA        +K +  +M 
Sbjct: 275 IASFQLIQAMIADSKTEALAAKALVLETARKRDAGVNVTLEAA-------SSKLFASEMV 327

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             V   A++  GG+GY+ +  I R YR+     I  G+     L +     K   
Sbjct: 328 GRVADRAVQVFGGAGYVADYGIERLYRDVRIFRIYEGTSQVQQLIIARETLKRGG 382


>gi|313217249|emb|CBY38391.1| unnamed protein product [Oikopleura dioica]
          Length = 395

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 128/373 (34%), Gaps = 26/373 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGH 150
              D+ +  P +     +    G+  ++    F           +    L  ++      
Sbjct: 32  REIDETDSFPEYREFWLKCGEQGVLGTLSAEEFGGTGMGLFETSLMLEELSRISGGVYMG 91

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +  S+ ++    T      + P + S                   L ++E   G+D
Sbjct: 92  IFAHTCLSSYVIERNGTAEQKAKFLPGLVSG-------------QTIGALAMSEPGSGSD 138

Query: 211 IAAITSQGQKI-SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED-GS 266
           + ++  Q  K      Y ++G K W  + P+ D  ++ A+ +    G   +     D   
Sbjct: 139 VMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSKSITAFAIDVRE 198

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G     +  K+G R + T EL F N       +LG        +     +  L  A  
Sbjct: 199 LEGFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGVEGKGAAVLMKGLNVERLTGAAG 258

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++A  A  + L  + D+ 
Sbjct: 259 AVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLSATRAYLYALLKAADK- 317

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++             +  + A  V  EA++ +GG+GY       R  R+     I 
Sbjct: 318 ----DQKTLTNHDCAAVLMYGAEQATKVSLEAIQILGGNGYTNAYPAERIMRDCKIGEIG 373

Query: 444 LGSGNAMVLDVLN 456
            G+     L +  
Sbjct: 374 AGTTEVRKLILGR 386


>gi|126462554|ref|YP_001043668.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104218|gb|ABN76896.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 379

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 138/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q +  MA     +     P    W++    P    L  +    GL       
Sbjct: 2   DFALSEEQQAIFDMARAFGAE--EIAPHARAWEEAGTIP--RTLWPKVAELGLGGVYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S     A M+    +  +   W P I    
Sbjct: 58  EHGGSGLGRLDATLVFEALAMACPSVAAFLSIHNMCAGMIDRYGSEELKARWLPGIC--- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                       +  +   LTE   G+D AA+ ++     +G Y LSG K F+S    SD
Sbjct: 115 ----------ALTTLVSYCLTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           A++ + +  G  G   +  LL      GL +  L++K+G R+  T +++F         L
Sbjct: 164 AYLTMCRT-GGAGPKGISTLLVPAGTPGLSFGGLEDKMGWRAQETRQVQFDECLVPTDLL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  ++ G + +      Y   R   G  L     ++  
Sbjct: 223 VGEEGRGFAYAMAGLDGGRLNIAATALGGAQAAFDATRAYMAERKAFGQRLDGFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ + +  A     + A   D+          A     + K      A  V  + ++ 
Sbjct: 283 LAEMEVKLQQARIFLRQAAWKLDQGAPD------ATKFCAMAKLAVTDSAFEVANQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + V   L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|148656963|ref|YP_001277168.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569073|gb|ABQ91218.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 381

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 140/376 (37%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLE 147
           P    W++V   P    L + +   G  C      +     +           L  A   
Sbjct: 27  PFHAEWERVGAVP--RDLWQAAGRQGFLCMDVPEEYGGASARDYRFNVVIGEELWRAGAT 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +      +    TP   + W P+  S E                 + +TE   
Sbjct: 85  GPGFVLHTDIVVPYITHYGTPDQRRRWLPRCVSGEC-------------ITAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+AAI +   +  D +Y L+G K F+S+ + +D  I+ A+     G   +  L+ +  
Sbjct: 132 GSDLAAIRTTALRDGD-VYLLNGQKTFISNGILNDLVIVAAKTNPEAGHKGISLLVVERD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG  +  T EL F N       LLG+       + +      L  A+ 
Sbjct: 191 MPGYERGRRLEKIGLHAQDTAELFFHNVRVPRDHLLGEEGQGFRYLMEQLPRERLAIAVG 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+   V+L + I Y R R   G  +     ++  +A++  ++        +   + +  
Sbjct: 251 AVAAAEVALEQTIRYCREREAFGRPIGALQSVRFTLAELVTEVQIGRVFVDQCVLALNRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +E AA A+        W  ++   V+   ++  GG GY+ E  IAR + ++   +I 
Sbjct: 311 ELTAETAAMAKW-------WTTELQQRVVHACLQLHGGYGYMREYPIARAFLDARVQTIY 363

Query: 444 LGSGNAMVLDVLNLLE 459
            G+   M   +   L+
Sbjct: 364 GGTTEIMKEIIGRSLK 379


>gi|167579313|ref|ZP_02372187.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 378

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++        + I        A    
Sbjct: 28  PHHERWEEQGYVD--RDVWTKAAEAGYHCASMPEAYGGAGADIRYSIVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +       +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGDDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW  ++   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|149922652|ref|ZP_01911079.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica
           SIR-1]
 gi|149816449|gb|EDM75948.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica
           SIR-1]
          Length = 384

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 123/363 (33%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C   +  +        H    +     A      +   S      + 
Sbjct: 40  REAWLQAGEAGLLCPWIEEEYGGPGGDFLHSTIVSEELSRAYESGFAIPLHSDIVVPYIH 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QK 220
              +    K W P   S E             +   + +TE   G+D+A + +     ++
Sbjct: 100 SFGSAEQKKRWLPGCVSGE-------------LITAIAMTEPNTGSDLAGLEATAKKIER 146

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             +  Y L+G K F+S+ M  D  ++ A+ E        V   + +    G    +   K
Sbjct: 147 DGETRYVLNGSKTFISNGMLCDLCLVAAKTENSEDPHRNVSLFVVEAGTPGFVKAKKLAK 206

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G  S  T EL F +        +     G +  M  L    L  AIM  +     LA+ 
Sbjct: 207 MGLASQDTAELAFEDCEIPEANRIGPEGAGFMMLMNKLQQERLVVAIMCQASAEQVLADT 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y   R   G  +      +  +AD A ++           +  D    R  +  Y   
Sbjct: 267 LKYVGEREAFGRPIGKFQNTRFKLADCATEVEVGR-------HFLDAVVRRHAKGEYLVK 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K W  +M   V+ E ++  GG GY+ E  I+R Y ++    I  G+   M + + 
Sbjct: 320 ECSMAKLWQSEMLCRVVDECLQFFGGYGYMLEYPISRAYMDARVQRIYAGTNEIMKVIIA 379

Query: 456 NLL 458
             L
Sbjct: 380 KQL 382


>gi|148263656|ref|YP_001230362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146397156|gb|ABQ25789.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 592

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/472 (18%), Positives = 168/472 (35%), Gaps = 37/472 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+++    GL        +  +   +A  + AA     A   +    + +      +  
Sbjct: 63  ELMQKCGELGLLMIDAPEEYGGLELDKATSMLAAEKISSAGSFSVAYSAHTGIGTLPLVY 122

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + +  KI S E+                  LTE   G+D     +     +DG
Sbjct: 123 YGTTEQKEKYLGKIISGEW-------------VAAYCLTEPDSGSDALGAKTTATLSADG 169

Query: 225 -IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++   ++ + + A+++           L + +  GL     + K+G +
Sbjct: 170 KYYLLNGTKQFITNGSFANLYTIFAKIDKEH----FTAFLVERTTEGLSVGAEEQKLGIK 225

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++   N    +   LG++        ++  +             + +LAE I YA
Sbjct: 226 GSSTTQIILENAKVPVENVLGEIGKGHKIAFNVLNVGRFKLGAGVTGAAKYALAEGIRYA 285

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------------RS 387
             R   G  +     +K  IA+++  + AA +L +RLA   D   +              
Sbjct: 286 NMRKQFGVPIGTFGAIKEKIANLSAAVFAAESLVYRLAGLIDHKLATIPKDTSNYYDVYQ 345

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +      I   I K +C ++   V+ E ++  GG G+I+E      YR+   N I  G+ 
Sbjct: 346 KGIEEYAIECAIAKVFCSEVLSDVVDEVVQIHGGYGFIQEYPAEGFYRDERINRIFEGTN 405

Query: 448 NAMVLDVLN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
               L +   LL +       L   + + L +        + DS+    E   L      
Sbjct: 406 EINRLLIPGILLGRAMKGEIPLQREVMKALEALMTPSFDEIDDSVPFAAEKVLLQNLKKA 465

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
            + LA SA   Y   + D  ++ +     D   +   +      A  I+ +L
Sbjct: 466 FLVLAGSAVQKYMDKIKDEQEILMA--VADVAINIFALESAVLRAEKILGTL 515


>gi|307180055|gb|EFN68131.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 638

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 89/471 (18%), Positives = 173/471 (36%), Gaps = 55/471 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
                    G       + F  +        R   +     L     L +        + 
Sbjct: 116 KTAAALWELGGFALQVPQEFGGLGLTNTQYSRVVEICGYHDLGLGIMLGAHQSIGFKGIL 175

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + P++ + EY                  LTE   G+D ++I S+  K +D
Sbjct: 176 LYGTPEQKAKYLPRVSNGEY--------------AAFCLTEPGAGSDASSIRSRAIKSAD 221

Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
           G  Y L+G K ++S+  ++    + AQV   + + G     +   + +    G+     +
Sbjct: 222 GSHYVLNGSKIWISNGGIASIMTVFAQVPFKDPKTGETKEKITAFVVEREFGGVTSGPPE 281

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRV 330
            K+G + + T E+ F +         NV     E  K+ +  L++    +S      MR 
Sbjct: 282 KKMGIKCSNTAEVFFEDVKIPA---ENVLGKEGEGFKVAMNILNNGRFGMSACLSGTMRY 338

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEE 389
            + +A+ +A +R   G  L +   ++  +A + +      +L++ L+ + D   +    E
Sbjct: 339 CINKAVSHATQRKQFGRTLNNYGTIQEKLARMVMLHYITESLAYALSGNMDLGSQDYHLE 398

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA       I+K +  + A  V  E+++ +GG G++ E  + R  R+     I  G+ + 
Sbjct: 399 AA-------ISKCFASESAWLVCDESIQILGGMGFMSETGLERVMRDLRIFRIFEGTNDI 451

Query: 450 MVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKED---KGLAR 502
           + L V    +   G++L   ++ F     +LG   ++       +I L         +  
Sbjct: 452 LRLFVALTGIQYAGSHLKELQKAFKNPTANLGLIFEEATKRATRAIGLRSLPTFGDSVHP 511

Query: 503 FLTEKIALASSAAA---------LYRAGMNDIADVFLENRFLDNCHSTHCM 544
            L E  AL S +           L + G   + + F+ NR          M
Sbjct: 512 RLAESAALCSKSVETFGQVIENTLIKYGRGVVEEQFILNRIAQAAFDACTM 562


>gi|209515322|ref|ZP_03264189.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504303|gb|EEA04292.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 377

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 133/376 (35%), Gaps = 34/376 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    PA   ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRDGQLPA--DVVTQMGELGFLGMIVPSEWGGSYSDYIAYAIALEEIAAGCAAC 83

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             LMS   +     +    T      +   + +                     LTE + 
Sbjct: 84  ATLMSVHNSVGCGPILNFGTEAQKDHYLADLATG-------------KRIGAFCLTEPQA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++     DG + L+G K F+++   +   I+ A  +   G   +   +    
Sbjct: 131 GSEANNLRTRAVPR-DGQWILNGSKQFVTNGARASIAIVFAVTDPDAGKRGISAFIVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    R +NK+G R++ T  +   +     + + N+     E ++I L  L+   + +
Sbjct: 190 TPGFNVGRPENKLGIRASDTCPISLDDC---AIPEANLLGARGEGLRIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +       A  YA  R   G +L +   +   +AD+A  + A   L    A   
Sbjct: 247 AAQAIGIARAAFDAARAYANERIQFGKLLKEHQTIANMLADMATRLNAGRLLVHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +    E       A   K +  ++A  V ++A++  GG GY+E+ ++ RHYR++   
Sbjct: 307 SAGRPCLSE-------ASQAKLYASELAEEVCSKAVQIHGGYGYLEDYAVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+     + +  
Sbjct: 360 QIYEGTSEVQRMVIAR 375


>gi|119610653|gb|EAW90247.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_b [Homo
           sapiens]
          Length = 701

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 235 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 281

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 282 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 341

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 342 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 398

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 399 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 453

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 454 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 512

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 513 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 571

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 572 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 625


>gi|111027010|ref|YP_708988.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825549|gb|ABH00830.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 387

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 131/361 (36%), Gaps = 22/361 (6%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           F PA   +L  S   GL        +        H+             A   ++    +
Sbjct: 38  FSPAIREILAESGFFGLVVKP---EYGGAESDIRHQSIVLEEIARVYPSACTYLTAHWLA 94

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
             ++AL  T      W   +  +                  + +TE   G+D+  +T++ 
Sbjct: 95  TKIIALNATGPSEAPWVKPLLEQ---------AAAGEKLGAIAVTEPEAGSDLGNVTTRA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           ++  D        ++  +   +D + +LA+  G  G   +     +    G+   R + K
Sbjct: 146 RRDGDEWVIQGTKRFITNGGFADFYSVLART-GGPGARGLSMFFVEADRPGVRAARWEQK 204

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G   +AT E+ F         L+G+ +     +        L  A M +   + +L  A
Sbjct: 205 MGLHGSATAEMHFDEVRVPADHLIGEADKGFTHLMRGFDEGRLGVAAMCLGISQGALDAA 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R   G  +     ++  IAD+A+ + ++ +L +  AN+F      S        
Sbjct: 265 TRYASERKQFGKEIAGYQGVQFLIADMAIGVHSSRSLVYDAANAFVNKHPDS------SR 318

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A + K +   ++  V   A++  GGSGY+ +  +    R++    I  G+   + + + 
Sbjct: 319 LAAMAKTYSSDVSMEVTTNAVQVHGGSGYVRDFPVEMFMRDAKIGQIYEGTNQILRMLIA 378

Query: 456 N 456
            
Sbjct: 379 R 379


>gi|299069007|emb|CBJ40255.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 377

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 132/380 (34%), Gaps = 34/380 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+    P    ++ +    GL   +    +            A       
Sbjct: 22  ERLAPHAAQWDRDSSLPDH--VVAQMGELGLLGMMVPPEWGGSYTDYIAYALALEEIAAG 79

Query: 145 QLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +MS   +     +    T      + P + +                     LT
Sbjct: 80  CAACATMMSVHNSVGCGPILNFGTDAQKARYLPDLATG-------------RAIGAFCLT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G++   + ++     DG + L+G K F+++   +   I+ A  +   G   +   +
Sbjct: 127 EPHAGSEANNLRTRAVPR-DGHWVLTGSKQFVTNGARAQLAIVFAVTDPGAGKRGISAFI 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSA 321
                 G    R ++K+G R++ T  +   +       + N+   P E +KI L  L+  
Sbjct: 186 VPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVP---EANLLGEPGEGLKIALSNLEGG 242

Query: 322 IMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   V +       A  YA  R   G  L +   +   +AD+A  + AA  L    
Sbjct: 243 RIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIANMLADMATRLNAARLLVHHA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A      K    E       A   K +  ++A  + ++A++  GG GY+ + ++ RHYR+
Sbjct: 303 ARLRSADKPCLSE-------ASQAKLYASELAEEICSKAIQIHGGYGYLTDYAVERHYRD 355

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +    I  G+     + +  
Sbjct: 356 ARITQIYEGTSEVQRMVIAR 375


>gi|292494885|ref|NP_058682.2| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rattus norvegicus]
 gi|149026289|gb|EDL82532.1| acetyl-Coenzyme A dehydrogenase, medium chain [Rattus norvegicus]
          Length = 421

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 119/362 (32%), Gaps = 32/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++R+   GL  +    S   +                        +  +      V 
Sbjct: 75  FPLIKRAWELGLINTHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVI 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +    +  K +  ++              +  +     +TE   G+D+A I ++ +K  D
Sbjct: 135 IAGNDQQKKKYLGRMT-------------EQLMMCAYCVTEPSAGSDVAGIKTKAEKKGD 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  +   ++ + +L +                + +    G+   + +  +G
Sbjct: 182 EYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMG 241

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R + T  + F +         NV  G     KI +          A  +V   + +L E
Sbjct: 242 QRCSDTRGITFEDVRVP---KENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +       
Sbjct: 299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNT------- 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K +   +A  +  +A++  GG G+  E  + +  R++    I  G+     L +
Sbjct: 352 YFASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLII 411

Query: 455 LN 456
             
Sbjct: 412 AR 413


>gi|291009013|ref|ZP_06566986.1| acyl-CoA dehydrogenase domain-containing protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 360

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 126/348 (36%), Gaps = 30/348 (8%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +    +     ++       A +  G  +S    +   +A   T    + W P +
Sbjct: 36  PYPEQYGGGEQPYEVYLQVLEEISRAWMTVGVGLSVHTMACFPLAHFGTDGQREKWLPDM 95

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                               G  L+E   G+D AA++++  +  D         W     
Sbjct: 96  IGG-------------RTLGGYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGG 142

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D + ++A+     G   +  LL DG+  GL     ++K+G   + T EL F       
Sbjct: 143 VADFYTLMARTSDD-GPRGISCLLVDGTTPGLSAGTPEHKMGLTGSPTTELRFDGARVPA 201

Query: 299 LGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +     + +KI +       L  A  +V   + +L  A+ YA++R   G  +I+ 
Sbjct: 202 ---ERLVGAEGDGLKIALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEF 258

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A  + +A A     A   D             + A + K      A  V 
Sbjct: 259 QGLEFLLADMAAVVHSARATYLDGARRRDAGMPFG-------MQASVAKLVATDAAMKVT 311

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++ +GG GY  +    R+ RE+    I  G+     + +   L K
Sbjct: 312 TDAVQVLGGVGYTRDFPAERYMREAKVLQIFEGTNQIQRMLIGRHLAK 359


>gi|307296036|ref|ZP_07575867.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878207|gb|EFN09429.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 386

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 131/363 (36%), Gaps = 27/363 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            +++     G+        +  +    + +I        +      ++  ++   S  + 
Sbjct: 39  EVIQDFRDMGIFGLTTPERYGGLGLASSEEIEIIMEMCWSSAAFRSVVGINLGLGSQGIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T      W P++ S E             V     LTE   G+D AA+ ++  +  D
Sbjct: 99  MDGTEEQRDYWLPRMASGE-------------VITSFCLTEPDSGSDSAALQTRAVRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                   ++  ++P++  F+++A+           V   L      G+   +   K+G 
Sbjct: 146 DYILNGTKRFITNAPIAGLFLVMARTHPERLPKNAHVTAFLVPADTPGVRLGKKDRKMGQ 205

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
               + ++   +        +      G    MK L    ++ + + +   R  L EA  
Sbjct: 206 SGAWSSDVYLEDVRVPASAIVGGVEGKGFGTAMKSLDRGRINVSSVCIGQARRILHEATK 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   D+ AA  +   +A  +D  +  S E       A
Sbjct: 266 YAVERKQFGQPIGEFQLIQAMLADSRADLYAAECMLRDVARRYDSGERVSLE-------A 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             TK +  +M   +   A++  GG+GY+ + ++ R YR+     I  G+       +   
Sbjct: 319 SCTKMFASEMVGRIADRAVQIHGGAGYMRDSAVERFYRDVRVFRIYEGTTQIQQTIIGKE 378

Query: 458 LEK 460
           L +
Sbjct: 379 LIR 381


>gi|254483196|ref|ZP_05096429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036567|gb|EEB77241.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 383

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 151/383 (39%), Gaps = 24/383 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E W+     PA H + +++ + GL        +  +    ++        L+A
Sbjct: 20  KEINPFVEEWENAGIFPA-HEVFKKAGNLGLLGIHKPEEYGGLGLDYSYA-------LVA 71

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           Q E G     SV  +  V   M TP + +       S E       P     +   +G++
Sbjct: 72  QEEWGSASHGSVPLSIAVQTDMATPALARFG-----SDELKRNFLTPAIAGDMVTSIGVS 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+AAI +   K  D         W  +S  +D   +LA             ++ 
Sbjct: 127 EPHAGSDVAAIKTTAIKRGDDYVINGTKMWITNSTQADYICLLANTSDDQKHVNKSLIIV 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
                G     L NK+G R++ T +L F +      +L+G+                +  
Sbjct: 187 PTDVPGFSTSSLLNKLGMRASDTAQLFFDDVVVPQRYLIGEEGKGFTYQMMQFQEERIAG 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +++ G+   + E I Y  +R   G  L++  ++   +A++ ++I +  AL++R   ++
Sbjct: 247 SAITIKGLENCINETIEYTSQRQAFGKPLLNNQIVNMKLAEMQMEIESLRALTYRACETY 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 +  A+YA++ A        K+  ++  E ++  GG GY+ +  + R  R+    
Sbjct: 307 INGGDPTLLASYAKLKAG-------KLCNSIPTECLQFWGGMGYMWDNPVGRAMRDMRLT 359

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
           SI  G+   M+  +  ++  GT 
Sbjct: 360 SIGGGADEVMLGIIGKMMGLGTQ 382


>gi|262372427|ref|ZP_06065706.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262312452|gb|EEY93537.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 381

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 135/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA--QL 146
           P  ++W++    P   ++      +G  C      +        + +        A    
Sbjct: 25  PHYDQWEREGIMP--RSVWNLLGENGFLCVDVPEEYGGYGVPTHYSLMLVEESARAGYCA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            +  +   S  +A  +  + T    + W PK+ S E                 +G+TE  
Sbjct: 83  LSTAISCHSEIAAPYIQHIGTEEQKQYWLPKMVSGE-------------AVGAIGMTEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+ A+ +      D  Y L+G K F+S+      ++LA + + +     V  LL D 
Sbjct: 130 AGSDLQAMRTSAILQGDH-YILNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDT 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIM- 323
              G       +KIG  S  T EL F N        L N  +G    M+ L    +AI  
Sbjct: 189 HLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKDQLLGNAGSGFAYLMQELPRERTAIAS 248

Query: 324 -SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++  +R ++  A  Y + R   G  +      +  +A   +D  A  A   +    + E
Sbjct: 249 TALGAIRGAIDLATAYVKERQAFGQAISQFQNTRFVLAQAKIDELATAAFYNQNVELYME 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++    I
Sbjct: 309 GKLDVETAA-------ALKSFSTDMQMKVSDNLLQLFGGYGYMTEYPISRFFVDARIQRI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 362 YGGTNEIMKEIVARGL 377


>gi|111019862|ref|YP_702834.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819392|gb|ABG94676.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 137/373 (36%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +           +  +      +     M     
Sbjct: 35  EYPEKWIEQMK---QIGIYGLAVPEEYGGSPVSMPCYAQVTQELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T    + + PK+ + E   T             + LTE  GG+D+ A+++ 
Sbjct: 92  VAKLLSLYGTEEQKRQYLPKLATGEIRAT-------------MALTEPGGGSDLQAMSTN 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +   D +       W  ++  S    +L + +         +  +L +  P GL   R 
Sbjct: 139 AKTDGDDLVISGSKTWISNARRSGLIALLCKTDPAASPKHKGISIVLVEHGP-GLTVSRD 197

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   T EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 198 LPKLGYKGVETCELSFDNYRISSDAVLGGTAGKGFAQMMKGLETGRIQVACRALGVATAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D       EA 
Sbjct: 258 LEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDSGDRCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLYASEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLLEKGTNL 464
             +++ L     L
Sbjct: 371 NVIVSQLVSRGGL 383


>gi|332261789|ref|XP_003279949.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 498

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 156/439 (35%), Gaps = 52/439 (11%)

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           R   +  M       L +        + L  T      + PK+ S E+            
Sbjct: 4   RLGEIISMDGSITVTLAAHQANGLKGIVLAGTEEQKAKYLPKLASGEH------------ 51

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---- 249
                 LTE   G+D A+I S+     D   Y L+G K W  +  +++ F + A+     
Sbjct: 52  -IAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVD 110

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +G V    +   + +    G+   + ++K+G R + T E+ F NT   +    N+    
Sbjct: 111 SDGSVKDK-ITAFIVERDFGGVTNGKPEDKLGIRGSNTCEVHFENTKVPV---ENILGEV 166

Query: 309 VEDMKILIY-LDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            +  K+ +  L+S   S+  +   L          YA  R      L +  +++   A +
Sbjct: 167 GDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALM 226

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A       ++++  A   D+            I A + K +  + A   ++EA++ +GG 
Sbjct: 227 AQKAYVMESMTYLTAGMLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGL 281

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSG 480
           GY  +    R  R++    I  G+   + + + L  L+    +       L+Q  + +  
Sbjct: 282 GYTRDYPYERILRDTRILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQAKVSTVM 341

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSA---------------AALYRAGMNDI 525
             +   LRDS+    +            +LA SA                 L R G   +
Sbjct: 342 DTIGRRLRDSLGRTVDLGLTGNRGVVHPSLADSANKFEENTYYFGKTVETLLLRFGKTIM 401

Query: 526 ADVFLENRFLDNCHSTHCM 544
            +  +  R  +   + + M
Sbjct: 402 EEQLVLKRLANILINLYGM 420


>gi|260187740|ref|ZP_05765214.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
 gi|289448379|ref|ZP_06438123.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
 gi|289421337|gb|EFD18538.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A]
          Length = 386

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 136/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +     +    
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITKETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|51894146|ref|YP_076837.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863]
 gi|51857835|dbj|BAD41993.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863]
          Length = 589

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/461 (17%), Positives = 162/461 (35%), Gaps = 52/461 (11%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +  +   +     A   Y  A   A  + + +   +  +    TP     + PK+ +
Sbjct: 81  PEEYGGMGLDKVTATVATEEYSRAGSFAITIGAHTGIGSLPIVYFGTPEQKAKYLPKLAT 140

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY--CLSGHKWFLSSP 238
            E+                  LTE   G+D     +  +   DG Y       +W  ++ 
Sbjct: 141 GEW-------------VAAYALTEPNAGSDALGARTTARLSEDGKYWILNGTKQWITNAG 187

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D F++ A+V+G          + + +  G+     + K+G  +++T  L   +    +
Sbjct: 188 FADVFVVYAKVDGEK----FSAFIVERNFPGVSIGPEEKKMGLHASSTCSLILEDAKVPV 243

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L  +  G V    IL          +V   ++ LA +I YA+ R   G  + +   +
Sbjct: 244 ENLLGEIGKGHVIAFNILNIGRWKLGAGTVGSSKMVLATSIEYAKTRKQFGKPIAELRAI 303

Query: 356 KRAIADIALDIAAATALSFRLANS-------------FDEAKSRSEEAAYARIMAPITKY 402
           ++ +AD+A+      ++ +R A                 E   R EE A       I K 
Sbjct: 304 QQKLADMAVRTYVTESMGYRTAGLLDSSLSDLDPNADMREVGKRLEEYAM---ECSIMKV 360

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV----LNLL 458
           +  +    V  E ++  GG G+++E +++  YR+S  N I  G+     L +    +   
Sbjct: 361 FGSEAFDFVADEGVQIHGGYGFMDEYAVSMAYRDSRINRIFEGTNEINRLLIPGTLVRRA 420

Query: 459 EKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
            KG     Q  + L+ +L S    ++    L   + +       AR +   + LA     
Sbjct: 421 MKGQLPIMQAMAGLQDELMSLTPYEESDEPLAQELFMID----RARKV--FLMLAGLGVQ 474

Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
            Y+  +    ++ L     D     + M      A   +  
Sbjct: 475 KYQMALEHEQELLLG--VADIAIEIYAMESAVLRALKAVKR 513


>gi|302187962|ref|ZP_07264635.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae 642]
          Length = 383

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPYAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A           G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAVDAATGTLMSVHSSVGCGPVLNYGTDEQKHAWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPSLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I AA  L+   A      ++   E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINAARLLTLHAARLRSAGQACLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|254387925|ref|ZP_05003162.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294817475|ref|ZP_06776117.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326446194|ref|ZP_08220928.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|197701649|gb|EDY47461.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322290|gb|EFG04425.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 382

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 139/380 (36%), Gaps = 27/380 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +A  +          
Sbjct: 24  HLAPHALDWDRDKHFPV--DVLRKAAGLGLGGVYVGEESGGSGLSRADGVLVFETLATGC 81

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+     P       P++ S                     LTE 
Sbjct: 82  PSIAGYLSIHNMVAWMIDHYGDPAQRDRRLPRLCSM-------------DDLASYCLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA+ ++  +  +G + LSG K F+S   +   ++++A+  G  G   V   L +
Sbjct: 129 GAGSDAAALATRAVRDGEG-WVLSGVKQFISGAGASQLYVVMARTGGE-GAAGVSAFLVE 186

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T ++           LLG          +      L  A
Sbjct: 187 KDDPGVGFGPDERKMGWNAQPTRQVVLDGVRLPADRLLGREGEGFRIAMNGLNGGRLGIA 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL  + A + D
Sbjct: 247 ACSLGGARSALDRSLTHLADREAFGRRLLDADALRFRLADMATELAAARALVQQAAQALD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +      A  +  + K +       V   A++  GG GY+ E  I +  R+   + 
Sbjct: 307 RGDPQ------APYLCAMAKRFATDTGYTVADRALQLHGGYGYLSEYGIEKIVRDLRVHR 360

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL G+   M + V   L + 
Sbjct: 361 ILEGTNEIMRVIVARGLTEA 380


>gi|296444960|ref|ZP_06886922.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296257628|gb|EFH04693.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 390

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 139/380 (36%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P    L  +    GL     +  +         H +    L   +   
Sbjct: 33  PRAGDIDRDNAFPV--DLWPKMGALGLLGVTVEEDYGGAGLGYLEHVVVMEELSRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    + + P + S               V   L ++E   
Sbjct: 91  GLSYGAHSNLCVNQLRRNGSCEQKRRYLPGLVSG-------------DVVGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  ++ + +K  D         W  + P++D  I+ A+ E   G   +   + +   
Sbjct: 138 GSDVVNMSMRAEKRGDRYILNGEKMWVTNGPIADVVIVYAKTEPAAGAHGITAFIVEKRF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G+   R  +K+G R + T EL  ++        L V+   V  +   +  +  +++   
Sbjct: 198 KGVAAARKLDKLGMRGSDTCELFLTDCEVPEENVLGVAERGVNVLMSGLDYERCVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  MR  L   + Y   R   G  + +  +M+  +AD+   + AA A  + +A + D  +
Sbjct: 258 IGIMRACLDIVVPYVHDRKQFGQPIGEFQIMQAKLADMYTTLNAARAYVYAVAKACDRGR 317

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  + A  +  EA++C+GG+GYI +    R  R++    I  
Sbjct: 318 TTRKDAAGA-------ILFAAEHATRMALEAIQCLGGNGYINDYPTGRLLRDAKLYEIGA 370

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+     + +   L   T  
Sbjct: 371 GTSEIRRMLIGRELFTETAA 390


>gi|313229961|emb|CBY07666.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 128/373 (34%), Gaps = 26/373 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGH 150
              D+ +  P +     +    G+  ++    F           +    L  ++      
Sbjct: 57  REIDETDSFPEYREFWLKCGEQGVLGTLSAEEFGGTGMGLFETSLMLEELSRISGGVYMG 116

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +  S+ ++    T      + P + S                   L ++E   G+D
Sbjct: 117 IFAHTCLSSYVIERNGTAEQKAKFLPGLVSG-------------QTIGALAMSEPGSGSD 163

Query: 211 IAAITSQGQKI-SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED-GS 266
           + ++  Q  K      Y ++G K W  + P+ D  ++ A+ +    G   +     D   
Sbjct: 164 VMSMRCQAVKEAGKDYYVVNGTKFWITNGPICDTLVLYARTDPTSKGSKSITAFAIDVRE 223

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G     +  K+G R + T EL F N       +LG        +     +  L  A  
Sbjct: 224 LEGFTATPIPGKMGVRGSYTGELHFDNVKIPASAVLGAEGKGAAVLMKGLNVERLTGAAG 283

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V  M+ +   A  YA  R   G  + +  +M+  +A++   ++A  A  + L  + D+ 
Sbjct: 284 AVGYMQAACDCAFPYAHERKQFGVPIGEFQMMQSKMAEMYAQLSATRAYLYALLKAADK- 342

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++             +  + A  V  EA++ +GG+GY       R  R+     I 
Sbjct: 343 ----DQKTLTNHDCAAVLMYGAEQATKVSLEAIQILGGNGYTNAYPAERIMRDCKIGEIG 398

Query: 444 LGSGNAMVLDVLN 456
            G+     L +  
Sbjct: 399 AGTTEVRKLILGR 411


>gi|281337334|gb|EFB12918.1| hypothetical protein PANDA_005059 [Ailuropoda melanoleuca]
          Length = 364

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 131/361 (36%), Gaps = 27/361 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 25  PNMAEWDQKELFPV--DAMRKAAQLGFGGVYIRTDVGGSGLSRLDTSVIFEALSTGCTST 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S       ++           + P + + E                   LTE   G
Sbjct: 83  TAYISIHNMCVWIIDTFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 130 SDAASLLTSAKRQGDH-YILNGSKAFVSGGGESDIYVVMCRT-GEPGPKGISCIIVEKGT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   + N   G +  MK      ++ A  S
Sbjct: 188 PGLSFGKKEKKVGWNSQPTRAMIFEDCTVPVANRIGNEGQGFIIAMKGLNGGRINVASCS 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     Y   R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 248 LGAAHASVVLTRDYLSVRKQFGESLASNQYLQFKLADMATRLVASRLMIRNAAVAL---- 303

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A ++  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 304 --QEEREDAVVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 361

Query: 445 G 445
           G
Sbjct: 362 G 362


>gi|167033373|ref|YP_001668604.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859861|gb|ABY98268.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 589

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 92/550 (16%), Positives = 172/550 (31%), Gaps = 65/550 (11%)

Query: 30  LFIGMNAYSSD----SLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84
               M     D      L A +      +  +  + + E     TAQ +A ++     Q 
Sbjct: 7   PLRDMRFVLHDVFNAPALWARLPTLAERIDADTADAILEEAAKVTAQLIAPLSRNGDEQG 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +  G      V     +          G      +  +  +   +   +    +   A
Sbjct: 67  VHFDAG-----VVTTPDGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S  S   +    +  +   + P ++   +  T             + LTE
Sbjct: 122 DCSFSLYSALSAGSCLAIDAHASETLKATYLPPLYEGRWAGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLV 258
              GTD+  I ++ +  +DG Y +SG K F++    D       ++LA+  +   G   +
Sbjct: 169 PHAGTDLGLIRTRAEPQADGSYRISGSKIFITGGEQDLTENIVHLVLAKLPDAPAGAKGI 228

Query: 259 PRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
              L            G+ N      +++K+G +++AT  + F   FG+L+G+ N     
Sbjct: 229 SLFLVPKYQVEANGQLGARNAAHCGSIEHKMGIKASATCVMNFDGAFGYLVGEPNKGLAA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   I  +     S   A  YA  R  S               +I    ++
Sbjct: 289 MFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAASGPQAQDKAADPIIHHGDVR 348

Query: 357 RAIADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +        A +        LA   ++A  R        ++ P+ K +       
Sbjct: 349 RMLLTMRTLTEGGRAFAAYVGQQLDLARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
                 +  GG GYI E    +  R+     I  G+     LD+L   +L  G       
Sbjct: 409 SCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASF 468

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA---LYRAGMNDI 525
            + + +            L+ S++  +      R      A   SA A   L   G+   
Sbjct: 469 AAEV-RAFSVDAPLHREALQASLARLEATSAWLRARAGADANLVSAVAVEYLQLFGLT-- 525

Query: 526 ADVFLENRFL 535
           A  ++  R  
Sbjct: 526 AYAYMWARMA 535


>gi|205375177|ref|ZP_03227968.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           coahuilensis m4-4]
          Length = 594

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/474 (18%), Positives = 170/474 (35%), Gaps = 46/474 (9%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + +E H   H   LL+ +   GL  +     F  +   +      A     A   +   
Sbjct: 53  VENLENHEFEHSVRLLKEAGELGLLGADVPEEFGGIGLDKVSSALIAEKMSRAGGFSITH 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L        ++ P + + E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVLFGNDNQKNNYLPALATGE-------------KLAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +  +  ++G  Y L+G K W  ++  +D F++ A+++G          + +    G
Sbjct: 160 LGAKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEQ----FSAFIVEREFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G +S++T  L   +    +   L     G V    IL        + +V 
Sbjct: 216 VSVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGDAGKGHVIAFNILNIGRYKLGVGAVG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             + +L     Y  +R      +    + K  ++ +A  + A+ +  +R    F+E    
Sbjct: 276 ATKRALEVTAEYTNQRQQFKTPISSFNLTKEKLSTMAAKLYASESSVYRTVGLFEERMSR 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    K  ++  A   I   + K++  ++   V+ E ++  GG G+++E  I R Y
Sbjct: 336 LTDEEVRDGKEVAKSIAEYAIECSLNKFFATEVLDYVVDEGVQLHGGYGFMQEYEIERMY 395

Query: 435 RESPANSILLGSGNAMVLDV----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           R+S  N I  G+     L V    L    KG     Q   TL+++L     + I      
Sbjct: 396 RDSRINRIFEGTNEINRLLVPGTFLRKAMKGELPLLQKAQTLQEELMMMMPEEIGD---- 451

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                ++K L R   +KI L ++  A  + G     +  +     D   + + M
Sbjct: 452 -EPLAQEKVLVRN-AKKIGLLAAGLAAQKFGKKLEQEQEILVNIADIVSNAYAM 503


>gi|260904522|ref|ZP_05912844.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 382

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++    D  +              +      +     M     
Sbjct: 34  EYPEKWIQTMK---DMGIYGLAIDEPWGDGKVSTEAYALITQELARGWMSLAGAMGGHTV 90

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++A   T      + P++ + E   T             + LTE  GG+D+ A+ + 
Sbjct: 91  VAKLIAEYGTSEQKDKYLPRMATGELRAT-------------MALTEPGGGSDLQALRTA 137

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRL 275
             K  +         W  ++  SD   +L + +         +  +L +    G    + 
Sbjct: 138 AAKDGEDYVINGSKTWITNARKSDLIALLCKTDPSAEPRHKGISIILVEKG-EGFTVSKN 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            +K+G +   T EL F N        L      G  + MK L    +  A  S+   + +
Sbjct: 197 LSKLGYKGVETCELVFENLRQPQSQLLGSVEGVGFKQMMKGLEIGRIQVASRSLGVAQAA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ Y++ R   G  +     +   +A +A  + AA  L    A ++D  +    EA 
Sbjct: 257 LNDAVKYSQERESMGKPIWRHQAVGNQLAKMATKLEAARQLVLHAARTYDSGERVDMEAG 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       KY+  +MA  V  +A+   GG GY  E  + R+YR++P   +  G+    +
Sbjct: 317 MA-------KYYASEMAAEVALDAIRVHGGYGYSTEYDVERYYRDAPLMIVGEGTNEIQL 369

Query: 452 LDVLNLL 458
             +   L
Sbjct: 370 GVIAKQL 376


>gi|59803160|gb|AAX07730.1| isovaleryl-CoA dehydrogenase-like protein [Magnaporthe grisea]
          Length = 470

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 139/381 (36%), Gaps = 29/381 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
             R DK    PA   +  +    GL     + S   +    QAH I    L   +   A 
Sbjct: 110 AARTDKENEFPA--DMWGKLGDMGLLGVAAEESVGGLAMGYQAHCIVMEELSRASASIAL 167

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S    + + L   P   + + P + +                   L ++E   G+
Sbjct: 168 SYAAHSQLCVNQLQLNGNPEQKQRFMPDLIAG-------------RKVGALAMSESGSGS 214

Query: 210 DIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           D+ ++ ++  + +DG          W  + P +D  I+ A+ +        +   + +  
Sbjct: 215 DVVSMRTRATRTADGSGWLLNGSKMWITNGPDADVIIVYAKSDTECQPSKGITAFIVERQ 274

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
           P GL   R  +K+G R + T EL   N       +LG++N     + +   L  L  +  
Sbjct: 275 P-GLQCLRKLDKMGMRGSNTGELVLENVIVPDENVLGEVNAGXRVLXEGLDLERLVLSAG 333

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M+ +L  A+ YA  R   G  + +  +++  +AD+   +  + A ++  A   D  
Sbjct: 334 PLGIMQAALDVALPYAHARQQFGRPIAEFQLVQGRLADMYTKLQVSRAYTYATARRID-- 391

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E              +  + A  V  + ++ +GG GY E+   +R  R++    I 
Sbjct: 392 ----ESGEIKTADCAGAILYAAERATEVALDCIQVLGGMGYTEDMPASRLLRDAKLYEIG 447

Query: 444 LGSGNAMVLDVLNLLEKGTNL 464
            G+     + +     +  +L
Sbjct: 448 AGTSEVRRMVIGRYFNREYSL 468


>gi|226360967|ref|YP_002778745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239452|dbj|BAH49800.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/416 (19%), Positives = 144/416 (34%), Gaps = 42/416 (10%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
            + PS    E++ L E  +    +E+             +     R D+         + 
Sbjct: 3   KHVPSWHDDEVKALSELAVGFFEREVVAHNEK-------WDAQ-HRIDR--------EVW 46

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
             +   GL C      +       AH +        A   A  +   S   A  +    T
Sbjct: 47  LAAGKLGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYAGDLALGISVHSGIVAHYLLEYGT 106

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K W P + + E             +   +G+TE   G+D+ AI +   +  D  Y 
Sbjct: 107 EEQKKTWLPGMATGE-------------ILGAIGMTEPGAGSDLEAIKTTAIRDGDE-YV 152

Query: 228 LSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNA 285
           ++G K F+++  S   I+LA + + + G   V  L+ D     G    R+ +K+G     
Sbjct: 153 INGSKTFITNGASADMIVLAVKTDPKAGAKGVALLIVDLRDCPGFAVGRVLDKVGQHGAD 212

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F++       LLG+     G +    +   L     +   M  ++ + + Y + R
Sbjct: 213 TSELSFTDVRVPVSNLLGEERQGFGQLMAQLVQERLIIGAQASGAMNRAVEDTVAYTKSR 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L +       +A+          ++   A   D               A + KY
Sbjct: 273 QAFGHSLFEFQNTAFELAECQT-------IARTCAVFLDHCIEAHLRGELDPSEAAMVKY 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +   AVI   ++  GG GY+ E  IAR Y ++    I  G+   M   +   L
Sbjct: 326 WLTEQQCAVIDRCVQLHGGYGYMREYLIARMYEDARVQKIYAGANEVMKGIIAKSL 381


>gi|153005858|ref|YP_001380183.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029431|gb|ABS27199.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 560

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 132/528 (25%), Positives = 216/528 (40%), Gaps = 47/528 (8%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMAN 78
            A  Q P  +  NAY SD LL   +A   S        ELE LGE        + A  A 
Sbjct: 1   MAFFQDPPRL-ANAYLSDPLLREHLARALSGTLPEAEPELEHLGELAAGRLFAQQA--AE 57

Query: 79  YN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            +  P+L  +   G R D+VE  P W      +   GL  + ++R      R      + 
Sbjct: 58  RHLEPRLEPFDAWGRRVDRVELTPLWREAAALAARHGLVAAAYERRHGGASR----VHQL 113

Query: 138 ARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           A +Y++      +      +  +A  +       +     P++ SR+             
Sbjct: 114 ALVYVLEPSLDVYACPLAMTDGAARTLLDAGNAALVARALPRLTSRD---------PARM 164

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG---- 251
              G  +TE+ GG+D++   +  ++  +  + L G KWF S+  ++  + LA+ +G    
Sbjct: 165 WTSGQWMTERTGGSDVSGTETVARRDGEA-WRLHGTKWFSSATTAEMALALARPDGAPAG 223

Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              +  F +    EDGS NG+   RLK K+G R   T EL         +  L      V
Sbjct: 224 SRGLALFYLETRDEDGSTNGVLVNRLKEKLGTRKLPTAELTLDGALALPVSGLADGVRAV 283

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M  +    +++++ +GM+ +LA A  YARRR   G  L  +P+    +A +  +   A
Sbjct: 284 APMLTVTRTWNSVVAAAGMQRALALARDYARRRAAFGAPLARKPLHADTLAGLEAEREGA 343

Query: 370 TALSFRLAN---SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             L+FR A      +  ++   E    R + P+ K    K A AV +EA+EC GG+GY+E
Sbjct: 344 FLLAFRAAALLGRAECGEASDAERLALRAVTPLAKLTTGKQAVAVASEALECFGGAGYVE 403

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG----KK 482
           +  + R  R++    I  G+ N + LDVL  L  G    E L + + + LG +     + 
Sbjct: 404 DTGLPRLLRDAQVLPIWEGTTNVLALDVLRALA-GEGTAEALAAEIRRHLGDAREPSLRP 462

Query: 483 VITILRDSISLCKED---------KGLARFLTEKIALASSAAALYRAG 521
            I   R ++   +           +  AR L   +  A   A L    
Sbjct: 463 AIEAARGALERARAWLAETGGPAREAGARRLALTLGRALELALLISHA 510


>gi|262371617|ref|ZP_06064896.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311642|gb|EEY92727.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 390

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 145/380 (38%), Gaps = 23/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L +++   GL    +D     +    A  I      L+A
Sbjct: 28  KEISPYVNEWDEAGTFP--RELYQKAASIGLLGLGFDAEHGGIPEADAFHI------LLA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +E     S  V  + M+  + TP +H    P     E        +        L +TE
Sbjct: 80  AIEMAKAASGGVHISLMIHSIGTPPIHHFARP-----EIRDEVMPQIIAGEKISALAITE 134

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLL 262
             GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +    G   +  LL
Sbjct: 135 PSGGSDVAALKTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPNGQGPKGISMLL 193

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            D    G+    LK K+G  ++ T  L F         LLG  N     + +   +    
Sbjct: 194 MDAHSEGITKSPLK-KMGWWASDTAHLHFDEVRVPVSHLLGQENAGFKVIMNNFNMERFW 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              ++     V   EA+ +A++R   G  LID  V++  + D+A  + A  AL    A  
Sbjct: 253 LGAIAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTATRALLEDTAYR 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + + +  E         + K    +        A++ +GG G++      R YRE   
Sbjct: 313 MGKKELQGSE---LIAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGMKSERIYREVKV 369

Query: 440 NSILLGSGNAMVLDVLNLLE 459
           N I  G+   M   +   L+
Sbjct: 370 NMIGGGAEEIMKDLISKQLK 389


>gi|254474141|ref|ZP_05087533.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211956837|gb|EEA92045.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 390

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 145/377 (38%), Gaps = 26/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+    P    L +++   GL   ++   +          I     YL A
Sbjct: 35  EEISPYASQWDEANEFP--RELYKKAADVGLLGIMFPEEYGGTG------IDYPLSYLSA 86

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +E G   S  + +  M   + TP +       + S E        +        L +TE
Sbjct: 87  -VELGRAGSGGINAGLMSHTIGTPPIA-----HLGSDELKARVIPSVLAGEKISALAITE 140

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             GG+D+  + +  ++  +G Y L+G K F++S M   +  +A   G  G   +  +L +
Sbjct: 141 PGGGSDVQNLKTVARRE-NGHYVLNGEKTFITSGMRADYYTVAVRTGDTGMGGISLMLVE 199

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G     L +K+G  ++ T  L F N       L+G  N     +        L  A
Sbjct: 200 KGMEGFTQTPL-HKMGWWASDTATLYFDNVKVPVENLIGGENAGFMGIMMNFNNERLFLA 258

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                 M     EA+ +A++R   G  LI + V++    D+A+ + A  A+   LA    
Sbjct: 259 SACYGHMLGVFEEALDWAQQRETFGKPLIHRQVIRHKFVDMAMKMQAVRAVLEELAQRLQ 318

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +S   E   A+ +A  T  +       V  E ++ +GG+GY+    + R YRE+   +
Sbjct: 319 LGESPITEICMAKNLATSTLEY-------VANECLQILGGAGYMRGTKVERIYRETKVMT 371

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M       +
Sbjct: 372 IGGGSSEIMKDLASRQM 388


>gi|83721003|ref|YP_440620.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167617415|ref|ZP_02386046.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|83654828|gb|ABC38891.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 378

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 136/374 (36%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW++  +      +  ++   G HC+    ++        + I        A    
Sbjct: 28  PYHERWEEQGYVD--RGVWTKAAEAGYHCASMPEAYGGAGADIRYSIVLFEEIARAGASG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +       +   + PK+ S E                 + +TE   G
Sbjct: 86  LGFGLHSEIVAPYILHYGDDALKARYLPKLASAEM-------------IGAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  + +   +  D  Y L+G K F+++   +D  I++A+     G       + D   
Sbjct: 133 SDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G ++  T EL F       G LLG+ N     +        L  AI +
Sbjct: 192 AGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQELPWERLQIAISA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++    +LA  + Y R R   G  +ID    + A+A++  +I        +        K
Sbjct: 252 IASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +  A+ A       KYW  ++   VI   ++  GG GY+ E  IAR + +S    I  
Sbjct: 312 LDAATASMA-------KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 365 GTNEIMKELIARTL 378


>gi|167839083|ref|ZP_02465860.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 377

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 131/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EVVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T    + W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTTEQKERWLRDLASG-------------KTIGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMTDPDEGKRGLSAFVVPAD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E ++I L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGRRGEGLRIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATQINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|251794527|ref|YP_003009258.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247542153|gb|ACS99171.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 591

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/393 (19%), Positives = 138/393 (35%), Gaps = 36/393 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+R++   GL  +    ++  +   +      +     A   A  + + +      +  
Sbjct: 63  KLMRQAGELGLLGADVPEAYGGLGLDKVSTTLLSETLARASSFALSVGAHTGIGTLPIVF 122

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PK+ + E             +     LTE   G+D     +  +   DG
Sbjct: 123 FGTAAQKRKYLPKLATGE-------------LIAAYCLTEPASGSDALGAKTTAKLSQDG 169

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K +  ++  +D FI+ A+VEG          + +    G      ++K+G +
Sbjct: 170 SHYILNGSKLYITNAGFADVFIVYAKVEGEA----FSAFIVEKGMPGFSLGPEEHKMGIK 225

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L F +    +   L  +  G      IL           + G + ++  A  YA
Sbjct: 226 GSSTRPLFFEDVAVPVENVLGEIGQGHKIAFNILNIGRFKLGAGCLGGSKETIELASKYA 285

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM--- 396
             R   G  +   P++   +AD+ +      ++ +R A   D   S     A A      
Sbjct: 286 NTRKQFGRAISSYPLIGAKLADMNIRTFVLESMVYRTAGWIDAMLSAEGAGADAPDAGMR 345

Query: 397 -----------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                        I K +  +    V  E ++  GG GYI+E  + R YR+S  N I  G
Sbjct: 346 AAKAISEYALECSINKVFASETLDFVADEGVQIHGGYGYIKEYKVERIYRDSRINRIFEG 405

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +     + +   L K     E       Q L +
Sbjct: 406 TNEINRMLIPGTLLKKAMKGELPLLEKAQSLQA 438


>gi|134097255|ref|YP_001102916.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133909878|emb|CAL99990.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 382

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 126/348 (36%), Gaps = 30/348 (8%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +    +     ++       A +  G  +S    +   +A   T    + W P +
Sbjct: 58  PYPEQYGGGEQPYEVYLQVLEEISRAWMTVGVGLSVHTMACFPLAHFGTDGQREKWLPDM 117

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                               G  L+E   G+D AA++++  +  D         W     
Sbjct: 118 IGG-------------RTLGGYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGG 164

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D + ++A+     G   +  LL DG+  GL     ++K+G   + T EL F       
Sbjct: 165 VADFYTLMARTSDD-GPRGISCLLVDGTTPGLSAGTPEHKMGLTGSPTTELRFDGARVPA 223

Query: 299 LGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +     + +KI +       L  A  +V   + +L  A+ YA++R   G  +I+ 
Sbjct: 224 ---ERLVGAEGDGLKIALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEF 280

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A  + +A A     A   D             + A + K      A  V 
Sbjct: 281 QGLEFLLADMAAVVHSARATYLDGARRRDAGMPFG-------MQASVAKLVATDAAMKVT 333

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +A++ +GG GY  +    R+ RE+    I  G+     + +   L K
Sbjct: 334 TDAVQVLGGVGYTRDFPAERYMREAKVLQIFEGTNQIQRMLIGRHLAK 381


>gi|256391383|ref|YP_003112947.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256357609|gb|ACU71106.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 385

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 134/378 (35%), Gaps = 36/378 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G  +++ EF    + ++ +    GL    +   +  +         A             
Sbjct: 29  GAFYEREEFP---YEIVAQMGRMGLFGLPFPEEYGGMGGDYFALCLALEELARVDSSVAI 85

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   V+  +M      T    + W PK+ S E                  GLTE  GG+
Sbjct: 86  TLEAGVSLGAMPVYRFGTEEQKQQWLPKLCSGEM-------------LGAFGLTEPGGGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLEDG 265
           D     +    + +G + ++G K F+++  +D      + A       G   +  ++   
Sbjct: 133 DAGGTRTTAV-LENGEWVINGTKCFITNSGTDITGLITVTAVTGTKPDGRKEISSIIVPS 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              GL      +K+G  ++ T EL F++        L        +   L  LD   +++
Sbjct: 192 GTPGLTVAPKYSKVGWNASDTRELSFTDVRVPEANLLGDLGRGYANF--LRTLDEGRIAI 249

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +   L      E++ YAR R   G  +     ++  +AD+ L    +    +  A+  
Sbjct: 250 AALSTGLSQGCVDESVKYARDREAFGRPIGANQAIQFKLADMRLRAHTSRLAYYDAASRM 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +    EAA A       K +  + A     EA +  GG G++ E  +AR +R+S   
Sbjct: 310 LAGEPFKAEAAMA-------KLYSSESAVTNAREATQIHGGYGFMNEFPVARMWRDSKIL 362

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   +
Sbjct: 363 EIGEGTSEVQRMLIARDM 380


>gi|254522364|ref|ZP_05134419.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219719955|gb|EED38480.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 382

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 151/397 (38%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  LQDVARRIAQEKIAPSAEHHDRTGE-------FPL--DNIRLLGENGLMGIEVPTEYGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                  + A      A      +MS  +    + +    T    + +   I   E    
Sbjct: 63  GMDPVAYVLAMVEVAAADAAHSTIMSVNNSLFCNGILTHGTEAQKQTYVRAIAEGE---- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D  A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 119 ---------AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   ++    +V 
Sbjct: 170 FAMSEPEKGARGITAFIIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAAAEDVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  KI +  LD+  + ++   + +A A +     Y + R   G  +    + +  I
Sbjct: 227 GQEGEGFKIAMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + K  S EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWVKGQGKRFSTEAAVAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|257388129|ref|YP_003177902.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170436|gb|ACV48195.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 376

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 133/401 (33%), Gaps = 39/401 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIW 120
           +  +  T +E+A  A    P            D+ +  P  AW  L        +     
Sbjct: 7   QRAIRDTVREVA--AEEIRPV-------ARECDREQTFPEDAWDTLAEI----DVTGLTV 53

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             ++  +   +              L     +S    + S +A     ++ + W P + +
Sbjct: 54  PEAYGGLDVDRQTYAVVNEAVAHGSLAVATALSVHCLATSCLATFGDEQLREAWLPDMVA 113

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                L+E   G++   + +  ++  D         W  +   S
Sbjct: 114 G-------------RPVGAFALSEPEAGSNPRQMQTVARREGDEYVIDGEKAWITNGQRS 160

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
              I+ A+ +       V + L     +GL     + K+G R++ T  L   +      +
Sbjct: 161 GVVIVFAKTDPDDPNS-VTQFLVPKDSDGLTVGSKEEKLGLRASDTTTLTLDDVRIPDRY 219

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L +          +     +  A  +V   + +L EA+ Y   R    G + D   ++ 
Sbjct: 220 RLTEEGRGLAAALSILTGGRVGIAAQAVGLSQAALDEAVDYVTEREQFDGPIGDIQSVRH 279

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++   + A   L+   A + D           AR  A + KY+  + A  V  +A++
Sbjct: 280 TIAEMETTVRAGRELTHAAARAMDRGDD-------ARASASVAKYFATEGAVDVTQQAVQ 332

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY  E  + R YR++   +I  G+       +   L
Sbjct: 333 LHGGYGYTSEFDVERFYRDAKVTTIYEGTSQIQKNVIARSL 373


>gi|32469592|sp|Q8HXY7|ACADV_MACFA RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=VLCAD; Flags: Precursor
 gi|23574696|dbj|BAC20581.1| Very-long-chain acyl-CoA dehydrogenase [Macaca fascicularis]
          Length = 655

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 154/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 189 ILLFGTKAQKEKYLPKLASGE-------------TLAAFCLTEPSSGSDAASIRTSAVPS 235

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 236 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 295

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 296 PEKKMGIKASNTAEVLFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A+ YA  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 353 RGIITKAVDYATNRIQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 410

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 411 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 467 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIV 525

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 526 HPELSRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|312141503|ref|YP_004008839.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677282|ref|ZP_08156948.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890842|emb|CBH50161.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551979|gb|EGD21675.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 387

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 135/372 (36%), Gaps = 27/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  PA   L+RR     L        F  +      ++ A      A    
Sbjct: 29  PGAAERDESKEFPA--RLMRRLAEQDLMGISVPEEFGGLGLSTRAQLVAVEEVARADAAL 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +        + +  T    K W P + S E             V  G  LTE   G
Sbjct: 87  ASIYTAHYLGLEPILVGGTEEQKKRWLPGLASGE-------------VLAGFALTEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +DIA++ +  ++  DG + LSG K F+S+   +D  ++ A+ +   G   +         
Sbjct: 134 SDIASMRTVARREDDGWH-LSGSKTFISNAREADLVVLFAKTDPSAGFRGITAFAVPKGT 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+ Y   ++K+G RS  T  +   +       ++G                 +D A M+
Sbjct: 193 PGISYSEPQDKMGIRSAPTYTVYLDDVVLPHDAVIGTEGRGGNIALTALNRARIDVAAMA 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                 +      YA  R   G  + +   ++  + +    + A+   +   ++  D  +
Sbjct: 253 NGIALRAWELGREYASERKQFGHPIFEFQAIQLLLGECDAKLVASRVTADWASDVKDAGQ 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    R  A I+KY   +   +++ + ++  GG+G++ E  I R YR+     I  
Sbjct: 313 D-------LRRAASISKYVATEACFSIVDQVVQIHGGAGFMRESEIERLYRDCRILRIFE 365

Query: 445 GSGNAMVLDVLN 456
           G+    +L +  
Sbjct: 366 GTSQIQLLTIAG 377


>gi|15920255|ref|NP_375924.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15621037|dbj|BAB65033.1| 400aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 400

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 139/363 (38%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              ++      + + 
Sbjct: 49  KEILEKAKELGLYGITVPEEYGGQGGDTLMSAIAQEEISRIWPSFATRVAAGALFTTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +  + K + P             P+ +      L  TE   G+D+A + S  +KI +
Sbjct: 109 LFGSEELKKKYVP-------------PVARGEKVAALANTEPSAGSDVAGMQSTAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y L+G K F+++  ++D +++ A+    + +     +   + +    G+      + +
Sbjct: 155 GKYILNGRKIFITNGGIADYYVVTARTSPPDPKARWKGISMFVVEREWKGVKVVSRIDTL 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEA--- 335
           G +++ T EL F +     + + NV        K  +   D   + V+   + +A+A   
Sbjct: 215 GLKASNTAELIFEDV---EIPEENVVGEEGNGFKYAMATFDRTRVGVAAQALGVAQAALE 271

Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + YA +R   G  ++   +++  IA+   ++  A  L++  A  FD+          A
Sbjct: 272 KMVSYASQRIAFGEPIVMFELVQEKIAESLTEVNTARLLTYWAATLFDKGLENE-----A 326

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            + A + KY+  ++A  V+  A+   GG G      + R  R+     I  G+ +   L 
Sbjct: 327 IVAASMAKYYSTEIAEKVVIRAITVHGGYGVATSTGVERLLRDVEVMKIYEGTNDIQKLT 386

Query: 454 VLN 456
           ++ 
Sbjct: 387 IVK 389


>gi|260427196|ref|ZP_05781175.1| isobutyryl-coa dehydrogenase, acyl-coa dehydrogenase family member
           8 [Citreicella sp. SE45]
 gi|260421688|gb|EEX14939.1| isobutyryl-coa dehydrogenase, acyl-coa dehydrogenase family member
           8 [Citreicella sp. SE45]
          Length = 379

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 127/377 (33%), Gaps = 25/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W+     P    L       GL               +           MA
Sbjct: 22  EQIAPHAAAWEAEGTIP--RELWHEVGLLGLGGIYVSEENGGSGLSRLDATLVFEALSMA 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  +S     A M+    +P + + +  +  + E               +   LTE
Sbjct: 80  CPSVAAFLSIHNMCARMIDAYGSPELKERFLARACAME-------------TVLSYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+ ++ +   +G        +      SDA++++A+  G  G   +   + +
Sbjct: 127 PGSGSDAAALRTRAEPAGNGWALTGTKAFISGGGYSDAYVVMAR-SGADGPRGISAFVIE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL +  L+ K+G ++  T +++          LLG+                L+ +
Sbjct: 186 DGTEGLSFGGLEQKMGWKAQPTRQVQMDGCVIPAANLLGEEGKGFRYAMAGLDGGRLNIS 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D
Sbjct: 246 ACSLGAAQAALDATLRYMAERRAFGQSIDQFQALQFRLADMEIELQAARTFLRQAAWKLD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +          A     + K +  +    V  + ++  GG GY+ +  I +  R+   + 
Sbjct: 306 QGAPD------ATKFCAMAKKFVTEAGSKVADQCLQLHGGYGYLADYGIEKIVRDLRVHQ 359

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 360 ILEGTNEIMRLIVARGL 376


>gi|56541110|gb|AAH87036.1| Acyl-Coenzyme A dehydrogenase, very long chain [Rattus norvegicus]
 gi|149053147|gb|EDM04964.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_c
           [Rattus norvegicus]
          Length = 655

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/467 (18%), Positives = 171/467 (36%), Gaps = 58/467 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G            +        R A +  M  L     L +        + L  T   
Sbjct: 138 ELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQ 197

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P++ S                     LTE   G+D+A+I S       G  Y L+
Sbjct: 198 KEKYLPRVASG-------------QALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLN 244

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   +D F + A+   +          +   + + S  G+ +   + K+G ++
Sbjct: 245 GSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKA 304

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337
           + T E+ F           NV     +  K+ +  L++    ++      M+  +A+A+ 
Sbjct: 305 SNTSEVYFDGVKVPA---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKAIIAKAVD 361

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +  V++  +A +A+      ++++ L+ + D+  K    EAA     
Sbjct: 362 HATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA----- 416

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V  
Sbjct: 417 --ISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGTNDILRLFVAL 474

Query: 456 -NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS-------------LCKEDK 498
              ++KG  L   L + L+  LG+ G    +    LR                       
Sbjct: 475 QGCMDKGKELTG-LGNALKNPLGNVGLLIGEASKQLRRRTGIGSGLSLSGIVHPELSRSG 533

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            LA    E+ A    A  + +     + + FL  R  D     + M+
Sbjct: 534 ELAVQALEQFATVVEAKLM-KHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|99081400|ref|YP_613554.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037680|gb|ABF64292.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 387

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/387 (21%), Positives = 139/387 (35%), Gaps = 36/387 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N   P+   +   GE  D+        +   ++   GL C      +        H+   
Sbjct: 31  NEWAPKFERWRKQGE-MDR--------STWAQAGELGLLCPSIPEEYGGAGGDFGHEAAI 81

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                 A L +      S   A  +    T    + W PK+ S E             + 
Sbjct: 82  LIEASRANLASWGHGIHSGIVAHYILSYGTEEQKQRWLPKMVSGE-------------LV 128

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCF 256
             L +TE   G+D+ AI ++  +  + +Y LSG K F+++      I + A+ +   G  
Sbjct: 129 GALAMTEPCTGSDVQAIKTKAIRDGN-VYRLSGQKTFITNGQHANLILVAAKTDPSQGAK 187

Query: 257 LVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMK 313
            +  + LE     G    R   K+G  +  T EL F N        L    + G  + M+
Sbjct: 188 GISLVALETEGAEGFSRGRNLEKVGLHAADTSELFFDNIAVPPENILGATEAQGFYQMMQ 247

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L    L  A  +V  M+ ++   I Y + R   GG L      +  +A+       A A
Sbjct: 248 QLPQERLIIACGAVGAMQGAVERTIAYCKEREAFGGPLTQFQNTRFKLAECLTKSKVARA 307

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                       +   E+AA A       KYW      AV+ E ++  GG G+++E ++A
Sbjct: 308 FLDDCMVQHLRGELTVEKAAMA-------KYWITDAQGAVLDECLQLHGGYGFMQEYAVA 360

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
             + ++    I  G+   M   +   L
Sbjct: 361 EMWTDARVQRIYGGTNEIMKELIARSL 387


>gi|313903798|ref|ZP_07837187.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313465986|gb|EFR61511.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 529

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 118/514 (22%), Positives = 212/514 (41%), Gaps = 49/514 (9%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N +  D  L  ++A++    +    +L   G        +    + +   P L  +  
Sbjct: 9   GQNHWEVDPDLRHVLAHYWPAFTAHEAQLRRFGALSGKEVYEVAYHVDHDAPPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   PA  ALLR                 P     +   + A  YL+A     
Sbjct: 69  DGHRVDRVRLSPAQEALLRELA----------PMNRPPYEGGSWHHQYALGYLVADPGIY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +  +A ++          +W  K+   E+                  +TE +GG+
Sbjct: 119 CILTITNQTAYIIHKYAAE--FGEWKDKLLRGEFWG-------------ATWMTEVQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A T Q  +  D  + L G K+F S   ++D  ++ A+ +G       +  FLVPR+ 
Sbjct: 164 DLGANTLQATRNGDA-WRLDGEKYFCSGAGLTDVAVVTARPQGAPAGPKGLALFLVPRMN 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G+ N    +RLK+K   R+  + E++F  +  FL+G+         ++  +  L +AI
Sbjct: 223 RAGALN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEQGIYYTLEVLTVSRLANAI 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS--- 379
             +   R +  E +   RRR   G  L+D P+++R + D+A+ IA    L F  A+    
Sbjct: 282 AGMGIARKAHLEVLERVRRRRSFGRPLVDHPLIRRDLTDMAVRIAGGLMLGFHAADLFEK 341

Query: 380 -FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +DE    +    YAR ++ + K      A  V   AME  GG G++EE ++AR +RE+ 
Sbjct: 342 AWDELPPYTARYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEYAVARWHREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQDLGSSGKKVITILRDSISLC- 494
              I  G  N   LD+L  + K         +    LE+   +  +    ++  +++   
Sbjct: 402 ITPIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIPMLEKAGTAEARTAREVIEATLARLA 461

Query: 495 ----KEDKGLARFLTEKIALASSAAALYRAGMND 524
               +E +  A+  T ++A A+    LY+     
Sbjct: 462 GSKPEEAQWYAKDATARLADAAQVGLLYKLAETA 495


>gi|66045014|ref|YP_234855.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|63255721|gb|AAY36817.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
          Length = 383

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 141/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPYAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHAWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPALGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I AA  L+   A      ++   E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINAARLLTLHAARLRSAGQACLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|319784528|ref|YP_004144004.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317170416|gb|ADV13954.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 133/368 (36%), Gaps = 26/368 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P     D+    PA   L       GL     D  F        AH I    +   +
Sbjct: 28  RIAPIAADIDRSNEFPAH--LWGEFGALGLLGITADPDFGGSGMGYLAHVIAVEEISRAS 85

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + +    T    + + P + S E                 L ++E
Sbjct: 86  ASVGLSYGAHSNLCVNQINRWATQAQKEKYLPPLCSGE-------------RVGALAMSE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K +D         W  + P ++  ++ A+ +       +   + +
Sbjct: 133 SGAGSDVVSLKLRAEKRNDRYVLNGTKMWITNGPDAETLVVYAKTDPDQKSRGITAFIVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +  G    +  +K+G R + T EL F +        L+     VE +   +  +  +++
Sbjct: 193 KAFAGFSVAQKLDKLGMRGSNTGELVFRDVEVPFDNVLHEEGRGVEVLMSGLDYERTVLA 252

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M   L  AI Y   R   G  + +  +++  +AD+   + AA A  + +A + D
Sbjct: 253 GGPIGLMAACLDVAIPYVHERKQFGQAIGEFQLVQGKLADMYTTLNAARAYVYAVAAACD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  ++AA           +  + A  +  +A++ +GG+GYI +    R  R++    
Sbjct: 313 RGQTTRKDAAG-------CVLFAAEKATLMALDAIQLLGGNGYINDYPTGRLLRDAKLYE 365

Query: 442 ILLGSGNA 449
           I  G+   
Sbjct: 366 IGAGTSEI 373


>gi|6978435|ref|NP_037023.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Rattus norvegicus]
 gi|1168287|sp|P45953|ACADV_RAT RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=VLCAD; Flags: Precursor
 gi|559722|dbj|BAA06331.1| very-long-chain Acy1-CoA dehydrogenase [Rattus norvegicus]
          Length = 655

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/467 (18%), Positives = 171/467 (36%), Gaps = 58/467 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G            +        R A +  M  L     L +        + L  T   
Sbjct: 138 ELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQ 197

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P++ S                     LTE   G+D+A+I S       G  Y L+
Sbjct: 198 KEKYLPRVASG-------------QALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLN 244

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   +D F + A+   +          +   + + S  G+ +   + K+G ++
Sbjct: 245 GSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKA 304

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337
           + T E+ F           NV     +  K+ +  L++    ++      M+  +A+A+ 
Sbjct: 305 SNTSEVYFDGVKVPA---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKAIIAKAVD 361

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +  V++  +A +A+      ++++ L+ + D+  K    EAA     
Sbjct: 362 HATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA----- 416

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V  
Sbjct: 417 --ISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGTNDILRLFVAL 474

Query: 456 -NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSIS-------------LCKEDK 498
              ++KG  L   L + L+  LG+ G    +    LR                       
Sbjct: 475 QGCMDKGKELTG-LGNALKNPLGNVGLLIGEASKQLRRRTGIGSGLSLSGIVHPELSRSG 533

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            LA    E+ A    A  + +     + + FL  R  D     + M+
Sbjct: 534 ELAVQALEQFATVVEAKLM-KHKKGIVNEQFLLQRLADGAIDLYAMV 579


>gi|321312828|ref|YP_004205115.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5]
 gi|320019102|gb|ADV94088.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis BSn5]
          Length = 594

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 169/482 (35%), Gaps = 62/482 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D +E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    +    K + P + S E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGSEEQKKKYLPGLASGE-------------KIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + +    G
Sbjct: 160 LGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKEFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  I  +A  + A  +  +R    F++    
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPIAGFSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 FTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK  +L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVPSTFLKKALKGELPLFEKAQSLQEELMMLMPEEPGS---- 451

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                     + +++K + +   +KIAL ++  A  + G     +  +     D   + +
Sbjct: 452 ---------GVLEQEKYIVKQ-AKKIALFAAGLAAQKYGKAIDREQEILVNVADIVSNVY 501

Query: 543 CM 544
            M
Sbjct: 502 AM 503


>gi|321249273|ref|XP_003191401.1| isovaleryl-CoA dehydrogenase 2, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317457868|gb|ADV19614.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 417

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 139/401 (34%), Gaps = 30/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                  AQE  R    +  Q     P     DK    P    +  +    GL       
Sbjct: 31  AVAGLTEAQEEFRNVVQHFAQ-KEIAPRAAEIDKTNKLP--QDIFPKLGEMGLLGVTVPE 87

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +      H I    +   +   A    + S    + +    T      + P + + 
Sbjct: 88  KWGGLGLGYLEHTIAMEEISRASASVALSYGAHSNLLVNQLVRWGTEEQLSKYLPPLLTG 147

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239
           E+                L ++E   G+D+ ++ +   K    +G        W  ++P+
Sbjct: 148 EH-------------IGSLAMSEPDAGSDVVSMRTNAIKGDKGEGWTMNGSKCWITNAPV 194

Query: 240 SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
           S  F++ A+ +  V     +   L +    G       +K G R + T EL F N     
Sbjct: 195 SSTFLIYAKSDTNVAPSKGMTAFLVEKGWEGFEVGESLDKFGMRGSPTAELFFDNVKIPE 254

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             +LG++      +     L  L  +   +  M+ +L  A+ Y   R   G  +    +M
Sbjct: 255 ENVLGEVGKGASVLMSGLDLERLVLSGGPLGIMQAALDMALDYTHERKQFGKQIGTFQLM 314

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   ++A+ A  + +A + D  K    + A A         +    A  V  EA
Sbjct: 315 QGKLADMYTKLSASRAYVYAVARACDAGKISRRDCAGA-------ILYSSDRAVEVAIEA 367

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +C+GG+GYI +    R  R+S   ++  G+     + +  
Sbjct: 368 QQCLGGNGYINDYPAGRLVRDSRLYTVGAGTQEIRRMLIGR 408


>gi|301512949|ref|ZP_07238186.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii
           AB058]
          Length = 372

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 132/372 (35%), Gaps = 29/372 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWSQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQ-DNHYLLNGAKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAM 450
              I  G+   M
Sbjct: 358 IQRIYGGTNEIM 369


>gi|302551604|ref|ZP_07303946.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469222|gb|EFL32315.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 386

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 154/405 (38%), Gaps = 33/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +Y LS   +EL R       ++ A    G+ +++ EF    + ++R     GL    +  
Sbjct: 2   DYRLSPELEELRRTVEEFAHEVVA-PKIGDFYERHEFP---YEIVREMGRMGLFGLPFPE 57

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  +    L  +    A  L +     A  V    T    ++W P++ S 
Sbjct: 58  EYGGMGGDYLALGVALEELARVDSSVAITLEAGVSLGAMPVYRYGTEAQKREWLPRLCSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMS 240
           E             +    GLTE  GG+D  A  +  +       + ++G K F+++  +
Sbjct: 118 E-------------LLGAFGLTEPDGGSDAGATRTTARLDESTNEWVINGTKCFITNSGT 164

Query: 241 D--AFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D    + +  V GR   G  L+  ++   +  G       +K+G  ++ T EL F++   
Sbjct: 165 DITGLVTVTAVTGRSADGKPLISSIIVPSTTPGFTVAAPYSKVGWNASDTRELSFTDVRV 224

Query: 297 FLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G  + ++IL    +  A ++    +  + E++ Y++ RH  G  +    
Sbjct: 225 PAANLLGEEGRGYAQFLRILDEGRIAIAALATGLAQGCVDESVKYSKERHAFGKPIAANQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+ +    A       A          +EAA A       K     +A     
Sbjct: 285 AIQFKIADMEMKAHTARLAWRDAAVRLVSGAPFKKEAALA-------KLHSSTVAVDNAR 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 338 EATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|326333013|ref|ZP_08199269.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325949207|gb|EGD41291.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 382

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 136/374 (36%), Gaps = 29/374 (7%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLM 152
           D++E        L +++   GL        +  +    + ++R A               
Sbjct: 26  DEIEETDQIPDRLRQQAAAMGLFGYAIPEEYGGLGFTMSEEVRLAMELGWTTPAFRSMFG 85

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +  ++    T R  + + P + S E             +     LTE   G+D +
Sbjct: 86  TNNGIAGQVLVNCGTERQKQQYLPGLASGE-------------LVASFALTEPEAGSDPS 132

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
            + ++  +  D  Y ++G K F+++ + +D  ++ A+      G   +   +      G+
Sbjct: 133 GLRTRAVRAGDA-YVINGQKRFITNAIWADLLMVFARTGDLAEGAKNISVFVVPTDTPGV 191

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVS 326
                 +K+G R + T E+            +      G    M+ L    L  A ++V 
Sbjct: 192 TIGPRDHKMGQRGSVTSEIFLDGVRVPAENLVGEVEGEGFSAAMRSLAKGRLHIAALTVG 251

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                + E++ +A      G  L +  +++  +A+   +  A  A+    A S+D+   R
Sbjct: 252 LADRLIEESLRHATTNSQGGQKLAEFQLIQAMLAESRTEAYAGRAMVLEAARSWDDGSDR 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                       + K +C +    +   A++  GG GY+ E  + R YR++    +  G+
Sbjct: 312 RTA-------PSLCKLFCTEAVDRIADRAVQIHGGLGYMREVPVERFYRDARLFRLYEGT 364

Query: 447 GNAMVLDVLNLLEK 460
                L +   + K
Sbjct: 365 SEIQKLIIAKQMVK 378


>gi|194374263|dbj|BAG57027.1| unnamed protein product [Homo sapiens]
          Length = 678

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 156/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    +++ PK+ S E                   LTE   G+D A+I +     
Sbjct: 212 ILLFGTKAQKEEYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 258

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 259 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 318

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 319 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 375

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 376 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 430

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 431 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 489

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 490 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 548

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    ++ A    A  L +     + + FL  R  D     + M+
Sbjct: 549 HPELSRSGELAVRALKQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 602


>gi|195487186|ref|XP_002091803.1| GE12038 [Drosophila yakuba]
 gi|194177904|gb|EDW91515.1| GE12038 [Drosophila yakuba]
          Length = 627

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 162/413 (39%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 209 ADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 268

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 269 PEKKMGIKASNTAEVYFEDVKIPV---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 325

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 326 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ +  + R  R+     I  G+ 
Sbjct: 386 LEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDTGLERVLRDLRIFRIFEGTN 438

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 439 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 498

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 499 SELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAMV 551


>gi|16080334|ref|NP_391161.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311228|ref|ZP_03593075.1| hypothetical protein Bsubs1_17806 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315555|ref|ZP_03597360.1| hypothetical protein BsubsN3_17722 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320470|ref|ZP_03601764.1| hypothetical protein BsubsJ_17685 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324754|ref|ZP_03606048.1| hypothetical protein BsubsS_17836 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669038|sp|O32176|FADE_BACSU RecName: Full=Probable acyl-CoA dehydrogenase
 gi|2635778|emb|CAB15271.1| acyl-CoA dehydrogenase (FAD dependent) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 594

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 169/482 (35%), Gaps = 62/482 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D +E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    +    K + P + S E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGSEEQKKKYLPGLASGE-------------KIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + +    G
Sbjct: 160 LGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKEFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  I  +A  + A  +  +R    F++    
Sbjct: 276 ASKRVIELSAAYANQRRQFKTPIAGFSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 FTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK  +L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVPSTFLKKALKGELPLFEKAQSLQEELMMLMPEEPGS---- 451

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                     + +++K + +   +KIAL ++  A  + G     +  +     D   + +
Sbjct: 452 ---------GVLEQEKYIVKQ-AKKIALFAAGLAAQKYGKAIDREQEILVNVADIVSNVY 501

Query: 543 CM 544
            M
Sbjct: 502 AM 503


>gi|121638599|ref|YP_978823.1| putative acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224991091|ref|YP_002645780.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121494247|emb|CAL72725.1| Probable acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224774206|dbj|BAH27012.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 386

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LTTAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|149922016|ref|ZP_01910458.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149817181|gb|EDM76661.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 605

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 92/516 (17%), Positives = 174/516 (33%), Gaps = 67/516 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD---KVEFHPAWHALLRRSI 111
              E L   V + T +E  + +      L+A     G + D    V     +      + 
Sbjct: 31  PRYEDLDRDVYATTIEEAYKFSRDVLAPLNAVGDRQGCKLDGEGNVTLPDGYKEAWETAR 90

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D                + +   A +     +  S  +A ++    T  + 
Sbjct: 91  DGGWTAPRADPEIGGSGMPAIIGAYLSEVESAACMAFVMYVGLSTAAARVIKRYCTEDLA 150

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLS 229
              A K+F+ E+  T             + LTE   G+ +    ++        G++ L 
Sbjct: 151 FPVAEKLFTGEWGGT-------------MCLTEAGAGSSVGDNRTKAVPAEGEAGVWLLE 197

Query: 230 GHKWFLSSPMSDA-----FIMLAQVEGRV-GCFLVPRLLED------------GSPNGLC 271
           G K F++   SD       ++LA+  G   G   +   L              G  NG  
Sbjct: 198 GEKIFITGGDSDMVDNICHLVLARTPGSPEGTKGLSLFLVPKYWFSPDDLDALGDRNGAH 257

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +L++K+G   +AT  L   +     G+++G        +  M     L   +  ++  
Sbjct: 258 VLKLEHKMGINGSATCVLGLGSKMPCRGWMVGKEREGMRLMFAMMNEARLGVGVQGLAAG 317

Query: 329 RVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRL 376
             S   A HY   R                  +++ P ++R +    + +    A ++RL
Sbjct: 318 SASFQYARHYVHERIQGTSLKNMRDGDAPRVKIVEHPDVRRMLMTQKVLVETMRAHAYRL 377

Query: 377 ANSFDEAKSRSEEAAYARIM------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  FD A    +E   A+ +       PI K  C  +   V    ++  GG G+ +E  +
Sbjct: 378 ALQFDIADEHPDEDTRAKYLRRAELLLPICKSVCTDLGFDVAVTGVQIFGGYGFTQEFPV 437

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +  R++   SI  G+     LD++   +  +G  LF +     ++   +  +   T   
Sbjct: 438 EQLVRDAKIQSIYEGTNGIQALDLVGRKMRMEGGRLFMEWMQYAKERAAAGAEAGFTAEA 497

Query: 489 DSISLCKEDKGLARFLTEKIALASS----AAALYRA 520
           ++ +   +  G A      +A        AA LY  
Sbjct: 498 EAFNKSIDAVGAA---AMHMAGVGQKDIEAAMLYAV 530


>gi|167621911|ref|YP_001676696.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167351652|gb|ABZ74382.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 590

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/520 (18%), Positives = 174/520 (33%), Gaps = 69/520 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
              +S    E AR A      L+      G R D   V   P + A   +    G     
Sbjct: 34  RDTVSPILAEAARFAEQVLFPLNRQGDEIGARLDDGVVTTPPGFKAAYAQFAAAGWPALS 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               F               +   A L  GH  + +  +A  +    +P +   +   + 
Sbjct: 94  GPTEFGGQGLPSVLNFALYEMIAAACLSFGHYSALTHGAALALEAHGSPALKATYLEPLV 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           +  +  T             + LTE   GTD+  I ++ +   +G + L+G K F++S  
Sbjct: 154 TGRWGGT-------------MCLTESHAGTDLGLIRTRAEPDGEGAFRLTGGKIFITSGE 200

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++ G       +  F+VP+ +       G  N +    +++K+G ++
Sbjct: 201 HDLVENIVHLVLARLPGAPAGVKGISLFVVPKFIPRPDGALGERNAVTCGAIEHKMGLKA 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           +AT  + F    G L+G  +     +  M     L  +         +   A  YAR R 
Sbjct: 261 SATCAMNFDGAVGRLVGQPHRGLQAMFTMMNAERLLLSAQGQGVAETAYQSAAAYARDRL 320

Query: 344 VSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                            +I  P ++R +  +        AL   +  + D A    +  A
Sbjct: 321 QGRAPGDHGEASAHADPIIVHPDVRRMLLTMRAHAEGGRALGLWVMRALDVAARDPDPDA 380

Query: 392 YARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            A        M PI K W    A       ++ +GG G+I E  + +  R++    +  G
Sbjct: 381 RASANALVALMTPIVKVWLSDTASETANLGIQVMGGHGFIREWGMEQLVRDARILQLYEG 440

Query: 446 SGNAMVLDVL---------NLLEKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLC 494
           +     LD++          LL++ T   E      E D  L      +  +LR  +   
Sbjct: 441 ANGIQALDLVARKLPMENGRLLDRLTAPIEAFIREREDDPLLDEFVNPLRRVLRHLLVAA 500

Query: 495 KEDKGLAR--------FLTEKIALASSAAALYRAGMNDIA 526
                  R          T+ + +A  AA  Y      +A
Sbjct: 501 DCIAERGRTDPAEVGAASTDFLKIAGYAALAYLWARMAVA 540


>gi|119610652|gb|EAW90246.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_a [Homo
           sapiens]
          Length = 679

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 213 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 259

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 260 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 319

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 320 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 376

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 377 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 431

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 432 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 490

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 491 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 549

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 550 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 603


>gi|312889455|ref|ZP_07749007.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311298007|gb|EFQ75124.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 596

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/444 (16%), Positives = 153/444 (34%), Gaps = 54/444 (12%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A    P L           +    P    L+ ++   GL        +    +     +
Sbjct: 45  LATEVLPNLERIDA-----QEEGLMP---TLMDKAGELGLLSVSIPEEYGGFGKNFNTSM 96

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             A         A  L + +      +           + PK+ S E+            
Sbjct: 97  LVADAIGAGYSFAVALSAHTGIGTLPILYYGNEEQKAKYIPKLASGEWK----------- 145

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 LTE   G+D  +  ++ +  ++G          W  +   +D F++ A+++   
Sbjct: 146 --AAYCLTEPNSGSDANSGRTKAKLNAEGTHYLITGQKMWITNGGFADVFVVFAKIDDDA 203

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
               +   + + +  G+     ++K+G + ++T ++ F++    +    N+ +      K
Sbjct: 204 ---NLSAFIVEKAFGGISMNPEEHKLGIKGSSTRQVFFNDCPVPV---ENLLSERQNGFK 257

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I +       +     ++   R++L  A+ Y+  R      +     ++  IA++A  I 
Sbjct: 258 IAVNILNIGRIKLGAAAIGSSRMALNYAVKYSNERVQFKLPISKFGAIRYKIAEMATRIY 317

Query: 368 AATALSFRLANSFDEAKSRSEEAAYA------------RIMAPITKYWCCKMAPAVIAEA 415
           A  + ++R   + D+A      +                +   I K W  +M   V+ E 
Sbjct: 318 AVESAAYRAGQNIDDAYEALHASGMDLAKAKLKSTEQFAVECAILKVWGSEMLDYVVDEG 377

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ++  GG GY  E  + R YR+S  N I  G+     + ++++L K       L   L  D
Sbjct: 378 LQVYGGMGYSAEAPMERAYRDSRINRIFEGTNEINRMLIVDMLLK-----RALKGEL--D 430

Query: 476 LGSSGKKVITILRDSISLCKEDKG 499
           L +  + V   L        ED  
Sbjct: 431 LMTPAQAVAGELMAIPDFAAEDDA 454


>gi|256375705|ref|YP_003099365.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255920008|gb|ACU35519.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 383

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 143/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  LS   ++L  +A   T       P   RWD+ E       L+      G        
Sbjct: 2   DLSLSAEHRQLREVAREFTA--DRITPHAARWDRDESID--RDLVPALGKIGFLGIGVPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSR 181
                                       ++S S+   A  +A        + W P + S 
Sbjct: 58  EHGGSGGDHLAYCLVLEELAAGDSAVRGIVSVSLGLVAKTIARAGADAQRERWLPGLCSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        ++     LTE   G+D  ++ +   +++ G        +  +   +D
Sbjct: 118 -------------ALLGCFALTEPDTGSDAGSLAASATRVAGGWRLSGRKVFITNGTWAD 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             ++ A+  G  G   V   L      G   + ++ K+G R  AT EL   +       L
Sbjct: 165 VALVFART-GGPGPRGVTAFLVPTDSPGFTAREIRGKLGMRGQATAELLLDDVPVPDDAL 223

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                +  A   V   R SL  A+ YAR R   G  +    +++  
Sbjct: 224 LGEEGGGFALAMAALDRGRMSVAAGCVGAARGSLEAALRYAREREQFGRPIAGFQLVQEL 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A++  AA  L++R A+  D  +    EA+ A       K +  + +  V   A++ 
Sbjct: 284 LADMAVETDAARLLTWRCADLADRGEPFRTEASMA-------KLYASEASVRVADRAVQV 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG GY+++  +A+H R++   ++  G+     L +   L
Sbjct: 337 LGGYGYLDDHPVAKHLRDTRVTTLYEGTSQIQRLLIGRAL 376


>gi|86137378|ref|ZP_01055955.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85825713|gb|EAQ45911.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 383

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 126/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C      +  V     H+         A L +      S   A  + 
Sbjct: 44  RDTWNQAGDLGLLCPSIPEEYGGVGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYIL 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W PK+ S E             +   L +TE   G+D+  I ++  +  +
Sbjct: 104 EYGTEEQKKRWLPKMISGE-------------LVGALAMTEPSTGSDVQRIKTKAIRDGN 150

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGN 281
             Y LSG K F+++      I + A+ +  +G   V  + LE     G    R   K+G 
Sbjct: 151 A-YRLSGQKTFITNGQHANLILVAAKTDPSLGSKGVSLVALETDGAEGFARGRNLEKVGM 209

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F N        L      G  + M+ L    L  A  +V  M  ++A  I 
Sbjct: 210 HAADTSELFFDNVEIPPENILGQEEGKGFYQMMQQLPQERLIIACGAVGAMEGAVARTIA 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  + +       A A         DE      +       A
Sbjct: 270 YCKEREAFGGPLTQFQNTRFKLVECLTKTKVARAF-------LDECMVEHLKDELTVEKA 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW       V+ E ++  GG G+++E ++A  + ++    I  G+   M   +   
Sbjct: 323 AMAKYWITDTQGEVLDECLQMHGGYGFMQEYAVAEMWTDARVQRIYGGTNEIMKELIGRS 382

Query: 458 L 458
           L
Sbjct: 383 L 383


>gi|260770182|ref|ZP_05879115.1| putative acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
 gi|260615520|gb|EEX40706.1| putative acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972]
          Length = 389

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 136/387 (35%), Gaps = 32/387 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P   + D     P    L       GL     D +     +   AH +    +   
Sbjct: 29  EHIAPLAAQIDHDNQFPVH--LWPLFGDMGLLGVTVDEACGGAEMGYLAHVLAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +      +  + + PK+    +                L ++
Sbjct: 87  SASVGLSYGAHSNLCVNQLFRNGNAKQRETYLPKLLDGSW-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + ++  D         W  + P +   I+ A+ +       +   + 
Sbjct: 134 EPNAGSDVVSMQLKAERQGDHFVLNGSKMWITNGPDAQVVIVYAKTDPNAKSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    +  +K+G R + T EL F N       +LG+LN     +        +  
Sbjct: 194 ERDFPGFYSAQKLDKLGMRGSNTCELVFENCHVPTENILGELNQGIEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+   + AA A  + +AN+ 
Sbjct: 254 AAGPLGIMQACLDLVLPYVHDRKQFGHAIGEFQLVQAKVADMYTRLNAARAYVYAVANAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   +++A           +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGEVTRKDSAG-------VILYAAELATQMALDAIQLLGGNGYINEFPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            I  G+           +  G  LFE+
Sbjct: 367 EIGAGTSEI------RRILIGRELFEE 387


>gi|218289265|ref|ZP_03493500.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240613|gb|EED07793.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 533

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 121/514 (23%), Positives = 215/514 (41%), Gaps = 49/514 (9%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N +S D +L  ++ +F         +L   G        + +  + +   P L  +  
Sbjct: 9   GTNHFSQDIVLQDVLRHFWPQFEAHEADLTRFGSIAGREVYETVYHVDHDAPPVLVQHNL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G+R D+V   P+  ALL+                 P     +     A  YL+      
Sbjct: 69  DGKRIDRVRLSPSHLALLKALA----------FINRPPYEGDSWHHHFAYGYLIGDPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +          +W   + S                     +TE +GG+
Sbjct: 119 CVLTITQQVAYAIHKYAPE--FAEWKEALLSG-------------RAFGATWMTEVQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG------CFLVPRLL 262
           D+ A  +  +     ++ L+G K+F S   ++D  I  A+ EG          FLVPRL 
Sbjct: 164 DLGANQTTARFDG-EVWRLTGDKYFASGAGLTDYAIATARPEGAPSGPKGLALFLVPRLR 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG+ N    +RLK+K   R+  + E+EF++T  FL+GD ++      +   +  L +A 
Sbjct: 223 RDGNLN-FHVRRLKDKSATRAVPSGEVEFADTEAFLIGDPHLGIYYTLENLTVSRLANAA 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E +H  R R   G +L +  +++R + D A+  A   AL+F   + FD+
Sbjct: 282 GAMGIAQKALLEVMHRVRHRRSFGHVLHEHALIRRDLTDFAVRHAGGLALTFHAIDLFDQ 341

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       S +   AR+   + K      A  + A AME  GG G++EE +IAR +RE+ 
Sbjct: 342 AWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYAIARWHREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
              I  G  N   LD L  L K  N   + +++ + L       G+ V++ +R  ++  +
Sbjct: 402 ITPIWEGPSNIQALDFLETLMKLGNVDDVIDRIAAPLACRSVPGGRVVVSRVRQEVTALR 461

Query: 496 -----EDKGLARFLTEKIALASSAAALYRAGMND 524
                E +  ++ +   +A  + AA+LYR     
Sbjct: 462 ALPRPEAEWQSKSVLRTVADLAQAASLYRLAETA 495


>gi|77735757|ref|NP_001029573.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
 gi|122144069|sp|Q3ZBF6|ACADS_BOVIN RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|73587179|gb|AAI03366.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Bos taurus]
          Length = 412

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 138/376 (36%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHRFPA--AQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   T    + W              AP           L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGTKEQKQQWV-------------APFTSGDKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL   + ++K+G R+++T  L F +        L     G    M+ L    +  A  +
Sbjct: 220 PGLTLGKKEDKLGIRASSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQA 279

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  A+ YA  R   G  L     ++  +AD+AL + +A  L++R A   D  K
Sbjct: 280 LGIAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKK 339

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAA A++ A        + A A+  +AM+ +GG GY++E    RHYR++    I  
Sbjct: 340 PFTKEAAMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYE 392

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 393 GTSEIQRLVVAGHLLK 408


>gi|319953889|ref|YP_004165156.1| isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319422549|gb|ADV49658.1| Isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 389

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 15/352 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +     +  +  +   +  K     L L   +     +    +     A+     +
Sbjct: 38  IERFIWAKFGEMGYFGLATPE--KDGGLELDLFYTVIFLEELQKINSGGFAAAMWAHAYL 95

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 K    E       P         L ++E  GG+D+A + +  +K  D  Y ++G
Sbjct: 96  AMTHLNKEADDELKKQYLTPSVLGEKIGCLCISEPFGGSDVAGMLTTAEKKGD-TYVING 154

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++ +  D  I+ A+    +G   +   L D    G+   +L NK+G R++ T E+
Sbjct: 155 SKTFITNGVYCDYMIVAAKTNSELGNKGISIFLIDKKTPGVSATKL-NKLGWRASDTGEI 213

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N       L+G+ N     + +   L  L   I + +    +L  A+ Y   R   G
Sbjct: 214 AFDNVTIPASNLMGEENKGFSYIMEHFALERLIMGINAHARAEYALDYALQYMSERQAFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++    ++  D+      ++ +A   ++ +   +E       A I+K    K
Sbjct: 274 KTIDKYQALRHRFVELQADMEMCREYNYLVAYRLNKGEYVVKE-------ATISKLKSTK 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           MA  VI + ++ +GG GY+E+  +AR  R+S    I  G+   +   +  ++
Sbjct: 327 MADEVIYDCLQFLGGYGYMEDYPLARLLRDSRLGPIGGGTSEILKEILAKIM 378


>gi|313222482|emb|CBY39392.1| unnamed protein product [Oikopleura dioica]
 gi|313225130|emb|CBY20923.1| unnamed protein product [Oikopleura dioica]
          Length = 403

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 135/376 (35%), Gaps = 27/376 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           GP    WD    +P    +++ S   G            +   +              + 
Sbjct: 47  GPFSAEWDAKCHYPI--DVIKSSAEQGFLGLYTSEDVGGMGLSRLETSIVVEALSEHCVP 104

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +M+     + M+ +  TP   +++ P++ S E             +     LTE   
Sbjct: 105 TTAMMTIHNMVSWMIDVNGTPEQREEYCPRLTSGE-------------IIGSYCLTEPGS 151

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D +A+ +   +  D  Y L+G K F+S   + D + ++ + +    G   +  +L   
Sbjct: 152 GSDASALATTCVRDGDD-YVLNGSKCFISGAGVHDLYAVMVRTDPATKGPKGISCVLIPK 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              GL +   + K+G +S+ T  L   N       LLG                 ++ A 
Sbjct: 211 DTPGLSFGADETKMGWKSHPTKVLIMENCRVPVSNLLGVEGKGFNIAMSGLNGGRVNIAS 270

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+ G + ++  A  +   R   G  L  Q  ++  +A++A  +  +  +    A + D+
Sbjct: 271 CSLGGAQKAMLAAKEHLGVRKAFGKTLDSQQYLQYKMAELATQLVTSRLMVRHAAAAIDQ 330

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                     A  +  + K         V    ++  GG GY+++    +  R+   +SI
Sbjct: 331 KDPA------AASLCAMAKLHATDNCSEVANGCLQMFGGYGYLKDYPCEQIVRDLRVHSI 384

Query: 443 LLGSGNAMVLDVLNLL 458
           L G+   M L +   L
Sbjct: 385 LEGANEVMRLIISRQL 400


>gi|221067817|ref|ZP_03543922.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712840|gb|EED68208.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 384

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 148/412 (35%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             +  E++   E V     +EL       +P +  +   G       F P      R   
Sbjct: 10  DWMDAEIDAFREQVRRYIEREL-------SPHVPNWRAQG-------FVP--RETWRGFG 53

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D  +       A+++       + + E   + S    +A  +    TP   
Sbjct: 54  AHGFLLPEMDEQWGGGGGNLAYQLVVQEE--LTKAEIHAITSVHTITAHYLDTYGTPEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E             +  G+ +TE   G+D+ A+ ++ Q+  D  Y ++G 
Sbjct: 112 QRWLPKLCSGE-------------LLAGIAMTEPSVGSDLKAMRTRAQRDGDH-YVINGS 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  +   +++A   G  G   V  ++ E  +  G    R   KIG   + T EL 
Sbjct: 158 KTFITNGCTANLLVVAVRTGEAGSAGVSLVVLETENLPGFRVGRRLGKIGQHISDTAELF 217

Query: 291 FSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L G        +        +   + + + + +++A  + Y ++R   G
Sbjct: 218 FEDLNIPASHLLGGIEGQGFKQLMSQLPYERMLLGVSAAAAIEMAVALTVDYTQQRKAFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D    +  +A+ A       +          +    +E A  A+        WC +
Sbjct: 278 QTIADFQNTRFKLAECATTAHVVRSFVNDCIQRLLDGTLENEAAYMAKW-------WCSE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ E ++  GG GY+EE  I R Y ++    I  G+   M   +   L
Sbjct: 331 QQCKVMDECLQLFGGYGYMEEYPIGRMYADARIQKIYGGANEIMKDLIARRL 382


>gi|85703464|ref|ZP_01034568.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85672392|gb|EAQ27249.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 600

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/525 (17%), Positives = 181/525 (34%), Gaps = 47/525 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            V +    E  RM       L         R +   V   P +    R     G      
Sbjct: 63  DVTAAILSEAGRMCEEVLYPLQRKGDLHPARLENGVVRTSPGYAEGYRAIADGGWVSISA 122

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +            +   A L        +      +    +  +   + PK+ S
Sbjct: 123 HPDHGGMGLPMTVTAAVNEMMSSACLSLQLNPLMTQGQIEALEHHASDELRAVYLPKLVS 182

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+ A+ S+ +  +DG Y ++G K ++S   +
Sbjct: 183 GEWSGT-------------MNLTEPQAGSDVGALRSKAEADADGTYAITGQKIYISWGDN 229

Query: 241 DA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ + D     G  N L    L++K+G   +
Sbjct: 230 DFTENVCHLVLARLPDGVQGTKGISLFLVPKFIPDESGNPGKQNSLKVVSLEHKMGLHGS 289

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  +++    G+L+G  +     +  M     L      +     +   A+ YA  R  
Sbjct: 290 PTAVMQYDRATGWLVGKPHDGMRAMFTMMNNARLGVGGQGIGVAEGAYQHALAYAMDRKQ 349

Query: 345 SGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARI 395
                      +I+   ++R +A +  DI AA A++   A + D   S  +   ++ A  
Sbjct: 350 GRTPSEAGTGSIIEHADVRRMLATMKADIFAARAIALACAQAIDMQTSTGKAHWSSRAAF 409

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV- 454
           + PI K +      A+    ++  GG G+IEE   A++YR+    +I  G+     +D+ 
Sbjct: 410 LTPIAKAFGTDTGIAMAEMGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQAMDLA 469

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL---- 510
              L  G      +   +E    ++   +  +        +  +    ++  +  L    
Sbjct: 470 ARKLMDGGEAAHAILDEIEAQAETARSSLPGLAEPVWQASETLRETVEWMLGQKDLNHRF 529

Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           A +A  L        A   L+    +        L  RF    ++
Sbjct: 530 AGAAPFLRGFARVLGAHFHLKAALAEGGDGPRTRL-ARFYIMRLL 573


>gi|91791072|ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
 gi|91700953|gb|ABE47124.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
          Length = 381

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 135/376 (35%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    W++    P   A+LR+    G     +D  +        +    A     +    
Sbjct: 28  PQAAPWEEQGMVP--RAVLRKMGELGYLGIRYDEQYGGSKLDTVYSAILAEELGRSTFGG 85

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +M  +  ++  +A   +P   + + P I   E                 + +TE  
Sbjct: 86  FAVTVMVHTDMASPHLANFGSPEQLQRYLPPIIRGE-------------KICAVAVTEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
            G+D+A I ++  +  D         +  +    D + + A+ +    G   +   + + 
Sbjct: 133 AGSDVAGIRTRAVREGDEWVINGSKMFITNGVQGDVYFVAAKTDPTAKGSRGISIFIVEK 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  NK G   + T EL F N       LLG+ N     +        +    
Sbjct: 193 GTPGFRVGRALNKSGWLCSDTAELVFENCRIPAANLLGEENKGFYQIMRNFQNERMVLGA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     ++   + Y R R   G  L D+  +++ +A  A  +AAA  L +  A    +
Sbjct: 253 QTMGEAARAIELTLDYVRERKAFGATLWDKQAIRQRLAMRASQVAAARQLVYHAAWLDAQ 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +E +  + +       C  +   V+ +  +  GG GY+ E +I R  R++   +I
Sbjct: 313 GRECVKEVSMVKAL-------CGNLVNDVVYDCQQFHGGFGYMREAAIERMVRDARVQAI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+ +V   L
Sbjct: 366 GGGATEVMLEEVAKRL 381


>gi|115497690|ref|NP_001068703.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
 gi|122144044|sp|Q3SZB4|ACADM_BOVIN RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|74267842|gb|AAI02990.1| Acyl-coenzyme A dehydrogenase, C-4 to C-12 straight chain [Bos
           taurus]
 gi|154163111|gb|ABS70460.1| C-4 to C-12 straight chain acyl-coenzyme A dehydrogenase [Bos
           taurus]
 gi|296489201|gb|DAA31314.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Bos taurus]
          Length = 421

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 130/377 (34%), Gaps = 34/377 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +DK   +P    L++R+   GL  +    S   +          +          
Sbjct: 62  PLAAEYDKTGEYPV--PLIKRAWELGLMNTHIPESCGGLGLGTFDSCLISEELAYGCTGV 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +      V +    +  K +  ++              +  +     +TE   G
Sbjct: 120 QTAIEANSLGQMPVIIAGNDQQQKKYLGRMT-------------EEPLMCAYCVTEPVAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+A I ++ +K  D         W  +   ++ + +LA+ +              + + 
Sbjct: 167 SDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEA 226

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G+   R +  +G R + T  + F +         NV  G     KI +         
Sbjct: 227 DTPGVQIGRKELNMGQRCSDTRGIVFEDVRVP---KENVLIGEGAGFKIAMGAFDKTRPP 283

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +V   + +L EA  YA  R   G +LI+   +   +A++A+ +  A     R A  
Sbjct: 284 VAAAAVGLAQRALDEATKYALERKTFGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWE 343

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  +         A I K +   +A  + ++A++  GG+G+  E  + +  R++  
Sbjct: 344 VDSGRRNT-------YYASIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKI 396

Query: 440 NSILLGSGNAMVLDVLN 456
             I  G+     L +  
Sbjct: 397 YQIYEGTAQIQRLIIAR 413


>gi|221639593|ref|YP_002525855.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221160374|gb|ACM01354.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 379

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 80/400 (20%), Positives = 141/400 (35%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q +  MA     +     P    W++    P    L  +    GL       
Sbjct: 2   DFALSEEQQAIFDMARAFGAE--EIAPHARAWEEAGTIP--RTLWPKVAELGLGGVYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S     A M+    +  +   W P I S  
Sbjct: 58  DHGGSGLGRLDATLVFEALAMACPSVAAFLSIHNMCAGMIDRYGSDELKARWLPGICS-- 115

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                       +  +   LTE   G+D AA+ ++ +   +G Y LSG K F+S    SD
Sbjct: 116 -----------LTTLVSYCLTEPGAGSDAAALRTRAEAAPEG-YRLSGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           A++ + +  G  G   +  LL      GL +  L++K+G R+  T +++F         L
Sbjct: 164 AYLTMCRT-GGAGPKGISTLLVPAGTPGLSFGGLEDKMGWRAQETRQVQFDECLVPTDLL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  ++ G + +      Y   R   G  L     ++  
Sbjct: 223 VGEEGRGFAYAMAGLDGGRLNIAATALGGAQAAFDATRAYMAERRAFGQRLDGFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ + +  A     + A   D+       A  A     + K      A  V  + ++ 
Sbjct: 283 LAEMEVKLQQARIFLRQAAWKLDQG------ALDATKFCAMAKLAVTDSAFEVANQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + V   L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|323136899|ref|ZP_08071979.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397660|gb|EFY00182.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 597

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 101/540 (18%), Positives = 191/540 (35%), Gaps = 86/540 (15%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH-------PAWHALLRRSIHDGLH 116
            V +    E  ++       L      G+               P + A        G  
Sbjct: 36  DVAAQILSEAGKLCEE---VLTPLNQSGDAVGCTRKPDASVAAPPGFKAAFDAYAQGGWI 92

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDW 174
                  +          +  +     +       M P +T  ++ AL    +    + +
Sbjct: 93  GLPVPEEYGGQGLPYTLTMPMSEF--ASSANMAFAMYPGLTQGALAALLTHGSDEQKRLY 150

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
           APK+    +  T             + LTE + GTD+  +T++    +DG Y ++G K F
Sbjct: 151 APKMTEGRWTGT-------------MNLTEPQCGTDLGLLTTKAVPRADGSYSITGQKIF 197

Query: 235 LSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNK 278
           +S+   D       ++LA++EG       +  F+VP++L +     G+ NG+    ++ K
Sbjct: 198 ISAGEHDLAENIIHLVLARIEGAPAGVKGISLFIVPKILVNPDGSLGARNGVACGSIEEK 257

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G   NAT  + +    GFL+G+ N     +  M     L  A+  +S   V+   A+ Y
Sbjct: 258 MGIHGNATCVMNYDGAQGFLVGEANRGLNAMFVMMNEARLGVAVQGLSQSEVAYQNAVAY 317

Query: 339 ARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSF 380
           AR R                  +I  P ++R + +I     AA  L+        +A+  
Sbjct: 318 ARERLQGRALTGPKNPGKNADPIIVHPDIRRMLLEIRSFNEAARGLALAAALDSDIAHRS 377

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +R        ++ P+ K     +      +A +  GG GYI E  + +  R++   
Sbjct: 378 DDPAARQAAEDRLGLLTPVLKGVFTDVGFDNAVKAQQVFGGHGYIREWGMEQFVRDARIA 437

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
            I  G+     LD++                L +D G +         + +     D+ +
Sbjct: 438 MIYEGANGIQALDLVG-------------RKLPRDGGRAIMAYFKDSAEFLGSLSGDEAM 484

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
             F+T      S+ A L +A M  + +  +     DN           ++  H+   + L
Sbjct: 485 KPFVT---PAQSALADLQKATMWLMQNA-MAK--PDNAG------AASYDYMHLFGRVAL 532


>gi|326383153|ref|ZP_08204842.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198289|gb|EGD55474.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 386

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 134/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQL 146
           P G   D+ +   P    + R++   G+   +    +              +  L     
Sbjct: 32  PRGREVDEADTVTPV--DIFRKAAEVGIADFMIPTEYGGGGMTDVFTQCLVQEELCWGDP 89

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G+L+  +   +  + ++ T    + W P                K +V   L  TE  
Sbjct: 90  GIGNLVCSNGFFSDPLLVLGTEEQKRKWLPPTTG------------KDAVMTALATTEPG 137

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A+I +   K+  G        W  ++  +  +++ A+ +       V   +    
Sbjct: 138 SGSDAASIITSATKVDGGYRINGQKAWISNAGAAQQYVVFAKTDKTKRSGGVTAFMFTKD 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+ +     K+G R+    E+ F + F      LG+       +     +  +     
Sbjct: 198 TPGVSFGEPMKKMGQRAIVCREVFFDDMFVPDEDRLGEEGQGFYGLMGTFDISRVVLGAA 257

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   R +   A++YAR R   G  +I+   +   +A++A  I +A  L    A   D  
Sbjct: 258 AVGAARAAYEYALNYARERKQFGVPIIEHQAVAFRLAEMATRIESARLLVHHAARVIDSG 317

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        A  +A + K    + A  V   A++ +GG GY  E  + +  R+     I 
Sbjct: 318 Q-------RATGIAAMCKLQASETAMFVTHAAVQTLGGWGYSREFPVEQWMRDVKLEEIE 370

Query: 444 LGSGNAMVLDVLNLLE 459
            G+ + M L +   L+
Sbjct: 371 EGTSDIMKLVISRNLD 386


>gi|269124719|ref|YP_003298089.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309677|gb|ACY96051.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 387

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 134/401 (33%), Gaps = 30/401 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   +E   +A       +   P     D+ +   A   L  ++   GL   +    + 
Sbjct: 11  LTDEQREFVALARDFAR--NEIRPRAREVDEADT-EAPMDLWYKAAEVGLTSYMLPAEYG 67

Query: 126 PVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                        +  L    +   + ++ S   A  +  + T    K W   +   E  
Sbjct: 68  GGGVTDLVTQCLVQEELCHGDIGIANFLTSSSFFADPILELGTEEQKKKWITPLTGSEPP 127

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          + +TE   G+D A + ++  +  D         W  ++P+S  F+
Sbjct: 128 ------------VTSVAVTEPGVGSDAAGLQTRAVRDGDHYVLNGVKTWISNAPLSQYFV 175

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A V+       V   L +    G+       K G R     E+   N    +   L  
Sbjct: 176 VFATVDPSKRARGVTAFLVERDREGVTVGAPMKKYGQRGTLNAEVFLENVRVPVENRLGE 235

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAI 359
                  +  +   D++ + +           L +A+ YA+ R   G  +I+   +   +
Sbjct: 236 EGKGFYGL--MRTFDASRILIGAAATGLSRAILEDAVQYAKERTQFGKPIIEHQAVAFRL 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A     +  ++ R A  FD  K  +  +A A+++A     W       V    +   
Sbjct: 294 ADMAAKTDISHLVTMRAARLFDAGKPVTAASAIAKVVASENTTW-------VANAGLLTH 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  E  + +  R++    +  G+ +   L +   L K
Sbjct: 347 GGWGYSREFMVEKWLRDAKLEELEEGTSDIQRLIISRSLAK 387


>gi|111020337|ref|YP_703309.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819867|gb|ABG95151.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 137/373 (36%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +           +  +      +     M     
Sbjct: 35  EYPEKWIEQMK---QIGIYGLAVPEEYGGSPVSMPCYAQVTQELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T    + + P++ + E   T             + LTE  GG+D+ A+++ 
Sbjct: 92  VAKLLSLYGTEEQKRQYLPQMATGEIRAT-------------MALTEPGGGSDLQAMSTN 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +   D +       W  ++  S    +L + +         +  +L +  P GL   R 
Sbjct: 139 AKTDGDDLVISGSKTWISNARRSGLIALLCKTDPGASPKHKGISIVLVEHGP-GLTVSRD 197

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   T EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 198 LPKLGYKGVETCELSFDNYRISSDAVLGGTPGKGFAQMMKGLETGRIQVACRALGVATAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D       EA 
Sbjct: 258 LEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDSGDRCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLYASEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLLEKGTNL 464
             +++ L     L
Sbjct: 371 NVIVSQLVSRGGL 383


>gi|134117393|ref|XP_772923.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255541|gb|EAL18276.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 420

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 139/377 (36%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P    +L+ +   GL  +    ++             +          
Sbjct: 62  PQAAEYDRTMEYP--WPILKEAHSLGLLNTHIPEAYGGPELGLLECAIISESLAFGCSGI 119

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M  +  + + + +  +    + +  ++              +  +     +TE   G
Sbjct: 120 QTAMEANGLAEAPLIVAASHEQKRKYLGRMT-------------EEPLMAAYCVTEPGAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           +D+A I ++ +K  D         W  ++  ++ F +LA  +        +   + D   
Sbjct: 167 SDVAGIKTRAEKKGDKWVLNGSKMWITNAGHANWFFVLAITDPEASPSRGMTGFIVDADT 226

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI---- 322
           +G+   + +  +G R++ T  + F +       + NV   P E  KI +   D       
Sbjct: 227 DGIILGKKEINMGQRASDTRMVTFEDVIVP---EENVLGSPGEGFKIAMKAFDITRPLVS 283

Query: 323 -MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L EA  YA+ RH  G  +I+   +   +AD+A+ + AA  L ++ A + D
Sbjct: 284 AAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVEAARGLVWKAAWAKD 343

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +         A + K +  K A       ++  GG+G+  E  + + YR++    
Sbjct: 344 CRQRNT-------FYASMAKAFAGKTAVENANLGVQVFGGAGFNTEMPMEKLYRDAKIYE 396

Query: 442 ILLGSGNAMVLDVLNLL 458
           +  G+     L V   L
Sbjct: 397 LYEGTSQIQKLIVSKHL 413


>gi|15609861|ref|NP_217240.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium tuberculosis H37Rv]
 gi|148662565|ref|YP_001284088.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra]
 gi|148823912|ref|YP_001288666.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11]
 gi|167970053|ref|ZP_02552330.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis H37Ra]
 gi|218754459|ref|ZP_03533255.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|219558732|ref|ZP_03537808.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|253798195|ref|YP_003031196.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435]
 gi|254551779|ref|ZP_05142226.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201848|ref|ZP_05769339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289444266|ref|ZP_06434010.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289553492|ref|ZP_06442702.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605]
 gi|289570900|ref|ZP_06451127.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|289762895|ref|ZP_06522273.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|297635331|ref|ZP_06953111.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207]
 gi|297732327|ref|ZP_06961445.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN R506]
 gi|306777002|ref|ZP_07415339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001]
 gi|306780905|ref|ZP_07419242.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002]
 gi|306785530|ref|ZP_07423852.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003]
 gi|306790126|ref|ZP_07428448.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004]
 gi|306794210|ref|ZP_07432512.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005]
 gi|306798628|ref|ZP_07436930.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006]
 gi|306807476|ref|ZP_07444144.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007]
 gi|306968782|ref|ZP_07481443.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009]
 gi|306973117|ref|ZP_07485778.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010]
 gi|307080826|ref|ZP_07489996.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011]
 gi|307085418|ref|ZP_07494531.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012]
 gi|313659660|ref|ZP_07816540.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2292958|emb|CAB10900.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium tuberculosis
           H37Rv]
 gi|148506717|gb|ABQ74526.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra]
 gi|148722439|gb|ABR07064.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11]
 gi|253319698|gb|ACT24301.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435]
 gi|289417185|gb|EFD14425.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46]
 gi|289438124|gb|EFD20617.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605]
 gi|289544654|gb|EFD48302.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17]
 gi|289710401|gb|EFD74417.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503]
 gi|308214659|gb|EFO74058.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001]
 gi|308326305|gb|EFP15156.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002]
 gi|308329834|gb|EFP18685.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003]
 gi|308333477|gb|EFP22328.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004]
 gi|308337472|gb|EFP26323.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005]
 gi|308341144|gb|EFP29995.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006]
 gi|308346071|gb|EFP34922.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007]
 gi|308353669|gb|EFP42520.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009]
 gi|308357516|gb|EFP46367.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010]
 gi|308361469|gb|EFP50320.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011]
 gi|308365064|gb|EFP53915.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012]
 gi|328457968|gb|AEB03391.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207]
          Length = 386

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|284045673|ref|YP_003396013.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283949894|gb|ADB52638.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 400

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 141/389 (36%), Gaps = 41/389 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E +D  +  P    ++ +    GL        +  +                  +  
Sbjct: 28  PNAEHYDHADEFPE--PIVEQMKELGLFGVTIPEEYGGMGLDLTTYAMIVEELSRGWISI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     + ++         + + P++ + E                   L+E   G
Sbjct: 86  SGVINTHFIGSYLLMKFGNDEQKQKYLPRMATGEIR-------------AAFSLSEPELG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG--RVGCFLVPRLLED- 264
           +D+AAI +  +K+ DG Y ++G K ++++ + SD   +L + +         +   + + 
Sbjct: 133 SDVAAIKTAAKKLDDGAYEINGQKMWVTNGLRSDLVFVLVKTDPNAEKAHRGMTCFIAEK 192

Query: 265 --------GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPV 309
                   G   GL       K+G +   + EL F        N  G     LN     +
Sbjct: 193 EGGVAENTGDFRGLIVPPQLKKMGYKGVESTELVFDGYRCPAENILGGEAAGLNKGFAQM 252

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            D   L  ++ A   V   + +L  A+ Y++ R   G  +     ++  +AD+A  + AA
Sbjct: 253 MDALELGRVNVAARGVGIAQRALELALRYSQERKTFGKPIAQHQAIQFKLADMATQVDAA 312

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L+ R A   D  +    EA  A++ A     +C +       E+    GG GY +E  
Sbjct: 313 RLLTNRAARMKDAGERSDIEAGMAKLFASEAGRFCVE-------ESFRIHGGYGYSKEYE 365

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I R YR++P   I  G+     + +   L
Sbjct: 366 IERLYRDAPLLLIGEGTSEIQRMVIGKKL 394


>gi|126432784|ref|YP_001068475.1| butyryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126232584|gb|ABN95984.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 385

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 134/368 (36%), Gaps = 30/368 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+  AW   ++R    G++      S+       A  +   +      +     M     
Sbjct: 35  EYPEAWIEQMKR---IGIYGLAIPESYGGSPVSTACYVEVTQELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++ L  T    + + P + + E   T             + LTE  GG+D+  +T+ 
Sbjct: 92  VAKLLTLFGTEEQKRAYLPGMATGEIRAT-------------MALTEPGGGSDLQNMTTT 138

Query: 218 GQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQR 274
                 DG+       W  ++  S    +L + +         +  +L +    GL   R
Sbjct: 139 ALPCEGDGLVVNGSKTWISNARRSGLIALLCKTDPAATPRHKGISVVLVEQGTTGLSVSR 198

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRV 330
              K+G +   + EL F +    +   L      G  + MK L    +  A  ++     
Sbjct: 199 DLPKLGYKGVESCELVFDDCRVPVTAILGGEPGRGFAQMMKGLETGRIQVASRALGVATA 258

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA
Sbjct: 259 ALEDALRYAQERESFGQPIWKHQSIGNYLADMATKLTAARQLTRYAAERYDSGERADMEA 318

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+    
Sbjct: 319 GMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQ 371

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 372 RNVIAAQL 379


>gi|119714508|ref|YP_921473.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535169|gb|ABL79786.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/408 (17%), Positives = 140/408 (34%), Gaps = 37/408 (9%)

Query: 63  EYVLSCTAQELARMANY-NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
             + +  A +L  +       +L       E     E  P    +       GL    + 
Sbjct: 5   RLLPTDEAVDLIALVRQIAAEELAPRSAEAE---ATETFP--RDVFAMLGRTGLLGLPYP 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                  +     ++            G  +S    S   +A   T     +W P +   
Sbjct: 60  EQHGGGGQPYEVYLQVLEEVGAVWASIGVGISVHALSCFGLATAGTAAQQAEWLPAMLGG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +     L+E   G+D AA+ ++ ++  D         W      +D
Sbjct: 120 E-------------LLGAYCLSEPHAGSDPAAMRTRARRDGDEYVLNGAKAWTTHGGHAD 166

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            + ++A+   + G   +   L      GL     ++K+G   +AT  + F +        
Sbjct: 167 FYKVMARTGDQRGD--ISCFLVPADTPGLSADPPEHKMGLTGSATATMRFDDVRIPA--- 221

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
             +  G  + +KI L  LD+  + ++ +   LA+     A+ YA+ R   G  +ID   +
Sbjct: 222 ERLLGGEGDGLKIALAGLDAGRLGIAAVATGLAQGALDRAVAYAQERETFGRRIIDHQGL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+   + +A A +   A   D       E       A + K      A  V  +A
Sbjct: 282 AFVLADMEAAVQSARATTLHAARLKDAGLPYGRE-------ASVAKLVATDNAMRVTTDA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           ++ +GG GY  +  + R+ RE+    I  G+     + +   L++ T 
Sbjct: 335 VQVLGGYGYTRDFPVERYMREAKVMQIFEGTNQIQRMVISRALDRSTA 382


>gi|169630123|ref|YP_001703772.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242090|emb|CAM63118.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 384

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 25/297 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                   W P   S E             +   + +TE   G+D+  I ++  K  D  
Sbjct: 109 ANDEQKARWFPGFCSGE-------------LISAIAMTEPGTGSDLQGIKTRAVKDGDH- 154

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++ + +D  I++AQ +   G      ++ +    G    R  +K+G  + 
Sbjct: 155 YILNGAKTFITNGINADLVIVVAQTDPEKGALGFSLIVVERGMEGFERGRKLDKVGLDAQ 214

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F++        L     G +  MK L    +  A+M+ + M   L E I Y   
Sbjct: 215 DTAELSFTDVRVPAANLLGEEGQGFIYLMKNLPQERMSIAVMAAAAMESVLEETIAYTTE 274

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++A D      +     +  ++ +   E+AA A+       
Sbjct: 275 RKAFGKPIKSFQNSRFLLAELATDATVIRVMVDEFISLLNKEELSVEQAAMAKW------ 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  +    +I   ++  GG G++ E  +AR Y +S   +I  G+   M   +   L
Sbjct: 329 -YSTEKQVHLIDRCLQLHGGYGFMREYPVARAYMDSRIQTIYGGTTEIMKEIIGRSL 384


>gi|119505099|ref|ZP_01627175.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459081|gb|EAW40180.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 587

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 97/554 (17%), Positives = 188/554 (33%), Gaps = 48/554 (8%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG- 88
               M     D +   +     S+       +G  + +    E  ++ +     L   G 
Sbjct: 5   PLADMQFLIDDVI--DVAEKLGSLERFREMGVGPDLTTALLDEAGKLGSDVVAPLRRVGD 62

Query: 89  --PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P      KV   P +   +R     G      D         + +   A+ ++  A +
Sbjct: 63  THPVTCVDGKVNIPPGYGEAIRELGAGGWVGISADADAGGQGLPEIYGTAASEIWNGADM 122

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S  +A  ++   +  +   +  KI S E+  T             + LTE  
Sbjct: 123 AFALEPFLSSGAALAISAHASDALKAIYLAKINSGEWSGT-------------MNLTESG 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            G+D+  + ++ ++  D  Y + G K +++    D       ++LA++         +  
Sbjct: 170 AGSDLGPVKTRAERDGD-RYRIFGQKIYITWGDHDATDNIVHLVLARLPDAPAGSKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTG 307
           F+VP+ L +     G  N       ++K+G   + T  + +       G+L+G+ N    
Sbjct: 229 FIVPKYLVNADGSLGERNDAFPVSTEHKLGIHGSPTCVMAYGDKDGAIGYLVGEENNGLA 288

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +  M     L   +  V     +  +A+ YAR R   G  +I+   +KR +  +   I 
Sbjct: 289 CMFTMMNEARLKVGLQGVGASEGAYQKAVAYARERVQGGVAIIEHADVKRMLMTMRALIE 348

Query: 368 AATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  AL++  A + D     EA  +SE+     +M P+ K WC ++   + +  ++  GG 
Sbjct: 349 AMRALAYNEAVTMDLAHYAEADVKSEQRQRIDLMIPVIKGWCTEIGVELTSLGVQVHGGM 408

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+IEE   A++ R+     I  G+       L    L   G +  E + + + +      
Sbjct: 409 GFIEETGAAQYLRDVRITPIYEGTNGIQAADLVNRKLARDGGSGMEAMQTQIAELTQQLL 468

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN-RFLDNCH 539
           +     L              R  TE   L    ++          D  ++         
Sbjct: 469 QSSHPELGALGKSLASALADHRVTTEH--LLGQMSSDRFNAFGGAFDYLMQTGYLFGGWQ 526

Query: 540 STHCMLHGRFNAAH 553
                L      A 
Sbjct: 527 LARSALVAEAKLAA 540


>gi|72548349|ref|XP_843378.1| acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
 gi|323363895|emb|CBZ12901.1| putative acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
          Length = 412

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 142/354 (40%), Gaps = 26/354 (7%)

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDWA 175
              +PVV K+A       +   A LE         +++    +    A+  T  V     
Sbjct: 55  GKMDPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLV 114

Query: 176 PKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
             IF   + +       P           LTE   G+D  A+ ++ +K            
Sbjct: 115 NNIFFNFANDAQRRKYLPKLAKDTVGCFCLTEAGSGSDAFALNTKAEKKGSKWVINGSKL 174

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEF 291
           +  +   +  F+++A V+   G   +   + D S  +G+   R +NK+G R+++T EL F
Sbjct: 175 YITNGGWAGIFLVMATVDPSKGYKGITCFVVDSSETSGVSVVRTENKLGIRASSTAELRF 234

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345
            N     + + NV     +  KI I  L+   + +    + +A+      + Y  +R   
Sbjct: 235 ENV---EVSEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQF 291

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G ++ D   M+   A+ A+++ AA  + +  +      +   ++AA A+  A +      
Sbjct: 292 GKLIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMAKYFASVV----- 346

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             A    + A+E  GG G++++  + R YR++   +I  G+    +  +  +++
Sbjct: 347 --AEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGTSIIQLQTIAKMIK 398


>gi|86135909|ref|ZP_01054488.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826783|gb|EAQ46979.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 580

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 88/475 (18%), Positives = 183/475 (38%), Gaps = 58/475 (12%)

Query: 66  LSCTAQELARMANYNTPQLHAY-GPGG-ERWD-KVEFHPAWHALLRRSIHDGLHCSIWDR 122
            +   +EL R  +     L+A     G    D KV     +     + +  G        
Sbjct: 28  AAAVLEELGRFCSEEIAPLNASGDAAGSHVVDGKVVLADGFAEAYAKFVEMGWQSLPHPG 87

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            F      +A  + AA   ++        + P +T  ++ AL+T  +      +   + S
Sbjct: 88  DFGGQDLPRA--VGAAATEVLNAANLSFALCPLLTDGAIEALLTAGSKETKAIYLENLVS 145

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE + G+D+A + S+ +  ++G Y +SG K F++    
Sbjct: 146 GKWTGT-------------MNLTEPQAGSDLALVRSRAEAQANGTYKISGTKIFITYGEH 192

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+          +  FLVP+ + +     G+ N +    +++K+G +++
Sbjct: 193 DMSENTVHLVLARTPDAPAGVKGISLFLVPKYMVNADGSLGARNSVICPSVEHKLGIKAS 252

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  L+F    GFL+G+ N     + +M         +  ++    +  +A+ +A+ R  
Sbjct: 253 PTAVLQFEEATGFLIGEENAGLTYMFEMMNSARYAVGLQGIAVGERAYQQALAFAKERVQ 312

Query: 345 SGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEE 389
           S            ++  P ++R +  + +    A  ++   A   D A+      +++E 
Sbjct: 313 SAPVDGSTREAVTIVHHPDVRRMLMRMRVLTEGARGMAMFAAGCQDMARNAPTPDAQTEA 372

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A +  + P+ K +  +    V +  ++  GG G+IEE   A+HYR++    I  G+   
Sbjct: 373 KALSEFLTPLVKGFSTENGVEVASLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAI 432

Query: 450 MV--LDVLNLLEKGTNLFEQLFSTLEQ-----DLGSSGKKVITILRDSISLCKED 497
               L     L  G      L + + +       GS   + +     +     E+
Sbjct: 433 QANDLVGRKTLRDGGATARALAARIAETETELAAGSPAAQAVAPRLTAARRAFEE 487


>gi|317404526|gb|EFV84934.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 382

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 115/308 (37%), Gaps = 28/308 (9%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T      + P++ S E             +     LTE   G+D  A+    +
Sbjct: 95  QAIVLAGTDEQRARYLPRLASGE-------------LIGSFALTEPDAGSDAMALRLSAE 141

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +  D        ++  ++P++  F ++A+         +   L +    GL   +   K+
Sbjct: 142 RDGDHYVLNGTKRYITNAPIAGLFSVMARTAPERRANSISCFLVEAGTPGLIIGKPDKKM 201

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA----- 333
           G     T ++ F N        L          +  +  LD   + +S + V +A     
Sbjct: 202 GQAGALTSDVVFDNCRVPASALL--GGEEGNGFRTSMRVLDKGRLHISALCVGIADRLLR 259

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A+ YA  R   G  + +  +++  IAD   ++ AA  +    A   D  ++ + +AA  
Sbjct: 260 DAVKYATERKQFGQPIAEFQLIQAMIADSQAELYAARCMVLDAARLRDRGENTTMQAA-- 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  +M   V   A++  GG+GY+ E ++ R YR+     I  G+     L 
Sbjct: 318 -----CCKLYATEMVGRVADRAVQIHGGAGYMSEYAVERFYRDVRLFRIFEGTSQIQQLV 372

Query: 454 VLNLLEKG 461
           +   + K 
Sbjct: 373 IAREVIKA 380


>gi|254232824|ref|ZP_04926151.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C]
 gi|124601883|gb|EAY60893.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C]
          Length = 420

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 63  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 121 GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 167

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 168 EPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 226

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 227 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 286

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 287 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 346

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 347 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 399

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 400 QTIYGGTTEIMKEIIGRGL 418


>gi|328713184|ref|XP_001949624.2| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 1 [Acyrthosiphon pisum]
 gi|328713186|ref|XP_003245012.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Acyrthosiphon pisum]
          Length = 633

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 78/413 (18%), Positives = 171/413 (41%), Gaps = 54/413 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ ++E+                  LTE   G+D  +I ++    
Sbjct: 169 ILLFGTPEQKAKYLPRVSNKEF--------------AAFCLTEPSSGSDAGSIRTRAVLS 214

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
            DG  + L+G+K ++S+  M++   + AQ    + + G  +  V   + + +  G+    
Sbjct: 215 PDGKHFVLNGNKIWISNGGMAEIMTVFAQTPVKDEKTGKTVDKVTAFIVERAFGGVSNSP 274

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ + +    +    NV  G  +  K+ +  L++    ++      M
Sbjct: 275 PEKKMGIKASNTAEVTYEDVKIPI---ENVLGGVGQGFKVAMNILNNGRFGMAAALSGTM 331

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R   A+A+ +A  R   G  L     ++  +A +A+      ++++ ++ + D       
Sbjct: 332 RSVTAKAVEHATTRVQFGKRLDSFGSIQEKLARMAMLHYVTESMAYMISGNMDSGSIDYH 391

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY++   + +  R+     I  G+ 
Sbjct: 392 LEAA-------ISKCFASESAWYVCDEAIQILGGMGYMKATGLEKVMRDLRIFRIFEGTN 444

Query: 448 NAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC--KEDKGLARFL 504
           + + L V L  ++   +  ++L    +    + G  +  + + ++S         L+  +
Sbjct: 445 DILRLFVALTGIQFAGSHLKELQKAFKNPTANLGLILEEVTKRALSSVGFSSAPSLSHLV 504

Query: 505 TEKIA----LASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             K++    LA  +         + L + G   I + FL NR       T+ M
Sbjct: 505 HPKLSDAANLAGQSVGLFGPAVESLLIKHGKGIIDEQFLLNRLAQAAIDTYTM 557



 Score = 38.8 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 6/76 (7%)

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +ID+  +   +A  A+D    T +  R   + +           A   A +T+ +C 
Sbjct: 534 GKGIIDEQFLLNRLAQAAIDTYTMTVVLSRATRALNLGLPT------ADYEALLTQVYCS 587

Query: 406 KMAPAVIAEAMECIGG 421
           + +  V +  ++   G
Sbjct: 588 EASDRVASNLLQLKSG 603


>gi|111018872|ref|YP_701844.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818402|gb|ABG93686.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/416 (20%), Positives = 145/416 (34%), Gaps = 42/416 (10%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
            + PS    E++ L E  +    +E+             +     R D+      W A  
Sbjct: 3   KHIPSWHDDEVKALSELAVGFFEREVVAHNEK-------WDAQ-HRIDRAV----WLA-- 48

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
             +   GL C      +       AH +        A   A  +   S   A  +    T
Sbjct: 49  --AGELGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYAGDLALGISVHSGIVAHYLLEYGT 106

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + W P + + E             +   +G+TE   G+D+ AI +   +  D  Y 
Sbjct: 107 EEQKRTWLPSMATGE-------------ILGAIGMTEPGAGSDLKAIKTTAIRDGDE-YV 152

Query: 228 LSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNA 285
           ++G K F+++  S   I+LA + + + G   V  L+ D     G    R+ +K+G     
Sbjct: 153 VNGSKTFITNGASADMIVLAVKTDPKAGAKGVALLIVDLRDCPGFAVGRVLDKVGQHGAD 212

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F++       LLG+     G +    +   L     +   M  ++ + + Y R R
Sbjct: 213 TSELSFTDVRVPVSNLLGEEGQGFGQLMAQLVQERLIIGAQASGAMTRAVEDTVAYTRSR 272

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L +       +A+          ++   A   D               A + KY
Sbjct: 273 QAFGHSLFEFQNTAFELAECQT-------IARTCAVFLDHCIEAHLRGELDPSEAAMVKY 325

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  +   AVI   ++  GG GY+ E  IAR Y ++    I  G+   M   +   L
Sbjct: 326 WLTEQQCAVIDRCVQLHGGYGYMREYLIARMYEDARVQKIYAGANEVMKGIIAKSL 381


>gi|291485755|dbj|BAI86830.1| hypothetical protein BSNT_04865 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 594

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 170/482 (35%), Gaps = 62/482 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D +E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  +    +    K + P + S E                   LTE   G+D 
Sbjct: 113 GAHVGIGSLPIVFFGSEEQKKKYLPGLASGE-------------KIAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D F++ A+V+G          + +    G
Sbjct: 160 LGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDK----FSAFIVEKEFPG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L  +  G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQAEVPTENLLGEIGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    + +  I  +A  + A  +  +R    F++    
Sbjct: 276 ASKRVIELSASYANQRRQFKTPIAGFSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQ 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 FTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L+L EK  +L E+L   + ++ GS    
Sbjct: 396 RDSRINRIFEGTNEINRLIVPSTFLKKALKGELSLFEKAQSLQEELMMLMPEEPGS---- 451

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                     + +++K + +   +KIAL ++  A  + G     +  +     D   + +
Sbjct: 452 ---------GVLEQEKYIVKQ-AKKIALFAAGLAAQKYGKAIDREQEILVNVADIVSNVY 501

Query: 543 CM 544
            M
Sbjct: 502 AM 503


>gi|171185009|ref|YP_001793928.1| acyl-CoA dehydrogenase domain-containing protein [Thermoproteus
           neutrophilus V24Sta]
 gi|170934221|gb|ACB39482.1| acyl-CoA dehydrogenase domain protein [Thermoproteus neutrophilus
           V24Sta]
          Length = 405

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 134/379 (35%), Gaps = 28/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    LLR+    G         +             +     A    
Sbjct: 36  PRALEIDERDEAPL--DLLRKMGEQGFFGLEIPEQYGGQGGDYRMAAILSEEVSRASPGL 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               + +   ++ + L  T    + + P+I   E                    TE   G
Sbjct: 94  SVYFNSARLFSAPILLYGTEEQRRRYLPQIARGE-------------KLAAFASTEPCCG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           +D+A + ++ +++           +  SS ++   ++LA+     +       +   + +
Sbjct: 141 SDVAGVRTRARRVGGRWVINGRKAFISSSDVAHYILVLARTSDPPDAGRRHVGLSMFVVE 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+  ++  +K+G R N   E+  ++       L+G   +      +      +  A
Sbjct: 201 RDAPGVKVEQCYSKLGLRGNHACEISLTDVEVPEESLVGREGMGFYYAMEAFNRSRIGIA 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +  +A  YA RR   G  +     ++ ++ ++   I  A  L++  A   D
Sbjct: 261 AQAVGMAQAAFEKAFDYAHRREAFGVKIASFQAIQFSLVEMLAKIMTARLLTYMAAKLAD 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +           +A + KY+  + A  VI++A++  GG+G + E  + R YR+     
Sbjct: 321 EGRRE------FVFVASLAKYYATEAAEEVISDAVDVFGGAGVVRETGLERLYRDVKITQ 374

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+ N   L     L +
Sbjct: 375 IYEGANNVQKLAAYRQLVR 393


>gi|315607671|ref|ZP_07882665.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574]
 gi|315250607|gb|EFU30602.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574]
          Length = 577

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/432 (19%), Positives = 164/432 (37%), Gaps = 43/432 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R +  +          + +   A     ++ S        +  
Sbjct: 93  ENIDATRKAGLWGVSMPRRYGGLNLPNVTFSMLSEIIAAADGGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
             +    K + P+I + E               + + LTE   G+D+  +  +     ++
Sbjct: 152 FGSEEQCKKYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKATFDEAE 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G  
Sbjct: 198 NCWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRDGGVNVRHIENKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G+  +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGNTRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKE 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA 391
           R   G  +I  P +   ++ +   + A  +L ++ A   D          + K  +EE A
Sbjct: 318 RAQFGQKIIHFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDISRDRKLDAEERA 377

Query: 392 -------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +A+   GGSG+I E    R +R++   SI  
Sbjct: 378 EMKKYNRLADAFTPLAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLFRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
           G+    V+  +  +  GT L       E       Q L S   K++ +  ++++  KE  
Sbjct: 438 GTTQLQVVAAIRYITNGTYLSIIKEMLEAPVCDSLQPLRSRVAKLVALYEEAVNHVKEAD 497

Query: 497 DKGLARFLTEKI 508
           ++ L  FL  ++
Sbjct: 498 NQELHDFLGRRL 509


>gi|288924664|ref|ZP_06418601.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17]
 gi|288338451|gb|EFC76800.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17]
          Length = 577

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/432 (19%), Positives = 165/432 (38%), Gaps = 43/432 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R +  +          + +   A     ++ S        +  
Sbjct: 93  ENIDATRKAGLWGVSMPRRYGGLNLPNVTFSMLSEIIAAADGGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
             +    K + P+I + E               + + LTE   G+D+  +  +     ++
Sbjct: 152 FGSEEQCKKYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKATFDEAE 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G  
Sbjct: 198 NCWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRDGGVNVRHIENKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G+  +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGNTRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKE 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRS 387
           R   G  +I  P +   ++ +   + A  +L ++ A   D              +A+ R+
Sbjct: 318 RAQFGQKIIHFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDISRDRKLDAEERT 377

Query: 388 EEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           E   Y   A    P+ K    + A     +A+   GGSG+I E    R +R++   SI  
Sbjct: 378 EMKKYNRLADAFTPLAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLFRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496
           G+    V+  +  +  GT L       E       Q L S   K++ +  ++++  KE  
Sbjct: 438 GTTQLQVVAAIRYITNGTYLSIIKEMLEASVCDSLQPLRSRVAKLVALYEEAVNHVKEAD 497

Query: 497 DKGLARFLTEKI 508
           ++ L  FL  ++
Sbjct: 498 NQELHDFLGRRL 509


>gi|224056002|ref|XP_002197059.1| PREDICTED: acyl-Coenzyme A dehydrogenase, long chain [Taeniopygia
           guttata]
          Length = 431

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 125/373 (33%), Gaps = 34/373 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         L  ++   GL           +              +         
Sbjct: 76  FHAEWEKEGQVSRELWEKAGQQGLLGVAIAEKHGGIGADILSSAIVWEEQMYVNCTGPGF 135

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +A   +    K + P++ + +                 + +TE   G+D+
Sbjct: 136 SLHSDIVMPYIANYGSEEQIKHFIPQMVAGKC-------------IGAIAMTEPGAGSDL 182

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
             + +  +K     + L+G K F+++  MSD  I++A    E R     +   L +    
Sbjct: 183 QGVRTYAKKDGSD-WILNGSKVFITNGWMSDVVIVVAVTNREARSPAHGISLFLVENGTK 241

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   KIG ++  T EL F +       LLG  N     +        L  A M++
Sbjct: 242 GFIKGRKLQKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAELPQERLLIADMAL 301

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +       E  +Y R+R   G  +     ++  +A+I   I    A         D    
Sbjct: 302 ASCEFMFEETRNYVRQRKAFGKTIAHLQTVQHKLAEIKTQICVGRAF-------MDNCLQ 354

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +       A + KYWC  +  +V  + ++  GG GY+ E  IA+ + ++    I  G
Sbjct: 355 LHADKRLDSATASMAKYWCSDLQNSVATQCVQMHGGWGYMWEYPIAKAFVDARVQPIYGG 414

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   +
Sbjct: 415 TNEIMKELIARDI 427


>gi|111022099|ref|YP_705071.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821629|gb|ABG96913.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 388

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 152/392 (38%), Gaps = 32/392 (8%)

Query: 75  RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           R A  +  P L  +   G+  D+         L R++   GL     +  F         
Sbjct: 24  RFAERDVAPHLRDWAEAGQ-VDR--------DLYRQAGKLGLLGIDVEERFAGGG----- 69

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            I   R   +   E   + +P    A ++ L     +   +   + + E       P+  
Sbjct: 70  -IDDFRFNAIVIEELCRVGAP----AVVMGLAGINDLVTPYLVSLANEEQKHRFLTPLCT 124

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D+AAI++      D +  L+G K F+S+ M +D  I++A+ +  
Sbjct: 125 GEKIGAIAMTEPGAGSDLAAISTTALPDGDDL-VLNGTKIFISNGMLADFVIVVAKTDPA 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
            G   V  L+ +    G       +KIG  +  T EL F +       +LG+ N   G +
Sbjct: 184 AGKKGVSLLVVEDGMAGFTRNGPLHKIGLTAQDTAELVFDDVRVPRENVLGEPNDGFGYL 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L  A+ S++ MR +  +A+ Y+  R   G  + D    +  +A++A +I  A
Sbjct: 244 RHNLPQERLSVAVTSMASMRRTFDQALTYSCDRTAFGRRVADFQANRFYLAELATEIEIA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +       D     +       + A + K+W  ++   V+  A++  GG GY+ E  
Sbjct: 304 QCFT-------DRCILDAANGTLDEVTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYD 356

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A+ Y +     I  G+   M   +   L + 
Sbjct: 357 VAQDYLDCRGGPIYAGTTEIMKEIIGRKLTRA 388


>gi|294651523|ref|ZP_06728833.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822587|gb|EFF81480.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 387

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 138/377 (36%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQL 146
           P    WD+ E  P    L +++   GL    +   +  +          A + +      
Sbjct: 29  PFVNEWDEAETFP--RELYKKAAEIGLLGLGFGEEYGGIPDADPFYSLLAGVEMAKAGSG 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +      A  +    +  +     P I S E                 L +TE  
Sbjct: 87  GVHISLMVHTIGAPPIQHFGSEELKAKVLPDIISGE-------------KISALAITEPG 133

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLED 264
           GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL D
Sbjct: 134 GGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLID 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+    LK K+G  ++ T  L F         LLG  N     + +   +      
Sbjct: 193 AHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENSGFKVIMNNFNMERFFLG 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +++     V   EA+ +A++R   G  L+D  V++  + D+A  +    AL    A    
Sbjct: 252 VVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLEETAWKMT 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +    + A       + K    +        A++ +GG G++      R YRE   N 
Sbjct: 312 QPQL---QGADLVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNM 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 369 IGGGAEEIMKDLISKQL 385


>gi|149183811|ref|ZP_01862210.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1]
 gi|148848478|gb|EDL62729.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1]
          Length = 594

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 79/469 (16%), Positives = 163/469 (34%), Gaps = 60/469 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+ +   GL  +     +  +   +      +     A   +    +     +  + L
Sbjct: 66  KLLKEAGELGLLGADVPEEYGGLGLDKVSSALISEKMSTAGGFSITHGAHVGIGSLPIVL 125

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + P + + E                   LTE   G+D     +  +    G
Sbjct: 126 FGDEDQKQKYLPALATGE-------------KIAAYALTEPGSGSDALGARTTAKLNEAG 172

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  ++  +D F++ A+++G          + +    G+     + K+G +
Sbjct: 173 THYVLNGEKQWITNAGFADVFVVYAKIDGEQ----FSAFIVEREYPGVSTGAEEKKMGIK 228

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           S++T  L   +    +   L     G +    IL        + +V G + ++   I YA
Sbjct: 229 SSSTRTLILEDAQVPVENLLGEAGKGHIIAFNILNIGRYKLGVGAVGGSKRAMDVTIKYA 288

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
            +R      +    + K   A +A  + A  +  +R    F++                +
Sbjct: 289 NQRQQFKTPISSFNLTKEKFATMAAKLYATESSVYRTVGLFEDRMSKLTEEEVKNGTEVA 348

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A   I   + K +  +    ++ E ++  GG G+++E  I R YR+S  N I  G+ 
Sbjct: 349 KSIAEYAIECSLNKVFATETLDYIVDEGVQIHGGYGFMQEYEIERMYRDSRINRIFEGTN 408

Query: 448 NAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
               L V            L L +K   L E+L   + +++G +               +
Sbjct: 409 EINRLLVPGTFVRKALKGELPLFQKAQALQEELMMLMPEEVGDAP-------------LE 455

Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           ++K L +   +KI L  +  A  + G     +  +     D   + + M
Sbjct: 456 QEKYLVKN-AKKIGLLIAGLAAQKYGKALEKEQEILVNIADIISNAYAM 503


>gi|308489191|ref|XP_003106789.1| CRE-ACDH-10 protein [Caenorhabditis remanei]
 gi|308253443|gb|EFO97395.1| CRE-ACDH-10 protein [Caenorhabditis remanei]
          Length = 417

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 122/379 (32%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P    ++R++   GL        +                        
Sbjct: 52  PNAAKFDESGEFP--WEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGL 109

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V +       K +                +    +     +TE   G
Sbjct: 110 QLGIMGPSLAIAPVYIAGNEEQKKKYL-------------GALAAEPIIASYCVTEPGAG 156

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++ +K  +         W      +  F +LA+ +              + DG
Sbjct: 157 SDVNGVKTKCEKKGNEYIINGSKAWITGGGHAKWFFVLARSDSDPKTPAGKAFTAFIVDG 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------LIYLD 319
              G+   + +  +G R + T  + F +         NV   P    K+      +    
Sbjct: 217 DTPGISRGKKEKNMGQRCSDTRTITFEDVRVPA---ENVLGAPGAGFKVAMGAFDMTRPG 273

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++      L E+  YA +R   G  + +   ++  +AD+A+++  A  ++++ A  
Sbjct: 274 VAAGALGLSWRCLDESAKYALQRKAFGTEIANHQAVQFMLADMAVNLELARLITYKSATD 333

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S         A I K +    A      A++  GG+G+  E  + +  R++  
Sbjct: 334 VDNKVRSS-------YNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKI 386

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  +L
Sbjct: 387 YQIYEGTSQIQRIVISRML 405


>gi|331224454|ref|XP_003324899.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303889|gb|EFP80480.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 433

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 149/365 (40%), Gaps = 28/365 (7%)

Query: 91  GERWDKVEFHPAWHALLRR----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            +R+ +    P    +  +          ++   +   ++D  F  +   Q H    A  
Sbjct: 72  AQRFAEEVVAPKVREMDEKETTDLGLAVVAVDPEIIKGLFDNGFMGIETSQEHGGSGASF 131

Query: 141 -YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
              +  +E    + PSV+    V         +++A K    +Y      P   TS    
Sbjct: 132 TSAILVIEELAKVDPSVSLICDVHNTIANTTIRNYASKALLDKYM-----PDLSTSKVAC 186

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258
             L+E   G+D  A+ ++  K S+G Y ++G K ++++   ++ F++ A ++   G   +
Sbjct: 187 FCLSEPGSGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFANLDPSKGYKGI 246

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              L + S  G+   + + K+G ++++T  L F N       L+G   +      ++   
Sbjct: 247 SCFLLEKSM-GVEIAKKEEKLGIKASSTCTLNFDNVKVPKENLIGQEGLGYKYAIEILNE 305

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A   V   + +  +A+ Y  +R   G  + +   M+   AD+  +I AA  L++ 
Sbjct: 306 GRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQFADVHTEIEAARMLTYN 365

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +E K  +E       MA + K +  ++A      A+E  GG G+  E  I +++R
Sbjct: 366 AARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEWCGGVGFTRETGIEKYWR 418

Query: 436 ESPAN 440
           +S   
Sbjct: 419 DSKIT 423


>gi|115522103|ref|YP_779014.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516050|gb|ABJ04034.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 381

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 138/413 (33%), Gaps = 43/413 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + +EL+   +      A++LA  A     Q                  AW  L     
Sbjct: 6   PWMTEELDTFRDQFRKFLAKDLAPHAEKWRAQ-KMVDR-----------SAWLKL----G 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G         +  +    A+       +  +       +   S   A  +    +   
Sbjct: 50  EMGALLPSIPEEYGGLGASFAYDAAIYEEMEAIVPDALSGVTVSSGIVAHYIKNYGSEEQ 109

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W P +   E             +   + +TE   G+D+ A+ +  +   +  Y ++G
Sbjct: 110 KLRWLPGMARGE-------------LIGAIAMTEPGTGSDLQAVRTTAKLQGNA-YVING 155

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++  +   +++    G  G   +  ++ +     G    R  +KIG  ++ T EL
Sbjct: 156 QKTFITNGQNADLVIVVARTGGAGAKGLSLIVVETKDNPGFKRGRNLDKIGLHASDTSEL 215

Query: 290 EFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F +        L      G  + M+ L    L  AI +V+ M  ++     Y R R   
Sbjct: 216 FFEDAVAPPENLLGAEEGKGFAQLMQQLPQERLIIAIGAVAAMERAVQLTADYTRERKAF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +I+       +A+   +   A           D    +        + A + K+W  
Sbjct: 276 GQPIIEFQNTAFTLAERKTEAFIARVFV-------DFCLVQLLAGNLDAVTASMAKWWTT 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +     + E ++  GG GY++E  I+R Y ++    I  G+   M L +   L
Sbjct: 329 QKQVETVDECLQLHGGYGYMQEYPISRMYVDARIQKIYGGTNEVMKLLIARSL 381


>gi|72161685|ref|YP_289342.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915417|gb|AAZ55319.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 387

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 144/393 (36%), Gaps = 28/393 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +ELA            YGP  E+ D VE  P       R    G         +    
Sbjct: 11  EIRELASKVAR-----EVYGPIAEQLD-VERKPISREERIRLGELGFLGIAHQERYGGAG 64

Query: 129 RKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
              A  +     +  + +  A  +   +   A ++  + T    + W P I S E     
Sbjct: 65  APLAQALAVIEEFARVCRPAAFQIFEANTGPAQVINYLGTEEQRERWLPDIISGE----- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                     + + ++E   G+    + +  +   DG       +W  +   +D +++ A
Sbjct: 120 --------KTMAVAISEPDAGSAATDMRTTARPSGDGYVITGTKRWISNGGEADLYLVYA 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++    G   +  L+ +    GL +   +  +G R   + ++     +      +  + G
Sbjct: 172 RLTDEPGSKGIGALVVEKGTPGLSFGPPERLMGFRGIPSADVILDEVWVPKENLVVPAGG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +   +     L +  MS+   + +L   I Y + R   G  LI+   ++  +AD+ + 
Sbjct: 232 FGKLFGVFSIERLGNTTMSLGIGQEALDRTIAYVQEREQFGKPLIEFQSVQITLADMVMQ 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + +A  L  R A S +  K          +   + K    +MA  V   AM+  GG+GY 
Sbjct: 292 VDSARLLQQRAAASAEGGKLPD------PLQVSLAKCAANEMAKRVTDMAMQLHGGNGYT 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EE  I R +R++   +I  G+ N   + +++ L
Sbjct: 346 EEYGIERLHRDAHGWAIAGGTPNMQRIRIVSEL 378


>gi|301613268|ref|XP_002936129.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 423

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 119/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL       +   +                        +  +      V + 
Sbjct: 79  LIKRAWELGLMNGHIPENCGGLALGIFDTCLITEEIAYGCTGVQTAIEANSLGQMPVIIA 138

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K +  +             M +  +     +TE   G+D+A + ++ +K  +  
Sbjct: 139 GNEAQKKKYLGR-------------MMEEPLMCAYCVTEPGAGSDVAGLKTRAEKKGNEY 185

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+                + +    G+   R +  +G R
Sbjct: 186 IINGQKMWITNGGKANWYFLLARTNPDPKVPASKAFTGFIVEADSPGIQIGRKEMNMGQR 245

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 246 CSDTRGIVFEDVRVPA---ENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEAT 302

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G ++ +   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 303 KYAVERKTFGKLIAEHQAVSFMLAEMAMKVELARLAYQRAAWEVDAGRRNT-------YY 355

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  V ++A++  GG+G+  +  + +  R++    I  G+     L V  
Sbjct: 356 ASIAKAYAGDIANQVASDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVAR 415


>gi|163734480|ref|ZP_02141920.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392488|gb|EDQ16817.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 369

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 133/380 (35%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  PA   +  +    GL       +                         
Sbjct: 12  PVAEELDRDERFPA--EIYAQMAQLGLFGICVPEAMGGPGMDTLAYAIVMEELSRGYASV 69

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                      +++    T      W P I                   +   +TE   G
Sbjct: 70  ADQCGLVELITTLLVAHGTQAQRDMWLPDIL-------------AAKTKVAYCITEPEAG 116

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD++ I +   +   G     G  W  ++P++D   +LA+ +   G   +     D   +
Sbjct: 117 TDVSGIRTTAVRDGVGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFAVDLHAD 176

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSV 325
           G+     ++K+G R++    L F +        L         M  ++    +  A ++V
Sbjct: 177 GVARGPKEHKMGQRASPVGPLHFDDVKLPAHALLGAEGRGFHMMMSVLDKGRVGIAALAV 236

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA +R      + +   ++  +ADIA D+ AA  L+   A+  D    
Sbjct: 237 GIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDIG-- 294

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A     + K +   MA A  A+A++  GGSGYI+   + R YR++    I  G
Sbjct: 295 -----ADATKACSMAKCFAGDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQIYEG 349

Query: 446 SGNAMVLDVLN-LLEKGTNL 464
           +     + +   LL KG + 
Sbjct: 350 TNQIQRMIIARELLAKGADA 369


>gi|110351008|gb|ABG73396.1| acyl-Coa dehydrogenase [Pimephales promelas]
          Length = 243

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 10/250 (4%)

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D  ++ ++ +K SD         W  ++  +  F+++A  E   G   +   L D
Sbjct: 1   SESGSDAFSLKTKAEKHSDYYIINGSKMWISNAEHAGVFLVMANAEPAAGYRGITCFLVD 60

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +GL   R +NK+G R+++T  L F N       +LG +         M     +  A
Sbjct: 61  RDTDGLSIGRKENKLGXRASSTCPLTFDNMKIHQKNILGKVGHGYKYAIGMLNEGRIGIA 120

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +     A+ Y R+R   G  + D   ++  IA +A  + AA  L++  A   +
Sbjct: 121 AQMLGLAQGCFDHAVPYTRQRVQFGKRVFDFQGLQHQIAHVATQLEAARLLTYNAARLKE 180

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   +EA  A       KY+  ++A    ++ +E +GG G+ ++  I ++YR+    S
Sbjct: 181 AGRPFIKEACMA-------KYFSAEVAALTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGS 233

Query: 442 ILLGSGNAMV 451
           I  G+ N  +
Sbjct: 234 IYEGTTNIQL 243


>gi|194366382|ref|YP_002028992.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349186|gb|ACF52309.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 382

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 149/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  LQDVARRIAQEKIAPSAEHHDRTGE-------FPL--DNIRLLGENGLMGIEVPAEYGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                  + A             +MS  +    + +         + +   I   E    
Sbjct: 63  GMDPIAYVLAMVEVAAGDAAHSTIMSVNNSLFCNGILTHGNEAQKQKYVRAIAEGE---- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D  A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 119 ---------AIGAFALTEPQSGSDATAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   ++    +V 
Sbjct: 170 FAMSEPDKGARGITAFMIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAQAEDVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  KI +  LD+  + ++   + +A A +     Y + R   G  +    + +  I
Sbjct: 227 GQEGEGFKIAMGVLDAGRIGIASQAIGIARAAYEATIEYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + K  S EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWVKGQGKRFSNEAAIAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|188592155|ref|YP_001796753.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938529|emb|CAP63516.1| PUTATIVE ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 392

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 70/399 (17%), Positives = 142/399 (35%), Gaps = 28/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           ++  +A++ A +A      L    P   + D+ +  P    ++ +    GL       ++
Sbjct: 1   MIRDSARQQALLAELRRFVLETCIPLEAQIDQTDVIPE--PVVEQMRRLGLFGHSIPEAY 58

Query: 125 EPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                      +    +   A +        +  +A  +    T    + + P++ S   
Sbjct: 59  GGAGLTTEELAQVNIEVSQAATVFRARFGGNTGIAAESLVADGTEAQRQRYLPQLASG-- 116

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       V     LTE   G+D  A+ +  ++  D         +  ++P++D F
Sbjct: 117 -----------KVTGCFALTEPEAGSDATALQTTARQDGDHYVLNGSKCFITNAPIADLF 165

Query: 244 IMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----L 298
            + A+ + G  G   +   L +    GL     + K+G   +   ++   +        +
Sbjct: 166 TVFARTDPGTPGAHGISAFLVERGTPGLSTSEPERKMGQHGSPVGDVYLKDCRVPASAIV 225

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G  NV             ++ A + V      + E + YA +R   G  + D  ++++ 
Sbjct: 226 GGKPNVGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGQPIADYQLVQQM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD   ++ AA AL    A   D  +  + EA+         K +  +MA  V   A++ 
Sbjct: 286 IADSNTELHAARALVLETARKRDAGEDVTMEASM-------CKLFASEMAGRVADRAVQV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            GGSGY+      R YR+     +  G+     L++   
Sbjct: 339 FGGSGYMARTVAERFYRDVRLFRLYEGTTQIHQLNIARR 377


>gi|153004046|ref|YP_001378371.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152027619|gb|ABS25387.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 381

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 78/374 (20%), Positives = 141/374 (37%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD     P    L R     G         +        + +  A   +  +   
Sbjct: 28  PHARAWDAAATFP--RELFRTFGELGFFGIRHPPEWGGSGLDWWYVVAYAEELVRCRNAG 85

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++     +  ++A + T    +++              AP  +      L ++E  
Sbjct: 86  LAMAMLVHGEMAIPVIADLGTEEQKREFL-------------APAIRGEKVAALAISEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+AAI +  ++  D +       W  +   +D F+ +A   G  G   +  LL    
Sbjct: 133 AGSDVAAIRTTARRDGDALVVNGAKMWITNGARAD-FLTMAVRTGGEGHEGISLLLFPTD 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   K+GN S+ T  L F +      +LLG+ N     V        L +A+ 
Sbjct: 192 TPGFQVSRTLEKVGNPSSDTALLFFEDCRVPARWLLGEENQGFYHVMANFQGERLVAAVQ 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+GM++ + +A+ YA  R   G  L    V +  +A+    I AA  L++R  +     
Sbjct: 252 AVAGMQLMVEDAMRYAGERSAFGRPLARMQVWRHKLAEHLTAIEAARWLTYRACDLLQRG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +E         + K + C++A  V  + M+  GG GY+ E  +AR +R+    +I 
Sbjct: 312 EPAVKE-------ISMAKLFACELAQRVAYDCMQLHGGMGYVLETDVARAWRDVRVMTIA 364

Query: 444 LGSGNAMVLDVLNL 457
            G+   M   +   
Sbjct: 365 GGTSEIMKEIISRA 378


>gi|327441635|dbj|BAK18000.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 396

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 131/381 (34%), Gaps = 43/381 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +  GG       F P    + +R    GL        +        +   A    
Sbjct: 26  PYIAEWDAGG------GFDP---KIWKRLAELGLMGVCVPEKYGGAGMD--YNSLAIVCE 74

Query: 142 LMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  K     
Sbjct: 75  ELERGDTAFRTAVSVHTGLNSMTLMQWGTEEQKEKYL-------------VPQAKGEKIG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             GLTE   G+D+AA++S  ++  D         W     ++D F++ A  +       +
Sbjct: 122 AFGLTEPGAGSDVAAMSSFAKRNGDHYILNGQKTWISLCDIADHFLVFAYTDKEKAHHGI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317
              + +    G   + +K K G R+  T EL F +         N+     E  KI +  
Sbjct: 182 SAFIVEREWAGFSSKAIKGKYGIRAGNTGELFFEDVRVPA---ENLLGEEGEGFKIAMSA 238

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+   +V+   V L +A       Y + R   G  + +  ++ + +A +      +  L
Sbjct: 239 LDNGRFTVAAGAVGLIQACIEASVKYCKERETFGKPIGEHQLVGQMLAKMEAGYEMSRLL 298

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +R     ++    + E + A+  A       C  A     +A++  G  GY +E  +AR
Sbjct: 299 VYRAGELKNKGVRNTRETSLAKWQA-------CDFANKAADDAVQIHGAYGYSDEYPVAR 351

Query: 433 HYRESPANSILLGSGNAMVLD 453
           + R S A  I  G+     + 
Sbjct: 352 YLRNSKAPVIYEGTREIHTMM 372


>gi|116331245|ref|YP_800963.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116124934|gb|ABJ76205.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 585

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 79/495 (15%), Positives = 175/495 (35%), Gaps = 66/495 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-P 154
           KV F  +    + +    G+      R    +       ++   + + ++ +    ++  
Sbjct: 95  KVTFPNSMAKGINQVKDAGILPYSIGRKHGGLGIPA--TVQTMMMEVFSRADGSFAIALG 152

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +  A  +    +  + K++ PK+ + E             V   + LTE   G+D+  +
Sbjct: 153 CLNLAETIERFGSKEMVKEYVPKMANGE-------------VFGAMALTEPNYGSDLPNL 199

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
            ++  K  +G++ L+G K F++            + LA+      G   +   L   S  
Sbjct: 200 QTKAVKDENGVWRLTGTKRFITHGCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSS-- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSG 327
            +    ++ K+G   + T E+ + N+ G L+G+           M     L  A  ++  
Sbjct: 258 DVFIAGIEKKMGLHCSPTCEVVYENSPGILIGEEGYGLIRYSMAMMNGARLSIAAQAMGI 317

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +  EA  YA  R   G  + + P ++R ++ +  +IA   A+    + S D    +S
Sbjct: 318 ATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSIDLYHWKS 377

Query: 388 E--------------------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           E                        A +  P++KY+  + A  +  + ++  GG+G+  +
Sbjct: 378 ERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGGAGFTYD 437

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--------SS 479
             I+R YR+    +I  G+    ++  +  +  G +    L    E++          + 
Sbjct: 438 YDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKISVSSLLNE 497

Query: 480 GKKVITILRD---SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
            K+ +  + +   +I        +A  + +  A       L R            +R   
Sbjct: 498 NKETLEKIVESYSAIENSSTRDEVAFEVVQSTARVLIGFLLERGA----------SRLKG 547

Query: 537 NCHSTHCMLHGRFNA 551
                  +L   +N 
Sbjct: 548 EAKEKKGILAKEYNL 562


>gi|91978273|ref|YP_570932.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684729|gb|ABE41031.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 381

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 128/339 (37%), Gaps = 19/339 (5%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           P V +    + A+  Y  A  E    + P   S   V    +  +   +     S E   
Sbjct: 56  PSVPEAYGGLGASFAYDAAIYEDMESIVPDALSGVTV----SSGIVAHYILNYGSEEQRL 111

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFI 244
                M +  +   + +TE   G+D+ ++ +  +   D  Y ++G K F+++   +D  I
Sbjct: 112 RWLPAMARGELIGAIAMTEPGTGSDLQSVRTTAKLEGD-TYVINGQKTFITNGQNADLII 170

Query: 245 MLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++A+  G  G   +  + LE     G    R  +KIG  ++ T EL F N        L 
Sbjct: 171 VVART-GGPGAKGLSLIALETEDNPGFKRGRNLDKIGLHASDTSELFFENATAPKENVLG 229

Query: 304 V--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V+ M+ L    L  A+ +V+ M  ++     Y R R   G  +I+       +
Sbjct: 230 GEEGKGFVQLMQQLPQERLIIAVGAVAAMERAVKLTTDYTRERKAFGQPIIEFQNTAFTL 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+   +               D    R        + A + K+W  +     + + ++  
Sbjct: 290 AERKTEAFIGRVFV-------DFCIERLIAGDLDAVTASMAKWWTTQKQVETVDDCLQLH 342

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY++E  I R + +S    I  G+   M L +   L
Sbjct: 343 GGYGYMQEYPIGRMFVDSRIQKIYGGTNEVMKLLIARSL 381


>gi|325185221|emb|CCA19710.1| acylCoA dehydrogenase family member 9 putative [Albugo laibachii
           Nc14]
          Length = 612

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 153/461 (33%), Gaps = 49/461 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL     +  +  +        R    +  A + A  +M+        + L    +  
Sbjct: 97  ELGLFGLQIEEQWNGLELSNTGYARVCEEFSDASI-AVTIMAHQSIGLKGILLNGNEQQK 155

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLS 229
             + PK+ + E                   LTE   G+D A+I ++     DG       
Sbjct: 156 AKYLPKLATGEQ-------------LAAFALTEPSSGSDAASIKTRATLSEDGKHFILNG 202

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +   +D   + AQ +   G   V   + +    G+     ++K+G R + T E+
Sbjct: 203 SKIWISNGGWADVMTVFAQTQVD-GKDKVTAFIVERGFGGVTSGPPEDKLGIRGSNTCEV 261

Query: 290 EFSNTFGFLLGDLNVS--------TGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEA 335
            F N    +   L            G  +  K+ +  L++    +     +     +   
Sbjct: 262 YFENCKVPIENVLGGGPDMKTGGMVGVGQGFKVAMNILNNGRFGLGACAGASLRRIIGST 321

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +A  R   G  L    ++K+    + LD  A  +++F      D      E      I
Sbjct: 322 AQHANSRKQFGKPLASFGLIKKKFTMMTLDAFAIESMAFLTTGMIDRGDPSCE------I 375

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K +  + A   I E ++ +GG+G++++    R+ R+    SI  G+   + L + 
Sbjct: 376 EAAMCKVYGSEAAFNGINECIQIMGGTGFMKDWPFERYLRDCRILSIFEGTNEILRLLIA 435

Query: 456 --NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLC------KEDKGLARFLT 505
              +   G  L    Q       ++ S GK+    L+   S         E +  +  L 
Sbjct: 436 LSGIRTAGDRLSSIGQALKNPLANVSSFGKEFSDRLKRKFSPAPLPGVHPELQSASVVLQ 495

Query: 506 EKIALASS--AAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           ++ A         L + G   I +     R  D+      M
Sbjct: 496 QRTAEFGEIVELLLRKHGKKIIDEQLQLERIADSAMRLFAM 536


>gi|325277761|ref|ZP_08143322.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324097099|gb|EGB95384.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 589

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 94/533 (17%), Positives = 176/533 (33%), Gaps = 62/533 (11%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHP 101
           AL A  P++     E +         +E A++++     L       G R+D   V    
Sbjct: 23  ALWARLPALA----EHIDADTADAILEEAAKVSSQLVAPLSRQGDEQGVRFDAGSVTTPD 78

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +          G      + ++  +   +   +    +   A        + S  S   
Sbjct: 79  GFREAWNTYREGGWVGLGGNPAYGGMGMPKMLGVLFEEMLYAADCSFSLYSALSAGSCLA 138

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + P ++   +  T             + LTE   GTD+  I S+ +  
Sbjct: 139 IDAHASEALKATYLPPLYQGRWAGT-------------MCLTEPHAGTDLGLIRSRAEAQ 185

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----G 265
           +DG Y ++G K F++    D       ++LA++         +  FLVP+ L D     G
Sbjct: 186 ADGSYRITGSKIFITGGEQDLTENIIHLVLAKMPDAPAGAKGISLFLVPKFLVDANGRLG 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N      +++K+G +++AT  + F    G+L+G  N     +  M     L   I  +
Sbjct: 246 ERNAAHCGSIEHKMGIKASATCVMNFDAATGYLVGAPNKGLAAMFTMMNYERLSIGIQGI 305

Query: 326 SGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS 373
                S   A  YA  R  S               +I    ++R +  +        A +
Sbjct: 306 GCAEASYQAAARYANERLQSRAAVGPQLRDKAADPIIHHGDVRRMLLTMRTLTEGGRAFA 365

Query: 374 ------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                   +A   +    R +      ++ P+ K +             +  GG GYI E
Sbjct: 366 AYVGQQLDVARYAEAGSEREQAQRMVALLTPVAKAFFTDNGLESCVLGQQVYGGHGYIRE 425

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
               +  R+     I  G+     LD+L   +L  G        + + +           
Sbjct: 426 WGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFAAEV-RAFSLEAPLHRA 484

Query: 486 ILRDSISLCK-EDKGLARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFL 535
            L+ S++  +     L    TE   L S+ A   L   G+   A  ++  R  
Sbjct: 485 ALQASLTRLEATSAWLQARATEDANLVSAVAVEYLQLFGLT--AYAYMWARMA 535


>gi|167645856|ref|YP_001683519.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167348286|gb|ABZ71021.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 378

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 128/373 (34%), Gaps = 32/373 (8%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V  H  W        +L  R+   GL C      +        H              A 
Sbjct: 27  VPHHAQWERDGIVPKSLWLRAGEQGLLCVTAPEEYGGSGGDFGHSAILIEELARVNATAV 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + S  +   +    T      W P++ S               +   + ++E + G+
Sbjct: 87  GFTTHSDIAVPYLVNYGTDEQKARWLPRLISG-------------DLIAVIAMSEPQIGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+  + ++  +  D  Y LSG K F+++ ++    I+ A+VEG+     +     +    
Sbjct: 134 DLRGMKTKAVRDGDH-YILSGQKTFITNGINSGLAIVAAKVEGQANPKDITLFCVEAGTP 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSV 325
           G    +   KIG R   T EL FS+    +   L       G +        L   I +V
Sbjct: 193 GFDKGKKLEKIGLRGQDTSELFFSDVRVPVENRLGEESKGFGCLMTELAKERLIIGIRAV 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + +   L + I Y + R V G  L +    +  +A++                   + + 
Sbjct: 253 ASVESMLDKTIAYTKDRIVFGKPLFEFQNTRFKLAEVKARSQMLRVFIDDCLQKLFDGEL 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E AA A++          ++   ++ E ++  GG GY+ E  + R + ++    I  G
Sbjct: 313 TPETAAMAKLT-------SAELHGQLLDELLQLHGGYGYMSEYDVGRAWVDARVARIYAG 365

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   L
Sbjct: 366 TSEIMKEIIARTL 378


>gi|332235168|ref|XP_003266779.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 394

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 130/406 (32%), Gaps = 30/406 (7%)

Query: 59  ELLGEYVLSCTAQE-LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
            LLG  V+S   +  LA   +     L           + +    W  L       G+  
Sbjct: 6   RLLGWRVVSWRLRPPLAGFVSQRAHSLLPVDDAINGLSEEQRQEFWKQLGNL----GVLG 61

Query: 118 SIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                 +         H +    +   +        + S    + +         + + P
Sbjct: 62  ITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLP 121

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+   +Y            +       E    +D+ ++  + +K  +         W  +
Sbjct: 122 KVRKWKY------------LLSVACCHEPNVCSDVVSMKLKAEKKGNHYILNGNKFWITN 169

Query: 237 SPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            P +D  I+ A+ +         +   + +    G    +  +K+G R + T EL F + 
Sbjct: 170 GPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDC 229

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 +LG  N     +     L  L  A   +  M+  L   I Y   R   G  +  
Sbjct: 230 KVPAANILGHENKGVYVLMTGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGH 289

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +M+  +AD+   + A     + +A + DE    +++             +  + A  V
Sbjct: 290 FQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKD-------CAGVILYSAECATQV 342

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             + ++C GG+GYI +  + R  R++    I  G+     L +   
Sbjct: 343 ALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 388


>gi|326427491|gb|EGD73061.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 424

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 144/426 (33%), Gaps = 39/426 (9%)

Query: 41  SLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-RWDKVE 98
             L A+   F S     EL    +  L   +++ A   N   P    +   GE  WD   
Sbjct: 25  RPLGAVSKRFASSGLSFELSDE-QRALDDLSKKFA--VNEIAPAAAHHDKTGEFPWD--- 78

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
                  L++++   GL       ++  +          +             +     +
Sbjct: 79  -------LVKKAHELGLMNVHIPEAYGGLGLGGVDCCIVSENLAYGCSGISTAIGGPTLA 131

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            S + +  +  + K +  ++              +  +     +TE   G+D+A + +  
Sbjct: 132 ESPLIVGASEDIKKRYLGRMT-------------EEPLIASYCVTEPGCGSDVANVQTFA 178

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKN 277
           +K  D         W   +  ++ F +LA+ +            + D    G+   + + 
Sbjct: 179 EKRGDEWVINGNKAWITGAGHANWFFVLARTDRNAKPGSAFTGFVVDADTAGVILGKKEP 238

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            +G R++ T  + F +        +  V  G    MK       + A  +V   + +L E
Sbjct: 239 NMGQRASDTRTVTFEDAVVPDANRVGDVGFGFKLAMKAFDITRPEVAAGAVGVAQRALDE 298

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ Y+  R   G  +I    +   +AD+ + + A+  L+ R A   D  +  +       
Sbjct: 299 ALKYSLERKTFGVPIIGHQAVSFMLADMKMGVDASRWLTLRSAWELDAGRRPT------- 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K +    A     +A++  GG+GY  +  + +  R+     I  G+       +
Sbjct: 352 FFASMAKAFAADHAMKCTTDAVQIFGGNGYSSDYPVEKLMRDCKIFQIYEGTSQIQRHII 411

Query: 455 LNLLEK 460
              + +
Sbjct: 412 AQTMAE 417


>gi|148224176|ref|NP_001086834.1| long-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|50418371|gb|AAH77524.1| Acadl-prov protein [Xenopus laevis]
          Length = 444

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 125/377 (33%), Gaps = 34/377 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         L  ++   GL  +        +              +       
Sbjct: 87  VPYHAEWEKAGQVSRNLWEKAGEQGLLGTSTPEEHGGIGADILSSAIVWEEQMYVNCTGP 146

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      ++   +    + + P++ + +                 + +TE   G+
Sbjct: 147 GFSLHSDIVMPYISRYGSKGQVEKYIPQMTAGKC-------------IGAIAMTEPGAGS 193

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++  MSD  I++A    E R     +   L D  
Sbjct: 194 DLQGVRTNAKKDGSD-WILNGSKVFITNGWMSDVVIVVAVTNREARTPAHGISLFLVDNG 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG ++  T EL F +       LLG  N     +        L  A M
Sbjct: 253 TKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQENKGFYYLMAELPQERLLIADM 312

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++       E  +Y ++R   G  +     ++  +A++   I              D  
Sbjct: 313 ALASCEFMFEETRNYVKQRKAFGKTIAHLQTVQHKLAELKTQICVGRTF-------LDNC 365

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E       A + KYW   +   V  + ++  GG GY+ E  IA+ Y +S    I 
Sbjct: 366 LQLHAEKRLDSATASMAKYWASDLQNTVATQCLQLHGGWGYMWEYPIAKAYVDSRVQPIY 425

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   M   +   + K
Sbjct: 426 GGTNEIMKELIARDIVK 442


>gi|332558578|ref|ZP_08412900.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332276290|gb|EGJ21605.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 379

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 138/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q +  MA     +     P    W+ V   P    L  +    GL       
Sbjct: 2   DFALSEEQQAIFDMARAFGAE--EIAPHARAWEGVGTIP--RTLWPKVAELGLGGVYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S     A M+    +  +   W P I    
Sbjct: 58  EHGGSGLGRLDATLVFEALAMACPSVAAFLSIHNMCAGMIDRYGSEELKARWLPGIC--- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                       +  +   LTE   G+D AA+ ++     +G Y LSG K F+S    SD
Sbjct: 115 ----------ALTTLVSYCLTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           A++ + +  G  G   +  LL      GL +  L++K+G R+  T +++F         L
Sbjct: 164 AYLTMCRT-GGAGPKGISTLLVPAETPGLSFGGLEDKMGWRAQETRQVQFDECLVPTDLL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  ++ G + +      Y   R   G  L     ++  
Sbjct: 223 VGEEGRGFAYAMAGLDGGRLNIAATALGGAQAAFDATRAYMAERKAFGQRLDGFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ + +  A     + A   D+          A     + K      A  V  + ++ 
Sbjct: 283 LAEMEVKLQQARIFLRQAAWKLDQGAPD------ATKFCAMAKLAVTDSAFGVANQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + V   L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|89890183|ref|ZP_01201694.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89518456|gb|EAS21112.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 389

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 144/386 (37%), Gaps = 38/386 (9%)

Query: 86  AYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                 E  + D+  F         +    G     +   +  +     + +        
Sbjct: 28  HIDRWEETGKIDREIF--------EKMGEMGYFALYYPEEYGGLNLDFFYTVIFLEEMQR 79

Query: 144 AQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A  +   +   A  +      R+ +++               P         LG
Sbjct: 80  INSGGFAAAMWVQAFLGAQHLLKEGDERIKQEYL-------------VPTLTGEKIGCLG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+A + +   K  D  Y ++G K F+++ + SD  ++ A+ +       +  
Sbjct: 127 ITEPFGGSDVAGMRTTAVKDGDH-YVINGSKTFITNGVYSDYLVIAAKTDPDAKGRGISI 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
            + D    G+   +L NK+G R++ T E+ F N       L+G+       +     L  
Sbjct: 186 FVMDRDTPGISATKL-NKLGWRASDTGEIGFDNVRIPAENLMGEEGKGFPYIMQHFALER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L   I + +    +L     Y R R   G  +     ++  +AD+  ++  A   ++ ++
Sbjct: 245 LIMGINAHARAEYALGYTAQYMRERTAFGTTIDKFQALRHGMADMYSEVEMAKNFNYSIS 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+     +EA+        +K    K+A  VI + ++ +GG GYIEE  +AR +R+S
Sbjct: 305 EQLDQGLYPVKEASM-------SKLVSTKIADEVIYKCLQYLGGYGYIEEYPLARMWRDS 357

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
               I  G+   M   +  ++  G +
Sbjct: 358 RLGPIGGGTSEIMREIIAKMVMDGKD 383


>gi|325918170|ref|ZP_08180321.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325918365|ref|ZP_08180498.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535420|gb|EGD07283.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535615|gb|EGD07460.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 372

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 145/396 (36%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     ++    +GL        +   
Sbjct: 2   IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIQLLGENGLMGIEVPSEYGGA 52

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                    A             +MS  +    + +    T    + +   I    +   
Sbjct: 53  GMDPISYALAMIEIAAGDGAHSTIMSVNNSLFCTGILKNGTEAQKQLYVRAIAEGTH--- 109

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 110 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 159

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 160 FAVTEPDKGSRGITAFMVDTDKPGFHRGKTEPKLGIRASATCEIEFADYIAHADDVLGVE 219

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 220 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 277

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + K    EAA A++ A        + A  +  +A++  G
Sbjct: 278 DMKCKLDAALLLTLRAAWLKGQGKKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 330

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 331 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 366


>gi|292655353|ref|YP_003535250.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291371232|gb|ADE03459.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 380

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 145/378 (38%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  +     PA   +  +     +     D ++  +   Q  + +    L  ++   
Sbjct: 26  PIAQDIEDEHRFPA--EIFDQLAELDVMGVPIDEAYGGLGGDQLMYALVVEELGRVSGGI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +    ++  + L  T    + W   + + E+               G  LTE   
Sbjct: 84  GLSYAAHVSLASKPIELFGTDEQKERWLTPLATGEH-------------LGGWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLED-G 265
           G+D + + +  ++  DG Y + G K F+++  ++ + ++ A  +   G   +   + D  
Sbjct: 131 GSDASDMDTVAERDGDG-YVIDGTKQFITNANVAGSVLVKAVTDPGAGYDGISTFIVDPE 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           + +G       +K+G  S+ T EL F + +      L    G  +  + +  LD   +S+
Sbjct: 190 NDDGFEVTTEWDKMGLNSSPTCELSFDDCWVPEDRLLGEEGGGWK--QTMKTLDGGRISI 247

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + + V LAE  +     YA+ R      +     ++  +  +      A  L+ + A  +
Sbjct: 248 AALSVGLAEGAYGHAKSYAQEREQFDRPISKFDAIRDKLVSMHRKTERARLLTHKAATRY 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K  S E+A A++ A        + A  V  +A++ +GG GY  + +  R YR++   
Sbjct: 308 DAGKRVSRESALAKLDA-------SEAAREVAEDAVQVLGGYGYTTDFAPQRFYRDAKLM 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     L +   L
Sbjct: 361 EIGEGTSEIQHLIIGREL 378


>gi|85710583|ref|ZP_01041647.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687761|gb|EAQ27766.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 380

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 130/384 (33%), Gaps = 33/384 (8%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            +  P L  +   G     +    AW AL       G+ C         +          
Sbjct: 27  EHMEPYLDDHEADG-----LVPRKAWKAL----GEAGMLCPTVKEENGGLGLDFGFNCVL 77

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A         AG  +   +T      L  +      + P + S               + 
Sbjct: 78  AEELAYMGSSAGFTLQNDITVNYFERL-GSEEQKAKYLPGMISG-------------DII 123

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
             + +TE   G+D+  I +   +  + +       +  +   +D  I++A+     G   
Sbjct: 124 SAIAMTEPGTGSDLQGIKTTAIEDGNHLVVNGSKTYITNGQNADVVIVVAKTNPAEGAKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
              +L D    G    R  +KIG  S  T EL F++       +LG        + +   
Sbjct: 184 TSLVLVDAGTPGFEKGRNLDKIGQHSADTSELFFADVRVPKTNILGGEGRGFIHLMEELP 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ + +G + +  EA+++ + R   G  + +    K  +AD+   +    A   
Sbjct: 244 QERLSIAVSAQAGAQRAFDEAVNFTKDRKAFGTTVFEFQNTKFTLADLKAKLQVGWA--- 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D A +R          A   K W  +M   ++   ++  GG+GY+ E +IAR +
Sbjct: 301 ----HLDWAIARHLRGELTTDEASAAKLWHTEMQWEMVDACLQLHGGAGYMNEYAIARLW 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++    I  G+   M   V   +
Sbjct: 357 RDARVARIYGGTSEIMKEVVSRAI 380


>gi|295835338|ref|ZP_06822271.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197696410|gb|EDY43343.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 387

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +   I          
Sbjct: 29  HLAPYALEWDREKHFPV--DVLRKAAGLGLGGVYVREESGGSGLTRTDGILVFEALATGC 86

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S       M+             P + S                     LTE 
Sbjct: 87  PCVAAYLSIHNMVGWMIDTYGDEAQRARHLPGLCSM-------------DDLASYCLTEP 133

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +  D  + L+G K F+S   +   ++++A+  G  G   +   L D
Sbjct: 134 GAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMART-GGAGPDGITAFLVD 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL +   ++K+G  +  T ++           +LG          +      L  A
Sbjct: 192 KDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRMLGAEGQGFRIAMNGLNGGRLGIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  + A++ D
Sbjct: 252 ACSLGGARSALDRSLQHLAEREAFGHPLIESEALRFRLADMATELAAARALLHQAADALD 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                    A A  +  + K +       +   A++  GG GY+ E  I +  R+   + 
Sbjct: 312 RKD------AQAPQLIAMAKRFATDTGFRIADRALQLHGGYGYLHEYGIEKIVRDLRVHQ 365

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL GS   M + V   L
Sbjct: 366 ILEGSNEIMRVIVARGL 382


>gi|297623950|ref|YP_003705384.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297165130|gb|ADI14841.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 397

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 134/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    P   AL+++    G+       ++       A                
Sbjct: 37  PGARERDETGVFPM--ALVKQLGELGVMGMQVPEAYGGAELDTATMALIIEEIAAVDGSL 94

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + S +      + L       + + P + + E                  GLTE   
Sbjct: 95  CLTVASHNSLCTGHIVLAGNEAQKRAYLPALATAE-------------KLGAWGLTEPGS 141

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GRVGCFLVPRLL 262
           G+D A + ++ +   D    +SG K F++   +   +++LA+ +    G+     +   +
Sbjct: 142 GSDAAGMRTRAEDRGDHF-VISGSKIFITQGTVGGTYVILARTDDPRPGKSAADGISAFV 200

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLD 319
             G   GL   + + K+G  ++ T  L F +        L V      + M +L    + 
Sbjct: 201 VPGDAPGLVRGKPEEKLGLHASDTTPLTFEDLVVPAENLLGVRGEAFRDVMAVLDGGRIG 260

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              M +   R +L  A  YA  R   G  +     +   IA++A ++ AA  L  + A  
Sbjct: 261 IGAMGIGLGRAALEIAAKYALEREQFGRPIAHNQGVSFKIAEMATELEAARLLVLKAAAL 320

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  +  AA A++   +     C         A++ +GG GYI E  + R +R++  
Sbjct: 321 KDAGRPFTMAAAQAKLKGSVAGVRACD-------HAIQILGGYGYIREYEVERLWRDARL 373

Query: 440 NSILLGSGNAMVLDVLN 456
             I  G+     L +  
Sbjct: 374 TRIGEGTDEIQHLIIAR 390


>gi|254429503|ref|ZP_05043210.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196195672|gb|EDX90631.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 383

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 134/380 (35%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            A  P    WD     P     +  +   G      D     +   +             
Sbjct: 22  KALAPFAAEWDAKSLFP--KDAIHEAGALGFCSLYCDEEHGGMGLSRLDAALIFEQLSQG 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  ++    +  M+           WA  + S E                   LTE
Sbjct: 80  CTSTTAFITIHNMATWMLTRFGNDTTRARWADVLMSGE-------------KLASYCLTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D A++++  +K  D  Y L+G K F+S    +D  +++A+  G  G   +     
Sbjct: 127 PGAGSDAASLSTTAKKDGDD-YVLNGAKAFISGAGDTDMLVLMART-GGSGAGGISCFAV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
                G+ Y R + K+G +S  T  +   +       L+G+                ++ 
Sbjct: 185 PADTPGISYGRNEMKMGWKSQPTRAVILEDARIPADCLIGEEGQGFRIAMAGLDGGRINI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  S+   + +L +A  Y + R   G  + D   ++  +AD+A ++ AA  +    A   
Sbjct: 245 ASCSLGAAQAALHQAQQYVQERKQFGQAIGDFQTVQFTLADMATELVAAQQMVRLAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  S         ++  + K     +   V  +A++  GG GYI E  + R+ R++  +
Sbjct: 305 DQNHSDK------SMLCAMAKRLATDLCFNVCNQALQLHGGYGYISEYPLERYVRDARVH 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            IL G+   M + +   + K
Sbjct: 359 QILEGTNEIMRVIIARNVLK 378


>gi|193078427|gb|ABO13413.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 387

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 142/395 (35%), Gaps = 27/395 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q +A   N          P    WD+ E  P    L +++   GL    +   +  +   
Sbjct: 11  QHIAFADNVRRFVQKEMTPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDA 68

Query: 131 QAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                  A + +           +      A  +    +  +       I S E      
Sbjct: 69  DPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQHFGSEELKARVLSGIISGE------ 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
                      L +TE  GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  
Sbjct: 123 -------KISALAITEPGGGSDVAALQTKAIRDGDN-YIVSGEKTFITSGIRADYYTVAV 174

Query: 248 QVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  + G   +  LL D    G+    LK K+G  ++ T  L F         LLG  N
Sbjct: 175 RTDPTKTGAEGISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQEN 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + +   +      +++     +   EA+ +A++R   G  LID  V++  + D+A
Sbjct: 234 AGFKVIMNNFNMERFFLGVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMA 293

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + +  AL    A    + K +  E         + K    +        A++ +GG G
Sbjct: 294 TQLTSTRALLEETAWKMTQPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMG 350

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++      R YRE   N I  G+   M   +   L
Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQL 385


>gi|207739095|ref|YP_002257488.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206592468|emb|CAQ59374.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 377

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 133/399 (33%), Gaps = 43/399 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               + AR   A    P    +   G   D V           +    GL   I    + 
Sbjct: 10  RMILDAARDFAAERLAPHAAQWDRDGSLPDDVV---------AQMGELGLLGMIVPLEWG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +      L   T      + P + +    
Sbjct: 61  GSYTDYVAYALALEEIAAGCAACATMMSVHNSVGCGPILKFGTDAQRARYLPDLATG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF- 243
                            LTE + G++   + ++   + DG + L+G K F+++       
Sbjct: 118 ----------RAIGAFCLTEPQAGSEANNLRTRAV-LRDGRWVLNGSKQFVTNGTRAKLA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R ++K+G R++ T  +   +         N
Sbjct: 167 IVFAVTDPGAGKRGLSAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVP---QAN 223

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E +KI L  L+   + ++   V +       A  YA  R   G  L +   +  
Sbjct: 224 LLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIAN 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A      K    E       A   K +  ++A  + ++A++
Sbjct: 284 MLADMATRLNAARLLVHHAARLRSLDKPCLSE-------ASQAKLYASELAEEICSKAIQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ + ++ RHYR++    I  G+     + +  
Sbjct: 337 IHGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|167818941|ref|ZP_02450621.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167827317|ref|ZP_02458788.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167897402|ref|ZP_02484804.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167914064|ref|ZP_02501155.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|217425455|ref|ZP_03456948.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226195174|ref|ZP_03790765.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237508663|ref|ZP_04521378.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|254187439|ref|ZP_04893952.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254198650|ref|ZP_04905070.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|157935120|gb|EDO90790.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169655389|gb|EDS88082.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|217391418|gb|EEC31447.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225932979|gb|EEH28975.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|235000868|gb|EEP50292.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 377

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|239820039|ref|YP_002947224.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804892|gb|ACS21958.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 592

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 84/464 (18%), Positives = 163/464 (35%), Gaps = 51/464 (10%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V+  P +         +G         F               ++  A +        S 
Sbjct: 72  VQTPPGFKKAYDEFTKNGWAGLGCSPEFGGQGFPSVVANAVYEVFGGANMAWSSYPGMSH 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   V+   +      + PKI S E+  T             + LTE   GTD+  + +
Sbjct: 132 ATYVNVSANGSEAQKALYLPKIASGEWAGT-------------MCLTEPNAGTDLGLMRT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDG 265
           +     DG Y ++G K F+S    D       ++LA++         +  F+VP+ + D 
Sbjct: 179 RAVAQPDGSYSITGSKIFISGGEQDLTENIMHLVLARMPDAPPGVKGISLFIVPKFIPDA 238

Query: 266 SPNG-----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +        +    +++K+G   N+T  + F    G+LLG  +     +      + +  
Sbjct: 239 NGAAGARNAVVCGSIEHKLGIHGNSTCTINFDGATGWLLGAPHKGLAGMFVQMNHMRVLV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAA 369
            ++++  M  +  +A+ YA+ R                 +I    ++R +     +I  A
Sbjct: 299 GMIAIGLMEAAYQKALAYAKERLQGRAIGARPSGDAVDPIIGHADVRRMLLTQKANIEGA 358

Query: 370 TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            AL+   +   D      +   R+E A    ++ P+ K     +A      AM+  GG G
Sbjct: 359 RALALWTSQLSDVQRLHPDPAKRNETAELLGLLTPLVKALSSDLAVECTLLAMQVFGGHG 418

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK 481
           YI E  + +H R+     +  G+     +D+L   +L                   +   
Sbjct: 419 YIRENGVEQHLRDVRIVGLYEGTNGVQAMDLLGRKVLADQGRQMGAFLDMAGAFAETCSP 478

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
           +    +R+      E     R LT ++  A+SA   + AG   +
Sbjct: 479 R--EAMREFTQPLIELAAEIRQLTGELV-AASARDPHAAGAAAV 519


>gi|32967544|gb|AAP92447.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens]
          Length = 467

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 145/388 (37%), Gaps = 49/388 (12%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    +  +   + P +++  +             A  + LT    GTD+  I ++
Sbjct: 10  ACLSINAHASEELKATYLPNMYAGVW-------------AGSMCLTGPHAGTDLGIIRTK 56

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +  +DG Y +SG K F++    D       ++LA++         +  FLVP+ + +  
Sbjct: 57  AEPRADGSYAISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNAD 116

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              G  N +    +++K+G +++AT  + F    G+L+G+ N     +  M     L   
Sbjct: 117 GSLGERNPVTCGSIEHKMGIQASATCVMNFDQAIGYLVGEPNKGLAAMFTMMNYERLGVG 176

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAA 369
           I  ++    S   AI YAR R  S               +I  P ++R +  +       
Sbjct: 177 IQGLATGERSYQNAIEYARDRLQSRSPTGPQAKDKVADPIIVHPDVRRMLLTMKAANDGG 236

Query: 370 TALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            A S  +A   D AK      +R    +   ++ P+ K +   +         +  GG G
Sbjct: 237 RAFSTYVAMQLDTAKFSEDPDTRKRAESLVALLTPVAKAFLTDLGLETTVHGQQIFGGHG 296

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK 481
           YI E    +  R+     I  G+     LD++   ++  G   ++     +     ++ +
Sbjct: 297 YIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATADE 356

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIA 509
           +     R   +       L  ++ ++ A
Sbjct: 357 QWGEFTRPLNAALDNLDELTAWVLDRSA 384


>gi|195111940|ref|XP_002000534.1| GI22465 [Drosophila mojavensis]
 gi|193917128|gb|EDW15995.1| GI22465 [Drosophila mojavensis]
          Length = 407

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 139/375 (37%), Gaps = 32/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+   +P     +RR    GL        +                        
Sbjct: 50  PHARRHDRERLYPV--EQVRRLGELGLMSVTVQEEYGGTGLDYQAYAIGMEEVARGDAAV 107

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +      V    T    + +               P  +        L+E   G
Sbjct: 108 SIVMGVNNLYLGAVQQHGTEAQKQQFL-------------VPYTQGQHIAFYALSEPGSG 154

Query: 209 TDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D +A ++  +  + G Y L+G K W  +S  +   I+ A ++  +    +   L + + 
Sbjct: 155 SDASAASTTAKLNAGGDYLLNGTKAWISNSKEASGGIIFATIDKSLKHKGITAFLTEKNV 214

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G  +++T +L   +          V   P    +I +  LD   + ++
Sbjct: 215 PGLAIAKNESKMGMCASSTCQLTLDDVCVPQSQ---VLGSPGGGFRIAMESLDCGRIGIA 271

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                +A+A     + YA +R   G  L    ++++ +AD+AL +  A  L++R A   D
Sbjct: 272 AQSTGIAQAALELALDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLTWRAAWLKD 331

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S ++EAA A++ A  T  +C         + ++ +GG GY  +     +YR +    
Sbjct: 332 NGMSITKEAAMAKLHASETATYC-------AHQCIQILGGMGYTTDLPAEMYYRNARVTE 384

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     + + N
Sbjct: 385 IYEGTSEIQRIVIAN 399


>gi|311899012|dbj|BAJ31420.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 400

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 133/386 (34%), Gaps = 35/386 (9%)

Query: 96  KVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   +   +   GL        +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTAIVEGMKQLGLFGLTIPEEYGGLGESLLTYALVVEEIARGWMSVSGIVNT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+A   TP   + + P++ + E             +     ++E   G+D++AI
Sbjct: 95  HFIVAHMIAAHGTPEQKEHFLPRMAAGE-------------LRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP----- 267
           +++G +  D         W  +   S    +L + +  G      +   L + +P     
Sbjct: 142 STKGVRDGDSYVLNGQKMWLTNGGTSSLVAVLCRTDEGGSTPYKNMTTFLIEKTPGFGPN 201

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDS 320
               GL       K+G +   T EL   +        L G        + D   +  ++ 
Sbjct: 202 ATVPGLTVPGKIEKMGYKGVDTTELVLQDVRVPADRVLGGVPGRGFYQMMDGVEVGRVNV 261

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A       R +    I YA++R   G  + +   ++  +A++A  + AA  +    A   
Sbjct: 262 AARGCGVARRAFELGIAYAQQRVTFGKKIAEHQAIQFKLAEMATKVEAAHQMMVMAARRK 321

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EA  A+ +A        +    V+ ++    GG G+ +E  I R YRE+P  
Sbjct: 322 DGGQRNDLEAGMAKYLA-------SEYCKEVVEDSFRIHGGYGFSKEYEIERLYREAPML 374

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE 466
            I  G+     + V   L +   L +
Sbjct: 375 LIGEGTAEIQKMIVGRRLLEEYRLAD 400


>gi|115655543|ref|XP_794484.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 273

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 115/286 (40%), Gaps = 17/286 (5%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           +        L ++E   G+D+ ++  + ++  D         W  + P +D  ++ A+ +
Sbjct: 1   LISGEHIGALAMSESGSGSDVVSMKLKAERKDDHYLLNGSKFWITNGPDADVLVVYAKTD 60

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVST 306
            G      +   L +   +G    +  +K+G R + T EL F +    +   +G LN   
Sbjct: 61  LGVEPSQGITTFLIEKGMDGFSTAQKLDKLGMRGSNTCELVFEDCKVPVENVMGSLNKGV 120

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +     L  L  A   +  M+ +   A  Y  +R   G  + +  +M+  +AD+   +
Sbjct: 121 YVLMSGLDLERLVLAAGPIGLMQAACDVAFPYLHQRKQFGRPIGEFQLMQGKMADMFTRL 180

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  +  + +A + D     + + A   ++A        + A  V  +A++C+GG+GYI 
Sbjct: 181 NSIRSYVYNVARAADRGHVSARDCAGVILVAA-------ETATQVCLDAIQCLGGNGYIN 233

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
           +    R  R++    I  G+           L  G +  E+  STL
Sbjct: 234 DYPTGRLLRDAKLYEIGAGTSEV------RRLIIGRSFNEEFKSTL 273


>gi|17548873|ref|NP_522213.1| acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17431123|emb|CAD17803.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 377

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 130/399 (32%), Gaps = 43/399 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               + AR        P    +       D V           +    GL   +    + 
Sbjct: 10  RMILDAARDFATERLAPHAAQWDRDSRLPDDVV---------AQMGELGLLGMMVPPEWG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +      L   T      + P + +    
Sbjct: 61  GSYTDYVAYALALEEIAAGCAACATMMSVHNSVGCGPILKFGTDAQKARYLPDLATG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAF 243
                            LTE   G++   + ++     DG + L+G K F+++   +   
Sbjct: 118 ----------RAIGAFCLTEPHAGSEANNLRTRAVPR-DGHWVLNGSKQFVTNGARAQLA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R ++K+G R++ T  +   +         N
Sbjct: 167 IVFAVTDPDAGKRGISAFIVPTQTPGFHVGRPEHKLGIRASDTCPITLEDCAVPA---AN 223

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E +KI L  L+   + ++   V +       A  YA  R   G  L +   +  
Sbjct: 224 LLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIAN 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A      K    E       A   K +  ++A  + ++A++
Sbjct: 284 MLADMATRLNAARLLVHHAARLRSADKPCLSE-------ASQAKLYASELAEEICSKAIQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG GY+ + ++ RHYR++    I  G+     + +  
Sbjct: 337 IHGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIAR 375


>gi|323452208|gb|EGB08083.1| hypothetical protein AURANDRAFT_71689 [Aureococcus anophagefferens]
          Length = 1636

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 85/445 (19%), Positives = 158/445 (35%), Gaps = 57/445 (12%)

Query: 57   ELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW-DK--VEFHPAWHALLRRSIH 112
            + E +    L     E+A+        L  A    G  W D+  V     + A   + + 
Sbjct: 1049 DREHVNAETLDMVLTEVAKFCENELAPLNEAGDAEGCTWVDERTVTTPKGYKAAYDQFVE 1108

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
             G     +   +       ++ I  A +   A          S  + + +    T  +  
Sbjct: 1109 GGWQGLSFPEKYGGQELPYSYSIFQADMMATANWTWTMYPGLSKGAINTIYSHCTEELKD 1168

Query: 173  DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
             + P + S E+  T             + LTE   G+D+A + ++     DG Y ++G K
Sbjct: 1169 KYLPPLVSGEWTGT-------------MCLTEPACGSDLAQVATKAVPNGDGSYKITGTK 1215

Query: 233  WFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE--DGSPNGLC---YQRLK 276
             F+S    D        +LA++ G       +  FLVP+ L   DG+          R++
Sbjct: 1216 IFISCGDHDMTDNVLHCVLARLPGAPEGTKGISLFLVPKHLVGDDGAVGDFNKTNIGRIE 1275

Query: 277  NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +K+G   ++T E+ F  + G+L+G  N     +        L +A+  V+   ++    +
Sbjct: 1276 DKMGCHGSSTCEINFDESAGWLIGSENKGLNHMFTFINTSRLGTAMQGVAAAELAFQNGL 1335

Query: 337  HYARRRHVSGG---------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             YA+ R                     +I  P ++R +           ++ F  A   D
Sbjct: 1336 PYAKDRLAMRALDRKNVDREPDKAADPIIAHPDVRRMLLTQKAVAEGGRSMVFECALIVD 1395

Query: 382  EAKSRSEEAAYARIMA---------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            E +  +E    A+  A         PI K +  +M        ++  GG GYI+     +
Sbjct: 1396 EMQLATEAGDTAKYEALDDRLGFLTPILKGYLTEMGVEAANLGIQIFGGHGYIKSNKQEQ 1455

Query: 433  HYRESPANSILLGSGNAMVLDVLNL 457
              R++    +  G+     LD+L  
Sbjct: 1456 VVRDARIAPVWEGTTQIQALDLLGR 1480


>gi|91078368|ref|XP_974064.1| PREDICTED: similar to CG12262 CG12262-PA [Tribolium castaneum]
 gi|270003887|gb|EFA00335.1| hypothetical protein TcasGA2_TC003174 [Tribolium castaneum]
          Length = 415

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 118/362 (32%), Gaps = 32/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++++   GL           + +                      +  S      V 
Sbjct: 69  KELIKKAWSLGLMNGHIPEYLGGLQQGVFDICLTGEELAYGCTGIFTAVDSSNLGQIPVV 128

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    K +  +                  +     +TE   G+D++ I ++  K   
Sbjct: 129 IAGTKDQQKKYLGRFLDE-------------PLVAAYAVTEPGAGSDVSGIKTKAVKKGS 175

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  +  +++ + +LA+      C         + +    G+   R +  +G
Sbjct: 176 EWVLNGQKMWITNGGVANWYFVLARTNPDPKCPAGKAFTGFIVERDFPGVTPGRKELNMG 235

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R++ T  + F +    ++   NV  G     KI +          A  +    +  L E
Sbjct: 236 QRASDTRGITFEDV---VIPQENVLLGEGAGFKIAMSTFDKTRPSVACGATGLAQRCLDE 292

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y+  R   G  ++    +   +AD+A+ +  A     + A   D+    S  AA   
Sbjct: 293 ATKYSLERKTFGVPIVYHQAVAFMLADMAIGVETARLAWMKAAWEADQGIRNSLSAA--- 349

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               I K    ++A    ++A++  GG+G+  E  + +  R++    I  G+     + +
Sbjct: 350 ----IAKAHASEVANKNASDAVQVFGGAGFNSEYPVEKLMRDAKIFQIYEGTTQIQKIVI 405

Query: 455 LN 456
             
Sbjct: 406 SR 407


>gi|325122834|gb|ADY82357.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 381

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 133/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPQYDQWEREGIMP--RSVWNQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LADTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A  A   R   
Sbjct: 245 AIASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|293609569|ref|ZP_06691871.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828021|gb|EFF86384.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 380

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 133/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 20  EHIAPQYDQWEREGIMP--RSVWNQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 77

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 78  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 125 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 184 LADTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 243

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A  A   R   
Sbjct: 244 AIASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVA 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 304 LYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 356

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 357 IQRIYGGTNEIMKEIVARGL 376


>gi|84501959|ref|ZP_01000117.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389954|gb|EAQ02588.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 385

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 120/362 (33%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
               + +   G+        +            A  +Y   +                 +
Sbjct: 45  REFWKSAGQQGIMGGSIAEDYGGFGGGI--GFDAITVYEQGRTGDMGWGYGIQSIVIHYI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K W PK+ S                   + +TE   G+D+  + +  +K  
Sbjct: 103 DAYGSEEQKKKWLPKLVSG-------------DRVAAIAMTEPGTGSDLQNVQTHAEKDG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGN 281
           +         +  +   +D  I++A+ +   G   V  ++ E     G    R   K+G 
Sbjct: 150 NHYRINGSKNFITNGHTADLVIVVAKTDRGAGAKGVSLIVLETEDAEGFRRGRNLKKLGM 209

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           + + T EL F +        L      G  + MK L    L   I ++  +  ++AE + 
Sbjct: 210 KGSDTAELFFEDVRVPTANLLGPEEGQGFYQLMKQLPWERLMIGITALGFIDFAIAETVK 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  ++D    +  +A+         +         ++  +R E        A
Sbjct: 270 YVQDRKAFGSRIMDFQNTRFKLAECKTKAELLRSFV-------NDGIARLEAGELDAATA 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K+W  +    V+ E ++  GG G++ E  IAR Y +S    I  G+   M   +   
Sbjct: 323 SMAKWWGSQTQNEVMHECLQLHGGYGFMMEYPIARLYADSRVQMIYGGTNEIMKELIARS 382

Query: 458 LE 459
           ++
Sbjct: 383 MD 384


>gi|224083578|ref|XP_002192846.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 395

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 51  PYMAEWDEKEIFPV--ETMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTST 108

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS       M+         + + P + S E                   LTE   G
Sbjct: 109 TAYMSIHNMCVWMIDTFGNEEQRRRFCPSLCSME-------------KFASYCLTEPGSG 155

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  Q+  D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +   
Sbjct: 156 SDAASLLTSAQRKGD-TYVLNGSKAFISGGGDTDVYVVMCRT-GGPGPKGISCLVLEKGM 213

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +     G  LG                 ++ A  S
Sbjct: 214 PGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVGNRLGAEGQGFSIAMQGLNGGRINIASCS 273

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L +   ++  +A++A  + AA  +    A +  E +
Sbjct: 274 LGAAHASVLLAQEHLTVRKQFGEPLANNQYLQFGLAEMATRLLAARLMVRNAARALQEGR 333

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A ++  + K +       +  +A++  GG GY+++ ++ +  R+   + IL 
Sbjct: 334 QD------AAVLCSMAKLFATDECFGICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILE 387

Query: 445 G 445
           G
Sbjct: 388 G 388


>gi|296165479|ref|ZP_06848012.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899170|gb|EFG78643.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 145/391 (37%), Gaps = 39/391 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A    P  H +     R D+  F          +   G++    D  +     +  ++ 
Sbjct: 21  LAREVVPHQHDWDRD-HRIDRDVF--------AHAAKAGIYALEVDARYGG-AGEHDYRY 70

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALM----TTPRVHKDWAPKIFSREYDPTNKAPM 191
           R      +A++ A            +V       T+    + W P+  S E         
Sbjct: 71  RMVVCEEIARINALSFGLTISLQDDLVLHYLLDLTSEEQKQRWLPRFASGE--------- 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE 250
               +   L +TE   G+D+ AI +  ++  D  + L+G K F+SS  MSD  ++ A  +
Sbjct: 122 ----LIGALAMTEPGAGSDLRAIRTSARRDGDH-WVLNGQKTFISSGIMSDLIVVAACTD 176

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G       + +    G    R  +KIG  +  T EL F +    +   L      ++
Sbjct: 177 QEAGSRGFSLFVVERDTPGFRRGRQLDKIGLPAQDTAELFFDDARVPVENLLGKEGSGLQ 236

Query: 311 DMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +        L     +++  R      + Y R+R   G  L  +  ++  +A+++ ++ 
Sbjct: 237 YLMSHLPRERLGVTAQAIATTRAIFDLTVEYCRQRKAFGQPLTAKQHIRFELAEMSTELD 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A A   +   +F+  +    +AA  +        +  ++   +I   ++  GG GY+ E
Sbjct: 297 IAEAYVDKSVEAFNAGELSPVDAAKGKW-------YVSELQHRLIDRCLQLHGGYGYMLE 349

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +AR Y ++ A +I  G+   M   +   +
Sbjct: 350 YPVARAYLDTRAQTIYGGTTEIMKELIGRQI 380


>gi|67043767|gb|AAY63982.1| putative acyl-CoA dehydrogenase [Lysiphlebus testaceipes]
          Length = 282

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 107/274 (39%), Gaps = 18/274 (6%)

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-- 253
           +     +TE   G+D+A + ++ +K  +         W  +  +++ + +LA+       
Sbjct: 11  IVAAYCVTEPGAGSDVAGLKTKAEKKGNEWIINGTKMWITNGGVANWYFLLARTNPDPEA 70

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
                    + D    G+   R +  +G R++ T  + F +       + N+  G     
Sbjct: 71  PSNKAFSAFIIDRDTPGITPGRKELNMGQRASDTRMVTFEDVRVP---NENILIGEGAGF 127

Query: 313 KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +          A  +V     ++ EAI Y+  R   G ++ +   +   IAD+++ I
Sbjct: 128 KIAMETFNKTRPPVACGAVGLAHRAMDEAIKYSLERKAFGKVIAEHQAVAFMIADMSIGI 187

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A     + A + D  +        A  +A I K +   MA    ++A++  GG+G+  
Sbjct: 188 ETARLAWMKAAWAADNKEPN------ALALASIAKCYAADMANKCASDAVQIFGGAGFNS 241

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  + +  R++    I  G+     L +   L +
Sbjct: 242 DYPVEKLMRDAKIYQIYEGTSQIQRLIISRYLLQ 275


>gi|307106480|gb|EFN54726.1| hypothetical protein CHLNCDRAFT_24676 [Chlorella variabilis]
          Length = 455

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 71/450 (15%), Positives = 148/450 (32%), Gaps = 38/450 (8%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG-----PGGERWD 95
           + L  L A       + L             E A  A+     +  +      P     D
Sbjct: 16  AALDRLPAAGLLAGARRLSAQPAPAAEHHDDESA--ADEFRDSVRTFAQDFVAPHAAEID 73

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSP 154
           ++  +P      RR+   GLH          +      H I    L   +   A    + 
Sbjct: 74  RLNAYPPGFEFWRRAGEWGLHGITVAEQHGGLGLGYLQHCIAMEELSRASGSVALSYGAH 133

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S    + +      +    + P++ + +    ++ P         L ++E   G+D+ ++
Sbjct: 134 SNLCINQLVRNANQQQLDKYLPQLLTGKAAADSRRP--AWEHVGALAMSEPNAGSDVVSM 191

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-----G 269
             + ++  D         W  + P++D  I+ A+ +   G   +   + +         G
Sbjct: 192 RMRAERRGDRYVLDGSKMWITNGPIADTLIVYAKTKADAGPHGITAFIIEKGMQARRGAG 251

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-----------MKILIYL 318
               +  +K+G R + T EL F          L                      ++  L
Sbjct: 252 FSTAQKLDKLGMRGSDTCELLFEGCEVPAENVLGQENQASGGAPARLCRLWGVYVLMSGL 311

Query: 319 DSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D   + +S      M+  L   + Y   R   G  + +  +++  +AD+     AA +  
Sbjct: 312 DYERLVLSAGPLGLMQACLDTVLPYVHERQQFGAKIGEFQLIQAKLADMYTTTQAARSFI 371

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A + D  ++  ++             +  + A  +  +A++ +GG+GYI E    R 
Sbjct: 372 YATARAADAGRASRKD-------CAAVILYSAEAATRMALDAIQILGGNGYINEYPTGRL 424

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            R++    I  G+     + +   L K T 
Sbjct: 425 LRDAKLYEIGAGTSEIRRILIGRELFKETR 454


>gi|183221677|ref|YP_001839673.1| acyl coenzyme A dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911751|ref|YP_001963306.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776427|gb|ABZ94728.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780099|gb|ABZ98397.1| Acyl coenzyme A dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 376

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 131/373 (35%), Gaps = 29/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W+K    P    + R++  +GL C      +        + I             
Sbjct: 28  PHHEEWEKNHIVP--KEVWRKAGDNGLLCPDVPAEYGGSGADFLYNIIIIEESSRVGNSG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +   A  ++        K W PK  S E               + + +TE   G
Sbjct: 86  FFISLHNDVIAPYISTYANDEQKKRWLPKCASGE-------------SILAVAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+ ++ +      D     +G K F+S+      I+ A          +  L+ +    
Sbjct: 133 SDLKSLRTSAVDKGDHFVV-NGQKTFISNGQLADLIITAVKHDNGT---ISLLMIEEGMK 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +KIG ++  T EL F++       L+G        +        L  A+ +V
Sbjct: 189 GFERGRNLDKIGLKAQDTSELYFNDVIVPKTNLIGKQGQGFRYLMQKLAQERLVLAVAAV 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R+     + Y + R   G  +      K  +A++A ++  A     ++     + ++
Sbjct: 249 EATRLVQTITLQYIKERKAFGQKIGSFQNTKFKMAEMATELEMAQVFCDKVVMEHMKGEN 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EA+         K++  +M      E ++  GG GY+ E  IAR Y ++   +I  G
Sbjct: 309 TTAEASM-------CKWYATEMQKRHTDECLQFFGGYGYMMEYPIARAYLDARIQTIYAG 361

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   L
Sbjct: 362 TTEIMKEIIGRSL 374


>gi|302548205|ref|ZP_07300547.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302465823|gb|EFL28916.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 388

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 134/382 (35%), Gaps = 29/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D    +P   AL+ +    G+        +          +          +  
Sbjct: 28  PVAQGLDHANTYPE--ALIEQMKELGIFGLAIPEEYGGTPVSTPCYVLVTEELARGWMSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M      A ++    T    + + P++ + E   T             + LTE  GG
Sbjct: 86  AGAMGGHTVVAKLLLHFGTEEQRRRYLPRMATGEIRAT-------------MALTEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGS 266
           +D+ A+ +  ++  D         W  +S  S    +L + +         +  LL +  
Sbjct: 133 SDLQAMRTVARRDGDDFVVNGTKTWITNSRRSQLIALLCKTDPDASPAHKGISILLVEHG 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAI 322
           P GL   R   K+G +   + EL F +        L      G  + MK L    L  A 
Sbjct: 193 P-GLTVSRDLPKLGYKGVESCELSFEDYRAPADAVLGGAEGKGFAQMMKGLETGRLQVAA 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A   D 
Sbjct: 252 RALGVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTAARQLTLYAAREADA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       K +  + A  +   A+   GG GY  E  + R++R++P   +
Sbjct: 312 GRRVDMEAGMA-------KLFASETAMQIALNAVRIHGGYGYSTEFDVERYFRDAPLMIV 364

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+       + + L K   L
Sbjct: 365 GEGTNEIQRNVIASQLVKRGGL 386


>gi|77463725|ref|YP_353229.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77388143|gb|ABA79328.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 379

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 138/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q +  MA     +     P    W++    P    L  +    GL       
Sbjct: 2   DFALSEEQQAIFDMARAFGAE--EIAPHARAWEEAGTIP--RTLWPKVAELGLGGVYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +           MA       +S     A M+    +  +   W P I    
Sbjct: 58  DHGGSGLGRLDATLVFEALAMACPSVAAFLSIHNMCAGMIDRYGSEELKARWLPGIC--- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                       +  +   LTE   G+D AA+ ++     +G Y LSG K F+S    SD
Sbjct: 115 ----------ALTTLVSYCLTEPGAGSDAAALRTRADATPEG-YRLSGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
           A++ + +  G  G   +  LL      GL +  L++K+G R+  T +++F         L
Sbjct: 164 AYLTMCRT-GGAGPKGISTLLVPAGTPGLSFGGLEDKMGWRAQETRQVQFDECLVSTDLL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                L+ A  ++ G + +      Y   R   G  L     ++  
Sbjct: 223 VGEEGQGFAYAMAGLDGGRLNIAATALGGAQAAFDATRAYMAERKAFGQRLDGFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ + +  A     + A   D+          A     + K      A  V  + ++ 
Sbjct: 283 LAEMEVKLQQARIFLRQAAWKLDQGAPD------ATKFCAMAKLAVTDSAFEVANQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + V   L
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIVARAL 376


>gi|229492562|ref|ZP_04386365.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229320548|gb|EEN86366.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 383

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 137/419 (32%), Gaps = 43/419 (10%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
                PS    E+  + E       +EL   A         +     R D+      W  
Sbjct: 2   ATKRKPSWHDDEIAAVAELARGFFDRELI--AKR-----EQWDAQ-HRVDR----SVWLE 49

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
               +   GL C      +       AH +            A      S   A  V   
Sbjct: 50  ----AGKLGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYCGDYALGNSVHSGIVAHYVLEY 105

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    K W P + + E             +   +G+TE   G+D+ AIT+   +  D  
Sbjct: 106 GSEEQKKAWLPGMATGE-------------ILGAIGMTEPGTGSDLKAITTSAVRDGDH- 151

Query: 226 YCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRS 283
           Y ++G K F+++  S   I+LA + + + G   V  L+ D     G    R+ +K+G   
Sbjct: 152 YVVNGSKTFITNGGSADMIVLAVKTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHG 211

Query: 284 NATVELEFSNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL F++    +         +  G +    +   L     ++  +  ++ E + Y 
Sbjct: 212 ADTSELSFTDVRVPVSNLLGESEGLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYT 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L +       +A+                   D               A +
Sbjct: 272 KARQAFGHSLFEFQNTAFELAECQTIARTCRVF-------LDNCIEDHLNGELDGADAAM 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            KYW  +   AV+   ++  GG GY+ E  IAR Y +S    I  G+   M   +   L
Sbjct: 325 VKYWLTEQQCAVVDRCVQLYGGYGYMREYPIARMYEDSRVQKIYAGANEVMKGIIAKSL 383


>gi|167741753|ref|ZP_02414527.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
          Length = 377

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRGLSAFVVPTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    R + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGRPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|302341475|ref|YP_003806004.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
 gi|301638088|gb|ADK83410.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075]
          Length = 386

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 144/375 (38%), Gaps = 29/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  ++W++    P      RR    G     +   +          +        +++  
Sbjct: 27  PHADQWEQARAIP--RQAFRRMGELGFLGVCFPEEYGGAEGDIFMAMALLEELARSRMGG 84

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +      +   +    +  + + +     S E                 LG+TE  
Sbjct: 85  FAAAVAVQQFMAPQHIHKYGSEELKRKYLAGSISGEM-------------VGALGVTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+AAI ++  +  D  Y ++G K F+++     FI LA + E   G   +  ++ D 
Sbjct: 132 AGSDVAAIRAKASRQGDH-YLINGAKTFITNGADGHFITLACKTEPGAGARGISLIVVDL 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G+   R   K+G  ++ T EL F +       L+G  N     +     L  L  A 
Sbjct: 191 DAPGVSCTRRLEKMGWHASDTAELTFEDVRAPLANLVGQENKGFYYIMQAFQLERLACAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M +   ++ L  A+ Y   R+  G  L +   +   +A+++    AA  L++  A  +  
Sbjct: 251 MGLGLAQLCLEHAVKYMGERNAFGAPLSNLQALAHRLAELSARQEAARQLTYHAAWLYQN 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 + + A+++A       C++A  V  E ++  GG G +EE  +AR  R+S   +I
Sbjct: 311 DLPCVAQCSMAKLLA-------CELAKRVADECLQFFGGYGLMEEYPMARLLRDSRLGTI 363

Query: 443 LLGSGNAMVLDVLNL 457
           + G+   M   +  L
Sbjct: 364 VAGTSEVMREIIARL 378


>gi|300790236|ref|YP_003770527.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799750|gb|ADJ50125.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 378

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 128/349 (36%), Gaps = 33/349 (9%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +          ++       A +  G  +S    S   +    T      W P +
Sbjct: 57  PYSERWGGGDVSYEVYLQVLEEIATAWMTVGVGLSVHTMSCYALTQYGTDEQRDRWLPDM 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                         + S+     L+E + G+D AA++++ +             W   + 
Sbjct: 117 L-------------EGSLLGAYALSETQAGSDAAALSTRARLDGPDYVVNGTKAWITHAG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D +  + +     G   +  LL DG+  GL     + K+G   + T ++ F N     
Sbjct: 164 VADFYTTMVRT----GPDEISCLLVDGATEGLSAAPRERKMGLTGSPTAQMIFENARVPA 219

Query: 299 LGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +   P   ++I +       L  A  +V   + +L EA+ YA+ R   G  +ID 
Sbjct: 220 ---ERLLGAPGAGLRIALSSLSSGRLGIAACAVGLAQAALDEAVAYAKGRSQFGRPIIDF 276

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+A  + A+ AL    A   D     + +       A I K      A  V 
Sbjct: 277 QGVEFLLADMAATVEASRALYLDAARRRDRGMPFNRQ-------ASIAKLVATDGAMKVT 329

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +A++ +GG+GY  +  + R+ RE+    I  G+     L +   L+  
Sbjct: 330 TDAVQVLGGAGYTRDFPVERYMREAKVPQIFEGTNQIQRLVIARELKNA 378


>gi|121603717|ref|YP_981046.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592686|gb|ABM36125.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 563

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 94/546 (17%), Positives = 184/546 (33%), Gaps = 67/546 (12%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGERWDK----- 96
           L  ++         +L  L E   +   +++   A       +      G+         
Sbjct: 15  LFDVLR--AQDTLGQLPALAESADTDLMRQVLEEAGKFVGEVVAPLNRDGDEIGARFKDG 72

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V   P + A  +     G                   ++     +L A      +    
Sbjct: 73  AVTMPPGFRAAYQAFWQAGWPALSGAPEDGGQGLPTVLEM-VLYEWLSAANHGWTMAPGL 131

Query: 156 VTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  A   +    +  +   +  K+ S E+                + LTE   G+D+   
Sbjct: 132 LHGAYECIKHHASDELKARYLEKVASGEW-------------LATMCLTEPHAGSDLGLA 178

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           +++     DG + +SG K F+S    D       ++LA++         +  FLVP+  E
Sbjct: 179 STRAVPQPDGSFQISGTKIFISGGEHDLSDNIVHLVLARLPDSPSGPKGLSLFLVPKFYE 238

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS + +  +R++ K+G   + T  + F    G+L+G+       +  M     L  A+ 
Sbjct: 239 DGSRSAVFCERIEEKMGLHGSPTCVMRFDQATGWLVGEHGKGLNAMFLMMNAARLHVALQ 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATAL 372
            V  +  +  +A  YA+ R                 +I  P ++R +      + A   L
Sbjct: 299 GVGLLDAAWQKADAYAQERRQMRAPGPRDPSQAADLIIRHPAVQRLLDTQRAWVDAGRLL 358

Query: 373 SFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +++ A   D AK       R +   +  ++ P+ K      A    ++ ++  GG GY+ 
Sbjct: 359 AYQTAIELDVAKHHPDPARRQQAGQWCALVTPVLKASWTDQAFHGSSDCLQVFGGHGYVR 418

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL-------G 477
           E  I +  R+S    I  G+      D+L   +L         + S L+ DL        
Sbjct: 419 EWGIEQIVRDSRVAMIYEGTNEIQAQDLLFRKVLSDQGRGLGAVLSGLQADLQGGNSASA 478

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
              ++    LRD ++  +   G A      +A       L    +  +A  +  +R    
Sbjct: 479 QRTQEGFARLRDLLAAIESSGGAAPEKLYSVA----GDFLRATTIALMAWAW--SRLEAA 532

Query: 538 CHSTHC 543
               + 
Sbjct: 533 GAPGNG 538


>gi|298486286|ref|ZP_07004349.1| Butyryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159293|gb|EFI00351.1| Butyryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 383

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 139/399 (34%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHTWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  + ++G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPQLGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +    A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLQA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A+  L    A      +    E       A   K +  +MA  V ++A++  G
Sbjct: 288 DMHTRINASRLLILHAARLRSAGQPCLSE-------ASQAKLFASEMAEWVCSKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRLLIARELR 379


>gi|299769371|ref|YP_003731397.1| putative acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298699459|gb|ADI90024.1| putative acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 381

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 132/380 (34%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWNQLGENGYLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LADTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R ++  A  Y + R   G  +      +  +A   +D  A  A   R   
Sbjct: 245 AIASTAIGAIRGAIDLATAYVKERQAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSSDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|116624770|ref|YP_826926.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116227932|gb|ABJ86641.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 599

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 86/444 (19%), Positives = 158/444 (35%), Gaps = 37/444 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMV 162
            ALLR++   GL       ++  +   +      A  +  +A           + +   +
Sbjct: 69  KALLRKAGELGLMSVDVPEAYGGLEMDKVTSALIAESISKLASFSVAFSAHVGIGT-LPI 127

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ + E+                  L+E    +D     ++    +
Sbjct: 128 VWYGTAAQKQKYLPKLATGEW-------------IGAYALSESSSASDAMNCRTRAVLSA 174

Query: 223 DGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG  Y L+G   W  +S  +D F + A+V+G          L +    G      ++K+G
Sbjct: 175 DGTHYVLNGEKMWITNSGFADLFTVFAKVDGEK----FSAFLIERGTPGFAVGAEEHKLG 230

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R ++T  L  ++       LLG++        ++  +         V G R  L +AI 
Sbjct: 231 IRGSSTCPLILADCQVPVENLLGEIGKGHHIAFNILNIGRFKLGAACVGGARNGLQDAIG 290

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------ 391
           YA+ R   G  + +  +++  +A+ A  I A  A+ +R     D A +  +  A      
Sbjct: 291 YAKERKAFGKSISEFGLIQEKLAESAAGIYAGEAMVYRAIGMIDAALADVDTKAEGASRE 350

Query: 392 ------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +   I K W  +M   V+   ++   G GY+EE    R YR+S  N I  G
Sbjct: 351 IQKRIEEYAVECSILKVWASEMLDMVVDHVVQIYAGYGYVEEYPAERAYRDSRINRIFEG 410

Query: 446 SGNAMVLDVLNLLEKGTNLFEQ-LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           +     L +   L K     +  L   +++ +                L  E   L    
Sbjct: 411 TNEINRLIITGWLMKRAVAGQLPLMGAIKKLMDEVMSGPTAAEEREGPLSAEHHLLTNVK 470

Query: 505 TEKIALASSAAALYRAGMNDIADV 528
              +  A +A+  Y  G+ D  +V
Sbjct: 471 KLALFAAGAASQKYMMGLGDQQEV 494


>gi|254696103|ref|ZP_05157931.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|261216537|ref|ZP_05930818.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|260918144|gb|EEX85005.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 380

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 120/349 (34%), Gaps = 25/349 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------ICKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+  
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQ 367


>gi|147903727|ref|NP_001087662.1| MGC81873 protein [Xenopus laevis]
 gi|51703486|gb|AAH81056.1| MGC81873 protein [Xenopus laevis]
          Length = 422

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 131/405 (32%), Gaps = 46/405 (11%)

Query: 66  LSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LS   +E    A         P    Y   GE       +P    L++R+   GL     
Sbjct: 42  LSEQQKEFQATARKFAREEVMPVAAHYDKTGE-------YPV--PLIKRAWELGLMNGHI 92

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +  +                        +  +      V +       K +  ++  
Sbjct: 93  PEQYGGLALGIFDTCLITEEIAYGCTGVQTAIEANSLGQMPVIIAGNEAQQKKYLGRMT- 151

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                       +  +     +TE   G+D+A + ++ +K  +         W  +   +
Sbjct: 152 ------------EEPLMCAYCVTEPGAGSDVAGLKTRAEKKGNEYIINGQKMWITNGGKA 199

Query: 241 DAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           + + +LA+                + D +  G+   R +  +G R + T  + F +    
Sbjct: 200 NWYFLLARTNPDPKVSAGKAFTGFIVDANSPGIQIGRKEMNMGQRCSDTRGIVFEDVRVP 259

Query: 298 LLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                NV  G     KI +          A  +V   + +L EA  YA  R   G ++ +
Sbjct: 260 A---ENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYAVERKTFGKLIAE 316

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +A++A+ +  A     R A   D  +  +         A I K +   +A  V
Sbjct: 317 HQAVSFLLAEMAMKVELARLAYQRAAWEIDCGRRNT-------YYASIAKAYAGDIANQV 369

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++A++  GG+G+  +  + +  R++    I  G+     L +  
Sbjct: 370 ASDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIISR 414


>gi|312116097|ref|YP_004013693.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221226|gb|ADP72594.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 382

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 129/378 (34%), Gaps = 25/378 (6%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L    PG   WD+ +  P    +L+ +   G                +           +
Sbjct: 21  LERLAPGAAVWDENKSLPL--DVLKEAGSLGFAAIYAGEEHGGTGLTRLDAALVFEGLSL 78

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                   +S       M+    +      W PK+              K        LT
Sbjct: 79  GCPSIAAFLSIHNMCTWMIDAFGSEEHRARWIPKL-------------AKMDAVASYCLT 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D AA+ +   +  D +       +   + +SD ++++ +  G  G   +  +L 
Sbjct: 126 EPGCGSDAAALRTTAARDGDELVLNGAKAFISGAGLSDLYVVMCRT-GAPGPSGISAVLV 184

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDS 320
           +    GL +   + K+G  +  T  ++F +        L V                L+ 
Sbjct: 185 EKGTPGLSFGANEKKMGWNAQPTAAVQFDDCRVPASNLLGVEGDGFKYAMQGLNGGRLNI 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++   + +L +A++Y+  R   G  L     ++  +AD+ + +  A     + A   
Sbjct: 245 AACALGAAQTALDKALNYSGERKAFGKTLDQFQALQFKLADMEIALQVARCFLRQAAWKL 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+      + A A     + K +    A  V  EA++  GG GY+ +  + +  R+   +
Sbjct: 305 DQ------KTADAAKFCAMAKCFVTDAAFDVADEALQIHGGYGYLADYGLEKIVRDLRVH 358

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+   M +     +
Sbjct: 359 RILEGTNEIMRMITARAM 376


>gi|116328517|ref|YP_798237.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116121261|gb|ABJ79304.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 585

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 79/495 (15%), Positives = 175/495 (35%), Gaps = 66/495 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-P 154
           KV F  +    + +    G+      R    +       ++   + + ++ +    ++  
Sbjct: 95  KVTFPNSMAKGINQVKDAGILPYSIGRKHGGLGIPA--TVQTMMMEVFSRADGSFAIALG 152

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +  A  +    +  + K++ PK+ + E             V   + LTE   G+D+  +
Sbjct: 153 CLNLAETIERFGSKEMVKEYVPKMANGE-------------VFGAMALTEPNYGSDLPNL 199

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
            ++  K  +G++ L+G K F++            + LA+      G   +   L   S  
Sbjct: 200 QTKAVKDENGVWRLTGTKRFITHGCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSS-- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSG 327
            +    ++ K+G   + T E+ + N+ G L+G+           M     L  A  ++  
Sbjct: 258 DVFIAGIEKKMGLHCSPTCEVVYENSPGILIGEEGYGLIRYSMAMMNGARLSIAAQAMGI 317

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +  EA  YA  R   G  + + P ++R ++ +  +IA   A+    + S D    +S
Sbjct: 318 ATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSIDLYHWKS 377

Query: 388 E--------------------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           E                        A +  P++KY+  + A  +  + ++  GG+G+  +
Sbjct: 378 ERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGGAGFTYD 437

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--------SS 479
             I+R YR+    +I  G+    ++  +  +  G +    L    E++          + 
Sbjct: 438 YDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKISVSSLLNE 497

Query: 480 GKKVITILRD---SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536
            K+ +  + +   +I        +A  + +  A       L R            +R   
Sbjct: 498 NKETLEKIVESYSAIENSSTRDEVAFEVVQSTARVLIGFLLERGA----------SRLKG 547

Query: 537 NCHSTHCMLHGRFNA 551
                  +L   +N 
Sbjct: 548 EAKEKKGILAKEYNL 562


>gi|255065462|ref|ZP_05317317.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256]
 gi|255050287|gb|EET45751.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256]
          Length = 589

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 104/511 (20%), Positives = 186/511 (36%), Gaps = 57/511 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGP---GGERWDKVEFHPAWHALLRRSI 111
               E L    +     E AR A+      +  G     G   D +  HP          
Sbjct: 26  LPHAEGLDAETVDAVLDEAARFASEQWADTNRTGDLHGAGFSDDLITTHPDLAHAYDDFC 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G         F               ++  A L    +   ++ +   +    +    
Sbjct: 86  EAGWAGLRAPAEFGGQGLPAVVSAACEEMWCAANLALSLMPMLTLGAVDALFKHGSEEQK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+  T             + L+E + G+D+  I ++     +G Y LSG 
Sbjct: 146 QTYLPKMCSGEWAGT-------------MNLSEPQAGSDLNHIATRAVPKENGAYALSGQ 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    +       ++LA++         V  F+VP+ L +     G  NG+    +
Sbjct: 193 KIFITWGDQEMTENIVHLVLARLPDAAPGVQGVSMFIVPKYLVNADGSLGGRNGVRAIGI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G  ++ T  +EF N  G+L+G        +  M     L+  I   +    +   A
Sbjct: 253 EHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTMMKTARLNVGIEGHAVAERAYQNA 312

Query: 336 IHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATALSFR------LANSFD 381
           + YA+ R              +I  P ++R +      +AA  AL  R       A +  
Sbjct: 313 LAYAKERVQGRDEADGSDDVAIIRHPDVRRMLLIQKATLAAQRALYLRAAALTDFAAACP 372

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   R E       + PI K W       +   A++  GG+GY+EE  +A++ R+     
Sbjct: 373 DNVLRKEAERELDFLIPIVKAWPTDNGVVLTNLAIQIYGGAGYVEESGVAQYLRDVRITP 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTN--LFEQLFST---LEQDLGSSGKKVITILRDSISLCKE 496
           I  G+      D+      G N  L  +L +    L   L +    V   L  +I   + 
Sbjct: 433 IYEGTNGIQAADLAGRKTTGKNGALPLKLLAEGKGLADKLAAVEPAVAQQLAQAIETAE- 491

Query: 497 DKGLARFL--TEKIALASSA--AALYRAGMN 523
            + +AR +   ++ ALAS+A  A L + G+ 
Sbjct: 492 -QSVARMVGYADRPALASAASNAYLQQMGLT 521


>gi|294624408|ref|ZP_06703099.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601292|gb|EFF45338.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 393

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 23  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLSENGLMGIEVPVEYGGA 73

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 74  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 130

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 131 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 180

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 181 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 240

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 241 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 299 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 351

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 352 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 387


>gi|271967671|ref|YP_003341867.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270510846|gb|ACZ89124.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Streptosporangium roseum DSM 43021]
          Length = 385

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 134/377 (35%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G+ +++ EF    + ++R+    GL        +  +                       
Sbjct: 28  GDLYEREEFP---YDIVRQMGAMGLFGLPIPEEYGGMGGDYFALCLVLEELARVDSSVSI 84

Query: 151 LMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +  +V+  A  +    T      W P++ S E                  GLTE  GG+
Sbjct: 85  TVEAAVSLGAMPIYRFGTAEQRATWLPRLTSGEM-------------LGAFGLTEPGGGS 131

Query: 210 DI-AAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLED 264
           D+   + +      D  + ++G K F+++  +D    + +A + G    G   +  +L  
Sbjct: 132 DVPGGMRTTAVLDGDE-WVINGSKAFITNSGTDITGVVGVAAITGERADGKKEISTILVP 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G    +  +K+G   + T EL FS+        L     G  + ++ L    +  A
Sbjct: 191 SGTPGFTVSKKYSKVGWNCSDTRELSFSDCRVPAENLLGERGRGYAQFLQTLDEGRIAIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ Y R R   G  +     ++  IAD+ +    A    +  A    
Sbjct: 251 ALSVGLAQGCVDESLRYVRERRAFGHPIGHYQAIQFKIADMEVRTHTARLAYYHAAEKML 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   +EAA       I K      A     +A +  GG G++ E  + R YR++    
Sbjct: 311 AGEPFKKEAA-------IAKLVAGDAAMDNARDATQIFGGYGFMNEYPVGRFYRDAKILE 363

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 364 IGEGTSEVQRMLIAREL 380


>gi|304392162|ref|ZP_07374104.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130]
 gi|303296391|gb|EFL90749.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130]
          Length = 390

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 142/377 (37%), Gaps = 26/377 (6%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
              P   + DK ++ P    L       GLH       +         H I    +   +
Sbjct: 31  RIAPLAAKIDKEDWFPI--ELWPEMGALGLHGITVPEEWGGAGLGYLEHCIAMEEVSRAS 88

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                   + S    + ++          +  K+ + E+                L ++E
Sbjct: 89  ASVGLSYGAHSNLCVNQLSRWGNEDQKGRYLEKLVTGEH-------------LGALAMSE 135

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  + +K  D         W  ++P ++  I+ A+ +   G   +   L +
Sbjct: 136 PGAGSDVVSMKLRAEKKGDRYVLNGSKFWITNAPQANTLIVYAKTDPDAGPKGITAFLIE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        L    G V+ +   +  + A+++
Sbjct: 196 KEFEGFSIAQKLDKMGMRGSETGELVFQDCEVPEENILGELNGGVKVLMSGLDYERAVLA 255

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+ ++   + Y   R   G  + +  +++  +AD+ + + AA A  + +A + D
Sbjct: 256 AGPIGIMQAAMDIVLPYIHERQQFGKSIGEFQLVQGKVADMYVSMNAARAYVYAVAKACD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++  E+AA A         +  + A  V  +A++ +GG+GYI + +  R  R++    
Sbjct: 316 RGETTREDAAGA-------ILFAAERATQVALDAIQLLGGNGYINDYATGRLLRDAKLYE 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 369 IGAGTSEIRRMLIGREL 385


>gi|229590492|ref|YP_002872611.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229362358|emb|CAY49260.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 382

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 133/381 (34%), Gaps = 36/381 (9%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W   AL+ +    GL   +    +            A         
Sbjct: 27  PYAQAWEKA----GWIDDALVAKMGELGLLGMVVPEEWGGTYVDYVAYALAVEEISAGDG 82

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +     +    +    + W   + S                     LTE 
Sbjct: 83  ATGALMSIHNSVGCGPILNYGSDAQKQTWLADLASG-------------QAIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPDLGKKGISAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    R ++K+G R++ T  +  +         L      +     L  L+   + 
Sbjct: 189 THTPGFVVDRTEHKMGIRASDTCAVTLNQCTVPEANLLGERGKGL--AIALSNLEGGRIG 246

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +       A+ YAR R      +I+   +   +AD+   + AA  L    A  
Sbjct: 247 IAAQALGIARAAFEAALAYARDRVQFNKAIIEHQSVANLLADMQTQLNAARLLILHAARL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K    E       A   K +  +MA  V + AM+  GG GY+E+  + R+YR++  
Sbjct: 307 RSAGKPCLSE-------ASQAKLFASEMAEKVCSSAMQIHGGYGYLEDYPVERYYRDARI 359

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+     + +   L+ 
Sbjct: 360 TQIYEGTSEIQRMVIARELKN 380


>gi|121595129|ref|YP_987025.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|222111471|ref|YP_002553735.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|120607209|gb|ABM42949.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
 gi|221730915|gb|ACM33735.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 596

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 167/420 (39%), Gaps = 53/420 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +     +    G         F      +   I AA + ++        + P +
Sbjct: 71  VTTTPGFKEAFSQFAEGGWQGLQHPADFGGQGLPK--TIGAACVEMLNSANLSFALCPLL 128

Query: 157 TSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL+T  +  +   +  K+ + E+  T             + LTE + G+D+A +
Sbjct: 129 TDGAIEALLTAGSDELKATYLEKLVTGEWTGT-------------MNLTEPQAGSDLALV 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++     DG Y + G K F++    D       ++LA+V G       +  F+VP+ L 
Sbjct: 176 RTKADPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVVPKFLV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M   
Sbjct: 236 NQDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRGLEYMFIMMNA 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDI 366
                 +  ++    +  +A+ YAR R  S            +I  P ++R +  +    
Sbjct: 296 ARYAVGVQGIAVAERAYQKAVQYARDRVQSRPVDGSVAGSAAIIHHPDVRRMLMTMRAYT 355

Query: 367 AAATALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               A++   A      +   +A+ R + A +   M P+ K +  +M+  V +  ++  G
Sbjct: 356 EGCRAMATTAAAAYDAAHHHPDAEVRKQNAVFYEFMVPLVKGYSTEMSLEVASLGVQVHG 415

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           G G+IEE   A++YR++   +I  G+       L        G    + + + +E   G 
Sbjct: 416 GMGFIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEATEGE 475


>gi|47087644|ref|NP_998175.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           2 [Danio rerio]
 gi|28277846|gb|AAH45911.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 131/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 50  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           + +                      +  +      V +       K +  ++        
Sbjct: 101 MGQGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDAQRKKYLGRMT------- 153

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K  D         W  +   ++ + +L
Sbjct: 154 ------EEPLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLL 207

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 208 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 264

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 265 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 325 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 378 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 416


>gi|89069339|ref|ZP_01156698.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
 gi|89045106|gb|EAR51177.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516]
          Length = 386

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 129/345 (37%), Gaps = 29/345 (8%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           +      +   AH +    +   +   A    + S    + +AL  T    + + P + S
Sbjct: 62  EEFGGAGMGYLAHTVAVEEIARASASVALSYGAHSNLCVNQIALNGTDAQKRKYLPDLVS 121

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                         +    L ++E   G+D+  +  + +K  D         W  +   +
Sbjct: 122 G-------------AHVGALAMSEAGAGSDVVGMKLRAEKRGDVYVLNGNKYWITNGGEA 168

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           +  ++ A+ +   G   +   L +    G       +K+G R + TVEL F +       
Sbjct: 169 ETLVVYAKTDPEAGSRGITAFLVEKGFAGFSQSPHFDKLGMRGSNTVELVFEDVEVPA-- 226

Query: 301 DLNVSTGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             NV     + +++L+  LD        +    M   L E + Y R R   G  +    +
Sbjct: 227 -ENVLGAEGKGVRVLMSGLDYERVVLSGIGTGIMAACLDEIMPYLRERRQFGQPIGSFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  IAD+   +  A A  + +A + D  +   ++AA           +  + A  V  +
Sbjct: 286 MQGKIADLYTKLNTARAYVYEVARACDRGQVTRQDAA-------ACVLYASEEAMVVAHQ 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           A++ +GG+G++ E  ++R +R++    I  G+     + +   L 
Sbjct: 339 AVQAMGGAGFMNETPVSRIFRDAKLMEIGAGTSEIRRMLIGRELM 383


>gi|294665598|ref|ZP_06730878.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604647|gb|EFF48018.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 393

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 23  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVEYGGA 73

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 74  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 130

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 131 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 180

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 181 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 240

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 241 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 299 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 351

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 352 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 387


>gi|87198158|ref|YP_495415.1| long-chain acyl-CoA dehydrogenase [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87133839|gb|ABD24581.1| Long-chain acyl-CoA dehydrogenase [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 384

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 130/375 (34%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W      P   ++  ++   G+ C      +  +     +              A
Sbjct: 32  PNAEKWGDDGIVP--KSIWPKAGELGMLCPTVPEEYGGLGLDFGYNAIVDEESSYYGRVA 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A+ +    +    K W PK+ S E             V   + +TE   G
Sbjct: 90  TGFSLQSDIVANYLVSYGSEEQKKKWLPKMVSGE-------------VITAIAMTEPGTG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+  + +  +K  +         +  +   +D  ++  + +  +      V  +L +  
Sbjct: 137 SDLQGMRTTAKKDGNHYVINGSKTYITNGQNADLILVCCKTDTEIQPAWKGVSIVLVEAD 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    R  +KIG     T EL F +    +   L     G +  M  L    L  A+ 
Sbjct: 197 REGFKRGRNLDKIGQDEADTSELFFEDVRVPITNCLGEEGKGFIYLMSELPQERLSIAVG 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +  + +  + + + R R   G  ++D    +  +ADI   +    A      +     
Sbjct: 257 AQASAQKAFDDTVEFTRERKAFGKPILDFQNTRFTLADIKAKLQVGWAHLDWALSRHLRK 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   EE A A       K W  ++   V+ + ++  GG+GY+ E +IAR +R +    I 
Sbjct: 317 ELTPEEGAAA-------KLWHTELQWEVMDKCLQLHGGAGYMNEYAIARAWRGARVTRIF 369

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 370 GGTNEIMKELIGRKL 384


>gi|327309819|ref|YP_004336717.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326955154|gb|AEA28850.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 591

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 99/538 (18%), Positives = 181/538 (33%), Gaps = 65/538 (12%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH-AY 87
           P F  M        L  ++    SV+      +    +    +    +       L+   
Sbjct: 5   PPFRDMRF-----ALHEVLDT-ASVLSSAGIEIDRDTIDGVLEGAGEICARVIAPLNGPG 58

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R D   V     +     R +  G      D                  +   A 
Sbjct: 59  DVQGVRRDDEGVHTPDGFQEAYERYVAGGWPSVDADEHHGGGGLPLVVGSLIKEMLASAN 118

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                  S S      +       + + + P + S  +  T             + LTE 
Sbjct: 119 PSWALYTSLSAGVYRCINANADEELKQAFLPNLASGRWTGT-------------MCLTEP 165

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGCFLVP 259
             GTD+  +T++     DG Y +SG K F++S   D       ++LA+  +   G   + 
Sbjct: 166 HCGTDLGLLTTRAVPRGDGAYRISGTKIFITSGDHDLTDNIVHLVLARTPDAPAGTRGIS 225

Query: 260 RLL----------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                        E G  NG+    L++K+G   +AT  L F +  G L+G+ +     +
Sbjct: 226 LFAVPKRRITDDGEPGPANGVHCDGLESKMGLHGSATCVLRFDDAVGHLVGEESRGLAAM 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M     L + +M++     +   A+ ++R R  S               +IDQP ++R
Sbjct: 286 FVMMNGARLGTGVMALGVAETAGQAALAFSRERLQSRAPGSLHDPAQPADPIIDQPDVRR 345

Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411
            +      +  +    + L+   D  +       R +      ++ P+ K +    A  V
Sbjct: 346 MLLTQQAWVGGSRLFLYWLSLQTDLRREATDLGVRVQADDLLSLLTPVAKAFVSDRAVEV 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLF 469
            + AM+ +GG+GYI +  + +  R++    I  G+       L    ++  G    +QL 
Sbjct: 406 SSLAMQVLGGAGYITDNGVEQSLRDARILPIYEGTNGVQAHDLLARKVIGDGGRRMKQLL 465

Query: 470 STLEQDLGS-SGKKVITILRDSISLCKEDKGLARFL-TEKIALASSAAALYRAGMNDI 525
             + Q     +G   +     ++S   E     R L TE IA A       R G + +
Sbjct: 466 EMVSQFTDRIAGTPELAPFGTALSTLTEQI---RELNTELIAGAEQDEL--RVGTSAV 518


>gi|299536960|ref|ZP_07050265.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298727540|gb|EFI68110.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 397

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 74/387 (19%), Positives = 130/387 (33%), Gaps = 40/387 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD      A   +  R    GL        +        +   A     + + + 
Sbjct: 26  PYIAKWDAEGGFDA--KIWSRLAELGLMGVCVPEQYGGSGMD--YNALAIVCEELERGDT 81

Query: 149 GHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K       GLTE 
Sbjct: 82  AFRTAVSVHTGLNSMTLMQWGTEEQKQRYL-------------VPQAKGVRIGAFGLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+AA+T+   +  +         W     ++D FI+ A  +       +   + + 
Sbjct: 129 GAGSDVAAMTTTAVRDGNHYILNGQKTWISLCDIADHFIVFAYTDKSKKHHGISAFIVER 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
           S  G   + +K K G R+  T EL F +     L   N      E  KI +  LD+   +
Sbjct: 189 SMAGFTSKAIKGKYGIRAGNTGELFFED---LRLPIENRLGEEGEGFKIAMSALDNGRFT 245

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V L +A       Y   R   G  + +  ++ R IA++      +  L +R+   
Sbjct: 246 VAAGAVGLIQACIEASVKYCHERETFGKPIGEHQLVGRMIANMEAGYQMSRLLVYRVGEL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++    + E         + K+  C  A     +A++  G  GY +E  +AR+ R S A
Sbjct: 306 KNKGVRNTRE-------TSLAKWQSCDFANKAADDAVQIHGAYGYSDEYPVARYLRNSKA 358

Query: 440 NSILLGSGNA----MVLDVLNLLEKGT 462
             I  G+           VL   +   
Sbjct: 359 PVIYEGTREIHTIMQADYVLGRRQDKP 385


>gi|183219648|ref|YP_001837644.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909786|ref|YP_001961341.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774462|gb|ABZ92763.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778070|gb|ABZ96368.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 571

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 109/475 (22%), Positives = 191/475 (40%), Gaps = 38/475 (8%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK--------ELELLGEYVLSC 68
            PS   F +++     G N Y  D  L  ++  +               +   GE V   
Sbjct: 8   HPSLQPFDISEYKGLRGKNFYDMDPALQRMVDRYSESFDPKHKLAMVEHIREYGELVGG- 66

Query: 69  TAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              EL    +      ++  Y   G+R D +++        + S   G+    + R +  
Sbjct: 67  ILDELTEECHKEGKYGEVVKYDRTGKRIDFIKYSDEQKRARKISYDHGVVNLDFHREWN- 125

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREY 183
              +  H  R A  YLM     G +  P   +  M+     + T    K + P +  +  
Sbjct: 126 --YEFTHIHRYALTYLMNLNGEGGVACPLAMTDGMILALKKIGTEEQKKKYLPLVAGKGS 183

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           D              G  +TE+ GG++++A  +  +K+ +G + L+G KWF S+P  D +
Sbjct: 184 DSH---------FMAGQYVTERVGGSNVSANRTIAKKLPNGKWELTGEKWFCSNPG-DLW 233

Query: 244 IMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           +  A++EG   VG FLVPR+ E+G  NG    R K+ IG+R   TVE+ +        G 
Sbjct: 234 VTTAKMEGTNTVGMFLVPRIKENGELNGQHILRKKDIIGSRGKITVEIIYDKVEAEEFGR 293

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  +    I    L   + S    R S+ EA  YA+ R   G  +++ P   + +A
Sbjct: 294 PGHGLVNLIRYIIKTSRLHVGLGSCGNARRSVMEASEYAKFRTAYGKKILEFPSFVKTLA 353

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ +   A   ++FR     ++          A I  P+ KY     A  +  +A+  +G
Sbjct: 354 EMQILQTANCFVNFRSVGLAEKGDDA------AEITVPLLKYKSSSQASYITQKAILTLG 407

Query: 421 GSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           G+G I +   + R + +S  N    G+   +    L+ L+K   ++    S LE+
Sbjct: 408 GNGIIGDFSPLPRLHNDSIINETWEGTHLIITDHCLHALQK-PKVYVAFQSLLEE 461


>gi|218289223|ref|ZP_03493458.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240571|gb|EED07751.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 585

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 93/456 (20%), Positives = 166/456 (36%), Gaps = 48/456 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            +  +FH     LLRR+   GL       ++  +   +  K     +  M         +
Sbjct: 53  IEAEDFHRV-VQLLRRAGDLGLLAHSVPEAYGGLGLDKISKGIVGEMVGMTGAYGVAHSN 111

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +   +    +  V +   PK+ S EY                  LTE   G+D  A
Sbjct: 112 HTCIATLPITYFASEAVKRRVLPKMASGEY-------------LGAYCLTEPTAGSDALA 158

Query: 214 ITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +  +   DG  Y +SG K F+++   +D F++ A+++G          L + S  G+ 
Sbjct: 159 AKTVARLSEDGTHYLISGTKQFITNAGFADTFVVYAKIDGEH----FTAFLVERSFPGIS 214

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
               + K+G   ++T ++ F +    +   +G++         +  L   +    +V G 
Sbjct: 215 LGPEEQKMGIHGSSTRQVIFDDCPVPVENVIGEVGRGHAVALGVLNLGRFNLGAGNVGGA 274

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--- 385
           + +L  A  YA  R   G  + + P  +  +A +A  I AA +L +R A   + A +   
Sbjct: 275 KRALGVAARYAAERRQFGRAIAEFPATQAKLASVAARIYAAESLVYRTAAMLEGALAPLY 334

Query: 386 -----RSEEAAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                R +EA          + K    +       EA++  GG GYI E  + R  R++ 
Sbjct: 335 GELPTREKEARLREHAIECAVCKVHGSETLWKAADEAVQIHGGYGYIREYHVERMLRDAR 394

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
              I  G+     L +     +  +   Q  S L   + + GK V              +
Sbjct: 395 IQRIFEGTNEINRLLIPTHFLRRVSRDSQATSRLSAAVDALGKPV--------------E 440

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                +  + A      ALY AG   +AD F   R 
Sbjct: 441 VRGGPMAHERAAIEQMRALYLAGCALVADRF-AGRL 475


>gi|31793896|ref|NP_856389.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium bovis AF2122/97]
 gi|31619490|emb|CAD94928.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium bovis
           AF2122/97]
          Length = 386

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 128/354 (36%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   G         +         +           +         +   A  +  + T 
Sbjct: 52  AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCAGRYSGIGFGLHNDIVAPYLLALATE 111

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P   + E             +   + +TE   G+D+  IT++  K  D  Y L
Sbjct: 112 EQKRRWFPNFCTGE-------------LTTAIAMTEPGTGSDLQGITTRAVKHGDH-YVL 157

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+++ + SD  I++AQ +   G      L+ +    G    R  +KIG  +  T 
Sbjct: 158 NGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTA 217

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F++        L     G +  M+ L    +  AIM+ +GM   L + + YA+ R  
Sbjct: 218 ELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKA 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++A +      +           K  +E+AA A+        + 
Sbjct: 278 FGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKLHLAGKLTAEQAAMAKW-------YA 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    +    ++  GG GY+ E  +AR Y +S   +I  G+   M   +   L
Sbjct: 331 TEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRVQTIYGGTTEIMKEIIGRGL 384


>gi|163734514|ref|ZP_02141953.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392007|gb|EDQ16337.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 382

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 75/361 (20%), Positives = 126/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C      +        H+         A L +      S   A  V 
Sbjct: 43  RETWAQAGELGLLCPSIPEEYGGAGGNFGHEAAILIEAARANLASWGHGIHSGIVAHYVL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P++ S E                 L +TE   G+D+ +I ++  K  +
Sbjct: 103 AYGTEDQKNRWLPQMVSGEM-------------VGALAMTEPSTGSDVQSIKTKAIKDGN 149

Query: 224 GIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGN 281
             Y LSG K F+++       I+ A+ +   G   V  ++ +    +G    R   K+G 
Sbjct: 150 A-YKLSGQKTFITNGQHANLIIVAAKTDPAEGSKGVSLVVVETDGADGFKRGRNLEKVGL 208

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            ++ T EL F          L      G  + M+ L    L  A  +V  +  ++   I 
Sbjct: 209 HASDTSELFFDEVEIPPENILGGAEGQGFYQMMQQLPQERLIIACGAVGAIEGAVERTIT 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  +A+     A A A            +   E+AA A    
Sbjct: 269 YCKEREAFGGPLTQFQNTRFKLAECKTKAAVARAFLDDCMAEHLRGELSVEKAAMA---- 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KYW       V+ E ++  GG G+++E +IA  + ++    I  G+   M   +   
Sbjct: 325 ---KYWITDTQGEVLDECVQLHGGYGFMQEYAIAEMWADARVQRIYGGTNEIMKELIARS 381

Query: 458 L 458
           L
Sbjct: 382 L 382


>gi|221066398|ref|ZP_03542503.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711421|gb|EED66789.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 606

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 85/497 (17%), Positives = 179/497 (36%), Gaps = 66/497 (13%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSIH 112
              E  G        +E A++       L+      P   +   V   P +    ++   
Sbjct: 27  PGFEDAGLETAQAVLEECAKLCEGVVAPLNVPGDINPSSFKDGVVTTTPGFADAFKQYAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRV 170
            G         F      +   I AA + ++        + P +T  ++ AL+T  +  +
Sbjct: 87  GGWQGLQHPADFGGQGLPK--TIGAACIEMLNSANLSFALCPLLTDGAIEALLTAGSDAL 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +  K+ + E+  T             + LTE + G+D+A + ++ +   DG Y + G
Sbjct: 145 KSTYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTRAEPQGDGSYKVFG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+V G       +  F+VP+ L +     G  N +    
Sbjct: 192 TKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVVPKFLVNQDGSLGKRNDVHCVS 251

Query: 275 LKNKIGNRSNATVELEFSN-------------TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           +++K+G +++ T  L+F +               G+L+G+ N     +  M         
Sbjct: 252 IEHKMGIKASPTAVLQFGDGTAASIADSAGPGAVGYLVGEENRGLEYMFIMMNAARYAVG 311

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATAL 372
           +  ++    +   A+ YA+ R  S            +I  P ++R +  +        A+
Sbjct: 312 LQGLAVAERAYQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRMLMTMRASNEGCRAM 371

Query: 373 SFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +   A      +   + + R     +   M P+ K +  +M+  V +  ++  GG G+IE
Sbjct: 372 ATAAAAAYDAAHHHPDVEVRQANQTFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIE 431

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           E   A++YR++   +I  G+      D++                +   +  +   +   
Sbjct: 432 ETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGLTA--KAIAAQIEKTEAALTAS 489

Query: 487 LRDSISLCKEDKGLARF 503
             D+      +   AR 
Sbjct: 490 GTDTAKAVARNLAQARQ 506


>gi|74005675|ref|XP_536053.2| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           precursor [Canis familiaris]
          Length = 441

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 124/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         L  ++   GL           +                +     
Sbjct: 84  VPYHAEWEKAGEVSRELWEKAGKVGLLGVNIAEHHGGIGGDLYSTAIIWEEQAYSNCSGP 143

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    K + P++ S +                 + +TE   G+
Sbjct: 144 GFSLHSDIVMPYITKYGSEEQIKHFIPQMVSGKC-------------IGAIAMTEPGAGS 190

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+    D  I++A            +   L +  
Sbjct: 191 DLQGIKTNAKKDGSD-WILNGSKVFISNGWLCDVVIVVAVTNREAHSLAHGISLFLVENG 249

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 250 MKGFIKGKKLQKMGLKAQDTSELFFEDVRLPASALLGEENRGFYYLMQELPQERLLIAEL 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +SG      E  +Y + R+V G  +     ++  +A++   I    A         D  
Sbjct: 310 GISGSEFMFEETRNYVKERNVFGKKVAHIQTVQHKLAELKTQICVTRAFV-------DSC 362

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E+       A + KYW  ++   +  + ++  GG GY+ +  +A+ Y ++ A  I 
Sbjct: 363 LQLHEKKRLDSTTASMAKYWTSELQNRIAYDCVQLHGGWGYMWDYPVAKAYVDARAQPIY 422

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 423 GGTNEIMKELIARKI 437


>gi|110632385|ref|YP_672593.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110283369|gb|ABG61428.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 598

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 106/545 (19%), Positives = 186/545 (34%), Gaps = 75/545 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGG------ERWD-KVEFHPAWHALLRRS 110
              +   +L     E A++A      +      G       R D  V     + A  R+ 
Sbjct: 30  FSDISPDILEAILDEGAKLAEN---VMQPLNRVGDMEGCTRREDGSVVTPKGFKAAYRQY 86

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP 168
              G         +        + +  A    ++      +M P +T  ++ A+    T 
Sbjct: 87  CEGGWMGLSAPAEYGGQGLP--YLVHTAVGEYLSSANMALMMYPGLTQGAIAAILAHGTD 144

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K + P++    +  T             + LTE   GTD+  + ++      G Y +
Sbjct: 145 EQKKTYLPRMVKGVWTGT-------------MNLTEPHCGTDLGLLRTKAVPNGGGSYRI 191

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEGRV-GCFLVPRLLEDG----------SPNGLCY 272
           SG K F+S+   D       ++LA++EG   G   +   +              PNG+  
Sbjct: 192 SGQKIFISAGEHDMAENIIHLVLARIEGAPEGTKGISLFIVPKLKLDDAGNPAGPNGVSC 251

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             ++ K+G   NAT  + +    GFLLG  N     +  M     L  A+  ++    + 
Sbjct: 252 GSIEEKMGIHGNATCVMNYDEAEGFLLGAENGGLKAMFTMMNEARLGVALQGLAVAEAAY 311

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A +YAR R                  +I  P ++R +  I     A  AL    A   
Sbjct: 312 QNAANYARERLQGRSLSGAKAPDKKADPIIVHPDVRRNLMTIRAFNEAGRALLLWTALQS 371

Query: 381 DEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D A S  +E A      Y  +M P+ K             A +  GG GYIEE+ +++  
Sbjct: 372 DIAHSSEDEQARQLAEDYLALMTPVLKGVLTDKGFEHAVMAQQVFGGHGYIEEQGMSQFV 431

Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL---------EQDLGSSGKKV 483
           R++    I  G+     LD++   L + G    +  F  +         ++ +    K +
Sbjct: 432 RDARIAMIYEGANGIQALDLVGRKLPQDGGRAVQAFFKIVGDFCEEHRSDEKMAPYTKAL 491

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
              L D  +        A    ++   A +AA  Y      +A  F+ +R +    +   
Sbjct: 492 KKGLNDLQAATLWLMQNA---VQRPENAGAAAYDYMHLFGLVALGFMWSRMVRTAQNQLT 548

Query: 544 MLHGR 548
              G 
Sbjct: 549 AGAGG 553


>gi|269836852|ref|YP_003319080.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786115|gb|ACZ38258.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 403

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 134/393 (34%), Gaps = 43/393 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E A+      P +  +   G      E+HP    +L +    G+        +   
Sbjct: 14  DMVREFAQ--REVAPYIQEWDAKG------EYHP---EVLYKMGSLGILGLPIPERYGGG 62

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L  +       +      ++  +    T    + W            
Sbjct: 63  GFDYVSFALACEELEAVDTFLRVVMSVHVGLNSLTLHQWATEEQKQRWL----------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
              P  K       GLTE   G+D   I ++  +  D  Y L+G K ++S +  +D F++
Sbjct: 112 --VPQAKGEKLATFGLTEPGAGSDAGNIQTRAVRDGD-YYILNGEKMWISLANTADHFLV 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A ++       +  L+ +    GL    +K K+G R+  T  + F N    +    N  
Sbjct: 169 FATLDPSKKHHGLIALVVERGMEGLTTGSIKGKLGVRAGDTGWINFQNVRVPV---ENRI 225

Query: 306 TGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               E  KI +          A  +V  +R +   +I Y   R   G  +    ++++ I
Sbjct: 226 GEEGEGFKIAMSAIDQGRFTVAAGAVGLIRAAKEASIKYCHEREAFGEPIGKFQLVQQMI 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++     A+  L  R A   +     + E         + K++ C  A     +A++  
Sbjct: 286 ANMVAGEEASRLLVMRAAELKNRGIRNTRE-------TSLAKWFACDRAFEAANDAIQIH 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           G  GY  E  + R+ R +    I  G+     L
Sbjct: 339 GAYGYSNEYPVERYMRNARGAVIYEGTREIHQL 371


>gi|297160327|gb|ADI10039.1| short/branched chain acyl-CoA dehydrogenase [Streptomyces
           bingchenggensis BCW-1]
          Length = 388

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 142/380 (37%), Gaps = 38/380 (10%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AG 149
           GE W++ EF    + ++R     GL    +   +  +         A           A 
Sbjct: 31  GEFWEQHEFP---YEIIREMGRMGLFGLPFPEEYGGMGGDYFALCLAIEELARVDSSVAV 87

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  +    T    + W P + S E                  GLTE  GG+
Sbjct: 88  TLEAGVSLGAMPIFRYGTEEQKRRWLPGLCSGE-------------SLGAFGLTEPSGGS 134

Query: 210 DIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLED 264
           D  A  +  +     G + ++G K F+++  +D  A I +  V GR   G   +  ++  
Sbjct: 135 DAGATRTTARLDEATGEWVINGTKCFITNSGTDITALITVTAVTGRKPDGSPKISTIIVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               GL      +K+G  ++ T EL FS+        L     G  + ++I   LD   +
Sbjct: 195 SGNPGLTVAAPYSKVGWNASDTRELSFSDCRVPADHLLGEKGRGYAQFLQI---LDEGRI 251

Query: 324 SVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S M   LA     E++ YA+ R   G  +     ++  IAD+ +    A       A+
Sbjct: 252 AISAMATGLAQGCVDESVAYAKTREAFGRPIGANQAIQFKIADMEMRAHMARVAWRDAAS 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +   +E       A I K +  ++A     EA +  GG G++ E  +AR +R+S 
Sbjct: 312 RLVRGEPFKKE-------ASIAKLYSSEVAVTNAREATQVHGGYGFMNEYPVARMWRDSK 364

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 365 ILEIGEGTSEVQRILIARDL 384


>gi|322788010|gb|EFZ13851.1| hypothetical protein SINV_11674 [Solenopsis invicta]
          Length = 636

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 83/413 (20%), Positives = 169/413 (40%), Gaps = 54/413 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++ S  Y                  LTE   G+D ++I S+  K 
Sbjct: 172 ILLFGTPEQKAKYLPQVCSGTY--------------AAFCLTEPSSGSDASSIRSRAVKS 217

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQV   + + G     +   + +    G+    
Sbjct: 218 ADGSHYILNGSKIWISNGGIANIMTVFAQVPMKDPKTGETKDKITAFIVERGFGGVTNGP 277

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G + + T  L F +         NV     E  K+ +  L++    ++      M
Sbjct: 278 PEKKMGIKCSNTAALFFEDVKIPA---ENVLGKEGEGFKVAMNILNNGRFGMAAALTGTM 334

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R  + +A+++A +R   G  L +   ++  +  +++      +L++ ++ + D+  +   
Sbjct: 335 RYCINKAVNHATQRVQFGRTLDNYGTIQEKLGRMSILQYVTESLAYMISGNMDKGSQDYH 394

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG G++ E  + R  R+     I  G+ 
Sbjct: 395 LEAA-------ISKCFASESAWWVCNEAIQTLGGMGFMTETGLERVMRDLRIFPIFEGTN 447

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---L 500
           + + L V    +   G++L   ++ F     +LG   ++       +I L         +
Sbjct: 448 DILRLFVALTGIQYAGSHLKELQKAFKNPTANLGLIVEEATKRATRAIGLKSPPTFGNNV 507

Query: 501 ARFLTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              L E  AL S +         ++L + G   + + F+ NR       T+ M
Sbjct: 508 HPRLAESAALCSKSVEDFGQVIESSLIKYGRGIVDEQFILNRITQAAFDTYTM 560


>gi|194374247|dbj|BAG57019.1| unnamed protein product [Homo sapiens]
          Length = 701

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 155/415 (37%), Gaps = 55/415 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 235 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPS 281

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 282 PCGKYYTLNGSELWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 341

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 342 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 398

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+      
Sbjct: 399 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG----- 453

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 454 -ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 512

Query: 449 AMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL---------- 493
            + L V     ++KG  L   L S L+   G++G    +    LR    L          
Sbjct: 513 ILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLV 571

Query: 494 ---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                    LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 572 HPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 625


>gi|84498080|ref|ZP_00996877.1| FadE19 [Janibacter sp. HTCC2649]
 gi|84381580|gb|EAP97463.1| FadE19 [Janibacter sp. HTCC2649]
          Length = 395

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 73/387 (18%), Positives = 136/387 (35%), Gaps = 31/387 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WDK    PA   L+ +    GL   +    F   +  +      +    + +L  
Sbjct: 25  PHVAQWDKDHHFPA--DLVPKMGDLGLFGLVVPEEFGGSLDPEEGGAFTSLCVAIEELGR 82

Query: 149 GHLMSPSVTSASM------VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                    SA +      +    T    + W P + +                  G GL
Sbjct: 83  VDQSIGITLSAGVGLGINPILTYGTEEQKQRWVPDLVAG-------------RALAGFGL 129

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQV-EGRVGCFLVP 259
           TE   G+D  A  ++  +            +  +S   ++    + A+      G   + 
Sbjct: 130 TEPDAGSDAGATRTKAARDGGEWVVDGAKAFITNSGTDITSVVTVTARTGTDTDGNAQIS 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            ++      G   +   +K+G   + T  L F          L       +    L  LD
Sbjct: 190 AIMIPSGTTGFTVEPAYDKLGWHISDTHGLTFQGVRVPEANLLGEEGQGFKQF--LKTLD 247

Query: 320 SAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +++S + V +A+A+      YA+ R   G  +     +   IAD+A+ + AA  L++
Sbjct: 248 DGRIAISALAVGMAQAMLDLSTDYAKTRTAFGRPIGANQGVSFQIADLAVSVEAARLLTY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   DE ++        +  A I K +  + A      A++  GG+G++EE  +AR Y
Sbjct: 308 KAAWLKDELEAGRRSVKEVKQAASIAKLYSSEAAVTATRIAVQIFGGNGFMEEYPVARFY 367

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           R+     I  G+     + +   L  G
Sbjct: 368 RDGKILEIGEGTSEVQRMLIARHLGLG 394


>gi|295836738|ref|ZP_06823671.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295826183|gb|EDY44542.2| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 390

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 137/376 (36%), Gaps = 35/376 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D  E H   + ++R     GL    +   +  +         A           A  L +
Sbjct: 32  DYYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGLALEELARVDSSVAITLEA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  V L  T    ++W P++ + E             +    GLTE   G+D   
Sbjct: 92  GVSLGAMPVHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGG 138

Query: 214 ITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPN 268
             +          + ++G K F+++  +D    + +  V GR   G   +  ++      
Sbjct: 139 TRTTAVLDEARDEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGSPRISSIIVPSGTP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSG 327
           G       +K+G  ++ T EL F +        L  +  G  + ++I   LD   ++++ 
Sbjct: 199 GFTVAAPYSKVGWNASDTRELSFQDVRVPKANLLGELGRGYAQFLRI---LDEGRVAIAA 255

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA     E++ YA+ RH  G  +     ++  IAD+ L    A       A+    
Sbjct: 256 LATGLAQGCVDESVAYAKERHAFGKPIGANQAIQFKIADMELRAHTARLSWRDAASRLVR 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A       K +   +A     +A +  GG G++ E  +AR +R++    I
Sbjct: 316 GEPFKKEAALA-------KLYSSTVAVDNARDATQVHGGYGFMNEYPVARMWRDAKILEI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 369 GEGTSEVQRMLIAREL 384


>gi|221124737|ref|XP_002160383.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 527

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 149/418 (35%), Gaps = 59/418 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           + L  TP   K + P + S E                   LTE   G+D A+I +  +  
Sbjct: 62  ILLSGTPEQKKKYLPSLASGE-------------KLAAFCLTEPTSGSDAASIRTSAKLS 108

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFL---VPRLLEDGSPNGLCYQR 274
                     G  W  +  +++ F + AQ   +      +   +   + + S  G+    
Sbjct: 109 PDGKHWIMNGGKLWISNGGIAEIFTVFAQTPVKDEKSGEIKNKITAFIVERSFGGVTSGP 168

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-- 331
            + K+G + + T E+ F +        L  V  G    M I   L++    ++       
Sbjct: 169 PEKKMGIKCSNTAEVYFEDVKIPTANVLGEVGGGFKVAMNI---LNNGRFGMAAALSGTQ 225

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +++A+ +A  R   G  +ID  V++  +A +A+      ++++ +    D   +   
Sbjct: 226 RSLISQAVTFAANRTQFGQKIIDYGVIQEKLARMAVRQYVTESMAYMVCGIMDNGFTD-- 283

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                ++ A I+K +  + A  V  E ++ +GG GY++     R  R+     I  G+ +
Sbjct: 284 ----FQLEAAISKIYASESAWEVADETIQILGGMGYMKGSGTERVMRDLRIFRIFEGTND 339

Query: 449 AMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL------- 500
            + L V L  L+      +   + L     + G    T+L+  +   K   G+       
Sbjct: 340 ILRLFVTLTGLQGAGKYLKDFQNKLRNPFANMG----TVLQQGVVRSKRAVGIHSGPDIS 395

Query: 501 ---ARFLTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
               R L  +  LAS A           L +   + +    +  R  D       M+ 
Sbjct: 396 SSVHRDLKNQAELASKAIEAFGITSEKLLIKYKKDVVDQQMVCYRLADAAIDIFGMIS 453


>gi|221121754|ref|XP_002162242.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 626

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 149/418 (35%), Gaps = 59/418 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           + L  TP   K + P + S E                   LTE   G+D A+I +  +  
Sbjct: 161 ILLSGTPEQKKKYLPSLASGE-------------KLAAFCLTEPTSGSDAASIRTSAKLS 207

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFL---VPRLLEDGSPNGLCYQR 274
                     G  W  +  +++ F + AQ   +      +   +   + + S  G+    
Sbjct: 208 PDGKHWIMNGGKLWISNGGIAEIFTVFAQTPVKDEKSGEIKNKITAFIVERSFGGVTSGP 267

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-- 331
            + K+G + + T E+ F +        L  V  G    M I   L++    ++       
Sbjct: 268 PEKKMGIKCSNTAEVYFEDVKIPTANVLGEVGGGFKVAMNI---LNNGRFGMAAALSGTQ 324

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +++A+ +A  R   G  +ID  V++  +A +A+      ++++ +    D   +   
Sbjct: 325 RSLISQAVTFAANRTQFGQKIIDYGVIQEKLARMAVRQYVTESMAYMVCGIMDNGFTD-- 382

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                ++ A I+K +  + A  V  E ++ +GG GY++     R  R+     I  G+ +
Sbjct: 383 ----FQLEAAISKIYASESAWEVADETIQILGGMGYMKGSGTERVMRDLRIFRIFEGTND 438

Query: 449 AMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL------- 500
            + L V L  L+      +   + L     + G    T+L+  +   K   G+       
Sbjct: 439 ILRLFVTLTGLQGAGKYLKDFQNKLRNPFANMG----TVLQQGVVRSKRAVGIHSGPDIS 494

Query: 501 ---ARFLTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
               R L  +  LAS A           L +   + +    +  R  D       M+ 
Sbjct: 495 SSVHRDLKNQAELASKAIEAFGITSEKLLIKYKKDVVDQQMVCYRLADAAIDIFGMIS 552


>gi|294650137|ref|ZP_06727518.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823987|gb|EFF82809.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 382

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 136/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+W++    P   ++      +G  C      +        + +        A
Sbjct: 22  EHIAPHYEQWEREGLMP--RSVWNLLGENGFLCVDVPEEYGGYGVPTHYSLMLVEESARA 79

Query: 145 --QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                +  +   S  +A  +  + T    + W PK+ S E                 +G+
Sbjct: 80  GYCALSTAISCHSEIAAPYIQHIGTEEQKQYWLPKMVSGE-------------AVGAIGM 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ A+ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 127 TEPGAGSDLQAMRTSAILQDDH-YLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLL 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDS 320
           L D   +G       +KIG  S  T EL F N        L N  +G    M+ L    +
Sbjct: 186 LVDTHLDGFKKGTNLDKIGLHSQDTSELFFDNVKVPKDQLLGNAGSGFAYLMQELPRERT 245

Query: 321 AIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           AI   ++  +R ++  A  Y + R   G  +      +  +A   +D  A  A   +   
Sbjct: 246 AIASTALGAIRGAIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVE 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + + K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 306 LYMQGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 358

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 359 IQRIYGGTNEIMKEIVARGL 378


>gi|221632074|ref|YP_002521295.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221155633|gb|ACM04760.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 403

 Score =  250 bits (638), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 125/392 (31%), Gaps = 41/392 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E A+      P +  +   G      E+HP    + RR    GL        +   
Sbjct: 14  DMVREWAQ--REVAPYIREWDAKG------EYHP---EIYRRMGELGLLGLPIPERYGGG 62

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A  +    L  +       +      ++  +    T    + W            
Sbjct: 63  GFDYIALALACEELEAVDTFLRVAISVHVGLNSLTLLQWGTEEQKQRWL----------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P  +        LTE   G+D   I ++  +  D         W   +  +D F++ 
Sbjct: 112 --VPQARGEKLATFALTEPGAGSDAGHIQTRAVRDGDSYILNGEKMWISLANTADHFLVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A ++  +G   +   + +    GL    +  K+G R+  T  +   N         N+  
Sbjct: 170 ATLDPALGHRGLCAFMVERGMPGLTTGSIHGKLGVRAGDTGWISLQNVRVPA---ENMIG 226

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P E  KI +          A  +   +R  L  ++ Y   R   G  +    ++++ IA
Sbjct: 227 EPGEGFKIAMSAIDQGRFTVAAGACGLIRACLEASVKYCHERQAFGQEIGRFQLVQQMIA 286

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +      +  L FR A   +     + E + A+  A       C  A     +A++  G
Sbjct: 287 KMVRGYETSRLLVFRAAELKNRGIRNTRETSLAKWHA-------CDCAFEAANDAVQIHG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             GY  E  + R++R S    I  G+     L
Sbjct: 340 AYGYSSEYPVERYFRNSRGAVIYEGTREIHTL 371


>gi|312960846|ref|ZP_07775351.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311284504|gb|EFQ63080.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 383

 Score =  249 bits (637), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 134/380 (35%), Gaps = 36/380 (9%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W   AL+ +    GL   +    +            A         
Sbjct: 27  PHAQAWEKA----GWIDDALVAKMGELGLLGMVVPEEWGGTYVDYVAYALAVEEISAGDG 82

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +     +    TP   + W   + S                     LTE 
Sbjct: 83  ATGALMSIHNSVGCGPILNYGTPEQKQTWLADLASG-------------QAIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ + + DG + ++G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGKRAKLAIVFAVTDPALGKKGISAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    R ++K+G R++ T  +  +         L      +     L  L+   + 
Sbjct: 189 TDTAGFVVDRTEHKMGIRASDTCAVTLNQCTVPEANLLGERGKGL--AIALSNLEGGRIG 246

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   + +       A+ YAR R      +I+   +   +AD+   + AA  L    A  
Sbjct: 247 IAAQALGIARAAFEAALAYARDRVQFDKAIIEHQSVANLLADMQTRLNAARLLILHAARL 306

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K    E       A   K +  +MA  V + AM+  GG GY+E+  + R+YR++  
Sbjct: 307 RSAGKPCLSE-------ASQAKLFASEMAEKVCSSAMQIHGGYGYLEDYPVERYYRDARI 359

Query: 440 NSILLGSGNAMVLDVLNLLE 459
             I  G+     + +   L+
Sbjct: 360 TQIYEGTSEIQRMVIARELK 379


>gi|120436729|ref|YP_862415.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117578879|emb|CAL67348.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 388

 Score =  249 bits (637), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 147/384 (38%), Gaps = 32/384 (8%)

Query: 98  EFHPAWHALLRRSIHDGL------HCSIWDR-------------SFEPVVRKQAHKIRAA 138
            +    H L R+S  + L      H   W+                      Q  +    
Sbjct: 3   RYFTEEHDLFRKSFQEFLQKEVVPHIEKWEETGTIERFIWKKFGEMGYFGLNQPEEYGGM 62

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            L L   +     +    +     A+     +           +       P        
Sbjct: 63  GLDLFYTVIFLEELQKVNSGGFAAAMWAHAYLAMTHLKVEADHDLKEKYLTPAIDGDKIG 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
            L ++E  GG+D+A + +   K  D  Y ++G K F+++ + +D +++ A+     G   
Sbjct: 123 CLCISEPFGGSDVAGMKTTAVKKGD-KYIINGSKTFITNGVYADFYVVAAKTAPEKGNKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314
           +   L D    G+   +L NK+G R++ T EL F N      +LLG+       +     
Sbjct: 182 MSMFLVDKEVKGISATKL-NKLGWRASDTAELAFDNVEIPEEYLLGEEGKGFNYIMQHFA 240

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  L   I + +    +L  A+ Y + R   G  L    V++ ++A++  ++      ++
Sbjct: 241 MERLIMGINAHARSEFALDYAMGYMKEREAFGKTLDKFQVLRHSLAEMVSEVEVIKEFNY 300

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   ++     +EA+ ++++A        K+A  V+ + ++ +GG GY+E+  +AR  
Sbjct: 301 ATAQRLNDGDYVVKEASMSKLLA-------TKIADEVMYKCLQMLGGYGYMEDYPMARLL 353

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+S    I  G+   +   +  ++
Sbjct: 354 RDSRLGPIGGGTSEILKEIIAKMV 377


>gi|304394048|ref|ZP_07375971.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303293488|gb|EFL87865.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 602

 Score =  249 bits (637), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 92/516 (17%), Positives = 177/516 (34%), Gaps = 69/516 (13%)

Query: 64  YVLSCTAQELARM-ANYNTPQLHAYGPGGERWDK-------VEFHPAWHALLRRSIHDGL 115
            +L     E  +M A    P        G  W +       V+    +          G 
Sbjct: 36  DMLEAILGEAGKMSAEVLQPLNEVGDKEGCVWTEGDGFDNTVKTPTGFKEAYDLYSESGW 95

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               +   +                   A +  G     +  +A+ +    +    + + 
Sbjct: 96  GALPFPEEYGGQGLPATLNAVVQEYVSSANMAFGMYPGLTAGAAAALVEHASEEQKQAYV 155

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE   GTD+  + ++  +  DG + ++G K ++
Sbjct: 156 PKMLSGEWSGT-------------MNLTEPHCGTDLGMLRTKAARNDDGSFAITGQKIWI 202

Query: 236 SSPMSDA-----FIMLAQVEGRV-GCFLVPRLL-------EDGSP---NGLCYQRLKNKI 279
           S+   D       +++A++EG   G   +   +       EDG+P   N L    L++K+
Sbjct: 203 SAGEHDMSSNIIHLVIARIEGEPEGTKGISLFVCPKYILDEDGNPGERNKLSCGSLEHKM 262

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   NAT  + +     FL+G+ N     +  M     L  A+  ++   V+   A  +A
Sbjct: 263 GINGNATCVMNYEGAKAFLVGEENKGLAAMFVMMNEARLGVAVQGLAQSEVAYQNAADWA 322

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA------NSFD 381
           R R                  +I  P ++R +  I     AA AL    A      +  D
Sbjct: 323 RDRVQGRALTGAKYPDQKADPIIVHPDIRRVLLTIRSFNEAARALVLWTALKGDLSHRSD 382

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   +        ++ P+ K             A +  GG+GY +++ + +  R++    
Sbjct: 383 DEDEKQNADDIMGLLTPVLKGVLTDKGFDNTVMAQQVFGGTGYTKDQGVEQFVRDARIAM 442

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL-----EQDLGSSGKKVITILRDSISLC 494
           I  G+     LD++   L  KG    +  F  +     E     + K  +  L  ++   
Sbjct: 443 IYEGANGIQALDLVGRKLPSKGGRAVQAYFKEVGKLCSEHKDDEAMKPYVEPLSKALGDL 502

Query: 495 KEDKGLARFLTE-KIA---LASSAAALYRAGMNDIA 526
              +    +L +  +A    A +A+  Y      +A
Sbjct: 503 ---QAATMWLVQNGMANPNNAGAASTDYMHLFGLVA 535


>gi|113931598|ref|NP_001039250.1| long-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89273381|emb|CAJ81317.1| acyl-Coenzyme A dehydrogenase, long chain [Xenopus (Silurana)
           tropicalis]
          Length = 444

 Score =  249 bits (637), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 126/377 (33%), Gaps = 34/377 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         L  ++   GL  +        +              +       
Sbjct: 87  VPYHAEWEKAGQVSRNLWEKAGQQGLLGTSTPEEHGGIGGDILSSAIVWEEQMYVNCTGP 146

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      ++   +    + + P++ + +                 + +TE   G+
Sbjct: 147 GFSLHSDIVMPYISRYGSKSQVEKYIPQMTAGKC-------------IGAIAMTEPGAGS 193

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++  MSD  I++A    E R     +   L D  
Sbjct: 194 DLQGVRTNAKKDGSD-WILNGSKVFITNGWMSDVVIVVAVTNREARTPAHGISLFLVDNG 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG ++  T EL F +       LLG  N     +        L  A M
Sbjct: 253 TKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQENKGFYYLMAELPQERLLIADM 312

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++       E  +Y ++R   G  +     ++  +A++   I              D  
Sbjct: 313 ALASCEFMFEETRNYVKQRKAFGKTIAHLQTVQHKLAELKTQICIGRTF-------LDNC 365

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E       A + KYW   +  +V  + ++  GG GY+ E  IA+ Y +S    I 
Sbjct: 366 LQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIY 425

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   M   +   + K
Sbjct: 426 GGTNEIMKELIARDIVK 442


>gi|313836486|gb|EFS74200.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA2]
 gi|314928941|gb|EFS92772.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL044PA1]
 gi|314971068|gb|EFT15166.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA3]
 gi|328906611|gb|EGG26386.1| acyl-CoA dehydrogenase [Propionibacterium sp. P08]
          Length = 387

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 133/373 (35%), Gaps = 28/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+              +  G         +      +                +
Sbjct: 31  PNAAEVDEKGVFA--QQQYDSLVEAGFAAPGIPERYGGDGSDEIAAAIIMEEVARVCASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +   A  +    +      +  ++ S                  G  L+E   G
Sbjct: 89  STVISSNELGAVPLLKYGSEEQRSRYLSEVASG-------------KALFGYALSEADAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 136 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPSDSRHRISALMVHADDP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F +T       +      +     L  LD++ +S++  
Sbjct: 196 GISYGAPEHKMGIRGSVTREVIFKDTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 253

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 254 AVGIAQGALDTATDYVQKRRQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A +V  +A++ +GG GY +E ++ R +R++    I 
Sbjct: 311 GRQTDDVSY---FGAAAKCFASDTAMSVCTDAVQLLGGIGYSKESAVERMFRDAKVTQIY 367

Query: 444 LGSGNAMVLDVLN 456
            G+     + +  
Sbjct: 368 EGTNQIQRIVIAR 380


>gi|296171793|ref|ZP_06852921.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295893964|gb|EFG73731.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 386

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 129/354 (36%), Gaps = 26/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +   G         +         +           +         +   A  +  + T 
Sbjct: 52  AGKQGFLGMAVPEEYGGGGNPDFRYNTIITEETTFGRYSGIGFGLHNDIVAPYLLALATE 111

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W PK  + E             +   + +TE   G+D+  I ++  K  D  Y L
Sbjct: 112 EQKQRWLPKFCTGE-------------IITAIAMTEPGTGSDLQGIKTRAVKQGDH-YVL 157

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+++ + +D  I++AQ +   G      L+ +    G    R  +KIG  +  T 
Sbjct: 158 NGAKTFITNGINADLVIVVAQTDPDKGAQGFSLLVVERGMEGFERGRHLDKIGLDAQDTA 217

Query: 288 ELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F++        L     G +  M+ L    +  AIM+ + M   LA+ + Y + R  
Sbjct: 218 ELSFTDVKVPAENLLGQEGMGFIYLMQNLPQERISIAIMAAAAMEQVLADTLQYTKERKA 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++A +      +         + +  +E+AA A+        + 
Sbjct: 278 FGKPIGSFQNSRFVLAELATEATVVRIMVDEFIRLHLDKQLTAEQAAMAKW-------YS 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    +I   ++  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 331 TEKQVHLIDRCLQLHGGYGYMREYPVARAYLDARVQTIYGGTTEIMKEIIGRSL 384


>gi|332306487|ref|YP_004434338.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173816|gb|AEE23070.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 601

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 87/518 (16%), Positives = 177/518 (34%), Gaps = 67/518 (12%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P    +   GER   V   P            GL    +D     +   +   
Sbjct: 58  RKADLNEP---TFD--GER---VHMIPEVKEAFDTYAESGLIAGRFDFEDGGMQLPETIM 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +  +  +  +   +      +V +A+++       +   + P++ + E+  T        
Sbjct: 110 MACSSYFTSSNPSSTGYSFLTVAAANVIKNFACQSIKDKFMPRMLTGEFTGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ +A IT+  +   DG Y + G K F S+   +       ++LA++
Sbjct: 162 -----MALTEPHAGSSLADITTNAKPAGDGSYRIKGSKMFTSAGDHELSDNIVHLVLAKI 216

Query: 250 EGRV-GCFLVPRLLEDG----------SPNGLCYQRLKNKIGNRSNATVELEF---SNTF 295
           +G   G   +   +               N +    L +K+G R   +  L F    +  
Sbjct: 217 QGAPPGVKGISLFVVPKYRLDENDQPSQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCH 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------- 346
           G+L+G+ +     +  M     L     +          ++ YA+ R             
Sbjct: 277 GYLVGEEHQGLKYMFLMMNEARLGVGFGAAMLGYAGYRHSLQYAKERTQGRVAPNNKPTD 336

Query: 347 --GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I    +KR +      +    +L F  A   D+       + + + A    ++ P
Sbjct: 337 KPATIIQHGDVKRMLLAQKSYVEGGMSLCFYAARLVDDLHTAATPEEKQKTAELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           + K W  +  P     A++ +GGSGY  E  + + +R++  N I  G+     LD++   
Sbjct: 397 VVKAWPSEFGPKANDLAIQILGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLMTRK 456

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL-RDSISLCKEDKGLARFLTEKI------A 509
           L +        L   +  D   +   V   L  D      + + L   +  ++      A
Sbjct: 457 LWQANGAGLVALQKAMSDDFAKAQHSVSQQLIADLQPYLGKLQTLIPLIGSELRGENQNA 516

Query: 510 LASSAAALYR-AGMNDIADVFLENRFLDNCHSTHCMLH 546
           L ++A+      G   ++ +++              L 
Sbjct: 517 LLANASCFLTIFGQIVVSWIWIRQAITAEAALAKGQLP 554


>gi|302864586|ref|YP_003833223.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315500879|ref|YP_004079766.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302567445|gb|ADL43647.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315407498|gb|ADU05615.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 382

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 124/370 (33%), Gaps = 29/370 (7%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSP 154
           +    P  + ++R+    GL    +      +         A           A  L + 
Sbjct: 33  EQHTFP--YEIVRQMGKMGLFGLPFAEEHGGMGGDYFALCLALEELARVDSSVAITLEAA 90

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A  +    T      W PK+ S E                G GLTE   G+D    
Sbjct: 91  VSLGAMPIYRFGTEEQKAQWLPKLLSGE-------------ALAGFGLTEPGTGSDAGGT 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLC 271
            ++     D         +  +S   ++    + A    R  G   +  ++      G  
Sbjct: 138 RTRAVLDGDEWVINGSKAFITNSGTDITALVTVTAVTGTRPDGGKELSTIIVPSGTPGFT 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
                +K+G  ++ T EL F +        L     G  + ++IL    +  A ++V   
Sbjct: 198 VAPGYSKVGWNASDTHELTFDDCRVPAANLLGERGRGFAQFLRILDEGRIAIAALAVGLA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  + E+I YA+ R   G  + +   ++  IAD+ +    A    +  A      +    
Sbjct: 258 QGCVDESIKYAKERQAFGQPIGNYQAIQFKIADMEMKAHTARLAYYDAAARMLAGEPFKR 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA A++ A          A     EA +  GG G++ E  +AR +R+S    I  G+  
Sbjct: 318 QAAIAKLHASTV-------AVDNAREATQIHGGYGFMNEYPVARFWRDSKILEIGEGTSE 370

Query: 449 AMVLDVLNLL 458
              + +   L
Sbjct: 371 VQRMIIARDL 380


>gi|196003972|ref|XP_002111853.1| hypothetical protein TRIADDRAFT_23854 [Trichoplax adhaerens]
 gi|190585752|gb|EDV25820.1| hypothetical protein TRIADDRAFT_23854 [Trichoplax adhaerens]
          Length = 604

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 90/464 (19%), Positives = 174/464 (37%), Gaps = 54/464 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G    +  + +  +  K+    R   +        +  L          + L    + 
Sbjct: 88  ELGALGMLAPQEYGGMQLKRTQYARITEIIGSFDASISVFLGGHQAIGYKGIVLFGNEQQ 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
            + + P + + E                   LTE   G+D  +I S+     DG  Y L+
Sbjct: 148 KQKYLPSLVTGE-------------KIAAFCLTEPSAGSDANSILSKAVLDDDGKHYILN 194

Query: 230 GHKWFLSSP-MSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+  ++D   + AQV     +       V   + +    G+     + K+G RS
Sbjct: 195 GSKIWISNGGIADVMTVFAQVPFKKDDSDQQSQAVTAFIVERDFGGVTSGPPEKKMGVRS 254

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSL-----AEAIH 337
           + T  + F N    +    NV     E  K+ ++ L+    ++            A+ I 
Sbjct: 255 SNTAAVYFDNVKIPV---ENVIGKVGEGFKVAMHILNEGRYAMGAAMTGAMRMFTAKTIE 311

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  LI    ++  IA + L   A  ++++ ++N+ D   K    EAA     
Sbjct: 312 HANNRVQFGQHLIQYQSIQEKIAQMGLSHYAVESVTYAVSNNMDRGIKEFQVEAA----- 366

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-L 455
             I+K +  + A  V  E ++ + G G++ E  + R  R+     I  G+ + + L + L
Sbjct: 367 --ISKIFGSESAWNVCDECIQILAGMGFMRENQVERFMRDIRICRIFEGTNDILRLFIAL 424

Query: 456 NLLEKGTNLFEQLFSTLEQ---------DLGSSGKKVITILRDSISLCK----EDKGLAR 502
           N ++      ++L   L+Q         D G    K +  + DS +L +    E    A+
Sbjct: 425 NGIQYAGKNMKELQKALQQPISNLGTLWDQGVKRSKRLIGIADSQALLEVTAPELSDCAK 484

Query: 503 FLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +T+++    +     L + G + I   F+ NR  +     + M
Sbjct: 485 MITQRVEEFGATIEKLLLKHGRDIIDQQFILNRIANATIDIYSM 528


>gi|108797162|ref|YP_637359.1| butyryl-CoA dehydrogenase [Mycobacterium sp. MCS]
 gi|119866247|ref|YP_936199.1| butyryl-CoA dehydrogenase [Mycobacterium sp. KMS]
 gi|108767581|gb|ABG06303.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. MCS]
 gi|119692336|gb|ABL89409.1| Butyryl-CoA dehydrogenase [Mycobacterium sp. KMS]
          Length = 385

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 133/368 (36%), Gaps = 30/368 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+  AW   ++R    G++      S+       A  +   +      +     M     
Sbjct: 35  EYPEAWIEQMKR---IGIYGLAIPESYGGSPVSTACYVEVTQELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++ L  T    + + P + + E   T             + LTE  GG+D+  +T+ 
Sbjct: 92  VAKLLTLFGTEEQKRTYLPGMATGEIRAT-------------MALTEPGGGSDLQNMTTT 138

Query: 218 GQK-ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQR 274
                 DG+       W  ++  S    +L + +         +  +L +    GL   R
Sbjct: 139 ALPCEGDGLAVNGSKTWISNARRSGLIALLCKTDPSATPRHKGISVVLVEQGTTGLSVSR 198

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRV 330
              K+G +   + EL F +        L      G  + MK L    +  A  ++     
Sbjct: 199 DLPKLGYKGVESCELVFDDCRVPATAILGGEPGRGFAQMMKGLETGRIQVASRALGVATA 258

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA
Sbjct: 259 ALEDALRYAQERESFGQPIWKHQSIGNYLADMATKLTAARQLTRYAAERYDSGERADMEA 318

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+    
Sbjct: 319 GMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQ 371

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 372 RNVIAAQL 379


>gi|315182691|gb|ADT89604.1| hypothetical acyl-CoA dehydrogenase [Vibrio furnissii NCTC 11218]
          Length = 389

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 133/387 (34%), Gaps = 32/387 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLM 143
               P   + D     P    L       GL     D +     +   AH +    +   
Sbjct: 29  EHIAPLAAQIDHDNQFPVH--LWPLFGDMGLLGVTVDEACGGAEMGYLAHVLAMEEISRA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +      +  + + PK+    +                L ++
Sbjct: 87  SASVGLSYGAHSNLCVNQLFRNGNAKQRETYLPKLLDGSW-------------VGALAMS 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+ ++  + ++  D         W  + P +   I+ A+ +       +   + 
Sbjct: 134 EPNAGSDVVSMQLKAERRGDHFVLNGSKMWITNGPDAQVVIVYAKTDPNAKSRGITAFIV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           +    G    +  +K+G R + T EL F N        L      +E +        +  
Sbjct: 194 ERDFPGFYSAQKLDKLGMRGSNTCELVFENCPVPAENILGELNQGIEVLMSGLDYERVVL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +  M+  L   + Y   R   G  + +  +++  +AD+   + AA A  + +AN+ 
Sbjct: 254 AAGPLGIMQACLDLVLPYVHDRKQFGHAIGEFQLVQAKVADMYTRLNAARAYVYAVANAC 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   +++A           +  ++A  +  +A++ +GG+GYI E    R  R++   
Sbjct: 314 DRGEVTRKDSAG-------VILYAAELATQMALDAIQLLGGNGYINEFPAGRLLRDAKLY 366

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            I  G+           +  G  LFE+
Sbjct: 367 EIGAGTSEI------RRILIGRELFEE 387


>gi|167644418|ref|YP_001682081.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346848|gb|ABZ69583.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 380

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 148/414 (35%), Gaps = 43/414 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + +EL L  + +      E A  A   + Q        +R D+     AW      + 
Sbjct: 3   PWIDEELTLFQDSISRFLQAEFAPHAERWSQQ--------QRVDR----EAWLK----AG 46

Query: 112 HDGLHCSIWDRSFEPVVRK---QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
             G+ C     ++         +A  ++A     +           S   A  +    T 
Sbjct: 47  QAGMLCVSIPETYGGAGGHYGHEAIVVQALARAGLGGGFGAGNSVSSAVVAHYILAYGTE 106

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                W P++   E+                + +TE   G+D+  I+++ + +  G    
Sbjct: 107 AQKLAWLPRMARGEW-------------IGAVAMTEPGAGSDLQRISTRAEPVEGGFRVT 153

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATV 287
               +  +   +D  +++ + +   G   +  L+ E     G    R   KIG  +  T 
Sbjct: 154 GQKTFITNGQNADLIVIVCKTDPAAGGKGISLLVLETEGAEGFTRGRNLKKIGMHAQDTS 213

Query: 288 ELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F +TF      L V   G V+ M+ L    +  A+ +V+ M  +L   I Y + R  
Sbjct: 214 ELFFQDTFIPKSHVLGVLGGGFVQLMQQLAWERMVIALDAVACMERALEVTIDYVKSRTA 273

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +ID    +  +A+     + A      L       +   E AA A       K W 
Sbjct: 274 FGKQVIDYQNTQFKLAECKTAASVARIFVDELMVRLIAGELSPETAAMA-------KLWT 326

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    VI + ++  GG GY+EE  IAR Y ++ A  I  G+   M + +   L
Sbjct: 327 TETQAKVIDDCLQLHGGYGYMEEYPIARLYADARATRIYGGTNEIMKMIIARTL 380


>gi|254494930|ref|ZP_01052594.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|213690512|gb|EAQ42022.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 388

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 130/302 (43%), Gaps = 13/302 (4%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
             A+     +      K  +++       P  +      L +TE  GG+D+A + S   K
Sbjct: 86  AAAMWAHEYLAMTHLNKEGNQQQKEKYLVPSVEGDKIGCLCITEPFGGSDVAGMRSTAVK 145

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             +  Y L+G K F+++ + SD  I+ A+ +       +   + D    G+   +L +K+
Sbjct: 146 QGN-KYILNGSKTFITNGVYSDYLIVAAKTDPSDKYKGISIFVVDRDSKGISATKL-DKL 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R++ T E+ F N       L+G+  +    +     L  L   + + +    ++  A+
Sbjct: 204 GWRASDTGEIAFDNVEIPAENLMGEEGLGFPYIMQHFALERLIMGVNAHARAEFAVDYAM 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  L     ++  +A++A  +      ++ +    D+     +EA+ ++++
Sbjct: 264 QYMQERIAFGKSLDKFQALRHKVAEMASKVDMCREYNYSITKRLDQGTYVVKEASMSKLL 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    K+A  VI +A++ +GG GY+EE  +AR  R+S    I  G+   +   +  
Sbjct: 324 -------STKIADEVIYDALQLLGGYGYMEEYPMARLLRDSRLGPIGGGTSEILKEIIAK 376

Query: 457 LL 458
           ++
Sbjct: 377 MV 378


>gi|224370913|ref|YP_002605077.1| Acd11 [Desulfobacterium autotrophicum HRM2]
 gi|223693630|gb|ACN16913.1| Acd11 [Desulfobacterium autotrophicum HRM2]
          Length = 405

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 137/377 (36%), Gaps = 28/377 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + WD+  + P +   +      G + ++    +        A  I    +   
Sbjct: 40  KKITPNADAWDEANYFP-YKEAVLPMGELGFYGTVIPEEYGGEDMGWMAAMIVTEEIAKG 98

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +      +    +  A  +    T    K +  K+ + EY               G G+T
Sbjct: 99  SSSLRVQVNMQVLGCAYGIFKYGTEAAKKRYVEKLCTAEY-------------LGGFGIT 145

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-L 262
           E   G+D+ A+ +  +   D         W  ++ ++D  I  A  +  +G   +    +
Sbjct: 146 EADAGSDVMAMATTAEDKGDHYLLNGSKTWISNAAIADVLICYAYTDKSIGTKGLSAFVI 205

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLD 319
           E  +  G+    L+ K+G+ S+ T E+   N        L         +        L 
Sbjct: 206 EPKNFPGISTSALE-KLGSHSSPTGEVFLDNVKVPKENLLGKSGDGAKILFGSLNHTRLS 264

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A   V   +  L EAI Y   R   G  +    + +  IA +A +I AA  + +R A  
Sbjct: 265 AAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAARFMVYRAAFE 324

Query: 380 FDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            D+   +   + A A+ +A        ++A      AM  +G  GY  E  +AR YR++P
Sbjct: 325 KDQGNINNGLDVAKAKYLAG-------EVATKASNFAMRILGAYGYSTEYPVARFYRDAP 377

Query: 439 ANSILLGSGNAMVLDVL 455
             S++ GS N   + + 
Sbjct: 378 TYSMVEGSANICKMIIA 394


>gi|158521318|ref|YP_001529188.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510144|gb|ABW67111.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 604

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 189/502 (37%), Gaps = 71/502 (14%)

Query: 82  PQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P L      G ++D   V    ++  L +  +       +                 A  
Sbjct: 55  PSLAESDEIGVKFDSGTVTVPESFVPLRKLILEGEWQNLMVPPEMGGQGAPPFVSAAATE 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            ++ A        S   ++A M+    T    K + P + S ++  T             
Sbjct: 115 YFMAANWPLFTYASLGCSTAGMIQHHGTEEQKKKYIPNLVSGKWGGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + LTE + GTD+ AI +   K  DG Y L+G+K F+++   +        +LA++EG   
Sbjct: 162 MLLTEPQAGTDVGAIETSAVKNPDGTYSLTGNKIFITNGEQNLTENIIHPVLARIEGHDP 221

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ + +     G  N +     + K+G  ++AT  +   +     GFLLG
Sbjct: 222 GTKGISIFIVPKFMVNDDGSLGERNDIVCTGTEEKMGIHASATCSMSLGSKGKCVGFLLG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGI 348
           +       + +M     + + + + +    +   A++YAR R  S            G  
Sbjct: 282 EEKQGMKIMFEMMNEARMATGLQAFAYASAAYLIAVNYARERIQSRDIMDYKNPAAPGVP 341

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRL------ANSFDEAKSRSEEAAYARIMAPITKY 402
           +I  P ++R +  +   +    +  +        A   ++   R   +    ++ P+ K 
Sbjct: 342 IIKHPDVRRNLLWMKSIVDGMRSFFYYTGVAGTKAEIVEDETERRRNSGLFELLTPLIKE 401

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEK 460
           +       V  +AM+ +GGSGYI+E  + ++ R+    +I  G      +D+L   L   
Sbjct: 402 YLSFRGHEVCVQAMQVLGGSGYIKEYLVEQYTRDCKITTIYEGCSGVQAMDLLGRKLPMG 461

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE------------KI 508
           G  +F      +++ +     +    +  + ++ ++ + +A  + E            K+
Sbjct: 462 GGKVFGSFMDEIKKTV-----EAAKQIDATSAMAQQMEKVANRMAEVAMHLGVTAMEGKL 516

Query: 509 ALASSAAALYRAGMNDIADVFL 530
             A + +  +   M D+   ++
Sbjct: 517 REAFAHSLPFLHAMGDVIMAWM 538


>gi|302345814|ref|YP_003814167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149404|gb|ADK95666.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 558

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 159/433 (36%), Gaps = 44/433 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++ +   GL      R +  +          + L   A     ++ S        +  
Sbjct: 74  ENIQATRQAGLWGVSMPRRYGGLNLPNVVFSMMSELIAAADAGFQNIWSLQSC-IDTLYE 132

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
                  + + P+I   E                 + LTE   G+D+  +  +      +
Sbjct: 133 FGNEEQRQKYIPRICEGEMM--------------SMDLTEPDAGSDLQRVMLKATFDEKE 178

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G  
Sbjct: 179 NCWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRNGGVDVRHIEHKLGIH 238

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G++ +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 239 GSPTCELVYKNAKAELCGNVRMGLIKYVMALMNGARLGIAAQSVGLEQEAYNEGLAYAKD 298

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA----------- 390
           R   G  +++ P +   ++ +   + A  +L ++ A   D  K+  + A           
Sbjct: 299 RAQFGKKIVNFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIARDQKLTPEERQ 358

Query: 391 ------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +++   GGSG+I E    R YR++   SI  
Sbjct: 359 EMKKYTRLADAFTPLAKGINSEYANQTAYDSISIHGGSGFIMEYKCQRLYRDARIFSIYE 418

Query: 445 GSGNAMVLDVLNLLEKGTNLF---EQLFSTLEQDLGSSGKKVITIL----RDSISL--CK 495
           G+    V+  +  +  GT L    E L   L  D     ++ +  L     +++      
Sbjct: 419 GTTQLQVVAAVRYITNGTYLSIMKEMLEGELSCDCMKGLRERVAKLVQLYEEAVEKVNAS 478

Query: 496 EDKGLARFLTEKI 508
           E++ +  FL  ++
Sbjct: 479 ENQDVHDFLARRL 491


>gi|187918900|ref|YP_001887931.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717338|gb|ACD18561.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 381

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 129/370 (34%), Gaps = 25/370 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E  D+ E  PA   +  +    GL       +F                           
Sbjct: 27  EELDRDERFPA--EIYTQMGELGLFGITVPEAFGGAGLDVTAYALVMEELSRGYASVADQ 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                   +++++  T      +               P+ +  +     +TE   GTD+
Sbjct: 85  CGLLELVGTLLSVHGTDSQRAKYM-------------QPLLRAKLRPAYCITEADAGTDV 131

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           + I +   +  DG        W  ++P++D   +LA+ +   G   +   + D +  G+ 
Sbjct: 132 SGIRTTAMRTPDGWELSGAKLWIHNAPVADVAFVLARTDPAAGRRGMSIFIVDCALAGVS 191

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
               ++K+G R++   EL F         LLG        +  +     +  A ++V   
Sbjct: 192 KGAKEHKMGQRASQVGELHFDRVKLPQDALLGQEGRGFHIMMSVLDKGRVGIAALAVGIA 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  L  A+ YA+ R   G  + +   ++  +AD+A DI AA  L    A   +  +    
Sbjct: 252 QAGLEAALDYAQTRKQFGSHIAEFQGIQWMLADMATDIQAARLLVHDAAERLEAGE---- 307

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A I   + K +    A    A A++  GGSGYI    + R YR++    I  G+  
Sbjct: 308 ---RASIACSMAKCFAGDTAVKHSANAVQIFGGSGYIRGYEVERLYRDAKITQIYEGTNQ 364

Query: 449 AMVLDVLNLL 458
                V   L
Sbjct: 365 IQRTIVARDL 374


>gi|163745778|ref|ZP_02153137.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161380523|gb|EDQ04933.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 374

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 76/361 (21%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL C      +        H+         A L +      S   A  + 
Sbjct: 35  RETWVQAGELGLLCPSVPEEYGGAGGDFGHEAAILIEGSRANLASWGHGIHSGIVAHYIL 94

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W PK+ S E             +   L +TE   G+D+  I ++  +  +
Sbjct: 95  AYGTEDQKKRWLPKMVSGE-------------LVGALAMTEPSTGSDVQRIKTKAVRDGN 141

Query: 224 GIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGN 281
             Y LSG K F+++       I+ A+ + + G   V  ++ + G   G    R  +KIG 
Sbjct: 142 A-YKLSGQKTFITNGQHANLIIVAAKTDPKEGSKGVSLVVVETGGAQGFQRGRNLDKIGL 200

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            +  T EL F N        L      G  + MK L    L     +V  M  ++A  I 
Sbjct: 201 PAADTSELFFDNVEIAPENILGQEEGQGFYQMMKQLPQERLIIGCGAVGAMEGAVARTIA 260

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   GG L      +  +A++    A + A         DE  S           A
Sbjct: 261 YCKEREAFGGPLTQFQNTRFQLAEVKTKTAVSRAF-------LDECISEHLRGELTVDKA 313

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW       V+   ++  GG G+++E ++   + ++    I  G+   M   +   
Sbjct: 314 AMQKYWLTDTQGEVLDACLQLHGGYGFMQEYAVGEMWADARVQRIYGGTNEIMKELIARS 373

Query: 458 L 458
           L
Sbjct: 374 L 374


>gi|260576256|ref|ZP_05844248.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259021524|gb|EEW24828.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 567

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 86/467 (18%), Positives = 175/467 (37%), Gaps = 46/467 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +       L R  + +  +L A         +V   P +    R     G        
Sbjct: 45  ARLSETELAPLQRAGDTHPARLEA--------GRVIASPGFAEGYRGIAAGGWVGIAASP 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            F  +    A       +   A L        +      +    +P +   + PK+ S +
Sbjct: 97  EFGGMGLPMALTSAVNEMMGSACLALHLNPLLTQGQIEALEHHASPEIKALYLPKLISGD 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE + G+D+ A+ ++ +  +DG Y ++G K F+S   +D 
Sbjct: 157 WCGT-------------MNLTESQAGSDVGALRAKAEPNADGTYAVTGQKIFISWADADF 203

Query: 243 -----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++         +  FLVP+ + D     G+ N L    L++K+G   + T
Sbjct: 204 AANICHLVLARLPDAAPGTRGISLFLVPKFIPDAAGNPGARNSLSVVSLEHKMGLHGSPT 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +++    G+L+G  +     +  M     L   +  ++    +   A+ YA  R    
Sbjct: 264 AVMQYDAAKGWLIGAPHKGMAAMFTMMNNARLGVGVQGIAAAEGAYQLALDYAMDRKQGK 323

Query: 347 GI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARIMAP 398
                   +ID   ++R +  +  +I AA A++   A + D A++   ++  A A ++ P
Sbjct: 324 TPVPGAGAIIDHADVRRMLVQMRAEIFAARAIALSCAVATDMARATGSADWQARAALLTP 383

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NL 457
           I K         V +  ++  GG G+IEE   A++ R+    +I  G+     +D++   
Sbjct: 384 IAKACGTDTGVNVASLGVQVHGGMGFIEETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRK 443

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           L  G     +L   +E    ++      +     +  +  +    +L
Sbjct: 444 LADGGEAAFRLLEEVEAQAEAARGAFPNMATAVWNAAETLRETTEWL 490


>gi|167921973|ref|ZP_02509064.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 377

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+    P    ++ +    G    I    +            A           
Sbjct: 26  PNAAQWDRESHLPD--EIVAQMGELGFLGMIVPADWGGSYTDYVAYALALEEIAAGCASC 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L+S   +      L   T      W   + S                     LTE   
Sbjct: 84  ATLVSVHNSVGCGPVLNYGTAEQKARWLRDLASG-------------KTVGAFSLTEPHA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGS 266
           G++   + ++ + + DG + L+G K F+++       I+ A  +   G   +   +    
Sbjct: 131 GSEAHNLRTRAE-LRDGKWILNGSKQFVTNGARAGLAIVFAMSDPDEGKRGLSAFVVSTD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G    + + K+G R++ T  +   N     +   N+     E +KI L  L+   + +
Sbjct: 190 TPGFIVGKPEKKMGIRASDTCPITLENC---AIAQENLLGKRGEGLKIALSNLEGGRIGI 246

Query: 326 SGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +       A  YAR R   G  + +   +   +A++A  I AA  L+   A   
Sbjct: 247 AAQATGIARAAFDRARRYARERVQFGKPIAEHQAIAEKLANMATRINAARLLTHHAARLR 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E       A   K +  +MA AV ++A++  GG G++ +  + RHYR++   
Sbjct: 307 TAGLPCLSE-------ASQAKLFASEMAEAVCSDAIQIHGGYGFLADYEVERHYRDARIT 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 360 QIYEGTSEVQRMVIARQL 377


>gi|182889908|gb|AAI65798.1| Acadm protein [Danio rerio]
          Length = 424

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 131/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 50  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           + +                      +  +      V +       K +  ++        
Sbjct: 101 MGQGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDAQRKKYLGRMT------- 153

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K  D         W  +   ++ + +L
Sbjct: 154 ------EELLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLL 207

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 208 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 264

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 265 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 325 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 378 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 416


>gi|52081769|ref|YP_080560.1| Acyl-CoA dehydrogenase YusJ [Bacillus licheniformis ATCC 14580]
 gi|52787155|ref|YP_092984.1| YusJ [Bacillus licheniformis ATCC 14580]
 gi|319647685|ref|ZP_08001903.1| YusJ protein [Bacillus sp. BT1B_CT2]
 gi|52004980|gb|AAU24922.1| Acyl-CoA dehydrogenase YusJ [Bacillus licheniformis ATCC 14580]
 gi|52349657|gb|AAU42291.1| YusJ [Bacillus licheniformis ATCC 14580]
 gi|317390026|gb|EFV70835.1| YusJ protein [Bacillus sp. BT1B_CT2]
          Length = 594

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 167/482 (34%), Gaps = 62/482 (12%)

Query: 94  WDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E H   H   LL+++   GL  +     +  +   +         +  A   +   
Sbjct: 53  IDEIEEHNFDHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSY 112

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        +    T    K + P + + E                   LTE   G+D 
Sbjct: 113 GAHVGIGTLPIVFFGTEEQKKKYLPSLATGE-------------KFAAYALTEPGSGSDA 159

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +       G  Y L+G K W  +S  +D FI+ A+++G          + +   +G
Sbjct: 160 LGAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKIDGEH----FSAFIVEKDYSG 215

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVS 326
           +     + K+G + ++T  L            L     G V    IL       A+ ++ 
Sbjct: 216 VSTGPEEKKMGIKGSSTRTLILDQVQVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIG 275

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
             +  +  +  YA +R      +    ++   IA++++ + A  +  +R    F++    
Sbjct: 276 ASKRVIELSASYANQRQQFKTPISKFSLIGEKIANMSVKLYAMESSVYRTVGLFEDKMGT 335

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                    +  ++  A   I   + K +  +    ++ E ++  GG G+++E  + R Y
Sbjct: 336 LSEEEQKDGRQVAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAY 395

Query: 435 RESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           R+S  N I  G+     L V            L L EK   L E+L   + ++ G     
Sbjct: 396 RDSRINRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKALQEELMMLMPEEPGD---- 451

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                     + +++K L R   +K AL  +  A  + G     +  +     D     +
Sbjct: 452 ---------GVLEQEKYLLRN-AKKTALMIAGLAAQKYGKALDQEQEILVNIADIVSQIY 501

Query: 543 CM 544
            M
Sbjct: 502 AM 503


>gi|311742080|ref|ZP_07715890.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314573|gb|EFQ84480.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 380

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 135/376 (35%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+KV   P    +  ++   GL   +    +         +  A     + ++ A
Sbjct: 27  PHHDEWEKVGIVP--REIWEKAGALGLLGFMMPEEYGGGGVDD-FRYNAILTEEITRIGA 83

Query: 149 GHLM--SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             +     +   +  +    +      W PK  + E                 + +TE  
Sbjct: 84  SGIGFVIQTDLVSGYLLSYASDEQKARWLPKFCTGE-------------TITAIAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+  I +      D  Y ++G K F+++ + +D  +++ Q +   G      +  + 
Sbjct: 131 TGSDLQGIKTSAVLDGDE-YVINGSKTFITNGINADLVLVVCQTDPSAGAMGFSLIAVER 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +KIG ++  T EL F N       L+G+       + +      L  ++
Sbjct: 190 GAEGFERGRNLDKIGLKAQDTAELFFDNVRVPKENLIGEPGQGFIYLMEKLPQERLSISV 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++ +  R  +   + Y + R   G  +      +  +A +  +   A           DE
Sbjct: 250 VAAAACRRVIDMTVDYVKERKAFGKPIGSFQNSRFTLATLETEARIAQVFV-------DE 302

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           + ++          A + K+W  ++    + + ++  GG GY+ E  I++ Y ++   +I
Sbjct: 303 SITQLNAKQLTVDDAAMGKWWTTELQKKTVDQCLQLHGGYGYMSEYPISKAYLDTRIQTI 362

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 363 YGGTTEIMKEIIGRGM 378


>gi|196014205|ref|XP_002116962.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens]
 gi|190580453|gb|EDV20536.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens]
          Length = 609

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 75/448 (16%), Positives = 160/448 (35%), Gaps = 35/448 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G    +    +  +  K     R   ++    L     +          + L  T   
Sbjct: 106 EIGGMGFLAPEQYGGLGLKNTQYARILEIFGKYDLSFSVTVGGHQSIGYKGLVLFGTDEQ 165

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
            + + P + +                     LTE   G+D A++ ++     DG  Y L+
Sbjct: 166 KQKYLPDLATG-------------KKIAAFCLTEPMAGSDAASLRTKAVLDDDGKHYILN 212

Query: 230 GHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G+K W  +   +D   + A+V     +       +   + +    G+     + K+G +S
Sbjct: 213 GNKIWITNGGFADIMTVFARVVRRKEDSDETTEGITAFIVERDFPGVTSGPAEKKMGLKS 272

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSV--SGMRVSLAEAIHYAR 340
           + T  + F N    +   +  V  G    M IL      +++V    +R+ +++   +A 
Sbjct: 273 SNTASIYFDNVKVPVENMIGKVGEGFKVAMNILNNGRFGLIAVSSGLIRMLVSKTSEHAN 332

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      LI+  V++  +A +A+   A  ++++ L N+ D   +        ++ A ++
Sbjct: 333 NRIQFNQKLIEFQVVQEKLAKMAMAHYAVESIAYILCNNMDRGITN------FQLEASMS 386

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457
           K +  + A     E ++ +GG+GY+ +  I RH R+     I  G+ + + + + +    
Sbjct: 387 KIFATEAAWHCCDECIQVLGGNGYMRDNEIERHLRDIRVYRIFEGANDTLRVHIASDGIY 446

Query: 458 -LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
              K     ++L +        +      ++       ++         E+ A A     
Sbjct: 447 SAAKNMRENQKLLNEFGSQKSVTEPHGKKLIEAVAPSLRDSAIKVTGCVEEFASAVR-IL 505

Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHCM 544
           L + G N     FL  R  D     + M
Sbjct: 506 LLKHGKNIGNQQFLLTRLADTAIDLYVM 533


>gi|126643031|ref|YP_001086015.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 361

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 138/378 (36%), Gaps = 27/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
            P    WD+ E  P    L +++   GL    +   +  +          A + +     
Sbjct: 2   TPFVNEWDEAETFP--RELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGS 59

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +      A  +    +  +       I S E                 L +TE 
Sbjct: 60  GGVHISLMVHTIGAPPIQHFGSEELKARVLSGIISGE-------------KISALAITEP 106

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLE 263
            GG+D+AA+ ++  +  D  Y +SG K F++S + +D + +  + +  + G   +  LL 
Sbjct: 107 GGGSDVAALQTKAIRDGDN-YIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLI 165

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G+    LK K+G  ++ T  L F         LLG  N     + +   +     
Sbjct: 166 DAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQENAGFKVIMNNFNMERFFL 224

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +++     +   EA+ +A++R   G  LID  V++  + D+A  + +  AL    A   
Sbjct: 225 GVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKM 284

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K +  E         + K    +        A++ +GG G++      R YRE   N
Sbjct: 285 TQPKLQGPE---LVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVN 341

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 342 MIGGGAEEIMKDLISKQL 359


>gi|313234476|emb|CBY24676.1| unnamed protein product [Oikopleura dioica]
          Length = 384

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 125/374 (33%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P    +  ++   GL     D     +          A          
Sbjct: 26  PKAAEYDQTMEYP--QEIFAKAWELGLVNGHVDPDLGGLGLGCLESCIIAEELAYGCTGM 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +   +  + +  +  + +++  ++ +                    G+TE   G
Sbjct: 84  ETAIEANSLGSMPLLIGGSDELKQEYLGRLLAEPIQ-------------AAYGVTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D++ + ++ +K+ D         W  +  +++ + +LA+      C         + + 
Sbjct: 131 SDVSGLKTKAEKVGDEWVLNGEKMWITNGGVANWYFVLARTNPDPKCPSSKAFTGFIVER 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+   R +  +G R + T  + F N        +  V  G +  M          A 
Sbjct: 191 EWEGVNPGRKEINMGQRCSDTRGIRFENVRVPEKNVIGEVGKGFIYAMAAFDNTRPPVAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +    + +L EA  Y+  R   G  ++    +   +A++A        ++++ A   D 
Sbjct: 251 AATGLSQRALDEATKYSFERKTMGKPIVQHQAISFLLAEMASRTELGRLMTYKSAWQVDT 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +         A I K +    A    ++A++  GG+G+  E  + +  R++    I
Sbjct: 311 GNRNT-------FNASIAKLFAGDAANQNASDAVQIFGGNGFNSEYPVEKLMRDAKIFQI 363

Query: 443 LLGSGNAMVLDVLN 456
             G+     L +  
Sbjct: 364 YEGTSQIQKLIIAR 377


>gi|109899026|ref|YP_662281.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109701307|gb|ABG41227.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 391

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 137/382 (35%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +D+ + +P  HAL  +    GL  +   +++  +    +   +       A +  
Sbjct: 27  PIAKEYDQEDKYP--HALAEQMKELGLFGATIGQAYGGLGLPASIYAKIVMKVASAWMAP 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +  +  AS +    T    + + P + + E             +  G+ LTE   G
Sbjct: 85  SGIFNSHLIQASAIERCGTQAQKERFLPLMATGE-------------LRGGVALTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRL 261
           TD+ AI +   K  D         W  +S   ++  +L + +            F+V   
Sbjct: 132 TDLQAIRTTAVKDGDDYIINGAKTWITNSLNGNSLAVLVKTDLDAVPAHTGTSMFIVETK 191

Query: 262 LEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGPVEDMKILI 316
            E+G    G+   ++K K+G RS  T E+ F N        +                L 
Sbjct: 192 DENGEFKAGITVSKMK-KLGYRSIDTCEVVFENVRVPAANLVGEKEGSGFKHAIGGLELG 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A       R +   A+ YA+ R   G  +     ++  + ++A  + AA  L  + 
Sbjct: 251 RINVAARGAGIARGATELAVRYAQERETFGKAICQHQAIQLKLGEMATQVEAARLLIEQA 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  +D  +    EA  A+        +C         EAM   GG  Y  E  I R+YR+
Sbjct: 311 AAKYDANERCDMEAGMAKYFGSEAGVFC-------ANEAMRIFGGYSYSVEYDIERYYRD 363

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+     + +   +
Sbjct: 364 AMLMCIGEGTNEMQRIIIAKQI 385


>gi|320168237|gb|EFW45136.1| ATP-binding cassette subfamily E [Capsaspora owczarzaki ATCC 30864]
          Length = 428

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 137/397 (34%), Gaps = 36/397 (9%)

Query: 69  TAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             Q++AR   AN   P+   +   G      E+    H +++++  +GL      + ++ 
Sbjct: 52  EFQDVARKFAANEIIPKAEYHDRTG------EYP---HEIIKKAWENGLLNLYIPKQYDG 102

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +       +                +  +  + + V L  +  + K +  ++        
Sbjct: 103 LGLGSMDGVLICEELAFGCTGMSTALEANALAEAPVILGASEVLKKKYLGRMT------- 155

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A + +   K  D         W     +++ + +L
Sbjct: 156 ------EAPLLAAYCVTEPGAGSDVAGLKTTAVKKGDEYIINGSKMWITGGGVANWYFVL 209

Query: 247 AQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+               + +    G+   + ++ +G R + T  + F +        + V
Sbjct: 210 ARTGDANTPTGRAFTGFIVESDTPGITKGKKEDNMGQRCSDTRGITFEDVRVPASNVVGV 269

Query: 305 STGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             G  +             A  ++   R +L EA+ YA +R   G  + +   +   IAD
Sbjct: 270 EGGGFKLAMGAFDHTRPSVAAGALGLARRALHEAVLYALQRKTFGKPIAEHQSVSNIIAD 329

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+ +  +    +R A   D     +         A I K      A    ++A++  GG
Sbjct: 330 MAVGVETSRLAVWRAATELDAGNRNT-------YYASIAKCLAGDTAVKNASDAIQVYGG 382

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G+     +++ YR++    +  G+     L +   L
Sbjct: 383 LGFNSGSVVSKLYRDAKIFQLYEGTQQIQRLIIAREL 419


>gi|294084749|ref|YP_003551507.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664322|gb|ADE39423.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 590

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 90/494 (18%), Positives = 183/494 (37%), Gaps = 58/494 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHA----YGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           + ++    +E  ++A      L+      G        V     + A  +     G    
Sbjct: 33  DDLVEAVLEEAGKVAGDIIAPLNHDGDVLGATRHDDGSVSLPDGFGAAWQALATGGWIGF 92

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D                + ++  A +        +  +   +  + +P     + P +
Sbjct: 93  EADPDHGGQGLPLCLGSVVSEMWNSANMSFALCHLLTQGAIDALEQVASPEQKATFLPNL 152

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E+  T             + LTE + GTD+ A+ +      D  Y + G K +++  
Sbjct: 153 ISGEWSGT-------------MNLTEPQAGTDLGALRTMATPNGDH-YLIKGQKIYITYG 198

Query: 239 MSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA+          +  F VP++L +     G  N +    ++ K+G +
Sbjct: 199 QHDMSKNIIHLVLARTPDAPDGVKGISLFAVPKILVNDDGSLGEANDVFCVSIEKKLGIK 258

Query: 283 SNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  L++ +     G+L+G+ N     +  M         +  V+    +  +A+HYA
Sbjct: 259 ASPTAVLQYGDNNGAVGYLIGEENKGLEYMFLMMNNARFAVGMQGVAISERAYQQAVHYA 318

Query: 340 RRRHV-------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
             R          G  +I  P + R +  +  +I A  AL        D++      A  
Sbjct: 319 HDRVQGTPIAGNKGDSIIHHPDVLRMLTIMKAEIEAMRALMVVGGACLDKSHGDENAAFW 378

Query: 391 -AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A ++ P+ K W  + + A+ ++A++  GG G+IEE  +A+HYR++    I  G+   
Sbjct: 379 HERASLLIPVIKGWMTERSQALTSDAVQIHGGMGFIEETGVAQHYRDARILPIYEGTTAI 438

Query: 450 MV--LDVLNLLEKGTNLFEQLFSTLEQDLGS-------SGKKVITILRDSISLCKE--DK 498
               L     L  G      LF+ ++ D+ +       S   +   ++ ++   ++  D 
Sbjct: 439 QANDLVFRKTLRDGGAAVTSLFADIDTDMNAIITTQNDSTMALAKQVKQAVDTGRQALDS 498

Query: 499 GLARFLTEKIALAS 512
            LAR    + A A+
Sbjct: 499 LLARANNPRDAAAA 512


>gi|289640641|ref|ZP_06472813.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289509530|gb|EFD30457.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 399

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 124/382 (32%), Gaps = 36/382 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           EF  A    ++     GL        +  +                  +    +++    
Sbjct: 41  EFPEAIVEAMK---EMGLFGITIPEEYGGLGESLLTYALVVEEIARGWMSVSGVINTHFI 97

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++    TP   +   PK+ + E                   ++E   G+D++AIT++
Sbjct: 98  VAYLLIQHGTPEQKQRLLPKMATGEIRG-------------AFSMSEPGCGSDVSAITTR 144

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLEDGSPNGL 270
                D         W  +   +     L + +            FL+ +    G+  G+
Sbjct: 145 ATPDGDDYVINGQKMWLTNGARAGLVATLVKTDEGADSVYRNMTTFLLEKEPGFGTHEGI 204

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
                  K+G +   T E+   N        L    G  +    ++       ++ A  +
Sbjct: 205 TIPGKLEKLGYKGVETTEMVLDNHRVPAASILGGLDGRGKGFYQMMDGVEVGRVNVAARA 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M  +   AI YA++R   G  + D   +   +A++A  + A   +    A   D  +
Sbjct: 265 CGIMIRAFELAISYAQQRRTFGHQIADHQAIAFKLAEMATKVEAGHLMMVNAARKKDSGQ 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA  A+ +A        +    V  E+    GG GY +E  I R +RE+P   I  
Sbjct: 325 RNDVEAGMAKYLA-------SEYCFEVTTESFRIHGGYGYSKEYEIERLFREAPFMLIGE 377

Query: 445 GSGNAMVLDVLNLLEKGTNLFE 466
           G+       +   L +   L +
Sbjct: 378 GTSEVQKRIISRALLRDYKLQQ 399


>gi|256043966|ref|ZP_05446882.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|260565142|ref|ZP_05835627.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260152785|gb|EEW87878.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
          Length = 380

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 125/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +      ++R    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVRVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIASFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMAR-MGGSGPSGISAFLAERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 378

Query: 460 K 460
           +
Sbjct: 379 R 379


>gi|328877386|pdb|3R7K|A Chain A, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877387|pdb|3R7K|B Chain B, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877388|pdb|3R7K|C Chain C, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
 gi|328877389|pdb|3R7K|D Chain D, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
           From Mycobacterium Abscessus Atcc 19977  DSM 44196
          Length = 403

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 87/424 (20%), Positives = 153/424 (36%), Gaps = 39/424 (9%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
           S D     ++A   +    E   L +   S   +E+A       P+L         W+ V
Sbjct: 14  SEDGAARFVVAPE-AWTTPERRALSQMARSFVEREIA-------PKL-------AEWEHV 58

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P    L   +   GL    +                     L A           V 
Sbjct: 59  GEIP--RDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGST------GVC 110

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A     +  P +  + +  +  R   PT         +   LG+TE   G+D+A + ++
Sbjct: 111 AALFTHGIALPHIAANGSDALIERYVRPTL-----AGKMIGSLGVTEPGAGSDVANLRTR 165

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G    R  +
Sbjct: 166 AVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLD 224

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R + T EL F +       L+G  N     +        L  A+ + +    +L  
Sbjct: 225 KMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDL 284

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  +AR R   G  L  + +++  +A++A  +  A   +  +   +   +    E + A+
Sbjct: 285 AKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAK 344

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A     +       V+ EA++  GG GY+ E  I RHYR+     I  G+   M   +
Sbjct: 345 NTAVYACDY-------VVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVI 397

Query: 455 LNLL 458
              +
Sbjct: 398 AKRI 401


>gi|222480906|ref|YP_002567143.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453808|gb|ACM58073.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 386

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 68/402 (16%), Positives = 126/402 (31%), Gaps = 30/402 (7%)

Query: 62  GEYVLSCTA--QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           G  V S     QE  R             PG    D+ E  P    +        L    
Sbjct: 3   GARVGSSLTDEQEAIRDLVREFAAEEVR-PGAGEADEAESFPE--EVWDGLAELDLTGLT 59

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               +      +              L     +S    + S +A   +    + W P++ 
Sbjct: 60  VPEEYGGFDADETTYAVVNEELAYGHLAVATALSVHCLATSCIAEFGSEAQRERWLPEMA 119

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSS 237
                        +        L+E   G++ A +++  +    +D        +W  + 
Sbjct: 120 ------------AEGRPVGMFCLSEPHAGSNPAEMSTTAEYDPEADEYVLNGEKQWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                 I+ A+ +G      + + L      G    + + K+G R++ T  + F +    
Sbjct: 168 QRGGVAIVFAKTDGDD-ERSITQFLVPADTEGFAVGKKEEKLGLRASDTTGISFDDCRIP 226

Query: 298 LLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                 +                +  A  +V   + +  EA  YA  R   GG + D   
Sbjct: 227 AENRLTEEGKGLSAAFRTLTGGRIGIASQAVGLAQAAFDEAKAYAAEREQFGGPIDDIQT 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++   A++A DI+AA  L        +  +     A+ A       KY   + A +V  E
Sbjct: 287 IQHTFAEMATDISAARLLVREACRQAEAGEDNRVAASKA-------KYRASETAMSVTNE 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A++  GG GY  +  + R YR++    I  G+       +  
Sbjct: 340 AVQIHGGYGYTTDFDVERFYRDAKITEIYEGTTEIQKTIIAR 381


>gi|154309163|ref|XP_001553916.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852519|gb|EDN27711.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 443

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 136/378 (35%), Gaps = 36/378 (9%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
              D+ E   PA   ++ +    GL        +          I               
Sbjct: 89  RDMDEAESMDPA---VVEQLFEQGLMGVEIPEEYGGAGMNFTAAIVGIEELARVDPSVSV 145

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           L+    T  +   +   +  +   W PK+               T+      L+E   G+
Sbjct: 146 LVDVHNTLVNTAVIKYASKELKNKWLPKL--------------ATNTVGSFCLSEPVSGS 191

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A+ ++  K   G        W  +S  ++ FI+ A ++   G   +   + +    G
Sbjct: 192 DAFALATKATKTDSGYTISGSKMWITNSMEAEFFIVFANLDHSKGYKGISAFVVEKGMKG 251

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
               + + K+G ++++T  L F +     +   N+     +  K  I  L+   + ++  
Sbjct: 252 FSIAKKEKKLGIKASSTCVLNFDDV---EIPRENLLGEEGQGYKYAIALLNEGRIGIAAQ 308

Query: 329 RVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              LA      A  Y    R   G ++ D   M+  IA    +IAAA AL +  A   + 
Sbjct: 309 MTGLALGAFENATKYVWNDRKQFGQLVGDFQGMQHQIAQSYTEIAAARALVYNAARKKEA 368

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  ++AA A       K +  ++A  V   A   +GG G++ E    + +R+    SI
Sbjct: 369 GENFVQDAAMA-------KLFASQVAQRVSGLAGSWMGGMGFVREGIAEKMWRDWMIGSI 421

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+ N  +  +  LL++
Sbjct: 422 YEGTSNIQLTTIAKLLKQ 439


>gi|319763044|ref|YP_004126981.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825124|ref|YP_004388427.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117605|gb|ADV00094.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310496|gb|AEB84911.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 596

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 89/486 (18%), Positives = 186/486 (38%), Gaps = 59/486 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSIH 112
              E  G    +   +E A+        L       P   +   V     +    R+   
Sbjct: 27  PGFEDAGLETAAAVLEECAKFNEGVVAPLSVAGDRDPSSFKDGVVTTTLGFKEAFRQFAE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRV 170
            G         F      +   I AA   ++        + P +T  ++ AL+T  +  +
Sbjct: 87  GGWQGLQHPADFGGQGLPK--TIGAACGEMLNSANLSFALCPLLTDGAIEALLTAGSDAL 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              +  K+ S ++  T             + LTE + G+D+A + ++ +  +DG Y L G
Sbjct: 145 KATYLEKLISGQWTGT-------------MNLTEPQAGSDLALVRTRAEPQADGTYKLFG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+V G       +  F+VP+ +       G+ N +    
Sbjct: 192 TKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVVPKFMVHADGSLGARNDVHCVS 251

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +++K+G +++ T  L+F +     G+L+G+ N     +  M         +  ++    +
Sbjct: 252 IEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRGLEYMFIMMNAARYAVGVQGIAVAERA 311

Query: 332 LAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANSF-- 380
             +A+ YA+ R  S            +I  P ++R +  +         ++   A ++  
Sbjct: 312 YQKAVQYAKDRVQSRPVDGSVAGSAAIIHHPDVRRMLMTMRAYTEGCRGMASVAAAAYDA 371

Query: 381 ----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                +A+ R + AA+   M P+ K +  +M+  V +  ++  GG G+IEE   A++YR+
Sbjct: 372 AHHHPDAQVRKDNAAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRD 431

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRDSI 491
           +   +I  G+       L        G  +   + + +E+  G   +SG      +   +
Sbjct: 432 ARILTIYEGTTAIQANDLVGRKTARDGGQMARAVAAQIEKTEGELIASGTADAQAVARRL 491

Query: 492 SLCKED 497
              ++ 
Sbjct: 492 GAARQA 497


>gi|302866027|ref|YP_003834664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302568886|gb|ADL45088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 380

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 143/416 (34%), Gaps = 45/416 (10%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
            +    VH E   L    L+  A           P    +   G   D+         + 
Sbjct: 3   QHLYEPVHDEFRDLCRRFLTREA----------VPHHERWEADGI-VDR--------EVW 43

Query: 108 RRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R +   GL     D  +     R            + A          +   A  +  +T
Sbjct: 44  RAAGAAGLLGPDVDPEYGGGGQRDFRFNAVLDEEIVAAGCTGLGFGLHNDVVAPYLTELT 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W P   S               +   + ++E   G+D+A I +   +  D + 
Sbjct: 104 TGDQRKRWLPGFCSG-------------DLVTAIAMSEPGAGSDLAGIRTSAVRDGDSL- 149

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  M+D  +++A+     G   V  ++ +    G    R   K+G ++N 
Sbjct: 150 VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLVVVESGTPGFSRGRRLAKVGLKAND 209

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F +       L+G  N     +        L  A+ +V+     LA  I YAR R
Sbjct: 210 TAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSIAVAAVAACEKLLALTIEYARSR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      +  +A++  ++  A          F+  +    +AA A+        
Sbjct: 270 EAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAAKAKW------- 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  ++   V    ++  GG G++ E  +A+ + +S   +I  G+   M   +   L
Sbjct: 323 WTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIMKEIIGRGL 378


>gi|295699821|ref|YP_003607714.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439034|gb|ADG18203.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 423

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 139/394 (35%), Gaps = 35/394 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           Q + R A  +        P   +WD+    PA   ++ +    G    +    +      
Sbjct: 55  QRMIRDAARDFAT-ECLAPHAAQWDRDAQLPA--EVVAQMGELGFLGMMVPAEWGGCYTD 111

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA 189
                 A             LMS   +      L   +      +  ++ +         
Sbjct: 112 YVAYALALEEIAAGCAACATLMSVHNSVGCAPILNFGSAAQKDRYLRELATG-------- 163

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ 248
                       LTE + G++   + ++ ++  DG + L+G K F+++       I+ A 
Sbjct: 164 -----RTIGAFCLTEPQAGSEANNLRTRAERR-DGQWILNGSKQFVTNGARAGLAIVFAV 217

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +   G   +   +   S  G    R ++K+G R++ T  +           + N+   P
Sbjct: 218 TDPERGKRGLSAFIVPTSTPGFDVGRPEHKLGIRASDTCPISLDRCAVP---EANLLGEP 274

Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            E ++I L  L+   + ++   V +       A  YA  R   G  L D   +   +AD+
Sbjct: 275 GEGLRIALSNLEGGRIGIAAQAVGIARAAFDAARRYASEREQFGKPLKDHQTIANMLADM 334

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L    A      +    E       A   K +  ++A  + + A++  GG 
Sbjct: 335 ATRLNAARLLVHHAARLRSAGRPCLSE-------ASQAKLFASELAEEICSNAIQIHGGY 387

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY+E+ ++ RHYR++    I  G+     + +  
Sbjct: 388 GYLEDYAVERHYRDARITQIYEGTSEVQRMVIAR 421


>gi|86750377|ref|YP_486873.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86573405|gb|ABD07962.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 385

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 139/392 (35%), Gaps = 29/392 (7%)

Query: 77  ANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A+++ P+  L  +      P  + W+K    PA H L ++    G         +     
Sbjct: 5   ADHDEPRRVLQKFIASDINPHVDEWEKAGIFPA-HELFKKLGDLGFLGLNKPVEYGGQGL 63

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             ++ +      +MA+            +  +   M TP +      K  S E      A
Sbjct: 64  DYSYAL------MMAEELGNINCGGVPMAIGVQTDMATPALA-----KFGSDELRKEFLA 112

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         +G++E   G+D+A+I +  +   D      G  W  +   +D   +L   
Sbjct: 113 PSISGDFVACIGVSEPGAGSDVASIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNT 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGP 308
                      +       G+   R  +K+G  S+ T ++ F          +     G 
Sbjct: 173 GDGPAHRNKSLICVPMKSKGVSIARKLDKMGMHSSDTAQIHFDEVRVPKRNRIGEEGAGF 232

Query: 309 VEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              M       L  A   +     ++   I Y R R   G  L+D  V+   +A++  ++
Sbjct: 233 TYQMVQFQEERLWGAAACIKAHERTIQNTIDYTRDRKAFGRPLLDNQVIHFKLAELQTEV 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
               +L +R A +    +  ++       +A + K    ++   +    ++  GG G++ 
Sbjct: 293 ELLRSLVYRAAEALVAGEDVTQ-------LATMAKLRAGRLGRELPDACLQYWGGMGFMN 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  ++R YR+S   SI  G+   M+  +  ++
Sbjct: 346 ETLVSRSYRDSRLTSIGGGADEVMLGILCKMM 377


>gi|47939362|gb|AAH71366.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio]
          Length = 442

 Score =  249 bits (636), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         +  ++   GL           +              + +     
Sbjct: 85  VPYHAQWEKAGEVSREVWEKAGEHGLLGVYTPEEHGGIGGDLLSAAIVWEEQMYSNCSGP 144

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      ++   +    + + P++ + +                 + +TE   G+
Sbjct: 145 GFSLHSEIVMPYISHYGSKAQIERYIPQMAAGKC-------------IGAIAMTEPGAGS 191

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++  MSD  I++A  +   +     +   L D  
Sbjct: 192 DLQGVKTFAKKDGTD-WILNGSKVFITNGWMSDVVIVVAVTDREAKTAAHGISLFLVDRG 250

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   K+G ++  T EL F +       LLG +N     + +      L  A+M
Sbjct: 251 TKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQVNKGFYYLMNELPQERLLIAVM 310

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            ++       E+ +Y  +R   G  + D  V++  +A++  +I    A         D  
Sbjct: 311 GLASCEFMFEESRNYVMQRKAFGRTIADLQVVQHKLAELKTEICVGRAF-------IDSC 363

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E       A + KYW   +   V  + ++  GG GY+ E  IA+ + ++    I 
Sbjct: 364 LQLHSEKKLDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIY 423

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 424 GGTNEIMKELISRNI 438


>gi|84495355|ref|ZP_00994474.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384848|gb|EAQ00728.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 387

 Score =  249 bits (636), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 131/364 (35%), Gaps = 26/364 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H         +   GL C      +       AH+         A  +A      S   A
Sbjct: 45  HQVDKETWLAAGAAGLLCISIPEEYGGGGGTFAHEAAVMWEQGRAADDAFGYSVHSSIVA 104

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + W P++ + E             +   + +TE   G+D+  I +  +
Sbjct: 105 HYLLNYGSEEQKQRWLPRMATGE-------------LVGAIAMTEPSTGSDLQRIRTTAK 151

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNK 278
           +  D  Y ++G K F+++      +++    G  G   V  ++ E     G    R+  K
Sbjct: 152 RDGDH-YVINGSKTFITNSSHAGLVVIVARTGGEGAQGVSLIVAEVDGLEGFERGRVLQK 210

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
           IG     T EL F++    +   L      G  + M  L    L  A+ +V+    ++  
Sbjct: 211 IGQHGQDTRELSFTDMLVPVGNLLGDSEGQGFYQLMLQLPQERLAIAVGAVASAEKAVEL 270

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI Y++ R   G  +     ++  +A+++ D+ AA            E +  +  A+ A 
Sbjct: 271 AIAYSKEREAFGKPIGSFQTLRFTLAEVSTDVLAARTFLDYCIGLHVEGRLDAATASRA- 329

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KYW   +   VI   ++  GG GY+ E  IAR Y  +    I  G+   M   +
Sbjct: 330 ------KYWTTDVQCDVIDRCLQVFGGYGYMLEYPIARMYAGARVQKIYGGTNEIMKELI 383

Query: 455 LNLL 458
              L
Sbjct: 384 SRTL 387


>gi|160773274|gb|AAI55273.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 130/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 50  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                        +  +      V +       K +  ++        
Sbjct: 101 MGLGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDAQRKKYLGRMT------- 153

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K  D         W  +   ++ + +L
Sbjct: 154 ------EEPLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLL 207

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 208 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 264

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 265 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 325 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 378 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 416


>gi|332222217|ref|XP_003260263.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Nomascus leucogenys]
          Length = 454

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 21/293 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G+D+A I ++ +K  D         
Sbjct: 164 MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 223

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 224 WITNGGKANWYFLLARSDPDPKAPVNKAFTGFIVEADTPGVQIGRKELNMGQRCSDTRGI 283

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     KI +          A  +V   + +L EA  YA  R 
Sbjct: 284 VFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERK 340

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 341 TFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEIDSGRRNT-------YYASIAKAF 393

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 394 AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 446


>gi|91215197|ref|ZP_01252169.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
 gi|91186802|gb|EAS73173.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755]
          Length = 388

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 151/384 (39%), Gaps = 34/384 (8%)

Query: 99  FHPAWHALLRRSIHDGL------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +    H + R+S+ + L      H   W+     + R    K      + +A  E    +
Sbjct: 5   YFSEEHEMFRKSLKEFLQKEVVPHLDKWEEE-GSIERFIWKKFGDMGYFALASPEKYGGL 63

Query: 153 SPSVTSASMV--------------ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              +    ++              A+     +      K  S E      +      +  
Sbjct: 64  DLDLFYTIILLEELQKINSGGFAAAIWAHAYLAMTHVNKEGSEEIKEKYLSGSISGDMIG 123

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
            L +TE  GG+D+A + +   +  D  + ++G K F+++ + SD  I+ A+     G   
Sbjct: 124 CLCITEPYGGSDVAGMKTTAVEKED-TFVINGSKTFITNGVYSDYLIVAAKTAPEKGGKG 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +   L D    G+   +L NK+G R++ T EL F N       L+G+ N     +     
Sbjct: 183 MSIFLVDRDTPGISATKL-NKLGWRASDTAELAFDNVEIPKSHLMGERNQGFPYIMQHFA 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L   +   +    +L  AI Y   R   G  +     ++  IA+ + ++  A A ++
Sbjct: 242 LERLIMGVNGHARAEYALEYAIKYMSEREAFGQTIDKFQALRHKIAERSSEVEMAKAFNY 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +   +EA  ++++         K+A  VI + ++ +GG GY+E+  +AR +
Sbjct: 302 TTAKRLDAGEYVVKEATMSKLL-------STKIADEVIYDCLQMLGGYGYVEDYPLARMF 354

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+S    I  G+   +   +  ++
Sbjct: 355 RDSRLGPIGGGTSEILKEIIAKMV 378


>gi|92114762|ref|YP_574690.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91797852|gb|ABE59991.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens
           DSM 3043]
          Length = 593

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 94/504 (18%), Positives = 181/504 (35%), Gaps = 69/504 (13%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD 95
           +  D+LL        S+   + + L   V+    +E  R+A      L+      G R +
Sbjct: 13  FVLDTLL-----EHRSLALPQYQDLSPDVIDAVLEEAGRVAGDVWAPLNQDGDRHGCRLE 67

Query: 96  --KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
             +V   P +    R  +  G +    D         +        ++  A +       
Sbjct: 68  GGEVLTPPGFAEAYRAFVEGGWNGIGSDPEHGGQGLPEVVASAVQEMWQGANMALALCPL 127

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +   +A      +   +  K+ S E+  T             + LTE + G+D++ 
Sbjct: 128 LTAGAVEALAQHGDEALKARYLKKLVSGEWTGT-------------MNLTEPQAGSDLSV 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++        Y L G K F++    D       ++LA++         +  FLVP+ L
Sbjct: 175 VRTRAVPDGAH-YRLHGQKIFITWGEHDCAENIVHLVLARLPDAAEGNQGISLFLVPKRL 233

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKI 314
            D     G  N +    L++K+G   + T  L F       G+L+G+       +  M  
Sbjct: 234 VDAQGRLGERNDVNCVSLEHKLGIHGSPTCMLGFGERDGAIGYLVGEPGRGLAHMFTMMN 293

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALD 365
                  I  +     +  +A+ YAR R               LI+   ++R +  +   
Sbjct: 294 AARHKVGIQGIGVAERAYQQALAYARERVQGRVPKSRGGGSATLIEHYDVRRMLLSMRAR 353

Query: 366 IAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           + A  AL+        +A   +  ++R        +  PI K +    A  + + A++  
Sbjct: 354 LEALRALALLSASEMDIARHAESTEARERAQQRVDLYTPIVKAFSTDQAVDIASLAVQVH 413

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GYIEE  +A+H R++    I  G+     LD++                L++D G++
Sbjct: 414 GGMGYIEETGVAQHLRDARIAPIYEGTNGIQALDLVT-------------RKLQRDRGAA 460

Query: 480 GKKVITILRDSISLCKEDKGLARF 503
              V+  +    +   +D  LA +
Sbjct: 461 LNSVLDEVAACAASLADDPELAAW 484


>gi|322419601|ref|YP_004198824.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320125988|gb|ADW13548.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 380

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 83/413 (20%), Positives = 149/413 (36%), Gaps = 41/413 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           + +EL  L + V     +ELA  A             GE        PA    +++    
Sbjct: 5   LSEELRSLQQRVREFADRELAPGA-------AQRDASGE-------FPAQP--VQKLQEM 48

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL    +   +          +                +      AS +    +    + 
Sbjct: 49  GLFGLPFPVRYGGGGSDFVSYVTVVEELARCDASVAITLLAHTLCASHIDAFASHEQKER 108

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +   + S +                   LTE   G+D A I ++     DG + L G K+
Sbjct: 109 FLTPLASGQQ-------------LGAWALTEPEAGSDAAGIKTRAIYD-DGRWRLEGTKY 154

Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+S+   +   +++A  +   G   +   +  G   GL   +  +K+G RS+ TV L   
Sbjct: 155 FISNGSRAAVLVVMALTDPAKGGGGISAFIVPGEAEGLEKGKNLDKLGYRSSDTVALFLK 214

Query: 293 NTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                    +     G  + M++L    +  A M++   R  L +++ Y R+RH  G  +
Sbjct: 215 GVRLHEEALVGARDDGFRQAMQVLAAGRIGLAAMAIGIGRACLEQSLVYLRKRHAFGHPI 274

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            D   ++  +AD+A +I AA  L+ R A   D       EA+ A       K +  +   
Sbjct: 275 ADFQALQWMVADMATEIDAARLLTLRAARLKDRGMPFGREASMA-------KLYASEAVM 327

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
               +A++  GG+GY     + R++RE+    I  G+     L +   L K  
Sbjct: 328 RAALKAVQIHGGNGYTRAFPVERYFREAKLCEIGEGTSEVQRLLIARSLLKEG 380


>gi|224368717|ref|YP_002602878.1| Acd6 [Desulfobacterium autotrophicum HRM2]
 gi|223691433|gb|ACN14716.1| Acd6 [Desulfobacterium autotrophicum HRM2]
          Length = 600

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 99/529 (18%), Positives = 181/529 (34%), Gaps = 58/529 (10%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK- 96
             D +L   +       HK     G+  +     E   +A      L      G  ++  
Sbjct: 10  DIDFVLHEQLNVEALSEHKRFNEFGKKTVDLIVSEARNLAIKEILPLQKPSDTGCEFNNG 69

Query: 97  -VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V+    +H +++            D  +      +   + A   +  A          +
Sbjct: 70  TVKVPEGFHRVMKAYNEGEWLAMTDDPEWGGQGMPKTVAMAANEYFYGACNSFMLYNLLT 129

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             ++ +V    TP         + S ++  T             + LTE   G+D+A IT
Sbjct: 130 HGASKLVETFGTPEQKNLHLKNMLSGKWAGT-------------MLLTESDAGSDLAGIT 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLE------ 263
           +  +   DG Y L G+K F+S    D        +LA++E    G   +   L       
Sbjct: 177 TMAKDNGDGTYSLEGNKIFISGGEQDLTENIVHPVLARLEDSPAGIKGISLFLVTKYRLN 236

Query: 264 ----DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                G  N +    ++ K+G   +AT  LE        G LLG+ N     +  M    
Sbjct: 237 PDGTPGEFNNVVCTGIEEKMGLHGSATCSLELGGKGQCIGTLLGEKNKGMAAMFLMMNEA 296

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVS-------GGI---LIDQPVMKRAIADIALDI 366
                +   +    +   A+ YAR+R  S       G     +I+ P +KR +  +   +
Sbjct: 297 RQMVGLQGQANASAAYMYALDYARQRIQSKSLTAPAGTPPVAIINHPDVKRQLLMMKSWV 356

Query: 367 AAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +L +      D     ++++          ++ PI K +    A  V    ++  G
Sbjct: 357 EGMRSLVYYTGLCHDRLAIAADDSERQFYSTLLEVLTPIIKGYITDRAFDVCNHGVQIYG 416

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G+IEE  +++  R+     +  G+     +D++   + G +  E     L        
Sbjct: 417 GYGFIEEFPVSQLLRDCRIFMLYEGTNGIQAMDLVGR-KLGMHKGEPFIHFLG-----LI 470

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           +K IT  R+   L      + RF T    +A   +A  RA    + +VF
Sbjct: 471 EKTITASREVKGLESLADSMQRFFTNYAEVAHEISA--RAASGKVMEVF 517


>gi|16768578|gb|AAL28508.1| GM09085p [Drosophila melanogaster]
          Length = 333

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 122/345 (35%), Gaps = 29/345 (8%)

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +                          +M  +      V    T +  +D+       
Sbjct: 7   EEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQG 66

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                  L+E   G+D  A ++  +   D         W  +S  + 
Sbjct: 67  EH-------------IAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEAS 113

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             I+ A V+  +    +   L      GL   + ++K+G R+ +T +L   +        
Sbjct: 114 GGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRS-- 171

Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
             V     +  KI +  LD   + ++     +A+     A+ Y+++R   G  L    ++
Sbjct: 172 -RVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRMAFGKQLARLQLI 230

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+A  +  +  L++R A   D     ++EAA A++ A  +  +C         + 
Sbjct: 231 QQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFC-------AHQC 283

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +GG GY  +     +YR +    I  G+     + + N + +
Sbjct: 284 IQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLR 328


>gi|330938539|gb|EGH42122.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 505

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 83/442 (18%), Positives = 162/442 (36%), Gaps = 61/442 (13%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 1   DGAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 60

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 61  GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 107

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 108 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 167

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 168 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 227

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSR 386
                           +I  P ++R +  +      A A+ +  A   D      + + +
Sbjct: 228 MRSLTGPKAPEKAADPIIVHPDVRRMLLTMKAFAEGARAMVYFTAKQVDIVKYSEDPEQK 287

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    M PI K +  ++        ++  GG G+I E  + ++ R+S  + +  G+
Sbjct: 288 KAADALLAFMTPIAKAFMTEVGFEAANHGVQVYGGHGFIAEWGMEQNVRDSRISMLYEGT 347

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                LD+L                +    G + K    I+       + ++ +  F+T 
Sbjct: 348 TGIQALDLLG-------------RKVLMTQGEALKGFTKIVHKFCQSNEGNEVVQEFVTP 394

Query: 507 KIALASS-AAALYRAGMNDIAD 527
             AL         + GM  + D
Sbjct: 395 LAALNKEWGDLTLKVGMAAMKD 416


>gi|313204175|ref|YP_004042832.1| acyL-CoA dehydrogenase domaiN-containing protein [Paludibacter
           propionicigenes WB4]
 gi|312443491|gb|ADQ79847.1| acyl-CoA dehydrogenase domain-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 570

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 88/506 (17%), Positives = 184/506 (36%), Gaps = 59/506 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE          A   +++ P++           +V++              G++ 
Sbjct: 54  LEIIGEVCG-EIIAPNAESVDHDGPEVIN--------SRVKYARGTQENHDALTQAGVYG 104

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +       + +  +   A     ++       A  ++   +  +  ++ P+
Sbjct: 105 ITLPRQYGGLNFPMVAYVMSGEMVSRADAGFANIW-GLQDCAETISEFASDEIKAEFLPR 163

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLS 236
           +                     + LTE   G+D+ A+  +      DG++ L+G K F++
Sbjct: 164 VAEG--------------ATCSMDLTEPDAGSDLQAVQLKATYNENDGLWYLNGVKRFIT 209

Query: 237 SPMSDAFIMLAQVEGRVG-CFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           +  +   ++LA+ E        +   + E+   N +  +R++NK+G + + T EL F+NT
Sbjct: 210 NGDAQIKLVLARSEEGTSDGRGLSYFVAENKHDNTVLVRRIENKLGIKGSPTCELVFNNT 269

Query: 295 FGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              L+G   +     V  +     L     SV     +  EA+ YAR R   G  +I+ P
Sbjct: 270 PAKLVGTRRLGLIKYVMSLMNGARLGIGAQSVGLSAAAYNEALAYARDRRQFGKAIIEFP 329

Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-----------------EAKSRSEEAAYARIM 396
            +   ++ I   + A+ AL +      D                 E     E +  A  +
Sbjct: 330 AVFEMVSIIKAKLDASRALLYETTRFVDIYKAYEAIENERKLEADEKADYKEYSKLADAL 389

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K +  + A     + ++  GGSG++++ +  R +R++   +I  G+    V+  + 
Sbjct: 390 TPMLKMFTSEYANQNAYDCIQVHGGSGFMKDYACERLFRDARIMTIYEGTSQLQVVAAIR 449

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR----------DSISLCKEDKGL---ARF 503
            +  G N  + +     Q +          L+            ++  K  + L   AR 
Sbjct: 450 HVTTG-NYLKIIRDYDAQPIKPEFTSFRKRLQIMTNLYANAVARVTEAKNQEYLDFQARR 508

Query: 504 LTEKIALASSAAALYRAGMNDIADVF 529
           L E       +  L      D  D+F
Sbjct: 509 LVEMAGHIVMSYLLIIDASRDTEDLF 534


>gi|47522898|ref|NP_999204.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Sus scrofa]
 gi|1127798|gb|AAA83759.1| medium-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 421

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 136/400 (34%), Gaps = 47/400 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            TA++ AR      P    Y   GE       +P    LL+R+   GL  +    SF  +
Sbjct: 50  ATARKFAR--EEIIPVAAEYDRTGE-------YPV--PLLKRAWELGLMNTHIPESFGGL 98

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                             +    L++  +                   P I    Y    
Sbjct: 99  GLG---------------IIDSCLITEELAYGCTGVQTAIEANTLGQVPLIIGGNYQQQK 143

Query: 188 K--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           K    M +  +     +TE   G+D+A I ++ +K  D         W  +   ++ + +
Sbjct: 144 KYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFL 203

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+ +              + +    G+   R +  +G R + T  + F +         
Sbjct: 204 LARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVP---KE 260

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV TG     KI +          A  +V   + +L EA  YA  R   G +L +   + 
Sbjct: 261 NVLTGEGAGFKIAMGTFDKTRPSVAAGAVGLAQRALDEATKYALGRKTFGKLLAEHQGIS 320

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A+ +  A     R A   D  +  +         A I K +   +A  +  +A+
Sbjct: 321 FLLADMAMKVDLARLSYQRAAWEIDSGRRNT-------YYASIAKAYAADIANQLATDAV 373

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 374 QVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAR 413


>gi|215404688|ref|ZP_03416869.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|215412529|ref|ZP_03421263.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215446976|ref|ZP_03433728.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|289746526|ref|ZP_06505904.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|289758852|ref|ZP_06518230.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|294994186|ref|ZP_06799877.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 210]
 gi|298526193|ref|ZP_07013602.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|289687054|gb|EFD54542.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987]
 gi|289714416|gb|EFD78428.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85]
 gi|298495987|gb|EFI31281.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|326904339|gb|EGE51272.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis W-148]
          Length = 386

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGITTRAVKHGDH-YMLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|118466132|ref|YP_881782.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254819998|ref|ZP_05224999.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
 gi|118167419|gb|ABK68316.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 384

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 134/373 (35%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+  AW   ++R    G+        +          ++         +     M     
Sbjct: 36  EYPEAWIEQMKR---IGIFGLAVPEEYGGSPVSMPCYVKVTEELARGWMSLAGAMGGHTV 92

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T    + + P++ S E   T             + LTE  GG+D+ A+T+ 
Sbjct: 93  VAKLISLYGTEEQKQKYLPRMASGEMRAT-------------MALTEPGGGSDLQAMTTT 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRL 275
            +   + +       W  ++  S    +L + + +       +  +L +    GL   R 
Sbjct: 140 ARAEGNELVINGAKTWISNARRSGLIALLCKTDPQAQPRHKGISIVLVEHG-QGLTVSRD 198

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F          L      G  + MK L    +  A  ++     +
Sbjct: 199 LPKLGYKGVESCELSFDECRVPAAAILGDEPGRGFAQMMKGLETGRIQVASRALGVASAA 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA 
Sbjct: 259 LEDALKYAQERESFGQPIWKHQSVGNYLADMATKLTAARQLTRYAAEKYDSGERCDMEAG 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 319 MA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 371

Query: 452 LDVLNLLEKGTNL 464
             +   L     L
Sbjct: 372 NVIAAQLVSRGKL 384


>gi|313675783|ref|YP_004053779.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312942481|gb|ADR21671.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 600

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 138/390 (35%), Gaps = 40/390 (10%)

Query: 92  ERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           +  D V+ +P     LL +S   GL  +     +E         +  A +       A  
Sbjct: 55  DEIDDVKGNPELMPQLLDKSGELGLLGTSVPEEYEGFGMNFNTSMLVAEVIGAGHSFAVA 114

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L + +      +         K + PK+ S E+                  LTE   G+D
Sbjct: 115 LSAHTGIGTLPILYYGDDAQKKKYLPKLASGEWK-------------ASYCLTEPDSGSD 161

Query: 211 IAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             A  ++     D           W  +   +D FI+ A+++       +   + +    
Sbjct: 162 ANAAKTKAVLTEDKKHYIVNGQKMWITNGGFADVFIVFAKIDDDK---NLSAFIVEKDFG 218

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM---- 323
           G+     + K+G + ++T ++ F++    +    N+ +      KI +  L+   +    
Sbjct: 219 GVTMNEEEAKMGIKGSSTRQVFFNDCKVPV---ENLLSERENGFKIAVNILNIGRIKLGA 275

Query: 324 -SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   +  L +A  YA  R   G  +     ++  IA++A    AA + ++R   + D+
Sbjct: 276 SAIGASKAVLGQAAQYANERKQFGTSIGSFGAIQHKIAEMAARTYAAESAAYRAGQNIDD 335

Query: 383 AKSRSEEAAY------------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A                       I   I K    ++   V  E ++  GG G+  +  +
Sbjct: 336 AYEDLVAGGMEEAEAKLKSVEEFAIECAIIKVHASEVLDYVADEGVQVYGGMGFSADAPM 395

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R YR++  N I  G+     +  +++L K
Sbjct: 396 DRAYRDARINRIFEGTNEINRMLTIDMLLK 425


>gi|296411261|ref|XP_002835352.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629130|emb|CAZ79509.1| unnamed protein product [Tuber melanosporum]
          Length = 433

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 135/377 (35%), Gaps = 32/377 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLM 152
            D+    P    + R+    G      ++ +  + +  QAH +    L   +        
Sbjct: 72  VDRANEFPE--PMWRKLGEAGFLGITAEKDYGGLELGYQAHCVVMEELSRASGSIGLSYA 129

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + S    + + L       +   P + S E                 L ++E   G+D+ 
Sbjct: 130 AHSQLCVNQLTLNGRAEQKERLLPALISGE-------------KVGALAMSEHSAGSDVV 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLS------SPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           ++    + +  G        W  +       P +D  ++ A+ +   G   +  L+ +  
Sbjct: 177 SMKCHAKAVDGGWVLNGTKMWITNARIAIHGPDADVVVVYAKTDPEKGSKGITALILEKG 236

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G R + T EL F + F      L   N     + +   L  L  +  
Sbjct: 237 MEGYTCARKLDKLGMRGSNTGELIFDDVFVPHANQLGPTNRGVRVLMEGLDLERLVLSAG 296

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M+ +L   + Y  +R   G  +    +++  +AD+   ++AA A +F  A   DE 
Sbjct: 297 PLGLMQAALDITLPYVHQRKQFGIPIAHNQLIQAKLADMHTKLSAARAYTFAAARRVDEG 356

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              +++ A A         +    A     +A++C+GG+GY+ E    R  R++    I 
Sbjct: 357 VIDTKDCAGA-------ILFAADRATECALDAIQCMGGNGYVNEVPAGRLLRDAKLYEIG 409

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     + +     K
Sbjct: 410 AGTTQIRHIVIGRAFNK 426


>gi|134103462|ref|YP_001109123.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005996|ref|ZP_06563969.1| butyryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133916085|emb|CAM06198.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 383

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 132/376 (35%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AG 149
           G+ +++ EF    + L+      GL        +  +         A           A 
Sbjct: 30  GDYYEREEFP---YPLVATMGRMGLFGLPVSEEYGGMGGDYFALCLALEELARVDSSVAI 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  +    +    + W PK+ + E                  GLTE  GG+
Sbjct: 87  TLEAGVSLGAMPIYRFGSEEQKRTWLPKLATGE-------------ALGAFGLTEPGGGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDG 265
           D  A  +      D  + ++G K F+++  +D   F+ +  V G    G   +  ++   
Sbjct: 134 DAGATRTTAVLDGDE-WVINGSKAFITNSGTDITSFVTVTAVTGHKPDGGKEISTIIVPS 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAI 322
              G    +  +K+G  ++ T EL F +        L     G  + + IL    +  A 
Sbjct: 193 GTPGFTVAKKYSKVGWNASDTHELSFDDCRVPAANLLGERGRGYAQFLSILTEGRVAIAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + V   +  + E + YA  R   G  + +   ++  IAD+ +    A    +  A     
Sbjct: 253 LGVGLAQGCVDECLRYAGEREAFGHKIGEYQAIQFKIADMEMRAHTARLAYYDAAARMLR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   ++AA       I K      A     +A +  GG G++ E  +AR YR++    I
Sbjct: 313 GEPYRKQAA-------IAKLVSSNAAMDNARDATQIFGGYGFMNETPVARFYRDAKILEI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTSEVQRMLIAREL 381


>gi|85858066|ref|YP_460268.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721157|gb|ABC76100.1| acyl-CoA dehydrogenase, medium-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 384

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 128/359 (35%), Gaps = 24/359 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +       GL    +   +                    A      L+      +  + 
Sbjct: 41  EIYDLLWDLGLMTVTYPPEYGGSETNPGTLLCIGCEEIAKACASTALLLIIQAVGSFPLM 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 +    AP+I +                  G  ++E   G+D+ AI ++  K  +
Sbjct: 101 HGGRKELLDRIAPRIVNN-------------RELAGYLVSEPGAGSDVKAIRTKAVKDGN 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  + P++  +  L + +   G       L + +  GL   ++++K+G R 
Sbjct: 148 DWVINGTKCWATNGPIASFYSCLCRTKDDKGVQGYSFFLVERNTPGLSVGKIEHKMGMRG 207

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+   +       LLG+LN           +     A  ++     + A+   Y+R
Sbjct: 208 SQTSEVILEDVRVPAENLLGELNNGFKLAMKDFDMSRPAIAAQALGISEGAFAQMETYSR 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R+  G  L +  ++ + IAD A  I A   L ++ A+ +D+ K  ++       +A + 
Sbjct: 268 ERYTFGKPLCEHGMITQIIADSAALIEAGRGLIYQAADLYDKGKKNTK-------LASMA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           K++    A  +  +A++  GG GY  +  + R +R++    I  G+     + V   + 
Sbjct: 321 KFFMGDAAVKITTDAIQVFGGYGYTHDYPVERMFRDAKLTQIFEGANQIQRIVVAREIR 379


>gi|284990021|ref|YP_003408575.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284063266|gb|ADB74204.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 384

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 132/365 (36%), Gaps = 29/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
           A++R+    GL    +   +            A           A  L +     A  + 
Sbjct: 41  AIVRQMGELGLFGLPFPEEYGGSGGTYFTLCVALEELARVDSSVAITLEAGVSLGAMPIY 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P++ S E                  GLTE  GG+D  A  +   ++ D
Sbjct: 101 RFGTEEQKQQWLPRLCSGE-------------ALAAFGLTEPGGGSDAGATRTTA-RLED 146

Query: 224 GIYCLSGHKWFLSSPMSDA---FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G + ++G K F+++  +D      + A    R  G   +  +       G    +  +K+
Sbjct: 147 GSWVVNGSKAFITNSGTDLTELVTVTAVTGTRPDGGKEISAIAIPSGTPGFSVGKRYSKV 206

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAI 336
           G  ++ T EL FS+        +     G  + + IL    +  + ++V   +  + E++
Sbjct: 207 GWNASDTRELSFSDCRVPAENLVGERGRGYAQFLSILGEGRIAISALAVGLAQGCVDESV 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA +R   G  +     ++  IAD+ +  + A    +R A      +    E       
Sbjct: 267 KYAAQREAFGQPIGRNQAIQFMIADMEVRASTARLAYYRAAEKMLRGEPYGRE------- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +  ++A      A +  GG G++ E  + R YR++    I  G+     + +  
Sbjct: 320 ASVAKLYSSEVAMDNARYATQVHGGYGFMNEFPVGRFYRDAKILEIGEGTSEVQRMLIAR 379

Query: 457 LLEKG 461
            L  G
Sbjct: 380 DLGVG 384


>gi|111024936|ref|YP_707356.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|40787248|gb|AAR90165.1| putative acyl-CoA dehydrogenase [Rhodococcus sp. DK17]
 gi|110823915|gb|ABG99198.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 372

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 129/371 (34%), Gaps = 28/371 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D  E  P+          + L       S          ++ A      +   +
Sbjct: 22  PHAADVDDKERFPS--ESWAALCSNDLPGLAHPESLGGSGADLLSQVIAVEEVAASCASS 79

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  +    S V    +  + +   P + S              S      +TE R G
Sbjct: 80  ALVMLVNWAGTSTVLSQGSNELKQLVVPGVASG-------------SAGAAWCMTEPRVG 126

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++AI +   +           ++  ++P +D + +LA+  G     +    +     +
Sbjct: 127 SDLSAIATTAVQDGSDWILNGQKRFISNAPWADWYAVLAKT-GDKSLGV---FIVHKDDD 182

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSV 325
           G+ +   + K+G R + T ++         +  +N        +     +     A  ++
Sbjct: 183 GVSFGAPEKKMGMRGSPTADVVLDGCRLPAVRVVNDPYRGFRYISAELNVSRALIAAQAL 242

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +   A+ Y   R   G  +    +++  +AD+A+ I +A +L +   +   +   
Sbjct: 243 GIAQGAFDAAVSYTTNRDQFGQPISRFQLLRGMVADMAVKIESARSLLYDAVHLIQDGDP 302

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               AA A+    + K  C   A +V  +A++  GG GY+ +  + R  R++    I  G
Sbjct: 303 ----AARAK--VAMAKLLCSDNAMSVATDALQLHGGYGYVRDYPVERMMRDAKITQIYEG 356

Query: 446 SGNAMVLDVLN 456
           +     L +  
Sbjct: 357 TNQIQRLLIAK 367


>gi|289742859|gb|ADD20177.1| very-long-chain acyl-CoA dehydrogenase [Glossina morsitans
           morsitans]
          Length = 625

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 82/414 (19%), Positives = 164/414 (39%), Gaps = 54/414 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L   P     + P   S E             V     LTE   G+D  +I  +  K 
Sbjct: 160 ILLYGNPEQKAKYLPA-VSTE------------KVYAAFALTEPSAGSDAGSIKCKAVKS 206

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQ 273
           SDG  Y L+G K ++S+  ++D   + A+ E      G      V   + + S  G+   
Sbjct: 207 SDGKHYVLNGSKIWISNGGIADIMTVFAKTEVQDKKTGEKKEK-VTAFIVERSFGGVTNG 265

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG----- 327
             + K+G +++ T E+ F +         NV     +  K+ +  L++    +       
Sbjct: 266 PPEKKMGIKASNTAEVYFEDVKVPA---ENVLGEEGDGFKVAMNILNNGRFGMGATLAGT 322

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSR 386
           M+  + +A+ +A  R   G  L +   ++  IA + +   A  +++F ++ + D   +  
Sbjct: 323 MKHCITKAVDHANNRLQFGKRLNEYIGIQEKIAQMNMLQYATESMAFSISQNMDAGSQDY 382

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EAA       I+K +  + A  V  E+++ +GG G++++  + R  R+     I  G+
Sbjct: 383 HLEAA-------ISKIFASESAWQVCDESIQILGGMGFMKDTGLERVMRDLRIFRIFEGT 435

Query: 447 GNAMVLDV-LNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSIS---------L 493
            + + L V L  ++   +  ++L +  +    +LG   K+       S+          +
Sbjct: 436 NDILRLFVALTGIQYAGSHLKELQNAFKHPTANLGLIFKEASRRAASSVGIGGTDLSPYV 495

Query: 494 CKEDKGLARFLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             E +   +   E I L      + L + G   I +  + NR  D+    + M+
Sbjct: 496 ATELQLHGKLAGECIDLFGKTVESLLIKYGKGIIGEQCILNRLADSAIDIYAMI 549


>gi|281354503|gb|EFB30087.1| hypothetical protein PANDA_011372 [Ailuropoda melanoleuca]
          Length = 405

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 124/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + +H  W         L  ++   GL           V                +     
Sbjct: 48  IPYHAEWEKAGEVSRDLWEKAGKQGLLGVNIAERHGGVGGDLYSTAITWEEQAYSNCSGP 107

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    K + P++ S +                 L +TE   G+
Sbjct: 108 GFSLHSDIVMPYIVNYGSEEQIKRFIPQMTSGKC-------------IGALAMTEPGAGS 154

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+++   SD  I++A    E       +   L +  
Sbjct: 155 DVQGIRTNAKKDGSD-WILNGSKVFITNGWLSDVLIVVAVTNHEAHSPAHGISLFLVESG 213

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 214 MKGFIKGQKLQKMGLKTQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADL 273

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y + R   G  +     ++  +A++   I    A         D  
Sbjct: 274 AISASEFMFEETRNYVKERKAFGKTIAHMQTVRHKLAELKTQICVTRAFV-------DSC 326

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E+       A + KYW  ++   V  + ++  GG GY+ E  IA+ Y ++ A  I 
Sbjct: 327 LQLHEKKRLDSATASMAKYWASELQNRVAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIY 386

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 387 GGTNEIMKELIARDI 401


>gi|325928316|ref|ZP_08189516.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325541327|gb|EGD12869.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 423

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 53  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVEYGGA 103

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 104 GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 160

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 161 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 210

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 211 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 270

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 271 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 328

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 329 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 381

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 382 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 417


>gi|226954212|ref|ZP_03824676.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC
           27244]
 gi|226835044|gb|EEH67427.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC
           27244]
          Length = 382

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 136/380 (35%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+W++    P   ++      +G  C      +        + +        A
Sbjct: 22  EHIAPHYEQWEREGLMP--RSVWNLLGENGFLCVDVPEEYGGYGVPTHYSLMLVEESARA 79

Query: 145 --QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                +  +   S  +A  +  + T    + W PK+ S E                 +G+
Sbjct: 80  GYCALSTAISCHSEIAAPYIQHIGTEEQKQYWLPKMVSGE-------------AVGAIGM 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ A+ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 127 TEPGAGSDLQAMRTSAILQDDH-YLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLL 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDS 320
           L D   +G       +KIG  S  T EL F N        L N  +G    M+ L    +
Sbjct: 186 LVDTHLDGFKKGTNLDKIGLHSQDTSELFFDNVKVPKDQLLGNAGSGFAYLMQELPRERT 245

Query: 321 AIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           AI   ++  +R S+  A  Y + R   G  +      +  +A   +D  A  A   +   
Sbjct: 246 AIASTALGAIRGSIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVE 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + + K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 306 LYMQGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 358

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 359 IQRIYGGTNEIMKEIVARGL 378


>gi|85375446|ref|YP_459508.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis
           HTCC2594]
 gi|84788529|gb|ABC64711.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis
           HTCC2594]
          Length = 569

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 95/502 (18%), Positives = 177/502 (35%), Gaps = 65/502 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
               A  P +V   +E +G++     A  L R+ +    +L      G     V     +
Sbjct: 17  ERFAAAEPDMVEAIVEGVGQFAAGEFA-PLNRVGDLEGAKLE----NGV----VRLPNGF 67

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                + +  G +       F                   A +    L   SV +   + 
Sbjct: 68  AEAYDQYVEQGWNAIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSVGAIEAIE 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ S E+  T             + LTE + G+D+ A+ S    I++
Sbjct: 128 HHGSEAQQSRYLPKLVSGEWSGT-------------MNLTEPQAGSDVGALRSTAVPITE 174

Query: 224 G----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
           G     Y + G K +++    +       ++LA+          +  FLVP+        
Sbjct: 175 GEHAGKYRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDAS 234

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G  N L    L++K+G  ++ T  + + +     G L+G  N     +  M     ++ 
Sbjct: 235 LGPRNDLRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINV 294

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATA 371
               V     +  +A+HYAR R  S            +++ P ++R +  +      A A
Sbjct: 295 GNQGVQIGERATQQALHYARDRIQSARAGSPDKSPVAILEHPDVRRMLLRMKALTEGARA 354

Query: 372 LSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           L +  A   D      E A A   I+ P+ K W   +   + +  ++  GG G++EE   
Sbjct: 355 LLYYTAGQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGVQVHGGMGFVEETGA 414

Query: 431 ARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
           A+HYR++    I  G+       L    L  +       L   + +D     K       
Sbjct: 415 AQHYRDARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPK------- 467

Query: 489 DSISLCKEDKGLARFLTEKIAL 510
              +L  +   +AR++ E+ +L
Sbjct: 468 -LFALAGDCAAIARWMREEASL 488


>gi|158314954|ref|YP_001507462.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110359|gb|ABW12556.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 382

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 128/376 (34%), Gaps = 24/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +RWD          +   +   GLH       +     +   + R      + ++ A
Sbjct: 27  PHKDRWDDEGMID--RGVYGSAAQTGLHALAVPEEYGGAGERD-FRYRLVVCEEIGRINA 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                        + L     +   +   + + E             +   L +TE   G
Sbjct: 84  LSFG---------LTLSVQDDLVLAYLADLTNNEQRKRWLPGFASGQLLGALAMTEPGAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSP 267
           +D+  I +  ++  +  + ++G K F+S+ +S   I+LA   +   G       + +   
Sbjct: 135 SDLRGICTSARRDGN-SWVINGQKTFISNGISADLIVLAACTDPDAGSRGFSLFVVERDT 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +KIG     T EL F +       LLG+       +        L    M+
Sbjct: 194 PGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMSHLPRERLGITAMA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R      + Y ++R   G  + D    +  +A +A ++  A         +++E  
Sbjct: 254 IGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAETYVDASVRAYNEGT 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +AA  +        W  ++   VI   ++  GG G++ E  + R + +S   +I  
Sbjct: 314 LSPVDAAKGKW-------WITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSRVQTIYG 366

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   M   +   L +
Sbjct: 367 GTTEIMKDLIGRDLTR 382


>gi|146307993|ref|YP_001188458.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145576194|gb|ABP85726.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 379

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 131/388 (33%), Gaps = 38/388 (9%)

Query: 87  YGPGGERWDK--VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
                   DK  V     W        ++  ++   G     W          +  +   
Sbjct: 14  RDAFAAFLDKEVVPHQEEWEAAGVVDRSVWAKAGEMGFL-LPWADEEYGGAGLKDFRYEQ 72

Query: 138 ARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                +A++     M P  S      +A   +      W P I   E             
Sbjct: 73  IMCEELARINEPGFMVPLHSALCGPYIAEYGSAEQKTRWLPGIIRGE------------- 119

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254
             + + +TE   G+D+A + +      D  + L+G K F+S+   +D  I+ A+ +    
Sbjct: 120 TILAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADLVIVAAKTDPANK 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
             +    L +    G    +   K+G  S  T EL F++        L  + G    +  
Sbjct: 179 HAM-GLFLVERGMAGFERGKKLKKLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYLMN 237

Query: 315 L---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +     L +A  +V+G   +L   I Y R R   G  +      +  +A++   I  A  
Sbjct: 238 MLAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVAQV 297

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + R     ++ K   E       +A   K +  ++   V+ E ++  GG GY+ E  I 
Sbjct: 298 FTDRCVLDHNQKKLTPE-------VAAEAKLFTTELLCKVVDEGVQLHGGWGYMWEYPIC 350

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLE 459
           + Y  +    I  G+   M   +   ++
Sbjct: 351 KMYANARIQRIFAGTSEIMKEIISRGMK 378


>gi|260806450|ref|XP_002598097.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae]
 gi|229283368|gb|EEN54109.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae]
          Length = 385

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 131/388 (33%), Gaps = 36/388 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A    P    Y   G+   +V          +++   GL           +     +   
Sbjct: 26  AEEVAPNHTQYEKDGQVSREVW---------QKAGEQGLLGVPTPEEMGGIGADVLYAAI 76

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
                + +          S      +    TP  H+ + P + +              + 
Sbjct: 77  MWEEQMYSNCSGPGYAMHSDIVMPYIQKYGTPEQHERFMPDMIAG-------------NK 123

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG- 254
              L +TE   G+D+  I +  +K  D  + L+G K F+++  M+D  I++A    +   
Sbjct: 124 IGALAMTEPGAGSDLQGIRTNAKKNGDD-WILNGSKVFITNGWMADVTIVVAITNPQAKS 182

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +   L +    G    R   KIG ++  T EL F +       LLG  N     + 
Sbjct: 183 AAHGISLFLVEEGMEGFKKGRKLEKIGMKAQDTAELFFDDVRLPPSALLGQENRGFVYLM 242

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A M+++       E  +Y + R   G  +     ++  +A+I  DI    
Sbjct: 243 QELPQERLIIADMAIASSEFMFEETRNYVKERKAFGKTVSRLQTIQHKLAEIKTDIVVGR 302

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A   +     ++ +            A + K+W   +   V  + ++  GG GY+ E  I
Sbjct: 303 AFLDQCLELHNQGR-------LDSNTASMAKFWASDLQNRVATQCLQMHGGWGYMWEYPI 355

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           A+ + +S    I  GS   M   +   +
Sbjct: 356 AKAFVDSRVQPIYGGSNEIMKELIARNI 383


>gi|288922120|ref|ZP_06416323.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288346522|gb|EFC80848.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 385

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 139/368 (37%), Gaps = 28/368 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R +   GL       ++  +    + ++R    L            + +  +  ++ 
Sbjct: 37  DLRREAAEMGLFGFAIPETYGGLGLNMSAEVRLVFELGYTTPAFRSMFGTNNGIAGHVLL 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + P + S E+                  LTE+  G+D A + +  ++  D
Sbjct: 97  EGATEEQKKAYLPLVASGEW-------------TASFALTEENAGSDPAGLATSARRDGD 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+ +    G   +   + +    GL      +K+G  
Sbjct: 144 DWVINGAKRFITNAPVADVFMVFARTDPDAKGGRGITAFMVERGTPGLGVGPKDHKMGQA 203

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAI 336
              T ++   +        + G+  V  G    M+ L    +  A + V   +  L E++
Sbjct: 204 GAWTADVTLDDVRVPASTVIGGEDGVGRGYATAMRCLAHGRIHIAALCVGLTQRLLDESV 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G ++ +  +++  +AD A D+ AA AL   +A  FD+           RI 
Sbjct: 264 AYAASRVQGGSVIGEHQLVQGLLADSATDLYAARALVTEVAAGFDDGSDT-------RIG 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               KY+  +    V   A++  GG+GY+    + R YR++    I  G+     + +  
Sbjct: 317 PSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLFRIYEGTSQIQQIVIAR 376

Query: 457 LLEKGTNL 464
            L +   +
Sbjct: 377 QLLRDAGV 384


>gi|170586870|ref|XP_001898202.1| 2-methyl branched-chain enoyl CoA reductase isoform I [Brugia
           malayi]
 gi|158594597|gb|EDP33181.1| 2-methyl branched-chain enoyl CoA reductase isoform I, putative
           [Brugia malayi]
          Length = 760

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 113/320 (35%), Gaps = 33/320 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +M PS+  A  + +       K +                +    +     +TE   G+
Sbjct: 456 CIMGPSLAVAPFI-IAGNEEQKKKYL-------------GMLAAEPIIAAYCVTEPTAGS 501

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGS 266
           D++ I  + +K  D         W      +  F +LA+ +              + DG 
Sbjct: 502 DVSGIKMKAEKKGDSYVLNGTKAWITGGGPAKWFFVLARTDPNPKVQPGKAFTAFIVDGD 561

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G+   R +  +G R + T  + F +    ++   N+   P    K+ +   D    +V
Sbjct: 562 TEGISRGRKEQNMGQRCSDTRTITFEDV---VVPMENILGTPGAGFKVAMEAFDMTRPAV 618

Query: 326 SGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V     +L EA  YA  R   G  +     +   +AD+A ++  A  +++R A + 
Sbjct: 619 AAAAVGLSWRALDEACKYALERKAFGVPIAMNQGISFILADMAANLELARLITYRAAMAV 678

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                     A     A + K +    A      A++  GG+G+ +E  + +  R++   
Sbjct: 679 SN-------KACFSYYASVAKCFAADTANIAATNAVQIFGGNGFSKEYPVEKLMRDAKIY 731

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   + +
Sbjct: 732 QIYEGTSQIQRIVISRYILQ 751



 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 124/367 (33%), Gaps = 35/367 (9%)

Query: 77  ANYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           A+   P    Y   GE  WD          +L+++  +G   +   RS   +       +
Sbjct: 46  ADEVMPVAAKYDKNGEFPWD----------VLKKAHANGFMNTTIPRSCGGLGLDMVTNV 95

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                +          M  ++ + + + L  +  + K +  ++              +  
Sbjct: 96  LIHERFGYGCTGITTAMLANILAETPLILAASSAIKKKYLGRMV-------------EEP 142

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254
           +     +TE   G+D+ A  +  +K  D         W  +  +++ F +L + +     
Sbjct: 143 LMASYAVTESCAGSDVGATQTCCKKKDDKYVINGSKMWITNGGVANWFFVLTRNDNDPKI 202

Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVED 311
                    + D    G+   + +  +G R++ T  + F +        +     G    
Sbjct: 203 PVSKAFTAFVVDADTPGISIGKKEINMGQRASDTRAITFEDVQVPKSQMIGGPGEGFKIA 262

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK         A ++       L EA  YA  R   G  + +   +   +AD+A+++  +
Sbjct: 263 MKTFDTTRPLVAAIATGLAARCLDEACKYALERKTFGTQIANNQGISFMLADMAINVELS 322

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +++R A     A+S       A   + I K +    A    + A++  GG  Y     
Sbjct: 323 RLITYRGAWEVALAQSSP-----ASYYSSIAKCFAADTANIAASNAVQIFGGKNYFWLSD 377

Query: 430 IARHYRE 436
             R YR+
Sbjct: 378 TQRKYRD 384


>gi|304311610|ref|YP_003811208.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797343|emb|CBL45563.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 380

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 142/377 (37%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G+ W++    P     LR+    G    + +  +             A     +    
Sbjct: 27  PNGDAWEQDGSVP--REFLRKMGELGYLGLMHEEKYGGSGMDVRAATILAEELGRSTYAG 84

Query: 149 GHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             +  +  +  ++  +A   +    + + P + S                   + +TE  
Sbjct: 85  VTITALVHTNMASPHLANAGSVAQKQKYLPDVVSG-------------KKITAICVTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLED 264
            G+D+A I ++  +  +  + ++G K F+++ +  D + + A+ + G  G   +   + +
Sbjct: 132 AGSDVAGIKTRAVRDGND-WVINGSKIFITNGVFGDLYFVAAKTDPGAKGSRGISIFIVE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   K G RS+ T EL F N       LLG+ N     V        +  A
Sbjct: 191 KGTPGFSVGRSLKKHGWRSSDTAELFFDNVRVPVENLLGEENKGFYAVMKNFQHERIMLA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M V   + ++   +   ++R   G  L  + V++  +A +   IA A    + +A    
Sbjct: 251 AMGVGEAQKAIEITLDNVKQRQAFGAPLFSKDVVRDNLARMQTKIALAQNYLYYVAWLDA 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +     +E +  +  A       C++A  V+   ++  GG G++ E +I R  R++   +
Sbjct: 311 QGVDCIKEVSMLKANA-------CEIANEVMYGCVQLHGGMGFMMESTIERMSRDARVLT 363

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M  +V   +
Sbjct: 364 IGGGTTEIMYGEVAKRM 380


>gi|17988557|ref|NP_541190.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|265990382|ref|ZP_06102939.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984354|gb|AAL53454.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|263001051|gb|EEZ13741.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 381

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 125/361 (34%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +      ++R    L   +      + + +   +  + 
Sbjct: 40  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVRVGFELGYTSPAFRSVIGTNNGIGSQGII 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 100 ADGTDDQKKYWLPRLASG-------------GIIASFALTEPDVGSDAGAVRTTAERDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 147 SYIINGTKRFITNAPVAGVFTLMAR-MGGSGPSGISAFLAERDLPGLTVGTPDHKMGQRG 205

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 206 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 266 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+     + +   + 
Sbjct: 320 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQIQRIIIAREMI 379

Query: 460 K 460
           +
Sbjct: 380 R 380


>gi|322488322|emb|CBZ23569.1| putative acyl-coenzyme a dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 416

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 66  PVAAEYDRSMKYP--HDVYKQAWELGLTNMHIPTKYGGLGASAVDGLVVQEELAYACSGM 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T   +  +  ++              +  +     +TE  GG
Sbjct: 124 ATAFEGNSLAEAPLLIAGTDAQNAKYLSRMV-------------EEPLLAAYCVTEPTGG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  +++ + +LA+ EG    F+V     D    
Sbjct: 171 SDVAGMKTVAKKEGDKWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-----DADTP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   + +  +G R + T  + F N        +     G    MK         AI +V
Sbjct: 226 GVTLGQKEMMLGQRCSDTRGITFENVVVPQENVVGEAGKGFQVAMKAFDFTRSAVAISAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 286 GLARRATDEATKYARERMTMGKPIAQHQGVAFMLAEMAAGVEACRLMTYRAGWETDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA         +A      A++  GG+GY     + + YR+    SI  G
Sbjct: 346 NTYYASCAKMMA-------SDLAEKCSTNAVQIFGGNGYNAGYPVEKLYRDCKIFSIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 399 TTQIQHTIISRYV 411


>gi|257093920|ref|YP_003167561.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046444|gb|ACV35632.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 597

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 99/519 (19%), Positives = 197/519 (37%), Gaps = 64/519 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPA-WHALLRRSIHDGLHCSIW 120
            ++    +E A+ A      L+      G RW DK    PA +    +     G      
Sbjct: 36  DLVDAVLEEAAKFAEGVLSPLNWSGDQEGARWHDKAVTMPAGFKEAYKLFADSGWTALAA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
           +  +      +   + AA   +         + P +T+ ++ AL    +  +   +  K+
Sbjct: 96  ESEWGGQGLPK--VVSAAVNEMWKSANHSFSLCPLLTAGAIEALVLTGSDALKATYLEKM 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S  +  T             + LTE   G+D+AA+ ++ +  +DG Y + G K F++  
Sbjct: 154 VSGLWTGT-------------MNLTEPSAGSDLAAVRTRAEPQADGSYKIFGQKIFITYG 200

Query: 239 MSDA-----FIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA+          +  F+VP+ L +     G+ N      +++K+G  
Sbjct: 201 EHDMADNIIHLVLARTPTAPEGVKGISLFVVPKFLVNDDGSLGARNDAYCVSIEHKLGIH 260

Query: 283 SNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  + F +     G+L+G+ N     +  M         +  V+    +   A  YA
Sbjct: 261 ASPTAIMAFGDHSGAIGYLVGEENRGLEYMFIMMNAARFGVGLEGVAACERAYQRARDYA 320

Query: 340 RRRHV------SGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------K 384
           R R         GG    +I  P ++R +  +     A  AL++ +A + D A      +
Sbjct: 321 RDRIQCTDIGVRGGPKVAIIQHPDVRRMLMTMKSYAEATRALAYVVAAAHDAAVHHADAE 380

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +R    A+  +M P+ K W  +    + +  ++  GG GY+EE   A+H R++  ++I  
Sbjct: 381 TRKRNQAFVDLMIPVVKGWSTESGVTIASIGVQVHGGMGYVEETGAAQHLRDAQISTIYE 440

Query: 445 GSGNAMV--LDVLNLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           G+       L    +  +G    +    +   L+ DL   G      +R  ++   +   
Sbjct: 441 GTTGIQANDLIGRKMAREGGATLKSVIAMMRALDSDLAKQGGAHFAAIRSRLAAGVDALA 500

Query: 500 LARFLT-----EKIALASSAAALYRAGMNDIADVFLENR 533
            A         + +  AS+ A  +   +  +A  +   R
Sbjct: 501 TAGEWVVATYGKDVRAASAGAVPFLKLLGIVAGGWQMAR 539


>gi|123235921|emb|CAM15108.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 426

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 130/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 52  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 102

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                        +  +      V +       K +  ++        
Sbjct: 103 MGLGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDAQRKKYLGRMT------- 155

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K  D         W  +   ++ + +L
Sbjct: 156 ------EEPLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLL 209

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 210 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 266

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 267 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 326

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 327 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 379

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 380 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 418


>gi|116330037|ref|YP_799755.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123726|gb|ABJ74997.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 586

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/492 (19%), Positives = 185/492 (37%), Gaps = 71/492 (14%)

Query: 47  IANFPSVVHKE-------LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--DKV 97
           +A  PS V +        LE LGE +    A           P+       G ++   KV
Sbjct: 48  LAYAPSNVEEAKEYYKSVLESLGEIMGEFVA-----------PRSKEMDQIGLKYANGKV 96

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSV 156
            F  A           GL      R +  V       +++  + + A+ +A   L   ++
Sbjct: 97  TFPTAQEECYNTLRDAGLMPISISRKYGGVGLPA--TVQSLMMEIAARADAAFCLAYGNI 154

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
               ++    +  + + W P+I + +Y             +  + LTE   G+D+  + +
Sbjct: 155 NIVEIMERYASSEMCEKWLPEISAGKY-------------SAAMALTEPNYGSDLPNVQT 201

Query: 217 QGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
           +  + ++G++ ++G K F++            + LA+      G   +   L  G  N +
Sbjct: 202 RATQDTNGVWRVNGAKRFITHACGYIGAPSVILTLARTGSLESGARGLSFFLVKG--NDV 259

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMR 329
               +++K+G   + T E+ F N+ G L+G            M     L  A  S+    
Sbjct: 260 HIAGVEHKMGLHCSPTCEVVFDNSPGELIGKTGYGLVKYSMGMMNAARLTIATQSLGIAT 319

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------- 381
            +  E   YA  R   G  +   P +++ +  +  +I A   L      + D        
Sbjct: 320 AAYYEGKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIVETGKAIDLYHWPKER 379

Query: 382 -------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                        + ++       A +  P++KY+  +   A+ ++A++  GGSGY E+ 
Sbjct: 380 LIKAEGKSERDVSQDETIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDY 439

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-----GSSGKKV 483
            +AR YR+S   +I  G+    ++  +  +  G +   QL    E++L         KKV
Sbjct: 440 DVARIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYAEEELSKFSPSEDLKKV 499

Query: 484 ITILRDSISLCK 495
            + L  S+ L K
Sbjct: 500 WSDLNTSVGLYK 511


>gi|149027884|gb|EDL83344.1| rCG22781, isoform CRA_b [Rattus norvegicus]
          Length = 395

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 132/361 (36%), Gaps = 27/361 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 58  PNMAEWDQKELFPV--DVMRKAAQLGFGGIYVRTDVGGSGLSRLDTSVIFEALATGCTST 115

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 116 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 163 SDAASLLTSAKRQGDH-YILNGSKAFISGGGESDIYVVMCRT-GGSGPKGISCIVVEKGT 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S
Sbjct: 221 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCS 280

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     + + R   G  L     ++  +AD+A  + A+  +    A +     
Sbjct: 281 LGAAHASVVLTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVAL---- 336

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +  +    +  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 337 --QEEREDAVALCSMAKLFVTEECFTICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILE 394

Query: 445 G 445
           G
Sbjct: 395 G 395


>gi|257095859|ref|YP_003169500.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048383|gb|ACV37571.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 387

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 130/374 (34%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  E  D+    P    L  +    GL     +  +  +     AH +    L   +   
Sbjct: 31  PRAEAIDRDNLFPG--DLWGKLGSLGLLGITAEEEYGGIGLGYLAHIVAMEELSRASASV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    T      + PK+ S E+                L ++E   
Sbjct: 89  ALSYGAHSNLCVNQIRRNGTTAQKARYLPKLISGEH-------------VGALAMSEANA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+  +    ++  D         W  +   +D  ++ A+ +       +   + +   
Sbjct: 136 GSDVVGMKLAAERKGDRFILNGSKMWITNGGDADTLVVYAKTDIHAAAKGITAFIVEKGM 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G       +K+G R + T  L F +        L    G    +   +  + A+++   
Sbjct: 196 PGFSCGAKLDKLGMRGSNTYPLFFDDCEVPAENVLGQVDGGARVLMSGLDYERAVLAGGP 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M  ++   + Y   R   G  + +  +M+  IAD+        +  + +  + D  +
Sbjct: 256 LGIMAAAMDLVLPYIHDRRQFGQAIGEFQLMQGKIADMYTTFNVCRSYVYAVGEACDRGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +  ++AA A         +  + A  +  EA++ +GG+GYI E    R +R++    I  
Sbjct: 316 TTRKDAAGA-------ILYAAEKATWMAGEAIQALGGNGYINEYPAGRLWRDAKLYEIGA 368

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 369 GTSEIRRMLIGREL 382


>gi|229489108|ref|ZP_04382974.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324612|gb|EEN90367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 383

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 135/373 (36%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +           +  +      +     M     
Sbjct: 35  EYPEKWIDQMK---QIGIYGLAIPEEYGGSPVSMPCYAQVTQELSRGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T      + P++ + E   T             + LTE  GG+D+ A+T+ 
Sbjct: 92  VAKLISLFGTEEQKVKYLPRMATGEIRAT-------------MALTEPGGGSDLQAMTTN 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +     +       W  ++  S    +L + +         +  +L +    GL   R 
Sbjct: 139 AKSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIVLVEHG-EGLTVSRD 197

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 198 LPKLGYKGVESCELSFDNYRISESAILGGTPGKGFGQMMKGLETGRIQVACRALGVATAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D  +    EA 
Sbjct: 258 LEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDSGERCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLYASEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLLEKGTNL 464
             +++ L     L
Sbjct: 371 NVIVSQLVARGGL 383


>gi|324508921|gb|ADY43761.1| Very long-chain specific acyl-CoA dehydrogenase [Ascaris suum]
          Length = 620

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 90/468 (19%), Positives = 170/468 (36%), Gaps = 51/468 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MV 162
             LL +    G   ++    FE          R A +     L    +M    +     +
Sbjct: 105 KELLMKFSELGAFGALVPEQFEGAGLNNVQMARLAEVVGANDLSLAVVMGAHQSIGYKGI 164

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    K + P + +                     LTE   G+D  +I S+  K +
Sbjct: 165 LLYGTDEQKKKYLPDLATGRRF-------------AAFCLTEASSGSDANSIRSRADKTA 211

Query: 223 DGIY--CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           DG Y     G  W  ++  +D F + AQ     E  +    V   + + S  G+ +   +
Sbjct: 212 DGKYYILNGGKLWISNAGFADVFTVFAQTPVQGEDGITKDKVSAFIVERSHGGVTHGPPE 271

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV-----SGMRV 330
            K+G + + T E+ F NT   +    N+     E  K+ +  L++    +       M+ 
Sbjct: 272 KKMGIKGSNTAEINFENTKVPV---ENLLGKEGEGFKVAMNILNNGRFGIPAACTGSMKW 328

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEE 389
            + + + +   R   G  L D   ++  + D+     A  ++ + LA++ D+  +    E
Sbjct: 329 CIKKTVDHITERTQFGKKLKDFGNVQEQLVDMITRHYATESILYMLASNMDKGVQDYQLE 388

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA  ++MA        + A  V   A++  GG GY++E  + R  R+     I  G+ + 
Sbjct: 389 AAIGKVMA-------SENAWRVCDAAIQLHGGMGYMKECGLERVLRDLRIFRIFEGANDV 441

Query: 450 MVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL-RDSISLCKEDKGLARFLTE 506
           + L +    L   G++L          ++ S   +V+  + R++    +    +   L E
Sbjct: 442 LRLFIALTGLQFAGSHLQHAAKEIKSGNVSSLIGEVMRRISRNTGGDFETI--VHPSLRE 499

Query: 507 KIALASSAA---------ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             ALA+ A           L +     I   +   R  D     + M+
Sbjct: 500 SAALANKAVKEFGKMTEGLLLKHKKGIIDRQWELIRVADAAIDIYSMV 547


>gi|312199133|ref|YP_004019194.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230469|gb|ADP83324.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 386

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 35/380 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLE 147
           P    W + E+ PA   L  +    G+   + D  +        + + A      A Q  
Sbjct: 26  PYAADWSEREYFPA--ELFGKLADLGVMGMLIDEEYGGTNAGYVNYVAAMEAIGGADQSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S  ++  +A   TP   K W               P+         GLTE   
Sbjct: 84  AAAWNAHSTIASLPLAAFGTPEQKKRWLE-------------PLATGRKLGAFGLTEPTA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQV---EGRVGCFLVPRL 261
           G+D A+I +Q ++  +G + ++G K F+++   P+S    +LA     +     +     
Sbjct: 131 GSDAASIRTQARRD-NGGWLINGTKMFITNAGTPISLGVTILAVTGVSDDGKKRYG-TFF 188

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + DG   G        K+G  +  T EL F + +     L+G+         ++     +
Sbjct: 189 IPDG-TPGYEKGNALRKLGWHAMDTRELVFRDCWIPDDHLIGEEGNGLRQFLEVLDGGRI 247

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A + +S  + +L  A+ +A  R   G  L     +   +AD+A +I A  AL +R A 
Sbjct: 248 SVAALGLSLAQTALDLALRHANEREQFGSKLSRFQAIGHKLADMATEIEAGRALVYRAAW 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+ +  S+EAA A       K +  ++A    + +++  GG GY+ E +I+R Y ++ 
Sbjct: 308 LGDQGRPFSKEAAMA-------KLYTSELANRAASASVQIHGGYGYVRESAISRFYADAK 360

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+       +  ++
Sbjct: 361 VLEIGEGTSEIQRNVIARMI 380


>gi|322368929|ref|ZP_08043496.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
 gi|320551660|gb|EFW93307.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus
           DX253]
          Length = 380

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 138/377 (36%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  +     PA   +        +        +  +   Q  + + A  L  ++   
Sbjct: 26  PIAQEIETEHRFPA--EIFDELAALDMMGVPVSEEYGGLGGDQLMYALVAEELGRVSGSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +    ++  + +  T    + W   +   EY                  LTE   
Sbjct: 84  GLSYAAHISLASKPIEMFGTEEQKERWLTPLAEGEY-------------LGSWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           G+D + + +  +K  D        ++  ++ ++ + ++ A  +   G   +   + D   
Sbjct: 131 GSDASDMDTTAEKDGDEWVINGTKQFITNASVAGSVLVKAVTDSDAGYGGISTFIVDPEE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            +G     + +K+G  ++ T E++F++        L       E  K    LD   +S++
Sbjct: 191 DDGFEVTTVWDKMGLNASPTCEIQFTDCRVPEDRLLGEEGDGWEQTK--KTLDGGRISIA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +   +A+     A  Y++ R   G  +     ++  I D+   I  +  L+ + A  +D
Sbjct: 249 ALSTGIAQGAYEAAHEYSQEREQFGKPISKFDAIRNKIVDMDRKIERSRLLTHKAACKYD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E  S S E+A A++ A        + A  V  +A++ +GG GY E+ +  R  R++    
Sbjct: 309 EGYSVSHESALAKLDA-------SESARKVSEDAVQVLGGYGYTEDFAPQRFLRDAKLME 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 362 IGEGTSEIQHLVIGREL 378


>gi|302529952|ref|ZP_07282294.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302438847|gb|EFL10663.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 385

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 135/377 (35%), Gaps = 32/377 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLM 152
           ++K EF    + L+ +    GL    +   F  +         A           A  L 
Sbjct: 33  YEKEEFP---YELVAKMGEMGLFGLPFPEEFGGMGGDYFALCLALEELARVDSSVAITLE 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     A  +    T    + W P + + E                G GLTE  GG+D  
Sbjct: 90  AGVSLGAMPIYRFGTQEQKETWLPMLTTAE-------------ALGGFGLTEPGGGSDAG 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVE-GRVGCFLVPRLLEDGSPN 268
           A  ++ +   D  + ++G K F+++  +D      + A  +    G   +  ++      
Sbjct: 137 ATRTRARLDGDE-WVINGSKAFITNSGTDITKLVTVTAVTDVMENGRKEISAIIVPSGTP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G       +K+G   + T EL FS+        +     G  + + IL    +  A +SV
Sbjct: 196 GFTVAPKYSKVGWNCSDTHELSFSDVRVPAENLVGKRGRGYAQFLSILDEGRVAIAALSV 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  + E + YA+ R   G  + +   ++  IAD+ +    A    ++ A+     + 
Sbjct: 256 GLAQGCVDECLKYAKDRVAFGHRIGEYQAIQFKIADMEVRAHTARLAYYQAASKMLRGEP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +E       A I K      A     +A +  GG G++ E  ++R YR++    I  G
Sbjct: 316 FKKE-------ASIAKLVASNAAMDNARDATQIFGGYGFMNEFPVSRFYRDAKILEIGEG 368

Query: 446 SGNAMVLDVLNLLEKGT 462
           +     + +   L  G 
Sbjct: 369 TSEVQKMLIARHLGVGA 385


>gi|226365563|ref|YP_002783346.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244053|dbj|BAH54401.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 140/401 (34%), Gaps = 42/401 (10%)

Query: 68  CTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              Q+LA+       N   P    +             P  + ++      GL    +  
Sbjct: 12  DEYQQLAKTVADFAKNVVAPVAAEHDAN-------HTFP--YEVVSGMADMGLFGLPFPE 62

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  +    L  + Q  A  L +     A  +         ++W P++ S 
Sbjct: 63  EYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKQEWLPQLTSG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D     +  +  S G + ++G+K F+++  +D
Sbjct: 123 -------------KSLAAFGLTEPGAGSDAGGTKTTAKFDS-GEWIINGNKQFITNSGTD 168

Query: 242 A---FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                 + A    + G   +  +L   S  G   +   NK+G  ++ T  L FS+     
Sbjct: 169 ITKLVTVTAVTGTKDGKKEISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFSDVRVPE 228

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G    ++IL    +  A +SV   +  + E++ YA+ R   G  +     +
Sbjct: 229 ENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFGRPIGHNQAI 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              IA +      A    +  A      K   ++AA       I K    + A     +A
Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAA-------IAKLVASEAAMDNARDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG G++ E ++ARHYR+S    I  G+    ++ +  
Sbjct: 342 TQIHGGYGFMNEYTVARHYRDSKILEIGEGTTEVQLMLIAR 382


>gi|149204214|ref|ZP_01881182.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149142656|gb|EDM30701.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 572

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 89/462 (19%), Positives = 165/462 (35%), Gaps = 43/462 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYG---PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
            + +    E AR+       L   G   P       V   P +    R     G      
Sbjct: 35  DMTAAILSEAARLCEEVLYPLQRSGDLHPAKLENGVVRTSPGYADGYRAIADGGWVSISA 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +            +   A L        +      +    +  +   + PK+ S
Sbjct: 95  HPDHGGMGLPMTVTTAVNEMMSSACLSLQLNPLMTQGQIEALEHHASDHLKATYLPKLVS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + G+D+ A+ S+ + + DG Y ++G K ++S   +
Sbjct: 155 GAWAGT-------------MNLTEPQAGSDVGALRSKAEPMGDGTYAVTGQKIYISWGDN 201

Query: 241 DA-----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FLVP+ + D     G  N L    L++K+G   +
Sbjct: 202 DFTENVCHLVLARLPDGVPGTKGISLFLVPKFIPDENGAPGKQNSLKVVSLEHKMGLHGS 261

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T  +++    G+L+G+ +     +  M     L      +     +   A+ YA  R  
Sbjct: 262 PTAVMQYDGAIGWLVGEAHDGMRAMFTMMNNARLGVGGQGIGVAEGAYQHALAYAMDRKQ 321

Query: 345 SGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI 395
                      +I+   ++R +A +  DI AA A++   A + D   A  +   AA A  
Sbjct: 322 GRTPVQGGSGSIIEHADVRRMLATMKADIFAARAIALACAQAIDMQTATDKPHWAARAAF 381

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV- 454
           + PI K +      AV    ++  GG G+IEE   A++ R+    +I  G+     +D+ 
Sbjct: 382 LTPIAKAFGTDTGIAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDLA 441

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              L  G      L   +E     + +  +  L + +    E
Sbjct: 442 ARKLMDGGEAAYALLDEIEAQ-AEAARASLPELAEPVWQAAE 482


>gi|288924510|ref|ZP_06418468.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288344143|gb|EFC78714.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 257

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 101/266 (37%), Gaps = 17/266 (6%)

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRL 261
           E+  G+D A++ ++ +   D         W  ++  S  + ++A  +         +   
Sbjct: 1   EREAGSDTASMRTRARLDGDHWVLNGTKTWITNAGESTWYTVMAVTDPDAAKPADGISAF 60

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           +      G      + K+G + + T E+ F N          +   P   ++  +  LD 
Sbjct: 61  VVRADDPGFEVGSKERKLGIKGSPTREIHFVNCTIPAD---RIIGEPGTGLRTALRTLDH 117

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
              ++    V +A+     AI Y + R   G  + D   ++  +AD+A+ I AA  + + 
Sbjct: 118 TRPTIGAQAVGIAQGALDAAIGYVKERRQFGRPIADNQGVQFMLADMAMKIEAARHMVYV 177

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +           +    K +   +A  V  +A++  GG+GY  +  + R  R
Sbjct: 178 AAARAERGEPN------LGFITAAAKCFASDVAMEVTTDAVQLFGGAGYTRDFPVERMMR 231

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461
           ++    I  G+     + +   L +G
Sbjct: 232 DAKITQIYEGTNQIQRMVMSRALLRG 257


>gi|47085823|ref|NP_998254.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
           1 [Danio rerio]
 gi|42542450|gb|AAH66533.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 130/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 50  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                        +  +      V +       K +  ++        
Sbjct: 101 MGLGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDVQRKKYLGRMT------- 153

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I ++  K  D         W  +   ++ + +L
Sbjct: 154 ------EEPLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLL 207

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 208 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 264

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 265 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 325 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 378 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 416


>gi|258651208|ref|YP_003200364.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554433|gb|ACV77375.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 390

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 131/378 (34%), Gaps = 33/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R +  E  P    + R     GL    +        +     ++            
Sbjct: 29  PRAARDEAAEQFP--RDVFRMLGQTGLLGLPYPEEVGGGGQPYEVYLQVLEEVGAVWASV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  MS  V S   +A   T      W P + +               +     L+E + G
Sbjct: 87  GVGMSVHVLSCFPLAHYGTDAQRAQWLPDLLAG-------------DLLGAYCLSEAQAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ +  ++  D         W      +D ++++A+         +   L      
Sbjct: 134 SDPAALRTTARRDGDEYVLNGAKAWTTHGGHADFYLVMARTSDERT--GISSFLVPADTA 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327
           GL     + K+G   +AT  +        +           E ++I L  LDS  + ++ 
Sbjct: 192 GLIADPPERKMGLTGSATATVRLEQARVPV---ERRIGAEGEGLRIALAALDSGRLGIAA 248

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA+     A+ YAR R   G  +ID   +   +AD+   +  A A+    A   D+
Sbjct: 249 VATGLAQGALDRAVAYARERQTFGQAIIDHQGLGFLLADMEAAVQTARAMYLHAARLRDQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S EAA       I K      A  V  +A++ +GGSGY  +  + R+ RE+    I
Sbjct: 309 GLPFSREAA-------IAKLVATDNAMKVTTDAVQVLGGSGYTRDFPVERYMREAKVMQI 361

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 362 FEGTNQIQRLVISRSLRR 379


>gi|171060266|ref|YP_001792615.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170777711|gb|ACB35850.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 593

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 88/483 (18%), Positives = 177/483 (36%), Gaps = 50/483 (10%)

Query: 64  YVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIW 120
            ++    +E  + A     P  +     G RW       A  +          G +    
Sbjct: 36  DLVEAILEEAGKFAAGVLDPINYPGDQQGARWQAGVVTAADGFRQAYASFCETGWNAMPA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              F               ++  A +        ++ +   +A   +  + + + PK+ +
Sbjct: 96  RTEFGGQGLPTLVSTAVLEMWKSANMAFSLCQMLTLGAVEAIAHHGSAVLKQRFLPKMVA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D++A+ S+     D  Y +SG K F++    
Sbjct: 156 GEWTGT-------------MNLTEPQAGSDLSAVRSRAVPEGDH-YRVSGTKIFITWGEH 201

Query: 241 D-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  F+ P+ L +     G+ N L    +++K+G  ++
Sbjct: 202 DLAENIVHLVLARLPEAPAGVKGISLFVCPKFLVNDDGSLGARNDLVCASIEHKLGIHAS 261

Query: 285 ATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F       G+L+G+ +   G +  M     L+  +  V     +   A  YA  
Sbjct: 262 PTAVMSFGEGPGAIGYLVGEPHKGLGYMFTMMNHARLNVGLEGVGISERAYQHARAYALD 321

Query: 342 RHVSG-----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------A 390
           R           +I  P ++R + D+     A  AL++  A   D A + ++        
Sbjct: 322 RVQGRTLTGSKTIIGHPDVRRMLLDMKARTEAMRALAYYAAGQMDRAHAHADADARARSQ 381

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A   ++ P+ K WC + A  + ++ ++  GG G++EE   A++ R++   +I  G+    
Sbjct: 382 ALVELLTPVVKGWCTENALGIASDGVQVHGGMGFVEETGAAQYLRDARITTIYEGTTGIQ 441

Query: 451 V--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LCKEDKGLARFLTEK 507
              L    L  +G      L + +  D    G      L      L    + LA  +   
Sbjct: 442 ANDLIGRKLAREGGVTMRALIAQMRSDADRIGDGPDAQLVALGQPLRGGLQALADAVDWL 501

Query: 508 IAL 510
           +A+
Sbjct: 502 LAV 504


>gi|169629171|ref|YP_001702820.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|23573441|gb|AAN38728.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus]
 gi|169241138|emb|CAM62166.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus]
          Length = 399

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 87/424 (20%), Positives = 153/424 (36%), Gaps = 39/424 (9%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
           S D     ++A   +    E   L +   S   +E+A       P+L         W+ V
Sbjct: 10  SEDGAARFVVAPE-AWTTPERRALSQMARSFVEREIA-------PKL-------AEWEHV 54

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P    L   +   GL    +                     L A           V 
Sbjct: 55  GEIP--RDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGST------GVC 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A     +  P +  + +  +  R   PT         +   LG+TE   G+D+A + ++
Sbjct: 107 AALFTHGIALPHIAANGSDALIERYVRPTL-----AGKMIGSLGVTEPGAGSDVANLRTR 161

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  D  Y ++G K F++S +   F+  A   G  G   V  L+ D +  G    R  +
Sbjct: 162 AVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLD 220

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R + T EL F +       L+G  N     +        L  A+ + +    +L  
Sbjct: 221 KMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDL 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  +AR R   G  L  + +++  +A++A  +  A   +  +   +   +    E + A+
Sbjct: 281 AKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAK 340

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A     +       V+ EA++  GG GY+ E  I RHYR+     I  G+   M   +
Sbjct: 341 NTAVYACDY-------VVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVI 393

Query: 455 LNLL 458
              +
Sbjct: 394 AKRI 397


>gi|118619023|ref|YP_907355.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium ulcerans Agy99]
 gi|118571133|gb|ABL05884.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium ulcerans Agy99]
          Length = 388

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 135/374 (36%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEYGGMGGDYFALALALEELGKVNQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +           W P + +                  G GLTE   G+D  +
Sbjct: 95  GVGLGAMPIYRFGNEEQKSKWLPDLLAG-------------RALAGFGLTEPGAGSDAGS 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNG 269
             +  +    G + ++G K F+++  +D    + +  V G +  G   +  ++      G
Sbjct: 142 TRTTARLDG-GEWVVNGSKQFITNSGTDITSLVTITAVTGSIADGKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              + + NK+G  ++ T  L F +        L +      +   L  LD   ++++ + 
Sbjct: 201 FIVEPVYNKVGWNASDTHPLSFDDARVPEENLLGIRGKGYANF--LSILDEGRIAIAALA 258

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             +A     E++ YA+ R   G  +     +   IA +      A    +  A      K
Sbjct: 259 TGVAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYEAAAKMLAGK 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A+++         + A     +A +  GG G++ E  +ARHYR+S    I  
Sbjct: 319 PFKKEAAIAKMI-------SSEAAMDNARDAAQVHGGYGFMNEYPVARHYRDSKILEIGE 371

Query: 445 GSGNAMVLDVLNLL 458
           G+    ++ +   L
Sbjct: 372 GTTEVQLMLIARSL 385


>gi|89899798|ref|YP_522269.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89344535|gb|ABD68738.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 382

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 137/361 (37%), Gaps = 28/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H + R++   GL C+     F        H+       +  +   G   S     A  + 
Sbjct: 44  HEIWRKAGATGLLCTDIAPEFGGAGGDFRHEAVF-YEEMARRSLTGMNASVHSIVAHYLF 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ S E             +   + +TE   G+D+  I ++  +  +
Sbjct: 103 NHGTDDQKRRYLPRLASGE-------------LVGAIAMTEPGTGSDLQGIRTRADRSGE 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGN 281
           G Y ++G K F+S+  ++   +++A+ +   G      L+ +  +  G    R+ +K+G 
Sbjct: 150 G-YVINGAKTFVSNGFLAGLVLVVAKTDTSQGARGTSILIVETQNCPGYRVGRVLDKMGL 208

Query: 282 RSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           ++  T EL F +        L     +G  + M  L    +   + +++ M  +    + 
Sbjct: 209 KAQDTSELFFDDVHVASDQLLGGKEGSGFFQLMGDLPYERMVIGVTALAAMEGAYQVTLD 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  + D    K  +A+IA +I    A   R        +  +  A+ A    
Sbjct: 269 YVRGRKAFGQTIADFQNTKFRLAEIATEIKVGRAFIDRCVEDLVAGRLDTATASMA---- 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K W  +    V+   ++  GG GY+ E  I+R Y ++    I  G+   M   +   
Sbjct: 325 ---KLWGSEAQGRVVDICVQLFGGYGYMNEYLISRMYTDARVQRIYGGTSEIMKEVISRA 381

Query: 458 L 458
           L
Sbjct: 382 L 382


>gi|218781189|ref|YP_002432507.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762573|gb|ACL05039.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 380

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 133/357 (37%), Gaps = 25/357 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVAL 164
           ++    G+    +   +            A         ++G L++           +  
Sbjct: 43  KKMADFGILGLHFPEEYGGSGADVITTALAGEALAEGGADSGFLLAYGAHTFLCGDTIFR 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K + PKI S E                 +G+TE   G+D+A++ +  +K  D 
Sbjct: 103 NAAEAQRKKYIPKICSGEM-------------IGCMGVTEPDAGSDMASMKTTAEKAGDK 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  + P++D  ++ A+ +       V   + +    G        K+G R++
Sbjct: 150 YVLNGSKMFITNGPIADVAVVYAKTDPAAKHAGVSAFIVEKGTPGFSAGPPLKKMGVRTS 209

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARR 341
            T EL F++        L       +     +  D +++   +V  +   + +   YA+ 
Sbjct: 210 LTSELIFADCEIPAENLLGKEGDGFKMASQTVEWDRSVLLAPTVGSVAYLINKCSRYAKD 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      + +   +KR +A++ +   AA +L +R+A + D+ +          + A + K
Sbjct: 270 RIQFDRPIAEYQAIKRKLAELKIFEEAARSLVYRIAWAKDQGQP------LNHLYASVAK 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    + A + +A+   GG GY +E  + R +R+    +I  G+ +   + +  ++
Sbjct: 324 LFIGDWSMAPMNDAVTLHGGYGYCQEYDVERVFRDGRLAAIGGGTSDIQRMIISRMI 380


>gi|149201321|ref|ZP_01878296.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
 gi|149145654|gb|EDM33680.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035]
          Length = 381

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 121/355 (34%), Gaps = 27/355 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL C+     +        H+         A L +      S   A  +    +  
Sbjct: 48  AGALGLLCTSIPEEYGGAGGDFGHEAVICIEQGRANLASWGNPIHSGIVAHYILAYGSEA 107

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + W PK+ S E                 L +TE   G+D+  I ++  +  +  Y L+
Sbjct: 108 QKQKWLPKMVSGEM-------------VGALAMTEPGAGSDVQGIKTRAIRDGNA-YRLT 153

Query: 230 GHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATV 287
           G K F+++       I+ A+ + + G   +  ++ +     G    R   K+G  +  T 
Sbjct: 154 GQKTFITNGQHAELIIVAAKTDPKEGAKGISLVVVETEGAQGFARGRNLEKVGMHAGDTS 213

Query: 288 ELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           EL F N        L G+       +        L  A  +   M  ++   I Y + R 
Sbjct: 214 ELFFDNVEIPPENILGGEEGRGFYQMMQQLPQERLIIACGAQGAMEGAVERTITYCKERE 273

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             GG ++     +  +A+     A   A                E+AA A       KYW
Sbjct: 274 AFGGPILQFQNTRFKLAECQTKTAVCRAFLDSCITEHMRGDLSVEKAAMA-------KYW 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  V+ E ++  GG GY++E  IA  + ++    I  G+   M   +   L
Sbjct: 327 LTDTQGEVLDECLQLHGGYGYMQEYDIAEMWADARVQRIYGGTNEIMKELIARAL 381


>gi|85706529|ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85668941|gb|EAQ23809.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 388

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 145/379 (38%), Gaps = 32/379 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMA 144
               E W+K    P    +LRR    G+    +D  +          +  A         
Sbjct: 34  TAKAEPWEKDGMVP--RDVLRRMGDLGVLGMRYDEQYGGSGLNVMSSVVLAEEVGRSTFG 91

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              A  L+  +  ++  +    +P     W P I S E                 + +TE
Sbjct: 92  GFSATVLVH-TDMASPHLENAGSPEQKARWMPSITSGE-------------KIAAVAVTE 137

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR-VGCFLVPRLL 262
              G+D+A + ++  +     + ++G K F+++ +  D + + A+ +    G   +    
Sbjct: 138 PGAGSDVAGMRTRAVQDGSD-WVINGTKMFITNGVHGDIYFVGAKTDPDAKGSRGITMFA 196

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
            +    G    R  NK G   + T EL F +       +LG++N     V        + 
Sbjct: 197 VEKGTPGFSVGRALNKTGWLCSDTAELIFEDVRIPAENVLGEVNRGFYSVMKNFQNERIV 256

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              M+ +  + +L   + Y ++R   GG+L D+  +++ +AD    I A   L +  A+ 
Sbjct: 257 LGAMACAEAQSALEMTVDYVKQRKAFGGVLWDKQTVRQRLADCQTRIEAGRQLIYHAASL 316

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               +   +E         + K +C ++  +V+ + ++  GG GY+ E  + R  R++  
Sbjct: 317 DAAGRDCVKE-------VSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARV 369

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M+ +V   +
Sbjct: 370 QAIGGGATEVMLEEVAKRM 388


>gi|187918808|ref|YP_001887839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187717246|gb|ACD18469.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 398

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 144/396 (36%), Gaps = 28/396 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ +  PA   L++R    G       R F          +R A     A +  
Sbjct: 25  PRENEIEQADAVPA--DLVQRMRELGYFGWSIPRDFGGAGLSTEQLVRGAFELSQASVAF 82

Query: 149 -GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +   +  +    T    + + P++ S E+                  LTE   
Sbjct: 83  RARVGTNTGIGSEALVADGTDTQKQRYLPRLASGEF-------------TGAFALTEPDA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           G+D  A+ +  ++  D         +  ++P++D F ++A+ E  + G   +   L +  
Sbjct: 130 GSDATALRTTARRDGDHYILDGSKCFITNAPIADLFTVMARTELAKPGAGGISAFLVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAI 322
             GL      +K+G   +   ++ F          +      G    MK+L    +  A 
Sbjct: 190 TPGLSTSAPYDKMGQAGSPVGDVVFEGCRVPAANLIGGKEGMGFRTAMKVLNKQRIHLAA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +        L EA+ Y  RR   G  + +  +++  IA+   +I AA ++    A   D 
Sbjct: 250 LCTGPAMRMLEEAVAYTSRREQFGKPVAEFQLVQALIAECQTEIYAARSMILETARKRDA 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + EA+  ++       +  +M   V   A++ +GG GY+   ++ R YR+  A  I
Sbjct: 310 GEDVALEASMCKM-------FASEMCGRVADRAVQMLGGRGYLAGNAVERFYRDVRAFRI 362

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
             G+     L++  +  +     +Q     +    +
Sbjct: 363 YEGTTQIHQLNIAKITLRRAAERDQAKVRADAACAA 398


>gi|70607507|ref|YP_256377.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68568155|gb|AAY81084.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 557

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 113/512 (22%), Positives = 205/512 (40%), Gaps = 45/512 (8%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGG 91
           G N ++ D     L+  F   V  +L  LGE+       E++   +    P+   +   G
Sbjct: 18  GKNHFTIDKPFQQLLKYFRGAV-PDLTPLGEFAGG-ELLEISDYIDKGAHPKHIMWSIDG 75

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R D+V   P    +L R + +  H + +        +        A +YL++      +
Sbjct: 76  QRVDEVWISPMQRLVLERLLKE-YHVNAYPYKGGDWFQ------HFASIYLISDPGIACI 128

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +  +A  +         +     +                 +      TE +GG+D+
Sbjct: 129 LTVTNQTAYTLYKYGDAYQ-RTLVDGMIG----------ENDKILFGATWFTEVQGGSDL 177

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVGCFLVPRLLED 264
            A   +  K  +        K+F S + ++   ++ A+ +G       +G FL P+L   
Sbjct: 178 GANLVEAYKDGNTWKLNGITKYFASDAGLAHYALVTARPKGAPSGAKGLGLFLAPKLDSS 237

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N L  +RLK K    S  T E+EF  +    +G+LN       +   +  + +A  +
Sbjct: 238 GRRNFL-IRRLKEKSATISVPTGEVEFHGSEAQPIGELNQGIYYTVETLTVSRIANAFGA 296

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA----NSF 380
           +   R +  EA +YA++R   G  LI+ P+++R + D+ + I    AL+ +       S+
Sbjct: 297 LGLARKAYLEAYYYAQKRKAFGKPLIEHPLVRRDLLDMEVYIEGTMALALKSVSEFQKSW 356

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 +E   YAR++  I K     M+  V   AME  GG G++ E  I R +RE+   
Sbjct: 357 MSTPPYNENYNYARLLTHIAKNMTADMSAYVTKMAMELHGGIGFLREFPIERLHREALIT 416

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF------EQLFSTLEQDLGSSGKKVITILRDSIS-- 492
            I  G  N   LD+L  L K           E L + L++D    G   +  + +S+S  
Sbjct: 417 PIWEGPSNIQALDMLEALVKKKAHLTLIKDMENLVNQLKEDR-DLGDLALRSINESLSGI 475

Query: 493 ---LCKEDKGLARFLTEKIALASSAAALYRAG 521
                ++ +  A+ L   +  A +   L  AG
Sbjct: 476 LGMQIQDAQYYAKDLLNTLGNAVATVLLLHAG 507


>gi|330448417|ref|ZP_08312065.1| acyl-CoA dehydrogenase, N-terminal domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492608|dbj|GAA06562.1| acyl-CoA dehydrogenase, N-terminal domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 386

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 131/360 (36%), Gaps = 34/360 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L +     GL        +        AH I    L   +        + S    + +  
Sbjct: 48  LWQSLGEMGLLGVTVSEQYGGADMGYLAHVIIMEELSRASASVGLSYGAHSNLCVNQIFR 107

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + + PK+ + E+                L ++E   G+D+ ++  + ++  D 
Sbjct: 108 NGNDVQKQTYLPKLLTGEH-------------VGALAMSEVNAGSDVMSMQLKAEQHDDH 154

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  + P ++  ++ A+ +       +   + +    G    +  +K+G R +
Sbjct: 155 FVLNGNKMWITNGPEANTLVVYARTDDNA----ITAFIIESQFKGFSTAQKLDKLGMRGS 210

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HY 338
            T EL F N         N+        K+L+  LD   + ++   + +A+A       Y
Sbjct: 211 NTCELVFINCHVP---KENLLGEIHHGAKVLMSGLDYERVVLAAGPLGIAQACLDLVIPY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  + +  +++  +AD+   + AA +  + +A + D  +   ++AA   ++  
Sbjct: 268 IHERKQFGKAIGEFELIQAKVADMYTQLNAARSYVYTVAKACDRGEVTRKDAAGVILL-- 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  ++A  +  E ++ +GG+GYI +    R  R++    I  G+     + +   L
Sbjct: 326 -----SAELATKMALETIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 380


>gi|322417928|ref|YP_004197151.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320124315|gb|ADW11875.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 582

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 141/374 (37%), Gaps = 34/374 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R+    GL  +     +  +  ++   +                   +      +    
Sbjct: 64  MRQCAELGLFLAEVPEEYGGLELEKTTNMLMIEKVAPVGSFVMAFGGHTGIGMLPLVYYG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225
           TP   + +  K+ + E+                  LTE   G+D  +  +     +DG  
Sbjct: 124 TPDQKERYLGKLAAGEWFG-------------AYALTEPDCGSDPLSSRTTAVLSADGTH 170

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +D F + A+++G+         L +    G      + K+G + +
Sbjct: 171 YILNGAKQFITNSSFADLFTVFAKIDGKH----FSAFLVEKGFEGFSVGAEEKKMGLKGS 226

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +T  L   +       LLG++        ++  +  L  A  ++   + +  ++  Y+  
Sbjct: 227 STTPLVLQDVKVPVANLLGEVGKGHKIAFNVLNVGRLKVATQTLGMAKAAFGDSAAYSAE 286

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------------EAKSRSEE 389
           R   G ++ D   +K  +AD++  I A+ ++ +R+A   D              +   + 
Sbjct: 287 RKQFGRVIGDFGAIKEKLADMSAAIFASESVIYRVAGLLDGQIATLDHGGPDYYERYQKA 346

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    I K +C +    V+ EA++  GG GYI E ++ RHYR+S    I  G+   
Sbjct: 347 IEEFAAECAIAKVFCTEQLDFVVDEAVQIHGGYGYISEYAVERHYRDSRIQRIFEGTNEI 406

Query: 450 MVLDVLNLLEKGTN 463
             + V  +L +  +
Sbjct: 407 NRILVPTMLLRRAD 420


>gi|6680618|ref|NP_031408.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Mus musculus]
 gi|1168284|sp|P45952|ACADM_MOUSE RecName: Full=Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=MCAD; Flags: Precursor
 gi|463909|gb|AAA76733.1| medium-chain acyl-CoA dehydrogenase [Mus musculus]
 gi|148679949|gb|EDL11896.1| acyl-Coenzyme A dehydrogenase, medium chain [Mus musculus]
          Length = 421

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 121/362 (33%), Gaps = 32/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++R+   GL  +    S   +                        +  +      V 
Sbjct: 75  FPLIKRAWELGLINAHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVI 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L    +  K +  ++              +  +     +TE   G+D+AAI ++ +K  D
Sbjct: 135 LAGNDQQKKKYLGRMT-------------EQPMMCAYCVTEPSAGSDVAAIKTKAEKKGD 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  +   ++ + +LA+                + +    G+   + +  +G
Sbjct: 182 EYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMG 241

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R + T  + F +         NV  G     KI +          A  +V   + +L E
Sbjct: 242 QRCSDTRGIAFEDVRVP---KENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +       
Sbjct: 299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNT------- 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K +   +A  +  +A++  GG G+  E  + +  R++    I  G+     L +
Sbjct: 352 YYASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLII 411

Query: 455 LN 456
             
Sbjct: 412 AR 413


>gi|164656967|ref|XP_001729610.1| hypothetical protein MGL_3154 [Malassezia globosa CBS 7966]
 gi|159103503|gb|EDP42396.1| hypothetical protein MGL_3154 [Malassezia globosa CBS 7966]
          Length = 422

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 141/405 (34%), Gaps = 44/405 (10%)

Query: 66  LSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LS   Q    +A   T     P    +          E       +++++   GL  +  
Sbjct: 44  LSEDQQAYQDLARKFTRDNIIPVARHHD---------ETMEYPWDVIKKAHSVGLLNTHV 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +                           +  +  + + + +    +    +  ++  
Sbjct: 95  PEKYGGPGLGLMECSLITEELAYGCTGIQTAIEANGLAEAPLIVAGNDQQMSKYLGRMT- 153

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                       +  +     +TE   G+D+A I+++ +K  D         W  +   +
Sbjct: 154 ------------EEPLVASYCVTEPGAGSDVANISTRAEKRGDKWVLNGTKMWITNGGHA 201

Query: 241 DAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           + + +LA+          +   + DG   G+   + +  +G R + T  + F +      
Sbjct: 202 NWYFVLARTNPEERPHKALSGFIVDGDAPGVLRGKKEINMGQRCSDTRMITFEDVEVP-- 259

Query: 300 GDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            + N+   P +  KI +   D         +V   + +L EA  YA+ R   G  +ID  
Sbjct: 260 -EENLLGKPGDGFKIAMGAFDITRPLVASGAVGLAQRALYEATVYAKERKTMGKSIIDHQ 318

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+ + + ++  L ++     D+ K  S  A+ A+ +A        + A +   
Sbjct: 319 AVAFMLADMQMAVESSRNLVWKACWYKDQGKRNSFYASMAKCLA-------SRAAVSNAD 371

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A++  GG G+  E ++ + YR++    +  G+     L +   L
Sbjct: 372 QAVQIYGGLGFNSESAVEKLYRDAKIFELYEGTSQIQRLIISRQL 416


>gi|258645297|ref|ZP_05732766.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470]
 gi|260402647|gb|EEW96194.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470]
          Length = 378

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/397 (16%), Positives = 142/397 (35%), Gaps = 27/397 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ +    QEL  +A           P   R DK         LL      G+      +
Sbjct: 2   DFSVDVKQQELIALAKTIAE--KEIAPRALRIDKSGVMDE--ELLEILKESGMTQLSVPK 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +             +            + + +  ++  +    +    +D    +    
Sbjct: 58  EYGGAGIDLLTGALISEQLSKGCAGVATICAANSLASFPILFAGSDMQKRDLFDCL---- 113

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              LTE   G+D  A++ + +K+  G        +  ++P++D 
Sbjct: 114 ----------NRGGMACFALTEPGAGSDAGAVSCRAEKVEGGYILNGTKCFITNAPIADK 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             + A      G   +   L D    G+   + ++K+G R++AT E+ F + F      +
Sbjct: 164 ITLFANTREGGGIRGLTVFLVDADTKGISIGKEEDKMGIRASATAEVIFEDCFVPDSARV 223

Query: 303 NV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  M+   +     A +SV   + ++  A+ Y+  R   G  +    ++++ I
Sbjct: 224 GKEGRGFMIAMQTLQMSRPVVAAISVGIAQAAIEAAVAYSHHRKQFGVKIATFEMVQQMI 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ +   AA  L+++   +      +      A + + ++K +    A  V   A++ +
Sbjct: 284 ADMVMKTEAARILTYKACVAQMNKDKK------AGLYSAMSKCFASDTAMEVTTTAVQVM 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG+GY  E  + ++ R++    I  G+     L + N
Sbjct: 338 GGNGYSRENPVEKYMRDAKIMQIYEGTNQVQRLVIAN 374


>gi|325968317|ref|YP_004244509.1| butyryl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
 gi|323707520|gb|ADY01007.1| Butyryl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
          Length = 409

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 137/364 (37%), Gaps = 27/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +LR+    GL     D S              + + LM +L        S  +  +  
Sbjct: 49  RDILRKLGEQGLWGIGIDESLGGQGGDT-----VSAVILMEEL--------SRVAPPLAV 95

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T  +         S E       P+ +        +TE   G+D+A I ++  +  D
Sbjct: 96  IRGTNDLFVTPLLLFGSDELRRKYVPPIARGEAFGAHAMTEPCCGSDVAGIQTKAVRRGD 155

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+S+   +D  ++ A+    +     F +   + +    GL       K 
Sbjct: 156 -RWIINGRKIFISNADIADYIMVFARTSEPQPNRRWFGISAFIVEKGTPGLKIGAKFEKR 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R +  VE+ F +        +  V  G +  M+      +  A  ++   + +  +A 
Sbjct: 215 GLRGSHAVEVIFDDVEVSDENRVGDVGMGFIIAMETYDRTRVGVAAQALGMAQAAFEKAF 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R   G  L     ++  +A++  ++  A  L++  A   D+ +   +       +
Sbjct: 275 QYSLQRTAFGQYLASFEAIQFGLAEMMAELMTARYLTYLAAYLADQGREEFK------YV 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K++  + A  ++++A++  GG G I E  I R  R+     I  G+ N   +    
Sbjct: 329 ASLAKFYTTEAAEKIVSKAIDVHGGVGVIHETGIERFLRDVKITEIYEGANNIQRVVAFR 388

Query: 457 LLEK 460
            L +
Sbjct: 389 QLIR 392


>gi|328951545|ref|YP_004368880.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451869|gb|AEB12770.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 534

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 119/524 (22%), Positives = 211/524 (40%), Gaps = 48/524 (9%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y  D  L  ++ ++         ELE  G Y+     +    +     P L  +  
Sbjct: 9   GTNHYRLDPDLRNVLRHYWREAPQHEAELERWGAYMGREAYEVAYHVDQDAPPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+    PA   +L                  P     +     A  YL+A     
Sbjct: 69  YGNRVDRARLSPAQRTVLEELR----------PITRPPYEGGSWHHHYALGYLLADPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +        ++DW  ++   E                   +TE +GG+
Sbjct: 119 CILTITHQVAYAIHKYA--PQYEDWKHRLLYGE-------------AYGATWMTEIQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A  +  +K         G K+F S   ++D  ++ A+ EG       +  FLVPRL 
Sbjct: 164 DLGANRTLARKEDGAWRLFGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLVPRLN 223

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G+ N    +RLK+K G R+  + E+E   +  + +G L        +   +  L +A+
Sbjct: 224 RKGTLN-YRVRRLKHKSGTRAVPSGEVELEGSEAYPIGRLEEGIYYTLETLTVSRLANAV 282

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +  EA    R RH  G  L++QP+++  + D+A+  A   AL+F    +FD 
Sbjct: 283 AAMGIAQKAQLEARFRVRARHAFGKRLLEQPLVRYDLTDLAVRQAGGLALAFHAVAAFDA 342

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       +    YAR ++ + K      A A+   AME  GG G++EE ++AR +RE+ 
Sbjct: 343 AWRDRPPYTPAYHYARFLSHLAKNRTADHAAAITQRAMELFGGLGFLEEYAVARWHREAL 402

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSI---- 491
              I  G  N   LD+L  ++K        E++ +TL        +  + +L  ++    
Sbjct: 403 ITPIWEGPSNIQALDMLEAMQKKHAHRPFLEEVTATLGAQPDPEAQATLKVLEATLSRLN 462

Query: 492 -SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
            +  +    LA+   E++A A++ AALY    +      +  R 
Sbjct: 463 GARPEAAAWLAKAALERLADAATVAALYALAGSAGERYAVLARL 506


>gi|258512811|ref|YP_003186245.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479537|gb|ACV59856.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 533

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 122/514 (23%), Positives = 210/514 (40%), Gaps = 49/514 (9%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N +S D +L  ++ +F         +L   G        + +  + +   P L  +  
Sbjct: 9   GTNHFSQDIVLQDVLRHFWPQFEAHEADLTRFGSIAGREVYETVYHVDHDAPPVLVQHNL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G+R D+    P+  ALL+                 P     +     A  YL+      
Sbjct: 69  DGKRIDRARLSPSHLALLKALA----------FINRPPYEGDSWHHHFAYGYLIGDPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +          +W   + S                     +TE +GG+
Sbjct: 119 CVLTITQQVAYAIHKYAPE--FAEWKEALLSG-------------RAFGATWMTEVQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG------CFLVPRLL 262
           D+ A  +  +     ++ LSG K+F S   ++D  I  A+ EG          FLVPRL 
Sbjct: 164 DLGANQTTARFDG-EVWRLSGDKYFASGAGLTDYAIATARPEGAPSGPKGLALFLVPRLR 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           +DGS N    +RLK+K   R+  + E+EF +T  FL+GD ++      +   +  L +A 
Sbjct: 223 KDGSLN-FHVRRLKDKSATRAVPSGEVEFVDTEAFLIGDKHLGIYYTLENLTVSRLANAA 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L E +H  R R   G  L D  +++R + D A+  A   AL+F+  + FD+
Sbjct: 282 GAMGIAQKALLEVMHRVRHRRSFGHALRDHALIRRDLTDFAVRHAGGLALTFQAVDLFDQ 341

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       S +   AR+   + K      A  + A AME  GG G++EE +IAR +RE+ 
Sbjct: 342 AWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYAIARWHREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISLCK 495
              I  G  N   LD L  L K  ++ + +       LG     G   +  +R  ++  +
Sbjct: 402 ITPIWEGPSNIQALDFLETLIKLGSVDDVIDRIAAPLLGHDVPGGGDAVKRVRQEVAALR 461

Query: 496 -----EDKGLARFLTEKIALASSAAALYRAGMND 524
                E +  ++ +   +A  + AA+LYR     
Sbjct: 462 ALPRPEAEWQSKSVLRTVADLAQAASLYRLAETA 495


>gi|78042926|ref|YP_360557.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995041|gb|ABB13940.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 386

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 133/360 (36%), Gaps = 24/360 (6%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTS 158
           H     L+++    G    I    +    +   A  I    +  +         + ++  
Sbjct: 35  HRFRRDLVQKMGELGFLGCIIPEEYGGNGQGYLAVAILCEEIARVHSSLRIIFAANTLGP 94

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    T    K + P + S              ++     +TE   G+D+A++T++ 
Sbjct: 95  GVTIYRYGTEEAKKKYLPGLVSG-------------ALIGCFAITEPNAGSDVASMTTKA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W   +P++D  ++ A  +       +   + D +  G+  + ++ K
Sbjct: 142 IRDGDYYILNGSKMWISLAPVADIALVYAYTDPSRRAKGMSAFIVDLNSEGVTIEPIEEK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +GN ++    + F N        L     G    M+ L    L SA  +V   +  L  A
Sbjct: 202 LGNWASPVGAITFENVRVPGENLLGQEGQGFKICMQQLDDTRLASAAGAVGVAQACLDAA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  +    +++  IA + ++I AA  L++R A   D+    + E      
Sbjct: 262 VEYANTREQFGQKVGQFQMIQDWIAQMVVEIEAARLLTYRAAFLKDKGVPSTRE------ 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K +  + A      A+      GY EE  +AR++R++    I+ G+ N   L + 
Sbjct: 316 -TSMAKLFAGETASKCADYALRIFSAYGYSEEYPVARYFRDAKYYQIVEGTSNIHKLILA 374


>gi|134093872|ref|YP_001098947.1| putative acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133737775|emb|CAL60820.1| Acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 596

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 89/449 (19%), Positives = 177/449 (39%), Gaps = 55/449 (12%)

Query: 66  LSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +    +E AR  +     L+      P   +   V   P +    +     G        
Sbjct: 37  VEAVLEENARFCSEVIAPLNQTGDRQPSAWKDGAVTTTPGFKEAFKAYGAAGWQGVQHPV 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            F      +   +    + ++        + P +T  ++ ALMT  +    + + P   +
Sbjct: 97  YFGGQGLPK--MVATPCMEMLNAANLSFALCPLLTDGAIEALMTAGSEAQKETFLPNFIA 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE + G+D+A + S+     DG Y +SG K F++    
Sbjct: 155 GKWTGT-------------MNLTEPQAGSDLAMVRSRAVPQGDGTYKISGTKIFITYGEH 201

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+          +  F+VP+ L +     G+ N      +++K+G R++
Sbjct: 202 DMAENIVHLVLARTPDAPEGVKGISLFVVPKFLVNADGSLGARNDAYCVSIEHKLGIRAS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L+F +     G L+G+ N     +  M         I  ++    +  +A+ YA+ 
Sbjct: 262 PTAVLQFGDHGGAIGTLVGEENRGLETMFIMMNAARFAVGIQGIAVAERAYQKAVSYAKD 321

Query: 342 RHVSGGI--------LIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSRS 387
           R  S  +        +I QP ++R +  +   I AA AL++       +A+   +A+ RS
Sbjct: 322 RVQSKDLEGSATAVSIIHQPDVRRMLMSMRAQIEAARALAYVGAAAFDIAHHHADAEVRS 381

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A+   + P+ K W  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+ 
Sbjct: 382 SHQAFYEFLVPVIKGWATEMSIDVASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGTT 441

Query: 448 NAMV--LDVLNLLEKGTNLFEQLFSTLEQ 474
                 L        G  +   + + + +
Sbjct: 442 AIQANDLVGRKTARDGGAVARDIIARVRK 470


>gi|121599566|ref|YP_994233.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385246|ref|YP_001028114.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|121228376|gb|ABM50894.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
          Length = 298

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 156/295 (52%), Gaps = 8/295 (2%)

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           QRLK+K+GNRSNA+ E+EF N +G ++GD       + +M     LD  I S + MR +L
Sbjct: 2   QRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRAAL 61

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF--DEAKSRSEEA 390
            +AIH+AR R   G +L DQP+M+  +AD+AL+  AAT L  RLA++F  D A    +  
Sbjct: 62  VQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAHAFEEDAAARSPQAR 121

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            + RI+    K+W CK       EAME  GG+GY+E   +AR YRE+P NSI  GSGN M
Sbjct: 122 GWRRIVTSAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVM 181

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDL--GSSGKKVITILRDSISL-CKEDKGLARFLTEK 507
            +DVL  +E+  +    LF          +     +  L   +SL  +  +  AR + ++
Sbjct: 182 CIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLEPEPREACARRIAQR 241

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNC---HSTHCMLHGRFNAAHIIDSLY 559
           IAL + A+ L R G   +A  F+  RF  +          L    + A +++  +
Sbjct: 242 IALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFGTLPATIDHAALVERAF 296


>gi|109008499|ref|XP_001101187.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Macaca mulatta]
          Length = 454

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 107/293 (36%), Gaps = 21/293 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G+D+A I ++ +K  D         
Sbjct: 164 MPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 223

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   +  + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 224 WITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 283

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     KI +   D         +V   + +L EA  YA  R 
Sbjct: 284 VFEDVKVP---KENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEATKYALERK 340

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +LI+   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 341 TFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKAF 393

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 394 AGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 446


>gi|291301369|ref|YP_003512647.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290570589|gb|ADD43554.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 380

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 132/361 (36%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L   +   GL C      +         +    A     ++      +  +  +   +
Sbjct: 40  RELWTAAGRQGLLCVDLPEKYGGAGLDDFRYHAIVAEELARSRATGVGFVVHNDMAVPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           + + T      W   + + E             +   + ++E   G+D+  I +   +  
Sbjct: 100 SRLATEEQKDRWFSGLCAGE-------------LIAAIAMSEPGAGSDLQGIATTAVRDG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +  Y L+G K F+++ + +D  I+LA+ +             +    G    R  +KIG 
Sbjct: 147 ED-YVLNGQKTFITNGIHADLVIVLARTDPEAAHLGFSLFAVERGMEGFERGRKLDKIGM 205

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+  T EL F++       L+G+       + +      L  A++  +G      E + Y
Sbjct: 206 RAQDTAELFFNDVRIPAANLVGEEGKGFIYLMEGLPRERLAIAVVGQAGAEAVFDETVEY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +     ++  +A++  ++        +   + +  +    EAA       
Sbjct: 266 VRGRKAFGRNIGKFQHVRMTMAEMKTELHIGRTFVDQCMLALNAGELDVTEAAM------ 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +K+W  +M   V  + ++  GG GY+ E  IA+ Y ++ A +I  G+   M   +   L
Sbjct: 320 -SKWWITEMQKRVTDQCLQLHGGYGYMSEYPIAQAYLDTRAQTIYGGTTEIMKEIIGRSL 378

Query: 459 E 459
           +
Sbjct: 379 D 379


>gi|194881310|ref|XP_001974791.1| GG21959 [Drosophila erecta]
 gi|190657978|gb|EDV55191.1| GG21959 [Drosophila erecta]
          Length = 627

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 155/413 (37%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP   + + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 162 ILLYGTPEQKEKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKS 208

Query: 222 SDG--IYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
           +DG          W  +  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 209 ADGKHFVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGP 268

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 269 PEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 325

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  + +A  +A  R   G  L +   ++  +A + +   A  +++F ++ + D   K   
Sbjct: 326 KKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG G++ +  + R  R+     I  G+ 
Sbjct: 386 LEAA-------ISKIYASESAWYVCDEAIQILGGMGFMVDTGLERVLRDLRIFRIFEGTN 438

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499
           + + L +    +   G++L   ++ F     +LG   K+       ++ L   D      
Sbjct: 439 DILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVV 498

Query: 500 -----LARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                 A+     I L   +    L R   N + +  L  R  +     + M+
Sbjct: 499 SELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAMV 551


>gi|57529797|ref|NP_001006511.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus
           gallus]
 gi|53133742|emb|CAG32200.1| hypothetical protein RCJMB04_19o8 [Gallus gallus]
          Length = 431

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 124/373 (33%), Gaps = 34/373 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           FH  W         L  ++   GL           +              +         
Sbjct: 76  FHAEWEKDGQVSRELWEKAGQQGLLGVAIAEKHGGIGADILSSAVVWEEQMYVNCTGPGF 135

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +A   T    K + P++ + +                 + +TE   G+D+
Sbjct: 136 SLHSDIVMPYIANYGTEEQIKRFIPQMVAGKC-------------IGAIAMTEPGAGSDL 182

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
             + +  +K     + L+G K F+++  M D  I++     E R     +   L +    
Sbjct: 183 QGVRTYAKKDGSD-WILNGSKTFITNGWMCDVVIVVTVTNREARSPAHGISLFLVENGTK 241

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  NKIG ++  T EL F +       LLG  N     +        L  A +++
Sbjct: 242 GFNKGRKLNKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAELPQERLVIADLAL 301

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +       E   Y R+R   G  +     ++  +A++  +I    A         D    
Sbjct: 302 ASCEFMFEETRDYVRQRKAFGKTVAHLQTVQHKLAEMKTNICVGRAF-------LDNCLQ 354

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E       A + KYW   +  +V  + ++  GGSGY+ E  IA+ + ++    I  G
Sbjct: 355 LHSEKRLDSPTASMAKYWASDLQNSVATQCVQLHGGSGYMWEYPIAKAFVDARVQPIYGG 414

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   +
Sbjct: 415 TNEIMKELIAREI 427


>gi|326384072|ref|ZP_08205755.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197232|gb|EGD54423.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 386

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 127/366 (34%), Gaps = 29/366 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H     L  ++   GL C      F        H+    +    A   A      S   A
Sbjct: 43  HQVDRDLWTKAGAAGLLCLDVPEEFGGSGGDFGHEAVVQQELCAAGDSALAFAVHSTIVA 102

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T    + W P   + E               + + +TE   G+D+ ++ +   
Sbjct: 103 HYLNSYATDEQKRRWLPGCATGE-------------SVLAIAMTEPGTGSDLQSVRTTAV 149

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKN 277
           +  D  Y ++G K F+S+    D  +++A+ + + G   +   + E     G    R+  
Sbjct: 150 RDGDH-YVINGSKTFISNASHCDLLVIVAKTDPKQGAKGISLFVAETADLPGFERGRVLE 208

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---- 333
           KIG     T EL F++        L    G     +++  L    + +    V+ A    
Sbjct: 209 KIGQHGQDTRELSFTDMRVPADNLLGGVEGQGF-YQLMSQLQRERLIIGVGAVAAAEAAV 267

Query: 334 -EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E I YA++R   G  ++     K  +A+   D+ A   L        D           
Sbjct: 268 SETIAYAKQREAFGKPILSFQNTKFVLAECKADVLAGKTLV-------DHCIGEQIAGRL 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A + K W  +    ++   ++  GG GY+ E  IAR Y ++   +I  G+   M  
Sbjct: 321 DPATASMAKLWGTEKQKKIVDRCLQLFGGYGYMMEYPIARMYTDARVQTIYGGTSEIMKE 380

Query: 453 DVLNLL 458
            +   L
Sbjct: 381 LIGRSL 386


>gi|330952819|gb|EGH53079.1| Acyl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 383

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 140/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W   AL+ +    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDALVAKLGELGLLGMVVPEQWGGT 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A      A    G LMS   +      L   T      W  K+ +      
Sbjct: 64  YIDYVAYALAVEEISAADAATGTLMSVHSSVGCGPVLNYGTDEQKHAWLEKLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM 245
                          LTE   G++   + ++ +   D  + ++G K F+S+   +   I+
Sbjct: 119 --------RAIGCFCLTEPHAGSEAHNLRTRAELQGD-QWVINGAKQFVSNGKRAQLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPALGKKGLSAFLVPTENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPSANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ YAR R      +I+   +   +A
Sbjct: 230 GKGLS--IALSNLEGGRIGIAAQALGIARAAFEAALAYARERVQFDKPIIEHQSIANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I AA  L+   A     A++   E       A   K +  +MA  V  +A++  G
Sbjct: 288 DMHTRINAARLLTLHAARLRSAAQACLSE-------ASQAKLFASEMAEWVCYKAIQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R YR++    I  GS     L +   L 
Sbjct: 341 GYGYLEDYPVERFYRDARITQIYEGSSEIQRLLIARELR 379


>gi|84501840|ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389835|gb|EAQ02469.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 388

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 141/376 (37%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLE 147
            E W++    P    +LRR    G+    +D  +          +  A            
Sbjct: 37  AEPWEEEGKVP--RDVLRRMGDLGVLGMRYDEQYGGAGLDVMSSVVLAEEVGRSTFGGFS 94

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L+  +  ++  +    TP     W P I S E                 + +TE   
Sbjct: 95  ATVLVH-TDMASPHLENAGTPEQKARWMPSIVSGEM-------------ITAVAVTEPGA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR-VGCFLVPRLLEDG 265
           G+D+A + ++  +     + L+G K F+++ +  D + + A+ +    G   +     + 
Sbjct: 141 GSDVAGMRTRAVQDGSD-WVLNGTKMFITNGVHGDLYFVGAKTDPDAKGSRGITMFAVEK 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G    R  NK G   + T EL F          L  V+ G    MK      +    
Sbjct: 200 GTPGFSVGRALNKTGWLCSDTAELIFEEVRIPTENVLGEVNHGFYSVMKNFQNERIVLGA 259

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M+ +  + +L   + Y ++R   GG L D+  +++ +AD    I A   L +  A     
Sbjct: 260 MACAEAQTALDITVDYVKQRKAFGGALWDKQAVRQRLADCQTRIVAGRQLVYHAAGLDAA 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +E         + K +C ++  +V+ + ++  GG GY+ E  + R  R++   +I
Sbjct: 320 GRDCVKE-------VSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAI 372

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+ +V   +
Sbjct: 373 GGGASEVMLEEVAKRM 388


>gi|333022890|ref|ZP_08450954.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332742742|gb|EGJ73183.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +   +          
Sbjct: 32  HLAPHALEWDREKHFPV--DVLRKAAGLGLGGVYVREESGGSGLTRTDGVLVFEALATGC 89

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S       M+             P + +                     LTE 
Sbjct: 90  PCVAAYLSIHNMVGWMIDTYGDEAQRARHLPGLCAM-------------DDLASYCLTEP 136

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +  D  + L+G K F+S   +   ++++A+  G  G   +   L D
Sbjct: 137 GAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMART-GGAGPDGITAFLVD 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL +   ++K+G  +  T ++           +LG          +      L  A
Sbjct: 195 KDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRLGIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  + A++ D
Sbjct: 255 ACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLHQAADALD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +      A  +  + K +       +   A++  GG GY+ E  I +  R+   + 
Sbjct: 315 RKDPQ------APQLIAMAKRFATDSGFRIADRALQLHGGYGYLHEYGIEKIVRDLRVHQ 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL GS   M + V   L
Sbjct: 369 ILEGSNEIMRVIVARGL 385


>gi|302523290|ref|ZP_07275632.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302432185|gb|EFL04001.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 390

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +   +          
Sbjct: 32  HLAPHALEWDREKHFPV--DVLRKAAGLGLGGVYVREESGGSGLTRTDGVLVFEALATGC 89

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S       M+             P + +                     LTE 
Sbjct: 90  PCVAAYLSIHNMVGWMIDTYGDEAQRARHLPGLCAM-------------DDLASYCLTEP 136

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +  D  + L+G K F+S   +   ++++A+  G  G   +   L D
Sbjct: 137 GAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMART-GGAGPDGITAFLVD 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL +   ++K+G  +  T ++           +LG          +      L  A
Sbjct: 195 KDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRLGIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  + A++ D
Sbjct: 255 ACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLHQAADALD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +      A  +  + K +       +   A++  GG GY+ E  I +  R+   + 
Sbjct: 315 RKNPQ------APQLIAMAKRFATDSGFQIADRALQLHGGYGYLHEYGIEKIVRDLRVHQ 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL GS   M + V   L
Sbjct: 369 ILEGSNEIMRVIVARGL 385


>gi|111023060|ref|YP_706032.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822590|gb|ABG97874.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 140/401 (34%), Gaps = 42/401 (10%)

Query: 68  CTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              Q+LA+       N   P    +             P  + ++      GL    +  
Sbjct: 12  DEYQQLAKTVADFAKNVVAPVAAEHDAN-------HTFP--YEVVAGMADMGLFGLPFPE 62

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  +    L  + Q  A  L +     A  +         ++W P++ S 
Sbjct: 63  EYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPIYRFGNEEQKQEWLPQLTSG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D     +  +  S G + ++G+K F+++  +D
Sbjct: 123 -------------KSLAAFGLTEPGAGSDAGGTKTTAKFDS-GEWIINGNKQFITNSGTD 168

Query: 242 A---FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
                 + A    + G   +  +L   S  G   +   NK+G  ++ T  L FS+     
Sbjct: 169 ITKLVTVTAVTGTKDGKKEISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFSDVRVPE 228

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G    ++IL    +  A +SV   +  + E++ YA+ R   G  +     +
Sbjct: 229 ENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFGRPIGHNQAI 288

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              IA +      A    +  A      K   ++AA       I K    + A     +A
Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAA-------IAKLVASEAAMDNARDA 341

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  GG G++ E ++ARHYR+S    I  G+    ++ +  
Sbjct: 342 TQIHGGYGFMNEYTVARHYRDSKILEIGEGTTEVQLMLIAR 382


>gi|226308675|ref|YP_002768635.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187792|dbj|BAH35896.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 383

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 135/373 (36%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       F           +  +      +     M     
Sbjct: 35  EYPEKWIDQMK---QIGIYGLAIPEEFGGSPVSMPCYAQVTQELSRGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A +++L  T      + P++ + E   T             + LTE  GG+D+ A+T+ 
Sbjct: 92  VAKLISLFGTEEQKVKYLPRMATGEIRAT-------------MALTEPGGGSDLQAMTTN 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
            +     +       W  ++  S    +L + +         +  +L +    GL   R 
Sbjct: 139 AKSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIVLVEHG-EGLTVSRD 197

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 198 LPKLGYKGVESCELSFDNYRIAESAILGGTPGKGFGQMMKGLETGRIQVACRALGVATAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D  +    EA 
Sbjct: 258 LEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDSGERCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLYASEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLLEKGTNL 464
             +++ L     L
Sbjct: 371 NVIVSQLVARGGL 383


>gi|150007117|ref|YP_001301860.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503]
 gi|255015268|ref|ZP_05287394.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_7]
 gi|256840494|ref|ZP_05546002.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13]
 gi|298377542|ref|ZP_06987494.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19]
 gi|149935541|gb|ABR42238.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503]
 gi|256737766|gb|EEU51092.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13]
 gi|298265561|gb|EFI07222.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19]
          Length = 568

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 100/546 (18%), Positives = 196/546 (35%), Gaps = 63/546 (11%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNAYS-SDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           + +H P        +   +   + Y  +       + ++     K LE++GE        
Sbjct: 13  HHLHHPLMKRIVELKERGYADKDTYDYAPIDFEDAMDSY----EKVLEIVGEICG-EIIA 67

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
             A   ++  P +      G    +V +       L      GL      R +  +    
Sbjct: 68  PNAEGVDHEGPTV----ANG----RVTYASGTQQNLDAVRKAGLMGIAMPRRYNGLNFPI 119

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
              I AA L   A     +L       A  +         + + P++   E         
Sbjct: 120 VPYIMAADLVSRADAGFENLW-GLQDCAETLYEFGNEDQRQRYIPRVCDGE--------- 169

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                 + + LTE   G+D+ ++  +     +DG + L+G K F+++  +D  ++LA+ E
Sbjct: 170 -----TMSMDLTEPDAGSDLQSVMLKASYNEADGCWYLNGVKRFITNGDADIHLVLARSE 224

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GP 308
            G      +   + D    G+  +R++NK+G + + T EL F N    L GD  +     
Sbjct: 225 EGTKDGRGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVFKNAKAELCGDRKLGLIKY 284

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V  +     L     +V     +  EA  YA  R   G  +I+ P +   IA +     A
Sbjct: 285 VMALMNGARLGIMAQAVGLSEAAYREAYAYALDRKQFGKSIIEFPAIAEIIALMRAKADA 344

Query: 369 ATALSFRLANSFD-----------------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           + ++ +  A   D                 E +   + +  A    P+ K    + A   
Sbjct: 345 SRSMLYETARFVDVYKALDDISKERKLTPEERQEFKKYSKLADAFTPMGKGMTTEYANQN 404

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL------- 464
             +A++  GGSG++++ +  R YR++   +I  G+    V+  +  +  GT L       
Sbjct: 405 AYDAIQVHGGSGFMKDYACERIYRDARITNIYEGTTQLQVVAAIRHVTTGTYLNQIREYQ 464

Query: 465 ---FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---LARFLTEKIALASSAAALY 518
              ++     L+  L +  +K   ++   ++  K+++     AR + E  A       L 
Sbjct: 465 AIEYKPELEALKNKLAAMTEKYEKVV-AKVTETKDNEYIDFQARRMVEAAAHCVFGYLLL 523

Query: 519 RAGMND 524
           +    D
Sbjct: 524 QDANKD 529


>gi|62317913|ref|YP_223766.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|83269889|ref|YP_419180.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189023163|ref|YP_001932904.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|254690603|ref|ZP_05153857.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254699201|ref|ZP_05161029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732646|ref|ZP_05191224.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256255783|ref|ZP_05461319.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260545145|ref|ZP_05820966.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260756175|ref|ZP_05868523.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260760456|ref|ZP_05872804.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260763697|ref|ZP_05876029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260881999|ref|ZP_05893613.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297249154|ref|ZP_06932855.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|18092573|gb|AAL59348.1|AF454951_26 putative acyl-CoA dehydrogenase [Brucella abortus]
 gi|62198106|gb|AAX76405.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82940163|emb|CAJ13213.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           domain:Acyl-CoA dehydrogenase, N-terminal [Brucella
           melitensis biovar Abortus 2308]
 gi|189021737|gb|ACD74458.1| acyl-CoA dehydrogenase [Brucella abortus S19]
 gi|260098416|gb|EEW82290.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260670774|gb|EEX57714.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260674118|gb|EEX60939.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676283|gb|EEX63104.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260871527|gb|EEX78596.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|297173023|gb|EFH32387.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 380

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 120/349 (34%), Gaps = 25/349 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 39  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 99  ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 146 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 205 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 265 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+  
Sbjct: 319 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQ 367


>gi|241765282|ref|ZP_04763262.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241365038|gb|EER59935.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 596

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 83/440 (18%), Positives = 175/440 (39%), Gaps = 56/440 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    R+    G         F      +   I AA + +         + P +
Sbjct: 71  VTTTPGFKEAFRQYADGGWQGLQHPADFGGQGLPK--TIGAACIEMTNSANMSFALCPLL 128

Query: 157 TSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL+T  +  +   +  K+ + ++  T             + LTE + G+D+A +
Sbjct: 129 TDGAIEALLTAGSDELKATYLEKLVTGQWTGT-------------MNLTEPQAGSDLALV 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            ++ +   DG Y + G K F++    D       ++LA+V+G       +  F+VP+ L 
Sbjct: 176 RTRAEPQPDGTYKIFGTKIFITYGEHDMAENIVHLVLARVQGAPEGVKGISLFVVPKFLV 235

Query: 264 DGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +        N      +++K+G +++ T  L+F +     G+L+G  N     +  M   
Sbjct: 236 NKDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGQENRGLEYMFIMMNA 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDI 366
                 +  ++    +  +A+ YA+ R  S            +I  P +KR +  +   +
Sbjct: 296 ARYAVGMQGIAISERAYQKAVQYAKDRVQSRPVDGSINASAAIIHHPDVKRMLMTMRATV 355

Query: 367 AAATALSFRLANSF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               A++   A +F       +A +R +  A+   M P+ K +  + +  V +  ++  G
Sbjct: 356 EGCRAMATVAAAAFDAAHHHPDADTRKQNQAFYEFMVPLVKGYSTETSLEVTSLGVQVHG 415

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG- 477
           G G+IEE   A++YR++   +I  G+       L        G  + + + + +E+  G 
Sbjct: 416 GMGFIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQVAKGIAAQIEKTEGE 475

Query: 478 --SSGKKVITILRDSISLCK 495
             +SG      +   ++  +
Sbjct: 476 LLASGTPAALAVAKRLTAAR 495


>gi|254419540|ref|ZP_05033264.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185717|gb|EDX80693.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 594

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/454 (18%), Positives = 152/454 (33%), Gaps = 50/454 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            V     +   + +      L+      G  +    V   P +    R+    G      
Sbjct: 35  DVAGAVLEAAGQFSEEVLAPLNRIGDQQGSHYANGAVTAAPGFADAYRQFAAGGWTGLSA 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIF 179
                     +A ++ AA   + A   A  L      +A   +  + T      +  K+ 
Sbjct: 95  PVEVGGQALPKALEL-AAYETVHAANMAFGLCPMLSLAAIEALDQVGTEEQKVKYLTKLV 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                + LTE   G+D+ ++ +      DG Y L+G K +++   
Sbjct: 154 SGEW-------------TGAMVLTEPGAGSDLGSLITTATPNGDGTYALNGQKIYITWGD 200

Query: 240 SDA-----FIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRS 283
            DA      ++LA+  +   G   +   L            G  NG     +++K+G  +
Sbjct: 201 HDATDNIIHLVLARLPDAPKGPKGISLFLAPKFAVNDDGSLGDRNGFRPVGVEHKLGIHA 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           + T  + +      L+G  N     +  M     L   +  V     +   A+ YA  R 
Sbjct: 261 SPTCVMSYEGARAELVGRPNEGLAHMFVMMNAARLAVGVEGVGIAERAYQHALAYALDRR 320

Query: 344 VS--------GGILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEE 389
                        + D P ++R +  +    +AA A+         LA      + R   
Sbjct: 321 QGRSVWTGEANAPIFDHPDVRRMLGVMKAKTSAARAICLSTGVAADLARHAGTEEDRRRW 380

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A   +  PI K W   +   V +  ++  GG G+IEE   A++YR++    I  G+   
Sbjct: 381 KAREDLFTPIAKAWSTDVGCEVASLGVQIHGGMGFIEETGAAQYYRDARIAPIYEGTNGI 440

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK 481
             +D++   L   G      L + ++  L     
Sbjct: 441 QAMDLVGRKLSMDGGEAARALIADMKATLADLAH 474


>gi|309792197|ref|ZP_07686669.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
 gi|308225738|gb|EFO79494.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides
           DG6]
          Length = 417

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 152/398 (38%), Gaps = 35/398 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
            +L  T ++ A       P +  +   GGE  +  E  P    +L+R    GL      +
Sbjct: 17  EMLRRTVRDFAE--REVAPHIRTWDRSGGEHTEGPEDRPHIRPILKRMGELGLLGICIPQ 74

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        A  +    L  +       +   +  ++  +    +    + +       
Sbjct: 75  KYGGAGMDYLALAVVCEELERVDSFLRVVISVHTGLNSLSLFQWGSEEQKQRYLI----- 129

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMS 240
                   P  K  +  G  LTE   GTD  A+ +  ++  D  Y L+G K ++S + ++
Sbjct: 130 --------PQAKGELLAGYCLTEPNSGTDAVAMQATARRDGDA-YILNGEKIWISLADIA 180

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D F+++A+ +   G   +   + + +  G+    L  K+G R+  T  L   +    L  
Sbjct: 181 DTFLVIAKTDPTKGARGISAFIVERTMPGVSSYPLHGKLGMRAGNTGGLVLQDVRVPL-- 238

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
             N      E  KI +  LD+   +V+     L +A     + YA  RH  GG + D  +
Sbjct: 239 -ANRLGEEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASLKYAEERHSFGGPIADHQL 297

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +KR I+ +   +  +  L +R     ++ +  + E   A+  A ++ + C         +
Sbjct: 298 VKRMISHMVRKLDTSRLLVYRAGWMKNQGQRNTRETTLAKWHATVSSFEC-------ADD 350

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A++  G  GY +E  + R+ R +    I  G+     L
Sbjct: 351 AIQIHGAYGYSDEYPVERYLRNARGGIIYEGTRELQEL 388


>gi|158392727|dbj|BAF91137.1| acyl CoA dehydrogenase [Pseudomonas putida]
          Length = 383

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 143/399 (35%), Gaps = 41/399 (10%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA--LLRRSIHDGLHCSIWDRSFEPV 127
            +++AR    N        P  + W+K      W    ++ R    GL   +    +   
Sbjct: 13  IRDMARDFARNE-----IAPHAQAWEKA----GWIDDGVVARMGELGLLGMVVPEQWGGS 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPT 186
                    A           G LMS   +      L   +    + W  ++ +      
Sbjct: 64  YTDYVAYALAVEEIAAGDGATGALMSIHNSVGCGPLLAYGSDLQQQTWLERLATG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IM 245
                    V     LTE + G++   + ++ +++ D  + ++G K F S+       I+
Sbjct: 119 --------QVIGCFCLTEPQAGSEAHNLRTRAERVGDE-WVINGSKQFASNARRAGLAIV 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  +  +G   +   L      G    R ++K+G R++ T  +  +N        L   
Sbjct: 170 FAVTDPELGKKGLSAFLVPTDNKGFVVDRSEHKMGIRASDTCAVTLNNCRVPAANLLGER 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +     L  L+   + ++   + +       A+ Y+R R   G  + +   +   +A
Sbjct: 230 GKGL--AIALSNLEGGRIGIAAQALGIARAAFEAALAYSRDRIQFGKPINEHQSVANLLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ + + AA  L    A      K    EA  A       K +  +MA  V ++A++  G
Sbjct: 288 DMQVQLNAARLLILHAARLRSAGKPCLSEALQA-------KLFASEMAERVCSKAIQVHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+E+  + R+YR++    I  GS     + +   L+
Sbjct: 341 GYGYLEDYPVERYYRDARITQIYEGSSEIQRMLIARELK 379


>gi|156742430|ref|YP_001432559.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233758|gb|ABU58541.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 381

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 136/373 (36%), Gaps = 33/373 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGH 150
           FH  W         L R +   G  C      +     +           L         
Sbjct: 28  FHAEWERAGAVPRDLWRSAGRQGFLCMDAPEEYGGAGARDYRFNVVIGEELWRIGATGPG 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  S      +    T   H+ W P   S E                 + +TE   G+D
Sbjct: 88  FVLHSDIVVPYLLCYGTSEQHRRWLPGCVSGEC-------------ITAIAMTEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +AAI +   +  D  Y L+G K F+S+ + +D  I+ A+ +   G   V  L+ +    G
Sbjct: 135 LAAIRTTALRDGDA-YVLNGQKTFISNGILNDLVIVAAKTDPDRGAKGVSLLVVERGMPG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R   KIG  +  T EL F N       LLG+       + +      L  A+ +V+
Sbjct: 194 YERGRRLEKIGLHAQDTAELFFHNVRVPRENLLGEEGQGFRYLMEQLPRERLAIAVGAVA 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +L + I Y R R V G  L     ++  +A++A ++        +   + +  +  
Sbjct: 254 AAETALEQTIRYCREREVFGRPLGALQTVRFTLAELATEVQIGRVFVDQCVLALNRGELT 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +E AA A+        W  ++   V+   ++  GG GY+ E  IAR + ++   +I  G+
Sbjct: 314 AETAAMAKW-------WTTELQQRVVGACLQLHGGYGYMREYPIARAFLDARVQTIYGGT 366

Query: 447 GNAMVLDVLNLLE 459
              M   +   L+
Sbjct: 367 TEIMKEIIGRSLK 379


>gi|111019618|ref|YP_702590.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819148|gb|ABG94432.1| probable long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii
           RHA1]
          Length = 380

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 122/361 (33%), Gaps = 29/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV----RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           AL   +   GL       ++        R  A  +        A       +   V    
Sbjct: 40  ALFTDAGKQGLLGFPVPEAYGGPGVEDFRYNAIVVDEVNRVGAAAAGIAFSLQNDVVL-P 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  MTT      W P   + E               +G+ +TE   G+D+  I +   +
Sbjct: 99  YLTDMTTEEQKARWLPGTVTGE-------------TILGIAMTEPGTGSDLTGIRTTAVR 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D  Y ++G K F+S+  +    ++A          +  L+ +    G    R   KIG
Sbjct: 146 DGDH-YVVNGSKTFISNGQNGTLFVVAVRTSADKHKGLSLLVVESDTPGFSRGRNLEKIG 204

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T EL F++       LLG+       +        L  ++ +VS     L + + 
Sbjct: 205 LHAQDTSELTFTDMRVPVANLLGEEGQGFYQLVHNLPQERLSLSVGAVSAAEGVLEQTLE 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +      +  +A++A ++  A              +     AA  +   
Sbjct: 265 YVKERSAFGKPIAGFQNTQFVLAELATELDLARTYLDDCIRQHVRGELTPARAARLKW-- 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W  ++   V    ++  GG GY+ E ++AR + +S   +I  G+   M   V   
Sbjct: 323 -----WTTELQVRVADRCLQLHGGYGYMREYAVARAFVDSRIQTIYGGTTEIMKTIVAKD 377

Query: 458 L 458
           L
Sbjct: 378 L 378


>gi|120401921|ref|YP_951750.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954739|gb|ABM11744.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 140/374 (37%), Gaps = 26/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W++        +    +   GL        +                    +  A
Sbjct: 27  PNAQKWEEAGIVD--RSAYTAAGRYGLIGFNMPEEYGGGGSDDF------------RFNA 72

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +       AL     +   +   + +RE             +   + ++E   G
Sbjct: 73  VVVEELAKFGFLTPALSVHNDIVGPYLKDLATREQQERWLPGYAAGELIGAIAMSEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+A I +   +  D  + L+G K F+S+ + SD  I++A+ +   G      L+ +   
Sbjct: 133 SDLAGIRTTAVRAGDD-WILNGSKTFISAGINSDLVIVVARTDPDAGHKGFSLLVVERGM 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R  +K+G  +  T EL F++       LLG+ N     +        L  AI +
Sbjct: 192 PGFERGRKLDKMGQPAQDTAELHFTDVRVPATNLLGEQNRGFYHLMANLPSERLSIAIAA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V+G R +  + + YA+ R   G  +      +  +A++  ++  A     R   +  +  
Sbjct: 252 VAGARETYRQTLQYAKDRTAFGQSIGSFQHNRFVLAELDTELDIAEQYVDRCLQALLDQD 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + +AA A+        WC ++A  V+   ++  GG GY+ E  +A+ Y ++   +I  
Sbjct: 312 FSAVDAAKAKW-------WCTELAKRVVDACLQLHGGYGYMNEYKVAKDYVDTRIQTIYG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   V   L
Sbjct: 365 GTTEIMKDIVGRSL 378


>gi|325001281|ref|ZP_08122393.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 387

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 128/359 (35%), Gaps = 26/359 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL           +         A        +    ++     S  M+A   T    + 
Sbjct: 49  GLFGLAVPEEHGGLGADTVSFGLAFEEISRGWMGIAGILGSHSVSCFMLARHGTEEQKQR 108

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + S              +   G+ LTE   GTD+  I +  ++  D         W
Sbjct: 109 YLPDLASG-------------TRRTGIALTEPGAGTDLQGIRTTARRDGDDYVVNGTKMW 155

Query: 234 FLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             ++  +D   +L + +         +  LL +    G        K+G +   + E+  
Sbjct: 156 ITNARHADPLPVLVKTDPSAEPAHKGMSILLVEADSPGFEVTADIGKLGYKGTESCEVVL 215

Query: 292 SNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           ++        L      G  + +  L    ++ A  SV   + +  EA++YAR R   G 
Sbjct: 216 TDVRVPASQLLGGVEGRGLQQALSSLETGRINIAARSVGIAQRAYDEALNYARERTAFGR 275

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   +++ +A IA+ + AA  +++  A+  D+      E+  A+I       +  + 
Sbjct: 276 PIGEFQAVEQRLAQIAVRLQAARLMTYWAASRMDDGVRMDTESGMAKI-------FASEQ 328

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           A     ++M   GG GY  E  I R YR++P  SI  G+ + +   V   L  G     
Sbjct: 329 ALECAIDSMRIHGGYGYSTEFEIERLYRDAPLMSIGEGTNDVLRGVVAKALLSGKATVR 387


>gi|68536548|ref|YP_251253.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577688|ref|ZP_05845623.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264147|emb|CAI37635.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604083|gb|EEW17325.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 391

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 148/379 (39%), Gaps = 22/379 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +RW +  +      + +++   GL   +    F     +  ++  A     +A+ ++
Sbjct: 31  PNVDRWHEQGYCD--REMFQKAGQQGLLGMMAPEQFGGGGMENDYRFNAVLTEELAKADS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +         +V + T   +   +  +  + +       P+        L +TE   G
Sbjct: 89  GSV---------IVGIQTINDLVIPYLQRFGNDDQKERFLKPLCAGEKIAALAMTEPGAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            D+A I +  +K  +G Y ++G K F+S+ + +D  +++       G   V  L+ +   
Sbjct: 140 ADLAGIRTFAKKDENGDYIVNGAKTFISNGVQADFTLLVVVTNPEKGRAGVSMLIVEDGM 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G        K+G +S  T EL F +T      LLG+   + G +        L  A+ S
Sbjct: 200 EGYTKTGPLKKVGLKSQDTAELSFEDTRVPKENLLGEEGAAFGYLRTNLAQERLSIAVGS 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  R +      +++ R   G  LID    +  +A +A +I  + +         D   
Sbjct: 260 IATSRRAFDLVYKHSQDRKTFGQRLIDHQAYRWELAKMATNIQGSQSFV-------DACI 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     +   + KY   ++   V+ EA++  GG G++ E  I+ HY +S    I  
Sbjct: 313 MEKVNGTLDEVTGAMAKYQTTELQIEVVNEALQLHGGYGFMLEYPISTHYLDSRVQPIYG 372

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G    M+  +   L KG N
Sbjct: 373 GPNEIMIEIISRRLAKGEN 391


>gi|187927215|ref|YP_001897702.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|241661736|ref|YP_002980096.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|309780086|ref|ZP_07674838.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724105|gb|ACD25270.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240863763|gb|ACS61424.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|308921118|gb|EFP66763.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 385

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 143/377 (37%), Gaps = 26/377 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W+  E  PA   L ++    G         F  +    +        Y MA  
Sbjct: 22  INPYVDEWEAAEMFPA-KQLFKKMGELGFLGIAKPTEFGGLGLDYS--------YAMAMA 72

Query: 147 EA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           E  GH+    V  A  V   M TP + +       S E      AP         +G++E
Sbjct: 73  ETLGHIHCGGVPMAIGVQTDMATPALARFG-----SDELRAQFLAPAISGDAVACVGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A+I +  +K  D         W  +S  +D   +LA             ++  
Sbjct: 128 PSAGSDVASIKTTARKDGDDYIINGSKMWITNSLQADWMCLLANTSDDPAHRNKSLIIVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
            +  G+   +   KIG  S+ T  + F +      + +G+                L +A
Sbjct: 188 MNTKGVSVGKKIRKIGMNSSDTGLIYFDDVRVPQRYRIGEEGKGFTYQMLQFQEERLWAA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S++ M + +     YAR R + G  L+D   +   +A++  ++ A  AL++R  + + 
Sbjct: 248 ASSLATMTMCIETTAEYARERKLFGASLLDNQWVHFKLAELKTEVEALRALTYRACDLYI 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  +E       +A + K    ++A  V    ++  GG G+  +  ++R+YR+    S
Sbjct: 308 QGQDVTE-------LASMAKLKAGRLARIVPDACLQFWGGMGFTWDNPVSRYYRDGRLGS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +   +
Sbjct: 361 IGGGADEVMLGIICKYM 377


>gi|183983822|ref|YP_001852113.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium marinum M]
 gi|183177148|gb|ACC42258.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium marinum M]
          Length = 388

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 135/374 (36%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEYGGMGGDYFALALALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +           W P + +                  G GLTE   G+D  +
Sbjct: 95  GVGLGAMPIYRFGNEEQKSKWLPDLLAG-------------RALAGFGLTEPGAGSDAGS 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNG 269
             +  +    G + ++G K F+++  +D    + +  V G +  G   +  ++      G
Sbjct: 142 TRTTARLDG-GEWVVNGSKQFITNSGTDITSLVTITAVTGSIADGKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              + + NK+G  ++ T  L F +        L +      +   L  LD   ++++ + 
Sbjct: 201 FIVEPVYNKVGWNASDTHPLSFDDARVPEENLLGIRGKGYANF--LSILDEGRIAIAALA 258

Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             +A     E++ YA+ R   G  +     +   IA +      A    +  A      K
Sbjct: 259 TGVAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYEAAAKMLAGK 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A+++         + A     +A +  GG G++ E  +ARHYR+S    I  
Sbjct: 319 PFKKEAAIAKMI-------SSEAAMDNARDATQVHGGYGFMNEYPVARHYRDSKILEIGE 371

Query: 445 GSGNAMVLDVLNLL 458
           G+    ++ +   L
Sbjct: 372 GTTEVQLMLIARSL 385


>gi|307324577|ref|ZP_07603784.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306889821|gb|EFN20800.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 388

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 145/408 (35%), Gaps = 39/408 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  +  E H   + ++R     GL    + 
Sbjct: 4   DHRLSPEHEELRRTVEAF-----AHDVVAPKIGEYWEHHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFS 180
             +  +         A              +   V+   M + L  T    + W P + S
Sbjct: 59  EEYGGMGGDYFALCLALEELARVDSSVAITLEAGVSLGGMPIFLYGTEEQKRTWLPGLCS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D  A  +  +     G + ++G K F+++  
Sbjct: 119 GE-------------TLGAFGLTEPGGGSDAGATRTTARLDETTGEWVINGTKCFITNSG 165

Query: 240 SD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D  A + +  V GR   G   +  ++      G       +K+G  ++ T EL F++  
Sbjct: 166 TDITALVTVTAVTGRKEDGRPEISSIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADCR 225

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
                 L            L  LD   +++S +   LA     E++ YAR R   G  + 
Sbjct: 226 VPAANLLGAEARGYAQF--LRILDEGRIAISALATGLAQGCVDESVAYARTREAFGRPIG 283

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  +AD+ +    A       A+     +   +E       A I K +  ++A  
Sbjct: 284 ANQAIQFKLADMEVRAHMARVAWRDAASRLVLGEPFKKE-------ASIAKLYSSEIAVD 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 337 NAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|262278424|ref|ZP_06056209.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262258775|gb|EEY77508.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 381

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 131/380 (34%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWNQLGENGYLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YVLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LADTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R ++     Y + R   G  +      +  +A   +D  A  A   R   
Sbjct: 245 AIASTAIGAIRGAIDLTTAYVKERQAFGQPISQFQNTRFVLAQAKIDELATAAFYERNIA 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + E K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYQEGKLDVETAA-------ALKSFSSDMQMKVADNLLQLFGGYGYMTEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARGL 377


>gi|321471154|gb|EFX82127.1| hypothetical protein DAPPUDRAFT_49331 [Daphnia pulex]
          Length = 391

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 136/400 (34%), Gaps = 43/400 (10%)

Query: 70  AQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q+LAR  + +   P    +   G      E+      ++++    GL        +   
Sbjct: 15  VQQLARQFSRSEILPAAAHHDKTG------EYP---WEIIKKVHALGLMNHHIAEEYGGS 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                        +          +  +      V L       K +  ++         
Sbjct: 66  DVGSFESAMIMEEFGYGCTGISTAIDCNNLGQIPVVLAGNHEQKKKYLGRMIDE------ 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                   +     +TE   G+D+A+I ++ +K  D         W  +   ++ + +LA
Sbjct: 120 -------PLMCAYCVTEPGAGSDVASIQTKAEKKGDDYVLNGQKMWITNGGHANWYFVLA 172

Query: 248 QVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +            +   + D    GL   R +  +G R++ T  + F +    L+   NV
Sbjct: 173 RTNPDPKAPPHQSLTGFIVDRHTPGLTPGRKEINLGQRASDTRGITFEDV---LVPKENV 229

Query: 305 STGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
             G     KI +   D         +V   + +L EA  YA RR+  G  ++   ++   
Sbjct: 230 LIGEGAGFKIAMGAFDRTRPTVASGAVGLAQRALDEATQYATRRYTFGVPIVKHQLIMGM 289

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A++I  +     R A   D+ +  +         A I K     +A     +A++ 
Sbjct: 290 LAEMAMNIELSRLAWMRAAWETDQRRRNT-------YYASIAKAMAADVANKCATDALQI 342

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG+GY  E  I +  R++    I  G+     L +   L
Sbjct: 343 FGGNGYNTEYPIEKLMRDAKIYQIFEGTAQIQRLIIAREL 382


>gi|194207390|ref|XP_001497106.2| PREDICTED: similar to long-chain acyl-CoA dehydrogenase [Equus
           caballus]
          Length = 439

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 130/380 (34%), Gaps = 39/380 (10%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         L  ++   GL           V                +     
Sbjct: 77  IPHHAEWEKAGEVSRELWEKAGKQGLLGVNVAERHGGVGGDVYAAAVVWEEQAYSNCTGP 136

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +A   +    K + P++ +                   + +TE   G+
Sbjct: 137 GFSLHSNIVMPYIANYGSEEQIKHFIPQMTAGRC-------------IGAIAMTEPGAGS 183

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++   SD  I++A  +   R     +   L +  
Sbjct: 184 DLQGVRTNARKDGSD-WILNGSKVFITNGWLSDVVIVVAVTDREARSPAHGISLFLVENG 242

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE----DMKILIY-L 318
             G    R  +K+G ++  T EL F +       LLG+ N     +      ++ LI+ L
Sbjct: 243 MKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMRELPQVRNLIFGL 302

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A + +S       E   Y ++R   G  +     ++  +A++   I    A       
Sbjct: 303 LIADLGISASEFMFEETRTYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDSCLQ 362

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +  +  S  A+ A       KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++ 
Sbjct: 363 LHEAGRLDSATASMA-------KYWTSELQNSVAYDCVQLHGGWGYMWEFPIAKAYVDAR 415

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   +   +
Sbjct: 416 VQPIYGGTNEIMKELIAREI 435


>gi|294499119|ref|YP_003562819.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
 gi|294349056|gb|ADE69385.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551]
          Length = 592

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/445 (18%), Positives = 167/445 (37%), Gaps = 39/445 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P     ++ +F+     L+ ++   GL       ++  +   +  K     +       
Sbjct: 49  DPYHNDIEQQDFNKV-VELMHKAGELGLLAHSIPETYGGLGLDKVSKGLVGEIIGRTSGY 107

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +  +   +    T    + + PK+ S EY                  LTE   
Sbjct: 108 GVAHSNHTCIATLPITYFGTKEQKEKYLPKLASGEY-------------IGAYCLTEPEA 154

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D  A  ++     +   Y L+G K ++++   SD FI  A+V+G          + + 
Sbjct: 155 GSDALAAQTKAVLNPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEH----FTAFIVEK 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAI 322
              GL     + K+G + ++T  + + +    +   L  V  G +  +    L   +   
Sbjct: 211 GFEGLSLGPEEKKMGIKGSSTRPVIYEDCLVPVENVLGQVGKGHLIALNVLNLGRFNLGS 270

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   + +   A+ Y + R      + +    K  IA +A  I A+ ++ +R A   +E
Sbjct: 271 ACMGAAKYAFELALAYTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEE 330

Query: 383 A----------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           A          K  +++ A   +   + K +  +    +  EA++  GG+G+I+E  I +
Sbjct: 331 ALGGLYESENHKLVAKQLAEFAMECSVCKVYGSETLDLIADEALQLHGGAGFIQEYKIEQ 390

Query: 433 HYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            YR+S  N I  G+     L +   LL+K      +L   +E  +         I  + +
Sbjct: 391 VYRDSRINRIFEGTNEINRLLLPTQLLKKADKGEIELSKQVEHAVSELMSGQWEISSNEL 450

Query: 492 SLCKEDKGL--ARFLTEKIALASSA 514
            L +E + +   R L   +AL  +A
Sbjct: 451 -LAREKQAVITTRHL--FLALLGTA 472


>gi|83648391|ref|YP_436826.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636434|gb|ABC32401.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 391

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 142/370 (38%), Gaps = 23/370 (6%)

Query: 94  WDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D+ E   A+    + ++    GL        +  +    ++ + AA   L A    G  
Sbjct: 26  IDEWEKAGAYPMREIFKKLGDLGLLGIHKPEEYGGLGLDYSYNLAAAE-ELGACGAGGVP 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +S  V +        TP + +       S E      AP  +  +   +G++E   G+D+
Sbjct: 85  LSIGVQTDMC-----TPAIARFG-----SHELKSEFLAPAIRGEMIGCIGVSETSAGSDV 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A + +  +K  D         W  +SP +D   +LA             ++   +  G+ 
Sbjct: 135 AGLKTSARKDGDDYVINGSKMWITNSPQADFMCLLANTSDDKPHKNKTLMVVPMNLPGIE 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
                +K+G RS+ T ++ F +        +     G +  M       +  A  ++  +
Sbjct: 195 VAPHLDKLGMRSSETAQVFFDDVRIPQRYRIGAEGMGFMMQMVQFQEERMWGAANTIKAL 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + + I Y R R   G  LID   +   +A++  +I A  AL+++    + + K  ++
Sbjct: 255 EACVNQTIAYCRERKTFGQPLIDNQYIHFRMAELQTEIEALRALTYQACELYIQGKDVTQ 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  +A + K    ++   V    ++  GG GY+ +  ++R +R+    SI  G+  
Sbjct: 315 -------LASMAKLKAGRLGREVTDSCLQYWGGMGYMWDNPVSRAFRDVRLVSIGGGADE 367

Query: 449 AMVLDVLNLL 458
            M+  +  L+
Sbjct: 368 IMLGIICKLM 377


>gi|114797804|ref|YP_761489.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114737978|gb|ABI76103.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 386

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 125/361 (34%), Gaps = 31/361 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +    +   + A  L   +        +     +  + L  T   
Sbjct: 46  ELGLFGIAVPEEYGGLDLDMETECLVAMELGQTSPAFRSVAGTNIGIGSQALILFGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P + S               +     LTE   G+D A + ++  +  D       
Sbjct: 106 KQKWLPGVASG-------------DLIASFALTEPEAGSDAAGLKTKAVRDGDHYILNGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++  +D F ++A+      G   V   + +    GL   + + K+G +     ++
Sbjct: 153 KRYITNANKADLFTVMARTNQDEPGAKGVSAFIVERDTPGLSVGKPEKKMGQQGAHICDV 212

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRH 343
            F N         N+     E  K+ +  LD   + +S +        + E ++Y+  R 
Sbjct: 213 IFENARVPA---ANMIAKEGEGFKVAMSVLDKGRLHISAVATGVSKRLIREMVNYSLERK 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +  +++  IAD   +  AA  +    A   D  +  +       ++A  TK +
Sbjct: 270 QFGKPIFEHQMLQALIADSQAETYAAECMIMDAARRRDAGEDIT-------MLASCTKLF 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +    V   A++  GG+GY+ +  I R YR+     +  G+     + +   L +   
Sbjct: 323 ATEACGRVADRAVQIFGGAGYVSDYGIERFYRDVRIFRLYEGTSQIQQIIIARELARAAK 382

Query: 464 L 464
            
Sbjct: 383 A 383


>gi|284164436|ref|YP_003402715.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284014091|gb|ADB60042.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 380

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 138/377 (36%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  +     PA   +  +     +     D  +  +      + + A  L  ++   
Sbjct: 26  PIAQEIEDEHRFPA--EVFDQLADLDMMGVPIDEEYGGLGGDTLMYVLVAEELGRVSGSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++ +  ++  +    T    + W   +   E+               G  LTE   
Sbjct: 84  GLSYVAHTSLASKPIEQFGTRSQKERWLRPLAEGEH-------------LGGWALTEPDS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           G+D + + +  +K  D        ++  ++  + + ++ A  +   G   +   + D   
Sbjct: 131 GSDASDMDTTAEKDGDEWVLNGTKQFITNASEAGSILVKAVTDPDAGYDGISTFIVDPRE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            +G     + +K+G  ++ T E+   N        L       +  K    LD   +S++
Sbjct: 191 DDGFEVTTVWDKMGLNASPTCEIRLENVRLPEDRLLGEEGEGWDQTK--KTLDGGRISIA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +   LA+     A  Y++ R   G  + +   ++  I D+      A  L+ R A ++D
Sbjct: 249 ALSTGLAQGAYEHAREYSKEREQFGQPICEFDAIRDKIVDMHRKTERARLLTHRAARTYD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + E+A A++ A        + A  V  +A++ +GG GY  + +  R YR++    
Sbjct: 309 KGEPVTRESALAKLDA-------SEAAREVAEDAVQVLGGYGYTTDFAPQRFYRDAKLME 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 362 IGEGTSEIQHLVIGREL 378


>gi|187929709|ref|YP_001900196.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187726599|gb|ACD27764.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 593

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/450 (18%), Positives = 162/450 (36%), Gaps = 52/450 (11%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIW 120
            ++    QE A  A      L       G RW      PA  +         +G +    
Sbjct: 36  DLVEAILQEAANYAAGVLDPLNRPGDVQGARWHDGRVTPADGFREAWASFCENGWNGMPA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +               ++  + L        ++ +   +A   +  + + +      
Sbjct: 96  ATEWGGQGLPTLVSTAVLEMWKSSNLAFSLCQMLTLGAVEAIAHHGSDALQRRFL----- 150

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                   APM +      + LTE + G+D+AA+ S+     D  Y +SG+K F++    
Sbjct: 151 --------APMVEGRWTGTMNLTEPQAGSDLAALRSRAVHEGDH-YHVSGNKIFITWGEH 201

Query: 241 D-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+  +   G   +   L            G  N L    +++K+G   +
Sbjct: 202 DMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLGERNDLACTSIEHKMGIHGS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F +     G+L+G+ +     +  M     L+  +  V     +   A  YA  
Sbjct: 262 PTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGISERAYQRARAYALE 321

Query: 342 RHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSE 388
           R   G         +   P ++R + D+     A  AL++  A   D      +A+ R++
Sbjct: 322 RVQ-GKPLISGSTAIAGHPDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHADAQERAQ 380

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A   ++ P+ K WC   A  + ++ ++  GG GY+EE   ++H R++   +I  G+  
Sbjct: 381 AQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGASQHMRDARITTIYEGTTG 440

Query: 449 AMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
                L    L  +G    + L   ++ D 
Sbjct: 441 IQANDLIGRKLAREGGRTLKALLGRIDGDA 470


>gi|260906698|ref|ZP_05915020.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 383

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 138/399 (34%), Gaps = 33/399 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S   +E+ R A  N  +     P     D    +P         +      +        
Sbjct: 9   SEEHEEI-RAAVRNVVE-KKITPFAAEVDADSRYP--QEAHDALVETDFFAAHIPEEHGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                    +  + + +   +  V L  +  +   + P++   E    
Sbjct: 65  MGADALAVAIIIEEVARGCASSSLIPAVNKLGSMPVQLGGSEEIKAKYFPQVARGE---- 120

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GL+E+  G+D A++ ++     D         W  ++ +S+ + ++
Sbjct: 121 ---------AGFSYGLSEREAGSDTASMKTRAVADGDDWILNGVKTWITNAGVSEYYTVM 171

Query: 247 AQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A  +        +   + + S  G  +   + K+G + + T EL F N     L    + 
Sbjct: 172 AVTDPDGARGRNISAFVVEKSDEGFTFGEKERKLGIKGSPTRELLFDNVR---LPGDRII 228

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
             P E +KI +  LD   ++++   V +A+     AI Y + R   G  + +   ++  +
Sbjct: 229 GDPGEGLKIALRTLDHTRVTIAAQAVGIAQGALDYAIGYVKERQQFGKNIAENQAIQFML 288

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + + AA  L++  A                       K +    A  +  +A++ +
Sbjct: 289 ADMGMKLEAARQLTYTAAAKSQRMDED------LTYFGAAAKAFASDAAMEITTDAVQLL 342

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+GY+ +  + R  R++    I  G+     + +   L
Sbjct: 343 GGAGYVVDHPVERMMRDAKITQIYEGTNQIQRMVMGRKL 381


>gi|188577058|ref|YP_001913987.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae
           pv. oryzae PXO99A]
 gi|188521510|gb|ACD59455.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae
           pv. oryzae PXO99A]
          Length = 382

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 150/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVDYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   S    + +    +    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIVSVNSSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   +L     V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  +  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 227 GVEGEGFRTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + ++   EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWLKGQGQTFGTEAAVAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|45657228|ref|YP_001314.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45600466|gb|AAS69951.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 586

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 161/431 (37%), Gaps = 47/431 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-P 154
           KV F       + +  + G+      R    +       ++   L L ++ +    ++  
Sbjct: 95  KVTFPETMIKGIEQVKNSGILPYSIGRKHGGLGVPA--TVQCMMLELFSRADGSFAIALG 152

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +  A  +    +  +  ++ PK+ + E                 + LTE   G+D+  +
Sbjct: 153 CLNLAETIERFGSKEMIDEYVPKMANGEIFG-------------AMALTEPNYGSDLPNL 199

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
            ++  K  +GI+ L+G K F++            + LA+      G   +   L   S  
Sbjct: 200 QTKAIKDENGIWKLTGTKRFITHGCGFANIPAVILTLARTGTPTSGARGLSFFLVKSS-- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSG 327
            +    ++ K+G   + T E+ + NT G L+G+           M     L  A  ++  
Sbjct: 258 DVFIAGIEKKMGLHCSPTCEVVYENTPGILIGEEGYGLVRYSMAMMNGARLSIAAQAMGI 317

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +  EA  YA  R   G  + + P + + ++ +  +IA   A+    + S D    +S
Sbjct: 318 ATAAYMEAKKYASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKS 377

Query: 388 E--------------------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           E                        A +  P++KY+  ++A  +  +A++  GG+G+  +
Sbjct: 378 ERMRENGIEEREIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYD 437

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVIT 485
             ++R YR+    +I  G+    V+  +  +  G +    L    E++      G  ++ 
Sbjct: 438 YDVSRIYRDVRITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKIGGGSTLLN 497

Query: 486 ILRDSISLCKE 496
             +DS+    E
Sbjct: 498 ENKDSLEKIVE 508


>gi|146305420|ref|YP_001185885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573621|gb|ABP83153.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 596

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/464 (18%), Positives = 164/464 (35%), Gaps = 53/464 (11%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +  +V     +    R+ + +G         +      Q        + + A 
Sbjct: 59  DEEGCRLENGQVSTPRGFAEAYRQYVDNGWASMTGPVEYGGQGFPQLVAFAFHEMLMGAS 118

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L        +  +   +    +  + + +  K+ S ++  T             + LTE 
Sbjct: 119 LSFRVYSGLTEGAVLALHKHGSETLKQQYLGKLVSGQWSGT-------------MCLTEP 165

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVP 259
           + GTD+A + ++ +  +DG Y +SG K F+S    D       ++LA+  +   G   + 
Sbjct: 166 QAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEQDLSENIVHLVLARLPDAPAGVKGIS 225

Query: 260 RLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            LL            G  N L    +++K+G +  +T  + F    G+L+G+ N     +
Sbjct: 226 LLLVPKFIAAADGTPGERNTLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQGLACM 285

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M         +  +     +   A+ YAR R  S G             +I  P ++R
Sbjct: 286 FTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPDKAADPIIVHPDVRR 345

Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +      +  +  L+   A   D       A +R      A ++ PI K +   M   V
Sbjct: 346 MLLTQKTLVEGSRMLAAYTARQLDLEHGAESADARKAAGKRAALLIPIVKAFFTDMGQEV 405

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
            +  ++  GG G+I E  + +  R+S    +  G+     LD +   LL  G      L 
Sbjct: 406 ASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQ 465

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
           +          +     L++  ++ +   G  R L+ ++  A  
Sbjct: 466 AEFSALC--DAQTTRPALKEMATVVQARIGEWRELSTEVLAACQ 507


>gi|134106811|ref|XP_777947.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260647|gb|EAL23300.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 416

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 138/401 (34%), Gaps = 30/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                  AQE  R    +  Q     P     D+    P    +  +    GL       
Sbjct: 30  AVAGLTEAQEEFRSVVQHFAQ-KEIAPRAAEIDRTNKLP--QDIFPKLGEMGLLGVTVPE 86

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +      H I    +   +   A    + S    + +    T +    + P + + 
Sbjct: 87  RWGGLGLGYLEHTIAMEEISRASASVALSYGAHSNLLVNQLVRWGTEKQLSKYLPPLLTG 146

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239
           ++                L ++E   G+D+ ++ +   +    +G        W  ++P+
Sbjct: 147 KH-------------IGSLAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPV 193

Query: 240 SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           S  F++ A+ +  V     +   L +    G       +K G R + T EL F N     
Sbjct: 194 SSTFLIYAKSDTNVAPSKGMTAFLVEKGWKGFEVGEGLDKFGMRGSPTAELFFDNVKIPE 253

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L         +   + L+  ++S   +  M+ +L  A+ Y   R   G  +    +M
Sbjct: 254 ENVLGKVGNGALVLMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLM 313

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   ++A+ A  + +A + D       + A A         +    A  V  EA
Sbjct: 314 QGKLADMYTKLSASRAYVYAVARACDAGMISRRDCAGA-------ILYSSDRAVEVAIEA 366

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +C+GG+GYI +    R  R+S   ++  G+     + +  
Sbjct: 367 QQCLGGNGYINDYPAGRLVRDSRLYTVGAGTQEIRRMLIGR 407


>gi|108743508|dbj|BAE95610.1| putative acyl-CoA dehydrogenase [Streptomyces kanamyceticus]
          Length = 401

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 129/379 (34%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++ + E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKETFLPRMAAGE-------------VRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+G K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKGVKDGDDYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGATGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|325268819|ref|ZP_08135444.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608]
 gi|324988791|gb|EGC20749.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608]
          Length = 577

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 85/474 (17%), Positives = 170/474 (35%), Gaps = 52/474 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            V +    + A   +   P L          +++ +       +  +   GL      R 
Sbjct: 60  DVAANIIAQNAEAVDQEGPHLID--------NRMHYASKTLENIEATRQAGLWGVSMPRR 111

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +  +          + +   A     ++ S        +         + + P+I + E 
Sbjct: 112 YGGLNLPNVVFSMLSEVIAAADAGFQNIWSLQSC-IDTLYEFGNEEQRQKYIPRICAGE- 169

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDA 242
                         + + LTE   G+D+  +  +      +  + L+G K F+++  SD 
Sbjct: 170 -------------TMSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDI 216

Query: 243 FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    L G+
Sbjct: 217 HLVLARSEEGTRDGRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCGN 276

Query: 302 LNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             +     V  +     L  A  SV   + +  E + YA+ R   G  +I  P +   ++
Sbjct: 277 TRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLS 336

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA-----------------YARIMAPITKYW 403
            +   + A  +L ++ A   D  K+  + A                   A    P+ K  
Sbjct: 337 RMKAKLDAGRSLLYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGI 396

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  +  GT 
Sbjct: 397 NSEYANQTAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTY 456

Query: 464 LF---EQLFSTLEQDLGSSGKKVITIL----RDSISL--CKEDKGLARFLTEKI 508
           L    E L   L  D   + +  +  L    ++++      E++ +  FL  ++
Sbjct: 457 LSIMKEMLEDELACDCMKALRDRVARLVRLYQEAVEKVNAGENQDVHDFLARRL 510


>gi|118462334|ref|YP_884188.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118163621|gb|ABK64518.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 383

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 141/392 (35%), Gaps = 37/392 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A    P  H +       D+  F         R+   G++       +           
Sbjct: 21  LAREVVPFQHDWDRD-RWIDRAVFP--------RAAKAGIYALQVGEEYGGAGESDYRYR 71

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                 +         ++ S+    ++  +   T     + W P   + E          
Sbjct: 72  MVVCEEVSRVTALSFGLTISLQDDLVLHYLLDLTNDEQKQRWLPGFAAGE---------- 121

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG 251
              +   L +TE   G+D+  + +   +  D  + L+G K F+SS  M+D  ++ A+ + 
Sbjct: 122 ---LIGALAMTEPGAGSDLRGMRTTAHRDGD-QWILNGQKTFISSGIMADVVVVAARTDP 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G       + +    G    R  +KIG  +  T EL F +       LLG +      
Sbjct: 178 NGGSGAFSLFVVERDTPGFERGRKLDKIGLPAQDTAELYFRDAQVPGANLLGTVGEGLRY 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L     S++  R      + Y ++R   GG L D+  ++  +A++A +I  
Sbjct: 238 LMSHLPRERLGVTAKSLATTRAIFDTTVEYCQQRMAFGGPLTDKQHIRFELAEMATEIDV 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A A   +   +++  +  + +AA  +        +  ++   VI   ++  GG GY+ E 
Sbjct: 298 AEAYVDKSVLAYNAGELTAVDAAKGKW-------YLSELQKRVIDRCLQLHGGYGYMTEY 350

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +AR Y ++   +I  G+   M   +   + K
Sbjct: 351 PVARAYLDTRIQTIYGGTTEIMKEIIGRDIAK 382


>gi|226361194|ref|YP_002778972.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239679|dbj|BAH50027.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 139/396 (35%), Gaps = 39/396 (9%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +  +  PQL  +       D++     W A    +   GL        F     +  +
Sbjct: 19  GFVDKHVVPQLEKWDA-----DRLIDRETWLA----AGRQGLLGLTVPEEFGGPG-ELDY 68

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKA 189
           + R      +A++ A  L S   T+  +V             + W P   + E       
Sbjct: 69  RFRVVIQQEIARVGASALQSGFSTNDDIVLNYLLRHANEEQRRRWLPGFVTGE------- 121

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248
                     + ++E   G+D+ AI +      D  + ++G K F++S + +D  I+ A+
Sbjct: 122 ------TIGAIAMSEPAAGSDLRAIQTTAVADGD-TWVINGSKTFITSGILADLVIVFAK 174

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
            +   G       + +    G    R  +K+G  +  T EL F +       LLG++   
Sbjct: 175 TDSAAGSRGFSLFVVEDGTPGFARGRKLDKLGLHAQDTAELFFEDVRVPKENLLGEVGSG 234

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +     L  L   I +       L   + Y + R   G  + +   +   +A++   
Sbjct: 235 FAYLMQSLPLERLGIGIAAQVSAEAVLGWTLDYVKERTAFGKRVGEFQGLGFTLAELQTA 294

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  + A   R     +     + +AA A       K W  ++   VI   ++  GG GY+
Sbjct: 295 VEVSRAYIDRCVREHNAGTLTAVDAAKA-------KLWATELQGRVIDAGVQFHGGYGYM 347

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            E  +A+ Y ++    I  G+   M   +   L K 
Sbjct: 348 MEYPVAKAYIDARIQRIYGGTNEIMKEIIHRDLMKA 383


>gi|58581699|ref|YP_200715.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426293|gb|AAW75330.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 439

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 150/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 69  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVDYGGA 119

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 120 GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 176

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 177 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 226

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   +L     V 
Sbjct: 227 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVL 283

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  +  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 284 GVEGEGFRTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 343

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + ++   EAA A++ A        + A  +  +A++  
Sbjct: 344 ADMKCKLDAALLLTLRAAWLKGQGQTFGTEAAVAKLTA-------SEAAMWITHQAVQIH 396

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 397 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 433


>gi|47522692|ref|NP_999062.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Sus scrofa]
 gi|2829676|sp|P79274|ACADL_PIG RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|1695729|dbj|BAA13965.1| long-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 430

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 128/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         L  ++   GL           +                +     
Sbjct: 73  IPHHAEWEKAGEVSRELWEKAGKQGLLGINIAERHGGIGGDLYSAAIVWEEQAYSNCTGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +A   +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++   SD  I++A    E R     +   L +  
Sbjct: 180 DLQGVRTNAKKDGSD-WILNGSKVFITNGWLSDVVIVVAVTNREARSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +KIG ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 239 MKGFVKGRKLHKIGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIAEL 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +VS       E  +Y ++R   G  +     ++  +A++   I    A         +  
Sbjct: 299 AVSASEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFVDSCLQLHETK 358

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  A+ A       KYW  ++  +V  + ++  GG GY+ E  IAR Y ++    I 
Sbjct: 359 RLESAAASMA-------KYWASELQNSVAYDCVQLHGGWGYMWEYPIARAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|329902137|ref|ZP_08273041.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548860|gb|EGF33488.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 596

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/455 (19%), Positives = 178/455 (39%), Gaps = 64/455 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +    +     G         F      +   +    + ++        + P 
Sbjct: 70  QVTTTKGFKEAFKSFGDAGWQGVQHPAEFGGQGLPK--LVATPCIEMVNAANVSFALCPM 127

Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T  ++ ALMT  +      +   + S ++  T             + LTE + G+D+A 
Sbjct: 128 LTDGAIEALMTAGSDEQKATYLTNLISGKWTGT-------------MNLTEPQAGSDLAM 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE------GRVGCFLVPRLL 262
           + S+     DG + + G K +++    D       ++LA+          +  F+VP+ L
Sbjct: 175 VRSRAVPQDDGSFKVFGTKIYITYGEHDMAENIIHLVLARTPSAPEGIKGISLFVVPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            +     G+ N +    +++K+G +++ T  L+F +     G L+G+ N     +  M  
Sbjct: 235 VNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFVMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDI 366
                  +  +     +  +A+ YA+ R  S           +I QP ++R +  +   I
Sbjct: 295 AARFAVGLQGIGVADRAYQKAVRYAKDRVQSRDLAGSAGPVAIIHQPDVRRMLMTMRSQI 354

Query: 367 AAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIG 420
            A+ ALS+  A + D A   ++EA       +   M PI K W  +++  V +  ++  G
Sbjct: 355 EASRALSYVTAAAHDAALYHTDEATRKANNLFYEFMVPIVKGWSTELSIDVASTGVQIHG 414

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G+IEE   A++YR++   +I  G+      D++                  +D G++ 
Sbjct: 415 GMGFIEETGAAQYYRDARILTIYEGTTAIQANDLIG-------------RKTARDGGANA 461

Query: 481 KKVITILRDSIS-LCKEDKGLARFLTEKIALASSA 514
           K +I  +R S   L   D      +  ++  A+ A
Sbjct: 462 KAIIAQVRHSAGELAGSDSADLAAIRVRLDDAAQA 496


>gi|226362475|ref|YP_002780253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240960|dbj|BAH51308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 379

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 121/369 (32%), Gaps = 26/369 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+ E    +   +       GL    +   +    +     ++               +
Sbjct: 31  VDEHEKSETYPEGVFATLGEAGLLSLPYPEEWGGGGQPYEVYLQVLEEIAARWASVAVAV 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S    +   +    T    + W P +                +      L+E + G+D A
Sbjct: 91  SVHSLACHPLMAFGTDEQKQQWLPDMLGG-------------NTIGAYSLSEPQAGSDAA 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+  +      G        W     ++D + + A+     G   +   L      GL +
Sbjct: 138 ALACKAAATDGGYVVNGAKAWITHGGIADFYNLFART--GEGSKGISCFLVPKDTEGLTF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMR 329
            + + K+G  +  T    + + F      L      ++     +    L  A ++V   +
Sbjct: 196 GKPEEKMGLHAVPTTSAHYDDAFVPTERRLGAEGQGLQIAFSALDSGRLGIAAVAVGLAQ 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L EA+ YA+ R   G  +ID   +   +AD+A  + +A A     A   D     S  
Sbjct: 256 AALDEAVAYAQERTTFGKKIIDHQGLGFLLADMAAAVDSARATYLDAARRRDAGLPYSR- 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K      A  V  +A++ +GG GY  +  + R+ RE+    I  G+   
Sbjct: 315 ------NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVERYMREAKITQIFEGTNQI 368

Query: 450 MVLDVLNLL 458
             L +   L
Sbjct: 369 QRLVISRSL 377


>gi|56205490|emb|CAI22389.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Homo
           sapiens]
 gi|119626804|gb|EAX06399.1| acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, isoform
           CRA_a [Homo sapiens]
          Length = 454

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 21/293 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G+D+A I ++ +K  D         
Sbjct: 164 MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 223

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 224 WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 283

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     K+ +          A  +V   + +L EA  YA  R 
Sbjct: 284 VFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERK 340

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 341 TFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKAF 393

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 394 AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 446


>gi|88704950|ref|ZP_01102662.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88700645|gb|EAQ97752.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 381

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 127/373 (34%), Gaps = 32/373 (8%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V FH  W         L R++   G         +        +          +     
Sbjct: 27  VPFHGQWEKDGQVDRELWRKAGAQGYLVPQAPEVYGGAGADFRYNAIIDEEVSRSGCTGL 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    + +                  +  +   + +TE   G+
Sbjct: 87  GWGVHSDIVVPYLMRYGSDAQKEKYIAACV-------------RGDMVTAIAMTEPGTGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+  I +      D  Y ++G K F+++   +D  +++ + +   G      +L +    
Sbjct: 134 DLQGIRTHAVADGDE-YVINGSKTFITNGQHADLVVVVCKTDPEAGAAGTSLILVEADRA 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   K+G ++  T EL FS+       LLG+       +        L   IM++
Sbjct: 193 GFEKGRNLEKVGMKAQDTSELFFSDVRVPRENLLGEEGKGFVYLMQELPQERLSIGIMAM 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +   V L + I Y + R   G  +      +  +A++  ++ +A     R        + 
Sbjct: 253 AASEVCLRQTIDYVKERQAFGKPIAALQNTQFKLAELDTELTSAQVFMDRCLELLVAGQL 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A+++         ++   ++ E ++  GG GY+ E  +AR + +S    I  G
Sbjct: 313 DTVTASKAKLL-------GSELQCRIVDECVQLHGGYGYMWEYPVARAFADSRVQRIYGG 365

Query: 446 SGNAMVLDVLNLL 458
           +   M L +   L
Sbjct: 366 TSEVMKLIIGRSL 378


>gi|325853068|ref|ZP_08171217.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola CRIS 18C-A]
 gi|325484442|gb|EGC87363.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola CRIS 18C-A]
          Length = 577

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 85/474 (17%), Positives = 170/474 (35%), Gaps = 52/474 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            V +    + A   +   P L          +++ +       +  +   GL      R 
Sbjct: 60  DVAANIIAQNAEAVDQEGPHLID--------NRMHYASKTLENIEATRQAGLWGVSMPRR 111

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +  +          + +   A     ++ S        +         + + P+I + E 
Sbjct: 112 YGGLNLPNVVFSMLSEVIAAADAGFQNIWSLQSC-IDTLYEFGNEEQRQKYIPRICAGE- 169

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDA 242
                         + + LTE   G+D+  +  +      +  + L+G K F+++  SD 
Sbjct: 170 -------------TMSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDI 216

Query: 243 FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    L G+
Sbjct: 217 HLVLARSEEGTRDGRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCGN 276

Query: 302 LNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             +     V  +     L  A  SV   + +  E + YA+ R   G  +I  P +   ++
Sbjct: 277 TRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLS 336

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA-----------------YARIMAPITKYW 403
            +   + A  +L ++ A   D  K+  + A                   A    P+ K  
Sbjct: 337 RMKAKLDAGRSLLYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGI 396

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  +  GT 
Sbjct: 397 NSEYANQTAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTY 456

Query: 464 LF---EQLFSTLEQDLGSSGKKVITIL----RDSISL--CKEDKGLARFLTEKI 508
           L    E L   L  D   + +  +  L    ++++      E++ +  FL  ++
Sbjct: 457 LSIMKEMLEDELACDCMKALRDRVARLVRLYQEAVEKVNAGENQDVHDFLARRL 510


>gi|318059027|ref|ZP_07977750.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318076807|ref|ZP_07984139.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 390

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ +  P    +LR++   GL               +   +          
Sbjct: 32  HLAPHALEWDREKHFPV--DVLRKAAGLGLGGVYVREESGGSGLTRTDGVLVFEALATGC 89

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S       M+             P + +                     LTE 
Sbjct: 90  PCVAAYLSIHNMVGWMIDTYGDEAQRARHLPGLCAM-------------DDLASYCLTEP 136

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++  +  D  + L+G K F+S   +   ++++A+  G  G   +   L D
Sbjct: 137 GAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMART-GGAGPDGITAFLVD 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL +   ++K+G  +  T ++           +LG          +      L  A
Sbjct: 195 KDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRLGIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G R +L  ++ +   R   G  LI+   ++  +AD+A ++AAA AL  + A++ D
Sbjct: 255 ACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLHQAADALD 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +      A  +  + K +       +   A++  GG GY+ E  I +  R+   + 
Sbjct: 315 RKDPQ------APQLIAMAKRFATDSGFHIADRALQLHGGYGYLHEYGIEKIVRDLRVHQ 368

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL GS   M + V   L
Sbjct: 369 ILEGSNEIMRVIVARGL 385


>gi|237817454|ref|ZP_04596446.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|237788267|gb|EEP62483.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
          Length = 381

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 120/349 (34%), Gaps = 25/349 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   +      + + +   +  + 
Sbjct: 40  DIIEEMRAMGLFGLSIPEEYGGLGLTMEEEVLVGFELGYTSPAFRSVIGTNNGIGSQGII 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W P++ S               +     LTE   G+D  A+ +  ++  D
Sbjct: 100 ADGTDDQKKYWLPRLASG-------------GIIGSFALTEPDVGSDAGAVRTTAERDGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  ++P++  F ++A+  G  G   +   L +    GL      +K+G R 
Sbjct: 147 SYIINGTKRFITNAPVAGVFTLMART-GGSGPSGISAFLVERDLPGLTVGTPDHKMGQRG 205

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++   N        + G           +     L  + +        + E++ +A
Sbjct: 206 TQTCDVYLENVRVPATSIIGGVEGRGFKTAMKVLNRGRLHISSVCAGTAERPIEESVGFA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  +AD++ +  A   +    A +FDE+             A  
Sbjct: 266 GSRVQFGKRIAEHQMIQAMLADMSTEAYAGRCMVLDAARAFDESNVDI------IRKAAS 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            K +C +M   V   A++  GGSGY++   +   YR+     +  G+  
Sbjct: 320 CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVEHFYRDVRLFRLYEGTSQ 368


>gi|320010671|gb|ADW05521.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 388

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 147/406 (36%), Gaps = 35/406 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 4   DHRLTAEHEELRRTVEEF-----AHDVIAPKIGDFYERHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  V    T    + W PK+ +
Sbjct: 59  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPVFRFGTEEQKRQWLPKLCA 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D     +        G + ++G K F+++  
Sbjct: 119 GE-------------ALGAFGLTEPDGGSDAGGTRTTAVLDEAAGEWVINGSKCFITNSG 165

Query: 240 SDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G   +  ++      G       +K+G  ++ T EL FS+  
Sbjct: 166 TDITELVTVTAVTGRKENGAPRISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFSDVR 225

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G  + ++IL    +  + +S    +  + E++ YA+ RH  G  +   
Sbjct: 226 VPAANLLGEEGRGYAQFLRILDEGRIAISALSTGLAQGCVDESLKYAKERHAFGKPIGAN 285

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+      A       A+     +   +EAA       I K +   +A    
Sbjct: 286 QAIQFKIADMETRAHMARIGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAVDNA 338

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 339 RDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|15842262|ref|NP_337299.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|13882554|gb|AAK47113.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|323718717|gb|EGB27879.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CDC1551A]
          Length = 386

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 134/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E    +D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTASDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIS 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|42522736|ref|NP_968116.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
 gi|39573932|emb|CAE79109.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100]
          Length = 428

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 130/388 (33%), Gaps = 32/388 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E       L R+    GL        F                +  A    
Sbjct: 60  PQAHEHDRSEKFNL--ELFRKVGELGLLGITVPEQFGGAGMDATAATIVHEEFSAADPGF 117

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++ S+   + +A+  +        PK+ S E+                + ++E   
Sbjct: 118 CLAYLAHSMLCVNNIAVNGSDEQRHRILPKLCSGEW-------------VGSMAMSEPAI 164

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM------SDAFIMLAQVEGRVGCFLVPRL 261
           GTD+  + +   K  D         W  +  +       D  ++ A+   + G  L+   
Sbjct: 165 GTDVLGMQTTAVKKGDEYIINGRKMWITNGTIDENNTPCDLVLVYARTGEKHGRALISTF 224

Query: 262 LEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--Y 317
           L +    G     ++K+K+G R + T EL F +        +       +  M+ L    
Sbjct: 225 LVEKDHKGFAVGQKIKDKLGMRGSNTAELVFQDCHVPASALIGHEGDSMLHMMRNLEIER 284

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A MS+   R S+     YA  R   G  L     M+R IAD   +  AA A  +  A
Sbjct: 285 LTLAAMSLGIARRSIEIMNRYATEREAFGKSLNHFGQMQRYIADSYAEYKAARAYVYETA 344

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  K  +   +    +          MA  V   A++ +GG GY+ E  + R +R++
Sbjct: 345 RRMDLNKEGNRLDSDGVKLVA------TTMAKNVADRAIQVLGGYGYVGEYVVERLWRDA 398

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLF 465
               I  G+  A   ++   L K     
Sbjct: 399 KLLEIGGGTLEAHQKNITRDLAKNPEAL 426


>gi|288959447|ref|YP_003449788.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288911755|dbj|BAI73244.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 611

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/526 (19%), Positives = 191/526 (36%), Gaps = 57/526 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK---V 97
           +L  L            E     ++     E A++A      L+      G R D     
Sbjct: 18  VLDHLAGMADVAALPGFEDASPDMVDSILGEAAKIAENILAPLNRVGDVQGARLDADGIA 77

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                W    R  +  G +   +D +   +            ++  A +        +  
Sbjct: 78  RTAEGWGEAWRTLVEGGWNGLPFDPARGGMGLPNLLNSAVQEMWHSANMAFALCPMLTQG 137

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + + V L  +  +   + PK+ S  +  T             + +TE + G+D+AA  S+
Sbjct: 138 AVNAVQLYGSDALKDLYLPKMISGAWTGT-------------MNITEPQAGSDLAATRSR 184

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
                D      G K F++    D       ++LA++         +  F+VP+ L +  
Sbjct: 185 AVPNGDHHLVT-GQKIFITYGDHDLTENIIHLVLARLPDAPSGVKGISLFVVPKFLVNAD 243

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    L++K+G   + T  L F +     GFL+G+ N     +  M     L
Sbjct: 244 GGLGARNQVKCVSLEHKLGIHGSPTAVLSFGDEGGATGFLVGEPNRGLEYMFTMMNHARL 303

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS-------GGI--LIDQPVMKRAIADIALDIAAA 369
             A+  +S    +  +A+ YAR R          G    +++ P ++R +  +   I A 
Sbjct: 304 AVAMQGLSIAERAYQQALAYARDRVQGKPLGWTEGRPKGIVNHPDVRRLLMGMKARIEAM 363

Query: 370 TALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             L +       +A+   +  +R   A    ++ PI K WC +   A+ ++ ++  GG G
Sbjct: 364 RGLLYTAAAAVDVAHHHADEDARGRAALLVDLLTPIAKGWCTETGQALASDGVQVHGGMG 423

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS-SG 480
           +IEE   A+H R++   +I  G+      D++N  +L  G      L   +    G  SG
Sbjct: 424 FIEETGAAQHLRDARITTIYEGTTAIQANDLINRKILRDGGAAANGLLDEIAALGGELSG 483

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIA--LASSAAALYRAGMND 524
                 L +++ +   +   A     +    + S+A    R     
Sbjct: 484 HAASGPLGEALCVTGAELVSAAHEARQAVAWVLSAAKQDARLAAAA 529


>gi|325921333|ref|ZP_08183191.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325548191|gb|EGD19187.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 416

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 148/397 (37%), Gaps = 40/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 46  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--DNIRLLGENGLMGIEVPAEYGGA 96

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I        
Sbjct: 97  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAI-------- 148

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                 + +      LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 149 -----AEGAQIGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 203

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 204 FAVTEPDKGSRGITAFMVDADRAGFHRGKTEPKLGIRASATCEIEFADYIAQPDEVLGVE 263

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 264 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 321

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 322 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 374

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G GY +E  + R++R++    I  G+     L +   
Sbjct: 375 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIARA 411


>gi|40788122|emb|CAD60270.1| putative feruloyl-CoA dehydrogenase [Pseudomonas fluorescens]
          Length = 584

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 102/523 (19%), Positives = 188/523 (35%), Gaps = 53/523 (10%)

Query: 42  LLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKV 97
           +L   +    +       E L   +     ++ AR +      L+A     G RW   +V
Sbjct: 14  VLEHWLEAPEAWRRSPAFEALDLPLALQVLEQAARFSQGVLAPLNASGDRQGCRWADGQV 73

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                +    R  +  G        +       Q        +   +          +  
Sbjct: 74  STPEGFADAYRAYVEGGWPALACAEALGGQGLPQLLDAALQEMLYASNHAWAMYTGIAHG 133

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +     P + + + P I S              +    + LTE R  +D+  +  +
Sbjct: 134 AYLCLKTHGAPWLQERYLPAIISG-------------ASLPTMCLTEPRLASDVGLLRCR 180

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDGS 266
            +  +DG Y LSG K F+S    D       ++LA++         +  FLVP+ LE G 
Sbjct: 181 AEPQADGSYRLSGSKLFISGGEHDLTDNILHLVLARLPDAPEGSRGISLFLVPKRLEQGQ 240

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            NG+    +++K+G + +AT  L F    G+L+G+ N     +  M     L   +  + 
Sbjct: 241 DNGVRCNGIEHKMGIKGSATCSLVFDAAQGWLVGEANRGLAAMFVMMNSARLHVGLQGLG 300

Query: 327 GMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALS 373
            +  +   A+ YA  R                   +   P M+R + ++        A+ 
Sbjct: 301 HVEAAWQNALAYAGERQQMRAPLRPAGGAAQAADPIRYHPAMRRVLLELRATSEGLRAIG 360

Query: 374 FRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A+  D+A+      +R +    A+++ PI K +  +      + A++  GG GY+ E
Sbjct: 361 YWAAHLLDQAEHHPEPLARRQADQLAQLLTPIIKAFFTEQGFRQASNALQVFGGYGYVAE 420

Query: 428 RSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL--EQDLGSSGKKV 483
            +I +  R+S    I  GS       L +  +L  G   F  L   L  E + G++    
Sbjct: 421 FAIEQTLRDSRIAMIYEGSNEIQANDLLLRKVLGDGGQGFALLLEQLRDEAEQGAAVAGC 480

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
                    L +  +GL     ++ AL   A   YRA  + +A
Sbjct: 481 AGFAGPLADLAEALQGLVGE-VQQWAL-EDAEYPYRAAGDFLA 521


>gi|15790481|ref|NP_280305.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169236217|ref|YP_001689417.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|10580979|gb|AAG19785.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|167727283|emb|CAP14069.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 374

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 127/375 (33%), Gaps = 31/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    +       G+       S+  +                  L  
Sbjct: 24  PVAAEADRTQSFPE--EVWDDLGELGVTAMTTPASYGGLDVDSLTYSVVNEQLAYGALSV 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S    + S +A        + W P+             M          L+E   G
Sbjct: 82  ATALSVHCLATSCIAEFGDDDQQERWLPE-------------MADGRPVGAFALSEPDAG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ A +++  ++  D        +W  +   S   I+ A+++G      + + L     +
Sbjct: 129 SNPAQMSTTARRDGDEFVLNGKKQWITNGKRSGVVIVFAKIDGDDDK--ITQFLVPKDAD 186

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           GL     ++K+G R++ T  L F +        L  +   +     L  L    + ++  
Sbjct: 187 GLTVGPKEDKLGLRASDTTSLLFDDCRIPASNQLTEAGRGLSAA--LHILTGGRIGIASQ 244

Query: 329 RVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V L++A   A       R      + +   ++  +AD+   + AA  LS   A   D  
Sbjct: 245 AVGLSQAALDAALAYADDREQFDQPISEIQTIRHKLADMETQVQAARLLSRDAARMADAG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +     AA A       KY+  + A  V  EA++  GG GY ++  + R YR+S   +I 
Sbjct: 305 EDHQTAAAKA-------KYFASEAAVDVTNEAVQIHGGYGYTKDFDVERFYRDSKITTIY 357

Query: 444 LGSGNAMVLDVLNLL 458
            G+       +   L
Sbjct: 358 EGTSEIQKEVIARGL 372


>gi|326386146|ref|ZP_08207770.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209371|gb|EGD60164.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 573

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/499 (18%), Positives = 172/499 (34%), Gaps = 58/499 (11%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHPAWHA 105
             F +     +E + E +    A E A +              G +WD   V     +  
Sbjct: 27  ERFAAATPDLVEAIAEGIGQLAAGEWAPLNRIG-------DTEGAKWDDGVVTLPAGYAE 79

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
             R     G +       F                   A +    L   +V +   +   
Sbjct: 80  AYRAFFEQGWNSISGSTDFGGQGLPFTLATCILETLGAANMGFTLLPMLTVGAIEAIDHH 139

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            +      +  K+ S E+  T             + LTE + G+D+ A+ S    I++G 
Sbjct: 140 GSDAQKATYLAKLISGEWSGT-------------MNLTEPQAGSDVGALRSTAAPITEGE 186

Query: 225 ---IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLED----------G 265
               Y + G K F++    D       ++LA+  G   G   +   +            G
Sbjct: 187 HAGKYRVKGTKIFITWGEHDLAENIVHLVLARTPGAPAGTRGISLFIVPKYHVLADGSLG 246

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           + N +    +++K+G  S+ T  + F +     G ++G        +  M     ++   
Sbjct: 247 ARNDVRCVSIEHKLGIHSSPTCVMSFGDHDECIGEMVGAEFGGLKAMFTMMNSARVNVGN 306

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALS 373
             V     +L +A+ YAR R  S            +I+ P ++R I  +      A  L 
Sbjct: 307 QGVQISEAALQKALSYARDRIQSPRASSGDKTPVAIIEHPDVRRTIMRMRALTEGARGLL 366

Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  A   D       +A   A ++ P+ K W       V    ++  GG G+IEE   A+
Sbjct: 367 YYTAGQIDRGTLGDTDAQKRAEVLVPLLKAWGTDTGCEVATLGVQVHGGMGFIEETGAAQ 426

Query: 433 HYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            YR++    I  G+      D +   L     ++ + L   +  D   S  ++ ++ RD+
Sbjct: 427 FYRDARIAPIYEGTNGIQAADFVTRKLGYDNGDVVKALLEDIVADCAES-PELASLARDA 485

Query: 491 ISLCKEDKGLARFLTEKIA 509
           +++     G    L +K+A
Sbjct: 486 LAIAAWMAGGDASLDDKLA 504


>gi|167537125|ref|XP_001750232.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771222|gb|EDQ84891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 395

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 130/375 (34%), Gaps = 34/375 (9%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           D V +H AW        A+  ++  +GL        +                   A   
Sbjct: 40  DVVPYHEAWEKEGQVPRAIWEKAGENGLLGIPIPEEYGGPGLDVYGAAIMWEEQAYAGCY 99

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S      V    T      + P                  +    +G+TE   
Sbjct: 100 GPGYAIHSDIVLPYVLHYGTEEQKHKYLPG-------------ACAGTQIAAIGMTEPGA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFLVPRLLED 264
           G+D+  I++   K  D  + ++G K F+S+  M D  I++A+ +   +     +   L D
Sbjct: 147 GSDLQGISTTAVKDGDH-WVINGSKVFISNGQMCDYVIVVAKTDLEAKRAAHGLSLFLVD 205

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G       +K+G ++  T EL F +        LG++N     +        L   
Sbjct: 206 AGTAGFTKGANLDKMGLKAQDTSELFFDDCRVPESAILGEVNKGFYYLMSELPQERLLLG 265

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +M+ +           Y   R   GG L +   ++  +A++   IA A A + +      
Sbjct: 266 VMATAHAEAMYEWTRAYINDRKAFGGTLANLQTVRHTMAELKTSIAVARAFTDQCIQLHA 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +   E       MA ++KYWC ++   V    ++  GG GY+ E  I+R + ++    
Sbjct: 326 EGRLTQE-------MASMSKYWCTELEGKVADVCVQLHGGWGYMSEYKISRAFTDARVQR 378

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M   +  
Sbjct: 379 IYGGANEIMKELISR 393


>gi|78047161|ref|YP_363336.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035591|emb|CAJ23258.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 382

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVEYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 230 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 288 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 341 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|145221050|ref|YP_001131728.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315441978|ref|YP_004074857.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145213536|gb|ABP42940.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315260281|gb|ADT97022.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 385

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 131/366 (35%), Gaps = 29/366 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++     G++      S+          +   +      +     M      
Sbjct: 37  YPEAWIDQMK---QIGIYGLAVPESYGGTPVSTRCYVLVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + + E   T             + LTE  GG+D+ A+ +  
Sbjct: 94  AKLLTLFGTEEQKQRYLPAMATGEIRAT-------------MALTEPGGGSDLQAMGTVA 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLK 276
           ++  D +       W  ++  S    +L + +         +  +L D    GL   R  
Sbjct: 141 RRDGDDLVLSGTKTWISNARRSGLIALLCKTDPDATPKHSGISVVLVDNPTPGLTVSRDL 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVSL 332
            K+G +   + EL F          L      G  + MK L    +  A  ++     +L
Sbjct: 201 PKLGYKGVESCELAFDACRVPASAILGGTPGKGFSQMMKGLETGRIQVASRALGVASAAL 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A+ +D  +    EA  
Sbjct: 261 EDALAYAQDRESFGRPIWKHQAVGHYLADMATKLTAARQLTLYAADRYDSGERADMEAGM 320

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+      
Sbjct: 321 A-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRN 373

Query: 453 DVLNLL 458
            +   L
Sbjct: 374 VIAGQL 379


>gi|320450263|ref|YP_004202359.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150432|gb|ADW21810.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 380

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 137/361 (37%), Gaps = 34/361 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           L+RR    G                      A    L        ++S   +      L 
Sbjct: 37  LVRRMGELGFLGVFVPEELGGAGLDF-WAYIALLEELGGYASLRSILSVQQSLVLTPLLA 95

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++              K  +    GLTE   G+D  ++ ++  +  D 
Sbjct: 96  YGTEEQKRRYVPRL-------------AKGEILGAYGLTEPEAGSDAGSLRTRAYRDGDH 142

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L G K F+S   ++  F++ A+ +   G   +   L +   +G+    LK K+G R+
Sbjct: 143 -YVLEGQKTFISHANVAQVFLIFAKTDPDKGSRGITAFLVERE-DGVRTTPLKGKLGLRA 200

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIH 337
             T  +         +    V     +  KI +       +  A  +V  M+ +L  ++ 
Sbjct: 201 ADTGMVFLEGVR---IPKDRVLGEEGQGFKIALSTLDTGRVSLAAGAVGLMQRALDLSLR 257

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ RH  G  +    +++  +A + LD+ A+  L+++      + +  + EA+ A    
Sbjct: 258 YAKERHQFGRPIASFQLVQAHLAQMKLDLEASRLLTYQAVAKKLKGERYTLEASMA---- 313

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  + A  V   A++  GG G+ EE  +AR YR++   ++  G+     L +   
Sbjct: 314 ---KLFASEAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEVQTLVIGAH 370

Query: 458 L 458
           L
Sbjct: 371 L 371


>gi|24215339|ref|NP_712820.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24196446|gb|AAN49838.1|AE011431_2 acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 161/431 (37%), Gaps = 47/431 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-P 154
           KV F       + +  + G+      R    +       ++   L L ++ +    ++  
Sbjct: 95  KVTFPETMIKGIEQVKNSGILPYSIGRKHGGLGVPA--TVQCMMLELFSRADGSFAIALG 152

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +  A  +    +  +  ++ PK+ + E                 + LTE   G+D+  +
Sbjct: 153 CLNLAETIERFGSKEMIDEYVPKMANGEIFG-------------AMALTEPNYGSDLPNL 199

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
            ++  K  +GI+ L+G K F++            + LA+      G   +   L   S  
Sbjct: 200 QTKAIKDENGIWKLTGTKRFITHGCGFANIPAVILTLARTGTPTSGARGLSFFLVKSS-- 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSG 327
            +    ++ K+G   + T E+ + NT G L+G+           M     L  A  ++  
Sbjct: 258 DVFIAGIEKKMGLHCSPTCEVVYENTPGILIGEEGYGLVRYSMAMMNGARLSIAAQAMGI 317

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +  EA  YA  R   G  + + P + + ++ +  +IA   A+    + S D    +S
Sbjct: 318 ATAAYMEAKKYASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKS 377

Query: 388 E--------------------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           E                        A +  P++KY+  ++A  +  +A++  GG+G+  +
Sbjct: 378 ERMRENGIEEREIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYD 437

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVIT 485
             ++R YR+    +I  G+    V+  +  +  G +    L    E++      G  ++ 
Sbjct: 438 YDVSRIYRDVRITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKIGGGSTLLN 497

Query: 486 ILRDSISLCKE 496
             +DS+    E
Sbjct: 498 ENKDSLEKIVE 508


>gi|118468177|ref|YP_884524.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169464|gb|ABK70360.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 379

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 135/399 (33%), Gaps = 29/399 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + S  A++L  +      ++    P  +  ++ E +P    +  +    GL       
Sbjct: 5   RLLPSEEARDLIALTREVADKV--LDPIVDEHERNETYPEG--VFAQLGAAGLLSLPQPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S+  +    T    + W P + S E
Sbjct: 61  QWGGGGQPYEVYLQVLEEIAARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGE 120

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              L+E + G+D AA+    ++  DG        W      +D 
Sbjct: 121 Q-------------IGAYSLSEPQAGSDAAALRCAARRDGDGFVLNGSKAWITHGGRADF 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + + A+     G   V   L  G   GL + + + K+G  +  T    + N       L+
Sbjct: 168 YTLFART--GEGSKGVSCFLVPGDLPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRLI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++V   + +L EA+ YA  R   G  +ID   +   +
Sbjct: 226 GTEGQGLSIAFSALDSGRLGIAAVAVGIAQAALDEAVRYAHERTTFGRKIIDHQGLGFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + +A A     A   D     S +       A + K      A  V  +A++ +
Sbjct: 286 ADMAAAVVSARATYLDAARRRDAGLPYSSQ-------ASVAKLVATDAAMKVTTDAVQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  +  + R+ RE+    I  G+     L +   L
Sbjct: 339 GGVGYTRDFRVERYMREAKITQIFEGTNQIQRLVISRGL 377


>gi|111024069|ref|YP_707041.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110823599|gb|ABG98883.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 389

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/416 (21%), Positives = 143/416 (34%), Gaps = 48/416 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           S +  EL             ELAR   A   TP    +   G         P    +   
Sbjct: 13  SWMDDEL---------GAVAELARNFFAKEVTPHQRRFAAQG--------FPD-KEIYGT 54

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
               GL        F       AH        +MA   +  L   S      +    +  
Sbjct: 55  LGKLGLSGMSIPTEFGGGGGTFAHDAVLFHEQVMAGDHSLQLGVHSGIVPHYLNAYGSLE 114

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               W PK+ S E+                + +TE   G+D+  IT+Q  +   G Y ++
Sbjct: 115 QKSRWLPKLTSGEW-------------VGAIAMTEPSAGSDLQNITTQAVRDG-GDYVIT 160

Query: 230 GHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRSNAT 286
           G K F+S+    D  I+ A+ +  +G   V  ++   +    G    ++ +K+G +   T
Sbjct: 161 GAKTFISNGRNCDLVIIAAKTDATLGAKGVSLVVAEVNDDTPGFSRGQIFDKLGQKGQDT 220

Query: 287 VELEFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            EL F      +          G V+ M+ L    L   + +V+ +  ++A  I Y + R
Sbjct: 221 TELFFDGLRVSVDNLLGEREGAGFVQLMQQLPQERLICGVAAVAAIERAVALTIEYTKSR 280

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            + G  L D    +  +A+ A     +           D+   +          A + KY
Sbjct: 281 TMFGKTLFDLQNTRFELAECAALARVSRTF-------IDDCIDKHLRGELDVTTAAMAKY 333

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W      AVI   ++  GG GYI E  IA+ Y ++    I  GS   M   +   L
Sbjct: 334 WLTDQQCAVIDRCLQLFGGYGYILEYPIAQMYADARIQRIYAGSNEVMKELISRAL 389


>gi|317051582|ref|YP_004112698.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
 gi|316946666|gb|ADU66142.1| acyl-CoA dehydrogenase domain-containing protein
           [Desulfurispirillum indicum S5]
          Length = 592

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 81/459 (17%), Positives = 158/459 (34%), Gaps = 37/459 (8%)

Query: 94  WDKVE--FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            D++E         L+ ++   GL  +        +   +A  +  A     A   +   
Sbjct: 49  IDEIEQQNFDLVVELMGKAGELGLLMTDASEEEGGLELDKATSMLVAEKIAPAGSFSVAF 108

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +    T    + +  +I + E+                  LTE   G+D 
Sbjct: 109 AAHTGIGTLPLIYYGTAEQKERYLSRIITGEWM-------------SAYCLTEPGSGSDA 155

Query: 212 AAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               +      DG  Y L+G K F+++   +  F + A+++           L +    G
Sbjct: 156 LGAQATAVLSEDGKYYILNGTKQFITNGGFAQLFTVFAKIDKEH----FTAFLVEKDFEG 211

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           L     + K+G + ++T ++  +N       LLG++        ++  +           
Sbjct: 212 LEIGAEEKKLGIKGSSTTQVILNNCRIPVENLLGEIGKGHKIAFNVLNVGRFKLGAAVSG 271

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +++L E I YA  R   G  +     +   IA++  DI AA +L +RLA   D   + 
Sbjct: 272 AAKMALQEGIKYANERKQFGRPISSFGAISEKIANMTADIFAAESLIYRLAGLLDNKLAT 331

Query: 387 SEEA------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            E+                     I K +C ++    + E ++  GG G++ E    R Y
Sbjct: 332 IEKGIDNYYEEYQKGIEEYAPECGIAKVFCSEVLARTVDEVLQIHGGYGFVSEYPAERFY 391

Query: 435 RESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           R+   N I  G+     L V  + L K       L S   +            L ++   
Sbjct: 392 RDERINRIFEGTNEINRLLVPGMILRKAMKGELPLQSEAMKAFEQLMTPSFEELDENDPF 451

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
            +E + +       + L+ +A   Y   + D  ++ L  
Sbjct: 452 AREKQLVKNLKNLFLILSGAAVQKYMDKLQDEQEILLAA 490


>gi|85858915|ref|YP_461117.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85722006|gb|ABC76949.1| acyl-CoA dehydrogenase, long-chain specific [Syntrophus
           aciditrophicus SB]
          Length = 389

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 123/372 (33%), Gaps = 28/372 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E W++    P W    ++    G        ++        +++                
Sbjct: 39  EEWEEAGIVPRW--AWKKMGEQGFLGMSVPEAYGGPAVDFLYEVVVIEELARTNFTGLAA 96

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +      +    +    K + P   S               +   +G+TE   G+D+
Sbjct: 97  RLHNTVVLPYLIEYGSEEQKKRYLPGCVSG-------------DIITAIGMTEPNTGSDL 143

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNG 269
           AAI +      D    L+G K F+S+ ++   I+L   +         +   L +    G
Sbjct: 144 AAIRTTAVADRDE-IVLNGQKTFISNGINCDLIVLVARDPAVEDPHKAIDLYLVEAGTPG 202

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVS 326
               R   KIG  S  T EL F+     +   L         + +M     L  AI +  
Sbjct: 203 FEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGTGFRKMMEMLQQERLVVAIGAQV 262

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L   I Y R R V G  +      +   A++A +I        ++     E +  
Sbjct: 263 MAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMATEIEIGRTFLDKMIVEHMEGRDL 322

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + E + A       KYW   MA  V    ++  GG GY EE  IAR +R+     I  GS
Sbjct: 323 TREMSMA-------KYWITDMAGRVADRCLQLHGGYGYCEEYPIARAWRDIRIMRIYAGS 375

Query: 447 GNAMVLDVLNLL 458
              M + +   L
Sbjct: 376 NEIMKVIIARTL 387


>gi|269925483|ref|YP_003322106.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789143|gb|ACZ41284.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 406

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 127/357 (35%), Gaps = 32/357 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +++R    GL  +     +                   A+     +MS  V   S+  
Sbjct: 39  KDIVKRMGELGLLGAPIPEEYGGSGMDYHSLAIICEELERAETAFRVVMSVHVALNSLTL 98

Query: 164 L-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           L        + +               P  +        LTE   G+D A I +  ++  
Sbjct: 99  LQWGNEDQKQRYLI-------------PQARGEKLATFALTEPGHGSDAANIETTARREG 145

Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y L+G K ++S +  +D F++ A ++   G   +   + +    GL    +  K+G 
Sbjct: 146 D-YYVLNGQKTWISLADKADHFLLFATLDRSKGYKGITAFILERGFEGLSTSTIHGKLGV 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           R+  T ++   N    +    N      E  KI +       L  A  +V   R  L  +
Sbjct: 205 RAGNTGQIFLDNVRVPI---ENRLGEEGEGFKIAMSAIDQGRLTVAAGAVGLARACLEAS 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y   R   G  +    ++++ IA++ L I  A  L  R A   +     + E      
Sbjct: 262 LKYCHDREAFGQEIGKFQLVQQMIANMQLGIDTAKLLVHRAAWLKNHGIRSTRE------ 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              + K++ C +A     +A+E  G +GY  E  + R++R +    I  G+     L
Sbjct: 316 -TSMAKWYACNVALKAAEDAIEIHGANGYSNEFPVERYWRNARGAVIYEGTREIHTL 371


>gi|209148755|gb|ACI32953.1| Long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Salmo salar]
          Length = 411

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 126/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         L +++   GL   +       +              + +     
Sbjct: 54  VPYHKEWEKAGMVSRELWQKAGEQGLLGILTPEEHGGIGGDLLSAAVMWEEQMYSNCSGP 113

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      ++   +      + P+             M   +    + +TE   G+
Sbjct: 114 GFALHSEICMPYISNYGSKEQIDRFIPQ-------------MAAGTCIGAIAMTEPGAGS 160

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  +K  D  + L+G+K F+++  M+D  I++     E +     +   L +  
Sbjct: 161 DLQGVRTYAKKDGDD-WILNGNKVFITNGCMADMVIVVTVTNREAKTAAHGISLFLVEKG 219

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   KIG  +  T EL F +       LLG  N     + +      L  A M
Sbjct: 220 MPGFQAGKKLEKIGLMAQDTAELFFEDVRLPASALLGQANKGFYYLMNELPQERLLIADM 279

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +++       E  +Y  +R   G  +     ++  +A++  +I    +         D  
Sbjct: 280 AIASSEFMFEETRNYVTQRKAFGKTIAHLQTVQHKLAELKTEICVGRSF-------LDNC 332

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E       A + KYW   +  +V    ++  GG GY+ E  IA+ + +S    I 
Sbjct: 333 LQLHAEKRLDSQTASMAKYWASDLQNSVATRCLQLHGGWGYMWEYPIAKAFVDSRIQPIY 392

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 393 GGTNEIMKELIARSI 407


>gi|182438549|ref|YP_001826268.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178467065|dbj|BAG21585.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 392

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 149/409 (36%), Gaps = 41/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 8   DHRLTAEHEELRRTVEAF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFP 62

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    + W PK+ +
Sbjct: 63  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKRQWLPKLCA 122

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D     +          + ++G K F+++  
Sbjct: 123 GE-------------ALGAFGLTEPDGGSDAGGTRTTAVLDEATDEWVINGSKCFITNSG 169

Query: 240 SDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G   +  ++      G       +K+G  ++ T EL F++  
Sbjct: 170 TDITELVTVTAVTGRKEDGRPRISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFTDVR 229

Query: 296 GFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
                 L     G  + ++I   LD   +++S +   LA     E++ YA  RH  G  +
Sbjct: 230 VPASNLLGEEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAAERHAFGRPI 286

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+ +    A       A+     +   +EAA       I K +   +A 
Sbjct: 287 GTNQAIQFKIADMEMRAHMARVGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAV 339

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 340 DNAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 388


>gi|126632707|emb|CAM56319.1| novel protein (zgc:55656) [Danio rerio]
          Length = 442

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V +H  W         +  ++   GL           +              + +     
Sbjct: 85  VPYHAQWEKAGEVSREVWEKAGKHGLLGVYTPEEHGGIGGDLLSAAIVWEEQMYSNCSGP 144

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      ++   +    + + P++ + +                 + +TE   G+
Sbjct: 145 GFSLHSEIVMPYISHYGSKAQIERYIPQMAAGKC-------------IGAIAMTEPGAGS 191

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++  MSD  I++A  +   +     +   L D  
Sbjct: 192 DLQGVKTFAKKDGTD-WILNGSKVFITNGWMSDVVIVVAVTDREAKTAAHGISLFLVDRG 250

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   K+G ++  T EL F +       LLG +N     + +      L  A+M
Sbjct: 251 TKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQVNKGFYYLMNELPQERLLIAVM 310

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            ++       E+ +Y  +R   G  + D  V++  +A++  +I    A         D  
Sbjct: 311 GLASCEFMFEESRNYVMQRKAFGRTIADLQVVQHKLAELKTEICVGRAF-------IDSC 363

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                E       A + KYW   +   V  + ++  GG GY+ E  IA+ + ++    I 
Sbjct: 364 LQLHSEKKLDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIY 423

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 424 GGTNEIMKELISRNI 438


>gi|332305952|ref|YP_004433803.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173281|gb|AEE22535.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 391

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 131/382 (34%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+ + +P  HAL  +    GL  +   + F  +    +   +       A +  
Sbjct: 27  PIAKEHDQQDKYP--HALAEQMKELGLFGATIGQEFGGLGLPASIYAKIVMKVASAWMAP 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +  +  AS +    T    + + P++ + E             +  G+ LTE   G
Sbjct: 85  SGIFNSHLIQASAIERCGTQAQKERFLPRMATGE-------------LRGGVALTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           TD+ AI +   K  D         W  +S   ++  +L + +             + +  
Sbjct: 132 TDLQAIRTTAVKDGDEYIINGAKTWITNSLNGNSLAVLVKTDLDAVPAHKGTSMFIVETK 191

Query: 267 P------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGPVEDMKILI 316
                   G+   ++  K+G RS  T E+ F N        +                L 
Sbjct: 192 DAQGNFKPGITVSKM-TKLGYRSIDTCEVVFENVRVPAANLVGEKEGSGFKHAIGGLELG 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A       + S   A+ YA+ R   G  +     ++  + ++A  + AA  L  + 
Sbjct: 251 RINVAARGAGIAQGSTELAVRYAQERETFGKAICQHQAIQLKLGEMATQVEAARLLIEQA 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  +D  +    EA  A+        +C         EAM   GG  Y  E  I R+YR+
Sbjct: 311 ATKYDANERCDMEAGMAKYFGSEAGVFC-------ANEAMRIFGGYSYSVEYDIERYYRD 363

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+     + +   L
Sbjct: 364 AMLMCIGEGTNEMQRIIIAKQL 385


>gi|55981885|ref|YP_145182.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|126030329|pdb|2DVL|A Chain A, Crystal Structure Of Project Tt0160 From Thermus
           Thermophilus Hb8
 gi|126030330|pdb|2DVL|B Chain B, Crystal Structure Of Project Tt0160 From Thermus
           Thermophilus Hb8
 gi|55773298|dbj|BAD71739.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 372

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 129/364 (35%), Gaps = 34/364 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           W  L   +   GL        +  V        +    L       A  +   S     M
Sbjct: 37  WPQLKALA-ELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYM 95

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    + +   +   E+                  LTE + G+D  ++ ++ +++
Sbjct: 96  LLRFGSEAQKRRYLVPLARGEW-------------IGAFCLTEPQAGSDAKSLRAEARRV 142

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  S+  +  ++++A+ E       +   L +    GL + R + K+G 
Sbjct: 143 KGGFVLNGVKSWITSAGHAHLYVVMARTE-----KGISAFLVEKGTPGLSFGRPEEKMGL 197

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
            +  T E+     F      L      +     L  LDS  + V+   V +A      A 
Sbjct: 198 HAAHTAEVRLEEVFVPEENLLGEEGRGLAYA--LAGLDSGRVGVAAQAVGIARGAFEIAK 255

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  L +   +   IAD+ + IAAA AL    A   D  +  + EA+ A++ 
Sbjct: 256 AYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLF 315

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A             V  EA++ +GG GY  +  + R+YR++    I  G+     L +  
Sbjct: 316 ASAAA-------VEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIAR 368

Query: 457 LLEK 460
            L +
Sbjct: 369 ELYR 372


>gi|324997990|ref|ZP_08119102.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 385

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 121/353 (34%), Gaps = 28/353 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRV 170
             GL+       +  +    + ++R A            L   +   A  V L   T   
Sbjct: 44  EMGLYGFTIPEQYGGLGLTASEEVRLAFELGWTTPALRSLFGTNNGIAGHVLLEGGTDEQ 103

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W P++ S               V    GLTE   G+D +++ ++  +  D       
Sbjct: 104 KAHWLPQLASG-------------RVTASFGLTEADAGSDPSSLATRAVRDGDSWVINGS 150

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  +SP++D  ++ A+ +    G   +   L      GL       K+G     T ++
Sbjct: 151 KRYITNSPVADVIMVFARTDPDAPGNRGISTFLVPRDTPGLSVGPKDLKMGQFGAWTADV 210

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
              +        +    G           L    + +  + V +A     E + YAR R 
Sbjct: 211 HLDDVRVPFENVVGGEEGIDNGFLTAAKCLAHGRLHIGAVCVGMADRLVHETVEYARTRE 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +++  +AD   D  A   L    A SFD+              A   KY+
Sbjct: 271 QGGKPIARFQLVQGLVADSVTDARAGRGLVLDAARSFDDGTD------MVSGPAA-AKYF 323

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           C +M   V   A++  GG+GY+   ++ R +R++    I  G+     + +  
Sbjct: 324 CSEMVGRVADRAVQVHGGAGYMRGVAVERFFRDARLFRIYEGTSQIQQVIIAR 376


>gi|313813966|gb|EFS51680.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA1]
          Length = 382

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 133/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D               +  G         +                       +
Sbjct: 26  PNAAKVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFILNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|288921878|ref|ZP_06416092.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288346773|gb|EFC81088.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 383

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/392 (19%), Positives = 137/392 (34%), Gaps = 31/392 (7%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A +     P L  +       D+  +  A  A L        H    +R +   V  Q  
Sbjct: 19  AFVTREVVPNLERWDAE-RLIDRETWKRAGAAGLLGLAVPESHGGAGERDYRFRVVLQEE 77

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             R     L +       +  S      +  M T +    W     + E           
Sbjct: 78  IARVGASSLQSSFSTNDDIVLS-----YLLEMATEQQQAPWLHGFATGE----------- 121

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE + G+D+  I +   +  D  + ++G K F+++ + +D  I++A+    
Sbjct: 122 --TVGAIAMTEPQTGSDLRGIATTAVRDGDD-WVINGSKTFITNGILADLVIVVARTGTD 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-ED 311
            G       + +    G    R  +K+G  +  T EL F +        L V  G +   
Sbjct: 179 GGSRSFSLFVVERDTPGFERGRKLDKVGLAAQDTAELFFRDVRVPAGNMLGVEGGGLPAL 238

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+ L    L  AI        + A  + Y R+R   G  + +   +  A+A++   I   
Sbjct: 239 MRNLPRERLGIAIAGQCSAEAAFAWTLDYVRQRQAFGRPVAEFQTVGFALAELRTRIEVT 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   R     +     + +AA A+        W  +M   V+   ++  GG GY+ E  
Sbjct: 299 RAYIDRCVRELNRGTLSAVDAAKAKW-------WATEMQWKVVDTGVQLHGGYGYMTEYP 351

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           IAR + ++    I  G+   M   +   L +G
Sbjct: 352 IARAFLDARVQRIYGGTNEIMKEIISRDLVRG 383


>gi|301097310|ref|XP_002897750.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Phytophthora infestans T30-4]
 gi|262106771|gb|EEY64823.1| short/branched chain specific acyl-CoA dehydrogenase, putative
           [Phytophthora infestans T30-4]
          Length = 423

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 155/393 (39%), Gaps = 42/393 (10%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+   P++ +    G      E  P    +++    +GL        +  V       I 
Sbjct: 61  ADVIQPRVRSMDEAG------EMTP---EVIQGLFENGLLSVEIPMEYGGVGASFMSLIL 111

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                       G L     T  S + L   T    +++ P++               T+
Sbjct: 112 TIEELSRVDASVGLLCDLQNTVVSNLFLRYATEEQRQEYLPRL--------------STN 157

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRV 253
                 LTE   G+D  A+ ++    +DG  Y L+G K ++S+   +D F+++A V+  +
Sbjct: 158 TVGSFCLTEAESGSDAFALKTKADVSADGSHYTLNGEKMWISNVAHADVFLVMATVDPSL 217

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G   +   + +    GL +   + K+G  +++T  +   +     +    V     +   
Sbjct: 218 GYKGITCFIVERGTPGLSFGPPEKKLGLNASSTCSVILEDVK---IPKEKVLGKVGQGYA 274

Query: 314 ILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           I I  L+   + ++  ++ +AE     A+ Y   R   G  + D   M+   A++AL++A
Sbjct: 275 IAIGQLNEGRIGIAAQQLGIAEGAYRHAMPYLFERKQFGRAIGDFQAMQHQYAELALELA 334

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +A  L +  A   D      + +  A++ A        ++A    ++ +E +GG G+ ++
Sbjct: 335 SARLLVYNAARLKDAGHEFVKASCMAKLHA-------SRVAERTSSKCIELLGGVGFSKQ 387

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + YR+    +I  G+ N  +  +  L+++
Sbjct: 388 LMAEKFYRDCKVGTIYGGTSNVQLSTIARLVKQ 420


>gi|121609456|ref|YP_997263.1| isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121554096|gb|ABM58245.1| Isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 388

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 133/381 (34%), Gaps = 31/381 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  +       D+V   P    +++R    GL       ++          I AA    
Sbjct: 22  ELVPHEAEVAARDEV--PP---EIVQRMRGQGLFGYSIPAAYGGAGMTTEELILAALELS 76

Query: 143 MAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
              +     + + +   A  +    TP     + P + S  +                  
Sbjct: 77  QCAVAFRARVGTNTGIGAEALVADGTPAQKDKYLPMLASGAW-------------TSAFA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPR 260
           LTE   G+D  A+ ++  + +D         +  ++P++  F +LA+ +    G   +  
Sbjct: 124 LTEPEAGSDACALRTRALRDADHYLISGSKCFITNAPIAQLFTVLARTDPAHPGAGGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--I 316
            L +    GL   +   K+G   +    L F N        +      G    MK+L   
Sbjct: 184 FLVERDTPGLVVGKPYQKMGQAGSPVAPLYFDNCRVPAANLIGGQEGRGFKTAMKVLNKQ 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A + +      L EA+ +   R   G  +    +++  +AD   +I AA AL    
Sbjct: 244 RIHLAALCIGPAMRMLQEAVQHTAGRRQFGQPVGSFQLVQAMVADCQTEIHAARALVLET 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +  + +A+         KY+  +M   V    ++ +GG G+I +  + R YR+
Sbjct: 304 ARQRDLGQDVAMQASM-------CKYFASEMCARVADRCVQMLGGYGFIADNPVERFYRD 356

Query: 437 SPANSILLGSGNAMVLDVLNL 457
                +  G+     L++   
Sbjct: 357 VRLFRLYEGTSQIHQLNIARR 377


>gi|300704734|ref|YP_003746337.1| butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum CFBP2957]
 gi|299072398|emb|CBJ43743.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           CFBP2957]
          Length = 594

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/438 (20%), Positives = 175/438 (39%), Gaps = 57/438 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         +      +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 86  QGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEA 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + PK+ S E+  T             + LTE + G+D+A + ++ + + DG + + 
Sbjct: 144 QKQRFVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTFKIF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ L +     G+ N +   
Sbjct: 191 GTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVVPKFLVNDNGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L+F +     G L+G+ N     +  M         +  +     
Sbjct: 251 SIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSER 310

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YAR R  S            +I  P +KR +  +      A AL++  A + D
Sbjct: 311 AYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACD 370

Query: 382 EAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 E+AA  +  A      P+ K W  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 371 AGHHAEEDAARKQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDS 490
           ++    I  G+       L     +  G  +        + +E  L   G      +R  
Sbjct: 431 DARILPIYEGTTAIQANDLVGRKTVRDGGAVALGICAEMAKVEAALAVKGGAHCDAMRAR 490

Query: 491 ISLCKED-KGLARFLTEK 507
           ++  +E  + + RF+  +
Sbjct: 491 LAAGREAMEAVVRFVVAQ 508


>gi|282865002|ref|ZP_06274055.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559925|gb|EFB65474.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 385

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    G+        F     +++ K  A      A+       S       +  
Sbjct: 40  RDFYYKLAELGIFGIEVPEEFGG-AGEESFKYEAIIYEETARAGVSFGGSGVHVLLCLPY 98

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    T    K W P   S                   + +TE   G+D+A + +  +  
Sbjct: 99  LKAYATEEQKKRWLPDFVSG-------------RSMYAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+ +          +  L+ D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTDAPRPDDRRHGISLLVVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G + + T EL F +       LLG+ N     +        L  A+ + +    ++ 
Sbjct: 206 DKLGLKVSDTAELSFVDVKVPVEDLLGEENKGFSYLGQNLPQERLGIAVGAYAQASAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAQQYTQDRTVFGKTVASFQNTKFELAACKAEVDAAEAVCDRAIEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|225181981|ref|ZP_03735414.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167343|gb|EEG76161.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 592

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/469 (18%), Positives = 152/469 (32%), Gaps = 50/469 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+++    G   S     F      +   +            +    + +      +   
Sbjct: 63  LMKQMGELGFLGSDIPEKFGGSEADKITSLIITEQVSRGGSFSVAFGAHTGIGTLPILFF 122

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K + P + S                     LTE   G+D     ++     DG 
Sbjct: 123 GNEEQKKKYLPGLASG-------------QKIAAYALTEADAGSDAMNAKTKAVLTEDGK 169

Query: 226 -YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+++   +D  I  A+++G          + D    G+     ++K+G + 
Sbjct: 170 HYVLNGSKQFITNAAWADVIIAYAKIDGEK----FTAFIVDRDTPGVSIGAEEHKLGIKG 225

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T  + F +    +   L  +  G      IL        +      + +L  A  YA+
Sbjct: 226 SSTASVIFEDAKVPVENVLGQIGKGHQVAFNILNIGRYKLGVGCSGAAKYALEVASAYAQ 285

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------------DEAKSRSE 388
            R      +    ++K  IAD+ +      ++ +R                 D  +  SE
Sbjct: 286 ERQQFNLPIAKFGMIKNKIADMNIHTYITESICYRTGGLINSLVENLDMDAEDAGQKVSE 345

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                     I K    +    V  E ++ +GG GY  E    R YR+S  N I  G+  
Sbjct: 346 GIQEYATECSIVKIVGSEALDFVADECVQILGGYGYCSEYPAERIYRDSRINRIFEGTNE 405

Query: 449 AMVLDV----LNLLEKGT-NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
              L +    L   +KG   L E      E+ L  S  +    L     L KE++ +  F
Sbjct: 406 INRLIIPATLLRKAQKGEIPLIEAAMKLQEELLMPSMPEDSDEL-----LGKEEQAIENF 460

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH----CMLHGR 548
             +KI L  S  A  + G   I +  +  R  D           ML  R
Sbjct: 461 --KKIFLLVSGTAAQKYGEKLIKEQEILGRMADMVDEVFSAESAMLRAR 507


>gi|239979569|ref|ZP_04702093.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 391

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/411 (19%), Positives = 146/411 (35%), Gaps = 35/411 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 4   DHRLSAEHEELRRTVEAF-----AHDVIAPKIGDLYERHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    ++W P++ +
Sbjct: 59  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPIHLFGTEEQKREWLPRLCA 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E             +    GLTE   G+D     +  +       + ++G K F+++  
Sbjct: 119 GE-------------ILGAFGLTEPGAGSDAGGTRTTARLDEATDEWVINGGKCFITNSG 165

Query: 240 SD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G  L+  ++      G       +K+G  ++ T EL F    
Sbjct: 166 TDITGLVTVTAVTGRKPDGSPLISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFDEVR 225

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G  + ++IL    +  A +     +  + E++ YA  RH  G  +   
Sbjct: 226 VPAANLLGEQGRGYAQFLRILDEGRIAIAALGTGLAQGCVDESVKYAAERHAFGKPIGAN 285

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+      A       A+     +   ++AA A       K     +A    
Sbjct: 286 QAIQFKIADMDTRAYTARLAWRDAASRLVAGEPFKKQAAAA-------KLHSSTVAVDNA 338

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +A +  GG G++ E  +AR +R+S    I  G+     + +   L  G  
Sbjct: 339 RDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIARELGVGGG 389


>gi|218777966|ref|YP_002429284.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759350|gb|ACL01816.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 606

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/488 (17%), Positives = 187/488 (38%), Gaps = 59/488 (12%)

Query: 82  PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P +      G R++  +V+   ++H      +         +                A 
Sbjct: 57  PTMQEGDRQGVRYENNEVKVPDSFHRPHELLLEGEWQNLGVEPEMGGQGAPAFISSATAE 116

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +++ A        +    ++ M+    T      + PKI + E+  T             
Sbjct: 117 MFMAASWACYSYATMGNGTSDMIEKYGTQEQKDLYIPKITTGEWGGT------------- 163

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   GTD+ A+T+   K  DG Y L+G+K F+++   D        +LA++EG   
Sbjct: 164 MLLTEPDAGTDVGALTTTAVKNDDGTYSLTGNKIFITNGEHDLCENIIHPVLARIEGDPA 223

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+   +     G  N +    +++K G +++AT ++   +     GFLLG
Sbjct: 224 GTKGISIFIVPKYFVNPDGSLGDRNDILCTGVEHKHGIKASATCQMSMGSKGKCIGFLLG 283

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------GGI--- 348
                   + +M     + + + +++    S  +A++YAR R            G     
Sbjct: 284 KEREGMKVMFNMMNGARMATGLQALAYASASYLDALNYARDRIQGRSIDDMANHGAPPVA 343

Query: 349 LIDQPVMKRAIADIALDIAAAT-------ALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           +I+ P ++R +  +   +            L+ + A + DE + +        +M P+ K
Sbjct: 344 IINHPDVRRNLLWMKSYVCGFRSFFQYSSMLATKAAMAEDEEERKLNNG-LYELMTPLIK 402

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---L 458
            +   +   V  + ++  GG G+ ++    ++ R+    SI  G+     +D+L     +
Sbjct: 403 AYLSDLGYEVCVQGIQVYGGVGFCQDFLAEQYARDCKITSIYEGTSGIQSMDLLGRKLGM 462

Query: 459 EKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
           EKG  +F      + + +  + G++ +  L + +       G       K A++    A 
Sbjct: 463 EKG-KVFMAFMGEVGKTIAKAKGQEALKGLAEDLEAALNRLGETAMHLGKTAVSPDFKAA 521

Query: 518 YRAGMNDI 525
           +   +  +
Sbjct: 522 FAHSLPFL 529


>gi|328886458|emb|CCA59697.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 383

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 136/381 (35%), Gaps = 29/381 (7%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLY 141
            L  Y       D +    AW A    +   GL     D  +         +    A  +
Sbjct: 25  VLPHYAQW--EKDGIVSREAWLA----AGRQGLLGLAVDEEYGGGGNPDFRYGAVLAEEF 78

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A      +   +      +  + T    + W P   S E             +   + 
Sbjct: 79  TRAGAPGLAIGLHNDIIGPYLTSLGTEEQKRRWLPGFCSGE-------------IVTAIA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  +++A+     G   +  
Sbjct: 126 MTEPGAGSDLQGIRTTAEDHGDH-WILNGSKTFISNGILADLVVVVARTTPEGGAHGLSL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           L+ +    G    R  +KIG +S  T EL F +       LLG+LN +   +        
Sbjct: 185 LVVERGAEGFERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGELNGAFVHLMTNLAQER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+  ++G    L     Y + R   G  L     ++  IA++A + A       R  
Sbjct: 245 LAIAVAGIAGAEHLLELTTRYVKEREAFGRPLARLQHIRFEIAEMATECAVTRTFVDRCI 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
               E     + A    + A + K+W  ++   V    ++  GG GY+ E  +AR Y + 
Sbjct: 305 ----EEHCDQDGAGLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEFPVARAYTDG 360

Query: 438 PANSILLGSGNAMVLDVLNLL 458
              +I  G+   M   +   L
Sbjct: 361 RIQTIYGGTTEIMKEIIGRSL 381


>gi|187927891|ref|YP_001898378.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187724781|gb|ACD25946.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 594

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/448 (19%), Positives = 178/448 (39%), Gaps = 57/448 (12%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +     +    G         +      +   I  A + ++        + P +T  ++
Sbjct: 76  GFKEAFAQFGQGGWQGVQHPLEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAI 133

Query: 162 VALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL+T  T    + + PK+ S E+  T             + LTE + G+D+A + ++ +
Sbjct: 134 EALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAE 180

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
            + DG + + G K F++    D       ++LA+  G       +  F+VP+ + +    
Sbjct: 181 PVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVVPKFMVNEDGS 240

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G+ N      +++K+G +++ T  L+F +     G L+G+ N     +  M        
Sbjct: 241 LGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRGLEYMFIMMNAARYAV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATA 371
            +  +     +  +A+ YAR R  S            +I  P +KR +  +      A A
Sbjct: 301 GMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARA 360

Query: 372 LSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++  A + D          R + AA    + PI K W  +M+  V +  ++  GG G+I
Sbjct: 361 LAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSIDVTSLGVQVHGGMGFI 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL---EQDLGSSG 480
           EE   A+ YR++    I  G+      D++    +  G  +   + + +   E  L + G
Sbjct: 421 EETGAAQFYRDARILPIYEGTTAIQANDLIGRKTVRDGGAVASGICAEIAKVEAALAAKG 480

Query: 481 KKVITILRDSISLCKED-KGLARFLTEK 507
                 +R  ++  +E  + + RF+  +
Sbjct: 481 GAHCDAMRARLAAGREALESVVRFVVAQ 508


>gi|118151232|ref|NP_001071544.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Bos taurus]
 gi|75775518|gb|AAI05214.1| Acyl-Coenzyme A dehydrogenase family, member 9 [Bos taurus]
          Length = 594

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/460 (18%), Positives = 165/460 (35%), Gaps = 50/460 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R A +  +    A  L
Sbjct: 84  RKIDQEGKIPD--ETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLAEVIGLDASIAVTL 141

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +      + P++ S E+                  LTE   G+D 
Sbjct: 142 AAHQSIGLKGIILAGSKEQKARYLPRLASGEH-------------VAAFCLTEPASGSDA 188

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++    +D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 189 ASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVKDK-ITAFIVE 247

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    NV        K+ +  L+S   
Sbjct: 248 RDFGGVTNGKAEDKMGIRGSNTCEVHFENTRVPV---ENVLGEVGGGFKVAVNILNSGRF 304

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  M        +     YA  R      L +  +++   + +A       ++++  A 
Sbjct: 305 SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFSLMAQKAYVMESMAYLTAA 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D             I A + K +  + A   ++EA++ +GG GY+ +    R  R+S 
Sbjct: 365 MLDAPGFPD-----CSIEAAMVKVFSSEGAWTCVSEALQILGGLGYMRDYPYERLLRDSR 419

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L++ ++ +    V   LRDS+    +
Sbjct: 420 ILLIFEGTNEILRMYIALTGLQHAGRILTARVKELKRGNVTTIMDTVGQRLRDSLGRTVD 479

Query: 497 ----------DKGLARFLTEKIALASSAAALYR-AGMNDI 525
                        LA  + E++ L   A  L    GM  +
Sbjct: 480 LGLTGKLGVVHPSLATIVEEQLVLKRVANVLINLYGMTAV 519


>gi|332528089|ref|ZP_08404120.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332112660|gb|EGJ12453.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 591

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 90/495 (18%), Positives = 187/495 (37%), Gaps = 54/495 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVE 98
           ++  L            E  G    +   +E AR        L+      P      +V 
Sbjct: 13  VMKELAGLDAVAALPGFEDAGFDTAAAVLEECARFNENVVAPLNRVGDLDPSSFADGQVR 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    ++    G         F      +   I AA   ++        + P ++ 
Sbjct: 73  ATPGFKQAFQQFAEGGWQGLQHPVEFGGQGLPK--LIGAACGEMVNSASISFALCPLLSD 130

Query: 159 ASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            ++ AL+T  +  + + + P + S  +  T             + LTE + G+D++ + +
Sbjct: 131 GAIEALLTAGSHEMQQAYIPNLISGRWTGT-------------MNLTEPQAGSDLSLVRT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDG 265
           + +   DG Y + G K F++    D       ++LA+V G       +  F+ P++L DG
Sbjct: 178 RAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARVTGAPEGVKGISLFVCPKVLADG 237

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           + N +    +++K+G +++ T  L+F +     G+L+G+ N     +  M         +
Sbjct: 238 TRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRGLEYMFIMMNAARFGVGV 297

Query: 323 MSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALS 373
             ++    +  +A+ YAR R  S            +I  P ++R +  +        A++
Sbjct: 298 QGIALAERAYQQAVAYARDRVQSRPVDGSTPGAAAIIRHPDVRRMLMTMRAHTEGCRAMA 357

Query: 374 FRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              A ++D A +      R +  A+   + P+ K    +M+  V +  ++  GG G+IEE
Sbjct: 358 LVAAAAYDAAHAHPDAAARKQNQAFYEFLVPLVKGLSTEMSLDVASLGVQVHGGMGFIEE 417

Query: 428 RSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ---DLGSSGKK 482
              A+H R++   +I  G+       L        G      + + +E    +L +SG  
Sbjct: 418 TGAAQHLRDAKILTIYEGTTAIQANDLVGRKTARDGGATARAIAAQIEATEGELNASGSA 477

Query: 483 VITILRDSISLCKED 497
               +   +   +  
Sbjct: 478 AALAMARHLGAARRA 492


>gi|302545213|ref|ZP_07297555.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462831|gb|EFL25924.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 388

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 149/409 (36%), Gaps = 41/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  +  E H   + ++R     GL    + 
Sbjct: 4   DHRLSPEHEELRRTVEAF-----AHDVVAPKIGEYWEHHEFPYEIIREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +         A           A  L +     A  + L  T    + W P + S
Sbjct: 59  EEYGGMGGDYFALCLALEELARVDSSVAITLEAGVSLGAMPIFLYGTEEQKRQWLPGLCS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D  A  +  +     G + ++G K F+++  
Sbjct: 119 GE-------------TLGAFGLTEPGGGSDAGATRTTARLDEATGEWVINGTKCFITNSG 165

Query: 240 SDA---FIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D      + A  +    G   +  ++      GL      +K+G  ++ T EL F++  
Sbjct: 166 TDITALITVTAVTDRTEDGRPKISSIIVPSGTPGLSVAAPYSKVGWNASDTRELSFADCR 225

Query: 296 GFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
                 L  +  G  + ++I   LD   +++S +   LA     E++ YAR R   G  +
Sbjct: 226 VPAANLLGDLGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVSYARTREAFGRPI 282

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+ +    A       A+     +S  +E       A I K +  ++A 
Sbjct: 283 GANQAIQFKIADMEMRAHMARVAWRDAASRLVSGESFKKE-------ASIAKLYSSEVAV 335

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 336 TNAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|262201223|ref|YP_003272431.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084570|gb|ACY20538.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 379

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 124/369 (33%), Gaps = 26/369 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+ E    +   L       GL    +   ++   +     ++               +
Sbjct: 31  VDEHEKAQTYPEGLFAELGEAGLLGLPYPTEWDGGGQPYEVYLQVLEELGARWAAVAVAV 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S    +   +    T    + W P +                 +     L+E + G+D A
Sbjct: 91  SVHGLACHPLMNFGTDEQKQRWLPDLL-------------NGKLIGAYSLSEPQAGSDAA 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+  +      G        W     ++D + + A+     G   +   L     +GL +
Sbjct: 138 ALNCRAVVADGGYRINGAKAWITHGGIADVYNVFART--GEGSKGISCFLVARDTDGLRF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            + ++K+G  +  T    + +       L+G                 L  A ++    +
Sbjct: 196 GKPEDKMGLHAVPTTAANYDDALVDADRLIGTEGQGLPIAFSALDSGRLGIAAVATGLAQ 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  +ID   +   +AD+A  + +A A     A   D   + S  
Sbjct: 256 AALDAAVEYAQERTTFGRKIIDHQGLSFVLADMAAAVDSARATYLDAARRRDAGMTYSRA 315

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A+++A          A  V  +A++  GG GY  +  + R+ RE+    I  G+   
Sbjct: 316 AATAKLVA-------TDAAMKVTTDAVQVFGGYGYTRDFPVERYMREAKITQIFEGTNQI 368

Query: 450 MVLDVLNLL 458
             L +   L
Sbjct: 369 QRLVIGRAL 377


>gi|159466250|ref|XP_001691322.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279294|gb|EDP05055.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 429

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 140/429 (32%), Gaps = 40/429 (9%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
            L  L ++ P V   E             QE A+ A           P  E  D+    P
Sbjct: 21  ALRRLFSSAPEVSQAESSAGALKEFRAQVQEFAQQA---------IAPHAEAIDRENDFP 71

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSAS 160
               L +     GL        +  +    + H +    +   +        + S    +
Sbjct: 72  TSVNLWKELGSFGLLGITAPSEYGGLGLGYSEHCVAMEEISRASGAVGLSYGAHSNLCVN 131

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +P     + PK+ + E+                L ++E   G+D+ ++  + ++
Sbjct: 132 QIVRNASPAQKAKYLPKLITGEH-------------VGALAMSEPGSGSDVVSMKCRAER 178

Query: 221 ISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  G            W  + P ++  ++ A+ +   G   +   L +    G    +  
Sbjct: 179 VGGGADERYVLNGNKMWCTNGPKANVLVVYAKTDPAAGPRGITAFLIEKGMKGFSTAQKL 238

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           +K+G R + T EL F N        L      V  M  +  LD   + ++     L  A 
Sbjct: 239 DKLGMRGSDTCELVFENCEVPAENVLGGVGRGVAVM--MSGLDYERLVLAAGPCGLMAAA 296

Query: 337 HYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
             A      +R   G  + +  +++  +AD+   + ++ A  + +A + D          
Sbjct: 297 LDAALPYATQRKQFGQAIGEFQLIQGKLADMYTRLQSSRAYVYAVAAAADSGTPADR--- 353

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                         + A     +A++ +GG+GYI +    R  R++    I  G+     
Sbjct: 354 ---KDCASVILMAAENATQSALDAIQILGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRR 410

Query: 452 LDVLNLLEK 460
             +   L K
Sbjct: 411 YLIGRELFK 419


>gi|58259503|ref|XP_567164.1| Isovaleryl-CoA dehydrogenase 2 mitochondrial precursor
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223301|gb|AAW41345.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 417

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 138/401 (34%), Gaps = 30/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
                  AQE  R    +  Q     P     D+    P    +  +    GL       
Sbjct: 31  AVAGLTEAQEEFRSVVQHFAQ-KEIAPRAAEIDRTNKLP--QDIFPKLGEMGLLGVTVPE 87

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +      H I    +   +   A    + S    + +    T +    + P + + 
Sbjct: 88  RWGGLGLGYLEHTIAMEEISRASASVALSYGAHSNLLVNQLVRWGTEKQLSKYLPPLLTG 147

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239
           ++                L ++E   G+D+ ++ +   +    +G        W  ++P+
Sbjct: 148 KH-------------IGSLAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPV 194

Query: 240 SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           S  F++ A+ +  V     +   L +    G       +K G R + T EL F N     
Sbjct: 195 SSTFLIYAKSDTNVAPSKGMTAFLVEKGWKGFEVGEGLDKFGMRGSPTAELFFDNVKIPE 254

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L         +   + L+  ++S   +  M+ +L  A+ Y   R   G  +    +M
Sbjct: 255 ENVLGKVGNGALVLMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLM 314

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+   ++A+ A  + +A + D       + A A         +    A  V  EA
Sbjct: 315 QGKLADMYTKLSASRAYVYAVARACDAGMISRRDCAGA-------ILYSSDRAVEVAIEA 367

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +C+GG+GYI +    R  R+S   ++  G+     + +  
Sbjct: 368 QQCLGGNGYINDYPAGRLVRDSRLYTVGAGTQEIRRMLIGR 408


>gi|117927614|ref|YP_872165.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B]
 gi|117648077|gb|ABK52179.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B]
          Length = 388

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 124/361 (34%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
           + L+ +    GL    +   +            A           A  L +     A  +
Sbjct: 44  YELVAQMARLGLFGLPFPEEYGGSGGDYFALCLAVEELARVDSSLAITLEAAVSLGAMPI 103

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P             P+ +       GLTE  GG+D  A  ++     
Sbjct: 104 YRFGTEEQRRRWLP-------------PLARGERLGAFGLTEPGGGSDAGATATRAVPDG 150

Query: 223 DGIYCLSGHKWFLSSP--MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG        +  ++   ++    + A    R G   +   +     +GL      +K+G
Sbjct: 151 DGWRIRGTKAFITNAGTEITSVITVTAITGQRDGEKEISSFIVPVPSSGLTVSPPYSKVG 210

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
             ++ T ++   + +      L     G    + IL    +  A ++V   +  L EA+ 
Sbjct: 211 WHASDTRQVFLDDVYVPADHLLGDRGRGYANFLAILDEGRIAIAALAVGLAQGCLDEALR 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  RH  G  +     ++  +AD+A  +  A    +  A      K   ++AA      
Sbjct: 271 YAGERHAFGRPIGAFQAIQFKLADMAARVHTARLAYYDAARRMLAGKPFKDQAA------ 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +   +A     +A +  GG+G+I E  +AR +R++    I  G+     + +   
Sbjct: 325 -IAKLYASDVAVCNARDATQIFGGAGFINETPVARFWRDAKILEIGEGTSEVQRMVIARG 383

Query: 458 L 458
           L
Sbjct: 384 L 384


>gi|167537016|ref|XP_001750178.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771340|gb|EDQ85008.1| predicted protein [Monosiga brevicollis MX1]
          Length = 384

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 124/384 (32%), Gaps = 35/384 (9%)

Query: 78  NYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
               P    +   GE  WD          ++R +   GL        F  +         
Sbjct: 18  EKIAPVAAHHDETGEFPWD----------IIREAHGLGLMNVHIPEEFGGLGLGGVDCCI 67

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            A             +     + S + +       K +  ++              +  +
Sbjct: 68  IAENLAYGCSGISTAIGGPTLAESPLLVGANTEQKKKYLGRMT-------------EEPL 114

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC- 255
                +TE   G+D+  + +   +  D         W   +  ++ F +LA+ +      
Sbjct: 115 IAAYCVTEPGCGSDVNGVQTSAVQKGDDWVINGNKMWITGAGHANWFFVLARTDKDAKAS 174

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
                 + DG   G+   R ++ +G R++ T  + F +        L  V  G +  MK 
Sbjct: 175 KAFTGFIVDGDTPGITLGRKEDNMGQRASDTRAVTFEDVVVPKENVLGEVGKGFLLAMKA 234

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                 +    +V   + +L EA  Y+  R   G  +     +   +AD+ ++  AA  L
Sbjct: 235 FDITRPEVGAGAVGLAQRALDEATKYSLERKTFGVPIAKHQAVAHMLADMEINTQAARWL 294

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A   D+ +  +         A   K +    A     +A++  GG+GY     + +
Sbjct: 295 TLRGAWELDQGRPPT-------FYASQAKAFAADNAIRCARDAVQIFGGNGYSRSMPVEK 347

Query: 433 HYRESPANSILLGSGNAMVLDVLN 456
             R++   +I  G+G      +  
Sbjct: 348 LVRDAAIFNIYEGTGQIQREIISR 371


>gi|255321061|ref|ZP_05362231.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262379559|ref|ZP_06072715.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255301885|gb|EET81132.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262299016|gb|EEY86929.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 379

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 128/380 (33%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+W++    P    +      +G  C      +        + +        A
Sbjct: 20  EHIAPHYEQWERDGIMP--RHVWNLLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 77

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              +    +   S  +A  +  + +    + W PK+ S E             V   +G+
Sbjct: 78  GYSSLSTGISCHSEIAAPYILNIGSEEQKQYWLPKMVSGE-------------VVGAIGM 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 125 TEPGAGSDLQSMRTNAILQ-DDSYILNGSKTFISNGQHADLVVLAAKTDPQARAKGVSLL 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D   +G       +KIG  S  T E+ F N       LLG        +         
Sbjct: 184 LLDTHLDGFKKGTNLDKIGLHSQDTSEMFFDNIKVPQNQLLGQPGQGFAYLMQELPRERT 243

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R S+     Y + R   G  +      +  +A   +D  A  A   R   
Sbjct: 244 AIAATALGAIRGSIDVTTAYVQERQAFGQPIAQFQNTRFVLAQAKIDELATAAFYERNVE 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + + +            A   K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 304 LYQQGQ-------LDVATAAALKSFSTDMQMKVADNLLQLFGGYGYMSEYPISRFFVDAR 356

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 357 IQRIYGGTNEIMKEIVARSL 376


>gi|313794157|gb|EFS42177.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA1]
 gi|315078300|gb|EFT50339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA2]
 gi|327457590|gb|EGF04245.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL092PA1]
          Length = 382

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIITEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFILNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|312131585|ref|YP_003998925.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311908131|gb|ADQ18572.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 595

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 138/386 (35%), Gaps = 33/386 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  DK        +L+ ++   GL  +     +          +  A +       +   
Sbjct: 51  DEIDKAGSPELISSLMDKAGELGLLGTAVPEEYGGFGMNFNTSMLVAEVLGAGHSFSVAQ 110

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +           + PK+ S E+                  LTE   G+D 
Sbjct: 111 SAHTGIGTLPIVYYGNEEQKAKYLPKLASGEWK-------------AAYCLTEPDSGSDA 157

Query: 212 AAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  ++ +   DG          W  +   +D FI+ A++E       +   + + S  G
Sbjct: 158 NSGKTKAELTEDGKFYKINGQKMWITNGGFADIFIVFAKIEDDK---NLTAFIVEKSFGG 214

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVS 326
           +     ++K+G + + T ++ F++    +   L     G    + IL    +  A+ +V 
Sbjct: 215 ITMNEPEHKMGIKGSDTRQIFFNDCMVPVENMLSKRENGFKIAVNILNVGRIKLAVAAVG 274

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---- 382
           G +  +  AI+YA  R   G  +     +K  +A++A+ I       +R   + D+    
Sbjct: 275 GSKGVINHAINYANERKQFGISIGRFGAIKHKLAEMAIRIWTTETACYRAGQNIDDLIDS 334

Query: 383 --------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                   A ++ +      I   I K    +    V  E ++  GG GY  +  + R Y
Sbjct: 335 LTASGMSDADAKLKALEQYAIECAILKVNGSETLDYVADEGVQVYGGMGYSADAPMDRAY 394

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R+S  N I  G+     + VL++L K
Sbjct: 395 RDSRINRIFEGTNEINRMLVLDMLLK 420


>gi|149927086|ref|ZP_01915344.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter
           sp. MED105]
 gi|149824307|gb|EDM83527.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter
           sp. MED105]
          Length = 490

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 82/416 (19%), Positives = 171/416 (41%), Gaps = 60/416 (14%)

Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           + ++        + P +T  ++ AL    + ++ + + PK+ S E+  T           
Sbjct: 1   MEMVNGANLSFALCPLLTDGAIEALLVAGSQQLKETYIPKMISGEWTGT----------- 49

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
             + LTE + G+D+A + S+     DG Y +SG K +++    D       ++LA+    
Sbjct: 50  --MNLTEPQAGSDLALVRSKAVPQGDGTYRISGQKIYITYGEHDMAGNIVHLVLARTPDA 107

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN-------- 293
                 +  F+VP+ L +     G  N +    +++K+G +++ T  L + +        
Sbjct: 108 PEGVKGISLFVVPKFLVNEDGSLGKRNDVYCASIEHKLGIKASPTAVLLYGDNKGEVGQG 167

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------ 347
             G+L+G+ N     +  M         +  +     +  +A+ YA  R  S        
Sbjct: 168 AIGYLVGEENKGLQYMFVMMNAARFQVGVQGIGLAERAYQKAVQYANDRVQSRPVDGSAN 227

Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------P 398
               +I  P +KR +  +   + AA A++     ++D A   ++EA   + MA      P
Sbjct: 228 EAVAIIHHPDVKRMLMSMRSQVEAARAMACVAGAAYDAAHFHADEATRKQNMAVYEFMVP 287

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K W  +M+  V +  ++  GG G+IEE   A++YR++   +I  G+      D++   
Sbjct: 288 LVKGWSTEMSIDVTSTGVQVHGGMGFIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRK 347

Query: 459 --EKGTNLFEQLFSTLEQ---DLGSSGKKVITILRDSISLCKED-KGLARFLTEKI 508
               G  + + L + + +    L  SG      +   +   +      A+F+ + +
Sbjct: 348 TSRDGGAMVKALCAEIARTVVQLNESGSAHAKAVAARLDAARASFLDAAQFVVDNM 403


>gi|218781220|ref|YP_002432538.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762604|gb|ACL05070.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 604

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 166/453 (36%), Gaps = 57/453 (12%)

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +   V+    +     + I +       D               A    +   
Sbjct: 61  DRQGVRLEDGTVKVPDCFKKPFAQFIENEWMSLTEDPEMGGQGLPHLIATAATEYLVGPN 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +     +  M+ L  T      +   +++ ++  T             + LTE 
Sbjct: 121 FAFAGYLGMGHGTGKMIELYGTEAQKSLFVKNLYTCKWAGT-------------MMLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
             G+D+ A+T+      DG Y ++G+K F++    D        +LA++EG       V 
Sbjct: 168 EAGSDVGALTTTAVPNEDGSYSITGNKIFITVGDHDLTENIIHAVLARIEGAPAGTAGVS 227

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVST 306
            F+VP++  +     G PN +    L+ K+G   +AT  +         GFLLG+ N   
Sbjct: 228 LFIVPKIRVNEDGSLGIPNDVICTGLEEKMGIHGSATCSMALGSKGQCQGFLLGEANKGM 287

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQP 353
             +  M     L  ++ S+     +   A +YA+ R   G               ++  P
Sbjct: 288 RAMFHMMNEARLAVSMQSLGIASTAYLHAANYAKERVQ-GRDLSDMLNKDAVSVPIVRHP 346

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKM 407
            ++R +  +   +    +  + +A+  ++ ++  +            ++ PI K +  K 
Sbjct: 347 DVRRMLTWMKAYVDGMRSFVYFIADCIEKEENSQDIEEHKRCKGLVDLLTPIIKTYNAKY 406

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLF 465
              V  +A++  GG GYI E  + +  R++   S+  G+     +D+L   +  +   +F
Sbjct: 407 GFEVCVQAIQTYGGYGYIREYPVEQLLRDAKITSLYEGTDGVQAMDLLARKIGMEQGAVF 466

Query: 466 EQLFSTLEQDLGSSGK-KVITILRDSISLCKED 497
           +     +   +  + K   +  + D++  C +D
Sbjct: 467 QSFIKEINNVIDRARKSDALASMADAVDQCLKD 499


>gi|6978431|ref|NP_036951.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Rattus norvegicus]
 gi|113016|sp|P15650|ACADL_RAT RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|202685|gb|AAA40668.1| long chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Rattus
           norvegicus]
 gi|205145|gb|AAA41514.1| long chain acyl-CoA dehydrogenase [Rattus norvegicus]
 gi|38541337|gb|AAH62006.1| Acyl-Coenzyme A dehydrogenase, long-chain [Rattus norvegicus]
 gi|149016009|gb|EDL75290.1| acetyl-Coenzyme A dehydrogenase, long-chain, isoform CRA_a [Rattus
           norvegicus]
 gi|227488|prf||1704376A long chain acyl-CoA dehydrogenase
          Length = 430

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 129/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + +H  W         L  ++   GL           +                +     
Sbjct: 73  IPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +A   T    + + P++ + +                 + +TE   G+
Sbjct: 133 GFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  ++     + L+G K F+++   SD  I++A    E R     +   L +  
Sbjct: 180 DLQGVRTNAKRSGSD-WILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +  +K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 239 MKGFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADL 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y R+R   G  +     ++  +A++  +I    A         +  
Sbjct: 299 AISACEFMFEETRNYVRQRKAFGKTVAHIQTVQHKLAELKTNICVTRAFVDSCLQLHETK 358

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  S  A+ A       KYW  ++   V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 359 RLDSASASMA-------KYWASELQNTVAYQCVQLHGGWGYMWEYPIAKAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIARQI 426


>gi|326436268|gb|EGD81838.1| long-chain specific acyl-CoA dehydrogenase [Salpingoeca sp. ATCC
           50818]
          Length = 436

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 125/371 (33%), Gaps = 34/371 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            H AW             +   GL        +                   A L     
Sbjct: 85  HHDAWEKEGMVSRDAWTEAGELGLLGITIPEEYGGPGADVQSAAVMWEEQAYAGLFGPGY 144

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +    T    + + P   + +                 + +TE   G+D+
Sbjct: 145 AIHSDIVLPYIHHYGTEEQKQKYLPDACAGKC-------------ITAIAMTEPGAGSDL 191

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE--GRVGCFLVPRLLEDGSPN 268
             +++   K  D  + L+G K F+S+   SDA +++A+ +   +     +   + D    
Sbjct: 192 QGVSTTAIKDGDE-WVLNGSKVFISNGQLSDAVVVVAKTDLEAKRAAHGLSLFIVDAGTP 250

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    +  +K+G ++  T EL F +       LLG LN     +        L   +M+V
Sbjct: 251 GFSKGKNLHKMGLKAQDTSELFFEDCRVPESALLGQLNKGFYHLMTELPQERLLLGVMAV 310

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +           Y   R    G L +   ++  +A++  DIA   A + +      E + 
Sbjct: 311 AHAEACYEWTREYINERKAFSGTLANLQTVRHKMAELKTDIAVCRAFADQCILLHSEGRL 370

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +E       MA + KYWC  +   V    ++  GG GY+ E  + R Y ++    I  G
Sbjct: 371 NTE-------MASMVKYWCTDLESRVADACVQLHGGYGYMWEYPVCRAYVDARVQRIYGG 423

Query: 446 SGNAMVLDVLN 456
           +   M   +  
Sbjct: 424 ANEIMKELISR 434


>gi|186683598|ref|YP_001866794.1| acyl-CoA dehydrogenase domain-containing protein [Nostoc
           punctiforme PCC 73102]
 gi|186466050|gb|ACC81851.1| acyl-CoA dehydrogenase domain protein [Nostoc punctiforme PCC
           73102]
          Length = 394

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 133/370 (35%), Gaps = 32/370 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
             ++D+ E+ P+   L+++        ++  + F                          
Sbjct: 28  ANQYDQQEYTPS--DLVQKFAQKRYLGAVLPKEFGGEAMDMITYGLLNEEIGRGCSSLRS 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L++     +  +          DW PK+ S E             +     L+E   G+D
Sbjct: 86  LLTVHCMVSHALCKWGNKSQKNDWLPKLASGE-------------IIAAFALSEPNVGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             ++ +      D        KW     ++D F++ AQ EG+   FLV     + +  GL
Sbjct: 133 AKSVETTATLSGDAYILNGHKKWITYGQIADVFLVFAQCEGKPSAFLV-----EKNSPGL 187

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             + +   +G R++   EL  ++        +    G          LD    SV+   V
Sbjct: 188 SIKPIFGMLGVRASMLAELHLNDCRIPQENLVGRL-GFGFSYVASSALDYGRYSVAWGSV 246

Query: 331 SLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A+A       Y   R   G  L +  ++++ I ++  +I AA  L ++     +    
Sbjct: 247 GIAQACLSACIRYTSDRKQFGVYLKEHQLIRQMITNMIANIKAARLLCYQAGYLKEIGDP 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S       I   I KY+   +A  V ++A++  GG+G   E  + R+ R++    I+ G
Sbjct: 307 SS------IIETSIAKYFTSTIASQVASDAVQIHGGNGCSSEYPVERYLRDAKIMEIIEG 360

Query: 446 SGNAMVLDVL 455
           S     + + 
Sbjct: 361 STQIQQVTIA 370


>gi|329889533|ref|ZP_08267876.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328844834|gb|EGF94398.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 594

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/510 (17%), Positives = 174/510 (34%), Gaps = 55/510 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSI 119
             V S       + +      L       G ++    V   P +    ++    G     
Sbjct: 34  ADVASAVLDAAGQFSEEVLAPLNRPGDLAGAKYANGAVTAAPGFADAYQQFAAGGWTSLT 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
                      +A ++ A      A +  G     S+ S   +  +        + PK+ 
Sbjct: 94  ASVEAGGQALPKALELAAYETVHAANMAFGLCPMLSLASIEALEQVGNEHQKATYLPKLV 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                + LTE   G+D+ A+T+      DG Y L+G K F++   
Sbjct: 154 SGEW-------------TGAMVLTEPHAGSDLGALTATAVPNGDGTYALTGQKIFITWGD 200

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++         +  FL P+   +     G  N      +++K+G  +
Sbjct: 201 HDATDNIVHLVLARLPDAPAGPKGISLFLTPKFAVNADGSLGERNAFRPVGVEHKLGIHA 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           + T  + +      L+G  N     +  M     L   +  V     +   A+ YA  R 
Sbjct: 261 SPTCVMSYEGARAELVGQPNQGLAHMFVMMNAARLAVGVEGVGIAERAYQHALAYALERR 320

Query: 344 V--------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
                        + D P ++R ++ +   +AAA A+      + D A+  S E      
Sbjct: 321 QGRSVWTGEKDAPIFDHPDVRRMLSVMKAKVAAARAICLSTGVAADLARHASSEEERKAW 380

Query: 396 ------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                   PI K W   +   V +  ++  GG G+IEE   A++YR++    I  G+   
Sbjct: 381 KGREDLFTPIAKAWSTDVGCEVASLGVQVHGGMGFIEETGAAQYYRDARITPIYEGTNGI 440

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK-KVITILRDSISLCKEDKGLARFLTE 506
             +D++   L   G    + L + ++  L    +      +    +  +  +    +L +
Sbjct: 441 QAMDLVGRKLSMDGGESAKALIAEMKATLAQIDRLYAGKPVERFATAIEAVEDATLWLLD 500

Query: 507 ------KIALASSAAALYRAGMNDIADVFL 530
                 + A   + A  Y   M D+   ++
Sbjct: 501 AKSDPARAADVLAGADAYLKLMGDVVGGWM 530


>gi|239983589|ref|ZP_04706113.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 922

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 134/386 (34%), Gaps = 34/386 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N   P +  +    ER D          +++R    G+   +    +  V         
Sbjct: 560 DNEIVPHVRDWDR-AERVDP--------GIVKRLGELGILGLMLPEEYGGVEADMLSYTL 610

Query: 137 AARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                         ++S S+   +  +A   T     +W P++ + E             
Sbjct: 611 VTEELGRGDSSVRGIVSVSLGLVSKTIATHGTDEQKAEWLPRLAAGE------------- 657

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                 LTE   G+D  +++++ ++            +  +  ++D  ++ A+     G 
Sbjct: 658 ALGCFALTEPGTGSDAGSVSTRARRDGGDWVIDGAKIFITNGTVADVALVFART----GE 713

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             +   L      G     +  K+G R  AT EL            LG+     G     
Sbjct: 714 KGLTAFLVPTDSPGFTATEIHGKLGLRGQATAELTLEGVRVPDTARLGEEGRGLGIALGT 773

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +  A  +V   + ++  A+ YA+ R   G  +    +++  +AD  +D+  A  L
Sbjct: 774 LSRGRISVAAGAVGLAQGAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLL 833

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + ++A   D   S  E A      A + KY   + A  V    ++  GG GYI+E  + +
Sbjct: 834 THQVARMADAGASPKEYA----TDASVAKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGK 889

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           + R++   ++  G+     L +   L
Sbjct: 890 YLRDARVLTLYEGTSQVQKLIIGRAL 915


>gi|291303847|ref|YP_003515125.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290573067|gb|ADD46032.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 384

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 82/404 (20%), Positives = 141/404 (34%), Gaps = 40/404 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  L    +E AR      P        G+ +++ EF    + L+ +    G+  + +D 
Sbjct: 9   ETALREAVEEFAR--EKVAPV------AGDLYERGEFP---YKLVAQLGEMGIFGACFDD 57

Query: 123 SFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +            A   L  +    A  + +     A  +    T    + W PK+   
Sbjct: 58  KYGGAGGDYFMLCLALEELGRVDSSLAITVEAAVSLGAMPIYRFGTDEQKQRWLPKLCRG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                  GLTE  GG+D  A  ++     D      G K F+++  +D
Sbjct: 118 E-------------ALAAFGLTEPDGGSDAGATKTRAVLDGDEWVINGG-KCFITNAGTD 163

Query: 242 A--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
              F+ +  V G    G   +  ++      G       +K+G  S+ T EL F +    
Sbjct: 164 ITEFVTVTAVTGTKPDGHKEISTIIVPRDTPGFTVGPKYSKVGWSSSDTRELFFDDCRVP 223

Query: 298 LLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L     G  + ++IL    +  A ++    +  + E+I YA+ RH  G  + D   
Sbjct: 224 AANLLGERGRGYAQFLRILDEGRIAIAALATGLAQGCVDESIRYAKERHAFGHPIGDFQA 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++ AIAD+ L    A    +  A           +       A I K      A      
Sbjct: 284 IQFAIADMELRAHTARLGYYDAAARMRADAPFKRQ-------ASIAKLHASNAAVDNSRA 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 337 ATQIFGGYGFMNETPVARMWRDSKILEIGEGTSEIQRMLIARDL 380


>gi|318061311|ref|ZP_07980032.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318080059|ref|ZP_07987391.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
          Length = 390

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 142/414 (34%), Gaps = 37/414 (8%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P+ + + +E       S     L R             P     ++    P   A  R  
Sbjct: 2   PAGIRRSVERDLPTEESRELIALVRDIAR-----KEIAPHAAAEEESGTFP--RAAFRLL 54

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL    +   +    +  +  ++A      A+L  G  +S  V S   +AL  T   
Sbjct: 55  SDAGLLGLPYAAEYGGGEQPYSVYLQALEELAAARLTVGIGVSVHVLSCHALALHGTKEQ 114

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W                M    +     L+E   G+D AA++++  +          
Sbjct: 115 RAAWL-------------PGMLGGGLLGSYCLSEPTAGSDAAALSTKAVRDGGDWVLSGT 161

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W     +SD   +LA+  G  G   V   L      GL     + K+G + + T +L 
Sbjct: 162 KAWITHGGVSDFCTVLAR-SGGPGAKGVTAYLVPADAPGLSAAPPERKMGLKGSPTAQLH 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHV 344
           F        GD        E     L  LD+  + ++   V LA+A   A       R  
Sbjct: 221 FDGVRV---GDERRIGAEGEGFSLALDALDAGRLGIAACAVGLAQAALDAALDWAAERRQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A  + A  AL    A   D     + +AA A+++       C
Sbjct: 278 FGRAIGDFQGLRFLLADMATAVEAGRALYLAAARRKDAGLPYARQAAMAKLL-------C 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              A  V  +A++  GG GY  +  + R+ RE+    I+ G+     + +   L
Sbjct: 331 TDNAMKVTTDAVQVFGGYGYTSDFPVERYLREAKVLQIVEGTNQVQRMVIGRHL 384


>gi|317406879|gb|EFV86962.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 317

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 117/317 (36%), Positives = 175/317 (55%), Gaps = 13/317 (4%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
              AN   P+L AY   G R D V+FHPAW  L+   +  GLH   W +         A 
Sbjct: 1   GVDANRYPPRLQAYDRTGHRIDHVDFHPAWQLLMSGIVARGLHSRAWAQPV-----PGAQ 55

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKA 189
             RAA   +  Q+EAG L   ++T A++  L   P        DW P ++SRE+D  +  
Sbjct: 56  VARAAAYLMQGQVEAGTLCPTTMTFAAVPLLQREPAGVIDYTGDWLPALYSREFDGADAP 115

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIM 245
              K    IG+GLTEK+GG+D+ A+T++   +        Y L GHKWF S P +DA ++
Sbjct: 116 LAGKRGALIGMGLTEKQGGSDLRAVTTRAAPLGAIGRGCAYSLVGHKWFFSVPQADAHLV 175

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           LAQ +  +GCFLVPR + DG  N +  +RLK+K+GN SNA+ E+EF + +G ++G+    
Sbjct: 176 LAQTDEGLGCFLVPRWIPDGPRNAVRIRRLKDKLGNHSNASAEVEFEDAWGVMVGEPGRG 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              + +M     LD  + S + +R +L +++H+A  R   G  L+ QP+M+  + D+AL+
Sbjct: 236 LAVLLEMAATTRLDCVLGSAALLRQALVQSLHHACHRQAFGKPLLAQPLMRNVLGDLALE 295

Query: 366 IAAATALSFRLANSFDE 382
             AA AL+ RLA + DE
Sbjct: 296 SEAAQALALRLARAVDE 312


>gi|160900259|ref|YP_001565841.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160365843|gb|ABX37456.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 382

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 140/396 (35%), Gaps = 38/396 (9%)

Query: 79  YNTPQLHAYGPGGERWDKVEFHP----------AWHALLRRSIHDGLHCSIWDRSFEPVV 128
           ++TP+L +      R+ + E  P            HA+ RR+   GL C+     +    
Sbjct: 9   WSTPELESLRATAVRFLETEMQPQDEAARQRGNVGHAIWRRAGELGLLCTDIPEDYGGGG 68

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               H+           L      S     A  +    T    + + P            
Sbjct: 69  GDFRHEAVIHEEMARRALSGMS-NSVHSIVAHYLLNHGTEAQKRKYLP------------ 115

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247
             M +  +   + +TE   G+D+  + ++ + + DG Y ++G K F+++ + +   +++ 
Sbjct: 116 -AMARGELVGAIAMTEPGAGSDLQGVRTRAE-LRDGRYRINGSKTFITNGLLAGLILVVC 173

Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDL 302
           + +   G      L+ +     G    R+ +K+G ++  T EL F +        L G  
Sbjct: 174 KTDPAQGARGTSILIVETRDCAGFRVGRVLDKMGMKAQDTSELFFDDVTVPQDALLGGRE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        L   + +++ M  +    + Y R R   G  + D    +  +A++
Sbjct: 234 GQGFYQLMGDLPYERLIIGLTALACMEGAYEATLAYVRERRAFGQAIADMQNTRFKLAEV 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  +    A   R           +  A+ A       K W  +    V+ E ++  GG 
Sbjct: 294 ATTLTVGRAFIDRCVEQLVAGTLDTATASMA-------KLWGSEAQGRVLDELVQLHGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY+ E  + R Y ++    I  G+   M   +   L
Sbjct: 347 GYMNEYMVTRMYADARVQRIYGGTSEIMKEVIARAL 382


>gi|221134571|ref|ZP_03560876.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Glaciecola sp. HTCC2999]
          Length = 589

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/444 (16%), Positives = 154/444 (34%), Gaps = 48/444 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E + +         A++  PQ   +        KV                G   + ++ 
Sbjct: 44  EKIATDVFLPHNAKADHAEPQFDGH--------KVSMLEDVKVAYDAFCDAGFVAARFNF 95

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +      +  ++ A          +  +A+++    +  +   + PK+ + +
Sbjct: 96  EDGGMQLPETIMTGCSGFFMAANPSTTAYPFLTTAAANVIKHFASETLQAQFLPKMLTGQ 155

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
           Y  T             + LTE   G+ +A IT+       G Y + G K ++S    + 
Sbjct: 156 YSGT-------------MALTEPHAGSGLADITTTAYPTEQGHYLIKGSKLYISGGEHEL 202

Query: 242 ----AFIMLAQVEGR-VGCFLVPRLLEDGSP----------NGLCYQRLKNKIGNRSNAT 286
                 ++LA++ G   G   +   +               N +    L +K+G R   +
Sbjct: 203 SENIIHLVLAKIPGGPAGVKGISLFVVPKFRLNNDGQPEQRNDVTLAGLIHKLGYRGTTS 262

Query: 287 VELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L F    +  G+L+G+ +     +  M     +     +          ++ YA+ R 
Sbjct: 263 TALTFGENGDCHGYLVGEPHKGLQYMFMMMNEARVGVGFGAAMIGYRGFQYSLDYAKDRI 322

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMA 397
             G  +++   +KR +         A  L F  A   D+  +  +E      A    ++ 
Sbjct: 323 QGGKPIVEHGDVKRMLLLQKAYTEGAMNLCFYGARLVDDMHTHDDESTRQSSAQLLDLLT 382

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K W  +  P     A++ +GG+GY  E  + + +R++  N I  G+     LD++  
Sbjct: 383 PIIKAWPSEYGPKSNDLAIQVLGGAGYTREYPVEQLWRDNRLNPIHEGTNGIQALDLIGR 442

Query: 457 -LLEKGTNLFEQLFSTLEQDLGSS 479
            L +       +L    + DL  +
Sbjct: 443 KLWQNNQAALGELQRRFQLDLAKA 466


>gi|154252131|ref|YP_001412955.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156081|gb|ABS63298.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 616

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 91/466 (19%), Positives = 167/466 (35%), Gaps = 78/466 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    ++   DG +      +              A + + A       M P +
Sbjct: 72  VRTPPGFKEAFQKYCEDGWNRLGAPEAAGGAGLPSVVTFAFAEMGMSA--NQAFAMYPGL 129

Query: 157 TSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T+A+  AL  T  P + +  A K+ + E+  T             + LTE   GTD+  +
Sbjct: 130 TNAAYSALWATGEPWMREHVAKKMIAGEWTGT-------------MCLTEPHCGTDLKLM 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVGC----------FLVP 259
            ++  +  DG Y ++G K F+S    D       +++A++ G  G           F+VP
Sbjct: 177 KTKAVEQEDGTYRITGTKIFISGGDHDMTDNIIHMVIAKIPGEDGKLANDLSTVNFFMVP 236

Query: 260 RLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------- 304
           ++L +         NG+    ++ K+G + NAT  L F +   + LG             
Sbjct: 237 KMLVNKETGEITGRNGVSCGSIEKKMGIKGNATAVLNFDDAVAYRLGGAPKEKKTETGEV 296

Query: 305 ------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----------- 347
                     +  M     +   I  ++   V+    + YA  R                
Sbjct: 297 KKSKSAGMAGMFGMMNGARMGVGIQGIAIGEVAYQNGVTYANERLAGRSLTGAKNPDGPA 356

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEAAYARIMAPIT 400
             ++  P ++R +      +  A AL+  ++  F       + K R E A  A++M P+ 
Sbjct: 357 DPIMVFPDVRRLLISSRAFVEGARALAMYVSMLFTLQVFGKDEKEREEAADMAQLMTPVI 416

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE- 459
           K +          +AM+  GG GY+ +  + +  R++  N +  G+     LD++     
Sbjct: 417 KAFFTDRGFQAANDAMQVFGGHGYVRDHGMEQFVRDARINQVYEGANGIQALDLVGRKMT 476

Query: 460 -KGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG 499
            KG       F+ LE+ +         K  +  LR       E  G
Sbjct: 477 AKGGRATMTFFAKLEEFIKENENDPEMKPYVEPLRAGYKRLGEAAG 522


>gi|114589063|ref|XP_001139588.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 2 [Pan troglodytes]
 gi|114589065|ref|XP_516734.2| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 7 [Pan troglodytes]
 gi|10434033|dbj|BAB14104.1| unnamed protein product [Homo sapiens]
 gi|119599700|gb|EAW79294.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b [Homo
           sapiens]
 gi|194388598|dbj|BAG60267.1| unnamed protein product [Homo sapiens]
          Length = 498

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 79/413 (19%), Positives = 151/413 (36%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T      + PK+ S E+                  LTE   G+D A+I S+    
Sbjct: 30  IILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDAASIRSRATLS 76

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQR 274
            D   Y L+G K W  +  +++ F + A+      +G V    +   + +    G+   +
Sbjct: 77  EDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVERDFGGVTNGK 135

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSL- 332
            ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   S+  +   L 
Sbjct: 136 PEDKLGIRGSNTCEVHFENTKIPV---ENILGEVGDGFKVAMNILNSGRFSMGSVVAGLL 192

Query: 333 ----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                    YA  R      L +  +++   A +A       ++++  A   D+      
Sbjct: 193 KRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPD- 251

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 I A + K +  + A   ++EA++ +GG GY  +    R  R++    I  G+  
Sbjct: 252 ----CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTNE 307

Query: 449 AMVLDV-LNLLEKGTNLFEQLFSTLEQD-LGSSGKKVITILRDSISLCKEDKGLARFLTE 506
            + + + L  L+    +       L+Q  + +    V   LRDS+    +          
Sbjct: 308 ILRMYIALTGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVDLGLTGNHGVV 367

Query: 507 KIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             +LA SA                 L R G   + +  +  R  +   + + M
Sbjct: 368 HPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINLYGM 420


>gi|166711522|ref|ZP_02242729.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 382

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 150/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEHFDRSGE-------FPL--ENIRLLGENGLMGIEVPVDYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   +L     V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  +  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 227 GVEGEGFRTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + ++   EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWLKGQGQTFGTEAAVAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|241662479|ref|YP_002980839.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864506|gb|ACS62167.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 594

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/448 (19%), Positives = 178/448 (39%), Gaps = 57/448 (12%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +     +    G         +      +   I  A + ++        + P +T  ++
Sbjct: 76  GFKEAFAQFGQGGWQGVQHPLEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAI 133

Query: 162 VALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            AL+T  +    + + PK+ S E+  T             + LTE + G+D+A + ++ +
Sbjct: 134 EALLTAGSEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAE 180

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
            + DG + + G K F++    D       ++LA+  G       +  F+VP+ + +    
Sbjct: 181 PVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVVPKFMVNPDGS 240

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G+ N      +++K+G +++ T  L+F +     G L+G+ N     +  M        
Sbjct: 241 LGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRGLEYMFIMMNAARYAV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATA 371
            +  +     +  +A+ YAR R  S            +I  P +KR +  +      A A
Sbjct: 301 GMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARA 360

Query: 372 LSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++  A + D          R + AA    + PI K W  +M+  V +  ++  GG G+I
Sbjct: 361 LAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSIDVTSMGVQVHGGMGFI 420

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQ---DLGSSG 480
           EE   A+ YR++    I  G+      D++    +  G  +   + + + +    L + G
Sbjct: 421 EETGAAQFYRDARILPIYEGTTAIQANDLIGRKTVRDGGAVALGICAEIAKVEVALAAKG 480

Query: 481 KKVITILRDSISLCKED-KGLARFLTEK 507
                 +R  ++  +E  + + RF+  +
Sbjct: 481 GAHCDAMRARLAAGREALESVVRFVVAQ 508


>gi|94498439|ref|ZP_01304996.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94422087|gb|EAT07131.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 581

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 201/563 (35%), Gaps = 68/563 (12%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
            P            LL  ++           E+  +   S   +E  R+    + +L+  
Sbjct: 5   VPPIEDYRF-----LLNEVLGFDAQTSELGFEVDADLAAS-VLEEAGRLC---SDRLYPL 55

Query: 88  GPGGERWDK------VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
              G+          V   P +    R     G      D ++         ++    + 
Sbjct: 56  NREGDEKGSQLVDGVVRTPPGFADAYRDFASAGWASLSADPAYGGQGLPFILQLWLDEMM 115

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L  G     +  +   +A     ++   + P++ S E+                + 
Sbjct: 116 SAANLSFGLFPGLTRGACEAIAAHADDQLKTAYLPRMISGEW-------------TGVMA 162

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251
           LTE   GTD+A + ++   + DG Y ++G K F+SS   D       ++LA++       
Sbjct: 163 LTESGAGTDLALLKTRAAPLDDG-YAITGTKIFISSGDHDFGGNIVHLVLARLPDAPAGV 221

Query: 252 -RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
             +  FLVP+ L D S      N L    L+ K+G  +  T  + +    G+L+G+ +  
Sbjct: 222 KGISLFLVPKFLPDESGGFTARNTLSVGALEKKMGIHAQPTCVMNYDGATGWLVGEPHRG 281

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI----LIDQPVMKR 357
              +  M     L   I  +     +  +A  YA+ R       G      +ID   ++R
Sbjct: 282 LAAMFTMMNTERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSADGKAGPVAIIDHADVRR 341

Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411
            +  +   + A  AL+   A   D A++      R+   A   ++ P+ K     +    
Sbjct: 342 MLLGVRAFVEAGRALAGWTALQLDRAQAHPDPSERARADARVALLTPVIKAAFTDLGFEG 401

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
             +A +  GG GYI E  + +  R++    I  G+     +D++   L   G  + E+ F
Sbjct: 402 AVQAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVGRKLGMGGGTVVEEFF 461

Query: 470 STLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
           + ++ DL S  +       +   R +++L +      R        A++   L    +  
Sbjct: 462 ALIDADLDSLAEAAVNHSVVAQTRQALALLRTSTVALRGADADATGAAAVDYLRLFAL-- 519

Query: 525 IADVFLENRFLDNCHSTHCMLHG 547
           +A  ++ +R +      +  LH 
Sbjct: 520 VAMGWMWSRMVGAAIKGNSPLHA 542


>gi|84687018|ref|ZP_01014901.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664992|gb|EAQ11473.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Rhodobacterales bacterium HTCC2654]
          Length = 385

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 123/358 (34%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +R+  +G  C   D  +  +  +           +  +     L   +  +   + 
Sbjct: 41  REIWKRAGEEGFLCMYADEKYGGLGLEDFRYDMILIEEIGTREAGFFLGLHNRIAGPYMQ 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + P I S                 + + +TE   G+D+A I ++  ++ D
Sbjct: 101 HYANDEQRDRYMPGIVSG-------------DTILAIAMTEPGTGSDLAGIKTRAVEMDD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +  ++   I+ A+         V   L +    G    R   K+G  S
Sbjct: 148 HWVLNGSKTYISNGFLAGLVIVAAKTNPDASHE-VGLFLVEDGMEGFSRGRNLKKMGLES 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F +        L    G  + M +      L+ A+  V+    +    + +  
Sbjct: 207 QDTAELFFDDVKVPKANVLGDPKGGFKTMMLNLAEERLNGAVGFVARAERAFEITMEFIM 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +      +  +A +  +I AA AL         + +  +E       MA   
Sbjct: 267 DRRAFGKPIGTFQNSRFKMASMRTEIDAAQALVDHCVREHLKGELSAE-------MASEA 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  ++   V+ E ++  GG+GY+EE  I+R YR++  + I  G+   M   +   L
Sbjct: 320 KLFTSEVEGRVVDECVQLHGGAGYMEEYEISRLYRDARISRIYAGTSEIMREIIGRGL 377


>gi|196014217|ref|XP_002116968.1| hypothetical protein TRIADDRAFT_31810 [Trichoplax adhaerens]
 gi|190580459|gb|EDV20542.1| hypothetical protein TRIADDRAFT_31810 [Trichoplax adhaerens]
          Length = 604

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/489 (19%), Positives = 180/489 (36%), Gaps = 58/489 (11%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P     D+     +  AL       G       + +  +  K     R A +     L
Sbjct: 67  HDPSQCDLDEKLPDKSLQALKEL----GGFGIQAPQEYGGMQLKNTQYARLAEIVGSFDL 122

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                M+         + L    +  + + P + + E                   LTE 
Sbjct: 123 SIAVFMAGHQAIGYKGIVLFGNEQQKQKYLPSLTTGE-------------KIAAFCLTEP 169

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV-----EGRVGCFLV 258
             G+D  +I S      DG  Y L+G+K ++S+  ++D   + AQV     +       V
Sbjct: 170 SAGSDANSIRSTAVLDEDGKHYILNGNKIWISNGGIADVMTVFAQVPFKKDDSDKQSQAV 229

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              + +    G+     + K+G RS+ T  + F N    +    NV     E  K+ +  
Sbjct: 230 TAFIVERDFGGVTSGLPEKKMGIRSSNTAAVYFDNVKIPV---ENVIGKVGEGFKVAMNI 286

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+    ++      +        I +A+ R   G  LI+   ++  IA + L   A  ++
Sbjct: 287 LNEGRFAMGAAMSGVIRMLVTKTIEHAKNRVQFGQHLIEYQSIQEKIAQMGLTHYAVESV 346

Query: 373 SFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++ ++N+ D   K    EAA       I+K    + A  V  E ++ + G G++ E  + 
Sbjct: 347 AYAVSNNMDRGIKEFQVEAA-------ISKVLSSESAWNVCDECIQILAGMGFMRENQVE 399

Query: 432 RHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ---DLGSSGKKVITIL 487
           R  R+     I  G+ + + L + LN ++      ++L   L+Q   +LG+   + +   
Sbjct: 400 RFMRDVRIYRIFEGANDTLRLFIALNGIQYAGKNMKELQKALQQPISNLGTLWNQGVKRS 459

Query: 488 RDSISLCKEDKGL----------ARFLTEKIALASSAAA--LYRAGMNDIADVFLENRFL 535
           +  I +    + L          A+ +T+++    +     L + G N I   F+ NR  
Sbjct: 460 KRLIGIADSQELLEVTAPELSDCAKMITQRVEEFGATIERILLKHGRNIIDQQFILNRIA 519

Query: 536 DNCHSTHCM 544
           +     + M
Sbjct: 520 NATIDIYSM 528


>gi|326386151|ref|ZP_08207775.1| long-chain acyl-CoA dehydrogenase [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326209376|gb|EGD60169.1| long-chain acyl-CoA dehydrogenase [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 384

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 130/375 (34%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G +W +    P   ++  ++   G+ C      +  +     +              A
Sbjct: 32  PNGAKWAEDGIVP--KSVWPKAGALGMLCPTVPEEYGGLGLDFGYNAIVDEESAYNGRVA 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S    + +    +    + W PK+ S E             V   + +TE   G
Sbjct: 90  TGFSLQSDIVVNYLVSYGSEEQKRTWLPKLVSGE-------------VVTAIAMTEPGTG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+  + +  +K  +         +  +   +D  ++  + +  +      V  LL + +
Sbjct: 137 SDLQGMRTTAKKDGNHYVLNGSKTYITNGQNADLILVCCKTDTAIEPAWKGVSILLVEAT 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             G    R  +KIG     T EL F +    +   L     G +  M  L    L  A+ 
Sbjct: 197 REGFRRGRNLDKIGQDEADTSELFFDDVRVPITNCLGEEGKGFIYLMSELPQERLSIAVS 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +  + +  + + + R R   G  ++D    +  +AD+   +    A            
Sbjct: 257 AQASAQRAFDDTVAFTRERKAFGKPILDFQNTRFTLADLKTKLQVGWAHLDWALARHLRK 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   EE A A       K W  ++   V+ + ++  GG+GY+ E +IAR +R +    I 
Sbjct: 317 ELTPEEGAAA-------KLWHTELQWEVMDKCLQLHGGAGYMNEYAIARAWRGARVTRIF 369

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 370 GGTNEIMKELIGRKL 384


>gi|159037973|ref|YP_001537226.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157916808|gb|ABV98235.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 381

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/398 (21%), Positives = 151/398 (37%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +  AQ+L  +A     +  A    G   ++ EF      +LR     GL    +   +  
Sbjct: 9   TDEAQDLLDLATEIADRELAPKAAGHE-ERAEFP---REVLRTLGRAGLLGLPYGEEYGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +     ++   +     L     +S    S   +A   TP+  K   P +   E    
Sbjct: 65  AAQPYEVYLQVLEILASRWLAVAEAVSVHTLSCYPLAEYGTPQQRKRLLPDLIGGEQ--- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                          L+E +GG+D A +T++  +  DG        W   + ++D F + 
Sbjct: 122 ----------LGAYCLSEPQGGSDAAGLTTRAARDGDGYVVSGTKAWITHAHVADFFNIF 171

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  G  G   +  LL D S  G+  Q  +  +G  ++   ++ F  T       +    
Sbjct: 172 CRT-GGAGARGISCLLADRSMPGIQPQVAERTMGLHASPVAQIAFDETRVPADRLIGGEG 230

Query: 307 GPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                    +    L  A  +V   + +L  A+ YAR R   G  ++D   +   +AD A
Sbjct: 231 EGFGIAMSALDSGRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDFQGLGFMLADAA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I+AA AL    A   D  +  S EAA A       K +   +A  V  +A++ +GG+G
Sbjct: 291 TQISAARALMLTAARLRDAGRPYSIEAAKA-------KLFATDVAMRVTIDAVQVLGGAG 343

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y+ +  + R+ RE+    I+ G+     + +   L KG
Sbjct: 344 YVADHPVERYMREAKVLQIVEGTNQIQRVVISRALAKG 381


>gi|219670532|ref|YP_002460967.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219540792|gb|ACL22531.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 591

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 172/465 (36%), Gaps = 47/465 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              + ++   GL           +   +   +            A   M+ +      + 
Sbjct: 63  RDFMAQAGELGLLGLEVPEELGGMSMDKFSTVVVGEEIPRGASFAVAFMAHTGIGTLPIV 122

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP     + P + + E                   LTE   G+D     +     ++
Sbjct: 123 YFGTPEQKAKYLPGLATGE-------------KIAAYCLTEPGSGSDALGAKATAVLNAE 169

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++   +D F++ A+VEG++  F+V R     +  GL +   + K+G 
Sbjct: 170 GTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVER-----TMPGLSFGPEEKKMGI 224

Query: 282 RSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           + ++T ++   +    +   +G+L        ++  +     A  ++   +++L   + Y
Sbjct: 225 KGSSTRQVILEDVAVPVENIVGELGRGHVVAFNILNVGRFKLAAAAIGSAQLALEVTLKY 284

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-------KSRSEEAA 391
           A  R   G  L     ++   A+IA     A ++ +R A   +EA           +EA 
Sbjct: 285 AAERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVYRTAGLMEEACQDLDVTGDCRKEAG 344

Query: 392 YAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            A     I   + K    ++    + E ++  GG G+I E  I R YR+S  N +  G+ 
Sbjct: 345 KAIEEYAIECSLNKVLASEVLDLAVDEGVQIHGGYGFIAEYPIERMYRDSRINRLFEGTN 404

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL--- 504
               L V   L K       +   L   L ++ K V   L  S  L  E++GLA  L   
Sbjct: 405 EINRLLVPGTLLK-----RAMSGEL--PLLAAAKNVSKDL-MSAGLGSEEEGLAALLNMT 456

Query: 505 --TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              +K+ L ++  A    GM    + ++     +     + M  G
Sbjct: 457 QKAKKLCLMAAGIAAQNLGMELKDNQYVLLGLAEMVLQVYAMESG 501


>gi|330464927|ref|YP_004402670.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328807898|gb|AEB42070.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 382

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 127/370 (34%), Gaps = 29/370 (7%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSP 154
           +    P  + ++R+    GL    +   +  +         A           A  L + 
Sbjct: 33  EQHTFP--YEVIRQMGKMGLFGLPFAEQYGGMGGDYFALCLALEELARVDSSVAITLEAA 90

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A  +    T      W PK+ S E                G GLTE   G+D    
Sbjct: 91  VSLGAMPIYRFGTEEQKARWLPKLLSGE-------------ALAGFGLTEPGTGSDAGGT 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLC 271
            ++     D         +  +S   ++    + A    R  G   +  ++      G  
Sbjct: 138 ETRAVLDGDEWVINGSKAFITNSGTDITALVTVTAVTGTRPDGAKELSTIIVPSGTPGFT 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
                +K+G  ++ T EL F +        L     G  + ++IL    +  A ++V   
Sbjct: 198 VAPGYSKVGWTASDTHELTFDDCRVPAENLLGERGRGFAQFLRILDEGRIAIAALAVGLA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  + E+I YAR RH  G  + +   ++  +AD+ +    A    +  A      +    
Sbjct: 258 QGCVDESIKYARERHAFGQPIGNYQAIQFKVADMEMKAHTARLAYYDAAARMLAGEPFKR 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA A++ A         +A     EA +  GG G++ E  +AR +R+S    I  G+  
Sbjct: 318 QAAIAKLHAST-------IAVDNAREATQIHGGYGFMNEYPVARFWRDSKILEIGEGTSE 370

Query: 449 AMVLDVLNLL 458
              + +   L
Sbjct: 371 VQRMIIARDL 380


>gi|309812263|ref|ZP_07706018.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433568|gb|EFP57445.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 384

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 80/370 (21%), Positives = 144/370 (38%), Gaps = 28/370 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D V     W    ++    GL C   +     +   + + I A  +       A      
Sbjct: 35  DHVIARDIWLEAGKQGF-FGL-CIPEEYGGAGIDDYRFNAIFAEEISKFTAAVASCFGIH 92

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +A  +  + T    + + P++ + E             + + +G+TE  GG+D+A +
Sbjct: 93  SDVTAPYIVSLGTEEQKQKYLPRVATGE-------------LILSIGMTEPSGGSDLANL 139

Query: 215 TSQGQKISDGI--YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            S   K  DG   + L+G K F+++    D  ++ A+ +   G   +   L +    G  
Sbjct: 140 KSTAVKADDGSGDWILNGSKTFITNGHQCDVAVVAARTDPSKGAKGISLFLVEAGTEGFT 199

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
                +K+G   + T EL F N        L     G +  MK L    + +AI +++  
Sbjct: 200 KGNKLDKVGQVESDTSELFFDNVRLPADALLGPQDLGFIAMMKHLPQERIGNAIANIANA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +  LAE I Y + R   G  +         IA++   I  + A       +  E K  + 
Sbjct: 260 KQILAETIQYCKDRKAFGQPIGSFQHNTFKIAEMVTKIEVSEAYIDDCVAAHAEGKLTAV 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA A+  A   +         V+ E ++  GG GY+ E  +AR +R++  + I  GS  
Sbjct: 320 DAAKAKWWAAQVQC-------DVLDECVQLHGGYGYMNEYRVARAWRDARVHKIWAGSNE 372

Query: 449 AMVLDVLNLL 458
            M + +   L
Sbjct: 373 IMKMIIGRDL 382


>gi|301773964|ref|XP_002922405.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 441

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 124/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + +H  W         L  ++   GL           V                +     
Sbjct: 84  IPYHAEWEKAGEVSRDLWEKAGKQGLLGVNIAERHGGVGGDLYSTAITWEEQAYSNCSGP 143

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    K + P++ S +                 L +TE   G+
Sbjct: 144 GFSLHSDIVMPYIVNYGSEEQIKRFIPQMTSGKC-------------IGALAMTEPGAGS 190

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+++   SD  I++A    E       +   L +  
Sbjct: 191 DVQGIRTNAKKDGSD-WILNGSKVFITNGWLSDVLIVVAVTNHEAHSPAHGISLFLVESG 249

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    +   K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 250 MKGFIKGQKLQKMGLKTQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADL 309

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y + R   G  +     ++  +A++   I    A         D  
Sbjct: 310 AISASEFMFEETRNYVKERKAFGKTIAHMQTVRHKLAELKTQICVTRAFV-------DSC 362

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E+       A + KYW  ++   V  + ++  GG GY+ E  IA+ Y ++ A  I 
Sbjct: 363 LQLHEKKRLDSATASMAKYWASELQNRVAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIY 422

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 423 GGTNEIMKELIARDI 437


>gi|89072818|ref|ZP_01159375.1| putative acyl-CoA dehydrogenase [Photobacterium sp. SKA34]
 gi|89051340|gb|EAR56795.1| putative acyl-CoA dehydrogenase [Photobacterium sp. SKA34]
          Length = 386

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 138/401 (34%), Gaps = 35/401 (8%)

Query: 67  SCTAQELARMAN-----YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           S    +L   AN      N        P     D+    P +  L +     GL      
Sbjct: 6   SPLNFDLGDTANMLREQVNLYAAEHIAPIANEIDQDNQFPHY--LWQSLGQMGLLGVTIA 63

Query: 122 RSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +    +    H I    +   +        + S   A+ +         K + P + +
Sbjct: 64  EQYGGANMGYLEHVIVMEEISRASASIGLSYGAHSNLCANQIFRNGNDAQRKQYLPALIT 123

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+                L ++E   G+D+ ++  + +   D         W  + P +
Sbjct: 124 GEH-------------IGALAMSEVNAGSDVMSMQLKAEDHGDHFVLNGNKMWITNGPEA 170

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           +  ++ A+         +   + +   +G    +  NK+G R + T EL F N       
Sbjct: 171 NTLVVYART----SVNAITAFIIESQFDGFSTAQKLNKLGMRGSNTCELVFINCIVPKKN 226

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LGD++     +        +  A   +   +  L   I Y   R   G  + +  +++ 
Sbjct: 227 VLGDVDHGAKVLMSGLDFERVVLAAGPLGIAQSCLDVVIPYIHERKQFGKAIGEFELIQA 286

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+   + AA +  + +A + D  +   ++AA   ++         ++A  +  E ++
Sbjct: 287 KIADMYTQLNAARSYVYTVAKACDRGEVTRKDAAGVILL-------SAELATKMALETIQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG+GYI +    R  R++    I  G+     + +   L
Sbjct: 340 ILGGNGYINDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 380


>gi|115378539|ref|ZP_01465695.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822382|ref|YP_003954740.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115364461|gb|EAU63540.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395454|gb|ADO72913.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 379

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 135/368 (36%), Gaps = 28/368 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P    WD+    P    + +++   G      D  +                   +Q  
Sbjct: 25  TPHALEWDREGIFP--REIFKQAGDLGFLGINHDPKYGGSGLDYWFVTAFCEELSRSQNA 82

Query: 148 --AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L+     +  ++  + T    +++               P  K      LG++E 
Sbjct: 83  GVNMALLVQGQMATPIINEIGTDEQKREFLE-------------PALKGEKIAALGVSEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A + +  +   D  Y ++G K ++++     FI L    G  G   +  +    
Sbjct: 130 GVGSDVANMKTTARIDGDD-YVINGSKMWITNGTRADFITLGVRTGEAGYGGISLVTFPT 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+GN S+ T  L F +      ++LG  N     +        L +A+
Sbjct: 189 DVKGFSVSKKLDKVGNLSSDTAILFFEDCRIPRRYVLGAENEGFYSIMTNFQGERLVTAL 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+GM   + +A+ Y   R   G  L+   V +    +    I AA  L++     FD+
Sbjct: 249 TAVAGMERMVEDALRYGTEREAFGKPLLKFQVWRHKFVEHLTAIEAAKRLTYHAVAVFDQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +E         + K +   +A  V  +  +  GG GYIEE  IAR +R+    +I
Sbjct: 309 KENAVKE-------ISMAKLFAGDLAQRVAYDCQQFFGGMGYIEETPIARAWRDIRLITI 361

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 362 GGGTSEVM 369


>gi|254436626|ref|ZP_05050120.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252072|gb|EDY76386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 566

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/468 (18%), Positives = 171/468 (36%), Gaps = 44/468 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +       L ++ + +   L      G     V   P +    +   + G        
Sbjct: 45  AKLSDEVLAPLQKLGDQHPAVLE----NGV----VRTSPGFGDGFKAIANGGWIGISAST 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +            +   A L               +    +  +   + PK+ S E
Sbjct: 97  ENGGMGLPLTLATTVNDMMAGACLSLQLNPLMCQGQIEALEHHASDAIKDLYLPKLISGE 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE + G+D+ A+ S      DG Y +SG K ++S   +D 
Sbjct: 157 WAGT-------------MNLTEPQAGSDVGALRSTAVPNDDGSYAISGQKIYISWADNDF 203

Query: 243 -----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++         +  F+VP+ + D     G  N L    L++K+G   + T
Sbjct: 204 TENVCHLVLARLPDGVAGTKGISLFMVPKRIPDADGNLGERNDLRVISLEHKMGLHGSPT 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +E++   G+L+G+ +     +  M     L  A   +     +   A+ YA  R    
Sbjct: 264 AVMEYAGAKGWLVGEKHAGMAAMFTMMNNARLGVATQGIGVAEAAYQHALAYAMDRKQGK 323

Query: 347 ----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--AYARIMAPIT 400
               G + +   ++R +A +  DI AA A+S   A + D A +  + A  A A ++ PI+
Sbjct: 324 AGGTGTIAEHADVRRMLASMKADIFAARAISLANAVAIDMANATGDGAWTARAALLTPIS 383

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLLE 459
           K +   +   + +  ++  GG G+IEE   A++ R+    +I  G+     +D V   + 
Sbjct: 384 KAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMDLVARKMM 443

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
            G +    L   +E    ++   +  +        +  +    +L  +
Sbjct: 444 DGGDAAFALLDEIEAAADAAKATMPDLAEPVWQAAETLRETTEWLATQ 491


>gi|169628951|ref|YP_001702600.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240918|emb|CAM61946.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 386

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 127/377 (33%), Gaps = 29/377 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  ERW     H        +    GL        +                  +AQ  
Sbjct: 33  TPNQERWSAQ--HQVDREFWNKMGDAGLLGLDLPEEYGGAGGDFGFSAVVGEELALAQDT 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +      S   A  +           W P I S               + + + +TE   
Sbjct: 91  STGWAVHSPIVAHYINTYGNEEQRARWMPGIISG-------------DLVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDG 265
           G+D+ A+ +      D  Y ++G K F+S+    D  +++A+ +   G   V  ++ E  
Sbjct: 138 GSDLQAVRTTAIPDGDH-YVINGSKTFISNGTHCDLLVIVAKTDPSQGAAGVSLIVAETK 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL----NVSTGPVEDMKILIYLDSA 321
              G    R+  K+G     T EL F++    +   L     +    + +      L  A
Sbjct: 197 DLPGFERGRVLEKVGQHGQDTRELFFTDMRVPIANRLGDKDGLGFYQLMEQLARERLIIA 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +       +L EAI Y + R   G  LI     K  +A++  ++ +           + 
Sbjct: 257 AVCSGMAEGALIEAIKYTKEREAFGKPLIKFQNTKFQLAELKAEVLSIKTTVDYCVQDYI 316

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +    A+ A+++A          A +V+   ++  GG GY+ E  IAR Y  +  N 
Sbjct: 317 NGNNDPATASMAKLIAA-------DKAVSVVDRCVQFFGGYGYMMEYPIARAYAAARVNK 369

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 370 IYGGTSEIMKEIISRSL 386


>gi|126651018|ref|ZP_01723229.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
 gi|126592219|gb|EAZ86268.1| acyl-CoA dehydrogenase [Bacillus sp. B14905]
          Length = 397

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/387 (19%), Positives = 132/387 (34%), Gaps = 40/387 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD      A   +  R    GL        +        +   A     + + + 
Sbjct: 26  PYIAKWDAEGGFDA--KIWSRLAELGLMGVCVPEQYGGSGMD--YNSLAIVCEELERGDT 81

Query: 149 GHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + SV +      +    T    + +               P  K       GLTE 
Sbjct: 82  AFRTAVSVHTGLNSMTLMQWGTEDQKQRYLI-------------PQAKGVRIGAFGLTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+AA+++   +  D         W     ++D FI+ A  +       +   + + 
Sbjct: 129 GAGSDVAAMSTTAVRDGDHYVINGQKTWISLCDIADHFIIFAYTDKSKRHHGISAFIVER 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
           S  G   + +K K G R+  T EL F +    +   L V     E  KI +  LD+   +
Sbjct: 189 SMAGFTSKAIKGKYGIRAGNTGELFFEDLRVPVENRLGVEG---EGFKIAMSALDNGRFT 245

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   V L +A       Y   R   G  + +  ++ + IA++      +  L +R+   
Sbjct: 246 VAAGAVGLIQACLEASVKYCHERETFGKPIGEHQLVGQMIANMEAGYQMSRLLVYRVGEL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++    + E + A+  A       C  A     +A++  G  GY +E  +AR+ R S A
Sbjct: 306 KNKGVRNTRETSLAKWQA-------CDFANKAADDAVQIHGAYGYSDEYPVARYLRNSKA 358

Query: 440 NSILLGSGNA----MVLDVLNLLEKGT 462
             I  G+           VL   +   
Sbjct: 359 PVIYEGTREIHTIMQADYVLGRRQDKP 385


>gi|313803279|gb|EFS44475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA2]
 gi|313839189|gb|EFS76903.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL086PA1]
 gi|314964053|gb|EFT08153.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA1]
 gi|327334391|gb|EGE76102.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL097PA1]
          Length = 382

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFILNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|285017877|ref|YP_003375588.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73]
 gi|283473095|emb|CBA15600.1| hypothetical acyl-coa dehydrogenase protein [Xanthomonas
           albilineans]
          Length = 594

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 87/523 (16%), Positives = 168/523 (32%), Gaps = 61/523 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
               +     D L V  +                 ++    +E AR        L+    
Sbjct: 7   PLNDLRFALYDVLQVEALFARLGHAETN-----AELIDAVLEEAARFTGTVLAPLNRIGD 61

Query: 89  PGGERWDK----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             G   DK    V   P +    R+    G        +F               +   A
Sbjct: 62  EHGCTLDKSTGTVTTAPGFRDAYRQFAEGGWTGLTAPVAFGGQGLPYTLSAPLNEMVNAA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L  G+    S  +   +         + +   +    +  T             + LTE
Sbjct: 122 NLAWGNFPLLSHGAVEALKQHGEAWQQEIFLKPLVDGRWTGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLV 258
              GTD+  + ++ +  +DG + +SG K F+++   D       ++LA+  +   G   +
Sbjct: 169 PHCGTDLGLLKTRAEPNADGTWSVSGTKIFITAGEHDLTENIVHLVLARLPDAPPGAKGI 228

Query: 259 PRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
             L+            G  N L    L++K+G   +AT  + F    G+L+G  +     
Sbjct: 229 SLLVVPKYRVARDGRLGERNALRCGALEHKMGIHGSATCVMNFDGAQGYLIGPPHKGLQA 288

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMK 356
           +  M     L   +  +     +   A+ YAR R  S               ++  P ++
Sbjct: 289 MFTMMNTARLGVGLQGLGLSERAYQNALRYARERLQSRSLSGAKQPEKPADPILVHPDVR 348

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPA 410
           R +  +      +  L+   A+  D A S ++ A           + PI+K    + A  
Sbjct: 349 RMLLTVKALTEGSRLLALHAASLIDIAHSATDPAEREQADVLVSFLTPISKACQTEWAVE 408

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQL 468
               A++C GG GYI E  + +  R++   ++  G+     LD++               
Sbjct: 409 TTYHALQCFGGHGYIHEYGMEQLARDARITTLYEGTTGIQALDLIGRKTASSQGAGLTLF 468

Query: 469 FSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIA 509
            + +E  L        +   +       KE   L + + ++ A
Sbjct: 469 LAQIEAFLAEHHDTPALAEFIAPLREKAKEWAALTKRILQRAA 511


>gi|160897834|ref|YP_001563416.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363418|gb|ABX35031.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 596

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/461 (18%), Positives = 174/461 (37%), Gaps = 56/461 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSI 111
               E  G        +E A++       L+      P   +   V     +    R+  
Sbjct: 26  LPGFEEAGLETAQAVLEECAKLCEGVVAPLNLPGDVAPSSLKDGVVTTTAGFKQAFRQYA 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G       + F      +   I AA + ++        + P +T  ++ AL+T  +  
Sbjct: 86  EGGWQGLQHPQDFGGQGLPK--TIGAACVEMLNSANLSFALCPLLTDGAIEALLTAGSDE 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +   +  K+ + E+  T             + LTE + G+D+A + ++     DG Y + 
Sbjct: 144 LKATYLEKLVTGEWTGT-------------MNLTEPQAGSDLALVRTKADPQPDGSYKVF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQ 273
           G K F++    D       ++LA+V G       +  F+VP+ L +        N +   
Sbjct: 191 GTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVVPKFLVNKDGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L++ +     G+L+G+ N     +  M         +  ++    
Sbjct: 251 SIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRGLEYMFIMMNAARYAVGVQGIAVAER 310

Query: 331 SLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRL----- 376
           S   A+ YAR R  S            +I  P ++R +  +        A++        
Sbjct: 311 SYQHAVAYARERVQSRPVDGSVKASATIIHHPDVRRMLMTMRAYTEGCRAMAATAAAAYD 370

Query: 377 -ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            ++   +A+ R   AA+   M P+ K +  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 371 ASHHHADAQVREANAAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ 474
           ++   +I  G+       L        G      +   +E+
Sbjct: 431 DAKILTIYEGTTAIQANDLVGRKTARDGGQTALAIAGQIEK 471


>gi|291451438|ref|ZP_06590828.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291354387|gb|EFE81289.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 389

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 79/411 (19%), Positives = 146/411 (35%), Gaps = 35/411 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 2   DHRLSAEHEELRRTVEAF-----AHDVIAPKIGDLYERHEFPYEIVREMGRMGLFGLPFP 56

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    ++W P++ +
Sbjct: 57  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPIHLFGTEEQKREWLPRLCA 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E             +    GLTE   G+D     +  +       + ++G K F+++  
Sbjct: 117 GE-------------ILGAFGLTEPGAGSDAGGTRTTARLDEATDEWVINGGKCFITNSG 163

Query: 240 SD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G  L+  ++      G       +K+G  ++ T EL F    
Sbjct: 164 TDITGLVTVTAVTGRKPDGSPLISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFDEVR 223

Query: 296 GFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G  + ++IL    +  A +     +  + E++ YA  RH  G  +   
Sbjct: 224 VPAANLLGEQGRGYAQFLRILDEGRIAIAALGTGLAQGCVDESVKYAAERHAFGKPIGAN 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  IAD+      A       A+     +   ++AA A       K     +A    
Sbjct: 284 QAIQFKIADMDTRAYTARLAWRDAASRLVAGEPFKKQAAAA-------KLHSSTVAVDNA 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            +A +  GG G++ E  +AR +R+S    I  G+     + +   L  G  
Sbjct: 337 RDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIARELGVGGG 387


>gi|171057535|ref|YP_001789884.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170774980|gb|ACB33119.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 131/354 (37%), Gaps = 20/354 (5%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +  +    A +   A  L   A      + +     +  + +  T   
Sbjct: 46  ELGLFGISIPEEYGGIGLSMAQECEVAYELGQTALAFRSVVGTNIGIGSQGILMDGTAAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P+I S               + +   LTE   G+D  A+ ++G    D       
Sbjct: 106 KETYLPRIASG-------------DLIVSFALTEPDAGSDAGALKTRGVIDGDDYLLDGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++  + AF ++A+ +G  G   +   +      GL   +   K+G R   T ++ 
Sbjct: 153 KRYITNATRAGAFTLMARTDG-PGTAGISAFIVPADAAGLSLGKPDKKMGQRGTKTCDVN 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             N        +      G    MK+L    L  + ++    +  L E+I YA++R   G
Sbjct: 212 LDNVRVPAANIIGGVPGRGFKTAMKVLDRGRLHVSALACGMAQRILQESIAYAQQRRQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D  +++  +AD   ++ A  A+    A  +DE  +   +     + A  TK +  +
Sbjct: 272 QRIGDFQLIQAMLADSQAELLAGWAMVQATARRYDERAAGRTDPD-VGMQASCTKLFTTE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           M   V    ++  GG+GYI E  + R YR+     +  G+     L +   L +
Sbjct: 331 MVGRVADRGVQIHGGAGYINEYKVERFYRDVRLLRLYEGTSQIQQLIIGKHLMR 384


>gi|169826446|ref|YP_001696604.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
 gi|168990934|gb|ACA38474.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41]
          Length = 393

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 125/378 (33%), Gaps = 36/378 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +WD      A   +  R    GL        +                           +
Sbjct: 26  KWDAEGGFDA--KIWSRLAELGLMGVCVPEQYGGSGMDYNSLAIVCEELERGDTAFRTAV 83

Query: 153 SPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S  +  ++  +    T    + +               P  K       GLTE   G+D+
Sbjct: 84  SVHIGLNSMTLMQWGTEDQKQRYL-------------VPQAKGVRIGAFGLTEPGAGSDV 130

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+++   +  D         W     ++D FI+ A  +       +   + + S  G  
Sbjct: 131 AAMSTTAVRDGDHYVINGQKTWISLCDIADHFIVFAYTDKSKKHHGISAFIVERSMAGFT 190

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRV 330
            + +K K G R+  T EL F +         N      E  KI +  LD+   +V+   V
Sbjct: 191 SKAIKGKYGIRAGNTGELFFEDLRVPA---ENRLGEEGEGFKIAMSALDNGRFTVAAGAV 247

Query: 331 SLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            L +A       Y   R   G  + +  ++ + +A++      +  L +R+    ++   
Sbjct: 248 GLIQACLEASVKYCHERETFGKPIGEHQLVGQMLANMDAGYQMSRLLVYRVGELKNKGVR 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E + A+  A       C  A     +A++  G  GY +E  +AR+ R S A  I  G
Sbjct: 308 NTRETSLAKWQA-------CDFANKAADDAVQIHGAYGYSDEYPVARYLRNSKAPVIYEG 360

Query: 446 SGNA----MVLDVLNLLE 459
           +           VL   +
Sbjct: 361 TREIHTIMQADYVLGRRQ 378


>gi|115733016|ref|XP_782503.2| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain
           [Strongylocentrotus purpuratus]
 gi|115950405|ref|XP_001189622.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain
           [Strongylocentrotus purpuratus]
          Length = 443

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 117/359 (32%), Gaps = 27/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL       S   +                           S      ++
Sbjct: 100 KELWEAMGSAGLLGVDIPESQGGIGGDLLMTSIVWEEQAYVNSAGTAFPMHSDIVMPYIS 159

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   + + P              M   +    L +TE   G+D+  I +  +K  D
Sbjct: 160 HYGTPEQIEKFIP-------------AMTAGTKVGALAMTEPAAGSDLQGIKTSAKKDGD 206

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y L+G K F+++   SD  +++A  +   +     +   L +    G    +   K+G
Sbjct: 207 D-YILNGSKVFITNGCLSDVVVVVAITDLNAKKKAHGISLFLVEAGMPGFTKGKPLEKVG 265

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +S  T EL F +       LLG  N     + +      L   +   +       E  +
Sbjct: 266 QKSVDTCELFFEDVRLPASALLGKENQGFYMLMNQLPRERLIIGVGCQAHTEFMFEETRN 325

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R+R   G  L +   ++  +A++   I    +          E K            A
Sbjct: 326 YVRQRKAFGKTLGNIQTIQHKLAELKTLICIGRSFQDDCLRLESEGK-------LDTYTA 378

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            ++KYW   +   V  E ++  GG GY+ E  IAR + ++   +I  GS   M   +  
Sbjct: 379 SMSKYWGSDVINKVATECLQLHGGWGYMWEYPIARAFCDARVGAIYGGSNEIMKELIYR 437


>gi|121604132|ref|YP_981461.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593101|gb|ABM36540.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 596

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 89/510 (17%), Positives = 201/510 (39%), Gaps = 70/510 (13%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    ++ +  G         F      +   I AA   +         + P +
Sbjct: 71  VTTTPGFKEAFKQYVEGGWQGLQHPADFGGQGLPK--TIGAACGEMANSANMSFALCPML 128

Query: 157 TSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL+T  +  ++  +  K+ S ++  T             + LTE + G+D+AA+
Sbjct: 129 TDGAIEALLTAGSEALNAVYLEKMISGQWTGT-------------MNLTEPQAGSDLAAV 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
            S+ +  +DG Y + G K F++    D       ++LA+  G       +  F+VP+ L 
Sbjct: 176 RSRAEPQADGSYKVFGTKIFITYGEHDMAENIVHLVLARASGAPEGVKGISLFVVPKFLV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    +++K+G +++ T  L+F +     G+L+G+ N     +  M   
Sbjct: 236 NADGTLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAAGYLVGEENRGLEYMFIMMNS 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDI 366
                 +  ++    +  +A+ +A+ R  S            +I  P ++R +  +    
Sbjct: 296 ARYAVGVQGIAIAERAYQKAVGFAKDRVQSRPVDGSIKASAPIIHHPDVRRMLMTMRAYT 355

Query: 367 AAATALSFRLA------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               A++   A      +   +A+ R +  A+   M P+ K +  +M+  V +  ++  G
Sbjct: 356 EGCRAMASVAAAAYDATHHHPDAEVRKQSLAFYEFMVPLVKGYSTEMSQEVTSLGVQVHG 415

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGS 478
           G G+IEE   A+++R++   +I  G+      D++       G  + + + + +E    +
Sbjct: 416 GMGFIEETGAAQYFRDARILTIYEGTTAIQANDLIGRKTARDGGQIAKGIAAQIE---AT 472

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF--------L 530
             + +     D++++ K  K   +   + +   ++     R   N +   F        L
Sbjct: 473 ENELLAQGSADALAVAKRLKAARQAFVQVVEFVAANT---RTSPNAV---FAGSVPYLML 526

Query: 531 ENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
               +        +L  +   A  +D+ ++
Sbjct: 527 AGNVVAGWQLARSLLVAQEQLAQGVDAAFM 556


>gi|312962234|ref|ZP_07776726.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|311283571|gb|EFQ62160.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 385

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 140/397 (35%), Gaps = 28/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   QEL R       +     P  + W+K    P  H + R++   GL        F  
Sbjct: 4   TQEHQELRRSVRAFVDR--EINPHVDEWEKAGRFP-IHEIFRKAGDLGLLGISKPEKFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ I AA  +  +        +   +      +A   +  +  ++     S E  
Sbjct: 61  MGLDYSYSIVAAEEFGTIHCGGIPMSIGVQTDMCTPALARFGSDELRDEFLRPAISGEQ- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          +G++E   G+D+A + +  +K            W  +SP +D   
Sbjct: 120 ------------VGCIGVSETGAGSDVAGLKTHARKDGADYVINGSKMWITNSPSADFIC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++   +  G+       K+G  S+ T ++ F          +  
Sbjct: 168 LLANTSDDKPHINKSLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFDEVRIPQRNRIGH 227

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G +  M       L  A   + G+   +   I Y + R   G  LID  V+   +A+
Sbjct: 228 EGAGFMMQMLQFQEERLFGAANMIKGLEHCIDSTIAYCKERRTFGKALIDNQVIHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           ++ +I    AL ++    + + +  +        +A + K    ++   V    ++  GG
Sbjct: 288 LSTEIECLRALVYQATEQYIKGQDVTR-------LASMAKLKAGRLGRDVSDSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G++ +  +AR YR+    SI  G+   M+  +  L+
Sbjct: 341 MGFMWDNPVARAYRDVRLVSIGGGADEIMLGIICKLM 377


>gi|319760875|ref|YP_004124812.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115436|gb|ADU97924.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 384

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 130/376 (34%), Gaps = 35/376 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V FH  W         + R++  +GL  ++    +        H                
Sbjct: 30  VPFHAQWERDGIVPKEVWRKAGREGLLNTMLPEPYGG-GGDFGHAAILIEEVARTGASGL 88

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    +      W P++ + E             +   + +TE   G+
Sbjct: 89  GFPLHSDIVAPYILAYGSTEQKDRWLPRMAAGE-------------LIGAIAMTEPGAGS 135

Query: 210 DIAAITSQGQKISD---GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
           D+ ++ +  + + D     Y L+G K F+++ + S+  I++A+    +G   V  ++ + 
Sbjct: 136 DLKSVRTTARLVKDSEGDHYILNGSKTFITNGINSEIVIVVAKTSPELGAKGVSLIVVEE 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   KIG  +  T EL F N     G LLG+ N+    +        L  A+
Sbjct: 196 GTPGFSKGRKLEKIGLMAQDTSELFFDNVKVPVGNLLGEENMGFKYLMKELAQERLVVAV 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + + +   L + + Y R R   G  + +    +  +A+                    +
Sbjct: 256 RAAASIEAFLQKTVDYTRERKAFGQTVFEFQNTRFKLAEAKAQATMLRVFVDDCMRLHMQ 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   E AA         K     +   ++ E ++  GG GY+ E  + R + ++    I
Sbjct: 316 RQLTPERAAM-------VKLNATALQNRLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   L
Sbjct: 369 YGGSDEIMKEIIARTL 384


>gi|282859245|ref|ZP_06268366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282587978|gb|EFB93162.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 568

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 157/433 (36%), Gaps = 45/433 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
                +   GL      R +  +          + +         +L S        +  
Sbjct: 93  ENFEATRKAGLWGVSMPRRYGGLNLPNVVFSMMSEMISAGDGGFQNLWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISD 223
             +    + + P+I + E               + + LTE   G+D+  +  +      +
Sbjct: 152 FGSEEQRQKYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKASFDEKE 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G  
Sbjct: 198 KCWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKREGGVDVRHIEHKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G   +     V  +     L  A  SV   + +  EA+ YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGSTRMGLIKYVMALMNGARLGIAAQSVGVSQEAYNEALAYAKD 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA----------- 390
           R   G  +I+ P +   ++ +   + A  +L ++ A   D  K+  + A           
Sbjct: 318 RAQFGKKIINMPPVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIARDEKLSPEERQ 377

Query: 391 ------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    PI K    +       + +   GGSG+I E    R +R++   SI  
Sbjct: 378 EMKKYTRLADAFTPIAKGMNSEYVNQNAYDGISVHGGSGFIMEYKCQRLFRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--------- 495
           G+    V+  +  +  GT L   +   LE+++    + +  ++   +   +         
Sbjct: 438 GTTQLQVVAAIRYITNGTYL-SIIREMLEEEVSVEMEPLRKLIATLVEDYEAAVNKVKEI 496

Query: 496 EDKGLARFLTEKI 508
           E++ +  FL  ++
Sbjct: 497 ENQDVQDFLARRL 509


>gi|226308613|ref|YP_002768573.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187730|dbj|BAH35834.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 389

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 129/371 (34%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  PA   L++R     L        F  +      ++ A           
Sbjct: 31  PGAAARDESKEFPA--QLVKRLGQQDLMGISVPEEFGGLGLSTRTQLVAIEEVARTDAAL 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +        + +  +      W P++ S E             +  G  LTE   G
Sbjct: 89  ASIYTAHYLGLEPILVGGSEEQKHRWLPQLASGE-------------LLAGFALTEPDAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DIA++ +  ++  DG +      +  ++  +D  ++ A+ +   G   +   +      
Sbjct: 136 SDIASMRTVARREDDGWHLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVVPKGTP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y   ++K+G RS  T  +   +    L   +G                 +D A M+ 
Sbjct: 196 GISYSEPQDKMGIRSAPTYTVYLDDVVLPLDSVIGTEGRGGNIALTALNRARIDVAAMAN 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                +      YA  R   G  + D   ++  +      + A+   +   A+  D+ + 
Sbjct: 256 GIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLVASRVTADWAADVKDDGQD 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                      A I+KY   +   +++ + ++  GG+G++ E  I R YR+     I  G
Sbjct: 316 IRRA-------ASISKYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRILRIFEG 368

Query: 446 SGNAMVLDVLN 456
           +    +L +  
Sbjct: 369 TSQIQLLTIAG 379


>gi|72384229|ref|YP_293583.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72123572|gb|AAZ65726.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 380

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 150/400 (37%), Gaps = 31/400 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               E+ R A     +     P   R  + E  P  + + RR+   G     +  ++   
Sbjct: 5   AEHHEMIREAVRRFAE-EEIAPVAHRLWEEESFP--YEIWRRAGELGYIGLPYPEAWGGS 61

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                    A              +  + T+AS++    T      +   I +       
Sbjct: 62  GGDWLGFAIALEEIARVDCAVAVAIMANSTAASLLNNYGTDSQKARFLRPILTG------ 115

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF--IM 245
                  +    +GLTE   G+D A I ++   + DG + ++G K F+S+  S+    I+
Sbjct: 116 -------TQVGCIGLTEPNAGSDAANIQTRAV-LKDGCWVINGAKTFISNSGSEITGPIV 167

Query: 246 LAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300
           +A V G    G   +   +      G  + +  +KIG R + T EL F +       LLG
Sbjct: 168 IAAVTGTRPDGRKEISNFIVPNGTPGFSHGKKLHKIGWRGSTTFELFFEDCAIPADHLLG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           ++ V             +    + +  ++ SL  ++ Y   R   G  L     ++  +A
Sbjct: 228 EVGVGLRQTLSQVSTGRILIGTLGLGILQGSLERSVRYMSERTAFGKTLNQFQSLQFKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A    AA  + +  A + DE +    +A+ A       K +  + A     +A++  G
Sbjct: 288 DMATHAHAARLMLYDAAVAKDEGRPYDRQASMA-------KLFATEKAMEAAHQAVQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G+G + E +++R + ++    I+ G+     + +   + +
Sbjct: 341 GNGIMTEYAVSRAFGDAKVLEIVEGTSEIQRMIISRDVMQ 380


>gi|312194623|ref|YP_004014684.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311225959|gb|ADP78814.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 399

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 125/385 (32%), Gaps = 34/385 (8%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++ +    GL        +  +                  +    +++ 
Sbjct: 35  ELEHKDEYPAEIVEQMKEMGLFGITIPEEYGGLGESLLTYALVVEEIARGWMSVSGVINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A ++    +        PK+ + E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYLLLQHGSDEQKARLLPKMATGE-------------VRGAFSMSEPGCGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLEDGSP 267
           T++  +  +         W  +   S     L + +            FL+ +    G+ 
Sbjct: 142 TTRAARDGEDYVINGQKMWLTNGAQSGVVATLVKTDEGADSVYRNMTTFLLEKEPGFGTT 201

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            GL       K+G +   T E+   N        L       +    ++       ++ A
Sbjct: 202 GGLTIPGKLEKMGYKGVETTEMVLDNHRVPASAILGGPEKTGKGFYQMMDGVEVGRVNVA 261

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +   M  +   AI YA++R   G  + D   +   +A++A  I A   +    A   D
Sbjct: 262 ARACGIMIRAFELAIAYAQQRKTFGHPIADHQAIAFKLAEMATKIEAGHLMMVNAARKKD 321

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    EA  A+ +A        +    V  EA    GG GY +E  I R +RE+P   
Sbjct: 322 RGERNDVEAGMAKFLA-------SEYCYEVTTEAFRIHGGYGYSKEYEIERLFREAPFML 374

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFE 466
           I  G+       +   L +   L +
Sbjct: 375 IGEGTSEVQKRIISRALLRDYKLAQ 399


>gi|15667238|gb|AAL02422.1| isovaleryl-CoA dehydrogenase [Frankia sp. EuIK1]
          Length = 384

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 128/366 (34%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL+ +    G+        +  V       +          +     M      + ++  
Sbjct: 39  ALIEQMKRLGVFGLAIPEPYGQVDVSTVCYVLVTEELARGWMSLAGAMGGHTVVSKLLLE 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++ + E   T             + LTE  GG+D+ A+ +  +    G
Sbjct: 99  YGTEEQKQRYLPRMATGELRAT-------------MALTEPGGGSDLQAMRTGARPAGGG 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S    ++ + +         +  LL +  P G    R   K+G +
Sbjct: 146 YVINGSKTWITNARRSGLVALVCKTDPGVEPAHRGMSILLVEKGP-GFEVSRDLPKLGYK 204

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F++        L G      G +     +  L  A  +    R +  +A+ Y
Sbjct: 205 GVESCELSFTDCRVPREALLGGVEGRGFGQMMRGLEVGRLQVAARATGVGRAAFDDALRY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A  + AA  L    A  +D  +    EA  A     
Sbjct: 265 AQERESFGRPIWQHQSVGNHLADMATKLTAARQLLLHAARRYDTGERADLEAGMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             KY+C ++A  V   A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 320 --KYFCSEVAMEVALSAIRVHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIAAQL 377

Query: 459 EKGTNL 464
            K   L
Sbjct: 378 VKRGGL 383


>gi|85706103|ref|ZP_01037198.1| Acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669267|gb|EAQ24133.1| Acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 377

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 120/355 (33%), Gaps = 27/355 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL C      +        H+         A L +      S   A  +    +  
Sbjct: 44  AGALGLLCPSIPEEYGGAGGDFGHEAVICMEQGRANLASWGNPIHSGIVAHYILAYGSEA 103

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + W PK+ S E                 L +TE   G+D+  I ++  +  +  Y LS
Sbjct: 104 QKRKWLPKMVSGEM-------------VGALAMTEPAAGSDVQGIKTRAVRDGNA-YRLS 149

Query: 230 GHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATV 287
           G K F+++       I+ A+ + + G   +  ++ +     G    R   K+G  +  T 
Sbjct: 150 GQKTFITNGQHAELIIVAAKTDPKEGAKGISLVVVETEAAQGFTRGRNLEKVGMHAGDTS 209

Query: 288 ELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           EL F N        L G+       +        L  A  +   M  ++   I Y + R 
Sbjct: 210 ELFFDNIEIPPENILGGEEGRGFYQMMQQLPQERLIIACGAQGAMEGAVERTITYCKERE 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             GG ++     +  +A+     A   A                E+AA A       KYW
Sbjct: 270 AFGGPILQFQNTRFKLAECQTKTAVCRAFLDACITEHMRGDLSVEKAAMA-------KYW 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  V+ + ++  GG GY++E  IA  + ++    I  G+   M   +   L
Sbjct: 323 LTDSQGEVLDDCLQLHGGYGYMQEYDIAEMWADARVQRIYGGTNEIMKELIARAL 377


>gi|121606175|ref|YP_983504.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595144|gb|ABM38583.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 593

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 93/497 (18%), Positives = 187/497 (37%), Gaps = 54/497 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVE 98
            +  L            E  G        +E A+        L+      P   +   V 
Sbjct: 13  AMQELAGLPQVSTLPGFEDHGIDTAQAVLEESAKFCESVVAPLNWEGDKTPSSWKDGVVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    R+    G    I    F      +      A +   A L        +  +
Sbjct: 73  TTPGFKEAFRQFAEGGWQGVIHPPEFGGQGFPKLIATPCAEMLHAASLSFALCPMLTDGA 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              + +  +  + + +A K+ S E+  T             + LTE + G+D+AA+ S+ 
Sbjct: 133 IEALLVAGSDELKRKFAAKLISGEWTGT-------------MNLTEPQAGSDLAAVRSRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
           +   DG Y + G K F++    D       ++LA+V G       +  F+VP+ + +   
Sbjct: 180 EPQEDGTYKVFGTKIFITYGEHDMTGNIVHLVLARVPGAPEGVKGISLFVVPKFMVNDDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
             G  N      +++K+G +++ T  L+F +     G+L+G  N     +  M       
Sbjct: 240 SLGERNDAWCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGQENRGLEYMFIMMNAARFA 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATA 371
             +  ++    +  +A+ +A  R  S           +I+ P +KR +  +   +  A A
Sbjct: 300 VGMQGIAIADRAYQQAVRFAHDRAQSRDLAGSAGPVAIINHPDVKRMLLTMRAHVEGARA 359

Query: 372 LSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++       +A+   +  +R +  A    + P+ K +  +M+  + +  ++  GG GYI
Sbjct: 360 LAYVAAAASDMAHHAADDATRIQNQAVYEYLVPVVKGFSTEMSIDMASLGVQVHGGMGYI 419

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQL---FSTLEQDLGSSG 480
           EE   A+HYR++   +I  G+      D++    L     + + L    +T EQDL +  
Sbjct: 420 EETGAAQHYRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALCDRIATTEQDLAAHD 479

Query: 481 KKVITILRDSISLCKED 497
                 +  ++   ++ 
Sbjct: 480 NADCNAMLVALRQGRQA 496


>gi|197122598|ref|YP_002134549.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172447|gb|ACG73420.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 382

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 141/378 (37%), Gaps = 24/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++   PA   L+R     GL       ++            A      A    
Sbjct: 26  PAAAENDRLRRFPA--DLIRGLGELGLLAVNVPAAYGGSEAGAVAYALAIMEIAAADCAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+ +     ++A   T    +   P++ + E             +A    L+E + G
Sbjct: 84  AVTMAVTNMVGELIARFGTEAQKQRHLPRLAAAEV------------LAGAFALSEPQAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ ++  +   G       +W  S  ++   ++ A+     G   V   L +    
Sbjct: 132 SDAGAMRTRAVRRGGGWVIDGAKQWITSGDVAGVLVVWARTGPAEGGGGVTAFLVEAGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL   R ++K+G R+++TV L F          LG++               +  A  + 
Sbjct: 192 GLQVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDGGRVGIASQAT 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +R +L  ++ YAR R   G  + +   +   +AD A++   A  L+ R A   +  + 
Sbjct: 252 GTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADTAVEHDTARLLALRAAALKEAGRP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EA+ A       K W  + A   +  A++  GG GY E+  +AR++R++   +I  G
Sbjct: 312 FTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVARYFRDARVQTIYEG 364

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +     L +   L K   
Sbjct: 365 TSEIQRLVIARELLKDGG 382


>gi|220918318|ref|YP_002493622.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956172|gb|ACL66556.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 559

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 116/510 (22%), Positives = 205/510 (40%), Gaps = 43/510 (8%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMAN 78
           A +Q P  +   A+ +D LL   +A        S +  EL  LG       A +  ++A 
Sbjct: 3   AFHQDPPILPH-AFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQ--QLAE 59

Query: 79  Y-NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P L  + P G R D++E  P W    R +   GL  + ++R    + R      + 
Sbjct: 60  RLVEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERRHGILSR----VHQM 115

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A +YL+      +    ++T  +   L+       D AP+       P   +     +  
Sbjct: 116 AMVYLLEPSMDVYACPLAMTDGAARTLL-------DLAPRALVERAVPRLTSRDPARTWT 168

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
            G  +TE+ GG+D++   +  +   +    L G KWF S+  ++  + LA+ EG      
Sbjct: 169 SGQWMTERAGGSDVSGTETVARPDGEAF-RLWGTKWFSSATTAEMALALARPEGNPPGSA 227

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F +   L DG+ NG+   RLK+K+G R   T EL         +  L+     +  
Sbjct: 228 GLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAISP 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A   
Sbjct: 288 MLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAGFL 347

Query: 372 LSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           L+FR       A++   +A   A  R + P+ K    K A AV ++A+E  GG+GY+E+ 
Sbjct: 348 LAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVEDT 407

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
            + R  R++    I  G+ N + L+             L  ++   L Q    + +  + 
Sbjct: 408 GLPRLLRDAQVLPIWEGTTNVLALEAQRALAAEGAAEALAAEIQERLSQARDPALRPAVQ 467

Query: 486 ----------ILRDSISLCKEDKGLARFLT 505
                         +    +  +  AR L 
Sbjct: 468 AATGALARARAALAAGDAPEVREAGARRLA 497


>gi|307565066|ref|ZP_07627579.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
 gi|307346235|gb|EFN91559.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
          Length = 569

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 91/479 (18%), Positives = 174/479 (36%), Gaps = 56/479 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L++ GE     T    +   +   P L          +++ +       L  +   GL  
Sbjct: 55  LDVTGEIAG-ETIAPNSEEVDLEGPHLID--------NRMHYASKTLENLEATRKAGLWG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +          + +         ++ S        +         + + P+
Sbjct: 106 VSMPRRYGGLNLPNVVFSMMSEMISAGDGGFQNIWSLQSC-IDTLYEFGNEEQRQKYIPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLS 236
           I + E               + + LTE   G+D+  +  +      +  + L+G K F++
Sbjct: 165 ICAGE--------------TMSMDLTEPDAGSDLQRVMLKASFDEKENCWRLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  SD  ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N  
Sbjct: 211 NGDSDIHLVLARSEEGTKDGRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L G+  +     V  +     L  A  SV   + +  EA+ YA+ R   G  +I+ P 
Sbjct: 271 AELCGNTRLGLIKYVMALMNGARLGIAAQSVGVSQEAYNEALAYAKERAQFGKKIINMPP 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-----------------AYARIMA 397
           +   ++ +   + A  +L ++ A   D  K+  + A                   A    
Sbjct: 331 VYDMLSRMKAKLDAGRSLLYQTARYVDLYKALEDIARFEKLSPEERQEMKKYTRLADAFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K    +       +++   GGSG+I E    R YR++   SI  G+    V+     
Sbjct: 391 PIAKGMNSEYVNQNTYDSISVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAANRY 450

Query: 458 LEKGTNL---FEQLFSTLEQDLGSSGKKVITILRD---SISLCKEDKG------LARFL 504
           +  GT L    E L   + +D+    K++  ++ +   SI+  KE +       LAR L
Sbjct: 451 VMNGTYLGIMREMLAEPVSKDMQPLSKRIEKMVEEYESSINKVKEMESQDAQDLLARRL 509


>gi|188992153|ref|YP_001904163.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167733913|emb|CAP52119.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris]
          Length = 382

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 148/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     ++    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIQLLGENGLMGIEVPAEYGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                    A      A      +MS  +    + +    T    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIMSVNNSLFCTGILKNGTEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K  DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D +  G    + + K+G R++AT E+EF++   ++     V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  K  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 227 GAEGEGFKTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|326933326|ref|XP_003212757.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 476

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 128/360 (35%), Gaps = 27/360 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +R++   G                +                 
Sbjct: 117 PHMAEWDEKEIFPV--ETMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTST 174

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              MS     A M+           + P + S E                   LTE   G
Sbjct: 175 TAYMSIHNMCAWMIDTFGNEEQRHRFCPSLCSME-------------KFASYCLTEPGSG 221

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  ++ +   
Sbjct: 222 SDAASLLTSAKRKGD-TYVLNGSKAFISGGGDTDVYVVMCRT-GGPGPKGISCVVLEKGT 279

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   L     G    MK      ++ A  S
Sbjct: 280 PGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVGNRLGAEGQGFNIAMKGLNGGRINIASCS 339

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  +   R   G  L     ++  +A++A  + AA  +    A +  + +
Sbjct: 340 LGAAHASVLLAQEHLTVRKQFGEPLASNQYLQFRLAEMATRLVAARLMVRNAARALQDGR 399

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A ++  + K +      A+  +A++  GG GY+++ ++ +  R+   + IL 
Sbjct: 400 ED------AAVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILE 453


>gi|29831818|ref|NP_826452.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|5524296|gb|AAD44196.1|AF143210_1 acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|15823939|dbj|BAB69160.1| acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|29608935|dbj|BAC72987.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 386

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 148/405 (36%), Gaps = 45/405 (11%)

Query: 76  MANYNTPQLHAYGP----GGERW------DKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           M +  TP+L                    D  E H   + ++R     GL    +   + 
Sbjct: 1   MDHRLTPELEELRRTVEEFAHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +     A  I    L  +    A  L +     A  + L  T     +W P++ S E  
Sbjct: 61  GMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPIHLFGTDAQKAEWLPRLCSGE-- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD-- 241
                      +    GLTE  GG+D  A  +  +       + ++G K F+++  +D  
Sbjct: 119 -----------ILGAFGLTEPDGGSDAGATRTTARLDESTNEWVINGTKCFITNSGTDIT 167

Query: 242 AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             + +  V GR   G  L+  ++      G       +K+G  ++ T EL F++      
Sbjct: 168 GLVTVTAVTGRKPDGKPLISSIIVPSGTPGFTVAAPYSKVGWNASDTRELSFADVRVPAA 227

Query: 300 GDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
             L     G  + ++I   LD   +++S +   LA     E++ YA  RH  G  +    
Sbjct: 228 NLLGEQGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAGERHAFGRNIGAYQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+ +    A       A+     +   +EAA       I K +   +A     
Sbjct: 285 AIQFKIADMEMKAHMARVGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAVDNAR 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 338 EATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|315502587|ref|YP_004081474.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409206|gb|ADU07323.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 380

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 143/416 (34%), Gaps = 45/416 (10%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
            +    VH E   L    L+  A           P    +   G   D+         + 
Sbjct: 3   QHLYEPVHDEFRDLCRRFLTREA----------VPHHERWEADGI-VDR--------EVW 43

Query: 108 RRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R +   GL     D  +     R            + A          +   A  +  +T
Sbjct: 44  RAAGAAGLLGPDVDPEYGGGGQRDFRFNAVLDEEIVAAGCTGLGFGLHNDVVAPYLTELT 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K W P   S               +   + ++E   G+D+A I +   +  D + 
Sbjct: 104 TGDQRKRWLPGFCSG-------------DLVTAIAMSEPGAGSDLAGIRTSAVRDCDSL- 149

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  M+D  +++A+     G   V  ++ +    G    R   K+G ++N 
Sbjct: 150 VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLVVVESGTPGFSRGRRLAKVGLKAND 209

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F +       L+G  N     +        L  A+ +V+     LA  I YAR R
Sbjct: 210 TAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSIAVAAVAACEKLLALTIEYARSR 269

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      +  +A++  ++  A          F+  +    +AA A+        
Sbjct: 270 EAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAAKAKW------- 322

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  ++   V    ++  GG G++ E  +A+ + +S   +I  G+   M   +   L
Sbjct: 323 WTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIMKEIIGRGL 378


>gi|148230460|ref|NP_001086632.1| medium-chain acyl-CoA dehydrogenase [Xenopus laevis]
 gi|50416477|gb|AAH77210.1| Acadm-prov protein [Xenopus laevis]
          Length = 423

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 120/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL        +  +                        +  +      V + 
Sbjct: 79  LIKRAWELGLMNGHIPEQYGGLALGIFDTCLITEEIAYGCTGVQTAIEANSLGQMPVIIA 138

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K +  ++              +  +     +TE   G+D+A + ++ +K  +  
Sbjct: 139 GNEAQQKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAGLKTRAEKKGNEY 185

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+                + D +  G+   R +  +G R
Sbjct: 186 IINGQKMWITNGGKANWYFLLARTNPDPKVPAGKAFTGFIVDANSPGIQIGRKELNMGQR 245

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 246 CSDTRGIVFEDVRVPA---ENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEAT 302

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G ++ +   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 303 KYAVERKTFGKLIAEHQAVSFLLAEMAMKVELARLAYQRAAWEIDLGRRNT-------YY 355

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  V ++A++  GG+G+  +  + +  R++    I  G+     L +  
Sbjct: 356 ASIAKAYAGDIANQVASDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIISR 415


>gi|312080484|ref|XP_003142619.1| acyl CoA DeHydrogenase family member [Loa loa]
 gi|307762220|gb|EFO21454.1| acyl CoA DeHydrogenase family member [Loa loa]
          Length = 419

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 111/323 (34%), Gaps = 21/323 (6%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             +        ++   ++++   +    K        R         +    V  G  +T
Sbjct: 103 GSVVLWLFRYSTLHHGTIISCCASYYSWK--------RRAKKKYLGMLAAEPVIAGYCVT 154

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPR 260
           E   G+D++ I  + +K  D         W      +  F +LA+ +             
Sbjct: 155 EPSAGSDVSGIKMKAEKKGDSYVLNGIKAWITGGGPAKWFFVLARTDPDPKVQPGKAFTA 214

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
            + DG   G+   + +  +G R + T  + F +    +   LG L            +  
Sbjct: 215 FIVDGDTKGISRGKKERNMGQRCSDTRTIIFEDVVVPMQNILGTLGAGFKIAMGAFDMTR 274

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  +V     +L EA  YA  R   G  ++    +   +AD+A ++  A  +++R A
Sbjct: 275 PAVAAGAVGLSWRALDEACKYALERKAFGAPIVANQGISFILADMAANLELARLVTYRAA 334

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +           A     A + K +    A   ++ A++  G +G+ +E  + +  R++
Sbjct: 335 MAISN-------KACFSYYASVAKCFAADSANIAVSNAVQIFGANGFNKEYPVEKLMRDA 387

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     + +   + +
Sbjct: 388 KIYQIYEGTSQIQRIVISRHILQ 410


>gi|209547822|ref|YP_002279739.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533578|gb|ACI53513.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 598

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 95/495 (19%), Positives = 169/495 (34%), Gaps = 75/495 (15%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79
           D+LF LN        N             N P             ++     E A++A  
Sbjct: 10  DTLFVLNDVLGLERYN-------------NLPGFADAT-----PDMIEAILGEAAKVAEE 51

Query: 80  N-TPQLHAYGPGGE-RWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
              P  ++    G  R D   V     +    +     G         F        + +
Sbjct: 52  VLFPVNYSGDQEGCTRHDDASVSTPKGFQDAYKAYRDGGWIGLAVPEEFGGQGLP--YTL 109

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             A     +      +M P +T  ++ A+    +      + PK+    +  T       
Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSTEQKATYLPKMVDGAWTGT------- 162

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
                 + LTE   GTD+  + ++    +DG Y ++G K F+S+   D       ++LA+
Sbjct: 163 ------MNLTEPHCGTDLGMLRTKAVPQADGSYKIAGQKIFISAGEHDLADNIVHLVLAR 216

Query: 249 VEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           +EG       +  F+VP+ L          N +    +++K+G  +NAT  + +    GF
Sbjct: 217 IEGAPEGTKGISLFIVPKFLVGKDGALGARNAVTCGAIEHKMGIHANATCVMNYDEATGF 276

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  N     +  M     L   +  ++   ++   A +YAR R               
Sbjct: 277 LIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGPKAPDKK 336

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPI 399
              +I  P ++R +  I     A  A     A   D A   +++           ++ PI
Sbjct: 337 ADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRATDDKERQTADDILGLVTPI 396

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K             A +  GG GYIEE  ++++ R++    I  G+     LD++   L
Sbjct: 397 LKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKL 456

Query: 458 LEKGTNLFEQLFSTL 472
              G      LF  +
Sbjct: 457 ALNGGRAAMALFKEI 471


>gi|254515733|ref|ZP_05127793.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219675455|gb|EED31821.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 386

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 127/379 (33%), Gaps = 25/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD     P     L  +   G            +   +                 
Sbjct: 26  PNAALWDAESIFP--KDALAAAGELGFMGMYTPEDAGGLALSRLDASLIVEELSRGCTTT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    + SM+    +  V + W P +                       LTE   G
Sbjct: 84  AAFLTIHNMATSMIGRYCSAAVIEQWCPDLVMG-------------KTLASYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A++ ++  K  D  Y ++G K F+S       +++    G  G   +  LL      
Sbjct: 131 SDAASLRTRADKDGDD-YLVNGSKVFISGAGETDVLVVMLRTGDGGPKGITALLIPADAP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y + + K+G  +  T  + F N        LG          +      ++ A  SV
Sbjct: 190 GITYGKKEEKMGWNAQPTRMISFDNVRVPQANRLGAEGQGFAIAMEGLDGGRINIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L EA  Y   R   G  + +    +  +AD+  ++ AA  +    A+  D    
Sbjct: 250 GTAQQALQEAAAYVAEREQFGQAIAEFQATQFRLADMLTEVVAARQMVRLAASKLDRKD- 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A     + K +   +   V  +A++  GG GYI E  + RH R++  + IL G
Sbjct: 309 -----AQASTYCAMAKRFATDLGFRVCNDALQLFGGYGYIREYPMERHLRDTRVHQILEG 363

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +   M + +   +     L
Sbjct: 364 TNEIMRVIIARRMMMDGAL 382


>gi|284989927|ref|YP_003408481.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284063172|gb|ADB74110.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 384

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 135/378 (35%), Gaps = 27/378 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER +  +  P    L  R+   GL           +    A  +  A  +         L
Sbjct: 26  ERIEDEDRIPD--ELRARAAEMGLFGYALPEEHGGLDVTMAEDVELAFEFGYTTPAFRSL 83

Query: 152 M-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + +  +  ++A   +    K + P++ S E             +     LTE   G+D
Sbjct: 84  FGTNNGIAGQVIAKFGSDEQRKTYLPRLASGE-------------LIGSFALTEAEAGSD 130

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNG 269
            A + +  ++  DG       ++  ++P++D F++ A+ +    G   +   + D    G
Sbjct: 131 PAGLRTTARRNGDGWVLNGTKRYITNAPIADLFVVFARSDPAEKGGRGISSFVVDAKAPG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +       K+G     T E+   +       L+G+          +     L  A + V 
Sbjct: 191 VTVGPRDKKMGQAGAWTAEVFLDDARVPADALIGEEGRGYAKALTVLSRGRLHIAALCVG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  L E++ YA      G  +    +++  +AD   ++ A  A+   +A  +D  +  
Sbjct: 251 MAQRVLDESVAYAATAKQGGAPVGRFQLVQAQLADTHAELLAGRAMVRDVAARYDTGEDT 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S       I     K +C +M    +  A++  GG GY+    + R YR++    +  G+
Sbjct: 311 S-------IGPSSAKLFCTEMVGRAVDRAVQVHGGLGYLRTTPVERFYRDARLYRLYEGT 363

Query: 447 GNAMVLDVLNLLEKGTNL 464
                + +   L +   +
Sbjct: 364 SEVQRVIIGGGLLRDAGM 381


>gi|46199854|ref|YP_005521.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|46197481|gb|AAS81894.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27]
          Length = 372

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 129/364 (35%), Gaps = 34/364 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           W  L   +   GL        +  V        +    L       A  +   S     M
Sbjct: 37  WPQLKALA-ELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYM 95

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    + +   +   E+                  LTE + G+D  ++ ++ +++
Sbjct: 96  LLRFGSEAQKRRYLVPLARGEW-------------IGAFCLTEPQAGSDAKSLRAEARRV 142

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  S+  +  ++++A+ E       +   L +    GL + R + K+G 
Sbjct: 143 KGGFVLNGVKSWITSAGHAHLYVVMARTE-----KGISAFLVEKGTPGLSFGRPEEKMGL 197

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
            +  T E+     F      L      +     L  LDS  + V+   V +A      A 
Sbjct: 198 HAAHTAEVRLEEVFVPEENLLGEEGWGLAYA--LAGLDSGRVGVAAQAVGIARGAFEIAK 255

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  L +   +   IAD+ + IAAA AL    A   D  +  + EA+ A++ 
Sbjct: 256 AYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLF 315

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A             V  EA++ +GG GY  +  + R+YR++    I  G+     L +  
Sbjct: 316 ASAAA-------VEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIAR 368

Query: 457 LLEK 460
            L +
Sbjct: 369 ELYR 372


>gi|284039956|ref|YP_003389886.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283819249|gb|ADB41087.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 599

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 81/482 (16%), Positives = 177/482 (36%), Gaps = 64/482 (13%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D  +      +L+ ++   G+  +     +          +  A +       +  L
Sbjct: 55  NEIDNAKSPELISSLMDKAGELGILGTSVPEEYGGFGTNFNTSMLVAEVTGAGHSFSVAL 114

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +           + PK+ S E+                  LTE   G+D 
Sbjct: 115 SAHTGIGTLPIVYYGNEEQKAKYLPKLASGEWK-------------AAYCLTEPDSGSDA 161

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  ++ +   DG  Y L+G K W  +   +D +I+ A+++       +   + +    G
Sbjct: 162 NSGKTKAKLTEDGKHYILNGQKMWITNGGFADVYIVFAKIDEDK---NLSAFIVERGYEG 218

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
           +     ++K+G + + T ++ F++    +    N+ +      KI +  L+   + +   
Sbjct: 219 ITMNEPEHKMGIKGSDTRQIFFNDCKVPV---ENLLSARENGFKIAVNILNIGRIKLGIA 275

Query: 329 RVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE- 382
            V      +  AI Y+  R      +     +K  +A++AL + A+   S+R   + D+ 
Sbjct: 276 AVGGSKEVINHAIRYSNERKQFKTAISQFGAIKHKLAEMALKVYASETASYRAGQNIDDL 335

Query: 383 -----AKSRSEEAAYARIM------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                 +   + +A  + +        I K    ++   V+ E ++  GG GY  +  + 
Sbjct: 336 IEDLKGQGMDDASAKLKALEQFSIECAIMKVHGSEVLDYVVDEGVQVYGGMGYSADAPMD 395

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           R YR++  N I  G+     + V+++L K       +   L+  +G +    +     SI
Sbjct: 396 RAYRDARINRIFEGTNEINRMLVVDMLLK-----RAMKGELD-LMGPAM--AVAKEIMSI 447

Query: 492 SLCKEDKGLARFLTE--------KIALASSAAALYRAGMN---------DIADVFLENRF 534
                D+    F+ E        K AL  + AA+ +  MN         ++AD+ +E   
Sbjct: 448 PDFNSDEEEGVFVAEKKVIRNLKKAALMVAGAAVQKFMMNLSNEQEILMNVADMAIEIYV 507

Query: 535 LD 536
            +
Sbjct: 508 AE 509


>gi|326329425|ref|ZP_08195749.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952751|gb|EGD44767.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 377

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 130/352 (36%), Gaps = 19/352 (5%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL    +           A  +      +     +G L      +      +  P 
Sbjct: 38  AAKQGLLGIGFPEEAGGEGGGLADTVAVTEGMMSEGASSGLL------AGLFTHGIALPH 91

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           + K  +P +      PT             L +TE  GG+D++ + +   +  D     +
Sbjct: 92  IAKHGSPHLIETYVKPTL-----AGEKIGSLAITEPDGGSDVSHLRTTAVRDGDEFVV-N 145

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           G K F++S +   F+  A   G  G   +  L+ D    G    R   K+G + + T EL
Sbjct: 146 GAKTFITSGVRADFVTTAVRTGGPGAGGISLLVIDKDTPGFTVTRKLEKMGWKCSDTAEL 205

Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +     G L+GD N     + +  +   +  A+         LA    Y R+R   G
Sbjct: 206 AFEDVRVPAGNLVGDENAGFIYIAEAFVTERIALAVQGYGTAARCLALTADYCRQRETFG 265

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             LI + V++  + ++   +  A A +  +   +D   S  +  A     A + K    +
Sbjct: 266 EPLIKRQVVRHKLVEMHRQVEVAKAYTHAVVARYDREGSTQQTIA----EAALAKQTAVE 321

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ +A++  GG+GY+    + RHYR++    I  G+   M      LL
Sbjct: 322 ACTWVVDQAVQLHGGTGYMHGTEVERHYRDARILPIGGGATEVMTDLAAKLL 373


>gi|197123520|ref|YP_002135471.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196173369|gb|ACG74342.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 559

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 116/510 (22%), Positives = 205/510 (40%), Gaps = 43/510 (8%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMAN 78
           A +Q P  +   A+ +D LL   +A        S +  EL  LG       A +  ++A 
Sbjct: 3   AFHQDPPVLPH-AFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQ--QLAE 59

Query: 79  Y-NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               P L  + P G R D++E  P W    R +   GL  + ++R    + R      + 
Sbjct: 60  RLVEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERRHGVLSR----VHQM 115

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A +YL+      +    ++T  +   L+       D AP+       P   +     +  
Sbjct: 116 AMVYLLEPSMDVYACPLAMTDGAARTLL-------DLAPRALVERAVPRLTSRDPARTWT 168

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
            G  +TE+ GG+D++   +  +   +    L G KWF S+  ++  + LA+ EG      
Sbjct: 169 SGQWMTERAGGSDVSGTETVARPDGEAF-RLWGTKWFSSATTAEMALALARPEGNPPGSA 227

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  F +   L DG+ NG+   RLK+K+G R   T EL         +  L+     +  
Sbjct: 228 GLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAISP 287

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A   
Sbjct: 288 MLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAGFL 347

Query: 372 LSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           L+FR       A++   +A   A  R + P+ K    K A AV ++A+E  GG+GY+E+ 
Sbjct: 348 LAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVEDT 407

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
            + R  R++    I  G+ N + L+             L  ++   L Q    + +  + 
Sbjct: 408 GLPRLLRDAQVLPIWEGTTNVLALEAQRALAAEGAAEALAAEIQERLSQARDPALRPAVQ 467

Query: 486 ----------ILRDSISLCKEDKGLARFLT 505
                         +    +  +  AR L 
Sbjct: 468 AATGALARARAALAAGDAPEVREAGARRLA 497


>gi|289670077|ref|ZP_06491152.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 382

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPAEYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADAAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 230 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 288 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 341 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|121609052|ref|YP_996859.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553692|gb|ABM57841.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 605

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 101/527 (19%), Positives = 189/527 (35%), Gaps = 83/527 (15%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE----RWD-- 95
            +  L           L   G        QE AR    +   L A    G+    RW   
Sbjct: 13  AIEHLARIEQIARLPGLADAGLGTARAVLQECARF---SQGVLSALNAEGDKHPARWQDG 69

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V   P + +  R+    G         F      +   I AA + +         + P 
Sbjct: 70  QVSTSPGFKSAWRQYAAGGWQGLQHPAEFGGQGLPK--TIGAACIEMSNGANLSFALCPL 127

Query: 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
           +T A++ AL    +  +   +  K+ S ++  T             + LTE + G+D+A 
Sbjct: 128 LTDAAIEALLIAGSDDLKTCYLEKLVSGQWTGT-------------MNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++ +  +DG Y L G K F++    D       ++LA+V G       +  F+ P+ L
Sbjct: 175 VRTRAEPQADGSYKLFGTKIFITYGEHDMAENIVHLVLARVPGAPEGVKGLSLFVCPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFS------------NTFGFLLGDLNVS 305
                  G+ N +    +++K+G +++ T  L+F                  L+G  N  
Sbjct: 235 VRQDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGAGPGVAGDSTGPGAVSHLVGQENRG 294

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMK 356
              +  M         +  ++    +  +A+ YAR R  S            +I  P ++
Sbjct: 295 LEYMFIMMNAARYAVGMQGIAISERAYQKAVQYARERVQSRPVDGSGNASIAIIGHPDVQ 354

Query: 357 RAIADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +   I    AL+      F  A    +A+ R    A    M P+ K +C + +  
Sbjct: 355 RMLMTMRAGIEGCRALATVAAAAFDTAQHHPDAQIRQHNRACYEFMVPLVKGYCTETSLE 414

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
           +   A++  GG G+IEE   A++YR++   +I  G+      D++               
Sbjct: 415 LTCLALQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVG-------------R 461

Query: 471 TLEQDLGSSGKKVITILRDS-ISLCKEDKGLARFLTEKIALASSAAA 516
              +D G + + +   +  +   L       AR +  ++  A  A  
Sbjct: 462 KTARDGGRTARDIAAQIESTEAELLASGTPAARSMARRLTAARQALL 508


>gi|109098065|ref|XP_001096530.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           isoform 1 [Macaca mulatta]
 gi|297263154|ref|XP_002798752.1| PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial
           [Macaca mulatta]
          Length = 498

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 149/412 (36%), Gaps = 50/412 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T      + PK+ S E+                  LTE   G+D A++ S+    
Sbjct: 30  IILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDAASVQSRATLS 76

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQR 274
            D   Y L+G K W  +  +++ F + A+      +G V    +   + +    G+   +
Sbjct: 77  EDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVERDFGGVTNGK 135

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS--- 331
            ++K+G R + T E+ F NT   +   L    G  +    +  L+S   S+         
Sbjct: 136 PEDKLGIRGSNTCEVHFENTKVPVENILGEVGGGFKVAMNI--LNSGRFSMGSAVAGMLK 193

Query: 332 --LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             +     YA  R      L +  +++   A +A       ++++  A   D+       
Sbjct: 194 RLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPD-- 251

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                I A + K +  + A   ++EA++ +GG GY ++    R  R++    I  G+   
Sbjct: 252 ---CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTKDYPYERILRDTRILLIFEGTNEI 308

Query: 450 MVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVI-TILRDSISLCKEDKGLARFLTEK 507
           + + + L  L+    +        +Q   ++  + I   LRDS+    +           
Sbjct: 309 LRMYIALTGLQHAGRILTARIREFKQAKVTTVMETIGRKLRDSLGRTVDLGLTGNHGVVH 368

Query: 508 IALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +LA SA                 L R G   + +  +  R  +   + + M
Sbjct: 369 PSLADSANKFEENTYYFGQTVETLLLRFGKTIMEEQLVLKRVANILINLYGM 420


>gi|207724418|ref|YP_002254815.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206589639|emb|CAQ36600.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 385

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 130/357 (36%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    A +                +   +V   S  + +  T   
Sbjct: 46  AMGLFGLSIPEAYGGIGLSMAQECEVVYDLGHTSFAFRSVFGTNVGIGSQGILMDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P+I S E             + I   LTE   G+D A++ ++     D       
Sbjct: 106 RAAYLPRIASGE-------------LIISFALTEPDAGSDAASLQTRATPDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMARTGGE-GAGGISAFIVPADAPGITLGKPDRKMGQRGTKTCDVM 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A  YA+ R 
Sbjct: 212 LDNVRVSAANLIGGVAGQGFKTAMKV---LDRGRLHLSALACGMAHRLVTDAAAYAKARR 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK    +     ++A   K +
Sbjct: 269 QFGRPIADFQLIQAMLADSQAELYAGLSMVRDGARRYD-AKPAGRQDHEVSMLASCAKLF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E  + R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKVERFYRDVRLLRLYEGTTQIQQLIIAKHLLR 384


>gi|21230969|ref|NP_636886.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769029|ref|YP_243791.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112588|gb|AAM40810.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574361|gb|AAY49771.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 382

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 149/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     ++    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIQLLGENGLMGIEVPAEYGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                    A      A      +MS  +    + +    T    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIMSVNNSLFCTGILKNGTEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K  DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D +  G    + + K+G R++AT E+EF++   ++     V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVL 226

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  K  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 227 GAEGEGFKTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + +    EAA A+++A        + A  +  +A++  
Sbjct: 287 ADMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLIA-------SEAAMWITHQAVQIH 339

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 340 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|315095162|gb|EFT67138.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL060PA1]
          Length = 382

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIIEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  + ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|158314534|ref|YP_001507042.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109939|gb|ABW12136.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 395

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 28/362 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TP 168
           +   GL       ++  +    + ++R              +   +   A  V L   + 
Sbjct: 42  AARMGLFGFAIPETYGGLGLSMSEEVRLVGELGYTTPSFRSMFGTNNGIAGHVLLEGASA 101

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PKI S E+                  LTE+  G+D A + +   +  D     
Sbjct: 102 EQKETYLPKIASGEW-------------TASFALTEEGAGSDPAGLATSAVRKGDDWIIN 148

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
              ++  ++P++D F++ A+ +    G   +   + +    G+       K+G   + T 
Sbjct: 149 GSKRYITNAPIADVFMVFARTDPAATGGDGISVFMVERDTPGVRVAPKDAKMGQAGSLTA 208

Query: 288 ELEFSNTFG----FLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ F +        + G      G    M+ L    +  A + V   +  L E++ YA  
Sbjct: 209 DVYFDDVRVDPQTLVGGTAGEGRGYNTAMRCLAHGRIHIAALCVGLAQRLLDESVAYAAT 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +++  +AD A D+ AA AL    A +FD+           RI     K
Sbjct: 269 RSQGGRTIGTYQLIQGLLADSATDLYAARALVKETAAAFDDGSDT-------RIGPSCAK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y+  +    +   A++  GG+GY+    + R YR+     I  G+     L +   L + 
Sbjct: 322 YFASEAVGRIADRAVQIHGGAGYMRGVPVERFYRDVRLFRIYEGTSQIQQLVIARQLLRA 381

Query: 462 TN 463
            +
Sbjct: 382 AD 383


>gi|302517911|ref|ZP_07270253.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302426806|gb|EFK98621.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 390

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 142/414 (34%), Gaps = 37/414 (8%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P+ + + +E       S     L R             P     ++    P   A  R  
Sbjct: 2   PADIRRSVERDLPTEESRELIALVRDIAR-----KEIAPHAAAEEESGTFP--RAAFRLL 54

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL    +   +    +  +  ++A      A+L  G  +S  V S   +AL  T   
Sbjct: 55  SDAGLLGLPYAAGYGGGEQPYSVYLQALEELAAARLTVGIGVSVHVLSCHALALHGTKEQ 114

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W                M    +     L+E   G+D AA++++  +          
Sbjct: 115 RAAWL-------------PGMLGGGLLGSYCLSEPTAGSDAAALSTKAVRDGGDWVLSGT 161

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W     +SD   +LA+  G  G   V   L      GL     + K+G + + T +L 
Sbjct: 162 KAWITHGGVSDFCTVLAR-SGGPGAKGVTAYLVPADAPGLSAAPPERKMGLKGSPTAQLH 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHV 344
           F        GD        E     L  LD+  + ++   V LA+A   A       R  
Sbjct: 221 FDGVRV---GDERRIGAEGEGFSLALDALDAGRLGIAACAVGLAQAALDAALDWAAERRQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A  + A  AL    A   D     + +AA A+++       C
Sbjct: 278 FGRAIGDFQGLRFLLADMATAVEAGRALYLAAARRKDAGLPYARQAAMAKLL-------C 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              A  V  +A++  GG GY  +  + R+ RE+    I+ G+     + +   L
Sbjct: 331 TDNAMKVTTDAVQVFGGYGYTTDFPVERYLREAKVLQIVEGTNQVQRMVIGRHL 384


>gi|295704447|ref|YP_003597522.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
 gi|294802106|gb|ADF39172.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319]
          Length = 592

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 83/475 (17%), Positives = 175/475 (36%), Gaps = 41/475 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P     ++ +F+     L+ ++   GL       ++  +   +  K     +       
Sbjct: 49  DPYHNDIEQQDFNKV-VELMHKAGELGLLAHSIPEAYGGLGLDKVSKGLVGEIIGRTSGY 107

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +  +   +    T    + + PK+ S EY                  LTE   
Sbjct: 108 GVAHSNHTCIATLPITYFGTKEQKEKYLPKLASGEY-------------IGAYCLTEPEA 154

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D  A  ++     +   Y L+G K ++++   SD FI  A+V+G          + + 
Sbjct: 155 GSDALAAQTKAVLNPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEH----FTAFIVEK 210

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAI 322
              GL     + K+G + ++T  + + +    +   L  V  G +  +    L   +   
Sbjct: 211 GFEGLSLGPEEKKMGIKGSSTRPVVYEDCLVPVENVLGQVGKGHLIALNVLNLGRFNLGS 270

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   + +   A+ Y + R      + +    K  IA +A  I A+ ++ +R A   +E
Sbjct: 271 ACMGAAKYAFELALAYTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEE 330

Query: 383 A----------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           A          K  +++ A   +   + K +  +    +  E+++  GG+G+I+E  I +
Sbjct: 331 ALGGLYESGNHKLVAKQLAEFAMECSVCKVYGSETLDLIADESLQLHGGAGFIQEYKIEQ 390

Query: 433 HYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            YR+S  N I  G+     L +   LL+K      +L   +E  +         I  + +
Sbjct: 391 VYRDSRINRIFEGTNEINRLLLPTQLLKKADKGEIELSKQVEHAVSELMSGQWEISSNEL 450

Query: 492 SLCKEDKGL--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            L +E + +   R L   +AL  +A   + A +    +  +  +  +       M
Sbjct: 451 -LAREKQAVITTRHL--FLALLGTAFQTFNANLAQEQETLM--KLAEIAIGLFAM 500


>gi|121607872|ref|YP_995679.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552512|gb|ABM56661.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 381

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 128/379 (33%), Gaps = 25/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ E  PA   + ++    GL       ++                        
Sbjct: 24  PVAEALDREERFPA--DIYQQMGELGLFGITVPEAYGGAGLDVTAYALVMEELSRGYASV 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                     +++++   T      +              AP+ +  +     +TE   G
Sbjct: 82  ADQCGLLELVSTLLSAHGTDAQRAKYM-------------APLLRAGLRPAYCITESDAG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++ I +   + +DG        W  ++P++D   +LA+ +   G   +   + D    
Sbjct: 129 SDMSGIRTTATRTADGWDLNGAKLWIHNAPVADLAFVLARTDPAAGKRGMSIFIVDCHLA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSV 325
           G+     ++K+G R++   EL F          L         M   +    +  A ++V
Sbjct: 189 GVSKGAKEHKMGQRASQVGELHFERVQLPREALLGPEGRGFHIMMSALDKGRVGIAALAV 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA  R      + +   ++  +AD+A DI AA  L    A   +    
Sbjct: 249 GIAQAGLEAALDYALSRKQFSSRIAEFQGIQWMLADMAQDIQAARLLVHDAAKRLEAGD- 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A I   + K +    A    A A++  GGSGYI    + R YR++    I  G
Sbjct: 308 ------RASIACSMAKCFASDTAVRHSANAVQIFGGSGYIRGYEVERLYRDAKITQIYEG 361

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +       +   L     L
Sbjct: 362 TNQIQRTIIARDLITHGAL 380


>gi|23098319|ref|NP_691785.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776545|dbj|BAC12820.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 398

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/407 (18%), Positives = 133/407 (32%), Gaps = 50/407 (12%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   G+      F P    LL +    GL        +        +   A    
Sbjct: 26  PYISEWDRNGK------FDP---TLLNKLAELGLMGVCIPEQYGGSGMD--YNSLAIVCE 74

Query: 142 LMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +      +  + +               P  K     
Sbjct: 75  ELERGDTAFRTAVSVHTGLNSMTLLQWGNEQQKQKYLI-------------PQAKGEKIG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFL 257
             GLTE   G+D+AA+ S   K  D         W     ++D FI+ A  + R      
Sbjct: 122 AFGLTEPGAGSDVAALQSTAVKQGDHYILNGQKTWISLCDIADHFIVFAYTKDRSEKHKG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + + S  G   + +K K G RS  T E+ F +         N+     E  KI + 
Sbjct: 182 ISAFIVERSWEGFSSKAIKGKHGIRSGNTGEIFFDHIKVP---KENLLGKEGEGFKIAMS 238

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                    A  +V  +   +  ++ Y   R   G  +    ++++ IA +      +  
Sbjct: 239 ALDNGRFTVAAGAVGQIMACIEASVKYCHERETFGKEIGKHQLVQQMIAKMEAGYQMSKL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R     ++ K  + E + A+  A       C  A     +A++  G  GY +E  + 
Sbjct: 299 LVYRAGELKNQGKRNTRETSLAKWQA-------CDFANKAADDAVQIHGAYGYSDEYPVE 351

Query: 432 RHYRESPANSILLGSGNA----MVLDVLNLLEKGTNLFEQLFSTLEQ 474
           R  R S A  I  G+           VL   E    L  Q+    E+
Sbjct: 352 RFLRNSKAPVIYEGTREVHTIMQAEYVLGYRE--DKLLNQMLPAWEE 396


>gi|330808408|ref|YP_004352870.1| isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376516|gb|AEA67866.1| Putative isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 385

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 137/377 (36%), Gaps = 22/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   P  + W+K    P  H + R++   GL       +F  +    ++ I AA  +   
Sbjct: 20  HDINPYVDEWEKAGRFP-IHEVFRKAGELGLLGISKPAAFGGMGLDYSYSIVAAEEFGTI 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +     T     AL            +  S E       P  +      +G++E
Sbjct: 79  HCGGVPMSIGVQTDMCTPAL-----------ARFGSDELREAFLRPAIRGEQVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A + +  +K  D         W  ++P +D   +LA             ++  
Sbjct: 128 VGAGSDVAGLKTTARKDGDDYVINGSKMWITNAPSADFICLLANTSDDKPHVNKSLIMVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+   +  +K+G RS+ T ++ F +        +     G +  M       L  A
Sbjct: 188 MHSPGISLGQHLDKLGMRSSETAQVFFDDVRVPQRNRIGQEGAGFMMQMLQFQEERLFGA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + G+   +   I Y + R   G  LID  V+   +A++A +I    AL ++    + 
Sbjct: 248 ANMLKGLEHCIDSTIAYCKERKTFGTALIDNQVIHFRLAELASEIECLRALVYQATEQYI 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +        +A + K    ++A       ++  GG G++ +  +AR YR+    S
Sbjct: 308 NGQDVTR-------LASMAKLKAGRLARETTDSCLQYWGGMGFMWDNPVARAYRDVRLVS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +  L+
Sbjct: 361 IGAGADEIMLGIICKLM 377


>gi|315499040|ref|YP_004087844.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417052|gb|ADU13693.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 386

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 135/375 (36%), Gaps = 28/375 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHL 151
             D+ +  P    L R+    G+        +    +   AH I    +   +       
Sbjct: 36  EIDRTDQFPM--PLWRKMGDLGILGLTAPDMYGGAEMGYLAHTIAMEEISRASASVGLSY 93

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S    + +           + P++ + E+                L ++E   G+D+
Sbjct: 94  GAHSNLCVNQIVRNGNEAQKARYLPRLINGEH-------------VGALAMSEPGAGSDV 140

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++  + +K  +         W  + P +D  ++ A+     G   V   L +    G  
Sbjct: 141 MSMKLRAEKRGEHYVLNGSKMWITNGPDADVLVVYART--AEGSKGVTAFLIEKDFAGFS 198

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGM 328
             +  +K+G R + T EL F++        L+        +   +  +  ++S   +  M
Sbjct: 199 VAQKLDKLGMRGSHTGELVFADCEVPEENVLSTEGRGAAVLMSGLDYERVVLSGGPLGIM 258

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  L   I Y   R   G  +    +M+  IAD+     A  A  + +A + D  ++  +
Sbjct: 259 RACLNAVIPYVHERQQFGAPIGTFQLMQGKIADMYATWGACRAYVYAVAAACDRGETTRK 318

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +AA           +  + A  +  EA++C+GG+GY+ E    R +R++    I  G+  
Sbjct: 319 DAA-------ACILYAAEKATWMAGEAIQCLGGNGYVNEYPTGRLWRDAKLYEIGAGTSE 371

Query: 449 AMVLDVLNLLEKGTN 463
              + +   L + T 
Sbjct: 372 IRRMLIGRELFEETK 386


>gi|257057020|ref|YP_003134852.1| butyryl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586892|gb|ACU98025.1| butyryl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 385

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 139/376 (36%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AG 149
           GE +++ EF    + ++ R    GL    +   +  +         A           A 
Sbjct: 30  GEFYEREEFP---YEIVARMGEMGLFGLPFPEDYGGMGGDYFALCLALEELARVDSSVAI 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  +    T    ++W P +              +       GLTE  GG+
Sbjct: 87  TLEAGVSLGAMPIYRFGTEEQKREWLPALC-------------EGRALGAFGLTEPGGGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDG 265
           D +A  +      +G + ++G K F+++  +D    I +  V G+   G   +  ++   
Sbjct: 134 DASATRTTATLD-NGEWVVNGSKSFITNSGTDITRLITVTAVTGQKPDGGKEISAIIVPS 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
             +GL  Q   +K+G  ++ T  L F +        L     G  + + IL    +  A 
Sbjct: 193 GTSGLTVQPKYSKVGWNASDTHGLTFDDCRVPEGNLLGERGRGYAQFLSILDEGRVAIAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +SV   +  + E + Y + R   G  + +   ++  IAD+ L    A    ++ A     
Sbjct: 253 LSVGLAQGCVDECLRYVKEREAFGRKIGEYQSIQFKIADMELRTHTARLAYYQAAAKMLR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +EAA A++ A          A     +A +  GG G++ E  + R YR++    I
Sbjct: 313 GERFKKEAAIAKLAASNA-------AMDNARDATQIFGGYGFMNEYPVGRFYRDAKILEI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTSEVQRMLIAREL 381


>gi|218296043|ref|ZP_03496812.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243420|gb|EED09949.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 372

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 137/378 (36%), Gaps = 35/378 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P W  L       G        ++  V       + A      A    
Sbjct: 24  PLAPEYDRTGQYP-WPQLKALG-ELGFLGMTTPEAWGGVGLDSVTWVLALEEIAAADPSV 81

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++S +      + L   T    + +               P+ K        LTE + 
Sbjct: 82  AVIVSVTSGLPQYMLLRFGTEAQKRRYL-------------VPLAKGEWIGAFCLTEPQA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ ++ +++  G        W  S+  +  ++++A+ E       +   L +   
Sbjct: 129 GSDAKSLRAEARRVPGGFVLNGVKSWITSAGQAHLYVVMARTE-----KGISAFLVEKGT 183

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL +   + K+G  +  T E+     F      L      +     L  LDS  + V+ 
Sbjct: 184 PGLSFGPPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYA--LAGLDSGRVGVAA 241

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A      A  YA +R   G  L +   +   IAD+ + + AA AL+ R A   D 
Sbjct: 242 QAVGIARGAYEIAKAYADQREQFGKKLREHQAIAFKIADMHVSLEAARALTLRAAEKKDR 301

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + E       A   K +  ++A  V  EA++ +GG GY  +  + R+YR++    I
Sbjct: 302 GERFTLE-------ASAAKLFASRVAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEI 354

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   L +
Sbjct: 355 YEGTSEIQRLVIARELYR 372


>gi|154244575|ref|YP_001415533.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158660|gb|ABS65876.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 585

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 89/487 (18%), Positives = 169/487 (34%), Gaps = 59/487 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLR 108
               E +   +     +E  + A      L      G+          V          R
Sbjct: 28  LPGFEEVNAELAVSVLEEAGKFA---AGVLEPLNRPGDEEGCTLENGLVTTPKGVADAYR 84

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G      +  +      +  +I    +   A L  G     +  +   +    + 
Sbjct: 85  AFADAGWCSLSGNPEYGGQGLPRVLQILLDEMLSSANLSFGLFPGLTRGAVEAIGHHASA 144

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            +   + PK+ S E+                + LTE   GTD+  + ++     DG Y +
Sbjct: 145 ELKATYLPKMISGEW-------------TGAMALTEASAGTDLGLLNTRAVPNGDGSYAI 191

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           +G K F+SS   D       ++LA++         +  FL P+ L       G+ NG+  
Sbjct: 192 TGTKIFISSGDQDFGGNVIHLVLARLPDAPKGVKGISLFLAPKFLVHADGSLGARNGVNV 251

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             L++K+G  +  T  + +    G+L+G+       +  M     L   I  +     + 
Sbjct: 252 GALEHKMGIHAQPTCVMNYDGATGWLVGEPGRGLNAMFTMMNAERLFVGIQGLGIAEAAN 311

Query: 333 AEAIHYARRRHVS----GGI----LIDQPVMKRAIADIALDIA------AATALSFRLAN 378
            +A+ YAR R       G      +I+ P +++ +                TAL   +A+
Sbjct: 312 QKAVAYARERLQGHGADGTPGPVAIINHPDVRKMLLTGRAFADAARALAVWTALQMDIAD 371

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +A  R E  A   ++ P+ K             + + +GG GYI E  + +  R++ 
Sbjct: 372 RHPDATVRREADALVALLTPVVKAAFTDFGFETAVASQQVLGGHGYIREWGMEQFVRDAR 431

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              I  G+     LD++   L  +G  L ++ F  ++ DL ++       L   ++    
Sbjct: 432 IAQIYEGTNGVQALDLVGRKLGLEGGKLPQRFFDLIKADLDAALPSAGAALVTPVA---- 487

Query: 497 DKGLARF 503
            + LAR 
Sbjct: 488 -EALARL 493


>gi|313829293|gb|EFS67007.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA2]
          Length = 382

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|331699871|ref|YP_004336110.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326954560|gb|AEA28257.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 382

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 126/376 (33%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GE +++ EF    + L+ +    GL     D     +         A             
Sbjct: 29  GEFYEREEFP---YELVAKMGRMGLFGLPVDEDLGGMGGDYTALCIALEELGRVDSSVAI 85

Query: 151 LMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   V+   M +    T      W P + +              +     GLTE  GG+
Sbjct: 86  TLEAGVSLGLMPIYRFGTDEQKARWLPDLVAG-------------TKLGAFGLTEPGGGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLEDG 265
           D  A  +  +   D  + ++G K F+++  +D      + A   E   G   +  ++   
Sbjct: 133 DAGATRTTARLDGDE-WVINGSKSFITNSGTDVTSLVTVTAITGEREGGKKEISAIIVPS 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G       +K+G  ++ T EL F +        L     G  + + IL    +  A 
Sbjct: 192 GTPGFTVAPKYSKVGWNASDTHELSFDDCRVPAGNLLGERGRGYAQFLSILDEGRVAIAA 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +     +  + E++ YA  R   G  +     ++  IA++      +    +  A     
Sbjct: 252 LGTGLAQGCVDESVRYAHEREAFGQPIGSYQAIQFKIAEMESRAHTSRLAWYAAAAKMQA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K   +EAA       I K      A     +A +  GG G++ E  + R YR++    I
Sbjct: 312 GKPFKKEAA-------IAKLVSSNAAMDNARDATQIFGGYGFMNEFPVGRFYRDAKILEI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 365 GEGTSEVQKMLIARQL 380


>gi|84623614|ref|YP_450986.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84367554|dbj|BAE68712.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 393

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 150/397 (37%), Gaps = 42/397 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 23  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVDYGGA 73

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 74  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 130

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 131 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVL 180

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++   +L     V 
Sbjct: 181 FAVTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVL 237

Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
               E  +  +  LD+  + ++   V +A A +     Y + R   G  +    + +  I
Sbjct: 238 GVEGEGFRTAMSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKI 297

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L+ R A    + ++   EAA A++ A        + A  +  +A++  
Sbjct: 298 ADMKCKLDAALLLTLRAAWLKGQRQTFGTEAAVAKLTA-------SEAAMWITHQAVQIH 350

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY +E  + R++R++    I  G+     L +  
Sbjct: 351 GGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 387


>gi|332528789|ref|ZP_08404766.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332041855|gb|EGI78204.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 602

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 94/486 (19%), Positives = 182/486 (37%), Gaps = 72/486 (14%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDK 96
           L  L            E  G        +E A+        L      G+      +   
Sbjct: 14  LRHLARIDEIASLPGFEDAGFETAQAVLEEAAKFNEQVVAPL---NRAGDVQPSSWKDGT 70

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P +    R+    G         F      +A  I AA + ++        + P +
Sbjct: 71  VTTTPGFKDAFRQFAQGGWQGLQHPVDFGGQGLPKA--IGAACIEMVNSANLSFALCPLL 128

Query: 157 TSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           T  ++ AL+T  +  +   +  K+ S E+  T             + LTE + G+D+A +
Sbjct: 129 TDGAIEALLTAGSDELKAIYLEKLVSGEWTGT-------------MNLTEPQAGSDLALV 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
            S+ +   DG Y + G K F++    D       ++LA+V G       +  FLVP+ L 
Sbjct: 176 RSRAEPQPDGSYKVYGTKIFITYGEHDMADNIAHLVLARVTGAPEGIKGISLFLVPKFLV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN-------------TFGFLLGDLNVS 305
           +     G  N +    +++K+G +++ T  L++ +               G+L+G  N  
Sbjct: 236 NPDGSLGKRNDVQCVSIEHKMGIKASPTAVLQYGDGMVASIASSTGPGAVGYLVGQENRG 295

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMK 356
              +  M         +  ++    +  +A+ YA+ R  S            +I  P ++
Sbjct: 296 LEYMFIMMNAARYAVGVQGIAVAERAYQQAVAYAKDRVQSRPVDGSIKASAAIIHHPDVR 355

Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           R +      I    A++   A ++D      +A++R +   +   + P+ K +  +M+  
Sbjct: 356 RMLMTSRALIEGCRAMASVAAAAYDAAHHHTDAEARKQNQTFYEFLVPLVKGYSTEMSLE 415

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQL 468
           V +  ++  GG G+IEE   A+HYR++   +I  G+       L     L  G    + +
Sbjct: 416 VTSLGVQVHGGMGFIEETGAAQHYRDAKILTIYEGTTAIQANDLVGRKTLRDGGQTAKAI 475

Query: 469 FSTLEQ 474
            + +E 
Sbjct: 476 AAQVEA 481


>gi|311899801|dbj|BAJ32209.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 382

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 136/376 (36%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +WD+ E       ++ +    G         +        H      L  + + ++
Sbjct: 26  PFAAQWDRAESIDLG--VVGKLGDLGFLGLTLPEEYGGSGGD--HLAYCLVLEELGRGDS 81

Query: 149 GHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 SV+    A  V    T    + W P++ + E                   LTE 
Sbjct: 82  SVRGVVSVSLGLVAKSVNAFGTEAQKRAWLPRLCAGE-------------ALGCFALTEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D A +T++ ++  DG        +  +   +D  ++ A+  G  G   V   L   
Sbjct: 129 GTGSDAANLTTRAERDGDGWLLSGTKMFITNGTWADVALVFART-GGPGHRGVTAFLVPT 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAI 322
              G   + +  K+G R  AT EL            L    G        +    +  A 
Sbjct: 188 DAPGFERRLVHGKLGLRGQATAELVLDRVRVPDGARLGAEGGGFAVAMAALAKGRMSVAA 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   + SL  A+ YA  R   G  +    +++  +ADIA+D+ AA  L++R+A+  D 
Sbjct: 248 GCVGIAQASLDAAVRYAGEREQFGKPIAAHQLVQELLADIAVDVDAARLLTWRVADLIDR 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + E+        + K +  + A      A++  GG G+I+E  + ++ R++   ++
Sbjct: 308 GLPFAAES-------SVAKLFASEAAVRCANNALQVFGGYGFIDEYPVGKYLRDARVMTL 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 361 YEGTSQIHKLLIGRAL 376


>gi|291297090|ref|YP_003508488.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290472049|gb|ADD29468.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 592

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 88/530 (16%), Positives = 175/530 (33%), Gaps = 69/530 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW---DKVE 98
           LL  ++        +                  R+A  +    +      E W   ++V 
Sbjct: 13  LLYEVLEVEALTQRERYRDHSRETFKDILDVAYRIALEHFATHNKKNDQEEPWFDGERVH 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            +P   A L      GL  +  D +   +            L+  A +        +  +
Sbjct: 73  TNPEIKAALEAYRQAGLFAATHDYALGGIQLPYVIATAYGALFKAANIATASFALLTAGN 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+++    +P   K +               P  +      + L+E   G+ +  + ++ 
Sbjct: 133 ANLLRKYGSPAQQKKYL-------------LPQLEGRFFGTMCLSEPHAGSSLTDLLTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--- 264
           +  +DG Y L+G K ++S    +       ++LA++ G       +  F+VP+ L     
Sbjct: 180 EPQADGTYRLNGSKMWISGGDHEIAENIVHLVLAKIPGGPPGVKGISLFIVPKYLVHEDG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  NG+    L +K+G R      L   +  G L+G  +     +  M     +   +
Sbjct: 240 RLGPRNGVRVAGLNHKMGYRGIPNCLLSLEDAVGELVGAPHQGLSYMFTMMNEARIGVGM 299

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATA 371
            +++        A+ YA+ R                 +I  P ++R +            
Sbjct: 300 GAMALAYTGYLHALEYAQTRTQGRRLHDKNPASPAVPIIQHPDVRRMLIMQKAYAEGCLH 359

Query: 372 LSFRLANSFDEAK--SRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L    A   DE +     E A  AR    ++ P+ K W  ++       A++  GG GY 
Sbjct: 360 LCLYAARLVDEERTAPTPEAAEQARLLLEVLTPVVKAWSSELGMRANELAIQVHGGYGYT 419

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
            + ++ + YR++  N+I  G+     LD+             L   +    G   +    
Sbjct: 420 RDYNVEQFYRDNRLNAIHEGTNGIQALDL-------------LARKVGMQRGQGFRLWAQ 466

Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAA------ALYRAGMNDIADVF 529
            +  +I   ++ + L R   E +  A           L +A    +   F
Sbjct: 467 EVERTIQASRDTEAL-RPYAEALEQALQTTTEVTQHLLNKAAQGAVERAF 515


>gi|217968850|ref|YP_002354084.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506177|gb|ACK53188.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 378

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 138/402 (34%), Gaps = 28/402 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +E+  +A     +     P   + D  +  P    + +R+   GL       
Sbjct: 2   DFQLNPEQREIRDLARRFAER--EIAPRAAQADLDKAFPT--EVHQRAQELGLLGINLPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +           +     +    L  G  +  +  +   + +  T      +        
Sbjct: 58  TVGGGGLGCLELVLVTEAFCRGCLGIGTALCVNALATEPIVIAGTDAQRSRYL------- 110

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              +TE   G+D+A I ++ +++  G        W  ++ +++ 
Sbjct: 111 -------GAAARGALASFAMTEPGAGSDVAGIRTRAERVEGGYRLTGSKIWISNANLAEF 163

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+     G   +   +   +  GL       K+G R + T E+     F      L
Sbjct: 164 CVVFAKTAPDGGHRGMSAFIVPRASAGLTVGEPLGKLGQRCSPTCEVFLDQVFVPEDHRL 223

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M +        A   V  +   L E++ YA +R   G  LID   +   +
Sbjct: 224 GEEGGGFALAMAVFDHSRPMVAAFGVGLIERCLDESLAYATQRSSMGKRLIDHQAVAHKL 283

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++ + + AA  L+++ A   D+ +  + E       A I K +    A     EA++  
Sbjct: 284 AEMRMKLEAARLLTYQSAWLLDQGRPNTIE-------ASIAKAFAADAAMWAATEAVQIF 336

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GG GY  E  + + +R++    I  G+       +   L++ 
Sbjct: 337 GGMGYSTEYPVEKLFRDAKVLQIYEGTSEIQRNIIARELQRA 378


>gi|317124478|ref|YP_004098590.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315588566|gb|ADU47863.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 381

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             + + +   G         +        ++  A      A+          + +     
Sbjct: 40  RDIWQEAGKQGFFGFDIPEEYGGAGVDD-YRFNAVVAEEWARFNMATSSCFGIHADVCPP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            V  + T    + W P I S E             + I + +TE  GG+D+AA+ +   +
Sbjct: 99  YVVDLGTDEQKQRWLPGIASGE-------------LIIAIAMTEPSGGSDLAALKTTAVR 145

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  + L+G K F+++   +D  I+ A+ +   G   +   + +   +G    R  +K+
Sbjct: 146 DGDD-WVLNGSKTFITNGYQADLVIVAARTDASKGAKGITLFMVERGMDGFVNGRKLDKV 204

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G   + T EL F N        L  +  G +  M+ L    + SA+ + +  +  L E I
Sbjct: 205 GMDESDTAELFFDNVRVPDENRLGEADLGFIAMMQRLPQERVGSAVANTAHAKAILEETI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +      K  IA++   I    A       +  + +  + +AA A+  
Sbjct: 265 QYAKDRKAFGQSIGTFQHNKFLIAELVTKIEVTEAYVDDCVLAHSKKELTAIDAAKAKW- 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 W  ++   V+   ++  GG G++ E  +AR +R++    I  GS   M   +  
Sbjct: 324 ------WSSQVQNDVLDSCVQLHGGYGFMNEYRVARAWRDARVTKIWAGSNEIMKELIGR 377

Query: 457 LL 458
            L
Sbjct: 378 DL 379


>gi|297690735|ref|XP_002822764.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           1 [Pongo abelii]
          Length = 441

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 130/360 (36%), Gaps = 27/360 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R++   G                +                 
Sbjct: 61  PNMAEWDQKELFPV--DVMRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTST 118

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+           + P + + E                   LTE   G
Sbjct: 119 TAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTME-------------KFASYCLTEPGSG 165

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  +K  D  Y LSG K F+S    SD ++++ +  G  G   +  ++ +   
Sbjct: 166 SDAASLLTSAKKQGDH-YILSGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGT 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   +     G +  +K      ++ A  S
Sbjct: 224 PGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVKGLNGGRINIASCS 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+     +   R   G  L     ++  +AD+A  + AA  +    A +     
Sbjct: 284 LGAAHASVILTRDHLNVRKQFGEPLASNQYLQFKLADMATRLVAARLMIRNAAVAL---- 339

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 340 --QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 397


>gi|206588139|emb|CAQ18715.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 3162

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 132/395 (33%), Gaps = 43/395 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               + AR   A    P    +   G   D V           +    GL   I    + 
Sbjct: 10  RMILDAARDFAAERLAPHAAQWDRDGSLPDDVV---------AQMGELGLLGMIVPLEWG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                      A             +MS   +      L   T      + P + +    
Sbjct: 61  GSYTDYVAYALALEEIAAGCAACATMMSVHNSVGCGPILKFGTDAQRARYLPDLATG--- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF- 243
                            LTE + G++   + ++   + DG + L+G K F+++       
Sbjct: 118 ----------RAIGAFCLTEPQAGSEANNLRTRAV-LRDGRWVLNGSKQFVTNGTRAKLA 166

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R ++K+G R++ T  +   +         N
Sbjct: 167 IVFAVTDPGAGKRGLSAFIVPTDTRGFHVGRPEHKLGIRASDTCPITLEDCAVP---QAN 223

Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKR 357
           +   P E +KI L  L+   + ++   V +       A  YA  R   G  L +   +  
Sbjct: 224 LLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALREHQTIAN 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L    A      K    E       A   K +  ++A  + ++A++
Sbjct: 284 MLADMATRLNAARLLVHHAARLRSLDKPCLSE-------ASQAKLYASELAEEICSKAIQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             GG GY+ + ++ RHYR++    I  G+     +
Sbjct: 337 IHGGYGYLADYAVERHYRDARITQIYEGTSEVQRM 371


>gi|330822780|ref|YP_004386083.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|329308152|gb|AEB82567.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 384

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 130/376 (34%), Gaps = 35/376 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V FH  W         + R++  +GL  ++    +        H                
Sbjct: 30  VPFHAQWERDGIVPKEVWRKAGREGLLNTMLPEPYGG-GGDFGHAAILIEEVARTGASGL 88

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    +      W P++ + E             +   + +TE   G+
Sbjct: 89  GFPLHSDIVAPYIHAYGSTGQKDRWLPRMAAGE-------------LIGAIAMTEPGAGS 135

Query: 210 DIAAITSQGQKISD---GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
           D+ ++ +  + + D     Y L+G K F+++ + S+  I++A+    +G   V  ++ + 
Sbjct: 136 DLKSVRTTARLVKDSEGDHYILNGSKTFITNGINSEIVIVVAKTNPELGAKGVSLIVVEE 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   KIG  +  T EL F N     G LLG+ N+    +        L  A+
Sbjct: 196 GTPGFSKGRKLEKIGLMAQDTSELFFDNVKVPVGNLLGEENMGFKYLMKELAQERLVVAV 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + + +   L + + Y R R   G  + +    +  +A+                    +
Sbjct: 256 RAAASIEAFLQKTVDYTRERKAFGQTVFEFQNTRFKLAEAKAQATMLRVFVDDCMRLHMQ 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   E AA         K     +   ++ E ++  GG GY+ E  + R + ++    I
Sbjct: 316 RQLTPERAAM-------VKLNATALQNRLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   L
Sbjct: 369 YGGSDEIMKEIIARTL 384


>gi|315110486|gb|EFT82462.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA2]
          Length = 382

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                  +  G         +                       +  ++S +      + 
Sbjct: 39  QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASSSTVISSNELGTVPLL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K +  ++ S                  G  L+E   G+D AA+  +  +  D
Sbjct: 99  KYGSEEQRKRYLSEVASG-------------KALFGYALSEADAGSDPAALKCRADEDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   +  +   ++ A  +       +  L+      G+ Y   ++K+G R 
Sbjct: 146 SFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDPGISYGAPEHKMGIRG 205

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+ F NT       +      +     L  LD++ +S++   V +A+     A  Y
Sbjct: 206 SVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQAVGIAQGALDIATDY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +  ++++ +Y      
Sbjct: 264 VQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRSGRQTDDVSY---FGA 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +    A AV  +A++ +GG GY ++ ++ R +R++    I  G+     + +   L
Sbjct: 318 AAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIYEGTNQIQRIVIARQL 377


>gi|86159445|ref|YP_466230.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775956|gb|ABC82793.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 559

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/507 (22%), Positives = 198/507 (39%), Gaps = 43/507 (8%)

Query: 27  QPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANY-N 80
           Q P  +   A+ +D LL   +A        S +  EL  LG       A +  ++A    
Sbjct: 6   QDPPVLPH-AFDADPLLQEYLARTLPPDVLSAISPELRELGALASGPLAAQ--QLAERLV 62

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P L  + P G R D++E  P W    R +   GL  + ++R   P  R      + A +
Sbjct: 63  EPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERRHGPHSR----VHQLAMV 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL+      +    ++T  +   L+       D AP+       P   +         G 
Sbjct: 119 YLLEPSMDVYACPLAMTDGAARTLL-------DLAPRALVERAVPRLTSRDPARMWTSGQ 171

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVG 254
            +TE+ GG+D++   +  ++  +    L G KWF S+  ++  + LA+ EG       + 
Sbjct: 172 WMTERAGGSDVSGTETVARRDGEAF-RLWGTKWFSSATTAEMALALARPEGNPPGSAGLA 230

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
            F +     DG+ NG+   RLK+K+G R   T EL         +   +     +  M  
Sbjct: 231 LFYLETRGPDGASNGILVNRLKDKLGTRKLPTAELTLEGALAQPVAGTSGGVRAITPMLN 290

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +    +A+++ + M  ++A A  YA RR   G  L  +P+    +A +  +  A   L+F
Sbjct: 291 VTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAGLEAEREAGFLLAF 350

Query: 375 RLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           R        +  ++     A  R + P+ K    K A AV ++A+E  GG+GY+E+  + 
Sbjct: 351 RAVELLGRAEAGEADPGARALLRAVTPLAKLTTGKQAVAVASDAVEAFGGAGYVEDTGLP 410

Query: 432 RHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVIT--- 485
           R  R++    I  G+ N + L+             L  ++   L Q    S +  +    
Sbjct: 411 RLLRDAQVLPIWEGTTNVLALEAQRALAAEGAAEALAAEIQERLSQARDPSLRPAVQAAT 470

Query: 486 -------ILRDSISLCKEDKGLARFLT 505
                           +  +  AR L 
Sbjct: 471 GALARARAALAGGDAPELREAGARRLA 497


>gi|33603725|ref|NP_891285.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577850|emb|CAE35115.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 384

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 127/395 (32%), Gaps = 26/395 (6%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             Q+L R             P     D    +P  H +       GL    +   +    
Sbjct: 14  QIQDLIRRVAR-----ERVAPRANDIDSTAEYP--HDMFALLKELGLFTLPFPEQYGGAG 66

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              +  +       +    A  L+   V     +    T        P + S        
Sbjct: 67  SMLSACLAIEEFGRVCYNTAYLLLVQWVPFG-AILHGGTEEQKARLLPGLASG------- 118

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  +      TE + G+D++ I ++ +K   G        W  +S ++D  ++ A+
Sbjct: 119 ------DLRGAFSTTEAQSGSDVSGIKTRAEKTDGGFVLNGAKIWCTNSDIADFILVAAK 172

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
                    +   + +    GL   R + K+G R   +  L   N F      L      
Sbjct: 173 -YREHDKDGISLFIVERGAPGLQVGRKEEKMGARGVPSCPLFLDNVFVPEANMLGGGFKA 231

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V +             V   + +L  AI +   R   G  + D   ++  +AD+A+   A
Sbjct: 232 VMEAFNASRPLIGARGVGLAQGALDHAIEFVTNRAAFGQQVSDFQGVRWMLADMAIQTEA 291

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A+  D     +        +A + K +    A  V  +A++  G +G   E 
Sbjct: 292 ARHLVYRAASLVDSGAPAA----ALAPVAAMAKCFASDTAMKVATDAVQLFGAAGISSEY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            I R++R++    I+ G+       + N L    N
Sbjct: 348 PINRYFRDAKVLQIIEGTNQIQRNIISNSLLGRPN 382


>gi|300784058|ref|YP_003764349.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793572|gb|ADJ43947.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 378

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 137/378 (36%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  PA   +  ++   GL        +  +    A  +R A          
Sbjct: 23  PREAEIDERDEIPA--EIREKAAELGLFGWALPEEYGGLGLGMAEDVRLAIELGWTTPAF 80

Query: 149 GHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L  + +  +   +    TP     W P++                       LTE   
Sbjct: 81  RSLFGTNNGIAGQAIVHHGTPDQRTRWLPRL-------------AAGQAIASFALTEAEA 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D   +TS+  +  D        ++  ++P+++ F+  A+ +    G   +   L    
Sbjct: 128 GSDPGGLTSRAVRDGDRYRLSGTKRFITNAPLAEVFVAFARTDPESTGSHGISAFLVPAG 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+       K+G     T E+ F +       L+G+     G          L  A +
Sbjct: 188 APGVTVGPHDAKMGQAGAWTSEVVFDDVELAADTLVGEEGKGFGIAMASLARGRLHIAAL 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V     +LAEA+ YAR     G ++ +  +++  +A+   ++AA  A+    A  +D  
Sbjct: 248 CVGLAERALAEAVEYARTARQGGRVIGEYQLVQALLAESHAELAAGRAMVHEAAAKYDSG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R       ++     K +C +M   V   A++  GG+GY+   ++ R YR++    I 
Sbjct: 308 EDR-------KLGPSSAKLFCTEMLGRVADRAVQVHGGTGYVRGVTVERIYRDARLFRIY 360

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+     L +   L KG
Sbjct: 361 EGTSEIQKLVIARQLLKG 378


>gi|226303698|ref|YP_002763656.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226182813|dbj|BAH30917.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 383

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 137/419 (32%), Gaps = 43/419 (10%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
           +    PS    E+  + E       +EL   A         +     R D+      W  
Sbjct: 2   VTKRKPSWHDDEITAVAELARGFFDRELI--AKR-----EQWDAQ-HRVDR----SVWLE 49

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
               +   GL C      +       AH +            A      S   A  V   
Sbjct: 50  ----AGKLGLLCCSIPEEYGGGGGTFAHDLAVFEAQGYCGDYALGNSVHSGIVAHYVLEY 105

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    K W P + + E             +   +G+TE   G+D+ AIT+   +  D  
Sbjct: 106 GSEEQKKAWLPGMATGE-------------ILGAIGMTEPGTGSDLKAITTSATRDGDH- 151

Query: 226 YCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRS 283
           Y ++G K F+++  S   I LA + + + G   V  L+ D     G    R+ +K+G   
Sbjct: 152 YVVNGSKTFITNGGSADMIALAVKTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHG 211

Query: 284 NATVELEFSNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL F++    +         +  G +    +   L     ++  +  ++ E + Y 
Sbjct: 212 ADTSELSFTDVRVPVSNLLGESEGLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYT 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L +       +A+                   D               A +
Sbjct: 272 KARQAFGHNLFEFQNTAFELAECQTIARTCRVF-------LDNCIEDHLNGELDGADAAM 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            KYW  +   AV+   ++  GG GY+ E  IAR Y +S    I  G+   M   +   L
Sbjct: 325 VKYWLTEQQCAVVDRCVQLYGGYGYMREYPIARMYEDSRVQKIYAGANEVMKGIIAKSL 383


>gi|114563909|ref|YP_751423.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114335202|gb|ABI72584.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 596

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 95/552 (17%), Positives = 193/552 (34%), Gaps = 75/552 (13%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
                       +L  L+  +     +  + +   +     Q +   A+++T  +     
Sbjct: 7   PLRDYQF-----ILSELLNVYKQTDLRGFDEIDADLTDAILQGV---ADFSTDIMLPLNA 58

Query: 90  GGER-----WDKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            G+       D     P  +    ++ + DG      D  F      +     A  +   
Sbjct: 59  SGDLEGCKLVDGKVITPIGFKQAYKQYVQDGWATLTCDPEFGGQGLPEVIGTFATEMKTA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             +        +  + S + +  +  + + +  K+ S E+  T             + LT
Sbjct: 119 TNMAFAMYPGLTHGAYSAIHVHGSDALKQKYLAKLVSGEWTGT-------------MNLT 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           E   GTD+A + ++     D ++ +SG K F+SS   D       ++LA++         
Sbjct: 166 ESHAGTDLALLRTKAVPAGDDVFAISGEKIFISSGDHDLADNIIHLVLARLPDAPEGVKG 225

Query: 253 VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  F VP+ L +     G  N L    L++K+G   N+T  + F    G L+G  +    
Sbjct: 226 ISLFAVPKFLVNADGSLGEANKLSATGLEHKMGIHGNSTCVMHFDGAIGELVGAAHQGLK 285

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVM 355
            +  M     L   I  +    ++   A+ YA+ R              +   L+    +
Sbjct: 286 AMFTMMNQARLGVGIQGLGVSDIAYQNALVYAKERIQGRALSGVKQPEQAADSLLVHGDV 345

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAP 409
           +R +           AL  + A   D+ +  ++        A A +  PI K +      
Sbjct: 346 RRMLLSQKSFNEGTRALMGQQALWLDQVERHTDPEKAKQANALAALFTPIVKGFVTDQGF 405

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE 466
               +A +  GG GYI E  + +  R+     I  G+     LD++    L +KG  L  
Sbjct: 406 KACVDAQQIYGGHGYINEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKLLADKGAALTL 465

Query: 467 ---QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE------KIALASSAAAL 517
               +   ++Q++G+   K    L   +    + +    F+ +       +  A+S A +
Sbjct: 466 WSVMVKELIQQNVGNDAMK--PYLAGLMDAAGDLEKATGFIVQSASKNPDLIGAASMAYM 523

Query: 518 YRAGMNDIADVF 529
              G+  +A ++
Sbjct: 524 QLFGITALAWMW 535


>gi|296165235|ref|ZP_06847782.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899424|gb|EFG78883.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 399

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 86/409 (21%), Positives = 150/409 (36%), Gaps = 38/409 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
               E   L +   S   +E+A       P+L         W+ V   P    L   +  
Sbjct: 24  WTTPERRALSQMARSFVEREIA-------PKL-------AEWEHVGEIP--RDLHLNAAE 67

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL    +                A    L+ +       S  V +A     +  P +  
Sbjct: 68  VGLLGIGFPEEVGGSGG------NAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAA 121

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + +  +  R   PT         +   LG+TE   G+D+A + ++  +  D  Y ++G K
Sbjct: 122 NGSDALIERYVRPTL-----AGKMIGSLGVTEPGAGSDVANLRTRAVRDGD-TYVVNGAK 175

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            F++S +   F+  A   G  G   V  L+ D +  G    R  +K+G R + T EL F 
Sbjct: 176 TFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFV 235

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A+ + +    +L  A  +AR R   G  L
Sbjct: 236 DVRVPAENLVGAANSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPL 295

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             + V++  +A++A  +  A   +  +   +   +    E + A+  A     +      
Sbjct: 296 TGRQVIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDY------ 349

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V+ EA++  GG GY+ E  I RHYR+     I  G+   M   +   +
Sbjct: 350 -VVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEIIAKRI 397


>gi|169627170|ref|YP_001700819.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169239137|emb|CAM60165.1| Probable acyl-CoA dehydrogenase (FadE) [Mycobacterium abscessus]
          Length = 381

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 130/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             L   +   G         F        ++  A     +A+  A    S S+     A 
Sbjct: 40  RELWEEAGKQGYLGLDVPEEFGGSS-AGDYRYNAVLQEELARSSAALASSMSIHFDIVAP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  +TT    + W PK  S E                 +G+TE  GG+D+AA+ +   K
Sbjct: 99  YLVELTTDEQKQRWLPKFCSGEM-------------ITAIGMTEPSGGSDLAALKTTAVK 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         +  +   +D  ++ A+    +    +     +    G    R  +K+G
Sbjct: 146 DGDDWVINGSKTFITNGARADLVVVAARTAPELKAKGITLFAVEEGMPGFERGRKLDKVG 205

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                T EL F++       ++G++N     +        +  A+ +++     L E + 
Sbjct: 206 QPEADTAELFFTDVRVPAENVIGEVNQGFISMMQRLPQERMGCAVANIAHAVAVLEETVE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +      K  IA++   + AA     +   +  + +  + +AA A+   
Sbjct: 266 YAKERKAFGQQIGSLQYNKFLIAELVTKLEAAQVYVDQAVLAHSKGELTAIDAAKAKW-- 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W  ++   VI   ++  GG GY++E  +AR + ++    I  GS   M   +   
Sbjct: 324 -----WSSQVQNEVIDACVQLHGGYGYMKEYRVARAWMDARVTKIWAGSNEIMKELIGRD 378

Query: 458 L 458
           L
Sbjct: 379 L 379


>gi|15488707|gb|AAH13498.1| Acyl-Coenzyme A dehydrogenase, medium chain [Mus musculus]
          Length = 421

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 120/362 (33%), Gaps = 32/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++R+   GL  +    S   +                        +  +      V 
Sbjct: 75  FPLIKRAWELGLINAHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVI 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L    +  K +  ++              +  +     +TE   G+D+AAI ++ +K  D
Sbjct: 135 LAGNDQQKKKYLGRMT-------------EQPMMCAYCVTEPSAGSDVAAIKTKAEKKGD 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  +   ++ + +LA+                + +    G+   + +  +G
Sbjct: 182 EYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMG 241

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R + T  + F +         NV  G     KI +          A  +V   + +L E
Sbjct: 242 QRCSDTRGIAFEDVRVP---KENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +       
Sbjct: 299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNT------- 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K     +A  +  +A++  GG G+  E  + +  R++    I  G+     L +
Sbjct: 352 YYASIAKACAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLII 411

Query: 455 LN 456
             
Sbjct: 412 AR 413


>gi|326382764|ref|ZP_08204454.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198354|gb|EGD55538.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 396

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 126/383 (32%), Gaps = 33/383 (8%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   ++ +    GL   +    +  +                  +    +++
Sbjct: 34  QELEHSDTYPQEIVDQMAEMGLFGLMIPTEYGGLGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +A M++   T    + + P++ + E             V     ++E   G+D+AA
Sbjct: 94  THFITAYMISRHGTDEQKQRFLPRMATGE-------------VRGAFSMSEPELGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP---- 267
           I ++  +  DG        W  +   S     L + +         +   L +       
Sbjct: 141 IRTRAVREGDGYVIDGQKMWLTNGGTSTLVAALVKTDEGADKPHRNLTTFLVEKPAGFGE 200

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              G+      +K+G +   T EL F          L G      G + D   +  ++ A
Sbjct: 201 VVPGITIPGKIDKMGYKGIDTTELIFDGYRAAASDILGGTPGKGFGHMMDGVEVGRVNVA 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +      S   A  YA++R   G  ++D   +   +A++A  + AA  +    A   D
Sbjct: 261 ARACGVALRSFELAARYAQQRQTFGKPIVDHQAIAFKLAEMATKVEAAHLMMVNAARLKD 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                   A  A+ +A        +    V  E+    GG GY +E  I R  RE+P   
Sbjct: 321 SGDRNDVAAGMAKYLA-------SEYCAEVTQESFRIHGGYGYSKEYEIERLMREAPFLL 373

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+       +   + +   L
Sbjct: 374 IGEGTSEIQKTIISKGVLRSYGL 396


>gi|224370925|ref|YP_002605089.1| Acd12 [Desulfobacterium autotrophicum HRM2]
 gi|223693642|gb|ACN16925.1| Acd12 [Desulfobacterium autotrophicum HRM2]
          Length = 387

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 142/380 (37%), Gaps = 34/380 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + WD+  + P +   +      G + ++    +        A  I    +   
Sbjct: 22  KKITPNADAWDEANYFP-YKEAVLPMGELGFYGTVIPEEYGGEDMGWMAAMIVTEEIAKG 80

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +      +    +  A  +    T    K +  K+ + EY               G G+T
Sbjct: 81  SSSLRVQVNMQVLGCAYGIFKYGTEAAKKRYVEKLCTAEY-------------LGGFGIT 127

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-L 262
           E   G+D+ A+ +  +   D         W  ++ ++D  I  A  +  +G   +    +
Sbjct: 128 EADAGSDVMAMATTAEDKGDHYLLNGSKTWISNAAIADVLICYAYTDKEIGTKGLSAFVI 187

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------I 316
           E  +  G+    L+ K+G+ S+ T E+   N         N+   P +  KIL       
Sbjct: 188 EPKNFPGITTSALE-KLGSHSSPTGEVFLDNVKVP---KENLLGKPGDGAKILFGSLNHT 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L +A   V   +  L EAI Y   R   G  +    + +  IA +A +I AA  + +R 
Sbjct: 244 RLSAAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAARFMVYRA 303

Query: 377 ANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A   D+   +   + A A+ +A        ++A      AM  +G  GY  E  +AR YR
Sbjct: 304 AFEKDQGNINNGLDVAKAKYLAG-------EVATKASNFAMRILGAYGYSTEYPVARFYR 356

Query: 436 ESPANSILLGSGNAMVLDVL 455
           ++P  S++ GS N   + + 
Sbjct: 357 DAPTYSMVEGSANICKMIIA 376


>gi|2388724|gb|AAC31642.1| very-long-chain acyl-CoA dehydrogenase [Mus musculus]
          Length = 573

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 87/466 (18%), Positives = 173/466 (37%), Gaps = 56/466 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G            +        R A +  M  L     L +        + L  T   
Sbjct: 56  ELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQ 115

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P++ S                     LTE   G+D+A+I S       G  Y L+
Sbjct: 116 REKYLPRVASG-------------QALAAFCLTEPSSGSDVASIRSSAIPSPCGKYYTLN 162

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   +D F + A+   +          +   + + S  G+ +   + K+G ++
Sbjct: 163 GSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKA 222

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIH 337
           + T E+ F           NV     +  K+ +  L++    ++          +A+A+ 
Sbjct: 223 SNTSEVYFDGVKVPS---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVD 279

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +  V++  +A +A+      ++++ L+ + D+  K    EAA     
Sbjct: 280 HATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA----- 334

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +C + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V  
Sbjct: 335 --ISKIFCSEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFVAL 392

Query: 456 -NLLEKG------TNLFEQLFSTLEQDLGSSGKKVITI--LRDSISL-------CKEDKG 499
              ++KG       N  +  F  +   +G +GK++     +   +SL             
Sbjct: 393 QGCMDKGKELTGLGNALKNPFGNVGLLMGEAGKQLRRRTGIGSGLSLSGIVHPELSRSGE 452

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           LA    ++ A    A  L +     + + FL  R  D     + M+
Sbjct: 453 LAVQALDQFATVVEAK-LVKHKKGIVNEQFLLQRLADGAIDLYAMV 497


>gi|148555076|ref|YP_001262658.1| isovaleryl-CoA dehydrogenase [Sphingomonas wittichii RW1]
 gi|148500266|gb|ABQ68520.1| isovaleryl-CoA dehydrogenase [Sphingomonas wittichii RW1]
          Length = 381

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 139/375 (37%), Gaps = 28/375 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P   + D  ++ P    +       GLH    D +   +       + A      A 
Sbjct: 26  RIAPLAAKIDADDWFP--REIWPEMGALGLHGITVDEADGGLGLGYLEHVVAQEEVARAS 83

Query: 146 LEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              G    + S    + +    T      + PK+ S E+                L ++E
Sbjct: 84  ASIGLSYGAHSNLCVNQIRRWATAEQKARYLPKLISGEH-------------VGSLAMSE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ ++  +  +  D         W  ++  +D  ++ A+     G   +   L +
Sbjct: 131 AGAGSDVVSMKLRADRKGDRYILNGTKFWITNATYADTLVVYAKT--GEGSRGITTFLIE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    +  +K+G R + T EL F +        +    G V  +   +  +  +++
Sbjct: 189 KGFKGFSIGQKIDKVGMRGSPTAELVFDDCEVPEENVMGPVGGGVGVLMSGLDYERTVLA 248

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+  L   + Y R R   G  +    +M+  +AD+ + + +A A  + +A + D
Sbjct: 249 GIQLGIMQACLDTVLPYVRDRKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAKNCD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++   +AA A ++A        + A  V  EA++ +GG+GY ++  + R+ R++    
Sbjct: 309 AGRTTRFDAAGAILLA-------SENAVKVANEAVQALGGAGYTKDWPVERYMRDAKLLD 361

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+     + +  
Sbjct: 362 IGAGTNEIRRMLIGR 376


>gi|297670074|ref|XP_002813204.1| PREDICTED: acyl-CoA dehydrogenase family member 9,
           mitochondrial-like isoform 2 [Pongo abelii]
          Length = 498

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 152/414 (36%), Gaps = 54/414 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T      + PK+ S E+                  LTE   G+D A+I S+    
Sbjct: 30  IILAGTEEQKAKYLPKLASGEH-------------IAAFCLTEPASGSDAASIRSRATLS 76

Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRL 275
            D   Y L+G K W  +  ++  F + A+ E           +   + +    G+   + 
Sbjct: 77  EDKKHYILNGSKVWITNGGLASIFTVFAKTEVVDSDGSMKDKITAFIVERDFGGVTNGKP 136

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSL-- 332
           ++K+G R + T E+ F NT   +    N+     +  K+ +  L+S   S+  +   L  
Sbjct: 137 EDKLGIRGSNTCEVHFENTKVPV---ENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLK 193

Query: 333 ---AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                   YA  R      L +  +++   A +A       ++++  A   D+       
Sbjct: 194 RLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPD-- 251

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                I A + K +  + A   ++EA++ +GG GY  +    R  R++    I  G+   
Sbjct: 252 ---CSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTNEI 308

Query: 450 MVLDV-LNLLEKGTNLFEQLFSTLEQD-----LGSSGKKVITILRDSISLCKEDKGLARF 503
           + + + L  L+    +       ++Q      + ++G+++   L  ++ L     G    
Sbjct: 309 LRMYIALTGLQHAGRILTTRIHEIKQAKVSTVMDTNGRRLRDSLGQTVDLGLT--GNHGV 366

Query: 504 LTEKIALASS-------------AAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           +   +A +++                L R G   + +  +  R  +   + + M
Sbjct: 367 VHPSLADSANKFEENTYYFGRTVETLLLRFGKTIMEEQLVLKRVANILINLYGM 420


>gi|332835216|ref|XP_001151318.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 423

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 127/369 (34%), Gaps = 40/369 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     D  +          +                     T
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 144

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++    T      + P++               T       L+E   G+D  A+ +
Sbjct: 145 LINTLIRKHGTEEQKATYLPQLT--------------TEKVGSFCLSEAGAGSDSFALKT 190

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K  D         W  S+  +  F+++A V+  +G   +   L D    GL   + +
Sbjct: 191 RADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPE 250

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           NK+G R+++T  L F N       + N+        K  I  L+   + ++   + LA+ 
Sbjct: 251 NKLGLRASSTCPLTFENVKVP---EANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 307

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y + R   G  L D   ++  +A +A  +     +            SR +  
Sbjct: 308 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLELLQRIV---------GSSRVDLQ 358

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A   +   I       +A    ++ +E +GG GY ++  + +++R++   +I  G+ N  
Sbjct: 359 ASLLLDYSI-------IAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 411

Query: 451 VLDVLNLLE 459
           +  +   ++
Sbjct: 412 LNTIAKHID 420


>gi|256390554|ref|YP_003112118.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256356780|gb|ACU70277.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 385

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 134/376 (35%), Gaps = 33/376 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P       R    G+        +         K +A  +    +       
Sbjct: 31  EWERDGHPP--REFYHRLGELGVFGIEVPEEYGGAGLST-FKYQAIVIEETTRAGVTFGT 87

Query: 153 SPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +       +  L    T      W PK  S E                 + +TE   G+D
Sbjct: 88  TTVHVGLILPYLLAYATEEQKARWLPKFQSGEMM-------------TAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDG 265
           +A I +  +   DG  Y L+G K F++  + +D  +++A+            +  L  D 
Sbjct: 135 LAGIQTTAKLSEDGRHYVLNGAKTFITGGVLADMVLVVARTAPATPEDRRGGLSILCVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +KIG +++ T EL F++       LLG+       +        L  A+
Sbjct: 195 KAAGYSVGRKLDKIGLKTSDTAELAFTDVPVPVEDLLGEPGKGFSYLTHNLPQERLAIAV 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +    +L  A+ Y R R V G  +      K  +A+ A ++ AA  +  R     + 
Sbjct: 255 GGYASASAALQFALDYVRERTVFGTSVASFQNTKFVLAECATEVEAAQCMVDRALELHEA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA         K +C + A  VI + ++  GG GYI E  IAR Y ++  + I
Sbjct: 315 GELSVADAAK-------VKLFCTEAAGRVIDKCLQLHGGYGYITEFPIARLYADTRVSRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 368 YGGTSEVMKTIIAKSL 383


>gi|84516749|ref|ZP_01004107.1| isovaleryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509217|gb|EAQ05676.1| isovaleryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 382

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 139/379 (36%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P   + D+    PA  AL R     GL     D S+        AH +    +   +   
Sbjct: 26  PMAAQIDRDNLFPA--ALWREMGDLGLLGVTVDESYGGAGMTYLAHTVAIEEIARASASV 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +    + S    + + L  T      + P++ S ++                L ++E   
Sbjct: 84  SLSYGAHSNLCVNQIKLNGTEAQKAKYLPRLISGDH-------------VGALAMSEAGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + +K +D         W  + P +D  ++ A+ +   G   +   L +   
Sbjct: 131 GSDVVSMALRAEKRNDHYRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGITAFLIEKEM 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +K+G R + T EL F +       +LG        +        +  A + 
Sbjct: 191 TGFSTSPHFDKLGMRGSNTAELIFDDVAVPFENVLGAEGRGVAVLMSGLDYERVVLAGIG 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L E + Y   R   G  + +  +M+  IAD+   + +A A  + +A + D   
Sbjct: 251 LGIMAACLDEIMPYLASRKQFGQPIGNFQLMQGKIADMYTAMNSARAYVYAVAAACDRGT 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              ++AA           +  + A     +A++ +GG+G++ +  +AR +R++    I  
Sbjct: 311 VTRQDAA-------ACCLYASEEAMKQAHQAVQAMGGAGFLADAPVARLFRDAKLMEIGA 363

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     + V   L     
Sbjct: 364 GTSEIRRMLVGRELMGAMG 382


>gi|207725352|ref|YP_002255748.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206590588|emb|CAQ37550.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 594

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 86/438 (19%), Positives = 175/438 (39%), Gaps = 57/438 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         +      +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 86  QGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEA 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E+  T             + LTE + G+D+A + ++ + + DG + + 
Sbjct: 144 QKQRFVPRLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTFKIF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ L +     G+ N +   
Sbjct: 191 GTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVVPKFLVNDDGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L+F +     G L+G+ N     +  M         +  +     
Sbjct: 251 SIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSER 310

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YAR R  S            +I  P +KR +  +      A AL++  A + D
Sbjct: 311 AYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACD 370

Query: 382 EAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 ++AA  +  A      P+ K W  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 371 AGHHAGDDAARKQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL-----FSTLEQDLGSSGKKVITILRDS 490
           ++    I  G+      D++            L      + +E  L + G      +R  
Sbjct: 431 DARILPIYEGTTAIQANDLVGRKTVRDGGAVALGICVEIAKVEAQLAAKGGAHCDAMRAR 490

Query: 491 ISLCKED-KGLARFLTEK 507
           ++  +E    + RF+  +
Sbjct: 491 LAAGREAMDAVVRFVVAQ 508


>gi|195055316|ref|XP_001994565.1| GH15455 [Drosophila grimshawi]
 gi|193892328|gb|EDV91194.1| GH15455 [Drosophila grimshawi]
          Length = 336

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 137/355 (38%), Gaps = 30/355 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL   +    +                          LM  +     +V    T +  + 
Sbjct: 2   GLMSVVVSEEYGGAGLDYQAYAIGMEEVARGDAAVSVLMGVNNMYVGVVQQRGTDQQKQQ 61

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232
           +               P  +        L+E   G+D +A ++  +    G Y L+G K 
Sbjct: 62  FL-------------VPYTQGQHIAFYALSEPGSGSDASAASTTAKLNGSGDYLLNGTKA 108

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +S  +   ++ A ++  +    +  LL      GL   + +NK+G R+++T +L  +
Sbjct: 109 WISNSKEASGGLVFATIDKSLKHKGITALLTAKDVPGLTIAKRENKLGMRASSTCQLVLN 168

Query: 293 NTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSG 346
           +     +    V  G     +I +  LD   + ++     +A+A     + YA +R   G
Sbjct: 169 DV---AIPQSQVLGGAGHGFRIAMESLDCGRIGIAAQATGIAQAALELAVDYADKRVAFG 225

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+AL +  A  L++R A   D   S ++EAA A++ A  T  +C  
Sbjct: 226 QRLSRLQLIQQKLADMALRVETARLLTWRAAWLKDNGLSITKEAAMAKLHASETATFC-- 283

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
                  + ++ +GG GY  +     +YR +    I  G+     + + N + KG
Sbjct: 284 -----AHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANCIMKG 333


>gi|324503419|gb|ADY41489.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 366

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 121/366 (33%), Gaps = 32/366 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +++++   GL        +                           +     + + V 
Sbjct: 15  WDIVKKAHTLGLMNPQIPAKYGGAELSSLETALVVESLAYGCSAIQLCIMGPSLAVAPVL 74

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +                +    +     +TE   G+D+AAI ++ +K  D
Sbjct: 75  LAGNEEQKKKYL-------------GMLAAEPLIAAYCVTEPGAGSDVAAIKTKAEKKGD 121

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W      +  F +LA+ E              + DG   G+   + +  +G
Sbjct: 122 SYVINGPKAWITGGGYATWFFVLARTETDPKTPAGQAFTAFVVDGDTPGISRGKKELNMG 181

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            R + T  + F +    ++   NV   P    K+ +          A  +V     +L E
Sbjct: 182 QRCSDTRTITFEDV---VVPKENVLGAPGAGFKVAMGAFDTTRPGVAAGAVGLAWRALDE 238

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G  +     +   +AD+A+++  A  +++R A   D  +  S       
Sbjct: 239 ASKYALERKTFGVPISQHQGVSFLLADMAINLELARLVTYRAAVDVDNKERSS------- 291

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K +    A    A A++ +GG+G+  E  + +  R++    I  G+     + +
Sbjct: 292 YYASIAKCFAADTANITAANAVQILGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRVVI 351

Query: 455 LNLLEK 460
              L +
Sbjct: 352 SRHLLQ 357


>gi|254485501|ref|ZP_05098706.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101]
 gi|214042370|gb|EEB83008.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101]
          Length = 571

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 88/477 (18%), Positives = 171/477 (35%), Gaps = 42/477 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           + V+    +E  ++ N     L       P       V     +    +     G     
Sbjct: 34  DDVIRAILEEAGKLCNEVLAPLQRPGDLDPARLENGVVRTSNGYADGFKAIADGGWIGIS 93

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
            D  +  +    +       +   A L        S      +    +  +   + PK+ 
Sbjct: 94  ADPEYGGMGLPLSLASAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDAIKDLYLPKLI 153

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+  T             + LTE + G+D+ A+ S+ +   DG + +SG K ++S   
Sbjct: 154 SGEWTGT-------------MNLTEPQAGSDVGALASKAEDNGDGTFSISGQKIYISWGD 200

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
           +D       ++LA++ G       +  FLVP++L +     G  N L    L++K+G   
Sbjct: 201 NDFAENVCHLVLARLPGAPAGTKGISLFLVPKILPNDDGTLGKANSLKVVSLEHKMGLHG 260

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           + T  +++    G+L+G        +  M     L      +     +   A+ YA  R 
Sbjct: 261 SPTCVMQYDQATGWLVGPEQGGMAAMFTMMNNARLGVGEQGIGVAEGAYQHALAYALDRK 320

Query: 344 VSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--AYAR 394
                     G ++D   ++R +  +  D  AA A++   A + D   +  E    + A 
Sbjct: 321 QGKTSTADGTGSIVDHADVRRMLMTMKADTFAARAIALSCAVAIDMTNATGEADWKSRAA 380

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD- 453
            + PI K +      AV    ++  GG G IEE   A++ R+    +I  G+     +D 
Sbjct: 381 FLTPIAKAFGTDTGIAVSETGVQVHGGMGVIEETGAAQYCRDVRVTAIYEGTNGIQAMDL 440

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
           V   +  G +   +L   +E D  ++ +    +        +  +    +L  +  L
Sbjct: 441 VARKMMDGGDAAYRLLDEIEADAEAAREAFPNMADAVWQASETLREATEWLVSQTDL 497


>gi|108800147|ref|YP_640344.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869275|ref|YP_939227.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770566|gb|ABG09288.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695364|gb|ABL92437.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 399

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 85/409 (20%), Positives = 152/409 (37%), Gaps = 38/409 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
               E   L +   S + +E+A       P+L         W+ V   P    L   +  
Sbjct: 24  WTTPERRALSQMARSFSEREIA-------PKL-------AEWEHVGEIP--RDLHLNAAE 67

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL    +                A    L+ +       S  V +A     +  P +  
Sbjct: 68  VGLLRIGFPEEVGGSGG------NAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAA 121

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + +  +  R   PT         +   LG+TE   G+D+A + ++  +  D  Y ++G K
Sbjct: 122 NGSDALIQRYVRPTL-----AGKMIGSLGVTEPGAGSDVANLRTRAVREGD-TYVVNGAK 175

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            F++S +   F+  A   G  G   V  L+ D +  G    R  +K+G R + T EL F 
Sbjct: 176 TFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFV 235

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A+ + +    +L  A+ +AR R   G  L
Sbjct: 236 DVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPL 295

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             + +++  +A++A  +  A   +  +   +   +    E + A+  A     +      
Sbjct: 296 TGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDY------ 349

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V+ EA++  GG GY+ E  I RHYR+     I  G+   M   +   +
Sbjct: 350 -VVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 397


>gi|207743723|ref|YP_002260115.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206595122|emb|CAQ62049.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 594

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 86/438 (19%), Positives = 176/438 (40%), Gaps = 57/438 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         +      +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 86  QGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEA 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E+  T             + LTE + G+D+A + ++ + + DG + + 
Sbjct: 144 QKQRFVPRLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTFKIF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ L +     G+ N +   
Sbjct: 191 GTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVVPKFLVNDDGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L+F +     G L+G+ N     +  M         +  +     
Sbjct: 251 SIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSER 310

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YAR R  S            +I  P +KR +  +      A AL++  A + D
Sbjct: 311 AYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACD 370

Query: 382 EAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 ++AA  +  A      P+ K W  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 371 AGHHAGDDAARKQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDS 490
           ++    I  G+       L     +  G  +   + + +   E  L + G      +R  
Sbjct: 431 DARILPIYEGTTAIQANDLVGRKTVRDGGAVALGICAEIAKVEAQLAAKGGAHCDAMRAR 490

Query: 491 ISLCKED-KGLARFLTEK 507
           ++  +E    + RF+  +
Sbjct: 491 LAAGREAMDAVVRFVVAQ 508


>gi|47086807|ref|NP_997776.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Danio rerio]
 gi|32451670|gb|AAH54606.1| Acyl-Coenzyme A dehydrogenase, very long chain [Danio rerio]
          Length = 659

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 85/468 (18%), Positives = 171/468 (36%), Gaps = 60/468 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             G            V        R   +  M  L     L +        + L   P+ 
Sbjct: 143 EMGAFGLQVPADLGGVGLTNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGNPQQ 202

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + PK+ + E                   LTE   G+D A+I +   +   G  Y ++
Sbjct: 203 KEKYLPKLATGEN-------------IAAFCLTEPASGSDAASIKTTAVRSPCGQYYTMN 249

Query: 230 GHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G K ++S+   ++ F + A+        G +    +   + + S  G+     + K+G +
Sbjct: 250 GSKIWISNGGTAEIFTVFAKTPVKDEKTGEMKDK-ITAFIVERSFGGVSSGPPEKKMGIK 308

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIH 337
           ++ T E+ F N        L    G  +    +  L++    ++      M+  + +A+ 
Sbjct: 309 ASNTAEVYFENVRVPADCVLGEVGGGFKVAMNI--LNNGRFGMAAALSGTMKGVITKAVD 366

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A  R   G  + +   ++  +A +A+      ++++ ++ + D        A   +I A
Sbjct: 367 HAANRTQFGNKIHNYGAIQEKMARMAMLQYVTESMAYMVSGNMDSG------ATEFQIEA 420

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LN 456
            I+K +  + A  V  E ++ +GG G++++  + R  R+     I  G+ + + L V LN
Sbjct: 421 AISKIFASEAAWLVTDECIQVMGGMGFMKDAGVERVLRDLRIFRIFEGTNDILRLFVALN 480

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------- 507
             +   N  + L   L+  LG++G     I +      K   GL   LT +         
Sbjct: 481 GFQNAGNQLKSLQKALKNPLGNAGMLAGEITK----RAKRRAGLGSGLTLQGTVHPELNH 536

Query: 508 ------IALASSAA----ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                  A+    A     L + G   I + F+  R  D     + M+
Sbjct: 537 SGELTVKAIEQFGAVIEELLLKHGKKIIDEQFVLKRVADCAIDLYAMV 584



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +ID+  + + +AD A+D+ A   +  R + S ++  S ++            + WC 
Sbjct: 560 GKKIIDEQFVLKRVADCAIDLYAMVVVLSRASRSLNQGHSSAQHEKMLC------ETWCT 613

Query: 406 KMAPAVIAEAMECIGG 421
           +    V+ +      G
Sbjct: 614 EAHERVMQDIKFLRSG 629


>gi|224003693|ref|XP_002291518.1| probable acyl-coa dehydrogenase, short/branched chain specific
           [Thalassiosira pseudonana CCMP1335]
 gi|220973294|gb|EED91625.1| probable acyl-coa dehydrogenase, short/branched chain specific
           [Thalassiosira pseudonana CCMP1335]
          Length = 374

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 144/404 (35%), Gaps = 44/404 (10%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +    A++ AR  +   P +          D+         +++    +G         F
Sbjct: 2   MAREAARQWAR--DVLQPVVREMD------DECRTRA---EIIQGLFENGFMGMEIPEFF 50

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREY 183
                     I               L+    T + + V    +  +   W P++     
Sbjct: 51  GGSGMNFTSAILVVEELSRVDPSVSILVDIHNTLTNNAVRFWGSNELKSKWLPRL----- 105

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSD 241
                     T       L+E   GTD  A+ +      DG  Y L+G K W  +S  + 
Sbjct: 106 ---------ATECVSSFALSEAGSGTDAFAMKTTATPSPDGSYYILNGEKLWISNSREAG 156

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A     +    +   + D    G+   + + K+G R+++T  + F N     +  
Sbjct: 157 VFLVFANANPELKHKGITAFMVDARTEGIHVGKPEKKLGLRASSTCPVMFDNVKVDAVDV 216

Query: 302 LN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
           L  V  G    + I   L+   + ++  ++ +A+     A+ Y + R   G  L D   M
Sbjct: 217 LGEVGLGYKYCINI---LNEGRIGIAAQQLGIAKGCYDIAMPYIKERTQFGTKLADFQGM 273

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +   A IA +I A   +++      +      +EA+         K +  ++A    +++
Sbjct: 274 EHQYAQIATEIHACEVMTYNACRMKENGLPFVKEASM-------VKLYTSQVAEKAASKS 326

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +E +GG G+ ++    + YR+    SI  G+ N  +  +   ++
Sbjct: 327 IEWLGGLGFTQDTLAEKFYRDCKVGSIYEGTSNIQLQTIARRIK 370


>gi|239820862|ref|YP_002948047.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239805715|gb|ACS22781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 390

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 137/391 (35%), Gaps = 31/391 (7%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           L  + +Y   +L          D+V   PA   L+      GL       ++        
Sbjct: 12  LGSLRSYVRERLVPNEARVADADEV---PA--DLVADMAAQGLFGYSIPEAYGGAGMTTE 66

Query: 133 HKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
             + AA       +     + + +   +  +    T    + + P++ S E         
Sbjct: 67  ELVLAAMELSQCSVAFRARVGTNTGIGSEALVADGTEAQKRRYLPRLASGE--------- 117

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
               +     LTE   G+D  ++ +  ++  D         +  ++P++  F ++A+ + 
Sbjct: 118 ----LTGAFALTEPEAGSDAVSLRTSARREGDHYVLNGTKCFITNAPIAGLFTVMARTDP 173

Query: 252 R-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGP 308
             +    V   L +    GL       K+G   +   E+  ++        +      G 
Sbjct: 174 DDLSARGVTAFLVERGMPGLSTGPAYRKMGQAGSPVSEVHMNDCIVPAENVIGGCEGQGF 233

Query: 309 VEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              MK+L    +  A + +      L +A+ +   R   G  L    +++  IAD   +I
Sbjct: 234 KTAMKVLNKQRIHLAALCIGPAIRMLQDAVAFVSTRKQFGQALSGFQLIQALIADSQTEI 293

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA AL    A   DE    + E       A I KY+  +M   V   +++ +GG GYI 
Sbjct: 294 HAARALVLDTARKRDEGIDVTME-------ASICKYFASEMCGRVADRSVQMLGGYGYIA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +  + R YR+     +  G+     L++   
Sbjct: 347 DHGMERFYRDVRLFRLYEGTSQIHQLNIARR 377


>gi|120599110|ref|YP_963684.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|146292819|ref|YP_001183243.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|120559203|gb|ABM25130.1| isovaleryl-CoA dehydrogenase [Shewanella sp. W3-18-1]
 gi|145564509|gb|ABP75444.1| isovaleryl-CoA dehydrogenase [Shewanella putrefaciens CN-32]
          Length = 389

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 73/407 (17%), Positives = 149/407 (36%), Gaps = 43/407 (10%)

Query: 61  LGEYV--LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE V  L    Q+ A  AN   P          + D     P  + L       GL   
Sbjct: 12  LGEDVDMLRDAVQDFA--ANEIAPI-------AAKVDHDNAFP--NELWPVLGGMGLLGV 60

Query: 119 IWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                F    +   AH +    +   +        + S    + +           + PK
Sbjct: 61  TVPEEFGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPK 120

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                L ++E   G+D+ ++    +K  D         W  + 
Sbjct: 121 LVSGEH-------------IGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P ++ +++ A+ +   G   +   + +    G    +  +K+G R + T E         
Sbjct: 168 PDANTYVIYAKTDLTKGAHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCE---LVFEEV 224

Query: 298 LLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
            + + N+  G    +K+L+  LD   + +SG  + +  A       Y   R   G  + +
Sbjct: 225 EVPEENILGGLNNGVKVLMSGLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGE 284

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +AD+   + AA +  + +A S D  ++  ++AA A         +  ++A  +
Sbjct: 285 FQLVQGKLADMYTGMNAAKSYVYNVAKSCDRGETTRKDAAGA-------ILYSAELATKM 337

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A++ +GG+GY+ E +  R  R++    I  G+     + +   L
Sbjct: 338 ALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMLIGREL 384


>gi|332209942|ref|XP_003254069.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Nomascus leucogenys]
          Length = 430

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 126/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         +  ++   GL           +                +     
Sbjct: 73  IPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 L +TE   G+
Sbjct: 133 GFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKC-------------IGALAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+  +SD  I++A    E       +   L +  
Sbjct: 180 DLQGIKTNAKKDGSD-WILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 239 MKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGEENKGFYYIMKELPQERLLIADV 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y ++R   G  +     ++  +A++   I    A         D  
Sbjct: 299 AISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV-------DNC 351

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 352 LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|262198232|ref|YP_003269441.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081579|gb|ACY17548.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 609

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 87/454 (19%), Positives = 169/454 (37%), Gaps = 56/454 (12%)

Query: 83  QLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            LH  G  G + +  KV     + A  +     G +       +            A   
Sbjct: 59  PLHRTGDAGCKLEDGKVSTPAGFKAAWKSLYEAGWNSLSVSSEYGGQQGPTTLHTMAEEF 118

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A          ++  A ++    T    +    K++   +  T             +
Sbjct: 119 MSGANTAFTMYPGLTLGVAELIEAHGTDEQKQALCEKLYDGTFGGT-------------M 165

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
            LTE   G+D+ A T++   I DG Y +SG K +++    D       ++LA+       
Sbjct: 166 CLTEPHAGSDVGANTTRATPIGDGKYKISGTKIYITGGDQDLSENIIHMVLARTADAPQG 225

Query: 252 --RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLG-DLNV 304
              +  F+VPR   DGS  N +    +++K+G   +AT  L F       G L+G +   
Sbjct: 226 TRGLSLFIVPRDRLDGSGSNDVSVAGIEHKMGINGSATCILNFGENDECIGELVGSEEQK 285

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
               +  +  L  +   I  ++    +   A+ YA+ R                  +I  
Sbjct: 286 GIRQMFHLMNLARIGVGIQGLAVASSAYLNALEYAKDRKQGTDIAQRKDPDAERVPIIRH 345

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYARI------MAPITKYW 403
             ++R + D+   +    ALS +L    D A+      +E A A        + P+ K +
Sbjct: 346 ADVRRMLLDMKCRVEGIRALSVKLTMHNDRARLALESGDEKAAAYHHGQVDLLVPLLKAY 405

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
               +  + A A++  GG+GY+++  + ++ R+S   SI  G+ +   LD++   L +KG
Sbjct: 406 ATDQSFLICANAIQVYGGAGYLKDWPVEQYCRDSKIFSIYEGTNHIQALDLVGRKLGQKG 465

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
              F+     + + L  + +     L++++    
Sbjct: 466 GMNFQAFAKDVHKFLSENREN--EALKEAMQNLS 497


>gi|209867666|gb|ACI90354.1| hypothetical protein [Philodina roseola]
          Length = 636

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 80/475 (16%), Positives = 172/475 (36%), Gaps = 58/475 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--V 162
            ++      G         F  +        R   + + A   A  + + +  S     +
Sbjct: 115 EVMNGLKEQGAFGIQVPVDFGGLGLNNTQAARLFEI-VSAHDLAISICTGAHQSIGFKGI 173

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    + + P + + E                   LTE   G+D A+I ++ +  +
Sbjct: 174 LLFGTDEQKQKYLPSLAAGEQ-------------IAAFCLTEPSAGSDAASIKTKAELSA 220

Query: 223 DG-IYCLSGHKWFLSSP-MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQR 274
           DG  Y L+G K + S+  ++  F + AQ        G      +   + +    GL    
Sbjct: 221 DGKFYVLNGSKIWTSNGGIASVFTVFAQTPVVDEKTGEKKNK-ITAFIVERKFGGLTNGP 279

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV-----SGM 328
            + K+G +++ T E+ F +    +    NV  G     K+ +  L++    +       M
Sbjct: 280 PEKKMGIKASNTTEIYFEDCKVPV---ENVLGGVGNGFKVAMNILNNGRFGMVAGLSGTM 336

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           ++++ ++I +A+ R   G  +     ++  +  + +      +L+F LA + D       
Sbjct: 337 KMAIRKSIDFAKNRRQFGRTIDTYGNVQEKLVRMEMRQYVTESLAFLLAQNMDRGIPE-- 394

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +  A I K +  + A  V+ EA++  GG G++    + R  R+     I  G+ +
Sbjct: 395 ----YQCEAAIGKIFASESAWYVLDEAIQIHGGMGFMRGTGLERVMRDLRIFRIFEGAND 450

Query: 449 AMVLDVL-NLLEKGTNLFEQLFSTLEQD-----LGSSGKKVITILRDSISLCKEDK---- 498
            + L V    L+   +   +L   ++       +G S K++   +  +      ++    
Sbjct: 451 ILRLFVAFTGLQYVGSHLRELQQAVKSFNINVIMGESSKRLRRGIGMAAGPNVNEQIHSS 510

Query: 499 ------GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
                  L++ +    A+      L + G N   + F+ +R  D     + M   
Sbjct: 511 LHPSGVLLSKSIDRFGAMIEQ--ILIKYGKNIREEQFIVHRIGDTTIDLYAMAAA 563


>gi|317121737|ref|YP_004101740.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
 gi|315591717|gb|ADU51013.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885]
          Length = 608

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 84/437 (19%), Positives = 164/437 (37%), Gaps = 40/437 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           ALLRR+   GL        +E +   +A           A        + +      +  
Sbjct: 79  ALLRRAGELGLLAVEIPAEYEGLGLDKATATLVVEKLAPAGSFGVTFGAHTGIGTLPIVY 138

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P   + + PK+ + E+                  LTE   G+D     ++     DG
Sbjct: 139 FGNPEQKRRYLPKLATGEW-------------IAAYALTEPDAGSDALGGKTRAVLSPDG 185

Query: 225 I-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K W  +S  +  F++ A+V+G      +   + +    G+       K+G +
Sbjct: 186 KHYILNGQKQWITNSGFAHVFVVYAKVDGDK----MTAFIVERDFPGVSVSEEVRKMGIK 241

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  L  +     +   LG++        ++  +     A  ++   +  +A A  YA
Sbjct: 242 GSSTRMLYLNEVPVPVENVLGEVGKGHHIAFNILNIGRWKLAAGNLGACKELIALATRYA 301

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
           + R   G  +   P++++ +A +A+   A  A+ +R A +FD              +   
Sbjct: 302 QGRKQFGQPIATFPLIQQKLAAMAVRTYALEAMVYRTAGAFDASLREIDGDAPDAGRQAI 361

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              +   + A I K +  +    V+ EA++  GG GY++E  + R YR++  N I  G+ 
Sbjct: 362 AAISEYAVEASINKVFGSETLDFVVDEAVQIHGGYGYMQEYEVERAYRDARINRIFEGTN 421

Query: 448 NAMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
               L +   L     KG     Q  + ++++L             S  L +E   +A  
Sbjct: 422 EINRLLIPRELMRRTMKGQLPLMQALTRVQKELAEMAPLGPAGEAASGPLAEEQALIAN- 480

Query: 504 LTEKIALASSAAALYRA 520
            T ++ L  +  A+ + 
Sbjct: 481 -TRRLGLMVAGLAVQKY 496


>gi|288920066|ref|ZP_06414385.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288348549|gb|EFC82807.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 401

 Score =  246 bits (629), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 143/384 (37%), Gaps = 30/384 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLE 147
           P     ++ +  PA  AL   +   GL        +  +    + ++R  A L       
Sbjct: 30  PAEAEIEETDAIPA--ALRAEAARMGLFGFAIPAEYGGLGLSMSEEVRLVAELGYTTPSF 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + +  +  ++    T    + + PKI S E+                  LTE+  
Sbjct: 88  RSMFGTNNGIAGHVLLEGATEEQRQTYLPKIASGEW-------------TASFALTEEGA 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGS 266
           G+D A + +   +  DG       ++  ++P +D  ++ A+ +    G   +   + +  
Sbjct: 135 GSDPAGLATTAVRKDDGWVINGSKRYITNAPSADVLMVFARTDPAATGGDGISVFMVERD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILI--YLDS 320
             G+       K+G   + T ++ F +        + G+     G    M+ L    +  
Sbjct: 195 TPGVSVAPKDVKMGQAGSLTADVHFDDVRVGPETLVGGEAGEGRGYRTAMRCLAHGRIHI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A + V   +  + E++ YA  R   G ++    +++  +AD A D+ AA AL  + A +F
Sbjct: 255 AALCVGMAQRLVDESVAYAASRSQGGQVIGTYQLIQGLLADSATDLYAARALVTQTAAAF 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+           RI     KY+  +    +   A++  GG+GY+    + R YR++   
Sbjct: 315 DDGSDT-------RIGPSCAKYFASEAVGRIADRAVQIHGGAGYMRGVPVERFYRDARLF 367

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            I  G+     L +   L +    
Sbjct: 368 RIYEGTSQIQQLVIARQLLRDAAA 391


>gi|262375469|ref|ZP_06068702.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262309723|gb|EEY90853.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 380

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 130/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W++    P   ++      +G  C      +        + +        A   A
Sbjct: 25  PYYDQWEREGLMP--RSVWNALGENGFLCVDVPEEYGGYGVPTDYSLMLIEESARAGYSA 82

Query: 149 --GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L   S  +A  +  + T    K W PK+ + E             V   +G+TE  
Sbjct: 83  IATGLSCHSDIAAPYILHIGTEEQKKYWLPKMVTGE-------------VVGAIGMTEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDG 265
            G+D+ A+ +      D  Y L+G K F+S+      ++LA + + +     V  LL D 
Sbjct: 130 AGSDLQAMRTSAILQ-DEYYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDT 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +KIG  +  T EL F N       LLG        +           A 
Sbjct: 189 HLEGFKKGTNLDKIGLHAQDTSELFFDNVKVPKEQLLGQPGQGFAYLMQELPRERTAIAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++  +R S+     Y + R   G  +      +  +A   +D  A  A   +    + +
Sbjct: 249 TALGAIRGSIDVTTQYVKERQAFGQAIGQFQNTRFVLAQAKIDELATAAFYNQNLELYMQ 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K   E AA         K +   M   +    ++  GG GY+ E  I+R + ++    I
Sbjct: 309 GKLDVETAA-------ALKSFSTDMQMKIADNLLQLFGGYGYMTEYPISRFFVDARIQRI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 362 YGGTNEIMKEIVARGL 377


>gi|83747332|ref|ZP_00944373.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|83726032|gb|EAP73169.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
          Length = 385

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 129/357 (36%), Gaps = 26/357 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRV 170
             GL       ++  +    A +                +   +V   S  + +  T   
Sbjct: 46  AMGLFGLSIPEAYGGIGLSMAQECEVVYDLGHTSFAFRSVFGTNVGIGSQGILMDGTEAQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P+I S E             + I   LTE   G+D A++ ++     D       
Sbjct: 106 KAAYLPRIASGE-------------LIISFALTEPDAGSDAASLQTRATPDGDHYVINGT 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++P + AF ++A+  G  G   +   +      G+   +   K+G R   T ++ 
Sbjct: 153 KRFITNAPRAGAFTLMARTGGE-GAGGISAFIVPADTPGIMLGKPDRKMGQRGTKTCDVM 211

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
             N        +      G    MK+   LD   + +S +   +A      A  YA+ R 
Sbjct: 212 LDNVRVSAANLIGGVAGQGFKTAMKV---LDRGRLHLSALACGMAHRLITDAAAYAKARR 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + D  +++  +AD   ++ A  ++    A  +D AK          ++A   K +
Sbjct: 269 QFGRPIADFQLIQAMLADSQAELYAGLSMVRDGARRYD-AKPAGRPDHEVSMLASCAKLF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           C +M   V   A++  GG+GYI E  + R YR+     +  G+     L +   L +
Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKVERFYRDVRLLRLYEGTTQIQQLIIAKHLLR 384


>gi|56695213|ref|YP_165561.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56676950|gb|AAV93616.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 567

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 88/474 (18%), Positives = 165/474 (34%), Gaps = 38/474 (8%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHA---YGPGGERWDKVEFHPAWHALLRRSIHDGL 115
              G  ++S    E  RM +     L       P       +   P +    +     G 
Sbjct: 30  AEAGADMVSAILTEAGRMCDEVMAPLQRGGDLNPARLENGALRSSPGFAEGWKAIAEGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                      +    A       +   A L        S      +    +  +   + 
Sbjct: 90  IGMSGSPEHGGMGLPMAVTTAVNDMMSGACLSLQLAPLMSQGQIEALEHHASDAIKALYL 149

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           PK+ S E+  T             + LTE + G+D+ A++S+ +   DG Y ++G K F+
Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIFI 196

Query: 236 SSPMSDA-----FIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKI 279
           S   +D       ++LA+  +G  G   +   L            G  N L    L++K+
Sbjct: 197 SWGDNDFCDNVCHLVLARLPDGVPGTKGISLFLVPRNLPDENGNAGVANSLKVVSLEHKM 256

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           G   + T  +++    G+L+G+ +     +  M     L      V     +   A+ YA
Sbjct: 257 GLHGSPTCVMQYDGATGWLVGEEHGGMAAMFTMMNNARLGVGGQGVGVAEAAWQHAMAYA 316

Query: 340 RRRHVSG---GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYAR 394
             R       G + D   ++R +  +  D+ AA A+    A + D   +   +E  A A 
Sbjct: 317 MERKQGKSASGTIADHADVRRMLTSMKADVFAARAILAACAVAIDMGNATGSAEWKARAA 376

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD- 453
            + PI K +      AV    ++  GG G+IEE   A+ YR+    +I  G+     +D 
Sbjct: 377 FLTPIAKAFGTDTGIAVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDL 436

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           V   +  G     +L   +E     +  ++  +        +  +    ++  +
Sbjct: 437 VARKMMDGGEAAAKLLDEIEDHAERARGRLPELAGPVWEATETLREATEWMVAQ 490


>gi|111222831|ref|YP_713625.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150363|emb|CAJ62060.1| Putative Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 389

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 132/384 (34%), Gaps = 29/384 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D    +P    L+ +    G++       +       +   R         +  
Sbjct: 29  PVAQELDHTNTYPE--DLIEQMKEMGVYGLGIPEPYGDFGVSTSCYARVTEELSRGWMSL 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                     + ++    T    + + P++ + E   T             + LTE  GG
Sbjct: 87  AGAFGGHSVVSKLILRFGTQEQREKYLPRMATGELRAT-------------MALTEPGGG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           +D+ A+ +  +   DG        W  ++  S    +L + +   +     +  LL +  
Sbjct: 134 SDLQALRTVARPDGDGWVVDGAKTWISNARRSGLIALLCKTDPAAKPAHRGISILLVEHG 193

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
           P G    R   K+G +   + EL F          L G        +     +  +  A 
Sbjct: 194 P-GFTVSRDLPKLGYKGIESCELHFDGYRAPGDSVLGGVTGKGFNQMMAGLEVGRIQVAS 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +  +A+ YA+ R   G  + +   +   +AD+   I AA  L    A  FD 
Sbjct: 253 RALGVARAAFDDALRYAQERETFGKPIWEHQSIGNYLADMGTKILAARQLILHAAEVFDS 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                   A A + A + K +  +MA  V  +A+   GG GY  E  + R++R++P   +
Sbjct: 313 G-------ARADMEAGMAKLFASEMAATVTLDAIRIHGGYGYSTEFDVERYFRDAPLMIV 365

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFE 466
             G+       +   L +  N   
Sbjct: 366 GEGTNEIQRNVIARQLVQRPNPLR 389


>gi|170722519|ref|YP_001750207.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760522|gb|ACA73838.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 594

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 83/533 (15%), Positives = 187/533 (35%), Gaps = 60/533 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    QE A  A      L+      G RW   +V     +         +G      
Sbjct: 36  ELVEAILQEAANYAAGILDPLNRSGDIQGARWHDGEVTSAEGFREAWSSFCENGWIGMPA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +               ++  + L        ++ +   +A   +  + + +   + +
Sbjct: 96  SLEWGGHGLPTLVSTAVLEMWKSSNLAFSLCQMLTLGAVEAIAHHGSNALKQRFLEPMVA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + G+D+AA+  +     D  Y + G+K F++    
Sbjct: 156 GRWTGT-------------MNLTEPQAGSDLAALRGRAVPEGDH-YRIVGNKIFITWGEH 201

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA++         +  FL P+ L +     G  N L    +++K+G   +
Sbjct: 202 DMAENIVHLVLARLPDAPPGVKGISLFLCPKFLINADGSLGERNDLICTSIEHKLGIHGS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F +     G+L+G+ +     +  M     L+  +  V     +   A  YA +
Sbjct: 262 PTASMSFGDGGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARSYALQ 321

Query: 342 RHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSE 388
           R   G         +     ++R + D+     A  A+++  A   D      +A+ R++
Sbjct: 322 RVQ-GKPTLAGSSTIAGHADVRRMLMDMKARTEAMRAVAYFCAGQMDRAAGHPDAQERTQ 380

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ P+ K WC   A  + ++ ++  GG GY+EE   A+++R++   +I  G+  
Sbjct: 381 AQDLVGLLTPVVKGWCTDNAEGITSDGVQIHGGMGYVEETGAAQYFRDARITTIYEGTTG 440

Query: 449 AMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI--------TILRDSISLCKEDK 498
                L    +  +G    + L + ++ D                  ++R +++L +   
Sbjct: 441 IQANDLIGRKIAREGGRTIKALLTRIDSDARRLMDAHDPELSPIGHALMRAAMALEESVD 500

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
            L      +    ++ A  +   +  +   +L  R  +   +         + 
Sbjct: 501 WLLINSETQSQNCAAGAVPFLRLVGTVIGGWLSARMAEAATTQLSCTPSDTDF 553


>gi|160774198|gb|AAI55202.1| Acadvl protein [Danio rerio]
          Length = 659

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 85/468 (18%), Positives = 171/468 (36%), Gaps = 60/468 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             G            V        R   +  M  L     L +        + L   P+ 
Sbjct: 143 EMGAFGLQVPADLGGVGLTNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGNPQQ 202

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + PK+ + E                   LTE   G+D A+I +   +   G  Y ++
Sbjct: 203 KEKYLPKLATGEN-------------IAAFCLTEPASGSDAASIKTTAVRSPCGQYYTMN 249

Query: 230 GHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G K ++S+   ++ F + A+        G +    +   + + S  G+     + K+G +
Sbjct: 250 GSKIWISNGGTAEIFTVFAKTPVKDEKTGEMKDK-ITAFIVERSFGGVSSGPPEKKMGIK 308

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIH 337
           ++ T E+ F N        L    G  +    +  L++    ++      M+  + +A+ 
Sbjct: 309 ASNTAEVYFENVRVPADCVLGEVGGGFKVAMNI--LNNGRFGMAAALSGTMKGVITKAVD 366

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A  R   G  + +   ++  +A +A+      ++++ ++ + D        A   +I A
Sbjct: 367 HAANRTQFGNKIHNYGAIQEKMARMAMLQYVTESMAYMVSGNMDSG------ATEFQIEA 420

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LN 456
            I+K +  + A  V  E ++ +GG G++++  + R  R+     I  G+ + + L V LN
Sbjct: 421 AISKIFASEAAWLVTDECIQVMGGMGFMKDAGVERVLRDLRIFRIFEGTNDILRLFVALN 480

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------- 507
             +   N  + L   L+  LG++G     I +      K   GL   LT +         
Sbjct: 481 GFQNAGNQLKSLQKALKNPLGNAGMLAGEITK----RAKRRAGLGSGLTLQGTVHPELNH 536

Query: 508 ------IALASSAA----ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                  A+    A     L + G   I + F+  R  D     + M+
Sbjct: 537 SGELTVKAIEQFGAVIEELLLKHGKKIIDEQFVLKRVADCAIDLYAMV 584



 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +ID+  + + +AD A+D+ A   +  R + S  +  S ++            + WC 
Sbjct: 560 GKKIIDEQFVLKRVADCAIDLYAMVVVLSRASRSLSQGHSSAQHEKMLC------ETWCT 613

Query: 406 KMAPAVIAEAMECIGG 421
           +    V+ +      G
Sbjct: 614 EAHERVMQDIKFLRSG 629


>gi|118431760|ref|NP_148425.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|116063082|dbj|BAA81169.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 399

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 140/379 (36%), Gaps = 34/379 (8%)

Query: 93  RWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           RW ++E  +     +L+ +   G+        +                   A    G  
Sbjct: 37  RWREIEETNRIPEDILKEAADLGIFGVGIPEEYGGQGGGHLMTALLTEEIARAVPALGVT 96

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +   A  + L  T    + +               P+ +         TE  GG+D+
Sbjct: 97  IGVNHLFAVPILLFGTEEQKRKYV-------------TPIAQGKARGAHANTEPTGGSDV 143

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVGCFLVPRLLEDGSP 267
           A I +  +K++D  Y ++G K F+S    +D  ++ A+          + +   + +   
Sbjct: 144 AGIRTTARKVNDH-YVINGRKVFISGARDADYLVVSARTNPPREDKRWWGISVFIVEKDM 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDSA 321
            GL   +    +G R     E+   +         N+     E  K++        +  A
Sbjct: 203 PGLKIGQQFKVLGMRGEQPYEVILEDVKVPA---ENLVGKEDEGFKVIVSTYDYTRIGIA 259

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + S  +A++YA +R V G  LI   ++   +A++ + + AA  L++  A   D
Sbjct: 260 AQAVGIAQASFEKALNYALQREVFGQPLIQFQMIIDKLANMYMKLEAARLLTYWAATLAD 319

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K          + A + K +  + A  +  +A++  GG G   E  + R+ R++   +
Sbjct: 320 KGKRE------FIVAASLAKAFATEAAEWIARQAIQIHGGYGVDPETGVERYLRDAIITT 373

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     L ++  L +
Sbjct: 374 IYEGTNEIQRLTIVRQLVR 392


>gi|90577556|ref|ZP_01233367.1| putative acyl-CoA dehydrogenase [Vibrio angustum S14]
 gi|90440642|gb|EAS65822.1| putative acyl-CoA dehydrogenase [Vibrio angustum S14]
          Length = 386

 Score =  246 bits (629), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 63/396 (15%), Positives = 136/396 (34%), Gaps = 35/396 (8%)

Query: 72  ELARMAN-----YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L   AN      N        P     D+    P +  L +     GL        +  
Sbjct: 11  DLGDTANMLREQVNLYAAEHIAPIANEIDQDNQFPHY--LWQSLGQMGLLGVTIAEQYGG 68

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                  H I    +   +        + S   A+ +         + + P + + E+  
Sbjct: 69  AAMGYLEHVIVMEEISRASASIGLSYGAHSNLCANQIFRNGNDAQKQQYLPALITGEH-- 126

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + +   D         W  + P ++  ++
Sbjct: 127 -----------IGALAMSEVNAGSDVMSMQLKAEDHGDHFVLNGNKMWITNGPEANTLVV 175

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+         +   + +   +G    +  NK+G R + T EL F N       +LG++
Sbjct: 176 YART----SSNAITAFIIESQFDGFSTAQKLNKLGMRGSNTCELVFINCKVPKQNVLGEV 231

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +     +        +  A   +   +  L   I Y   R   G  + +  +++  IAD+
Sbjct: 232 DHGAKVLMSGLDFERVVLAAGPLGIAQSCLDVVIPYIHERKQFGKAIGEFELIQAKIADM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + AA +  + +A + D  +   ++AA   ++         ++A  +  E ++ +GG+
Sbjct: 292 YTQLNAARSYVYTVAKACDRGEVTRKDAAGVILL-------SAELATKMALETIQILGGN 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GYI +    R  R++    I  G+     + +   L
Sbjct: 345 GYINDYPAGRLLRDAKLYEIGAGTSEIRRMLIGREL 380


>gi|299689355|pdb|3NF4|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Flavin Adenine
           Dinucleotide
 gi|299689356|pdb|3NF4|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Flavin Adenine
           Dinucleotide
          Length = 387

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 134/401 (33%), Gaps = 29/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + S  A EL  +      ++    P  +R +K E +P    +  +    GL       
Sbjct: 13  RLLPSQEAAELIELTREIADKV--LDPIVDRHEKDETYPEG--VFEQLGAAGLLSLPQPE 68

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S+  + +  T    K W P + S E
Sbjct: 69  EWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHSLSSHPLLVFGTEEQKKRWLPGMLSGE 128

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              L+E + G+D AA+         G        W      +D 
Sbjct: 129 Q-------------IGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADF 175

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + + A+     G   V   L      GL + + + K+G  +  T    + N        +
Sbjct: 176 YTLFART--GEGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRI 233

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+                L  A ++    + +L EA+ YA  R   G  +ID   +   +
Sbjct: 234 GEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFLL 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  +A A A     A   D+ +  S++       A I K      A  V  +A++  
Sbjct: 294 ADMAAAVATARATYLDAARRRDQGRPYSQQ-------ASIAKLTATDAAMKVTTDAVQVF 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG GY  +  + R+ RE+    I  G+     L +   L +
Sbjct: 347 GGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387


>gi|328781352|ref|XP_395491.4| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Apis mellifera]
          Length = 594

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 85/472 (18%), Positives = 176/472 (37%), Gaps = 56/472 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
             LR     G+ C    + +  +        R   +     L     L +        + 
Sbjct: 74  KTLRSMWELGVFCLQVPQEYGGLGLNNTQYSRCVEICGYNDLGIGITLGAHQSIGFKAIL 133

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP   K + P++ + +Y                  LTE   G+D  +I S+  K +D
Sbjct: 134 LYGTPEQKKKYLPRVCNGDY--------------AAFCLTEPSSGSDAGSIRSRAIKSAD 179

Query: 224 GI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRL 275
           G  Y L+G+K ++S+   ++   + AQV       G++    +   + + S  G+     
Sbjct: 180 GSHYILNGNKIWISNGGLAEIMTVFAQVPVQDLETGKIKDK-ITAFIVERSFGGVISGPP 238

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MR 329
           + K+G + + T E+ F N         N+  G  +   + +  L++    ++      MR
Sbjct: 239 EKKMGIKCSNTTEVHFENVKIPA---ENIIKGEGQGFSVAMNVLNNGRFGMAAALSGTMR 295

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             + +A+ +A +R   G  +     ++  +  +A+      +L++ +A + D        
Sbjct: 296 YCIKKAVEHATQRVQFGHTIDYYGSIQEKLGRMAMLHYVTESLAYSIAGNMDNGSQD--- 352

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                + A I+K +  + A  V  E ++ +GG  Y+++  + R  R+     I  G+ + 
Sbjct: 353 ---YYLEAAISKCFASEAAWWVCDETIQILGGMAYMKDTGLERVMRDLRIFRIFEGTNDI 409

Query: 450 MVLDV-LNLLEKGTNLFEQLFSTLE----------QDLGSSGKKVITI--LRDSISLC-K 495
           + + + L+ L+      +QL S ++          ++L     + I     R+ I L   
Sbjct: 410 LRIFIVLSGLQHAGIHLQQLMSAIKIPSINLRLVFEELSKRAMRTIGFSSTRNLIQLVHP 469

Query: 496 EDKGLARFLTEKIALASSA--AALYRAGM-NDIADVFLENRFLDNCHSTHCM 544
                A    + I         A+ + G  N +   F+ NR        + M
Sbjct: 470 RLHSSATLCAKSIEAFGQTIEGAIIKYGPGNIVEQQFILNRLAQAAFDIYTM 521


>gi|170726269|ref|YP_001760295.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169811616|gb|ACA86200.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 596

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 96/551 (17%), Positives = 193/551 (35%), Gaps = 63/551 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  L+  +     +  + +   +     Q +A  A      L++   
Sbjct: 7   PLRDYQF-----VLNELLNIYEESELQGFDEIDADLGDAILQGVADFATEIMLPLNSSGD 61

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +     V     +    ++ + +G      D  F      +   + A  +     +
Sbjct: 62  VEGCKLLDGHVIAPKGFKEAYQQYVDNGWGTLTCDPEFGGQGLPEVIGVFATEMKTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ + E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLEKLVTGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++     +G + +SG K F+SS   D       ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVDAGEGFFAISGEKIFISSGDHDLAENIIHLVLARLPDAPAGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP+ L +     G  N LC   L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKYLVNDDGSIGDANKLCATGLEHKMGIHGNSTCVMNFDGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R    G             ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALIYAKGRIQGRGLSGVKAPEMAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPAVI 412
           +         A A+  + A   D+A+  S      E +  A +  PI K +         
Sbjct: 349 LMSQKAFNEGARAMMGQQALWLDKAERHSNPEKAKEASKLAALFTPIVKGFVTDRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF---E 466
            +A +  GG GYI E  + +  R+     I  G+     LD++    L +KG  L     
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKILSDKGAALMSWSG 468

Query: 467 QLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMND 524
            +   + +++G+   K  I  L D+    ++         EK      AA++ Y   +  
Sbjct: 469 LVKQFIGENMGNDQMKPYIAGLMDASGDLEKATQFIATNAEKNPDILGAASMPYMQILGI 528

Query: 525 IADVFLENRFL 535
            A  ++  R  
Sbjct: 529 TALAWMWARIA 539


>gi|50843651|ref|YP_056878.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202]
 gi|282854496|ref|ZP_06263832.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139]
 gi|50841253|gb|AAT83920.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202]
 gi|282582357|gb|EFB87738.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139]
 gi|313765182|gb|EFS36546.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA1]
 gi|313817094|gb|EFS54808.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA1]
 gi|314916814|gb|EFS80645.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA4]
 gi|314918991|gb|EFS82822.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA1]
 gi|314921178|gb|EFS85009.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA3]
 gi|314932475|gb|EFS96306.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL067PA1]
 gi|314956298|gb|EFT00670.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA1]
 gi|314958689|gb|EFT02791.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA1]
 gi|314968821|gb|EFT12919.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA1]
 gi|314980744|gb|EFT24838.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA3]
 gi|315090937|gb|EFT62913.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA4]
 gi|315100028|gb|EFT72004.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA2]
 gi|315102811|gb|EFT74787.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA1]
 gi|315105278|gb|EFT77254.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA2]
 gi|315107366|gb|EFT79342.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA1]
 gi|327455501|gb|EGF02156.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA3]
 gi|327456157|gb|EGF02812.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA2]
 gi|328756836|gb|EGF70452.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA1]
 gi|328759117|gb|EGF72733.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA2]
          Length = 382

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|282865016|ref|ZP_06274069.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559939|gb|EFB65488.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 388

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 149/405 (36%), Gaps = 33/405 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +EL R       ++ A    G+ +++ EF    + ++      GL    +  
Sbjct: 4   DHRLTAEHEELRRTVEEFAHEVVA-PKIGDFYERHEFP---YEIVAEMGRMGLFGLPFPE 59

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  I    L  +    A  L +     A  V    T    + W P + S 
Sbjct: 60  EYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPVYRFGTEEQKRRWLPSLCSG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMS 240
           E                  GLTE  GG+D     +        G + ++G K F+++  +
Sbjct: 120 E-------------ALGAFGLTEPDGGSDAGGTRTTAVLDEAAGEWVINGSKCFITNSGT 166

Query: 241 DA--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D    + +  V GR   G   +  ++      G       +K+G  ++ T EL FS+   
Sbjct: 167 DITELVTVTAVTGRKENGAPRISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFSDVRV 226

Query: 297 FLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G  + ++IL    +  + +S    +  + E++ YA  RH  G  +    
Sbjct: 227 PAANLLGEEGRGYAQFLRILDEGRIAISALSTGLAQGCVDESVKYAAERHAFGKPIGANQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+ +    A       A+     +   +EAA       I K +   +A     
Sbjct: 287 AIQFKIADMEMRAHMARVGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAVDNAR 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 340 EATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|154244859|ref|YP_001415817.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158944|gb|ABS66160.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 388

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 121/370 (32%), Gaps = 26/370 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A++      GL        F  +    +   +    L   A        +        +A
Sbjct: 39  AIVAEMRDLGLFGLTAPEDFGGLGLTMEEEVLAMFELGRAAPAFRSMFATNVGIGMQGIA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  TP     + P + S E             +     LTE   G+D  ++ +  ++  D
Sbjct: 99  IDGTPEQKAKYLPGLASGE-------------IVGSFALTEPDVGSDAGSVKTTARRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  F ++A+ +  + G   V     +    GL   + + K+G +
Sbjct: 146 VYVLNGTKRFITNAPHAGLFTVMARTDPSQKGASGVSAFAVERGTPGLFTGKPEKKMGQQ 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
                ++ F +        +      G    MK+L    L  A   V      L + + Y
Sbjct: 206 GAHVCDVIFDDCRVPASALIGGVEGQGFKTAMKVLDKGRLHIAAACVGLSERILDDMLAY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L D  +++   AD   D  AA  +    A   D  +  S E       A 
Sbjct: 266 AVGRRQFGRPLADFQLLQAMFADSKADAYAARCMVLDAARRRDAGQDVSVE-------AS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +    +    ++  GG+GYI E    + YR++    I  G+     + +   L
Sbjct: 319 CAKMFASEAVGRIADRNVQVHGGNGYIREYRAEQLYRDARLFRIYEGTTQVQQIIIAKAL 378

Query: 459 EKGTNLFEQL 468
                    L
Sbjct: 379 TAEARARAGL 388


>gi|126435772|ref|YP_001071463.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235572|gb|ABN98972.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 399

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 84/409 (20%), Positives = 148/409 (36%), Gaps = 38/409 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
               E   L +   S + +E+A       P+L         W+ V   P    L   +  
Sbjct: 24  WTTPERRALSQMARSFSEREIA-------PKL-------AEWEHVGEIP--RDLHLNAAE 67

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL    +                     L A           V +A     +  P +  
Sbjct: 68  VGLLRIGFPEEVGGSGGNAIDSALVTEAILAAGGST------GVCAALFTHGIALPHIAA 121

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + +  +  R   PT         +   LG+TE   G+D+A + ++  +  D  Y ++G K
Sbjct: 122 NGSDALIQRYVRPTL-----AGKMIGSLGVTEPGAGSDVANLRTRAVREGD-TYVVNGAK 175

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            F++S +   F+  A   G  G   V  L+ D +  G    R  +K+G R + T EL F 
Sbjct: 176 TFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFV 235

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A+ + +    +L  A  +AR R   G  L
Sbjct: 236 DVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPL 295

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             + +++  +A++A  +  A   +  +   +   +    E + A+  A     +      
Sbjct: 296 TGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDY------ 349

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V+ EA++  GG GY+ E  I RHYR+     I  G+   M   +   +
Sbjct: 350 -VVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 397


>gi|27378410|ref|NP_769939.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351558|dbj|BAC48564.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 82/420 (19%), Positives = 141/420 (33%), Gaps = 43/420 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           +  F S   K L               A   +             +R+D+         L
Sbjct: 1   MDRFYSQDQKALRETARRFAEAEILPRAATIDRE-----------DRFDRT--------L 41

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +     GL                     A            +  +  V +        
Sbjct: 42  YKGMADLGLFGICLREGAGGAGLDAVAACIAMEELARCSGAVANAFAIPVEAVLFFDHHG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T   HK   PKI S +  P                ++E   G+D+A I +   + S+G  
Sbjct: 102 TDA-HKALIPKILSGDIIP-------------ATAVSEPDHGSDVAGIRTHAVRESNGWR 147

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W     ++D  ++ A+     G   +  LL DG+  G+   + +  +G      
Sbjct: 148 LNGTKAWVTLGGVADRIMVFARTGSEAGHRSISCLLVDGALPGIARGKNEELLGMHGLDD 207

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            ++ FS+       ++G  N +            L  A M++   + +  +A  YAR R 
Sbjct: 208 CQITFSDVRLPADSVMGPENQAFKMAMSNFNFSRLMMASMALGMAQAAFEDATAYARDRK 267

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +I    ++  +AD++ DIAAA  L    A   D  +  ++EAA A       K +
Sbjct: 268 QFGQAIIGFQAVQFMLADMSTDIAAARLLIHHAARLHDAGEPIAKEAAQA-------KLF 320

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
              MA   ++ A++  GG+GY  E  I R +R+     I  G+     L +   +EK   
Sbjct: 321 TTDMAMKHVSNALQIHGGNGYSREYRIERLFRDVRLAQIYEGTNQIQRLIIARQVEKEAA 380


>gi|301057558|ref|ZP_07198638.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300448282|gb|EFK11967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 384

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 147/397 (37%), Gaps = 36/397 (9%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           E+ R+A     +       GE  +  EF     +L ++    GL       ++       
Sbjct: 12  EMIRLAVREFAESEIKPVAGELEENEEFS---VSLTQQMGDIGLFGMTVPEAYGGQGLDY 68

Query: 132 -AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            ++ I    +  +   +A  L + +      +         + + P +            
Sbjct: 69  ISYIIAVEEIARIDGSQAATLAAGNSLGIGPIDAFGLEAQKRKYLPDLC----------- 117

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA 247
             +    IG GLTE   G+D  A ++   +  D  + ++G K   ++   PM+   I+ A
Sbjct: 118 --RGRTLIGFGLTEPNAGSDAGATSTTATRDGD-SWIINGRKTLTTNADTPMTKGSIVQA 174

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
               R  G       + +    G     LK K+  R + T EL  +N        L    
Sbjct: 175 LTGTRPNGKVEYTCFIVENDTPGFTRNTLKRKLMWRGSNTAELFLNNCRVPDNAVLGNPG 234

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
              + M  L  LD   +S+  M +  A+     A+ Y++ R   G  +  Q  +   +AD
Sbjct: 235 DGFKQM--LATLDGGRLSIGAMGLGCAQGAYEAALRYSKERVQFGKPISRQQAISFKLAD 292

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +AL I  A  L ++     +  +   +E+A A       K +C ++A  V  EA++  GG
Sbjct: 293 MALKIELARNLLYKACWLAENKRPYGKESAMA-------KLYCSEIAREVADEAVQVHGG 345

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G  ++  + R YR+     I  G+   + + +   +
Sbjct: 346 YGLFKDYDVERFYRDQRLLQIGEGTSEVLRIVISRAI 382


>gi|34540558|ref|NP_905037.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis
           W83]
 gi|188994663|ref|YP_001928915.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC
           33277]
 gi|34396871|gb|AAQ65936.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis
           W83]
 gi|188594343|dbj|BAG33318.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC
           33277]
          Length = 573

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 101/500 (20%), Positives = 177/500 (35%), Gaps = 57/500 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE          A   ++  P LH          +V +       L+     GL  
Sbjct: 55  LEIVGEICG-DIIAPNAESVDHEGPTLHD--------GRVAYAAGTKQNLKAITDAGLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +       I AA +   A     ++       A  +         + + P+
Sbjct: 106 ISMPRRYGGLNFPITPYIMAADIVSRADAGFENIW-GLQDCAETLYEFGNEDQRERFIPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLS 236
           + + E               + + LTE   G+D+ A+  +     +DG + L+G K F++
Sbjct: 165 VCAGE--------------TMSMDLTEPDAGSDLQAVMLKATYSEADGCWYLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  S   ++LA+ E G      +   + D    G+  +R +NK+G +   T EL F N  
Sbjct: 211 NGDSHIHLVLARSEEGTTDARGLSMFIYDHRDGGVTVRRTENKMGIKGAPTCELVFKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L GD  +     V  +     L     SV     +  EA  YA  R   G  +I    
Sbjct: 271 AELCGDRKMGLIKYVMALMNGARLGIMAQSVGLSEAAFREAHSYALDRKQFGKPIIAFAP 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA-------YARIMA 397
           +   ++ I     A+ A+ +  +   D          E K  SEE A        A    
Sbjct: 331 VYEMLSLIRAKADASRAMLYETSRFVDMYKVLEDISHERKLTSEERAEMKHFSRLADAYT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A   + + ++  GGSG++++ +  R YR+    +I  G+    V+  +  
Sbjct: 391 PMGKGMTSEFANQNVYDCVQIHGGSGFMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRH 450

Query: 458 LEKGTNL-------FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK------GLARFL 504
           +  GT +        +       Q +  +  ++       I+   E K        AR L
Sbjct: 451 ITTGTYIARIREEYQQTEVKPELQPMKEALARMTDRAEALIAFVTEQKDQELLDFQARRL 510

Query: 505 TEKIALASSAAALYRAGMND 524
            E  A A     L  A  +D
Sbjct: 511 VEMTAHAVFGHLLMLAANDD 530


>gi|113970722|ref|YP_734515.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885406|gb|ABI39458.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4]
          Length = 596

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 100/547 (18%), Positives = 197/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIAPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +    KV     +    ++ + +G      D ++      +   I A  +     +
Sbjct: 62  VQGCKLVDSKVVTPEGFADAYQQFVDNGWPTLTCDPAYGGQGLPEVVGIFATEMQTSTNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + S +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYSAIHAHGSEALKQKYLAKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++    +DG + ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G  N L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  S+       A  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDLGSSGKK------VITILRDSISLCKEDKGLARFLTE--KIALASSAAALYRAGM 522
            + + + S GK       V  ++  +  L K    LA        I  A+S A L   G+
Sbjct: 469 LVTEFIQSQGKDPQMQPYVSGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGI 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|111222212|ref|YP_713006.1| butyryl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111149744|emb|CAJ61436.1| Butyryl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 382

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 126/362 (34%), Gaps = 25/362 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +       GL    +   F    +     ++A              +S    S   +A
Sbjct: 42  REVFAILGEAGLLALPYPEEFGGGGQPYEVYLQALEEIAYRSASVAVGVSVHSLSCFPLA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T        P++ S              ++     L+E   G+D AA+T+  +   D
Sbjct: 102 YHGTDDQRAALLPRLLSG-------------TLLGAYCLSEPHAGSDPAAMTTAARPDPD 148

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y LSG K W      +D + + A+         +   L D    G+     + K+G  
Sbjct: 149 GGYRLSGTKAWVTHGGAADFYTVFARTSEDRS-GGISCFLVDAGTAGMDVHPPERKMGLT 207

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T ++ F         L+G                 L  A  +V   + +L +A+ YA
Sbjct: 208 ASPTTQIGFDAAPVPADRLIGTEGNGLRIALAALDAGRLGIAAAAVGLAQRALDDAVAYA 267

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +ID   +   +AD+A  + +A A +   A   D           A   A I
Sbjct: 268 KERQAFGKAIIDHQGLGFLLADMAAAVESARATTLAAARRRDAGLP-------AGKAASI 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K         V  +A++  GG+GY ++  + R+ RE+    I  G+     L +   L 
Sbjct: 321 AKLVATDAVMKVTEDAVQVFGGAGYTKDYPVERYMREAKIMQIFEGTNQIQRLVISRHLA 380

Query: 460 KG 461
           +G
Sbjct: 381 RG 382


>gi|262371413|ref|ZP_06064730.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii
           SH046]
 gi|262313635|gb|EEY94685.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii
           SH046]
          Length = 379

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W++    P    L  +   +G  C      +        + +   +    A    
Sbjct: 24  PHYEQWEEECLIP--RQLWNQLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFTS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + +    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYIQNLGSEEQKQYWLPKMVTGE-------------VVTAIAMTEAD 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q     D  Y + G K F+S+ +    I+L A+         +  LL D 
Sbjct: 129 AGSDLQAIRTQAIPNQDH-YLVDGSKTFISNGIHADLIVLVAKTNPEARAKGISLLLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           S NG+   R   KIG  +  T EL F          LG+       +        L  ++
Sbjct: 188 SLNGVEKGRSLKKIGLHAQDTAELFFDQVKVPKNQRLGEEGQGFSYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y ++R   G  L      +  +A+  +   AA A   + A  +  
Sbjct: 248 MALGSILGAIELTSDYVQQRKAFGQPLSHMQNTRFVLANSQIKAKAAQAFVDQCAEQYSR 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                   A +       K +       VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 -------DALSVSHVAALKCFITDTQCDVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   +
Sbjct: 361 YGGTNEIMKEIVAREM 376


>gi|317125991|ref|YP_004100103.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590079|gb|ADU49376.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 382

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 132/364 (36%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A  R     GL    +   F    +     ++       A +     +S    +A  VA
Sbjct: 42  KATFRTLGAAGLLSLPYPEEFGGGGQPYEVYLQVVEEIASAWMSVAVGVSVHSLTAYPVA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T        P + S E                   L+E   G+DIA++T++     D
Sbjct: 102 TFGTDAQKAALLPGMLSGEQ-------------LGAYCLSEPLAGSDIASMTTRATPTGD 148

Query: 224 GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L G K W   +  +D +   A+     G   +   +      GL +   + K+G  
Sbjct: 149 GSYSLKGTKAWISHAGHADYYTTFART-ADTGSKGLSTFVVPADAAGLAFAAPERKMGLH 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----- 337
            +   ++ F      + G   +       M  L  LDS  + ++     LA+A       
Sbjct: 208 GDPVAQVMFDGV--VVDGARRIGEEGQGMMMALSALDSGRLGIAAGATGLAQAALDQAAT 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  RH  G  +     +   +AD+   + +A A     A   D  +  S+EAA A+++A
Sbjct: 266 YANERHQFGRPIASNQGLAFLLADMEAAVTSARATYLHAARLKDAGRPFSKEAAVAKLVA 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                     A  V  +A++ +GG+GY E+  + R+ RE+    I  G+     L +   
Sbjct: 326 -------TDAAMKVTTDAVQVLGGAGYTEDFPLERYLREAKVTQIFEGTNQIQRLVISRH 378

Query: 458 LEKG 461
           +  G
Sbjct: 379 VLAG 382


>gi|269928829|ref|YP_003321150.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269788186|gb|ACZ40328.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 586

 Score =  246 bits (628), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 75/432 (17%), Positives = 153/432 (35%), Gaps = 40/432 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+++    G   +     +  +   +                A    + +      +   
Sbjct: 65  LIQKLGELGPLGAEIPEEYGGLDLPKVVGAVITEEMAPTGGFAVTYGAHTGIGTLPLVYW 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    K + PK+ S E+                  L+E   G+D     ++    +DG 
Sbjct: 125 GTEEQKKKYLPKLASGEW-------------IAAYALSEPGSGSDALGARTRATLSADGR 171

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K F+S+   ++ F + A+V+G          L +    G+     + K+G ++
Sbjct: 172 HYLLNGTKQFISNSGFANLFTVFAKVDGEH----FTAFLVERDFPGVSLGPEEKKMGIKA 227

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T +L   N    +   LG++        ++            V   + +LA +  YA+
Sbjct: 228 SSTRQLILENAQVPVENVLGEIGKGHRIAFNILNFGRYKLGAGGVGAAKHALALSATYAK 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYARI--- 395
            R   G  +     +++ +A++A       +  +R     DEA +     +A  A I   
Sbjct: 288 ERRQFGRPIASFGAIQQKLAEMATRTYVTESAVYRTVGLIDEAIAGKTGTDAILAGIQEY 347

Query: 396 --MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                I K    +     + E ++  GG G++++  I R YR+S    I  G+     L 
Sbjct: 348 AVECSILKVLGTETMDYAVDEGVQIHGGYGFLQDFPIERAYRDSRVQRIFEGTNEINRLL 407

Query: 454 V----LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           +         KG     +    L+++L      +     D       ++     L +K+A
Sbjct: 408 IPEMLFRRALKGELPLMEAAGRLQEEL------LEPDFDDPEGPWAREEAQVANL-KKLA 460

Query: 510 LASSAAALYRAG 521
           L  +  A+ + G
Sbjct: 461 LMIAGLAVQKFG 472


>gi|323525673|ref|YP_004227826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323382675|gb|ADX54766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 382

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 130/366 (35%), Gaps = 32/366 (8%)

Query: 102 AW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           AW HA L+     G    +   ++            A   +         ++     +A 
Sbjct: 40  AWPHAELKALAELGFLGMLIPEAYGGAGASVLDFCIAQHEFAAVDAGLATIVHVHNFTAL 99

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T      + P              M +        LTE   G+D AA+ +   +
Sbjct: 100 TIVEHGTQEQKDRYLP-------------AMARGESIGAFLLTEPHAGSDTAALRTGAHR 146

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G K F+S+   +   I+ A  +   G       + D    G    R+++K+
Sbjct: 147 DGDH-YVLNGTKQFISNGSEAGVGIVFAITDKAAGKRGASTFIIDPKAPGYHVTRIESKL 205

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLA 333
           G  +  T ++   +   + +   N+        + ++       +  A +S    R +L 
Sbjct: 206 GQHTAHTAQIALED---YRVPAENLLGAEGNGYRTVMGGVSDGRIGIAFISAGVARGALD 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YAR R   G  L     +   +AD+A  +  A       A   D      +E    
Sbjct: 263 AALKYAREREAYGAPLNRLQAVAFDLADMAAQVEIAWQYCLHAARLRDAGIDCIKE---- 318

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K +  +MA  V +EA++  GG GY+ +  + R+ R+     I  G+ +   L 
Sbjct: 319 ---ASIAKLFASEMAEKVCSEAVQIHGGYGYLSDFPVERYLRDVRICKIYEGTSHIQKLI 375

Query: 454 VLNLLE 459
           +   L+
Sbjct: 376 ISRHLD 381


>gi|86156788|ref|YP_463573.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773299|gb|ABC80136.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 591

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 89/511 (17%), Positives = 182/511 (35%), Gaps = 48/511 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL-----------LRRSI 111
           EY++S   ++        T +        E++ + E  PA HAL           +R++ 
Sbjct: 9   EYLISEATKDDVFTPEDFTEEQRQIAETAEQFAETEALPAEHALEQHEPGVAAALMRKAG 68

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL       ++  +   +A  + AA    M    +    + +      +    T    
Sbjct: 69  DAGLLMIDAPEAYGGLALDKATSMLAAERMGMGGAFSVSYAAHTGIGTLPLVYYGTDAQK 128

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
             +  K+ + E+             A    LTE   G+D     +      DG  Y L G
Sbjct: 129 DRYLTKLVTGEW-------------AAAYCLTEPEAGSDAMGGKATATLSPDGKHYLLDG 175

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++   ++ F + A+V+           L + +  G+     + K+G + ++T  +
Sbjct: 176 TKQFITNGSFANLFTVFAKVD----RKHFTAFLVERTFPGVTVGPEEKKLGIKGSSTTSV 231

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +    +   LG++        ++  +             +++LA    YA  R   G
Sbjct: 232 IFESAKVPVENVLGEIGKGHKIAFNVLNVGRFKLGAAVTGAAKLALATGAAYANARKQFG 291

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSEEAAYAR 394
             +     ++  +AD A  + A+ +L +RLA   D+             ++  +      
Sbjct: 292 TPIARFGAIREKLADQAAGVYASESLIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYA 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I   I K +C ++   V+ E ++  GG G+I+E    ++YR+   N I  G+     L V
Sbjct: 352 IECAIAKVFCSEVLADVVDEVVQIHGGYGFIQEYPAEKYYRDERINRIFEGTNEINRLLV 411

Query: 455 LN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
              +L +       L   + + + +     +  +  ++    E   +A      + +A +
Sbjct: 412 PGTILRRALKGELPLQREVMKAMDALMNPSLDEVDPAVPFAAEKATVANLKRAFLVVAGA 471

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           A   Y   + D  +V L     D        
Sbjct: 472 AVQRYGEALKDEQEVLLA--LADVAIQAFAA 500


>gi|163793494|ref|ZP_02187469.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181296|gb|EDP65811.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 386

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 132/357 (36%), Gaps = 26/357 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPR 169
              GL+      ++  +      + R              L+  +V   S  + +  T  
Sbjct: 45  AEMGLYGVSIPEAYGGLGLSMVEEARLMMELGRTSPAFRSLIGTNVGIGSQGIVIDGTEE 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E             +     LTE   G+D A+I +  +K  +G     
Sbjct: 105 QKQSYLPRLASGE-------------LVGSFCLTEPEAGSDAASIRTSARKDGNGWILNG 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  +S  +    ++A+ +    G   +   L D    G+ Y +   K+G +     +
Sbjct: 152 TKRFITNSRRAGVLTVMARSDPDAPGSSGISAFLVDAKTPGISYGQPYRKMGQQGTHVAD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F +        +      G    MK+L    +  + + V   +  + E++ YA  R  
Sbjct: 212 VIFEDARVPADAVIGGVEGRGFKTAMKVLDRGRIHLSAVCVGIAQRLIEESLRYATDRQQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L D  +++  +AD   ++ AA +++   A  +            A + A   KY+ 
Sbjct: 272 FGSRLADFQLVQAMLADSQTEMYAARSMTLDAATLY-------ATEGKAPMEAACCKYYA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +M   V   A++  GG+GY+ + ++ R YR+     I  G+     + +   L K 
Sbjct: 325 SEMVGRVADRAVQIHGGAGYMADYAVERFYRDVRLFRIYEGTSQIQQIVIARNLVKA 381


>gi|89896113|ref|YP_519600.1| hypothetical protein DSY3367 [Desulfitobacterium hafniense Y51]
 gi|89335561|dbj|BAE85156.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 591

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 172/465 (36%), Gaps = 47/465 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              + ++   GL           +   +   +            A   M+ +      + 
Sbjct: 63  RDFMAQAGELGLLGLEVPEELGGMSMDKFSTVVVGEEIPRGASFAVAFMAHTGIGTLPIV 122

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP     + P + + E                   LTE   G+D     +     ++
Sbjct: 123 YFGTPEQKAKYLPGLATGE-------------KIAAYCLTEPGSGSDALGAKATAVLNAE 169

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++   +D F++ A+VEG++  F+V R     +  GL +   + K+G 
Sbjct: 170 GTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVER-----TMPGLSFGPEEKKMGI 224

Query: 282 RSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           + ++T ++   +    +   +G+L        ++  +     A  ++   +++L   + Y
Sbjct: 225 KGSSTRQVILEDVAVPVENIVGELGRGHVVAFNILNVGRFKLAAAAIGSAQLALEVTLKY 284

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-------KSRSEEAA 391
           A  R   G  L     ++   A+IA     A ++ +R A   +EA           +EA 
Sbjct: 285 AGERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVYRTAGLMEEACQDLDVTGDCRKEAG 344

Query: 392 YAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            A     I   + K    ++    + E ++  GG G+I E  I R YR+S  N +  G+ 
Sbjct: 345 KAIEEYAIECSLNKVLASEVLDLAVDEGVQIHGGYGFIAEYPIERMYRDSRINRLFEGTN 404

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL--- 504
               L V   L K       +   L   L ++ K V   L  S  L  E++GLA  L   
Sbjct: 405 EINRLLVPGTLLK-----RAMSGEL--PLLAAAKNVSKDL-MSAGLGSEEEGLAALLNMT 456

Query: 505 --TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              +K+ L ++  A    GM    + ++     +     + M  G
Sbjct: 457 QKAKKLCLMAAGIAAQNLGMELKDNQYVLLGLAEMVLQVYAMESG 501


>gi|298243655|ref|ZP_06967462.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297556709|gb|EFH90573.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 596

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 75/416 (18%), Positives = 159/416 (38%), Gaps = 41/416 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL+++   GL       ++          +  A     A          ++ S   +   
Sbjct: 69  LLKKAGEQGLLMIEIPEAYGGAELGLLTSVLVASQQKEASFSVAFGAHTTIGS-LPIVYY 127

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    + + PK+ + E+                  LTE   G+D   + ++ +   DG 
Sbjct: 128 GTEEQKQAYLPKLATGEW-------------IAAYALTEPGVGSDAMGLGTRAELSEDGK 174

Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K W  ++  +D F++ A++            + + +  G+     +NK+G + 
Sbjct: 175 YYILNGTKQWISNAGFADVFVVFARIGNERP----SAFIVEANWPGVTTGPEENKMGIKG 230

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T +L   +       LLG+++       ++  +  L     +V G R +L  A  Y  
Sbjct: 231 SSTRQLILQDVKVPTENLLGEIHKGYKIAFNILNIGRLKLGAGTVGGARNALKLAATYTN 290

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI----- 395
            R   G  L +  ++K+ +A +A +  AA +  FR A +   A+    +   A       
Sbjct: 291 ERKAFGKFLHEFGMIKKKLARMAAETYAAESEVFRTAANISNAQHSGGDNTDAIFKAVED 350

Query: 396 ---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A + K    ++   V+ E ++  GG G+++E  I + YR++    I  G+     +
Sbjct: 351 YAIEASLAKVHGSEVLAMVVDEGVQIFGGYGFMKEYPIEKAYRDARIQRIFEGTNEINRM 410

Query: 453 ----DVLNLLEKGTNLFEQLFSTLEQDLGS------SGKKVITILRDSISLCKEDK 498
                +     KG      ++  +E  + +      + + V   LR++++  +  K
Sbjct: 411 VASGTLFRRAMKGQVSLMTIYPQVEGRIKANEPSNGADENVPAELREAVNTLERSK 466


>gi|260591324|ref|ZP_05856782.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319]
 gi|260536690|gb|EEX19307.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319]
          Length = 577

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 93/496 (18%), Positives = 172/496 (34%), Gaps = 56/496 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++ +   GL      R +  +          + L   A     ++ S        +  
Sbjct: 93  ENIQATRQAGLWGVSMPRQYGGLNLPNVVFSMLSELIAAADAGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
                  + + P+I + E               + + LTE   G+D+  +  +      +
Sbjct: 152 FGNDDQRQRYIPRICAGE--------------TMSMDLTEPDAGSDLQRVMLKATFDEKE 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G  
Sbjct: 198 NCWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRNGGVDVRHIENKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G+  +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGNTRMGLIKYVMALMNGARLGIAAQSVGLEQEAYNEGLAYAKE 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---------- 391
           R   G  +I  P +   ++ +   + A  +L ++ A   D  K+  + A           
Sbjct: 318 RAQFGKKIITFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIARGQKLTPEERQ 377

Query: 392 -------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +A+   GGSG+I E    R YR++   SI  
Sbjct: 378 EMKKYTRLADAFTPLAKGINSEYANQTAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNLF---EQLFSTLEQDLGSSGKKVITILRD----------SI 491
           G+    V+  +  +  GT L    E L   L  D   + +  +  L +          + 
Sbjct: 438 GTTQLQVVAAIRYITNGTYLSIMKEMLEGELACDCMKALRDRVARLVELYEESIERVNAY 497

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMND------IADVFLENRFLDNCHSTHCML 545
                   LAR L    A    +  L              A+VF+  R  +     H   
Sbjct: 498 DNQDVHDFLARRLYNMTADIIGSLLLIEDASKAPELFKKSANVFV--RMAEEEVIGHASY 555

Query: 546 HGRFNAAHIIDSLYLD 561
              F+ A + +   +D
Sbjct: 556 IKSFDPADLANFKAMD 571


>gi|300934074|ref|ZP_07149330.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 390

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 144/376 (38%), Gaps = 22/376 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW    +      L +++   GL   +    F        ++  A     +A  ++
Sbjct: 31  PNVERWHDQGYCD--RDLYKKAGQQGLLGVMAPEEFGGGGMGNDYRFNAILSEELANADS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +         +V + T   +   +  +  + +       P+        L +TE   G
Sbjct: 89  GSV---------IVGIQTINDLVIPYLTRFGNDDQKERFLKPLCAGDKIAALAMTEPGAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            D+A I S  +K  +G Y L+G K F+S+ + +D  +++A      G   V  L+ +   
Sbjct: 140 ADLAGIRSFARKDENGDYILNGSKTFISNGVQADFTLVVAVTNPEAGRAGVSMLIIEDGM 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G        K+G +S  T EL F +       LLG+   + G +        L  A+ S
Sbjct: 200 EGYTKTGPLKKVGLKSQDTAELSFEDVRIPKENLLGEEGAAFGYLRTNLAQERLSIAVGS 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  R +      +++ R   G  LID    +  +A +A  I AA +         D A 
Sbjct: 260 IATSRRAFDLVYKHSQDRKTFGNRLIDHQAYRWELAKMATSIQAAQSFV-------DAAI 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E     +   + KY   ++   V+  A++  GG G++ E  IA HY +S    I  
Sbjct: 313 MEKVEGNLDEVTGAMAKYHTTELQIEVVNTALQLHGGYGFMMEYPIATHYLDSRVQPIYG 372

Query: 445 GSGNAMVLDVLNLLEK 460
           G    M+  +   L K
Sbjct: 373 GPNEIMIEIISRRLAK 388


>gi|324511917|gb|ADY44949.1| Medium-chain specific acyl-CoA dehydrogenase 10 [Ascaris suum]
          Length = 418

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 109/310 (35%), Gaps = 13/310 (4%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                 +  +  T  + +       S E        M +  +     +TE   G+D++ I
Sbjct: 102 GYGCTGIATVFMTNDLAETPLIVAASEEVKKKYLGRMTEEPLIAAYAVTEPNAGSDVSNI 161

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLC 271
            ++ +K  D         W  ++  ++ + +L + +              + +    G+ 
Sbjct: 162 KTKCEKKGDEYIINGSKMWITNAGPANWYFVLCRSDPNPKAPTSKAFTAFVVEADSPGIT 221

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVS--GM 328
             + +  +G  ++ T  L F +        +     G V  M+       A+  ++    
Sbjct: 222 KGKKEKNMGQHASDTRGLTFEDVRVPASNMVGPPGEGFVVAMRTFDRTRPAVAGLATGLQ 281

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L EA  YA  R   G  + +   +   +AD+A+++  +  +++R A        R  
Sbjct: 282 ARCLDEASKYALERKTFGIPIANHQAVATMLADMAINMELSRMITYRCAWEVMSGVPRG- 340

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                   + + K +    A    + A++ +GG+GY  E  + +  R++    I  G+  
Sbjct: 341 ------YYSSMAKCFAADSANIAASNAVQILGGNGYNSEYPVEKLMRDAKLFQIYEGTCQ 394

Query: 449 AMVLDVLNLL 458
              + V   L
Sbjct: 395 IQRVVVSRNL 404


>gi|307295297|ref|ZP_07575136.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878800|gb|EFN10019.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 389

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 126/368 (34%), Gaps = 30/368 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            HP    L +++   GL        +  V       +               +   +   
Sbjct: 46  VHP---DLWKKAGAAGLLGLSVPEEYGGVGADFRFDVVLMEQLGFKHALNFAIPLHNAVV 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    T    + W P + +                 + + ++E   G+D+  + +  
Sbjct: 103 APYIVSYGTETQKRRWLPGVVTG-------------DTILAVAMSEPAAGSDLQGMRTTA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLK 276
            K  D  Y ++G K F+S+       I+ A+ +   G   +    +E     G    RL 
Sbjct: 150 VKDGDE-YIINGQKTFISNGAHASLIIVAAKTDPVAGGRGISLFGVETDKVEGFTRGRLL 208

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI----LIYLDSAIMSVSGMRVSL 332
           +K+G     T EL FS+        L    G    M +       L  A  +++ M  +L
Sbjct: 209 DKMGQEGRDTAELFFSDMRVPAENLLGGVEGAGFAMLMEKLPQERLVIAWQAMAMMETAL 268

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R   G  ++D    +  +A+       A                 + +AA 
Sbjct: 269 NLTVEYVSERKAFGKAVMDFQNTQFKLAEAKTLATVAKVFLNHCTEQLLAG---TLDAA- 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A + KYW  +    VI E ++  GG GY+ E  IA  Y+++ A  I  G+   M L
Sbjct: 325 ---TASMAKYWITEAQAKVIDECLQLFGGYGYMNEYPIAEMYKDARAYRIYGGANEIMKL 381

Query: 453 DVLNLLEK 460
            +   L++
Sbjct: 382 LIARSLKQ 389


>gi|116694436|ref|YP_728647.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
 gi|113528935|emb|CAJ95282.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha
           H16]
          Length = 400

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 66/409 (16%), Positives = 143/409 (34%), Gaps = 28/409 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           ++  +A++ A +A+     L    P     D+ +  P    ++ +    GL       ++
Sbjct: 1   MIRDSARQQALLADIRRFVLETCIPLEAEIDRTDVIPE--PVVEQMRRLGLFGHSIPEAY 58

Query: 125 EPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                  +   +    +   A +        +  ++  +    T    + + P++ S   
Sbjct: 59  GGAGLTTEELALVNIEVSQAATVFRARFGGNTGIASESLVADGTEAQRQRYLPQLASG-- 116

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       V     LTE   G+D  ++ +  ++  D         +  ++P++D F
Sbjct: 117 -----------KVTGCFALTEPEAGSDATSLQTTARQDGDHYVLNGSKCFITNAPIADLF 165

Query: 244 IMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----L 298
            + A+      G   +   L +    GL     + K+G   +   ++   +        +
Sbjct: 166 TVFARTNPDTPGAHGISAFLIERGTPGLSTSEPERKMGQHGSPVGDVYLKDCRVPASAIV 225

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G  NV             ++ A + V      + E + YA +R   G  + D  ++++ 
Sbjct: 226 GGKPNVGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGKPIADYQLVQQM 285

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD   ++ AA AL    A   D  +  + EA+         K +  +M+  V   A++ 
Sbjct: 286 IADSNTELHAARALVLDTARKRDAGEDVTMEASM-------CKLFASEMSGRVADRAVQV 338

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            GGSGY+      R YR+     +  G+     L++     +      +
Sbjct: 339 FGGSGYMARTVAERFYRDVRLFRLYEGTTQIHQLNIARRTMEARGAALE 387


>gi|296474629|gb|DAA16744.1| acyl-CoA dehydrogenase family member 9, mitochondrial [Bos taurus]
          Length = 520

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 84/460 (18%), Positives = 165/460 (35%), Gaps = 50/460 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R A +  +    A  L
Sbjct: 84  RKIDQEGKIPD--ETLEKLKSLGLFGMQVPEEYGGLGLSNTMYARLAEVIGLDASIAVTL 141

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +      + P++ S E+                  LTE   G+D 
Sbjct: 142 AAHQSIGLKGIILAGSKEQKARYLPRLASGEH-------------VAAFCLTEPASGSDA 188

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++    +D   Y L+G K W  +  +++ F + A+      +G V    +   + +
Sbjct: 189 ASIRTRATLSADKSHYVLNGSKVWVTNGGLANVFTVFAKTEVVDSDGSVKDK-ITAFIVE 247

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
               G+   + ++K+G R + T E+ F NT   +    NV        K+ +  L+S   
Sbjct: 248 RDFGGVTNGKAEDKMGIRGSNTCEVHFENTRVPV---ENVLGEVGGGFKVAVNILNSGRF 304

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+  M        +     YA  R      L +  +++   + +A       ++++  A 
Sbjct: 305 SMGSMVAGMLKKLIEMTAEYACTRKQFNRNLSEFGLIQEKFSLMAQKAYVMESMAYLTAA 364

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D             I A + K +  + A   ++EA++ +GG GY+ +    R  R+S 
Sbjct: 365 MLDAPGFPD-----CSIEAAMVKVFSSEGAWTCVSEALQILGGLGYMRDYPYERLLRDSR 419

Query: 439 ANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKE 496
              I  G+   + + + L  L+    +       L++ ++ +    V   LRDS+    +
Sbjct: 420 ILLIFEGTNEILRMYIALTGLQHAGRILTARVKELKRGNVTTIMDTVGQRLRDSLGRTVD 479

Query: 497 ----------DKGLARFLTEKIALASSAAALYR-AGMNDI 525
                        LA  + E++ L   A  L    GM  +
Sbjct: 480 LGLTGKLGVVHPSLATIVEEQLVLKRVANVLINLYGMTAV 519


>gi|325001924|ref|ZP_08123036.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 386

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 132/382 (34%), Gaps = 35/382 (9%)

Query: 84  LHAYGPGGER--WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARL 140
           L  +    E    D+         + R +   GL        +    V    +       
Sbjct: 31  LPHHDRWEEEGQVDR--------EIWRTAGAAGLLGMGVPEEYGGGGVDDFRYNAVLDEE 82

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            + A          +         +      + W P   S               +   +
Sbjct: 83  IVAAGTSGIGFPLHNDVVQPYFLRLANEEQKQRWLPGFCSG-------------DLITAI 129

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+  I +  ++ +DG + L+G K F+++ + +D  I++A+ +         
Sbjct: 130 AMTEPGTGSDLQGIATNAKQDADGDWILNGSKTFITNGILADLVIVVAKTDPDAKHLGFT 189

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI-- 316
             + +    G    R   K+G ++  T EL F++        L  V  G V  M+ L   
Sbjct: 190 LFVVERGMEGFERGRRLKKVGMKAQDTAELSFTDVRVPDANRLGEVGQGFVYLMQNLAQE 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ S +G   ++   + Y + R   G  + +    +  +A++  + + A     R 
Sbjct: 250 RLSIAVASAAGAEAAVRMTLEYTKDRKAFGRPVSNFQNTRFELAEMDTEASIARIFVDRC 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                       E+  +   A   K+W   +   V+   ++  GG GY+ E  IAR + +
Sbjct: 310 IRQH-------VESELSVPDAAKAKWWTSDLQNRVVDRCVQLHGGYGYMLEYPIARAFVD 362

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           S   +I  G+   M   +   L
Sbjct: 363 SRVQAIYGGTNEIMKEIIGRSL 384


>gi|194375021|dbj|BAG62623.1| unnamed protein product [Homo sapiens]
          Length = 291

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 21/293 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G+D+A I ++ +K  D         
Sbjct: 1   MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 60

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 61  WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 120

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     K+ +          A  +V   + +L EA  YA  R 
Sbjct: 121 VFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERK 177

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 178 TFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKAF 230

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 231 AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 283


>gi|157693692|ref|YP_001488154.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157682450|gb|ABV63594.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 593

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 167/498 (33%), Gaps = 47/498 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER---------WDKVEFHPAWH 104
             +E++  G +++  T  E        + +    G   E           D++E H   H
Sbjct: 3   AMEEVKKGGSFLIDETNYEHIFTPEDFSDEHQMIGKTTEDYILQDVVPYIDQIEKHEFEH 62

Query: 105 --ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              LL+++   GL  +     F  +   +         +  A   +    +     +  +
Sbjct: 63  SVRLLKKAGELGLLGADVPEEFGGLGLDKISSAIITEKFSRAGSFSLSYGAHVGIGSLPI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L       + + P + S E                   LTE   G+D     +      
Sbjct: 123 VLFGNQAQKETYLPGLASGE-------------TIAAYALTEPGSGSDALGAKTTAVLNE 169

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G  Y L+G K W  +S  +D F++ A+++G          + +    G+     + K+G
Sbjct: 170 AGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH----FSAFIVEKDFPGVKTGPEEKKMG 225

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +        L     G V    IL       A+ +V   +  +  +  
Sbjct: 226 IKGSSTRTLILEDAQVPKENLLGEAGRGHVIAFNILNIGRYKLAVGTVGASKRVIQLSAE 285

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------------EAKS 385
           YA +R      +    ++   +A+++  + A  +  +R    F+            + K 
Sbjct: 286 YANQRKQFQTPISRFSLIGEKVANMSAKLYAMESAVYRTVGLFEQRMGLLSEEDQKDGKQ 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++  A   I   + K    +    +  E ++  GG G+++E  + R YR+S  N I  G
Sbjct: 346 IAQSIAEYAIECSLCKVLGSETLDYIADEGVQIHGGYGFMQEYEVERAYRDSRINRIFEG 405

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     L V     K     E       Q L      ++        L +E   LA    
Sbjct: 406 TNEINRLLVPGTFLKKAMKGELPLLQKAQTLQEELMMMMPEEPGDQPLDQEKYLLA--HA 463

Query: 506 EKIALASSAAALYRAGMN 523
           +KIAL  S  A  + G  
Sbjct: 464 KKIALMVSGMAAMKYGKA 481


>gi|328545114|ref|YP_004305223.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414856|gb|ADZ71919.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 384

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 77/403 (19%), Positives = 143/403 (35%), Gaps = 25/403 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   + +A  A           P     D+ E   A+ A L+     G        
Sbjct: 2   DFNLSEEHRLMAETARRLAE--DRLAPLAATLDRGEGRQAFLANLKELADAGFMALNVSA 59

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           ++            A           G  +S +     ++  + +      + PK+    
Sbjct: 60  AYGGTEAGSVAFALAVEALGRGCAATGVTVSVTNMVGEVIQAVGSEEQKAAYLPKLADGR 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           Y             A G  LTE   G+D A + ++  +  D         +  S+  +  
Sbjct: 120 YP------------AGGFCLTETGAGSDPAGMKTRAVRDGDHYVLNGAKLYITSAEYAGI 167

Query: 243 FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           F++ A  +        +   L +    GL   + + K+G   +AT E+ F +       L
Sbjct: 168 FVVWAVTDPDAAKGKGISCFLVETGTPGLVIGKAETKMGQTGSATNEVLFQDCRVPATAL 227

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G  N              +  A +S+   R ++  A  YA+ R   G  L D   ++  
Sbjct: 228 MGPENAGFKVAVGELAGGRIGIAALSLGIARAAMEAAKAYAKERRQFGTALADMQGLQWM 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD   ++ AA  L  + A   D+ +S ++EA+ A       K +  + A      A++ 
Sbjct: 288 IADRETELEAARLLVLQAAWLKDQGRSFAKEASMA-------KLYASEAAQRATYTALQI 340

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG+GYI +  + R  R++   +I  G+     L +   + K 
Sbjct: 341 HGGAGYIRDYPLERFARDARITTIYEGTSEIQRLIIAREVLKA 383


>gi|254487928|ref|ZP_05101133.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101]
 gi|214044797|gb|EEB85435.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101]
          Length = 383

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 133/377 (35%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+     P      +++   G+  +     +  + +     I  +          
Sbjct: 30  PHMADWNAAHQVP--PETWKQAGALGMLNAWLAEEYGGIGQGILFDIIVSEELGRIGATG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S+     +    +  +     P++ S                   + +TE   G
Sbjct: 88  PGFSLHSLIVTPYINNRGSDELKARILPRMVSG-------------DAIGAVAMTEPGTG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSP 267
           +D+AAI ++ ++  +G + ++G K F+++  +   ++ A   +   G   V   + +   
Sbjct: 135 SDLAAIKTRAERHGNG-WKINGQKTFITNGQNADVVVTACVTDPSKGAKGVSLFVIEREM 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R   KIG   N T EL F + F     LLG+ N     + +      L  ++  
Sbjct: 194 AGFSRGRNLRKIGQHGNDTAELFFEDVFVPGENLLGEENKGFYYLMEELAQERLLISVQC 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +    +    + Y   R   G  ++D    +  +A +  ++ A  A    L       K
Sbjct: 254 QARAEAAFEMTVDYVNERKAFGKKILDFQNTRFVLAGLKAELMAGRAFCDALIALRLAGK 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + +       A   K +  ++   V+ + ++  GG GY+EE  IA+ + ++    I  
Sbjct: 314 LDAVQ-------ASAGKLYHSELLGRVVDQCLQLFGGYGYMEEYPIAQAFVDARIERIYA 366

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+   M   +   L+K 
Sbjct: 367 GTSEIMKEIIGRSLDKA 383


>gi|257075763|ref|ZP_05570124.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 550

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 102/507 (20%), Positives = 207/507 (40%), Gaps = 43/507 (8%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N Y  D     ++ +F    H  L  LG Y      +    +   + P    +   G+
Sbjct: 15  GKNHYDIDKPFQKIL-DFYMGKHLNLSPLGAYAGKDLYETTDYIDKVSQPLQKMWSIDGK 73

Query: 93  RWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R D +   P    +L + IH+ G+          P    ++     A  YL+A      +
Sbjct: 74  RIDSILISPMEKHVLDKLIHEYGI--------SRPYFHGKSIMEHYAMGYLVADPGIYCI 125

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +  +A  +     P    D+ P +              K ++      TE +GG+D+
Sbjct: 126 LTLTHQTAYAIHKYA-PDFQNDYVPGLIG----------DTKDTLLGATWFTEIQGGSDL 174

Query: 212 AAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG- 269
            A  ++ +   +G++ L+G K+F  ++ ++D  +  A      G   +   L     N  
Sbjct: 175 GANKTRAE-SGNGLWYLTGDKYFASNAGLADVALTSAFHGDNHGAKGLSLFLIPRKNNDG 233

Query: 270 ---LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +RLK K   +S  + E+E  ++  +++GD   +   + +  ++  LD+A  +  
Sbjct: 234 ELNYRLRRLKEKSATKSVPSGEVELDSSEAYMIGDAGKAIYYITEDLMVSRLDNAAAACG 293

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-- 384
             R +  EA +Y  +R   G +LI+ P + + + D+ + +  + AL+F+    F+ +   
Sbjct: 294 IARKAYLEAYYYTGKRKTFGKLLIEHPGIVKDLLDMEVLLEGSIALTFKSIELFNNSINS 353

Query: 385 --SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E  Y R+M  I K      +  +   A E  GG G++ E  + R +RE+    I
Sbjct: 354 KPPYDDEYNYTRLMTHIVKNITADSSARITQMATELHGGIGFLSEFPVERWHREALITPI 413

Query: 443 LLGSGNAMVLDVLNLLEKGTNL------FEQLFSTLEQDLGSSGKKVITILRDSISLC-- 494
             G+ N   LD+L  + +          F+ + S + ++  ++ +     L++SI     
Sbjct: 414 WEGASNIQALDMLEAIMRKKAHIKLLSDFKNILSEIREEK-AAAESCYNSLKNSIDNLLS 472

Query: 495 ---KEDKGLARFLTEKIALASSAAALY 518
              +E +  A++  E +  + +A  L 
Sbjct: 473 MGVEEAQFHAKYSMEVMGHSMAAILLI 499


>gi|12857969|dbj|BAB31161.1| unnamed protein product [Mus musculus]
          Length = 375

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           +                +          S      +A
Sbjct: 32  REVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIA 91

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + +                 + +TE   G+D+  + +  ++   
Sbjct: 92  NYGTKEQIEKFIPQMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKRSGS 138

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++   SD  I++A    E R     +   L +    G    R  +K+G
Sbjct: 139 D-WILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMG 197

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 198 MKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRN 257

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 258 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHETKRLDSGSA 310

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  E ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 311 SMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQ 370

Query: 458 L 458
           +
Sbjct: 371 I 371


>gi|21242313|ref|NP_641895.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107744|gb|AAM36431.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 382

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 148/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPVEYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I        
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAI-------- 114

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                 + +      LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 115 -----AEGAHIGAFALTEPQSGSDASAMRCRAVKQADGSFLINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 170 FAMTEPDKGSRGITAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVE 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 230 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 288 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 341 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|86131806|ref|ZP_01050403.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817628|gb|EAQ38802.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 394

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 142/357 (39%), Gaps = 24/357 (6%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           + ++    G     +   +  +             Y +  LE    ++    +A   A+ 
Sbjct: 42  IWKKFGDMGFFGIAYPEEYGGMNLDF--------FYTVILLEELQKINSGGFAA---AIW 90

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
               +                  AP         L +TE  GG+D+A + +   K  D  
Sbjct: 91  AHAYLAMTHLNAEGDMRIKSEYLAPSIAGDKIGCLCITEPFGGSDVAGMRTTAVKEGDH- 149

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G K F+++ + SD  ++ A+    +G   +   L D    G+   +L +K+G R++
Sbjct: 150 YIINGSKTFITNGVYSDYLVVAAKTAPELGGKGMSIFLLDRDMPGINATKL-DKLGWRAS 208

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F N       L+G+ N   G +        L   I + +    ++  A+ Y + 
Sbjct: 209 DTGEISFDNVKVPAENLMGEENAGFGYIMQHFASERLIMGINAHARAEYAIEYALGYMKE 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +A+   ++  + A ++ +A+     +   +EA  +++ A    
Sbjct: 269 RTAFGVTIDKFQALRHKLAERTAEVEMSKAFNYTVAHRLGNGEYVVKEATMSKLTA---- 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               K+A  VI + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++
Sbjct: 325 ---TKIADEVIYDCLQMLGGYGYMEEYPLARMLRDSRLGPIGGGTSEILREIIAKMV 378


>gi|295133017|ref|YP_003583693.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294981032|gb|ADF51497.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 390

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 149/362 (41%), Gaps = 38/362 (10%)

Query: 102 AWHALLRRSIHDGL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
            +  L +   + GL     +   F   ++K      AA ++  A L   H          
Sbjct: 47  GYFGLYQPEEYGGLDLDIFYTIIFLEELQKINSGGFAAAMWAHAYLAMTH---------- 96

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            V +  +  +   +     S E                 L +TE  GG+D+A + S  +K
Sbjct: 97  -VKVEASEELKAKYLTPSISGE-------------KIGALCVTEPFGGSDVAGMRSTAEK 142

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G K F+++ + +D  ++ A+    +    +   + + +  G+   +L NK+
Sbjct: 143 KGD-TYILNGSKTFITNGVYADYLVVAAKTSPELKSKGMSIFIVNRNAKGVSASKL-NKL 200

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R++ T E+ F N       +LG+ N     +     +  L   + + +    +L  AI
Sbjct: 201 GWRASDTGEIAFDNVEIPASNMLGEENKGFSYIMQHFAMERLIMGVNAHARAEFALDYAI 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y   R   G  + +   ++  IAD+  ++      ++  A    + +   +EA+ ++++
Sbjct: 261 NYMNEREAFGKKINEFQALRHKIADMVSEVTVIKEFNYATAYKLGKGEYPVKEASMSKLL 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    K+A  VI  +++ +GG GY+E+  +AR +R+S    I  G+   +   +  
Sbjct: 321 -------STKIADEVIYGSLQMLGGYGYMEDYPLARMFRDSRLGPIGGGTSEILREIIAK 373

Query: 457 LL 458
           ++
Sbjct: 374 MV 375


>gi|218780484|ref|YP_002431802.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761868|gb|ACL04334.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 601

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/480 (18%), Positives = 175/480 (36%), Gaps = 59/480 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH-LMSP 154
           +V    ++                 D                 R YL           + 
Sbjct: 71  EVLVPESFKKAFDLIREGDWTAMNEDPDLGGQGTPYLINFPT-REYLWGGNYCLVNYATM 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +  M+    + +    +  K+++ ++  T             + LTE   G+D+ A+
Sbjct: 130 GHGTGKMIEAFGSQKQKDLFLEKLYTAQWGGT-------------MLLTEPEAGSDVGAL 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+   K  DG Y +SG K F+++            +LA+VEG       +  F+VP+   
Sbjct: 177 TTTAVKNEDGTYSISGAKIFITNGEHQLTENIVHPVLARVEGAPEGTKGISIFIVPKYWV 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    ++ K+G   +AT  L         G LLG        +  M   
Sbjct: 237 NEDGSMGDFNDVVCTGVEEKMGIHGSATCSLTLGGAGKCRGLLLGQECEGMKIMFHMMND 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GG-----ILIDQPVMKRAIADIALD 365
             L+    + +    +   A +YA+ R        G       +I+ P ++R +  +   
Sbjct: 297 ARLNVGFQAFTYASSAYLYACNYAKERIQGKDLTAGKNSPSVTIINHPDIRRMLTWMKAH 356

Query: 366 IAAATALSFRLANSFDE--AKSRSEEA----AYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +    +  +  A+ FD   A+  S++A           P+ K +  + +  V   AM+  
Sbjct: 357 VDGMRSFIYYTASLFDWMKAEPDSDQAQNRQDLIDFFIPLVKGYSAQRSFDVCVNAMQVY 416

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG GY +E  I +  R+    SI  G+     +D+L   L  +G  LF+   + +   + 
Sbjct: 417 GGYGYTKEYPIEQLLRDCKITSIYEGTDGIQAMDLLGRKLQMRGGALFQAFANEVNSCIT 476

Query: 478 SSGK-----KVITILRDSIS-LCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIADVFL 530
           ++ +      +   L ++++ L +  + L++ L   +   S A+A  +     D+   ++
Sbjct: 477 AALEVPELSAMADRLANALACLGETAQSLSKNLATPLIKTSFASAFPFMEATGDVIMAWM 536


>gi|57997529|emb|CAI45986.1| hypothetical protein [Homo sapiens]
          Length = 454

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 108/293 (36%), Gaps = 21/293 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G D+A I ++ +K  D         
Sbjct: 164 MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGPDVAGIKTKAEKKGDEYIINGQKM 223

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 224 WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 283

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     K+ +          A  +V   + +L EA  YA  R 
Sbjct: 284 VFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATRYALERK 340

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 341 TFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKAF 393

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 394 AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 446


>gi|47522686|ref|NP_999063.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Sus scrofa]
 gi|13878316|sp|P79273|ACADS_PIG RecName: Full=Short-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA
           dehydrogenase; Flags: Precursor
 gi|1695727|dbj|BAA13964.1| short-chain acyl-CoA dehydrogenase [Sus scrofa]
          Length = 413

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 136/380 (35%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P   A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHRFPE--AQVKKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS +        L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSG-------------DKVGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A  +  Q   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G R+++T  L F +     +   N+   P    KI +  LD   + ++
Sbjct: 220 AGLTLGKKEDKLGIRASSTANLIFEDCR---IPKENLLGEPGMGFKIAMKTLDMGRIGIA 276

Query: 327 -----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                  + +L  A++YA  R   G  L     ++  +AD+AL + +A  L++R A   D
Sbjct: 277 SKALGISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALESARLLTWRAAMLKD 336

Query: 382 EAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             K    +E A A++ A        + A A+  +A++ +GG GY+ E    RHYR++   
Sbjct: 337 NKKNPFIKEPAMAKLAA-------SEAATAITHQAIQILGGMGYVTEMPAERHYRDARIT 389

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     L +   L K
Sbjct: 390 EIYEGTSEIQRLVIAGHLLK 409


>gi|72161914|ref|YP_289571.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915646|gb|AAZ55548.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 382

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 149/384 (38%), Gaps = 33/384 (8%)

Query: 84  LHAYG-PGGERWDKVEFHPAWHALLRRSIHDGLHC----SIWDRSFEPVVRKQAHKIRAA 138
           L  +  P   RW+          L R++   G       + +    EP  R  A      
Sbjct: 21  LRRHAVPHYARWEAEGIVD--RELWRQAGRAGFLGTAIPAAYGGGGEPDFRYNAILTEEC 78

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
               M  L +G  +   V +  +++L  +    + W P + S               +  
Sbjct: 79  ARAGMLSLSSGFGVHNDVVTPYLLSL-ASEEQKQRWLPGLCSG-------------DLVT 124

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
            + +TE   G+D+ A+ +   +  D  Y L+G K F+++ + +D  I++A+ +       
Sbjct: 125 AIAMTEPGAGSDLKAVRTTAVRDGD-SYVLNGTKTFITNGIHADLVIVVAKTDPSAQARG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +  ++ +    G    R   K+G  +  T EL F +       LLG+ N   G +     
Sbjct: 184 ISLVVVERGMPGFRRGRNLAKVGLHAQDTAELVFEDVRVPAANLLGEENQGFGYLMRNLP 243

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+++V+  R ++   I Y R R   G  +      K  +A++A ++  A     
Sbjct: 244 QERLSIAVIAVAAARAAVEWTIRYCRERTAFGQEIGRFQHNKFQLAEMATEVDIAQTYVD 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R   + +  +    +AA A+        W  ++        ++  GG GY++E  I+R +
Sbjct: 304 RAVLAHNAGRLSPVDAAKAKW-------WTTELLKRTADTCLQLHGGYGYMDEYPISRLW 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++  ++I  G+   M   +   L
Sbjct: 357 RDARVHTIFGGTTEIMKEIIGRDL 380


>gi|311896088|dbj|BAJ28496.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 396

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 141/389 (36%), Gaps = 47/389 (12%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           GE +++ EF    + ++R     GL    +   +  +     A  +    L  +    A 
Sbjct: 30  GEYYEQNEFP---YEIIREMGRMGLFGLPFPEEYGGMGGDYFALCLVLEELARVDSSVAI 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  + L  T    ++W PK+ S E             V    GLTE  GGT
Sbjct: 87  TLEAAVSLGAMPIHLFGTEEQKREWLPKLTSGE-------------VLGAFGLTEPEGGT 133

Query: 210 DIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDA---FIMLAQVEG----------RVGC 255
           D  A  +  +       + ++G K F+++  +D      + A  E               
Sbjct: 134 DAGATRTTARYDEATDEWVINGSKCFITNSGTDITGLVTVTALTEPLTHSSDGSSNHSPT 193

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI 314
             +  ++      G    +  +K+G  ++ T EL F++        L     G  + ++I
Sbjct: 194 REISSIIVPTGTAGFQVSKKYSKVGWNASDTRELSFTDCRVPAANLLGRQGRGYAQFLRI 253

Query: 315 LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
              LD   ++++ +   LA+        YA  R   G  +    V++  +AD+      +
Sbjct: 254 ---LDEGRIAIAALATGLAQGCVDQSVQYAGTRRAFGRPIGANQVIQFKLADMETRAHIS 310

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
                  A+    A+   +EAA       I K +  + A     EA +  GG G++ E  
Sbjct: 311 RLAWRDAASRLLHAEPFKKEAA-------IAKLYASEAAVDNAREATQIHGGYGFMNEYP 363

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           +AR +R+     I  G+     + +   L
Sbjct: 364 VARMWRDCKILEIGEGTSEVQRMLIAREL 392


>gi|312197807|ref|YP_004017868.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311229143|gb|ADP81998.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 138/408 (33%), Gaps = 38/408 (9%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
             + S  A+EL  +A      +L       +   +  F      + R     GL    + 
Sbjct: 5   RLLPSDEARELVELAAEICAKELEP--RTAQDEAEARFP---REVFRTLGQAGLLSLPYP 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             F    +     ++               +S    S   +A   TP+   +  P++ + 
Sbjct: 60  ERFGGGEQPYEVYLQVLEEIAYRSASVAVGVSVHSLSCYPLATFGTPKQQAEHLPRMLAG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSP 238
                         +     L+E   G+D AA+ +                   W     
Sbjct: 120 -------------DLLGAYCLSEPHAGSDPAALRTTATPPTTTGGDYVLSGTKAWVTHGG 166

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +D + + A+     G   +   L D S  GL     + K+G  ++ T ++ F +     
Sbjct: 167 AADFYTVFART--GEGRGGISCFLVDASTPGLIVYPPERKMGLTASPTTQIGFEDAPVAD 224

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353
              + V    +     L  LDS  + ++     LA+     AI YAR R   G  +ID  
Sbjct: 225 SRLVGVPGQGLP--IALSALDSGRLGIAAAATGLAQRALDDAIAYAREREAFGRPIIDHQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+A  + ++ A     A   D  +  S+        A I K      A  V  
Sbjct: 283 GLGFLLADMAAAVESSRATMLTAARLRDAGRPFSKA-------ASIAKLVATDAAMKVTE 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +A++  GG+GY ++  + R+ RE+    I  G+     L +   L + 
Sbjct: 336 DAVQVFGGAGYTKDYPVERYMREAKVMQIFEGTNQIQRLVISRHLARA 383


>gi|239941428|ref|ZP_04693365.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239987893|ref|ZP_04708557.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291444871|ref|ZP_06584261.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291347818|gb|EFE74722.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 386

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 151/409 (36%), Gaps = 41/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 2   DHRLTAEHEELRRTVEAF-----AHDVIAPKIGDLYERHEFPYEIVREMGRMGLFGLPFP 56

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    + W PK+ +
Sbjct: 57  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKRQWLPKLCA 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D     +      +   + ++G K F+++  
Sbjct: 117 GE-------------ALGAFGLTEPDGGSDAGGTRTTAVLDKATNEWVINGSKCFITNSG 163

Query: 240 SDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G  L+  ++      G       +K+G  ++ T EL F++  
Sbjct: 164 TDITELVTVTAVTGRKEDGRPLISAIIVPSGTPGFTVAAPYSKVGWSASDTRELSFTDVR 223

Query: 296 GFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
                 L     G  + ++I   LD   +++S +   LA     E++ YA  RH  G  +
Sbjct: 224 VPAANLLGEQGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAAERHAFGRPI 280

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+ +    A       A+     +   +EAA       I K +   +A 
Sbjct: 281 GANQAIQFKIADMEMRAHMARIGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAV 333

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 334 DNARDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|282878200|ref|ZP_06286996.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           buccalis ATCC 35310]
 gi|281299618|gb|EFA91991.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           buccalis ATCC 35310]
          Length = 574

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/425 (18%), Positives = 160/425 (37%), Gaps = 43/425 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL      R +  +          + +   A     ++ S        +    +    
Sbjct: 100 QAGLWGVSMPRCYGGLNLPNVTFSMMSEMIAAADAGFQNIWSLQSC-IDTLYEFGSDEQR 158

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSG 230
           +++ P++                   + + LTE   G+D+  +  +      +  + L+G
Sbjct: 159 EEYIPRVC--------------KGATMSMDLTEPDAGSDLQRVMLKASYDEKEDCWRLNG 204

Query: 231 HKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++  SD  ++LA+ E G      +   + D    G+  + ++NK+G   + T EL
Sbjct: 205 VKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCEL 264

Query: 290 EFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            + N    L G   +     V  +     L  A  SV   + +  EA+ YA+ R   G  
Sbjct: 265 VYKNAKAELCGSTRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEALAYAKERQQFGQA 324

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA------- 391
           +I+ P +   ++ +   + A  +L ++ A   D          + K  +EE A       
Sbjct: 325 IIEFPAVYDMLSRMKAKLDAGRSLLYQTARYVDLYKALEDIQRDRKLSAEERAEMKKYTR 384

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A    P+ K    + A     +A+   GGSG+I      R +R++   SI  G+    V
Sbjct: 385 LADAFTPLAKGMNSEYANENAYDAISVHGGSGFIMAYKSQRLFRDARIFSIYEGTTQLQV 444

Query: 452 LDVLNLLEKGTNL---FEQLFSTLEQD---LGSSGKKVITILRDSISLCKE--DKGLARF 503
           +  +  +  GT L    E L   +E     L    + +     +++++ KE  ++ +  F
Sbjct: 445 VAAIRYIMNGTYLNIMKEMLDKEVEDAWKPLHDRLEVLAQQYEEAVNMVKEADNQEMQDF 504

Query: 504 LTEKI 508
           L  ++
Sbjct: 505 LARRL 509


>gi|324512342|gb|ADY45116.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 411

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 126/389 (32%), Gaps = 43/389 (11%)

Query: 82  PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           P    +   GE  WD V          +++   GL        +                
Sbjct: 47  PVAAHHDKTGEFPWDIV----------KKAHTLGLMNPQIPAKYGGAELSSLETALVVES 96

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                      +     + + V L       K +                +    +    
Sbjct: 97  LAYGCSAIQLCIMGPSLAVAPVLLAGNEEQKKKYL-------------GMLAAEPLIAAY 143

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFL 257
            +TE   G+D+AAI ++ +K  D         W      +  F +LA+ E          
Sbjct: 144 CVTEPGAGSDVAAIKTKAEKKGDSYVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRA 203

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
               + DG   G+   + +  +G R + T  + F +    ++   NV   P    K+ + 
Sbjct: 204 FTAFVVDGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGFKVAMG 260

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                    A  +V     +L EA  YA  R   G  +     +   +AD+A+++  A  
Sbjct: 261 AFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINLELARL 320

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++R A   D  +  S         A I K +    A    A A++ +GG+G+  E  + 
Sbjct: 321 VTYRAAVDVDNKERSS-------YYASIAKCFAADTANITAANAVQILGGNGFNIEYPVE 373

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  R++    I  G+     + +   L +
Sbjct: 374 KLMRDAKIYQIYEGTSQIQRVVISRHLLQ 402


>gi|294812769|ref|ZP_06771412.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325368|gb|EFG07011.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 427

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 141/379 (37%), Gaps = 38/379 (10%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V  H  W            +    G+        +     + + K +A     +A+    
Sbjct: 68  VPVHDEWYAAGQTPRDFYHKLGELGIFGIEVPEEYGG-AGEHSFKYQAVLTEEVARAGVS 126

Query: 150 HLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              S    +  +  LM   T    K W P   S              +    + +TE   
Sbjct: 127 FGGSGVHVALCLPYLMAYATEDQKKRWLPDFVSG-------------ASMYAIAMTEPGT 173

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLL 262
           G+D+A + +  ++  DG  Y L+G K F++  + +D  I+ A+            +   +
Sbjct: 174 GSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDRRHGISLFV 233

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
            D    G    R  +K+G R++ T EL F++     G LLG+ +     +        L 
Sbjct: 234 VDTGLEGYAVGRKLDKLGLRTSDTAELSFTDVRVSAGDLLGEEHKGFSYLGQNLPQERLA 293

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + +    ++     Y R R V G  +      K  +A    ++ AA A+  R  ++
Sbjct: 294 IAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFELASCKAEVDAAEAVVDRALDA 353

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + EAA         K +C ++A  VI   ++  GG GY+ E  IAR Y ++  
Sbjct: 354 HDAGELTAAEAA-------SAKLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRV 406

Query: 440 NSILLGSGNAMVLDVLNLL 458
           N I  G+   M   +   +
Sbjct: 407 NRIYGGTSEVMKSIIAKSM 425


>gi|269128824|ref|YP_003302194.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313782|gb|ACZ00157.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 386

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 125/375 (33%), Gaps = 28/375 (7%)

Query: 97  VEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +E   A+   L+ +    G+        +                     +     M   
Sbjct: 32  LEHANAYPEDLIEQMKRLGIFGLAIPEPYGETKVSTPCFALVTEELARGWMSLAGAMGGH 91

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
              + ++    T    + + P++ + E             +   + LTE  GG+D+ A+ 
Sbjct: 92  TVVSKLICDFGTEEQKRRYLPRMATGE-------------LRAAMALTEPGGGSDLQAMR 138

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQ 273
           +      D         W  ++  +    +L + +   R     +  LL +  P GL   
Sbjct: 139 TTATLDEDHYVINGAKTWITNARRAGLIALLCKTDPEARPAHKGISILLVEKVP-GLTVS 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           R   K+G +   + EL F +        L G        +     +  +  A  +    R
Sbjct: 198 RDLPKLGYKGVESCELAFEDCRVPRTALLGGREGRGFAQMMKGLEIGRIQVAARATGVGR 257

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YAR+R   G  +     +   +AD+A  + AA  L    A  +D  +    E
Sbjct: 258 AAFDDAFRYARQRESFGKPIWQHQSIGNYLADMATKLTAARRLLLHAAERYDSGERCDME 317

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G+   
Sbjct: 318 AGMA-------KLFASETAMEIALNAIRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEI 370

Query: 450 MVLDVLNLLEKGTNL 464
               ++  L     L
Sbjct: 371 QRNVIIKQLISRGGL 385


>gi|327448686|gb|EGE95340.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA1]
          Length = 382

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVKKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|146340423|ref|YP_001205471.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146193229|emb|CAL77244.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 569

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/523 (19%), Positives = 195/523 (37%), Gaps = 46/523 (8%)

Query: 43  LVALIANFPSVVHKELELLGEYV---LSCTAQELARMANYNTPQLHAYGPGGERWDKVEF 99
           L  L A F     + +  + E      +   + L   +N   P+L            V  
Sbjct: 27  LRDLSAGFAEAGDETIAAILESASAFAADRLEALNAQSNSAAPRLVD--------GAVVT 78

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
                 + R     G                    +    ++       G L  P  ++ 
Sbjct: 79  SDLHGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVFDRHCAAFGMLPVPVRSAV 138

Query: 160 SMVALMTTPR-VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            ++   TT   +  +W PK+ + E+  T             + ++E   G+D++ I ++ 
Sbjct: 139 RLIEAWTTDDMIRSEWLPKLIAGEWGAT-------------ICISEVGAGSDVSRIRTKA 185

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLEDGSPNGLC 271
               DG + ++G K ++S    D        +LA+ EG  G   FLVP  + DG+ NG+ 
Sbjct: 186 VPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRI-DGAANGVV 244

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            ++L++K+G   + T  + F +  G LLG+       +  M   + +    M +     +
Sbjct: 245 VRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGIASAA 304

Query: 332 LAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-- 384
              A+ YAR+R   G       +I    ++R +  +  D+  A AL +  A   D A+  
Sbjct: 305 ADVALAYARQRLQGGAGPQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADLARVE 364

Query: 385 ----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               +R + AA A+ + PI K    ++A A    A++ +GG+GY  +  + +  R+S   
Sbjct: 365 TNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQVLGGAGYTTDWPVEQLLRDSRVL 424

Query: 441 SILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            I  G+     LD+L   L + G        S    D+    ++ +    + I L +   
Sbjct: 425 PIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLLETTA 484

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           G    + +      + A  +     D A  +   R     + T
Sbjct: 485 GQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDT 527


>gi|323137353|ref|ZP_08072431.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322397340|gb|EFX99863.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 576

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 92/528 (17%), Positives = 186/528 (35%), Gaps = 58/528 (10%)

Query: 40  DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--- 96
           D +L AL         +   L  +       Q L+  A +    LH     G++      
Sbjct: 8   DDILFALRIAAGDGALEADGLYADLADGVAEQTLSEAAKFAEGSLHPLDRIGDKVGARFA 67

Query: 97  ---VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
              V     W          G +    D     +            ++  A +       
Sbjct: 68  DGVVTTASGWREAYALWREGGWNAIAADPDHGGLGLPALLNACCTEIWNGANMAFALCPL 127

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   +    +  + + +  +I S E+                + LTE + G+D+A 
Sbjct: 128 LGHGAIDAMEAHASEALKEIYLARIVSGEW-------------TATMNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL 262
           + ++ ++  DG Y L G K F++    D       ++LA++         +  FL P+ L
Sbjct: 175 LRTRAERAGDGTYRLFGQKIFITYGEHDLADNIVHLVLARLPDAPPGTKGISLFLAPKFL 234

Query: 263 EDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            D +      N L    +++K+G   + T  + + +      +L+G+ N     +  M  
Sbjct: 235 PDENGAFTRRNDLRCGGVEHKLGIHGSPTCTMIYGDNGGAVAYLVGEENKGLACMFTMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIA 367
              L   +  V+    S   A+ +AR R             +++ P + R +  +A   A
Sbjct: 295 NARLAVGLQGVALAERSTQHALAWARERKQGRAPGAVQTSAIVEHPDVARMLMTMAGMTA 354

Query: 368 AATALSFRLANSFDEAKSR------SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A+ A+ +  A + D A+        +E    A ++ P+ K +   +A    +  ++  GG
Sbjct: 355 ASRAICYETAAAIDRARREKNPVRAAEAEERASLLTPVAKAFSTDIANEATSLGVQVFGG 414

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLEQDLGS 478
            GY+EE   A+  R++    I  G+     +D++     L +G  L  ++        G 
Sbjct: 415 MGYVEETGAAQLMRDARICGIYEGTNGIQAIDLVTRKLPLSQGAALAREIGDMRAIASGG 474

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
               V   + ++++   +    A  +    ALA +   L    +   A
Sbjct: 475 EYAAVGEAV-EALAQASDFITRADPVA---ALAGATPYLRLFALARGA 518


>gi|120555756|ref|YP_960107.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325605|gb|ABM19920.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 600

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 83/494 (16%), Positives = 172/494 (34%), Gaps = 61/494 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE  P            G     +D     +   ++        +  A          +
Sbjct: 71  QVEMLPDVKQAFDAYAEAGFLAGRYDYDLGGMQLPESVMAACNGFFTAANPGTAGYPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++ +         +   + S  Y  T             + LTE   G+ +A I 
Sbjct: 131 TAAANLIRVFGNDEQKTKFLSNMLSGRYSGT-------------MALTEPHAGSSLADIR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           +     +DG Y + G K ++S            ++LA+++G       +  F+VP+   D
Sbjct: 178 TSATPTADGHYLIKGAKIYISGGEQSITENIVHMVLAKIKGAPAGVKGISLFIVPKFHVD 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                G  NG+    L +K+G R   +  L F +     G+L+G+ +     +  M    
Sbjct: 238 ENGNPGDRNGVSLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVGEPHQGLKYMFQMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +     +          ++ YA+ R                 +ID   ++R +      
Sbjct: 298 RIGVGFGAAVIGYRGYMHSLEYAKDRLQGRKASEKNPESPQVPIIDHADVRRMLLAQKAY 357

Query: 366 IAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                AL    A   D+  +  +E           ++ P+ K W  +  P     A++  
Sbjct: 358 SEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAWPSEYGPKANDLAIQVY 417

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG+GY  E  + + +R++  N I  G+     LD+L   + +  ++  + L   ++ DL 
Sbjct: 418 GGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKIWQDQSHGLQLLMQEMQVDLQ 477

Query: 478 SSGKK-----VITILRDSISLCKEDKGLARFLTEKIA---LASSAAALYRAGMNDIADVF 529
           ++  +      +++        K  + L + L        LA+++  L+  G   +A ++
Sbjct: 478 AATTERCQQWALSLSETLQQAVKVTQSLGKSLMGGEVDKTLANASCYLHLFGHIIVAWMW 537

Query: 530 LENRFLDNCHSTHC 543
           L  R  +       
Sbjct: 538 L--RQANAAAHALG 549


>gi|126663341|ref|ZP_01734339.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126624999|gb|EAZ95689.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 389

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 142/364 (39%), Gaps = 28/364 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVA 163
           + ++    G     +  ++  +     + +         +    A  + + +  + + + 
Sbjct: 42  IWKKFGEMGFFGINYPEAYGGMNLDLFYTVVFLEELQKVKSSGFAAAMWAHAYLAMTHLN 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                R+ +D+              AP         L +TE  GG+D+A + +   K  D
Sbjct: 102 AEGDERIKQDYL-------------APSIAGEKIGALCITEPFGGSDVAGMRTTAVKKGD 148

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++ + +D +++ A+    +G   V   L D   +G+   +L +K+G R
Sbjct: 149 -SYVINGSKTFITNGVYADYYVVAAKTTPELGNKGVSIFLVDAKTSGISATKL-DKLGWR 206

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+ F N       L+G+       +     L  L  AI + +    ++   I Y 
Sbjct: 207 ASDTAEIAFDNVEIPLENLMGEEGKGFPYIMQHFALERLIMAINAHARAEYAIDYTIEYM 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +     ++  + + A ++      ++      ++ +   +EA  A      
Sbjct: 267 SQREAFGTTINKFQALRHTMVEHATEVEHCKVFNYAAVARLNKGEYVVKEATMA------ 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    K+A   I   ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++ 
Sbjct: 321 -KLKSTKVADEAIYSCLQMLGGYGYMEEYPLARLLRDSRLGPIGGGTSEILKEILSKMII 379

Query: 460 KGTN 463
              N
Sbjct: 380 DNQN 383


>gi|291004058|ref|ZP_06562031.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 389

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 130/366 (35%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL+ +    G+       S+          +          +     M      A ++  
Sbjct: 43  ALIEQMKQLGIFGLAVPESYGGTPVSTPCYVLVTEELARGWMSLAGAMGGHTVVAKLLLR 102

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + + E             V   + LTE  GG+D+ A+ +   + +DG
Sbjct: 103 FGTEEQKRRYLPGMATGE-------------VRATMALTEPGGGSDLQAMRTVASRDADG 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  +S  S    ++ + + R       +  LL +  P GL   R   K+G +
Sbjct: 150 YVVNGSKTWITNSRRSQLIALMCKTDPRAEPAHKGISILLVEHGP-GLTVSRDLPKLGYK 208

Query: 283 SNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F +        L G        +        L  A  ++   R +L +++ Y
Sbjct: 209 GVESCELSFDDYRASADAVLGGVEGAGFAQMMKGLETGRLQVAARALGVARAALEDSLAY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A   +AA  L+   A  +D  +    EA  A     
Sbjct: 269 AQERESFGKPIWQHQSIGNYLADMATSFSAARQLTLHAAREYDAGRRVDMEAGMA----- 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +  +A+   GG GY  E  + R++R++P   +  G+       + + L
Sbjct: 324 --KLFASETAMRIALDAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIASQL 381

Query: 459 EKGTNL 464
            K   L
Sbjct: 382 VKRGGL 387


>gi|325676123|ref|ZP_08155804.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553033|gb|EGD22714.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 385

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 136/376 (36%), Gaps = 31/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
             W++    P      RR    G+        +                    A +  G 
Sbjct: 30  HEWEEQGHPP--RDFYRRLGELGVLGIQVPEEYGGGGEASFKFNAVVGEETAAAGVSFGT 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +         + W P   S +                 + +TE   G+D
Sbjct: 88  YSVHASLILPYLLSYANEEQKQRWLPGFASGDIM-------------TAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDG 265
           +A I +     +DG  Y L+G K F++   ++D  +++ +            +  L  D 
Sbjct: 135 LANIGTTAVLSADGSHYVLNGAKTFITGGALADLVLVVCRTSPSTPEDRRAGLTILAVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    R  +KIG +++ T EL F++    +   LG+   +   +        L  A+
Sbjct: 195 TSEGFAVGRKLHKIGLKASDTAELSFTDVEVPVGDRLGEEGAAFTYLTHNLAQERLSIAL 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +  R +L  AI Y + RHV G  +      K  +A+ A D+ A T ++ R     D 
Sbjct: 255 GGAATARAALQHAIAYVKDRHVFGKPVASFQNTKFVLAECATDVEAITLMADRALELHDA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++  + I
Sbjct: 315 DELSVADAAKA-------KLFCTETAGKVIDKCLQLHGGYGYITEYPIARLYADTRVSRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   +
Sbjct: 368 YGGTSEVMKTIVAKSI 383


>gi|37912880|gb|AAR05216.1| predicted acyl-CoA dehydrogenases [uncultured marine
           proteobacterium ANT32C12]
          Length = 383

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 145/379 (38%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--L 142
               P  + W+K    PA H L ++  + GL     +  F  +    +++   +     +
Sbjct: 20  KEINPYTDEWEKEGIFPA-HELFKKMGNLGLLGISREERFGGMGLDYSYETVFSEELGLI 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            +   A  +   +  +   ++L  +  + +D+               P     +   + +
Sbjct: 79  SSGGVAMAIGVQTNMATPSLSLHGSDELRRDFL-------------MPAISGDMVCSIAV 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D++AI +  +K  D         W  +S  +D   +LA             ++
Sbjct: 126 SEPSAGSDVSAIKTTAKKDGDDYVINGTKMWITNSTQADFICLLANTGEGNPHSNKSLII 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
              +  G+      NK+G RS+ T ++ F +      +L+G+         +      + 
Sbjct: 186 VPMNLPGISLSERFNKLGMRSSDTAQIFFDDVRVPQRYLIGEEGKGFRYQMEQFQEERIY 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +   + + I Y  +R   G  ++D  V+   +A++  ++ A  +L +     
Sbjct: 246 GAAGALKMLGQVIQDTIEYTSQRQAFGKSILDNQVVHFRLAELQTEVEALRSLVYDAVEG 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +   +  + +A+ A++ A        ++   V    ++  GG GY+ +  ++R +R+   
Sbjct: 306 YINGQDVTMKASMAKLKAG-------RLGREVTDSCLQYWGGMGYMWDTPVSRAFRDGRL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
            SI  G+   M+  +   +
Sbjct: 359 TSIGGGADEIMLGIICKHM 377


>gi|183220651|ref|YP_001838647.1| acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910753|ref|YP_001962308.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775429|gb|ABZ93730.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779073|gb|ABZ97371.1| Acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 585

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 84/493 (17%), Positives = 169/493 (34%), Gaps = 73/493 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE  G+   +  +Q   +M       L           +V F  +   +  +    GL  
Sbjct: 66  LEAGGDIAGNDISQIAKQMDEEG---LKYKD------GQVGFPKSMLDVTEKIKSAGLLP 116

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +      +   +            +    +  A  V    T  +  ++ PK
Sbjct: 117 YGIHRHYGGLGLPSVVQSMLSECVSRGDGSL-AITLGCMNLAETVERFGTEEMIHEFVPK 175

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + + E                 + LTE   G+D+  + ++  K  DG++ ++G K F++ 
Sbjct: 176 MAAGELCG-------------AMALTEPNYGSDLPNLQTKAVKGEDGVWRITGTKRFITH 222

Query: 238 PMS-----DAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
                      + LA+      G   +   L       +    ++ K+G   + T E+ F
Sbjct: 223 ACGFGDAPSIILTLARTGSTTSGARGLSFFLV--HSKDVFVASIEKKMGLHCSPTCEVVF 280

Query: 292 SNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            N  G L+G+           M     L+ A  ++     +  E   YA  R   G  + 
Sbjct: 281 ENAPGILIGEEGKGLVKYSMAMMNQARLNIAAQAMGIATAAYFEGKKYAEERVQFGKTIS 340

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------------------ 392
           +   +K+ +  +  ++AA   + +  + + D+ + + E                      
Sbjct: 341 NITAVKKMLERMEREVAAMRCILYEASFAVDQYRWKEERGKMKGLTEKDIKKDETFKKWE 400

Query: 393 --ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A +  P++KY+  +MA  V  +A++  GGSGY E+  +AR YR+    +I  G+    
Sbjct: 401 KLASLFTPLSKYYITEMANVVAYDALQIHGGSGYTEDYDVARLYRDVRITNIYEGTTQLQ 460

Query: 451 VLDVLNLLEKGT--------------------NLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +  +  +  G                     +    LF   E  +    +   T LR+ 
Sbjct: 461 TVACIGGIVSGMTETGIYREYLKSEMAGFVSSSELNDLFKQFETVVAEFAEIDSTPLREE 520

Query: 491 ISLCKEDKGLARF 503
           ++  +  +  ARF
Sbjct: 521 LAF-EVVESAARF 532


>gi|307330312|ref|ZP_07609458.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306884008|gb|EFN15048.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 400

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 128/386 (33%), Gaps = 35/386 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +  A++      G+   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTAIVEGLKELGVFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + PK+   E                   ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTEEQKEYFLPKMALGEIRG-------------AFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP--- 267
           TS+  +  D         W  +   S    +L +     EG      +   L +  P   
Sbjct: 142 TSKAVRDGDEYVLNGQKMWLTNGATSTLVAVLCRTGDAQEGVAPHKAMTTFLIEKEPGFG 201

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL      +K+G +   T EL            L G  N     + D   +  ++ 
Sbjct: 202 EVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPADRVLGGMPNRGFYQMMDGVEVGRVNV 261

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A       R +    + YA++RH  G  +     ++  +A++   + A+ A+    A   
Sbjct: 262 AARGCGVARRAFELGVAYAQQRHTFGKPIAQHQAIQFKLAEMGTKVEASHAMMVNAARKK 321

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P  
Sbjct: 322 DSGARNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPML 374

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE 466
            I  G+     + +   L +     +
Sbjct: 375 LIGEGTAEIQKMIIGRRLLEEYRAQD 400


>gi|194015538|ref|ZP_03054154.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194012942|gb|EDW22508.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 593

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 167/498 (33%), Gaps = 47/498 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER---------WDKVEFHPAWH 104
             +E++  G +++  T  E        + +    G   E           D++E H   H
Sbjct: 3   AMEEVKKGGSFLIDETNYEHIFTPEDFSDEHQMIGKTTEDYILQDVVPYIDQIENHEFEH 62

Query: 105 --ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              LL+++   GL  +     F  +   +         +  A   +    +     +  +
Sbjct: 63  SVRLLKKAGELGLLGADVPEEFGGLGLDKISSAIITEKFSRAGSFSLSYGAHVGIGSLPI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L       + + P + S E                   LTE   G+D     +      
Sbjct: 123 VLFGNQAQKETYLPGLASGE-------------TIAAYALTEPGSGSDALGAKTTAVLNE 169

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G  Y L+G K W  +S  +D F++ A+++G          + +    G+     + K+G
Sbjct: 170 AGTHYVLNGEKQWITNSAFADVFVVYAKIDGEH----FSAFIVEKDFPGVKTGPEEKKMG 225

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            + ++T  L   +        L     G V    IL       A+ +V   +  +  +  
Sbjct: 226 IKGSSTRTLILEDAQVPKENLLGEAGRGHVIAFNILNIGRYKLAVGTVGASKRVIQLSAE 285

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------------EAKS 385
           YA +R      +    ++   +A+++  + A  +  +R    F+            + K 
Sbjct: 286 YANQRKQFQTPISRFSLIGEKVANMSAKLYAMESAVYRTVGLFEQRMGLLSEEEQKDGKQ 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++  A   I   + K    +    +  E ++  GG G+++E  + R YR+S  N I  G
Sbjct: 346 IAQSIAEYAIECSLCKVLGSETLDYIADEGVQIHGGYGFMQEYEVERAYRDSRINRIFEG 405

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     L V     K     E       Q L      ++        L +E   LA    
Sbjct: 406 TNEINRLLVPGTFLKKAMKGELPLLQKAQTLQEELMMMMPEEPGDQPLDQEKYLLA--HA 463

Query: 506 EKIALASSAAALYRAGMN 523
           +KIAL  S  A  + G  
Sbjct: 464 KKIALMVSGMAAMKYGKA 481


>gi|322701299|gb|EFY93049.1| isovaleryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa
           102]
          Length = 401

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 145/391 (37%), Gaps = 38/391 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           F +   ++L+ L E V   T +E+      +T             DK    P  + +  +
Sbjct: 45  FEAPTSEDLDELRERVQEFTRREITEEVAAHT-------------DKSNAFP--NEMWPK 89

Query: 110 SIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
               G      D     +    QAH +    +   +        + S    + + L  +P
Sbjct: 90  LGEAGFLGITADEDVGGLGMGYQAHAVVMEEISRASGSIGLSYAAHSQLCVNQLQLNGSP 149

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K + P + +              +    L ++E   G+D+ ++ +  +K+  G    
Sbjct: 150 EQKKKYLPGLIAG-------------TKIGALAMSESGSGSDVVSMRTSAKKVDGGHLLN 196

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  + P +D  ++ A+ E   G   +   L +   +G    R  +K+G R + T E
Sbjct: 197 GSKMWITNGPDADLIVVYAKTEPDKGSKGITAFLVETKTDGFSCARKLDKMGMRGSNTGE 256

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F N F     ++G +N     + +   L  L  +   +  M+ +L  A+ ++ +R   
Sbjct: 257 LMFDNVFVPEENVVGSVNGGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQF 316

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +AD+   + AA A ++  A   D      E+             +  
Sbjct: 317 GSPIAHNQLVQGKLADMYTKLQAARAYTYATAKQVD------EQGVIRTQDCAGAILYAA 370

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + A     + ++ +GG GY+EE   +R  RE
Sbjct: 371 ERATECALDCIQLLGGMGYVEEMPASRLLRE 401


>gi|333028414|ref|ZP_08456478.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332748266|gb|EGJ78707.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/414 (20%), Positives = 142/414 (34%), Gaps = 37/414 (8%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P+ + + +E       S     L R             P     ++    P   A LR  
Sbjct: 2   PADIRRSVERDLSTEESRELIALVRDIAR-----KEIAPHAAAEEESGTFP--RAALRLL 54

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL    +   +    +  +  ++A      A+L  G  +S  V S   +AL  T   
Sbjct: 55  SDAGLLGLPYAAEYGGGEQPYSVYLQALEELASARLTVGIGVSVHVLSCHALALHGTKEQ 114

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              W                M    +     L+E   G+D AA++ +  +          
Sbjct: 115 RAAWL-------------PGMLGGGLLGSYCLSEPTAGSDAAALSMKAVRDGGDWVLSGT 161

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W     +SD   +LA+  G  G   V   L      GL     + K+G + + T +L 
Sbjct: 162 KAWITHGGVSDFCTVLAR-SGGPGAKGVTAYLVPADAPGLSAAPPERKMGLKGSPTAQLH 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHV 344
           F        GD        E     L  LD+  + ++   V LA+A   A       R  
Sbjct: 221 FDGVRV---GDERRIGAEGEGFSLALDALDAGRLGIAACAVGLAQAALDAALDWAAERRQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  + D   ++  +AD+A  + A  AL    A   D     + +AA A+++       C
Sbjct: 278 FGRAIGDFQGLRFLLADMATAVEAGRALYLAAARRKDAGLPYARQAAMAKLL-------C 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              A  V  +A++  GG GY  +  + R+ RE+    I+ G+     + +   L
Sbjct: 331 TDNAMKVTTDAVQVFGGYGYTSDFPVERYLREAKVLQIVEGTNQVQRMVIGRHL 384


>gi|289645155|ref|ZP_06477173.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505032|gb|EFD26112.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 382

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 143/402 (35%), Gaps = 29/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + S  A+EL  +A+          P    W++    P            GL    +  
Sbjct: 5   RLLPSDEARELVELASTIAE--KELEPRVVEWEEAGRFP--RDAFTVLGQAGLLSLPYPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                 +     ++               +S    S   +A+  +P   +   P++    
Sbjct: 61  EVGGGGQPFEVYLQVLEEIAYRWAAVAVGISVHALSCYPLAIAGSPAQRETLLPRLLGG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241
                        +     L+E   G+D +A+ ++    +DG + L+G K W      +D
Sbjct: 120 ------------DLLGAYCLSETHAGSDPSAMRTRATATTDGGFLLAGTKAWVTHGGAAD 167

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            + + A+         +   + D + +GL  Q  + K+G R + T  + FS+       L
Sbjct: 168 FYTVFARTSDDRSS-GISCFVADATSDGLTTQPPERKMGLRGSPTAIVNFSDVRLPADRL 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G                 L  A  +V   + +L +A+ YAR+R   G  +I+   +   
Sbjct: 227 VGQPGQGLSIALSALDSGRLGIAATAVGLAQRALDDAVAYARQRTSFGKPIIEHQGLGFL 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  + +A A +   A   D     S +       A I K      A  V  +A++ 
Sbjct: 287 LADMAAAVESARATTLAAARRRDAGLPFSRQ-------ASIAKLVATDAAMKVTEDAVQV 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG+GY  +  + R+ RE+    I  G+     L +   L +
Sbjct: 340 FGGAGYTHDYPVERYMREAKVMQIFEGTNQIQRLVISRHLAR 381


>gi|254818283|ref|ZP_05223284.1| FadE3_2 [Mycobacterium intracellulare ATCC 13950]
          Length = 381

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 134/367 (36%), Gaps = 31/367 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++       +          +R         +     M      
Sbjct: 33  YPEAWIEQMKR---IGIYGLAVPEEYGGSPVSMPCYVRVTEELARGWMSLAGAMGGHTVV 89

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P +   E             V   + LTE  GG+D+  + +  
Sbjct: 90  AKLLTLFGTEEQKRTYLPPMAGGE-------------VRATMALTEPGGGSDLQNMATTA 136

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRL 275
                G   ++G K ++S+      I +L + +   +     +  +L +  P GL   R 
Sbjct: 137 LSDDAGGLVINGSKTWISNARRSGLIALLCKTDPNTKPRHTGISIVLVEHGP-GLTVSRD 195

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 196 LPKLGYKGVESCELSFDNYRVPETAILGGVAGEGFSQMMKGLETGRIQVAARALGVATAA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA 
Sbjct: 256 LEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEAG 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 316 MA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 368

Query: 452 LDVLNLL 458
             +   L
Sbjct: 369 NVIARQL 375


>gi|220925085|ref|YP_002500387.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949692|gb|ACL60084.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 597

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/549 (18%), Positives = 188/549 (34%), Gaps = 66/549 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLH-AYGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            V+     E A++       L+      G        V     + A        G     
Sbjct: 36  DVVEAILTEGAKLCEEVLAPLNLPGDAEGCTRHPDGSVTTPKGFKAAYAAYAGGGWTGLS 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPK 177
               +          I +A    ++       M P +T  +M AL    +    + + PK
Sbjct: 96  MPAEYGGQGLPA--TINSAIQEFVSSANVAFGMYPGLTQGAMAALLVHGSAEQKRTFLPK 153

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   GTD+  + ++     DG Y ++G K F+S+
Sbjct: 154 MTEGVWTGT-------------MNLTEPHCGTDLGLLKTRAVPNPDGSYSITGTKIFISA 200

Query: 238 PMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGN 281
              D       ++LA++EG       +  F+VP+LL          NG+    ++ K+G 
Sbjct: 201 GEHDLSENIIHLVLARIEGAPAGTKGISLFVVPKLLVKADGSLAERNGVSCGSIEQKMGI 260

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            +NAT  + +    G+LLG+ N     +  M     L   I  +     +   A+ YA+ 
Sbjct: 261 HANATCVMNYDGARGWLLGEANRGLNAMFVMMNEARLAVGIQGLGLSEAAYQNAVAYAKD 320

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           R                  +I  P ++R +  I     AA AL    A   D A   ++ 
Sbjct: 321 RLQGRALTGAQAPDQPADPIIVHPDVRRTLLSIRAFNEAARALVMWTALQADVAHRATDP 380

Query: 390 AAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A          +M P+ K        A   EA +  GG GYIEE  +++  R++    I 
Sbjct: 381 AERQAAEDHLGLMTPVVKGVLTDRGFANAVEAQQVFGGHGYIEESGMSQFVRDARIAQIY 440

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK--VITILRDSISLCKEDKG 499
            G+     +D++   L   G     +    +E     +G    +   +        + + 
Sbjct: 441 EGANGIQAMDLVGRKLPRDGGRAMMRFLQEVETFCRENGADETLKGYVGPLAQALGDLQK 500

Query: 500 LARFLTEKIAL----ASSAAALYRAGMNDIADVFL---ENRFLDNCHSTHCMLHGRFNAA 552
              +L +        A +AA  Y   M  +A  ++     +      +    +  R +A 
Sbjct: 501 ATMWLMQNAMAKPDNAGAAATDYMHLMGLVALGYMWARIAKAAAARKAEGTSIGARMDAK 560

Query: 553 HIIDSLYLD 561
            +    Y++
Sbjct: 561 LMTGRFYME 569


>gi|302537838|ref|ZP_07290180.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446733|gb|EFL18549.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 401

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 36/386 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKEYFLPRMALGE-------------VRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVKDGDEYVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGQTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  + +   ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLF 465
             I  G+     + +   L +   L 
Sbjct: 375 LLIGEGTAEIQKMIIGRRLLEEYRLQ 400


>gi|195377100|ref|XP_002047330.1| GJ13373 [Drosophila virilis]
 gi|194154488|gb|EDW69672.1| GJ13373 [Drosophila virilis]
          Length = 581

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/466 (18%), Positives = 168/466 (36%), Gaps = 53/466 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             G         +  +        R  ++     L     L +        + L  TP  
Sbjct: 65  ELGGMGIQVPSEYGGLGMNNTQYARLCQIVGANDLGLGITLGAHQSIGFKGILLYGTPEQ 124

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLS 229
              + PK+ S E             V     LTE   G+D  +I S+  K +D   Y L+
Sbjct: 125 KAKYLPKVASEE-------------VYAAFALTEPSSGSDANSIRSRAVKSADNKYYILN 171

Query: 230 GHKWFLSSPM-SDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G K ++S+   ++   + AQ E      G      V   + + S  G+     + K+G +
Sbjct: 172 GSKIWISNGGLAEVMTVFAQTEQIDKKTGEKKDK-VTAFIVERSFGGVTSGPPEKKMGIK 230

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336
           ++ T E+ F +    +    NV     E  K+ +  L+S    +       M+  +  A 
Sbjct: 231 ASNTTEVYFEDVKIPI---ENVLGKEGEGFKVAVNILNSGRFGMGATMSGTMKKCIEIAT 287

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +A  R   G  + +   ++  +A + +   A  +++F ++ + D             + 
Sbjct: 288 AHANSRVQFGQKIKEFGTIQEKLAKMNILQYATESMAFMISQNMDSGSQD------YHLE 341

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-L 455
             I+K +  + A  V  EA++ +GG G+++E  + R  R+     I  G+   + L V L
Sbjct: 342 TAISKIYSSESAWHVCDEAIQILGGMGFMKETGLERIMRDLRIFRIFEGTNEVLRLFVAL 401

Query: 456 NLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDSISL---------CKEDKGLARF 503
           + ++   N  ++L   L     +LG   K+       +I L           E +  A+ 
Sbjct: 402 SGVQYAGNHLKELQRALKNPAANLGFIFKEASRRATTTIGLGGTDLSTFVVPELQESAKR 461

Query: 504 LTEKIALAS--SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               I L    +   L +   N I +  + N   +     + M+  
Sbjct: 462 TAACIDLFGRTTEEVLVKYNKNIINEQIILNHLANAAIDIYAMIAT 507


>gi|134101122|ref|YP_001106783.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913745|emb|CAM03858.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 388

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 133/376 (35%), Gaps = 28/376 (7%)

Query: 96  KVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   L+ +    G+       S+          +          +     M  
Sbjct: 32  ELEHSGTYPEALIEQMKQLGIFGLAVPESYGGTPVSTPCYVLVTEELARGWMSLAGAMGG 91

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A ++    T    + + P + + E             V   + LTE  GG+D+ A+
Sbjct: 92  HTVVAKLLLRFGTEEQKRRYLPGMATGE-------------VRATMALTEPGGGSDLQAM 138

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCY 272
            +   + +DG        W  +S  S    ++ + + R       +  LL +  P GL  
Sbjct: 139 RTVASRDADGYVVNGSKTWITNSRRSQLIALMCKTDPRAEPAHKGISILLVEHGP-GLTV 197

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            R   K+G +   + EL F +        L G        +        L  A  ++   
Sbjct: 198 SRDLPKLGYKGVESCELSFDDYRASADAVLGGVEGAGFAQMMKGLETGRLQVAARALGVA 257

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +L +++ YA+ R   G  +     +   +AD+A   +AA  L+   A  +D  +    
Sbjct: 258 RAALEDSLAYAQERESFGKPIWQHQSIGNYLADMATSFSAARQLTLHAAREYDAGRRVDM 317

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K +  + A  +  +A+   GG GY  E  + R++R++P   +  G+  
Sbjct: 318 EAGMA-------KLFASETAMRIALDAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNE 370

Query: 449 AMVLDVLNLLEKGTNL 464
                + + L K   L
Sbjct: 371 IQRNVIASQLVKRGGL 386


>gi|117920993|ref|YP_870185.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613325|gb|ABK48779.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3]
          Length = 596

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/547 (18%), Positives = 198/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D ++      +   I A  +     +
Sbjct: 62  VQGCKLVDGKVVTPEGFADAYQQFVDNGWPTLTCDPAYGGQGLPEVVGIFATEMQTSTNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + S +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYSAIHAHGSEALKQKYLAKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++    +DG + ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPTADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G  N L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  S+       A  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDLGSSGKK------VITILRDSISLCKEDKGLARFLTE--KIALASSAAALYRAGM 522
            + + + S GK       +  ++  +  L K    LA        I  A+S A L   G+
Sbjct: 469 LVTEFIQSQGKDPQMQPYISGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGI 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|86741126|ref|YP_481526.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86567988|gb|ABD11797.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 385

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 126/360 (35%), Gaps = 27/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G+        +  V       ++         +     M      ++++  
Sbjct: 39  KLIEQMKKLGIFGLTIPEPYGEVAVSTPCYVQVTEQLARGWMSLAGAMGGHTVVSTLILT 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T +    + P + S E   T             + LTE  GG+D+ A+T+  ++  + 
Sbjct: 99  FGTEQQKLRYLPALASGEIRAT-------------MALTEPAGGSDLQALTTSARRAGEH 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S    +L + + +       +  LL +   +G    R   K+G +
Sbjct: 146 YVVNGSKTWITNARRSQLIALLCRTDPKAEPRHKGISILLVEPG-DGFTVSRDLPKLGYK 204

Query: 283 SNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F +        L G+       +     +  +  A  ++   R +L +A+ Y
Sbjct: 205 GVESCELSFDDYHVPVDALLGGEEGRGFAQMMKGLEIGRIQVAARALGVARAALDDALRY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A    AA  L    A+ +D       EA  A     
Sbjct: 265 AQEREAFGKPIWKHQSIGNYLADMATKYTAARQLVLLAADRYDAGDRCDLEAGMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +   A+   GG GY  E  + R++R++P   I  G+       +   L
Sbjct: 320 --KLFASETAMEIALNAVRVHGGYGYSTEFDVERYFRDAPLMIIGEGTNEIQRNVIAAQL 377


>gi|332291020|ref|YP_004429629.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169106|gb|AEE18361.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 394

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 138/352 (39%), Gaps = 15/352 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +     D  F  +   +A+       +    L        S   A   A+     +
Sbjct: 38  IERFIWKKFGDMGFFGISYPEAYGGMNLDFFYTVILLEELQRINSGGFA--AAIWAHAYL 95

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                                        L +TE  GG+D+A + +   K  D  Y ++G
Sbjct: 96  AMTHLNVEGDERIKSEYLTASIAGDKIGCLCITEPFGGSDVAGMRTTAVKDGDH-YVING 154

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++ + SD  I+ A+    +G   +   L D    G+   +L +K+G R++ T E+
Sbjct: 155 SKTFITNGVYSDYLIVAAKTAPELGGKGMSIFLLDRDMPGVSATKL-DKLGWRASDTGEI 213

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N       L+G+ N   G +        L   I + +    ++  A+ Y + R   G
Sbjct: 214 AFDNVKVPVANLMGEENAGFGYIMQHFASERLIMGINAHARAEYAIEYALDYMKERMAFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +A+   ++  + A ++ +A   ++ +   +EA  +++ A        K
Sbjct: 274 VTIDKFQALRHKLAERQAEVEMSKAFNYTIAYRLNKGEYVVKEATMSKLTA-------TK 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A  VI + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++
Sbjct: 327 IADEVIYDCLQMLGGYGYMEEYPLARMLRDSRLGPIGGGTSEILREIIAKMV 378


>gi|327314010|ref|YP_004329447.1| acyl-CoA dehydrogenase [Prevotella denticola F0289]
 gi|326944922|gb|AEA20807.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella
           denticola F0289]
          Length = 577

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/474 (17%), Positives = 169/474 (35%), Gaps = 52/474 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            V +    + A   +   P L          +++ +       +  +   GL      R 
Sbjct: 60  DVAANIIAQNAEAVDQEGPHLID--------NRMHYASKTLENIEATRQAGLWGVSMPRR 111

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +  +          + +   A     ++ S        +         + + P+I + E 
Sbjct: 112 YGGLNLPNVVFSMMSEVIAAADAGFQNIWSLQSC-IDTLYEFGNEEQRQKYIPRICAGE- 169

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDA 242
                         + + LTE   G+D+  +  +      +  + L+G K F+++  SD 
Sbjct: 170 -------------TMSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDI 216

Query: 243 FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++LA+ E G      +   + D    G+  + ++NK+G   + T EL + N    L G+
Sbjct: 217 HLVLARSEEGTRDGRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCGN 276

Query: 302 LNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             +     V  +     L  A  SV   + +  E + YA+ R   G  +I  P +   ++
Sbjct: 277 TRMGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLS 336

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA-----------------YARIMAPITKYW 403
            +   + A  +L ++ A   D  K+  + A                   A    P+ K  
Sbjct: 337 RMKAKLDAGRSLLYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGI 396

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A     +A+   GGSG+I E    R YR++   SI  G+    V+  +  +  GT 
Sbjct: 397 NSEYANQTAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTY 456

Query: 464 LF---EQLFSTLEQDLGSSGKKVITIL----RDSISL--CKEDKGLARFLTEKI 508
           L    E L   L  D   + +  +  L     +++      E++ +  FL  ++
Sbjct: 457 LSIMKEMLEDELACDCMKALRDRVARLVRLYEEAVEKVNAGENQDVHDFLARRL 510


>gi|284031326|ref|YP_003381257.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810619|gb|ADB32458.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 443

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/415 (17%), Positives = 143/415 (34%), Gaps = 45/415 (10%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              ++ A    A+   P           WD+ E  P    +++ +   GL+    + +  
Sbjct: 44  REIRDWAHTFAADVMRP-------AASEWDERETTP--WPVIQEAAKIGLYGLEANVNLF 94

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    +    L+       G  ++ +  ++S +    TP     W P+ +    D 
Sbjct: 95  IDPSGLLMPLVHEELF-WGDAGIGMSLTGTGLASSAIFSNGTPEQWSQWLPRCYGTPDD- 152

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAF 243
                            +E   G+D++AI ++                 W  +  ++D  
Sbjct: 153 ---------VKVAAFCSSEPGAGSDVSAIRTRATYDEKTGEWVINGQKAWATNGGIADIH 203

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +++A V+  +G       +   S   GL       K G R++ T ++ F N        L
Sbjct: 204 VVVATVDPSLGTKGQAAFVVPKSEVRGLEQGTKLKKHGLRASHTADVFFDNVRIPAENVL 263

Query: 303 N-------------------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
                                +         +        ++   R +   A+ YA+ R 
Sbjct: 264 GGKEKLDARLAKAREPRDGQRARNASMATFEMTRHIVGAQAIGIARAAYEFALEYAKGRE 323

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +ID   +   +AD+A++I AA  L +R AN    A  R E   Y      + K  
Sbjct: 324 QFGRPIIDNQGIAFKLADMAMEIDAARLLVWRAAN-MSSALMRGESPNYRHGEGSMAKLK 382

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ++A  V  EA++ +GG+GY  E  + R +R++   +I  G+     L +   +
Sbjct: 383 AGEVAVKVTEEAIQILGGNGYTREYPVERMHRDAKIYTIFEGTSEIQRLVISRAI 437


>gi|294677047|ref|YP_003577662.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294475867|gb|ADE85255.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 386

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 143/406 (35%), Gaps = 37/406 (9%)

Query: 61  LGEY--VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           LGE    L    Q  AR             P     D+    P  + L       GL   
Sbjct: 10  LGEDIAALRDMVQAWARD---------RLAPMAAAVDRDNLFP--NELWAEMGALGLLGI 58

Query: 119 IWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                +        AH +    +  ++   +    + S    + + L  T    + + P 
Sbjct: 59  TVPEEYGGAGMGYLAHVVATEEIARVSASISLSYGAHSNLCVNQLKLNGTAEQKRKYLPD 118

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S              +    L ++E   G+D+  +  + ++  D         W  + 
Sbjct: 119 LVSG-------------ARIGALAMSESGAGSDVVGMKLRAERRGDVYVLNGHKYWITNG 165

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +D  ++ A+ +   G   +   + +    G       +K+G R + T +L F +    
Sbjct: 166 CDADTLVVYAKTDPAAGSKGITAFIVERGMKGFSSSAHFDKLGMRGSNTAQLFFDDCEVP 225

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAI---MSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L +    V  +   +  +  +   +    +   L E + YAR R   G  +    +
Sbjct: 226 AENVLGLEGKGVRVLMSGLDYERVVLSGIGTGILMACLDEVLPYARTREQFGQPIGSFQL 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  IAD+ +    A A ++ +A + D  +   ++AA        T  +  + A     +
Sbjct: 286 MQAKIADMYVAANTARAYTYEVAKACDRGEVTRQDAA-------ATVLYASEQAMVQAHQ 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++ +GG+G++ + +++R +R++    I  G+     + +   L +
Sbjct: 339 AVQALGGAGFLNDSTVSRLFRDAKLMEIGAGTSEIRRMLIGRELME 384


>gi|24374306|ref|NP_718349.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
 gi|24348850|gb|AAN55793.1|AE015716_3 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1]
          Length = 596

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/554 (18%), Positives = 197/554 (35%), Gaps = 67/554 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPELVDAILQGMADFSTEVMLPLNSIGD 61

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +     V     +    ++ + +G      D +F      +   I    +     +
Sbjct: 62  VQGCKLVEGNVVTPEGFADAYQQFVDNGWPTLTCDPAFGGQGLPEVVGIFVTEMQTSTNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + S +    +  + + + PK+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYSAIHAHGSEALKQKYLPKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGC 255
            GTD+A + ++    +DG + ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPAADGYFAITGEKIFISSGDHPFTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G  N L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNSDGSLGQANSLYASGLEHKMGIHGNSTCVMVFDGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  S+ A        A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHSDPAKAKAASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWST 468

Query: 471 TLEQDLGSSGKKVI------TILRDSISLCKEDKGLARFLTE--KIALASSAAALYRAGM 522
            + + + S GK          ++  +  L K    LA        I  A+S A L   G+
Sbjct: 469 LVTEFIQSQGKDAQMQPYVSGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGI 528

Query: 523 NDIADVFLENRFLD 536
             +A ++   R  +
Sbjct: 529 TALAWMW--ARMAN 540


>gi|218783000|ref|YP_002434318.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764384|gb|ACL06850.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 124/372 (33%), Gaps = 26/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    P    ++ +    G       +          ++ +    +  +    
Sbjct: 26  PIAKDLDQEARFP--WEVVEKMGALGYFGIQVPKDLGGAGMDSVSYVVAIEEISRVCGGM 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +   +  +   +    T      W P +                       LTE   
Sbjct: 84  GLCVTVHNSVAVHPIMAFGTREQQVKWVPDL-------------AAGKKIGAFCLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + I +   K  D     +   +  +  ++D  ++  +     G   +  ++ +   
Sbjct: 131 GSDASGIQAVALKDGDHYVVNANKVFVTNGGVADTCLIFVRTNPEAGPRGISVIVAERGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G     L++  G R N    +  ++       LLG   +             +  A  +
Sbjct: 191 PGFVVGDLEDLCGMRCNPVSSIRLNDCRIPEDHLLGKEGIGLAIGLAGLDTGRIGIAAQA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L E I Y+++R      +     +   IAD+A  + AA  + +R A   D  K
Sbjct: 251 LGIAQAALEEGIRYSKQRRQFKVPIAKHQSVANMIADMATQVDAARLMVYRAAALKDLKK 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S S+E+A A       K +  + A  V   A++  GG GY ++  + R++R++    I  
Sbjct: 311 SFSKESAMA-------KLFAAETASTVTDMAVQIHGGYGYSKDYPVERYFRDARVTRIYE 363

Query: 445 GSGNAMVLDVLN 456
           G+       +  
Sbjct: 364 GTSEVHRTVIAR 375


>gi|218510490|ref|ZP_03508368.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Brasil 5]
          Length = 266

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 111/268 (41%), Gaps = 10/268 (3%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++  + ++  D         W  ++P +D  ++ A+ +   
Sbjct: 3   GEHVGSLAMSEAGAGSDVVSMRLRAERKGDRYILNGTKFWITNAPHADVLVVYAKTDPAA 62

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G   +  L+ +    G    +  +K+G R + T EL F +        +      V+ + 
Sbjct: 63  GAKGISALIIEKGMPGFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREGEGVKILM 122

Query: 314 ILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             +  + A+++   +  M+  L   + Y R R   G  + D  +M+  IAD+ + + +A 
Sbjct: 123 SGLDYERAVLAAGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSAR 182

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A  + +A + D  ++        R  A     +  + A  V  EA++ +GG+GY ++  +
Sbjct: 183 AYVYSVARACDAGRA-------TRTNAAAAILFASENAVKVSLEAIQALGGAGYTKDWPV 235

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R  R++    I  G+       +   L
Sbjct: 236 ERFLRDAKLYDIGAGTNEIRRYLIGREL 263


>gi|118466488|ref|YP_884079.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167775|gb|ABK68672.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 382

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 135/368 (36%), Gaps = 32/368 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++       +          +R         +     M      
Sbjct: 33  YPEAWIEQMKR---IGIYGLAVPEEYGGSPVSMPCYVRVTEQLARGWMSLAGAMGGHTVV 89

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P++ S E   T             + LTE  GG+D+  +++  
Sbjct: 90  AKLLTLFGTEDQKRAYLPRMASGEIRAT-------------MALTEPGGGSDLQNMSTTA 136

Query: 219 --QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQR 274
                SDG+       W  ++  S    +L + + +       +  LL +    GL   R
Sbjct: 137 LPDPDSDGLVINGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVE-HRPGLTVSR 195

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRV 330
              K+G +   + EL F N        L      G  + MK L    +  A  ++     
Sbjct: 196 DLPKLGYKGVESCELSFDNFRAPATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATA 255

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA
Sbjct: 256 ALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEA 315

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  ++A  +   A+   GG GY +E  + R++R++P   +  G+    
Sbjct: 316 GMA-------KLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQ 368

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 369 RNVIARQL 376


>gi|241767502|ref|ZP_04765184.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241361674|gb|EER58012.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 380

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 124/359 (34%), Gaps = 26/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R++  +GL  ++    +        H              A      S   A  + 
Sbjct: 44  KEVWRKAGREGLLNTMLPEPYG-SGGDFGHAAVLIEEVGRTNATALGFPLHSDIVAPYIY 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                  H  W PK+ + E             +   + +TE   G+D+ ++ +  ++  D
Sbjct: 103 AYGNKEQHDRWLPKMAAGE-------------LIGAIAMTEPGAGSDLKSVRTTAKREGD 149

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++ + S+  I++ +    +G   V  ++ +    G    R   KIG  
Sbjct: 150 H-YLINGAKTFITNGINSEIVIVVCKTAPDLGAKGVSLIVVEDGTPGFSKGRKLEKIGLM 208

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
              T EL F N     G LLG+ N+    +        L  A+ +   +   L + + Y 
Sbjct: 209 GQDTSELFFDNVKVPVGNLLGEENMGFRYLMQELAQERLVVAVRAARCIESFLQKTVDYT 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  + +    +  +A+                    E K   E AA        
Sbjct: 269 RERKAFGQTVFEFQNTRFKLAEAKAQATMLRTFVDECMKLHMERKLTPERAAM------- 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K     +   ++ E ++  GG GY+ E  + R + ++    I  GS   M   +   L
Sbjct: 322 VKLNATALQNRLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRIYGGSDEIMKEIIARTL 380


>gi|307296093|ref|ZP_07575924.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878264|gb|EFN09486.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 576

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 102/554 (18%), Positives = 195/554 (35%), Gaps = 65/554 (11%)

Query: 28  PPLFIGMNAYSSDSL-LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
            P         +  L     +A     V  +L            +E  RM      +LH 
Sbjct: 5   VPPIDDYRFLLTQVLGFDRAMAETGKDVDADLAA-------AVLEEAGRMC---AERLHP 54

Query: 87  YGPGGER-----WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
               G+       D +V     +    R  +  G         +         ++    +
Sbjct: 55  INRHGDEEGSRLIDGEVHTPEGFADAWRDFVAAGWPSLAAAPEYGGQGLPFILQLWLDEM 114

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A +  G     +  +   +A      +   +  ++ S E+                +
Sbjct: 115 LAAANMSFGLFPGLTRGACEAIAAHADDSLKATYLSRMVSGEW-------------TGAM 161

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG---- 251
            LTE   GTD+A + ++    +DG Y ++G K F+SS   D       ++LA++      
Sbjct: 162 ALTESGAGTDLALLKAKAVPDADGGYAVTGQKIFISSGDHDFGGNIIHLVLARLPDAPAG 221

Query: 252 --RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
              +  FLVP+ L D        N +    L+ K+G  +  T  + +    G+L+G+ + 
Sbjct: 222 VKGISLFLVPKYLPDADGNFTVRNAMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEPHR 281

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMK 356
               +  M     L   I  +     +  +A  YA+ R              +I+   ++
Sbjct: 282 GLAAMFTMMNAERLMVGIQGLGIAGAAYQQAAGYAKERLQGRSADGTREPVAIIEHADVR 341

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPA 410
           R + +I   +  A AL    A   D A    + A  A+       + P+ K         
Sbjct: 342 RMLLNIRAFVEGARALGGWTALQLDRAHHHEDAAERAKADGLVALLTPVVKAAFTDYGFE 401

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468
              +A +  GG GYI E  + ++ R++    I  G+     +D++   L   G  + E  
Sbjct: 402 SAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMAGGAVVEGF 461

Query: 469 FSTLEQDLGSSGKKVITI-LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
           F+ +  DLG++G   I +  R++++L +E     R    + A A++A  L    +  ++ 
Sbjct: 462 FALVADDLGAAGASGIAVSTREALALLREVTASLRGAGVEAAGAAAADYLRLFAL--VSM 519

Query: 528 VFLENRFLDNCHST 541
            ++  R       T
Sbjct: 520 GWMWTRMAAAEGDT 533


>gi|146292689|ref|YP_001183113.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564379|gb|ABP75314.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 596

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 94/547 (17%), Positives = 201/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    R+ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYRQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G+PN L    L++K+G   N+T  + F +  G L+G+ +     + 
Sbjct: 229 FAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEDALGELVGEPHQGLPAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++       +  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYRAGM 522
            + + + S      +   +   +    + +  + +L  + A       A+S A L   G+
Sbjct: 469 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLAAQAATNPDIIGAASMAYLELFGV 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|33600112|ref|NP_887672.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567710|emb|CAE31624.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 595

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 162/463 (34%), Gaps = 61/463 (13%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +  +V     +    R     G                         +     
Sbjct: 64  DRAGCRLEGHEVRTPAGFVEAYRAYAEGGWSGLCASPDHGGQGLPTVASAIVGEMLGATN 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +        S  +   +    +  +   +AP++ S E+  T             + LTE 
Sbjct: 124 ISFALYPRLSEGAYRCIRANASAALQAIYAPRLASGEWTGT-------------MCLTES 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
           + GTD+  + ++ +   DG Y +SG K F+SS   D       ++LA++         + 
Sbjct: 171 QAGTDLGLLRTRAEPDGDGAYRISGSKMFISSGEHDLASNIVHMVLARLPDAPAGTRGIS 230

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP+ L D     G  NG+    +++K+G  +NAT  L F N  G+L+G+ N     +
Sbjct: 231 LFVVPKRLPDAQGEPGERNGVYCDAIEHKLGLHANATCVLRFENARGYLVGEPNKGLAAM 290

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRA 358
             M     L +   ++     +L +++ YA  R  S              +I QP ++R 
Sbjct: 291 FVMMNSARLGTGAQALGLTETALQKSLAYAAERLQSRAPGHEKAITRADPIILQPDVRRM 350

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +         A    + LA   D      +   R        ++ P+ K +    A   +
Sbjct: 351 LLTQQAWAQGARMFLYWLALQIDTELHAADPAERDRAGGLLSLLTPVAKAFVSDNAVESV 410

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
             A++  GGSGYI E  I +  R+     I  G+                   + L   +
Sbjct: 411 NLAVQVHGGSGYIVESGIEQTLRDVRILPIYEGTNGVQA-------------HDLLARKV 457

Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
             D G+   +++ + +   +     +G ARF      LA   A
Sbjct: 458 LADQGARLSQLLAMAQAQAAAVSAVEGGARFGQPLRELAGQVA 500


>gi|29828457|ref|NP_823091.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29605560|dbj|BAC69626.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 401

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 129/386 (33%), Gaps = 36/386 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPRMALGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+  K  D         W  +   S+   +L + +     G      +   L +  P  
Sbjct: 142 SSKAVKDGDEYVLNGQKMWLTNGGSSNLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRVPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLF 465
             I  G+     + +   L +   L 
Sbjct: 375 LLIGEGTAEIQKMIIGRRLLEEYRLQ 400


>gi|226349933|ref|YP_002777046.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226245848|dbj|BAH47115.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 138/385 (35%), Gaps = 34/385 (8%)

Query: 89  PGGERWDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH--KIRAARLYLMA 144
           P  ERW+        AW A    +   G+       ++            + A  +    
Sbjct: 27  PHYERWETERLIDRSAWLA----AGKSGIVGLAIPEAYGGSGVTDYRFRNVVAEEIARTG 82

Query: 145 QLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               G  MS     A   +  + T    + W P + + E             +   + +T
Sbjct: 83  TTSFGAGMSLQDDVALPYIIDLGTDDQKQRWLPGMAAGE-------------LIGAIAMT 129

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  I +   +  D  + L+G K F+++ +  D  I++A+ +          L+
Sbjct: 130 EPGTGSDLQGIKTTAVRDGDD-WILTGQKTFITNGIHSDVVIVVARTDPSARARGFSLLV 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R  +K+G     T EL F         LLG        + +   L    
Sbjct: 189 VERDMPGFTRGRKLHKVGLAGQDTAELSFDQVRVPGSNLLGTEGRGFLYLMEHLPLERTS 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ S++G R +     +Y   R   G  + D    + A+A++  +I    +   R   +
Sbjct: 249 IAVTSITGARAAYEWTKNYVFERSAFGAPIGDLQNTRFALAEMLTEIEVTQSHIDRCVLA 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +  + +AA A+        W  ++   V+   ++  GG GY+ E  I R Y ++  
Sbjct: 309 LNAGELTAVDAAKAKW-------WASELQKRVVDRCVQLHGGYGYMLEYPIGRAYVDTRV 361

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464
           ++I  G+   M   +   +    + 
Sbjct: 362 HTIYGGTTEIMKEIIGRDIAADMSA 386


>gi|260828849|ref|XP_002609375.1| hypothetical protein BRAFLDRAFT_98992 [Branchiostoma floridae]
 gi|229294731|gb|EEN65385.1| hypothetical protein BRAFLDRAFT_98992 [Branchiostoma floridae]
          Length = 394

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 68  CTAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              Q+LAR  A     P    Y   GE       +P    +L+++   GL  +       
Sbjct: 16  REYQDLARKFAREEIVPVAPHYDKTGE-------YPV--PVLKKAWELGLMNTHIPAECG 66

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +                        +  +      V +  +    K +  ++       
Sbjct: 67  GMDLGIFDACMITEELAYGCTGIQTAIEANSLGQMPVIIAGSEEQKKKYLGRMT------ 120

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +    G+TE   G+D+A I ++  K  D         W  +   ++ + +
Sbjct: 121 -------EEPLMCAYGVTEPGAGSDVAGIKTKAVKKGDEYILNGQKMWITNGGHANWYFV 173

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+                + D    G+   R +  +G R++ T  + F +        L
Sbjct: 174 LARTSDDPKMPAGKAFTGFIVDREWEGVTPGRKEWNMGQRASDTRGITFEDVRVPAENVL 233

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G    M          A  +    + +L EA  YA  R   G  + +   +   +
Sbjct: 234 GAEGMGFKIAMGAFDKTRPPVAAGATGLAQRALDEATKYALERKTMGKYIAEHQAIGFML 293

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A+ +  +  L+ R A   D+ +  +         A I K +    A     +A++  
Sbjct: 294 AEMAIMVETSRLLTQRSAWEIDQGRRNT-------YYASIAKAYAGDAANKCATDAVQIH 346

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+G+  +  + +  R++    I  G+     L +   L
Sbjct: 347 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIISREL 385


>gi|293604192|ref|ZP_06686600.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292817417|gb|EFF76490.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 608

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/482 (18%), Positives = 172/482 (35%), Gaps = 63/482 (13%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    QE  R        L          W   +V   P +    +     G      
Sbjct: 35  DLVDAILQENGRFVEQAVAPLNVPGDTQPPVWKDGQVTTTPGYAQGFKDYAAGGWQGLQH 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
            + +      +   + AA    +        + P +T   + AL  + +    K++ P +
Sbjct: 95  PQEWGGQGLPK--LVAAAPSENIQAASLAFSLCPMLTDGVIEALLTVGSEAQRKEYVPNL 152

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + ++  T             + LTE + G+D+A + ++  +  DG + L G K F++  
Sbjct: 153 IAGKWTGT-------------MNLTEPQAGSDLAQVATRAVRQDDGTFRLFGQKIFITFG 199

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA+          +  F+VP+ L D     G  N +    L++K+G  
Sbjct: 200 EHDLAENIIHLVLARTPDAPAGVKGISLFIVPKFLVDANGAVGKRNDVWCASLEHKLGIH 259

Query: 283 SNATVELEF--------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            + T  L +            G+ +G+LN     +  M            +     +   
Sbjct: 260 GSPTAVLLYGTGQGEVGEGAVGYQVGELNRGLEYMFIMMNAARYSVGQQGIGVSERAYQH 319

Query: 335 AIHYARRRHVS----GGI----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA--- 383
           A+ YAR R       G      ++  P ++R +  +     AA A+S+  A + D+    
Sbjct: 320 ALAYARERVQGRAVEGSPGPVAIVRHPDVQRMLLTMKALTEAARAVSYVTAAAHDKGTHH 379

Query: 384 ---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              + RS   A+   M PI K +  + A  V +  ++  GG G+IEE   A+ YR++   
Sbjct: 380 PDPEQRSRNRAFYEYMVPIVKGYSTETAVEVASLGIQVHGGMGFIEETGAAQFYRDARIL 439

Query: 441 SILLGSGNAMVLDVLNLLEKGTN-----LFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
            I  G+      D++    +                  + + +   +     RD++ L +
Sbjct: 440 PIYEGTTAIQANDLVGRKTQRDGGATAYAAIAAMRETLRAVEAESTRAAAPERDALRLLR 499

Query: 496 ED 497
           ++
Sbjct: 500 DN 501


>gi|295687743|ref|YP_003591436.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295429646|gb|ADG08818.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 585

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/523 (18%), Positives = 185/523 (35%), Gaps = 55/523 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
            L   FP      +  + E   +  A  LA + N     + A    G     V   P + 
Sbjct: 22  RLADAFPEADADTVAAVLEAAGAFAADVLAPL-NRQGDMVGAKLENGV----VRCAPGFA 76

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              ++    G                +  ++    +   A +  G     S+ +   +  
Sbjct: 77  DAYKQFAEGGWAGLAAAPEHGGQGLPKTLEVAVLEMIQAANMAFGLCPMLSLGAIEALDH 136

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             + R    + PK+ S E+  T             + LTE + G+D+AA+T+      +G
Sbjct: 137 HGSDRQKALYLPKLVSGEWTGT-------------MNLTEPQAGSDLAALTTMATPDGEG 183

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------GSPN 268
            + ++G K +++    D       ++LA+  +   G   V   L            G  N
Sbjct: 184 GWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKGVSLFLAPKVLVGDDGKLGEAN 243

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           GL    L++K+G   + T  + F      L+G L      +  M     L       +  
Sbjct: 244 GLRVGGLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLPNMFTMMNAARLQVGTQGTAIA 303

Query: 329 RVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             +  +A+ +++ R              L D P ++R++  +   I AA  +    A + 
Sbjct: 304 ERAYQQALAFSQERAQGRSAWTGAYPSRLFDHPDVRRSLVLMKAHIEAARGICLSTAVAA 363

Query: 381 DEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D A++ ++E            + PI K W   +   V ++ ++  GG G+IEE   A+HY
Sbjct: 364 DLARAAADETTRTSAKLREELLTPIAKAWSTDVGVWVASQGVQIHGGMGFIEETGAAQHY 423

Query: 435 RESPANSILLGSGNAMVLDVLNLL------EKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
           R++    I  G+     +D++         +   +L + +  T+E    S  K V   L 
Sbjct: 424 RDARIAPIYEGTNGIQAIDLVGRKLSLGEGQAVADLMDDIRDTIEDLKSSDLKAVGLRLE 483

Query: 489 -DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
               +       L     + +  A S A  Y   + D+   ++
Sbjct: 484 AALDAAAGATAWLVERRAKAMPDALSGATAYLKLLGDVVGGWM 526


>gi|111019337|ref|YP_702309.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818867|gb|ABG94151.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 136/357 (38%), Gaps = 14/357 (3%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           + +R I   +        F  +   +A+    A  Y    + A  L   S   +S   + 
Sbjct: 33  IEQRFIDREIWLEAGRNGFLGLEVPEAYGGSEAGDYRFNAVLAEELSRASAAVSSSFGIH 92

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
               V   +  ++ + E             +   +G+TE  GG+D+A++ +   K  D  
Sbjct: 93  A--DVVAPYLVQLTTEEQKQRWLPKFCTGELLTAIGMTEPSGGSDLASLKTTAVKDGDD- 149

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+++   +D  I+ A+         +     +    G    R  +K+G   +
Sbjct: 150 WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLDKVGQHES 209

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       ++G+++     + +M     + +A+ +++     L E I YA+ 
Sbjct: 210 DTAELFFENVRVPSTNIIGEIDRGFIHMMEMLPQERVGAAVSNIAHAAPILEETIQYAKD 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      K  +AD+   +    A       +  + +  + +AA A+       
Sbjct: 270 RKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAKAKW------ 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M   +   L
Sbjct: 324 -WTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIMKELIGRDL 379


>gi|320010680|gb|ADW05530.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 385

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 133/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    G+        +     +++ K  A      A+       S       +  
Sbjct: 40  RDFYYKLAELGIFGIEVPEEYGG-AGEESFKFEAVLYEETARAGISFGGSGVHVLLCLPY 98

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    T    K W P   S                   + +TE   G+D+A + +  +  
Sbjct: 99  LKAYATEEQKKRWLPDFVSG-------------KSMYAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRV---GCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+ +          +  L+ D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTDAPKADDRRHGISLLVVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G + + T EL F +       LLG+ N     +        L  A+ + +  + ++ 
Sbjct: 206 DKLGLKVSDTAELAFVDVKVPVDDLLGEENKGFSYLGQNLPQERLGIAVGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAQQYTQDRTVFGKTVASFQNTKFELAACKAEVDAAEAVCDRAIEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG G++ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYTDNRVNRIYGGTSEVMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|317125699|ref|YP_004099811.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589787|gb|ADU49084.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 398

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 132/382 (34%), Gaps = 33/382 (8%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +  A++ +    G+   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQAIVDQMKEMGIFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIVNT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++ + E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMILQHGTEEQKQRYLPRMATGE-------------VRGAFSMSEPGCGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSPN---- 268
            S+  +  D         W  +   ++   +L + +         +   L D        
Sbjct: 142 KSKAVRDGDEWVINGQKMWLTNGGSANLVAVLVKTDTGADSVYKNMTTFLIDKESGFGET 201

Query: 269 --GLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAI 322
             G+       K+G +   T EL            L G+       + D   +  ++ A 
Sbjct: 202 AQGITVPGKIEKMGYKGVDTTELILDGHRTTDAQILGGEPGKGFYQMMDGVEVGRVNVAA 261

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 R +    I YA++R   G  ++D   +   +AD+A+ + A+  +  + A   D 
Sbjct: 262 RGCGVARRAFELGIAYAQQREAFGKKIVDHQAVLFRLADMAVKVEASHEMMVKAARKKDS 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A+ +A        +    V+ ++    GG GY +E  I R YRE+P   I
Sbjct: 322 GERNDLEAGMAKYLA-------SENCAQVVEDSFRIHGGYGYSKEYEIERLYREAPMLLI 374

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+ +   + +   L +   L
Sbjct: 375 GEGTADIQRMIIGRRLVEDYKL 396


>gi|332530495|ref|ZP_08406436.1| isovaleryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
 gi|332040064|gb|EGI76449.1| isovaleryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
          Length = 416

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 131/402 (32%), Gaps = 46/402 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           P     D+    P    L  R    GLH       +  V +   AH I    +   +   
Sbjct: 34  PCAAAIDRDNHFP--RELWARLGGIGLHGMTVAEEYGGVDLGYLAHIIAMEEVSRASASV 91

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    +    K + PK+ S E+                L ++E   
Sbjct: 92  GLSYGAHSNLCVNQIHRNGSEAQKKKYLPKLVSGEH-------------VGALAMSEPNA 138

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------------- 254
           G+D+ ++  + +  +       G  W  +   +D  ++ A+ +   G             
Sbjct: 139 GSDVVSMKLKAEPKNGFYLLSGGKMWITNGGDADVLVVYAKTDADDGSPHAALPPEGARP 198

Query: 255 ----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
                        +   + +    G  +    +K+G R + T  L F +        L  
Sbjct: 199 PSGGRAAGGGARGMTAFIVEKGWPGFTHGAKLDKLGMRGSNTYPLFFDHCEVPEANVLGG 258

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                + +   +  + A++S   +  M   +   + Y   R   G  + +  +M+  +AD
Sbjct: 259 VGHGAKVLMSGLDYERAVLSGGPLGIMAACMDAVLPYVHERQQFGQSIGEFQLMQGKLAD 318

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +     A  A  + +  + D A      A   R  A     +  + A  +  EA++ +GG
Sbjct: 319 MYSTWQACRAYVYAVGRACDSAAH----ARTLRKDAAGAILYAAEKATWMAGEAIQALGG 374

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            GY  +  + R +R++    I  G+     + +   L   T 
Sbjct: 375 VGYTRDFPVERLWRDAKLYEIGAGTSEIRRMLIGRELYAETA 416


>gi|302865185|ref|YP_003833822.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315501734|ref|YP_004080621.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302568044|gb|ADL44246.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315408353|gb|ADU06470.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 398

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 128/386 (33%), Gaps = 36/386 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R +  + +P+   +L      GL     D  +  +                  +  
Sbjct: 31  PHAQRLEHADEYPS--DILDGMREMGLFGLTIDEEYGGLGESLLTYALVVEELSRGWMSI 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A +++   +        P++ + E             V     ++E   G
Sbjct: 89  SGIVNTHFIVAYLISQHGSADQKARLLPRMATGE-------------VRGAFSMSEPECG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRL 261
           +D++AI S+  +  D         W  +   S     L + +       G +  FL+ + 
Sbjct: 136 SDVSAIKSKAVRDGDNYVLNGQKMWLTNGAYSSVVATLVKTDTGADSVYGNMSTFLLEKE 195

Query: 262 LEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
              G    GL      +K+G +   T E+            L            ++    
Sbjct: 196 PGFGETAPGLTIPGKIDKMGYKGVETTEMVLDGVTVPASAVLGGEEKVGRGFYQMMDGIE 255

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++ A  +      +   A+ YA++RH  G  L     +   +A++   I AA AL  
Sbjct: 256 VGRVNVAARACGISIRAFELAVAYAQQRHTFGQPLARHQAVAFKLAEMGTKIEAAHALMV 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +    EA  A+++A        +    V+ EA    GG GY +E  I R  
Sbjct: 316 NAARLKDAGQRNDVEAGMAKLLA-------SEYCAEVVQEAFRIHGGYGYSKEYEIERLM 368

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           RE+P   I  G+       +   L K
Sbjct: 369 REAPFLLIGEGTSEIQKTIISRGLLK 394


>gi|37912850|gb|AAR05190.1| predicted acyl-CoA dehydrogenases [uncultured marine
           proteobacterium ANT8C10]
          Length = 383

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 145/379 (38%), Gaps = 26/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--L 142
               P  + W+K    PA H L ++  + GL     +  F  +    +++   +     +
Sbjct: 20  KEINPYTDEWEKEGIFPA-HELFKKMGNLGLLGISREERFGGMGLDYSYETVFSEELGLI 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            +   A  +   +  +   ++L  +  + +D+               P     +   + +
Sbjct: 79  SSGGVAMAIGVQTNMATPSLSLHGSDELRRDFL-------------MPAISGDMVCSIAV 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D++AI +  +K  D         W  +S  +D   +LA             ++
Sbjct: 126 SEPSAGSDVSAIKTTAKKDGDDYIINGTKMWITNSTQADFICLLANTGEGNPHSNKSLII 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
              +  G+      NK+G RS+ T ++ F +      +L+G+         +      + 
Sbjct: 186 VPMNLPGISLSERFNKLGMRSSDTAQIFFDDVRVPQRYLIGEEGKGFRYQMEQFQEERIY 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++  +   + + I Y  +R   G  ++D  V+   +A++  ++ A  +L +     
Sbjct: 246 GAAGALKMLGQVIQDTIEYTSQRQAFGKSILDNQVVHFRLAELQTEVEALRSLVYDAVEG 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +   +  + +A+ A++ A        ++   V    ++  GG GY+ +  ++R +R+   
Sbjct: 306 YINGQDVTMKASMAKLKAG-------RLGREVTDSCLQYWGGMGYMWDTPVSRAFRDGRL 358

Query: 440 NSILLGSGNAMVLDVLNLL 458
            SI  G+   M+  +   +
Sbjct: 359 TSIGGGADEIMLGIICKHM 377


>gi|41056265|ref|NP_957475.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio
           rerio]
 gi|27882298|gb|AAH44447.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio]
 gi|182889740|gb|AAI65576.1| Acadl protein [Danio rerio]
          Length = 442

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 128/373 (34%), Gaps = 34/373 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +H  W         +  ++   GL           +              + +       
Sbjct: 87  YHAQWEKAGEVSREVWEKAGEHGLLGVYTPEEHGGIGGDLLSAAIVWEEQMYSNCSGPGF 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      ++   +    + + P++ + +                 + +TE   G+D+
Sbjct: 147 SLHSEIVMPYISHYGSKAQIERYIPQMAAGKC-------------IGAIAMTEPGAGSDL 193

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFLVPRLLEDGSPN 268
               +  +K     + L+G K F+++  MSD  I++A  +   +     +   L D    
Sbjct: 194 QGAKTFAKKDGTD-WILNGSKVFITNGWMSDVVIVVAVTDREAKTAAHGISLFLVDRGTK 252

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   K+G ++  T EL F +       LLG +N     + +      L  A+M +
Sbjct: 253 GYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQVNKGFYYLMNELPQERLLIAVMGL 312

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +       E+ +Y  +R   G  + D  V++  +A++  +I    A         D    
Sbjct: 313 ASCEFMFEESRNYVMQRKAFGRTIADLQVVQHKLAELKTEICVGRAF-------IDSCLQ 365

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E       A + KYW   +   V  + ++  GG GY+ E  IA+ + ++    I  G
Sbjct: 366 LHSEKKLDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGG 425

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   +
Sbjct: 426 TNEIMKELISRNI 438


>gi|254449900|ref|ZP_05063337.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus
           238]
 gi|198264306|gb|EDY88576.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus
           238]
          Length = 566

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 174/477 (36%), Gaps = 45/477 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +       L +  + +   L      G     V   P +    +     G        
Sbjct: 45  AKLSDEVLAPLQKSGDQHPAVLE----NGV----VRTSPGFGDGFKAIAEGGWIGISASP 96

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +            +   A L               +    +  +   + PK+ S E
Sbjct: 97  KNGGMGLPLTLATTVNDMMAGACLSLQLNPLMCQGQIEALEHHASDAIKDLYLPKLISGE 156

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE + G+D+ A+ S+ +   DG Y +SG K ++S   +D 
Sbjct: 157 WAGT-------------MNLTEPQAGSDVGALRSKAEPNDDGSYAISGQKIYISWADNDF 203

Query: 243 -----FIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++         +  F+VP+L+ D     G  N L    L++K+G   + T
Sbjct: 204 TENVCHLVLARLPDGVAGTKGISLFMVPKLIPDADGNPGERNDLRVVSLEHKMGLHGSPT 263

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +E++   G+L+G+ +     +  M     L  A   +     +   A+ YA  R    
Sbjct: 264 AVMEYAGAKGWLVGEKHAGLAAMFTMMNNARLGVATQGIGVAEAAYQHALAYAMDRKQGK 323

Query: 347 ----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA--AYARIMAPIT 400
               G + +   ++R +A +  DI  A A+S   A + D + +  +    A A ++ PI+
Sbjct: 324 AGGTGTIAEHADVRRMLASMKADIFTARAISLANAVAIDMSNATGDAGWKARAALLTPIS 383

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLLE 459
           K +   +   + +  ++  GG G+IEE   A++ R+    +I  G+     +D V   + 
Sbjct: 384 KAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMDLVARKMM 443

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL-TEKIALASSAA 515
            G +    L   +E    ++   +  +        +  +    +L T+ +    + A
Sbjct: 444 DGGDAAFALLDEIEAAAEAAKAAMPDLAEPVWQAAETLRETTEWLVTQDMTDRLAGA 500


>gi|302557332|ref|ZP_07309674.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302474950|gb|EFL38043.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 401

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 119/362 (32%), Gaps = 35/362 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  ELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINTHFIVAYMLKQHGTQEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + P+             M    +     ++E   G+D++AITS+  K  +        
Sbjct: 112 DHFLPR-------------MAAGDIRGAFSMSEPGLGSDVSAITSKAVKDGEEYVLNGQK 158

Query: 232 KWFLSSPMSDAFIMLAQ-----VEGRVGCFLVPRLLEDGSP------NGLCYQRLKNKIG 280
            W  +   S    +L +      +G      +   L +  P       GL      +K+G
Sbjct: 159 MWLTNGGTSSLVAVLVRSDEGHPDGTAPHKSMTTFLVEKEPGFGEVRPGLTVPGKIDKMG 218

Query: 281 NRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +   T EL            L G        + D   +  ++ A       + +    +
Sbjct: 219 YKGVDTTELIMDGLRIPADRVLGGVTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGV 278

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++RH  G  +     ++  +A++A  + AA A+    A   D  +    EA  A+ +
Sbjct: 279 QYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMAKYL 338

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        +    V+ +A    GG G+ +E  I R YRE+P   I  G+     + +  
Sbjct: 339 A-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPMLLIGEGTAEIQKMIIGR 391

Query: 457 LL 458
            L
Sbjct: 392 RL 393


>gi|295666560|ref|XP_002793830.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226277483|gb|EEH33049.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 430

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 118/325 (36%), Gaps = 37/325 (11%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S    + ++L   P     + P + S E                 L +
Sbjct: 107 FASSIGLSYAAHSQLCVNQLSLNGNPEQKAKFLPSLISGE-------------KVGALAM 153

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           +E   G+D+ ++ +  + +  G        W  + P +D  ++ A+ +   G   +   +
Sbjct: 154 SEHSAGSDVVSMKTTAKAVDGGYLLNGTKMWITNGPDADYIVVYAKTKPDAGSKGITAFV 213

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            + +  G    R  +K+G R + T EL F + F     +LG++N     + +   L  L 
Sbjct: 214 VEKTFKGFSCARKLDKLGMRGSNTGELIFDDVFVPQENVLGEVNRGVKVLMEGLDLERLV 273

Query: 320 SAIMSVSG----MRVSLAEA--------------IHYARRRHVSGGILIDQPVMKRAIAD 361
            +   + G     +    EA              + Y   R      +    +++  +AD
Sbjct: 274 LSAGPLGGKRGEGKAGKREAGSGSKIRTNTLDLVLPYTHTRKQFDAPIAHNQLIQGKLAD 333

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYA---RIMAPITKYWCCKMAPAVIAEAMEC 418
           +   ++A+ A ++  A   DEA +    ++     +        +  + A     +A++ 
Sbjct: 334 MYTKLSASRAYTYTTARQIDEAAASDSASSNNAIRKQDCAGAILYAAERATECALDAIQL 393

Query: 419 IGGSGYIEERSIARHYRESPANSIL 443
           +GG+GY+ E    R  R++    I 
Sbjct: 394 MGGNGYVNEIPAGRLLRDAKLYVIY 418


>gi|56800117|emb|CAI35166.1| acyl-Coenzyme A dehydrogenase, very long chain [Mus musculus]
          Length = 634

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/466 (18%), Positives = 173/466 (37%), Gaps = 56/466 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G            +        R A +  M  L     L +        + L  T   
Sbjct: 117 ELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQ 176

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P++ S                     LTE   G+D+A+I S       G  Y L+
Sbjct: 177 REKYLPRVASG-------------QALAAFCLTEPSSGSDVASIRSSAIPSPCGKYYTLN 223

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   +D F + A+   +          +   + + S  G+ +   + K+G ++
Sbjct: 224 GSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKA 283

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIH 337
           + T E+ F           NV     +  K+ +  L++    ++          +A+A+ 
Sbjct: 284 SNTSEVYFDGVKVPS---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVD 340

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +  V++  +A +A+      ++++ L+ + D+  K    EAA     
Sbjct: 341 HATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA----- 395

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +C + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V  
Sbjct: 396 --ISKIFCSEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFVAL 453

Query: 456 -NLLEKG------TNLFEQLFSTLEQDLGSSGKKVITI--LRDSISL-------CKEDKG 499
              ++KG       N  +  F  +   +G +GK++     +   +SL             
Sbjct: 454 QGCMDKGKELTGLGNALKNPFGNVGLLMGEAGKQLRRRTGIGSGLSLSGIVHPELSRSGE 513

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           LA    ++ A    A  L +     + + FL  R  D     + M+
Sbjct: 514 LAVQALDQFATVVEAK-LVKHKKGIVNEQFLLQRLADGAIDLYAMV 558


>gi|154248365|ref|YP_001419323.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162450|gb|ABS69666.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 626

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 93/567 (16%), Positives = 193/567 (34%), Gaps = 79/567 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY- 87
           P    M       +L  L  +      K LE +   ++    +E  +        L+   
Sbjct: 36  PPLRDMRF-----VLHELHGSAELSTLKGLEEVTPDLIDAVLEEAGKFVTEVLAPLNQSG 90

Query: 88  GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G  ++   V     +    +     G +    D  +       +       +     
Sbjct: 91  DLEGCTYENGVVRTPKGFKEAYKAFCEGGWNGIACDPQYGGQGLPASLNKLVEEMLCSGN 150

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L  G     +  +   +    +  +   + PK+    +             +  + LTE 
Sbjct: 151 LAFGICPGLTHGAYEALKNHASHELKDRFLPKMVDGVW-------------SGSMCLTEP 197

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVG 254
             GTD+  + ++ +   DG Y ++G+K F+S+   D       ++LA++         + 
Sbjct: 198 HCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIHLVLARLPDAPKGIKGIS 257

Query: 255 CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            FLVP+ L  EDGS    NG+    +++K+G   ++T ++ F    G+L+G+ +     +
Sbjct: 258 LFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAM 317

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             M     L      +     +   A+ YA+ R                  +I  P ++R
Sbjct: 318 FSMMNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPADPIIVHPDVRR 377

Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +  +        AL+  +A + D      +A+ R     +  +M PI K     +    
Sbjct: 378 TLMTMRAYNEGCRALAGWVARALDLMEHAEDAQERQRAEDFTALMTPIVKALFTDLGFEA 437

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            +  M+  GG GYI +  + ++ R++    I  G+     LD++                
Sbjct: 438 TSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDLVG-------------RK 484

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI----ALASSAAALYRAGMNDIAD 527
           L   +G   +     + + +    +D+ L   +T       AL  + A +   G+ D  +
Sbjct: 485 LPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEE 544

Query: 528 VFLENRFLDNCHSTHCMLHGRFNAAHI 554
                       + +  L G     ++
Sbjct: 545 A-------GAAATQYLRLFGMVALGYM 564


>gi|158315718|ref|YP_001508226.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111123|gb|ABW13320.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 385

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 139/368 (37%), Gaps = 28/368 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R +   GL        +  +    + ++R    L            + +  +  ++ 
Sbjct: 37  DLRRAAAAMGLFGFAVPEEYGGLGLDMSAEVRLVFELGYTTPAFRSMFGTNNGIAGHVLL 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + P I S E+                  LTE+  G+D A + +  ++  D
Sbjct: 97  EGATQEQKKAYLPLIASGEW-------------TAAFALTEENAGSDPAGLATSARRDGD 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+ +    G   +   + +    GL      +K+G  
Sbjct: 144 EWVINGAKRFITNAPLADVFMVFARTDPGAEGGHGITAFMVERDAPGLSVGPKDHKMGQA 203

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAI 336
              T ++  ++        + G+  V  G    M+ L    +  A + V   +  + E++
Sbjct: 204 GAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCLAHGRIHIAALCVGLAQRLVDESV 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   GG++    +++  +AD A D+ AA AL   +A  FD+           RI 
Sbjct: 264 SYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALVLDVAARFDDGSDT-------RIG 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               KY+  +    V   A++  GG+GY+    + R YR++    I  G+     + +  
Sbjct: 317 PSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLFRIYEGTSQIQQIVIAR 376

Query: 457 LLEKGTNL 464
            L +   +
Sbjct: 377 QLLRDAGV 384


>gi|238061948|ref|ZP_04606657.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237883759|gb|EEP72587.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 384

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 130/364 (35%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
           + ++R+    GL    +   +  +         A           A  L +     A  +
Sbjct: 39  YEVIRQMGKMGLFGLPFPEEYGGMGGDYFALCLALEELARVDSSVAITLEAAVSLGAMPI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P++ S E                G GLTE   G+D     ++     
Sbjct: 99  FRFGTVEQKERWLPRLVSGE-------------ALAGFGLTEPGTGSDAGGTRTRAVLDP 145

Query: 223 D-GIYCLSGHKWFLSSPMSDA---FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKN 277
               + ++G K F+++  +D      + A    R  G   +  ++      G       +
Sbjct: 146 STDEWVINGSKAFITNSGTDITALVTVTAVTGTRPDGSKELSTIIVPSGTPGFTVAPGYS 205

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T EL F +        L     G  + ++IL    +  A ++V   +  + E
Sbjct: 206 KVGWNASDTHELTFDDCRVPAANLLGERGRGFAQFLRILDEGRIAIAALAVGLAQGCVDE 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           +I YA +R   G  + +   ++  IAD+ L    A    +  A      +    +AA A+
Sbjct: 266 SIKYASQRQAFGQPIGNYQAIQFKIADMELKAHTARLAYYDAAARMLTGEPFKRQAAIAK 325

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A         +A     EA +  GG G++ E  +AR +R+S    I  G+     + +
Sbjct: 326 LHAST-------IAVDNAREATQIHGGYGFMNEYPVARFWRDSKILEIGEGTSEVQRMII 378

Query: 455 LNLL 458
              L
Sbjct: 379 ARDL 382


>gi|291334178|gb|ADD93846.1| acyl CoA dehydrogenase [uncultured marine bacterium
           MedDCM-OCT-S08-C116]
          Length = 596

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/483 (19%), Positives = 175/483 (36%), Gaps = 51/483 (10%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGG-ERWD--KVEFHPAWHALLRRSIHDGLHCS 118
             +     +E  ++A N   P  H+    G +R D  +V     +          G    
Sbjct: 33  RELADAVLEEAGKLAGNVIAPLNHSADTTGAKRLDDGEVRTPEGFCDAYAAMGEGGWTAM 92

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
                F          +  A   L         +   +T   + AL  +           
Sbjct: 93  EAAEKFGGQNLP--MTLTTAVNELWQSANMAFALCHLLTQGQIYALQKS----------- 139

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S E   T   PM +      + LTE + GTD+A I S+     D    ++G K +++  
Sbjct: 140 ASPELQQTFIPPMVEGRWTGTMNLTEPQAGTDLAGIKSRAVPHGDHF-LITGQKIYITYG 198

Query: 239 MSDA-----FIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNR 282
             D       ++LA+          +  F+VP+ L D +     PN L    ++ K+G +
Sbjct: 199 EHDMAENIIHLVLARTPDAPEGMKGISVFIVPKFLPDDAGNYTKPNDLRCLSIEKKLGIK 258

Query: 283 SNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            + T  +++       G+L+G  N     +  M     +   +  ++    +  +A  YA
Sbjct: 259 GSPTAVMQYGEAGGAVGYLVGAENHGIDIMFAMMNHARIAVGLQGLAISERAYQQARGYA 318

Query: 340 RRRHV-------SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS----- 387
           + R          G  +++ P + R +  +  +I A  AL    A + D+A+  S     
Sbjct: 319 KDRVQGVPLDGKKGDAIVNHPDVLRLLGSMKAEIEAMRALMMVGAAAMDKARHASANGKN 378

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A A ++ PI K W  + +  + ++A++  GG G+IEE   A+HYR++    I  G+ 
Sbjct: 379 DHEARAGLLIPIIKGWMTERSLDITSDALQIHGGMGFIEETGAAQHYRDARILPIYEGTT 438

Query: 448 NAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
                 L     +         L   ++ ++ +      + +  +     E    AR + 
Sbjct: 439 AIQANDLVFRKTIRDNGAAVNSLLDEIDSEMTALMNHQNSEIVSAAENIVEANNTARKVA 498

Query: 506 EKI 508
             I
Sbjct: 499 AHI 501


>gi|300784791|ref|YP_003765082.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299794305|gb|ADJ44680.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 133/382 (34%), Gaps = 35/382 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  +   GE             L R++   GL    +              +  A   
Sbjct: 27  PHLDDWERDGE---------LPRDLHRKAGDLGLLGVAFPEEIGGGDGNYLDALVVAEEM 77

Query: 142 LMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A    G   S      +   +A    P   + W               P  +      
Sbjct: 78  HYAGGSGGLFASLFTCGIAVPHIAEANDPVQIERWV-------------RPALQGDKIGS 124

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+A I +   +  D  Y ++G K F++S     F+      G  G   + 
Sbjct: 125 LAVTEPDGGSDVAGIRTTAVREGDE-YVINGAKTFITSGCRADFVTTVVRTGGDGAHGLS 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            ++ +    G    R   K+G   + T EL + +       L+G  N     V    +  
Sbjct: 184 LIVVERGTPGFTVSRKLEKMGWLCSDTAELSYVDVRVPVEHLVGAENSGFAQVATQFVTE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A+ + +  + +L   + + R R   G  LI + V++  + ++A  I  A   + + 
Sbjct: 244 RLSLAVQAYAHAQRALDLTLDWCRLRETFGRPLISRQVVQHKLTEMARKIDVARTYTRQA 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A      +    EA +A+  A     W       V++EA++  GG GY+ E  + RHYR+
Sbjct: 304 AIRHVSGEEVIAEACFAKNTAVEAAEW-------VVSEAVQLHGGLGYMRESEVERHYRD 356

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+   +       L
Sbjct: 357 VRILGIGGGTTEILTGLAAKRL 378


>gi|302537930|ref|ZP_07290272.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446825|gb|EFL18641.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 380

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 134/384 (34%), Gaps = 32/384 (8%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAA 138
           +   L  Y       D +    AW    R +   GL        +         +    A
Sbjct: 22  HKEVLPHYEQW--EKDGIVSRDAW----RAAGRQGLLGLAVPEEYGGGGNPDFRYAAVLA 75

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             +  A      +   +      +  + T    + W P   S E                
Sbjct: 76  EEFTRAGAPGLAIGLHNDIIGPYLTSLGTEEQKRRWLPGFCSGE-------------TIT 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257
            + +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  I++A+     G   
Sbjct: 123 AIAMTEPGAGSDLQGIRTSAEDRGDH-WLLNGSKTFISNGILADLVIVVAKTTPEGGAHG 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +  L+ +    G    R  +KIG +S  T EL F++       LLG+LN +   +     
Sbjct: 182 LSLLVVERGAEGFERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELNGAFVHLMTNLA 241

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A+ +++     L     Y + R   G  L     ++  IA++A + A       
Sbjct: 242 QERMGIAMAAIAAAEHLLEITTTYVKEREAFGRPLAKLQHIRFEIAEMATECAVTRTF-- 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D   +         + A + K+W  ++   V    ++  GG GY+ E  +AR +
Sbjct: 300 -----LDRCITDHANGELDHVHASMAKWWATELQKRVADRCLQLHGGYGYMTEYRVARAF 354

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
            +    +I  G+   M   +   L
Sbjct: 355 TDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|118467998|ref|YP_888269.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169285|gb|ABK70181.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 377

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 136/379 (35%), Gaps = 27/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P      +      L                A +  A      A    
Sbjct: 22  PYARDVDEQERFPE--EAWQALCAADLPGLAHPTELGGSDGDLAAQAIAVEELSAACAST 79

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  +      V    +  + K   P +                +V  G  LTE  GG
Sbjct: 80  AMVLLVNWAGTCTVIHQGSDELKKLVVPDV-------------STGAVGAGWCLTEPTGG 126

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++ I ++ Q+           ++  ++   D F +LA+  G    F V   +   S  
Sbjct: 127 SDLSGIRTKAQRDGSDWVLNGQKRFISNADWGDWFAVLAR-SGEENEFGV--FMVHKSDA 183

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL +   + K+G R + T ++   +       ++GD       + D         A  ++
Sbjct: 184 GLSFGPPEKKMGLRGSPTADVILEDCRIPGERVVGDPTQGYKYIIDELNGSRALIAAQAL 243

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  AI Y   R   G  L    +++  +AD A+ + +A+AL ++  ++ +    
Sbjct: 244 GLAKGALRTAIEYTAERRQFGSALSTFQMVRAMVADAAIRVESASALLYKAVDAIENKDP 303

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R      AR +  + K  C   A AV  +A++ +GG G+  E  + R  R++    I  G
Sbjct: 304 R------ARSLVSMAKVLCSDNAMAVTTDAVQLLGGYGFTREYPVERMMRDAKVTQIYEG 357

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           S     L +   L KG  L
Sbjct: 358 SNQIQRLVISKGLYKGEAL 376


>gi|327309784|ref|YP_004336682.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326955119|gb|AEA28815.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 387

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 139/383 (36%), Gaps = 28/383 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++   +P    ++      GL   +    +  +                  +  
Sbjct: 26  PVARDWEREGRYPT--EIVAGMRELGLFGLVIPEEYGGLGADNVSFALTFEEISRGWMGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++     S+ M+A   T    + + P++ +              +   G+ LTE   G
Sbjct: 84  AGILGSHSVSSWMLAHHGTEEQKQKYLPELATG-------------ARRTGIALTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGS 266
           TD+  IT+  ++  D         W  ++  +D   +L + +         +  LL +  
Sbjct: 131 TDLQGITTVAKRDGDDYVVNGTKMWITNARHADPLPVLVKTDPAATPAHRGMSILLVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
             G        K+G +   + E+  ++        L G                 ++ A 
Sbjct: 191 SAGFEVTADIGKLGYKGTESCEVVLADVRVPASQLLGGVEGRGLQQALSALETGRINIAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV   + +  EA+ YAR R   GG + +   ++  +A++A+ + +A  +++  A+  DE
Sbjct: 251 RSVGVAQRAYDEALSYARERTAFGGPIGEFQAIQLRLAEMAVALQSARLMTYWAASRMDE 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E+  A+I A        + A +   +AM   GG GY  E  + R YR++P  SI
Sbjct: 311 GVRMDTESGMAKIAA-------SEAALSCAMDAMRIHGGYGYSTEFEVERLYRDAPLMSI 363

Query: 443 LLGSGNAMVLDVLNLLEKGTNLF 465
             G+ + +   V   L  G  + 
Sbjct: 364 GEGTNDVLRTVVAKSLLAGKAVI 386


>gi|326779196|ref|ZP_08238461.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326659529|gb|EGE44375.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 388

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 149/409 (36%), Gaps = 41/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ L+   +EL R          A+     +  D  E H   + ++R     GL    + 
Sbjct: 4   DHRLTAEHEELRRTVEAF-----AHDVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFP 58

Query: 122 RSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +     A  I    L  +    A  L +     A  + L  T    + W PK+ +
Sbjct: 59  EEYGGMGGDYLALGIALEELARVDSSVAITLEAGVSLGAMPLHLFGTEEQKRQWLPKLCA 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM 239
            E                  GLTE  GG+D     +          + ++G K F+++  
Sbjct: 119 GE-------------ALGAFGLTEPDGGSDAGGTRTTAVLDEATDEWVINGSKCFITNSG 165

Query: 240 SDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D    + +  V GR   G   +  ++      G       +K+G  ++ T EL F++  
Sbjct: 166 TDITELVTVTAVTGRKEDGRPRISAIIVPSGTPGFTVAAPYSKVGWNASDTRELSFTDVR 225

Query: 296 GFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349
                 L     G  + ++I   LD   +++S +   LA     E++ YA  RH  G  +
Sbjct: 226 VPASNLLGEEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVKYAAERHAFGRAI 282

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IAD+ +    A       A+     +   +EAA       I K +   +A 
Sbjct: 283 GTNQAIQFKIADMEMRAHMARVGWRDAASRLVAGEPFKKEAA-------IAKLYSSTVAV 335

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               EA +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 336 DNAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|226308694|ref|YP_002768654.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187811|dbj|BAH35915.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 396

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 137/380 (36%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   ++++    GL     D  +  +                  +    +++
Sbjct: 34  QELEHSDTYPTDIVKQMKDMGLFGLTIDPEYGGIGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M++   TP     + P++ S E             +     ++E   G+D+AA
Sbjct: 94  THFIVAHMISAHGTPEQKAKYLPRLASGE-------------LTGAFSMSEPALGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE--GRVGCFLVPRLLEDGSP--- 267
           I+++ ++   G Y ++G K +L++  S   + +L + +         +  +L +      
Sbjct: 141 ISTKAKRTESGDYVITGQKMWLTNGGSSTLVAVLVKTDEGAEKPHNNLTTILIEKPAGFG 200

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL       K+G +   T E+ F          L G   +    + D   +  ++ 
Sbjct: 201 EVLPGLTIPGKLEKMGYKGIDTTEMIFDGFEIGAEEVLGGTPGLGFRHMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +    + +   A+ YA++R   G  + +   +   IA++   + AA  +    A   
Sbjct: 261 AARACGIAQRAFELAVTYAKQRETFGKPIAEHQAIAFRIAEMGTKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +     A  A+ +A        +    V  ++    GG GY +E  I R  RE+P  
Sbjct: 321 DSGERNDVAAGMAKYLA-------SEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAPFL 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+ +     +   L +
Sbjct: 374 LIGEGTSDIQKQIISKGLLR 393


>gi|289663077|ref|ZP_06484658.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 382

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 147/396 (37%), Gaps = 40/396 (10%)

Query: 70  AQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q++AR        P    +   GE        P     +R    +GL        +   
Sbjct: 12  IQDVARRIAQEKIAPSAEQFDRSGE-------FPL--ENIRLLGENGLMGIEVPAEYGGA 62

Query: 128 VR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ +    +       +  +   +    + +    +    + +   I    +   
Sbjct: 63  GMDPISYALAMIEIAAADGAHSTIVSVNNSLFCTGILKNGSEAQKQLYVRAIAEGTH--- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245
                          LTE + G+D +A+  +  K +DG + ++G K W  S P++   ++
Sbjct: 120 ----------IGAFALTEPQSGSDASAMRCRAVKQADGSFFINGKKSWITSGPVAKYIVL 169

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A  E   G   +   + D    G    + + K+G R++AT E+EF++        L V 
Sbjct: 170 FAVTEPDKGSRGITAFMVDTERAGFHRGKTEPKLGIRASATCEIEFADYVAQSDEVLGVE 229

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
               +    +  LD+  + ++   V +A A +     Y + R   G  +    + +  IA
Sbjct: 230 GEGFKTA--MSVLDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   + AA  L+ R A    + +    EAA A++ A        + A  +  +A++  G
Sbjct: 288 DMKCKLDAALLLTLRAAWLKGQGQKFGTEAAVAKLTA-------SEAAMWITHQAVQIHG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G GY +E  + R++R++    I  G+     L +  
Sbjct: 341 GMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIAR 376


>gi|121611018|ref|YP_998825.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555658|gb|ABM59807.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 141/395 (35%), Gaps = 38/395 (9%)

Query: 82  PQLHAY-GPGGERWDKVE--FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           P+  A+        DK     H AW         + +++  +G  C      +      Q
Sbjct: 9   PEHQAFADSFRRFIDKEISPHHAAWEDQGHVSREVWQQAGANGFLCMSMPEEYGGAGADQ 68

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
            + +        A          S   A  +    +      + P             PM
Sbjct: 69  LYAVAQIEEIARAGCTGIGFGLHSEIVAPYILRYGSAEQKSRYLP-------------PM 115

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV 249
              ++   + ++E   G+D+  I +Q  + +DG  Y L G K F+++   +D  I++A+ 
Sbjct: 116 ASGAMIGAIAMSEPAAGSDLQGIQTQAIQSADGSHYLLRGSKTFITNGWHADLVIVVAKT 175

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +   G   +  LL +    G    R   K+G ++  T EL F N        L       
Sbjct: 176 DPAAGAKGISLLLVERGMPGFEAGRRLKKVGLKAQDTAELFFDNVRVPAGNLLGGPALQG 235

Query: 310 EDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                L+       L  AI +V+  + ++   + Y ++R V G  +      +  +A++ 
Sbjct: 236 RGFICLMEQLPWERLQIAITAVAAAQAAIDSTVDYVKQRQVFGQPVAAFQNTRYTLAELQ 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++  A     +      + K  S  A+ A       KYW   +   V+ E ++  GG G
Sbjct: 296 TEVQVARVFVDKCCELLLQQKLDSASASMA-------KYWTTDLQCKVMDECVQLHGGYG 348

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y+ E  IAR Y ++    I  G+   M   +   +
Sbjct: 349 YMWEYPIARAYADARVQRIYGGTNEIMKEVIARAM 383


>gi|226364603|ref|YP_002782385.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243092|dbj|BAH53440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/391 (20%), Positives = 149/391 (38%), Gaps = 32/391 (8%)

Query: 75  RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           R A  +  P L  +   G+  D+         + R++   GL     +  F         
Sbjct: 24  RFAERDVAPHLREWADAGQ-VDR--------DVYRQAGKLGLLGINVEERFAGGGTDD-- 72

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                R   +   E   + +P    A ++ L     +   +   + + E       P+  
Sbjct: 73  ----FRFNAIVIEELCRVGAP----AVVMGLAGINDLVTPYLASLANEEQKHRFLTPLCT 124

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D+ AI++      D +  L+G K F+S+ M +D  I+ A+ +  
Sbjct: 125 GEKIGAIAMTEPGAGSDLGAISTTAVVDGDDL-VLNGTKIFISNGMLADFVIVAAKTDPA 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309
            G   V  L+ +   +G        K+G  +  T EL F +     G +LG+ N   G +
Sbjct: 184 AGKKGVSLLVVEAGMDGFTRNGPLPKVGLSAQDTAELVFDDVRVPRGNVLGEPNAGFGYL 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L  A+ S++ MR +  +A+ Y   R   G  + D    +  +A++A +I  A
Sbjct: 244 RHNLPQERLSVAVTSMASMRRTFDQALTYICDRTAFGRRVADFQANRFYLAELATEIEIA 303

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              +       D     +       + A + K+W  ++   V+  A++  GG GY+ E  
Sbjct: 304 QCFT-------DRCILDAAHGTLDEVTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYD 356

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A+ Y +     I  G+   M   +   L +
Sbjct: 357 VAQDYLDCRGGPIYAGTTEIMKEIIGRRLTR 387


>gi|32130423|sp|P51174|ACADL_MOUSE RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|20071667|gb|AAH27412.1| Acyl-Coenzyme A dehydrogenase, long-chain [Mus musculus]
 gi|187465939|emb|CAQ52312.1| acyl-Coenzyme A dehydrogenase, long-chain [Mus musculus]
          Length = 430

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           +                +          S      +A
Sbjct: 87  REVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIA 146

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + +                 + +TE   G+D+  + +  ++   
Sbjct: 147 NYGTKEQIEKFIPQMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKRSGS 193

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++   SD  I++A    E R     +   L +    G    R  +K+G
Sbjct: 194 D-WILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMG 252

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 253 MKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRN 312

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 313 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHETKRLDSGSA 365

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  E ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 366 SMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQ 425

Query: 458 L 458
           +
Sbjct: 426 I 426


>gi|87199246|ref|YP_496503.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134927|gb|ABD25669.1| acyl-CoA dehydrogenase-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 394

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 126/363 (34%), Gaps = 28/363 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVA 163
            +L      GL        F       +  I   +    A       +S ++  + S + 
Sbjct: 44  DILAEMREMGLFGITIPEEFGGAGMNISQYIETVKQLSYASPAFRSTISINIGMTGSAIK 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP    +W P+I S E                  GLTE   G+D AA+ +   +  +
Sbjct: 104 NFGTPEQKAEWLPRIASGE--------------IACFGLTEPGSGSDSAAMQTMAVRDGN 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G       ++  +SP +   +++A+           V   + D +  G+   +   K+G 
Sbjct: 150 GYRLNGTKRYITNSPSAKIGLIMARTSKEALPRNAHVSAFIVDMTAPGISIGKPDKKMGQ 209

Query: 282 RSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                 ++   +        + G+                L  A M V   R +L  AI 
Sbjct: 210 SGAQIADVIMEDVHVPGSALVGGEEGRGFQIAMQSLDNGRLSVAGMGVGMGRRALDTAIR 269

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  + +  +++  +AD   ++ AA  +        D  +S   +AA A    
Sbjct: 270 YATERKAFGEAIANFQLIQAMLADSEAELYAAECMIADACARADRGESVQRKAAAA---- 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +    V+   ++  GG+GY+ E    R +R++    I  G+   M L +   
Sbjct: 326 ---KLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFRDARILRIYEGTSQIMQLQIAKH 382

Query: 458 LEK 460
           L +
Sbjct: 383 LLR 385


>gi|115524260|ref|YP_781171.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518207|gb|ABJ06191.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 387

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 131/368 (35%), Gaps = 22/368 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W+K +  PA H L ++    G         +       ++ +      +MA+ 
Sbjct: 22  INPHVDEWEKAQIFPA-HELFKKLGELGFLGLNKPVEYGGQGLDYSYAL------MMAEE 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +  +   M TP + +       S E      AP         +G++E  
Sbjct: 75  LGAINCGGVPMAIGVQTDMATPALARFG-----SDELRREFLAPSIAGDFVACIGVSEPS 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A+I +      D      G  W  +   +D   +LA             +     
Sbjct: 130 AGSDVASIKTNAVGDGDDYVINGGKMWITNGTQADWICLLANTGEGPKHRNKSLICVPMK 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+   R  +K+G  S+ T ++ F N        +     G +  M       L  A  
Sbjct: 190 TKGVTIARKLDKLGMHSSDTAQIFFDNVRVPKRNRIGEEGFGFMYQMVQFQEERLWGAAA 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     ++   I Y R R   G  L+D  V+   +A++  ++    +L +R A +    
Sbjct: 250 CLKAHERTIQNTIDYTRERKAFGQSLLDNQVVHFRLAELQTEVELLRSLVYRAAEALVAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  ++       +A + K    ++   +    ++  GG G++ E  ++R YR+S   SI 
Sbjct: 310 QDVTQ-------LATMAKLRAGRLGRELPDACLQFWGGMGFMNETLVSRAYRDSRLTSIG 362

Query: 444 LGSGNAMV 451
            G+   M+
Sbjct: 363 GGADEVML 370


>gi|23956084|ref|NP_059062.1| very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Mus musculus]
 gi|6648069|sp|P50544|ACADV_MOUSE RecName: Full=Very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; AltName: Full=MVLCAD; Short=VLCAD; Flags:
           Precursor
 gi|2765125|emb|CAA72435.1| very-long-chain acyl-CoA dehydrogenase [Mus musculus]
 gi|5123855|emb|CAA94919.2| very-long-chain Acyl-CoA dehydrogenase [Mus musculus]
 gi|20071669|gb|AAH26559.1| Acyl-Coenzyme A dehydrogenase, very long chain [Mus musculus]
 gi|56800118|emb|CAI35167.1| acyl-Coenzyme A dehydrogenase, very long chain [Mus musculus]
 gi|148680576|gb|EDL12523.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_c [Mus
           musculus]
          Length = 656

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/466 (18%), Positives = 173/466 (37%), Gaps = 56/466 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRV 170
             G            +        R A +  M  L     L +        + L  T   
Sbjct: 139 ELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQ 198

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229
            + + P++ S                     LTE   G+D+A+I S       G  Y L+
Sbjct: 199 REKYLPRVASG-------------QALAAFCLTEPSSGSDVASIRSSAIPSPCGKYYTLN 245

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   +D F + A+   +          +   + + S  G+ +   + K+G ++
Sbjct: 246 GSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKA 305

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIH 337
           + T E+ F           NV     +  K+ +  L++    ++          +A+A+ 
Sbjct: 306 SNTSEVYFDGVKVPS---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVD 362

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A  R   G  + +  V++  +A +A+      ++++ L+ + D+  K    EAA     
Sbjct: 363 HATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA----- 417

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
             I+K +C + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V  
Sbjct: 418 --ISKIFCSEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFVAL 475

Query: 456 -NLLEKG------TNLFEQLFSTLEQDLGSSGKKVITI--LRDSISL-------CKEDKG 499
              ++KG       N  +  F  +   +G +GK++     +   +SL             
Sbjct: 476 QGCMDKGKELTGLGNALKNPFGNVGLLMGEAGKQLRRRTGIGSGLSLSGIVHPELSRSGE 535

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           LA    ++ A    A  L +     + + FL  R  D     + M+
Sbjct: 536 LAVQALDQFATVVEAK-LVKHKKGIVNEQFLLQRLADGAIDLYAMV 580


>gi|329940354|ref|ZP_08289635.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329300415|gb|EGG44312.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 404

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 124/382 (32%), Gaps = 39/382 (10%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   + D  +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQKIVDGLKELGLFGLMIDEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + PK+   E                   ++E   G+D++AI
Sbjct: 95  HFIVAYMLKKHGTQEQKDYFLPKMALGE-------------TRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--------CFLVPRLLEDGS 266
           TS+  +  D         W  +   S    +L + +               +   L +  
Sbjct: 142 TSKAVRDGDDYVLNGQKMWLTNGGSSTLVAVLVRSDEGHSPEEAAAEPHKSMTTFLVEKE 201

Query: 267 P------NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI 316
           P       GL       K+G +   T EL            L G        + D   + 
Sbjct: 202 PGFGEVRPGLTIPGKIEKMGYKGVDTTELIMDGLRVPADRVLGGVTGRGFYQMMDGVEVG 261

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A       R +    I YA++RH  G  +     ++  +A++A  + AA A+    
Sbjct: 262 RVNVAARGCGVARRAFELGIDYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNA 321

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE
Sbjct: 322 ARKKDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYRE 374

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +P   I  G+     + +   L
Sbjct: 375 APMLLIGEGTAEIQKMIIGRRL 396


>gi|311104938|ref|YP_003977791.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759627|gb|ADP15076.1| acyl-CoA dehydrogenase, middle domain protein 5 [Achromobacter
           xylosoxidans A8]
          Length = 608

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 94/508 (18%), Positives = 178/508 (35%), Gaps = 63/508 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVE 98
            L  L      +     E +   ++    +E  R        L          W   +V 
Sbjct: 13  ALNELAGLGEVLKLPGFEEVTPDLVDAILEENGRFVEQAVAPLNVPGDTQPPVWKDGQVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    R     G        ++      +   + AA    +        + P +T 
Sbjct: 73  TTPGYAQGFRDYAAGGWQGLQHPVAWGGQGLPK--LVAAAPGENIQAASLAFSLCPMLTD 130

Query: 159 ASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + AL  + +    K + P++   ++  T             + LTE + G+D+A + +
Sbjct: 131 GVIEALLTVGSEAQRKQYVPQLIGGKWTGT-------------MNLTEPQAGSDLAQVAT 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED- 264
           +  K +DG Y LSG K F++    D       ++LA+          +  F+VP+ L   
Sbjct: 178 RAVKQADGSYRLSGQKIFITYGDHDLAENIIHLVLARTPDAPAGVKGISLFIVPKFLVQA 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEF--------SNTFGFLLGDLNVSTGPVEDM 312
               G  N +    L++K+G   + T  L +            G+L+G+ N     +  M
Sbjct: 238 DGSLGKRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEVGEGAIGYLVGEQNRGLEYMFIM 297

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIAL 364
                       +     +   A+ YAR R              ++  P ++R +  +  
Sbjct: 298 MNAARYSVGQQGIGVSERACQHALAYARERVQGRAVEGSAAAVAIVRHPDVQRMLMTMKA 357

Query: 365 DIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
              AA A+S+  A + D+       + RS   A+   M PI K +  + A  V +  ++ 
Sbjct: 358 LTEAARAVSYVTAAAHDKGTHHPDPEQRSRNRAFYEYMVPIVKGFSTETAVEVASLGLQV 417

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
            GG GYIEE   A++YR++    I  G+       L        G        + + + L
Sbjct: 418 HGGMGYIEETGAAQYYRDARILPIYEGTTAIQANDLVSRKTQRDGGATAHAAIAAMRETL 477

Query: 477 GS---SGKKVITILRDSISLCKEDKGLA 501
            +     K+     ++ + L +++   A
Sbjct: 478 RAVETEAKRASAGEQEGLRLLRDNLDSA 505


>gi|224044913|ref|XP_002194919.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 456

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 135/379 (35%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ I  A      
Sbjct: 93  KEINPFVDKWEEEGQFPA-HKVFKILGQAGFLGVDKPTEYGGMGLDFSYNIAVAE----- 146

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G++    +  A  V A M TP +      +  S E       P         LG++
Sbjct: 147 --ELGNVRCGGIPMAIGVQAGMATPAL-----TRFGSHELKKQFLVPTIAGDFVACLGIS 199

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A I +   +  D      G  W  S   +D   +LA             +  
Sbjct: 200 EDGAGSDVANIKTTAVRKGDEYVINGGKMWITSGSQADWMCLLANTSKGPPHQNKSLICL 259

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
             +  G+   +  +K+G RS+ T ++ F +       L+G+                L  
Sbjct: 260 PMNLPGIHVAKKIDKLGMRSSDTAQIFFEDVRVPCKNLIGEEGKGFTYQMLQFQEERLWG 319

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              +++ M   + E I Y  +R V G  ++    +   +A++A ++    +L  R    +
Sbjct: 320 VATALTPMETIIQETIDYTGQRKVFGQPVLHNQTVHFRLAELATEVELLRSLLHRAVALY 379

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E    ++        A + K    ++   V    ++  GG G+  E  ++R YR+    
Sbjct: 380 VEGNDVTK-------FASMAKLKAGRLTREVTDSCLQFWGGMGFTNEVLVSRFYRDLRLM 432

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+   M+  +   ++
Sbjct: 433 SIGGGTDETMLSIICKYMD 451


>gi|62510481|sp|Q60HI0|ACADL_MACFA RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|52782177|dbj|BAD51935.1| acyl-Coenzyme A dehydrogenase, long chain [Macaca fascicularis]
 gi|90085619|dbj|BAE91550.1| unnamed protein product [Macaca fascicularis]
          Length = 430

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 126/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         +  ++   GL           +     +          +     
Sbjct: 73  IPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYYAAVVWEEQAYSNCSGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSVHSGIVMSYITNYGSEEQIKHFIPQMTAGKC-------------IGAIAMTELGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+   SD  I++A    E       +   L +  
Sbjct: 180 DLQGIKTNAKKDGSD-WILNGSKVFISNGWLSDVVIVVAVTNHEAPSPARGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F +       LLG+ N     +        L  A M
Sbjct: 239 MKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGEENKGFYYIMKELPQERLLIADM 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +VS       E  +Y ++R   G  +     ++  +A++   I    A         D  
Sbjct: 299 AVSASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV-------DNC 351

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 352 LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|17545644|ref|NP_519046.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427937|emb|CAD14627.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 594

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/427 (19%), Positives = 177/427 (41%), Gaps = 57/427 (13%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            +      +   I  A + ++        + P +T  ++ AL+T  +    + + PK+ S
Sbjct: 97  EYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEAQKQLYVPKLIS 154

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE + G+D+A + ++ + + DG + + G K F++    
Sbjct: 155 GEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTFKVFGTKIFITWGEH 201

Query: 241 D-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+  G       +  F+VP+ L +     G+ N +    +++K+G +++
Sbjct: 202 DMAGNIVHLVLARTPGAPEGVKGISLFVVPKFLVNADGSLGARNDVHCVSIEHKLGIKAS 261

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  L+F +     G L+G+ N     +  M         +  +     +  +A+ YAR 
Sbjct: 262 PTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSERAYQKAVAYARE 321

Query: 342 RHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-- 390
           R  S            +I  P +KR +  +      A AL++  A + D     +++A  
Sbjct: 322 RVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACDAGHHAADDATR 381

Query: 391 ----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    + P+ K W  +M+  V +  ++  GG G+IEE   A++YR++    I  G+
Sbjct: 382 KQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGT 441

Query: 447 GNAMVLDVLNL--LEKGTNLFEQLFSTLEQ---DLGSSGKKVITILRDSISLCKED-KGL 500
                 D++    +  G  +   + + + +    L + G      +R  +   +E  + +
Sbjct: 442 TAIQANDLIGRKTVRDGGAVALGICAEIARVEAQLSAKGGAHCEAMRQRLGAGREALESV 501

Query: 501 ARFLTEK 507
            RF+  +
Sbjct: 502 VRFVVAQ 508


>gi|331699922|ref|YP_004336161.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326954611|gb|AEA28308.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 387

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 139/383 (36%), Gaps = 28/383 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++   +P    ++      GL   +    +  +                  +  
Sbjct: 26  PVARDWEREGRYPT--EIVAGMRELGLFGLVIPEEYGGLGADNVSFALTFEEISRGWMGI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++     S+ M+A   T    + + P++ +              +   G+ LTE   G
Sbjct: 84  AGILGSHSVSSWMLAHHGTEEQKQKYLPELATG-------------ARRTGIALTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGS 266
           TD+  IT+  ++  D         W  ++  +D   +L + +         +  LL +  
Sbjct: 131 TDLQGITTVAKRDGDDYVVNGTKMWITNARYADPLPVLVKTDPAAAPAHRGMSILLVEAD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
             G        K+G +   + E+  ++        L G                 ++ A 
Sbjct: 191 SAGFEVTADIGKLGYKGTESCEVVLTDVRVPASQLLGGVEGRGLQQALSALETGRINIAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV   + +  EA+ YAR R   GG + +   ++  +A++A+ + +A  +++  A+  DE
Sbjct: 251 RSVGVAQRAYDEALRYARERTAFGGPIGEFQAIQLRLAEMAVALQSARLMTYWAASRMDE 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E+  A+I A        + A +   +AM   GG GY  E  + R YR++P  SI
Sbjct: 311 GVRMDTESGMAKIAA-------SEAALSCAMDAMRIHGGYGYSTEFEVERLYRDAPLMSI 363

Query: 443 LLGSGNAMVLDVLNLLEKGTNLF 465
             G+ + +   V   L  G  + 
Sbjct: 364 GEGTNDVLRTVVAKSLLAGKAVI 386


>gi|330468024|ref|YP_004405767.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810995|gb|AEB45167.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 380

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/391 (21%), Positives = 150/391 (38%), Gaps = 35/391 (8%)

Query: 75  RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            +A+    P++  +   GE        P    +LR     GL    +   +    +    
Sbjct: 21  ELADRELAPRVVEHEQRGE-------FP--REVLRTLGRAGLLGLPYPEEYGGAAQPYEV 71

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            ++   +     L     +S    S   VA   T    +   P +   E           
Sbjct: 72  YLQVLEILAGRWLTVAEAVSVHTLSCYPVAAFGTDEQ-RSLLPDMIGGE----------- 119

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +     L+E +GG+D AA+T++  +  D         W   +  +D + +  +  G  
Sbjct: 120 --LLGAYCLSEPQGGSDAAALTTKAARDGDEYVVTGTKAWITHAHTADFYNIFCRT-GGP 176

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  LL D +  G+  Q  +  +G RS+   +L F +       L+G          
Sbjct: 177 GPKGISCLLADRATPGIAPQTAERTMGLRSSPVAQLVFDDARVPADRLIGGEGKGFTIAM 236

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A  +V   + +L  A+ YAR R   G  +I+   +   +AD+A  I+AA 
Sbjct: 237 AALDSGRLGIAACAVGLAQAALDYAVTYARERQQFGRAIIEFQGLGFTLADMATQISAAR 296

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           AL+   A   D  +  S EAA A       K +   +A  V  +A++ +GG+GY+ +  +
Sbjct: 297 ALTLAAARLRDAGRPYSIEAAKA-------KLFATDVAMRVTTDAVQVLGGAGYVADHPV 349

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R++RE+    I+ G+     + +   L KG
Sbjct: 350 ERYFREAKVLQIVEGTNQIQRMVISRALAKG 380


>gi|726095|gb|AAC52329.1| long-chain acyl-CoA dehydrogenase [Mus musculus]
          Length = 430

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           +                +          S      +A
Sbjct: 87  REVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTRAGFTLHSDIVMPYIA 146

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + +                 + +TE   G+D+  + +  ++   
Sbjct: 147 NYGTKEQIEKFIPQMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKRSGS 193

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++   SD  I++A    E R     +   L +    G    R  +K+G
Sbjct: 194 D-WILNGSKVFITNGWLSDLVIVVAVTNREARWPAHGISLFLVENGMKGFIKGRKLHKMG 252

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 253 MKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRN 312

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 313 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHETKRLDSGSA 365

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  E ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 366 SMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQ 425

Query: 458 L 458
           +
Sbjct: 426 I 426


>gi|323166669|gb|EFZ52427.1| aidB domain protein [Shigella sonnei 53G]
          Length = 312

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 96/278 (34%), Positives = 148/278 (53%), Gaps = 1/278 (0%)

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + DG  N +  +RLK+K+GNRSNA+ E+EF +  G+LLG        +  M  +   D A
Sbjct: 1   MPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCA 60

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL FRLA ++D
Sbjct: 61  LGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWD 120

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R YRE P NS
Sbjct: 121 R-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNS 179

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           I  GSGN M LDVL +L K   +++ L     +  G        + R    L K  + L 
Sbjct: 180 IWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELG 239

Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           R +T ++ L    A + +     ++  + +        
Sbjct: 240 REITHQLFLLGCGAQMLKYASPPMSQAWCQVMLDTRGG 277


>gi|289425895|ref|ZP_06427647.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187]
 gi|289427857|ref|ZP_06429561.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165]
 gi|295131736|ref|YP_003582399.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Propionibacterium acnes SK137]
 gi|289153671|gb|EFD02380.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187]
 gi|289158740|gb|EFD06940.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165]
 gi|291376151|gb|ADE00006.1| acyl-CoA dehydrogenase, C-terminal domain protein
           [Propionibacterium acnes SK137]
 gi|313771550|gb|EFS37516.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL074PA1]
 gi|313808615|gb|EFS47075.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA2]
 gi|313811949|gb|EFS49663.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA1]
 gi|313819041|gb|EFS56755.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA2]
 gi|313821682|gb|EFS59396.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA1]
 gi|313823818|gb|EFS61532.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA2]
 gi|313826921|gb|EFS64635.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA1]
 gi|313832381|gb|EFS70095.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL007PA1]
 gi|313834186|gb|EFS71900.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL056PA1]
 gi|314926157|gb|EFS89988.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA3]
 gi|314960996|gb|EFT05097.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA2]
 gi|314975048|gb|EFT19143.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA1]
 gi|314977459|gb|EFT21554.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL045PA1]
 gi|314979047|gb|EFT23141.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA2]
 gi|314985836|gb|EFT29928.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA1]
 gi|314985975|gb|EFT30067.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA2]
 gi|314989281|gb|EFT33372.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA3]
 gi|315081392|gb|EFT53368.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL078PA1]
 gi|315084968|gb|EFT56944.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA2]
 gi|315087499|gb|EFT59475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA3]
 gi|315089593|gb|EFT61569.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA1]
 gi|315096911|gb|EFT68887.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL038PA1]
 gi|327332978|gb|EGE74710.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA2]
 gi|327333970|gb|EGE75685.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA3]
 gi|327449121|gb|EGE95775.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA2]
 gi|328757723|gb|EGF71339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL020PA1]
 gi|332676601|gb|AEE73417.1| acyl-CoA dehydrogenase [Propionibacterium acnes 266]
          Length = 382

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|16127623|ref|NP_422187.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221236440|ref|YP_002518877.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13425103|gb|AAK25355.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220965613|gb|ACL96969.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 603

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/526 (16%), Positives = 178/526 (33%), Gaps = 59/526 (11%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--VEFHP 101
             L   FP      +  + E   +  +  LA +              G R +   V   P
Sbjct: 39  ERLADAFPEADADTVAAVLEAAGAFASDILAPLNRQG-------DLVGARLENGVVRTAP 91

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    ++    G                +  ++    +   A +  G     S+ +   
Sbjct: 92  GFADAYQQFAQGGWTSLAAPAEHGGQGLPKTLEVAVLEMVQAANMAFGLCPMLSLGAIEA 151

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +P     +  K+ S E+  T             + LTE + G+D+AA+T+     
Sbjct: 152 LELCGSPEQKAKYLGKLVSGEWTGT-------------MNLTEPQAGSDLAALTTMATPD 198

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGCFLVPRLLED----------G 265
            DG + ++G K +++    D       ++LA+  +   G   +   L            G
Sbjct: 199 GDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKGISLFLAPKVLVGDDGKLG 258

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N L    L++K+G   + T  + F      L+G L      +  M     L      V
Sbjct: 259 PANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLPNMFVMMNAARLQVGTQGV 318

Query: 326 SGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +    +  +A+ +++ R              L D P ++R +  +   I AA  +    A
Sbjct: 319 AIAERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTLVLMKAHIEAARGICLSTA 378

Query: 378 NSF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            +        +A +R+       ++ PI K W   +   V ++ ++  GG G+IEE   A
Sbjct: 379 VAADLARAAPDAATRTAAKLREELLTPIAKAWSTDIGVWVASQGVQIHGGMGFIEETGAA 438

Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           +HYR++    I  G+     +D++   L+         L   +   +       +  +  
Sbjct: 439 QHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDDIRDTIDLLKASDLKSVGL 498

Query: 490 SIS-----LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +             L     + +  A + A  Y+  + D+   ++
Sbjct: 499 RLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVVGGWM 544


>gi|329888332|ref|ZP_08266930.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328846888|gb|EGF96450.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 375

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 149/380 (39%), Gaps = 36/380 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P    W+    +P    L R     G+       +F     +  +   A  L  +A  +
Sbjct: 23  TPNARAWEVEGRYPD--DLFRDLAALGMMGMTAPAAFGGA--EADYVSYALALMELAAGD 78

Query: 148 AGHLMSPSVTSASMVA---LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            G     SV +A +VA      T      + P +   E                   LTE
Sbjct: 79  GGLSTVVSVHNAPVVAALVREGTESQKATFLPSLCGGEM-------------IGAFALTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D AA+T++  +           ++  S   +   I+ A     +G   +   L  
Sbjct: 126 SGAGSDAAALTTRAIQEGGDWRINGAKQFITSGRTAGLTIIFAVTNPVLGKKGLTAFLVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
               GL   ++++K+G  ++ T  L+F +    +L D     G  E  +I +       +
Sbjct: 186 SGAKGLLVDKVEHKMGQHASDTCALKFED---LILNDGLRLGGEGEGYRIALANLETGRI 242

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  SV   + +L  A+ YAR R   G  ++D   +   +AD+A  + AA  L    A+
Sbjct: 243 GIAAQSVGMAQSALEVAVKYARERVAFGKPIMDHQAVGFRLADLAARLEAARQLVLHAAS 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D  +   +EA+ A+++A        + A AV + A++ +GG GY+EE  +A+ YR+  
Sbjct: 303 TKDAGRPCLKEASMAKLIA-------SETAEAVCSGAIQTLGGYGYLEEFGLAKIYRDVR 355

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+ +   + +   L
Sbjct: 356 VCQIYEGTSDIQRMVIARAL 375


>gi|312602128|ref|YP_004021973.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169442|emb|CBW76454.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 596

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/471 (18%), Positives = 166/471 (35%), Gaps = 63/471 (13%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE------RWDKVE 98
             ++  P      LE           +E A+ A      L      G+          V 
Sbjct: 21  DAVSRLPGYEDATLE-----TAQAVLEEAAKFAER---VLAPLNRTGDTQPSTWADGAVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    R+    G    +    F      +        ++  A L        +  +
Sbjct: 73  TTPGFKQAYRQYTQGGWQAVVHPPEFGGQGLPKLIATACNEMFNAANLSWALCPLLTDGA 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +      + PK+ + E+  T             + LTE + G+D++ + ++ 
Sbjct: 133 IETLLTAGSDGQKACYLPKLIAGEWTGT-------------MNLTEPQAGSDLSLVRTRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS- 266
           ++ +DG Y L G K F++    D       ++LA+          +  F+VP+ L  G  
Sbjct: 180 ERQADGTYKLFGTKTFITYGEHDMADNIVHLVLARTSDAPPGVKGISLFIVPKFLLGGDG 239

Query: 267 ----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319
                N +    +++K+G +++ T  L+F +     G L+G+ N     +  M       
Sbjct: 240 LPGTRNDVDCVSIEHKLGIKASPTAVLQFGDHGGAIGELVGEENRGLEYMFIMMNSARFS 299

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAAT 370
             +  V+    +  +A  YA  R  S            +   P +KR +  +   I  A 
Sbjct: 300 VGVQGVAIAERAYQQAAAYAAERVQSRPVDGSAKQAVTIDQHPDVKRMLMTMRALIEGAR 359

Query: 371 ALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +L++  A++ D A    +       A     + PI K W  +++  V +  ++  GG G+
Sbjct: 360 SLNYFAASACDIAHRHPDASVRQQYARRYEFLVPIVKGWSIELSVEVASMGVQVHGGMGF 419

Query: 425 IEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE 473
           +EE   A+HYR++    I  G+       L     +  G  +   L   + 
Sbjct: 420 VEETGAAQHYRDARILPIYEGTTAIQANDLVGRKTVHDGGAVARGLCEHIA 470


>gi|63101323|gb|AAH95591.1| Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Danio
           rerio]
          Length = 424

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 43/399 (10%)

Query: 69  TAQELAR-MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             QE+AR  A     P   +Y   G      E+      L++R+   GL           
Sbjct: 50  EFQEVARKFAREEIVPAAPSYDRSG------EYP---FPLIKRAWELGLMNGHIPEDCGG 100

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +                        +  +      V +       K +  ++        
Sbjct: 101 MGLGIFDACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNDAQRKKYLGRMT------- 153

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +     +TE   G+D+A I  +  K  D         W  +   ++ + +L
Sbjct: 154 ------EEPLMCAYCVTEPGAGSDVAGIKIRAVKKGDDYVINGQKMWITNGGKANWYFLL 207

Query: 247 AQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    C         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 208 ARTDSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDV---VIPKEN 264

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G     KI +          A  +    + +L EA  YA  R   G  + +   +  
Sbjct: 265 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSF 324

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ +  A     R A   D  +  +         A I K +   +A    ++A++
Sbjct: 325 LLAEMAMKVELARMAYQRAAWEVDMGRRNT-------YYASIAKAFAGDIANQCASDAVQ 377

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 378 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISR 416


>gi|314965935|gb|EFT10034.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA2]
 gi|327328790|gb|EGE70550.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL103PA1]
          Length = 382

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  + ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|297566220|ref|YP_003685192.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296850669|gb|ADH63684.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 578

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/440 (18%), Positives = 156/440 (35%), Gaps = 45/440 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL+++   GL        +  +   +      A         +      +      +   
Sbjct: 65  LLKKAGELGLLGVEVSEEYGGLDLPKTVSTVIAEGLSPTGGFSVSYGVQTSIGLLPLVYW 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      +  K+ S E             +     LTE + G+D     ++ +   DG 
Sbjct: 125 GTKEQKDRYLAKLVSGE-------------LIAAYCLTEPQSGSDAMGAKTRAELSEDGK 171

Query: 226 Y--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y        W  ++  +  F + A+ +       +   L +    GL     + K+G +S
Sbjct: 172 YYIINGTKMWISNAGFAHLFTVFAKTKE-----GLTAFLVERDTPGLRLGGEEKKMGIKS 226

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++ F +    +   LG+L        ++  +        ++ G + +LA +  YA+
Sbjct: 227 SSTRQVFFEDVKVPVENVLGELGKGHKIAFNVLNVGRYKLGAGAIGGAKEALALSAKYAK 286

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYARI--- 395
            R   G  + +  ++++ +A++A  I A  +  +R     DEA +     EA  A I   
Sbjct: 287 ERVAFGQPIANFGLIQQKLAEMASRIFAGESAVYRTMGLIDEAIAGKTGTEAVLAGIEEY 346

Query: 396 --MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K    ++    + E ++  GG GY  E +I R YR+S  N I  G+     L 
Sbjct: 347 AVEASIIKVLGSEILDYAVDEGVQIHGGYGYSGEYAIERAYRDSRINRIFEGTNEINRLL 406

Query: 454 VLNLLEKGT--------NLFEQLFST-LEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           +  +L +          +   +L    LE        K +  L +   L     GLA   
Sbjct: 407 IPGMLLRRAMKGELPLVDAAMRLQRELLEPSFDEPEDKEMAELENLKKLVLMIAGLAAMK 466

Query: 505 ------TEKIALASSAAALY 518
                  E+  LA +A  L 
Sbjct: 467 WGTKVEEEQEVLAVAADILI 486


>gi|325105307|ref|YP_004274961.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974155|gb|ADY53139.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 591

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/447 (16%), Positives = 152/447 (34%), Gaps = 35/447 (7%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              L+ ++   GL        +    +     +    +       A  L + +      +
Sbjct: 58  MQELMDKAGELGLLAVSIPEEYGGFGKNFNTSMLVTDIIGAGHSFAVALSAHTGIGTLPI 117

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--K 220
                      + PK+ S E             +     LTE   G+D  +  ++     
Sbjct: 118 LYYGNEEQKNKYIPKLASGE-------------LKAAYCLTEPNSGSDANSGKTKATLNP 164

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +   +D FI+ A++E       +   + + +  G+     ++K+G
Sbjct: 165 EGSHYLINGQKMWITNGGFADIFIVFARIEDDK---NLTAFIVERNFGGISMNPEEHKMG 221

Query: 281 NRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            + ++T ++ F++    +   L     G    + IL    +     ++   R  +  AI+
Sbjct: 222 IKGSSTRQIFFNDCPVPVENMLSERGNGFKIAVNILNIGRIKLGAATIGSSRKVIDTAIN 281

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL------------ANSFDEAKS 385
           YA  R   G  +     ++  +A++A    A  + ++R             A+  D AK+
Sbjct: 282 YANERVQFGLQISKFGAIRYKLAEMATRNFAIESATYRAGQNIDDAYNGLVASGMDSAKA 341

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + +      +   I K W  +M   V+ E ++  GG G+  E  + R YR+S  N I  G
Sbjct: 342 KLKSTEEFAVECAIIKVWGSEMLDYVVDEGVQIYGGMGFSAEAPMDRAYRDSRINRIFEG 401

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARF 503
           +     L ++++L K     E    T  Q + S            D      E K L   
Sbjct: 402 TNEINRLLIVDMLLKRAMKGELDLMTPAQTVASELMSIPDFNTGEDETLFAAEKKILKNL 461

Query: 504 LTEKIALASSAAALYRAGMNDIADVFL 530
               + +A +A       +    ++ +
Sbjct: 462 KKAGLMIAGAAVQKLMMTLAKEQEILM 488


>gi|229488857|ref|ZP_04382723.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324361|gb|EEN90116.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 389

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 127/371 (34%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+ +  PA   L++R     L        F  +      ++ A           
Sbjct: 31  PGAAARDESKEFPA--QLVKRLGQQDLMGISVPEEFGGLGLSTRTQLVAIEEVARTDAAL 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +        + +  +      W P++ S E             +  G  LTE   G
Sbjct: 89  ASIYTAHYLGLEPILVGGSEEQKHRWLPQLASGE-------------LLAGFALTEPDAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DIA++ +  ++  DG +      +  ++  +D  ++ A+ +   G   +   +      
Sbjct: 136 SDIASMRTVARREDDGWHLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVVPKGTP 195

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y   ++K+G RS  T  +   +    L   +G                 +D A M+ 
Sbjct: 196 GISYSEPQDKMGIRSAPTYTVYLDDVVLPLDSVIGTEGRGGNIALTALNRARIDVAAMAN 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                +      YA  R   G  + D   ++  +      +  +   +   A+  D  + 
Sbjct: 256 GIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLVTSRVTADWAADVKDAGQD 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                      A I+KY   +   +++ + ++  GG+G++ E  I R YR+     I  G
Sbjct: 316 IRRA-------ASISKYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRILRIFEG 368

Query: 446 SGNAMVLDVLN 456
           +    +L +  
Sbjct: 369 TSQIQLLTIAG 379


>gi|111022678|ref|YP_705650.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822208|gb|ABG97492.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 134/376 (35%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQL 146
           P G   D+ +   P    +  ++   G+   +    F              +  L     
Sbjct: 32  PRGREVDEADVVTPV--DIFAKAAAVGITDFMIPEEFGGGGMGDVFTQCLVQEELCWGDP 89

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G+L+  +   +  + ++ T    K W   +         KAPM        L  TE  
Sbjct: 90  GIGNLLCSNGFFSDPIMVLGTEEQKKQWLGPLTGP------KAPMT------SLATTEPG 137

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A+I +  +++  G        W  ++  +  +++ A+ +       V   L +  
Sbjct: 138 SGSDAASIVTTAERVDGGYRLSGQKAWISNAGAAQFYVVFAKTDRTQRSGGVSAFLLEKG 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIM 323
             G+ +     K+G R+    E+ F N F      L         +     +  +     
Sbjct: 198 AEGMTFGEPMKKMGQRAIVCREIFFDNVFVPEENRLGEEGQGFYGLMGTFDISRVVLGAA 257

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   R +   A+ YA+ R   G  +I+   +   +AD+A  I +A  L    A   D  
Sbjct: 258 AVGAARAAYEYALDYAKTRKQFGVPIIEHQAVAFRLADMATRIESARLLVHHAARIIDSG 317

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +       AR +A + K    + A  V   A++ +GG GY  E  + +  R+     I 
Sbjct: 318 GN-------ARGIAAMAKLTASETAMFVTHAAVQTLGGWGYSREYPVEQWMRDVKLEEIE 370

Query: 444 LGSGNAMVLDVLNLLE 459
            G+ + M L +   L+
Sbjct: 371 EGTSDIMKLVISRNLD 386


>gi|288556703|ref|YP_003428638.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288547863|gb|ADC51746.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 382

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 135/376 (35%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W+K    P    +  +   +GL C      +  +     +               
Sbjct: 28  PHYEKWEKDGLIP--RDIWYKLGGEGLLCPWLPEEYGGMGADFGYSFVLIEELERIGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +           W PK  + E                 + +TE   G
Sbjct: 86  VGVPLHNDVVVPYLWHYGNEEQKGRWLPKCATGE-------------AVTAVAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRV--GCFLVPRLLEDG 265
           +D+ AI +      D  Y L+G K F+S+ +  D F+++ + + R       +  L+ DG
Sbjct: 133 SDLQAIKTTAILDGD-SYVLNGSKTFISNGLHGDLFVVVCKTDPRAEPARAGISLLVVDG 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    +  +K+G RS  T+EL F +       LLG+       + +      L  AI
Sbjct: 192 NSEGFIKGKKLDKVGLRSQDTLELTFEDVRVPKENLLGEAGKGFYYLMEQLQQERLIVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+   V+L   + Y + R   G  +      +  + ++A            L      
Sbjct: 252 AAVTAAEVTLDSTLTYVKERKAFGKPVGSFQHNQFTLVELATKGEIGRTFLHSLVERHMR 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +E + A+        W   +A   ++  ++  GG GY+EE  +AR  R+ P ++I
Sbjct: 312 GEDVVKEVSMAKW-------WLTDLAKETVSTCVQLHGGYGYMEEYEVARRSRDIPVSAI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   +
Sbjct: 365 YAGTNEIMKTIIAKKM 380


>gi|119476369|ref|ZP_01616720.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119450233|gb|EAW31468.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 591

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 91/504 (18%), Positives = 184/504 (36%), Gaps = 60/504 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E  + A      L+      G +   + V     +    ++ +  G      
Sbjct: 36  ELVDTVLEEAGKFAVGVLAPLNTAGDLNGAQCVDNAVVETAGFSQAYQQFVDGGWAALPG 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           +  +  +   ++  + A  ++  A +  G     S  + + +    +  +   +  K+ S
Sbjct: 96  NPEYGGMGLPESVGLAAMEMWAAANMSFGLCPMLSQGAINAIESHASASIKNTYLEKMIS 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+                + LTE   G+D+A I S      D  Y ++G K +++    
Sbjct: 156 GEW-------------TGAMNLTESDAGSDLAVIRSSALPEKD-YYRINGTKIYITWGDH 201

Query: 241 D-----AFIMLAQVE------GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
                   ++LA+          +  FLVP+ L +     G  N +    +++K+G   +
Sbjct: 202 QMTENVVHLVLARTPNAPEGVKGISLFLVPKFLVNSDGSIGDRNDVYAVSVEHKLGIHGS 261

Query: 285 ATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F       G+L+G+ N     +  M     L+     V+    +  +A  YA+ 
Sbjct: 262 PTCVMSFGENEGAIGYLIGEENKGLAYMFTMMNHARLNVGGQGVAVSDRAYQQAAAYAKD 321

Query: 342 RHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAY 392
           R             +I  P ++R +  +     A+ AL +  +++FD A      +E   
Sbjct: 322 RVQGQAPGDREKGSIIRHPDVRRMLMVMRSLTEASRALCYVTSSAFDHAHHAVDKQERTL 381

Query: 393 ARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A      + PI K W  ++A  V +  ++  GG G+IEE   A+  R++   +I  G+  
Sbjct: 382 ANFRGELLTPIAKGWSTEVAQEVSSLGLQVHGGMGFIEETGAAQFMRDARITTIYEGTTG 441

Query: 449 AMVLDVLN--LLEKGTNLFEQLFSTLEQD---LGSSGKKVITILRDSISLCKEDKGLARF 503
               D +   L+      F +L   +      L   G +  TI    I   K  + L+ +
Sbjct: 442 IQANDFVGRKLMRDEGREFGRLIEEVRATSDLLSVGGAEFSTITASLIEGAKTLEELSGW 501

Query: 504 LT------EKIALASSAAALYRAG 521
           L       +++  A +   L   G
Sbjct: 502 LLPRAKNNQQLPGAVAVNLLMAVG 525


>gi|288803247|ref|ZP_06408681.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica
           D18]
 gi|288334288|gb|EFC72729.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica
           D18]
          Length = 577

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 157/433 (36%), Gaps = 44/433 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +  +   GL      R +  +          + L   A     ++ S        +  
Sbjct: 93  ENIEATRQAGLWGVSMPRRYGGLNLPNVVFSMMSELIAAADAGFQNIWSLQSC-IDTLYE 151

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
                  + + P+I   E                 + LTE   G+D+  +  +      +
Sbjct: 152 FGDEEQRQKFIPRICEGEMM--------------SMDLTEPDAGSDLQRVMLKATFDEKE 197

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G  
Sbjct: 198 NCWRLNGVKRFITNGDSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVDVRHIEHKLGIH 257

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            + T EL + N    L G   +     V  +     L  A  SV   + +  E + YA+ 
Sbjct: 258 GSPTCELVYKNAKAELCGSSRMGLIKYVMALMNGARLGIAAQSVGLEQEAYNEGLAYAKD 317

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA----------- 390
           R   G  +++ P +   ++ +   + A  +L ++ A   D  K+  + A           
Sbjct: 318 RAQFGKKIVNFPAVYDMLSRMKAKLDAGRSLLYQTARYVDIYKALEDIARDQKLTPEERQ 377

Query: 391 ------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A    P+ K    + A     +++   GGSG+I E    R YR++   SI  
Sbjct: 378 EMKKYTRLADAFTPLAKGINSEYANQTAYDSISIHGGSGFIMEYKCQRLYRDARIFSIYE 437

Query: 445 GSGNAMVLDVLNLLEKGTNLF---EQLFSTLEQD----LGSSGKKVITILRDSISL--CK 495
           G+    V+  +  +  GT L    E L   L  D    L     K++ +  +++      
Sbjct: 438 GTTQLQVVAAVRYITNGTYLSIMKEMLEGELSCDCMKGLRDRVAKLVQLYEEAVEKVNAS 497

Query: 496 EDKGLARFLTEKI 508
           E++ +  FL  ++
Sbjct: 498 ENQDVHDFLARRL 510


>gi|225874379|ref|YP_002755838.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225792680|gb|ACO32770.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 612

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/471 (17%), Positives = 162/471 (34%), Gaps = 45/471 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMV 162
             L+R++   GL           +   +      A  +  +A           + +  +V
Sbjct: 68  RKLMRKAGDLGLLGVDVPEDCGGLALDKVTSAIVAENISRLASFSVAFSAHVGIGTLPLV 127

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--K 220
               T    + + P++ S E+                  L+E   G+D   I ++     
Sbjct: 128 -WYGTEEQQQKYLPRLASGEW-------------IAAYALSEASSGSDAMNIRTRATLSP 173

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                       W  ++ +++ F + A++    +           L +    GL     +
Sbjct: 174 DGQHYVLNGEKMWITNAGVANLFTLFARIVDPADPDPAHTQFSAFLIERDTPGLTVGPEE 233

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R ++T  L  S+       LLG+         ++  +         + G + SLA
Sbjct: 234 HKLGIRGSSTCPLILSDCRVPVANLLGEAGKGHHIAFNILNIGRFKLGAACLGGAKHSLA 293

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAA 391
           ++I YAR R   G  + +  ++++ IAD A  I    ++++R   + D A +    E+AA
Sbjct: 294 DSIAYARDRKAFGKSITEFGLIQQKIADAAARIFMGESMTYRAIGAIDAALAAIPPEQAA 353

Query: 392 YAR----------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            +R          I   I K W  +M   V    ++   G GY+E+    R +R++  N 
Sbjct: 354 GSREIQKRIEAYAIECSILKVWASEMLGIVTDHGVQIHAGYGYVEDYPAERAWRDARINR 413

Query: 442 ILLGSGNAMVLDVLNLLEKGTN-----LFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           I  G+     L +   L K        L   +   +E+ L            D ++    
Sbjct: 414 IFEGTNEINRLIISGFLMKRAVSGQLPLLPAIQKLMEEVLAPPSLSAAPDTSDPLAREAG 473

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
               A+ +T    L ++  A  + G   I    +     D     + +   
Sbjct: 474 LLAAAKKIT----LFAAGVASQKYGSALINQQEIMAALADLTTEVYALQSA 520


>gi|103487794|ref|YP_617355.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977871|gb|ABF54022.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 391

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 152/403 (37%), Gaps = 32/403 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             T + LA        +     P  +RW+     P    L +++   G+    +   +  
Sbjct: 15  GETHEALAASVRRFVER--EIAPNIDRWEAEGELP--RELHKKAAEAGILGLRYPEQYGG 70

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREY 183
             +            +   L     ++         +LMT    H    P I    S   
Sbjct: 71  HSKG---------FDIFHGLVVTEELAAVGAGGLGASLMT----HGIGLPPILALGSDHL 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                 P+      I LG+TE  GG+D+A + +   +  D  Y ++G K F++S M   +
Sbjct: 118 KQRVAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGD-SYIVNGDKMFITSGMRADW 176

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           +  A   G  G   +  LL D    G+   RL +K+G R + T  + FS+       L+G
Sbjct: 177 LTCAVRTGGPGAGGISLLLIDMDSPGVERTRL-DKMGWRCSDTAAIHFSDVRVPVENLIG 235

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             N     +        L  A+   +  RV++AEA  +A+ R   G  L+    ++  +A
Sbjct: 236 PENGGFIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLA 295

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+   I A  A     A    E K R  + A  ++ A        +M  AV  EA + +G
Sbjct: 296 DMERQIEATQAWVDLCAWQVKEGKDRPADFAMLKVQA-------TRMLEAVAREAAQVLG 348

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G+ YI    + R YRE   N+I  GS   M+      L  G  
Sbjct: 349 GASYITGSKVERIYREVRVNAIGGGSEEIMLDLAGRQLFGGKR 391


>gi|332815352|ref|XP_516063.3| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 463

 Score =  244 bits (624), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 127/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + +H  W         +  ++   GL           +                +     
Sbjct: 106 IPYHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGP 165

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 + +TE   G+
Sbjct: 166 GFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKC-------------IGAIAMTEPGAGS 212

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+  +SD  I++A    E       +   L +  
Sbjct: 213 DLQGIKTNAKKDGSD-WILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENG 271

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 272 MKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIADV 331

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y ++R   G  +     ++  +A++   I    A         D  
Sbjct: 332 AISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV-------DNC 384

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 385 LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIY 444

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 445 GGTNEIMKELIAREI 459


>gi|241661733|ref|YP_002980093.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240863760|gb|ACS61421.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 384

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 134/371 (36%), Gaps = 28/371 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGH 150
           E W++ E  P   AL R +   GL    +   +         ++         A      
Sbjct: 35  EAWEEAETFP--RALYREAADLGLLGIGFPEEYGGTPGDLFLELAMIEELTRAASGGLLA 92

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +      A  +    +  +     P I S E                 L +TE  GG+D
Sbjct: 93  SLFSHSIGAPPIVAGGSAELKARVLPAILSGE-------------KISALAITEPSGGSD 139

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +A +T++  +  D  Y ++G K F++S M   +I +A   G  G   +  LL +G   GL
Sbjct: 140 VANLTTRAVRDGDH-YVVNGSKIFITSGMRADYITVAVRTGGAGAGGISVLLVEGDTPGL 198

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               LK K+G   + T +L F +     G LLG  N     V        L  A+ +   
Sbjct: 199 TRTPLK-KMGWWCSDTAQLHFDDCRVPLGNLLGKENHGFELVMRNFNHERLALAMQAYGL 257

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R  L EA+ +A +R   G  L+   V ++ +  +A  I A  AL   L        +  
Sbjct: 258 ARTCLTEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDLMRRMQAGDAPL 317

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            +    +  A  +  +C   A       ++ +GG G++      R YRE     I  G+ 
Sbjct: 318 AQLCMLKNFATQSLQFCADTA-------VQLLGGMGFMRGTKAERIYREVKVYMIGGGAE 370

Query: 448 NAMVLDVLNLL 458
             +       L
Sbjct: 371 EVLSDLAARQL 381


>gi|254427489|ref|ZP_05041196.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193658|gb|EDX88617.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 385

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 144/398 (36%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P    W+     P  H + ++    GL        F  
Sbjct: 4   TQEHEELRRTVRNF--VDKELNPHVREWEDAGRFP-IHEVFKKMGDLGLLGVTKPEEFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ +  +     +        +   +  +   +A   +  + +D+          
Sbjct: 61  MGLDYSYGMVMSEEMGRVHCGGVPLAVGVQTDMATPAIARFGSDELRRDYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
               AP     +   + ++E   G+D+AA+ +   K  D         W  +SP +D F 
Sbjct: 112 ----APAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDDYLINGTKMWITNSPSADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           +LA             ++      G+   +  NK+G RS+ T ++ F N       L+G 
Sbjct: 168 LLANTSDAKPHVNKSLIVVPKDAAGITVDKPLNKLGMRSSETAQVFFDNVRVPQRNLIGQ 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             L +A  S+ GM   + E I YA+ R V G  LID   +   +A+
Sbjct: 228 EGMGFMMQMMQFQEERLFAAANSLKGMEHVIDETIAYAKDRKVFGMSLIDNQSVHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++    +   K           +A + K    +++  V    ++  GG
Sbjct: 288 LQTEVEALRALTYQACEMYVNGKD-------VLQLASMAKLKVGRLSREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ E    + YR+    SI  G+   M+  +   ++
Sbjct: 341 NGFMWENPAGQLYRDGRLGSIGGGADEVMLGIICKTMD 378


>gi|299533479|ref|ZP_07046859.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718536|gb|EFI59513.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 385

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 152/412 (36%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + ++ +++   E V     +ELA       P + A+   G       + P    + R   
Sbjct: 10  AWMNADIDAFREQVSRYIERELA-------PHVPAWRAQG-------YVP--REIWRGFG 53

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D  +       A+++       + + E   + S    ++  +    T    
Sbjct: 54  TYGFLLPEMDEQWGGGGGNLAYQLVVQEE--LTKAEVHAITSVHTIASHYLLAYGTEEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P++ S E             +  G+ +TE   G+D+ A+ ++ Q+  +  Y ++G 
Sbjct: 112 QRWLPRLCSGE-------------LLAGIAMTEPSVGSDLKAMRTRAQRDGEH-YVINGS 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  +   +++A   G  G   V  ++ E  +  G    R   KIG   + T EL 
Sbjct: 158 KTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRVGRRLGKIGQHISDTAELF 217

Query: 291 FSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L G        +        +   + + + + +++A  + Y ++R   G
Sbjct: 218 FEDLRIPVSHLLGGTEGQGFKQLMSQLPYERMLLGVSAAAAIEMAVALTVDYTQQRKAFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D    +  +A+ A       +          +    +E A  A+        WC +
Sbjct: 278 QTIADFQNTRFKLAECATTAHVVRSFVNDCIQRLLDGTLDNEAAYMAKW-------WCSE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ E ++  GG GY+EE  IAR Y ++    I  G+   M   +   L
Sbjct: 331 QQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQKIYGGANEIMKDLIARRL 382


>gi|111021608|ref|YP_704580.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821138|gb|ABG96422.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 134/372 (36%), Gaps = 29/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D+    PA   L++R     L        F  +      ++ A           
Sbjct: 25  PGAAFRDETREFPA--ELVKRLGEQDLMGISVPEEFGGLGLSTKTQLIAIEEVARTDAAL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +        + +  T    + W P++ S E             +  G  LTE   G
Sbjct: 83  ASIYTAHYLGLEPILVGGTEEQKRRWLPRLASGE-------------LLAGFALTEPDAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DIA++ +  ++  DG +      +  ++  +D  ++ A+ +   G   +   +      
Sbjct: 130 SDIASMRTTARREDDGWHLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVLPQGTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G RS  T  +   +    L  D  V T        L  L+ A + V+ M
Sbjct: 190 GVSYSEPQDKLGIRSAPTYTVFLDDV--VLPPDAVVGTEGRGGNIALTALNRARIDVAAM 247

Query: 329 RVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              +A         YA  R   G  + +   ++  +      + A+   +   A+  D  
Sbjct: 248 ANGIALRAWELGRSYAAERKQFGHPIAEFQAIQLLLGACDAQLVASRVTADWAADVKDAG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                  A  R  A ++KY   +   +++ + ++  GG+G++ E  I R YR+     I 
Sbjct: 308 -------ADLRRAASVSKYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRILRIF 360

Query: 444 LGSGNAMVLDVL 455
            G+    +L + 
Sbjct: 361 EGTSQIQLLTIA 372


>gi|54025518|ref|YP_119760.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017026|dbj|BAD58396.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 380

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 137/399 (34%), Gaps = 29/399 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + +  A+EL ++      ++ A  P  +  +K E +PA   +       GL    +  
Sbjct: 5   RLLPTEEARELIQLTRDIADKVLA--PQVDECEKTETYPAG--VFATLGEAGLLSLPYPV 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S   +    T    + W P++ S  
Sbjct: 61  EWGGGGQPYEVYLQVLEELAARWAAVAVAVSVHSLSCHPLLAFGTDEQRQRWLPEMLSG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       S      L+E + G+D AA+  +   +  G        W     ++D 
Sbjct: 120 ------------STIGAYSLSEPQAGSDAAALACKATAVEGGYRIDGTKAWITHGGVADF 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           + + A+     G   V   L D    GL + + + K+G  +  T    + N F      +
Sbjct: 168 YTLFART--GEGSRGVSCFLVDKDTEGLSFGKPEEKMGLTAVPTTSAHYDNAFLPAERRI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++V   + +L EA+ YA+ R   G  +ID   +   +
Sbjct: 226 GAEGQGLQIAFSALDSGRLGIAAVAVGLAQAALDEAVAYAQERTAFGRKIIDHQGLGFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + +A A     A   D     S +       A + K      A  V  +A++  
Sbjct: 286 ADMAAAVDSARATYLDAARRRDAGLPYSRQ-------ASVAKLVATDAAMKVTTDAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  +  + R  RE+    I  G+     L +   L
Sbjct: 339 GGYGYTRDFRVERFMREAKITQIFEGTNQIQRLVIARSL 377


>gi|319764991|ref|YP_004128928.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330827186|ref|YP_004390489.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119552|gb|ADV02041.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312558|gb|AEB86973.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 384

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 121/356 (33%), Gaps = 26/356 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R    GL        +                +  +A          +  ++  + +  
Sbjct: 42  QRMRELGLFGHSIPEEYGGAGLTTEELALVNIEVSQVATTFRARFGGNTGIASESLVVDG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP   + + P + S E             V     LTE   G+D  A+ +   +  D   
Sbjct: 102 TPEQKRRYLPLLASGE-------------VTGCFALTEPDAGSDATALRTTAVRDGDHYV 148

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 +  ++P+++ F + A+ + +  G   V   L +    GL       K+G   + 
Sbjct: 149 ITGSKCFITNAPIANLFTVFARTDPQSKGARGVTAFLVERGAPGLSTPPAYRKMGQHGSP 208

Query: 286 TVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
             E+            +      G    MK L    ++ A + V      + E +  A+ 
Sbjct: 209 VGEVVLDQVRVHESAIVGGVEGQGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRRAQT 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  ++++ IA+   ++ AA AL    A   D     + EA+         K
Sbjct: 269 RRQFGQPVGEFQLVQQMIAESNTEVHAARALVLETARKRDAGADVTMEASM-------CK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +  +M   V   A++  GGSGYI +    R YR+     +  G+    + ++   
Sbjct: 322 LFASEMCGRVADRAVQLFGGSGYIADNVAERFYRDVRLFRLYEGTSQIHLTNIAKR 377


>gi|296411298|ref|XP_002835370.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629149|emb|CAZ79527.1| unnamed protein product [Tuber melanosporum]
          Length = 685

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 117/539 (21%), Positives = 217/539 (40%), Gaps = 60/539 (11%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQ 71
           +PS       Q    +G N +  D  L  +++ +         HKEL+ L    LS    
Sbjct: 38  RPSSGDTGFFQDAPRLG-NQFEEDVGLKRVLSLYLPPALLKPLHKELDSLAVAALSPQVL 96

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
                A  + P L ++     R D +     W  L     H G+    ++  +  + +  
Sbjct: 97  HWVEDAEAHPPTLESHDAFANRSDTLRTSEGWRRLAELGAHQGIVAEGYEGRYGRIGQFA 156

Query: 132 AHKIR----------AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK-IFS 180
            + I            A     A+L + H+  P+ +  S  +L  +    ++   K    
Sbjct: 157 KYYIFSPSSALTTCPFAMTDGAARLLSQHIPHPATSIQSFFSLNCSLSSRREAEAKRQVF 216

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--------KISDGI-----YC 227
                   +  Q      G  +TE+ GG+D++   +           +I DG      + 
Sbjct: 217 YNAHFRLISRDQSARWTSGQWMTERSGGSDVSRSETVAVYSPLAPSSQIEDGTEELGPWV 276

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + G+K+F S+  +D  I+LA+  G  G    F  P  L +G  NG+   RLK K+G R+ 
Sbjct: 277 IDGYKFFSSATDADMTILLARTPGGGGKPSAFYAPMRLANGERNGVRIMRLKRKLGTRAL 336

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T ELE      +++G+       +  +  +  + +A+ ++S MR  LA A  +++ R V
Sbjct: 337 PTAELELKGMRAWMIGEEGEGIKQIATVLNITRVHNAVSAISFMRRGLAIAKAFSKVRVV 396

Query: 345 S-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------------ 391
           +    L   P+  R +A + L   A T L+F   +    +++ +  +             
Sbjct: 397 ARNRPLWTIPLHLRTLAHLELYQRATTHLAFFTIHLLSLSETSAAPSTPSPNASSPLHTP 456

Query: 392 -----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-ERS--IARHYRESPANSIL 443
                  R++ PI K    K+A + ++E  E +GG GY E E    IAR  R++   SI 
Sbjct: 457 STPHQLLRLLTPIAKALTAKLAMSTLSECAESLGGVGYCENEEPLNIARLLRDAQVLSIW 516

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQ------LFSTLEQDLGSSGKKVITILRDSISLCKE 496
            G+ N +V D+++ L++ +    +          +E++LGS      +++ +  +   E
Sbjct: 517 EGTTNVLVTDLISSLKRTSRAGGEEQGWVPFNEFVEENLGSPATATTSLVGEVEAEILE 575


>gi|89900744|ref|YP_523215.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345481|gb|ABD69684.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 596

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 102/485 (21%), Positives = 190/485 (39%), Gaps = 64/485 (13%)

Query: 63  EYVLSCTAQE-LARMANYNTPQLHAYGPGGER-----WDKVEF-HPAWHALLRRSIHDGL 115
           E     TAQ  L   A +N   L      G++      D V    P +    R+    G 
Sbjct: 30  EDAGFETAQAVLEEAAKFNEGVLAPLNWEGDKNPSSWKDGVVTATPGFKQAFRQFADGGW 89

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173
                   F      +   I AA   +         + P +T  ++ AL+T  +  +   
Sbjct: 90  QGLQHPVDFGGQGLPK--TIGAACGEMQNSANMSFALCPLLTDGAIEALLTAGSNELKAT 147

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +   + S ++  T             + LTE + G+D+AA+ S+ + ++DG Y + G K 
Sbjct: 148 YLENLVSGKWTGT-------------MNLTEPQAGSDLAAVRSRAEPLADGSYKVFGTKV 194

Query: 234 FLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKN 277
           F++    D       ++LA+V G       +  F+VP+ L +        N +    +++
Sbjct: 195 FITWGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNKDGSLGARNDVQCVSIEH 254

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T  L+F +     G+L+G  N     +  M         +  ++    S  +
Sbjct: 255 KMGIKASPTAVLQFGDHGGALGYLVGQENRGLEYMFIMMNAARFGVGVQGIAIAERSYQQ 314

Query: 335 AIHYARRRHVS---------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-- 383
           A+ +A+ R  S            +I  P +KR +  +        A++   A ++D A  
Sbjct: 315 AVTFAKDRVQSRPVDALAPANATIIYHPDVKRMLMTMRAYTEGCRAMATVAAAAYDAAHH 374

Query: 384 ----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               + R +  A+   M P+ K +  +M+  V +  ++  GG GYIEE   A++YR++  
Sbjct: 375 HADAEVRKQNQAFYEFMVPLIKGYSTEMSLEVTSLGVQVHGGMGYIEETGAAQYYRDAKI 434

Query: 440 NSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
            +I  G+       L        G    + L + +E   G   K       D++++ K  
Sbjct: 435 LTIYEGTTAIQANDLVGRKTARDGGQTAKALAAQIEATEGLLVKSGSA---DALAVAKRL 491

Query: 498 KGLAR 502
           K  AR
Sbjct: 492 KA-AR 495


>gi|302673154|ref|XP_003026264.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8]
 gi|300099945|gb|EFI91361.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8]
          Length = 418

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 147/405 (36%), Gaps = 43/405 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +L  + Q  A  A+   P++          +K    P+   ++      GL       
Sbjct: 47  EQMLKESVQRFA--ADVVGPKVREMD------EKEMMDPS---IISALFEQGLMGIETPA 95

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSR 181
            F          I A             +     T  + +     T    + W P +   
Sbjct: 96  DFGGAESSFTAAIIAIEELAKVDPSVSVMCDVHNTLVNTIFRKYGTKEQQEQWLPLLAE- 154

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        S      L+E   G+D  ++ ++ +K  D         W  +S  ++
Sbjct: 155 -------------SKLGSFCLSEPAAGSDAFSLQTRAKKEGDHYIINGSKMWITNSYEAE 201

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A  +   G   +          G+   + + K+G R+++T  L F +        
Sbjct: 202 VFLIFANTDPSKGYKGITCFAATKDM-GIQIAKKEEKLGIRASSTCTLNFDDLKVPA--- 257

Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355
            N+  G  +  KI I  L+   + ++   V LA+     A+ Y   R   G  +     M
Sbjct: 258 ANIIGGEGQGYKIAIEILNEGRIGIAAQMVGLAQGAFDKAVPYTFERKQFGKPVGTFQGM 317

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+ A++I AA  L++  A   D+    +++AA A+  + +        A  V   A
Sbjct: 318 QFQMAEAAVEIEAARLLTYNAARRKDQGLPFTKQAAMAKYHSSVV-------AQRVAGSA 370

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +E  GG G+  E  I +++R+S   +I  G+ N  +  +   ++K
Sbjct: 371 IEWAGGVGFTRETGIEKYWRDSKIGAIYEGTSNIQLQTIAKFIQK 415


>gi|328770929|gb|EGF80970.1| hypothetical protein BATDEDRAFT_11021 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 390

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 138/398 (34%), Gaps = 41/398 (10%)

Query: 70  AQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            Q+LAR    N   P+   +   GE       +P    +L+++   GL        +   
Sbjct: 18  LQDLARKFTQNEIIPKAAHHDQTGE-------YPT--EILKKAWDVGLLNLHVPTEYGGP 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                     +                +  + + V L       K +  +          
Sbjct: 69  GLGVLDCAVVSEELAFGCTGIQTAAEANGLAEAPVILAGNDFQKKKYLGR---------- 118

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
              M +  +     +TE   G+D+A   ++  K  D         W  +   ++ F +LA
Sbjct: 119 ---MAEEPLMCAYCVTEPGAGSDVAGAKTKAVKKGDKWVINGNKMWITNGGKANWFFVLA 175

Query: 248 QVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +            + D +  G+   + +  +G R++ T  + F +       D N   
Sbjct: 176 KTDESASAGRAFTGFIVDSNTPGITVGKKEMNMGQRASDTRGITFEDVEVP---DENRLG 232

Query: 307 GPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              +  KI +   D         +V   R +L EA  YA  R   G  + +   +   +A
Sbjct: 233 DVGQGFKIAMGAFDITRPLVAAAAVGLARRALDEATKYAIERTTMGKPIAEHQAIAFMLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+ + A+ +L ++ A   D     +  A+ A+  A        ++A    A+A++  G
Sbjct: 293 DMAIGVEASRSLVWKSAWMRDNGLKNTLYASMAKAHA-------SEVANKNAADAVQIFG 345

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G+  E  + +  R++    I  G+     L +   +
Sbjct: 346 GNGFNSEYPVEKLMRDAKIFMIYEGTSQIQRLIISRTI 383


>gi|318057637|ref|ZP_07976360.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318081101|ref|ZP_07988433.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 390

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 138/376 (36%), Gaps = 35/376 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D  E H   + ++R     GL    +   +  +         A           A  L +
Sbjct: 32  DYYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGLALEELARVDSSVAITLEA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  + L  T    ++W P++ + E             +    GLTE   G+D   
Sbjct: 92  GVSLGAMPIHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGG 138

Query: 214 ITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPN 268
             +          + ++G K F+++  +D    + +  V GR   G   +  ++      
Sbjct: 139 TRTTAVLDEATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISAIIVPSGTP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSG 327
           G       +K+G  ++ T EL F +        L  +  G  + ++I   LD   ++++ 
Sbjct: 199 GFTVAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGYAQFLRI---LDEGRVAIAA 255

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA     E++ YA+ RH  G  +     ++  IAD+ L    A       A+    
Sbjct: 256 LATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMELRAHTARLSWRDAASRLVR 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +EAA A       K +   +A     +A +  GG G++ E  +AR +R++    I
Sbjct: 316 GEAFKKEAALA-------KLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRDAKILEI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 369 GEGTSEVQRMLIAREL 384


>gi|109898458|ref|YP_661713.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109700739|gb|ABG40659.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 616

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 87/482 (18%), Positives = 173/482 (35%), Gaps = 60/482 (12%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P            +KV   P            GL    +D     +   +   
Sbjct: 73  RKADLNEPTFDG--------EKVHMIPEVKEAFDTYAESGLIAGRFDFDDGGMQLPETIM 124

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +  +  +  +   +      +V +A+++       +   + P++ + E+  T        
Sbjct: 125 MACSSYFTASNPSSTSYSFLTVAAANVIKNFAEQSIKDKFMPRMLTGEFTGT-------- 176

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ +A IT+  +   DG Y + G K F+S+   +       ++LA++
Sbjct: 177 -----MALTEPHAGSSLADITTNAKPADDGTYRIKGSKMFISAGDHELSDNIVHLVLAKI 231

Query: 250 EG------RVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTF 295
           +G       +  F+VP+       E    N +    L +K+G R   +  L F    +  
Sbjct: 232 QGAPAGVKGISLFVVPKFRLDENGEPAQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCH 291

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------- 346
           G+L+G+ +     +  M     +     +          ++ YA+ R             
Sbjct: 292 GYLVGEAHQGLKYMFLMMNEARIGVGFGAAMLGYSGYRYSLGYAKERTQGRVAPNNKPTD 351

Query: 347 --GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I    +KR +      +  A +L F  +   DE       +++   A    ++ P
Sbjct: 352 KPATIIKHGDVKRMLLAQKSYVEGAMSLCFYASRLVDELHIAETPEAKQRTAELLDLLTP 411

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456
           + K W  +  P     A++ +GGSGY  E  + + +R++  N I  G+     LD++   
Sbjct: 412 VVKAWPSEFGPKANDLAIQILGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLMTRK 471

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL-RDSISLCKEDKGLARFLTEKIALASSAA 515
           L +       QL   + +D   +   V   L  D        + L   +  ++A  +  A
Sbjct: 472 LWQADGAGLVQLQKVMGEDFAKAQHPVSKQLIADLQPYLLRLQKLIPVIGAELAGENQNA 531

Query: 516 AL 517
            L
Sbjct: 532 LL 533


>gi|156541938|ref|XP_001601226.1| PREDICTED: similar to acyl-coa dehydrogenase [Nasonia vitripennis]
          Length = 924

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/471 (17%), Positives = 176/471 (37%), Gaps = 54/471 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
              ++     G       +    +        R   +     L     L +        +
Sbjct: 402 KETMKALWDLGAFGIQVPQELGGLGLNNTQYARLVEVVGYNDLGVGITLGAHQSIGFKGI 461

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L+ TP     + P++ + +                   LTE   G+D  A+ S+  K  
Sbjct: 462 LLVGTPEQKAKYLPRVCNGDM--------------AAFCLTEPSCGSDAGAVRSKAVKSP 507

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRL 275
           DG  Y L+G K ++S+   ++   + AQV  +          V   + + +  G+     
Sbjct: 508 DGSHYILNGSKIWISNGGLAEIMTVFAQVPMKDPITGETKDKVTAFIVERAFGGVTNGPP 567

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MR 329
           +NK+G + + T E+ F +         NV  G  +  K+ +  L++    ++      M+
Sbjct: 568 ENKMGIKCSNTTEVYFEDVKIPA---ENVLGGEGQGFKVAMQILNNGRFGMAAALSGTMQ 624

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSE 388
               +AI +A +R      +     ++  +A +++      ++++ ++ + D+  +    
Sbjct: 625 YCTKKAIEHAVQRIQFSRTIDSYGTIQEKLARMSMLQYITQSMAYMVSGNMDKGSQDYHL 684

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA       I+K +  + A  V  EA++ +GG G+++   + R  R+     I  G+ +
Sbjct: 685 EAA-------ISKVFASESAWWVCDEAIQVLGGMGFMKSTGLERVLRDLRIFRIFEGTND 737

Query: 449 AMVLDV-LNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKED--KGLAR 502
            + L V L  ++   +  ++L   F     +LG   ++V       I L   +    +  
Sbjct: 738 ILRLFVALTGIQYAGSHLKELQNAFRNPAANLGLIAEEVSKRATRVIGLNSLNLTPLVHP 797

Query: 503 FLTEKIALASSAAA---------LYRAGMNDIADVFLENRFLDNCHSTHCM 544
            LT+  AL S +           L + G   + + F+ NR       T+ M
Sbjct: 798 SLTDSAALCSKSIESFGSTIENVLVKYGKGIVEEQFILNRLAQAAIDTYTM 848


>gi|149048724|gb|EDM01265.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e
           [Rattus norvegicus]
          Length = 496

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 157/446 (35%), Gaps = 66/446 (14%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R   +  M       L +        + L+        + PK+ S E+           
Sbjct: 3   ARLGEIISMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH----------- 51

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV--- 249
                  LTE   G+D A+I ++     D  Y  L+G K W  +  +++ F + A+    
Sbjct: 52  --IAAFCLTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVV 109

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
             +G +   +    + +    G+   + ++K+G R + T E+ F NT   +   L  V  
Sbjct: 110 DSDGSIKDKM-TAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGG 168

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G    M I   L+S   S+           + +   YA  R      L +  +++   A 
Sbjct: 169 GFKVAMNI---LNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFAL 225

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A       ++++  +   D+            I A + K +  + A   ++EA++ +GG
Sbjct: 226 MAQKAYVMESMAYLTSGMLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGG 280

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS 479
           SGY+++    R  R++    I  G+   + L +    L   G  L  ++      ++ + 
Sbjct: 281 SGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELKSGNVTTV 340

Query: 480 GKKVITILRDSISL---------------------CKEDKGLARFLTEKIALASSAAALY 518
            + +   LRDS+                        +E+        E +        L 
Sbjct: 341 METIGRKLRDSLGRTVDLGLSSNIAVVHPSLGHYKLEENVHYFGRTVETL--------LL 392

Query: 519 RAGMNDIADVFLENRFLDNCHSTHCM 544
           R G   + +  +  R  +   + + M
Sbjct: 393 RFGKTIVEEQLVLKRVANILINLYGM 418


>gi|15899587|ref|NP_344192.1| Acyl-CoA dehydrogenase (acd-6) [Sulfolobus solfataricus P2]
 gi|284174006|ref|ZP_06387975.1| Acyl-CoA dehydrogenase (acd-6) [Sulfolobus solfataricus 98/2]
 gi|13816236|gb|AAK42982.1| Acyl-CoA dehydrogenase (acd-6) [Sulfolobus solfataricus P2]
 gi|261601344|gb|ACX90947.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus
           98/2]
          Length = 400

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRISVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A I +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPVAGSDVAGIQTVAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  AN FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAANLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|86140292|ref|ZP_01058851.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis
           MED217]
 gi|85832234|gb|EAQ50683.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis
           MED217]
          Length = 389

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 146/359 (40%), Gaps = 28/359 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVA 163
           + ++    G     +   +  +     + +              A  + + +  + + + 
Sbjct: 42  IWKKMGDMGYFGLAYPEEYGGLDLDIFYTLIFLEELQRINSGGFAAAMWAHAYLAMTHLK 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 + + +              AP         L +TE  GG+D+A + S   +  D
Sbjct: 102 AEGDAAIKEKYL-------------APSISGDKIGCLCITEPFGGSDVAGMRSTAVRQGD 148

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++ + SD  I+ A+     G   +   + D    G+   +L +K+G R
Sbjct: 149 H-YVLNGSKTFITNGVFSDYLIVAAKTSPEKGNKGLSIFVVDREAEGVSATKL-DKLGWR 206

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+ F++       L+G+ +     +     L  L   + + +    +L  A+ Y 
Sbjct: 207 ASDTGEIAFTDVKVPAANLMGEEDKGFSYIMQHFALERLIMGVNAHARAEYALEYALEYM 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  +A++A +I    A ++ +A + D+     +EA+ +++M   
Sbjct: 267 GEREAFGKTINKFQALRHTVAEMASEIEMVKAFNYSIAYNLDKGDYVVKEASMSKLM--- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 K+A  VI + ++ +GG GY+E+  +AR +R+S    I  G+   +   +  ++
Sbjct: 324 ----GTKIADEVIYKCLQMLGGYGYMEDYPLARMFRDSRLGPIGGGTSEILKEIIAKMV 378


>gi|328886350|emb|CCA59589.1| Methylsuccinyl-CoA dehydrogenase, predicted by [Streptomyces
           venezuelae ATCC 10712]
          Length = 401

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 126/379 (33%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++ + E                   ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDYFLPRMAAGE-------------TRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVKDGDEYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGVTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKAIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|297203508|ref|ZP_06920905.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197714483|gb|EDY58517.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 401

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDVRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  +  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVRDGDEYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTFLIEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRLPANRVLGGATGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVRYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|187477865|ref|YP_785889.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115422451|emb|CAJ48976.1| probable acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 606

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 92/514 (17%), Positives = 177/514 (34%), Gaps = 80/514 (15%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           +   P L            V   P +          G         +      Q     A
Sbjct: 60  DRQPPVLKE--------GVVTTTPGYARAFAEYSTGGWQGLQHPVQWGGQGLPQLVAAPA 111

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +  +  A L        +      + ++ +P   K + P++    +  T           
Sbjct: 112 SENFQAASLAFSLCPMLTDGVIEALLMVGSPAQQKAYVPQLIGGRWTGT----------- 160

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
             + LTE + G+D+A + ++     DG Y L+G K F++    D       ++LA++   
Sbjct: 161 --MNLTEPQAGSDLALLATRAVPQPDGSYRLTGQKIFITYGEHDLAENIIHLVLARLPDA 218

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF--------SN 293
                 +  F+VP++L +     G  N +    L++K+G   + T  + +          
Sbjct: 219 PAGVKGISLFIVPKVLVNEDGSLGRRNDVWCASLEHKLGIHGSPTAVMLYGAGKGEVGEG 278

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348
             G+L+G  N     +  M            ++    +  +A  YAR R     I     
Sbjct: 279 AVGYLIGQANRGLEYMFIMMNAARFSVGQQGIALSERAYQKAQAYARERIQGRAIEGLAG 338

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPI 399
              +   P ++R +  +     AA A+S+  A + D+ K   +        A+   + PI
Sbjct: 339 PVSISHHPDVQRMLLTMRALTEAARAVSYVAAAAHDKGKHHPDAEVRARNQAFYEYLVPI 398

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-- 457
            K +  + A  V +  ++  GG G+IEE   A+HYR++    I  G+      D +    
Sbjct: 399 VKGFSTESAVEVASLGVQVHGGVGFIEETGAAQHYRDARILPIYEGTTAIQANDFVGRKT 458

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR---FLTEKI-ALASS 513
           L  G  +             ++ +  +  L    +     +GL R      E I A   +
Sbjct: 459 LRDGGAVAHACI--------AAMRDTLRALEAEQADEASGEGLQRLREHFAEAIDAYEEA 510

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              + +   +++  VF  +         + ML G
Sbjct: 511 VVFVLQHAASEVRAVFFGS-------VPYLMLAG 537


>gi|118464978|ref|YP_881894.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166265|gb|ABK67162.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 387

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 133/378 (35%), Gaps = 30/378 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  ERW     H        ++   GL        +       A  +        A  +
Sbjct: 33  TPNQERW--AAQHAVDREFWNKAGDAGLLGLDLPEEYGGAGGDFAMNVVVQEELAYAYDQ 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  S   A  +    +    + W PKI S E               + + +TE   
Sbjct: 91  GFGFAVHSPIVAHYIWAYGSDEQRRRWLPKIISGE-------------AVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+ ++ +  ++  D  Y ++G K F+S+    D  +++A+ +   G   V  ++ +  
Sbjct: 138 GSDLQSVKTTARRDGD-FYVINGSKTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETD 196

Query: 267 PN--GLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDS 320
            N  G    R+  K+G  +  T EL FS+        L     +    + +      L  
Sbjct: 197 ENLAGFERGRVLAKMGQHAQDTRELFFSDMRVPVANLLGAQEGLGFYQLMEQLARERLII 256

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +  +   V++ EAI Y+R R   G  +      K  +A+   +  A   +       +
Sbjct: 257 ATICAALAEVAVLEAIKYSREREAFGRPIGKFQHTKFVLAECKTEALAIKTMVDYAVGQY 316

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K+    A+ A       K +  + +  ++ + ++  GG GY+ E  IA  Y  S  N
Sbjct: 317 LDGKNDPATASMA-------KLFAAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVN 369

Query: 441 SILLGSGNAMVLDVLNLL 458
                +   M   +   L
Sbjct: 370 RKYGRTSEIMKEIISRSL 387


>gi|159184750|ref|NP_354421.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|159140038|gb|AAK87206.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 520

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 86/464 (18%), Positives = 165/464 (35%), Gaps = 43/464 (9%)

Query: 68  CTAQELARMANYNTPQLHA-YGPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
               E AR A      L+      G      +V     +    RR   DG         F
Sbjct: 27  AILNEAARFAETVLEPLNTPADREGCTVVDGRVRVPTGFADAFRRHAGDGWLAMDVPERF 86

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                    +   A L+    +        +  +  ++A      V  +W P++ + E+ 
Sbjct: 87  GGQALPLVLQAACAPLFERGCVALMMASGSTRAACHLLAETAEGAVADEWVPRLAAGEW- 145

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
                       A  + ++E   G+D+A + S+     +G + + G K ++S    D   
Sbjct: 146 ------------AATICISEPDAGSDLARLRSRAV-FREGAWRIEGRKIWISFGDHDMAM 192

Query: 243 ---FIMLAQVEGRVGCFLVPRLLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
                +LA+     G   +   L     DG  NG+  +R++ K+G   + T  L F    
Sbjct: 193 RIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHGSPTCALRFDGAR 252

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------L 349
           G LLG+       +  M  L+ L +    +     ++  A  YA+ R   G        +
Sbjct: 253 GLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAI 312

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYW 403
              P ++R + +  L      A +  LA   D A+   +E       A +R + P+ K +
Sbjct: 313 AHHPDIRRQLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNF 372

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG 461
                  V  +A++ +GG+GY  E  + ++ R++   +I  G+     +D+L   L  +G
Sbjct: 373 GADAGFTVSNQAIQILGGAGYTREWPLEQYLRDARVMTIYEGTTGMQAIDLLTRRLWREG 432

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
               +        +L           + + S+    +  +R + 
Sbjct: 433 GKGLDVFLKRARSELADYRS---DKTKAAASVLDAFEAESRRMA 473


>gi|313236473|emb|CBY11788.1| unnamed protein product [Oikopleura dioica]
          Length = 414

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 128/377 (33%), Gaps = 33/377 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSI-WDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           + WD+V   P    +  R+   GL      D     +       +            +  
Sbjct: 60  QDWDEVGHVP--REIWLRAGEMGLLGVNCMDEDLGGICGDFKSSMVVMEEQCYIANSSIG 117

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               S      V+   T    + + PK+ S E                 + +TE   G+D
Sbjct: 118 WGLHSDIVIPYVSQYGTQDQREKFIPKMISGEC-------------ITAIAMTEPGAGSD 164

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLVPRLLEDGSP 267
           +  + +  ++  D  + ++G K F+++   +D  I+ A  +         +   L +   
Sbjct: 165 LQGMKTFAKRDGDD-WIINGSKVFITNGWHADMVIVCAITDPTAKSAAKGISLFLIEDGM 223

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G    R  NKIG +   T EL F +        L    G      +L+       L   
Sbjct: 224 PGFNKGRKLNKIGLKGQDTAELFFDDLRVPTSAILGGEKGLNRGFGMLMHELPRERLLIT 283

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             + + M  +      Y + R   G  L     ++  +A I  DIA A   +       D
Sbjct: 284 AQACATMEYAFECTREYVKERKAFGKTLSKLQTIQHDLAAIKTDIAVARNFT-------D 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            +    E+       A + KYW  +     +++ ++  GG GY+ E  IAR + +S   S
Sbjct: 337 TSIQMYEDGILDYNTASMGKYWVTEKNNENVSKMLQMFGGWGYMWEYPIARMFADSRVYS 396

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M   V   +
Sbjct: 397 IYGGSNEIMKELVARSI 413


>gi|148667825|gb|EDL00242.1| mCG121561 [Mus musculus]
          Length = 430

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           +                +          S      +A
Sbjct: 87  REVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIA 146

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + +                 + +TE   G+D+  + +  ++   
Sbjct: 147 NYGTKEQIEKFIPQMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKRSGS 193

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++   SD  I++A    E R     +   L +    G    R  +K+G
Sbjct: 194 D-WILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMG 252

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 253 MKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRN 312

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 313 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHETKRLDSGSA 365

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  E ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 366 SMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQ 425

Query: 458 L 458
           +
Sbjct: 426 I 426


>gi|299536969|ref|ZP_07050274.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
 gi|298727549|gb|EFI68119.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1]
          Length = 382

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 128/376 (34%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+K    P   +  R+    G  C   +  +  +    +  +             
Sbjct: 28  PHYAQWEKDHLIPL--SFWRKLGDMGYLCPQVEEQYGGLGLDFSFGVIIQEELERIGSSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +      +    T      W PK  + +Y                + +TE   G
Sbjct: 86  IGVGLHNDIVVPYIEAYGTHEQKSRWLPKCVTGDY-------------ITAIAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEG--RVGCFLVPRLLEDG 265
           +D+A I +   +  D  Y ++G K F+++ +     ++A +           +  L+ + 
Sbjct: 133 SDLANIKTSAIRDGDH-YIVNGQKTFITNGIHTNLAVVAVKTNPQAEKKHRGISLLVIEE 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R   K+G  +  T EL F +       LLG+       + +      L  AI
Sbjct: 192 GTPGFTKGRQLEKVGMHAQDTAELYFEDCRVPVQNLLGEEGKGFHYMMEKLQQERLAVAI 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +     L   + Y + R   G  + D    +  IA++A  I    +    L      
Sbjct: 252 AAQTAAEDMLTLTLDYVKSRQAFGKTIGDFQNTQFKIAEMATKIELGKSFLESLIEEHIA 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                           + KYW  + A  +  + M+  GG GY+EE  IAR YR+ P  SI
Sbjct: 312 GND-------VVTKVSMAKYWITENARDLATQCMQLHGGYGYMEEYKIARRYRDIPVMSI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + +   L
Sbjct: 365 YAGTNEVMKVIIAKNL 380


>gi|31982520|ref|NP_031407.2| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Mus musculus]
 gi|12836858|dbj|BAB23838.1| unnamed protein product [Mus musculus]
          Length = 430

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           +                +          S      +A
Sbjct: 87  REVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIA 146

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + +                 + +TE   G+D+  + +  ++   
Sbjct: 147 NYGTKEQIEKFIPQMTAGKC-------------IGAIAMTEPGAGSDLQGVRTNAKRSGS 193

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++   SD  I++A    E R     +   L +    G    R  +K+G
Sbjct: 194 D-WILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMG 252

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG+ N     +        L  A +++S       E  +
Sbjct: 253 MKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRN 312

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y ++R   G  +     ++  +A++   I    A         D      E        A
Sbjct: 313 YVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFV-------DSCLQLHETKRLDSGSA 365

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + KYW  ++  +V  E ++  GG GY+ E  IA+ Y ++    I  G+   M   +   
Sbjct: 366 SMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQ 425

Query: 458 L 458
           +
Sbjct: 426 I 426


>gi|23100122|ref|NP_693588.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22778354|dbj|BAC14623.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 388

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 138/381 (36%), Gaps = 38/381 (9%)

Query: 96  KVEFHPAWHALLRRSI--HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           K E  P +     + +      +         P V ++   + A+ LY    +E+     
Sbjct: 25  KQEVTPYYTNWEEQGMVPRQFWNKLGEQGFLLPEVPEEYGGLGASFLYSTTIIESFCRQG 84

Query: 154 PSVTSASMVAL----------MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            S  +A++               T    K + P++ S E             +   + +T
Sbjct: 85  YSSIAANLSVHDTILANYFLQYGTEEQKKYYLPRMISGE-------------LVGAIAMT 131

Query: 204 EKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE-GRVGCFLVPR 260
           E   G+D+  I +          Y L+G K F+++     F I++A+ +        +  
Sbjct: 132 EPGAGSDLQRIKTTANFDEGLNGYVLNGSKTFITNGQHCDFAIVVAKTKVDVKPSKGISL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            + D   NG    +   KIG  +  T EL F +       +LG +N     + +      
Sbjct: 192 FIVDAKKNGFTKGKNLEKIGLHACDTSELYFEDILLDESDILGGVNQGFSVLMNELPRER 251

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A  +V+ M   L + + Y + R + G  L      +  +A++   +    + +    
Sbjct: 252 LIVANCAVASMEGVLTDTVSYVKERELFGTTLDQFQHTQFTLAELQTKVRVQRSFA---- 307

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              DE  +R  E       A + K  C ++   VI   ++  GG GY+ E  IAR Y ++
Sbjct: 308 ---DECTTRCIEGNLDTATASMAKLSCTEVQGEVIDRCLQLFGGYGYMLEYPIARAYADA 364

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   M L +   L
Sbjct: 365 RVQRIYGGTSEVMKLIISREL 385


>gi|197120808|ref|YP_002132759.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196170657|gb|ACG71630.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 591

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 89/511 (17%), Positives = 182/511 (35%), Gaps = 48/511 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL-----------LRRSI 111
           EY++S   ++        T +        E++ + E  PA HAL           +R++ 
Sbjct: 9   EYLISEATKDDVFTPEDFTEEQRQIADTAEQFAETEALPAEHALEQHEPGVAAALMRKAG 68

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL       ++  +   +A  + AA    M    +    + +      +    T    
Sbjct: 69  DAGLLMIDAPEAYGGLALDKATSMLAAERMGMGGAFSVSYAAHTGIGTLPLVYYGTDAQK 128

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
             +  K+ + E+             A    LTE   G+D     +      DG  Y L G
Sbjct: 129 DRYLTKLVTGEW-------------AAAYCLTEPEAGSDAMGGKAIATLSPDGKHYLLDG 175

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++   ++ F + A+V+           L + +  G+     + K+G + ++T  +
Sbjct: 176 TKQFITNGSFANLFTVFAKVD----RKHFTAFLVERTFPGVTVGPEEKKLGIKGSSTTSV 231

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +    +   LG++        ++  +             +++LA    YA  R   G
Sbjct: 232 IFESAKVPVENVLGEIGKGHKIAFNVLNVGRFKLGAAVTGAAKLALATGAAYANARKQFG 291

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSEEAAYAR 394
             +     ++  +AD A  + A+ +L +RLA   D+             ++  +      
Sbjct: 292 TPIARFGAIREKLADQAAGVYASESLIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYA 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I   I K +C ++   V+ E ++  GG G+I+E    ++YR+   N I  G+     L V
Sbjct: 352 IECAIAKVFCSEVLADVVDEVVQIHGGYGFIQEYPAEKYYRDERINRIFEGTNEINRLLV 411

Query: 455 LN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
              +L +       L   + + + +     +  +  ++    E   +A      + +A +
Sbjct: 412 PGTILRRALKGELPLQREVMKAMDALMNPSLDEVDPAVPFAAEKATVANLKRAFLVVAGA 471

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           A   Y   + D  +V L     D        
Sbjct: 472 AVQKYGEALKDEQEVLLA--LADVAIQAFAA 500


>gi|299066892|emb|CBJ38087.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum
           CMR15]
          Length = 594

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 195/506 (38%), Gaps = 65/506 (12%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAW 103
           +A  P       E           +E AR        L+A       RW    V     +
Sbjct: 23  VARLPG-----FEEATADTAQAVLEESARFTGEVVAPLNAEGDRNPSRWKDGAVTASAGF 77

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G         +      +   I  A + ++        + P +T  ++ A
Sbjct: 78  KEAFQQFGQGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEA 135

Query: 164 LMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L+T  +    + + PK+ S E+  T             + LTE + G+D+A + ++ + +
Sbjct: 136 LLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPV 182

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----G 265
            DG + + G K F++    D       ++LA+  G       +  F+VP+ L +     G
Sbjct: 183 GDGTFKVFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVVPKFLVNADGSLG 242

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
           + N +    +++K+G +++ T  L+F +     G L+G+ N     +  M         +
Sbjct: 243 ARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGM 302

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALS 373
             +     +  +A+ YAR R  S            +I  P +KR +  +      A AL+
Sbjct: 303 QGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALA 362

Query: 374 FRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A + D     +++A      A    + P+ K W  +M+  V +  ++  GG G+IEE
Sbjct: 363 YVAAAACDAGHHAADDATRKQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEE 422

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQ---DLGSSGKK 482
              A++YR++    I  G+      D++    +  G  +   + + + +    L + G  
Sbjct: 423 TGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGAVALGICAEIARVEAQLAAKGGA 482

Query: 483 VITILRDSISLCKED-KGLARFLTEK 507
               +R  +   +E  + + RF+  +
Sbjct: 483 HCEAMRQRLGAGREALESVVRFVVAQ 508


>gi|291239179|ref|XP_002739510.1| PREDICTED: Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Saccoglossus kowalevskii]
          Length = 428

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 136/409 (33%), Gaps = 43/409 (10%)

Query: 69  TAQELAR-MA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             Q+LAR  A     P+   Y   GE        P    +L+++   GL   +  + +  
Sbjct: 51  EYQQLARKFAREEMIPKAAEYDRTGE-------FPV--DILKKAWEIGLMNVLIPQRYGG 101

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                      A             M  +    + + +       K +  ++        
Sbjct: 102 PELSILDASVIAEELAYGCSAMQVAMESNNLGQAPLIIAGNHEQKKKYLGRMV------- 154

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 +  +      TE  GG+D+A + +  +   D         W  +   ++ + +L
Sbjct: 155 ------EEPLMCAYAATEPGGGSDVARMCTFAENKGDHYVINGQKMWITNGGKANWYFVL 208

Query: 247 AQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           A+ +    R         + D    G+   R +  +G R + T  + F +    ++   N
Sbjct: 209 ARTDPDLKRPASGAFTGFIVDRDTPGVTPGRKELNMGQRCSDTRGITFEDV---VVPKEN 265

Query: 304 VSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           V  G  +  KI +          A   V   + +  EA  YA  R   G ++     +  
Sbjct: 266 VLLGEGDGFKIAMAAFDRTRPPIAAGHVGLAQRAFDEATKYALERKTMGKVIAQHQAVAF 325

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A+ I  +    ++    +D+    +         A I K W   +A     +A++
Sbjct: 326 MLAEMAIGIETSRLAIYKCCWEYDQGHKNT-------YSASIAKAWAADVANKCATDAVQ 378

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             GG GY  E S+ +  R++ A  I  G+     + +         L E
Sbjct: 379 IFGGYGYNSEYSVEKLMRDAKAFQIYGGTTQIQRMIIARQWINKVKLGE 427


>gi|195998429|ref|XP_002109083.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190589859|gb|EDV29881.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 392

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 108/285 (37%), Gaps = 16/285 (5%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E           TS      L+E+  G+D  A+ ++  +  +         W  ++ ++
Sbjct: 114 NEEQKKKYLTKLSTSTVGCFCLSEQGSGSDAFAMQTRAVRDGNDYVINGTKLWITNADIA 173

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
               ++A      G   +   + D S  G+   + + K+G  + A   + F +       
Sbjct: 174 GLMFVMANAAPDQGYKGITCFIVDASTPGVTVSQREKKLGQHAAANCPVIFEDVRVPAS- 232

Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
             NV  G     KI    L+   + +    +  ++      + Y   R   G  L D   
Sbjct: 233 --NVIGGIGLGYKIAASMLNEGRIGIGAQMLGASQGVMDYVVPYTMERKQFGKRLFDFQA 290

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           M+  IA+    I AA  L +  A   D  K  ++EAA       I KY+  ++A  V   
Sbjct: 291 MQHQIAEACTKIEAARLLVYNAARLKDSNKPYAKEAA-------IAKYYSTELAVQVGLS 343

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            ++ +G  GY+++  + +  R+S    I  G+ N M+  +   ++
Sbjct: 344 GIKWLGALGYMKDAPVEKLLRDSIPGVIYEGTSNIMLNTIAKFVQ 388


>gi|196016826|ref|XP_002118263.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens]
 gi|190579164|gb|EDV19266.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens]
          Length = 374

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 115/307 (37%), Gaps = 28/307 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A +V    +    K +  K                 S+     L+E+  G+D  A+ +  
Sbjct: 88  AGVVLDYGSEEQKKKYLSKF--------------ANSMFGSFCLSEEGSGSDAFAMKTTA 133

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D         W  S+ M+ AF+++A      G   +   + D    G+   R + K
Sbjct: 134 LRSGDHYIINGNKLWITSAHMAGAFLVMANAAPEEGYKGITCFIVDADTPGVSVPRREEK 193

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA--- 335
           +G  + +   + F N        +       +   I   L+   + V+   V  A+    
Sbjct: 194 LGQHAVSNCPVTFENVKVPASNIVGEIGSGYK--IIASTLNEGRIGVAAQMVGAAQGILD 251

Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             I Y   R   G  L D   M+  IA+  + + AA  L++  A   +      +EAA A
Sbjct: 252 HVIPYTMERKQFGKRLFDFQAMQHQIAEATVQVEAARLLAYNAARLHECNMPYVKEAAMA 311

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  KY+  +MA  +  + ++ +G  GY+++  I +  R+    +I  G+ N M+  
Sbjct: 312 -------KYYSTEMACQIGLKGIKWMGALGYMKDFPIEKFLRDIIPGTIYEGASNVMLNT 364

Query: 454 VLNLLEK 460
           +   + K
Sbjct: 365 IAGRVAK 371


>gi|301778139|ref|XP_002924497.1| PREDICTED: LOW QUALITY PROTEIN: very long-chain specific acyl-CoA
           dehydrogenase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 727

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 32/331 (9%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 242 ILLFGTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRTSAVPS 288

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + +    G+ +  
Sbjct: 289 PCGKYYTLNGSKIWISNGGLADVFTVFAKTPITDAATGAAKEKITAFVVERGFGGVTHGP 348

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            + K+G +++ T E+ F          L  V  G    M IL       A      MR  
Sbjct: 349 PEKKMGIKASNTAEVYFDGVRVPSENVLGEVGGGFKVAMHILNNGRFGMAAALAGTMRGI 408

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+       A 
Sbjct: 409 IAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQG------AT 462

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + 
Sbjct: 463 DFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILR 522

Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDLGSSG 480
           L V     ++KG  L   L + L+   G++G
Sbjct: 523 LFVALQGCMDKGKELSG-LGNALKNPFGNAG 552


>gi|209515548|ref|ZP_03264413.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504015|gb|EEA04006.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 387

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 131/372 (35%), Gaps = 25/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+   +P  H +       GL    +  ++            A   +       
Sbjct: 26  PRADEIDRTAEYP--HDMYALLKELGLFTLPFPEAYGG-AGSLMSACIAVEEFGRVCYNT 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G+L+    T    +    T        P + S               +   L +TE + G
Sbjct: 83  GYLLVVQWTPFGAILEGGTEEQKARLLPGLASG-------------DLRGALSITEAQSG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP 267
           +D++ I +  ++ + G        W  +S ++D  ++ A+     G    V   + D + 
Sbjct: 130 SDVSGIRTTARRKNGGYVLNGSKIWCTNSHIADFILVAAKTLDEEGQPLGVNLFIVDRNT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE----DMKILIYLDSAIM 323
            GL     ++K+G R  A+  L F + F      L    G       +         A  
Sbjct: 190 PGLTIGNEEDKMGARGVASCPLYFDDAFIRTEDRLGPEGGQGFKVAMEALNTSRPIVAAR 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + ++   + + + R   G  + +   ++  IAD+     AA  L +R A+  D  
Sbjct: 250 AVGIAQGAIDHTVKFIQDRVAFGQTISNFQGVRWMIADMVTQTEAARQLVYRTASLVDAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E A     +A + K +   +A  V  +A++  G +G   E  I R++R++    I+
Sbjct: 310 VRGRELA----PIAAMAKMFASDVAMKVATDAVQLFGAAGISNEYPINRYFRDAKVVQII 365

Query: 444 LGSGNAMVLDVL 455
            G+       V 
Sbjct: 366 EGTNQIQRNIVA 377


>gi|50545948|ref|XP_500511.1| YALI0B04906p [Yarrowia lipolytica]
 gi|49646377|emb|CAG82739.1| YALI0B04906p [Yarrowia lipolytica]
          Length = 577

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 124/554 (22%), Positives = 211/554 (38%), Gaps = 68/554 (12%)

Query: 18  PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQE 72
            + + F  ++P L    N Y  +S L  +   +      + V  EL  LG+YV+S    E
Sbjct: 3   TATTGFFQDRPTLL---NQYDGNSALKKVAEFYLSHKTLAAVLPELRELGDYVISKEIFE 59

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
               A  N P++   G  G   +++     W  L  ++   G+    ++R +    R   
Sbjct: 60  WQEDAETNIPRVEHQGTFGHPKNRLIVSQGWKLLKAKAFAAGIISDSYERKYAEESR--- 116

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             +   + +L +   A  L   ++T  +   L     V      ++  +E+     +   
Sbjct: 117 -VVAFLKNWLFSASSATVLCPFAMTDGTARVL----EVFAKDDERL--QEWYNHLVSSDP 169

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQK-------------------------------- 220
             +   G  +TE+ GG+D+    +                                    
Sbjct: 170 TQAWTSGQWMTERPGGSDVRNTETVATSSYRKEEGAESRPNASANNQIENNATSDIVTVG 229

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                Y ++G KWF S+  S+  I+LA+ EG  G       +   +P  +   RLK K G
Sbjct: 230 TGPKDYTVNGFKWFSSATDSECSILLAKREGETGL---SCFIGKLTPETVIINRLKKKFG 286

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             +  T ELE  N    LLG  N     +  +  +  L S+  ++S    SL  A  YA 
Sbjct: 287 TIALPTAELELRNHPVILLGQANNGVPVIATVLNITRLYSSTSALSCYGRSLHIAKQYAL 346

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMA 397
            R V G  L   P   + +A   + +     L F   +   +++         A  R++ 
Sbjct: 347 VRSVFGKKLSATPAHLKTLAHEQVQLTGLMFLLFEGISLLGQSEVTGLSPHREAVLRVLP 406

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDV 454
            I K +CCK A    +E ME +GG+GY+E   + +IAR YRES  N I  G+ N +  DV
Sbjct: 407 GIAKAYCCKKATIGCSECMEALGGAGYLEHEIDINIARLYRESQVNVIWEGTTNVLSDDV 466

Query: 455 LNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-----LCKEDKGLARFLTEK 507
             ++  ++G  +       + +   SS + V+               +  +  AR +T K
Sbjct: 467 ARVMKGKRGPLMIGAFEKYIAEV--SSDQSVLDEFAAWKKWVEGMDLEATRADARNVTYK 524

Query: 508 IALASSAAALYRAG 521
           +A     A L R  
Sbjct: 525 LAHVIVRALLLRNA 538


>gi|320451517|ref|YP_004203613.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320151686|gb|ADW23064.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 390

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 153/379 (40%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLE 147
           PG    D+    P    L+R+    G+  +    ++           R            
Sbjct: 31  PGAAERDRTGAFP--FELVRKLAQFGVFGATVPEAYGGAGLTSRLFARMVEEIAYYDGAL 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +  +   + L    R  + + PK+ S E                  GLTE   
Sbjct: 89  ALTVASHNSLATGHILLAGNERQKETFLPKLASGE-------------ALGAWGLTEPGS 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG----CFLVPRLL 262
           G+D AA+ ++ + +S G Y L+G K F++   ++  ++++A+ +           +    
Sbjct: 136 GSDAAALKTRAEPVSGG-YVLNGTKQFITQGSVAGVYVIVARTDPAPSPERKHLGISAFA 194

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
                 GL   R + K+G  ++ T +L   + F      L     G  + +K+L    + 
Sbjct: 195 FFRPETGLRIGRKEEKLGLNASDTAQLVLEDLFVAEDSLLGERGKGFYDVLKVLDGGRIG 254

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A M+V   R +L  A+ YA++R   G  + +   +   +A+ A ++ AA  L  + A  
Sbjct: 255 IAAMAVGLGRAALDYALRYAKQREAFGRPIAEYQGVSFKLAEAATELEAARLLYLKAAEL 314

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + EAA A       K +  ++A     EA++ +GG GYI++  + R++R++  
Sbjct: 315 KDGGRPYTLEAAQA-------KLFASEVAVKACDEAIQILGGYGYIKDYPVERYWRDARL 367

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   + L +   L
Sbjct: 368 TRIGEGTSEILKLVIARRL 386


>gi|264677846|ref|YP_003277752.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208358|gb|ACY32456.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 385

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 152/412 (36%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + ++ +++   E V     +ELA       P + A+   G       + P    + R   
Sbjct: 10  AWMNADIDAFREQVSRYIERELA-------PHVPAWRAQG-------YVP--REIWRGFG 53

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      +  +       A+++       + + E   + S    ++  +    T    
Sbjct: 54  TYGFLLPEMEEQWGGGGGNLAYQLVVQEE--LTKAEVHAITSVHTIASHYLLAYGTEEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P++ S E             +  G+ +TE   G+D+ A+ ++ Q+  +  Y ++G 
Sbjct: 112 QRWLPRLCSGE-------------LLAGIAMTEPSVGSDLKAMRTRAQRDGEH-YVINGS 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  +   +++A   G  G   V  ++ E  +  G    R   KIG   + T EL 
Sbjct: 158 KTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRVGRRLGKIGQHISDTAELF 217

Query: 291 FSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L G        +        +   + + + + +++A  + Y ++R   G
Sbjct: 218 FEDLRIPVSHLLGGTEGQGFKQLMSQLPYERMLLGVSAAAAIEMAVALTVDYTQQRKAFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + D    +  +A+ A       +          +    +E A  A+        WC +
Sbjct: 278 QTIADFQNTRFKLAECATTAHVVRSFVNDCIQRLLDGTLDNEAAYMAKW-------WCSE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ E ++  GG GY+EE  IAR Y ++    I  G+   M   +   L
Sbjct: 331 QQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQKIYGGANEIMKDLIARRL 382


>gi|288932664|ref|YP_003436724.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894912|gb|ADC66449.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 380

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 135/374 (36%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++    P    L +     G     +   +                 +  +  A
Sbjct: 26  PKANEIERSGEFP--KDLFKELADLGCFGLRYPEEYGGA------NADCVTFCIFCEEMA 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+S +  SA++ A  +T      +  K  S E       P  K      + +TE   G
Sbjct: 78  KGLLSLAA-SATIQAFQST-----HFIAKFGSEELKEEYLVPAIKGEKIGAICMTEPNAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+ +IT+   K  D         W  +  ++D + + A+     G   +   L      
Sbjct: 132 SDLGSITTTAVKDGDEYVINGVKTWVTNGSIADFYTVAARTSKGKGMEGIDFFLVPRKAE 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMKIL--IYLDSAIMS 324
           G+   R  +K+G R   T E+ F++               G +   +IL  I + +  +S
Sbjct: 192 GVEVGREIDKMGLRGLKTSEVVFNDVRIPADHLLGEKEGMGHIYLREILAEIRVSTGALS 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      + +AI YA+ R   G  +     ++  IA+ A ++ AA  L +  A   D+ +
Sbjct: 252 LGAGSAVIKDAIEYAKERVQFGKPIGKFQAVRLMIAEAATELEAAKWLVYHAAWLIDKGR 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EA+ A       K +  + A   +  A       G+ ++ ++ R YR+     I  
Sbjct: 312 KPIKEASMA-------KLFASEAAVKAVDIASRVFASYGFSKDHAVERFYRDVRFLIIGG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   + L + + L
Sbjct: 365 GTSEILKLIIASEL 378


>gi|328762225|gb|EGF75721.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL099PA1]
          Length = 382

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 131/375 (34%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y + R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQNRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|294632990|ref|ZP_06711549.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830771|gb|EFF89121.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 129/378 (34%), Gaps = 28/378 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             ++E    +   L+ +    G++       +          +          +     M
Sbjct: 27  VQELEHSNTYPEALIEQMKKLGIYGLAIPEEYGGNPVSMPCFVLVTEELSRGWMSLAGAM 86

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A ++    T    + + P++ +              ++   + LTE  GG+D+ 
Sbjct: 87  GSHTVVAKLLVHFGTEEQKRRYLPQMATG-------------AMRATMALTEPGGGSDLQ 133

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGL 270
           A+ +  +K  D         W  +S  +    ++ + +         +  LL +  P GL
Sbjct: 134 AMRTVARKDGDEYVVNGSKTWITNSRRAGLIALMCKTDPTASPAHKGISILLAEHGP-GL 192

Query: 271 CYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              R   K+G +   + EL F +        L G      G +        L  A  ++ 
Sbjct: 193 TVSRDLPKLGYKGVESCELAFDDYRVPADAVLGGVEGKGFGQMMKGLETGRLQVAARALG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L +++ YA+ R   G  +     +   +AD+A  + AA  L+   A   +  +  
Sbjct: 253 VGRAALEDSLAYAQERESFGKPIWQHQSIGHYLADMATSLTAARQLTLYAAREAEAGRRV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A       K +  +    +   A+   GG GY  E  + R++R++P   +  G+
Sbjct: 313 DMEAGMA-------KLFASETGMQIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGT 365

Query: 447 GNAMVLDVLNLLEKGTNL 464
                  +   L K   L
Sbjct: 366 NEIQKNVIAAQLVKRGGL 383


>gi|326403394|ref|YP_004283475.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050255|dbj|BAJ80593.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 391

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 139/403 (34%), Gaps = 35/403 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L    + +A MA     +     P    WD     P    ++R     G+       
Sbjct: 12  QFALDEAQRAIAEMARGFADE--RLAPHALEWDAARHFPL--DVIREGAALGMGGIYVRE 67

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +                    MS     A MV         +D  P + S E
Sbjct: 68  ESGGSGLTRLDAALIFEALATGCPAVSAYMSIHNMVAWMVDRFGDDAQRRDVLPALVSME 127

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
           +                  LTE   G+D AA+ ++  +  D  Y L G K F+S   + D
Sbjct: 128 H-------------LASYCLTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATD 173

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            ++++A+  G  G   +   L      GL +   + K+G  +  T ++ F +        
Sbjct: 174 LYLVMAR-SGGAGPRGISSFLVPKDAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFR 232

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           L       E  +I +       ++    S+ G + +L +A  Y   R   G  L D   +
Sbjct: 233 LG---AEGEGFRIAMSGLDGGRVNIGACSLGGAQAALEKAQRYMGEREAFGRRLEDFQAL 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A ++ AA    +  A S D  ++ +           + K         V   A
Sbjct: 290 QFRLADMATELEAARLFLWSAAASLDRGEADT------TRRCAMAKRIATDTGFEVANNA 343

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY+ E  I +  R+   + IL G+   M L V   L
Sbjct: 344 LQLFGGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRLIVARGL 386


>gi|288922878|ref|ZP_06417041.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345769|gb|EFC80135.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 396

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 138/403 (34%), Gaps = 37/403 (9%)

Query: 67  SCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +  A EL R+A +    +L       ER     F      L R     GL    +   + 
Sbjct: 9   TAEAAELIRLARDLAERELAPRVVDAER--DASFP---RDLFRLLGAAGLLSLPYAEKYG 63

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
              +     ++A           G  +S    S   +A   +    + W P++       
Sbjct: 64  GGGQPYEVYLQALEEIGAVWASVGVGVSVHALSCFPLAHFGSEEQRERWLPEMLGG---- 119

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                     +     L+E   G+D AA+ ++  +  D         W      +D + +
Sbjct: 120 ---------DLLGAYCLSEPHAGSDPAAMRTRAVRDGDDYVINGAKAWTTHGGDADFYTV 170

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           +A+         +   L      GL     ++K+G   + T  + F      +       
Sbjct: 171 MARTSDER--RGISCFLVPAGTPGLSADPPEHKMGLTGSNTATMRFDAVRVPV---ERRI 225

Query: 306 TGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359
               E + I L  LDS  + ++ +   LA+     A+ YA+ R   G  +ID   +   +
Sbjct: 226 GAEGEGLSIALAGLDSGRLGIAAVATGLAQGALDHAVAYAKEREAFGKAIIDHQGLAFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + +A A +   A   D     + E       A I K      A  V  +A++ +
Sbjct: 286 ADMAAAVGSARATTLAAARLRDLGLPFATE-------ASIAKLVATDNAMKVTTDAVQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           GG GY  +  + R+ RE+    I  G+     + V   L  G 
Sbjct: 339 GGYGYTRDFPVERYMREAKVMQIFEGTNQIQRMVVGRALAAGR 381


>gi|148252258|ref|YP_001236843.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146404431|gb|ABQ32937.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 389

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 143/393 (36%), Gaps = 29/393 (7%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+++ P+  L  +      P  + W+     PA H L ++    G         F    
Sbjct: 4   TADHDEPRRILQKFIAAEINPHVDEWEAAGIFPA-HELFKKLGSLGFLGLNKPVEFGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++ +      +MA+            +  +   M TP + +       S E      
Sbjct: 63  LDYSYAL------MMAEELGAITCGGVPMAIGVQTDMATPALARFG-----SDELRREFL 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP       + LG++E   G+D+A+I +  +   D      G  W  +   +D   +LA 
Sbjct: 112 APAVSGDAVVCLGVSETGAGSDVASIKTTARSDGDDYVINGGKMWTTNGTQADWMCLLAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
                       ++      G+   R  +K+G  S+ T ++ F N        +     G
Sbjct: 172 TGDGPVHRNKSLIIVPMKTKGVQIARKLDKLGMHSSDTAQIFFDNVRVPKRNRVGEEGQG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M       L  A   +      +A+ I Y R R V G  ++D  V+   +A++  +
Sbjct: 232 FTYQMLQFQEERLWGAAACLKSHEYIIAKTIEYTRERKVFGRSVLDNQVVHFKLAEMQTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL +R A +    +  +        +A + K    ++   +    ++  GG G++
Sbjct: 292 VELLRALIYRAAEALIAGEDVTR-------LATMAKLKAGRLGRELTDACLQYWGGMGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  ++R YR++   SI  G+   M+  +  ++
Sbjct: 345 NETPVSRAYRDARLTSIGGGADEVMLTILCKMM 377


>gi|170722513|ref|YP_001750201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760516|gb|ACA73832.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 381

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 147/412 (35%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S +  ++E   E V    A E+A       P+L  +   G       + P      R   
Sbjct: 9   SWMDSDIETFREQVRRYIAAEMA-------PKLPGWREQG-------YIP--RETWRPFG 52

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D ++       A+++       + + E  + ++    ++  +    T    
Sbjct: 53  EMGFLLPELDEAYGGAGASLAYQLVV--QDELTKAEMPNNVTVHSIASHYIMDFGTEEQK 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E                G+ +TE   GTD+ AI ++ ++  D  Y + G 
Sbjct: 111 QRWLPKLSSGEM-------------LAGIAMTEPGCGTDLKAIATRARRDGDH-YVIDGA 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  + + +++    G VG   +  ++ +     G    RL  KIG  ++ T EL 
Sbjct: 157 KTFITNGFTCSLLIVVARTGEVGSKGLSLIVVETEDLPGFRVGRLLEKIGMPASDTAELF 216

Query: 291 FSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L G        +        +  A+ + + +  +L   I Y + R + G
Sbjct: 217 FGDVRVPVDQLLGGVEGHGFKQLMGQLPYERMSIAVPAAAVIDRALELTIEYTKERKIFG 276

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L D    +  +A++A                  +     E A  A+        WC +
Sbjct: 277 APLFDMQATRHKLAELATIAHVVRTFVNDCIQRLLDGTLDDEAAYMAKW-------WCTE 329

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V  E ++  GG G++ E  IAR Y  S    I  G+   M   +   L
Sbjct: 330 QQCRVTDECLQLFGGYGFMAEYPIARMYAASRVQKIYGGANEVMKELIARKL 381


>gi|110833849|ref|YP_692708.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646960|emb|CAL16436.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 385

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 143/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P    W+     P  H + ++    GL        F  
Sbjct: 4   TQEHEELRRTVRNF--VDKELNPHVREWEDAGRFP-IHEVFKKMGDLGLLGVTKPEEFGG 60

Query: 127 VVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++ +  +     +        +   +  +   +A   +  + +++          
Sbjct: 61  MGLDYSYGMVMSEEMGRVHCGGVPLAVGVQTDMATPAIARFGSDELRRNYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
               AP     +   + ++E   G+D+AA+ +   K  D         W  +SP +D F 
Sbjct: 112 ----APAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDDYVINGTKMWITNSPSADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           +LA             ++      G+   +  NK+G R + T ++ F N       L+G 
Sbjct: 168 LLANTSDGKPHVNKSLIVVPKDAGGITVDKPLNKLGMRCSETAQVFFDNVRVPQRNLIGQ 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             L +A  S+ GM   + E I YA+ R + G  LID   +   +A+
Sbjct: 228 EGMGFMMQMMQFQEERLFAAANSLKGMEHVIDETIAYAKDRKIFGMPLIDNQSVHFRLAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ +  AL++R    +   K           +A + K    +++  V    ++  GG
Sbjct: 288 LQSEVESLRALTYRACEMYVNGKD-------VLQLASMAKLKVGRLSREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ E    + +R+    SI  G+   M+  +   ++
Sbjct: 341 NGFMWENPAGQLFRDGRLGSIGGGADEIMLGIICKTMD 378


>gi|262197630|ref|YP_003268839.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262080977|gb|ACY16946.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 22/377 (5%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    PA H + R+    GL        +  +    ++ +       MA
Sbjct: 20  EEINPHVDAWEEAGAFPA-HEVFRKLGAQGLLGVTKPERYGGMGLDYSYSL------AMA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +  +   M TP + +       S E       P       + LG++E
Sbjct: 73  EALGAIRCGGVPMAIGVQTDMATPALARYG-----SEELCERFLRPTISGEFVVCLGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+AAI +  ++  D         W  +   +D  ++LA             L   
Sbjct: 128 VGAGSDVAAIRTHARRDGDDYLIRGSKMWITNGTQADYMVLLANTGDGEPHRNKSLLCVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+   R  +K+G R + T E+ F +        +     G +  M+      L  A
Sbjct: 188 MDTPGVQVARKLDKLGMRCSDTAEVVFEDVRIPQRFRIGEEGKGFLYQMQQFQEERLWGA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M  ++A+ I Y R R V G  LID  V+   +A++A ++    AL +R    + 
Sbjct: 248 TAWLVPMDQAIADTIAYTREREVFGKPLIDNQVIHYRLAELATEVEMLRALVYRAVELYI 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +        +A + K    +++  V    ++  GG G++ E  I+R YR+    S
Sbjct: 308 GGEDVTR-------LASMVKLKAGRLSREVADSCLQYYGGMGFMNETPISRLYRDCRITS 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+  +   +
Sbjct: 361 IGGGADEVMLSIICKTM 377


>gi|226308146|ref|YP_002768106.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187263|dbj|BAH35367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 392

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/414 (21%), Positives = 143/414 (34%), Gaps = 44/414 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             +  ELE + +   +         A + TP    +   G         P   +  R   
Sbjct: 16  PWMDDELEAVADLARN-------FFAKHVTPHQKRFASQG--------FPD-KSAYRELG 59

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL        +       AH        +MA   +  L   S      +         
Sbjct: 60  TLGLAGMSIPTEYGGGGGTFAHDAVLFHEQVMAGDHSLQLGVHSGIVPHYLNAYADHEHK 119

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W PK+ S E+                + +TE   G+D+  IT++  +  D  Y +SG 
Sbjct: 120 LRWLPKLVSGEW-------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-YLISGA 165

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRSNATVE 288
           K F+S+    D  I+ A+ +  +G   V  ++   D +  G    R+  K+G +   T E
Sbjct: 166 KTFISNGRNCDLVIIAAKTDPGLGARGVSLIVAEVDDNTPGFERGRILEKVGQKGQDTTE 225

Query: 289 LEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F          L     TG  + M+ L    L   + + + M  ++A  + Y + R++
Sbjct: 226 LFFDRLRVPATNLLGDREGTGFAQLMQQLLPERLICGVAATAAMERAVALTVEYTKSRNM 285

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L D    +  +A+ A     +           D+   +          A + KYW 
Sbjct: 286 FGQTLFDLQNTRFELAECASIARISRTF-------IDDCIVKYLAGQLDATTAAMAKYWL 338

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                AVI   ++  GG GYI E  IA+ Y ++    I  GS   M   V   L
Sbjct: 339 TDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVMKDLVARSL 392


>gi|187927212|ref|YP_001897699.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|309780089|ref|ZP_07674841.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|187724102|gb|ACD25267.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|308921121|gb|EFP66766.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 134/369 (36%), Gaps = 28/369 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLM 152
           W++ E  P   AL R +   GL    +   +         ++         A       +
Sbjct: 37  WEEAETFP--RALYREAADLGLLGIGFPEEYGGTPGDLFLELAMIEELTRAASGGLLASL 94

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A  +    +  +     P I S E                 L +TE  GG+D+A
Sbjct: 95  FSHTIGAPPIVAGGSAELKARVLPAILSGE-------------KISALAITEPSGGSDVA 141

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           ++T++  +  D  Y +SG K F++S M   +I +A   G  G   +  LL +G   GL  
Sbjct: 142 SLTTRAVRDGDH-YVVSGSKIFITSGMRADYITVAVRTGEAGAGGISVLLVEGDTPGLSR 200

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             LK K+G   + T +L F N     G LLG  N     V        L  A+ +    R
Sbjct: 201 TPLK-KMGWWCSDTAQLHFDNCRVPVGNLLGAENRGFELVMRNFNHERLALAMQAYGLAR 259

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L EA+ +A +R   G  L+   V ++ +  +A  I A  AL   L        S   +
Sbjct: 260 TCLIEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDLMRRMQAGDSPVAQ 319

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +  A  +  +C   A       ++ +GG G++      R YRE     I  G+   
Sbjct: 320 LCMLKNFATQSLQFCADTA-------VQLLGGMGFMRGTKSERIYREVKVYMIGGGAEEV 372

Query: 450 MVLDVLNLL 458
           +       L
Sbjct: 373 LSDLAARQL 381


>gi|301763076|ref|XP_002916956.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 421

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 122/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL  +    +   +                        +  +      + + 
Sbjct: 77  LIKRAWELGLMNTHIPENCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPLLIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A I ++ ++  D  
Sbjct: 137 GNDQQQKKYLGRLT-------------EEPLMCAYCVTEPVAGSDVAGIKTKAERKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDLDPKAPANRAFTGFIVEADTPGVQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVRVP---KENVLIGEGAGFKIAMQAFDKTRPPVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLVEHQGISFLLAEMAMKVEIARLSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  + +  R++    I  G+     L +  
Sbjct: 354 ASIAKAFAADIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAR 413


>gi|120599237|ref|YP_963811.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559330|gb|ABM25257.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1]
          Length = 596

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 96/550 (17%), Positives = 203/550 (36%), Gaps = 71/550 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    R+ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYRQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++       +  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDL-----GSSGKKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYR 519
            + + +      ++ +  ++ L D     ++  G   +L  + A       A+S A L  
Sbjct: 469 LVTEFIKLHSTNAAMQPYVSGLMDCAGDLQKASG---YLAAQAATNPDIIGAASMAYLEL 525

Query: 520 AGMNDIADVF 529
            G+  +A ++
Sbjct: 526 FGVTALAWMW 535


>gi|228469299|ref|ZP_04054325.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3]
 gi|228309198|gb|EEK17800.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3]
          Length = 576

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 95/491 (19%), Positives = 171/491 (34%), Gaps = 56/491 (11%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A+      + LE++GE          A   +   P LH          +V + P     L
Sbjct: 45  ADALDSYQRVLEIVGEVCG-EVIAPNAAEVDLTGPTLHE--------GRVSYDPLTAQNL 95

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                 GL      R +  +       I AA +   A     +L       A  +    +
Sbjct: 96  DTVRQTGLMGMALPRRYGGLNMPITPYIMAADMVSRADAGFENLW-GLQDCAETLYEFGS 154

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIY 226
               + + P++ + E               + + LTE   G+D+ A+  +     +D  +
Sbjct: 155 EDQRERFLPRVCAGE--------------TMSMDLTEPDAGSDLQAVMLKATYNEADQQW 200

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  SD  ++LA+ E G      +   + D    G+  +R+++K+G +   
Sbjct: 201 YLNGVKRFITNGDSDIHLVLARSEEGTKDARGLSMFIYDAKKGGVTVRRIEHKMGIKGVP 260

Query: 286 TVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           T EL F +    L G+  +     V  +     L     +V     +  EA  YA  RH 
Sbjct: 261 TCELVFKDAPAELCGERRLGLIRYVMSLMNGARLGIMAQAVGISEAAYREAKAYAADRHQ 320

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------------- 391
            G  +   P +   +A I     A  A  +  +   D  K+  + A              
Sbjct: 321 YGHAIDKFPAVYEMLALIRAKADATRAHLYETSRFVDMYKAYDDIARERKLTPEERKEQK 380

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A    PI K    ++A   + + ++  GGSGY+++ +  R YR+    +I  G+ 
Sbjct: 381 YYSRLADAYTPIGKGMSTELANQNVYDCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTT 440

Query: 448 NAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKE--------- 496
              V+  +  +  GT     E+             K+++    +    C E         
Sbjct: 441 QLQVVAAIRHVTTGTYFARLEEYQQVAVSPEWQETKELLATWIERAKACTELVTEAKDQT 500

Query: 497 -DKGLARFLTE 506
                AR L E
Sbjct: 501 LLDYHARRLVE 511


>gi|333024694|ref|ZP_08452758.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744546|gb|EGJ74987.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 390

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 138/376 (36%), Gaps = 35/376 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D  E H   + ++R     GL    +   +  +         A           A  L +
Sbjct: 32  DYYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGLALEELARVDSSVAITLEA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  + L  T    ++W P++ + E             +    GLTE   G+D   
Sbjct: 92  GVSLGAMPIHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGG 138

Query: 214 ITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPN 268
             +          + ++G K F+++  +D    + +  V GR   G   +  ++      
Sbjct: 139 TRTTAVLDEATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISSIIVPSGTP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSG 327
           G       +K+G  ++ T EL F +        L  +  G  + ++I   LD   ++++ 
Sbjct: 199 GFTVAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGYAQFLRI---LDEGRVAIAA 255

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA     E++ YA+ RH  G  +     ++  IAD+ L    A       A+    
Sbjct: 256 LATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMELRAHTARLSWRDAASRLVR 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +EAA A       K +   +A     +A +  GG G++ E  +AR +R++    I
Sbjct: 316 GEAFKKEAALA-------KLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRDAKILEI 368

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 369 GEGTSEVQRMLIAREL 384


>gi|296270066|ref|YP_003652698.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092853|gb|ADG88805.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 398

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 130/384 (33%), Gaps = 33/384 (8%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++ R    GL   +  + +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTEIVERLKEMGLFGLMIPQEYGGLGESLLTYALVVEELSRGWMSISGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A ++    TP   + + P+             M +  +     ++E   G+D+AAI
Sbjct: 95  HFIVAYLIRRHGTPEQKQYFLPR-------------MAEGRIRGAFSMSEPHCGSDVAAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSP----- 267
            +   +  D         W  +   ++   +LA+   +G      +   L +  P     
Sbjct: 142 RTTAVRSGDEYVIHGRKMWLTNGASANLIALLARTGEDGGRPHANMTTFLIEKEPGFGET 201

Query: 268 -NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
             GL       K+G +   T EL            L G+       + D   +  ++ A 
Sbjct: 202 RPGLTVPGKIQKMGYKGVDTTELVLDGVRVPADRVLGGEPGKGFYQMMDGVEVGRVNVAA 261

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +      +   AI YA++R   G  L     ++  +A++A  + AA  +    A   D 
Sbjct: 262 RACGMALRAFELAIRYAQQRETFGEPLHRHQAIRFRLAEMATKVEAAHQMMVMAARRKDT 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A+ +A        +    V+ +A    GG GY  E  I R YRE+P   I
Sbjct: 322 GERGDLEAGMAKYLAA-------EYCKEVVEDAFRIHGGYGYSTEFEIERLYREAPMLLI 374

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFE 466
             G+     + +   L     L E
Sbjct: 375 GEGTSEIQKMIIGRRLLGEYRLPE 398


>gi|313886903|ref|ZP_07820606.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923600|gb|EFR34406.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 577

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/530 (18%), Positives = 185/530 (34%), Gaps = 59/530 (11%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A+      + LE++GE          A   +   P LH          +V + P     L
Sbjct: 45  ADALDSYQRVLEVVGEVCG-EVIAPNAAEVDLTGPTLHE--------GRVSYDPLTAQNL 95

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                 GL      R +  +       I AA +   A     +L       A  +    +
Sbjct: 96  DTVRQTGLMGMALPRRYGGLNMPITPYIMAADMVSRADAGFENLW-GLQDCAETLYEFGS 154

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIY 226
               + + P++ + E               + + LTE   G+D+ A+  +     +D  +
Sbjct: 155 EDQRERFLPRVCAGE--------------TMSMDLTEPDAGSDLQAVMLKATYNEADQQW 200

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  S+  ++LA+ E G      +   + D    G+  +R++NK+G +   
Sbjct: 201 YLNGVKRFITNGDSNIHLVLARSEEGTKDARGLSMFIYDAKKGGVTVRRIENKMGIKGVP 260

Query: 286 TVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           T EL F +    L G+  +     V  +     L     +V     +  EA  YA  RH 
Sbjct: 261 TCELVFKDAPAELCGERRLGLIRYVMSLMNGARLGIMAQAVGISEAAYREAKAYAADRHQ 320

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------------- 391
            G  +   P +   +A I     A  A  +  +   D  K+  + A              
Sbjct: 321 YGHAIDKFPAVYEMLALIRAKADATRAHLYETSRFVDMYKAYDDIARERKLTPEERKEQK 380

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A    PI K    ++A   + + ++  GGSGY+++ +  R YR+    +I  G+ 
Sbjct: 381 YYSRLADAYTPIGKGMSTELANQNVYDCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTT 440

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
              V+  +  +  GT      F+ LE+    +        ++ ++   E    A+  TE 
Sbjct: 441 QLQVVAAIRHVTTGT-----YFARLEEYQQVAVSPEWQETKELLASWIE---RAKACTEL 492

Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           +  A     L       +           +C   H +L    +   + + 
Sbjct: 493 VTAAKDQTLLDYHARRLVE-------MCGHCIFAHLLLIAAQDRPDLYEH 535


>gi|296165498|ref|ZP_06848029.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295899139|gb|EFG78614.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +       A  +   +      +     M     
Sbjct: 36  EYPEKWIEQMK---QIGIYGLAIPEEYGGSPVSMACYVLVTQELARGWMSLAGAMGGHTV 92

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++ L  T    + + P + S +   T             + LTE  GG+D+ ++T+ 
Sbjct: 93  VAKLLTLFGTQEQKRAYLPAMASGDMRAT-------------MALTEPGGGSDLQSMTTT 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRL 275
                D         W  ++  S    +L + + +       +  LL +  P GL   R 
Sbjct: 140 AVSDGDDFVVTGAKTWISNARRSGLIALLCKTDPKATPRHTGISILLVEPGP-GLTISRD 198

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F          L      G  + MK L    +  A  ++     +
Sbjct: 199 LPKLGYKGVESCELSFDGYRVAESAILGGVPGKGFSQMMKGLETGRIQVASRALGVATAA 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ Y+++R   G  +     +   +AD+A  + AA  L+   A+ +D  +    EA 
Sbjct: 259 LEDALAYSQQRESFGQPIWKHQAIGHYLADMATKLTAARQLTLYAADRYDSGERTDMEAG 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 319 MA-------KLFASETAMEIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQR 371

Query: 452 LDVLNLL 458
             + + L
Sbjct: 372 NVIASQL 378


>gi|15596384|ref|NP_249878.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107100636|ref|ZP_01364554.1| hypothetical protein PaerPA_01001662 [Pseudomonas aeruginosa PACS2]
 gi|116049119|ref|YP_792079.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892849|ref|YP_002441718.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254234320|ref|ZP_04927643.1| hypothetical protein PACG_00160 [Pseudomonas aeruginosa C3719]
 gi|254239554|ref|ZP_04932876.1| hypothetical protein PA2G_00171 [Pseudomonas aeruginosa 2192]
 gi|296390442|ref|ZP_06879917.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313106162|ref|ZP_07792415.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9947113|gb|AAG04576.1|AE004549_3 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115584340|gb|ABJ10355.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126166251|gb|EAZ51762.1| hypothetical protein PACG_00160 [Pseudomonas aeruginosa C3719]
 gi|126192932|gb|EAZ56995.1| hypothetical protein PA2G_00171 [Pseudomonas aeruginosa 2192]
 gi|218773077|emb|CAW28889.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310878917|gb|EFQ37511.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 379

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 129/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMV 162
            A+ R++   G      D  +     K     +     L    E G ++   S      +
Sbjct: 40  RAVWRKAGEMGFLLPWADEEYGGAGLKDFRYEQIMCEELARINEPGFMIPLHSALCGPYI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A   +        P I   E               + + +TE   G+D+A + S      
Sbjct: 100 AEYGSAEQKARLLPGIVRGE-------------TILAVAMTEPSAGSDLAGMRSTAVDKG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + L+G K F+S+ + +D  I+ A+ +      +    L +    G    R   K+G 
Sbjct: 147 DH-WLLNGSKVFISNGLLADLVIVAAKTDPANKHAM-GLFLVERGMQGFERGRNLKKLGM 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHY 338
           +S  T EL F+N        L  + G    +  +     L +A  +V+G   +L   I Y
Sbjct: 205 KSQDTAELFFNNVRVPKENLLGDAKGGFFYLMNMLAQERLTNACGAVAGAEAALQATIDY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +      +  +A++   I  A   + R     ++ K   E       +A 
Sbjct: 265 VKERQAFGRPVAHFQNTRFKLAEMRTQIDVAQVFTDRCVMDHNQKKLSPE-------VAA 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  ++   V+ E ++  GG GY+ E  I R Y  +    I  G+   M   +   +
Sbjct: 318 EAKLFTTELLGKVVDEGVQLHGGWGYMWEYPICRMYANARIQRIFAGTSEIMKEIISRGM 377

Query: 459 E 459
           +
Sbjct: 378 K 378


>gi|312199535|ref|YP_004019596.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230871|gb|ADP83726.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 403

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 143/389 (36%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+      +        +  I +  L+       
Sbjct: 28  PAASEWDEREETP--WPVIQEAAKIGLYGFDSLATMFGDETGLSLPIASEELF-WGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  S  +A+ ++   T     +WAP+ +    DP                ++E   G
Sbjct: 85  GLSIMGSSLAAAGISSAGTLEQLVEWAPQCYGDASDP----------KLGAFCVSEPGAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D++++ ++ +     D         W  +  +++  +++A V+  +        +   +
Sbjct: 135 SDVSSLRTRARYDEATDEWVLNGQKAWITNGGIANIHVVVASVDPELKSRGQATFVIPPN 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   +   K+G R++ T +L F +                           +     
Sbjct: 195 TPGLVAAKKIKKLGLRASHTADLFFDDVRVPGSCLLGGKDKLDARLAKAREGGHSRGQGA 254

Query: 312 MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M             +V   R +   A+ YA+ R   G  +I+   +  A+AD+  +I AA
Sbjct: 255 MATFERTRPTVGAQAVGIARAAYEYALDYAKTRETFGRPIIENQAIAFALADMKTEIDAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A          ++  +      ++K    ++A AV  +A++ +GG+GY  E  
Sbjct: 315 RLLIWRAAWM------GKQDKTFLAGEGSMSKLKAGEVAVAVTEKAVQILGGAGYSREHP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R YR+S   +I  G+     L +   +
Sbjct: 369 VERMYRDSKIYTIFEGTSEIQRLVIARAI 397


>gi|302555232|ref|ZP_07307574.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472850|gb|EFL35943.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 401

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    +     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDIRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  K  +         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVKDGEEYVLNGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPADRVLGGVTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVQYAQQRHTFGRPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|317405955|gb|EFV86233.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 132/397 (33%), Gaps = 23/397 (5%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+Y L+    ++  +      +     P     D    +P  H +       GL    + 
Sbjct: 4   GQYALNEEQLQIQDLIRRVARE--KVAPRANEIDSSAEYP--HDMYALLKALGLFTLPFP 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +       +  +       +    A  L+   V     +    T        P + S 
Sbjct: 60  EQYGGAGSMLSACLAIEEFGRVCYNTAYLLLVQWVPFG-AILHGGTEEQKARLLPGLASG 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                         +      TE + G+D++ I ++ +K  +G        W  +S ++D
Sbjct: 119 -------------DLRGAFSTTEAQSGSDVSGIKTRAEKAPNGFLLNGAKIWCTNSDIAD 165

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ A+         +   + +    GL   R + K+G R   +  L   N        
Sbjct: 166 FILVAAK-YRENDKDGISLFIVERGTPGLQVGRKEEKMGARGVPSCPLFLDNVLVPEANM 224

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L      V +             V   + +L  AI +   R   G  + +   ++  +AD
Sbjct: 225 LGGGFKSVMEAFNASRPLIGARGVGLAQGALDHAIDFVTNRTAFGQQVGEFQGVRWMLAD 284

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A+   AA  L +R A+  D     +        +A + K +   +A  V  +A++  G 
Sbjct: 285 MAMQTEAARQLVYRAASMVDGGAPAA----ALAPVAAMAKCFASDVAMKVATDAVQLFGA 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G   E  I R++R++    I+ G+       + N L
Sbjct: 341 AGISSEYPINRYFRDAKVLQIIEGTNQIQRNIISNSL 377


>gi|331697454|ref|YP_004333693.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952143|gb|AEA25840.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 124/366 (33%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G+        +                     +     M      + ++  
Sbjct: 39  KLIEQMKQLGIFGLAIPEPWGEAPVSMPCYALVTAELARGWMSLAGAMGGHTVVSKLLVA 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + P++ + E   T             + LTE  GG+D+ A+T+  ++  D 
Sbjct: 99  FGTKEQQDRYLPRMATGEIRAT-------------MALTEPGGGSDLQAMTTTARRDGDD 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  +S  S    ++ + +         V  LL +  P GL   R   K+G +
Sbjct: 146 YVVNGAKTWITNSRRSQLIALMCKTDPAAEPKHRGVSILLVEHGP-GLTVSRDLPKLGYK 204

Query: 283 SNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F +        L G        +        +  A  ++   + +  +A+ Y
Sbjct: 205 GVESCELSFDDYRTPASSVLGGTEGRGFAQMMKGLETGRIQVASRALGVAQAAFDDALAY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A  I AA  L    A+ FD  +    EA  A     
Sbjct: 265 AQERESFGKPIWQHQSIGNYLADMATKITAARQLILFAADRFDAGQRCDMEAGMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  V  +A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 320 --KLFASETAMQVALDAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIAAQL 377

Query: 459 EKGTNL 464
            K   L
Sbjct: 378 VKRGGL 383


>gi|324504264|gb|ADY41841.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 340

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 117/320 (36%), Gaps = 33/320 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +M PS+  A ++ L       K +                +    +     +TE   G+
Sbjct: 36  CIMGPSLAVAPVL-LAGNEEQKKKYL-------------GMLAAEPLIAAYCVTEPGAGS 81

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGS 266
           D+AAI ++ +K  D         W      +  F +LA+ E              + DG 
Sbjct: 82  DVAAIKTKAEKKGDSYVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRAFTAFVVDGD 141

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G+   + +  +G R + T  + F +    ++   NV   P    K+ +          
Sbjct: 142 TPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGFKVAMGAFDTTRPGV 198

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V     +L EA  YA  R   G  +     +   +AD+A+++  A  +++R A   
Sbjct: 199 AAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINLELARLVTYRAAVDV 258

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +  S         A I K +    A    A A++ +GG+G+  E  + +  R++   
Sbjct: 259 DNKERSS-------YYASIAKCFAADTANITAANAVQILGGNGFNSEYPVEKLMRDAKIY 311

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L +
Sbjct: 312 QIYEGTSQIQRVVISRHLLQ 331


>gi|297616645|ref|YP_003701804.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144482|gb|ADI01239.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 608

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 90/489 (18%), Positives = 178/489 (36%), Gaps = 76/489 (15%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV    +        +++G   +  D   +     QA        ++ A      L   +
Sbjct: 73  KVITPQSTKDAYYFIVNNGFAATNVDPD-DESALPQAVVWTLNEYFIAANPSIQTLWLAN 131

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A ++    +  + + + PK++S ++  T             + LTE + G+D+   T
Sbjct: 132 SGAAGLIRDFGSEELKRIYLPKMYSGQWAGT-------------MVLTEPQAGSDVGDAT 178

Query: 216 SQGQKISD-GIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
           ++     + G+Y + G K F+S    D       ++LA++EG       +  F+VP+ L 
Sbjct: 179 TRAIPTDEPGVYLIKGTKCFISGGEQDVTENIVHLVLARIEGAASGTRGLSLFVVPKYLP 238

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL------NVSTGPV 309
           +     G  N +    +++K+G+R + T  L F       GFLLGD             +
Sbjct: 239 NADGNPGEWNDITCVGIEHKLGHRGSPTCVLNFGEEGKCKGFLLGDPPGEDGSGQGMAQM 298

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GG-ILIDQPVMKRAIA 360
             M     L S +   +    +   A+ Y + R           G   +I    +KR + 
Sbjct: 299 FRMMNEERLMSGLSGCALAASAYHNAVKYCQERIQGRAATNPKAGRCAIIKHEDVKRMLM 358

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
                + A  A++ +     D      +     +   +  +  PI K +C  +A   I+E
Sbjct: 359 FQKAHVEAFRAMAIQTYYWVDIEKYSSDPDLVQQAKVFLEVNTPIVKAYCSDVALQCISE 418

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
           A++C GG G+ EE  IA  YR++    I  G+     LD++   +  K   +F      +
Sbjct: 419 ALQCYGGYGFSEEYPIAEIYRDARIYPIWEGTNYIQALDLVGRKMTMKKGQVFAAWLKHI 478

Query: 473 EQDLGSSGKK-------------------VITILRDSISLCKEDKGLARFLTEKIALASS 513
           +  + ++ K                    ++ +L+   +     +  A  L        +
Sbjct: 479 QDFIEANKKAPGFEKEFEVYIDGWNKYNELLKVLQKLFATPGMAQLYATRLLHATGKLWA 538

Query: 514 AAALYRAGM 522
              L    +
Sbjct: 539 GKLLLEMAL 547


>gi|121592538|ref|YP_984434.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604618|gb|ABM40358.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 384

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 128/377 (33%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    + R++  +GL  ++    +        H               
Sbjct: 31  PFHADWERQGIVP--KEVWRKAGREGLLNTMLPEPYGG-GGDFGHAAVLIEEVGRTNATG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    T      W P++ + E             +   + +TE   G
Sbjct: 88  LGFPLHSDIVAPYINTYGTKAQKDRWLPRMAAGE-------------LIGAIAMTEPGAG 134

Query: 209 TDIAAITSQGQKI---SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
           +D+ ++ +    +       Y ++G K F+++ + S+  I++A+    +G   V  ++ +
Sbjct: 135 SDLKSVRTTATLVKSSEGDHYVINGSKTFITNGINSELVIVVAKTAPELGAKGVSLIVVE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   KIG  +  T EL F N       LLG+ N+    +        L  A
Sbjct: 195 EGTPGFSKGRKLEKIGLMAQDTSELFFDNVRVPVDNLLGEPNMGFKYLMHELAQERLVVA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + + S +   L + I Y R R   G  + D    +  +A+                    
Sbjct: 255 VRAASCIETFLQKTIDYTRERKAFGQPVFDFQNSRFKLAEAKAQATMLRTFVDECMKLHM 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K   E AA         K     +   ++ E ++  GG GY+ E  + R + ++    
Sbjct: 315 QRKLTPERAAM-------VKLNATALQNKLLDEFLQLHGGYGYMTEYQVGRAWTDARIGR 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M   +   L
Sbjct: 368 IYGGSDEIMKEIIARTL 384


>gi|148259637|ref|YP_001233764.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146401318|gb|ABQ29845.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 391

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 81/400 (20%), Positives = 136/400 (34%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L    + +A MA     +     P    WD     P    ++R     G+       
Sbjct: 12  QFALDEAQRAIAEMARGFADE--RLAPHALEWDAARHFPL--DVIREGAALGMGGIYVRE 67

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +                    MS     A MV         +D  P + S E
Sbjct: 68  ESGGSGLTRLDAALIFEALATGCPAVSAYMSIHNMVAWMVDRFGDDAQRRDVLPALVSME 127

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
           +                  LTE   G+D AA+ ++  +  D  Y L G K F+S   + D
Sbjct: 128 H-------------LASYCLTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATD 173

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            ++++A+  G  G   +   L      GL +   + K+G  +  T ++ F +        
Sbjct: 174 LYLVMAR-SGGAGPRGISSFLVPKDAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFR 232

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG                 ++    S+ G + +L +A  Y   R   G  L D   ++  
Sbjct: 233 LGAEGEGFRIAMSGLDGGRVNIGACSLGGAQAALEKAQRYMGEREAFGRRLEDFQALQFR 292

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ AA    +  A + D  +      A A     + K         V   A++ 
Sbjct: 293 LADMATELEAARLFLWSAAAALDRGE------ADATRRCAMAKRIATDTGFNVANNALQL 346

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ E  I +  R+   + IL G+   M L V   L
Sbjct: 347 FGGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRLIVARGL 386


>gi|239945420|ref|ZP_04697357.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239991882|ref|ZP_04712546.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291448876|ref|ZP_06588266.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291351823|gb|EFE78727.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 401

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/379 (17%), Positives = 128/379 (33%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  QLEHRDEYPTEIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDTFLPRMALGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+G K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 SSKGVKDGDEYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL   +        L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDDLRIPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|297565898|ref|YP_003684870.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296850347|gb|ADH63362.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 533

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 119/543 (21%), Positives = 216/543 (39%), Gaps = 56/543 (10%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N +  D  L  ++ +F        ++L   G        +    +   + P L  +  
Sbjct: 9   GSNHFDLDPDLWPVLQHFWPQADTWREDLRRFGVLAGGAAYRVADHVDRESRPLLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+    PA  ALL       ++ S +        +  +     A+ YL+A     
Sbjct: 69  DGNRIDRARLSPAQEALLGELAA--VNASPY--------QGGSWHHHFAQGYLLADPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +      +           W   + + E                   +TE +GG+
Sbjct: 119 CILTITNCVIYAIHKYAPE--FSVWKENLLAGEAWG-------------ATWMTEVQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A  ++ +     ++ L G K+F S   ++D  ++ A+ EG       +  FLVPRL 
Sbjct: 164 DLGANLTRARMDG-EVWRLEGDKYFSSGAGITDYAVVSARPEGAPVGPKGLALFLVPRLD 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N    +RLK K+  R+  + E+E +NT  +L+G          ++  L  L +A 
Sbjct: 223 RAGHLN-YRVRRLKEKLATRAVPSGEVELANTEAYLVGKAEEGIYYTLEVLTLSRLANAA 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +  EA+   +RR   G  L   P+++R + D+A+ IA   AL+FR   +++ 
Sbjct: 282 GAMGLARKAQLEALTRTKRRTAFGKTLDAHPLIRRDLTDLAVRIAGGLALTFRAVQAWEG 341

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       S    YAR +  + K    +   +    AME  GG G++E+ +IAR  RE+ 
Sbjct: 342 AWSERPPYSSRYHYARFLTHLAKARTAEHGTSCTQLAMELFGGVGFVEDFAIARLAREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVITILRDSISLC- 494
              I  G  N   LD L ++ +   L     +    LE+    S +  +  L  +++   
Sbjct: 402 ITPIWEGPANVQALDTLEVMFRKGALEPFLGEFVPALERVGTPSSRIALEALEKTLARLR 461

Query: 495 ----KEDKGLARFLTEKIALASSAAALYRAGMND------IADVFLENRFLDNCHSTHCM 544
               +E + LA+     +A  +  A LY            +A+++  +RFL     +   
Sbjct: 462 QAEPEEAQWLAKESLRTLADVAITALLYGLAGTSGERYVKLAELY-ASRFLKGEEYSSWA 520

Query: 545 LHG 547
           L  
Sbjct: 521 LSA 523


>gi|119475493|ref|ZP_01615846.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451696|gb|EAW32929.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 383

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 131/389 (33%), Gaps = 37/389 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A   +P    +       DK+     W+ +       G  C      +            
Sbjct: 22  AEEISPHFEQW-----EKDKIIPRDIWNKI----GDAGFLCVDTPEQYGGFGAHFIFSAT 72

Query: 137 AARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
               +  A     A ++   S   A  +    T      + PK+ S EY           
Sbjct: 73  IEEEFSRAGCASIASNISVHSDIVAPYLINHGTEEQKNKYLPKMVSGEY----------- 121

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRV 253
                + +TE   G+D+  I +  +K  +  Y ++G K F+++     F++ A +    V
Sbjct: 122 --VGAIAMTEPGAGSDLQGIRTTAKKDGEN-YIINGSKTFITNGQHCDFVITATKTNTEV 178

Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            G       + D +  G    R  +KIG  S  T EL F       G LLG L+     +
Sbjct: 179 SGSKGTSLFIVDTNNTGFSRGRNLDKIGQHSADTSELFFEQVSVSSGALLGQLDCGFAVL 238

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +      L  +I +++     L   I Y   R      +      +  +A++  +    
Sbjct: 239 MNELPRERLILSIGAIAACEGILDWTIEYTSERKAFSQTISSFQNTRFRVAEMTTETRVN 298

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            +      + + + +  +  A+ A++          ++   V+   ++  GG GY+ E  
Sbjct: 299 RSFVNECIDLYSKGELDTATASMAKLST-------TELQGRVVDGCLQLFGGYGYMVEYP 351

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I R + ++    I  G+   M   V   +
Sbjct: 352 IGRAFVDARIQRIYGGTSEIMKEIVSRSI 380


>gi|302541639|ref|ZP_07293981.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459257|gb|EFL22350.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 400

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 122/378 (32%), Gaps = 35/378 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTRIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + PK+   E                   ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDYFLPKMALGEIRG-------------AFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP--- 267
           TS+     D         W  +   S    +L +     EG      +   L +  P   
Sbjct: 142 TSKAVPDGDEYMLNGQKMWLTNGGTSTLVAVLCRTGDQQEGVPPHKSMTTFLVEKEPGFG 201

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL       K+G +   T EL            L G  N     + D   +  ++ 
Sbjct: 202 EVRPGLTIPGKIEKMGYKGVDTTELIMDGLRIPADRVLGGTTNRGFYQMMDGVEVGRVNV 261

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A       + +    + YA++RH  G  +     ++  +A++   + AA A+    A   
Sbjct: 262 AARGCGVAQRAFELGVAYAQQRHTFGKPIAQHQAIQFKLAEMGTKVEAAHAMMVNAARKK 321

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P  
Sbjct: 322 DAGARNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPML 374

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+     + +   L
Sbjct: 375 LIGEGTAEIQKMIIGRRL 392


>gi|307596569|ref|YP_003902886.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307551770|gb|ADN51835.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 409

 Score =  244 bits (622), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 132/364 (36%), Gaps = 27/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L++    GL     D S           +               +   +      + 
Sbjct: 49  REILKKLGEQGLWGIGIDESLGGQGGDTVSAVILMEELSRVAPPLAVIRGTNDLFIIPLL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L     + + + P             P+ +        +TE   G+D+A I ++  K  D
Sbjct: 109 LFGNEELKRKYIP-------------PIARGEAFGAHAMTEPCCGSDVAGIQTRAVKKGD 155

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + +SG K F+S+   +D  ++ A+    +     F +   + +    GL       K 
Sbjct: 156 -RWVISGRKIFISNADIADYIMVFARTSEPQPNRRWFGITAFIVEKGTPGLKIGAKFEKR 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R +  +E+   +        +  V  G +  M+      +  A  ++   + +  +A 
Sbjct: 215 GLRGSHAMEVILDDVEVSDENRVGEVGMGFIIAMETYDRTRVGVAAQALGMAQAAFEKAF 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R   G  L     ++ ++A++  ++  A  L +  A+  D+ +   +       +
Sbjct: 275 QYSLQRTAFGQYLASFEAIQFSLAEMMAELMTARYLVYLAAHLADQGREEFK------YV 328

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K++  + A  +I++A++  GG G I E  I R  R+     I  G+ N   L    
Sbjct: 329 ASLAKFYATETAERIISKAIDIHGGVGVIHETGIERFLRDVKITEIYEGANNIQRLVAFR 388

Query: 457 LLEK 460
            L +
Sbjct: 389 QLIR 392


>gi|183220511|ref|YP_001838507.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910620|ref|YP_001962175.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775296|gb|ABZ93597.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778933|gb|ABZ97231.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 524

 Score =  244 bits (622), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 141/394 (35%), Gaps = 33/394 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-- 153
           ++     W    +     GL        +            A   +    L+ G  +S  
Sbjct: 40  EIWSDELWKEFSK----AGLTGLTIPTEYGGEGASCLLCSIATDAFASGSLDGGIGLSWV 95

Query: 154 -PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              V     +    T      +  K+ + E+               G  LTE   G+D A
Sbjct: 96  AHLVIGTMPIVFQGTESQKTKYLTKLATGEWM-------------AGFALTEPASGSDAA 142

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
           ++ ++ +++  G        +  + P+   FI++A+  E   G   +   + +    G  
Sbjct: 143 SLLTKAEEVEGGWKLNGSKTFITNGPVGQVFIVMARTSEKGRGPMGISAFIVESDTPGFK 202

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS-TGPVEDMKILIYLDSAIMSVSG 327
             ++  K+G+ ++ T EL F +       LLG LN       ++                
Sbjct: 203 VSKVLKKLGHHTSMTAELVFEDMIIPKENLLGPLNTGFMRIGKETLEWERTVFVAGLAGA 262

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M   L + + YA  R   G  +     M+  +    + I AA  L + +A   D+     
Sbjct: 263 MEFCLRKGLRYANERVQFGKPISSFYGMRDILVRNWVYIQAARRLIYWVAERKDKGIPSP 322

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E++  +++         ++A  V  + ++  GG GY++E ++ R YR+    +I  G+ 
Sbjct: 323 LESSLGKLI-------SSELAEDVAKDTVQLFGGYGYMKEYAVERFYRDVKLGTIGGGTS 375

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
                 +++ L  G   F++ F  +E    +S K
Sbjct: 376 EIQR-SIISSLYPGKEKFQKEFKRIESPSNTSDK 408


>gi|284163450|ref|YP_003401729.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013105|gb|ADB59056.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 645

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 126/567 (22%), Positives = 215/567 (37%), Gaps = 91/567 (16%)

Query: 33  GMNAYSSDSLLVALIANFP-----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           G+N +  D  L   +               L   G  V+  T  + A   + + P+L  Y
Sbjct: 15  GVNYWDLDRPLERELRRLYTNEEFEWAEPRLAEFGA-VVGRTIADNADYVDDHGPELEPY 73

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQL 146
              GE W++V +        R +   G+    ++   +       AH +  A  YL++  
Sbjct: 74  DAHGEVWNRVRYPAEQFENDRLAYERGIVADAFEAPLDRDEPMPLAHTL--AMQYLLSYA 131

Query: 147 EAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           + G     ++T+ + + L         ++   + SREYD   +  M          LTEK
Sbjct: 132 DVGFDCPVAMTAGAALVLEKFDDGSLAEYYEALTSREYDDLIEGAMF---------LTEK 182

Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGCFLV 258
           +GG+D+ A  ++ +   + G + LSG KWF S+  ++  + LA+          +  FLV
Sbjct: 183 QGGSDVGANETRAEYDPESGYWRLSGEKWFCSNVDAEGTLALARTPDAPEGTAGLSMFLV 242

Query: 259 PR------------------LLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF 295
           P                    LEDG            +RLK+K+G  +  T E+EF+   
Sbjct: 243 PHSDPDSDARPADGPYTKGDRLEDGPLEPEAVNDQLYRRLKDKLGTTAVPTGEVEFTGAK 302

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
            FL+G+       + +M  L  L +A  +   M  +  E+  YA  R   G  +   P+M
Sbjct: 303 AFLVGEEEKGFTQMTEMLNLERLSNAAAACGLMGRATLESAIYAANREAFGDTIDRYPLM 362

Query: 356 KRAIADIALDIAAATALSFRLANSFDE-------------------------AKSRSEEA 390
           +  + D+ +   AATA +F  A    E                          +S  E  
Sbjct: 363 RADLVDMTVAHEAATAFTFEAARLLSERERAERSARSDDAASADGDAASTTADESADEAY 422

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              R++ PI K    +MA    + AME  GG+GY+ +    R  R++    I  G+ N +
Sbjct: 423 RLMRLLTPIAKLRTGRMAVDTASYAMEIHGGNGYVNDFVTNRLLRDAQVLPIWEGTENVL 482

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS----------------LC 494
            LDVL  LE+  +  E L  T+E  L +     +    +++                   
Sbjct: 483 SLDVLRALERE-DAHEPLLETIEDRLETVSHPALADAAETVESEYEELAAALATLATEDG 541

Query: 495 KEDKGLARFLTEKIALASSAAALYRAG 521
           +  +  A+ L   +    +AA L    
Sbjct: 542 EYAQLSAKCLAHYVFDIFTAALLLEQA 568


>gi|260905531|ref|ZP_05913853.1| fatty acid CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 390

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/371 (19%), Positives = 137/371 (36%), Gaps = 33/371 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTS 158
           H   + L+ +    GL    +D  +  +     A  +    +  + Q  A  L +     
Sbjct: 39  HEFPYDLVAKMGEMGLFGLPFDEEYGGMGGDYFALTLAIEEIARVNQSLAITLEAGVSLG 98

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    T    K+W PK+                S     GLTE   G+D     ++ 
Sbjct: 99  AMPIYRFGTEEQKKEWLPKLT-------------DASGLGAFGLTEPEAGSDAGGTRTKA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGCFL-----VPRLLEDGSPNGL 270
                G + ++G K F+++  +D   ++   A    R          +  ++      G 
Sbjct: 146 TLEG-GTWTINGSKCFITNSGTDITRLVTATAVTGTRTSKSGREVPEISTIMIPTGTPGF 204

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
             +   +K+G  S+ T  L F N        L     G    ++IL    +    +SV  
Sbjct: 205 TAEPAYDKVGWNSSDTHPLTFDNVQVPEANLLGERGRGYANFLRILDEGRIAVGALSVGA 264

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  + E++ YA+ R   G  + D   +   IA +   + AA +  +  A+         
Sbjct: 265 AQGCVDESVKYAKERQAFGQPISDFQGISFKIARMEARVVAARSAYYLAASRMLAGLPFK 324

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A+++A        + A     +A +  GG G++ E  +ARHYR+S    +  G+ 
Sbjct: 325 KEAAIAKMVAG-------EAAMDNARDATQIHGGYGFMNEYLVARHYRDSKILEVGEGTT 377

Query: 448 NAMVLDVLNLL 458
              ++ +   L
Sbjct: 378 EVQLMLIAREL 388


>gi|167648444|ref|YP_001686107.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167350874|gb|ABZ73609.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 581

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 91/513 (17%), Positives = 180/513 (35%), Gaps = 61/513 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDGLH 116
             ++    +     A+     L      G+          V   P + A  +     G +
Sbjct: 32  ADIVDAVLEAAGVFASE---VLAPINRAGDLVGAKLENGVVRTAPGFAAAYKAFAQAGWN 88

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
               D         +A +I    +   A +  G     ++ ++  +A   + R    + P
Sbjct: 89  SLAADPEHGGQGLPKALEIAVFEMVHAANMAFGLCPMLTLGASEALASHGSDRQKALYLP 148

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++ S E+                + LTE + G+D+AA+T+       G Y L+G K F++
Sbjct: 149 RMVSGEW-------------TGAMNLTEPQAGSDLAALTTTATPDGAGGYTLNGQKIFIT 195

Query: 237 SPMSDA-----FIMLAQV-EGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIG 280
               D       ++LA+  +   G   +   L            G  N L    L++K+G
Sbjct: 196 WGDHDVADNVCHLVLARTPDAPPGVKGISLFLAPTVLVGDDGALGEANALRVGSLEHKLG 255

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              + T  + +      L+G+L      +  M     L      V+    +  +A+ ++ 
Sbjct: 256 IHGSPTCVMLYEGAKAELVGELGKGLAHMFTMMNAARLQVGTQGVAIAERAYQQALDFSL 315

Query: 341 RRHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            R              L D P +++ +  +   I AA  +    A + D ++  + E   
Sbjct: 316 ERAQGRSAWTGAYPARLFDHPDIRKTLLLMKARIEAARGICLSTAVAADLSRHAATEDER 375

Query: 393 A------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           A       ++ PI K W   M   + +  ++  GG G+IEE   A+HYR++  N I  G+
Sbjct: 376 AAAKLREELLTPIAKAWSTDMGVEIASMGVQIHGGMGFIEETGAAQHYRDARINPIYEGA 435

Query: 447 GNAMVLDVLNLL------EKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC-KED 497
                +D++         +   +L + +  TLE  +  G +   +    + ++       
Sbjct: 436 NGIQAIDLIGRKLGLGEGQAIGDLMDDMRDTLERLEAAGDALGGLALRFKAALDAANGAT 495

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             L       +  A S A  Y   + D    ++
Sbjct: 496 AWLIERRARAMPDALSGATAYLKLLGDTVGGWM 528


>gi|319425993|gb|ADV54067.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200]
          Length = 596

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 94/547 (17%), Positives = 200/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    R+ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYRQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++       +  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQLFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYRAGM 522
            + + + S      +   +   +    + +  + +L  + A       A+S A L   G+
Sbjct: 469 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLAAQAATNPDIIGAASMAYLELFGV 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|219119059|ref|XP_002180296.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408553|gb|EEC48487.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 434

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 150/423 (35%), Gaps = 45/423 (10%)

Query: 46  LIANFPSVVHKELELLGEY--VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
              +  + +H  +  L E   ++   A++ A       P +      G            
Sbjct: 42  ATRHAVAPLHAPVTALTEDESMIRDVARQWANDGLR--PVVRKMDREG------------ 87

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLEAGHLMSPSVTSASMV 162
                 S+   +  S++ + F  +     H             +E    + PSV     +
Sbjct: 88  ------SLDPDILSSLFAQGFMGMEIPPEHGGSGLSFTSACLVVEEISRVDPSVAILVDI 141

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W  +     +      P   T       L+E   G+D  A+ +     S
Sbjct: 142 HNTLTNNAIRFWGSESLRNTW-----LPRLATDTVSSFCLSEAESGSDAFALKTTAIPTS 196

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y L+G K W  ++  +  F++ A      G   +   + D    G+     ++K+G 
Sbjct: 197 SSEYVLNGTKLWISNAAQAGVFLVFANANPAAGYKGITAFMVDAKTEGISVGPPESKLGL 256

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI---- 336
           R+++T  + F +        L  V  G    + I   L+   + ++  ++ +A+      
Sbjct: 257 RASSTCPITFDDVKVTTDDILGQVGMGYKYCINI---LNEGRIGIACQQIGIAKGCLDIV 313

Query: 337 -HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y + R   G  + D   ++  +A  A ++ AA  +++      +      +EA+ A  
Sbjct: 314 MPYLKERQQFGRAIADFQGVQFQVAMAATELHAAEVMTYNACRLKEANLPFVKEASMA-- 371

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  K++  V +  +E +GG G+ ++    + YR+    SI  G+ N  +  + 
Sbjct: 372 -----KLYSSKVSEKVASLTIELLGGIGFTQDLLAEKFYRDCKVGSIYEGTSNMQLQTIA 426

Query: 456 NLL 458
            LL
Sbjct: 427 KLL 429


>gi|300789736|ref|YP_003770027.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799250|gb|ADJ49625.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 384

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 136/376 (36%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AG 149
           GE ++K EF    +A++ +    GL    +   F  +         A           A 
Sbjct: 30  GELYEKEEFP---YAIVAKMGEMGLFGLPFPEEFGGMGGDYFALCLALEELARVDSSVAI 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  +    T    ++W P +              + +   G GLTE  GG+
Sbjct: 87  TLEAGVSLGAMPIYRFGTQEQKQEWLPSLC-------------EGTALGGFGLTEPGGGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEG--RVGCFLVPRLLEDG 265
           D  A  ++     D     +G K F+++  +D   F+    V      G   +  +L   
Sbjct: 134 DAGATRTRASLDGDEWVV-NGSKAFITNSGTDITRFVTATAVTDVMENGRKEISAILIPS 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAI 322
              G       +K+G   + T EL FS+    +   + V   G  + + IL    +  A 
Sbjct: 193 GTPGFAVAPKYSKVGWNCSDTHELSFSDVRVPVENLIGVRGRGYAQFLSILDEGRVAIAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +SV   +  + E + Y + R   G  + +   ++  IAD+ +    A    ++ A+    
Sbjct: 253 LSVGLAQGCVDECLKYVKDRVAFGKRIGEYQAIQFKIADMEVRTHTARLAYYQAASKMLR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +E       A I K      A     +A +  GG G++ E  ++R YR++    I
Sbjct: 313 GEPFKKE-------ASIAKLVASNAAMDNARDATQIFGGYGFMNEFPVSRFYRDAKILEI 365

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     + +   L
Sbjct: 366 GEGTSEVQKMLISRHL 381


>gi|297196619|ref|ZP_06914017.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153309|gb|EFH32283.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 381

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 137/386 (35%), Gaps = 33/386 (8%)

Query: 89  PGGERW--DKVEFHP----AWHALLRRSIHDGLHCSIWDRSFEPVVRK---QAHKIRAAR 139
             GE    D +E       +W    +     G+    ++     + +      + +    
Sbjct: 17  RWGEALSADHIELDEQATFSWDK-WKLIQKTGILALPFEEEHGGLGQSLLTTMYVLEGLG 75

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +         + +   ++   +    TP   + + P I S E                 
Sbjct: 76  EHCQDAGLNFSVTTTLASTGIPLTRFGTPEQKERYLPLISSGE-------------AIGA 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             +TE  GG+D  A+T++ ++  D         +  + P++D F++ A+     G   V 
Sbjct: 123 HAITESEGGSDAMAMTTRAERDGDHFVLNGSKTFVSNGPVADVFVVYARTRPDGGALGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             L D    GL   +   K+G R++   EL F +       +LG +      ++ +    
Sbjct: 183 AFLVDRDTPGLTVGKPIKKMGLRTSPLSELYFDDCRIPRTRVLGRVGGGFIVLDHVMKRE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L S +++   M+  L   + YA+ R   G  +     +   I D  + +  A    +  
Sbjct: 243 VLFSFVVNAGEMQHRLDRCLEYAKTRRSFGKPIGSHQSIANKIVDTKIGLETARKWLYDT 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+ ++ + + A A+++                  A++  GG GY+ E  + +  R 
Sbjct: 303 AQRLDDGENVTIDLAIAKLLTSQANVASS-------LAAVQIFGGHGYMSEYGLEQGVRN 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGT 462
           +   +I  G+       + ++L  GT
Sbjct: 356 AVGGTIYSGTNEIQYNRIASMLGLGT 381


>gi|90417198|ref|ZP_01225125.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [marine gamma proteobacterium HTCC2207]
 gi|90330974|gb|EAS46235.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [marine gamma proteobacterium HTCC2207]
          Length = 599

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/530 (17%), Positives = 187/530 (35%), Gaps = 70/530 (13%)

Query: 48  ANFPSVVHKELELLGEYV---LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
            ++     + L+ + +             A   + N PQ            KVE  P   
Sbjct: 27  EHYADYDRESLDAMLDLCQTIAEDQFLSCASKLDANEPQFVD--------GKVETIPELK 78

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +      GL  S +D     +            +++ A   A   +  +   A+M+  
Sbjct: 79  EAIAAYQEAGLCASAYDADVGGLQLPWMADQALNGMFVCANNPAHIYLFLTQGVANMLNA 138

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  +   + P +   ++  T             + L+E + G+ +A I ++ +   DG
Sbjct: 139 CGSDELKSKYLPNLVDGKWFGT-------------MCLSEPQAGSSLADIRTKAEPKPDG 185

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLEDGSP----------N 268
            Y L+G K ++S    D       ++LA++ G   G   +   L   +           N
Sbjct: 186 SYALTGTKMWISGGEQDITENIVHMVLAKIPGSPPGVKGISLFLVPKNRVNDDGTIGEYN 245

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    L +K+G R      L F  +    G+L+G+ N     +  M     +   + +V
Sbjct: 246 NIALAGLNHKMGCRGATNCLLNFGESGESIGYLVGEPNQGLANMFHMMNEARISVGMSAV 305

Query: 326 SGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALS 373
                    ++ YAR R   G              + +   +KR +      I  A  L 
Sbjct: 306 MSALGGYLYSLDYARNRPQ-GRPLVNRNPEDPQIMISEHADIKRMLMTQKAFIEGAQTLM 364

Query: 374 FRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +  A   D  K  ++  A         ++ PI K W  +        A++ +GG GY  E
Sbjct: 365 YYCAELIDTKKLSTDLEANQRRDLLLDLLTPICKSWPSEFCLEANKLAIQILGGYGYTRE 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN---LFEQLFSTLEQDLGSSG- 480
             + R YR++  N I  G+     +D+L     ++ G     L E++ +T++   G +G 
Sbjct: 425 YPVERLYRDNRLNHIHEGTWGIQGIDILGRKVRMQNGAAVKILREEMQATIDSAAGHAGL 484

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
                 L + + L ++   +     E  +LA + A ++   M  +   ++
Sbjct: 485 SSFCDQLNEYLVLIEDTISVVEQ-AEDPSLALANATIFLDAMGHLVIAWM 533


>gi|169628168|ref|YP_001701817.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240135|emb|CAM61163.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 385

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 139/374 (37%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L R++   GL       +           +        A +  
Sbjct: 29  PNVNEWEREGLLP--RELHRKAGDLGLLGPGSPEAVGGGGGDAIDPVIVCEELHYAGV-- 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                  V ++     ++TP +      ++      PT         +   L +TE  GG
Sbjct: 85  ----PGGVFASLFTCGISTPHMIASGDQRLIDNYVKPTL-----AGELIGSLAITEPGGG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  +T+  ++  D  Y ++G K F++S +   +++ A   G  G   V  LL D    
Sbjct: 136 SDVGHLTTSAKRDGDH-YIVNGAKTFITSGVRADYVVTAVRTGGPGAAGVSLLLIDKDTP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G RS+ T EL F++       L+G  N     +    +   +  A  + 
Sbjct: 195 GFEVARKLDKMGWRSSDTAELSFTDVRVPAENLVGSENTGFAQIAGAFVSERIGLAAQAY 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  +  L   + + R R   G  LI +  ++  +A++A  I  A   +  L +     +S
Sbjct: 255 ASAQRCLDLTVEWCRNRETFGRPLISRQSVQNTLAEMARRIDVARVYTHALVDRAIAGES 314

Query: 386 RS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  +A+  A     W       V  + ++  GG GY+ E  I R YR+     I  
Sbjct: 315 NLIAEVCFAKNTAVEAGEW-------VANQGVQLFGGMGYMAESEIERQYRDMRIIGIGG 367

Query: 445 GSGNAMVLDVLNLL 458
           G+   +      LL
Sbjct: 368 GTTEILTSLAAKLL 381


>gi|45659102|ref|YP_003188.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602348|gb|AAS71825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 534

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 29/367 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D    +  W  +       GL        +            A   +    L++G  
Sbjct: 34  RDEDCTWDNELWKEMGSI----GLLGIPIPEEYGGQGGNCFQCCLAQEAFNAGSLDSGFG 89

Query: 152 MS---PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +S     +  +  +    T      + PK+ + E+               GLGLTE   G
Sbjct: 90  LSWGAHMIIGSLPILFQGTEIQKNKYLPKLVNGEW-------------IAGLGLTEPDSG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + +  +K  DG        +  + P+   FI++A+     G   +   + +    
Sbjct: 137 SDAAGMRTYAEKTKDGFVLNGSKTFITNGPIGQVFIIMARTTKSRGPMGISAFIVESKNK 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSV- 325
           G    ++  K+G+ ++ T EL F + +      L              L +  + +++  
Sbjct: 197 GFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLHSGFLRIGKATLEWERTVLLAAL 256

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             GM   L   I Y+ +R   G  +++   +K  IA I + + AA  +++ +A   D   
Sbjct: 257 MGGMENILENCIRYSWQRQQFGKSILNFFAIKEKIARIWVYLCAARRMTYFVARKKDFEP 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + S       + + I K +  +++  V ++A++  GG GY+ E S++R YR+    +I  
Sbjct: 317 NVS-----LPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVSRFYRDVKLGTIGG 371

Query: 445 GSGNAMV 451
           G+     
Sbjct: 372 GTSEIQR 378


>gi|321462443|gb|EFX73466.1| hypothetical protein DAPPUDRAFT_188892 [Daphnia pulex]
          Length = 277

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 13/274 (4%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV- 249
           M +  +    G+TE   G+D+AAI ++ +K  D         W  ++  ++ + +LA+  
Sbjct: 1   MVEEPLICAYGVTEPGAGSDVAAIKTKAEKKGDHYVLNGQKMWITNAGHANWYFVLARTN 60

Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVST 306
                     +   + D    GL   R +  +G R++ T  + F +        L    T
Sbjct: 61  LDPKAPAHKALTGFIVDRDTPGLTPGRKEINMGQRASDTRGITFEDVLVPKENVLIGEGT 120

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M          A  +V   + +L EA  YA  R   G  +    ++   +A++A+
Sbjct: 121 GFEIAMGAFDRTRPTVASGAVGLAQRALDEATKYALERSTFGVPIAKHQLVMNMLAEMAM 180

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I +A  +  R +   D+ +  +         A I K     +A     +A++  GG+GY
Sbjct: 181 SIESARLVWMRASWETDQGRRNT-------YYASIAKAMAADVANKCATDAVQIFGGNGY 233

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + +  R++    I  G+     L +   L
Sbjct: 234 NTDYPVEKLMRDAKIYQIYEGTAQIQRLIIAREL 267


>gi|308502792|ref|XP_003113580.1| CRE-ACDH-12 protein [Caenorhabditis remanei]
 gi|308263539|gb|EFP07492.1| CRE-ACDH-12 protein [Caenorhabditis remanei]
          Length = 629

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/472 (16%), Positives = 166/472 (35%), Gaps = 57/472 (12%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      A+L +    G    +     E      +   R A +     L  G +M    +
Sbjct: 94  ETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQS 153

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                + L  T    + + P + +                     LTE   G+D +++ +
Sbjct: 154 IGYKGILLEGTDAQKQKYLPDLATG-------------RKFAAFALTEPTTGSDASSVRT 200

Query: 217 QGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNG 269
           + +  +DG       G  W  +   +D F + AQ      +G     +    + + +  G
Sbjct: 201 RAELSADGKHYVLNGGKIWISNGGFADVFTVFAQTPVKLADGSTKDKM-SAFIVERAFGG 259

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV--- 325
           +     + K+G + + T E+ F N    +    N+     E  K+ +  L++    +   
Sbjct: 260 VTSGPQEKKMGIKGSNTTEVHFDNVKIPV---ENLLGKEGEGFKVAMNILNNGRFGIPAA 316

Query: 326 --SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
               M+  + + + +   R   G  L +   ++  + ++   + A  ++ + L+++ D  
Sbjct: 317 CTGAMKHCIQKTVDHITTRVQFGKKLQEFGNVQEKLVEMISKLYATESIVYMLSSNMDRG 376

Query: 384 -KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    EAA  +++A        + A  V  +A++  GG G++ E  + R  R+     I
Sbjct: 377 IKEYQLEAAIGKVLA-------SENAWHVCDDAIQVHGGMGFMRETGLERVLRDLRIFRI 429

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQL--------FSTLEQDLGSSGKKVITILRDSIS 492
             G+ + + L +        G +L EQ          +      G++G     ++  S+ 
Sbjct: 430 FEGANDVLRLFIALTGAQHAGKHLAEQASGVGGLIGLAVSRVTGGNTGSNFGQVVDSSLQ 489

Query: 493 LCKEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTH 542
                   A+ L ++IAL        L +     I   +  +R  +     +
Sbjct: 490 DS------AKALDQQIALFGQTVQGLLMKHKKGIIDRQYEMHRVANAAIDIY 535


>gi|296140521|ref|YP_003647764.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028655|gb|ADG79425.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 391

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 130/362 (35%), Gaps = 21/362 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             L R++   GL    +  +        + A  +  A             +     S   
Sbjct: 41  RDLHRKAGELGLLGVSFPEAVGGGGGDPRDALVVCEAMHEAGGSGGLFASLFTCGISVPH 100

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T      W              AP+        L +TE  GG+D+  +T+  +K 
Sbjct: 101 IILAGTDEQKAKWV-------------APVLAGEKISSLAITEPGGGSDVGHLTTTARKD 147

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D  Y ++G K F++S +   +++ A   G  G   +  L+      G        K+G 
Sbjct: 148 GDH-YIVNGAKTFITSGVRADWVVTAVRTGGEGAAGISLLVIPKGLPGFEVSAPLKKLGW 206

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T EL F++       L+G        +    +   L  A+ + S  +  L   + +
Sbjct: 207 HASDTAELSFTDVRVPAENLIGPEGSGFLLIGAAFVTERLGLAVQAYSHAQRCLDLTLDW 266

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYARIM 396
            R+R   G  LI +  ++  + ++   I  A   S  +A+ +  A        AA     
Sbjct: 267 VRQRETFGEPLIKRQAVQNTVTEMRRRIEVARVYSRHVADLYTAALESGGPAAAAELVPQ 326

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K    +    V  EA++  GG GY+ E  ++RHYR+     I  G+   +     N
Sbjct: 327 ACFAKNTAVECGEWVANEAVQLFGGHGYMSEYEVSRHYRDVRILGIGGGTTQILTTLAAN 386

Query: 457 LL 458
            L
Sbjct: 387 RL 388


>gi|311743587|ref|ZP_07717393.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312717|gb|EFQ82628.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 396

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 125/365 (34%), Gaps = 32/365 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+   +    F  +                  +    +++     A ++    T    
Sbjct: 52  ELGIFGLMIPEEFGGLGESLLTYALVVEEIARGWMSVSGVINTHFIVAYLLMHHGTDEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ + E             V     ++E   G+D+AAI+++  K  DG       
Sbjct: 112 QKYLPKMATGE-------------VRGAFSMSEPSLGSDVAAISTKAVKNDDGYEITGQK 158

Query: 232 KWFLSSPMSDAFIMLAQVE-GRVGC-FLVPRLLEDGSPN------GLCYQRLKNKIGNRS 283
            W  +   S    +L + + G       +   L +  P       G+      +K+G + 
Sbjct: 159 MWLTNGGSSTLVAVLVKTDEGDDSVYRNMTTFLVEKDPGFGETAQGVTVPGKIDKMGYKG 218

Query: 284 NATVELEFS----NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T E+ F     +    L G        + D   +  ++    +V     +    I YA
Sbjct: 219 IDTTEMIFEKHQISADQILGGKPGQGFYQMMDGVEVGRVNVGARAVGIANRAFELGIAYA 278

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           ++R   G  +     +   +A++A  +  A A+  + A   D  K    EA  A+++A  
Sbjct: 279 QQRETFGKPIAQHQAILFRLAEMATKVETAHAMVVKAARLKDAGKRNDVEAGMAKMLA-- 336

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 +    V+  +    GG GY +E  I R YRES    I  G+ +   + +   L 
Sbjct: 337 -----SEYCNEVVEASFRIHGGYGYSKEYEIERLYRESAFMLIGEGTSDIQKMIIGRALL 391

Query: 460 KGTNL 464
           K   L
Sbjct: 392 KDYKL 396


>gi|197105827|ref|YP_002131204.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479247|gb|ACG78775.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 374

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 133/358 (37%), Gaps = 22/358 (6%)

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR------ 169
           H + W+ +        A       L + A  + G   +  V+ A  +  +          
Sbjct: 24  HSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAGADYVSYALSLMELAAADGALSTI 83

Query: 170 ------VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 +      K  S E        +          LTE   G+D AA+ ++  ++  
Sbjct: 84  VSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAFALTEADAGSDAAAVRTRATRVPG 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G       ++  S  ++   I+ A  +   G   +   L      G    ++++K+G  +
Sbjct: 144 GYRLNGAKQFITSGKIAKLAIVFAVTDPDAGKRGLSAFLVPTDRPGYAVDKVEHKLGQGA 203

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  L F + F      L     G    +  L    +  A  SV   + +L  A+ YAR
Sbjct: 204 SDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGRIGIAAQSVGMAQAALDIAVGYAR 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +I+   +   +AD+A  + AA  L    A   D  +        A   A + 
Sbjct: 264 QRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAAALKDAGEP-------ALRQASMA 316

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A AV++ A++ +GG GY+EE  +A+ YR+     I  G+ +   L +   L
Sbjct: 317 KLFASETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTSDIQRLVICRGL 374


>gi|220915509|ref|YP_002490813.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953363|gb|ACL63747.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 591

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 88/511 (17%), Positives = 180/511 (35%), Gaps = 48/511 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL-----------LRRSI 111
           EY++S   ++        T +        E++ + E  PA HAL           +R++ 
Sbjct: 9   EYLISEATKDDVFTPEDFTEEQRQIAETAEQFAESEALPAEHALEQHEPGVAAALMRKAG 68

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL       ++  +   +A  + AA         +    + +      +    T    
Sbjct: 69  DAGLLMIDAPEAYGGLALDKATSMLAAERMGTGGAFSVSYAAHTGIGTLPLVYYGTDAQK 128

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
             +  K+ + E+             A    LTE   G+D     +      DG  Y L G
Sbjct: 129 DRYLTKLVTGEW-------------AAAYCLTEPEAGSDAMGGKATATLSPDGKHYLLDG 175

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++   ++ F + A+V+           L + +  G+     + K+G + ++T  +
Sbjct: 176 TKQFITNGSFANLFTVFAKVD----RKHFTAFLVERTFPGVTVGPEEKKLGIKGSSTTSV 231

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +    +   LG++        ++  +             +++LA    YA  R   G
Sbjct: 232 IFESAKVPVENVLGEIGKGHKIAFNVLNVGRFKLGAAVTGAAKLALATGAAYANARKQFG 291

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSEEAAYAR 394
             +     ++  +AD A  + A+ +L +RLA   D+             ++  +      
Sbjct: 292 TPIARFGAIREKLADQAAAVYASESLIYRLAGLIDDRLATIPADQPGYYEAYQQGIEEYA 351

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I   I K +C ++   V+ E ++  GG G+I+E    ++YR+   N I  G+     L V
Sbjct: 352 IECAIAKVFCSEVLADVVDEVVQIHGGYGFIQEYPAEKYYRDERINRIFEGTNEINRLLV 411

Query: 455 LN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
              +L +       L   + + + +     +     ++    E   +A      + +A +
Sbjct: 412 PGTILRRALKGELPLQREVMKAMDALMNPSLDEADPAVPFAAEKATVANLKRAFLVVAGA 471

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           A   Y   + D  +V L     D        
Sbjct: 472 AVQKYGEALKDEQEVLLA--LADVAIQAFAA 500


>gi|84494342|ref|ZP_00993461.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84383835|gb|EAP99715.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 384

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 134/357 (37%), Gaps = 28/357 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +   G         F          + + A  L       +      +  +A  +  M T
Sbjct: 46  AGKQGFFGLTIPEEFGGAGIDDYRFNAVLAEELAKFNVAVSSCFGIHADITAPYLVAMGT 105

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-- 225
                 W P++ + E               + +G+TE  GG+D+AA+ S   K  DG   
Sbjct: 106 QEQKARWLPQVATGE-------------TIMSIGMTEPSGGSDLAALKSNAVKADDGSGD 152

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+++    D  ++ A+ +   G   +   + + +  G    +  +K+G   +
Sbjct: 153 WILNGSKTFITNGYQCDLAVVAARTDPTKGAKGISLFVLEATDEGFSKGKPLDKVGQPES 212

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F N       LLG   +    +        L +AI  ++     L E I YA+ 
Sbjct: 213 DTSELFFENVRLPADRLLGPEGMGFITMMQKLPQERLGNAIGCIAHAGQILEETIEYAKE 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      K  IA++   I  A A       +  E K  + +AA A+  A    
Sbjct: 273 RKAFGQPIGSFQHNKFKIAELVTMIEVAQAYIDDCVVAHAEGKLTAVDAAKAKWWAA--- 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +    V+ E ++  GG GY+ E  +AR +R++  N I  G+   M   +   L
Sbjct: 330 ----ETQSKVLDECVQLHGGYGYMNEYRVARAWRDARINKIWAGTNEIMKELIGRDL 382


>gi|227828676|ref|YP_002830456.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227460472|gb|ACP39158.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
          Length = 400

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRISVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A + +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPAAGSDVAGMQTVAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  A+ FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAASLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|167566829|ref|ZP_02359745.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
          Length = 390

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 138/378 (36%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    L  ++   GL    +  ++  V            + L      
Sbjct: 32  PYVNDWDEAGEFP--RELYEKAARIGLIGIGFPDAYGGVEDVDMFHRLICSIELARCGAG 89

Query: 149 GHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G + S    +  A  +    +  +     P I +                   L +TE  
Sbjct: 90  GVVSSLMSHTIGAPPIVHAGSDELKARVLPGILAG-------------RKISALAITEPG 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLED 264
           GG+D+AA+ ++  +   G Y ++G K F++S + +D + +  + +    G   +  LL +
Sbjct: 137 GGSDVAALRTRAVRDG-GHYVVNGEKVFITSGIRADYYTVAVRTDPSAQGAKGLSLLLVE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
           G   GL    L+ K+G  ++ T  L F +       L+G        V     L     A
Sbjct: 196 GDTPGLSKTPLE-KMGWWASDTAHLRFDDCRVPAANLIGAEGGGFPLVMQNFNLERFSLA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++    V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A   + A   D
Sbjct: 255 ASALGFAEVCYEDALDWARQRRTFGQRIADHQVIRHKLVDMAMRIDATRAWLEQCAWQID 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R   A        + K +  +        A++ +GG GY+      R YRE   N 
Sbjct: 315 HLDKR---APTLVASICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREVKVNM 371

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+   M       LE
Sbjct: 372 IGGGAEEIMKDLAARQLE 389


>gi|317131264|ref|YP_004090578.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
 gi|315469243|gb|ADU25847.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
          Length = 378

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 142/372 (38%), Gaps = 34/372 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E  P    LL      G   +    ++  +    +       +        
Sbjct: 25  PFAAFVDQQEAIPE--QLLANIKRSGYLGATVSPAYGGLGYSNSALFSLNEISGTGCSSF 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     +  +       +   + P + S E                   L+E   G
Sbjct: 83  RSMLTVHGMVSIAIEKWGNDALKNKYLPLLASGE-------------KLASFALSEPDAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+  I +      DG Y L+G  KW     +SD F++ AQV  +        LL D + 
Sbjct: 130 SDLKQIKTAAVYE-DGSYILNGLKKWITFGQISDLFLVFAQVGDKP-----TALLVDRNT 183

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            G   + +K  +G R +   EL F          +      +  +     LD    SV+ 
Sbjct: 184 PGFSIKPIKGLLGARGSMLAELTFEQCRVPADNLVGKEGLGLSHVAQY-CLDYGRFSVAS 242

Query: 328 MRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V LA+A       Y+++R  SG +L   P++++ IA++A++I AA  L  + A   D 
Sbjct: 243 GCVGLAQACLDESIGYSKKRICSGKLLRKHPLIQKKIAEMAVNIEAARLLCQKAAALKDA 302

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +S     A   A   KY+C KM   V +EA++  G +G   E  + R+YR++  N I
Sbjct: 303 GDPQSI---LATWHA---KYFCAKMVVQVASEAVQIHGANGCTNEYPVERYYRDAKINEI 356

Query: 443 LLGSGNAMVLDV 454
           + GS     L +
Sbjct: 357 IEGSNEIHELLI 368


>gi|157375831|ref|YP_001474431.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157318205|gb|ABV37303.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 596

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 89/476 (18%), Positives = 181/476 (38%), Gaps = 55/476 (11%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
              +    ++ + +G      D  +      +A  + A  +     +        +  + 
Sbjct: 75  PKGFKEAYQQYVDNGWGTLTCDPEYGGQGLPEAIGVFATEMKTATNMAFAMYPGLTHGAY 134

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           + +    +  + + +  K+ + E+  T             + LTE   GTD+A + ++  
Sbjct: 135 AAIHAHGSDALKQKYLEKLVTGEWTGT-------------MNLTESHAGTDLALLRTKAI 181

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
           +  +G Y +SG K F+SS   D     A ++LA++         +  F+VP+ L +    
Sbjct: 182 EAGEGQYAISGEKIFISSGDHDLAENIAHLVLARLPDAPAGVKGISLFVVPKFLINEDGS 241

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            G  N LC   L++K+G   N+T  + F    G L+GD +     +  M     L   + 
Sbjct: 242 LGDANTLCATGLEHKMGIHGNSTCVMNFDGALGELVGDPHQGLRAMFTMMNQARLGVGVQ 301

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATA 371
            +    ++   A+ YA+ R    G             ++    ++R +         A A
Sbjct: 302 GLGVSEIAYQNALAYAKDRIQGRGLSGVKAPEMAADPILVHGDVRRMLMSQKSFNEGARA 361

Query: 372 LSFRLANSFDEAKS--RSEEAAYARIMA----PITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  + A   DEA+     E+A  A  +A    PI K +          +A +  GG GYI
Sbjct: 362 MIGQQALWLDEAERHSDPEKAKMANKLAALFTPIVKGFVTDRGFNACVDAQQVFGGHGYI 421

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF---EQLFSTLEQDLGSS 479
            E  + +  R+   + +  G+     LD++    L +K   L      +   +E+++ + 
Sbjct: 422 HEWGMEQFVRDIRISMLYEGTNGVQALDLVGRKILSDKAATLMSWSALVKQLIEENMSND 481

Query: 480 GKK--VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
             K  +  ++  S  L K  + +A    +   +  +A+  Y   +   A  ++  R
Sbjct: 482 AMKPYLAGLMDASKDLEKSTQYVAMNAPKNSDILGAASMPYMQILGITALAWMWTR 537


>gi|256395892|ref|YP_003117456.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362118|gb|ACU75615.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 390

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 146/399 (36%), Gaps = 43/399 (10%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
            A  A+    +L  +    +R + V+      ++++R    G         +     +  
Sbjct: 16  AADFADR---ELVPHAAAWDRAESVD-----RSVVKRLGDLGFLGMTIPEEYGGS--EGD 65

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKA 189
           H      +  + + +       SV+   +   +    T    + W PK+ +         
Sbjct: 66  HLSYCLVMEELGRGDTAVRGIVSVSLGLVTKPLLAYGTEDQKRRWIPKLTAG-------- 117

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSP-MSDAFIMLA 247
                      GLTE   G+D   + ++  +    G + L+G K F+++   +D  ++ A
Sbjct: 118 -----DALGCFGLTEPGNGSDAGHLKTKAVRDEKTGDWLLTGSKLFITNGTWADLALIFA 172

Query: 248 QVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           +          G   +   L      G   + +K K+G R  AT EL            L
Sbjct: 173 RTGAKDGAPDDGPRGITAFLVPTDTPGFQAREIKGKLGLRGQATAELILDEVRVPDDARL 232

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             +  G    M  L    +  A   V  ++  L  ++ YA  R   G  + +  +++  +
Sbjct: 233 GEIGQGFKIAMSTLDKGRMSVAAGCVGLIQACLDASVGYAAERDQFGKPIANYQLVQEML 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           ADI++D+ A   L +R+A+  +     +         A   K +C + A      A++  
Sbjct: 293 ADISVDLDAGRLLVWRVADLIERGLPYATA-------ASTAKLFCSEAAVRAANNAIQVF 345

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GYI+E  + ++ R++   ++  G+     L +   L
Sbjct: 346 GGYGYIDEYPVGKYLRDARVLTLYEGTSQIQKLLLGRAL 384


>gi|212635764|ref|YP_002312289.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212557248|gb|ACJ29702.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
          Length = 596

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 167/459 (36%), Gaps = 63/459 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV     +    ++ + +G      D  F      +   I A  +     +        +
Sbjct: 71  KVITPKGFIDAYQQYVDNGWATLTCDPEFGGQGLPEVVGIFATEMKTATNMAFAMYPGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             + + + +    R+ + +  K+ S E+  T             + LTE   GTD+A + 
Sbjct: 131 HGAYAAIHVHGNDRLKQKYLEKLVSGEWTGT-------------MNLTESHAGTDLALLR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++        + ++G K F+SS   D       ++LA++         +  F VP+++ +
Sbjct: 178 TKAVPAGQDTFAITGEKIFISSGDHDLTDNIIHLVLARLPDAPKGVKGISLFAVPKVMVN 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N LC   L++K+G   N+T  + F    G L+G  +     +  M     L 
Sbjct: 238 EDGSLGELNSLCAASLEHKMGIHGNSTCVMNFDGAIGELVGAPHQGLRAMFTMMNQARLG 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             I  +    ++   A+ YA+ R                  ++    ++R +        
Sbjct: 298 VGIQGLGVSDIAYQNALAYAKDRIQGRALSGVKNANLAADPILVHGDVRRMLLSQKSFNE 357

Query: 368 AATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A AL  + A   DEA+  ++       A  A +  PI K +          +A +  GG
Sbjct: 358 GARALMGQQALWLDEAERHNDPQQQKRAAQLAALFTPIVKGFVTDQGFKACVDAQQVFGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            GYI E  + +  R+   + I  G+     LD++                +  D G++ K
Sbjct: 418 HGYIHEWGMEQFVRDIRISMIYEGTNGVQALDLVG-------------RKVMADKGAALK 464

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                ++  I + +  + +  F+    AL ++A  L +A
Sbjct: 465 LWSEEVKTFIQINQAKEAMKPFVA---ALMAAANDLEKA 500


>gi|120403554|ref|YP_953383.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119956372|gb|ABM13377.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 403

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 131/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +              I A           
Sbjct: 28  PAAAEWDEREQTP--WPIIQEAAKVGLYSMEFFAEQAAEP-SGLGMIVAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP    +W P++F    DP                 +E   G
Sbjct: 85  ALAILGTGLAAASLAANGTPEQVGEWVPQMFGSVDDP----------KVAAFCSSEPNAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ +I ++ +     D         W  +  +++  +++A V   +G       +    
Sbjct: 135 SDVGSILTRARYDEATDEWVLNGTKTWATNGGIANVHVVVASVHPELGTRGQASFIIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----------- 315
             GL   +   K G R++ T E+   +      G L V      D +I            
Sbjct: 195 TPGLSQGQKFLKHGIRASHTAEVVLDDVRIP--GRLIVGGKEKFDARIAKVREGKKAAGQ 252

Query: 316 --------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                          M+V   R +   A+ YA  R   G  + +   +   +AD+   I 
Sbjct: 253 AAMATFERTRPTVGAMAVGVARAAYEYALDYACEREQFGRKIGEFQAVAFKLADMKARID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        K  +           + K    + A  V  EA++ +GG+GY  E
Sbjct: 313 AARLLVYRAGWMARNGKEFTAA------EGSMAKLVASETAVYVTDEAIQILGGNGYTRE 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L +   L
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVMARAL 397


>gi|148703118|gb|EDL35065.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e [Mus
           musculus]
 gi|148703119|gb|EDL35066.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_e [Mus
           musculus]
          Length = 626

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 84/484 (17%), Positives = 166/484 (34%), Gaps = 55/484 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILLGSG-NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
              I  G+    + L +    L   G  L  ++      ++ +  + +   LRDS+    
Sbjct: 425 ILLIFEGNQWRILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTV 484

Query: 496 EDKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHS 540
           +            +L  SA                 L R G N + +  +  R  +   +
Sbjct: 485 DLGLTGDLGVVHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANILIN 544

Query: 541 THCM 544
            + M
Sbjct: 545 LYGM 548


>gi|255951270|ref|XP_002566402.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593419|emb|CAP99803.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 633

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 119/545 (21%), Positives = 216/545 (39%), Gaps = 65/545 (11%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTP 82
           P      N Y+SD  L   +A +        V   L   G   +S   +E +  A  N P
Sbjct: 17  PGPLE--NTYTSDPSLQRALAWYLPSATLQSVQPHLTQFGAEAISEQVREWSADAERNVP 74

Query: 83  QLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            + ++   G+R+D  ++     W  L +    + +  + +D+S     R     ++ A  
Sbjct: 75  YVKSHNVWGKRYDYDRLVTTEGWKQLGKWGARNRIVSAGYDKSLGVDRR----TVQYALN 130

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL +     +    S+T     A + + R++K  +   F   +        +      G 
Sbjct: 131 YLYSPSSGLYSCPISMTDG--AAFILSSRINKLPSTHPFHTAFQGLIS--EKDDHWTSGQ 186

Query: 201 GLTEKRGGTDIAAITSQG-----------QKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            +TE+ GG+D+    +             + + DG Y +SG K+F S+  ++  ++LA+ 
Sbjct: 187 WMTERAGGSDVQNTETWATYSPLASSSGSEPLGDGDYLISGFKFFSSATDANLALLLAKT 246

Query: 250 E-GRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             G++  FL P  R +  G        NG+   RLKNK+G +   T ELE  +    L+G
Sbjct: 247 PSGKLSTFLAPLRRTVVGGDGVSRVVSNGVRIHRLKNKLGTKELPTAELELKDMRAHLIG 306

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +++     +  +  +  L + + S++G R +++    +A+ R   G  L   P+  R +A
Sbjct: 307 EIDQGIVTIAPLLNVTRLHTFVGSLAGWRRAISITKSFAKARTTVGEPLWLIPMHLRLLA 366

Query: 361 DIALDIAAATALSFRLANSFDEAKSRS-------------EEAAYARI-MAPITKYWCCK 406
           D+ +    A  L++     F   + R+             +EA      +    K    K
Sbjct: 367 DMEVKHRGAMNLAWFTVALFGVVEDRTPSSNKIAHLPQPGKEAEVVFRTLTATAKAVISK 426

Query: 407 MAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           MA A I E  E +GG GY++     E +I+R  R +  NSI  G+ N +  + +  L K 
Sbjct: 427 MATAGIQECQESMGGVGYMDEADEPEFNISRILRNNAVNSIWEGTTNVLASEFVRFLIKK 486

Query: 462 TNL------FEQLFSTLEQ-DLGSSGKKVITILRDSI--SLCKEDKGLARFLTEKIALAS 512
            NL       ++  + ++  DL ++       L                R     +A   
Sbjct: 487 DNLKIFGTWLDRTLALIQSVDLRNALTAAWLALHARFMTQDPATTVADGRRFMFTVAWIL 546

Query: 513 SAAAL 517
           S A L
Sbjct: 547 SGALL 551


>gi|331697778|ref|YP_004334017.1| Long-chain-acyl-CoA dehydrogenase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326952467|gb|AEA26164.1| Long-chain-acyl-CoA dehydrogenase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 383

 Score =  243 bits (621), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 139/379 (36%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P    L   +   G         +     +           LMA   A
Sbjct: 27  PHHDEWEQAGIVP--RELFATAGRSGFLGIEIPEEYGGGGVRDFRFNAVMDEELMACGAA 84

Query: 149 GHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              +  S+ +   +              W P I S E             +   + +TE 
Sbjct: 85  AAGLGLSLHNDICLPYFMAYCNDEQRARWLPGIASGE-------------LITAIAMTEP 131

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLED 264
             G+D+A++T+   +  D  Y ++G K F+++ ++   ++ A + +       +  L+ +
Sbjct: 132 GIGSDLASMTTTAVRDGDH-YVVNGAKTFITNGINADLVITAVKTDPTQRHKGMSLLVIE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    R  +K+G  +  T EL F++    +   L  + G     +++  L    +S
Sbjct: 191 RGMAGFERGRNLDKLGQHAQDTAELSFTDVRVPVANLLGETEGEGFT-QLVSNLPQERLS 249

Query: 325 VS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +        R +L   + Y + R   G  +      +  +A++  +I  A         +
Sbjct: 250 IGYAAVAAARYALNLTLDYVKERKAFGQPIGSFQNSRFVLAELDTEIDIAQHYVDACVRA 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + +A+ A       KYWC ++   V+ + ++  GG GY+ E  I+R + ++  
Sbjct: 310 LDAGELTAADASKA-------KYWCTELQGRVVDKCLQLHGGYGYMAEYPISRAFADARI 362

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M   +   L
Sbjct: 363 TRIYGGTTEIMKEVIGRSL 381


>gi|313675129|ref|YP_004053125.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312941827|gb|ADR21017.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 599

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 64/401 (15%), Positives = 151/401 (37%), Gaps = 42/401 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L    R    + P + S                     LTE   G+D  +  ++    
Sbjct: 125 ILLYGNERQKAQYIPDMVSG-------------KSKGCYCLTEPDAGSDANSGKTKAVYN 171

Query: 222 SDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                 Y      W  ++ ++D F + A++E       +   + +    GL     ++K+
Sbjct: 172 EAEKAYYLTGQKMWITNAGIADVFTVFAKIEDDE---NLSAFIVEKGFEGLTLGEEEDKM 228

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAI 336
           G R+++T ++  ++        L     G    + +L    +   I  +   + ++  A+
Sbjct: 229 GIRASSTRQVFLNDVKVPEENLLGQRGEGFKMALNVLSTGRIKLGIGGLGVSKKAIDYAV 288

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AK 384
            YA  R   G  +     +++ +A + +   A  A ++R     D+             +
Sbjct: 289 EYAVNRKQFGQSISSFGAIQQKLAKMVVKTYALQAAAYRTGELIDQKEEEYLKSGMSMEE 348

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           ++++  +   I   I K +  +    V+ E ++  GG G+ EE  +AR YR+S  + I  
Sbjct: 349 AKAKAVSAYGIECAIIKVFGTEAQDFVVDEGLQIFGGMGFSEEAPMARLYRDSRISRIFE 408

Query: 445 GSGNAMVLDVLNLLEK----GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           G+     + ++++L K    G        + ++++L +          D++    E    
Sbjct: 409 GTNEINRMLIVDMLLKKAMNGELDLMNAATAVQKELTNIPSLTPNENTDTLEKATEVLDN 468

Query: 501 ARFLTEKIALASSAAALYRAGMN-----DIADVFLENRFLD 536
            + +T  +A A++   + +         ++AD+ ++   L+
Sbjct: 469 LKKITLIVAGAAAQKLIMKLKDEQEILMNVADMLIQIYLLE 509


>gi|262201328|ref|YP_003272536.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084675|gb|ACY20643.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 381

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 33/371 (8%)

Query: 100 HPAWH----ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           H A H     ++ +    GL    +   +  +     A  +    L  + Q  A  L + 
Sbjct: 29  HDAEHSFPYEVIAQMGQMGLFGLPFPEEYGGMGGDYFALSLALEELGKVDQSVAITLEAG 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A  +    +    + + P + S                  G GLTE   G+D  A 
Sbjct: 89  VSLGAMPIFRFGSEEQKQQYLPDLTS-------------ARALAGFGLTEPGAGSDAGAT 135

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLEDGSPNGL 270
            +  +   D  + ++G K F+++  +D      + A       G   +  ++      G 
Sbjct: 136 ATTAKDDGD-SWIINGAKQFITNSGTDITSLVTVTAVTGTKDDGRKEISTIIVPSGTPGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
             +   NK+G  ++ T  L F++        L     G    + IL    +  A ++   
Sbjct: 195 TAEPPYNKVGWNASDTHPLSFADVRVPKENLLGTRGRGYANFLSILDEGRIAIAALATGV 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  + E++ YA+ R   G  + +   +  AIA +      A    +  A      K   
Sbjct: 255 AQGCVDESVKYAKDRKSFGKPIGEYQSVSFAIARMEARAHVARTAYYDAAAKMLAGKPFK 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EA+ A+++A        + A      A +  GG G++ E  +ARHYR+S    I  G+ 
Sbjct: 315 KEASIAKMIA-------SEAAMDNARMATQIHGGYGFMNEYPVARHYRDSKILEIGEGTT 367

Query: 448 NAMVLDVLNLL 458
              ++ +   L
Sbjct: 368 EVQLMLIAREL 378


>gi|254481175|ref|ZP_05094420.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038338|gb|EEB79000.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 410

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 131/359 (36%), Gaps = 28/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASM 161
               R++   G    IW       +     +     +     A++        S      
Sbjct: 59  REAFRKAGEQGFL-MIWPEERYGGMGDDDFRFEQIIIEETNYARVGDWFNSLHSRLVGPY 117

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +      + PK  S E               + + +TE   G+D+A + +   + 
Sbjct: 118 LTRFGSEEQCARFLPKCASGEC-------------VLAVAMTEPDAGSDLAGMRASANEQ 164

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + L+G K F+S+ + +D  ++ A+ +       +   L +    G    R   K+G
Sbjct: 165 DDH-WVLNGSKTFISNGINADLVVVAAKTDPENDPHHMTLFLVERGMEGFERGRNLKKMG 223

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F++       +LG+       +        L  A   ++G ++S      
Sbjct: 224 MKAQDTAELFFNDVKIPKDNVLGEPGKGFYYLMMGLAEERLLGAAGYLAGAQLSWDLTAD 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +      +  +A++  ++  A     +   SF+E    + +AA A    
Sbjct: 284 YVKDRKAFGKPVAVFQNTQFKLAEMRTELDIAQVYVDQCVKSFNEGSFTAVDAAKA---- 339

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              K +  ++   V    ++  GG GY++E  I+R Y ++  ++I  GS   M L +  
Sbjct: 340 ---KLYTSELQVKVAELGVQLHGGHGYMDEYPISRQYTDAKISTIYAGSSEIMKLIIGR 395


>gi|302342605|ref|YP_003807134.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639218|gb|ADK84540.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 606

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 89/499 (17%), Positives = 188/499 (37%), Gaps = 61/499 (12%)

Query: 33  GMNAYSSDS-----LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHA 86
           G+N ++ D      LL   +     + ++         +     +  ++AN    P +  
Sbjct: 2   GVNHFNRDPRDTQFLLHEHLGVAKLLAYEPFADFSVEHIDQVMAQAHQVANQCLGPAMQD 61

Query: 87  YGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               G ++   +V+   A+H   R     G      DR +  +         A   +  A
Sbjct: 62  GDREGCQFQAGEVKVPSAFHDCWRALRQGGWLAMANDRRWGGLGLPAVVSGLANEYFFGA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +        +  +A ++    T    + + P+++S ++  T             + LTE
Sbjct: 122 NMALNMYPLLTSGNARLIEAFGTEADRELFVPRMYSGQWAGT-------------MCLTE 168

Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
              G+D+  + +      D     +Y + G K F+S+   D       ++LA++EG    
Sbjct: 169 PLAGSDVGWLETSATPDPDSPDKRVYKIKGRKRFISAGNHDLTENIIHLLLARIEGAPHG 228

Query: 252 --RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD 301
              +  F+VP++  +     G PN +    +++K+G   +AT  L F       G LLG+
Sbjct: 229 TKGISLFIVPKIWVEPDGALGRPNDVVCTGIEHKMGIHGSATCALHFGGSDQCRGILLGE 288

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------GG--ILIDQ 352
            +     +  M     + + +M ++    +   A  +A+RR          G    +I+ 
Sbjct: 289 PHTGMAKMFQMMNEARVGTGLMGLALSASAYDAARTWAKRRVQGPPFTDRRGQRVKIINH 348

Query: 353 PVMKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             ++R + ++     A  AL         +A    +A +R + A    +  P+ K +C  
Sbjct: 349 EDVRRMLLNMKAGTEAMRALIAKTYYLMDVARFEPDAAARQKAAGLVELYTPLVKAYCTD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
              ++  EA++  GG+GY       ++ R+    SI  G+     LD++   L  +G  +
Sbjct: 409 FGFSLTREALQVFGGAGYCNGFPAEQYVRDCKILSIWEGTNYIQSLDLVGRKLGLEGGAV 468

Query: 465 FEQLFSTLEQDLGSSGKKV 483
           F+   + ++     +    
Sbjct: 469 FQGALADIQTFCADNAGDA 487


>gi|307726730|ref|YP_003909943.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587255|gb|ADN60652.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 381

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 122/356 (34%), Gaps = 25/356 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L+     G    +                 A             ++     +A  +    
Sbjct: 46  LKALAELGFLGMLIPEQHGGTGTGVLDFCLAQHEIAAVDAGVATIVHVHNFTAMCIVQHG 105

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + P              M +        LTE   G+D AA+ +  ++  D  Y
Sbjct: 106 TEEQKQRYLP-------------AMARGESIGAFLLTEPHAGSDTAALRATARRDGDH-Y 151

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+S+   +D  +  A  +   G       + D    G    R++NK+G  +  
Sbjct: 152 VLNGTKQFISNGSEADVGVAFAITDKAAGKRGASTFIIDPKAPGYHVTRVENKLGQHTAH 211

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T ++   +       LLG        V        +    ++    R +L  A+ YAR R
Sbjct: 212 TAQISLEDYRVPAANLLGAEGDGYRTVMGGLCDGRIGIGFIAAGVARAALDAAVRYARER 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +I    +   +AD+A  +  A       A   D      +E       A I K 
Sbjct: 272 EAYGAPIIKLQGVAFDLADMAAQVEVALQYCVHAARLRDTGADCIKE-------ASIAKM 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  ++A  V ++A++  GG GY+ + ++ R+ R+     I  G+ +   L +   L
Sbjct: 325 FASEIAEKVCSDALQIHGGYGYLTDFAVERYLRDVRICKIYEGTSHIQKLIISRHL 380


>gi|74226889|dbj|BAE27089.1| unnamed protein product [Mus musculus]
          Length = 515

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 86/457 (18%), Positives = 172/457 (37%), Gaps = 56/457 (12%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
                 +        R A +  M  L     L +        + L  T    + + P++ 
Sbjct: 7   PSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKYLPRVA 66

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP 238
           S                     LTE   G+D+A+I S       G  Y L+G K ++S+ 
Sbjct: 67  SG-------------QALAAFCLTEPSSGSDVASIRSSAIPSPCGKYYTLNGSKIWISNG 113

Query: 239 M-SDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
             +D F + A+   +          +   + + S  G+ +   + K+G +++ T E+ F 
Sbjct: 114 GLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKASNTSEVYFD 173

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSG 346
                     NV     +  K+ +  L++    ++          +A+A+ +A  R   G
Sbjct: 174 GVKVPS---ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVDHATNRTQFG 230

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCC 405
             + +  V++  +A +A+      ++++ L+ + D+  K    EAA       I+K +C 
Sbjct: 231 DKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA-------ISKIFCS 283

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG-- 461
           + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L V     ++KG  
Sbjct: 284 EAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFVALQGCMDKGKE 343

Query: 462 ----TNLFEQLFSTLEQDLGSSGKKVITI--LRDSISL-------CKEDKGLARFLTEKI 508
                N  +  F  +   +G +GK++     +   +SL             LA    ++ 
Sbjct: 344 LTGLGNALKNPFGNVGLLMGEAGKQLRRRTGIGSGLSLSGIVHPELSRSGELAVQALDQF 403

Query: 509 ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
           A    A  L +     + + FL  R  D     + M+
Sbjct: 404 ATVVEAK-LVKHKKGIVNEQFLLQRLADGAIDLYAMV 439


>gi|326441280|ref|ZP_08216014.1| acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 385

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 142/379 (37%), Gaps = 38/379 (10%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V  H  W            +    G+        +     + + K +A     +A+    
Sbjct: 26  VPVHDEWYAAGQTPRDFYHKLGELGIFGIEVPEEYGG-AGEHSFKYQAVLTEEVARAGVS 84

Query: 150 HLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              S    +  +  LM   T    K W P   S              +    + +TE   
Sbjct: 85  FGGSGVHVALCLPYLMAYATEDQKKRWLPDFVSG-------------ASMYAIAMTEPGT 131

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLL 262
           G+D+A + +  ++  DG  Y L+G K F++  + +D  I+ A+            +   +
Sbjct: 132 GSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDRRHGISLFV 191

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
            D    G    R  +K+G R++ T EL F++     G LLG+ +     +        L 
Sbjct: 192 VDTGLEGYAVGRKLDKLGLRTSDTAELSFTDVRVSAGDLLGEEHKGFSYLGQNLPQERLA 251

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ + +    ++     Y R R V G  +      K  +A    ++ AA A+  R  ++
Sbjct: 252 IAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFELASCKAEVDAAEAVVDRALDA 311

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  + EAA A       K +C ++A  VI   ++  GG GY+ E  IAR Y ++  
Sbjct: 312 HDAGELTAAEAASA-------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRV 364

Query: 440 NSILLGSGNAMVLDVLNLL 458
           N I  G+   M   +   +
Sbjct: 365 NRIYGGTSEVMKSIIAKSM 383


>gi|218779317|ref|YP_002430635.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760701|gb|ACL03167.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 605

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 86/497 (17%), Positives = 180/497 (36%), Gaps = 74/497 (14%)

Query: 82  PQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P L      G +++   V     +  + ++ +          +               A 
Sbjct: 55  PTLAEGDKEGVKFENGVVTTPECFRPVHKKILEGEWQSVGVPQDMGGQGAPGHIAYAVAE 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +L A             +A M+ L  T      + P + + ++  T             
Sbjct: 115 YFLGANYAVSGYAKMGAGTARMIHLYGTQEQKDKYIPNLVAGKWGGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+D+ A+ +   +  DG + L+G+K F+++   D        +LA++EG   
Sbjct: 162 MLLTEACAGSDVGALETTAVRNPDGTFSLTGNKIFITNGEHDLVENIIHPVLARIEGDPP 221

Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLG 300
               +  F+VP+   +     G  N +    ++ K+G   +AT  +         GFLLG
Sbjct: 222 GTSGISIFIVPKYFVNEDGSLGDRNDIVCTGVEEKLGIHGSATCSMSLGTKGKCTGFLLG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------- 347
           +       + +M     + + +  +S    +   A++YAR R   G              
Sbjct: 282 EERKGMNIMFNMINGSRMGTGLQGLSYASAAYLLAVNYARERVQ-GRSLADFKDKSAPSV 340

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITK 401
            +I+ P ++R +  +   +    +    L +     ++ + +           ++ P  K
Sbjct: 341 PIIEHPDVRRNLLWMKSYVDGMRSFFHYLVSCSTRMETAATQEEREIYSDLFEMLTPSIK 400

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +       V  +A++  GG+GY  +  + ++ R+    SI  G+     +D+       
Sbjct: 401 DYLAVKGHEVCVQAIQVFGGAGYTRDYLVEQYARDCKITSIFEGTSGIQAMDL------- 453

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI-----ALASSA-A 515
                 L   L +  G+    ++  +  ++S  KE +GL + L E +     A A++A  
Sbjct: 454 ------LARKLGRKKGAVFAHLLKEMNATVSRSKEFEGL-KDLAEDLEQAIPAFAATAEG 506

Query: 516 ALYRAGMNDIADVFLEN 532
            L RA   +    F  +
Sbjct: 507 ILKRAASPEFMTAFAHS 523


>gi|297156248|gb|ADI05960.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 403

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 126/381 (33%), Gaps = 38/381 (9%)

Query: 96  KVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    + A +   + + G+   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPAQIVEGLKELGVFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + PK+   E                   ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQQEYFLPKMALGEIRG-------------AFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSP 267
            ++G +  D         W  +   S    +L + +              +   L +  P
Sbjct: 142 ATKGVRDGDDYLLTGQKMWLTNGGTSTVVAVLCRTDEPDAQGEKPAPHKSMTTFLVEKEP 201

Query: 268 ------NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY 317
                  GL       K+G +   T EL            L G        + D   +  
Sbjct: 202 GFGEVRPGLTIPGKIEKMGYKGVDTTELILDGLRIPADRVLGGTTGRGFYQMMDGVEVGR 261

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           ++ A       R +    + YA++RH  G  +     ++  +A++A  + AA A+    A
Sbjct: 262 VNVAARGCGVARRAFELGVAYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAA 321

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+
Sbjct: 322 RKKDSGRRNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREA 374

Query: 438 PANSILLGSGNAMVLDVLNLL 458
           P   I  G+     + +   L
Sbjct: 375 PMLLIGEGTAEIQKMIIGRRL 395


>gi|170735328|ref|YP_001774442.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821366|gb|ACA95947.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 393

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 131/372 (35%), Gaps = 25/372 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+   +P  H +       GL    +  ++       +  I A   +       
Sbjct: 26  PRADEIDRTAEYP--HDIFALLKELGLFTLPFPEAYGGAGSVMSACI-AVEEFGRVCYNT 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G+L+    T    +    T        P +                 +   L +TE + G
Sbjct: 83  GYLLVVQWTPFGAILEGGTEEQKARLLPGL-------------ACGDLRGALSITEAQSG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP 267
           +D++ I +  ++ + G        W  +S ++D  ++ A+     G    +   + D   
Sbjct: 130 SDVSGIRTTARRKNGGYVLNGSKIWCTNSHIADFILVAAKTLDEQGQPLGINLFIVDRHT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIM 323
            GL     ++K+G R   +  L F + F      L            +         A  
Sbjct: 190 PGLTIGNEEDKMGARGVPSCPLYFDDAFIRADDRLGPEGSQGFKVAMEALNTSRPIVAAR 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + ++  A+ + + R   G  + D   ++  IAD+     AA  L +R A+  D  
Sbjct: 250 AVGIAQGAIDHAVKFIQDRVAFGQAISDFQGVRWMIADMVTQTEAARQLVYRTASLVDAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S  E A     MA + K +   +A  V  +A++  G +G   E  I R++R++    I+
Sbjct: 310 VSGRELA----PMAAMAKMFASDVAMKVATDAVQLFGAAGISNEYPINRYFRDAKVVQII 365

Query: 444 LGSGNAMVLDVL 455
            G+       V 
Sbjct: 366 EGTNQIQRNIVA 377


>gi|315500028|ref|YP_004088831.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315418040|gb|ADU14680.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 584

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 100/547 (18%), Positives = 197/547 (36%), Gaps = 62/547 (11%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKV 97
           + +  +   + S  + + +     +L        +++      L+      G +   DKV
Sbjct: 15  TAVTGIERLYQSSAYPDFD---GDLLDAILDAAGQLSEEVLAPLNRVGDTHGAKLENDKV 71

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
              P +   +      G                +A ++ A  ++  A +      + S  
Sbjct: 72  TVAPGFAEAVSAFAEGGWAGLGAPAEHGGQAMPKALEMAAYEMFHAANMAFALYPTLSQA 131

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    T R    + P + S E+  T             + LTE + G+D+A +TSQ
Sbjct: 132 AIEALHHHGTERQKALYLPYLTSGEWSGT-------------MNLTEPQAGSDLALLTSQ 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-- 264
                D  Y L+G K +++    +       ++LA++ G       +  FL P+ L +  
Sbjct: 179 AVPDGDA-YRLTGQKIYITWGDHETRDNILHLVLARLPGAPEGTRGISLFLCPKYLVNED 237

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              G  N L    L++K+G  ++ T  + F      L+G  +     +  M     L   
Sbjct: 238 GSLGERNALRAVGLEHKLGIHASPTCVMAFEGAKAELVGQPHQGLMAMFTMMNAARLAVG 297

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIADIALDIAAATALS 373
           +  V     +   A+ YAR R              + D P ++  +A     I AA  + 
Sbjct: 298 VQGVGIAERAYQLALAYARDRRQGNSVLTGEKKAPIFDHPDVRLMLAVSKAKIEAARGIC 357

Query: 374 FRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              A + D+ +  ++         + P+ K W   +   V +  ++  GG G+IEE   A
Sbjct: 358 LLTAIAADDYRLNADARVKRREDFLVPVAKAWATDIGVEVASAGVQVHGGMGFIEETGAA 417

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK--VITILRD 489
           +HYR++    I  G+      D++   + G +    L   L+ D+ S  +   +   L+ 
Sbjct: 418 QHYRDARIAPIYEGTNGIQAGDLVGR-KLGDDAASAL--ELKADIQSYIQTNNLSDDLKA 474

Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI---ADVFLENRFLDNCHSTHCMLH 546
           S++       L  F    + L +      +A   D+   A  +L+     +    + +L 
Sbjct: 475 SVAQLDT--ALTAFEAASLWLVAQ----KKACPADVQAGATAYLK--LTGDVVGGYVLLR 526

Query: 547 GRFNAAH 553
           G   A  
Sbjct: 527 GALEATA 533


>gi|27374207|gb|AAO00971.1| CG4703-PA [Drosophila erecta]
          Length = 238

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++  ++A I+ A    ++    +   +   +  G    + ++K+G R
Sbjct: 1   DHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATKGFSLGKKEDKLGIR 60

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGM-----RVSLAEAI 336
            ++T +L F +    ++   N+   P    KI +  LD+  + ++G      + +L  A+
Sbjct: 61  GSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAV 117

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++R   G  +     +++ IAD++L + +A  L++R A   D+ +  ++EAA A++ 
Sbjct: 118 DYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLA 177

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A      C         + ++ +GG GY+ + +  RHYR++    I  G+     L +  
Sbjct: 178 ASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAG 230

Query: 457 LLEK 460
            + K
Sbjct: 231 SILK 234


>gi|41409749|ref|NP_962585.1| FadE3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398581|gb|AAS06201.1| FadE3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 405

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 136/368 (36%), Gaps = 32/368 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++       +          +R         +     M      
Sbjct: 56  YPEAWIEQMKR---IGIYGLAVPEEYGGSPVSMPCYVRVTEQLARGWMSLAGAMGGHTVV 112

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P++ S E   T             + LTE  GG+D+  +++  
Sbjct: 113 AKLLTLFGTEDQKRAYLPRMASGEIRAT-------------MALTEPGGGSDLQNMSTTA 159

Query: 219 --QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQR 274
                SDG+       W  ++  S    +L + + +       +  LL +  P GL   R
Sbjct: 160 LPDPDSDGLVVNGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVEHGP-GLTVSR 218

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRV 330
              K+G +   + EL F N        L      G  + MK L    +  A  ++     
Sbjct: 219 DLPKLGYKGVESCELSFGNFRAPATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATA 278

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA
Sbjct: 279 ALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEA 338

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  ++A  +   A+   GG GY +E  + R++R++P   +  G+    
Sbjct: 339 GMA-------KLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQ 391

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 392 RNVIARQL 399


>gi|317402923|gb|EFV83463.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 608

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 99/586 (16%), Positives = 189/586 (32%), Gaps = 82/586 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVE 98
            L  L      +     E +   ++    +E  R        L          W+   V 
Sbjct: 13  ALKELAGLDDVLKLPGFEEVTPDLVDAILEENGRFVEQAIAPLNVPGDTRPPVWNDGHVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +    +     G       +++      +            A L        +   
Sbjct: 73  ATPGYAQGFKDYAAGGWQGLQHPQAWGGQGLPKLVAAAPGENIQAASLAFSLCPMLTDGV 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +  + +    + + P +   ++  T             + LTE + G+D+A + ++ 
Sbjct: 133 IEAILTVGSEEQRRKFVPNLIGGKWTGT-------------MNLTEPQAGSDLAQVATRA 179

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
            +  DG Y LSG K F++    D       ++LA+          +  F+VP+ L     
Sbjct: 180 VRQEDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPPGVKGISLFIVPKFLVGADG 239

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEF--------SNTFGFLLGDLNVSTGPVEDMKI 314
             G  N +    L++K+G   + T  L +            G+L+G+LN     +  M  
Sbjct: 240 SLGPRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEAGEGAVGYLVGELNRGLEYMFIMMN 299

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDI 366
                     +     +   A+ YAR R              +   P ++R +  +    
Sbjct: 300 AARYSVGQQGIGVSERAYQHALAYARERVQGRAVEGSSAAVAIARHPDVQRMLLTMKALT 359

Query: 367 AAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            AA A+S+  A + D+       + R+   A+   M P+ K +  + A  V +  ++  G
Sbjct: 360 EAARAVSYVTAAAHDKGTHHPDPEQRARNRAFYEYMVPVVKGFATESAVEVASLGVQVHG 419

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQD 475
           G GYIEE   A++YR++    I  G+      D++                       + 
Sbjct: 420 GMGYIEETGAAQYYRDARILPIYEGTTAIQANDLVSRKTQRDAGATAYAAIAAMRETLRA 479

Query: 476 LGSSGKKVITILRDSISLCKEDKGLA--------RFLTEKIALASSAA-------ALYR- 519
           + +   +     RD + L +++   A         F+ E+ A+   A         +   
Sbjct: 480 VEAESSRAAASERDGLRLLRDNLDSAIQAYESGVEFILEQTAVNIRAVYASSVPYLMLAG 539

Query: 520 --AGMNDIADVFLENR--FLDNCHSTH---CMLHGRFNAAHIIDSL 558
              G   +A   L  R               +  G F AAHI+   
Sbjct: 540 VVHGGWQMARAVLACRRLLAAGSTDPFHREKLATGLFYAAHILPRA 585


>gi|149922588|ref|ZP_01911017.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149816544|gb|EDM76040.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 600

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 89/476 (18%), Positives = 166/476 (34%), Gaps = 44/476 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
           AL+      GL           +        R   R+       A  L + +      + 
Sbjct: 85  ALIDELKEMGLFGLQIAEEHGGLGLSNTGYARLFERISATDASIAVTLGAHNSIGLKGIL 144

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + P +                       LTE   G+D A+I ++ +   D
Sbjct: 145 IFGTDAQKEQYLPDLSGG-------------DKVAAFCLTEPSSGSDAASIRTRAKLSED 191

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           G          W  +   +D F + AQ     +G +    +   + +    G+     ++
Sbjct: 192 GEHWILDGSKMWITNGGFADLFTVFAQTQIEVDGEMKDR-ITAFIVERDFGGVESGPEEH 250

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
           K+G + ++T  + F          L  V  G    M IL       A   V G +  +  
Sbjct: 251 KLGIKGSSTTTIHFDGCKVPKQNVLGEVGGGFKVAMTILNNGRFGLAAGCVGGAKRLIGL 310

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA 393
           A  YA  R   G  L D  ++K+  A++AL   AA ++++      D+  +  + EAA +
Sbjct: 311 AATYANERKQFGKSLSDFGLIKKKFAEMALMTYAAESMTYMTCGLMDKGGRDYAIEAAMS 370

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++ A    +        +  E ++ +GG GY +E    R  R+   N I  G+   + L 
Sbjct: 371 KVAASEAMW-------IIANECLQVMGGLGYSKEYVFERFVRDGRINIIFEGTNEILRLF 423

Query: 454 V-LNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILR-----DSISLCKEDKGLARFL 504
           + L+ ++       +L + L+   ++ G    ++++ +R     + +         A   
Sbjct: 424 IALSGIQAPGEHLRELVAALKNPWENYGMVLTELVSRVRSRVITEELDHAHTKLKRAAVH 483

Query: 505 TEKIALA-SSAAA-LYRA-GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
            E  A A   A   L R  G   I +  L  R  D     + M+     A   +D 
Sbjct: 484 IEDKAEAFGQAVERLLRHFGKKIIDEQMLLERVADIAIDLYAMIAVVSRATRALDQ 539



 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 333 AEAIHYARRR--HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEE 389
           AEA   A  R     G  +ID+ ++   +ADIA+D+ A  A+  R   + D+  K  + E
Sbjct: 488 AEAFGQAVERLLRHFGKKIIDEQMLLERVADIAIDLYAMIAVVSRATRALDQNRKHAAHE 547

Query: 390 AAYARIMAPITKYW-------------CCKMAPAVIAEAMECIGGSGYIEERSI 430
              A +                         A   IA+A+   G  GY+ E  +
Sbjct: 548 CKLASVFCEQADRRIRRRLRALEQGRKNGDEALREIADALFEHG--GYVPEHPV 599


>gi|56478645|ref|YP_160234.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314688|emb|CAI09333.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 137/384 (35%), Gaps = 37/384 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPAW----------HALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           +L A      R+ + E  P +            + R++   GL C      +       A
Sbjct: 12  ELEALRTTARRFFETEVAPHYDRWVEQGKIDREVWRKAGELGLLCIGIPEEYGGHGGTFA 71

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H++            A   +  S     M+    TP   + W PK+ S E+         
Sbjct: 72  HEVVVMEEQARVADTALPYVPGSAGGPYMLMKNGTPEQTRKWMPKLVSGEHF-------- 123

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG 251
                I + +TE  GG+D+A + +  ++  +  Y ++G K F++    +D  I+ A+  G
Sbjct: 124 -----IAVCVTEPGGGSDVANVRTTARRDGNE-YVINGSKTFVTMGSQADLAIVCART-G 176

Query: 252 RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVST 306
             G   +   + +     G    R   K+G  +  T E+   +        L G    + 
Sbjct: 177 GPGKDGLSMFMVEVRDCPGFHLGRRLKKVGQHAIDTHEVFLEDLRVPVENLLGGVEGKAF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G          L  A+ S++    ++   + YA+ R + G  L      +  +A+   + 
Sbjct: 237 GGAMSGFDRERLVIALTSIATAERAIELTVDYAKERKMFGQTLWGFQNTRIKLAECMTEA 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                    L       +      +       + K+WC +    +I E ++  GG GY+ 
Sbjct: 297 KIGRVFIDTLIMKVLNGEPVDSADS------AMAKWWCSEKQNRIIDECLQFFGGYGYMM 350

Query: 427 ERSIARHYRESPANSILLGSGNAM 450
           E  IAR + ++    I  G+  A+
Sbjct: 351 EYPIARLFVDARVQKIYGGANEAL 374


>gi|302344432|ref|YP_003808961.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641045|gb|ADK86367.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 607

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 93/492 (18%), Positives = 177/492 (35%), Gaps = 65/492 (13%)

Query: 88  GPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G    +   V    ++H        +G         F      Q        ++  A
Sbjct: 63  DREGAVYHQDGSVTLPKSFHDAFAVMRENGWVSYANKPDFGGQGLPQGVAALVTEIFFGA 122

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +           +  ++    T    + +  +++S E                 + LTE
Sbjct: 123 NMAFSMYTGFCSAAGRVIENYGTDEDKELFCTQLYSGE-------------ATGTMCLTE 169

Query: 205 KRGGTDIAAITSQGQKI--SDG--IYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV-- 253
              G+D+ A  ++  K   SD   IY + G K F+S    D       ++LA++EG    
Sbjct: 170 PDAGSDVGAARTKAVKDTSSDDPRIYFIEGVKRFISCGDHDMTENVIHLVLARIEGDPEG 229

Query: 254 ----GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301
                 F+VP++  +     G PN +    +++K+G   ++T  L F       G +LG+
Sbjct: 230 TKGLSLFIVPKIWVNPDGSLGEPNDVFTAGIEHKMGVHGSSTCTLNFGENGKCRGIILGE 289

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------GG--ILIDQ 352
                  +  M     L   + ++     +   A  YA+ R  S       G    +I  
Sbjct: 290 PRTGMPKMFQMMNEARLGCGMQALGLAASAYDSARIYAKERVQSAPFIDRRGKAVPIIQH 349

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMA----PITKYWCCK 406
             ++R + +      A  AL F++    D A++  +E  A +A  +A    PI K +   
Sbjct: 350 EDVRRMLMNGKSVTEAVRALLFKIGYLTDIAENDPDEEKARHAEHLADLLLPIAKSYASD 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464
               VI ++++ +GG GY  E  + ++ R+    SI  G+     LD++   +  +G  +
Sbjct: 410 KGFEVIRDSIQAMGGVGYCSEFPVEQYARDMKIISIWEGTNYIQALDLIGRKMQLEGGKV 469

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
           F+    ++  D  ++ K       D  +L K  + +       +          RA +  
Sbjct: 470 FQGCLQSI-FDFTAAHKDDADFAVDLKTLFKATQSVGDVAMRFMGYFGDG----RAQLIP 524

Query: 525 IADVFLENRFLD 536
           +A      RF D
Sbjct: 525 LA----ATRFQD 532


>gi|296445505|ref|ZP_06887462.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296257071|gb|EFH04141.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 595

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 94/548 (17%), Positives = 193/548 (35%), Gaps = 77/548 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWD---KVEFHPAWHALLRRSIHDGLHCSI 119
            +++    E A++       L+      G R D    V     +       +  G     
Sbjct: 36  DLVAQILGEGAKICEETLAPLNRRGDEEGCRRDAAGDVATPGGFKEAFDAFVAGGWVGLA 95

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               ++      A  +  +     A +     M  +  + + +         + + P   
Sbjct: 96  VPPEYDGQGLPYALALAMSEYGSSANMALAMYMGLTQGALAALLRHGDEEQKRLFVP--- 152

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                     PM        + LTE + GTD+  +T++     DG Y ++G K F+S+  
Sbjct: 153 ----------PMAAGRWTGTMNLTEPQCGTDLGLLTTKATPRGDGSYSITGQKIFISAGE 202

Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283
            D       ++LA++EG       +  F+VP+         G  N +    +++K+G   
Sbjct: 203 HDLSENIIHLVLARIEGAPAGVKGISLFIVPKFEVAADGSLGVRNKVVCGAIEHKMGIHG 262

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           NAT  + +    G L+G+ N     +  M     L  A+  ++   V+   A+ YA+ R 
Sbjct: 263 NATCVMNYDGARGHLVGEANRGLAAMFVMMNEARLGVAVQGLALSEVAYQNALSYAKERL 322

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAKS 385
                            +I  P ++R + +I     AA  L+        +A+  ++A++
Sbjct: 323 QGRSLSGAKNPSGGADPIIVHPDVRRNLLEIRAFNEAARGLALLAALDSDVAHRAEDARA 382

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R        ++ P+ K     M      +A +  GG GYI E  + +  R++    I  G
Sbjct: 383 RQAAEDRLGLLTPVLKGVFTDMGFDNAVKAQQIWGGHGYINENGMEQFVRDARIAMIYEG 442

Query: 446 SGNAMVLDVLN--LLEKGTNLFEQLFSTL-----EQDLGSSGKKVITILRDSISLCKEDK 498
           +     LD++   L +         F+ +      +   ++ K  +  ++ ++   ++  
Sbjct: 443 ANGIQALDLVGRKLPKDNGRAAMAFFAEVNEFLTRESADAAMKPYVEPMKGALGDLQKAT 502

Query: 499 GLARFLTEKIALA-----SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
               +L +  ALA     +  +  Y      +A  ++  R                +A  
Sbjct: 503 A---WLVQN-ALAKPDNGAGVSYDYMHLFGRVALGYMWTRIAR----------AALDAKA 548

Query: 554 IIDSLYLD 561
             D+ +LD
Sbjct: 549 KGDAAWLD 556


>gi|254777397|ref|ZP_05218913.1| FadE3_2 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 405

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 138/368 (37%), Gaps = 32/368 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++       +          +R         +     M      
Sbjct: 56  YPEAWIEQMKR---IGIYGLAVPEEYGGSPVSMPCYVRVTEQLARGWMSLAGAMGGHTVV 112

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P++ S E   T             + LTE  GG+D+  +++  
Sbjct: 113 AKLLTLFGTEDQKQAYLPRMASGEIRAT-------------MALTEPGGGSDLQNMSTTA 159

Query: 219 QKISD-GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQR 274
               D     ++G K ++S+      I +L + + +       +  LL +  P GL   R
Sbjct: 160 LPDPDSDALVINGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVEHGP-GLTVSR 218

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRV 330
              K+G +   + EL F N        L      G  + MK L    +  A  ++     
Sbjct: 219 DLPKLGYKGVESCELSFDNFRAPATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATA 278

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA
Sbjct: 279 ALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEA 338

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A       K +  ++A  +   A+   GG GY +E  + R++R++P   +  G+    
Sbjct: 339 GMA-------KLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQ 391

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 392 RNVIARQL 399


>gi|229585901|ref|YP_002844403.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|238620876|ref|YP_002915702.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|228020951|gb|ACP56358.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|238381946|gb|ACR43034.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 400

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRISVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A I +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPAAGSDVAGIQTVAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  A+ FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAASLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|229489223|ref|ZP_04383089.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324727|gb|EEN90482.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 393

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 128/360 (35%), Gaps = 33/360 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL     D  +  +                  +    +++     A M++   TP     
Sbjct: 51  GLFGLTIDPEYGGIGESLLTYALCVEELARGWMSVSGVINTHFIVAHMISAHGTPEQKAK 110

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P++ S E             +     ++E   G+D+AAI+++ ++   G Y ++G K 
Sbjct: 111 YLPRLASGE-------------LTGAFSMSEPALGSDVAAISTKAKRTDSGDYVITGQKM 157

Query: 234 FLSSPMSDAFI-MLAQVE--GRVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSN 284
           +L++  S   + +L + +         +  +L +          GL       K+G +  
Sbjct: 158 WLTNGGSSTLVAVLVKTDEGAEKPHNNLTTILIEKPAGFGEVLPGLTIPGKLEKMGYKGI 217

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            T E+ F          L G        + D   +  ++ A  +    + +   A+ YA+
Sbjct: 218 DTTEMIFDGFEIGAEEVLGGTPGSGFRHMMDGVEVGRVNVAARACGIAQRAFELAVTYAK 277

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   +   IA++   + AA  +    A   D  +     A  A+ +A   
Sbjct: 278 QRETFGKPIAEHQAIAFRIAEMGTKVEAAHLMMVNAARLKDSGERNDVAAGMAKYLA--- 334

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                +    V  ++    GG GY +E  I R  RE+P   I  G+ +     +   L +
Sbjct: 335 ----SEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAPFLLIGEGTSDIQKQIISKGLLR 390


>gi|296169372|ref|ZP_06850996.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895961|gb|EFG75652.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 382

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 125/360 (34%), Gaps = 30/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   GL        +        H+    +    A   A      S  ++  +A
Sbjct: 48  REFWNKAGAAGLLGLDLPEQYGGGGGSFGHEAVVMQERAYAHDTAFGFSVHSTLASHYIA 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K W PK+ S E               I + +TE   G+D+ +I +   +  D
Sbjct: 108 EYASEEQKKRWIPKMVSGEM-------------VIAVAMTEPGTGSDLQSIRTTAVRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+S+      ++ +A+ E  +       + E     G    R+  K+G  
Sbjct: 155 E-YVINGSKTFISNGSHCDLVVIVAKTESGLSL----MVAETEGLAGFQRGRVLEKVGQH 209

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T EL F++        L G        + +      L   + +++    ++ E I Y
Sbjct: 210 GQDTRELAFTDMRVPAANLLGGVEGKGFAQLMEQLPRERLTIGVEAIAMAEAAVVETIRY 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  L+     K  +A+   ++ A  AL       + + K  +         A 
Sbjct: 270 VKERTAFGKPLLAFQNTKFVLAECKAEVLAGKALIDYCTGRYLDGKLDAA-------TAS 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K W       V  + ++  GG GY+ E  IA+ Y  +    I  G+   M + +   L
Sbjct: 323 IAKMWGSDKQVEVTDKCLQLFGGYGYMMEYPIAQMYAAARVQKIYGGTNEIMKVLIARSL 382


>gi|294812777|ref|ZP_06771420.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326441272|ref|ZP_08216006.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294325376|gb|EFG07019.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 388

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 146/405 (36%), Gaps = 45/405 (11%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR----------SIHDGLHCSIWDRSFE 125
           + +  TP+        E++      PA   L  R              GL    +   + 
Sbjct: 3   LDHRLTPEHEELRRTVEQFAHDVVAPAIGDLYERHEFPYGIVAEMGRMGLFGLPFPEEYG 62

Query: 126 PVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +     A  I    L  +    A  L +     A  +    T    + W PK+ S E  
Sbjct: 63  GMGGDFLALGIALEELARVDSSVAITLEAGVSLGAMPLYRFGTEEQKRRWLPKLCSGEM- 121

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD-- 241
                           GLTE  GG+D     +   +    G + ++G K F+++  +D  
Sbjct: 122 ------------LGAFGLTEPEGGSDAGGTRTTAVRDEAAGEWVINGSKCFITNAGTDIT 169

Query: 242 AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
             + +  V GR   G  L+  ++      G       +K+G  ++ T EL F      L 
Sbjct: 170 GLVTVTAVTGRTPEGKPLISSIIIPSGTPGFTVAPAYSKVGWNASDTRELAFDGVRVPLA 229

Query: 300 GDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353
             +     G  + ++I   LD   +++S +   LA     E++ YAR+RH  G  +    
Sbjct: 230 NLVGEEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVAYARQRHAFGRPIGANQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+ +    A       A+     +   ++AA A       K +   +A     
Sbjct: 287 SIQFKIADMEMRAHMARVGWRDAASRLVLGEPFKKQAALA-------KLYSSTVAVDNAR 339

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 340 DATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 384


>gi|196013239|ref|XP_002116481.1| hypothetical protein TRIADDRAFT_30874 [Trichoplax adhaerens]
 gi|190581072|gb|EDV21151.1| hypothetical protein TRIADDRAFT_30874 [Trichoplax adhaerens]
          Length = 604

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 82/464 (17%), Positives = 169/464 (36%), Gaps = 54/464 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRV 170
             G       + +  +  K+    R + +     L     M+         + L    + 
Sbjct: 88  ELGALGMQAPQEYGGMQLKRTQYARISEIIGSFDLSIAVFMAGHQAIGYKGIVLFGNEQQ 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
            + + P + +                     LTE   G+D  +I S      DG  Y L+
Sbjct: 148 KQKYLPSLATG-------------DKIAAFCLTEPSAGSDANSIRSTAVLDDDGKHYILN 194

Query: 230 GHKWFLSSP-MSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G+K ++S+  ++D   + AQV     +       V   + +    G+     + K+G RS
Sbjct: 195 GNKIWISNGGIADVMTVFAQVPIKKNDSDKESQAVTAFIVERDFGGVTSGPPEKKMGIRS 254

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IH 337
           + T  + F +    +    NV     E  K+ +  L+    ++      +        I 
Sbjct: 255 SNTTAVYFDDVKIPV---ENVIGKVGEGFKVAMNILNEGRYAMGATMTGIIRTLMTKTIE 311

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           +A+ R   G  LI+   ++  IA + L   A  ++++ ++N+ D   K    EAA     
Sbjct: 312 HAKNRVQFGRHLIEYQSIQEKIAQMGLTHYAVESVAYAVSNNMDRGIKEFQVEAA----- 366

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-L 455
             I+K    + A  V  + ++ + G G++ E    R  R++    I  G+ + +   + L
Sbjct: 367 --ISKVLSSESAWKVSDDCIQILAGMGFMRENQAERFMRDARVCRIFEGANDVLRQFIAL 424

Query: 456 NLLEKGTNLFEQLFSTLEQ---DLGSSGKKVITILRDSISLCKEDKGL----------AR 502
           N ++      ++L   L+Q   + G+   + +   +  I      + L          A+
Sbjct: 425 NGIQYAGKNMKELQKALQQPISNFGTLWNQGVKRSKRLIGKADSQELLEVTAPELSDCAK 484

Query: 503 FLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
            +T++I    +     L + G N +   F+  R  +     + M
Sbjct: 485 MITQRIEEFGATIEKILIQHGRNIVDQQFILTRIANATIDIYSM 528


>gi|302383676|ref|YP_003819499.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194304|gb|ADL01876.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 594

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 79/424 (18%), Positives = 153/424 (36%), Gaps = 56/424 (13%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P +     +    G        S       +A ++ A      A +  G     S+ +  
Sbjct: 75  PGFADAYSQFAAGGWTGLAAPASAGGQALPKALELAAFETVHAANMAFGLCPMLSLAAIE 134

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T      + P++ S E+                + LTE + G+D+ A+TS    
Sbjct: 135 ALEAHGTEHQKTAYLPRMVSGEW-------------TGAMCLTEPQAGSDLGALTSTATP 181

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED---------- 264
             DG Y L+G K +++    D       ++LA+  +   G   +   L +          
Sbjct: 182 NGDGTYSLTGQKIYITWGDHDATDNIVHMVLARLPDAPAGPKGISLFLANKFLVKADGTL 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N      +++K+G  ++ T  +++      L+G  N     +  M     +   +  
Sbjct: 242 GDRNAFRPVGIEHKLGIHASPTCVMQYEGATAELVGRPNEGLAHMFTMMNAARVGVGMEG 301

Query: 325 VSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATALSFRL 376
           V     +   A+ YA  R           G  + D P ++R ++ +   I AA A+    
Sbjct: 302 VGIADRAYQHALAYALDRRQGRSVWTGEAGAPIFDHPDVRRTLSVMKAKIEAARAICLST 361

Query: 377 ANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
             + D A+  +     A        + PI K W       + ++ ++  GG G++EE   
Sbjct: 362 GVAADMARHAATPEMRAHWKGREDLLTPIAKAWSTDAGVEIASQGVQIHGGMGFVEETGA 421

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           A+ YR++    I  G+     +D++                L QD G+S K VI  ++ +
Sbjct: 422 AQFYRDARIAPIYEGTNGIQAMDLVG-------------RKLSQDGGASAKAVIAEMKAT 468

Query: 491 ISLC 494
           ++  
Sbjct: 469 LTDL 472


>gi|319951477|ref|ZP_08025286.1| acyl-CoA dehydrogenase-like protein [Dietzia cinnamea P4]
 gi|319434869|gb|EFV90180.1| acyl-CoA dehydrogenase-like protein [Dietzia cinnamea P4]
          Length = 404

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 139/414 (33%), Gaps = 44/414 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             +  +L+ L        A   A +     P L  +   G   D+            ++ 
Sbjct: 28  PWMTDDLDAL-------RAHTRAFLEKETAPHLERWAEQGA-VDR--------EFWNKAG 71

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+   A     A  +       S   A  +    T    
Sbjct: 72  DAGLLCISIPEEYGGGGGSFAHEAVIAEEQTRALDDGWANSVHSTIVAHYILQYGTQEQK 131

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E                 + +TE   G+D+ A+ +   +  D     +G 
Sbjct: 132 QRWLPKLATGEM-------------VGAIAMTEPGAGSDLQALRTTATRDGDDFVV-NGS 177

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+S+ M    +++    G  G   +  L+ E     G    R  +KIG +   T+EL 
Sbjct: 178 KTFISNGMHCDLLVIVARTGGEGAQGLSLLVAETPGLEGFNRGRKLDKIGLKYQDTMELF 237

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           F +        L       +    L+       L  A+ +V+    ++  A  YA+ R  
Sbjct: 238 FDDMRVPAGNILGGEGQEGQGFIQLMQQLPQERLIIAVTAVAAAETAVRLATDYAKEREA 297

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++    ++  +A+   +  AA  L        D   S   +       A + KY+C
Sbjct: 298 FGKPILKFQNLRFELAECKTEALAARTL-------LDHCISLHLKGELDPATASMAKYYC 350

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 +I   ++  GG G++ E  IAR Y  +    I  G+   M   +   L
Sbjct: 351 TDKQCEIIDRCLQVFGGYGFMTEYPIARMYASARVQKIYGGTNEIMKELISRTL 404


>gi|298369590|ref|ZP_06980907.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282147|gb|EFI23635.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 595

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 88/446 (19%), Positives = 158/446 (35%), Gaps = 54/446 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHPAWHALLR 108
               E L    +     E AR A+    Q       G+ +      D +  HP       
Sbjct: 26  LPHAEGLDAETVDAVLDEAARFASE---QWADTNRTGDLYGAGFSDDLITTHPDLAHAYD 82

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G         F               ++  A L    +   ++ +   +    + 
Sbjct: 83  DFCEAGWAGLRAPTEFGGQGLPAVVSAACEEMWCAANLALSLMPMLTLGAVDALFKHGSE 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PK+ S E+  T             + L+E + G+D+  I ++     +G Y L
Sbjct: 143 EQKQTYLPKMCSGEWAGT-------------MNLSEPQAGSDLNHIATRAVPKENGAYAL 189

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
           SG K F++    +       ++LA++         V  F+VP+ L +     G  NG+  
Sbjct: 190 SGQKIFITWGDQEMTENIVHLVLARLPDAAPGVQGVSMFIVPKYLVNADGSLGGRNGVRA 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +++K+G  ++ T  +EF N  G+L+G        +  M     L+  I   +    + 
Sbjct: 250 IGIEHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTMMKTARLNVGIEGHAVAERAY 309

Query: 333 AEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFR------LA 377
             A+ YA+ R   G           +I  P ++R +      +AA  AL  R       A
Sbjct: 310 QNALAYAKERVQ-GRDEADGSDDVAIIRHPDVRRMLLIQKATLAAQRALYLRAAALTDFA 368

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +  +   R E       + PI K W       +   A++  GG+GY+EE  +A++ R+ 
Sbjct: 369 AACPDNVLRKEAERELDFLIPIVKAWLTDNGVVLTNLAVQIYGGAGYVEESGVAQYLRDV 428

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
               I  G+      D+      G N
Sbjct: 429 RITPIYEGTNGIQAADLAGRKTTGKN 454


>gi|119714538|ref|YP_921503.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535199|gb|ABL79816.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 381

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 140/376 (37%), Gaps = 33/376 (8%)

Query: 94  WDKVEFHPAWHALLR----RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             +VE H A  A+ R     +   G         +        ++  A  L  + ++ A 
Sbjct: 26  IPQVEQHAADKAIPRDFWTEAGRQGFLGLEIPEEYGG-AEAGDYRFNAVLLEELNKVNAA 84

Query: 150 HLMSPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                 + +   A  +  + T    + W P + + E             V + +G+TE  
Sbjct: 85  LGSCVGIHADITAPYLVELGTDEQKQRWLPGVAAGE-------------VLLAIGMTEPS 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDG 265
           GG+D+AA+ +   K  D  + ++G K F+++   +D  ++ A+         +     + 
Sbjct: 132 GGSDLAALKTTAVKDGD-SWVINGSKTFITNGYSADLVLVAARTSPEKKARGITLFAVES 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAI 322
           +  G    R  +KIG   + T EL F N        +    G    M        L  AI
Sbjct: 191 TAPGYSRGRKLDKIGQDESDTAELFFENVRVTDAEIVGELDGGFIHMMQKLPQERLGCAI 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V+  +  L E + YA+ R   G  +      K  +A++   I    A   +   +   
Sbjct: 251 SNVAHAKQILLETLQYAKDRKAFGQGIGSFQYNKFLLAELFTRIEVTEAFIDQCVVAHAA 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A+        W  ++   V+   ++  GG GY+ E  +AR +R++  + I
Sbjct: 311 GELTPIDAAKAKW-------WSSQVQNEVLDHCVQLHGGYGYMNEYRVARAWRDARVSKI 363

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   L
Sbjct: 364 WAGSNEIMKELIGRDL 379


>gi|325285451|ref|YP_004261241.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324320905|gb|ADY28370.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 389

 Score =  243 bits (620), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 13/302 (4%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
             A+     +      K   +       AP         L +TE  GG+D+A + +  +K
Sbjct: 86  AAAMWAHAYLAMTHVNKEGDKAIKDNYLAPSVAGEKIGCLCVTEPFGGSDVAGMRTTAEK 145

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G K F+++ + +D  ++ A+    +G   +   + D +  G+   +L NK+
Sbjct: 146 KGD-TYVLNGSKTFITNGVYADYMVVAAKTSPELGNKGISIFMVDKNTVGVSASKL-NKL 203

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R++ T E+ F N       L+G+       +     L  L   + + +    +L  A 
Sbjct: 204 GWRASDTAEIAFDNVTIPAANLMGEEGKGFSYIMQHFALERLVMGVNAHARAEFALDYAR 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +     ++   +D+  D+      ++ +A   ++ +   +E       
Sbjct: 264 QYMSERSTFGKTIDKYQALRHTYSDLYADMEICREYNYSVAYRLNKGEYVVKE------- 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I+K    KMA  VI   ++ +GG GY+E+  +AR  R+S    I  G+   +   +  
Sbjct: 317 ATISKLKSTKMADEVIYGCLQFLGGYGYMEDYPMARMLRDSRLGPIGGGTSEILREIIAK 376

Query: 457 LL 458
           ++
Sbjct: 377 MV 378


>gi|320007292|gb|ADW02142.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 380

 Score =  243 bits (620), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 121/360 (33%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               R +   GL        +         +    A  +  A +    L   +      +
Sbjct: 40  REAWRAAGRQGLLGLAVPEEYGGGGNTDFRYSAVLAEEFTRAGVSGLALGLHNDIIGPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             + T    + W P   S E                 + +TE   G+D+  I +  +   
Sbjct: 100 TGLGTEEQKRRWLPGFCSGE-------------TITAIAMTEPGAGSDLQGIRTAAEDKG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + L+G K F+S+ + +D  I++A+     G   +  L+ +    G    R  +KIG 
Sbjct: 147 DH-WLLNGSKTFISNGILADLVIVVAKTSPEGGAKGLSLLVVERGAEGFERGRNLDKIGQ 205

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHY 338
           +S  T EL F +        L    G    +        +  A+  ++     L     Y
Sbjct: 206 KSQDTAELFFDDVRVPKENLLGELDGAFVHLMTNLAQERMGIAVAGIAAAEHLLEITTRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  L     ++  IA++A + A             D       E     + A 
Sbjct: 266 VKEREAFGRPLSKLQHIRFEIAEMATECAVTRTF-------LDRCIVDHSEGTLDAVHAS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K+W  ++   V    ++  GG GY+ E  +A+ Y +    +I  G+   M   +   L
Sbjct: 319 MAKWWATELQKRVADRCLQLHGGYGYMTEYRVAKAYTDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|302521666|ref|ZP_07274008.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302430561|gb|EFL02377.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 472

 Score =  243 bits (620), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 137/373 (36%), Gaps = 35/373 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D  E H   + ++R     GL    +   +  +         A           A  L +
Sbjct: 32  DYYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGLALEELARVDSSVAITLEA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  + L  T    ++W P++ + E             +    GLTE   G+D   
Sbjct: 92  GVSLGAMPIHLFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGG 138

Query: 214 ITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPN 268
             +          + ++G K F+++  +D    + +  V GR   G   +  ++      
Sbjct: 139 TRTTAVLDEATNEWVINGSKCFITNSGTDITGLVTVTAVTGRKDDGRPRISSIIVPSGTP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSG 327
           G       +K+G  ++ T EL F +        L  +  G  + ++I   LD   ++++ 
Sbjct: 199 GFTVAAPYSKVGWNASDTRELSFQDVRVPAANLLGELGRGYAQFLRI---LDEGRVAIAA 255

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +   LA     E++ YA+ RH  G  +     ++  IAD+ L    A       A+    
Sbjct: 256 LATGLAQGCVDESVAYAKERHAFGKPIGANQALQFKIADMELRAHTARLSWRDAASRLVR 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            ++  +EAA A       K +   +A     +A +  GG G++ E  +AR +R++    I
Sbjct: 316 GEAFKKEAALA-------KLYSSTIAVDNARDATQVHGGYGFMNEYPVARMWRDAKILEI 368

Query: 443 LLGSGNAMVLDVL 455
             G+     + + 
Sbjct: 369 GEGTSEVQRMLIA 381


>gi|254390828|ref|ZP_05006039.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444439|ref|ZP_08219173.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197704526|gb|EDY50338.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 385

 Score =  243 bits (620), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 141/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +RW+K         L R++   GL        +         +        + A++ 
Sbjct: 32  PHHDRWEKEGIVD--RELWRKAGAAGLLGMDAPTEYGGGGEPDFRYPAVFTEELIRARVT 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++ +   AS +A+ TTP   + W P + S E             +   + ++E   
Sbjct: 90  VPGFVAHNDVVASYLAVRTTPEQRRRWLPGLCSGE-------------LVAAIAISEPDA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+++A I +   +  D  Y L+G K F+++   +D  ++ A+   + G   +   + +  
Sbjct: 137 GSNVADIRTTAVRDGDH-YVLNGQKVFITNGENADLVLVAARTAPQRGGQGLSLFVVERG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G        K+G  ++ T EL F         L+G  +     +        L  A +
Sbjct: 196 TAGFARGNRLEKLGWNASDTCELFFDGCRVPADNLVGKEHAGMAYLMTGLPRERLSIATV 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     L +A+ YAR+RH  G  +      +  +A +  ++  A           +  
Sbjct: 256 AVAACEQMLEDALAYARQRHAFGQAIGSFQHNRFQLATMDTEVTIARVFLDHCVTQINAG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        +   A   K+W  ++   +   A++  GG GY++E  I+R +  S   +I 
Sbjct: 316 R-------LSAADAAKAKWWTTELQVEISNRAVQLHGGYGYLKESPISREWANSRVQTIY 368

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 369 GGTTEIMKEMIGRSL 383


>gi|226308745|ref|YP_002768705.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229488635|ref|ZP_04382501.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|226187862|dbj|BAH35966.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229324139|gb|EEN89894.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 393

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 133/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             +   +  +G        ++          + + A  L   +   A      +   A  
Sbjct: 52  REIWLEAGRNGFLGLEVPEAYGGSEAGDYRFNAVLAEELSRASAAVASSFGIHADVVAPY 111

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  +TT    + W PK  + E                 +G+TE  GG+D+A++ +   K 
Sbjct: 112 LVQLTTEEQKQRWLPKFCTGEM-------------LTAIGMTEPSGGSDLASLKTTAVKD 158

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + ++G K F+++   +D  I+ A+         +     +    G    R  +K+G
Sbjct: 159 GDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLDKVG 217

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              + T EL F N       ++G+++     + +M     + +A+ +++     L E + 
Sbjct: 218 QHESDTAELFFENVRVPSTNIIGEIDRGFIHMMEMLPQERVGAAVSNIAHAAPILEETLQ 277

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +      K  +AD+   I    A       +    +  + +AA A+   
Sbjct: 278 YAKDRKAFGQPIGSLQWNKFLLADLVTRIEVTQAYVDNCVAAHAAGELTAIDAAKAKW-- 335

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M   +   
Sbjct: 336 -----WTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIMKELIGRD 390

Query: 458 L 458
           L
Sbjct: 391 L 391


>gi|271964937|ref|YP_003339133.1| acyl-CoA dehydrogenase-like protein [Streptosporangium roseum DSM
           43021]
 gi|270508112|gb|ACZ86390.1| acyl-CoA dehydrogenase-like protein [Streptosporangium roseum DSM
           43021]
          Length = 404

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 134/387 (34%), Gaps = 36/387 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G  WD+ E  P    +++ +   GL+   +              +    L+       
Sbjct: 31  PAGAEWDEREETP--WPVIQEAAKIGLYSLDFFAQQWFEPSGLGLTVAFEELF-WGDAGI 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  +A+ ++   TP    +W P++F    D                  +E   G
Sbjct: 88  GLSIVGTGLAAAALSAGGTPEQMGEWLPQMFGTPEDVR----------LGAFCASEPDAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+ AI ++     D         W  +  ++D  I++A V+  +G       +      
Sbjct: 138 SDVGAIRTRAVPSGDDWILDGVKTWATNGGIADVHIVVASVDPSLGTRGQASFIVPPGTA 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST---------------GPVEDMK 313
           GL   R   K G R++ T E+   N        L                   G    M+
Sbjct: 198 GLAMGRKFRKHGIRASHTAEVILDNVRVPGSCLLGGREKLDARLARVRSGERAGEQAAMR 257

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                    A M+V   R     A  YAR R   G  + +   +   +AD+A  +  A  
Sbjct: 258 TFETTRPSVAAMAVGIARAGYEYARDYAREREQFGRRIGENQAIAFLLADMATRVDVARL 317

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++R A      ++  +          + K    + A  V  +A++ +GG+GY  E  + 
Sbjct: 318 MTWRAAWMARNNRAFGQA------EGSMCKLVAGEAAVWVTEQAIQILGGAGYTREHPVE 371

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R +R++   +I  G+     L +   +
Sbjct: 372 RFHRDAKIFTIFEGTSEIQRLIIGRAV 398


>gi|197246590|gb|AAI68801.1| Unknown (protein for IMAGE:7855999) [Xenopus (Silurana) tropicalis]
          Length = 633

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 85/480 (17%), Positives = 169/480 (35%), Gaps = 61/480 (12%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTS 158
           H      L      G            +        R   +  M  +     L +     
Sbjct: 105 HRVEDKTLAGLKEMGAFGLQVPTELGGLGLNNTQYARLVEIVGMHDMGVGITLGAHQSIG 164

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              + L  T      + P++ S E                   LTE   G+D A+I +  
Sbjct: 165 FKGILLFGTAEQKAKYLPRLASGE-------------TIAAFCLTEPTSGSDAASIRTAA 211

Query: 219 QKISDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLC 271
           +K   G Y     G  W  +  ++D F + A+    +   G     V   + +    G+ 
Sbjct: 212 RKSPCGKYYTLSGGKIWISNGGIADVFTVFAKTPVQDPATGETREKVTAFIVERG-EGVT 270

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG--- 327
           +   + K+G R++ T  + F           NV  G     K+ +  L++    ++    
Sbjct: 271 HGPPEKKMGIRASNTAAVFFDEVRVPA---ENVLGGEGNGFKVAMNILNNGRFGMAAALS 327

Query: 328 --MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+  +  A+ +A  R   G  L    +++  +A +A+      ++++ ++ + D    
Sbjct: 328 GTMKGMIQRAVEHATSRTQFGSKLHQFGIIQEKLARMAVLQYVTESMAYMISANMDSGHK 387

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   +I A I+K +  + A +V  E ++ +GG+G++ +  + R  R+     I  G
Sbjct: 388 D------FQIEAAISKIFGSEAAWSVTDECIQILGGTGFMTDGGVERVLRDLRIFRIFEG 441

Query: 446 SGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           + + + L V L  ++      + L   L   LG+S      +LR+ +   +   GL+  L
Sbjct: 442 TNDILRLFVSLQGMQSAGKELKSLQKALSNPLGNSSL----LLREGMKRVRRKAGLSSGL 497

Query: 505 T---------EKIALASSAAA----------LYRAGMNDIADVFLENRFLDNCHSTHCML 545
           +         EK    + AA           L + G   + + F+  R  D     + M+
Sbjct: 498 SLKGQVHPELEKSGELAVAALEDFGGTVEEVLVKYGKRIVDEQFVLQRVADCAIDLYAMI 557


>gi|311103476|ref|YP_003976329.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758165|gb|ADP13614.1| acyl-CoA dehydrogenase, middle domain protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 593

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 98/557 (17%), Positives = 201/557 (36%), Gaps = 84/557 (15%)

Query: 30  LFIGMNAYSS-----DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
               ++  ++     D  L    +   + + + + L  E         L R+ +    +L
Sbjct: 7   PLHDIDFLTTAVFPLDPHLQRCGSALDAGLARSVVLEAEKFAQGLLDPLNRVGDQQGCRL 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H  G        V     +    R     G +       +               ++   
Sbjct: 67  HEGG--------VSTPAGFQQAYRAFCEGGWNGLRQPEQYGGQGLSCVLSTLTEEIWHAC 118

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                     +  +   +    +P +     P++ S E+  T             + LTE
Sbjct: 119 NPSFALCAMLTGGAIETLLHAASPALKDQLLPRLISGEWTGT-------------MNLTE 165

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGCFLV 258
              G+D+ A+ ++   + DG Y +SG K F++    D       ++LA+  +   G   +
Sbjct: 166 PAAGSDLGAVRTRATPLEDGSYAISGQKIFITYGDHDLASNIIHLVLARTPDAPAGAKGL 225

Query: 259 PRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVS 305
                           G+ N +    L++K+G  ++ T  ++F       G+L+G+LN  
Sbjct: 226 SLFAVPKYLIQDDGSPGARNDVHCSALEHKLGIHASPTAVMQFGAGQGATGYLVGELNQG 285

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMK 356
              +  M            ++    +   A+ YAR R   G           ++  P ++
Sbjct: 286 LMNMFVMMNEARCAVGNQGLAVAERAFQHAVWYARERSQ-GKVVGEEGAALPILRHPDVR 344

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPA 410
           R +  +   I +  AL   L+   D A +      RS   A   ++ P+ K W  + A  
Sbjct: 345 RLLLSMKSRIESMRALGMYLSMQRDLAHAGADLEVRSRAQARIDLLIPVMKGWFTETAQR 404

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-------------L 457
           +  +A++  GG G+IEE   A++YR++   +I  G+      D+L              L
Sbjct: 405 ITYDAVQVFGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLLGRKTVRDSGAQATLL 464

Query: 458 LEKGTNLFEQLF--STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE-KIALASSA 514
           L++ + L E +   +   ++ G S ++  T LR++I+   E     R   + +   A + 
Sbjct: 465 LDEISQLAEAMLAGAAPAREFGRSLRQGCTHLRETIAWLLE-----RHAADPRATHAGAV 519

Query: 515 AALYRAGMNDIADVFLE 531
           + L   G+  +A  +++
Sbjct: 520 SYLELWGL--VAGAWMQ 534


>gi|148554914|ref|YP_001262496.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148500104|gb|ABQ68358.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 390

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 118/361 (32%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R +   GL        +                          +   +   A  + 
Sbjct: 48  RDTWRAAGEAGLLGLSVPVEYGGAGVDFTFDAVIMEQLGRHHALNFAIPLHNAVVAPYIV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W P + + E               + + ++E   G+D+ A+ +  ++  D
Sbjct: 108 SYANEEQKRRWLPGVVTGE-------------TILAVAMSEPGAGSDLQAMKTSARREGD 154

Query: 224 GIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGN 281
             Y ++G K F+S+       I+ A+ +   G   +    +E     G    RL +KIG 
Sbjct: 155 H-YVINGQKTFISNGAHASLIIVAAKTDPEAGARGLSLFAVETDEVEGFTRGRLLDKIGQ 213

Query: 282 RSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
               T EL FS+    +   +G        + +      L  A  +++ M  ++   I Y
Sbjct: 214 EGRDTAELFFSDMRVPVENRIGPEGGGFAMLMEKLPQERLVIAWQALAMMEAAIDHTIAY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  ++D    +  +A+       A           D    +          A 
Sbjct: 274 TAERRAFGRAVLDFQNSQFKLAECKTQATIARVF-------LDHCTQQLLAGTLDAATAS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + KYW  +    VI E ++  GG GY+ E  IA  Y+++    I  G+   M L +   L
Sbjct: 327 MAKYWITEAQGKVIDECLQLFGGYGYMTEYPIAEMYKDARVFRIYGGTSEIMKLLIARSL 386

Query: 459 E 459
            
Sbjct: 387 R 387


>gi|33595280|ref|NP_882923.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565357|emb|CAE36160.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 385

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 150/376 (39%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  + W+     P    ++RR    G+    +  S+          +  A     +    
Sbjct: 32  PHAQAWEHDGHTP--RPVIRRMGELGMLGMRFPESYGGADADTVASVVFAEELGRSTFGG 89

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +++ + T++  +A + TP+    + P I   E               + + +TE  
Sbjct: 90  FAITILTQTDTASPPIAAVGTPQQKARYLPAIVRGEC-------------LVAIAMTEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDG 265
            G+DIA + ++  +  D         +  +   +D +++ A+ +        V   L D 
Sbjct: 137 VGSDIATLRTRAVRDGDEWVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLVDK 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              GL  +R  +K+G +S+ T +L F       G LLG  N     +        L  A 
Sbjct: 197 GTPGLRVERRLDKMGWKSSDTAQLSFDGCRVHAGALLGKPNRGFAALMRNVQNERLVLAA 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++ G + ++A+ + Y R R   G  L D+  ++  +A +A  + +A    + +A     
Sbjct: 257 QALGGSQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSVAALDAR 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E +  + +       C ++   V+ + ++  G +GY++  ++ R YR++  ++I
Sbjct: 317 GVECVKEVSMIKAL-------CGELVNEVMDDCVQFHGATGYMQGTAVERMYRDARVHAI 369

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+ +V   +
Sbjct: 370 GGGATEIMLEEVAKRM 385


>gi|119718292|ref|YP_925257.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119538953|gb|ABL83570.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 127/360 (35%), Gaps = 27/360 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL        +  +                  +    ++     +  ++A+  T    
Sbjct: 47  AMGLFGITVPEEYGGLDLDPVAFALVFEEIARGWMGIAGILGSHSLACRLIAMHGTEEQR 106

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P + +              +   G+GLTE   GTD+  I +  +   D        
Sbjct: 107 QMYLPDLATG-------------ARRTGIGLTEADAGTDLQGIRTTARLDGDHYVVNGAK 153

Query: 232 KWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            W  ++  +D   +L + +         +  LL +    G    +   K+G +   + E+
Sbjct: 154 MWITNARYADPLPVLVKTDPSASPAHRGMSVLLIEADTPGYEVTKDIPKLGYKGTESCEI 213

Query: 290 EFSNTFGFL----LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
              +    +     G        V        ++ A  SV   + +  EA+ YA++R   
Sbjct: 214 RLDDVRVPVSQLVGGVEGRGMQQVLSALEWGRVNIAARSVGIAQRAHDEALAYAQQRKAF 273

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D   ++  + ++   + AA  +++  A++  + +        A     + K +C 
Sbjct: 274 GKPIADFQAIQLKLGELGTQVQAARLMAYWAADAVRQGR--------ADGATGMAKIFCS 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ++A     +AM+  GG GY  E  + R YR++   SI  G+ + +   V   L KG  + 
Sbjct: 326 EVALNAAIDAMKVHGGYGYSTEFEVERLYRDAILMSIGEGTNDVLRTVVAKSLVKGETVV 385


>gi|257389147|ref|YP_003178920.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257171454|gb|ACV49213.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 380

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 137/377 (36%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  +     PA   +  +     +     D  +  +   Q  + +    L  ++   
Sbjct: 26  PIAQEIEDEHRFPA--EIFDQLAELDVMGVPIDEEWGGLGGDQLMYALVTEELGRVSGSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +    ++  + L  T    + W   +   EY               G  LTE   
Sbjct: 84  GLSYAAHVSLASKPIELFGTDDQRERWLRPLAEGEY-------------LGGWALTEPES 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           G+D + +++   +  D        ++  ++ ++ + ++ A  E   G   +   L D  +
Sbjct: 131 GSDASDMSTTATREGDEWVLDGTKQFITNASVAGSLVVKAVTEPDAGYDGISTFLVDPEA 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            +G        K+G  ++ T E+ F +        L       E  K    LD   +S++
Sbjct: 191 DDGFEVTTEWEKMGLNASPTCEIRFDDCRIPADRMLGEPGDGWEQTK--KTLDGGRISIA 248

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + V LA+     A+ YA+ R   G  + +   ++  + ++   I  A  L+ + A  +D
Sbjct: 249 ALSVGLAQGAFEAALEYAKEREQFGQPIGEFDAVRDMLVEMDRKIERARLLTHKAATKYD 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +     ++ A++ A        ++   V  +A++ +GG GY  + +  R YR++    
Sbjct: 309 AGEDVGRLSSMAKLDA-------SEICREVAEDAVQVLGGYGYTTDFAPQRFYRDAKLME 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   L
Sbjct: 362 IGEGTSEIQRLVLGREL 378


>gi|294816099|ref|ZP_06774742.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294328698|gb|EFG10341.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 379

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 141/375 (37%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +RW+K         L R++   GL        +         +        + A++ 
Sbjct: 26  PHHDRWEKEGIVD--RELWRKAGAAGLLGMDAPTEYGGGGEPDFRYPAVFTEELIRARVT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               ++ +   AS +A+ TTP   + W P + S E             +   + ++E   
Sbjct: 84  VPGFVAHNDVVASYLAVRTTPEQRRRWLPGLCSGE-------------LVAAIAISEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+++A I +   +  D  Y L+G K F+++   +D  ++ A+   + G   +   + +  
Sbjct: 131 GSNVADIRTTAVRDGDH-YVLNGQKVFITNGENADLVLVAARTAPQRGGQGLSLFVVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G        K+G  ++ T EL F         L+G  +     +        L  A +
Sbjct: 190 TAGFARGNRLEKLGWNASDTCELFFDGCRVPADNLVGKEHAGMAYLMTGLPRERLSIATV 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     L +A+ YAR+RH  G  +      +  +A +  ++  A           +  
Sbjct: 250 AVAACEQMLEDALAYARQRHAFGQAIGSFQHNRFQLATMDTEVTIARVFLDHCVTQINAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        +   A   K+W  ++   +   A++  GG GY++E  I+R +  S   +I 
Sbjct: 310 R-------LSAADAAKAKWWTTELQVEISNRAVQLHGGYGYLKESPISREWANSRVQTIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 363 GGTTEIMKEMIGRSL 377


>gi|239927853|ref|ZP_04684806.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291436194|ref|ZP_06575584.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291339089|gb|EFE66045.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 401

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 119/362 (32%), Gaps = 35/362 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  ELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINTHFIVAYMLKQHGTQEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + P+             M    V     ++E   G+D++AITS+  K  D        
Sbjct: 112 DHFLPR-------------MAAGDVRGAFSMSEPGLGSDVSAITSKAVKDGDEYVLSGQK 158

Query: 232 KWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP------NGLCYQRLKNKIG 280
            W  +   S    +L + +     G      +   L +  P       GL      +K+G
Sbjct: 159 MWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGFGEVRPGLTIPGKIDKMG 218

Query: 281 NRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +   T EL            L G        + D   +  ++ A       + +    +
Sbjct: 219 YKGVDTTELIMDGLRVPADRVLGGVTGRGFYHMMDGVEVGRVNVAARGCGVAQRAFELGV 278

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++RH  G  +     ++  +A++A  + AA A+    A   D  +    EA  A+ +
Sbjct: 279 RYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMAKYL 338

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        +    V+ ++    GG G+ +E  I R YRE+P   I  G+     + +  
Sbjct: 339 A-------SEYCKEVVEDSFRIHGGYGFSKEYEIERLYREAPMLLIGEGTAEIQKMIIGR 391

Query: 457 LL 458
            L
Sbjct: 392 RL 393


>gi|119505687|ref|ZP_01627757.1| Butyryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119458499|gb|EAW39604.1| Butyryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 382

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 149/399 (37%), Gaps = 34/399 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
               Q LA +  +   +L         +D+ + +P    L+ +    GL  +     +  
Sbjct: 6   DTEQQILATIDKWVERELRPI---AREFDQADEYP--KELVEQMKTLGLFGATISEQYGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +        +         +    + +  +  A+ V    T    + + P+  + E    
Sbjct: 61  LGLSATTYAKIVSRICEVWMAPSGIFNSHLIMANCVERGGTQAQKEYFLPRFATGE---- 116

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-M 245
                    +  G+GLTE   G+D+ +I  Q ++  D  Y L+G K ++S+ ++   + +
Sbjct: 117 ---------LRGGIGLTEPDAGSDLQSIRLQAKRQGDH-YILNGTKTWISNGINGNCLAV 166

Query: 246 LAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
           L +    +      +   L +   +G    +   K+G R+  + EL F +        + 
Sbjct: 167 LTKTNPDIEPRHRGMSLFLCEKG-DGFSVGKKLKKLGYRAIDSAELIFDDFHVSADNLIG 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       V     L  ++ A       + +   A+ YA  R   G  + +   ++  +
Sbjct: 226 GEEGRGFQQVAGGLELGRINIAARGAGMAKGATDMALRYAMERKTFGKPIAEHQAIQLKL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+++   +AA  L  + AN FD+ +    EA  A       K++  + A     +AM   
Sbjct: 286 AEMSTRASAAELLVKQAANKFDQGERCDLEAGQA-------KFFASESAVQNSLDAMRVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG  Y  E  I R YR++P   I  G+     + +   +
Sbjct: 339 GGYSYSPEYEIERFYRDAPLLCIGEGTNEIQRMIIAKQM 377


>gi|254486410|ref|ZP_05099615.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214043279|gb|EEB83917.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 384

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 134/392 (34%), Gaps = 35/392 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A   TP    +   G R  +     AW    R++  +GL C+     +          + 
Sbjct: 23  AEEITPHHAQWEKDG-RVSR----DAW----RKAGENGLLCAAMPEEYGGAGADFLFSMV 73

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
                  A          S   A  +    +  V ++W PK             M     
Sbjct: 74  VMEELAAAGAMGPGFSLHSDIVAPYILHYGSDAVKQEWLPK-------------MAAGEA 120

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGC 255
              + +TE   G+D+  I +   +  D  Y ++G K F+++  +   ++LA + +  +G 
Sbjct: 121 IGAIAMTEPAAGSDVQGIKTTAIRDGDD-YVINGQKVFITNGGNCDIVVLACKTDPALGA 179

Query: 256 FLVPRLLEDGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
                LL      G      L  KIG ++  T EL F N       LLG        + +
Sbjct: 180 KGTSLLLVPADTPGFRKGSQLLEKIGWKAQDTAELFFDNVRVPATNLLGAEGRGFYQLME 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L   + + + +  +L   I +   R   G  + D    +  +A+I         
Sbjct: 240 QLPQERLLQCVRATAALEAALQWTIDHVTERKAFGKTIADFQNTRFKLAEIKAQSVLMRV 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + +        +  + +AA  +++   T   C       + + ++  GG GY+ E  IA
Sbjct: 300 FTDKCLELHVAGELDAVDAAMGKMLTSETLCRC-------LDDLLQMFGGYGYMWEYPIA 352

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           R + ++    I  G+G  M   +   +  G  
Sbjct: 353 RAWADARVGRIAGGTGEVMREIIGRSVLGGRK 384


>gi|158318151|ref|YP_001510659.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158113556|gb|ABW15753.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 381

 Score =  242 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 74/407 (18%), Positives = 138/407 (33%), Gaps = 38/407 (9%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
             + S  A+EL  +          P++  Y     R+ + EF              GL  
Sbjct: 5   RQLPSSEARELIELTATMCDRELAPRVTEYEA-ASRFPREEF--------AVLGKAGLLS 55

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
             +  SF    +     ++               +S    S   +A   TP   ++  P+
Sbjct: 56  LPYPESFGGGEQPYEVYLQVLEEISYRWAAVAVGVSVHALSCYPLATFGTPEQQEEHLPR 115

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S               +     L+E   G+D AA+        DG        W    
Sbjct: 116 LLSG-------------DLLGAYCLSEAHAGSDPAAMRVTATATDDGYLLNGTKAWVTHG 162

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +D + + A+         +   L D     + +   + K+G  ++ T ++ F +    
Sbjct: 163 GAADFYTVFARTSSDT-RGGISCFLVDAGTPNIRFHPPEKKMGLTASPTTQISFDDVAVP 221

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              L+G +               L  A  +V   + +L +A+ YA+ R   G  +ID   
Sbjct: 222 ASRLIGKVGQGLSIALSALDSGRLGIAATAVGLGQRALDDAVAYAKEREAFGKAIIDHQG 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  + +A A +   A   D               A + K      A  V  +
Sbjct: 282 LGFLLADMAAAVESARATTLAAARRRDAGLQYGRA-------ASVAKLVATDAAMKVTED 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           A++ +GG+GY ++  + R+ RE+    I  G+     L +   L +G
Sbjct: 335 AVQVLGGAGYTKDFPVERYMREAKVMQIFEGTNQIQRLVISRHLARG 381


>gi|294674690|ref|YP_003575306.1| acyl-CoA dehydrogenase [Prevotella ruminicola 23]
 gi|294472479|gb|ADE81868.1| acyl-CoA dehydrogenase [Prevotella ruminicola 23]
          Length = 575

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 162/433 (37%), Gaps = 43/433 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +  L  +   GL      R +  +          + +   A     ++ S        + 
Sbjct: 92  YENLDATRKAGLWGVSMPRRYGGLNLPNTVFSMLSEMISSADAGFQNIWSLQSC-IDTLY 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
              +    + + P++ + E               + + LTE   G+D+  +  +      
Sbjct: 151 EFGSEEQRQKYIPRVCAGE--------------GMSMDLTEPDAGSDLQRVMLKATFDEK 196

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           +  + L+G K F+++  SD  ++LA+ E G      +   + D    G+  + +++K+G 
Sbjct: 197 ENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDGRGLSMFIYDKRQGGVDVRHIEHKLGI 256

Query: 282 RSNATVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             + T EL + N    L G   +     V  +     L  A  SV   + +  E + YA+
Sbjct: 257 HGSPTCELTYKNAKAELCGSTRLGLIKYVMALMNGARLGIAAQSVGVEQEAYNEGLAYAK 316

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEE- 389
            R   G  +I+ P +   ++ +   + A  +L +  A   D          + K   EE 
Sbjct: 317 ERQQFGDKIINFPAVYDMLSRMKAKLDAGRSLLYETAAYVDIYKCLEDIERDRKLTPEEK 376

Query: 390 ------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A    P+ K    + A     +A+   GGSG+I E    R +R++   SI 
Sbjct: 377 QELKKYQRLADAFTPLAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLFRDARIFSIY 436

Query: 444 LGSGNAMVLDVLNLLEKGT------NLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-- 495
            G+    V+  +  +  GT      ++   L +     L +  +K+I +  ++++  K  
Sbjct: 437 EGTTQLQVVAAIRYITNGTMLNNIKDMLAALPAEANAALKARVEKLIPVYEEALAAVKAL 496

Query: 496 EDKGLARFLTEKI 508
           +++    FL  ++
Sbjct: 497 DNQDAHDFLARRL 509


>gi|94497944|ref|ZP_01304509.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94422672|gb|EAT07708.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 572

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 92/550 (16%), Positives = 198/550 (36%), Gaps = 68/550 (12%)

Query: 65  VLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           + +   +E  +    +   L+      G R     V     + A  +  +  G      D
Sbjct: 36  LATAVLEEAGKFCADHLHPLNRQGDEQGARLVDGSVVMPDGFAAAYQAFVEAGWPSLAAD 95

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                       ++    +   + L  G     +  +   +A   +  +   +   + S 
Sbjct: 96  PDHGGQGLPFILQLWLDEMLSASNLSFGLFPGLTRGAMEAIAAHASDDLKTRYLAPLISG 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                + LTE   GTD+A + ++ + + DG + ++G K F+SS   D
Sbjct: 156 EW-------------TGAMALTESGAGTDLALLKTKAEDLGDGRFAITGQKIFISSGDHD 202

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
                  ++LA++         +  FLVP++L D + N +    L+ K+G  +  T  + 
Sbjct: 203 MASNIVHLVLARLPDAPAGVKGISLFLVPKMLPDDTRNTMSVGALEKKMGIHAQPTCVMN 262

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----S 345
           +    G+L+G+ +     +  M     L   I  +     +  +A  YA+ R        
Sbjct: 263 YDGATGWLVGEPHRGLAAMFTMMNAERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSSDG 322

Query: 346 GG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIM 396
           G     +I+   ++R +  +   + A  AL+   A  +D A+       R++  A   ++
Sbjct: 323 GRGPVAIIEHADVRRMLLKVRAFVEAGRALAGWTALQWDRAQGHADPAIRADADALVALL 382

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K             A +  GG GYI E  + +  R++    I  G+     +D++ 
Sbjct: 383 TPVVKAAFTDFGFESAVAAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVG 442

Query: 457 --LLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKGLAR----------- 502
             L   G  + E+LF  +E DL    G ++   +R+++ L ++     R           
Sbjct: 443 RKLPMAGGTVVERLFDQIEMDLQKCEGVEMAERVRNALGLFRDATIALRGAGADAAGAAA 502

Query: 503 -------------FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
                        ++  ++A  ++  +   A    +A+ F+     ++      +  G  
Sbjct: 503 VDYLRLFALVCLGWMWTRMAAVATGDSPLHASKRALAEFFVLRLLPESEGLARAIGAGEA 562

Query: 550 NAAHIIDSLY 559
           +   +    +
Sbjct: 563 SLMAMPGDAF 572


>gi|220928421|ref|YP_002505330.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
 gi|219998749|gb|ACL75350.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
          Length = 378

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 136/372 (36%), Gaps = 32/372 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+ E  PA   L+++   +G   S+  + +                +      A
Sbjct: 26  PMAQQNDREEQMPA--ELIKKIGENGHLGSVIAKEYGGQELDMISIGLLNEEFGRGCSSA 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L++     A  +    T      W P+             M K  +    GLTE   G
Sbjct: 84  RSLLTVHGMVALAIDRWGTQEQRNYWLPR-------------MSKGHIIGAFGLTEPNVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  +I +      D        KW     ++D F++ A+ E +   FLV R       +
Sbjct: 131 SDAKSIETTAVLNGDCYVLNGKKKWITMGQVADVFLIFARCEDKPTAFLVNR-----DTS 185

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G   + +K  +G R++   EL   +        +    G       L  LD    +++  
Sbjct: 186 GFSTKPIKGLMGARASMVAELIMEDCHIPKENIVGR-VGTGLSHVGLNSLDYGRYTIAWG 244

Query: 329 RVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V L EA       Y+R+R   G  L    ++++ + +++++I AA  L        D  
Sbjct: 245 CVGLGEACLEESVRYSRKRKQFGQPLRQNQLIQKMVTEMSVNIKAARLLCLNAGYLKDIG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              +       +     KY+  KM   V ++A++  G  G   E  + R+YR+S  N I+
Sbjct: 305 DPDT------IMETWNAKYFAAKMVVKVASDAVQIHGAKGCCNEYPVERYYRDSKINEII 358

Query: 444 LGSGNAMVLDVL 455
            G+     L + 
Sbjct: 359 EGTTQMHELLIA 370


>gi|331698310|ref|YP_004334549.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952999|gb|AEA26696.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 385

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 128/353 (36%), Gaps = 28/353 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPRV 170
             GL+       +  +    A ++  A            L  + +  +  ++    T   
Sbjct: 44  AMGLYGFTIPEQYGGLGLAVAEEVELAMELGWTTPALRSLFGTNNGIAGHVLIEGGTEEQ 103

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K W P++ S E             V    GLTE   G+D + +++  ++  D       
Sbjct: 104 KKSWLPRLASGE-------------VTASFGLTEAEAGSDPSTLSTVARRDGDDWVINGS 150

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            ++  ++P++D  ++ A+      G   +   L      GL      +K+G     T ++
Sbjct: 151 KRYITNAPVADVIMVFARTNPDAPGNRGISTFLVPAGTPGLSTGPKDHKMGQFGAWTSDV 210

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
              +        +    G     +I         +  A + V      + E + YAR R 
Sbjct: 211 HLDDVRVPAEAVVGGEAGIDNGFRIAAKCLAHGRVHIAAVCVGMAARLVHETVEYARARQ 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +++  +AD   D+ A  AL  + A +FD+   +    A A       KY+
Sbjct: 271 AGGKPIAAFQLVQGMVADSVTDLHAGRALVRQAARAFDDGSDKVAGPAAA-------KYF 323

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           C +M   V   A++  GG+GY+   ++ R YR++    I  G+     + +  
Sbjct: 324 CSEMVGRVADRAVQVHGGAGYMRGVAVERFYRDARLFRIYEGTSQIQQVIIAR 376


>gi|163856212|ref|YP_001630510.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259940|emb|CAP42241.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 608

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 90/458 (19%), Positives = 165/458 (36%), Gaps = 60/458 (13%)

Query: 64  YVLSCTAQELARMANYNTPQL-HAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E AR        L         RWD  +V   P +          G      
Sbjct: 35  DLVDAILDENARFVEQAIAPLNVPGDTQPPRWDDGQVTTTPGFKQGFAEYAAAGWQGLQH 94

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKI 178
              +      +   + AA    +        + P +T   + AL  + +    + + P +
Sbjct: 95  PAQWGGQGLPK--LVAAAPSENIQAASLAFSLCPMLTDGVIEALLTVGSDAQRQAYVPNL 152

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + ++  T             + LTE + G+D+A + S+    +DG Y LSG K F++  
Sbjct: 153 IAGKWTGT-------------MNLTEPQAGSDLAQVASRAVPQADGTYRLSGQKIFITYG 199

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNR 282
             D       ++LA+  G       +  F+VP+ L +     G+ N +    L++K+G  
Sbjct: 200 EHDLAENIIHLVLARTPGAPAGVKGISLFIVPKFLVNDDGSLGARNDVWCASLEHKLGIH 259

Query: 283 SNATVELEF--------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            + T  L +            G+L+G+ N     +  M            ++    +   
Sbjct: 260 GSPTAVLLYGSGKGDVGEGAVGYLVGEQNRGLEYMFIMMNAARFGVGQQGIALSERAYQH 319

Query: 335 AIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381
           A+ YA+ R              +   P ++R +  +     AA A+SF  A + D     
Sbjct: 320 ALAYAQERVQGRAVEGSAGPVTISRHPDVQRMLLTMRGLTEAARAVSFVAAAAHDKGVHH 379

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +A+ R+   A+   + PI K +  + A  V +  ++  GG GYIEE   A++YR++   
Sbjct: 380 PDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQVHGGMGYIEETGAAQYYRDARIL 439

Query: 441 SILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
            I  G+       L     L  G        + +   L
Sbjct: 440 PIYEGTTAIQANDLVSRKTLRDGGATAYACIAAMRDTL 477


>gi|150025259|ref|YP_001296085.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771800|emb|CAL43274.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 389

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 139/353 (39%), Gaps = 17/353 (4%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           I   +     D  +  +   +A+  +     Y +  LE    +  S  +A   A+     
Sbjct: 38  IERFIWKKFGDMGYFGLKCPEAYGGLNLDLFYTVIFLEELQKIKSSGFAA---AMWAHAY 94

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +         S         P         L +TE  GG+D+A + +   K  +  + ++
Sbjct: 95  LAMTHLNAEGSERIKQEYLVPSILGEKIGALCVTEPFGGSDVAGMRTTAVKQGN-KFIIN 153

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++ + +D +++ A+    +G   +   L D +  G+   +L +K+G R++ T E
Sbjct: 154 GSKTFITNGIYADYYVVAAKTSPELGNKGISIFLVDTNLKGITATKL-DKLGWRASDTAE 212

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + F N       L+G+       +        L  AI + +    ++   I+Y  +R   
Sbjct: 213 IAFDNVEIPEENLMGEQGKGFPYIMQHFAFERLIMAINAHARAEYAIEYTINYMSQREAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     ++  I + A +I      ++      D+ +   +EA  A       K    
Sbjct: 273 GTTINKFQALRHTIVEHATEIEHCKIFNYAATARLDQGEYVVKEATMA-------KLKST 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K+A   I + ++ +GG GY+EE  +AR  R+S    I  G+   +   +  ++
Sbjct: 326 KVADLAIYDCLQMLGGYGYMEEYPLARLLRDSRLGPIGGGTSEILKEILSKMI 378


>gi|332021483|gb|EGI61848.1| Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Acromyrmex echinatior]
          Length = 636

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 158/416 (37%), Gaps = 60/416 (14%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + P++                       LTE   G+D  +I S+  K 
Sbjct: 172 ILLYGTPEQKAKYLPQV--------------SNGKLAAFCLTEPTSGSDANSIRSRAIKS 217

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQR 274
           +DG  Y L+G K ++S+  +++   + AQ    + + G     +   + +    G+    
Sbjct: 218 ADGSHYILNGSKIWISNGGIAEIMTVFAQTPITDPKTGETKDRITAFVVEKGFGGITNGP 277

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G + + T  L F +         NV     E  K+ +  L++    ++      M
Sbjct: 278 PEKKMGIKCSNTAALFFEDVKIPA---ENVLGKEGEGFKVAMNILNNGRFGMAACLSGTM 334

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R  + +A+++A +R   G  L +   ++  +  +++      +L++ +  + D   +   
Sbjct: 335 RYCINKAVNHATQRLQFGRTLDNYGTIQEKLGRMSILHYVTQSLAYMIPGNMDCGSQDYH 394

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +    A  V  EA++ +GG G+++E  + R  R+     I  G+ 
Sbjct: 395 LEAA-------ISKCFGSDSAWWVCNEAIQILGGMGFMQETGLERVMRDLRIFPIFEGTN 447

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF---- 503
           + + L V      G          L++   +    +  I+ ++        GL       
Sbjct: 448 DILRLFVA---LTGIQYAGSHLKELQKAFKNPSANLGLIVEEATKRATRAIGLKSLPTFG 504

Query: 504 ------LTEKIALASSA---------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                 L E  AL S +         ++L + G   + + F+ NR       T+ M
Sbjct: 505 NLVHPKLAESAALCSRSVENFGQVIESSLIKYGRGIVDEQFILNRIAQAAFDTYTM 560


>gi|331215135|ref|XP_003320248.1| medium-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
 gi|309299238|gb|EFP75829.1| medium-chain specific acyl-CoA dehydrogenase [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 359

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 126/366 (34%), Gaps = 34/366 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L+ +   GL  +     +  +          +                S  + + + +  
Sbjct: 8   LKEAWKAGLLNTHVPEEYGGIGIGLLESALISEEIAYGCTGIQTAFEASGLAQAPLIVAG 67

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + +   +              +  +     +TE   G+D+A I +Q  K  +   
Sbjct: 68  SDELKRKYLSMLI-------------EEPLVAAYCVTEPGAGSDVAGIKTQAVKTGNDFV 114

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +   +  + +LA+ +        +   + D +  G+   + +  +G R + 
Sbjct: 115 LNGSKMWITNGGKASWYFVLAKTDPEAPVHKSMSGFIVDANSPGVLVGKKEINMGQRCSD 174

Query: 286 TVELE----------FSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           T ++           F +       L+G +            +     A  +V   + +L
Sbjct: 175 TRQITYTNEQNHTNQFEDVVVPSSNLVGAMGEGFKVAMAAFDITRPLVASGAVGLAQRAL 234

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +EA+ YA+ R   G  +I+   +   +A++ + + AA A+ ++     D     +     
Sbjct: 235 SEAVKYAQTRKTMGKPIIEHQSVSHMLAEMTIGVEAARAMVWKSTFIKDTGHRNT----- 289

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A I K    ++A      A++  GG+G+  E  + + YR+S   ++  G+     L
Sbjct: 290 --YYASIAKCLSSEVAVRNAGMAVQIFGGAGFNTEYPVEKLYRDSKIFTLYEGTSQIQRL 347

Query: 453 DVLNLL 458
            +   L
Sbjct: 348 IISKFL 353


>gi|313126784|ref|YP_004037054.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312293149|gb|ADQ67609.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 380

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 134/382 (35%), Gaps = 33/382 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  +     P    +        +        +  +   Q  + +    L  +
Sbjct: 22  EEISPIAQEIEDEHRFPE--EIFEELADLDMLGVPISEEYGGLGGDQLMYALVTEELGRV 79

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        +    ++  + L  T    + W   +   EY               G  LT
Sbjct: 80  SGGIGLSYAAHISLASKPIELFGTEEQKERWLRPLAEGEY-------------LGGWALT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D + + +  +K  D        ++  ++ ++ + ++ A  +   G   +   + 
Sbjct: 127 EPSSGSDASDMDTTAEKDGDEWVIDGSKQFITNANVAGSVLVKAVTDPGEGYDGISTFIV 186

Query: 264 D-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSA 321
           D    +G     + +K+G   + T EL F          L     G  + MK    LD  
Sbjct: 187 DPEEDDGFEVTTVWDKMGLNCSPTCELAFDEVRIPEDRLLGEEGAGWKQTMK---TLDGG 243

Query: 322 IMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +S++ +   LA+  +     YA  R   G  +     ++  + D+      A  L+ + 
Sbjct: 244 RISIAALSTGLAQGAYEAAKTYAGDREQFGKPISKFDAIRDKLVDMHRKTERARLLTHKA 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A  +D  +S S E+A A++ A        + A  V  +A++ +GG GY E+ +  R YR+
Sbjct: 304 ATRYDAGESVSRESALAKLDA-------SEAAREVAEDAVQVLGGYGYTEDFAPQRFYRD 356

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+     L +   L
Sbjct: 357 AKLMEIGEGTSEIQHLVIGREL 378


>gi|111222047|ref|YP_712841.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111149579|emb|CAJ61272.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 380

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 143/378 (37%), Gaps = 28/378 (7%)

Query: 100 HPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH------- 150
           H A+  + R         H + W+++     R+      A  L      EA         
Sbjct: 10  HRAFREIARAFYDKECAPHSAEWEKA-GVTAREPWLVAGAMGLIGWEAPEAFGGQGIKDF 68

Query: 151 ----LMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
               +M+  + +     + +     +   +   + + E             +   + ++E
Sbjct: 69  RYNAIMTEEMYATGTVGIGIGLQNDIMASYLVDMTTDEQKERWLPGFVNGELITAIAMSE 128

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A + +  ++  D  Y ++G K F+S+ + SD  + + + +   G   +  L  
Sbjct: 129 PGAGSDLAGVKTSARRAGDH-YVVNGSKTFISNGLLSDLVVTVVKTDPAAGRKGISLLAI 187

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G    R  +KIG +S  T EL F+        L+G+ N     +        L  
Sbjct: 188 ERGMEGFERGRNLDKIGQKSADTAELVFNEVKVPVENLIGEENRGFYHLMSNLPAERLGI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI +VS  R ++     YA  R   G  +    V + AIA++++ +        R   + 
Sbjct: 248 AINAVSQARRAVELTKQYASDRSAFGQPIGTFQVNRHAIAEMSVKVDVMQTYVDRCIEAV 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +  + EAA A       KYW  +    ++   ++  GG GY+ E  IAR +R+S   
Sbjct: 308 NAGELTAAEAAGA-------KYWATETQWEILDRCLQLHGGYGYMNEYEIARLWRDSRVQ 360

Query: 441 SILLGSGNAMVLDVLNLL 458
            +  G+   M   +   L
Sbjct: 361 RLYGGTNEIMKDLIGRSL 378


>gi|113868125|ref|YP_726614.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113526901|emb|CAJ93246.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 386

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 81/360 (22%), Positives = 131/360 (36%), Gaps = 27/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
             L R +   GL C     ++        H          A         + S   A  +
Sbjct: 49  RDLWRDAGAHGLLCPGLPEAYGGAGGDFLHSAIVVEEIARALASGVTGFTTHSENVAPYL 108

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    +++ P++ S               V   + +TE   G+D+ AI +   K+ 
Sbjct: 109 LEFGTEAQKREFLPRMASG-------------DVVGSIAMTEPGAGSDLKAIRTSAVKV- 154

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG Y L+G K F+++   +D  ++ A+ E   G   +     D +  G    RL +KIG 
Sbjct: 155 DGGYRLNGQKTFITNGYHADRVLVFAKTEPAAGARGISLFWVDTTSPGFSRGRLLDKIGQ 214

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           ++  T EL F +       L+G+ N   G      +   L  A+     + V+L   I +
Sbjct: 215 KAQDTAELFFEDVLVPDDMLVGERNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIAH 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R      LID   ++  +A+I     A  A        +       + AA A+  A 
Sbjct: 275 VKERRAFDKALIDNQFIRFRLAEIKTHACATRAFVDSCLEQYLAGTLTPDGAAMAKYWAG 334

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                    A   I + M+  GG GY+ E  IAR Y +   N I  GS   M   +   L
Sbjct: 335 E--------ATRAIDDLMQFFGGYGYMREYPIARAYTDVRPNRIYGGSAEIMREVIARAL 386


>gi|111020016|ref|YP_702988.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819546|gb|ABG94830.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 396

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 136/380 (35%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +  A++ ++   GL        +  +                  +    +++
Sbjct: 34  QELEHSDTYPTAIVEQTKEMGLFGLTIPEEYGGIGESLLTYALCVEEIARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+A   TP     + P++ + E             +     ++E   G+D+AA
Sbjct: 94  THFIVAHMIANHGTPEQKAHYLPRMATGE-------------LRGAFSMSEPELGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE--GRVGCFLVPRLLEDGSP--- 267
           I ++  + +DG Y + G K +L++  S   + +L + E         +   L +      
Sbjct: 141 IRTKAARAADGNYVIDGQKMWLTNGGSSTLVAVLVRTEEGAAKPHDNLTAFLIEKPAGFG 200

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL      +K+G +   T E+ FS         L GD       + D   +  ++ 
Sbjct: 201 EVLPGLTIPGKIDKMGYKGIDTTEMVFSGYQAGADTILGGDPGRGFRQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +    + +    + YA+ R   G  + +   +   IA++A  + AA  +    A   
Sbjct: 261 AARACGIAQRAFELGVKYAKTRETFGSPIAEHQAIAFRIAEMATKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +     A  A+ +A        +    V  ++    GG GY +E  I R  RE+P  
Sbjct: 321 DSGERNDVAAGMAKYLA-------SEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAPFL 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+ +     +   L +
Sbjct: 374 LIGEGTSDIQKQIISRGLLR 393


>gi|220917382|ref|YP_002492686.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955236|gb|ACL65620.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 389

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 143/381 (37%), Gaps = 26/381 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++   PA   L+R     GL       ++            A      A    
Sbjct: 26  PAAAENDRLRRFPA--DLIRGLGELGLLAVNVPAAYGGSEAGAVAYALAIMEIAAADCAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+ +     ++A   T    +   P++ + E             +A    L+E + G
Sbjct: 84  AVTMAVTNMVGELIARFGTEAQKQRHLPRLAAAEV------------LAGAFALSEPQAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGS 266
           +D  A+ ++  +  DG       +W  S  ++   ++ A+       G   V   L +  
Sbjct: 132 SDAGAMRTRAVRRGDGWVIDGAKQWITSGDVAGVLVVWARTGPAEAGGGGGVTAFLVEQG 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL   R ++K+G R+++TV L F          LG++               +  A  
Sbjct: 192 TPGLLVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDGGRVGIASQ 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +   +R +L  ++ YAR R   G  + +   +   +AD+A++   A  L+ R A   +  
Sbjct: 252 ATGTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTARLLALRAAALKEAG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EA+ A       K W  + A   +  A++  GG GY E+  +AR++R++   +I 
Sbjct: 312 RPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVARYFRDARVQTIY 364

Query: 444 LGSGNAMVLDVLNLLEKGTNL 464
            G+     L +   L K    
Sbjct: 365 EGTSEIQRLVIARELLKDGGA 385


>gi|72161783|ref|YP_289440.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915515|gb|AAZ55417.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 409

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 134/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +L+ +   GL+   +  +        A  +    LY       
Sbjct: 34  PAAAEWDEREETP--WPILQEAAKIGLYSLDFFANQMFDPSGIAIPVVYEELY-WGDPGI 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++ +  +A  V+   T     +W P++F    D                 ++E   G
Sbjct: 91  ALALTGTTLAAVAVSANGTQEQILEWTPQMFGTPDDI----------KLGAFCVSEPDAG 140

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++       D         W  +  ++D  +++A V+  +G       +    
Sbjct: 141 SDVGAIRTRAVYDEAKDEWVLNGTKTWITNGGIADVHVVVASVDPELGTRGQASFVIPPG 200

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   +  +K G R++ T E+   +                           +     
Sbjct: 201 TKGLSQGQKFSKHGIRASHTAEVILDDVRIPGRCLLGGKEKLDQRLARAREGRRSKGQAA 260

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A  Y R+R   G  + D   +   +AD+A  I AA
Sbjct: 261 MKTFEASRPAVGAMAVGCARAAYEYARDYVRQREQFGRPIGDNQAVAFTLADMATRIDAA 320

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R +      K       +A     ++K +  + A  V   A+  +GG+GY  +  
Sbjct: 321 RLLVWRASWMARYGK------EFANAEGSMSKLYASETATWVTQNAIRLLGGNGYTRDYP 374

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   +
Sbjct: 375 VERWHRDATIFTIFEGASEIQRLIIGRAI 403


>gi|324997622|ref|ZP_08118734.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 386

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 125/373 (33%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +                     +     M     
Sbjct: 35  EYPEKWIEQMK---ELGIYGLAVPEPWGEAPVSMPCYALVTAELARGWMSLAGAMGGHTV 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++    T      + P++ + E   T             + LTE  GG+D+  + + 
Sbjct: 92  VAKLLVEFGTQEQKDRYLPRMATGELRAT-------------MALTEPGGGSDLQNMATH 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRL 275
                DG        W  ++  S    +L + +         +  LL +  P GL   + 
Sbjct: 139 AASDGDGYVINGSKTWISNARRSGLIALLCKTDPAAEPKHRGISVLLVEHGP-GLTVSKD 197

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F          L      G  + MK L    +  A  ++     +
Sbjct: 198 LPKLGYKGVESCELVFEGMRVPADAVLGGTPGRGFGQMMKGLETGRIQVASRALGVADAA 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YA+ R   G  +     +   +AD+A  I AA  L    A  +D  +    EA 
Sbjct: 258 LEDSLRYAQDRESFGKPIWQHQSVGNHLADMATKITAARQLILYAAQKYDRGERCDMEAG 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  V   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 318 MA-------KLFTSEIAMEVALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQR 370

Query: 452 LDVLNLLEKGTNL 464
             +   L K   L
Sbjct: 371 NVIAAQLVKRGGL 383


>gi|296170298|ref|ZP_06851889.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895021|gb|EFG74740.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 397

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 134/383 (34%), Gaps = 35/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ + +P    ++ R    GL   +  + +  +                  +  
Sbjct: 31  PSAAELERGDIYP--QDIVDRMRDMGLFGLMIPQEYGGLGESLLTYALCVEELARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T    + + P++ + E                   ++E   G
Sbjct: 89  SGVLNTHFIVAYMLRQHGTEAQKQRFLPRMATGE-------------TRGSFSMSEPELG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE--GRVGCFLVPRLLEDG 265
           +D+AAI ++  +  DG Y ++G K +L++  S   I +L + E         +   L + 
Sbjct: 136 SDVAAIRTRAVRHPDGDYTINGQKMWLTNGGSSTLIAVLVRTEEGADKPHRNLTAFLVEK 195

Query: 266 SP------NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKIL 315
                    GL      +K+G +   T EL F          L G        + D   +
Sbjct: 196 PTGFGEVVPGLVIPGKIDKLGYKGIDTTELVFDGYRASADDVLGGAPGQGFVQMMDGIEV 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ +  +      +   A+ YA++RH  G  + +   +   +A++A  I AA  +   
Sbjct: 256 GRVNVSARACGVGIRAFELAVRYAQQRHTFGKPIAEHQAIAFQLAEMATKIEAAHLMMVN 315

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +     A  A+ +A        +    V  ++    GG GY +E  I R  R
Sbjct: 316 AARLKDSGERNDVAAGMAKYLA-------SEYCTEVTQQSFRIHGGYGYSKEYEIERLMR 368

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++P   I  G+       +   L
Sbjct: 369 DAPFLLIGEGTSEIQKSIISKRL 391


>gi|114762862|ref|ZP_01442294.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114544472|gb|EAU47479.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 379

 Score =  242 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 134/374 (35%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+     P    L       GL               +           MA    
Sbjct: 26  PNAMAWEAEGTIP--KELWTEIGQLGLGGIYVSEENGGSGLSRLDATLVFEALSMACPAV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    +  +   + PK  + E               +   LTE   G
Sbjct: 84  AAFLSIHNMCAKMIDRYGSDDLRARYLPKALTME-------------TVLSYCLTEPGSG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ ++ +   +G Y L+G K F+S    SDA+I++A+  G  G   +  L+ D   
Sbjct: 131 SDAAALATRAEASGNG-YSLTGTKAFISGGGYSDAYIVMART-GEAGPRGISALVVDDGT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL +  L+ K+G ++  T +++        G LLG+                L+ +  S
Sbjct: 189 EGLSFGGLEAKMGWKAQPTRQVQMDGCPVPAGNLLGEEGKGFRYAMAGLDGGRLNISACS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L   + Y   R   G  +     ++  +AD+ +++ AA     + A   D   
Sbjct: 249 LGAAQAALDATLAYMAERRAFGQSIDQFQALQFRLADMEIELQAARTFLRQAAWKLDTGA 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A     + K +  +    +  + ++  GG GY+ +  I +  R+   + IL 
Sbjct: 309 PD------ATKFCAMAKKFVTEAGSKIADQCLQLHGGYGYLADYGIEKIVRDLRVHQILE 362

Query: 445 GSGNAMVLDVLNLL 458
           G+   M + V   L
Sbjct: 363 GTNEIMRMIVARSL 376


>gi|296270123|ref|YP_003652755.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092910|gb|ADG88862.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 383

 Score =  242 bits (619), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 147/377 (38%), Gaps = 33/377 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GE +++ EF    + ++ +    GL        +  +         A             
Sbjct: 27  GEYYERCEFP---YEIVAKMGAMGLFGLPIPEEYGGMGGDYFALCLALEELARVDSSVAI 83

Query: 151 LMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +  +V+  +M  L   TP   + W P +   E             +    GLTE  GG+
Sbjct: 84  TLEAAVSLGAMPILRFGTPEQKRRWLPGMARGE-------------ILGAFGLTEPGGGS 130

Query: 210 DI-AAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLED 264
           D+  A+ +    + +G + ++G K F+++  +D    I +A V GR   G   +  +L  
Sbjct: 131 DVPGAMRTTAV-LENGEWVINGTKAFITNSGTDITGVIAVAAVTGRREDGRPEISTILVP 189

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSA 321
               GL   +  +K+G  ++ T EL F++        L V   G  + ++ L    +  A
Sbjct: 190 AGTPGLTVSKKYSKVGWSASDTRELSFTDCRVPEENLLGVRGRGYAQFLQTLDEGRIAIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E+I YA+ R   G  L     ++  IAD+   +  A    +  A    
Sbjct: 250 ALSVGLAQGCVDESIKYAKERTAFGRELARHQAIQFKIADMEARVHTARLAYYHAAERML 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   +EAA A+++A          A     +A +  GG G++ E  + R YR++    
Sbjct: 310 AGEPFKKEAAIAKLVASNA-------AMDNARDATQIFGGYGFMNEYPVGRFYRDAKILE 362

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 363 IGEGTSEIQRMLIAREL 379


>gi|194751744|ref|XP_001958185.1| GF23652 [Drosophila ananassae]
 gi|190625467|gb|EDV40991.1| GF23652 [Drosophila ananassae]
          Length = 527

 Score =  242 bits (619), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 83/413 (20%), Positives = 157/413 (38%), Gaps = 52/413 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  TP     + PK+                 V     LTE   G+D  +I  +  K 
Sbjct: 62  ILLYGTPEQKAKYLPKV-------------AAEQVYAAFALTEPSSGSDAGSIRCRAVKT 108

Query: 222 SD-GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQR 274
            D   Y L+G K ++S+  +++   + AQ    + + G     V   + + S  G+    
Sbjct: 109 PDNKYYVLNGSKIWISNGGIAEILTVFAQTEVVDPKTGQKKDKVTAFIVERSFGGVTSGP 168

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328
            + K+G +++ T E+ F +    +    NV     +  K+ +  L++    +       M
Sbjct: 169 PEKKMGIKASNTTEVYFEDVKIPV---ENVLGKEGDGFKVAMNILNNGRFGMGATLSGTM 225

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           +  +  A  +A  R   G  L +   ++  IA + +   A  +++F +A + D   +   
Sbjct: 226 KKCIELATAHATNRVQFGQHLKNYKGIQDKIAQMNILQYATESMAFAIAQNMDAGSQDYH 285

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA       I+K +  + A  V  EA++ +GG GY+ E  + R  R+     I  G+ 
Sbjct: 286 LEAA-------ISKIYASECAWYVCDEAIQILGGMGYMVETGLERVLRDLRIFRIFEGTN 338

Query: 448 NAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISL---------C 494
           + + L V    +   G++L   +Q F     +LG   K+       ++ L          
Sbjct: 339 DILRLFVALTGIQYAGSHLKELQQAFKNPAANLGLIFKEASKRAASTVGLGGTDLSVHVT 398

Query: 495 KEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTHCML 545
            E    ++     I L        L R   + I +  L  R  +     + M+
Sbjct: 399 DELLPSSKKTAHCIDLFGQTVEELLIRYKKDIIHEQILLTRLANAAIDIYSMV 451


>gi|296446824|ref|ZP_06888762.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296255699|gb|EFH02788.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 590

 Score =  242 bits (619), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 92/502 (18%), Positives = 171/502 (34%), Gaps = 52/502 (10%)

Query: 40  DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD---- 95
           D LL A+             L  +         LA  A +    L      G+R      
Sbjct: 8   DDLLFAMRRAAGESAFAPGGLYDDCDAETARATLAEAAKFAEGVLLPLDRIGDREGLRFA 67

Query: 96  --KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
             +V   P W    R+ +  G +      +   +            ++  A +       
Sbjct: 68  GGEVTTAPGWRDAYRQWVEGGWNALAAGPAHGGMGLPLLLAAACTEIWNAANISFALCPL 127

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   +    +  +   + PK+ S E+                + LTE + G+D+A 
Sbjct: 128 LGQGAIEAMEAHASEALKAVYLPKMISGEW-------------TATMNLTEPQAGSDLAL 174

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL 262
           + ++ +++ DG Y L+G K F++    D        +LA++         +  FL P+ L
Sbjct: 175 LRTRAERVGDGSYRLTGQKIFITYGEHDLSENILHFVLARLPDAPPGTRGISLFLAPKFL 234

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
            D     G  N L    ++ K+G  +  T  + + +      FL+G+ N     +  M  
Sbjct: 235 PDADGRPGERNDLRCAGVERKLGIHAAPTCTMAYGDNGGARAFLVGEENAGLACMFTMMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIA 367
              L   +  V+    +   A+ YAR R             ++  P + R +  +    A
Sbjct: 295 NARLSVGLQGVALAERATQAALAYARERLQGRAPGGPDPSPIVAHPDVARMLLTMKAQTA 354

Query: 368 AATALSFRLANSFDEAKSRS-----EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AA A+SF  A S D A+ +S     E    A ++ P+ K +   +     +  ++  GG 
Sbjct: 355 AARAISFLTAASLDRARRQSGEAAREAEERAGLLTPLAKAYSTDIGVETASLGVQVHGGM 414

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+IEE   A+  R++    I  G+       L    L         +    +  DL +  
Sbjct: 415 GFIEETGAAQLLRDARITPIYEGTNGIQAIDLVTRKLRLSDGAAIWREIDDMRADLDALA 474

Query: 481 KKVITILRDSISLCKEDKGLAR 502
              +  +          +   R
Sbjct: 475 GGGVVFVHIGERAAAAVEAFER 496


>gi|329937763|ref|ZP_08287282.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus
           M045]
 gi|329303162|gb|EGG47050.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus
           M045]
          Length = 379

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 121/370 (32%), Gaps = 26/370 (7%)

Query: 93  RWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R ++ E   ++   L       GL   ++   +    +     ++               
Sbjct: 30  RVEEHERAESYPEGLFATLGQAGLLGLVYPEEYGGGGQPYEVYLQVLEELAARWASVAVA 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S    +   +    T    + W P + + E                G  L+E   G+D 
Sbjct: 90  TSVHTLACHPLHAYGTEEQKERWLPAMLAGE-------------RIGGYSLSEPGAGSDA 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+T + +   +G        W      +D + + A+     G   V   L  G+  GL 
Sbjct: 137 AALTCKAEPTPEGYRITGTKAWITHGGKADFYALFARTAP--GPHGVSCFLAPGAVEGLS 194

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +   + K+G  +  T    +         L+G                 L  A  +    
Sbjct: 195 FGLPERKMGLHAVPTAAAHWDGALLEKDRLIGAEGQGLAIAFSALDCGRLGIAACATGLA 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L  A+ YA  R   G  L+D   +   +AD+   + +A A     A   D   + S 
Sbjct: 255 QAALDVAVDYANERTTFGRRLVDHQGLGFLLADMTAAVDSARATYLDAARRRDRGHAFSR 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +       A + K      A  V  +A++ +GG GY  +  + R+ RE+    I  G+  
Sbjct: 315 Q-------ASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFPVERYMREAKITQIFEGTNQ 367

Query: 449 AMVLDVLNLL 458
              L +   L
Sbjct: 368 IQRLVISRGL 377


>gi|295663895|ref|XP_002792500.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226279170|gb|EEH34736.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 628

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 123/544 (22%), Positives = 210/544 (38%), Gaps = 81/544 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q P  I    Y  D+ L  +I+       PS++ ++L      VLS +  
Sbjct: 8   EPSSATKGFFQTPPTIPP-QYVEDAALRRIISLHLPSPTPSIIDEDLSRFSRLVLSRSHL 66

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G   + D +     W  L    I +G     +D +      
Sbjct: 67  AHVADAEKNQPYLRPLTTFGVENKQDPLVTSEGWRKLQDIGIEEGFVALGYDDAPGNPAS 126

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS--------- 180
              +++         Q    H+ + S       AL+T P    D A K+           
Sbjct: 127 HWNNRVY--------QSIKQHIWTSS------AALVTCPGAMTDGAAKLLGAHLNDKDGG 172

Query: 181 --REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI------ 225
             RE      +   + +   G  +TE++GG+D+    +  +K        SDG+      
Sbjct: 173 IFREARNRLISRDPRFAWTSGQWMTERKGGSDVRGTETVARKFSAEEQSASDGVDSLGNP 232

Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
              + L G KWF S+  ++  IMLA+   +G++  F  P R    G        NG+  Q
Sbjct: 233 LGPWQLDGFKWFSSATDANMTIMLAKTGPDGQISAFYAPLRRKVPGGTEGETELNGVRIQ 292

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +    + I +V G   +LA
Sbjct: 293 RLKNKLGTKTLPTAELELKGMRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALA 352

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--------- 384
            +  YAR R   G +L D P   RA+A   +   A   L+F +A+    ++         
Sbjct: 353 ISRAYARVRVSGGRLLTDIPAHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSRLTLA 412

Query: 385 --------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
                      + +A  R++ P+ K      A   +   ME +GG GY+E      ++AR
Sbjct: 413 TRASILPTDAQQASALLRLLTPMAKAQTALRAIHGVRACMESLGGVGYLENEDPLFNVAR 472

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R++   SI  G+ + M  D + +++  KG  +   +   +   L  + K       + 
Sbjct: 473 IFRDTCVVSIWEGTTDIMADDFVRVIKSRKGPEILMAVGQWVSSALAIANKHSFQKEGER 532

Query: 491 ISLC 494
           +   
Sbjct: 533 LQKA 536


>gi|126436590|ref|YP_001072281.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236390|gb|ABN99790.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 379

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 135/403 (33%), Gaps = 33/403 (8%)

Query: 63  EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHA-LLRRSIHDGLHCSIW 120
             + +  A+EL ++A +     L          D+ E    +   +       GL     
Sbjct: 5   RLLPTAEARELIQLAADVADKVLKP------VVDEHERSETYPDGVFAALGETGLLTLPH 58

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +    +     ++               +S  V S   +    T    + W P + S
Sbjct: 59  PEEWGGGGQPYEVYLQVLEELAARWAAVAVAVSVHVLSCHPLIAFGTTEQKQAWLPAMLS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                L+E + G+D AA+  +   ++DG        W     ++
Sbjct: 119 G-------------QTIGAYSLSEPQAGSDAAALACKATAVADGYRINGAKAWITHGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           D + + A+     G   +   L +   +GL + + + K+G  +  T    + +       
Sbjct: 166 DFYSLFART--GEGSGGISCFLVEKDTDGLSFGKPEEKMGLHAVPTTTAHYDDALVPTQR 223

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G                 L  A ++V   + +L EA+ YA++R   G  +ID   +  
Sbjct: 224 RIGTEGQGLQIAFSALDAGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + +A A     A   D     S         A + K      A  V  +A++
Sbjct: 284 LLADMAAAVDSARATYLDAARRRDAGLPYSR-------NASVAKLVATDAAMKVTTDAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY  +  + R+ RE+    I  G+     L +   L +
Sbjct: 337 VFGGYGYTRDYRVERYMREAKITQIFEGTNQIQRLVIGRSLGR 379


>gi|311695467|gb|ADP98340.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 600

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 83/494 (16%), Positives = 173/494 (35%), Gaps = 61/494 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE  P            G     +D     +   ++        +  A          +
Sbjct: 71  QVEMLPQVKEAFDAYAQAGFIAGRYDYELGGMQLPESVMAACNGFFTAANPGTAGYPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++ +    +    + P + S  +  T             + LTE   G+ +A I 
Sbjct: 131 TAAANLIRVFGNEQQKTTFLPNMLSGRFSGT-------------MALTEPHAGSSLADIR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           +      +G Y + G K ++S            ++LA+++G       +  F+VP+ L D
Sbjct: 178 TSASPTDEGHYLIKGAKIYISGGEQSITDNIVHMVLAKIKGAPAGVKGISLFIVPKFLVD 237

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                   NG+    L +K+G R   +  L F +     G+L+G+ +     +  M    
Sbjct: 238 DEGNPTERNGVSLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVGEPHQGLKYMFQMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +     +          ++ YA+ R                 +ID   ++R +      
Sbjct: 298 RVGVGFGAAVIGYRGYMHSLEYAKDRLQGRKASEKNPESPQVPIIDHADVRRMLLAQKAY 357

Query: 366 IAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                AL    A   D+  +      R E      ++ P+ K W  +  P     A++  
Sbjct: 358 SEGGLALCLYGARLMDDQHTHPDEQKRQEAGKLLDLLTPVIKAWPSEYGPKANDLAIQVY 417

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG+GY  E  + + +R++  N I  G+     +D+L   + +  ++  + L   ++ DL 
Sbjct: 418 GGAGYTREYPVEQCWRDNRLNPIHEGTNGIQAMDLLGRKIWQDQSHGLQLLMQEMQVDLQ 477

Query: 478 SSGKK-----VITILRDSISLCKEDKGLARFLTE---KIALASSAAALYRAGMNDIADVF 529
           ++         +++        K  + L + L E      LA+++  L+  G   +A ++
Sbjct: 478 AATTDRCQQWALSLSETLQQAVKVTQSLGKSLMEGDPDKTLANASCYLHLFGHIMVAWMW 537

Query: 530 LENRFLDNCHSTHC 543
           L  R  +       
Sbjct: 538 L--RQANAASHALG 549


>gi|229580336|ref|YP_002838736.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228011052|gb|ACP46814.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
          Length = 400

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRISVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A I +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPAAGSDVAGIQTIAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  A+ FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAASLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|84501856|ref|ZP_01000014.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389851|gb|EAQ02485.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 399

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 139/403 (34%), Gaps = 28/403 (6%)

Query: 66  LSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           ++   Q LA  A      + H      +  D +   PA  ++  +    G         F
Sbjct: 16  MTDEQQALADQAEKFFMSEFHHLNAEMDDTDDL---PA--SVFPKLGEMGYLGLNVPPEF 70

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSR 181
                             M++  A   ++         + +       +   + P +   
Sbjct: 71  GGAGLD--FTSACIITEQMSRASAAIGLTHVAHDNLCVNNIYRNANDDLRHKYLPGLCDG 128

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                        ++   LGLTE   G+D + ++ +   K  D         +  + P++
Sbjct: 129 -------------TLIGALGLTEPGAGSDALGSMRTTATKDGDDYILNGAKIYITNGPIA 175

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  ++ A+     G   +   + +    G    +  NK+G R + T EL F +       
Sbjct: 176 DLVLVYAKTAPEKGAKGISAFIVETDTPGFKVAQKLNKMGFRGSPTGELVFEDCRVPAGN 235

Query: 301 DLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +    G V      + L+ AI+   ++   + +L  +I YA+ R   G  +    +++ 
Sbjct: 236 MVGKLDGGVAVTMSGLDLERAIVCFNAMGIAQRALDISIDYAKTRQQFGKPIASFQMVQA 295

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+   I AA +LS R A   +  +           +     Y   +    V+ +A++
Sbjct: 296 MLADMYTQIEAARSLSLRTAAMCEGLEEGEGGRGEIHKLTAAAIYKAAEATSFVLDKAVQ 355

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GGSGY+ +  + R YR      +  G+     L +   L K
Sbjct: 356 IHGGSGYMRDTEVNRLYRTGRVLEVGAGTQEVRKLIISGELLK 398


>gi|226361475|ref|YP_002779253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239960|dbj|BAH50308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 135/361 (37%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             +   +  +G        ++          + + A  L   +   +      +   A  
Sbjct: 40  REIWLEAGRNGFLGLEVPEAYGGSEAGDYRFNAVLAEELSRASAAVSSSFGIHADVVAPY 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  +TT    + W PK  + E             +   +G+TE  GG+D+A++ +   K 
Sbjct: 100 LVQLTTEEQKQRWLPKFCTGE-------------LLTAIGMTEPSGGSDLASLKTTAVKD 146

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + ++G K F+++   +D  I+ A+         +     +    G    R  +K+G
Sbjct: 147 GDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLDKVG 205

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              + T EL F N       ++G+++     + +M     + +A+ +++     L E I 
Sbjct: 206 QHESDTAELFFENVRVPSANIIGEIDRGFIHMMEMLPQERVGAAVSNLAHAAPILEETIQ 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +      K  +AD+   +    A       +  + +  + +AA A+   
Sbjct: 266 YAKDRKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAKAKW-- 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W  ++   V+   ++  GG G++ E   AR + ++    I  GS   M   +   
Sbjct: 324 -----WTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIMKELIGRD 378

Query: 458 L 458
           L
Sbjct: 379 L 379


>gi|83745809|ref|ZP_00942866.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|83727499|gb|EAP74620.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
          Length = 915

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/438 (19%), Positives = 176/438 (40%), Gaps = 57/438 (13%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         +      +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 407 QGGWQGVQHPVEYGGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSEA 464

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++ S E+  T             + LTE + G+D+A + ++ + + DG + + 
Sbjct: 465 QKQRFVPRLISGEWTGT-------------MNLTEPQAGSDLALVRTRAEPVGDGTFKIF 511

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ L +     G+ N +   
Sbjct: 512 GTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVVPKFLVNDDGSLGARNDVHCV 571

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L+F +     G L+G+ N     +  M         +  +     
Sbjct: 572 SIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNAARYAVGMQGIGVSER 631

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A+ YAR R  S            +I  P +KR +  +      A AL++  A + D
Sbjct: 632 AYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRMLLTMRAMTEGARALAYVAAAACD 691

Query: 382 EAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                 ++AA  +  A      P+ K W  +M+  V +  ++  GG G+IEE   A++YR
Sbjct: 692 AGHHAGDDAARKQNEALYEFLVPVVKGWSTEMSIDVTSLGVQVHGGMGFIEETGAAQYYR 751

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDS 490
           ++    I  G+       L     +  G  +   + + +   E  L + G      +R  
Sbjct: 752 DARILPIYEGTTAIQANDLVGRKTVRDGGAVALGICAEIAKVEAQLAAKGGAHCDAMRAR 811

Query: 491 ISLCKED-KGLARFLTEK 507
           ++  +E    + RF+  +
Sbjct: 812 LAAGREAMDAVVRFVVAQ 829


>gi|269126739|ref|YP_003300109.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311697|gb|ACY98071.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 397

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 128/382 (33%), Gaps = 33/382 (8%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E   A+   ++      G+        +  +                  +    +++ 
Sbjct: 35  ELEHADAYPQRIVDGLKKLGVFGLTIPEQYGGLGESLLTYALVVEELSRGWMSVSGILNT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T        PK+ + E             V     ++E   G+D+AAI
Sbjct: 95  HFIVAYMIGRHGTEEQKARLLPKMATGE-------------VRGAFSMSEPDCGSDVAAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP----- 267
            ++ ++  D         W  +   ++   +L + +         +   L +  P     
Sbjct: 142 RTRARRDGDHYVIDGRKMWLTNGATANLIALLCRTDEGADSPHRNMTTFLVEKEPGFGEV 201

Query: 268 -NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
             GL       K+G +   T EL            L G        + D   +  ++ A 
Sbjct: 202 APGLTIPGKIEKMGYKGVDTTELLLDGYRVPAGSILGGVPGRGFYQMMDGVEVGRVNVAA 261

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +    R +   AI YA+RR   G  + D   ++  +A++A  + AA  +    A   D 
Sbjct: 262 RACGVARRAFELAIDYAQRRETFGKRIADHQAVRFRLAEMATKVEAAHQMMVMAARRKDS 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A+ +A        +    V+ +A    GG GY  E  I R YRE+P   I
Sbjct: 322 GRRNDLEAGMAKYLAG-------EYCKEVVEDAFRIHGGYGYSTEYEIERLYREAPMLLI 374

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+ +   + +   L +   L
Sbjct: 375 GEGTADIQKMIIGRRLLEEYRL 396


>gi|254393025|ref|ZP_05008188.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706675|gb|EDY52487.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 386

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/408 (20%), Positives = 154/408 (37%), Gaps = 39/408 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +EL R        + A    G+ +++ EF     A + R    GL    +  
Sbjct: 2   DHRLTPEHEELRRTVEQFAHDVVA-PAIGDLYERHEFPYGIVAEMGR---MGLFGLPFPE 57

Query: 123 SFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  I    L  +    A  L +     A  +    T    + W PK+ S 
Sbjct: 58  EYGGMGGDFLALGIALEELARVDSSVAITLEAGVSLGAMPLYRFGTEEQKRRWLPKLCSG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMS 240
           E                  GLTE  GG+D     +   +    G + ++G K F+++  +
Sbjct: 118 EM-------------LGAFGLTEPEGGSDAGGTRTTAVRDEAAGEWVINGSKCFITNAGT 164

Query: 241 D--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D    + +  V GR   G  L+  ++      G       +K+G  ++ T EL F     
Sbjct: 165 DITGLVTVTAVTGRTPEGKPLISSIIIPSGTPGFTVAPAYSKVGWNASDTRELAFDGVRV 224

Query: 297 FLLGDLNV-STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350
            L   +     G  + ++I   LD   +++S +   LA     E++ YAR+RH  G  + 
Sbjct: 225 PLANLVGEEGRGYAQFLRI---LDEGRIAISALATGLAQGCVDESVAYARQRHAFGRPIG 281

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  IAD+ +    A       A+     +   ++AA A       K +   +A  
Sbjct: 282 ANQSIQFKIADMEMRAHMARVGWRDAASRLVLGEPFKKQAALA-------KLYSSTVAVD 334

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +A +  GG G++ E  +AR +R+S    I  G+     + +   L
Sbjct: 335 NARDATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIAREL 382


>gi|71985184|ref|NP_001022062.1| Acyl CoA DeHydrogenase family member (acdh-12) [Caenorhabditis
           elegans]
 gi|861335|gb|AAA68357.1| Acyl coa dehydrogenase protein 12, isoform a, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 613

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/472 (16%), Positives = 167/472 (35%), Gaps = 57/472 (12%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      A+L +    G    +     E      +   R A +     L  G +M    +
Sbjct: 93  ETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQS 152

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                + L  T    + + P + +                     LTE   G+D +++ +
Sbjct: 153 IGYKGILLEGTDAQKQKYLPDLATG-------------RKFAAFALTEPTTGSDASSVRT 199

Query: 217 QGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNG 269
           + +  +DG       G  W  +   +D F + AQ      +G     +    + + +  G
Sbjct: 200 RAELSADGKHYVLNGGKIWISNGGFADVFTVFAQTPVKQADGSTKDKM-SAFIVERAFGG 258

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV--- 325
           +     + K+G + + T E+ F N     +   N+     E  K+ +  L++    +   
Sbjct: 259 VTSGPQEKKMGIKGSNTTEVHFDN---LKIPVENLLGKEGEGFKVAMNILNNGRFGIPAA 315

Query: 326 --SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
               M+  + + + +   R   G  L +   ++  + ++   + A  ++ + L+++ D  
Sbjct: 316 CTGAMKHCIQKTVDHITTRVQFGKKLQEFGNIQEKLVEMISKLYATESIVYMLSSNMDRG 375

Query: 384 -KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K    EAA  +++A        + A  V  +A++  GG G++ E  + R  R+     I
Sbjct: 376 IKEYQLEAAIGKVLA-------SENAWLVCDDAIQVHGGMGFMRETGLERVLRDLRIFRI 428

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQL--------FSTLEQDLGSSGKKVITILRDSIS 492
             G+ + + L +        G +L EQ          +      G++G     ++  S+ 
Sbjct: 429 FEGANDVLRLFIALTGAQHAGKHLAEQASGVGGLIGLAVSRVTGGNTGSNFGQVVDASLQ 488

Query: 493 LCKEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTH 542
                   A+ L ++IAL        L +     I   +  +R  D   + +
Sbjct: 489 DS------AKVLDQQIALFGQTVQGLLMKHKKGIIDRQYEMHRVADAAINIY 534


>gi|73539029|ref|YP_299396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72122366|gb|AAZ64552.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 387

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 142/374 (37%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E WD+    P    L R++   GL    +  ++        +++             
Sbjct: 36  PHAEAWDEAGSFP--RELYRKAAEAGLLQPGFPEAYGGAPCDAFYRMILFEERAWGGSGG 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +      A  +A + +  +     P+I S E                 L +TE   
Sbjct: 94  IASGLFSHTIGAPPIAAVGSEAMKARVLPQILSGE-------------KISALAITEPGA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A +T+   +  D  Y ++G K +++S M   +  +A   G  G   V  LL +G  
Sbjct: 141 GSDVAHLTTSACREGDH-YVVNGTKLYITSGMRADYFTVAVRTGDPGASGVSLLLIEGDT 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL    LK K+G  ++ T +L F N       L+G+       +        L  A  +
Sbjct: 200 PGLSRTELK-KMGWWASDTAQLYFDNCRVPVDNLIGEEGKGFAAITKNFNHERLALAAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               +V   +A+ +A  RH  G  L D  V++  + D+A  I A  A+   LA   D+  
Sbjct: 259 CGYAQVCFHDALAWAGDRHTFGKRLADHQVVRHQLVDMATRIEATRAMLDDLAARLDDGA 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   + A A+ MA  T  +C   A       ++ +GG GY+    + R YRE     I  
Sbjct: 319 APVAQIAMAKNMATRTFQFCADRA-------VQLLGGMGYMRGSRVERLYREVKVMMIGG 371

Query: 445 GSGNAMVLDVLNLL 458
           G+   M       L
Sbjct: 372 GAEEIMKDLAARQL 385


>gi|325676129|ref|ZP_08155810.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553039|gb|EGD22720.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 388

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 131/373 (35%), Gaps = 30/373 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   ++     G++       +  +       ++         +     M     
Sbjct: 40  EYPEKWIEQMK---QIGIYGLAVPEEYGGMPVSMPCYVQVTEELARGWMSLAGAMGGHTV 96

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A ++A   T      + P + +               +   + LTE  GG+D+ A+T+ 
Sbjct: 97  VAKLLAQFGTDEQKSRYLPDMATG-------------KLRATMALTEPGGGSDLQAMTTA 143

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRL 275
            ++  D +       W  ++  S    +L + +         V  +L +  P GL   R 
Sbjct: 144 ARQDGDDLVVTGAKTWISNARRSGLIALLCKTDPAAQPRHTGVSVVLVEHGP-GLTVSRD 202

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   T EL F          L      G  + MK L    L  A  ++     +
Sbjct: 203 LPKLGYKGVETCELSFDGYRVPATAILGGTPGKGFAQMMKGLETGRLQVAARALGVGAAA 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +++ YAR+R   G  +     +   +AD+A  + AA  L+   A  +D       EA 
Sbjct: 263 LEDSLAYARQRETFGVPIHKHQSIGNYLADMATKLTAARQLTRYAAERYDRGDRCDMEAG 322

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  + A  +  +A+   GG GY  E  + R+ R++P   +  G+     
Sbjct: 323 MA-------KLFASETAMEIALDAVRIHGGYGYSTEYDVERYLRDAPLMIVGEGTNEIQR 375

Query: 452 LDVLNLLEKGTNL 464
             + + L     L
Sbjct: 376 NVIASQLVARGGL 388


>gi|229489141|ref|ZP_04383007.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324645|gb|EEN90400.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 392

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 87/419 (20%), Positives = 143/419 (34%), Gaps = 44/419 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
                  +  ELE + +   +         A + TP    +   G         P   + 
Sbjct: 11  AERRSPWMDDELEAVADLARN-------FFAKHVTPHQKRFASQG--------FPD-KSA 54

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R     GL        +       AH        +MA   +  L   S      +    
Sbjct: 55  YRELGALGLAGMSIPTEYGGGGGTFAHDAVLFHEQVMAGDHSLQLGVHSGIVPHYLNAYA 114

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                  W PK+ S E+                + +TE   G+D+  IT++  +  D  Y
Sbjct: 115 DHEHKLRWLPKLVSGEW-------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-Y 160

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRS 283
            +SG K F+S+    D  I+ A+ +  +G   V  ++   D +  G    R+  K+G + 
Sbjct: 161 LISGAKTFISNGRNCDLVIIAAKTDPSLGARGVSLIVAEVDDNTPGFERGRILEKVGQKG 220

Query: 284 NATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL F          L     TG  + M+ L    L   + + + M  ++A  + Y 
Sbjct: 221 QDTTELFFDRLRVPATNLLGDREGTGFAQLMQQLLPERLICGVAATAAMDRAVALTVEYT 280

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R++ G  L D    +  +A+ A     +           D+   +          A +
Sbjct: 281 KSRNMFGQTLFDLQNTRFELAECASIARISRTF-------IDDCIVKYLAGQLDATTAAM 333

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            KYW      AVI   ++  GG GYI E  IA+ Y ++    I  GS   M   V   L
Sbjct: 334 AKYWLTDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVMKDLVARSL 392


>gi|256371122|ref|YP_003108946.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007706|gb|ACU53273.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 404

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 142/415 (34%), Gaps = 42/415 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             L+   Q+L   A+    +     P    WD+ E  P    ++  +   GL+   +D  
Sbjct: 6   LALTDEQQQLREWAHTFAAE--TIRPAAHEWDEREETP--RPIIEEAARIGLYS--YDFM 59

Query: 124 FEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                 K    +      L          +  S  + S +    TP    +W P+ F   
Sbjct: 60  LNAFADKTGLTMPLVLEELCWGDAGITLAIFGSTLAVSGIVANGTPEQIAEWVPQCFGTA 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMS 240
             P                ++E   G+D++++ ++       D         W  +  ++
Sbjct: 120 DHP----------NLAAFCVSEPDAGSDVSSLRTRAVYDPATDTWTLNGTKTWITNGGIA 169

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  +++A VE  +G       +   +  GL   +   K+G R++ T E+   +       
Sbjct: 170 DIHVVVASVEPELGARGQASFVIAPNTPGLRMGQKFKKMGIRASHTAEVILEDVRLPGSA 229

Query: 301 DLN------------VSTGPVEDMKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRH 343
            L                   +    +   ++        +V   R +   A+ YA+ R 
Sbjct: 230 LLGGKERLDERLARAREGKRAQSQAAMATFEASRPLVGAQAVGIARAAYEWALDYAKERV 289

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +I+   +   +AD+AL +  A  L  R A    + +              + K  
Sbjct: 290 QFGRPIIENQGIAFKLADMALAVDTARLLVHRAAWMAAQGQRFEHA------EGSMAKLH 343

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ++A  V  EA++ +GG GY+ E  + R +R++   +I  G+     L +   +
Sbjct: 344 AGEVAVRVTEEAIQILGGYGYVRENPVERWHRDAKIYTIFEGTSEIQRLIIARAI 398


>gi|103488487|ref|YP_618048.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978564|gb|ABF54715.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 387

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 129/388 (33%), Gaps = 42/388 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +R+ +    PA   L                 GL        +       +  +   R  
Sbjct: 19  QRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEEYGGAGMNISQYVGFIREL 78

Query: 142 LMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             A      ++S ++      +    T +    W PK+ S                    
Sbjct: 79  AYAAPAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASG--------------SIAAF 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLV 258
           GLTE   G+D AA+ ++     +G       ++  ++P +D  +++A+           V
Sbjct: 125 GLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITNAPFADVILVMARTNAEALPKNAHV 184

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L      G+   +   K+G   +   ++   +      GD  +        +  +  
Sbjct: 185 SAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHV--DGDALLGGEEGIGFRAAMQS 242

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  +SV+   V  A+      + YA  R   G  +    +++  +AD   +I AA  +
Sbjct: 243 LDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAADCM 302

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                   D  +    EAA        TK +  +M   V    ++  GG+GY++E    R
Sbjct: 303 LNDACARADRGEKILVEAA-------ATKMFASEMCGRVADRVVQIHGGAGYLKEYLAER 355

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            YR+     I  G+     L +   + +
Sbjct: 356 FYRDCRIYRIYEGTTQIQQLVIAKNMIR 383


>gi|294632223|ref|ZP_06710783.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835556|gb|EFF93905.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 401

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +  A++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQAIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    +     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDIRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+  K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 SSKAVKDGDEYVLTGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPADRVLGGVTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++R   G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVRYAQQRSTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGQRNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|221042746|dbj|BAH13050.1| unnamed protein product [Homo sapiens]
          Length = 357

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 123/342 (35%), Gaps = 25/342 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R++   G                +                    +S     A M+    
Sbjct: 1   MRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFG 60

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                  + P + + E                   LTE   G+D A++ +  +K  D  Y
Sbjct: 61  NEEQRHKFCPPLCTME-------------KFASYCLTEPGSGSDAASLLTSAKKQGDH-Y 106

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+S    SD ++++ +  G  G   +  ++ +    GL + + + K+G  S  
Sbjct: 107 ILNGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQP 165

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F +    +   +     G +  ++      ++ A  S+     S+     +   R
Sbjct: 166 TRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVR 225

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L     ++  +AD+A  + AA  +    A +        EE   A  +  + K 
Sbjct: 226 KQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVAL------QEERKDAVALCSMAKL 279

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 280 FATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 321


>gi|149185275|ref|ZP_01863592.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21]
 gi|148831386|gb|EDL49820.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21]
          Length = 579

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/502 (17%), Positives = 175/502 (34%), Gaps = 65/502 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
               A  P +V   +E +G++     A  L R+ +    +L      G     V     +
Sbjct: 27  ERFAAAEPDMVEAIVEGVGQFAAGEFA-PLNRVGDLEGAKLE----NGV----VRLPDGY 77

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                  +  G +       F                   A +    L   SV +   + 
Sbjct: 78  ADAYAHYVEQGWNAIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSVGAIEALE 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  + + + P + S ++  T             + LTE + G+D+ A+ +  + I++
Sbjct: 138 HHGSEELQQKYLPDLVSGKWSGT-------------MNLTEPQAGSDVGALRTTAKPITE 184

Query: 224 G----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED---- 264
           G     + + G K +++    +       ++LA++         +  F VP+        
Sbjct: 185 GEHTGKFLIKGQKIYITWGEHELAENIIHLVLARLPDAPEGSRGISLFTVPKYHVKPDGS 244

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G+ N L    L++K+G  ++ T  + + +     G L+G  N     +  M     ++ 
Sbjct: 245 LGAHNDLRCVSLEHKLGINASPTCVMSYGDNDECIGELVGTENRGLAAMFTMMNNARINV 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATA 371
               V     +  +A+ YA+ R  S            +I+ P ++R +  +      A A
Sbjct: 305 GNQGVQIGERATQQALDYAKERVQSARAGSPDKAAVSIIEHPDVRRMLLRMKALTEGARA 364

Query: 372 LSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           + +  A   D      E A A   ++ P+ K W   +   V +  ++  GG G +EE   
Sbjct: 365 VLYYTAGQVDRGVLGDEAAKARGEVLTPLIKAWGTDIGIEVASLGIQVHGGMGLVEETGA 424

Query: 431 ARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
           A+H+R+S    I  G+       L    L          L   + +D             
Sbjct: 425 AQHWRDSRIAPIYEGTNGIQAADLVTRKLGLDNGEALIGLTKEIARDCADYP-------- 476

Query: 489 DSISLCKEDKGLARFLTEKIAL 510
              +L  +   +A+++ E+ +L
Sbjct: 477 ALFALAGDCAAVAKWMREEASL 498


>gi|89902922|ref|YP_525393.1| butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89902931|ref|YP_525402.1| butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89347659|gb|ABD71862.1| Butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89347668|gb|ABD71871.1| Butyryl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
          Length = 383

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 127/376 (33%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D  + +P  HA++ +    GL  +     +  +        +         +  
Sbjct: 25  PVARQYDLADEYP--HAIVEQMKELGLFGATIGEEYGGLGLSAWTYAQIVIKVASVWMAP 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +  + +AS +    T    + + PK+ + E                 LGLTE   G
Sbjct: 83  SGIFNSHLIAASAIERNGTEEQKRKYLPKMATGEMRG-------------SLGLTEPNAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGS 266
           +D+ AI +  +   D         W  +S      ++L + +         +  L+ +  
Sbjct: 130 SDLQAIRTVAKLDGDHYVVNGSKTWITNSLHGHMTLLLVKTDPEAQPRHKGMSMLIAEKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAI 322
           P G        K+G R+  T +L F +        L G              L  ++ A 
Sbjct: 190 P-GYNVDGKLKKMGYRAIDTCQLSFDDYRVPKENLLGGVEGRGFIQTAGGLELGRINVAS 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                   SL  A+ YA+ R   G  +     ++  +AD+   +  A  L    A  +D 
Sbjct: 249 RGAGIAEGSLKMALRYAQERSAFGKPIWQHQAIQLKLADMVTQVEGAKRLIENAARKYDS 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EAA A++        C +       EAM   GG     E  I R YR+S    I
Sbjct: 309 GERCDLEAAMAKLAGSEAGVHCSQ-------EAMRIFGGYSLSVEYEIERFYRDSMLMVI 361

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   +   +   L
Sbjct: 362 GEGTNEILRQVIAKQL 377


>gi|323450396|gb|EGB06277.1| hypothetical protein AURANDRAFT_60198 [Aureococcus anophagefferens]
          Length = 428

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 10/279 (3%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
              AP          GL+E   G+D  A ++  +   D         W  ++  +DA ++
Sbjct: 133 EFLAPFAAGEKLGCFGLSEPGNGSDAGAASTTARDDGDAWVLNGTKAWITNAHEADAAVV 192

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
            A  +  +    +   L D    G      ++K+G R ++T  L   +        L   
Sbjct: 193 FATTDKSLKHRGISAFLVDTKAEGFSVGAAEDKLGIRGSSTANLIMEDCRIPKSCLLGER 252

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    M+ L    +  A  ++   + +L  A  YA  R   G  L +   ++  I+++
Sbjct: 253 GDGFKIAMRTLDGGRIGIAAQALGIGQAALDVAATYAADRTAFGKPLTNLYAIQLKISEM 312

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  L++R A+  D   + +++AA A++ A     +          +A++ +GG 
Sbjct: 313 ACKLEAARLLTWRAASRKDAGLAYTKDAAMAKLCASEAATFA-------AHQAIQVLGGM 365

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           GY+ +    R YR++    I  G+     + +   + K 
Sbjct: 366 GYVSDMPAERFYRDARITEIYEGTSEVQHVVIALNVLKA 404


>gi|4501857|ref|NP_001599.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Homo sapiens]
 gi|223590148|sp|P28330|ACADL_HUMAN RecName: Full=Long-chain specific acyl-CoA dehydrogenase,
           mitochondrial; Short=LCAD; Flags: Precursor
 gi|177962|gb|AAA51565.1| long chain acyl-CoA dehydrogenase [Homo sapiens]
 gi|24660234|gb|AAH39063.1| Acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|40352988|gb|AAH64549.1| Acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|62822332|gb|AAY14881.1| unknown [Homo sapiens]
 gi|119590887|gb|EAW70481.1| acyl-Coenzyme A dehydrogenase, long chain [Homo sapiens]
 gi|123979764|gb|ABM81711.1| acyl-Coenzyme A dehydrogenase, long chain [synthetic construct]
 gi|123994531|gb|ABM84867.1| acyl-Coenzyme A dehydrogenase, long chain [synthetic construct]
 gi|446551|prf||1911479A long chain acyl-CoA dehydrogenase
          Length = 430

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 126/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         +  ++   GL           +                +     
Sbjct: 73  IPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+  +SD  I++A    E       +   L +  
Sbjct: 180 DLQGIKTNAKKDGSD-WILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 239 MKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIADV 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y ++R   G  +     ++  +A++   I    A         D  
Sbjct: 299 AISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV-------DNC 351

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 352 LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|94500787|ref|ZP_01307316.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
 gi|94427109|gb|EAT12090.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65]
          Length = 596

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 92/501 (18%), Positives = 179/501 (35%), Gaps = 70/501 (13%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+ + PQ           +KV   P      +     GL  +        +         
Sbjct: 59  ADEHEPQFDG--------EKVSTIPEVKEAWKHFSESGLLNARHSYDDGGMQLPALINSA 110

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              L+  A          +  +A+++    +      + P +F+  +  T          
Sbjct: 111 CCGLFTSANPGTAGYPFLTSAAANVIQAFGSDEQKAKYLPGMFNGRFSGT---------- 160

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251
              + LTE   G+ +  +T++     DG Y L G K ++S    D       ++LA+VEG
Sbjct: 161 ---MALTEPDVGSSLGDLTTKAIPQEDGSYKLKGQKMYISGGDQDITENIVHLVLARVEG 217

Query: 252 ------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGF 297
                  +  F+ P+ L +        N +    L +K+G R   +  L F    N  G+
Sbjct: 218 ANKGVKGISLFITPKFLVNDDGSLAERNDVKLAGLLHKMGYRGTTSTVLSFGEEDNCTGY 277

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------- 348
           L+G+     G +  M     +   + +         E++ YA+ R   G           
Sbjct: 278 LIGEEGKGLGYMFKMMNEARIGVGLGAAMIGYRGYLESLDYAKNRPQ-GRKPSSKDSSSK 336

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYW 403
              +++   +KR +      +  + AL    +   DE ++     +     ++ PI K +
Sbjct: 337 PLNIVEHADVKRMLLAQKSYVEGSLALCLFASRLVDEHEAGGHADSGILLDLLTPIVKSF 396

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
                      A++ +GG+GYI E  + + YR++  N I  G+     LD+L   L  K 
Sbjct: 397 PSSYGLKANDYAIQVLGGAGYIREYPVEQCYRDNRLNPIHEGTYGIQSLDLLGRKLWMKN 456

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA-----------L 510
           +   + L   ++  L  +  K +  L   I   ++   +   +  ++            L
Sbjct: 457 SQGLQLLMERVQNTLKQA--KDLASLAPQIKRYQQKLNVFSQVVMQLGQSLQSGKVDETL 514

Query: 511 ASSAAALYRAGMNDIADVFLE 531
           A+SA  L   G   +A +++E
Sbjct: 515 ANSALFLDMMGKMVVAWLWIE 535


>gi|160896146|ref|YP_001561728.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361730|gb|ABX33343.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 380

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 130/374 (34%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    + R++  +GL   +    +        H               
Sbjct: 31  PHHAEWERQGIVP--KEVWRKAGREGLLNPMLPEPYGG-GGDFGHAAVLLEEIARTGASG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    +      W P++ + E             +   + +TE   G
Sbjct: 88  LGFPLHSDIVAPYIHAYGSKAQKDRWLPRMAAGE-------------LIGAIAMTEPGAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ ++ +  ++  D  Y L+G K F+++ + S+  I++A+    +G   V  ++ +   
Sbjct: 135 SDLKSVRTTARREGDH-YVLNGQKTFITNGINSELVIVVAKTAPEMGAKGVSLIVVEDGM 193

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    R   KIG  +  T EL F N       LLG+ N     +        L  A+ +
Sbjct: 194 PGFSKGRKLEKIGLMAQDTSELFFDNVRVPADHLLGEENAGFRYLMHELAQERLVVAVRA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + +   L + I Y R R   G  + D    +  +A+                   D+  
Sbjct: 254 AASIEAFLHKTIAYTRERKAFGQPVFDFQNTRFKLAEAKAQATMLRVFV-------DDCI 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +     A A   A + K     +   ++ E ++  GG GY+ E  I R + ++    I  
Sbjct: 307 ALHLRRALAPDRAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQIGRAWTDARIGRIYG 366

Query: 445 GSGNAMVLDVLNLL 458
           GS   M   +   L
Sbjct: 367 GSDEIMKEIIARTL 380


>gi|114047951|ref|YP_738501.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889393|gb|ABI43444.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7]
          Length = 596

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 101/547 (18%), Positives = 197/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D ++      +   I A  +     +
Sbjct: 62  VQGCKLVDGKVVTPEGFADAYQQFVDNGWPTLTCDPAYGGQGLPEVVGIFATEMQTSTNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + S +       + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYSAIHAHAGEALKQKYLAKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++    +DG + ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G  N L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  S+       A  A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDLGSSGKK------VITILRDSISLCKEDKGLARFLTE--KIALASSAAALYRAGM 522
            + + + S GK       V  ++  +  L K    LA        I  A+S A L   G+
Sbjct: 469 LVTEFIQSQGKDPQMQPYVSGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGI 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|192289955|ref|YP_001990560.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283704|gb|ACF00085.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 374

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 141/372 (37%), Gaps = 31/372 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P  H + + +   G+    +  S+         +  A      A   +
Sbjct: 24  PRAAELDRSGEPP--HQVHQAAAKLGIPGLPYPESYGGGGADIFAQCVAMEEMARACASS 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  S    S V    +        P++ + E                  GLTE +GG
Sbjct: 82  ALSLG-SSWILSAVVDFGSKDQQDRIVPQMVAGE-------------ARSAWGLTEPKGG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           +D+ A +++  +  DG       ++  +   +D +++ A+  E R G FLV     + + 
Sbjct: 128 SDLMAASTKATRTGDGWIINGVKRFITNGGWADWYMVFARTSEKRFGLFLV-----NKAD 182

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+ +   + K+G R++ T ++   N       LLGD       +    +   +  +  +
Sbjct: 183 PGVSFGAREKKMGMRASPTSDVILDNVIVPEWRLLGDPERGAEYINKALLKSRMQMSAHA 242

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +L EA+ Y + R   G  + +  +++  +AD+A+ + AA A        +    
Sbjct: 243 LGIAGAALTEALRYTKERVQFGQPVAEFQLVRGLVADMAIKVEAARATLRSACELYIGGD 302

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A+  A I K  C   A AV  +A++  GG GY+++  + R  R++    I  
Sbjct: 303 PA------AKTQASIAKVLCSDAAMAVTTDAVQLHGGYGYLQDYPVERMMRDAKVTQIWE 356

Query: 445 GSGNAMVLDVLN 456
           G+     L +  
Sbjct: 357 GTNQIHRLMIAK 368


>gi|304310681|ref|YP_003810279.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796414|emb|CBL44622.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 379

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 130/362 (35%), Gaps = 35/362 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS-ASMV 162
             +   +   G  C   D  +  +  +     +     L    E+G  +       A  +
Sbjct: 43  REIWELAGEFGFLCPFADEEYGGMALRDFRFSQIMTEELGRICESGFALGLHNDVIAPYI 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      W P I S                 + + +TE   G+D+ AI ++ +   
Sbjct: 103 EAYANAEQKARWLPDIISG-------------KAILAIAMTEPSTGSDLQAIKTRLEDKG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
              Y L+G K F+S+ +    +++A          V  ++ +   +G    R   K+G +
Sbjct: 150 SH-YILNGAKTFISNGILSDLVIVAAKAPE----GVTLVVVERGMDGFKRGRRLEKMGLK 204

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
           S  T EL F N     +   NV   P +    L+       L  AI +V+  + + +E +
Sbjct: 205 SQDTAELFFENVT---IPKANVLGAPGQGFVYLMQKLAQERLVCAIGAVATAQFAFSETL 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  +      +  +A++  ++         L    +  +  SEEA  A+  
Sbjct: 262 KYVKERTAFGKPIGTFQNTRFGLAEMRTEVTIGQNFVDTLVMKLNAGQISSEEACMAKW- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 WC  M   V+ + ++  GG GY+ E  IAR Y ++    I  G+   M   +  
Sbjct: 321 ------WCTDMVNRVVDKGVQFHGGYGYMLEYPIARAYVDARIQPIFAGTNEIMKEVIGR 374

Query: 457 LL 458
            L
Sbjct: 375 GL 376


>gi|297690739|ref|XP_002822766.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform
           3 [Pongo abelii]
          Length = 365

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 123/342 (35%), Gaps = 25/342 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R++   G                +                    +S     A M+    
Sbjct: 1   MRKAAQLGFGGVYVQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFG 60

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                  + P + + E                   LTE   G+D A++ +  +K  D  Y
Sbjct: 61  NEEQRHKFCPPLCTME-------------KFASYCLTEPGSGSDAASLLTSAKKQGDH-Y 106

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            LSG K F+S    SD ++++ +  G  G   +  ++ +    GL + + + K+G  S  
Sbjct: 107 ILSGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQP 165

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F +    +   +     G +  +K      ++ A  S+     S+     +   R
Sbjct: 166 TRAVIFEDCAVPVANRIGSEGQGFLIAVKGLNGGRINIASCSLGAAHASVILTRDHLNVR 225

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L     ++  +AD+A  + AA  +    A +        EE   A  +  + K 
Sbjct: 226 KQFGEPLASNQYLQFKLADMATRLVAARLMIRNAAVAL------QEERKDAVALCSMAKL 279

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +      A+  +A++  GG GY+++ ++ ++ R+S  + IL 
Sbjct: 280 FATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 321


>gi|284035996|ref|YP_003385926.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283815289|gb|ADB37127.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 606

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 82/480 (17%), Positives = 175/480 (36%), Gaps = 69/480 (14%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y+         +  + N P+L      G+    V  HP     L+     GL  + +   
Sbjct: 47  YIADTLMHPYLKDIDKNQPELK----NGQ----VTVHPKVKEYLKAVGEAGLIGAGFPFE 98

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                  +          LMA          +  +A ++    +P + + + P + +  +
Sbjct: 99  HGGQQLPE-MISSCVGFILMAANNGMMYTGLTSGAAHLITSFGSPELSETYVPNMLAGTW 157

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSP 238
             T             + LTE + G+ ++ +T+    + D     G Y + G K F+S+ 
Sbjct: 158 QGT-------------MALTEPQAGSSLSDVTTSATPLPDDQFGPGAYKIKGQKVFISAG 204

Query: 239 MSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRS 283
             D       +MLA+++G       +  F+VP+   DG+     N +    + +K+G + 
Sbjct: 205 DHDAVENIVHLMLARIDGAPKGTKGISLFVVPKYRPDGNGGFVDNDVTSTGVYHKMGQKG 264

Query: 284 NATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              + L      +T G+++G  +     +  M     +   + + +    +   A+ YA+
Sbjct: 265 VPAMHLTMGTNDDTIGYIVGQPHQGLPYMFQMMNEARIGVGMTAAAIATAAYHAALEYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKS 385
            R  S               +I+ P ++R +         + +L    A  +D    A+ 
Sbjct: 325 ERPQSRRLNQKNLLDAPQTPIINHPDVRRMLLFQKAVTEGSLSLLIEAARLYDISEVAEG 384

Query: 386 RSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             +E A     ++ P+ K +  +M    ++++++  GG G+ E+  + + YR+     I 
Sbjct: 385 GEKENAFLLLDLLMPVAKSYPSEMGVQSVSQSLQTFGGYGFTEDFPVEQLYRDIRITPIY 444

Query: 444 LGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLG-----SSGKKVITILRDSISLCKE 496
            G+      D+L      KG    + LF+ + + +         K     L   +   +E
Sbjct: 445 EGTTGIQAQDLLGRKMTIKGGKAPQLLFAEISKLIAEASTFDDLKPYADQLTAELKRTQE 504


>gi|15789941|ref|NP_279765.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|169235662|ref|YP_001688862.1| acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|10580351|gb|AAG19245.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|167726728|emb|CAP13514.1| putative acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum
           R1]
          Length = 379

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 27/305 (8%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  + L  T    ++W               P+ +        LTE   G+D + +++  
Sbjct: 95  AKPIELFGTAEQKREWL-------------RPLAEGDYLGAWALTEPTSGSDASDMSTTA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +  D        ++  ++ ++ + ++ A  +   G   +   + D + +G       +K
Sbjct: 142 TRDGDDYVLNGTKQFITNASVAGSVVVKAVTDPDAGYDGISTFIVDPADDGFEVTAEWDK 201

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH- 337
           +G  ++ T E+ F N        L          K    LD   +S++ +   LA+  + 
Sbjct: 202 MGLNASPTCEISFDNCRIPADRLLGEEGDGWTQTK--KTLDGGRISIAALSTGLAQGAYT 259

Query: 338 ----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               YA  R   G  +     ++  + D+   I  A  L+ R A+ +D  +S + E+A A
Sbjct: 260 AASEYATDREQFGQPISRFDAVRNTLVDMHRKIERARLLTRRAASKYDAGESVTRESALA 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++ A        + A  V  +A++ +GG GY  + +  R +R++    I  G+     L 
Sbjct: 320 KLDA-------SEAAREVAEDAVQTLGGYGYTTDFAPQRFFRDAKLMEIGEGTSEIQHLV 372

Query: 454 VLNLL 458
           +   L
Sbjct: 373 IGREL 377


>gi|227831420|ref|YP_002833200.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|229581023|ref|YP_002839422.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|284998956|ref|YP_003420724.1| Butyryl-CoA dehydrogenase [Sulfolobus islandicus L.D.8.5]
 gi|227457868|gb|ACP36555.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|228011739|gb|ACP47500.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|284446852|gb|ADB88354.1| Butyryl-CoA dehydrogenase [Sulfolobus islandicus L.D.8.5]
          Length = 400

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRVSVGGLFITPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A I +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPAAGSDVAGIQTIAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  A+ FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAASLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|182434967|ref|YP_001822686.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775484|ref|ZP_08234749.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463483|dbj|BAG18003.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655817|gb|EGE40663.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 401

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 128/379 (33%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  QLEHRDEYPTEIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDTFLPRMALGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+G K  +         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 SSKGVKDGEEYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL   +        L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDDLRIPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|302525971|ref|ZP_07278313.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302434866|gb|EFL06682.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 383

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 24/370 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + W++    P    L R++   GL    +  S           +  A     A       
Sbjct: 31  DDWERAGELP--RDLHRKAGQLGLLGVAFPESAGGGDGNYLDALVVAEEMHYAG------ 82

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  + ++     +  P + +   P    R   PT      +      L +TE  GG+D+
Sbjct: 83  GSGGLFASLFTCGIAVPHIVEAGDPVQIERWVRPTL-----EGEKIGSLAVTEPDGGSDV 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A I +   +  D  Y L+G K F++S     F+      G  G   +  ++ +    G  
Sbjct: 138 AGIRTTAVREGDE-YVLNGAKTFITSGCRADFVTTVVRTGEAGAHGLSLIVVERGTPGFT 196

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G  ++ T EL + +       L+G  N     V    +   L  A+ + +  
Sbjct: 197 VSRKLEKMGWAASDTAELSYVDVRVPAENLVGAENSGFAQVATQFVTERLSLAVQAYAHA 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +L   + + R R   G  LI + +++  + ++A  +  A   + ++A      +    
Sbjct: 257 QRALDLTLDWCRMRETFGRPLISRQLVQHKLTEMAGKVDVARTYARQVALRHVSGEEVIA 316

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA +A+  A  T  W       V+ EA++  GG GY+ E  + RHYR+     I  G+  
Sbjct: 317 EACFAKNTAVQTAEW-------VVNEAVQLHGGLGYMRESEVERHYRDVRILGIGGGTTE 369

Query: 449 AMVLDVLNLL 458
            +       L
Sbjct: 370 ILTGLAAKRL 379


>gi|312115776|ref|YP_004013372.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220905|gb|ADP72273.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 385

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 136/370 (36%), Gaps = 27/370 (7%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W++ E  P+ H L ++    G+  + +D ++  +    ++    A        
Sbjct: 22  INPFVDEWERAEEFPS-HELFKKLGGLGVLGTKYDEAYGGLGLDFSYSATVAEALGTCDC 80

Query: 147 E--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +   S  +   +    +  + + W              AP     +   LG++E
Sbjct: 81  GGVPMAIGVQSDMATPALHRFGSEELKRAWL-------------APTIAGDMVACLGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A++ +  +K            W  +   +D   +LA             ++  
Sbjct: 128 PGAGSDVASLKTTAKKDGGDYVINGSKMWITNGMKADWCCLLANTSDDKPHRNKSLIVVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G+  Q++  K+G  S+ T +L F +        +     G    M       L  A
Sbjct: 188 MDAKGITRQKI-RKLGMFSSDTAQLFFDDVRVPQTNLIGAEGMGFTFQMLQFQEERLWGA 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S++ +   +   I Y R+R   G  ++D  V+   +A++  ++ A  +L++R    + 
Sbjct: 247 ANSLTMLDRLIDATIDYTRQRKAFGKSILDNQVVHFRLAELRTEVEALRSLTWRAVEEYI 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++       +A + K  C ++   V    ++  GG G+  +  ++R  R+    S
Sbjct: 307 SGRDVTK-------LASMAKLKCGRLIREVTDSCLQYWGGMGFTWDNPLSRAMRDGRLVS 359

Query: 442 ILLGSGNAMV 451
           I  G+   M+
Sbjct: 360 IGGGADEVML 369


>gi|73537716|ref|YP_298083.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121053|gb|AAZ63239.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 395

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 118/305 (38%), Gaps = 25/305 (8%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++  + +  T      + P++ S E             +     LTE   G+D  ++ + 
Sbjct: 93  ASESLVVDGTEAQKDRYLPRLASGE-------------LTGCFALTEPDAGSDATSLRTT 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLK 276
            ++  D         +  ++P++D F + A+ E  V G   +   L +    GL     +
Sbjct: 140 ARREGDHYVLDGTKCFITNAPIADLFTVFARSEPGVAGAPGISAFLIERGTPGLTTGPAE 199

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
            K+G   +   ++   N        +     TG    MK L    ++ A + +      +
Sbjct: 200 RKMGQHGSPVGDVYLENCRVPASAIVGGKPGTGFKTAMKALNKQRINLAGLCIGPAVRLV 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            E + YA RR   G  + D  ++++ IAD   ++ AA AL    A   D  +  + EA+ 
Sbjct: 260 DEMVRYATRRSQFGKPIADYQLVQQMIADSNTELHAARALVLETARRRDNGEDVTMEASM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            ++       +  +MA  V   A++  GGSGY+      R YR+     +  G+     L
Sbjct: 320 CKM-------FASEMAGRVADRAVQVFGGSGYMARTVAERFYRDVRVFRLYEGTTQIHQL 372

Query: 453 DVLNL 457
           ++   
Sbjct: 373 NIARR 377


>gi|309812986|ref|ZP_07706714.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433058|gb|EFP56962.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 388

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 146/402 (36%), Gaps = 34/402 (8%)

Query: 65  VLSCTAQELARMANYNTPQ-LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +    ++L R+A   + +         E+      H     +  ++   GL        
Sbjct: 13  WMDDELEDLQRLAATFSREIFANIDRYSEQ------HQVDRDVWTKAGELGLLGLSVPEE 66

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +       AH+   A     A  ++   +  ++     +    T    + W PK+ S E+
Sbjct: 67  YGGSGATFAHEAVVAIEQAKAGDDSWGFVVHAIIVTHYIVAYGTEEQKRKWLPKLCSGEW 126

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                           +G+TE   G+D+  ++++  +  D         +  ++  +D  
Sbjct: 127 -------------VGAVGMTEPGAGSDLKRVSTRAVRDGDEFVINGSKTFITNAGHADLI 173

Query: 244 IMLAQV---EGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
           +++A+    +   G   +  ++ E    +G    R+  KIG     T EL F++      
Sbjct: 174 VLVARTCERDKAAGHKGISLIVLETADLDGFERGRVLQKIGQHGQDTRELHFTDMRVPVA 233

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG+       + +      L  A  +V    +++   + +A+ R +  G L+D    +
Sbjct: 234 NLLGEEGRGFYHLMEQLPQERLGLACTAVGSAELAVKLGVEHAKSRELFDGTLMDLQNTR 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A+ + D+ AA  L         E K  S  A+ A       KYW   +   VI   +
Sbjct: 294 FVLAECSTDVLAARTLLDHCIMLHMEGKLDSATASRA-------KYWTTDVQCNVIDRVL 346

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG G++ E  IA+ Y  +    I  G+   M   +   L
Sbjct: 347 QLFGGYGFMLEYPIAKMYAGARIQKIYGGANEVMKELIARSL 388


>gi|256394399|ref|YP_003115963.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360625|gb|ACU74122.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 381

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 139/404 (34%), Gaps = 37/404 (9%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           GE V +      A   N   P+   +   G       F  A   + + +   GL C+   
Sbjct: 8   GEDVEAVRELAAAFFTNEALPREEEFAAQG-------FPSA--EIWQAAGKVGLLCASIP 58

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +       AH++      + +   A  +   +   A  +    T      W P++ + 
Sbjct: 59  EEYGGGGGTFAHEVAITEAQMRSGAGAMAIAVHAGIVAHYLNAYATEEQKLRWLPRMAAG 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +   + +TE   G+D+  + ++  +  D  Y ++G K F+++  + 
Sbjct: 119 E-------------LIGAIAMTEPGTGSDLQNVATKAVREGDE-YVITGAKTFITNGHTA 164

Query: 242 AFIM-LAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
             ++ +A+ +   G   V  L+        G    R+  K+G  S  T EL F       
Sbjct: 165 GLVVIVAKTDTSQGAHGVSLLVAEVGDDTPGFQRGRVLKKVGQHSTDTAELFFDGLRVPA 224

Query: 299 LGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              L      G V+ M  L    L  A + ++ +  ++   + Y + R   G  L     
Sbjct: 225 ENLLGGVEGQGFVQLMLQLPQERLLVAAIGMAMLEAAVDYTVAYTKEREAFGKPLFKLQN 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +A+ A     A          FD+   +          A + KYW       VI  
Sbjct: 285 TRFELAECATIARVARVF-------FDDCVVKHLAGGLDATTASMAKYWITDRQTEVIDR 337

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++  GG GY+ E  IAR + +     I  G+   M   +   L
Sbjct: 338 CVQLHGGYGYMLEYPIARLFADGRVQRIYGGANEIMKELIARSL 381


>gi|148547625|ref|YP_001267727.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511683|gb|ABQ78543.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 581

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/470 (18%), Positives = 164/470 (34%), Gaps = 54/470 (11%)

Query: 42  LLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD----- 95
           +L   +    +         +   + +   +E AR        L      G+R       
Sbjct: 13  VLQHWLRADQAWAQLPAYADVDLDLAAQVLEEAARFCEQ---VLAPLNRSGDRQGCQMEG 69

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V     + A  R  +  G        +          +     +   +          
Sbjct: 70  GEVRTPDGFPAAYRAYVDGGWPSLACAPALGGQGLPLVLEAALQEMLFGSNHGWAMYTGI 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +   +    +  +   + P I S              +    + LTE + G+D++ +
Sbjct: 130 AHGAYLCLKAHASAELQARYLPGIVSG-------------ATLPTMCLTEPQAGSDLSLL 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
             +   + DG Y +SG+K F+S    D       ++LA++         +   LVP+ LE
Sbjct: 177 RCRAVPLGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAPPGNRGLSLLLVPKWLE 236

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  N L    L++K+G R +AT  L      G+L+G  +     +  M     L   + 
Sbjct: 237 DGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLAAMFVMMNSARLHVGLQ 296

Query: 324 SVSGMRVSLAEAIHYARRRHVS---GG---------ILIDQPVMKRAIADIALDIAAATA 371
            +     +  +A  YA  R      G           +   P M+R + ++ +      A
Sbjct: 297 GLGHAEAAWQQARDYALERRQMSAPGRAKGGVQGADPIHLYPAMRRVLLELRVRTEGMRA 356

Query: 372 LSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++  A   + A +      R++ A    ++ PI K    +   ++ ++A++  GG GY 
Sbjct: 357 LAYWTAQWLEIADAAVEPAQRAKAATLVALLTPIVKAAFTEQGFSLASQALQVFGGYGYT 416

Query: 426 EERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE 473
           +E +I +  R+S    I  G+       L +  +L  G   F  L   L 
Sbjct: 417 QEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFALLLGELR 466


>gi|284033278|ref|YP_003383209.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283812571|gb|ADB34410.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 396

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 130/382 (34%), Gaps = 33/382 (8%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +  A++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHQDEYPTAIVEGLKELGLFGLMIPEQYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A ++    T    + + P++ +               V     ++E   G+D+AAI
Sbjct: 95  HFIVAYLLLQHGTDEQKQKYLPRMATG-------------DVRGAFSMSEPGCGSDVAAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSPN---- 268
            ++  K  D         W  +   ++   +L + +         +   L +  P     
Sbjct: 142 KTKAVKNGDSYTVNGQKMWLTNGGSANLVAVLVKTDEGADSVYKNMTTFLVEKEPGFGEV 201

Query: 269 --GLCYQRLKNKIGNRSNATVELEFS----NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             GL       K+G +   T EL F     +    L G        + D   +  ++ A 
Sbjct: 202 DQGLTVPGKIEKMGYKGVDTTELIFDGYRIDAGQILGGVPGKGFYQMMDGVEVGRVNVAA 261

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 R +    I YA++R   G  + +   +   +AD+A+ + AA  L  + A   D 
Sbjct: 262 RGCGVARRAFELGISYAQQRETFGRKIAEHQAVLFRLADMAVKVEAAHELMVKAARKKDA 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 EA  A+ +A        +    V+ ++    GG G+ +E  I R YRE+P   I
Sbjct: 322 GSRNDFEAGVAKYLA-------SEYCSQVVEDSFRIHGGYGFSKEYEIERLYREAPMLLI 374

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+ +   + +   L +   L
Sbjct: 375 GEGTADIQRMIIGRRLLEDYKL 396


>gi|225011693|ref|ZP_03702131.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
 gi|225004196|gb|EEG42168.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
          Length = 599

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 91/464 (19%), Positives = 171/464 (36%), Gaps = 49/464 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            L+ +    G        ++  +       +        A               ++ + 
Sbjct: 66  ELMEKIGALGFLGVSVPEAYGGLGMDFVSTMLVCDYISGATGSLSTAFGAHTGIGTLPIT 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + +  K+ + E+                  LTE   G+D  +  ++     D
Sbjct: 126 LYGTEEQKQKYVTKLATGEWFG-------------SYCLTEPGAGSDANSGKTKAVLSDD 172

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y +SG K ++S+   +  FI+ A++E      +   ++     NG+ +   +NK+G 
Sbjct: 173 GTHYLISGQKMWISNAGFASVFIVFARIEDDK--NITGFIVPKDDANGITFGDEENKLGI 230

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM--SVS---GMRVSLAEA 335
            S++T ++ FS T   +    N+  G  E  KI +  L+   +   V+     R   + A
Sbjct: 231 HSSSTRQVFFSETKVPV---ENMLAGRGEGFKIAMNALNVGRIKLGVACLDAQRRITSAA 287

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSE 388
           + YA  R      +     +K  +A +A    A  +  +R A        SF       +
Sbjct: 288 VQYANERIQFNTPIAQFGAIKEKLAHMATSCYAGESACYRAAYDVEKRIQSFVAEGLTHQ 347

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   + K    +         ++ +GG G+  +  +   +R++    I 
Sbjct: 348 EAELKGVEDFAIECSLLKVGASEDIQNAADHGIQIMGGMGFSADMPMESAWRDARIGRIY 407

Query: 444 LGSGNAMV-LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LCKEDKGLA 501
            G+      L V  LL+KG      L S + +   +S K+   I  D  S L +E + LA
Sbjct: 408 EGTNEINRMLSVGMLLKKGMKGQLDLMSAVMKA-ATSIKEDTNIPTDGGSILAEERRLLA 466

Query: 502 RFLTEKIALASSAAALYRAGMN-------DIADVFLENRFLDNC 538
            F    I L  +AA  Y A ++        ++D+F+E  F ++ 
Sbjct: 467 NFKQLFIVLTGNAAQKYGAKLDEHQQILLALSDIFIEIYFTESA 510


>gi|90416082|ref|ZP_01224015.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
 gi|90332456|gb|EAS47653.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
          Length = 582

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 89/497 (17%), Positives = 175/497 (35%), Gaps = 66/497 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
                   +   VV  E     E +++ T        + +   L           +V   
Sbjct: 18  PGFEDASRDMVDVVLPEAARFFEDIVAPTN----HETDKHPAFLKD--------GEVVTS 65

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P  + + R+ +  G  C   D ++          +    +   A      L   +     
Sbjct: 66  PGLNPIYRQMVEAGWCCLNGDSTYGGAGFPSVVDLAVQEMLQTANCGFSLLPMLTRGVVH 125

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + +   + S  +  T             + LTE + G+D++A+ ++   
Sbjct: 126 ALNQYGSDEQKETYLGNLISGAWSGT-------------MNLTEPQAGSDLSAVKTKAIL 172

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED----- 264
             D  Y +SG K +++            ++LA+          +  FLVP+ L +     
Sbjct: 173 NGDH-YLISGQKIYITWGDHSCADNIIHLVLARRPDAPEGNQGISLFLVPKFLVNSDGSL 231

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    +++K+G  S+ T  L F +     G+L+G+ N     +  M     L   
Sbjct: 232 GERNDVKPVGVEHKLGIHSSPTCTLAFGDNGGAVGYLVGEENKGLQCMFTMMNNARLSVG 291

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS------GGI-LIDQPVMKRAIADIALDIAAATALSF 374
              VS    +  +A+ YA  R         G   +I    +KR +  +        A+S+
Sbjct: 292 HQGVSLGERAYQQAVAYAADRVQGRAAGVEGRAAIIHHSDVKRMLMQMRALTEGGRAMSY 351

Query: 375 RLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
               + D      + + RS+ A    ++ P+ K WC +++    +  ++  GG G+IEE 
Sbjct: 352 YAIAAEDRSSHHPDEQVRSQNAQLVELLTPLVKGWCTEVSMESTSLGVQVHGGMGFIEET 411

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTLEQDLGSSGKK---- 482
             A+H R++    I  G+     LD +    L  G    + L + ++  +          
Sbjct: 412 GAAQHMRDARILPIYEGTNGIQALDFIGRKCLRDGGQAVQLLLADMQATVDQLASAHGSV 471

Query: 483 --VITILRDSISLCKED 497
             +   LR  I  C+E 
Sbjct: 472 VDLRNRLRHGIEQCQEA 488


>gi|229488672|ref|ZP_04382538.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324176|gb|EEN89931.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 28/323 (8%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  GH    +      +  +      + W P I + E               + + +T
Sbjct: 81  AAVSFGHYTVSTGIVLPYLLRLANEEQKQRWLPSIATGE-------------KTLCIAMT 127

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLV 258
           E   G+D+A I +  +   DG  Y L+G K F++  + S+  +++A+          F +
Sbjct: 128 EPGTGSDLAGIRTTAKLSEDGTHYVLNGAKTFITGAVNSELCVVVARTSAPAEDDRRFGL 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             ++      G  Y R   K+G R++ T EL F++       LLG+ N     +      
Sbjct: 188 SLMVVPTDAPGFEYGRKLEKLGLRASDTSELSFTDVKVPVADLLGEQNKGFSYLGQNLPR 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L      V+  R ++  A  Y + R V G  +      K  +A+ + ++ AA AL+ R
Sbjct: 248 ERLSIGSRGVASARAAIEFAKAYVQERQVFGKPVAAFQNTKFVLAECSAEVEAAQALADR 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D  +  + +AA         K +  ++A  VI + ++  GG GY+ E  IAR Y 
Sbjct: 308 GIELDDSGELTAADAAR-------IKLFGTEVAARVIDKCLQLHGGYGYMLEYPIARLYA 360

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++  + I  G+   M   +   +
Sbjct: 361 DTRVSRIYGGTSEVMKTIIAKDM 383


>gi|254382188|ref|ZP_04997549.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194341094|gb|EDX22060.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 401

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 129/386 (33%), Gaps = 36/386 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQRDHFLPRMALGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  K  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVKDGDEYVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGQTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  + +   ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLF 465
             I  G+     + +   L +   L 
Sbjct: 375 LLIGEGTAEIQKMIIGRRLLEEYRLQ 400


>gi|94311467|ref|YP_584677.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355319|gb|ABF09408.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans
           CH34]
          Length = 379

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 136/381 (35%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P   A+   G R D+            ++  +GL C      +        H        
Sbjct: 29  PHQEAWDQAG-RVDR--------ETWLKAGREGLLCVAIPTEYGGGGGDFGHSAVVLEEM 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +        S   A  +  + T    + W P I +                 + +G
Sbjct: 80  HRAGISGAGFSLHSDIVAPYINRLGTEEQKQRWLPDICAG-------------KTILAVG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPR 260
           +TE  GG+D+ A  +   +  D  + ++G K F+S+ MS   IML  + +   G   V  
Sbjct: 127 ITEPGGGSDVKACRTTAVRDGDE-WVINGSKTFISNGMSADLIMLVCKTDPAAGARGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
           +L + +  G    R  +K+G  +  T EL F N     G LLG+ N   G +        
Sbjct: 186 ILVETNREGFRCGRKLHKVGQPAADTAELFFDNVRVPAGNLLGEPNQGFGYLMQELAQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ + + +   L   + Y + R   GG + D    K  +AD+  +  A   +     
Sbjct: 246 LIIALYAATALERLLRITLEYVKDRKAFGGTVWDFQNTKFKLADVKANAVALRTMV---- 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D               A I K +  +     I + ++  GG GY+ E  IAR + + 
Sbjct: 302 ---DYYLGEHMRRKLTVNEAAIAKLYSTETLWKCIDDMVQLHGGYGYMLEYPIARAFTDY 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
             + ++ G+   M   +   L
Sbjct: 359 RVSRVVGGANEVMRELIARKL 379


>gi|326381772|ref|ZP_08203465.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199198|gb|EGD56379.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 590

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 106/540 (19%), Positives = 197/540 (36%), Gaps = 65/540 (12%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A         +  L E + +       + A+   PQ    GP G    KV   P     L
Sbjct: 30  AEHSRETFDGILDLSEDMATKLFAPHNKTADRTEPQ---IGPDG----KVVLIPEIGEAL 82

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +     GL  + +D     +         +  ++  A          +V +A+++A   T
Sbjct: 83  KAFGDAGLIAASFDEEIGGMQLPNTVSRASTTIFQAANAATTSYAFLTVGNANLLAKYGT 142

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     W   +    Y  T             + L+E + G+ +A IT++     DG Y 
Sbjct: 143 PDQIDTWVRPMLEGRYFGT-------------MCLSEPQAGSSLADITTKAAPAPDGTYR 189

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLK 276
           ++G K ++S    +       ++LA+  G       +  F+VP+ L DG+ N +    L 
Sbjct: 190 ITGTKMWISGGDHELTENIVHLVLAKAPGGGPGVKGISLFIVPKFLPDGTRNDVALVGLN 249

Query: 277 NKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           +K+GNR      L F +          G+L+G+L+     + +M     +    ++ +  
Sbjct: 250 HKMGNRGTTNTLLNFGDGSFGDGTGAVGYLVGELHRGLFYMFNMMNEARIGVGFLATALG 309

Query: 329 RVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                +++ YA+ R                 +ID P + R +         A AL    A
Sbjct: 310 YAGFQKSLEYAKVRTQGRPVDAKGPDVPPVPIIDHPDVMRMMLAQKSYAEGALALGLYCA 369

Query: 378 NSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              DE ++  ++ A AR      ++ PI K W  +      + A++  GG GY  E  + 
Sbjct: 370 RLLDEEQTAPDDEARARAHLLLEVLTPIAKSWPSQWCLEANSLAIQVHGGYGYTTEFDVE 429

Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + YR++  N I  G+     LD+L   ++  G      L  T+ + +  +          
Sbjct: 430 QFYRDNRLNPIHEGAHGIHGLDLLGRKVVMDGGRGLAVLTETIGETIDRARSAGGDAAGY 489

Query: 490 SISLCKEDKGLARFLTE-------KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
           + +L  +   L              +ALA++ A L   G   +A ++L+     +     
Sbjct: 490 AEALAAQTARLGEVTAAVWAPGDPALALANATAYLEATGHIVVAWLWLDQFLAASGPDDF 549


>gi|332300789|ref|YP_004442710.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177852|gb|AEE13542.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
          Length = 576

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/491 (19%), Positives = 171/491 (34%), Gaps = 56/491 (11%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A+      + LE++GE          A   +   P LH          +V + P     L
Sbjct: 45  ADALDSYQRVLEVVGEVCG-EVIAPNAAEVDLTGPTLHE--------GRVSYDPLTAQNL 95

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                 GL      R +  +       I AA +   A     +L       A  +    +
Sbjct: 96  DTVRQTGLMGMALPRRYGGLNMPITPYIMAADMVSRADAGFENLW-GLQDCAETLYEFGS 154

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIY 226
               + + P++ + E               + + LTE   G+D+ A+  +     +D  +
Sbjct: 155 EDQRERFLPRVCAGE--------------TMSMDLTEPDAGSDLQAVMLKATYNEADQQW 200

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  S+  ++LA+ E G      +   + D    G+  +R++NK+G +   
Sbjct: 201 YLNGVKRFITNGDSNIHLVLARSEEGTKDARGLSMFIYDAKKGGVTVRRIENKMGIKGVP 260

Query: 286 TVELEFSNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           T EL F +    L G+  +     V  +     L     +V     +  EA  YA  RH 
Sbjct: 261 TCELVFKDAPAELCGERRLGLIRYVMSLMNGARLGIMAQAVGISEAAYREAKAYAADRHQ 320

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------------- 391
            G  +   P +   +A I     A  A  +  +   D  K+  + A              
Sbjct: 321 YGHAIDRFPAVYEMLALIRAKADATRAHLYETSRFVDMYKAYDDIARERKLTPEERKEQK 380

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A    PI K    ++A   + + ++  GGSGY+++ +  R YR+    +I  G+ 
Sbjct: 381 YYSRLADAYTPIGKGMSTELANQNVYDCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTT 440

Query: 448 NAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILRDSISLCKE--------- 496
              V+  +  +  GT     E+             KK++    +    C E         
Sbjct: 441 QLQVVAAIRHVTTGTYFARLEEYQQVAVSPEWQETKKLLASWIERAKACTELVTEAKDQT 500

Query: 497 -DKGLARFLTE 506
                AR L E
Sbjct: 501 LLDYHARRLVE 511


>gi|304409826|ref|ZP_07391446.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|307304182|ref|ZP_07583935.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
 gi|304352344|gb|EFM16742.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS183]
 gi|306913080|gb|EFN43503.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175]
          Length = 650

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 98/547 (17%), Positives = 202/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 61  PLRDYQF-----ILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSIGD 115

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    R+ + +G      D  +      +   I A  +     +
Sbjct: 116 LQGCKLVDGKVITPEGFDNAYRQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 175

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 176 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 222

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 223 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 282

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 283 FAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMF 342

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 343 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 402

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++ A        A +  P+ K +         
Sbjct: 403 LLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNAC 462

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 463 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 522

Query: 471 TLEQDL-----GSSGKKVITILRDSISLCKEDKG-LARFLT--EKIALASSAAALYRAGM 522
            + + +      ++ +  ++ L D     ++  G LA        I  A+S A L   G+
Sbjct: 523 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGV 582

Query: 523 NDIADVF 529
             +A ++
Sbjct: 583 TALAWMW 589


>gi|197105985|ref|YP_002131362.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196479405|gb|ACG78933.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 381

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 125/357 (35%), Gaps = 28/357 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPR 169
              GL+       +  +    A ++        A       +S ++   S  + +  T  
Sbjct: 43  REMGLYGLTIPEEYGGLGLSVAEEVEVVAELAWASAAFRSAVSMNLGVGSQGIVMDGTEA 102

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             ++W P++ +                     LTE   G+D A + ++  +  D      
Sbjct: 103 QKREWLPRLAAG--------------AVASFALTEPGSGSDSAGLVTRAVRDGDHYVLNG 148

Query: 230 GHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
             ++  ++P +D   ++A+   +       V   L      G+       K+G     + 
Sbjct: 149 SKRYITNAPTADLITVMARTHSDRLPKNAHVTAFLVPADTPGVTIGPKDRKMGQAGAWSA 208

Query: 288 ELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRH 343
           ++   +        L      G    MK+L    L+     V   R  L EA+ YAR R 
Sbjct: 209 DVYLQDVRVPAANVLGGVEGRGFATAMKVLDRGRLNVTAACVGQARRILHEALAYARERQ 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +++  +AD   ++ AA ++    A  +D  +  S E       A   K +
Sbjct: 269 QFGQAIAGFQLVQAMLADSQAELYAAESMLRDAARRYDAGQRISLE-------ASCCKMF 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +M   +   A++  GG+GY+ +  + R YR+     I  G+     L +   + +
Sbjct: 322 AAEMVGRIADRAVQIHGGAGYMRDTPVERFYRDVRLFRIYEGTTQIQQLVIAREMLR 378


>gi|324515461|gb|ADY46208.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum]
          Length = 303

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 108/293 (36%), Gaps = 20/293 (6%)

Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +   E        M      I    +TE   G+D+AAI ++ +K  D         W   
Sbjct: 12  LAGNEEQKKKYLGMLAAEPLIAAYCVTEPGAGSDVAAIKTKAEKKGDSYVINGPKAWITG 71

Query: 237 SPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
              +  F +LA+ E              + DG   G+   + +  +G R + T  + F +
Sbjct: 72  GGYAKWFFVLARTETDPKTPAGQAFTAFVVDGDTPGISRGKKELNMGQRCSDTRTITFED 131

Query: 294 TFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
               ++   NV   P    K+ +          A  +V     +L EA  YA  R   G 
Sbjct: 132 V---VVPKENVLGAPGAGFKVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGV 188

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     +   +AD+A+++  A  +++R A   D  +  S         A I K +    
Sbjct: 189 PISQHQGVSFLLADMAINLELARLVTYRAAVDVDNKERSS-------YYASIAKCFAADT 241

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A    A A++ +GG+G+  E  + +  R++    I  G+     + +   L +
Sbjct: 242 ANITAANAVQILGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRVVISRHLLQ 294


>gi|323475770|gb|ADX86376.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
 gi|323478477|gb|ADX83715.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 400

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +            A              +S      + + 
Sbjct: 49  KEVLEKAKEIGLYGVAVPEQYGGQGGDTLMTAIAQEEISRVWASLSTRVSVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K +               P+ +         TE   G+D+A I +  +KI +
Sbjct: 109 LFGNEEQKKKYV-------------TPVARGDKVAAFANTEPAAGSDVAGIQTIAKKI-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y ++G K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYVINGRKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G R++ T EL F +        L     G    M       +  A   V   + +L   +
Sbjct: 215 GLRASNTAELAFEDVEVPAENLLGEEGNGFKYAMATFDRTRVGVAAQGVGVAQAALERMV 274

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+ +R      LI   +++  IA+   ++  A  L++  A+ FD           A + 
Sbjct: 275 TYSTQRFAFQSPLIGFQMVQEKIAESLTEVNTARLLTYWAASLFDRGLENE-----AIVA 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K +   +A  V   A+   GG G      + R  R+     I  G+ +   L +L 
Sbjct: 330 ASMAKLYATDIAEKVAIRAITVHGGYGVATSTGVERLLRDVEVMRIYEGANDIQKLVILR 389


>gi|48478531|ref|YP_024237.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48431179|gb|AAT44044.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 537

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 109/513 (21%), Positives = 213/513 (41%), Gaps = 47/513 (9%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
           F  +   L  G+N ++ D  L +++    +     L  +G Y+ S   ++   + +Y  P
Sbjct: 3   FDFSNIFLSRGVNYFNDDKTLHSIMKYL-NYHDDALADMGLYISSEMIEDSMFIDHYAKP 61

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            L  +G      + V      ++++ R +  G+   I D+                   L
Sbjct: 62  VLKTWGILDNEIEGVWISRDHNSIIERLLDMGVVSRILDKD------------------L 103

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M    +G+L+S S    ++     T    K ++  +   ++    +              
Sbjct: 104 MFHFTSGYLISDSGLFCTLTLTGQTVYALKKYSNNL--NDFIEHYR----NDHWLGATYY 157

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-----GRVGCF 256
           TE +GG+D+ A  +      D       +K+F S + ++D  I+ A++        +  F
Sbjct: 158 TEIQGGSDLGANKTVAVSNGDSFILNGENKYFASDAGLADGAIVTARLNNKPGVKGISVF 217

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            VP L  DGSPN    +RLK+K+G     T E+  +N+ G++LG+ N       ++  + 
Sbjct: 218 FVPALKPDGSPN-YNIRRLKDKLGTILVPTGEVILNNSIGYMLGNDNNGIYIALEILEIS 276

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +D A+ +    R +L E+  Y+  RH  G  +I+ P++ R + ++  ++ A+T LSF  
Sbjct: 277 RIDDALAAAGIARKALWESYLYSLERHAFGKAIIEHPLIIRDLIEMQSEVDASTVLSFIA 336

Query: 377 ANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           A+ F    DE     ++   AR    + K      +  V   AME  GG G++ +  + +
Sbjct: 337 ADMFSKVTDEEPPYHDDYHMARAFTHMAKNISSWASDHVTRYAMEIFGGKGFLYDFPVEK 396

Query: 433 HYRESPANSILLGSGNAMVLDVL----------NLLEKGTNLFEQLFSTLEQDLGSSGKK 482
            +R+S   S+  G+ N   LD L           ++    ++ + L       L S+ ++
Sbjct: 397 FHRDSIVTSLWEGTSNIQALDFLEILIKKKIDKRIISIINDIIKDLSKENADILSSALRR 456

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAA 515
            +  L   +S  K  +  A+ +   +   S+ A
Sbjct: 457 SLENLESMLSSGKT-EYFAKDILNTLGHLSALA 488


>gi|327482516|gb|AEA85826.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 600

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 170/498 (34%), Gaps = 61/498 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   I  G H +        +             +  A +        S+ ++ 
Sbjct: 76  PEVKPAVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPMLSMGASH 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +               PM +      + LTE   G+ ++ I ++ + 
Sbjct: 136 LIETFGSEEQKRRFL-------------QPMLEGRFFGTMALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
             DG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F    N  G+L+G+ +     +  M     +   
Sbjct: 243 GERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
           + ++         +++YAR R       G         +I+   +KR +      +  A 
Sbjct: 303 MGAIMLGYAGYLYSLNYARERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A   D+       ++R   A    ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L   L++       QL   ++     + + 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLLGLIQDCCQRAAEY 482

Query: 482 ----KVITILRDSISLCK--EDKGLARFLTEK--IALASSAAALYRAGMNDIADVFLENR 533
                +   L   ++         L   +  K  +ALA+SA  L   G   I   +LE  
Sbjct: 483 DSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNLALANSALYLKVFGHAVIGWRWLEQA 542

Query: 534 FLDNCHSTHCMLHGRFNA 551
                           + 
Sbjct: 543 LRAERGLAEGN-PADADF 559


>gi|325954035|ref|YP_004237695.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323436653|gb|ADX67117.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 600

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/460 (17%), Positives = 156/460 (33%), Gaps = 47/460 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            L+R+    GL        +  +       +        A    A    + +      + 
Sbjct: 65  ELMRKIGELGLLGISIPEEYGGLGMGFVTTMLVCDYISGATGSLATAFGAHTGIGTMPIL 124

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ + E+                  LTE   G+D  +  ++     D
Sbjct: 125 LYGTEEQKQKYLPKLATGEWF-------------SSYCLTEPEAGSDANSGKTKAVLSED 171

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G          W  ++  +D FI+ A+++    +  F+V +   D +  G      ++K+
Sbjct: 172 GKEYIITGQKMWITNAGFADIFIVFARIDDDKNITAFIVEK---DKAGEGFSLGEEEDKL 228

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  S++T ++ F+        LLG+ N       +   +  +      +   R  L  ++
Sbjct: 229 GIVSSSTRQVFFNEVRVPVENLLGERNGGFKIAMNALNVGRIKLGAACLDAQRRVLNNSL 288

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R      +     ++  +AD+A+    + A ++R A    +A   +         
Sbjct: 289 QYASERKQFNVSINTFGAIQEKLADMAVATFTSEAGAYRAAKDIQDAIEDNIAKGMPHNE 348

Query: 397 A------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           A             I K W  + A     E ++  GG GY +E  +   +R++  + I  
Sbjct: 349 AELKGIEEYAIEASILKVWISEAAQKASDEGIQIYGGMGYSKEMPMEAAWRDARISRIYE 408

Query: 445 GSGNAMVLDVLNLLEK----GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE---D 497
           G+     L  +++L K    G          +  +L S     I    +  +  KE   +
Sbjct: 409 GTNEINSLLCISMLVKRAFQGRIDLMTPAMDVANELMSIPSFDIPDYTELFAQEKEIIIN 468

Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
              A F+    AL    A L +     +A     +R +  
Sbjct: 469 LKKAFFMVAGAALQKFGADLEKHQQLILA----ASRIMQE 504


>gi|88703603|ref|ZP_01101319.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88702317|gb|EAQ99420.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 391

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 148/380 (38%), Gaps = 30/380 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH--LM 152
           ++V F  A+   L   I    H   W  +   +V ++A +    R +LM   +  +  + 
Sbjct: 9   EQVMFRDAYRKFLSTEIVP--HMEAWREA--GIVDREAFRKAGERGFLMVWPDEKYGGMG 64

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSR------------EYDPTNKAPMQKTSVAIGL 200
            P      ++   T      DW   + SR            E             + + +
Sbjct: 65  DPDFRFEQVIIEETAYARVGDWYSTLHSRLVGPYFTRFGNEEQCQRFMPKCASGELILAI 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+A + S   +  D  + L+G K ++S+ + +D  I+ A+ +       + 
Sbjct: 125 AMTEPDAGSDLAGMRSTAVEHDDH-WVLNGSKTYISNGINADVVIVAAKTDPENNPHAMT 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316
             + +    G    R   K+G ++  T EL F++       +LG+ +     + +     
Sbjct: 184 LFIVERGMEGFERGRNLEKMGMKAQDTAELFFNDVLVPKANVLGEPHKGFIYLMEGLAEE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A   ++  ++S      Y + R   G  L      +  +A++  D+  A     + 
Sbjct: 244 RLIGACGYLAAAQLSWDLTCEYVKERKAFGKPLAAFQNTQFKLAELRTDLDIAQNYVDQC 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +F++    + +AA A+++         ++   V    ++  GG+GY++E  I+R + +
Sbjct: 304 VAAFNDGALTAVDAAKAKLVT-------SELQVKVADIGVQLHGGAGYMDEYPISRQFTD 356

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +   +I  GS   M + V  
Sbjct: 357 AKIATIYAGSSEVMKIIVSR 376


>gi|152989582|ref|YP_001349546.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150964740|gb|ABR86765.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Pseudomonas
           aeruginosa PA7]
          Length = 379

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 125/358 (34%), Gaps = 27/358 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMVALM 165
             ++   G      D  +     K     +     L    E G ++   S      +A  
Sbjct: 43  WAKAGEMGFLLPWADEEYGGAGLKDFRYEQIMCEELARINEPGFMIPLHSALCGPYIAEY 102

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                     P I   E               + + +TE   G+D+A + S      D  
Sbjct: 103 GNAEQKARLLPGIIRGE-------------TILAVAMTEPAAGSDLAGMRSTAVDKGDH- 148

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + L+G K F+S+ + +D  I+ A+ +      +    L +    G    R   K+G +S 
Sbjct: 149 WLLNGSKVFISNGLLADVVIVAAKTDPANRHAM-GLFLVERGMEGFERGRNLKKLGMKSQ 207

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F+N        L  + G    +  +     L +A  +V+G   +L   I Y + 
Sbjct: 208 DTAELFFNNVRVPKENLLGDAKGGFFYLMNMLAQERLTNACGAVAGAEAALQATIDYVKE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +A++   I  A   + R     ++ K   E       +A   K
Sbjct: 268 RQAFGRPVAHFQNTRFKLAEMRTQIDVAQVFTDRCVMDHNQKKLTPE-------VAAEAK 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            +  ++   V+ E ++  GG GY+ E  I R Y  +    I  G+   M   +   ++
Sbjct: 321 LFTTELLGRVVDEGVQLHGGWGYMWEYPICRMYANARIQRIFAGTSEIMKEIISRGMK 378


>gi|108797080|ref|YP_637277.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866165|ref|YP_936117.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126432702|ref|YP_001068393.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108767499|gb|ABG06221.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692254|gb|ABL89327.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126232502|gb|ABN95902.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 380

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 132/399 (33%), Gaps = 29/399 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + S  A+EL  +      ++    P  +  +K E +P    +  +    GL       
Sbjct: 5   RLLPSDEARELIALTRDIADKV--LDPIVDEHEKTETYPEG--VFAQLGAAGLLSLPQPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S+  +    T    + W P + S  
Sbjct: 61  EWGGGGQPYEVYLQVLEEIAARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       S      L+E + G+D AA+                  W      +D 
Sbjct: 120 ------------SQIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWITHGGRADF 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLL 299
           + + A+     G   +   L  G   GL + + + K+G  +  T    +          +
Sbjct: 168 YTLFART--GEGSRGISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++V   + +L EA  YA  R   G  +ID   +   +
Sbjct: 226 GAEGQGLQIAFSALDSGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + +A A     A   D     S +A+ A+++A          A  V  +A++ +
Sbjct: 286 ADMAAAVVSARATYLDAARRRDLGLPYSTQASVAKLIA-------TDAAMKVTTDAVQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  +  + R+ RE+    I  G+     L +   L
Sbjct: 339 GGVGYTRDFRVERYMREAKITQIFEGTNQIQRLVISRSL 377


>gi|63100739|gb|AAH95385.1| Im:7141484 protein [Danio rerio]
          Length = 469

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 135/375 (36%), Gaps = 35/375 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + D+    P     L      GL        +  +        R   +  +    A  L 
Sbjct: 96  KIDREANIP--PETLDGLKELGLFGIQIPEEYGGLGLSNTMYARLGEITSLDGSIAVTLA 153

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        + +  T      + PK+ + E+                  LTE   G+D A
Sbjct: 154 AHQAIGLKGILIAGTDAQKAKYLPKLATGEH-------------IAAFCLTEPGSGSDAA 200

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGS 266
           +I  +     DG  Y L+G K W  +   +D   + A+ E           +   + + +
Sbjct: 201 SIQLRATLTEDGKHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKKDKITAFIVERA 260

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+   + ++K+G R + T E+ F +T   +    NV     +  K+ +  L++   S+
Sbjct: 261 FGGVTSGKPEDKLGIRGSNTTEITFEDTKVPI---ENVIGEVGDGFKVAMNILNNGRFSM 317

Query: 326 SGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            G         +  +  YA  R      L +  +++   A +AL++    ++++  A   
Sbjct: 318 GGAGAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATMALNVYVMESMAYLTAGMM 377

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    + +     A + K +  +     ++EA++ +GG G+ +     R+ R+    
Sbjct: 378 D--RPGLPDCSL---EAAMVKVFSSEGTWICVSEALQVLGGLGFTKNYPYERYLRDCRIL 432

Query: 441 SILLGSGNAMVLDVL 455
            I  G+   + + V 
Sbjct: 433 QIFEGTNEILRMYVA 447


>gi|149926059|ref|ZP_01914322.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149825347|gb|EDM84558.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 387

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/396 (20%), Positives = 151/396 (38%), Gaps = 24/396 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +EL R         +   P    W+K +  PA H L ++  + GL        F 
Sbjct: 3   LSQEHKELQRTIERFVE--NEINPHVATWEKEQMFPA-HELFKKMGNLGLLGLTKPEEFG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +    ++ + AA+      L   H       +  +   M TP + +       S E   
Sbjct: 60  GMGLDYSYSVVAAQA-----LGKIH-CGGVPMAIGVQTDMATPALARFG-----SDELRR 108

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
              AP     +   +G++E   G+D+A + +  +K            W  +S  +D   +
Sbjct: 109 EFLAPAIAGDMVACIGVSEPGAGSDVAGVKTTAKKDGSDYIINGSKMWITNSLQADWICL 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV- 304
           LA             ++      G+  ++  +KIG  ++ T  + F N        + + 
Sbjct: 169 LANTSEGKPHQNKSLIIVPMKTPGITIEKKIHKIGMWASDTGLIHFDNVRVPQRNLIGME 228

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G +  M       L  A  S+ GM   L E I+Y R+R++ G  ++DQ V+   +A++
Sbjct: 229 GAGFMYQMIQFQEERLWGAANSIEGMMHVLNETINYTRQRNLFGSTVLDQQVVHFTLAEL 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +I A  AL ++    +      +E       +A + K    ++   V  + ++  GG 
Sbjct: 289 KTEIEALRALVWQATEEYVAGGEVTE-------LASMCKLKSGRLVREVADKCLQFWGGM 341

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+  E   ++ YR+    SI  G+   M+  +   +
Sbjct: 342 GFTWENPASQLYRDGRLISIGGGADEVMLGIICKFM 377


>gi|312197996|ref|YP_004018057.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311229332|gb|ADP82187.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 391

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 134/363 (36%), Gaps = 30/363 (8%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA----LM 165
           +   GL        +     +  ++ R   +  +A++ A    + +     +V      +
Sbjct: 46  AGAQGLLGIAAPAEYGG-AGEDDYRYRLVLVEELARVGAASFNAGTSAQDDLVVPYLRDL 104

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      W P++ + E                 L +TE   G+D+  I +   +  +G 
Sbjct: 105 GTAEQQAAWLPRLCTGE-------------AIGALAMTEPGAGSDLQGIRTSAVRDGEG- 150

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + LSG K F+++ + +D  I+ A+ +   G       L + + +G    R   K+G R N
Sbjct: 151 WRLSGSKTFITNGILADVVIVFARTDPEAGSRGYSLFLVESAADGFRRGRKLEKLGLRGN 210

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +       LLG        + +   L  L     S +  R +    + Y   
Sbjct: 211 DTAELFFDDIVLPSTALLGTEGRGLAHLMERLPLERLSIGATSYAFARAAYDWTVEYCFG 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + D    +  +A+IA ++  A A   R   +  +    + +AA A+       
Sbjct: 271 RRAFGQPIGDFQNTRFTLAEIATELDVAQAYHDRAVLALGDGSLTAVDAAKAKW------ 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            W   +   V+   ++  GG G++ E  I R Y ++    I  G+   M   +   + K 
Sbjct: 325 -WLTDLQNRVVDRCVQLHGGYGFMWEYPITRAYADARIQPIFGGTNEIMKEIIGRDIAKR 383

Query: 462 TNL 464
            N 
Sbjct: 384 ANA 386


>gi|297190904|ref|ZP_06908302.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722698|gb|EDY66606.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 401

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 121/362 (33%), Gaps = 35/362 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  ELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINTHFIVAYMLKQHGTQEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + P++   E             V     ++E   G+D++AITS+G K  D        
Sbjct: 112 DTFLPRMALGE-------------VRGAFSMSEPGLGSDVSAITSKGVKDGDEYVLNGQK 158

Query: 232 KWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP------NGLCYQRLKNKIG 280
            W  +   S    +L + +     G      +   L +  P       GL      +K+G
Sbjct: 159 MWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEPGFGEVRPGLTIPGKIDKMG 218

Query: 281 NRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +   T EL            L G        + D   +  ++ A       + +    +
Sbjct: 219 YKGVDTTELIMDGLRIPANRVLGGTTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGV 278

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++RH  G  +     ++  +A++A  + AA A+    A   D  +    EA  A+ +
Sbjct: 279 SYAQQRHTFGKQIAQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMAKYL 338

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        +    V+ +A    GG G+ +E  I R YRE+P   I  G+     + +  
Sbjct: 339 A-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPMLLIGEGTAEIQKMIIGR 391

Query: 457 LL 458
            L
Sbjct: 392 RL 393


>gi|291230593|ref|XP_002735248.1| PREDICTED: long-chain acyl-CoA dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 422

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 124/376 (32%), Gaps = 35/376 (9%)

Query: 95  DKVE-FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           D+V  +H  W         +  ++   GL       +   +       +           
Sbjct: 62  DEVAPYHEQWEKDGQVSREVWEKAGKQGLLGVNISENDLGIGGDFLSAMIVMEEQAYVNA 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S      +A   +    +   P + S E                 + +TE  
Sbjct: 122 SGVGFGLHSDIVMPYIANNGSREQIERLIPGLASGE-------------KIGAIAMTEPG 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLE 263
            G+D+  I +  ++     + L+G K F+++  M+D  I++A    + +     +   L 
Sbjct: 169 AGSDLQGIRTYAKQDGSD-WILNGSKVFITNGYMADLVIVVAVTKPDAKSPAHGITLFLV 227

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDS 320
           +    G    +   K+G ++  T EL F +        L  +      +        L  
Sbjct: 228 EEGMEGFKKGKKLQKMGLKAQDTAELFFEDVRLPASAVLGQANKGFYMLMNELPRERLLI 287

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           ++M  +       E   Y R+R   G  L     ++  +A++  +I    A +     SF
Sbjct: 288 SVMGQAACEFMFEETRSYVRQRKAFGKTLSHLQTIQHKLAELKTEICVGRAFTDSCLQSF 347

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +E +            A + KYW   +   V  + ++  GG GY+ E  I + Y ++   
Sbjct: 348 NEKR-------LDSFTASMAKYWTSDLQNKVAYQCVQMHGGWGYMMEYPICKAYLDARVQ 400

Query: 441 SILLGSGNAMVLDVLN 456
            I  GS   M   +  
Sbjct: 401 PIYGGSNEIMKELIAR 416


>gi|238059069|ref|ZP_04603778.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237880880|gb|EEP69708.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 381

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 149/397 (37%), Gaps = 29/397 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S  A++L  +A     +  A    G    + EF      +LR     GL    +      
Sbjct: 9   SDEARDLLDLATELADRELAPRAAGFE-SRAEFP---REVLRTLGRAGLLGLPYAEEHGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +     ++   +     L     +S    S   +A   T    K   P +   E    
Sbjct: 65  AAQPYEVYLQVLEILASRWLVVAEAVSVHTLSCYPLAQFGTDAQRK-LLPDLLGGE---- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                    +     L+E +GG+D AA+T++  +  +         W   + ++D + + 
Sbjct: 120 ---------LLGAYCLSEPQGGSDAAALTTRAVRDGEAYVVTGTKAWITHARVADFYNIF 170

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
            +  G  G   +  LL D    G+  Q  +  +G  ++   ++ F +       L+G   
Sbjct: 171 CRT-GGPGPKGISCLLADRDTPGIVPQAAERMMGLHASPVAQIAFDDARVPADRLIGGEG 229

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         L  A  +V   + +L  A+ YAR+R   G  ++D   +   +AD A
Sbjct: 230 AGFTIAMSALDSGRLGIAACAVGLAQAALDHAVGYARQRQQFGRAIVDFQGLGFLLADAA 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             ++AA AL+   A   D  +  S EAA A       K +   +A  V  +A++ +GG+G
Sbjct: 290 TQVSAARALTLHAARLRDAGRPYSTEAAKA-------KLFATDVAMRVTTDAVQVLGGAG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y+ +  + R+ RE+    I+ G+     L +   L +
Sbjct: 343 YVADHPVERYLREAKVLQIVEGTNQIQRLVISRALAR 379


>gi|327450343|gb|EGE96997.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA2]
          Length = 382

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 28/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D               +  G         +                       +
Sbjct: 26  PNAAEVDDKGVFA--QQQYDALVEAGFAAPGIPEQYGGDGADAIASAIIMEEVARVCASS 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++S +      +    +    K +  ++ S                  G  L+E   G
Sbjct: 84  STVISSNELGTVPLLKYGSEEQRKRYLSEVASG-------------KALFGYALSEADAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+  +  +  D         W   +  +   ++ A  +       +  L+      
Sbjct: 131 SDPAALKCRADEDGDSFVLNGVKAWVTEAGEAKYLVIFAVTDLDDPRHRISALMVHADDP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++ +S++  
Sbjct: 191 GISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNSRVSIAAQ 248

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+     A  Y ++R   G  L +   ++  +AD+A+ + AA AL++  A   D +
Sbjct: 249 AVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSAA---DRS 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R++    I 
Sbjct: 306 GRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRDAKVTQIY 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTNQIQRIVIARQL 377


>gi|167924100|ref|ZP_02511191.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 390

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAG-------------RRISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        +     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALIMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|157961676|ref|YP_001501710.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846676|gb|ABV87175.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 596

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 90/497 (18%), Positives = 183/497 (36%), Gaps = 58/497 (11%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV     +    ++ + +G      D  +      +   I A  +     +        +
Sbjct: 71  KVITPQGFIDAYQQYVDNGWATLTCDPEYGGQGLPEVVGIFATEMKTATNMAFAMYPGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             + + +    +  +   +  K+ S E+  T             + LTE   GTD+A + 
Sbjct: 131 HGAYAAIHAHGSEALKAKYLDKLVSGEWTGT-------------MNLTESHAGTDLALLR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++     DG Y ++G K F+SS   D     A ++LA++         +  F+VP++L +
Sbjct: 178 TKAIPTGDGNYSITGEKIFISSGDHDLTDNIAHLVLARLPDAPEGVKGISLFVVPKILIN 237

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N L    L++K+G   N+T  + F    G L+G+ +     +  M     L 
Sbjct: 238 DDGSLGESNSLYAASLEHKMGIHGNSTCVMNFDAAIGELVGEAHQGLRAMFTMMNQARLG 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIA 367
             +  +    ++   A+ YA+ R              +   ++    ++R +        
Sbjct: 298 VGVQGLGVSEIAYQNAVAYAKDRIQGRALSGVKQPEQAADSILVHGDVRRMLLSQKAFNQ 357

Query: 368 AATALSFRLANSFDEAKSR------SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL  + A   D+A+           +  A +  PI K +          +A +  GG
Sbjct: 358 GTRALMGQQALWLDQAQRDCSPEQAKAASKLAALFTPIVKGFVTDQGFKACVDAQQVFGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE---QLFSTLEQD 475
            GYI E  + +  R+S    I  G+     LD++    L +KG  L     Q+   ++ +
Sbjct: 418 HGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKGATLQAWSGQVKQLIQSN 477

Query: 476 LGS-SGKKVITILRDSISLCKEDKG-LARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           + + + K  +  L D+    ++  G +A   ++   L  +A+  Y   +   A  ++  R
Sbjct: 478 IANEAMKPYLDGLMDAAGDLEKATGYIATNASKNPDLIGAASMPYMQILGITALAWMWTR 537

Query: 534 FLDNCHSTHCMLHGRFN 550
              +  +    L    +
Sbjct: 538 ---SAETALAALANGSD 551


>gi|72384108|ref|YP_293462.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72123451|gb|AAZ65605.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 378

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 129/379 (34%), Gaps = 36/379 (9%)

Query: 95  DKVEFHPAWHALLRR-------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           D + + P +H                G +       F      +     A     +A++ 
Sbjct: 22  DLLRYEPHFHETNEVHADVDTTLREMGYYGLSIPEEFGGTPVDK--VTLALVQMELARMP 79

Query: 148 AGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                S       +  L     T     +W P+I +               V     LTE
Sbjct: 80  PQFWPSIRNALGPIPQLLLLHGTSAQKDEWLPRIAAG--------------VTACFALTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+DI A+ +   K  +         +  ++   D F++ A+ +   G   V   L +
Sbjct: 126 PDAGSDIGAMRTTAVKSGNQWVLNGAKTYISNAERGDVFLVFAKTDKNKGRDGVSAFLVE 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               G         +G  +N    L F N       LLG+ N              ++  
Sbjct: 186 PKTAGFSMSAPIRTMGFMTNGVYGLTFDNCKIPADNLLGEENRGFYYAVSGLNEARVNVG 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++ G +++   A+ Y++ R   G  L    V++  +AD+A++  AA  L    A    
Sbjct: 246 CQALGGSQIAFEHALQYSKDRVTFGQPLSTHQVLQHMLADMAMEQHAARMLLLEAAWGLQ 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  +++YA       K +C ++A  +  +A++  GG+GYI+   + R YRE     
Sbjct: 306 TGVDVRLKSSYA-------KVFCTEVANRIADKALQIFGGAGYIKGMVVERVYRELRVMR 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+       +   L +
Sbjct: 359 IFEGANEIQRNMIAKQLLR 377


>gi|111020937|ref|YP_703909.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820467|gb|ABG95751.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 383

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 135/380 (35%), Gaps = 36/380 (9%)

Query: 89  PGGERWDKVEF--HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  ERW+        AW A    +   G+        F        ++ R      +A+ 
Sbjct: 27  PNYERWESERLIDRSAWLA----AGKSGIVGLGVPEEFGGSGVTD-YRFRYVVAEEIART 81

Query: 147 EAGHLMSP----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                 S        +   +  + T    + W P + + E             +   + +
Sbjct: 82  ATTSFGSGLSLQDDIAIPYIVNLGTEEQKQRWLPGMAAGE-------------LIGAIAM 128

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D+  + +   +     + ++G K F+++ +  D  I++A+ +   G      L
Sbjct: 129 TEPGAGSDLQGVKTTAVRDG-VEWVINGQKTFITNGIHSDLVIVVARTDPSAGSKGFSLL 187

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G    R  +K+G     T EL F +       LLG        + +   L  +
Sbjct: 188 VVERGMPGFSRGRKLHKVGLAGQDTAELVFEDVRVPASNLLGTEGRGFVHLMENLPLERI 247

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A+ +++  + +      Y   R   G  + D    + A+A++  +I    +   R   
Sbjct: 248 SIAVNAIAAAKAAYQWTRDYVFERKAFGKPIGDLQNTRFALAEMLTEIEVTESHIDRCVL 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + +  +  + +       A   K+W  ++   V+   ++  GG GY+ E  I R Y +S 
Sbjct: 308 ALNADELTAVD-------ASKGKWWASELQKRVVDRCVQLHGGYGYMMEYPIGRAYVDSR 360

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             +I  G+   M   +   +
Sbjct: 361 IQTIYGGTTEIMKEIIGRDI 380


>gi|262204023|ref|YP_003275231.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087370|gb|ACY23338.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 383

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 139/378 (36%), Gaps = 28/378 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             +VE   A+ A  + +    G++       +           R  +      +     M
Sbjct: 27  VQQVEHDNAYPATWIEQMKQIGIYGLAVPEEYGGSPVSMPCYARVTQELARGWMSLAGAM 86

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A ++ L  T    + + P++ + E   T             + LTE  GG+D+ 
Sbjct: 87  GGHTVVAKLLTLFGTEEQKQTYLPRLATGEMRAT-------------MALTEPGGGSDLQ 133

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGL 270
           ++T+  ++  D +       W  ++  S    +L + + +       +  +L +  P GL
Sbjct: 134 SMTTLAREEGDDLVISGSKTWISNARRSGLIALLCKTDPKAQPRHRGISIVLCEHGP-GL 192

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILI--YLDSAIMSVS 326
              R   K+G +   + EL F          L      G  + MK L    +  A  ++ 
Sbjct: 193 TVSRDLPKLGYKGVESCELSFDGYRVPRSAILGSVAGKGFSQMMKGLETGRIQVACRALG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +L +++ YA++R   G  +     +   +AD+A  + AA  L++  A  +D  +  
Sbjct: 253 VATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDRGRRC 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A       K +  ++A  +   A+   GG GY  E  I R++R++P   +  G+
Sbjct: 313 DMEAGMA-------KLYASEVAMEIALNAVRIHGGYGYSTEFDIERYFRDAPLMIVGEGT 365

Query: 447 GNAMVLDVLNLLEKGTNL 464
                  +   L     L
Sbjct: 366 NEIQRNVIAAQLVARGGL 383


>gi|86740944|ref|YP_481344.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567806|gb|ABD11615.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 383

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 137/380 (36%), Gaps = 35/380 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           PG  R D+ +  P  + ++ +    GL    +   +        A  +    L  +    
Sbjct: 27  PGAARHDEEKTFP--YEVVAQMADMGLFGLPFPAEYGGQGADFFALCLAIEELARVDSAV 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  +    TP   ++W P + S                    GLTE   
Sbjct: 85  AITLEAGVGLGAMPIYRFGTPAQREEWLPSLASG-------------RALAAFGLTEPDA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGR--VGCFLVPRLLE 263
           G+D     +  +    G + ++G K F+++  +D    + +  V GR   G   +  +L 
Sbjct: 132 GSDAGGTRTTARLDG-GDWIINGSKAFITNSGTDITRLVTVTAVTGRTPAGHKEISSVLV 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
                G       +K+G  ++ T  L F +        L        +   L  LD   +
Sbjct: 191 PVPTPGFTAGPAYSKVGWHASDTHPLTFDDVRVPAENLLGARGRGFANF--LQILDEGRI 248

Query: 324 SVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S + V LA+A       YA++R   G  +     +   IA++      A A  +  A+
Sbjct: 249 AISALAVGLAQACVDESVKYAKQREAFGAPIGRNQAIAFKIAEMEARTYVARAAYYDAAS 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                    +EAA A       K +  + A     EA +  GG G++ E  +ARH+R++ 
Sbjct: 309 RMLAGLPVKKEAAMA-------KLFSSEAAVTNAREATQIHGGYGFMNEYPVARHWRDAK 361

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 362 ILEIGEGTSEVQKMLIAREL 381


>gi|326389065|ref|ZP_08210647.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206665|gb|EGD57500.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 388

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 26/354 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        F  +    +   +    L   A        +        +A+  TP 
Sbjct: 45  RALGLFGLTAPEEFGGLGLTMEEEVLAIFELGRAAPAFRSMFATNVGIGMQGIAIDGTPE 104

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               + P++ S               +     LTE   G+D  ++ +  ++  D      
Sbjct: 105 QKAKYLPRLASG-------------DLIGSFALTEPEVGSDAGSVRTTARRDGDDYVING 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P +  F ++A+ +  + G   V     +    GL   + + K+G +     +
Sbjct: 152 TKRFITNAPHAGLFTVMARTDPAQKGAAGVSAFAVERGTPGLSLGKPEKKMGQQGAHVCD 211

Query: 289 LEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F +        +      G    MK+L    L  A   V      + + + YA  R  
Sbjct: 212 VIFEDCRVPATALIGGVEGQGFKTAMKVLDKGRLHIAAACVGLSDRIIEDMVAYAVGRRQ 271

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L D  +++   AD   +  AA  +    A   D  ++ S E       A   K + 
Sbjct: 272 FGRPLADFQLLQAFFADSKAEAYAARCMVIDAARKRDAGQNVSVE-------ASCAKMFA 324

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    +    ++  GG GYI E    + +R++    I  G+     + +   L
Sbjct: 325 SEAVGRIADRNVQVHGGMGYIREYRAEQLFRDARLFRIYEGTTQIQQIIIAKAL 378


>gi|119475210|ref|ZP_01615563.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451413|gb|EAW32646.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 388

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 126/401 (31%), Gaps = 29/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q     A     +  A  P    WD+ +          ++   G        
Sbjct: 2   DFTLNEDQQAFQDTARAFAREQMA--PYAADWDENKIFS--KEFYAKAGELGFCGLYTPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +                    +S    +  M+A        + W   +    
Sbjct: 58  HAGGMNLTRLDSAIVLEELAAGCTSTAAFISIHNMATWMIAQWGKESTIEQWCGDLTQG- 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                              LTE   G+D  ++ S  +K     Y L+G K F+S    +D
Sbjct: 117 ------------KKLASYCLTESGAGSDAGSLRSTAKKQG-QQYLLNGSKMFISGAGDTD 163

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297
             +++A+      G   +         +G+ Y + + K+G  S  T  + F N       
Sbjct: 164 VLVVMARTGTQEEGSAGISAFAIPAQLDGIHYGKNEAKMGWNSQPTRAISFENVLVDQDS 223

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG                 ++ A  S+   +  +  +  Y   R   G  L     ++ 
Sbjct: 224 LLGQEGEGFKIAMRGLDGGRINIATCSIGAAQACINHSQKYMLERQQFGKPLAAFQALQF 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  ++ AA  +    A+  D                 + K +       +  +AM+
Sbjct: 284 KLADMLTELIAARQMVRLAASKLDADDVDK------STYCAMAKRFATDAGFNICNDAMQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY++E  + R  R++  + IL G+   M +     L
Sbjct: 338 LHGGYGYLKEYPLERFMRDARVHQILEGTNEIMRVITARRL 378


>gi|120403429|ref|YP_953258.1| long-chain-acyl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119956247|gb|ABM13252.1| Long-chain-acyl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 391

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 132/372 (35%), Gaps = 33/372 (8%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGH 150
            H  W         +   +   G         +    V    +           +     
Sbjct: 39  HHEEWEKNKLVDRDVWLEAGKQGFLGMAVPEEYGGGGVDDFRYNTIVTEEVTAGRYTGLG 98

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +A  +  + T    + W PK  S E             +   + +TE   G+D
Sbjct: 99  FSLHNDVAAPYLIRLATEEQKQRWLPKFCSGE-------------IISAIAMTEPGTGSD 145

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  I ++  +  D  Y L+G K F+++ +  D  I++AQ +   G      L+ +    G
Sbjct: 146 LQGIKTRAVRDGDH-YVLNGAKTFITNGIHSDLVIVVAQTDPDKGALGFSLLVVERGMAG 204

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
               R  +KIG  +  T EL F++    +   L     G +  M+ L    +  AIM+ +
Sbjct: 205 FERGRKLDKIGLDAQDTAELSFTDVKVPVENLLGEEGQGFIYLMQNLPQERISIAIMAAA 264

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            M   L   + Y + R   G  +  Q   +  +A+++ +      +         + K  
Sbjct: 265 AMEAVLDVTLQYTKERKAFGRPIGSQQNSRFLLAELSTEATVVRMMVDEFIKLHLQDKLT 324

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+AA A+        +  +    +I   ++  GG GY+ E  +AR Y ++   +I  G+
Sbjct: 325 VEQAAMAKW-------YSTEKQVHLIDRCLQLHGGYGYMREYDVARAYLDARVQTIYGGT 377

Query: 447 GNAMVLDVLNLL 458
              M   +   L
Sbjct: 378 TEIMKEIIGRSL 389


>gi|24216816|ref|NP_714297.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24198183|gb|AAN51315.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 534

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 29/367 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D    +  W  +       GL        +            A   +    L++G  
Sbjct: 34  RDEDCTWDNELWKEMGSI----GLLGIPIPEEYGGQGGNCFQCCLAQEAFNAGSLDSGFG 89

Query: 152 MS---PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +S     +  +  +    T      + PK+ + E+               GLGLTE   G
Sbjct: 90  LSWGAHMIIGSLPILFQGTEIQKNKYLPKLVNGEW-------------IAGLGLTEPDSG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A + +  +K  DG        +  + P+   FI++A+     G   +   + +    
Sbjct: 137 SDAAGMRTYAEKTKDGFVLNGSKTFITNGPIGQVFIIMARTTKSRGPMGISAFIVESKNK 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSV- 325
           G    ++  K+G+ ++ T EL F + +      L              L +  + +++  
Sbjct: 197 GFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLHSGFLRIGKATLEWERTVLLAAL 256

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             GM   L   I Y+ +R   G  +++   +K  IA I + + AA  +++ +A   D   
Sbjct: 257 MGGMENILENCIRYSWQRQQFGKSVLNFFAIKEKIARIWVYLCAARRMTYFVARKKDFEP 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + S       + + I K +  +++  V ++A++  GG GY+ E S++R YR+    +I  
Sbjct: 317 NVS-----LPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVSRFYRDVKLGTIGG 371

Query: 445 GSGNAMV 451
           G+     
Sbjct: 372 GTSEIQR 378


>gi|77404554|ref|YP_345130.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|77019935|dbj|BAE46310.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 386

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 130/377 (34%), Gaps = 33/377 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                +      H        ++   GL C      +        H+    +    A   
Sbjct: 37  DRWAAQ------HQVDREFWTKAGAAGLLCLDIAEEYGGGGGNFGHEAIVQQEIAYAHDT 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A      S   A  +A   T    K W  K  S E               + + +TE   
Sbjct: 91  AFGFAVHSTIVAHYIAAYATEDQKKRWLSKCASGE-------------SVLAIAMTEPGT 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDG 265
           G+D+ A+ +   +   G Y ++G K F+S+    D  +++A+ +   G   +  L+ E  
Sbjct: 138 GSDLQAVRTTAVRDG-GHYVINGSKTFISNASHCDLLVIVAKTDPSQGSKGISLLVAETE 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSA 321
           +  G    R+ +KIG     T EL F++        L G        +        L   
Sbjct: 197 NLPGFERGRVLDKIGQHGQDTRELSFTDMRVPAANLLGGVEGQGFYQLMGQLQRERLILG 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  V+    ++AE+I YA+ RH  G  +++    K  +A+   D+ A   L        D
Sbjct: 257 VGGVAVAEAAVAESIRYAKERHAFGKPILNFQNTKFVLAECKTDVLAGKTL-------MD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R  +       A + K W       ++   ++  GG GY+ E  IA+ Y  S    
Sbjct: 310 HCIQRHLDGTLDAATASMAKLWGSDKQCEIVDRCLQVFGGYGYMMEYPIAQMYAASRVQK 369

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 370 IYGGTNEIMKELIGRAL 386


>gi|219847668|ref|YP_002462101.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541927|gb|ACL23665.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 417

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 142/386 (36%), Gaps = 33/386 (8%)

Query: 76  MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AH 133
            A     P +  +   G + +  E  P    +L+R    G       + +        A 
Sbjct: 25  FAEREVAPYIREWDRSGAKAEGPEDRPHLRPILKRMGELGFLGICIPQRYGGAGMDYLAL 84

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L  +       +   +  ++  +    T    + +               P  +
Sbjct: 85  AVVCEELERVDSFLRVVMSVHTGLNSLSLLQWGTEEQKQRFL-------------VPQAR 131

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR 252
                   LTE   GTD AA+ +  ++  D +Y L+G K ++S + ++D F++ A+ +  
Sbjct: 132 GEKLAAYCLTEPNSGTDAAAMQATARRDGD-VYILNGEKIWISLADLADNFLVFAKTDPA 190

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   + + +  G+    +  K+G R+  T  + F +    L   L       E  
Sbjct: 191 AGPRGITAFIVERTMPGVSSYPIHGKLGVRAGNTGGVVFQDVRVPLSHRLG---EEGEGF 247

Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           KI +  LD+   +V+     L +A     I YAR R   G  + +  ++KR I+ +   +
Sbjct: 248 KIAMAALDNGRYTVAAGATGLIQASLEASIRYARERQTFGVPIGEHQLVKRMISHMVRKL 307

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +  L +R     ++    + E   A+  A ++ +           +A++  G  GY +
Sbjct: 308 DTSRLLVYRAGWMKNKGIRNTRETTLAKWHATVSSF-------EAADDALQIHGAYGYAD 360

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           E  + R+ R +    I  G+     L
Sbjct: 361 EYPVERYLRNARGAIIYEGTRELQEL 386


>gi|86158089|ref|YP_464874.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774600|gb|ABC81437.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 387

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 143/380 (37%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D++   PA   L+R     GL       ++            A      A    
Sbjct: 26  PAAAENDRLRRFPA--DLIRGLGELGLLAVNVPSAYGGSEAGAVAYALALMEIAAADCAT 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M+ +     +VA   T    +   P++ + E             +A    L+E + G
Sbjct: 84  AVTMAVTNMVGELVARFGTEEQKRRHLPRLAAAEV------------LAGAFALSEPQAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGS 266
           +D AA+ ++  +  D        +W  S  ++   ++ A+       G   V   L +  
Sbjct: 132 SDAAAMRTRAVRRGDRWVIDGAKQWITSGDVAGVLVVWARTGPADAGGGGGVTAFLVEAG 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL   R ++K+G R+++TV L F          LG++               +  A  
Sbjct: 192 TPGLHVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDGGRVGIASQ 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +   +R +L  ++ YAR R   G  + +   +   +AD+A++   A  L+ R A   +  
Sbjct: 252 ATGTIRAALEASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTARLLALRAAALKEAG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + EA+ A       K W  + A   +  A++  GG GY E+  +AR++R++   +I 
Sbjct: 312 RPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVARYFRDARVQTIY 364

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+     L +   + K   
Sbjct: 365 EGTSEIQRLVIAREILKEGA 384


>gi|73955390|ref|XP_857108.1| PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain
           specific, mitochondrial precursor (VLCAD) isoform 4
           [Canis familiaris]
          Length = 615

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 155/385 (40%), Gaps = 46/385 (11%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQV-- 249
                   LTE   G+D A+I S       G  Y L+G K ++S+   +D F + A+   
Sbjct: 168 GESIAAFCLTEPSSGSDAASIRSSAVPSPCGKYYTLNGSKIWISNGGLADVFTVFAKTPV 227

Query: 250 -EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +   G     +   + + S  G+ +   + K+G +++ T E+ F +         NV  
Sbjct: 228 TDAATGAVKEKITAFVVERSFGGVTHGPPEKKMGIKASNTAEVYFDSVRVPA---ENVLG 284

Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                 K+ ++ L++    ++          +A+A+ +A  R   G  + +  +++  +A
Sbjct: 285 EVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHAANRTQFGEKIHNFGLIQEKLA 344

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A+      ++++ ++ + D+  +        +I A I+K +  + A  V  E ++ +G
Sbjct: 345 RMAMLQYVTESMAYMVSANMDQGSTD------FQIEAAISKIFGSEAAWKVTDECIQILG 398

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG------TNLFEQLFSTL 472
           G G+++E  + R  R+     I  G+ + + L V     ++KG       N  +  F   
Sbjct: 399 GMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGNALKNPFGNA 458

Query: 473 EQDLGSSGKKVIT------------ILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
              LG +GK++              I+   ++   E    A    E+ A    A  L + 
Sbjct: 459 GLLLGEAGKQLRRRAGLGSGLSLSGIIHQELNRSGELTVQA---LEQFATVVEAK-LIKH 514

Query: 521 GMNDIADVFLENRFLDNCHSTHCML 545
               + + F+  R  D+    + M+
Sbjct: 515 KKGIVNEQFVLQRLADSAIDLYAMV 539


>gi|312376076|gb|EFR23271.1| hypothetical protein AND_13184 [Anopheles darlingi]
          Length = 404

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 158/409 (38%), Gaps = 39/409 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +EL R+    + +     P     D++ F PA H  + +    GL        F 
Sbjct: 24  LSAEHRELQRICRQFSDR--ELKPAASEIDRLGFFPAQH--IAKLASMGLMRVTVSPQFG 79

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                  G ++S      A+++  + T      +  K  S    
Sbjct: 80  GSGMDMLSLSLIVEELSRGCGSTGSIVSIHNCLYANLLDRLGTDDQRNRFFSKYPS---- 135

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF- 243
                            L+E   G+D+AA+T++  + SDG + L+G K +++S +     
Sbjct: 136 ----------DTIGAFALSEAGAGSDVAAMTTRAAQSSDGSWLLNGRKAWVTSGVEAVAG 185

Query: 244 IMLAQVEGRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           I+   ++  +G   +   L D       GL   R ++K+G R  +T +L   N       
Sbjct: 186 IVFGTIDASLGYKGISAFLVDFEEAKAKGLSLGRPEDKLGIRGTSTCDLVLENVSIPA-- 243

Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
             NV       M+I +  LD A + ++   + +A+A     + YA++R   GG LID P 
Sbjct: 244 -ENVLGPVGGGMRIAMEQLDRARIGIASQAIGIAQASLEESVAYAKQRTAFGGTLIDLPA 302

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA+I + I  A  L  + A   D  +  ++  + A+ +A  T  +           
Sbjct: 303 VRTRIAEIGMRIETARLLVRKAAGEVDRGQRATKACSMAKWVAGETATFA-------AHG 355

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + +GG GYI+     R YR++    I  G  +     V + + K  +
Sbjct: 356 CQQIMGGMGYIKNLPAERFYRDARITEIYGGVTDVQKSIVADAIIKELD 404


>gi|288924301|ref|ZP_06418319.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288344353|gb|EFC78864.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 399

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 125/386 (32%), Gaps = 38/386 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D  EF  A    ++     GL        +  +                  +    +
Sbjct: 37  ERKD--EFPDAIVEAMK---EMGLFGITIPEQYGGLGESLLTYALVVEEIARGWMSVSGV 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++     A +V    T        PK+ + E             V     ++E   G+D+
Sbjct: 92  INTHFIVAYLVLQHGTEEQRARLLPKMATGE-------------VRGAFSMSEPGCGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLED 264
           +AIT++  +  D         W  +   +     L + +            FL+ +    
Sbjct: 139 SAITTRADRDGDDYVVNGQKMWLTNGARAGLVATLVKTDEGADSVYRNMTTFLLEKEPGF 198

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
           G+  G+      +K+G +   T E+            L       +    ++       +
Sbjct: 199 GTHGGITIPGKLDKLGYKGVETTEMILDGHRTPASSILGGPEAAGKGFYQMMDGVEVGRV 258

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  +   M  +   AI YA++R   G  + D   +   +A++A  + A   +    A 
Sbjct: 259 NVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLAEMATKVEAGHLMMVNAAR 318

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +    EA  A+ +A        +    V  E+    GG GY +E  I R YRE+P
Sbjct: 319 KKDSGQRNDVEAGMAKFLA-------SEYCHEVTTESFRIHGGYGYSKEYEIERLYREAP 371

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+       +   L K   L
Sbjct: 372 FMLIGEGTSEVQKRIISRALLKEYKL 397


>gi|167524677|ref|XP_001746674.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774944|gb|EDQ88570.1| predicted protein [Monosiga brevicollis MX1]
          Length = 509

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 130/407 (31%), Gaps = 51/407 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD  E  P    +LR     G         F      +              +  
Sbjct: 113 PHMQAWDADEVFP--RDVLRELASLGYGAIYAREEFGGSGLSRLAASLIFEALSTGCVST 170

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A MV          ++ P++ S +                   L E   G
Sbjct: 171 TAYLSIHNMCAWMVDTYGNEAQRAEYLPRLASMDVRTGLPLIDC-----PSAWLPEPGAG 225

Query: 209 TDIAAITSQGQKIS---------------------------------DGIYCLSGHKWFL 235
           +D A++++   +                                      + L+G K F+
Sbjct: 226 SDAASLSTTAVRDGTCVTVCSPLPTRRLCACALVRLGPLRMLIGLFLGDEFVLNGTKAFI 285

Query: 236 SSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           S    SD ++++ +  G  G   +   + +    GL Y + + K+G  S  T ++   + 
Sbjct: 286 SGGGESDVYLVMTRT-GSAGAKGISCFIVEKDTPGLSYGQKERKLGWNSQPTRQVIMEDV 344

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 +LG                 ++ A  S+ G + SL   + Y   R   G  + D
Sbjct: 345 RVPASNMLGGEGKGFNIAMAGLNGGRINIASCSLGGAQASLEGTLEYTSDRKQFGRAIND 404

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +A+ A  + A+  +    A   D       +++ A  +  + K         +
Sbjct: 405 NQAVQFRLAEYATGLTASRQMLRLAARELDA------KSSAAPALCAMAKLEVTDRCFDI 458

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +   ++  GG GY+++  I +  R+   + IL G+   M + +   L
Sbjct: 459 VNGCLQLHGGYGYLKDYKIQQFLRDLRVHQILEGTNEVMRMIISREL 505


>gi|118619109|ref|YP_907441.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
 gi|118571219|gb|ABL05970.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99]
          Length = 397

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 135/377 (35%), Gaps = 34/377 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E   A+ H ++ ++   GL   +    +  +                  +    +++ 
Sbjct: 35  ELERKDAYPHEIVEQTRSIGLFGLMIPEQYGGLGESLLTYALCVEELARGWMSVSGVLNT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++ + E                   ++E   G+D+AAI
Sbjct: 95  HFIVAYMLRQHGTEEQRQRFLPRMATGE-------------SRGAFSMSEPELGSDVAAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSP---- 267
            ++  + +DG Y + G K +L++  S   + +L + +         +   L +       
Sbjct: 142 RTRATRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGAAQPHRNLTAFLVEKPTGFGE 201

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              GL      +K+G +   T E+ F          L G       P+ D   +  ++ +
Sbjct: 202 VLPGLTIPGKIDKLGYKGIDTTEVIFDGYRATADDILGGTPGQGFFPMMDGIEVGRVNVS 261

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +      +   A+ YA++RH  G  + +   +   +A++A  + AA  +    A   D
Sbjct: 262 ARACGVGLRAFELAVRYAQQRHTFGKPIAEHQAISFQLAEMATKVEAAHLMMVHAARLKD 321

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +     A  A+ +A        +    V  ++    GG GY +E  I R  R++P   
Sbjct: 322 SGERNDVAAGMAKYLA-------SEYCSEVTQQSFRIHGGYGYSKEYEIERLMRDAPFLL 374

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 375 IGEGTSEIQKSIISKRL 391


>gi|240171232|ref|ZP_04749891.1| acyl-CoA dehydrogenase FadE [Mycobacterium kansasii ATCC 12478]
          Length = 387

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 132/382 (34%), Gaps = 30/382 (7%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L    P  ERW +   H        +    GL        F        +    A    +
Sbjct: 29  LKESTPNQERWARE--HQVDREYWNKLGDAGLLGLDLPERFGGAGGDFGYSAVFAEEQAL 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A   +      S  +A  +         + W P++ S                 + + +T
Sbjct: 87  AHDTSSGWAVHSPIAAHYLNTYGNEEQKQRWLPRVISG-------------DAVLAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  I +   +     Y L+G K F+S+    D  I++ + +   G   V  ++
Sbjct: 134 EPGAGSDLQGIRTTAVRDGSH-YVLNGSKTFISNGTHCDLLIIVTKTDPAAGAAGVSLIV 192

Query: 263 --EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL--NVSTGPVEDMKILI-- 316
              D S +G    R+  KIG     T EL FS+    +   L  N   G  + M+ L   
Sbjct: 193 AETDESLHGFERGRVLEKIGQHGQDTRELFFSDMRVPVANLLGDNEGLGFYQLMEQLARE 252

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A         ++ EAI Y R+R   G  LI     +  +A +  +  +        
Sbjct: 253 RLIIASQCAGLAECAVLEAIRYTRQREAFGRPLIKFQHSRFELAQLKAETLSIKTTVDHC 312

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              + +  +    A+ A+++A          A  ++   ++  GG GY+ E  IAR Y  
Sbjct: 313 VQQYIDGNNDPATASMAKLIAA-------DKAVDIVDRCLQFFGGYGYMMEYPIARAYAA 365

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+   M   +   L
Sbjct: 366 ARVTKIYGGTSEIMKEIISRSL 387


>gi|33592120|ref|NP_879764.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33602428|ref|NP_889988.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33571764|emb|CAE41265.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33576867|emb|CAE33947.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|332381536|gb|AEE66383.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 608

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/444 (18%), Positives = 158/444 (35%), Gaps = 64/444 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V   P +          G       + +      +     A      A L        +
Sbjct: 70  QVTTTPGFSQGFADYTAGGWQGLQHPQKWGGQGLPKVVAAPAGENIQAASLAFSLCPMLT 129

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +  + +    + + PK+   ++  T             + LTE + G+D+A + 
Sbjct: 130 DGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGSDLAQVA 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++  +  DG Y LSG K F++    D       ++LA+          +  F+VP+ L +
Sbjct: 177 TRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKGISLFIVPKYLVN 236

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEF--------SNTFGFLLGDLNVSTGPVED 311
                G  N +    L++K+G   + T  L +            G+L+G+ N     +  
Sbjct: 237 EDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFI 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIA 363
           M            +     +   A  YAR R     I        +   P ++R +  + 
Sbjct: 297 MMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAHHPDVQRMLLTMR 356

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
               AA A+S+  A + D      +A+ R+   A+   + PI K +  + A  V +  ++
Sbjct: 357 ALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG G+IEE   A+HYR++    I  G+      D++                  +D G
Sbjct: 417 VHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLVG-------------RKTLRDGG 463

Query: 478 SSGKKVITILRDSISLCKEDKGLA 501
           ++    I  +RD++     +   A
Sbjct: 464 ATAHASIAAMRDTLKAVAAEAQRA 487


>gi|227536382|ref|ZP_03966431.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243758|gb|EEI93773.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 592

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/459 (18%), Positives = 166/459 (36%), Gaps = 39/459 (8%)

Query: 92  ERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           ER D  +    P+   L+ ++   GL        +    +     +  A         A 
Sbjct: 50  ERIDAQEEGLMPS---LMDKAGELGLLGVSIPEEYGGFGKNFNTSMLVADAVGSGYSFAV 106

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +      +           + PK+ S E+                  LTE   G+
Sbjct: 107 ALSAHTGIGTLPILYYGNAEQKAKYIPKLASGEWK-------------ASYCLTEPNSGS 153

Query: 210 DIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           D  +  +  +  ++G  Y ++G K W  +   +D FI+ A+++       +   + +   
Sbjct: 154 DANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDK---NLTAFIVEKDF 210

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
            G+     ++K+G + ++T ++ F++    +   L +   G    + IL    +     +
Sbjct: 211 GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILNIGRIKLGAAT 270

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL-------- 376
           +   R  L +AI YA  R      +     ++  IA+ A+ + A  + ++R         
Sbjct: 271 IGSSRGVLTQAIKYANERVQFNLPISKFGAIRYKIAEAAIRLFAVESATYRAGQNIDDAY 330

Query: 377 ----ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   DEAK++ +      I   I K W  +M   V+ E ++  GG GY  +  + R
Sbjct: 331 DALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSEMLDYVVDEGVQIYGGMGYSADAPMER 390

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLEQDLGSSGKKVITILRDSI 491
            YR+S  N I  G+     L V+++L K     E  L        G           D  
Sbjct: 391 AYRDSRINRIFEGTNEVNRLLVVDMLLKRAMKGELDLMGPATAVAGELMSIPDFGDEDET 450

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
               E K LA      + +A +A       ++   ++ +
Sbjct: 451 PFAAEKKILANLKKAGLLIAGAAVQKLMMSLSKEQEILM 489


>gi|332520899|ref|ZP_08397359.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332043429|gb|EGI79625.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 602

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/466 (16%), Positives = 161/466 (34%), Gaps = 54/466 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++R++   G        ++  +                                +M + 
Sbjct: 66  EVMRKAGEMGFLGVAVPEAYGGLGMGFVSTCLTCDYISSGTGSFSTAFGAHTGIGTMPIT 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E+                  LTE   G+D  +  +  +   D
Sbjct: 126 LYGTEAQKQKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTTAELTED 172

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP---NGLCYQRLKNK 278
           G          W  ++      I+ A++E       +   + +  P   NG+     ++K
Sbjct: 173 GKSYKINGQKMWISNAGFCSVMIVFARIEDDK---NITGFIVEYDPENANGITLGEEEHK 229

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSL 332
           +G R+++T ++ F++T   +    N+  G  E  KI +  L+   + ++       R  L
Sbjct: 230 LGIRASSTRQVFFNDTKVPV---ENMLAGRGEGFKIAMNALNVGRIKLAAACLDSQRRIL 286

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + YA  R      + D   +K  +A++A +  A  + ++R A + ++  +  E A  
Sbjct: 287 TTGVQYANERKQFKTPISDFGAIKVKLAEMATNAYAGESATYRAAKNIEDRIAMREAAGN 346

Query: 393 ARIMA------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               A             I K    +   +   E ++  GG G+ EE  +   +R++   
Sbjct: 347 THQEAELKGVEEYAIECSILKVAVSEDVQSCADEGIQIFGGMGFSEETPMEAAWRDARIA 406

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISLCKEDKG 499
            I  G+     +  + +L K             Q +      + +    D   L  E+K 
Sbjct: 407 RIYEGTNEINRMLSVGMLVKKAMKGHVDLLNPAQAVQQELMGIPSFDTPDYSELFSEEKA 466

Query: 500 LARFLTEKIALASSAAALYRAGMN---------DIADVFLENRFLD 536
           +   L +K+ L  + AA+ + G +           AD+ +E    +
Sbjct: 467 MIAKL-KKVFLMVAGAAVQKFGPDLEEHQQLLIAAADILIEIYMAE 511


>gi|167899585|ref|ZP_02486986.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
          Length = 390

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAG-------------RRISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|296135828|ref|YP_003643070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295795950|gb|ADG30740.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 594

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 94/488 (19%), Positives = 186/488 (38%), Gaps = 65/488 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P      LE  G++        L R  + +           +   KV   P +    R+ 
Sbjct: 34  PDTAAAVLEECGKF-NRDVIAPLNREGDLHP------SAWAD--GKVTTTPGFKQAFRQF 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT--P 168
           +  G         F      ++  I AA   ++        + P ++  ++ AL+T    
Sbjct: 85  VDGGWQGLQHSAEFGGQGLPKS--ISAACTEMLNSANLSFALCPLLSDGAIEALLTAGID 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PK+ S E+  T             + LTE + G+D+A + S+ +   DG Y L
Sbjct: 143 AQKQRYIPKLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQGDGTYRL 189

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            G K +++    D       ++LA++         +  F+VP++LEDG  N +    +++
Sbjct: 190 FGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKGISLFIVPKVLEDGRRNDVWCASIEH 249

Query: 278 KIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           K+G +++ T  L + +          G L+G+ N     +  M         +  ++   
Sbjct: 250 KLGIKASPTAVLIYGDGKGEVGTGAIGELVGEANRGLEYMFIMMNAARYAVGLQGIAVAE 309

Query: 330 VSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +  +A  YA+ R  S            ++  P ++R +  +        AL+   A+  
Sbjct: 310 RAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPDVRRMLMTMRALTEGCRALALVAASLH 369

Query: 381 DEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D  ++  +    A   A      P+ K +  +M+  V +  ++  GG G+IEE   A++Y
Sbjct: 370 DVGRAHPDAGQRAAHEAAYEFLVPLVKGYSTEMSIEVASLGVQVHGGMGFIEETGAAQYY 429

Query: 435 RESPANSILLGSGNAMV--LDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVITILRD 489
           R++   +I  G+       L     +  G  L   F    S +E+ L ++G      +  
Sbjct: 430 RDARILTIYEGTTAIQANDLVGRKTVRDGGALALHFAARVSKVEEALTATGDAQAVAMAG 489

Query: 490 SISLCKED 497
            +   +E 
Sbjct: 490 QLRQAREA 497


>gi|167624357|ref|YP_001674651.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354379|gb|ABZ76992.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 596

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 91/501 (18%), Positives = 180/501 (35%), Gaps = 63/501 (12%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R    KV     +    ++ + +G      D  F      +   + A  +     
Sbjct: 61  DIEGCRLQDGKVVTPKGFIEAYQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTN 120

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +        +  + + +    +  +   +  K+ S E+  T             + LTE 
Sbjct: 121 MAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTGT-------------MNLTES 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
             GTD+A + ++    S+G + ++G K F+SS   D       ++LA++         + 
Sbjct: 168 HAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGIS 227

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP++L +     G  N L    L++K+G   N+T  + F    G L+G+ +     +
Sbjct: 228 LFVVPKVLINDDGSLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAM 287

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMK 356
             M     L   +  +    ++   A+ YA+ R   G  L                  ++
Sbjct: 288 FTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQ-GRALSGVKQAAQAADSILVHGDVR 346

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPA 410
           R +           AL  + A   DEA+  S        +  A +  PI K +       
Sbjct: 347 RMLLSQKAFNEGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFVTDQGFK 406

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF-- 465
              +A +  GG GYI E  + +  R+S    I  G+     LD++    L +K   L   
Sbjct: 407 ACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLW 466

Query: 466 -EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA----LASSAAALYRA 520
            EQ+   +++++G+   K    +   +    + +    ++ E  A    +  +A+  Y  
Sbjct: 467 SEQVKLLIQRNMGNDAMK--PYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQ 524

Query: 521 GMNDIADVFLENRFLDNCHST 541
            +   A  ++  R  +     
Sbjct: 525 ILGITALGWMWTRIAEKALHQ 545


>gi|269125478|ref|YP_003298848.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310436|gb|ACY96810.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 599

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 104/547 (19%), Positives = 195/547 (35%), Gaps = 76/547 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A         +  LGE + +       ++A+ + P L      G    +V   P     L
Sbjct: 31  AEHSRETFDAVLELGERIATDHFAPHNKLADAHEPHL---DADG----RVVMIPEVKRAL 83

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R     GL     D S   +             +  A +        ++ +A+++    T
Sbjct: 84  RVFAEAGLLAGELDESLGGMQLPTVVSKAVLAWFQAANVGTAAYPFLTIANANLLVEYGT 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     W               PM        + L+E + G+ +A I ++ +   DG Y 
Sbjct: 144 PEQVDTWV-------------RPMAAGRFLGTMCLSEPQAGSSLADIATRAEPQPDGTYR 190

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271
           L G K ++S+   +       ++LA++ G       +  F+VP++L +     G  N + 
Sbjct: 191 LYGTKMWISAGEHELSENIVHLVLAKIPGGPPGVKGISLFIVPKVLVNADGSLGERNDIA 250

Query: 272 YQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              L +K+G R      L F              G+L+G+ +     +  M     +   
Sbjct: 251 LVGLNHKMGYRGTVNTVLNFGEGAHTPGGAPGAVGYLVGEPHKGLSYMFHMMNEARIGVG 310

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + + +        ++ YA+ R                 LI+   ++R +      +  A 
Sbjct: 311 LGAAALGYTGYLHSLEYAKVRLQGRPPAAKDPALPPVPLIEHADVRRMLLAQKAYVEGAL 370

Query: 371 ALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL    +   D++K      +R   A    ++ PI K W  +      + A++  GG GY
Sbjct: 371 ALGLYCSLLVDDSKTAEDAVARDRAALLLDVLTPIAKSWPSQWCLEANSLAIQVHGGYGY 430

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ------DL 476
             E ++ + YR++  N I  G+     LD+L   ++ K       L  T+        DL
Sbjct: 431 TREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKNGMGLRVLGETISATVQCAIDL 490

Query: 477 GSSGKKVITILRDS---ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           G    ++   L+D+   ++L       A      + LA+S+  L  AG   +A ++LE  
Sbjct: 491 GGETAEMGRALQDAFERLTLVTAQLWSAGDPA--VTLANSSIYLEAAGHIVVAWIWLEQV 548

Query: 534 FLDNCHS 540
              +   
Sbjct: 549 LAAHGKD 555


>gi|238026553|ref|YP_002910784.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
 gi|237875747|gb|ACR28080.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
          Length = 596

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 91/482 (18%), Positives = 182/482 (37%), Gaps = 59/482 (12%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSI 111
               E  G         E A+        L+      P   R  +V     +    R+  
Sbjct: 26  LPGFEDAGFDTAQAVLDESAKFCGEVLAPLNVEGDRQPSAWRDGEVAATAGFGEAFRQFA 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169
             G         ++     +   I  A + ++        + P +T  ++ AL+T  +  
Sbjct: 86  AGGWQGLQHPAEYDGQGLPK--LIATACIEMLNAANLSFALCPLLTDGAIEALLTAGSDA 143

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               + PK+ S E+  T             + LTE + G+D+A + ++ +   DG Y + 
Sbjct: 144 QKARYVPKLVSGEWTGT-------------MNLTEPQAGSDLALVRARAEPQGDGSYKVF 190

Query: 230 GHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQ 273
           G K F++    D       ++LA+  G       +  F+VP+ L +     G+ N +   
Sbjct: 191 GTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFIVPKFLVNEDGSLGARNDVHCV 250

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T  L++ +     G L+G+ +     +  M         +  +     
Sbjct: 251 SIEHKLGIKASPTAVLQYGDHGGAIGHLVGEEHRGLEYMFIMMNAARFGVGMQGIGVAER 310

Query: 331 SLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  +A  +A+ R  S            +I  P ++R +  +      A AL++  A   D
Sbjct: 311 AYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLGTMRALTEGARALAYVAAAHSD 370

Query: 382 EAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A +  +EA      A    + P+ K W  +M   V +  ++  GG G+IEE   A++YR
Sbjct: 371 HAHAHPDEAERKRHQAIYEYLVPVVKGWSTEMVNEVASLGVQIHGGMGFIEETGAAQYYR 430

Query: 436 ESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDS 490
           ++   +I  G+       L     +  G  + + L + +    + LG+        +R  
Sbjct: 431 DARILAIYEGTTAIQANDLVGRKTVRDGGAVAKALAAAIGETVEALGAHDSPACAAMRRH 490

Query: 491 IS 492
           +S
Sbjct: 491 LS 492


>gi|89901589|ref|YP_524060.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89346326|gb|ABD70529.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 383

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 143/384 (37%), Gaps = 30/384 (7%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A    P L  +   G+        PA H L ++    GL    +   +  +    ++   
Sbjct: 19  AKEINPHLPQWEAAGQ-------FPA-HELFKKMGDLGLLGIKYPVEYGGMGLDFSYS-- 68

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
                +MA+            +  +   M TP + +       S E      AP     +
Sbjct: 69  ----MVMAEALGECNAGGVPMAIGVQTDMCTPALARFG-----SDELKREFLAPSIAGDM 119

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
              +G++E  GG+D+AA+ +  +K  D         W  +   +D   +LA         
Sbjct: 120 VGCIGVSEVGGGSDVAALKTTAKKDGDDYLINGSKMWITNGMQADWCCLLANTSEGSVHK 179

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL 315
               ++      G+  Q++ +KIG  S+ T +L F N        +     G +  M   
Sbjct: 180 NKSLIMVRLDSPGVTRQKI-HKIGMDSSDTAQLFFDNVRVPQRNLIGQEGMGFMFQMLQF 238

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A   +  +   + + I Y R+R   G  ++   V+   +A++  ++ A  AL+
Sbjct: 239 QEERLYGAAGCLRSLDRLIDQTIDYTRQRQTFGKPILHNQVVHFRLAELRTEVEALRALT 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R   S+   K  +        +A + K    +++  V    ++  GG GY  +  I++ 
Sbjct: 299 YRAVESYISGKDVTR-------LASMAKLKAGRLSREVADSCLQYWGGMGYTRDNPISQA 351

Query: 434 YRESPANSILLGSGNAMVLDVLNL 457
           YR+S   SI  G+   M+  +  L
Sbjct: 352 YRDSRLISIGGGADEIMLGIICKL 375


>gi|187919810|ref|YP_001888841.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718248|gb|ACD19471.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 381

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 132/366 (36%), Gaps = 32/366 (8%)

Query: 102 AW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           AW  + L+     G    +    +            A   +         +M     +A 
Sbjct: 40  AWPRSELKALAELGFLGMLIPEQYGGSGAGILDFCIAQHEFAAVDAGLATIMHVHNFTAL 99

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + + P +   E                   LTE   G+D A++ +  ++
Sbjct: 100 TIVEHGTETQKQRYLPAMACGE-------------SIGAFLLTEPHAGSDTASLRASARR 146

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G K F+S+   +   I  A  +   G       + D +  G    R+++K+
Sbjct: 147 EGDH-YVLNGTKQFISNGSEAGVGIAFAITDKAAGKRGASTFIIDPNAPGYSVTRIESKL 205

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLA 333
           G  +  T ++      G+ +   N+     +  + ++       +  A +S    R +L 
Sbjct: 206 GQHTAHTAQIALE---GYRVPAENLLGLEGDGYRTVMAGVSDGRIGIAFISAGVARGALD 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YAR R   GG L     +   +AD+A  +  A       A   D      +E    
Sbjct: 263 AAVKYAREREAYGGPLTKLQAVAFDLADMAAQVDVAWQYCLHAARLRDAGFDCIKE---- 318

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A I K +  ++A  V ++A++  GG GY+ +  + R+ R+     I  G+ +   L 
Sbjct: 319 ---ASIAKLFASEIAEKVCSDALQIHGGYGYLTDFPVERYLRDVRICKIYEGTSHIQKLI 375

Query: 454 VLNLLE 459
           +   L+
Sbjct: 376 ISRNLD 381


>gi|290956279|ref|YP_003487461.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260645805|emb|CBG68896.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 401

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQQIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDVRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  +  D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSKAVRDGDEYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKQIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|257094018|ref|YP_003167659.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046542|gb|ACV35730.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 607

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 86/452 (19%), Positives = 161/452 (35%), Gaps = 57/452 (12%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPA 102
           ++P+  +  L   GE         LA  A      L      G+R        +V     
Sbjct: 20  DYPAH-YARLSSGGEATPDMVEAILAGAATLCEEVLAPLSLSGDREGCHFKDGEVTTPAG 78

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    R+ +  G     +   +       +  +    +   A          S+   + +
Sbjct: 79  FREAYRKFVEGGWQGLSFPTKYGGHGLPTSMSVFKTEMMGAANWSFNMYPGLSLGCINTL 138

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + P + S E+  T             + LTE + GTD+  +T++ +   
Sbjct: 139 LKYGTEAQKSLYLPALVSGEWTGT-------------MCLTEAQCGTDLGQVTTRAESRP 185

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG Y ++G K F+S+   D       I+LA++ G       +  F+VP+ L +     G 
Sbjct: 186 DGSYAITGTKMFISAGEHDLAANIVHIVLARLSGAPAGTRGLSLFVVPKFLPNEGGSPGQ 245

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N +    +++K+G R++ T  L F    G L+ + N     +        L  A+  ++
Sbjct: 246 RNAVNCGAIEHKMGIRASPTAVLNFDAAVGQLIFEPNKGLEAMFTFMNTARLGIALQGIA 305

Query: 327 GMRVSLAEAIHYARRRH----VSGGI--------LIDQPVMKRAIADIALDIAAATALSF 374
               S   A+ YAR R     +SG          LI    ++R +           A+ +
Sbjct: 306 HAEASFQGALAYARERRSMRALSGKKDPDSVADALIWHADVRRMLLTQKAIAEGGRAMIY 365

Query: 375 RLANSFD---------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             A + D         +  +++E         PI K +  ++        M+  GG GYI
Sbjct: 366 AAAQTADIMFNAVLEEDRATQAEYDNLLGFYTPILKGFLTELGLEAANLGMQVFGGHGYI 425

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            E  + +  R++   ++  G+     LD+L  
Sbjct: 426 HEHGMEQMVRDARIATLYEGTTGIQALDLLGR 457


>gi|322435753|ref|YP_004217965.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163480|gb|ADW69185.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 608

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 84/454 (18%), Positives = 161/454 (35%), Gaps = 39/454 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L++++   GL  +     +  +   +A     A         +  + + +      + 
Sbjct: 74  RDLIKKAAELGLTSTDIPEEYGGLEMDKATSAIIADHIAKQGSFSVAISAHTGIGTLPLV 133

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      +  KI                ++     L+E   G+D     ++     D
Sbjct: 134 WYGTHEQKTKYLTKI-------------ADGTIVAAYALSESTSGSDAVNARTRAVLSED 180

Query: 224 G-IYCLSG-HKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           G  Y L+G   W  +   +D + + A+         G   +   L +    G      ++
Sbjct: 181 GQHYILNGEKMWITNGGFADLYTVFAKCLIPSGKGAGEEKLTAFLIERGTPGFTNGPEEH 240

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R ++T  L  ++       LLG++        ++  +        +V   R +L  
Sbjct: 241 KLGIRGSSTTPLILNDCKIPAANLLGEVGKGHHIAFNILNVGRYKLGNAAVGAARHTLGN 300

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------ 388
           AI YAR R   G  + +  +++  +AD+A+ I    AL +R     D+A +++E      
Sbjct: 301 AIRYARDRKAFGKSISEFGLIQEKLADMAVGIYVGEALCYRTVGLIDQALAQTEKSDTPA 360

Query: 389 ---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +   I K W  +M   V+ E ++   G GY+EE    R YR++  N I  G
Sbjct: 361 IQRAIESYAVECSIVKVWASEMLDFVVDETVQIFAGYGYVEEFPAERAYRDARINRIFEG 420

Query: 446 SGNAMVLDVLNLLEKGTNLFEQ-LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
           +     L +   L K     +  L   ++  +       I        L  E   LA   
Sbjct: 421 TNEINRLIITGRLMKAALAGQLPLLPAIKALMDEVLAGPIEKEDREGPLAAECDLLAAAK 480

Query: 505 TEKIALASSAAALY-------RAGMNDIADVFLE 531
              + +A +A+  Y       +  M  IAD+ ++
Sbjct: 481 KLTLFIAGTASQRYMQKLVDEQEVMAAIADMIIQ 514


>gi|111222577|ref|YP_713371.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150109|emb|CAJ61804.1| Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 383

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 129/380 (33%), Gaps = 35/380 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P  + ++ +    GL    +  S             A      A    
Sbjct: 27  PAAAVHDEAKTFP--YEVVAQMAEMGLFGLPFPESVGGQGADYFTLCLAIEELARADSSV 84

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +   V   +M      +    + W P + S                    GLTE   
Sbjct: 85  AITLEAGVGLGAMPVYRFGSDAQKEQWLPLLTSG-------------RALGAFGLTEPGA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGR--VGCFLVPRLLE 263
           G+D     +  +   D     +G K F+++  +D    + +  V G+   G   +  +L 
Sbjct: 132 GSDAGGTRTTARLDGDEWVV-NGSKAFITNSGTDITRLVTVTAVTGQTAAGRKEISTILV 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
                G   Q   +K+G  ++ T  L F +        L        +   L  LD   +
Sbjct: 191 PVPTPGFTAQPAYSKVGWHASDTHPLTFDDVRVPAENLLGARGRGYANF--LSILDEGRI 248

Query: 324 SVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S + V LA+A       YA+ R   G  +     +   IA++      A A  +  A+
Sbjct: 249 AISALAVGLAQACVDESARYAKEREAFGAPIGRNQAIAFKIAEMETRTYVARAAYYDAAS 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +   ++AA A       K +  + A     EA +  GG G++ E  +ARH+R+S 
Sbjct: 309 RMLAGQPFKKQAAMA-------KLFSSEAAVTNAREATQIFGGYGFMNEYPVARHWRDSK 361

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 362 ILEIGEGTSEVQKMLIARDL 381


>gi|300783006|ref|YP_003763297.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792520|gb|ADJ42895.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 398

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 127/384 (33%), Gaps = 34/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  +  + +PA   ++      GL        +  +                  +  
Sbjct: 31  PHAQELEHADTYPA--DIVAGMKEMGLFGITIPEEYGGLGESLLTYALVVEEIARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M++   T    + + P++ + E             V     ++E   G
Sbjct: 89  SGVINTHFIVAHMISRHGTEAQKQHFLPRMATGE-------------VRGSFSMSEPDLG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           +D+AAI ++ +K  DG        W  +   S+   +L + +         +   L +  
Sbjct: 136 SDVAAIKTKAKKTDDGYVIDGSKMWLTNGGSSNLIALLVKTDEGAEKPHQNLTTFLVEKP 195

Query: 267 ------PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILI 316
                   GL      +K+G +   T E  F          L          + D   + 
Sbjct: 196 EGFGEVAPGLTIPGKIDKMGYKGVDTTEAVFDGYKIGADMVLGEAPGKGFAYMMDGVEVG 255

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  +      +   A+ YA++R   G  + +   +   +A++A  + AA  +    
Sbjct: 256 RVNVAARACGIAIRAFELAVEYAQQRKTFGKAIAEHQAVAFKLAEMATKVEAAHLMMVNA 315

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D       EA  A+++A        +    V  ++    GG GY +E  I R  RE
Sbjct: 316 ARLKDSGARNDVEAGMAKLIA-------SEYCAEVTQDSFRIHGGYGYSKEYEIERLMRE 368

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +P   I  G+       +   L +
Sbjct: 369 APFLLIGEGTSEIQKTIISRGLLR 392


>gi|33599571|ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567167|emb|CAE31081.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 385

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 149/376 (39%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  + W+     P    ++RR    G+    +  S+          +  A     +    
Sbjct: 32  PHAQAWEHDGHTP--RPVIRRMGELGMLGMRFPESYGGADADTVASVVFAEELGRSTFGG 89

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +++ + T++  +A + TP+    + P I   E               + + +TE  
Sbjct: 90  FAITILTQTDTASPPIAAVGTPQQKARYLPAIVRGEC-------------LVAIAMTEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDG 265
            G+DIA + ++  +  D         +  +   +D +++ A+ +        V   L D 
Sbjct: 137 VGSDIATLRTRAVRDGDEWVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLVDK 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              GL  +R  +K+G +S+ T +L F         LLG+ N     +        L  A 
Sbjct: 197 GTPGLRVERRLDKMGWKSSDTAQLSFDGCRVPAGALLGEPNRGFAALMRNVQNERLVLAA 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + ++A+ + Y R R   G  L D+  ++  +A +A  + +A    + +A     
Sbjct: 257 QALGESQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSVAALDAR 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E +  + +       C ++   V+ + ++  G +GY++  ++ R YR++  ++I
Sbjct: 317 GVECVKEVSMIKAL-------CGELVNEVMDDCVQFHGATGYMQGTAVERMYRDARVHAI 369

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+ +V   +
Sbjct: 370 GGGATEIMLEEVAKRM 385


>gi|196014203|ref|XP_002116961.1| hypothetical protein TRIADDRAFT_31731 [Trichoplax adhaerens]
 gi|190580452|gb|EDV20535.1| hypothetical protein TRIADDRAFT_31731 [Trichoplax adhaerens]
          Length = 575

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 80/454 (17%), Positives = 168/454 (37%), Gaps = 47/454 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTP 168
             G         +  +    A   R   + +  + +    ++  V        + L  T 
Sbjct: 72  EIGGLGLKAPEKYGGLEFNYAQFSRV--VEVFGKYDLSFTITAGVHQSIGYQGLVLFGTE 129

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YC 227
              + + P +                       LTE   G+D AA+ ++    +DG  Y 
Sbjct: 130 EQKQKYLPDL-------------AAGKKIAAFALTEPTAGSDAAALRTKAVLDNDGKHYI 176

Query: 228 LSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           L+G+K W  +  ++    + A+V     +       +   + +    G+     + K+G 
Sbjct: 177 LNGNKLWTTNGGIAGIITVFARVERRKEDPEDTAEGITAFIIEKDFPGVSNGPPEKKMGL 236

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVS-----LAEA 335
           RS  T  L F N    +    NV     E  KI + + ++    ++   V      +  A
Sbjct: 237 RSCNTAALYFDNVKVPV---ENVIGKVGEGFKIALSIVNTGRFGINASLVGTTRELVRRA 293

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             +   R      LI+   ++  +A +A+   A  +++  L N+ D   +  +      +
Sbjct: 294 SDHVNTRVQFNQKLIEFQAIQEKLAKMAMFHYAIESITLFLCNNMDGGITDIQ------L 347

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              ++K +  + A   I E ++ +GG+GY+ +  I RH R++    I  G+ + + L V 
Sbjct: 348 ETAMSKIFTTEAAWYCIDECIQVLGGNGYMRDNDIERHLRDARVFRIFEGANDTLRLFVA 407

Query: 456 NLLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512
           +   +      +      +D G   S  ++  + L ++++    D  L   +T+++   S
Sbjct: 408 STGIQAAAKRMRESQKSMKDCGSQESDKEQGNSDLVEAVATPLRDSAL--KVTQRVEEFS 465

Query: 513 SAA--ALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           SA    L++ G +     FL  R  ++      M
Sbjct: 466 SAVKLLLHKHGKDIGNQQFLLTRLANSAVDLFAM 499


>gi|311108082|ref|YP_003980935.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762771|gb|ADP18220.1| acyl-CoA dehydrogenase, N-terminal domain protein 16 [Achromobacter
           xylosoxidans A8]
          Length = 386

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 151/398 (37%), Gaps = 29/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R       +     P  + W+  +  PA H +++     GL        +  
Sbjct: 4   THEHRELERTTRRIIAE--HLDPYLDEWEAEQIFPA-HRVMKALGSAGLLGIGKAAEYGG 60

Query: 127 VVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++++  A     + +      +   S      +A   +  + +++          
Sbjct: 61  MELDFSYEMVFAETLGEVRSSGLTSAIGVQSTMCTPALAHHGSDALKREYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
               AP     +   +G++E   G+D++ I +  ++  D         W  +    D   
Sbjct: 112 ----APTIAGDLVGCIGVSEASAGSDVSRIKTWARRDGDDYIINGSKMWITNGVQGDWIC 167

Query: 245 MLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LG 300
           +L       G       ++      G+   R  +K+  R++ T EL F +        +G
Sbjct: 168 LLCNTSQEGGPHKNKSLIIVPLKSPGVSVSRKLDKLVLRASDTAELFFDDVRVPASNCIG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           + N+      +      +  A  S+  M  ++ E I YA +R V GG ++   V+   +A
Sbjct: 228 EENMGFIYQMEQFQEERMFVAARSMRSMERAIEETIEYAGQRQVFGGTILSNQVVYHKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++  +I A  +L +R  + + + +  ++        A + KY+  K++  +  E ++  G
Sbjct: 288 EMQTEIQALRSLLYRAIDLYMDGQDIAQ-------FASMAKYYAGKLSMKIPNECLQFWG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G G + E  I+R YR+    +I  G+   M+  +   +
Sbjct: 341 GQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTM 378


>gi|148556505|ref|YP_001264087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148501695|gb|ABQ69949.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 375

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 115/296 (38%), Gaps = 23/296 (7%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +      + P++                 +     LTE   G+D AA+ ++  +   G 
Sbjct: 100 GSEAQKARFLPELIGG-------------RMIGAFALTEADAGSDAAALRTRATRAEGGW 146

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 ++  S  ++   ++ A  +   G   +   L      G    ++++K+G  ++ 
Sbjct: 147 VLNGAKQFITSGKIAGVAMVFAVTDPAAGKKGISAFLVPTDSPGYAVDKVEHKLGQAASD 206

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  + F + F   G L G                 +  A   V   + +L  A+ YAR R
Sbjct: 207 TCAIRFDDLFVEDGLLFGAEGRGYNIALANLEQGRIGIAAQCVGMAQAALEIAVAYARDR 266

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +I+   +   +AD+A  + AA  L    A+  D      +EA+ A       K 
Sbjct: 267 RSMGKPIIEHQAVGFRLADLATRLEAARQLVLHAASVKDAGLPCLKEASMA-------KL 319

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + A A+++ A++ +GG GY+EE  +A+ YR+     I  G+ +   + +   L
Sbjct: 320 FASEAAEAIVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTSDIQRMVIARAL 375


>gi|53723047|ref|YP_112032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|167821137|ref|ZP_02452817.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|52213461|emb|CAH39507.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
          Length = 390

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/382 (22%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAG-------------RRISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         I K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|163848214|ref|YP_001636258.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222526122|ref|YP_002570593.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163669503|gb|ABY35869.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450001|gb|ACM54267.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 417

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 156/416 (37%), Gaps = 39/416 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
            L AN+   +  E E+L + V +   +E+A       P +  +   G   +  E  P   
Sbjct: 2   DLTANYDMFLGPEHEMLRQTVRNFAEREVA-------PHIREWDRSGAAAEGPEDRPHLR 54

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L+R    GL      + +        A  +    L  +       +   +  ++  + 
Sbjct: 55  PVLKRMGELGLLGICIPQRYGGAGMDYLALAVVCEELERVDSFLRVVMSVHTGLNSLSIF 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +               P  +        LTE   GTD AA+ +  ++  +
Sbjct: 115 QWGTEEQKQRFL-------------VPQARGEKLAAFCLTEPNSGTDAAAMQATARRDGE 161

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K ++S + ++D F++ A+ +   G   +   + + S  G+    +  K+G R
Sbjct: 162 D-YILNGEKIWISLADLADNFLVFAKTDPGAGPRGITAFIVERSMPGVSSYPIHGKLGVR 220

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----I 336
           +  T  + F++        L       E  KI +  LD+   +V+     L +A     I
Sbjct: 221 AGNTGGVVFNDVRVPRSHRLG---EEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASI 277

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YAR R   G  + +  ++KR I+ +   +  +  L +R     ++    + E   A+  
Sbjct: 278 RYARERQTFGVPIAEHQLVKRMISHMVRKLDTSRLLVYRAGWMKNKGIRNTRETTLAKWH 337

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A ++ +           +A++  G  GY +E  + R+ R +    I  G+     L
Sbjct: 338 ATVSSF-------EAADDAIQIHGAYGYADEYPVERYLRNARGAIIYEGTRELQEL 386


>gi|222109342|ref|YP_002551606.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728786|gb|ACM31606.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 384

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 130/397 (32%), Gaps = 43/397 (10%)

Query: 75  RMANYN------TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           R A  +       P L  +   G         P    + R++  +GL  ++    +    
Sbjct: 18  RDAVRHFFDKEIVPHLADWERNG-------IVP--KEVWRKAGREGLLNTMLPEPYG-SG 67

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               H              A      S   A  +        H  W PK+ + E      
Sbjct: 68  GDFGHAAVLIEEVGRTNATALGFPLHSDIVAPYIYAYGNQEQHDRWLPKMAAGEM----- 122

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPM-SDAFI 244
                      + +TE   G+D+ ++ +  + +       Y ++G K F+++ + S+  I
Sbjct: 123 --------IGAIAMTEPGAGSDLKSVRTTAKLVKSSEGDHYVINGAKTFITNGINSEIVI 174

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301
           ++ +    +G   V  ++ +    G    R   KIG     T EL F N     G LLG+
Sbjct: 175 VVCKTAPDLGAKGVSLIVVEDGTPGFSKGRKLEKIGLMGQDTSELFFDNVKVPVGNLLGE 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            N+    +        L  A+ +   +   L + I Y R R   G  + +    +  +A+
Sbjct: 235 ENMGFKYLMQELAQERLVVAVRAARCIESFLQKTIDYTRERKAFGQTVFEFQNTRFKLAE 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                               + K   E AA         K     +   ++ E ++  GG
Sbjct: 295 AKAQATMLRTFVDECMKLHMQRKLTPERAAM-------VKLNATALQNKLLDEFLQLHGG 347

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ E  + R + ++    I  GS   M   +   L
Sbjct: 348 YGYMTEYQVGRAWTDARIGRIYGGSDEIMKEIIARTL 384


>gi|291226346|ref|XP_002733155.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase-like [Saccoglossus
           kowalevskii]
          Length = 433

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 131/371 (35%), Gaps = 42/371 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D  +    +   +++  H GL+       +          +        A    
Sbjct: 94  PYASEIDSTDEFVGFRDFVKKCGHLGLNGITAPVEYGGTGMGAMETVIVGEEIARASAGI 153

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    + ++   + +         K + PK+ +               +  GL ++E   
Sbjct: 154 GLSYGAHTILCINQIVRHGNDAQKKKYLPKLIAG-------------DLIGGLAMSEVDA 200

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDG 265
           G                 Y L+G K W  + P++D F++ A+ +        +   + + 
Sbjct: 201 G---------------DYYVLNGSKFWITNGPIADVFVVYAKTDLSGQPQHGISTFIIER 245

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              G       +K+G R + T EL F N    +    N+  G  +       + S I+ V
Sbjct: 246 DFPGFSTGPKLDKLGMRGSPTGELIFENCKVPV---ENMLGGYNKGTNNDTDIQSNIL-V 301

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+ +L  A  Y   R   G  +    +M+  +AD+   ++A  +  + +A + DE   
Sbjct: 302 PLMQAALDVAFPYLHARKAFGKPIGTYQLMQGKMADMYTRLSACRSYVYGVARACDEGHF 361

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +++             +  + A  V  +A++C+GG+GYI E +  R  R++    I  G
Sbjct: 362 NNKD-------CAGVILYSAENATQVALDAIQCLGGNGYINEYATGRLLRDAKLYEIGAG 414

Query: 446 SGNAMVLDVLN 456
           +     L +  
Sbjct: 415 TSEIRRLIIGR 425


>gi|239945608|ref|ZP_04697545.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239992077|ref|ZP_04712741.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291449065|ref|ZP_06588455.1| long-chain-acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|291352012|gb|EFE78916.1| long-chain-acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
          Length = 380

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 130/390 (33%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +       D +    AW A    +   GL        +         
Sbjct: 19  AFLAKEVLPYYEQW-----EQDGIVSREAWLA----AGRAGLLGLAVPEEYGGGGSDDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +    A  +  A      +   +      +  + T    + W P   S E          
Sbjct: 70  YSAVLAEEFTRAGAAGLAIGLHNDIIGPYLTGLATDEQKRRWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
                  + +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  I++A+   
Sbjct: 120 ---TITAIAMTEPGAGSDLQGIRTTAEDKGDH-WLLNGSKTFISNGILADLVIVVAKTTP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
             G   +  ++ +    G    R  +KIG +S  T EL F++        L    G    
Sbjct: 176 EGGAKGLSLIVVERGAEGFERGRNLDKIGQKSQDTAELFFNDVRVPKENLLGELDGAFIH 235

Query: 312 MKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        +  A+  ++     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 236 LMTNLAQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                       D       +     + A + K+W  ++   V    ++  GG GY+ E 
Sbjct: 296 TRTF-------LDRCIVDHSDGVLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + +    +I  G+   M   +   L
Sbjct: 349 KVAKAFTDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|189069248|dbj|BAG36280.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 126/375 (33%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         +  ++   GL           +                +     
Sbjct: 73  IPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+  +SD  I++A    E       +   L +  
Sbjct: 180 DLQGIKTNAKKDGSD-WILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F +       LLG+ N     +        L  A +
Sbjct: 239 MKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIADV 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++S       E  +Y ++R   G  +     ++  +A++   I    A         D  
Sbjct: 299 AISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHQLAELKTHICVTRAFV-------DNC 351

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I 
Sbjct: 352 LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|167907901|ref|ZP_02495106.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177]
          Length = 390

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAGH-------------RISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|300771493|ref|ZP_07081368.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761482|gb|EFK58303.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 592

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/459 (18%), Positives = 165/459 (35%), Gaps = 39/459 (8%)

Query: 92  ERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           ER D  +    P+   L+ ++   GL        +    +     +  A         A 
Sbjct: 50  ERIDAQEEGLMPS---LMDKAGELGLLGVSIPEEYGGFGKNFNTSMLVADAVGSGYSFAV 106

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + +      +           + PK+ S E+                  LTE   G+
Sbjct: 107 ALSAHTGIGTLPILYYGNAEQKAKYIPKLASGEWK-------------ASYCLTEPNSGS 153

Query: 210 DIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           D  +  +  +  ++G  Y ++G   W  +   +D FI+ A+++       +   + +   
Sbjct: 154 DANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDK---NLTAFIVEKDF 210

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
            G+     ++K+G + ++T ++ F++    +   L +   G    + IL    +     +
Sbjct: 211 GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILNIGRIKLGAAT 270

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL-------- 376
           +   R  L +AI YA  R      +     ++  IA+ A+ + A  + ++R         
Sbjct: 271 IGSSRGVLTQAIKYANERVQFNLPISKFGAIRYKIAEAAIRLFAVESATYRAGQNIDDAY 330

Query: 377 ----ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A   DEAK++ +      I   I K W  +M   V+ E ++  GG GY  +  + R
Sbjct: 331 DALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSEMLDYVVDEGVQIYGGMGYSADAPMER 390

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE-QLFSTLEQDLGSSGKKVITILRDSI 491
            YR+S  N I  G+     L V+++L K     E  L        G           D  
Sbjct: 391 AYRDSRINRIFEGTNEVNRLLVVDMLLKRAMKGELDLMGPATAVAGELMSIPDFGDEDET 450

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
               E K LA      + +A +A       ++   ++ +
Sbjct: 451 PFAAEKKILANLKKAGLLIAGAAVQKLMMSLSKEQEILM 489


>gi|226308521|ref|YP_002768481.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187638|dbj|BAH35742.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 389

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 138/380 (36%), Gaps = 31/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
            P  + W+K    P      R+    G+        +           +  +     + +
Sbjct: 26  TPHYDDWEKAGHPP--RDFYRKLGDLGIFGMEVPEEYGGAGESSFIWSMVLSEELTRSAV 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G   + +      +    T    + W P   + E                 + +TE  
Sbjct: 84  SFGGSTTHTGLCLGYLLRYATEDQKQRWLPAFATGE-------------TMYAIAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF---LVPRL 261
            G+D+A I +     +DG  Y L+G K F++  + +D  +++ +            +  L
Sbjct: 131 TGSDLAGIRTSATLSADGSHYILNGAKTFITGGVLADRVLVVCRTSPAPSDNRRLGLSIL 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
             D +  G    R  +KIG  ++ T EL FS+       LLG+   +   + D  I   L
Sbjct: 191 SVDTTSEGYQVGRKLDKIGMHASDTAELSFSDVRVPVGDLLGEEGQAFSYLGDNLIRERL 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              + S +    ++  AI Y   R V G  +      K  +A+ A +  AA  L  +   
Sbjct: 251 GIGVESAATAAAAIQFAIDYTTARTVFGSPVSAFQNTKFVLAECAAEQTAAQTLVDKAVE 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            FD  +  + +AA         K +  ++A  V+ + ++  GG GY+ E  IAR Y ++ 
Sbjct: 311 LFDIGELTAADAA-------EVKLFTTEVAARVVDKCLQLHGGYGYMREYPIARLYTDTR 363

Query: 439 ANSILLGSGNAMVLDVLNLL 458
            + I  G+       +   L
Sbjct: 364 VSRIYGGTNEVQKTVIAKAL 383


>gi|156324146|ref|XP_001618465.1| hypothetical protein NEMVEDRAFT_v1g154495 [Nematostella vectensis]
 gi|156199014|gb|EDO26365.1| predicted protein [Nematostella vectensis]
          Length = 269

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
              L +TE  GG+D+A + +   K  D  Y ++G K F+++ + +D +++ A+ +  +G 
Sbjct: 1   IGALCITEPFGGSDVAGMRTTAIKKGD-KYIINGSKTFITNGVYADYYVVAAKTDPELGN 59

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312
             +   L D S  G+   +L +K+G R++ T E+ F N       L+G+       +   
Sbjct: 60  KGISIFLMDSSSKGVSATKL-DKLGWRASDTAEIAFDNVEISQENLMGEEGKGFPYIMQH 118

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L  L  AI + +    ++   I Y  +R   G  +     ++  I + A D+      
Sbjct: 119 FALERLIMAINAHARAEYAIEYTIEYMSQREAFGKTINKFQALRHTIVEHATDVEHCKLF 178

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++      D+ +   +EA  A       K    K+A   I   ++ +GG GY+EE  +AR
Sbjct: 179 NYAAVARLDKGEYVVKEATMA-------KLKSTKVADETIYSCLQMLGGYGYMEEYPLAR 231

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
             R+S    I  G+   +   +  ++
Sbjct: 232 LLRDSRLGPIGGGTSEILKEILSKMI 257


>gi|34763803|ref|ZP_00144716.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC; ELECTRON TRANSFER
           FLAVOPROTEIN ALPHA-SUBUNIT; RUBREDOXIN [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886427|gb|EAA23689.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC; ELECTRON TRANSFER
           FLAVOPROTEIN ALPHA-SUBUNIT; RUBREDOXIN [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 479

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 99/226 (43%), Gaps = 16/226 (7%)

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +++ +++ A     +G   +   + +    G  +    +K+G RS++T +L F+N     
Sbjct: 4   VAETYVVFAVTTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNVKVP- 62

Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
               N+     +  KI +  LD   + ++   + +A+     A+ YA+ R   G  +  Q
Sbjct: 63  --KENLLGKEGDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQ 120

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A  I  A  L +  A   +  +    E+A A+        +   +A  V+
Sbjct: 121 QAISFKLADMATKIRTARFLIYSAAELKEHHEPYGMESAMAKQ-------YASDIALEVV 173

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A++  GG+GY++   + R YR++   +I  G+     + +   L
Sbjct: 174 NDALQIFGGAGYLKGMEVERAYRDAKITTIYEGTNEIQRVVIAAHL 219


>gi|302527301|ref|ZP_07279643.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436196|gb|EFL08012.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 395

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 130/369 (35%), Gaps = 26/369 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 47  DLRTQAAEMGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W  +I S E             V     LTE   G++ A + ++  +  D
Sbjct: 107 GFGTDEQKSEWLERIASGE-------------VVASFALTEPGAGSNPAGLRTKAVRDGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+          +   L      GL       K+G  
Sbjct: 154 DWVLDGQKRFITNAPIADLFVVFARTRPADDSGPGIAVFLVPADTPGLEVGPKDKKMGQE 213

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F+N        + G+ +              +  A ++V   + +L E++ Y
Sbjct: 214 GAWTADVTFNNVRVPGSALVGGNEDDGYRAAMTSLARGRVHIAALAVGSAQRALDESVAY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + D  +++  +AD    + A  AL    A  +   + R       RI   
Sbjct: 274 AASATQGGQPIGDFQLVQAMLADQQTGVMAGRALVRETAARYVSGEDR-------RIGPS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GG+GY+ +  + R YR+     +  G+     L +   L
Sbjct: 327 AAKLYCTEMAGKVADLAVQIHGGTGYMRDVPVERIYRDIRLLRLYEGTSEIQRLIIGGGL 386

Query: 459 EKGTNLFEQ 467
            +     ++
Sbjct: 387 VRQAKKAQK 395


>gi|85709790|ref|ZP_01040855.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1]
 gi|85688500|gb|EAQ28504.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1]
          Length = 593

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 173/486 (35%), Gaps = 59/486 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSI 119
             ++    + + + A      L+      G + +   V     +    +  +  G +   
Sbjct: 48  ADLVEAIVEGVGQFAAGEFAPLNRIGDLEGAKLENGVVRLPDGFAEAYQGYVEQGWNAIA 107

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
                                   A +    L   SV +   +    + +    + P + 
Sbjct: 108 SPTEHGGQGLPFTLACNVLENLGSANMAFSLLPMLSVGAIEALEHHGSDQQKAMYLPDLV 167

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFL 235
           S ++  T             + LTE   G+D+ A+ S  + I++G     Y ++G K ++
Sbjct: 168 SGKWSGT-------------MNLTEPAAGSDVGALRSTAEPITEGEHAGKYRIAGQKIYI 214

Query: 236 SSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKI 279
           +            ++LA++ G       +  F+VP+   +     G  N L    L++K+
Sbjct: 215 TWGDHQLAENIIHLVLARLPGAPEGSRGISLFVVPKYHVNDDGSLGPHNDLRPVSLEHKL 274

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  ++ T  + + +     G L+G  N     +  M     ++     V     +  +AI
Sbjct: 275 GIHASPTCVMSYGDNGECIGELVGQENRGLMAMFTMMNNARINVGNQGVQIGERATQQAI 334

Query: 337 HYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            YA  R  S            +I+ P ++R I  +      A AL +  A   D     +
Sbjct: 335 AYATDRVQSARAGSPDKNPVAIIEHPDVRRMILRMKALTEGARALLYYCAGQVDRGTIGN 394

Query: 388 EEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +A   + I+ P+ K W   +   V    ++  GG G++EE   A+H+R++    I  G+
Sbjct: 395 ADAKNRSEILVPLLKAWGTDIGVEVAGIGVQVHGGMGFVEETGAAQHWRDARIAPIYEGT 454

Query: 447 GNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
                  L    L  +G      LF  + +D G              +L K+   +AR++
Sbjct: 455 NGIQAADLVTRKLGLEGGEAMIALFEEIARDAGDEAG--------LAALAKDCADIARWM 506

Query: 505 TEKIAL 510
            ++ +L
Sbjct: 507 QDEASL 512


>gi|89891515|ref|ZP_01203020.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89516289|gb|EAS18951.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 602

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 155/440 (35%), Gaps = 39/440 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            ++R++   G         ++ +       +        A    A    + +      + 
Sbjct: 65  EVMRKAGEMGFLGIAVPEEYDGLGMGFVSTMLVCDYISGATGSIATAFGAHTGIGTMPIT 124

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + PK+ + E+                  LTE   G+D  +  ++ +   D
Sbjct: 125 LYGTEEQKKKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTKAELTED 171

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G          W  ++   + F++ A++E      +   ++E+   NG+     ++K+G 
Sbjct: 172 GKHYKINGQKMWISNAGFCNVFVVFARLEDDK--NITGFIVENDPSNGISMGEEEHKLGI 229

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEA 335
            S++T ++ F++    L+   N+  G  E  KI +  L+   + ++       R  +  A
Sbjct: 230 HSSSTRQVFFNDC---LVPVENMLAGRGEGFKIAMNALNVGRIKLAAACLDAQRRVITLA 286

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAA--- 391
            +YA  R      +     +++ IA++A +     + S+R A   +     R EE A   
Sbjct: 287 TNYANEREQFKTPIAKFGAIRKKIAEMATNAYVGESASYRAAKDIENRIHLRQEEGATFA 346

Query: 392 --------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                      I   I K    +       E ++  GG G+  +  +   +R++  + I 
Sbjct: 347 EAELKGVEEFAIECSILKVAVSEDMQNCSDEGIQIYGGMGFSADAPMEAAWRDARISRIY 406

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+     +  + +L K               +G+    + +      S    ++     
Sbjct: 407 EGTNEINRMLAVGMLVKKAMKGHVNLLEPAMAVGNELTSIPSFDTPDFSEPLSEEMDMIK 466

Query: 504 LTEKIALASSAAALYRAGMN 523
             +K+ L  + +A+ + G  
Sbjct: 467 KLKKVFLMVAGSAVQKFGPA 486


>gi|76819289|ref|YP_336304.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126445316|ref|YP_001063917.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126456389|ref|YP_001076800.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134278687|ref|ZP_01765401.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|167725018|ref|ZP_02408254.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167743956|ref|ZP_02416730.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167829501|ref|ZP_02460972.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850983|ref|ZP_02476491.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|167916261|ref|ZP_02503352.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|217422116|ref|ZP_03453619.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226197030|ref|ZP_03792608.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242312535|ref|ZP_04811552.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254184585|ref|ZP_04891174.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254185804|ref|ZP_04892322.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194251|ref|ZP_04900683.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|254263739|ref|ZP_04954604.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254300858|ref|ZP_04968302.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|76583762|gb|ABA53236.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|126224807|gb|ABN88312.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126230157|gb|ABN93570.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|134250471|gb|EBA50551.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|157811334|gb|EDO88504.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157933490|gb|EDO89160.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|169651002|gb|EDS83695.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184215177|gb|EDU12158.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|217394347|gb|EEC34366.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225931013|gb|EEH27022.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|242135774|gb|EES22177.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254214741|gb|EET04126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 390

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAG-------------RRISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|254292807|ref|YP_003058830.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041338|gb|ACT58133.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 591

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 96/487 (19%), Positives = 181/487 (37%), Gaps = 64/487 (13%)

Query: 84  LHAYGPGGER-----WDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           L    P G +      D V    P +    +     G     +   F      ++  I  
Sbjct: 52  LSPLNPTGHQNGASLKDGVVTSAPGFADAYKTFAEGGWIGLPFPEEFGGQALPKSLAI-- 109

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           A + ++        ++P +T  S+ AL    T      +  K+ S E+            
Sbjct: 110 AVMEMIQGANPAFGLNPMLTFGSIEALLVKGTDEQKSTYLEKLISGEW------------ 157

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVE 250
               + LTE   G+D+ A+ S+     DG + ++G K F++    D       ++LA+  
Sbjct: 158 -TGAMNLTEASAGSDVGALKSKAIPNDDGSFSITGQKIFITWGEHDVTDNIIQLVLARTP 216

Query: 251 G------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
                   +  FLVP+   +     G  N      L+ KIG  ++ T  +E++   G+L+
Sbjct: 217 DSPEGSRGISLFLVPKFFVNDDGSLGDRNTYQCIGLEEKIGIHASPTCVMEYNGAKGWLI 276

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQ 352
           G+ N     +  M     L   +  V+    ++  A  YAR R             +I  
Sbjct: 277 GEENKGLAAMFIMMNAARLQVGLQGVAVCESAMQAANAYARDRKQGSAPGVQGDAAIIHH 336

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCK 406
           P +KR +  +A    AA A+ +  A + D A+  +++A+ A+       + PI K W   
Sbjct: 337 PDIKRTLVSMAATTQAARAIVYAAAGASDLAEHSTDDASKAKFKQREDLLVPIAKAWATD 396

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-----KG 461
               +  +A++  GG G++ E   A+   ++  N I  G+     +D++          G
Sbjct: 397 RGCEMANQAVQVYGGMGFMNETDAAQIMLDARINPIYEGTNGIQAMDLVGRKLASDKGAG 456

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKI------ALASSA 514
                        D  ++G   + I+ + + +     +    ++   +      ALA + 
Sbjct: 457 MTAMIAEIRKTIADASTTGNGHLAIVANRLYTAAGALEEATEWMLTNMASNRSTALAGAT 516

Query: 515 AALYRAG 521
           A L  AG
Sbjct: 517 AYLRLAG 523


>gi|119717728|ref|YP_924693.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614]
 gi|119538389|gb|ABL83006.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614]
          Length = 399

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 144/407 (35%), Gaps = 36/407 (8%)

Query: 70  AQELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             EL+R        +  +     GP   +WD+    P    ++R+    GL        +
Sbjct: 6   TYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPI--DVVRKMGALGLFGLTAPEEY 63

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSR 181
                          +  + +++    ++         + +    T      W P + S 
Sbjct: 64  GGAGEDGDFTSLCVAIEEIGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDLVSG 123

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                G GLTE   G+D  A  ++   + +G + ++G K F+++  S+
Sbjct: 124 E-------------RLAGFGLTEPGAGSDAGATKTRAV-LENGEWVVNGSKQFITNSGSE 169

Query: 242 ---AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                 + A+      G   +  ++      G   ++  +K+G  ++ T  L   +    
Sbjct: 170 LTSVVTVTARTGTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVP 229

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQ 352
               L            L  LD   ++++ + V   +A       YA  R   GG +  +
Sbjct: 230 EANLLGERGRGYAQF--LATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRK 287

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAV 411
             +   IAD+ + + A+  L++R A   D  +     +    +  A + K +  + A   
Sbjct: 288 QGVAFQIADLEVMLHASRLLTYRAAAMKDSQRDGGGASMKEFKQAAAVAKLYATESAVTA 347

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              A +  GG G++EE  +AR YR++    I  G+     L +   L
Sbjct: 348 TRIATQVFGGYGFMEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGL 394


>gi|224371583|ref|YP_002605747.1| Acd14 [Desulfobacterium autotrophicum HRM2]
 gi|223694300|gb|ACN17583.1| Acd14 [Desulfobacterium autotrophicum HRM2]
          Length = 381

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 141/381 (37%), Gaps = 40/381 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  +K   +P  +  + +    GL    +  ++  +                A +  
Sbjct: 26  PQAEELEKTGKYP--YETMAKMAELGLMGIPFPEAYGGMGSDWVSMHLCIEEISRADITL 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G L+  + +      L   T    + W               P+ +       GLTE   
Sbjct: 84  GALLDVTTSVVGQELLEFGTEEQKQKWL-------------VPIARGHEIGAFGLTEPDA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFLVPRLLED 264
           G+D  A+ ++     D  + L+G K F+++     +   ++ A++EG      +   +  
Sbjct: 131 GSDAGALITEAVSKGDE-WVLNGTKQFITNIGLENASVLLVAARLEGGD----IATFIVP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIM 323
               G        K+  R +AT E+   +     +   N+   P     + L  L++  +
Sbjct: 186 KETPGFKLGTKYEKMAWRGSATHEVILKDCT---IPKENLLGDPKHGFSQHLAVLETGRI 242

Query: 324 SVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S++ + V      L E++ YA  R   G  + +   ++  + D+A+ I  A     + A 
Sbjct: 243 SIAAVAVGAAQACLDESLRYAMGRKQFGKSIFEFQSIQFKLVDMAVAIELARNEYLKAAW 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  K  + E       A   K +  +MA  V ++A++  GG GY+E+  ++R Y+   
Sbjct: 303 LKDHGKKHTFE-------ATCAKLYASEMAEKVASDAVQIHGGYGYMEDSPVSRIYKSVK 355

Query: 439 ANSILLGSGNAMVLDVLNLLE 459
              I+ G+     L +   L 
Sbjct: 356 LLQIVEGTSEVQRLIISRHLR 376


>gi|118469346|ref|YP_888975.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170633|gb|ABK71529.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 387

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 135/378 (35%), Gaps = 31/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAKHDEEHSFP--YEVVAGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGRVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V         ++W P + S                    GLTE  G
Sbjct: 89  AITLEAGVSLGAMPVYRFGNDAQKQEWLPLLASG-------------KALGAFGLTEAGG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLE 263
           G+D  A  +   ++ DG + ++G K F+++  +D      + A   E   G   +  +L 
Sbjct: 136 GSDAGATKTTA-RLDDGHWVINGSKQFITNSGTDITRLVTVTAVTGEKPDGRKEISSILV 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G   +   NK+G  ++ T  L F +        L     G    ++IL    +  
Sbjct: 195 PVPTEGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYANFLRILDEGRIAI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +SV   +  + E++ YA+ R   G  +     +   IA +     AA    +  A   
Sbjct: 255 AALSVGAAQGCVDESVKYAKERQAFGAAIGTYQAIAFKIARMEARAHAARTAYYDAAALM 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K   +        A + K    + A     +A +  GG G++ E S+ARHYR+S   
Sbjct: 315 LAGKPFKKA-------ASVAKLVASEAAMDNARDATQIFGGYGFMNEYSVARHYRDSKIL 367

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+    ++ +   L
Sbjct: 368 EIGEGTTEVQLMLIGREL 385


>gi|215431661|ref|ZP_03429580.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
 gi|289754827|ref|ZP_06514205.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
 gi|289695414|gb|EFD62843.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis EAS054]
          Length = 386

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  + W+K +       L   +   G         +         +          
Sbjct: 29  RHVAPYHDEWEKTKIVDRGVWLE--AGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCA 86

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +         +   A  +  + T    + W P   + E             +   + +T
Sbjct: 87  GRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGE-------------LITAIAMT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+  IT++  K  D  Y L+G K F+++ + SD  I++AQ +   G      L+
Sbjct: 134 EPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
            +    G    R  +KIG  +  T EL F++        L     G +  M+ L    + 
Sbjct: 193 VERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERIA 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            AIM+ +GM   L + + YA+ R   G  +      +  +A++A +      +       
Sbjct: 253 IAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K  +E+AA A+        +  +    +    ++  GG GY+ E  +AR Y +S  
Sbjct: 313 HLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
            +I  G+   M   +   L
Sbjct: 366 QTIYGGTTEIMKEIIGRGL 384


>gi|195015164|ref|XP_001984148.1| GH15160 [Drosophila grimshawi]
 gi|193897630|gb|EDV96496.1| GH15160 [Drosophila grimshawi]
          Length = 578

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 86/465 (18%), Positives = 169/465 (36%), Gaps = 51/465 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             G         +  +        R  ++     L     L +        + L  TP  
Sbjct: 62  ELGGMGIQVPSEYGGLGMNNTQYARLCQIVGAHDLGLGIVLGAHQSIGFKGIMLYGTPEQ 121

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
            + + PK+ S              +V     LTE   G+D  +I S+  K +DG  Y L+
Sbjct: 122 KEKYLPKVASE-------------TVYAAFALTEPSSGSDANSIRSRAVKSADGKHYVLN 168

Query: 230 GHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G K ++S+   ++   + AQ    + + G     V   + + +  G+   + + K+G ++
Sbjct: 169 GSKIWISNGGWAEVMTVFAQTEQLDKKTGQMKDKVTAFIVERAFGGVTSGQPEKKMGIKA 228

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337
           + T E+ F N    +    NV     E  K+ +  L+S    +       M+  +  A  
Sbjct: 229 SNTAEVYFDNVKIPI---ENVLGKEGEGFKVAVNILNSGRFGMGATLSGTMKKCIEIATE 285

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A  R   G  +     ++  +A + +   A  +++F +A + D             +  
Sbjct: 286 HANNRVQFGQKIKTFGTIQEKLARMNILQYATESMAFMIAQNMDSGSQD------YHLET 339

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LN 456
            I+K +  + A  V  EA++ +GG G++ E  + R  R+     I  G+   + L V L+
Sbjct: 340 AISKIYASECAWQVCDEAIQILGGMGFMRETGLERIMRDLRIFRIFEGTNEVLRLFVALS 399

Query: 457 LLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISL---------CKEDKGLARFL 504
            ++   N  ++L   F     +LG   K+       +I L           E +  A+  
Sbjct: 400 GVQYAGNHLKELQRAFKNPAANLGFIFKEASRRATSTIGLGGTDLSANVVPELQESAKKT 459

Query: 505 TEKIALASSAAA--LYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
              I L        + +   N I +  + N   +     + M+  
Sbjct: 460 AACIDLFGKTTEEVIMKYNKNIINEQIILNHLANAAIEIYAMMAT 504


>gi|146278496|ref|YP_001168655.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556737|gb|ABP71350.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 562

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/477 (18%), Positives = 176/477 (36%), Gaps = 42/477 (8%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P  V   L   G+         L R  + +  +L      G     V   P +    R  
Sbjct: 34  PETVEAILTEAGKLC-EEVLAPLQRPGDMHPARLE----NGV----VRTPPGYAEGYRAI 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      D +   +    A       +   A L        +      +    +  +
Sbjct: 85  AEGGWVGIAADPAHGGMGLPMAVTTAVNEMMSAACLSLQLNPLLTQGQIEALEHHASDEL 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ S E+  T             + LTE + G+D+ A+ ++ + + DG + ++G
Sbjct: 145 KALYLPKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLPDGTHAITG 191

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K +++   +D       ++LA++         +  FLVP+ L D     G  N +    
Sbjct: 192 QKIYITWGDTDFNANVCHLVLARLPDAEPGTRGISLFLVPKFLPDADGNPGPRNAVSVVS 251

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           L+ K+G   + T  ++++   G+L+G  +     +  M     L      V     +   
Sbjct: 252 LEEKLGLHGSPTAVMDYAEAKGWLVGAPHKGMAAMFTMMNNARLGVGAQGVGVAEAATQA 311

Query: 335 AIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SEEAA 391
           A+ YA  R   G   +I    ++R +A +  +  +A A++   A + D  ++   SE  A
Sbjct: 312 AVAYAMERRQGGQGTIIGHADVRRMLAVMRAETFSARAIALACAVAIDMGRATGQSEWQA 371

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I  G+     
Sbjct: 372 RAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQA 431

Query: 452 LDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
           +D++   +  G     +L   +E    ++      +  D  +  +  +     L  +
Sbjct: 432 MDLVGRKMMDGGEAAFRLLQEIEDAAETARHTRPELANDVWAATEALREATELLVGQ 488


>gi|299533137|ref|ZP_07046522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718914|gb|EFI59886.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 587

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 93/512 (18%), Positives = 171/512 (33%), Gaps = 72/512 (14%)

Query: 54  VHKELELLGEYVLSCTA---QELARMANYNTPQLHAYGPGGERWD------KVEFHPAWH 104
             ++L+ L  +  +  A   Q L     + +  +      G+         KV   P + 
Sbjct: 20  ADEQLQRLPAHAATDQALMQQVLEEAGKWVSEVVAPLSREGDEVGVQFAAGKVTTPPGFA 79

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
              +     G                          +L A      +    +  A   + 
Sbjct: 80  QAYQDFWQAGWPALACAEEDGGHGLPWV-LEGVLYEWLSAANHGWTMAPGLLHGAYECLK 138

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS- 222
              +  +   + PK+ S E+                + LTE   G+D+  + +Q   +  
Sbjct: 139 HHGSDALKAAYLPKVASGEW-------------LATMCLTEAHAGSDLGQVRTQAVPVGE 185

Query: 223 ---DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPN 268
                 + +SG K F+S    D       ++LA++ G       +  FLVP+LL  G  N
Sbjct: 186 SEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGAPAGPKGLSLFLVPKLLPGGERN 245

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +  +R++ K+G   + T  + F    G+L+G        +  M     L  A+  +  +
Sbjct: 246 RVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGLNAMFVMMNAARLHVALQGIGLL 305

Query: 329 RVSLAEAIHYARRRHVSGGI---------------LIDQPVMKRAIADIALDIAAATALS 373
             +  +A  YA  R                     +I+ P ++R +      +     L+
Sbjct: 306 DAAWQKAHAYALERRQMRAPGAVPASRGTGDAADLIIEHPAIRRTLDLQRAWVDGGRVLA 365

Query: 374 F------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           +       +A   + A+ R +   +  ++ P+ K    + A    +  ++  GG GYI E
Sbjct: 366 YQTGIYLDVARDAESAREREQAQQWCSLITPVLKAAWTQQAFEGASACLQVFGGHGYIRE 425

Query: 428 RSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
             I +  R+S    I  G+       L V  +L  G     Q   TL   L +       
Sbjct: 426 WGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQAMGQWLLTLRNSLDAGRALDAE 485

Query: 486 ILRDSISL----------CKEDKGLARFLTEK 507
           +LR    L          CKED  LA  + + 
Sbjct: 486 VLRCLAQLRYFTTVLAQACKEDDTLAWRVADD 517


>gi|145224946|ref|YP_001135624.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315445277|ref|YP_004078156.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217432|gb|ABP46836.1| Butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315263580|gb|ADU00322.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 397

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 130/383 (33%), Gaps = 35/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  +  + +P   A++      GL   +    +  +                  +  
Sbjct: 31  PTAQELEHADTYP--QAIVDAMREMGLFGLMIPEEYGGLGESLLTYALCVEELARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T      + P++ + E                   ++E   G
Sbjct: 89  SGVINTHFIVAYMIRQHGTDAQKSHYLPRMATGE-------------TRGAFSMSEPELG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE--GRVGCFLVPRLLEDG 265
           +D+AAI ++ +   DG Y + G K +L++  S   +  L + +         +   L + 
Sbjct: 136 SDVAAIRTRAKNNGDGTYTIDGQKMWLTNGGSSTLVATLVRTDEGADKPHRNLTAFLIEK 195

Query: 266 SP------NGLCYQRLKNKIGNRSNATVELEFS----NTFGFLLGDLNVSTGPVEDMKIL 315
                    GL      +K+G +   T EL F     +    L          + D   +
Sbjct: 196 PTGFGEVAPGLTIPGKLDKLGYKGIDTTELIFDGYRADAGDILGEAPGQGFFQMMDGVEV 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ +  +      +   A+ YA++R   G  + +   +   +A++A  + AA  +   
Sbjct: 256 GRVNVSARACGVGIRAFELAVKYAQQRSTFGKPIAEHQAIAFQLAEMATKVEAAHLMMVN 315

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +     A  A       KY+  ++   V  ++    GG GY +E  I R  R
Sbjct: 316 AARHKDSGERNDVAAGMA-------KYFASEVCAEVTQQSFRIHGGYGYSKEYEIERLMR 368

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++P   I  G+       +   L
Sbjct: 369 DAPFLLIGEGTSEIQKNIISKRL 391


>gi|126459925|ref|YP_001056203.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126249646|gb|ABO08737.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 540

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 105/511 (20%), Positives = 203/511 (39%), Gaps = 40/511 (7%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           G N Y  D  L   +        ++L  LG+YV +   +    + +Y  P L  +   G 
Sbjct: 10  GKNYYDDDKPLQLFLRYIGFEGDEDLSHLGQYVSTKMMEVAYVVDHYARPVLKRWSVRGR 69

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             + V+  P     +R+ +  G+            +  Q         Y+++       +
Sbjct: 70  EINYVQVAPEHFEAVRQLLKYGVVSKP--------LLNQDLLYHFVSGYVISDAGFFCTI 121

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +A  +A          + P  F  E           +        TE + G+D+ 
Sbjct: 122 TVTEQTAYGLAKYGDEEAKAYYLPNFFKSE-----------SPWLGATFYTEVQAGSDLG 170

Query: 213 AITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLV-----PRLLEDG 265
           +  +   +  +  + L G K+F S+  ++DA I+ A+    R G   V     P    DG
Sbjct: 171 STEAVAYQEGERRWRLRGIKYFTSNVGLADAAIITAKPHPPRPGAKGVAAFFAPAYRPDG 230

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            PN     RLK+K+G  +  T E+E  +T   LLG ++       ++  +  +D++   +
Sbjct: 231 EPN-WRILRLKDKLGTVTVPTGEVELVDTVAHLLGTVDTGIYIALEILTIARIDNSTAGL 289

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-- 383
              R +L EA  Y + R   G  L++ P+  R + ++   + A   L+ + A  F +A  
Sbjct: 290 GLARKALWEAYLYGQERRAFGKRLVEHPLYIRDLVEMEAKLEATLLLTLKAAKLFSDASR 349

Query: 384 --KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +    YAR++  I K     ++  V   +ME +GG G++EE  +A+ +R++   S
Sbjct: 350 ERPPYTPSYHYARLLTHIVKNMAAWVSIDVTRYSMELLGGIGFLEEFPLAKLHRDALVTS 409

Query: 442 ILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQDLGSSGK----KVITILRDSISLC 494
           I  G+ N   LD+     +   G    E++ + + +  G   +      +   RD ++  
Sbjct: 410 IWEGTSNIQSLDMAEAFFRKDAGRAYVEEVSTEISKIGGQEARQKLSAALAQARDEVAYA 469

Query: 495 KED--KGLARFLTEKIALASSAAALYRAGMN 523
             D  +  ++ L   +    +AA   R   +
Sbjct: 470 LNDGVEFHSKRLLSTLGTLYAAALFQRWAED 500


>gi|238021517|ref|ZP_04601943.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147]
 gi|237868497|gb|EEP69503.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147]
          Length = 595

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 94/499 (18%), Positives = 179/499 (35%), Gaps = 48/499 (9%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYG 88
               +N        +A +   P+    EL+      ++    E A+ A  +         
Sbjct: 6   PLNELNFALRTHGKLADVLQLPAAQELELD---ADTVAAVLDEAAKFAEQSWAHTNRTGD 62

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +    KV  H    A  R+    G         F               ++  A L
Sbjct: 63  VHGVKLADGKVHTHADLAAAYRQFCEAGWAGLRAPAEFGGQGLPAVVSAACEEMWCAANL 122

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L   ++ +   +    +      + PK+ + ++  T             + L+E  
Sbjct: 123 SLSLLPMLTLGAIDAIRKHGSAEQQAAYLPKMCAGQWSGT-------------MNLSEPN 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            G+D+A + +Q     +G Y ++G K F++    +       ++LA++         +  
Sbjct: 170 AGSDLAHVATQAAPDGNGAYRITGQKIFITWGEQELTENIVHLVLARLPDAAAGVQGISL 229

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F+VP+ L +     G+ N +    L++K+G  ++ T  ++F    G+L+G        + 
Sbjct: 230 FIVPKFLLNADGSLGARNAVHAVGLEHKLGIHASPTCTMQFDGATGYLVGRAGKGLAYMF 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GG--ILIDQPVMKRAIADIALD 365
            M     L+  I   +    +   A  YA  R      G    +I  P ++R +A     
Sbjct: 290 TMMKAARLNVGIEGHAVAERAYQNARAYAAERVQGAIDGRDVAIIAHPDVRRMLAVQKAT 349

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECI 419
           +AA  AL  R A  FD A+  ++  A            PI K W       +   A++  
Sbjct: 350 LAAQRALYLRAAALFDLAEGLADNVARKQAERELDFFIPIIKAWLTDNGVLLTNLAIQIY 409

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLEQDLG 477
           GG+GY+EE  +A+  R+     I  G+      D+      G    L  +L +  +    
Sbjct: 410 GGAGYVEESGVAQLMRDVRITPIYEGTNGIQAADLAGRKTTGNQGALPLKLLAEGKTLAD 469

Query: 478 SSGKKVITILRDSISLCKE 496
           +    +   LR +I+L ++
Sbjct: 470 ALAPTLAHALRQAIALAEQ 488


>gi|149917987|ref|ZP_01906481.1| acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
 gi|149821253|gb|EDM80657.1| acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1]
          Length = 387

 Score =  240 bits (614), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 134/377 (35%), Gaps = 23/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E W++    PA H + +     GL    +           ++ I       MA
Sbjct: 20  KHINPRVEEWEQAGAFPA-HEVFKLFGEQGLLGLKYPEEHGGAGLDYSYTI------AMA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +  A         +  +   M TP + +       S E       P     +   +G++E
Sbjct: 73  EELANIDCGGVPLAIGVQTDMCTPALARFG-----SAELRKEFLEPSIAGDLVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLE 263
              G+D+A+  +  ++  D      G  W  +   +D    L    EG         ++ 
Sbjct: 128 VGAGSDVASTKTHARRDGDDFVINGGKMWITNGFQADWMCTLVNTVEGVAPHKSKSLVII 187

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G+      +K+G R++ T ++ F +        +     G V  M       L  
Sbjct: 188 PMDAKGVDRSTKLDKLGMRASDTAQIFFEDVRVPQRYVIGQEGFGFVYQMMQFQEERLWG 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV  +   L   + Y R+R   G  ++D   +   +A++  ++ A  AL +R    +
Sbjct: 248 AANSVRSIERMLEMTVEYTRQRKAFGQSILDNQWVHFKLAELETELEALRALVYRATELY 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K  ++       +A + K    ++   V    ++  GG GY+ E  I R YR++   
Sbjct: 308 VSGKDVTK-------LASMCKLKSGRLCREVGDWCVQFHGGMGYMMETPINRAYRDARLV 360

Query: 441 SILLGSGNAMVLDVLNL 457
           +I  G+   M+  +  L
Sbjct: 361 AIGGGADEIMMGIIAKL 377


>gi|241763038|ref|ZP_04761099.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367821|gb|EER62053.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 377

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 134/371 (36%), Gaps = 29/371 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P        S+  GL    +  S          +       L     +
Sbjct: 26  PYAAAVDREKRPPI--EAFEASLALGLPGLPYPESLGGQDGDMLSQCIMIE-ELSRVCAS 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   S      V    T    ++  P+I   E                  GLTE +GG
Sbjct: 83  TALTVSSCWILMAVMDYGTEAQQREIVPQITRGE-------------ARCAWGLTEPKGG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+   T++  +   G       ++  +   ++ +++ A+   +   F +   L   +  
Sbjct: 130 SDLMGATTRAVRDGSGWVLDGTKRFITNGGWAEWYLIFARTTEKR--FGL--FLVHKNDP 185

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ +   + K+G R + T ++           LLGD       +    +   L  A  ++
Sbjct: 186 GVSFGAPERKMGMRGSPTSDVILDAVKLPADRLLGDPERGAEYITQALLRSRLHIASHAL 245

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                +L E + Y   R   G  +    +++  +AD+A+ + +A A   R  + +     
Sbjct: 246 GIAAGALEETLRYTGEREQFGKPIARFQMVRSMVADMAIRVESARATLHRAVSLYQAGDP 305

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +      A+++A I K  C   A AV  +A++  GG GY+E+ ++ R  R++    I  G
Sbjct: 306 Q------AKMLASIAKVLCSDAAMAVTTDAVQLHGGYGYLEDYAVERMMRDAKVTQIWEG 359

Query: 446 SGNAMVLDVLN 456
           +     L +  
Sbjct: 360 TNQIQRLMIAK 370


>gi|162455189|ref|YP_001617556.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161165771|emb|CAN97076.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 389

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 151/379 (39%), Gaps = 26/379 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL---MAQ 145
           P  E W+  E  P+W  + +R+   G+  + +                 A   +   MA 
Sbjct: 26  PHVEEWESSECFPSW--VFKRAGELGILGAHFPEEHGGAGLDYWFSAAKAEELVRCTMAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +    L+  S  +  +++ + T    +++               P         LG++E 
Sbjct: 84  VS-MGLLVQSDMATPVISDIGTKEQIEEFLK-------------PALAGDKIAALGVSEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLED 264
             G+D+A I +  +K  D  Y L+G K F+++     F+ +LA+     G       L  
Sbjct: 130 AAGSDVAGIRTIARKEGDD-YVLNGQKTFITNGTRADFVTLLAKTSPDKGAHGCSFFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
            +  G    +   KIGN+S+ T EL   +      +LLG+ +     +        L +A
Sbjct: 189 TALRGFNVAKKLKKIGNKSSDTAELFLEDVRVPGRYLLGEPDQGFAYLMQNFQTERLVAA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF- 380
           + +++   ++L   + Y R R   G  +I +   +  + D+     AA A +++  + + 
Sbjct: 249 VSAIASSFMTLDGTVEYGRERVAFGKPIIKRESWQHKLVDLYTRCEAARAFAYKCVDHYN 308

Query: 381 DEAKSRSEEAAYAR-IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           DE   R    ++    +  + K     +A  V+   ++  GG GYIE+  IAR +R+   
Sbjct: 309 DERYVRKVPISFDTVKLISMAKILAGDVANDVVDTCLQFHGGWGYIEDFPIARAWRDQRL 368

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M   +  L+
Sbjct: 369 LRIGGGTTETMKYYLAKLM 387


>gi|50085334|ref|YP_046844.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           sp. ADP1]
 gi|49531310|emb|CAG69022.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter
           sp. ADP1]
          Length = 381

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 77/392 (19%), Positives = 135/392 (34%), Gaps = 37/392 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQA 132
           +L  +    +R+ K    P +    R  I           +G  C      +        
Sbjct: 7   ELELFRDNFKRYLKEHIAPHYEQWEREGIMPRSVWNSLGENGFLCVDMPEEYGGYGVPTY 66

Query: 133 HKIRAARLYLMAQLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           + +        A   A    +   S  +A  +  + T +  + W  K+ + E        
Sbjct: 67  YSLMLVEESARAGYGALSTAISCHSEIAAPYILHIGTEQQKQHWLSKMVTGE-------- 118

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QV 249
                V   +G+TE   G+D+ A+ +      D  Y L+G K F+S+      ++LA + 
Sbjct: 119 -----VVGAIGMTEPGAGSDLQAMRTSAILQDDH-YVLNGSKTFISNGQHADLVVLAVKT 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           + +     V  +L D   +G       +KIG  S  T EL F +       LLG      
Sbjct: 173 DPQARAKGVSLMLVDTHLDGFKKGTNLDKIGLHSQDTSELFFDHVKVPKDQLLGQAGQGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +           A  ++  +R ++  A  Y + R   G  +      +  +A   +D 
Sbjct: 233 AYLMQELPRERTAIAATALGAIRGAIDVATAYIQERQAFGQAIASFQNTRFVMAQAKIDE 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            A  A   R  + + E K   E AA         K +   M   V    ++  GG GY+ 
Sbjct: 293 LATAAFYERNVSLYQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMT 345

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I+R + ++    I  G+   M   V   +
Sbjct: 346 EYPISRFFVDARIQRIYGGTNEIMKEIVARGI 377


>gi|284030163|ref|YP_003380094.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283809456|gb|ADB31295.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 381

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 139/356 (39%), Gaps = 29/356 (8%)

Query: 110 SIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMT 166
           +   G         +    V         A     + A L +   +     +  +V L  
Sbjct: 46  AGKQGFLGLDVPEQYGGSSVGDYRFNAVFAEELSKISASLSSCFGIHYDCAAPYLVDL-G 104

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W PK  S E             +   +G+TE  GG+D+A + +  +K+ DG +
Sbjct: 105 TEEQKQRWLPKFCSGE-------------LIAAIGMTEPSGGSDLAGLRTSAKKV-DGGW 150

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  M+D  I   + +   G   +     +   +G    R  +K+G   + 
Sbjct: 151 VLNGSKTFITNGDMADLTITAVRTDPSKGAKGITLFAVEQGMHGFARGRKLDKVGQTESG 210

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F + F     +LG+++     + +      + +A+ +++     LAE I Y ++R
Sbjct: 211 TSELFFEDVFVPEENVLGEVDRGFIHMMERLAQERVGAAVSNIAHATQILAETIEYVKQR 270

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      K  IA++        A       + DE +  + +AA A+        
Sbjct: 271 KAFGQPVGSFQYNKFLIAELVTKAEVTQAYVDNAIVAHDEDRLTAVDAAKAKW------- 323

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  ++   ++   ++  GG GY+ E  +AR +R++    I  GS   M   +   L
Sbjct: 324 WSAQVQNEILDACVQLHGGYGYMNEYRVARAWRDARVTKIWAGSNEIMKELIGRDL 379


>gi|195126955|ref|XP_002007934.1| GI12099 [Drosophila mojavensis]
 gi|193919543|gb|EDW18410.1| GI12099 [Drosophila mojavensis]
          Length = 581

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/473 (18%), Positives = 169/473 (35%), Gaps = 53/473 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
             L      G         +  +        R  ++     L     L +        + 
Sbjct: 58  KTLDALWELGGMAIQVPSEYGGLGMNNTQYARLCQIVGANDLGLGITLGAHQSIGFKGIL 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  TP     + PK+ S               V     LTE   G+D  +I S+  K +D
Sbjct: 118 LYGTPEQKAKYLPKVASE-------------QVYAAFALTEPSSGSDANSIRSRAVKTAD 164

Query: 224 -GIYCLSGHKWFLSSPM-SDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRL 275
              Y L+G K ++S+   +D   + AQ E      G      V   + + S  G+     
Sbjct: 165 NKYYILNGSKIWISNGGLADVMTVFAQTEQIDQKTGEKKDK-VTAFIVERSFGGVTNGAP 223

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MR 329
           + K+G +++ T E+ F +    +    NV     E  K+ +  L+S    +       M+
Sbjct: 224 EKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGEGFKVAVNILNSGRFGMGATLSGTMK 280

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             +  A  +A  R   G  + +   ++  + ++ +   A  +++F ++ + D        
Sbjct: 281 KCIEIATAHANNRTQFGQKIKEFGTIQEKLVNMNILQYATESMAFMISQNMDSGSQD--- 337

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                +   I+K +  + A  V  EA++ +GG G+++E  + R  R+     I  G+   
Sbjct: 338 ---YHLETAISKVYASECAWYVADEAIQILGGMGFMKETGLERIMRDLRIFRIFEGTNEV 394

Query: 450 MVLDV-LNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISL---------CKE 496
           + L V L+ ++   N  ++L   L+    +LG   K+        I L           E
Sbjct: 395 LRLFVALSGVQYAGNHLKELQRALKNPSANLGFIFKEASRRATSRIGLGGVDLSAFVVPE 454

Query: 497 DKGLARFLTEKIALAS--SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
            +  A+     I L    +   L +   N I +  + N   ++    + M+  
Sbjct: 455 LQESAKKAASCIDLFGRTTEEVLMKYNKNIINEQIVLNHLANSAIDIYAMIAT 507


>gi|33597649|ref|NP_885292.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574077|emb|CAE38401.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 608

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 82/444 (18%), Positives = 157/444 (35%), Gaps = 64/444 (14%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V   P +          G       + +      +     A      A L        +
Sbjct: 70  QVTTTPGFSQGFADYTAGGWQGLQHPQKWGGQGLPKVVAAPAGENIQAASLAFSLCPMLT 129

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +  + +    + + PK+   ++  T             + LTE + G+D+A + 
Sbjct: 130 DGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGSDLAQVA 176

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++  +  DG Y LSG K F++    D       ++LA+          +  F+VP+ L +
Sbjct: 177 TRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKGISLFIVPKYLVN 236

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEF--------SNTFGFLLGDLNVSTGPVED 311
                G  N +    L++K+G   + T  L +            G+L+G+ N     +  
Sbjct: 237 EDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFI 296

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIA 363
           M            +     +   A  YAR R     I        +   P ++R +  + 
Sbjct: 297 MMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAHHPDVQRMLLTMR 356

Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                A A+S+  A + D      +A+ R+   A+   + PI K +  + A  V +  ++
Sbjct: 357 ALTEGARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG G+IEE   A+HYR++    I  G+      D++                  +D G
Sbjct: 417 VHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLVG-------------RKTLRDGG 463

Query: 478 SSGKKVITILRDSISLCKEDKGLA 501
           ++    I  +RD++     +   A
Sbjct: 464 ATAHASIAAMRDTLKAVAAEAQRA 487


>gi|319787232|ref|YP_004146707.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465744|gb|ADV27476.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 385

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 135/381 (35%), Gaps = 28/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     P    L  +    GL     D  +        AH +    +   +   
Sbjct: 27  PRAAQIDHDNAFP--QDLWPKLGELGLLGMTVDPEYGGSGMGYLAHLVAMEEISRASGSV 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    S + L       + + P++ + E+                L ++E   
Sbjct: 85  GLSYGAHSNLCVSNLFLNGNEEQRRKYLPRLCTGEWKG-------------ALAMSEPGA 131

Query: 208 GTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
           G+D+  ++    +             W  + P +D  ++  +  G   G   +   + + 
Sbjct: 132 GSDVVGSMRCSAELRDGVWIANGNKMWITNGPEADVLLVYMRTAGKEAGSRCMTAFIVER 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G    +  +K+G R + T EL F N       +LG++N     +        L    
Sbjct: 192 GMRGFSTAQKLDKLGMRGSNTCELVFDNCEIPQENVLGEVNQGVRVLMSGLDTERLVLTG 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+ +L  A+ Y R R      +    +M+  IAD+   + ++ A ++++A  FDE
Sbjct: 252 GPIGLMQSALDIALPYVRERKQFDAAIGTFGLMQGKIADMYTALQSSRAFAYQVARDFDE 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     AA   + A        + A  V  E ++ +GG+GYI E    R  R++   +I
Sbjct: 312 GRRSRAAAAGCLLHA-------SEAAVQVALEGIQALGGNGYINEYPAGRILRDAKLYAI 364

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+     + +   L +G  
Sbjct: 365 GAGTNEIRRMLIGRELFEGRG 385


>gi|146284190|ref|YP_001174343.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145572395|gb|ABP81501.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 600

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 170/498 (34%), Gaps = 61/498 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   I  G H +        +             +  A +        S+ ++ 
Sbjct: 76  PEVKPAVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPMLSMGASH 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +               PM +      + LTE   G+ ++ I ++ + 
Sbjct: 136 LIETFGSEEQKRRFL-------------QPMLEGRFFGTMALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
             DG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F    N  G+L+G+ +     +  M     +   
Sbjct: 243 GERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
           + ++         +++YAR R       G         +I+   +KR +      +  A 
Sbjct: 303 MGAIMLGYAGYLYSLNYARERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A   D+       ++R   A    ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L   L++       QL   ++     + + 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAAEY 482

Query: 482 ----KVITILRDSISLCK--EDKGLARFLTEKI--ALASSAAALYRAGMNDIADVFLENR 533
                +   L   ++         L   +  K+  ALA+SA  L   G   I   +LE  
Sbjct: 483 DSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLEQA 542

Query: 534 FLDNCHSTHCMLHGRFNA 551
                           + 
Sbjct: 543 LRAERGLAEGN-PADADF 559


>gi|304310713|ref|YP_003810311.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796446|emb|CBL44654.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 389

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 140/396 (35%), Gaps = 21/396 (5%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +EL R             P  E W++    PA H L ++    GL        +  
Sbjct: 4   TQEHEELRRTVRNFVE--KEINPHVEEWEENGPFPA-HELFKKMGDLGLLGVTKPEKYGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +    ++ +  A        E G +    V  A  V           +  +    EY   
Sbjct: 61  MGLDYSYGLVVAE-------ELGAIRCGGVPLAIGVQTDMATPALARFGSEALCNEY--- 110

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P  K      + ++E   G+D+AAI ++ +K            W  +S  +D F +L
Sbjct: 111 -LVPALKGEYVASIAVSEPAAGSDVAAIKTRAEKKDGDYVINGTKMWITNSTQADWFCLL 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
           A             ++      G+   +  NK+G RS+ T ++ F N        + +  
Sbjct: 170 ANTSEGSKHKNKSMIIVPRDAKGIEVSKPLNKLGMRSSDTAQVFFDNVHVPQRNLVGMEG 229

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G +  M       +  A  +  GM   + E I Y R+R   G  LI+   +    A++ 
Sbjct: 230 AGFMMQMMQFQEERMWGAANAYGGMNGLIQETIAYTRQRETFGQPLINNQSIHFRFAELQ 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ A  AL +     +    + ++       +A + K    ++   +    ++  GG G
Sbjct: 290 TEVEALRALIYHTCELYISNGNPTK----TLQLASMCKLKAGRLVREISDSCLQYWGGMG 345

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           ++ +   AR  R+    SI  G+   M+  +   ++
Sbjct: 346 FMWDNVAARSLRDGRLASIGGGADEIMLGIICKTMD 381


>gi|167720412|ref|ZP_02403648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
          Length = 406

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 103/401 (25%), Positives = 177/401 (44%), Gaps = 33/401 (8%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVV-----HKELELLGEYVLSCTAQELARMANYNTPQ 83
           P   G+N ++SD    AL+              EL  LG    S     LA  A+ N P 
Sbjct: 21  PDSRGINFFTSDPDCAALLRLHLGEARFRGFEPELRALGLRA-SDELDRLASRADRNPPV 79

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L      GE  + ++ HP +  L R +       ++  R   P        ++ A  +L 
Sbjct: 80  LQPRTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPP-----LVKYALTFLF 134

Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            Q E G     S+T +    L    +  + + + P++ SR++D   +  M          
Sbjct: 135 VQAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF--------- 185

Query: 202 LTEKRGGTDIAAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------ 251
           +TE+  G+D+  I ++  +         + L G KWF S+  +D  ++LA+ EG      
Sbjct: 186 MTEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVK 245

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            +  FL+P+ L DGS N     RLK+K+G+RS A+ E+       +L+G++      + D
Sbjct: 246 GLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMAD 305

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           M  +  L + + +   MR +  EA+H AR R   G  LID P+M+R +  + +    A +
Sbjct: 306 MINMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARS 365

Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAV 411
           L  ++A    +A +  ++     RI+ P+ K+  C+ A  V
Sbjct: 366 LFMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRV 406


>gi|33595598|ref|NP_883241.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565676|emb|CAE40324.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 597

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 145/403 (35%), Gaps = 48/403 (11%)

Query: 88  GPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G R +  +V     +    R     G                         +     
Sbjct: 64  DRAGCRLEGHEVRTPAGFVEAYRAYAEGGWSGLCASPDHGDQGLPTVASAIVGEMLGATN 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +        S  +   +    +  +   +AP++ S E+  T             + LTE 
Sbjct: 124 ISFALYPRLSEGAYRCIRANASAALQAIYAPRLASGEWTGT-------------MCLTES 170

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVG 254
           + GTD+  + ++ +   DG Y +SG K F+SS   D       ++LA++         + 
Sbjct: 171 QAGTDLGLLRTRAEPDGDGAYRISGSKMFISSGEHDLASNIVHMVLARLPDAPAGTRGIS 230

Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
            F+VP+ L D     G  NG+    +++K+G  +NAT  L F N  G+L+G+ N     +
Sbjct: 231 LFVVPKRLPDAQGEPGERNGVYCDAIEHKLGLHANATCVLRFENARGYLVGEPNKGLAAM 290

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRA 358
             M     L +   ++     +L +++ YA  R  S              +I QP ++R 
Sbjct: 291 FVMMNSARLGTGAQALGLTETALQKSLAYAAERLQSRAPGHEKAITRADPIILQPDVRRM 350

Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           +         A    + LA   D      +   R        ++ P+ K +    A   +
Sbjct: 351 LLTQQAWAQGARMFLYWLALQIDTELHAADPAERDRAGGLLSLLTPVAKAFVSDNAVESV 410

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             A++  GGSGYI E  I +  R+     I  G+      D+L
Sbjct: 411 NLAVQVHGGSGYIVESGIEKTLRDVRILPIYEGTNGVQAHDLL 453


>gi|21221225|ref|NP_627004.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|7544038|emb|CAB87211.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 385

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 133/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F       +HK  A      A+       S      +   
Sbjct: 40  REFYYKLGELGIFGINVPEEFGGAGMD-SHKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  + E                 + +TE   G+D+A + S  +  
Sbjct: 99  INMLATDEQKKRYLPKFVTGEEM-------------WAIAMTEPGTGSDLAGMKSTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+ +          +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTDAPTAEDRRHGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAKQYVQDRTVFGKPVAHFQNTKFELAACQAEVDAAEAVVDRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKNM 383


>gi|254383446|ref|ZP_04998797.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194342342|gb|EDX23308.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 383

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 139/380 (36%), Gaps = 27/380 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P    WD+ ++ P    ++RR+   GL               +A  +          
Sbjct: 25  HLAPHAVAWDRDKYFPV--DVIRRAAALGLGGVYVREEQGGSGLTRADGVLVFETLATGC 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S     A M+         + W P + +                     LTE 
Sbjct: 83  PSIAGYLSIHNMVAWMIDRYGDAAQRRRWLPGLCT-------------ADTLGSYCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLED 264
             G+D  A+ ++ ++  D  Y L+G K F+S   +   +I++A+  G  G   +   + +
Sbjct: 130 GAGSDAGALRTRAERDGDH-YVLTGVKQFISGAGAAGVYIVMART-GEAGPRGISAFVVE 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+ +   + K+G  +  T ++            LG          +      L  A
Sbjct: 188 RDDPGVSFGANEQKMGWNAQPTRQVVLDGVRLPADRRLGAEGEGFRIAMNGLNGGRLGIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L  ++ +   R   G  L+D   ++  +AD+A ++AAA AL    A + D
Sbjct: 248 ACSLGGAQSALDRSLSHLADRAAFGARLLDAQALQFRLADMATELAAARALLRTAAEALD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               ++ E      +  + K +       V  EA++  GG GY+ E  I +  R+   + 
Sbjct: 308 AGDPKAAE------LCAMAKRFATDTGFTVANEALQLHGGYGYLSEYGIEKIVRDLRVHQ 361

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           IL G+   M + V   L + 
Sbjct: 362 ILEGTNEIMRVIVARGLTEA 381


>gi|226364143|ref|YP_002781925.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242632|dbj|BAH52980.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 134/376 (35%), Gaps = 29/376 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H   PG    D+    PA   L++R     L        F  +      ++ A       
Sbjct: 21  HEIHPGAAFRDETREFPA--ELVKRLGEQDLMGISVPEEFGGLGLSTKTQLIAIEEIART 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 + +        + +  T    + W P + S E             +  G  LTE
Sbjct: 79  DAALASIYTAHYLGLEPILVGGTQEQKRRWLPGLASGE-------------LLAGFALTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+DIA++ +  ++  DG +      +  ++  +D  ++ A+ +   G   +   +  
Sbjct: 126 PDAGSDIASMRTTARREDDGWHLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVLP 185

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G+ Y   ++K+G RS  T  +   +    L  D  V T        L  L+ A + 
Sbjct: 186 QGTPGVSYSEPQDKLGIRSAPTYTVYLDDV--VLPHDAVVGTEGRGGNIALTALNRARID 243

Query: 325 VSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+ M   +A         YA  R   G  + +   ++  +      + ++   +   A+ 
Sbjct: 244 VAAMANGIALRAWELGRSYAAERKQFGHPIAEFQAIQLLLGACDAQLVSSRVTADWAADV 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D         A  R  A ++KY   +   +++ + ++  GG+G++ E  I R YR+   
Sbjct: 304 KDTG-------ADLRRAASVSKYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRI 356

Query: 440 NSILLGSGNAMVLDVL 455
             I  G+    +L + 
Sbjct: 357 LRIFEGTSQIQLLTIA 372


>gi|134292556|ref|YP_001116292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135713|gb|ABO56827.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 586

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 98/513 (19%), Positives = 184/513 (35%), Gaps = 64/513 (12%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERWD--KVEFHP 101
           AL    P     ++      V      E AR  A    P   +    G R+D   V    
Sbjct: 24  ALWRRVPDWADLDVS-----VAEQVLDEAARFVAERIAPLDASGDVEGCRFDGADVTMPA 78

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R  +  G      D +         H +  A   ++A      LMSP +T  ++
Sbjct: 79  GFRDAYRDYVAAGWPTLALDPACGGQGLP--HLLDVALQEMLAGANHAWLMSPGLTHGAV 136

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             V+     RV +D  PKI S  +                + +TE + G+D+  + ++  
Sbjct: 137 ACVSAHGCARVKRDILPKIASGAW-------------LTTMCITEPQAGSDLGLLRTRAA 183

Query: 220 KI--SDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLEDGS----- 266
                DG Y +SG K F++    D       ++LA+  +   G   +   +         
Sbjct: 184 PDPTGDG-YRISGSKLFITGGDHDLTENIVHLVLARLPDAPAGTKGLSLFVVPKWLDAAG 242

Query: 267 ---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
               NG+    +++K+G +++ T  + F    G+L+GD +     +  M     L  A+ 
Sbjct: 243 GRVRNGIWCDGIEHKMGLKASPTCTMRFDAALGWLVGDAHRGLAAMFVMMNAARLQVAMQ 302

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            V     +   A  YA  R       +   P ++R + D    +    A+ + +A+  D 
Sbjct: 303 GVGHAHSAWQAASAYAGERVQGRAASIAQHPAIRRILLDARATVEGERAIGYWIAHWLDV 362

Query: 383 AKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A    + +A       A ++ P+ K +      A  + A++  GG GY+ E  I +  R+
Sbjct: 363 AAHDPDASARDAATKLASLLTPVAKAFFTANGFATASNALQVFGGYGYVHEYGIEQTLRD 422

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
              + +  G+     +D+             L   +  D G +   ++  +R   + C +
Sbjct: 423 CRVSMLYEGTNEIQAIDL-------------LVRKVLGDRGDALGALLARIRAEAAACSD 469

Query: 497 DKG--LARFLTEKIALASSAAALYRAGMNDIAD 527
                L R    ++A   +      A + D +D
Sbjct: 470 APADPLTRAAGTRVAALCAEVERVSAALLDASD 502


>gi|213971499|ref|ZP_03399611.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301385793|ref|ZP_07234211.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302062906|ref|ZP_07254447.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302133683|ref|ZP_07259673.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213923781|gb|EEB57364.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 600

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 93/505 (18%), Positives = 177/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            +    P     +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYEH--------GEAILIPEVKPAVDAFIAAGFLNASRDFHAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++                 S E+      PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFG-------------SDEHKQRFLQPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         A+ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYALDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 SAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G N  +QL   +    +   + + ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGNALKQLLRLIANTCERAQAHESLVELRQPLEQLVARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|325969830|ref|YP_004246022.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
 gi|323709033|gb|ADY02520.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
          Length = 387

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 147/382 (38%), Gaps = 36/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D  +++P    L+R     G         +          +      L      
Sbjct: 27  PIARKMDLEDYYP--RDLIRELSKQGFLTPSAPPEYGGPGIDLRGSVVVVE-ELSRYSPT 83

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              ++  V    + AL    T R  ++  PKI S E+                  L+E  
Sbjct: 84  LGFITEIVNDNIVYALLRYGTDRQREEILPKIASGEW-------------VASYALSEPC 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
            G+D AAI ++ ++            W      +D +++ A+          V   L   
Sbjct: 131 CGSDAAAIETRAERRGGEWVINGRKIWITQGAYADIYLLFARTGPKEARHKAVTAFLVKR 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
           S + +   +L+  +G R     E++F++    ++GD +V     E  +I ++ LD A + 
Sbjct: 191 S-DCVEVSKLE-MMGMRGAGEAEVKFNDC---VVGDDDVLGKVNEGFRIAMVTLDLARIG 245

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +SG+ + L      EA+ +A+ R   G  LID   ++  +ADI   +     ++++ A  
Sbjct: 246 ISGVALGLSQGVLDEALEWAKTRTAFGKPLIDWEWVQFQLADIKAKLEIGRTVTYKAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D             + A I K +  +MA  +  + ++ +GG GY +E    R YR++  
Sbjct: 306 YDNKDPS------FVLYASIAKLYTAQMAVEIARDGVQILGGFGYSKESFSERAYRDAKV 359

Query: 440 NSILLGSGNAMVLDVLNLLEKG 461
             I  G+     + +  +L +G
Sbjct: 360 LEIAEGTNEVQRMVIYKILTRG 381


>gi|119715692|ref|YP_922657.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536353|gb|ABL80970.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 398

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 130/382 (34%), Gaps = 33/382 (8%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      G+        ++ +                  +    +++ 
Sbjct: 35  ELEHADEYPQEIVDGLKELGIFGLTIPEEYDGLGESLLTYALCVEEIARGWMSVSGVINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + PK+ + E                   ++E   G+D++A+
Sbjct: 95  HFIVAYMLMKHGTEEQKRKYLPKMATGEIRG-------------AFSMSEPGLGSDVSAV 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSP----- 267
            ++  K   G        W  +   S+   +LA+ +         +   L +  P     
Sbjct: 142 KTKATKTDGGYTIDGQKMWLTNGGTSNLVAVLARTDEGADSVYKNMTTFLVEKEPGFGET 201

Query: 268 -NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAI 322
             GL      +K+G +   T E  F          L G        + D   +  ++ A 
Sbjct: 202 APGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGAPGQGFYQMMDGVEVGRVNVAA 261

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V     +   AI YA++R   G  +     +   +A++A  +  A A+  + A   D 
Sbjct: 262 RAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAEMATKVETAHAMMVKAARLKDR 321

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A+++A        +    V+ ++    GG GY +E  I R YRE+    I
Sbjct: 322 GERNDVEAGMAKMVAA-------EYCNEVVQDSFRIHGGYGYSKEYEIERLYREAAFMLI 374

Query: 443 LLGSGNAMVLDVLNLLEKGTNL 464
             G+ +   + +   L K   L
Sbjct: 375 GEGTSDIQKMIIGRSLLKDYQL 396


>gi|257055678|ref|YP_003133510.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256585550|gb|ACU96683.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 384

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 22/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   GL    +  S           +       +A    G + S      ++  
Sbjct: 42  RELHAKAAELGLLGVSFPESVGGSGGDIVDALTVVEEVHLAGGSGGVVASLFTGGIALPH 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           ++               R        P         L +TE  GG+D+A++ +   +  D
Sbjct: 102 IVAAGD-----------RWQIDRWVRPTLAGKTIGALAITEPDGGSDVASLRTTAVRDGD 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             Y ++G K F++S     F+  A   G+ G   +  L+ +    G    R   K+G   
Sbjct: 151 H-YVVNGAKTFITSGCRADFVTTAVRTGQPGAHGLSLLVIEKGTPGFFVSRRLEKMGWHC 209

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +       L+G  N + G +    +   L  A+ + +  + +L   + + R
Sbjct: 210 SDTAELSFDDVRVPASHLVGAENSAFGQIATQFVAERLTLAVQAYATAQRALERTVEWCR 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  LI +  ++  +A++A  I  A     ++A      +    +  +A+  A   
Sbjct: 270 LRETFGRPLISRQTVQHTLAEMARRIDVARTYVRQVAARHAAGEEVIAQTCFAKNTAVEA 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             W       V+ +A++  GG GY  E  + RHYR+     I  G+   M       L
Sbjct: 330 GSW-------VVDKAVQLHGGLGYSRESEVERHYRDMRILGIGGGATEIMTTLAAKRL 380


>gi|56476574|ref|YP_158163.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312617|emb|CAI07262.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 377

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 133/376 (35%), Gaps = 28/376 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P     D+    P   AL R     G     +  S             A   + +A
Sbjct: 22  ERIAPQAAALDEARAFP--RALFRELAELGFFGMRYPESVGGSGL-------ALSEFCLA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             E          + +M +LM T      +   + + +       P  +      + +TE
Sbjct: 73  LSEVARGSMSLAGAVAMQSLMGT-----KFLQLLGNADIVERLFKPALRGDRIGAICMTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+ +I +   ++  G        W  S+P++D F + A+        +    L +
Sbjct: 128 PNAGSDLESIATTATRVDGGYVINGQKTWITSAPVADFFTVFARAGDEKKLTI---FLVE 184

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDS 320
               G+   R  +K+G  +  T E+ F   F      L  +     G ++     I + +
Sbjct: 185 KDVPGITVGREIHKMGVWALPTSEVAFDGCFVPDSHRLSKEEGDGEGHLKKTLAEIRIIT 244

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             M++   R +L  A+ YA  R   G  +     ++  +AD+A  + AAT L  R A   
Sbjct: 245 GAMALGVARAALFAAVRYAGERKQFGKPINRFQAIQLKLADMATGLEAATTLVHRAAWLC 304

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   +EAA A       K +  + A  +  +A   +   GY  E  + R+ R+    
Sbjct: 305 DMKRPHHKEAAMA-------KLFATETAAGICDDAARVLASYGYAMEYPVQRYLRDVRFT 357

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+   + L +  
Sbjct: 358 LIGGGTSEILKLVIAK 373


>gi|226365188|ref|YP_002782971.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243678|dbj|BAH54026.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 386

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 129/376 (34%), Gaps = 26/376 (6%)

Query: 89  PGGERWDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQL 146
           P G   D+ +   P    +  ++   G+   +    F              +  L     
Sbjct: 32  PRGREVDEADVVTPV--DIFAKAAAVGITDFMIPEEFGGGGMGDVFTQCLVQEELCWGDP 89

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G+L+  +   +  + ++ T    K W   +                +    L  TE  
Sbjct: 90  GIGNLVCSNGFFSDPIMVLGTQEQKKQWLGPLTG------------PNAPMTSLATTEPG 137

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A+I +    +  G        W  ++  +  +++ A+ +       V   L +  
Sbjct: 138 SGSDAASIVTTAACVDGGYRINGQKAWISNAGAAQFYVVFAKTDRTQRSGGVSAFLIEKG 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIM 323
             G+ +     K+G R+    E+ F N F      L         +     +  +     
Sbjct: 198 AEGMTFGEPMKKMGQRAIVCREIFFDNVFVPEENRLGAEGQGFYGLMGTFDISRVVLGAA 257

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   R +   A+ YA+ R   G  +I+   +   +AD+A  I +A  L    A   D  
Sbjct: 258 AVGAARAAYEYALDYAKSRKQFGVPIIEHQAVAFRLADMATRIESARLLVHHAARIIDSG 317

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +       AR +A + K    + A  V   A++ +GG GY  E  + +  R+     I 
Sbjct: 318 GN-------ARGIAAMAKLTASETAMFVTHAAVQTLGGWGYSREYPVEQWMRDVKLEEIE 370

Query: 444 LGSGNAMVLDVLNLLE 459
            G+ + M L +   L+
Sbjct: 371 EGTSDIMKLVISRNLD 386


>gi|281355274|ref|ZP_06241768.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281318154|gb|EFB02174.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 572

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 94/511 (18%), Positives = 191/511 (37%), Gaps = 62/511 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE++GE       +  +R  +   P    +   G     V +HP     L      G+  
Sbjct: 55  LEVVGEICGDR-IEPRSRTVDAEGP----HFADGV----VTYHPLTVQNLNDLKQAGVMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
            + D  F  +    +       +   A     ++       A  +    +    + + P 
Sbjct: 106 VMLDHKFGGLNFPVSVYTMMTEMVSRADGSLQNIF-GLQDIAETINFFGSDEQKEKYLPG 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLS 236
             S EYD               + LTE   G+D+ ++  +  +    G + L+G K F++
Sbjct: 165 FASGEYDG-------------SMDLTEPDFGSDLQSVRLRAWQDEKTGQWYLNGMKRFIT 211

Query: 237 SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  +   ++LA+ E        +   + +  P  L  +R++NK+G    AT EL++++  
Sbjct: 212 NGCAKVHLVLARSEEGTSDGRGLSMFICEACPQ-LVVRRIENKLGIHGVATTELQYNDVP 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L G         V  +     +  +  ++     +  EA  YA  R      +   P 
Sbjct: 271 AVLCGKRRFGLIKYVMSLMNGARVAISGQAIGIAEAAYREARKYAAERMQFKKSIDQFPA 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD---------------EAKSRSEEAAY---ARIM 396
           +   +A + + + AA AL +      D                A  R+++  Y   A ++
Sbjct: 331 IYDMLAGMKVKLTAARALLYETTRVVDLRNGYTHLVEHGENVSADDRAKQKYYNKVAAVL 390

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455
            P+ K    +MA  V  +A++  GG+G++++ +  R YR++   +I  G+    V+  + 
Sbjct: 391 TPMCKALATEMANQVAYDAIQIHGGTGFMKDFNAERFYRDARITNIYEGTTQLQVVAAIG 450

Query: 456 NLLEKGTNLFEQLFSTLE-----QDLGSSGKKVITILRDSISLCKEDKG------LARFL 504
            ++++  ++  Q  ++L+       L  +  K+     +++    E K       +AR L
Sbjct: 451 GVIQRDNDVRIQELASLDYTGKLARLRDTVMKLHARQLEAVKFVAEKKDPAYHDLMARSL 510

Query: 505 TEKIALASSAAALYRAGM-----NDIADVFL 530
            E          L R  M       IA+ F+
Sbjct: 511 VEMETYIFVGLLLLRDAMKCEDRAAIAERFI 541


>gi|297171976|gb|ADI22961.1| acyl-CoA dehydrogenases [uncultured nuHF2 cluster bacterium
           HF0500_39O04]
          Length = 423

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 17/283 (6%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E   +   P+ +        ++E  GG+D+AA+ +  +   +         W  ++ +
Sbjct: 145 SDEQKQSYLVPVAEGKKIAAFAISEPEGGSDVAAMRTTAKLDGNEYCLNGKKAWISNAGI 204

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           ++ +++ A+ +   G   +   + D    G+      N I      T  L   N     +
Sbjct: 205 ANYYVLFARTDDAPGAKGLSAFIVDSDTPGITVSERINVIAPHPLGT--LSLKNCR---I 259

Query: 300 GDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
             +N+     +  K+ +             S+   R ++ EAI  +++R   G  + +  
Sbjct: 260 PTVNILGSSGDGFKVAMATLDVFRTTVGAASLGFARRAMDEAIARSKQREAFGKPISEFQ 319

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  IAD+AL I A   L +R A   D      E+       + + K +  + A  VI 
Sbjct: 320 LIQEKIADMALKIDAMALLIYRSAWVKD------EKGTRVTRESSMAKLYGTEAAQEVID 373

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +A++  GG G +   ++ R YRE  A  I  G+     L +  
Sbjct: 374 QAVQIFGGMGVVSGVTVERLYREIRALRIYEGTSEIQKLVIAG 416


>gi|326334196|ref|ZP_08200419.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325947987|gb|EGD40104.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 397

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 136/380 (35%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   ++      G+   +    +  +                  +    +++
Sbjct: 34  QELEHADEYPTEIVEGLKELGIFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+    T    + + PK+ + E             V     ++E   G+D++A
Sbjct: 94  THFIVAYMLMQHGTEEQKQKYLPKMATGE-------------VRGAFSMSEPGLGSDVSA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGC--FLVPRLLEDGSPN-- 268
           ++++  K +DG Y ++G K +L++  S   + +L + +         +   L + +P   
Sbjct: 141 VSTKATKQADGSYEITGQKMWLTNGGSSTLVAVLTKTDEGAESVYKNMTTFLVEKTPGFG 200

Query: 269 ----GLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G+      +K+G +   T E+ F          L G        + D   +  ++ 
Sbjct: 201 ETAQGVTVPGKIDKMGYKGIDTTEMIFEGHKISADQILGGVPGKGFFQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +           I Y+++R   G  + +   +   +A++   +  +  +  R A   
Sbjct: 261 AARACGLAIRGFELGIAYSQQRQTFGKKIAEHQAILFRLAEMGTKVEVSHNMMVRAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K    EA  A+++A        + A  V+ ++    GG GY +E  I R  RE    
Sbjct: 321 DTGKRMDVEAGMAKMVA-------SEYANEVVEDSFRIHGGYGYSKEYEIERLMREVKFM 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+ +   + +   L K
Sbjct: 374 LIGEGTSDIQKMIIGRSLLK 393


>gi|282864555|ref|ZP_06273610.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560494|gb|EFB66041.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 401

 Score =  240 bits (613), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  QLEHRDEYPTQIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTREQKDTFLPRMALGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGS--- 266
           TS+G K  D         W  +   S    +L + +     G      +   L +     
Sbjct: 142 TSKGVKEGDEYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEAGF 201

Query: 267 ---PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++R   G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRQTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|327260753|ref|XP_003215198.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 362

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 68/317 (21%), Positives = 117/317 (36%), Gaps = 20/317 (6%)

Query: 154 PSVTSASMVALMTTP--RVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                A M A  T P   +H D    +     S+E        M        + +TE   
Sbjct: 50  GDCLHARMYANCTGPGFSLHSDIVMPYIANYGSKEQIQKFIPQMVAGKCIGAIAMTEPGA 109

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLED 264
           G+D+  + +  +K     + L+G K F+++  MSD  I++A    E R     +   L +
Sbjct: 110 GSDLQGVRTNAKKDGSD-WILNGSKVFITNGWMSDLVIVVAVTNREARSPAHGISLFLVE 168

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   KIG ++  T EL F +       LLG  N     +        L  A
Sbjct: 169 NGMKGFIKGRKLEKIGLKAQDTAELFFEDVRLPASALLGQENKGFYYLMAELPQERLLIA 228

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M+++       E  +Y ++R   G  +     ++  +A++  +I    A          
Sbjct: 229 DMAIASCEFMFEETRNYVKQRKAFGKTIAHLQTVQHKLAELKTEICVGRAFLDHCLRLHS 288

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  S  A+ A       KYW   +   V  + ++  GG GY+ E  IA+ + +S    
Sbjct: 289 GKRLDSATASMA-------KYWASDLQNNVATQCVQLHGGWGYMWEYPIAKCFVDSRVQP 341

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   +
Sbjct: 342 IYGGTNEIMKELIARDI 358


>gi|226363234|ref|YP_002781016.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241723|dbj|BAH52071.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 383

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 137/375 (36%), Gaps = 34/375 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D++    AW A    +   G+        F        ++ R      +A+       S 
Sbjct: 35  DRLIDRSAWLA----AGKSGIVGLAVPEEFGGSGVTD-YRFRYVVAEEIARTATTSFGSG 89

Query: 155 ----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                  +   +A + T    + W P + + E             +   + +TE   G+D
Sbjct: 90  LSLQDDIAIPYIANLGTDEQKQRWLPGMAAGE-------------LIGAIAMTEPGAGSD 136

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +  + +   +  D  + ++G K F+++ +  D  I++A+ +   G      ++ +    G
Sbjct: 137 LQGVKTTAVRDGDE-WVINGQKTFITNGIHSDLVIVVARTDVNAGSKGFSLIVVERGTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G     T EL F +       LLG        + +   L  +  A+ +++
Sbjct: 196 FSRGRKLHKVGLAGQDTAELGFEDVRVPAANLLGAEGRGFVHLMENLPLERISIAVNAIA 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +      Y   R   G  + D    + A+A++  +I    +   R   + +  +  
Sbjct: 256 AAKAAYGWTRDYVFDRKAFGKPIGDLQNTRFALAEMLTEIEVTESHVDRCVLALNADELT 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +A+ A+        W  ++   V+   ++  GG GY+ E  I R Y +S   +I  G+
Sbjct: 316 AVDASKAKW-------WASELQKRVVDRCVQLHGGYGYMMEYPIGRAYVDSRIQTIYGGT 368

Query: 447 GNAMVLDVLNLLEKG 461
              M   +   +  G
Sbjct: 369 TEIMKEIIGRDIAAG 383


>gi|293607052|ref|ZP_06689395.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814542|gb|EFF73680.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 397

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 127/361 (35%), Gaps = 32/361 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRV 170
             GL  +    ++             AR           +MS  S      +    +   
Sbjct: 61  ELGLLGATIPEAYGGAGMNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGSEAQ 120

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+   E+                 GLTE   G+D   + ++  K SDG      
Sbjct: 121 KQKYLPKLARGEW-------------IGCFGLTEPNHGSDPGGMETRAVKTSDGYKISGN 167

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+  G      +   + D    GL    +  K+G R++ T E+ 
Sbjct: 168 KMWITNSPIADVFVVWAKCVGGDFDGKIRGFILDKGMKGLSAPAIHGKVGLRASITGEIV 227

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHV 344
                       +     V  +K     L+SA   ++   V  AEA  +  R     R  
Sbjct: 228 MDEVEV----SEDQMMPGVSGLKGPFTCLNSARYGIAWGAVGAAEACWHTARQYTLDRKQ 283

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    ++++ +AD+  +I  A     RL    DE  +       A  +  I K   
Sbjct: 284 FGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNS 336

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   
Sbjct: 337 CGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQA 395

Query: 465 F 465
           F
Sbjct: 396 F 396


>gi|261364332|ref|ZP_05977215.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996]
 gi|288567591|gb|EFC89151.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996]
          Length = 589

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 104/563 (18%), Positives = 189/563 (33%), Gaps = 77/563 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGP---GGERWDKVEFHPAWHALLRRSI 111
               E L          E AR A+      +  G     G   D +  HP          
Sbjct: 26  LPHAEGLDAETADAVLDEAARFASEQWADTNRTGDLHGAGFSDDLITTHPDLARAYYDFC 85

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G         F               ++  A L    +   ++ +   +    +    
Sbjct: 86  EAGWAGLRAPAEFGGQGLPAVVSAACEEMWCAANLALSLMPMLTLGAVDALFKHGSEEQK 145

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S E+  T             + L+E + G+D+  I ++     +G Y LSG 
Sbjct: 146 QIYLPKMCSGEWAGT-------------MNLSEPQAGSDLNHIATRAVPKENGAYALSGQ 192

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++    +       ++LA++         V  F+VP+ L +     G  NG+    +
Sbjct: 193 KIFITWGDQEMTENIVHLVLARLPDAAPGVQGVSMFIVPKYLVNADGSLGGRNGVRAIGI 252

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G  ++ T  +EF N  G+L+G        +  M     L+  I   +    +   A
Sbjct: 253 EHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTMMKTARLNVGIEGHAVAERAYQNA 312

Query: 336 IHYARRRHVS--------GGILIDQPVMKRAIADIALDIAAATALSFR------LANSFD 381
           + YA+ R              +I  P ++R +      +AA  AL  R       A +  
Sbjct: 313 LAYAKERVQGRDEADGSDDVAIIRHPDVRRMLLIQKATLAAQRALYLRAAALTDFAAACP 372

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +   R E       + PI K W       +   A++  GG+GY+EE  +A++ R+     
Sbjct: 373 DNVLRKEAERELDFLIPIVKAWPTDNGVVLTNLAVQIYGGAGYVEESGVAQYLRDVRITP 432

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLF---------EQLFSTLEQDLGSSGKKVITILRDSIS 492
           I  G+      D+      G N           + L   L     ++ +++   +  +  
Sbjct: 433 IYEGTNGIQAADLAGRKTTGKNGALPLKLLAEGKDLADKLAAAEPAAAQQLAQAIETAEQ 492

Query: 493 LCKEDKGLARF----------LTEKIALASSAAALYRA------GMNDIADVFLENRFLD 536
                 G A              +++ L   A  L RA         + AD F    +  
Sbjct: 493 SIARMVGYADRPALAAAASNAYLQQMGLTLGAIGLARAYLAAESARTEDADGFGSGFYTA 552

Query: 537 NCHSTHCMLHGRFNAAHIIDSLY 559
             H+       R   AH++  +Y
Sbjct: 553 QQHN------ARVYCAHVLPQVY 569


>gi|66043772|ref|YP_233613.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
 gi|63254479|gb|AAY35575.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Pseudomonas syringae pv. syringae B728a]
          Length = 600

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 88/505 (17%), Positives = 176/505 (34%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            +    P     +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYEK--------GEAILIPEVKPAVDAFIAAGFLNASRDFDVGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++    +    + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   +G Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   + + ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLIANTCERAQAHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|237509158|ref|ZP_04521873.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
 gi|235001363|gb|EEP50787.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346]
          Length = 390

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            L L  
Sbjct: 28  KEISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSLELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAG-------------RRISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S M +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL DG   GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 192 LLVDGDTPGLSKTPLK-KMGWWASDTAHLRFEDCRVPAANLIGPEGGGFALVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A  I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAEEIMKDLAARQLE 389


>gi|226305321|ref|YP_002765279.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184436|dbj|BAH32540.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 387

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 132/376 (35%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAEHDANHTFP--YEVVAGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  +         ++W P++ S                    GLTE   
Sbjct: 89  AITLEAGVSLGAMPIYRFGNEAQKEEWLPQLTSG-------------KSLAAFGLTEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVE-GRVGCFLVPRLLE 263
           G+D     +  +  S G + ++G+K F+++  +D      + A       G   +  +L 
Sbjct: 136 GSDAGGTKTTAKFDS-GEWIINGNKQFITNSGTDITKLVTVTAVTGVKDGGKKEISTILV 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
             +  G   +   NK+G  ++ T  L F++        L     G    ++IL    +  
Sbjct: 195 PTTTPGFTAEPAYNKVGWNASDTHPLTFADVRVPEENLLGERGRGYANFLRILDEGRIAI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +SV   +  + E+I YA+ R   G  +     +   IA +      A    +  A   
Sbjct: 255 SALSVGAAQGCVDESIKYAKEREAFGRPIGHNQAIAFKIARMEARAHVARTAYYDAAALM 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K   ++       A I K    + A     +A +  GG G++ E ++ARHYR+S   
Sbjct: 315 LSGKPFKKQ-------ASIAKLISSEAAMDNARDATQIHGGYGFMNEYAVARHYRDSKIL 367

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+    ++ +  
Sbjct: 368 EIGEGTTEVQLMLIAR 383


>gi|229490625|ref|ZP_04384463.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229322445|gb|EEN88228.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 387

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 132/376 (35%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAEHDANHTFP--YEVVAGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     +  +         ++W P++ S                    GLTE   
Sbjct: 89  AITLEAGVSLGSMPIYRFGNEAQKQEWLPQLTSG-------------KSLAAFGLTEPGA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVE-GRVGCFLVPRLLE 263
           G+D     +  +  S G + ++G+K F+++  +D      + A       G   +  +L 
Sbjct: 136 GSDAGGTKTTAKFDS-GEWIINGNKQFITNSGTDITKLVTVTAVTGVKDGGKKEISTILV 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
             +  G   +   NK+G  ++ T  L F++        L     G    ++IL    +  
Sbjct: 195 PTTTPGFTAEPAYNKVGWNASDTHPLTFADVRVPEENLLGERGRGYANFLRILDEGRIAI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +SV   +  + E+I YA+ R   G  +     +   IA +      A    +  A   
Sbjct: 255 SALSVGAAQGCVDESIKYAKEREAFGRPIGHNQAIAFKIARMEARAHVARTAYYDAAALM 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K   ++       A I K    + A     +A +  GG G++ E ++ARHYR+S   
Sbjct: 315 LSGKPFKKQ-------ASIAKLISSEAAMDNARDATQIHGGYGFMNEYAVARHYRDSKIL 367

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+    ++ +  
Sbjct: 368 EIGEGTTEVQLMLIAR 383


>gi|303325028|pdb|3MPI|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325029|pdb|3MPI|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325030|pdb|3MPI|C Chain C, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325031|pdb|3MPI|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
           Glutaryl-Coa Complex
 gi|303325032|pdb|3MPJ|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325033|pdb|3MPJ|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325034|pdb|3MPJ|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325035|pdb|3MPJ|E Chain E, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325036|pdb|3MPJ|F Chain F, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
 gi|303325037|pdb|3MPJ|G Chain G, Structure Of The Glutaryl-Coenzyme A Dehydrogenase
          Length = 397

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 138/375 (36%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++WD     P +   +R     G   ++    +      Q           +A+  +
Sbjct: 26  PFADQWDNENHFP-YEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSS 84

Query: 149 ---GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L    +  A  +    +  + K + PK+ S E+               G G+TE 
Sbjct: 85  ALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEF-------------LGGFGITEP 131

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LED 264
             G+D+ A++S  +   D         W  ++  +D  I  A  +   G   +    +E 
Sbjct: 132 DAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEP 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSA 321
            +  G+    L+ K+G+ ++ T EL   N        L         V        L +A
Sbjct: 192 RNFPGIKTSNLE-KLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   +  L  AI Y   R   G  + D  + +  IA +A+++ AA  L+++ A + D
Sbjct: 251 AGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKD 310

Query: 382 EAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E + +   + A A+  A      C          AM  +G  GY  E  +AR YR++P  
Sbjct: 311 EGRLNNGLDVAMAKYAAGEAVSKC-------ANYAMRILGAYGYSTEYPVARFYRDAPTY 363

Query: 441 SILLGSGNAMVLDVL 455
            ++ GS N   + + 
Sbjct: 364 YMVEGSANICKMIIA 378


>gi|297162062|gb|ADI11774.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 388

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 126/379 (33%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW+          +   +   GL             +    + R+  +   A++ A
Sbjct: 27  PHQERWEAEHIID--RGVWTAAGKQGLLGLAAPEEHGGGGQDD-FRYRSVMMEEFAKVGA 83

Query: 149 GHLMSPSVTSASMVA----LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             L S       +V      + T    + W P I + E                 + +TE
Sbjct: 84  ASLGSGFSVQDDIVLPYLLDLGTEEQKRRWVPGICAGE-------------TITAIAMTE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+  I +   +  D         +  S   SD  I+LA+ +   G   +   + +
Sbjct: 131 PGAGSDLQGIRTTAVRDGDVWVLDGAKTFITSGIQSDLVIVLARSDPAAGARGMSLFVVE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    R  +KIG  +  T EL F +        L         M ++  L    M+
Sbjct: 191 RGMPGFTRGRKLDKIGLHAQDTAELFFDSVRIPAANLLGTEGRGF--MHLMERLPRERMA 248

Query: 325 VSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++          L + + Y   R   G  + D    +  +A++            R   +
Sbjct: 249 IAVTAQCVTETVLEQTLDYCTERTAFGRPVADFQHSRFLLAELTTQADITRVYLDRAIEA 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            ++    + +AA A+        W  ++    +   ++  GG GY++E  +AR + +S  
Sbjct: 309 LNDGTLTAVDAAKAKW-------WATELQTKTVDRCLQLHGGYGYMKEYPVARAFLDSRI 361

Query: 440 NSILLGSGNAMVLDVLNLL 458
            ++  G+   M   +   L
Sbjct: 362 QTVYGGTTEIMKEIIGRDL 380


>gi|47086169|ref|NP_998100.1| acyl-CoA dehydrogenase-like [Danio rerio]
 gi|45709336|gb|AAH67617.1| Zgc:85777 [Danio rerio]
 gi|148725455|emb|CAN88156.1| novel protein (zgc:85777) [Danio rerio]
          Length = 432

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 139/379 (36%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ +  A      
Sbjct: 69  QEINPHVDKWEEEGLFPA-HKIFKILGSAGFLGVNKPVEYGGLGLDFSYSLAVAE----- 122

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G++    +  A  V + M TP + +       S E       P     V + LG++
Sbjct: 123 --ELGNINCGGIPMAIGVQSDMATPALARFG-----SAELKKEFLQPTIMGDVVVCLGVS 175

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I ++  +  D      G  W  +   +D   +LA             +  
Sbjct: 176 ETGAGSDVASIKTKAVRKGDEYVINGGKMWTTNGTQADWMCLLANTSDGPPHKNKSLICL 235

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G+   R  NKIG  S+ T E+ F +        +     G    M       L  
Sbjct: 236 PMKLPGVHIARKINKIGMHSSDTAEVFFDDVRVPCSNVIGQEGMGFTYQMLQFQEERLWG 295

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               ++ M   + E I Y R+R +    ++   V+   +A++ ++I    +L  R    +
Sbjct: 296 VANILTVMEKVVQETIQYTRQRKIFNQPILHNQVVHFRLAELQMEIELLRSLLHRATALY 355

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +    ++       +A + K    ++A  +    ++  GG GY  +  ++R YR+S   
Sbjct: 356 IKGNDVTK-------LASMAKLKAGRLARELADSCLQYWGGMGYTSDVLVSRFYRDSRLM 408

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+   M+  +   ++
Sbjct: 409 SIGAGADEVMLSIICKYMD 427


>gi|71733383|ref|YP_272797.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71553936|gb|AAZ33147.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 670

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 179/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 128 RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 179

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 180 QACFAHFQAANVGTTAYSFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 226

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 227 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 286

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 287 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 346

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 347 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 405

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 406 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDARKHAHELLDLLT 465

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 466 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 525

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   + +    + G   +  LR  +  L    + +   L   +A    
Sbjct: 526 KLAQNGGTGLKQLLRLISETCARAQGYDSLHELRQPLEQLATHVQAVTLGLLTDLAQGRI 585

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 586 TSTLANSALYLKVFGHTIIGWRWLE 610


>gi|86740866|ref|YP_481266.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3]
 gi|86567728|gb|ABD11537.1| Butyryl-CoA dehydrogenase [Frankia sp. CcI3]
          Length = 399

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 126/384 (32%), Gaps = 34/384 (8%)

Query: 95  DKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           + +E    +   +  ++ + GL        +  +                  +    +++
Sbjct: 34  NDLEHRDEYPEDIIEAMKEMGLFGITIPEEYGGLGESLLTYALVVEEIARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A ++    +    +   P + + E             +     ++E   G+D++A
Sbjct: 94  THFIVAYLILQHGSEEQKRRLLPVMATGE-------------LRGAFSMSEPGCGSDVSA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLEDGS 266
           IT++  +  D         W  +   +     L + +            FL+ +     +
Sbjct: 141 ITTRADRDGDEYVLNGQKMWLTNGARAGVVATLVKTDEGAQSVYRNMTTFLLEKEPGFRT 200

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G+       K+G +   T E+  ++        L    G  +    ++       ++ 
Sbjct: 201 HGGITIPGKLEKLGYKGVETTEMVLADHRVPASAILGGEAGRGQGFYQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +   M  +    I YA++R   G  + +   +   +A++A  + A   +    A   
Sbjct: 261 AARACGIMIRAFELGIAYAQQRRTFGRPIAEHQAIAFKLAEMATKVEAGHLMMVSAARRK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +    EA  A+ +A        +    V  EA    GG GY +E  I R YRE+P  
Sbjct: 321 DDGQRNDVEAGMAKYLA-------SEYCHEVTTEAFRIHGGYGYSKEYEIERLYREAPFM 373

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            I  G+       +   L K   L
Sbjct: 374 LIGEGTSEVQKRIISRALLKEYQL 397


>gi|296282142|ref|ZP_06860140.1| acyl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 391

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 129/365 (35%), Gaps = 32/365 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVA 163
            +L      GL        +       +  +   R+   A      + S ++    + + 
Sbjct: 42  EILDEMREMGLFGLTMPEEYGGAGMNTSQYVETIRVLSYALPAYRSITSINLGMVCTALK 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W P++ + E                  GLTE   G+D AA+ +   K  +
Sbjct: 102 KSGTEAQKAEWLPRLAAGE--------------IACFGLTEPGSGSDSAAMQTTAVKDGN 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G       ++  ++P +   +++A+           V   L D    G+   +   K+G 
Sbjct: 148 GYRLNGSKRYITNAPFAKLGLIMARTSKEPLPKNAHVSAFLVDMEKAGVTVGKPDKKMGQ 207

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----A 335
             +   ++   +      GD  +     +  +  ++ LD+  +SV+      A      A
Sbjct: 208 EGSQIADIYLDDVHV--DGDALLGGEEGQGFRTAMMSLDNGRLSVAAASAGYARRILDTA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  +    +++  +AD   +I AA  +        D  +     AA    
Sbjct: 266 MRYAQDRKAFGEPINQFQLIQAMLADSESEIYAAECMLKDATAKVDADEPSLLPAA---- 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
               TK +  +M   V    ++  GG+GY+ E    R YR+S   +I  G+   M L + 
Sbjct: 322 ---STKLFASEMCNRVADRCVQIHGGAGYLAEYEAERFYRDSRIYTIYEGTSQIMQLVIA 378

Query: 456 NLLEK 460
             + +
Sbjct: 379 KAMLR 383


>gi|239983347|ref|ZP_04705871.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455171|ref|ZP_06594561.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358120|gb|EFE85022.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 401

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 128/379 (33%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTQIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++ + E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQREYFLPRMATGE-------------VRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +++G K+ D         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 STKGVKVGDEYALTGQKMWLTNGGSSTLVAVLCRTDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL       K+G +   T E+            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIEKMGYKGVDTTEMILDGLRIPANRVLGGTTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +     + +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEAVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|167840719|ref|ZP_02467403.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 387

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 141/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  +            + L  
Sbjct: 25  KEISPYVNDWDEAGEFP--RELYEKAAQVGLLGIGFPDAYGGIESVDMFHRLICSIELAR 82

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I +                   L +
Sbjct: 83  CGAGGVVSSLMSHTIGAPPIAHAGSAELKARVLPGILAG-------------RKVSALAI 129

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S + +D + +  + + G +G   +  
Sbjct: 130 TEPGGGSDVAALRTSAMRDGD-RYVVNGEKVFITSGIRADYYTVAVRTDPGALGAKGLSL 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL +    GL    LK K+G  ++ T  L F +       L+G        V     L  
Sbjct: 189 LLVEDGTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFNLER 247

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A   + A
Sbjct: 248 FSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHKLVDMAMRIGATRAWLEQCA 307

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R+ E         + K +  +        A++ +GG GY+      R YRE 
Sbjct: 308 WQIDHVDRRAPE---LVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 364

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 365 KVNMIGGGAEEIMKDLAARQLE 386


>gi|108798727|ref|YP_638924.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867845|ref|YP_937797.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434330|ref|YP_001070021.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108769146|gb|ABG07868.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693934|gb|ABL91007.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126234130|gb|ABN97530.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 397

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 129/383 (33%), Gaps = 35/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  +  + +P    ++      GL   +    +  +                  +  
Sbjct: 31  PNAQELEHADTYP--QEIVDAMREMGLFGLMIPEEYGGLGESLLTYALCVEELARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T    + + P++ + E                   ++E   G
Sbjct: 89  SGVINTHFIVAYMIRQHGTEAQKQRFLPRMATGE-------------TRGAFSMSEPELG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE--GRVGCFLVPRLLEDG 265
           +D+AAI ++ ++   G Y + G K +L++  S   +  L + +         +   L + 
Sbjct: 136 SDVAAIRTRARRDDSGGYVIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNLTAFLVEK 195

Query: 266 S------PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKIL 315
                    GL      +K+G +   T EL F          L          + D   +
Sbjct: 196 PTGFGEVMPGLTIPGKLDKLGYKGIDTTELIFDGYRASAEDILGERPGQGFFQMMDGVEV 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ +  +      +   A+ YA++RH  G  + D   +   +A++A  + AA  +   
Sbjct: 256 GRVNVSARACGVGLRAFELAVRYAQQRHTFGKPIADHQAIAFQLAEMATKVEAAHLMMVN 315

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +     A  A+ +A        +    V  ++    GG GY +E  I R  R
Sbjct: 316 AARLKDSGERNDVAAGMAKYLA-------SEFCAEVTQQSFRIHGGYGYSKEYEIERLMR 368

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++P   I  G+       +   L
Sbjct: 369 DAPFLLIGEGTSEIQKNIISKRL 391


>gi|308270656|emb|CBX27267.1| hypothetical protein N47_I06870 [uncultured Desulfobacterium sp.]
 gi|308272123|emb|CBX28731.1| Acyl-CoA dehydrogenase [uncultured Desulfobacterium sp.]
          Length = 387

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/392 (19%), Positives = 145/392 (36%), Gaps = 28/392 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q L         +     P  + WD   + P ++ +++     G   ++   
Sbjct: 2   DFKLSEELQMLKDTVRDFADE--KIAPFADEWDMNHYFP-YNEVVKPMGELGFFGTVIPE 58

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        A  I    +   +      +   ++  A  +       V K +  K+ + 
Sbjct: 59  EYGGSEMGWLAAMIVTEEIARASSSLRVQVNMQTLGCAYTIFKYGNEEVKKKYISKLVNA 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY               G  +TE   G+D+ AI S  +   D         W  ++ ++D
Sbjct: 119 EY-------------IGGFAITEPDAGSDVMAIKSIAEDKGDHWLLNGSKTWISNANVAD 165

Query: 242 AFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           A I  A  +   G   +   + +  + NG+    L +K+G+RS+ T E+  ++T      
Sbjct: 166 AVIYYAYTDKAAGAKGLSAFVVELKNFNGIRTTDL-DKMGSRSSPTGEIYLTDTKVPKEN 224

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           ++G     T  V        L +A   V   +  L     YA  R   G  +    + + 
Sbjct: 225 IIGKPGDGTKIVFGSLNQTRLSAAAGGVGLAQACLDVVTKYAMERKQFGQEIGKFQMNQD 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  +  +I AA  L +R A + DE    +       +     KY+  + A      AM 
Sbjct: 285 MVGQMNAEIEAARFLVYRAACTKDEGNLNN------GLEVAQAKYFAGETASKCANYAMR 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            +G  GY  E  +AR+YR++P  +++ GS N 
Sbjct: 339 ILGAYGYSTEYPVARYYRDAPTYTMVEGSANI 370


>gi|317487978|ref|ZP_07946561.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|316912927|gb|EFV34453.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 379

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 137/379 (36%), Gaps = 35/379 (9%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+ +  P    +    +  GL    +      V       ++             
Sbjct: 26  RAAAIDEEDEFP--QDIYELFVEQGLFALAYGEEHGGVEVSMHCWVQVIERIARESPAVA 83

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            ++  S   +  +    +    +   P + + E               I   LTE   G+
Sbjct: 84  LMILISAIGSDALVFSGSAEQQRAILPALAAGE-------------AKICFALTEPNAGS 130

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSP 267
           DI+AI++      DG     G  +  +  + D F + A+V  +G+         +     
Sbjct: 131 DISAISTTALPDGDGYTINGGKIFITNGAVGDWFTVFARVVEDGQSKP---SCFIVHRDT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            GL   R ++K+G R + T +L F N      G   V     +   I  + L+   ++V+
Sbjct: 188 PGLVIGRKEDKMGLRGSVTSQLYFENMHV---GPEAVVGEVGDGFAIAHHTLNRGRLAVA 244

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +   +     A A  YA+ R   G  + D   ++  +AD+ + + A+  L  + A++F 
Sbjct: 245 ALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEITLEASRLLLDQAASAF- 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  +       A + K +C + A      A++  GG G  ++  + R+YR++ + +
Sbjct: 304 -----GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLCKDYPVERYYRDAKSFT 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I+ G+       +   + K
Sbjct: 359 IVEGTSQVQRSLIAKSVLK 377


>gi|86157558|ref|YP_464343.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774069|gb|ABC80906.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 385

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 135/374 (36%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P G  WD+    P   AL RR    GL                 + +  A      +   
Sbjct: 32  PHGREWDEAGSFP--RALFRRFGELGLFGIRQPPEVGGSGLDWWYVVAYAEELARCRNAG 89

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++     +  ++  + T    +++              AP  +      L ++E  
Sbjct: 90  LAVSMLVHGEMAIPVIGELGTEAQRREFL-------------APAVRGERVAALAVSEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+AAI +  ++    +       W  +   +D F+ +A   G  G   +  LL    
Sbjct: 137 AGSDVAAIRTTARRDGGDLVVNGSKMWITNGARAD-FLTMAVRTGEAGHGGLSLLLFPTD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIM 323
             G    R   K+G  S+ T  L F +        L         V        L +A+ 
Sbjct: 196 VKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQGFYHVMANFQGERLVAAVQ 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+GM++ L +AI Y   R   G  +      +  +AD    + AA  L++R A+     
Sbjct: 256 AVAGMQLMLEDAIRYGGERSAFGRPVGKFQAWRHRLADHLTSVEAARWLTYRAADLLARG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        A     + K + C++A  V  + M+  GG GY+ E  IAR +R+  A +I 
Sbjct: 316 EP-------AVREISMAKLFACELAQRVAYDCMQLHGGMGYVLESDIARAWRDVRAMTIA 368

Query: 444 LGSGNAMVLDVLNL 457
            G+   M   V   
Sbjct: 369 GGTSEIMRELVSRA 382


>gi|302342724|ref|YP_003807253.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639337|gb|ADK84659.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 382

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 79/395 (20%), Positives = 139/395 (35%), Gaps = 37/395 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
            AR A+    +L    P    +DK   HPA    +      G         +        
Sbjct: 16  AARFAD---DELK---PKAAHYDKTHEHPA--EFVEALGELGFMGIAIPEEYGGAGMDYV 67

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPM 191
             + A           G +MS   +          T    K +               P+
Sbjct: 68  SYVLALSEISRGDASVGVIMSVCNSLYGFPLNSFGTDEQKKAFL-------------TPV 114

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GLTE   G+D AA+ +      +        K+  +  ++   ++ A  + 
Sbjct: 115 ASGKKLGCYGLTEAGAGSDPAAMRTTAVLDGNEWVLNGEKKFITNGNVASYAVVAAITDK 174

Query: 252 RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             G   +   + D  +  G     ++ K+G  ++ T EL F +        L    G ++
Sbjct: 175 AAGAKGISSFVVDLENTKGFSVGFIEEKMGICASGTSELVFEDARIPKENLLGQLGGGLK 234

Query: 311 DMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            M  L+ L+S  + +    +      L EA+ YA+ R   G  +     ++  +ADIA  
Sbjct: 235 QM--LMTLNSGRIGIGSQALGIGRAVLEEAVAYAKEREQFGKPIAAMQAIQWKLADIATH 292

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA  L  R A   D+  +   +AA  ++       +    A A   E ++ +GG GY 
Sbjct: 293 LDAAELLLLRAAWLEDQHANFEMQAAMGKM-------YASDAAMAAAIEGVQVLGGYGYC 345

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +E ++ RH R++    I  G+   M L +   L K
Sbjct: 346 KEYAMERHMRDAKITQIYEGTNEIMRLVIARNLLK 380


>gi|146343640|ref|YP_001208688.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196446|emb|CAL80473.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 389

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 144/402 (35%), Gaps = 29/402 (7%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+++ P+  L  +      P  + W++    PA H L ++    G         F    
Sbjct: 4   TADHDEPRRILQKFIAAEINPHVDEWEEAGIFPA-HELFKKLGDLGFLGLNKPVEFGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++ +      +MA+            +  +   M TP + +       S        
Sbjct: 63  LDYSYAL------MMAEELGAINCGAIPMAIGVQTDMATPALARFG-----SDTVRKEFL 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP         +G++E   G+D+A+I +Q +   D      G  W  +   +D   +LA 
Sbjct: 112 APAISGDYVACIGVSEPGAGSDVASIKTQARADGDDYVINGGKMWITNGTQADFICLLAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
                       +       G+   R  +K+G RS+ T ++ F N        +     G
Sbjct: 172 TSDGPVHRNKSLICVPMKSRGVQVARKLDKMGMRSSDTAQIFFDNVRVPKRNRVGEEGMG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M       L +    +      +   I Y R R   G  ++D  V+   +A++  +
Sbjct: 232 FTYQMMQFQEERLWAGAACLKAHEAIINATIEYTRNRKAFGRSILDNQVVHFRLAELQTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL+++ A +    +  +        +A + K    ++   +    ++  GG G++
Sbjct: 292 VELLRALTYQAAEALVAGEDVTR-------LATMVKLKTGRLGRELTDACLQYWGGMGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            E  ++R YR+S  +SI  G+   M+  +  ++     + + 
Sbjct: 345 NETPVSRAYRDSRLSSIGGGADEVMLTILCKMMGTLPGMAKA 386


>gi|322824208|gb|EFZ29682.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 624

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 145/397 (36%), Gaps = 51/397 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-- 154
           V+    +        + G         +       +  +      LMA       M P  
Sbjct: 97  VKTPKGFKEAYESYKNGGWVGMSLPEEYGGQGLPGS--VGFILRELMATANWSFAMYPGL 154

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+ +A+ +    +   ++ +  K+ S E+  T             + LTE + GTD+A +
Sbjct: 155 SMGAANTLLAWGSKEQNEVYLTKLVSGEWTGT-------------MCLTEPQCGTDLAQV 201

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLE 263
            ++ +  +DG Y ++G K F+S+   D       I+LA+          +  FLVPR + 
Sbjct: 202 KTKAEPCADGTYKINGTKIFISAGDHDMTENIVHIVLARLPDSVPTTKGISLFLVPRHVV 261

Query: 264 DGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                      +    L++K+G + +AT +L F N+ G+L+G  N     +        +
Sbjct: 262 KPDGSLETNKNVKCVGLESKMGIKGSATAQLSFENSVGYLIGAPNEGMKQMFTFMNTARV 321

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
            +++  V    ++   A+ YAR R                  L+  P +++ I       
Sbjct: 322 GTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPNDPLVWHPNVRQNILFAKAVA 381

Query: 367 AAATALSFRLANSFD---EAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEAMECIG 420
               A    +    D   EAK  S   A         PI K    +      +  ++  G
Sbjct: 382 EGGRAFLTDMGRLLDIQGEAKDASLRDALEHEIGFYTPIAKGCLTEWGLEASSRCLQVWG 441

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G GYI+   + +  R++  +++  G+     LD +  
Sbjct: 442 GHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIGR 478


>gi|256393763|ref|YP_003115327.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359989|gb|ACU73486.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 404

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 137/390 (35%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +L+ +   GL+    +   +            A          
Sbjct: 29  PAAAEWDEREETP--WPILQEAAKAGLYSLDFYANQWFDESGLGIPI--AMEEMFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G  +S +  +A  V    TP    +W P++F                       +E   
Sbjct: 85  IGLALSGTGLAAVSVVSNGTPEQVGEWVPQMFGT----------ADDVKLGAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+AA+ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVAAMRTRAVYDQAKDEWVLNGTKTWATNGGIANVHVVVATVDADLGSRGHASFIIPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN------------VSTGPVEDMK 313
           +  G+   +   K G R++ T E+   +        L                       
Sbjct: 195 NTPGMSQGQKFKKHGIRASHTAEVVLDDVRVPGSCLLGGKEKLDARLARAREGKSSRGNA 254

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   +++  +V  M V ++ A +     YA+ R   G  +++   +   +AD+   + A
Sbjct: 255 SMATFEASRPAVGAMAVGISRAAYEYSLEYAKTRVQFGKPIVENQAVAFKLADMKTGVDA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L +R A      K      ++      ++K +  +    V AEA++ +GG+G+  E 
Sbjct: 315 SRLLVWRAAWMARNGK------SFDSAEGSMSKLFASETCKKVTAEAIQILGGNGFTREY 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R +R+S   +I  G+     L +   +
Sbjct: 369 PVERMHRDSAIYTIFEGTSEIQRLVIARTI 398


>gi|228015642|gb|ACP50614.1| glutaryl-CoA dehydrogenase [Desulfococcus multivorans]
          Length = 389

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 138/375 (36%), Gaps = 30/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++WD     P +   +R     G   ++    +      Q           +A+  +
Sbjct: 26  PFADQWDNENHFP-YEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSS 84

Query: 149 ---GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L    +  A  +    +  + K + PK+ S E+               G G+TE 
Sbjct: 85  ALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEF-------------LGGFGITEP 131

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LED 264
             G+D+ A++S  +   D         W  ++  +D  I  A  +   G   +    +E 
Sbjct: 132 DAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEP 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSA 321
            +  G+    L+ K+G+ ++ T EL   N        L         V        L +A
Sbjct: 192 RNFPGIKTSNLE-KLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   +  L  AI Y   R   G  + D  + +  IA +A+++ AA  L+++ A + D
Sbjct: 251 AGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKD 310

Query: 382 EAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E + +   + A A+  A      C          AM  +G  GY  E  +AR YR++P  
Sbjct: 311 EGRLNNGLDVAMAKYAAGEAVSKC-------ANYAMRILGAYGYSTEYPVARFYRDAPTY 363

Query: 441 SILLGSGNAMVLDVL 455
            ++ GS N   + + 
Sbjct: 364 YMVEGSANICKMIIA 378


>gi|284989715|ref|YP_003408269.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284062960|gb|ADB73898.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 399

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 132/389 (33%), Gaps = 35/389 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  +  + +P    ++      G+        F  +                  +  
Sbjct: 31  PHAQELEHADEYP--QEIVDGLKELGIFGLTIPEEFGGLGESLLTYALVVEEIARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A MV    T        P++ + E             V     ++E   G
Sbjct: 89  SGVINTHFIVAYMVMQHGTQEQRDRLLPRMATGE-------------VRGAFSMSEPGLG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE--GRVGCFLVPRLLEDG 265
           +D+A I ++  + +DG Y + G K +L++  S   +  L + +         +   L + 
Sbjct: 136 SDVAGIRTRAVRQADGDYVIDGQKMWLTNGGSSTLVAALVRTDEGAEKAHQNLTTFLVEK 195

Query: 266 SP------NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKIL 315
                    G+      +K+G +   T EL F          L G        + D   +
Sbjct: 196 PAGFGEVVPGITIPGKIDKMGYKGVDTTELVFDGYRAEASDVLGGVPGRGFAQMMDGVEV 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  +      +   AI YA++R   G  +     +   +A++A  + AA A+  +
Sbjct: 256 GRVNVAARACGISIRAFELAIAYAQQRETFGKPIAQHQAIAFQLAEMATKVEAAHAMMVK 315

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  K    EA  A+++A        +    V  ++    GG GY +E  I R  R
Sbjct: 316 AARLKDAGKRNDVEAGMAKLLA-------SEYCAEVTTQSFRIHGGYGYSKEYEIERLMR 368

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E+P   I  G+       +   L K   L
Sbjct: 369 EAPFLLIGEGTSEIQKTIISRGLLKEYAL 397


>gi|226953901|ref|ZP_03824365.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835384|gb|EEH67767.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 265

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 104/273 (38%), Gaps = 13/273 (4%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
           M        + +TE   G+D+ A+ +      D  Y ++G K F+++    D  I++ + 
Sbjct: 1   MATGETVTAIAMTEPGTGSDLQAVRTTAVLEGDE-YVINGSKIFITNGYLCDMAIVVCKT 59

Query: 250 EG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STG 307
                G   +  ++ +    G    +  NKIG +   T EL F N        L +   G
Sbjct: 60  GNTEKGSANLSLIIVEADRAGFSKGKPLNKIGMKGQDTCELFFDNVRVPKENLLGMEGMG 119

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
            +  MK L    +  AI+  +G   + A  + Y + R   G  +      +  +A++  +
Sbjct: 120 FMMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGTFQNTRFKLAELRTE 179

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I              D       E +     A   KY    M   V+ E ++  GG GY+
Sbjct: 180 IDFCRTY-------LDRCMELQLEESLGVDAAAAAKYKISDMFSKVVDECLQLHGGYGYM 232

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  IAR Y ++ AN I  G+   M   +   L
Sbjct: 233 LEYPIARAYIDNRANRIYAGTNEIMKELISRTL 265


>gi|302348382|ref|YP_003816020.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
 gi|302328794|gb|ADL18989.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
          Length = 384

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 130/377 (34%), Gaps = 33/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    ++++    G       + +          +        A    
Sbjct: 24  PVARDIDRDNTVP--PEVIKQVADMGYFALRVPQEYGGPGLSTLESVVVVEELAKASGAV 81

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + + S    A  +    +  + + +  K+                       L+E   
Sbjct: 82  AIMATVSGTMVAYPLVHYASDEIKRRYLEKL--------------ARGSIGAFALSEPCC 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
           GTD AAIT++ +K  D         W  +SP +D F++ A+          V   + D  
Sbjct: 128 GTDAAAITTRAEKDGDEYVINGRKTWITNSPYADFFLVAARTGTPEQRHRGVSLFVVDKG 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +   +L + +G R + T E+ F +        +    G  +   ++  L+   +  +
Sbjct: 188 SC-VEVSKL-DMMGYRGSGTSEVLFKDCRVPEANMVGQLNGGFK--IVMDTLNEGRVVTA 243

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + LAEA     + YA++R   G  + +  +++  +A++ + + A   L +  A   D
Sbjct: 244 ATALGLAEAAFEDSLAYAKQRESMGVPIAEHQMVQYMLAEMKVRVEAIKQLIYEAARRVD 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                        + + + K    +    V   A++  GG GY +E  + R YR+     
Sbjct: 304 AGDPE------YPMWSSMAKLAAAEWGVDVARMAVQVEGGFGYSKESLVERIYRDVKMVE 357

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+  A  L +   L
Sbjct: 358 IGDGTNEAQRLVIARSL 374


>gi|183980183|ref|YP_001848474.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium marinum M]
 gi|183173509|gb|ACC38619.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium marinum M]
          Length = 403

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 135/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +  + + V       + A           
Sbjct: 28  PAAAEWDEREETP--WPVIQEAAKVGLYSPDF-FAQQSVEPSGVGILAAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP     W P++F    DP                 +E   G
Sbjct: 85  AISIMGTGLAAAALAANGTPEQLGRWLPEMFGTPGDP----------KLGAFCSSEPDAG 134

Query: 209 TDIAAITSQGQ-KISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++     + G + L+G K +  +  +++  I++  V   +G       +    
Sbjct: 135 SDVGAIRTRAHFDEAAGEWVLNGTKTWATNGGIANVHIVVVSVHPELGTRGQATFVIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------------STGPVED 311
             GL   +   K G R++ T E+   N        L                 S      
Sbjct: 195 TKGLTQGQKFKKHGIRASHTAEVVLDNVRLPEDAILGGREKFEARIARVKSGASARGQAA 254

Query: 312 MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA
Sbjct: 255 MKTFERTRPTVGAMAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKARIDAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R         +             + K    + A  V  EA++ +GG+GY  +  
Sbjct: 315 RLLVWRAGWMARNNHNFDSA------EGSMAKLVASETAVYVTDEAIQILGGNGYTRDYP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   L
Sbjct: 369 VERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|311745067|ref|ZP_07718852.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126577580|gb|EAZ81800.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 594

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 151/389 (38%), Gaps = 39/389 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E  D ++      ++ +++   GL        +  +       +  A +   A   +   
Sbjct: 50  EEIDSMKNPDLVPSIFKKAGELGLLGISVPEEYGGMGMNFVTSMLIADIIGSAGSFSTTY 109

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +    +    + + PK+ + E+             A    LTE   G+D 
Sbjct: 110 GAHTGIGTLPILYYGSEEQKQKYLPKLATGEW-------------AACYCLTEPDAGSDA 156

Query: 212 AAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  ++     DG  Y ++G K ++S+   +D FI+ A++E       +   + + S  G
Sbjct: 157 NSGKTKATLTEDGKHYLINGQKMWISNAGFADLFIVFAKIEEDK---NLTAFIVEKSFGG 213

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM----- 323
           +     + K+G + ++T ++ F++    +    N+ +      KI +  L+   +     
Sbjct: 214 ITMNEEEKKMGIKGSSTRQVFFNDCKVPV---ENMLSDRQNGFKIAVNILNIGRIKLGSG 270

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381
            + G+R    +AI+Y+  R   G  +     +K  +A++A+    + +L +R     +  
Sbjct: 271 ILGGVRTVTTKAINYSTERKQFGVSINSFGAVKSMLAEMAIRTYVSESLCYRAGQDIEDQ 330

Query: 382 ----------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                     E +++ +      +   I K    ++   V+ + ++  GG GY  E  + 
Sbjct: 331 INEFITDGMPENEAKLKGVEMFAMECAIAKIHGSEVLDYVVDQGVQIYGGMGYSAEAPME 390

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
           R YR++    I  G+     + ++ +L K
Sbjct: 391 RAYRDARIARIYEGTNEINRMLMIGMLLK 419


>gi|114799465|ref|YP_759820.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114739639|gb|ABI77764.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 396

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 137/380 (36%), Gaps = 35/380 (9%)

Query: 96  KVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    W A L+      GL  ++    +  +    +   +   +     +    + + 
Sbjct: 33  QLEHDNEWPADLVADMTELGLFGALIHPDYGGLGLSASTYTKIVTMISEEWMSLSGIFNS 92

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +  + +V    T +  + W PK  + E             +   LGLTE   GTD+ +I
Sbjct: 93  HLMMSIVVQKFGTDKQKEYWLPKFAAGE-------------LRGALGLTEPDAGTDLQSI 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLEDGSP 267
            +  ++  D         W  ++       +L + +             +VP++  +   
Sbjct: 140 RTVAKRKGDKYVVNGTKTWISNAIEGHCVALLVKTDPDAQPRYKGMSMLIVPKINPETRA 199

Query: 268 N--GLCYQRLKNKIGNRSNATVELEFSN--TFGFL---LGDLNVSTGPVEDMKILIYLDS 320
              G+   R   K+G +   + E  F +      L    G              +  ++ 
Sbjct: 200 PLPGVKNGRKLEKLGYKGIDSGEFIFEDYECDAELSLVGGKEGEGFFMATGGLEIGRINV 259

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  SV   R +L E++ Y++ R   G  + +   ++  + ++A    A+  L    A ++
Sbjct: 260 AARSVGIARRALRESVQYSQLRKTMGKPICEHQAIQLKLGEMAAKTRASELLVQDAAAAY 319

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A       KY+  + A  V  EAM   GG GY +E  I R YR++P  
Sbjct: 320 DRGDRVDMEAGMA-------KYFASETAVEVATEAMRIHGGYGYSKEYVIERLYRDAPLM 372

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     + +   L K
Sbjct: 373 CIGEGTNEMQRIIIAKQLVK 392


>gi|330501553|ref|YP_004378422.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915839|gb|AEB56670.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 601

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/455 (17%), Positives = 159/455 (34%), Gaps = 64/455 (14%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     LR     G   +  D     +             +  A +        ++  A+
Sbjct: 76  PEVEPALRAFHEAGFLNATRDFEHGGMQLPNLLSQACFAHFQSANIATSSYSMLTMGVAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++           +   I    +  T             + LTE   G+ ++ + ++ + 
Sbjct: 136 LIEAFGNEEQKSRYLQPIIDGRFFGT-------------MALTEPHAGSSLSDLRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPM-----SDAFIMLAQVEG------RVGCFLVPRLLED----- 264
             DG Y + G+K F+S        +   ++LA++         +  FLVP+   +     
Sbjct: 183 HVDGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPPGVKGISLFLVPKFHVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHAGLSYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + ++         ++ YAR R                 +++   ++R +      +  A 
Sbjct: 303 MGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPSSPQISIVEHADVRRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+      A+ R+       ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDTHTLETAEDRTRALELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             E  + ++YR++  N I  G+     LD+L                + Q+ G++ K+++
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG-------------RKVSQNGGAALKQLL 469

Query: 485 TILRDSISLCKEDKGLA--RFLTEKIALASSAAAL 517
            ++ D      E + L   R   E++     A  L
Sbjct: 470 KLINDCCQRASEHESLTSLRQPLEQLLARLQAVTL 504


>gi|302524361|ref|ZP_07276703.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302433256|gb|EFL05072.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score =  240 bits (612), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 124/384 (32%), Gaps = 34/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  +  + +PA   ++      GL        +  +                  +  
Sbjct: 31  PHAQALEHADEYPA--EIVEGMKEMGLFGLTIPEEYGGLGESLLTYALVVEEIARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T    + + P++ + E             V     ++E   G
Sbjct: 89  SGVINTHFIVAHMITRHGTAEQKQHFLPRMATGE-------------VRGSFSMSEPDLG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGS 266
           +D+AAI ++ ++  D         W  +   S+   +L + +         +   L +  
Sbjct: 136 SDVAAIKTRARRDGDDYVIDGAKMWLTNGGSSNLIALLVKTDEGAEKAHQNLTTFLVEKP 195

Query: 267 P------NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILI 316
                   GL      +K+G +   T E  F          L          + D   + 
Sbjct: 196 SGFGEVLPGLTIPGKIDKMGYKGVDTTEAVFDGFKIGAGKVLGEAPGKGFSYMMDGVEVG 255

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  +      S   AI YA++R   G  +     +   +A++A  + AA  +    
Sbjct: 256 RVNVAARACGIAIRSFELAIAYAQQRSTFGKPIAQHQAIAFKLAEMATKVEAAHLMMVNA 315

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D       EA  A+++A        +    V  EA    GG GY +E  I R  RE
Sbjct: 316 ARLKDSGARNDVEAGMAKLIA-------SEYCAEVTQEAFRIHGGYGYSKEYEIERLMRE 368

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +P   I  G+       +   L +
Sbjct: 369 APFLLIGEGTSEIQKTIISRGLLR 392


>gi|54024525|ref|YP_118767.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54016033|dbj|BAD57403.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 381

 Score =  240 bits (612), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 81/366 (22%), Positives = 133/366 (36%), Gaps = 29/366 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           HP  H L  R+   GL C+     +       AH+        +A   A  +   S   A
Sbjct: 38  HPDRH-LYNRAGELGLLCTAIPAEYGGGGGTFAHEAAIIEEQTLAGDGALGMPVHSSIIA 96

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +A   +  + +   PK  S E               + +G+TE   G+D+  I ++  
Sbjct: 97  PYLAEFGSEELKRRVLPKAASGEM-------------VLSIGMTEPGTGSDLQNIKTRAV 143

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLL--EDGSPNGLCYQRLK 276
           +  D  Y ++G K F+++    D  I+ A+ +   G   V  +         G    R+ 
Sbjct: 144 REGDE-YVITGSKIFITNGWLCDGIIIAAKTDPTKGAAGVSLIFAEVGDDTPGFTRGRIL 202

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE-DMKIL---IYLDSAIMSVSGMRVSL 332
           +KIG +   T EL F          L  + G     M  L     L +A+++V  M  ++
Sbjct: 203 SKIGGKGQDTAELFFDGLRVPASNLLGEAEGQGFYQMMQLLAQERLVTAVIAVPMMEKAV 262

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y + R   G  L      K  +A+ A     A           D+A  +      
Sbjct: 263 QLTVEYTKGREAFGKPLYAMQNTKFELAECATIARVARTF-------LDDAIVKHLRGEL 315

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A +TKYW       V+   ++  GG GY+ E  I++ Y  +    IL GS   M  
Sbjct: 316 DIPTAAMTKYWITDQLGGVVDRCLQLFGGYGYMTEYPISQLYTGARVLRILAGSNEVMKD 375

Query: 453 DVLNLL 458
            +   L
Sbjct: 376 LIARSL 381


>gi|160874881|ref|YP_001554197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS195]
 gi|160860403|gb|ABX48937.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195]
 gi|315267117|gb|ADT93970.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS678]
          Length = 596

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 93/547 (17%), Positives = 198/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSIGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +G      PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++ A        A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI +  + +  R+S    I  G+     LD++   LL       +Q   
Sbjct: 409 VDAQQVFGGHGYIHDWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSV 468

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYRAGM 522
            + + + S      +   +   +    + +  + +L  + A       A+S A L   G+
Sbjct: 469 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLAAQAATNPDIIGAASMAYLELFGV 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|330972659|gb|EGH72725.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 600

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 87/505 (17%), Positives = 176/505 (34%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            +    P     +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYEK--------GEAILIPEVKPAVDAFIAAGFLNASRDFDVGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++    +    + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   +G Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPAGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   + + ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLIANTCERAQAHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|308488991|ref|XP_003106689.1| CRE-ACDH-7 protein [Caenorhabditis remanei]
 gi|308253343|gb|EFO97295.1| CRE-ACDH-7 protein [Caenorhabditis remanei]
          Length = 455

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 134/398 (33%), Gaps = 44/398 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P    +++++   G   +    ++  +          +          
Sbjct: 92  PVAAEYDRTMEYP--WPIIKKAHAQGYLIADIPEAYGGLGVDMVSNCIISEEMAYGCSGI 149

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  + + + L     + K +  ++    +                  +TE   G
Sbjct: 150 ATAIMANDLALTPLILCANDDIKKRFLGRMVENPF-------------VASYAVTEPGAG 196

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+A I ++ +K  D         W  ++  ++ F +LA+ +              + +G
Sbjct: 197 SDVAGIKTKCEKKGDEYILNGSKMWITNAGHANWFFVLARSDPNPKTPAGKAFTAFVVEG 256

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              GL   R +  +G R + T  + F +         NV   P E  K+ +   D    +
Sbjct: 257 DSPGLTRGRKEINMGQRCSDTRGVTFEDVRVPA---ANVVGAPGEGFKVAMKTFDKTRPT 313

Query: 325 VSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+ +        L  A  Y+  R   G  + +   +   +A++A++   A  ++++    
Sbjct: 314 VAALATGVTYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINAELARLMTYKSGAE 373

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  S         A I K +           A++  GG+G+  E    +  R++  
Sbjct: 374 VDAGRPGS-------YYASIAKLFASDAVNQAATNAVQVFGGAGFNTEYPAEKLMRDAKI 426

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             I  G+     + +            QL + + Q+ G
Sbjct: 427 FQIYEGTSQIQRMVIAR----------QLLARVAQNGG 454


>gi|118619971|ref|YP_908303.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium ulcerans Agy99]
 gi|118572081|gb|ABL06832.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium ulcerans Agy99]
          Length = 403

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 135/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +  + + V       + A           
Sbjct: 28  PAAAEWDEREETP--WPVIQEATKVGLYSPDF-FAQQSVEPSGVGILAAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP     W P++F    DP                 +E   G
Sbjct: 85  AISIMGTGLAAAALAANGTPEQLGRWLPEMFGTPGDP----------KLGAFCSSEPGAG 134

Query: 209 TDIAAITSQGQ-KISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++     + G + L+G K +  +  +++  I++  V   +G       +    
Sbjct: 135 SDVGAIRTRAHFDEAAGEWVLNGTKTWATNGGIANVHIVVVSVHPELGTRGQATFVIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------------STGPVED 311
             GL   +   K G R++ T E+   N        L                 S      
Sbjct: 195 TKGLTQGQKFKKHGIRASHTAEVVLDNVRLPEDAILGGREKFETRIARVKSGASARGQAA 254

Query: 312 MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA
Sbjct: 255 MKTFERTRPTVGAMAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKARIDAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R         +             + K    + A  V  EA++ +GG+GY  +  
Sbjct: 315 RLLVWRAGWMARNNHNFDSA------EGSMAKLVASETAVYVTDEAIQILGGNGYTRDYP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   L
Sbjct: 369 VERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|126739624|ref|ZP_01755316.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719270|gb|EBA15980.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 380

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 148/376 (39%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+    P    L ++    G+     D  F  +       +RAA    MA+  A
Sbjct: 27  PYCDDWDEAGEIP--WELHQKVGDFGVWGFGIDEKFGGLGFDDCF-LRAAYSEEMARCGA 83

Query: 149 GHL---MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G +   M+    S   +A +    + +   P+I S E                 LG+TE 
Sbjct: 84  GGVTAAMAGRTISVEPIARLACDEIRERVLPEILSGE-------------KGSSLGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D+A + +  ++  +  + L+G K F++  M+  + ++    G  G   +     + 
Sbjct: 131 GGGSDVANLKTTARRDGNH-WVLNGSKTFITGGMTSDYFVIPARTGGKGLAGISLFFVEA 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G     L  K+G   +    L           ++G+       + +   +  L+   
Sbjct: 190 DTAGFSRSPLPRKMGWWCSDQATLYLDEVRVPASHMMGEEGTGFLAIMNNFNMERLNLIA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L ++I +A+ R   G  LI+  V++  IA+++  I A  AL   +    +E
Sbjct: 250 AVLGMMKACLEDSIAWAQDRETFGQKLIEHQVIRHKIAEMSARIDAVEALLRMICWQVNE 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    E + A+  A     +C        +EAM+ +GG+GY+    + R YRE    +I
Sbjct: 310 GEMPVAELSKAKFFATKACEFC-------ASEAMQILGGAGYLRGNRVERIYREVKVMAI 362

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M    +  +
Sbjct: 363 GGGSEEIMRDLAVRQM 378


>gi|110639955|ref|YP_680165.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282636|gb|ABG60822.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 597

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 87/451 (19%), Positives = 163/451 (36%), Gaps = 54/451 (11%)

Query: 70  AQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             ++AR  +A    P L             +       LL ++   GL  +     +E  
Sbjct: 40  MADMARDFLATEVHPILDRIDA--------QEPGLMEKLLEKAGELGLLATSIPEQYEGF 91

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            +     +    +       A  L + +      +    T    K + PK+ S E+    
Sbjct: 92  GKDFNTSLLLTEIVGAGHSFAVALAAHTGIGTLPILYFGTEEQKKKYLPKLASGEWK--- 148

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIM 245
                         LTE   G+D  A  ++    +DG  Y L+G K W  ++  +D FI+
Sbjct: 149 ----------ASYCLTEPGSGSDALAAKTKAVLSADGSHYILNGQKMWITNAGFADTFIV 198

Query: 246 LAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
            AQ++G     F+V +        G+     ++K+G + ++T ++ F++        L  
Sbjct: 199 FAQIDGDKFTGFIVEKG------EGVTLGNEEHKMGIKGSSTRQVFFNDCKVPKENVLGE 252

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +  G +    IL    +  A  ++ G       +I YA+ R      + +   ++  +A+
Sbjct: 253 IGKGHLIAFNILNIGRIKLAAAALGGSTRVSTLSIQYAKERIQFKQPIANFGAIQYKLAE 312

Query: 362 IALDIAAATALSFRLANSFDEAKS-------RSEEAAYAR-----IMAPITKYWCCKMAP 409
            A+ I    +  +R      +A+          EEA  A      I   + K    +   
Sbjct: 313 QAIKIYTVQSAMYRAGQGIQDAEEELVKQGKTYEEALLAAAQEYAIECAMLKVAGSETLD 372

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            V  E ++ +GG G+  +  + R YR+S  N I  G+     +  +++  K     + + 
Sbjct: 373 YVSDEGVQILGGYGFSADYPMDRSYRDSRINRIFEGTNEINRMLTMDMFLK-----KAMK 427

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGL 500
             L  DL      V   L        ED+GL
Sbjct: 428 GEL--DLMGPAMAVQKELMAIPDFGAEDEGL 456


>gi|26986902|ref|NP_742327.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24981507|gb|AAN65791.1|AE016205_4 glutaryl-CoA dehydrogenase [Pseudomonas putida KT2440]
          Length = 393

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|167644385|ref|YP_001682048.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167346815|gb|ABZ69550.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 382

 Score =  239 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 129/364 (35%), Gaps = 25/364 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A++      GL       ++  +    +   +    L  ++      + +     +  + 
Sbjct: 39  AIIAEMRALGLFGLSIPEAYGGLGLSMEEEALVVIELGRVSPAFRSVVGTNVGIGSQGLV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T      W P + S E                   LTE   G+D AA+ ++  +  +
Sbjct: 99  MAGTQAQKAAWLPGMASGE-------------TIASFALTEAEAGSDSAAVRTRAVRDGE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++  +  F ++A+ +  R G   V   L      GL     + K+G +
Sbjct: 146 DYVLNGAKRFITNASRASVFTVMARTDPNRAGASGVSAFLVPRQTPGLSIGPPEKKMGQQ 205

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
                ++ F +        L     G    M++L    L  A + V      +A+++ YA
Sbjct: 206 GAHIHDVVFEDVRVPASLRLGAEGEGFKLAMRVLDRGRLHIAAVCVGVAERLIADSVAYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +  +++  IAD   +  AA AL F  A   D     + EAA        
Sbjct: 266 LERKQFGRPIAEFQMIQAMIADSKTEALAARALLFESARQRDAGDDVTLEAA-------A 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           TK +  +M   V   A++  GG+GY+ +  I R YR+     I  GS     L +     
Sbjct: 319 TKLFASEMVGRVADRAVQIFGGAGYVADYGIERFYRDVRIFRIYEGSSQIQQLVIARETL 378

Query: 460 KGTN 463
           K   
Sbjct: 379 KRGA 382


>gi|218779149|ref|YP_002430467.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760533|gb|ACL02999.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 79/509 (15%), Positives = 181/509 (35%), Gaps = 67/509 (13%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P+L           +V+ HP    +++     G   S +   +            +  +
Sbjct: 64  PPELVD--------GEVKVHPKVKEIMKECGEGGWIASNFPLEYGGDQFPLTLTNMSRFI 115

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +  A   A      +  +A ++       + + +  K+   E+  T             +
Sbjct: 116 FAAANYSASVYSDANAGAAHLIISFGDKALQETYLDKLIQGEWQGT-------------M 162

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VG 254
            LTE + G+ ++ IT+      +G Y + GHK F+S    D       +MLA+++G   G
Sbjct: 163 ALTEPQAGSSLSDITTTAYPTDEGYYKIRGHKIFISGGDHDALDNIVHLMLARIDGAPAG 222

Query: 255 CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDL 302
              +   +              N +    + +K+G +     EL   E ++  G+L+G+ 
Sbjct: 223 TKGISLFVVPKKRVEPDGSLVFNDIVCSSVYHKLGYKGMPLTELSIGEKNDCRGYLIGEP 282

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILID 351
           +     +  M     ++  + +      +   ++ YAR R                 +I+
Sbjct: 283 HKGLKCMFQMMNEARIEVGLGAAGIATAAYYASLEYARDRPQGRKITEKDPTQPQTPIIN 342

Query: 352 QPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              +KR +      +  +        + + LA   D  + + +      I+ PI K +  
Sbjct: 343 HADVKRMLLLQRSIVEGSLSLLTQCGMYYDLALVADNEEDKEKYHLLLEILTPIAKSFPS 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT 462
           +M    ++  ++C GG GY ++  + ++YR+   + I  G+     +D+L    L++ G 
Sbjct: 403 EMGVLSVSNGLQCFGGYGYCDDFPLEQYYRDIRIHPIHEGATGIQAMDLLGRKVLMKNGK 462

Query: 463 NLF---EQLFSTLEQDLG-----SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
                 +++  T++   G         ++   +     +     G+A+    ++ LA ++
Sbjct: 463 ASMFYNQEVQKTIDVAKGVKSLEPYAVRLDEAMHQLQQVTMHLLGVAQEDGPEVFLADAS 522

Query: 515 AALYRAGMNDIADVFLENRFLDNCHSTHC 543
             L   G   +   +L           + 
Sbjct: 523 LYLEYFGRIAVGWQWLLQGIAAQTKLENG 551


>gi|288919069|ref|ZP_06413409.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349509|gb|EFC83746.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 384

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 119/366 (32%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G+        +                     +     M      A +++ 
Sbjct: 38  RLIEQMKELGVFGLAVPEPYGFGKVSTPCYAMVTEELARGWMSLAGAMGGHSVVAKLIST 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + +              ++   + LTE  GG+D+ A+ +  +   DG
Sbjct: 98  FGTDEQKERYLPSMATG-------------ALRATMALTEPGGGSDLQAMRTVARADGDG 144

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S    +L + +         +  LL +    G    R   K+G +
Sbjct: 145 YLINGSKTWITNARRSGLVALLCRTDPAATPAHRGMSILLVER-VEGYTVSRDLPKLGYK 203

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F +        L G        +     +  +  A  +    R +  +A+ Y
Sbjct: 204 GVESCELVFDDARVPATALLGGVEGRGFTQMMTGLEIGRIQVAARATGVARAAFDDALRY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+   I AA  L    A   D  +    EA  A     
Sbjct: 264 AQERESFGQPIWRHQSIGNYLADMGTKITAARQLLLYAARRHDSGERCDMEAGMA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  V   A+   GG GY  E  + R++R++P   +  G+       ++  L
Sbjct: 319 --KLFASETAMEVALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIVGQL 376

Query: 459 EKGTNL 464
            +   L
Sbjct: 377 IRRGGL 382


>gi|311742051|ref|ZP_07715861.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311314544|gb|EFQ84451.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 384

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 139/375 (37%), Gaps = 26/375 (6%)

Query: 95  DKVEFH-PAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           D++  H P W         L  ++   G     +D +                  + A  
Sbjct: 23  DQIVPHLPTWEDEGRLPRELHAQAAKAGFLGVGFDEAVGGDGGDLVDGSIVTEAIVQAGG 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G L S      S+      P +       +  R   PT             LG+TE  
Sbjct: 83  STGVLASLFTHGISL------PHIIDSGNADLIDRYVRPTL-----AGETIGSLGVTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+A I ++  +  D  Y ++G K F++S +   F+      G  G   +  L+ D  
Sbjct: 132 GGSDVANIRTKAVRDDDH-YVVNGAKTFITSGVRADFVTTVVRTGGEGYGGISLLVIDKD 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G        K+G   + T EL F +       L+G+ N     V    +   L  A+ 
Sbjct: 191 APGFTVTGPLRKMGWHCSDTAELSFEDVRVPAENLVGEENGGFVLVMQQFVNERLGLAVQ 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +  + +   A+ YAR+R   G  LI + V++  + D+    AAA AL+ +      + 
Sbjct: 251 AYATAQRATDLAVEYARQRETFGKPLITRQVIRHKLVDMQRRTAAARALTRQAVERSIDG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +           A + K    +    V+ EA++  GG GY+ E  I RHYR++    I 
Sbjct: 311 STTDPSIILD---AVLAKNTAVEAVEHVVTEAVQIFGGMGYMRESEIDRHYRDARIIGIG 367

Query: 444 LGSGNAMVLDVLNLL 458
            G+   +      LL
Sbjct: 368 GGATEVLNDLAAKLL 382


>gi|256784066|ref|ZP_05522497.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289767947|ref|ZP_06527325.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289698146|gb|EFD65575.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 401

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQDIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    +     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDIRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+  +  +         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 SSKAVRDGEEYVLNGQKMWLTNGGTSSLVAVLVKSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELVMDGLRIPANRVLGGVTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVRYAQQRHTFGKQIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|317483816|ref|ZP_07942756.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila
           wadsworthia 3_1_6]
 gi|316924919|gb|EFV46065.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila
           wadsworthia 3_1_6]
          Length = 371

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 133/379 (35%), Gaps = 35/379 (9%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLM 143
               P  ER D+          +R     G     +              +R   RL  +
Sbjct: 15  RTVRPMAERCDEESLFCG--ESVRALADAGFMGLPYPPKLGGRGSSYESYVRCVERLSKV 72

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                    +    +   +    +P   + +               PM +        LT
Sbjct: 73  CPSVGVTYATHVGLACHPLHAFGSPMQKESFL-------------RPMLRGDKLGAFALT 119

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+ AI +  +    G Y ++GHK F+++   +D +I+ A+  G  G   +   +
Sbjct: 120 EPEAGSDVGAIATTAELDG-GFYVINGHKIFITNAGRADIYILFART-GGQGTEGLSAFV 177

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSA 321
                 GL     + K+G R   T EL   N          +   P +  +I +  LD  
Sbjct: 178 VCSDDAGLLISAPQRKMGIRGAQTCELFLRNLCIPAD---RLIGRPGDGFRIAMETLDGG 234

Query: 322 IMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   V +A     EA    + R   G  L     ++   AD+   + AA  L+   
Sbjct: 235 RLGIAAQAVGIADAAFDEACVRLKERRQFGRTLEHFQGLRWKAADMWAKVEAARQLTLYA 294

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  K    EA+ A+++A     WC        +EA++  GGSGY++     R YR+
Sbjct: 295 ARLRDGGKRFRAEASAAKLVASEAAVWC-------ASEAVQICGGSGYLQGSVAERLYRD 347

Query: 437 SPANSILLGSGNAMVLDVL 455
           +    I  G+     + + 
Sbjct: 348 AKITQIYEGTSEVQRMVIA 366


>gi|308493545|ref|XP_003108962.1| CRE-ACDH-2 protein [Caenorhabditis remanei]
 gi|308247519|gb|EFO91471.1| CRE-ACDH-2 protein [Caenorhabditis remanei]
          Length = 425

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 141/385 (36%), Gaps = 37/385 (9%)

Query: 98  EFHPAWHALLRRS-IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
              P    + R + +   L  + +D     +   + +    +  +         +++   
Sbjct: 50  RVKPLVKEMDRNAKLDKNLLKAAFDSKLMGLEIDEKYGGSGSSFF-------ETILTVEE 102

Query: 157 TSASMVALMTTPRVHKDWAPKIFS---REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    A   T  +       + S    E           T+      L+E   G+D  A
Sbjct: 103 LSKIDPAFALTIHLQNALIAPMLSEYGNEEQKEKYLKKVCTNSIGSFALSETVSGSDAFA 162

Query: 214 ITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +   K ++    ++G KW   ++P++D F++LA  E   G   +   L D    G+  
Sbjct: 163 MKTTATKDNNDF-LINGSKWGISNAPIADFFLVLANAEPEKGYRGITCFLIDRDQEGVVV 221

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIY-----------LDS 320
               + +G R+  T ++ F+N        +     G +    ILI+           L++
Sbjct: 222 GEQDDNLGMRAGTTAQVHFNNVRVPKSSIVGEYGKGCLYLRIILIFVFIGYKYAIDILNA 281

Query: 321 AIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           + + +    V LA+        Y R R   G  LID   ++  IA +  +I AA  + + 
Sbjct: 282 SRILIGAQMVGLAQGCFDQTIPYLRERKQFGSRLIDFQGLQHQIAKVGTEIEAARLMVYN 341

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D      + A+ A+  AP       KM        +E +GG G+ +E S  + YR
Sbjct: 342 SARMKDCGFPFVKAASMAKYYAPEVACKTTKM-------CIEWLGGRGFTKEFSAEKFYR 394

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+ N  +  +   ++ 
Sbjct: 395 DAVVGGIYEGTSNIQLNTIAKFIDN 419


>gi|21224773|ref|NP_630552.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|4154064|emb|CAA22717.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 401

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPQDIVDGLKELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T      + P+             M    +     ++E   G+D++AI
Sbjct: 95  HFIVAYMLKQHGTQEQKDHFLPR-------------MAAGDIRGAFSMSEPALGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           +S+  +  +         W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 SSKAVRDGEEYVLNGQKMWLTNGGTSSLVAVLVKSDEGHPEGTAPHKSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLD 319
                GL      +K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIDKMGYKGVDTTELIMDGLRIPANRVLGGVTGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       + +    + YA++RH  G  +     ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVAQRAFELGVRYAQQRHTFGKQIAQHQAIQFKLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ +A    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLA-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|126665781|ref|ZP_01736762.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
 gi|126629715|gb|EBA00332.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17]
          Length = 600

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 101/546 (18%), Positives = 194/546 (35%), Gaps = 77/546 (14%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
            +     + L+   E  L   A+E A   R+ +   P+            +V+  P    
Sbjct: 29  RYSDHSRETLQAALELALKVAAEEFAPHARLVDEEEPRFEN--------GRVKMRPEVKK 80

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            L      GL  +  D     +    A       +   A +        ++ +A+++ + 
Sbjct: 81  ALGVLRDTGLMAAGQDYHRGGMQLPAAVAQMCVGMLKGANVGTQGYAGLTIAAANLIMVQ 140

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +P     +A              PM        + LTE + G+ +  + ++ +   DG 
Sbjct: 141 GSPEQQVRFAE-------------PMMAGRFFGTMCLTEPQAGSSLGDLRTRAEPQPDGT 187

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNG 269
           Y L G+K ++S    +       ++LA++ G       +  FLVP++L +     G  N 
Sbjct: 188 YRLFGNKIYISGGDHELSENIIHMVLARLPGAPLGVKGISLFLVPKILVNEDGSLGERND 247

Query: 270 LCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +    L +K+G R   +  L F       G+L+G+ N     +  M     +   + SV 
Sbjct: 248 VALAGLIHKMGYRGTTSTMLNFGEKDGAAGYLVGEANNGLAAMFHMMNEARIGVGLGSVM 307

Query: 327 GMRVSLAEAIHYARRRHVSGGILID------------QPVMKRAIADIALDIAAATALSF 374
                   A+ YAR R   G  + +             P ++R +      +    AL  
Sbjct: 308 LGYTGYLHALEYARERRQ-GRPIGEKDPSAPQVPLIRHPDIRRMLLAQKSYVEGGLALCL 366

Query: 375 RLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A   DE K       R+  A    ++ P+ K W  +      + A++  GG GY  E 
Sbjct: 367 QGAMLVDEKKLAATDDQRNLAAGLLDLLTPVIKSWPSRYCLEANSLAIQVHGGYGYTREY 426

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            + + YR++  N I  G+     +D+L       G   +++L   L+  + ++ ++  + 
Sbjct: 427 PVEQFYRDNRLNQIHEGTHGIQGIDLLGRKVSMAGGRFYKELMLRLDATIAAARQE--SR 484

Query: 487 LRDSISLCKEDKGLARFLTEKI-----------ALASSAAALYRAGMNDIADVFLENRFL 535
           L +S    ++        TE I           ALA++   L   G   +  ++L     
Sbjct: 485 LAESADRLEQAMKAITDATEVINGEKTKGEKEKALANATLYLDAFGQVVVGWLWLRQGLA 544

Query: 536 DNCHST 541
                 
Sbjct: 545 AIAGLA 550


>gi|167573898|ref|ZP_02366772.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 390

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 138/378 (36%), Gaps = 27/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    L  ++   GL    +  ++  V            + L      
Sbjct: 32  PYVNDWDEAGEFP--RELYEKAARIGLIGIGFPDAYGGVEDVDMFHRLICSIELARCGAG 89

Query: 149 GHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G + S    +  A  +    +  +     P I +                   L +TE  
Sbjct: 90  GVVSSLMSHTIGAPPIVHAGSDELKARVLPGILAG-------------RKISALAITEPG 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLED 264
           GG+D+AA+ ++  +   G Y +SG K F++S + +D + +  + +    G   +  LL +
Sbjct: 137 GGSDVAALRTRAVRDG-GHYVVSGAKVFITSGIRADYYTVAVRTDPSAQGAKGLSLLLVE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
           G   GL    L+ K+G  ++ T  L F +       L+G        V     L     A
Sbjct: 196 GDTPGLSKTPLE-KMGWWASDTAHLRFDDCRVPAANLIGAEGGGFPLVMQNFNLERFSLA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++    V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A   + A   D
Sbjct: 255 ASALGFAEVCYEDALDWARQRRTFGQRIADHQVIRHKLVDMAMRIDATRAWLEQCAWQID 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R   A        + K +  +        A++ +GG GY+      R YRE   N 
Sbjct: 315 HLDKR---APTLVASICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREVKVNM 371

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+   +       LE
Sbjct: 372 IGGGAEEILKDLAARQLE 389


>gi|163793207|ref|ZP_02187183.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181853|gb|EDP66365.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 410

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 138/405 (34%), Gaps = 41/405 (10%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE- 125
             + + R A  +Y   +L        R     FH     ++      G   S     +  
Sbjct: 36  EDERMVRDAARDYCQEKLLPRVREAFR--NEVFH---RDIMNEMGELGFLGSTIGEEYGC 90

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             V    + + A  +  +       +   S      +    +    + + PK+ + E+  
Sbjct: 91  AGVNYVCYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRRKYLPKLATGEW-- 148

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D   + ++  K   G        W  +SP++D F++
Sbjct: 149 -----------VGCFGLTEPDHGSDPGGMKTRAVKADGGYLVSGAKMWITNSPIADVFVV 197

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +  V    +   + +    GL   +++ K   R++ T E+     F     + N+ 
Sbjct: 198 WAKTDDGV----IRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDGVFVP---EENLL 250

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIA 360
                       L+ A   +S   +  AEA  +A R     R   G  L    ++++ +A
Sbjct: 251 PNVKGLSGPFGCLNKARYGISWGALGAAEACWHASRQYTLDRKQFGRPLAANQLIQKKLA 310

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I        RL    DE ++  E          + K   C  +  +   A +  G
Sbjct: 311 DMQTEITLGLQSCLRLGRLMDEGRAAPEA-------ISLCKRNSCGKSLDIARMARDMHG 363

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           G+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 364 GNGVSDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 407


>gi|121609169|ref|YP_996976.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553809|gb|ABM57958.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 382

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 145/374 (38%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  ++WD+    P   AL  ++   GL    + + +  V      ++             
Sbjct: 31  PHADQWDEAGSFP--RALYHKAAQAGLLQPGFPQDYGGVPCDAFFRMILCEERAWGGSGG 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +      A  +A+  +  +     P I S                   L +TE   
Sbjct: 89  VASGLFSHTIGAPPIAVAGSQALKARVLPGILSG-------------QKISALAITEPSC 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A +T+  ++     Y ++G K F++  M   ++ +A   G  G   +  LL DG  
Sbjct: 136 GSDVAQLTTTARRAG-AFYIVNGGKTFITCGMRADYLTVAVRTGGPGAGGISLLLVDGDT 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL    LK K+G  +  T EL F +       L+G  +   G +        L  A  +
Sbjct: 195 PGLARSPLK-KMGWWACDTAELFFQDCRVPAANLIGAQDQGFGVLMHNFTQERLALAAAA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               RV L +A+ +AR+RH  G  L    V++  + D+A  I A   L   +A   D+ +
Sbjct: 254 CGYARVCLHDALEWARQRHTFGQPLAQHQVIRHKLVDMATRIEATRTLLDDVAARLDDGQ 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S   + A A+  A  T  +C         +A++ +GG G +    + R YRE+   +I  
Sbjct: 314 SPVAQIAMAKNFAAQTFQFC-------ADQAVQILGGMGLMRGTRVERLYREAKIMAIGG 366

Query: 445 GSGNAMVLDVLNLL 458
           G+   M   +   L
Sbjct: 367 GAQEVMKELIAKRL 380


>gi|326383715|ref|ZP_08205400.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197479|gb|EGD54668.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 382

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 132/374 (35%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+ +  P  + ++ +    GL    +   F  +     A  +    L  + Q  A  + +
Sbjct: 30  DEEKSFP--YEVVAQMGEMGLFGLPFSEEFGGMGGDYFALALALEELGKVDQSVAITVEA 87

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    T    + W P + +                  G GLTE   G+D  A
Sbjct: 88  GVGLGAMPIYRFGTQEQKETWLPDLLAG-------------RKLAGFGLTEPGAGSDAGA 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNG 269
             +  ++  D      G K F+++  +D    + +  V G+   G   +  ++      G
Sbjct: 135 TATTAREDGDEWVINGG-KQFITNSGTDITSLVTVTAVTGQRDNGRKEISTIIVPSGTPG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              +   NK+G  ++ T  L F +        L        +   L  LD   ++++G+ 
Sbjct: 194 FTAEPAYNKVGWNASDTHPLSFDDARVPRENLLGERGRGYANF--LSILDEGRIAIAGLA 251

Query: 330 VSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             +A+        YAR R   G  + +   +  AIA +      A    +  A      +
Sbjct: 252 TGVAQGCVDESIKYARERKSFGKAIAEFQSVSFAIARMEARAHVARMAYYDAAAKMLAGQ 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA       I K    + A      A +  GG G++ E  +ARHYR+S    I  
Sbjct: 312 PFKKEAA-------IAKMVSSEAAMDNARMATQIHGGYGFMNEYPVARHYRDSKILEIGE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+    ++ +   L
Sbjct: 365 GTTEVQLMLIARAL 378


>gi|315503371|ref|YP_004082258.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409990|gb|ADU08107.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 379

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 140/378 (37%), Gaps = 34/378 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P   +L   +   GL    +  S                  L + +    ++
Sbjct: 30  DWERAGEVP--RSLHETAAKIGLLGIGFPESVGGSGGD----------LLDSMVVTEEII 77

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDP---TNKAPMQKTSVAIGLGLTEKRGGT 209
               +S  + AL T    H    P +   + +        P+   ++   L +TE  GG+
Sbjct: 78  RSGGSSGLVAALFT----HGIALPHMVETQDEGLIDKYVRPVLAGTMIGALAITEPDGGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A I +   +  D  Y ++G K +++S +   F+  A      G   V  L+ D    G
Sbjct: 134 DVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVCTEFPGSGSVSLLVIDKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVS 326
               R   K+G   + T EL F +    +   +         +        L  A  + +
Sbjct: 193 FTVGRRLEKLGWHCSDTAELSFVDVRVPVTNRVGPEDTGFLAIMQQFANERLSLATQAYA 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  A+ + R R   G  L+ + V++  +A++     AA A    +A      +  
Sbjct: 253 TAQRCVDLAVQWCRDRQTFGRPLVGRQVVRHKLAEMHSRTDAARAYVHDVAERVAAGQPV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E A A+ +A  T  W       V+  A++  GG GY+ +  + RHYR++    I  G+
Sbjct: 313 VTEVAMAKNVAVATCDW-------VVDAALQLHGGFGYMRDAEVERHYRDARLLGIGGGT 365

Query: 447 GNAMVLDVLNLLEKGTNL 464
              M      ++ KG  L
Sbjct: 366 TEIM----NEIIAKGMGL 379


>gi|145224411|ref|YP_001135089.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145216897|gb|ABP46301.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 403

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 131/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R +   GL+   +              I A           
Sbjct: 28  PAAAEWDEREETP--WPIIREAAKVGLYSMEFFAEQAAEP-SGLGMIVAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ VA   TP    +W P++F    DP                 +E   G
Sbjct: 85  ALAILGTGLAAASVAANGTPEQVGEWVPQMFGSVDDP----------KVAAFCSSEPNAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ +I ++ +     D         W  +  +++  +++A V   +G       +    
Sbjct: 135 SDVGSILTRARYDEATDEWVLNGTKTWATNGGIANVHVVVASVYPELGTRGQVSFIIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----------- 315
             GL   +   K G R++ T E+   +      G + V      D +I            
Sbjct: 195 TKGLSQGQKFLKHGIRASHTAEVVLDDVRIP--GRMIVGGKERFDARIAKVREGKKAAGQ 252

Query: 316 --------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                          M+V   R +   A  YA  R   G  + +   +   +AD+   I 
Sbjct: 253 AAMATFERTRPTVGAMAVGVARAAFEYARDYACEREQFGRKIGEFQGVAFKLADMKARID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        K      A+      + K    + A  V  EA++ +GG+GY  E
Sbjct: 313 AARLLVYRAGWMARNGK------AFESAEGSMAKLVASETAVYVTDEAIQILGGNGYTRE 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L +   +
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVMARAI 397


>gi|226308408|ref|YP_002768368.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187525|dbj|BAH35629.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 130/323 (40%), Gaps = 28/323 (8%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +  GH    +      +  +      + W P I + E               + + +T
Sbjct: 81  AAVSFGHYTVSTGIVLPYLLRLANEEQKQRWLPSIATGE-------------KTLCIAMT 127

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLV 258
           E   G+D+A I +  +   DG  Y L+G K F++  + S+  +++A+          F +
Sbjct: 128 EPGTGSDLAGIRTTAKLSDDGTHYILNGAKTFITGAVNSELCVVVARTSAPAEDDRRFGL 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             ++      G  Y R   K+G R++ T EL F++       LLG+ +     +      
Sbjct: 188 SLMVVPTDAPGFEYGRKLEKLGLRASDTSELSFTDVKVPVADLLGEQDKGFSYLGQNLPR 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L      V+  R ++  A  Y + R V G  +      K  +A+ + ++ AA AL+ R
Sbjct: 248 ERLSIGSRGVASARAAIEFAKAYVQERQVFGKPVAAFQNTKFVLAECSAEVEAAQALADR 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D  +  + +AA         K +  ++A  VI + ++  GG GY+ E  IAR Y 
Sbjct: 308 GIELDDSGELTAADAAR-------IKLFGTEVAARVIDKCLQLHGGYGYMLEYPIARLYA 360

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++  + I  G+   M   +   +
Sbjct: 361 DTRVSRIYGGTSEVMKTIIAKDM 383


>gi|183984001|ref|YP_001852292.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183177327|gb|ACC42437.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 397

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 133/377 (35%), Gaps = 34/377 (9%)

Query: 96  KVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E   A+ H ++ +    GL   +    +  +                  +    +++ 
Sbjct: 35  ELERKDAYPHEIVEQMRSIGLFGLMIPEQYGGLGESLLTYALCVEELARGWMSVSGVLNT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++ + E                   ++E   G+D+AAI
Sbjct: 95  HFIVAYMLRQHGTEEQRQRFLPRMATGE-------------SRGAFSMSEPELGSDVAAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSP---- 267
            ++  + +DG Y + G K +L++  S   + +L + +         +   L +       
Sbjct: 142 RTRATRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGAAQPHRNLTAFLVEKPTGFGE 201

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              GL      +K+G +   T EL F          L G        + D   +  ++ +
Sbjct: 202 VLPGLTIPGKIDKLGYKGIDTTELIFDGYRATADDILGGTPGQGFFQMMDGIEVGRVNVS 261

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +      +   A+ YA++RH  G  + +   +   +A++A  + AA  +    A   D
Sbjct: 262 ARACGVGLRAFELAVRYAQQRHTFGKPIAEHQAISFQLAEMATKVEAAHLMMVHAARLKD 321

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +     A  A+ +A        +    V  ++    GG GY +E  I R  R++P   
Sbjct: 322 SGERNDVAAGMAKYLA-------SEYCSEVTQQSFRIHGGYGYSKEYEIERLMRDAPFLL 374

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 375 IGEGTSEIQKSIISKRL 391


>gi|255533603|ref|YP_003093975.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255346587|gb|ACU05913.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 596

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 67/434 (15%), Positives = 158/434 (36%), Gaps = 40/434 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+ ++   G+        +    +     +  A +       A  L + +      +   
Sbjct: 67  LMDKAGELGILGVSIPEVYGGFGKNFNTSMLVADVIGAGHSFAVALSAHTGIGTLPILYY 126

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T      + PK+ + E+                  LTE   G+D  +  ++ +   DG 
Sbjct: 127 GTEEQKNKYIPKLGTGEWK-------------AAYCLTEPNSGSDANSGKTKAKLSEDGK 173

Query: 225 -IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +   +D FI+ A+++       +   + +    G+     ++K+G + 
Sbjct: 174 HYLINGQKMWITNGGFADVFIVFAKIDDDE---NLTAFIVEREFGGITMNPEEHKMGIKG 230

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIH 337
           ++T ++ F++    +    N+ +      KI +  L+   + ++   +      +  A++
Sbjct: 231 SSTRQVFFNDCPVPV---ENMLSERQNGFKIAVNILNIGRIKLAAAAIGASKSVIDTAVN 287

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL------------ANSFDEAKS 385
           Y+  R      +     ++  +A++A  + A  + ++R             A   D  K+
Sbjct: 288 YSNERIQFDRQISKYGAIRYKLAEMATKVYAVESANYRAGQNIDDAYDALVAGGMDAGKA 347

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + +      +   I K W  +    V+ E ++  GG G+  E  + R YR++  N I  G
Sbjct: 348 KLKSTEQFAVECAILKVWGSEALDYVVDEGVQIYGGMGFSAEAPMDRAYRDARINRIFEG 407

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     L  ++++ K     E    T    + +    +     +  +L   +K L + L 
Sbjct: 408 TNEINRLLTVDMMLKRAMKGELDLMTPATAVAAELMAIPEFGEEDDTLFAAEKKLIKNL- 466

Query: 506 EKIALASSAAALYR 519
           +K  L  + AA+ +
Sbjct: 467 KKATLMVAGAAVQK 480


>gi|121998275|ref|YP_001003062.1| acyl-CoA dehydrogenase domain-containing protein [Halorhodospira
           halophila SL1]
 gi|121589680|gb|ABM62260.1| acyl-CoA dehydrogenase domain protein [Halorhodospira halophila
           SL1]
          Length = 593

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 89/561 (15%), Positives = 184/561 (32%), Gaps = 73/561 (13%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSI 111
            ++LE +   +L    +E  R+A+     L+      G R +  ++     +    +  +
Sbjct: 27  LQDLEEITPDLLEAVLEEADRLASEVWAPLNQVGDRQGCRMEGGEMRLPEGFTEAYQAFV 86

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G +              +        ++  A +        S  +  ++       + 
Sbjct: 87  EGGWNGINAHPEHGGQGLPEVVATATQEMWHGANMALALAPMLSAGATELLHRHGDEALR 146

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  K+ S E+  T             + LTE + G+D+  +  +     D  Y L G 
Sbjct: 147 ARYLGKLVSGEWTGT-------------MDLTEPQAGSDLGQVKCRAVPDGDA-YRLYGQ 192

Query: 232 KWFLSSPMSDA-----FIMLAQV-EGRVGCFLVPRLLED----------GSPNGLCYQRL 275
           K +++    +A      ++LA+  +   G   +   L            G  N +    L
Sbjct: 193 KTYITWGEHEAAENIIHLVLARTPDAPEGHRGISLFLVPKYRVAEDGSLGVRNDVHCTAL 252

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           ++K+G   + T  + + +     G+L+G+       +  M         + SV     + 
Sbjct: 253 EHKLGIHGSPTCTISYGDSEGAVGYLVGEPCRGLNHMFTMMNEARHKVGVQSVGVAERAY 312

Query: 333 AEAIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381
            +A+ +AR R             ++  P ++R++  +     A  AL+   A   D    
Sbjct: 313 QQALAFARDRVQGRRPGGKASVPILQHPDVRRSLMTMRAQTEAMRALALLTAAEMDVAGH 372

Query: 382 --EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +A +R        +  P+ K      A  + +  ++  GG GYIEE    +  R+   
Sbjct: 373 AADAAARQSAQRRVDLFTPVVKAVASDQAVEITSVGIQVHGGMGYIEEVEAPQLLRDVRV 432

Query: 440 NSILLGSGNAMVLD--VLNLLEKGTNLFEQLFSTLEQ------------DLGSSGKKVIT 485
            +I  G+      D  +  +L+ G    E +    ++             L     + + 
Sbjct: 433 AAIYEGTNGIQAQDFTLRKVLKDGGETLEAVLGEADETVEALRRDPDVAPLADGLAEGVA 492

Query: 486 ILRDSISLCKEDKG--------LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            LR+S +   +D           A     +  L      + RA +   A   +     D 
Sbjct: 493 TLRESTARLLQDGAEDPLVPLTAATPYLMQAGLVLGGWLMGRAALA--AQAGIRAGSGDA 550

Query: 538 CHSTHCMLHGRFNAAHIIDSL 558
                 +   RF   HI+  L
Sbjct: 551 DFYAGKLHTARFYMRHILPRL 571


>gi|296139562|ref|YP_003646805.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027696|gb|ADG78466.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 385

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 138/383 (36%), Gaps = 41/383 (10%)

Query: 96  KVEFHPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           + E  P +       I            G+        +      ++ K +A     + +
Sbjct: 22  EAEVVPHYDEWYANGIVPKDFYLKLGELGVFGIEVPEEYGG-AGIESFKYQAVISEELGR 80

Query: 146 LEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  S    +  +  L    T    + W P + S E                 + +T
Sbjct: 81  AGVSFGGSSVHIALCLPYLTSLGTDEQKQRWLPGMASGE-------------TMFAIAMT 127

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLV 258
           E   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+          F +
Sbjct: 128 EPGTGSDLAGMKTTAKLSADGSHYVLNGAKTFITGGVNADRVIVCARTAPATEDDRRFGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              + D +  G    R  +KIG R++ T EL F++       LLG+ N   G +      
Sbjct: 188 SLFVVDTTLAGYEVGRKLDKIGLRTSDTAELSFTDVAVPAADLLGEENKGFGYLGQNLPQ 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + S    ++  A  Y + R + G  +      K  +A     + A  +   R
Sbjct: 248 ERLSIAVGAYSQASAAVRFAQAYTQDRTIFGKSVASFQNTKFELAACKAKVDAMESSVDR 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D  +  + +AA         K +C + A  VI   ++  GG GYI E  IAR Y 
Sbjct: 308 GLELHDAGELTAADAA-------SLKLFCTEAASDVIDRCLQLHGGYGYINEYPIARLYA 360

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++  N I  G+   M   +   +
Sbjct: 361 DNRVNRIYGGTSEVMRSIIAKDM 383


>gi|221065119|ref|ZP_03541224.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710142|gb|EED65510.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 587

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 99/528 (18%), Positives = 179/528 (33%), Gaps = 79/528 (14%)

Query: 34  MNAYSSDSLLVALIANFP---SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +   +D  L  L A+      ++ + LE  G++V    A           P   +    
Sbjct: 15  FDVLRADEQLQRLPAHAATDRGLMQQVLEESGKWVGEVVA-----------PLSRSGDET 63

Query: 91  GERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           G R++  +V   P + A  +     G                          +L A    
Sbjct: 64  GARFEGGQVATPPGFAAAYQDFWQAGWPALACAEEDGGQGLPWV-LEGVLYEWLSAANHG 122

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +    +  A   +    +  +   + P + S E+                + LTE   
Sbjct: 123 WTMAPGLLHGAYECLKHHGSEALKSAYLPNVASGEW-------------LATMCLTEAHA 169

Query: 208 GTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------R 252
           G+D+  + +Q            + +SG K F+S    D       ++LA++ G       
Sbjct: 170 GSDLGQVRTQAVPAGASELGERFEISGSKIFISGGEHDLSANIVHLVLARLPGAPAGPRG 229

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +  FLVP+LL  G  NG+  +R++ K+G   + T  + F    G+L+G        +  M
Sbjct: 230 LSLFLVPKLLPGGERNGVVCERIEEKMGLHGSPTCVMRFEAAQGWLIGQPGAGLNAMFVM 289

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------------LIDQPVMKR 357
                L  A+  +  +  +  +A  YA  R                     +I+ P ++R
Sbjct: 290 MNAARLHVALQGMGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIEHPAIRR 349

Query: 358 AIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            +      +     L++       +A   + A+ R +   +  ++ PI K    + A   
Sbjct: 350 TLDLQRAWVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPILKSAWTQQAFEG 409

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLF 469
            +  ++  GG GYI E  I +  R+S    I  G+       L V  +L  G     Q  
Sbjct: 410 ASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQAMGQWL 469

Query: 470 STLEQDLGSSGKKVITILRDSISL----------CKEDKGLARFLTEK 507
             L + L +       +LR    L          CKED  LA  + + 
Sbjct: 470 LGLRKSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLAWRVADD 517


>gi|192290814|ref|YP_001991419.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284563|gb|ACF00944.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 384

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 136/387 (35%), Gaps = 31/387 (8%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+++ P+  L  +      P  + W+     PA H L ++    G         +    
Sbjct: 4   TADHDEPRRILQRFIQSDINPHVDEWENAGIFPA-HELFKKLGDLGFLGLNKPVEYGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
              ++        LM   E G +    V  A  V   M TP + +       S E     
Sbjct: 63  LDYSYA-------LMMAEELGAINCGGVPMAIGVQTDMATPALARFG-----SDELRKEF 110

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
            AP         +G++E   G+D+A I +  +   D      G  W  +   +D   +L 
Sbjct: 111 LAPSIAGDYVACIGVSEPGAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLC 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
                        +       G+   R  +K+G RS+ T ++ F          +     
Sbjct: 171 NTGEGPVHRNKSLICVPMKTKGVTIARKLDKLGMRSSDTAQIYFDGVRVPKRNRIGEEGK 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M       L  A   +     ++   I Y R R   G  L+D  V+   +A++  
Sbjct: 231 GFTYQMVQFQEERLWGAAACLKAHEKTIQNTIEYTRGRKAFGKPLLDNQVIHFRLAELQT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++    +L +R A +    +  ++       +A + K    ++   +    ++  GG G+
Sbjct: 291 EVELLRSLVYRAAEALVAGEDVTQ-------LATMAKLKAGRLGREIPDACLQFWGGMGF 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           + E  ++R YR+S   +I  G+   M+
Sbjct: 344 MNETLVSRSYRDSRLTAIGGGADEVML 370


>gi|226362138|ref|YP_002779916.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240623|dbj|BAH50971.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 396

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 136/380 (35%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E   ++  A++ +    GL        F  +                  +    +++
Sbjct: 34  QELEHSDSYPTAIVEQMKEMGLFGLTIPEEFGGIGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+A   TP     + P++ + E             +     ++E   G+D+AA
Sbjct: 94  THFIVAHMIAHHGTPEQKAHYLPRMATGE-------------LRGAFSMSEPGLGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE-------GRVGCFLVPRLLEDG 265
           I ++  + +DG Y + G K +L++  S   + +L + E         +  FL+ +    G
Sbjct: 141 IRTKATRAADGDYVIDGQKMWLTNGGSSTLVAVLVRTEEGAPKAHDNLTAFLIEKPAGFG 200

Query: 266 SP-NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL       K+G +   T E+ F          L G        + D   +  ++ 
Sbjct: 201 EVLPGLTIPGKIEKMGYKGIDTTEMVFDGYRAAADTILGGAPGRGFRQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +    + +    + YA+ R   G  + +   +   IA++A  + AA  +    A   
Sbjct: 261 AARACGIAQRAFELGVKYAKARETFGSPIAEHQAIAFRIAEMATKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +     A  A+ +A        +    V  ++    GG GY +E  I R  RE+P  
Sbjct: 321 DSGERNDVAAGMAKYLA-------SEFCSEVTQDSFRIHGGYGYSKEYEIERLMREAPFL 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+ +     +   + +
Sbjct: 374 LIGEGTSDIQKQIISRGVLR 393


>gi|297564353|ref|YP_003683326.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848802|gb|ADH70820.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 605

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 102/539 (18%), Positives = 198/539 (36%), Gaps = 70/539 (12%)

Query: 32  IGMNAY----SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           I  N +      D L  A          + +      + +    E    A+ N P    +
Sbjct: 11  IEFNLFEVFKRQDVLGQAPFEELDEETARTILDEVNRLATGVIAESFEDADRNPPV---F 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P   + + V    +     +  +  G +     +    +   ++    AA L L     
Sbjct: 68  DP---KTNTVALPESLKKSYKAYMDAGWYNLDLPQELGGLGAPRSLVWSAAELIL-GSNP 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A H+ S     AS++                              +      + LTE   
Sbjct: 124 AVHMYSAGPGFASILHSEGNEEQK--------------RFAELAIERGWGATMVLTEPDA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCF 256
           G+D+ A  ++     DG + + G K F++S   D       ++LA+ EG       +  F
Sbjct: 170 GSDVGAGRTKAVDQGDGTWHIEGVKRFITSAEQDMTENIFHLVLARPEGAGPGTKGLSLF 229

Query: 257 LVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308
           LVP+ L  EDGSP   NG     +++K+G +++ T EL F +     G+L+GD +     
Sbjct: 230 LVPKYLINEDGSPGERNGAYVTNVEHKMGLKASTTCELTFGDKHPAIGYLVGDKHDGIRQ 289

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GG-----ILIDQPVMKRA 358
           +  +     +     +++ +      A+ YA+ R        G       +   P ++R+
Sbjct: 290 MFLVIEYARMMVGTKAIATLSTGYLNALEYAKERVQGNDLAAGKDSPKVTITHHPDVRRS 349

Query: 359 IADIALDIAAATALSFRLANSFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +      + A  AL    A   D         +  +E  A   ++ PI K    + + A+
Sbjct: 350 LMTQKSYVEAMRALVLYTATQQDAIQIAHRTGQDATELEAMNDLLLPIVKGVGSERSYAL 409

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLF 469
           +AE+++ +GGSG+++E  I ++ R++  +++  G+      D     +++ G     +L 
Sbjct: 410 LAESLQTLGGSGFLQEYPIEQYIRDAKIDTLYEGTTAIQAQDFFFRKIVKNGGQALGKLA 469

Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA-----LASSAAALYRAGMN 523
             ++    S        L+   +L  E       + E +       A  A  LY+ G+N
Sbjct: 470 GEIKAFAQSDAGN--GQLKQERALLLEAAENVEKIVELMVGHAMGSAEDARELYKVGLN 526


>gi|288960856|ref|YP_003451196.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913164|dbj|BAI74652.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 387

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 126/354 (35%), Gaps = 25/354 (7%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTT 167
           ++   GL       ++           +          E    L+  S   A  +    T
Sbjct: 47  KAGRQGLLLMWAPETYGGAGVDDFRYEQIVYEENFRHGEPGFFLVLHSRIVAPYIGRFGT 106

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + P   S E               + + +TE   G+D+A++ ++ +   D  + 
Sbjct: 107 EEQKRRFLPGAVSGE-------------TILAVAMTEPGAGSDLASMRTRAEDRGDH-WL 152

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           L+G K ++S+ +    +++A          +   + +    G       +K+G  +  T 
Sbjct: 153 LNGSKTYISNGLLADAVVVAARTVPDSRHGIGLFIVERGMEGFSRGGRFHKMGLHAQDTA 212

Query: 288 ELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F N        L         +        L +A+ S++  +V+    + Y + RH 
Sbjct: 213 ELFFDNVRVPKANVLGDPTRGFHLLAHGLAEERLIAAVGSIAHAQVAFDLTLDYVKERHA 272

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      +  +A++   + AA     +     +  +   E AA A+++        
Sbjct: 273 FGRPIGTFQNSRFKLAEMRAQLDAAQTFVDQCVLEHNAGRLTGETAAAAKLIT------- 325

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   V  + ++  GG+GY+EE  I+R Y ++    I  GS   M   +   L
Sbjct: 326 SELEGRVADDCVQLHGGAGYMEEYRISRIYTDARITRIFAGSSEIMKEIIGRSL 379


>gi|302545219|ref|ZP_07297561.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462837|gb|EFL25930.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 385

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 129/364 (35%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               ++    G+        +                    A +  G     +      +
Sbjct: 40  RDFYKKLGELGIFGIEVPEEYGGAGETSFKFNAVITEELARAGVSFGGSSVHTALCLPYI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + W P   S               +   + +TE   G+D+A + +  +   
Sbjct: 100 LKYGNEEQKRRWLPSFVSG-------------DLMTAIAMTEPGTGSDLAGMKTTAKLSE 146

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           DG  Y L+G K F++  + +D  ++ A+            +  L+ D +  G    R   
Sbjct: 147 DGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDRRGGISILVVDTTSEGYAVGRKLE 206

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T EL F++       LLG+   + G +        L  A+ + +    ++  
Sbjct: 207 KLGLKTSDTAELSFTDVKVPVEDLLGEEGKAFGYLAHNLPQERLGIAVSAYAQSAAAVEF 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y + R V G  +      K  +AD   ++ A  A+  R   + D  +  + +AA A 
Sbjct: 267 AKAYVQDREVFGKSVASFQNTKFTLADCKAEVDAMQAVVDRALEAHDAGELTAADAASA- 325

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  + A  VI + ++  GG GY+ E  IAR Y ++    I  G+   M   V
Sbjct: 326 ------KLFTTEHAAVVIDKCLQLHGGYGYMMEYPIARLYADTRVTRIYGGTSEVMRSIV 379

Query: 455 LNLL 458
              +
Sbjct: 380 AKSM 383


>gi|90424697|ref|YP_533067.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90106711|gb|ABD88748.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 386

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/393 (17%), Positives = 146/393 (37%), Gaps = 29/393 (7%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+++ P+  L  +      P  + W+K +  PA H L ++    G         +    
Sbjct: 4   TADHDEPRRVLQKFIASEINPHVDEWEKAQIFPA-HELFKKLGDLGFLGLNKPIDYGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++ +      +MA+            +  +   M TP + +       S E      
Sbjct: 63  LDYSYAL------MMAEELGTIRCGGVPMAIGVQTDMATPALARFG-----SDELRREFL 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP     +   +G++E   G+D+AAI +      D      G  W  +   +D   +LA 
Sbjct: 112 APAIAGDMVACIGVSEPGAGSDVAAIKTSAVSDGDDYLINGGKMWITNGTQADWICLLAN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
                       ++      G+   R  +K+G  S+ T ++ F          +     G
Sbjct: 172 TGDGAKHRNKSLIVVPMKSKGVTVARKLDKLGMHSSDTAQIFFDEVRVPKRNRIGEEGMG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M       L  A   +    +++A+ I Y R R   G  ++D   +   +A++  +
Sbjct: 232 FTYQMLQFQEERLWGAAACLKAHDLTIADTIDYTRNRKAFGHSILDNQTVHFRLAELQTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + A  AL +R A +    +  ++       +A + K    ++   +    ++  GG G++
Sbjct: 292 VEALRALVYRAAEAMLAGEDVTK-------LATMAKLKAGRLGREIPDACLQFWGGMGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E +++R YR++   SI  G+   M+  +  ++
Sbjct: 345 NETAVSRAYRDARLTSIGGGADEVMLGVLCKMM 377


>gi|94732791|emb|CAK04853.1| novel protein containing an Acyl-CoA dehydrogenase, N-terminal and
           C-terminal domain [Danio rerio]
          Length = 445

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 139/379 (36%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ +  A      
Sbjct: 82  QEINPHVDKWEEEGLFPA-HKIFKILGSAGFLGVNKPVEYGGLGLDFSYSLAVAE----- 135

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G++    +  A  V + M TP + +       S E       P     V + LG++
Sbjct: 136 --ELGNINCGGIPMAIGVQSDMATPALARFG-----SAELKKEFLQPTIMGDVVVCLGVS 188

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I ++  +  D      G  W  +   +D   +LA             +  
Sbjct: 189 ETGAGSDVASIKTKAVRKGDEYVINGGKMWTTNGTQADWMCLLANTSDGPPHKNKSLICL 248

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G+   R  NKIG  S+ T E+ F +        +     G    M       L  
Sbjct: 249 PMKLPGVHIARKINKIGMHSSDTAEVFFDDVRVPCSNVIGQEGMGFTYQMLQFQEERLWG 308

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               ++ M   + E I Y R+R +    ++   V+   +A++ ++I    +L  R    +
Sbjct: 309 VANILTVMEKVVQETIQYTRQRKIFNQPILHNQVVHFRLAELQMEIELLRSLLHRATALY 368

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +    ++       +A + K    ++A  +    ++  GG GY  +  ++R YR+S   
Sbjct: 369 IKGNDVTK-------LASMAKLKAGRLARELADSCLQYWGGMGYTSDVLVSRFYRDSRLM 421

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+   M+  +   ++
Sbjct: 422 SIGAGADEVMLSIICKYMD 440


>gi|323488555|ref|ZP_08093799.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
 gi|323397772|gb|EGA90574.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2]
          Length = 402

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 130/382 (34%), Gaps = 44/382 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P +  +   G+        PA   +  +    GL       ++        +   A    
Sbjct: 26  PYIEEWDRAGKS------DPA---IYGKLADLGLMGVCIPEAYGGSGMD--YNSLAIVCE 74

Query: 142 LMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            + + +     + SV +      +    T    + +               P  K     
Sbjct: 75  ELERGDTAFRTAVSVHTGLNSLTILQWGTEEQKQQYLI-------------PQAKGEKVG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFL 257
             GLTE   G+D+AA+ S   K  D         W     ++D FI+ A    +      
Sbjct: 122 AFGLTEPSAGSDVAAMKSTAVKKDDHYLLNGQKTWISLCDVADHFIVFAYTGNQAEKHNA 181

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           +   + + +  G   + +K K G R+  T EL F +    +    N+     E  KI + 
Sbjct: 182 ISAFIVERTWPGFSSKAIKGKHGIRAGNTGELFFEDVKIPI---ENLLGKEGEGFKIAMS 238

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                    A  +V  +   L  ++ Y R+R   G  +    ++++ IA++      +  
Sbjct: 239 ALDNGRFTVAAGAVGQIMACLEASVSYCRQRQTFGKEIGRHQLVQQMIANMEAGFQMSRL 298

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L +R     ++ K  + E + A+  A       C  A     +A +  G  GY +E  ++
Sbjct: 299 LVYRAGELKNQGKRNTRETSLAKWQA-------CDFAYKAADDAFQIHGAYGYSDEYPVS 351

Query: 432 RHYRESPANSILLGSGNAMVLD 453
           R+ R S A  I  G+     + 
Sbjct: 352 RYLRNSKAPVIYEGTREIHTIM 373


>gi|238482813|ref|XP_002372645.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220700695|gb|EED57033.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 637

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 120/542 (22%), Positives = 215/542 (39%), Gaps = 70/542 (12%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD+ L   ++ +           +L  LGE  +S   +E +  A  + P +  +  
Sbjct: 23  NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L +     G+    ++ ++    R     ++ A  YL +   
Sbjct: 83  WGQRYDYDRLITSEGWKQLGKWGARHGVVSLGYEPTYGAERR----LVQYAVNYLYSPSS 138

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +    S++     AL+         A   F   Y        ++     G  +TE+ G
Sbjct: 139 GLYSCPVSMSDG--AALVLNQERKNVAADHPFQTAY--QKLISKKEDYWTSGQWMTERAG 194

Query: 208 GTDIAAITSQGQKI------------SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           G+D+    +                  +G Y ++G K+F S+  ++  +MLA+   G++ 
Sbjct: 195 GSDVQNTETWATYSPLSHRSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKLS 254

Query: 255 CFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            FL P     + EDG P    NG+   RLKNK+G +   T ELE  +    L+G ++   
Sbjct: 255 TFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHGV 314

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +  +    + I S++  R +++    +A+ R   G  L   P+    +AD+ +  
Sbjct: 315 MAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKVRTTVGEPLWLIPMHLSLLADLEVKH 374

Query: 367 AAATALSFR----------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             A  L+F                  A+   + K   E     R +  I K    K A A
Sbjct: 375 RGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGK---EAQVVFRALTAIAKAVISKNAIA 431

Query: 411 VIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL- 464
            I E  E +GG GY++     E +IAR  R +  NSI  G+ N +  +++  L K  NL 
Sbjct: 432 GIQECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNLT 491

Query: 465 -----FEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDK---GLARFLTEKIALASSAA 515
                FE+  + +   +  S+ K++ +     I    E +     AR +   +A     A
Sbjct: 492 IFSAWFERTLALITTPEFASALKQIWSDFLSRIKATSEPRFILADARRVMFTLAWILCGA 551

Query: 516 AL 517
            L
Sbjct: 552 LL 553


>gi|149184969|ref|ZP_01863286.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831080|gb|EDL49514.1| acyl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 386

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 32/361 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHK 172
           GL        +           +  +    A      + S +V   +  +    T     
Sbjct: 46  GLFGLTVPEDYGGAGLNITQYAKVVQTMAYAAPAYRSIFSINVGMFNSAIKNGGTEAQKA 105

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSG 230
           +W P+I   E                  GLTE   G+D AA+ +  +   DG        
Sbjct: 106 EWWPRIAGGE--------------IACFGLTEPGSGSDSAAMQTMARPDPDGNGWILNGT 151

Query: 231 HKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            ++  ++P +D  +++A+ E         V   +      G+       K+G   +   +
Sbjct: 152 KRYITNAPHADVALIMARTEKDALPKNAHVSAFIVPMDTPGVSTGSPDKKMGQSGSHISD 211

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRH 343
           +   +        L   TG       ++ LD+  +SV        R +L  A  YA  R 
Sbjct: 212 VMLDDVHVPSEALLGGETGQGFRF-AMMSLDNGRISVGAASAGYARRALDSATKYATERQ 270

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +  ++++ +A+   +I AA A+   +    D  +   + AA         K +
Sbjct: 271 AFGEPIANFQLIQQMLAESWTEIYAAEAMMADVTARVDRGEDTVKHAA-------AFKVF 323

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +M   V+   ++  GG+GY+ E    R +R++    I  G+   + L +   + +   
Sbjct: 324 ASEMCGRVVDRVVQIYGGAGYLAEYDAERFFRDARIYRIYEGTTQILQLQIAKRMLREHA 383

Query: 464 L 464
            
Sbjct: 384 A 384


>gi|319443183|ref|ZP_07992339.1| acyl CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 587

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 95/524 (18%), Positives = 180/524 (34%), Gaps = 64/524 (12%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQE-----LARMANYNTPQLHAYGPGGERWDKVEFHP 101
           +  +     +  +  G   +S    E       R  + N P L       +  D+V    
Sbjct: 30  LERYAEHSRETFD--GLLDVSRQLSEDLFAPHNRTGDLNEPTLV--DGKVQTIDEV---- 81

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
                L+     G   +  D  F            A   +  A +        +  +A++
Sbjct: 82  --KPALKAFAGAGFLTATMDEEFGGFSLPATIYRAAFLWFQAANVGTVSYALLTTGAANL 139

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T  + K + P +    +  T             + L+E   G+ +  +T+   K 
Sbjct: 140 IRTHATEELQKKFLPPMLDGRWFGT-------------MNLSEPGTGSALGDLTTAATKQ 186

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----RVGCFLVPRLLED----GSPN 268
            DG Y L G K ++S    +       ++LA+  G     +  F+VP+ L +       N
Sbjct: 187 EDGTYRLRGDKMWISGGDQEVSENIVHLVLARTGGPGVKGLSLFIVPKWLGEPGNLTERN 246

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+    + +K+G R      L + +  G+L+G+       +  M     +     + +  
Sbjct: 247 GVTLVGVNHKMGYRGTVNTALNYDDATGYLIGEEGRGLFYMFHMMNEARIGVGAGATALG 306

Query: 329 RVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 +  YAR R                 +I    ++R + +       A A+    A
Sbjct: 307 VTGFLHSRDYARGRIQGRPLDAKDPKTPAVPIIRHADVRRMLLEQKAYAEGAVAVILYAA 366

Query: 378 NSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
              DE       + R+       ++ P+ K W  +      + A++ +GGSGY  +  + 
Sbjct: 367 KVLDESVAASSPEERTAAHQLLEVLTPVAKSWPSQWCLEGNSLAIQVLGGSGYTRDYPVE 426

Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD---LGSSGKKVITI 486
           + YR++  N I  G+     LD+L   +L  G + F  L   +      L  S  ++   
Sbjct: 427 QFYRDNRLNPIHEGTHGIQGLDLLGRKVLLDGGSGFRDLLGRITATCDGLADSHPELADP 486

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           LR   +   E   +A +  +    A S A +Y     DI   +L
Sbjct: 487 LRSRTTRLAEVTAIA-WEDKDAGTALSNATMYLEAAGDIVIAWL 529


>gi|254284159|ref|ZP_04959127.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680362|gb|EED36711.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 392

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 127/378 (33%), Gaps = 29/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D  +  PA   L+ +    GL  +     +  +                  +  
Sbjct: 34  PVAMKFDHDDVWPA--ELVEQMTEMGLFGATISPEYGGLGLPARTYAEIVMRISSYWMAI 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +  +  A+ +    T      W P+  S E                GL LTE   G
Sbjct: 92  TGIFNSHLMMAAAMERFGTEAQKSHWLPRFASGEIRG-------------GLALTEPNAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           TD+ AI +   +  D         W  +     A  +L + +         +   +    
Sbjct: 139 TDLQAIRTTAVRDGDDYVINGTKTWITNGIQGSAVALLVKTDPNADPRYKGMSLFIAPKG 198

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G    +   K+G  +  + EL F +        + G+             L  ++ A 
Sbjct: 199 -EGFTVGKKLKKLGYNAIDSAELVFEDYRLSADHLIGGEEGKGFFQATGGLELGRINVAA 257

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V     SL  A  YA+ RH  G  + +   ++  + ++A    AA  ++   A+++D 
Sbjct: 258 RGVGLCDGSLRLATEYAQTRHTMGKPICEHQAIQLKLGEMATRARAARLMTLDAADAYDS 317

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    EA  A       KY+  + A     E+M   GG GY +E  I R+YR+S    I
Sbjct: 318 GQRCDMEAGMA-------KYFASEAAVRNSEESMRIHGGYGYSKEYEIERYYRDSLLMCI 370

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +     K
Sbjct: 371 GEGTNEMQRMIIAKQWVK 388


>gi|254253130|ref|ZP_04946448.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124895739|gb|EAY69619.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 395

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 144/408 (35%), Gaps = 44/408 (10%)

Query: 69  TAQELARMANYN--TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A       +L        R ++ +       + R     GL        +  
Sbjct: 20  EDERMVRDAARAYAQDKLAPRVTDAFRHERTDI-----EIFREMGEVGLLGPTIPDEYGG 74

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                      AR           +MS  S      +    +    + + PK+ S E+  
Sbjct: 75  PGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGSDAQKQKYLPKLASGEW-- 132

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++
Sbjct: 133 -----------IGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIADVFVV 181

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A++    G   +   + +    GL    +  K+G R++ T E+   + F     L+ ++
Sbjct: 182 WAKLNDD-GNDTIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDDVFVPEENLMPNV 240

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKR 357
           N   GP         L+SA   ++   +  AE+  +  R     R   G  L    ++++
Sbjct: 241 NGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQK 294

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  +I        RL    DE  +       A  +  I K   C  A  +   A +
Sbjct: 295 KLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEVTSIMKRNSCGKALDIARLARD 347

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 348 MLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|158315835|ref|YP_001508343.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111240|gb|ABW13437.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 383

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 136/401 (33%), Gaps = 33/401 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   + L +       ++ A    G   D+ +  P  + ++ +    GL    +  S+ 
Sbjct: 6   LSEEHETLRKTVEEFAREVVAPAAAGH--DEAKTFP--YEIIAQMAEMGLFGLPFPESYG 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                      A      A       +   V   A  +    T    ++W P + S    
Sbjct: 62  GQGADYFALCLAIEELARADSSVAITLEAGVGLGAMPIYRFGTEAQREEWLPVLASG--- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D     +  Q + D  + ++G K F+++  +D   
Sbjct: 119 ----------RALGAFGLTEPGAGSDAGGTRTTAQLVGDE-WVINGSKAFITNSGTDITR 167

Query: 245 MLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           ++       E   G   +  ++      G       +K+G  ++ T  L F +       
Sbjct: 168 VVTVTAVTGEPVNGRPQISSIIVPVPTPGFSAGAPYSKVGWHASDTRPLSFQDVRVPAEN 227

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    + IL    +  + +SV   +  + E++ YA+ R   G  +     +  
Sbjct: 228 LLGERGRGYANFLSILDEGRIAISALSVGLAQACVDESVKYAKEREAFGAPIARNQAIAF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++      A    +  A          +EAA A       K +  + A     EA +
Sbjct: 288 KLAEMETRTYVARTAYYDAAWRMLAGLPFKKEAAMA-------KLFSSEAAVTNAREATQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG G++ E  +ARH+R+S    I  G+     + +   L
Sbjct: 341 IHGGYGFMNEYPVARHWRDSKILEIGEGTSEVQKMLIARHL 381


>gi|305667360|ref|YP_003863647.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88709408|gb|EAR01641.1| acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 603

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/441 (17%), Positives = 159/441 (36%), Gaps = 41/441 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
             +R++   GL       ++  +       +        A               +M + 
Sbjct: 68  ECMRKAGELGLLSVAVPEAYGGMGMGFVSTMLVCDYISGATGSFSTAFGAHTGIGTMPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P++ S E+                  LTE   G+D  +  ++     D
Sbjct: 128 LYGTEEQKQKYVPRLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 174

Query: 224 GIY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G +        W  ++   + FI+ A++E      +   ++E+   NG+     + K+G 
Sbjct: 175 GKHYSITGQKMWISNAGFCNMFIVFARIEDDK--NITGFIVENDPENGITMGDEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ FSNT       L     G    M    +  +  A   +   R  + EA++Y
Sbjct: 233 HSSSTRQVFFSNTKVPAENMLSERGNGFKIAMNALNIGRIKLAAACLEAQRRIIGEAVNY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------AKSRSEEAA 391
           A  R      +I+   +K  IAD+A D  A  + S+R A + ++       A +  +EA 
Sbjct: 293 ANERIQFKTPIINFGAIKGKIADMATDTYAGESASYRAAKNIEDRIALRVAAGNSHQEAE 352

Query: 392 Y-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   I   I K    +   +   E ++  GG G+  +  + + +R++    I  G+
Sbjct: 353 LKGIEEYAIECSILKVAVSEDVQSTTDEGLQIFGGMGFSADAPMEKAWRDARIARIYEGT 412

Query: 447 GNAMVLDVLNLL-EKGTNLFEQLFS---TLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
                +  + +L +K       L      + ++L            +     +E   +AR
Sbjct: 413 NEINRMLSVGMLVKKAMKGHVDLLGPATKVGEELMGIPSFDAPDFSEL--FAEEKDLVAR 470

Query: 503 FLTEKIALASSAAALYRAGMN 523
              +K+ L  + +A+ + G  
Sbjct: 471 L--KKVFLMVAGSAVQKFGPA 489


>gi|158315839|ref|YP_001508347.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111244|gb|ABW13441.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 384

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 129/376 (34%), Gaps = 28/376 (7%)

Query: 96  KVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E   A+   L+ +    G+        +  V                  +     M  
Sbjct: 29  ELEHANAYPEALIGQMKRLGVFGLAIPEPYGQVDVSTVCYALVTEELARGWMSLAGAMGG 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A ++    T    + + P++ + E   T             + LTE  GG+D+ A+
Sbjct: 89  HTVVAKLLLAFGTEEQKRRYLPRMATGELRAT-------------MALTEPGGGSDLQAM 135

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCY 272
            +  +             W  ++  S    +L + +         +  LL +  P G   
Sbjct: 136 RTTARPDGADYLVNGTKTWISNARRSGLVALLCKTDPAAEPAHRGISILLVEKVP-GFVI 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            R   K+G +   + EL F++        L G      G +     +  +  A  +    
Sbjct: 195 SRDLPKLGYKGVESCELSFTDCRVPRDALLGGVEGRGFGQMMRGLEIGRIQVAARATGVG 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +  +A+ YA+ R   G  +     +   +A++A  + AA  L    A  +D  +    
Sbjct: 255 RAAFDDALRYAQERESFGQPIWRHQSVGNHLAEMATKLTAARQLLLHAARRYDTGERADL 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K++C ++A  V   A+   GG GY  E  + R++R++P   +  G+  
Sbjct: 315 EAGMA-------KFFCSEVAMEVALAAIRVHGGYGYSTEFDVERYFRDAPLMIVGEGTNE 367

Query: 449 AMVLDVLNLLEKGTNL 464
                +   L     L
Sbjct: 368 IQRNVIAAQLVARGGL 383


>gi|83648760|ref|YP_437195.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636803|gb|ABC32770.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 395

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 146/404 (36%), Gaps = 42/404 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-P 126
              ++ AR  NY   +L +      R  K  FH     ++      GL  S     +   
Sbjct: 25  RMIRDTAR--NYAQEKLMSRILEANR--KEIFH---REIMNELGELGLLGSTLPEEYGCA 77

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++ + A  +  +       +   S      +    +    K + PK+ S E+   
Sbjct: 78  GANYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRKKYLPKLASGEW--- 134

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D  ++ ++ ++++DG        W  +SP++D  ++ 
Sbjct: 135 ----------VGCFGLTEPDSGSDPGSMRTRAERVADGYLLKGTKMWITNSPIADVMVVW 184

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+++G +  F++     +    GL   +++ K   R++ T E+   + F      L  ++
Sbjct: 185 AKLDGEIRGFIL-----EKGMKGLTAPKIEGKFSLRASITGEIVMDDVFVPEANMLPNAS 239

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361
           G          L+ A   ++   +  AE        Y   R   G  L    +++  +A+
Sbjct: 240 GLKGPFG---CLNKARYGIAWGALGAAEFCWTQARQYCLDRKQFGRPLAANQLVQLKLAN 296

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I+       +     DE +        A  +  + K   C  A  +   A +  GG
Sbjct: 297 MQTEISIGLQGCLQAGRLMDEGRC-------APELISLIKRNSCGKALDIARIARDMHGG 349

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 350 NGIADEFHVIRHVCNLEAVNTYEGTHDIHAL-ILGRAQTGIQAF 392


>gi|91780643|ref|YP_555850.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693303|gb|ABE36500.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 374

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 127/370 (34%), Gaps = 27/370 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             W+     P    L R++   GL CS     +        H              A   
Sbjct: 29  HEWEHAGIVP--KELWRKAGEIGLLCSTVPEEYGGSGGDFGHSAVMIEELARVNATAVGF 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S   A  +    T    + W P++ + E             +   + ++E   G+D+
Sbjct: 87  TTHSEIVAPYIVAYGTEEQKRRWLPRMAAGE-------------LVGVIAMSEPGIGSDL 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ +  Q+  +  Y ++G K F+++  +   ++ A  +       +  +  +    G  
Sbjct: 134 RSMRTTAQREGND-YIVNGQKTFITNGGNAGLVVTA-TKLDPQSRDLTLICVEEDMPGFS 191

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +L  KIG +   T EL F N     GF LG+ N     +            I + + +
Sbjct: 192 RGKLLEKIGLKGQDTAELFFDNVRVPAGFRLGEENNGFRYLTHQLAWERTIIGIRAAASI 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L E + Y R R V G  L D    +  +A++        A            +  +E
Sbjct: 252 DSLLDETVGYTRDRQVFGKRLFDFQNTRFKLAEVKAQATMLRAFVDDCLGKAMSGELTAE 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A         K    ++   ++ E ++  GG G++ E  I+R + ++    I  G+  
Sbjct: 312 VGAM-------CKLVGSELQGKLLDELLQLHGGYGFMSEYRISRAWVDARVARIYGGTSE 364

Query: 449 AMVLDVLNLL 458
            M   +   L
Sbjct: 365 IMKEIIGRSL 374


>gi|73537660|ref|YP_298027.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72120997|gb|AAZ63183.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 400

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 132/367 (35%), Gaps = 35/367 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      G    +    +  +          A       +  G L++    +  + A
Sbjct: 51  RELIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGWMSVGSLIARG--NGLIGA 108

Query: 164 LMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           L   +P    ++ P++   E+                  L+E   G+D+A I+ +  +  
Sbjct: 109 LKGLSPERKAEYLPRMARGEF-------------LGAFSLSEPNAGSDVANISCRAVRDG 155

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS----PNGLCYQR 274
           D         W   +  +D  +++ + +     +     +   + +      P G+    
Sbjct: 156 DDWLITGSKYWCTFADEADFILVICRTDPVIDPKARHKGLSAFMVEKPRGELPEGVK-GS 214

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  KIG     T EL F         ++G+   +              +A  S+   + S
Sbjct: 215 VIPKIGYHGWTTWELAFDGCRVPHSKMVGEEGKAFYLTTAGLETARAHTAARSIGLAQGS 274

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L ++I YA+ R+  G  + +   ++  +AD+A  I A+ AL + +    DE         
Sbjct: 275 LEDSIQYAKDRNQFGNPIGNFQAIRFKLADMATQIEASRALLYTVCERIDEGV------- 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A   A + K +  +M   V +E ++  GG+GY    +  R++R++    I  G+    +
Sbjct: 328 RADTEASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQM 387

Query: 452 LDVLNLL 458
             + + +
Sbjct: 388 RIISDAM 394


>gi|301166975|emb|CBW26554.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ]
          Length = 585

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 158/433 (36%), Gaps = 57/433 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD-KVEFHPAWHALLRRSIHDGLH 116
           L+  GE+  +  AQ  A++              G   D +     A  AL + +I     
Sbjct: 51  LQNTGEWTGNAVAQRAAQLDKEGA---------GTVVDGRTIPGEALSALYKEAIELDAI 101

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS-----ASMVALMTTPRVH 171
              +      +            L L+AQL    L S +  +       M+         
Sbjct: 102 GLPFPAELGGLGAP-----STITLMLLAQLSRACLASSTQMAFFTSIGEMIHRFCDEETA 156

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           +   P I   E             ++  + LTE   G+D+  I +      DG Y L+G 
Sbjct: 157 QRLVPMIARGE-------------ISGSMCLTEPGCGSDLGMIKTSATPTEDGKYLLNGS 203

Query: 232 KWFLSSPMSDAFIMLAQVEGRV-GCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNA 285
           K F+++       +LA+++G   G   +        + +         + + K+G   + 
Sbjct: 204 KIFITNGGGGLGFVLARIKGDKEGLAGISMFLCEQNIPEKEGLNYSIAKNEEKMGMHGSF 263

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T E+ + N+   L+G+       +  +     +   + ++  +  S+  AI YA  R   
Sbjct: 264 TTEVVYENSVATLVGEAGKGFKYMLHLMNEARIAVGMQALGTIEGSIGYAISYASEREQF 323

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------------------RS 387
           G  L + P+MKR + D   +  A  AL     + +D  +                     
Sbjct: 324 GKPLTELPLMKRNLEDFTTERDALRALLVDTISHYDIFQRLDLKKQKSGDLSKEEEELLK 383

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E + + R   P+ KY+ C+ A  +   A++ +GG G++EE  + R++R+S    +  G+ 
Sbjct: 384 ESSLWTRKRTPLVKYYACEQATLLSQRAIQVLGGYGFMEEYPVERYHRDSFGPLLYEGTS 443

Query: 448 NAMVLDVLNLLEK 460
               L  L  + K
Sbjct: 444 QIQALMALKDIMK 456


>gi|41350166|gb|AAS00428.1| acyl-CoA dehydrogenase [Saccharopolyspora spinosa NRRL 18395]
          Length = 401

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 138/386 (35%), Gaps = 36/386 (9%)

Query: 95  DKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +++E H  +   ++      GL   +    +  +                  +    +++
Sbjct: 34  NELEHHDEYPAKIVDGLKELGLFGLMIPEEYGGLGESLLIYALCVEEIARGWMSVSGIIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A ++    T    + + P++ + E             V     ++E   G+D++A
Sbjct: 94  THFIVAYLLLQHGTEEQRRKYLPRMATGE-------------VRAAFSMSEPGCGSDVSA 140

Query: 214 ITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFI-MLAQVE-GRVGCF-LVPRLLEDGSPN 268
           I ++  K    DG Y ++G K +L++  S   + +L + + G    +  +   L D    
Sbjct: 141 IRTKAVKDDDGDGDYTINGQKMWLTNGGSANLVAVLVRTDEGSDSVYQNMTTFLVDKEAG 200

Query: 269 ------GLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYL 318
                 GL       K+G +   T EL F          L G        + D   +  +
Sbjct: 201 FGETAQGLTVPGKIEKMGYKGVDTTELVFDGHRISAGQILGGVPGRGFYQMMDGVEVGRV 260

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A         +    + YA++R   G  +     +   +A++A  + AA  +  R A 
Sbjct: 261 NVAARGCGVALRAFELGVVYAQQRETFGKAIAGHQAVLFRLAEMATKVEAAHQMMVRAAR 320

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +    E+  A+ +A        +    V+ ++    GG G+ +E  I R YRE+P
Sbjct: 321 KKDSGQRNDLESGMAKYLA-------SEYCAQVVEDSFRIHGGYGFSKEYEIERLYREAP 373

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+ +   + +   + +   L
Sbjct: 374 MLLIGEGTADIQRMIIGRRVLEDYKL 399


>gi|324504740|gb|ADY42043.1| Medium-chain specific acyl-CoA dehydrogenase 10 [Ascaris suum]
          Length = 420

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 142/408 (34%), Gaps = 48/408 (11%)

Query: 66  LSCTAQELARMANYNT-----PQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSI 119
           L+   +EL  +          P    +   GE  WD          +++++   GL    
Sbjct: 32  LTDEQRELRDLVRKFVRDEIIPVAGHFDRTGEFPWD----------IIKKAHATGLVNVD 81

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
               +  +       +             G  +  +  + + + +  +  + K +  ++ 
Sbjct: 82  IPVEYGGLGLDLISSVIIGEGLGYGCTGIGAAILANDLAETPIIIAGSDEIKKKYLTRMV 141

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                        +  +     +TE   G+D++A+ ++ +K  D         W  +   
Sbjct: 142 -------------EEPLMAAYCVTEPGAGSDVSAVRTRSEKKGDEYVINGTKMWITNGGH 188

Query: 240 SDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           ++ F +L + +              + DG+  GL   + +  +G R++ T  + F +   
Sbjct: 189 ANWFFVLTRSDPDPKVSAGKAFTAFVVDGNAPGLSRGKKEVNMGQRASDTRAITFEDVRV 248

Query: 297 FLLGDLNVSTGPVEDMKI-LIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                 NV   P E  K+ ++  D      A ++       + EA  YA  R   G  + 
Sbjct: 249 PAK---NVIGAPGEGFKVAMMTFDKTRPLVAALATGLSARCVDEASKYALERKTFGQPIA 305

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   +   +AD+ +++  +  +++R A    +  + +         + I K +    A A
Sbjct: 306 NHQGVSFMLADMVINMELSRLVTYRSAWEIAKGGTGA-------YFSSIAKCFAADTANA 358

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               A++  GG+G+  E  + +  R++    I  G+     + +   L
Sbjct: 359 AATNAVQIFGGNGFNSEYPVEKLMRDAKIFQIYEGTSQIQRVVISRHL 406


>gi|321452407|gb|EFX63798.1| hypothetical protein DAPPUDRAFT_267664 [Daphnia pulex]
          Length = 263

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 104/260 (40%), Gaps = 5/260 (1%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           ++E   G+D+ ++  + +             W  + P +D  ++ A+ E  +G   V   
Sbjct: 1   MSEPGAGSDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAF 60

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L +    G    +  +K+G R + T EL F +        L       + +   +  + A
Sbjct: 61  LIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAANVLGGVNQGAKVLMSGLDYERA 120

Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +++   +  M+  +   I Y   R   G  + +  +++  +AD+   + A  + ++ +A 
Sbjct: 121 VLTGGPLGIMQSVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAK 180

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D     ++     R        WC + A  +  E ++  GG+GYI E  + R +R++ 
Sbjct: 181 NLDM--LGTDHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAK 238

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 239 LYEIGAGTSEIRRMLIGREL 258


>gi|331694912|ref|YP_004331151.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326949601|gb|AEA23298.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 397

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 115/361 (31%), Gaps = 32/361 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL        +  +                  +    +++     A M+    T    
Sbjct: 52  EMGLFGLTIPEEYGGLGESLLTYALVVEQIARGWMSVSGVINTHFIVAYMLTQHGTDEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           +   P++ + E             V     ++E   G+D+AAI ++  +  D        
Sbjct: 112 QRLLPQMAAGE-------------VRGAFSMSEPDLGSDVAAIKTKAVRDGDDYVIDGAK 158

Query: 232 KWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRS 283
            W  +   S+   +L + +         +   L +          GL      +K+G + 
Sbjct: 159 MWLTNGGTSNLIALLVRTDEGKPKPHQNLTAFLVEKPTGYGEVAPGLTIPGKIDKMGYKG 218

Query: 284 NATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T E  F          L G+       + D   +  ++ A  +      +   A+ YA
Sbjct: 219 VDTTEAVFDGYRIPASAILGGETGKGFSQMMDGVEVGRVNVAARACGISIRAFELAVEYA 278

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           ++R   G  + +   +   +A++   + AA  +    A   D       EA  A+++A  
Sbjct: 279 QQRSTFGKPIAEHQAIAFKLAEMGTKVEAAHHMMVNAARLKDAGTRNDVEAGMAKLIA-- 336

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 +    V  EA    GG GY +E  I R  RE+P   I  G+       +   L 
Sbjct: 337 -----SEYCAEVTQEAFRIHGGYGYSKEYEIERLMREAPFLLIGEGTSEIQKTIISRGLL 391

Query: 460 K 460
           +
Sbjct: 392 R 392


>gi|330873878|gb|EGH08027.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 600

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 93/505 (18%), Positives = 179/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA    +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPA----VDAFIAAGFLNASRDFDVGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++    +    + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S          A ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIAHLVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPSGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   +   ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLIANTCERAQAHASLVELRQPLEQLVASLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|258512754|ref|YP_003186188.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479480|gb|ACV59799.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 585

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 92/456 (20%), Positives = 168/456 (36%), Gaps = 48/456 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            +  +FH     LL+R+   GL       ++  +   +  K     +  M         +
Sbjct: 53  IEAEDFHRV-VQLLKRAGDLGLLAHSVPEAYGGLGLDKISKGIVGEMVGMTGAYGVAHSN 111

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +   +    +  V     PK+ S EY                  LTE   G+D  A
Sbjct: 112 HTCIATLPITYFASEAVKHRVLPKMASGEY-------------LGAYCLTEPTAGSDALA 158

Query: 214 ITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +  +   DG  Y +SG K F+++   +D F++ A+++G          L + S  G+ 
Sbjct: 159 AKTVARLSEDGTHYLISGTKQFITNAGFADTFVVYAKIDGEH----FTAFLVERSFPGIS 214

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
               + K+G   ++T ++ F +    +   +G++         +  L   +    +V G 
Sbjct: 215 LGPEEQKMGIHGSSTRQVIFDDCPVPVENVIGEVGRGHAVALGVLNLGRFNLGAGNVGGA 274

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--- 385
           + +LA A  YA  R   G  + + P  +  +A +A  I AA +L +R A   + A +   
Sbjct: 275 KRALAVAARYAAERRQFGRAIAEFPATQAKLASVAARIYAAESLVYRTAAMLEGALAPLY 334

Query: 386 -----RSEEAAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                R +EA          + K    +       EA++  GG GYI E  + R  R++ 
Sbjct: 335 GELPTREKEARLREHAIECAVCKVHGSETLWKAADEAVQIHGGYGYIREYHVERMLRDAR 394

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
              I  G+     L +     +  +   ++ S L   + + GK+V              +
Sbjct: 395 IQRIFEGTNEINRLLIPTHFLRRVSRQPEMVSRLSAAVDALGKRV--------------E 440

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534
                +  + A      ALY AG   +AD F   R 
Sbjct: 441 VRGGPMAHERAAIEQMRALYLAGCALVADRF-AGRL 475


>gi|71652152|ref|XP_814739.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70879737|gb|EAN92888.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 624

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 145/397 (36%), Gaps = 51/397 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-- 154
           V+    +        + G         +       +  +      LMA       M P  
Sbjct: 97  VKTPKGFKEAYASYKNGGWVGMSLPEEYGGQGLPGS--VGFILRELMATANWSFAMYPGL 154

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+ +A+ +    +   ++ +  K+ S E+  T             + LTE + GTD+A +
Sbjct: 155 SMGAANTLLAWGSKEQNEVYLTKLVSGEWTGT-------------MCLTEPQCGTDLAQV 201

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------VEGRVGCFLVPRLLE 263
            ++ +  +DG Y L+G K F+S+   D       I+LA+          +  FLVPR + 
Sbjct: 202 KTKAEPCADGSYKLNGTKIFISAGDHDMTENIVHIVLARLPDSVPTTKGISLFLVPRHVV 261

Query: 264 DGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
                      +    L++K+G + +AT +L F N+ G+L+G  N     +        +
Sbjct: 262 KPDGSLETNKNVKCVGLESKMGIKGSATAQLSFENSVGYLIGAPNEGMKQMFTFMNTARV 321

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDI 366
            +++  V    ++   A+ YAR R                  L+  P +++ I       
Sbjct: 322 GTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPNDPLVWHPNVRQNILFAKAVA 381

Query: 367 AAATALSFRLANSFD---EAKSRSEEAAYAR---IMAPITKYWCCKMAPAVIAEAMECIG 420
               A    +    D   EAK  S   A         PI K    +      +  ++  G
Sbjct: 382 EGGRAFLTDMGRLLDIQGEAKDASLRDALEHEIGFYTPIAKGCLTEWGLEASSRCLQVWG 441

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G GYI+   + +  R++  +++  G+     LD +  
Sbjct: 442 GHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIGR 478


>gi|288555723|ref|YP_003427658.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus
           pseudofirmus OF4]
 gi|288546883|gb|ADC50766.1| acyl-CoA dehydrogenase domain protein [Bacillus pseudofirmus OF4]
          Length = 587

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/457 (18%), Positives = 165/457 (36%), Gaps = 41/457 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL+++   GL       ++  +   +  K         +        + +  +   +  
Sbjct: 65  QLLKKAGSLGLLAHSIPEAYGGLGLDKVSKGIVGEEIGGSSGYGVAHSNHTCIATLPITY 124

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISD 223
               R    + PK+ S +Y                  LTE   G+D  A  +        
Sbjct: 125 FGNERQKNKYLPKLASGDY-------------LGAYCLTEPSSGSDALAAKTTAVLSQEK 171

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K ++++ + SD FI+ A+V G          + +    GL     + K+G +
Sbjct: 172 THYILNGTKLYITNAVFSDTFIVYAKVNGDQ----FTAFILEKDFKGLTLGPEEQKMGIK 227

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T  +   +    +   L  V  G V       L   +     +   + +L  AI + 
Sbjct: 228 GSSTRSVILEDCEVPVENVLGEVGKGHVIAFNVLNLGRFNLGSACMGAAKGALKLAIEHT 287

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-------DEAKSRSEEAAY 392
             R      + +  + K  +A +A  I AA +L +R A+         D+  S  E    
Sbjct: 288 NERKQFKKRISEFGITKEKVALMAARIFAAESLQYRTADLLEGALGEIDDTHSVGEVGKR 347

Query: 393 ARIMA---PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               A    I K +  +    V+ E+++  GG+G+I+E  I + YR+S  N I  G+   
Sbjct: 348 MMEYALECAICKVYGSETLDYVVDESLQLHGGAGFIKEYPIEQMYRDSRINRIFEGTNEI 407

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
             L V  L  K     E     ++Q +  +  ++    ++S S    ++   R + + + 
Sbjct: 408 NRLLVPGLFLKKGAKGEL---PVQQAINQAIDRLKKGKQESYSGILSNE---RGVVDSLR 461

Query: 510 ---LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
              LA +  +  + G    ++  +  +  D     + 
Sbjct: 462 TVYLALAGLSYQQFGKELESEQEILIKLADIGIELYA 498


>gi|167031196|ref|YP_001666427.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166857684|gb|ABY96091.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 393

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 146/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EIGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F     +
Sbjct: 179 VFVVWAKDDEGD----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPDENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|330963775|gb|EGH64035.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 600

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 94/505 (18%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++    +    + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNYDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   +   ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLIANTCERAQAHASLVELRQPLEQLVARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|297181807|gb|ADI17987.1| acyl-CoA dehydrogenases [uncultured Chloroflexi bacterium
           HF0200_09I09]
          Length = 384

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 142/361 (39%), Gaps = 26/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
            L+      G                +   +        A +    L++ S   +  ++ 
Sbjct: 42  ELIGLMGEVGFFGVALPEKSGGAGLGELGMVVTLEELSRAHVSTALLLTASSGLAGRIIN 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  +    + +  ++ S E             +     LTE   G+D++A+++      D
Sbjct: 102 VHGSDEQQRSYLRQLASGE-------------LIGSFCLTEPSAGSDVSALSTTAHLDGD 148

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y LSG K ++++   +  +++ A++E   G   +   + +    GL   R+++K+G R
Sbjct: 149 D-YVLSGQKTYVTNGDRAGIYLIFAKLEPGRGRDGIALFIVERKARGLSVVRVEDKMGLR 207

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T ++   +       L+G+ +              +    M +   + +L     YA
Sbjct: 208 ASGTAQIALDDVRVTKNQLVGEADEGFRIALGTLNGSRVGIGAMCLGVAKEALELGWQYA 267

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R + G  + D  V + A AD+ ++I A  ++ +R A         + E       A I
Sbjct: 268 HERELFGQTVGDFQVTQHAFADMEVEIFAIESMVYRTARRLSNGDDVAAE-------ASI 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  + A  ++  +++  GG+GY+++ +I R YR+     I  G+      +V  +++
Sbjct: 321 CKIFATEAAQRIVDRSLQMHGGAGYLKDSAIERLYRDIRVARIYEGANEVQRNNVYRVMK 380

Query: 460 K 460
           +
Sbjct: 381 R 381


>gi|83311123|ref|YP_421387.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82945964|dbj|BAE50828.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 554

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/479 (17%), Positives = 161/479 (33%), Gaps = 44/479 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +    R+   DG                       + +   A +    ++S +
Sbjct: 65  RVVMPQPFVDAYRQFAGDGWQGLAVPEEDGGQGLPHILASALSEMLSGACITYQMVLSLA 124

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +   +A   +      W P++ + E             V   + LTE + G+D+  + 
Sbjct: 125 HGAMRTLAASGSEAQRAAWIPRLAAGE-------------VLATMCLTEAQAGSDLGLVR 171

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEG------RVGCFLVPRLLE 263
           +     +DG + +SG K F+S    +        ++LA+          +  FL P  LE
Sbjct: 172 TMASPQADGSWSISGGKIFISGGDQNLTGGQIMHLVLARTPDAPAGVKGLSLFLCPSHLE 231

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DGS N +   RL+ K+G  ++ T ++ F      ++G        +  M     LD A+ 
Sbjct: 232 DGSRNAISVVRLEEKMGMHASPTCQVAFDGARAEIIGAPGEGLARMFTMMNAERLDVAVQ 291

Query: 324 SVSGMRVSLAEAIHYARRRHVS-----GGI--LIDQPVMKRAIADIALDIAAATALSFRL 376
            V    V+L  ++ YA  R        GG   +     ++R +           A+  R 
Sbjct: 292 GVGLAEVALQRSLAYANERKQGRAGKDGGPDFIAKHGDVRRMLLAQMALAMGCRAMVMRT 351

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               +         A   +M P+ K +  + A      A++  GG G++ E  + +  R+
Sbjct: 352 LVDLELGDRP----ALMELMTPVAKAFATEAAMEAADHAIQVHGGYGFLREYRVEQILRD 407

Query: 437 SPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
                I  G+       V   + +        +  + +E+ +G +            +L 
Sbjct: 408 GRITRIYEGTNGIQAATVAGRVIRLDNGRALTEFKAEVEESMGLASPAFAGA--LGRALA 465

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
             D+  A  L  +    ++ + L   G+      +   R      + H     R  A  
Sbjct: 466 AWDEASAAMLGRRDIGLTATSYLRLTGLLAFGAAW--ARL--EAKAEHAANPARIRAVA 520


>gi|170721232|ref|YP_001748920.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169759235|gb|ACA72551.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 582

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 94/517 (18%), Positives = 175/517 (33%), Gaps = 63/517 (12%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH-AYGPGGERWD--KVEFHPAWHAL 106
            P+    +LE     +     QE AR +      L+      G R +  +V     + A 
Sbjct: 27  LPAYADVDLE-----LALQVLQEAARFSEQVLAPLNAPGDRQGCRLEQGRVRTPDGFAAA 81

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R  +  G      +                  +   +          +  +   +    
Sbjct: 82  YRAYVDGGWPALACEPRCGGQGLPLVLDAAVQEMLFASNHGWAMYTGIAHGAYLCLKAHG 141

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           + ++   + P I S              +    + LTE + G+D+A +  + + + DG Y
Sbjct: 142 SAQLQARYLPGIVSG-------------ASLPTMCLTEPQAGSDLALLRCRAEPLGDGSY 188

Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRL 275
            ++G+K F+S    D       ++LA++         +   LVP  LE G  NG+    L
Sbjct: 189 AVTGNKLFISGGDHDLTRDILHLVLARLPDAPAGSRGLSLLLVPNGLEGGVGNGVQCDGL 248

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           ++K+G R +AT  L F    G+L+G  +     +  M     L   +  +     +   A
Sbjct: 249 EHKLGIRGSATCALRFEGGKGWLVGQAHGGLAAMFVMMNSARLHVGLQGLGHAEAAWQLA 308

Query: 336 IHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             YA  R                   +   P M+  + ++ +       L +  A+  D 
Sbjct: 309 RDYALERRQMRAPGHSPSAGDAAADPIHLHPAMRLTLLELRVRTEGMRTLGYWTAHWLDV 368

Query: 383 AKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A +      R++ +  A ++ PI K        ++ ++A++  GG GY  E  I +  R+
Sbjct: 369 AGASTDPALRAKASTLAALLTPIIKAAFTDYGFSLSSKALQVFGGYGYTCEFPIEQVLRD 428

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK-------VITIL 487
           S    I  G+       L +  +L  G   F  L   L  + G+           V   L
Sbjct: 429 SRIAMIYEGTNEIQANDLLLRKVLGDGGEGFALLLGELRAEAGAGQGAAAEALGTVCDRL 488

Query: 488 RDSISLCKEDKGLARFLTEKIA---LASSAAALYRAG 521
           +  ++  +           + A   L   A AL    
Sbjct: 489 QGVVAEVERSAAHGPQYPYRAAGAFLQLCATALQAFA 525


>gi|324999463|ref|ZP_08120575.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 390

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 123/358 (34%), Gaps = 24/358 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           + +   G++       +                 +         M+  +    ++A    
Sbjct: 44  KAAATQGVYALAVPEEYGGAGETDYRFRMIVNEEIARTGATSFGMTIGLQDDLVLA---- 99

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--- 224
                 +   + + E      AP  +  +   L +TE   G+D+  I +  ++  DG   
Sbjct: 100 ------YLLDLTTAEQKQRWLAPFAQGQMLGALAMTEPGTGSDLQGIRTSARRDGDGPDA 153

Query: 225 IYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L G K F+SS MS  F+++A + +   G      L+ +    G    R   K+G  +
Sbjct: 154 DWILDGQKTFISSAMSADFVIVAVRTDPDAGSRGFSLLVVEEGMEGFTRGRRLEKVGLHA 213

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F       G L+G        +        L       +  R    E   Y  
Sbjct: 214 QDTGELFFDGVRVPAGNLIGTEGRGMHHLMSHLPQERLGLISGGYTAARAVYEETARYCF 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D    + A+A++  ++  A A   R   +F+  +    EAA  +      
Sbjct: 274 DRAAFGRSIGDFQNTRFALAEMETELDVAEAYVDRCVRAFNADQLTPVEAAKGKW----- 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  ++   +    ++  GG GY+ E  +AR Y +    +I  G+   M   V   +
Sbjct: 329 --FITELQKRITDRCVQLHGGYGYMIEYPVARAYADCRIQTIYGGTTEIMKEIVGREI 384


>gi|257791606|ref|YP_003182212.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|257475503|gb|ACV55823.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
          Length = 379

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 137/379 (36%), Gaps = 35/379 (9%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+ +  P    +    +  GL    +      V       ++             
Sbjct: 26  RAAAIDEEDEFP--QDIYELFVEQGLFALAYGEEHGGVEVSMHCWVQVIERIARESPAVA 83

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            ++  S   +  +    +    +   P + + E               I   LTE   G+
Sbjct: 84  LMILISAIGSDALVFSGSAEQQRAILPALAAGE-------------AKICFALTEPNAGS 130

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSP 267
           DI+AI++      DG     G  +  +  + D F + A+V  +G+         +     
Sbjct: 131 DISAISTTALPDGDGYTINGGKIFITNGAVGDWFTVFARVVEDGQSKP---SCFIVHRYT 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            GL   R ++K+G R + T +L F N      G   V     +   I  + L+   ++V+
Sbjct: 188 PGLVIGRKEDKMGLRGSVTSQLYFENMHV---GPEAVVGEVGDGFAIAHHTLNRGRLAVA 244

Query: 327 GMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +   +     A A  YA+ R   G  + D   ++  +AD+ + + A+  L  + A++F 
Sbjct: 245 ALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEITLEASRLLLDQAASAF- 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  +       A + K +C + A      A++  GG G  ++  + R+YR++ + +
Sbjct: 304 -----GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLCKDYPVERYYRDAKSFT 358

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I+ G+       +   + K
Sbjct: 359 IVEGTSQVQRSLIAKSVLK 377


>gi|121636127|ref|YP_976350.1| putative acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224988600|ref|YP_002643287.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121491774|emb|CAL70236.1| Probable acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224771713|dbj|BAH24519.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 388

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 135/370 (36%), Gaps = 34/370 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTLFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K +  ++A  +   A+   GG GY  E  + R++R+SP   +  G+  
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDSPLMILGEGTNE 372

Query: 449 AMVLDVLNLL 458
                +   L
Sbjct: 373 IQRNVIAGQL 382


>gi|89054400|ref|YP_509851.1| butyryl-CoA dehydrogenase [Jannaschia sp. CCS1]
 gi|88863949|gb|ABD54826.1| Butyryl-CoA dehydrogenase [Jannaschia sp. CCS1]
          Length = 381

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 147/400 (36%), Gaps = 29/400 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS  AQ +  MA           P    W++    P   AL  +    G        
Sbjct: 2   DFQLSEEAQAIYDMARAFGE--AEIAPHARDWERDGTIP--KALWPKLAELGFAGLYVSE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   +            A       +S     A M+    +  +   + P+  S E
Sbjct: 58  ENGGSGLSRLEATLVFEALSEACASVAAFLSIHNMCAKMIETFGSDEMRATFLPRALSME 117

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                              LTE   G+D AA+ ++ ++ ++G Y L+G K F+S    SD
Sbjct: 118 -------------TVFSYCLTEPGSGSDAAALKTRAERTNEG-YALTGTKAFISGGGYSD 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           A+I++ +  G  G   +  ++ +   +GL +  L++K+G RS  T  ++  +       L
Sbjct: 164 AYIVMCRT-GEDGPRGISAVVVEDGADGLSFGGLEDKMGWRSQPTRAVQLDDCAVPAANL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+                L+ A  S+     +L   + Y   R   G  +     ++  
Sbjct: 223 LGEEGHGFRYAMAGLDGGRLNIAACSLGAAAAALRGTLAYMGERQAFGQSIDQFQALQFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +++ AA     + A   D        A+ A     + K +C +    +  + ++ 
Sbjct: 283 LADMEIELEAAKIFLRQAAWKLDTG------ASDATKACAMAKKFCTEAGSRIADQCLQL 336

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ +  I +  R+   + IL G+   M + V   +
Sbjct: 337 HGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRMIVSRQM 376


>gi|111024923|ref|YP_707343.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|40787236|gb|AAR90153.1| putative acyl-CoA dehydrogenase [Rhodococcus sp. DK17]
 gi|110823902|gb|ABG99185.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/373 (21%), Positives = 138/373 (36%), Gaps = 33/373 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R DK      W      +    L        +        ++  A  +  +A++ A    
Sbjct: 33  RADKALPRDFWLE----AGKHDLLGLEVPAEYTG-GDAGDYRFNAVLIEELAKVNAALAS 87

Query: 153 SPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           S S+     A  +  +TT      W P + S E             V   +G+TE  GG+
Sbjct: 88  SVSIHCDVVAPYLVQLTTDEQKVRWLPGVCSGE-------------VLTAIGMTEPAGGS 134

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPN 268
           D+AA+ +   +  DG + LSG K F+++  S   +++ A+         +     + S  
Sbjct: 135 DLAALKTTAVRDGDG-WLLSGAKTFITNGYSADLVVIAARTSPEKKAKGITLFGVETSLP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G     T EL   N       ++G+L+     +        L  A+ ++
Sbjct: 194 GFERGRKLDKVGQDEADTAELFLDNVRVTDAHVIGELDRGFIHMMSFLPQERLGCAVSNL 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +     L E + Y R R   G  +      K  IAD+   I    A   +   +    + 
Sbjct: 254 AHAAQILVETVDYCRERTAFGQSIGTFQHNKFLIADLVTQIEVTQAYVDQCVAAHAAGEL 313

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S +AA A+        W   +   VI   ++  GG GY+ E  +AR +R++  + I  G
Sbjct: 314 TSVDAAKAKW-------WTADVQNRVIDHCVQLHGGYGYMNEYRVARAWRDARVSRIWAG 366

Query: 446 SGNAMVLDVLNLL 458
           S   M   +   L
Sbjct: 367 SNEIMKELIGRDL 379


>gi|148545434|ref|YP_001265536.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148509492|gb|ABQ76352.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 393

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|111017325|ref|YP_700297.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110816855|gb|ABG92139.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 396

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 143/361 (39%), Gaps = 37/361 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    G    +    +  +                A +    L++      +    
Sbjct: 52  ELRQKMAELGFFGVLIPEEYGGLGLGVFEYALIVEELARAWMSVSSLITRGQQFTAGF-- 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    +++ P++ + ++                  L+E   G+D+AA++++ ++ +DG
Sbjct: 110 --TEEQRREYLPRMATGDF-------------LSAFALSEPDAGSDVAALSTRARREADG 154

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG--------RVGCFLVPRLLEDGSPNGLCYQRLK 276
                   W   +  +D   + A+            + CF++P+   +  P G+    + 
Sbjct: 155 WRISGQKMWCTFADGADYLQVFARTSPIDRDHRSRGISCFIMPKPRGE-LPPGVTGTPV- 212

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            KIG     T EL F N +     ++G                 + +A  ++   R +L 
Sbjct: 213 RKIGYHGWKTWELSFDNAYAAGDSMVGPEGEGFKVAMGDLETARIHTAARAIGVARGALE 272

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +++ YAR+R   G  + +   ++  IA +A ++ AA +L +R+    D  +  + EA+  
Sbjct: 273 DSVAYARQRVQFGRPIGENQAIRFKIAHMATEVEAARSLMYRVCTEVDAGRRNTVEASMV 332

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           + +A        +MA  V +EA++  GG+GY  + ++ R++R++    I  G+    +  
Sbjct: 333 KYLA-------TEMAERVTSEALQIHGGAGYTTDFAVERYWRDAKLTKIFEGTSEIQLKI 385

Query: 454 V 454
           +
Sbjct: 386 I 386


>gi|301060097|ref|ZP_07200967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300445799|gb|EFK09694.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 387

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/392 (19%), Positives = 141/392 (35%), Gaps = 28/392 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q L  MA     +     P  + WD+  + P +   ++     G   ++   
Sbjct: 2   DFGLSEELQMLRDMARDFAAE--KIAPFADEWDENHYFP-YEEAIKPMGELGFFGTVIPE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +          I        A       +   ++  A  +    T  + + + PK+ S 
Sbjct: 59  QYGGNEMGWLAAIILTEEIARASSSLRVQINMQTLGCAFTIFRYATDDIKEKYIPKLVSA 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY               G G+TE   G+D+ A+ S  Q   D         W  ++ ++D
Sbjct: 119 EYMG-------------GFGITEPNAGSDVMAMKSTAQDKGDHWLINGSKTWISNTSVAD 165

Query: 242 AFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             I  A  +       +    +E  + NG+    L +K+G+RS+ T E+   +T      
Sbjct: 166 VLIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSSPTGEIYLEDTKVPKEN 224

Query: 301 DLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L         V        L +A   +   +  L  A  Y + R   G  +    + + 
Sbjct: 225 ILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAATSYCQEREQFGKSIGQFQMNQD 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  I  ++ AA  + ++ A   D+    +       +     KY   ++A      AM+
Sbjct: 285 MVGQITSELEAARLVVYKAAWQKDQGNLGN------TLEVAQAKYVAGEIAVKASQVAMK 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            +G  GY  E  +AR+YR++P   ++ GS N 
Sbjct: 339 ILGAYGYSTEYPVARYYRDAPTYQLVEGSTNI 370


>gi|226943201|ref|YP_002798274.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718128|gb|ACO77299.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 383

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 131/380 (34%), Gaps = 38/380 (10%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + W+K      W   AL+ +    GL   +    +            A         
Sbjct: 27  PRAKEWEKA----GWIDDALVAQMGELGLLGMVVPEEWGGSYIDYVAYALAVEEISAGDG 82

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G LMS   +      L   +      W  ++                       LTE 
Sbjct: 83  ALGALMSIHNSVGCGPLLQYGSQAQKDAWLAEL-------------AAGRAIGCFCLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLED 264
           + G++   + ++ +   D  + L G K F+S+       I+ A  +  +G   +   L  
Sbjct: 130 QAGSEAHNLRTRAELAGD-RWILDGAKQFVSNARRAKLAIVFAVTDPELGKKGLSAFLVP 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIM 323
               G   +R ++K+G R++ T  +  S          N+     + + I L  L+   +
Sbjct: 189 TDTPGFVVERSEHKMGLRASDTCAVNLSGCSIPA---ENLLGERGKGLAIALSNLEGGRI 245

Query: 324 SVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   + +       A+ YAR R   G  + +   +   +AD+   + AA  L    A 
Sbjct: 246 GIAAQALGIARAAFEAALAYARERVQFGKPICEHQSIANLLADMHTRLNAARLLILHAAR 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                     E       A   K +  +MA  V + A++  GG GY+E+  + R+YR++ 
Sbjct: 306 LKGAGLPCLSE-------ASQAKLYASEMAERVCSSAIQIHGGYGYLEDYPVERYYRDAR 358

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     L +   L
Sbjct: 359 ITQIYEGTSEIQRLLIAREL 378


>gi|224162418|ref|XP_002338440.1| predicted protein [Populus trichocarpa]
 gi|222872331|gb|EEF09462.1| predicted protein [Populus trichocarpa]
          Length = 332

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 122/353 (34%), Gaps = 28/353 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C+     +        H+           L      S     A  +    T    
Sbjct: 2   ELGLLCTDIPEDYGGGGGDFRHEAVIHEEMARRALSGMS-NSVHSIVAHYLLNHGTEAQK 60

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P              M +  +   + +TE   G+D+  + ++ + + DG Y ++G 
Sbjct: 61  RKYLP-------------AMARGELVGAIAMTEPGAGSDLQGVRTRAE-LRDGRYRINGS 106

Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVEL 289
           K F+++ + +   +++ + +   G      L+ +     G    R+ +K+G ++  T EL
Sbjct: 107 KTFITNGLLAGLILVVCKTDPAQGARGTSILIVETKDCAGFRVGRVLDKMGMKAQDTSEL 166

Query: 290 EFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F +        L G        +        L   + +++ M  +    + Y R R   
Sbjct: 167 FFDDVTVPQDALLGGREGQGFYQLMGDLPYERLIIGLAALACMEGAYEATLAYVRERRAF 226

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  + D    +  +A++A  +    A   R           +  A+ A       K W  
Sbjct: 227 GQAIADMQNTRFKLAEVATTLTVGRAFIDRCVEQLVAGTLDTATASMA-------KLWGS 279

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +    V+ E ++  GG GY+ E  + R Y ++    I  G+   M   +   L
Sbjct: 280 EAQGRVLDELVQLHGGYGYMNEYMVTRMYADARVQRIYGGTSEIMKEVISRAL 332


>gi|217973729|ref|YP_002358480.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS223]
 gi|217498864|gb|ACK47057.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223]
          Length = 596

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 90/478 (18%), Positives = 181/478 (37%), Gaps = 57/478 (11%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV     +    ++ + +G      D  +      +   I A  +     +        +
Sbjct: 71  KVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNMAFAMYPGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             + + +    +  + + +  K+ S E+  T             + LTE   GTD+A + 
Sbjct: 131 HGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESHAGTDLALLR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++   +S+G++ ++G K F+SS           ++LA++         +  F VP++L +
Sbjct: 178 TKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVN 237

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           G      PN L    L++K+G   N+T  + F    G L+G+ +     +  M     L 
Sbjct: 238 GDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLG 297

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             +  +    ++   A+ YA+ R  S               ++    ++R +        
Sbjct: 298 VGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNE 357

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A AL  + A   DEA+  ++ A        A +  P+ K +          +A +  GG
Sbjct: 358 GARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNACVDAQQVFGG 417

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL--- 476
            GYI E  + +  R+S    I  G+     LD++   LL       +Q  + + + +   
Sbjct: 418 HGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSH 477

Query: 477 --GSSGKKVITILRDSISLCKEDKG-LARFLT--EKIALASSAAALYRAGMNDIADVF 529
              ++ +  ++ L D     ++  G LA        I  A+S A L   G+  +A ++
Sbjct: 478 STNAAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMW 535


>gi|315444744|ref|YP_004077623.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263047|gb|ADT99788.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 403

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 131/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +              I A           
Sbjct: 28  PAAAEWDEREETP--WPIIQEAAKVGLYSMEFFAEQAAEP-SGLGMIVAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ VA   TP    +W P++F    DP                 +E   G
Sbjct: 85  ALAILGTGLAAASVAANGTPEQVGEWVPQMFGSVDDP----------KVAAFCSSEPNAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ +I ++ +     D         W  +  +++  +++A V   +G       +    
Sbjct: 135 SDVGSILTRARYDEATDEWVLNGTKTWATNGGIANVHVVVASVYPELGTRGQVSFIIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----------- 315
             GL   +   K G R++ T E+   +      G + V      D +I            
Sbjct: 195 TKGLSQGQKFLKHGIRASHTAEVVLDDVRIP--GRMIVGGKERFDARIAKVREGKKAAGQ 252

Query: 316 --------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                          M+V   R +   A  YA  R   G  + +   +   +AD+   I 
Sbjct: 253 AAMATFERTRPTVGAMAVGVARAAFEYARDYACEREQFGRKIGEFQGVAFKLADMKARID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        K      A+      + K    + A  V  EA++ +GG+GY  E
Sbjct: 313 AARLLVYRAGWMARNGK------AFESAEGSMAKLVASETAVYVTDEAIQILGGNGYTRE 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L +   +
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVMARAI 397


>gi|187919735|ref|YP_001888766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718173|gb|ACD19396.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 601

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/551 (17%), Positives = 189/551 (34%), Gaps = 75/551 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           A       +  +   +   +   ++ A   R+A+ + PQ       G+R   V       
Sbjct: 29  ARHADHSRETFDAALDTAHTVAVEKFATHNRLADEHEPQF-----DGQR---VTLPAEVK 80

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             L      G   +  D  +  +            L+  A +        +  +A+++  
Sbjct: 81  DALDAMRASGFLAAGKDYEWGGMQLPSVISFACLSLFKSANIATASYAMLTTANANVIER 140

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + +   +F      T             + LTE + G+ ++ + +     +DG
Sbjct: 141 FGSETQKRKYLQALFEGRAFGT-------------MALTEPQAGSSLSDLVTSATPNADG 187

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPN 268
            Y + G+K F+S    +       ++LA++ G       +  F VP+   +     G+ N
Sbjct: 188 TYSIRGNKIFISGGDHELSENIVHLVLARIPGGPPGVKGISLFTVPKFHVNEDGSLGARN 247

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    L +K+G R   +  L F       G L+G+ +     +  M     +   + +V
Sbjct: 248 DVALAGLIHKMGWRGTTSTMLSFGEHGECIGELVGEPHHGLAYMFHMMNEARIGVGLGAV 307

Query: 326 SGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSF 374
                    ++ YAR R                 LI+   ++R +      +  A AL  
Sbjct: 308 MLGYRGYLASLDYARERPQGRRPDNKNPLDPQLPLIEHADVRRMLLAQKAYVEGAYALCL 367

Query: 375 RLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   DE  +      R+E      ++ P+ K W  +      + A++  GG GY  E 
Sbjct: 368 YAARLVDEQNTGESETVRAEAGLLLDLLTPVVKSWPSQWCLEANSLAIQIHGGYGYTREY 427

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGK----- 481
            + + YR++  N I  G+     +D+L      K     +QL   ++Q +G++ +     
Sbjct: 428 PVEQFYRDNRLNMIHEGTHGIQAIDLLGRKVTMKQGAALKQLAREIQQTIGTAREHPALH 487

Query: 482 -KVITILRDSISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIADVFLENRFLDNC 538
                +      L    + L   LT +   ALA++ A L   G   IA  +L        
Sbjct: 488 AHADALGAAWTDLTATVEALLPTLTHESERALANANAFLEAFGHIVIAWTWLR-----QA 542

Query: 539 HSTHCMLHGRF 549
              +  L    
Sbjct: 543 IVANAALSASH 553


>gi|254514065|ref|ZP_05126126.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676308|gb|EED32673.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 391

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 147/380 (38%), Gaps = 30/380 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH--LM 152
           ++V F  A+   L   I    H   W  +   +V ++A +    R +LM   E  +  + 
Sbjct: 9   EQVMFRDAYRKFLSSEIVP--HMESWREA--GIVDREAFRKAGERGFLMVWPEEKYGGMG 64

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSR------------EYDPTNKAPMQKTSVAIGL 200
            P      ++   T      DW   + SR            E               + +
Sbjct: 65  DPDFRFEQVIIEETAYARVGDWYSTLHSRLVGPYFTRFGTEEQCQRFLPGCASGETILAI 124

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
            +TE   G+D+A + S   +  +  + L+G K ++S+ + +D  I+ A+ +       + 
Sbjct: 125 AMTEPDAGSDLAGMRSTAVEEGEH-WVLNGSKTYISNGINADVVIVAAKTDPENNPHAMT 183

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             + +    G    R   K+G ++  T EL F++       +LG+ +     + +     
Sbjct: 184 LFIVERGMEGFERGRNLEKMGMKAQDTAELFFNDVRIPKANVLGEPHKGFIYLMEGLAEE 243

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A   ++  ++S      Y + R   G  L      +  +A++  D+  A     + 
Sbjct: 244 RLIGACGYLAAAQLSWDLTCAYVKERKAFGKPLAAFQNTQFKLAELRTDLDIAQNYVDQC 303

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +F+  +  + +AA A+++         ++   V    ++  GG+GY++E  I+R + +
Sbjct: 304 VAAFNAGQLNAVDAAKAKLVT-------SELQVKVADIGVQLHGGAGYMDEYPISRQFTD 356

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +   ++  GS   M + V  
Sbjct: 357 AKIATVYAGSSEVMKIIVSR 376


>gi|302189846|ref|ZP_07266519.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 600

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 91/516 (17%), Positives = 175/516 (33%), Gaps = 68/516 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAIDAFL----EAGFLNASRDFDAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFADDEQKQRFL-------------QPMLEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G+ N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G  +     +  M     +   + +          ++ YAR R             
Sbjct: 277 GYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARERPQGRLPDSKSPDS 336

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I+   ++R +      +  A  L    +  FD+         R        ++ P
Sbjct: 337 KPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDRKHAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L   
Sbjct: 397 VVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA----- 509
           L + G    +QL   +    +   +   +  + +    L    + +   L   +A     
Sbjct: 457 LAQNGGTGLKQLLRLISATCERAQAHPSLDELRQPLQQLVARVQAVTLGLLTDLAQGRIT 516

Query: 510 --LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
             LA+SA  L   G   +   +LE         +  
Sbjct: 517 STLANSALYLKAFGHAAVGWRWLEQAIRAEEGLSRG 552


>gi|149279058|ref|ZP_01885192.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149230337|gb|EDM35722.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 596

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/425 (15%), Positives = 150/425 (35%), Gaps = 42/425 (9%)

Query: 95  DKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           D+++        +L+ ++   GL        +    +     +  A +       A  L 
Sbjct: 54  DRIDTQEEGLMPSLMDKAGELGLLGVSIPEEYGGFGKNFNTSMLVADVIGAGHSFAVALS 113

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +      +         + + PK+ + E+                  LTE   G+D  
Sbjct: 114 AHTGIGTLPILYYGNAEQKEKYIPKLGTGEWK-------------AAYCLTEPNSGSDAN 160

Query: 213 AITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +  ++ +   DG          W  +   +D FI+ A+++       +   + +    G+
Sbjct: 161 SGKTKAKLADDGQHYLITGQKMWITNGGFADIFIVFAKIDDDA---NLTAFIVERGFGGI 217

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIYLDSAIMSVSG 327
                ++K+G + ++T ++ F++    +   L           ++  +  +  A  ++  
Sbjct: 218 TMNPEEHKMGIKGSSTRQVFFNDCPVPVKNMLSDRQNGFKIAVNILNIGRIKLAAAAIGA 277

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  +  AI+YA  R      +     ++  +A++A  + A  + ++R   + D+A    
Sbjct: 278 SKSVIDTAINYANERLQFDRPISKYGAIRYKLAEMAAKVYAVESANYRAGQNIDDAYDAL 337

Query: 388 EEAAYAR------------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
             A                +   I K W  ++   V+ E ++  GG G+  E  + R YR
Sbjct: 338 VAAGMDASKAKLKSTEQFAVECAILKVWGSEVLDYVVDEGVQIYGGMGFSAEAPMDRAYR 397

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           ++  N I  G+     L  ++++ K       +   L  DL +    V   L       +
Sbjct: 398 DARINRIFEGTNEINRLLTVDMMLK-----RAMKGEL--DLMTPATAVAAELMSIPDFGE 450

Query: 496 EDKGL 500
           ED  L
Sbjct: 451 EDDAL 455


>gi|31791393|ref|NP_853886.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium bovis AF2122/97]
 gi|215425420|ref|ZP_03423339.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T92]
 gi|215433136|ref|ZP_03431055.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
 gi|260199217|ref|ZP_05766708.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T46]
 gi|260203360|ref|ZP_05770851.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis K85]
 gi|289441591|ref|ZP_06431335.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis
           T46]
 gi|289572795|ref|ZP_06453022.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85]
 gi|289748691|ref|ZP_06508069.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92]
 gi|289756280|ref|ZP_06515658.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
 gi|31616978|emb|CAD93085.1| PROBABLE ACYL-COA DEHYDROGENASE FADE3 [Mycobacterium bovis
           AF2122/97]
 gi|289414510|gb|EFD11750.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis
           T46]
 gi|289537226|gb|EFD41804.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85]
 gi|289689278|gb|EFD56707.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92]
 gi|289696867|gb|EFD64296.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054]
          Length = 388

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 135/370 (36%), Gaps = 34/370 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTLFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+  
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMILGEGTNE 372

Query: 449 AMVLDVLNLL 458
                +   L
Sbjct: 373 IQRNVIAGQL 382


>gi|302870352|ref|YP_003838989.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302573211|gb|ADL49413.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 379

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 139/378 (36%), Gaps = 34/378 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P   +L   +   GL    +  S                  L + +    ++
Sbjct: 30  DWERAGEVP--RSLHETAAKIGLLGIGFPESVGGSGGD----------LLDSMVVTEEII 77

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDP---TNKAPMQKTSVAIGLGLTEKRGGT 209
               +S  + AL T    H    P +   + +        P    ++   L +TE  GG+
Sbjct: 78  RSGGSSGLVAALFT----HGIALPHMVETQDEGLIDKYVRPALAGTMIGALAITEPDGGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A I +   +  D  Y ++G K +++S +   F+  A      G   V  L+ D    G
Sbjct: 134 DVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVCTEFPGSGSVSLLVIDKGTPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVS 326
               R   K+G   + T EL F +    +   +         +        L  A  + +
Sbjct: 193 FTVGRRLEKLGWHCSDTAELSFVDVRVPVTNRVGPEDTGFLAIMQQFANERLSLATQAYA 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  A+ + R R   G  L+ + V++  +A++     AA A    +A      +  
Sbjct: 253 TAQRCVDLAVQWCRDRQTFGRPLVGRQVVRHKLAEMHSRTDAARAYVHDVAERVAAGQPV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E A A+ +A  T  W       V+  A++  GG GY+ +  + RHYR++    I  G+
Sbjct: 313 VTEVAMAKNVAVATCDW-------VVDAALQLHGGFGYMRDAEVERHYRDARLLGIGGGT 365

Query: 447 GNAMVLDVLNLLEKGTNL 464
              M      ++ KG  L
Sbjct: 366 TEIM----NEIIAKGMGL 379


>gi|298206608|ref|YP_003714787.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83849238|gb|EAP87106.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 386

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 139/359 (38%), Gaps = 28/359 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVA 163
           +  +    G     +   +  +     + +              A  + + +  + + + 
Sbjct: 39  IWEKFGEMGYFGLTYPEQYGGLGLDFFYTVIFLEELQRVNSGGFAAAMWAHNYLAMTHLN 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                R+ + +     S E                 L +TE   G+D+AA+ +   K  D
Sbjct: 99  AEGDERIKEKYLSASISGEM-------------IGCLCVTEPFCGSDVAAMRTTAVKKGD 145

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y ++G K F+++ + SD  ++ A+    +G   +   + D    G+   +L NK+G R
Sbjct: 146 -KYIINGSKTFITNGVYSDYLVVAAKTAPELGNKGMSMFVIDRDTKGVSATKL-NKLGWR 203

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+ F N       L+G+       +        L   I + +    +L  A+ Y 
Sbjct: 204 ASDTGEIAFDNVEIPAENLMGEEGKGFPYIMQHFASERLIMGINAHARAEFALEYAMDYM 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +     ++  IA    ++  A   ++ ++    E +   +EA+ ++++   
Sbjct: 264 KEREAFGRSIDKFQALRHIIAQRVSEVEMAKTFNYTVSKRLSENEYVVKEASMSKLL--- 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 K+A   I + ++ +GG GYIEE  +AR  R+S    I  G+   +   +  ++
Sbjct: 321 ----STKIADETIYDCLQMLGGYGYIEEYPMARLLRDSRLGPIGGGTSQILKEIIAKMV 375


>gi|262200469|ref|YP_003271677.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262083816|gb|ACY19784.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 382

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 150/403 (37%), Gaps = 41/403 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             L  +A+E   +A    P    +   G+  D+         + +++   GL        
Sbjct: 11  EALRASAREF--LARECAPHNEEWEAAGQ-VDR--------EIYKKAGDAGLLGFNIPEE 59

Query: 124 FEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           F      +  +  A  +   A+ +  A  L   +         +      K W P + S 
Sbjct: 60  FGG-GGSEDFRFNAVVVEEFAKFDGAAPGLSLQNDVLVPYFLHLANDEQRKRWMPGMASG 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-S 240
           E               + + +TE   G+D+A I +  +   D  Y ++G K F+S+ + S
Sbjct: 119 E-------------TILAVAMTEPGAGSDLAGIKTSAKDDGDH-YIVNGSKTFISAGINS 164

Query: 241 DAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           D  +++ +   +   G      L+ +    G    R  +K+G +S  T EL F+N     
Sbjct: 165 DLVVVVCRTNPDPAAGHKAFSLLVVERGMEGFERGRKLDKMGLKSADTAELHFNNVRVPK 224

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LLG+ N     +        L  AI +++G R    E + Y + R   G  +      
Sbjct: 225 ANLLGEENKGFYHLMQNLPSERLSIAIGAIAGARAIFDETLQYTKDRKAFGKPIGTFQHN 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+IA ++  A           D       +     + A   K+WC ++   VI   
Sbjct: 285 RFVLAEIATELDLAEVY-------IDRCLQGVLDDELTAVDASKAKWWCTELGKRVIDSC 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY+ E  +AR Y++S   +I  G+   M   +   L
Sbjct: 338 VQLHGGYGYMNEYRVARAYKDSRIQTIFGGTTEIMKDIIGRDL 380


>gi|326381781|ref|ZP_08203474.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199207|gb|EGD56388.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 385

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 134/357 (37%), Gaps = 31/357 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPR 169
             GL        F       ++K  A     MA+       S +     +  L       
Sbjct: 48  ELGLFGIEIPEEFGG-AGIDSYKFEAVITEEMARAGVTLGGSAAHIPLCLPYLLKHANDE 106

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCL 228
               W P + + E             +   + +TE   G+D+A + +  +   DG  Y L
Sbjct: 107 QKGRWLPGMATGE-------------LMWAIAMTEPGTGSDLAGMRTTAKLSEDGSHYVL 153

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           +G K F++  + +D  I+ A+          F +  L+ D    G    R  +K+G R++
Sbjct: 154 NGAKTFITGGVNADRVIVCARTSPPSETDRRFGITLLVVDTKAEGYAVGRKLDKLGLRTS 213

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F++       LLG+ N     +        L  A+ + +    ++  A  Y   
Sbjct: 214 DTAELSFTDVKVPVEDLLGEENKGFSYLGQHLPRERLSIALSAYAQGAAAVRFAKEYTLE 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R+V G  +      K  +A     + A  A+  R   ++D  +  + +AA A       K
Sbjct: 274 RNVFGKPVASFQNTKFELAACKAKVDAMEAVVDRALEAYDRHELSAADAASA-------K 326

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +C + A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   +   +
Sbjct: 327 LFCTEAAADVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMRSIIAKDM 383


>gi|254823119|ref|ZP_05228120.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 388

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 136/372 (36%), Gaps = 31/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                +  +    T      W P + +                  G GLTE   G+D  A
Sbjct: 95  GVGLGSMPIYRFGTEEQKTRWLPDLTAG-------------RALAGFGLTEPGAGSDAGA 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRVG--CFLVPRLLEDGSPNG 269
             +  +    G + ++G K F+++  +D    + +  V G VG     +  ++      G
Sbjct: 142 TRTTARLEG-GEWVINGSKQFITNSGTDITSLVTVTAVTGSVGGDKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
              + + +K+G  ++ T  L F++        L     G    + IL    +  A ++  
Sbjct: 201 FTVEPVYSKVGWNASDTHPLSFADARVPEENLLGERGRGYANFLSILDEGRIAIAALATG 260

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  + E++ Y++ R   G  +     +   IA +      A    +  A      K  
Sbjct: 261 AAQGCVDESVKYSKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPF 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA A+++A        + A     +A +  GG G++ E  +ARHYR+S    I  G+
Sbjct: 321 KKEAAIAKMIA-------SEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGT 373

Query: 447 GNAMVLDVLNLL 458
               ++ +   L
Sbjct: 374 TEVQLMLIARSL 385


>gi|307327115|ref|ZP_07606304.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887196|gb|EFN18193.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 387

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 134/378 (35%), Gaps = 28/378 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             ++E    +   L+ R    G+        +          +          +     M
Sbjct: 30  VQELEHTNTYPEALIERMKQLGVFGLAIPEEYGGTPVSTPCYVLITEELARGWMSLAGAM 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A+++    T    + + P++ + E   T             L LTE  GG+D+ 
Sbjct: 90  GGHTVVATLLLRFGTEEQKRRYLPRMATGEIRAT-------------LALTEPGGGSDLQ 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGL 270
           A+ +  +K +DG        W  +S  S    +L + +         +  LL +  P GL
Sbjct: 137 AMRTVARKDADGYVVDGSKTWITNSRRSQLIALLCKTDPDATPAHQGISILLVEHGP-GL 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVS 326
              R   K+G +   + EL F          L      G  + MK L    L  A  ++ 
Sbjct: 196 TVSRDLPKLGYKGVESCELSFDGYRAPADAVLGGVEGKGFAQMMKGLETGRLQVASRALG 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A + D  +  
Sbjct: 256 VGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTAARQLTLYAARAADAGRRV 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G+
Sbjct: 316 DMEAGMA-------KLFASETAMEIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGT 368

Query: 447 GNAMVLDVLNLLEKGTNL 464
                  +   L K   L
Sbjct: 369 NEIQRNVIAAQLVKRGGL 386


>gi|260557446|ref|ZP_05829661.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260409072|gb|EEX02375.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 379

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 132/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASM 161
             L  R   +G  C      +        + +   +    A     A  +   +   +  
Sbjct: 37  RELWLRLGENGFLCVDVPEEYGGYSAPVHYSLMLVQETAQAGFASLAVAIGGQNELVSPY 96

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  + T    + W PK+ + E             V   + +TE   G+D+ AI +Q    
Sbjct: 97  LQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQAVLE 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +D  Y ++G K F+S+ +    I+L A+ + +     +   L D + +G+   R   KIG
Sbjct: 144 NDH-YRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALDGVKKGRSLQKIG 202

Query: 281 NRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T EL F +        LG+       +        L  ++M++  +  ++     
Sbjct: 203 LHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISMMALGAILGAIELTKD 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L      +  +A+  +   AA A   + A  + + +    + A  +   
Sbjct: 263 YVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQLGVTQVAALKC-- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +   +   VI + ++  GG GY++E  I+R + ++    I  G+   M   V   
Sbjct: 321 -----FITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIMKEIVARE 375

Query: 458 L 458
           L
Sbjct: 376 L 376


>gi|39935207|ref|NP_947483.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39649058|emb|CAE27579.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 384

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 136/387 (35%), Gaps = 31/387 (8%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A+++ P+  L  +      P  + W+     PA H L ++    G         +    
Sbjct: 4   TADHDEPRRILQRFIQSDINPHVDEWENAGIFPA-HELFKKLGDLGFLGLNKPVEYGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
              ++        LM   E G +    V  A  V   M TP + +       S E     
Sbjct: 63  LDYSYA-------LMMAEELGAINCGGVPMAIGVQTDMATPALARFG-----SDELRKEF 110

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
            AP         +G++E   G+D+A I +  +   D      G  W  +   +D   +L 
Sbjct: 111 LAPSIAGDYVACIGVSEPGAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLC 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
                        +       G+   R  +K+G RS+ T ++ F          +     
Sbjct: 171 NTGEGPVHRNKSLICVPMKTKGVTIARKLDKLGMRSSDTAQIYFDEVRVPKRNRIGEEGK 230

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M       L  A   +     ++   I Y R R   G  L+D  V+   +A++  
Sbjct: 231 GFTYQMVQFQEERLWGAAACLKAHEKTIQNTIEYTRGRKAFGKPLLDNQVIHFRLAELQT 290

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++    +L +R A +    +  ++       +A + K    ++   +    ++  GG G+
Sbjct: 291 EVELLRSLVYRAAEALVAGEDVTQ-------LATMAKLKAGRLGREIPDACLQFWGGMGF 343

Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451
           + E  ++R YR+S   +I  G+   M+
Sbjct: 344 MNETLVSRSYRDSRLTAIGGGADEVML 370


>gi|83945025|ref|ZP_00957391.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83851807|gb|EAP89662.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 393

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 83/377 (22%), Positives = 143/377 (37%), Gaps = 27/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK---IRAARLYLMAQ 145
           P G+ WD+    P    L  ++   GL     D ++     + A        A  Y    
Sbjct: 35  PYGDEWDEAGDFP--WELHEKAGALGLFGFGIDEAYGGNGFEDALMRVDAGIAMGYAGVG 92

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L S  + +  +  L  +  +  +  P I +                   LG+TE 
Sbjct: 93  GVNASLGSRGIMTGPIHTL-ASDEIKAEVLPDIVAG-------------RKGGALGMTEP 138

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
            GG+D++ I ++ +K  D  + + G K F++  M +  +++ A+  G  G   +   +  
Sbjct: 139 SGGSDLSRIVTKARKDGDD-WVIDGEKTFITGGMKASWYVVGARTGGE-GFGGISLFVVP 196

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G     + NK+G   + T  L F          LG   +    + D      L  +
Sbjct: 197 ADAPGFSRTAITNKMGWWCSDTATLHFDGCRIPERYQLGQEGLCLLAIMDNFNYERLTLS 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +  L +AI YA++R   G  LI    ++  IAD++  I A  A    +A   +
Sbjct: 257 AGCLGMAKRCLDDAITYAQQRETFGKPLIKHQAIRHKIADMSGRIDALDAYLQMVAWRVN 316

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           EA  +   AA         K +  K A     EAM+ +GG+GY+   ++ R YRE    +
Sbjct: 317 EATDKG--AAMPAAELAKIKVFASKTAEFCANEAMQILGGAGYLRGCAVERIYREVKVMA 374

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS   M    +  +
Sbjct: 375 IGGGSEEIMRDLAVRQM 391


>gi|226365367|ref|YP_002783150.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243857|dbj|BAH54205.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 464

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 143/395 (36%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    +L ++  +G +  ++ R         +  +    L+       
Sbjct: 28  PVAAEHDRAQEFP--WDVLEKAAEEGFYSPLFYRDLIGDPTGLSLPLFMEELF-WGCAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + S +    TP     WAP+ F    +P N            L ++E  GG
Sbjct: 85  GLAVVMPALALSSIGQAATPEQMLRWAPECFG---EPGNL-------KLAALCISEPEGG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +   +  D         W  +  ++D  ++ A V+  +G       +  G   
Sbjct: 135 SDVRNLRTTATRDGDDWVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVPGGSP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------------- 315
           G+   R  +K+G R++ T EL+F          L         M+               
Sbjct: 195 GIELVRKLDKLGCRASHTAELKFHRVRVPADHLLGGDDKLQHRMRKAREVQEEVATGAPR 254

Query: 316 -----------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                           A  ++   R +L  A  YA RR   GG +ID   +   +AD+A 
Sbjct: 255 RKSATLGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLAT 314

Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            I AA  L++R +       + R  E + A++ A        ++A      A++ +GG G
Sbjct: 315 QIDAARLLTWRASWMAATGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +  + + YR++   +I  G+     + +   L
Sbjct: 368 YISDHPVEKWYRDAKLYTIFEGTSEIQRMVIGRAL 402


>gi|209515063|ref|ZP_03263932.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504689|gb|EEA04676.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 594

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/504 (18%), Positives = 178/504 (35%), Gaps = 62/504 (12%)

Query: 51  PSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHA 105
            S      + + L         +E AR        L+A     G  +D  KV     +  
Sbjct: 23  ASWWRDVPDWQDLDSQTAQQVLEEAARFVEERIAPLNASADLEGCHFDAGKVTTPAGFRE 82

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
                +  G      D         Q   +  A   ++A      LMSP +T  +   L 
Sbjct: 83  SYAEFVEAGWPTLSLDTEHGGQGLPQ--LLDVALQEMLAGANHAWLMSPGLTHGATACLQ 140

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKIS 222
              + RV  +  PK+ S E+                + LTE + G+D+  I S+  +   
Sbjct: 141 TYGSERVKTELLPKVASGEW-------------LSTMCLTEPQAGSDVGLIRSRATEAPG 187

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRLLED---------GSP 267
              Y + G K F++    D       ++LA+  +   G   +   +            S 
Sbjct: 188 TDGYFVDGSKIFITGGAHDLTENIVHLVLARLPDAPPGTKGLSLFVVPEWLEGDGAGRSR 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           NG+  + ++ K+G + + T  + F   FG+L+G+ +     +  M     L  A+  +  
Sbjct: 248 NGVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLNCLFVMMNAARLQVAMQGLGH 307

Query: 328 MRVSLAEAIHYARRRHVSGG---------------ILIDQPVMKRAIADIALDIAAATAL 372
              +   A  YA+ R                     +   P M+R + ++   +    A+
Sbjct: 308 AHTAWQRAHAYAQERAQMRAVSVPSGAAVASGHAAPISFHPAMRRILLELRAIVEGERAI 367

Query: 373 SFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  A+  D      +A  R + A  A ++ PI K +         + A++  GG GYI 
Sbjct: 368 GYWTAHWLDVAARHADAAERVQAAQLASLLTPIAKTFFTANGFDAASNALQVFGGYGYIH 427

Query: 427 ERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
           E  I +  R+S  + +  G+       L V  +L  G+   + L   +  +     ++  
Sbjct: 428 EYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGSAALDVLLRHVRTE-AQLCRESD 486

Query: 485 TILRDSISLCKEDKGLARFLTEKI 508
            ++R + +  +E   +    T+ I
Sbjct: 487 PLVRSAGAKLEELVEIVERTTQAI 510


>gi|170062284|ref|XP_001866601.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880243|gb|EDS43626.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 621

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/464 (18%), Positives = 167/464 (35%), Gaps = 62/464 (13%)

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLE----------AGHLMSPSVTSASMVALMTTPR 169
           W+         + H   A      A+L           A H  +        + L  T  
Sbjct: 104 WELGAMGYAIPEEHGGLALMNVQAARLGDISGGSDLAFAIHSGAHQTIGTKGILLYGTKA 163

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCL 228
               + P++ +               V     LTE   G+D A++ S+      G  Y L
Sbjct: 164 QKDKYLPQLATG-------------KVFGAFALTEPSVGSDAASVKSRAVLSPCGKYYIL 210

Query: 229 SGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQRLKNKIGNR 282
           +G K + S   ++D F   AQ    + + G     +   + +    G+     ++K+G +
Sbjct: 211 NGSKIWCSGGGIADIFTTFAQTEVVDPKTGEKKDKMTAFIVERGFEGVTTGPPESKMGLK 270

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV-----SGMRVSLAEAI 336
            + T ++ + +    +    NV        K+ +  L+S    +       MR  + +A 
Sbjct: 271 CSVTTDVYYDDVKVPV---ENVLGEVGNGFKVAVNILNSGRFGLTAMLTGTMRTCIQKAA 327

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +   R      L D   ++  +A +A+    A  L++ +A + D+        +    +
Sbjct: 328 EHVTTRVQFKRKLKDFENVQEKLAKMAMHHYVAQTLTYMVAGNMDKG-------SMDYHL 380

Query: 397 -APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV- 454
            A ITK +  +    V  EA++ +GG+GY++   + +  R+     I  G+ + + L + 
Sbjct: 381 EAAITKIFGTEAGWYVCDEAIQLLGGNGYMKATGLEQFLRDMRVFRIFEGANDVLRLFIA 440

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSG-------KKVITILRDSISLCKE-----DKGLAR 502
           L  ++   N  + L   L+  L + G       K+V        +   E      K  A+
Sbjct: 441 LTGIQYAGNQLKGLQKALKNPLSNMGTIFNEGSKRVSRSFGAGATDLSEFVVDPLKDSAK 500

Query: 503 FLTEKIALASSA--AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
             ++ I   S    + L + G   +   F+  R  D+    + M
Sbjct: 501 LCSQSIDQFSQTVESLLIKHGKGIVERQFILARIADSAIDIYTM 544


>gi|313496530|gb|ADR57896.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 393

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGAMGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|153000248|ref|YP_001365929.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS185]
 gi|151364866|gb|ABS07866.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185]
          Length = 596

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/547 (17%), Positives = 198/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S ++  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGKWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +G      PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKERLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++ A        A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q   
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSV 468

Query: 471 TLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIAL------ASSAAALYRAGM 522
            + + + S      +   +   +    + +  + +L  + A       A+S A L   G+
Sbjct: 469 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLAAQAATNPDIIGAASMAYLELFGV 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|27376093|ref|NP_767622.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27349232|dbj|BAC46247.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 345

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 118/331 (35%), Gaps = 15/331 (4%)

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
               +  +   +MA+            +  +   M TP + +       S E      AP
Sbjct: 16  GGSGLDYSYALMMAEELGAITCGGVPMAIGVQTDMATPALARFG-----SDEVRREFLAP 70

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                    +G++E   G+D+A+I +  +   D      G  W  +   +D   +LA   
Sbjct: 71  SIAGDFVACIGVSEPGAGSDVASIKTAARSDGDDYVINGGKMWITNGTQADWICLLANTG 130

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPV 309
                     +       G+   R  +K+G RS+ T ++ F N        +     G  
Sbjct: 131 DGPVHRNKSLICVPMKAKGVTVARKLDKMGMRSSDTAQIFFDNVRVPKRNRIGEEGKGFT 190

Query: 310 EDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M       L  A   +      + E I Y R R   G  ++D  V+   +A++  ++ 
Sbjct: 191 YQMIQFQEERLWGAAACLKAHEYIINETIEYTRNRKAFGQSILDNQVVHFKLAEMQTEVE 250

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
              AL +R   +    +  +        +A + K    ++   +    ++  GG G+  E
Sbjct: 251 LLRALIYRAGEALVAGEDVTR-------LATMAKLKAGRLGRELTDACLQYWGGMGFTNE 303

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ++R YR+S   SI  G+   M++ +  ++
Sbjct: 304 TPVSRAYRDSRLTSIGGGADEVMLMVLCKMM 334


>gi|256787593|ref|ZP_05526024.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289771486|ref|ZP_06530864.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289701685|gb|EFD69114.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 385

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F       +HK  A      A+       S      +   
Sbjct: 40  REFYYKLGELGIFGINVPEEFGGAGMD-SHKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  + E                 + +TE   G+D+A + S  +  
Sbjct: 99  INMLATDEQKKRYLPKFVTGEEM-------------WAIAMTEPGTGSDLAGMKSTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDRRHGISLFAVDTKSQGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAKQYVQDRTVFGKPVAHFQNTKFELAACQAEVDAAEAVVDRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKNM 383


>gi|126173955|ref|YP_001050104.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           baltica OS155]
 gi|125997160|gb|ABN61235.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155]
          Length = 596

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 97/547 (17%), Positives = 202/547 (36%), Gaps = 65/547 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  ++  +     K  + +   ++    Q +A  +      L++   
Sbjct: 7   PLRDYQF-----ILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D  +      +   I A  +     +
Sbjct: 62  LQGCKLVDGKVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGC 255
            GTD+A + ++   +S+G++ ++G K F+SS           ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP++L +     G+PN L    L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R  S               ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+  ++ A        A +  P+ K +         
Sbjct: 349 LLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470
            +A +  GG GYI E  + +  R+S    I  G+     LD++   LL       +Q  +
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSA 468

Query: 471 TLEQDL-----GSSGKKVITILRDSISLCKEDKG-LARFLT--EKIALASSAAALYRAGM 522
            + + +      ++ +  ++ L D     ++  G LA        I  A+S A L   G+
Sbjct: 469 LVTEFIKSHSTNAAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGV 528

Query: 523 NDIADVF 529
             +A ++
Sbjct: 529 TALAWMW 535


>gi|146305598|ref|YP_001186063.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573799|gb|ABP83331.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 622

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 80/451 (17%), Positives = 160/451 (35%), Gaps = 57/451 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     LR     G   +  D     +             +  A +        ++  A+
Sbjct: 97  PEVEPALRAFHEAGFLNATRDFEHGGMQLPNLLSQACFAHFQSANIATSSYSMLTMGVAN 156

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +      +   I    +  T             + LTE   G+ ++ I ++ + 
Sbjct: 157 LIEAFGSEEQKARYLQPIIDGRFFGT-------------MALTEPHAGSSLSDIRTKAEP 203

Query: 221 ISDGIYCLSGHKWFLSSPM-----SDAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y + G+K F+S        +   ++LA++         +  FLVP+   +     
Sbjct: 204 HADGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPPGVKGISLFLVPKFHVNDDGSL 263

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 264 GARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHAGLSYMFQMMNEARIGVG 323

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + ++         ++ YAR R                 +++   ++R +      +  A 
Sbjct: 324 MGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPTSPQISIVEHADVRRMLLTQKAYVEGAF 383

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+      A+ R+       ++ PI K W  +        A++ +GG GY
Sbjct: 384 DLGLYAARLFDDTQTLETAEDRTRALELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 443

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L       G    +QL   +      + + 
Sbjct: 444 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKVSMNGGAALKQLLKLINDCCQRASEY 503

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALAS 512
           + +T LR  +     ++ LAR     +AL  
Sbjct: 504 ESLTALRQPL-----EQLLARLQAVTLALLG 529


>gi|91976676|ref|YP_569335.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91683132|gb|ABE39434.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 384

 Score =  238 bits (608), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 139/393 (35%), Gaps = 29/393 (7%)

Query: 76  MANYNTPQ--LHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A++  P+  L  +      P  + W+K    PA H L ++    G         +    
Sbjct: 4   TADHEEPRRILQKFIAAEINPHVDEWEKAGIFPA-HELFKKLGDLGFLGLNKPVEYGGQG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++        LM   E G +    V  A  V           +      RE+     
Sbjct: 63  LDYSYA-------LMMAEELGAINCGGVPMAIGVQTDMATPALAKFGSDALRREF----L 111

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
           AP     +   +G++E   G+D+AAI +  +   D      G  W  +   +D   +L  
Sbjct: 112 APAIAGDMVACIGVSEPGAGSDVAAIKTTARSDGDDYVITGGKMWITNGTQADWICLLCN 171

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTG 307
                       +    +  G+   R  +K+G  S+ T ++ F          +     G
Sbjct: 172 TGDGPIHRNKSLICVPMNSKGVTIARKLDKMGMHSSDTAQIHFDEVRVPKRNRIGEEGLG 231

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M       L  A   +     ++ E I Y R R   G  L+D  V+   +A++  +
Sbjct: 232 FTYQMVQFQEERLWGAAACLKAHEGTIQETIEYTRNRKAFGKPLLDNQVIHFRLAELQTE 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +    AL +R A +    +  ++       +A + K    ++   +    ++  GG G++
Sbjct: 292 VELLRALVYRAAEALVAGQDVTQ-------LATMAKLRAGRLGRELPDACLQFWGGMGFM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  ++R YR+S   SI  G+   M+  +  ++
Sbjct: 345 NETLVSRSYRDSRLTSIGGGADEVMLGILCKMM 377


>gi|241766348|ref|ZP_04764234.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363513|gb|EER58968.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 446

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 126/362 (34%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASM 161
             L R+   +G  C+     +               +            L   +      
Sbjct: 103 RELFRQMGENGYLCADVPEQYGGPGASVHFSFAVVEVLSRRGYGGFVGGLQVHNDIVPPY 162

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    + W P++ S E                 +G+TE   G+D+ AI +  ++ 
Sbjct: 163 LLHCGTQAQRQHWLPRMASGE-------------AVAAIGMTEPGAGSDLKAIRTTAKRD 209

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  Y ++G K F+S+      ++L A+ +   G   V   L D    G    +   KIG
Sbjct: 210 GDH-YVINGSKIFISNGQHCDLLVLAAKTDPAAGAKGVSLFLVDTKAPGFTRGQNLEKIG 268

Query: 281 NRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
             +  T EL F++        L      G V+ M+ L    L   + +V G + +L   +
Sbjct: 269 QHAGDTSELFFNDLRVPADALLGGVEGQGFVQMMRELPRERLIIGVQAVHGAKGALDATV 328

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  +      +  +A  A DIAAA A       +++  +   E        
Sbjct: 329 KYVQERQAFGQAVAQFQNTRFTLAQCASDIAAAEAFLTMSVAAYERGELTPEA------- 381

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K    ++   V    ++  GG GY+ E  I+R + ++    I  G+   M   V  
Sbjct: 382 VSALKLHTTEVFGRVADACLQLFGGYGYMAEYPISRFWTDARVLRIYGGTSEIMKELVAR 441

Query: 457 LL 458
            L
Sbjct: 442 SL 443


>gi|126463158|ref|YP_001044272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104822|gb|ABN77500.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 562

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 178/486 (36%), Gaps = 44/486 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           A    F     + +E +              L R  + +  +L      G     V   P
Sbjct: 24  AATERFAEATPETVEAILAEAGKLCEEVLAPLQRPGDLHPARLE----NGV----VRTSP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R     G            +    A       +   A L        +      
Sbjct: 76  GYAEGYRAIADGGWVGIAASPEHGGMGLPMAVTTAVNEMMSSACLSLQLNPLLTQGQIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ ++ + +
Sbjct: 136 LEHHASDALKALYLPKLISGEWCGT-------------MNLTEPQAGSDVGAVRTRAEPL 182

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----G 265
            DG Y ++G K +++   +D       ++LA++         +  FLVP+ L D     G
Sbjct: 183 EDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPG 242

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +    L+ K+G   + T  +++    G+L+G  +     +  M     L   +  V
Sbjct: 243 PRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGV 302

Query: 326 SGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                +   A+ YA  R   G G +I+   ++R +A +  +  +A A++   A + D  +
Sbjct: 303 GVAEAATQAAVAYAMERRQGGPGGIIEHADVRRMLAVMKAETFSARAIALACAVALDMGR 362

Query: 385 SR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +    E  A A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I
Sbjct: 363 ATGQPEWQARAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAI 422

Query: 443 LLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
             G+     +D++   +  G     +L   +E    ++  ++  +  D  +  +  +   
Sbjct: 423 YEGTNGIQAMDLVGRKMMDGGEAAFRLLQEIEDAAETARHRLPDLANDVWAASEALREAT 482

Query: 502 RFLTEK 507
             L  +
Sbjct: 483 ETLVGQ 488


>gi|109896646|ref|YP_659901.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c]
 gi|109698927|gb|ABG38847.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica
           T6c]
          Length = 391

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 140/377 (37%), Gaps = 26/377 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQ 145
            P  E W+     P  H L ++    GL       ++       ++ +  A         
Sbjct: 30  DPFIEEWESAGIAPL-HTLFKKMGDLGLLGIHKPEAYGGSGLDYSYNLVFAEELGRAYGG 88

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   +  +   +A   +  + +++              AP     +   +G++E 
Sbjct: 89  SLPMAIGVQTDMATPALARFGSDELKREFL-------------APAVAGDMVACIGVSEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A + +  +   D         W  ++  +D   +LA             ++   
Sbjct: 136 GAGSDVAGLKTTAKSDGDDYVINGSKMWITNATQADWICLLANTSDGNVHANKSLIVVPL 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G+   +  NK+G R++ T ++ F+N        +G+ N              + +A 
Sbjct: 196 NTPGIEISKPLNKLGMRASDTGQIFFNNVRVPKRNRIGEENKGFTMQMMQFQEERMYAAA 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +  GM   + + I + + RH  G  +++  V+   +A++  ++ A  AL++R      +
Sbjct: 256 SAHKGMERMIQDTIGWCKERHTFGQPVLNNQVVHFKLAELQTEVEALRALTWRACQQHID 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        A  +A + K    ++   V    ++  GG G++ +  +AR YR++   SI
Sbjct: 316 GED-------ATYLASMAKLKSGRLWREVTDSCLQYWGGMGFMWDNPVARAYRDTRILSI 368

Query: 443 LLGSGNAMVLDVLNLLE 459
             GS   M+  +   ++
Sbjct: 369 AGGSDEMMLGIIAKHMD 385


>gi|332308288|ref|YP_004436139.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332175617|gb|AEE24871.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 384

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 138/377 (36%), Gaps = 26/377 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQ 145
            P  E W+     P  H+L ++    GL       +F       ++ +  A         
Sbjct: 23  DPFVEEWENAGIAPL-HSLFKKMGDLGLLGIHKPEAFGGSGLDYSYNLVFAEELGRAYGG 81

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   +  +   +A   +  + +++              AP     +   +G++E 
Sbjct: 82  SLPMAIGVQTDMATPALARFGSDELKREFL-------------APAVAGEMVACIGVSEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A + +  +   D         W  ++  +D   +LA             ++   
Sbjct: 129 GAGSDVAGLKTTAKSDGDDYVINGSKMWITNATQADWICLLANTSEGNVHTNKSLIVVPL 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G+   +  NK+G R++ T ++ F++        +G+ N              + +A 
Sbjct: 189 DTPGIEISKPLNKLGMRASDTGQIFFNDVRVPKRHCIGEENKGFTMQMMQFQEERMYAAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +  GM   +   I + + RH  G  +++  V+   +A++  ++ A  AL++R       
Sbjct: 249 SAHKGMERMIQNTIEWCKERHTFGQPVLNNQVVHFRLAELQTEVEALRALTWRACQQHVN 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        A  +A + K    ++   V    ++  GG G++ +  IAR YR++   SI
Sbjct: 309 GED-------ATYLASMAKLKSGRLWREVTDSCLQYWGGMGFMWDNPIARAYRDTRILSI 361

Query: 443 LLGSGNAMVLDVLNLLE 459
             GS   M+  +   ++
Sbjct: 362 AGGSDEMMLGIIAKHMD 378


>gi|297616771|ref|YP_003701930.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144608|gb|ADI01365.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 584

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/464 (16%), Positives = 157/464 (33%), Gaps = 48/464 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL  +   GL  +     +      +      A     A   A      +      + 
Sbjct: 61  RELLLMAGELGLLGTDVPEEYGGFAMDKISTSIVAECMGRAGGFAMTHGGQTGIGQLPIV 120

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      + P I S E                   LTE   G+D  A  +      D
Sbjct: 121 YFGTHEQKMKYLPGIVSGE-------------KVTAYALTEPGAGSDALAGKTWAVLSPD 167

Query: 224 G-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K F+++   +D +I+ A+++           + +    GL     ++K+G 
Sbjct: 168 GKYYILNGTKQFITNAGFADLYIVFAKIDRDK----FTGFIVEADSEGLSTGPEEHKMGI 223

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
           + ++T  +   +    +   L  +  G V    I  +     A  +V   + ++  +  Y
Sbjct: 224 KGSSTRTVILEDVKVPVENVLFEIGKGHVIAFNILNMGRYKLAGNAVGNCKFAIELSAQY 283

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSR 386
           A  R      + +  ++K  +A++      A ++ +R     D+             +  
Sbjct: 284 ANDRRQFNQPIAEFGLIKEKLAEMNTRTYIAESMVYRTGGLLDQMMHTLDLSGPDSGQVA 343

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++      +   + K +  ++   V+ E ++  GG G+  E +I R YR+     I  G+
Sbjct: 344 AKGIEEYALECSMNKVFATEVQGYVMDEGVQIHGGYGFTSEYTIERLYRDCRVYRIFEGT 403

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL---CKEDKGLARF 503
                  + + L +           L+ D+    K+ I  LR  ++     ++++G    
Sbjct: 404 NEINRTVITSTLVRRG---------LKGDI--PLKEAIEGLRARLASGIGPRQNEGELVQ 452

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547
             + + L S    + + G   +    +  +  D    T  M  G
Sbjct: 453 AAKDMLLLSLGVGIDKYGQGLLKHQEIVGKIADMAMLTFGMESG 496


>gi|238062513|ref|ZP_04607222.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884324|gb|EEP73152.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 398

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 128/390 (32%), Gaps = 36/390 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R +  + +P    +L      GL     D  F  +                  +  
Sbjct: 31  PHAQRLEHADEYPT--DILDGMREMGLFGLTIDEEFGGLGESLLTYALVVEELSRGWMSI 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A +++   +        P++ + E             V     ++E   G
Sbjct: 89  SGIVNTHFIVAYLISQHGSAEQKARLLPRMATGE-------------VRGAFSMSEPECG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRL 261
           +D++AI S+  +  D         W  +   S     L + +       G +  FL+ + 
Sbjct: 136 SDVSAIRSRAVRAGDNYVLDGQKMWLTNGAYSSVVATLVRTDTGAESVYGNMSTFLLEKE 195

Query: 262 LEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
              G    GL      +K+G +   T E+            L  +         ++    
Sbjct: 196 PGFGETAPGLTIPGRIDKMGYKGVETTEMVLDGVTVPASTVLGGAEQVGRGFYQMMDGIE 255

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++ A  +      +   A+ YA++R   G  L     +   +A++   I AA AL  
Sbjct: 256 VGRVNVAARACGISIRAFELAVAYAQQRRTFGQPLAKHQAIAFKLAEMGTKIEAAHALMV 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +    EA  A+++A        +    V+ EA    GG GY +E  I R  
Sbjct: 316 NAARLKDAGQRNDVEAGMAKLLA-------SEYCVEVVQEAFRIHGGYGYSKEYEIERLM 368

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           RE+P   I  G+       +   L +   L
Sbjct: 369 REAPFLLIGEGTSEIQKTIISRGLLRDYKL 398


>gi|254384299|ref|ZP_04999642.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343187|gb|EDX24153.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 409

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 131/395 (33%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++            Q          +E   
Sbjct: 85  IALSIVGTGLAAIGVVANGTEEQIGTWIPQMYG----------DQNDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+ A+ ++       D         W  +  +++  I++A V+  +G       +   
Sbjct: 135 GSDVGAMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHIVVAVVDPELGTKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------------------- 304
           + +GL   +   K G R++ T E+   +        L                       
Sbjct: 195 NTSGLSQGQKFKKHGIRASHTAEVVLEDCRIPGSCLLGGKEKLDERLARARERARAGGGE 254

Query: 305 -STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                              M+V   R +   A+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 255 RVKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMR 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +R +      K  +           ++K +  ++A  V A+A++ +GG+G
Sbjct: 315 TQIDAARLLVWRASWMTVAGKPFTSA------EGSMSKLFASEVAKKVTAQAVQILGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           Y  E  + R +R+S   +I  G+     L +   +
Sbjct: 369 YTREYPVERMHRDSAIYTIFEGTSEIQRLVIARTI 403


>gi|325000273|ref|ZP_08121385.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 371

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 129/362 (35%), Gaps = 25/362 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            L       GL       S              A     A    A   +  S  +A  + 
Sbjct: 31  QLWASLAKAGLLGLSIPESHGGSEGDALAVAIVAEELSRASAGIAITPLVSSYMAAPHLV 90

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +P     W  +I   E                 + +TE   G+D+A +TS+ ++  D
Sbjct: 91  RNGSPEQRDRWLSRISGGE-------------AVAAIAVTEPGAGSDVAGLTSKARRTDD 137

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        +  ++ ++D  I+ A+  G      +          GL +     K+G RS
Sbjct: 138 GWVIDGRKMFITNAGLADVLIVGAR-SGGPRHSGITLFEVPKDAPGLSFGSPLTKMGWRS 196

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+           ++G  N     + +   L  +  A M +      L     + R
Sbjct: 197 SDTREVVLDGVVVPHDAVVGAENRGFHQIMEGFQLERIALAGMGIGQAAECLDLVRAHVR 256

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L     ++  +A + +D+ AA  ++++ A   D           A +     
Sbjct: 257 EREAFGAPLTGLQTVRHRVATMEIDLDAARLVTYQAAARMDAGHPE------APVSVARA 310

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           KY     A  +I +A++  GG+G++EE  +ARHYR++    I  G+     L++L+   K
Sbjct: 311 KYLAAVAANRIIDDAVQLFGGAGFVEETPVARHYRDARILRIGGGTDEVQ-LEILSKSMK 369

Query: 461 GT 462
           G 
Sbjct: 370 GA 371


>gi|118472013|ref|YP_886562.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173300|gb|ABK74196.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 397

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 130/378 (34%), Gaps = 34/378 (8%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +  A++ +    GL   +    +  +                  +    +++
Sbjct: 34  QELEHSDTYPQAIVDQMKQMGLFGLMIPEEYGGLGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+    T    + + P++ + E                   ++E   G+D+AA
Sbjct: 94  THFIVAYMIRQHGTDEQKRKFLPRMATGE-------------TRGAFSMSEPELGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE--GRVGCFLVPRLLEDGSP--- 267
           I ++ +   DG Y + G K +L++  S   +  L + +         +   L +      
Sbjct: 141 IRTRARNNDDGTYTIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNLTAFLIEKPEGFG 200

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFS----NTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL      +K+G +   T EL F     +    L G        + D   +  ++ 
Sbjct: 201 EVLPGLTIPGKLDKLGYKGIDTTELIFDGYRADAADILGGTPGQGFFQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +  +      +   A+ YA++R   G  + +   +   +A++A  + AA  +    A   
Sbjct: 261 SARACGVGLRAFELAVRYAQQRETFGKPIAEHQAVAFQLAEMATKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +     A  A+ +A        +    V  +A    GG GY +E  I R  R++P  
Sbjct: 321 DSGERNDVAAGMAKYLA-------SEFCSEVTQQAFRIHGGYGYSKEYEIERLMRDAPFL 373

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+       +   L
Sbjct: 374 LIGEGTSEIQKNIISKRL 391


>gi|89099730|ref|ZP_01172603.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89085477|gb|EAR64605.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 588

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 153/419 (36%), Gaps = 50/419 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ------AHKIRAARLYLMAQLEAGHLMSPSVT 157
             LL+++   GL        +  +   +         I A+  Y +A      +      
Sbjct: 62  KELLKKAGDLGLLAHSIPEQYGGLGLDKITKGIVGENIGASSGYGVAHSNHTCI------ 115

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    T      + PK+ S EY                  LTE   G+D  +  + 
Sbjct: 116 ATLPITYFGTEEQKNKYLPKMASGEY-------------IGAYCLTEPNAGSDALSSQTV 162

Query: 218 GQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
            +    G  Y L+G K +  ++  SD FI+ A+V+G+         + +    GL     
Sbjct: 163 ARLNEAGTHYILNGTKLYITNAAFSDTFIVYAKVDGKD----FTAFILEKDFPGLVLGPE 218

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK--ILIYLDSAIMSVSGMRVSL 332
           +NK+G + ++T  +   +        L     G V  +    L   +     +   + SL
Sbjct: 219 ENKMGIKGSSTRSVILEDCEVPAENMLGEQGKGHVIALNVLNLGRFNLGSACMGAAKYSL 278

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA--------- 383
            +A  Y + R   G  + D    K  +  +A  I A+ ++ +R A   +EA         
Sbjct: 279 KKAAQYTQERRQFGRKIADFHATKEKVGKMAARIYASESMQYRTAGLLEEALGDVWDSPD 338

Query: 384 -KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +   +  +       + K +  +       E ++  GG+G+I+E  I + YR+S  N I
Sbjct: 339 SRLAGKRMSEYASECAVCKVFGSETLDYAADETLQLYGGAGFIKEYGIEQIYRDSRINRI 398

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG------SSGKKVITILRDSISLCK 495
             G+     L +   L K     E  F  L ++        +S   V+ + R+++SL +
Sbjct: 399 FEGTNEINRLLIPAGLFKKAAKGEVDFRELTEEAASAILQPASLNGVLAMEREAVSLMR 457


>gi|298710746|emb|CBJ32167.1| acyl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 474

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 130/359 (36%), Gaps = 33/359 (9%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
              GL        F           I    +  +    A  +   +   ++M+    +  
Sbjct: 136 FEHGLMGIEAPEEFGGSGLNFMSACIVVEEVAKVDPAVAVLVDIQNTLISNMLRFWGSRE 195

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY--C 227
           + + + PK+ S                     L+E   G+D  ++ ++     DG Y   
Sbjct: 196 LQEKYFPKLCSG--------------SVSSFCLSEVGSGSDAFSLATKATLSPDGSYYTI 241

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  ++  ++ F + A V+   G   +   + +    G+     ++K+G R+++T 
Sbjct: 242 EGEKLWISNAEQAELFFVFANVDPSKGYKGITCFIVEKGFGGVTVGPKEDKLGIRASSTC 301

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-----HYARR 341
            + FS          NV     +  +  I  L+   + +      LA+        Y   
Sbjct: 302 PVTFSGCEVPAT---NVLGEVGQGYRYAIEILNEGRIGIGAQMAGLADGCLSATVPYLFE 358

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   GG + D   M+  +A  A ++ AA+AL    A   +  +   +EAA        +K
Sbjct: 359 RKQFGGFVGDFQGMQHQVAQAATEVEAASALYRSAARMKEAGQPFVKEAAM-------SK 411

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  ++A    ++ +E +GG G+ +     + YR+    +I  G+ N  +  +  +L K
Sbjct: 412 LYTSQVAERTASKCVEWLGGVGFTKAFLAEKFYRDCKIGAIYEGTSNIQLSTIAKILRK 470


>gi|325676122|ref|ZP_08155803.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553032|gb|EGD22713.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 397

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 134/380 (35%), Gaps = 34/380 (8%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   ++ R    GL   +    +  +                  +    +++
Sbjct: 34  QELEHSDTYPQEIVDRMREMGLFGLMIPAEYGGLGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+A   T    +D+ P++ + E                   ++E   G+D+AA
Sbjct: 94  THFIVAYMIARHGTEAQKQDYLPRMATGE-------------TRGAFSMSEPELGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE-------GRVGCFLVPRLLEDG 265
           I ++ ++  DG Y + G K +L++  S   +  L + +         +  FLV +    G
Sbjct: 141 IRTRARRGDDGDYTIDGQKMWLTNGGSSTLVAALVRTDEGAERRHDNLTTFLVEKPAGFG 200

Query: 266 S-PNGLCYQRLKNKIGNRSNATVELEFS----NTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           +   GL      +K+G +   T EL F     +    L G        + D   +  ++ 
Sbjct: 201 TVAPGLTVPGKIDKMGYKGIDTTELVFDGYRADADAILGGAPGQGFRQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +      +   A  YA++R   G  +     +   +A++A  + AA  +    A   
Sbjct: 261 AARACGVAIRAFELAARYAQQRSTFGKPIAQHQAISFQLAEMATKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D        A  A+ +A        +    V  ++    GG GY +E  I R  RE+P  
Sbjct: 321 DSGDRNDVAAGMAKYLA-------SEYCAEVTQQSFRIHGGYGYSKEYEIERLMREAPFL 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   + +
Sbjct: 374 LIGEGTSEIQKTIISKGILR 393


>gi|163858095|ref|YP_001632393.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261823|emb|CAP44125.1| probable acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 605

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/460 (17%), Positives = 160/460 (34%), Gaps = 58/460 (12%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIH 112
            +     E ++     E AR        L+A       +W+   V   P + A   + + 
Sbjct: 27  PDFNEADEELIDAVLDENARFVEEVLAPLNAIGDRTPAKWNDGSVRTSPGFRAAYAKFVE 86

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRV 170
                                 + AA    +        + P +T   + AL  +     
Sbjct: 87  GSWQSLPHAPDDGGQGLP--RLLSAAVNESLHASNMSFALCPMLTDGVIDALSRVAGAEQ 144

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P +    +                + LTE + G+D++ I ++     DG Y L G
Sbjct: 145 RALYLPHLLEGRW-------------TGAMNLTESQAGSDLSQIATRAVPQDDGSYRLFG 191

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+V+G       +  F+VP+ L       G  N +    
Sbjct: 192 QKIFITYGEHDFAENIVHLVLARVQGAAAGISGLSLFVVPKYLVAQDGTLGPRNDVWCAS 251

Query: 275 LKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           L++K+G   + T  L F +          G L+G+       +  +         +  V+
Sbjct: 252 LEHKLGIHGSPTAMLLFGDGKGEVGQGAVGHLIGEAGHGLANMFIVMNSARFSVGLQGVA 311

Query: 327 GMRVSLAEAIHYARRRHVSG------GILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +   A+ YA+ R            +   P ++R +  +     +  AL++  A   
Sbjct: 312 ISDRAFQLALGYAKERLQGKGRSGGSQPIAHHPDVQRMLMTMKSLTESMRALAYATAAHQ 371

Query: 381 D------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D      +A  R+   A+   + P+ K +C + +  V +  ++  GG G+IEE   A++Y
Sbjct: 372 DLSVHHPDADMRARHEAFFEFLIPVLKGYCTETSLEVTSLGIQVHGGMGFIEESGAAQYY 431

Query: 435 RESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL 472
           R++    I  G+       L    +L     +  +L   +
Sbjct: 432 RDARILPIYEGTTAIQANDLVGRKVLRHAAFVVHELLRQM 471


>gi|119474784|ref|ZP_01615137.1| putative acyl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2143]
 gi|119450987|gb|EAW32220.1| putative acyl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2143]
          Length = 614

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/471 (17%), Positives = 158/471 (33%), Gaps = 70/471 (14%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +++   G +      +F             A +   +          S+
Sbjct: 72  VRTPEGFKDAFQQAAAGGWNSLSIPEAFGGAGLPDILSSCIAEMGNSSNQSLAMYGGLSM 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +  +          PK+ + E+  T             + LTE   GTD+  + +
Sbjct: 132 AALWSLMALGNDFQKSVIVPKLVAGEWTGT-------------MNLTEPHCGTDLKLMKT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC----------FLVPRL 261
           +     DG Y ++G K F+S    D       +++A+V    G           F+VP+ 
Sbjct: 179 KAVAQDDGTYRITGTKIFISGGDHDLTDNIIHMVIAKVPDDHGKLNDSLGAVNFFMVPKF 238

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL----------GDLNV-- 304
           L +     G  NG+    ++ K+G + NAT  L + N   + +          G      
Sbjct: 239 LINEDGSIGEANGVSTGSIEKKMGIKGNATCVLNYDNAIAYKVPESQPKAASAGGEKKSS 298

Query: 305 --STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------IL 349
                 +  M     +   +   +   V+   A  YA  R   G               +
Sbjct: 299 VSGMAGMFLMMNGARMGVGMQGYAQSEVAYQNAALYANDRLQ-GRSLSGAKNPDGAADPI 357

Query: 350 IDQPVMKRAIADIALDIAAATALSFRL------ANSFDEAKSRSEEAAYARIMAPITKYW 403
           I  P ++R +         A AL   L      A+     + +      + ++ P+ K +
Sbjct: 358 IVFPDVRRMLMMSRAFTEGARALHMWLSFLGTSASKSTNPEEQMASGEISNLLTPVIKGY 417

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
              M       AM+C GG G+I E  + +  R+S  N I  G+     LD+L   +   G
Sbjct: 418 LTDMGFHCTNAAMQCFGGHGFIREHGMEQFVRDSRINQIYEGANGVQALDLLGRKVFANG 477

Query: 462 TNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
                  F+ +++++ G+ G   +  +  S+     D   A     + AL 
Sbjct: 478 MQGTNAFFNMIDEEISGAVGVDRLDGMAQSLGRGISDLKAATHWVAENALV 528


>gi|238579210|ref|XP_002388976.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553]
 gi|215450767|gb|EEB89906.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553]
          Length = 548

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 123/472 (26%), Positives = 204/472 (43%), Gaps = 47/472 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++L        PQL  Y   G R D++     W  L   +  +G+    ++R ++  
Sbjct: 9   QVIRQLGSPHRVTPPQLVQYDQWGRRIDELRTSDGWKNLKATAQKEGIPAIFYERKYQEH 68

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            R   +    A + +    EA   +S +  +A ++ L+ TP + K   P++ +R+     
Sbjct: 69  SR--VYGFVKAFMMVGDCHEAFCPISMTDGAARVLELLGTPGMKKHVFPRLIARDPTH-- 124

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDA 242
                  +   G  +TE+ GG+D++ I +  Q +         Y L G KWF S+  SD 
Sbjct: 125 -------AFVSGQWMTERPGGSDVSQIETTAQHMGKTHRLGPHYLLHGFKWFSSATDSDI 177

Query: 243 FIMLAQV----EGRVGC--FLVPRLLE------DGSP----NGLCYQRLKNKIGNRSNAT 286
            + LA+     EG  G   FLVP          D +P    NG+   RLKNKIG  +  T
Sbjct: 178 SVALARTGTLQEGSRGLSLFLVPLRRPLLRDPTDPTPSPISNGIRVHRLKNKIGTHTLPT 237

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            EL    T G+L+G        +  +  +  + SAI S   +R  LA A  Y+  R ++G
Sbjct: 238 AELSLEYTEGYLIGKPGQGVRSITPLLNITRVWSAIASTGALRRCLAIATAYSDVRAING 297

Query: 347 GI--LIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITK 401
           G   L D P+    +A I+L   A T L+F   RL    +   +  +E    R++ P+ K
Sbjct: 298 GKTFLRDTPIHVAQLAKISLVYRALTHLTFGVIRLVGKTECNVADEQEKLQLRLLTPLVK 357

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +  + A   + EAM  +GG+GY+EE  I R  R++    I  G+   + LD++    + 
Sbjct: 358 AFAAEKAVTAMEEAMTALGGAGYMEENDIGRMIRDALVEKIWEGTTTVLALDLVRA-GRD 416

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
               + L            + VI+   D+ S     + L+  L +++ALA  
Sbjct: 417 PATLKALIEW--------ARNVISSCPDTFSDSSAVQALSSSL-DQLALAYQ 459


>gi|291297408|ref|YP_003508806.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290472367|gb|ADD29786.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 534

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 120/516 (23%), Positives = 211/516 (40%), Gaps = 49/516 (9%)

Query: 33  GMNAYSSDSLLVALIANFPSVV---HKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N ++ +  L +L+  +         ELE  G        +    +     P L  +  
Sbjct: 9   GKNHWALEPDLPSLLNRYWKGWTAHQSELERFGALAGGVAYRIADHVDKEARPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G+R D+V   PA  AL R      ++ + +        +  +  +  A  YL+A     
Sbjct: 69  NGQRIDRVRLSPAQEALNRELAA--MNRAPY--------QGGSWHLHFALGYLLADPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   ++T+A++ A+         W  ++ +                     +TE +GG+
Sbjct: 119 CI--QTITNATLYAIHKYAPQFARWKEELLAG-------------RAFGATWMTEVQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A   +       ++ L G K+F S   ++D  I+ A+ EG       +  FLVPRL 
Sbjct: 164 DLGANQVRAVPEG-AVWRLWGDKYFSSGAGLTDYAIVSARPEGAPAGPKGIALFLVPRLD 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N    +RLK+K+  R+  + E+EF+     L+G        + +   L  L +A 
Sbjct: 223 SQGQLN-YRVRRLKDKLATRAVPSGEVEFAGAEAHLIGRAEEGIYYILETLTLSRLANAA 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +  EA+   + R   G  L + P+++R + D+A+ IA   AL+FR   ++DE
Sbjct: 282 GAMGLARKAQLEALFRVQARRAFGKKLEEHPLIRRDLTDLAVRIAGGLALTFRAVAAWDE 341

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       S    YAR++A + K    +         ME  GG G++E+ +IAR  RE+ 
Sbjct: 342 AWQETPPYSPRYHYARLLAHLAKARTAEHGTYCTQLGMELFGGVGFVEDFAIARLAREAL 401

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVITILRDSISLC- 494
              I  G  N   LD L +L +         +  + LE       +  +  LR ++    
Sbjct: 402 ITPIWEGPANVQALDTLEVLFRKGAAEPFLAEFGAKLEAIQSEEARLALARLRHTLDYLQ 461

Query: 495 ----KEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
               +E +  A+     +A A++ A LY  G    A
Sbjct: 462 TLSPEEAQWHAKEALRTLADAATVALLYELGSERHA 497


>gi|73955394|ref|XP_857195.1| PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain
           specific, mitochondrial precursor (VLCAD) isoform 6
           [Canis familiaris]
          Length = 487

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/307 (19%), Positives = 129/307 (42%), Gaps = 35/307 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I S     
Sbjct: 184 ILLFGTKAQKEKYLPKLASGE-------------SIAAFCLTEPSSGSDAASIRSSAVPS 230

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 231 PCGKYYTLNGSKIWISNGGLADVFTVFAKTPVTDAATGAVKEKITAFVVERSFGGVTHGP 290

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F +         NV        K+ ++ L++    ++       
Sbjct: 291 PEKKMGIKASNTAEVYFDSVRVPA---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 347

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 348 RGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 405

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 406 ----FQIEAAISKIFGSEAAWKVTDECIQILGGMGFMKEPGVERVLRDLRIFRIFEGTND 461

Query: 449 AMVLDVL 455
            + L V 
Sbjct: 462 ILRLFVA 468


>gi|294339993|emb|CAZ88356.1| acyl-CoA dehydrogenase [Thiomonas sp. 3As]
          Length = 594

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/488 (19%), Positives = 186/488 (38%), Gaps = 65/488 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P      LE  G++        L R  + +           +   KV   P +    R+ 
Sbjct: 34  PDTAAAVLEECGKF-NRDVIAPLNREGDLHP------SAWAD--GKVTTTPGFKQAFRQF 84

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TP 168
           +  G         F      ++  I AA   ++        + P ++  ++ AL+T  T 
Sbjct: 85  VDGGWQGLQHSAEFGGQGLPKS--ISAACTEMLNSANLSFALCPLLSDGAIEALLTAGTD 142

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P++ S E+  T             + LTE + G+D+A + S+ +   DG Y L
Sbjct: 143 AQKQRYIPRLISGEWTGT-------------MNLTEPQAGSDLALVRSRAEPQGDGTYRL 189

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            G K +++    D       ++LA++         +  F+V ++LEDG  N +    +++
Sbjct: 190 FGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKGISLFIVLKVLEDGRRNDVWCASIEH 249

Query: 278 KIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           K+G +++ T  L + +          G L+G+ N     +  M         +  ++   
Sbjct: 250 KLGIKASPTAVLIYGDGKGEVGTGAIGELVGEANRGLEYMFIMMNAARYAVGLQGIAVAE 309

Query: 330 VSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            +  +A  YA+ R  S            ++  P ++R +  +        AL+   A+  
Sbjct: 310 RAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPDVRRMLMTMRALTEGCRALALVAASLH 369

Query: 381 DEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D  ++  +    A   A      P+ K +  +M+  V +  ++  GG G+IEE   A++Y
Sbjct: 370 DVGRAHPDAGQRAAHEAAYEFLVPLVKGYSTEMSIEVASLGVQVHGGMGFIEETGAAQYY 429

Query: 435 RESPANSILLGSGNAMV--LDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVITILRD 489
           R++   +I  G+       L     +  G  L   F    S +E+ L ++G      +  
Sbjct: 430 RDARILTIYEGTTAIQANDLVGRKTVRDGGALALHFAARVSKVEEALTATGDAQAVAMAG 489

Query: 490 SISLCKED 497
            +   +E 
Sbjct: 490 QLRQAREA 497


>gi|119502971|ref|ZP_01625056.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119461317|gb|EAW42407.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 388

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 138/371 (37%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+    P    L  ++   GL    +   +             A        E 
Sbjct: 36  PYADDWDEAGEIPIG--LWPKAAEVGLLGLSYPEVYGGTPGDVWLGQITAE-------EL 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G + +  + ++ MV  +  P +   W  +    E  P    P+ +    I LG+TE  GG
Sbjct: 87  GRVGAGGINASLMVHNIGLPPIIN-WGSQTMKDEIAP----PILRGEAWISLGITEPGGG 141

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +   +  D  Y ++G K +++  M   ++  A   G  G   V  LL      
Sbjct: 142 SDVANLQTTAVRDGDD-YVVNGSKTYITGGMRANWVSTAVRTGGEGAGGVSMLLIPTDAE 200

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     L  K G  ++ T  L F N       L+G+ N     +        +  AI   
Sbjct: 201 GFSRTPLNRKQGWWASDTATLYFDNVRVPATQLIGEENQGFRVIMTNFNSERMGMAIHME 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  RV + EA+ +AR R   G  L D  V++  IA +   I A  A       S +  + 
Sbjct: 261 AAARVCMEEAVSWARERKTFGKRLGDHQVIRHKIAMMKQKINATQAYIRVCNESIERGEP 320

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              + A  ++ A     +C         EAM+ +GG G++      R YRE   N+I  G
Sbjct: 321 NPADIALLKVQASEVMEFC-------AREAMQVLGGLGFMRGSRTERIYREVRVNAIGGG 373

Query: 446 SGNAMVLDVLN 456
           S   M      
Sbjct: 374 SEEIMRDLASR 384


>gi|268562623|ref|XP_002646709.1| Hypothetical protein CBG13088 [Caenorhabditis briggsae]
          Length = 613

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/466 (16%), Positives = 165/466 (35%), Gaps = 57/466 (12%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MV 162
            A+L +    G    +     E      +   R A +     L  G +M    +     +
Sbjct: 100 RAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGI 159

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    + + P + +                     LTE   G+D +++ ++ +  +
Sbjct: 160 LLEGTDAQKQKYLPDLATG-------------RKFAAFALTEPSTGSDASSVRTRAELSA 206

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
           DG       G  W  +   +D F + AQ      +G     +    + + +  G+     
Sbjct: 207 DGKHYVLNGGKIWISNGGFADVFTVFAQTPIKQADGSTKDKM-SAFIVERAFGGVTSGPQ 265

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV-----SGMR 329
           + K+G + + T E+ F N    +    N+     E  K+ +  L++    +       M+
Sbjct: 266 EKKMGIKGSNTTEVHFDNVKIPV---ENLLGKEGEGFKVAMNILNNGRFGIPAACTGAMK 322

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSE 388
             + + + +   R   G  L +   ++  + ++   + A  ++ + L+++ D   K    
Sbjct: 323 HCIQKTVDHITTRVQFGKKLEEFGNVQEKLVEMISKLYATESIVYMLSSNMDRGIKEYQL 382

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA  +++A        + A  V  +A++  GG G++ E  + R  R+     I  G+ +
Sbjct: 383 EAAIGKVLA-------SESAWLVCDDAIQVHGGMGFMRETGLERVLRDLRIFRIFEGAND 435

Query: 449 AMVLDVL--NLLEKGTNLFEQL--------FSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            + L +        G +L +Q          +      G++G     ++  S+       
Sbjct: 436 VLRLFIALTGAQHAGKHLAQQASGVGGMISLAVSRVTGGNTGSNFGQVVDSSLQDS---- 491

Query: 499 GLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTH 542
             A+ L ++IAL        L +     I   +  +R  +     +
Sbjct: 492 --AKALDQQIALFGQTVQGLLMKHKKGIIDRQYEMHRVANAAIDIY 535


>gi|126513532|gb|ABO15870.1| acyl-CoA dehydrogenase [Streptomyces vitaminophilus]
          Length = 383

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 141/379 (37%), Gaps = 33/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   +W+++   P      RR    GL        F         +  A      A+   
Sbjct: 27  PQYAQWEQLGHPP--REFYRRMGALGLLGIAVPEEFGG-GGASGLRFSAVLSEETARHGV 83

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               S   +   +  L    TP   + W P   S               +   + +TE  
Sbjct: 84  TLGASRVHSDLVLPYLLEYATPEQKQRWLPGFASG-------------DLMTAIAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR---VGCFLVPRLL 262
            G+D+A IT+  ++  D +Y L+G K F++   ++D  +++ +   R        +  L+
Sbjct: 131 TGSDLAGITTTARRDGD-VYVLNGSKTFITGGALADLVLVVCRTAPRQDGDRRAGLSILV 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            + +  G    R   KIG R+  T EL F         LLG+   + G +    +   L 
Sbjct: 190 VEATSPGFSVGRKLEKIGLRTQDTAELFFDEVRVPAANLLGEEGEAFGYLSHNLVQERLA 249

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I +V+    ++   + Y R+R V G  L      K  +A+ A ++ A   L  R    
Sbjct: 250 IVIGAVTAAAAAVEMTVEYVRQREVFGKPLSSFQNTKFVLAECAAEVEAGQVLMDRAIEE 309

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +    + A A       K +C +M   VI + ++  GG GY+ E  IAR Y ++  
Sbjct: 310 HERGELSHADVAKA-------KLFCTEMEGRVIDKCLQLHGGYGYMLEYPIARLYADARV 362

Query: 440 NSILLGSGNAMVLDVLNLL 458
           + +  G+       V   L
Sbjct: 363 HRVYGGTSEVQKSIVGKSL 381


>gi|104779425|ref|YP_605923.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95108412|emb|CAK13106.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 393

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|297180173|gb|ADI16395.1| acyl-CoA dehydrogenases [uncultured bacterium HF130_12L15]
          Length = 596

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 92/533 (17%), Positives = 191/533 (35%), Gaps = 67/533 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +        A + + N P+            KVE   A  A L      G   + +D 
Sbjct: 44  ERIAIEHFLPHAALLDRNEPKFVD--------GKVEMDSAVGAALAVYREAGFFGAGFDH 95

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +      ++ ++  A ++  A +        ++ +A+++A   T    + +        
Sbjct: 96  EWGGAQMPESVRVATAFMFSAANVSTSGYPFLTIGAANLIATFGTDEQKERFL------- 148

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
                  PM +      + L+E + G+ ++ IT++ +   DG Y L G K ++S    + 
Sbjct: 149 ------RPMVEGRFFGTMCLSEPQAGSSLSDITTRAEPAGDGTYRLIGRKMWISGGDQEI 202

Query: 242 ----AFIMLAQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++ G   G   +   +            G  NG+    L +K+G R    
Sbjct: 203 SENIVHLVLAKIPGGPAGVKGISLFIVPKHEVLEGGGIGERNGVTLAGLNHKMGYRGTTN 262

Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L         G+LLG+ +     +  M     +   + + +        ++ YAR R 
Sbjct: 263 TLLHLGEDSPCVGYLLGEPHKGLSYMFQMMNEARIGVGLGATALGAAGYQASLAYARERP 322

Query: 344 VSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
                           +I+   ++R +      +  + AL    A+  D  +  ++E A 
Sbjct: 323 QGRQPDGKDPSSAQVPIIEHADIRRLLLAQKAAVEGSLALGLYCADLVDTLRVETDETAR 382

Query: 392 -----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   ++ P+ K W  +        A++ +GG GY  +  + R YR++  N I  G+
Sbjct: 383 RENELLLDLLTPVAKSWPSEFCLEANKHAIQILGGYGYTRDFPLERIYRDNRLNPIHEGT 442

Query: 447 GNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISL-CKEDKGLAR 502
                LD+L     +      + L   +  D+  + G +V+++  ++++    E     R
Sbjct: 443 HGIQGLDLLGRKVGQANGAGVKALAGRIMADVSQAHGFEVLSLHAEALANHLAETVATTR 502

Query: 503 FLT------EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
            L        ++ LA++   L   G   IA ++L    + +           F
Sbjct: 503 KLAVAASENPRLGLANATIYLDMFGHVVIAWMWLRQALVASRKLEAGAADTAF 555


>gi|145224949|ref|YP_001135627.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315445280|ref|YP_004078159.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217435|gb|ABP46839.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315263583|gb|ADU00325.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 404

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 133/369 (36%), Gaps = 30/369 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +    A  +  A       L       + +  +  ++ 
Sbjct: 54  DLREQTKSMGLFGYAIPQEWGGLGLNLAQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W  +I S E             +     LTE   G++ + + ++  +  D
Sbjct: 114 GYGTDEQKKTWLERIASGE-------------IVASFALTEPGAGSNPSGLRTKAVRDGD 160

Query: 224 G---IYCLSGHKWFLSS-PMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G    + L+G K F+++ P +D F+  A+          +   L      G+       K
Sbjct: 161 GPHSGWILNGQKRFITNAPNADLFVTFARSRPADDKGAGIAVFLVPADTPGVDIGAKDKK 220

Query: 279 IGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +G     T ++ F++        + G  ++             +  A ++V   + +L E
Sbjct: 221 MGQEGAWTADVNFTDVEVPDTALVGGSEDLGYRAAMTSLARGRVHIAALAVGAAQRALDE 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YA      G  + D  +++  +AD    + A  AL    A  +   + R       R
Sbjct: 281 SVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRALVRDAARLWVTGQDR-------R 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I     K +C +MA  V   A++  GGSGY+ E  + R YR+     +  G+     L +
Sbjct: 334 IAPSAAKLFCTEMAGKVADLAVQIHGGSGYMREVPVERIYRDVRLLRLYEGTSEIQKLII 393

Query: 455 LNLLEKGTN 463
              L KG  
Sbjct: 394 GGGLVKGAK 402


>gi|256380219|ref|YP_003103879.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255924522|gb|ACU40033.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 383

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/403 (19%), Positives = 140/403 (34%), Gaps = 40/403 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
             L  T Q  AR      P +  +      +++ EF    + ++ +    GL        
Sbjct: 11  EALRATVQRFAR--EEVAPVIGGF------YEREEFP---YDIVAKMGRMGLFGLPVPEE 59

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSRE 182
              +         A              +   V+ A M  L   T      W P      
Sbjct: 60  HGGMGGDYFALCLALEELGRVDSSVAITLEAGVSLAVMPLLRFGTDEQKARWLPA----- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                   +         GLTE  GG+D  A+ +   ++ DG + L+G K F+++  +  
Sbjct: 115 --------LAAGEALGAFGLTEPGGGSDAGALRTTA-RLEDGQWVLNGTKAFITNSGTSI 165

Query: 243 --FIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
              + +A V GR   G   +  ++      GL      +K+G  ++ T EL F +     
Sbjct: 166 TSLVTVAAVTGRKPDGRPEISTIIVPAGTPGLAVGSKYSKVGWNASDTHELSFQDCRVPE 225

Query: 299 LGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G  + ++ L    +  A + V   +  + E + YA+ R   G  +     +
Sbjct: 226 ANLLGERGRGYAQFLRTLDEGRVAIAALGVGLAQGCVDECVRYAKEREAFGSPIGRYQAI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IAD+ + +  A    ++ A+     +    EAA       I K    + A     E 
Sbjct: 286 QFKIADMEVRVHTARLAYYQAASKMLRGEPFKREAA-------IAKLVSSEAAMDNAREG 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG G++ E  + R YR++    I  G+     + +   L
Sbjct: 339 AQVFGGYGFMNEYPVGRFYRDAKILEIGEGTSEVQRMLIAREL 381


>gi|118463344|ref|YP_884186.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118164631|gb|ABK65528.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 387

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 137/369 (37%), Gaps = 33/369 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++       +          +   +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAVPEEYGGSPVGTRCYVLVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++++  T    + + P + + E   T             + LTE  GG+D+  + +  
Sbjct: 94  AKLLSMFGTEEQKQKYLPAMATGELRAT-------------MALTEPGGGSDLQNMITTA 140

Query: 219 QKISDGI--YCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQ 273
               +G     ++G K ++S+      I +L + + +       +  LL +  P GL   
Sbjct: 141 LPAGNGESELVINGAKTWISNARRSGLIALLCKTDPKARPQHSGISILLVEHGP-GLTVS 199

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMR 329
           R   K+G +   + EL F          L      G  + MK L    +  A  ++    
Sbjct: 200 RDLPKLGYKGVESCELSFDGCRVPASAVLGGEPGRGFAQMMKGLETGRIQVASRALGVAT 259

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A+ +D  +    E
Sbjct: 260 AALEDALAYAQQRESFGKPIWKHQSISNYLADMATKLTAARQLTLHAADRYDAGERADME 319

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+   
Sbjct: 320 AGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEI 372

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 373 QRNVITGQL 381


>gi|260222964|emb|CBA33057.1| hypothetical protein Csp_B17130 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 824

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 153/374 (40%), Gaps = 51/374 (13%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    ++    G         F      +   I AA   ++        + P ++  
Sbjct: 74  TPGFKDAFKQFTDGGWQGLQHPTDFGGQGLPK--TIGAACGEMVNSANMSFALCPLLSDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  +  +   +   + S ++  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGSDELKATYLENLVSGKWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS 266
            +   DG Y + G K F++    D       ++LA+V G       +  F+VP+ + +  
Sbjct: 179 AEPQPDGTYKVFGTKIFITWGEHDMAENIVHLVLARVSGAPEGVKGISLFVVPKFMVNKD 238

Query: 267 -----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
                 N +    +++K+G +++ T  L++ +     G+L+G  N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGQENRGLEYMFIMMNAARY 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSG---------GILIDQPVMKRAIADIALDIAAA 369
              +  ++    +  +A+ +++ R  S            +I  P ++R +  +       
Sbjct: 299 GVGVQGIAIAERAYQKAVQFSKDRVQSRPVDGSTPGSAPIIHHPDVRRMLMTMRAYTEGC 358

Query: 370 TALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            AL+      +  A+   +A++R +  A+   M P+ K +  +M+  V +  ++  GG G
Sbjct: 359 RALASVAASAYDAAHHHTDAEARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMG 418

Query: 424 YIEERSIARHYRES 437
           +IEE   A++YR++
Sbjct: 419 FIEETGAAQYYRDA 432


>gi|225677980|gb|EEH16264.1| hypothetical protein PABG_06351 [Paracoccidioides brasiliensis
           Pb03]
          Length = 618

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 124/544 (22%), Positives = 211/544 (38%), Gaps = 81/544 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q P  I    Y  D+ L  +I+       PS++ K+L      VLS +  
Sbjct: 2   EPSSATKGFFQTPPTIPP-QYVEDAALRRIISLHLPSPTPSIIDKDLSRFSRLVLSRSHL 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G   + D +     W  L    I +G     +D +      
Sbjct: 61  AHVADAERNQPYLRPLTTFGVENKQDPLVTSEGWRKLQDIGIEEGFVALGYDDAPGNPAS 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS--------- 180
              +++         Q    H+ + S       AL+T P    D A K+           
Sbjct: 121 HWNNRVY--------QSIKQHIWTSS------AALVTCPGAMTDGAAKLLGAHLNDKDGD 166

Query: 181 --REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
             RE      +   + +   G  +TE++GG+D+    + G+K+S                
Sbjct: 167 IFREARNRLISRDPRFAWTSGQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNP 226

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P R    G        NG+  Q
Sbjct: 227 LGPWQLDGFKWFSSATDANMTIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQ 286

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +    + I +V G   +LA
Sbjct: 287 RLKNKLGTKTLPTAELELKGMRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALA 346

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--------- 384
            +  YAR R   G +L D P   RA+A   +   A   L+F +A+    ++         
Sbjct: 347 ISRAYARVRVSGGRLLTDIPAHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLA 406

Query: 385 --------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
                      + +A  R++ P+ K      A   +   ME +GG GY+E      ++AR
Sbjct: 407 TRASILPTDAQQASALLRLLTPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVAR 466

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R++   SI  G+ + M  D++ +++  KG  +   +   +   L  + K       + 
Sbjct: 467 IFRDTCVVSIWEGTTDIMADDLVRVIKSRKGPEILTDVGQWVASALAIANKHSFQKEGEK 526

Query: 491 ISLC 494
           +   
Sbjct: 527 LQKA 530


>gi|295098335|emb|CBK87425.1| Acyl-CoA dehydrogenases [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 254

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 97/256 (37%), Positives = 138/256 (53%), Gaps = 8/256 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73
           +H    +    NQP      N + SD  L   +A   +    +L   +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPAPLSNSNLFLSDCALRDAVAREGAEWDVDLLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       RK + 
Sbjct: 59  GRLANVNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARKGSF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++T A+   L+ + P+   DW   + S  YDP      Q
Sbjct: 115 VARAARFVLHAQVEAGTLCPVTMTFAATPLLLQSLPKPFHDWLTPLMSDRYDPHLAPGAQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234

Query: 253 VGCFLVPRLLEDGSPN 268
           + CF VPR L DG  N
Sbjct: 235 LSCFFVPRFLPDGQRN 250


>gi|85858226|ref|YP_460428.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85721317|gb|ABC76260.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
          Length = 381

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 134/401 (33%), Gaps = 53/401 (13%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP----- 126
           E AR A  N   L    P             +    RR    G+      +++       
Sbjct: 18  EFARRALKNEA-LEHGDPR----------EFYWEGWRRCAEFGIQGIAMPKAYGGLELDL 66

Query: 127 -----VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +++   +  R A L      +      P       +    T    + +  ++ S 
Sbjct: 67  LTCVLIMQGLGYACRDAGLIFSLNTQIWTCECP-------ILKFGTDEQKEKYLGRLISG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMS 240
                        S+  G  +TE   G+D  ++ ++  +  D  Y L+G K F+++ P++
Sbjct: 120 -------------SIVGGHAMTEPDSGSDAFSMKTRAVRDGD-RYILNGTKIFITNAPIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  ++ A    +     V   + +    G    +  + +G RS    E+   +       
Sbjct: 166 DILLVFAVTNEQKKFGGVSAFIVEKGFPGFSVGKPFSLMGLRSCPIGEVILQDCEVPAEN 225

Query: 301 DLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L             +  + + +    +  M   L + + YA+ R   G  + D   +  
Sbjct: 226 RLGSEGAGSAIFNSEMEQERSCLFASQLGAMEKILEDCVQYAKARSQFGQPIGDYQAVSH 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+ + I  +  + +++A      K    E+        I K +  +       +A++
Sbjct: 286 KIADMRVRIELSRLILYQVAWMKASGKRAPVES-------SIAKLYVSESYVQTCMDALQ 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             G  GY  E  I R+ R+S A  I  GS       + + L
Sbjct: 339 IHGAYGYSTEFPIERNLRDSIAGKIYSGSSEIQRNILASFL 379


>gi|311692947|gb|ADP95820.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 374

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 133/370 (35%), Gaps = 27/370 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E W+K    P    + R++   GL CS     +        H              A   
Sbjct: 29  EEWEKSGIVP--KEIWRKAGEMGLLCSTVPEEYGGAGGDFGHSAVMIEELARVNATAIGF 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S   A  +    T    + W P++ S E             +   + ++E   G+D+
Sbjct: 87  TTHSEIVAPYIVAYGTEEQKQKWLPRMVSGE-------------IIGVIAMSEPGIGSDL 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ +Q ++  D  Y +SG K F+++  +   ++ A  +       +  +  +   +G  
Sbjct: 134 RSMRTQLRRDGD-QYIISGQKTFITNGGNADLVVTA-TKVDPASKDLTLVCVETDRDGFA 191

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             RL +KIG +   T EL F +    +   LG+ N   G +        L  AI +   +
Sbjct: 192 KGRLLDKIGLKGQDTAELFFDDVRVPVSNRLGEENEGFGYLTHQLAWERLIIAIRAAESI 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L   I Y + R V G  + D    +  +A+I                        ++
Sbjct: 252 DSFLDMTIGYTKERKVFGKTVFDFQNTRFKLAEIKAQATMLRVFVDNCLERVMNNDLPAD 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            AA A++M         ++   ++ E ++  GG G++ E  I + + ++    I  G+  
Sbjct: 312 VAAMAKLM-------GSELQGKLLDEMLQLHGGYGFMSEYRIGQAWIDARVARIYGGTSE 364

Query: 449 AMVLDVLNLL 458
            M   +   L
Sbjct: 365 IMKEIISRKL 374


>gi|313679641|ref|YP_004057380.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977]
 gi|313152356|gb|ADR36207.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977]
          Length = 373

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 122/362 (33%), Gaps = 30/362 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           W  L R+    GL       ++                   A      + S +      +
Sbjct: 38  WPQL-RKMGELGLLGMNTPEAWGGTGLDAVTWALVMEEIAAADPSVAVIFSVTSGLPQYM 96

Query: 163 AL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
            L   T    + +               P+ +        LTE   G+D   + S  +++
Sbjct: 97  LLKFGTDEQKEKYL-------------RPLAEGRWIGAFALTEASAGSDPKGLKSTAERV 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        W  S   +  ++++A+    +  FLVP         GL +   + K+G 
Sbjct: 144 DGGYRLSGVKSWITSGGQAQLYVIMARAPEGITAFLVPA-----GAEGLSFGEPEEKMGL 198

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            +  T E+     F      LG+                L  A  +V   R +   A  Y
Sbjct: 199 HAAHTTEVRMDGVFVPDEDRLGEEGKGLHYALAGLDSGRLGIAAQAVGIARAAFEIARDY 258

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +   +   +A++A  I A+  L    A         + EA+ A++MA 
Sbjct: 259 ADEREQFGRRIREFQGVSFKLAEMATAIEASRLLVLNGAMKKQAGARFTREASMAKLMA- 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  + A  V  EA++ +GG+GY  +  + R+YR++    I  G+     + +   L
Sbjct: 318 ------SRTAVDVTREAVQILGGNGYAVDYRVERYYRDAKITEIYEGTSEIQKIVISREL 371

Query: 459 EK 460
            +
Sbjct: 372 YR 373


>gi|220916367|ref|YP_002491671.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954221|gb|ACL64605.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 385

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 135/374 (36%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P G  WD+    P   AL RR    GL                 + +  A      +   
Sbjct: 32  PHGREWDEAGSFP--RALFRRFGELGLFGIRQPPEVGGSGLDWWYVVAYAEELARCRNAG 89

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++     +  ++  + T    +++              AP  +      L ++E  
Sbjct: 90  LAVSMLVHGEMAIPVIGELGTEAQRREFL-------------APAVRGERVAALAISEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+AAI +  ++    +       W  +   +D F+ LA   G  G   +  LL    
Sbjct: 137 AGSDVAAIRTTARRDGADLVVNGSKMWITNGARAD-FLTLAVRTGEAGHGGLSLLLFPTD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIM 323
             G    R   K+G  S+ T  L F +        L         V        L +A+ 
Sbjct: 196 VKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQGFYHVMANFQGERLVAAVQ 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+GM++ L +A+ Y   R   G  +      +  +AD    + AA  L++R A+     
Sbjct: 256 AVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLTAVEAARWLTYRAADLLARG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        A     + K + C++A  V  + M+  GG GY+ E  IAR +R+  A +I 
Sbjct: 316 EP-------AVREISMAKLFACELAQRVAYDCMQLHGGMGYVLESDIARAWRDVRAMTIA 368

Query: 444 LGSGNAMVLDVLNL 457
            G+   M   V   
Sbjct: 369 GGTSEIMRELVSRA 382


>gi|330824270|ref|YP_004387573.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309642|gb|AEB84057.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 594

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 81/450 (18%), Positives = 160/450 (35%), Gaps = 52/450 (11%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIW 120
            ++     E A  A      L+      G RW    V     +    +    +G      
Sbjct: 36  DLVEAILHEAASYAAGVLDPLNRSGDQQGARWHDGAVSSADGFGDAWKSFCDNGWAGMPA 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
              +               ++  + L        ++ +   +A   +  + + +   + +
Sbjct: 96  AAEWGGQGLPVLVSTAVLEMWKSSNLAFSLCQMLTLGAVEAIAHHGSDALKRRFLEPMVA 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
             +  T             + LTE + G+D+AA+ S+     D  Y +SG+K F++    
Sbjct: 156 GRWTGT-------------MNLTEPQAGSDLAALRSRAMPEGDH-YRVSGNKIFITWGEH 201

Query: 241 D-----AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSN 284
           D       ++LA+  +   G   +   L            G  N L    +++K+G  ++
Sbjct: 202 DMAENIVHLVLARLPDAPAGVKGISLFLCPKFLANDDGTLGERNDLACTSIEHKLGIHAS 261

Query: 285 ATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F       G+L+G+ +     +  M     L+  +  V     +   A  YA  
Sbjct: 262 PTASMCFGERGGAIGYLIGEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARAYALE 321

Query: 342 RHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSE 388
           R   G         +   P ++R + D+     A  AL++  A   D      +A+ R+ 
Sbjct: 322 RVQ-GRPALAGSGTIAGHPDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHPDAQERTR 380

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A   ++ P+ K WC   A  + ++ M+  GG GY+EE   A++ R++   +I  G+  
Sbjct: 381 AQALVGLLTPVVKGWCTDNALGIASDGMQVHGGMGYVEETGAAQYLRDARITTIYEGTTG 440

Query: 449 AMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
                L    L  +G    + L   ++ D 
Sbjct: 441 IQANDLIGRKLAREGGATLKALLRRIDADA 470


>gi|228993442|ref|ZP_04153352.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus
           pseudomycoides DSM 12442]
 gi|228766264|gb|EEM14908.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus
           pseudomycoides DSM 12442]
          Length = 257

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 18/269 (6%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--CFLV 258
           +TE   G+D+A+I +  +K  D  Y ++G K F+++ + +D  I++ + +  +      +
Sbjct: 1   MTEPGAGSDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGM 59

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             L+ +    G    +   KIG  S  T EL F +       LLG+       + +    
Sbjct: 60  SLLVLERGMEGFKRGKKLKKIGLHSQDTAELIFEDVKVPASNLLGEEGKGFYYLMEKLQQ 119

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  AI + +   V L    +Y + R   G  + D   ++  +A++  +I         
Sbjct: 120 ERLIVAIAAKTAAEVMLHITKNYVQERKAFGKSISDFQTVQFRLAEMYTEIEIGRTFV-- 177

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                D+  +             + K+W   +A  V AE ++  GG GY+EE  IAR YR
Sbjct: 178 -----DDCIANHMNGENIVTKVSMAKWWLTDLAKKVSAECVQLHGGYGYMEEYEIARRYR 232

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           + P ++I  G+   M     N++ KG  L
Sbjct: 233 DIPVSAIYAGANEIMK----NIIAKGMGL 257


>gi|145593285|ref|YP_001157582.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302622|gb|ABP53204.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 398

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 127/390 (32%), Gaps = 36/390 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R ++ + +PA   +L      GL        +  +                  +  
Sbjct: 31  PHAQRLEQADEYPA--EILDGMREMGLFGLTIAEEYGGLGESLLTYALVVEELSRGWMSI 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A +++   +        PK+ + E             V     ++E   G
Sbjct: 89  SGIVNTHFIVAYLISQHGSVDQRARLLPKMATGE-------------VRGAFSMSEPECG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRL 261
           +D++AITS+  +            W  +   +     L + +       G +  FL+ + 
Sbjct: 136 SDVSAITSRAVRDGADYVLNGQKMWLTNGAYASVVATLVKTDTGADSVYGNMSTFLLEKE 195

Query: 262 LEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
              G    GL       K+G +   T E+            L  +         ++    
Sbjct: 196 PGFGETAPGLTIPGKIEKMGYKGVETTEMILDGVTVPESAVLGGADQVGRGFYQMMDGIE 255

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++ A  +      +   A  YA++R   G  L     +   +A++   I AA AL  
Sbjct: 256 VGRVNVAARACGISIRAFELAAAYAQQRRTFGQPLAKHQAVAFKLAEMGTKIEAAHALMV 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +    EA  A+++A        +    V+ EA    GG GY +E  I R  
Sbjct: 316 NAARLKDAGQRNDVEAGMAKLLA-------SEYCAEVVQEAFRIHGGYGYSKEYEIERLM 368

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           RE+P   I  G+       +   L K   L
Sbjct: 369 REAPFLLIGEGTSEIQKTIISRGLLKEYRL 398


>gi|309359980|emb|CAP31945.2| hypothetical protein CBG_13088 [Caenorhabditis briggsae AF16]
          Length = 611

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 77/475 (16%), Positives = 167/475 (35%), Gaps = 57/475 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DK        A+L +    G    +     E      +   R A +     L  G +M  
Sbjct: 89  DKRRTADIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGA 148

Query: 155 SVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +     + L  T    + + P + +                     LTE   G+D ++
Sbjct: 149 HQSIGYKGILLEGTDAQKQKYLPDLATG-------------RKFAAFALTEPSTGSDASS 195

Query: 214 ITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGS 266
           + ++ +  +DG       G  W  +   +D F + AQ      +G     +    + + +
Sbjct: 196 VRTRAELSADGKHYVLNGGKIWISNGGFADVFTVFAQTPIKQADGSTKDKM-SAFIVERA 254

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+     + K+G + + T E+ F N    +    N+     E  K+ +  L++    +
Sbjct: 255 FGGVTSGPQEKKMGIKGSNTTEVHFDNVKIPV---ENLLGKEGEGFKVAMNILNNGRFGI 311

Query: 326 -----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                  M+  + + + +   R   G  L +   ++  + ++   + A  ++ + L+++ 
Sbjct: 312 PAACTGAMKHCIQKTVDHITTRVQFGKKLEEFGNVQEKLVEMISKLYATESIVYMLSSNM 371

Query: 381 DEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D   K    EAA  +++A        + A  V  +A++  GG G++ E  + R  R+   
Sbjct: 372 DRGIKEYQLEAAIGKVLA-------SESAWLVCDDAIQVHGGMGFMRETGLERVLRDLRI 424

Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQL--------FSTLEQDLGSSGKKVITILRD 489
             I  G+ + + L +        G +L +Q          +      G++G     ++  
Sbjct: 425 FRIFEGANDVLRLFIALTGAQHAGKHLAQQASGVGGMISLAVSRVTGGNTGSNFGQVVDS 484

Query: 490 SISLCKEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFLDNCHSTH 542
           S+         A+ L ++IAL        L +     I   +  +R  +     +
Sbjct: 485 SLQDS------AKALDQQIALFGQTVQGLLMKHKKGIIDRQYEMHRVANAAIDIY 533


>gi|282866046|ref|ZP_06275094.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559085|gb|EFB64639.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 380

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 132/377 (35%), Gaps = 32/377 (8%)

Query: 89  PGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQ 145
           P  E+W  D +    AW A    +   GL        +         +    A  +  A 
Sbjct: 27  PYYEQWEQDGIVARDAWLA----AGRQGLLGLAVPEEYGGGGNDDFRYSAVLAEEFTRAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +    L   +      +  + T    + W P   S E                 + +TE 
Sbjct: 83  VPGLALGLHNDIIGPYLTSLATDEQKRRWLPGFCSGE-------------TITAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+ AI +  +   D  + L+G K F+S+ + +D  I++A+     G   +  ++ +
Sbjct: 130 GAGSDLQAIRTTAEDKGDH-WLLNGSKTFISNGILADLVIVVARTSPEGGAKGLSLIVVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSA 321
               G    R  +KIG +S  T EL F +        L       +  M  L    +  A
Sbjct: 189 RGAEGFERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGERDGAFLHLMTNLAQERMGIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  ++     L     Y + R   G  L     ++  IA++A + A             D
Sbjct: 249 VAGIAAAEHLLEITTRYVKEREAFGRPLAKLQHIRFEIAEMATECAVTRTF-------LD 301

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +   +     + A + K+W  ++   V    ++  GG GY+ E  +AR + +    +
Sbjct: 302 RCIADHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMTEYRVARAFTDGRIQT 361

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 362 IYGGTTEIMKEIIGRSL 378


>gi|256371531|ref|YP_003109355.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008115|gb|ACU53682.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 379

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 144/379 (37%), Gaps = 39/379 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    WD+ E  P     +R     GL    +   +            A      A    
Sbjct: 26  PNAAAWDREERFPL--EAVRTMGKLGLFGIPFPSRYGGGDGDFTSLCIAIEEVAKADSSL 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     AS +    T    + W P +   E                  GLTE   
Sbjct: 84  AITLSAGVGLGASPIYRFGTDAQRERWLPALVRGE-------------ALGAFGLTEPEA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D  A  ++ ++++D         +  +S   ++    + A+ +  +  F+VP      
Sbjct: 131 GSDAGATRTRAERVADRWRLRGEKAYITNSGTPITSVVTVTARTDEGISAFIVPA----- 185

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
              GL       K+G R++ T  +   +     +GD  +   P    +  L  LD   ++
Sbjct: 186 GTAGLTVLPSYRKLGWRASDTHGIVLEDA---EVGDDALLGAPGAGFRQFLATLDEGRVA 242

Query: 325 VSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++ + + L EA       +A+ R+  GG +     +   +AD+ + + A+  L +R A  
Sbjct: 243 IAALALGLQEACLREGLEWAKARNAFGGPIGRFQAIAFKLADLEVAVEASRHLVYRAAWL 302

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ +  + EAA       I K +  + A +   EA + +GG+G+IE+  +AR+YR++  
Sbjct: 303 RDQGRPFAREAA-------IAKLYATEAAVSAAREATQILGGAGFIEDTPVARYYRDAKI 355

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     L +   L
Sbjct: 356 LEIGEGTSEIQRLVIARSL 374


>gi|170582748|ref|XP_001896268.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Brugia malayi]
 gi|158596553|gb|EDP34881.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Brugia malayi]
          Length = 611

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 134/365 (36%), Gaps = 37/365 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
            +L +    G   ++    ++          R A +   + L    +M    +     + 
Sbjct: 105 DILSKLAEIGALGALVPEEYDGAGLNNTQFARVAEVIGESDLSLAVVMGAHQSIGYKGIL 164

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P + +                     LTE   G+D  ++ +  +K SD
Sbjct: 165 LYGTDEQKRKYLPDLATG-------------RKFAAFCLTESGTGSDANSVQTHAEKSSD 211

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           G       G  W  +   +D F + A+     +       +   + + S  G+     + 
Sbjct: 212 GRCYVLNGGKLWISNGSFADIFTVFARTQVKDKDGTSKSKMSAFIVERSHGGITTSIPEK 271

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV-----SGMRVS 331
           K+G + + TVE+ F NT   +    N+     E  K+ +  L++    +       M+  
Sbjct: 272 KMGIKGSKTVEVHFDNTKVPVD---NLLGAEGEGFKLAMNILNNGRFGIPAVCTGSMKFC 328

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEA 390
           + + I +   R   G  L +   ++  + D+ L   A  +L + L+   D+       EA
Sbjct: 329 IQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLRHYATESLLYMLSGLMDKGTVDYELEA 388

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A+IMA        + A  V   A++  GG GY++E  + R  R+     I  G+ + +
Sbjct: 389 ALAKIMA-------SENAWIVCDRAIQLHGGMGYMKECGLERVMRDLRIFRIFEGANDVL 441

Query: 451 VLDVL 455
            L V 
Sbjct: 442 RLFVA 446


>gi|262376554|ref|ZP_06069783.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308693|gb|EEY89827.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 602

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 99/494 (20%), Positives = 188/494 (38%), Gaps = 65/494 (13%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+V+   AW          GL C+  D +   +       +     ++ A         
Sbjct: 81  IDEVKT--AWQQF----ADAGLLCAQHDYADGGMQLPTLVNMACNAYFMSANPSTVAYSF 134

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +A+++    +P+  + + P + S  +  T             + +TE   G+ +  
Sbjct: 135 LTAAAANLIQAFASPKQKQIFLPHMLSGRFAGT-------------MAMTEPNVGSSLGD 181

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           + ++    +DGIY + G K F+S    D       ++LA+++        +  F+VP+  
Sbjct: 182 LNTKAIPQADGIYKIKGQKMFISGGDQDITENIVHLVLARIQDAPQGVKGISLFIVPKFK 241

Query: 263 --EDGS---PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKI 314
             EDGS    N +    L +K+G R   +  L F    N  G+L+G+       +  M  
Sbjct: 242 TNEDGSLGEANDVQLAGLLHKMGYRGTTSTVLSFGENDNCLGYLIGEPGHGLKYMFKMMN 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADI 362
              +   + +         E++ YA+ R   G              +I+   +KR +   
Sbjct: 302 EARVGVGLGAAMIGYRGYLESLDYAKNRPQ-GRPVHEKTPDSKPVNIIEHTDVKRMLLAQ 360

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
              +  + AL    A   DE ++  +E  A    ++ P+ K +     P     A++ +G
Sbjct: 361 KSYVEGSLALCLFAARLIDELQAAQDEDSAILLDLITPVVKSFPSAYGPKANDLAIQVLG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-----KGTNLFEQ-LFSTLEQ 474
           G+GY  E  + + YR++  N I  G+     LD+L         KG NL  Q +  TL +
Sbjct: 421 GAGYTREYPVEQCYRDNRLNPIHEGTYGIQSLDLLGRKLWQHNGKGLNLLMQRIQKTLSE 480

Query: 475 DLGSSGKKVITILRDSISLC-KEDKGLARFLTE---KIALASSAAALYRAGMNDIADVFL 530
                  ++  I +  ++   K  + L + L +     ALA+S   L   G   +A ++L
Sbjct: 481 IHEPKIVELAKIYKQHLATVQKTTQILGQALHQGKVSEALANSGLYLDMMGKTILAWLWL 540

Query: 531 ENRFLDNCHSTHCM 544
           E    +        
Sbjct: 541 E--MANQAQLKFGT 552


>gi|209520153|ref|ZP_03268926.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209499417|gb|EDZ99499.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 601

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 91/532 (17%), Positives = 182/532 (34%), Gaps = 70/532 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           A       +      E   +   ++ A   R+++ + PQ       G+R   V       
Sbjct: 29  ARHADHSRETFNAALETAHAVAVEKFAPHNRLSDEHEPQF-----DGQR---VTMPHEVK 80

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             L      G   +  D  +  +            L+  A +        +  +A+++  
Sbjct: 81  DALDAMRATGFLAAGKDYEWGGMQLPAVISFACLSLFKSANIATSSYAMLTSANANVIER 140

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + +                + +      + LTE + G+ ++ +T+     +DG
Sbjct: 141 FGSEAQKRKYL-------------GALLEGRAFGTMALTEPQAGSSLSDLTTTATPNADG 187

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPN 268
            + + G+K F+S    +       ++LA++ G       +  F VP+   +     G  N
Sbjct: 188 TWSIRGNKIFISGGDHELSENIVHLVLARIPGGPPGVKGISLFTVPKFRVNDDGSLGERN 247

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    L +K+G R   +  L F       G L+G+ +     +  M     +   + +V
Sbjct: 248 DVALAGLIHKMGWRGTTSTMLSFGEHGECVGELIGEPHHGLAYMFHMMNEARIGVGLGAV 307

Query: 326 SGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSF 374
                    ++ YAR R                 LI+   ++R +      +  A AL  
Sbjct: 308 MLGYRGYLASLDYARERPQGRHPSSKNPLDPQLPLIEHADVRRMLLAQKAYVEGAYALCL 367

Query: 375 RLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   DE        +R+E      ++ PI K W  +      + A++  GG GY  E 
Sbjct: 368 YAARLVDEQNTGESDDARAEAGLLLDLLTPIVKSWPSQWCLEANSLAIQIHGGYGYTREY 427

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGK----- 481
            + + YR++  N I  G+     +D+L      K     + L   L++ + ++ +     
Sbjct: 428 PVEQFYRDNRLNMIHEGTHGIQAIDLLGRKVTMKQGAALKLLARELQRTIDAAREHASLQ 487

Query: 482 -KVITILRDSISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIADVFL 530
              + +      L    + L   L      ALA++ A L   G   +A  +L
Sbjct: 488 AHAVALGAAWRDLSGTLEALLPALASDTDRALANANAFLEAFGHIVLAWTWL 539


>gi|126663963|ref|ZP_01734957.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126623912|gb|EAZ94606.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 596

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 75/444 (16%), Positives = 161/444 (36%), Gaps = 47/444 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++R++   G        ++  +     + +        A               +M + 
Sbjct: 62  DIMRKAGELGYLSVAVPAAYGGMEMGFVNTVLVCDYISGATGSFSTAFGAHTGIGTMPIT 121

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E+                  LTE   G+D  +  ++     D
Sbjct: 122 LYGTEEQKQKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 168

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G       G  W  ++   +  I+ A++E      +   ++E+   NG+     ++K+G 
Sbjct: 169 GTHYKITGGKMWISNAGFCNLMIVFARIEDDK--NITGFIVENDPSNGISMGDEEHKLGI 226

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           RS++T ++ F+ T   +    N+  G  E  KI +       +  A   +   R ++  A
Sbjct: 227 RSSSTRQVFFNETKVPV---ENMLAGRGEGFKIAMNALNVGRIKLAAACLEAQRRTVTGA 283

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------AKSRSE 388
           +HYA  R      +     ++  IA++A +  A  + ++R A+  +          +  +
Sbjct: 284 VHYANERVQFKTPISSFGAIQAKIAEMATNAYAGESATYRAASDIENRINIRVNEGNSHQ 343

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   I K    +   +   E ++  GG G+ E+  +   +R++    I 
Sbjct: 344 EAELKGVEEFAIECSILKVAVSEDVQSCTDEGIQIFGGMGFSEDAPMESAWRDARIARIY 403

Query: 444 LGSGNAMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
            G+     +  + +L     KG          + ++L       I    +     +E + 
Sbjct: 404 EGTNEINRMLSVGMLVKKAMKGHVDLLGPAMAVAEELMGIPSFDIPDYSEL--FAEEKEM 461

Query: 500 LARFLTEKIALASSAAALYRAGMN 523
           +A+   +K+ L  + AA+ + G  
Sbjct: 462 IAKL--KKVFLMVAGAAVQKYGPE 483


>gi|159897777|ref|YP_001544024.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890816|gb|ABX03896.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 415

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/430 (16%), Positives = 143/430 (33%), Gaps = 38/430 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +L  T ++ A       P +  +   G   +          +++R    G       + 
Sbjct: 17  DMLRKTVRDFAE--KEVAPYIQEWDRKGAG-EHAGTAEHMLPIIKRMGELGFLGVCLPQK 73

Query: 124 FEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +           +    L  +       L   +  ++  V    T    + +        
Sbjct: 74  YGGAGFDYLGLAVVCEELERVDTSLRVILSVHTGLNSLAVFQWGTEEQKQKYL------- 126

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P    +      LTE   GTD+A + S      D         W   S ++D 
Sbjct: 127 ------VPQATGAKIAAYCLTEPNAGTDVAGMQSTAVLEGDHYILNGEKTWISLSDLADH 180

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F+++A  +       +   + + S  G+    +  K+G R+  T  + F N    +    
Sbjct: 181 FLVVAYTDKSKKQRGMTAFIVERSFEGVSTMPIHGKLGVRAGNTGSVVFENVRVPV---A 237

Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356
           N      E  KI +  LD+   +V+     L +A     + YA+ R   G  +    ++K
Sbjct: 238 NRLGEEGEGFKIAMTALDNGRYTVATGATGLIQAALEASVKYAKERETFGVPIGQHQLVK 297

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           R I+ + L +  A  L +R     ++    + E   A+  A +  + C         +A+
Sbjct: 298 RMISHMVLKLETARLLCYRAGWLKNQGIRNTRETTLAKWHATVESFNC-------ANDAI 350

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           +  G  G+ +E  + R+ R S    I  G+          LL+    L E+    L  +L
Sbjct: 351 QIHGAYGFSDEYPVERYLRNSRGAVIYEGTRELQ-----ELLQADFALSERENKPLRCEL 405

Query: 477 GSSGKKVITI 486
            +  ++    
Sbjct: 406 PAYDEEAWNA 415


>gi|148237504|ref|NP_001090479.1| acyl-CoA dehydrogenase (3J649) [Xenopus laevis]
 gi|114108055|gb|AAI23151.1| MGC154345 protein [Xenopus laevis]
          Length = 423

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P   +W++    PA H + +   + GL        +  +    ++ I  A        
Sbjct: 61  INPYVNQWEEAGQFPA-HKVFKILGNAGLLGVNKPPEYGGMGLDFSYSIAVAE------- 112

Query: 147 EAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           E G++    V  A  V + M TP +      +  S E      AP     V + LG++E 
Sbjct: 113 ELGNIRCGGVPMAIGVQSDMATPAL-----TRFGSDELKRQFLAPTIAGDVVVCLGVSEA 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A+I +   K  D         W  S   +D   +LA                  
Sbjct: 168 GAGSDVASIKTTAVKKGDDYIINGSKMWTTSGCQADWMCLLANTSAGPPHRNKSLFCLPM 227

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
              G+   +   KIG +S+ T ++ F +      +L+G+  +             +  A 
Sbjct: 228 KTPGVQVTKKIEKIGMKSSDTAQIFFEDVRVPSKYLIGEEGMGFTYQMLQFQEERMWGAA 287

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             ++ M   + E I Y  +R V    ++   V+   +A++A ++    +L +R    + E
Sbjct: 288 NVLTTMENIIQETIDYTSQRKVFNQPVLHNQVVHFRLAELATEVELLRSLLYRAVAMYVE 347

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++       +A + K    ++A  +    ++  GG G+  E  ++R YR+S   SI
Sbjct: 348 GNDVTK-------LASMAKLKAGRLARELSDSCLQFWGGMGFTNEVLVSRFYRDSRLLSI 400

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+  +   +
Sbjct: 401 GAGADEVMLSIICKYM 416


>gi|149048721|gb|EDM01262.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b
           [Rattus norvegicus]
          Length = 438

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 146/414 (35%), Gaps = 50/414 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
              +  FP V  +EL  + ++V       L +  N              + D+    PA 
Sbjct: 54  QKGVFPFPEVSQEELSEINQFVG-----PLEKFFNEEV--------DSRKIDQEGKIPA- 99

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              L +    GL        +  +        R   +  M       L +        + 
Sbjct: 100 -DTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGII 158

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L+        + PK+ S E+                  LTE   G+D A+I ++     D
Sbjct: 159 LVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDAASIQTRATLSED 205

Query: 224 GIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             Y  L+G K W  +  +++ F + A+      +G +   +    + +    G+   + +
Sbjct: 206 KKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKM-TAFIVERDFGGITNGKPE 264

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS---- 331
           +K+G R + T E+ F NT   +   L  V  G    M I   L+S   S+          
Sbjct: 265 DKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRFSMGSAVAGMLKK 321

Query: 332 -LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            + +   YA  R      L +  +++   A +A       ++++  +   D+        
Sbjct: 322 LIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPD--- 378

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               I A + K +  + A   ++EA++ +GGSGY+++    R  R++    I  
Sbjct: 379 --CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFE 430


>gi|154331159|ref|XP_001562019.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059341|emb|CAM37043.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 511

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 133/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 161 PVAAEYDRSMKYP--HEVYKQAWELGLTNMHIPEKYGGLGASVMDGLIVQEELAYACTGM 218

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T    K +  ++              +  +     +TE  GG
Sbjct: 219 ATAFDGNNLAEAPLLIAGTDAQKKKYLGRMV-------------EEPLLAAYCVTEPTGG 265

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  ++  + +LA+ EG    F+V     D +  
Sbjct: 266 SDVAGLKTTARKEGDRWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-----DANAP 320

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+     +  +G R + T  + F N        +     G    M++        AI +V
Sbjct: 321 GVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTRSSVAIAAV 380

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 381 GLSRRATDEATRYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAGWDTDQGRR 440

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA         +A      A++  GG+GY     + + YR+    SI  G
Sbjct: 441 NTYYASCAKMMAA-------NLAEKCATNAVQIFGGNGYNTGYPVEKLYRDCKIFSIYEG 493

Query: 446 SGNAMVLDVLNLL 458
           +       V   +
Sbjct: 494 TTQIQHTIVSRYV 506


>gi|70607926|ref|YP_256796.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68568574|gb|AAY81503.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 131/359 (36%), Gaps = 30/359 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L ++   GL      + +            A              ++      + + L  
Sbjct: 52  LEKAKELGLFGISVPQEYGGQSGDMLMSTIAVEEMSRVWPSFTARVTVGNLFMTPILLFG 111

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K +               P+ +         TE + G+D+A I S  +K+ DG Y
Sbjct: 112 SEEQRKKYV-------------TPVARGDKVAAFANTEPQAGSDVAGIQSTAKKV-DGGY 157

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            L+  K F+++  ++D +++ A+    E       +   + +    G+        +G R
Sbjct: 158 VLNARKIFITNGGIADYYVVTARTSPPEPNARWKGISMFIVEREWKGVKVLNRIETLGLR 217

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T EL F   +      +       +    +   D + + V+G  + +A+A      +
Sbjct: 218 ASNTAELAFEEVYVPQENLVGEEGSAFKYA--MTTFDVSRVGVAGQALGVAQAALEKMTN 275

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y+ +R   G  L+   +++  IA+   ++ AA  L++  A+  D+ K      A     A
Sbjct: 276 YSVQRSAFGSPLLGFQMVQEKIAETLTEVNAARLLTYWAASLIDQRKVDEGIVA-----A 330

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + KY+  ++A      A+   GG G      + R  R+     I  G+ +   L VL 
Sbjct: 331 SMAKYFATEVAERAAIRAITVHGGYGVATSTGVERLLRDVEVMKIYEGANDIQKLVVLK 389


>gi|28872134|ref|NP_794753.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855388|gb|AAO58448.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 600

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 92/505 (18%), Positives = 176/505 (34%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            +    P     +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYEH--------GEAILIPEVKPAVDAFIAAGFLNASRDFHAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++                 S E+      PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFG-------------SDEHKQRFLQPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         A+ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYALDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 SAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   + + ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTALKQLLRLIANTCERAQAHESLVKLRQPLEQLVARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|323650076|gb|ADX97124.1| mitochondrial acyl-CoA dehydrogenase family member 9 [Perca
           flavescens]
          Length = 340

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 125/331 (37%), Gaps = 30/331 (9%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R A +  +    A  L +        + +  +    + + PK+ S E+           
Sbjct: 10  ARLAEITSLDGSIAVTLAAHQAIGLKGILIAGSEAQKQKYLPKLASGEH----------- 58

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSP-MSDAFIMLAQVE-- 250
                  LTE   G+D A+I ++     D   Y +SG K ++S+  M+D   + A+ E  
Sbjct: 59  --IAAFCLTEPGSGSDAASIQTRATLSEDLKHYLISGSKIWISNGDMADVMTVFARTEVV 116

Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
              V    +   + + +  G+   + ++K+G R + T E+ F N    +   +    G  
Sbjct: 117 VDGVKKDKISAFIVERAFGGVTSGKPEDKLGIRGSNTCEVSFDNVPVPVENVIGEIGGGF 176

Query: 310 EDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +    +  L+S   S+           +     YA  R      L +  +++   A +AL
Sbjct: 177 KVAMNI--LNSGRFSMGSSSAGMIKKLIEMTAEYAATRKQFNKSLAEFGMIQEKFALMAL 234

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +     ++++  A   D  +    + +     A + K +  +      +EA++ +GG GY
Sbjct: 235 NAFVMESMAYLTAGMMD--RPGLPDCSL---EAAMVKVFSSEGGWICTSEALQILGGLGY 289

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
            +     R+ R+     I  G+   + + + 
Sbjct: 290 TKNYPYERYVRDCRILPIFEGTNEILRMYIA 320


>gi|148703116|gb|EDL35063.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_c [Mus
           musculus]
          Length = 571

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 149/417 (35%), Gaps = 40/417 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILLGSG-NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
              I  G+    + L +    L   G  L  ++      ++ +  + +   LRDS+ 
Sbjct: 425 ILLIFEGNQWRILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLG 481


>gi|297154172|gb|ADI03884.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 387

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL+ +    G+        +          +          +     M      A ++  
Sbjct: 42  ALIEQMKQLGIFGLAVPEEYGGTPVSTPCYVLITEELARGWMSLAGAMGGHTVVAKLLLH 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++ + E   T             + LTE  GG+D+ A+ +   + +DG
Sbjct: 102 FGTEEQKRHYLPRMATGEIRAT-------------MALTEPGGGSDLQAMRTVAHREADG 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  +S  S    +L +   +       +  LL +  P GL   R   K+G +
Sbjct: 149 YVVSGSKTWITNSRRSQLIALLCKTGPDATPAHQGISILLAEHGP-GLTVSRDLPKLGYK 207

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
              + EL F          L      G  + MK L    L  A  ++   R +  +A+ Y
Sbjct: 208 GVESCELSFDGYRAPADAVLGGVEGKGFAQMMKGLETGRLQVAARALGVGRAAFEDALAY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A  + AA  L+   A   D  +    EA  A     
Sbjct: 268 AQERESFGTPIWKHQSIGNYLADMATSLTAARQLTLYAAREADAGRRVDMEAGMA----- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +   A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 323 --KLFASETAMQIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIAAQL 380

Query: 459 EKGTNL 464
            K   L
Sbjct: 381 VKRGGL 386


>gi|149377154|ref|ZP_01894903.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893]
 gi|149358572|gb|EDM47045.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893]
          Length = 600

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 80/494 (16%), Positives = 172/494 (34%), Gaps = 61/494 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +VE  P            G     +D     +   ++        +  A          +
Sbjct: 71  QVEMLPQVKEAFDAYADAGFIAGRYDYELGGMQLPESVMAACNGFFTAANPGTAGYPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++ +    +    + P + S  +  T             + LTE   G+ +A I 
Sbjct: 131 TAAANLIRVFGNDQQKSTFLPHMLSGRFTGT-------------MALTEPHAGSSLADIR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           +      +G Y + G K ++S            ++LA+V+G       +  F+VP+ + D
Sbjct: 178 TSATPTDEGHYLIKGAKIYISGGEQSLTENIVHMVLAKVKGAPAGVKGISLFIVPKFIVD 237

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
                   NG+    L +K+G R   +  L F +     G+L+G+ +     +  M    
Sbjct: 238 EDGNATERNGVNLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVGEPHQGLKYMFQMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALD 365
            +     +          ++ YA+ R                 +I+   ++R +      
Sbjct: 298 RVGVGFGAAVIGYRGYMHSLEYAKDRLQGRKPSEKNPEAPQVPIIEHADVRRMLLAQKAY 357

Query: 366 IAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                AL    A   D+  +  +E           ++ P+ K W  +  P     A++  
Sbjct: 358 SEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAWPSEFGPKANDLAIQVY 417

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG+GY  E  + + +R++  N I  G+     LD+L   + +  ++  + L   ++ DL 
Sbjct: 418 GGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKIWQDQSHGLQLLMQEMQVDLE 477

Query: 478 SSGKK-----VITILRDSISLCKEDKGLARFLTE---KIALASSAAALYRAGMNDIADVF 529
           ++         +++        K  + L + L        LA+++  L+  G   ++ ++
Sbjct: 478 AATTDRCQQWALSLSETLQQAVKVTQSLGKSLMSEDPDRVLANASCYLHLFGHIIVSWMW 537

Query: 530 LENRFLDNCHSTHC 543
           L  R  +       
Sbjct: 538 L--RQANAAAKALG 549


>gi|111022859|ref|YP_705831.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822389|gb|ABG97673.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 464

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 143/395 (36%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P    +L ++  +G +  ++ R         +  +    L+       
Sbjct: 28  PVAAEHDRAQEFP--WDVLEKAAQEGFYSPLFYRDLIGDPTGLSLPLFMEELF-WGCAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + S +    TP     WAP+ F    +P N            L ++E  GG
Sbjct: 85  GLAVVMPALALSSIGQAATPEQMLRWAPECFG---EPGNL-------KLAALCISEPEGG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +   +  D         W  +  ++D  ++ A V+  +G       +  G   
Sbjct: 135 SDVRNLRTTATRDGDEWVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVPGGSP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------------- 315
           G+   R  +K+G R++ T EL+F          L         M+               
Sbjct: 195 GIELVRKLDKLGCRASHTAELKFHQVRVPADHLLGGDDKLQNRMRKAREVQEEVATGAPQ 254

Query: 316 -----------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                           A  ++   R +L  A  YA RR   GG +ID   +   +AD+A 
Sbjct: 255 RKSATLGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLAT 314

Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            I AA  L++R +       + R  E + A++ A        ++A      A++ +GG G
Sbjct: 315 QIDAARLLTWRASWMAAAGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI +  + + YR++   +I  G+     + +   L
Sbjct: 368 YISDHPVEKWYRDAKLYTIFEGTSEIQRMVIGRAL 402


>gi|212543523|ref|XP_002151916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210066823|gb|EEA20916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 611

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 128/575 (22%), Positives = 218/575 (37%), Gaps = 94/575 (16%)

Query: 19  SDSLFALNQP--PLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           S   F  +QP  P       Y  D  L  +I+       PS +  EL    E+VLS    
Sbjct: 6   STKGFFQHQPSLPP-----QYLEDRALNRIISFHLPTPTPSSISNELLQFSEFVLSKPVL 60

Query: 72  ELARMANYNTPQLHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                +  + P L      GE  R D +     W  L    I +G+    ++RS      
Sbjct: 61  GYIADSEKHPPYLKPLTSFGEENRDDPLVTSEGWRRLQEIGIAEGIVALAYERS-----E 115

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--------TPRVHKDWAPKIFSR 181
           +   +I     Y +    +G +  PS  +     L+         T  V K    ++ SR
Sbjct: 116 RWNPRIHQFVKYHIWSGSSGIVTCPSAMTDGAAKLLGKHLDDDSETKEVFKSARERLISR 175

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---------------GIY 226
           E            +   G  +TE++GG+D+    +   K+SD               G +
Sbjct: 176 ENGF---------AWTSGQWMTERKGGSDVRGTETIAVKLSDVQSRDGGLDANGQPLGPW 226

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLE-------DGSPNGLCYQRLKNK 278
            + G KWF S+  ++  I+LA+  + ++  F  P               NG+  QRLKNK
Sbjct: 227 RVDGFKWFSSATDANMTILLAKTGDNQISAFYAPLRRRVANAANGKTELNGIKIQRLKNK 286

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G ++  T E+E      +L+G        +  +  +  + + + SV      LA +  +
Sbjct: 287 LGTKALPTAEIEIKGMRAYLIGKQGQGVKEISHVLNITRMQNIVSSVGAWGRGLAISRAF 346

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------- 390
           AR R+V G +L D P   R +A   +   A   LSF +A     ++  ++ +        
Sbjct: 347 ARVRNVGGKLLCDVPAHVRGLAQEHVKYTAHMHLSFFIAALLGRSEGSNDTSSAASSIIP 406

Query: 391 -------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE----ERSIARHYRESPA 439
                  A  R++ PI K      A   +   ME +GG GY+E    E +IAR +R++  
Sbjct: 407 QDINRINALYRLLTPIAKAQTALSAINGLRACMESLGGVGYLENEDPELNIARLFRDTNV 466

Query: 440 NSILLGSGNAMVLDVLNLLEKGTN------LFEQLFSTLEQDLGSSG-----KKVITILR 488
            +I  G+ + M  D + ++++G +       FE+      +  GS+G      K+ T+  
Sbjct: 467 LAIWEGTTDIMADDFMRVVKRGKDGAKVLEYFEEWLGESFRVAGSAGLTDEAGKLRTVAE 526

Query: 489 DSISLC-----KEDKGLARFLTEKIALASSAAALY 518
            ++        +E     R     I        L 
Sbjct: 527 QTLKDLGSKDKEELAWRGRDYLRDIDWLVCGCLLI 561


>gi|238026355|ref|YP_002910586.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
 gi|237875549|gb|ACR27882.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1]
          Length = 395

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 128/364 (35%), Gaps = 31/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             AR           +MS  S      +    
Sbjct: 56  REMGEIGLLGPTIPEQYGGPGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINAFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ S E+                 GLTE   G+D   ++++ + +  G  
Sbjct: 116 SEAQKQKYLPKLASGEW-------------IGCFGLTEPDHGSDPGGMSTRAKPVPGGYV 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D FI+ A++E   G   +   + +    GL    +  K+G R++ T
Sbjct: 163 LSGAKMWITNSPIADVFIVWAKLE-ENGEDAIRGFILEKGWKGLSAPAIHGKVGLRASIT 221

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+     F     + N   G          LDSA   +S   +  AE+  +  R     
Sbjct: 222 GEIVLDEVFVP---EENRLPGVKGLRGPFTCLDSARYGISWGALGAAESCWHTARQYVLD 278

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K
Sbjct: 279 RKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMK 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  V   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G
Sbjct: 332 RNSCGKALEVARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTG 390

Query: 462 TNLF 465
              F
Sbjct: 391 IQAF 394


>gi|149410675|ref|XP_001506493.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 476

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 120/349 (34%), Gaps = 32/349 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L++R+   GL  S    S   +                        +  +      V + 
Sbjct: 120 LIKRAWELGLINSHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVIIA 179

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+A + ++ +K  D  
Sbjct: 180 GNEQQQKKYLGRMT-------------EQPMMCAYCVTEPGAGSDVAGLKTKAEKKGDEY 226

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+                + +    G+   R +  +G R
Sbjct: 227 VINGQKMWITNGGKANWYFLLARSNPDPKAPASKAFTGFIVEADTPGIQIGRKELNMGQR 286

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +          A  +V   + +L EA 
Sbjct: 287 CSDTRGIVFEDVRVP---KENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEAT 343

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L++   +   +A++A+ +  A     R A   D  +  +         
Sbjct: 344 KYALERKTFGRLLVEHQAVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNT-------YY 396

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           A I K +   +A  + ++A++  GG+G+  +  + +  R++    +L G
Sbjct: 397 ASIAKAFAGDIANQLASDAVQIFGGNGFNSDYPVEKLMRDAKIYQLLEG 445


>gi|240171581|ref|ZP_04750240.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium kansasii ATCC 12478]
          Length = 388

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 135/372 (36%), Gaps = 31/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEDYGGMGGDYFALALALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    T    + W P + +                  G GLTE   G+D  +
Sbjct: 95  AVGLGAMPIYRFGTEEQKRKWLPDLTAG-------------RALAGFGLTEPGAGSDAGS 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLLEDGSPNG 269
             +  +   D  + ++G K F+++  +D    + +  V G V  G   +  ++      G
Sbjct: 142 TRTTARIEGDE-WIINGSKQFITNSGTDITSLVTVTAVTGSVADGKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
              + + NK+G  ++ T  L F++        L    TG    + IL    +  A ++  
Sbjct: 201 FVVEPVYNKVGWNASDTHPLTFTDARVPAENLLGARGTGYANFLSILDEGRIAIAALATG 260

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  + E++ YA+ R   G  +     +   IA +      A    +  A      K  
Sbjct: 261 AAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYEAAAKMLAGKPF 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA       I K    + A     +A +  GG G++ E  +ARHYR+S    I  G+
Sbjct: 321 KKEAA-------IAKMVSSEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKVLEIGEGT 373

Query: 447 GNAMVLDVLNLL 458
               ++ +   L
Sbjct: 374 TEVQLMLIARSL 385


>gi|311108641|ref|YP_003981494.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763330|gb|ADP18779.1| acyl-CoA dehydrogenase, N-terminal domain protein 21 [Achromobacter
           xylosoxidans A8]
          Length = 383

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 133/372 (35%), Gaps = 36/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +K    P    L+ +    G                               L    +++ 
Sbjct: 33  EKARTFP--FDLMPKLAELGYLGGNLPEDQGGHGIDMPTWAMMMEELGYHWLSLRTIVNI 90

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  S   +A   +P   + +               P+    +    GLTE   G++IA I
Sbjct: 91  TNGSIKRLAAHGSPAQKEKYLK-------------PLMAGRLKACTGLTEPNTGSNIAGI 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNG 269
            ++ + + D         W  +   +D  +++A+      EG++  F+V R L +     
Sbjct: 138 QTRAELVGDEWVINGRKLWITNGCDADFAMVVARTFSPTCEGKLSTFIVERALANYDV-- 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---MKILIYLDSAIMSVS 326
               R  + +  R   T EL F++        + V    +           L+ A+ +V 
Sbjct: 196 ----RKLDTMVLRCTGTAELGFTDVRIPKENLVGVEGAALAGTLKGLDAARLNIAMGAVG 251

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L  +I YA++R   G  +    ++++ I D+ + + AA AL  R A++ +  K  
Sbjct: 252 AAQAALDMSIDYAKQREQFGRPIGSFQLVQKHIVDMTVRVEAARALGMRAAHALEAGKDV 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +          I K +  + A  V   A++  GG GY EE  I R +R++    I  G+
Sbjct: 312 RQA-------CSIAKLYATEAAHEVANMALQVHGGLGYSEEYPIERIFRDTRGGMIPEGT 364

Query: 447 GNAMVLDVLNLL 458
                L     +
Sbjct: 365 TEIQTLIAGREI 376


>gi|288541495|gb|ADC45567.1| acyl-CoA dehydrogenase [Streptomyces nanchangensis]
          Length = 387

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 124/366 (33%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL+ +    G+        +          +          +     M        ++  
Sbjct: 42  ALIEQMKRLGIFGLAVPEEYGGTPVSTPCYVLITEELARGWMSLAGAMGGHTVVGKLLLH 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P++ + E   T             + LTE  GG+D+ A+ +  ++ +DG
Sbjct: 102 FGTEEQKRHYLPRMATGEIRAT-------------MALTEPGGGSDLQAMRTVARRAADG 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  +S  S    +L + +         V  LL +  P GL   R   K+G +
Sbjct: 149 YVVSGSKTWITNSRRSQLIALLCKTDPDATPAHQGVSILLAEHGP-GLTVSRDLPKLGYK 207

Query: 283 SNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              + EL F          L G        +        L  A  ++   R +  +A+ Y
Sbjct: 208 GVESCELSFDGYRAAADAVLGGVEGKGFAQMMKGLETGRLQVAARALGVGRAAFEDALAY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +     +   +AD+A  + AA  L+   A   D  +    EA  A     
Sbjct: 268 AQERESFGTPIWKHQSIGNYLADMATSLTAARQLTLYAAREADAGRRVDMEAGMA----- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +   A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 323 --KLFASETAMQIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIAAQL 380

Query: 459 EKGTNL 464
            K   L
Sbjct: 381 VKRGGL 386


>gi|294628120|ref|ZP_06706680.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831453|gb|EFF89802.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 408

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 133/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDSTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVINGTKTWATNGGIANVHVVVASVDPELGSKGHASFIIPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  G    +   K G R++ T E+   N        L                +    E 
Sbjct: 195 NTPGCSQGQKFKKHGIRASHTAEVILDNVRVPGSCLLGGKEKLDERLARAREKAKKGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YAR R   G  +ID   +   +AD+A 
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYARTREQFGRPIIDNQGVAFQLADMAT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  + +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 SVDAARLMVWRASWMAINGKPFTAA------EGSMSKLFASETAKKVTAQAIQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   +
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTI 402


>gi|254241285|ref|ZP_04934607.1| hypothetical protein PA2G_01980 [Pseudomonas aeruginosa 2192]
 gi|126194663|gb|EAZ58726.1| hypothetical protein PA2G_01980 [Pseudomonas aeruginosa 2192]
          Length = 374

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 134/393 (34%), Gaps = 36/393 (9%)

Query: 71  QELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           +ELAR        P LH +   G     +     W      +   GL CS     +    
Sbjct: 13  RELARRFVDREIVPYLHEWEKNG-----IVPKDVWLK----AGELGLLCSAVPEEYGGSG 63

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               H          A   A    + S   A  +    +    + W P++ S E      
Sbjct: 64  GDYGHSAVMIEELARANATAVGFTTHSEIVAHYILAYGSEEQKQKWLPRMVSGE------ 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  +   + ++E   G+D+ ++ +  ++  D  Y +SG K F+++  +   ++ A 
Sbjct: 118 -------LIAVIAMSEPGIGSDLRSMRTLARRDGDD-YIVSGQKTFITNGGNAGLMVTA- 168

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
            +       +  +  +    G    RL  KIG +   T EL F          LG+    
Sbjct: 169 TKLDPAAKELTLICIEEERQGFSKGRLLEKIGLKGQDTAELFFDEVRVPASNRLGEEGQG 228

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +        L  AI +   +   L E I Y R R V G  ++D    +  +A+    
Sbjct: 229 FKYLTHQLAWERLIIAIRAAQSIHTLLEETIEYTRERKVFGKPVLDFQNTRFKLAEAKAQ 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                             +  ++ AA A+++         +M   ++ E ++  GG G++
Sbjct: 289 ATMLRVFVDDCLAKVMRGELSADVAAMAKLL-------GSEMQGKLLDEFLQLHGGYGFM 341

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  I+R + ++    I  G+   M   +   L
Sbjct: 342 SEYKISRAWVDARVARIYGGTSEIMKEIIGRTL 374


>gi|119504711|ref|ZP_01626789.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459316|gb|EAW40413.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 383

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 130/361 (36%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L  ++   G  C     ++        + +          +     +  S      + 
Sbjct: 41  RSLWTKAGAQGYLCPTVSEAYGGAGADYRYNVIVGEELSDLGMAGVGFILHSDIVVPYIE 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +      + + PK  S E             +   + +TE   G+D+  I S      D
Sbjct: 101 NVGNEAQKQKFLPKCISGE-------------IVTAIAMTEPGTGSDLQGIRSSAVDCGD 147

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y L+G K F+SS   +D  I++ +       G      LL +    G    R  +K+G
Sbjct: 148 H-YLLNGAKTFISSGQQADVVIVVCRTNDAPDAGAKAFSLLLVERGMPGFERGRNLDKVG 206

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F++        L     G +  M+ L    L  A  +V+    +L   + 
Sbjct: 207 QKAADTSELFFNDVKVPKENLLGEEGMGFMYLMQELPQERLTIAASAVAATEAALTMTVA 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  + D    +  +A +  ++ A      R A         + +A+ A+++A
Sbjct: 267 YVKERSAFGKRIADFQHTQFQLAQLDAEVTAMRTFVDRCAELHLSKALSAVDASKAKLLA 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   ++   V+ + ++  GG GY+ E  IAR Y ++    I  G+   M L +   
Sbjct: 327 -------TELQCKVVDDCVQMHGGYGYMTEYPIARAYADARVQRIYGGTSEIMKLIIGRD 379

Query: 458 L 458
           L
Sbjct: 380 L 380


>gi|84502508|ref|ZP_01000644.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389320|gb|EAQ02117.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 594

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 97/519 (18%), Positives = 191/519 (36%), Gaps = 66/519 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +   +  AR+ + N P   +          V+  P     +R     G   + +   
Sbjct: 45  RLAASHFEPYARLGDENEPTYES--------GTVQMIPETGEAVRAFADAGFIAAPFGEE 96

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           F      +        ++  A +        +  +A M+A      +   +         
Sbjct: 97  FGGPKLPETVVQALYFIFATANIAFQGYGMLTAAAARMLATFGDDDIKARYL-------- 148

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
                +PM +      + L+E + G+ ++ IT+Q ++  DG Y +SG K ++S    +  
Sbjct: 149 -----SPMLEGRFLGTMCLSEPQAGSSLSDITTQARRREDGTYSISGRKMWISCGDHNIS 203

Query: 243 ----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA++         +  F+VP+   D     G  N +    L +K+G ++    
Sbjct: 204 ENIIHLVLAKLPDSPPGVKGISLFVVPKYRVDADGQIGVQNDVALAGLNHKMGYKATTNC 263

Query: 288 ELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            L F    +  G+L+G  +     +  M     +   + + +  +     ++ YAR R  
Sbjct: 264 ALNFGENGDCIGYLIGKEHQGLRYMFQMMNEARIAVGVGATALGQCGFQASLAYARERPQ 323

Query: 345 SGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-- 391
                          L D   ++R +      +  A AL    A+  D A S SEE    
Sbjct: 324 GRHPDNKDATKPQVLLTDHADIRRLLLAQKAAVEGALALCLYCASLVDLAASTSEEDERH 383

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ PITK W  +        A++ +GG+GY  +  I R YR++  N I  G+ 
Sbjct: 384 EAELLLEMLTPITKSWPSEFCLEANKHALQVLGGAGYTRDYPIERCYRDNRLNPIHEGTH 443

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARFL 504
               LD L   +L + +   + L   +  D+ ++ + V   L +S+    E  + + R L
Sbjct: 444 GIQGLDFLGRKVLMQDSAGVKLLVERIRTDMAAANRTVSPDLIESLDEALERFEVVTRSL 503

Query: 505 TEKIAL-----ASSAAALYRAGMNDIADVFLENRFLDNC 538
           TE++A       ++A          +   ++  R L   
Sbjct: 504 TEEVARDRRAGLANATLFLDFA-GHLVLAWMHLRILRAA 541


>gi|264680266|ref|YP_003280176.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210782|gb|ACY34880.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 535

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 87/461 (18%), Positives = 156/461 (33%), Gaps = 63/461 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P +    +     G                          +L A      +    
Sbjct: 19  KVTTPPGFAQAYQDFWQAGWPALACAEEDGGQGLPWV-LEGVLYEWLSAANHGWTMAPGL 77

Query: 156 VTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  A   +    +  +   + PK+ S E+                + LTE   G+D+  +
Sbjct: 78  LHGAYECLKHHGSDALKAAYLPKVASGEW-------------LATMCLTEAHAGSDLGQV 124

Query: 215 TSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVP 259
            +Q   +        + +SG K F+S    D       ++LA++ G       +  FLVP
Sbjct: 125 RTQAVPVGESEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGAPAGPKGLSLFLVP 184

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +LL  G  N +  +R++ K+G   + T  + F    G+L+G        +  M     L 
Sbjct: 185 KLLPGGERNRVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGLNAMFVMMNAARLH 244

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI---------------LIDQPVMKRAIADIAL 364
            A+  +  +  +  +A  YA  R                     +I+ P ++R +     
Sbjct: 245 VALQGIGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIEHPAIRRTLDLQRA 304

Query: 365 DIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +     L++       +A   + A+ R +   +  ++ P+ K    + A    +  ++ 
Sbjct: 305 WVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPVLKAAWTQQAFEGASACLQV 364

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
            GG GYI E  I +  R+S    I  G+       L V  +L  G     Q   TL   L
Sbjct: 365 FGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQAMGQWLLTLRNSL 424

Query: 477 GSSGKKVITILRDSISL----------CKEDKGLARFLTEK 507
            +       +LR    L          CKED  LA  + + 
Sbjct: 425 DAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLAWRVADD 465


>gi|242210493|ref|XP_002471089.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729879|gb|EED83746.1| predicted protein [Postia placenta Mad-698-R]
          Length = 363

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 131/383 (34%), Gaps = 41/383 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E       L++     GL                   I A             +   
Sbjct: 2   DEAEMME--PELIKALFEQGLMGIETSTDHGGAGSSFMSAIIAIEELAKVDPSVSVMCDV 59

Query: 155 SVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             T   +++    T      W P++                S      L+E   G+D  A
Sbjct: 60  HNTLVNTVIRTYGTQEQQDKWLPQLAE--------------SKLGSFCLSEPASGSDAFA 105

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCY 272
           + ++  K  D         W  +S  ++ F++ A V     G   +   +      G+  
Sbjct: 106 LQTRAVKDGDHWVLNGSKMWITNSYEAEVFLIFANVISVHNGYKGITCFIATKDM-GIQI 164

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----------IYLDSAI 322
            + + K+G R+++T  +   +        +      V     L            L+   
Sbjct: 165 AKKEQKLGIRASSTCLISLDDLRVPEENIIGKHVLRVCHTAQLLMLYDPQIAIECLNEGR 224

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + LA+     A+ Y  +R   G  +     +    A  A++I AA  L++  A
Sbjct: 225 IGIAAQMLGLAQGAFDKAVPYTYQRTQFGQPVGTFQGLAFQQARAAMEIEAARLLTYNAA 284

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              +E K  + EAA A       K +  ++A  V   A+E  GG G+  E  I +++R+S
Sbjct: 285 RRKEEGKPFAREAAMA-------KLYASEVAQRVSGAAIEWAGGVGFTRETGIEKYWRDS 337

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
              +I  G+ N  +  +  L++K
Sbjct: 338 KIGAIYEGTSNIQLQTIAKLIQK 360


>gi|33600412|ref|NP_887972.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33568011|emb|CAE31924.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 418

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 130/376 (34%), Gaps = 33/376 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
             +  PA  A +      GL  +     +             AR           +MS  
Sbjct: 69  HEKTDPAIFAEMG---ELGLLGATIPTEYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQ 125

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E+                 GLTE   G+D   +
Sbjct: 126 SSLVMVPINEFGSEAQKRKYLPKLAAGEW-------------IGCFGLTEPNHGSDPGGM 172

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  DG        W  +SP++D F++ A+  G      +   + +    GL    
Sbjct: 173 ETRATKTPDGYKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKIRGFILEKGMKGLSAPA 232

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +  K+G R++ T E+         + +  +  G          L+SA   ++   +  AE
Sbjct: 233 IHGKVGLRASITGEIVMDEV---EVSEEQMMPGVSGLKGPFTCLNSARYGIAWGALGAAE 289

Query: 335 AIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A  +  R     R   G  L    ++++ +AD+  +I        RL    DE  +    
Sbjct: 290 ACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA---- 345

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ + 
Sbjct: 346 ---AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDV 402

Query: 450 MVLDVLNLLEKGTNLF 465
             L +L   + G   F
Sbjct: 403 HAL-ILGRAQTGLQAF 417


>gi|254386831|ref|ZP_05002120.1| long-chain-acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345665|gb|EDX26631.1| long-chain-acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 380

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 134/390 (34%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +       D +    AW A    +   GL        +         
Sbjct: 19  AFLAKEVLPHYEQW-----EKDGIVSREAWLA----AGRQGLLGLAVPEEYGGGGNADFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +    A  +  A      +   +      +  + T    + W P   S E          
Sbjct: 70  YAAVIAEEFTRAGAAGLAIGLHNDIIGPYLTSLATEEQKRRWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
                  + +TE   G+D+  I +  +   D  + L+G K F+S+ + +D  I++A+   
Sbjct: 120 ---TITAIAMTEPGAGSDLQGIRTTAEDRGDH-WVLNGSKTFISNGILADLVIVVAKTTP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G   +  L+ +    G    R  +KIG +S  T EL F +       LLG+LN +   
Sbjct: 176 EGGAHGLSLLVVERGAEGFERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGELNGAFVH 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        +  A+  ++     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 236 LMTNLAQERMGIAMAGIAAAEYLLEITTRYVKEREAFGRPLSKLQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                       D   +         + A + K+W  ++   V    ++  GG GY+ E 
Sbjct: 296 TRTF-------LDRCITDHSNGELDHVHASMAKWWATELQKRVADRCLQLHGGYGYMAEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AR + +    +I  G+   M   +   L
Sbjct: 349 QVARAFVDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|331014532|gb|EGH94588.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 600

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 92/505 (18%), Positives = 176/505 (34%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            +    P     +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYEH--------GEAILIPEVKPAVDAFIAAGFLNASRDFHAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++                 S E+      PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFG-------------SDEHKQRFLQPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHLVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         A+ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYALDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R        ++ 
Sbjct: 336 SAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +   + + ++ + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTALKQLLRLIANTCERAQAHESLVKLRQPLEQLVARLQAVTLGLLGDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKAFGHTVIGWRWLE 540


>gi|262369599|ref|ZP_06062927.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315667|gb|EEY96706.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 380

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 132/380 (34%), Gaps = 29/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  E+W++    P   ++      +G  C      +        + +        A
Sbjct: 21  EHIAPHYEQWEREGLMP--RSVWNALGENGFLCVDVPEEYGGYGVPTHYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ S E             V   +G+
Sbjct: 79  GFSALSTGISCHSEIAAPYILHIGTEAQKQYWLPKMVSGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ A+ S      +  Y L+G K F+S+      ++LA + + +     V  +
Sbjct: 126 TEPGAGSDLQAMRSNAILQGEH-YILNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLM 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D   +G       +KIG  S  T EL + N       LLG        +         
Sbjct: 185 LVDTHLDGFKKGTNLDKIGLHSQDTSELFYDNVKVPKDQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R S+   I Y + R   G  +      +  +A   +D  A  A   +   
Sbjct: 245 AIAATAIGAIRGSIDVTIQYVKERQAFGQHISQFQNTRFVLAQAKIDEQATAAFYNQNVE 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + + K   E AA         K +   M   V    ++  GG GY+ E  I+R + ++ 
Sbjct: 305 LYMQGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMSEYPISRFFVDAR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   L
Sbjct: 358 IQRIYGGTNEIMKEIVARSL 377


>gi|297204595|ref|ZP_06921992.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710663|gb|EDY54697.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 385

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 131/374 (35%), Gaps = 30/374 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHL 151
             D+ +  PA   +   +   GL        +  +      + +    L           
Sbjct: 27  EIDEKDEMPA--DIREAAKKMGLFGFALPEEYGGLGLSMYEEAQLMFELGYTTPSLRSMF 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +  +  ++ +  T     +W P+I S               V     LTE   G+D 
Sbjct: 85  GTNNGIAGHVLMVGGTEEQKAEWLPRIASG-------------DVLASFALTEPEAGSDP 131

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
           + +T++     D        ++  ++P++D F++ A+ +        +   L      GL
Sbjct: 132 STLTTRAHLDGDDWVINGAKRYITNAPLADVFMVFARTDPDAPRTRGISTFLVPAGTPGL 191

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMR 329
                 +K+G     T ++ F +        +    G        +  +    + +S + 
Sbjct: 192 TVAPKDHKMGQFGAWTADVYFDDVRVPASALVGGDAGLNRGFSTAMGCIAHGRVHISALM 251

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +AE     ++ YA  R  SG ++    +++  IAD   D  A  A     A  FD   
Sbjct: 252 VGMAERLVDESVAYASTRKQSGKLIGSFQLVQGLIADSQTDYYAGRATVLEAARGFDAGT 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                    +I    TKY+  +M   V   A++  GG+GY+   ++ R YR++    I  
Sbjct: 312 DT-------KIGPSCTKYFASEMVWRVADRAVQVHGGAGYMRGVAVERFYRDARLFRIYE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 365 GTSQVQQVIIAKAL 378


>gi|21225080|ref|NP_630859.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|4539191|emb|CAB39720.1| probable acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 382

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 133/390 (34%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +   G    +V +          +   GL     D+ +         
Sbjct: 21  AFLAKEVAPHHQRWERNGVVDREVWYS---------AGRQGLLGPAVDQEYGGGGSDDFR 71

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +       +  A      L   +      +  + T    + W P   S            
Sbjct: 72  YSAVLIEEFARAGASGLALSLHNDIVGPYLTRLATEEQKRRWLPGFVSG----------- 120

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
              +   + +TE   G+D+  I +      D  Y L+G K F+S+ + +D  +++A+   
Sbjct: 121 --DIVTAIAMTEPGAGSDLQGIRTTATDRGDH-YLLNGSKTFISNGILADLVVVVARTTP 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G      L+ +   +G    R   KIG ++  T EL F++       LLG+ N +   
Sbjct: 178 EGGSAGQSLLVVERGADGFERGRNLAKIGQQAQDTAELFFNDVHVPKENLLGEENRAFTY 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+ + +     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 238 LMGNLAQERLAIAVGAAAATEEILDITTRYVKEREAFGRPLAKLQHVRFEIAEMATEAAV 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                       D   +         + A + K+W  ++   V+   ++  GG GY+ E 
Sbjct: 298 TRTF-------LDRCVTEHVAGRLDPVHASMAKWWATELQKRVVDRCLQLHGGYGYMSEY 350

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AR + +    +I  G+   M   +   L
Sbjct: 351 RVARAFLDGRIQTIYGGTTEIMKEIIGRSL 380


>gi|226287271|gb|EEH42784.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 618

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 124/544 (22%), Positives = 210/544 (38%), Gaps = 81/544 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q P  I    Y  D+ L  +I+       PS++ K+L      VLS +  
Sbjct: 2   EPSSATKGFFQTPPTIPP-QYVEDAALRRIISLHLPSPTPSIIDKDLSRFSRLVLSRSHL 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G   + D +     W  L    I +G     +D +      
Sbjct: 61  AHVADAEKNQPYLRPLTTFGVENKQDPLVTSEGWRKLQDIGIEEGFVALGYDDAPGNPAS 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS--------- 180
              +++         Q    H+ + S       AL+T P    D A K+           
Sbjct: 121 HWNNRVY--------QSIKQHIWTSS------AALVTCPGAMTDGAAKLLGAHLNDKDGD 166

Query: 181 --REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
             RE      +   + +   G  +TE++GG+D+    + G+K+S                
Sbjct: 167 IFREARNRLISRDPRFAWTSGQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNP 226

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P R    G        NG+  Q
Sbjct: 227 LGPWQLDGFKWFSSATDANMTIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQ 286

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +    + I +V G   +LA
Sbjct: 287 RLKNKLGTKTLPTAELELKGMRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALA 346

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--------- 384
            +  YAR R   G +L D P   RA+A   +   A   L+F +A+    ++         
Sbjct: 347 ISRAYARVRVSGGRLLTDIPAHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLA 406

Query: 385 --------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
                      + +A  R++ P+ K      A   +   ME +GG GY+E      ++AR
Sbjct: 407 TRASILPTDAQQASALLRLLTPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVAR 466

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R++   SI  G+ + M  D + +++  KG  +   +   +   L  + K       + 
Sbjct: 467 IFRDTCVVSIWEGTTDIMADDFVRVIKSRKGPEILTDVGQWVASALAIANKHSFQKEGEK 526

Query: 491 ISLC 494
           +   
Sbjct: 527 LQKA 530


>gi|77464317|ref|YP_353821.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77388735|gb|ABA79920.1| probable acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 562

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 178/486 (36%), Gaps = 44/486 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           A    F     + +E +              L R  + +  +L      G     V   P
Sbjct: 24  AATERFAEATPETVEAILAEAGKLCEEVLAPLQRPGDLHPARLE----NGV----VRTSP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R     G            +    A       +   A L        +      
Sbjct: 76  GYAEGYRAIADGGWVGIAASPEHGGMGLPMAVTTAVNEMMSSACLSLQLNPLLTQGQIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ ++ + +
Sbjct: 136 LEHHASDALKALYLPKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPL 182

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----G 265
            DG Y ++G K +++   +D       ++LA++         +  FLVP+ L D     G
Sbjct: 183 EDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPG 242

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +    L+ K+G   + T  +++    G+L+G  +     +  M     L   +  V
Sbjct: 243 PRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGV 302

Query: 326 SGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                +   A+ YA  R   G G +I+   ++R +A +  +  +A A++   A + D  +
Sbjct: 303 GVAEAATQAAVAYAMERRQGGPGGIIEHADVRRMLAVMKAETFSARAIALACAVALDMGR 362

Query: 385 SR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +    E  A A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I
Sbjct: 363 ATGQPEWQARAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAI 422

Query: 443 LLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
             G+     +D++   +  G     +L   +E    ++  ++  +  D  +  +  +   
Sbjct: 423 YEGTNGIQAMDLVGRKMMDGGEAAFRLLQEIEDAAETARHRLPDLANDVWAASEALREAT 482

Query: 502 RFLTEK 507
             L  +
Sbjct: 483 ETLVGQ 488


>gi|85710019|ref|ZP_01041084.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688729|gb|EAQ28733.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 401

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 127/370 (34%), Gaps = 32/370 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV-TSASMVA 163
            ++      GL        +           R   +   A      + S +V   AS + 
Sbjct: 51  EIVDEMREMGLFGLSVPEEYGGAGLNMTQYARIVNIMAYAAPAYRSIFSINVGMFASALK 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W PK+                      GLTE   G+D AA+ +      D
Sbjct: 111 NGATEAQRAEWYPKLVEG--------------KIACFGLTEPGSGSDSAAMATTATPDPD 156

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G         ++  ++P +D  +++A+ E         V   L      G+       K+
Sbjct: 157 GNGWVLNGTKRYITNAPHADVALIMARTEKEALPKNAHVSAFLVPMDTPGISTGSPDKKM 216

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAE 334
           G  ++   ++   +        L   TG       +  LD+  +SV        R +L  
Sbjct: 217 GQSASHISDIMLDDVKVPGDALLGGETGKGFRF-AMQSLDNGRISVGAAATGYARRALDS 275

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YA  R   G  +    +++  +AD  ++I AA A+   +    D  ++   +AA   
Sbjct: 276 AVRYANERKAFGEPIARFQLIQAMLADSEIEIYAAEAMMADVTARADRGENILVKAA--- 332

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  +M   V+   ++  GG+GY+ E    R YR++    I  G+   + L +
Sbjct: 333 ----AFKVFASEMCGRVVDRVVQVYGGAGYLAEYDAERFYRDARIYRIYEGTTQILQLQI 388

Query: 455 LNLLEKGTNL 464
              + +    
Sbjct: 389 AKHMLREWEA 398


>gi|170724225|ref|YP_001751913.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169762228|gb|ACA75544.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 393

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAYQFAQD-KLAPRVLEAFR-------HEQTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGSMITRARKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AEA  +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|111019727|ref|YP_702699.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819257|gb|ABG94541.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 598

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 100/552 (18%), Positives = 190/552 (34%), Gaps = 73/552 (13%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH----AYGPGGER 93
             D LL   +        K      +          A +A+ +    +    A  P    
Sbjct: 9   DLDFLLYEWLDVVALTSRKRFAEHSKDTFDAVLDLSADLAHKHFATHNKKADANEPTMRP 68

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
              VE  P     L      GL    +D S   +         A   +  A +       
Sbjct: 69  DGTVEMIPEVKTALDAYAAAGLIAGSFDESVGGMQLPTTVARAAMAWFQAANVSTSGYPF 128

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++ +A+++A   T +   D+   +    +  T             + L+E + G+ +A 
Sbjct: 129 LTIANANLLAEYGTEQQIDDYVRPMLEGRWFGT-------------MCLSEPQAGSSLAD 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL 262
           IT++     DG Y ++G K ++S    +       ++LA+  G       +  F+VP+ L
Sbjct: 176 ITTRAVPQDDGSYRVTGTKMWISGGDHELTENIVHLVLAKTPGGGPGVKGISLFIVPKYL 235

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307
                  G  N +    L +K+GNR      L F +            GFL+G+ +    
Sbjct: 236 PGADGGLGERNDVTLVGLNHKMGNRGTTNTLLAFGDGTHTPAGDAGAVGFLVGEEHRGLS 295

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMK 356
            +  M     +    ++++   V   +++ YAR R                 +ID   ++
Sbjct: 296 YMFHMMNEARIGVGFVAIALGYVGYRKSLDYARVRTQGRPLGAKDPAAPPVPIIDHADVR 355

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPA 410
           R +      +  A  L    +   DE  +  + A          ++ PI K W  +    
Sbjct: 356 RMLLAQKSYVEGALVLGLYCSRLVDEQDTALDAATGDQATLLLDVLTPIAKSWPSQWCLE 415

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470
             + A++  GG GY  +  + ++YR++  N I  G+     LD+L    K T        
Sbjct: 416 ANSLAIQVHGGYGYTRDYDVEQYYRDNRLNPIHEGTHGIQGLDLLG--RKVTMQDGAGLR 473

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE-----------KIALASSAAALYR 519
            L   + ++  +  ++  D+         +   + +             ALA+S+  L  
Sbjct: 474 LLGSKIAATVARARSLGGDATGYADTLDTVWNRIVDITAALWAAGDATTALANSSVYLEA 533

Query: 520 AGMNDIADVFLE 531
            G   IA ++LE
Sbjct: 534 FGHTVIAWMWLE 545


>gi|302342985|ref|YP_003807514.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301639598|gb|ADK84920.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 606

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 85/489 (17%), Positives = 178/489 (36%), Gaps = 63/489 (12%)

Query: 33  GMNAY-SSDSLLVALIANFPSVVHKEL--ELLGEYVLSCTA---QELARMANYN-TPQLH 85
           G+N +   D  +  ++  +   + K L  E   E+ L   A    E  ++A     P   
Sbjct: 2   GLNFFNRDDRDMRFVLFEWLD-MEKVLGYEKFSEFALDDFAMMFDEAYKIARDFIGPTFK 60

Query: 86  AYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                G +++  +V   P++H   +    +G         +                +  
Sbjct: 61  DGDEIGVKYEGGQVTVPPSFHEAFKAMAENGWIGLASPPEYGGQGMPAVVSGVINEFFNA 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A       +   V+++ ++    T +  + +  ++ + E+  T             + LT
Sbjct: 121 AHFAFMTYVGLLVSNSGVIVNYGTDKDKEMFVERMITGEFGGT-------------MCLT 167

Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA-----FIMLAQVEGR-V 253
           E   G+D+  + ++     D      Y + G K F++    D       ++LA++EG   
Sbjct: 168 EPDAGSDVGDLLTKATPDPDAGDPRIYKIEGSKRFITCGRHDMVDVIIHLVLARIEGAPK 227

Query: 254 GCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
           G   +   +            G  N +    +++K+G   +AT  L F       G LLG
Sbjct: 228 GTKGISLFIVPTKWVNEDGSIGEDNDVFCTGIEHKMGIHGSATCSLSFGENGKCRGILLG 287

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------GGILID 351
           + N     +  M     +   + + +    +   A+ YA+ R               +I 
Sbjct: 288 EPNSGMAKMFQMMNEARIGCGVQANAAAAAAYDAALQYAKERVQGPPFVDRSKPRVPIIQ 347

Query: 352 QPVMKRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              ++R + ++     AA A+         +A++  + + R      + +M P+ K +  
Sbjct: 348 HEDVRRMLMNLKAGTEAARAMIAYNFWMVDVAHNDPDPEVRKAMGMRSELMTPLLKSYIT 407

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
            M   +  +AM+ +GG GY  E  I +HYR+    SI  G+     LD++   L   G +
Sbjct: 408 DMGAQLCRDAMQILGGVGYCAEFPIEQHYRDIKILSIWEGTNFIQSLDLVGRKLAMAGGS 467

Query: 464 LFEQLFSTL 472
           +++     +
Sbjct: 468 VYQNFLKEI 476


>gi|120402485|ref|YP_952314.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955303|gb|ABM12308.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 380

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 134/401 (33%), Gaps = 29/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + +  A+EL  +A        A  P  ++ +K E +P    +       GL    +  
Sbjct: 5   RLLPTDEARELVDLARQIAD--KALDPIVDQHEKDETYPDG--VFATLGEAGLLSLPYPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +    +     ++               +S    S   +    T    + W P++    
Sbjct: 61  EWGGGGQPYEVYLQVLEELAARWAAVAVAVSVHSLSCHPLMSFGTDEQRQRWLPEMLGG- 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       S      L+E + G+D AA+T +      G        W     ++D 
Sbjct: 120 ------------STIGAYSLSEPQAGSDAAALTCKAVAADGGYRINGAKAWITHGGIADF 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
           + + A+     G   +   L      GL + + + K+G  +  T    + N F      +
Sbjct: 168 YNLFART--GEGSQGISCFLVPRDTEGLTFGKPEEKMGLHAVPTTAAHYENAFVEADRRI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++V   + +L  A+ Y++ R   G  +ID   +   +
Sbjct: 226 GAEGQGLQIAFSALDSGRLGIAAVAVGLAQAALDAAVDYSQERTTFGRKIIDHQGLAFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  + AA A     A   D     S         A + K      A  V  +A++  
Sbjct: 286 ADMAAAVDAARATYLDAARRRDAGLPYSR-------HASVAKLTATDAAMKVTTDAVQVF 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG+GY  +  + R+ RE+    I  G+     L +   L +
Sbjct: 339 GGAGYTRDYRVERYMREAKITQIFEGTNQIQRLVISRHLAR 379


>gi|240168426|ref|ZP_04747085.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium kansasii ATCC 12478]
          Length = 388

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 134/367 (36%), Gaps = 31/367 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G+        +          ++  +      +     M      
Sbjct: 40  YPEAWIEQMKR---IGIFGLAVSEEYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 96

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T      + P + + E   T             + LTE  GG+D+ ++++  
Sbjct: 97  AKLLTLFGTEEQKTAYLPAMATGELRAT-------------MALTEPGGGSDLQSMSTTA 143

Query: 219 -QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRL 275
               + G+       W  ++  S    +L + +   R     +  +L    P GL   R 
Sbjct: 144 LVSEAGGLRINGAKTWITNARRSGLIALLCKTDPAARPRHKGISIVLVQPGP-GLTVSRD 202

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +   + EL F +    +   L   +  G  + MK L    +  A  ++     +
Sbjct: 203 LPKLGYKGVESCELSFDDYRVPVSAVLGSRMGEGFSQMMKGLETGRIQVAARALGVATAA 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    EA 
Sbjct: 263 LEDALAYAQQRESFGQPIWKHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAG 322

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 323 MA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 375

Query: 452 LDVLNLL 458
             +   L
Sbjct: 376 NVIAGQL 382


>gi|221640200|ref|YP_002526462.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221160981|gb|ACM01961.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 562

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 178/486 (36%), Gaps = 44/486 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           A    F     + +E +              L R  + +  +L      G     V   P
Sbjct: 24  AATERFAEATPETVEAILAEAGKLCEEVLAPLQRPGDLHPARLE----NGV----VRTSP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R     G            +    A       +   A L        +      
Sbjct: 76  GYAEGYRAIADGGWVGIAASPEHGGMGLPMAVTTAVNEMMSSACLSLQLNPLLTQGQIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ ++ + +
Sbjct: 136 LEHHASDALKALYLPKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPL 182

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----G 265
            DG Y ++G K +++   +D       ++LA++         +  FLVP+ L D     G
Sbjct: 183 EDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPG 242

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +    L+ K+G   + T  +++    G+L+G  +     +  M     L   +  V
Sbjct: 243 PRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGV 302

Query: 326 SGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                +   A+ YA  R   G G +I+   ++R +A +  +  +A A++   A + D  +
Sbjct: 303 GVAEAATQAAVAYAIERRQGGPGGIIEHADVRRMLAVMKAETFSARAIALACAVALDMGR 362

Query: 385 SR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +    E  A A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I
Sbjct: 363 ATGQPEWQARAAVLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAI 422

Query: 443 LLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
             G+     +D++   +  G     +L   +E    ++  ++  +  D  +  +  +   
Sbjct: 423 YEGTNGIQAMDLVGRKMMDGGEAAFRLLQEIEDAAETARHRLPDLANDVWAASEALREAT 482

Query: 502 RFLTEK 507
             L  +
Sbjct: 483 ETLVGQ 488


>gi|17570075|ref|NP_510789.1| Acyl CoA DeHydrogenase family member (acdh-7) [Caenorhabditis
           elegans]
 gi|3805665|gb|AAC69025.1| Acyl coa dehydrogenase protein 7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 412

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 49/361 (13%), Positives = 118/361 (32%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +++++   G   +    ++  +          +             +  +  + + + 
Sbjct: 62  WEIIKKAHAQGYLIADIPEAYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLI 121

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L     + K +  ++    +                  +TE   G+D+A + ++ +K  D
Sbjct: 122 LCANDDIKKRFLGRMIDNPF-------------VASYAVTEPGAGSDVAGVKTKCEKKGD 168

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIG 280
                    W  ++  ++ F +LA+ +              + +G   GL   R +  +G
Sbjct: 169 EYILNGSKMWITNAGHANWFFVLARSDPDPKTAAGKAFTAFVVEGDTPGLTRGRKEINMG 228

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            R + T  + F +        +     G    MK         A ++       L  A  
Sbjct: 229 QRCSDTRGITFEDVRVPAANVVGAPGEGFKVAMKTFDKTRPTVAALATGVAYRCLDVATQ 288

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y+  R   G  + +   +   +A++A++   A  ++++     D  +  S         A
Sbjct: 289 YSLERKAFGTQIANHQGVSFLLAEMAINCELARLMTYKSGAEVDAGRPGS-------YYA 341

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +    A      A++  GG+G+  E    +  R++    I  G+     + +   
Sbjct: 342 SIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYEGTSQIQRMVIARQ 401

Query: 458 L 458
           L
Sbjct: 402 L 402


>gi|324999871|ref|ZP_08120983.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 386

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 122/359 (33%), Gaps = 29/359 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
            +    GL       S+  +         A              +   V   +M  L   
Sbjct: 47  AKMGAMGLFGLPVPESYGGMGGDYYALCLALEELARVDSSVSITVEAGVGLGAMPILRFG 106

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      W P +                      GLTE  GG+D  A  +   ++ DG +
Sbjct: 107 TEEQKARWLPDL-------------AAGRALGAFGLTEPGGGSDAGATRTTA-RLEDGEW 152

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            ++G K F+++  +D   ++       E   G   +  +L      G       +K+G  
Sbjct: 153 VINGSKCFITNSGTDITSVVTVTAVTGEKPDGGKEISAILVPAGTPGFTVGGKYSKVGWN 212

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            + T EL F +        L     G  + + IL    +  A +SV   +  + E++ YA
Sbjct: 213 CSDTRELFFDDVRVPEANLLGERGRGYAQFLSILDEGRVAIAALSVGLAQGCVDESVRYA 272

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  IA++   +  A       A    + +   +EAA A+++A  
Sbjct: 273 GEREAFGRTIGGYQAIQFKIAEMEARVHTARLAWQHAARLLVDGEPFKKEAAIAKLVASN 332

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                   A     +A +  GG G++ E  + R YR++    I  G+     L +   L
Sbjct: 333 A-------AMDNARDATQVFGGYGFMNEYPVGRFYRDAKILEIGEGTSEVQKLLIARHL 384


>gi|323450302|gb|EGB06184.1| hypothetical protein AURANDRAFT_29630 [Aureococcus anophagefferens]
          Length = 425

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 137/440 (31%), Gaps = 39/440 (8%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-------GPGGERW 94
               L+A       + L  L E                   QL A         P     
Sbjct: 6   AARQLVARAAPRASRTLSALPEDAEGHGGVSFELTDEQKAFQLMARQVAKEVIAPAAAEL 65

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P    +       GL  +    ++  +                        +  
Sbjct: 66  DRTMAFPD--EIFNELWEMGLVNAHIPEAYGGIGLHTLDGCVIQEELAWGCSGVSTAVEA 123

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +   V L    R  K++  ++              +  +    G++E   G+D+A I
Sbjct: 124 NTLAQMPVILAGDERQKKEYLGRMT-------------EAPLKCAYGVSEAGAGSDVAGI 170

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS------DAFIMLAQVEGRVGCFL-VPRLLEDGSP 267
            ++  +  D         W  +  ++        + +LA  +        +   + D + 
Sbjct: 171 QTRAVRKGDDYVINGSKLWITNGGVAQSSGDGGWYFVLAVTDPDASVGRKMTGFVVDANT 230

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+        +G R + T  L F +        L     G    M          A  +
Sbjct: 231 PGIDVGDKLVNMGQRCSDTRPLFFEDVVVPAANVLGSEGAGFKIAMGAFDNTRPPVAAGA 290

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +  EA+ YA+ R   G  +     +   +AD+A  I AA  L+ + A   D   
Sbjct: 291 VGVARRATDEALAYAKERKTMGSPIAGHQSIAFMLADMATGIEAARLLTHKSAALIDSGV 350

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S +       ++A + K +  +    V+++A++  GG+G+  E  + +  R++    +  
Sbjct: 351 SNT-------MVASMAKAFAAEHCNKVVSDAVQIFGGAGFNTEYPVEKLMRDAKIYQLYE 403

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+     L +   +    NL
Sbjct: 404 GTTQIQKLIISRHILNMDNL 423


>gi|159036333|ref|YP_001535586.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915168|gb|ABV96595.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 400

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 124/390 (31%), Gaps = 36/390 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R +  + +PA   +L      GL        +  +                  +  
Sbjct: 31  PHAQRLEHADEYPA--DILDGMREMGLFGLTIAEEYGGLGESLLTYALVVEELSRGWMSI 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A +++   +        P++ + E             V     ++E   G
Sbjct: 89  SGIVNTHFIVAYLISQHGSVEQRARLLPRMATGE-------------VRGAFSMSEPECG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRL 261
           +D++AI S+  +            W  +   +     L + +       G +  FLV + 
Sbjct: 136 SDVSAIKSRAVRDGADFVLNGQKMWLTNGAYASVVATLVKTDTGADSVYGNMSTFLVEKE 195

Query: 262 LEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316
              G    GL       K+G +   T E+            L            ++    
Sbjct: 196 PGFGETAPGLTIPAKIEKMGYKGVETTEMILDGVTVPASAVLGGEGQVGRGFYQMMDGIE 255

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++ A  +      +   A  YA++R   G  L     +   +A++   I AA AL  
Sbjct: 256 VGRVNVAARACGISIRAFELAAAYAQQRRTFGQPLAKHQAVAFKLAEMGTKIEAAHALMV 315

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +    EA  A+++A        +    V+ EA    GG GY +E  I R  
Sbjct: 316 NAARLKDAGQRNDVEAGMAKLLA-------SEYCAEVVQEAFRIHGGYGYSKEYEIERLM 368

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           RE+P   I  G+       +   L K   L
Sbjct: 369 REAPFLLIGEGTSEIQKTIISRGLLKEYRL 398


>gi|319760924|ref|YP_004124861.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822828|ref|YP_004386131.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115485|gb|ADU97973.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308200|gb|AEB82615.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 382

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 144/369 (39%), Gaps = 28/369 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLM 152
           WD+    P    L R++   GL    +  ++  V     H++                 +
Sbjct: 36  WDEAGGFP--RDLYRKAAEAGLLQLGFPEAYGGVECDAFHRMILFEERAWGGSGGVASGL 93

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A  +A+  +  +     P I + E                 L +TE  GG+D+A
Sbjct: 94  FSHTIGAPPIAVAGSEALKARVLPGILAGEQ-------------ISALAITEPGGGSDVA 140

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  ++   G Y ++G K F++S M   +  +A   G  G   V  LL  G   GL  
Sbjct: 141 QLATTARRDG-GHYVVNGSKLFITSGMRADWFTVAVRTGGPGAAGVSLLLVPGDTPGLTR 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             L  K+G  ++ T E+ F++       LLGD       +        L  A  +    +
Sbjct: 200 SPL-QKMGWWASDTAEIGFTDCRVPVENLLGDEGQGFAILMRNFNHERLALAAAACGYAQ 258

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           V L +A+ +AR R   G  L ++ V++  + D+A  I A  AL   LA+  D  +S + +
Sbjct: 259 VCLHDAVAWARERRTFGQPLSERQVIRHRLVDMATRIEATRALLDDLASRLDAGESPAAQ 318

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A A+  A  T  +C   A       ++ +GG G++    + R YRE     I  G+   
Sbjct: 319 IAMAKNFATRTFQFCADAA-------VQILGGMGFMRGTRVERLYREVKVMMIGGGAEEV 371

Query: 450 MVLDVLNLL 458
           M   +   L
Sbjct: 372 MKDLIAKRL 380


>gi|289676303|ref|ZP_06497193.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5]
          Length = 600

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 85/504 (16%), Positives = 173/504 (34%), Gaps = 68/504 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+           D+    P     +   +  G   +  D     +       
Sbjct: 58  RKADENEPRYEN--------DEAILIPEVKPAIDAFLEAGFLNASRDFDAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFADDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHMVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPAGVKGISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G  +     +  M     +   + +          ++ YAR R             
Sbjct: 277 GYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARERPQGRLPDSKSPDS 336

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I+   ++R +      +  A  L    +  FD+         R        ++ P
Sbjct: 337 KPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDRKHAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +        A++ +GG GY  E  + ++YR++  N+I  G+     LD+L   
Sbjct: 397 VVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA----- 509
           L + G    +QL   +    +   + + +  + +    L    + +   L   +A     
Sbjct: 457 LAQNGGTGLKQLLRLISATCERAQAHQTLDELCQPLQQLVARVQAVTLGLLTDLAQGRIT 516

Query: 510 --LASSAAALYRAGMNDIADVFLE 531
             LA+SA  L   G   +   +LE
Sbjct: 517 STLANSALYLKAFGHTVVGWRWLE 540


>gi|312066465|ref|XP_003136283.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa]
 gi|307768547|gb|EFO27781.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa]
          Length = 618

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 137/376 (36%), Gaps = 41/376 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ E  P     L +    G   ++    ++          R A +   + L    +M  
Sbjct: 104 DEKEEIPM--DTLSKFAEIGAFGALVPEEYDGAGLNNTQLARVAEVVGESDLSLAVVMGA 161

Query: 155 SVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             +     + L  T    + + P + +                     LTE   G+D  +
Sbjct: 162 HQSIGYKGILLYGTDEQKRKYLPDLATG-------------RKFAAFCLTESGTGSDANS 208

Query: 214 ITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGS 266
           + +  +K SDG       G  W  +   +D F + A+      +G      +   + + S
Sbjct: 209 VQTHAEKSSDGRCYVLNGGKLWISNGSFADVFTVFARTQVKGKDGTPKSK-ISAFIVERS 267

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+     + K+G + + TVE+ F NT   +    N+     E  K+ +  L++    +
Sbjct: 268 HGGVTTSVPEKKMGIKGSKTVEVHFDNTKVPVD---NLLGAEGEGFKLAMNILNNGRFGI 324

Query: 326 -----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                  M+  + + I +   R   G  L +   ++  + D+ L   A  +L + L+ + 
Sbjct: 325 PAVCTGSMKFCIQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLRHYATESLLYMLSGAM 384

Query: 381 DEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D        EAA  +IMA        + A  V   A++  GG GY++E  + R  R+   
Sbjct: 385 DRGIVDYELEAAVGKIMA-------SENAWIVCDRAIQLHGGMGYMKECGLERVMRDLRI 437

Query: 440 NSILLGSGNAMVLDVL 455
             I  G+ + + L V 
Sbjct: 438 FRIFEGANDVLRLFVA 453


>gi|114765271|ref|ZP_01444403.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542406|gb|EAU45434.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 386

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 14/290 (4%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           + F  E       P  K      + +TE   G+D AAI +      D  + L+G K F+S
Sbjct: 100 EQFEGELRDKYLYPTVKGDKICAMAITEPGAGSDAAAIKTNAYLDGDE-WVLNGTKHFIS 158

Query: 237 -SPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
              ++D  I++A  +   G    +  L+ D    G    R +  +G+R     EL F + 
Sbjct: 159 DGDIADYVIVMALTDPEKGARGGISLLIVDKGMPGFTVARNQAMMGHRGYGHAELNFDDV 218

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLD-SAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
               G +LG++      +      I L      +V      L     +A  R   G  + 
Sbjct: 219 RIPKGNVLGEVGNGFKVMMANVGGIRLGHIGARAVGMASRVLDMMREHAATRKQFGQPIG 278

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D  ++++ IAD A++I A   +    A   D      ++ +  ++ A        +M   
Sbjct: 279 DFQMVQQMIADSAMEIFATRMMVLNTAWEVDAGLDPRDKVSMVKVQA-------SEMLGR 331

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G+ +E  + R YR++    I  G+     + +   + K
Sbjct: 332 VADRGIQVFGGYGFTKELPLERIYRDARVTRIYDGTSEVHRMLIARSVIK 381


>gi|284029387|ref|YP_003379318.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283808680|gb|ADB30519.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 388

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 123/379 (32%), Gaps = 30/379 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLE 147
           P    WD+    P     +++    GL        +            A   +  + Q  
Sbjct: 26  PHAAEWDRKHHFPV--ETVQKMGQLGLFGLTAPEQYGGAGGDFTSLCVAIEEISRVDQSM 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +      + +    T    + W P + +                  G GLTE   
Sbjct: 84  GITLEAAVGLGINPILTYGTDEQKQRWLPDLVAG-------------RALAGFGLTEPDS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQV-EGRVGCFLVPRLLED 264
           G+D  A  ++     D        ++  +S   ++    + A+  E   G   +  ++  
Sbjct: 131 GSDAGATRTRAVLDGDEWVIDGSKQFITNSGSSITSVVTVTARTGERADGRPEISTIIVP 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G   +   +K+G  ++ T  L F+         L            L  LD   ++
Sbjct: 191 AGTPGFVAEAQYDKLGWHASDTHPLTFTGCRVPQENLLGRRGKGFAQF--LATLDDGRVA 248

Query: 325 VSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  +        L  ++ YA  R   G  +  +  +   I+D+ +   AA  L +R A  
Sbjct: 249 IGAVALGCIKACLEMSVQYAGERKTFGVPIGQKQGVAFQISDLKVMADAAELLVYRAAAL 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D   S  E     +  A + K +  + A      A +  GG G++EE  + R YR++  
Sbjct: 309 KDSGASVQE----FKQAAAVAKLYATESAVTATRIATQVFGGYGFMEEYPVTRFYRDAKI 364

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 365 LEIGEGTSEVQRMLIARGL 383


>gi|307595745|ref|YP_003902062.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307550946|gb|ADN51011.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 387

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 147/382 (38%), Gaps = 36/382 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D  +++P    L+R     G         +          +      L      
Sbjct: 27  PIARKMDLEDYYP--RDLIRELGKQGFLTPSAPPEYGGPGIDLRGSVVVVE-ELSRYSPT 83

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              ++  V    + AL    + +  ++  PKI S E+                  LTE  
Sbjct: 84  LGFITEIVNDNIVYALLKYGSNKQKEEILPKIASGEW-------------VASYALTEPC 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265
            GTD AAI ++ ++            W      +D +++ A+          +   L   
Sbjct: 131 CGTDAAAIETRAERRGGEWVINGRKIWITQGAYADIYLLFARTGPKEARHRAITAFLVRR 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS 324
             + +   +L+  +G R     E++F++    ++GD +V     E  KI ++ LD A + 
Sbjct: 191 G-DCVEVSKLE-MMGMRGAGEAEVKFNDC---VVGDDDVLGKINEGFKIAMVTLDLARIG 245

Query: 325 VSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +SG+ V L      EA+ +A+ R   G  LID   ++  +AD+   +     ++++ A  
Sbjct: 246 ISGVAVGLSQGVLDEALEWAKTRTAFGKPLIDWEWIQFQLADMKAKLEIGRTVTYKAAWL 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +D             + A I K +  +MA  +  + ++ +GG GY +E    R YR++  
Sbjct: 306 YDNKDPS------FILYASIAKLYTAQMAVEIARDGVQILGGFGYSKESFSERAYRDAKV 359

Query: 440 NSILLGSGNAMVLDVLNLLEKG 461
             I  G+  A  + +  +L +G
Sbjct: 360 LEIAEGTNEAQRIVIHRILARG 381


>gi|258651953|ref|YP_003201109.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258555178|gb|ACV78120.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 396

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 74/387 (19%), Positives = 142/387 (36%), Gaps = 29/387 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +WD+  + P    ++R     GL        F               +  + 
Sbjct: 21  KQIAPHVAQWDRDHYFPV--DVVRSMGELGLFGLTAPEEFGGAGADGDFTALCVAIEELG 78

Query: 145 QLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +++    ++         + +    TP   + W P + +                  G G
Sbjct: 79  RVDQSLGVTLEAGVGLGINPILTFGTPEQQQLWLPDLVAG-------------RTLAGFG 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCF-L 257
           LTE   G+D  A  ++   + DG + ++G K F+++  S       + A+   R G    
Sbjct: 126 LTEPGAGSDAGATRTKADLV-DGEWIINGAKQFITNSGSSITSLVTVTARTGERTGGRPE 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
           +  ++      G   +   +K+G   + T  L F +        L     G  + + IL 
Sbjct: 185 ISTVIVPAGTPGFLVEPAYHKLGWHISDTHPLTFIDCRVPESNLLGERGRGYAQFLSILD 244

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A ++V  ++  +   + YA  RH  GG +  +  +   IAD+ + + A+ AL++
Sbjct: 245 DGRVAIAALAVGLIQACVDLCVQYATDRHTMGGPIGRKQGVAFPIADLEVMLHASRALTY 304

Query: 375 RLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           R A   D        +   A  +  A + K +  + A      A +  GG G++EE  +A
Sbjct: 305 RAAAMKDAMLAGHPGAPTVARFKHAAAVAKLYSSESAVTATRIATQVFGGYGFMEEYPVA 364

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR++    I  G+     L +   L
Sbjct: 365 RFYRDAKILEIGEGTSEVQRLLIARGL 391


>gi|226308382|ref|YP_002768342.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187499|dbj|BAH35603.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 137/375 (36%), Gaps = 33/375 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH-- 150
            W++    P      R+    G+        +     + + K +AA     A+       
Sbjct: 31  DWEREGMVP--RDFYRQLGKLGVLGMTVPVQYGG-AGETSFKFQAALTEETARAAVSFGA 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +    T    + W P   S +                 + +TE   G+D
Sbjct: 88  FGVHTGLVLPYILTYGTEEQKQRWLPDFISGDMM-------------TAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDG 265
           +A I +  ++  DG  Y L+G K F++  + +D  +++ +            +  L  D 
Sbjct: 135 LAGIKTTAKRSEDGTHYVLNGAKTFITGGVQADRVLVICRTSPPTAENRRAGLSILAVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           S  G    R   KIG R++ T EL F++       LLG+   + G + +      L  A+
Sbjct: 195 SSEGYEVGRKLEKIGMRTSDTAELSFTDVRVPAEDLLGEEGAAFGYLANNLPQERLMIAV 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +    ++  A  Y R R V G  + +    K  IA+    + AA  +  R     + 
Sbjct: 255 TQTAAAVGAIEFASAYVRDRKVFGQAVAEFQNTKFVIAECIAKVEAAQCMVDRALELHET 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +AA A       K +C + A  VI + ++  GG GY+ E  IAR Y ++  + I
Sbjct: 315 GDLSVADAAKA-------KLFCTETAAEVIDKCLQLHGGYGYMLEYPIARLYADTRVSRI 367

Query: 443 LLGSGNAMVLDVLNL 457
             G+   M   +   
Sbjct: 368 YGGTNEVMKTIIAKA 382


>gi|260185079|ref|ZP_05762553.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
 gi|289445747|ref|ZP_06435491.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
 gi|289418705|gb|EFD15906.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis CPHL_A]
          Length = 388

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 134/370 (36%), Gaps = 34/370 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++    T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTRFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+  
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMILGEGTNE 372

Query: 449 AMVLDVLNLL 458
                +   L
Sbjct: 373 IQRNVIAGQL 382


>gi|297561734|ref|YP_003680708.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846182|gb|ADH68202.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 385

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 126/364 (34%), Gaps = 24/364 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R     GL    +   +    +     ++         L  G  +S    S   +A
Sbjct: 42  REVFRVLGGAGLLGLPYPGRYGGGDQPYEVYLQVVEELARGWLAVGLGVSVHTLSCYPLA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +              +   M    +     L+E   G+D +A+T++ +   D
Sbjct: 102 TFGSDAQREA-------------HLPGMLGGGLLGAYCLSEAASGSDASALTTRAEADGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G        W      +D + + A+      G   +          GL     + K+G  
Sbjct: 149 GYRVNGAKAWITHGGQADYYTLFARTGAPDSGARGISCFHVPADTPGLGSAAPERKMGMN 208

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S+ T  +   +       L+G+ +   G          L  A  +V   + +L  A+ Y+
Sbjct: 209 SSITAGVLLDDVRLGADALVGERDRGFGIALSALDSGRLGIAACAVGLAQAALDAAVDYS 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R RH  G  + D   +   +AD+A  +AA+  L    A   D      ++AA A+++A  
Sbjct: 269 RERHQFGTAIGDFQGVGFMLADMATQVAASRELYLSAARLRDAGLPFGKQAAMAKLLA-- 326

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                   A  V  +A++  GG GY  +  + R+ RE+    I+ G+     + +   L 
Sbjct: 327 -----TDTAMRVTTDAVQVFGGYGYTRDFPVERYMREAKVLQIVEGTNQVQRMVISRHLA 381

Query: 460 KGTN 463
           +   
Sbjct: 382 REGA 385


>gi|295134311|ref|YP_003584987.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294982326|gb|ADF52791.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 602

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 154/437 (35%), Gaps = 35/437 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            +++++   G         ++ +       +        A    A    + +      + 
Sbjct: 68  EIMQKAGELGFLGVAVPEEYDGLGMGFVSTMLVCDYISGATGSIATAFGAHTGIGTMPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + PK+ + E+                  LTE   G+D  +  ++     D
Sbjct: 128 LYGTEEQKKKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSDD 174

Query: 224 GIY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y        W  ++  ++ FI+ A++E      +   ++E+   NG+ +   + K+G 
Sbjct: 175 EKYYSISGQKMWISNAGFANVFIVFARIEDDK--NITGFIVENDKENGISFGEEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ F+ T   +   L           +   +  +  A   +   R     A+ Y
Sbjct: 233 HSSSTRQVFFNETKVPVENMLADRGEGFKIAMNALNVGRIKLAAACLDAQRRVTENAVKY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEAA 391
           A  R      +     +K+ +A++A       + S+R A       +   E+ +   EA 
Sbjct: 293 ANERVQFKTPIAQFGAIKQKLAEMATSAYVGESASYRAAKNIEDRIHLRMESGNSHSEAE 352

Query: 392 Y-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   I   I K  C +       E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 353 LKGVEEYAIECSILKVACSEDIQHCSDEGIQIFGGMGFSADTPMEAAWRDARISRIYEGT 412

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISLCKEDKGLARFLT 505
                +  + +L K             Q +G     + +  + D   L  E+K + + L 
Sbjct: 413 NEINRMLSVGMLVKKAMKGHVDLLGPAQAVGEELMGIPSFDKPDYSELFAEEKEMIKKL- 471

Query: 506 EKIALASSAAALYRAGM 522
           +K+ L  + +A+ + G 
Sbjct: 472 KKVFLMVAGSAVQKFGP 488


>gi|302868235|ref|YP_003836872.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302571094|gb|ADL47296.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 384

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 143/408 (35%), Gaps = 35/408 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
               L+  G +      ++LAR           + P  E  D+ + +P     +R  + +
Sbjct: 5   WEPRLDDEGRHW-----RDLARDVAA-----RHFAPLAEELDREQRYP--WESVRVLVEE 52

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL   + +R                     A    G +++     A+ + L  TP   + 
Sbjct: 53  GLAGLLVEREHGGRGASFVTACAVIEEVSRACPSTGAILTAYALGATPLVLAGTPEQRER 112

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +   +   E              AI   LTE+  G+D A I +  ++   G        +
Sbjct: 113 YLGGLARGE--------------AISFALTEEGAGSDAARIRTTAEREGAGWRLRGEKIY 158

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS- 292
             +   S  +++ A  + + G   +   L D   +G+   R ++K+G R   T  L+   
Sbjct: 159 IGNGGASRYYVVFALTDPQAGTRGITAFLVDKDADGVVIDRYEDKMGIRGTLTSNLKLDT 218

Query: 293 -NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               G +LGDLN              +  A  S+         A   A RR   G  +ID
Sbjct: 219 WVPDGDVLGDLNRGMRLAMQTLSAGRISVAAQSLGVALAGFDVASREAARRETFGRPIID 278

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +AD+A  I AA  ++F  A +  E        A A       K +  ++A   
Sbjct: 279 NQGISFPLADVATGITAARMITFEAARTHQEGGDVGILGAMA-------KLYASEVAHRA 331

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +  A++  GG G+ +     R YR+     I  G+     L +   ++
Sbjct: 332 VDTAVQVFGGDGFCKPCPAERLYRDQRILEIYEGTSEIQRLVLGRAIK 379


>gi|326797463|ref|YP_004315282.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326548227|gb|ADZ76612.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 597

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 79/450 (17%), Positives = 163/450 (36%), Gaps = 47/450 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D  E       LL ++   GL        +    +     +            A  L
Sbjct: 55  ERIDNQEEG-LMQTLLDKAGELGLLGVSIPEEYGGFGKNFNTSMLVTDAVGAGHSFAVAL 113

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +         + + PK+ +  Y                  LTE   G+D 
Sbjct: 114 SAHTGIGTLPILYYGNTEQKQKYIPKLATGAYK-------------AAYCLTEPNAGSDA 160

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  +  +   +G  Y ++G K W  +   +D FI+ A+++       +   + + +  G
Sbjct: 161 NSGRTTAKLNDEGTHYLINGQKMWITNGGFADIFIVFAKIDDDK---NLSAFIVERAFGG 217

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM 328
           +     ++K+G + ++T ++ F++         N+ +      KI +  L+   + +   
Sbjct: 218 ITMNPEEHKLGIKGSSTRQVFFNDCPVP---KENLLSERENGFKIAVNILNIGRIKLGAA 274

Query: 329 RVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +      +++AI+YA  R      +     ++  +A++A    A  + ++R   + D+A
Sbjct: 275 AIGSSRKVISQAINYANERVQFKLPIAKFGAIRYKLAEMATRNFAVESAAYRAGQNIDDA 334

Query: 384 ------------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
                       K++ +      I   I K W  +M   ++ E ++  GG GY  +  + 
Sbjct: 335 YEALVSDGMEPAKAKLKSTEQFAIECAILKVWGSEMLDYIVDEGVQIYGGMGYSADAPME 394

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           R YR+S  N I  G+     L ++++L K       L   L  DL    ++V+  L    
Sbjct: 395 RSYRDSRINRIFEGTNEVNRLLIVDMLLK-----RALKGEL--DLMGPAQEVVGELMAIP 447

Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAG 521
              + +  L  +    IA    A  L    
Sbjct: 448 DFSEPEDVLLAYEKRVIANLKKAGLLVAGA 477


>gi|260905176|ref|ZP_05913498.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 388

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 129/376 (34%), Gaps = 23/376 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLE 147
           P G   D+ +   +   L R +   G+   +    +              +  L      
Sbjct: 29  PAGPGVDEADT-ESPVELFREAARVGITDFMIPEEYGGGGFTDVFTQCLVQEQLCFGDPG 87

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G+L+  +   A  +  + T    + W   +   E   T             L  TE   
Sbjct: 88  IGNLLCSNGFFADPILALGTEEQKETWLRPLTGPEPMFT------------ALATTEPGS 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A+IT++ + +  G        W  ++ +++ +++ A+ +       V   L     
Sbjct: 136 GSDSASITTRAEAVDGGYLLNGQKAWISNAGLAEGYVVFAKTDPAQRSRGVTAFLLPRET 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS- 326
            G+ +     K+G R+    E+ FS+ F      L         +  +   D + + +  
Sbjct: 196 EGMEFGAPMKKMGQRAIVCREIFFSDVFVPTHNRLGEEGRGFYGL--MRTFDISRVVLGA 253

Query: 327 ----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 R +   A  YAR R   G  +I+   +   +AD+A  I AA       A   D 
Sbjct: 254 AALGTARAAYEYARDYARERTQFGKAIIEHQSVAFRLADMAARIDAAWLQVLNAARMIDA 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E   A   A + K    + A       ++ +GG GY  E  + +  R++    I
Sbjct: 314 GDGVEREKVTAS--AAMAKLGASETAMFCTWAGVQTLGGWGYSREHPVEQWMRDAKLEEI 371

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ + M L +   L
Sbjct: 372 EEGTSDIMRLLISRNL 387


>gi|187929703|ref|YP_001900190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187726593|gb|ACD27758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 381

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 149/412 (36%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           + +  E++   E V    A E        TP+L  +   G       + P    + R   
Sbjct: 9   AWMDHEIDAFREQVRRYVAAEF-------TPRLDEWRRQG-------YIP--REVWRPFG 52

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                      ++       A+++       +A+ E    ++    ++  +    T    
Sbjct: 53  GMSFLLPEMPETYGGAGASLAYQLVV--QDELAKAEMPVNIAVHTIASHYILDFGTEAQK 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E                 + +TE   G+D+ AI+++ ++  D  Y + G 
Sbjct: 111 QRWLPKVTNGEM-------------LAAIAMTEPGCGSDLKAISTRARRDGD-YYVIDGA 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  +   +++A      G   V   + E  +  G    RL  KIG +++ T EL 
Sbjct: 157 KTFITNGFTGNLLIVAARTSGAGSKGVSLFVLETENLPGFRVGRLLEKIGMQASDTAELF 216

Query: 291 FSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        L        G +        +  A+ + + +  +L   I Y ++R + G
Sbjct: 217 FDSVRVPADQLLGSVEGQGFGQLMGALPYERMVIAVPAAAVIDRALELTIEYTKQRKIFG 276

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L D    ++ +A++A       +          +    +E A  A+        WC +
Sbjct: 277 APLFDMQTTRQKLAEMATIAHVVRSFVNDCTQRLLDGTLDNEAAYMAKW-------WCTE 329

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ E ++  GG GY+ E  IAR Y  S    I  G+   +   V   L
Sbjct: 330 QQCRVVDECLQLFGGYGYMAEYPIARMYAASRVQKIYGGANEVLKDLVSRKL 381


>gi|256375733|ref|YP_003099393.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255920036|gb|ACU35547.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 135/356 (37%), Gaps = 14/356 (3%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            +R I   +      +    +   + H    A  Y    + A  L + S   AS + +  
Sbjct: 34  EQRGIDRDVWLEAGRQGLLGLEVPEEHGGSGADDYRFNTVFAEELCALSAGVASCLGIHG 93

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              V   +   + + E             +   +G+TE  GG+D+AA+ +   +     +
Sbjct: 94  --DVVGRYLVDLCTEEQKRRWLPRFCSGELVTAIGMTEPSGGSDLAALKTTAVRDGSD-W 150

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+++  S   +++A       G   +     +    G    R  +K+G   + 
Sbjct: 151 VLNGSKTFITNGFSADLVLVAAGTSPDRGARGISLFAVESGTPGFERGRKLDKVGQPESD 210

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL FS+       L+G+++     +        L +A+ +++     L E + Y + R
Sbjct: 211 TAELFFSDVRLPADNLVGEVDRGFAHMMRRLPQERLGAAVSNLAHAAQILVETVEYTKER 270

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      K  +A++   +    A   +   + +  +  + +AA A       K+
Sbjct: 271 KAFGQSIGSFQANKFTLAELVTKVDVTQAYVDQCVLAHNAGELTAIDAAKA-------KF 323

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W   +  +V+   ++  GG GY+ E  +AR + ++    I  GS   M   +   L
Sbjct: 324 WTADVQNSVLDACVQLHGGYGYMTEYRVARAWMDARVTRIWAGSNEIMKELIGRDL 379


>gi|167576795|ref|ZP_02369669.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 390

 Score =  237 bits (604), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 139/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            + L  
Sbjct: 28  REISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSIELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +A   +  +     P I S                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIAHAGSDELKARVLPGILSG-------------RKISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S + +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRASAIRDGDH-YVVNGEKVFITSGIRADYYTVAVRTDPHARGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
           LL +G   GL    LK K+G  ++ T  L F +        +G        V     L  
Sbjct: 192 LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D A  R   A        + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQMDHADGR---APALVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAQEIMKDLAARQLE 389


>gi|254515690|ref|ZP_05127750.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219675412|gb|EED31778.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 411

 Score =  237 bits (604), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 130/360 (36%), Gaps = 38/360 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           A+ R     GL  S  D    P V   ++ + A  +  +       L   S      +  
Sbjct: 74  AIFREMGELGLLGSTIDGYGCPGVDYTSYGLVAREVERVDSGYRSMLSVQSSLVMYPIYA 133

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PK+ + E+                 GLTE   G+D   + ++ + +  G
Sbjct: 134 YGTEEQREKYLPKLATGEW-------------IGCFGLTEPDYGSDPGGMVTRARSVDGG 180

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D F++ A+ +  V    +   + +    GL   +++ K+  R++
Sbjct: 181 YRISGAKMWISNSPVADVFVVWAKTDDDV----IRGFVLEKGMEGLSAPKIEGKLALRAS 236

Query: 285 ATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR- 340
            T E+     F     LL ++    GP         L++A   ++   +  AEA  +A  
Sbjct: 237 ITGEIVMDEVFVSEEQLLPNVQGLKGP------FGCLNNARYGIAWGALGAAEACWHAAL 290

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    +++  +AD+  +IA       R     D         A A  +
Sbjct: 291 NYTLERKQFDRPLAANQLVQLKLADMQTEIALGLQGCARAGQLMDAG-------AIAPDL 343

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  V  +A + +GG+G  +E  + RH       +   G+ +   L +  
Sbjct: 344 ISLIKRNSCGKALHVARQARDMLGGNGISDEYPVMRHMMNLEVVNTYEGTHDIHALILGR 403


>gi|225024858|ref|ZP_03714050.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC
           23834]
 gi|224942387|gb|EEG23596.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC
           23834]
          Length = 587

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 102/506 (20%), Positives = 179/506 (35%), Gaps = 68/506 (13%)

Query: 82  PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P        G R +  KV  HP   A  +     G         +               
Sbjct: 54  PTSRTGDLHGARLENGKVITHPDLAAAYQAFCEAGWPGLRAPAEYGGQGLPAVISAACEE 113

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +Y    L    L   +V +   +A   +    + + PK+    +  T             
Sbjct: 114 MYYCGNLALSLLPMLTVGAVETIAKHGSEEQKQTFLPKMSQGLWSGT------------- 160

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251
           + L+E + GTD++ + ++     DG Y +SG K F++    +       ++LA++ G   
Sbjct: 161 MNLSEPQAGTDLSQVATKAVPQEDGSYRISGQKTFITWGEHELTENIIHLVLARLPGTTS 220

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
               +  F+VP+         G  NG+    +++K+G  ++ T  ++F    G+L+G   
Sbjct: 221 GIKSLSLFIVPKYKIKPDGSIGERNGVSATAIEHKMGIHASPTCVMQFDEAEGYLIGKAG 280

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMKR 357
                +  M     L   I   +    +  +A+ YA  R            +I  P + R
Sbjct: 281 RGLLYMFTMMSHARLGVGIEGHAVAEAAYQQALAYAHERIQGSAPDGTPLTIIHHPDVAR 340

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAV 411
            +      IAA  AL  + A + D +    E AA          + PI K WC      +
Sbjct: 341 MLLVQKATIAAQRALYLQAAAALDASHQHPEPAAKKAAKGRLDYLIPIVKAWCSDNGTVL 400

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFS 470
              AM+  GG+GYIEE  IA+  R+    +I  G+      D+    +    +L   L +
Sbjct: 401 ANLAMQVFGGAGYIEETGIAQLVRDVRITAIYEGTNGVQAADLARKTVSDKGSLVRTLLA 460

Query: 471 TLEQ---DLGSSGKKVITILRDSISLCKE---------------DKGLARFLTEKIALAS 512
             +Q   +L +        L+ ++ L +                    A    E+I+L  
Sbjct: 461 EAQQTANELAAVEPATAEPLQRALELAERSTVLLVQQHEANPAATALNAAAYLEQISLTL 520

Query: 513 SAAALYR---AGMNDIA---DVFLEN 532
            A+AL +   A  N  A     F + 
Sbjct: 521 GASALAQNFLAARNAEARFGSAFCQA 546


>gi|332559207|ref|ZP_08413529.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           WS8N]
 gi|332276919|gb|EGJ22234.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           WS8N]
          Length = 562

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 178/486 (36%), Gaps = 44/486 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           A    F     + +E +              L R  + +  +L      G     V   P
Sbjct: 24  AATERFAEATPETVEAILAEAGKLCEEVLAPLQRPGDLHPARLE----NGV----VRTSP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +    R     G            +    A       +   A L        +      
Sbjct: 76  GYAEGYRAIADGGWVGIAASPEHGGMGLPMAVTTAVNEMMSSACLSLQLNPLLTQGQIEA 135

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   + PK+ S E+  T             + LTE + G+D+ A+ ++ + +
Sbjct: 136 LEHHASDALKALYLPKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPL 182

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----G 265
            DG Y ++G K +++   +D       ++LA++         +  FLVP+ L D     G
Sbjct: 183 EDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPG 242

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +    L+ K+G   + T  +++    G+L+G  +     +  M     L   +  V
Sbjct: 243 PRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGV 302

Query: 326 SGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                +   A+ YA  R   G G +I+   ++R +A +  +  +A A++   A + D  +
Sbjct: 303 GVAEAATQAAVAYAIERRQGGPGGIIEHADVRRMLAVMKAETFSARAIALACAVALDMGR 362

Query: 385 SR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +    E  A A ++ PI K +   +   V +  ++  GG+G+IE    A+  R+    +I
Sbjct: 363 ATGQPEWQARAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAI 422

Query: 443 LLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
             G+     +D++   +  G     +L   +E    ++  ++  +  D  +  +  +   
Sbjct: 423 YEGTNGIQAMDLVGRKMMDGGEAAFRLLQEIEDAAETARHRLPDLANDVWAASEALREAT 482

Query: 502 RFLTEK 507
             L  +
Sbjct: 483 ETLVGQ 488


>gi|108800595|ref|YP_640792.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869734|ref|YP_939686.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771014|gb|ABG09736.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695823|gb|ABL92896.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 386

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 136/377 (36%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     P  + ++R     GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAKHDAEHSFP--YEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V         ++W P++ S                    GLTE  G
Sbjct: 89  AITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSG-------------QALAAFGLTEPGG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLVPRLLED 264
           G+D  A  +   ++ DG + ++G K F+++  +D      + A      G   +  +L  
Sbjct: 136 GSDAGAPKTTA-RLDDGHWVINGSKQFITNSGTDITKLVTVTAVTGEVDGRKEISSILVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   +   NK+G  ++ T  L F +        L     G    ++IL    +  A
Sbjct: 195 VPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYANFLRILDEGRIAIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ YA+ R   G  +     +   IA +      A A  +  A    
Sbjct: 255 ALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALML 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   ++AA       I K    + A     +A +  GG G++ E  +ARHYR+S    
Sbjct: 315 SGKPFKKQAA-------IAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 368 IGEGTTEVQLMLIGREL 384


>gi|262279735|ref|ZP_06057520.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260086|gb|EEY78819.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter
           calcoaceticus RUH2202]
          Length = 379

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + T      W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGTEEQKGYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +   L D 
Sbjct: 129 AGSDLQAIRTQAVLENDH-YRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F + +      LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVYVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|296167439|ref|ZP_06849838.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897187|gb|EFG76794.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 132/372 (35%), Gaps = 36/372 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++       +          +R         +     M      
Sbjct: 37  YPDAWIEQMKR---IGIYGLAIPEEYGGSPVSMPCYVRVTEELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + + E   T             + LTE  GG+D+  +T+  
Sbjct: 94  AKLLTLFGTEEQRRAYLPAMATGELRAT-------------MALTEPGGGSDLQNMTTTA 140

Query: 219 QKI------SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGL 270
             +        G+       W  ++  S    +L + +         +  LL  G   GL
Sbjct: 141 LPVEGADGAPGGLRINGAKTWISNARRSGLIALLCKTDPNATPRHRGISILLV-GHGPGL 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILI--YLDSAIMSVS 326
              R   K+G +   + EL F +        L   +  G  + MK L    +  A  ++ 
Sbjct: 200 TVSRDLPKLGYKGVESCELSFDDFPVPESAVLGGRMGEGFSQMMKGLETGRIQVAARALG 259

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +L +A+ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +  
Sbjct: 260 VGTAALEDALAYAQQRESFGKPIWKHQSVGNYLADMATKLTAARQLTRYAAERYDSGERC 319

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+
Sbjct: 320 DMEAGMA-------KLFASEVAMEIALNAVRIHGGYGYSCEYDVERYFRDAPLMIVGEGT 372

Query: 447 GNAMVLDVLNLL 458
                  +   L
Sbjct: 373 NEIQRNVIAGQL 384


>gi|288922869|ref|ZP_06417033.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345795|gb|EFC80160.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 383

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 126/374 (33%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+ +  P  + ++ +    GL    +  S+            A      A       +  
Sbjct: 33  DEAKTFP--YEIIAQMGEMGLFGLPFPESYGGQGADYFALCLAIEELARADSSVAITLEA 90

Query: 155 SVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            V   A  +    T    ++W P + S                    GLTE   G+D   
Sbjct: 91  GVGLGAMPIYRFGTEAQREEWLPVLASG-------------RALGAFGLTEPGAGSDAGG 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNG 269
             +  +    G + ++G K F+++  +D   ++       E   G   +  ++      G
Sbjct: 138 TRTTARLEG-GEWVINGSKAFITNSGTDITRVVTVTAVTGEPVNGRPQISSIIVPVPTPG 196

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                  +K+G  ++ T  L F +        L        +   L  LD   +++S + 
Sbjct: 197 FSAGAPYSKVGWHASDTRPLSFQDVRVPEANLLGEPGRGYANF--LSILDEGRIAISALS 254

Query: 330 VSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V LA+A       YA+ R   G  +     +   +A++      A    +  A       
Sbjct: 255 VGLAQACVDESVKYAKEREAFGAPIARNQAIAFKLAEMETRTFVARTAYYEAAWRMLAGL 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A       K +  + A     EA +  GG G++ E  +ARH+R+S    I  
Sbjct: 315 PFKKEAAMA-------KLFSSEAAVTNAREATQIHGGYGFMNEYPVARHWRDSKILEIGE 367

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 368 GTSEVQKMLIARHL 381


>gi|294141410|ref|YP_003557388.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
 gi|293327879|dbj|BAJ02610.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12]
          Length = 598

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 91/549 (16%), Positives = 194/549 (35%), Gaps = 63/549 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-G 88
                       +L  L+  +     K  + +   +     Q +A         L+    
Sbjct: 7   PLRDYQF-----VLNELLNIYQRTELKGFDEIDADLGDAILQGVADFTTEVMLPLNGSGD 61

Query: 89  PGGER-WD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G +  D KV     +    ++ + +G      D  +      ++  + A  +     +
Sbjct: 62  VEGCKLVDGKVIAPKGFADAYQQYVDNGWATLTCDPQYGGQGLPESIGVFATEMKTATNM 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   +  + + +    +  + + +  K+ S E+  T             + LTE  
Sbjct: 122 AFAMYPGLTHGAYAAIHAHGSDALKQKYLEKLVSGEWTGT-------------MNLTESH 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE------GRVGC 255
            GTD+A + ++  +  +G++ +SG K F+SS   D       ++LA++         +  
Sbjct: 169 AGTDLALLRTKAVEAGEGLFAISGEKIFISSGDHDLAENIIHLVLARLPNAPEGVKGISL 228

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
           F VP+++ +     G  N LC   L++K+G   N+T  + F    G L+G+ +     + 
Sbjct: 229 FAVPKIMVNADGSLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLRAMF 288

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRA 358
            M     L   +  +    ++   A+ YA+ R    G             ++    ++R 
Sbjct: 289 TMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRGLSGVKDASQAADPILVHGDVRRM 348

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVI 412
           +         A AL  + A   DEA+   +               PI K +         
Sbjct: 349 LMAQKSFNEGARALIGQQALWLDEAERHPDADKAKAANKLAALFTPIVKGFITDRGFNAC 408

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL---EKGTNLF---E 466
            +A +  GG GYI E  + ++ R+     +  G+     LD++      +KG  L    E
Sbjct: 409 VDAQQVFGGHGYIHEWGMEQYVRDIRIAMLYEGTNGVQALDLVGRKVMGDKGATLMVWSE 468

Query: 467 QLFSTLEQDLGSSGKK--VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
            + + + +++G    K  +  ++  S  L K  + +A    +   +  + +  Y   +  
Sbjct: 469 MVKTLIGENMGKDAMKPYLAGLMDASGDLEKATQFMAVNAAKNPDILGAGSMPYMQILGI 528

Query: 525 IADVFLENR 533
               ++  R
Sbjct: 529 TVVAWMWTR 537


>gi|260549928|ref|ZP_05824143.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter sp.
           RUH2624]
 gi|260406920|gb|EEX00398.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter sp.
           RUH2624]
          Length = 379

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHEGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + +    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGSEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +   L D 
Sbjct: 129 AGSDLQAIRTQAILEND-QYRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|126436211|ref|YP_001071902.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236011|gb|ABN99411.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 386

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 133/377 (35%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D     P  + ++R     GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAKHDAEHSFP--YEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V         ++W P++ S                    GLTE  G
Sbjct: 89  AITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSG-------------QALAAFGLTEPGG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLVPRLLED 264
           G+D  A  +  +      + ++G K F+++  +D      + A      G   +  +L  
Sbjct: 136 GSDAGATKTTAKSDG-STWVINGSKQFITNSGTDITKLVTVTAVTGEVDGRKEISSILVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   +   NK+G  ++ T  L F +        L     G    ++IL    +  A
Sbjct: 195 VPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYANFLRILDEGRIAIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ YA+ R   G  +     +   IA +      A A  +  A    
Sbjct: 255 ALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALML 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   ++AA       I K    + A     +A +  GG G++ E  +ARHYR+S    
Sbjct: 315 SGKPFKKQAA-------IAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 368 IGEGTTEVQLMLIGREL 384


>gi|73540508|ref|YP_295028.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72117921|gb|AAZ60184.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 397

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 130/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 54  EIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K++ 
Sbjct: 114 EFGTEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVNG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++ G  G   +   + +    GL    +  K+G R+
Sbjct: 161 GYELTGAKMWITNSPIADVFVVWAKLAGEDGKEDIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE   +  R  
Sbjct: 221 SITGEIVLDQVFVP---EENIMPGVKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 TLDRKQFGRPLAQTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGLQAF 396


>gi|160896613|ref|YP_001562195.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160362197|gb|ABX33810.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 389

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 151/405 (37%), Gaps = 32/405 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
                Q L     +     H + P  E+ ++ +  P   A+++     G       +++ 
Sbjct: 10  ADARLQALIADIRHFVR--HRWHPLEEQIERDDSIP--PAVVQELRDKGYFGWSIPQAYG 65

Query: 126 PVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +       +R A     A +     + + +   +  +    T    + W P++   E  
Sbjct: 66  GLGLGTEELVRCAFELSQASVALRARVGTNTGIGSEALVADGTEAQKQRWLPRMARGE-- 123

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                      +   L LTE   G++ + I +  ++  D        ++  ++P++D F 
Sbjct: 124 -----------LTGCLALTEPDAGSEASNIQTTARREGDHYVLNGSKRFITNAPLADVFT 172

Query: 245 MLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LL 299
           ++A+  EG  G   +     + SP GL   +   K+G   +   ++ F +        + 
Sbjct: 173 VIARTGEGSTGSEGLTAFFVERSP-GLVTGQPYRKMGQAGSPVSDVHFQDCRVPADQIIG 231

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G        V  +     L  A +        L  A+ + R+R   G  + +  +++  +
Sbjct: 232 GREGQGFKTVMKVLNKQRLHLAALCTGPAIRMLDLALAHVRQREQFGQPVANFQLVQAML 291

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD   +I AA ++    A + D  +          + A + KY+  +M   V   A++  
Sbjct: 292 ADSRTEIFAAQSMILEAARARDRGED-------VALSASMCKYFASEMCGRVADRAVQMF 344

Query: 420 GGSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GG+GY+ +   I R++R+     +  G+     L++  L+ + + 
Sbjct: 345 GGAGYVADFSPIERYFRDVRLFRLYEGTSQIHQLNIAKLMLRESA 389


>gi|330824273|ref|YP_004387576.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|329309645|gb|AEB84060.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 381

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 153/412 (37%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           S + + +E   E V    A E        +P L  +   G       + P    + R   
Sbjct: 9   SWMDESIEAFREQVRRYIAAEF-------SPHLDGWRRQG-------YVP--RQVWRGFG 52

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D ++       A+++ A     +A+ E  + ++    ++  +    T    
Sbjct: 53  EMGFLLPEMDEAYGGAGASLAYQLVA--QDELAKAEMPNNLAVHTIASHYIRAYGTEAQK 110

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P++ + E                 + +TE   GTD+ AI ++ ++   G Y + G 
Sbjct: 111 QRWLPRLVNGEM-------------LAAIAMTEPGCGTDLKAIGTRARRDGGG-YVIDGA 156

Query: 232 KWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+++  +    I++A+  G     L   +LE     G    RL  KIG  ++ T EL 
Sbjct: 157 KTFITNGFTCNLLIVVARTGGPGSRGLSLIVLETEDLPGFRVGRLLEKIGLHASDTAELF 216

Query: 291 FSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F          L G+     G +        +  A+ + + + ++L   + YAR R V G
Sbjct: 217 FDGVRVPADQLLGGEEGQGFGQLMGQLPYERMLIAVPAAATIELALQLTLDYARERKVFG 276

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L+D    +  +A++A                  + K  +E A  A+        WC +
Sbjct: 277 APLLDMQNTRFKLAEVATIAHVVRTFVNDCTQRLVDGKLDAEAAYMAKW-------WCTE 329

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               V+ E ++  GG GY+ E  IAR Y  S    I  G+   M   +   L
Sbjct: 330 QQCRVVDECLQLFGGYGYMTEYPIARLYAASRVQKIYGGANEVMKDLIARKL 381


>gi|119474883|ref|ZP_01615236.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451086|gb|EAW32319.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 377

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 142/410 (34%), Gaps = 44/410 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +ELEL  E V     +E+A              P   +W+K    P    L  +    GL
Sbjct: 3   EELELFRENVRRFVKEEVA--------------PNYLQWEKDGIFP--RHLWNKLGEQGL 46

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKD 173
                   +E V       +     +  A   A    +   S   +  +    T    + 
Sbjct: 47  LAVDIPEEYEGVGADFLFSMVIQEEFSKANCAAVGGPMAVHSDIVSHYILNYGTQSQKQT 106

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ S +                 + +TE   G+D+  + +  ++  D  Y ++G K 
Sbjct: 107 YLPKMVSGDC-------------IGAVAMTEPGTGSDLQGVRTSAKRDGDD-YVINGSKT 152

Query: 234 FLSSPMS-DAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           F+++    D  I++A+      G       + D   +G    R   KIG  ++ T EL F
Sbjct: 153 FITNGQHCDLIIVVARTNLDVPGAKGTTLFMVDSDASGFQRGRNLEKIGLHASDTSELFF 212

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +       +LG+L+     +        L  AI +V+     L   I Y + R   G  
Sbjct: 213 EDVRVPASAILGELDCGFAVLMGELQRERLALAIGAVAAAEGILKSTIEYTKERKAFGAP 272

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +      K  +A+ A D+    +         +E K              + K  C +M 
Sbjct: 273 IAQLQNTKFKLAETATDVRLHRSFV-------EECKQLFMRRELDVATVSMAKLSCTEMQ 325

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V    ++  GG GY++E  ++R + ++    I  G+   M   +   L
Sbjct: 326 GRVADTCLQLHGGYGYMQEYGVSRAFVDARVQRIYGGTSEIMKELISRSL 375


>gi|23014213|ref|ZP_00054042.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 554

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 145/420 (34%), Gaps = 40/420 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V     +    R+   DG                       + +   A +    ++S +
Sbjct: 65  RVVMPQPFVEAYRQFAGDGWQGLAVPEEDGGQGLPHILASALSEMLSGACITYQMVLSLA 124

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +   +A   +      W P++ + E             V   + LTE + G+D+  + 
Sbjct: 125 HGAMRTLAASGSEAQRAAWIPRLAAGE-------------VLATMCLTEAQAGSDLGLVR 171

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEG------RVGCFLVPRLLE 263
           +     +DG + +SG K F+S    +        ++LA+          +  FL P  L+
Sbjct: 172 TMASPQADGSWSISGGKIFISGGDQNLTGGKIMHLVLARTPDAPAGVKGLSLFLCPSHLD 231

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG+ N +   RL+ K+G  ++ T ++ F      ++G        +  M     LD A+ 
Sbjct: 232 DGTRNAIQVVRLEEKMGMHASPTCQVAFDGAKAEIIGAPGEGLARMFTMMNAERLDVAVQ 291

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFR 375
            V    V+L  ++ YA  R   G          +     ++R +           A+  R
Sbjct: 292 GVGLAEVALQRSLAYANERKQ-GRAGKDAGPDFIAKHGDVRRMLLTQMALAMGCRAMVMR 350

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                +      E+ A   +M P+ K +  + A      A++  GG G++ E  + +  R
Sbjct: 351 TLVDLELG----EKPALMELMTPVCKAFATEAAMEAADHAIQVHGGYGFLREYRVEQILR 406

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           +     I  G+       V   + +        +  + +E  +  +       L  ++S 
Sbjct: 407 DGRITRIYEGTNGIQAATVAGRVIRLDNGRALAEFKAEVEDAMRLASPAFAGALDKALSA 466


>gi|295396699|ref|ZP_06806845.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970445|gb|EFG46374.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 377

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 137/376 (36%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+ E  P  H +++   + G+        +                        
Sbjct: 25  PQAAQTDESEEIP--HEVIKALANMGVMGLNLPEEYGGPGISSVAMTHMVAAVAGGCGST 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++    +   V +  T    K + P+  S E             V    GLTE   G
Sbjct: 83  ASIVTAHYLATDSVLIGGTEEQKKAYLPRAASGE-------------VIGAFGLTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           ++ A ++++  +  +G +      +  ++  +D  ++ A  +   G   +   L D    
Sbjct: 130 SNPAEMSTKAVRTENGWHLKGTKHFITNAGFADFVVVYAITDPEAGHRGISAFLVDTAKV 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G+     +  +G R +   E+ F          L     G    MK+L    ++ A MS
Sbjct: 190 EGIVVGGHEKTMGLRGSPVYEISFD-CELPADALLGEEGQGFKTAMKVLDRGRIEVAAMS 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++  A+ +++ RH++G  +     +   +ADI      A  ++   A+S D  +
Sbjct: 249 IGISRKAMEHAVAWSKTRHINGKPIAALQAIAFKLADIHARYQQAFLVTMDAAHSRDTGE 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + ++A A+++A     +       +  EA++  GG G+  +  + R+ R+     I  
Sbjct: 309 DFTIKSATAKLVASEAAAF-------ITDEALQIHGGYGFTRDFPLERYARDVRIFRIYE 361

Query: 445 GSGNAMVLDVLNLLEK 460
           GS       +   L +
Sbjct: 362 GSSEIQRTIIGRQLTR 377


>gi|325273964|ref|ZP_08140125.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
 gi|324100898|gb|EGB98583.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51]
          Length = 393

 Score =  236 bits (603), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 134/379 (35%), Gaps = 43/379 (11%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
             +  PA    +      GL  +     +             AR           +MS  
Sbjct: 48  HEQTDPAIFREMG---AVGLLGATIPEQYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQ 104

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + PK+ S E+                 GLTE   G+D  ++
Sbjct: 105 SSLVMVPINEFGTEAQKQKYLPKLASGEW-------------IGCFGLTEPNHGSDPGSM 151

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +K+  G        W  +SP++D F++ A+ +       +   + +    GL    
Sbjct: 152 ITRAKKVEGGYRLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWQGLSAPA 207

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+G R++ T E+   N F        D+    GP         L+SA   +S   + 
Sbjct: 208 IHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALG 261

Query: 332 LAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AEA  +  R     R   G  L    ++++ +AD+  +I  A     RL    DE  + 
Sbjct: 262 AAEACWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+
Sbjct: 321 ------AVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVARHLVNLEVVNTYEGT 374

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 375 HDVHAL-ILGRAQTGIQAF 392


>gi|332285292|ref|YP_004417203.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429245|gb|AEC20579.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 397

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/419 (20%), Positives = 143/419 (34%), Gaps = 36/419 (8%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
             H  L L  +          A  A Y   +L        R +K    PA  + +     
Sbjct: 8   HWHDPLLLDAQLTEEERMVRDAAQA-YAQDKLATRVLEAFRHEK--TDPAIFSEMG---E 61

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVH 171
            GL  +     +             AR           +MS  S      +    +    
Sbjct: 62  LGLLGATIPEEYGGAGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGSEEQK 121

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ S  +                 GLTE   G+D  ++ ++  K +DG       
Sbjct: 122 QKYLPKLASGAW-------------IGCFGLTEPNHGSDPGSMETRAVKTADGYKVSGNK 168

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D F++ A+V G      +   + D    GL    +  K+G R++ T E+  
Sbjct: 169 MWITNSPIADVFVVWAKVVGGDDDGKIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVM 228

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSG 346
                     L   +G          L+SA   ++   +  AEA  +  R     R   G
Sbjct: 229 DEVEISAEQMLPKVSGLR---GPFTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFG 285

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD+  DI  A     RL    D+  +       A  +  I K   C 
Sbjct: 286 RPLAQNQLIQKKLADMQTDITLALQGCLRLGRMKDDGTA-------AVEITSIMKRNSCG 338

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 339 KALDIARMARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGLQAF 396


>gi|311896917|dbj|BAJ29325.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 385

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 142/375 (37%), Gaps = 33/375 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++    P      R+    G++       +     +   K +A      A+       S
Sbjct: 32  WEEAGHPP--RDFYRKLGELGVYGIEVPEEYGG-AGETGFKYQAVIYEETARAGVTFGSS 88

Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              T   +  L    T    + W P   S E                 + +TE   G+D+
Sbjct: 89  GVHTGLVLPYLLEYATEEQKRRWLPGFVSGEIM-------------TAIAMTEPGAGSDL 135

Query: 212 AAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGS 266
           A I +  +  +DG  Y L+G K F++  + +D  +++ +    +       +  L  D +
Sbjct: 136 AGIATTAKLSADGTHYVLNGAKTFITGGVLADLVLVVCRTAPYDPADRRAGLSILCVDTA 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R   KIG R++ T EL FS+       LLG+   +   +    +   L  A+ 
Sbjct: 196 SEGYTVGRKLQKIGLRTSDTAELSFSDVKVPVENLLGEEGRAFSYLTHNLVQERLAIAVG 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +    ++  A+ Y + R V G  + +    K ++AD    + A  A+  +    +   
Sbjct: 256 AYASAAAAVRFAVQYVKERKVFGKAVAEFQNTKFSLADCQAQVLAQQAMVDQALELYQSG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++    I 
Sbjct: 316 ELTVADAAAA-------KLFCTESASEVIDKCLQLHGGYGYILEYPIARLYTDNRVFRIY 368

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   L
Sbjct: 369 GGTSEVMRTIIAKSL 383


>gi|256783767|ref|ZP_05522198.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289767649|ref|ZP_06527027.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289697848|gb|EFD65277.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 382

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 133/390 (34%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +   G    +V +          +   GL     D+ +         
Sbjct: 21  AFLAKEVAPHHQRWERNGVVDREVWYS---------AGRQGLLGPAVDQEYGGGGSDDFR 71

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +       +  A      L   +      +  + T    + W P   S            
Sbjct: 72  YSAVLIEEFARAGASGLALSLHNDIVGPYLTRLATEEQKRRWLPGFVSG----------- 120

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
              +   + +TE   G+D+  I +      D  Y L+G K F+S+ + +D  +++A+   
Sbjct: 121 --DIVTAIAMTEPGAGSDLQGIRTTATDRGDH-YLLNGSKTFISNGILADLVVVVARTTP 177

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G      L+ +   +G    R   KIG ++  T EL F++       LLG+ N +   
Sbjct: 178 EGGSAGQSLLVVERGADGFERGRNLAKIGQQAQDTAELFFNDVRVPKENLLGEENRAFTY 237

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+ + +     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 238 LMGNLAQERLAIAVGAAAATEEILDITTRYVKEREAFGRPLAKLQHVRFEIAEMATEAAV 297

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                       D   +         + A + K+W  ++   V+   ++  GG GY+ E 
Sbjct: 298 TRTF-------LDRCVTEHVAGRLDPVHASMAKWWATELQKRVVDRCLQLHGGYGYMSEY 350

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AR + +    +I  G+   M   +   L
Sbjct: 351 RVARAFLDGRIQTIYGGTTEIMKEIIGRSL 380


>gi|254819187|ref|ZP_05224188.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 397

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 136/384 (35%), Gaps = 37/384 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ + +P   A++ +    GL   +    +  +                  +  
Sbjct: 31  PNAVELERADTYP--QAIVDQLRDMGLFGLMIPEEYGGLGESLLTYALCVEELARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T    + + P++ + E                   ++E   G
Sbjct: 89  SGVLNTHFIVAYMLRQHGTDEQKQRFLPRMATGE-------------TRGAFSMSEPELG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEG--RVGCFLVPRLLEDG 265
           +D+AAI ++ ++  DG Y + G K +L++  +   +  L + +         +   L + 
Sbjct: 136 SDVAAIRTRARRNDDGTYTIDGQKMWLTNGATATLVATLVRTDEGSDKPHRNLTAFLVEK 195

Query: 266 SP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                    GL      +K+G +   T E+ F          L  +TG     +++  ++
Sbjct: 196 PVGFGEVVPGLRIPGKIDKLGYKGIETTEMIFDGYQAGADDVLGGATGQGF-FQMMDGIE 254

Query: 320 SAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              ++VS         +   A+ YA++R   G  + +   +   +A++A  + AA  +  
Sbjct: 255 VGRVNVSARACGVGLRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVEAAHLMMV 314

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A   D  +     A  A+ +       C +    V  ++    GG GY +E  I R  
Sbjct: 315 NAARLKDSGERNDVAAGMAKYL-------CSEYCAEVTQQSFRIHGGYGYSKEYEIERLM 367

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++P   I  G+       +   L
Sbjct: 368 RDAPFLLIGEGTSEIQKNIISKRL 391


>gi|295675629|ref|YP_003604153.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295435472|gb|ADG14642.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 396

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 133/364 (36%), Gaps = 31/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        A+ + A  +  +       +   S      +    
Sbjct: 57  REMGELGLLGPTIPEQYGGPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFG 116

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+   E+                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 117 SDAQKEKYLPKLARGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYS 163

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A++E   G   +   + +    GL    +  K+G R++ T
Sbjct: 164 LSGSKMWITNSPIADVFVVWAKLE-ENGKDNIRGFILEKGWKGLSAPAIHGKVGLRASIT 222

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+   + F     + N+  G          L+SA   ++   +  AEA  +  R     
Sbjct: 223 GEIVLDDVFVP---EENIMPGVSGLRGPFTCLNSARYGIAWGALGAAEACWHIARQYVLD 279

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  + +E       +  I K
Sbjct: 280 RKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAATE-------ITSIMK 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G
Sbjct: 333 RNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTG 391

Query: 462 TNLF 465
              F
Sbjct: 392 IQAF 395


>gi|320007517|gb|ADW02367.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 401

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 120/368 (32%), Gaps = 35/368 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  ELGLFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINTHFIVAYMLKQHGTQEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + P++   E             V     ++E   G+D++AI+S+G +  D        
Sbjct: 112 DTFLPRMALGE-------------VRGAFSMSEPALGSDVSAISSKGVREGDEYVLDGQK 158

Query: 232 KWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGS------PNGLCYQRLKNKIG 280
            W  +   S    +L + +     G      +   L +          GL      +K+G
Sbjct: 159 MWLTNGGSSTLVAVLCRSDEGHPEGTAPHKSMTTFLVEKEAGFGEVRPGLTIPGKIDKMG 218

Query: 281 NRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +   T EL            L G        + D   +  ++ A       + +    +
Sbjct: 219 YKGVDTTELIMDGLRIPANRVLGGTTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGV 278

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++R   G  +     ++  +A++   + AA A+    A   D  +    EA  A+ +
Sbjct: 279 SYAQQRETFGKPIAQHQAIQFKLAEMGTKVEAAHAMMVNAARKKDSGERNDLEAGMAKYL 338

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        +    V+ +A    GG G+ +E  I R YRE+P   I  G+     + +  
Sbjct: 339 A-------SEYCKEVVEDAFRIHGGYGFSKEYEIERLYREAPMLLIGEGTAEIQKMIIGR 391

Query: 457 LLEKGTNL 464
            L +   L
Sbjct: 392 RLLEEYRL 399


>gi|194290397|ref|YP_002006304.1| glutaryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224232|emb|CAQ70241.1| GLUTARYL-COA DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424]
          Length = 397

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 129/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 54  EIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 114 EFGTEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++ G  G   +   + +    GL    +  K+G R+
Sbjct: 161 GYELTGAKMWITNSPIADVFVVWAKLAGDDGKEDIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE   +  R  
Sbjct: 221 SITGEIVLDQVFVP---EENIMPGVKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 TLDRKQFGRPLAQTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGLQAF 396


>gi|172040286|ref|YP_001800000.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851590|emb|CAQ04566.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 389

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 143/372 (38%), Gaps = 23/372 (6%)

Query: 96  KVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +      +    + +++   GL     D  +        ++  A     +A+ ++G +  
Sbjct: 34  ERWHDQGYVDREMFKKAGDMGLLGMEVDEQWGGGGMND-YRFNAVLTEELAKADSGSI-- 90

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                  +V + T   +   +  +  + E       P+        + +TE   G D+A 
Sbjct: 91  -------IVGIQTINDLVIPYLQRFANDEQKERFLKPLCSGEKIAAIAMTEPEAGADLAG 143

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           I +  +   DG + ++G K F+S+ + +D  I++A  +   G   +  L+ +    G   
Sbjct: 144 IRTLARDNGDGSFTVNGAKTFISNGVQADFTIIVAITDPEKGRAGISLLIVEDGMEGYTK 203

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                K+G +S  T EL F N       LLG+     G +        L  A+ SV+  R
Sbjct: 204 TGPLKKVGLKSQDTAELSFENVQVPAENLLGERGAGFGYLRHNLAQERLSIAVGSVATSR 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +      +++ R   G  L+D    +  +A +   + AA +       +  + +     
Sbjct: 264 RAFDLVYQHSQDRKTFGNRLVDHQAYRWELAKMVQGLQAAQSFVDACIEAKVKGELDETT 323

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       KY   ++   V+ +A++  GG G++ E  IA HY +S    I  G    
Sbjct: 324 AAMA-------KYHTTELQIEVVNQALQMHGGYGFMMEYPIATHYLDSRVQPIYGGPNEI 376

Query: 450 MVLDVLNLLEKG 461
           M+  +   L KG
Sbjct: 377 MLEIISRKLAKG 388


>gi|183221848|ref|YP_001839844.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911919|ref|YP_001963474.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776595|gb|ABZ94896.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780270|gb|ABZ98568.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 584

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 93/509 (18%), Positives = 188/509 (36%), Gaps = 65/509 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+ +G++     +Q+ +++ + N  +L           KV F      +  +  + GL  
Sbjct: 67  LDAMGDFFGKDVSQK-SQIMDRN--ELKYEN------GKVIFPKETVEIYEKFRNTGLLG 117

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R    +          A +   A + A  + +  +  A +V+   T    + +A K
Sbjct: 118 YSLPREAGGLNFPATVGAFYAMIMARADV-AFCMTTTLLNLAQIVSRFGTKEQIETYATK 176

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
             + +                 + LTE   G+D+ ++ +   K  DG Y L+G K F+S 
Sbjct: 177 AATGDC-------------LFAMSLTEPDFGSDLNSVRTVAIKQEDGSYRLTGTKRFISQ 223

Query: 238 PMS-----DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
                      + LA+  +   G   +   L   S   +    ++ K+G   + T E+ +
Sbjct: 224 GCGLGDYPALLLTLARTGKPDGGARGLSVFLVKSS--DITVAGIEKKMGLHGSPTCEIVY 281

Query: 292 SNTFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            N++G +LG+  +        M   + L SA     G   +  E++ YA  R+  G  + 
Sbjct: 282 ENSYGEILGEEGLGLTRYTAGMTNFMRLVSASGGCGGGAAAYFESLKYANERNQFGKPIF 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----------EAKSRSE---------EA 390
           + P +   +  I  +  A   L+   A   D           +     +          +
Sbjct: 342 EIPAVFEMVHKIKRETNAMRLLTLETARVIDMYQHHQIRLEKQGLPDRDIRKDEKVKYWS 401

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A I+ PI KY+  +      + A++  GG+GY E+  I+R +R+S  N+I  G+    
Sbjct: 402 TLASILTPIAKYYSSEEGHKCTSIAVQVFGGAGYTEDYDISRMFRDSRINTIYEGTSQIH 461

Query: 451 VLDVLNLLEKGTNL---FEQLFSTLEQDLGSSGKKVITILR---------DSISLCKEDK 498
           V      +  G      F +  ++L+ ++ +    ++   +           I      +
Sbjct: 462 VRISTGAILAGMAGDGNFRKYLNSLKTEIPNPSLYLLEQEKLLESSIQCMRLIDSEARKE 521

Query: 499 GLARFLTEKIALASSAAALYRAGMNDIAD 527
            +A  L  ++A     + LY   ++ I D
Sbjct: 522 TVAENLMIQMARYLC-SLLYEQAVSKITD 549


>gi|83859089|ref|ZP_00952610.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83852536|gb|EAP90389.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 389

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 135/374 (36%), Gaps = 23/374 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P    W+  +  P+ H + ++    GL    +   +        + +  A    M   
Sbjct: 22  INPYVNEWEAADQFPS-HEVFKKMGDLGLLGLRYPEEYGGAGLDMTYSLVLAEELGMIDC 80

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +     T     AL            +  S E      AP     +   LG++E  
Sbjct: 81  GGVPMAIGVQTDMCTPAL-----------ARFGSDELRKQFLAPAIAGDMVGCLGVSEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+AA+ +  +   D         W  +   +D   +LA             ++    
Sbjct: 130 GGSDVAAVKTTAKSDGDDYIINGTKMWITNGLKADWCCLLANTSDGKPHESKSLIMVPMD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+  Q++ +KIG  S+ T +L F +        +     G +  M       +  A  
Sbjct: 190 LPGIEKQKI-HKIGMHSSDTAQLFFDDVRVPKRYRIGDEGAGFIYQMLQFQEERIYGAAS 248

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+  +   +   I Y R RH  G  L+D   +   +A++  ++    +L +R  + F E 
Sbjct: 249 SLKNLDKQIDLTIEYTRDRHAFGQPLLDNQAIHFRLAELRTEVELLRSLVYRCVDDFVEG 308

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K  ++       +A + K  C ++A  V    ++  GG GY  +  ++R +R+    SI 
Sbjct: 309 KDITK-------LASMAKLKCGRLAREVSDSCLQFWGGMGYTADNLVSRSFRDGRLISIG 361

Query: 444 LGSGNAMVLDVLNL 457
            G+   M+  +  L
Sbjct: 362 GGADEIMLGIIAKL 375


>gi|316934709|ref|YP_004109691.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602423|gb|ADU44958.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 384

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 126/369 (34%), Gaps = 24/369 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W+     PA H L ++    G         +       ++        LM   
Sbjct: 22  INPHVDEWENAGIFPA-HELFKKLGDLGFLGLNKPVEYGGQGLDYSYA-------LMMAE 73

Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           E G +    V  A  V   M TP + +       S E      AP         +G++E 
Sbjct: 74  ELGAINCGGVPMAIGVQTDMATPALARFG-----SDELRKEFLAPSIAGDYVACIGVSEP 128

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A I +  +   D      G  W  +   +D   +L              +    
Sbjct: 129 GAGSDVAGIKTTAKSDGDDYVISGGKMWITNGTQADWICLLCNTGEGPVHRNKSLICVPM 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G+   R  +K+G RS+ T ++ F          +     G    M       L  A 
Sbjct: 189 KTKGVTIARKLDKLGMRSSDTAQIYFDEVRVPKRNRIGEEGLGFTYQMVQFQEERLWGAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +     ++   I Y R R   G  L+D  V+   +A++  ++    +L +R A +   
Sbjct: 249 ACLKAHEKTIQNTIDYTRGRKAFGKPLLDNQVIHFRLAELQTEVELLRSLVYRAAEALVA 308

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +           +A + K    ++   +    ++  GG G++ E  ++R YR+S   +I
Sbjct: 309 GED-------VTGLATMAKLKAGRLGREIPDACLQFWGGMGFMNETLVSRSYRDSRLTAI 361

Query: 443 LLGSGNAMV 451
             G+   M+
Sbjct: 362 GGGADEVML 370


>gi|149918910|ref|ZP_01907396.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149820284|gb|EDM79701.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 374

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 147/382 (38%), Gaps = 32/382 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W+  +  P    L +++   GL    +  ++         ++  +     A
Sbjct: 12  REISPNIADWEAAKSFP--RELYQKAGEHGLLGVGFPEAYGGTQTDAFGRLLVSEELTRA 69

Query: 145 QLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                   LMS  +    ++AL  +  + +  AP + + E               I L +
Sbjct: 70  GSGGLIAGLMSHGIGLPPIIAL-GSEALKERIAPPVIAGE-------------AIIALAV 115

Query: 203 TEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           TE  GG+D+A I ++ +K+ +G    Y + G K F++S +   ++  A   G  G   V 
Sbjct: 116 TEPSGGSDVANIQTKARKVGEGDEARYIVDGAKTFITSGVRADWLTTAVRTGGEGMGGVS 175

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L   G   G+    L +K+G   + T  + F N       L+G  N     +       
Sbjct: 176 LLAIPGDAEGVSRAPL-DKMGWHCSDTAAIYFDNVEVPASNLIGFENAGFMGIMVNFNNE 234

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A M++   R+   EA  +A++R   G  L+   V++  + D+A  I A   +   L
Sbjct: 235 RMMLAAMALGFARLCFEEAADWAQQRETFGKPLVRHQVVRHKLVDMATSIRAVECVLDDL 294

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +    E   A+ +A      C K       EA++ +GG+GYI      R YRE
Sbjct: 295 AWRIDRGEQPIAEVCMAKNLATQCVELCAK-------EAVQILGGAGYIVGTHCERIYRE 347

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +   SI  G+   M       +
Sbjct: 348 TKVLSIGGGAEEIMKELAARQM 369


>gi|68146493|emb|CAH10179.1| ChaO protein [Streptomyces chartreusis]
          Length = 388

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 130/379 (34%), Gaps = 29/379 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              ++ + +P   AL+ R    G+      + +          +          +     
Sbjct: 31  RELERTDTYPE--ALIERMKELGVFGLAVPQEYGGTPVSMPCYVLVTEELARGWMSLAGA 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++    T    +   P + + E   T             + LTE  GG+D+
Sbjct: 89  MGGHTVVAKLLLHFGTEEQRQRHLPLMATGETRAT-------------MALTETGGGSDL 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNG 269
            A+ +  ++  DG        W  +S  S    +L + +         +  LL +  P G
Sbjct: 136 QAMRTVARREGDGYVVNGAKTWITNSRRSRLIALLCKTDPDAEPAHSGMSVLLVEHGP-G 194

Query: 270 LCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           L   R   K+G +   + EL F N        L G        +        L  A  ++
Sbjct: 195 LTVSRDLPKLGYKGVESCELSFENHRARADALLGGVEGHGFAQMMRGLETGRLQVAARAL 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L +A+ YA+ R   G  +     +   +AD+A  + AA  L+   A   +    
Sbjct: 255 GVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTAARQLTLYAARRAEAGHR 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              EA  A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G
Sbjct: 315 VDMEAGMA-------KLFASETAMQIALNAVRIHGGYGYSTEFDVERYFRDAPLMIVGEG 367

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +       + + L K   L
Sbjct: 368 TNEIQRNIIADRLVKRGGL 386


>gi|83718162|ref|YP_438493.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167614964|ref|ZP_02383599.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257141544|ref|ZP_05589806.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651987|gb|ABC36051.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 390

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 138/382 (36%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    WD+    P    L  ++   GL    +  ++  V            + L  
Sbjct: 28  REISPYVNDWDEAGEFP--RELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICSIELAR 85

Query: 145 QLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               G + S    +  A  +    +  +     P I S                   L +
Sbjct: 86  CGAGGVVSSLMSHTIGAPPIVHAGSDELKARVLPGILSG-------------RKISALAI 132

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPR 260
           TE  GG+D+AA+ +   +  D  Y ++G K F++S + +D + +  + +    G   +  
Sbjct: 133 TEPGGGSDVAALRASAIRDGDH-YVVNGEKVFITSGIRADYYTVAVRTDPHARGAKGLSL 191

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
           LL +G   GL    LK K+G  ++ T  L F +        +G        V     L  
Sbjct: 192 LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVMQNFNLER 250

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++   +V   +A+ +AR+R   G  + D  V++  + D+A+ I A  A   + A
Sbjct: 251 FSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATRAWLEQCA 310

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D A  R   A        + K +  +        A++ +GG GY+      R YRE 
Sbjct: 311 WQMDHADGR---APALVATICMLKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREV 367

Query: 438 PANSILLGSGNAMVLDVLNLLE 459
             N I  G+   M       LE
Sbjct: 368 KVNMIGGGAQEIMKDLAARQLE 389


>gi|56459289|ref|YP_154570.1| glutaryl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56178299|gb|AAV81021.1| Glutaryl-CoA dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 390

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 126/362 (34%), Gaps = 40/362 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +        ++ + A  +  +       +   S      +
Sbjct: 52  RQIMNELGEMGLLGATLPEEYGGSGVNHVSYGLIAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + PK+ S E+                 GLTE   G+D A++ +  ++  
Sbjct: 112 YTFGTEAQRKKYLPKLASGEW-------------VGCFGLTEPDSGSDPASMRTTAKRTD 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+++G +  F++     +    GL   ++  K   R
Sbjct: 159 KGYVLSGSKMWITNSPIADVFVVWAKLDGEIRGFVL-----EKGMKGLSAPKIDGKFSLR 213

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+           +  ++    GP         L+ A   ++   +  AE   +A
Sbjct: 214 ASITGEIVMDGVEVSEDHIFPEVKGLKGP------FSCLNKARYGIAWGSLGAAEFCWHA 267

Query: 340 R-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
                  R   G  L    ++++ +AD+  +I+       +     D+            
Sbjct: 268 ARQYTLERSQFGRPLAANQLIQKKLADMQTEISLGLLGCLQAGRELDKGTLNP------- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I   + K   C  A  +  +A +  GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 321 IAISLIKRNSCGKALDIARQARDMHGGNGIADEYHVIRHVMNLEAVNTYEGTHDIHALIL 380

Query: 455 LN 456
             
Sbjct: 381 GR 382


>gi|169796649|ref|YP_001714442.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156153|ref|YP_002318573.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|215484111|ref|YP_002326336.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332855608|ref|ZP_08435962.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332868055|ref|ZP_08437990.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169149576|emb|CAM87465.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE]
 gi|213055313|gb|ACJ40215.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|213986907|gb|ACJ57206.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332727377|gb|EGJ58812.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733603|gb|EGJ64764.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 379

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + +    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGSEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|311107955|ref|YP_003980808.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762644|gb|ADP18093.1| acyl-CoA dehydrogenase, N-terminal domain protein 12 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 137/396 (34%), Gaps = 39/396 (9%)

Query: 79  YNTPQLHAYGPGGER-WDKVEFH--PAW-------HALLRRSIHDGLHCSIWDRSFEPVV 128
           + TP++  +     R W+       PAW         +  +    G   +     +    
Sbjct: 10  WRTPEIEQFQQTARRYWNAELLPRLPAWEAQGGIDREVWNQLGAMGFLLADLPSEYGGGD 69

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              +H   AA + + A+   G    P    A  +    +    + W P + S        
Sbjct: 70  GDYSHL--AALVEVSAECGFGPGFGPHYIVAHYLHHYGSEEQKRRWLPGMASG------- 120

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247
                  +   +G+TE   G+D+  I ++ ++  D  Y ++G K F ++      +MLA 
Sbjct: 121 ------DIVASIGMTEPGAGSDLQGIKTRARRDGD-SYVITGSKTFNTNGHHADLVMLAV 173

Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +  +G   V  L+ +     G       +KIG ++  TVEL F          L  + 
Sbjct: 174 KTDASLGAKGVSLLMVETRDLAGFRRGEPLDKIGLKAQDTVELFFDEARVPAANLLGAAE 233

Query: 307 GPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           G      +       L   I +V  +  +L   + +  +R   G  L      +   A++
Sbjct: 234 GQGFSQMMAQLPYERLLIGIRAVGSIERALRLTLEHVHQRQAFGQPLFKLQNTRFEFAEM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +   A     +      + +  +  AA A+        W  +     +   ++  GG 
Sbjct: 294 KTEATLARVFIDQCIAWQQQGRLDAATAAMAKW-------WGTQKECETVDRCLQLFGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ E  IAR Y +S    I  G+   M   +   L
Sbjct: 347 GFMREYPIARMYMDSRGQKIYGGANEVMKEIIARQL 382


>gi|319760887|ref|YP_004124824.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822791|ref|YP_004386094.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|317115448|gb|ADU97936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308163|gb|AEB82578.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 385

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 85/386 (22%), Positives = 136/386 (35%), Gaps = 34/386 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN  TP    +   G              L R +   GL C     ++        +   
Sbjct: 30  ANEITPHHAEWEREGR---------VPRQLWRDAGAAGLLCPSIADAYGGGGGDYLYSAI 80

Query: 137 AARLYLMAQL-EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                  A         + S   A  +    +    +++ PK+ S E             
Sbjct: 81  VVEEIARALATGVTGFTTHSENVAPYLLEFGSEAQKREFLPKMASGE------------- 127

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           V   L +TE   G+D+ AI +  + +  G        +  +   +D  I+ A+     G 
Sbjct: 128 VVGSLAMTEPGAGSDLKAIRTTAKAVDGGFEITGQKTFITNGAHADRVIVFAKTSPEAGA 187

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             +     D    G    R+ +KIG  +  T EL F   F     L+G+LN   G     
Sbjct: 188 RGISLFWVDTKTPGFAVGRVLDKIGQLAQDTAELFFDKVFVPRDALIGELNAGFGYAMSG 247

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            +   L  A+     + V+L   I Y ++R   G  LID   ++  +ADI    AA  A 
Sbjct: 248 LVRERLLIALRCAVALEVALDWTIDYVKQRQAFGHALIDNQYIRFRLADIKTHAAATRAF 307

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                  + + +  ++ AA A++ A          A   I + M+  GG+GY+ E  IAR
Sbjct: 308 VDSCLAQYLQGQLTADGAAMAKLWASE--------ATRAIDDLMQFFGGNGYMREYPIAR 359

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            Y +   N I  GS   M   +   L
Sbjct: 360 AYADVRPNRIYGGSSEIMREVIARGL 385


>gi|94313352|ref|YP_586561.1| Butyryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357204|gb|ABF11292.1| acyl-CoA dehydrogenase(Butyryl-CoA dehydrogenase) [Cupriavidus
           metallidurans CH34]
          Length = 388

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 131/367 (35%), Gaps = 35/367 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      G    +    +  +          A       +  G L++    +  + A
Sbjct: 39  RDLIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGWMSVGSLIARG--NGLIGA 96

Query: 164 LMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           L    P    ++ P++   E+                  L+E   G+D+A I+ +  +  
Sbjct: 97  LKGLAPEKKAEYLPRMARGEF-------------LGAFSLSEPNAGSDVANISCRAVRDG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS----PNGLCYQR 274
           D         W   +  SD  +++ + +     +     +   L +      P G+    
Sbjct: 144 DDWLITGNKYWCTFADQSDFILVICRTDPVIDPKARHKGLSAFLVEKPRGELPEGVK-GS 202

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  KIG     T EL F N       ++G+   +              +A  S+   + S
Sbjct: 203 VIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLTTAGLETARAHTAARSIGLAQGS 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L ++I YA+ R   G  + +   ++  +AD+A  I A+ AL + +    DE         
Sbjct: 263 LEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEASRALLYTVCEKIDEGV------- 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A   A + K +  +M   V +E ++  GG+GY    +  R++R++    I  G+    +
Sbjct: 316 RADTEASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQM 375

Query: 452 LDVLNLL 458
             + + +
Sbjct: 376 RIISDAM 382


>gi|296270064|ref|YP_003652696.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092851|gb|ADG88803.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 386

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 149/401 (37%), Gaps = 33/401 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   Q++  +A     +     P    ++  + +PA   L+ R    G    +    + 
Sbjct: 3   LTPEEQQIVDLARAFVDEQVR--PRVREFEPDDVYPA--PLIDRMKELGFFGMLVPPEYG 58

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 A   R +       +     +      A +V    TPR  ++  P         
Sbjct: 59  GAGVSMACFARVSEELARGWMSLAGAIGGHSVIAYLVREYGTPRQREELLPG-------- 110

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI 244
                M   S+   + LTE  GG+D+ A+ +      DG  Y + G K ++S+    + I
Sbjct: 111 -----MADGSIRAAMALTEPDGGSDLQAMRTVATLTPDGTAYRVRGVKTWISNARHASVI 165

Query: 245 -MLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +L + + R       +  LL     +G    R   K+G R     E+ F +        
Sbjct: 166 GLLCKTDPRAEPRHKGISVLLVHRD-HGYTVSRKLPKLGYRGVEACEVVFDDVTVPADAV 224

Query: 302 LNV--STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L      G  + M+ L    +  A  +V   + +  +A+ YAR+R   G  +     +  
Sbjct: 225 LGGEPGRGWAQMMRGLEVGRVQVAARAVGVAQAAFDDALAYARQRETFGKPIWQHQSVGN 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  + AA  L+   A+  D+ K    EA  A       K +  + A  V  +A+ 
Sbjct: 285 LLADMATKVHAARLLTLDAAHRIDQGKRADLEAGMA-------KLFASEAAMQVALDAIR 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+GY  E  + R++R++P   +  G+       +   L
Sbjct: 338 VHGGNGYSREYDVERYFRDAPLMIVGEGTNEIQRQVITGRL 378


>gi|325121451|gb|ADY80974.1| acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 379

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RELWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + T    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                     +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HL-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|111026396|ref|YP_708679.1| long chain acy-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825239|gb|ABH00521.1| probable long chain acy-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 386

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 135/378 (35%), Gaps = 34/378 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             W+     P      R     G+        F     + + K  A      A       
Sbjct: 30  HEWEADGHPP--RDFYRCLGELGILGIQAPEEFGG-GGEASVKFNAVVAEECAAAGVSFG 86

Query: 152 MSPSVTSASMV---ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            S SV +  ++    +  T    + W P   S               +   + +TE   G
Sbjct: 87  GSYSVHTNLILPYLTMYGTGEQLQRWLPGFCSG-------------DLMFAIAMTEPGTG 133

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLE 263
           +D+A I++  +   DG  Y L+G K F++  + +D  + + +    +       +  L+ 
Sbjct: 134 SDLANISATAKLSEDGSHYVLNGSKTFITGGVLADRILTVCRTSPFDPENRRSGLSILVV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D S  G    R   KIG +++ T EL + +       LLG+       +        L  
Sbjct: 194 DTSSEGFSVGRKLQKIGLKTSDTAELSYDDVMVPVSDLLGEEGKGFSYLTHNLAQERLTI 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  + +    ++  AI Y   R V G  +      K  +A+ + ++ A   +        
Sbjct: 254 AFDASATASAAVQHAIAYTTDRKVFGKPVAAFQNTKFVLAECSTELQAVQLMVDNALELH 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +   ++AA A       K +  + A  +I + ++  GG GYI E  IAR Y ++  +
Sbjct: 314 DRGELSVQDAARA-------KLFSTEAAGRIIDKCLQLHGGYGYILEYPIARLYADTRVS 366

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 367 RIFGGTSEVMKTIIAKDL 384


>gi|255037301|ref|YP_003087922.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254950057|gb|ACT94757.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 604

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 145/390 (37%), Gaps = 37/390 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ +       L+ ++   GL  +     F          +  A         +  L
Sbjct: 56  DEIDQAKSPALISELMDKAGELGLLGTAVPEEFGGFGMNFNTSMLVAEATGAGNSFSVAL 115

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + +      +           + PK+ + E+                  LTE   G+D 
Sbjct: 116 SAHTGIGTLPILYYGDDSQKTKYLPKLATGEWK-------------AAYCLTEPDSGSDA 162

Query: 212 AAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN 268
            +  ++ +   DG          W  +   +D FI+ A++E        +   + + S  
Sbjct: 163 NSGKTKARLSGDGTHYVIDGQKMWITNGGFADVFIVFAKIEENGQTDKNLTAFIIEKSFG 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           G+     ++K+G + + T +L F++    +    N+ +      KI +  L+   + ++ 
Sbjct: 223 GITMNEPEHKMGIKGSDTRQLFFNDCRVPV---ENMLSERGNGFKIAVNILNIGRIKLAA 279

Query: 328 MR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                     ++AI YA  R   G  + +   +K  +A++A+ + A  + ++R+  + D+
Sbjct: 280 AALGGAKRVASQAIQYANERKQFGTAIANFGAIKHKLAEMAVQMFATESAAYRVGQNIDD 339

Query: 383 ------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                       A+++ +      I   I K    ++   V+ E ++  GG G+  +  +
Sbjct: 340 LIQAFKEKGMNDAEAKLKALEEFAIECAIMKVHGSEVLDFVVDEGVQVYGGMGFSADAPM 399

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            R YR+S  N I  G+     L V+++L K
Sbjct: 400 DRAYRDSRINRIFEGTNEINRLLVVDMLLK 429


>gi|159035708|ref|YP_001534961.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157914543|gb|ABV95970.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 384

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 125/364 (34%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
           + ++R+    GL    +      +         A           A  L +     A  +
Sbjct: 39  YDVIRQMGKMGLFGLPFPEEHGGMGGDYFALCLALEELARIDSSVAITLEAAVSLGAMPI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P++ +              +     GLTE   G+D     ++     
Sbjct: 99  YRFGTDEQRERWLPRLLTG-------------TALAAFGLTEPGFGSDAGGTQTRAVLDE 145

Query: 223 --DGIYCLSGHKWFLSSP--MSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKN 277
             D         +  +S   ++D   + A    R  G   +  ++      G       +
Sbjct: 146 TTDEWVINGAKAFITNSGTDITDLVTVTAVTGTRPDGSKELSTIIVPTGTPGFTVAPGYS 205

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
           K+G  ++ T EL F +        L     G  + ++IL    +  A ++V   +  + E
Sbjct: 206 KVGWTASDTHELTFDDCRVPAGNLLGERGRGFAQFLRILDEGRIAIAALAVGLAQGCVDE 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YAR RH  G  +     ++  IAD+ L +  A    +  A      +    +AA A+
Sbjct: 266 SVRYARERHAFGRPIGSNQAIQFKIADMELRVHTARLAYYDAAQRMLAGEPFKRQAAIAK 325

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A         +A     +A +  GG G++ E  +AR +R++    I  G+     + +
Sbjct: 326 LHAST-------IAVDNARDATQIHGGYGFMNEFPVARFWRDAKILEIGEGTSEVQRMII 378

Query: 455 LNLL 458
              L
Sbjct: 379 AREL 382


>gi|108799487|ref|YP_639684.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119868600|ref|YP_938552.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126435141|ref|YP_001070832.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108769906|gb|ABG08628.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119694689|gb|ABL91762.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126234941|gb|ABN98341.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 405

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 128/389 (32%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++  +   GL+                  I             
Sbjct: 30  PAAAEWDEREETP--WPIIEEAAKVGLYTPELFAQMAGES-SGIGLITVFEELFWGDAGI 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP+   DW P +F    D          +       +E   G
Sbjct: 87  ALSILATGLAAAALASNGTPQQIGDWLPAMFGTPGD----------TKVAAFCSSEPGAG 136

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ A+ ++       D         W  +  +++  +++A V   +G       +    
Sbjct: 137 SDVGAVRTRAVYDEAADEWVLNGTKTWATNGGIANVHVVVASVYPDLGTRGQASFIVPPG 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------------I 314
             GL   +   K G R++ T E+   N        L       + M              
Sbjct: 197 TRGLSQGQKFKKHGIRASHTAEVVLDNVRIPGELVLGGREKFEQRMARAKEGQRTASQAA 256

Query: 315 LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +   +        M++   R +   A+ YA +R   G  + +   +   +AD+   I A 
Sbjct: 257 MATFERTRPFVGAMALGVARAAYEYALDYACQREQFGRKIGEFQAVAFKLADMKARIDAT 316

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R        K      A+      + K +  + A  V  EA++ +GG+GY  +  
Sbjct: 317 RMLVWRAGWMHRNNK------AFTSAEGSMAKLYASETAVYVTDEAIQILGGNGYTRDYP 370

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   L
Sbjct: 371 VERMHRDAKIFTIFEGTSEIQRLVIGRAL 399


>gi|328542700|ref|YP_004302809.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412446|gb|ADZ69509.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 387

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 136/375 (36%), Gaps = 29/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+ D+    P    L  R    G+    +      +       + A      A    
Sbjct: 26  PHAEQLDRDGVFPT--DLFHRLGELGVMSIPFSEDLGGMGLGVFDAVLAIEEIARADQSL 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S+ +   VA   +    + W P I S                   +  TE   G
Sbjct: 84  AVSAMVSMATGLTVARFGSEEQKRTWLPDIVSG-------------RKICSIAGTEPDAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEG-RVGCFLVPRLLED 264
           +D A   ++  + +DG + L+G K ++++P +D     I+LA               L  
Sbjct: 131 SDTAGFKTRAVEGADGTWTLNGEKAYITNPGTDISSFTIILAVSSPKEAEKKQYTLFLVP 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G        K+G RS+ T  L   +       ++G  +     +        L  +
Sbjct: 191 NDTPGYSRGEKYRKMGWRSSDTRPLYLDDCRVPASAIVGGAHKGRWVLHKGYQAARLFLS 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   + SL  +I YA+ R   GG L    +++  IA +AL + +A  +++R A   D
Sbjct: 251 ACSLGLAQASLDHSIAYAKTRQAFGGSLGRLQLVQEMIAKMALKVDSARLVTYRAAWKVD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +      + A++ A        +    V   A++  GG G++++  ++R+ R++   +
Sbjct: 311 QGQDDLMALSMAKLHA-------TETGSEVANMAIQVHGGWGFMDDCPVSRYLRDNRICT 363

Query: 442 ILLGSGNAMVLDVLN 456
           I  GS     L +  
Sbjct: 364 IGDGSSQIQTLLIAR 378


>gi|317405891|gb|EFV86173.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 397

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 128/363 (35%), Gaps = 36/363 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRV 170
             GL  +     +             AR           +MS  S      +    +   
Sbjct: 61  ELGLLGATIPAEYGGAGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGSEAQ 120

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+   E+                 GLTE   G+D   + ++  K +DG      
Sbjct: 121 KQKYLPKLARGEW-------------IGCFGLTEPNHGSDPGGMETRAVKTADGYKLTGN 167

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+  G      +   + +    GL    +  K+G R++ T E+ 
Sbjct: 168 KMWITNSPIADVFVVWAKCVGGEFDGKIRGFILEKGTKGLTAPAIHGKVGLRASITGEIV 227

Query: 291 FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----R 342
                     ++  ++   GP         L+SA   ++   +  AEA  +  R     R
Sbjct: 228 MDEVEVSADQMMPGVSGLKGP------FTCLNSARYGIAWGAIGAAEACWHTARQYTLDR 281

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD+  +I  A     RL    DE  +       A  +  I K 
Sbjct: 282 KQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKR 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G 
Sbjct: 335 NSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGI 393

Query: 463 NLF 465
             F
Sbjct: 394 QAF 396


>gi|289624132|ref|ZP_06457086.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330865822|gb|EGH00531.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 568

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQHFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|300711634|ref|YP_003737448.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
 gi|299125317|gb|ADJ15656.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
          Length = 380

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 132/375 (35%), Gaps = 27/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  +    +P    +  +     +        +  +   Q  + +    L  ++   
Sbjct: 26  PIAQEIETEHRYPE--EVFDQLADLDIMGVPISEEYGGLGGDQLMYALVTEELGRVSGSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                +    ++  + L  T    + W   +   EY               G  LTE   
Sbjct: 84  GLSYAAHVSLASKPIELFGTDEQKERWLRPLAEGEY-------------VGGWALTEPGS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           G+D + + ++ +K  D        ++  ++  + + ++ A  +   G   +   + D   
Sbjct: 131 GSDASDMNTRAEKDGDEYVLNGTKQFITNASEAGSILVKAVTDPEAGYDGISTFIVDPRE 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
            +G     +  K+G  ++ T E++  +        L  V  G  +  K L    +  A +
Sbjct: 191 DDGFEVTTIWEKMGLNASPTCEIQLDDVRLPEDRLLGEVGDGWNQTKKTLDGGRISIAAL 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +   A  Y+  R   G  +     ++  +  +      A  L+   A ++D  
Sbjct: 251 SVGLAQGAYEAARKYSTEREQFGQPISKFDAVRNTVVAMHRKTERARLLTHDAATTYDRG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + ++A A++ A        +    V  +A++ +GG GY E+ +  R YR++    I 
Sbjct: 311 EEVTRKSALAKLDA-------SEACREVAEDAVQVLGGYGYTEDFAPQRFYRDAKLMEIG 363

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   +
Sbjct: 364 EGTSEIQQLVIGREI 378


>gi|312195499|ref|YP_004015560.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311226835|gb|ADP79690.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score =  236 bits (602), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 138/404 (34%), Gaps = 40/404 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  L  T +E AR      P    +       D+ +  P  +A++ +    GL    +  
Sbjct: 10  QEALRRTVEEFAREV--VAPVAAHH-------DETKTFP--YAVIDQMADLGLFGLPFPE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSR 181
            +            A      A       +   V   A  +    T    K+W P + S 
Sbjct: 59  EWGGQGGDYFLLCLAIEELARADSSVAITLEAGVGLGAMPIYRFGTEEQRKEWLPLLASG 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D     +  +   D  + ++G K F+++  +D
Sbjct: 119 -------------KALGAFGLTEPGAGSDAGGTRTTAKLDGDE-WVINGSKAFITNSGTD 164

Query: 242 AFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
              ++           G   +  ++      G   +   +K+G  ++ T  L F++    
Sbjct: 165 ITRVVTVTAVTGRSAAGKPEISTIIVPVPTPGFTAEPPYSKVGWHASDTHPLSFADVRVP 224

Query: 298 LLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L     G    ++IL    +  + +SV   +  + E++ YA+ R   G  +     
Sbjct: 225 AANLLGEQGRGYANFLRILDEGRIAISALSVGLAQACVDESVRYAKEREAFGVPIGRYQA 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA++      A    +  A          +EAA       I K +  + A     E
Sbjct: 285 IQFKIAEMEARAHVARTAYYDAAARMLAGLPFKKEAA-------IAKLFSSEAAVTNARE 337

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A +  GG G++ E  +ARH+R++    I  G+     + +   L
Sbjct: 338 ATQIFGGYGFMNEYPVARHWRDAKILEIGEGTSEVQKMLIARHL 381


>gi|33592628|ref|NP_880272.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33572274|emb|CAE41826.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332382045|gb|AEE66892.1| glutaryl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 397

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 130/376 (34%), Gaps = 33/376 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
             +  PA  A +      GL  +     +             AR           +MS  
Sbjct: 48  HEKTDPAIFAEMG---ELGLLGATIPTEYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQ 104

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E+                 GLTE   G+D   +
Sbjct: 105 SSLVMVPINEFGSEAQKRKYLPKLAAGEW-------------IGCFGLTEPNHGSDPGGM 151

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  DG        W  +SP++D F++ A+  G      +   + +    GL    
Sbjct: 152 ETRATKTPDGYKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKIRGFILEKGMKGLSAPA 211

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +  K+G R++ T E+         + +  +  G          L+SA   ++   +  AE
Sbjct: 212 IHGKVGLRASITGEIVMDEV---EVSEEQMMPGVSGLKGPFTCLNSARYGIAWGALGAAE 268

Query: 335 AIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A  +  R     R   G  L    ++++ +AD+  +I        RL    DE  +    
Sbjct: 269 ACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA---- 324

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ + 
Sbjct: 325 ---AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDV 381

Query: 450 MVLDVLNLLEKGTNLF 465
             L +L   + G   F
Sbjct: 382 HAL-ILGRAQTGLQAF 396


>gi|219556013|ref|ZP_03535089.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T17]
 gi|289568118|ref|ZP_06448345.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T17]
 gi|289541871|gb|EFD45520.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T17]
          Length = 388

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 134/370 (36%), Gaps = 34/370 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTLFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L + + YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDLLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EA  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+  
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMILGEGTNE 372

Query: 449 AMVLDVLNLL 458
                +   L
Sbjct: 373 IQRNVIAGQL 382


>gi|51892391|ref|YP_075082.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856080|dbj|BAD40238.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium
           thermophilum IAM 14863]
          Length = 387

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 140/408 (34%), Gaps = 35/408 (8%)

Query: 63  EYVLSCTAQELARMANYN-----TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           ++ LS   QEL R+A         P+       G       +   +    +     GL  
Sbjct: 2   QFELSPEQQELVRLARQVGRDVIAPRAAQVDAEG------VYPEDYFQAFK---ETGLLG 52

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +          + A          AG ++  +  S   ++L  T    +++   
Sbjct: 53  VAIPEEYGGAGLGCLGLVLAVEEVAKHCCTAGLMLLLTRLSTMAISLAGTEAQKREYLEG 112

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
             +                     L+E   G+D  AI ++  +  D         W   +
Sbjct: 113 TATG-------------RRRGAFCLSEPDAGSDAQAIRTRAVRKGDRYVIQGTKSWISGA 159

Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +D F++ A+      G       + D    G+   R ++K+G R     ++ F +   
Sbjct: 160 GAADFFVVAAKTRTDVPGARGFSVFVVDRDTPGVTVGRKEHKMGVRGLPVHQVIFEDVEV 219

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G  N     +      +    A   +     +L   + YAR R   G  LI+  
Sbjct: 220 PVSSLVGQENEGFKLIMQNLNAVRPVVAARGLGLAEGALMYWLEYARTRQTFGRPLIEHQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++   A++A +I A   L++R A+  D+ +   E A        + K    ++A     
Sbjct: 280 GLQWMAAELAAEIEACRLLTYRAASLVDQGRVGREAA----HFLSMAKLKATELAVKAAN 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           + ++ +G  GY+E+  +AR  R++   +I+ G+       +   L  G
Sbjct: 336 DCLQMMGAVGYMEDYPMARFVRDARQLTIVEGTSQIQKGIIGRALADG 383


>gi|33595881|ref|NP_883524.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565960|emb|CAE36511.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 418

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 130/376 (34%), Gaps = 33/376 (8%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
             +  PA  A +      GL  +     +             AR           +MS  
Sbjct: 69  HEKTDPAIFAEMG---ELGLLGATIPTEYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQ 125

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E+                 GLTE   G+D   +
Sbjct: 126 SSLVMVPINEFGSEAQKRKYLPKLAAGEW-------------IGCFGLTEPNHGSDPGGM 172

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  DG        W  +SP++D F++ A+  G      +   + +    GL    
Sbjct: 173 ETRATKTPDGYKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKIRGFILEKGMKGLSAPA 232

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +  K+G R++ T E+         + +  +  G          L+SA   ++   +  AE
Sbjct: 233 IHGKVGLRASITGEIVMDEV---EVSEEQMMPGVSGLKGPFTCLNSARYGIAWGALGAAE 289

Query: 335 AIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           A  +  R     R   G  L    ++++ +AD+  +I        RL    D       E
Sbjct: 290 ACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKD-------E 342

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           +  A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ + 
Sbjct: 343 STAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDV 402

Query: 450 MVLDVLNLLEKGTNLF 465
             L +L   + G   F
Sbjct: 403 HAL-ILGRAQTGLQAF 417


>gi|312865846|ref|ZP_07726068.1| putative acyl-CoA dehydrogenase [Streptococcus downei F0415]
 gi|311098721|gb|EFQ56943.1| putative acyl-CoA dehydrogenase [Streptococcus downei F0415]
          Length = 379

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 124/361 (34%), Gaps = 27/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ--AHKIRAARLYLMAQLEAGHLMSPSVT-SASM 161
            + ++    GL        +  +      A  +  A  Y         +++  V  S ++
Sbjct: 36  EMWKKISEFGLLGLNIGEEYGGLAENYQTAATVYEALGYSCKNNGFIFVVNNHVWVSQNV 95

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  +  +   + P + + E                 + +TE   G+D  A+ +  ++ 
Sbjct: 96  IYLHGSKELKDKYIPVMVTGE-------------KKGAIAITEANSGSDAFAMVTTAKEE 142

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         +  + P++D FI+ A  +      L    + D    G+      +K+G 
Sbjct: 143 GDHYVLNGSKMFISNGPIADIFIVFAVTQQEPAKKL-TAFVVDRESEGVKVGPNIDKMGL 201

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHY 338
            +  T E+   N        L         +   I  +        V  M+  + + I  
Sbjct: 202 LACPTSEVVLENVKVPKENILGRLGSGSTILTQAIEWERCFEFAPHVGAMQRVMEDCIEQ 261

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  + D   +   IA++ + I  +  + +++A   D  K        A     
Sbjct: 262 AKTRKQFGKSIGDNQSISHKIAEMKIAIELSRLMLYKIAWLKDHQK-------MAYAEVS 314

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K +  +       +A++  G  GY +E  I R  R++ A++I  G+       +  + 
Sbjct: 315 IFKTYVSENYIKTCRDALQIFGAYGYTKEYDIERELRDALASTIYSGTNEMQRNTIYEMA 374

Query: 459 E 459
           +
Sbjct: 375 K 375


>gi|110635609|ref|YP_675817.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110286593|gb|ABG64652.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 395

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 147/401 (36%), Gaps = 46/401 (11%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP--- 126
            +E+AR    N   L    P   + D+ +  P    L+      GL        F     
Sbjct: 25  IREMARDVAEN---LVK--PLAAQIDEDDAFP--RELIEEFGRLGLIQLAVPEEFGGAGG 77

Query: 127 ------VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                 +VR++  ++ A+  +L     AG +M         + L +T  + + + P++ +
Sbjct: 78  RVTEMCLVREEISRVSASAAWLAGNNTAGGVMP--------LLLGSTEEMRRRYLPELAT 129

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++                + ++E   G+D++AI +   +  D         +  S P++
Sbjct: 130 GKH-------------LTCIAMSESDAGSDVSAIRTTAVRDGDHYVVNGTKTFISSGPVA 176

Query: 241 DAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
               +LA+      G   +     D S  G+   +   K+G R   T E+ F +      
Sbjct: 177 SFGTVLAKTGPVSAGKDAISSFFFDASWKGISVGKKDRKLGMRGTPTGEIRFEDVRIPAS 236

Query: 300 GDLNVSTGPVED--MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L    G      MK+L               R +   A+ Y + R   G  + D    
Sbjct: 237 HILGGGEGRGFALAMKVLNRNRPTVGAFGCGIARGAADYALAYTKERRAFGRAVYDFQAT 296

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           + A AD+ + I AA +L +R A   D      E       ++ + K +  +M   V   A
Sbjct: 297 RFAFADMYMQIEAARSLLYRTAYRLDSDPDAPE----TECLSAMAKCFASEMCMRVAISA 352

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ME +GG GY+ +  + R  R++ A   L G+     + ++ 
Sbjct: 353 MEQLGGHGYMVDHPLERMMRDAKALHFLEGTNQIARIVMMR 393


>gi|298249540|ref|ZP_06973344.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963]
 gi|297547544|gb|EFH81411.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963]
          Length = 383

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 147/402 (36%), Gaps = 31/402 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q +   A           P     D+    P    L++R    G       R
Sbjct: 2   DFSLNQEQQRVQEAARRFA--QEEVAPVARAADETGEFPMH--LVKRMGELGFLAGPVGR 57

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        ++ +    L  +     G L   +   A  +    +    +   P++ S 
Sbjct: 58  EYGGAGLDFVSYALLCEELGRVDASVRGFLTVHAGLVALCIQNWGSEEQKRRILPRLASG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E                   LTE   G+D A++ +  ++  D  Y L+G K ++++ +S 
Sbjct: 118 E-------------SIGCYALTEINAGSDAASMETTAREEED-SYVLNGEKIWITNGLSA 163

Query: 242 AF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTFGFLL 299
              I+ A ++  +    +   L +G+P G     + NK +G+R++    + F        
Sbjct: 164 TTTIVFATLDRGLRHKGICAFLLEGNPPGCQRDPMPNKELGHRASEHARITFKECRVPRS 223

Query: 300 GDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L     G    M  L    +  A  +V   +  L   + Y R+R   G  L D  +++
Sbjct: 224 ALLGEAGQGFAIAMSALECGRIGVASGAVGIAQACLDACVDYTRQRRQFGQRLADFQMLQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A DI AA  L++R A + D           A     I K +  + A    +EA+
Sbjct: 284 GTLADMAADIEAARLLTYRAAWTKDRDLP-------ATRATSIAKLFATEAAMRAASEAV 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              G  GY  E  + RHYR+     I  G+ +   + +   L
Sbjct: 337 LLHGNRGYSNEYPVERHYRDIKGLQIYEGTSHIQRVIIARDL 378


>gi|297199862|ref|ZP_06917259.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus
           ATCC 29083]
 gi|197710327|gb|EDY54361.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 385

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+     D  F       ++K  A      A+       S          
Sbjct: 40  RDFYYKLAELGIFGIRVDEEFGG-AGIDSYKFEAVMYEETARAGVQFGGSGVHVLLGLPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  S E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLATDEQKKRFLPKFVSAEEM-------------WALAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTSAPTAEDRRFGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAYGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAKQYVQERTVFGKPVASFQNTKFELAACQAEVDAAEAVVDRALEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  ++A  VI   ++  GG G++ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFATEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|268529192|ref|XP_002629722.1| Hypothetical protein CBG00953 [Caenorhabditis briggsae]
          Length = 387

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 54/379 (14%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P    ++R++   GL        +                        
Sbjct: 24  PNAAKFDESGEFP--WEIIRQAHSLGLMNPQIPEKYGGPGMTTLETTLIVEALSYGCTGL 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V +       K +                +    +     +TE   G
Sbjct: 82  QLGIMGPSLAIAPVYIAGNEEQKKKYL-------------GALAAEPIIASYCVTEPGAG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++ +K  +         W      +  F +LA+ +              + DG
Sbjct: 129 SDVNGVKTKCEKKGNEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDG 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------LIYLD 319
             +G+   + +  +G R + T  + F +       + NV   P    K+      +    
Sbjct: 189 DTSGITRGKKEKNMGQRCSDTRTITFEDVRVP---EENVLGPPGAGFKVAMSAFDMTRPG 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++      L E+  YA +R   G  + +   ++  ++D+A+++  A  ++++ A  
Sbjct: 246 VAAGALGLSWRCLDESAKYALQRKAFGTEIANHQAVQFMLSDMAINLELARLITYKSATD 305

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S  A+         K +    A    A A++  GG+G+  E  + +  R++  
Sbjct: 306 VDNGVRSSYNAS---------KCFAADTANQAAANAVQIFGGNGFNSEYPVEKLMRDAKI 356

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  +L
Sbjct: 357 YQIYEGTSQIQRIVISRML 375


>gi|284046093|ref|YP_003396433.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950314|gb|ADB53058.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 376

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/394 (20%), Positives = 137/394 (34%), Gaps = 30/394 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   +E+  +A     +  A  P    WD     P    +  +    GL  +       
Sbjct: 6   LTDEQREIRALARRFADE--AIAPHAAAWDHDHRFP--RGVFAQLGELGLMGACVPEQHG 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
                    + A      A       ++   ++  +  L   TP     W P        
Sbjct: 62  GAGTDFLSYVLALEELARADGGVAVTVAVHTSAVELPLLAHGTPEQVARWVP-------- 113

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P+ +        LTE   G+D  A+ ++              ++  +   +   I
Sbjct: 114 -----PLAQGFELGAFALTEPEAGSDAGALRTRADAEG---RITGAKQFITTGAQAHLLI 165

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ E   G   +   +     +GL   R + K+G  S++T  L F  T G  LG    
Sbjct: 166 VFARDESAGGE--ISAFVVKRPASGLAVAREEEKMGLHSSSTAALTFEQTPGERLGPAGA 223

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                        +  A  +V   + +L  A  YAR RH  GG +     ++  +A++  
Sbjct: 224 GMRIALGTLDGGRIGIAAQAVGIAQAALDVATAYARERHAFGGPIGRFGAIQEKLAEMQT 283

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I AA AL++R A         + E A A       K +  ++A     EA++ +GG GY
Sbjct: 284 EIEAARALTWRAARLKQAGLPHTVEGAQA-------KLFASRVARHWTGEAIQILGGYGY 336

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E    R+YR++    I  G+     L +   L
Sbjct: 337 TREFPAERYYRDAKVTEIYEGTSEIQRLVIARAL 370


>gi|158293343|ref|XP_314701.4| AGAP008602-PA [Anopheles gambiae str. PEST]
 gi|157016659|gb|EAA10182.4| AGAP008602-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 153/403 (37%), Gaps = 33/403 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   Q++ ++    + +     P     D+    P  H  + +    GL        + 
Sbjct: 37  LSKEHQQVQQLCRQFSER--ELKPAASAIDRNGTFPEQH--IAKLAELGLMRVTVAPLYG 92

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184
                                  G ++S      A+++  + T      +  K       
Sbjct: 93  GSGLDMLSLSLVVEELSRGCGSTGSIVSIHNCLYANLLHRLGTDDQRARFFNK------- 145

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243
                   ++       L+E   G+D+AA+T++  + +DG + L+G K W  S   S A 
Sbjct: 146 -------YESKTIGAFALSEAGAGSDVAAMTTRATRDADGSWILNGTKAWVTSGIESVAA 198

Query: 244 IMLAQVEGRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           I+ A V+  +    +   L D   G+  G+   R ++K+G R  +T +L   N       
Sbjct: 199 IVFATVDPALKYKGITAFLVDFDSGALAGVHRGRPEDKLGIRGTSTCDLMLENVRVPEAN 258

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L  V +G    M+ L    +  A  ++   + +L  A+ YA++R   GG LID P ++ 
Sbjct: 259 VLGTVGSGMRIAMEQLDRARIGIASQAIGIGQAALETAVEYAKQRTAFGGTLIDLPAVRT 318

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA++   +  A  L  + A   D     ++  + A+ +A  T  +             +
Sbjct: 319 RIAEMGTRLEMARLLVRKAAGEIDRGLRATKACSMAKWIAGETATYA-------AHGCQQ 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +GG GY++     R+YR++    I  G  +     V + + K
Sbjct: 372 ILGGMGYVKSLPAERYYRDARITEIYGGVTDVQKAIVADQIIK 414


>gi|302343873|ref|YP_003808402.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301640486|gb|ADK85808.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 387

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 142/408 (34%), Gaps = 32/408 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + LS     L   A           P  ++WD   + P +H  +      G   ++    
Sbjct: 3   FALSDELAMLREAARKFA--QEKIAPFADKWDAEHYFP-YHEAVLPMAELGFFGTVIPEE 59

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +          +  +     A       +    +  A  +    T R  + + PK+ S +
Sbjct: 60  YGGNAMGWLATMILSEEIARASSGLRVQVNLQELGCAHAILRHGTDRAKERYIPKLVSAQ 119

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +               G  +TE   G+D+ AI+S      D         W  ++P++D 
Sbjct: 120 W-------------LGGFAITEPNAGSDVMAISSVAVDKGDHFELSGAKTWISNAPVADC 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +  A  +   G   +   + D   N        +K+G+  + T E+            L
Sbjct: 167 VVFYAYTDRAAGSKGLSAFVVDLKDNPAVRVSTLDKLGSHCSPTGEIVLDGARVPRENLL 226

Query: 303 NV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                    V        L +A   V   +  L +A+ YA  R   G  +    +++  I
Sbjct: 227 GRPGDGAKIVFGSLNQTRLQAAAGGVGLAQACLDQAVAYANSREQFGRPIAQNQMIQDQI 286

Query: 360 ADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           A +A ++  A  L +R A   D+ +     E A A+  A      C +       +AM  
Sbjct: 287 ARMATEVECARLLVYRAAWQKDQGRLDNGREVAMAKYKAGEVAAMCAE-------QAMRI 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN----AMVLDVLNLLEKGT 462
           +G  GY  E  +AR++R++P   ++ GS N     + LD L L + G 
Sbjct: 340 LGAYGYSTEYPVARYHRDAPTYYMVEGSANICKWIVALDELGLRKAGR 387


>gi|325676114|ref|ZP_08155795.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553024|gb|EGD22705.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 391

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 128/362 (35%), Gaps = 26/362 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMT 166
           ++S   GL      + +  +    A  +  A  +    L       + +  +  ++    
Sbjct: 47  QQSRDMGLFGYAIPQEWGGLGLDLAQDVELAMEFGYTTLALRSMFGTNNGIAGQVLVGFG 106

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      W   I S              +V     LTE   G++ A + ++ ++      
Sbjct: 107 TDEQKARWLDGIASG-------------AVVASFALTEPGAGSNPAGLRTKAERSGGEWV 153

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                ++  ++P++D F++ A+          +   L      G+       K+G     
Sbjct: 154 LDGEKRFITNAPIADLFVVFARTRPADEKGPGIAVFLVPADTPGVTVGAKDAKMGQEGAW 213

Query: 286 TVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           T ++ F          + G+ ++             +  A ++V   + +L E++ YA  
Sbjct: 214 TADVHFDGVRVPDTALVGGNEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVAYAAT 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
               G  + +  +++  IAD    + A  AL    A ++   + R       RI   + K
Sbjct: 274 ATQGGTPIGNFQLVQAMIADQQTQVMAGRALVRDAARAWVSGEDR-------RIAPSVAK 326

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +C +MA  V   A++  GGSGY+ E  + R YR+     +  G+     L +   L K 
Sbjct: 327 LFCTEMAGRVADLAVQVHGGSGYMREVPVERIYRDVRLLRLYEGTSEIQRLIIGGGLVKE 386

Query: 462 TN 463
             
Sbjct: 387 AQ 388


>gi|227819568|ref|YP_002823539.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227338567|gb|ACP22786.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 395

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 145/412 (35%), Gaps = 49/412 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A        +L        R  + +  PA    +      GL       
Sbjct: 23  ERMIRDTARAYAEE------RLQPRVIEAYR--EEKTDPAIFREMG---ELGLLGVTVSD 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++  V     A+ + A  +  +       +   S      +    +    + + PK+ S 
Sbjct: 72  TYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVIYPIFAYGSEEQKQKYLPKLISG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D A + ++  K  DG   +    W  ++P++D
Sbjct: 132 EW-------------IGCFGLTEPDAGSDPAGMKTRAIKTEDGYRLIGSKMWISNAPLAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
            F++ A+ E       +   + +    GL   ++  K+  R++ T E+   N       L
Sbjct: 179 VFVVWAKSEAHGNA--IRGFVLEKGMKGLSAPKIAGKLSLRASITGEIVLDNVEVGEEAL 236

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
           L D+    GP         L+ A   +S   +  AE   +A R     R      L    
Sbjct: 237 LPDVEGLKGP------FGCLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + ++ +AD+  +IA     S R+    DE +        A  M  + K   C  A  +  
Sbjct: 291 LFQKKLADMQTEIALGLQGSLRVGRLMDEGR-------MAPEMISLVKRNNCGKALDIAR 343

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 344 MARDMHGGNGISEEYQVMRHMLNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|296269835|ref|YP_003652467.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092622|gb|ADG88574.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 403

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 135/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++  +   GL+   +              +    L+       
Sbjct: 28  PAAAEWDEREETP--WPIIEEAAKIGLYSLDFFAQQWFEETGLGLPVAFEELF-WGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  +A+ VA   TP    +W P++F    D                  +E   G
Sbjct: 85  GLSIVGTGLAAAAVAANGTPEQMGEWLPEMFGSPGD----------VKLGAFCASEPDAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++       D         W  +  +++  +++A V+  +G       +    
Sbjct: 135 SDVGAIRTRAVYDEAKDEWVLNGVKTWATNGGIANVHVIVASVDPSLGARGQASFVVPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST---------------GPVED 311
             GL   +   K G R++ T E+   N        L                   G    
Sbjct: 195 TKGLSQGQKFKKHGIRASHTAEVILDNVRVPGRCLLGGKEKLDERLARVRAGQRAGGQAA 254

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+         A M+V   R +   A  YA+ R   G  + +   +   +AD+A  I  A
Sbjct: 255 MRTFETTRPQVAAMAVGIARAAYEYARDYAKEREQFGRKIGENQAIAFLLADMAARIDMA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +++R A    + K  ++          ++K    + A  V  +A++ +GG+GY  E  
Sbjct: 315 RLMTWRAAWMARQGKPFTQA------EGSMSKLVAGETAVWVTEQAIQILGGAGYTREHP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   +
Sbjct: 369 VERWHRDAKIFTIFEGTSEIQRLIIGRAV 397


>gi|299770986|ref|YP_003733012.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
 gi|298701074|gb|ADI91639.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. DR1]
          Length = 379

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 129/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASM 161
             L  R   +G  C      +        + +   +    A     A  +   +   +  
Sbjct: 37  RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFASLAVAIGGQNELVSPY 96

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  + T    + W PK+ + E             V   + +TE   G+D+ AI +Q    
Sbjct: 97  LQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQAILE 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +D  Y ++G K F+S+ +    I+L A+ + +     +   L D + +G+   R   KIG
Sbjct: 144 NDH-YRINGSKTFISNGLHADLIVLVAKTDPQAKAKGISIFLVDAALDGVKKGRSLQKIG 202

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T EL F +        LG+       +        L  ++M++  +  ++     
Sbjct: 203 LHAQDTAELFFDDVCVPTTQRLGEEGQGFAYLMQELPRERLSISMMALGSILGAIEITKD 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L      +  +A+  +   AA A   + A  + +          +    
Sbjct: 263 YVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHL-------LSVTQV 315

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +       VI + ++  GG GY++E  I+R + ++    I  G+   M   V   
Sbjct: 316 AALKCFITDAQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIMKEIVARE 375

Query: 458 L 458
           L
Sbjct: 376 L 376


>gi|163854570|ref|YP_001628868.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258298|emb|CAP40597.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 133/373 (35%), Gaps = 30/373 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGH 150
           ++ D+ +  P    +++R    GL      + +           R    +  +A      
Sbjct: 28  QQVDENDVIPE--PVVQRMRDLGLFGHSIPQEYGGAGLTTEELARVNIEVSQVATAFRAR 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  ++  +    TP   + + P + S               +     LTE   G+D
Sbjct: 86  FGGNTGIASESLVADGTPEQKRQYLPLLASG-------------QITGCFALTEPEAGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPN 268
             A+ ++  +     Y +SG K F+++ P++D F + A+ +    G   +   L +    
Sbjct: 133 ATALKTRAVRDG-AYYEISGRKCFITNAPIADLFTVFARTDPDSRGSAGISAFLVERDTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMS 324
           GL       K+G   +   E+            +      G    MK L    ++ A + 
Sbjct: 192 GLATPPAYRKLGQHGSPVGEVVLDRVRVHESAIVGGTEGRGFRTAMKALNKQRINLAGLC 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V      + E +  A  R   G  + +  ++++ IA+    + AA AL    A   D+  
Sbjct: 252 VGPAIRLVREMVRRAHERKQFGQAIGEFQLVQQMIAESNTAVHAARALVLETARKRDDGV 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EA+         K +  +M   V   A++  GG+GYI    + R YR+     +  
Sbjct: 312 DVTLEASM-------CKLFASEMCGQVADRAVQVFGGAGYIAGNVVERFYRDVRVFRLYE 364

Query: 445 GSGNAMVLDVLNL 457
           G+    + ++   
Sbjct: 365 GTSQIHIANIAKR 377


>gi|262201483|ref|YP_003272691.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262084830|gb|ACY20798.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 397

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 126/397 (31%), Gaps = 34/397 (8%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +A   T       P  +  +  + +P    ++      GL   +    +  +        
Sbjct: 18  LATVRTYVDREIIPAAQELEHTDTYPD--KIVADMRAMGLFGLMIPEEYGGLGESLLTYA 75

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                     +    +++     A M+    T    + + P++ + E             
Sbjct: 76  LCVEELARGWMSVSGVINTHFIVAYMIRQHGTDTQKQHFLPRMATGE------------- 122

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRV 253
           V     ++E   G+D+AAIT+  ++  D         W  +   S     L + +     
Sbjct: 123 VRGAFSMSEPDLGSDVAAITTTARRAGDDYVINGQKMWLTNGGSSTLVAALVRTDEGADK 182

Query: 254 GCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLN 303
               +   L +          GL       K+G +   T EL F +        L G   
Sbjct: 183 PHHNLTTFLIEKPAGFGEVLPGLTIPGKIPKMGYKGIDTTELIFDDHHTRADTILGGTPG 242

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                + D   +  ++ +  +    + +   A+ YA++R   G  + +   +  ++A++A
Sbjct: 243 RGFAHMMDGVEVGRVNVSARACGVAQRAFELAVAYAQQRRTFGKPIAEHQAVAFSLAEMA 302

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + A   +    A   D  +     A  A+ +       C +    V   +    GG G
Sbjct: 303 TKVEAGHLMMVNAARLKDTGERNDVAAGMAKYL-------CSEYCAEVTQASFRIHGGYG 355

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y  E  I R  RE+P   I  G+       +   L +
Sbjct: 356 YSTEYEIERLMREAPFLLIGEGTSEIQKQIISRGLLR 392


>gi|18313372|ref|NP_560039.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160902|gb|AAL64221.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 378

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 29/375 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+  +      ++R+              F          I        A     
Sbjct: 24  RARDIDRGAYP---RDIIRKLGELNFLAPTLPPEFGGAGADTLTHILVVEELARASPGVA 80

Query: 150 HLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +M   S   A  +    T R+ ++  PK+ + E             V +   L+E   G
Sbjct: 81  TIMEIQSSMIAENIYHNGTKRMKEEILPKVAAGE-------------VIVAFALSEPCCG 127

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSP 267
           +D AAI ++ +KI           W  S   +D +++ A+          +   L   S 
Sbjct: 128 SDAAAIRTRAEKIGGEWVINGHKMWITSGLYADYYLLFARTGPLEARHKAITAFLIPRS- 186

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           N +    ++  +G R   T E++F++       ++G++N           +  L+   + 
Sbjct: 187 NCVEATPIE-VMGVRGTGTAEVKFNSCKAGDEDVVGEVNGGWSVAMWGINMGRLNVGAIG 245

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +  +A  YA +R   G ++ D   ++  +A++   + A  AL ++ A   DE  
Sbjct: 246 LGIAEEAFYQAYDYAHKREAFGRLIADFQAIQHYLAEMYARVEALRALVYKTAKMRDENH 305

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     + A + K    + A      A++ +GG GY  +  +   YR++    I  
Sbjct: 306 PD------FPLYAQVAKLMGSRTAVETARLAVQILGGYGYSTDSHVEMLYRDAKVTEIYE 359

Query: 445 GSGNAMVLDVLNLLE 459
           G+   ++  +   L+
Sbjct: 360 GTNEIILNTIYKFLK 374


>gi|88704323|ref|ZP_01102037.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701374|gb|EAQ98479.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 390

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 136/374 (36%), Gaps = 29/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E WD+    P    L  ++   GL    +  ++   +              M +   
Sbjct: 36  PFAEDWDEAGEIPM--DLWPKAAAVGLLGMGYPEAYGGTLEGIDSWHSWISGEEMNRFGV 93

Query: 149 GHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G + +  +        V    +  + +  AP + + E               I LG+TE 
Sbjct: 94  GGVPASLLVHGIGLPPVINWGSEAMKEAIAPPVLAGEKH-------------ISLGITEP 140

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D+A + +   +  D  Y ++G K +++  M   ++  A   G  G   V  LL   
Sbjct: 141 GGGSDVARLRTTAVRDGDH-YIVNGSKTYITGGMRANWVSTAVRTGGEGAGGVSMLLIPT 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G     L  K G  ++ T  L F N       L+G+ N     +        +  A+
Sbjct: 200 DAPGFSRTALDRKQGWWASDTATLYFDNVRVPVENLIGEENRGFIVIMTNFNSERMAMAV 259

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +  RV L EA  +AR R+  G  L D  V++   A +   + A  A       S + 
Sbjct: 260 SMEAQGRVCLEEAATWARERNTFGKRLADHQVIRHKFAQMKQKLNATQAYIRSCYESIEN 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 + A  ++ A  T  +C         EAM+ +GG+GY+    + R YRE   N+I
Sbjct: 320 GNPNPGDIALLKVQASETLEFC-------AREAMQILGGTGYMRGNRVERIYREVRVNAI 372

Query: 443 LLGSGNAMVLDVLN 456
             GS   M      
Sbjct: 373 GGGSEEIMRDLAAR 386


>gi|119718773|ref|YP_925738.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539434|gb|ABL84051.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 22/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R +   GL    +              +        A   +       + +     
Sbjct: 44  RELHRAAAKQGLLGISFPEEVGGGGGDVLDSVELQEGMFEAGASS------GLMAGLFTG 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P +    +P +  R   PT             LG+TE  GG+D+A I +  ++  D
Sbjct: 98  GIALPHIAAHGSPDLVDRFVRPTL-----AGEKIGALGVTEPGGGSDVAGIRTTARREGD 152

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            +Y ++G K F++S +   F+  A   G  G   +  L+ +    G    R   K+G   
Sbjct: 153 -VYVVNGAKTFITSGVRGDFVTTAVRTGPDGHAGLSLLVIEKGAPGFTVDRALTKMGWHC 211

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +       L+G+ N     + +  ++  L  A+ +      SL     Y R
Sbjct: 212 SDTAELSFVDVEVPVANLVGEENAGFYYIAEQFVVERLALAVHAYGIAARSLELTAAYCR 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  LI   V++  + ++   +  A A +  +A      +S   E   A+  A   
Sbjct: 272 DRETFGRPLIANQVVRHKLVEMRRQVEVARAYAREVARRHAAGESVIAEVCLAKQTA--- 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               C  A  V  +A++  GG+GY+    + RHYR++    I  G+   +      LL
Sbjct: 329 ----CDAATYVCDQAVQLHGGTGYMHGTEVERHYRDARILPIGGGATEVLTDLAAKLL 382


>gi|237798206|ref|ZP_04586667.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021058|gb|EGI01115.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 600

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 93/505 (18%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  +     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----EAGFLNASRNFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++    +    + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +  +DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAADGTYRLRGNKIFISGGDHSLSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ + +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFMVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +          ++ YAR R   G         
Sbjct: 277 GYLVGKAHQGLSYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R +      ++ 
Sbjct: 336 SKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKQAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTQGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      +     I  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISGTCERAQAHAPIDELRQPLEQLVARLQAVTLGLLTDMAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   +   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIVGWRWLE 540


>gi|197121603|ref|YP_002133554.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196171452|gb|ACG72425.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 385

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 134/374 (35%), Gaps = 28/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P G  WD+    P   AL RR    GL                 + +  A      +   
Sbjct: 32  PHGREWDEAGSFP--RALFRRFGELGLFGIRQPPEVGGSGLDWWYVVAYAEELARCRNAG 89

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++     +  ++  + T    +++              AP  +      L ++E  
Sbjct: 90  LAVSMLVHGEMAIPVIGELGTEAQRREFL-------------APAVRGERVAALAISEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+AAI +  ++    +       W  +   +D F+ LA   G  G   +  LL    
Sbjct: 137 AGSDVAAIRTTARRDGADLVVNGSKMWITNGARAD-FLTLAVRTGEAGHGGLSLLLFPTD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIM 323
             G    R   K+G  S+ T  L F          L         V        L +A+ 
Sbjct: 196 VKGFQVSRTLEKVGLPSSDTAVLFFEECRVPAANLLGEQDQGFYHVMANFQGERLVAAVQ 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+GM++ L +A+ Y   R   G  +      +  +AD    + AA  L++R A+     
Sbjct: 256 AVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLTAVEAARWLTYRAADLLARG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        A     + K + C++A  V  + M+  GG GY+ E  IAR +R+  A +I 
Sbjct: 316 EP-------AVREISMAKLFACELAQRVAYDCMQLHGGMGYVLESDIARAWRDVRAMTIA 368

Query: 444 LGSGNAMVLDVLNL 457
            G+   M   V   
Sbjct: 369 GGTSEIMRELVSRA 382


>gi|289616015|emb|CBI57114.1| unnamed protein product [Sordaria macrospora]
          Length = 413

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 126/371 (33%), Gaps = 42/371 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+ E      +++ +    G+        +          I               +
Sbjct: 79  RDMDEAEVMD--PSIVEQLFEQGIMGVEIPEEYGGAGMNFTSAIIGIEELARVDPSVSVM 136

Query: 152 MSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +    T  +   +   +  + K + PK+               T+      L+E   G+D
Sbjct: 137 VDVHNTLVNTAVIRWGSEALKKKYLPKL--------------ATNTVGSFCLSEPVSGSD 182

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             A+ ++  +   G        W  +S  +D FI+ A ++   G   +   + +    G 
Sbjct: 183 AFALATRAVETEHGYKINGSKMWITNSMEADFFIVFANIDPSKGYRGITAFIVEKGMKGF 242

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMR 329
              + + K+G R+++T  L F +         N+     E  K  I  L+   + +    
Sbjct: 243 SIAKKEKKLGIRASSTCVLNFDDVEVP---KENLLGKVGEGYKYAIGILNEGRIGIGAQM 299

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             LA                     +   IA    +IAAA AL +  A   +  +    +
Sbjct: 300 TGLALGAWEN--------------AVNDQIAQSYTEIAAARALVYNAARKKEAGEDFVMD 345

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +  ++A  V   A+E +GG G++ E    + +R+S   +I  G+ N 
Sbjct: 346 AAMA-------KLYASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNI 398

Query: 450 MVLDVLNLLEK 460
            +  +   L+K
Sbjct: 399 QLNTIAKTLQK 409


>gi|138895165|ref|YP_001125618.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|134266678|gb|ABO66873.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2]
          Length = 419

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 122/375 (32%), Gaps = 39/375 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +        H ++A  L  +A+         S   A  + 
Sbjct: 75  KELQLKAKEAGFWGINTPEEYGGANL--GHVMQAIVLMEVAKTLVPFQFGGS---ADNIL 129

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K +               P           +TE   G+D   I     K  D
Sbjct: 130 YYANEEQKKKYLI-------------PTINGEKKSCFAMTEPGAGSDTRNIKMTAVKDGD 176

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K F++    +D  +++A  +        G   V   + D            +
Sbjct: 177 E-WVLNGEKTFITGGNDADFVMVIAITDKERHQATNGREGVTCFIVDRDMG--WRSEPIH 233

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G   +    L F N        LG+L+       +            +V      L  
Sbjct: 234 TMG--PSTPASLIFENVRVPEENILGELHYGYKLGLEWIGYARWVVGARAVGTAERLLQM 291

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  + ++  ++  IAD A++I AA  L    A + DE +         R
Sbjct: 292 AIDYAKERVTFGKPIAERQAIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------R 344

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +A + K +   M   V+   M+  GG GY +E  I R YRE+    I  G+     L +
Sbjct: 345 HLASMAKLFGANMGNRVVDRVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLII 404

Query: 455 LNLLEKGTNLFEQLF 469
              L KG     Q  
Sbjct: 405 ARNLIKGHVKLGQFL 419


>gi|29831823|ref|NP_826457.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29608940|dbj|BAC72992.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 385

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 131/365 (35%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+     D          ++K  A      A+       S          
Sbjct: 40  RDFYYKLAELGVFGIRVDEEHGG-AGIDSYKFEAVLYEETARAGISFGGSGVHVLLGLPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L+ T    K + PK  S E                 + +TE   G+D+A + +  +  
Sbjct: 99  IKLLATDEQKKRFLPKFVSGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +   + D    G    R  
Sbjct: 146 DDGTHYVLNGAKTFITGGVHADRMIVCARTSAPTKEDRRHGISLFVVDTKAEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +    EAA A
Sbjct: 266 FAKQYVQERVVFGQPVAAFQNTKFELAACQAEVDAAEAVVDRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  ++A  VI   ++  GG G++ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFATEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRVNRIYGGTSEIMKTI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|330951405|gb|EGH51665.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae Cit 7]
          Length = 600

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/504 (18%), Positives = 175/504 (34%), Gaps = 68/504 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA +A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAINAFL----EAGFFNASRDFDAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFADDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G  +     +  M     +   + +          ++ YAR R             
Sbjct: 277 GYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARERPQGRLPDSKSPDS 336

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I+   ++R +      +  A  L    +  FD+         R        ++ P
Sbjct: 337 KPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDRKHAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +        A++ +GG GY  E  + ++YR++  N+I  G+     LD+L   
Sbjct: 397 VVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA----- 509
           L + G    +QL   +    +   + + +  + +    L    +     L   +A     
Sbjct: 457 LAQNGGTGLKQLLRLISATCERAQTHQALDELRQPLQQLVARVQAATLGLLTDLAQGRIT 516

Query: 510 --LASSAAALYRAGMNDIADVFLE 531
             LA+SA  L   G   +   +LE
Sbjct: 517 STLANSALYLKAFGHTVVGWRWLE 540


>gi|294649711|ref|ZP_06727119.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824390|gb|EFF83185.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 379

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 140/376 (37%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRFGENGFLCVDVPEEYGGYGAPVQYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + T    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILEND-QYRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  G+   R   KIG  +  T EL F + +      LG+       +        L  ++
Sbjct: 188 TLEGVKKGRSLQKIGLHAQDTAELFFDDVYVPASQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    + A  +        +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQLNVTQVAALKC-------FITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V+  L
Sbjct: 361 YGGTNEIMKEIVVREL 376


>gi|330941649|gb|EGH44428.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 600

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 90/516 (17%), Positives = 176/516 (34%), Gaps = 68/516 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAIDAFL----EAGFLNASRDFDAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFADDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHMVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPAGVKGISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G  +     +  M     +   + +          ++ YAR R             
Sbjct: 277 GYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARERPQGRLPDSKSPDS 336

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I+   ++R +      +  A  L    +  FD+         R        ++ P
Sbjct: 337 KPVSIIEHADVRRMLLTQKTYVEGAFDLCLYASRLFDDTQTGESEDDRKHAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +        A++ +GG GY  E  + ++YR++  N+I  G+     LD+L   
Sbjct: 397 VVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA----- 509
           L + G    +QL   +    +   + + +  + +    L    + +   L   +A     
Sbjct: 457 LAQNGGTGLKQLLRLISATCERAQAHQTLDELRQPLQKLVARVQTVTLGLLTDLAQGRIT 516

Query: 510 --LASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
             LA+SA  L   G   +   +LE         +  
Sbjct: 517 STLANSALYLKAFGHTVVGWRWLEQAVRAEEGLSGG 552


>gi|297162301|gb|ADI12013.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 408

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 127/395 (32%), Gaps = 46/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW--DRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+   +   + F+P        +           
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKIGLYSLDFYAQQYFDPTGLGIPMTM---EELFWGDA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +  +A  V    T      W P ++                       +E  
Sbjct: 84  GIALSIVGTSLAAVAVLANGTEEQVGTWIPPMYG----------DANDVKVAAFCSSEPD 133

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+AA+ ++       D         W  +  ++   +++A V+  +G       +  
Sbjct: 134 AGSDVAAMRTRAVYDEAKDEWVINGTKTWVTNGGIAGVHVVIASVDPELGARGHASFVVP 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------------- 303
               GL   +   K G R++ T E+   +        L                      
Sbjct: 194 PGTPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDERLARARERARSGTE 253

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                               +V   R +   A+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 254 RGKNAAMATFEASRPAVGAQAVGVARAAYEVALEYAKNRVQFGRPIIDNQGIAFQLADMR 313

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +R +      +  +           ++K +  + A  V A+A++ +GG+G
Sbjct: 314 TRIDAARLLVWRASWMATAGRPFTAA------EGSMSKLFAGETAKTVTAQAVQILGGNG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 368 FTREYPVERMHRDAAIFTIFEGTSEIQRLVIARTL 402


>gi|326384314|ref|ZP_08205995.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196912|gb|EGD54105.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 378

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 120/369 (32%), Gaps = 26/369 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+ E    +   +  +    GL    +   +    +     ++            G  +
Sbjct: 31  VDEHEKAEKYPEGVFAKLGEAGLLSLPYPEEWGGGGQPYEVYLQVLEEIAARWAAVGVAV 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S    +   +    T    + W P++                +      L+E + G+D A
Sbjct: 91  SVHSLACHPLFAFGTREQQEKWLPEMLGG-------------ATVGAYSLSEPQAGSDAA 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+  + + + D         W     ++D + + A+     G   +   L      GL +
Sbjct: 138 ALACRAEAVGDDYRITGEKAWITHGGIADFYNLFART--GDGSKGISCFLVPDGTEGLSF 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R + K+G  +  T    +          +G                 L  A ++    +
Sbjct: 196 GRPEEKMGLAAVPTTSARYDGALVPAERRIGAEGQGLQIAFSALDSGRLGIAAVATGIAQ 255

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L EA+ YA+ R   G  +ID   +   +AD+A  + +A A     A   D     S  
Sbjct: 256 AALDEAVAYAKERETFGRKIIDHQGLGFLLADMAAAVDSARATYLDAARRRDAGLPYSR- 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A + K      A  V  +A++  GG+GY  +  + R  RE+    I  G+   
Sbjct: 315 ------NASVAKLVATDAAMKVTTDAVQVFGGNGYTRDFRVERFMREAKITQIFEGTNQI 368

Query: 450 MVLDVLNLL 458
             L +   L
Sbjct: 369 QRLVISRSL 377


>gi|153005734|ref|YP_001380059.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029307|gb|ABS27075.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 592

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 89/525 (16%), Positives = 177/525 (33%), Gaps = 48/525 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL-----------LRRSI 111
           EY++S   ++        T +        E++   E  P    L           +R++ 
Sbjct: 10  EYLISEATKDDVFTPEDFTEEQRQIARTAEQFVDEEVRPVLERLEHQEPGLAVALMRKAG 69

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL       ++  +   +A  + AA         +    + S      +    T    
Sbjct: 70  EAGLLMIDAPEAYGGLALDKATSMLAAERMGAGGAFSVSYAAHSGIGTLPLVYYGTEAQK 129

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG 230
             +  K+ + E+             +    LTE   G+D     +      DG  Y L G
Sbjct: 130 DRYLGKLVTGEW-------------SAAYCLTEPEAGSDALGGKASATLSPDGRHYLLEG 176

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+++   +D F + A+V+           L + +  GL     + K+G + ++T  +
Sbjct: 177 TKQFITNGSFADLFTVFARVD----RKHFTAFLVERTTPGLTVGPEEKKLGIKGSSTTSV 232

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F      +   LG++        ++  +             +++L     YA  R   G
Sbjct: 233 IFEGAQVPVENVLGEIGKGHKIAFNVLNVGRFKLGAAVTGAAKLALGTGAAYANARKQFG 292

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRSEEAAYAR 394
             +     ++  +AD+   + AA +L +RLA   D+             ++  +      
Sbjct: 293 VPIARFGAIQEKVADLTAALFAAESLVYRLAGLIDDRLATIPKDTPGYYEAYQQGIEEYA 352

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I   + K +C ++   V+ E ++  GG G+I+E    ++YR+   N I  G+     L V
Sbjct: 353 IECAVAKVFCSEVLADVVDEVVQIHGGYGFIQEYPAEKYYRDERINRIFEGTNEINRLLV 412

Query: 455 LN-LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
              +L +       L   + + + +     +     S     E   L       + LA +
Sbjct: 413 PGTILRRALKGELPLQREVAKAMDALLSPSLDDADPSRPFAAERAALGGLKRTFLVLAGA 472

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           A   ++  + D  +V L     D       +      A  I   L
Sbjct: 473 AVQRHQDALKDEQEVLLA--LADVAIQVFAIESALLRAERISPRL 515


>gi|269955842|ref|YP_003325631.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304523|gb|ACZ30073.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 388

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 145/382 (37%), Gaps = 40/382 (10%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +   GE  D+          +R +   GL        F        ++ R+     + 
Sbjct: 31  EQWDRDGE-VDR--------NTMRAAAEHGLVGLSVPEDFGGGGMLMDYRFRSVVNEEII 81

Query: 145 QLEAGHLMSPSVT-----SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +   G  ++ +       +   +A   T    + W P++ + E             V   
Sbjct: 82  RSGIGSPLAGAFGIQDDLAVPYLAHFGTDAQKQQWLPRMATAE-------------VLGA 128

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
           L +TE   G+D+ A+ +  +K+ DG Y ++G K F+SS   +D  +   +          
Sbjct: 129 LAMTEPGAGSDLRAVKTTAKKV-DGGYVVNGAKTFISSGKTADVVVTFVKTGEGNRPDAF 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKI-- 314
             +L +    G  + +  +K+G   + T EL F++ F      +      G ++ M    
Sbjct: 188 SLILVEDGMAGFEHSKTLHKMGFPGHDTAELSFTDVFVPDENLIGGVEGRGFLQLMMNLP 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           L  L    ++ +    +L   + Y   R   G  ++D    +  +A++A  + A  A   
Sbjct: 248 LERLSIGAVAAAVAEAALGWTLDYTTSREAFGQPIVDFQNTRFRLAEMATTVDAMWAFLD 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R    + + +  ++EAA         K+WC +    V+ + ++  GG GYI E  IAR +
Sbjct: 308 RAMTLYRQGELTADEAAK-------VKFWCTEREWEVLDQGVQLHGGYGYILEYPIARAF 360

Query: 435 RESPANSILLGSGNAMVLDVLN 456
            ++  + I  G+   M   V  
Sbjct: 361 VDARVHRIYGGTNEVMREIVAR 382


>gi|108804542|ref|YP_644479.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
 gi|108765785|gb|ABG04667.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 132/401 (32%), Gaps = 34/401 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +        +A     +  A  P   R D+ +  P  + ++ R    GL      + +  
Sbjct: 6   TAEQLRWRDLAREFAREEVA--PQAARLDREQRFP--YDIVARMADLGLMGLTVPKEYGG 61

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDP 185
                     A      A    G  M   V+          T    + +  ++       
Sbjct: 62  SGGDFVGYCMALEEVSRADTSVGITMEAHVSLGCAPFVAYGTEEQKERYLGEVIRG---- 117

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAF 243
                          GLTE+  GTD A   +  +            KW  +S   ++   
Sbjct: 118 --------GRRLWAFGLTEEEAGTDAAGTRTTARLEDGRWVINGSKKWITNSGTDITAGV 169

Query: 244 IMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++A+  E   G   +  ++      G        K G R++    L F +        L
Sbjct: 170 TIIARTGEREDGRPELTAIIVPQDTPGYTRGPGYEKTGWRASDQRPLYFEDCRVPAENTL 229

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
                       L  LD   ++V        +  L EA+  A+ R   G  + +   ++ 
Sbjct: 230 GERGRGFRQF--LATLDGGRVAVGALSVGLAQACLDEALRRAKERRQFGRAIGEFQAIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A++I  A  +  + A   D  +  S EA+ A       K +  + A     +A++
Sbjct: 288 KLADMAMEIELARNMVLKAAWLKDMGRPFSREASMA-------KVFASETAKRAADQAVQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG G++E  ++AR++R+   N I  G+       +   L
Sbjct: 341 IWGGEGFMETNAVARYWRQVKINEIGEGTSEINRQIIARSL 381


>gi|145592594|ref|YP_001156891.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145301931|gb|ABP52513.1| butyryl-CoA dehydrogenase [Salinispora tropica CNB-440]
          Length = 384

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 130/373 (34%), Gaps = 29/373 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D  E H   + ++ +    GL    +      +         A           A  L +
Sbjct: 30  DHYERHSFPYDVIHQMGKMGLFGLPFPEEHGGMGGDYFALCLALEELARIDSSVAITLEA 89

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    T      W P++                      GLTE   G+D   
Sbjct: 90  AVSLGAMPIYRFGTDEQRARWLPRLL-------------NGRALAAFGLTEPGFGSDAGG 136

Query: 214 ITSQGQKISD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPN 268
             ++         + ++G K F+++  +D    + +A V G    G   +  ++      
Sbjct: 137 TQTRAVLDESTEEWVINGSKAFITNSGTDITDLVTVAAVTGTRPDGSKELSTIIVPTGTP 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G       +K+G  ++ T EL F +        L     G  + ++IL    +  A ++V
Sbjct: 197 GFTVAPGYSKVGWTASDTHELTFDDCRVPAGNLLGERGRGFAQFLRILDEGRIAIAALAV 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  + E++ YA+ RH  G  +     ++  IAD+ L +  A    +  A      + 
Sbjct: 257 GLAQGCVDESVRYAKERHAFGRPIGANQAIQFKIADMELRVHTARLAYYDAAARMLAGEP 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +AA A++ A         +A     +A +  GG G++ E  +AR +R++    I  G
Sbjct: 317 FKRQAAIAKLHAST-------IAVDNARDATQIHGGYGFMNEFPVARFWRDAKILEIGEG 369

Query: 446 SGNAMVLDVLNLL 458
           +     + +   L
Sbjct: 370 TSEVQRMIIAREL 382


>gi|71653384|ref|XP_815330.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70880378|gb|EAN93479.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 148/398 (37%), Gaps = 40/398 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +E+  +A+    +     P   + D+   +P  H L + +   GL      + + 
Sbjct: 31  LSEQQKEVRDLAHRFAKE--KIIPVAAKLDQTMEYP--HDLFKEAWELGLINMHIPQEYG 86

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    +                   +  S + V +       K +  ++       
Sbjct: 87  GFGASCLEGVIVHEELSWGCSGISTAFEANNLSQAPVIIAGNDAQKKKFLGRML------ 140

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+AAI +  +K  D         W  +  +++ + +
Sbjct: 141 -------EEPLKSAYCVTEPGAGSDVAAIKTFAKKKGDAYVVNGQKMWITNGGVANWYFL 193

Query: 246 LAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           LA  + G +G       + D +  G+   + +  +G R + T  + F +    ++ + NV
Sbjct: 194 LANSDEGFIG------FVVDANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANV 244

Query: 305 STGPVEDMKILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P +  KI +          AI +V+  + ++ EA  YA +R   G  + +   +   
Sbjct: 245 LGKPGDGFKIAMRAFDFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFM 304

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L++R A   D+ +S +         A   K +  +     +  A++ 
Sbjct: 305 LADMAAGIEAARLLAYRAAWEVDQGRSNT-------YYASSAKLFAAEHCERCVTAAVQI 357

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG+G+     + + YR++   SI  G+     L +  
Sbjct: 358 FGGNGFNTGYPVEKLYRDAKIFSIYEGTSQIQRLVISR 395


>gi|117928415|ref|YP_872966.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648878|gb|ABK52980.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 391

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 68/348 (19%), Positives = 129/348 (37%), Gaps = 24/348 (6%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +    +     ++       A L  G  +S  + +   +A   T      W P +
Sbjct: 51  PYPARYGGGEQPAVAYLQILEELSRAWLTVGLGVSVHLLACYPLARFGTDEQRDRWLPAM 110

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                            +     L+E   G+D AA+ +Q +  + G        W   S 
Sbjct: 111 IGG-------------GLLGAYCLSEPHAGSDAAALRTQAEPTAAGYRLSGTKAWITHSG 157

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
            +D + ++A+         +   L      GL     + K+G R++ T +L  ++     
Sbjct: 158 HADFYTVMARTSPDR-DHGISCFLVSADAPGLQAGVPERKMGLRASPTAQLHLADVVVEP 216

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G              +  L  A  +    + +L  A+ YA +RH  G  + +   +
Sbjct: 217 SRRIGAEGEGLRIALAALDVGRLGIAACATGLAQAALDAAVDYAAQRHQFGRPIREFQGV 276

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A++   +AAA A     A S D  +  + +AA       I K  C   A  V  +A
Sbjct: 277 AFLLAEMTAAVAAARATYLAAARSLDAGRVVTRDAA-------IAKLICSDTAMRVTTDA 329

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           ++  GG+GY+E+  + R++RE+ A  I+ G+     L +   L + T 
Sbjct: 330 IQIFGGAGYVEDYPVERYFREAKALQIVEGTNQIQRLVIARTLGRDTA 377


>gi|240168800|ref|ZP_04747459.1| acyl-CoA dehydrogenase FadE25_2 [Mycobacterium kansasii ATCC 12478]
          Length = 403

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 130/389 (33%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +              + A           
Sbjct: 28  PAASEWDEREETP--WPVIQEAAKVGLYSPDFFGQQAAEP-TGLGMLTAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP     W P++F    DP                 +E   G
Sbjct: 85  ALSIMGTGLAAAALAANGTPEQLGRWLPEMFGTADDP----------KLGAFCSSEPDAG 134

Query: 209 TDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++ +               W  +  +++  I++A V   +G       +    
Sbjct: 135 SDVGAIRTRARYDEAAAEWVLNGTKTWATNGGIANVHIVVASVYPELGTRGQATFIIPPG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------------STGPVED 311
             GL   +   K G R++ T E+   +        L                 S G    
Sbjct: 195 TKGLAQGQKFKKHGIRASHTAEVTLDDVRLPADLILGGREKFEARIARAKSGASVGGQAA 254

Query: 312 MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA
Sbjct: 255 MKTFERTRPTVGAMAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKSRIDAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R        +      ++      + K    + A  V  EA++ +GG+GY  +  
Sbjct: 315 RLLVWRAGWMARNNQ------SFDSAEGSMAKLVASETAVYVTDEAIQILGGNGYTRDYP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   L
Sbjct: 369 VERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|269126209|ref|YP_003299579.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311167|gb|ACY97541.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 382

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 142/375 (37%), Gaps = 34/375 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AG 149
           G+ +++ EF    + ++ +    GL    +   +  +         A           A 
Sbjct: 30  GDLYERGEFP---YQIVAKMGEMGLFGLPFPEEYGGMGGDYFALCLALEELARVDSSVAI 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +     A  +    T    + W P++ S E                  GLTE  GG+
Sbjct: 87  TLEAAVSLGAMPIYRFGTEEQKRRWLPQLCSGE-------------RLAAFGLTEPGGGS 133

Query: 210 DI-AAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGS 266
           D+   + +   ++ DG + ++G K F+++  +D  AF  +A + G      +  +L    
Sbjct: 134 DVPGGMRTTA-RLEDGHWVINGSKAFITNSGTDITAFTTVAALTGE---REISTILVPNG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    R  +K+G  ++ T EL F++        +     G  + ++IL    +  A +
Sbjct: 190 TPGFTVGRKYSKVGWAASDTRELSFADVRVPQENLVGERGRGYAQFLQILDEGRIAIAAL 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   +  + E + Y R+R   G  + +   ++  IAD+      A    +  A      
Sbjct: 250 SVGLAQGCVDECLRYVRQRQAFGRAIGEYQAIQFKIADMEARTHTARLAYYAAAAKMLAG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +EAA A++ A          A     EA +  GG G++ E  + R YR++    I 
Sbjct: 310 EPFKKEAAIAKLTASNA-------AMDNAREATQIFGGYGFMNEFPVGRFYRDAKILEIG 362

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 363 EGTSEVQRMLIARSL 377


>gi|54027305|ref|YP_121547.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018813|dbj|BAD60183.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 384

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 140/374 (37%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++    P    L +++   GL    +  S           +       M Q  A
Sbjct: 28  PYLDDWEREGEIP--RELHKKAGALGLLGIQFPESAGGAGGDALDSVIVCEE--MHQAGA 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  S+ +  +      P +       +  R   PT             L +TE  GG
Sbjct: 84  SGGLFASLFTCGI----AVPHIIASGNTDLIERFAKPTL-----AGEKIGSLAITEPGGG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  +T+  ++  D  Y ++G K +++S     F++ A   G  G   +  L+ +    
Sbjct: 135 SDVGHLTTTARRDGDH-YIVNGAKTYITSGCRADFVVTAVRTGGPGSAGISLLVVEKDTP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G R++ T EL + +       L+G  N  +  +    +   +  A+ + 
Sbjct: 194 GFTVSRKLDKMGWRASDTAELSYVDVRVPVENLVGQENSGSYQIAAAFVSERVGLAVQAY 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  +  L   + + R R   G  LI +  ++  + ++A  I  A   +  +A    E ++
Sbjct: 254 AQAQRCLDLTLEWVRNRETFGRPLISRQAVQNTVTEMARRIDVARVYTREVARRSAEGET 313

Query: 386 RS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I  
Sbjct: 314 DLIAEVCFAKNTAVEAAEW-------VAHQAVQLFGGLGYMRESEVERQYRDIRILGIGG 366

Query: 445 GSGNAMVLDVLNLL 458
           G+   +       L
Sbjct: 367 GTTEILTGLAAKRL 380


>gi|324999680|ref|ZP_08120792.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 400

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 120/368 (32%), Gaps = 35/368 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  EMGLFGLMIPEEYGGLGESLLTYALVVEEIARGWMSVSGVINTHFIVAYMLRQHGTQAQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCL 228
           + + PK+ + E                   ++E   G+D+AAI ++  + SDG       
Sbjct: 112 ERYLPKMATGE-------------TRGSFSMSEPDLGSDVAAIKTKAVESSDGSGDYVID 158

Query: 229 SGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP------NGLCYQRLKNKIG 280
               W  +   S+   +L + +         +   L +          GL      +K+G
Sbjct: 159 GAKMWLTNGGTSNLTAVLVKTDEGAEKAHQNLTTFLVEKPTGYGEVAPGLVIPGKIDKMG 218

Query: 281 NRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            +   T E+ F          L G+       + D   +  ++ A  +      +    +
Sbjct: 219 YKGVDTTEMVFKGHRVSGDQILGGERGKGFSHMMDGVEVGRVNVAARACGIAIRAFELGV 278

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA++R   G  +     +   +A++A  + AA  +    A   D  +    EA  A+++
Sbjct: 279 EYAQQRSTFGKPIAQHQAISFKLAEMATKVEAAHLMMVNAARLKDRGERNDVEAGMAKML 338

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        +    V  E+    GG GY +E  I R  RE+P   I  G+       +  
Sbjct: 339 A-------SEYCKEVTEESFRIHGGYGYSKEYEIERLMREAPFLLIGEGTSEIQKTIISR 391

Query: 457 LLEKGTNL 464
            L +   L
Sbjct: 392 GLLRDYKL 399


>gi|311899897|dbj|BAJ32305.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 380

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 113/341 (33%), Gaps = 25/341 (7%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   F    +     ++                S    +   +    TP   + W P++
Sbjct: 57  PYPEEFGGGGQPYEVYLQVLEELASRWAAVAVATSVHTLACHPLTAYGTPEQRERWLPRM 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E             +  G  L+E + G+D AA+  + + +  G        W     
Sbjct: 117 LAGE-------------LVGGYSLSEPQAGSDAAALNCKAEPVDGGYRITGTKAWITHGG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---F 295
            +D + + A+     G   V   L  G   GL +   + K+G  +  T    +       
Sbjct: 164 KADFYALFARTAP--GPHGVSCFLAPGRVEGLTFGPPEEKMGLNAVPTTAAYWDGALLER 221

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G                 L  A  +    + +L  A+ YA  R   G  ++D   +
Sbjct: 222 DRLIGAEGQGLPIAFSALDSGRLGIAACATGLAQAALDHAVAYANERTTFGRRIVDHQGL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  + ++ A     A   D  +  S +       A + K      A  V  +A
Sbjct: 282 GFLLADMAAAVDSSRATYLDAARRRDLGRPFSRQ-------ASVAKLVATDAAMKVTTDA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++ +GG GY  +  + R+ RE+    I  G+     L +  
Sbjct: 335 VQVLGGYGYTRDFPVERYMREAKIMQIFEGTNQIQRLVISR 375


>gi|118473137|ref|YP_889729.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174424|gb|ABK75320.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 382

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 134/374 (35%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L R++   GL  + +           A  +        A    
Sbjct: 26  PHAHEWERAGEIP--RELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPG 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G   S      ++  ++ +                  T   P  +      L +TE  GG
Sbjct: 84  GVYASLFTCGIAVPHMIASGDQR-----------LIDTYVRPTLRGEKIGALAITEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + ++     D  Y ++G K +++S +   +++ A   G  G   V  ++ D    
Sbjct: 133 SDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVSLIVVDKGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  + 
Sbjct: 192 GFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAY 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +G +  L   + + R R   G  LI +  ++  +A +A  I  A   +  +       ++
Sbjct: 252 AGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGET 311

Query: 386 RS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I  
Sbjct: 312 NLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGIGG 364

Query: 445 GSGNAMVLDVLNLL 458
           G+   +       L
Sbjct: 365 GTTEILTSLAAKTL 378


>gi|152989691|ref|YP_001351031.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150964849|gb|ABR86874.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S ++V    +      WA  +F           + 
Sbjct: 47  GKALAAGFYAFNMPEEVGGGGLDYLSQALVERELS---KVSWALHVFVARPSKILMACTG 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  +I ++  +  D         +   +  +D
Sbjct: 104 EQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V   L D    G+  +R    + NR   T E+ F +    
Sbjct: 164 FAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAAERKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  ++   A   D+      EA  A       K +  +    V  E
Sbjct: 284 VSFKLADMATQIRAAELMTLHTAWKMDQGTMTDGEAGMA-------KLFASETLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       V   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLR 382


>gi|169766142|ref|XP_001817542.1| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
 gi|83765397|dbj|BAE55540.1| unnamed protein product [Aspergillus oryzae]
          Length = 637

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 118/542 (21%), Positives = 213/542 (39%), Gaps = 70/542 (12%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD+ L   ++ +           +L  LGE  +S   +E +  A  + P +  +  
Sbjct: 23  NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82

Query: 90  GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+D  ++     W  L +     G+    ++ ++    R     ++    YL +   
Sbjct: 83  WGQRYDYDRLITSEGWKQLGKWGARHGVVSLGYEPTYGAERR----LVQYTVNYLYSPSS 138

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +    S++     AL+         A   F   Y        ++     G  +TE+ G
Sbjct: 139 GLYSCPVSMSDG--AALVLNQERKNVAADHPFQTAY--QKLISKKEDYWTSGQWMTERAG 194

Query: 208 GTDIAAITSQGQKI------------SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           G+D+    +                  +G Y ++G K+F S+  ++  +MLA+   G++ 
Sbjct: 195 GSDVQNTETWATYSPLSHKSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKLS 254

Query: 255 CFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            FL P     + EDG P    NG+   RLKNK+G +   T ELE  +    L+G ++   
Sbjct: 255 TFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHGV 314

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +  +    + I S++  R +++    +A+ R   G  L   P+    +AD+ +  
Sbjct: 315 MAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKARTTVGEPLWLIPMHLSLLADLEVKH 374

Query: 367 AAATALSFR----------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             A  L+F                  A+   + K   E     R +  I K    K A A
Sbjct: 375 RGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGK---EAQVVFRALTAIAKAVISKNAIA 431

Query: 411 VIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL- 464
            I E  E +GG GY++     E +IAR  R +  NSI  G+ N +  +++  L K  NL 
Sbjct: 432 GIQECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNLT 491

Query: 465 -----FEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDK---GLARFLTEKIALASSAA 515
                FE+  + +   +  S+ K++ +          E +     AR +   +A     A
Sbjct: 492 IFSAWFERTLALITTPEFASALKQIWSDFLSRTKATSEPRFILADARRVMFTLAWILCGA 551

Query: 516 AL 517
            L
Sbjct: 552 LL 553


>gi|311108193|ref|YP_003981046.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762882|gb|ADP18331.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 397

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 133/377 (35%), Gaps = 39/377 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SV 156
           +  PA  + +      GL  +     +             AR           +MS  S 
Sbjct: 50  QTDPAIFSEMG---ELGLLGATIPVEYGGAGLNYVSYGLIAREVERIDSGYRSMMSVQSS 106

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +    + + PK+   E+                 GLTE   G+D   + +
Sbjct: 107 LVMVPINEFGSEAQKQKYLPKLARGEW-------------IGCFGLTEPNHGSDPGGMET 153

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  K +DG        W  +SP++D F++ A+  G      +   + +    GL    + 
Sbjct: 154 RAVKTADGYKVSGNKMWITNSPIADVFVVWAKCVGGDFDGKIRGFILEKGMKGLSAPAIH 213

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G R++ T E+           ++  ++   GP         L+SA   ++   +  A
Sbjct: 214 GKVGLRASITGEIVMDEVEISADQMMPGVSGLKGP------FTCLNSARYGIAWGAIGAA 267

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +  R     R   G  L    ++++ +AD+  DI  A     RL    DE  +   
Sbjct: 268 EACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTDITLALQGCLRLGRMKDEGTA--- 324

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +
Sbjct: 325 ----AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHD 380

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 381 VHAL-ILGRAQTGIQAF 396


>gi|257076081|ref|ZP_05570442.1| isovaleryl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 374

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 133/376 (35%), Gaps = 31/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + D+  F P    L R+   +G         +         +         A    
Sbjct: 16  PVAAKMDRENFFP--RELFRKMGKEGYLGVTIPEQYGGSGSDYVSQAIIEEEISYASGSL 73

Query: 149 G-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G    + S      +    +  + + +  K+ S E+                LG+TE   
Sbjct: 74  GLSYGAHSNLCLDNLYRNGSEYLREKYLEKLCSGEH-------------VGSLGMTEPSS 120

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++ +                +  ++P +D F++ A+     G  + P  + + S 
Sbjct: 121 GSDALSMKTSATMDKGNFILNGSKTFITNAPYADIFLVYART----GENITP-FVVESSD 175

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--- 324
            G    +  +K G R + T  + F++        +    G    +   + L+ A+++   
Sbjct: 176 RGFSRGQEFDKTGMRGSPTGTIFFNDIILPENRIVGKLNGGRNVLLSGLNLERAVLAFNS 235

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L  AI YA  R   G  + D  +++  +A +     ++   +        EA 
Sbjct: 236 IGIARRALDLAIGYASERKQFGRPISDFELVQEKLAYMYTKFESSRLFAM-------EAL 288

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R +E     + A     +  + +  +  EA++  GG GYI++  I R +R+S   +I  
Sbjct: 289 KRVQEDRMDSLDAASAILYASESSEYIAREALQIFGGYGYIKDFEIERVFRDSILLTIGA 348

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       +   L K
Sbjct: 349 GTNEIRKKVISEALIK 364


>gi|158314760|ref|YP_001507268.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110165|gb|ABW12362.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 389

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 86/419 (20%), Positives = 145/419 (34%), Gaps = 44/419 (10%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           +A  PS +  E   L            A       P L      G         P   +L
Sbjct: 8   VARRPSWMDDETADLAALA-------RAFFEKEVVPALPEATKRG--------FPD-RSL 51

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            RR+   GL        +       AH+       +MA   + HL   +      +A   
Sbjct: 52  YRRAGELGLLGMGLPEEYGGGGGTFAHEAVLFTEQVMAGDNSLHLGVHAGIVPHYIAAYA 111

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +      W PK+ S E+                + +TE   G+D+ AI ++  +  D  Y
Sbjct: 112 SEENKSFWLPKLISGEW-------------IGAIAMTEPSTGSDLQAIKARAVQDGDD-Y 157

Query: 227 CLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLL--EDGSPNGLCYQRLKNKIGNRS 283
            + G K F+S+  +   +++A + +  +G   V  ++      P G    R+  KIG + 
Sbjct: 158 IIMGSKTFISNGHNADLVIIAVKTDPSLGARGVSLVVAEVGDDPPGFQRGRIIEKIGQKG 217

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL F          L G        + +      L  A+ +V+ +  ++A  I Y 
Sbjct: 218 QDTTELFFDGLRVPTSHLLGGVEGRGFAQLMEQLPQERLICAVAAVAAIERAVALTIDYT 277

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L D    +  +A+ A     + +         D+   +  + A     A +
Sbjct: 278 KTRTAFGKPLFDMQHTRFELAECATIARVSRSF-------LDDCIEQHLKGALDVTTAAM 330

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            KY+      AVI   ++  GG GY  E  I R Y ++    I  G+   M   +   L
Sbjct: 331 AKYYLTDQQCAVIDRCLQLFGGYGYTTEYPIGRMYTDARVQRIYAGANEVMKELISRSL 389


>gi|290960187|ref|YP_003491369.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260649713|emb|CBG72828.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 385

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 136/365 (37%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+     D  +       ++K  A      A+       S          
Sbjct: 40  REFYYKLADLGVFGIRVDEEYGG-AGIDSYKFEAILYEETARAGITFGGSGVHVLLGLPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V L+ T    K + PK  S E                 + +TE   G+D+A + +  +  
Sbjct: 99  VKLLATDEQKKRYLPKFVSGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+ +          +  L+ D    G    R  
Sbjct: 146 EDGTHYVLNGSKTFITGGVHADQMIVCARTDAPSAEDRRHGISLLVVDTKSEGYSIGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVENLLGEENKGFSYLGHNLASERWGIAYGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAKQYVQERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG G++ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|289647594|ref|ZP_06478937.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 600

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQHFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|300932557|ref|ZP_07147813.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 381

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 132/379 (34%), Gaps = 31/379 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QL 146
            P     D+    P  + ++R+    GL        F  +         A        Q 
Sbjct: 24  DPVAAEHDREHTFP--YDVVRQMGEMGLFGLPISEEFGGMGGDYMALCVALEELARVDQS 81

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  L +        +    T    + W P + +                  G GLTE  
Sbjct: 82  VAITLEAGVSLGIMPIYRFGTQDQKEKWLPDLVAG-------------KALAGFGLTESE 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLL 262
            G+D     +   K+ DG + ++G K F+++  +D    + +  V G+   G   +  ++
Sbjct: 129 AGSDAGGTKTTA-KLEDGEWVINGSKQFITNSGTDITKLVTVTAVTGQRDNGKKEISAII 187

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLD 319
                 G   +   NK+G  ++ T  L F+N        +     G  + + IL    + 
Sbjct: 188 VPSGTEGFVAEPAYNKVGWNASDTHPLTFNNVRVPEENLVGERGRGFAQFLSILEEGRIA 247

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A ++    +  + E++ YA+ R   G  + D   +   IA +      A       A  
Sbjct: 248 IAALACGAAQGCVDESVRYAKERTSFGKPISDYQAISFKIARMEARAWTARQAWHAAAEK 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               +  ++E       A I K  C + A     +A +  GG G++ E  ++RHYR+S  
Sbjct: 308 MVAGQDCAKE-------ASIAKMICSEAAMDNARDATQIHGGYGFMNEYRVSRHYRDSKI 360

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 361 LEIGEGTTEVQQMLIARHL 379


>gi|183220535|ref|YP_001838531.1| putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910645|ref|YP_001962200.1| isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775321|gb|ABZ93622.1| Isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778957|gb|ABZ97255.1| Putative acyl-CoA dehydrogenase, short-chain specific (SCAD;
           Butyryl-CoA dehydrogenase) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 394

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 143/395 (36%), Gaps = 34/395 (8%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR- 129
           Q +A  A              +  D+ E         R     G+               
Sbjct: 25  QSVASFAERE------LDEQAKENDETESFNHM-LFKRLGSELGIFGITVPEEDGGHGLD 77

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             A  I    +           ++  V   +     +       +  K+ + E+      
Sbjct: 78  PLASVIIHEEMSRFDPGFTLSYLAHEVLFVNNFFYSSNASQRSRYLSKVITGEW------ 131

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                    G+G+TE   GTD+  +T+Q  K  D        ++  +  +   F++  ++
Sbjct: 132 -------IGGMGMTEPGAGTDVLGMTTQAVKKGDRYIINGVKQYITNGSVGQVFVLYTKL 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +       +   + + S  G    + + K+G RS+ T +L F +        L V  G +
Sbjct: 185 DKN--AKKMTSFVVESSYKGFSVGKKEEKMGMRSSPTTQLVFEDMEVPEENLLGVENGAI 242

Query: 310 EDMK---ILIYLDSAIMSVSGMRVSLAEAIHY-ARRRHVSGGILIDQPVMKRAIADIALD 365
             M     +  +  A  S+   R  +     Y  R R   G  L++   ++R IA+   D
Sbjct: 243 THMMRNLEIERVTLAAQSLGIARRCVDIMCDYTVRHREAFGKKLMEFGQIQRLIAESYAD 302

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             AA AL +++A+        S  AA A+++A        +MA  V   A++ +GG GY 
Sbjct: 303 YQAARALVYQVASELGPDVRNSLGAASAKLVA-------TQMAERVSRNAIQVLGGYGYC 355

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            E  + R +R++   SI  G+  AM  ++ + L+K
Sbjct: 356 REYPVERLHRDAILLSIGGGTNEAMQKNIASDLKK 390


>gi|111020014|ref|YP_702986.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819544|gb|ABG94828.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 414

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 136/363 (37%), Gaps = 28/363 (7%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMT 166
           R++   GL      + +  +       +  A  +    L       + +  +  ++    
Sbjct: 70  RKAAEMGLFGYAIPQQWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLVNFG 129

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T     +W  +I S               V     LTE   G++ A +T++   + DG +
Sbjct: 130 TDEQKSEWLERIASG-------------DVVASFALTEPEAGSNPAGLTTRAV-LKDGKW 175

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F+++ P++D F++ A+          +   L      G+       K+G    
Sbjct: 176 TINGTKRFITNAPLADLFVVFARTRPADETGTGIAVFLVPADTAGVVVGPKDKKMGQEGA 235

Query: 285 ATVELEFSNTFGFLLGDLNV--STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
            T E+ F +        +      G    M  L    +  A ++V   + +L E++ +A 
Sbjct: 236 WTAEVAFDDVSVPESALVGGSEEAGYRAAMTSLARGRVHIAALAVGSAQRALDESVAFAA 295

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                G  + D  +++  +AD  + ++A  AL    A  +   + R       RI   + 
Sbjct: 296 VTKQGGTPIGDFQLVQAMLADQQVGVSAGRALVRDAAQKYVSGEDR-------RIAPSVA 348

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +C +MA  V   A++  GG+GY+ +  + R YRE     +  G+     L +   L +
Sbjct: 349 KLYCTEMAGKVADLAVQVHGGTGYMRDVPVERIYREVRLLRLYEGTSEIQRLIIGGGLVR 408

Query: 461 GTN 463
              
Sbjct: 409 EAK 411


>gi|116328457|ref|YP_798177.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331189|ref|YP_800907.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121201|gb|ABJ79244.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124878|gb|ABJ76149.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 376

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 136/376 (36%), Gaps = 35/376 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W+KV   P    + +++  +GL C      +        + +             
Sbjct: 28  PNHESWEKVGVVP--KEIWKKAGANGLLCPDIPVEYGGAGADFLYNVVVIEESSRVGNSG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +   A  V+        K W P   +                 + + +TE   G
Sbjct: 86  FFISLHNDVIAPYVSTYANEEQKKRWLPGCATG-------------DSILAIAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   + SD  Y ++G K F+S+      I+ A    +     +  L+ +    
Sbjct: 133 SDLKNIRTSAVEKSDH-YVVNGQKTFISNGQLANLIITAV---KHNNGTMSLLMVEEGMK 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           G    R   KIG ++  T EL +++         N+     +  + L+  L +  + +S 
Sbjct: 189 GFERGRRLEKIGLKAQDTSELYYNDVIVP---KENLIGKQGQGFRYLMQKLATERLVLSI 245

Query: 328 MRV---SLAE--AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   +L +   + Y + R   G  +     +K  +A++A ++        ++      
Sbjct: 246 AAVEATALVQKITLQYIKERQAFGKKIGTFQNIKFKMAEMATELEMCRTFVDKVTLETIA 305

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +S + EA+ A+        +  +M      E ++  GG GY+ E  IAR Y ++   +I
Sbjct: 306 GRSNTAEASMAKW-------YSTEMQKRHTDECLQFFGGYGYMMEYPIARAYLDARIQTI 358

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 359 YAGTTEIMKEIIGRSL 374


>gi|320321950|gb|EFW78046.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330944|gb|EFW86918.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330872175|gb|EGH06324.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 600

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCARAQGYDSLHELRQPLEQLVTHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLRVFGHTIIGWRWLE 540


>gi|329941600|ref|ZP_08290865.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329299317|gb|EGG43217.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 408

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 137/418 (32%), Gaps = 49/418 (11%)

Query: 70  AQELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRS 123
             EL+         LH +      P    WD+ E  P    +++ +   G++    + + 
Sbjct: 5   TMELSEEQREVRDWLHGFAADVIRPAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQ 62

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +            A              +  +  +A  V    T      W P+++    
Sbjct: 63  YFDPTGLGIPM--AMEELFWGDAGIALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG--- 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSD 241
                              +E   G+D+A++ ++       D         W  +  +++
Sbjct: 118 -------DANDVKVAAFCSSEPDAGSDVASLRTRAVYDEAKDEWVINGTKTWATNGGIAN 170

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             +++A V+  +G       +      G    +   K G R++ T E+   +        
Sbjct: 171 VHVVVASVDPELGSKGHASFIVPPGTPGCSQGQKFKKHGIRASHTAEVVLDDVRVPGSCL 230

Query: 302 LN--------------VSTGPVEDMKILI-------YLDSAIMSVSGMRVSLAEAIHYAR 340
           L                +    E +K                M+V   R +   A+ YA+
Sbjct: 231 LGGKEKLDERLARAREKAKQGGERVKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAK 290

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +ID   +   +AD+   I AA  L +R +      +  +           ++
Sbjct: 291 TRQQFGRPIIDNQGVAFQLADMRTSIDAARLLVWRASWMAVNGRPFTAA------EGSMS 344

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V A+A++ +GG+GY  E  + R +R++   +I  G+     L +   L
Sbjct: 345 KLFASETAKKVTAQAVQILGGNGYTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|301065038|ref|ZP_07205383.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300440887|gb|EFK05307.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 381

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 127/378 (33%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    ++ +    G                             A    
Sbjct: 26  PIAGEIDREARFP--WEVVEKMGKLGYFGIQAPVELGGGGLDSMSYAIIVEEISRASGSL 83

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G  ++   + A    L   +      WAP + S                     LTE   
Sbjct: 84  GLCVTVHNSVALYPILAFGSEEQIAKWAPPLASG-------------QKIGAFCLTEPNA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D + I        D     +   +  +  ++D  ++  +         +  ++ +   
Sbjct: 131 GSDASGIEGTAVADGDAYVVNTNKVFVTNGGVADICLLFLKTNPYDDPGEISVVVAERGT 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            G     L++  G R+N    +   +     L   N+       +KI L  LD+  M ++
Sbjct: 191 PGFVVGDLEDLCGMRANPVSSIRLYDCR---LSRENLLGRAGMGLKIGLATLDTGRMGIA 247

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +A+A     I YA++R      L     ++  IAD+   + A+  +++R A   D
Sbjct: 248 AQALGIAQAAMEEGILYAQQRRQFRVPLAKHQAIQMMIADMGTLVEASRLMTYRAAAFRD 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             KS S+E+A A       K +  +    V   A++  GG GY +  ++ R+YR++    
Sbjct: 308 AGKSFSQESAMA-------KLFASEACSKVTDMAVQIHGGYGYSKSYAVERYYRDARVTR 360

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  GS     + +   L 
Sbjct: 361 IYEGSSEVHRMVIARGLM 378


>gi|111018929|ref|YP_701901.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818459|gb|ABG93743.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 382

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 135/383 (35%), Gaps = 36/383 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  +   GE            AL R +   GL  + +  S           +     +
Sbjct: 26  PHLDDWERDGE---------LPRALHREAAELGLLGAGFPESVGGEGGDLVDAVLICEEF 76

Query: 142 LMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A    G   S   S  +   +A    P   + W               P  +  +   
Sbjct: 77  HQAGASGGAFASLFTSGIALPHLAAAGDPEQIEKWV-------------RPTLRGELIGS 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  + +   +  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLRTTAIRDGDH-YVVNGSKTFITSAVRADFVVTAVRTGGPGASGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ +    G    R  +K+G R++ T EL F +       L+G+ N     +    +  
Sbjct: 183 LLVIEKGTPGFEVARKLDKMGWRASDTAELSFVDARVPAANLVGEENSGFAQIAQAFLTE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + S  +  L   + + R R   G  LI +  ++  + ++A     A   +  L
Sbjct: 243 RIALAAQAYSSAQRCLDLTLQWVRDRETFGRPLISRQSVQNTVTEMARKTDVARVYTRAL 302

Query: 377 A-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              S    +    E  +A+  A     W       V  +A++  GG GY+ E  + R YR
Sbjct: 303 VERSLVSNEDFIAEVCFAKNTAVEAGEW-------VANQAVQLFGGLGYMRESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           +     I  G+   +       L
Sbjct: 356 DMRILGIGGGTTEILTGLAAKRL 378


>gi|158316068|ref|YP_001508576.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111473|gb|ABW13670.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 379

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 126/378 (33%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G     W++    P       ++   G+        +                   A
Sbjct: 23  KEIGAHYREWEEAGLPP--RDFYNKAGDVGILGLGIPEEYGGGGADFLFNAVVTEEAARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
               G L   +  S               W P + S E             +   L LTE
Sbjct: 81  GYALGPLRIHADISVPYFVDHGNEEQKTRWLPGLASGE-------------LVAALALTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A  T+  +   D  Y ++G K F++  + +D F+   + +       +  L+ 
Sbjct: 128 PGAGSDLAGFTTTARLDGDH-YVVNGSKTFITGGLNADLFLTAVKTDPTQRHAGLSLLVI 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
            G   G+      +KIG      VE+ F +       LLG+       +    +   L  
Sbjct: 187 PGDLPGVSRGAPLHKIGLHIQEAVEIFFDDVRVPVANLLGEEGQGFTYLTSHLVQERLSI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI +       + + + Y   R V G  L      K  +A  A ++ A  AL  ++  + 
Sbjct: 247 AINAQGAAASIVEQTVAYVNGRKVFGKTLNTFQNTKFVLAGCATEVEAGQALLDQVLLAH 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              ++   +AA         K +C +M   VI   ++  GG GYI E  +AR + ++   
Sbjct: 307 VTGEATPADAAM-------VKLYCTEMQGRVIDSCLQLFGGYGYINEYPVARAWADARVG 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS   M   +   L
Sbjct: 360 RIYGGSSEIMKTIIAKSL 377


>gi|291300500|ref|YP_003511778.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569720|gb|ADD42685.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 406

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 133/390 (34%), Gaps = 39/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++  +   GL+       F       +  I +  L+       
Sbjct: 30  PAASEWDEREETP--WPIIGEAAKIGLYGFEALAQFWADPTGLSLPIVSEELF-WGDAGI 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  +A+ +    TP    +W P+ F                       +E   G
Sbjct: 87  GLSIFGTSLAAAGIYSAGTPEQLAEWVPQCFG----------DADDVKLGAFCSSEPEAG 136

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D++A+ ++ +     D         W  +  ++   ++ A V+  +G       +    
Sbjct: 137 SDVSAMRTRARYDEATDEWILSGQKAWATNGGIAHVHVVTASVDPELGSRGQAAFVVPPG 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG----------------PVE 310
             GL       K+G R++ T ++   +        L                        
Sbjct: 197 TPGLSSPTKIKKLGLRASHTADVFLDDVRVPGRCLLGGKEKLDERLARARQPETRTKGQA 256

Query: 311 DMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+   L     A  +V   R +   A+ YA+ R   G  +ID   +  A+AD+  +I  
Sbjct: 257 AMRTFELTRPSVAAQAVGVARAAYEYALDYAKERVQFGRPIIDNQAVSFALADMRTEIDC 316

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A      K              ++K    ++A  V  +A++ +GG+G+  + 
Sbjct: 317 ARLLVWRAAWMGRNDKPFEA------GEGSMSKLKAGEVAIKVTEKAVQLLGGAGFSRDH 370

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R YR++   +I  G+     L +   +
Sbjct: 371 PVERMYRDAKIYTIFEGTSEIQRLVIARAI 400


>gi|167586291|ref|ZP_02378679.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu]
          Length = 395

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 140/405 (34%), Gaps = 38/405 (9%)

Query: 69  TAQELARMANYN--TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A       +L        R ++ +       + R     GL        +  
Sbjct: 20  EDERMVRDAARAYAQDKLAPRVTDAFRHERTDV-----GIFREMGELGLLGPTIPEQYGG 74

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                      AR           +MS  S      +    +    + + PK+ + E+  
Sbjct: 75  PGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPICEFGSDVQKEQYLPKLATGEW-- 132

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++
Sbjct: 133 -----------IGCFGLTEPNHGSDPGSMITRAKKVPGGYSLSGSKMWITNSPIADVFVV 181

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A++E   G   +   + +    GL    +  K+G R++ T E+   + F     + N  
Sbjct: 182 WAKLE-EDGRDTIRGFILEKGWKGLSAPVIHGKVGLRASITGEIVLDDVFVP---EENRL 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIA 360
                       L+SA   ++   +  AEA  +  R     R   G  L    ++++ +A
Sbjct: 238 PHVGGLRGPFTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLA 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I        RL    DE  +       A  +  I K   C  A  +   A + +G
Sbjct: 298 DMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           G+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 351 GNGISDEFCVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|281352180|gb|EFB27764.1| hypothetical protein PANDA_013839 [Ailuropoda melanoleuca]
          Length = 658

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 138/366 (37%), Gaps = 67/366 (18%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 159 ILLFGTKAQKEKYLPKLASGE-------------TIAAFCLTEPSSGSDAASIRTSAVPS 205

Query: 222 SDG-IYCLSGHKWFL------------------------------------SSPMSDAFI 244
             G  Y L+G K ++                                    +  ++D F 
Sbjct: 206 PCGKYYTLNGSKIWIRQSSPSPHFVSSSPPFPSFRPHCCPPHPDCPSFFHSNGGLADVFT 265

Query: 245 MLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           + A+    +   G     +   + +    G+ +   + K+G +++ T E+ F        
Sbjct: 266 VFAKTPITDAATGAAKEKITAFVVERGFGGVTHGPPEKKMGIKASNTAEVYFDGVRVPSE 325

Query: 300 GDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L  V  G    M IL       A      MR  +A+A+ +A  R   G  + +  +++
Sbjct: 326 NVLGEVGGGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHAANRTQFGEKIHNFGLIQ 385

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A+      ++++ ++ + D+       A   +I A I+K +  + A  V  E +
Sbjct: 386 EKLARMAMLQYVTESMAYMVSANMDQG------ATDFQIEAAISKIFGSEAAWKVTDECI 439

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474
           + +GG G+++E  + R  R+     I  G+ + + L V     ++KG  L   L + L+ 
Sbjct: 440 QIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSG-LGNALKN 498

Query: 475 DLGSSG 480
             G++G
Sbjct: 499 PFGNAG 504


>gi|163855420|ref|YP_001629718.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259148|emb|CAP41448.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 327

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 125/348 (35%), Gaps = 29/348 (8%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
             +    +            A   +  A      ++    +    +    +    + + P
Sbjct: 2   GMLVPDEYGGSGASFVEYCLAIEEFAAADAGFATIVHVHNSLGLTLMWSASEEQKRKYLP 61

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+ S E+                  LTE   G+D AA  +  ++     Y L+G K F+S
Sbjct: 62  KLASGEH-------------IGAFLLTEPHAGSDTAAFRTSARRDGTE-YVLNGSKQFIS 107

Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   +   I+LA  +   G       L D    G    R+++K G  +    ++E  +  
Sbjct: 108 NGSEAGLAIVLAVTDPTAGKRGKSLFLVDPKQPGYEVARVESKYGQHTAHLAQIELKDCR 167

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILI 350
                 +       +    L  L    ++++   V +       A+ YA+ R   G  +I
Sbjct: 168 VPAGNLIGAEGAGYQQTMAL--LSHGRVAIAAQAVGVARAALEAALRYAKDREAYGAPII 225

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   +   +AD+A+ +  A       A   D     ++EA+ A       K +  +MA  
Sbjct: 226 NLQAVSFDLADMAMHVEIAHQYVLHAARLVDANVPCAKEASMA-------KLFASEMAEK 278

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           V + A++  GG GY+++  + R+ R+     I  G+ +   L +   L
Sbjct: 279 VCSTALQLHGGYGYLKDFPVERYCRDVRVCKIYEGTSHIQKLIIARSL 326


>gi|330886281|gb|EGH20182.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 600

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQHFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|254384727|ref|ZP_05000065.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194343610|gb|EDX24576.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 385

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 133/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      ++       S      +   
Sbjct: 40  RDFYYKLGELGIFGINVPEEFGGAGLDT-HKFEAVLYEETSRAGVNFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++      K + PK  S E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLADDEQKKRYLPKFVSGEEM-------------WALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGSKTFITGGVHADRVIVCARTSAPREDDRRFGISLFAVDTKSEGYSIGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       L+G+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLMGEENKGFYYLGANLPSERWGIAFGAYAQAKAAIR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y   R V G  +      K  +A    ++ AA A++ R   + D  +  + EAA A
Sbjct: 266 FAQQYVTERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRALEALDAGELTAAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI + ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDKCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|119718824|ref|YP_925789.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539485|gb|ABL84102.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 408

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 129/395 (32%), Gaps = 40/395 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++  +   GL+   +  +           I    L+       
Sbjct: 31  PAAAEWDEREEFP--WPVVEEAAKVGLYSVDFIVTQALDETGLGFPITMEELF-WGDAGI 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  +A+ V    T     +W P ++             K         +E   G
Sbjct: 88  GLSIVGTSLAAAGVRANGTDEQVAEWIPAMYG-------APGDLK---LGAFCSSEPDAG 137

Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ A+ ++       D         W  +  ++D  ++ A V+  +        +    
Sbjct: 138 SDVGAMRTRATYDEAGDEWVLNGTKTWATNGGIADVHVVTAVVDPELRTRGQASFVVPPG 197

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-------VSTGPVEDMKIL---- 315
             GL   +  +K G R++ T E+            L              E  +      
Sbjct: 198 TKGLSQGQKFHKHGIRASHTAEVVLDQVRVPGRCLLGGKEKLDARLARAREGARSAGSSN 257

Query: 316 --------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                           ++   R +   A+ YA+ R   G  +I+   +   +AD+A  I 
Sbjct: 258 ASMATFERTRPAVGAQAIGIARAAYEVALDYAKTREQFGRAIIENQAIAFTLADMATSIE 317

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+  L +R A    + K   +          ++K +  + A  V  +AM+ +GG+G+  E
Sbjct: 318 ASRLLVWRAAWMARQGKRFEQA------EGSMSKLFAGETAVRVTGQAMQILGGNGFTRE 371

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             + R  R++   +I  G+     L +   +    
Sbjct: 372 YPVERMARDAKIYTIFEGTSEIQRLVIARSISGAP 406


>gi|193078422|gb|ABO13408.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 385

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+   P    W++    P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPNIP---EWEEAGCFP-IHDVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGRAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +  ++       +A + K    +++  V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLSREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|86139734|ref|ZP_01058301.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85823625|gb|EAQ43833.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 378

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 135/356 (37%), Gaps = 29/356 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            + R    GL  +        +            L L    E   + +  +    ++ ++
Sbjct: 42  FMTRLAEFGLTSAPHPEEAGGMGLDW-----TTHLMLF---EEVGVTAIDIALPILINVV 93

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
               +      K+ S E       P+    +   +G++E   G+D+AA+ ++ ++  D  
Sbjct: 94  AGEILL-----KLGSDEIRKKYIGPLLAGEITASMGISEPNVGSDVAAVKTRARRDGDDW 148

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  +   SD  I     +  +       +L D   +G   + +K K+G  + +
Sbjct: 149 VINGEKTWITNGRFSDFLICTCATDEGLTH-----ILVDRKEHGYETRDIK-KMGLNAQS 202

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T ++   +    +   +  V  G  + + +     +  A+  +S  R +L E+I YA+ R
Sbjct: 203 TAQIFLDDVRVPIANTIGEVGRGLQQTLVVFERARVHMAMWGISLARRALEESIRYAQER 262

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +  G  +    ++   IA +A +I AA  L+ R A   D  +   +E A A+        
Sbjct: 263 NQHGKQIAGHQLIADKIAVMATEIDAARLLTLRAAGMIDRGERCDKECAMAKW------- 315

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  ++A     +A++  GG+G   +  + R  RE+    I  G+     L +   L
Sbjct: 316 YGTEIAVNATRQAVQIHGGNGVTTDFIVERLAREAIIGPIPDGTTEIQKLLIARTL 371


>gi|50084877|ref|YP_046387.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|19068131|gb|AAL54851.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530853|emb|CAG68565.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1]
          Length = 379

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 128/374 (34%), Gaps = 29/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    +      +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RHIWNLLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETARAGFGS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  M +    K W PK+ S E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYIQNMGSEAQKKYWLPKMVSGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    ++  Y + G K F+S+ +    I+L A+ + +     +   L D 
Sbjct: 129 AGSDLQAIRTQAILKNEH-YVIDGSKTFISNGLHADLIVLVAKTDPQARAKGISLFLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
              G+   R   KIG  +  T EL F      +   LG        +        L  A+
Sbjct: 188 QLEGVEKGRSLKKIGLHAQDTAELFFDGVHVPVTQRLGQEGQGFAYLMQELPRERLSIAM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M +  +  ++     Y R R   G  L      +  IA+  +   AA A     A  + +
Sbjct: 248 MGMGSIWGAIDLTTSYVRERKAFGQTLAQLQNTRFVIANAQIKAKAAQAFIHECAQMYHQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                   A         K +       VI + ++  GG GY++E  I+R + +S    I
Sbjct: 308 G-------ALTVGHVAALKCFITDTQCDVIDQLLQLFGGYGYMQEYPISRFFVDSRVQKI 360

Query: 443 LLGSGNAMVLDVLN 456
             G+   M   V  
Sbjct: 361 YGGTNEIMKEIVAR 374


>gi|86134097|ref|ZP_01052679.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85820960|gb|EAQ42107.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 602

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/444 (16%), Positives = 157/444 (35%), Gaps = 45/444 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            +++++   G         +  +       +                        +M + 
Sbjct: 66  EVMKKAGELGFLGVAVPEEYGGMGMGFVSTMITCEYISSGNGSLSTAFGAHTGIGTMPIT 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E+                  LTE   G+D  +  +  +   D
Sbjct: 126 LYGTEEQKQKYVPKLASGEWMG-------------AYCLTEPGAGSDANSGKTTAELSED 172

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED---GSPNGLCYQRLKNK 278
           G          W  ++   +  I+ A++E       +   + +    +PNG+     ++K
Sbjct: 173 GKSYKINGQKMWISNAGFCNLMIVFARIEDDK---NITGFIVEYDAANPNGITLGEEEHK 229

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R+++T ++ F++T       L+V  G  +   +   +  +  A   +   R  L  A
Sbjct: 230 LGIRASSTRQVFFNDTVVPAENMLSVRGGGFKIAVNALNVGRIKLAAACIDSQRRVLTTA 289

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------AKSRSE 388
           + YA  R      + D   +K  +A++A +  A  + S+R A   ++       A +  +
Sbjct: 290 LQYANERKQFKTPIADFGAIKAKLAEMATNCYAGESASYRAAKDIEDRIEMRMAAGNSHQ 349

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   I K    +   A   E ++  GG G+ EE  +   +R++    I 
Sbjct: 350 EAELKGVEEYAIECSILKVTVSEDVQACADEGIQIFGGMGFSEETPMEAAWRDARIARIY 409

Query: 444 LGSGNAMVLDVLNLL-EKGTNLFEQLFS---TLEQDLGSSGKKVITILRDSISLCKEDKG 499
            G+     +  + +L +K       L      +  +L            +     +E + 
Sbjct: 410 EGTNEINRMLSVGMLIKKAMKGHVDLLGPATAVADELMGIPSFDTPDYSEL--FAEEKEM 467

Query: 500 LARFLTEKIALASSAAALYRAGMN 523
           +A+   +K+ L  + +A+ + G +
Sbjct: 468 IAKL--KKVFLMVAGSAIQKYGPD 489


>gi|71665289|ref|XP_819616.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70884925|gb|EAN97765.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 148/398 (37%), Gaps = 40/398 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +E+  +A+    +     P   + D+   +P  H L + +   GL      + + 
Sbjct: 31  LSEQQKEVRDLAHRFAKE--KIIPVAAKLDQTMEYP--HDLFKEAWELGLINMHIPQEYG 86

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    +                   +  S + V +       K +  ++       
Sbjct: 87  GFGASCLEGVIVHEELSWGCSGISTAFEANNLSQAPVIIAGNDAQKKKFLGRML------ 140

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+AAI +  +K  D         W  +  +++ + +
Sbjct: 141 -------EEPLKSAYCVTEPGAGSDVAAIKTFAKKKGDAYVVNGQKMWITNGGVANWYFL 193

Query: 246 LAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           LA  + G +G       + D +  G+   + +  +G R + T  + F +    ++ + NV
Sbjct: 194 LANSDEGFIG------FVVDANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANV 244

Query: 305 STGPVEDMKILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P +  KI +          AI +V+  + ++ EA  YA +R   G  + +   +   
Sbjct: 245 LGKPGDGFKIAMRAFDFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFM 304

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L++R A   D+ +S +         A   K +  +     +  A++ 
Sbjct: 305 LADMAAGIEAARLLAYRAAWEVDQGRSNT-------YYASSAKLFAAEHCERCVTAAVQI 357

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG+G+     + + YR++   SI  G+     L +  
Sbjct: 358 FGGNGFNTGYPVEKLYRDAKIFSIYEGTSQIQRLVISR 395


>gi|307294165|ref|ZP_07574009.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880316|gb|EFN11533.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 579

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 92/546 (16%), Positives = 180/546 (32%), Gaps = 64/546 (11%)

Query: 43  LVALIANFPSVVHKELELLGE---YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF 99
           L   +        + L  + +    V +       R  +   P+L A        D V  
Sbjct: 18  LFDWLDTGSGEERETLMAMIDATQRVAAEAFLPHYRQGDIEEPRLEA--------DGVHV 69

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            PA H  +      GL  + +      +       +     +  A +        +  +A
Sbjct: 70  LPAIHQAMALYAQMGLFGASFPEELGGLGLSCTASLAIHAGFAAANVSTAGYPMLTAANA 129

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++A   TP     +A       +  T             + L+E + G+ +  I ++  
Sbjct: 130 RLIAAFGTPAQVDRFARPQIEGRWFGT-------------MCLSEPQAGSSLGDIRTRAV 176

Query: 220 KIS----DGIYCLSGHKWFLSSPMSDA-----FIMLAQV----------EGRVGCFLVPR 260
                   G Y LSG+K ++S+   +       ++LA++             +  F+VP+
Sbjct: 177 ADGEDELGGRYRLSGNKMWISAGDQNVSENIVHLVLAKIAQQDGGLPEGSKGISLFIVPK 236

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIY 317
           +L DG+ N L    L +K+G R  A   L F       G+ +G        +  M     
Sbjct: 237 ILPDGTRNDLAVAGLNHKMGFRGTANCLLNFGEGAGAVGWRVGGEGQGLAQMFMMMNEAR 296

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAA 368
           +   + + +       +++ YA+ R               + + P ++R +         
Sbjct: 297 ISVGMGAAALAYRGYRQSLRYAQERLQGRAVGVRNGAPIPIFNHPDVRRMLLQQKAYAEG 356

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A AL    A   D+    +E      ++ P+ K W  +        A++  GG GY  + 
Sbjct: 357 ALALCLYCARLVDQGGEDAE--TLLALLTPVAKSWPSEFGLIANDLAIQVHGGYGYTRDF 414

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK----- 481
            + + +R++  N I  G+     +D+L   +L         L   +    G + +     
Sbjct: 415 DVEQLWRDNRLNPIHEGTTGIQAIDLLGRKILLSDGRPLALLRDRIGDTAGRAMETAEWA 474

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
                L D     ++     R L    A   +   L   G   +A ++L+       H+ 
Sbjct: 475 PAAAALLDYWRHVEDVVAGLRALGGAEAYDDATLFLRAFGHGVLAWLWLDQVLHARGHAD 534

Query: 542 HCMLHG 547
             M  G
Sbjct: 535 SAMESG 540


>gi|70606898|ref|YP_255768.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68567546|gb|AAY80475.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 400

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 136/363 (37%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L ++   GL+       +          + A              ++      + + 
Sbjct: 49  KEVLEKAKELGLYGVSVPEEYGGQGGDSLMTVIAQEEMARVWAALSTRVAVGGLFMTPIL 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +    K +               P+ K         TE + G+D+A + S  +K+ +
Sbjct: 109 LFGSEEQRKKYV-------------TPVAKGDKVAAFANTEPQAGSDVAGMQSTAKKV-N 154

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G Y L+  K F+++  ++D +++ A+    E       +   + +    G+        +
Sbjct: 155 GKYILNARKIFITNGGIADYYVVTARTSPPEPNARWKGISMFVVEREWKGVKVLNRIETM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI-- 336
           G +++ T EL F +         N+        K  +   D++ + V+G  + +A+A   
Sbjct: 215 GLKASNTAELAFEDVEVPA---ENLVGEEGMGFKYAMSTFDASRVGVAGQALGVAQAALE 271

Query: 337 ---HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
              +Y+ +R   G  L+   +++  IA+   ++ AA  +++  A  +++  +       A
Sbjct: 272 KMTNYSVQRSAFGSPLLGFQMVQEKIAETLTEVNAARLVTYWAATLYNKGMTNE-----A 326

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            I + + KY+  ++A      A+   GG G      + R  R+     I  G+ +   L 
Sbjct: 327 IIASSMAKYFATEVAERAAIRAITVHGGYGVATSTGVERLLRDVEIMKIYEGANDIQKLV 386

Query: 454 VLN 456
           +L 
Sbjct: 387 ILK 389


>gi|33603689|ref|NP_891249.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577814|emb|CAE35079.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 386

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 148/398 (37%), Gaps = 29/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +ELAR       +     P  + W+  +  PA H +++     GL        +  
Sbjct: 4   THEHRELARTTRRIIAE--HLDPYLDEWEAAQMFPA-HQVMKALGSAGLLGIGKPAEYGG 60

Query: 127 VVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++++  A     + +   +  +   S      +A   +  + + +          
Sbjct: 61  MELDFSYEMVFAETLGEVRSSGLSSAIGVQSTMCTPALARHGSDALKRAYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
               AP     +   +G++E   G+D++ I +  ++  D         W  +    D   
Sbjct: 112 ----APTIAGDLVGCIGVSEASAGSDVSQIKTWARRDGDDYVINGSKMWITNGVQGDWIC 167

Query: 245 MLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LG 300
           +L       G       ++      G+   R  +K+  R++ T EL F +    +   +G
Sbjct: 168 LLCNTSQEGGPHKNKSLIIVPLDTPGVSVSRKLDKLVLRASDTAELFFDDVRVPVSNRIG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             N+      +      +  A   +  M   + E I YA +R V GG ++   V+   +A
Sbjct: 228 AENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  +I A  +L +R    + + +  ++       +A + KY   +++  +  E ++  G
Sbjct: 288 QMQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G G + E  I+R YR+    +I  G+   M+  +   +
Sbjct: 341 GQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTM 378


>gi|302533113|ref|ZP_07285455.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442008|gb|EFL13824.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 409

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 130/395 (32%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++    D                  +E   
Sbjct: 85  IALSIVGTGLAAIGVVANGTEEQIGTWIPQMYGTPDD----------VKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+ A+ ++       D         W  +  +++  I++A V+  +G       +   
Sbjct: 135 GSDVGAMRTRAVYDQAKDEWVLNGTKTWATNGGIANVHIVVAVVDPELGTKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------------------- 304
           +  GL   +   K G R++ T E+   +        L                       
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLEDVRIPGSCLLGGKEKLDERLARARERAAAGGGE 254

Query: 305 -STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                              M+V   R +   A+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 255 RVKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMR 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +R +      +  +           ++K +  ++A  V A+A++ +GG+G
Sbjct: 315 TQIDAARLLVWRASWMAVAGRPFTSA------EGSMSKLFASEVAKKVTAQAVQILGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 369 FTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 403


>gi|322825515|gb|EFZ30450.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 401

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 148/398 (37%), Gaps = 40/398 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   +E+  +A+    +     P   + D+   +P  H L + +   GL      + + 
Sbjct: 31  LSEQQKEVRDLAHRFAKE--KIIPVAAKLDQTMEYP--HDLFKEAWELGLINMHIPQEYG 86

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    +                   +  S + V +       K +  ++       
Sbjct: 87  GFGASCLEGVIVHEELSWGCSGISTAFEANNLSQAPVIIAGNDAQKKKFLGRML------ 140

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+AAI +  +K  D         W  +  +++ + +
Sbjct: 141 -------EEPLKSAYCVTEPGAGSDVAAIKTFAKKKGDAYVVNGQKMWITNGGVANWYFL 193

Query: 246 LAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           LA  + G +G       + D +  G+   + +  +G R + T  + F +    ++ + NV
Sbjct: 194 LANSDEGFIG------FVVDANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANV 244

Query: 305 STGPVEDMKILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P +  KI +          AI +V+  + ++ EA  YA +R   G  + +   +   
Sbjct: 245 LGKPGDGFKIAMRAFDFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFM 304

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A  I AA  L++R A   D+ +S +         A   K +  +     +  A++ 
Sbjct: 305 LADMAAGIEAARLLAYRAAWEVDQGRSNT-------YYASSAKLFAAEHCERCVTAAVQI 357

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG+G+     + + YR++   SI  G+     L +  
Sbjct: 358 FGGNGFNTGYPVEKLYRDAKIFSIYEGTSQIQRLVISR 395


>gi|145589003|ref|YP_001155600.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047409|gb|ABP34036.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 392

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 137/395 (34%), Gaps = 39/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R       PA    +      GL        +        ++ +
Sbjct: 30  AEYAQGRLMPRIQEAYR--NETTDPAIFREMG---ELGLLGVTIPEQYGGSNLNYVSYGL 84

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    T    + + PK+ S E+            
Sbjct: 85  IAREIERVDSGYRSMMSVQSSLVMVPINDFGTEAQKQKYLPKLASGEW------------ 132

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D   + ++ +K+  G        W  ++P++D F++ A+ +     
Sbjct: 133 -IGCFGLTEPNYGSDAGGMITRAKKVPGGFSLTGSKMWISNAPIADVFVVWAKNDEG--- 188

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
            ++   + +    GL   ++  K+G R++ T E+     F     +    TG        
Sbjct: 189 -IIRGYILEKGMKGLSAPKISGKLGLRASITGEIVMDEVFVPDENEFPEVTGLK---GPF 244

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   +S   +  AE   +A R     R   G  L    ++++ +AD+  +IA   
Sbjct: 245 TCLNSARYGISWGALGAAEWCWHAARQYTLDRKQFGKPLAANQLIQKKLADMQTEIALGL 304

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  +  +   A +  GG+G  +E  +
Sbjct: 305 QGCLRLGRMKDEGIA-------APEITSIMKRNSCGKSLDIARMARDMHGGNGISDEYGV 357

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 358 ARHMMNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 391


>gi|311268306|ref|XP_003131991.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Sus scrofa]
          Length = 500

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 139/363 (38%), Gaps = 36/363 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALM 165
           ++     G            V        R   +  M  L     L +        + L 
Sbjct: 130 MQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGIVLGAHQSIGFKGILLF 189

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224
            T    + + PK+ S E             V     LTE   G+D A+I S       G 
Sbjct: 190 GTKAQKEKYLPKVASGE-------------VMAAFCLTEPSSGSDAASIRSSAVPSPCGK 236

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQRLKNK 278
            Y L+G K ++S+   +D F + A+    +   G     +   L +    G+ +   + K
Sbjct: 237 YYTLNGSKIWISNGGLADLFTVFAKTPVTDPATGAVKEKITAFLVERGFGGVTHGPPEKK 296

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G +++ T E+ F           NV        K+ ++ L++    ++          +
Sbjct: 297 MGIKASNTAEVYFDEVQVPT---ENVLGEVGGGFKVAMHILNNGRFGMAAAMAGTMKAII 353

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+++A  R   G  + +  V++  +A +A+      ++++ ++ + D+  +       
Sbjct: 354 AKAVNHAANRTQFGEKIHNFGVIQEKLARMAMLQYVTESMAYMVSANMDQGSTD------ 407

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L
Sbjct: 408 FQIEAAISKIFGSEAAWKVTDECIQVMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL 467

Query: 453 DVL 455
            V 
Sbjct: 468 FVA 470


>gi|308178599|ref|YP_003918005.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307746062|emb|CBT77034.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 378

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 134/377 (35%), Gaps = 27/377 (7%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              P   +WD+ +  P    +L  +   G+               ++  +        A 
Sbjct: 22  RIAPNALKWDQEQHFPV--DVLAEAGQLGMGGIYVSEDHGGSGLSRSDAVLVFEELAKAD 79

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +S       MV           W P + + E                   LTE 
Sbjct: 80  PTLAAYISIHNMVVWMVDTFGNDEQRAKWLPSMTAME-------------DLGSYCLTEP 126

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D AA++++ ++  D  Y LSG K F+S    S  +I++A+     G   +   L  
Sbjct: 127 GVGSDAAALSTRARRDGDE-YVLSGVKQFISGAGSSALYIVMART-ADTGSRGISAFLVP 184

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
           G   GL +   + K+G ++  T ++         G LLG+                L+  
Sbjct: 185 GDAEGLSFGPNEKKMGWKAQPTRQVIMEGVRIPAGNLLGEEGQGFSMAMQALNGGRLNIG 244

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+ G + +L ++  Y + R   GG L  Q  +   +A++ +++ AA +L  R A + D
Sbjct: 245 ACSLGGGQSALEKSALYLKERQAFGGPLTRQEALVFKLAEMDMELEAARSLLRRAAAALD 304

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                         +  + K             A++  GG GY+ +  + +  R+   + 
Sbjct: 305 AKSPDR------VRLCAMAKKMATDAGFNAANSAIQLHGGYGYLADYGMEKIARDLRVHQ 358

Query: 442 ILLGSGNAMVLDVLNLL 458
           IL G+   M L V   L
Sbjct: 359 ILEGTNEIMSLIVGRTL 375


>gi|297154353|gb|ADI04065.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 142/397 (35%), Gaps = 41/397 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               ELAR       +L    P   R+++    P   AL+R     GL    +   +   
Sbjct: 18  ALVDELARE------ELE---PRAARFEEDGQFPE--ALVRLLGKQGLMSLPFPERWGGG 66

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            +     ++       + L     +   V +   +A   T  +  +  P++ S E     
Sbjct: 67  GQSYTVYLKVIERLAGSWLAVAESVHLQVLACHGLARFGTDELRSELLPRMLSGE----- 121

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                   +     ++E   G+D+ A++++               W   + ++D + +  
Sbjct: 122 --------LLAANCMSEPEAGSDLGAMSTKAVAEDGHHVISGTKAWVSHAGVADVYNVYC 173

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +  G      +   L D    GL     + K+G RS  T ++ F          +     
Sbjct: 174 RTGGSA-LSGLSCFLVDADSEGLRPLAHERKMGVRSLPTAQIAFDGVRVPDQRMIGRRNR 232

Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIAD 361
               M +  +  D   + +S   V LA+A         + R   G  +I    +   +AD
Sbjct: 233 ---GMLVAAHVFDHGRLGISACAVGLAQAALDHAAAYAKERTQFGKPIISFQGLSFLLAD 289

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  IAAA AL + +A   D+ K  S EAA         K +    A  V  +A++ +GG
Sbjct: 290 MATQIAAARALLYSVAALKDQGKPISAEAAK-------CKLFATDTAMRVTTDAVQVLGG 342

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY ++  + R  RE+    IL G+     + +   L
Sbjct: 343 YGYTQDFPVERWMREAKLLQILEGTNQIQRIAIAQSL 379


>gi|296391821|ref|ZP_06881296.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 386

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S ++V    +      WA  +F           + 
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALVERELS---KVSWALHVFVARPSKILMACTG 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  +I ++  +  D         +   +  +D
Sbjct: 104 EQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V   L D    G+  +R    + NR   T E+ F +    
Sbjct: 164 FAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAADRKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  ++   A   D+      EA  A       K +  +    V  E
Sbjct: 284 VSFKLADMATQIRAAELMTLHTAWKMDQGTMTDGEAGMA-------KLFASETLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       V   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLR 382


>gi|294629478|ref|ZP_06708038.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832811|gb|EFF91160.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 133/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F       +HK  A      A+       S      +   
Sbjct: 40  RDFYYKLGELGIFGINVPEEFGGAGMD-SHKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  + E                 + +TE   G+D+A + +  +  
Sbjct: 99  IKMLATEEQKKRYLPKFVTGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTSAPTAEDRRFGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPAEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA  
Sbjct: 266 FAKQYVQERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRATEALDAGELTPAEAA-- 323

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 324 -----SAKLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKTI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|119475766|ref|ZP_01616119.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451969|gb|EAW33202.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 395

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 142/408 (34%), Gaps = 44/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A++ A+  N   P++                P+    +      GL  S    
Sbjct: 25  ERLIRDSARQYAQ--NKLQPRVTEAYRN------ESTDPSIFREMG---ELGLLGSTISG 73

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P V   ++ + A  +  +       +   S      +         + + PK+ S E
Sbjct: 74  YGCPGVNYVSYGLIAREVERVDSGYRSMMSVQSSLVMYPIYTYGNEAQREKYLPKLASGE 133

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                 GLTE   G+D   + ++  K+  G        W  +SP++D 
Sbjct: 134 W-------------IGCFGLTEPDHGSDPGGMITRATKVDGGYKMNGAKMWISNSPIADI 180

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           F++ A+ +  V    +   + +    GL   +++ K+  R++ T E+   + F     + 
Sbjct: 181 FVVWAKTDDDV----IRGFVLEKGFKGLTAPKIEGKLSLRASVTGEIVMQDVFVP---EE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKR 357
           N+          +  L SA   +S   +  AE   +A R     R   G  L    ++++
Sbjct: 234 NLLPNVQGLKGPMGCLSSARYGISWGVLGAAETCWHAARQYVLDRKQFGRPLAANQLIQK 293

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+  +I        +     D  +        A  +  + K   C  A  +   A +
Sbjct: 294 KLADMQTEITLGLQGCLQAGRLKDNDQ-------LAPELISMLKRNSCGKALDIARVARD 346

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             GG+G  +E  + RH       +   G+ +   L +L   + G   F
Sbjct: 347 MHGGNGISDEFPVFRHMCNLETVNTYEGTHDVHAL-ILGRAQTGIASF 393


>gi|15600172|ref|NP_253666.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|9951262|gb|AAG08364.1|AE004910_11 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
          Length = 386

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S ++V    +      WA  +F           + 
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALVERELS---KVSWALHVFVARPSKILMACTG 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  +I ++  +  D         +   +  +D
Sbjct: 104 EQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V   L D    G+  +R    + NR   T E+ F +    
Sbjct: 164 FAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAADRKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  ++   A   D+      EA  A       K +  +    V  E
Sbjct: 284 VSFKLADMATQIRAAELMTLHTAWKMDQGTMTDGEAGMA-------KLFASETLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       V   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLR 382


>gi|111019745|ref|YP_702717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819275|gb|ABG94559.1| probable long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii
           RHA1]
          Length = 381

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 138/362 (38%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             + R +   G+       ++    +   ++  A     +A +    + S S+       
Sbjct: 40  REVWREAGKQGILGLEVPETYGG-GQANDYRFNAVATEELAAVSMALVSSFSIHFDIVTP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  + T    ++W P++   E             V   +G+TE  GG+D+A++ +   +
Sbjct: 99  YIVDLATEETKREWLPQMAEGE-------------VVAAIGMTEPAGGSDLASLKTSAVR 145

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                + L+G K F+++   +D  ++ A+ + +     +   L D S  G    R  +K+
Sbjct: 146 DGSD-WILNGSKTFITNGYSADLVVVAARTDPQQRSRGISLFLVDSSLPGFERGRKLDKV 204

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   + T EL F          L         + +      L +A+ +V+  +  L+E I
Sbjct: 205 GQPESDTAELFFDGLRLPAAAMLGEPETGFAAMMERLPQERLGTAVANVAHAKQILSETI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  +      K  +A++   I  A A         D A +   E+  + + 
Sbjct: 265 DYVRNRKAFGRSIGSFQHNKFLLAELVTKIEVAQAFV-------DAAVTEHAESGLSPVD 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K+W   +   V+   ++  GG GY+ E  +AR + ++    I  GS   M   +  
Sbjct: 318 AAKAKWWSAHVQNEVLDHCVQLYGGYGYMREYRVARAWMDARVTKIWAGSNEIMKEIIGR 377

Query: 457 LL 458
            L
Sbjct: 378 DL 379


>gi|321460362|gb|EFX71405.1| hypothetical protein DAPPUDRAFT_327246 [Daphnia pulex]
          Length = 632

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/480 (17%), Positives = 173/480 (36%), Gaps = 64/480 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHC-SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +     A    LR     GL   + +D       +            L   +    L + 
Sbjct: 106 EASVPEATTQGLRELGAFGLQAPTEYDGVGLNNTQYARLVEIVGGFDLAVGI---FLGAH 162

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                  + L       K + P++ + E                   LTE   G+D  +I
Sbjct: 163 QSIGFKGITLFGNEEQKKKYLPRVATGE-------------AFAAFCLTEPSSGSDANSI 209

Query: 215 TSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGS 266
            S+     DG  + L+G K ++S+   ++   + AQ        G      V   + + S
Sbjct: 210 RSRAVLSPDGKHFILNGSKIWISNGGFAEIMTVFAQTPVTDPVTGETKDK-VTAFIVERS 268

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G+     + K+G + + T E+ + N    +    NV  G  +  K+ +  L++    +
Sbjct: 269 FGGVTSGPPEKKMGIKCSNTAEVYYDNVPIPV---ENVLGGVGQGFKVAMNILNNGRFGM 325

Query: 326 SG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +      M+ S   AI +A  R   G  +     ++  +A +A+      ++++ ++++ 
Sbjct: 326 AAALSGTMKSSTKAAIQHATARVQFGRRIDSYGTIQEKLARMAMLHYVTESMAYMISSNM 385

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +        ++ A I+K +  + A  V  EA++ +GG+G++    + +  R+    
Sbjct: 386 DKGSTD------FQLEAAISKVFASEAAWTVTDEAIQILGGNGFMTANGLEKVLRDLRIF 439

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDK 498
            I  G+ + + L V L  L+       QL   L+  ++G    +     + ++   + + 
Sbjct: 440 RIFEGTNDILRLFVALTGLQFAGGHLRQLQKALKSGNVGVILGEAAKRAKRTVGFSQTN- 498

Query: 499 GLARFLTE---KIALASS-------------AAALYRAGMNDIADVFLENRFLDNCHSTH 542
                L E   K+AL                 + L + G   + + FL NR        +
Sbjct: 499 ----SLAEVHPKLALQGQLTSKAVEGFGITVESLLVKYGKGILDEQFLLNRVASAAIDIY 554


>gi|167563902|ref|ZP_02356818.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
           EO147]
 gi|167571037|ref|ZP_02363911.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis
           C6786]
          Length = 395

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/411 (18%), Positives = 143/411 (34%), Gaps = 36/411 (8%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LG+ +             Y   +L        R +  +      A+ R     GL     
Sbjct: 14  LGQQLTDDERMVRDAANAYAQDKLAPRVTQAFRHETTDT-----AIFREMGELGLLGPTI 68

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIF 179
              +             AR           +MS  S      +    +    + + PK+ 
Sbjct: 69  PEQYGGPGLGYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 128

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           + E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP+
Sbjct: 129 TGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGSKMWITNSPI 175

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D F++ A+++   G   +   + +    GL    +  K+G R++ T E+   + F    
Sbjct: 176 ADVFVVWAKLD-EDGRDEIRGFILEKGWKGLSAPTIHGKVGLRASITGEIVLDDAFVP-- 232

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPV 354
            + N+  G          L+SA   ++   +  AE+  +  R     R   G  L    +
Sbjct: 233 -EENIMPGVKGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQL 291

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +++ +AD+  +I        RL    DE  +       A  +  I K   C  A  +   
Sbjct: 292 IQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARL 344

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 345 ARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|121610468|ref|YP_998275.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121555108|gb|ABM59257.1| Butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
          Length = 386

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 134/379 (35%), Gaps = 25/379 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P   +WD+    P   A + ++   G        +   +   +               
Sbjct: 24  FAPHAAQWDEQAIFP--RAAIAKAGALGFCGLYACEAAGGLALPRLDATLVFEELAAIDP 81

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +S    +  M+    TP V   W P +   E                   LTE  
Sbjct: 82  STTAFISIHNMATWMLGRWATPAVRDHWGPLLTRGE-------------KLASYCLTEPG 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D AA+T++ +++    Y ++G K F+S   S   ++L    G  G   +        
Sbjct: 129 AGSDAAALTTRAERVGSD-YVINGSKAFISGAGSTDMLVLMARTGAAGAGGISAFAVPAD 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+ Y + + K+G  S  T  +           LLG +               ++ A  
Sbjct: 188 TPGISYGKKERKLGWNSQPTRSIGLEQLRIPAEHLLGRVGEGFKIAMQGLDGGRINIASC 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           SV   + +L  A  Y ++R   G  L     ++  +AD+A ++ AA  +    A+  D  
Sbjct: 248 SVGAAQGALQAARQYMQQRRQFGQPLASFQALQFKLADMATELVAARQMVRLAASKLDTG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                    A     + K +   +  AV  EA++  GG GYI E  I R  R++  + IL
Sbjct: 308 APD------ASTYCAMAKRFATDIGFAVCNEALQLHGGYGYIREYPIERLLRDTRVHQIL 361

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            GS   M L +   +  G 
Sbjct: 362 EGSNEIMRLIIARRILDGA 380


>gi|293608788|ref|ZP_06691091.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829361|gb|EFF87723.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 379

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   S   +  +  + +      W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQSELVSPYLQNIGSEEQKHYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRVNGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIEITKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|330961142|gb|EGH61402.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 600

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 94/505 (18%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA    +   I  G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPA----VDAFIAAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTSYPFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +  +DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPATDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G+ N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNEDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +          ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLTYMFQMMNEARIGVGLGATMLGYSGYLYSLEYARDRPQ-GRLPDSKSPD 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++      R +      ++ 
Sbjct: 336 SKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTETGETDDVRKQAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      +     +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLIASTCERAQAHASLHELRQPLEQLVTRLQAVTLGLLSDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 SSTLANSALYLKAFGHTVIGWRWLE 540


>gi|311264384|ref|XP_003130140.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like,
           partial [Sus scrofa]
          Length = 251

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 110/258 (42%), Gaps = 12/258 (4%)

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D A++ +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  ++ + 
Sbjct: 1   SGSDAASLLTSAERQGDH-YILNGSKAFISGGGEADIYVVMCRT-GGPGHKGISCVVVEK 58

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
              GL + + + K+G  S  T  + F +    +   +GD                ++ A 
Sbjct: 59  GTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGDEGQGFLIALRGLNGGRINVAS 118

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+     S+     + + R   G  L +   ++  +AD+A  + A+  +    A +   
Sbjct: 119 CSLGAAHASIILTRDHLKVRKQFGEPLANNQYLQFKLADMATKLVASRLMIRSAAVAL-- 176

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                EE   A  +  + K +       +  +A++  GG GY+++ ++ ++ R+S  + I
Sbjct: 177 ----QEEREDAVALCSMAKLFATDECFEICNQALQMHGGYGYLKDYAVQQYVRDSRVHQI 232

Query: 443 LLGSGNAMVLDVLNLLEK 460
           L GS   M + +   L +
Sbjct: 233 LEGSNEVMRMLISKSLLQ 250


>gi|113868775|ref|YP_727264.1| glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527551|emb|CAJ93896.1| Glutaryl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 397

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 130/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 54  EIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 114 EFGTEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++G  G   +   + +    GL    +  K+G R+
Sbjct: 161 GYELTGAKMWITNSPIADVFVVWAKLQGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE   +  R  
Sbjct: 221 SITGEIVLDQVFVP---EENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 TLDRKQFGRPLAATQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGLQAF 396


>gi|260554057|ref|ZP_05826320.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|260404796|gb|EEW98303.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp.
           RUH2624]
          Length = 385

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 143/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P   +W+     P  H + ++    GL          
Sbjct: 4   TDEHEALRRTARQFVQNELNPHIP---KWETEGRFP-IHDVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G+     V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGYAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I A  AL+++        +  ++       +A + K    ++   V    ++  GG
Sbjct: 288 LMTEIEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLTREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|110635619|ref|YP_675827.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110286603|gb|ABG64662.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 388

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 129/378 (34%), Gaps = 24/378 (6%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D++  +P    +        L    +  ++  +    +    AA           
Sbjct: 27  RANEIDRLGEYP--QDMFDMLKELELFRLPFPEAYGGMGSVLS-AAVAAEELCRVCYNTA 83

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++M         +    T      + P + S               +   + +TE + G+
Sbjct: 84  YVMIAQWGPFGAIHHGGTDEQRLRFLPGLCSG-------------DLRASIAVTEPQNGS 130

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+A I S+ + +S G        W  ++ ++D  ++ A++        V   +     +G
Sbjct: 131 DVAGIKSRARAVSGGYLLNGAKIWCTNAAVADFIVVGAKLGDDDSRHAVNLFIVQKGTSG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL----NVSTGPVEDMKILIYLDSAIMSV 325
           L     ++K+G R   +  L F + F      L          V              +V
Sbjct: 191 LTIGPKEDKLGARGLPSCPLFFEDVFVPEENRLGGNDGGGFKAVMAGFNEFRPIIGARAV 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++  AI +   R+  G  + D   ++  +AD+A+   AA  L +  A   D  + 
Sbjct: 251 GLAQGAIDHAIQFVTNRYTFGARVSDNQGIRWMLADMAMQTEAARILVYSAAAMVDSGER 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             + A      A + K +   +A  V  +A++  G +G   +  I R+ R++    I+ G
Sbjct: 311 GEKLA----QQAAMAKAFATDVAMKVTTDAVQLFGAAGISNDSPINRYMRDAKVTQIVEG 366

Query: 446 SGNAMVLDVLNLLEKGTN 463
           +       + N++     
Sbjct: 367 TNQIQRTIISNVMLGRPE 384


>gi|120402973|ref|YP_952802.1| butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119955791|gb|ABM12796.1| Butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 397

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 127/378 (33%), Gaps = 34/378 (8%)

Query: 95  DKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   +  ++ + GL   +    +  +                  +    +++
Sbjct: 34  QELEHSDTYPQAIVDAMKEMGLFGLMIPEEYGGLGESLLTYALCVEELARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+    T      +  ++ + E                   ++E   G+D+AA
Sbjct: 94  THFIVAYMIRQHGTDAQKSRYLTRMATGE-------------TRGAFSMSEPELGSDVAA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVE--GRVGCFLVPRLLEDGSP--- 267
           I ++ +   DG Y + G K +L++  S   +  L + +         +   L +      
Sbjct: 141 IRTRARDNGDGTYTIDGQKMWLTNGGSSTLVAALVRTDEGADKPHRNLTAFLIEKPTGFG 200

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               GL      +K+G +   T EL F          L          + D   +  ++ 
Sbjct: 201 EVAPGLTIPGKLDKLGYKGIDTTELIFDGYRAGATDILGEAPGQGFFQMMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +  +      +   A+ YA++R   G  + +   +   +A++A  + AA  +    A   
Sbjct: 261 SARACGVGIRAFELAVRYAQQRSTFGKPIAEHQAIAFQLAEMATKVEAAHLMMVNAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +     A  A       KY+  ++   V  ++    GG GY +E  I R  R++P  
Sbjct: 321 DSGERNDVAAGMA-------KYFASEVCAEVTQQSFRIHGGYGYSKEYEIERLMRDAPFL 373

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+       +   L
Sbjct: 374 LIGEGTSEIQKNIISKRL 391


>gi|297562204|ref|YP_003681178.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846652|gb|ADH68672.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 385

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/363 (19%), Positives = 134/363 (36%), Gaps = 29/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
           + ++ +    GL    +      +         A           A  L +     A  +
Sbjct: 40  YEIVAKMGRMGLFGLPFPEEHGGMGGDYFALCLALEELARVDSSVAITLEAGVSLGAMPI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + P++ S E                  GLTE  GG+D  A  +   ++ 
Sbjct: 100 FRFGTEDQKKAYLPRLTSGE-------------ALGAFGLTEPGGGSDAGATRTTA-RLE 145

Query: 223 DGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG + + G K F+++  +D  A + +  V GR   G   +  +L      G    +  +K
Sbjct: 146 DGQWVVDGTKSFITNSGTDITALVTVTAVTGRREDGRPEISSILVPAGTPGFSVGQKYSK 205

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G  ++ T EL F +        +     G  + ++IL    +  A +SV   +  + E+
Sbjct: 206 VGWNASDTNELVFEDCRVPEANLVGERGRGYAQFLRILDEGRIAIAALSVGLAQGCVDES 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  RH  G  +     ++  IA++      A    +  A+     +   +EAA A++
Sbjct: 266 VRYAHERHAFGSAIGTYQAIQFKIAEMEARAHTARLAYYDAASRMLAGEPFKKEAAVAKL 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A          A     +A +  GG G++ +  + R YR++    +  G+     + + 
Sbjct: 326 VASNA-------AMDNARDATQVFGGYGFMNDYPVGRFYRDAKILEVGEGTSEVQKMLIA 378

Query: 456 NLL 458
             L
Sbjct: 379 REL 381


>gi|298207817|ref|YP_003715996.1| acetyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83850455|gb|EAP88323.1| acetyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 602

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/440 (16%), Positives = 152/440 (34%), Gaps = 41/440 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            ++R++   GL        ++ +       +        A    A    + +      + 
Sbjct: 68  EIMRKAGELGLLGVAVPEEYDGLGMGFVTTMLVCDYISGATGSIATAFGAHTGIGTMPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K + PK+ + E+                  LTE   G+D  +  ++     D
Sbjct: 128 LYGNEEQKKKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 174

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G          W  ++   + F++ A++E      +   ++E+   NG+     + K+G 
Sbjct: 175 GTHYKITGQKMWISNAGFCNLFVVFARIEDDK--NITGFIVENNPENGISMGEEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ F++T   +   L     G    M  L    +  A   +   R  +  A+ Y
Sbjct: 233 HSSSTRQVFFNDTEVPVENMLSERGNGFKIAMNALNVGRIKLAAACLDAQRRVIDSAVKY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--------SFDEAKSRSEEA 390
           A  R      +     +++ +A++A       + S+R A            +  S SE  
Sbjct: 293 ANDRIQFKTPISQFGAIQQKLAEMATAAYVGESASYRAAKNIEDRIAIRMADGASHSEAE 352

Query: 391 ----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   I   I K    +       E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 353 LKGVEEYAIECSILKVAVSEDIQNCSDEGIQIYGGMGFSADTPMESAWRDARISRIYEGT 412

Query: 447 GNAMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
                +  + +L     KG        + + Q+L            + +S  +E   +AR
Sbjct: 413 NEINRMLAVGMLVKKAMKGQVDLLGPATAVGQELTGIPSFDTPDFSEVLS--EEKDMIAR 470

Query: 503 FLTEKIALASSAAALYRAGM 522
              +K+ L  + +A+ + G 
Sbjct: 471 L--KKVFLMVAGSAVQKYGP 488


>gi|116694310|ref|YP_728521.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528809|emb|CAJ95156.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 389

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 132/368 (35%), Gaps = 35/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      G    +    +  +          A       +  G L++    +  + A
Sbjct: 39  RELIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGWMSVGSLIARG--NGLIGA 96

Query: 164 LMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           L   TP    ++ P++ + ++                  L+E   G+D+A I+ +  +  
Sbjct: 97  LKALTPEKKAEYLPRMAAGQF-------------LGAFSLSEPNAGSDVANISCRAVRNG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGS----PNGLCYQR 274
           D         W   +  +D  +++ + +     +     +   + +      P G+    
Sbjct: 144 DEWVITGNKYWCTFADEADFILVICRTDAVIDPKARHKGLSAFMVEKPRGALPEGVK-GS 202

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  KIG     T EL F         ++GD   +              +A  S+   + +
Sbjct: 203 VIPKIGYHGWTTWELAFDGCRVPHSKMVGDEGKAFYLATAGLEAARAHTAARSIGLAQGA 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L ++I YAR R   G  + +   ++  IAD+A  I AA AL + +    D+         
Sbjct: 263 LEDSIQYARDRAQFGSPIGNFQAIRFKIADMATQIEAARALLYSVCEKIDDG-------G 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A   A + K +  +M   V +E ++  GG+GY    +  R++R++    I  G+    +
Sbjct: 316 RADTEASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQM 375

Query: 452 LDVLNLLE 459
             + + L 
Sbjct: 376 RIISDALM 383


>gi|73955396|ref|XP_857243.1| PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain
           specific, mitochondrial precursor (VLCAD) isoform 7
           [Canis familiaris]
          Length = 522

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/307 (19%), Positives = 129/307 (42%), Gaps = 35/307 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I S     
Sbjct: 184 ILLFGTKAQKEKYLPKLASGE-------------SIAAFCLTEPSSGSDAASIRSSAVPS 230

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 231 PCGKYYTLNGSKIWISNGGLADVFTVFAKTPVTDAATGAVKEKITAFVVERSFGGVTHGP 290

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F +         NV        K+ ++ L++    ++       
Sbjct: 291 PEKKMGIKASNTAEVYFDSVRVPA---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 347

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 348 RGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 405

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 406 ----FQIEAAISKIFGSEAAWKVTDECIQILGGMGFMKEPGVERVLRDLRIFRIFEGTND 461

Query: 449 AMVLDVL 455
            + L V 
Sbjct: 462 ILRLFVA 468


>gi|301346414|ref|ZP_07227155.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511559|ref|ZP_07236796.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB058]
 gi|301595606|ref|ZP_07240614.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB059]
          Length = 371

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 136/368 (36%), Gaps = 29/368 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + +    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGSEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAM 450
             G+   M
Sbjct: 361 YGGTNEIM 368


>gi|262204027|ref|YP_003275235.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087374|gb|ACY23342.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 390

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 125/362 (34%), Gaps = 26/362 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 45  DLRAQAAEIGLFGYAIPQQWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W  +I S               V     LTE   G++ A + ++  +  D
Sbjct: 105 NFGTDEQKVQWLERIASG-------------DVVASFALTEPGAGSNPAGLRTKAVRDGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+          +   L      GL       K+G  
Sbjct: 152 DWVINGDKRFITNAPVADLFVVFARTRPADESGTGIAVFLVPADTPGLEVGAKDRKMGQE 211

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F++        + GD +              +  A ++V   + +L E++ Y
Sbjct: 212 GAWTADVSFNDVRVPASALVGGDEDAGYRAAMTSLARGRIHIAALAVGTAQRALDESVAY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  IAD    + A  AL    A  +   + R       RI   
Sbjct: 272 AATATQGGTPIGNFQLVQAMIADQQTGVMAGRALVRDAARKYVNGEDR-------RIAPS 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +M   V   A++  GG+GY+   ++ R YR+     +  G+     L +   L
Sbjct: 325 AAKLFCTEMVGNVADLAVQIHGGTGYMHGVAVERIYRDVRLLRLYEGTSEIQRLIIGGGL 384

Query: 459 EK 460
            +
Sbjct: 385 IR 386


>gi|70733629|ref|YP_257269.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68347928|gb|AAY95534.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 393

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A++ A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDSAEQFAQD-KLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARKVDGGYSLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|326775304|ref|ZP_08234569.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655637|gb|EGE40483.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 380

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 133/390 (34%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +       D +    AW A    +   GL      + +         
Sbjct: 19  AFLAKEVLPHYEQW-----EQDGIVSRDAWLA----AGRAGLLGLAVPQEYGGGGSDDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +    A  +  A      +   +      +  + T    + W P   S E          
Sbjct: 70  YSAVLAEEFTRAGAPGLAIGLHNDIIGPYLTGLATDEQKRRWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG 251
                  + +TE   G+D+  I +  +   D  + L+G K F+S+  ++D  +++A+   
Sbjct: 120 ---TVTAIAMTEPGAGSDLQGIRTTAEDKGDH-WLLNGSKTFISNGIIADLVVVVAKTTA 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
             G   +  ++ +    G    R  +KIG ++  T EL F++        L       + 
Sbjct: 176 EGGAKGLSLIVVERGAEGFERGRNLDKIGQKAQDTAELFFNDVRVPKENLLGTRDGAFLH 235

Query: 311 DMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M  L    +  A+  ++     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 236 LMTNLAQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A         D       +     + A + K+W  ++   V    ++  GG GY+ E 
Sbjct: 296 TRAF-------LDRCIVDHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + +    +I  G+   M   +   L
Sbjct: 349 RVAKAFTDGRVQTIYGGTTEIMKEIIGRSL 378


>gi|293611433|ref|ZP_06693728.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826217|gb|EFF84587.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 385

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 129/360 (35%), Gaps = 23/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H + ++    GL           +    ++ +  A        E G+     V  A  V 
Sbjct: 38  HEVFKKMGDLGLLGICKPEENGGLALDYSYNLVVAE-------EIGYAACGGVPLAIGVQ 90

Query: 164 L-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             M TP + +       S+E       P         + ++E   G+D+AAI +  +K  
Sbjct: 91  TDMATPALARFG-----SKELRDEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDG 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  +S  +D F +LA             ++      G+ +    NK+G R
Sbjct: 146 DDYVINGSKMWITNSLQADFFCLLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMR 205

Query: 283 SNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S  T ++   N        + V                L +   ++ G++  + + I+Y 
Sbjct: 206 STTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQEERLWACANAIGGLQHCIQQTINYT 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R      LI+   +    A++  ++ A  AL+++        +          ++A +
Sbjct: 266 KERTTFDQPLINNQYIHFRFAELMTEVEALKALTYQACEQHIAGED-------VTMLASM 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    ++   V    ++  GG+G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 319 AKLKAGRLTREVADSCVQYWGGNGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|107104078|ref|ZP_01367996.1| hypothetical protein PaerPA_01005151 [Pseudomonas aeruginosa PACS2]
 gi|116053126|ref|YP_793447.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894076|ref|YP_002442945.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|313109988|ref|ZP_07795913.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|115588347|gb|ABJ14362.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218774304|emb|CAW30121.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310882415|gb|EFQ41009.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 386

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S ++V    +      WA  +F           + 
Sbjct: 47  GKALAAGFYAFNMPEEVGGGGLDYLSQALVERELS---KVSWALHVFVARPSKILMACTG 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  +I ++  +  D         +   +  +D
Sbjct: 104 EQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V   L D    G+  +R    + NR   T E+ F +    
Sbjct: 164 FAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAADRKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  ++   A   D+      EA  A       K +  +    V  E
Sbjct: 284 VSFKLADMATQIRAAELMTLHTAWKMDQGTMTDGEAGMA-------KLFASETLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       V   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLR 382


>gi|302521675|ref|ZP_07274017.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|318057649|ref|ZP_07976372.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. SA3_actG]
 gi|333024683|ref|ZP_08452747.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|302430570|gb|EFL02386.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|332744535|gb|EGJ74976.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 385

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/387 (20%), Positives = 146/387 (37%), Gaps = 40/387 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G+         A      +    G+        +     +++ K +A    
Sbjct: 27  PRHEEWVAAGQ---------APRDFYYKLGELGIFGIEVPEEYGG-AGEESFKFQAILSE 76

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A+       S    +  +  L    T    K W P   S                   
Sbjct: 77  ETARAGVSLGGSGVHVALCLPYLKAYATEEQKKRWLPDFVSG-------------RAMFA 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRV---G 254
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGTHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
            F +  L+ D    G    R  +K+G +++ T EL F++       LLG+ N     +  
Sbjct: 184 RFGISLLVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVKVPVADLLGEENKGFAYLGQ 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+ + +    ++  A  Y + R V G  +      K  +A    ++ AA A
Sbjct: 244 NLPQERLGIAVGAYAQAAAAVRFAQQYVQDRTVFGKPVAAFQNTKFELAACKAEVDAAEA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  R   + D+ +  + EAA A       K +C ++A  VI   ++  GG GY+ E  IA
Sbjct: 304 VCDRALEAHDKGELTAAEAASA-------KLFCTEVASRVIDRCLQLHGGYGYMNEYPIA 356

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R Y ++  N I  G+   M + +   +
Sbjct: 357 RLYADNRVNRIYGGTSEVMKMIIAKSM 383


>gi|157374123|ref|YP_001472723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316497|gb|ABV35595.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 391

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 130/369 (35%), Gaps = 37/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +    V   ++ + A  +  +       +   S      +
Sbjct: 52  RDIMNELGEMGLLGATLPEKYGCSNVSYVSYGLIAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + PK+ S E+                 GLTE   G+D   + ++ ++I 
Sbjct: 112 HAYGTEEQRGKYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTRAERIE 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D FI+ A++EG++  F++     +    GL   +++ K   R
Sbjct: 159 GGYRINGAKIWITNSPIADIFIVWAKLEGKIRGFIL-----EKGMPGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ T E+   N               VE +K     L+ A   ++   +  AE   +A R
Sbjct: 214 ASVTGEIVMDNVEVPETA----LMPNVEGLKGPFGCLNKARYGIAWGALGAAEFCWHAAR 269

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    ++++ + D+  +I+       +     D         A A   
Sbjct: 270 QYTLDRIQFNRPLASNQLIQKKLVDMQTEISLGLFACLQAGRLMDN-------DALAVEA 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   + +  GG+G  +E  I RH     A +   G+ +   L +L 
Sbjct: 323 ISMIKRNSCGKALDIARMSRDMHGGNGISDEFHIIRHVMNLEAVNTYEGTHDIHAL-ILG 381

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 382 RAQTGIQAF 390


>gi|311108128|ref|YP_003980981.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762817|gb|ADP18266.1| acyl-CoA dehydrogenase, N-terminal domain protein 18 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 146/405 (36%), Gaps = 45/405 (11%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE AR        P  +   P   +  +         L+      G    +    + 
Sbjct: 9   RMIQEAARQFTMERVLPVANRLDPEKGKIPR--------ELIDEMAELGFFGILIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYD 184
            +          A       +  G L++    +  + AL   TP+   ++ P++   E+ 
Sbjct: 61  GLGLGAYEYCLVAEQLSRGWMSVGSLIARG--NGLIGALKGLTPQKKAEYLPRMARGEF- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                            L+E   G+D+A I+ +  +  D         W   +  +D  +
Sbjct: 118 ------------LGAFSLSEPNAGSDVANISCRAVRDGDDWLITGSKYWCTFADDADFIL 165

Query: 245 MLAQ----VEGRVGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           ++ +    V+ +     +   + +      P G+    +  KIG     T EL F N   
Sbjct: 166 VICRSDPVVDPQARHKGLSAFMIEKPRGELPEGVQ-GSVIPKIGYHGWTTWELAFDNCRV 224

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               ++GD   +              +A  S+   + SL ++I YA++R   G  + D  
Sbjct: 225 PHSAMVGDEGKAFYLACAGLETARAHTAARSIGLAQGSLEDSIQYAKQRAQFGRPIADFQ 284

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+A  I A+ AL + +    D       EA+  +++A        +M+  V +
Sbjct: 285 AIRFKIADMATQIEASRALLYAVCEKIDRGVRTDTEASMVKLLA-------SEMSERVTS 337

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E ++  GG+GY    +  R++R++    I  G+    +  + + L
Sbjct: 338 EGLQVHGGAGYTTHCAAERYWRDARLTKIFEGTSEIQMRIISDAL 382


>gi|307294245|ref|ZP_07574089.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880396|gb|EFN11613.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 377

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 138/359 (38%), Gaps = 28/359 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           L  +    GL        F             A + + A   A   +     S  + AL 
Sbjct: 39  LFSQLAELGLMGMTAPEEFGGAGLDYV-SYALALMEIAAGDGALSTILSIQNSLIVSALL 97

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + P + +                     LTE   G+D +AI +   + ++
Sbjct: 98  RFGDRGQQRRFLPDLIAG-------------KAIGAFALTEADAGSDASAIRTSA-RQAE 143

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K F++S  ++   I+ A  +   G   +   L      G    +++ K+G  
Sbjct: 144 GGYVLNGSKQFITSGRIAKLAIVFAVTDVAAGKRGISAFLVPTDTQGFFVDKVEQKLGQG 203

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  + F   F      L V   G    +  L    +  A   V   + +++ A+ YA
Sbjct: 204 ASDTCAIRFDEMFVADDLILGVPGNGYAIALSNLEAGRIGIAAQCVGMAQAAMSIAVGYA 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +I+   +   +AD+A  + A+  L    A   D      +EA+ A+++A  
Sbjct: 264 QERRSFGRPIIEHQAVGFRLADLAAKLEASRQLVLHAAAVKDSGGDCLKEASMAKLVA-- 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 + A +V++ A++ +GG GY+EE  +A+ YR+     I  G+ +   + +   L
Sbjct: 322 -----SETAESVVSGALQTLGGYGYLEEFGVAKIYRDVRVCQIYEGTSDIQRMVIARSL 375


>gi|148264398|ref|YP_001231104.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146397898|gb|ABQ26531.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens
           Rf4]
          Length = 381

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 115/365 (31%), Gaps = 40/365 (10%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVV----------RKQAHKIRAARLYLMAQLEAGHLMSPSV 156
             +    G+        +  +               +  R + L            SP  
Sbjct: 42  WEKCAEFGIQRLPIPEEYGGLGVDILTCVATMEGLGYGCRDSGLLFAINSHIWTCESP-- 99

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    T    K + P +                S+  G  +TE   G+D  ++  
Sbjct: 100 -----ILKFGTDYQKKKYLPGLC-------------NGSLKGGHAMTEPDSGSDAFSMKC 141

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + +K  D         +  ++P++D  ++ A  + + G   +   + +    G    +  
Sbjct: 142 KAEKKGDRYIINGTKMFITNAPIADILLVFAVTDAKKGFAGISTFIVEKGFPGFSVGKPL 201

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333
           + +G ++    E+   +        L             +  + + +    V  M   L 
Sbjct: 202 DMMGLKTCPLGEVILQDCEVPEENRLGKEGAGAAIFNSEMEWERSCLFATHVGAMGRDLE 261

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E I Y   RH     +     +   IAD+ + +  +  + +++A    + +    E+A  
Sbjct: 262 ECIRYVNDRHQFEKPIGKYQAISHKIADMQVRLELSRLVLYKVAWLKAQGQRAPVESA-- 319

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                I K +  +       EA++  G  GY  E    R+ R+S A  I  G+       
Sbjct: 320 -----IAKLFVSESYVENCMEALQIHGAYGYSAEMDFERNLRDSIAGKIYSGTSEIQKNV 374

Query: 454 VLNLL 458
           + +LL
Sbjct: 375 IASLL 379


>gi|300869435|ref|ZP_07114020.1| Acyl-CoA dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|300332565|emb|CBN59218.1| Acyl-CoA dehydrogenase [Oscillatoria sp. PCC 6506]
          Length = 394

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 128/373 (34%), Gaps = 34/373 (9%)

Query: 89  PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  +R D+ E   P    ++++    G   +I    +  +                    
Sbjct: 26  PHADRIDREERTTP---EIIQKLAQKGYLGAILPEEWGGMGMDAIAYGLLNEEIGRGCSS 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L++     A  +    +    + W  K+ S                     L+E   
Sbjct: 83  LRCLLTVHSMVAHAILKWGSKFQKEYWLTKLASG-------------DAIAAFALSEPNI 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ +  +   D        KW     ++D F++ A+ EG+   FLV     + + 
Sbjct: 130 GSDAKAVETTAKLSGDSYILNGQKKWITYGQIADVFLVFAKWEGKPSAFLV-----EKNS 184

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL  + +   +G + +   EL  +N        +    G          LD    SV+ 
Sbjct: 185 PGLSIKPIFGMLGVKGSMLAELHLNNCRIPQENLVCR-QGFGFSHVASSALDLGRYSVAC 243

Query: 328 MRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V +A+A       Y  +R      L +  ++++ I +   +I AA  L ++     D 
Sbjct: 244 GCVGIAQACLEACIEYTSKRKQFDVYLKEHQLIRQMITEAIANIKAARLLCYQAGYLKDI 303

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S       +   I KY+   +A  V  +A++  G +G   +  + R+ R++    I
Sbjct: 304 GDPNS------IMETSIAKYFASTIATKVANDAVQIHGANGCSSQYPVQRYLRDTKIMEI 357

Query: 443 LLGSGNAMVLDVL 455
           + GS     + + 
Sbjct: 358 IEGSTQIQQITIA 370


>gi|268576737|ref|XP_002643348.1| Hypothetical protein CBG15945 [Caenorhabditis briggsae]
 gi|187026809|emb|CAP34382.1| hypothetical protein CBG_15945 [Caenorhabditis briggsae AF16]
          Length = 413

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 129/379 (34%), Gaps = 34/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +DK   +P    +++++   G   +    ++  +          +          
Sbjct: 50  PVAAEYDKTMEYP--WPIIKKAHAQGYLIADIPEAYGGLGVDMVSNCIISEEMAYGCSGI 107

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  + + + L     + K +  ++    +                  +TE   G
Sbjct: 108 ATAIMANDLALTPLILCANDDIKKRFLTRMVENPF-------------VASYAVTEPGAG 154

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+A + ++ +K  D         W  ++  ++ F +LA+ +              + +G
Sbjct: 155 SDVAGVKTKCEKKGDEYILNGSKMWITNAGHANWFFVLARSDPNPKTPAGKAFTAFVVEG 214

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMS 324
              GL   R +  +G R + T  + F +         NV   P E  K+ +   D    +
Sbjct: 215 DSPGLTRGRKEINMGQRCSDTRGITFEDVRVPA---ANVVGAPGEGFKVAMKTFDKTRPT 271

Query: 325 VSGMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+ +        L  A  Y+  R   G  + +   +   +A++A++   A  ++++    
Sbjct: 272 VAALATGVTYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINAELARLMTYKSGAE 331

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +  S         A I K +      +    A++  GG+G+  E    +  R++  
Sbjct: 332 VDAGRPGS-------YYASIAKLFASDAVNSAATNAVQVFGGAGFNTEYPAEKLMRDAKI 384

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 385 FQIYEGTSQIQRMVIARQL 403


>gi|163788944|ref|ZP_02183389.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159876181|gb|EDP70240.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 600

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 135/380 (35%), Gaps = 43/380 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++R++   G        ++  +                                +M + 
Sbjct: 64  DVMRKAGELGFLGVAVPEAYGGLGMGFVSTCLTCDYISSGTGSFSTAFGAHTGIGTMPIT 123

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ + E+                  LTE   G+D  +  +  +  +D
Sbjct: 124 LYGTEEQKQKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTTAELSAD 170

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS---PNGLCYQRLKNK 278
           G          W  ++      I+ A++E       +   + +     PNG+     ++K
Sbjct: 171 GKSYKINGQKMWISNAGFCSLMIVFARIEDDK---NITGFIVEYDGDNPNGVTLGEEEHK 227

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSL 332
           +G R+++T ++ F++T   +    N+  G  E  KI +  L+   + ++       R  L
Sbjct: 228 LGIRASSTRQVFFNDTVVPVD---NMLAGRGEGFKIAMNALNVGRIKLAAACLDSQRRIL 284

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------- 385
             A++YA  R      + D   +K  +A +A D  A  + ++R A + ++  +       
Sbjct: 285 TTAVNYANERKQFKTPISDFGAIKMKLAKMAADAYAGESATYRAAKNIEDRIAIRETSGN 344

Query: 386 RSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             +EA         I   I K    +       E ++  GG G+ EE  +   +R++   
Sbjct: 345 SHQEAELKGVEEYAIECSILKVAVSEDVQNCADEGIQIFGGMGFSEETPMEAAWRDARIA 404

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+     +  + +L K
Sbjct: 405 RIYEGTNEINRMLSVGMLVK 424


>gi|319951364|ref|ZP_08025189.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319434961|gb|EFV90256.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 379

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 131/399 (32%), Gaps = 29/399 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + S  A EL  M      +L    P     ++   +P    L  +    GL    +  
Sbjct: 5   RLLPSDEAYELLEMTRSVADKLLE--PVAAEHERNHTYPEG--LFAQLGEVGLLGLPYPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            F    +     ++                S    S   +A   T     +W P + + E
Sbjct: 61  EFGGGDQPYEVYLQVLEELGARWAAVAVATSVHGLSCFPLATAGTDEQKAEWLPGLLAGE 120

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                              L+E + G+D AA+  + ++  D         W     ++D 
Sbjct: 121 Q-------------IGAYSLSEPQAGSDAAALRCRAERDGDAYVVTGTKSWITHGGIADV 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           +    +     G   +  LL       L + + ++K+G     T    +  T    G L+
Sbjct: 168 YNTFVRT--GEGSRGISCLLVPRDTENLHFGKPEDKMGLNGVPTTTASYEGTRIDAGRLI 225

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G                 L  A ++    + +L +A+ YA  R   G  +I    +   +
Sbjct: 226 GAEGEGLRIAFSALDSGRLGIAAVATGIAQRALDDAVAYANEREAFGKTIIGHQGLGFLL 285

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  +A+A A     A   D  +  S E       A I K      A  V  +A++ +
Sbjct: 286 ADMAAAVASARAAYLDAARRKDAGRPYSRE-------ASIAKLTATDAAMKVTTDAVQVL 338

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY  E  + R+ RE+    I  G+     L +   L
Sbjct: 339 GGVGYTREFPVERYMREAKITQIFEGTNQIQRLVIARSL 377


>gi|120402970|ref|YP_952799.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955788|gb|ABM12793.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 392

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/370 (18%), Positives = 131/370 (35%), Gaps = 30/370 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 42  ELREQAKSMGLFGYAIPQEWGGLGLDLTQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W  +I S E             V     LTE   G++ + + ++  +  D
Sbjct: 102 GYGTDEQKSTWLERIASGE-------------VVASFALTEPGAGSNPSGLRTKAVRDGD 148

Query: 224 GI---YCLSGHKWFLSS-PMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G    + ++G K F+++ P ++ F+  A+          +   L      G+       K
Sbjct: 149 GSCSGWIINGQKRFITNAPNANLFVTFARSRPADDKGAGIAVFLVPADTPGVEVGAKDKK 208

Query: 279 IGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +G     T ++ F++        + G  ++             +  A ++V   + +L E
Sbjct: 209 MGQEGAWTADVNFTDVRVPDAALVGGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDE 268

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           ++ YA      G  + D  +++  +AD    + A  AL    A  +   + R       R
Sbjct: 269 SVTYAATATQGGTAIGDFQLVQAMLADQQTGVMAGRALVRETARQWVTGEDR-------R 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I     K +C +MA  V   A++  GGSGY+ E  + R YR+     +  G+     L +
Sbjct: 322 IAPSAAKLFCTEMAGKVADLAVQIHGGSGYMREVPVERIYRDVRLLRLYEGTSEIQRLII 381

Query: 455 LNLLEKGTNL 464
              L KG   
Sbjct: 382 GGGLVKGAKA 391


>gi|226362136|ref|YP_002779914.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240621|dbj|BAH50969.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 389

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 135/366 (36%), Gaps = 28/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            + R++   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 42  DIRRKAAEMGLFGYAIPQQWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W  +I S               V     LTE   G++ A +T++   + D
Sbjct: 102 NFGTDEQKSEWLERIASG-------------DVVASFALTEPEAGSNPAGLTTRAV-LKD 147

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + ++G K F+++ P++D F++ A+          +   L      G+       K+G 
Sbjct: 148 GKWTINGTKRFITNAPLADLFVVFARTRPADETGTGIAVFLVPADTAGVVVGPKDKKMGQ 207

Query: 282 RSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
               T E+ F +        + G                 +  A ++V   + +L E++ 
Sbjct: 208 EGAWTAEVAFDDVTVPGSALVGGSEEAGYRAAMTSLARGRVHIAALAVGSAQRALDESVA 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A      G  + D  +++  +AD  + ++A  AL    A  +   + R       RI  
Sbjct: 268 FAAVTKQGGTPIGDFQLVQAMLADQQVGVSAGRALVRDAAQKYVSGEDR-------RIAP 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +C +MA  V   A++  GG+GY+ +  + R YRE     +  G+     L +   
Sbjct: 321 SVAKLYCTEMAGKVADLAVQVHGGTGYMRDVPVERIYREVRLLRLYEGTSEIQRLIIGGG 380

Query: 458 LEKGTN 463
           L +   
Sbjct: 381 LVREAK 386


>gi|295836729|ref|ZP_06823662.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697599|gb|EDY44532.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 385

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 80/387 (20%), Positives = 145/387 (37%), Gaps = 40/387 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G+         A      +    G+        +     +++ K +A    
Sbjct: 27  PRHEEWVAAGQ---------APRDFYYKLGELGIFGIEVPEEYGG-AGEESFKFQAILSE 76

Query: 142 LMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A+       S    +  +  L    T    K W P   S                   
Sbjct: 77  ETARAGVSLGGSGVHVALCLPYLKAYATEEQKKRWLPDFVSG-------------RTMFA 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVEGRV---G 254
           + +TE   G+D+A + +  +  +DG  Y L+G K F++  + +D  I+ A+         
Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGRHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
            F +  L+ D    G    R  +K+G +++ T EL F++       LLG+ N     +  
Sbjct: 184 RFGISLLVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVQVPVADLLGEENKGFHYLGQ 243

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+ + +    ++  A  Y + R V G  +      K  +A    ++ AA A
Sbjct: 244 NLPQERLGIAVGAYAQAAAAVRFAQSYVQDRTVFGKPVAAFQNTKFELAACKAEVDAAEA 303

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +  R   + D  +  + EAA A       K +C ++A  VI   ++  GG GY+ E  IA
Sbjct: 304 VCDRALEAHDLGELTAAEAASA-------KLFCTEVASRVIDRCLQLHGGYGYMNEYPIA 356

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R Y ++  N I  G+   M + +   +
Sbjct: 357 RLYADNRVNRIYGGTSEVMKMIIAKSM 383


>gi|259415585|ref|ZP_05739506.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp.
           TrichCH4B]
 gi|259348815|gb|EEW60577.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp.
           TrichCH4B]
          Length = 378

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/352 (17%), Positives = 122/352 (34%), Gaps = 25/352 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G+       +   +         A      A      +++    +   + L     +
Sbjct: 46  AEMGIMGMNLPEAHGGIGLSGPALYCAVEAIAAACGSTASMLTAHFLATDSLLLGADEAL 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +   P                         LTE   G++ A + S   +  DG +    
Sbjct: 106 QQRILPA-------------AAAGQALGAFALTEPMAGSNPADMRSTATRDGDGYWLKGS 152

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVEL 289
             +  ++  +D  ++ A+ +  VG   V   + + G  +G+   + +  +G R      +
Sbjct: 153 KCFISNAGEADFIVVYAKTDSAVGARGVSAFVVEPGKTDGVEIGKREETMGLRGGHVFPI 212

Query: 290 EFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F          L    TG    MK+L    ++ A  +    R +L  A+ YA+ R V G
Sbjct: 213 SFD-CRVPAENQLGDEGTGFRTAMKVLDNGRIEVAAQATGIARAALGAAVSYAKEREVGG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +AD A ++AAA AL  + A      +  S ++A+A       K +  +
Sbjct: 272 RPIGSFQGLQWMLADSATELAAARALGLQAARKRGTGERYSTDSAFA-------KLYASE 324

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A  +   A++  GG GY  +  + R+ R+     I  GS       +   +
Sbjct: 325 AAWRIADRALQIHGGYGYTRDFPLERYLRDLRIFRIYEGSSEIQRTIIAREM 376


>gi|297560395|ref|YP_003679369.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844843|gb|ADH66863.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 409

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 131/389 (33%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+   +  +           +    LY       
Sbjct: 34  PAAAEWDEREETP--WPIIQEAAKIGLYSLDFFANQWLEPSGVGIPVAFEELY-WGDPGI 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++ +  +A  VA   T     +W P++F    D                  +E   G
Sbjct: 91  ALAITGTGLAAVSVAANGTQEQLFEWTPQMFGTPDDIR----------LAAFCSSEPDAG 140

Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D++AI ++       D         W  +  ++D  +++A VE  +G       +   +
Sbjct: 141 SDVSAIRTRAVHDQAKDEWVLNGTKTWATNGGIADIHVVVASVEPELGSRGQATFIVPPN 200

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   +   K G R++ T E+   +                           +     
Sbjct: 201 TPGLSQGQKFAKHGIRASHTAEVVLDDVRVPGSCLLGGKEKLDERLARAREGRGSKGQAA 260

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A  Y+ +R   G  + +   +   +A++A  I AA
Sbjct: 261 MKTFEASRPTVGAMAVGCARAAYEYARDYSTQREQFGRPIGENQGVAFTLAEMATRIDAA 320

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A      K              ++K +  + A  V   A+  +GG+GY  +  
Sbjct: 321 RLLVWRAAWMARNDKDFDSAQG------SMSKLYASETATFVTQNAVRILGGNGYTRDYP 374

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R+S   +I  G+     L +   +
Sbjct: 375 VERWHRDSTIFTIFEGASEIQKLIIGRAV 403


>gi|226952421|ref|ZP_03822885.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226836873|gb|EEH69256.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 379

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 138/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGKNGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + T    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTDPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F + +      LG+       +        L  ++
Sbjct: 188 TLDGVKKGRSLQKIGLHAQDTAELFFDDVYVPASQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGSILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +       VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDAQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|226361951|ref|YP_002779729.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240436|dbj|BAH50784.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 123/359 (34%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               RR+   GL        F     R            +            +       
Sbjct: 42  RDFWRRAAAQGLVGFAAPEEFGGGGLRDFRFNAVLNEEVVRTGTVGDGFSLTNDIVLPYF 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +      K W P I S E               I + ++E   G+D+ AI +  ++  
Sbjct: 102 LDIADEAQQKRWLPDIVSGE-------------RTIAVSMSEPGTGSDLRAIKTTARREG 148

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        +  S   +D  I+ A++    G       + +    G    R  +KIG +
Sbjct: 149 SGWRITGSKTFVTSGMQADLVIVAARIPDEDG-GGFGLFVVEDGQPGFERGRKLSKIGRK 207

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F N       +LG+       +        L  A+++V+    +L  A+ YA
Sbjct: 208 AQDTAELFFQNVEVQPENVLGEAGKGLRYLMANLAQERLSMAVVAVASAEYALELALSYA 267

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +      +  +A+++  +  A     R  ++    +  + +AA A      
Sbjct: 268 KERRAFGSPIGSFQANRFTLAELSTKVQIARIYLDRCLDAHGNGELTAADAAGA------ 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K+W  ++    +   ++  GG GY+EE  +AR +R+S    I  G+   M   V   L
Sbjct: 322 -KFWTTELEFEALDTCLQLHGGYGYMEEYEVARRWRDSRVQQIYGGTNQIMREIVGRSL 379


>gi|260558129|ref|ZP_05830339.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
 gi|260408402|gb|EEX01710.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           19606]
          Length = 385

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 143/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P    W++    P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPHIP---EWEEAGRFP-IHDVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGRAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +  ++       +A + K    +++  V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLSREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|305677907|pdb|3OIB|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis, Iodide Soak
 gi|305677908|pdb|3OIB|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis, Iodide Soak
 gi|309320750|pdb|3P4T|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis
 gi|309320751|pdb|3P4T|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase
           From Mycobacterium Smegmatis
          Length = 403

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 134/374 (35%), Gaps = 25/374 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L R++   GL  + +           A  +        A    
Sbjct: 47  PHAHEWERAGEIP--RELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPG 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G   S      ++  ++ +                  T   P  +      L +TE  GG
Sbjct: 105 GVYASLFTCGIAVPHMIASGDQR-----------LIDTYVRPTLRGEKIGALAITEPGGG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + ++     D  Y ++G K +++S +   +++ A   G  G   V  ++ D    
Sbjct: 154 SDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVSLIVVDKGTP 212

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  + 
Sbjct: 213 GFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAY 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +G +  L   + + R R   G  LI +  ++  +A +A  I  A   +  +       ++
Sbjct: 273 AGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGET 332

Query: 386 RS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I  
Sbjct: 333 NLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGIGG 385

Query: 445 GSGNAMVLDVLNLL 458
           G+   +       L
Sbjct: 386 GTTEILTSLAAKTL 399


>gi|301061812|ref|ZP_07202545.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300444102|gb|EFK08134.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 387

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 141/392 (35%), Gaps = 28/392 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q L  MA     +     P  + WD+  + P +   ++     G   ++   
Sbjct: 2   DFGLNEELQMLRDMARDFAAE--KIAPFADEWDENHYFP-YEEAVKPMGELGFFGTVIPE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +          I        A       +   ++  A  +    T  + + + PK+ S 
Sbjct: 59  QYGGNEMGWLAAIILTEEIARASSSLRVQINMQTLGCAFTIFRYATDEIKEKYIPKLVSA 118

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY               G G+TE   G+D+ A+ S  Q   D         W  ++ ++D
Sbjct: 119 EYMG-------------GFGITEPNAGSDVMAMKSTAQDKGDHWLINGSKTWISNTSVAD 165

Query: 242 AFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           A I  A  +       +    +E  + NG+    L +K+G+RS+ T E+   +T      
Sbjct: 166 ALIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSSPTGEIYLEDTKVPKEN 224

Query: 301 DLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L         V        L +A   +   +  L     Y + R   G  +    + + 
Sbjct: 225 ILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAVTSYCQEREQFGKSIGQFQMNQD 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +  I  ++ AA  + ++ A   D+    +       +     KY   ++A      AM+
Sbjct: 285 MVGQITSELEAARLVVYKAAWQKDQGNLGN------TLEVAQAKYVAGEIAVKASQVAMK 338

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            +G  GY  E  +AR+YR++P   ++ GS N 
Sbjct: 339 ILGAYGYSTEYPVARYYRDAPTYQLVEGSTNI 370


>gi|297190609|ref|ZP_06908007.1| long-chain-acyl-CoA dehydrogenase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197717921|gb|EDY61829.1| long-chain-acyl-CoA dehydrogenase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 380

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 125/369 (33%), Gaps = 30/369 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D +    AW A    +   GL        +         +       +  A      +  
Sbjct: 35  DGIVSRDAWLA----AGRQGLLGLAVPEEYGGGGNDDFRYAAVLHEEFTRAGAPGLAIGL 90

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +  + T    + W P   S E             +   + +TE   G+D+  
Sbjct: 91  HNDIIGPYLTSLATDEQKRRWLPGFCSGE-------------IITAIAMTEPGAGSDLQG 137

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           I +  +   D  + L+G K F+S+ + +D  I++A+     G   +  L+ +    G   
Sbjct: 138 IRTTAEDRGDH-WLLNGSKTFISNGILADLVIVVAKTTPEGGAHGLSLLVVERGAEGFER 196

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMR 329
            R  +KIG +S  T EL F++        L    G    +        +  A+  ++   
Sbjct: 197 GRNLDKIGQKSQDTAELFFNDVRVPKENLLGELNGAFIHLMTNLAQERMAIAVAGIAAAE 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L     Y + R   G  L     ++  IA++A + A   A         D   +    
Sbjct: 257 HLLEITTEYVKEREAFGRPLARLQHIRFEIAELATECAVTRAF-------LDRCITDHTN 309

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                + A + K+W  ++        ++  GG GY+ E  +AR + +    +I  G+   
Sbjct: 310 GELDAVHASMAKWWATELQKRAADRCLQLHGGYGYMNEYRVARAFTDGRIQTIYGGTTEI 369

Query: 450 MVLDVLNLL 458
           M   +   L
Sbjct: 370 MKEIIGRSL 378


>gi|298290808|ref|YP_003692747.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506]
 gi|296927319|gb|ADH88128.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506]
          Length = 412

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 121/365 (33%), Gaps = 25/365 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL        +        ++ + A  +  +       +   S      +
Sbjct: 70  REIMNEMGELGLLGPTIPEEYGGAGLGYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPI 129

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + PK+ + E+                 GLTE   G+D A + ++ +KI 
Sbjct: 130 NAYGTEAQKKRFLPKLATGEW-------------IGCFGLTEPDAGSDPAGMRTRAEKID 176

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D  ++ A+         +   L +    G    +++NK+  R
Sbjct: 177 GGYRLTGSKMWITNSPIADVAVVWAKS--AAHDNDIRGFLVERGAKGFSTPKIENKLSLR 234

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++ T E+            L  ++G       L          ++       A A  Y  
Sbjct: 235 ASITGEIVLDGVEVPEESLLPGASGLKGPFGCLNRARFGIGWGTIGAAEACYASARQYTL 294

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+A +IA    L+ R    FDE +   E  +  +      
Sbjct: 295 DRKQFGKPLAATQLIQKKLADMATEIALGLQLALRAGRLFDEGQLPVEAISMLKR----- 349

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               C  A  +   A +  GG+G   E  + RH       +   G+ +   L +   +  
Sbjct: 350 --NNCGKALDIARLARDMHGGNGISAEFPVMRHMVNLETVNTYEGTHDIHALILGRAITG 407

Query: 461 GTNLF 465
               F
Sbjct: 408 HQAFF 412


>gi|17545475|ref|NP_518877.1| glutaryl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17427767|emb|CAD14286.1| probable glutaryl-coa dehydrogenase oxidoreductase protein
           [Ralstonia solanacearum GMI1000]
          Length = 435

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 148/434 (34%), Gaps = 36/434 (8%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
            SD    A+ A         L LL   +           A Y   +L        R +K 
Sbjct: 31  RSDPETTAMTARNAFHWADPL-LLDAQLTDDERMVRDAAAAYAQDKLMPRVLESFRHEKT 89

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SV 156
           +      A+ R     G+        +             AR           +MS  S 
Sbjct: 90  DT-----AIFREMGALGMLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSS 144

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +    + + P++ + E+                 GLTE   G+D A++ +
Sbjct: 145 LVMVPIHAFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVT 191

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + +K+  G        W  +SP++D F++ A++    G   +   + +    GL    + 
Sbjct: 192 RAKKVDGGYSLSGAKMWITNSPIADVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPAIH 251

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+G R++ T E+     F     + N+  G          L+SA   ++   +  AE+ 
Sbjct: 252 GKVGLRTSITGEIVLDEVFVP---EENLMPGVHGLKGPFTCLNSARYGIAWGALGAAESC 308

Query: 337 HYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            +  R     R   G  L    ++++ +AD+  +I        RL    DE  +      
Sbjct: 309 WHTARQYVLDRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA------ 362

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  +  I K   C  A  +   A + +GG+G  +E  + RH       +   G+ +   
Sbjct: 363 -AVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHA 421

Query: 452 LDVLNLLEKGTNLF 465
           L +L   + G   F
Sbjct: 422 L-ILGRAQTGIQAF 434


>gi|226308416|ref|YP_002768376.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187533|dbj|BAH35637.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 143/376 (38%), Gaps = 33/376 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P   +L R+    G+        +     + + K +A      A+       
Sbjct: 31  EWEEAGMVP--RSLYRQLGDLGIFGIELPEEYGG-GGETSFKYQAVIREETARAGVTFGA 87

Query: 153 SPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               T   +  L           W P   S E             +   + +TE   G+D
Sbjct: 88  DVVHTCLVLPYLVEYGNDEQKARWLPGFLSGE-------------LMTAIAMTEPGAGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF---LVPRLLEDG 265
           +A I +  +   DG  Y L+G K F++  + +D  +++A+            +  L  D 
Sbjct: 135 LAGIKTTARLSGDGSHYMLNGSKTFITGGVQADLILVVARTSPAGDADRRAGLSILCVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    R   K+G R+  T EL F++       LLG+     G +    +   L +A+
Sbjct: 195 TSEGFSVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGYLTRNLVRERLGAAV 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S +    ++  A  Y + R V G  +      K  +A+ + ++AAA A   R  +  + 
Sbjct: 255 GSYANASAAIEFATAYVKEREVFGTPVAQFQNTKFVLAECSAEVAAAQAAVDRALDLDEI 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA         K +C +MA  VI + ++  GG GY+ E  I+R Y ++  N I
Sbjct: 315 RELTVADAAR-------IKLFCTEMAGRVIDKCLQLHGGYGYMREYPISRLYADTRVNRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M   +   +
Sbjct: 368 YAGSSEVMKTIIAKDI 383


>gi|304312504|ref|YP_003812102.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798237|emb|CBL46459.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 385

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 138/370 (37%), Gaps = 27/370 (7%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P    W+     PA H L ++  + GL    +  ++  +    ++++      +M + 
Sbjct: 22  INPHVPEWEAARTFPA-HELFKKMGNLGLLGIKYSPNYGGMGLDISYQL------VMNEE 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +  +   M TP +H+       S E      AP     +   +G++E  
Sbjct: 75  LGMINCGGIPMAIGVQTDMCTPALHRFG-----SDELKREYLAPAIAGDMVGCIGVSEVA 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+AA+ +  +   D         W  +   +D   +LA             ++    
Sbjct: 130 GGSDVAALKTTARSEGDDYVINGSKMWITNGTQADWCCLLANTSEGPVHANKSLIIVPMD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G+ +Q+++ KIG  S+ T +L F N        + +       M  +I      +  +
Sbjct: 190 AAGISHQKIE-KIGMHSSDTAQLFFDNVRVPKRNRIGIEGAGF--MMQMIQFQEERLCAA 246

Query: 327 GMR-----VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                     +   I Y + RH  G  LI+   +   +A++  ++    +L++R  N + 
Sbjct: 247 SGALKSLDRLIDLTIEYCKERHTFGQPLINNQAIHFRLAELRTEVELLRSLTYRAVNEYI 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  +        +A + K    ++   V    ++  GG G+  +  +++ YR+S   S
Sbjct: 307 SGKDVTR-------LASMAKLKAGRLLREVSDSCLQYWGGMGFTYDNPLSQSYRDSRLIS 359

Query: 442 ILLGSGNAMV 451
           I  G+   M+
Sbjct: 360 IGGGADEIML 369


>gi|119370276|gb|ABL68070.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82]
          Length = 352

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 132/353 (37%), Gaps = 39/353 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P  +  D+ E  PA    +++    G       + +         + +    L  +    
Sbjct: 26  PLAQETDETEAFPA--ETVKKMQKYGFMGIPVPKEYGGQGCDPLTYVMCVEELSKVCATT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +      +    T    + +   + + E                   LTE   
Sbjct: 84  GVVVSAHTSLCIDPIMTYGTEEQKQKYVKPLATGE-------------KLGAFALTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVG--CFLVPRL 261
           GTD     ++     D  + L+G K F+++  ++D +I++A     E + G         
Sbjct: 131 GTDAQGAQTKAVLDGDE-WVLNGSKCFITNGKVADVYIVIAITSITEDKRGRKKKNFSAF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS 320
           + D    G  +   + K+G R ++T EL F +     +   N+     +   I ++ LD 
Sbjct: 190 IVDKGAPGFSFGTKEKKMGIRGSSTYELIFEDCR---IPKENLLGPEGKGFPIAMHTLDG 246

Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + +AE     AI Y + R   G  +  Q   +  +AD+A  I AA  L ++
Sbjct: 247 GRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAARIEAAQLLVYK 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A +    K  S EAA A       K +  + A AV  E ++  GG+G+ ++ 
Sbjct: 307 AAMAKATQKVYSVEAAKA-------KLFAAETAMAVTTEVVQLFGGNGFTKDY 352


>gi|108763214|ref|YP_628693.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108467094|gb|ABF92279.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 604

 Score =  234 bits (597), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 91/582 (15%), Positives = 207/582 (35%), Gaps = 91/582 (15%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
           +      +++  +   + +    +      +N P+L           +V   P     + 
Sbjct: 36  DLDETAARQMLQMFAQLSTNELAQSFEEPEHNPPKLEN--------GEVTLPPGLKKAMN 87

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G+H          +    +    A  L + A          ++  A ++  + T 
Sbjct: 88  AFFDAGMHLLEQPPHLGGLGAPPSLGWAAFELLVGANASLAFYTLGNLL-ARIIDRLGTD 146

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P +  R +                + LTE   G+D+ A  ++ +++SD ++ +
Sbjct: 147 AQKQRFLPHMLDRRW-------------GGSMVLTEPDAGSDVGAARTKARRVSDDVWEI 193

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCY 272
            G K F+++  SD       ++LA+ EG       +  F+VP+   +     G  NG+  
Sbjct: 194 EGVKRFITNGDSDMSENIIHMVLARPEGAAPGTKGLSLFVVPKYWVNEDGSLGEANGVVC 253

Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +L+ K+G + + T E+ F +     G LLG+++     +  +     +   + S++ + 
Sbjct: 254 TKLEKKMGLKGSVTCEMTFGDGKPCRGLLLGEVHDGIRQMFYIIEQARMAVGVKSMATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ +++ R                  +   P ++R +           AL    A
Sbjct: 314 AGYGRALAFSKDRLQGADLMQARDKTAPRVPIFRHPDVRRMLMAQKAHAEGMRALCLYTA 373

Query: 378 NSFD--------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
              D         A    E      ++ P+ K +C + A  ++A +++  GGSGY+++  
Sbjct: 374 FIQDGVERKGGHRATEAGELDTLNDMLLPLVKGYCSEKAYELLALSLQVHGGSGYLQDYP 433

Query: 430 IARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVIT 485
           + ++ R+   +++  G+ +   LD+L   +   G    + L S + +  +    GK++  
Sbjct: 434 VEQYIRDQKIDTLYEGTTHIQALDLLMRKVARDGGATLQGLLSQIRETAERTGEGKELEA 493

Query: 486 ILRDSISLCKEDKGLARFLTEKIA------------LASSAA------ALYRAGMNDIAD 527
                     + + +   L  K+             + ++ A       L R     +  
Sbjct: 494 ERAALGRALGDLETMLGTLMGKLGESIYHVGLQGNRVLAAVAEVVIGWLLVRHAEVALER 553

Query: 528 --------VFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYLD 561
                    F   +        H +L G  +AA +++   LD
Sbjct: 554 MKSNPGDRAFYVGKLASARWFCHEVLPGVAHAARMVEHGNLD 595


>gi|284042015|ref|YP_003392355.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946236|gb|ADB48980.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 382

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 127/360 (35%), Gaps = 25/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  +    GL    +   +          ++A      A    G  +S  V S   +A
Sbjct: 42  RDVFAQLGELGLLAMPYPERWGGAGLPYEIYLQALEEIGGAWASVGVGVSVHVMSCWPLA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + W P              +   ++  G  L+E   G+D  A+ ++ ++  D
Sbjct: 102 TFGGDEQRERWLPD-------------LLGGTLLGGYCLSEADAGSDPGAMRARAKRDGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W      +D + + A+     G   +   L  G   GL  Q  + K+G   
Sbjct: 149 GFRVTGSKAWVTHGGEADFYTLFART--GEGSRGISCFLAPGQAGGLTSQSPERKMGLTG 206

Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  ++F +       L+G                 L  A ++V   + +L  A+ +AR
Sbjct: 207 STTATVDFDDVALERDRLVGAEGEGLAIALQALDSGRLGIAAVAVGLAQAALDHAVDHAR 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +I+   +   +AD+A  + +A A     A   D     S  AA       I 
Sbjct: 267 QRQTFGKPIIEHQGLGFLLADMAAAVESARATMLEAARRRDRGLPFSRHAA-------IA 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K      A  V  +A++ +GG+GY ++  + R  RE+    I  G+     + +   L +
Sbjct: 320 KLVATDAAMQVSTDAVQVLGGAGYTQDFPVERMMREAKVMQIFEGTNQIQRMVIARHLAR 379


>gi|327274792|ref|XP_003222160.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Anolis
           carolinensis]
          Length = 433

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 143/387 (36%), Gaps = 24/387 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ I  A      
Sbjct: 67  KEINPFVDKWEEEGQFPA-HQVFKSLGKAGFLGVNKPTEYGGLGLDYSYCIAVAE----- 120

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G++    V  A  V A M TP + +       S E      AP     V   LG++
Sbjct: 121 --ELGNIRCGGVPMAIGVQADMATPALARFG-----SDELKREFLAPTIAGDVVACLGVS 173

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I ++  +  D      G  W  +   +D   +LA             L  
Sbjct: 174 EPGAGSDVASIKTKAVRKGDDYNINGGKMWITNGCQADWMCLLANTSDGPPHKNKSLLCL 233

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
               +G+   +  +K+G RS+ T ++ F +      +L+G+  +             +  
Sbjct: 234 PMKTSGVHIAKKIDKMGMRSSDTAQIFFEDVRVPSKYLIGEEGMGFIYQMLQFQEERMWG 293

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +  +   + E I+Y R+R +    +I + ++   +A++A ++    +L +R    +
Sbjct: 294 VANVLVPLENIIQETINYTRQRKIFNQPIIQKQIVHFRLAELATEVELLRSLLYRAVALY 353

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 ++        A + K     +A  V    ++  GG G+  E  ++R YR+    
Sbjct: 354 IHGNDVTK-------FASMAKLKAGYLAREVPDSCLQFWGGMGFTNEVLVSRLYRDLRLL 406

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           SI  G+   M+  +   ++      + 
Sbjct: 407 SIGAGADEVMLSIICKHMDILPKQQQA 433


>gi|26990069|ref|NP_745494.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Pseudomonas putida KT2440]
 gi|24984996|gb|AAN68958.1|AE016527_4 acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Pseudomonas putida KT2440]
          Length = 584

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 87/472 (18%), Positives = 168/472 (35%), Gaps = 51/472 (10%)

Query: 42  LLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KV 97
           +L   +    +         +   + +   +E AR        L++     G + +  +V
Sbjct: 13  VLQHWLRADQAWAQLPAYADVDLDLAAQVLEEAARFCEQVLAPLNSSGDRQGCQMEGGEV 72

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                + A  R  +  G        +          +     +   +          +  
Sbjct: 73  RTPDGFPAAYRAYVDGGWPSLACAPALGGQGLPLVLEAALQEMLFGSNHGWAMYTGIAHG 132

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    +  +   + P I S              +    + LTE + G+D++ +  +
Sbjct: 133 AYLCLKAHASAELQARYLPGIVSG-------------ATLPTMCLTEPQAGSDLSLLRCR 179

Query: 218 GQKISDGI---YCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
              + DG    Y +SG+K F+S    D       ++LA++         +   LVP+ LE
Sbjct: 180 AVPLGDGGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAPPGNRGLSLLLVPKWLE 239

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           DG  N L    L++K+G R +AT  L      G+L+G  +     +  M     L   + 
Sbjct: 240 DGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLAAMFVMMNSARLHVGLQ 299

Query: 324 SVSGMRVSLAEAIHYARRRHVS---GG---------ILIDQPVMKRAIADIALDIAAATA 371
            +     +  +A  YA  R      G           +   P M+R + ++ +      A
Sbjct: 300 GLGHAEAAWQQARDYALERRQMSAPGRAKGGAQGADPIHLHPAMRRVLLELRVRTEGMRA 359

Query: 372 LSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           L++  A   D A +  E A        A ++ PI K    +   ++ ++A++ +GG GY 
Sbjct: 360 LAYWTAQWLDIADAAVEPAQRAKAATLAALLTPIVKAAFTEQGFSLASKALQVLGGYGYT 419

Query: 426 EERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQD 475
           +E +I +  R+S    I  G+       L +  +L  G   F  L S L  +
Sbjct: 420 QEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFALLLSELRTE 471


>gi|121605595|ref|YP_982924.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594564|gb|ABM38003.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 386

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 19/300 (6%)

Query: 174 WAPKI-FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           + P +    E       P  + +    + +TE   G+D A I +  +K  D  + L+G K
Sbjct: 96  YEPLLHCKGEQVERWLKPAIEGTRTCAITITESGAGSDAAGIKTHAKKT-DTGWVLNGSK 154

Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+S    SD F++ A+     G   +   + D    G    + +  +G R    +EL F
Sbjct: 155 HFISDGEWSDFFLVSAKT----GEKEISMFMVDKGLPGFTVGKDQKMMGLRGTPHLELFF 210

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLD-SAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            N       LLG+             ++ L      +V          + YA  R   G 
Sbjct: 211 DNVPLEAVTLLGEEGQGFKLAMGALNVVRLAQVGARAVGKASHVCELMVDYANERKQFGQ 270

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D  ++++ +AD  ++I AA  + +  A   D+     E+ A  ++ A  T       
Sbjct: 271 RIGDFQMVQQQLADSVIEINAARWMVYHAAWMLDQGMDAREQIAMVKVQAAETL------ 324

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFE 466
              V+  A++  GG G+ +E  I R+YR++    I  G+       +  + ++KG  LF+
Sbjct: 325 -GRVVDRAVQIFGGMGFCKELPIERYYRDARIYRIFDGTSEIHRSVIAKMVMKKGAALFD 383


>gi|94495180|ref|ZP_01301761.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425446|gb|EAT10466.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 385

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 132/359 (36%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMV 162
             L  ++   GL C+  D  +           +      M   + G  ++      A  +
Sbjct: 40  RELFLKAGEQGLLCTWADEKYGGAGIDDFRFEQIIIEENMRHGDIGFYINLHNDLVAPYI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A + T      W P I S E               + + +TE   G+D+A + +      
Sbjct: 100 AKLGTDEQKDRWMPGIVSGE-------------KILAVAMTEPSTGSDLAGMRTSAVDKG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D  + L+G K ++S+ +    +++A          +  ++ +    G    R   K+G +
Sbjct: 147 DH-WLLNGAKTYISNGILADLVVVAARTDPNSRHGLGLMVVERGMEGFERGRKLAKMGLK 205

Query: 283 SNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F++        L         +        L +AI  ++  + +    + Y 
Sbjct: 206 AQDTAELFFNDVRVPKGNVLGDPAQGFKYLARFLAQERLVAAIGFMATAQTAFDITLDYV 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +      +  +A +  ++ A      +     +  +  +E+A+ A+++   
Sbjct: 266 KERRAFGKPIGAFQNTRFKMASMRAELDALQTYVDQCVMLLNAGELTAEDASAAKLLT-- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 ++   V+ E ++  GG+GY+EE  I+R Y ++  + I  G+   M   +   L
Sbjct: 324 -----SELEGRVMDECVQLHGGAGYMEEYRISRMYTDARISRIFAGTSEIMREIIGRGL 377


>gi|77456345|ref|YP_345850.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77380348|gb|ABA71861.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 393

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 146/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A+ +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMIRDTAEQFAQQS-LAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLEIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGLQAF 392


>gi|257455634|ref|ZP_05620863.1| long-chain specific acyl-coa dehydrogenase [Enhydrobacter
           aerosaccus SK60]
 gi|257446917|gb|EEV21931.1| long-chain specific acyl-coa dehydrogenase [Enhydrobacter
           aerosaccus SK60]
          Length = 382

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 124/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                ++   G  C+     +        H+         A L        S   A  + 
Sbjct: 43  KEAWLKAGSMGFLCASMPEEYGGAGGDFRHEAALIYAQADAALSGFGGFLHSGIVAPYIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + +  + W PK+ + E             +   + +TE   G+D+ AI +   K  D
Sbjct: 103 HHGSEQQKQRWLPKMATGE-------------LVGAIAMTEPGTGSDLQAIKTYAVKDGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGN 281
             Y L+G K F+++      I++A + +   G   V  L+ E     G    R   KIG 
Sbjct: 150 D-YILNGSKTFITNGQLANLIIVACKTDREKGAQGVSLLVLETDGLAGFERGRNLEKIGL 208

Query: 282 RSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
            S  T EL F+N        L      G ++ M+ L    L  A+ +   ++ S+   I 
Sbjct: 209 SSQDTSELFFNNVRVPQKNLLGSVEGMGFIQLMQELPQERLIIALAAAGAIKKSIELTIE 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + RH     +      +  +A+   D  A  A+        D A             A
Sbjct: 269 YTKERHAFNKPVWSFQNTRFKLAECNADYLAVRAMC-------DAALEAHLNKKLTVQHA 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K +       V  E ++  GG GY+ E  IAR Y ++    I  G+   M       
Sbjct: 322 ALLKAFTTDKQAKVTDECLQLFGGYGYMLEYPIARLYADARVQKIYGGTNEIMKELASRF 381

Query: 458 L 458
           +
Sbjct: 382 M 382


>gi|254389511|ref|ZP_05004738.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294815887|ref|ZP_06774530.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326444228|ref|ZP_08218962.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197703225|gb|EDY49037.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294328486|gb|EFG10129.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 401

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 126/379 (33%), Gaps = 36/379 (9%)

Query: 96  KVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++E    +   ++      GL   +    +  +                  +    +++ 
Sbjct: 35  ELEHRDEYPTRIVEGLKELGLFGLMIPEEYGGLGESLLTYALCVEELSRGWMSVSGIINT 94

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A M+    T    + + P++   E             V     ++E   G+D++AI
Sbjct: 95  HFIVAYMIKQHGTREQRETFLPRMALGE-------------VRGAFSMSEPGLGSDVSAI 141

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSP-- 267
           TS+  +            W  +   S    +L + +     G      +   L +  P  
Sbjct: 142 TSRAVRDGGDHLLTGQKMWLTNGGTSTLVAVLVRSDEGHPEGTPPHRSMTTFLVEKEPGF 201

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLD 319
                GL       K+G +   T EL            L G        + D   +  ++
Sbjct: 202 GEVRPGLTIPGKIEKMGYKGVDTTELIMDGLRIPDDRVLGGATGRGFYQMMDGVEVGRVN 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A       R +    + YA++RH  G  + +   ++  +A++A  + AA A+    A  
Sbjct: 262 VAARGCGVARRAFELGVSYAQQRHTFGRPIAEHQAVQFRLAEMATKVEAAHAMMVNAARK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +    EA  A+ +A        +    V+ ++    GG G+ +E  I R YRE+P 
Sbjct: 322 KDSGERNDLEAGMAKYLAA-------EYCKEVVEDSFRIHGGYGFSKEYEIERLYREAPM 374

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 375 LLIGEGTAEIQKMIIGRRL 393


>gi|256396869|ref|YP_003118433.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256363095|gb|ACU76592.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 397

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 123/359 (34%), Gaps = 32/359 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL   +    +  +                  +    +++     A M+    T    
Sbjct: 52  EMGLFGLMIPEEYGGLGESLLTYALVVEEIARGWMSVSGILNTHFIVAYMIKQHGTDEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P++   E             V     ++E   G+D+AAIT++G    D        
Sbjct: 112 QHFLPRMAEGE-------------VRAAFSMSEPALGSDVAAITTKGVPDGDDYVINGQK 158

Query: 232 KWFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRS 283
            W  +   S    +LA+ +         +  FLV +    G    GL       K+G + 
Sbjct: 159 MWLTNGGSSTLVALLARTDLGEAAAHKNLTTFLVEKPAGFGEVAPGLTVPGKIAKMGYKG 218

Query: 284 NATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T EL  S+        L G        + D   +  ++ A  +      +      YA
Sbjct: 219 VDTTELVLSDYRIPANRILGGAPGKGFAHMMDGVEVGRVNVAARACGIAVRAFELGAAYA 278

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           ++R   G  +     ++  +A++ + + AA A+  R A   D  +    EA  A+ +A  
Sbjct: 279 QQRTTFGKPIAQHQAIQFKLAEMGVKVEAAHAMMVRAAKVKDAGRRNDLEAGMAKYLAA- 337

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 +    V+ ++    GG GY +E  I R YRE+P   I  G+     + +   L
Sbjct: 338 ------EYCKEVVEDSFRIHGGYGYSKEYEIERLYREAPMLLIGEGTAEIQKMIIGRRL 390


>gi|91214823|ref|ZP_01251796.1| YusJ [Psychroflexus torquis ATCC 700755]
 gi|91187250|gb|EAS73620.1| YusJ [Psychroflexus torquis ATCC 700755]
          Length = 602

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 80/465 (17%), Positives = 162/465 (34%), Gaps = 48/465 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
             ++R++   G         ++ +       +        A    A    + +      +
Sbjct: 67  KEIMRKAGELGFLGVSVPEEYDGLGMDFVSTMLVCDYISGATGSVATAFGAHTGIGTLPI 126

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    K + P++ + E+                  LTE   G+D  +  ++     
Sbjct: 127 TLYGTEEQKKKYVPRLATGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSE 173

Query: 223 DG--IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG          W  ++   D FI+ A++  +  +  F+V + LE    NG+     + K
Sbjct: 174 DGSHYKITGQKMWISNAGFCDLFIVFARIEDDKNITGFIVEKDLE----NGISMGDEEKK 229

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G  S++T ++ F+ T      LLG+ N       +   +  +  A   +   R  L  A
Sbjct: 230 LGIHSSSTRQVFFNETTVPAENLLGERNGGFKIAMNSLNVGRIKLAAACLDAQRRVLTAA 289

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSE 388
           + YA  R      +     ++  +A++A+ I A  A S+R + + +       E  S  +
Sbjct: 290 VEYANVRVQFNTPISKFGAIRSKLAEMAMSIYADEAASYRASKNIEDRINLRKENGSSHQ 349

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   I K    +       E ++  GG G+  +  +   +R++    I 
Sbjct: 350 EAELKGVEEFAIECSILKVAVSEDIQRCTDEGIQIYGGMGFSADAPMESAWRDARIARIY 409

Query: 444 LGSGNAMVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
            G+     +  + +L +K       L    +               D   L  E+K + +
Sbjct: 410 EGTNEINRMLSVGMLIKKAMKGHVDLLGPAKAVADELTGIPSFETPDYTQLLAEEKAMLK 469

Query: 503 FLTEKIALASSAAALYRAGMN---------DIADVFLENRFLDNC 538
            L +K+ L  + +A  + G             AD+ +E    ++ 
Sbjct: 470 RL-KKVFLMVAGSAAQKYGEELDQHQQILLASADILIETYMAESA 513


>gi|295701069|ref|YP_003608962.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440282|gb|ADG19451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 594

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 172/474 (36%), Gaps = 61/474 (12%)

Query: 49  NFPSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAW 103
           +  S      + + L         +E AR        L+A     G R++  KV     +
Sbjct: 21  DAASWWRYVPDWQDLDSQTAQQVLEEAARFVEERIAPLNASADLEGCRFEAGKVTTPGGF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                  +  G      D         Q   +  A   ++A      LMSP +T  +   
Sbjct: 81  RESYAEFVEAGWPTLSLDAEHGGQGLPQ--LLDVALQEMLAGANHAWLMSPGLTHGATAC 138

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    + RV  +  PK+ S E+  T             + LTE + G+D+  I S+  + 
Sbjct: 139 LQTHGSERVKTELLPKVASGEWLST-------------MCLTEPQAGSDVGLIRSRAAQA 185

Query: 222 -SDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLEDGS--- 266
                Y + G K F+S    D       ++LA++         +  F+VP  LEDG    
Sbjct: 186 PGTDGYFIDGSKIFISGGAHDLTENIVHLVLARLPDAPSGTKGLSLFVVPEWLEDGDGGR 245

Query: 267 -PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             N +  + ++ K+G + + T  + F   FG+L+G+ +     +  M     L  A+  +
Sbjct: 246 SRNAVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLACLFVMMNAARLQVAMQGL 305

Query: 326 SGMRVSLAEAIHYARRRHV---------------SGGILIDQPVMKRAIADIALDIAAAT 370
                +   A  YA+ R                     +   P M+R + ++   +    
Sbjct: 306 GHAHTAWQRAHAYAQERAQMRAVSVPPGATVPAGQAAPIAFHPAMRRILMELRAIVEGER 365

Query: 371 ALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A+ +  A+  D A        R + A +A ++ P+ K +         ++A++  GG GY
Sbjct: 366 AIGYWTAHWLDIAAHHADAAEREQAAQFASLLTPVAKAFFTANGFDAASKALQVFGGYGY 425

Query: 425 IEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL 476
           I E  I +  R+S  + +  G+       L V  +L  G    + L   +  + 
Sbjct: 426 IHEYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGAGALDALLRHVRAEA 479


>gi|254238308|ref|ZP_04931631.1| hypothetical protein PACG_04441 [Pseudomonas aeruginosa C3719]
 gi|254244133|ref|ZP_04937455.1| hypothetical protein PA2G_04973 [Pseudomonas aeruginosa 2192]
 gi|126170239|gb|EAZ55750.1| hypothetical protein PACG_04441 [Pseudomonas aeruginosa C3719]
 gi|126197511|gb|EAZ61574.1| hypothetical protein PA2G_04973 [Pseudomonas aeruginosa 2192]
          Length = 386

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S ++V    +      WA  +F           + 
Sbjct: 47  GKALAAGFYAFNMPEEVGGGGLDYLSQALVERELS---KVSWALHVFVARPSKILMACTG 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  +I ++  +  D         +   +  +D
Sbjct: 104 EQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V   L D    G+  +R    + NR   T E+ F +    
Sbjct: 164 FAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAADRKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  ++   A   D+      EA  A       K +  +    V  E
Sbjct: 284 VSFKLADMATQIRAAELMALHTAWKMDQGTMTDGEAGMA-------KLFASETLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       V   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLR 382


>gi|182434788|ref|YP_001822507.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463304|dbj|BAG17824.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 380

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 133/390 (34%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A    P    +       D +    AW A    +   GL      + +         
Sbjct: 19  AFLAKEVLPHYEQW-----EQDGIVSRDAWLA----AGRAGLLGLAVPQEYGGGGSDDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +    A  +  A      +   +      +  + T    + W P   S E          
Sbjct: 70  YSAVLAEEFTRAGAPGLAIGLHNDIIGPYLTGLATDEQKRRWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG 251
                  + +TE   G+D+  I +  +   D  + L+G K F+S+  ++D  +++A+   
Sbjct: 120 ---TVTAIAMTEPGAGSDLQGIRTTAEDRGDH-WLLNGSKTFISNGIIADLVVVVAKTTA 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
             G   +  ++ +    G    R  +KIG ++  T EL F++        L       + 
Sbjct: 176 EGGAKGLSLIVVERGAEGFERGRNLDKIGQKAQDTAELFFNDVRVPKENLLGTRDGAFLH 235

Query: 311 DMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M  L    +  A+  ++     L     Y + R   G  L     ++  IA++A + A 
Sbjct: 236 LMTNLAQERMGIAVAGIAAAEHLLEITTQYVKEREAFGRPLSKLQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A         D       +     + A + K+W  ++   V    ++  GG GY+ E 
Sbjct: 296 TRAF-------LDRCIVDHSDGTLDAVHASMAKWWATELQKRVADRCLQLHGGYGYMSEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + +    +I  G+   M   +   L
Sbjct: 349 RVAKAFTDGRVQTIYGGTTEIMKEIIGRSL 378


>gi|94311587|ref|YP_584797.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355439|gb|ABF09528.1| Glutaryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 397

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 130/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 54  EIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K++ 
Sbjct: 114 EFGTEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVAG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++ G  G   +   + +    GL    +  K+G R+
Sbjct: 161 GYELTGAKMWITNSPIADVFVVWAKLMGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE   +  R  
Sbjct: 221 SITGEIVLDQVFVP---EENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 TLDRKQFGRPLAATQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGLQAF 396


>gi|209516716|ref|ZP_03265568.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209502833|gb|EEA02837.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 606

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 82/476 (17%), Positives = 162/476 (34%), Gaps = 65/476 (13%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +         +   +E+    N    +  A+   G+    V     + A        
Sbjct: 33  LTPDFTSAVIDAATTFHEEVLHPINQKADEAGAHFADGQ----VTTPAGFKAAWDAYREA 88

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G H                  +  + +            S    +A M+  +    V   
Sbjct: 89  GWHSLSLASELGGGGLPPVMSVPISEMRAATGHSFSMYGSFCSPAAYMLGTLAPDWVKTH 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
             PK+ S E+                + +TE + GTD+  IT++     DG + ++G+K 
Sbjct: 149 VVPKLASGEW-------------TATMSMTEPQAGTDLRQITTRAVPQEDGTWLITGNKI 195

Query: 234 FLSSPMSD-----AFIMLAQVEGRVG----------CFLVPRLLED------GSPNGLCY 272
           F+S    D       I+LA+     G           FLV +   D      G  NG+  
Sbjct: 196 FISGGDHDLTDNIVHIVLAKAVDEEGRVPQSLSAVNVFLVSKQNIDPQTGVLGDRNGVHV 255

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGD-LNVS----TGPVEDMKILIYLDSAIMSVSG 327
           + +++K+G  ++AT  L+F N  G+ +             P+  +     + +A+  +  
Sbjct: 256 RSIEHKMGIEASATCALDFENAVGYRIASTEGKGTTANMAPMFRLMNYARVGTAVSGIGY 315

Query: 328 MRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSF 374
             ++L  A+ YAR R  SG               +I  P ++R + + +     A A + 
Sbjct: 316 AEIALQNAVEYARERR-SGRAASSSRDTKTVADPIIAHPDVRRLLLESSAFAEGARAGAM 374

Query: 375 RLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + A    EA+      +R + A    ++ P+ K +             +  GG GY+++ 
Sbjct: 375 KAAVLQSEARYLSERAARQKAADILDLLTPVMKAFFTDRGFETTVACQQVFGGHGYVKDY 434

Query: 429 SIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
            I R  R S    I  G+       L    ++     ++    + + + +    + 
Sbjct: 435 GIERLVRNSRITQIYEGANGIHASDLASRKIMAHDRRMWNHFATAISEFIARHSQD 490


>gi|148554517|ref|YP_001262099.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499707|gb|ABQ67961.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 383

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 78/363 (21%), Positives = 137/363 (37%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
            A  R++   GL C+     +       AH+   +     A L AG  +  SV+    A 
Sbjct: 41  RAAWRKAGAAGLLCASIPEEYGGGGGSWAHEAVISCEISRAGLGAGFGLGVSVSCSIVAH 100

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +      W P + + E             +   + +TE   G+D+ AI +Q + 
Sbjct: 101 YILSYGSEAQKARWLPALATGE-------------IIGAIAMTEPGAGSDLKAIRTQARP 147

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKI 279
              G        +  +   +D  +++A+ +   G   +  L +E  +  G    R  +K+
Sbjct: 148 CEGGYRITGQKTFITNGQTADLILVVAKTDMAAGAKGMSLLAVEAANAEGFVRGRNLDKL 207

Query: 280 GNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G  +  T EL F + F      L G+   +   + +  I   L   + + + M  ++   
Sbjct: 208 GLHAQDTSELFFEDVFVPEENLLGGEPGRAFAQLMEQLIWERLTVTLNAATDMERAIEMT 267

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YAR R   G  L+D    +  +A+       A AL       FD+   R  E      
Sbjct: 268 AAYARERSAFGQRLMDFQNTQFKLAECKASAVVARAL-------FDDMLQRFLEGTLDAA 320

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A   KYW  +    V  E ++  GG GY+ E  IAR + ++ A+ I  G+ + M   + 
Sbjct: 321 TAASAKYWASEALGKVADECLQLFGGYGYMTEYPIARLWADARASRIYAGASDIMKTIIA 380

Query: 456 NLL 458
             L
Sbjct: 381 RTL 383


>gi|24214630|ref|NP_712111.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45657829|ref|YP_001915.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24195607|gb|AAN49129.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601069|gb|AAS70552.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 376

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 128/373 (34%), Gaps = 29/373 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W+KV   P    + +++  +GL C      +        + +             
Sbjct: 28  PNHESWEKVGVVP--KEIWKKAGANGLLCPDVPAEYGGAGADFLYNVIVIEESSRVGNSG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +   +   A  +         K W P   +                 + + +TE   G
Sbjct: 86  FFISLHNDVIAPYITAYANEEQKKRWLPGCTTG-------------DSILAVAMTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   + SD  Y ++G K F+S+      I+ A             L+ +    
Sbjct: 133 SDLKNIRTSAIEKSDH-YVVNGQKTFISNGQLANLIITAVKHDNGTM---SLLMVEEGMK 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   KIG ++  T EL +++       L+G        +        L  +I +V
Sbjct: 189 GFERGRRLEKIGLKAQDTSELYYNDVIVPKENLIGKQGQGFRYLMQKLATERLVLSIAAV 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
               +     + Y + R   G  +     +K  +A++A ++        ++       +S
Sbjct: 249 EATALVQRITLQYIKERQAFGKKIGTFQNIKFKMAEMATELEMCRTFVDKITLETIAGRS 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + EA+ A+        +  +M      E ++  GG GY+ E  IAR Y ++   +I  G
Sbjct: 309 NTAEASMAKW-------YSTEMQKRHTDECLQFFGGYGYMMEYPIARAYLDARIQTIYAG 361

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   L
Sbjct: 362 TTEIMKEIIGRSL 374


>gi|118467521|ref|YP_884942.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118168808|gb|ABK69704.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 403

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 131/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+       ++ EP        +           
Sbjct: 28  PAAAEWDEREETP--WPVIQEAAKVGLYSPELFAQQAAEPT---GIGMLTVFEELFWGDA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +  +A+ +A   TP     W P++F    +P                 +E  
Sbjct: 83  GIALSILGTGLAAAALAGNGTPEQLGQWLPEMFGTADEP----------KLGAFCSSEPD 132

Query: 207 GGTDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+ AI ++ +               W  +  +++  I++A V   +G       +  
Sbjct: 133 AGSDVGAIRTRARFDEATREWVLNGTKTWATNGGIANVHIVVASVYPELGSRGQATFIVP 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------------STGPV 309
              +GL   +   K G R++ T E+   N        L                 S G  
Sbjct: 193 PGTHGLVQGQKFKKHGIRASHTAEVVLDNVRLPEDMILGGREKFEERIARVKSGASAGGH 252

Query: 310 EDMKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I 
Sbjct: 253 AAMKTFERTRPTVGAMAVGVARAAYEYALDYACQREQFGRKIGEFQAVAFKLADMKSRID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        +              + K    + A  V  EA++ +GG+GY  +
Sbjct: 313 AARLLVWRAGWMARNNQQFDSA------EGSMAKLVASETAVYVTDEAIQILGGNGYTRD 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L +   L
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|254284088|ref|ZP_04959056.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219680291|gb|EED36640.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 395

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 127/358 (35%), Gaps = 34/358 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + R     GL  S  D    P V   ++ + A  +  +       L   S      +  
Sbjct: 58  EIFREMGELGLLGSTIDGYGCPGVDYVSYGLVAREVERVDSGYRSMLSVQSSLVMYPIHA 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + + PK+ + E+                 GLTE   G+D   + ++ + +  G
Sbjct: 118 FGSEAQREKYLPKLATGEW-------------IGCFGLTEPDYGSDPGGMVTRARTVEGG 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D F++ A+ +  V    +   + +    GL   +++ K+  R++
Sbjct: 165 YSLTGAKMWISNSPIADVFVVWAKTDDGV----IRGFVLEKGMPGLSAPKIEGKLSLRAS 220

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYAR--- 340
            T E+   +         +     VE +K     L++A   ++   +  AE   +A    
Sbjct: 221 ITGEIVMEDVVV----GEDAMLPGVEGLKGPFSCLNNARYGIAWGALGAAETCWHAARDY 276

Query: 341 --RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R      L    +++  +AD+  +I+       R     D  +        A  +  
Sbjct: 277 TMERKQFNRPLAANQLIQLKLADMQTEISLGLQGCHRAGVLMDAGQ-------IAPELIS 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + K   C  +  V  +A + +GG+G  +E  + RH       +   G+ +   L +  
Sbjct: 330 LIKRNSCGKSLEVARKARDMLGGNGISDEYPVMRHMMNLEVVNTYEGTHDIHALILGR 387


>gi|187927802|ref|YP_001898289.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187724692|gb|ACD25857.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 397

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 129/364 (35%), Gaps = 30/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             AR           +MS  S      +    
Sbjct: 57  REMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFG 116

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ + E+                 GLTE   G+D A++ ++ +K+  G  
Sbjct: 117 SEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPASMITRARKVDGGYS 163

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A++    G   +   + +    GL    +  K+G R++ T
Sbjct: 164 LSGAKMWITNSPIADVFVVWAKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSIT 223

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+     F     + N+  G          L+SA   ++   +  AEA  +  R     
Sbjct: 224 GEIVLDEVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLD 280

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K
Sbjct: 281 RKQFGRPLAANQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITSIMK 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   + G
Sbjct: 334 RNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRAQTG 392

Query: 462 TNLF 465
              F
Sbjct: 393 IQAF 396


>gi|89901050|ref|YP_523521.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345787|gb|ABD69990.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 593

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 94/494 (19%), Positives = 190/494 (38%), Gaps = 58/494 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVE 98
            +  L            E           QE A+        L+      P   +   V 
Sbjct: 13  AMQELAGLSSVSALPGFEDYDLDTAQAVMQESAKFCAGVVAPLNVGGDKDPSSFKDGAVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P +     +    G    I    F      +   I    + ++        + P +T 
Sbjct: 73  TAPGFKEAYAQFTQGGWQGVIHPTEFGGQGFPK--LIATPCIEMLHAASLSFALCPMLTD 130

Query: 159 ASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            ++ AL    +  + + +  K+ S ++  T             + LTE + G+D+AA+ S
Sbjct: 131 GAIEALLVAGSDELKRKFVGKLISGQWTGT-------------MNLTEPQAGSDLAAVRS 177

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED- 264
             Q  +DG Y + G K F++    D       ++LA+V G       +  FLVP+L+   
Sbjct: 178 TAQPQADGSYKVFGTKIFITYGEHDMAENIIHLVLARVPGAPEGVKGISLFLVPKLMVGD 237

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
               G+ N +    +++K+G +++ T  L+F +     G+++G  N     +  M     
Sbjct: 238 DGALGARNDVACVSIEHKLGIKASPTAVLQFGDQGGAVGYVVGQENRGLEYMFIMMNAAR 297

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAA 369
               +  ++    +  +A+ +A  R  S  +        +I+ P +KR +  +   +   
Sbjct: 298 FAVGMQGIAVADRAYQKAVRFAHDRAQSRDLAGSDGPVSIINHPDVKRMLLTMRAHVEGT 357

Query: 370 TALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            AL++  A + D A   ++E       A    + P+ K +  +M+  + +  ++  GG G
Sbjct: 358 RALAYVAAAASDAAHHAADELTRKNNQAVYEYLVPVVKGFATEMSVEMTSLGVQVHGGMG 417

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNL--LEKGTNLFEQLFSTL---EQDLGS 478
           YIEE   A+H+R++   +I  G+      D++    L     + + L + +   EQDL +
Sbjct: 418 YIEETGAAQHFRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALCAQIALTEQDLSA 477

Query: 479 SGKKVITILRDSIS 492
            G      + +++ 
Sbjct: 478 RGNDDCMAMLNALK 491


>gi|167035986|ref|YP_001671217.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166862474|gb|ABZ00882.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 600

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 95/502 (18%), Positives = 177/502 (35%), Gaps = 77/502 (15%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+        E   +V+  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPR--YVDGRAELITEVK--PAVDAFL----EAGFLNTNRDFEVGGMQLPSLVS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          ++ +A+++    T    + +   +    Y  T        
Sbjct: 110 QACFAHFQAANAGTTAYPFLTMGAANLIESFGTEEQKRLFLQPMIEGRYFGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ +A I ++ +  +DG Y L G+K F+S    +       ++LA++
Sbjct: 162 -----MALTEPHAGSSLADIRTRAEPAADGSYRLKGNKIFISGGDHELSENIVHMVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+   +     G  NG+    L +K+G R   +  L F +     
Sbjct: 217 PDAPPGVKGISLFIVPKFNVNPDGSRGPRNGVLLAGLFHKMGWRGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR+R   G         
Sbjct: 277 GYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQ-GRLPDNKDPH 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMA 397
                +I+   +KR +      +  A  L    A  FD+  + SEE+          ++ 
Sbjct: 336 SQAVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTASEESTRQQTQELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLG- 454

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSA- 514
                         L Q+ G+  K++I ++ ++         L   R   E++     + 
Sbjct: 455 ------------RKLAQNNGAGLKQLIRLIANTGERASHHPNLDPLRQPLEQLVNRLQSV 502

Query: 515 --AALYRAGMNDIADVFLENRF 534
             A L       +A     +  
Sbjct: 503 TLALLGDLAQGKVAGALANSAL 524


>gi|220929048|ref|YP_002505957.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
 gi|219999376|gb|ACL75977.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum
           H10]
          Length = 400

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 144/386 (37%), Gaps = 34/386 (8%)

Query: 89  PGGERWDKVEFHPA---WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P    +DK E       W +++ +++  GL  +   + F          +          
Sbjct: 26  PFAAEYDKKENPKDCIPW-SIIEKAMGLGLGSAAVPKEFGGSGLSSLEILTIIEELARGD 84

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               + +  ++T A ++    T      W  KI +           Q     +G  L+E 
Sbjct: 85  AGFAYTLLSTITGAQLITKFGTDEQKNQWLTKIAN----------DQTKRFLMGFALSEP 134

Query: 206 RGGTDI------AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC--F 256
           + G+D       A + +  +   DG Y ++G K F+++  ++  +++ A+ +   G    
Sbjct: 135 QTGSDNMSPNPNAGMLTTAELT-DGQYIINGTKSFITNAGIAGLYLVWARTDKSKGAPQG 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
            +   L      GL   ++++K+GNR +   EL F N       LLG   +       M 
Sbjct: 194 GLSVFLVPADAPGLKVGKIEDKMGNRLSQQGELIFENCIIPASNLLGKEGMGLPVCLAMI 253

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
              +     +     + +   +  YA+ R   G  +I+Q  +   +A+I + I ++  L 
Sbjct: 254 ENRFSTVGAIGTGIAQAAFNISYKYAKERVQGGAPIINQQAISHKLANILIAIESSRLLY 313

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D             ++  ++K    + A     E ++ +G  GY  E    + 
Sbjct: 314 QKAAWHLDNMIPG-------MVIGSMSKVAGSEAAIMASNETIQILGCYGYSREYPAEKL 366

Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459
            R+S A SI   +      +++ +L+
Sbjct: 367 LRDSKALSICESANEVQRSNIIMMLQ 392


>gi|239503452|ref|ZP_04662762.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
          Length = 379

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 137/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  ++W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYKQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + +    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGSEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+   +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTGPQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+   R   KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGRSLQKIGLHAQDTAELFFDDVCVPATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++     Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGAILGAIELTKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|26991626|ref|NP_747051.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24986719|gb|AAN70515.1|AE016693_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 600

 Score =  234 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/522 (18%), Positives = 178/522 (34%), Gaps = 74/522 (14%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            + E  P     +   +  G   +  D     +       
Sbjct: 58  RKADENEPRYVD--------GRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          ++ +A+++    +    + +   +    Y  T        
Sbjct: 110 QACIAHFQAANAGTTAYPFLTMGAANLIESFGSDEQKRLFLQPMIDGRYFGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ- 248
                + LTE   G+ +A I ++ +   DG Y L G+K F+S    +       ++LA+ 
Sbjct: 162 -----MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKL 216

Query: 249 VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
            +   G   +   +            G  N +    L +K+G R   +  L F +     
Sbjct: 217 PDAPPGVKGISLFIVPKYHVNPNGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR+R   G         
Sbjct: 277 GYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQ-GRLPDNKDPH 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I+   +KR +      +  A  L    A  FD+  +  +E A         ++ 
Sbjct: 336 SPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAPDENARKPAQDLLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKI----- 508
            L +      +QL   +      +S    +  LR  +  L    +G+   L   +     
Sbjct: 456 KLAQHNGAGLKQLIRLIAATCERASHHPNLDPLRQPLEQLANRLQGVTLALLGDLAQGKV 515

Query: 509 --ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
             ALA+SA  L   G   I   +LE       H+   ML G 
Sbjct: 516 AGALANSALYLKAFGHCVIGWRWLE----QAVHAELGMLKGT 553


>gi|195352258|ref|XP_002042630.1| GM14915 [Drosophila sechellia]
 gi|194124514|gb|EDW46557.1| GM14915 [Drosophila sechellia]
          Length = 398

 Score =  234 bits (596), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 109/306 (35%), Gaps = 46/306 (15%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++           + PK+                  A    LTE   G+D  ++ +  +K
Sbjct: 129 LMMKFGNAEQKAKYLPKL--------------AQEYAGSFALTEPGAGSDAFSLKTVAKK 174

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +S ++  F++ A  +   G   +   + D    GL   + ++K+G
Sbjct: 175 DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLG 234

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE----- 334
            R++ T +L F N       + N+        K    +L+   + ++   V LA+     
Sbjct: 235 IRASGTCQLTFDNVRVP---EENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDA 291

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            I Y   R   G  + +   M+  IA +A +I AA  +++  A   ++     +EAA A 
Sbjct: 292 TIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA- 350

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                              + +   GG    E     ++YR+    +I  G+ N  +  +
Sbjct: 351 -------------------QVLRLRGGP---EGGDQEKYYRDVKIGAIYEGTTNMQLSTI 388

Query: 455 LNLLEK 460
              ++K
Sbjct: 389 AKCIKK 394


>gi|126730544|ref|ZP_01746355.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126709277|gb|EBA08332.1| acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 532

 Score =  234 bits (596), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 162/436 (37%), Gaps = 39/436 (8%)

Query: 82  PQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P        G R +  +V     +    R+   DG   S        +    A    AA 
Sbjct: 47  PMAARADETGCRVEQGRVRTPEGYGDAFRQMGADGWIASDLGSDLGGMDMPLA-LHAAAS 105

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           L +        ++  S  +A+     T P +  +W PK+ S E+             A  
Sbjct: 106 LPMEGAALPFMMLLGSTRAAAHCLAATAPDLAAEWCPKLASGEW-------------AAT 152

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----- 249
           + ++E   G+D+  I ++     DG    SG K ++S    D       + LA+      
Sbjct: 153 ICISEPDAGSDVGRIRTKAMPAGDGWTV-SGTKCWISFGDHDMAERIGHLCLARTGAPED 211

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
               +  FLV   L+DG+ NG+  +R++ K+G   + T  L F      L+G        
Sbjct: 212 GTRGLSLFLVADTLDDGTRNGIFVERIEEKLGLHGSPTCVLRFETAEASLIGTPGRGLPA 271

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMKRAIADI 362
           + +M  L+ L   +            A  YA  R   G        +   P ++R +  +
Sbjct: 272 LFNMIELMRLQVGVQGAGVAATCATLARDYADDRRQGGRPDAAPVAIASHPDVRRQLWQM 331

Query: 363 ALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
                 ATAL    A +  D     +E AA +  + P+ K +  ++  A    A++ +GG
Sbjct: 332 EARALIATALVVETAVTLGDAHAGNTEAAALSAFLLPLAKTFGGELGQANADAAIQVLGG 391

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS 479
           +GY  E    RH+R+    ++  G+      DVL   LL+ G  +   L + L  D GS 
Sbjct: 392 AGYTREWPAERHFRDVRITTVYEGTTGMQAQDVLFRRLLKDGPAIRAALLARL--DGGSV 449

Query: 480 GKKVITILRDSISLCK 495
              ++  L   +    
Sbjct: 450 FPTLLARLDTLVERLS 465


>gi|254283480|ref|ZP_04958448.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
 gi|219679683|gb|EED36032.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B]
          Length = 395

 Score =  234 bits (596), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 129/360 (35%), Gaps = 38/360 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + R     GL  S  D    P V   ++ + A  +  +       L   S      +  
Sbjct: 58  EIFREMGEMGLLGSTIDGYGCPGVDYISYGLVAREVERVDSGYRSMLSVQSSLVMYPIYA 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PK+ + E+                 GLTE   G+D   + ++ + +  G
Sbjct: 118 FGTEAQREKYLPKLATGEW-------------IGCFGLTEPDYGSDPGGMVTRARTVDGG 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D F++ A+ +  V    +   + +    GL   +++ K+  R++
Sbjct: 165 YSLSGAKMWISNSPIADVFVVWAKTDDGV----IRGFVLEKGMPGLSAPKIEGKLSLRAS 220

Query: 285 ATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR- 340
            T E+   +       LL D+    GP         L++A   ++   +  AE   +A  
Sbjct: 221 ITGEIVMEDVVVGEDALLPDVEGLKGP------FSCLNNARYGIAWGALGAAETCWHAAR 274

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    +++  +AD+  +I+ A     R     D  +        A  +
Sbjct: 275 DYTMERKQFNRPLAANQLVQLKLADMQTEISLALQGCHRAGVLMDAGQ-------IAPEL 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  +  V  +A + +GG+G  +E  + RH       +   G+ +   L +  
Sbjct: 328 ISLIKRNSCGKSLDVARKARDMLGGNGISDEYPVMRHMMNLEVVNTYEGTHDIHALILGR 387


>gi|111222561|ref|YP_713355.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111150093|emb|CAJ61788.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 393

 Score =  234 bits (596), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 72/358 (20%), Positives = 131/358 (36%), Gaps = 26/358 (7%)

Query: 109 RSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R+   GL        +    V    +    A  +  A +    +   +      +  +TT
Sbjct: 57  RAGEVGLLGPAVPEQYGGAGVDDPRYGAVVAEEFASAGIGGFAIQLHNDLIGPYLLELTT 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 W P     E             +   + +TE   G+D+  + +   +  D  Y 
Sbjct: 117 DEQKARWLPGYVRGE-------------LITAIAMTEPVAGSDLRGMRTTAVRDGDH-YV 162

Query: 228 LSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++G K F+S+ +    ++L A+     G   +  ++ +    G    R  +K+G RS  T
Sbjct: 163 VNGSKTFISNGILADLVVLCAKTTRADGEQGISLIVVERDTPGFERGRRLDKVGARSQDT 222

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            EL F++       LLG+ N     +        L  AI S+  +  +L     Y R R 
Sbjct: 223 AELFFTDARVPVANLLGEENEGLHYLMRNLAKERLSIAISSIQNVFRALELTTAYVRERR 282

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +      +  +AD+      A +       +    +    EAA A++ A      
Sbjct: 283 AFGKPIGSFQNTRFVLADLQARAWMARSFVDACLAALVVGELTGVEAAAAKLCA------ 336

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             ++  A +   ++  GG G++ E  IAR YR+S  + IL GS   M   +   ++ G
Sbjct: 337 -TELEDAAVDAGVQLHGGYGWMNEYPIARMYRDSRISRILGGSNEIMKEIIGRSMQLG 393


>gi|116694531|ref|YP_728742.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529030|emb|CAJ95377.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 385

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 126/378 (33%), Gaps = 33/378 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
           GP GERW +         + R++   G      D  +     +   ++            
Sbjct: 26  GPHGERWREQGCVD--REVFRKAGEQGYLLMWADEKYGGAGVEDFRYEQILIEENARHGD 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S   A  +  +      +   P                +      + +TE +
Sbjct: 84  SGFFGTLHSRLVAPYIGRIGNEEQRQRLLP-------------AAARGESIFAIAMTEPQ 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A + ++ +   D         +  +  ++D  +++A+ +       +   + +  
Sbjct: 131 AGSDLAGMRTRAEDHGDHWVLNGAKTYISNGQLADYVVVVARTDPERSH-GLGLFIVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G    R   K+G  S  T EL F N         NV   P +  + L        L  
Sbjct: 190 MPGFERGRKLRKMGLHSQDTSELFFDNVKVP---KANVLGEPGQGFRYLTRHLAEERLIG 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   ++  +V+    + Y + R   G  +      +  +A++   + A      +     
Sbjct: 247 ACGYMASAQVAFDLTLDYVKERKAFGRAIGTFQNSRFKLAELRAQLDALQTFVDQCVLQH 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +      E AA A+++         ++   ++ E ++  GG+GY+EE  I R Y ++  +
Sbjct: 307 NAGTLTVETAASAKLLT-------SELQGRMVDEGVQLHGGAGYMEEYRICRMYTDARIS 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS   M   +   L
Sbjct: 360 RIYAGSSEIMKEIIGRSL 377


>gi|111019289|ref|YP_702261.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818819|gb|ABG94103.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 385

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 132/376 (35%), Gaps = 31/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
             W+     P      RR    G+        F     K              A +  G 
Sbjct: 30  HEWEGEGHPP--RDFYRRLGELGVLGIQVPEEFGGGGEKSFKFAAVVGEETAAAGVTFGS 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +         + W P   S +                 + +TE   G+D
Sbjct: 88  YSVHTNLILPYLLEYANDEQKQRWLPGFASGDIM-------------FAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDG 265
           +A I +  +   DG  Y L+G K F++   ++D  +++ +            +  L+ D 
Sbjct: 135 LANIATSAKLSDDGSHYVLNGAKTFITGGALADRILVVCRTAPSTPEDRRAGLTILVVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    R   KIG +++ T EL F++    +   LGD       +        L  A+
Sbjct: 195 TSEGFAVGRKIEKIGLKASDTAELSFTDVTVPVADRLGDEGAGFSYLTHNLAQERLSIAL 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +    +L  AI Y + R V G  +      K  +A+ A ++ A   ++ R     D 
Sbjct: 255 GGSATAAAALQHAIAYVKERKVFGKPVAAFQNTKFVLAECATEVEAIQLMADRALELHDA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++  + I
Sbjct: 315 GELTVPDAAKA-------KLFCTEAAGRVIDKCLQLHGGYGYILEYPIARLYADTRVSRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 368 YGGTSEVMKTIIAKDL 383


>gi|332304753|ref|YP_004432604.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172082|gb|AEE21336.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 374

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 129/388 (33%), Gaps = 35/388 (9%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAH 133
              +     R+ + E  P  H   ++ I            GL CS     F        H
Sbjct: 9   HEMFRQMARRFIENEITPHLHDWEKQGIVPKDIWLKAGEVGLLCSCVPEEFGGAGGDYGH 68

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                     A   A    + S   A+ +         + W  K+ + E           
Sbjct: 69  SAIMIEELARANATAIGFTTHSEIVANYLVAYGNTEQKEKWLSKMVTGE----------- 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +   + ++E   G+D+ ++    ++  D  Y +SG K F+++  +   ++ A      
Sbjct: 118 --IIGVIAMSEPGVGSDLRSMRMSARREGDE-YVISGQKTFITNGGNADLVVAACKLDPK 174

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVE 310
              L   +  +    G    RL +KIG +   T EL F +    +   LG+ N     + 
Sbjct: 175 SRDL-TLICVEKDRQGFTKGRLLDKIGLKGQDTAELFFDDVRVPVANRLGEENEGFNYLF 233

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  AI +   +   L E I Y R R   G  + D    +  +A++        
Sbjct: 234 HQLAWERLIIAIRAAQCIETLLEETIEYTRDRRAFGKAIFDYQNTRFKLAEVKAKATMLR 293

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A               +EEAA         K    ++   ++ E ++  GG G++ E  I
Sbjct: 294 AFVDNCIAKVLTDDLSAEEAAM-------VKLVGSELQGELLDELLQLHGGYGFMTEYKI 346

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           +R + ++    I  G+   M   +   L
Sbjct: 347 SRAWVDARVARIYGGTSEIMKEIIARSL 374


>gi|119715065|ref|YP_922030.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535726|gb|ABL80343.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 381

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             L   +   G        S+        ++  A  +  +A++      S S+     A 
Sbjct: 40  RELWLEAGRQGYLGLCVPESYGGADADD-YRFNAVLIEELARVNMALASSLSIHFDVVAP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  +TTP   + W P   + E             +   +G+TE   G+D+AA+ +  + 
Sbjct: 99  YLVELTTPEQRQRWLPGFVTGE-------------LVTAIGMTEPSVGSDLAALRTTAEP 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            S+G        +  +   +D  ++ A+         +     +    G    R  +K+G
Sbjct: 146 CSEGWRLNGSKTFITNGSSADLVVVAARTTPGSRSRGISLFAVEADRRGFSRGRKLDKVG 205

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                T EL F +       L+G L+     +        + +A  +++     L E + 
Sbjct: 206 QPEADTAELFFEDLVLPAENLIGTLDRGFQHMMGGLTQERIGAATSNIAHAAQILDETLG 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  +      K  +A++A  +        +   +    +    +AA A+   
Sbjct: 266 YVRERRAFGSPIGSFQHNKFLLAELATRVEVTQTFVHQCVLAHSRGELTPVDAAKAKW-- 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W   +   V+   ++  GG G++ E+ +AR ++++    I  GS   M   +   
Sbjct: 324 -----WSADVQNDVVDHCVQLHGGYGFMNEQRVARAWQDARVTKIWAGSNEIMKELIGRD 378

Query: 458 L 458
           L
Sbjct: 379 L 379


>gi|251796776|ref|YP_003011507.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247544402|gb|ACT01421.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 374

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 129/372 (34%), Gaps = 31/372 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R +  E  PA   ++R             + +          I A           G ++
Sbjct: 30  RMESEERFPA--EIIRSMAERDWMGIPVSKHWGGAGSDFISYIIAINEVSRVSAAVGVIL 87

Query: 153 SPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S   +  ++  L   T    + +  K+ S E+                  LTE   G+D 
Sbjct: 88  SVHTSVCTLPILNYGTEEQREQFVRKLASGEW-------------IGAFALTEPHAGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AAI +  ++  D         +  ++  +  +++ A  +G      +   +  G   GL 
Sbjct: 135 AAIRTSAERKGDHYELNGSKLFITNAGAAGVYVVFAVTDGTKRAGGITAFIVPGDMEGLH 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             + + K+G   + T EL F          L          K    LD   + ++   + 
Sbjct: 195 IGKPERKMGLHGSNTCELHFEQLRIPAEYRLGREGEGFAIAKG--SLDGGRIGIAAQALG 252

Query: 332 LAEA-IHYARRRHVSGGILIDQPVMKR--AIADIALDIAAATALSFRLANSFDEAKSRSE 388
           +AEA I   R R   G      P   R   +A++    AAA  L +R A+   E +  ++
Sbjct: 253 IAEASIELLRDR--FGPPKG-YPYTSRDTELAELLARTAAARLLVYRAASLRQEGRPCTK 309

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E++ A++       +    A AV   A+  +G  G  +E    R +R++    I  G+  
Sbjct: 310 ESSMAKM-------FASDTAVAVTGAAVRLLGEEGLSKEHPAERLFRDAKVTQIYEGTNE 362

Query: 449 AMVLDVLNLLEK 460
              L +   L K
Sbjct: 363 IHRLVISGGLMK 374


>gi|193076815|gb|ABO11538.2| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 379

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  E+W+     P    L  R   +G  C      +        + +   +    A    
Sbjct: 24  PYYEQWEHDGLIP--RDLWLRLGENGFLCVDVPEEYGGYGAPVHYSLMLVQETAQAGFAS 81

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  +   +   +  +  + T    + W PK+ + E             V   + +TE  
Sbjct: 82  LAVAIGGQNELVSPYLQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEAN 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDG 265
            G+D+ AI +Q    +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D 
Sbjct: 129 AGSDLQAIRTQAILENDH-YRINGSKTFISNGLHADLIVLVAKTDSQAKAKGISILLVDA 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
           + +G+       KIG  +  T EL F +        LG+       +        L  ++
Sbjct: 188 ALDGVKKGPSLQKIGLHAQDTAELFFDDVCVLATQRLGEEGQGFAYLMQELPRERLSISM 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M++  +  ++  +  Y   R   G  L      +  +A+  +   AA A   + A  + +
Sbjct: 248 MALGAILGAIELSKDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQ 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +        +       K +   +   VI + ++  GG GY++E  I+R + ++    I
Sbjct: 308 HQ-------LSVTQVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 361 YGGTNEIMKEIVAREL 376


>gi|258563198|ref|XP_002582344.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237907851|gb|EEP82252.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 332

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 126/364 (34%), Gaps = 47/364 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
           A++ +    GL        +          I               ++    T   + + 
Sbjct: 4   AVVEQLFEQGLMGIEIPEEYGGAGMNFTSAIVGIEELARVDPSVSVMVDVHNTLVNTAIL 63

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  + K W P++               T+      L+E   G+D  A+ ++  K   
Sbjct: 64  KHGSAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKATKTES 109

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +S  +  FI+ A ++   G   +   L               K+G R+
Sbjct: 110 GYKINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFL---------------KLGIRA 154

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAEAIHYAR-- 340
           ++T  L F +     +   N+     +  K  I L +   + ++     LA         
Sbjct: 155 SSTCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAG 211

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R   G ++     M+  +A    DIAAA AL +  A   +  +    +AA A   
Sbjct: 212 YIWNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAARKKEAGQDFVMDAAMA--- 268

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  ++A  V + A+E +GG G++ E    + +R+S   +I  G+ N  +  +  
Sbjct: 269 ----KLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAK 324

Query: 457 LLEK 460
            L+K
Sbjct: 325 SLQK 328


>gi|150376805|ref|YP_001313401.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150031352|gb|ABR63468.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 395

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 145/412 (35%), Gaps = 49/412 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A+       +L        R  +    PA    +      GL       
Sbjct: 23  ERMIRDTARAYAQE------KLQPRVIEAYR--EETTDPAIFREMG---DLGLLGVTVPD 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           S+  V     A+ + A  +  +       +   S      +    +    + + PK+ S 
Sbjct: 72  SYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVVYPIYAYGSEDQKRKYLPKLISG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D A + ++  +   G   +    W  ++P++D
Sbjct: 132 EW-------------IGCFGLTEPDAGSDPAGMKTRAIRTEGGYRLIGSKMWISNAPLAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
            F++ A+ E       +   + +    GL   ++  K+  R++ T E+   N       L
Sbjct: 179 VFVVWAKSEAHDNA--IRGFVLEKGTKGLSAPKIAGKLSLRASITGEIVLDNVEVGEEAL 236

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
           L D+    GP         L+ A   +S   +  AE   +A R     R      L    
Sbjct: 237 LPDVEGLKGP------FGCLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + ++ +AD+  +IA     S R+    DE +        A  M  I K   C  A  +  
Sbjct: 291 LFQKKLADMQTEIALGLQGSLRVGRLMDEGR-------MAPEMISIVKRNNCGKALDIAR 343

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +A +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 344 QARDMHGGNGISEEYQVMRHMLNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|288919436|ref|ZP_06413768.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349130|gb|EFC83375.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 387

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 127/376 (33%), Gaps = 29/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ERW        W  L + + + G+        +     K           L     +
Sbjct: 33  PNAERWQAGGKVDRW--LFQEAGNAGVLGFNIPEEYGGGGTKDFRFNAIVAEELGRNPVS 90

Query: 149 GHLMSPSVTSASMVALM---TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             +    +++  ++      T       W P I              K  + + + +TE 
Sbjct: 91  DGMAGVGLSNDIVIPYFIDLTNDEQKARWLPGI-------------AKGDLIVAVAMTEP 137

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A I +   +  D  Y ++G K F+S+  +   ++ A          +  ++ + 
Sbjct: 138 GTGSDLAGIRTSAVRDGDH-YVVNGSKTFISNGQNADLVVTAVRTSEDPHKGLSLMVIEA 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
              G    R   KIG  +  T EL FS+    +   L    +G +  MK L    L  A 
Sbjct: 197 DSPGFGRGRNLEKIGLHAQDTSELFFSDVRVPVENLLGAEGSGFLGLMKNLPQERLSIAA 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +++     L   + Y   R   G  +      +  +A++      +           D+
Sbjct: 257 GAIAATEGVLERTLSYVTERKAFGKPVGAFQNTRFQLAEMVTAARVSRVY-------IDD 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +R          A   K+W  +    ++   ++  GG GY+ E  IA+ Y +S   +I
Sbjct: 310 LITRHTAGEVTAAEAAAAKFWTTEQLVDIVGRCLQLHGGYGYMLEYRIAQDYLDSRITTI 369

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   V   L
Sbjct: 370 YGGTTEIMKEIVGRDL 385


>gi|72161350|ref|YP_289007.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915082|gb|AAZ54984.1| butyryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 384

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 126/363 (34%), Gaps = 29/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
           + ++      GL    +      +         A           A  L +     A  +
Sbjct: 39  YEIVAAMGRMGLFGLPFPEDVGGMGGDYLALCLALEELARVDSSVAITLEAAVSLGAMPI 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP     W P++ S E                  GLTE  GG+D  A  +  +  +
Sbjct: 99  YRFGTPEQQATWLPRLCSGE-------------ALGAFGLTEPEGGSDAGATRTTARLDA 145

Query: 223 DGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNK 278
            G + ++G K F+++  +D      + A    R  G   +  ++      G    +  +K
Sbjct: 146 -GEWVINGTKSFITNSGTDITALVTVTAVTGQRPDGRPEISAIIVPAGTPGFTIGQRYSK 204

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G  ++ T EL F++        L     G  + + IL    +  A ++V   +  + E 
Sbjct: 205 VGWCASDTNELVFTDCRVPEANLLGERGRGYAQFLSILDEGRIAIAALAVGLAQGCVDEC 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y  +R   G  +     ++  IAD+A  +  A    +  A      +   +EAA    
Sbjct: 265 LRYVGQRVAFGREIGRYQAIQFKIADMAARVHTARLAYYDAAARLLAGQPFKKEAA---- 320

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              I K      A     +A +  GG G++ E  + R YR++    I  G+     + + 
Sbjct: 321 ---IAKLVASHAAMDNARDATQIFGGYGFMNEYPVGRFYRDAKILEIGEGTSEIQRMVIA 377

Query: 456 NLL 458
             L
Sbjct: 378 REL 380


>gi|239931124|ref|ZP_04688077.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291439493|ref|ZP_06578883.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291342388|gb|EFE69344.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 385

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      A+       S      +   
Sbjct: 40  RDFYYKLGELGIFGISVPEEFGGAGLDT-HKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  + E                 + +TE   G+D+A + +  +  
Sbjct: 99  IKMLATDEQKKRYLPKFVTGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDRRHGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAKQYVQERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|284993040|ref|YP_003411594.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284066285|gb|ADB77223.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 597

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 102/562 (18%), Positives = 187/562 (33%), Gaps = 88/562 (15%)

Query: 38  SSDSLLVALIA--------NFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHA 86
             D LL   +          +     +  + + +       +  A   R A+ N P++  
Sbjct: 11  DLDFLLHEWLDVEDLVKRPRYAEHSRETFDAVLDLAEQIATEHFAPHNRKADENEPRMVD 70

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
                    K    P     L   +  GL    +D  +  +     H +  A        
Sbjct: 71  --------GKAVLVPEVKQALDVFVEAGLMAGEFDEEYGGMQLP--HVVGQAVFAWFKAA 120

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G    P +T  +   L+              S+E   T   P  +      + L+E +
Sbjct: 121 NVGTSAYPFLTMGNARLLLA-----------HGSKEQVDTYVRPEIEGRWFGTMALSEPQ 169

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255
            G+ +A IT++     DG Y L+G+K ++S    +       ++LA++ G       +  
Sbjct: 170 AGSSLADITTRAVPQDDGTYRLTGNKMWISGGDHELTENIVHLVLAKIPGGPPGVKGISL 229

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLG 300
           F+VP+ L D     G  N +    L +K+G R      L F              G L+G
Sbjct: 230 FIVPKFLVDPDGSLGERNDVVLAGLNHKMGYRGTTNTLLNFGEGVHTPGGRPGAVGHLVG 289

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------IL 349
           + +     +  M     +   + +          A+ YAR R                 +
Sbjct: 290 EPHRGLTYMFHMMNEARIGVGMGATVLGYTGYLHALEYARTRTQGRRAGAKDPDSPPVPI 349

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403
           I+ P ++R +           AL    A   DE ++      R+        + PI K W
Sbjct: 350 IEHPDVRRMLLAAKSYAEGGLALGLYCARLVDEEQTAETEEERARAHLLLDTLTPIAKAW 409

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
             +  P     A++  GG GY  +  + + YR++  N I  G+     LD+L   ++ +G
Sbjct: 410 PSQWGPVADDLAIQVHGGYGYTRDYPVEQFYRDNRLNPIHEGTNGIQALDLLGRKVVAQG 469

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT--------EKIALASS 513
                 L  T+     ++ +   T      +           +T          +ALA++
Sbjct: 470 GAGLRLLGETIG---ATTARAAGTQWAAFAADLDAAVARTSSVTTTLWGTGDPDLALANA 526

Query: 514 AAALYRAGMNDIADVFLENRFL 535
           +  L   G   +A ++LE    
Sbjct: 527 SVYLEAVGHLVVAWLWLEQALA 548


>gi|299768736|ref|YP_003730762.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298698824|gb|ADI89389.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 385

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P    W+     P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVQNELNPHIP---EWEAAGKFP-IHDVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G+     V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGYAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKNKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +  ++       +A + K    ++   V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLTREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|83748989|ref|ZP_00945997.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|83724327|gb|EAP71497.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551]
          Length = 419

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 76  AIFREMGALGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 135

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 136 EFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVTRAKKVDG 182

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 183 GYSLTGAKMWITNSPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRT 242

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+   + F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 243 SITGEIVLDDVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQY 299

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 300 VLNRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 352

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 353 IMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 411

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 412 QTGIQAF 418


>gi|320035110|gb|EFW17052.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 614

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 122/595 (20%), Positives = 221/595 (37%), Gaps = 77/595 (12%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q P  I  +    DS+   +++       P  ++++L      VLS   Q
Sbjct: 2   EPSSSTAGFFQSPPVIPPSI-EDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P +      G   + D +     W  L    I +G+  S ++++      
Sbjct: 61  SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKASGGD-L 119

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 ++ + +L     A      ++T  +   L      H D        E      +
Sbjct: 120 WNNRVYQSLKFFLWVPSAAMVTCPSAMTDGAACLLGR----HLDGENGEIFAEARRRLTS 175

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKW 233
                +   G  +TE++GG+D+    +  +K+S                 G + + G KW
Sbjct: 176 RDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMPLGPWRIDGFKW 235

Query: 234 FLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNA 285
           F S+  ++  I+LA+   +G V  F  P          +   NG+  QRLKNK+G +   
Sbjct: 236 FSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQRLKNKLGTKPVP 295

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T ELE      +L+G        +  +  +  L +AI +VS     LA +  YA+ R V 
Sbjct: 296 TAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAISKAYAKVRAVR 355

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEA--------- 390
             +L+D P   R +A   +  AA T L+F +A         +  ++ + +A         
Sbjct: 356 NTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAAQANIVPQTPQQ 415

Query: 391 --AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIARHYRESPANSILL 444
             A  R++ P+ K      A   +   ME +GG GY+E      +IAR +R++   SI  
Sbjct: 416 AHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDACVLSIWE 475

Query: 445 GSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLG--------SSGKKVITILRDSI--- 491
           G+ + M  DV+ +++  +G      L + +   L         +  +++  +    +   
Sbjct: 476 GTTDIMADDVVRVVKGREGPQCLAVLGAWVSNALNVSNSKGFHNEARQLQRVWEQWLTGV 535

Query: 492 --SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF--LENR--FLDNCHS 540
                ++ K   R     +        L      D  D+   +  R    D+   
Sbjct: 536 NNKDKEQLKWEGRNYLRDLEHVVCGCLLILDASRDQDDIAREIARRWILGDDASQ 590


>gi|298484981|ref|ZP_07003079.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298160535|gb|EFI01558.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 600

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 97/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +   +    +  T        
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQRFLQSMIEGRFFGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 162 -----MALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKHNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|110833845|ref|YP_692704.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110646956|emb|CAL16432.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 388

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 138/380 (36%), Gaps = 37/380 (9%)

Query: 93  RWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           R  +   H  +H  ++      G   S     +        ++ + A  +  +       
Sbjct: 38  RVLEANRHEIFHREIMTEMGAQGFLGSTIPEQYGGAGVNHVSYGLVAREVERVDSGYRSA 97

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    +  V   + PK+ S E+                 GLTE   G+D
Sbjct: 98  MSVQSSLVMFPIYTFGSEAVRNKYLPKLASGEW-------------VGCFGLTEPDHGSD 144

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             +++++ +K+  G        W  +SP++D  ++ A ++G++  F+V R       +G 
Sbjct: 145 PGSMSTRAKKVDGGYLLNGSKTWITNSPIADVAVVWANLDGKINGFVVER-----GFDGF 199

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +++ K   R++ T ++   + F      L+V             L+ A   +S   +
Sbjct: 200 SAPKIEGKFSLRASITGQIMLDDCFVPEQNRLDVEGLKG----PFSCLNKARYGISWGAM 255

Query: 331 SLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE    A R     R   G  L    ++++ +AD+  +I      + +L    D    
Sbjct: 256 GAAEFCWQAARQYTLDRKQFGRPLAATQLIQKKLADMQTEITLGLQGALQLGRLIDAGN- 314

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                 +A  M  + K   C  A  +  +A +  GG+G  +E  + RH     A +   G
Sbjct: 315 ------WAPEMVSLMKRNNCGKAIDIARQARDMHGGNGISDEYHVIRHVMNLEAVNTYEG 368

Query: 446 SGNAMVLDVLNLLEKGTNLF 465
           + +   L +L   + G   F
Sbjct: 369 THDVHAL-ILGRAQTGLQAF 387


>gi|157864298|ref|XP_001680859.1| acyl-coenzyme a dehydrogenase [Leishmania major strain Friedlin]
 gi|68124151|emb|CAJ02134.1| putative acyl-coenzyme a dehydrogenase [Leishmania major strain
           Friedlin]
          Length = 416

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 133/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 66  PVAAEYDRSMKYP--HDVYKQAWELGLTNMHIPTKYGGLGASVMDGLVVQEELAYACSGM 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T   +  +  ++              +  +     +TE  GG
Sbjct: 124 ATAFEGNSLAEAPLLIAGTDVQNAKYLSRMV-------------EEPLLAAYCVTEPTGG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  +++ + +LA+ EG    F+V     D    
Sbjct: 171 SDVAGMKTVAKKEGDKWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-----DADTP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   + +  +G R + T  + F N        +     G    M++        AI +V
Sbjct: 226 GVSLGQKEVMLGQRCSDTRSIMFENVVVPEENVVGEVGKGFQVAMRVFDFTRSAVAISAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 286 GLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAGWETDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA      C          A++  GG+GY     + + YR+    SI  G
Sbjct: 346 NTYYASCAKMMASNLAEKCS-------TNAVQIFGGNGYNTGYPVEKLYRDCKIFSIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 399 TTQIQHAIIGRYV 411


>gi|303323515|ref|XP_003071749.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111451|gb|EER29604.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 614

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 122/595 (20%), Positives = 221/595 (37%), Gaps = 77/595 (12%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q P  I  +    DS+   +++       P  ++++L      VLS   Q
Sbjct: 2   EPSSSTAGFFQSPPVIPPSI-EDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P +      G   + D +     W  L    I +G+  S ++++      
Sbjct: 61  SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKASGGD-L 119

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 ++ + +L     A      ++T  +   L      H D        E      +
Sbjct: 120 WNNRVYQSLKFFLWVPSAAMVTCPSAMTDGAACLLGR----HLDGENGEIFAEARRRLTS 175

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKW 233
                +   G  +TE++GG+D+    +  +K+S                 G + + G KW
Sbjct: 176 RDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMPLGPWRIDGFKW 235

Query: 234 FLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNA 285
           F S+  ++  I+LA+   +G V  F  P          +   NG+  QRLKNK+G +   
Sbjct: 236 FSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQRLKNKLGTKPVP 295

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T ELE      +L+G        +  +  +  L +AI +VS     LA +  YA+ R V 
Sbjct: 296 TAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAISKAYAKVRAVR 355

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEA--------- 390
             +L+D P   R +A   +  AA T L+F +A         +  ++ + +A         
Sbjct: 356 NTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAAQANIVPQTPQQ 415

Query: 391 --AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIARHYRESPANSILL 444
             A  R++ P+ K      A   +   ME +GG GY+E      +IAR +R++   SI  
Sbjct: 416 AHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDACVLSIWE 475

Query: 445 GSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLG--------SSGKKVITILRDSI--- 491
           G+ + M  DV+ +++  +G      L + +   L         +  +++  +    +   
Sbjct: 476 GTTDIMADDVVRVVKGREGPQCLAVLGAWVSNALNVSNSKGFHNEARQLQRVWEQWLTGV 535

Query: 492 --SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF--LENR--FLDNCHS 540
                ++ K   R     +        L      D  D+   +  R    D+   
Sbjct: 536 NNKDKEQLKWEGRNYLRDLEHVVCGCLLILDASRDQDDIAREIARRWILGDDASQ 590


>gi|33591834|ref|NP_879478.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571477|emb|CAE44966.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381251|gb|AEE66098.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 386

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 147/398 (36%), Gaps = 29/398 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +ELAR       +     P  + W+  +  PA H +++     GL        +  
Sbjct: 4   THEHRELARTTRRIIAE--HLDPYLDEWEAAQMFPA-HQVMKALGSAGLLGIGKPAEYGG 60

Query: 127 VVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
           +    ++++  A     + +   +  +   S      +A   +  + + +          
Sbjct: 61  MALDFSYEMVFAETLGEVRSSGLSSAIGVQSTMCTPALARHGSDALKRAYL--------- 111

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
               AP     +   +G +E   G+D++ I +  ++  D         W  +    D   
Sbjct: 112 ----APTIAGDLVGCIGASEASAGSDVSQIKTWARRDGDDYVINGSKMWITNGVQGDWIC 167

Query: 245 MLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LG 300
           +L       G       ++      G+   R  +K+  R++ T EL F +    +   +G
Sbjct: 168 LLCNTSQEGGPHKNKSLIIVPLDTPGVSVSRKLDKLVLRASDTAELFFDDVRVPVSNRIG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             N+      +      +  A   +  M   + E I YA +R V GG ++   V+   +A
Sbjct: 228 AENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  +I A  +L +R    + + +  ++       +A + KY   +++  +  E ++  G
Sbjct: 288 QMQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G G + E  I+R YR+    +I  G+   M+  +   +
Sbjct: 341 GQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTM 378


>gi|221211964|ref|ZP_03584942.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221168049|gb|EEE00518.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 388

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 128/378 (33%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+    P W  L   +   GL+      ++          +   R    A    
Sbjct: 34  PRAAEYDRSGTFP-WDNLRAINA-LGLNAMFVPEAYGGAPLSYLCYLACVREISKACAST 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G + + +  +   +             P+I                     L +TE   G
Sbjct: 92  GIIWATNFHAIKPLIEYGNEAQKNRLLPRIAEG--------------ALASLAITESAAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ---VEGRVGCFLVPRLLEDG 265
           +D   + +      D I    G  +  +  ++D +++  +   ++       +  L+ + 
Sbjct: 138 SDATGMRTTFTPDGDDIVVNGGKIFITNGDVADLYLLFGKWSTIDDAKAA--ISVLILEK 195

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
             +GL     ++K+G R+++T  L F         L+G+       +           A 
Sbjct: 196 GTDGLRVLGTEHKMGTRASSTASLSFDGCRVPRANLIGNPGDGLRILFGSLNRSRPSIAA 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   R +  +A+ Y   R  SG  +++   ++  +AD+A ++    +L ++L    D 
Sbjct: 256 HALGIARAAFEDAVDYINERRQSGKRILEFQGIQFMLADMASELILCESLLWQLGARIDA 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +          + A + K      A  +  +A++  GG GY  +  + R  R++    I
Sbjct: 316 GEQD------FGVEASVLKQRASDAAMRITTDAVQLFGGYGYCNDYRVERLMRDAKITQI 369

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +     K
Sbjct: 370 WEGTNQIHRQLIGRSFLK 387


>gi|309812442|ref|ZP_07706197.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308433747|gb|EFP57624.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 391

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 136/377 (36%), Gaps = 37/377 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMS 153
           DK    P  + ++      GL    +   F  +         A      + Q  A  L +
Sbjct: 37  DKDHTFP--YEVVSGMAEMGLFGIPFPEEFGGMGGDYFALCLALEELAKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    +    + W P + S E                G GLTE   G+D + 
Sbjct: 95  GVGLGAMPIYRFGSQEQKEQWLPMLASGE-------------ALGGFGLTEAGAGSDASG 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV------EGRVGCFLVPRLLED 264
             +  ++  D  + ++G K F+++  +D      + A        +GRV    +  ++  
Sbjct: 142 TRTTAKEDGDE-WVINGSKQFITNSGTDITKLVTVTAVTGESQTADGRV-KKEISTIIVP 199

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
            +  G   +   +K+G  ++ T  L FS+        L     G    ++IL    +  A
Sbjct: 200 ANTPGFTAEPAYDKVGWNASDTHPLSFSDVRVPRANLLGERGRGYANFLRILDEGRIAIA 259

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            ++V   +  + E++ YA+ R   G  + +   ++  IA +      A +  +  A    
Sbjct: 260 ALAVGAAQGCVDESVKYAKERQAFGHAIGEYQAIQFKIARMEARAHTARSAYYNAAALML 319

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +        A I K    + A     +A +  GG G++ E  ++RHYR+S    
Sbjct: 320 AGKPFKKA-------ASIAKMVASESAMDNARDATQIHGGYGFMNEYVVSRHYRDSKILE 372

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 373 IGEGTTEVQLMLIAREL 389


>gi|254482196|ref|ZP_05095437.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037521|gb|EEB78187.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 393

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 138/395 (34%), Gaps = 41/395 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q+ AR   Y   +L        R ++ +       + R     GL  S  +    P 
Sbjct: 26  RMVQQSARQ--YAQEKLLPRVRDAFRAEETDLS-----IFREMGELGLLGSTIEGYGCPG 78

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
           V   ++ + A  +  +       +   S      +         + + PK+ + E+    
Sbjct: 79  VDYISYGLVAREVERVDSGYRSMMSVQSSLVMYPIDAYGNESQREKYLPKLATGEW---- 134

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                        GLTE   G+D  ++ ++ + +  G        W  +SP +D F++ A
Sbjct: 135 ---------IGCFGLTEPDHGSDPGSMVTRARSVDGGYSVSGAKMWITNSPFADVFVVWA 185

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + +       +   + +   +GL   +++ K+  R++ T E+     F            
Sbjct: 186 KTDDDK----IRGFILEKGMDGLSAPKIEGKLALRASVTGEIVMDEVFVPEEN----LLP 237

Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361
            VE +K     L++A   ++   +  AE   +A       R   G  L  + +++  +AD
Sbjct: 238 NVEGLKGPFGCLNNARYGIAWGSLGAAETCWHAARQYTMERKQFGVPLASKQLVQLKLAD 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I+ A     R     D           A  +  + K   C  + A+   A + +GG
Sbjct: 298 MQTEISLALQGCLRAGQLMDAGD-------IAPELISLIKRNSCGKSLAIARTARDMLGG 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +G  +E  I RH       +   G+ +   L +  
Sbjct: 351 NGISDEYPIMRHMVNLEVVNTYEGTHDVHALILGR 385


>gi|196248254|ref|ZP_03146955.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
 gi|196211979|gb|EDY06737.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16]
          Length = 392

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 122/375 (32%), Gaps = 39/375 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +        H ++A  L  +A+         S   A  + 
Sbjct: 48  KELQLKAKEAGFWGINTPEEYGGANL--GHVMQAIVLMEVAKTLVPFQFGGS---ADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K +               P           +TE   G+D   I     K  D
Sbjct: 103 YYANEEQKKKYLI-------------PTINGEKKSCFAMTEPGAGSDTRNIKMTAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K F++    +D  +++A  +        G   V   + D            +
Sbjct: 150 E-WVLNGEKTFITGGNDADFVMVIAITDKERHQATNGREGVTCFIVDRDMG--WRSEPIH 206

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G   +    L F N        LG+L+       +            +V      L  
Sbjct: 207 TMG--PSTPASLIFENVRVPEENILGELHYGYKLGLEWIGYARWVVGARAVGTAERLLQM 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  + ++  ++  IAD A++I AA  L    A + DE +         R
Sbjct: 265 AIDYAKERVTFGKPIAERQAIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------R 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +A + K +   M   V+   M+  GG GY +E  I R YRE+    I  G+     L +
Sbjct: 318 HLASMAKLFGANMGNRVVDRVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLII 377

Query: 455 LNLLEKGTNLFEQLF 469
              L KG     Q  
Sbjct: 378 ARNLIKGHVKLGQFL 392


>gi|254428631|ref|ZP_05042338.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194800|gb|EDX89759.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 395

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 145/405 (35%), Gaps = 43/405 (10%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A  +Y   +L        R +   FH     ++      G         +  
Sbjct: 25  EDERMIRDAAQDYCQSKLMTRVLEANRHE--IFH---REIMTEMGALGFLGPTIPEQYGG 79

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ + A  +  +       +   S      +    +  V + + PK+ + E+  
Sbjct: 80  AGVNHVSYGLVAREVERVDSGYRSAMSVQSSLVMFPIYTFGSEAVREKYLPKLATGEW-- 137

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  +++++ +K+  G        W  +SP++D  ++
Sbjct: 138 -----------VGCFGLTEPDHGSDPGSMSTRAKKVDGGYLLNGAKTWITNSPIADVAVV 186

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A ++G++  F+V R       +G    +++ K   R++ T ++   + F      L+V 
Sbjct: 187 WANLDGKINGFVVER-----GFDGFSTPKIEGKFSLRASITGQISLDDCFVPEENRLDVE 241

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIA 360
                       L+ A   +S   +  AE   +A R     R   G  L    ++++ +A
Sbjct: 242 GLKG----PFSCLNKARYGISWGAMGAAEFCWHAARQYTLDRKQFGRPLAATQLIQKKLA 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I      + +L    D      E       M  + K   C  A  +  +A +  G
Sbjct: 298 DMQTEITLGLQGALQLGRLMDAGDWSPE-------MVSLMKRNNCGKAIDIARQARDMHG 350

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           G+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 351 GNGISDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|300704832|ref|YP_003746435.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299072496|emb|CBJ43846.1| dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 397

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGALGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 114 EFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLTGAKMWITNSPIADVFVVWAKLPDENGDDPIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+   + F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 221 SITGEIVLDDVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 VLDRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGIQAF 396


>gi|255595297|ref|XP_002536273.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223520232|gb|EEF26111.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 367

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 131/361 (36%), Gaps = 30/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH---LMSPSVTSASM 161
            +       G +      ++  +     H    A    +A+L       + S       +
Sbjct: 28  QVESTLREMGFYGMAIPEAYGGM--PVDHLTSVAVQLELARLPPQFWPFVRSAIGPGVHI 85

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  + K W P+I S                   + +TE   G+D A + +  ++ 
Sbjct: 86  IVDHGSEALKKKWLPEIASG-------------RSRNCIAITEPHAGSDAARMLTSARRE 132

Query: 222 SDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  Y L+G K F+S+        +LA  +   G   +   L D +  G    R    +G
Sbjct: 133 GDH-YVLNGTKTFISNANHAHSITVLASTDRAAGKHGISAFLLDTTTPGFEVARTMPTMG 191

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              ++  E+ F++       LLG+                L+    ++   +++L E I 
Sbjct: 192 WMDDSLCEITFTDCRIPVENLLGEEGRGLSYAMSGLNEGRLNVGCQALGPAQIALDETIE 251

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +AR R   G  L +   ++  IAD+A+D+ AA  + F         +        AR+ A
Sbjct: 252 HARTRVTFGQALAEHQAIQHMIADMAMDLHAARMVLFEAVWRATRGED-------ARMKA 304

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K  C + A  +  +A++  GGSGY     + R YR+     I  G+       +   
Sbjct: 305 SMVKVICTEAACRIADKALQIFGGSGYCRGTIVERVYRDLRVLRIYEGASEIHRNMIARQ 364

Query: 458 L 458
           L
Sbjct: 365 L 365


>gi|296162198|ref|ZP_06844994.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295887584|gb|EFG67406.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 396

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 140/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIHEFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DAIRGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AEA  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  +
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|315653001|ref|ZP_07905945.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
 gi|315484741|gb|EFU75179.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986]
          Length = 242

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 22/249 (8%)

Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRL 275
            +  Y L+G K F+++   +D ++++A  E           +    L +    G  +   
Sbjct: 2   DNDEYVLNGSKIFITNGKEADIYVVIACTEVKVDAKGRKKKVFSAFLVEKGTPGFNFGTK 61

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE 334
           + K+G R ++T EL F++         N+     +   I ++ LD   + ++   + +AE
Sbjct: 62  EKKMGIRGSSTYELIFNDCRVP---KENMLGPAGKGFGIAMHTLDGGRIGIAAQALGIAE 118

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                 I Y + R   G  +      +  +A++A  + AA  L +R A +    K+ SEE
Sbjct: 119 GALERTIAYVKERKQFGRTISAFQNTQFELANMATKVKAAQMLVYRAAMAKATQKTYSEE 178

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +  ++A  V  +A++  GG GY  E  I R  R++    +  G+   
Sbjct: 179 AAMA-------KLFAAEVAMEVTTKAVQLHGGYGYTREYEIERMMRDAKITEVYEGTSEV 231

Query: 450 MVLDVLNLL 458
             + +   L
Sbjct: 232 QRMVIAGAL 240


>gi|312197209|ref|YP_004017270.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228545|gb|ADP81400.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 382

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 140/417 (33%), Gaps = 45/417 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +L          TA+E  R      P+L  +       D+            ++   
Sbjct: 1   METDLYEADHEAYRTTAREFMR--REVVPRLGDWDVR-REVDR--------DTWTKAGAA 49

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA----LMTTPR 169
           GL        F        ++ R      +A   A  L S    +  +V        T  
Sbjct: 50  GLVGLAVPERFGGAGMND-YRYRFVVSEEIADAGAAALQSAFAVNDDIVLGYLLAQATEE 108

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               W P   S E                 + ++E   G+D+  I +Q  +  D  + L+
Sbjct: 109 QKARWLPGFASGE-------------TISAIAMSEAEAGSDLRGIATQAVRKGD-RWLLN 154

Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+S+ + +D  I+ A+ +   G       + +    G    R  +KIG  +  T E
Sbjct: 155 GSKTFISNGITADLVIVFARTDAAEGAGGYSLFVVERGMPGFERGRKLDKIGLAAQDTAE 214

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH 343
           L F +        L  +   +  +  +  L    M ++      AEA     + Y R+R 
Sbjct: 215 LFFHDVEVPADNLLGSAGAGLRSL--MENLPRERMGIAVAAQCSAEASLRWTVDYVRQRR 272

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +   +   +A++   +    A   R     +     + +AA A+        W
Sbjct: 273 AFGKAVAEFQTVGFTLAELRTQVEVTRAYLDRCVRQLNAGALSAVDAAKAKW-------W 325

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              +   VI   ++  GG GY+ E  IAR + ++    I  G+   M   +   L +
Sbjct: 326 ATDVQWKVIDAGVQLHGGYGYMTEYPIARAFMDARVQRIYGGTNEIMKEIISRDLLR 382


>gi|260466647|ref|ZP_05812835.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029653|gb|EEW30941.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 398

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 127/364 (34%), Gaps = 30/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +  +          AR           +MS  S      +    
Sbjct: 58  REMGEAGLLGITIPEEYGGLGANYVTYGLVAREVERVDSGYRSMMSVQSSLVMYPIHAYG 117

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K + PK+ S E+                 GLTE   G+D   + ++ +K +DG  
Sbjct: 118 SEAQRKKYLPKLASGEW-------------IGCFGLTEPDAGSDPGGMKTRAEKTADGYK 164

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++ A+++G  G   +   + +    GL   ++  K+  R++ T
Sbjct: 165 LTGSKMWISNAPIADVFVVWAKLKGDNGKDEIRGFVLEKGMKGLSAPKIGGKLSLRASIT 224

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+            L  + G          L+ A   +S   +  AE   +  R     
Sbjct: 225 GEVVMEGVEVGEDALLPNAKGLGGPFG---CLNRARYGISWGAMGAAEDCWHRARQYGLD 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + ++ +AD+  +IA     S R+    DE K        A  M  I K
Sbjct: 282 RKQFGKPLAGTQLFQKKLADMQTEIALGLQGSLRVGRLMDEGK-------MAPEMISIVK 334

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +  +A +  GG+G      + RH +     +   G+ +   L +L   + G
Sbjct: 335 RNNCGKALDIARQARDMHGGNGIQIGYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTG 393

Query: 462 TNLF 465
              F
Sbjct: 394 IQAF 397


>gi|226308679|ref|YP_002768639.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187796|dbj|BAH35900.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 385

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 132/376 (35%), Gaps = 31/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
           E+W++    P      RR    G+        +     K     +  A     A    G 
Sbjct: 30  EKWEEDGHPP--RDFYRRLGELGVLGIQVPEEYGGGGEKSLKFNVVVAEEVAAAGASFGS 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +           W P   S               +   + +TE   G+D
Sbjct: 88  QSVHTNLILPYLLEYANDEQKSRWLPGFASG-------------DLMFAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF---LVPRLLEDG 265
           +A I +  +   DG  Y ++G K F++  + +D  +++ +            +  L+ D 
Sbjct: 135 LANIATTAKLSEDGTHYVVNGSKTFITGGVLADRVLVVCRTAPSTAENRRTGLSILVVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           S  G    R  NKIG +++ T EL F +    +   LG+       +        L  A 
Sbjct: 195 SSPGYSVGRKINKIGLKTSDTAELSFVDVQVPVEDRLGEEGDGFSYLTHNLAQERLTIAF 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +    +L  AI Y + R V G  +      K  +A+ A ++ A   +S       D 
Sbjct: 255 GAAATASAALRFAIDYVKDRKVFGKPVAAFQNTKFVLAECATEVDAIQLVSDNALECHDR 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++    I
Sbjct: 315 GTLTIADAAKA-------KLFCTEAAGRVIDKCLQLHGGYGYITEYPIARLYADTRVTRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 368 YGGTSEVMKTIIAKDL 383


>gi|323524855|ref|YP_004227008.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323381857|gb|ADX53948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 396

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 140/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DTIRGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AEA  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  I
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGI 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|209517637|ref|ZP_03266475.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209501933|gb|EEA01951.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 396

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 138/395 (34%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +      + P++   E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIHEFGSDAQKDKYLPRLARGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-EDGN 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    +  K+G R++ T E+     F     + N+  G        
Sbjct: 192 DNIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVP---EENIMPGVSGLRGPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AEA       Y   R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAEACWHISRQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  +
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 395


>gi|255292434|dbj|BAH89552.1| acyl-CoA dehydrogenase [uncultured bacterium]
          Length = 383

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 127/323 (39%), Gaps = 12/323 (3%)

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           Y+   L    L +     ++M+++   P        +  S E       P  + +     
Sbjct: 66  YVSYALSLMELAAGDGAVSTMMSVHNAP--FCAILQRFASPEQQDAWLKPAAQGAFIGCF 123

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            LTE   G+D AAI ++  + +DG       ++  S+ +  A I  A  +   G   +  
Sbjct: 124 ALTEPGTGSDAAAIKARAARSNDGYVLNGAKQFITSARIGGATIAFAVTDPDAGKKGISA 183

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
              + +  GL     + K+G +++ T  L F +     G L+G+                
Sbjct: 184 FYIEQANPGLIVAEPERKLGQKASDTCALTFEDLRLDAGALIGEEGQGLAIALSSLEAGR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  SV   + +L  A  YA  R   G  + +   +   +AD+   + AA  L    A
Sbjct: 244 IGIASQSVGMAQAALEYATAYALERVTFGKPIFEHQAVAFRLADMDAQVEAARQLVLNAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D  +    E       A I K    + A  VI++A++ +GG GY+ E  + R YR++
Sbjct: 304 RTKDLGQPCLRE-------ASIAKLIASQTAERVISDAIQTLGGYGYLSEYPVERIYRDA 356

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+ +   +++   L++
Sbjct: 357 RVCQIYEGTSDVQRINISRDLKR 379


>gi|300785222|ref|YP_003765513.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299794736|gb|ADJ45111.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 384

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 132/379 (34%), Gaps = 29/379 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D  + +P   AL+ R    G+       ++                     +     
Sbjct: 28  RELDHTDTYPE--ALIERMKELGVFGLAVPEAWGGTPVSARCYAEVTEELACGWMSLAGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M      A ++    T    + + P++ + E             V   + LTE  GG+D+
Sbjct: 86  MGGHTVVAKLIVTYGTREQQERYLPRMATGE-------------VRATMALTEPGGGSDL 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNG 269
            A+ +  ++  +         W  ++  S    +L + +         +  LL +    G
Sbjct: 133 QALRTTARRAGESYVVDGAKTWITNARRSQLVALLCKTDPHAEPAHAGISILLAEKGA-G 191

Query: 270 LCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
               R   K+G +   + EL FS+        L G+       +     +  +  A  ++
Sbjct: 192 FHVSRDLPKLGYKGVESCELSFSDFRVPVGALLGGEEGRGFAQMMRGLEIGRIQVAARAL 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +LA+++ YA+ R   G  +     +   +AD+A  + AA  L    A  +D    
Sbjct: 252 GVGRAALADSLRYAQERETFGKPIWQHQSVGNLLADMATKLEAARQLVHHAARRYDSG-- 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A + A + K +  + A  +   A+   GG GY  E  + R++R++P   +  G
Sbjct: 310 -----ARADLEAGMAKLFASETAMEIALNAVRVHGGYGYSTEFDVERYFRDAPLMIVGEG 364

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +       +   L +   L
Sbjct: 365 TNEIQRTVITRQLIRRHRL 383


>gi|257482485|ref|ZP_05636526.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 600

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|55978299|ref|YP_145355.1| acyl-CoA dehydrogenase, short-chain specific ( AidB protein)
           [Thermus thermophilus HB8]
 gi|55773472|dbj|BAD71912.1| acyl-CoA dehydrogenase, short-chain specific (probable AidB
           protein) [Thermus thermophilus HB8]
          Length = 541

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 107/458 (23%), Positives = 182/458 (39%), Gaps = 41/458 (8%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y +D  L  L+ +F         EL   G Y+     +    +     P+L  +  
Sbjct: 17  GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    +L+R                P     +     A  YL+A     
Sbjct: 77  DGNRVDRVRLSPVQREVLKRLR----------PIVRPPYEGGSWHHHFALGYLLADGGLY 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +           +AP + S       K  +          +TE +GG+
Sbjct: 127 CILTITHQVAYPIH---------KYAPGLASW------KERVLYGEAFGATWMTEIQGGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A  +  ++  +      G K+F S   ++D  ++ A+ EG       +  FL+PRL 
Sbjct: 172 DLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLPRLD 231

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +G  N    +RLK K G R+  + E+E   +  +L+G          +   +  L +AI
Sbjct: 232 REGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLANAI 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L E     RRR   G  L D P+++  + D+++  A   AL+     +FD 
Sbjct: 291 AAMGIAAKALLETRQRVRRRQSFGRFLADHPLVRHDLLDLSVRQAGGLALALAAVEAFDR 350

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A        E    AR ++ + K    + +  +   AME  GG G++EE ++AR +RES 
Sbjct: 351 AWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHRESL 410

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
              I  G  N   LD+L  ++K         + LE  L
Sbjct: 411 ITPIWEGPSNIQALDLLEAMQK-KGAHRPFLAWLEARL 447


>gi|86142806|ref|ZP_01061245.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85830838|gb|EAQ49296.1| acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 602

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/441 (16%), Positives = 159/441 (36%), Gaps = 41/441 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            ++R++   GL        ++ +       +        A    A    + +      + 
Sbjct: 68  EVMRKAGELGLLGIAVPDEYDGLGMGFVSTMLVCDYISGATGSIATAFGAHTGIGTMPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + PK+ + E+                  LTE   G+D  +  ++ +  +D
Sbjct: 128 LYGTEEQKKKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTKAELSAD 174

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G          W  ++   + FI+ A++E      +   ++E+ S NG+     + K+G 
Sbjct: 175 GKSYKINGQKMWISNAGFCNLFIVFARIEDDK--NITGFIVENDSSNGISLGEEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEA 335
            S++T ++ F++T   +    N+  G  E  KI +  L+   + ++       R  +   
Sbjct: 233 HSSSTRQVFFNDTVVPV---ENMLAGRGEGFKIAMNALNVGRIKLAAACLDAQRRIIDMG 289

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSE 388
           + YA  R      +     +K  +A++A +     + S+R A + ++  +         +
Sbjct: 290 VKYANERVQFKTPIAQFGAIKYKLAEMATNAYVCESASYRAAKNIEDRIAIRMADGNSHQ 349

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   I K    +       E ++  GG G+  +  +   +R++  + I 
Sbjct: 350 EAELKGVEEYAIECSILKVAASEDMQNCADEGIQIYGGMGFSADAPMEAAWRDARISRIY 409

Query: 444 LGSGNAMVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
            G+     +  + +L +K       L +                  D   +  E+K +  
Sbjct: 410 EGTNEINRMLAVGMLVKKAMKGHVDLLNPAMAVADELTGIPSFDTPDYSEVLSEEKAMIA 469

Query: 503 FLTEKIALASSAAALYRAGMN 523
            L +K+ L  + +A+ + G  
Sbjct: 470 KL-KKVFLMVAGSAIQKYGPE 489


>gi|163756359|ref|ZP_02163473.1| isocitrate lyase [Kordia algicida OT-1]
 gi|161323711|gb|EDP95046.1| isocitrate lyase [Kordia algicida OT-1]
          Length = 603

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 74/442 (16%), Positives = 161/442 (36%), Gaps = 43/442 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++R++   G        +++ +        +    +       A    + +      + 
Sbjct: 67  EIMRKAGELGFLGIAVPEAYDGMGMGFVSTMLTCDYISGATGSIATAFGAHTGIGTMPIT 126

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + P + + E                   LTE   G+D  +  ++     D
Sbjct: 127 LYGTEEQKKKYVPALAAGE-------------KFGAYCLTEPGAGSDANSGKTKAVLSED 173

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G  Y +SG K ++S+   ++ FI+ A++  +  +  F+V    +  +PNG+     ++K+
Sbjct: 174 GKHYLISGQKMWISNAGFAEIFIVFARIEDDKNITGFIVEF--DKDNPNGMTLGEEEHKL 231

Query: 280 GNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G  S++T ++ F+ T   +   L     G    M  L    +  A   +   R  + EA 
Sbjct: 232 GIHSSSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGRIKLAAACLDAQRRVITEAT 291

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSEE 389
            YA  R      +     +K  +A++A       +  +R A + ++  +         +E
Sbjct: 292 KYANERIQFKTPIAKFGAIKAKLAEMATSCYVGESACYRAAKNIEDRIAIRESEGNTHQE 351

Query: 390 AAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           A         I   I K    +    V  E ++  GG G+  +  +   +R++  + I  
Sbjct: 352 AELKGVEEYAIECSILKVKISEDIQNVTDEGIQIFGGMGFSADTPMESAWRDARISRIYE 411

Query: 445 GSGNAMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           G+     +  + +L     KG     +    +  +L +     I    +     +E + L
Sbjct: 412 GTNEINRMLAVGMLVKKAMKGHVNLLEPAMKVADELMAIPSFDIPDYSEL--FAEEKELL 469

Query: 501 ARFLTEKIALASSAAALYRAGM 522
            +   +K+ L  + +A+ + G 
Sbjct: 470 GKL--KKVFLMVAGSAVQKFGP 489


>gi|111019706|ref|YP_702678.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819236|gb|ABG94520.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 381

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 129/368 (35%), Gaps = 36/368 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------- 158
           + +R I   +        +  +   + +   AA  Y    +    L   S  +       
Sbjct: 33  IEQRYIDREIWLEAGANGYLGLEVPEQYGGSAAGDYRFNAVLGEELARSSAAAASSFGIQ 92

Query: 159 ----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A  +  +TT    + W PK  + E             +   + +TE  GG+D+A +
Sbjct: 93  FDVVAPYLVTLTTEEQRQRWLPKFCTGE-------------LITAIAMTEPSGGSDLAGL 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +   K     + ++G K F+++   +D  I+  +     G   +     D    G    
Sbjct: 140 KTTAVKDG-ATWVINGSKTFITNGTQADLIIVATRTTREKGSKGITLFAVDADTAGFTRG 198

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRV 330
           R  +K+G   + T EL F +        +         M  L     +  A+  ++  R 
Sbjct: 199 RKLDKVGQPESDTAELFFEDVRVDDTAIIGELDRGFIHMMNLLPQERISGAVAYLAHTRR 258

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L E + YA+ R   G  +      K  +A++   +  A A       +    +  + +A
Sbjct: 259 ILEETVTYAQDRKAFGKTIGSMQWNKFLLAELVTKLDVAQAHVDTCVAAHIAGELTAVDA 318

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A+        W   +   ++   ++  GG GY+ E  +AR ++++    I  GS   M
Sbjct: 319 AKAKW-------WSSTIQNDILDHCVQIHGGYGYMNEYRVARAWKDARVTKIWAGSNEIM 371

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 372 REVIGRDL 379


>gi|295680592|ref|YP_003609166.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440487|gb|ADG19655.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 381

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 133/362 (36%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           + + +R+   G     +  S+     +    +              + +  + T AS+++
Sbjct: 39  YDIWKRAGELGFAGLPYPESWGGGGGEWLSYVIVLEELARVDCAIANSLMANSTVASLLS 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      +               P+        +GL+E   G+D A I ++     D
Sbjct: 99  NYGTDEQKDRYL-------------RPILDGRKVGAIGLSEPNAGSDAANIATRATLEGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAF--IMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + + G K F+S+  ++    +++A V G    G   +   +      G  Y R   KI
Sbjct: 146 -RWIIDGSKTFISNSGTEVTGPVVIAAVTGTRPDGRKEISNFIVPNGTPGFSYGRKLRKI 204

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAI 336
           G R+++T EL F          L      +      I    +    +++  ++ SL  +I
Sbjct: 205 GWRASSTYELFFERCAIPAANLLGERGAGLRQTLAQISTGRILIGALALGILQGSLDRSI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  + +   ++  IAD+A    AA  + +  A   D      ++A+ A   
Sbjct: 265 AYMKERRAFGKPIAEFQALQFKIADMAAHAHAARLMLYDTAALKDAGVRFDQQASMA--- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  + A     +A++  GG G + E  ++R + ++    I+ G+     + +  
Sbjct: 322 ----KLFATECAMEAAHQALQIHGGYGVMSEYPVSRAFGDAKVLEIVEGTSEIQRMIISR 377

Query: 457 LL 458
            L
Sbjct: 378 NL 379


>gi|146071671|ref|XP_001463171.1| acyl-coenzyme a dehydrogenase [Leishmania infantum]
 gi|134067254|emb|CAM65522.1| putative acyl-coenzyme a dehydrogenase [Leishmania infantum JPCM5]
          Length = 416

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 134/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 66  PVAAEYDRSMKYP--HDVYKQAWELGLTNMHIPTKYGGLGASVMDGLVVQEELAYACSGM 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T   +  +  ++              +  +     +TE  GG
Sbjct: 124 ATAFEGNSLAEAPLLIAGTDAQNAKYLSRMV-------------EEPLLAAYCVTEPTGG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  +++ + +LA+ EG    F+V     D    
Sbjct: 171 SDVAGMKTVAKKEGDKWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-----DADTP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   + +  +G R + T  + F N        +     G    MK+        AI +V
Sbjct: 226 GVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTRSAVAISAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 286 GLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAGWETDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA         +A      A++  GG+GY     + + YR+    SI  G
Sbjct: 346 NTYCASCAKMMA-------SNLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDCKIFSIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 399 TTQIQHAIIGRYV 411


>gi|254497994|ref|ZP_05110757.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12]
 gi|254352771|gb|EET11543.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12]
          Length = 381

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 129/369 (34%), Gaps = 36/369 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+R+S   GL        +        A+ +    L          +   S      +
Sbjct: 41  RELIRKSAELGLLGLTLPAEYGGAEASYVAYGLVCQELEKGDSGLRSFVSVQSSLCMYPI 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + P + + E             +    GLTE   G+D A++ +  +K+ 
Sbjct: 101 FRYGSEEQRVRYLPGMATGE-------------IIGCFGLTEPDAGSDPASMRTNAKKVD 147

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  ++P++D  I+ A+ +  +  F+V     D    G+    +K K+  R
Sbjct: 148 GGWRLNGAKMWITNAPIADIAIVWAKTDAGIRGFIV-----DTKSEGVRCPEIKLKMSLR 202

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH---- 337
           ++ T EL F N F     D N+  G  + +   L  L  A   ++   +  A        
Sbjct: 203 ASITGELVFDNVFVR---DENLLPGSEKGLGAALSCLSQARYGIAWGAIGAAIECFDITS 259

Query: 338 -YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R      L    ++++ +AD+  +I  A  L+  +    DE +           M
Sbjct: 260 NYLLERKQFDKPLASFQIIQKDLADMYTEIIKAQCLNLHVGRLKDEKRETP-------TM 312

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L VL 
Sbjct: 313 ISLVKGNSCREALKIARKCRNLLGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLG 371

Query: 457 LLEKGTNLF 465
               G N F
Sbjct: 372 KHITGINAF 380


>gi|148703115|gb|EDL35062.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_b [Mus
           musculus]
          Length = 553

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 151/414 (36%), Gaps = 53/414 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L+        + PK+ S E+                  LTE   G+D A+I ++    
Sbjct: 84  IILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDAASIQTRATLS 130

Query: 222 SDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQR 274
            D  Y  L+G K W  +  +++ F + A+      +G     +    + +    G+   +
Sbjct: 131 EDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVERDFGGITNGK 189

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-- 331
            ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   S+        
Sbjct: 190 PEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRFSMGSAVAGML 246

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +     YA  R      L +  +++   A +A       ++++  +   D+      
Sbjct: 247 KKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPD- 305

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG- 447
                 I A + K +  + A   ++EA++ +GGSGY+++    R  R++    I  G+  
Sbjct: 306 ----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGNQW 361

Query: 448 NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
             + L +    L   G  L  ++      ++ +  + +   LRDS+    +         
Sbjct: 362 RILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVDLGLTGDLGV 421

Query: 506 EKIALASSA---------------AALYRAGMNDIADVFLENRFLDNCHSTHCM 544
              +L  SA                 L R G N + +  +  R  +   + + M
Sbjct: 422 VHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANILINLYGM 475


>gi|322496604|emb|CBZ31674.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 416

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 66  PVAAEYDRSMKYP--HDVYKQAWELGLTNMHIPTKYGGLGASVMDGLVVQEELAYACSGM 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T   +  +  ++              +  +     +TE  GG
Sbjct: 124 ATAFEGNSLAEAPLLIAGTDAQNAKYLSRMV-------------EEPLLAAYCVTEPTGG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  +++ + +LA+ EG    F+V     D    
Sbjct: 171 SDVAGMKTVAKKEGDKWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-----DADTP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   + +  +G R + T  + F N        +     G    MK+        AI +V
Sbjct: 226 GVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTRSAVAISAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 286 GLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAGWETDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA      C          A++  GG+GY     + + YR+    SI  G
Sbjct: 346 NTYYASCAKMMASNLAEKCS-------TNAVQIFGGNGYNTGYPVEKLYRDCKIFSIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 399 TTQIQHAIIGRYV 411


>gi|84687629|ref|ZP_01015504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664419|gb|EAQ10908.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal
           [Rhodobacterales bacterium HTCC2654]
          Length = 369

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 26/305 (8%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    T    +   PK+ +               + +   L+E   G+D++AI +  ++
Sbjct: 85  IIEDFGTEAQRQATLPKVIAG-------------DLVMAFCLSEPHCGSDVSAIRTSAER 131

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNK 278
             DG + L+G+K ++S+ + +   ++ A  +   G    +   L      G     +   
Sbjct: 132 KGDG-WVLNGYKTYVSNGIKAGQAVVAAYTDRSKGAKDGISLFLVPADAPGYKLAGILEL 190

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G+ +    EL F +       L+G+       +        L  A  S+    ++L EA
Sbjct: 191 MGHHTPGVAELAFDDVELPADALIGEEGKGLSYLMHGLNAGRLAIAGTSLGMGEMALEEA 250

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YAR R   GG L D   ++  +AD+A ++ AA  L    A  +D  +         R 
Sbjct: 251 RLYARERPAFGGKLSDFQAVQHMLADMATEMRAARLLMLDAAWRYDRGEVS-------RS 303

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  + K +C + A   +  A++  GG+GY+  + + R YR+     I  G+       + 
Sbjct: 304 LCAMAKLFCSEAAGRTVDTALQIFGGAGYVRGQRVERLYRDVRVTRIYEGASEIQKNTIA 363

Query: 456 NLLEK 460
             + +
Sbjct: 364 REMLR 368


>gi|218777918|ref|YP_002429236.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759302|gb|ACL01768.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 387

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 136/376 (36%), Gaps = 32/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  ++WD   + P    +L+     G   ++    +        A  I    +   +   
Sbjct: 26  PNADQWDADHYLP-IKEVLKPMGELGFFGAVVPEEYGGEGMGWLAASIITEEIARASSSL 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +    +  A  +    T    K +  K+              +     G G+TE   
Sbjct: 85  RVQINLLGLGCAYPIYKYGTEEAKKKYVEKLC-------------RAQYLGGFGITEPNA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           G+D+ AI ++   + D         W  ++  +D  I+ A  +       +   + +  +
Sbjct: 132 GSDVLAIETEATDMGDHYVLNGSKTWISNAHQADVIIIYAYTDKSAKTKGLSAFIVEPRN 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDS 320
            NG+    L NK+G+ S+ T EL F NT        N+   P +  +I+        L +
Sbjct: 192 FNGIKTTDL-NKMGSHSSPTGELFFDNTRVP---KENLLGKPGDGARIVFSSLANTRLSA 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   +  L  A  Y  +R   G  +    + +  IA +  +I AA  L ++ +   
Sbjct: 248 AAGAVGCAQACLDIATKYITKREQFGKSVGTFQMNQDLIAQMTTEIEAARLLVYKASWQK 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+    +       +     KY+  + A       M  +G  GY  E  +AR+YR+ P  
Sbjct: 308 DQGMENN------GMAVAQAKYFAGETAMKCANYGMRLMGAYGYSTEYPLARYYRDIPTY 361

Query: 441 SILLGSGNAMVLDVLN 456
            ++ GS N   + +  
Sbjct: 362 VLVEGSANICKMIIAM 377


>gi|261419890|ref|YP_003253572.1| butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61]
 gi|319766705|ref|YP_004132206.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52]
 gi|261376347|gb|ACX79090.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61]
 gi|317111571|gb|ADU94063.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52]
          Length = 392

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 122/375 (32%), Gaps = 39/375 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +        H ++A  L    ++    +      SA  + 
Sbjct: 48  KELQLKAKEAGFWGINTPEEYGGANL--GHVMQAIVLM---EVSKTLVPFQFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K +               P           +TE   G+D   I     K  D
Sbjct: 103 YYANEEQKKKYLI-------------PTINGEKKSCFAMTEPGAGSDTRNIKMTAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K F++    +D  +++A  +        G   V   + D            +
Sbjct: 150 E-WVLNGEKTFITGGNDADFVMVIAITDKERHQASNGREGVTCFIVDREMG--WRSEPIH 206

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G   +    L F N        LG+L+       +            +V      L  
Sbjct: 207 TMG--PSTPASLIFENVRVPEENILGELHHGYKLGLEWIGYARWVVGARAVGAAERLLQM 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  + ++  ++  IAD A++I AA  L    A + D+ +         R
Sbjct: 265 AIDYAKERVTFGKPIAERQAIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------R 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +A + K +   M   V+   M+  GG GY +E  I R YRE+    I  G+     L +
Sbjct: 318 HLASMAKLFGANMGNRVVDRVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLII 377

Query: 455 LNLLEKGTNLFEQLF 469
              L KG     Q  
Sbjct: 378 ARNLIKGHVKLGQFI 392


>gi|41407011|ref|NP_959847.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395362|gb|AAS03230.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A  
Sbjct: 114 PTLAGEKIGSLAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAAGVSLLVVEKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       ++               K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRNVVERQLAGETN------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR+     I  G+   ++     LL
Sbjct: 347 ESEVERQYRDMRILGIGGGTTEILIALSAKLL 378


>gi|331009693|gb|EGH89749.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 600

 Score =  232 bits (593), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 98/505 (19%), Positives = 178/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAPFQAANVGTTAYPFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +      + G   +  LR  +  L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQGYDSLHELRQPLEQLVAHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|239979564|ref|ZP_04702088.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 381

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 132/364 (36%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
                +    G+        F     +   ++   +     A +  G            +
Sbjct: 36  REFYHKLGELGIFGIEVPEEFGGAGEESFKYQAIISEECARAGVSFGGSGVHVALCLPYL 95

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K W P   +              +    + +TE   G+D+A + +  +  +
Sbjct: 96  KAYATEDQKKRWLPDFVTG-------------TTMYAIAMTEPGTGSDLAGMKTTAKLSA 142

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           DG  Y L+G K F++  + +D  I+ A+          F +   + D +  G    R  +
Sbjct: 143 DGSHYVLNGAKTFITGGVHADRVIVCARTAAPTPEDRRFGISLFVVDTTSEGYAVGRKLD 202

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R++ T EL F++       LLG+ N     +        L  A+ + +    ++  
Sbjct: 203 KLGLRTSDTAELSFTDVKVPVEDLLGEENKGFAYLGQNLPQERLGIAVGAYAQAAAAIRF 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +          
Sbjct: 263 AKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAEAVCDRALEAHDAGELS-------A 315

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A   K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M + +
Sbjct: 316 AEAASAKLFCTEVASRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKMII 375

Query: 455 LNLL 458
              +
Sbjct: 376 AKNM 379


>gi|242025662|ref|XP_002433243.1| Very-long-chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
 gi|212518784|gb|EEB20505.1| Very-long-chain specific acyl-CoA dehydrogenase, putative
           [Pediculus humanus corporis]
          Length = 598

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 137/340 (40%), Gaps = 38/340 (11%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +        + L  TP   K + P++                       LTE   G+
Sbjct: 123 CLGAHQSIGFKGILLFGTPEQKKKYLPRV-------------STGKEYAAFCLTEPTAGS 169

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGRVGCFLVPRLL 262
           D A+I S+     DG  + L+G K ++S+   ++   + AQ      E  V    V   +
Sbjct: 170 DAASIKSRAVLSPDGSHWILNGSKIWISNGGFAEIMTVFAQTTVKNEETGVEKDAVTAFI 229

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSA 321
            + S  G+     + K+G +++ T E+ + N     +   NV  G     K+ +  L++ 
Sbjct: 230 VERSFGGVTSGPPEKKMGIKASNTTEVFYDNVK---IPKENVLGGVGNGFKVAMQILNNG 286

Query: 322 IMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                      MR + A+A+ +A +R   G  +     ++  +A +A+      +L++ +
Sbjct: 287 RFGMASALAGTMRSATAKAVEFATQRLQFGQKIEKYATIQEKLAKMAMLQYVTESLAYMI 346

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           + + D+  +        ++ A I+K +  + A  V  EA++ +GG G++    + +  R+
Sbjct: 347 SGNMDQGSTD------YQVEAAISKCFASESAWTVTDEAIQIMGGMGFMRHSGLEKVLRD 400

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
                I  G+ + + L V      G    E+    L++++
Sbjct: 401 LRIFRIFEGTNDILRLFVA---LNGIQYLEKSLRQLQKEV 437


>gi|225712290|gb|ACO11991.1| Long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
           [Lepeophtheirus salmonis]
          Length = 413

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 127/365 (34%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             + +     GL       ++         A  I   ++Y      A  + S  V     
Sbjct: 71  KEIWKEFGDMGLLGVGISSEKGGFDGSFTDASIIHEEQIYCNCTAPAVLIHSGIVM--PY 128

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + + P             PM    +   LG+TE   G+D+  I +  +  
Sbjct: 129 IANYGTKEQIERYMP-------------PMVAGELIGALGMTEPGAGSDLQGIRTSAKAD 175

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            D    L+G K F+++ + +D  I++A  +   R     +   L      G        K
Sbjct: 176 GDDF-ILNGSKVFITNGIVADLCIVVAVTDPNARSKAHGLSLFLVPSDAPGYSKGCNLKK 234

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG  +  T EL F +       LLG  N     + +      L  A+++ +       E 
Sbjct: 235 IGCHNQDTAELFFEDVRLPKSALLGKFNGGFYHLMEELPQERLGIAVIAAAHAEWMYEET 294

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y  +R   G  L   P ++  +A++   IA   A         DE     E     + 
Sbjct: 295 KDYINQRQAFGKSLSHLPTVRFKMAELKTKIAVMRAFV-------DECLIMHEHKKCNQE 347

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           MA + KY    +   V  E ++  GG GY+ E  IAR + +S    I  GS   M   + 
Sbjct: 348 MASMAKYAATDLENEVATECVQLHGGWGYMYETPIARAFIDSRVQPIYGGSNEIMKELIS 407

Query: 456 NLLEK 460
             + K
Sbjct: 408 RSVIK 412


>gi|91787553|ref|YP_548505.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91696778|gb|ABE43607.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 398

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 133/371 (35%), Gaps = 33/371 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++  +   G   S  +      +   ++ + A  +  +       +   S      + 
Sbjct: 51  REIMNEAGAMGFLGSTIEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPIH 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D A++ ++ + +  
Sbjct: 111 AYGSEAQRQKYLPKLATGEW-------------VGCFGLTEPNHGSDPASMLTRAKPVDG 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKI 279
           G        W  +SP++D F++ A++E   G       +   L +    GL   +++ K+
Sbjct: 158 GFILKGSKMWITNSPIADVFVVWAKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKM 217

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
             R++ T E+   + F      L   +G          L+ A   ++   +  AE     
Sbjct: 218 SLRASITGEIVMDDVFVPEANLLPNVSGLKGPFG---CLNKARYGIAWGALGAAEDCWFR 274

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +I        R+    DE K+  E      
Sbjct: 275 ARQYTMDRQQFGRPLAQNQLIQKKLADMQTEITLGLQACLRVGRLMDEDKAMPE------ 328

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  +  +   A +  GG+G  +E  + RH       +   G+ +   L +
Sbjct: 329 -MISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIRHMINLETVNTYEGTHDVHAL-I 386

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 387 LGRAQTGLQAF 397


>gi|330806831|ref|YP_004351293.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327374939|gb|AEA66289.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 393

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A+        L A+          +  PA    +      GL  +    
Sbjct: 23  ERMIRDTAEQFAQQ-KLAPRVLEAFR-------HEKTDPAIFREMG---EIGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARKVEGGYSLTGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++  + +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWGKDDAGD----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|207744057|ref|YP_002260449.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|206595459|emb|CAQ62386.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 397

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGALGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 114 EFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLTGAKMWITNSPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+   + F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 221 SITGEIVLDDVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 VLNRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGIQAF 396


>gi|149376537|ref|ZP_01894298.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149359204|gb|EDM47667.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 374

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 143/374 (38%), Gaps = 30/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +  P     L       L    +D S          +           LE 
Sbjct: 24  PHAADVDEKKRFPE--EALAAFKELQLIALPFDESIGGQSGDVLAQC--------ICLEE 73

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  + +   MV       +    +P++           P    +    + LTE  GG
Sbjct: 74  IARVCATSSLTLMVIWAGLGPIASFGSPQLI-----EEVMEPAINGNTVASICLTEIHGG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+    ++ Q   DG + L+G K ++++   SD + +LA+       F V       S 
Sbjct: 129 SDVWGARTRAQYK-DGQWVLNGQKRYITNASRSDWYSVLART--GENSFGV--FAVHKSD 183

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL + +L++K+G R + T ++ F         LLGD       + D            +
Sbjct: 184 PGLSFGKLESKMGVRGSPTADVIFEECRVDDYRLLGDSKEGRQYITDSLAYTRPLIGAQA 243

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + +L  AI Y + R V G  +    +++  I D+A +I A+  L +R   + +  +
Sbjct: 244 LGIAQGALDAAIKYVKEREVFGQQVARFQMIRGTIGDLATEIEASRQLLYRSCEAVENKE 303

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   AR +A + K +C  +A  V  E+++  GG+GY+ +  + R  R++    I  
Sbjct: 304 PE------ARTLASMAKLFCSNVAMKVATESVQLHGGAGYLTDFPVERMMRDAKITQIYE 357

Query: 445 GSGNAMVLDVLNLL 458
           G+     L V   +
Sbjct: 358 GTSEIQKLIVAKAM 371


>gi|296393370|ref|YP_003658254.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296180517|gb|ADG97423.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 381

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 128/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L   +  +G         +      +  +  +  +  +A+     +            
Sbjct: 40  RGLWLEAGKNGFLGMSVPARYGGGDGAEDFRFNSVIVEEIARSGCSGIGFSLHNDIVQPY 99

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           LM   T    + W P   S E                 + +TE   G+D+  I +   + 
Sbjct: 100 LMSLATEEQKQRWLPGFCSGEM-------------ITAIAMTEPGTGSDLQGIQTNAVRK 146

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + L+G K F+++ + +D  I++AQ E   G   +     +    G    R  +KIG
Sbjct: 147 GDD-WLLNGAKTFITNGVNADLVIVVAQTEPGSGAKGLTLFAVERGMAGFERGRKLDKIG 205

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIH 337
            R+  T EL F +        L  V       M+ L    L  A+ +   + +S+   + 
Sbjct: 206 LRAQDTAELVFQDVVVPQENVLGEVGQAFAYLMQNLAQERLSIAVAAAITIELSIEMTVE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +      +  +A+++ + AA  AL        D +         +   A
Sbjct: 266 YVKNRKAFGKPIGKFQNTRFVLAELSAEAAAVRALV-------DRSIEFHLRGELSIPDA 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  +    V+   ++  GG GY+ E  IA+ Y +S   +I  G+   M   +   
Sbjct: 319 AIAKLYSTERQVHVVDRCLQLHGGYGYMLEYPIAQAYVDSRIQTIYGGTSEVMKEIIGRS 378

Query: 458 L 458
           +
Sbjct: 379 M 379


>gi|291451433|ref|ZP_06590823.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291354382|gb|EFE81284.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 385

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 132/364 (36%), Gaps = 29/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
                +    G+        F     +   ++   +     A +  G            +
Sbjct: 40  REFYHKLGELGIFGIEVPEEFGGAGEESFKYQAIISEECARAGVSFGGSGVHVALCLPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K W P   +              +    + +TE   G+D+A + +  +  +
Sbjct: 100 KAYATEDQKKRWLPDFVTG-------------TTMYAIAMTEPGTGSDLAGMKTTAKLSA 146

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           DG  Y L+G K F++  + +D  I+ A+          F +   + D +  G    R  +
Sbjct: 147 DGSHYVLNGAKTFITGGVHADRVIVCARTAAPTPEDRRFGISLFVVDTTSEGYAVGRKLD 206

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R++ T EL F++       LLG+ N     +        L  A+ + +    ++  
Sbjct: 207 KLGLRTSDTAELSFTDVKVPVEDLLGEENKGFAYLGQNLPQERLGIAVGAYAQAAAAIRF 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y + R V G  +      K  +A    ++ AA A+  R   + D  +          
Sbjct: 267 AKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAEAVCDRALEAHDAGELS-------A 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A   K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M + +
Sbjct: 320 AEAASAKLFCTEVASRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKMII 379

Query: 455 LNLL 458
              +
Sbjct: 380 AKNM 383


>gi|229489257|ref|ZP_04383123.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324761|gb|EEN90516.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 385

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 132/376 (35%), Gaps = 31/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
           E+W++    P      RR    G+        +     K     +  A     A    G 
Sbjct: 30  EKWEEDGHPP--RDFYRRLGELGVLGIQVPEEYGGGGEKSLKFNVVVAEEVAAAGASFGS 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +           W P   S               +   + +TE   G+D
Sbjct: 88  QSVHTNLILPYLLEYANEEQKSRWLPGFASG-------------DLMFAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF---LVPRLLEDG 265
           +A I +  +   DG  Y ++G K F++  + +D  +++ +            +  L+ D 
Sbjct: 135 LANIATTAKLSEDGTHYVVNGSKTFITGGVLADRVLVVCRTAPSTAENRRTGLSILVIDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           S  G    R  NKIG +++ T EL F +    +   LG+       +        L  A 
Sbjct: 195 SSPGYSVGRKINKIGLKTSDTAELSFVDVKVPVEDRLGEEGDGFSYLTHNLAQERLTIAF 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + +    +L  AI Y + R V G  +      K  +A+ A ++ A   +S       D 
Sbjct: 255 GAAATASAALRFAIDYVKDRKVFGKPVAAFQNTKFVLAECATEVDAIQLVSDNALECHDR 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++    I
Sbjct: 315 GTLTIPDAAKA-------KLFCTEAAGRVIDKCLQLHGGYGYITEYPIARLYADTRVTRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 368 YGGTSEVMKTIIAKDL 383


>gi|124009420|ref|ZP_01694097.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Microscilla marina ATCC 23134]
 gi|123984968|gb|EAY24926.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Microscilla marina ATCC 23134]
          Length = 604

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 93/468 (19%), Positives = 174/468 (37%), Gaps = 58/468 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV  HP     ++     G     +          Q     +  +   A          +
Sbjct: 71  KVTIHPEIIKYIKAMGEAGFIGGSFSFEHGGQQLPQMVTAASGAIMSAANNGVVMFTGLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             SA ++A   +  + + +  K+ S E+  T             + LTE + G+ ++ I 
Sbjct: 131 AGSAHLIASFGSKELKEKYTGKMLSSEWQGT-------------MALTEPQAGSSLSDIV 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           S       G Y L G K F+SS   +       +MLA+++G       +  F+VP+L ED
Sbjct: 178 SSATPTDQGHYKLKGQKIFISSGDYEGTENVVHLMLARIDGAPLGTKGISLFVVPKLRED 237

Query: 265 GS----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIY 317
            +     N +    + +K+G +S   V        N  G+L+G+ N     +  M     
Sbjct: 238 ENGNLIDNDVTTAGVYHKMGQKSTPAVHYIAGDNDNCHGWLVGEPNKGLSYMFQMMNEAR 297

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALD 365
           L   +M  +    +   ++ YA  R     I            +I+   +KR +      
Sbjct: 298 LGVGLMGAAIASAAYYASLEYANERPQGRKISEQSAKDKPQTFIINHADVKRMLLFQKSV 357

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           +    +L F  +   D   +  +E A         ++ P+ K +  +     ++E M+C+
Sbjct: 358 VEGGLSLIFECSRYADLEMTTEDETARKRYKGLLDLLTPVAKTFPAEYGIKSVSEGMQCL 417

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLG 477
           GG GY  +  + +HYR+    SI  G+     LD+L   ++  G      L   +++   
Sbjct: 418 GGFGYTTDFPLEQHYRDIRITSIYEGTTGIQSLDLLARKIMGTGGKSLMLLAEEVKKVTD 477

Query: 478 -----SSGKKVITILRDSISLCK--EDKGLARFLTEKIALASSAAALY 518
                   KK +T L++ +   +    +     +  K+ LA + A LY
Sbjct: 478 EASTYDDLKKYVTALQEKLQDLQKVTQQLGGMAMQGKMELALADATLY 525


>gi|88706259|ref|ZP_01103965.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88699410|gb|EAQ96523.1| glutaryl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 395

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 130/360 (36%), Gaps = 38/360 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + R     GL  +  D    P V   ++ + A  +  +       L   S      +  
Sbjct: 58  EIFREMGELGLLGATIDGYGCPGVDYTSYGLIAREVERVDSGYRSMLSVQSSLVMYPIYT 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PK+ + E+                 GLTE   G+D   + ++ + +  G
Sbjct: 118 YGTEEQREKYLPKLATGEW-------------IGCFGLTEPDYGSDPGGMVTRARSVDGG 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D F++ A+ +      L+   + +   +GL   +++ K+  R++
Sbjct: 165 YRISGAKMWISNSPVADVFVVWAKTDDG----LIRGFILEKGMDGLSAPKIEGKLALRAS 220

Query: 285 ATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR- 340
            T E+     F     LL  ++   GP         L++A   ++   +  AE   +A  
Sbjct: 221 ITGEIVMDEVFVAEEQLLPKVHGLKGP------FGCLNNARYGIAWGALGAAETCWHAAL 274

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R   G  L    +++  +AD+  +IA       R     D         A +  +
Sbjct: 275 DYTLERKQFGKPLAANQLVQLKLADMQTEIALGLQGCARAGQLMDAG-------AVSPDL 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +  +A + +GG+G  ++  + RH       +   G+ +   L +  
Sbjct: 328 ISLIKRNSCGKALHIARQARDMLGGNGISDDYPVMRHMMNLEVVNTYEGTHDIHALILGR 387


>gi|84685154|ref|ZP_01013053.1| glutaryl Co-A dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666886|gb|EAQ13357.1| glutaryl Co-A dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 397

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 132/378 (34%), Gaps = 40/378 (10%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
             PA  A +  +   GL       ++  V          AR           +MS  S  
Sbjct: 53  TDPAIFAEMGAA---GLLGVTVSDAYGGVGAGYVSYGLVAREVERIDSGYRSMMSVQSSL 109

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ S E+                 GLTE   G+D A + ++
Sbjct: 110 VMYPIEAYGSEAQKQKYLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTR 156

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K   G        W  +SP++D F++ A+ E   G   V   + +    GL   +++ 
Sbjct: 157 AKKTDGGYVLNGSKMWISNSPIADVFVVWAKSEAHDGK--VRGFVLEKGMKGLSAPKIEG 214

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAE-- 334
           K+  R++ T E+   +         +     V  M      L+ A   +S   +  AE  
Sbjct: 215 KLSLRASITGEIVMEDVEV----GEDALLPNVSGMSGPFGCLNRARYGISWGAMGAAEDC 270

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  Y   R      L    + ++ +AD+  +IA     + R+    D  K       
Sbjct: 271 WFRAHAYGMERKQFDRPLAATQLYQKKLADMQTEIALGLQGALRVGRLMDAGK------- 323

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           +A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   
Sbjct: 324 FAPEMISIVKRNNCGKALDIARQARDMHGGNGISSEYHVMRHAQNLETVNTYEGTHDVHA 383

Query: 452 LDVLNLLEKGTNLFEQLF 469
           L    +L +G    +  F
Sbjct: 384 L----ILGRGQTGLQAFF 397


>gi|332662461|ref|YP_004445249.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331275|gb|AEE48376.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 604

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 90/521 (17%), Positives = 198/521 (38%), Gaps = 76/521 (14%)

Query: 64  YVLSCTAQELARMA----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            + S  A+++   A    +   P+L      G+    V+ H + H  ++     GL  + 
Sbjct: 43  DMASDIARQIMAPAFTESDRKQPELE----NGQ----VKVHSSIHEFIKTFSEAGLMSAP 94

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPK 177
           +   +  +   +   I AA  ++M       +M   +T  +A+++     P     + PK
Sbjct: 95  FSEEWGGIQLPK--VIAAAAEFIMGSAHNSMVMYTDLTKGAANLIYTFGNPEQKAAFLPK 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+  T             + LTE + G+ ++ + +     +DG Y + G K F+S+
Sbjct: 153 MLSGEWMGT-------------MCLTEVQAGSSLSDVATAASPQADGTYLIKGQKIFISA 199

Query: 238 PMSDA-----FIMLAQVEGR-VGCFLVPRLLEDG---------SPNGLCYQRLKNKIGNR 282
              D       ++LA+++G   G   +   +             PN +    + +K+G +
Sbjct: 200 GDQDVTDNIVHLVLARIDGAPKGTKGISLFIVPKKRINSAGTLEPNDVDSIGIYHKMGQK 259

Query: 283 SNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +   + LEF    +  G+LLG++N     +  M     L   +  +     +   A+ YA
Sbjct: 260 ATPAMHLEFGGKNDCVGYLLGEINRGLPQMFLMMNAARLGVGMGGIHIASAAYYAALQYA 319

Query: 340 RRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + R     +           +I  P ++R +      +    +L  +     D  K  ++
Sbjct: 320 QERPQGRRLNEKQALVEPVCIIQHPDVRRMLFLQKAIVEGGLSLILQCYQYLDLEKVHAD 379

Query: 389 EAA-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +            ++ P+ K +  +M    + + ++ +GG GY E+  + +  R+    S
Sbjct: 380 QPEVKQHYNQLLELLTPVAKTYGAEMGFVAVNQGLQVLGGYGYTEDFPLEQLARDVRIMS 439

Query: 442 ILLGSGNAMVLDVLNLLEKGTN------LFEQLFSTL-EQDLGSSGKKVITILRDSISLC 494
           +  G+       +L     G         FE++  T+ E +  +S       L  ++   
Sbjct: 440 LYEGTTGIQAQALLGRQVVGNQGKSLVKWFEEVAKTVHEAENSASLSTYWNDLMSAMRNF 499

Query: 495 KE--DKGLARFLTEKIALASSAAALY--RAGMNDIADVFLE 531
           +E  ++         + +  + A LY    G+ ++A  +L+
Sbjct: 500 QEVTNQQFKNAAHGDMEVLLADANLYMEAFGILNVAWQWLQ 540


>gi|330970202|gb|EGH70268.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 393

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ +++  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARRVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 LARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|262371624|ref|ZP_06064903.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262311649|gb|EEY92734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 386

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 144/398 (36%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P    W+     P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPFIP---EWEAAGRFP-IHDVFKKMADLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +       S+E  
Sbjct: 60  GLGLDYSYNLVVAE-------ELGRAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P  +      + ++E   G+D+AA+ +  +K  D         W  +S  +D F 
Sbjct: 108 EEFLNPAIRGEYVASIAVSEVHAGSDVAAVKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++      G+ +    NK+G RS  T ++ F N        +  
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVPQRNLVGA 227

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             + +   +V G+   + + I YA+ R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERMWACANAVGGLENVIQQTIDYAKERTTFGQPLINNQYVHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        ++         ++A + K    ++   V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEN-------VTMLASMAKLKSGRLTREVADTCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|255320472|ref|ZP_05361653.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378367|ref|ZP_06071524.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
 gi|255302444|gb|EET81680.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299652|gb|EEY87564.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164]
          Length = 407

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 137/380 (36%), Gaps = 40/380 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
             +  PA    +      GL        +        ++ + A  +  +           
Sbjct: 56  HEKTDPAIFREMG---ELGLLGPTIPEQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E+                 GLTE   G+D  ++
Sbjct: 113 SSLVMVPINEFGSEEQKQKYLPKLATGEF-------------IGCFGLTEPDHGSDPGSM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLC 271
           +++ +K+  G        W  +SP++D F++ A+    +G VG   +   + +    GL 
Sbjct: 160 STRAKKVEGGYRLSGAKMWITNSPIADVFVVWAKEVSTDGNVGP--IRGFILEKGWEGLS 217

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
              +  K+G R++ T E+   N F         +   V+ ++     L+SA   ++   +
Sbjct: 218 APAIHGKVGLRASITGEIVMDNVFVPEEN----AFPEVQGLRGPFTCLNSARYGIAWGAM 273

Query: 331 SLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE        Y   R   G  L    ++++ +AD+  +IA    ++ R     DE  +
Sbjct: 274 GAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIA 333

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E          + K   C  A  +   A + +GG+G  +E  +ARH       +   G
Sbjct: 334 SVE-------GTSLIKRNNCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEG 386

Query: 446 SGNAMVLDVLNLLEKGTNLF 465
           + +   L +L   + G   F
Sbjct: 387 THDVHAL-ILGRAQTGIAAF 405


>gi|296169727|ref|ZP_06851344.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895624|gb|EFG75321.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 382

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 135/366 (36%), Gaps = 25/366 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W++V   P    L RR+   GL  + +  +        A  +        A    
Sbjct: 26  PHADEWERVGELP--RELHRRAGDAGLLGAGFPEAVGGGGGDGADAVIICEEVHQAGA-- 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                  V ++     +  P +     P++      PT        +    L +TE  GG
Sbjct: 82  ----PGGVFASLFTCGIAVPHMIASGDPRLIEEFVRPTL-----AGNKIGALAITEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +      D  Y ++G K +++S +   +++ A   G  G   V  L+ +    
Sbjct: 133 SDVGHLRTTAVLDGDH-YVVNGAKTYITSGVRADYVVTAVRTGGPGAAGVSLLVVEKGTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   K+G RS+ T EL F +       L+G  N     +    +   +  A  + 
Sbjct: 192 GFEVSRKLAKMGWRSSDTAELSFVDARVPAANLVGPENSGFLQIAQAFVSERIGLAAQAY 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           S  +  L   + + R R   G  LI +  ++  +A++A  I  A   S  +       ++
Sbjct: 252 SSAQRCLDLTLQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRNVVERQLAGET 311

Query: 386 RS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I  
Sbjct: 312 NLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGIGG 364

Query: 445 GSGNAM 450
           G+   +
Sbjct: 365 GTTEIL 370


>gi|120556229|ref|YP_960580.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326078|gb|ABM20393.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8]
          Length = 393

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 129/370 (34%), Gaps = 40/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 54  EIFRGMGETGLLGCTIPEQYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + PK+ S E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 114 EFGNEETRQKYLPKLASGEW-------------IGCFGLTEPNHGSDPGSMITRARKVEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 161 GYRLTGSKMWITNSPIADVFVVWAKDDDGA----IRGFVLEKGWEGLSAPAIHGKVGLRA 216

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+     F        ++    GP         L+SA   +S   +  AE   +  
Sbjct: 217 SITGEIVMDGVFVPEENAFPNVRGLKGP------FTCLNSARYGISWGALGAAEDCWHTA 270

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R   G  L    ++++ +AD+  +I+ A     RL    DE  +       A  
Sbjct: 271 RQYVLDRQQFGRPLAANQLIQKKLADMQTEISLALQGCLRLGRMKDEGTA-------AVE 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I K   C  A  V   A + +GG+G  +E  +ARH       +   G+ +   L +L
Sbjct: 324 ITSIMKRNSCGKALDVARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-IL 382

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 383 GRAQTGIQAF 392


>gi|330984630|gb|EGH82733.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 600

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 95/505 (18%), Positives = 176/505 (34%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAVDAFL----AAGFLNASRDFEAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQAANVGTTAYPFLTMGAANLIESFGNDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHALSENIVHMVLAKL 216

Query: 250 EGRVG------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
               G       F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR R   G         
Sbjct: 277 GYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSLDYARDRPQ-GRLPDSKSPE 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMA 397
                +I    ++R +      +  A  L    +  FD+ ++   E A         ++ 
Sbjct: 336 STPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDARKHAHELLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           P+ K W  +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA---- 509
            L + G    +QL   +    +       +  + +    L    + +   L   +A    
Sbjct: 456 KLAQNGGTGLKQLLRLISDTCERAQVYDSLHELRQPLEQLVTHVQAVTLGLLTDLAQGRI 515

Query: 510 ---LASSAAALYRAGMNDIADVFLE 531
              LA+SA  L   G   I   +LE
Sbjct: 516 TSTLANSALYLKVFGHTIIGWRWLE 540


>gi|262203444|ref|YP_003274652.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086791|gb|ACY22759.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 591

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 99/548 (18%), Positives = 195/548 (35%), Gaps = 82/548 (14%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
             F     +  + + E       +  A   +  + N P +   G        V       
Sbjct: 27  ERFAEHSRETFDAVLELSADLAVKRFAPANKAGDQNEPYVGDDGR-------VVLPAEIG 79

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           A +      GL    +D     +         ++  +  A          +V +A+++A 
Sbjct: 80  AGIDEFRKAGLLAGSFDADLGGMQLPTVVSRASSAWFQAANAAMSSYAFLTVGNANLLAT 139

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP     W   +    +  T             + L+E + G+ +A IT++     DG
Sbjct: 140 YGTPEQIDTWVRPVVEGRFFGT-------------MCLSEPQAGSSLADITTKAVPADDG 186

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQ 273
            Y ++G K ++S+   +       ++LA+  G       +  F+VP+ L DG+ N +   
Sbjct: 187 TYRITGTKMWISAGEHELTENIVHLVLAKAPGGGPGVKGISLFVVPKYLADGTRNDVALV 246

Query: 274 RLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            L +K+GNR+     L F +            G+L+G+ +     +  M     +    +
Sbjct: 247 GLNHKMGNRATTNTLLNFGDGTHSPTTVPGAVGYLVGEEHKGLSYMFHMMNEARIGVGFL 306

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATAL 372
           + +        ++ YAR R                 +I+   +KR +      +  A AL
Sbjct: 307 ATALGYAGYQASLEYARVRTQGRPITAKDPSSKPVPIIEHADVKRMLLAQKSYVEGALAL 366

Query: 373 SFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               +   D     +   R+       ++ PI K W  +      + A++  GG GY +E
Sbjct: 367 GLYCSKLVDIEATTDGDERARTTLLLDVLTPIAKSWPSQWCLEANSLAIQVHGGYGYTKE 426

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
             + ++YR++  N I  G+     LD+L    K      +  + L + +G++ ++     
Sbjct: 427 FDVEQYYRDNRLNPIHEGTHGIQALDLLG--RKVVMSGGKGLALLAETIGATIERA---- 480

Query: 488 RDSISLCKEDKGLARFLTEKIA---------------LASSAAALYRAGMNDIADVFLEN 532
            +S+    E     R   +++                LA++ A L  AG   +A V+LE 
Sbjct: 481 -ESVEAATEYAAALRTALDRLVAVTAQVWSAGDPAVSLANATAYLEAAGHIVLAWVWLEQ 539

Query: 533 RFLDNCHS 540
               N  +
Sbjct: 540 LLAANGKT 547


>gi|107021888|ref|YP_620215.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116688836|ref|YP_834459.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892077|gb|ABF75242.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116646925|gb|ABK07566.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 395

 Score =  232 bits (593), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 152/433 (35%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   AQ  A+  +   P++       ER D V 
Sbjct: 9   DDPLL----------LDQQLTEE-ERMVRDAAQAYAQ--DKLAPRVTEAFRH-ERTDAVI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIFEFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A++E   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYALSGAKMWITNSPIADVFVVWAKLE-ENGKDAIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     + N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---EENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|207728208|ref|YP_002256602.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206591453|emb|CAQ57065.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 397

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGALGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 114 EFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLTGAKMWITNSPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+   + F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 221 SITGEIVLDDVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 VLDRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKSLDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGIQAF 396


>gi|206561535|ref|YP_002232300.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
           J2315]
 gi|198037577|emb|CAR53514.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia
           J2315]
          Length = 395

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 85/433 (19%), Positives = 151/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   AQ  A+  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTEE-ERMVRDAAQAYAQ--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ S E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIFEFGSDAQKQKYLPKLASGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A++E   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYSLSGAKMWITNSPIADVFVVWAKLE-ENGKDAIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     D N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---DENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|183598020|ref|ZP_02959513.1| hypothetical protein PROSTU_01375 [Providencia stuartii ATCC 25827]
 gi|188022798|gb|EDU60838.1| hypothetical protein PROSTU_01375 [Providencia stuartii ATCC 25827]
          Length = 379

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 129/373 (34%), Gaps = 26/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              +R+D+ E   A    L      G         +                   A    
Sbjct: 26  ANAQRYDETETFCA--ESLAALGEMGCWGINLPEQYGGFGIGSIAMSMIVEAVAAACAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +   + +  T    + W PK  S E                  GLTE   G
Sbjct: 84  SSALTAHFLATDSILIGGTEEQKQYWLPKAASGEM-------------LGAFGLTEPAAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ A + +   + + G        +  ++  +D  ++ A+     G   +   +      
Sbjct: 131 SNPADMRTIATRENGGWRIRGNKHYITNAKEADFIVLYAKTNPEAGARGISAFMIPKGTE 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ +   +  +G R +   EL   N +     LLG+ N       ++     ++ A  S+
Sbjct: 191 GVEFSSPEKTMGLRGSTIYELAL-NCWLPESALLGEENKGFHTAMEVLDKGRVEVAATSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R ++  A+++ + R +    L      +  +AD+   + AA  L++R A   D  + 
Sbjct: 250 GIARAAMECALNWVKERQIGKKPLAAYQGTQWRLADMHTQLEAARMLTWRAAECRDSGER 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S ++A A       K +  + A  V   A++  GG GYI +  + R+ R++    I  G
Sbjct: 310 FSLQSATA-------KLFAAECAGFVTDAALQLHGGYGYIRDLPLERYVRDARILRIFEG 362

Query: 446 SGNAMVLDVLNLL 458
           +     + +   +
Sbjct: 363 TSEIQKIIISRAV 375


>gi|332142140|ref|YP_004427878.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552162|gb|AEA98880.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 600

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 83/503 (16%), Positives = 168/503 (33%), Gaps = 68/503 (13%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           + E +          +A+ N P             KV                G     +
Sbjct: 44  MAEKMAEELFLPHNAVADKNEPTFDG--------SKVSMIDEVKVAFDTYRESGFIAGHF 95

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D     +          A  +L A   +      +  +A+++    +  +   + PK+ +
Sbjct: 96  DFEDGGMQLPVTVMNACAGFFLAANPSSTAYPFLTAAAANVIKHFASSDIKNAFLPKMLT 155

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            ++  T             + LTE   G+ +A I +  +   DG Y + G K ++S    
Sbjct: 156 GDFTGT-------------MALTEPHAGSSLADIRTSAKPQDDGTYRIKGSKIYISGGEH 202

Query: 241 D-----AFIMLAQVEGR------VGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSN 284
           +       ++LA++ G       +  F VP+   D        N +    L +K+G R  
Sbjct: 203 ELSDNIVHLVLAKIPGGPAGVKGISLFAVPKYRLDADGNPDVRNDVTLAGLIHKMGYRGT 262

Query: 285 ATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            +  L F    +  G+L+G+ +     +  M     +     +          ++ YA+ 
Sbjct: 263 TSTALTFGENGDCHGYLIGEPHQGLRYMFMMMNEARIGVGYGAAMIGYRGYRYSLEYAKD 322

Query: 342 RHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAK 384
           R                 +I+   ++R +           +L    +   D      +++
Sbjct: 323 RTQGRAAPNLAPEDDPSPIINHGDVRRMLLAQKAYCEGGMSLCLYGSMLIDKMETETDSE 382

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R+E +    ++ P+ K W  +  P     A++ +GG+GY  E  + + +R++  N I  
Sbjct: 383 KRTELSQLLDLLTPVFKAWPSEFGPKANDLAIQILGGAGYTREYPVEQCWRDNRLNPIHE 442

Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           G+     LD+L   L +      E L S +  D+  +       L   +    +  G   
Sbjct: 443 GTNGIQALDLLGRKLWQHDGKGLEALLSRVTGDMKRAETPRAQTLAAKLKPYLDKLG--- 499

Query: 503 FLTEKIALASSAAALYRAGMNDI 525
                 AL   AA   R+    +
Sbjct: 500 ------ALIQQAATDLRSDKQPV 516


>gi|167576791|ref|ZP_02369665.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
          Length = 383

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 139/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H + R+    G+       +F       ++++      +MA+  
Sbjct: 23  NPYVDEWEEAGIFPA-HDVFRKLGALGMLGLSKPAAFGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +           P         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLTPAIAGEQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  D         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTAARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGHGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R R + G  ++D  V+   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SIAR YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSIARTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|118466232|ref|YP_880904.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254774498|ref|ZP_05216014.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118167519|gb|ABK68416.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 388

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 135/372 (36%), Gaps = 31/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +         + W P + +                  G GLTE   G+D  A
Sbjct: 95  GVSLGAMPIYRFGNEEQKRKWLPDLTAG-------------RALAGFGLTEPGAGSDAGA 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----CFLVPRLLEDGSPNG 269
             +   ++ DG + ++G K F+++  +D   ++               +  ++      G
Sbjct: 142 TRTTA-RLEDGEWVINGSKQFITNSGTDITSLVTVTAVTGTVGADKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
              + + +K+G  ++ T  L FS+        L    TG    + IL    +  A ++  
Sbjct: 201 FTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGYANFLSILDEGRIAIAALATG 260

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  + E++ YA+ R   G  +     +   IA +      A    +  A      K  
Sbjct: 261 AAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPF 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA A+++A        + A     +A +  GG G++ E  +ARHYR+S    I  G+
Sbjct: 321 KKEAAIAKMIA-------SEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGT 373

Query: 447 GNAMVLDVLNLL 458
               ++ +   L
Sbjct: 374 TEVQLMLIARSL 385


>gi|56420189|ref|YP_147507.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56380031|dbj|BAD75939.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 392

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 122/375 (32%), Gaps = 39/375 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +        H ++A  L    ++    +      SA  + 
Sbjct: 48  KELQLKAKEAGFWGINTPEEYGGANL--GHVMQAIVLM---EVSKTLVPFQFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K +               P           +TE   G+D   I     K  D
Sbjct: 103 YYANEEQKKKYLI-------------PTINGEKKSCFAMTEPGAGSDTRNIKMTAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K F++    +D  +++A  +        G   V   + D            +
Sbjct: 150 E-WVLNGEKTFITGGNEADFVMVIAITDKERHQASNGREGVTCFIVDREMG--WRSEPIH 206

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G   +    L F N        LG+L+       +            +V      L  
Sbjct: 207 TMG--PSTPASLIFENVRVPEENILGELHHGYKLGLEWIGYARWVVGARAVGAAERLLQM 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  + ++  ++  IAD A++I AA  L    A + D+ +         R
Sbjct: 265 AIDYAKERVTFGKPIAERQAIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------R 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +A + K +   M   V+   M+  GG GY +E  I R YRE+    I  G+     L +
Sbjct: 318 HLASMAKLFGANMGNRVVDRVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLII 377

Query: 455 LNLLEKGTNLFEQLF 469
              L KG     Q  
Sbjct: 378 ARNLIKGHVKLGQFI 392


>gi|323486813|ref|ZP_08092131.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
 gi|323399826|gb|EGA92206.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163]
          Length = 367

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 131/369 (35%), Gaps = 37/369 (10%)

Query: 68  CTAQELARM-ANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE+AR  A     P    Y   GE        P   ++ + +   G         F 
Sbjct: 28  REIQEMAREFAEAKIRPVSKEYDLKGE-------TPL--SVYKEAAGLGYTSLCIPEEFG 78

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    I  A  +  A       +  S  +   + L  T    +  A  + +     
Sbjct: 79  GAGLGTFANILVAEEFARADAGFSVAVQASTLAMKPILLAGTKEQKQYAADALINGGM-- 136

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFI 244
                           LTE   G+D  AI ++  K  DG Y ++G K F+++ P +D ++
Sbjct: 137 ------------GSFCLTEPDAGSDAGAIRTKAVKK-DGEYIITGRKCFITNAPHADFYV 183

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           + A+ E   G   +   L +    GL   + ++K+G R + T ++            L  
Sbjct: 184 VFAKTEPDAGTKGISAFLVERGREGLSIGKHEDKMGIRLSTTADVILEEVHVPEDHLLGA 243

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M+ L    L+ A M+    + ++  ++ YA+ R   G  +     ++  +AD
Sbjct: 244 EGKGFKLAMQTLDRTRLECAAMAAGLSQRAIDLSVDYAKTRVTFGKPIAKLQAIQFMLAD 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA +L ++ A   D      +       M  + K +  + A     +A++   G
Sbjct: 304 MEIRNQAARSLVYQCAAMIDSGAVDGK-------MNAVAKTFSSEAAMQNTLDAVQIFSG 356

Query: 422 SGYIEERSI 430
            GY  E  +
Sbjct: 357 YGYSREYEV 365


>gi|329896907|ref|ZP_08271760.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328921534|gb|EGG28917.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 390

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 80/357 (22%), Positives = 134/357 (37%), Gaps = 27/357 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMV 162
           L  ++   GL    +   F  +               +A++ AG + +  +        V
Sbjct: 51  LWPKAAEIGLLGMGYPEEFGGIQEGIDVWHSWIVNEELARVGAGGVGASLMVHGIGLPPV 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                P V    APK+ + E               I LG+TE  GG+D+A++ +  ++  
Sbjct: 111 INFARPEVKAAVAPKVLAGEAW-------------ISLGITEPGGGSDVASLQTTARRDG 157

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D  Y +SG K F++  M   ++  A   G  G   V  LL      G     L  K G  
Sbjct: 158 DE-YVVSGSKTFITGGMRANWVSTAVRTGGPGPGGVSMLLIPTDAAGFSRTPLNKKQGWW 216

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T  L F         L+G+ N     +        +  A    +  RV L +A+++A
Sbjct: 217 ASDTATLYFDEVRVPVTNLIGEENQGFKVIMHNFNSERMGMAAQMEAAARVCLEDAVNWA 276

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  L D  V++  I+ +   + A  A         +  +  + + A  ++ A  
Sbjct: 277 RERKTFGKRLADHQVIRHKISAMKQKLNATQAYIRACYEQIEIGQPNAADIALLKVQASE 336

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +C         EAM+ +GG+GY+    + R YRE   N+I  GS   M      
Sbjct: 337 VMEFC-------AREAMQILGGAGYLRGNRVERIYREVRVNAIGGGSEEIMRDLAAR 386


>gi|169634301|ref|YP_001708037.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169794664|ref|YP_001712457.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|184159528|ref|YP_001847867.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213157964|ref|YP_002320762.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215482254|ref|YP_002324436.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|239504119|ref|ZP_04663429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB900]
 gi|301345859|ref|ZP_07226600.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301511362|ref|ZP_07236599.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596586|ref|ZP_07241594.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332851547|ref|ZP_08433524.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332867746|ref|ZP_08437818.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332873481|ref|ZP_08441432.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|169147591|emb|CAM85452.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|169153093|emb|CAP02163.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
 gi|183211122|gb|ACC58520.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|213057124|gb|ACJ42026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213987120|gb|ACJ57419.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|322509438|gb|ADX04892.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323519459|gb|ADX93840.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729892|gb|EGJ61224.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733752|gb|EGJ64904.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332738306|gb|EGJ69182.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 385

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+   P    W++    P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPNIP---EWEEAGRFP-IHDVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGRAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +  ++       +A + K    +++  V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLSREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|330961365|gb|EGH61625.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 393

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   ++   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|83717376|ref|YP_438490.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|167614960|ref|ZP_02383595.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
 gi|257141540|ref|ZP_05589802.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83651201|gb|ABC35265.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 383

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 140/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H + R+    G+       +F       ++++      +MA+  
Sbjct: 23  NPYVDEWEEAGIFPA-HDVFRKLGALGMLGLSKPAAFGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +          AP         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLAPAIAGEQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  D         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTAARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGHGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R R + G  ++D  V+   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SIAR YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSIARTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|84501855|ref|ZP_01000013.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389850|gb|EAQ02484.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 373

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 130/385 (33%), Gaps = 28/385 (7%)

Query: 92  ERWDKVEFHP--------AWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-L 140
           +R  +   HP         W    L ++    GL             + +  +   +  +
Sbjct: 2   DRVSREVLHPLQARMDDEEWWPDDLFKQMGGLGLLGITAPEELGGSGQNEFTQALVSEVI 61

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                       +      + +    +    K + P + S E             +   L
Sbjct: 62  SKWNPAVGLSHGAHDNLCLNNLLRNGSEEHVKKYVPGLCSGE-------------LVGAL 108

Query: 201 GLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           GLTE   G+D + ++ +  ++  D         +  + P++D  ++ A+ +   G   + 
Sbjct: 109 GLTEPGAGSDALGSMATTARRDGDDYVINGSKIYITNGPIADVILLYAKTDKSKGAKGIS 168

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             + +    G    +  +K+G R + T EL F +       ++G  N     V     L 
Sbjct: 169 AFIIETDNPGFKVAQKLDKMGFRGSPTGELVFEDCRVPASAMVGQENTGVSVVMSGLDLE 228

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A + V     +L   + YA+ R   G  +    +M+  +A+I  ++  A A S+R 
Sbjct: 229 RAMVASVCVGMAERALELGLEYAKIREQFGRPISSFQMMQSKLAEIYTEVETARAFSYRA 288

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +       +        +      +  +     + EA    GGSGY+++  I R YR 
Sbjct: 289 LAACTGLPKGAGGRGEIHKLTAAACLYAGEAFNKAVTEACHIHGGSGYMQDTEINRLYRA 348

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
           +    I  G+     + +   L + 
Sbjct: 349 NKLLEIGAGTSEVRKIIIAEELLRA 373


>gi|229488597|ref|ZP_04382463.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229324101|gb|EEN89856.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 142/379 (37%), Gaps = 38/379 (10%)

Query: 97  VEFHPAWHA-------LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V   P W         L R+    G+        +     + + K +A      A+    
Sbjct: 26  VPHFPEWEEAGMVPRSLYRQLGDLGIFGIELPEEYGG-GGEASFKYQAVIREETARAGVT 84

Query: 150 HLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  T   +  L           W P   S E             +   + +TE   
Sbjct: 85  FGADVVHTCLVLPYLVEYGNDEQKARWLPGFLSGE-------------LMTAIAMTEPGA 131

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRV---GCFLVPRLL 262
           G+D+A I +  +  SDG  Y L+G K F++  + +D  +++A+            +  L 
Sbjct: 132 GSDLAGIKTTARLSSDGSHYVLNGSKTFITGGVQADLILVVARTSPPSEVNRRAGLSILC 191

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            D + +G    R   K+G R+  T EL F++       LLG+     G +    +   L 
Sbjct: 192 VDTTSDGFGVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGYLTRNLVRERLG 251

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A+ S +    ++     Y + R V G  +      K  +A+ + ++AAA A   R  + 
Sbjct: 252 AAVGSYANASAAIEFTTEYVKEREVFGAPVAQFQNTKFVLAECSAEVAAAQAAVDRALDL 311

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +    +AA         K +C +MA  VI + ++  GG GY+ E  I+R Y ++  
Sbjct: 312 DEIRELTVADAAR-------IKLFCTEMAGRVIDKCLQLHGGYGYMREYPISRLYADTRV 364

Query: 440 NSILLGSGNAMVLDVLNLL 458
           N I  GS   M   +   +
Sbjct: 365 NRIYAGSSEVMKTIIAKDI 383


>gi|261344952|ref|ZP_05972596.1| acyl-CoA dehydrogenase [Providencia rustigianii DSM 4541]
 gi|282567094|gb|EFB72629.1| acyl-CoA dehydrogenase [Providencia rustigianii DSM 4541]
          Length = 378

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 129/373 (34%), Gaps = 26/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R+D+ E   A    L      G         +                   A    
Sbjct: 26  PNAQRYDEEETFCA--ESLTALGEIGCWGINLPEQYGGFGIGSIAMSMIVEAVAAACAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +   + +  T      W PK  S E             +    GLTE   G
Sbjct: 84  SSSLTAHFLATDSILIGGTEEQKNYWLPKAASGE-------------LLGAFGLTEPAAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ A + +   + + G        +  ++  +D  ++ A+ +   G   +   +      
Sbjct: 131 SNPADMRTVATRENGGWRIRGNKHYITNAKEADFIVLYAKTDVEAGARGISAFMIPKGTE 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ +   +  +G R +   EL   N +     LLG+ N       ++     ++ A  S+
Sbjct: 191 GVAFSHPEKTMGLRGSTIYELAL-NCWLPESALLGEENKGFHTAMEVLDKGRVEVAATSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R ++  A+ + + R +    L      +  +AD+   + AA  L++  A   D  + 
Sbjct: 250 GIARAAMESALGWVKERQIGKKPLAAYQGTQWKLADMHTQLEAARLLTWNAAELRDSGER 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S ++A A       K +  + A  V   A++  GG GYI +  + R+ R++    I  G
Sbjct: 310 FSLQSATA-------KLFAAECAGFVTDAALQLHGGYGYIRDLPLERYVRDARILRIFEG 362

Query: 446 SGNAMVLDVLNLL 458
           +     + +   +
Sbjct: 363 TSEIQKIIISRAV 375


>gi|134100540|ref|YP_001106201.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006453|ref|ZP_06564426.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913163|emb|CAM03276.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 383

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 143/395 (36%), Gaps = 33/395 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E+A  AN+   ++  +    +R ++V+       ++ +    G         +  V
Sbjct: 10  AAFREMA--ANFVDAEIVPHVREWDRREEVDL-----GVVEKLGALGFLGLTIPEEYGGV 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                  ++S S+   A  +A   TP   + W P++ S      
Sbjct: 63  EADMLSYALVIEELGRGDSSVRGIVSVSLGLVAKSIATHGTPMQKQRWLPRLTSG----- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                          LTE   G+D  ++ ++ ++  D         +  +   ++  ++ 
Sbjct: 118 --------QAIGCFALTEPESGSDAGSLATRARRDGDDWLLSGQKMFITNGTWAEVALVF 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
           A+ E       V   L   +  G     L  K+G R  AT EL   +        L    
Sbjct: 170 ARAEE-----GVTAFLVPTATPGFTANTLHGKLGLRGQATAELVLEDVRVPDSARLGAAG 224

Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    +  L    +  A  +V   + +L  A+ YA  R   G  +    +++  +A+ A
Sbjct: 225 KGLGIALGALTKGRISVAAGAVGVAQAALTAAVRYAGERVQFGKPIAAHQLVQELLAESA 284

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           +++ AA  L++R A   +    R E A      + + KY   + A  V   A++  GG G
Sbjct: 285 VEVEAARLLTWRAAELAERGVPREELA----TASSMAKYHAGETAVRVANNALQVFGGYG 340

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           YI+E  + ++ R++   ++  G+     L +   L
Sbjct: 341 YIDEYPVGKYLRDARVLTLYEGTSQVQKLIIGRSL 375


>gi|148703120|gb|EDL35067.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_f [Mus
           musculus]
          Length = 438

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 129/366 (35%), Gaps = 37/366 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P     L +    GL        +  +        R   +  +       L
Sbjct: 89  RKIDQEGKIPV--DTLEKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISLDASITVTL 146

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L+        + PK+ S E+                  LTE   G+D 
Sbjct: 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEH-------------IAAFCLTEPASGSDA 193

Query: 212 AAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLED 264
           A+I ++     D  Y  L+G K W  +  +++ F + A+      +G     +    + +
Sbjct: 194 ASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKM-TAFIVE 252

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM 323
               G+   + ++K+G R + T E+ F NT   +   L  V  G    M I   L+S   
Sbjct: 253 RDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI---LNSGRF 309

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           S+           +     YA  R      L +  +++   A +A       ++++  + 
Sbjct: 310 SMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSG 369

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            I A + K +  + A   ++EA++ +GGSGY+++    R  R++ 
Sbjct: 370 MLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424

Query: 439 ANSILL 444
              I  
Sbjct: 425 ILLIFE 430


>gi|41408410|ref|NP_961246.1| FadE19 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396766|gb|AAS04629.1| FadE19 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 388

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 135/372 (36%), Gaps = 31/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEYGGMGGDYFALSLALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +         + W P + +                  G GLTE   G+D  A
Sbjct: 95  GVSLGAMPIYRFGNEEQKRKWLPDLTAG-------------RALAGFGLTEPGAGSDAGA 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----CFLVPRLLEDGSPNG 269
             +   ++ DG + ++G K F+++  +D   ++               +  ++      G
Sbjct: 142 TRTTA-RLEDGEWVINGSKQFITNSGTDITSLVTVTAVTGTVGADKKEISTIIVPSGTPG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVS 326
              + + +K+G  ++ T  L FS+        L    TG    + IL    +  A ++  
Sbjct: 201 FTVEPVYSKVGWNASDTHPLSFSDARVPEENLLGARGTGYANFLSILDEGRIAIAALATG 260

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  + E++ YA+ R   G  +     +   IA +      A    +  A      K  
Sbjct: 261 AAQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLAGKPF 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA A+++A        + A     +A +  GG G++ E  +ARHYR+S    I  G+
Sbjct: 321 KKEAAIAKMIA-------SEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGT 373

Query: 447 GNAMVLDVLNLL 458
               ++ +   L
Sbjct: 374 TEVQLMLIARSL 385


>gi|124009212|ref|ZP_01693893.1| acyl-CoA dehydrogenase, very-long-chain specific [Microscilla
           marina ATCC 23134]
 gi|123985197|gb|EAY25131.1| acyl-CoA dehydrogenase, very-long-chain specific [Microscilla
           marina ATCC 23134]
          Length = 601

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/445 (15%), Positives = 146/445 (32%), Gaps = 49/445 (11%)

Query: 67  SCTAQELARMAN-----YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           S   + +A+           P+L       E  D+ +      +LL ++   GL  +   
Sbjct: 32  SEEQRMMAQTCEDFVQKEVVPRL-------EEIDEAKDPALMSSLLDKAGELGLLATGVP 84

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             ++         +               L + +      +    +      + PK+ + 
Sbjct: 85  TEYDGFGMDFNSSMLITDYTGQGHSFVVALSAHTGIGTLPIQYYGSEAQKAKYLPKLATG 144

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPM 239
           E+                  LTE   G+D  +  ++ +   DG          W  +   
Sbjct: 145 EWK-------------ACYCLTEPDAGSDANSGKTKAELTEDGKHYIINGQKMWITNGGF 191

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D FI+ A+++           + +    G+     + K+G + + T ++ F++    + 
Sbjct: 192 ADIFIVFAKIDDDKKL---TAFIIEKDFGGITMNAPEAKMGIKGSDTRQVFFNDCKVPIE 248

Query: 300 GDL---NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L           ++  +  +     +  G + +L  +I YA  R   G  + +   +K
Sbjct: 249 NMLSTRENGFKIAVNILNIGRIKLCASTHGGAKAALNHSIGYANERKQFGTSIANFGAIK 308

Query: 357 RAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIM------APITKYWC 404
             +A  A+ + A  +  +R   + D+      A    E  A  +          + K + 
Sbjct: 309 HKLAQQAVRLYATESAMYRAGQNIDDSIAAMIANGTPEAEAKLKSFEQFAIECALLKVFG 368

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL----EK 460
            +    V  E ++  GG GY  +    R YR+S  N I  G+     +  +  +     K
Sbjct: 369 SETIDYVSDEMVQIYGGMGYSADAPADRCYRDSRINRIFEGTNEINRILSIGTIVTRSMK 428

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVIT 485
           G          ++++L S  K  I 
Sbjct: 429 GELNVMGAAMEVQKELMSGKKPEIA 453


>gi|325287441|ref|YP_004263231.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324322895|gb|ADY30360.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 602

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/466 (15%), Positives = 156/466 (33%), Gaps = 54/466 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++R++   G        ++  +       +                        +M + 
Sbjct: 66  EVMRKAGELGFLGVAVPEAYNGLGMGFVSTVLTCDYISSGTGSFSTAFGAHTGIGTMPIT 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ + E+                  LTE   G+D  +  +      D
Sbjct: 126 LYGTEEQKQKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTTAVLSED 172

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP---NGLCYQRLKNK 278
           G          W  ++      I+ A++E       +   + +  P   NG+     ++K
Sbjct: 173 GKSYKINGQKMWISNAGFCSLMIVFARIEDDK---NITGFIVEYDPENANGITLGEEEHK 229

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSL 332
           +G R+++T ++ F++T        N+  G  E  KI +  L+   + ++       R  +
Sbjct: 230 LGIRASSTRQVFFNDTVVPA---ENMLAGRGEGFKIAMNALNVGRIKLAAACLDSQRRIV 286

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + YA  R      + D   +K  IA++A +  A  + ++R + + ++  +  E A  
Sbjct: 287 TTGVQYANERKQFKTPISDFGAIKVKIAEMATNAYAGESATYRASKNIEDRIAMREAAGN 346

Query: 393 ARIMA------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
               A             I K    +       E ++  GG G+ EE  +   +R++   
Sbjct: 347 THQEAELKGVEEYAIECSILKVAVSEDVQNCADEGIQIFGGMGFSEETPMEAAWRDARIA 406

Query: 441 SILLGSGNAMVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
            I  G+     +  + +L +K       L     +              D   L  E+K 
Sbjct: 407 RIYEGTNEINRMLSVGMLVKKAMKGHVDLLGPASEVQKELMGIPSFETPDYSELFSEEKE 466

Query: 500 LARFLTEKIALASSAAALYRAGMN---------DIADVFLENRFLD 536
           + + L +K  L  +  A+ + G             AD+ +E    +
Sbjct: 467 MIKKL-KKTFLMVAGGAVQKYGPQLEDHQQLLIAAADILIEIYMAE 511


>gi|114763488|ref|ZP_01442893.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114543768|gb|EAU46780.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 523

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 89/509 (17%), Positives = 166/509 (32%), Gaps = 53/509 (10%)

Query: 38  SSDSL--LVALIA--NFPSVVHKELELLGEYVLSCTAQELARMAN-YNTPQLHAYGPGGE 92
           + D L  L  +      P    +        + S      A  A     P        G 
Sbjct: 8   TDDILFSLRHVARADRLPDWDDE--------LASEITGHFAAFAEGRIAPLDAPGDEQGC 59

Query: 93  RWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           R +  +V     +  +       G         F  +          + ++  A      
Sbjct: 60  RLENGRVRMPDGFAEVYAELSEGGWQGIAAPEEFGGMGLGGPVLAAVSEIFTGANHSLQM 119

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + S +  + S++    +    + + PK+ S E+                + LTE   G+D
Sbjct: 120 VTSLAHGAISLLMRFGSEAQKEAYIPKLASGEW-------------LSTMCLTEPGAGSD 166

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           ++AI ++  +     + + G K F+S    D       ++LA+          +  F  P
Sbjct: 167 LSAIRTKATRDG-ESWRIEGEKIFISGGDQDMTDNILHLVLARTGAPEDGIRGLSLFACP 225

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            + EDG  N +   R++ K+G  ++ T +L F    G L+G        +  M     LD
Sbjct: 226 AIREDGVRNAVTVTRIEEKLGLHASPTCQLAFDGAQGELVGAEGAGLKAMFAMMNHARLD 285

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALS 373
             +  V+    +   A+HYA  R    G       +   P + R I +         AL 
Sbjct: 286 VGLQGVAHAARAADLALHYAAERKQGRGADGTVASIDQHPDVARMIDECDALALGGRALC 345

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                + +       E  +   M P+ KY+C +        A++ +GG GY+ E    ++
Sbjct: 346 HITLVAQELG----TEPDFVEFMTPVCKYFCTEAGSRAADLAIQVMGGYGYLREYGAEQN 401

Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           +R++   +I  G+            L        + F+   +D   + ++          
Sbjct: 402 WRDNRICAIYEGTNGIHARTTATRSLTLNDGAGARAFAAFLRDSDPALEEGAGQWEAEAQ 461

Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAG 521
                   AR     + L    A  YRA 
Sbjct: 462 RISGGGHAARDAHRFMELTCDLA--YRAA 488


>gi|296534321|ref|ZP_06896797.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296265350|gb|EFH11499.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 592

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 92/530 (17%), Positives = 181/530 (34%), Gaps = 63/530 (11%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPA 102
           ++A  P      L      +L    +E  R A      L+A     G R +   V     
Sbjct: 24  VLAGLPGSAGDPL-----PLLRDVLEEAGRFAAQRLAPLNASGDAEGCRLENGVVRLPQG 78

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +       +  G         +      +  +I    +   A    G L   +  +A MV
Sbjct: 79  FAEAYAEFVAGGWGGLAQPVEWGGQGLPRVAQIALDEMLSSANFAFGLLPGLTRGAAEMV 138

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                  +   + PK+ S E+             A  + LTE   GTD+  + ++ +   
Sbjct: 139 ERFAPEPLKSTYLPKLVSGEW-------------AGAMALTEAHSGTDLGLLRTRAEPQP 185

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GS 266
           DG   ++G K F++    +       ++L ++         +   LVP+ L D     G 
Sbjct: 186 DGTLRVTGGKIFITGGDHEAAENIVHLVLVRLPDAPPGVRGISLALVPKYLPDAEGRPGP 245

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            N L    L++K+G  ++ T  + +    G+L+G+ +     +  M     L   +  + 
Sbjct: 246 RNALSAGALEHKMGIHASPTCVMNYDGATGWLIGEPHRGLAVMFTMMNTERLFVGLQGLG 305

Query: 327 GMRVSLAEAIHYARRRHVSG-----------GILIDQPVMKRAIADIALDIAAATALSFR 375
               +   A  YAR R                 ++  P ++R +  I     AA AL+  
Sbjct: 306 IAEAAYQGAARYARDRLQGRAPLSAAGAEGPQPILGHPDVRRMLLTIRGFTGAARALALW 365

Query: 376 LANSFDEAKSRSEEAAYARI------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            A   D+A    + A  A        + P+ K     +       A +  GG GY+ E  
Sbjct: 366 TALEMDKAALHPDPAERAASEGLIALLTPVIKASFTDLGFEATVLAQQVFGGHGYVREWG 425

Query: 430 IARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVIT 485
           + +  R++    I  G+     +D++   +  +   L  + F+ +    + G++      
Sbjct: 426 MEQLVRDARIAQIYEGTNGVQAMDLVTRKIGMEEGRLPFRFFALIRSSIEAGAAIPGAAD 485

Query: 486 ILRDSISLCKEDKGLARFLTEKIAL-----ASSAAALYRAGMNDIADVFL 530
                 +  +  +     L  + A      A++A  L    +  +  ++L
Sbjct: 486 YTAPLAAALQRLEAATERLQARAADPVEAGAAAADYLRFFALVALGWMWL 535


>gi|297203801|ref|ZP_06921198.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197711852|gb|EDY55886.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 380

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 137/390 (35%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQA 132
           A +A    P    +       D +    AW    R +   GL        F         
Sbjct: 19  AFLAREVLPYYAQW-----EKDGIVSREAW----RAAGKQGLLGIAVPEEFGGGGTTDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           +    A  +  A      L   +      +  + T    + W P                
Sbjct: 70  YATVLAEEFTRAGTPGLALGLHNDVIGPYLTGLATEEQKRRWLPGFCDG----------- 118

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
             S+   + +TE   G+D+  I +  ++  D  + L+G K F+S+ + +D  I++A+   
Sbjct: 119 --SLITAIAMTEPGAGSDLQGIRTHAEERGDH-WVLNGSKTFISNGIIADLVIVVARTTP 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G   +  L+ +    G    R  +KIG ++  T EL F +       LLG+ + + G 
Sbjct: 176 EGGARGLSLLVVERGTAGFERGRNLDKIGQKAQDTSELFFHDVRVPKENLLGERDGAFGH 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+ +++     L     Y + R   G  L  +  ++  IA++A + A 
Sbjct: 236 LMTNLAQERLSIAVSAIAAAEHLLEITTEYVKGREAFGRPLATKQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                       D       +     + A + K+W  ++   V    ++  GG GY+ E 
Sbjct: 296 TRTFV-------DRCVEDHSDGGLDAVHAFMAKWWATELQKRVADRCLQLHGGYGYMSEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AR + +    +I  G+   M   +   L
Sbjct: 349 PVARAFTDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|154331163|ref|XP_001562021.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059343|emb|CAM37045.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 416

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 134/373 (35%), Gaps = 30/373 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+   +P  H + +++   GL        +  +       +        A    
Sbjct: 66  PVAAEYDRSMKYP--HEVYKQAWELGLTNMHIPEKYGGLGASVMDGLIVQEELAYACTGM 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  + + + +  T    K +  ++              +  +     +TE  GG
Sbjct: 124 ATAFDGNNLAEAPLLIAGTDAQKKKYLGRMV-------------EEPLLAAYCVTEPTGG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + +  +K  D         W  +  ++  + +LA+ EG    F+V     D +  
Sbjct: 171 SDVAGLKTTARKEGDRWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-----DANAP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+     +  +G R + T  + F N        +     G    M++        AI +V
Sbjct: 226 GVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTRSSVAIAAV 285

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +  EA  YAR R   G  +     +   +A++A  + A   +++R     D+ + 
Sbjct: 286 GLSRRATDEATGYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAGWDTDQGRR 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A++MA         +A    A A++  GG+GY     + + YR+    SI  G
Sbjct: 346 NTYYASCAKMMAA-------NLAEKCAANAVQIFGGNGYNTGYPVEKLYRDCKIFSIYEG 398

Query: 446 SGNAMVLDVLNLL 458
           +       V   +
Sbjct: 399 TTQIQHTIVSRYV 411


>gi|187922781|ref|YP_001894423.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187713975|gb|ACD15199.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 396

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 141/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y+  +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYSQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-EDGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DAIRGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AE+  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  I
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGI 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|73537981|ref|YP_298348.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121318|gb|AAZ63504.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 388

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 141/404 (34%), Gaps = 43/404 (10%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE AR        P  +   P   +  +         L+      G    +    + 
Sbjct: 9   RMIQEAARQFTMERVLPIANKRDPEKGKIPR--------ELIDEMAELGYFGILIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +       + A    L+A+  +   MS     A    L+         A K  S E   
Sbjct: 61  GLG------LGAYEYCLVAEQLSRGWMSVGSLIARGNGLIG--------ALKGLSSERKA 106

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                M +        L+E   G+D+A I+ +  +  D         W   +  +D  ++
Sbjct: 107 EFLPRMARGEFLGAFSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADEADFILV 166

Query: 246 LAQVEG----RVGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           + + +     +     +   + +      P G+    +  KIG     T EL F      
Sbjct: 167 ICRTDPVIDPKARHKGLSAFMVEKPRGELPEGVK-GSVIPKIGYHGWTTWELAFDGCRVP 225

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              ++G+   +              +A  S+   + SL ++I YA+ R+  G  + +   
Sbjct: 226 HSKMVGEEGKAFYLTTAGLETARAHTAARSIGLAQGSLEDSIQYAKGRNQFGNPIGNFQA 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD+A  I A+ AL + +    DE          A   A + K +  +M   V +E
Sbjct: 286 IRFKIADMATQIEASRALLYTVCEKIDEGV-------RADTEASMVKLFASEMCERVTSE 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++  GG+GY    +  R++R++    I  G+ +  +  + + +
Sbjct: 339 GLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSDIQMRIISDAM 382


>gi|134294861|ref|YP_001118596.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134138018|gb|ABO53761.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis
           G4]
          Length = 395

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 151/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   A+  A+  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTEE-ERMVRDAARAYAQ--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGELGLLGPTIPDEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIFEFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A++E   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGADAIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     D N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---DENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|167837676|ref|ZP_02464559.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis
           MSMB43]
          Length = 395

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 132/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEVGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ QK+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAQKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGWKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     D N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEVFVP---DENILPGVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|77456679|ref|YP_346184.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1]
 gi|77380682|gb|ABA72195.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 600

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 88/478 (18%), Positives = 168/478 (35%), Gaps = 60/478 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A   +      ++ +A+
Sbjct: 76  PEVKPAVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    T    + +   +    +  T             + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGTEEQKQRFLQPMIDGRFFGT-------------MALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            SDG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 ASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R                 +I    ++R +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+         R +      ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L   L + G    +QL   +      +   
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAVPY 482

Query: 482 KVITILRDSIS-LCKEDKGLARFLTEKIA-------LASSAAALYRAGMNDIADVFLE 531
           + +T LR+ +  L    + +   L   +A       LA+SA  L   G   I   +LE
Sbjct: 483 ESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLE 540


>gi|16264595|ref|NP_437387.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|15140733|emb|CAC49247.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
          Length = 395

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 142/410 (34%), Gaps = 45/410 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A+       +L        R  +    P+    +      GL       
Sbjct: 23  ERMIRDTARAYAQE------KLQPRVTEAYR--EETTDPSIFREMG---DLGLLGVTVPD 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++  V     A+ + A  +  +       +   S      +    +    + + PK+ S 
Sbjct: 72  TYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVIYPIFAYGSEEQKRKYLPKLISG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D A + ++  K   G   +    W  ++P++D
Sbjct: 132 EW-------------IGCFGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ E       +   + +    GL   ++  K+  R++ T E+   N        
Sbjct: 179 VFVVWAKSEAHDNA--IRGFVLEKGAKGLSAPKIGGKLSLRASITGEIVLDNVEV----G 232

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
                  VE +K     L+ A   +S   +  AE   +A R     R      L    + 
Sbjct: 233 EEALLPNVEGLKGPFGCLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLF 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +IA     S R+    DE +        A  M  I K   C  A  +   A
Sbjct: 293 QKKLADMQTEIALGLQGSLRVGRLMDEGR-------MAPEMISIVKRNNCGKALDIARMA 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 346 RDMHGGNGISEEYQVMRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|301118951|ref|XP_002907203.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans
           T30-4]
 gi|262105715|gb|EEY63767.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans
           T30-4]
          Length = 425

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 79/389 (20%), Positives = 143/389 (36%), Gaps = 36/389 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P     D+ E       L R     GL        +       A     A   L +   
Sbjct: 58  DPQALEHDREEKFNV--KLFRELGDLGLLGITAPEKYGGSEMD-ALAAVIAHEELSSSDP 114

Query: 148 AGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           A  L  ++ S+   + VA   +    + + P   S              +   G+ ++E 
Sbjct: 115 AFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSG-------------AKICGMAMSEP 161

Query: 206 RGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP------MSDAFIMLAQVEGRVGCFL- 257
             GTD+  + +  +K   G  Y L+G K ++++       + D F++ A+          
Sbjct: 162 SVGTDVLGMRTTAKKSDCGKFYLLNGTKMWITNGALDDTELGDTFLVYARTGNSGKAKQD 221

Query: 258 VPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK--- 313
               L +    G     R+K+K G R++ T EL F N    +   +      V  M    
Sbjct: 222 FSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAVLCMMRNL 281

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  +  A MS+   R SL    +YA+ R   G  L +   +++ IA+   +  A  A  
Sbjct: 282 EIERVTLAAMSLGIARRSLEVMSNYAKEREAFGQPLNNFGQIQKNIAESYAEYMAGRAYV 341

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A           ++   R+     K +C  MA  V   A++ +GG GY+ E ++ R 
Sbjct: 342 YNTARKL------KLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERL 395

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGT 462
           +R+S    I  G+  +   +++  L +  
Sbjct: 396 WRDSKLLEIGGGTNESHHKNMVQDLVRNG 424


>gi|126458792|ref|YP_001055070.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           calidifontis JCM 11548]
 gi|126248513|gb|ABO07604.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM
           11548]
          Length = 376

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 135/383 (35%), Gaps = 30/383 (7%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +LH   P     D+  +      +LR+    GL        F         ++       
Sbjct: 18  ELHVR-PRAREIDRGVYP---REILRKLGELGLLAPTIPPEFNGGGSDTLTQVLVVEELA 73

Query: 143 MAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            A      +M   S   A  +  M  PR  ++  PK  S E             +     
Sbjct: 74  RASPGVATIMEIQSSMIAENIYAMGNPRQREELLPKFASGE-------------LICAFA 120

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPR 260
           L+E   G+D  AI ++  ++           W  S   +D +++ A+          +  
Sbjct: 121 LSEPCCGSDAGAIETRAVRVGGEWRISGVKMWITSGLYADYYLVFARTGPKEARHKAITA 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
            L       +    ++  +G R   T E++F+        ++G +N     V     +  
Sbjct: 181 FLVKRGSC-VEATPIE-VMGVRGTGTAEVKFNECPANDDDIVGKINEGWAVVVHALNVGR 238

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              + ++V   R +  EA+ +AR R + G  LI+    +  +A++   I  A  L++  A
Sbjct: 239 AAISGVAVGIARGAFEEALSWARGRRLFGKTLIEFQNTQFELAEMYAAIETARTLTYYAA 298

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D              MA + K    ++A  V   A++  GG GY +E      YR++
Sbjct: 299 YLYDVKSPD------FVAMAHVAKLQTARIAVDVARRAVQLEGGYGYSKESKAEMFYRDA 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+   M   +  LLEK
Sbjct: 353 KILEIGEGTNEVMKYVLFKLLEK 375


>gi|291233917|ref|XP_002736889.1| PREDICTED: acyl-Coenzyme A dehydrogenase, very long chain-like
           [Saccoglossus kowalevskii]
          Length = 635

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 82/469 (17%), Positives = 168/469 (35%), Gaps = 49/469 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
             L+     G       + +  +        R   +     L     L +        + 
Sbjct: 115 ETLQGLREMGAFGLQVPQEYGGLGLTNTQYARLVEIVGAHDLGVGIVLGAHQSIGFKGIL 174

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L    +  + + P++ S E                   LTE   G+D ++I S+     D
Sbjct: 175 LFGDKKQKEKYLPQVASGE-------------KIAAFCLTEPASGSDASSIRSRAVLSED 221

Query: 224 GI-YCLSGHKWFLSSPM-SDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G  Y L+G K ++S+   ++ F + AQ           +   + + S  G+     + K+
Sbjct: 222 GKHYILNGSKIWISNGGTAEIFTVFAQTPSPDGKSKDKITAFIVERSFGGITNGPPEKKM 281

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLA 333
           G + + T EL F +    +    NV  G     K+ +  L++    +       MR  + 
Sbjct: 282 GIKCSNTAELYFEDVKIPV---ENVLGGVGGGFKVAMNILNNGRFGMGAALSGTMRALIQ 338

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A  +A  R   G  +    V++  IA +A+      ++++ ++++ D     S+E    
Sbjct: 339 KAADHAANRTQFGNTIDQYGVIQEKIARMAIKHYVTESMAYMISSNMDAG---SKE---F 392

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +I A I K +  + A +V  E ++  GG G++ +  I R  R+     I  G+ + + L 
Sbjct: 393 QIEAAIGKIYGSESAWSVADECIQICGGMGFMRDSGIERVMRDLRIFRIFEGTNDILRLF 452

Query: 454 V-----------LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISLCKEDKGLA 501
           +           L  L+K        F  + ++     K+++   +  S++         
Sbjct: 453 ISLTGIQNAGGHLKELQKAFKNPAANFGVIVEEANKRAKRMMGFTQGPSLAEYTHPSLSR 512

Query: 502 RFLTEKIALASSA----AALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
                  A+A         L +   N + + FL  R  +     + M+ 
Sbjct: 513 SASQSSKAIAEFGMSVEDLLIKFRKNIVHEQFLLWRVAEAAIDIYGMVA 561



 Score = 37.6 bits (86), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               ++ +  +   +A+ A+DI    A+  R + S +E  S +E  +       + + +C
Sbjct: 535 FRKNIVHEQFLLWRVAEAAIDIYGMVAVLSRASRSLNEGHSTAEHESM------MCQVFC 588

Query: 405 CKMAPAVIAEAMECI 419
            + +  V    M   
Sbjct: 589 NEASVRVAENLMAVR 603


>gi|319950963|ref|ZP_08024835.1| acyl-CoA dehydrogenase FadE19 [Dietzia cinnamea P4]
 gi|319435385|gb|EFV90633.1| acyl-CoA dehydrogenase FadE19 [Dietzia cinnamea P4]
          Length = 381

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 138/380 (36%), Gaps = 35/380 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D+    P  + ++ +    GL    +   F  +     A  +    L  + Q  
Sbjct: 25  PASAEHDRNHTFP--YEVVAQMGEMGLFGLPFPEEFGGMGGDYFALALALEELGRVDQST 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  +    T    + W P +                    G GLTE   
Sbjct: 83  AMTLEAGVGLGAMPIYHFGTDEQREKWLPDL-------------AAGRKLAGFGLTEPGA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLLE 263
           G+D  A  +  ++  D  + ++G+K F+++  +D      + A       G   +  ++ 
Sbjct: 130 GSDAGATKTTAKRDGDE-WVINGNKQFITNSGTDITSLVTVTAVTGTRDNGKKAISTIIV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
                G   +   +K+G  S+ T  L F++    +   L        +   L  LD   +
Sbjct: 189 PAGTPGFTAEPAYDKVGWNSSDTHPLTFADARVPVENLLGEEGRGYANF--LSILDEGRI 246

Query: 324 SVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +++ +     +  + E++ YAR R   G  + +   +   IA +      A       A 
Sbjct: 247 AIAAVATGAAQGCVDESVKYARERESMGRKIGEFQAISFKIARMEARAHTARCAYHDAAR 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                K   +EAA A+++A        + A     +A +  GG G++ E ++ARHYR+S 
Sbjct: 307 LMLAGKPFKKEAAIAKMVA-------SEAAMDNARDATQIHGGYGFMNEYTVARHYRDSK 359

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+    ++ +   L
Sbjct: 360 ILEIGEGTTEVQLMLIARGL 379


>gi|218779917|ref|YP_002431235.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761301|gb|ACL03767.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 383

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 150/380 (39%), Gaps = 32/380 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P  H L ++    G     +D  +        +    A L  + 
Sbjct: 24  KEINPYVDEWEEAGTTPL-HELFKKMGDLGFLGIRYDPKYGGQGMD--YWAECAFLEELG 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA-PMQKTSVAIGLGLT 203
           +++ G +      + ++   M TP +++      F  EY       P     +   + +T
Sbjct: 81  RIDCGGVG----MAITVQTGMATPAIYE------FGSEYLKEKYLMPAIAGDMVSSIAVT 130

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+AA+ +  +K  D  Y ++G K ++++   +D   +LA+     G       +
Sbjct: 131 EPDAGSDVAALKTYAKKEGD-YYIINGSKTYITNGTQADFLTLLARTSDDPGYHCYSLFV 189

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI-----LI 316
                 G    +  +K+G RS+ T EL F N    +   +     G ++ M+        
Sbjct: 190 VPTDLPGFQISKKLDKLGMRSSDTAELYFDNVKVPVENLIGKEGEGFIQQMQQFQHERFT 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L +A + V     ++     Y + R V G  L+ + V++  +A    +  +  AL++ +
Sbjct: 250 ALPTAYVGV---ERAIKRTAEYLKGRIVFGKPLLSKQVLRHRLAQWMAEAESLRALTYHI 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               +  +  + E +  +++A        ++   V    ++  GG G++ E  I+R+ R+
Sbjct: 307 VRLKEAGQDVTREISMGKLLAG-------QLMNKVADGCLQMHGGIGFMNEMWISRYMRD 359

Query: 437 SPANSILLGSGNAMVLDVLN 456
           +   SI  G+   M   +  
Sbjct: 360 AKLISIGGGANEVMSEIIFK 379


>gi|158315816|ref|YP_001508324.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111221|gb|ABW13418.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 399

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 125/386 (32%), Gaps = 38/386 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D  E+  A    ++     GL        +  +                  +    +
Sbjct: 37  ERKD--EYPEAIVEAMK---EMGLFGITIPEQYGGLGESLLTYALVVEEIARGWMSVSGV 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++     A +V    T    +   P++ + E             +     ++E   G+D+
Sbjct: 92  INTHFIVAYLVLQHGTDEQRERLLPRMATGE-------------LRGAFSMSEPGCGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLED 264
           +AIT++  +  D         W  +   +     L + +            FL+ +    
Sbjct: 139 SAITTRAGRDGDEYTITGQKMWLTNGARAGLVATLVKTDEGAESVYRNMTTFLLEKEPGF 198

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
           G+  G+       K+G +   T E+            L    G       ++       +
Sbjct: 199 GTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPGGAGRGFYQMMDGVEVGRV 258

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  +   M  +   AI YA++R   G  + D   +   +AD+A  + A   +    A 
Sbjct: 259 NVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAAR 318

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +    EA  A+ +A        +    V  E+    GG GY +E  I R YRE+P
Sbjct: 319 KKDSGQRNDVEAGMAKYLA-------SEYCHEVTTESFRIHGGYGYSKEYEIERLYREAP 371

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+       +   L K   L
Sbjct: 372 FMLIGEGTSEVQKRIISRALLKEYKL 397


>gi|319950686|ref|ZP_08024587.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435669|gb|EFV90888.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 385

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 136/365 (37%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    GL     D  +       +HK  A +   + +       S    +  +  
Sbjct: 40  RDFYYKLADLGLFGITVDEEYGGAGLD-SHKFEAIQSEEVIRAGVSFGGSNVHVALCLPY 98

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L    T      + PK  S E                 + +TE   G+D+A + +  +  
Sbjct: 99  LKMLATDEQKSRYFPKFVSGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +  L    S  G    R  
Sbjct: 146 EDGTHYILNGAKTFITGGVHADRVIVCARTAPPREDDRRFGISLLAVQTSLEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F++       LLG+ N     +           A  + +    ++ 
Sbjct: 206 DKVGLKTSDTAELSFTDVKVPVEDLLGEENRGFSYLGQNLPSERWGIAFGAYAQAAAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y ++R V G  +      K  +A     + AA A++ R   + D  +  + EAA A
Sbjct: 266 FAKEYTQQREVFGKPVAAFQNTKFELASCQAKVDAAQAVADRALEALDAGELTAAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG G+I E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAAEVIDRCLQLHGGYGFINEYPIARLYSDNRVNRIYGGTNEVMKTI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|86130497|ref|ZP_01049097.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85819172|gb|EAQ40331.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 604

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/491 (16%), Positives = 175/491 (35%), Gaps = 53/491 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHP-AW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
           T +          W++ E    A+    +R++   GL        ++ +       +   
Sbjct: 43  TREFVDRDLWAH-WERFEKKDYAYTEETMRKAGELGLLGVAVPEEYDGLGMGFVSTMLVC 101

Query: 139 RLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                A               +M + L       K + PK+ + E+              
Sbjct: 102 DYISGATGSFSTAFGAHTGIGTMPITLYGNEEQKKKYVPKLATGEWFG------------ 149

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
               LTE   G+D  +  ++     DG          W  ++   + FI+ A++E     
Sbjct: 150 -AYCLTEPSAGSDANSGKTKAVLSEDGKSYKISGQKMWISNAGFCNLFIVFARIEDDK-- 206

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKI 314
            +   ++E+   NG+     + K+G  S++T ++ F++T   +   L +   G    M  
Sbjct: 207 NITGFIVENDPSNGITLGEEEKKLGIHSSSTRQVFFNDTVVPVENMLSDRGNGFKIAMNA 266

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L    +  A   +   R  + EA+ YA+ R      +I+   +K+ +A +A ++    + 
Sbjct: 267 LNVGRIKLAAACLDAQRRVINEAVTYAKERVQFKTPIINFGAIKQKLALMATNVYVDESA 326

Query: 373 SFRLANSFDE-------AKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIG 420
           S+R A + ++         +  +EA         I   I K    +       E ++  G
Sbjct: 327 SYRAAKNIEDRISMRQAEGNTHQEAELKGVEEYAIECSILKVAVSEDVQNTTDEGIQIFG 386

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL----EKGTNLFEQLFSTLEQDL 476
           G G+  +  +   +R++  + I  G+     +  + ++     KG   F      ++ +L
Sbjct: 387 GMGFSADTPMESAWRDARISRIYEGTNEINRMLAVGMMVKKAMKGHVDFMGPAMAVKDEL 446

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN---------DIAD 527
                       +++S   E+K L + L +K+ L  + +A  + G             AD
Sbjct: 447 MGIPSFDTPDYSETLS---EEKALIKSL-KKVFLMVAGSAAQKFGTELEKNQQLLMAAAD 502

Query: 528 VFLENRFLDNC 538
           + +E    ++ 
Sbjct: 503 ILIEIYMAESA 513


>gi|325123534|gb|ADY83057.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 385

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P    W+     P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVQNELNPHIP---EWEAAGRFP-IHDVFKKMGDLGLFGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G+     V  A  V   M TP + +       S+E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGYAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +LA             ++      G+ +    NK+G RS  T ++   N        + V
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGV 227

Query: 305 ---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                           L +   ++ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +  ++       +A + K    ++   V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLTREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|145594789|ref|YP_001159086.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145304126|gb|ABP54708.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 380

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 84/409 (20%), Positives = 149/409 (36%), Gaps = 41/409 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            E   L +       +ELA  A  +              ++ EF      +LR     GL
Sbjct: 10  DEAHDLLDLATELADRELAPKAADHE-------------ERAEFP---REVLRTLGRSGL 53

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
               +   +    +     ++   +     L     +S    S   +A   T    +   
Sbjct: 54  LGLPYAEEYGGAAQPYEVYLQVLEILASRWLAVAEAISVHTLSCFPLAEYGT-AQQRKLL 112

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P +   E             +     L+E +GG+D A +T++     +         W  
Sbjct: 113 PDLIGGE-------------LLGAYCLSEPQGGSDAAHLTTRAVPEGEEYIVSGTKAWIT 159

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            + ++D + +  +  G  G   +  LL D +  G+  Q  +  +G  ++   ++ F  T 
Sbjct: 160 HAHVADFYNIFCRT-GGAGARGISCLLADRNMPGIEPQLAERTMGLHASPVAQVVFDGTR 218

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                L+G      G          L  A  +V   + +L  A+ YAR R   G  ++D 
Sbjct: 219 VPAERLIGGEGKGFGIAMSALDSGRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDF 278

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD A  I+AA AL    A   D  +  S EAA A       K +   +A  V 
Sbjct: 279 QGLGFLLADAATQISAARALMLAAARLRDAGRPYSIEAAKA-------KLFATDVAMRVT 331

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            +A++ +GG+GY+ +  + R+ RE+    I+ G+     L +   L KG
Sbjct: 332 TDAVQVLGGAGYVADHPVERYMREAKVLQIVEGTNQIQRLVISRALAKG 380


>gi|288962491|ref|YP_003452786.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288914757|dbj|BAI76242.1| glutaryl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 392

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 136/394 (34%), Gaps = 41/394 (10%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIR 136
           +   P++ +     ER+D+         ++      GL        +  P V   A+ + 
Sbjct: 33  DRLQPRVISAFRE-ERFDR--------EIMAEMGELGLLGPTIPEEYGGPGVSHVAYGLV 83

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A  +  +       +   S      +    +    K W P++ + E             +
Sbjct: 84  AREVERVDSGYRSAMSVQSSLVMHPIYSYGSEEQKKKWLPRLATGE-------------L 130

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
               GLTE   G+D   + ++  K+  G        W  +SP++D  ++ A+ E      
Sbjct: 131 VGCFGLTEPDHGSDPGGMKTRATKVDGGYLLSGSKMWITNSPIADLAVVWAKSEAHDNK- 189

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
            +   + +    G    +++ K+  R++ T E+     F     D N+            
Sbjct: 190 -IKGFVVERGTKGFSTPKIEGKLSLRASVTGEIVLDEAFVP---DENLLPNVTGLGGPFG 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   ++   +  AE   +A R     R   G  L    ++++ +AD+  +I     
Sbjct: 246 CLNKARYGIAWGVLGAAEFCWHAARQYTLDRKQFGRPLAQTQLVQKKLADMMTEITLGLQ 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + R+    D+     E          + K   C  A  +   A +  GG+G  EE  + 
Sbjct: 306 AALRVGRMMDDGSWSPEA-------ISLIKRNNCGKALDIARVARDMHGGNGISEEFQVI 358

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           RH       +   G+ +   L +L  ++ G   F
Sbjct: 359 RHMVNLETVNTYEGTHDVHAL-ILGRVQTGLQAF 391


>gi|328882607|emb|CCA55846.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 385

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      ++       S      +   
Sbjct: 40  REFYDKLGELGVFGINVPEEFGGAGLDT-HKFEAVLYEETSRAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  + E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLATGDQKKRYLPKFVTGEEM-------------WALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTSAPTAEDRRHGISLFAVDTKSEGYSIGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAQQYVQERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRALEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|118468931|ref|YP_889088.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170218|gb|ABK71114.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 382

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 141/379 (37%), Gaps = 28/379 (7%)

Query: 100 HPAWHALLRRSIHDGLHCS--IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           H A+  L R  I   +  +   W+++                L +    E G    P   
Sbjct: 10  HEAFRTLARDFIEKEVVSAYPEWEKAGRMPRDVFKQMGELGMLGMAIPEEYGGAGIPDYR 69

Query: 158 ---------SASMVALMTTPRVHKDWAPKIFS---REYDPTNKAPMQKTSVAIGLGLTEK 205
                    + ++V L T     +   P        E        +   ++   + +TE 
Sbjct: 70  YNVVLQEEAARALVTLSTVRTQLEVILPYFLHYADTEQRQRWFPGLAAGTLLTAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLL 262
             G+D+A + +   +  D  Y ++G K F++  + +D  +++A+   +       +  L+
Sbjct: 130 GTGSDLAGVRTTAVRDGDH-YVVNGAKTFITGGIQADLVVVVARTSTDPDNRRKGLTLLV 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLD 319
            +    G    R   K+G +   T EL F++    +   LG+   +   +        L 
Sbjct: 189 VEDGMAGFSRGRELEKMGCKVQDTAELSFTDVRVPVANVLGEEGEAFSYLGHNLAQERLT 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ SV+  R ++  AI Y + R   G  +      K  +A  + ++ AA A+  R    
Sbjct: 249 VAVGSVAQARSAIDAAIDYTKTRKAFGTPVASFQNTKFELAACSAEVEAAQAMLDRAVAL 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + +    +AA         K +C +M   V+   ++  GG GY+ E  IAR Y ++  
Sbjct: 309 HVDGELSGADAAR-------VKLFCTEMQARVVDRCLQLFGGYGYMMEYPIARLYTDARV 361

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M + +   L
Sbjct: 362 ARIYAGTSEVMKVIIAKSL 380


>gi|294651514|ref|ZP_06728826.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822602|gb|EFF81493.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 386

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 147/398 (36%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+ + P    W+     P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPFIP---EWEAAGRFP-IHDVFKKMADLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +       S+E  
Sbjct: 60  GLGLDYSYNLVVAE-------ELGRAACGGVPLAIGVQTDMATPALARFG-----SKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P  +      + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 EEFLNPAIRGEYVASIAVSEVHAGSDVAAIKTTAKKEGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGD 301
           +LA             ++      G+ +    NK+G RS  T ++ F N      +L+G 
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVLQRYLVGA 227

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             + +   +V G+   + + I YA+ R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERMWACANAVGGLEKVIQQTIDYAKERTTFGQPLINNQYVHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        ++         ++A + K    ++   V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGEN-------VTMLASMAKLKSGRLTREVADTCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|258593761|emb|CBE70102.1| Acyl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment']
          Length = 399

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 136/375 (36%), Gaps = 32/375 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP    W++ E  PA   L+ +    GL      R +  +          +     A
Sbjct: 22  REIGPHLRDWERAEQIPA--DLVSKIAAQGLLGLCIPRRYGGLGLDYLSLGIVSEELERA 79

Query: 145 QLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 L++  +  ++  +    +    + +               P  +        LT
Sbjct: 80  DTAFRVLIAVHLGLNSLALFQWGSEEQKQRYL-------------VPQARGEKLAAFALT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+A I +  ++   G Y L+G K ++S + ++D F++ A  +   G   +   +
Sbjct: 127 EPDAGSDVAGIRATARRDG-GSYILNGEKTWISLADVADHFLVFAYTDRSAGARGISAFI 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +    G+    + +K+G R   T  +   +          +    V     L  LD+  
Sbjct: 186 VERGFEGVSSFSIHHKLGGRIGNTGSIALQDARVPADN--RIGAEGVGLKIALSALDNGR 243

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            +V+   V L EA       YA +R   G  + +  ++++ IA +         L +++ 
Sbjct: 244 YTVAAGAVGLMEACLEASVAYAEQRQSFGRPIGEHQLVQQKIARMVAGRDVGRLLYYQVG 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              ++    + E + A+ +        C  A     +A++  G  GY +E  + R++R +
Sbjct: 304 WLKNQGMRCTREVSLAKWI-------NCDNAFRAADDAVQIHGAYGYSDEFPVERYFRNA 356

Query: 438 PANSILLGSGNAMVL 452
             + I  G+     L
Sbjct: 357 RGSLIYEGTQEIHQL 371


>gi|254480245|ref|ZP_05093493.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039807|gb|EEB80466.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 385

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 130/380 (34%), Gaps = 28/380 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQL 146
            P  ++W++ E  P    +  +    G  C     ++           +  A        
Sbjct: 28  DPFYDQWERDEVLP--RDIWFKLGAAGFLCVDIPEAYGGAGGTFDMSMVINAEFSRRGYP 85

Query: 147 EAGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G  M+  S   A  +    T    + + P + S E                 + +TE 
Sbjct: 86  SLGGNMTVHSDIVAHYLLNHGTEEQKQHYLPIMISGEC-------------IGAVAMTEP 132

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLED 264
             G+D+  + +  ++  D         +  +  + D  + +A+ +    G   +   + D
Sbjct: 133 GAGSDLQGVRTSARRDGDDWIINGSKTFITNGQLCDMVVTVARTDPDAPGSRGLSLFMVD 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            +  G    R   K+G  +  T EL + +       LLG+L+     +        L  A
Sbjct: 193 TNKTGFSRGRNLEKLGLHAADTSELFYQDVRLPATALLGELHRGFIALMQELPRERLALA 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +V+ M  +L+  + Y + R   G  L      +  +A++  +     A      + ++
Sbjct: 253 VGAVAAMEGALSMTVDYVKEREAFGAPLSKLQNTRFKMAEMQTEYRLNNAFVNECIDKYN 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +  A+ A+           +    V+   ++  GG GY+ E  I+R Y ++    
Sbjct: 313 AGELDAATASMAKYAT-------TEAQCRVVDGCLQMFGGYGYMREYPISRAYADARIQR 365

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I  G+   M   V   +  G
Sbjct: 366 IYGGTSEIMQELVARDVLDG 385


>gi|317124367|ref|YP_004098479.1| butyryl-CoA dehydrogenase [Intrasporangium calvum DSM 43043]
 gi|315588455|gb|ADU47752.1| butyryl-CoA dehydrogenase [Intrasporangium calvum DSM 43043]
          Length = 395

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 137/381 (35%), Gaps = 34/381 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-----IRAARLYLMAQLE 147
            WD+    P    L+ +    GL   +    +     +         +    L  + Q  
Sbjct: 29  EWDRASHFPT--DLVPKMGELGLFGLVVPEEYGGSAGEGQGDFTSLCVAIEELGRVDQSI 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +      + +         + + P + +                  G GLTE   
Sbjct: 87  GITLSAGVGLGINPILTYGNEEQKQRFLPDLVAG-------------RALAGFGLTEPEA 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQV-EGRVGCFLVPRLLE 263
           G+D AA  ++        + ++G K F+++  +D      + A+      G   +  ++ 
Sbjct: 134 GSDAAATRTRAAADG-HEWVVNGSKAFITNSGTDITSVVTVTARTGTNGDGTAAISAIMI 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
                G   +   +K+G   + T  L F +    L    N+     +  K  +  LD   
Sbjct: 193 PSGTPGFTVEPAYHKLGWHVSDTHGLTFEDCRVPL---ENLLGDEGQGFKQFLKTLDDGR 249

Query: 323 MSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +++S + V  A+A       YA+ R   G  +     +   +AD+A+ + A+  L+++ A
Sbjct: 250 IAISALAVGCAQACLELATDYAKTRIAFGRPIGVNQGISFQLADLAVMVEASRTLTYKAA 309

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              DE           +  A I K +  + A +    A +  GG+G++EE  +AR YR++
Sbjct: 310 WLKDELHEGRRSVKEVKHAAAIAKLYSTEAAVSATRIATQVFGGNGFMEEFPVARFYRDA 369

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+     + +   L
Sbjct: 370 KILEIGEGTSEVQRMLIARGL 390


>gi|11498279|ref|NP_069505.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304]
 gi|2649946|gb|AAB90570.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304]
          Length = 414

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 150/400 (37%), Gaps = 31/400 (7%)

Query: 71  QELARMANYNTPQL-HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           +E   + N   P+L           D+V++       L  +    +    +   +     
Sbjct: 17  EEAKELVNAIDPELLRKMDR-----DEVDYP---FEFLEEAAKRKMLGLRFPEEYGGRGL 68

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               +  A     +     G   +        +         +++               
Sbjct: 69  SWTAESVAVEEVGVLGNGIGCSYAMVSIVGEAIYRFGQEWQKEEFLK------------- 115

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           P+ K       GLTE RGG+D    T++ +K  + ++ L+G K F++   ++D +++ A+
Sbjct: 116 PIIKGKKVSAEGLTEPRGGSDFFGTTTRAEKKGN-VWVLNGAKRFIAGGKVADFYLIYAR 174

Query: 249 VEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNV 304
            +    G   +   L +    G+  + L N +G R   T  + F +      + LG++N 
Sbjct: 175 TDPTAPGHKALTAFLVERDM-GVEVEELYNLLGFRGMGTARIVFKDVEVPDEYRLGEVNG 233

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +      M I   + SA  ++   R +L  A+ Y+ +R   G  + +   +   +A+   
Sbjct: 234 ARVIFNRMMIPERMTSAAGALGTARAALEVAVKYSNKRKAFGRKIREFQGVNFMVAEAVT 293

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA AL++  A + D   +        R +    KY+   +   V+ +AM+ +GG GY
Sbjct: 294 KLDAARALTYNAARAVDLYDAGK--GPDPRRLVSEAKYFATDVGWDVVNKAMQILGGIGY 351

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +   + R  R+     I  GS   M + + +   K   L
Sbjct: 352 TQVYPVERMLRDMRLAPIWTGSNEIMKVLIQHETYKMMGL 391


>gi|254509736|ref|ZP_05121803.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533447|gb|EEE36435.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 409

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/432 (19%), Positives = 156/432 (36%), Gaps = 46/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L +   + P  ++ +LE   E +++ +A+  A+      P++       + +   E  
Sbjct: 16  PDLGSFSWDDPFRLNDQLEED-ERLIADSARAYAQ--EKLQPRVT------QAFQNEETD 66

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSA 159
           P     +      GL        +  +          AR           +MS  S    
Sbjct: 67  PGIFREMG---EMGLLGITVPEEYGGIGAGYVSYGLVAREVERVDSGYRSMMSVQSSLVM 123

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + PK+ S E+                 GLTE   G+D AA+ ++ +
Sbjct: 124 YPIYAYGSEEQRRKYLPKLASGEW-------------IGCFGLTEADAGSDPAAMKTRAE 170

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           KI  G        W  ++P++D F++ A+ +   G   +   + D    GL   +++NK+
Sbjct: 171 KIDGGYRLTGSKMWISNAPIADVFVVWAKSDAHDGK--IRGFVLDKGTKGLSAPKIENKL 228

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+           D       V+ +K     L+ A   +S   +  AE   +
Sbjct: 229 SLRTSITGEIVLDGVEV----DEAALLPHVQGLKGPFGCLNRARYGISWGVMGSAECCWH 284

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R      L    + +R +AD+  +I+     S R+    D+A++       A
Sbjct: 285 AARQYGLDRKQFNRPLAQTQLFQRKLADMQTEISLGLQASLRVGRLLDQAEA-------A 337

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L 
Sbjct: 338 PEMISIIKRNNCGKALDIARMARDMHGGNGISLEFHVVRHMINLETVNTYEGTHDVHAL- 396

Query: 454 VLNLLEKGTNLF 465
           VL   + G   F
Sbjct: 397 VLGRAQTGLQAF 408


>gi|331698556|ref|YP_004334795.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953245|gb|AEA26942.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 379

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 129/364 (35%), Gaps = 26/364 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVT 157
             PA   L +     G+   +    F             A     A    A   +  +  
Sbjct: 36  TFPA--ELWKPLGDAGMLGLVTPPEFGGSDGDALAVAIFAEEIARASGGLAVTALVSAYM 93

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + + +    +P     W   I S E                 + +TE   G+D+A I S 
Sbjct: 94  AGTHLVRYGSPAQQDRWLAAIASGE-------------AVAAIAVTEPDTGSDVARIRST 140

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +   DG        +  ++ ++D  ++ A+  G  G   V          GL + R   
Sbjct: 141 ARPADDGWVLDGRKMFITNAGIADVLVVAART-GEPGRRGVTLFEVPAGTPGLSFSRPLP 199

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  S+ T E+           ++G ++     + +   L  +  A M +   +  L  
Sbjct: 200 KMGWHSSDTREVVLDGVRVPSDAVVGAVDRGFYQIMEGFQLERIALAAMGLGHAQECLDL 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ Y R R   G  L     ++  +A + +++ AA  ++ + A   D           A 
Sbjct: 260 ALGYTREREAFGAPLTHLQTIRHRLALMEIELDAARLVTHQAAARLDSGHPE------AG 313

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY     A  ++ +A++  GG+G++EE  +ARHYR++    I  G+    +  +
Sbjct: 314 RSVARAKYLAAVAANRIVDDAVQLFGGAGFVEESPVARHYRDARILRIGGGTDEIQLEIL 373

Query: 455 LNLL 458
              +
Sbjct: 374 TRGM 377


>gi|307303547|ref|ZP_07583301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|307318602|ref|ZP_07598035.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306895629|gb|EFN26382.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306902938|gb|EFN33530.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 395

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 142/410 (34%), Gaps = 45/410 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A+       +L        R  +    P+    +      GL       
Sbjct: 23  ERMIRDTARAYAQE------KLQPRVIEAYR--EETTDPSIFREMG---DLGLLGVTVPD 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++  V     A+ + A  +  +       +   S      +    +    + + PK+ S 
Sbjct: 72  TYGGVGASYVAYGLVAREVERVDSGYRSMMSVQSSLVIYPIFAYGSEEQKRKYLPKLISG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D A + ++  K   G   +    W  ++P++D
Sbjct: 132 EW-------------IGCFGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ E       +   + +    GL   ++  K+  R++ T E+   N        
Sbjct: 179 VFVVWAKSEAHDNA--IRGFVLEKGAKGLSAPKIGGKLSLRASITGEIVLDNVEV----G 232

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
                  VE +K     L+ A   +S   +  AE   +A R     R      L    + 
Sbjct: 233 EEALLPNVEGLKGPFGCLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLF 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +IA     S R+    DE +        A  M  I K   C  A  +   A
Sbjct: 293 QKKLADMQTEIALGLQGSLRVGRLMDEGR-------MAPEMISIVKRNNCGKALDIARMA 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 346 RDMHGGNGISEEYQVMRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 394


>gi|226304274|ref|YP_002764232.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183389|dbj|BAH31493.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 398

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 128/373 (34%), Gaps = 30/373 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           RWD+             +   GL        +        ++ R   +  +A++ A  L 
Sbjct: 41  RWDEQRSID--RDTWLAAGKLGLLGLSVPEEYGGSGVDD-YRFRVVVISELARVGAAALQ 97

Query: 153 SPSVTSASMVALM----TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           S   T+  +V        +    + W P   + E                 + +TE   G
Sbjct: 98  SGFSTNDDIVLNYLLRQGSSDQKRRWLPGFTTGE-------------TIGAIAMTEPGTG 144

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D         +  S  ++D  I++ +     G   +  L+ +    
Sbjct: 145 SDLRGIKATAVQDGDTWVVNGTKTFITSGVLADLVIVVVRTPRNDGTDALSLLVVESGMP 204

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +KIG  +  T EL F N       +LG++    G + +   L  L  A+ + 
Sbjct: 205 GFERGRQLHKIGLTAQDTAELVFDNVRVPQENVLGEIGAGLGYLMESLPLERLGIALAAQ 264

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                ++   + Y   R   G  + +       +AD+A  I    A   R        K 
Sbjct: 265 MSAEAAMHWTVKYVTERKAFGKTISEFQNTGFVLADLATRIDMVRAFLDRTVLQHSSGKL 324

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +AA A++ A        ++   V+   ++  GG GY+ E  IA+ + ++    I  G
Sbjct: 325 SPTDAAKAKLAA-------TELQWDVLDAGLQFHGGYGYMMEYPIAKAFIDARVQRIYGG 377

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   L
Sbjct: 378 TNEIMKEIIQRDL 390


>gi|254516972|ref|ZP_05129030.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
 gi|219674477|gb|EED30845.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3]
          Length = 365

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 86/371 (23%), Positives = 140/371 (37%), Gaps = 23/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E WD+    P    L  ++   GL    +  ++          I +   ++  + E 
Sbjct: 11  PFAEDWDEAGEIPM--DLWPKAAAVGLLGMGYPEAYGGTSE----GIDSWHNWITNE-EL 63

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                  V ++ MV  +  P V   W     S         P+      I LG+TE  GG
Sbjct: 64  NRFAVGGVPASLMVHGIGLPPVLN-WG----SEAMKQMVAPPVLAGEKHISLGITEPGGG 118

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A++ +   +  D  Y ++G K +++  M   ++  A   G  G   V  LL      
Sbjct: 119 SDVASLRTTAVRDGDH-YIVNGSKTYITGGMRANWVSTAVRTGGDGAGGVSMLLIPTDAE 177

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     L  K G  ++ T  L F N       L+G+ N     +        +  A    
Sbjct: 178 GFSRTSLDRKQGWWASDTATLYFDNVRVPVENLIGEENRGFLVIMTNFNSERMFMAASME 237

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  RV L +A ++AR R+  G  L D  V++   A +   + A  A       S +   +
Sbjct: 238 ALGRVCLEDAANWARERNTFGKRLADHQVIRHKFAMMKQKLNATQAYIRVCYESMENGNA 297

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              + A  ++ A  T  +C         EAM+ +GGSGY+    + R YRE   N+I  G
Sbjct: 298 NPGDIALLKVQASETMEFC-------AREAMQILGGSGYMRGNRVERIYREVRVNAIGGG 350

Query: 446 SGNAMVLDVLN 456
           S   M      
Sbjct: 351 SEEIMRDLAAR 361


>gi|218779944|ref|YP_002431262.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761328|gb|ACL03794.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 386

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 142/372 (38%), Gaps = 27/372 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAG 149
               DK    P  H L+++     L                   I A       + + A 
Sbjct: 29  AVEIDKTGEFP--HELMKKYAKMDLLGMTLSAEHGGADMDALTAILAIEELAKFSPMIAA 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   +V  A +++L  T    K   P + S               +++ + +TE + G+
Sbjct: 87  PVFESNVGPARVISLFGTEEQKKAVIPGVCSG-------------DLSVSVCMTEPQAGS 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ ++ +   +  DG Y L+G K F++   M+  +++  + EG  G   +  +L +    
Sbjct: 134 DLTSLDTN-VEEKDGHYVLNGTKVFITGGGMASHYLVYTRFEGIKGHKGIGAVLVESGAE 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVS 326
           G  + + +  +G R   +  L F N        +  +    + M         +A M + 
Sbjct: 193 GFTFGKQEVFLGLRGMPSCALYFDNVKIPKENVVIKAGDFGKLMLAFDIERCGNAAMCLG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +  EA  YA  R   G  + +   ++   AD+A+ + AA  L +R A+   +    
Sbjct: 253 TAGGAFEEARRYAMERQAFGRPICEFQGLQFTFADMAMKLDAARLLVYRAASGAGQGLPS 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA+  +        +  +M   V   A++ +GG GY  +  + R  R++ A  +  GS
Sbjct: 313 IYEASMGKC-------YANEMVKEVTDAALQILGGYGYSTDYPLERMVRDARAWQVAGGS 365

Query: 447 GNAMVLDVLNLL 458
              + + + ++L
Sbjct: 366 LQMLRVTIASVL 377


>gi|299533029|ref|ZP_07046416.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44]
 gi|298719253|gb|EFI60223.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44]
          Length = 408

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 148/402 (36%), Gaps = 26/402 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
            E A +    T      GP  +R  + +   AW    R    +G+  + + R+       
Sbjct: 16  DEAALLERVKTLVAERIGPDADRVAQQDVF-AWDTF-RLLCREGIVATAFPRAHGGSEAS 73

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              ++R           A  L++ +  S+  +    +  +     P + S          
Sbjct: 74  MMLRVRIIEEVASVCSTAASLVTGTDLSSRPIVAGGSEALRSALIPDLASG--------- 124

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ- 248
               +      LTE   G+D++ + +       G + L+G K F++ + ++D F+++A+ 
Sbjct: 125 ----ARQSAFALTEPGAGSDVSRLGAHYAPAPQGGWTLNGQKKFITRANVADMFVVVARQ 180

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305
            +G  G   +   +      G+    +  K+G        + F +       LLG     
Sbjct: 181 ADGPGGGRGLSAFVVPRDTPGITVSPVIPKLGWYGVPIALVSFDDVHIAPEHLLGKEGEG 240

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +D  +   +  A +++     +L  A  YA +R V G  +     ++  +A++A  
Sbjct: 241 MALAQDTLLRARIGHAAIALGRAAGALQIAAQYANQRQVFGQPVGAHQGIQWMVAEMAAQ 300

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +  A  +D         A   I A I K     +   ++ + ++ +GG+GY+
Sbjct: 301 IEAARCLVYSTAQRYDAGD------ADVAIHASIAKLHATDLCMRIVVDCLQLLGGNGYL 354

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +   + R  R++  N I  G+       +   + +      Q
Sbjct: 355 KAFPLERFLRDAKMNQIGEGTSEIHKTLIGRHVLRRAAALPQ 396


>gi|254818880|ref|ZP_05223881.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 381

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 138/400 (34%), Gaps = 40/400 (10%)

Query: 68  CTAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +EL R     T  P   ++   G+ WD+  F  A           GL          
Sbjct: 11  HQFRELVRDFVRQTVAPNHESWERDGQ-WDRSLFIEAGK--------LGLLGFSVPEHLG 61

Query: 126 PVV----RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                  R  A  I   +    A       +   V    +  L TTP   + W P + + 
Sbjct: 62  GPGVDDFRYNAIVIDELQRAGAAAEAIAFTLQNDVVLPYLTDL-TTPEQQQRWLPGVVTG 120

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E               +G+G+TE   G+D+A I +   +  D  Y ++G K F+S+    
Sbjct: 121 E-------------TVLGIGMTEPGTGSDLAGIRTTAVRDGDD-YVVNGAKTFISNGQVG 166

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
              ++A          +  L+ D    G    R   KIG  +  T EL F++        
Sbjct: 167 DLFVIAVRTSPDRHQGLSLLVVDADTPGFSRGRNLEKIGLHAQDTSELTFTDMRVPKDNL 226

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L     G  + MK L    L   + +V+     LA  + Y R R   G  +      +  
Sbjct: 227 LESEGRGFYQLMKNLPQERLALGVGAVAAAETILAATLDYVRDRTAFGSPIASFQHSQFV 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A +I  A           D+  +   E       A   K+W   +        ++ 
Sbjct: 287 LAELATEIDVARTY-------LDDCLAEHLEGELTAARAARLKWWTTDLQVRTADRCLQL 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ E S+AR + ++   +I  G+   M   +   L
Sbjct: 340 HGGYGYMREYSVARAFVDARIQTIYGGTNEIMKTIIAKDL 379


>gi|154251277|ref|YP_001412101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155227|gb|ABS62444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 409

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/460 (17%), Positives = 151/460 (32%), Gaps = 58/460 (12%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71
           M++  + S +       P     N    D LL          + ++L    E ++  +A+
Sbjct: 1   MSKAAEASPAKSGEKPNPPLASFNW--QDPLL----------LDEQLTEE-ERMVRDSAR 47

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
                      +L        R +   FH     ++      G+        +       
Sbjct: 48  AYCEE------KLFTRVKEANRHE--IFH---REIMNEMGAQGMLGLTLPEKYGCAGLSY 96

Query: 132 AHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                AAR            MS  S      +    T    + + PK+ + E+       
Sbjct: 97  VCYGLAAREVERVDSGYRSAMSVQSSLVMHPIYAYGTEAQREKYLPKLATGEW------- 149

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                     GLTE   G+D  ++ ++  K+  G        W  ++P+SD  ++ A+ E
Sbjct: 150 ------VGCFGLTEPDHGSDPGSMRTRAAKVDGGYVLNGAKMWITNAPISDLAVVWAKTE 203

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
             V    +   + +    G    +++ K   R++ T E+   + F     D N+      
Sbjct: 204 DDV----IRGFVVERGFKGFETPKIEGKFSLRASITGEISLQDVFVP---DENLLPNVRG 256

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALD 365
                  L+ A   ++   +  AE   +A R     R   G  L    ++++ +AD+  +
Sbjct: 257 LAGPFGCLNRARYGIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQLIQKKLADMQTE 316

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I        +L   FD   +       A     + K   C  A  +   A +  GG+G  
Sbjct: 317 ITLGLQGCLQLGRMFDAGTA-------APASISLMKRNNCGKALDIARVARDMHGGNGVS 369

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 370 DEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGREQTGIQAF 408


>gi|302187073|ref|ZP_07263746.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 393

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWVGLSAPAIHGKVGLRASITGEIVMDNVFVPEDNI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 LARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|296208288|ref|XP_002751026.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 1 [Callithrix jacchus]
          Length = 421

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +                        +  +      V + 
Sbjct: 77  LIRRAWELGLMNTHIPENCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGEMPVIIA 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+AAI ++ +K  D  
Sbjct: 137 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAAIKTKAEKKGDEY 183

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 184 IINGQKMWITNGGKANWYFLLARSDPDPQAPANKAFTGFIVEADTPGVQIGRKELNMGQR 243

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 244 CSDTRGIVFEDVKVP---KENVLIGEGAGFKIAMGAFDRTRPAVAAGAVGLAQRALDEAT 300

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L +   +   +A++ + +  A     R A   D  +  +         
Sbjct: 301 KYALERKTFGKLLAEHQAVSFILAEMVMKVELARMSYQRAAWEVDSGRRNT-------YY 353

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  +    R++    I  G+     + V  
Sbjct: 354 ACIAKAFEGDIANQLARDAVQIFGGNGFNTEYPVENIMRDAKIYQIYEGTAQIQRVIVAR 413


>gi|152986723|ref|YP_001345944.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150961881|gb|ABR83906.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 393

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 142/409 (34%), Gaps = 45/409 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +AQ+ A  A      L A+          +  P    + R     GL  +    
Sbjct: 23  ERMVRDSAQQFA-QAKLAPRVLEAFR-------HEQTDP---KIFREMGETGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 72  AYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDEGQ----IRGFVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENA 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
                G          L+SA   +S   +  AE   +  R     R   G  L    +++
Sbjct: 235 FPEVRGLR---GPFTCLNSARYGISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQ 291

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +   A 
Sbjct: 292 KKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLAR 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 345 DMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|146302483|ref|YP_001197074.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146156901|gb|ABQ07755.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 601

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/461 (16%), Positives = 154/461 (33%), Gaps = 50/461 (10%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALM 165
           +R++   GL        +  +       +        A               +M + L 
Sbjct: 69  MRKAGELGLLGVAVPEEYGGLGMGFVSTMLVCDYISGATGSFSTAFGAHTGIGTMPITLY 128

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    K + PK+ S E+                  LTE   G+D  +  ++     DG 
Sbjct: 129 GTEEQKKKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSDDGK 175

Query: 226 Y--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y        W  ++     FI+ A++       +   ++E+   NG+     ++K+G R+
Sbjct: 176 YYSITGQKMWISNAGFCSVFIVFARIGDDK--NITGFIVENDPSNGISMNEEEHKLGIRA 233

Query: 284 NATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++ F+ T   +   L     G    M  L    +  A   +   R   + A+ YA 
Sbjct: 234 SSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGRIKLAAACLDAQRRVTSGAVKYAN 293

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAY- 392
            R      +     ++  +A++A +  A  + S+R A   ++  +  E       EA   
Sbjct: 294 ERIQFNTSISSFGAIRSKLAEMATNAYAGESASYRAAKDIEDRIAAREAEGTSHQEAELK 353

Query: 393 ----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 I   I K    +       E ++  GG G+ E+  +   +R++    I  G+  
Sbjct: 354 GVEEYAIECSILKVAVSEDVQNCSDEGIQVFGGMGFSEDTPMESAWRDARIARIYEGTNE 413

Query: 449 AMVLDVLNLL----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504
              +  + +L     KG          ++++L            +  S  K      +  
Sbjct: 414 INRMLSVGMLIKKAMKGHVDLLGPAMKVQEELMGIPSFDTPDFSELFSEEKVIVANLK-- 471

Query: 505 TEKIALASSAAALYRAGMN---------DIADVFLENRFLD 536
             K+ L  + +A+ + G             AD+ +E    +
Sbjct: 472 --KVFLMVAGSAVQKYGPELDSHQQLLMAAADILIEIYMAE 510


>gi|256420084|ref|YP_003120737.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256034992|gb|ACU58536.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 597

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 149/414 (35%), Gaps = 48/414 (11%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVE--FHPAWHALLRRSIHDGLHCSIWDRS 123
              +E+A        +P L       +R DK+E    P+   LL ++   GL  + +   
Sbjct: 37  RMIREMAEQFVTKEVSPVL-------DRIDKLEEGLMPS---LLDKAGELGLLGAAFPEE 86

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
           +  + +                  +  + + +   +  +    T    + + P + S + 
Sbjct: 87  YGGLGKDFVTATLINEALGAGHSFSVAMAAHTGIGSLPILYFGTEAQKQKYIPFLGSGQM 146

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSD 241
                             LTE   G+D  +  +  +  +DG  Y L+G K W  +S  +D
Sbjct: 147 KG-------------AYALTEPNSGSDALSAKTTAKLSADGKFYILNGQKCWITNSGFAD 193

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F + A+++G          + D    G      ++K+G + ++T ++ F +    +   
Sbjct: 194 VFTVFAKIDGEQ----FTAFIVDKDTPGFTLGAEEHKMGIKGSSTRQIYFQDAQVPVENV 249

Query: 302 LN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L  +  G +    IL    L     +V   +   +  + YA  R      + +   +K  
Sbjct: 250 LGEIGKGHLIAFNILNIGRLKLCAAAVGAAKNVTSITVQYANTREQFKQPIANFGAIKHK 309

Query: 359 IADIALDIAAATALSFRLANSFDE--------AKSRSEE----AAYARIMAPITKYWCCK 406
           + ++ +      +  +R A   D+         K  +E     A    +   I K    +
Sbjct: 310 LGEMVIRNWVCESALYRTAQLIDDKEKELLAAGKPFAEALLGAAEEYAVECAILKVAGSE 369

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                + E ++  GG+G+ +E  I++ YR+S  N I  G+     L  L++  K
Sbjct: 370 ALDFSVDEGVQIHGGNGFSDEYVISKAYRDSRINRIFEGTNEINRLLALDMTLK 423


>gi|41408503|ref|NP_961339.1| FadE3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118464909|ref|YP_880809.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254774395|ref|ZP_05215911.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41396859|gb|AAS04722.1| FadE3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166196|gb|ABK67093.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 397

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 132/383 (34%), Gaps = 35/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ + +P    ++ +    GL   +  + +  +                  +  
Sbjct: 31  PHAAELERADTYP--QDIVDQMRDMGLFGLMIPQEYGGLGESLLTYALCVEELARGWMSV 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A M+    T    + + P++   E                   ++E   G
Sbjct: 89  SGVLNTHFIVAYMLRQHGTDEQKQRFLPRMAVGE-------------TRGAFSMSEPELG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEG--RVGCFLVPRLLEDG 265
           +D+AAI ++ ++  DG Y + G K +L++  +   I +L + +         +   L + 
Sbjct: 136 SDVAAIRTRARRDPDGGYTIDGQKMWLTNGATSTLIAVLVRTDEGSDKPHRNLTAFLVEK 195

Query: 266 SPN------GLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKIL 315
                    GL      +K+G +   T EL F          L G        + D   +
Sbjct: 196 PVGFGEVVAGLRIPGKIDKLGYKGIETTELIFDGYRAAADDILGGTPGQGFFQMMDGIEV 255

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ +  +      +   A+ YA++R   G  + +   +   +A++A  + AA  +   
Sbjct: 256 GRVNVSARACGVAIRAFELAVRYAQQRETFGKPIAEHQAIAFQLAEMATKVEAAHLMMVN 315

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +     A  A+ +A        +    V  ++    GG GY +E  I R  R
Sbjct: 316 AARLKDSGERNDVAAGMAKYLA-------SEYCAEVTQQSFRIHGGYGYSKEYEIERLMR 368

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++P   I  G+       +   L
Sbjct: 369 DAPFLLIGEGTSEIQKNIISKRL 391


>gi|260905580|ref|ZP_05913902.1| putative acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 387

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 124/364 (34%), Gaps = 26/364 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVAL 164
           +++ S   GL        +  +        + A  L            + +  +  ++  
Sbjct: 38  IIKESAEMGLFGWALPEEYGGLGMNAEQDAQLAMELGYTTPAFRSVFGTNNGIAGQVLVN 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S               V     LTE   G+D + + ++  +  D 
Sbjct: 98  YGTDEQKSQWLPKLTSG-------------DVVASFALTESEAGSDPSGMRTRAVREGDD 144

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                  ++  ++  SD  ++ A+ +    G   +   L      G+      NK G   
Sbjct: 145 YVINGSKRFITNAESSDVLMVFARTDPNAKGSKGISVFLVPTKTAGVTVGTHDNKTGQAG 204

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T E+ F +        + G+                L  A + V      L E++ YA
Sbjct: 205 AWTSEIFFDDVRIPAANLIGGEEEKGFYAAMASLNKGRLHIAAICVGQATRILDESVTYA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
                 G  +    +++  +ADI  ++AAA AL    A  +D  + R       ++    
Sbjct: 265 AEAKQGGEPIARFQLVQAMLADIYTEVAAAKALVLAAAKRWDAEEDR-------KLGPSS 317

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +    +  + ++  GG+GY+ E ++ R YR +    I  G+     + V   L 
Sbjct: 318 AKLFASEALGRIADKGVQIQGGTGYMRESAVERFYRHARLFRIYEGTSEVQRVVVARQLL 377

Query: 460 KGTN 463
           KG +
Sbjct: 378 KGAH 381


>gi|134099668|ref|YP_001105329.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912291|emb|CAM02404.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 382

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 122/351 (34%), Gaps = 22/351 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R++   GL    +              I        A    G   S      ++  
Sbjct: 40  RWLHRKAGEIGLLGVAFPEEAGGGGGDIVDTIVLGEEMHYAGASGGLFASLLTCGIALPH 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           ++      +                 P         L +TE  GG+D+A + +  ++  D
Sbjct: 100 IVAAGDAAQ-----------VGRWVRPTLAGEAIGALAVTEPGGGSDVAGLRTTAERDGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            +   +G K F++S     F+  A   G  G   +  L+ +    G    R  +K+G + 
Sbjct: 149 HLVV-NGAKTFITSGCRADFVTTAVRTGAPGAHGISLLVVERGTPGFEVSRRLDKMGWQC 207

Query: 284 NATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +        +         +    +   +  A+ + +G + +L   + + R
Sbjct: 208 SDTAELSFVDCRVPAANLVGAQDSGFVQIAQHFLTERIMLAVQAYAGAQRALDLTVSWCR 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  LI + +++  + ++A  +  A +    +A           E  +A+  A   
Sbjct: 268 MRETFGRPLISRQLVRHTLVEMARKVDVARSYVHDVARRHLAGDDVVAEVCFAKNTAVEA 327

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             W       V+ +A++  GG+GY+ E  + R YR+     I  G+   + 
Sbjct: 328 GTW-------VVDQAVQLHGGAGYMRESEVERQYRDMRILGIGGGTSEVLA 371


>gi|288918822|ref|ZP_06413167.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288349784|gb|EFC84016.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 379

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 130/378 (34%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              G   + W++    P       ++   G+        +                   A
Sbjct: 23  KEIGAHYQEWEEAGLPP--RDFYNKAGDLGILGLCIPEEYGGGGADFLFNAVVTEEAARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
               G L   +  S             + W P + S E             +   L LTE
Sbjct: 81  GYALGPLRIHADISVPYFVDHGNAEQKQRWLPGLASGE-------------LVAALALTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +++  ++  D  Y ++G K F++  + +D F+   + +       +  L+ 
Sbjct: 128 PGAGSDLAGMSTSARRDGD-YYVVNGSKTFITGGLNADLFLTAVKTDPTQRHAGLSLLVI 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
            G   G+      +KIG      VE+ F +       LLG+       +    +   L  
Sbjct: 187 PGDLPGVSRGAPLHKIGLHIQEAVEIFFDDVRVPAENLLGEEGQGFTYLTSHLVQERLSI 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI +       + + + Y   R + G  L      K  +A  A ++ A  AL  ++  + 
Sbjct: 247 AINAQGAAASIVEQTVEYVNGRKLFGKTLNTFQNTKFVLAGCATEVDAGQALLDQVLLAH 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              ++   +AA         K +C +M   VI   ++  GG GYI E  +AR + ++   
Sbjct: 307 VAGEATPADAAK-------VKLYCTEMQGRVIDACLQLFGGYGYINEYPVARAWADARVG 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS   M   +   L
Sbjct: 360 RIYGGSSEVMKTIIAKSL 377


>gi|307728568|ref|YP_003905792.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307583103|gb|ADN56501.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 396

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 140/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DTIRGFILERGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AEA  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  I
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGI 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|119504493|ref|ZP_01626572.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119459515|gb|EAW40611.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 400

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 124/354 (35%), Gaps = 32/354 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R     GL  S  D    P V    + + A  +  +       L   S      +     
Sbjct: 66  REMGEMGLLGSTIDGYGCPGVDYVCYGLVAREVERVDSGYRSMLSVQSSLVMYPIYAYGD 125

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + PK+ + E+                 GLTE   G+D   +T++ + +  G   
Sbjct: 126 DAQREKYLPKLATGEW-------------IGCFGLTEPDHGSDPGGMTTRAKSVDGGYRV 172

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +SP++D F++ A+ +  V    +   + +    GL   +++ K+  R++ T 
Sbjct: 173 SGAKMWISNSPIADVFVVWAKTDDDV----IRGFILEKGMEGLSAPKIEGKLALRASVTG 228

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----R 342
           E+     F     + N+             L++A   ++   +  AE   +  R     R
Sbjct: 229 EIVMDEVFVP---EENLLPNVRGLKGPFGCLNNARYGIAWGTLGAAETCWHTARQYTLDR 285

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    +++  +AD+  DI+ A    FR            +       +  + K 
Sbjct: 286 QQFGRPLAANQLIQLKLADMQTDISLAMQGCFRAGQMLSAGTISPD-------LISLIKR 338

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             C  A  +  +A + +GG+G  +E  I RH       +   G+ +   L +  
Sbjct: 339 NSCGKALEIARKARDMLGGNGISDEYPIMRHMMNLEVVNTYEGTHDIHALILGR 392


>gi|226362035|ref|YP_002779813.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240520|dbj|BAH50868.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 381

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 137/380 (36%), Gaps = 36/380 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HK 134
           +A    P   A+   G   DK  FH        R+   G+        +     +     
Sbjct: 21  LARDVEPHYEAWAEAGV-VDKTVFH--------RAGEIGITGLQIPEEYGGGGIESFKFN 71

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                  + +    G LM  +           T    + W P I S              
Sbjct: 72  AVVTEELVRSGASLGGLMLHTNVLLPYFLEYATEEQRQRWFPGIVSGH------------ 119

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGR 252
            +   + +TE   G+D+A + +   +  D +Y L+G K F++  +  D  +++A+  +G 
Sbjct: 120 -IVGSIAMTEPGTGSDLAGMATTAVRDGD-VYVLNGAKTFITGGINCDLVVVVARTSKGE 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
                +  L+ +    G    R   K+G ++  T EL F++       LLG    + G +
Sbjct: 178 DRREGLSLLVVEDGMPGFERGRNLKKLGLKAQDTAELSFTDVRVPVTNLLGVEGAAFGYL 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L +AI + +    +LA  + Y + R   G  +      K  +A  A++I A 
Sbjct: 238 GFNLPQERLATAINAQASAEAALAMTVEYVKERKAFGTTISSFQNTKFELASCAIEIEAG 297

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +  R     DE    + +AA         K +  ++   VI   ++  GG G++ E  
Sbjct: 298 RTMVDRALEELDEGTLTAADAAK-------VKVYTTELQARVIDRCLQLHGGYGFMMEYP 350

Query: 430 IARHYRESPANSILLGSGNA 449
           IAR Y ++    I  G+   
Sbjct: 351 IARMYADARVTRIFAGTTEV 370


>gi|144898057|emb|CAM74921.1| glutaryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 392

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 146/404 (36%), Gaps = 39/404 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-P 126
              ++ AR  +Y   +L        R ++ +       ++      GL        +  P
Sbjct: 21  RMIRDAAR--DYCQDKLQPRVISAFREERFD-----REIMTEMGALGLLGPTVPEEYGGP 73

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            V   A+ + A  +  +       +   S      +    +    + W P++ S E    
Sbjct: 74  GVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEAQKQKWLPRLASGE---- 129

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                    +    GLTE   G+D A++ ++ +K+  G        W  +SP++D  ++ 
Sbjct: 130 ---------LVGCFGLTEPDSGSDPASMRTRAKKVDGGYLLSGQKMWITNSPIADIAVVW 180

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +G  G   +   + +    G    +++ K+  R++ T E+     F      L  ++
Sbjct: 181 AKSDGHDGK--IKGFVVERGTKGFTTPKIEGKLSLRASVTGEIVLDEAFVPEDNLLPNAS 238

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIAD 361
           G          L+ A   ++   V  AE   +A R     R   G  L    +++  +A+
Sbjct: 239 GLAGPFG---CLNKARYGIAWGVVGAAEFCWHAARQYTLDRKQFGRPLAANQLIQFKLAN 295

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  DIA A   + R+    D+        ++A     + K   C  A  +   A +  GG
Sbjct: 296 MQTDIALALQAAIRVGRMMDDG-------SWAPEAVSLIKRNNCVKALDIARVARDMHGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G  +E  + RH       +   G+ +   L +L   + G   F
Sbjct: 349 NGIADEFQVMRHMVNLETVNTYEGTQDVHAL-ILGRSQTGIQAF 391


>gi|326383653|ref|ZP_08205339.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197737|gb|EGD54925.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 387

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 137/373 (36%), Gaps = 28/373 (7%)

Query: 96  KVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMS 153
           ++  + A    +R++  D GL      + +  +    A  +  A       L       +
Sbjct: 27  EIADNDAIPDDIRQACKDMGLFGFAIPQEWGGLGLDLAQDVELAMELGYTSLAMRSMFGT 86

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +  ++    T      W   I S E                   LTE   G++ A 
Sbjct: 87  NNGIAGQVLVNFGTDEQKSTWLESIASGE-------------TVASFALTEPGAGSNPAG 133

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
           + ++  +  +G + + G K F+++ P ++ F+  A+          +   L  G   G+ 
Sbjct: 134 LRTKAVRQENGDWVIDGSKCFITNAPTANLFVTFARTRAADADGPGIAVFLVPGDTPGIS 193

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                 K+G   + T ++ F          + G  +V             +  + ++V  
Sbjct: 194 VADHDRKMGQEGSWTADVHFDGVRVPATALVGGSEDVGYRAAMVSLARGRVHISGLAVGA 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L E++ +A      G  + D  +++  +AD+   + A  AL+   A  +   + R 
Sbjct: 254 AQRALDESLRHAAVTTQGGTPIGDFQLVQAHLADMQTQLMAGRALARDAAAKWVSEEDR- 312

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 RI   + K +C +M   V  +A++  GGSGY+ E  + R YR+     +  G+ 
Sbjct: 313 ------RIAPSVAKLFCTEMVGEVADKAVQIHGGSGYMREMPVERIYRDVRLLRLYEGTS 366

Query: 448 NAMVLDVLNLLEK 460
               L +   L K
Sbjct: 367 EIQRLIIGGGLVK 379


>gi|167566833|ref|ZP_02359749.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147]
 gi|167573902|ref|ZP_02366776.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 383

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 146/395 (36%), Gaps = 24/395 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +     +AR       Q     P  + W++    PA H + ++    G+       +F  
Sbjct: 4   TEEHAAIARTVKRFIEQ--EVNPHVDEWEEAGIFPA-HDVFKKLGALGMLGLSKPAAFGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                ++++      +MA+            +  +   M TP +   +       EY   
Sbjct: 61  GELDYSYEL------VMAEALGVCAAGGVPLAIGVQTNMATPAL-ARFGSDALRGEY--- 110

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
             AP         +G++E   G+D+A+I +  +K  D         W  +   +D    L
Sbjct: 111 -LAPAIAGEQVSCIGVSEPGAGSDVASIRTAARKDGDDYVISGTKLWITNGTQADWMCCL 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A             ++      G+  ++   KIG  S+ T ++ F +       L+G+  
Sbjct: 170 ANTSDGPPHRNKSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEG 229

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                         L  A  ++  +  S+ E I Y R+R + G  ++D  V+   +A++ 
Sbjct: 230 QGFTYQMLQFQEERLYGAAAALVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELK 289

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ A  AL++R    + +             +A + K    ++A  V    ++  GG G
Sbjct: 290 TEVEALRALTYRATELYVQGGD-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMG 342

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E SI+R YR++   SI  G+   M+  +   L
Sbjct: 343 FAWESSISRTYRDTRLFSIGGGADEVMLGIICKKL 377


>gi|46255145|ref|YP_006057.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27]
 gi|46197994|gb|AAS82404.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27]
          Length = 541

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 107/458 (23%), Positives = 182/458 (39%), Gaps = 41/458 (8%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y +D  L  L+ +F         EL   G Y+     +    +     P+L  +  
Sbjct: 17  GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    +L+R                P     +     A  YL+A     
Sbjct: 77  DGNRVDRVRLSPVQREVLKRLR----------PIVRPPYEGGSWHHHFALGYLLADGGLY 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +           +AP + S       K  +          +TE +GG+
Sbjct: 127 CILTITHQVAYPIH---------KYAPGLASW------KERVLYGEAFGATWMTEIQGGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A  +  ++  +      G K+F S   ++D  ++ A+ EG       +  FL+PRL 
Sbjct: 172 DLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLPRLD 231

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            +G  N    +RLK K G R+  + E+E   +  +L+G          +   +  L +AI
Sbjct: 232 REGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLANAI 290

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L E     RRR   G  L D P+++  + D+++  A   AL+     +FD 
Sbjct: 291 AAMGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALALAAVEAFDR 350

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A        E    AR ++ + K    + +  +   AME  GG G++EE ++AR +RES 
Sbjct: 351 AWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHRESL 410

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
              I  G  N   LD+L  ++K         + LE  L
Sbjct: 411 ITPIWEGPSNIQALDLLEAMQK-KGAHRPFLAWLEARL 447


>gi|329937921|ref|ZP_08287403.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302878|gb|EGG46767.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 385

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 137/365 (37%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    GL        +     + +HK  A +    A+       S      +   
Sbjct: 40  REFYYKLAELGLFGINVPEEYGGAGLE-SHKFEAVQYEETARAGVTFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  S E                 + +TE   G+D+A + +  +  
Sbjct: 99  IKMLATDEQKKRYLPKFVSAEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPTAEDRRFGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPTEDLLGEENKGFHYLGANLPSERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +  + EAA A
Sbjct: 266 FAKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAEAVADRALEALDAGELTAAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKNM 383


>gi|171057674|ref|YP_001790023.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775119|gb|ACB33258.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 597

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/589 (17%), Positives = 195/589 (33%), Gaps = 79/589 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMANYNTPQLH-A 86
           P            ++  ++    S         L     +    +  R A      L+  
Sbjct: 6   PPLEDWRF-----VIEQVLDAPASWRAQPAFADLDAETAAEVLAQGGRFAAEVIAPLNGP 60

Query: 87  YGPGGERWDK-----VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
               G RW       V     + A  +  +  G      D +       Q        + 
Sbjct: 61  GDRQGCRWSPDDGGTVRTPDGYPAAWQAFVDGGWPALACDPAVGGQGLPQLLNAALFEML 120

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + A             +   +    TP + + +  K+ S E+                + 
Sbjct: 121 IAANHAWTMYPGLLHGAYEAIKATATPELRERYLSKVVSGEW-------------LATMN 167

Query: 202 LTEKRGGTDIAAITSQGQKISD----GIYC-LSGHKWFLSSPMSD-----AFIMLAQV-- 249
           LTE + G+D+  I S+ + +      G    +SG+K F+S    D       ++LA++  
Sbjct: 168 LTEPQAGSDLGLIRSKAEPLDGTLTSGSRVAVSGNKIFISGGDQDMTANIVHLVLARLPD 227

Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
                  +   LVP+ L DG+ N      +++K+G   ++T ++ F    G+LLG+    
Sbjct: 228 APAGTKGLSLILVPKFLPDGTRNAAWCDGIEHKMGIHGSSTSQMRFERATGWLLGEPGTG 287

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------------ 347
              +  M     L  A+  ++ +  +  +A+ YA+ R                       
Sbjct: 288 LAAMFLMMNSARLHVAMQGLAHLEGATQKALAYAQERVQLRAPGRPADAMPSGGASGGPD 347

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITK 401
            ++  P M+R +  +      A  L+  +    DE++   E       A    ++ P+ K
Sbjct: 348 PIVWHPAMRRILLTLQAQTEGARVLAGWIGLLLDESEQHPEPAQRARAADLVALLTPVAK 407

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLLEK 460
            +   +      +A+   GG GY+ E  I +  R+S    I  G+     +D V+     
Sbjct: 408 AFLTDLGHRGADDALGVFGGYGYVHEYGIEQQVRDSRIAMIYEGTNQIQAIDLVMRKWLD 467

Query: 461 GTNLFEQLFSTLEQDLGSSGKKV-----ITILRDSIS---LCKEDKGLARFLTEKIALAS 512
                E L   +E +  +   +         LR+ I+   L   D   AR    +  LA 
Sbjct: 468 TPRRIEALLDEMEAEAAACEARADLAIEAAALREQIAAIRLAGIDLHAARAHDAQAVLAV 527

Query: 513 SAAALYRAGMNDIADVF-----LENRFLDNCHSTHCMLHGRFNAAHIID 556
           +  AL+  G   +A  +        R  D   +       RF    ++D
Sbjct: 528 ADDALHGLGHALLAWAWARMARCAERHPDPRAAQRKRELSRFGLTWLMD 576


>gi|333024237|ref|ZP_08452301.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332744089|gb|EGJ74530.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 606

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 104/552 (18%), Positives = 190/552 (34%), Gaps = 80/552 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPA 102
             A +        + + E   +  A+  A   ++ + + P            ++V   P 
Sbjct: 34  ARARYAEHDRATFDAVLELSETLAARHFAPHNKLGDAHEPTFDG--------ERVHVIPE 85

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               L+     GL  +  D S   +   +         +  A +        ++ +A+++
Sbjct: 86  VGEALKVFAEAGLTSAGLDASVGGMQLPRVVTDACFAWFQAANVGTSAYPFLTIGNANLL 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                            SRE   T   PM +      + L+E + G+ +A + ++ +   
Sbjct: 146 LAHG-------------SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAG 192

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPRLLEDGS----- 266
           DG Y L G+K ++S    +       ++LA+  G          F+VP+ L DG      
Sbjct: 193 DGTYRLFGNKMWISGGDHELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGA 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILI 316
            N +    L +K+G R      L F              G L+G+ N     +  M    
Sbjct: 253 RNDVVLAGLNHKMGYRGTTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEA 312

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +   + + +        A+ YAR R                 +I+   ++R +      
Sbjct: 313 RIGVGLGATALGYTGYLHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAY 372

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  A AL+       DE ++  E AA         I+ PI K W  +      + A++  
Sbjct: 373 VEGALALTLYCGRLVDEQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVH 432

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--- 474
           GG GY  E  + + YR++  N I  G+     LD+L    + K       L   +E    
Sbjct: 433 GGYGYTREYDVEQFYRDNRLNPIHEGTHGIHGLDLLGRKAVMKDGAALRLLLGRVEDTAR 492

Query: 475 ---DLGSSGKKVITILRDSISLCKEDKGLARFLTE---KIALASSAAALYRAGMNDIADV 528
                G       T LR++ +        AR   +   + ALA+++  L  AG   +A +
Sbjct: 493 RATSAGGDAATYATSLREAATRLGTV--TARLWQDGDPRTALANASVYLEAAGHVVLAWI 550

Query: 529 FLENRFLDNCHS 540
           +LE         
Sbjct: 551 WLEQLLAAGAGE 562


>gi|317506469|ref|ZP_07964270.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255230|gb|EFV14499.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 380

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 128/357 (35%), Gaps = 25/357 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            L    +  L  +I                      + AQ+    +      +   +   
Sbjct: 43  WLSMGANGFLGTAIPAEYGGGGADDFRFNAILVEEIIRAQVSGVGVTYQEDMTLPYILSF 102

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + W P + + E               + + +TE   G+D+  I +   +  D  
Sbjct: 103 GTEEQKRRWLPAVATGE-------------RILAVAMTEPGAGSDLQGIKTSAVRKGDE- 148

Query: 226 YCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           + ++G K F+S+ M+   ++ A Q E   G   +     +    G    R  +K+G R+ 
Sbjct: 149 WLINGSKIFISNGMNADLVVTAAQTEPGSGAKGITLFALERGMPGFERGRKLDKVGLRAQ 208

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T EL F +        +  V  G    M+ L    L  AI + + + +++   + Y R 
Sbjct: 209 DTAELFFEDVLVPQENVIGEVGKGFAYLMQNLPQERLALAIGAAAAIDLAIETTVEYVRG 268

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +      +  +AD+  + AA  AL  R   +    +  + E       A  TK
Sbjct: 269 RTAFGKPVGKFQNTRFVLADLVAEQAAVRALVDRCVETHLRGELTAAE-------ASATK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  +    V+   ++  GG GY+ E  IA+ Y ++   +I  G+   M   V   L
Sbjct: 322 LYATERQLRVVDRCLQLHGGYGYMLEYPIAQLYLDARVQTIYGGTSEIMKEIVARSL 378


>gi|213968564|ref|ZP_03396707.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
 gi|301383536|ref|ZP_07231954.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13]
 gi|302062586|ref|ZP_07254127.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40]
 gi|302130253|ref|ZP_07256243.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213926852|gb|EEB60404.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1]
          Length = 393

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 130/370 (35%), Gaps = 40/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     F             AR           +MS  S      + 
Sbjct: 54  DIFREMGEVGLLGATIPEEFGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIN 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E+                 GLTE   G+D  A+ ++ + +  
Sbjct: 114 EFGTQAQKEKYLPKLASGEW-------------IGCFGLTEPNHGSDPGAMITRARSVEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 161 GYRLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWAGLSAPVIHGKVGLRA 216

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+   N F        D+    GP         L+SA   +S   +  AE   +  
Sbjct: 217 SITGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTA 270

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R   G  L    ++++ +AD+  +I  A     RL    DE  +       A  
Sbjct: 271 RQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGIA-------AVE 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I K   C  +  +   A + +GG+G  +E  IARH       +   G+ +   L +L
Sbjct: 324 ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-IL 382

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 383 GRAQTGIQAF 392


>gi|302876744|ref|YP_003845377.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307687422|ref|ZP_07629868.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302579601|gb|ADL53613.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 377

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 129/356 (36%), Gaps = 30/356 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+ +    G   ++  + ++ +             +        +L++    +A  +   
Sbjct: 41  LIEKIAEKGYLGAMIPKQYDGMGLDNITLGILNEEFAKGCSSMRNLLTVHGMAALALLRW 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      W  K             M K        LTE R G+D  +I +      D  
Sbjct: 101 GTETQRDTWLNK-------------MAKGEAIGAFALTEPRIGSDAKSIEATAVADGDDY 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 KW     ++D FI+ A+ E +   F+V +        G   + +   +G R++ 
Sbjct: 148 VINGKKKWITMGQIADFFILFAKCEDKPTAFIVEKDRV-----GFSKKPMSGLLGVRASM 202

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYAR 340
             EL   N        +    G       L  LD    SV+   V +A+A     + YA+
Sbjct: 203 IAELTLENCRIPKENLVGR-IGTGLSHVALSCLDYGRYSVACGCVGVAQAALEDSLRYAK 261

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      +    ++++ I ++ ++I AA  L ++     D     S       +   + 
Sbjct: 262 ERQQFNSTINGNQLIQKMITEMVVNIKAARQLYYKAGYLKDICDPDS------IMETWVV 315

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           KY+   M   + ++A++  GG+G   E  + R++R++  N I+ G+     + + N
Sbjct: 316 KYFASTMLTKITSDAIQIHGGNGVSNEYRVERYFRDARVNEIIEGTTQIHEVLIAN 371


>gi|118466999|ref|YP_880344.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118168286|gb|ABK69183.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 382

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A  
Sbjct: 114 PTLAGEKIGSLAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAAGVSLLVVEKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       ++               K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRNVVERQLAGETN------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR+     I  G+   +      LL
Sbjct: 347 ESEVERQYRDMRILGIGGGTTEILTALSAKLL 378


>gi|73955392|ref|XP_857153.1| PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain
           specific, mitochondrial precursor (VLCAD) isoform 5
           [Canis familiaris]
          Length = 563

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 159/417 (38%), Gaps = 75/417 (17%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+                              +D A+I S     
Sbjct: 184 ILLFGTKAQKEKYLPKLA-----------------------------SDAASIRSSAVPS 214

Query: 222 SDG-IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G  Y L+G K ++S+   +D F + A+    +   G     +   + + S  G+ +  
Sbjct: 215 PCGKYYTLNGSKIWISNGGLADVFTVFAKTPVTDAATGAVKEKITAFVVERSFGGVTHGP 274

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F +         NV        K+ ++ L++    ++       
Sbjct: 275 PEKKMGIKASNTAEVYFDSVRVPA---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 331

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A +A+      ++++ ++ + D+  +   
Sbjct: 332 RGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTD-- 389

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ +
Sbjct: 390 ----FQIEAAISKIFGSEAAWKVTDECIQILGGMGFMKEPGVERVLRDLRIFRIFEGTND 445

Query: 449 AMVLDVL--NLLEKG------TNLFEQLFSTLEQDLGSSGKKVIT------------ILR 488
            + L V     ++KG       N  +  F      LG +GK++              I+ 
Sbjct: 446 ILRLFVALQGCMDKGKELSGLGNALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIIH 505

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
             ++   E    A    E+ A    A  L +     + + F+  R  D+    + M+
Sbjct: 506 QELNRSGELTVQA---LEQFATVVEAK-LIKHKKGIVNEQFVLQRLADSAIDLYAMV 558


>gi|293609182|ref|ZP_06691485.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829755|gb|EFF88117.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 402

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 129/367 (35%), Gaps = 35/367 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 60  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 119

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 120 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 166

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 W  +SP++D F++ A+    EG VG   +   + +    GL    +  K+G R+
Sbjct: 167 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGD--IRGFILEKGWEGLSAPAIHGKVGLRA 224

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----Y 338
           + T E+   N F           G          L+SA   ++   +  AE        Y
Sbjct: 225 SITGEIVMDNVFVPEENVFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +IA    ++ R     DE  +  E          
Sbjct: 282 TMDRKQFGRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVE-------GTS 334

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 335 LIKRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRA 393

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 394 QTGIAAF 400


>gi|120405797|ref|YP_955626.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958615|gb|ABM15620.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 386

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 141/370 (38%), Gaps = 29/370 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+++   P    L R++   GL  + +  S        A  +        A    
Sbjct: 26  PHAGEWERIGELP--RELHRKAAEVGLLGAGFPESVGGGGGDGADAVVICEEMHRAGAPG 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G   S   +  ++  ++ +   H              T   P  +      L +TE  GG
Sbjct: 84  GVFASLFTSGIAVPHMIASGDEH-----------LIDTYVRPTLRGEKIGALAITEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS-- 266
           +D+  +T++  K  D  Y L+G K F++S +   +++ A   G  G   +  ++ D    
Sbjct: 133 SDVGHLTTRAVKDGD-CYILNGAKTFITSGVRADYVVTAVRTGGPGAGGISLIVVDKDGP 191

Query: 267 --PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL   R  +K+G RS+ T EL +++     G L+G  N     +    +   +  A
Sbjct: 192 GCSPGLQVTRKLDKMGWRSSDTAELSYTDARVPAGNLVGAENTGFLQIAAAFVSERVGLA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             + S  +  L   + + R R   G  LI +  ++  +A++A  I  A   +  +     
Sbjct: 252 AQAYSSAQRCLDLTVEWCRSRETFGKPLITRQSVQNTLAEMARRIDVARVYTHHVVEREL 311

Query: 382 EAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
             ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR+    
Sbjct: 312 AGETNLIAEVCFAKNTAVDAGEW-------VAHQAVQLFGGMGYMAESEVERQYRDMRIL 364

Query: 441 SILLGSGNAM 450
            I  G+   +
Sbjct: 365 GIGGGTSEIL 374


>gi|319950211|ref|ZP_08024138.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319436115|gb|EFV91308.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 387

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 135/384 (35%), Gaps = 31/384 (8%)

Query: 88  GPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
            P     +  + +P  W   ++     G++       +  +       +R         +
Sbjct: 27  TPSAREVEHADTYPERWIEQMK---QIGIYGLAVPEEYGGMPVSMPCYVRVTEELARGWM 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                M      A+++A   T    + + P++ + E   T             + LTE  
Sbjct: 84  SLAGAMGGHTVVATLLAQFGTEEQKRTYLPRLATGEIRAT-------------MALTEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLED 264
           GG+D+  +++  +   + +       +  ++  S    +L + +         +  +L +
Sbjct: 131 GGSDLQNMSTVARTDGNELVITGAKTFITNARRSGLIALLCKTDPEATPRHRGMSIVLVE 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
             P GL   R   K+G +   T EL F          L G+       +        +  
Sbjct: 191 HGP-GLTVSRDLPKLGYKGVETCELVFDGYRTPADRVLGGEPGRGFAQMMKGLETGRIQV 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++     +L +++ YA+ R   G  +     +   +A++A  + AA  L+   A  +
Sbjct: 250 ASRALGVAAAALEDSLAYAQSRESFGQPIWKHQAVGHHLANMATTLTAARQLTLFAAEKY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EA  A       K +  + A  +  +A+   GG GY  E  I R++R++P  
Sbjct: 310 DAGERCDMEAGMA-------KLFASEAAMQIALDAVRIHGGYGYSTEFDIERYFRDAPLM 362

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            +  G+       + + L     L
Sbjct: 363 IVGEGTNEIQRNVIASQLVARGGL 386


>gi|145223141|ref|YP_001133819.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443598|ref|YP_004076477.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215627|gb|ABP45031.1| butyryl-CoA dehydrogenase [Mycobacterium gilvum PYR-GCK]
 gi|315261901|gb|ADT98642.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 386

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 135/377 (35%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAKHDEEHSFP--YEVVSGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V         ++W P + S                    GLTE  G
Sbjct: 89  AITLEAGVSLGAMPVYRFGNESQKQEWLPLLASG-------------KALGAFGLTEAGG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLVPRLLED 264
           G+D  A  +  +      + ++G K F+++  +D      + A      G   +  +L  
Sbjct: 136 GSDAGATKTTAKSDG-ASWVINGTKQFITNSGTDITKLVTVTAVTGENNGKKEISSILVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   +   NK+G  ++ T  L F +        L     G    ++IL    +  A
Sbjct: 195 VPTEGFTAEPAYNKVGWNASDTHPLSFDDVRVPQENLLGERGRGYANFLRILDEGRIAIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ YA+ R   G  +     +   IA +      A A  +  A    
Sbjct: 255 ALSVGAAQGCVDESVKYAKERQAFGAAIGTYQAIAFKIARMEARAHTARAAYYDAAALML 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   + A+ A+++A        + A     +A +  GG G++ E S+ARHYR+S    
Sbjct: 315 SGKPFKKAASVAKMVA-------SEAAMDNARDATQIFGGYGFMNEYSVARHYRDSKILE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 368 IGEGTTEVQLMLIGREL 384


>gi|302347956|ref|YP_003815594.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
 gi|302328368|gb|ADL18563.1| Acyl-CoA dehydrogenase [Acidilobus saccharovorans 345-15]
          Length = 399

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 139/376 (36%), Gaps = 28/376 (7%)

Query: 93  RWDKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           RW ++E        + +     GL        +      Q     A      A       
Sbjct: 37  RWREIEESNRIQPEIFKAMAEQGLTGVGIPEEYGGQGGGQLMTAIAMEEIARAVPSLAVA 96

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +   A  V    T  + K +               P+ +         TE  GG+D+
Sbjct: 97  IGVNHLFAVPVLEFGTEELKKKYV-------------TPIARGERRGAHANTEPSGGSDV 143

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG---RVGCFLVPRLLEDGSP 267
           A I S+  K +D  Y ++G K F+S+   +D  ++ A+          + +   + +   
Sbjct: 144 AGIQSRAVKENDH-YIINGRKVFISAAGEADYLLVSARTSPPQEGKRWWGITTFVVERDW 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+   +    IG R     E+   N       ++G  N     V        +  A  +
Sbjct: 203 PGVKIGQQFRVIGMRGEQPYEVVLDNVKVPAENVVGKENEGFKVVVTTYDHTRIGIAAQA 262

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   + +  +A++YA +R + G  +++  ++   +AD+ + + A+  L++  A+  D+ +
Sbjct: 263 VGIAQAAFEKAVNYALQRELFGQRIVNFEMIVEKLADMYIRLEASRLLTYWAASLADQGR 322

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     I A + K +  + A  +  +A++  GG G   E  + R+ R++   +I  
Sbjct: 323 PE------YTIAASLAKTFASESAEWIARQAVQIHGGYGVDFETGLERYLRDAIITTIYE 376

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L ++  + +
Sbjct: 377 GTNEVQRLTIVKEMLR 392


>gi|330952465|gb|EGH52725.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 393

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|297180741|gb|ADI16949.1| acyl-CoA dehydrogenases [uncultured SAR406 cluster bacterium
           HF0010_18O13]
          Length = 632

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 130/376 (34%), Gaps = 41/376 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM--SPSVTSASM 161
             L+ +    G         +      +      A         +   +    +   +  
Sbjct: 98  RKLVEQMGELGFLGIDVPEKYGGSEMTKTGMCILAEGISFCGSPSFCTVWNVQTSIGSLG 157

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +         K W P I S E                  GLTE   G+D     + G   
Sbjct: 158 IIWYGNDEQKKKWLPGICSGE-------------KIAAFGLTEPEAGSDATNSKTTGVLS 204

Query: 222 SDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            DG  Y ++G K F+S+   +D FI+  +++G+        ++ +    G    + + K+
Sbjct: 205 DDGKHYIVNGQKIFISNGAWADTFIVALKIDGKFSS-----IVVEKGTPGFDIGKEEKKM 259

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G   ++TV L F++       LLG +    GP      +        ++ GM + +  A+
Sbjct: 260 GMEGSSTVPLYFTDCKVPVENLLGKVGDGAGPAFCGLNIGRFKLGASAIGGMMLGMQHAV 319

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------------- 383
            YA+ R   G  + D   ++  +A  A+      +  + +     EA             
Sbjct: 320 EYAKSRKAFGQSISDFGSIQDKLATSAILTYTLDSTCYSVIGKQTEAINELDKNDPEYYV 379

Query: 384 -KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  + E   A     I K +  + A  +I    +  GG G+IEE  +A+ YR++  N I
Sbjct: 380 KQGNTTEQYIAEN--SIVKVYGSEAAEELIDHCFQIYGGYGFIEEYPMAQAYRDNRINKI 437

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     +     +
Sbjct: 438 WEGTNEINRMLCGRAM 453


>gi|170691314|ref|ZP_02882479.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143519|gb|EDT11682.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 396

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 140/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIYEFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DAIRGFILEKGWKGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AE+  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  I
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGI 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|313231598|emb|CBY08712.1| unnamed protein product [Oikopleura dioica]
          Length = 413

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/427 (16%), Positives = 145/427 (33%), Gaps = 38/427 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYG-----------PGGERWDKVEFHPAWH 104
           K L  + +   S        +  Y    L               P    W+K   +PA H
Sbjct: 8   KSLRAIPKRAESEAVGAWGEI--YGPEHLQMQDSLRKIIEQDINPNVPEWEKAGIYPA-H 64

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++++    G   +     +  +    ++ +  +                   S  +   
Sbjct: 65  EVMKKLGSAGFLGTSHPEEYGGMGLDYSYTVAVSETL------GEIKCGGIPMSIGVQFE 118

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           M TP +      K  S         P         LG++E   G+D+A I +  +   D 
Sbjct: 119 MATPALG-----KFGSETVCEEFLRPSIAGDKVACLGVSEVHAGSDVAQIKTTAKSDGDD 173

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +   +D   +LA             +       G+   +   KIG  S+
Sbjct: 174 YIINGQKMWITNGIQADWCCLLANTSDGPVHKSKSLICVPMDLPGVIRAKKIEKIGMWSS 233

Query: 285 ATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
            T +L F +        +    +G +  M       + +   ++SG+   + E I+Y R 
Sbjct: 234 DTAQLWFEDVRVPKKYIIGEEGSGFIYQMIQFQQERIFAMASAISGLENCINETINYTRE 293

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  ++D   +   +A++  ++    AL +R+   +   +        A  +A + K
Sbjct: 294 RQAFGKSVLDNQYIHFQLAELQTEVELLRALLYRVTAMYVNGED-------ATKLASMGK 346

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-- 459
               ++   V  + ++  GG GY  E  +++ +R+    S+  G+   M+  +  L++  
Sbjct: 347 LKTGRLIREVADKCLQMWGGMGYTLENPVSQQFRDGRLASVGGGADEIMLQIICKLMDIL 406

Query: 460 -KGTNLF 465
            KGT L 
Sbjct: 407 PKGTKLV 413


>gi|296141000|ref|YP_003648243.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029134|gb|ADG79904.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 382

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 136/374 (36%), Gaps = 35/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +   +  +     A  +    L  + Q  A  + +
Sbjct: 30  DEEHSFP--YEVVEQMGQMGLFGLPFPEEYGGMGGDYFALALALEELGRVDQSVAMTVEA 87

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    T    + + P + + E                G GLTE   G+D + 
Sbjct: 88  GVGLGAMPIYKFGTDEQKQKYLPALAAGE-------------SLAGFGLTEPGCGSDASG 134

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV----GCFLVPRLLEDGSPNG 269
             +  +   D  + ++G K F+++  +D   ++           G   +  ++      G
Sbjct: 135 TATTAKLDGD-TWVINGSKQFITNSGTDITSLVTVTAVTGTTPDGRKQISTIIVPSGTPG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM- 328
              +   NK+G  ++ T  L FS+        L        +   L  LD   ++++ + 
Sbjct: 194 FTVEPAYNKVGWNASDTHPLSFSDVRVPSENLLGEEGRGYANF--LSILDEGRIAIAAVA 251

Query: 329 ----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               +  + E++ YA+ R+  G  + +   +  AIA +      +    +  A      K
Sbjct: 252 TGAAQGCVDESVKYAKERNAFGKPIGEFQSIAFAIARMEARAHTSRVAYYEAARLMLAGK 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A+++         + A      A +  GG G++ E  +ARHYR+S    I  
Sbjct: 312 PFKKEAAIAKMI-------SSEAAMDNARMATQIHGGYGFMNEYPVARHYRDSKILEIGE 364

Query: 445 GSGNAMVLDVLNLL 458
           G+    +L +   L
Sbjct: 365 GTTEVQLLLIARSL 378


>gi|160898202|ref|YP_001563784.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363786|gb|ABX35399.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 596

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 86/463 (18%), Positives = 159/463 (34%), Gaps = 61/463 (13%)

Query: 41  SLLVALIANFPSVVHKEL--------ELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGG 91
             L  +       +  E         E L +       +   R  A+   P        G
Sbjct: 13  PPLQDIRFVQQHWLGAEADWRRMPAHEALDQETADMVVEAAGRFCADVLAPLNGPADLQG 72

Query: 92  ERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            R ++  V     +       +  G                Q   + AA   ++A    G
Sbjct: 73  CRLEEGRVRTPDGFPEAYAAFVEAGWPALACAPEAGGQGLPQ--LLDAALHEMLASANHG 130

Query: 150 HLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             M P +   +   L       +   + P I S  +                + LTE + 
Sbjct: 131 WTMYPGILHGAYACLHAHGDAHLRATYLPHIVSGRW-------------LATMCLTEPQA 177

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-VEGRVGCFLVPRL 261
           G+D+  + SQ +   DG Y L G K F+S    D       ++LA+  +   G   +   
Sbjct: 178 GSDLGLLRSQARPRGDGSYSLDGSKIFISGGDQDMSENIVHLVLARLPDAPAGTRGLSLF 237

Query: 262 LEDGS---------PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           L             PN +    ++ K+G + +AT  + F     +L+G  +     +  M
Sbjct: 238 LAPRGIPQDGGGFLPNAIHCDGIEKKMGIKGSATCAMRFEGAQAWLVGQPHQGLAAMFVM 297

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIA 360
                L   +  +    ++   A  YA  R                  +  QP ++R +A
Sbjct: 298 MNSARLHVGLQGLGHAEMAWQLARAYAAERRQMRAQPRPADAQGPADPIALQPAVQRMLA 357

Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           D+ +      A++  +A+  D      +A+ R++  A A ++ P+ K +  +   A+ +E
Sbjct: 358 DLRVWTEGMRAIAGWVAHQLDLAEQAPDAEERAQAHALASLLTPVVKSFFTERGFALASE 417

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           A++  GG GY+ E  I +  R++    I  G+     LD+L  
Sbjct: 418 ALQVFGGYGYVHEYRIEQTLRDARIAMIYEGTNQIQALDLLQR 460


>gi|311743189|ref|ZP_07716997.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313869|gb|EFQ83778.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 388

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 135/380 (35%), Gaps = 32/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLE 147
           P   +WD     P    ++R+    GL        +            A   L  + Q  
Sbjct: 26  PHVAKWDVDHHFPV--DVVRQMGDLGLFGLAAPAEYGGADGDFTSLCVAIEELGRVDQSM 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +      + +    T    + W P + +                  G GLTE   
Sbjct: 84  GVTLQAAVGLGINPILTYGTAEQKERWLPDLVAG-------------RALAGFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQVEGRV-GCFLVPRLLE 263
           G+D  A  ++  +  D     +G K F+++  +D      + A+   R  G   +  ++ 
Sbjct: 131 GSDAGATRTRAARDGDDWVV-NGSKQFITNSGTDITSVVTVTARTGERPDGRPEISAIMV 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
                G   +   +K+G   + T  L F      + GD  +        + L  LD   +
Sbjct: 190 PADTPGFVVEPAYDKLGWHISDTHPLSF--VDARVSGDHLLGEQGRGYAQFLATLDDGRV 247

Query: 324 SVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++S + V   +A       YA  R   G  +  +  +   IAD+A+ + A+ AL++R A 
Sbjct: 248 AISALSVGCIQACLDLCVQYAGERQTFGVPIGTKQGVAFPIADLAVMLEASRALTYRAAA 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D     +      +  A I K +  + A      A +  GG G++EE  +AR YR++ 
Sbjct: 308 LKDGGAPAAA----FKQAASIAKVYATESAVTATRIATQVFGGYGFMEEYPVARFYRDAK 363

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     + +   L
Sbjct: 364 ILEIGEGTSEVQRMLIARGL 383


>gi|322421292|ref|YP_004200515.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
 gi|320127679|gb|ADW15239.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp.
           M18]
          Length = 385

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 124/374 (33%), Gaps = 31/374 (8%)

Query: 92  ERWDKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           ER  + EF    WH         G+       ++  +       +        A  ++G 
Sbjct: 34  EREKRGEFSEEGWHKC----AGFGIPGITMPEAYGGLGLDTMTAVATMEGLGYACQDSGL 89

Query: 151 LMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           + S +    +    +    TP   + + P + +              S+  G  +TE   
Sbjct: 90  IFSLNSHIWTCESPINRFGTPEQRQRYLPGLIAG-------------SLKGGHAMTEPEA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  ++  + +K  D         +  ++P++D  ++ A  + + G   +   + +   
Sbjct: 137 GSDAFSMRCRAEKRGDRYLLNGSKTFITNAPIADLLLVFAVTDRQKGFAGISAFIVEKGF 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMS 324
            G    R    +G R+    E+   +    +   L             +  + +      
Sbjct: 197 TGFSVGRPLEMMGLRTCPLGEVFLEDCEVPVENRLGGEGAGAAIFNSEMEWERSCLFAAH 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M   L E + YAR R   G  +     +   IAD+ + I  +  +  R+A      +
Sbjct: 257 LGAMEKILEECVSYARERQQFGKAIGKCQSVSHKIADMKVRIELSRLMLHRVAGLKAAGQ 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               E+A A       K +  +       +A++  G  GY  E    R+ R++ A  I  
Sbjct: 317 RAPLESAMA-------KLFISESYVQNATDALQIHGAYGYSTEFDFERNLRDAIAGKIYS 369

Query: 445 GSGNAMVLDVLNLL 458
           G+       +   L
Sbjct: 370 GTSEIQRNIIATFL 383


>gi|241662385|ref|YP_002980745.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240864412|gb|ACS62073.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 397

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 128/364 (35%), Gaps = 30/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             AR           +MS  S      +    
Sbjct: 57  REMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFG 116

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ + E+                 GLTE   G+D A++ ++ +K+  G  
Sbjct: 117 SEAQKQKYLPKLVTGEW-------------IGCFGLTEPNHGSDPASMITRAKKVDGGYS 163

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++  ++    G   +   + +    GL    +  K+G R++ T
Sbjct: 164 LSGAKMWITNSPIADVFVVWGKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSIT 223

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+     F     + N+  G          L+SA   ++   +  AEA  +  R     
Sbjct: 224 GEIVLDEVFVP---EENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLD 280

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K
Sbjct: 281 RKQFGRPLAANQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITSIMK 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +L   + G
Sbjct: 334 RNSCGKSLDIARVARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRAQTG 392

Query: 462 TNLF 465
              F
Sbjct: 393 IQAF 396


>gi|325000644|ref|ZP_08121756.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 386

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 126/360 (35%), Gaps = 28/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVA 163
            +L +    GL+          +      +++ A  +            + +  +  ++ 
Sbjct: 37  RILDQCRAMGLYGFAIPEEHGGLGLSSHEEVQLAMEIGWTTPALRSAFGTNNGIAGHVLL 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K+W P++ S E             +    GLTE   G+D +A+ +   +   
Sbjct: 97  EGGTEDQKKEWLPRLASGE-------------ITASFGLTEADAGSDPSALRTIAVRDGA 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +D  ++ A+ +    G   +   L      GL       K+G +
Sbjct: 144 DWVITGSKRYITNAPTADVVMVFARTDPDAAGNRGISVFLVPADAPGLGVGPPDRKMGQK 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAI 336
              T ++            +    G     +I    L    +S++   V +A     E+ 
Sbjct: 204 GALTADVHLDEVRVPAAALVGGVEGLHAGFRIAAKCLAHGRLSIAAGCVGMAARLVREST 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +AR R   G  +    +++  +AD   D  A  A+    A ++D+   R          
Sbjct: 264 EFARTREQGGAPIARFQLVQALVADSVTDHLAGRAMVLEAARAYDDGTDR-------ITG 316

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               KY+  +M   V   A++  GG+GY+ +  + R YR++    I  G+     + +  
Sbjct: 317 PAAAKYFASEMVGRVADRAVQIHGGAGYMSDTPVERFYRDARLFRIYEGTSQIQQVIIGR 376


>gi|297530150|ref|YP_003671425.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3]
 gi|297253402|gb|ADI26848.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3]
          Length = 392

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 122/375 (32%), Gaps = 39/375 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +        H ++A  L    ++    +      SA  + 
Sbjct: 48  KELQLKAKEAGFWGINTPEEYGGANL--GHVMQAIVLM---EVSKTLVPFQFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   K +               P           +TE   G+D   I     K  D
Sbjct: 103 YYANEEQKKKYLI-------------PTINGEKKSCFAMTEPGAGSDTRNIKMTAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKN 277
             + L+G K F++    +D  +++A  +        G   V   + D            +
Sbjct: 150 E-WVLNGEKTFITGGNEADFVMVIAITDKERHQASNGREGVTCFIVDREMG--WRSEPIH 206

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G   +    L F N        LG+L+       +            +V      L  
Sbjct: 207 TMG--PSTPASLIFENVRVPEENILGELHHGYKLGLEWIGYARWVVGARAVGAAERLLQM 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA+ R   G  + ++  ++  IAD A++I AA  L    A + D+ +         R
Sbjct: 265 AIDYAKERVTFGKPIAERQAIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------R 317

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +A + K +   M   V+   M+  GG GY +E  I R YRE+    I  G+     L +
Sbjct: 318 HLASMAKLFGANMGNRVVDRVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLII 377

Query: 455 LNLLEKGTNLFEQLF 469
              L KG     Q  
Sbjct: 378 ARNLIKGHVKLGQFI 392


>gi|229588007|ref|YP_002870126.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|229359873|emb|CAY46726.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
          Length = 600

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 87/478 (18%), Positives = 168/478 (35%), Gaps = 60/478 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A   +      ++ +A+
Sbjct: 76  PEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    T    + +   +    +  T             + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGTDDQKQRFLQPMIDGRFFGT-------------MALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GERNDVLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLVGKPHQGLSCMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R                 +I    +KR +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRLPDSKDPTTAPVSIIQHADIKRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+         R        ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDTTTLETDAERKHAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L   L + G    +QL   + +    + + 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLMAETGAHAQEY 482

Query: 482 KVITILRDSI-SLCKEDKGLARFLTEKIA-------LASSAAALYRAGMNDIADVFLE 531
             ++ LR+ +  L    + +   L   +A       LA+SA  L   G   I   +LE
Sbjct: 483 PSLSPLREPLEQLVNRLQSVTIGLLTDLAHGKVNSSLANSALYLKVFGHTVIGWRWLE 540


>gi|254823450|ref|ZP_05228451.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 382

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +  ++  D  Y ++G K +++S +   +++ A  
Sbjct: 114 PTLAGEKIGSLAITEPGGGSDVGHLRTSAERDGDH-YIVNGAKTYITSGVRADYVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAAGVSLLVVEKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLVGAENSGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVAERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       ++               K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRHVVERQLAGETN------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMT 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR+     I  G+   +      LL
Sbjct: 347 ESEVERQYRDMRILGIGGGTTEILTALSAKLL 378


>gi|240170893|ref|ZP_04749552.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 397

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 129/392 (32%), Gaps = 45/392 (11%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           N P+L              +  A    +R     GL   +    +  +            
Sbjct: 32  NAPELERADT---------YPQAIVDQMR---ALGLFGLMISEEYGGLGESLLTYALCVE 79

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                 +    +++     A M+    T    + + P++ + E                 
Sbjct: 80  ELARGWMSVSGVLNTHFIVAYMLRQHGTDEQQQRFLPRMATGECRG-------------A 126

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE--GRVGCF 256
             ++E   G+D+AAI ++ ++   G Y + G K +L++  S   + +L + +        
Sbjct: 127 FSMSEPELGSDVAAIRTRARRDPGGDYLIDGQKMWLTNGASSTLVAVLVRTDEGAAKPHR 186

Query: 257 LVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGP 308
            +   L +          GL      +K+G +   T EL F          L      G 
Sbjct: 187 NLTAFLIEKPTGFGEVAPGLMIPGKIDKLGYKGIDTTELIFDGYRAPADDILGRVPGQGF 246

Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
            + M  +    ++ A  +      +   A+ YA++RH  G  + +   +   +A++A  +
Sbjct: 247 FQMMDGIEVGRVNVAARACGVAIRAFELAVRYAQQRHTFGKPIAEHQAIAFQLAEMATKV 306

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  +    A   D  +     A  A+ +A        +    V  ++    GG GY  
Sbjct: 307 EAAHLMMVNAARLKDSGERNDVAAGMAKYLA-------SEYCSEVTQQSFRIHGGYGYST 359

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              I R  R++P   I  G+       +   L
Sbjct: 360 AYEIERLMRDAPFLLIGEGTSEIQKSIISKRL 391


>gi|146303185|ref|YP_001190501.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701435|gb|ABP94577.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 402

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 137/383 (35%), Gaps = 36/383 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R ++    P    + +++   GL       ++            A           
Sbjct: 35  PNVQRIERENSIPD--EIYQKAREMGLMGVGIPEAYGGQGGDMMMTTIANEELSRVSPAF 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +    + V +  T    K + P             P+ +  V      TE   G
Sbjct: 93  MVRIGANHLFTTPVLIFGTEEQKKKYIP-------------PVARGEVFAAHANTEPGAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVG----CFLVPRLLE 263
           +D+A I +  +K  +  + L+G K+F++     +F+++ A+             +   + 
Sbjct: 140 SDVAGIKTTARKEGN-KWILNGRKYFITGSDKASFLVVSARTSPPPSKKERWKGLTFFIV 198

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAI 322
           +    G+      N +G R     E+   N       + NV     E  K+     D   
Sbjct: 199 ERDWPGVKIGSKINVMGLRGEQPNEVILDNVEVP---EENVLGKVDEGFKVAVTTYDRGR 255

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + V+   V +A+     A +Y+ +R      LI    +   ++D+   + +A  L++  A
Sbjct: 256 VGVAAQAVGIAQGAFERAFNYSLQRQAFERPLISFEGIAFKLSDMLAHLESARLLTYWAA 315

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              ++  +       A   A + K    ++A  V + A++  GG+G   +  + R+ R++
Sbjct: 316 TLAEKNHN------LAVTAASLAKMIATEVAEQVSSLAIKIHGGAGVEVQTGVERYLRDA 369

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
              +I  G+ +   L V   L +
Sbjct: 370 MITTIYEGANDIQRLMVARDLVR 392


>gi|146309443|ref|YP_001189908.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145577644|gb|ABP87176.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 392

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 77/370 (20%), Positives = 132/370 (35%), Gaps = 40/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +    ++             AR           +MS  S      + 
Sbjct: 53  KIFREMGETGLLGATIPEAYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPIN 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + PK+ S EY                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGNEATKQRYLPKLASGEY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 160 GYRLTGSKMWITNSPIADVFVVWAKDDAGE----IRGFVLEKGWQGLSAPAIHGKVGLRA 215

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+   N F        D+    GP         L+SA   +S   +  AE   +  
Sbjct: 216 SITGEIVMDNVFCPEENAFPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTA 269

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     RH  G  L    ++++ +AD+  +I  A     RL    DE  +       A  
Sbjct: 270 RQYVLDRHQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVE 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +L
Sbjct: 323 ITSIMKRNSCGKALDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-IL 381

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 382 GRAQTGIQAF 391


>gi|91781939|ref|YP_557145.1| putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91685893|gb|ABE29093.1| Putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 396

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 140/395 (35%), Gaps = 36/395 (9%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKI 135
           A Y   +L        R +K +       + R     GL        +        A+ +
Sbjct: 31  AAYAQDKLQPRVLEAFRHEKTDI-----EIFREMGELGLLGPTIPEQYGGPGLNYVAYGL 85

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A  +  +       +   S      +    +    + + PK+ + E+            
Sbjct: 86  IAREVERVDSGYRSMMSVQSSLVMVPIHAFGSEAQKQKYLPKLATGEW------------ 133

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
                GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A++E   G 
Sbjct: 134 -IGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVWAKLE-ENGK 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL    + +K+G R++ T E+     F          +G        
Sbjct: 192 DAIRGFILEKGWRGLSAPTIHSKVGLRASITGEIVLDEVFVPEENRFPEVSGLR---GPF 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AEA  +  R     R   G  L    ++++ +AD+  +I    
Sbjct: 249 TCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 308

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               RL    DE  +       A  +  I K   C  A  +   A + +GG+G  +E  +
Sbjct: 309 QGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 361

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ARH       +   G+ +   L +L   + G   F
Sbjct: 362 ARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|126436799|ref|YP_001072490.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
 gi|126236599|gb|ABN99999.1| Isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS]
          Length = 385

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 124/362 (34%), Gaps = 27/362 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL+ +    G+      + +                     +     M      A ++  
Sbjct: 39  ALIDQMKQMGIFGLAIPQPWGEANVSVPCYAAVTEELARGWMSLAGAMGGHTVVAKLLLT 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + P++ + +   T             + LTE  GG+D+ A+T+  ++    
Sbjct: 99  YGTEEQKDRYLPRMATGDIRAT-------------MALTEPGGGSDLQAMTTHARRDGGH 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S    ++ + +         V  LL +  P G    R   K+G +
Sbjct: 146 YVINGAKTWITNARRSQLIALMCKTDRTAVPAHRGVSILLVEKGP-GFEVSRDLPKLGYK 204

Query: 283 SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
              + EL F +        L      G  + M+ L    +  A  ++   R +L +++ Y
Sbjct: 205 GVESCELSFDDFRVPETALLGSEEGHGFAQMMRGLEIGRIQVASRALGVARAALEDSLRY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +     +   +AD+A  + AA  L    A  ++       EA  A     
Sbjct: 265 VQERETFGKPIWQHQSIGNYLADMATRLTAARQLVQFAARRYESGDRADMEAGMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  +  +A+   GG GY  E  + R++R++P   +  G+       +   L
Sbjct: 320 --KLFASETAMQIALDAVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIAREL 377

Query: 459 EK 460
            +
Sbjct: 378 IR 379


>gi|158314819|ref|YP_001507327.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110224|gb|ABW12421.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 385

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                +    G         +       +HK  A     + +       S    S  +  
Sbjct: 40  REFYYKLAKLGSFGIEVPEEYGG-AGISSHKYTAVETEEITRAGVSFGGSNVHVSLCLPY 98

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L+   TP   + W P   + E                 + +TE   G+D+A + +  +  
Sbjct: 99  LLNLGTPEQKRRWLPGFVAGE-------------SMFAIAMTEPGTGSDLAGMRTTAKLS 145

Query: 222 SD-GIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLK 276
            D   Y L+G K F++  + +D  I+ A+          F +  L+ D    G    R  
Sbjct: 146 EDRSHYVLNGAKTFITGGVHADQVIVCARTASPIDTDRRFGISLLVVDTRSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R + T EL F +       LLG+ N     +        L  A  + +    ++ 
Sbjct: 206 DKLGLRVSDTAELAFQDVKVPVENLLGEENAGFYYLGQNLPQERLVIAYGAYAQAAAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A HY + R + G  L      K  +A    ++ AA A++ R   + D  +  + EAA A
Sbjct: 266 LAKHYVQERKIFGQPLSSFQNTKFELAACQAEVDAAQAVADRALEAHDANELTAAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C + A  VI   ++  GG G+I E  IAR Y ++  N I  G+   M L 
Sbjct: 326 -------KLFCTETAHRVIDRCLQLHGGYGFINEFPIARLYADNRVNRIYGGTSEVMKLI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|288918624|ref|ZP_06412973.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288350024|gb|EFC84252.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 403

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 137/392 (34%), Gaps = 44/392 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+   ++    FEP           +        
Sbjct: 28  PAASEWDEREETP--WPIIQEAAKIGLYNFDTLSTLWFEPTGLSLP---ILSEELFWGDA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G  +  +  + + +A   T     +W P  F    DP                ++E  
Sbjct: 83  GIGMSIMGTSLAVAGIASSGTLEQVGEWVPACFGDAADP----------KVAAYCVSEPH 132

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D++++  + +     D         W  +  +++  +++A V+  +        +  
Sbjct: 133 AGSDVSSMRVRARYDEATDEWVLNGQKAWITNGGIANVHVVVASVDPALRARGQASFVVP 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD----- 319
               GL   R   K+G R++ T ++   +        L      +++   L         
Sbjct: 193 PGTPGLSATRKIKKLGLRASHTADVFLDDVRVPGRCLLG-GKEKLDERLALAREGTRSAG 251

Query: 320 -------------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                            +V   R +   A+ YAR R   G  +I    +  A+AD+ ++I
Sbjct: 252 QTALATFEISRPTVGAQAVGIARAAYEYALDYARGREQFGRPIITNQAVSFALADMRMEI 311

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A           E  +      ++K    ++A     +A++ +GG+GY  
Sbjct: 312 DAARLLIWRAAWM------GRNEREFTAGEGSMSKLKAGEVAVWATEKAVQILGGAGYSR 365

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR++   +I  G+     L V   +
Sbjct: 366 EHPVERMYRDAKIYTIFEGTSEIQRLVVARAI 397


>gi|237801818|ref|ZP_04590279.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331024677|gb|EGI04733.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 393

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE        + A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEG-------SAAVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 LARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|120435399|ref|YP_861085.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117577549|emb|CAL66018.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 602

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 82/443 (18%), Positives = 159/443 (35%), Gaps = 47/443 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            ++R++   G         ++ +       +        A    A    + +      + 
Sbjct: 68  EIMRKAGELGFLGVSVPEEYDGLGMGFVSTMLVCDYISGATGSIATAFGAHTGIGTMPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + PK+ + E+                  LTE   G+D  +  ++     D
Sbjct: 128 LYGTEEQKKKYVPKLATGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSDD 174

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y +SG K ++S+   ++ FI+ A++E      +   ++E+   NG+ +   + K+G 
Sbjct: 175 GKHYSISGQKMWISNAGFANVFIVFARIEDDK--NITGFIVENDKENGITFGEEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ F+ T   +   L     G    M  L    +  A  S+   R     ++ Y
Sbjct: 233 HSSSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGRIKLAAASLDAQRRVTDLSVKY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAA------ 391
           A  R      +     +K  +A++A       A S+R A +  D    R EE A      
Sbjct: 293 ANDRVQFDTPISKFGAIKSKLAEMATSAYVGEAASYRAAKNIEDRINLRLEEGASHSEAE 352

Query: 392 -----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   I   I K  C +       E ++  GG G+  +  +   +R++    I  G+
Sbjct: 353 LKGVEEYAIECSILKVACSEDVQNCADEGIQVYGGMGFSADTPMESAWRDARIARIYEGT 412

Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-------DSISLCKEDKG 499
                +  + +L K      +        LG + K    +         D   L  E+K 
Sbjct: 413 NEINRMLSVGMLVK------KAMKGHVDLLGPATKVADELTGIPSMDKPDYSELFAEEKE 466

Query: 500 LARFLTEKIALASSAAALYRAGM 522
           +   L +K+ L  + +A+ + G 
Sbjct: 467 MVAKL-KKVFLMVAGSAVQKFGP 488


>gi|300778334|ref|ZP_07088192.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503844|gb|EFK34984.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 591

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/480 (16%), Positives = 180/480 (37%), Gaps = 59/480 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMV 162
             +R+    G+        +  +          A  YL       A    + +      +
Sbjct: 61  ETMRKLGEMGMLGIAVPEEYGGLGM-GFVTTMLACDYLSGTTGSLATAYGAHTGIGTLPI 119

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    K + P + +              +      LTE   G+D  +  ++ +   
Sbjct: 120 VLYGTEEQKKKYLPDLATG-------------TKFGAYCLTEPDAGSDANSGKTRAKLSE 166

Query: 223 DGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS----PNGLCYQRLK 276
           DG  Y ++G K ++S+   +D F + A+++       +   + + S    P  L +   +
Sbjct: 167 DGKHYIINGQKMWISNAGFADTFTLFAKIDDDK---NITGFVINKSELENPESLTFGEEE 223

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R+++T ++ F++       LLG+ N       +   +  +  A   +   R  L 
Sbjct: 224 HKLGIRASSTRQVFFNDMKIPVENLLGERNNGFKIALNALNVGRIKLAAACLDAQRRILN 283

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            +I Y+  R   G  +     +++ IA++A  +  + A S+R A +  +       A  +
Sbjct: 284 HSIQYSNERKQFGVSISTFGAIRKKIAEMATGVFVSEAGSYRAAKNIQDKIDELVAAGLS 343

Query: 394 RIMA------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              A             I K +   +A     E ++  GG G+ E+  +   +R+S  + 
Sbjct: 344 HQEAELKGVEEFAVECSILKVFVSDLAQHTADEGIQVYGGMGFSEDTPMEAAWRDSRISR 403

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGL 500
           I  G+     L  + +L K       +   L+          + I ++ + +   E    
Sbjct: 404 IYEGTNEINRLLAVGMLIK-----RAMKGELD-----LLSPAMAISKELMGIPSFEVPDY 453

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           + F++E+ A+ ++   ++      ++   L+   +D     H +L    NA+ I++ +Y+
Sbjct: 454 SEFMSEEKAIIANLKKVFLM----VSGAALQKYMMDIEKQQHLLL----NASEILNQIYM 505


>gi|296208290|ref|XP_002751027.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Callithrix jacchus]
          Length = 385

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 32/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+RR+   GL  +    +   +                        +  +      V + 
Sbjct: 41  LIRRAWELGLMNTHIPENCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGEMPVIIA 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
              +  K +  ++              +  +     +TE   G+D+AAI ++ +K  D  
Sbjct: 101 GNDQQKKKYLGRMT-------------EEPLMCAYCVTEPGAGSDVAAIKTKAEKKGDEY 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+ +              + +    G+   R +  +G R
Sbjct: 148 IINGQKMWITNGGKANWYFLLARSDPDPQAPANKAFTGFIVEADTPGVQIGRKELNMGQR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSLAEAI 336
            + T  + F +         NV  G     KI +   D         +V   + +L EA 
Sbjct: 208 CSDTRGIVFEDVKVP---KENVLIGEGAGFKIAMGAFDRTRPAVAAGAVGLAQRALDEAT 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +L +   +   +A++ + +  A     R A   D  +  +         
Sbjct: 265 KYALERKTFGKLLAEHQAVSFILAEMVMKVELARMSYQRAAWEVDSGRRNT-------YY 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A I K +   +A  +  +A++  GG+G+  E  +    R++    I  G+     + V  
Sbjct: 318 ACIAKAFEGDIANQLARDAVQIFGGNGFNTEYPVENIMRDAKIYQIYEGTAQIQRVIVAR 377


>gi|318061797|ref|ZP_07980518.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318076677|ref|ZP_07984009.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
          Length = 606

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 103/552 (18%), Positives = 192/552 (34%), Gaps = 80/552 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPA 102
             A +        + + E   +  A+  A   ++ + + P            ++V   P 
Sbjct: 34  ARARYAEHDRATFDAVLELSETLAARHFAPHNKLGDAHEPTFDG--------ERVHVIPE 85

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               L+     GL  +  D S   +   +         +  A +        ++ +A+++
Sbjct: 86  VGEALKVFAEAGLTSAGLDASVGGMQLPRVVTDACFAWFQAANVGTSAYPFLTIGNANLL 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                            SRE   T   PM +      + L+E + G+ +A + ++ +   
Sbjct: 146 LAHG-------------SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAG 192

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPRLLED-----GS 266
           DG Y L G+K ++S    +       ++LA+  G          F+VP+ L D     G+
Sbjct: 193 DGTYRLFGNKMWISGGDHELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDDDGGIGA 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILI 316
            N +    L +K+G R      L F              G+L+G+ N     +  M    
Sbjct: 253 RNDVVLAGLNHKMGYRGTTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEA 312

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +   + + +        A+ YAR R                 +I+   ++R +      
Sbjct: 313 RIGVGLGATALGYTGYLHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAY 372

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  A AL+       D+ ++  E AA         I+ PI K W  +      + A++  
Sbjct: 373 VEGALALTLYCGRLVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVH 432

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--- 474
           GG GY  E  + + YR++  N I  G+     LD+L    + K       L   +E    
Sbjct: 433 GGYGYTREYDVEQFYRDNRLNPIHEGTHGIHGLDLLGRKAVMKDGAALRLLLGRVEDTAR 492

Query: 475 ---DLGSSGKKVITILRDSISLCKEDKGLARFLTE---KIALASSAAALYRAGMNDIADV 528
                G       T LR++ +        AR   +   + ALA+++  L  AG   +A +
Sbjct: 493 RATSAGGDAATYATSLREAATRLGTV--TARLWQDGDPRTALANASVYLEAAGHVVLAWI 550

Query: 529 FLENRFLDNCHS 540
           +LE         
Sbjct: 551 WLEQLLAAGAGE 562


>gi|217968860|ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T]
 gi|217506187|gb|ACK53198.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T]
          Length = 395

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 130/361 (36%), Gaps = 35/361 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL  +     +             AR           +MS  S      + 
Sbjct: 55  AIFREMGELGLLGATIPEQYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIN 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 EFGTEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMITRARKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G        W  +SP++D F++ A+ + G++  F++     +    GL    +  K+G R
Sbjct: 162 GFSLSGSKMWITNSPIADVFVVWAKDDEGQIRGFIL-----EKGWKGLSAPAIHGKVGLR 216

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----- 337
           ++ T E+     F           G          L+SA   ++   +  AEA +     
Sbjct: 217 ASITGEIVMDEVFVPEENAFPTVRGLK---GPFTCLNSARFGIAWGALGAAEACYETARQ 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R+  G  L    ++++ +AD+  +I        R+    DE  +  E       + 
Sbjct: 274 YTMDRNQFGRPLAANQLIQKKLADMLTEITLGLQAVLRVGRMKDEGIAPVE-------IT 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   
Sbjct: 327 SIIKRNSCGKALDIARMARDMLGGNGISDEYPVARHLVNLEVVNTYEGTHDVHALILGRA 386

Query: 458 L 458
           +
Sbjct: 387 I 387


>gi|163857879|ref|YP_001632177.1| glutaryl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261607|emb|CAP43909.1| glutaryl-CoA dehydrogenase [Bordetella petrii]
          Length = 397

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 126/363 (34%), Gaps = 36/363 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRV 170
             GL  +     +             AR           +MS  S      +    +   
Sbjct: 61  ELGLLGATIPTEYGGAGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGSEAQ 120

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+ S E+                 GLTE   G+D   + ++      G      
Sbjct: 121 KQKYLPKLASGEW-------------IGCFGLTEPNHGSDPNGMETRAVLTGSGYKLSGN 167

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+  G      +   + +    GL    +  K+G R++ T E+ 
Sbjct: 168 KMWITNSPIADVFVVWAKCVGGDYDGKIRGFILEKGMKGLSAPAIHGKVGLRASITGEIV 227

Query: 291 FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----R 342
                     +L D++   GP         L+SA   ++   +  AEA  +  R     R
Sbjct: 228 MDEVEVSAEQMLPDVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDR 281

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K 
Sbjct: 282 KQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITSIMKR 334

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G 
Sbjct: 335 NSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGI 393

Query: 463 NLF 465
             F
Sbjct: 394 QAF 396


>gi|218781113|ref|YP_002432431.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762497|gb|ACL04963.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 602

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/442 (17%), Positives = 167/442 (37%), Gaps = 55/442 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V+ H     +++ +   G   + +   F+              ++  A          + 
Sbjct: 72  VKVHADVKKIMKEAGEGGWISATFPIEFDGGQLPTMLNCATHHMFGAANYSGSVYPGLTS 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A ++    +  +   + P +   ++  T             + LTE + G+ +A IT+
Sbjct: 132 GAAKLITSFGSKELIDTYVPNMLDGKWQGT-------------MALTEPQAGSSLADITT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLEDGSP--- 267
                 DG Y + G K F+S+   D       +MLA++EG   G   +   +        
Sbjct: 179 TAYPQEDGSYKIKGQKVFISAGDHDGVENIVHLMLAKIEGAPPGVKGISLFVAPKYRPTA 238

Query: 268 ------NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
                 N +   ++ +K+G R     EL   +     G+L+G  +     +  M     L
Sbjct: 239 DGKLEYNDIAVSQVFHKMGYRGAPITELAIGDKGECVGWLVGKPHHGLKYMFQMMNGARL 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIA 367
           D    + S    +   ++ YA++R     +           +I+   +KR +      + 
Sbjct: 299 DVGNAATSIACAAYYASLDYAKQRPQGRKLGQKDLSKPQVSIIEHADVKRMLLQQKAIVE 358

Query: 368 AATALSFRLANSFD--EAKSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            + +L  +     D   A +  EEA        I+ PI K +  +M     + A++C+GG
Sbjct: 359 GSLSLILQCHKYEDLETAAADPEEAEKYNLLCEILTPIAKTYPSEMGIISTSNAIQCLGG 418

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            GY ++  + ++YR+   + I  G+     +D+L   ++      F+     +E+ L  +
Sbjct: 419 YGYCQDFPVEQYYRDIRIHPIHEGTTGIQGMDLLGRKVVMLEGKAFKLFKEEMEKTLVMA 478

Query: 480 G-----KKVITILRDSISLCKE 496
                 K+   +LRD+++  +E
Sbjct: 479 EESDVYKEYAGLLRDALADIEE 500


>gi|313500924|gb|ADR62290.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 600

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 87/502 (17%), Positives = 167/502 (33%), Gaps = 77/502 (15%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            + E  P     +   +  G   +  D     +       
Sbjct: 58  RKADENEPRYVD--------GRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          ++ +A+++    +    + +   +    Y  T        
Sbjct: 110 QACFAHFQAANAGTTAYPFLTMGAANLIESFGSDEQKRLFLQPMIDGRYFGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ- 248
                + LTE   G+ +A I ++ +   DG Y L G+K F+S    +       ++LA+ 
Sbjct: 162 -----MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKL 216

Query: 249 VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
            +   G   +   +            G  N +    L +K+G R   +  L F +     
Sbjct: 217 PDAPPGVKGISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V     S   ++ YAR+R   G         
Sbjct: 277 GYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYASYLYSLEYARQRPQ-GRLPDSKDPL 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMA 397
                +I    +KR +      +  A  L    A  FD+ +      SR++  A   ++ 
Sbjct: 336 SPAVPIIAHTDVKRMLLTQKAYVEGAFDLGLYAARLFDDTQTANDETSRNQAQALLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PVVKSWPSTFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLG- 454

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSA- 514
                         L Q+ G+  K++I ++  +         L   R   E++       
Sbjct: 455 ------------RKLAQNQGAGLKQLIRLIATTGERASHHPELDPLRQPLEQLVNRLQGV 502

Query: 515 --AALYRAGMNDIADVFLENRF 534
             A L       +A     +  
Sbjct: 503 TLALLGDMAQGKVAGALANSAL 524


>gi|148550023|ref|YP_001270125.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148514081|gb|ABQ80941.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 600

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 85/502 (16%), Positives = 164/502 (32%), Gaps = 77/502 (15%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            + E  P     +   +  G   +  D     +       
Sbjct: 58  RKADENEPRYVD--------GRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          ++ +A+++    +    + +   +    Y  T        
Sbjct: 110 QACFAHFQAANAGTTAYPFLTMGAANLIESFGSDEQKRLFLQPMIEGRYFGT-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ- 248
                + LTE   G+ +A I ++ +   DG Y L G+K F+S    +       ++LA+ 
Sbjct: 162 -----MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKL 216

Query: 249 VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
            +   G   +   +            G  N +    L +K+G R   +  L F +     
Sbjct: 217 PDAPPGVKGISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR+R   G         
Sbjct: 277 GYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQ-GRLPDNKDPH 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMA 397
                +I+   +KR +      +  A  L    A  FD+  + ++E           ++ 
Sbjct: 336 SPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENTRKLAQDLLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLG- 454

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--ARFLTEKIALASSAA 515
                         L Q  G+  K++I ++  +         L   R   E++A      
Sbjct: 455 ------------RKLAQHNGAGLKQLIRLIATTCERASHHPNLDPLRQPLEQLANRLQGV 502

Query: 516 ALY---RAGMNDIADVFLENRF 534
            L          +A     +  
Sbjct: 503 TLVLLGDLAHGKVAGALANSAL 524


>gi|116327391|ref|YP_797111.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331995|ref|YP_801713.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120135|gb|ABJ78178.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125684|gb|ABJ76955.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 563

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 113/523 (21%), Positives = 212/523 (40%), Gaps = 43/523 (8%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH--------KELEL 60
           +  +NQ   P  + F ++      G N Y  D +L AL+  +             + L  
Sbjct: 2   QYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIG 61

Query: 61  LGEYVLSCTAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
            G  V      EL   ++      ++  Y   G R D V +        + S   G+   
Sbjct: 62  YGALVGG-VLDELTEASHKEGKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNL 120

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWA 175
            +  S++          R A  YL  Q   G +  P   +  M+ ++    TP     + 
Sbjct: 121 NYHSSWK---HPFTDLHRYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTPEQKDKYL 177

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
             + + E   ++           G  +TE+ GG++++A  +  +K  +G + L+G KWF 
Sbjct: 178 S-LVAGEGSDSH--------FMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFC 228

Query: 236 SSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           S+P  D ++  A+VE    +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ +  
Sbjct: 229 SNPG-DLWVTTARVEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDG 287

Query: 294 TFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LG        +    I I  L  ++ +    R +  EA  YA+ R   G  +++ 
Sbjct: 288 VEAEALGRPAHGIANLMKYVIGISRLHVSLAASGISRRAWMEAYEYAKFRTAYGSKILEF 347

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             + + ++D  L   A     FR  ++ +  K   E      I+AP+ KY C   +  + 
Sbjct: 348 SSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGE------ILAPLLKYKCSATSTEIT 401

Query: 413 AEAMECIGGSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             ++  +GG+G + +  ++ R + +S  N    G+   +   VL   ++   + +  F  
Sbjct: 402 YNSILVLGGNGIVGDFSALPRLHNDSIINETWEGTHLLLSEHVLRGFKRE-KVAKAFFRY 460

Query: 472 LEQ----DLGSSGKKVITILRDSISLCKEDK-GLARFLTEKIA 509
           +E+        + +K   +L++ +     ++  L R     +A
Sbjct: 461 VEEITDSKAAETIRKKSALLQELLDNSSSEELDLNRIYIADLA 503


>gi|297154276|gb|ADI03988.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 125/346 (36%), Gaps = 31/346 (8%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +   +    +     ++A              MS    +A  +    T      WA  I
Sbjct: 57  PYPEQYGGGEQPYEVYLQALEELAARWAAVAVAMSVHTLAAFPLLTFGTDAQRGRWADDI 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            S               +  G  L+E + G+D AA+T +  K +DG        W     
Sbjct: 117 LSG-------------RLIGGYSLSEPQAGSDAAALTCRADKDTDGYRINGAKAWITHGG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +  + + A+     G   +   L  G  +GL + R + K+G  +  T    + N    L
Sbjct: 164 EAGFYALFARTSP--GSDGISCFLAPGHTDGLTFGRPEEKMGLHAIPTTAAFWDNA---L 218

Query: 299 LGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQ 352
           L    +     + ++I    LDS  + ++     LA+A   A       R   G  +ID 
Sbjct: 219 LDPDRLIGREGQGLQIAFSALDSGRLGIAACATGLAQAALDAAVAYAHERTAFGRKIIDH 278

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+A  + +A A     A   D  +  S +A+ A+++A          A  V 
Sbjct: 279 QGLGFLLADMAAAVDSARATYLDAARRRDAGRPYSRQASVAKLIA-------TDAAMKVT 331

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A++  GG GY  +  + R+ RE+    I  G+     L +   L
Sbjct: 332 TDAVQVFGGYGYTRDYPVERYMREAKIMQIFEGTNQIQRLVISRRL 377


>gi|94311535|ref|YP_584745.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93355387|gb|ABF09476.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 382

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 136/369 (36%), Gaps = 26/369 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+ +  P    +L+     G            +   Q            A L    ++
Sbjct: 30  RHDQEKTFP--FEILKGLAQFGYIGGRLSEEQGGMGLDQLTWAMMMEEAGYAWLSLRTIL 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +    + +A + TP     +   + + E               +   ++E   G++IA
Sbjct: 88  NITNGPIAKLAAVGTPDQKTRFLDPLLACERK-------------VFTAISEPGTGSNIA 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            I ++     D         W  +   +D  I++A+         +   L +   +    
Sbjct: 135 QIQTRADLKGDHYVLNGRKLWITNGAFADFGIVVARTYSDNCEGQLSTFLVEREVSPYEV 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMR 329
           +R+ + +  RS  T EL F N        L    G ++ M        ++ A+ +V   +
Sbjct: 195 RRV-DTMVLRSTGTAELGFDNVRVPRENLLGEEGGALKRMLQGLDGARVNIAMGAVGAAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A  YA+ R   G  +    ++++ I D+ + + AA AL +R A + D  +     
Sbjct: 254 CALDLATDYAKTRTQFGRAIGSFQLVQKMIVDMTIRVEAARALGYRAAMALDRGEDT--- 310

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R+ A I K +  + A  V + A++  GG GY  +  I R +R++   +I  G+   
Sbjct: 311 ----RVSASIAKLYATEAAHEVASMALQVHGGLGYATDYPIERIFRDTRGGTIPEGTTEV 366

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 367 QTLIVGREI 375


>gi|330880073|gb|EGH14222.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 393

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 143/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A         L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QGKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPVIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|170719703|ref|YP_001747391.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169757706|gb|ACA71022.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 600

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 93/505 (18%), Positives = 177/505 (35%), Gaps = 70/505 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+            + E  P     +   +  G   +  D     +       
Sbjct: 58  RKADENEPRYVD--------GRAELIPEVKPAVDAFLKAGFLNANRDFEVGGMQLPSLVS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          ++ +A+++    +      +               PM + 
Sbjct: 110 QACFAHFQAANAGTTAYPFLTMGAANLIESFGSDEQKHLFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ +A I ++ +   DG Y + G+K F+S    +       ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLADIRTRAEPAGDGSYRIKGNKIFISGGDHELSENIVHMVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G R   +  L F +     
Sbjct: 217 PDAPPGVKGISLFIVPKYLVNQDGSCGGRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G  +     +  M     +   + +V         ++ YAR+R   G         
Sbjct: 277 GYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQ-GRLPDSKDPL 335

Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMA 397
                +I+   +KR +      +  A  L    A  FD+ +      +R +  A   ++ 
Sbjct: 336 SPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTADGESARQQAQALLDLLT 395

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L  
Sbjct: 396 PIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLGR 455

Query: 457 -LLEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKI----- 508
            L++      +QL   +    +  S    +  + +    L    + +   L   +     
Sbjct: 456 KLVQHNGAGLKQLIRLIASTGERASHHPNLDALRQPLEQLVTRLQAVTLGLLGDLAHGQT 515

Query: 509 --ALASSAAALYRAGMNDIADVFLE 531
             ALA+SA  L   G   I   +LE
Sbjct: 516 AGALANSALYLKAFGHCVIGWRWLE 540


>gi|187477404|ref|YP_785428.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115421990|emb|CAJ48512.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 397

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 143/407 (35%), Gaps = 43/407 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A    Y   +L      G R +K    PA  A +      GL  +     +   
Sbjct: 24  RMVRDAAHA--YAQDKLATRVLEGFRHEK--TDPAIFAEMG---ALGLLGATIPSEYGGA 76

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                     AR           +MS  S      +    +    + + PK+ + E+   
Sbjct: 77  DLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEEQKRKYLPKLAAGEW--- 133

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D A + ++  KI  G        W  +SP++D F++ 
Sbjct: 134 ----------IGCFGLTEPNHGSDPAGMETRAVKIDGGYKLSGAKMWITNSPIADVFVVW 183

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303
           A+  G      +   + +    GL    +  K+G R++ T E+           ++  ++
Sbjct: 184 AKCVGGEFDGKIRGFILEKGMKGLTAPAIHGKVGLRASITGEIVMDEVEISDAQMMPGVS 243

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRA 358
              GP         L+SA   ++   +  AEA  +  R     R   G  L    ++++ 
Sbjct: 244 GLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKK 297

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +   A + 
Sbjct: 298 LADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARVARDM 350

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 351 LGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 396


>gi|89902271|ref|YP_524742.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347008|gb|ABD71211.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 388

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 142/400 (35%), Gaps = 23/400 (5%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +L    + L   A      L    P    W++    P    L R +   G     +  +
Sbjct: 5   EILDEDVRLLEDAARRFA--LSEIAPHLNDWEEAGEFP--RRLYRHAAELGWLALGYPEA 60

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                     +        M    A    S  + +      +  P + +  +  +     
Sbjct: 61  LGGTPSPWHLRN------AMTVALARFGGSGGLMAGLFSHNIGLPPLIRHGSAAL----- 109

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDA 242
                 P+ +      L +TE  GGTD++A+ +  +   D  Y + G K F++S M +D 
Sbjct: 110 QLEVVPPVLRGEKIAALAITEPGGGTDVSALRTTARLEGDE-YVVDGDKIFITSGMRADW 168

Query: 243 FIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
           F +  + +    G   +  L+  G   GL    LK K+G   + T +L F        +L
Sbjct: 169 FTVAVRTDLKDKGPGGISMLMVPGDAPGLSRSPLK-KMGWLCSDTAQLRFDGVRVPAHYL 227

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       +        L  A M++        EA+ +AR+R   G  L+D  V++  
Sbjct: 228 VGEEGAGFKMILTNFNGERLSMAAMALGFSECCYDEALAWARQRKTFGMALVDHQVIRHK 287

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           + D+ + I +  A    ++   D     ++ A +   +  + K    +       + ++ 
Sbjct: 288 LMDMKMRIESTRAWLNAVSARADSGDKAAKGAEWVAQVC-LLKNHATQTMQFCADQGVQI 346

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG G++   +  R YRE     I  G+   M       L
Sbjct: 347 LGGMGFMRGVACERIYREVKVMMIGGGTEEIMKELASRQL 386


>gi|302551599|ref|ZP_07303941.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469217|gb|EFL32310.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 385

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 134/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F     + +HK  A      A+       S      +   
Sbjct: 40  RDFYYKLGELGIFGINVPEEFGGAGLE-SHKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  S E                 + +TE   G+D+A + S  +  
Sbjct: 99  IKMLATDEQKKRYLPKFVSGEEM-------------WAIAMTEPGTGSDLAGMKSTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPTAEDRRHGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAKQYVQERTVFGKPVSHFQNTKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|66048238|ref|YP_238079.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|289677381|ref|ZP_06498271.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5]
 gi|63258945|gb|AAY40041.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|330937471|gb|EGH41436.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330976260|gb|EGH76322.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 393

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  EFGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPDHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 LARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|254480326|ref|ZP_05093574.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039888|gb|EEB80547.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 391

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 90/380 (23%), Positives = 146/380 (38%), Gaps = 33/380 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSI--HDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P L  +   G   D++    A   LL+       G      D+ ++ +V ++  +I +A 
Sbjct: 36  PNLDDWDENGNIPDEMWAKAAGIGLLQLGYPEQYGGVSEGIDQHYKNIVSEELARIGSAG 95

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                 L  G  + P V  A       +  + ++  P + S E               I 
Sbjct: 96  GISSTLLVHGIGLPPVVHFA-------SDDIKEEVVPAVLSGE-------------KRIS 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE  GG+D+A I +  +   D  Y ++G K F+S  M   ++  A   G+ G   V 
Sbjct: 136 LGITEPSGGSDVAGIQTTAKAEGD-FYIVNGSKTFISGGMGANWVSTAVRTGKAGPKGVS 194

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILI 316
            LL      G+    L  K G   + T  L F N      +L+G+       +       
Sbjct: 195 MLLIPMDLAGVSRTPLDKKQGWWCSDTATLYFDNVKVPKKYLMGEEGHGFLVIMHNFNSE 254

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L   +   +  R  L EA+ +A+ R   G  L D  V++  +A +   I A  A +  L
Sbjct: 255 RLAMIVTMEAAARCCLEEAVTWAQERKTFGKRLADHQVIRHKVAMMKQKINATQAYALHL 314

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +F E +    + A  ++ A  T  +C         EA + +GGS Y+    + R YRE
Sbjct: 315 TEAFIEGRCHPGDLAMLKVQASETMEFC-------AREASQILGGSSYLRGSKVERIYRE 367

Query: 437 SPANSILLGSGNAMVLDVLN 456
              N+I  GS   M      
Sbjct: 368 VRVNAIGGGSEEIMRDLAAR 387


>gi|108801269|ref|YP_641466.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870420|ref|YP_940372.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771688|gb|ABG10410.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696509|gb|ABL93582.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 382

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 17/308 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                    V ++   + + TP +      ++      PT         +   L +TE  
Sbjct: 76  MHYAGAPGGVFASLFTSGIATPHMTASGDERLIDTYVRPTLH-----GELIGSLAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+  +T++ ++  D  Y ++G K +++S +   +++ A   G  G   V  L+ D  
Sbjct: 131 GGSDVGHLTTRAERDGD-SYVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVSLLVVDKG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  
Sbjct: 190 TPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSERVGLAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + S  +  L   + + R R   G  LI +  ++  +A++A  +  A   +  +       
Sbjct: 250 AYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHVVERQLSG 309

Query: 384 KSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I
Sbjct: 310 ETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGI 362

Query: 443 LLGSGNAM 450
             G+   +
Sbjct: 363 GGGTTEIL 370


>gi|104783924|ref|YP_610422.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
 gi|95112911|emb|CAK17639.1| probable acyl-CoA dehydrogenase [Pseudomonas entomophila L48]
          Length = 598

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/503 (18%), Positives = 176/503 (34%), Gaps = 68/503 (13%)

Query: 83  QLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
               +   G+  +      + E  P     +   +  G   +  D     +         
Sbjct: 52  YFAPHNRKGDEHEPRYVDGRAELIPEVKPAVDAFLDAGFLNANRDFEVGGMQLPSLVSQA 111

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
               +  A          ++ +A+++    +    + +   +    Y  T          
Sbjct: 112 CFAHFQAANAGTTAYPFLTMGAANLIESFGSDEQKRLFLQPMIEGRYFGT---------- 161

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251
              + LTE   G+ +A I ++ +   DG Y L G+K F+S    +       ++LA++  
Sbjct: 162 ---MALTEPHAGSSLADIRTRAEPAGDGTYRLKGNKIFISGGDHELSENIVHMVLAKLPD 218

Query: 252 ------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
                  +  F+VP+ L +     G  N +    L +K+G R   +  L F +     G+
Sbjct: 219 APPGVKGISLFIVPKYLVNVDGSLGQRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGY 278

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347
           L+G  +     +  M     +   + +V         ++ YAR+R   G           
Sbjct: 279 LVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLDYARQRPQ-GRLPDNKDPHSP 337

Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPI 399
              +I+   +KR +      +  A  L    A  FD+  + ++E A         ++ PI
Sbjct: 338 AVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENARRQALELLDLLTPI 397

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457
            K W           A++ +GG GY  E  + ++YR++  N I  G+     LD+L   L
Sbjct: 398 VKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLGRKL 457

Query: 458 LEKGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKI------- 508
            +      ++L   +    +  S    +  +L+    L    + +   L   +       
Sbjct: 458 AQNNGAGLKRLIRLIAGTCERASHHPNLDALLQPLEQLVNRLQTVTLTLLGDLASGKVAG 517

Query: 509 ALASSAAALYRAGMNDIADVFLE 531
           ALA+SA  L   G   I   +LE
Sbjct: 518 ALANSALYLKVFGHCVIGWRWLE 540


>gi|313498319|gb|ADR59685.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida BIRD-1]
          Length = 386

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 66/346 (19%), Positives = 114/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S +++    +      WA  +F             
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALIERELS---KVSWALHVFVARPSKILMACKD 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  AI ++  +  D         +   +  +D
Sbjct: 104 EQINDYLLPCVQGEKIDCFALTEPGAGSDANAIKTRAVRQGDDFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V  LL D    G+  +R    + NR   T EL F +    
Sbjct: 164 FAIVFAVTDTYEHNGRKRNAVTALLVDRGTPGMTIRRGPKCVSNRGYHTYELFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLQWAADRKQFGQPIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A   D+      EA  A       K +  ++   V  +
Sbjct: 284 VSFKLADMATQIRAAEMLTLHTAWKMDQGNMTDGEAGMA-------KLFASEVLGKVADQ 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       +   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIIARELLR 382


>gi|330807159|ref|YP_004351621.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375267|gb|AEA66617.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 600

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/455 (17%), Positives = 156/455 (34%), Gaps = 57/455 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A   +      ++ +A+
Sbjct: 76  PEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +   +    +  T             + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGSEEQKQRFLQPMIDGRFFGT-------------MALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            SDG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 ASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GPRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R                 +I    ++R +      +  + 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKAYVEGSF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+         R        ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDTTTLESEAERRRAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG-SSGK 481
             E  + ++YR++  N I  G+     LD+L   L + G    +QL   +      +   
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLVANTTERAQAH 482

Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
             +T LR  +        +AR  T  + L +  A 
Sbjct: 483 ASLTPLRQPLEAL-----VARLQTVTLGLLTDLAQ 512


>gi|328545417|ref|YP_004305526.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326415159|gb|ADZ72222.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 392

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 121/360 (33%), Gaps = 26/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++      GL        +  +    +   +    L   A        +     +  VA
Sbjct: 39  DIVAAMREMGLFGLSIAEDYGGLGLSMEEEALVVFELGRAAPAFRSMFATNVGIGSQGVA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T      + P++ S E             +     LTE   G+D  ++ +  ++  D
Sbjct: 99  IDGTSEQKARYLPRLASGE-------------LIGSFALTEPEVGSDAGSVRTTARRDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  F ++A+    + G   V     +    GL   + + K+G +
Sbjct: 146 SYVLNGTKRFITNAPHAGLFTVMARTNPDIKGAGGVSAFAVEAGVPGLGLGKPERKMGQQ 205

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
                ++ F N        +      G    MK+L    L  A          + + + Y
Sbjct: 206 GAHVCDVIFDNCRIPADALIGGVEGQGFKTAMKVLDKGRLHIAAACTGLAERIIDDMLAY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  + +  +++   AD   D  AA AL    A   D  +  S  AA A++   
Sbjct: 266 AVGRTQFGRPIAEFQLLQAMFADSKADALAARALVLDAARRRDAGEDVSMAAACAKM--- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  +M   V    ++  GG+GYI +    + +R++    I  G+       +   L
Sbjct: 323 ----FASEMVGRVADRNVQVHGGAGYIRDYRAEQLFRDARLFRIYEGTTQIQQTIIAKAL 378


>gi|319763465|ref|YP_004127402.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824288|ref|YP_004387591.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118026|gb|ADV00515.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309660|gb|AEB84075.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 385

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 140/394 (35%), Gaps = 33/394 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A  +AR A           P     D+       H  + +    G+            
Sbjct: 15  AVADAVARFAT------GTLAPRAREIDEHGLSVTCH--VPQLAELGVMGMNLPEHLGGA 66

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  + +      A      ++         V +  +P  H  W P+  S E+    
Sbjct: 67  GVTPTAMLLSLVEISRACAATSSMIGAHYLGTDAVLIGGSPGQHARWLPRAASGEW---- 122

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAF-IM 245
                      G  LTE RGG+  A + ++  +  +G  Y + G K F+S+     F ++
Sbjct: 123 ---------LAGFALTEPRGGSHPADLRTRATREGEGAHYRIDGVKHFISNAKEARFLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
            A+ +   G   V   + +    G+     +  +G +     E+ F +        L   
Sbjct: 174 FAKTDPDAGARGVSAFVVETDSPGISISSPERLMGIQGAHAFEVAFDSVRVPAANRLGAE 233

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            TG    MK+L    LD A  ++     +LA+A  + + R + G  +  +  ++  +AD+
Sbjct: 234 GTGFKTAMKVLDNSRLDVAATALGIAEAALADATRWMKERQIGGEPIAGKQGLQWMLADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            L + A+  L+ +        +  + ++A A++ A        +MA  V   A++  GG 
Sbjct: 294 KLRLEASWGLTLQALALRQAGQPFTLQSAMAKLHA-------SEMAGFVADAALQIHGGY 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY  E  + R+ R++    I  GS       +  
Sbjct: 347 GYTREMPLERYVRDARILRIYEGSSEVQRNIIAR 380


>gi|15595644|ref|NP_249138.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107099431|ref|ZP_01363349.1| hypothetical protein PaerPA_01000443 [Pseudomonas aeruginosa PACS2]
 gi|116054176|ref|YP_788620.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889187|ref|YP_002438051.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254237322|ref|ZP_04930645.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
 gi|254243543|ref|ZP_04936865.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
 gi|296386944|ref|ZP_06876443.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313111928|ref|ZP_07797717.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946306|gb|AAG03836.1|AE004482_3 glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115589397|gb|ABJ15412.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169253|gb|EAZ54764.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719]
 gi|126196921|gb|EAZ60984.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192]
 gi|218769410|emb|CAW25170.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310884219|gb|EFQ42813.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 393

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 142/409 (34%), Gaps = 45/409 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +AQ+ A+        L A+          +  P    + R     GL  +    
Sbjct: 23  ERMVRDSAQQFAQD-KLAPRVLEAFR-------HEQTDP---KIFREMGETGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 72  AYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDEGQ----IRGFVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENA 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
                G          L+SA   +S   +  AE   +  R     R   G  L    +++
Sbjct: 235 FPEVRGLR---GPFTCLNSARYGISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQ 291

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +   A 
Sbjct: 292 KKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLAR 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 345 DMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|315425120|dbj|BAJ46792.1| acyl-CoA dehydrogenase domain protein [Candidatus Caldiarchaeum
           subterraneum]
 gi|315426885|dbj|BAJ48505.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
          Length = 401

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 133/380 (35%), Gaps = 36/380 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  ++    P   ALL+++   G        +++       +                  
Sbjct: 39  KEIERTNTIP--KALLKKAAEQGYLGLGIPETYDGQGTDMMYSTLFVEEVSRICPAFTVA 96

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               V     V +  T    + + P             P+ +         TE   GTD+
Sbjct: 97  TLVGVLFTYPVMVYGTEEQKRKYLP-------------PIARGEKFAAHATTEPGAGTDV 143

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG----CFLVPRLLEDGS 266
           A I +  ++  +G + ++G K+F+S    +D FI+LA+             +   + +  
Sbjct: 144 AGIETTAKRK-NGGWEINGRKYFISGADKADYFIVLARTSPPPSRKERHKGLSFFIVERG 202

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSV 325
             G         IG R +   E+   N +     + N+     +  KI +   D   + V
Sbjct: 203 TPGFRVGEKIEVIGIRGSHPCEVILDNVYVP---EENMVGEEGQGFKIAMDTYDHGRIGV 259

Query: 326 SGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V      L + + Y+ +R V    LI    ++  ++++   +  A  + +      
Sbjct: 260 AAQAVGVAQACLEKTLQYSLQRRVFERPLIYFQAVQFHVSEMLTMLEGARLMLYWATTLA 319

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ +    EA  A   A + K +  ++A     +A+   GG G   +  + R  R+S   
Sbjct: 320 NKNRP---EAVMA---ASMAKLYATEVAEKAALKAITVHGGVGVATDGLVERFLRDSQVF 373

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+ +   L +L  + K
Sbjct: 374 KIYEGANDIQKLVILRQMMK 393


>gi|78065380|ref|YP_368149.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383]
 gi|77966125|gb|ABB07505.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
          Length = 395

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/409 (19%), Positives = 144/409 (35%), Gaps = 42/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++   AQ  A+  +   P++       ER D   F        R     GL       
Sbjct: 22  ERMVRDAAQAYAQ--DKLAPRVTEAFRH-ERTDAEIF--------REMGEVGLLGPTIPE 70

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    +    + + PK+ + 
Sbjct: 71  EYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIYEFGSDAQKQKYLPKLATG 130

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 131 EW-------------IGCFGLTEPNHGSDPGSMVTRAKKVPGGYSLSGAKMWITNSPIAD 177

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A++E   G   +   + +    GL    +  K+G R++ T E+     F     +
Sbjct: 178 VFVVWAKLE-ENGKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVP---E 233

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
            N+             L+SA   ++   +  AE+  +  R     R   G  L    +++
Sbjct: 234 ENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQ 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I        RL    DE  +       A  +  I K   C  +  +   A 
Sbjct: 294 KKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIARLAR 346

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 347 DMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|301631619|ref|XP_002944895.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 380

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 126/373 (33%), Gaps = 33/373 (8%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V FH  W         + R++  +GL  ++    +        H                
Sbjct: 30  VPFHAQWERDGIVPKEVWRKAGREGLLNTMLPEPYGG-GGDFGHAAVLIEEVARTGASGL 88

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    +      W P              M   ++   + +TE   G+
Sbjct: 89  GFPLHSDIVAPYIHAYGSTAQKDRWLPH-------------MAAGALIGAIAMTEPGAGS 135

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGSPN 268
           D+ ++ +  ++  D  Y ++G K F+++ ++   + ++ +    +G   V  ++ +    
Sbjct: 136 DLKSVRTTARREGDH-YVINGAKTFITNGINAGLVIVVCKTAPELGAKGVSLIVVEEGTP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R   KIG  +  T EL F +     G LLG+ N     +        L  A+ + 
Sbjct: 195 GFSKGRKLEKIGLMAQDTSELFFDHAKVPAGHLLGEENQGFKYLMKELAQERLVVAVRAA 254

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           + +   L + + Y R R   G  + +    +  +A+                   D+  +
Sbjct: 255 ASIEAMLHQTVAYTRERRAFGQTVFEFQNTRFKLAEAKAQATMLRVFV-------DDCIA 307

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A     A + K     +   ++ E ++  GG GY+ E  + R + ++    I  G
Sbjct: 308 LHLRRALTPERAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRIYGG 367

Query: 446 SGNAMVLDVLNLL 458
           S   M   +   L
Sbjct: 368 SDEIMKEIIARTL 380


>gi|154340681|ref|XP_001566297.1| acyl-coa dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063616|emb|CAM39801.1| putative acyl-CoA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 629

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 146/419 (34%), Gaps = 55/419 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            V     + A  +     G         +       +       +   A          S
Sbjct: 100 HVTTPKGFKAAYQALAAGGWTSVNEPEKYGGQGLPFSVGFTTREIMATANWGFSMYSGLS 159

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           + +   +    +  +   + PK+ S E+  T             + LTE + GTD++ + 
Sbjct: 160 LGACRTLMSWASEELKDQYLPKLVSGEWSGT-------------MCLTEPQCGTDLSQVK 206

Query: 216 SQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE 263
           ++ +   DG  Y ++G K F+S+   D       I+LA++         +  FLVPR + 
Sbjct: 207 TKAEPSGDGKSYNITGTKIFISAGDHDLTENIIHIVLARLPNSLPSTKGLSLFLVPRHVV 266

Query: 264 DGSPNG-------LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316
             +PNG       +    L+ K+G + ++T +L F  + G+L+G+ +     +       
Sbjct: 267 --NPNGSLEAAKNVECSGLEKKMGIKGSSTCQLSFDKSVGYLIGEPSAGMKQMFTFMNAA 324

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIAL 364
            +  A+  V    ++    + YAR R                  +I    +++ +     
Sbjct: 325 RMGCALEGVCHAELAFQNGLQYARERRSMRALSGAKEPEKPADRIICHANVRQNLLFAKA 384

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMEC 418
                 AL   +    D   + ++    A          PI K    +      +  ++ 
Sbjct: 385 VAEGGRALLTDVGRLLDMHAAATDAVKAAALDHEIGFYTPIAKACVTEWGVEAASRLLQV 444

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQ 474
            GG GYI+   + +  R+S   +I  G+     LD +    L  KG N  ++    + +
Sbjct: 445 WGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTKGGNQAKRFGKRVSK 503


>gi|119387117|ref|YP_918172.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377712|gb|ABL72476.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 403

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 136/390 (34%), Gaps = 41/390 (10%)

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYL 142
                R +      E  P     +  S   GL     D ++  V     A+ + A  +  
Sbjct: 44  DRLAPRVEAAYLNEETDPEIFREMGAS---GLLGVTVDEAYGGVGASYVAYGLVAREIER 100

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +           S      +    +    + + PK+ S E+                 GL
Sbjct: 101 IDSGYRSMASVQSSLVMFPIEAYGSEAQKQKYLPKLASGEF-------------IGCFGL 147

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D A + +  +K   G        W  ++P++D F++ A+ E   G   V   +
Sbjct: 148 TEPDAGSDPAGMRTVARKTGGGYVLNGSKMWISNAPIADVFVVWAKSEAHGGK--VRGFV 205

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSA 321
            D    GL   ++K K+  R++ T E+   N         +     +E M      L+ A
Sbjct: 206 LDKGTPGLSAPKIKGKLSLRASITGEIVMENVEV----GEDALLPNIEGMGGPFGCLNRA 261

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              +S   +  AE     A  Y   RH     L    + ++ +AD+  +IA     S R+
Sbjct: 262 RYGISWGAMGAAEDCWFRARQYGLDRHQFNRPLAATQLYQKKLADMQTEIALGLQASLRV 321

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FDE K       +A  M  I K   C  A  +  +A +  GG+G      + RH + 
Sbjct: 322 GRLFDEGK-------FAPEMISIVKRNNCGKALEIARQARDMHGGNGIQIGYHVMRHAQN 374

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
               +   G+ +   L +L   + G   F 
Sbjct: 375 LETVNTYEGTHDVHAL-ILGRAQTGIQAFA 403


>gi|257485734|ref|ZP_05639775.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289627365|ref|ZP_06460319.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648079|ref|ZP_06479422.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|320321712|gb|EFW77810.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331464|gb|EFW87404.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330880908|gb|EGH15057.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330890641|gb|EGH23302.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330986890|gb|EGH84993.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331012017|gb|EGH92073.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 393

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           +F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  AFGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|116004093|ref|NP_001070404.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Bos
           taurus]
 gi|115305304|gb|AAI23881.1| Acyl-Coenzyme A dehydrogenase, long chain [Bos taurus]
 gi|296490369|gb|DAA32482.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Bos
           taurus]
          Length = 430

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 123/375 (32%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + +H  W         L  ++   GL           +                +     
Sbjct: 73  IPYHAEWEKAGEVSRELWEKAGKQGLLGISIADHHGGIGGDLYSSAIVWEEQAYSNCTGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFGLHSDIVMPYITNYGSEEQIKRFIPEMVAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+++    D  I++A    E       +   L +  
Sbjct: 180 DLQGIRTNAKKDGSD-WILNGSKVFVTNGWLCDIVIIVAITNREAHSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +KIG ++  T E  F +     G LLG+ N     +        L  + +
Sbjct: 239 MKGFIKGRKLDKIGLKAQDTAEFFFEDVRLPAGALLGEENKGYYYLMQELPQERLLISEI 298

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +VS       E   Y ++R   G  + D   +K  +A++   I    A            
Sbjct: 299 AVSASEFMFEETRDYVKQRKAFGKTVADLQTVKHKLAELKTSICVTRAFVDSCLQLHRVK 358

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +     AA A       KYW   +   V  + ++  GG GY+ E  IA+ Y ++   +I 
Sbjct: 359 RLDVATAAMA-------KYWASDLQNRVAYDCLQLHGGWGYMFECPIAKAYVDARVQTIY 411

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 412 GGTNEIMKELIAREI 426


>gi|302560533|ref|ZP_07312875.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces
           griseoflavus Tu4000]
 gi|302478151|gb|EFL41244.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces
           griseoflavus Tu4000]
          Length = 385

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      A+       S      +   
Sbjct: 40  RDFYYKLGELGIFGISVPEEFGGAGMDT-HKFEAVLYEETARAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + PK  S E                 + +TE   G+D+A + +  +  
Sbjct: 99  LKMLATDEQKKRFLPKFVSGEEM-------------WAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+            +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDRRHGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y + R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAKQYVQERTVFGKPVAHFQNTKFELAACQAEVDAAEAVADRATEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKDM 383


>gi|86360546|ref|YP_472434.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284648|gb|ABC93707.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 395

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 130/360 (36%), Gaps = 33/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A+ R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  AIFREMGELGLLGPTISPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPIE 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSAAQKQKYLPKLATGEW-------------IGCFGLTEPDHGSDPGSMATRAKKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+     F     + N+  G          L+SA   ++   +  AE     A  Y
Sbjct: 218 SITGEVVMDGVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+A +IA       RL    +E     E       +  
Sbjct: 275 VLERKQFGRPLAANQLIQKKLADMAAEIALGLQGCLRLGRMKEEGHPPVE-------LTS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 328 ILKRNSCGKALEMARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRSI 387


>gi|49088442|gb|AAT51570.1| PA0447 [synthetic construct]
          Length = 394

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 142/409 (34%), Gaps = 45/409 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +AQ+ A+        L A+          +  P    + R     GL  +    
Sbjct: 23  ERMVRDSAQQFAQD-KLAPRVLEAFR-------HEQTDP---KIFREMGETGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 72  AYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIHEFGNEATRQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDEGQ----IRGFVLEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENA 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
                G          L+SA   +S   +  AE   +  R     R   G  L    +++
Sbjct: 235 FPEVRGLR---GPFTCLNSARYGISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQLIQ 291

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +   A 
Sbjct: 292 KKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIARLAR 344

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 345 DMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|85375232|ref|YP_459294.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788315|gb|ABC64497.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 396

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 128/366 (34%), Gaps = 32/366 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
            ++      GL        +       +   R       A      + S +V   +  + 
Sbjct: 46  EIVEEMKEMGLFGLTVPEEYGGAGLNTSQYARVVNTMAYAAPAYRSIFSINVGMFNSAIK 105

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +W P+I + E                  GLTE   G+D AA+ +  +   D
Sbjct: 106 NGATDAQKAEWWPRIAAGE--------------IACFGLTEPGSGSDSAAMATTARPDPD 151

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G         ++  ++P +D  +++A+ E         V   +      G+       K+
Sbjct: 152 GNGWILNGTKRYITNAPHADVGLIMARTEKEALPKNAHVSAFIVPMDTPGVTTASPDKKM 211

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAE 334
           G   +   ++   +        L   TG       ++ LD+  +SV           L  
Sbjct: 212 GQEGSHISDVILEDVKVPGDALLGGETGRGFRF-AMMSLDNGRISVGAAAAGYARRALDS 270

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YA  R   G  + +  ++++ +A+   +I AA A+   +    D  ++   +AA   
Sbjct: 271 AVRYATERKAFGEPIANFQLIQQMLAESETEIYAAEAMMKDVCERADRGENILRKAA--- 327

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  +M   V+   ++  GG+GY+ E    R +R++    I  G+   + L +
Sbjct: 328 ----AFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAERFFRDARIYRIYEGTTQILYLQI 383

Query: 455 LNLLEK 460
              + +
Sbjct: 384 AKHMLR 389


>gi|134278577|ref|ZP_01765291.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|134250361|gb|EBA50441.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
          Length = 383

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 139/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H +  +    G+       ++       ++++      +MA+  
Sbjct: 23  NPHVDEWEEAGIFPA-HEVFGKLGALGMLGLSKPAAYGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +          AP         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLAPAIAGRQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  D         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTSARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R R + G  ++D  V+   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRTRKIFGRPVLDHQVVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SI+R YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|13472548|ref|NP_104115.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14023294|dbj|BAB49901.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 398

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 126/364 (34%), Gaps = 30/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +  +          AR           +MS  S      +    
Sbjct: 58  REMGEAGLLGITIPEEYGGLGANYVTYGLVAREVERVDSGYRSMMSVQSSLVMYPIHAYG 117

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K + PK+ S E+                 GLTE   G+D   + ++ +K ++G  
Sbjct: 118 SDEQRKKYLPKLASGEW-------------IGCFGLTEPDAGSDPGGMKTRAEKTANGYK 164

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++ A+++G  G   +   + +    GL   ++  K+  R++ T
Sbjct: 165 LSGSKMWISNAPIADVFVVWAKLKGETGKDEIRGFVLEKGMKGLSAPKIGGKLSLRASIT 224

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+            L  + G          L+ A   +S   +  AE   +  R     
Sbjct: 225 GEVVMEGVEVGEDALLPNAKGLGGPFG---CLNRARYGISWGSMGAAEDCWHRARQYGLD 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + ++ +AD+  +IA     S R+    D  K        A  M  I K
Sbjct: 282 RKQFGKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLLDAGK-------MAPEMISIVK 334

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +  +A +  GG+G      + RH +     +   G+ +   L +L   + G
Sbjct: 335 RNNCGKALDIARQARDMHGGNGIQIGYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTG 393

Query: 462 TNLF 465
              F
Sbjct: 394 IQAF 397


>gi|119188865|ref|XP_001245039.1| hypothetical protein CIMG_04480 [Coccidioides immitis RS]
          Length = 628

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 122/595 (20%), Positives = 221/595 (37%), Gaps = 77/595 (12%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q P  I  +    D +   +++       P  ++++L      VLS   Q
Sbjct: 16  EPSSSTAGFFQGPPVIPPSI-EDDGIFRRVVSLHLPSPIPQHLYQDLTQFSNLVLSKPIQ 74

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P +      G   + D +     W  L    I +G+  S ++++      
Sbjct: 75  SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKASGGD-L 133

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 ++ + +L     A      ++T  +   L      H D        E      +
Sbjct: 134 WNNRVYQSLKFFLWVPSAAMVTCPSAMTDGAACLLGR----HLDGENGEIFAEARRRLTS 189

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKW 233
                +   G  +TE++GG+D+    +  +K+S                 G + + G KW
Sbjct: 190 RDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMPLGPWRIDGFKW 249

Query: 234 FLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNA 285
           F S+  ++  I+LA+   +G V  F  P          +   NG+  QRLKNK+G +   
Sbjct: 250 FSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQRLKNKLGTKPVP 309

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T ELE      +L+G        +  +  +  L +AI +VS     LA +  YA+ R V 
Sbjct: 310 TAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAISKAYAKVRAVR 369

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEA--------- 390
             +L+D P   R +A   +  AA T L+F +A         +  ++ + +A         
Sbjct: 370 NTMLMDMPAHVRKLAQDHVKYAANTHLTFLVAALLGVSEGQESGRTPAAQANIVPQTPQQ 429

Query: 391 --AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIARHYRESPANSILL 444
             A  R++ P+ K      A   +   ME +GG GY+E      +IAR +R++   SI  
Sbjct: 430 AHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDACVLSIWE 489

Query: 445 GSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLG--------SSGKKVITILRDSI--- 491
           G+ + M  DV+ +++  +G      L + +   L         + G+++  +    +   
Sbjct: 490 GTTDIMADDVVRVVKGREGPQCLAVLGAWVSNALNVSNSKGFHNEGRQLQRVWEQWLTGV 549

Query: 492 --SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF--LENR--FLDNCHS 540
                ++ K   R     +        L      D  D+   +  R    D+   
Sbjct: 550 NNKDKEQLKWEGRNYLRDLEHVVCGCLLILDASRDQDDIAREIARRWILGDDASQ 604


>gi|186477187|ref|YP_001858657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184193646|gb|ACC71611.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 396

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 130/369 (35%), Gaps = 35/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ S E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 114 EFGSDAQKDKYLPKLASGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G        W  +SP++D F++ AQ   +G+         + +    GL    +  K+G 
Sbjct: 161 GYSLSGAKMWITNSPIADVFVVWAQLETDGKDEIRG---FILEKGWKGLSAPAIHGKVGL 217

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           R++ T E+     F     + N+  G          L+SA   ++   +  AE+  +  R
Sbjct: 218 RASITGEIVLDEVFVP---EENLMPGVKGLRGPFTCLNSARYGIAWGALGAAESCWHTAR 274

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R   G  L    ++++ +AD+  +I        RL    DE  +       A  +
Sbjct: 275 QYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEI 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L 
Sbjct: 328 TSIMKRNSCGKALDIARMARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILG 386

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 387 RAQTGIQAF 395


>gi|28872567|ref|NP_795186.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28855822|gb|AAO58881.1| acyl-CoA dehydrogenase, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 393

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 130/370 (35%), Gaps = 40/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     F             AR           +MS  S      + 
Sbjct: 54  DIFREMGEVGLLGATIPEEFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPIN 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E+                 GLTE   G+D  A+ ++ + +  
Sbjct: 114 EFGTQAQKEKYLPKLASGEW-------------IGCFGLTEPNHGSDPGAMITRARSVEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 161 GYRLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWAGLSAPVIHGKVGLRA 216

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+   N F        D+    GP         L+SA   +S   +  AE   +  
Sbjct: 217 SITGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTA 270

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R   G  L    ++++ +AD+  +I  A     RL    DE  +       A  
Sbjct: 271 RQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGIA-------AVE 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I K   C  +  +   A + +GG+G  +E  IARH       +   G+ +   L +L
Sbjct: 324 ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-IL 382

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 383 GRAQTGIQAF 392


>gi|229587692|ref|YP_002869811.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|312958214|ref|ZP_07772737.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
 gi|229359558|emb|CAY46399.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25]
 gi|311287645|gb|EFQ66203.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6]
          Length = 393

 Score =  230 bits (588), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 146/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A++ A+        L A+          +  PA    +      GL  ++   
Sbjct: 23  ERMVRDSAEQFAQD-KLAPRVLEAFR-------HEKTDPAIFREMG---ETGLLGAMIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  QYGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ +K+  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARKVEGGYSLTGAKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++  + +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWGKDDAGD----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     RH  G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRHQFGRPLAATQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGLQAF 392


>gi|118471201|ref|YP_886559.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172488|gb|ABK73384.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 397

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 126/365 (34%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            +  ++ + GL      + +  +    A  +  A  +    L       + +  +  ++ 
Sbjct: 50  DIREQAKNMGLFGYAIPQQWGGLGLNLAQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W   I S E             V     LTE   G++ A + ++  +   
Sbjct: 110 GFGTDEQKQQWLEGIASGE-------------VVASFALTEPGAGSNPAGLRTKAVRDGS 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P +  F++ A+          +   L      G+       K+G  
Sbjct: 157 DWVINGQKRFITNAPTAGLFVVFARTRPADADGAGIAVFLVPADTPGVEVGPKDAKMGQE 216

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F++        + G  +V             +  A ++V   + +L E++ Y
Sbjct: 217 GAWTADVNFTDVRVPAAALVGGSEDVGYRAAMTSLARGRVHIAALAVGTAQRALDESVAY 276

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  IAD    + A  AL    A  +   + R       RI   
Sbjct: 277 AATATQGGQPIGNFQLVQAMIADQQTGVMAGRALVRDAAQKWVTGEDR-------RIAPS 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GG+GY+ E  + R YRE     +  G+     L +   L
Sbjct: 330 AAKLYCTEMAGTVADLAVQIHGGTGYMREVPVERIYREVRLLRLYEGTSEIQRLIIGGGL 389

Query: 459 EKGTN 463
            K   
Sbjct: 390 VKAAQ 394


>gi|268590788|ref|ZP_06125009.1| acyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
 gi|291313567|gb|EFE54020.1| acyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
          Length = 379

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 133/373 (35%), Gaps = 26/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +R+D+ E   A    L+     G         +           +       A    
Sbjct: 26  PNAQRYDETETFCA--ESLQALGEMGCWGINLPEQYGGFGIGSVAMSKVVEAVAAACAST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++    +   + +  T      W PK  + E             +    GLTE   G
Sbjct: 84  SSALTAHFLATDSILIGGTEEQKNHWLPKAAAGE-------------LLGAFGLTEPAAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ A + +   + + G        +  ++  +D  ++ A+ +   G   +   +      
Sbjct: 131 SNPADMRTVAVRENGGWRIRGNKHYITNAKEADFIVLYAKTDVEAGARGISAFMIPKGTE 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ + + +  +G R +   EL   N +     LLG+ N       ++     ++ A  S+
Sbjct: 191 GVAFSQPEKTMGLRGSTIYELAL-NCWLPESALLGEENKGFHTAMEVLDKGRVEVAATSL 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R ++  A+ + + R +    L      +  IAD+   + AA  L+++ A   D  + 
Sbjct: 250 GIARAAMESALGWVKERQIGKKPLAAYQGTQWRIADMHTQLEAARMLTWQAAELRDSGER 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S ++A A       K +  + A  V   A++  GG GYI +  + R+ R++    I  G
Sbjct: 310 FSLQSATA-------KLFAAECAGFVTDAALQLHGGYGYIRDLPLERYVRDARILRIFEG 362

Query: 446 SGNAMVLDVLNLL 458
           +     + +   +
Sbjct: 363 TSEIQKIIISRAV 375


>gi|161525739|ref|YP_001580751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189349539|ref|YP_001945167.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|221214378|ref|ZP_03587349.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|160343168|gb|ABX16254.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189333561|dbj|BAG42631.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|221165635|gb|EED98110.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 395

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 150/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   A   A+  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTED-ERMVRDAAHAYAQ--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIYEFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A+++   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYSLSGAKMWITNSPIADVFVVWAKLD-EDGKDTIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     + N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---EENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|254284206|ref|ZP_04959174.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
 gi|219680409|gb|EED36758.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium
           NOR51-B]
          Length = 602

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 104/500 (20%), Positives = 182/500 (36%), Gaps = 68/500 (13%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           + N P+       GER   V   P   A        GL  +  D S   +         A
Sbjct: 61  DRNPPEF-----DGER---VRLIPDIKAAYEAVAEAGLIAADQDYSMGGMQLPPVVSASA 112

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                 A        + +  +AS++           W P++ S E+  T           
Sbjct: 113 TAYLTAAGSTTNGYHALTAANASLLEAHGDEEQIATWVPRLRSGEFAGT----------- 161

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
             + L+E   G+ ++ IT++    SDG Y L G K ++S    +        +LA++EG 
Sbjct: 162 --MALSEPHAGSSLSDITTKAVLQSDGSYRLYGSKIWISGGDQELSSNIVHAVLARIEGA 219

Query: 252 -----RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFL 298
                 +  F+ P+ L D S      N +    L +K+G R + +  L F        FL
Sbjct: 220 PPGVPGISLFICPKFLLDESGQVSRRNDVHLTGLFHKMGGRGHTSTALNFGEREGAVAFL 279

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------- 348
           +G  N   G +  M     +   +M+ +        A+ YAR R                
Sbjct: 280 VGQPNAGLGYMFHMMNEARVMVGMMAATLALTGFQYALWYARERTQGRLPSNKNPLSAPV 339

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITK 401
            LID   ++R +         A +L    +   D+A++  +             + PI K
Sbjct: 340 ALIDHADVRRMLLAQKAYAEGAFSLCLFASQLVDDARTHPDSEQREWAHDLLDFLTPIVK 399

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
            +  +  P     A++ +GG+GY +E  +   YR++  N I  G+     LD+L   L E
Sbjct: 400 TFPSEFGPRANDLAIQVLGGAGYTDEHPVEMMYRDNRLNPIHEGTTGIQALDLLGRKLTE 459

Query: 460 KGTNLFEQLFSTLEQDLGSSGK-----KVITILRDSISLCKED-KGLARFLTE---KIAL 510
           K    +      +E++   + K     ++   L  ++   K   + L   L E    +AL
Sbjct: 460 KKMRGYITCVGAMEREQIKASKWESLLEMDMALGSALGHLKRATEALVSALNEENTDLAL 519

Query: 511 ASSAAALYRAGMNDIADVFL 530
           A++   L   G   +  ++L
Sbjct: 520 ANAPVYLQLFGHVVVGWMWL 539


>gi|73537335|ref|YP_297702.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72120672|gb|AAZ62858.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 385

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 134/402 (33%), Gaps = 33/402 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +     +     A          GP GERW +         + R++   G      D 
Sbjct: 3   RLIFDAEHESFRESARRF--YQREVGPHGERWREQGCVD--RDVFRKAGEQGYLLMWADE 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +                Y    +E       +    ++ + +  P     +  +I + E
Sbjct: 59  KYGGAGVDDFR-------YEQILIEENARHGDTGFFGTLHSRLVAP-----YVGRIGNEE 106

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                     +      + +TE + G+D+A I ++ +   D         +  +  ++D 
Sbjct: 107 QRQRLLPAAARGEKIFAIAMTEPQTGSDLAGIRTRAEDKGDHWLLNGAKTYISNGQLADY 166

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            +++A+ +       +   + +    G    R   K+G  S  T EL F N         
Sbjct: 167 VVVVARTDPERSH-GLGLFIVERDMPGFQRGRKLRKMGLHSQDTSELFFDNVRVPKS--- 222

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           NV   P +  + L        L  A   ++  +V+    + Y + R   G  +      +
Sbjct: 223 NVLGEPGQGFRYLTRHLAEERLIGACGYMASAQVAFDITLDYVKERKAFGRAIGTFQDSR 282

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   + A      +     +      E AA A+++         ++   V+ E +
Sbjct: 283 FRLAELRAQLDALQTFVDQCVLQHNAGTLTVETAASAKLLT-------SELQGRVVDEGV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG+GY+EE  I R Y ++  + I  GS   M   +   L
Sbjct: 336 QFHGGAGYMEEYRICRMYTDARISRIYAGSSEIMKEIIGRSL 377


>gi|229491757|ref|ZP_04385578.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229321438|gb|EEN87238.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 384

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 144/375 (38%), Gaps = 28/375 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +W++  + P      R+    G+        +             +  YLM   E   L 
Sbjct: 31  KWEEQGYAP--REFYRKLGELGVMGFDIPEEYGGAG-------ATSYRYLMIIGEEAALA 81

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+ +    A +  P     +   + + +               + + +TE   G+D+A
Sbjct: 82  GVSLGNYHASAGIVLP-----YLLTLANEDQKKRWLPACASGQAVLAVAMTEPGTGSDLA 136

Query: 213 AITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268
           AI +  +   DG  Y L+G K F+++   +   +++A+    G      +   + D    
Sbjct: 137 AIRTTAKLSDDGESYILNGAKTFITNASQATHMVVVARTGDPGENRRGGLSLFVVDTESA 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +KIG + + T E+ F+N    +   LG+   +   +        L  A    
Sbjct: 197 GFEVGRRLDKIGLKFSDTCEVSFTNVRVPVTDVLGEEGAAFSYLGQNLPRERLAMAAGGC 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +    ++A A+ Y   R V G  + D    K  +A+ A D+AA   +        D  + 
Sbjct: 257 ATAAAAIAHAVSYTSDRRVFGKPVADFQNTKFVLAECATDLAAGQTMVDHAVALEDAGEL 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + +AA       I K +C +MA  VI + ++  GG GYI E  IAR Y ++  + I  G
Sbjct: 317 SAVDAA-------ICKLFCTEMAGRVIDKCLQLHGGYGYILEYPIARLYADTRVSRIYGG 369

Query: 446 SGNAMVLDVLNLLEK 460
           +   M   +   L +
Sbjct: 370 TSEVMKTIIAKSLSR 384


>gi|126737840|ref|ZP_01753570.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126721233|gb|EBA17937.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 406

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/432 (19%), Positives = 156/432 (36%), Gaps = 46/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L       P  +  +L    E ++S +A+  A+      P++       E ++  E  
Sbjct: 13  PNLGRFNWEDPLRLEDQLTED-ERMISASARAYAQ--EKLQPRVT------EAYENEETD 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSA 159
           PA    +      GL  +     +  +          AR           +MS  S    
Sbjct: 64  PAIFREMG---EMGLLGTTIPEEYGGLGGGYVSYGLVAREVERVDSGYRSMMSVQSSLVM 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + PK+ S E+                 GLTE   G+D A++ ++ +
Sbjct: 121 YPIYAYGSEEQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPASMKTRAE 167

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K ++G        W  ++P++D F++ A+ +   G   +   + +    GL   ++KNK 
Sbjct: 168 KTANGYKLTGSKMWISNAPIADVFVVWAKSDEHGGK--IRGFVLEKGMQGLSAPKIKNKA 225

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+             +     V+ +K     L+ A   +S   +  AEA  +
Sbjct: 226 SLRASITGEIVMDGVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGAMGAAEACWH 281

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + R     R   G  L +  + +  +A++  +I      S R+    DEA +       A
Sbjct: 282 SARQYGLDRQQFGRPLANTQLFQLKLANMQTEITLGLQASLRVGRLMDEANA-------A 334

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  I K   C  A  +   A +  GG+G   E ++ RH       +   G+ +   L 
Sbjct: 335 PEMISIVKRNNCGKALEIARNARDMHGGNGISLEFNVIRHMVNLETVNTYEGTHDVHAL- 393

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 394 ILGRAQTGLQAF 405


>gi|67541170|ref|XP_664359.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4]
 gi|40739383|gb|EAA58573.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4]
 gi|259480348|tpe|CBF71395.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_5G09980) [Aspergillus nidulans FGSC A4]
          Length = 643

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 123/596 (20%), Positives = 222/596 (37%), Gaps = 82/596 (13%)

Query: 28  PPLFIGMNAYSSDSLLVALIA----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           P      N +++D  L  ++     +    +   L  LG+  +S    E +  A  N P 
Sbjct: 18  PAPLG--NTFTTDPSLRRILEWYIPHHVDALSPHLTRLGDEAVSAKIHEWSADAERNLPY 75

Query: 84  LHAYGPGGER--WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +  Y   GER   D++     W  L      +GL     D        K+    + A  Y
Sbjct: 76  VKWYNVWGERYGVDRLVTSEGWKRLGAWGAENGLRREC-DLLMADKYGKERRMAQYAVNY 134

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +            S+T     AL+ +  + +   P+    +            +   G  
Sbjct: 135 MTGPSSGLTSCPASMTDG--AALILSNEIARRSLPQDHPFQVALRRLTSRGTDAWTSGQW 192

Query: 202 LTEKRGGTDIAAITSQGQ----------------KISDGIYCLSGHKWFLSSPMSDAFIM 245
           +TE+ GG+D+    +                   +I +G Y ++G K+F S+  ++  ++
Sbjct: 193 MTERAGGSDVQNTETWATYSPLPASELRNATGQPQIDEGEYLVNGFKFFSSATDANIALL 252

Query: 246 LAQVE--GRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           LA+    G++  FL P  R + D         NG+   RLKNK+G +   T ELE  +  
Sbjct: 253 LAKTTPSGKLSVFLAPLRRTITDKDGKRHEVSNGVRIHRLKNKMGTKELPTAELELVDMR 312

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+GDL+     +  +  +    + + S+   R +L+ A  +A+ R   G  L   P+ 
Sbjct: 313 AHLVGDLDRGVQTIAPLLNITRAHTFLGSLGNWRRALSIAKAFAKTRTTVGEPLWLIPMH 372

Query: 356 KRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR-------------IMAPIT 400
            R +A++     A   L+F      D  E K+R  +   A               +  ++
Sbjct: 373 LRLMAELEGRHRAGMELAFFTIAVMDLVENKTRDGQRELAHLPRAGAEANTVFRTLTALS 432

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDVL 455
           K    KMA   + E  E +GG GY++     E +++R  R +  NSI  G+ N +  + +
Sbjct: 433 KAVISKMAVVGVQECQEAMGGVGYMDEPDEPEFNVSRILRNTFVNSIWEGTTNVLASECV 492

Query: 456 NLLEKGTNLFEQLFSTLEQDL----------GSSGKKVITILRDSISLCKEDKGL----A 501
             L KG N F+ L   +E+ +          G   +   T  +   +  ++   L    A
Sbjct: 493 RFLLKGEN-FDVLAGWVERVMRLLGDGAVPDGLGLRSAWTAFKARFTSLQDSPALAVADA 551

Query: 502 RFLTEKIALASSAAALY----RAGMN---DIADVFLENRFLDN---CHSTHCMLHG 547
           R +   +A   +   L     R G     +IA  ++  +             +  G
Sbjct: 552 RRVMFTLAWILAGTLLVLDARRDGDAVTGEIARRWVSGQLGVGDTVWRDVVGIYPG 607


>gi|330505673|ref|YP_004382542.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328919959|gb|AEB60790.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 392

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +AQ+ A         L A+          +  P    + R     GL  +    
Sbjct: 22  ERMVRDSAQQFADD-KLAPRVLEAFR-------HEQTDP---KIFREMGETGLLGATIPE 70

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 71  AYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGNEATKQKYLPKLASG 130

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 131 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVEGGYRLTGSKMWITNSPIAD 177

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 178 VFVVWAKDDAGE----IRGFVLEKGWQGLSAPAIHGKVGLRASITGEIVMDNVFCPEENA 233

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R+  G  L    
Sbjct: 234 FPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRNQFGRPLAANQ 287

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  +  
Sbjct: 288 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDIAR 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 341 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 391


>gi|325118829|emb|CBZ54381.1| putative 2-methylbutyryl-CoA dehydrogenase [Neospora caninum
           Liverpool]
          Length = 379

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 142/385 (36%), Gaps = 50/385 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
            ++      G      D  +        + +               L+    T  +  + 
Sbjct: 10  EIIEGLFKQGYLGMEIDEKYGGSGMPFFNSLVVIEELSKVDPSVAALVDIHNTLINRALT 69

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--I 221
           L  T    + + P++ S              S+     L+E   G+D  A+ +  ++   
Sbjct: 70  LYGTDEQKEKYLPQLAS--------------SMLGSFCLSESESGSDAFALKATARRSEN 115

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D        +W  ++  +  F++ A  +   G   +   L +    GL       K+G 
Sbjct: 116 GDAWVLNGSKQWISTAREAGLFVVFASYDLDQGYRGITAFLVEAGTAGLDVGPPLEKLGI 175

Query: 282 RSNATVELEFSNTFGFL--------------------LGDLNVSTGPVEDMKILIYL-DS 320
           ++++T E+  ++    +                    + D  V     E  KI I L + 
Sbjct: 176 KASSTCEVVLNDVQACMHVAIMTLKNADKIQGFFYIQVHDSCVLGEVGEGYKIAIRLLNE 235

Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + ++   + LA      A+ Y   R   G  + D   ++   A +A +I AA  L++ 
Sbjct: 236 GRIGIAAQMLGLAKGAFEMAMTYMHDRQQFGKRIADFQGVRFEYAKLATEIEAAALLTYN 295

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   +  +  +++AA A++ A        ++A +V    ++ +GG+G+ +E  +A+ +R
Sbjct: 296 AALLREAGEPFAKQAAMAKLKA-------SQVAQSVTGACIDFVGGNGFTKEFGLAKLFR 348

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           +S   +I  G+ N  +  +  +L++
Sbjct: 349 DSKIGTIYEGTSNMQLETIAKVLQR 373


>gi|118373206|ref|XP_001019797.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89301564|gb|EAR99552.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 417

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 130/361 (36%), Gaps = 35/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++++    G           P V   A+ +    +  +       L   S      + 
Sbjct: 75  KEIMKKFGQMGFLGCTISDYDLPGVSSAAYGLINREVERVDSGYRSALSVQSSLVMHPIH 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + ++   + P++ + E             +    GLTE   G+D  ++ ++ +K  D
Sbjct: 135 EFGSKQLKDIYIPRLATGE-------------LIGCFGLTEPNHGSDPGSMETRAKKDGD 181

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  +SP++D F++ A+ E G +  F++     +    GL   +++ K+  R
Sbjct: 182 DYILNGSKTWITNSPIADIFVVWAKDEQGDIRGFVL-----EKGMKGLTAPKIEGKLSLR 236

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++ T  +   N        LNV             L++A   +S   +  AE   +A R 
Sbjct: 237 ASITGMILMDNVRVHKSQMLNVKGLKG----PFSCLNNARFGISWGALGAAEYCFHAARQ 292

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R      L    ++++  AD+  +IA A     +++   D           A  M 
Sbjct: 293 YTLDRKQFNVPLASFQLIQKKFADMQTEIALALQACLQVSRLKDSGN-------LAPEMI 345

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  +  +  EA + +GG+G  +E  I RH       +   G+ +   L +   
Sbjct: 346 SLVKRNSCMKSIQICREARDMLGGNGIADEYHILRHSINLETVNTYEGTNDIHALILGRA 405

Query: 458 L 458
           +
Sbjct: 406 I 406


>gi|50084817|ref|YP_046327.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530793|emb|CAG68505.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 408

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 128/365 (35%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 66  REMGELGLLGPTIPEQYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPINEFG 125

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 126 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 172

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +   +GL    +  K+G R++ 
Sbjct: 173 LTGAKMWITNSPIADVFVVWAKEVSSEGHVGEIRGFILEKGWDGLSAPAIHGKVGLRASI 232

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   N F           G          L+SA   ++   +  AE   +  R    
Sbjct: 233 TGEIVMDNVFVPEENAFPEVRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTARQYTL 289

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I+    ++ R     DE  +       A     + 
Sbjct: 290 DRKQFGRPLAANQLIQKKLADMQTEISLGLQVALRFGRMKDEGIA-------AVEGTSLI 342

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 343 KRNNCGKALEIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 401

Query: 461 GTNLF 465
           G   F
Sbjct: 402 GIAAF 406


>gi|149370542|ref|ZP_01890231.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149356093|gb|EDM44650.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 601

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 79/465 (16%), Positives = 166/465 (35%), Gaps = 50/465 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
             +R++   G            +       +                        +M + 
Sbjct: 67  ETMRKAGELGFLSVAVPEDLGGLGMGFVSTVLTCDYISSGTGSFSTAFGAHTGIGTMPIT 126

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       K + PK+ S E+                  LTE   G+D  +  ++     D
Sbjct: 127 LYGNDEQKKKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 173

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y +SG K ++S+    D  I+ A++       +   ++E+ + NG+     ++K+G 
Sbjct: 174 GKHYLISGQKMWISNAGFCDVMIVFARIGDDK--NITGFIVENDASNGISMGEEEHKLGI 231

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEA 335
           R+++T ++ F++T   +    N+  G  E  KI +  L+   + ++       R   +EA
Sbjct: 232 RASSTRQVFFNDTKVPVD---NMLAGRGEGFKIAMNALNVGRIKLAAACLDSQRRVTSEA 288

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------AKSRSE 388
             YA  R      +     +K  +A++A       + ++R A + ++       A +  +
Sbjct: 289 AKYANERIQFKTPIASFGAIKLKLAEMATSAYVGESATYRAAKNIEDRINLRIAAGNSHQ 348

Query: 389 EAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EA         I   I K    +       E ++  GG G+ E+  +   +R++    I 
Sbjct: 349 EAELKGVEEYAIECSILKVAVSEDIQNCADEGIQIFGGMGFSEDTPMEAAWRDARIARIY 408

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISLCKEDKGLAR 502
            G+     +  + +L K             Q + +    + +    D   L  E+K + +
Sbjct: 409 EGTNEINRMLAVGMLVKKAMKGHVDLLGPAQAVATELTSIPSFETPDFSELFAEEKDMIK 468

Query: 503 FLTEKIALASSAAALYRAGMN---------DIADVFLENRFLDNC 538
            L +K+ L  + +A  + G             AD+ +E    ++ 
Sbjct: 469 KL-KKVFLMVAGSAAQKYGDKLEQHQQTLMAAADILIEIYMAESA 512


>gi|91780857|ref|YP_556064.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693517|gb|ABE36714.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 385

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 133/363 (36%), Gaps = 33/363 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  R    G    +    +  +    +           A +  G ++        MV   
Sbjct: 41  LRERMAGLGYFGILIPEEYGGLGLGVSEYCLITEELSRAWMSVGSII---RNLGLMVVQG 97

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + W P++   E+                L ++E   G+D+AA+T++     DG 
Sbjct: 98  MTDGQRQRWLPRMACGEF-------------LGALAMSEPNAGSDVAALTTRAIPDGDGW 144

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGL---CYQRLKNK 278
                  W   +  +D  +++A+     +       +   L +     L          K
Sbjct: 145 RITGSKCWCTFADGADYIVVIARTARVTDVARRHQGLSAFLIEKPRGALPAGVIGSPMPK 204

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG     T EL F + +     L+G+   +   V          +A  S+   + +L +A
Sbjct: 205 IGYYGWKTWELSFDDVYVGPETLIGEPGRAFYYVAHGLETARAHTAARSIGLAQGALEDA 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA +R   G  + D   ++  +AD+A  +  A  L   +    D      +EAA A  
Sbjct: 265 LDYATQRVQFGHPIGDFQALRFRLADMATRVETARQLLRSVCEQIDSGVRCEKEAAMA-- 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KY+  +++  V ++A++  GG+GY    ++ R++R++    I  G+    +  + 
Sbjct: 323 -----KYYAAEISETVTSDALQIHGGAGYTTHFAVERYWRDARLTKIFEGTSEIQLRIIS 377

Query: 456 NLL 458
           + L
Sbjct: 378 DHL 380


>gi|88703524|ref|ZP_01101240.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88702238|gb|EAQ99341.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 423

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 124/343 (36%), Gaps = 29/343 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHL 151
           W++    P            GL C   D ++          +        +     A   
Sbjct: 32  WEEDHLVP--REFWNTMGTAGLLCPDVDEAYGGAGTAPHVTLMLIEELSRMGFGGIATGY 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  ++   T    + W PK+ S E                 L +TE   G+D+
Sbjct: 90  GIHSNIVAPYISRHGTEEQKQQWLPKMVSGE-------------AFGALAMTEPGAGSDV 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGL 270
             I +   +  D  + L+G K F+++ +    +++A   +   G      LL D +  G 
Sbjct: 137 QGIRTSAVRDGDE-WVLNGSKIFITNGIHADIVVVAAITDPGKGAKGTSLLLVDTTLPGF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              R   KIG  ++ T +L F +       LLG+ N     + +      L  A  +V  
Sbjct: 196 EKSRKIEKIGQHTSDTAQLFFQDVRLPANALLGEENRGFVIMMEELPRERLGIAAQAVGA 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L   + Y + R   G  + +    +  +AD+   I  + AL  + A+ + +    +
Sbjct: 256 AEGALDITVDYVKERKAFGQSIGEFQNTRFKLADVKTQIGLSRALYEQCADEYAQGALTA 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           ++AA  ++         C+M  + I + ++  GG GY  E  I
Sbjct: 316 DKAAMLKLA-------SCEMQCSTIDDCLQLFGGYGYTVEYPI 351


>gi|325524811|gb|EGD02776.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 395

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 53  EIFREMGELGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMGPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K++ 
Sbjct: 113 EFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVAG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++E   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGAKMWITNSPIADVFVVWAKLE-EDGKDTIRGFILEKGWKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     D N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEVFVP---DENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|169634201|ref|YP_001707937.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169152993|emb|CAP02047.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 406

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDICGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|311104902|ref|YP_003977755.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759591|gb|ADP15040.1| acyl-CoA dehydrogenase, N-terminal domain protein 5 [Achromobacter
           xylosoxidans A8]
          Length = 379

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 132/360 (36%), Gaps = 27/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLMSPSVTSASMV 162
             L R++   G+        +        H I        A         + S   A  +
Sbjct: 42  RDLWRKAGAAGILLPSTPEEYGGGGGDFLHTIIVVEEIARALATGVTGFTTHSDIVAPYL 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               + R                 +   M +  +   + +TE   G+D+ AI +   K  
Sbjct: 102 LNFGSERQK-------------LRDLPGMAQGDIVASIAMTEPGAGSDVKAIRTAAAKAQ 148

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y ++G K F+++   +D  +++A+ +   G   +     D +  G    RL +K+G 
Sbjct: 149 GG-YVINGQKTFITNGFHADRVLVVAKTDPAAGARGISLFWVDAATPGFTRGRLLDKVGQ 207

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           ++  T EL F + F     +LG+     G +    +   L  A+     +  +L   + Y
Sbjct: 208 KAQDTAELFFQDMFVPDEDMLGEPGQGFGYLMKELVRERLMIAVRCAMALESALQWTVDY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R      LID   ++  +ADI    AA  A        + + +  +  AA A++ A 
Sbjct: 268 TKDRRAFDKALIDNQHIRFKLADIKTLAAATRAFVDGCVQQYLDGELDAGGAAMAKLWAS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                    A + I + ++  GG GY+ E  IAR Y +   N I  G+   M   +   L
Sbjct: 328 E--------ATSAIDDLLQFHGGYGYMREYPIARAYTDVRPNRIYGGASEVMRELIARTL 379


>gi|282891890|ref|ZP_06300369.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498150|gb|EFB40490.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 381

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 63/318 (19%), Positives = 126/318 (39%), Gaps = 36/318 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M+ +   A  +    + +    +   I   E  P                LTE++ G+D 
Sbjct: 85  MAVTNMVAEAIEWYGSKQQQAKYLSAIKQGESVP------------ASFALTEEQAGSDP 132

Query: 212 AAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
             I ++ +     SD  +     +   +  +S   I+ A+    +  FL+ R        
Sbjct: 133 KNIQTRAEVDLNNSDYFWINGSKRLITNGDLSGVLIVFAKTTEGISAFLIER-----GTP 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327
           G+   + + K+G  +   V L F          L       E +KI +  LDS  + V+ 
Sbjct: 188 GMEVSKTEQKLGLLTANLVGLSFDKCRVHRNQLLGKLG---EGLKIALGSLDSGRIGVAA 244

Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             + +AEA     +HY++ R   G  + +   +   +AD+ + ++AA  L  +      +
Sbjct: 245 QAIGIAEASYEAALHYSQVREQFGKKICENQAIAFELADMHVKLSAAKLLLSKACWQRVQ 304

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             S +         A   K +  ++A  + +EAM+  GG GYI++  + R++R++ A ++
Sbjct: 305 GISYTLA-------ASEAKLYASEIANEIASEAMQIFGGYGYIKDYPLERYFRDARATTL 357

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 358 YEGTSEIQRLVISRSILK 375


>gi|47209002|emb|CAF95465.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 361

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 116/347 (33%), Gaps = 32/347 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           +++++   GL      + +  +                        +  +      V L 
Sbjct: 37  IIKKAWELGLMNGHIPQEYGGMGLSIFDNCLITEELAYGCTGVQTAIEANSLGQMPVILA 96

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 K +  ++              +  +     +TE   G+D+A I ++  K+ +  
Sbjct: 97  GNDAQKKKYLGRLV-------------EEPLMCAYCVTEPGAGSDVAGIKTRAVKMGNEY 143

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  W  +   ++ + +LA+      C         + D    G+   R +  +G R
Sbjct: 144 IVNGQKMWITNGGKANWYFLLARTNPDPKCSASKAFTGFIVDADTPGIQPGRKELNMGQR 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            + T  + F +    +    NV        KI +          A  +    + +L EA 
Sbjct: 204 CSDTRGITFEDVRIPV---ENVLIAEGAGFKIAMGAFDNTRPPVAAGATGLAQRALDEAT 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G ++ +   +   +AD+A+ +  A     R A   D+    +         
Sbjct: 261 KYALERKTFGKLIAEHQAVSFMLADMAMKVELARMAYQRAAWEVDQGHRNT-------YY 313

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           A I K +   +A  V A+A++  GG+G+  +  + +  R++    + 
Sbjct: 314 ASIAKAFAGDIANQVAADAVQIFGGNGFNSDYPVEKLMRDAKIYQVY 360


>gi|290963226|ref|YP_003494408.1| acyl CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260652752|emb|CBG75885.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Streptomyces scabiei 87.22]
          Length = 381

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 76/362 (20%), Positives = 133/362 (36%), Gaps = 31/362 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSAS 160
           WH     +   G+        +             A   L   +      L   + T   
Sbjct: 43  WHE----AGALGILGLSVPEEYGGTGAGDFRFNAVADEELAGFSFGVGASLALHTDTCPP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  + T    + W P I S               +   + +TE  GG+D+AA+ +   +
Sbjct: 99  YLVELGTEEQKRRWLPGIASG-------------DLISAIAMTEPSGGSDLAALKTTAVR 145

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
              G + ++G K F+++   +D  I+ A+         +   + +    G    R  +K+
Sbjct: 146 DG-GDWLINGSKTFITNGHQADLVIVAARTGPGERAKGISLFVVEAGTPGFERGRKLDKV 204

Query: 280 GNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G     T EL F++        L  V  G V  M++L    L +A+ ++  +   L E I
Sbjct: 205 GQEEADTAELFFTDVRLPDSHRLGEVGEGFVSMMRLLPQERLSTAVTNIGHVTRLLHETI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +      K  IA++   +    A   +   +    K    +AA A+  
Sbjct: 265 AYAKERRAFGETIGSFQYNKFRIAELVTRVEVTQAYVDQCILAHTRGKLTPVDAAKAKWW 324

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A  T+        AV+ E ++  GG GY+ E  IAR +R++    I  GS   M   +  
Sbjct: 325 AAETQN-------AVLDECVQLHGGYGYMNEYRIARAWRDARVTKIWAGSNEIMKEVIGR 377

Query: 457 LL 458
            L
Sbjct: 378 DL 379


>gi|71656085|ref|XP_816595.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70881734|gb|EAN94744.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 411

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 146/364 (40%), Gaps = 36/364 (9%)

Query: 105 ALLRRSIHDGLHC-SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L+R     G+   ++ D      +   A  I    +           ++ SV   +   
Sbjct: 74  ELMRELGDLGVLGVTVSDEDGGAGMDATASVIVHHEISKCDPGFCLAYLAHSVLFVNNFY 133

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W PK+ + E+                + ++E   GTD+  +++  +K+ D
Sbjct: 134 NSATREQRERWLPKVLTGEH-------------IGAMCMSEPGAGTDVLGMSTAAKKLGD 180

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K ++++  ++D  ++ A+V+G+     +   + +    G       +K G R
Sbjct: 181 EKYVLNGCKTWITNGTVADVLLVYAKVDGK-----ITAFVVEKGTPGFTCGAKIDKCGMR 235

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI----- 336
           S+   +L F N     L   N+     + M  ++  L+   +++S M + +A+       
Sbjct: 236 SSQMCQLFFDNV---ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRCVELMT 292

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  + +   ++R IA+   +  AA AL++ ++ S     S +   + A   
Sbjct: 293 RYASERQAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSV-SPTSNNRLGSDA--- 348

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +   +A  V    M+ +GG GY  E  + R +R++    I  G+  A   ++  
Sbjct: 349 ---AKLFAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDAKLLEIGGGTIEAHQKNITK 405

Query: 457 LLEK 460
            L K
Sbjct: 406 DLMK 409


>gi|296167012|ref|ZP_06849425.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897642|gb|EFG77235.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 403

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 129/389 (33%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++  +   GL+   +  + +         + A           
Sbjct: 28  PAASEWDEREETP--WPVIAEAAKVGLYSPDF-FAQQAAEPTGLGMLTAFEEMFWGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP     W P++F    +P                 +E   G
Sbjct: 85  ALSIMGTGLAAAALAGNGTPEQLGRWLPEMFGTADEP----------KLGAFCSSEPDAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++ +     +         W  +  +++  I++A V   +G       +    
Sbjct: 135 SDVGAIRTRARYDEATNEWVLNGTKTWATNGGIANVHIVVASVYPELGTRGQATFVVPAG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP---------------VED 311
             GL   +   K G R++ T E+   N        L                        
Sbjct: 195 VAGLAQGQKFKKHGIRASHTAEVVLDNVRLPEDHILGGREKFEARIARVKSGASARSQAA 254

Query: 312 MKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I AA
Sbjct: 255 MKTFERTRPTVGAMAVGVARAAYEYALDYACQREQFGRKIGEFQAVAFKLADMKSRIDAA 314

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R        +S             + K    + A  V  EA++ +GG+GY  +  
Sbjct: 315 RLLVWRAGWMARNNQSFDAA------EGSMAKLVASETAVYVTDEAIQILGGNGYTRDYP 368

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R +R++   +I  G+     L +   L
Sbjct: 369 VERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|221201024|ref|ZP_03574064.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
           CGD2M]
 gi|221206524|ref|ZP_03579537.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221173833|gb|EEE06267.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2]
 gi|221178874|gb|EEE11281.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans
           CGD2M]
          Length = 395

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 150/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   A   A+  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTED-ERMVRDAAHAYAQ--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEQYGGPGLNYVSYGLIAREVERIDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIYEFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A+++   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYSLSGAKMWITNSPIADVFVVWAKLD-EDGKDTIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     + N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---EENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|94971873|ref|YP_593913.1| acyl-CoA dehydrogenase-like [Deinococcus geothermalis DSM 11300]
 gi|94553924|gb|ABF43839.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 598

 Score =  230 bits (587), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 97/522 (18%), Positives = 188/522 (36%), Gaps = 69/522 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A     V+ ++  L   +        AR A+ N PQ+           KV+  PA    +
Sbjct: 30  AEHSREVYDDVLNLAYTIAERYFANHAREADLNEPQVVD--------GKVKLVPAAAEAM 81

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R     G   +  D     +         A   +  A +        ++ +A++  +  +
Sbjct: 82  RAFREAGFFSAHADEELGGLQLPHVVAQAAHAHFKAANIGTSSYPFLTIGNANLQRVFAS 141

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P   + +   +    +  T             + L+E   G+ +A IT+      DG Y 
Sbjct: 142 PEQQRKYMLPLLEGRWFGT-------------MALSEPHAGSGLADITTTATPRGDGTYS 188

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLC 271
           ++G K ++S+   +       ++LA+++G       +  F+VPR   +     G  N + 
Sbjct: 189 ITGTKMWISAGEHELSENIIHLVLARIKGAPAGVKGISLFIVPRYRVNADGSLGESNNVV 248

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              L +K+G R      L F     T G L+G+     G +  M     +   + +V   
Sbjct: 249 LAGLNHKMGYRGTTNTLLNFGEGGETIGELIGEPGRGLGYMFHMMNSARIGVGMGAVMLG 308

Query: 329 RVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 ++ YAR R                 +I+   ++R +      +    AL    A
Sbjct: 309 YAGYLASLEYARERRQGRHASNKDPESEPVRIIEHADVRRLLLRQKSIVEGGLALGLYAA 368

Query: 378 NSFDE-----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +  DE     A+ R +      ++ PI K W  + +   +++A++ +GG+GY  +  +  
Sbjct: 369 HLEDEIETGPAEEREDNVLLLDLLTPIVKSWPSRYSQEALSDAIQVMGGAGYTRDYPVEM 428

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
           +YR++  N I  G+      D+L     + G      L   ++ DL +S         + 
Sbjct: 429 YYRDNRLNPIHEGTEGIQGNDLLGRKVTQAGGRGLHVLLERIQTDLQAS---------EG 479

Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532
           ++   E +        + A A  A  +         D+FL N
Sbjct: 480 LAGLAEIRAALERAVTQSAAALQA--ILSKAPELGPDLFLAN 519


>gi|198428582|ref|XP_002126870.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain
           [Ciona intestinalis]
          Length = 451

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 123/378 (32%), Gaps = 37/378 (9%)

Query: 99  FHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +H  W         L  ++   G+           +                        
Sbjct: 93  YHDQWEEEGQVSRELWLKAGDMGILGVNTPEEHGGIGGDWLSAAIVHEEQGYVNCSGPGF 152

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +    TP   + + P + +                   + +TE   G+D+
Sbjct: 153 ALHSDIVMRYITKYGTPEQIEKYIPDMTAG-------------KKIGAIAMTEPGAGSDL 199

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPN 268
             + +  +K  D  + L+G K F+++  M+D  I++A  +         +   L DG   
Sbjct: 200 QGVRTFAKKDGDD-WVLNGSKVFITNGWMADVVIVVAITDKEAKSAAHGISLFLVDGDNP 258

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
           G    +   K+G R+  T EL F +        L    G       L+       L  + 
Sbjct: 259 GFIKGKKLKKMGLRAQDTAELFFEDCRLPSSALLGGKAGLNAGFYQLMQELPQERLLISN 318

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           + ++       E   Y ++R   G  L     +K  +A+I  + A A     R  +  ++
Sbjct: 319 LCMAACEFMFEETRDYVKQRKAFGKTLSKLQTIKHTLAEIKTETAVARGFLDRCNDLHNQ 378

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K            A + KY+   +   V    ++  GG GY+ E  I + Y ++   +I
Sbjct: 379 RK-------LDTSTASMAKYYVTDLNNTVAYRCVQLHGGWGYMWEYPICKAYVDARVQTI 431

Query: 443 LLGSGNAMVLDVLNLLEK 460
             GS   M   +   +EK
Sbjct: 432 YGGSNEIMKELISRDIEK 449


>gi|120405043|ref|YP_954872.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957861|gb|ABM14866.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 386

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 137/377 (36%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   + D+    P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAKHDEEHSFP--YEVVAGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V    T    ++W P + S                    GLTE  G
Sbjct: 89  AITLEAGVSLGAMPVYRFGTEAQKQEWLPLLASG-------------KALGAFGLTEAGG 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLVPRLLED 264
           G+D  A  +   ++ DG + ++G K F+++  +D      + A      G   +  +L  
Sbjct: 136 GSDAGATKTTA-RLDDGHWVINGSKQFITNSGTDITKLVTVTAVTGETDGKKEISSILVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   +   NK+G  ++ T  L F +        L     G    ++IL    +  A
Sbjct: 195 VPTPGFTAEPAYNKVGWNASDTHPLSFDDVRVPQENLLGERGRGYAGFLRILDEGRIAIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ YA+ RH  G  +     +   IA +     AA A  +  A    
Sbjct: 255 ALSVGAAQGCVDESVKYAKERHAFGRAIGTNQAIAFKIARMEARAHAARAAYYDAAALML 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   + AA       + K    + A     +A +  GG G++ E  +ARHYR+S    
Sbjct: 315 AGKPFKKAAA-------VAKLVSSEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 368 IGEGTTEVQLMLIGREL 384


>gi|24213138|ref|NP_710619.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193845|gb|AAN47637.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 565

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 110/497 (22%), Positives = 201/497 (40%), Gaps = 38/497 (7%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH--------KELEL 60
           +   NQ   P  + F ++      G N Y  D +L  L+  +             + L  
Sbjct: 2   QYPFNQSTNPGLAPFDISNYKGNRGKNFYEEDRVLQTLVEKYSKGYDSTHKKAMIEHLLG 61

Query: 61  LGEYVLSCTAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
            G  V      EL   ++      ++  Y   G R D V +        + S   G+   
Sbjct: 62  YGALVGG-ILDELTEASHKEGKYGEIVKYDRTGNRIDAVVYSNEQKLSRKISYDYGIVNL 120

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWA 175
            +  S++          R A  YL  Q   G +  P   +  M+ ++    T    + + 
Sbjct: 121 NYHSSWK---HPFTDLHRYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEKYL 177

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + + E   ++           G  +TE+ GG++++A  +  +K  +G + L+G KWF 
Sbjct: 178 P-LVAGEGSQSH--------FMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFC 228

Query: 236 SSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           S+P  D ++  A+VE    +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ +  
Sbjct: 229 SNPG-DLWVTTARVEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDG 287

Query: 294 TFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LG        +    I I  L  +I +    R +  EA  YA+ R   G  +++ 
Sbjct: 288 VEAEALGRPAHGIANLIKYVIGISRLHVSIAASGISRRAWTEAYEYAKFRTAYGSKILEF 347

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             + + ++D  L   A     FR  ++ +  K   E      ++AP+ KY C   +  + 
Sbjct: 348 SSLLKQLSDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEIT 401

Query: 413 AEAMECIGGSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             ++  +GG+G + +   + R + +S  N    G+   +   VL   ++   + +  F  
Sbjct: 402 YNSILVLGGNGIVGDFSPLPRLHNDSIINETWEGTHLLLSEHVLRGFKRE-KVAKAFFKY 460

Query: 472 LEQDLGSSGKKVITILR 488
           +E+    +     TIL+
Sbjct: 461 VEEITDPNSVAAETILK 477


>gi|326477649|gb|EGE01659.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 618

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 127/558 (22%), Positives = 209/558 (37%), Gaps = 89/558 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    +       D++L  +++       P  + K+       V+S    + 
Sbjct: 4   SSSTEGFFQVQPLVQP-QIQEDAVLRRIVSLHLPSPLPPSLEKDFTRFSSLVISKPVLDY 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W AL   +I +GL          P     
Sbjct: 63  AADAERNQPYLKPLSTFGTENKRDPLVTGEGWRALQDINIREGLVGLA------PEPGLT 116

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR---------- 181
            H+ +      +++    HL +PS       A++T P    D A K+ SR          
Sbjct: 117 GHRTQW--NTRVSKGIKTHLWTPSS------AMVTCPGSMTDGAAKLLSRHLDSENGRIF 168

Query: 182 -EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI-------- 225
            E      +     +   G  +TE+ GG+D+    +  +K         DG+        
Sbjct: 169 AEALKRLTSRDPAIAWTSGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSTGMPLG 228

Query: 226 -YCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-------RLLEDGSPNGLCYQRLK 276
            + L G KWF S+  ++  IMLA+  E  +  F  P       +  ++   NG+  QRLK
Sbjct: 229 PWRLDGFKWFSSATDANMSIMLAKTGEDSISAFYAPLRRQVKGKDPQESELNGVRIQRLK 288

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK G ++  T ELE     G+L+G        +  +  +    + I SVS    SLA   
Sbjct: 289 NKFGTKALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICR 348

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF-----------------RLANS 379
            Y++ R  SG +L D P   R +A   +  AA+  L+F                   A  
Sbjct: 349 AYSKVRVTSGRLLRDTPSYVRTLARDHVKYAASMHLTFFVVVLLGISEGSNCCSCMAAQI 408

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYR 435
               + ++   A  R++ P+ K      A   +  +ME +GG GY+E       IAR +R
Sbjct: 409 NILPRDKNHTLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFR 468

Query: 436 ESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++   SI  G+   M  DV+ +++  KG +    L   +   L          +  + S 
Sbjct: 469 DTCVLSIWEGTTEVMADDVMRVVKGSKGPDCLNALDKWVAHGL---------RVAMTHSF 519

Query: 494 CKEDKGLARFLTEKIALA 511
             E   L +   E ++ A
Sbjct: 520 TDEAVVLQQLWAEFLSYA 537


>gi|325124630|gb|ADY84153.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 406

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 126/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA    ++ R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|288923184|ref|ZP_06417328.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345470|gb|EFC79855.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 398

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 140/384 (36%), Gaps = 34/384 (8%)

Query: 95  DKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            ++E    +   ++      G+   +    +  +                  +    +++
Sbjct: 34  QELEHADEYPQEIVDGLKELGVFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGVIN 93

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A M+    TP   + + P++ + E             V     ++E   G+D++A
Sbjct: 94  THFIMAYMLMQHGTPEQKQKYLPRMATGE-------------VRGAFSMSEPGLGSDVSA 140

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV-------GCFLVPRLLEDG 265
           ++++  K +DG Y ++G K +L++  +   + +L + +            FL+ +    G
Sbjct: 141 VSTKATKQADGSYSITGQKMWLTNGATSTLVALLCKTDEGADSVYRNMTTFLLEKEAGFG 200

Query: 266 SP-NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               G+      +K+G +   T EL            L G        V D   +  ++ 
Sbjct: 201 ETAQGVTVPGKIDKMGYKGVETTELLLDGHQIAAEQILGGQPGKGFFHVMDGVEVGRVNV 260

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +          A+ YA++R   G ++ D   +   IAD+A  +  A  +  R A   
Sbjct: 261 AARACGLAWRGFELAVAYAQQRRTFGKVIADHQAVLFRIADMATKVETAHTMMVRAARLK 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +    EA  A+++A        + A  V+ ++    GG GY +E  I R  RE    
Sbjct: 321 ETGRRMDVEAGMAKMVA-------SEYANEVVEDSFRIHGGYGYSKEYEIERLMREVKFM 373

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            I  G+ +   + +   L K   L
Sbjct: 374 LIGEGTSDIQKMIIGRALLKDYQL 397


>gi|83718837|ref|YP_441936.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|257138109|ref|ZP_05586371.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
 gi|83652662|gb|ABC36725.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264]
          Length = 395

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 132/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL       ++             AR           +MS  S      + 
Sbjct: 53  AIFREMGEVGLLGPTIPEAYGGPGLSYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYALSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGWKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEVFVP---EENILPNVKGLRGPFTCLNSARYGIAWGALGAAESCWHTARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDECTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|45656282|ref|YP_000368.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599516|gb|AAS69005.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 565

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 109/497 (21%), Positives = 200/497 (40%), Gaps = 38/497 (7%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVH--------KELEL 60
           +   NQ   P  + F ++      G N Y  D +L  L+  +             + L  
Sbjct: 2   QYPFNQSTNPGLAPFDISNYKGNRGKNFYEEDRVLQTLVEKYSKGYDSTHKKAMIEHLLG 61

Query: 61  LGEYVLSCTAQELARMANYNT--PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
            G  V      EL   ++      ++  Y   G R D V +        + S   G+   
Sbjct: 62  YGALVGG-ILDELTEASHKEGKYGEIVKYDRTGNRIDAVVYSNEQKLSRKISYDYGIVNL 120

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWA 175
            +  S++          R A  YL  Q   G +  P   +  M+ ++    T    + + 
Sbjct: 121 NYHSSWK---HPFTDLHRYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEKYL 177

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + + E   ++           G  +TE+ GG++++A  +  +K  +G + L+G KWF 
Sbjct: 178 P-LVAGEGSQSH--------FMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFC 228

Query: 236 SSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           S+P  D ++  A+VE    +G FLVPR+ +DG+ NG    R K+ IG+R   TVE+ +  
Sbjct: 229 SNPG-DLWVTTARVEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDG 287

Query: 294 TFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LG        +    I I  L  +I +    R +  EA  YA+ R   G  +++ 
Sbjct: 288 VEAEALGRPAHGIANLIKYVIGISRLHVSIAASGISRRAWMEAYEYAKFRTAYGSKILEF 347

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             + + ++D  L   A     FR  ++ +  K   E      ++AP+ KY C   +  + 
Sbjct: 348 SSLLKQLSDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEIT 401

Query: 413 AEAMECIGGSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
             ++  +GG+G + +   + R + +S  N    G+   +   VL   ++   + +  F  
Sbjct: 402 YNSILVLGGNGIVGDFSPLPRLHNDSIINETWEGTHLLLSEHVLRGFKRE-KVAKAFFKY 460

Query: 472 LEQDLGSSGKKVITILR 488
           +E+    +     T L+
Sbjct: 461 VEEITDPNSVAAETTLK 477


>gi|237836953|ref|XP_002367774.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|211965438|gb|EEB00634.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|221505076|gb|EEE30730.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
          Length = 409

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 130/387 (33%), Gaps = 42/387 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   +WDK    P    L       GL           +     +H I    +   +   
Sbjct: 35  PYATKWDKENSFP--KHLFPLIGSFGLLGPTAPEDHGGLGLDFLSHVIIMEEISRASAGI 92

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP       P +              + +    L ++E   
Sbjct: 93  GLSYGAHSNLCINQITRWGTPEQQGRLLPGLI-------------RGNAVGALAMSEPEA 139

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---------GRVGCFL 257
           G+D+  + SQ  +  DG Y L G K W  +  ++D  I+ A+                  
Sbjct: 140 GSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEIQEVPAKAGSSRS 199

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V  ++ +   +GL   +  +K+G R + T  L F +     +   N+     +  KIL+ 
Sbjct: 200 VTAVIVENGMDGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNILGTTGDGAKILMS 256

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A   +  M   L   + Y   R   G  + +  +M+  +AD+        A
Sbjct: 257 GLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGKLADVYSAFITHRA 316

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A S+ E  +   +          +   C + A  V  + ++ +GG+GY  E    
Sbjct: 317 FLYSVARSYSEGSAGRAD-------CASSILCCAEKATQVALDTIQMLGGNGYTNEYPAG 369

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R  R+S    I  G+     + +   L
Sbjct: 370 RLLRDSKLYEIGAGTSEIRRMLIAREL 396


>gi|111219905|ref|YP_710699.1| acyl coenzyme A dehydrogenase [Frankia alni ACN14a]
 gi|111147437|emb|CAJ59087.1| acyl coenzyme A dehydrogenase (partial) [Frankia alni ACN14a]
          Length = 406

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 137/372 (36%), Gaps = 34/372 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+V     WH     +   G      D           ++  A  +  ++++ AG   S 
Sbjct: 59  DRVIAREVWHE----AGRAGFLGLGVDEEHGG-SGIHDYRFNAVWVEELSKVSAGVASSF 113

Query: 155 SVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           SV +   A  VA +TT    K W P   S E                 +G+TE   G+D+
Sbjct: 114 SVHTDIVAPYVAGLTTQDQQKRWLPAFCSGEM-------------VAAIGMTEPAAGSDL 160

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVE-GRVGCFLVPRLLEDGSPNG 269
           AA+ +         + ++G K F+++  S  F++L A+ + G      +          G
Sbjct: 161 AALRTTAVPDGSD-WIINGSKTFITNGYSADFVVLAARTDPGAKAARGITLFGVTADTPG 219

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G   + T EL F++       ++G+++     + +      +  A+ S++
Sbjct: 220 FSRGRKLHKVGQPESDTAELFFTDMRVPADAVIGEVDRGFPRMMERLPQERISVAVSSIA 279

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L E + Y   R   G  +      K  +A++   I    A       +       
Sbjct: 280 HATQILGETLAYVAERKAFGAAIGSFQHNKFLLAELVTKIDVTQAFVDSCVAAHSRGNLS 339

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + +AA A+        W  ++  AV+   ++  GG GY+ E   A+ + +     I  G+
Sbjct: 340 AVDAAKAKW-------WSSEVQNAVLDACVQLHGGYGYMTEYRAAQAWMDGRVTKIWAGT 392

Query: 447 GNAMVLDVLNLL 458
              M   +   L
Sbjct: 393 NEIMKEIIGRSL 404


>gi|262281483|ref|ZP_06059263.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262257071|gb|EEY75809.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 406

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 126/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEVRGLR---GPFTCLNSARYGIAWGAMGAAEFCWHTAHRYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA    ++ R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQTEIALGLQIALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|322819443|gb|EFZ26564.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 411

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 142/369 (38%), Gaps = 46/369 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV-- 162
            L+R     G+                A     A + +  ++            A  V  
Sbjct: 74  ELMRELGDLGVLGVTVSDEDG-----GAGMDATASVIVHHEISKCDPGFCLAYLAHSVLF 128

Query: 163 ----ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
                   T    + W PK+ + E+                + ++E   GTD+  +++  
Sbjct: 129 VNNFYNSATREQRERWLPKVLTGEH-------------IGAMCMSEPGAGTDVLGMSTAA 175

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K+ D  Y L+G K ++++  ++D  ++ A+V+G+     +   + +    G       +
Sbjct: 176 KKLGDEKYVLNGCKTWITNGTVADVLLVYAKVDGK-----ITAFVVEKGTPGFTCGTKID 230

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI 336
           K G RS+   +L F N     L   N+     + M  ++  L+   +++S M + +A+  
Sbjct: 231 KCGMRSSQMCQLFFDNV---ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRC 287

Query: 337 -----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 YA  R   G  + +   ++R IA+   +  AA AL++ ++ S     S +   +
Sbjct: 288 VELMTRYASERQAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSV-SPTSNNRLGS 346

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +   +A  V    M+ +GG GY  E  + R +R++    I  G+  A  
Sbjct: 347 DA------AKLFAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDAKLLEIGGGTIEAHQ 400

Query: 452 LDVLNLLEK 460
            ++   L K
Sbjct: 401 KNITKDLMK 409


>gi|120401247|ref|YP_951076.1| butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
 gi|119954065|gb|ABM11070.1| Butyryl-CoA dehydrogenase [Mycobacterium vanbaalenii PYR-1]
          Length = 385

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 133/366 (36%), Gaps = 29/366 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++     G+       S           +   +      +     M      
Sbjct: 37  YPEAWIEKMK---QIGIFGLAIPESEGGAPVSTRCYVLVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A +++L  T    + + P             PM    +   + LTE  GG+D+ A+++  
Sbjct: 94  AKLLSLFGTDEQKQRYLP-------------PMATGELRATMALTEPGGGSDLQAMSTVA 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
           ++  D +       W  ++  S    +L + +         +  +L D   +GL   R  
Sbjct: 141 RRDGDELVISGAKTWISNARRSGLIALLCKTDPEATPRHSGISVVLVDNPTDGLTVSRDL 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVSL 332
            K+G +   + EL F          L      G  + MK L    +  A  ++     +L
Sbjct: 201 PKLGYKGVESCELTFDGCRVPESAILGGAAGRGFAQMMKGLETGRIQVASRALGVASAAL 260

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+ YA+ R   G  +     +   +AD+A  + AA  L+   A+ +D         A 
Sbjct: 261 ADALAYAQDRESFGQPIWKHQAVGHYLADMATKLTAARQLTLYAADRYDSG-------AR 313

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A + A + K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+      
Sbjct: 314 ADMEAGMAKLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRN 373

Query: 453 DVLNLL 458
            +   L
Sbjct: 374 VIAGQL 379


>gi|254282994|ref|ZP_04957962.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
 gi|219679197|gb|EED35546.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
          Length = 391

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 142/386 (36%), Gaps = 35/386 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHK 134
           +A    P +  +   G   D+  F        +++   G      D ++  +       +
Sbjct: 21  LAETVVPHMEHWRAQGI-VDRSVF--------QKAGEQGFLMVWPDEAYGGLGDDDFRFE 71

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                    A+         S           +P   + + PK  S E            
Sbjct: 72  QIIIEEAAYARTSDWFSSLHSRLVGPYFTRFGSPEQCQRYLPKCVSGE------------ 119

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
              + + +TE   G+D+A I +   +  D  + L+G K ++S+ + +D  I+ A+ + + 
Sbjct: 120 -SILAIAMTEPDAGSDLAGIRTSATEHPDH-WVLNGQKTYISNGINADVVIVAAKTKPQQ 177

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
             + +   + +    G    R   K+G ++  T EL F+        +LG+       + 
Sbjct: 178 DPYHLTLFIVERGMPGFERGRNLKKMGMKAQDTAELFFNEVVVPKDQVLGEPGRGFAYLM 237

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +      L  A+  ++  ++S      + R R   G  +      + A+A++  ++  A 
Sbjct: 238 EGLAEERLIGAVAYLASAQLSWDLTADFVRSRKAFGKAVASFQNTQFALAELRTELDVAQ 297

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +   +F+     + +AA +++M         ++        ++  GG+GY++E  I
Sbjct: 298 CYIDQQVAAFNAGCLTAVDAAKSKLMT-------SELQVKAADIGVQLHGGAGYMDEYPI 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456
           +R + ++  + I  G+   M L +  
Sbjct: 351 SRQFTDARISPIYAGTSEIMKLIIGR 376


>gi|291299837|ref|YP_003511115.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569057|gb|ADD42022.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 385

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 136/373 (36%), Gaps = 33/373 (8%)

Query: 94  WDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           WD+ E   PA   L+ R    G         +        H      +  + + ++    
Sbjct: 31  WDRAEAMDPA---LVPRLGELGFLGMTIGEEYGGSGGD--HLTYCLVMEELGRGDSAVRG 85

Query: 153 SPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             SV+     + +A        + W P++ S                     LTE   G+
Sbjct: 86  VVSVSLGLVGTTIARYGDDAQKRQWLPRLTSG-------------QDLGCFALTEPDVGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPN 268
           D A +T++  +  D        ++  +  ++   ++ A+ +    G   +   L      
Sbjct: 133 DAAHLTTRAVRDGDDWLLTGTKRFITNGTLASVALVFARTDPDEPGHRGITAFLVPTDAE 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSV 325
           G   + +  K+G R+ AT E             L  +  G    M  L    +  A   V
Sbjct: 193 GFGRKEIDGKLGLRAQATAEFHLDAVRVPDSARLGALGKGFSIAMAALAKGRMSVAAGCV 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  A+ YA+ R   G  +    +++  ++ IA+++ AA  L +R+A+  D    
Sbjct: 253 GIAQGCLDAAVGYAKDRVQFGKPIAAHQLVQELLSGIAVNVDAARLLVWRVADHIDRGLD 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  ++ A       K +  + A A   +A++  GG GY++E  + ++ R++   ++  G
Sbjct: 313 YAAASSMA-------KLFASEAAVAAAGDALQVFGGYGYVDEYPVGKYLRDARVMTLYEG 365

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 366 TSQIQKLLIGRAL 378


>gi|218673125|ref|ZP_03522794.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 131/369 (35%), Gaps = 36/369 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSP 154
             +  PA    +      GL        +        A+ + A  +  +       +   
Sbjct: 49  HEKTDPAIFREMG---ELGLLGPTISPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQ 105

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ S E+                 GLTE   G+D  ++
Sbjct: 106 SSLVMVPIETFGSEAQKQKYLPKLASGEW-------------IGCFGLTEPDHGSDPGSM 152

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +K+  G        W  ++P++D F++ A+ E      L+   + +    GL    
Sbjct: 153 ATRAKKVDGGYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPA 208

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +  K+G R++ T E+     F     + N+  G          L+SA   ++   +  AE
Sbjct: 209 IHGKVGLRASITGEMVMDAVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAE 265

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y   R   G  L    ++++ +AD+A +I+       RL    +E     E 
Sbjct: 266 DCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE- 324

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 +  I K   C  A  +   + + +GG+G  +E  IARH       +   G+ + 
Sbjct: 325 ------LTSILKRNSCGKALDIARASRDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDI 378

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 379 HALIIGRAI 387


>gi|184156982|ref|YP_001845321.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|183208576|gb|ACC55974.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|322506879|gb|ADX02333.1| Glutaryl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
 gi|323516749|gb|ADX91130.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 403

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 61  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 120

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 121 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 167

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 168 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 227

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 228 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 284

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 285 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 338 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 396

Query: 461 GTNLF 465
           G   F
Sbjct: 397 GIAAF 401


>gi|240169351|ref|ZP_04748010.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 382

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A  
Sbjct: 114 PTLAGGKIGALAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  ++ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAAGVSLVVVEKGTPGFEVSRKLDKMGWRSSDTAELSYTDVRVPAANLVGGENTGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIGLAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQAVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       ++               K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRHVVERQLAGETN------LIAQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR+     I  G+   +      LL
Sbjct: 347 ESEVERQYRDMRILGIGGGTTEILTALAAKLL 378


>gi|298489400|ref|ZP_07007411.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298155974|gb|EFH97083.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 393

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 145/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA++ A  +      L A+          +  PA    +      GL  +    
Sbjct: 23  ERMVRDTAEQFA-QSKLAPRVLEAFR-------HEKTDPAIFREMG---EVGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           +F             AR           +MS  S      +    T    + + PK+ S 
Sbjct: 72  AFGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGTQAQKEKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  A+ ++ + +  G        W  +SP++D
Sbjct: 132 EW-------------IGCFGLTEPNHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASITGEIVMDNVFVPEENI 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             ++    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPNVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  +  +  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  IARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|221481999|gb|EEE20365.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
          Length = 409

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 130/387 (33%), Gaps = 42/387 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLE 147
           P   +WDK    P    L       GL           +     +H I    +   +   
Sbjct: 35  PYATKWDKENSFP--KHLFPLIGSFGLLGPTAPEDHGGLGLDFLSHVIIMEEISRASAGI 92

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                + S    + +    TP       P +              + +    L ++E   
Sbjct: 93  GLSYGAHSNLCINQITRWGTPEQQGRLLPGLI-------------RGNAVGALAMSEPEA 139

Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---------GRVGCFL 257
           G+D+  + SQ  +  DG Y L G K W  +  ++D  I+ A+                  
Sbjct: 140 GSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEIQEVPAKAGSSRS 199

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
           V  ++ +   +GL   +  +K+G R + T  L F +     +   N+     +  KIL+ 
Sbjct: 200 VTAVIVENGMDGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNILGTTGDGAKILMS 256

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A   +  M   L   + Y   R   G  + +  +M+  +AD+        A
Sbjct: 257 GLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGKLADVYSAFITHRA 316

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             + +A S+ E  +   +          +   C + A  V  + ++ +GG+GY  E    
Sbjct: 317 FLYSVARSYSEGSAGRAD-------CASSILCCAEKATQVALDTIQMLGGNGYTNEYPAG 369

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R  R+S    I  G+     + +   L
Sbjct: 370 RLLRDSKLYEIGAGTSEIRRMLIAREL 396


>gi|53720357|ref|YP_109343.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           K96243]
 gi|52210771|emb|CAH36755.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           K96243]
          Length = 413

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 71  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 130

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 131 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 177

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 178 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 236

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 237 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 293

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 294 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 346

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 347 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 405

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 406 QTGIQAF 412


>gi|330815686|ref|YP_004359391.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327368079|gb|AEA59435.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 130/364 (35%), Gaps = 31/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             AR           +MS  S      +    
Sbjct: 56  REMGEIGLLGPTIPEQYGGPGLNYVSYGLIAREVERIDSGYRSMMSVQSSLVMVPIFEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ S E+                 GLTE   G+D  ++ ++ +K++ G  
Sbjct: 116 SEAQKQKYLPKLASGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVAGGYA 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R++ T
Sbjct: 163 LSGAKMWITNSPIADVFVVWAKLD-EDGKDTIRGFILEKGWKGLSAPAIHGKVGLRASIT 221

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+     F     + N+             L+SA   ++   +  AE+  +  R     
Sbjct: 222 GEIVLDEVFVP---EENLLPEVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLD 278

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K
Sbjct: 279 RQQFGRPLAANQLVQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIVK 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G
Sbjct: 332 RNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTG 390

Query: 462 TNLF 465
              F
Sbjct: 391 IQAF 394


>gi|163736443|ref|ZP_02143862.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
 gi|163743311|ref|ZP_02150692.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161383499|gb|EDQ07887.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161390313|gb|EDQ14663.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           BS107]
          Length = 406

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 86/445 (19%), Positives = 152/445 (34%), Gaps = 58/445 (13%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
            P     N    D L           + ++     E +++ +A+  A+        L+AY
Sbjct: 12  APDLGQFNW--DDPL------RLDDQLSED-----ERMIAASARSYAQE-KLQPRVLNAY 57

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                  +  E  P    + R     GL  +     +  +          AR        
Sbjct: 58  -------ENEETDP---EIFREMGEMGLLGTTIPEQYGGLGAGYVSYGLVAREVERVDSG 107

Query: 148 AGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              +MS  S      +    +    + + PK+ S E+                 GLTE  
Sbjct: 108 YRSMMSVQSSLVMYPIYAYGSEEQRQKYLPKLSSGEW-------------IGCFGLTEPD 154

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++ +K   G        W  ++P++D F++ A+ E   G   +   + +  
Sbjct: 155 AGSDPAGMKTRAEKTDGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKG 212

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             GL   ++ NK   R++ T E+             +     VE +K     L+ A   +
Sbjct: 213 MKGLSAPKIANKASLRASITGEIVMDGVEV----GDDALLPHVEGLKGPFGCLNRARYGI 268

Query: 326 SGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S   +  AEA  +A R     R   G  L +  + +  +A++  +I      S R+    
Sbjct: 269 SWGAMGAAEACWHAARQYGLDRKQFGRPLANTQLFQLKLANMQTEITLGLQASLRVGRLM 328

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DEA +       A  M  I K   C  A  +   A +  GG+G   E  + RH       
Sbjct: 329 DEANA-------APEMISIVKRNNCGKALEIARHARDMHGGNGISLEFGVIRHMVNLETV 381

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF 465
           +   G+ +   L +L   + G   F
Sbjct: 382 NTYEGTHDVHAL-ILGRAQTGLQAF 405


>gi|170732135|ref|YP_001764082.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169815377|gb|ACA89960.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 151/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   AQ  A+  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTEE-ERMVRDAAQAYAQ--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIFEFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A++E   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYALSGAKMWITNSPIADVFVVWAKLE-ENGKDAIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     + N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---EENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|115350748|ref|YP_772587.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115280736|gb|ABI86253.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 139/404 (34%), Gaps = 38/404 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A    Y   +L        R ++ +       + R     GL        +   
Sbjct: 23  RMVRDAAHA--YAQDKLAPRVTEAFRHERTDI-----EIFREMGEVGLLGPTIPEEYGGP 75

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                     AR           +MS  S      +    +    + + PK+ + E+   
Sbjct: 76  GLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLATGEW--- 132

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D   + ++ +K+  G        W  +SP++D F++ 
Sbjct: 133 ----------IGCFGLTEPNHGSDPGGMVTRAKKVPGGYSVSGAKMWITNSPIADVFVVW 182

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A++E   G   +   + +    GL    +  K+G R++ T E+     F     + N+  
Sbjct: 183 AKLE-ENGKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEVFVP---EENLLP 238

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIAD 361
                      L+SA   ++   +  AE+  +  R     R   G  L    ++++ +AD
Sbjct: 239 NVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLAD 298

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I        RL    DE  +       A  +  I K   C  +  +   A + +GG
Sbjct: 299 MQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIARLARDMLGG 351

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 352 NGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|146092445|ref|XP_001470295.1| acyl-coa dehydrogenase [Leishmania infantum]
 gi|134085089|emb|CAM69490.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5]
          Length = 629

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 88/475 (18%), Positives = 165/475 (34%), Gaps = 61/475 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +     G         +       +       +   A          S+
Sbjct: 101 VTTPNGFKEAYQALTAGGWTGINEAEKYGGQALPLSVGFTTREMIATANWGFSMYSGLSL 160

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +  +   + PK+ S E+  T             + LTE + GTD++ + +
Sbjct: 161 GACRTLMSWASDELKDQYLPKLVSGEWSGT-------------MCLTEPQCGTDLSQVKT 207

Query: 217 QGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE- 263
           + +   DG  Y ++G K F+S+   D       ++LA++         +  FLVPR +  
Sbjct: 208 KAEPSGDGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSLPSTKGLSLFLVPRHVVN 267

Query: 264 -DGSPNG---LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            DGS  G   +    L+ K+G + ++T +L F N+ G+L+G+ +     +        + 
Sbjct: 268 DDGSLEGAKNVECIALEKKMGIKGSSTCQLSFHNSVGYLIGEPSAGMKQMFTFMNAARVG 327

Query: 320 SAIMSVSGMRVSLAEAIHYARRRH---VSGG---------ILIDQPVMKRAIADIALDIA 367
            A+  V    ++    + YAR R      GG          +I    +++ +        
Sbjct: 328 CALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRIICHANVRQNVLFAKAIAE 387

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL   +    D   +  + A             PI K    +      +  ++  GG
Sbjct: 388 GGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKACVTEWGVEAASRLLQVWGG 447

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL---FSTLEQD 475
            GYI+   + +  R+S   +I  G+     LD +    L  KG N  ++     S L + 
Sbjct: 448 HGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTKGGNQAKRFGKRVSKLARA 507

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
              S   +    R    + K+     R  T +I L    A   R      ++ FL
Sbjct: 508 HMLSTGALGRYGRQLWLMQKQW----RIATTRIGLM---ALKNRDAAAASSEDFL 555


>gi|291006219|ref|ZP_06564192.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 388

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 132/387 (34%), Gaps = 36/387 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L  +    ER D+V   P     +  R++  GL+ +                    R  
Sbjct: 25  ELDPHEDEVERLDEV--PPGLAERIRDRALAAGLYAANMPEELGGGGLDAVGMALVERE- 81

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                    L         +VA  +               E       P  +      L 
Sbjct: 82  ---------LGRAGYALQMLVARPSNILQA-------CEGEQRERYLLPAIRGERHDCLA 125

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQV----EGRVGCF 256
           +TE   G+D+ ++T++  +  D  Y L+G K F+S   +  F++  A        R    
Sbjct: 126 MTEPGAGSDVRSMTTRAVRDGDD-YVLNGTKHFISHADAADFVILFAATGTERTPRGEKN 184

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           L+   L D    GL  +R  + + +R     EL F +     G  LG+       +    
Sbjct: 185 LITAFLVDLDTPGLTVRRGSSCVSHRGYHQCELSFEDCRIPAGQRLGEEGRGFELMGQWL 244

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  SV   R  L  A  +A +R   G  +     +   +AD+A ++ AA  L+
Sbjct: 245 GASRLSVAATSVGRGRRVLELATEWAAQREQFGQPIGRFQGVGFQLADMATELDAAELLT 304

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A   D+        A     A + K +  +    +   A++  GG G + E  + R 
Sbjct: 305 LRAAWKLDQ-------DAMTDQDAAMAKLFASEALGRITDRAVQIFGGMGLMAELPVERF 357

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R++    I  G+       +   + +
Sbjct: 358 WRDARVERIWDGTSEIQRHIISRSMLR 384


>gi|241666659|ref|YP_002984743.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240862116|gb|ACS59781.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 126/358 (35%), Gaps = 29/358 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  EIFREMGELGLLGPTISPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIE 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSEAQKLKYLPKLATGEW-------------IGCFGLTEPDHGSDPGSMATRAKKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+     F     LL D+    GP   +        A  ++       A A  Y  
Sbjct: 218 SITGEVVMDGVFVPEENLLPDVTGLKGPFTCL-NSARFGIAWGALGAAEDCYARARQYTL 276

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+A +I+       RL    +E     E       +  I 
Sbjct: 277 ERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSIL 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 330 KRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAI 387


>gi|254246209|ref|ZP_04939530.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124870985|gb|EAY62701.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 395

 Score =  230 bits (586), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 151/433 (34%), Gaps = 53/433 (12%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            D LL          + ++L    E ++   AQ  AR  +   P++       ER D   
Sbjct: 9   DDPLL----------LDQQLTEE-ERMVRDAAQAYAR--DKLAPRVTEAFRH-ERTDAAI 54

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
           F        R     GL        +             AR           +MS  S  
Sbjct: 55  F--------REMGEVGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSL 106

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ + E+                 GLTE   G+D  ++ ++
Sbjct: 107 VMVPIFEFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTR 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A+++   G   +   + +    GL    +  
Sbjct: 154 AKKVPGGYALSGAKMWITNSPIADVFVVWAKLQ-ENGKDAIRGFILEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G R++ T E+     F     + N+             L+SA   ++   +  AE+  
Sbjct: 213 KVGLRASITGEIVLDEVFVP---EENLMPNVSGLRGPFTCLNSARYGIAWGALGAAESCW 269

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +  R     R   G  L    ++++ +AD+  +I        RL    DE  +       
Sbjct: 270 HTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA------- 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L
Sbjct: 323 AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL 382

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 383 -ILGRAQTGIQAF 394


>gi|121607229|ref|YP_995036.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121551869|gb|ABM56018.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 76/422 (18%), Positives = 151/422 (35%), Gaps = 48/422 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
           +L  L A              E +L  + Q+LAR      P+   +   GE        P
Sbjct: 3   ILQRLDARLALSDE-------ERMLLASVQQLAR--EQVAPRAGHFDRSGE-------FP 46

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           +    LR     GL+      ++          +   R    A    G + + +  +   
Sbjct: 47  S--ENLRAINALGLNAMFIPAAYGGAELSYTAYLACVREISQACAATGIIWATNYHAIKP 104

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +        P+I                     L +TE   G+D   + +  + +
Sbjct: 105 LIDWGSEEQKTRLLPRIADG--------------ALAALAITEPDAGSDATGMRTSFRPV 150

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIG 280
            D +    G  +  +   +  +++  + EG  G    +  L+ +    GL   RL++K+G
Sbjct: 151 GDDVLVNGGKSFITNGDRAGLYLLFGKWEGIAGARQSISVLILEQGTPGLSVLRLEDKMG 210

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDSAIMSVSGMRVSLAE 334
            R++ T  L F           NV   P + +KIL           A  ++   R +  +
Sbjct: 211 MRASGTATLAFDGCRVP---QANVLGQPGDGLKILFASLNKSRPSVAAHALGIARAAFED 267

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ Y  +R  SG  +++   ++  +AD+A ++A   +  +++A   D        A    
Sbjct: 268 AVAYINQRRQSGQRILEFQGIQFMVADLAAELALVESWLWQVAGWVDAG------AQDFG 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A + K     +A  V  +A++ +GG GY ++  + R  R++    I  G+       +
Sbjct: 322 MEASLLKLRATDLAMRVATDAVQLLGGYGYCKDYRVERLMRDAKITQIWEGTNQIHRQLI 381

Query: 455 LN 456
             
Sbjct: 382 GR 383


>gi|161338484|emb|CAO03071.1| MasA protein [Azoarcus sp. HxN1]
          Length = 379

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 120/360 (33%), Gaps = 27/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASM 161
             + +++  +G     W          +  +        +A++    LM     S     
Sbjct: 40  REVWKKAGDNGFL-LPWADECYGGSGAKDFRYDQIVCEELARVNESGLMLHLHNSLVGPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    + W P   S                 + + +TE   G+D+A + +   + 
Sbjct: 99  IEHFGTAEQKERWLPPCVSG-------------DSILAIAMTEPGAGSDLAGMKTTAVEK 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D    L+G K F+S+ +    +++A          +   + +    G    R   K+G 
Sbjct: 146 EDHF-LLNGSKTFISNGLLSDLVIVAAKTASDTRHAIGLFMLERGMEGFERGRKLEKLGM 204

Query: 282 RSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           RS  T EL F+N        L         +  M +   +  A  +V+    +L     Y
Sbjct: 205 RSQDTAELFFNNVKVPKTNLLGEKTKGFHILMQMLVHERVTLACSAVALSSAALKMTKEY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R+  G  +      +  +A++  +I  A     +     D        A+     A 
Sbjct: 265 VEQRNAFGSQVSKFQNTRFKLAEMKTEIDIAQVFVDKCV--MDLNNRELSAAS-----AC 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C ++   V  + ++  GG GY+ E  I + Y  +    I  G+   M   +   +
Sbjct: 318 EAKLFCSELLTRVADQCVQLHGGYGYMWEYPITQLYATARIYPIFAGTSEMMKEVIAKAM 377


>gi|328544490|ref|YP_004304599.1| acyl-CoA dehydrogenase [polymorphum gilvum SL003B-26A1]
 gi|326414232|gb|ADZ71295.1| Acyl-CoA dehydrogenase [Polymorphum gilvum SL003B-26A1]
          Length = 565

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 91/480 (18%), Positives = 165/480 (34%), Gaps = 50/480 (10%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD--KVEFHPAWHALLRRSIHDGLHC 117
           L +   +    E AR+A      L+A     G R +  +V     +    R+    G   
Sbjct: 31  LDDDTAAAILGEAARIAEGVVAPLNARADRVGCRIEAGRVRTPEGYADAYRQLGEGGWLA 90

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                +          +     L+  A +        +  +  ++  +       +W P+
Sbjct: 91  MDAPEAHGGQGLPVTLQAACQPLFERACIAFMMAAGSAHAAVQLLHEVADADTAAEWIPR 150

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + + E+             A  + ++E   G+D+  I ++  +  DG     G K ++S 
Sbjct: 151 LATGEW-------------AATICISEPDAGSDVGRIRTRAARAGDGWTVT-GEKIWISF 196

Query: 238 PMSDA-----FIMLAQVEGRVGCFLVPRLLE-----DGSPNGLCYQRLKNKIGNRSNATV 287
              D        +LA+     G   +   L      DGS N +  QR++ K+G   + T 
Sbjct: 197 GDHDMTPRIGHCLLARTGDAPGTRGLSLFLVPNTRVDGSANAITVQRIEEKLGLHGSPTC 256

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
            L F      LLG        +  M  ++ L +A   +     +   A  YA  R   G 
Sbjct: 257 ALAFEGAEAVLLGAEGRGLPQLFAMIEMMRLSTACQGLGVASGACDTARAYAAERRQGGD 316

Query: 348 ------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARI 395
                  ++    ++R I D+             LA + D A+   +       AA+A  
Sbjct: 317 PAAPAVPILAHADVRRQILDMEARTEVLRLAILELATAMDLARCEPDPAVAADHAAFAAW 376

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M P+ K +  +    V + A++ +GG+GY  E  + +  R++   SI  G+     LD L
Sbjct: 377 MLPLAKNFGGETGFDVASRAIQVLGGAGYTREWPVEQALRDTRIVSIYEGTTGMQALDFL 436

Query: 456 NLLE-----KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510
                    +G  LF                +  T L D +   +      R  +E +AL
Sbjct: 437 TRRLWRDEGRGLALFLARAHAEIAAAQPQQAEAATALADLLGRFE------RLSSEMMAL 490


>gi|45656266|ref|YP_000352.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599500|gb|AAS68989.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 394

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 129/361 (35%), Gaps = 29/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVA 163
             R     GL           +    A         L A      L  ++  V   +   
Sbjct: 51  FRRIGSELGLFGVTVPEEDGGMGMD-AVAAVIIHEELSAYDPGFTLSYLAHEVLFVNNFY 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             +       +  K+ S E+               G+G+TE   GTD+  + +   K  D
Sbjct: 110 HSSNAAQRAKYLLKVISGEW-------------IGGMGMTEPGAGTDVLGMRTIAVKKGD 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  +  +   F++ A+++           + + S  G    + + K+G RS
Sbjct: 157 KYVLNGSKQYITNGNVGSVFLVYAKMDKD--SKRTTSFIVESSFPGFSVGKKEEKMGMRS 214

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYA- 339
           + T +L F +        +    G +  M     +  +  A  S+   +  +     Y  
Sbjct: 215 SPTTQLIFEDCEVPAENLVGQEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTI 274

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  L +   ++R +A+   D  AA AL +++A       S     +   + A  
Sbjct: 275 RHREAFGKKLSEFGQIQRLLAESYADYQAARALVYQVA-------SGIHPESRNSLGAAS 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    +MA  V   A++ +GG GY  E  + R +R+S   SI  G+  AM  +++  L+
Sbjct: 328 AKLVATQMAERVSRNAIQALGGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLK 387

Query: 460 K 460
           K
Sbjct: 388 K 388


>gi|86739900|ref|YP_480300.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86566762|gb|ABD10571.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 381

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 131/378 (34%), Gaps = 33/378 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +G         E H        ++   GL C      +       AH+    R       
Sbjct: 31  HGRW------TEQHAVDREFWNKAGEIGLLCISCPIEYGGGGGTFAHEAVVLREQGYIAD 84

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +    +  S   A  +         + W P++ S E+                + +TE  
Sbjct: 85  DCWAYLVHSPIVAHYINAYGNHEQKQRWLPRLASGEF-------------VGAIAMTEPG 131

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-ED 264
            G+D+ A+ +  ++  D  Y ++G K F+++    D  I++A+     G   +  ++ E 
Sbjct: 132 TGSDLQAVRTTARREGDH-YVINGAKTFITNGTHCDLLIIVARTGNAPGGRGLSLIVAET 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDS 320
               G    R+  KIG     T EL F++     +  L      G V+ ++ L    L  
Sbjct: 191 QGLPGFERGRVLQKIGAMGTDTRELAFTDMRVPAVNLLGPAEGQGFVQLVQQLPQERLSI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ + +    ++  AI YA+ R   G  L++    +  +A+   +  A            
Sbjct: 251 AVNAAAAAEHAVDLAIAYAKERTAFGKPLLEFQNTRFVLAECRTEALALRTF-------I 303

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   +           A + KY        ++   ++  GG GY+ E  IAR Y  +   
Sbjct: 304 DHCITEHVAGRLDGATASMAKYLATDKQCEIVDRCLQIFGGYGYMTEYPIARMYAAARVQ 363

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 364 RIYGGTNEIMKELIARSL 381


>gi|188592211|ref|YP_001796809.1| acyl-CoA deshydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|170938585|emb|CAP63572.1| putative acyl-CoA deshydrogenase [Cupriavidus taiwanensis LMG
           19424]
          Length = 385

 Score =  230 bits (586), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 127/378 (33%), Gaps = 33/378 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQL 146
           GP GERW +         + R++   G      D  +    V+   ++            
Sbjct: 26  GPHGERWREQGCVD--REVFRKAGEQGYLLMWADEQYGGAGVQDFRYEQILIEENARHGD 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S   A  +  +      +   P                +      + +TE +
Sbjct: 84  SGFFGTLHSRLVAPYIGRIGNEEQRQRLLP-------------AAARGESIFAVAMTEPQ 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A I ++ +   D         +  +  ++D  I++A+ +       +   + +  
Sbjct: 131 TGSDLAGIRTRAEDHGDHWVLNGAKTYISNGQLADVVIVVARTDPERSH-GLTLFIVERG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G    R   K+G  S  T EL F N         NV   P +  + L        L  
Sbjct: 190 MPGFERGRKLRKLGLHSQDTSELFFDNVRVP---KANVLGEPGQAFRYLTRHLAEERLIG 246

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   ++  +V+    + Y R R   G  +      +  +A++   + A      +     
Sbjct: 247 ACGYMASAQVAFDITLDYVRERKAFGRAIGTFQNSRFKLAELRAQLDALQTFVDQCVLQH 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +      E AA A+++         ++   ++ E ++  GG+GY+EE  I R Y ++  +
Sbjct: 307 NAGTLTVETAASAKLLT-------SELQGRMVDEGVQLHGGAGYMEEYRICRMYADARIS 359

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS   M   +   L
Sbjct: 360 RIYAGSSEIMKEIIGRGL 377


>gi|301346698|ref|ZP_07227439.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301510079|ref|ZP_07235316.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|193076509|gb|ABO11161.2| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 403

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 61  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 120

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 121 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 167

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 168 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 227

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 228 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 284

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 285 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 338 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 396

Query: 461 GTNLF 465
           G   F
Sbjct: 397 GIAAF 401


>gi|330967954|gb|EGH68214.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 393

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 132/379 (34%), Gaps = 43/379 (11%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
             +  PA    +      GL  +     F             AR           +MS  
Sbjct: 48  HEKTDPAIFREMG---EVGLLGATIPEEFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQ 104

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + PK+ S E+                 GLTE   G+D  A+
Sbjct: 105 SSLVMVPINEFGTRAQKEKYLPKLASGEW-------------IGCFGLTEPNHGSDPGAM 151

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ + +  G        W  +SP++D F++ A+ +       +   + +    GL    
Sbjct: 152 ITRARSVEGGYRLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWAGLSAPV 207

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+G R++ T E+   N F        D+    GP         L+SA   +S   + 
Sbjct: 208 IHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALG 261

Query: 332 LAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE   +  R     R   G  L    ++++ +AD+  +I  A     RL    DE  + 
Sbjct: 262 AAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  +  I K   C  +  +   A + +GG+G  +E  IARH       +   G+
Sbjct: 321 ------AVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGT 374

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 375 HDVHAL-ILGRAQTGIQAF 392


>gi|313675289|ref|YP_004053285.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
 gi|312941987|gb|ADR21177.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 395

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 81/437 (18%), Positives = 156/437 (35%), Gaps = 55/437 (12%)

Query: 26  NQPPL-FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84
           NQ    F   + Y     L  L+     ++ + +    +  +S   +E A+ A++    +
Sbjct: 3   NQSTDQFESPDFY----ALDGLLTEEHKLIRQSVRDFVKKEISPNIEEWAQNAHFPYEIV 58

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             +G  G       F P    + +     GL    +    + + R  +     A      
Sbjct: 59  KKFGDVGA------FGP---TIPQEYGGGGLDYISYGLIMQEIERGDSGMRSTA------ 103

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            ++   +M P       +         K + PK+ S E+                 GLTE
Sbjct: 104 SVQGSLVMYP-------IYAFGNEAQRKKYLPKLASGEW-------------LGSFGLTE 143

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLE 263
              G++ + +T+  +   D         W  +SP  D  ++ A+  EGR+   +V R +E
Sbjct: 144 PDHGSNPSGMTTNFKDKGDHYLLNGAKMWISNSPKCDVAVVWAKNEEGRIHGLIVERGME 203

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSA 321
                G        K   R++ T EL F N        L   +G    MK L       A
Sbjct: 204 -----GFTTPETHGKWSLRASTTGELVFDNVKVPKENLLEGKSGLGAPMKCLDSARFGIA 258

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++         A  Y+  R   G  +    + ++ ++++  +I  +  L++RLA   D
Sbjct: 259 WGAIGAAMDCYDSARRYSLERIQFGKPIASFQLTQKKLSEMLTEITKSQLLNYRLAQLMD 318

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E K+ + + + A+  A        ++A  +  EA +  GG G   +  + RH     +  
Sbjct: 319 EGKASTPQISMAKRNAV-------EIALNIAREARQIHGGMGITGDYPMMRHMANLESVV 371

Query: 442 ILLGSGNAMVLDVLNLL 458
              G+ +  +L +   +
Sbjct: 372 TYEGTHDIHLLILGKEI 388


>gi|108763787|ref|YP_629060.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622]
 gi|108467667|gb|ABF92852.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622]
          Length = 602

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 92/507 (18%), Positives = 179/507 (35%), Gaps = 58/507 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            + +  AR   Y T +     P   R  +V  HP    L  R +  GL  +         
Sbjct: 48  DSTRRFAREVLYPTYRDMDAQPPSFRDGRVHVHPLMRELYPRLVELGLLTATRPPDVGGQ 107

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                    +    + A L     +  ++ +A ++ +  TP V   +   ++  E+  T 
Sbjct: 108 QLPLTVHAVSTAYLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRGEWTGT- 166

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----A 242
                       + LTE + G+ +A + ++     DG + + G K F+S    D      
Sbjct: 167 ------------MALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDFNENVV 214

Query: 243 FIMLAQVEG------RVGCFLVPRLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFS- 292
            + LA++EG       +  F VP    +G     N +    + +KIG +   ++ L +  
Sbjct: 215 HLTLARIEGAEGGTRGISLFAVPSRRPEGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGE 274

Query: 293 --NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--- 347
             +  G+L+G        +  M     +   +  V+   V+  EA+ YAR R        
Sbjct: 275 SGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAVAYARERPQGRPTGV 334

Query: 348 --------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YA 393
                    +I+   ++R +      +    +L    +   D A    +EA         
Sbjct: 335 RDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQRAGLLV 394

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++ P+ K +  +      A A++  GG GY  E       R+   NSI  G+     LD
Sbjct: 395 DLLTPVAKSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLD 454

Query: 454 VLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVIT-----ILRDSISLCKE--DKGLARFL 504
           +L   ++  G    +     +   +  +    +T      L  +++       +  AR +
Sbjct: 455 LLGRKVVAGGGAALQSFAEEVGTTVARARAAGVTPEWGEALEQALAETTTVVTELGARGM 514

Query: 505 TEKIALAS--SAAALYRAGMNDIADVF 529
           + ++ L    SA  L    +  +A  +
Sbjct: 515 SGEVELMLRHSADFLELFSVLAVAWRW 541


>gi|260904523|ref|ZP_05912845.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 378

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 155/401 (38%), Gaps = 43/401 (10%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             Q+LAR    +   L    P     D VE   P W   +++    G    +    +  +
Sbjct: 7   EIQQLAREFARDV-VL----PLANELDPVEGQFPEWF--IKQMADMGFFGILIPEEYGGL 59

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                     A     A +  G L++             +P       PK+ + EY    
Sbjct: 60  GLGVFEYCLVAEELSRAWMSVGGLLARGNGMGGGF----SPEQEARLLPKVATGEY---- 111

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIML 246
                         L+E   G+D+A I  +  +  DG + ++G K + + +  +D  I+ 
Sbjct: 112 ---------LGAFALSEAEAGSDVANIRCKATRADDGGWVINGTKMWCTFADQADYIILF 162

Query: 247 AQV--EGRVGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
           A+   +       +   L + +    P G+    +K KIG     T +L F +       
Sbjct: 163 ARTSTDEEKRHRGISAFLVEKNRGEFPEGMSGTAVK-KIGYFGWKTWDLNFDDFHLPADA 221

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG+             +    +A  S+   + +L ++I Y ++R   G  L D   ++ 
Sbjct: 222 LLGEEERGFYQAVSGLEVGRAHTAARSIGLAQAALEDSIAYLKQRVQFGHPLADFQHLRF 281

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A  I A+ AL + +    D      +EAA  + +A        +MA  V +EA++
Sbjct: 282 KVADMAAQIEASRALMYHVCTQIDSGARCDKEAAMVKYLAA-------EMAEKVTSEAVQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+GY ++ ++ RH+R++    I  GS    +  + + L
Sbjct: 335 IHGGAGYTKDFAVERHWRDARLTKIFEGSSEIQMRIISDEL 375


>gi|311108314|ref|YP_003981167.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763003|gb|ADP18452.1| acyl-CoA dehydrogenase, N-terminal domain protein 19 [Achromobacter
           xylosoxidans A8]
          Length = 387

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 144/382 (37%), Gaps = 33/382 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYLMA 144
             P  + W+  E  PA   L R+    G        ++  +    ++ + A  A  Y  A
Sbjct: 22  IDPYVDEWEAAEIFPA-RELFRKMGPLGYLGITKPEAYGGLGLDFSYAMAASEAMGYARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q  A  +   +  +   +A   +  + +++              AP         +G++E
Sbjct: 81  QGVAMGIGVQTNMATPALAAFGSDALRQEFL-------------APAIAGEAVASIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVP 259
           +  G+D+A++ ++ ++  D         W  +   +D   +L               +VP
Sbjct: 128 QGAGSDVASLKTRARRDGDDYVISGSKMWITNGTQADWICLLCNTSEGNPHKNKSLIVVP 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+  Q++  K+G  S+ T ++        +   +     G +  MK     
Sbjct: 188 LRENGKRVRGVEVQKI-RKLGMWSSDTAQIFLDEVRVPVRNRIGEEGMGFIYQMKQFQEE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD A   ++ + + + E + Y R+R   G  L+D   ++  +A++  ++ A   L +  
Sbjct: 247 RLDGAARRLAAI-MWIQETVDYLRQRQAFGRPLLDNQYIQFKLAELKTELEALRGLIYLA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++ E     E       +A + K    +++  +    M+  GG GY  +  ++R YR+
Sbjct: 306 TQTYIEGGDVVE-------LASMAKLKAGRLSREITDWCMQFQGGMGYTWDNPVSRAYRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M++ +   +
Sbjct: 359 YRLCSIGGGADEVMLMVIARHM 380


>gi|332875821|ref|ZP_08443616.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|332736001|gb|EGJ67033.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 406

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|239983511|ref|ZP_04706035.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291455331|ref|ZP_06594721.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291358280|gb|EFE85182.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 380

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 133/390 (34%), Gaps = 39/390 (10%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHK 134
           +A    P    +   G     +    AW A    +   GL     D  +         + 
Sbjct: 21  LAKEVLPHYEQWERDG-----ITSRAAWLA----AGRQGLLGLAVDEEYGGGGNPDFRYS 71

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A +    +   +      +  + T    + W P   S E            
Sbjct: 72  AVLGEEFARAGVSGLAVGLHNDIVGPYLTGLATEEQKRRWLPGFCSGE------------ 119

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
                + +TE   G+D+  I +  +   D    L+G K F+S+ + +D  ++ A+     
Sbjct: 120 -TITAIAMTEPGAGSDLQGIRTTAEDKGDHF-LLNGAKTFISNGILADLVVVAAKTTPEG 177

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G   +  L+ +    G    R  +KIG +S  T EL F +        L    G    + 
Sbjct: 178 GAHGLSLLVVERGAEGFERGRNLDKIGQKSQDTAELFFHDVRVPKENLLGERDGAFLHL- 236

Query: 314 ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +  L    M+++   ++ AE +      Y + R   G  L     ++  IA++A + A 
Sbjct: 237 -MTNLAQERMAIAVAAITAAEHLVEITSTYVKEREAFGRPLSRLQHIRFEIAEMATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A         D   +   E     + A + K+W  ++        ++  GG GY+ E 
Sbjct: 296 TRAF-------LDRCIADHAEGKLDAVHASMAKWWATELQKRTADRCLQLHGGYGYMNEY 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + +    +I  G+   M   +   L
Sbjct: 349 PVAKAFTDGRIQTIYGGTTEIMKEIIGRSL 378


>gi|114656355|ref|XP_001142715.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 3 [Pan
           troglodytes]
          Length = 484

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 27/354 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + DE    +++             +  + A  V  + ++C G   +  +    R
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFG-QTFSAQHPPGR 391


>gi|190895532|ref|YP_001985824.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
 gi|190699477|gb|ACE93561.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 395

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 129/360 (35%), Gaps = 33/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A+ R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  AIFREMGELGLLGPTISPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPID 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSEAQKLKYLPKLAAGEW-------------IGCFGLTEPDHGSDPGSMATRARKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+     F     + N+  G          L+SA   ++   +  AE     A  Y
Sbjct: 218 SITGEVVMDGVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+A +I+       RL    +E     E       +  
Sbjct: 275 TLERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 328 ILKRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAI 387


>gi|167580782|ref|ZP_02373656.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH]
 gi|167618886|ref|ZP_02387517.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis Bt4]
          Length = 395

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 132/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL       ++             AR           +MS  S      + 
Sbjct: 53  AIFREMGEVGLLGPTIPEAYGGPGLSYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRAKKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYALSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGWKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEVFVP---EENILPNVKGLRGPFTCLNSARYGIAWGALGAAESCWHTARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|115525226|ref|YP_782137.1| butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
 gi|115519173|gb|ABJ07157.1| Butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
          Length = 378

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 126/376 (33%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    L       G     +                A        +  
Sbjct: 26  PNAAAIDEAHAFP--RQLFGELGALGFFAMRYPAGVGGSEVDLVSLCIALEEIARGSMSL 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                     A+M +LM T      +   +   +       P         + +TE   G
Sbjct: 84  AG-------CATMQSLMGT-----KFLEMLGGDDIRERLLIPALHGEKVGAICMTEPDAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   K+  G        W  S+P++D F + A+        +    L +    
Sbjct: 132 SDLGGIATTATKVDGGYRLKGQKIWVTSAPVADFFTVFARAGEARKLTI---FLVERHFE 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED----MKILIYLDSAIMS 324
           GL   +   K+G  +  T EL   + F      L+   G  E     +   + + +  ++
Sbjct: 189 GLIVGKAIPKMGVWALPTSELALDDCFVPDSHMLSREVGDGEAHLRKLLAEVRIVTGALA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G R +L EAI YA  R   G  +     ++  +A++A D+ AA  L    A   D  K
Sbjct: 249 LGGARGALDEAIRYAAERKQFGKPINAYQAVQIKLAEMATDLEAARRLVHYAAWLKDSGK 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EAA A       K +  + A  +  +A   +   GY  E  + RH R+     I  
Sbjct: 309 PHHREAAMA-------KLFASEAAAQICDKAARILASYGYSMEFPVQRHLRDIRFTLIGG 361

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ + + L +   L +
Sbjct: 362 GTSDILKLIIAKELSR 377


>gi|312958586|ref|ZP_07773106.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
 gi|311287129|gb|EFQ65690.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6]
          Length = 600

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 90/490 (18%), Positives = 170/490 (34%), Gaps = 60/490 (12%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A   +      ++ +A+
Sbjct: 76  PEVKPAVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    T    + +   +    +  T             + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGTEEQKQRFLQPMIDGRFFGT-------------MALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y L G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G+ N +    L +K+G R   +  L F    N  G+L+G  +     +  M     +   
Sbjct: 243 GARNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGKPHQGLSCMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R                 +I    +KR +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRLPDSKDPATAPVSIIQHADIKRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+  +      R +      ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDTTTLDTETERKQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK- 481
             E  + ++YR++  N I  G+     LD+L   L + G    +QL   + +    + K 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIAETAARAQKY 482

Query: 482 KVITILRDSI-SLCKEDKGLARFLTEKIA-------LASSAAALYRAGMNDIADVFLENR 533
             +T LR  +  L    + +   L   +A       LA+SA  L   G   I   +LE  
Sbjct: 483 PSLTALRTPLEQLVARLQDVTLGLLTDLAQGQVNSSLANSALYLKVFGHTVIGWRWLEQA 542

Query: 534 FLDNCHSTHC 543
                     
Sbjct: 543 IHAEEGLALG 552


>gi|229491809|ref|ZP_04385630.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229321490|gb|EEN87290.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 385

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 135/367 (36%), Gaps = 35/367 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  +    G         F       + K +A      A+               +  
Sbjct: 40  RELFNQLAELGATSFDIPEEFGG-AGPTSFKFQAVIQEETARAAVSFGHYGVSIGIVLPY 98

Query: 164 LM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L+        + W P + S E               + + +TE   G+D+A I +  +  
Sbjct: 99  LLRLADDEQKQRWLPGVASGE-------------TMLCIAMTEPGTGSDLAGIKTTARLS 145

Query: 222 SDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++   +    ++A            F +  L+      G  + R  
Sbjct: 146 EDGTHYILNGAKTFITGARNSELCVVAARTSAPSEEDRRFGLSLLVVPTDSVGFNFGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS----- 331
           +KIG +S+ T EL F++    +   L         +     L    +S+   + +     
Sbjct: 206 DKIGMKSSDTNELSFTDVRVPVENLLGEQDKGFSYL--GQNLPRERLSIGVGQTACAAAA 263

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  A  Y R+R V G  +      K  +A+ A ++AAA AL+ +  +  D  +  + +AA
Sbjct: 264 IEFASEYVRQRQVFGKPVASFQNTKFVLAECATEVAAAQALADKGLDLDDSGELTAADAA 323

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +C +MA  VI + ++  GG GYI E  IAR Y ++  + I  G+   M 
Sbjct: 324 R-------IKLFCTEMAGRVIDKCLQLHGGYGYILEYPIARLYADTRVSRIYGGTSEVMK 376

Query: 452 LDVLNLL 458
             +   +
Sbjct: 377 TIIAKDI 383


>gi|158316306|ref|YP_001508814.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111711|gb|ABW13908.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 398

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 125/386 (32%), Gaps = 38/386 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ER D  E+  A    ++     GL        +  +                  +    +
Sbjct: 37  ERKD--EYPEAIVEAMK---EMGLFGITIPEQYGGLGESLLTYALVVEEIARGWMSVSGV 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++     A +V    T    +   P++ +              ++     ++E   G+D+
Sbjct: 92  INTHFIVAYLVLQHGTDEQRERLLPRMATG-------------ALRGAFSMSEPGCGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLED 264
           +AIT++  +  D         W  +   +     L + +            FL+ +    
Sbjct: 139 SAITTRAGRDGDEYTITGQKMWLTNGARAGLVATLVKTDEGAESVYRNMTTFLLEKEPGF 198

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
           G+  G+       K+G +   T E+            L    G       ++       +
Sbjct: 199 GTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPGGAGRGFYQMMDGVEVGRV 258

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A  +   M  +   AI YA++R   G  + D   +   +AD+A  + A   +    A 
Sbjct: 259 NVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAAR 318

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +    EA  A+ +A        +    V  E+    GG GY +E  I R YRE+P
Sbjct: 319 KKDSGQRNDVEAGMAKYLA-------SEYCHEVTTESFRIHGGYGYSKEYEIERLYREAP 371

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
              I  G+       +   L K   L
Sbjct: 372 FMLIGEGTSEVQKRIISRALLKEYRL 397


>gi|70733998|ref|YP_257638.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
 gi|68348297|gb|AAY95903.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens
           Pf-5]
          Length = 600

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 87/499 (17%), Positives = 172/499 (34%), Gaps = 66/499 (13%)

Query: 86  AYGPGGERWD------KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
            +   G+  +      +    P     +   +  G   +        +            
Sbjct: 55  PHNRKGDEHEPRYEDGQAVLIPEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFA 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +  A   +      ++ +A+++    T    + +   +    +  T             
Sbjct: 115 HFQAANAASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG--- 251
           + LTE   G+ ++ I ++ +  +DG Y L G+K F+S            ++LA++     
Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPP 221

Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300
               +  F+VP+ L +     G  N +    L +K+G R   +  L F +     G+L+G
Sbjct: 222 GVKGISLFIVPKFLVNDDGSLGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVG 281

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------L 349
             +     +  M     +   + +V         ++ YAR R                 +
Sbjct: 282 KPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARERPQGRLPDSKDPSTAPVAI 341

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYW 403
           I    ++R +      +  A  L    A  FD+      A  R +      ++ PI K W
Sbjct: 342 IQHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTTTLADAAERQQAHELLDLLTPIVKSW 401

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461
             +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L   L + G
Sbjct: 402 PSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNG 461

Query: 462 TNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLTEKIA-------LAS 512
               + L   + +    +   + +  LR  +  L    + +   L   +A       LA+
Sbjct: 462 GAGLKHLVRLIAETGERARAHQSLDALRLPLEQLVTRLQNVTLGLLGDLASGKVTGTLAN 521

Query: 513 SAAALYRAGMNDIADVFLE 531
           SA  L   G   I   +LE
Sbjct: 522 SALYLKAFGHAVIGWRWLE 540


>gi|85375125|ref|YP_459187.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788208|gb|ABC64390.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 394

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 71/350 (20%), Positives = 136/350 (38%), Gaps = 18/350 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R++   G+    +          +          + ++ E     +  + ++ +  
Sbjct: 50  RELHRKAAEAGIIGVGYPEHLGGSGTLEEKGWDPFHSLVQSE-EMCRPGAGGIPASLLTH 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P +       + S E        +      I LG+TE  GG+D+A + ++ ++  D
Sbjct: 109 GIGLPPIVA-----MGSDELQQRIAPQVLSGEKIICLGITEPGGGSDVAQLKTKAERRGD 163

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             Y ++G K  ++S M   FI LA   G  G   +  LL +    G+    L  K+G  S
Sbjct: 164 H-YVVNGAKTLITSGMRADFITLAVRTGGDGMGGISLLLVETDRPGVSRTPL-QKMGWHS 221

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  +   +       L+G+ N   G +        L  A  + +  R+   +A+ +AR
Sbjct: 222 SDTATIHLDDVEVPAENLIGEENHGFGGIMRNFNGERLGMAQQAAAYARLCYEDALDWAR 281

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L+ +  ++  +A +   I A  A+    A +  E  +   + A  ++ A  T
Sbjct: 282 ERETFGRPLVTRQAIRHKLARMLQMINATQAMIDHAAWTVKEDCAFPGDFALLKVQATQT 341

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             +C         EA + +GG+ ++    + R YRE    +I  GS   M
Sbjct: 342 MEYC-------AREACQIMGGASFVRGNRVERIYREVRVMAIGGGSEEIM 384


>gi|154339806|ref|XP_001565860.1| isovaleryl-coA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063178|emb|CAM45378.1| putative isovaleryl-coA dehydrogenase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 410

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 143/351 (40%), Gaps = 45/351 (12%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV------ALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L            A  +          +P     W PK+ 
Sbjct: 88  PEADGGAGMDAVAAVIVHHELSKYDPGFCLAYLAHAMLFVNNFYYSASPAQRARWLPKVL 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  + +  +K S G Y L+G K ++++  
Sbjct: 148 TGEH-------------VGAMGMSEPGAGTDVLGMQTTAKKDSFGNYVLNGSKIWITNGT 194

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D +++ A+V G+     +   + +    G       +K G R++   +L F +     
Sbjct: 195 VADVYLIYAKVNGK-----ITAFVVERGMKGFTQGPKIDKCGMRASHMCQLFFEDVVVPA 249

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
               N+  G  + M  ++  L+   ++++GM V +AE        YA +R   G  + + 
Sbjct: 250 ---ENLLGGDGKGMVGMMRNLELERVTLAGMAVGIAERSVELMTSYASQRKAFGHPISNF 306

Query: 353 PVMKRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
             ++R IA+   D  AA AL + ++++   D       +AA         K +   +A  
Sbjct: 307 GQIQRYIAEGYADTEAAKALVYSVSHNVHPDNQNRLGSDAA---------KLFATPIAKK 357

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           V   A++ +GG GY ++  + R +R++    I  G+  A   ++   L KG
Sbjct: 358 VADSAIQVMGGMGYTQDMPVERLWRDAKLLEIGGGTIEAHHKNIAKDLLKG 408


>gi|157111111|ref|XP_001651395.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108878541|gb|EAT42766.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 402

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 132/369 (35%), Gaps = 32/369 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    PA    + +    GL            V  +        L L   +E 
Sbjct: 44  PIAAELDRDGCFPA--KQIAQLADLGL--------MRVTVSPEYGGSNLGMLALSLVVEE 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S  +   +       +                               L+E   G
Sbjct: 94  ISRGCASTGAILSIHNCLYANLLNR-----LGTVQQKEYFFSKYSADTIGAFALSESDAG 148

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           +D+AA++++ ++            W  S+  + + I+ A ++  +    +   L D  + 
Sbjct: 149 SDVAALSTKAKQDGGDWILNGSKAWVTSAKEAKSGIVFATIDPELKYKGITAFLIDFENL 208

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
           +GL   R ++K+G R+++T  L F+N     +   NV        ++ +  LD A + ++
Sbjct: 209 DGLKIGRNEDKLGIRASSTCGLHFNNVR---IPGSNVLGKVGGGFRVAMEQLDRARIGIA 265

Query: 327 GMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              + +++A       YA +R   G  L     ++  IA++A+ I  A  L  + A   D
Sbjct: 266 SQALGISQAALETASQYAEQRIAFGQPLSKLHSVQTRIAEMAVRIETARLLIRKAATEVD 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  ++  + A+ +A  T  +             + +GG GY+++    R+YR++    
Sbjct: 326 RGQQATKAISMAKWVAGETATFA-------AHNCQQIMGGMGYVKDMPAERYYRDARITE 378

Query: 442 ILLGSGNAM 450
           I  G  +  
Sbjct: 379 IYGGVTDVQ 387


>gi|169797090|ref|YP_001714883.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213156503|ref|YP_002318164.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|215484553|ref|YP_002326788.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
           AB307-0294]
 gi|260555617|ref|ZP_05827837.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|301594728|ref|ZP_07239736.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|332856328|ref|ZP_08436195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332867824|ref|ZP_08437862.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|169150017|emb|CAM87911.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213055663|gb|ACJ40565.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057]
 gi|213988121|gb|ACJ58420.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii
           AB307-0294]
 gi|260410528|gb|EEX03826.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|332727099|gb|EGJ58570.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332733724|gb|EGJ64879.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 406

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|86139222|ref|ZP_01057792.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824066|gb|EAQ44271.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 380

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 143/376 (38%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+    P    L ++    G+     D  +  +       +RAA    + +  A
Sbjct: 27  PYCDDWDEAGAVP--WELHQKIGEFGVWGFGIDEKYGGLGFDDCF-LRAAYSEELCRCGA 83

Query: 149 GHL---MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G +   ++    S   +A +    + +   P+I S                   LG+TE 
Sbjct: 84  GGVTAALAGRTISVEPIARLACDDIRERVLPEILSG-------------RKGSSLGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D+A + +  ++  +  + L+G K F++  M+  + ++    G  G   +     + 
Sbjct: 131 GGGSDVANLKTTARRDGNH-WVLNGSKTFITGGMTSDYFVIPARTGGQGLDGISLFFVEA 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G     L  K+G   +    L           ++GD       + +   +  ++   
Sbjct: 190 DTAGFSRSALTRKMGWWCSDQATLFLDEVRVPASNMMGDEGTGFLAIMNNFNMERINLIA 249

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  M+  L ++I +A+ R   G  LI   V++  IAD++  I A  A    +    ++
Sbjct: 250 GVLGMMKTCLEDSIAWAQERETFGKKLIRHQVIRHKIADMSARIDAVEATLRMICWQVNQ 309

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E + A+  A     +C        +EAM+ +GG+GY+    + R YRE    +I
Sbjct: 310 GDMPVAELSKAKFFATKACEFC-------ASEAMQILGGAGYLRGNRVERIYREVKVMAI 362

Query: 443 LLGSGNAMVLDVLNLL 458
             GS   M    +  +
Sbjct: 363 GGGSEEIMRDLAVRQM 378


>gi|331017847|gb|EGH97903.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 393

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 77/370 (20%), Positives = 131/370 (35%), Gaps = 40/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     F             AR           +MS  S      + 
Sbjct: 54  DIFREMGEVGLLGATIPEEFGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIN 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E+                 GLTE   G+D  A+ ++G+ +  
Sbjct: 114 EFGTQAQKEKYLPKLASGEW-------------IGCFGLTEPNHGSDPGAMITRGRSVEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 161 GYRLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWAGLSAPVIHGKVGLRA 216

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+   N F        D+    GP         L+SA   +S   +  AE   +  
Sbjct: 217 SITGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTA 270

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R   G  L    ++++ +AD+  +I  A     RL    DE  +       A  
Sbjct: 271 RQYTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGIA-------AVE 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +  I K   C  +  +   A + +GG+G  +E  IARH       +   G+ +   L +L
Sbjct: 324 ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-IL 382

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 383 GRAQTGIQAF 392


>gi|302867580|ref|YP_003836217.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570439|gb|ADL46641.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 380

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 79/361 (21%), Positives = 137/361 (37%), Gaps = 25/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +LR     GL    +        +     ++   +     L     +S    S   +A
Sbjct: 42  REVLRTLGRAGLLGLPYAEEHGGAAQPYEVYLQVLEILASRWLAVAEAVSVHTLSCYPLA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K   P +   E             +     L+E +GG+D AA+T++  +  D
Sbjct: 102 QFGTDEQRK-LLPDMIGGE-------------LLGAYCLSEPQGGSDAAALTTRAVRDGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   + ++D + +  +  G  G   +  LL D S  G+  Q  +  +G  +
Sbjct: 148 AYVVTGTKAWITHARVADFYNIFCRT-GGPGPKGISCLLADRSTAGIHPQAAERTMGLHA 206

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +   ++ F +       L+G                 L  A  +V   + +L  A+ YAR
Sbjct: 207 SPIAQIAFDDARVPAERLIGGEGAGFTIAMSALDSGRLGIAACAVGLAQGALDYAVGYAR 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +ID   +   +AD A  I+AA AL+   A   D  +  S EAA A       
Sbjct: 267 ERRQFGRAIIDFQGLGFNLADAATQISAARALTLAAARLRDAGRPYSIEAAKA------- 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +   +A  V  +A++ +GG+GY+ +  + R+ RE+    I+ G+     L +   L K
Sbjct: 320 KLFATDVAMRVTTDAVQVLGGAGYVADHPVERYMREAKVLQIVEGTNQIQRLVISRALAK 379

Query: 461 G 461
           G
Sbjct: 380 G 380


>gi|209546212|ref|YP_002278102.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539069|gb|ACI59002.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 395

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 129/360 (35%), Gaps = 33/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A+ R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  AIFREMGELGLLGPTISPDYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPID 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSEAQKLKYLPKLATGEW-------------IGCFGLTEPDHGSDPGSMATRAKKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+     F     + N+  G          L+SA   ++   +  AE     A  Y
Sbjct: 218 SITGEVVMDGVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+A +I+       RL    +E     E       +  
Sbjct: 275 TLERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 328 ILKRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAI 387


>gi|311104894|ref|YP_003977747.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759583|gb|ADP15032.1| acyl-CoA dehydrogenase, N-terminal domain protein 4 [Achromobacter
           xylosoxidans A8]
          Length = 384

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 126/355 (35%), Gaps = 23/355 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R     GL   +                               ++S S  +AS+++
Sbjct: 40  QEMVRAMRDFGLLGGMLQEKDGGYGLPMTTYGMLIAELARVWPSLRSIVSTSNLAASVLS 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +P + + + P++ S E                   L+E   G+D A + ++  + + 
Sbjct: 100 DGGSPYLKEKYLPRVLSGE-------------AIASFALSEPNIGSDAANVETRAVETAT 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        +     + +  ++  Q + + G   V  LL + +  G     + +K+G  S
Sbjct: 147 GWRVNGRKLYISLGTVCELGVVFVQTQRQSGERGVSCLLFERAMPGFSSSPI-HKMGMLS 205

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               EL F +       L+G         +    +     A  ++     +   A+ YA 
Sbjct: 206 CPLGELLFEDVEIPAANLIGTEGKGFALAKKYLNIGRCVVAFSALGIAEAAYEAAVKYAG 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  IAD+   +  +  L +R A++ D        AA ++++  + 
Sbjct: 266 DRVQFGRPIGGFQLVQHMIADMMTLVETSRLLCWRAADALDR------NAADSQMLCSMA 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           K         V   +M+  GG+GY     + RHYR++   SI  G+     L + 
Sbjct: 320 KRHATDAVLRVAELSMQVHGGAGYTTLFPVERHYRDARHLSIAEGTNQIQALLMA 374


>gi|167840722|ref|ZP_02467406.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 383

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 140/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H +  +    G+       +F       ++++      +MA+  
Sbjct: 23  NPHVDEWEEAGIFPA-HDVFGKLGALGMLGLSKPAAFGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +          AP         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLAPAIAGEQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  +         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTSARRDGNDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R+R + G  ++D  V+   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SI+R YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|150025774|ref|YP_001296600.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772315|emb|CAL43793.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 596

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 143/411 (34%), Gaps = 43/411 (10%)

Query: 78  NYNTPQLHAYGPGGERWD-KVEFHP--------AW-HALLRRSIHDGLHCSIWDRSFEPV 127
           ++N  QL       E  D ++  H         A+    ++++   G        ++  +
Sbjct: 25  DFNEEQLMMRDSVKEFVDKELWAHKDRFEKKDYAYTQECMKKAGDLGFLSVAVPEAYGGM 84

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPT 186
                + +        A               +M + L  T    + + PK+ S E+   
Sbjct: 85  GMGFVNTVLVCDHISGATGSFSTAFGAHTGIGTMPITLYGTEEQKQKYVPKLASGEWFG- 143

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFI 244
                          LTE   G+D  +  ++     DG          W  ++     FI
Sbjct: 144 ------------AYCLTEPGAGSDANSGKTKAVLSEDGKTYSITGQKMWISNAGFCSVFI 191

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-N 303
           + A++       +   ++E+   NG+     ++K+G R+++T ++ F++T       L  
Sbjct: 192 VFARIGDDK--NITGFIVENTPDNGISMNEEEHKLGIRASSTRQVFFNDTKVPAENMLSE 249

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    M  L    +  A   +   R  + +A++Y+  R      +     ++  +A+
Sbjct: 250 RGNGFKIAMNALNVGRIKLAAACLDAQRRVITQAVNYSNERIQFNTAISQFGAIRSKLAE 309

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------------PITKYWCCKMAP 409
           +A    A  + ++R A   ++  +  E A  +   A             I K    +   
Sbjct: 310 MATSCYAGESATYRAAKDIEDRITEREAAGSSHQEAELKGVEEYAIECSILKVAVSEDVQ 369

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A   E ++  GG G+ E+  +   +R++    I  G+     +  + +L K
Sbjct: 370 ACADEGIQIFGGMGFSEDTPMESAWRDARIARIYEGTNEINRMLSVGMLIK 420


>gi|225686253|ref|YP_002734225.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256262611|ref|ZP_05465143.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642358|gb|ACO02271.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263092398|gb|EEZ16651.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410609|gb|ADZ67673.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326553901|gb|ADZ88540.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 380

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 126/367 (34%), Gaps = 33/367 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEER 428
            GY+ + 
Sbjct: 339 YGYLADY 345


>gi|111019512|ref|YP_702484.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110819042|gb|ABG94326.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 397

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 127/363 (34%), Gaps = 34/363 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L +     G    +       +          A     A +    L++            
Sbjct: 53  LKKAMAEVGFFGIMIPEEHGGLGLGVFEYCLVAEELSRAWMSVSGLLARGNGMGGGF--- 109

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            TP       PK+   EY                  L+E   G+D+A I+ +  +  D  
Sbjct: 110 -TPEQEAALLPKVARGEY-------------LGAYALSEAEAGSDVANISCRATRDGDDW 155

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRV----GCFLVPRLLEDGSPNGLCYQ---RLKNK 278
                  W   +  +D  ++ A+ + +         +   L +    G           K
Sbjct: 156 VISGTKMWCTYADEADYLVLFARTDPKKDPAKPHRGISAFLIEKQRGGFPVGISGTKIRK 215

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG    +T EL F N       +LG+             +    +A  ++   R +L ++
Sbjct: 216 IGYFGWSTWELSFDNFRVPATAMLGEEGKGFYLAVSGLEVGRAHTAARAIGLARGALEDS 275

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  L D   ++  IA +A DI AA  L + +A   D  +  S EA+  ++
Sbjct: 276 IAYLHTRRQFGHELADFQHLRFKIAKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKL 335

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A        +MA  V +EA++  GG+GY  +  + RH+R++    I  G+    +  + 
Sbjct: 336 VA-------TEMAERVTSEAVQIHGGAGYTTDFQVERHWRDARLTKIFEGTSEIQMRIIS 388

Query: 456 NLL 458
           + L
Sbjct: 389 DEL 391


>gi|194292476|ref|YP_002008383.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226380|emb|CAQ72329.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 398

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 115/321 (35%), Gaps = 17/321 (5%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L+   ++   M       R    W  K    E        + +        L+E   
Sbjct: 59  EYCLICEQLSRGWMSVASIVARAQGGWIMKSMPEEMRREYLPRVVRGEFLNASALSEPDT 118

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLE 263
           G+D+A+I+ + +   D         W   +  +D  I+ A+             +   + 
Sbjct: 119 GSDLASISCRAELDGDEWVLTGNKYWCTFADGADYLIVFARTSAPPSPDKRWEGISCFMI 178

Query: 264 DGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           +    G           KIG     T EL           L+G    +   +        
Sbjct: 179 EKQRGGFPPGMTGSPIPKIGYFGWKTFELALDGVRVPKRNLMGPEGKAFLLMAKGLEGAR 238

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             +A  ++   + +L +A+ Y+  R   G  + +   ++  IA +A +I AA  L + + 
Sbjct: 239 AHTAARAIGLAQGALEDAVAYSLERRQFGMPIAEYQAIRFKIATMATEIEAARQLLYFVC 298

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           N  D  +   +EA+         KY+  +MA  V ++A++  GG+GY +   + R++R++
Sbjct: 299 NEIDSGRRCDKEASM-------VKYFASEMAERVTSQALQIFGGAGYTKLFPVERYWRDA 351

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+       + N L
Sbjct: 352 RLTKIFEGTSEIQQRIIANSL 372


>gi|302547333|ref|ZP_07299675.1| butyryl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464951|gb|EFL28044.1| butyryl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 389

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 143/396 (36%), Gaps = 26/396 (6%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS    E+ RMA     +   Y P   RWD     P  H   RR    GL        F 
Sbjct: 8   LSEQQLEVRRMARELARE--HYAPLAARWDAERL-PLPHEERRRLGDLGLLGITLPEEFG 64

Query: 126 PVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                    +          +  A  +   +   A++V L+    +     P        
Sbjct: 65  GSGAPVLDALVVIEELAKECRPAAFQVFECTTGPAAVVNLLGGDELRARCLP-------- 116

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P+ +    + + ++E   G+    +T++  +  D        +W      +D ++
Sbjct: 117 -----PVIRGDATMAVAISEPDAGSAATDMTTRAVRDGDSYRVSGSKRWISGGGHADQYL 171

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A++    G   +  L+ D    G+ Y   +  +G R   + ++ F +        L  
Sbjct: 172 LYARLADVPGARGIGALVVDADTPGISYGAQEKLMGFRGIPSCDIHFDDVRVPAANLLVD 231

Query: 305 STGP--VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +     +     L  L +A MS++  + ++   + Y + R   G  LI+    +  +AD+
Sbjct: 232 AGRFRELFTGFSLERLGNATMSLALAQAAVDRTVDYVQTRTAFGKPLIEFQATQLTLADM 291

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            L + AA  L +R A           E + A+  A        + A  V   A++  GG+
Sbjct: 292 VLQVEAARLLVYRAARGAGRGLPSPLEVSLAKCTAN-------ETAKRVTDLAIQLHGGN 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY EE  I R +R++   ++  G+       +++ L
Sbjct: 345 GYTEEYGIERLHRDAHGWALAGGTPTMQRTRIVSEL 380


>gi|111222522|ref|YP_713316.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
 gi|111150054|emb|CAJ61749.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a]
          Length = 386

 Score =  229 bits (585), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 126/373 (33%), Gaps = 33/373 (8%)

Query: 99  FHPAWHAL-------LRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
            H  W           RR+   GL        +           +          +    
Sbjct: 28  HHEEWERAGVVDRSAWRRAGEMGLLGLTVPEQYGGAGLSDPRFDVIVTEELAFGGITGLG 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   +   A  +  +TT      W P   S E                 + ++E   G+D
Sbjct: 88  LSLHNELLAPYLVGLTTDEQKARWLPGYCSGE-------------TVTAIAMSEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNG 269
           +  I +   +  D     +G K F+S+ +    +++A + +   G   +  L  + +  G
Sbjct: 135 LRGIRTTALRDGDHFVV-NGAKTFISNGLLADLVVVAVKTDPGAGRGSLSLLAVERATPG 193

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               R  +K+G R+  T EL F++       LLG+ +     +        L  A+ SV+
Sbjct: 194 FERGRKLDKVGLRAQDTAELFFNDARVPAANLLGEEHRGLHYLMRNLAAERLSIAVGSVA 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +      Y R R   G  +      +  +A +     A  AL      +       
Sbjct: 254 SARRAQELTRQYVRSRTAFGTTIGSFQNTRFVLAALHARTLAVQALVDGCVQARIAGTLT 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E+AA A+++A        ++    +   ++  GG G++EE  IAR YR+     I  GS
Sbjct: 314 PEDAAAAKLLA-------TELEFDAVDAGVQLHGGYGWMEEYPIARMYRDVRITRIFGGS 366

Query: 447 GNAMVLDVLNLLE 459
              M   V   L 
Sbjct: 367 SEIMKEVVGRALR 379


>gi|299771467|ref|YP_003733493.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298701555|gb|ADI92120.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 403

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 126/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 61  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 120

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 121 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 167

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 168 LSGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 227

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 228 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 284

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA    ++ R     DE  +       A     + 
Sbjct: 285 DRKQFGRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIA-------AVEGTSLI 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 338 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 396

Query: 461 GTNLF 465
           G   F
Sbjct: 397 GIAAF 401


>gi|332974475|gb|EGK11398.1| glutaryl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 396

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 128/363 (35%), Gaps = 38/363 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R+    GL     +      +   A+ + A  +  +       +   S      + 
Sbjct: 57  RNIMRKMGELGLLGMTIEGYGCAGLSHVAYGVVAREIEAVDSGYRSAMSVQSSLVMHPIW 116

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S EY                 GLTE   G+D  ++ ++ +K+  
Sbjct: 117 AYGTEAQKEKYLPKLASGEY-------------VGCFGLTEPDAGSDPGSMKTRAKKVDG 163

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL   +++ K   R+
Sbjct: 164 GYQLKGSKMWITNSPIADVFVVWAKDDDDD----IRGFVLEKGMKGLSAPKIEGKFSLRA 219

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
           + T E+   + F        D+    GP         L+ A   ++   +  AE      
Sbjct: 220 SITGEIVMDDVFVPEENAFPDIRGLKGP------FGCLNKARYGIAWGSMGAAEFCWKAA 273

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R      L    +++  +AD+  +IA     + R+    DE  +       A  
Sbjct: 274 RQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAALRVGRLMDEHNA-------APE 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L + 
Sbjct: 327 MISIIKRNNCGKALNIARVARDMHGGNGVSDEFHVIRHLMNLEAVNTYEGTHDVHALILG 386

Query: 456 NLL 458
             +
Sbjct: 387 RSI 389


>gi|153007114|ref|YP_001381439.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152030687|gb|ABS28455.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 579

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 78/458 (17%), Positives = 154/458 (33%), Gaps = 40/458 (8%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L +       WD+    P   A +      GL   +   +   +        R  +    
Sbjct: 47  LGSRERDFRAWDRAGEMP--RAFVDELKEAGLFSLVIPETHGGLGLGATAYSRVIQELAR 104

Query: 144 AQLE-AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                A  + + S      + L  T      + PK+ + E             +     L
Sbjct: 105 YDASVAVTVGAHSSIGMRGLLLFGTEEQKARFLPKLATGE-------------LIAAFCL 151

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D A+I +   +  D         W  +  ++D F + A+     G   +   +
Sbjct: 152 TEPGAGSDAASIKTTAVRDGDDWVLNGEKLWITNGGIADFFTVFARTSLD-GRGNITAFI 210

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSA 321
                 G+     ++K+G R+++T  +   +        L  V  G    MKI   L++ 
Sbjct: 211 VTRDLKGVSTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEVGKGFKLAMKI---LNAG 267

Query: 322 I-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
                  SV GM+  +  ++  AR R   G  +     +++ I  + +D  A+ ++   +
Sbjct: 268 RTGLGGGSVGGMKRLIELSVRQARERVQFGQPIASFESIQQKIGQMVVDCYASESVVNLV 327

Query: 377 ANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A   D   +  + EAA +++++    +           EA++   G GY+ E       R
Sbjct: 328 AGLVDRGFEDYAVEAAISKVLSSEALW-------RTADEALQIAAGQGYMREMPYELALR 380

Query: 436 ESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +S  N I  G+   + L + L  +       + L  ++        K    +L D     
Sbjct: 381 DSRINRIFEGTNEILRLFIALTAMNDVAEELKDLSVSMRGVFADPIKGF-GVLSDYAKRR 439

Query: 495 KEDKGLARFLTEKIAL----ASSAAALYRAGMNDIADV 528
            +     R    + +L     +  A L+      +A  
Sbjct: 440 AQLATGLRREKGRWSLLHPSLAEEAQLFEHSATALAVA 477


>gi|108798724|ref|YP_638921.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867842|ref|YP_937794.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434327|ref|YP_001070018.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108769143|gb|ABG07865.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693931|gb|ABL91004.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126234127|gb|ABN97527.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 391

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 130/366 (35%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L   +   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 40  DLREAAKSMGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W   I S               V     LTE   G++ A + ++  +   
Sbjct: 100 GFGTDEQKKQWLEGIASG-------------DVVASFALTEPGAGSNPAGLRTKAVRDDA 146

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + ++G K F+++ P +D F++ A+          +   L     +G+       K+G 
Sbjct: 147 GDWVVNGQKRFITNAPTADLFVVFARTRPADDRGAGIAVFLVPADADGVEVGAKDAKMGQ 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAEAIH 337
               T ++ F++        +  S        ++      +  A ++V   + +L E++ 
Sbjct: 207 EGAWTADVNFTDVRVPASALVGGSEDIGYRAALITLARGRVHIAALAVGAAQRALDESVA 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA      G  + D  +++  +AD    + A  AL    A  +   + R       RI  
Sbjct: 267 YAATATQGGTPIGDFQLVQAMLADQQTGVMAGRALVRDAARKWVTDEDR-------RIAP 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +C +MA  V   A++  GG+GY+ E  + R YR+     +  G+     L +   
Sbjct: 320 SAAKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVRLLRLYEGTSEIQRLIIGGA 379

Query: 458 LEKGTN 463
           L K   
Sbjct: 380 LVKAAQ 385


>gi|227822701|ref|YP_002826673.1| putative acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
 gi|227341702|gb|ACP25920.1| putative acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234]
          Length = 475

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 97/286 (33%), Gaps = 14/286 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +      L +TE   G+D+  +    +   D         +   + ++D
Sbjct: 193 EQRERYLLPAVRGDKFDALAMTEPDAGSDVRGMKCFARPDGDDWIVNGTKHFISHADIAD 252

Query: 242 AFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+          R     +   L D    G   +   N + +R      L F +    
Sbjct: 253 FVIVFIATGEEQTPRGPKKKITCFLVDRGTPGFEIREGYNSVSHRGYKNCILTFDDCRLP 312

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG+++       D      L  A  SV   R +   A+ YA  R   G  +     
Sbjct: 313 SSQILGEVHKGFDIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPIGANQG 372

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+  +I AA  L+   A   D     + E           K +  +M   V  E
Sbjct: 373 VSFKLADMITEIDAADLLTLSAAWRLDHGLPSNRE-------IASAKVFATEMLARVTDE 425

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 426 AIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 471


>gi|226361423|ref|YP_002779201.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239908|dbj|BAH50256.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 385

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 134/376 (35%), Gaps = 31/376 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGH 150
             W+     P      RR    G+        F     K              A +  G 
Sbjct: 30  HEWEDEGHPP--RDFYRRLGELGVLGIQVPEEFGGGGEKSFKFAAVVGEETAAAGVTFGS 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +      +    +    + W P   S +                 + +TE   G+D
Sbjct: 88  YSVHTNLILPYLLEYASDEQKQRWLPGFASGDIM-------------FAIAMTEPGTGSD 134

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFLVPRLLEDG 265
           +A I +  +  +DG  Y LSG K F++   ++D  +++ +            +  L+ D 
Sbjct: 135 LANIATSAKLSADGSHYVLSGAKTFITGGALADRILVVCRTAPSTPEDRRAGLTILVVDT 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  G    R   KIG +++ T EL F++    +   LG+       +        L  A+
Sbjct: 195 TAEGFAVGRKIEKIGLKASDTAELSFTDVKVPVADRLGEEGAGFRYLTHNLAQERLSIAL 254

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +    +L  AI Y + R V G  +      K  +A+ A ++ A   ++ R     D 
Sbjct: 255 GGSATAAAALQHAIAYVKERTVFGKPVAAFQNTKFVLAECATEVEAIQLMADRALELHDA 314

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA A       K +C + A  VI + ++  GG GYI E  IAR Y ++  + I
Sbjct: 315 GELTVADAAKA-------KLFCTEAAGRVIDKCLQLHGGYGYILEYPIARLYADTRVSRI 367

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M   +   L
Sbjct: 368 YGGTSEVMKTIIAKDL 383


>gi|134099393|ref|YP_001105054.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912016|emb|CAM02129.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 386

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 132/387 (34%), Gaps = 36/387 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L  +    ER D+V   P     +  R++  GL+ +                    R  
Sbjct: 23  ELDPHEDEVERLDEV--PPGLAERIRDRALAAGLYAANMPEELGGGGLDAVGMALVERE- 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                    L         +VA  +               E       P  +      L 
Sbjct: 80  ---------LGRAGYALQMLVARPSNILQA-------CEGEQRERYLLPAIRGERHDCLA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQV----EGRVGCF 256
           +TE   G+D+ ++T++  +  D  Y L+G K F+S   +  F++  A        R    
Sbjct: 124 MTEPGAGSDVRSMTTRAVRDGDD-YVLNGTKHFISHADAADFVILFAATGTERTPRGEKN 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           L+   L D    GL  +R  + + +R     EL F +     G  LG+       +    
Sbjct: 183 LITAFLVDLDTPGLTVRRGSSCVSHRGYHQCELSFEDCRIPAGQRLGEEGRGFELMGQWL 242

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  SV   R  L  A  +A +R   G  +     +   +AD+A ++ AA  L+
Sbjct: 243 GASRLSVAATSVGRGRRVLELATEWAAQREQFGQPIGRFQGVGFQLADMATELDAAELLT 302

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R A   D+        A     A + K +  +    +   A++  GG G + E  + R 
Sbjct: 303 LRAAWKLDQ-------DAMTDQDAAMAKLFASEALGRITDRAVQIFGGMGLMAELPVERF 355

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460
           +R++    I  G+       +   + +
Sbjct: 356 WRDARVERIWDGTSEIQRHIISRSMLR 382


>gi|149926061|ref|ZP_01914324.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
 gi|149825349|gb|EDM84560.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105]
          Length = 376

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 137/373 (36%), Gaps = 25/373 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             WD+    P    L +++   GL    +           A ++R + L   A       
Sbjct: 21  NDWDEAGEFP--RELYKQAGDMGLLGLGYPEEVGGFECTLAERLRLSNLVCSA------- 71

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  + +      +  P +      ++            + K      L +TE  GG+D+
Sbjct: 72  GSGGLLAGLFSHNIGLPPLLNHGGEELVQM-----IAPAVLKGEAISALAITEPSGGSDV 126

Query: 212 AAITSQG---QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           A + ++    QK     Y ++G K F++S +   ++ +A   G  G   +  L+  G+  
Sbjct: 127 ANLKTKADLFQKDGVPHYRINGEKVFITSGVRADWLTVAVRTGEPGARGISVLMVPGNAK 186

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL    LK K G   + T  + F N      +L+G        + +      L  A   V
Sbjct: 187 GLTRSPLK-KTGWWMSDTASIYFDNVEVPASYLVGKEGKGFRIIMENFNTERLMLAGACV 245

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV L EA+ +A+ R   G  LI+  V+   +ADI + I A  A         D+   
Sbjct: 246 GFSRVCLNEALDWAQNRQTFGKRLIEHQVIAHKLADIRMKIRATEAWFDETIARIDQGDI 305

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E  A   ++    K    +       EA++ +GG G++   S  R YRE     I  G
Sbjct: 306 NEELVADICLL----KNQSTQTLQHCANEAVQILGGMGFMRGSSTERIYREVKVMCIGGG 361

Query: 446 SGNAMVLDVLNLL 458
           +   M    +  L
Sbjct: 362 AEEIMKELAIRQL 374


>gi|226361662|ref|YP_002779440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240147|dbj|BAH50495.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 397

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 127/363 (34%), Gaps = 34/363 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L +     G    +       +          A     A +    L++            
Sbjct: 53  LKKAMAEVGFFGIMIPEEHGGLGLGVFEYCLVAEELSRAWMSVSGLLARGNGMGGGF--- 109

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            TP       PK+ + EY                  L+E   G+D+A I+ +  +  D  
Sbjct: 110 -TPEQEAALLPKVAAGEY-------------LGAYALSEAEAGSDVANISCRATRDGDDW 155

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRV----GCFLVPRLLEDGSPNGL---CYQRLKNK 278
                  W   +  +D  ++ A+ +           +   L D    G           K
Sbjct: 156 VVNGTKMWCTYADEADYLVLFARTDPHKDPAKPHRGISAFLIDKQRGGFPEGISGTKIRK 215

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG    +T EL F N       +LG+             +    +A  ++   R +L ++
Sbjct: 216 IGYFGWSTWELSFDNFRVPATAMLGEEGKGFYLAVSGLEVGRAHTAARAIGLARGALEDS 275

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  L D   ++  +A +A DI AA  L + +A   D  +  S EA+  ++
Sbjct: 276 IAYLHTRRQFGHELADFQHLRFKVAKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKL 335

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A        +MA  V +EA++  GG+GY  +  + RH+R++    I  G+    +  + 
Sbjct: 336 VA-------TEMAERVTSEAVQIHGGAGYTTDFQVERHWRDARLTKIFEGTSEIQMRIIS 388

Query: 456 NLL 458
           + L
Sbjct: 389 DEL 391


>gi|119714318|ref|YP_921283.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119534979|gb|ABL79596.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 387

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 82/404 (20%), Positives = 144/404 (35%), Gaps = 35/404 (8%)

Query: 68  CTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              +E+A         ++H      +  D ++    W +L+  S+  GL+ +    +   
Sbjct: 6   DELEEMAATTRRFIRERIHPIEQEVDDTDHID-PQVWQSLVDESVELGLYTANVPETLGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A + R    +        +L++        V    T      +            
Sbjct: 65  PGLTIAEQTRLWEEFGHTSWPFSYLLARPHR----VLFACTEEQRSRYLD---------- 110

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+     A    LTE   G+D +A+ ++ +K+  G Y L+G K F+S   +D  I+ 
Sbjct: 111 ---PVLAGKRAQCFALTEPGAGSDNSAMRTRAEKVEGG-YVLNGAKHFISHGNADFAIVF 166

Query: 247 AQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A      R     V   L D    G    + +  +G       EL F N F     D  V
Sbjct: 167 AVTGPPLRGRTPQVTAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVP---DDQV 223

Query: 305 STGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              P E +++ +       L  A   V  M   L  +I Y R R V    L D+  ++  
Sbjct: 224 LGTPGEALRLGLASVAQRRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWM 283

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRS----EEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A+ A++   A   +++ A   DEA++      E +        I K    +    V   
Sbjct: 284 LAEAAMEPYLAREATYKAARLCDEARAAGRSEIELSRLFAREISIAKLHATRALNRVADV 343

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++  GG G+  E  + R YR++    I+ G+       +   L
Sbjct: 344 AVQVHGGMGWCREYPVERLYRDARVFRIIEGADEVHKEIIAKAL 387


>gi|327479105|gb|AEA82415.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 393

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 85/412 (20%), Positives = 146/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A  A+   P++       ER D   F        R     GL  +    
Sbjct: 23  ERMVQASAAQFA--ADKLAPRVLEAFRH-ERTDPAIF--------REMGETGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 72  AYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPIFEFGNEATRQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGE----IRGFVLEKGWEGLSAPTIHGKVGLRASITGEIVMDNVFCPEENA 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  I K   C  A  V  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKALDVAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|84501722|ref|ZP_00999894.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84390343|gb|EAQ02902.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 385

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 125/359 (34%), Gaps = 26/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + + +   G  C   D  +  +              +  +     +   +      + 
Sbjct: 41  REIWKSAGEQGFLCMYADEKYGGLGLTDFRYDMILTEEIGPREPGLFIGLHNRIVGPYLQ 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P + S                 + + +TE   G+D+A I ++  +  D
Sbjct: 101 NFASDAQREKYMPGVVSG-------------DTILAIAMTEPGTGSDLAGIKTRAVEHED 147

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K ++S+  ++D  ++ A+         V     +    G    R   K+G  
Sbjct: 148 H-WILNGSKTYISNGFLTDLVLVAAKTNPEASHE-VGLFWVENGTPGFDRGRNLKKVGLE 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYA 339
           S  T EL F +        L    G  + M +      L  A+  V+    +    + Y 
Sbjct: 206 SQDTAELFFDDVKVPKANVLGDPRGGFKTMMMNLAEERLIGAVGFVARAEHAFDITMDYI 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +      +  +A    ++ AA AL+          +  +E       MA  
Sbjct: 266 MERRAFGKAIGTFQNSRFKMASCRTELDAAWALTDHCVREHMAGRLSAE-------MAAE 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +  ++   V+ E ++  GG+GY++E  I+R YR++  + I  G+   M   +   L
Sbjct: 319 AKLYTSEVEGRVVDECLQLHGGAGYMDEYEISRLYRDARISRIYAGTSEIMREIIGRGL 377


>gi|295395552|ref|ZP_06805746.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971571|gb|EFG47452.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 391

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 140/371 (37%), Gaps = 33/371 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTS 158
           H   + L+ +    GL    +D  +  +     A  +    L    Q  A  L +     
Sbjct: 39  HEFPYKLVAKMGQMGLFGLPFDEKYGGMGGDYFALCLAIEELARNNQSLAITLEAGVSLG 98

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +    T    ++W PK+                S     GLTE   G+D     ++ 
Sbjct: 99  AMPIYRFGTEEQKQEWLPKLTDG-------------SGLAAFGLTEAEAGSDAGGTKTKA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGCFL-----VPRLLEDGSPNGL 270
             + +G + ++G K F+++  +D   ++   A    R G        +  ++      G 
Sbjct: 146 V-LENGEWVINGSKQFITNSGTDITRLVTATAVTGTRTGRDGKEKPEISTIMIPTGTPGF 204

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
             +   +K+G  S+ T  L F N        L     G    ++IL    +  A +SV  
Sbjct: 205 TAEPAYDKVGWNSSDTHPLTFDNVRVPEENLLGERGRGYANFLRILDEGRIAVAALSVGA 264

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  + E++ YA+ R   G  + +   ++  IA +   + AA A  +  A+  +      
Sbjct: 265 AQGCVDESVRYAKERVTFGKPIANYQGIQFKIARMEARVVAARAAYYLAASRMESGLPFK 324

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A+++A          A     +A +  GG G++ E  +ARHYR+S    +  G+ 
Sbjct: 325 KEAAVAKLIAG-------DAAMDNARDATQIFGGYGFMNEYLVARHYRDSKILEVGEGTT 377

Query: 448 NAMVLDVLNLL 458
               + +   L
Sbjct: 378 EVQYMLIAREL 388


>gi|108800705|ref|YP_640902.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869844|ref|YP_939796.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108771124|gb|ABG09846.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695933|gb|ABL93006.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 382

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 139/379 (36%), Gaps = 28/379 (7%)

Query: 100 HPAWHALLRRSIHDGLHC-SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT- 157
           H A+  L R  +   +            + R+   ++ A  +  MA  E           
Sbjct: 10  HDAFRQLARDFVEKEVVPQYPEWEKAGRMPREVFKQMGALGMLGMAIPEEYGGAGIDDYR 69

Query: 158 ---------SASMVALMTTPRVHKDWAPKIFS---REYDPTNKAPMQKTSVAIGLGLTEK 205
                    + ++V L T     +   P        E        +   ++   + +TE 
Sbjct: 70  YNVVLQEEAARALVTLSTVRTQLEVILPYFLHYANDEQRKRWFPGLADGTLLTAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLL 262
             G+D+A + +   +  D  Y ++G K F++  + +D  +++A+   +       +  ++
Sbjct: 130 GTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRRGLSLIV 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R   K+G +   T EL F++       LLG+   +   +        L 
Sbjct: 189 VEDGMPGFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLGHNLAQERLT 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ SV+  R +L   I Y + R   G  +      K  +A ++ +I AA  +  R    
Sbjct: 249 VAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEIEAAQTMLDRAVLD 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     E+AA         K +C +M    +   ++  GG GY+ E  IAR Y ++  
Sbjct: 309 HVDGVLSREDAAR-------VKLFCTEMQARAVDRCLQLFGGYGYMMEYPIARLYNDARV 361

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M + +   L
Sbjct: 362 ARIYAGTSEVMKVIIAKSL 380


>gi|297194266|ref|ZP_06911664.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720558|gb|EDY64466.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 132/365 (36%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      ++       S      +   
Sbjct: 40  RDFYHKLGELGIFGINVPEEFGGAGLDT-HKFEAVLYEETSRAGVQFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L+ T    K +  K  + E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKLLATDEQKKRYLTKFVTGEEM-------------WALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTSAPREDDRRFGISLFAVDTKSEGYSVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       LLG+ N     +           A  + +  + ++ 
Sbjct: 206 DKLGLRTSDTAELAFVDVKVPVEDLLGEENKGFYYLGQNLPSERWGIAFGAYAQAKAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y   R V G  +      K  +A    ++ AA A++ R   + D  +  + EAA A
Sbjct: 266 FAQQYVTDRTVFGKPVASFQNTKFELAACQAEVDAAEAVADRALEALDAGELTAAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|17989163|ref|NP_541796.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|256043345|ref|ZP_05446280.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256111648|ref|ZP_05452638.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 3 str. Ether]
 gi|260564551|ref|ZP_05835036.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265989766|ref|ZP_06102323.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265993126|ref|ZP_06105683.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|17985015|gb|AAL54060.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis
           bv. 1 str. 16M]
 gi|260152194|gb|EEW87287.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763996|gb|EEZ10028.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000435|gb|EEZ13125.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 380

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 126/367 (34%), Gaps = 33/367 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE  R A  +  Q     PG    D+    P   A L      G    +    +    
Sbjct: 5   DTQEQIREAARDFAQ-ERLAPGAAARDREHAFP--RAELTEMGALGFLGMLVPEEWGGSD 61

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTN 187
                   A             ++S   +   M  L   T    + + PK+   E+    
Sbjct: 62  LGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEW---- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                      G  LTE + G+D +A+ ++ +   D        ++  S    +  I+ A
Sbjct: 118 ---------IGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFA 168

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
             +   G   +   +      G     +++K+G  S+ T  L F+N    +    N    
Sbjct: 169 VTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPV---ENRLGA 225

Query: 308 PVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             E  KI +       +  A  +V   R +   A  YAR R   G  +I+   +   +AD
Sbjct: 226 EGEGYKIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLAD 285

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A  I  A  +    A   +  K    EA+ A+++A        +MA  V + A++  GG
Sbjct: 286 MATRIETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGG 338

Query: 422 SGYIEER 428
            GY+ + 
Sbjct: 339 YGYLADY 345


>gi|99081096|ref|YP_613250.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99037376|gb|ABF63988.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 407

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/368 (20%), Positives = 133/368 (36%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     +  +          AR           +MS  S      + 
Sbjct: 66  EIFREMGEMGLLGTTIPEEYGGLGGGYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                 GLTE   G+D A + ++ +K +D
Sbjct: 126 AYGSEEQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTRAEKTAD 172

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E   G   +   + D    GL   +++ K+  R+
Sbjct: 173 GYRLTGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLDKGTKGLSAPKIQQKMSLRA 230

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+                   VE +K     L+ A   +S   +  AEA  +A R 
Sbjct: 231 SITGEIVLDGVEV----GEEALLPHVEGLKGPFGCLNRARYGISWGVMGAAEACWHAARQ 286

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               RH  G  L +  + +  +A++  +IA     S R+    DEA +       A  M 
Sbjct: 287 YGLDRHQFGRPLANTQLFQLKLANMQTEIALGLQASLRVGRLMDEANA-------APEMI 339

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +L  
Sbjct: 340 SIVKRNNCGKALEIARHARDMHGGNGISLEFQVIRHMMNLETVNTYEGTHDVHAL-ILGR 398

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 399 AQTGLQAF 406


>gi|256371816|ref|YP_003109640.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008400|gb|ACU53967.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 381

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 145/369 (39%), Gaps = 22/369 (5%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E W++    P  H + +     GL    +D ++       ++ +            A  +
Sbjct: 27  EEWERAHSFPG-HTVFKALGAAGLLGLEYDPAYGGQGADHSYTVIFGEELGRMGFGALAM 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 + S+V  M TP + +       S E       P  +      + ++E   G+D+
Sbjct: 86  ------AISVVTDMATPSLARYG-----SHELKLHYLVPTLRGDSIASVAVSEPDAGSDV 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+ ++  +  D         +  +   +D   +LA+     G   + +++      G  
Sbjct: 135 AALRTRAVRDGDDWVITGTKLYITNGTQADWICLLARTSDEGGYRGMSQIVVPTDAPGFR 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGM 328
             R  +K+GN ++ T EL        +   +  +  G  + M       + ++  +V  M
Sbjct: 195 VARALDKLGNHASDTAELVLEECRVPVSNTIGTIGRGFQQQMAQFQNERMIASYSAVGAM 254

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L     YAR R V G  L+ +  ++  +A+++ ++      ++  A ++   +  + 
Sbjct: 255 ERALERTAAYARERMVFGEPLLAKQYVQFRLAELSAEVDLLRHYNYACAEAYMAGEDTTR 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                   A I K    +++ AV    ++  GG+GY+EE  ++R++R++   SI  G+  
Sbjct: 315 -------FATIAKLTAGRLSRAVADWCLQLHGGAGYMEETWVSRYFRDARLLSIGGGADE 367

Query: 449 AMVLDVLNL 457
            M+  +  L
Sbjct: 368 VMLQILTRL 376


>gi|325527857|gb|EGD05120.1| acyl CoA dehydrogenase oxidoreductase protein [Burkholderia sp.
           TJI49]
          Length = 379

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 143/404 (35%), Gaps = 31/404 (7%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+ LG         +  R   +   +L  +    +R D+        AL       G+  
Sbjct: 2   LKRLGVGDADLEIADAIR--RFARAELAPHAAQVDR-DETSTTRYVPAL----AELGVMG 54

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +       A  I A      A      ++     +   V +     +   +   
Sbjct: 55  MNLPERWGGTGASPAAIILALAEIAQACAATSSMIGAHYLATDSVLIGGDDALRARYLSD 114

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
             +              +      LTE + G++ A +T+Q  +  DG Y + G K F+S+
Sbjct: 115 AATG-------------AKLGAFALTEPQAGSNPAGMTTQAVRDGDG-YRIHGVKHFISN 160

Query: 238 PMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +  FI++ A+    +G   +   + D    G+     +  +G       E+ F     
Sbjct: 161 ADAAQFIVVYAKTAPELGTRGISAFVVDRDTPGVSVSAPEKLMGIHGAPAHEVAFDCVVP 220

Query: 297 FLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                    +G    MK+L    LD A  S+     +L +AI +A++RHV G  L ++  
Sbjct: 221 ASNRLGEEGSGFRTAMKVLDNSRLDVAATSLGIAEAALGDAIDWAKQRHVGGEPLANKQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++   AD+   + AA  L+ + A      +  ++       +A + K +  +M   V   
Sbjct: 281 LQWRFADMKTQLEAAWLLTLQAAARRAAGEPFTD-------LASMAKLYASEMVAFVTDA 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A++  GG G+  E  I R  R++    I  GS       +   +
Sbjct: 334 ALQVHGGYGFTREMRIERLVRDARILRIYEGSSEIQRTVIARTM 377


>gi|302527299|ref|ZP_07279641.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302436194|gb|EFL08010.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 382

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 119/351 (33%), Gaps = 27/351 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G    +    +  V    A   R         +     +        ++    TP   + 
Sbjct: 47  GFFGLLAPAEYGGVDVSTACFARVTEELARGWMSLAGAIGGHSVITYLIKTFGTPEQREK 106

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P              M +  +   + LTE  GG+D+ A+ +      DG        W
Sbjct: 107 YLP-------------AMAEGRIRATMALTEPGGGSDLQAMRTHAVPGDDGYTITGSKTW 153

Query: 234 FLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             ++  S    +L   +         +  LL +   +GL   +   K+G R     EL F
Sbjct: 154 ISNAAHSGLIGLLCITDREASPAHRGMSVLLVEPG-DGLTISKKLPKLGYRGVEACELVF 212

Query: 292 SN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L G  N     +     +  +  A  ++   + +L +A+ YA+ R   G 
Sbjct: 213 DGRKVPADAVLGGTPNQGWSQMMRGLEVGRIQVASRALGVGQAALNDAVRYAQERESFGK 272

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     +   +AD+A  + AA  L+   A   D  +    EA  A       K +  + 
Sbjct: 273 PIWKHQSVGNLLADMATKMRAARLLTLDAAEKLDAGERADMEAGMA-------KLFASET 325

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V  +A+   GG GY +E  + R++R++P   +  G+       +   L
Sbjct: 326 AMQVALDAIRVHGGYGYSKEYDVERYFRDAPLMIVGEGTNEIQRNVIAAQL 376


>gi|239501349|ref|ZP_04660659.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB900]
          Length = 403

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 61  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 120

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 121 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 167

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 168 LSGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 227

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 228 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 284

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 285 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 337

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 338 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 396

Query: 461 GTNLF 465
           G   F
Sbjct: 397 GIAAF 401


>gi|220914896|ref|YP_002490204.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
 gi|219952647|gb|ACL63037.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 383

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 133/370 (35%), Gaps = 27/370 (7%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           VE H     L+R     G   + +D  +E            A      +     +   + 
Sbjct: 32  VEQHEFPSDLVRAFAGLGFMGTAYDPDYEGGGLGTRGAAIVAETLAEVEPGFAAIYLCNS 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
              S++A   +  + ++W              AP+ +       G++E  GG+D+A+  +
Sbjct: 92  APMSVIARFGSDALKREWL-------------APLCRGDCIASFGVSEPHGGSDVASTRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAF---IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +  +  D  + L+G K F ++  +D      ++A  +   G   +   +      G    
Sbjct: 139 RAVRDGDD-WILTGSKVFSTNAGTDLHGLSAVVAVTDPDKGAKGLSTFVVPVGTPGFRVG 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +   K+G R   +VEL F         ++G        +     L  +  A  ++   R 
Sbjct: 198 KAGRKVGWRIAPSVELFFDECRIPGRLMVGAQGEGLRQILTTLSLGRILVAAAALGLSRK 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A  Y R R V G  + +   +   +AD    I AA  +    A   D  +    E 
Sbjct: 258 ALGLAARYGRDRRVGGRPIFENQGLTFPLADAMTQIHAAELMVRNAACLADAGRPFRLE- 316

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   +TK +  +MA  ++  A++  GG G  E+  ++    E+    I+ G+    
Sbjct: 317 ------TSMTKLFASEMAGEIVDLAVQVHGGYGIFEDYEVSGLMGEAKVLQIVEGTSEVQ 370

Query: 451 VLDVLNLLEK 460
            L +   L +
Sbjct: 371 RLVIARELLQ 380


>gi|126437250|ref|YP_001072941.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126237050|gb|ABO00451.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 382

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 19/309 (6%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTEK 205
                    V ++   + + TP +           E+   T   P     +   L +TE 
Sbjct: 76  MHYAGAPGGVFASLFTSGIATPHMTAS------GDEWLIDTYVRPTLHGELIGSLAITEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D+  +T++ ++  D  Y ++G K +++S +   +++ A   G  G   V  L+ D 
Sbjct: 130 GGGSDVGHLTTRAERDGD-SYVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVSLLVVDK 188

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A 
Sbjct: 189 GTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSERVGLAA 248

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            + S  +  L   + + R R   G  LI +  ++  +A++A  +  A   +  +      
Sbjct: 249 QAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHVVERQLS 308

Query: 383 AKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            ++    E  +A+  A     W       V  +A++  GG GY+ E  + R YR+     
Sbjct: 309 GETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILG 361

Query: 442 ILLGSGNAM 450
           I  G+   +
Sbjct: 362 IGGGTTEIL 370


>gi|22760213|dbj|BAC11107.1| unnamed protein product [Homo sapiens]
 gi|119588237|gb|EAW67833.1| acyl-Coenzyme A dehydrogenase family, member 8, isoform CRA_a [Homo
           sapiens]
          Length = 288

 Score =  229 bits (584), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 12/259 (4%)

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLED 264
           R G+D A++ +  +K  D  Y L+G K F+S    SD ++++ +  G  G   +  ++ +
Sbjct: 37  RSGSDAASLLTSAKKQGDH-YILNGSKAFISGAGESDIYVVMCRT-GGPGPKGISCIVVE 94

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSA 321
               GL + + + K+G  S  T  + F +    +   +     G +  ++      ++ A
Sbjct: 95  KGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIA 154

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+     S+     +   R   G  L     ++  +AD+A  + AA  +    A +  
Sbjct: 155 SCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVAL- 213

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 EE   A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+S  + 
Sbjct: 214 -----QEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQ 268

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           IL GS   M + +   L +
Sbjct: 269 ILEGSNEVMRILISRSLLQ 287


>gi|302502975|ref|XP_003013448.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371]
 gi|291177012|gb|EFE32808.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371]
          Length = 618

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 120/523 (22%), Positives = 199/523 (38%), Gaps = 80/523 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    I       D++L  +++       P  + K+L      V+S    + 
Sbjct: 4   SSSTEGFFQVQPSIQP-QIQEDAVLRRIVSLHLPSPLPPSLEKDLTRFSSLVISKPVLDF 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W AL   +I +GL     +        + 
Sbjct: 63  AAEAERNQPYLKPLSTFGIENKQDPLVTGEGWRALQDINIREGLVGLAPEPGLTGHGTQW 122

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
             ++        ++    HL +PS       A++T P    D A K+ SR  D  N    
Sbjct: 123 NTRV--------SKGIKSHLWTPSS------AMVTCPGSMTDGAAKLLSRHLDSENGRIF 168

Query: 192 QKT-----------SVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI-------- 225
            +            +   G  +TE+ GG+D+    +  +K         DG+        
Sbjct: 169 AEALKRLTSRDPSIAWTSGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSEGMPLG 228

Query: 226 -YCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-------RLLEDGSPNGLCYQRLK 276
            + L G KWF S+  ++  IMLA+  E  +  F  P       +   +   NG+  QRLK
Sbjct: 229 PWRLDGFKWFSSATDANMSIMLAKTGEHSISAFYAPLRRQVKGKDPRESELNGVRIQRLK 288

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK G ++  T ELE     G+L+G        +  +  +    + I SVS    SLA   
Sbjct: 289 NKFGTKALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICR 348

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI- 395
            Y++ R  SG +L D P   R +A   +  AA+  L+F +      ++  S  +  A   
Sbjct: 349 AYSKVRVTSGRLLQDTPSYVRTLARDHVKYAASMHLTFFIVALLGVSEGSSSSSCMASQT 408

Query: 396 ----------------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYR 435
                           + P+ K      A   +  +ME +GG GY+E       I+R +R
Sbjct: 409 NILPRDNNHTLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNISRIFR 468

Query: 436 ESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDL 476
           ++   SI  G+   M  D++ +++  KG +  + L   +   L
Sbjct: 469 DTCVLSIWEGTTEVMADDLMRVVKGSKGPDCLDALDKWVAHGL 511


>gi|260429276|ref|ZP_05783253.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260419899|gb|EEX13152.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 437

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/429 (18%), Positives = 144/429 (33%), Gaps = 43/429 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD--KVEFH 100
           L       P     EL    E      A     +A  N P        G R +  +V   
Sbjct: 15  LRTFAGEVPGW-DPELSQ--EVAGHFAAFAEGVLAPLNGPG----DREGCRLENGRVRMP 67

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             + A        G        +F             + ++  A      + +    + S
Sbjct: 68  EGFGAAYAELAESGWQGLTAPEAFGGQELDHLTAAAVSEIFSGANHSLQMVTNLVPGAVS 127

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            + +  TP   + + PK+ S  +                + LTE   G+D++ I  +  +
Sbjct: 128 TLLVHGTPAQQETYIPKLASGAW-------------LSTMCLTEAGAGSDLSRIRCRAVR 174

Query: 221 ISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE-GRVGCFLVPRLLE----DGSPNGL 270
                + + G K F+S    D       ++LA+      G   +   L     DG  N +
Sbjct: 175 DG-ESWRIEGQKIFISGGDQDLSEGILHLVLARTGAPEDGVKGLSLFLCPSDSDGVRNAI 233

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              R++ K+G  ++ T ++EF      L+G        +  M     LD ++  V+    
Sbjct: 234 TVTRIEEKLGLHASPTCQMEFDGASAELVGAEGRGLAAMFTMMNHARLDVSLQGVAHAAR 293

Query: 331 SLAEAIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + A A  YA  R            L D P ++R +A+       A A+        +   
Sbjct: 294 AHAIAAAYAAERRQGRQPDGSDAMLADHPDVQRMLAEQQDAARVARAMCHIALGELERG- 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +  A    + P+ K WC +         ++ +GG GY+EE  +A+ +R++   +I  
Sbjct: 353 ---DAPALVEFLTPLCKIWCTEAGLRAADLGIQILGGYGYLEEYGVAQIWRDARITTIYE 409

Query: 445 GSGNAMVLD 453
           G+       
Sbjct: 410 GANGIHARP 418


>gi|196166809|gb|ACG70945.1| putative acyl-CoA dehydrogenase [Planobispora rosea]
          Length = 484

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 120/354 (33%), Gaps = 25/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALMTT 167
           +   G         +                 L  Q  A    L       A  +  +TT
Sbjct: 149 AGRQGFLGLEVPEEYGGSAAGDYRFNAVLGEELSGQSAALSSSLGIHYDVVAPYLVELTT 208

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K W P+  S E                 +G+TE  GG+D+AA+ +   +       
Sbjct: 209 EEQKKRWLPRFCSGEM-------------ITAIGMTEPSGGSDLAALRTTAVRDGSDWIV 255

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                +  +   +D  ++ A+         +     +    G    R  +K+G     T 
Sbjct: 256 NGSKTFITNGYCADLVVVAARTSPEKKAKGITLFAVETGMEGFTRGRKLDKVGQPEADTA 315

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F N       ++G+++     + +      L SA+ +++     LAE + Y R R  
Sbjct: 316 ELFFENVRVPEENVIGEIDRGFIAMMERLPQERLGSAVANLAHAAAVLAETLVYVRERKA 375

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +      K  +AD+   I  + A         D+  +   E   + + A   K W 
Sbjct: 376 FGQAVGSFQHNKFVLADLVTKIEVSQAF-------LDQCITAHTERELSAVDAAKAKMWT 428

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   V+   ++  GG GY++E  +AR + ++    I  GS   M   +   L
Sbjct: 429 SEVQGEVLDACVQLYGGYGYMKEYRVARAWMDARVTRIWAGSNEIMREIIGRDL 482


>gi|118463794|ref|YP_883895.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
 gi|118165081|gb|ABK65978.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           104]
          Length = 382

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 133/384 (34%), Gaps = 38/384 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV----RKQAHKIRA 137
           P    +   G+ WD+  F  A           GL                 R  A  +  
Sbjct: 28  PNHEKWERDGQ-WDRSLFVEAGK--------LGLLGFSVPERLGGPGVDDFRYNAIVVDE 78

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            +    A       +   +    +V L TTP   + W P + + E               
Sbjct: 79  LQRAGAAAEAIAFSLQNDIVLPYLVEL-TTPEQQRRWLPGVVTGE-------------TV 124

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+ +TE   G+D+A I +   +  D  Y ++G K F+S+       ++A          
Sbjct: 125 LGIAMTEPGTGSDLAGIRTTAVRDGDH-YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
           +  L+ D    G    R   KIG  +  T EL F++        L     G  + MK L 
Sbjct: 184 LSLLVVDADTPGFGRGRNLEKIGLHAQDTSELSFTDMRVPAENLLEAEGRGFYQLMKNLP 243

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ +V+      AE + Y ++RH  G  +      +  +A++A +I  A     
Sbjct: 244 QERLSLAVGAVAAAEAVFAETLDYVKQRHAFGAPIAAFQNSQFVLAELATEIDVARTYLD 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               +    +  +  AA  +        W   +        ++  GG GY+ E  +AR +
Sbjct: 304 DCLAAHLTGELTAARAARLKW-------WTTDLQVRTADRCLQLHGGYGYMREYGVARAF 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
            ++   +I  G+   M   +   L
Sbjct: 357 VDARIQTIYGGTNEIMKTIIAKDL 380


>gi|53723050|ref|YP_112035.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76818683|ref|YP_336307.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|167743960|ref|ZP_02416734.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|167821140|ref|ZP_02452820.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167899589|ref|ZP_02486990.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
 gi|167907904|ref|ZP_02495109.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167916265|ref|ZP_02503356.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|167924104|ref|ZP_02511195.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
 gi|254185800|ref|ZP_04892318.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254262945|ref|ZP_04953810.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|254300854|ref|ZP_04968298.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|52213464|emb|CAH39510.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243]
 gi|76583156|gb|ABA52630.1| predicted acyl-CoA dehydrogenases [Burkholderia pseudomallei 1710b]
 gi|157811391|gb|EDO88561.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157933486|gb|EDO89156.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|254213947|gb|EET03332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 383

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 139/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H +  +    G+       ++       ++++      +MA+  
Sbjct: 23  NPHVDEWEEAGIFPA-HEVFGKLGALGMLGLSKPAAYGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +          AP         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLAPAIAGRQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  D         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTSARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R R + G  ++D  ++   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SI+R YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|319781710|ref|YP_004141186.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167598|gb|ADV11136.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 398

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 133/385 (34%), Gaps = 31/385 (8%)

Query: 88  GPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
                R +    +  +  A+ R     GL        F  +          AR       
Sbjct: 37  DRLAPRIEDAYLNETFDTAIFREMGEAGLLGINIPEEFGGLGANYVTYGLVAREVERVDS 96

Query: 147 EAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
               +MS  S      +    +    K + PK+ S E+                 GLTE 
Sbjct: 97  GYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPKLASGEW-------------IGCFGLTEP 143

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D   + ++ +K ++G        W  ++P++D F++ A+++G  G   +   + + 
Sbjct: 144 DAGSDPGGMKTRAEKTANGYKLSGSKMWISNAPVADVFVVWAKLKGENGKDEIRGFVLEK 203

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
              GL   ++  K+  R++ T E+            L  + G          L+ A   +
Sbjct: 204 GMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGPFG---CLNRARFGI 260

Query: 326 SGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S   +  AE   +  R     R   G  L    + ++ +AD+  +IA     S R+    
Sbjct: 261 SWGSMGAAEDCWHRARQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLL 320

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE K        A  M  I K   C  A  +  +A +  GG+G      + RH +     
Sbjct: 321 DEGK-------MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIGYHVMRHAQNLETV 373

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF 465
           +   G+ +   L +L   + G   F
Sbjct: 374 NTYEGTHDVHAL-ILGRAQTGLQAF 397


>gi|126445155|ref|YP_001063921.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126458589|ref|YP_001076804.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|167725021|ref|ZP_02408257.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
 gi|167829505|ref|ZP_02460976.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167850987|ref|ZP_02476495.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 gi|217422006|ref|ZP_03453509.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226196934|ref|ZP_03792512.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|237510333|ref|ZP_04523048.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia
           pseudomallei MSHR346]
 gi|242311315|ref|ZP_04810332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|254184581|ref|ZP_04891170.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|254193879|ref|ZP_04900311.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|126224646|gb|ABN88151.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126232357|gb|ABN95770.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|169650630|gb|EDS83323.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|184215173|gb|EDU12154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|217394237|gb|EEC34256.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225930917|gb|EEH26926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|235002538|gb|EEP51962.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia
           pseudomallei MSHR346]
 gi|242134554|gb|EES20957.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 383

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 139/374 (37%), Gaps = 22/374 (5%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P  + W++    PA H +  +    G+       ++       ++++      +MA+  
Sbjct: 23  NPHVDEWEEAGIFPA-HEVFGKLGALGMLGLSKPAAYGGGGLDYSYEL------VMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +  +  +          AP         +G++E   
Sbjct: 76  GVCAAGGVPLAIGVQTNMATPALARFGSDAL-----RDEFLAPAIAGRQVSCIGVSEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A+I +  ++  D         W  +   +D    LA             ++     
Sbjct: 131 GSDVASIRTSARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRNKSLIVVPLKS 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  ++   KIG  S+ T ++ F +       L+G+                L  A  +
Sbjct: 191 KGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQEERLYGAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +  S+ E I Y R R + G  ++D  V+   +A++  ++ A  AL++R    + +  
Sbjct: 251 LVVLDRSIDETIDYTRARKIFGRPVLDHQVVHYRLAELKTEVEALRALTYRATELYVQGG 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                      +A + K    ++A  V    ++  GG G+  E SI+R YR++   SI  
Sbjct: 311 D-------VTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGG 363

Query: 445 GSGNAMVLDVLNLL 458
           G+   M+  +   L
Sbjct: 364 GADEVMLGIICKKL 377


>gi|85373025|ref|YP_457087.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84786108|gb|ABC62290.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 371

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 128/361 (35%), Gaps = 28/361 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P            G   +     +  +       +        + L+       +   A 
Sbjct: 29  PLMQKWTSELAAFGHISAPHREEWGGLDMGWLTHLLIFEEIAYSSLDVAIPGFINAVGAE 88

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +P + + + P + + E             + + +G++E   G+D+AA+ ++  +
Sbjct: 89  LIRRSASPEIQQRYLPGLVAGE-------------LFVSMGISEPDVGSDVAAVRTRAIR 135

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  S   SD  I   +     G   +  +L D + +    + ++ K+ 
Sbjct: 136 DGDYWVINGEKTWITSGAYSDLLICTCRT----GEKEISHILVDRAESPYEVRDIE-KMA 190

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
               +T ++  ++        L     G    +K+        A+ S+   R +L EAI 
Sbjct: 191 LNGQSTAQIFLTDCRVPASNMLGQPGDGLRNTLKVFEIARCHMAMWSIGIARRALDEAIA 250

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y++ R   G  L    ++   +A +A  I AA  L+ R  +  D       E A A+   
Sbjct: 251 YSKERSQHGRKLAGHQLIADKLATMATRIDAARLLAHRAISLVDADVRAEAECAMAKW-- 308

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                +  +MA  V  +A++  GG+G   E  + R  RE+    I  G+     L V   
Sbjct: 309 -----YATEMAIGVTRDALQIHGGNGVTREFIVERLVREAIICPIPDGTTEIQKLIVSRA 363

Query: 458 L 458
           L
Sbjct: 364 L 364


>gi|327439890|dbj|BAK16255.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 388

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 120/371 (32%), Gaps = 35/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +          +  A      +L    +      SA  + 
Sbjct: 48  KELREKAKAIGFWGINTPEEYGGANLGPIMSVLIAM-----ELGRTFVPFNFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +      + +               P           LTE   G+D   I  +  K  D
Sbjct: 103 YLGNEEQKQKYLI-------------PTINGERRSCFALTEPDAGSDARGIQMRAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGN 281
             + L+G K F+++   +D  ++ A  +   G    V   L D    G   + +   +G 
Sbjct: 150 H-WVLNGEKVFITNGNEADFAMVFAVTDKEKGANGGVTCFLVDKEM-GWKSEYIYT-MGE 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHY 338
              AT  L F N        L             I          ++      L  AI Y
Sbjct: 207 WGPAT--LVFDNVRVPEENILGELGQGFNLGMQWIGQGRYMIPAGAIGAAERLLQMAIDY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  + ++  ++  IAD A++I AA  + FR A   +       +++ A++   
Sbjct: 265 SKTRVTFGKPIAERQAIQWMIADSAVEIEAAKWIVFRAAWMAENGMDPRHQSSMAKLNGA 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I       MA  V+   ++  GG GY +E  I R YRE     I  G+       +   L
Sbjct: 325 I-------MANQVVDRVLQIHGGMGYTKELPIERWYRELRLYRIFEGTDEIQRRTIARNL 377

Query: 459 EKGTNLFEQLF 469
            KG     +L 
Sbjct: 378 LKGHAKVGELL 388


>gi|118085838|ref|XP_418663.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 410

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 138/379 (36%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ I  A      
Sbjct: 47  KEINPFVDKWEEEGQFPA-HKVFKTLGQAGFLGVDKPTEYGGMGLDFSYSIAVAE----- 100

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G +    +  A  V A M TP +      +  S E       P     +   LG++
Sbjct: 101 --ELGSIRCGGIPMAIGVQAGMATPAL-----TRFGSDELKKQFLTPTISGDLVACLGIS 153

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I +   +  D      G  W  S   +D   +LA             +  
Sbjct: 154 EAGAGSDVASIKTTAVRKGDEYVINGGKMWTTSGCQADWMCLLANTSEGHPHQNKSLICL 213

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
             +  G+   +  +K+G RS+ T ++ F +       L+G+  +             L  
Sbjct: 214 PMNLPGIHITKKIDKLGMRSSDTAQIFFEDVRVPSKNLIGEEGMGFTYQMLQFQEERLWG 273

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               ++ +   + E I Y R+R      ++   V+   +A++A ++    +L +R    +
Sbjct: 274 VATVLTPLETIIQETIDYTRQRKAFDQSVLQNQVVHFRLAELATEVELLRSLLYRTIALY 333

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            E    ++        A + K    ++A  V    ++  GG G+  E  ++R YR+    
Sbjct: 334 VEGNDVTK-------FASMAKLKAGRLAREVTDSCLQFWGGMGFTSEVLVSRFYRDLRLV 386

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+   M+  +   +E
Sbjct: 387 SIGGGTDETMLSIICKYME 405


>gi|13541501|ref|NP_111189.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 417

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 131/372 (35%), Gaps = 23/372 (6%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +    P     +     +G+    + + +         +  A             + S  
Sbjct: 32  EEVTFP--REFIDFITKNGVVGLRFPKEYGGKGASWVAEASAVEEMGYLGFTLSCMYSLG 89

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAI 214
                 +    T    + +   I S               +     +TE  GG+D+   +
Sbjct: 90  TIVGEPMYRYGTNEQKEKYLKGITSG-------------KLYGAEAITEPSGGSDLFGMM 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLC 271
            +   K  +  Y L+G K F+     +D F+  A  +         +   + D    GL 
Sbjct: 137 KTTAVKKGN-KYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGISAFIVDRDTPGLK 195

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            + L   +GN+   T  + + +       L+G+LN        M I   L +A  S+   
Sbjct: 196 VETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFNRMMIPERLTTAAGSLGVS 255

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L  A  YA +R   G  LI+   +   +A+    + +A+AL +  A + D  +    
Sbjct: 256 TAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSASALVYTAAKAADLYEKGQT 315

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             +YAR +  + K    +    ++ +AM+ +GG GY     I R  R+S    I  GS  
Sbjct: 316 TQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPIERLLRDSRLGLIWTGSSE 375

Query: 449 AMVLDVLNLLEK 460
            M + + +   K
Sbjct: 376 VMKMIIQHEYLK 387


>gi|167033187|ref|YP_001668418.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166859675|gb|ABY98082.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1]
          Length = 386

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 114/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S +++    +      WA  +F             
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALIERELS---KVSWALHVFVARPSKILMACKD 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  AI ++  +  D         +   +  +D
Sbjct: 104 EQINDYLLPCVQGEKTDCFALTEPGAGSDANAIKTRAVRQGDDFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V  LL D    G+  +R    + NR   T EL F +    
Sbjct: 164 FAIVFAVTDTYEHNGRKRNAVTALLVDRGTPGMTIRRGPKCVSNRGYHTYELFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLQWAADRKQFGQAIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A   D+        +     A + K +  ++   V  E
Sbjct: 284 VSFKLADMATQIRAAEMLTLHTAWKMDQG-------SMTDGEAGMAKLFASEVLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       +   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIIARELLR 382


>gi|319948736|ref|ZP_08022857.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319437638|gb|EFV92637.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 400

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 23/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R +   GL    +              I      ++ +      +S  V ++    
Sbjct: 55  RDLHRAAGDLGLLGVSFPEEVGGGGGDMRDSI------IVCEALHEAGVSGGVFASLFTC 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + TP + +   P    R   PT         +   L +TE  GG+D+  +T+  ++  D
Sbjct: 109 GIATPHLAQSGRPDQIDRWVRPTL-----AGDMIGSLAITEPGGGSDVGHLTTTARRDGD 163

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                    +  S   +D  +   +  G    G   V  L+      G        K+G 
Sbjct: 164 HFVVNGAKTYITSGTRADFVVTAVRTGGEDLPGASGVSLLVIPTDTPGFHRSAPLEKLGW 223

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R++ T EL F++       L+G  N     +    +   +  A    S  +  L   + +
Sbjct: 224 RASDTAELTFTDCRVPVENLVGAENEGFAQIAIGFVGERIALAAQGYSHAQRCLDLTLAW 283

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  L+ +  ++  + ++A  I  A   + R A+          E  +A+  A 
Sbjct: 284 VRERETFGRPLLSRQAVQNTVTEMARRIDVARTYTHRCADLAVAGHDAVAEVCFAKNTAV 343

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W       V  +A++  GG G++ E  ++R YR+     I  G+   +       L
Sbjct: 344 ECAEW-------VANQAVQLFGGLGFMAESEVSRQYRDVRLLGIGGGTTEILTTLAGRRL 396


>gi|291295480|ref|YP_003506878.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470439|gb|ADD27858.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 581

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/413 (19%), Positives = 150/413 (36%), Gaps = 40/413 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LLR++   GL        +  +   +      A         +      +      +   
Sbjct: 65  LLRKAGELGLLGVEVGEEYGGLDLPKTVSTVIAEALAGTGGFSVTYGVQTSIGLLPLVYW 124

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      +  K+ S E             +     LTE + G+D     ++ +  +DG 
Sbjct: 125 GTKEQKDKYLAKLVSGE-------------LIAAYCLTEPQSGSDAMGAKTRAELSADGK 171

Query: 226 Y--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y        W  ++  +  F + A+         +   L +    GL     + K+G ++
Sbjct: 172 YYILNGTKMWISNAGFAHLFTVFAKTPE-----GLTAFLVERDTPGLRLGGEEKKMGIKA 226

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +    +   LG+L        ++  +        ++ G + +LA +  YA+
Sbjct: 227 SSTRQVFLEDVKVPVENVLGELGKGHKIAFNVLNVGRYKLGAGAIGGAKGALALSAKYAQ 286

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-----KSRSEEAAYA-- 393
            R   G  +    ++++ +A++A  I A  +  +R     D+A     K+ + EA  A  
Sbjct: 287 ERVAFGKPIAQFGLIQQKLAEMAARIFAGESAVYRTMGMIDQALSNLDKANAAEAVLAGI 346

Query: 394 ---RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               I A I K    ++   V+ E ++  GG GY  E  I R YR+S  N I  G+    
Sbjct: 347 EEYAIEASIIKVLGSEVLDYVVDEGVQIHGGYGYSAEYEIERAYRDSRINRIFEGTNEIN 406

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            L +  +L     L   +   L   L  +  K+   L +      EDK LA+ 
Sbjct: 407 RLLIPGML-----LRRAMKGEL--PLFDAAMKLQKELLEPSFEEPEDKELAQL 452


>gi|293608004|ref|ZP_06690307.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828577|gb|EFF86939.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 607

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 95/519 (18%), Positives = 180/519 (34%), Gaps = 87/519 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       L A          
Sbjct: 71  ERVTVNPEVGVALKAFADAGLMSAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P   K +   +   +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGEPEKVKPYVNAMIEGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++  K  DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 178 RTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVP 237

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D +      N +    + +K+G R      L F              G L+G+   
Sbjct: 238 RKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              LI  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRVQ-GRSRSERNPSSPQIPLIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      ++ A AL    A   D+      A+ R +      ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQAHQLLDLLTPVVKSWSSE 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L    +      
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLS 476

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALAS 512
              L E++ +T+ Q       K    L+D      +   L R +TEK        + LA+
Sbjct: 477 MKLLHEKIMNTIAQA------KAQPSLKDHADQLDQKWQLIRNVTEKLHALTDVELQLAN 530

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +A  L   G   +  ++L     D     H ++    + 
Sbjct: 531 AANYLEAFGHLVVGWLWL-----DQAVVIHKLMPNSTDP 564


>gi|148547260|ref|YP_001267362.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148511318|gb|ABQ78178.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 386

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 114/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S +++    +      WA  +F             
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALIERELS---KVSWALHVFVARPSKILMACKD 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  AI ++  +  D         +   +  +D
Sbjct: 104 EQINDYLLPCVQGEKTDCFALTEPGAGSDANAIKTRAVRQGDDFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V  LL D    G+  +R    + NR   T EL F +    
Sbjct: 164 FAIVFAVTDTYEHNGRKRNAVTALLVDRGTPGMTIRRGPKCVSNRGYHTYELFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLQWAADRKQFGQAIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A   D+      EA  A       K +  ++   V  E
Sbjct: 284 VSFKLADMATQIRAAEMLTLHTAWKMDQGNMTDGEAGMA-------KLFASEVLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       +   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIIARELLR 382


>gi|319951694|ref|YP_004162961.1| butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319420354|gb|ADV47463.1| Butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 599

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 137/374 (36%), Gaps = 33/374 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
             +R++   GL       S+  +       +        A               +M + 
Sbjct: 64  ETMRKAGELGLLSVAVPESYGGMGMGFVSTMLVCDYISGATGSFSTAFGAHTGIGTMPIT 123

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + PK+ S E+                  LTE   G+D  +  ++     D
Sbjct: 124 LYGTEEQKQKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 170

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y +SG K ++S+      FI+ A++       +   ++E+   NG+     + K+G 
Sbjct: 171 GKHYSISGQKMWISNAGFCSVFIVFARIGDDK--NITGFIVENDPSNGISLGDEEKKLGI 228

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ F+ T   +   L +   G    M  L    +  A   +   R  + EA  Y
Sbjct: 229 HSSSTRQVFFNETKVPVENMLSDRGNGFKIAMNALNVGRIKLAAACLDAQRRVIGEATKY 288

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA- 397
           A  R      +I+   +K  IA++  ++ A  + ++R A + ++  +  E A  +   A 
Sbjct: 289 ANERIQFKTPIINFGAIKAKIANMVTNVYADESAAYRAAKNIEDRIAMREAAGNSHQEAE 348

Query: 398 -----------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                       I K    +   +   E ++  GG G+  +  +   +R+S    I  G+
Sbjct: 349 LKGVEEYAIECSILKVAVSEDCQSTTDEGIQIFGGMGFSADTPMESAWRDSRIARIYEGT 408

Query: 447 GNAMVLDVLNLLEK 460
                +  + +L K
Sbjct: 409 NEINRMLAVGMLVK 422


>gi|302522087|ref|ZP_07274429.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
 gi|302430982|gb|EFL02798.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
          Length = 606

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 102/552 (18%), Positives = 190/552 (34%), Gaps = 80/552 (14%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPA 102
             A +        + + E   +  A+  A   ++ + + P            ++V   P 
Sbjct: 34  ARARYAEHDRATFDAVLELSETLAARHFAPHNKLGDAHEPTFDG--------ERVHVIPE 85

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               L+     GL  +  D S   +   +         +  A +        ++ +A+++
Sbjct: 86  VGEALKVFAEAGLTSAGLDASVGGMQLPRVVTDACFAWFQAANVGTSAYPFLTIGNANLL 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                            SRE   T   PM +      + L+E + G+ +A + ++ +   
Sbjct: 146 LAHG-------------SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAG 192

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPRLLEDGS----- 266
           DG   L G+K ++S    +       ++LA+  G          F+VP+ L DG      
Sbjct: 193 DGTCRLFGNKMWISGGDHELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGA 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILI 316
            N +    L +K+G R      L F              G+L+G+ N     +  M    
Sbjct: 253 RNDVVLAGLNHKMGYRGTTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEA 312

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +   + + +        A+ YAR R                 +I+   ++R +      
Sbjct: 313 RIGVGLGATALGYTGYLHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAY 372

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  A AL+       D+ ++  E AA         I+ PI K W  +      + A++  
Sbjct: 373 VEGALALTLYCGRLVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVH 432

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ--- 474
           GG GY  E  + + YR++  N I  G+     LD+L    + K       L   +E    
Sbjct: 433 GGYGYTREYDVEQFYRDNRLNPIHEGTHGIHGLDLLGRKAVMKDGAALRLLLGRVEDTAR 492

Query: 475 ---DLGSSGKKVITILRDSISLCKEDKGLARFLTE---KIALASSAAALYRAGMNDIADV 528
                G       T LR++ +        AR   +   + ALA+++  L  AG   +A +
Sbjct: 493 RATSAGGDAATYATSLREAATRLGTV--TARLWQDGDPRTALANASVYLEAAGHVVLAWI 550

Query: 529 FLENRFLDNCHS 540
           +LE         
Sbjct: 551 WLEQLLAAGAGE 562


>gi|53725603|ref|YP_103644.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|67643911|ref|ZP_00442654.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
 gi|121600521|ref|YP_992186.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385346|ref|YP_001028631.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126449936|ref|YP_001081467.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|126453011|ref|YP_001067460.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|134280085|ref|ZP_01766796.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|166998257|ref|ZP_02264117.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
 gi|167817165|ref|ZP_02448845.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 91]
 gi|167825577|ref|ZP_02457048.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 9]
 gi|167895645|ref|ZP_02483047.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           7894]
 gi|167904038|ref|ZP_02491243.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei NCTC
           13177]
 gi|167912294|ref|ZP_02499385.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 gi|167920253|ref|ZP_02507344.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           BCC215]
 gi|217420906|ref|ZP_03452411.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|226194177|ref|ZP_03789776.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237813587|ref|YP_002898038.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
           MSHR346]
 gi|242317700|ref|ZP_04816716.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|254175546|ref|ZP_04882206.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|254180842|ref|ZP_04887440.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|254191681|ref|ZP_04898184.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254202338|ref|ZP_04908701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|254207672|ref|ZP_04914022.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|254356425|ref|ZP_04972701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
           2002721280]
 gi|52429026|gb|AAU49619.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344]
 gi|121229331|gb|ABM51849.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124293366|gb|ABN02635.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126226653|gb|ABN90193.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|126242806|gb|ABO05899.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|134248092|gb|EBA48175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|147746585|gb|EDK53662.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH]
 gi|147751566|gb|EDK58633.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU]
 gi|148025422|gb|EDK83576.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei
           2002721280]
 gi|157939352|gb|EDO95022.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696590|gb|EDP86560.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|184211381|gb|EDU08424.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|217396318|gb|EEC36335.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|225933642|gb|EEH29630.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504311|gb|ACQ96629.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei
           MSHR346]
 gi|238525376|gb|EEP88804.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4]
 gi|242140939|gb|EES27341.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|243065337|gb|EES47523.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20]
          Length = 395

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|254822566|ref|ZP_05227567.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 403

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 131/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+       ++ EP        +           
Sbjct: 28  PAAAEWDEREETP--WPVIQEAAKVGLYSPDLFAQQAAEPTGLG---MLTVFEELFWGDA 82

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +  +A+ +A   TP     W P++F    +P                 +E  
Sbjct: 83  GIALSIMGTGLAAAALAGNGTPEQLGRWLPEMFGTADEP----------KLGAFCSSEPD 132

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+ AI ++ +               W  +  +++  I++A V   +G       +  
Sbjct: 133 AGSDVGAIRTRARYDEATSEWVLNGTKTWATNGGIANVHIVVASVYPELGTRGQATFVIP 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------------STGPV 309
               GL   +   K G R++ T E+   +        L                 S    
Sbjct: 193 AGVKGLAQGQKFKKHGIRASHTAEVVLDDVRLPEDHILGGREKFEARIARVKSGASARGQ 252

Query: 310 EDMKILIYLD--SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             MK           M+V   R +   A+ YA +R   G  + +   +   +AD+   I 
Sbjct: 253 AAMKTFERTRPTVGAMAVGVARAAYEYALDYACQREQFGRKIGEFQAVAFKLADMKCRID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        +      ++      + K    + A  V  EA++ +GG+GY  +
Sbjct: 313 AARLLVWRAGWMARNNQ------SFDSAEGSMAKLVASETAVYVTDEAIQILGGNGYTRD 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L V   L
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVVSRAL 397


>gi|116255587|ref|YP_771420.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260235|emb|CAK03339.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 395

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 126/358 (35%), Gaps = 29/358 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  EIFREMGELGLLGPTISPDYGGAGLGYVAYGLIAREVEKVDSGYRSMMSVQSSLVMVPIE 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSQAQKLKYLPKLATGEW-------------IGCFGLTEPDHGSDPGSMATRAKKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T E+     F     LL D+    GP   +        A  ++       A A  Y  
Sbjct: 218 SITGEVVMDGVFVPEENLLPDVTGLKGPFTCL-NSARFGIAWGALGAAEDCYARARQYTL 276

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+A +I+       RL    +E     E       +  I 
Sbjct: 277 ERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSIL 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 330 KRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAI 387


>gi|91780345|ref|YP_555552.1| long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693005|gb|ABE36202.1| Long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 380

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 137/359 (38%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               R++   G  C   D     +  K   ++       +            S   A  +
Sbjct: 40  REAFRKAGEMGYLCMWIDECHGGLGLKDLRYEQILIEENIFHGDRGFFFWLHSRLVAPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + P I S E               + + +TE   G+D+A + ++ ++  
Sbjct: 100 EHFGTDEQKQRYFPGIRSGEQ-------------ILAIAMTEPDAGSDLAGMKTRAEETG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D  + L+G K ++S+ ++   +++A          +   L +    G    R   K+G +
Sbjct: 147 D-YWVLNGSKTYISNGLNADVVLVAARTHPTKAHGLTLFLVERGMEGFERGRNLRKMGLK 205

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S  T EL F +       +LG ++     +        L +AI +V+  R+++     + 
Sbjct: 206 SQDTAELFFHDVKIPKSHVLGQVHAGFQHLMRGLAEERLLAAIFNVASARLAMHLTCDFV 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V G  L      +  +A +  +I  A +   RL    +  +  + +AA A      
Sbjct: 266 RERKVFGKPLSSFQNTRFKLAALDTEIEVAQSWVDRLVAEHNADQLDAVDAARA------ 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +  ++   ++ E ++  GG+GY++E  I R Y++   + IL G+   M   V   +
Sbjct: 320 -KLFTSELNGRMVDEGVQQHGGAGYMDEYEICRLYQDERIHRILAGTSEIMKEIVARSI 377


>gi|172059771|ref|YP_001807423.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171992288|gb|ACB63207.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 395

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 129/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +             AR           +MS  S      + 
Sbjct: 53  EIFREMGEIGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D   + ++ +K+  
Sbjct: 113 EFGSDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGGMVTRAKKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++E   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGAKMWITNSPIADVFVVWAKLE-EDGKDAIRGFILEKGWKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEVFVP---EENLLPNVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  +  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKSLDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|126732493|ref|ZP_01748292.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707132|gb|EBA06199.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 410

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 129/359 (35%), Gaps = 34/359 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +  +     ++ + A  +  +       +   S      +    +    +
Sbjct: 78  GLLGVTVPEEYGGLGSSYVSYGLIAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRR 137

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ + E+                 GLTE   G+D A + ++  K   G        
Sbjct: 138 KYLPKLATGEW-------------IGCFGLTEPDAGSDPAGMKTRAVKTEGGYRLNGSKM 184

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +SP++D F++ A+ E   G   +   + +    GL   +++NK+  R++ T E+   
Sbjct: 185 WISNSPIADVFVVWAKSEAHDGK--IRGFVLEKGAKGLTAPKIENKLSLRASVTGEVVLD 242

Query: 293 NTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSG 346
           N         +     V+ +K     L+ A   +S   +  AEA  +A R     R    
Sbjct: 243 NVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGVLGAAEACWHAARAYGLDRKQFD 298

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    + ++ +AD+  +IA       R+    DEA+        A  M  I K   C 
Sbjct: 299 KPIAGTQLFQKKLADMQTEIAFGLQGCLRVGRLMDEARG-------APEMISILKRNNCG 351

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A  +   A +  GG+G   E  + RH       +   G+ +   L +L   + G   F
Sbjct: 352 KALEIARMARDMHGGNGISAEFQVIRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 409


>gi|85710663|ref|ZP_01041727.1| putative acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85687841|gb|EAQ27846.1| putative acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 380

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 128/378 (33%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+     PA   L ++    G         F       ++ +  A      
Sbjct: 20  REINPHVDAWEDEGIFPA-KELFKKMGDAGFLGINMPEEFGGAGLDYSYGLVFAETVGTI 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   +  +   +A      V + +     S +Y                LG+
Sbjct: 79  NCGALPMAIGVQTDMATPALARFGNDDVRERFLRPSISGDY-------------VACLGV 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRL 261
           +E   G+D++ I +  +K  D         W  +   +D   +LA  +   G       +
Sbjct: 126 SEPSAGSDVSGIRTTARKDGDDYIINGTKMWTTNGTQADWMCLLAITDPEGGVHHNKSLI 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
                  G+       K+G  S+ T ++ F +       L+G+             +  L
Sbjct: 186 CVPMDTPGISTAPRFKKLGMHSSDTTQVFFEDVRVPQANLIGEEGKGFAYQMSQFQIERL 245

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +    +  M   +A    YA  R + G  +ID   +   +A++  ++    +L++R A 
Sbjct: 246 WAGAAGLRSMENLIAATREYAAGRKLFGQSVIDFQSVAFRLAELETEVELLRSLTYRAAE 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +  +        +A + K    +++  V    ++  GG GY+ +  +AR YR+S 
Sbjct: 306 LHIAGEDVTR-------LATMVKLKAGRLSREVSDACLQYWGGMGYMWDSPVARSYRDSR 358

Query: 439 ANSILLGSGNAMVLDVLN 456
             SI  G+   M+  +  
Sbjct: 359 LGSIGGGADEVMLQILSR 376


>gi|327189524|gb|EGE56679.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 395

 Score =  229 bits (583), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 129/360 (35%), Gaps = 33/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A+ R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 55  AIFREMGELGLLGPTISPEYGGAGLGYTAYGLIAREVERVDSGYRSMMSVQSSLVMVPID 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 115 TFGSEAQKLKYLPKLAAGEW-------------IGCFGLTEPDHGSDPGSMATRARKVDG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E      L+   + +    GL    +  K+G R+
Sbjct: 162 GYSLSGSKTWISNAPIADIFVVWAKTEDN----LIRGFILEKGWKGLSAPAIHGKVGLRA 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+     F     + N+  G          L+SA   ++   +  AE     A  Y
Sbjct: 218 SITGEVVMDGVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+A +I+       RL    +E     E       +  
Sbjct: 275 TLERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 328 ILKRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAI 387


>gi|325675428|ref|ZP_08155112.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553399|gb|EGD23077.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 387

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 142/404 (35%), Gaps = 43/404 (10%)

Query: 68  CTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              Q+LA+       N   P    +             P  +A++      GL    +  
Sbjct: 12  DEYQQLAKTVRDFAQNVVAPVSAEHDAN-------HTFP--YAVVDGMADMGLFGLPFPE 62

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  +    L  + Q  A  L +     A  V         ++W P++ S 
Sbjct: 63  EYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPVYRFGNEEQKQEWLPQLTSG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D     ++ + + DG + ++G+K F+++  +D
Sbjct: 123 -------------KALAAFGLTEPGAGSDAGGTRTKAELV-DGEWVINGNKQFITNSGTD 168

Query: 242 A---FIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                 + A       G   +  +L   S  G   +   +K+G  ++ T  L F +    
Sbjct: 169 ITKLVTVTAVTGTKENGRKEISTILVPTSTPGFTAEPAYDKVGWNASDTHPLTFQDVRVP 228

Query: 298 LLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L     G    ++IL    +  A ++V   +  + E++ YA+ R   G  +     
Sbjct: 229 EANLLGERGRGYANFLRILDEGRIAIAALAVGAAQGCVDESVRYAKEREAFGRPIGANQA 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +      A A  +  A      K   ++       A I K    + A     +
Sbjct: 289 IEFKIARMEARAHTARAAYYDAAALMLSGKPFKKQ-------ASIAKLVASEAAMDNARD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A +  GG G++ E  +ARHYR+S    I  G+    ++ +   L
Sbjct: 342 ATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIAREL 385


>gi|48478261|ref|YP_023967.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48430909|gb|AAT43774.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 372

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 145/376 (38%), Gaps = 37/376 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ++ D+ ++ P    L ++    G         +        +  +A     ++       
Sbjct: 23  KKIDEDDYFPV--DLFKKLGRQGYLGVTIPEEYNGTNL--GYMAQAIIEEEISYCSGSIG 78

Query: 152 MSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           +S    S   +       +  + +++  K+ S +                 LG+TE   G
Sbjct: 79  LSYGAHSNLCLDNLFRNGSNYIRENYVTKLASGDM-------------IGSLGMTEPSAG 125

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           TD  ++ ++  ++ DG Y ++G K F+++ P +D F+  A+    +  FL+       S 
Sbjct: 126 TDALSMKTRADEM-DGKYRINGSKTFITNAPFADVFLTYARTGDDISAFLILA-----SD 179

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +   K+G R + T E+ F++       ++G +N     +     +     A  S
Sbjct: 180 AGFSRGKSFKKLGMRGSPTGEIYFNDIIIGSDRIIGGINHGKNVMFSGLNMERAILAFNS 239

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +   A+ Y+  R   G  + +  +++  +A +   +  +   ++    +  + +
Sbjct: 240 IGISRRAFDLAMEYSMEREQFGKPIHEFELIQEKLAYMYTKLETSRLFAYHALENVQKDR 299

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S +AA        +  +  + +  +  EA++  GG GYI++  I R  R+S   SI  
Sbjct: 300 MNSLDAA-------ASILYASETSEYIAREALQIFGGYGYIKDFEIERLMRDSILLSIGA 352

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       +   L +
Sbjct: 353 GTNEIRKKLIAEALVR 368


>gi|307545016|ref|YP_003897495.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
 gi|307217040|emb|CBV42310.1| glutaryl-CoA dehydrogenase [Halomonas elongata DSM 2581]
          Length = 393

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 150/424 (35%), Gaps = 47/424 (11%)

Query: 51  PSVVHKELELLGEYVLSCTA-QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           P        L+ +        Q+ AR  +Y   +L        R ++ +       ++  
Sbjct: 6   PVTWDDPFRLIDQLDGEERLVQQTAR--DYCQDKLLPRVLEANRHERFD-----REIMTE 58

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
               GL  +  D      +   ++ + A  +  +       +   S      +    +  
Sbjct: 59  MGELGLLGATIDGYGCAGMNYVSYGLIAREVERVDSGYRSAMSVQSSLVMYPIHAFGSEA 118

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               + P++ S E+                 GLTE   G+D  +++++  +  +G     
Sbjct: 119 QKDRYLPRLASGEW-------------VGAFGLTEPDHGSDPGSMSTRATRTENGWRLNG 165

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +SP++D F++ A+ +      LV   + +   +GL   +++ K   R++ T ++
Sbjct: 166 TKTWITNSPIADVFVIWARDDEG----LVRGFILERGMDGLSAPKIEGKFSLRASVTGQI 221

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----R 341
              +        L D+    GP         L+ A   ++   +  AEA  +A       
Sbjct: 222 AMQDVEVDDAQRLPDVTGLKGP------FSCLNRARYGIAWGSMGAAEACWHAARDYTLE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +IA     + R     DE +           +  + K
Sbjct: 276 RKQFGRPLAANQLIQKKLADMQTEIALGLQAALRAGRMIDEGQ-------LVPEVISLIK 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +  +A +  GG+G  +E  + RH     A +   G+ +   L +L   + G
Sbjct: 329 RNNCGKALDIARQARDMHGGNGISDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTG 387

Query: 462 TNLF 465
              F
Sbjct: 388 LQAF 391


>gi|254503377|ref|ZP_05115528.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439448|gb|EEE46127.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 428

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 128/369 (34%), Gaps = 34/369 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL        +        A+ + A  +  +       +   S      +
Sbjct: 86  REIFNEMGELGLLGVTLPEEYGGSGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPI 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + PK+ S EY                 GLTE   G+D A + ++ +KI 
Sbjct: 146 YAYGSEEQRNKYLPKLSSGEY-------------VGCFGLTEPDAGSDPAGMRTRAEKID 192

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+ E   G   +   + +    GL   ++  K+  R
Sbjct: 193 GGYKLTGSKMWISNSPIADVFVVWAKSEAHDGA--IRGFVLEKGMKGLSAPKVGGKLSLR 250

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           ++ T E+   N               V  +K     L+ A   +S   +  AE     A 
Sbjct: 251 ASITGEIVMDNVEV----GEGALLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCWTRAR 306

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  L    + ++ +AD+  +IA     + R+   FD  +        A  M
Sbjct: 307 QYGLDREQFGRPLAQTQLFQKKLADMQTEIALGLQAALRVGQLFDAGQ-------MAPEM 359

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K   C  A  +  +A +  GG+G  EE  + RH +     +   G+ +   L +L 
Sbjct: 360 ISIVKRNNCGKALDIARQARDMHGGNGISEEYHVMRHAQNLETVNTYEGTHDVHAL-ILG 418

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 419 RAQTGLQAF 427


>gi|300692218|ref|YP_003753213.1| dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299079278|emb|CBJ51950.1| dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 397

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 131/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     G+        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGALGMLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 114 AFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPDHGSDPASMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLSGAKMWITNSPIADVFLVWAKLPDDNGEDQIRGFILERGWKGLSAPAIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 221 SITGEIVLDEVFVP---EENLMPGVHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 278 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGIQAF 396


>gi|312140934|ref|YP_004008270.1| acyl-CoA dehydrogenase/2-methylacyl-CoA dehydrogenase [Rhodococcus
           equi 103S]
 gi|311890273|emb|CBH49591.1| acyl-CoA dehydrogenase/2-methylacyl-CoA dehydrogenase [Rhodococcus
           equi 103S]
          Length = 387

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 142/404 (35%), Gaps = 43/404 (10%)

Query: 68  CTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              Q+LA+       N   P    +             P  +A++      GL    +  
Sbjct: 12  DEYQQLAKTVRDFAQNVVAPVSAEHDAN-------HTFP--YAVVDGMADMGLFGLPFPE 62

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A  +    L  + Q  A  L +     A  V         ++W P++ S 
Sbjct: 63  EYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPVYRFGNEEQKQEWLPQLTSG 122

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D     ++ + + DG + ++G+K F+++  +D
Sbjct: 123 -------------KALAAFGLTEPGAGSDAGGTRTKAELV-DGEWVINGNKQFITNSGTD 168

Query: 242 A---FIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                 + A       G   +  +L   S  G   +   +K+G  ++ T  L F +    
Sbjct: 169 ITKLVTVTAVTGTKDNGRKEISTILVSTSTPGFTAEPAYDKVGWNASDTHPLTFQDVRVP 228

Query: 298 LLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L     G    ++IL    +  A ++V   +  + E++ YA+ R   G  +     
Sbjct: 229 ETNLLGERGRGYANFLRILDEGRIAIAALAVGAAQGCVDESVRYAKEREAFGRPIGANQA 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IA +      A A  +  A      K   ++       A I K    + A     +
Sbjct: 289 IEFKIARMEARAHTARAAYYDAAALMLSGKPFKKQ-------ASIAKLVASEAAMDNARD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A +  GG G++ E  +ARHYR+S    I  G+    ++ +   L
Sbjct: 342 ATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIAREL 385


>gi|126643026|ref|YP_001086010.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 342

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 125/350 (35%), Gaps = 23/350 (6%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHK 172
           GL           +    ++ +  A        E G      V  A  V   M TP + +
Sbjct: 5   GLLGICKPEENGGLALDYSYNLVVAE-------EIGRAACGGVPLAIGVQTDMATPALAR 57

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
                  S+E       P         + ++E   G+D+AAI +  +K  D         
Sbjct: 58  FG-----SKELRDEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKM 112

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +S  +D F +LA             ++      G+ +    NK+G RS  T ++   
Sbjct: 113 WITNSLQADFFCLLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLD 172

Query: 293 NTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N        + V                L +   ++ G+   + + I Y + R   G  L
Sbjct: 173 NVRVPQRNLVGVEGMGFMMQMMQFQEERLWACANAIGGLENLIQKTIAYTKERTTFGQPL 232

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+   +    A++  ++ A  AL+++        +  ++       +A + K    +++ 
Sbjct: 233 INNQYIHFRFAELMTEVEALKALTYQACEQHIAGEDVTK-------LASMAKLKAGRLSR 285

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            V    ++  GG+G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 286 EVADSCLQYWGGNGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 335


>gi|213511174|ref|NP_001135191.1| isovaleryl-CoA dehydrogenase, mitochondrial [Salmo salar]
 gi|209151757|gb|ACI33082.1| Probable isovaleryl-CoA dehydrogenase [Salmo salar]
          Length = 432

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 135/379 (35%), Gaps = 24/379 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W+     PA H + +   + G         +  +    ++ I  +      
Sbjct: 65  QDINPYVDQWEAEGIFPA-HKVFKLLGNAGFLGVNKPVEYGGLGLDFSYSIAVSE----- 118

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G++    +  A  V   M TP + +       S E       P         LG++
Sbjct: 119 --ELGNIRCGGIPMAIGVQTDMATPALARFG-----STELKKEFLLPSIMGDKVACLGVS 171

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A I +   +  D      G  W  +   +D   +LA             +  
Sbjct: 172 EVGAGSDVATIKTNAVREGDEYVVNGGKMWTTNGTQADWMCLLANTSNGPSHKNKSLICL 231

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
             +  G+   R  +K+G RS+ T E+ F +        +     G    M       L +
Sbjct: 232 PMNSPGVHIARKIDKMGMRSSDTAEVFFDDVRVPCKNLIGQEGMGFTYQMLQFQEERLWA 291

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               ++ M   + E I Y R+R +    ++    +   +A++  +I    +L  R    +
Sbjct: 292 CGNILTMMDNIIQETIQYTRQRKIFKMPVLYHQSVHFRLAELETEIELLRSLLHRSTALY 351

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +    ++       +A + K    +++  V    ++  GG G+  +  ++R YR++   
Sbjct: 352 IKGNDVTK-------LASMAKLKAGRLSREVGDSCLQYWGGMGFTSDVLVSRFYRDARLL 404

Query: 441 SILLGSGNAMVLDVLNLLE 459
           SI  G+   M+  +   ++
Sbjct: 405 SIGGGADEVMLSIICKYMD 423


>gi|115903636|ref|XP_795791.2| PREDICTED: similar to acyl-coa dehydrogenase [Strongylocentrotus
           purpuratus]
 gi|115949121|ref|XP_001182807.1| PREDICTED: similar to acyl-coa dehydrogenase [Strongylocentrotus
           purpuratus]
          Length = 272

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 101/254 (39%), Gaps = 19/254 (7%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVG 254
               +TE   G+D+A I ++  +  D         W  +   +  + +LA+ +       
Sbjct: 9   QAYCVTEPGAGSDVAGIKTKAVRKGDDYVLNGSKMWITNGGHASWYFVLARTDLDPKASA 68

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
                  + +    G+   + +  +G R++ T  + F +    ++   NV  G  +  KI
Sbjct: 69  SRAFTGFIVERDTEGVTVGKKEWNMGQRASDTRAVNFEDV---VVPKENVLLGEGQGFKI 125

Query: 315 LI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +          A  +    + +L EA+ Y+  R   G  + +   +   +AD+A+ + A
Sbjct: 126 AMGAFDKTRPPVAAGATGLAKRALDEALKYSMERQTFGRTIANHQAVAFLLADMAVGVEA 185

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L+ R A   D+ +  +         A + K +   +A    ++A++  GG+G+  E 
Sbjct: 186 ARLLTHRSAWEIDQGRRNT-------YYASLAKCYAADVANKNASDAVQVFGGNGFNSEY 238

Query: 429 SIARHYRESPANSI 442
            + +  R++    +
Sbjct: 239 PVEKLMRDAKIFQV 252


>gi|14324885|dbj|BAB59811.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 420

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 131/372 (35%), Gaps = 23/372 (6%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +    P     +     +G+    + + +         +  A             + S  
Sbjct: 35  EEVTFP--REFIDFITKNGVVGLRFPKEYGGKGASWVAEASAVEEMGYLGFTLSCMYSLG 92

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAI 214
                 +    T    + +   I S               +     +TE  GG+D+   +
Sbjct: 93  TIVGEPMYRYGTNEQKEKYLKGITSG-------------KLYGAEAITEPSGGSDLFGMM 139

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLC 271
            +   K  +  Y L+G K F+     +D F+  A  +         +   + D    GL 
Sbjct: 140 KTTAVKKGN-KYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGISAFIVDRDTPGLK 198

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            + L   +GN+   T  + + +       L+G+LN        M I   L +A  S+   
Sbjct: 199 VETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFNRMMIPERLTTAAGSLGVS 258

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L  A  YA +R   G  LI+   +   +A+    + +A+AL +  A + D  +    
Sbjct: 259 TAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSASALVYTAAKAADLYEKGQT 318

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             +YAR +  + K    +    ++ +AM+ +GG GY     I R  R+S    I  GS  
Sbjct: 319 TQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPIERLLRDSRLGLIWTGSSE 378

Query: 449 AMVLDVLNLLEK 460
            M + + +   K
Sbjct: 379 VMKMIIQHEYLK 390


>gi|167744512|ref|ZP_02417286.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 14]
 gi|254299046|ref|ZP_04966496.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|157809078|gb|EDO86248.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           406e]
          Length = 395

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNAPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|329894362|ref|ZP_08270232.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328923158|gb|EGG30481.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 391

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 143/375 (38%), Gaps = 30/375 (8%)

Query: 104 HALLRRSIHDGLHCSIWDR----SFEPVVRKQAHKIRAARLYLMAQLEAGH--LMSPSVT 157
             + R +    L   I         +  V + A +   A+ +LM   +  +  +      
Sbjct: 10  QQMFRDAYRKFLAAEIVPHMESWRDQGRVDRSAFEAAGAQGFLMVWPDEAYGGMGDDDFR 69

Query: 158 SASMVALMTTPRVHKDWAPKIFSR------------EYDPTNKAPMQKTSVAIGLGLTEK 205
              ++   T      DW   + SR            E          +    + + +TE 
Sbjct: 70  FEQVIIEETAYARCGDWYNTLHSRLVGPYLTRFGNEEQRQRFLPKAVRGECIMAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLLED 264
             G+D+A + +   +  D  + L+G K ++S+ ++   + + A+ +       +   + +
Sbjct: 130 DAGSDLAGMRTTAVEHDDH-WVLNGSKTYISNGINADLVFVAAKTDPENNPHHMTIFMVE 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   K+G ++  T EL F++       +LG+       + +      L  A
Sbjct: 189 RGMGGFERGRNLKKMGLKAQDTAELFFNDVKIPKANVLGEAGRGFIYLMEGLAEERLIGA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +  ++  ++S      Y R+R V G  L      +  +A++  ++  A +   +   +F+
Sbjct: 249 VGYLAAAQLSWDLTYDYVRQRKVFGKALAAHQNTQFKMAEMRTELDLAQSYVDQCVAAFN 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  + +AA A+++         ++  +     ++  GG+GY++E  I+R + ++  + 
Sbjct: 309 AGQLSAVDAAKAKLVT-------SELQVSAADLGVQMHGGAGYMDEYPISRQFTDARISP 361

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+   M + +  
Sbjct: 362 IYAGTSEVMKIIISR 376


>gi|162455908|ref|YP_001618275.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161166490|emb|CAN97795.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 575

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 89/479 (18%), Positives = 165/479 (34%), Gaps = 56/479 (11%)

Query: 93  RWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGH 150
           R D+     P     ++R    GL           V        R    +  +    A  
Sbjct: 56  RIDREHAIDPGVLDEMKRL---GLMGLQIPSEHGGVNLSNMAYARVMQEIGGLDASIAVT 112

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L +        + L  T    + + PK+ + E+                  LTE   G+D
Sbjct: 113 LGAHQSIGFKAIQLFGTEEQKQRYLPKLATGEWM-------------AAFALTEPGAGSD 159

Query: 211 IAAITSQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
            AAI ++ +  +DG Y        W  +   +D F + A+     EG+     +   + +
Sbjct: 160 AAAIRTRAELSADGSYYTLNGSKIWITNGGFADVFTVFARTSALEEGKKPK--LTAFIVE 217

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323
            S  G+     + K+G R ++T EL F +         NV     +  K+ +  L++  +
Sbjct: 218 RSM-GVKSGPNEQKLGIRGSSTTELFFDDVKVP---RENVLGEVGKGFKVAVEVLNNGRL 273

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +S   V      +  A+   + R   G  + D  ++K  IA +     A  ++++  A+
Sbjct: 274 GLSAGCVGACNTLIRMALDRVQERRAFGRSIGDFGLIKDKIATMLAHTYALESITYLTAS 333

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D      S E+A  ++M   T ++       V+ E ++   G GY+EE    RH R++
Sbjct: 334 LVDAKVPDFSIESAICKVMGSETLWF-------VVNETLQIAAGIGYMEEYPYERHLRDA 386

Query: 438 PANSILLGSGNA----MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS- 492
             N I  G+       M L  ++   K      +      +  G      +   R  +  
Sbjct: 387 RINMIFEGTNEILRCFMALSGMSGPGKALADVAKAMREPIKGFGLLSDFALRKARSVLGR 446

Query: 493 --LCKEDKGLARFLTEKIALASSAAA-----LYRAGMNDIADVFLENRFLDNCHSTHCM 544
             + K    L+R         +  A      L + G       + + R  +     +CM
Sbjct: 447 ERMSKAHPLLSREAVIFEDCTAELATHSEDMLRKHGREIAEMQYAQRRIAEMAIDLYCM 505


>gi|26990432|ref|NP_745857.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida KT2440]
 gi|24985401|gb|AAN69321.1|AE016569_5 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 386

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 114/346 (32%), Gaps = 28/346 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF-----------SR 181
            K  AA  Y     E          S +++    +      WA  +F             
Sbjct: 47  GKAIAAGFYAFNMPEEVGGGGLDYLSQALIERELS---KVSWALHVFVARPSKILMACKD 103

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +        LTE   G+D  AI ++  +  D         +   +  +D
Sbjct: 104 EQINDYLLPCVQGEKVDCFALTEPGAGSDANAIKTRAVRQGDDFVINGSKHFISHAGHAD 163

Query: 242 AFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             I+ A  +           V  LL D    G+  +R    + NR   T EL F +    
Sbjct: 164 FAIVFAVTDTYEHNGRKRNAVTALLVDRGTPGMTIRRGPKCVSNRGYHTYELFFDDCRVP 223

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG++               +  A   V   + +L  ++ +A  R   G  +     
Sbjct: 224 ASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLQWAADRKQFGQAIGSYQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+A  I AA  L+   A   D+      EA  A       K +  ++   V  E
Sbjct: 284 VSFKLADMATQIRAAEMLTLHTAWKMDQGNMTDGEAGMA-------KLFASEVLGKVADE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G ++E  + R +R +    I  G+       +   L +
Sbjct: 337 AVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIIARELLR 382


>gi|330900801|gb|EGH32220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 491

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/454 (17%), Positives = 156/454 (34%), Gaps = 60/454 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A+ N P+       GE     E  PA  A L      G   +  D     +       
Sbjct: 58  RKADENEPRYE----NGEAILIPEVKPAIDAFL----EAGFLNASRDFDAGGMQLPTLLS 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +    +        ++ +A+++         + +               PM + 
Sbjct: 110 QACFAHFQATNVGTTSYPFLTMGAANLIESFADDEQKQRFL-------------QPMIEG 156

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ ++ I ++ +   DG Y L G+K F+S            ++LA++
Sbjct: 157 RFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLRGNKIFISCGDHSLSENIVHMVLAKL 216

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
                    +  F+VP+ L +     G  N +    L +K+G +   +  L F +     
Sbjct: 217 PDAPAGVKGISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFGDNGECV 276

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G  +     +  M     +   + +          ++ YAR R             
Sbjct: 277 GYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSLEYARERPQGRLPDSKSPDS 336

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAP 398
               +I+   ++R +      +  A  L    +  FD+         R        ++ P
Sbjct: 337 KPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDRRHAHELLDLLTP 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           + K W  +        A++ +GG GY  E  + ++YR++  N+I  G+     LD+L   
Sbjct: 397 VVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGTHGIQSLDLLGRK 456

Query: 457 LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRD 489
           L + G    +QL   +      +   + +  LR 
Sbjct: 457 LAQNGGTGLKQLLRLISATCERAQAHQTLDELRQ 490


>gi|167720971|ref|ZP_02404207.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           DM98]
          Length = 395

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPVIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|254777206|ref|ZP_05218722.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 382

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 133/384 (34%), Gaps = 38/384 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV----RKQAHKIRA 137
           P    +   G+ WD+  F  A           GL                 R  A  +  
Sbjct: 28  PNHEKWERDGQ-WDRSLFVEAGK--------LGLLGFSAPERLGGPGVDDFRYNAIVVDE 78

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            +    A       +   +    +V L TTP   + W P + + E               
Sbjct: 79  LQRAGAAAEAIAFSLQNDIVLPYLVEL-TTPEQQRRWLPGVVTGE-------------TV 124

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+ +TE   G+D+A I +   +  D  Y ++G K F+S+       ++A          
Sbjct: 125 LGIAMTEPGTGSDLAGIRTTAVRDGDH-YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
           +  L+ D    G    R   KIG  +  T EL F++        L     G  + MK L 
Sbjct: 184 LSLLVVDADTPGFGRGRNLEKIGLHAQDTSELSFTDMRVPAENLLEAEGRGFYQLMKNLP 243

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ +V+      AE + Y ++RH  G  +      +  +A++A +I  A     
Sbjct: 244 QERLSLAVGAVAAAEAVFAETLDYVKQRHAFGAPIAAFQNSQFVLAELATEIDVARTYLD 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               +    +  +  AA  +        W   +        ++  GG GY+ E  +AR +
Sbjct: 304 DCLAAHLAGELTAARAARLKW-------WTTDLQVRTADRCLQLHGGYGYMREYGVARAF 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
            ++   +I  G+   M   +   L
Sbjct: 357 VDARIQTIYGGTNEIMKTIIARDL 380


>gi|134100528|ref|YP_001106189.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004993|ref|ZP_06562966.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913151|emb|CAM03264.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 381

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 131/375 (34%), Gaps = 34/375 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEA 148
           V+  P W         +  +    G+        +         +    +     A +  
Sbjct: 26  VDHFPDWEQAGVVPREVFVKLGELGIPGLQVPERYGGGGATSFKYNAIVSEETARAGVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L                      W P +   E             +   + +TE   G
Sbjct: 86  GGLSVHMNVVLPYFLAYGDEEQKARWLPGLAGGE-------------LMSSIAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGS 266
           +D+A +++  ++   G Y L+G K F++  + +D  +++A+   G      +  L+ +  
Sbjct: 133 SDLAGMSTTARREG-GDYVLNGAKTFITGGINADLVLVVARTGRGGDRRDGLSLLVVERG 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G ++  T EL F++       LLG    + G +        L  A+ 
Sbjct: 192 MPGFERGRNLDKLGLKAQDTAELSFTDVRVPAANLLGAEGAAFGYLTGNLPQERLSIAVA 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +    +L   + Y R R   G  +      K  +A  A +I A  AL  R     D+ 
Sbjct: 252 AQAAAEAALETTLEYVRERRAFGTPVSSFQNTKFELAACATEIEAGRALLDRALGEHDDG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                +AA         K +C ++   V+   ++  GG GYI E  IAR Y ++    I 
Sbjct: 312 ALSGADAAK-------VKIFCTELQARVVDRCLQLHGGYGYIREYRIARLYADARVTRIF 364

Query: 444 LGSGNAMVLDVLNLL 458
            G+   +   V   L
Sbjct: 365 GGTTEVLKTIVAKSL 379


>gi|302607764|emb|CBW45676.1| putative acyl-CoA dehydrogenase [Streptomyces pristinaespiralis]
          Length = 379

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 126/383 (32%), Gaps = 28/383 (7%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK---QAHKIRAA 138
           P L     G    D     P      RR    G+    +D  +  + +      + +   
Sbjct: 17  PVLEKLDEGHVERDAAAEFP--REAWRRLAGTGILGLPFDERYGGLGQSLTTTMYVLEGL 74

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
                         +  V +   +    +  + +   P I + E             +  
Sbjct: 75  GEGCRDAGLNFSACTHMVAAGVPLQRFGSDALKERHLPGICTGE-------------LIG 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              ++E   G+D  A+ ++  +  D         +  + P++D F + A+   R G   +
Sbjct: 122 AHAISEPDSGSDALAMRTRAVRDGDAYVLNGSKAFVSNGPVADVFTVYARTSDRPGPLSI 181

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L D    GL   R   K+G R++   EL F +        +    G    +  ++  
Sbjct: 182 TAFLVDRDTPGLTLGRPLAKMGLRTSPLCELYFDDCRVPADRVVGRPGGGFLVLDHVMRW 241

Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L S +++   M+  +   + YA+ R   G  +     +   I D+A  +  +    + 
Sbjct: 242 EILCSFVINAGEMQRRVDACVRYAQTRSQFGQPIGSYQAVSHKIVDMATGVETSRRWLYE 301

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A       + + + A A+++                  A++  GG+GY+ E  I    R
Sbjct: 302 TARRMTAGDNVTRDIAMAKLVTSEANVAS-------ALAAVQIFGGNGYMAEFGIESQLR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
            + A +I  G+       +  LL
Sbjct: 355 NAVAGTIYSGTSETQRNRIAALL 377


>gi|120610662|ref|YP_970340.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120589126|gb|ABM32566.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 399

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 134/389 (34%), Gaps = 34/389 (8%)

Query: 87  YGPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
                 R  +   H     A+ R     GL        +        A+ + A  +  + 
Sbjct: 35  RDRLATRVLEQFRHEKTDTAIFREMGELGLLGPTIPEQYGGPGLNYVAYGLIAREIERID 94

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                     S      +    T    + + PK+ S E+                 GLTE
Sbjct: 95  SGYRSMASVQSSLVMVPIFEFGTEAQKQKYLPKLASGEW-------------IGCFGLTE 141

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLE 263
              G+D  ++ ++  K + G        W  +SP++D F++ A+     G    +   + 
Sbjct: 142 PDHGSDPGSMATRAHKTAGGYKLKGSKMWITNSPIADVFVVWAKEVSESGAVGPIRGFVL 201

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAI 322
           +    GL    +  K+G R++ T E+   + F         +   V+ +K     L+SA 
Sbjct: 202 EKGMQGLTAPAIHGKVGLRASITGEIVMDDVFVPEEN----AFPEVQGLKGPFTCLNSAR 257

Query: 323 MSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             ++   +  AE   +  R     R   G  L    ++++ +AD+  +IA       RL 
Sbjct: 258 YGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEIAIGLQACLRLG 317

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              DE  +       A     I K   C  A  +   A + +GG+G  +E  +ARH    
Sbjct: 318 RMKDEGTA-------AVEATSIIKRNSCGKALDIARMARDMMGGNGISDEFGVARHLVNL 370

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFE 466
              +   G+ +   L +L   + G   F 
Sbjct: 371 EVVNTYEGTHDVHAL-ILGRAQTGIAAFA 398


>gi|126440657|ref|YP_001060196.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126220150|gb|ABN83656.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 395

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEVGLLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|228312334|pdb|3GQT|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312335|pdb|3GQT|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312336|pdb|3GQT|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|228312337|pdb|3GQT|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment
           (1,4-Dimethyl-1,2,
           3,4-Tetrahydroquinoxalin-6-Yl)methylamine
 gi|251836940|pdb|3GNC|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836941|pdb|3GNC|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836942|pdb|3GNC|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
 gi|251836943|pdb|3GNC|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei With Fragment 6421
          Length = 399

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 57  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 116

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 117 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 163

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 164 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 222

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 223 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 279

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 280 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 333 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 391

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 392 QTGIQAF 398


>gi|52842786|ref|YP_096585.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295416|ref|YP_127831.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
 gi|54298568|ref|YP_124937.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
 gi|52629897|gb|AAU28638.1| glutaryl CoA dehydrogenase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53752353|emb|CAH13785.1| hypothetical protein lpp2632 [Legionella pneumophila str. Paris]
 gi|53755248|emb|CAH16742.1| hypothetical protein lpl2502 [Legionella pneumophila str. Lens]
          Length = 385

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 126/368 (34%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++S   GL        +        A+ +    L          +   S      +
Sbjct: 45  KELIKKSADLGLLGLTLPAEYGGAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPI 104

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K + P+             M   ++    GLTE   G+D A++ +  +KI 
Sbjct: 105 FKFGSEEQKKRYLPE-------------MAAGNIIGCFGLTEPDSGSDPASMRTHAKKIE 151

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  ++P++D  I+ A+ E  +  F+V     D    G+    +K K+  R
Sbjct: 152 GGWILNGAKMWITNAPIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIH 337
           ++ T EL F N F      L  S   +     L  L  A   +              A  
Sbjct: 207 ASITGELVFDNVFVPDENLLPKSEKGLGA--ALSCLSQARYGIAWGAMGAAMACFDIARD 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M 
Sbjct: 265 YLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMI 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L +   
Sbjct: 318 SLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTLVLGRH 377

Query: 458 LEKGTNLF 465
           +  G N F
Sbjct: 378 IT-GINAF 384


>gi|307611459|emb|CBX01128.1| hypothetical protein LPW_28271 [Legionella pneumophila 130b]
          Length = 382

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 126/368 (34%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++S   GL        +        A+ +    L          +   S      +
Sbjct: 42  KELIKKSADLGLLGLTLPAEYGGAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPI 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K + P+             M   ++    GLTE   G+D A++ +  +KI 
Sbjct: 102 FKFGSEEQKKRYLPE-------------MAAGNIIGCFGLTEPDSGSDPASMRTHAKKIE 148

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  ++P++D  I+ A+ E  +  F+V     D    G+    +K K+  R
Sbjct: 149 GGWILNGAKMWITNAPIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLR 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIH 337
           ++ T EL F N F      L  S   +     L  L  A   +              A  
Sbjct: 204 ASITGELVFDNVFVPDENLLPKSEKGLGA--ALSCLSQARYGIAWGAMGAAMACFDIARD 261

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M 
Sbjct: 262 YLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMI 314

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L +   
Sbjct: 315 SLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTLVLGRH 374

Query: 458 LEKGTNLF 465
           +  G N F
Sbjct: 375 IT-GINAF 381


>gi|24213114|ref|NP_710595.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193817|gb|AAN47613.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 394

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 128/361 (35%), Gaps = 29/361 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVA 163
             R     GL           +    A         L A      L  ++  V   +   
Sbjct: 51  FRRIGSELGLFGVTVPEEDGGMGMD-AVAAVIIHEELSAYDPGFTLSYLAHEVLFVNNFY 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             +       +  K+ S E+               G+G+TE   GTD+  + +   K  D
Sbjct: 110 HSSNAAQRAKYLLKVISGEW-------------IGGMGMTEPGAGTDVLGMRTIAVKKGD 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++  +  +   F++ A++            + + S  G    + + K+G RS
Sbjct: 157 KYVLNGSKQYITNGNVGSVFLVYAKMNKD--SKRTTSFIVESSFPGFSVGKKEEKMGMRS 214

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYA- 339
           + T +L F +        +    G +  M     +  +  A  S+   +  +     Y  
Sbjct: 215 SPTTQLIFEDCEVPAENLVGQEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTI 274

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  L +   ++R +A+   D  AA AL +++A       S     +   + A  
Sbjct: 275 RHREAFGKKLSEFGQIQRLLAESYADYQAARALVYQVA-------SGIHPESRNSLGAAS 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    +MA  V   A++ +GG GY  E  + R +R+S   SI  G+  AM  +++  L+
Sbjct: 328 AKLVATQMAERVSRNAIQALGGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLK 387

Query: 460 K 460
           K
Sbjct: 388 K 388


>gi|332526806|ref|ZP_08402907.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332111208|gb|EGJ11240.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 383

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 135/373 (36%), Gaps = 23/373 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P    W+  E  P+ H + ++    GL    +   +       ++        +MA+  
Sbjct: 23  NPHVAAWEAAEEFPS-HEVFKKLGDLGLLGLKYPAEYGGAGLDFSYS------MVMAEAL 75

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  +   M TP + +       S E       P         LG++E  G
Sbjct: 76  GACHCGGVPMAIGVHTDMATPALARFG-----SEELKREVLVPTIAGDYVACLGVSEPGG 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+ +  +             W  +   +D   +LA             ++     
Sbjct: 131 GSDVAAVKTTARAEGGDYVINGTKMWITNGLKADWCCLLANTSDGPPHRNKSLIVVPMDA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+  Q++  KIG  S+ T +L F N        +     G    M       L  A  S
Sbjct: 191 PGITRQKI-RKIGMHSSDTAQLFFDNVRVPRRNLIGQEGMGFTFQMLQFQEERLWGAASS 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   +   I Y R+R   G  ++D  V+   +A++  ++ A  AL++R    +   +
Sbjct: 250 LKSLDRLIDLTIDYTRQRQAFGKPILDNQVVHYRLAELRTEVEALRALTYRAVELYVAGQ 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +        +A + K  C +++  V    ++  GG GY  E  I++ +R+S   SI  
Sbjct: 310 DVTR-------LASMAKLKCGRLSREVTDSCLQYWGGMGYTPENPISQAWRDSRLVSIGG 362

Query: 445 GSGNAMVLDVLNL 457
           G+   M+  +  L
Sbjct: 363 GADEVMLGIICKL 375


>gi|209870540|pdb|3EOM|A Chain A, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870541|pdb|3EOM|B Chain B, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870542|pdb|3EOM|C Chain C, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870543|pdb|3EOM|D Chain D, 2.4 A Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei
 gi|209870544|pdb|3EON|A Chain A, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870545|pdb|3EON|B Chain B, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870546|pdb|3EON|C Chain C, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|209870547|pdb|3EON|D Chain D, 2.55a Crystal Structure Of Native Glutaryl-Coa
           Dehydrogenase From Burkholderia Pseudomallei In Complex
           With A Small Molecule
 gi|281307101|pdb|3II9|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307102|pdb|3II9|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307103|pdb|3II9|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
 gi|281307104|pdb|3II9|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei At 1.73 Angstrom
          Length = 396

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 114 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 219

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 220 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 276

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 277 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 330 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 388

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 389 QTGIQAF 395


>gi|193077432|gb|ABO12244.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 607

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 95/519 (18%), Positives = 180/519 (34%), Gaps = 87/519 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       L A          
Sbjct: 71  ERVTVNPEVGVALKAFADAGLMSAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P   K +   +   +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGEPEKVKPYVNAMIEGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++  K  DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 178 RTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVP 237

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D +      N +    + +K+G R      L F              G L+G+   
Sbjct: 238 RKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              LI  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRVQ-GRSRSERNPSSPQIPLIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      ++ A AL    A   D+      A+ R +      ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQAHQLLDLLTPVVKSWSSE 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L    +      
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLS 476

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALAS 512
              L E++ +T+E        K    L+D      +   L R +TEK        + LA+
Sbjct: 477 MKLLHEKIMNTIE------LAKAEPSLKDHADQLDQKWQLIRNVTEKLHALTDVELQLAN 530

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +A  L   G   +  ++L     D     H ++    + 
Sbjct: 531 AANYLEAFGHLVVGWLWL-----DQAVVIHKLMPNSTDP 564


>gi|86135150|ref|ZP_01053732.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85822013|gb|EAQ43160.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 392

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 139/379 (36%), Gaps = 45/379 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K +  P      +++     I +GL        + P     A   + +   +M +
Sbjct: 29  ARDWVKRDVSPIIEDYAQKAEFPKQIINGLAEIGAFGPYIPEEFGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S  S         +         K + PK+ S E+                
Sbjct: 89  IERGDSGVRSTASVQSSLVMYPIFTYGNDEQRKKYLPKLASGEWMG-------------S 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G++   + +  +   D         W  ++P  D  ++ A+  EGR+   +V
Sbjct: 136 FGLTEPNHGSNPGGMETNFKDKGDHYLLNGAKMWISNAPFCDVAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F N         N+          L  L
Sbjct: 196 ERGME-----GFSTPETHNKWSLRASATGELIFDNVQVP---KENLLPNKSGLGAPLGCL 247

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   +S   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARYGISWGAIGAAMDCYDTALRYAKEREQFGKPIGQFQLQQKKLAEMITEITKAQLLA 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    +E K+ S + + A+           +MA  V  EA + +GG G   + SI RH
Sbjct: 308 WRLGTLKNEGKATSAQISMAKR-------NNVEMALKVAREARQMLGGMGISGDYSIMRH 360

Query: 434 YRESPANSILLGSGNAMVL 452
                +     G+ +  +L
Sbjct: 361 MMNLESVVTYEGTHDIHLL 379


>gi|284028112|ref|YP_003378043.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283807405|gb|ADB29244.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 373

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 133/388 (34%), Gaps = 35/388 (9%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           MA    P+L  +   GE             L R++   GL    +  S        A  +
Sbjct: 12  MATEVLPELADWERAGE---------LPRELHRKAGKVGLLGVGFPESVGGGGGSLADAV 62

Query: 136 RAARLYLMAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                   +    G + S      +   + +    +    W               P  +
Sbjct: 63  AVVEEMHYSGGSGGLVASLLTGGIAVPHIVVGGNEQQLDRWV-------------RPTLE 109

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +   L +TE  GG+D+A++ +  ++  D     +G K +++S     F+  A   G  
Sbjct: 110 GELIGALAITEPDGGSDVASLRTTARRDGDHFVV-NGAKTYITSGCRADFVTTAVRTGGP 168

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  L+ +    G    R   K+G   + T EL F+        L+G        + 
Sbjct: 169 GAHGISLLVIERGMPGFVVSRKLEKLGWLCSDTAELSFAEVRVPVENLVGAEGSGFVQLA 228

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
              +   L  A+ + +G + +L   + + R R   G  LI +  ++  + ++A  I  A 
Sbjct: 229 QNFVAERLTPAVQAYAGAQRALDLTVEWCRARETFGRPLISRQTVQHTLTEMARRIDVAR 288

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                +    +       E  +A+  A     W C        +A++  GG GY+ E  +
Sbjct: 289 VYVHDVVRRAEAGDDVIAEVCFAKNTAVEAGQWVCD-------QALQLHGGFGYLREAEV 341

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R YR+    ++  G+   +       L
Sbjct: 342 ERQYRDQKILALGGGTTEILTGLAAKRL 369


>gi|170702516|ref|ZP_02893395.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132583|gb|EDT01032.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 395

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 139/404 (34%), Gaps = 38/404 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              ++ A    Y   +L        R ++ +       + R     GL        +   
Sbjct: 23  RMVRDAAHA--YAQDKLAPRVTEAFRHERTDI-----EIFREMGEVGLLGPTIPEEYGGP 75

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                     AR           +MS  S      +    +    + + PK+ + E+   
Sbjct: 76  GLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKQKYLPKLATGEW--- 132

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D   + ++ +K+  G        W  +SP++D F++ 
Sbjct: 133 ----------IGCFGLTEPNHGSDPGGMVTRAKKVPGGYSLSGAKMWITNSPIADVFVVW 182

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A++E   G   +   + +    GL    +  K+G R++ T E+     F     + N+  
Sbjct: 183 AKLE-ENGKDAIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVLDEAFVP---EENLLP 238

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIAD 361
                      L+SA   ++   +  AE+  +  R     R   G  L    ++++ +AD
Sbjct: 239 NVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLAD 298

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I        RL    DE  +       A  +  I K   C  +  +   A + +GG
Sbjct: 299 MQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLDIARLARDMLGG 351

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 352 NGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIQAF 394


>gi|313234505|emb|CBY10462.1| unnamed protein product [Oikopleura dioica]
          Length = 707

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 141/361 (39%), Gaps = 36/361 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           ++ +        + ++ TP + + + P + S E                   LTE   G+
Sbjct: 228 YIGAHQSIGFKAILILGTPEMKEKYLPAVASGE-------------KIAAFCLTEPGTGS 274

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           D +++ ++  K  DG + ++G K +++   ++D F + AQV    E       +   + +
Sbjct: 275 DASSVQTRAVKQEDGSFLMNGGKIWITGGGIADIFTVFAQVPVEQEDGSTKDQMTAFIVE 334

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIM 323
               G+ +   + K+G + + T E+ F +         N+     E  K+ +  L+S   
Sbjct: 335 RDFGGVTHGAPEKKMGIKCSNTAEVYFDDVRIPA---ENIIGEVGEGFKVAMEVLNSGRY 391

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +           + +A  +A  R      +     ++  +A +  +  A+ A+S+ +AN
Sbjct: 392 GMGATLNGTQKGLIKKATEFAANRTQFRNKIYKFGAIQEKLARMHAEQYASEAVSYLVAN 451

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D             + A   K +  + A     E ++ +GG GY+ E+ + +  R+  
Sbjct: 452 AMDHKTEN------YHLEAACGKIFASERAWHCCDETIQVMGGMGYMFEQGVEKVMRDLR 505

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
              I  G+ + + L V     +G     Q  + + +   S      T+++  +    ++K
Sbjct: 506 IFRIFEGTNDILRLMVG---LQGLQYTGQQLAPIAKAAKSPIANAPTLIKFKMDQRAKEK 562

Query: 499 G 499
           G
Sbjct: 563 G 563


>gi|148358690|ref|YP_001249897.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|296108221|ref|YP_003619922.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148280463|gb|ABQ54551.1| glutaryl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|295650123|gb|ADG25970.1| glutaryl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 382

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 127/368 (34%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+++S   GL        +        A+ +    L          +   S      +
Sbjct: 42  KELIKKSADLGLLGLTLPAEYGGAEASYVAYGLVCQELERGDSGLRSFVSVQSSLCMYPI 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K + P+             M   ++    GLTE   G+D A++ +  +KI 
Sbjct: 102 FKFGSEEQKKRYLPE-------------MAAGNIIGCFGLTEPDSGSDPASMRTHAKKIE 148

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  ++P++D  I+ A+ E  +  F+V     D    G+    +K K+  R
Sbjct: 149 GGWVLNGAKMWITNAPIADIAIVWAKTEAGIRGFIV-----DTKSEGMSCPEIKLKMSLR 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIH 337
           ++ T EL F N F      L  S   +     L  L  A   +              A +
Sbjct: 204 ASITGELVFDNVFVPDENLLPKSEKGLGAA--LSCLSQARYGIAWGAMGAAMACFDIARN 261

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R      L    ++++ +AD+  +I  A  L+ ++    D+ +           M 
Sbjct: 262 YLLERKQFAKPLASFQLIQKDLADMYTEIIKAQCLNLQIGRLKDQHRETP-------TMI 314

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C+ A  +  +    +GG+G   E  + RH     +     G+ N   L +   
Sbjct: 315 SLAKGNACREALKIARKCRNLMGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTLVLGRH 374

Query: 458 LEKGTNLF 465
           +  G N F
Sbjct: 375 IT-GINAF 381


>gi|146280837|ref|YP_001170990.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145569042|gb|ABP78148.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 393

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 84/412 (20%), Positives = 146/412 (35%), Gaps = 51/412 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A + A  A+   P++       ER D   F        R     GL  +    
Sbjct: 23  ERMVQASAAQFA--ADKLAPRVLEAFRH-ERTDPAIF--------REMGETGLLGATIPE 71

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
           ++             AR           +MS  S      +         + + PK+ S 
Sbjct: 72  AYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPIFEFGNEATRQKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 132 EY-------------IGCFGLTEPNHGSDPGSMVTRAKKVDGGYRLSGSKMWITNSPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
            F++ A+ +       +   + +    GL    +  K+G R++ T E+   N F      
Sbjct: 179 VFVVWAKDDAGE----IRGFVLEKGWEGLSAPTIHGKVGLRASITGEIVMDNVFCPEENA 234

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             D+    GP         L+SA   +S   +  AE   +  R     R   G  L    
Sbjct: 235 FPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRQQFGRPLAANQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A     RL    DE  +       A  +  + K   C  A  V  
Sbjct: 289 LIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEITSLMKRNSCGKALDVAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 342 MARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIQAF 392


>gi|315506651|ref|YP_004085538.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413270|gb|ADU11387.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 382

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 24/303 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   +     +W P++ +              +      LTE   G+D AA+T++ 
Sbjct: 95  AKAIAAYGSAAQRAEWLPRLCAG-------------TALGCFALTEPDSGSDAAALTTRA 141

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            +            +  +  ++D  ++ A+  G  G   +   L   +  GL  + +  K
Sbjct: 142 TRDGGDWLITGAKTFITNGTVADVVLLFART-GGPGHRGISAFLVPTNVAGLTRREIHGK 200

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335
           +G R  AT EL F          L  V  G    +  L    +  A   V   +  L  A
Sbjct: 201 LGLRGQATGELRFDAVRVPDSARLGPVGGGFRLALATLAKGRMSVAAGCVGIAQGCLDAA 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA +R   G  +    ++++ +A IA+D AAA  L +R+A+  D  ++ + EA+ A  
Sbjct: 261 VGYAGQRTQFGKPIAGHQLVQQLLAAIAVDTAAARLLVWRVADLVDRGEAFATEASMA-- 318

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A      A++  GG GYI+E  + ++ R++   ++  G+     L + 
Sbjct: 319 -----KLFASEAAVRAANNAVQVFGGYGYIDEYPVGKYLRDARVATLYEGTSQIQQLLIG 373

Query: 456 NLL 458
             L
Sbjct: 374 RAL 376


>gi|315506020|ref|YP_004084907.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315412639|gb|ADU10756.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 380

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 25/361 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +LR     GL    +        +     ++   +     L     +S    S   +A
Sbjct: 42  REVLRTLGRAGLLGLPYAEEHGGAAQPYEVYLQVLEILASRWLAVAEAVSVHTLSCYPLA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K   P +   E             +     L+E +GG+D AA+T++  +  D
Sbjct: 102 QFGTDEQRK-LLPDMIGGE-------------LLGAYCLSEPQGGSDAAALTTRAVRDGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   + ++D + +  +  G  G   +  LL D S  G+  Q  +  +G  +
Sbjct: 148 AYVVTGTKAWITHARVADFYNIFCRT-GGPGPKGISCLLADRSTAGIHPQAAERTMGLHA 206

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +   ++ F +       L+G                 L  A  +V   + +L  A+ YAR
Sbjct: 207 SPIAQIAFDDARVPAERLIGGEGAGFTIAMSALDSGRLGIAACAVGLAQGALDYAVGYAR 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +ID   +   +AD A  I+AA AL+   A   D  ++ S EAA A       
Sbjct: 267 ERRQFGRAIIDFQGLGFNLADAATQISAARALTLAAARLRDAGRAYSIEAAKA------- 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +   +A  V  +A++ +GG+GY+ +  + R+ RE+    I+ G+     L +   L K
Sbjct: 320 KLFATDVAMRVTTDAVQVLGGAGYVADHPVERYMREAKVLQIVEGTNQIQRLVISRALAK 379

Query: 461 G 461
           G
Sbjct: 380 G 380


>gi|89897467|ref|YP_520954.1| hypothetical protein DSY4721 [Desulfitobacterium hafniense Y51]
 gi|89336915|dbj|BAE86510.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 604

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/445 (19%), Positives = 169/445 (37%), Gaps = 65/445 (14%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           + N ++ ++ A+   G    KV    ++    +     GL  S  DR  E  +     + 
Sbjct: 52  LINEDSDKIGAHFKDG----KVITPDSFKKAYKTINDAGLGPSNADREAEGHLPYTLVQA 107

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
               +   A L        +  + S++    +  + + + PK+   ++  T         
Sbjct: 108 NY-EILSHAGLAFTGFWGLNSGAISLIQQHGSEFIKQKFLPKMCEGQWAGT--------- 157

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
               + LTE   GTD+ A  ++     + GIY + G+K F+++   D       ++LA+ 
Sbjct: 158 ----MNLTEPGAGTDVGANITKAFATDEPGIYKIKGNKLFITAGDHDLCENFIHLVLART 213

Query: 250 EG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTF 295
           EG       +  F+VP+   +     G  N +    ++ K+G   + T  L +    N  
Sbjct: 214 EGARPGTAGLSLFVVPKYWVNDDGSLGEFNDVITTGIEEKMGQHGSPTCSLTYGENDNCR 273

Query: 296 GFLLGDL------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
           G+++GD             +  M     L++ I  ++    +   A  YA+ R       
Sbjct: 274 GYIIGDPPDESGKGQGIAQMFVMMNEERLNTGIQGLAAASQAFNLAREYAKIRVQGTKFT 333

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YAR 394
                   +++   ++R +      I A  AL  +     D +    + A         +
Sbjct: 334 DPKGPKVRIVEHEDVRRMLMLQKSCIEAIRALILKSCYYLDLSHDSEDPAEREFADGMFQ 393

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I  P+ K +   MA  +IAEA++  GG GY+ E  + +  R+    SI  G+     LD+
Sbjct: 394 ISNPMCKAYATDMAWPLIAEAIQVHGGYGYVSEYQVEQAARDVKICSIWEGTNFIQSLDL 453

Query: 455 LNL---LEKG---TNLFEQLFSTLE 473
           +     + KG    N  + + + +E
Sbjct: 454 VGRKFSMNKGKVFRNWLDDIAAFIE 478


>gi|41408507|ref|NP_961343.1| FadE25_3 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396863|gb|AAS04726.1| FadE25_3 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 397

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 45  DLRDQARKMGLFGYAIPQQWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W               PM    V     LTE   G++ A + ++     D
Sbjct: 105 GFGTEAQKARWLE-------------PMAAGDVVASFALTEPGAGSNPAGLRTKAVADGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+          +   L      G+       K+G  
Sbjct: 152 NWVISGQKRFITNAPVADLFVVFARTRPADDQGPGIAVFLVPADAAGVQVGAKDAKMGQE 211

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        + G  N+             +  A ++V   + +L E++ Y
Sbjct: 212 GAWTADVSFDDVRVGGDALIGGSENIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  +AD   ++ A  AL    A  +   + R            
Sbjct: 272 AATATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRRVA-------PS 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L + + L
Sbjct: 325 AAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNL 384

Query: 459 EKGTN 463
            K   
Sbjct: 385 VKAAQ 389


>gi|126436328|ref|YP_001072019.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236128|gb|ABN99528.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 382

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 138/379 (36%), Gaps = 28/379 (7%)

Query: 100 HPAWHALLRRSIHDGLHC-SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT- 157
           H A+  L R  +   +            + R    ++ A  +  MA  E           
Sbjct: 10  HDAFRQLARDFVEKEVVPQYPEWEKAGRMPRDVFKQMGALGMLGMAIPEEYGGAGIDDYR 69

Query: 158 ---------SASMVALMTTPRVHKDWAPKIFS---REYDPTNKAPMQKTSVAIGLGLTEK 205
                    + ++V L T     +   P        E        +   ++   + +TE 
Sbjct: 70  YNVVLQEEAARALVTLSTVRTQLEVILPYFLHYANDEQRKRWFPGLADGTLLTAIAMTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLL 262
             G+D+A + +   +  D  Y ++G K F++  + +D  +++A+   +       +  ++
Sbjct: 130 GTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRRGLSLIV 188

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R   K+G +   T EL F++       LLG+   +   +        L 
Sbjct: 189 VEDGMPGFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLGHNLAQERLT 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ SV+  R +L   I Y + R   G  +      K  +A ++ ++ AA  +  R    
Sbjct: 249 VAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEVEAAQTMLDRAVLD 308

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             +     E+AA         K +C +M    +   ++  GG GY+ E  IAR Y ++  
Sbjct: 309 HVDGVLSREDAAR-------VKLFCTEMQARAVDRCLQLFGGYGYMMEYPIARLYNDARV 361

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M + +   L
Sbjct: 362 ARIYAGTSEVMKVIIAKSL 380


>gi|110637812|ref|YP_678019.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280493|gb|ABG58679.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
          Length = 392

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 122/311 (39%), Gaps = 35/311 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    K + PK+ S E             +    GLTE   G++ A + +  +  
Sbjct: 111 IFKYGSEEQKKKYLPKLASGE-------------LLGCFGLTEPDHGSNPAGMVTSIKDA 157

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D         W  +SP +D  ++ A+ + GR+   +V R +E     G     + NK  
Sbjct: 158 GDHYILNGAKMWITNSPKADIAVVWAKDDAGRIKGIIVERGME-----GFTTPEIHNKWS 212

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++ T EL F N        L  + G    +K    LDSA   ++   +  A      A
Sbjct: 213 LRASITGELVFDNVKVPKTHVLPKADGLSGPLK---CLDSARYGIAWGALGAAMECYDIA 269

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            +YA  R   G  +    + ++ +A++  +I  A  L +RL    +E K+ + + + A+ 
Sbjct: 270 KNYAMERVQFGKPIAGFQLTQKKLAEMLTEITKAQLLVWRLGMLKNEGKASTGQVSMAKR 329

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                      MA  V  EA + +GG G   E  I RH     +     G+ +  +L   
Sbjct: 330 -------NNVDMALKVAREARQILGGMGITGEYPIMRHMMNLESVVTYEGTHDIHLLITG 382

Query: 456 NLLEKGTNLFE 466
           + +  G N F+
Sbjct: 383 HDIT-GLNAFK 392


>gi|229495254|ref|ZP_04388989.1| acyl-CoA dehydrogenase family protein [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317697|gb|EEN83595.1| acyl-CoA dehydrogenase family protein [Porphyromonas endodontalis
           ATCC 35406]
          Length = 576

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 95/502 (18%), Positives = 177/502 (35%), Gaps = 61/502 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L ++GE      A   A+  +   P L           +  + P   A L      GL  
Sbjct: 55  LHIVGELCGDVIA-PNAQNVDQTGPSLVE--------GRAVYDPYTQANLDAVRQAGLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R ++ +       I AA +   +     +L       A+ +    +    + + P+
Sbjct: 106 IALPRRYDGLNFPITPYIMAADIVSRSDAGFENLW-GLQDCATTLYEFGSEDQRERFLPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFL 235
           I + E               + + LTE   G+D+ A+  +    +  D  Y L+G K F+
Sbjct: 165 ISAGE--------------TMSMDLTEPDAGSDLQAVMLKATYNEQEDAWY-LNGVKRFI 209

Query: 236 SSPMSDAFIMLAQVE-GRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           ++  S   ++LA+ E G      +   + D  +  G+  +R+++K+G +   T EL FSN
Sbjct: 210 TNGDSHIHLVLARSEEGTRDGRGLSMFIFDSKNNPGVTVRRIEHKMGIKGVPTCELVFSN 269

Query: 294 TFGFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               L G+  +     +  +     L     +V     +  EA  YA  R   G  + + 
Sbjct: 270 AKAELCGERRLGLIKYIMALMNGARLGIMSQAVGLSEAAYQEAYAYAIERKQFGQTIDNF 329

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD----------EAKSRSEEAA-------YARI 395
           P +   ++ +     A+ A  +      D          E K   EE          A  
Sbjct: 330 PAVYEMLSIMRAKTDASRAHLYETCRFVDMYKTLEDIQRERKLTPEERKELKYYTRLADA 389

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             PI K    + A   + + ++  GGSGY+++ +  R YR+    +I  G+    V+  +
Sbjct: 390 FTPIGKGLSTEFANQNVYDCVQIHGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAI 449

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-------------DKGLAR 502
             +  GT  +E++      ++    + +   L        E                 AR
Sbjct: 450 RHVTTGTY-YERMHEYQATEVKPEWQAMKESLAAMNERAHELTQFVVEQKNQELLDFQAR 508

Query: 503 FLTEKIALASSAAALYRAGMND 524
            L E  + A     L  A  ++
Sbjct: 509 RLVEMTSHALFGHLLLLAANDE 530


>gi|121604041|ref|YP_981370.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593010|gb|ABM36449.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 398

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 132/371 (35%), Gaps = 33/371 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++  +   G   S  +      +   ++ + A  +  +       +   S      + 
Sbjct: 51  REIMNEAGAMGFLGSTIEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPIN 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D A++ ++ + +  
Sbjct: 111 AYGSEAQRQKYLPKLATGEW-------------VGCFGLTEPNHGSDPASMLTRAKPVDG 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKI 279
           G        W  +SP++D F++ A++E   G       +   + +    GL   +++ K+
Sbjct: 158 GYILKGAKMWITNSPIADVFVVWAKLEDAGGKVGGQEAIRGFVLEKGMKGLSAPKIEGKM 217

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
             R++ T E+   + F       N+             L+ A   ++   +  AE     
Sbjct: 218 SLRASITGEIVMDDVFVPS---ENLLPNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFR 274

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +I        R+    DE ++  E      
Sbjct: 275 ARQYTMDRVQFGRPLAQTQLIQKKLADMQTEITLGLQACLRVGRLMDEDRAVPE------ 328

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  +  +   A +  GG+G  +E  + RH       +   G+ +   L +
Sbjct: 329 -MISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIRHMINLETVNTYEGTHDVHAL-I 386

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 387 LGRAQTGLQAF 397


>gi|94314457|ref|YP_587666.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358309|gb|ABF12397.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 384

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 128/375 (34%), Gaps = 32/375 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGH 150
            + D+    P            G     +      +                     A  
Sbjct: 34  RKMDEAREFPL--EAYEALADAGYIGLFYPEHLGGMGGSYRDITVLLETLGYYYTGIAQA 91

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           + + +V +   +A   TP + ++  PKI S                 + L ++E   G+D
Sbjct: 92  ITTSAVYAGMHIAKFGTPEMQQELIPKIISG-------------KAKLALCMSEPGTGSD 138

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNG 269
           +A + +  +   D         W     ++D F+++ + +   G    +  LL D    G
Sbjct: 139 VAGLKTYAEPAGDEYILNGNKVWITCGHVADYFVVITRTDREGGRHQGISTLLVDAKAPG 198

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +   R    +G R+    E+ F N                ++  I+  L    + ++ + 
Sbjct: 199 VTV-RPLQMLGRRTTHANEVFFDNVRVPAKNLFGGEGRAWKN--IMSCLGLERLGLAAIS 255

Query: 330 VSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                     A  YA+ R   G  + D  V++  +AD+ +    A  + +R A+  D  +
Sbjct: 256 AGHCFKITEYARDYAKERVQFGKPISDFQVIQHKLADMLILSETARQVVYRAADVLDAGQ 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +   EA+ A+++A    + C  +        M+ + G+GY  E  +   +R+S    I  
Sbjct: 316 AAVTEASIAKVVASENNFKCADIG-------MQIMAGAGYSMEYDMQMFFRDSRVGPIGG 368

Query: 445 GSGNAMVLDVLNLLE 459
           G+       +   ++
Sbjct: 369 GTNEIQRNILAKQMD 383


>gi|226361029|ref|YP_002778807.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239514|dbj|BAH49862.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 382

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASM 161
             L R +   GL  + +  S           +     +  A    G   S   S  +   
Sbjct: 39  RTLHRDAAELGLLGAGFPESVGGEGGDLVDAVLICEEFHQAGASGGVFASLFTSGIALPH 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A    P   + W               P  +  +   L +TE  GG+D+  + +   + 
Sbjct: 99  LAAAGNPEQIEKWV-------------RPTLRGELIGSLAITEPGGGSDVGHLRTAAVRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D     +G K F++S +   F++ A   G  G   V  L+ +    G    R  +K+G 
Sbjct: 146 GDHFVV-NGAKTFITSAVRADFVVTAVRTGGAGAAGVSLLVIEKGTPGFEVARKLDKMGW 204

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R++ T EL F +       L+G+ N     +    +   +  A  + S  +  L   + +
Sbjct: 205 RASDTAELSFVDARVPAANLVGEENSGFAQIAQAFLTERIALAAQAYSSAQRCLDLTLQW 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMA 397
            R R   G  LI +  ++  + ++A     A   +  L   S    +    E  +A+  A
Sbjct: 265 VRDRETFGRPLISRQSVQNTVTEMARRTDVARVYTRALVERSLVSNEDFIAEVCFAKNTA 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                W       V  +A++  GG GY+ E  + R YR+     I  G+   +       
Sbjct: 325 VEAGEW-------VANQAVQLFGGLGYMRESEVERQYRDMRILGIGGGTTEILTGLAAKR 377

Query: 458 L 458
           L
Sbjct: 378 L 378


>gi|119898221|ref|YP_933434.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670634|emb|CAL94547.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 393

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 132/384 (34%), Gaps = 44/384 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P++       ER D+  F+             GL        +             AR  
Sbjct: 39  PRVQEAFRH-ERTDREIFNEMG--------ELGLLGPTIPEQYGGAGMNYISYGLIAREV 89

Query: 142 LMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                    +MS  S      +    T    + + PK+ + E+                 
Sbjct: 90  ERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLATGEW-------------VGCF 136

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A+ + G +  F++ 
Sbjct: 137 GLTEPNHGSDPGSMITRAKKVPGGYSISGAKMWITNSPIADVFVVWAKDDEGDIRGFVL- 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
               +    GL    +  K+G R++ T E+     F           G          L+
Sbjct: 196 ----EKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLK---GPFTCLN 248

Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           SA   ++   +  AEA +     Y   R   G  L    ++++ +AD+  +I        
Sbjct: 249 SARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLVQKKLADMLTEITLGLQACL 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++    D   +  E       +  I K   C  A  +   A + +GG+G  +E  +ARH 
Sbjct: 309 QVGRLKDAGNAPVE-------ITSIIKRNSCGKALDIARTARDMLGGNGISDEFCVARHL 361

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
                 +   G+ +   L +   +
Sbjct: 362 VNLEVVNTYEGTHDIHALILGRAI 385


>gi|297196545|ref|ZP_06913943.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297153272|gb|EFH32256.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 380

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 126/383 (32%), Gaps = 28/383 (7%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK---QAHKIRAA 138
           P L     G    D     P      RR    G+    +D  +  + +      + +   
Sbjct: 18  PVLEKLDEGHVERDAAAEFP--REAWRRLAGTGILGLPFDERYGGLGQSLTTTMYVLEGL 75

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
                         +  V +   +    +  + +   P I + E             +  
Sbjct: 76  GEGCRDAGLNFSACTHMVAAGVPLQRFGSDALKERHLPGICTGE-------------LIG 122

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              ++E   G+D  A+ ++  +  D         +  + P++D F + A+   R G   +
Sbjct: 123 AHAISEPDSGSDALAMRTRAVRDGDAYVLNGSKAFVSNGPVADVFTVYARTSDRPGPLSI 182

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317
              L D    GL   R   K+G R++   EL F +        +    G    +  ++  
Sbjct: 183 TAFLVDRDTPGLTLGRPLAKMGLRTSPLCELYFDDCRVPADRVVGRPGGGFLVLDHVMRW 242

Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L S +++   M+  +   + YA+ R   G  +     +   I D+A  +  +    + 
Sbjct: 243 EILCSFVINAGEMQRRVDACVRYAQTRSQFGQPIGSYQAVSHKIVDMATGVETSRRWLYE 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A       + + + A A+++                  A++  GG+GY+ E  I    R
Sbjct: 303 TARRMTAGDNVTRDIAMAKLVTSEANVAS-------ALAAVQIFGGNGYMAEFGIESQLR 355

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
            + A +I  G+       +  LL
Sbjct: 356 NAVAGTIYSGTSETQRNRIAALL 378


>gi|76810110|ref|YP_334609.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|254259102|ref|ZP_04950156.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
 gi|189339699|pdb|3D6B|A Chain A, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339700|pdb|3D6B|B Chain B, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339701|pdb|3D6B|C Chain C, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|189339702|pdb|3D6B|D Chain D, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From
           Burkholderia Pseudomallei
 gi|76579563|gb|ABA49038.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gi|254217791|gb|EET07175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           1710a]
          Length = 395

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVPG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|86137099|ref|ZP_01055677.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Roseobacter sp. MED193]
 gi|85826423|gb|EAQ46620.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein,
           putative [Roseobacter sp. MED193]
          Length = 509

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 156/477 (32%), Gaps = 42/477 (8%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW--DKVEFHPA 102
           A     P    +    +G +  S    E+A       P        G R    +V     
Sbjct: 19  AGANTLPDWDAEIASEIGGHFASFAEGEIA-------PLDEPGDVQGCRLTDGRVSMPDG 71

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           + A+ R     G        ++             + ++  A      +      +  ++
Sbjct: 72  FAAVYRAYAEQGWPSLTAPEAYGGQGMGALMLAVTSEIFSGANHSLQMVTGLVPGAVRVL 131

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T        P + S E                 + LTE   G+D+A +  + + + 
Sbjct: 132 MSFGTADQKSRHIPPLASGE-------------TIATMCLTEPGAGSDLAQVRCRAEPVG 178

Query: 223 DGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQ 273
              + ++G K F+S    D       ++LA+        +  FL P    DGS N +   
Sbjct: 179 -ESWQITGEKIFISGGDQDMSDRILHLVLARTSDSGIKGLSLFLCPCTRSDGSRNLVTVT 237

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           R++ K+G  ++ T +L F      L+G+       +  M     +D A+  V+    S  
Sbjct: 238 RIEEKMGLHASPTCQLAFEGAEAELIGEEGKGLMAMFTMMNHARVDVALQGVAHAARSYD 297

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEA 390
            A  YA  R   G  L   P      AD   +  +I         +A+       R +  
Sbjct: 298 IASSYAAERVQ-GRTLDGAPATLDQHADVRRMLDEIDGLAMTGRAMAHLACVTMERGDNP 356

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A    + P+ K  C +         M+ +GG GY+ E  + + YR++   +I  G+    
Sbjct: 357 ALVEFLTPLIKVHCTEAGIRAAELGMQVLGGYGYLREYRLEQTYRDARITAIYEGANGIH 416

Query: 451 VLDVLNLLEKG--TNLFEQLFSTLEQDLGSS----GKKVITILRDSISLCKEDKGLA 501
              +   L  G   + FE   ++       +           LR  ++  K+   LA
Sbjct: 417 ERMLATRLASGAAADAFETYVASQAAQTQEAKILSQLAAWRALRTRLATLKDPSPLA 473


>gi|326473184|gb|EGD97193.1| hypothetical protein TESG_04607 [Trichophyton tonsurans CBS 112818]
          Length = 618

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 127/558 (22%), Positives = 209/558 (37%), Gaps = 89/558 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    +       D++L  +++       P  + K+       V+S    + 
Sbjct: 4   SSSTEGFFQVQPLVQP-QIQEDAVLRRIVSLHLPSPLPPSLEKDFIRFSSLVISKPVLDY 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W AL   +I +GL          P     
Sbjct: 63  AADAERNQPYLKPLSTFGTENKRDPLVTGEGWRALQDINIREGLVGLA------PEPGLT 116

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR---------- 181
            H+ +      +++    HL +PS       A++T P    D A K+ SR          
Sbjct: 117 GHRTQW--NTRVSKGIKTHLWTPSS------AMVTCPGSMTDGAAKLLSRHLDSENGRIF 168

Query: 182 -EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI-------- 225
            E      +     +   G  +TE+ GG+D+    +  +K         DG+        
Sbjct: 169 AEALKRLTSRDPAIAWTSGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSTGMPLG 228

Query: 226 -YCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-------RLLEDGSPNGLCYQRLK 276
            + L G KWF S+  ++  IMLA+  E  +  F  P       +  ++   NG+  QRLK
Sbjct: 229 PWRLDGFKWFSSATDANMSIMLAKTGEDSISAFYAPLRRQVKGKDPQESELNGVRIQRLK 288

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK G ++  T ELE     G+L+G        +  +  +    + I SVS    SLA   
Sbjct: 289 NKFGTKALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICR 348

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF-----------------RLANS 379
            Y++ R  SG +L D P   R +A   +  AA+  L+F                   A  
Sbjct: 349 AYSKVRVTSGRLLRDTPSYVRTLARDHVKYAASMHLTFFVVALLGISEGSNCCSCMAAQI 408

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYR 435
               + ++   A  R++ P+ K      A   +  +ME +GG GY+E       IAR +R
Sbjct: 409 NILPRDKNHTLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFR 468

Query: 436 ESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++   SI  G+   M  DV+ +++  KG +    L   +   L          +  + S 
Sbjct: 469 DTCVLSIWEGTTEVMADDVMRVVKGSKGPDCLNALDKWVAHGL---------RVAMTHSF 519

Query: 494 CKEDKGLARFLTEKIALA 511
             E   L +   E ++ A
Sbjct: 520 TDEAVVLQQLWAEFLSYA 537


>gi|320163645|gb|EFW40544.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 644

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 94/485 (19%), Positives = 171/485 (35%), Gaps = 56/485 (11%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSA 159
            AW  L       G            +        R   +  M  L     L +      
Sbjct: 126 EAWDGLK----EMGAFGLQVPEELGGLGLTNTGYARLVEIVGMHDLGVGIALGAHQSIGF 181

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T      + PK+ + E                   LTE   G+D  +I S+ +
Sbjct: 182 KGITLFGTKEQKAKYLPKLAAGEN-------------IAAFALTEPSSGSDANSIRSRAK 228

Query: 220 KISDG--IYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLC 271
             +DG          W  +  +++ F + AQ        G +    V   + + S  GL 
Sbjct: 229 LSADGKHWVLNGSKIWISNGGIAEIFTVFAQTQVPDRKTGELKDK-VTAFIVERSFGGLT 287

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG--- 327
             + +NK+G + + T E+ F +    +    NV     E  K+ +  L++    +     
Sbjct: 288 NGKPENKMGIKCSNTAEVYFDDVKIPV---ENVLGQVGEGFKVAMAILNNGRFGMGAALS 344

Query: 328 --MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+  LA++  +A  R   G  + +  ++K   A +AL I A  ++++ LA + D   +
Sbjct: 345 GTMKAMLAKSAEHAINRTQFGSKIKEFGMIKEKFAQMALKIYATESMAYTLAANMDRGSN 404

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   +I A I+K +  + A +V  EA++ +GG G+++     R  R+     I  G
Sbjct: 405 D------YQIEAAISKVFASEAAWSVADEALQVMGGIGFMKAAGFERVVRDLRIFRIFEG 458

Query: 446 SGNAMVLDVL--NLLEKGTNLFEQL---------FSTLEQDLGSSGKKVITILRDSISLC 494
           +   + + +    + + G +L E           F  L Q+     K+++ +  D+I   
Sbjct: 459 ANEILRMFIALTGIQDAGKDLKEVQAALKSPISNFGVLSQEATKRIKRIVGVGHDTIKGV 518

Query: 495 KEDKGLARFLTEKIALASSAA---ALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
                    L E  A A  AA    L   G   I       R  D     +  +     A
Sbjct: 519 HPLLRGPAGLVESQATAFGAAVDSLLITHGRKIIDQQLKLKRVADAAIDLYASVAVLSRA 578

Query: 552 AHIID 556
            H ++
Sbjct: 579 THALN 583


>gi|163737903|ref|ZP_02145319.1| Butyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
 gi|161388519|gb|EDQ12872.1| Butyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
          Length = 387

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 122/368 (33%), Gaps = 32/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++I  GL+ +                +   +    A           V   S + 
Sbjct: 43  REIQAKAIEAGLYAANMPEEVGGAGLDTLTWLLYEKELGRANYALHWTC---VARPSNIL 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + +       E                 L +TE   G+D+  +T+  ++  D
Sbjct: 100 LAGTEEQKEKYLYPCIRGEKWD-------------CLAMTEPGAGSDLRGMTATARQDGD 146

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               L+G K F+S    +D  I+          R     +     D    G   +     
Sbjct: 147 EF-ILNGTKHFISHADIADFAIVFMATGEEDTPRGPKKKITAFFVDKGTPGFTIRDGYRN 205

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + +R      LEF +       +LG+++              L  A   +     +L  A
Sbjct: 206 VSHRGYTNAVLEFDDCRLPKSSVLGEVDKGFDVANTWLGATRLQVAATCLGRAERALDHA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA  R   G  +     +   +AD+A ++ AA  L++  A  FD+      + + A++
Sbjct: 266 ISYAAERRQFGQQIGKFQGVSFKLADMATELKAANLLTWEAAWKFDQGSVTEADMSMAKL 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A        +M   V  EA++  GG G ++E  + R +R++    I  G+       + 
Sbjct: 326 KA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQRHIIS 378

Query: 456 NLLEKGTN 463
             L +   
Sbjct: 379 RELLRAQG 386


>gi|307317497|ref|ZP_07596936.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
 gi|306896655|gb|EFN27402.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83]
          Length = 386

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 98/286 (34%), Gaps = 14/286 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +       P  +      L +TE   G+D+  +    +   D         +   + ++D
Sbjct: 104 DQRERYLLPAVRGDKFDALAMTEPDAGSDVRGMKCFARPDGDDWIVNGTKHFISHADIAD 163

Query: 242 AFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
             I+          R     +   L D    G   +   N + +R      L F +    
Sbjct: 164 FVIVFIATGEEQTPRGPKKKITCFLVDRGTPGFEIREGYNSVSHRGYKNCILTFDDCRLP 223

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG+++       D      L  A  SV   R +   A+ YA  R   G  +     
Sbjct: 224 SAQILGEVHKGFDIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+  +I AA  L+   A   D+    + E           K +  +M   V  E
Sbjct: 284 VSFKLADMITEIDAADLLTLSAAWRLDQGLPSNRE-------IASAKVFATEMLARVTDE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 337 AIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|163846383|ref|YP_001634427.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524149|ref|YP_002568620.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667672|gb|ABY34038.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448028|gb|ACM52294.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 485

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 112/489 (22%), Positives = 207/489 (42%), Gaps = 43/489 (8%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
            +D      +  + +    E    G+ V        A +    TP L  +   G+R D++
Sbjct: 16  LADLAQPDYLEAYQAWWEHE----GKPVS-------AAIDRAGTPWLRMFDRQGQRVDEI 64

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            +   +  ++R+    G+   IW R F        + +     YL A  +AG     +V+
Sbjct: 65  LYPAEYWRMVRQGYQSGV---IW-RVFTETSLVPHYLLG----YLTAFYDAGLYCPYTVS 116

Query: 158 --SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A  +A   T  V   + P +  ++           T       +TE  GG+D+    
Sbjct: 117 LSTAVPLAKYGTEAVKAQFLPLLLRQD----------ATVWQGATWMTEIGGGSDLGTTV 166

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEG----RVGCFLVPRLLEDGSPNG 269
           +      DG + LSG K+F S+  ++  ++ A+          +G FLVPR   DGS N 
Sbjct: 167 ATIAVAEDGRWYLSGDKYFASNVGAELAVVAARFATGPADIRGLGLFLVPRYRADGSLN- 225

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
              +RLK+KIG R+  T E+E   +  +LLG        + +   L  + +++ SV+  +
Sbjct: 226 YTIRRLKDKIGTRAVPTGEVELRRSEAYLLGRAEWGIYLILETLNLSRVANSVGSVALAQ 285

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----S 385
            +LAEA+ +A +R   G  +   P++KR I +  +++ AA AL++      ++       
Sbjct: 286 RALAEAVSFAHQRRAFGKPIAAHPLLKRQIEERIVELEAAFALAWEAVCLLEQVWHVTPP 345

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E+    R++A + KYW  + A       ME  GG G + E +  R  R++    I  G
Sbjct: 346 YPEQYHLFRLLAHLAKYWTAEFAVQTAKWGMEVHGGIGTLAEYNAERWLRDAMILPIWEG 405

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARFL 504
           + +  +LD L ++E+       L          +   +   +   ++L +E+ +  A  L
Sbjct: 406 TPHRQILDGLEVMERKGAHRMLLHYLAADAPTQALTDMQHRIEAHLALPQEEKEAGAESL 465

Query: 505 TEKIALASS 513
              +AL ++
Sbjct: 466 FRDLALLTA 474


>gi|320450348|ref|YP_004202444.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus
           SA-01]
 gi|320150517|gb|ADW21895.1| acyl-CoA dehydrogenase, short-chain specific [Thermus scotoductus
           SA-01]
          Length = 515

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/517 (21%), Positives = 198/517 (38%), Gaps = 42/517 (8%)

Query: 33  GMNAYSSDSLLVALIANFPSVV-HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
           G + Y  DS L A++  F   +  +EL   G+ V     +    +     P+L  +   G
Sbjct: 9   GEDHYKLDSDLKAILDTFAPGLPQEELSAFGKLVGEEVLEVAHHVDQDAPPRLQMHDLDG 68

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R D+    PA   LL +                P    +   +  A  YL+A      +
Sbjct: 69  KRIDRALLSPAQKILLEKLR----------PMIRPAYEGRGWPLHYAFGYLLADGGLYCI 118

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +   A  +           +AP+          K  +          +TE +GG+D+
Sbjct: 119 LTITHQVAYALH---------KYAPE------HEGVKRELLYGPAFGATWMTEIQGGSDL 163

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNG 269
            A  +  ++  +      G K+F S   ++D  I+ A+ EG   G   +   L      G
Sbjct: 164 GANRTVARQEGNAYRLYQGDKYFASGAGLADYAIVTARPEGAPAGPKGLGLFLLPREVEG 223

Query: 270 ---LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +R K K+  R+  + E+E   +  + +G L        +   +  L +A  ++ 
Sbjct: 224 RLNFTVRRFKEKLATRAVPSGEVELEGSLAYPIGRLEEGIYYTLENLTVSRLANAAAAMG 283

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-- 384
             + +  EA+   RRR   G  L+   +++  + ++ L     TAL F    +FD+A   
Sbjct: 284 IAKKAHLEALFRVRRRTAFGKTLLQHDLIQHDLLEMRLRQVGGTALGFLAIQAFDQAWEE 343

Query: 385 --SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               SE    AR+++ + K    + A A+ A AME  GG G++EE  +AR +RE+    I
Sbjct: 344 RPPYSEGYHLARLLSHLAKGRTAEHASAITALAMELFGGLGFLEEYGVARWHREALITPI 403

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
             G  N   LD+L  + K     E   + L    G S +      +    L +E    A+
Sbjct: 404 WEGPANIQALDMLEAILK-KRAHEPFLAIL----GESPRAQAEAHKILRKLQEEGPWYAK 458

Query: 503 FLTEKIALASSAAALYRAGMNDIAD--VFLENRFLDN 537
                +A A +  AL +       +       RFL  
Sbjct: 459 EALRALADAVTVYALEKVAAEPFPELAALYARRFLKG 495


>gi|317505930|ref|ZP_07963763.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255776|gb|EFV15013.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 382

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 131/373 (35%), Gaps = 23/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++    P    L R++   GL    +  S        A  + A       +   
Sbjct: 26  PNAAEWERAGELP--RELHRKAGALGLLGLPFPESVGGAGGNSADALIA------CEALH 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                  + ++     +  P +      ++  R   PT         +   L +TE  GG
Sbjct: 78  EAGAPGGLFASLFTCGIAVPHMAASGDERLIERYVRPTL-----AGELIGSLAITEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  +T+  +   D  Y ++G K +++S +   +++ A   G  G   V  ++ D    
Sbjct: 133 SDVGHLTTSARLDGDH-YVINGAKTYITSGVRADYVVTAARTGGEGAGGVSLIVVDKQTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G R + T EL + +       L+G  N     +    +   ++ A  + 
Sbjct: 192 GFTVSRKLDKLGWRCSDTAELSYVDVRVPARNLVGAENSGFAQIASAFVSERVNLAGQAY 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  +  L     + R R+  G  LI +  ++  +A++A  I  A   +  +         
Sbjct: 252 ASAQRCLDITAQWCRDRNTFGRPLISRQGVQNTLAEMARRIDVARVYTRHVVEREIAGDR 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K    +    V  +A++  GG GY+ E  + R YR+     I  G
Sbjct: 312 DLVAQ------VCFAKNTAVETGEWVANQAVQLFGGLGYMAESEVERQYRDMRILGIGGG 365

Query: 446 SGNAMVLDVLNLL 458
           +   +       L
Sbjct: 366 TTEILTTLAARRL 378


>gi|218780505|ref|YP_002431823.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761889|gb|ACL04355.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 390

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 133/372 (35%), Gaps = 28/372 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AG 149
           + W++    P  HAL ++    G     +D  +        +++         Q      
Sbjct: 38  DEWEETGETPL-HALFKKMGDLGFLGIRYDPKYGGQGLDYWYELVFLEELAHIQGLGLPV 96

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   +  +   +    +  + + +               P     +   + +TE   G+
Sbjct: 97  AIAVQTHMATPAIYEFGSEYLKETYL-------------VPAIAGDMVTSIAVTEPGAGS 143

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D++A+ +  +K  D         +  +   +D   +LA+     G       +   +  G
Sbjct: 144 DVSALATTAKKDGDHYVINGSKTYITNGTQADYLTLLARTSDDPGYHSFSLFVVPTNLPG 203

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVSGM 328
               +  +K+G RS+ T EL F +        +     G +  M+   +   + +   G 
Sbjct: 204 FQVSKKLDKLGMRSSDTAELFFDDVRIPKENLIGREGEGFIYQMQQFQHERFSAIP-GGY 262

Query: 329 RVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            V+   +   + Y + R V G  LI + +++  +A    +I    +L++ +         
Sbjct: 263 IVAKDIIDLTLDYIKGRVVFGKPLIKRELLQHRLAQWLTEIECLKSLTYHIVQMKMAGLE 322

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E +  ++ A        K+   V A+ ++  GG G++ E  I R YR++   S+  G
Sbjct: 323 CTREISMGKLKAA-------KVLQGVAADCIQMFGGMGFMNEALITRFYRDARIISVGGG 375

Query: 446 SGNAMVLDVLNL 457
           +   M   +  L
Sbjct: 376 ADEVMCQVIARL 387


>gi|209965427|ref|YP_002298342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
 gi|209958893|gb|ACI99529.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW]
          Length = 599

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 99/566 (17%), Positives = 191/566 (33%), Gaps = 67/566 (11%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER---- 93
             D LL  +I     +     + L    +  T +  AR+A       H            
Sbjct: 8   EIDFLLHDVIGLDALLRRPRHQHLDRGTVDETVRTAARLAEEYFAP-HYRAADSHEPERE 66

Query: 94  --WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
               +V   P     +      G   +  D +   +            ++  A +     
Sbjct: 67  GGTGRVVMLPEVKRAVDAFAEAGFLAAHHDEARGGLQLPWTVVQACFAIFQAANIATAAY 126

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              ++ +A+++    T    + +              APM        + L+E + G+ +
Sbjct: 127 PFLTIGAANLIDAFGTEEQKRRFM-------------APMLTGRFFGTMALSEPQAGSSL 173

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPR 260
           A I +      DG Y ++G K ++S+   +       ++LA+++G       +  F+VPR
Sbjct: 174 ADIRTSAAPEPDGSYSITGTKQWISAGEHELSENIVHMVLARIKGAPAGVKGISLFIVPR 233

Query: 261 LL--EDGSPNG---LCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDM 312
               EDGS  G   +    L +K+G R   +  L F       GFL+G  N     +  M
Sbjct: 234 FRVAEDGSLQGDNDVRLVSLLHKMGYRGTTSTILSFGEAGRCQGFLVGQENQGLACMFHM 293

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIAD 361
                +   + + +        ++ YAR R                 +     +KR +  
Sbjct: 294 MNEARIGVGLGAAALGYAGFRYSLDYARTRPQGRPPEARDPASPMIPIAGHADVKRMLLQ 353

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
                  A AL    A   DE K+  E AA         I+ P+ K W  +        A
Sbjct: 354 QKAASEGALALCLYCARLVDEQKTAPEPAARERAGLLLDILTPVAKSWPSEHCLEANKWA 413

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLE 473
           ++ +GG GY  +  + ++YR++  N I  G+       L    + ++       L  T+ 
Sbjct: 414 IQILGGYGYTRDYPVEQYYRDNRLNPIHEGTYGIQANDLAGRKVWQQNGASLTLLAETVR 473

Query: 474 QDLGSSGKKVITILRDSI------SLCKEDKGLARFLTE-KIA--LASSAAALYRAGMND 524
           + +  + +        +       ++ +  + L R   E ++A  LA++ A L   G   
Sbjct: 474 ETIAEAARDADLAPHAAALARALETVAETTRVLGRERAEGRVAEMLANAVAYLEMMGHTV 533

Query: 525 IADVFLENRFLDNCHSTHCMLHGRFN 550
           +A ++L    +             + 
Sbjct: 534 LAWIWLRQALVARAALADGRGDADYY 559


>gi|170050078|ref|XP_001859196.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
 gi|167871659|gb|EDS35042.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex
           quinquefasciatus]
          Length = 359

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 137/360 (38%), Gaps = 25/360 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P    ++ +    G+        +     +         L L   +E       
Sbjct: 8   DREGRFP--KEVIEQLADLGMMRVTVGPEYPGGSGQGM-------LALSLIVEELSRGCG 58

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  S   +       ++ +   ++ SRE            +      L+E   G+D+AA+
Sbjct: 59  STGSIVSIHNC----LYANLLDRVGSREQKDRF-FRKYSCATLGAFALSEADAGSDVAAL 113

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQ 273
           +++  +  DG        W  S+  + + I+ A V   +    +   L D     GL   
Sbjct: 114 STRAVEDGDGFVLHGTKAWVTSALEAKSGIIFATVNPELKYKGITAFLVDFEKAQGLTIG 173

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           R + K+G R+++T  L   N        L  +  G    M+ L    +  A  ++   + 
Sbjct: 174 RPEEKLGIRASSTCNLILENVKIPKSNLLGTIGGGFRLAMEQLDRARIGIASQALGIAQA 233

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           SL EAI YA++R   G  L+  PV++  IA++A+ I ++  L  + A   D  +  ++  
Sbjct: 234 SLEEAIAYAKQRIAFGEPLLKLPVVRTRIAEMAVRIESSRLLVRKAATEIDRQRPATKSC 293

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+ +A  T  +             + +GG GY+++    R YR++    I  G  +  
Sbjct: 294 SMAKWVAGETATFA-------AHNCQQIMGGMGYVKDLPAERLYRDARITEIYGGVTDVQ 346


>gi|254464312|ref|ZP_05077723.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206685220|gb|EDZ45702.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 406

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 86/432 (19%), Positives = 153/432 (35%), Gaps = 46/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L       P  +  +L    E ++S +A+  A+        L+AY       +  E  
Sbjct: 13  PDLGRFNWEDPLRLEDQLTED-ERMISASARAYAQE-KLQPRVLNAY-------ENEETD 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSA 159
           P    + R     GL  +     +  +          AR           +MS  S    
Sbjct: 64  P---EIFREMGEMGLLGTTIPEEYGGLGGGYVSYGLVAREVERVDSGYRSMMSVQSSLVM 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + PK+ S E+                 GLTE   G+D A++ ++ +
Sbjct: 121 YPIYAYGSEEQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPASMKTRAE 167

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K   G        W  ++P++D F++ A+ E   G   +   + D    GL   +++NK 
Sbjct: 168 KTEGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLDKGLKGLSAPKIQNKA 225

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+             +     V+ +K     L+ A   +S   +  AEA  +
Sbjct: 226 SLRASITGEIVMDGVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGAMGAAEACWH 281

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L +  + +  +A++  +I      S R+    DEA +       A
Sbjct: 282 AARQYGLDRTQFGRPLANTQLFQLKLANMQTEITLGLQASLRVGRLMDEANA-------A 334

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  I K   C  A  +   A +  GG+G   E ++ RH       +   G+ +   L 
Sbjct: 335 PEMISIVKRNNCGKALEIARMARDMHGGNGISLEFNVIRHMVNLETVNTYEGTHDVHAL- 393

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 394 ILGRAQTGLQAF 405


>gi|312114593|ref|YP_004012189.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219722|gb|ADP71090.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 395

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 82/441 (18%), Positives = 152/441 (34%), Gaps = 57/441 (12%)

Query: 32  IGMNAYS-SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90
           IG NA+   D LL+         + +E             ++ AR  +Y   QL      
Sbjct: 3   IGKNAFRWDDPLLLE------DALTEE---------ETMVRDSAR--SYCQDQLLPRIRE 45

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAG 149
             R +  +      A++      G   S     +         + + A  +  +      
Sbjct: 46  ANRHEVFDC-----AVMTEMGSLGFLGSTLPEIYGGAAVNYVCYGLIAREVERVDSGYRS 100

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    T    + + PK+   E+                 GLTE   G+
Sbjct: 101 AMSVQSSLVMYPIYAYGTEEQRRKYLPKLARGEW-------------IGCFGLTEPDAGS 147

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ ++ +K   G        W  +SP++D F++ A+ +      ++   + +    G
Sbjct: 148 DPGSMKTRARKTDGGWLLSGSKIWITNSPVADVFVVWAKDD----AGIIKGFILEKGMKG 203

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L   +++ K   R++ T E+   + F     D N              L+ A   ++   
Sbjct: 204 LSAPKIEGKFSLRASITGEIVMESVFVP---DENRLPNVEGLKGPFGCLNRARYGIAWGV 260

Query: 330 VSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  AE   +A R     R   G  L +  +++  +A++  +IA       RL   FDE K
Sbjct: 261 LGAAEFCFHASRQYTLDRKQFGRPLANTQLVQLKLANMETEIALGLHACLRLGRLFDEQK 320

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  M  + K   C  A  +   A +  GG+G  +E  + RH     A +   
Sbjct: 321 -------MAPEMISMLKRNNCGKALDIARIARDMHGGNGISDEFHVIRHAMNLEAVNTYE 373

Query: 445 GSGNAMVLDVLNLLEKGTNLF 465
           G+ +   L +   +  G N F
Sbjct: 374 GTHDVHALILGRAIT-GLNAF 393


>gi|124007696|ref|ZP_01692399.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134]
 gi|123986818|gb|EAY26590.1| acyl-CoA dehydrogenase  1 [Microscilla marina ATCC 23134]
          Length = 406

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 33/310 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    K + PK+ S EY                 GLTE   G++ + + S+ +  
Sbjct: 125 IYTFGSEEQKKKYLPKLASGEY-------------LGCFGLTEPNHGSNPSGMESRLEDK 171

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  +SP +D  ++ A+ +       +  ++ +    G     + +K   
Sbjct: 172 GDHYVLNGAKMWITNSPKADIAVVWAKNDEGR----ILGVIVERGMEGFSTPTIHDKWSL 227

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
           R++ T EL F++     +   NV  G       L  LDSA   +S   + +A      A 
Sbjct: 228 RASVTGELVFNDVK---IPKENVLPGVSGLKGPLNCLDSARYGISWGAIGVAMDCYDTAR 284

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +    ++++ +A++  +I  A  +S+RL    +E K+ + + + A+  
Sbjct: 285 RYALERKQFGKPIAGFQLIQKKLAEMLTEITKAQLVSWRLGVLKNEGKATTAQVSLAKR- 343

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A     EA + +GG G  +E SI RH     +     G+ +  +L +L 
Sbjct: 344 ------NNIEIAMHTAREARQILGGMGITQEYSIMRHMMNLESVVTYEGTHDIHLL-ILG 396

Query: 457 LLEKGTNLFE 466
               G   F 
Sbjct: 397 HEITGIQAFR 406


>gi|260553825|ref|ZP_05826094.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260405035|gb|EEW98536.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 406

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 126/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 64  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 124 TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVDGGYR 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 171 LSGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 230

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 231 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+ ++IA     + R     DE  +  E          + 
Sbjct: 288 DRKQFGRPLAANQLIQKKLADMQMEIALGLQAALRFGRMKDEGIASVE-------GTSLI 340

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 341 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 399

Query: 461 GTNLF 465
           G   F
Sbjct: 400 GIAAF 404


>gi|239945565|ref|ZP_04697502.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239992032|ref|ZP_04712696.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291449020|ref|ZP_06588410.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291351967|gb|EFE78871.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 404

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 142/390 (36%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLE 147
           P    WD  E  P    +++ +   GL+   ++   +         ++ A   L      
Sbjct: 29  PAAAEWDAREETP--WPVIQEAARIGLYG--FESLADLYGDPTGLSLQIANEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G  +  +  + + +    TP    +W P+ F  E DP                ++E   
Sbjct: 85  IGMALFGTSLAVAGIFASGTPDQLAEWVPQCFGDEDDP----------KVAAFCVSEPGA 134

Query: 208 GTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D++A+T++ +    +D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVSAMTTRARYDEAADEWAISGQKAWITNGGIAEVHVVVASVDPSLGSRGQAAFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN------------VSTGPVEDMK 313
              GL   R   K+G R++ T +L   +        L                   +   
Sbjct: 195 GTKGLTAGRTVKKLGLRASHTADLFLDDVRVPGHCLLGGKERLDARLARAREGSTAKGQA 254

Query: 314 ILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   +      A  ++   R +   A+ YA  R   G  +I+   +  A+ADI  +I A
Sbjct: 255 AMATFEVSRPTVAAQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L ++ A      ++             ++K    ++A A   +A++ +GG+GY  E 
Sbjct: 315 VRLLIWQAAWMARNDRTFDA------GQGSMSKLRAGELAVAATEKAVQILGGAGYSREH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R YR++   +I  G+     L +   +
Sbjct: 369 PVERMYRDAKIYTIFEGTSEIQRLVIARAI 398


>gi|295836355|ref|ZP_06823288.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|295825977|gb|EFG64589.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 606

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 97/554 (17%), Positives = 191/554 (34%), Gaps = 84/554 (15%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPA 102
               + +   +  + + +   +   +  A   ++ + + P            ++V   P 
Sbjct: 34  ARERYAAHDRETFDAVLDLSETLATRHFAPHNKLGDAHEPTFDG--------ERVHVIPE 85

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               LR     GL  +  D S   +   +         +  A +        ++ +A+++
Sbjct: 86  VGEALRVFADAGLTSAGLDASVGGMQLPRVVTDACFAWFQAANVGTSAYPFLTIGNANLL 145

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                            SRE   T   PM +      + L+E + G+ +A + ++ ++  
Sbjct: 146 LAHG-------------SREQIDTYVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAERAG 192

Query: 223 DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPRLLED-----GS 266
           DG Y L G+K ++S    +       ++LA+  G          F+VP+ L D     G+
Sbjct: 193 DGTYRLFGNKMWISGGDHELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDEEGGTGA 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILI 316
            N +    L +K+G R      L F              G L+G+ N     +  M    
Sbjct: 253 RNDVVLAGLNHKMGYRGTTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEA 312

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +   + + +        A+ YAR R                 +I+   ++R +      
Sbjct: 313 RIGVGLGATALGYTGYLHALDYARTRPQGRPVAAKDPATAQVPIIEHTDVRRMLLAQKSY 372

Query: 366 IAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           +  A AL+       DE ++  E            I+ P+ K W  +      + A++  
Sbjct: 373 VEGALALTLYCGRLVDEQRTAPEPAAREAAGLLLDILTPVAKSWPSQWCLEANSLAIQVH 432

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG GY  E  + + YR++  N I  G+     LD+L    + K       L   +E    
Sbjct: 433 GGYGYTREYDVEQFYRDNRLNPIHEGTHGIHGLDLLGRKAVMKDGAALRLLLGRVE---- 488

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTE-----------KIALASSAAALYRAGMNDIA 526
            + ++  +   D+ +   E +  A  L             + ALA+++  L  AG   +A
Sbjct: 489 DTARRATSAGGDAATYATELREAATRLAAVTARLWQGGDPRTALANASVYLEAAGHVVLA 548

Query: 527 DVFLENRFLDNCHS 540
            ++LE         
Sbjct: 549 WIWLEQLLAAGAGE 562


>gi|326317978|ref|YP_004235650.1| glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374814|gb|ADX47083.1| Glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 399

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 134/389 (34%), Gaps = 34/389 (8%)

Query: 87  YGPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMA 144
                 R  +   H     A+ R     GL        +        A+ + A  +  + 
Sbjct: 35  RDRLATRVLEQFRHEKTDTAIFREMGELGLLGPTIPEQYGGPGLNYVAYGLIAREIERVD 94

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                     S      +    T    + + PK+ S E+                 GLTE
Sbjct: 95  SGYRSMASVQSSLVMVPIFEFGTEAQKQKYLPKLASGEW-------------IGCFGLTE 141

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLE 263
              G+D  ++ ++  K + G        W  +SP++D F++ A+     G    +   + 
Sbjct: 142 PDHGSDPGSMATRAYKTAGGYKLKGSKMWITNSPIADVFVVWAKEVSESGAVGPIRGFVL 201

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAI 322
           +    GL    +  K+G R++ T E+   + F         +   V+ +K     L+SA 
Sbjct: 202 EKGMQGLTAPAIHGKVGLRASITGEIVMDDVFVPEEN----AFPEVQGLKGPFTCLNSAR 257

Query: 323 MSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             ++   +  AE   +  R     R   G  L    ++++ +AD+  +IA       RL 
Sbjct: 258 YGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEIAIGLQACLRLG 317

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              DE  +       A     I K   C  A  +   A + +GG+G  +E  +ARH    
Sbjct: 318 RMKDEGTA-------AVEATSIIKRNSCGKALDIARMARDMMGGNGISDEFGVARHLVNL 370

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFE 466
              +   G+ +   L +L   + G   F 
Sbjct: 371 EVVNTYEGTHDVHAL-ILGRAQTGIAAFA 398


>gi|119479329|ref|XP_001259693.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119407847|gb|EAW17796.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 639

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 116/572 (20%), Positives = 211/572 (36%), Gaps = 78/572 (13%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTP 82
           P      N Y++D+ L  L++ +        +   L  LGE  +S   +E +  A  + P
Sbjct: 20  PEPLQ--NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQP 77

Query: 83  QLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            +  Y   G+R+D  ++     W  L R     G+    +D S+    R     ++    
Sbjct: 78  YVKGYNVWGQRYDYDRLITSEGWKQLSRWGARHGVVALGYDPSYGASRR----LVQYTVN 133

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL            ++T  + + L    + H       F   ++  +     +     G 
Sbjct: 134 YLYGPSSGLTSCPVAMTDGAALILSQQLQQHSFPEDHPFRVVFN--HLTSRNEDFWTSGQ 191

Query: 201 GLTEKRGGTDIAAITSQGQKI------------------SDGIYCLSGHKWFLSSPMSDA 242
            +TE+ GG+D+    +                        +G Y +SG K+F S+  ++ 
Sbjct: 192 WMTERAGGSDVQNTETWATHDPLPASSSTTSNNNPLGTLGEGEYSISGFKFFSSATDANV 251

Query: 243 FIMLAQV--EGRVGCFLVPRLL--------EDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
            ++LA+    G++  FL P                NG+   RLK K+G +   T ELE  
Sbjct: 252 TLLLAKTAPSGKLSTFLAPLRRTITPPNQAPREVTNGVRIHRLKTKLGTKELPTAELELR 311

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
           +    L+G  +     +  +  +    + I S+   R +L+ A  ++R R   G  L   
Sbjct: 312 DMRAHLVGQRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARSFSRARSTVGEPLWLI 371

Query: 353 PVMKRAIADIALDIAAATALSFR------------LANSFDEAKSRSEEAAYARI-MAPI 399
           P+  R +A++ +   AA  L F                       +  EA      +  +
Sbjct: 372 PMHLRLLAEVEVRQRAAMQLGFFTVGVMGVVENPGATAEVPGHVPKGAEATVVFRALTAV 431

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDV 454
           +K    KMA   I E  E +GG GY++     E +++R  R +  NSI  G+ N +  ++
Sbjct: 432 SKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTNVLASEM 491

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKGL--------ARFLT 505
           +  L    N F    + +E+ LG   G+K+   LR + +  K              R + 
Sbjct: 492 VRFLLARDN-FAVFAAWVERVLGMIRGEKLAQALRMAWTAFKGKVARDVASVLADGRRVM 550

Query: 506 EKIALASSAAALYRAG-------MNDIADVFL 530
             +A     A L             ++A  ++
Sbjct: 551 FTLAWILMGALLALDAERDGDAVAAEVARRWI 582


>gi|171320424|ref|ZP_02909459.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171094342|gb|EDT39414.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 395

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 128/364 (35%), Gaps = 31/364 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             AR           +MS  S      +    
Sbjct: 56  REMGEVGLLGPTIPEEYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ + E+                 GLTE   G+D   + ++ +K+  G  
Sbjct: 116 SDAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGGMVTRAKKVPGGYS 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A++E   G   +   + +    GL    +  K+G R++ T
Sbjct: 163 LSGAKMWITNSPIADVFVVWAKLE-ENGKDAIRGFILEKGWKGLSAPAIHGKVGLRASIT 221

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----- 341
            E+     F     + N+             L+SA   ++   +  AE+  +  R     
Sbjct: 222 GEIVLDEVFVP---EENLLPNVSGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLD 278

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K
Sbjct: 279 RQQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITSIMK 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  +  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + G
Sbjct: 332 RNSCGKSLDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTG 390

Query: 462 TNLF 465
              F
Sbjct: 391 IQAF 394


>gi|226944579|ref|YP_002799652.1| glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226719506|gb|ACO78677.1| Glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 395

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 132/398 (33%), Gaps = 40/398 (10%)

Query: 69  TAQELARMANYN--TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A       +L        R ++ +       +       GL  +    ++  
Sbjct: 22  ETERMVRDAARAYCQEKLAPRIQEAFRQERTD-----REIFAEMGELGLLGATIPEAYGG 76

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                      AR           +MS  S      +    T    + + P++ S E+  
Sbjct: 77  AGMNHVCYGLIAREVERVDSGYRSMMSVQSSLVMLPINEFATQAQKEKYLPRLASGEW-- 134

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D   + ++ +K   G        W  +SP++D F++
Sbjct: 135 -----------VGCFGLTEPNFGSDPGGMATRARKADGGYRLSGSKTWITNSPIADVFVV 183

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   + +    GL    +  K+G R++ T E+     F          
Sbjct: 184 WAKTDDGR----IRGFILEKGWQGLSAPAIHGKVGLRASITGEIVMDEVFVPEENMFPEV 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
           +G          L+SA   ++   +  AE     A  Y   R   G  L    ++++ +A
Sbjct: 240 SGLK---GPFTCLNSARYGIAWGALGAAEFCYETARQYTLDRAQFGRPLAANQLIQKKLA 296

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +IA       R+    DE  +  E          I K   C  +  +   A + +G
Sbjct: 297 DMLTEIALGLQACLRVGRLKDEGNAPVEA-------TSIIKRNSCGKSLDIARMARDMLG 349

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 350 GNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAI 387


>gi|218515203|ref|ZP_03512043.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
          Length = 395

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 129/367 (35%), Gaps = 36/367 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSV 156
              PA    +      GL        +        A+ + A  +  +       +   S 
Sbjct: 51  RTDPAIFREMG---ELGLLGPTISPDYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSS 107

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +      + PK+ + E+                 GLTE   G+D  ++ +
Sbjct: 108 LVMVPIDTFGSEAQKLKYLPKLAAGEW-------------IGCFGLTEPDHGSDPGSMAT 154

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + +K+  G        W  ++P++D F++ A+ E      L+   + +    GL    + 
Sbjct: 155 RAKKVDGGYSLTGSKTWISNAPIADVFVVWAKTEDG----LIRGFILEKGWKGLSAPAIH 210

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
            K+G R++ T E+     F     + N+  G          L+SA   ++   +  AE  
Sbjct: 211 GKVGLRASITGEVVMDGVFVP---EENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDC 267

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  Y   R   G  L    ++++ +AD+A +I+       RL    +E     E   
Sbjct: 268 YARARQYTLERKQFGRSLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE--- 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               +  I K   C  A  +   A + +GG+G  +E  IARH       +   G+ +   
Sbjct: 325 ----LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHA 380

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 381 LIIGRAI 387


>gi|114771220|ref|ZP_01448640.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
 gi|114548145|gb|EAU51032.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
          Length = 386

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 105/287 (36%), Gaps = 16/287 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-S 240
           E       P  K  +   L +TE   G+D+  +           + ++G K F+S    +
Sbjct: 104 EQIERYLLPAVKGEITDALAMTEPDAGSDVRGMKCSAISDGSD-WIINGSKHFISGAEHA 162

Query: 241 DAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           D FI+          R     +   L D    G   +   N + ++      L+F N   
Sbjct: 163 DFFIVFVATGVDETPRGPKKRITTFLVDRGTKGFEVRNGYNSVSHKGYKNCILDFDNCRL 222

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG+++     + +      +  A  SV   R     A++YA  R   G  +    
Sbjct: 223 PKEAVLGEIDGGFAVMNEWLYATRITVAAFSVGRARRCFDYALNYAAERKQFGQAIGKFQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   IAD+  DI AA  L+ + A   D+ +  + E           K +  +   +V  
Sbjct: 283 GVGFQIADMITDIDAADLLTLKSAWMLDQGQPSNRE-------IASAKVFASETLASVTD 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 336 KTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRELLR 382


>gi|73537705|ref|YP_298072.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121042|gb|AAZ63228.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 387

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 130/377 (34%), Gaps = 27/377 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P   + ++ +  P  H L+   I  G    +   +   +                 
Sbjct: 28  ETFTPHIRQAERDKRFP--HELMTGLIDFGYFGGVLPEADGGLGLDYLTWAVMMEEAGYC 85

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L    L++     + ++    T    + +   +   E  P              + ++E
Sbjct: 86  WLSLRILINGLNIVSGIINAYGTEVQKERFVRPLLRNERKP-------------FVSISE 132

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+++A + ++  K  D         W  +   +D  I++A+         +   L +
Sbjct: 133 PDVGSNVAEVKTRADKKGDRYVLNGSKLWVTNGMFADFGIVVARTYSETCNGELSLFLVE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
                   + + + +  RS  T    F N       L+G        +        L+ A
Sbjct: 193 RDVTKYTAEPV-DVMFTRSTGTAAFTFENAEIPAANLIGVEGQGLRQILIGLNFGRLNVA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +V   + +L  ++ Y  +R   G  +    ++++ I D+ + + A+ +L +R A S  
Sbjct: 252 MGAVGAAQCALDLSVDYVLQRKQFGRQIGSFQLIQKHIVDMTMRVQASRSLGYRAARSMQ 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              SR+E          I K +  + A  V   A++  GG GY  E  I R +R++    
Sbjct: 312 NGTSRTE--------CSIAKLYATEAAFEVSNLALQVHGGIGYATEYPIERIFRDTRGGM 363

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     L +   +
Sbjct: 364 IPEGTTEIQTLIIAREI 380


>gi|15966004|ref|NP_386357.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti
           1021]
 gi|307314889|ref|ZP_07594480.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
 gi|15075274|emb|CAC46830.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021]
 gi|306898926|gb|EFN29574.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 386

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 98/286 (34%), Gaps = 14/286 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +       P  +      L +TE   G+D+  +    +   D         +   + ++D
Sbjct: 104 DQRERYLLPAVRGDKFDALAMTEPDAGSDVRGMKCFARPDGDDWIVNGTKHFISHADIAD 163

Query: 242 AFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
             I+          R     +   L D    G   +   N + +R      L F +    
Sbjct: 164 FVIVFIATGEEQTPRGPKKKITCFLVDRGTPGFEIREGYNSVSHRGYKNCILTFDDCRLP 223

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG+++       D      L  A  SV   R +   A+ YA  R   G  +     
Sbjct: 224 SAQILGEVHKGFDIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+  +I AA  L+   A   D+    + E           K +  +M   V  E
Sbjct: 284 VSFKLADMITEIDAADLLTLSAAWRLDQGLPSNRE-------IASAKVFATEMLARVTDE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 337 AIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|219669475|ref|YP_002459910.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
 gi|219539735|gb|ACL21474.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 412

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/411 (19%), Positives = 141/411 (34%), Gaps = 30/411 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +E AR      P+           +KV +   +  L+       L    +   +     +
Sbjct: 15  EEAARFVKEKVPKQLIL---AMDEEKVIYPKEY--LMDLG-QARLLGLRFAERYSGRGLQ 68

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              ++       +       L S        +    +  +   +               P
Sbjct: 69  WVDEVSVLEEIGVLGTSLACLYSLPSIVGEAINHFGSEVLKDRYLK-------------P 115

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
             +  +     LTE RGG+D    T+  ++  D +Y L+G K F+     +D F++ A+ 
Sbjct: 116 TLEGKLYTAEALTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKT 174

Query: 250 EGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           +        +   + D  P G+  + +   +G R      + F +        L V  G 
Sbjct: 175 DPEGPAHQSISAFIVDRGP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGA 233

Query: 309 ---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 M I   L SA  ++   R +L  A  Y+ RR   G  + D   +   +AD    
Sbjct: 234 ADIFYQMMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITR 293

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA +L +  A + D           AR +    K +    A AV+ + M+ +GG GY 
Sbjct: 294 LDAARSLVYTTARAVDSGVPGHV----ARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYT 349

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
               I R  R+     I  G+   M L + +   K      Q   +LE+D 
Sbjct: 350 NVFPIERLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNLQFHRSLEEDA 400


>gi|262281601|ref|ZP_06059379.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262256977|gb|EEY75717.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 385

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 139/398 (34%), Gaps = 28/398 (7%)

Query: 67  SCTAQELARMANYNTP-QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           +   + L R A      +L+   P    W++    P  H + ++    GL          
Sbjct: 4   TAEHEALRRTARQFVENELNPNIP---EWEEAGRFP-IHNVFKKMGDLGLLGICKPEENG 59

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYD 184
            +    ++ +  A        E G      V  A  V   M TP + +        +E  
Sbjct: 60  GLALDYSYNLVVAE-------EIGRAACGGVPLAIGVQTDMATPALARFG-----RKELR 107

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                P         + ++E   G+D+AAI +  +K  D         W  +S  +D F 
Sbjct: 108 DEFLTPAIAGEYVASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFC 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             ++      G+ +    NK+G RS  T ++   N        +  
Sbjct: 168 LLANTSDDKPHVNKSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGA 227

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +             L +   S+ G+   + + I Y + R   G  LI+   +    A+
Sbjct: 228 EGMGFMMQMMQFQEERLWACANSIGGLETLIQKTIAYTKERTTFGQPLINNQYIHFRFAE 287

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A  AL+++        +          ++A + K    ++   V    ++  GG
Sbjct: 288 LMTEVEALKALTYQACEQHIAGED-------VSMLASMAKLKSGRLTREVADSCLQYWGG 340

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +G++ +   ++ YR+    SI  G+   M+  +  L++
Sbjct: 341 NGFMWDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378


>gi|322493339|emb|CBZ28625.1| putative acyl-CoA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 629

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 84/472 (17%), Positives = 162/472 (34%), Gaps = 55/472 (11%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +     G         +       +       +   A          S+
Sbjct: 101 VTTPNGFKEAYQALTAGGWTGINEAEKYGGQGLPLSVGFTTREMIATANWGFSMYPGLSL 160

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +  +   + PK+ S E+  T             + LTE + GTD++ + +
Sbjct: 161 GACRTLMSWASDEMKDQYLPKLVSGEWSGT-------------MCLTEPQCGTDLSQVKT 207

Query: 217 QGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLE- 263
           + +   DG  Y +SG K F+S+   D       ++LA++         +  FLVPR +  
Sbjct: 208 KAEPSGDGKSYRISGTKIFISAGDHDLTDNIIHVVLARLPNSLPSTKGLSLFLVPRHVVN 267

Query: 264 -DGSPNG---LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            DGS      +    L+ K+G + ++T +L F N+ G+L+G+ +     +        + 
Sbjct: 268 DDGSLEAARNVECIALEKKMGIKGSSTCQLSFQNSVGYLIGEPSAGMKQMFTFMNAARVG 327

Query: 320 SAIMSVSGMRVSLAEAIHYARRRH---VSGG---------ILIDQPVMKRAIADIALDIA 367
            A+  +    ++    + YAR R      GG          +I    +++ +        
Sbjct: 328 CALEGICHAELAFQNGLRYARERRSMRALGGTKEPEMVADRIICHANVRQNVLFAKAIAE 387

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL   +    D   +  + A             PI K    +      +  ++  GG
Sbjct: 388 GGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKACVTEWGVEAASRLLQVWGG 447

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGS 478
            GYI+   + +  R+S   +I  G+     LD +    L  KG N  ++    + + L  
Sbjct: 448 HGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTKGGNQAKRFGKRVSK-LAW 506

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
           +       L          +   R +T +I L    A   R      ++ FL
Sbjct: 507 AHMLSTGALGRYGRQLWLMQKQWRIVTTRIGLM---ALKNRDAAAASSEDFL 555


>gi|329898468|ref|ZP_08272409.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328920820|gb|EGG28269.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 399

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 112/310 (36%), Gaps = 30/310 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      +    T    + + PK+ + E+                 GLTE   G+D
Sbjct: 107 LSVQSSLVMYPIYAFGTEEQREKYLPKLATGEW-------------IGCFGLTEPDYGSD 153

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ + +  G        W  +SP++D F++ A+ +       +   + +    GL
Sbjct: 154 PGGMITRARSVEGGYRLSGAKMWISNSPIADVFVVWAKTDDGQ----IRGFILEKGMPGL 209

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              +++ K+  R++ T E+   + F     LL ++    GP   +  +     A  ++  
Sbjct: 210 SAPKIEGKLALRASITGEIVMEDVFVSEEQLLPNVKGLKGPFSCL-NMARYGIAWGALGA 268

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSR 386
                  A  Y   R   G  L    +++  +AD+  DIA      FR      D+    
Sbjct: 269 AETCWQTARAYTLERSQFGRPLAANQLIQLKLADMQTDIALGLQGCFRAGQQLCDDG--- 325

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  +  + K   C  A  +  +A + +GG+G  ++  + RH       +   G+
Sbjct: 326 -----IAPELISLIKRNSCAKALHIARQARDMLGGNGISDQYPVMRHMMNLEVVNTYEGT 380

Query: 447 GNAMVLDVLN 456
            +   L +  
Sbjct: 381 SDIHALILGR 390


>gi|259417653|ref|ZP_05741572.1| short-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
 gi|259346559|gb|EEW58373.1| short-chain specific acyl-coa dehydrogenase [Silicibacter sp.
           TrichCH4B]
          Length = 387

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 124/369 (33%), Gaps = 40/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-- 161
             +  ++I  GL+ +                      +LM + E G        +     
Sbjct: 43  KEIQTKAIEAGLYAANMPEEVGGAGLDT-------LTWLMYEKELGRANYALHWTGVARP 95

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +               P  +      L +TE   G+D+  +T+  +
Sbjct: 96  SNILLAGTEEQKEKYL-------------FPCIRGEKWDCLAMTEPGAGSDLRGMTASAR 142

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQR 274
              D  + L+G K F+S    +D  I+          R     +     D    G   + 
Sbjct: 143 TDGDD-WILNGTKHFISHADVADFAIVFMATGEEETPRGKKKKITAFFVDKGTPGFTVRD 201

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               + +R      LEF +       +LG++N              L  A   +     +
Sbjct: 202 GYRNVSHRGYTNQVLEFDDCRLPSSAVLGEVNKGFEVANTWLGATRLQVAATCLGRAERA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A+ YA  R   G  +     +   +AD+A ++ AA  L++     FD+      + +
Sbjct: 262 LQHAVEYAAERKQFGQQIGKFQGVSFKLADMATELKAANLLTWEAGWKFDQGTVTESDMS 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A        +M   V  EA++  GG G ++E  + R +R++    I  G+     
Sbjct: 322 MAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQR 374

Query: 452 LDVLNLLEK 460
             +   + +
Sbjct: 375 HIISREMLR 383


>gi|163734821|ref|ZP_02142259.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161391926|gb|EDQ16257.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 381

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 124/364 (34%), Gaps = 24/364 (6%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E     HA L+     G+  +    +F          +RA  +           ++    
Sbjct: 36  ETSNFVHAQLKVLAEAGMMGANLPEAFGGSDISAPALLRAVEIVAGGCGSTASALTAHFL 95

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++  + +  T      W PK+ + E                   LTE   G+D A + ++
Sbjct: 96  ASDSILIGGTEAQKAHWLPKVATGE-------------ALGAFALTEPSAGSDPAYMKTR 142

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  DG +      +  +  ++D  I+ A  +       +   +      G      + 
Sbjct: 143 ATREGDGWHLRGSKCFISNGGVADILIVFAVTDPAARHRGISAFILPKHTPGFTAGPAEK 202

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            +G +      L   +        L    +G    MK+L    ++ A   +   + +L  
Sbjct: 203 TMGLKGGHVFSLTL-DCHLPAEALLGEKGSGFRTAMKVLDNGRVEVAAQCIGMAQAALNA 261

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R + G  L  +  ++  +AD+ALD+  A  ++   A   D     SE AA A+
Sbjct: 262 AKAYASDRVIGGEALSAKQGIRWMLADMALDLYGARLMALEAARQRDTGARFSEAAAMAK 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A        + A  V   A++  GG GY  +  I R  R+     I  GS       +
Sbjct: 322 LKA-------SEAADRVADAALQIHGGYGYTRDFPIERLTRDLRIMRIYEGSSEIQRNII 374

Query: 455 LNLL 458
              L
Sbjct: 375 AGHL 378


>gi|316971737|gb|EFV55477.1| putative acyl-CoA dehydrogenase [Trichinella spiralis]
          Length = 456

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/428 (16%), Positives = 142/428 (33%), Gaps = 54/428 (12%)

Query: 66  LSCTAQELARMA-----NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LS  A+E    A         P+   +   GE       +P    +++ +   GL  +  
Sbjct: 42  LSAEAKEFQNTAMKFAKEEIIPKAAHFDRTGE-------YPM--EIIKNAWKLGLSGTEI 92

Query: 121 DRSFE-------------PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
            + +               +       +  A             +  +  +   V L + 
Sbjct: 93  PQQYGSNNAVLICSCLLGGLGLSLLESVVIAEALSYGCTGISTAIMGNGLAVRAVLLFSC 152

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTS--VAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
             +    AP I +      NK   + T   +     +TE   G+D+A + ++  K  D  
Sbjct: 153 FYLIAQEAPVIIAGNEAQKNKFLRRMTEEPLLAAYCVTEPGAGSDVAGVKTKLTKKGDEY 212

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV---PRLLEDGSPNGLCYQRL------K 276
                  W  +   ++ F +LA+               LL +G   G+   +       +
Sbjct: 213 ILNGQKMWITNGGYANWFFVLARSHPDPDAPASQAFTALLVEGDSKGVVRGKKATLLVVE 272

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRV 330
             +G R + T  + F +         N+        KI++   D         +V     
Sbjct: 273 WNMGQRCSDTRGISFEDVIVP---KENILGEMGTGFKIVMGAFDRTRPGVAAAAVGLAWR 329

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++ EA  YA  R   G  +     +   +AD+A+ +  A  ++++ A   D  +  S   
Sbjct: 330 AMDEAKKYATERRTFGVPIAHHQSIAFMLADMAIGVETARMITYKSAWETDCGRRNS--- 386

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A I K +   +A     +A++ +GG+G+  E  + +  R++    I  G+    
Sbjct: 387 ----YCASIAKAYASDVANKCATDAVQILGGNGFNSEYPVEKLMRDAKIFQIYEGTSQIQ 442

Query: 451 VLDVLNLL 458
            L +   L
Sbjct: 443 RLIISRQL 450


>gi|218781176|ref|YP_002432494.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762560|gb|ACL05026.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 601

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 74/485 (15%), Positives = 170/485 (35%), Gaps = 66/485 (13%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           V  E + L + ++    +E+    + N P+L            +  H     +L      
Sbjct: 41  VLAEADKLAKKMMRPILEEM----DRNPPELED--------GSIRVHDDVRKILDECGKG 88

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G   +                     ++  A   A      +  ++ ++    +  + + 
Sbjct: 89  GWITASKPVDHGGDQLPLMITDSCQYIFCAANYSAAVYPGLNAGASHLIEEFGSEDLKET 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P + +  +  T             + LTE   G+ ++ + +  +   +G Y + G K 
Sbjct: 149 YLPNLHNGTWQGT-------------MALTEPGAGSSLSDLETSAEPTEEGYYLIRGQKI 195

Query: 234 FLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLEDG---------SPNGLCYQRLKNK 278
           F+S+   +       +MLA+++G   G   +   +             PN +    + +K
Sbjct: 196 FISAGDHNCVDNVVHLMLAKIKGGPPGVKGISLFVVPKFRPALGGGLEPNDVVASGVYHK 255

Query: 279 IGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R     +L      N  G+L+G+ +     +  M     L   + + +    +   A
Sbjct: 256 MGYRGAPIAQLSMGDGDNCRGWLVGEPHKGLFYMFQMMNEARLGVGLGATAIASAAYYAA 315

Query: 336 IHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + Y R R                 +I+   ++RA+      I  + +L  +     D  +
Sbjct: 316 LEYCRERRQGRKIGQKDPTQPQVPIIEHADIRRALLFQKAIIEGSHSLLLQGCKYADMMR 375

Query: 385 SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + E          ++ P+ K +  +M    +++ ++C GGSGY ++  + ++YR+   
Sbjct: 376 VTTGEEQERYSLLLDLLTPVAKTYPSEMGIQAVSQGLQCFGGSGYCDDYPLEQYYRDMRI 435

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ-----DLGSSGKKVITILRDSIS 492
           + I  G+     LD+L   ++ K    F      + Q     +  S  K     L+ ++ 
Sbjct: 436 HPIHEGTTAIHGLDILGRKVVMKEGKAFAIFKQEVLQTVQNAEADSELKGFGGKLKAALE 495

Query: 493 LCKED 497
           +  + 
Sbjct: 496 VLDDA 500


>gi|126640779|ref|YP_001083763.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 375

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 31/365 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 33  REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG 92

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 93  TEEQKQKYLPKLATGEY-------------IGCFGLTEPDHGSDPGSMITRAKKVEGGYR 139

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + +    GL    +  K+G R++ 
Sbjct: 140 LTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASI 199

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YAR 340
           T E+   N F           G          L+SA   ++   +  AE        Y  
Sbjct: 200 TGEIVMDNVFVPEENAFPEIRGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTM 256

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R     DE  +  E          + 
Sbjct: 257 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVE-------GTSLI 309

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 310 KRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 368

Query: 461 GTNLF 465
           G   F
Sbjct: 369 GIAAF 373


>gi|294633092|ref|ZP_06711651.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830873|gb|EFF89223.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 598

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/561 (16%), Positives = 180/561 (32%), Gaps = 74/561 (13%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWD- 95
             D LL   +                            +A  +  P          R+D 
Sbjct: 10  DLDFLLYEWLDVESLTARPRFADHSRETFDAALDLSETIATRHFAPHNKKNDAEEPRFDG 69

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V   P     LR     GL     D     +             +  A +        
Sbjct: 70  TRVHIIPEVGKALRVFADAGLIGGAMDAEVGGMQLPGVVADACFAWFQAANVGTAAYPFL 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++    +      +               PM +      + L+E + G+ +A +
Sbjct: 130 TIGNANLLLAHGSSEQIDTYV-------------RPMVEGRFTGTMCLSEPQAGSSLADV 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPRLLE 263
            ++ +   DG Y L G+K ++S    +       ++LA++ G          F+VP+ L 
Sbjct: 177 RTRAEPAGDGAYRLFGNKMWISGGDHELTENIVHLVLARIPGGPPGVKGLSLFIVPKYLV 236

Query: 264 -----DGSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGP 308
                 G  N +    L +K+G R      L F              G L+G+ +     
Sbjct: 237 GPDGTPGERNDVVLAGLNHKMGYRGTTNTLLNFGEGGFRPGGAPGAVGHLVGEPHRGLAY 296

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKR 357
           +  M     +   + + +        A+ YAR R                 +I+   ++R
Sbjct: 297 MFHMMNEARIGVGLGATALGYTGYLHALDYARTRPQGRPVTAKDAAAPQVPIIEHADVRR 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAV 411
            +      +  A AL        DE ++ + E           ++ PI K W  +     
Sbjct: 357 MLLAQKSYVEGALALILYCGRLLDEQRTAATEQERDRARLLLDVLTPIAKSWPSQWCLEA 416

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469
              A++  GG GY  E  + + YR++  N I  G+     LD+L   ++  G      L 
Sbjct: 417 NNLAIQVHGGYGYTREYDVEQFYRDNRLNPIHEGTHGIHGLDLLGRKVVADGGAALGLLA 476

Query: 470 STL----------EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
            T+          + +L   G+++   L   +++             + ALA+++  L  
Sbjct: 477 ETISATTARAAAAQGELAELGRRLDAALARIVTVTGRLWADGD---PQTALANASVYLEA 533

Query: 520 AGMNDIADVFLENRFLDNCHS 540
            G   +A ++LE     +   
Sbjct: 534 VGHTVLAWIWLEQLLAADGRD 554


>gi|254477734|ref|ZP_05091120.1| glutaryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031977|gb|EEB72812.1| glutaryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 406

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 82/432 (18%), Positives = 148/432 (34%), Gaps = 46/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L       P  + ++L    E +++ +A+  A+        L AY       +  E  
Sbjct: 13  PDLGKFNWEDPLRLDEQLTED-ERMIAASARSYAQE-KLQPRILSAY-------ENEETD 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSA 159
           P    + R     GL  +     +  +          AR           +MS  S    
Sbjct: 64  P---EIFREMGEMGLLGTTIPEEYGGLGAGYVSYGLVAREVERVDSGYRSMMSVQSSLVM 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + PK+ S E+                 GLTE   G+D A + ++ +
Sbjct: 121 YPIYAYGSEEQRQKYLPKLSSGEW-------------IGCFGLTEPDAGSDPAGMKTRAE 167

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K   G        W  ++P++D F++ A+ E   G   +   + +    GL   ++ NK 
Sbjct: 168 KTDGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPKIGNKA 225

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+             +     VE +K     L+ A   +S   +  AE   +
Sbjct: 226 SLRASITGEIVMDGVEV----GEDALLPHVEGLKGPFGCLNRARYGISWGAMGAAEFCWH 281

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L +  + +  +A++  +I      S ++    D A +       A
Sbjct: 282 AARQYGLDRKQFGRPLANTQLFQLKLANMQTEITLGLQASLQVGRLMDAANA-------A 334

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L 
Sbjct: 335 PEMISIVKRNNCGKALEIARNARDMHGGNGISLEFGVIRHMVNLETVNTYEGTHDVHAL- 393

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 394 ILGRAQTGLQAF 405


>gi|299067684|emb|CBJ38893.1| dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 397

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 131/367 (35%), Gaps = 30/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     G+        +             AR           +MS  S      + 
Sbjct: 54  AIFREMGALGMLGPTIPEQYGGPGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIH 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E+                 GLTE   G+D A++ ++ +K+  
Sbjct: 114 AFGSEAQKQKYLPRLATGEW-------------IGCFGLTEPNHGSDPASMVTRAKKVDG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP+++ F++ A++    G   +   + +    GL    +  K+G R+
Sbjct: 161 GYSLSGTKMWITNSPIANVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPVIHGKVGLRT 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+  G          L+SA   ++   +  AE+  +  R  
Sbjct: 221 SITGEIVLDEVFVP---EENLMPGVHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQY 277

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    D+  +       A  +  
Sbjct: 278 VLDRTQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDDGTA-------AVEITS 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  + RH       +   G+ +   L +L   
Sbjct: 331 IMKRNSCGKALDIARMARDMLGGNGISDEFGVIRHVVNLEVVNTYEGTHDIHAL-ILGRA 389

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 390 QTGIQAF 396


>gi|260554906|ref|ZP_05827127.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411448|gb|EEX04745.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 607

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/519 (18%), Positives = 180/519 (34%), Gaps = 87/519 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       L A          
Sbjct: 71  ERVTVNPEVGVALKAFADAGLMSAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P   K +   +   +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGEPEKVKPYVNAMIEGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++  K  DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 178 RTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVP 237

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D +      N +    + +K+G R      L F              G L+G+   
Sbjct: 238 RKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              LI  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRVQ-GRSRSERNPSSPQIPLIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      ++ A AL    A   D+      A+  ++      ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQSNQAHQLLDLLTPVVKSWSSE 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L    +      
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLS 476

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALAS 512
              L E++ +T+ Q       K    L+D      +   L R +TEK        + LA+
Sbjct: 477 MKLLHEKIMNTIAQA------KAEPSLKDHADQLDQKWQLIRNVTEKLHALTDVELQLAN 530

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +A  L   G   +  ++L     D     H ++    + 
Sbjct: 531 AANYLEAFGHLVVGWLWL-----DQAVVIHKLMPNSTDP 564


>gi|89895064|ref|YP_518551.1| hypothetical protein DSY2318 [Desulfitobacterium hafniense Y51]
 gi|89334512|dbj|BAE84107.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 424

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 80/411 (19%), Positives = 141/411 (34%), Gaps = 30/411 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +E AR      P+           +KV +   +  L+       L    +   +     +
Sbjct: 27  EEAARFVKEKVPKQLIL---AMDEEKVIYPKEY--LMDLG-QARLLGLRFAERYSGRGLQ 80

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              ++       +       L S        +    +  +   +               P
Sbjct: 81  WVDEVSVLEEIGVLGTSLACLYSLPSIVGEAINHFGSEVLKDRYLK-------------P 127

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249
             +  +     LTE RGG+D    T+  ++  D +Y L+G K F+     +D F++ A+ 
Sbjct: 128 TLEGKLYTAEALTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKT 186

Query: 250 EGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
           +        +   + D  P G+  + +   +G R      + F +        L V  G 
Sbjct: 187 DPEGPAHQSISAFIVDRGP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGA 245

Query: 309 ---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                 M I   L SA  ++   R +L  A  Y+ RR   G  + D   +   +AD    
Sbjct: 246 ADIFYQMMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITR 305

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + AA +L +  A + D           AR +    K +    A AV+ + M+ +GG GY 
Sbjct: 306 LDAARSLVYTTARAVDSGVPGHV----ARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYT 361

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
               I R  R+     I  G+   M L + +   K      Q   +LE+D 
Sbjct: 362 NVFPIERLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNLQFHRSLEEDA 412


>gi|262203693|ref|YP_003274901.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087040|gb|ACY23008.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 386

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 122/359 (33%), Gaps = 23/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R +   GL                      A  +  A    G   S      ++  
Sbjct: 43  RDLHREAAKLGLFGLGVPEDVGGSGGDLIDSSILAEEFHYAGAAGGVFASLFTHGIALPH 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L+          P    R   PT             L +TE  GG+D+  + +   +  D
Sbjct: 103 LIGAAD------PDQIDRWVRPTL-----AGEKIGSLAITEPDGGSDVGHLRTSAVRDGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             Y ++G K +++S +   F++ A   G  G   V  L+ D    G    R   K+G RS
Sbjct: 152 H-YVVNGAKTYITSAVRADFVVTAVRTGGPGAGGVSLLVIDKDTPGFTVTRRLEKMGWRS 210

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F +       L+G  N     +    +      A+ + +  +  L   + + R
Sbjct: 211 SDTAELSFVDARVPVTNLVGAQNSGFAQIAAAFVTERSGLAVQAYASAQRCLDLTLAWVR 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPI 399
            R   G  LI +  ++ ++ ++A  I  A   +  +             E  +A+  A  
Sbjct: 271 DRQTFGKPLIARQSVQDSLTEMARRIDIARTYTRAVVERKVTSGDDLIAEVCFAKNTAVE 330

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           T  W       V  +A++  GG GY+    + R YR+     I  G+   +       L
Sbjct: 331 TGEW-------VADKAVQLFGGLGYMTGTEVERQYRDMRIIGIGGGTTEILSGLAAKRL 382


>gi|221069608|ref|ZP_03545713.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714631|gb|EED69999.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 382

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 133/422 (31%), Gaps = 57/422 (13%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
             D  +   +A F       L             E A  A  + P L   G  G    + 
Sbjct: 10  EEDQAVADAVARFAEETLAPLAQ--------AMDEEAFSATRHVPGLSTLGVMGMNLPE- 60

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
                                   R   P V   A  +    +   A      ++     
Sbjct: 61  ------------------------RFGGPGVTPTAMLMSLVAISR-ACAATSSMIGAHYL 95

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +       + W P+  S E+                  LTE RGG+  A + ++
Sbjct: 96  GTDAVLIGGDEAQREQWLPRCASGEW-------------LAAFALTEPRGGSHPADMRTR 142

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  D         +  ++  +   ++ A+ +       V   +      G+     + 
Sbjct: 143 AVRDGDDYLITGVKHFISNAAEARFMVVFAKTDAEAAARGVSAFIVPRDLPGIQISSPEK 202

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            +G R     E+            L    TG    MK+L    LD A  S+     +L  
Sbjct: 203 LMGIRGGHAFEVSLDGVRVPAANRLGAEGTGFKTAMKVLDNSRLDVAATSLGIAEAALKA 262

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  +A +R V G  +  +  ++  +AD+ L + AA  L+ +      + +  ++++A A 
Sbjct: 263 AAGWANQRMVGGEPIASKQGIQFKLADMKLRLEAAWGLTMQALALRQQGQPFTQQSAMA- 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K +  +M   V  EA++  GG GY  E  + R+ R++    I  GS       +
Sbjct: 322 ------KLFASEMVSFVTDEALQIHGGYGYTREMPLERYVRDARILRIYEGSSEIQRTII 375

Query: 455 LN 456
             
Sbjct: 376 AR 377


>gi|41406248|ref|NP_959084.1| FadE25_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118465842|ref|YP_879440.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773189|ref|ZP_05214705.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41394596|gb|AAS02467.1| FadE25_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167129|gb|ABK68026.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 403

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 130/391 (33%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+                       L+       
Sbjct: 28  PAAAEWDEREETP--WPVIQEAAKVGLYSPDLFAQQAAEPTGLGMLTVFEELF-WGDAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A+ +A   TP     W P++F    +P                 +E   G
Sbjct: 85  ALSIMGTGLAAAALAGNGTPEQLGRWLPEMFGTADEP----------KLGAFCSSEPDAG 134

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++ +               W  +  +++  I++A V   +G       +    
Sbjct: 135 SDVGAIRTRARYDEATGEWVLNGTKTWATNGGIANVHIVVASVYPELGARGQATFVVPAG 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----------- 315
             GL   +   K G R++ T E+   +    L  D  +      + +I            
Sbjct: 195 VKGLAQGQKFKKHGIRASHTAEVVLDDVR--LPADHILGGREKFEERIARVKSGASARGQ 252

Query: 316 --------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                          M+V   R +   A+ YA +R   G  + +   +   +AD+   I 
Sbjct: 253 AALKTFERTRPTVGAMAVGVARAAYEYALEYACQREQFGRKIGEFQAVAFKLADMKCRID 312

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R        +      A+      + K    + A  V  EA++ +GG+GY  +
Sbjct: 313 AARMLVWRAGWMARNNQ------AFDAAEGSMAKLVASETAVYVTDEAIQILGGNGYTRD 366

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R++   +I  G+     L +   L
Sbjct: 367 YPVERMHRDAKIFTIFEGTSEIQRLVISRAL 397


>gi|330822830|ref|YP_004386133.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308202|gb|AEB82617.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 387

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 148/382 (38%), Gaps = 33/382 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMA 144
             P  + W+  E  PA H L ++    G        ++  +    ++ + AA    +  A
Sbjct: 22  IDPFVDEWEANEIFPA-HELFKKMGRLGFLGITKPEAYGGMGLDFSYALAAAEAIGHARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q     +   S  +   +A   +  + +++              AP     V + +G++E
Sbjct: 81  QGVGMGIGVQSNMATPALAAFGSDELKREFL-------------APAIAGDVVVSIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVP 259
           +  G+D++++ ++ ++  D         W  +   +D   +L               +VP
Sbjct: 128 QGAGSDVSSLKTRARRDGDDYVISGSKMWITNGTQADWICLLCNTSDGPVHKNKSLIVVP 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+  Q++K K G  S+ T ++ F      +   +     G +  MK     
Sbjct: 188 LKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHRIGEEGMGFIYQMKQFQEE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD A   ++ + + + E   Y R+R   G  L+D   ++  +A++  ++ A  +L++R 
Sbjct: 247 RLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQYKLAELKTELEALRSLTYRA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++   +   E       +A + K    ++   +    M+  GG GY  +  ++R YR+
Sbjct: 306 TLAYVNGEDVIE-------LASMAKLKAGRLGREIADWCMQFQGGMGYTWDNRVSRAYRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M++ +   +
Sbjct: 359 YRLGSIGGGADEVMMMVIARKM 380


>gi|110680833|ref|YP_683840.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109456949|gb|ABG33154.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 381

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 124/364 (34%), Gaps = 24/364 (6%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E     HA L+     G+  +    +F          +RA  +           ++    
Sbjct: 36  ETSNFVHAQLKVLAEAGMMGANLPEAFGGSNISAPALLRAVEIVAGGCGSTASALTAHFL 95

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++  + +  T      W P++ + E                   LTE   G+D A + ++
Sbjct: 96  ASDSILIGATEAQKAHWLPRMATGE-------------ALGAFALTEPSAGSDPADMKTR 142

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +  DG +      +  +  ++D  I+ A  +       +   +      G      + 
Sbjct: 143 ATREGDGWHLTGSKCFISNGGVADVLIVFAVTDPTARHRGISAFILPKHTPGFTAGPAEK 202

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            +G +      L   +        L    +G    MK+L    ++ A   +   + +L  
Sbjct: 203 TMGLKGGHVFSLAL-DCHLPAEALLGEEGSGFRTAMKVLDNGRVEVAAQCIGMAQAALDA 261

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R + G  L  +  ++  +AD+ALD+  A  ++   A   D     SE AA A+
Sbjct: 262 AKAYASDRVIGGEALSAKQGIRWMLADMALDLYGARLMALEAARQRDTGARFSEAAAMAK 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A        + A  V   A++  GG GY  +  I R  R+     I  GS       +
Sbjct: 322 LKA-------SEAADRVADAALQIHGGYGYTRDFPIERLTRDLRIMRIYEGSSEIQRNII 374

Query: 455 LNLL 458
              L
Sbjct: 375 AGHL 378


>gi|322500597|emb|CBZ35674.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 629

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 84/475 (17%), Positives = 162/475 (34%), Gaps = 61/475 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +     G         +       +       +   A          S+
Sbjct: 101 VTTPNGFKEAYQALTAGGWTGINEAEKYGGQALPLSVGFTTREMIATANWGFSMYSGLSL 160

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +  +   + PK+ S E+  T             + LTE + GTD++ + +
Sbjct: 161 GACRTLMSWASDELKDQYLPKLVSGEWSGT-------------MCLTEPQCGTDLSQVKT 207

Query: 217 QGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           + +   DG  Y ++G K F+S+   D       ++LA++         +  FLVPR + +
Sbjct: 208 KAEPSGDGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSLPSTKGLSLFLVPRHVVN 267

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                     +    L+ K+G + ++T +L F N+ G+L+G+ +     +        + 
Sbjct: 268 DDGSLEAAKNVECIALEKKMGIKGSSTCQLSFHNSVGYLIGEPSAGMKQMFTFMNAARVG 327

Query: 320 SAIMSVSGMRVSLAEAIHYARRRH---VSGG---------ILIDQPVMKRAIADIALDIA 367
            A+  V    ++    + YAR R      GG          +I    +++ +        
Sbjct: 328 CALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRIICHANVRQNVLFAKAIAE 387

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL   +    D   +  + A             PI K    +      +  ++  GG
Sbjct: 388 GGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKACVTEWGVEAASRLLQVWGG 447

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL---FSTLEQD 475
            GYI+   + +  R+S   +I  G+     LD +    L  KG N  ++     S L + 
Sbjct: 448 HGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTKGGNQAKRFGKRVSKLARA 507

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
              S   +    R    + K+     R  T +I L    A   R      ++ FL
Sbjct: 508 HMLSTGALGRYGRQLWLMQKQW----RIATTRIGLM---ALKNRDAAAASSEDFL 555


>gi|212711030|ref|ZP_03319158.1| hypothetical protein PROVALCAL_02099 [Providencia alcalifaciens DSM
           30120]
 gi|212686198|gb|EEB45726.1| hypothetical protein PROVALCAL_02099 [Providencia alcalifaciens DSM
           30120]
          Length = 378

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 127/372 (34%), Gaps = 26/372 (6%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             +R+D+ E   A    L      G         +                   A     
Sbjct: 27  NAQRYDEEEIFCA--ESLTALGEMGCWGINLPEQYGGFGIGSIAMSMIVEAVAAACASTS 84

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             ++    +   + +  T     DW PK  + E             +    GLTE   G+
Sbjct: 85  SALTAHFLATDSILIGGTEAQKNDWLPKAANGE-------------LLGAFGLTEPAAGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + A + +   + + G        +  ++  +D  ++ A+ +   G   +   +      G
Sbjct: 132 NPADMRTTATRENGGWRIRGNKHYITNAKEADFIVLYAKTDVEAGARGISAFMIPKGTEG 191

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           + +   +  +G R +   EL   N +     LLG+         ++     ++ A  S+ 
Sbjct: 192 VAFSHPEKTMGLRGSTIYELAL-NCWLPESALLGEEGKGFHTAMEVLDKGRVEVAATSLG 250

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R ++   + + + R +    L      +  +AD+   + AA  L++  A   D  +  
Sbjct: 251 IARAAMESTLGWVKERQIGKKPLAAYQGTQWKLADMHTQLEAARMLTWNAAELRDSGQRF 310

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S ++A A       K +  + A  V   A++  GG GYI +  + R+ R++    I  G+
Sbjct: 311 SLQSATA-------KLFAAECAGFVTDAALQLHGGYGYIRDLPLERYVRDARILRIFEGT 363

Query: 447 GNAMVLDVLNLL 458
                + +   +
Sbjct: 364 SEIQKIIISRAV 375


>gi|71990804|ref|NP_491886.2| Acyl CoA DeHydrogenase family member (acdh-4) [Caenorhabditis
           elegans]
 gi|31249876|gb|AAB52476.3| Acyl coa dehydrogenase protein 4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 319

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 105/296 (35%), Gaps = 26/296 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-----LMAQLEAGHLMSPSVTSASMVALM 165
             +GL        +       A    AA +      + A + A   +  ++    ++ L 
Sbjct: 16  FENGLMGIEVPEKYGG---PGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIEL- 71

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T +  + + PK +              TS      L+E   G+D  A+ +  +K  D  
Sbjct: 72  GTEKQKEKYLPKCY--------------TSSVGSFALSETGSGSDAFALKTTAKKDGDDY 117

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  +S  S+ F++ A  +   G   +   + +    G    + ++K+G RS++
Sbjct: 118 VINGSKMWISNSEQSETFLVFANADPSKGYKGITCFIVEKGTKGFTIGKHEDKLGVRSSS 177

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  L F N       +LG+         +      +      +   +    + I Y ++R
Sbjct: 178 TCPLHFDNVRVHKSAILGEFGKGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQTIPYLQQR 237

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              G  +ID   M+  IA +  +I AA  L +  A           EAA A++ A 
Sbjct: 238 EQFGQRIIDFQGMQHQIAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFAS 293


>gi|73538289|ref|YP_298656.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121626|gb|AAZ63812.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 386

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 138/382 (36%), Gaps = 33/382 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMA 144
             P  + W+  E  PA H L ++    G         +  +    ++ I AA    Y  A
Sbjct: 22  IDPHVDEWEAAEIFPA-HELFKKMGDLGFLGITKPVEYGGLGLDFSYAIAAAEALGYARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q     +      +   +    +  + +++              AP     +   +G++E
Sbjct: 81  QGIGMGVGVQCDMATPALTAFGSDALKREFL-------------APAIAGDMVCSIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVP 259
              G+D+A++ ++ ++  D         W  +   +D   +L               +VP
Sbjct: 128 AGAGSDVASLKTRARRDGDDYVITGSKMWITNGTQADWICLLCNTSDGPVHKNKSLIVVP 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+  Q++K K G   + T ++ F      +   +     G +  MK     
Sbjct: 188 LKENGKRVKGVEIQKIK-KFGMWCSDTAQIFFDEVRVPVRNRIGEEGMGFIYQMKQFQEE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L+ A   ++   + + E   Y R+R   G  L+D   ++  +A++  ++ A  AL +  
Sbjct: 247 RLNGAARRLACTAL-IEETAEYLRQRIAFGKPLLDNQFIQFKLAELKTEMEALRALVYVA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++      +E       +A + K    +++  V    M+  GG GY  +   +R YR+
Sbjct: 306 TQTYINGGEVTE-------LASMAKLKAGRLSRDVADWCMQFQGGMGYTWDNHASRAYRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M+  +   +
Sbjct: 359 FRLGSIGGGADEVMLQVIAKQM 380


>gi|170751475|ref|YP_001757735.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657997|gb|ACB27052.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 409

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 129/367 (35%), Gaps = 34/367 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L R+    GL        +        A+ + A  +  +       +   S      +  
Sbjct: 69  LFRKMGELGLLGVTLPEEYGCAGASYVAYGLVARAVEAVDSGYRSMMSVQSSLVMYPIHA 128

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + + PK+ S E+                 GLTE   G+D A + ++ +KI  G
Sbjct: 129 YGSEEQRQKFLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTKAEKIDGG 175

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  ++P +D F++ A+ +   G   +   + +    GL    LK K+  R++
Sbjct: 176 YRISGAKMWISNAPFADVFVVWAKSDAHEGA--IRGFVLEKGMKGLSAPTLKGKLSLRAS 233

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----Y 338
            T E+             +     V  +K     L+ A   +S   +  AE        Y
Sbjct: 234 TTGEIVMEGVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCWHRARSY 289

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +IA     S R+    DE +        A  M  
Sbjct: 290 TLERKQFGRPLAQTQLVQKKLADMQTEIALGLQASLRVGRLMDEGR-------MAPEMIS 342

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  A  +   A +  GG+G + E  + RH +     +   G+ +   L +L   
Sbjct: 343 LVKRNNCGKALDIARTARDMHGGNGIMGEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRA 401

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 402 QTGLQAF 408


>gi|221120553|ref|XP_002165738.1| PREDICTED: similar to acyl-CoA dehydrogenase (3J649) [Hydra
           magnipapillata]
          Length = 439

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 75/389 (19%), Positives = 142/389 (36%), Gaps = 33/389 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGL------HCSIWDRSFEPVVRKQAHKIRAARL-------- 140
           D+  F P    L RR++   L      H + W+ +      K    + +A          
Sbjct: 54  DESIFTPEHVEL-RRALRKLLEKEIIPHVNGWEEAGGFPAHKVFKTLGSAGFLGVNKPVK 112

Query: 141 YLMAQLEAGHLMSPSVTSASMV--ALMTTPRVHKDWAPKIF----SREYDPTNKAPMQKT 194
           Y    L+    M+      ++   AL     V  D          S E      AP    
Sbjct: 113 YGGLGLDFSFTMAVHEEMGNIPCGALPMAIGVQADMCTPALTNFGSDELKKLFLAPNIAG 172

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253
            +   LG++E   G+D++AI +   K  D      G  W  +   +D   +LA   EG+ 
Sbjct: 173 DIVGCLGVSEVGAGSDVSAIKTTAVKRGDDYVINGGKMWTTNGAQADWMCLLANTSEGKN 232

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM 312
                  +       G+  Q    K+G  S+ TV++ F +        +     G V  M
Sbjct: 233 PHLNKSLICVPMKTKGIVVQPRMKKLGMHSSDTVQIFFEDVVVPQKYRIGEEGLGFVYQM 292

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K      L  ++ +++     + +  +Y  +R   G  L+   V+   +A++  ++    
Sbjct: 293 KQFQDERLVGSVSALTICDRCIRQTANYCHQRKAFGKTLLSNQVIHFKLAELQTEVEMLR 352

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  +R  + + + K           +A + K    ++   V    ++  GG GY+ E  I
Sbjct: 353 STIYRATDLYVKGKD-------VTYLASMCKLKAGRLLREVTDACLQYWGGMGYM-EGEI 404

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLE 459
           +R +R+S   SI  G+   M+  +   ++
Sbjct: 405 SRAFRDSRLVSIGGGADEVMLSIICKYMD 433


>gi|313220589|emb|CBY31437.1| unnamed protein product [Oikopleura dioica]
          Length = 614

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 151/407 (37%), Gaps = 37/407 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            +++     GL           +        R + +     L    ++ +        + 
Sbjct: 89  EMVQMLRDFGLFGMQVPEEHGGLGMSNVQMARMSEIGGELDLGVSIYIGAHQSIGFKAIL 148

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           ++ TP + + + P + S E                   LTE   G+D +++ ++  K  D
Sbjct: 149 ILGTPEMKEKYLPAVASGE-------------KIAAFCLTEPSTGSDASSVQTRAVKQED 195

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G + ++G K +++   ++D F + AQV    E       +   + +    G+ +   + K
Sbjct: 196 GSFLMNGGKIWITGGGIADIFTVFAQVPVEQEDGSTKDKMTAFIVERDFGGVTHGAPEKK 255

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----L 332
           +G + + T E+ F +         N+     E  K+ +  L+S    +           +
Sbjct: 256 MGIKCSNTAEVYFDDVRIPA---ENIIGEVGEGFKVAMEVLNSGRYGMGATLNGTQKGLI 312

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A  +A  R      +     ++  +A +  +  A+ A+S+ +AN+ D           
Sbjct: 313 KKATEFAANRTQFRNKIYKFGAIQEKLARMHAEQYASEAVSYLVANAMDHKTEN------ 366

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             + A   K +  + A     E ++ +GG GY+ E+ + +  R+     I  G+ + + L
Sbjct: 367 YHLEAACGKIFASERAWHCCDETIQVMGGMGYMFEKGVEKVMRDLRIFRIFEGTNDILRL 426

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
            V     +G     Q  + + +   S      T+++  +    ++KG
Sbjct: 427 MVG---LQGLQYTGQQLAPIAKAAKSPIANAPTLIKFKMDQRAKEKG 470


>gi|311895307|dbj|BAJ27715.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 380

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 139/390 (35%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A +A   TP    +   G     +    AW A    +   GL     D            
Sbjct: 19  AFLAREVTPHHARWERQG-----IVDRSAWLA----AGKAGLLGLAVDERHGGGGSPDFR 69

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                A  ++ A      +   +      +  + T    + W P   S E          
Sbjct: 70  FAAVLAEEFVRAGASGLAVGLHNDIVGPYLTGLATEEQRERWLPGFCSGE---------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
              +   + +TE   G+D+ AI +      D  Y L+G K F+S+ + +D  +++A+   
Sbjct: 120 ---LITAIAMTEPDTGSDLQAIRTTAVDAGDH-YLLNGAKTFISNGILADLVVVVARTTA 175

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G   +  L  +    G    R  +KIG  +  T EL F +       LLG+ N     
Sbjct: 176 EGGAHGLSLLAVERGAPGFERGRNFDKIGQHAQDTAELFFHDVRVPKTDLLGEENQGFLY 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+ +++     L E I Y +RR   G  L     ++  IA++A + A 
Sbjct: 236 LMRNLAQERLAIAVAAIAAAEAVLDETIGYVKRRTAFGRPLARLQHVRFEIAELATECAV 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   R     +         A   + A + K+W  ++        ++  GGSGY+ + 
Sbjct: 296 TRAFVDRCVREHNR-------YALTPVDASMAKWWATELQKRAADRCLQLHGGSGYLRDS 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++AR + +    +I  G+   M   V   L
Sbjct: 349 AVARAFTDGRVQTIYGGTTEIMKEIVGRSL 378


>gi|170725395|ref|YP_001759421.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169810742|gb|ACA85326.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC
           51908]
          Length = 391

 Score =  227 bits (579), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 127/368 (34%), Gaps = 35/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +    V   ++ + A  +  +       +   S      +
Sbjct: 52  REIMNELGEMGLLGATLPEKYGCSNVNYVSYGLVAREIERVDSGYRSAMSVQSSLVMYPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + PK+ + E+                 GLTE   G+D   + ++ ++I 
Sbjct: 112 YAYGSEEQRVKYLPKLATGEW-------------VGCFGLTEPDVGSDPGGMKTRAERID 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D FI+ A++EG++  F++     +    GL   +++ K   R
Sbjct: 159 GGYRLNGAKMWITNSPIADVFIVWAKLEGKIRGFIL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----- 337
           ++ T E+   N        +  + G          L+ A   ++   +  AE        
Sbjct: 214 ASVTGEIVMDNVEVPESALMPNAEGLQGPFG---CLNKARYGIAWGALGAAEFCWHGARQ 270

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R      L    ++++ +AD+  +I        +     D+        A      
Sbjct: 271 YTLDRVQFNRPLAANQLIQKKLADMQTEITTGLFACLQAGRLMDQE-------ALPVEAI 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   + +  GG+G  +E  I RH     A +   G+ +   L +L  
Sbjct: 324 SLIKRNSCGKALDIARMSRDMHGGNGISDEFHIIRHVMNLEAVNTYEGTHDIHAL-ILGR 382

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 383 AQTGIQAF 390


>gi|239941416|ref|ZP_04693353.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239987880|ref|ZP_04708544.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291444861|ref|ZP_06584251.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291347808|gb|EFE74712.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 385

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 144/395 (36%), Gaps = 40/395 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A +A    P    +   G+         A      +    G+     D  +       +H
Sbjct: 19  AFIAAEVVPVYDEWFAAGQ---------APRDFYLKLGELGVFGIEVDEEYGG-AGIDSH 68

Query: 134 KIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           K  A      A+       S   ++     + ++ T    K W PK  + E         
Sbjct: 69  KYEAVIYEETARAGVSFGGSGVHTLLGLPYIKMLATDEQKKRWLPKFATGEEM------- 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV 249
                   L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+ 
Sbjct: 122 ------WALAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCART 175

Query: 250 EG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
                    F +     D    G    R  +K+G + + T EL F +       L+G+ N
Sbjct: 176 AAPREDDRRFGISLFAVDTKSEGYSVGRKLDKLGLKVSDTAELAFVDVKVPVEDLMGEEN 235

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G +           A  + +    ++  A  Y + R V G  +      K  +A   
Sbjct: 236 KGFGYLGTNLASERWGIAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQ 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA A++ R   + D  +  + EAA A       K +C ++A  VI   ++  GG G
Sbjct: 296 AEVDAAQAVADRALEALDAGELTAAEAASA-------KLFCTEVAHRVIDRCLQLHGGYG 348

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ E  IAR Y ++  N I  G+   M   +   +
Sbjct: 349 FMNEYPIARLYADNRVNRIYGGTSEVMKSIIAKSM 383


>gi|145225190|ref|YP_001135868.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217676|gb|ABP47080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 392

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 131/358 (36%), Gaps = 22/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L RR+   GL    +                   L L+ +       S  + ++ +  
Sbjct: 52  RELHRRAAAAGLLGIGFAEEIGGSGGDLR------DLVLLTEAVMEAGGSSGLLASLLTH 105

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P +     P     E   +  AP         LG+TE   G+D+A I +  ++  D
Sbjct: 106 HIAVPHMAAQGDP-----EQIRSFVAPTLAGEKIGSLGITEPDTGSDVAGIRTTARRDGD 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             Y ++G K F++S +   F+  A   G  G   +  L+ +    G    R   K+G   
Sbjct: 161 H-YVVNGAKLFITSGVRADFVTTAVRTGGPGPSGISLLVVERGATGFLVSRALKKMGWLC 219

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL F++    ++  +    +G ++ M+         A+   +  +  L   + + +
Sbjct: 220 SDTAELGFTDVRVPVVNLVGPEGSGFLQIMQQFQVERAFIAVQCYATAQRCLDLTLDWVK 279

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L  + V++  I DIA  +  A   +    +      +          M  + 
Sbjct: 280 KRETFGRPLSTRQVVRHKIVDIATAVDVARTYTRAAVDRIVAGDTDVR-------MVSMA 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K    +     +  A++  GG GY+ E  + RHYR+S    I  G+   M   +   +
Sbjct: 333 KNQAVEACALAVDTAVQLYGGMGYLRETEVERHYRDSRILGIGGGTTEIMKEIIAKQI 390


>gi|315499057|ref|YP_004087861.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417069|gb|ADU13710.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 389

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 40/375 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSV 156
           +  PA    +      GL  +     +        A+ + A  +  +       +   S 
Sbjct: 47  QTDPAIFREMG---ERGLLGATLPEPYGGAGASYVAYGLIAREVERVDSGYRSMMSVQSS 103

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +    + + PK+ S E+                 GLTE   G+D A++ +
Sbjct: 104 LVMYPIYAYGSEAQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPASMRT 150

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             ++ +DG        W  +SP++D F++ A+++G     ++   + D   +GL   ++ 
Sbjct: 151 TARRAADGYVLNGTKMWISNSPIADVFVVWAKLDG-----IIRGFVLDKGMSGLSAPKIH 205

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA 335
            K+  R++ T E+   N         +     VE +K     L+ A   +S   +  AE 
Sbjct: 206 GKLSLRASITGEIVMDNVLV----GEDALLPNVEGLKGPFGCLNRARYGISWGVMGAAED 261

Query: 336 IHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
             +  R     R   G  L    + ++ +AD+  +I      S R+   FD  + + E  
Sbjct: 262 CWHRARQYGLDRQQFGRPLAQTQLFQKKLADMQTEITLGLQASLRVGQLFDAGQVQPE-- 319

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                M  + K   C  A  +   A +  GG+G  EE  + RH +     +   G+ +  
Sbjct: 320 -----MISLIKRNNCGKALDIARMARDMHGGNGIHEEYHVMRHAQNLETVNTYEGTHDVH 374

Query: 451 VLDVLNLLEKGTNLF 465
            L +L   + G   F
Sbjct: 375 AL-ILGRAQTGLQAF 388


>gi|182434841|ref|YP_001822560.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775359|ref|ZP_08234624.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|178463357|dbj|BAG17877.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655692|gb|EGE40538.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 404

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 140/386 (36%), Gaps = 40/386 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHL 151
            WD  E  P    +++ +   GL+   ++   +         ++ A   L       G  
Sbjct: 33  EWDAREETP--WPVIQEAARIGLYG--FESLADLYGDPTGLSLQIANEELFWGDAGIGMA 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +  + + +    TP    +W P+ +  E DP                ++E   G+D+
Sbjct: 89  LFGTSLAVAGIFASGTPDQLAEWVPQCYGDEDDP----------KVAAFCVSEPGAGSDV 138

Query: 212 AAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +A+T++ + I   D         W  +  +++  +++A V+  +G       +      G
Sbjct: 139 SAMTTKARYIEASDSWVISGQKAWITNGGIAEVHVVVASVDPALGARGQAAFIVPPGTKG 198

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN------------VSTGPVEDMKILIY 317
           L   R   K+G R++ T +L            L                   +    +  
Sbjct: 199 LTAGRTVKKLGLRASHTADLFLDEVTVPGHCLLGGKEKLDARLARAREGSTAKGQAAMAT 258

Query: 318 LDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
            +      A  ++   R +   A+ YA  R   G  +I+   +  A+ADI  +I A   L
Sbjct: 259 FEVSRPTVAAQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLL 318

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++ A      ++             ++K    ++A A   +A++ +GG+GY  E  + R
Sbjct: 319 IWQAAWMARNDRTFDA------GQGSMSKLRAGELAVAATEKAVQILGGAGYSREHPVER 372

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            YR++   +I  G+     L +   +
Sbjct: 373 MYRDAKIYTIFEGTSEIQRLVIARAI 398


>gi|55981907|ref|YP_145204.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|82407403|pdb|1WS9|A Chain A, Crystal Structure Of Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|82407404|pdb|1WS9|B Chain B, Crystal Structure Of Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|85544473|pdb|2CX9|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544474|pdb|2CX9|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544475|pdb|2CX9|C Chain C, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|85544476|pdb|2CX9|D Chain D, Crystal Structure Of Acyl-Coa Dehydrogenase
 gi|93279190|pdb|2D29|A Chain A, Structural Study On Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|93279191|pdb|2D29|B Chain B, Structural Study On Project Id Tt0172 From Thermus
           Thermophilus Hb8
 gi|55773320|dbj|BAD71761.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 387

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 147/385 (38%), Gaps = 38/385 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQ 145
           PG    D+    P    L+R+    G+  ++   ++       R  A  + A   Y  A 
Sbjct: 28  PGAAERDRTGAFP--WDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGA- 84

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A  + S +  +   + L  +    + + PK+ S E                  GLTE 
Sbjct: 85  -LALTVASHNSLATGHILLAGSEAQKEAFLPKLASGE-------------ALGAWGLTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----CFLVPRL 261
             G+D AA+ ++ +K+  G       ++     ++  ++++A+ +           +   
Sbjct: 131 GSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
                  GL   R + K+G  ++ T +L   + F      L        D  +L  LD  
Sbjct: 191 AFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYD--VLRVLDGG 248

Query: 322 IMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++ M V L +A         + R   G  + +   +   +A+ A ++ AA  L  + 
Sbjct: 249 RIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKA 308

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +  + EAA A       K +  + A     EA++ +GG GY+++  + R++R+
Sbjct: 309 AELKDAGRPFTLEAAQA-------KLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRD 361

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
           +    I  G+   + L +   L + 
Sbjct: 362 ARLTRIGEGTSEILKLVIARRLLEA 386


>gi|323166668|gb|EFZ52426.1| aidB domain protein [Shigella sonnei 53G]
          Length = 256

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 8/254 (3%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73
           +H    +    NQP      N Y SD  L   +    +    + L  +G+ + +  + EL
Sbjct: 1   MHWQ--THTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            R+AN N P+L  Y   G R D V FHPAWH L++    + +H   W+       R  A 
Sbjct: 59  GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSGAF 114

Query: 134 KIRAARLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             RAAR  L AQ+EAG L   ++  +A+ + L   P   +DW   + S  YD       Q
Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           K  + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ  G 
Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234

Query: 253 VGCFLVPRLLEDGS 266
           + CFL       G+
Sbjct: 235 LSCFLCRAFCLTGN 248


>gi|296387009|ref|ZP_06876508.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           aeruginosa PAb1]
          Length = 413

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/329 (19%), Positives = 128/329 (38%), Gaps = 36/329 (10%)

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED 264
           ++ +  +DG Y +SG K F++    D       ++LA++         +  FLVP++L +
Sbjct: 1   TRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVN 60

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                G  N L    +++K+G +++AT  + F    G+L+G++N     +  M     L 
Sbjct: 61  ADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDCATGWLVGEVNKGLAAMFTMMNYERLG 120

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIA 367
             I  ++    S   AI YAR R  S               +I  P ++R +  +     
Sbjct: 121 VGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNE 180

Query: 368 AATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              A S  +A   D AK      +R        ++ P+ K +   M         +  GG
Sbjct: 181 GGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGG 240

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479
            G+I E    +  R+     I  G+     LD++   ++  G          ++  + S+
Sbjct: 241 HGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKVIGSGGAFSRHFTDEIKAFVASA 300

Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKI 508
            + +    +   +  +  + L  +L ++ 
Sbjct: 301 DEALGEFSKPLAAAVENLEELTAWLLDRA 329


>gi|302867189|ref|YP_003835826.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570048|gb|ADL46250.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 606

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 101/543 (18%), Positives = 192/543 (35%), Gaps = 78/543 (14%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
            +     + ++ + +      A+  A   R A+   P        G+R   V   P   A
Sbjct: 31  RYAEHTRETVDEVLDLAARVAAERFAPHNRAADTGEPTF-----DGQR---VRTIPQVKA 82

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            L      GL  +  D S   +         A   +  A +        ++ +A+++   
Sbjct: 83  ALEAFAETGLLAATMDESVGGLQLPHTVAAAAFAWFQAANVGTSAYPMLTLGNANLLLAH 142

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +      W               PM +      + L+E + G+ +A +T++ +   DG 
Sbjct: 143 GSAEQIDTWV-------------RPMVEGRFFGTMCLSEPQAGSSLADLTTRAEPQDDGT 189

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNG 269
           Y + G K ++S    +       ++LA++ G       +  F+VP++L D     G  N 
Sbjct: 190 YRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGVKGLSLFIVPKVLLDDDGNLGPRND 249

Query: 270 LCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    L +K+G R      L F              G+L+G  +     +  M     + 
Sbjct: 250 VVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAVGYLVGQPHQGLAVMFHMMNEARIG 309

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILID------------QPVMKRAIADIALDIA 367
               + +    +  +++ YAR+R   G  + D               ++R +      + 
Sbjct: 310 IGAGATALGYTAYLKSVAYARQRPQ-GRPVADKDPTTPQVPIVAHSDVRRMLLAQKSYVE 368

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A AL        DE K+   EA          ++ PITK W  +   A    A++  GG
Sbjct: 369 GALALVLYCGRLLDEQKTAPAEADRERAQLLLDLLTPITKSWPAQWCLAANDLAIQVHGG 428

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSS 479
            GY  +  + +H+R++  N+I  G+     LD+L      +     E L  T+   +  +
Sbjct: 429 YGYTRDYDVEQHWRDNRLNAIHEGTHGIQALDLLGRKVTMRDGAALELLLETIRGTVTRA 488

Query: 480 GKK---VITILRDSISLCKEDKGLARFL----TEKIALASSAAALYRAGMNDIADVFLEN 532
            K       +     +       + R L      ++ALA+++  L   G   IA ++LE 
Sbjct: 489 WKAEGFASELAGQLGAAVDRIAVVTRRLWAPGDPELALANASVYLEAVGHVVIAWMWLEQ 548

Query: 533 RFL 535
              
Sbjct: 549 VLA 551


>gi|260905671|ref|ZP_05913993.1| butyryl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 379

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 126/357 (35%), Gaps = 26/357 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L+     G+        F           +       A      +++    +   + L  
Sbjct: 42  LQTLAEVGVLGLNLPEEFGGPGVGSVAMSQMVAAVTEACASTASIITAQFLATDSILLGG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P+  S E             V    GLTE   G++ A ++++  K+  G +
Sbjct: 102 TDAQRESWLPRAASGE-------------VIGSFGLTEPGAGSNPAEMSTKAVKVDGGWH 148

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSN 284
                 +  ++  +D  ++ A+ +   G   +   + D   +  GL +   +  +G R +
Sbjct: 149 LKGTKCFITNAGFADFIVVYAKTDVEAGHKGISAFIVDTKAASAGLNFNPPEKTMGLRGS 208

Query: 285 ATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
              E    +        L V   G    M++L    ++ A MS+   + +L  A+ +A  
Sbjct: 209 PVYEFVI-DAIVPDDALLGVEGEGFTTAMRVLDRGRIEVAAMSLGIGKAALDAAVDWAGE 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R +SG  L     +   +AD+     +A  L+   A   D     +  +A A++ A    
Sbjct: 268 RRISGKPLNRLQGIAFKLADMYTKYRSAWLLTMDAAEQRDAEVDFTRSSATAKLAASEAA 327

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                    +  EA++  GG G+  +  + R+ R++    I  GS       +   L
Sbjct: 328 -------AFIADEALQIHGGYGFTRDFPLERYVRDARIYRIYEGSSEIQRTIIARSL 377


>gi|121609885|ref|YP_997692.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554525|gb|ABM58674.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 379

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 132/381 (34%), Gaps = 34/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+   +   G R D+            ++  +GL C      +        H        
Sbjct: 29  PRQAEWDQAG-RIDR--------QTWLKAGREGLLCVAVPAEYGGGGGDFGHAAIVLEEA 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +        S   A  +  + T    + W P I   E               + + 
Sbjct: 80  HRAGVSGAGFSLHSDIIAPYIVRLGTEAQKQKWLPGICRGEQ-------------ILAVA 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260
           +TE  GG+D+ A+ +   +  D  Y + G K F+S+ +  D  +++ +     G   V  
Sbjct: 127 ITEPGGGSDVKAMRTTAVRDGDE-YVIDGSKIFISNGLNCDMVLLVCKTSPAAGAKGVSL 185

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           ++ +    G    R  +K+G  +  T EL F N       LLG  N     +        
Sbjct: 186 IMVEADRAGFRRGRKLDKVGQPAADTAELFFDNLRVPVANLLGQENQGFAYLMQELAQER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A+ +   +   L   + Y ++R      + D    K  +AD+     A   +     
Sbjct: 246 LIIALYAAVALERLLGLTLEYVKQRRAFEQTVWDFQNTKFKLADVKAQSVAVRTMVDYYL 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                 K   +EAA A++ A    + C       + + ++  GG GY+ E  IAR + + 
Sbjct: 306 GEHLRRKLSVQEAAIAKMYATEALWKC-------LDDMVQLHGGYGYMLEYPIARAFADY 358

Query: 438 PANSILLGSGNAMVLDVLNLL 458
             + ++ G+   M   +   L
Sbjct: 359 RVSRVVGGANEVMRDLIARKL 379


>gi|56477122|ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56313165|emb|CAI07810.1| Glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 395

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 144/414 (34%), Gaps = 45/414 (10%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P  + ++L    E ++  TA+  ++      P++       E+ D+  F+          
Sbjct: 13  PLHLDEQLTET-ERLVRDTARAYSQ--ERLLPRVQEAFRH-EKTDRAIFNEMG------- 61

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPR 169
              GL  +     +             AR           +MS  S      +    T  
Sbjct: 62  -ELGLLGATIPEEYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEA 120

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K + PK+ + E+                 GLTE   G+D  ++ ++ +K+  G     
Sbjct: 121 QKKKYLPKLATGEW-------------VGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSG 167

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +SP++D F++ A+ +       +   + +    GL    +  K+G R++ T E+
Sbjct: 168 SKMWITNSPIADVFVVWAKDDEGQ----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEI 223

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHV 344
                F           G          L+SA   ++   +  AEA +     Y   R  
Sbjct: 224 VMDEVFVPEENAFPTVRGLK---GPFTCLNSARFGIAWGALGAAEACYETARQYTLDRKQ 280

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    ++++ +AD+  +I        RL    DE  +       A  +  I K   
Sbjct: 281 FGRPLAANQLIQKKLADMLTEITLGLQGCLRLGRMKDEGTA-------AVEITSIMKRNS 333

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           C  +  +   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 334 CGKSLDIARVARDMLGGNGISDEFCVARHLVNLEVVNTYEGTHDVHALILGRAI 387


>gi|256372243|ref|YP_003110067.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008827|gb|ACU54394.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 401

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 128/375 (34%), Gaps = 26/375 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D    +P    L       GL        +            A          A
Sbjct: 26  PRARAIDAEGTYPD--DLFEVFRSAGLFGLCIPEEYGGSGAGILGLTIAIEEVAKFSQTA 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G ++  S      V +  +    + + P I                      GL+E   G
Sbjct: 84  GLMLLLSRLPTGPVMIAGSEEQKRRYLPGIADGTQR-------------ASFGLSEAEAG 130

Query: 209 TDIAAITSQGQKISD--GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLE 263
           +D+  + ++     D  G + LSG K ++S    +D + + A+           +   + 
Sbjct: 131 SDVVGMRTRAVPDPDRPGGWILSGRKSWISGVRQADWYTVFAKTGDPTSRRHDAITAFIV 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK--ILIYLDSA 321
           + S  G+   R+ +K+G     T EL            +    G    M     +    A
Sbjct: 191 ERSWPGVDVPRVDHKMGVHGVDTGELLLDEVRVPPENVIGEVGGFRLAMLGLNAMRPVVA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +     +L  A  Y R R   GG + D   ++  +A +A +I AA  L++R A   D
Sbjct: 251 ARGIGLAEGALMYATTYVRNRPAFGGRIADFQGIQWELAKLATEIEAARLLTYRAAWLAD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +   E          + KY+  ++A    + A++ +G +GY+ +     +YR++   +
Sbjct: 311 QGRFTREW----VPFLSMAKYYATELAVRASSVALQLLGAAGYMSDHPTELYYRDAKQLT 366

Query: 442 ILLGSGNAMVLDVLN 456
           I+ G+    +  +  
Sbjct: 367 IVEGTSQVQLNLIAR 381


>gi|118590969|ref|ZP_01548369.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118436491|gb|EAV43132.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 386

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 101/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +  Q  +   G + +SG K F+S  
Sbjct: 101 CKGDQIERYLLPAVRGEKMDALAMTEPDAGSDVRGMKCQAVRDG-GDWVISGSKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D FI+          +     +   L D    G   +     + +R      L F  
Sbjct: 160 EHADFFIVFVATGVDETPKGPKKRITCFLVDRGTPGFEVREGYRSVSHRGYKNCILYFDG 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      L  A MSV   R     A++YA  R   G  + 
Sbjct: 220 CRLPDSQVLGEVDGGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQAIA 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 RFQGVSFQVADMITEIDAADWLTLAGAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 333 VTDTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRELFR 382


>gi|118404420|ref|NP_001072710.1| acyl-CoA dehydrogenase (3J649) [Xenopus (Silurana) tropicalis]
 gi|115312996|gb|AAI24059.1| acyl-CoA dehydrogenase (3J649) [Xenopus (Silurana) tropicalis]
          Length = 422

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 140/376 (37%), Gaps = 24/376 (6%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  ++W+     PA H + +   + G+        +  +    ++ I  A        
Sbjct: 60  INPYVDQWEDAGQFPA-HKVFKILGNAGILGVNKPTEYGGLGLDFSYSIAIAE------- 111

Query: 147 EAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           E G++    V  A  V + M TP +      +  S E       P     V   LG++E 
Sbjct: 112 ELGNIRCSGVPMAIGVQSDMATPAL-----TRFGSDELKRQFLVPTIAGDVVTCLGVSEA 166

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A+I +   K  D         W  +   +D   +LA             +    
Sbjct: 167 GAGSDVASIKTTAVKKGDDYIINGSKMWTTNGCQADWMCLLANTSAGPPHKNKSLICLPM 226

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
              G+   +   KIG +S+ T ++ F +      +L+G+  +             +    
Sbjct: 227 KTPGVQVTKKIEKIGMKSSDTAQIFFEDVRVPSKYLIGEEGMGFTYQMLQFQEERMWGVA 286

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             ++ M   L E I Y  +R V    ++   V+   +A++A ++    +L +R    + E
Sbjct: 287 NVLTPMGNILQETIDYTSQRKVFNQPVLHNQVVHFRLAELATEVELLRSLLYRSVAMYVE 346

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               ++       +A + K    ++A  +    ++  GG G+ +E  ++R YR+S   SI
Sbjct: 347 GNDVTK-------LASMAKLKAGRLARELSDSCLQFWGGMGFTDEVLVSRFYRDSRLLSI 399

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M+  +   +
Sbjct: 400 GAGADEVMLSIICKFM 415


>gi|194291552|ref|YP_002007459.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225456|emb|CAQ71402.1| ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN; putative Butyryl-CoA
           dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 379

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 126/352 (35%), Gaps = 26/352 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        +          I +      A      ++     +   + +      
Sbjct: 48  AELGLMGMNLPERWGGTETSPVALILSLAEVAKACASTSSMLGAHYLATDSILIGGDDSQ 107

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P                  +      LTE R G++ A + ++     DG Y L G
Sbjct: 108 RARYLPD-------------AAAGTRLGAFALTEPRAGSNPADMATRATPEGDG-YRLRG 153

Query: 231 HKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+S+  +  FI++ A+ +   G   +   + +   +G+     +  +G       E+
Sbjct: 154 VKHFISNAEAADFIVVYAKTDPAAGTRGISAFVVERHSDGVQVAPAEKLMGIHGAPAHEV 213

Query: 290 EFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
              + F      L    TG    MK+L    LD A  S+     +LA A+ +AR+R V G
Sbjct: 214 AL-DCFVPAANRLGPEGTGFRTAMKVLDNSRLDVAATSLGIAEAALACAVDWARQRQVGG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L  +  ++   AD+   + AA  L+ + A    + +  +E+A+ A       K +  +
Sbjct: 273 EPLARKQGLQWMFADMRTRLEAAWLLTLQAAARRRDGEPFTEQASMA-------KLYASE 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           M   V   A++  GG G+  E  + R  R++    I  GS       +   +
Sbjct: 326 MVGFVTDAALQIHGGYGFTREMPLERLVRDARILRIYEGSSEIQRTVIARAV 377


>gi|197116941|ref|YP_002137368.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197086301|gb|ACH37572.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 381

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VA 163
             +    G+        +  +       I        A L++G L S +    +    + 
Sbjct: 42  WEKCAEFGIPGITMPEKYGGLGLDTMTSIATMEGLGYACLDSGLLFSLNSHVWTCESPIN 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + +              S+  G  +TE   G+D  ++  + +K  D
Sbjct: 102 RFGSEEQKKRYLPGLIAG-------------SLRGGHAMTEPDAGSDAFSMRCRAEKRGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++P++D  ++ A      G   V   + +    G    +    +G R+
Sbjct: 149 RYILNGSKTFITNAPIADLLLVFAVTCKEKGFAGVSAFIVERGFPGFSTGQPLETMGLRT 208

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHYAR 340
               E+            L             +  + +      +  M   L + + YA+
Sbjct: 209 CPLGEVFLEECEVPEENRLGQEGSGAAIFNSEMEWERSCLFAAHLGAMDKILEDCVAYAK 268

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   I+D+ + I  +  +  ++A    + K    E+A A++    +
Sbjct: 269 ERQQFGKAIGKCQSISHKISDMKVRIELSRLMLHQVATLKGQGKRAPLESAMAKLFISES 328

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               C        +A++  G  GY  E    R+ R++ A  I  G+       +   L
Sbjct: 329 YVQNC-------TDALQIHGAYGYSAEYDFERNLRDAIAGKIYSGTSEIQRNIIATFL 379


>gi|56696828|ref|YP_167190.1| glutaryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678565|gb|AAV95231.1| glutaryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 436

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/444 (17%), Positives = 147/444 (33%), Gaps = 58/444 (13%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           P   G +    D             + ++     E +++  A+  A+      P++    
Sbjct: 43  PDLGGFDW--EDPF------RLADQLSED-----ERMIADAARAYAQ--EKLQPRVT--- 84

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              + +      P     +      GL  +     +  +          AR         
Sbjct: 85  ---QAFQTEHTDPDIFREMG---EMGLLGTTIPEQYGGIGAGYVTYGLVAREVERVDSGY 138

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +MS  S      +    +      + PK+ S E+                 GLTE   
Sbjct: 139 RSMMSVQSSLVMYPIYAYGSEEQRMKYLPKLASGEW-------------IGCFGLTEPDA 185

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D A++ ++  K   G        W  ++P++D F++ A+ +   G   +   + +   
Sbjct: 186 GSDPASMKTRAVKTEGGYRLTGTKMWISNAPIADVFVVWAKSDAHDGK--IRGFVLEKGM 243

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   +++NK+  R++ T E+                   V  +K     L+ A   +S
Sbjct: 244 KGLSAPKIENKMSLRASITGEIVMDGVEV----GEEALLPHVSGLKGPFGCLNRARYGIS 299

Query: 327 GMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  AEA  +  R     R      L    + +  +A++  +IA     S R+    D
Sbjct: 300 WGVMGAAEACWHGARQYGLDRKQFNRPLAQTQLFQLKLANMQTEIALGLQASLRVGRLMD 359

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           EAK+       A  M  I K   C  A  +   A +  GG+G   E  + RH       +
Sbjct: 360 EAKA-------APEMISIIKRNNCGKALEIARHARDMHGGNGISLEFQVIRHMVNLETVN 412

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLF 465
              G+ +   L +L   + G   F
Sbjct: 413 TYEGTHDVHAL-ILGRAQTGLQAF 435


>gi|239813343|ref|YP_002942253.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239799920|gb|ACS16987.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 386

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 136/368 (36%), Gaps = 22/368 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W++ E  PA H + R+    G+       +F       ++         MA+ 
Sbjct: 22  INPHVDEWEEAEIFPA-HEVFRKLGKLGMLGLNKPEAFGGAGLDYSYA------MAMAEA 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +  +   M TP + +       S E      AP         +G++E  
Sbjct: 75  LGHVSCGGVPMAIGVQTDMCTPALARFG-----SDELRREFLAPAIAGETVGCIGVSEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A + S  +K            W  +S  +D   ML              ++    
Sbjct: 130 AGSDVAGLKSHARKDGADYLISGQKMWITNSLQADWMCMLVNTSDGPVHRNKSLVMVPMD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+   +   KIG  S+ T  + F N        +     G V  M+      L +A  
Sbjct: 190 SPGIEKAKKIRKIGMHSSDTGLIHFDNVRVPQRYRIGEEGQGFVYQMQQFQEERLWAAAS 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+  M   +A+ I +A++R + G  L DQ  ++  +A++  ++ A  AL++R  +   + 
Sbjct: 250 SLEPMEDCIAQTIEWAQQRQMFGATLADQQWVQFKLAELKTEVEALRALAYRACDLHVQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   E       +A + K    ++   V    ++  GG G+  E  ++R YR+    SI 
Sbjct: 310 QDVLE-------LASMAKLKTGRLTRQVADTCLQFWGGMGFTLENRVSRLYRDGRLGSIG 362

Query: 444 LGSGNAMV 451
            G+   M+
Sbjct: 363 GGADEVML 370


>gi|94310662|ref|YP_583872.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354514|gb|ABF08603.1| Acyl-CoA dehydrogenase, long-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 388

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 141/382 (36%), Gaps = 33/382 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMA 144
             P  + W+  E  PA HAL R+    G         +  +    ++ + AA    +  A
Sbjct: 22  IDPFVDEWEAAETFPA-HALFRKMGELGFLGITKPVEYGGLGLDFSYAVAAAEALGHARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q     +   +  +   +A   T  + +++              AP     + + +G++E
Sbjct: 81  QGVGMGIGVQTDMATPALAAFGTDALKREFL-------------APAIAGEMVVSIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVP 259
              G+D+A++ ++ ++  D         W  +   +D   +L               +VP
Sbjct: 128 VGAGSDVASLKTRARRDGDDYVISGSKMWITNGTQADWICLLCNTSDGPVHKNKSLIIVP 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+  Q++  K+G   + T ++ F +        +     G +  MK     
Sbjct: 188 LRENGRLVRGVEVQKI-RKMGMWCSDTAQIFFDDVRVPARNRIGDEGMGFIYQMKQFQEE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L+ A   ++   + + E   Y R+R   G  L+D   ++  +A++  ++ +  AL    
Sbjct: 247 RLNGAARRLACSAL-IEETADYLRQRVAFGKPLLDNQYIQFKLAELKTELESLRALVHVA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++ + +   E       +A + K    +++  +    ++  GG GY  +    R YR+
Sbjct: 306 TRAYIQGEDVVE-------LASMAKLKAGRLSREIADWCIQFQGGMGYTWDNHANRAYRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M+  +   +
Sbjct: 359 FRLGSIGGGADEVMLQVIAKQM 380


>gi|85094657|ref|XP_959931.1| hypothetical protein NCU02287 [Neurospora crassa OR74A]
 gi|28921388|gb|EAA30695.1| hypothetical protein NCU02287 [Neurospora crassa OR74A]
          Length = 546

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 160/459 (34%), Gaps = 45/459 (9%)

Query: 11  AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           A +  H+ S++L    Q   F   + Y       +  + + +  H  L            
Sbjct: 107 ASSSSHEQSEALEPFGQLIPFADPSWY------QSYHSPYYNETHAALR--------AEI 152

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVV 128
           +E    A           P    WD+ +  PA  +  + +R    GL  + +  ++    
Sbjct: 153 REWVETA---------IDPYVTEWDEKKEVPAEIYKEMGKRGYLAGLLGTKYQSNYVENP 203

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPT 186
            K     +    + M   +            +++       P + K     +  R     
Sbjct: 204 IKSVPAEKWDLFHEMLVTDELSRTGSGGFVWNVIGGFGIGCPPLVKFGKKPLVDR----- 258

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIM 245
               +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +  
Sbjct: 259 ILPGILNGDKRICLAITEPDAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGIWSDYFT 318

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A   G  G   V  LL +    G+  +R+ +  G  S+ T  + F +       L+G  
Sbjct: 319 TAVRTGGPGMNGVSLLLIERDFPGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKE 377

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +        +   I  +   RV   E++ YA +R   G  LI+ PV++  +A +
Sbjct: 378 NQGFRVIMTNFNHERIGIIIQCLRFSRVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHM 437

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIG 420
           A  I A+      L N   + +   E  A  R+   I   K            EA +  G
Sbjct: 438 ARQIEASYNW---LENLIYQCEKMGETEAMLRLGGAIASLKAQATVTFEFCAREASQIFG 494

Query: 421 GSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  Y        + R YR+  A +I  GS   M+   + 
Sbjct: 495 GLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSIR 533


>gi|222111580|ref|YP_002553844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221731024|gb|ACM33844.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 398

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 128/366 (34%), Gaps = 31/366 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ S E+                 GLTE   G+D  ++ ++  K+  G  
Sbjct: 116 SEAQKQKYLPKLASGEF-------------IGCFGLTEPDHGSDPGSMATRAYKVDGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ VE       +   + D    GL    +  K+G R++ 
Sbjct: 163 LKGNKMWITNSPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   + F           G          L+SA   ++   +  AE   +  R    
Sbjct: 223 TGEIVMDDVFVPEENAFPEVRGLK---GPFTCLNSARFGIAWGAMGAAEFCWHTARQYTL 279

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I      + R+    DE ++  E       +  + 
Sbjct: 280 DRKQFGRPLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLI 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 333 KRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 391

Query: 461 GTNLFE 466
           G   F 
Sbjct: 392 GIAAFA 397


>gi|126464656|ref|YP_001045769.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126106467|gb|ABN78997.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 377

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 140/355 (39%), Gaps = 21/355 (5%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +   + +  F  +   +      A  Y+   L    + +     ++++++   P  
Sbjct: 36  IEPAVLAQMGELGFFGMTVPEEMGGVGAD-YMSYALALIEIAAGDGAVSTVMSVHNAP-- 92

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S         P  + +      LTE   G+D +A+ S+ ++   G Y + G
Sbjct: 93  FNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAG-GDYVIDG 151

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F++S  ++   ++ A++EG  G   +   L      G    ++++K+G  ++ T  L
Sbjct: 152 EKVFITSGRLAGWAVLFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCAL 211

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRH 343
            F +        +       E  +I L  L++  + ++   V +A+A   A     R R 
Sbjct: 212 RFDSLRVPEALRIG---AEGEGYRIALSSLETGRIGIAAQSVGMAQAALEAAVAYARERT 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI+   +   +A+    + AA  +    A   D  +    EAA A       K +
Sbjct: 269 SFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDTGQPCLTEAAMA-------KLF 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A  ++++A++  GG GY  +  + R YR+     I  G+ +   + +L  +
Sbjct: 322 ASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGM 376


>gi|330835538|ref|YP_004410266.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567677|gb|AEB95782.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 402

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 62/367 (16%), Positives = 132/367 (35%), Gaps = 34/367 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +++   GL       ++            A              +  +    + V +
Sbjct: 49  ELYQKAKEMGLMGVGIPEAYGGQGGDMLMTTIANEELSRVSPAFMVRIGANHLFTTPVLI 108

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + +  K+   E             V      TE   G+D+A I +  +K  +G
Sbjct: 109 FGTEDQKRKYVTKVARGE-------------VFAAHANTEPGAGSDVAGIKTTAKKE-NG 154

Query: 225 IYCLSGHKWFLSSPMSDAFIML-AQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKI 279
            + ++G K+F++     AF+++ A+             +   + +    G+      N +
Sbjct: 155 KWIINGRKYFITGSDKAAFLVVSARTSPPPSREERWKGITFFIVERDWPGVKIGSKINVM 214

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAE---- 334
           G R     E+   N       + NV     E  K+     D   + V+   V +A+    
Sbjct: 215 GLRGEQPNEVILDNVEVP---EENVLGKVGEGFKVAVTTYDRGRVGVAAQAVGIAQGAFE 271

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A +Y+ +R      LI    +   +AD+   + +A  L++  A   ++  +       A
Sbjct: 272 RAFNYSFQRQAFERPLIAFEGVAFKLADMLAHLESARLLTYWAATLAEKNHN------LA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K    ++A  V + A++  GG+G   +  + R+ R++   +I  G+ +   + 
Sbjct: 326 VTAASLAKMISTEVAEQVSSLAIKIHGGAGVEVQTGVERYLRDAMITTIYEGANDIQRIM 385

Query: 454 VLNLLEK 460
           V+  L +
Sbjct: 386 VVRDLVR 392


>gi|302342012|ref|YP_003806541.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301638625|gb|ADK83947.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 378

 Score =  227 bits (578), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 134/358 (37%), Gaps = 23/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV- 162
           H L ++    GL    ++  +  +      +            E GH+    V++A  V 
Sbjct: 37  HELFKKMGDLGLLGIRYEEKYGGMGLDYWFETVFLE-------ELGHIAGMGVSTAICVQ 89

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             M TP +      +  S     T   P     +   + +TE   G+D+AAI ++ ++  
Sbjct: 90  THMATPAIA-----EFGSEYLKETYLRPAIAGEMVSAIAVTEPDAGSDVAAIKTRARRDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +   +D   +LA+     G       +   +  G    +  +K+G R
Sbjct: 145 DHYLINGSKLYITNGVQADFLTLLARTSDEPGHHSFGLFVVPTNLPGFSVGKKLDKVGLR 204

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYA 339
           S+ T  L F +        +     G +  MK   +     +  +V+     +   + + 
Sbjct: 205 SSDTALLHFDDVPVPAQNLIGQEGEGFIMQMKQFQHERFCTLPSAVTMCEDMIKMTMEHL 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R V G  L  + V++  + D   +I A   L++ +       +  + E +  ++MA  
Sbjct: 265 RQRVVFGKPLATRQVLRHRMVDWLTEIEALRHLTYHIVRMKQAGQDATREVSMGKLMAG- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                 ++   V    ++  GG G+I E  IAR +R+S   SI  G+   M   +  L
Sbjct: 324 ------RLVRNVADGCVQMHGGMGFINETLIARCFRDSRVLSIGAGADEVMSEVIARL 375


>gi|296170430|ref|ZP_06852018.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894901|gb|EFG74622.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 387

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 134/371 (36%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D+    P  + ++ +    GL    +      +     A  +    L  + Q  A  L +
Sbjct: 37  DEEHSFP--YEVVAKMGEMGLFGLPFPEEHGGMGGDYFALSLALEELGKVDQSVAITLEA 94

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  +    +      W P + +                  G GLTE   G+D  A
Sbjct: 95  GVSLGAMPIYRFGSEEQKAKWLPDLTAG-------------RALAGFGLTEPGAGSDAGA 141

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG---CFLVPRLLEDGSPNGL 270
             +   ++ +G + ++G K F+++  +D   ++              +  ++      G 
Sbjct: 142 TRTTA-RLDNGEWVINGSKQFITNSGTDITKLVTVTAVTGTVGDKKEISTIIVPNGTPGF 200

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
             + + +K+G  ++ T  L F++        L    TG    + IL    +  A ++   
Sbjct: 201 TVEPVYSKVGWNASDTHPLSFADARVPEEHLLGPRGTGYANFLSILDEGRIAIAALATGA 260

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            +  + E++ YA+ R   G  +     +   IA +      A    +  A      K   
Sbjct: 261 AQGCVDESVKYAKERQSFGQPIGSYQAISFKIARMEARAHVARTAYYDAAAKMLADKPFK 320

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A+++A        + A     +A +  GG G++ E  +ARHYR+S    I  G+ 
Sbjct: 321 KEAAIAKMIA-------SEAAMDNARDATQIHGGYGFMNEYPVARHYRDSKILEIGEGTT 373

Query: 448 NAMVLDVLNLL 458
              ++ +   L
Sbjct: 374 EVQLMLIARSL 384


>gi|326329794|ref|ZP_08196114.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952380|gb|EGD44400.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 385

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 140/383 (36%), Gaps = 41/383 (10%)

Query: 96  KVEFHPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           + E  P +       I            G+        +      ++ K  A     +A+
Sbjct: 22  EKEVTPVYDEWYAAGIVPHDFYLKLGELGVWGIQVPEEYGG-AGIESFKYSAVITEELAR 80

Query: 146 LEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  S +     +  L+   T    + W P   S E                 + +T
Sbjct: 81  AGVSFGGSSTHVGLCLPYLLKLGTKEQMERWMPGFVSGEEM-------------WAIAMT 127

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLV 258
           E   G+D+A +T+  +   DG  Y L+G K F++  + +D  I+ A+            +
Sbjct: 128 EPGTGSDLAGMTTNAKLTEDGKHYVLNGAKTFITGGVNADRVIVCARTAPATPEDRRGGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKIL 315
             L  D    G    R  +K+G + + T EL F++    +   LG++      +     +
Sbjct: 188 TLLAVDTKLPGYEVGRKLDKLGLKVSDTAELSFTDVQVPVEDVLGEVGKGFSYLGQNLPV 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A+ + +    ++  A  Y   R V G  +      K  +A    ++ AA A+  R
Sbjct: 248 ERLGIAVGAYAQAAAAVEFAKAYVHDRKVFGTAVASFQNTKFELAACKAEVDAAEAVVDR 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              + D     + EAA A       K +C ++A  VI   ++  GG GY+ E  IAR Y 
Sbjct: 308 AIEAEDAGTLTAAEAASA-------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYA 360

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++  N I  G+   M L +   +
Sbjct: 361 DNRVNRIYGGTSEVMKLIIAKDM 383


>gi|315506402|ref|YP_004085289.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413021|gb|ADU11138.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 606

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 101/542 (18%), Positives = 192/542 (35%), Gaps = 78/542 (14%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
            +     + ++ + +      A+  A   R A+   P        G+R   V   P   A
Sbjct: 31  RYAEHSRETVDEVLDLAARVAAERFAPHNRAADTGEPTF-----DGQR---VRTIPQVKA 82

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            L      GL  +  D S   +         A   +  A +        ++ +A+++   
Sbjct: 83  ALEAFAETGLLAATMDESVGGLQLPHTVAAAAFAWFQAANVGTSAYPMLTLGNANLLLAH 142

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +      W               PM +      + L+E + G+ +A +T++ +   DG 
Sbjct: 143 GSAEQIDTWV-------------RPMIEGRFFGTMCLSEPQAGSSLADLTTRAEPQDDGT 189

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNG 269
           Y + G K ++S    +       ++LA++ G       +  F+VP++L D     G  N 
Sbjct: 190 YRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGVKGLSLFIVPKVLLDDDGNLGPRND 249

Query: 270 LCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLD 319
           +    L +K+G R      L F              G+L+G  +     +  M     + 
Sbjct: 250 VVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAVGYLVGQPHQGLAVMFHMMNEARIG 309

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILID------------QPVMKRAIADIALDIA 367
               + +    +  +++ YAR+R   G  + D               ++R +      + 
Sbjct: 310 IGAGATALGYTAYLKSVAYARQRPQ-GRPVADKDPTTPQMPIVAHSDVRRMLLAQKSYVE 368

Query: 368 AATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421
            A AL        DE K+   EA          ++ PITK W  +   A    A++  GG
Sbjct: 369 GALALVLYCGRLLDEQKTAPAEADRERAQLLLDLLTPITKSWPAQWCLAANDLAIQVHGG 428

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSS 479
            GY  +  + +H+R++  N+I  G+     LD+L      +     E L  T+   +  +
Sbjct: 429 YGYTRDYDVEQHWRDNRLNAIHEGTHGIQALDLLGRKVTMRDGAALELLLETIRGTVTRA 488

Query: 480 GKK---VITILRDSISLCKEDKGLARFL----TEKIALASSAAALYRAGMNDIADVFLEN 532
            K       +     +       + R L      ++ALA+++  L   G   IA ++LE 
Sbjct: 489 WKAEGFASELAGQLGAAVDRIAVVTRRLWAPGDPELALANASVYLEAVGHVVIAWMWLEQ 548

Query: 533 RF 534
             
Sbjct: 549 VL 550


>gi|311108119|ref|YP_003980972.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762808|gb|ADP18257.1| acyl-CoA dehydrogenase, middle domain protein 14 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 65/355 (18%), Positives = 133/355 (37%), Gaps = 30/355 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R     GL   +   +                           ++S S  +AS++A   +
Sbjct: 44  RAMRDYGLIGGLLPEADGGFGLPMTTYGTLIAEVASTWPSLRGMLSVSNLAASVLAGAGS 103

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             + + + P I                       L+E   G+D A + ++ +++  G + 
Sbjct: 104 AGLREKYLPAILDG-------------RAICCFALSEPGIGSDAANVQTRVERMPSGGWR 150

Query: 228 LSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           ++G K ++++  + D  I+ A+     G   V  L+ +    G     +  K+G      
Sbjct: 151 INGRKIYITNGPICDLGIVFARNVSGEGAGGVSCLVFESGMPGFSCSPI-GKMGMHCCPL 209

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340
            EL F +         N+   P +   I   YL+     V+   + +AE     A+ +AR
Sbjct: 210 GELLFEDVEVPA---ENLIGEPGQAFSIAKKYLNIGRSVVAFAALGIAESSLQAALRFAR 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    ++++ +AD+   +  +  L++R A++ D     +       ++  + 
Sbjct: 267 EREQFGRPIGGFQLVQQMVADMMTQVETSRLLAYRSADALDRGLPDNA------VLCAMA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           K      A  V   A++  GG+GY     + RHYR++   SI  G+   + L + 
Sbjct: 321 KRHASDAALRVAELALQIHGGAGYTSLFPVERHYRDARHLSIGEGTNQIIGLLIA 375


>gi|313221180|emb|CBY32004.1| unnamed protein product [Oikopleura dioica]
          Length = 421

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 145/376 (38%), Gaps = 34/376 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH- 150
           E+WDK     A   + R +   GL C      +  +     + + A      A  +    
Sbjct: 63  EKWDKTHMPDA--EIWREAGEAGLLCIDTPAEYGGIGAPFEYSMVACEEQAYAGPKFYGP 120

Query: 151 -LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    T      + P + + E                 +G+TE  GG+
Sbjct: 121 GFGLHSGIVAPYITSFGTEEQKHKYIPSMTTGE-------------TISCIGMTEPSGGS 167

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+ A+ +   +  D  + L+G K F+S+  +++  ++ A+   EGR    +   L++   
Sbjct: 168 DLQAMKTNAVRDGDD-WILNGSKTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTRE 226

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
             G    +   KIG  S  T EL F++        L    G  +   +++       +  
Sbjct: 227 HKGFSKGKNLRKIGQHSYDTAELFFNDVRLPASALLGEEEGLNKGFYMMMNELPRERVGC 286

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +++ +  +  +   Y + R   GG L D+ V+K ++A+I  +I +   ++      +
Sbjct: 287 ALEALARLENAFEQTRQYTQERKAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLY 346

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +  +E A+         K +  +   + + + ++  GG GY+ E  IA+ Y  +   
Sbjct: 347 SRGELDNETASMF-------KLYATEKYVSCVNKLLQHWGGWGYMWEYDIAKEYAGARVF 399

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   M   +  
Sbjct: 400 TIYAGTSEIMKELISR 415


>gi|167847060|ref|ZP_02472568.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei
           B7210]
 gi|254194820|ref|ZP_04901250.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|169651569|gb|EDS84262.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13]
          Length = 395

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 131/367 (35%), Gaps = 31/367 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
           A+ R     GL        +             AR           +MS  S      + 
Sbjct: 53  AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 113 EFGSDAQKEKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMVTRARKVLG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+++   G   +   + +    GL    +  K+G R+
Sbjct: 160 GYSLSGSKMWITNAPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T E+     F     + N+             L+SA   ++   +  AE+  +  R  
Sbjct: 219 SITGEIVLDEAFVP---EENILPHVKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-------AVEITS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRA 387

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 388 QTGIQAF 394


>gi|152984092|ref|YP_001351076.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150959250|gb|ABR81275.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 600

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 77/455 (16%), Positives = 161/455 (35%), Gaps = 64/455 (14%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A + +      ++ +A+
Sbjct: 76  PEVKPAVDAFLDAGFLNATRSFEQGGMQLPTLLSQACFAHFQAANVGSSAYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +               PM +      + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGSEEQKQRFL-------------QPMIEGRFFGTMALTEPHAGSSLSDIRTRAEA 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y + G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AADGSYRIRGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNADGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GPRNDVILAGLFHKMGYRGTTSTALNFGDNGACVGYLVGKPHQGLAYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R       G         +I    ++R +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRLPDGKDPSAPQVPIIRHADVRRMLLAQKTYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+       + R +      ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDSQTLEDDEQRRQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             E  + ++YR++  N I  G+     LD+L                + Q+ G+  +++ 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG-------------RKVGQNNGAGLRQLT 469

Query: 485 TILRDSISLCKEDKGLA--RFLTEKIALASSAAAL 517
            +++D+    +    LA  R   E++    S   L
Sbjct: 470 RLIQDACRRAEAHPSLAALRQPLERLVARLSEVTL 504


>gi|115373995|ref|ZP_01461285.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|310825230|ref|YP_003957588.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115369002|gb|EAU67947.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|309398302|gb|ADO75761.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 605

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 104/579 (17%), Positives = 210/579 (36%), Gaps = 92/579 (15%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +   + LE      ++  A   +  A+++ P L           +V   P     ++   
Sbjct: 41  TAARQTLETFAHVAVNEIAPSFSE-ADHHPPLLKD--------GEVTLPPLLRRAVKAFY 91

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G++          +    +    A  L   A   A      ++  A ++ ++ T    
Sbjct: 92  DSGMNLLDLPTHMGGLGAPPSLGWAAFELIAGANPAAAFYGLGTLV-ARVIDMLGTESQK 150

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P I  R +  T             + LTE   G+D+ A  ++ + +   ++ + G 
Sbjct: 151 RRYLPAINERRWIGT-------------MVLTEPDAGSDVGAARTRARHVGGDVWEIEGV 197

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275
           K F++S   D       ++LA+ EG       +  F+VP+   +     G  NG+    L
Sbjct: 198 KRFITSGEHDASENIVNMVLARPEGAGPGTKGLSLFIVPKFWVEEDGRMGERNGVVCTNL 257

Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G + + T EL F +     G L+G+++     +  +     +   I S++ +  + 
Sbjct: 258 EKKMGIKGSVTCELTFGDGKPARGLLVGEVHEGIRQMFHIIEQARMGVGIKSMATLSTAY 317

Query: 333 AEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ + R R                  +   P ++R +           AL    A+  
Sbjct: 318 LNALAFTRERVQGSDLLAARDKTAPRVPIHRHPDVRRMLMAQKAHAEGMRALILFTASIQ 377

Query: 381 DE-----AKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           D+         +E A   A   ++ P+ K +C + A  ++A +++C+GGSGY+ +  I +
Sbjct: 378 DQVALKGGHRATEAAELDAINDLLLPLVKGYCSEKAYELLAVSLQCLGGSGYLTDYPIEQ 437

Query: 433 HYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRD 489
           + R+   +S+  G+ +   LD+L   +   G    + L   + Q   S  G K +   R 
Sbjct: 438 YVRDQKIDSLYEGTTHIQALDLLLRKVARDGGATLQGLLGRVRQTADSDLGGKDLAEERA 497

Query: 490 SISLCKED---------------------------KGLARFLTEKIALASSAAALYRAGM 522
           ++     D                             +A      + +  SA AL R   
Sbjct: 498 ALGQALTDVETMLGALMGKLGESLYHVGFQGNRVLMAVAELFIGWLLVQHSAVALERIQS 557

Query: 523 NDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYLD 561
           +     F E +          +L G  +AA +++   LD
Sbjct: 558 HASDKAFYEGKRASARWFCREVLPGLSHAARMVERSTLD 596


>gi|262376460|ref|ZP_06069689.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308599|gb|EEY89733.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 399

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 129/377 (34%), Gaps = 34/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
             +  PA    +      GL        +        ++ + A  +  +           
Sbjct: 48  HEKTDPAIFREMG---ELGLLGPTIPEQYGGAGLNYVSYGLIAREVERVDSGYRSMASVQ 104

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + EY                 GLTE   G+D  ++
Sbjct: 105 SSLVMVPINEFGSEEQKQKYLPKLATGEY-------------IGCFGLTEPDYGSDPGSM 151

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++ +K+  G        W  +SP++D F++ A+ V        +   + +    GL   
Sbjct: 152 ITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAP 211

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +  K+G R++ T E+   N F           G          L+SA   ++   +  A
Sbjct: 212 AIHGKVGLRASITGEIVMDNVFVPEENAFPEVRGLK---GPFTCLNSARYGIAWGAMGAA 268

Query: 334 EAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E        Y   R   G  L    ++++ +AD+  +IA    ++ R     DE  +  E
Sbjct: 269 EFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVE 328

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                     + K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +
Sbjct: 329 -------GTSLIKRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHD 381

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 382 VHAL-ILGRAQTGIAAF 397


>gi|27377727|ref|NP_769256.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27350872|dbj|BAC47881.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 404

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 127/371 (34%), Gaps = 37/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL        +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D A + ++ +K+S
Sbjct: 122 YAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDPAGMKTRAEKVS 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFVLEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 227 ASITGEVVMDGVVVPEDALLPNVSGLKGP------FGCLNRARYGISWGALGAAEDCMHR 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +IA     S R+    DE K       +A 
Sbjct: 281 ARQYTLDRKQFGKPLAATQLVQKKLADMETEIALGLQGSLRVGRLMDEGK-------FAP 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +
Sbjct: 334 EMISIMKRNNCGKALDIARVARDMHGGNGISIEYHVMRHVHNLETVNTYEGTHDVHALIL 393

Query: 455 LNLLEKGTNLF 465
              +      F
Sbjct: 394 GRAITGIQAFF 404


>gi|46199877|ref|YP_005544.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
 gi|46197504|gb|AAS81917.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus
           HB27]
          Length = 387

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 147/385 (38%), Gaps = 38/385 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQ 145
           PG    D+    P    L+R+    G+  ++   ++       R  A  + A   Y  A 
Sbjct: 28  PGAAERDRTGAFP--WDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGA- 84

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A  + S +  +   + L  +    + + PK+ S E                  GLTE 
Sbjct: 85  -LALTVASHNSLATGHILLAGSEAQKEAFLPKLASGE-------------ALGAWGLTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----CFLVPRL 261
             G+D AA+ ++ +K+  G       ++     ++  ++++A+ +           +   
Sbjct: 131 GSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAF 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
                  GL   R + K+G  ++ T +L   + F      L        D  +L  LD  
Sbjct: 191 AFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYD--VLRVLDGG 248

Query: 322 IMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++ M V L +A         + R   G  + +   +   +A+ A ++ AA  L  + 
Sbjct: 249 RIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKA 308

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  +  + EAA A       K +  + A     EA++ +GG GY+++  + R++R+
Sbjct: 309 AELKDAGRPFTLEAAQA-------KLFASEAAVRACDEAIQILGGYGYVKDYPVERYWRD 361

Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461
           +    I  G+   + L +   L + 
Sbjct: 362 ARLTRIGEGTSEILKLVIARRLLEA 386


>gi|120405159|ref|YP_954988.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957977|gb|ABM14982.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 382

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 140/376 (37%), Gaps = 35/376 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEA 148
           V  +P W         +  R    G+        +    +    + +        A +  
Sbjct: 26  VPHYPQWEKGGRMPREVFERMGGLGILGVAIPEEYGGGGQPDYRYNVVLQEEAARALVTL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +                    W P + S              +V   + +TE   G
Sbjct: 86  STVRTQLEVILPYFLHYANDEQRDRWFPGLASG-------------TVLTAIAMTEPGTG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDG 265
           +D+A + +   +  D  Y ++G K F++  M +D  I++A+   +       +  L+ + 
Sbjct: 133 SDLAGMRTTAVRDGDD-YIVNGAKTFITGGMQADLVIVVARTSTDPDNRRKGLTLLVVED 191

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
             +G    R   K+G +   T EL F +       +LG+++ + G +        L  A+
Sbjct: 192 GMDGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEAFGYLGHNLAQERLTVAV 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            SV+  R ++A AI Y + R   G  +      K  +A  + ++ AA A+  R  +   E
Sbjct: 252 GSVAQARSAIAAAIEYTQSRKAFGTPVASFQNTKFELAACSTEVEAAQAMLDRAVSLHVE 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +AA        TK +C +M   V+   ++  GG GY+ E  IAR Y ++    I
Sbjct: 312 GELSGADAAR-------TKLFCTEMQQRVVDRCLQLFGGYGYMMEYPIARLYTDARVARI 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   M + +   L
Sbjct: 365 YAGTSEVMKVMIAKSL 380


>gi|319943206|ref|ZP_08017489.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743748|gb|EFV96152.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 395

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 139/398 (34%), Gaps = 42/398 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              Q+ AR   Y   +L        R +K +       + R     GL        +   
Sbjct: 25  RMVQDSARA--YCQDKLLPRVQEAFRHEKTDVS-----IFREMGELGLLGPTIAEEYGGA 77

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                     AR           +MS         +    T    + + PK+ + E    
Sbjct: 78  GLNYVCYGLIAREVERVDSGYRSMMSVQGSLVMVPIEAFGTEEQKQKYLPKLATGE---- 133

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                    +    GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ 
Sbjct: 134 ---------LIGCFGLTEPNHGSDPGSMVTRARKVEGGYSLSGAKTWITNSPIADVFVVW 184

Query: 247 AQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+ + G++  F++     +    GL    +  K+G R++ T E+     F          
Sbjct: 185 AKDDEGQIRGFIL-----EKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPEV 239

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIA 360
            G          L+SA   ++   +  AEA + A R     R      L    ++++ +A
Sbjct: 240 RGLK---GPFTCLNSARYGIAWGALGAAEACYEAARQYTLDRKQFNRPLAANQLIQKKLA 296

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A +I+       R+    DE  +  E       +  I K   C  A  +   A + +G
Sbjct: 297 DMATEISLGLQAVLRVGRMKDEGIAPVE-------VTSIVKRNSCGKALDIARMARDMLG 349

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 350 GNGISDEYPVARHLVNLEVVNTYEGTHDIHALILGRAI 387


>gi|284045466|ref|YP_003395806.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283949687|gb|ADB52431.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 386

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 138/367 (37%), Gaps = 29/367 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             L   +   G          +    +   +  A     +A+    +    ++ +   A 
Sbjct: 40  RELWLSAGRQGFLGLGVAERHDGSGIED-FRFNAVFGEELARAGMAYASCFTIHTDVVAP 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +  + T    + W P+  S E             +   +GLTE   G+D+AA+ +   +
Sbjct: 99  YLIELATEEQQERWLPRFCSGE-------------LVTAIGLTEPDAGSDLAALRTSAAR 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             DG + ++G K F+++ +S   +++ A+         +     +    G       +KI
Sbjct: 146 DGDG-WVINGSKTFITNGLSADLVVVAARTSSGERGKGITLFAVEHGTPGFSRGAKLDKI 204

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G     T EL F +       ++G++++    + +      L +A  +++  R +L + +
Sbjct: 205 GQVEADTGELFFEDARVPAENVIGEVDMGFRLMMERLPQERLSAACSNLAHAREALDQTL 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +     ++  IA++  ++    A   R   +    +  + +AA     
Sbjct: 265 RYVDERRAFGRRIGSFQHIRFGIAELVTELDVTQAYVDRCLAAHAAGEFTAIDAAK---- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K+W  ++   V+   ++  GG GY+ E  +AR + ++    I  GS   M   +  
Sbjct: 321 ---VKWWSAEVQNRVLDACVQYHGGYGYMREYDVARAWTDARVTKIWAGSNEIMKEIIGR 377

Query: 457 LLEKGTN 463
            L  G +
Sbjct: 378 SLGLGED 384


>gi|197124630|ref|YP_002136581.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196174479|gb|ACG75452.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 580

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 155/489 (31%), Gaps = 54/489 (11%)

Query: 84  LHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLY 141
           L   G     WD+  E  P +   L+     GL   +       +        R    L 
Sbjct: 48  LGGRGADFRAWDRAGEMPPGFVQELK---DAGLFSLVVPEHHGGMGLGATAYARVIQELG 104

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A  + + S      + L  T      + P++ + E             +     
Sbjct: 105 RYDASVAVTVGAHSSIGMRGLLLFGTEEQKARYLPRLATGE-------------LIAAFC 151

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A+I +   +  D         W  +  ++D F + A+     G   +   
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDDWILNGEKLWITNGGIADFFTVFAKTSLE-GRGHITAF 210

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
           +      G+     ++K+G R+++T  +   +        L     G    MKIL     
Sbjct: 211 IVTRDMKGVTTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVAMKILNAGRT 270

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  AA ++   +A 
Sbjct: 271 GLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCYAAESVVNMVAG 330

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D     ++      + A I+K    +       EA++   GSGY+ E       R++ 
Sbjct: 331 LVDRGFEETQ------VEAAISKVLASESVWRTADEALQIAAGSGYMREMPYEMALRDTR 384

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+   + L +        N   Q  + + + +       I          K   
Sbjct: 385 INRIFEGTNEILRLFIA---LTAVNDLGQELADVAESMKGVLADPIKGFGVMSDYAKRRA 441

Query: 499 GLA--------RFLTEKIALASSAA---------------ALYRAGMNDIADVFLENRFL 535
            LA        ++     ALA  AA                L R G   +    L  R  
Sbjct: 442 ALATGLRRKKGKWTMLHPALAEDAAVFEAAATDLAIAADKLLRRYGKKIVGAQLLTKRLA 501

Query: 536 DNCHSTHCM 544
           D       +
Sbjct: 502 DAMIDLFTL 510


>gi|319762133|ref|YP_004126070.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317116694|gb|ADU99182.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 398

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 129/366 (35%), Gaps = 31/366 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ S E+                 GLTE   G+D  ++ ++  K+  G  
Sbjct: 116 SEAQKQKYLPKLASGEF-------------IGCFGLTEPDHGSDPGSMATRAYKVDGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ VE       +   + D    GL    +  K+G R++ 
Sbjct: 163 LKGNKMWITNSPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   + F           G          L+SA   ++   +  AE   +  R    
Sbjct: 223 TGEIVMDDVFVPEENAFPEIRGLK---GPFTCLNSARFGIAWGAMGAAEFCWHTARQYTL 279

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +IA     + R+    DE ++  E       +  + 
Sbjct: 280 DRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRVGRMKDEHQNVVE-------ITSLI 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 333 KRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 391

Query: 461 GTNLFE 466
           G   F 
Sbjct: 392 GIAAFA 397


>gi|288923462|ref|ZP_06417584.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345195|gb|EFC79602.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 384

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 135/372 (36%), Gaps = 28/372 (7%)

Query: 94  WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             ++E    +   L+ +    G++       +          +          +     M
Sbjct: 27  VQELEHSNTYPEKLIEQMKQLGIYGLAIPEPYGDAPVSMPAYVAVTEELARGWMSLAGAM 86

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A ++    T    + + P++ + E   T             + LTE  GG+D+ 
Sbjct: 87  GGHTVVAKLLLQFGTEEQMQHYLPRMATGEIRAT-------------MALTEPGGGSDLQ 133

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGL 270
           A+T+  ++  D         W  ++  S    +L + + RV      +  LL +  P GL
Sbjct: 134 AMTTTARQDGDEYVVSGSKTWISNARRSQLIALLCKTDPRVEPAHTGISVLLVEHGP-GL 192

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVS 326
              R   K+G +   + E+ F          L      G  + MK L    +  A  ++ 
Sbjct: 193 TVSRDLPKLGYKGVESCEISFDGYRTPTSAVLGGTPGRGFAQMMKGLETGRIQVASRALG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L +A+ YA+ R   G  +     +   +AD+A  ++AA  L+   A  +D  +  
Sbjct: 253 VAQAALDDALAYAQERESFGRPIWKHQSIGNYLADMATKLSAARQLTLHAAELYDAGRRV 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A       K +  ++A  +   A+   GG GY  E  + R++R++P   +  G+
Sbjct: 313 DMEAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGT 365

Query: 447 GNAMVLDVLNLL 458
                  +   L
Sbjct: 366 NEIQRNVIAAQL 377


>gi|171057898|ref|YP_001790247.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775343|gb|ACB33482.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 386

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 18/294 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237
              E       P  +      + +TE   G+D   I +  +K  D  + L+G K F+S  
Sbjct: 102 CQGEQVERWLKPTVRGDRTCAIAITESGAGSDAQGIKTHAKKT-DSGWVLNGSKHFISDG 160

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             SD F++ A+     G   +   + D    G    + +  +G R    +EL F N    
Sbjct: 161 EWSDFFLVSART----GEKDISLFMVDKGLPGFTVGKDQKMMGLRGTPHLELFFDNVPLE 216

Query: 298 LLGDLNV-STGPVEDMKIL--IYLD-SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
            +  L     G    M +L  + L      +V      L     YA  R   G  + D  
Sbjct: 217 PVAMLGEQGQGFKMAMGVLGVVRLGQVGARAVGKACHVLELMTAYANERRQFGQRIGDFQ 276

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD  ++I A+  +    A   D           AR    + K    +M   V+ 
Sbjct: 277 LVQQMLADSVMEINASRLMVLHTAAMIDAGID-------ARDWIAMVKVHASEMLGRVVD 329

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFE 466
             ++  GG G+ +E  I R+YR++    I  G+       +   +L++G  LF+
Sbjct: 330 RGVQLFGGMGFCKELPIERYYRDARVYRIFDGTSEIHRTVIARSVLKRGAALFD 383


>gi|88802294|ref|ZP_01117821.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
 gi|88781152|gb|EAR12330.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P]
          Length = 602

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/443 (16%), Positives = 155/443 (34%), Gaps = 43/443 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            +++++   G         +  +       +                        +M + 
Sbjct: 66  EVMKKAGELGFLGVAVPEEYGGMGMGFVSTMLTCEYISSGNGSLSTAFGAHTGIGTMPIT 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + +  K+ + E+                  LTE   G+D  +  +     +D
Sbjct: 126 LYGTVEQKQKYVSKLATGEWMG-------------AYCLTEPGAGSDANSGKTAAVLSAD 172

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                      W  ++   D  I+ A++  +  +  F+V    E   PNG+     ++K+
Sbjct: 173 EKTYTINGQKMWISNAGFCDLMIVFARIEDDKNITGFIVEYDREK--PNGIVLGEEEHKL 230

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R+++T ++ F++T       L+V  G  +   +   +  +  A   +   R     A+
Sbjct: 231 GIRASSTRQVFFNDTVIPAENMLSVRGGGFKIAVNALNVGRIKLAAACIDSQRRITETAL 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--------SFDEAKSRSE 388
            YA  R      + D   +K  +A++A ++ A  + S+R A           +E  S SE
Sbjct: 291 KYATERKQFKTSIADFGAIKGKLAEMATNVYAGESASYRAAKDIEDRIALRLEEGNSHSE 350

Query: 389 EA----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                     I   I K    +   A   E ++  GG G+ EE  +   +R++  + I  
Sbjct: 351 AELKGVEEYAIECSILKVTVSEDVQACADEGIQIFGGMGFSEETPMEAAWRDARISRIYE 410

Query: 445 GSGNAMVLDVLNLL-EKGTNLFEQLFS---TLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           G+     +  + +L +K       L      + ++L            +     +E + +
Sbjct: 411 GTNEINRMLSVGMLVKKAMKGHVDLLGPATAVAEELMGIPSFDTPDYSEL--FAEEKEMI 468

Query: 501 ARFLTEKIALASSAAALYRAGMN 523
           A+   +K+ L  + +A+ + G  
Sbjct: 469 AKL--KKVFLMVAGSAIQKFGPE 489


>gi|298245188|ref|ZP_06968994.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297552669|gb|EFH86534.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 397

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 123/369 (33%), Gaps = 36/369 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      GL     D      +    + +    L          +      +   + 
Sbjct: 59  RELIPEIAELGLLGMHLDGYGCAGLSAVCYGLACQELEAGDSGLRSFVSVQGSLAMYPIY 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P++   E             V    GLTE   G++ A + +  ++  D
Sbjct: 119 AFGSEEQKEHWLPRMARGE-------------VIGCFGLTEPDFGSEAAGMRTSARRDGD 165

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ E  +  FLV R        G     + +K+  R+
Sbjct: 166 EYILNGTKMWITNGGVADLAVVWARAEDGIRGFLVER-----GTPGFTTSDIHHKLSLRA 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIH 337
           + T EL F          L      V+ M+  L  L+ A   +        R     A+ 
Sbjct: 221 SVTSELHFEECRVPASNML----PNVKGMRGPLSCLNEARFGISWGVTGAARACFETALE 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R      +    +++R +A +A ++  A  L+ +L    DE      +        
Sbjct: 277 YAKTRVQFKRPIASFQLVQRKLALMATELVKAQLLTLQLGRLKDEELLHPVQ-------I 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C+ A     EA   +G +G   E  I+RH     +     G+ +   L +   
Sbjct: 330 SLAKRNNCREALETAREARSILGANGITLEYPISRHMNNLESVFTYEGTDDIHTLIIGQA 389

Query: 458 LEKGTNLFE 466
           L  G N FE
Sbjct: 390 LT-GINAFE 397


>gi|254773971|ref|ZP_05215487.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 382

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A  
Sbjct: 114 PTLAGEKIGSLAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAAGVSLLVVEKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIGLATQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       ++               K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRNVVERQLAGETN------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR      I  G+   +      LL
Sbjct: 347 ESEVERQYRGMRILGIGGGTTEILTALSAKLL 378


>gi|312138525|ref|YP_004005861.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325676189|ref|ZP_08155869.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311887864|emb|CBH47176.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325552973|gb|EGD22655.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 381

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 135/363 (37%), Gaps = 29/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA---GHLMSPSVTSAS 160
             +   +   G+       ++             A   L A   A      +   + +  
Sbjct: 40  REVWHEAGKQGILGLEIPEAYGGGEAGDYRFNAVATEELAAVNMALASSFGIHFDIVTPY 99

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           +V L  +    + W P++ + E                 +G+TE   G+D+A + +   +
Sbjct: 100 VVDL-ASEEQKQQWLPRMAAGE-------------AVAAIGMTEPSAGSDLANLKTSAVR 145

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                + LSG K F+++   +D  ++ A+ +       +   L D S  G    R  +K+
Sbjct: 146 DGSD-WILSGSKTFITNGYTADVVVVAARTDPTQRSKGISLFLVDTSLPGFERGRKLDKV 204

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           G     T EL F          L    TG V  M+ L    + +A+ +V+  +  L E I
Sbjct: 205 GQPEADTAELFFDEIRLPADAMLGEPGTGFVSMMERLPQERIGAAVTNVAHAKQILLETI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  +      K  +A++   I  A A         D A +   ++  + + 
Sbjct: 265 EYAKERKAFGNSIGSFQHNKFLLAELVTKIEVAQAY-------IDAAVAEHSDSGLSAVD 317

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K+W  ++   V+   ++  GG G++ E  +AR + ++    I  GS   M   +  
Sbjct: 318 AAKAKWWSAQVQNEVLDHCVQLHGGYGFMREYRVARAWMDARVTKIWAGSNEIMKEIIGR 377

Query: 457 LLE 459
            LE
Sbjct: 378 DLE 380


>gi|296393369|ref|YP_003658253.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296180516|gb|ADG97422.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 380

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 130/368 (35%), Gaps = 35/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ----------LEAGHLMSP 154
            L R  +      ++    F  +     H       +              L    +   
Sbjct: 32  WLARGIVDRDFWSAMGQNGFLGIAIPTEHGGGGVEDFRFNMVLVEEPLRLWLSGIGITYQ 91

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +   +    +      W P++ S E               + + +TE   G+D+ ++
Sbjct: 92  EDMTLPYLLKYGSEEQKARWLPQVASGE-------------RILAVAMTEPCAGSDLQSM 138

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +      D  + L+G K F+S+ + +D  ++ AQ E   G   +     +    G    
Sbjct: 139 QTTALPKGDD-WLLNGSKIFISNGVNADLVVVAAQTEPGSGAKGITLFAVERGMAGFERG 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R   KIG R+  T EL F +       ++G++      + +      L  A+ + + +  
Sbjct: 198 RKLEKIGRRAQDTAELFFDDVLVPAENVIGEVGKGFSYLMESLPQERLAIAVAAAAEIDA 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++  A  YAR R   G  +      +  +AD+A   AA  AL  R A      +  + +A
Sbjct: 258 AIELASDYARERKAFGKPIAKFQNTRFLLADLAAQQAAVRALVDRCAQERLRGELTANDA 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A         K +  +    ++   ++  GG GY+ E  IA+ Y ++   +I  G+   M
Sbjct: 318 A-------AVKLYATERQLHIVDRCLQVHGGYGYMLEYPIAQLYTDARVQTIYGGTSEVM 370

Query: 451 VLDVLNLL 458
              V   L
Sbjct: 371 KEIVARSL 378


>gi|126728864|ref|ZP_01744679.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
 gi|126710794|gb|EBA09845.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
          Length = 386

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 101/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CEGEQVEKYLMPAVRGEKMDALAMTEPDAGSDVRGMKCSAVRDG-GDWVVNGSKHFISGA 159

Query: 239 MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G     R     +   L D    G    R  N + +R      L F N
Sbjct: 160 EHADFVIVFVATGVDETPRGPKKRITCFLVDRGTPGFEIARGYNSVSHRGYQNSILYFDN 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A  SV   R     A+ YA  R   G  + 
Sbjct: 220 CRLSDAQVLGEVDGGFDVMNEWLYATRITVATNSVGRARRVYDHAVQYAAERKQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADWLTLAAAWRLDQGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V   A++  GG G ++E  I R +R++    I  G+       +   + +
Sbjct: 333 VTDAALQIHGGMGLMDELPIERFWRDARVERIWDGTSEIQRHIISREIFR 382


>gi|83854753|ref|ZP_00948283.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83941276|ref|ZP_00953738.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83842596|gb|EAP81763.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83847096|gb|EAP84971.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 407

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 136/407 (33%), Gaps = 45/407 (11%)

Query: 68  CTAQELARMANYNTPQLHAY--GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE AR   Y   +L                  PA    +      GL        + 
Sbjct: 36  RMIQESARA--YAQEKLQPRVIDAFANET----TDPAIFREMG---DMGLLGVTVPEQYG 86

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +          AR           +MS  S      +    +      + PK+ S E+ 
Sbjct: 87  GLGGNYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRMKYLPKLSSGEF- 145

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                           GLTE   G+D A + ++  K ++G        W  ++P++D F+
Sbjct: 146 ------------IGCFGLTEPDAGSDPAGMKTRAVKTANGYKLTGSKMWISNAPIADVFV 193

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ E   G   +   + +    GL   ++ NK+  R++ T E+   N         + 
Sbjct: 194 VWAKSEEHGGK--IRGFILEKGMKGLSAPKIGNKLSLRASITGEIVMDNVEV----GEDA 247

Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRA 358
               VE +K     L+ A   +S   +  AE   +A R     R      L    + ++ 
Sbjct: 248 LLPHVEGLKGPFGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKK 307

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +IA     S ++    D A +       A  M  I K   C  A  +   + + 
Sbjct: 308 LADMQTEIALGLQASLQVGRLMDNANA-------APEMISIVKRNNCGKALDIARMSRDM 360

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            GG+G   E  + RH       +   G+ +   L +L   + G   F
Sbjct: 361 HGGNGISGEFQVIRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|220919351|ref|YP_002494655.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219957205|gb|ACL67589.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 580

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 86/489 (17%), Positives = 155/489 (31%), Gaps = 54/489 (11%)

Query: 84  LHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLY 141
           L   G     WD+  E  P +   L+     GL   +       +        R    L 
Sbjct: 48  LGGRGADFRAWDRAGEMPPGFVQDLK---DAGLFSLVVPEHHGGMGLGATAYARVIQELG 104

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A  + + S      + L  T      + P++ + E             +     
Sbjct: 105 RYDASVAVTVGAHSSIGMRGLLLFGTEEQKARYLPRLATGE-------------LIAAFC 151

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A+I +   +  D         W  +  ++D F + A+     G   +   
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDDWILNGEKLWITNGGIADFFTVFAKTSLE-GRGHITAF 210

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
           +      G+     ++K+G R+++T  +   +        L     G    MKIL     
Sbjct: 211 IVTRDMKGVTTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVAMKILNAGRT 270

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  AA ++   +A 
Sbjct: 271 GLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCYAAESVVNMVAG 330

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D     ++      + A I+K    +       EA++   GSGY+ E       R++ 
Sbjct: 331 LVDRGFEETQ------VEAAISKVLASESVWRTADEALQIAAGSGYMREMPYEMALRDTR 384

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+   + L +        N   Q  + + + +       I          K   
Sbjct: 385 INRIFEGTNEILRLFIA---LTAVNDLGQELADVAESMKGVLADPIKGFGVMSDYAKRRA 441

Query: 499 GLA--------RFLTEKIALASSAA---------------ALYRAGMNDIADVFLENRFL 535
            LA        ++     ALA  AA                L R G   +    L  R  
Sbjct: 442 ALATGLRRKKGKWTMLHPALAEDAAVFEAAATDLAIAADKLLRRYGKKIVGAQLLTKRLA 501

Query: 536 DNCHSTHCM 544
           D       +
Sbjct: 502 DAMIDLFTL 510


>gi|297617067|ref|YP_003702226.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144904|gb|ADI01661.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 610

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 84/467 (17%), Positives = 172/467 (36%), Gaps = 61/467 (13%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           AN +  ++     GG     V    ++  +    +  GL     DRS E      +    
Sbjct: 59  ANKDADEIGMKFVGGNE-QAVVSPESFKKVYNTVMEAGLGPQFGDRSAEG-RMPLSWYAP 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              +   A          +  + +++    +  +   + PK+++ E+  T          
Sbjct: 117 ILEMQTAASPAIVMFWCLTQGATTIIQYNCSEFLKNLFLPKMYTGEWAGT---------- 166

Query: 197 AIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV- 249
              + LTE + G+D+ A+ ++       GIY + G K F++S   D       ++LA+  
Sbjct: 167 ---MCLTEPQAGSDLNAVATRAFPTDKKGIYKIKGQKCFITSGDHDLSKNIIHMVLAKTP 223

Query: 250 -----EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFG 296
                   +  F+VP+   D     G  N +    +++K+G   ++T  L F    N +G
Sbjct: 224 DALPGTAGISLFIVPKFWVDENGNVGGWNDVTTVGIEHKMGLHGSSTCTLAFGENDNCYG 283

Query: 297 FLLGDLNVSTGP-----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGI 348
           +L+G+  V         +  M     L++ + ++  +  +   A+ Y + R         
Sbjct: 284 YLVGEEPVGGRGKGLSYMFQMMNEERLNTGLFALGTITSAYYAALDYTKIRVQSPSFKNP 343

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIM 396
                 +I+   ++R +      + A  AL +      D      + A          I 
Sbjct: 344 KGPAVRIIEHEDVRRMLMYQKSCMEAIRALIYSTYFHVDLIHDSPDPAEREWADDVFMIQ 403

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P+ K +   MA  + AEA++C GG GY+EE + A   R+    +I  G+      D+  
Sbjct: 404 NPLCKAYSSDMAWLLTAEAIQCHGGYGYMEEYAPASLARDCKIYAIWEGTNFIQANDLTG 463

Query: 457 L---LEKG---TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               ++KG       + +   + Q           ++ ++ +  K+ 
Sbjct: 464 RKFSMKKGEPFRKWVDAIGEFIAQKKTPEFANEFAMMEEAFATYKQI 510


>gi|182438562|ref|YP_001826281.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326779209|ref|ZP_08238474.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178467078|dbj|BAG21598.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326659542|gb|EGE44388.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 385

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 144/395 (36%), Gaps = 40/395 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A +A    P    +   G+         A      +    G+     D  +       +H
Sbjct: 19  AFIAAEVVPVYDEWFAAGQ---------APRDFYLKLGELGVFGIEVDEEYGG-AGIDSH 68

Query: 134 KIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           K  A      A+       S   ++     + ++ T    K W PK  + E         
Sbjct: 69  KYEAVIYEETARAGVSFGGSGVHTLLGLPYIKMLATGEQKKRWLPKFATGEEM------- 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV 249
                   L +TE   G+D+A + +  +   DG  Y L+G K F++  + +D  I+ A+ 
Sbjct: 122 ------WALAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCART 175

Query: 250 EG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
                    F +     D    G    R  +K+G + + T EL F +       L+G+ N
Sbjct: 176 AAPREDDRRFGISLFAVDTKSEGYSVGRKLDKLGLKVSDTAELAFVDVKVPVEDLMGEEN 235

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
              G +           A  + +    ++  A  Y + R V G  +      K  +A   
Sbjct: 236 KGFGYLGTNLASERWGIAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQ 295

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ++ AA A++ R   + D  +  + EAA A       K +C ++A  VI   ++  GG G
Sbjct: 296 AEVDAAQAVADRALEALDAGELTAAEAASA-------KLFCTEVAHRVIDRCLQLHGGYG 348

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ E  IAR Y ++  N I  G+   M   +   +
Sbjct: 349 FMNEYPIARLYADNRVNRIYGGTSEVMKSIIAKSM 383


>gi|119898215|ref|YP_933428.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670628|emb|CAL94541.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 395

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 132/384 (34%), Gaps = 44/384 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P++       ER D+  F+             GL        +             AR  
Sbjct: 41  PRVQEAFRH-ERTDREIFNEMG--------ELGLLGPTIPEQYGGAGMNYISYGLIAREV 91

Query: 142 LMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                    +MS  S      +    T    + + PK+ + E+                 
Sbjct: 92  ERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLATGEW-------------VGCF 138

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A+ + G +  F++ 
Sbjct: 139 GLTEPNHGSDPGSMITRAKKVPGGYSISGAKMWITNSPIADVFVVWAKDDEGDIRGFVL- 197

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
               +    GL    +  K+G R++ T E+     F           G          L+
Sbjct: 198 ----EKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLK---GPFTCLN 250

Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           SA   ++   +  AEA +     Y   R   G  L    ++++ +AD+  +I        
Sbjct: 251 SARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLVQKKLADMLTEITLGLQACL 310

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++    D   +  E       +  I K   C  A  +   A + +GG+G  +E  +ARH 
Sbjct: 311 QVGRLKDAGNAPVE-------ITSIIKRNSCGKALDIARTARDMLGGNGISDEFCVARHL 363

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
                 +   G+ +   L +   +
Sbjct: 364 VNLEVVNTYEGTHDIHALILGRAI 387


>gi|326333699|ref|ZP_08199933.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325948477|gb|EGD40583.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 392

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 130/377 (34%), Gaps = 22/377 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P   +WD+    P    ++ +    GL       ++        A  +    L  + Q  
Sbjct: 26  PHASQWDRDHHFPV--DVVHKMGELGLFGLTAPEAYGGGDGDLVALCVAIEELGRVDQSI 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L +      + +    T    + W P + +                  G GLTE   
Sbjct: 84  GITLEAAVGLGINPILTYGTNEQKERWLPDLVAG-------------KKLAGFGLTEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQV-EGRVGCFLVPRLLED 264
           G+D  A  ++     D        ++  +S   ++    + A+      G   +  ++  
Sbjct: 131 GSDAGATATKAVLDGDEWVVDGAKQFITNSGSSITSVVTVTARTGTRENGKPEISTIMIP 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   ++  +K+G  ++ T  L F          L     G  + +  L    +  A
Sbjct: 191 SGTPGFTAEKAYDKLGWHASDTHPLSFDGARVPADHLLGERGRGYAQFLATLDDGRVAIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            ++V  ++  L  A+ YA  R   GG +  +  +   IAD+ + + A+  L++  A    
Sbjct: 251 ALAVGCIQACLDMALEYAGERQTFGGPIGRKQGVAFQIADLEVMLRASRLLTYEAAAMKS 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              S +      +  A   K +  + A      A +  GG G++EE  +AR YR++    
Sbjct: 311 GLDSGAVTMKEFKQAAAAAKLYATESAVTATRIATQIFGGYGFMEEYPVARFYRDAKILE 370

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+     + +   L
Sbjct: 371 IGEGTSEVQRMLIARGL 387


>gi|95930231|ref|ZP_01312969.1| acyl-CoA dehydrogenase-like [Desulfuromonas acetoxidans DSM 684]
 gi|95133694|gb|EAT15355.1| acyl-CoA dehydrogenase-like [Desulfuromonas acetoxidans DSM 684]
          Length = 383

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 126/373 (33%), Gaps = 26/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P  H  +      GL     D+ +  + +                   
Sbjct: 27  PYAAEWDRENRFPMEH--VHALAEHGLLGICVDKQWGGLGKSLLEMALIIEGVARYDAGM 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++        V    +      + P +              K        L E   G
Sbjct: 85  ALTLAAHSLVCDHVQRFGSEAQKNRYLPGL-------------AKGEPLGAWALAEAGSG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  +I ++ Q+  DG        +     ++  ++++A+  G      +   L +    
Sbjct: 132 SDAVSIKTRAQRNGDGWQLNGRKMFVTQGSVAGLYVVMAR-SGEHKKSAISAYLVERDTP 190

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+       K+G RS+ T  + F         LLG+ + +      +     +  A ++ 
Sbjct: 191 GVTPSAPLEKLGCRSSNTTAVHFDQVQLAEEQLLGEEHRALSAAFSLLDHGRVTIAALAC 250

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  L E+  +  RR   G  +     ++  +AD+A    AA  L+ R A   D+ ++
Sbjct: 251 GIMRGCLEESQRHTARRQQFGTPINTFQAVQWPMADMATHYDAAWLLTARAAQLCDDGQT 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               AA A       K +  +MA      A++  GG GY++   + R YR++    I  G
Sbjct: 311 CGTAAAKA-------KLFAGEMAVKSAERAVQLQGGYGYLKNSCVERFYRDAKLCDIGEG 363

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 364 TAEIQRLVIAREL 376


>gi|77465195|ref|YP_354698.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77389613|gb|ABA80797.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 377

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 140/355 (39%), Gaps = 21/355 (5%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +   + +  F  +   +      A  Y+   L    + +     ++++++   P  
Sbjct: 36  IEPAVLAQMGELGFFGMTVPEEMGGVGAD-YMSYALALIEIAAGDGAVSTVMSVHNAP-- 92

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S         P  + +      LTE   G+D +A+ S+ ++   G Y + G
Sbjct: 93  FNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAG-GDYVIDG 151

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F++S  ++   I+ A++EG  G   +   L      G    ++++K+G  ++ T  L
Sbjct: 152 EKVFITSGRLAGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCAL 211

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRH 343
            F +        +       E  +I L  L++  + ++   V +A+A   A     R R 
Sbjct: 212 RFDSLRVPEALRIG---AEGEGYRIALSSLETGRIGIAAQSVGMAQAALEAAVAYARERT 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI+   +   +A+    + AA  +    A   D  +    EAA A       K +
Sbjct: 269 SFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMA-------KLF 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A  ++++A++  GG GY  +  + R YR+     I  G+ +   + +L  +
Sbjct: 322 ASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGM 376


>gi|159040257|ref|YP_001539510.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157919092|gb|ABW00520.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 394

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 132/382 (34%), Gaps = 24/382 (6%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           MA    P L  +   GE             L   +   GL    +              +
Sbjct: 20  MAKEVLPHLDDWERAGE---------VPRELHATAARIGLLGIGFPEKVGGSGGDLLDSV 70

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK----DWAPKIFSREYDPTNKAPM 191
                 + +   +G + +      ++  L+T                   +       P 
Sbjct: 71  AVTEEIIRSGGSSGLVAALFTHGIALPHLVTASDRATGDAGTGTTPAAGTDLVERYVRPT 130

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
              ++   L +TE  GG+D+A + +  ++  D  Y ++G K +++S     F+ +A   G
Sbjct: 131 LAGTMIGALAITEPGGGSDVAGLRTTARRDGDH-YVVNGAKAYITSGYRADFVTVAVRTG 189

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGP 308
             G   +  L+ +   +G    R   K+G   + T EL F++    +   +G+ N     
Sbjct: 190 GPGADGISLLVIEKGMSGFTVGRRMEKLGWHCSDTAELSFADVRVPVANRVGEENTGFLS 249

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        +  A  + +  +  +  A  + + R   G  L  + +++  +A++     +
Sbjct: 250 IMQNFAAERVSLATQAYATAQRCVELARGWCQDRETFGRPLTSRQLVRHRLAEMHTRAES 309

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A    +A      +    E A A+  A             V+  A++  GG G + + 
Sbjct: 310 VRAYVLDVATRVAAGEPAMTEIAMAKNAAV-------DACAEVVDTALQLHGGFGCMRDA 362

Query: 429 SIARHYRESPANSILLGSGNAM 450
            + RHYR+    SI  G+   M
Sbjct: 363 EVERHYRDQRILSIGGGTTEIM 384


>gi|254466093|ref|ZP_05079504.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687001|gb|EDZ47483.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 387

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 133/391 (34%), Gaps = 41/391 (10%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   ++       + ++++  GL+ +                      +L
Sbjct: 23  ELYPHEAEIERTGHLDM-DVIRDVQKKAMEAGLYAANMPEEVGGAGLDT-------LTWL 74

Query: 143 MAQLEAGHLMSPSVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           M + E G        +       + L  T    + +               P  K     
Sbjct: 75  MYEKELGRANYALHWTGVARPSNILLAGTEEQKEKYL-------------FPCMKGEKWD 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRV 253
            L +TE   G+D+  + +  +K  D  + L+G K F+S    +D  I           R 
Sbjct: 122 CLAMTEPDAGSDLRGMKATARKDGDD-WILNGTKHFISHADIADFAICFMATGVEDTPRG 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +     D    G   +     + +R      LEF +       +LG+++       
Sbjct: 181 PKKKITAFFVDKGTPGFEVRDGYGNVSHRGYTNSVLEFDDCRLPSSAILGEVDKGFEVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +     +L  +I YA  R   G  +     +   +AD+AL++ AA 
Sbjct: 241 TWLGATRLQVAATCLGRAERALQHSIEYAAERKQFGQQIGKFQGISFKLADMALELKAAN 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++     FD+      + + A++ A        +M   V  EA++  GG G ++E  +
Sbjct: 301 LLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAFVADEAIQIHGGMGLMDELPL 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R +R++    I  G+       +   + + 
Sbjct: 354 ERIWRDARVERIWEGTSEIQRHIISREMLRA 384


>gi|15609637|ref|NP_217016.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis H37Rv]
 gi|15842028|ref|NP_337065.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31793680|ref|NP_856173.1| acyl-CoA dehydrogenase [Mycobacterium bovis AF2122/97]
 gi|121638382|ref|YP_978606.1| putative acyl-CoA dehydrogenase fadE19 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662336|ref|YP_001283859.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium tuberculosis H37Ra]
 gi|148823697|ref|YP_001288451.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis F11]
 gi|167967646|ref|ZP_02549923.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis H37Ra]
 gi|215404437|ref|ZP_03416618.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|215412266|ref|ZP_03421026.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427883|ref|ZP_03425802.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|215431446|ref|ZP_03429365.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|215446750|ref|ZP_03433502.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|218754233|ref|ZP_03533029.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|219558500|ref|ZP_03537576.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|224990876|ref|YP_002645563.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798420|ref|YP_003031421.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 1435]
 gi|254232629|ref|ZP_04925956.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis C]
 gi|254366804|ref|ZP_04982846.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551547|ref|ZP_05141994.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187507|ref|ZP_05764981.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|260201625|ref|ZP_05769116.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|260205815|ref|ZP_05773306.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289444031|ref|ZP_06433775.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|289448145|ref|ZP_06437889.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|289553708|ref|ZP_06442918.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 605]
 gi|289570660|ref|ZP_06450887.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|289575205|ref|ZP_06455432.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289746282|ref|ZP_06505660.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|289751109|ref|ZP_06510487.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|289754609|ref|ZP_06513987.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|289758632|ref|ZP_06518010.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|289762668|ref|ZP_06522046.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|294994392|ref|ZP_06800083.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 210]
 gi|297635108|ref|ZP_06952888.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 4207]
 gi|297732099|ref|ZP_06961217.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN R506]
 gi|298525972|ref|ZP_07013381.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776773|ref|ZP_07415110.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu001]
 gi|306780539|ref|ZP_07418876.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu002]
 gi|306785301|ref|ZP_07423623.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu003]
 gi|306789654|ref|ZP_07427976.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu004]
 gi|306793981|ref|ZP_07432283.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu005]
 gi|306798376|ref|ZP_07436678.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu006]
 gi|306804256|ref|ZP_07440924.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu008]
 gi|306807703|ref|ZP_07444371.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu007]
 gi|306968653|ref|ZP_07481314.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu009]
 gi|306972884|ref|ZP_07485545.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu010]
 gi|307080598|ref|ZP_07489768.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu011]
 gi|307085184|ref|ZP_07494297.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu012]
 gi|313659433|ref|ZP_07816313.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2113933|emb|CAB08918.1| POSSIBLE ACYL-CoA DEHYDROGENASE FADE19 (MMGC) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882306|gb|AAK46879.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619273|emb|CAD97389.1| POSSIBLE ACYL-COA DEHYDROGENASE FADE19 (MMGC) [Mycobacterium bovis
           AF2122/97]
 gi|121494030|emb|CAL72508.1| Possible acyl-CoA dehydrogenase fadE19 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601688|gb|EAY60698.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis C]
 gi|134152314|gb|EBA44359.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506488|gb|ABQ74297.1| acyl-CoA dehydrogenase FadE19 [Mycobacterium tuberculosis H37Ra]
 gi|148722224|gb|ABR06849.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis F11]
 gi|224773989|dbj|BAH26795.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319923|gb|ACT24526.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 1435]
 gi|289416950|gb|EFD14190.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T46]
 gi|289421103|gb|EFD18304.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CPHL_A]
 gi|289438340|gb|EFD20833.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 605]
 gi|289539636|gb|EFD44214.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis K85]
 gi|289544414|gb|EFD48062.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T17]
 gi|289686810|gb|EFD54298.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis 02_1987]
 gi|289691696|gb|EFD59125.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T92]
 gi|289695196|gb|EFD62625.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis EAS054]
 gi|289710174|gb|EFD74190.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis GM 1503]
 gi|289714196|gb|EFD78208.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis T85]
 gi|298495766|gb|EFI31060.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214834|gb|EFO74233.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu001]
 gi|308326605|gb|EFP15456.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu002]
 gi|308330028|gb|EFP18879.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu003]
 gi|308333871|gb|EFP22722.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu004]
 gi|308337671|gb|EFP26522.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu005]
 gi|308341352|gb|EFP30203.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu006]
 gi|308345891|gb|EFP34742.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu007]
 gi|308349144|gb|EFP37995.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu008]
 gi|308353768|gb|EFP42619.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu009]
 gi|308357711|gb|EFP46562.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu010]
 gi|308361652|gb|EFP50503.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu011]
 gi|308365264|gb|EFP54115.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis SUMu012]
 gi|323718908|gb|EGB28062.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis CDC1551A]
 gi|326904114|gb|EGE51047.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis W-148]
 gi|328458188|gb|AEB03611.1| acyl-CoA dehydrogenase fadE19 [Mycobacterium tuberculosis KZN 4207]
          Length = 394

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 132/374 (35%), Gaps = 36/374 (9%)

Query: 100 HPAWH----ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           H A H     ++ +    GL    +   +  +     A  +    L  + Q  A  L + 
Sbjct: 39  HDAEHSFPYEIVAKMGEMGLFGLPFPEEYGGMGGDYFALSLVLEELGKVDQSVAITLEAA 98

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               A  +    T    + W P + S                  G GLTE   G+D  + 
Sbjct: 99  VGLGAMPIYRFGTEEQKQKWLPDLTSG-------------RALAGFGLTEPGAGSDAGST 145

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-------GCFLVPRLLEDGSP 267
            +  +   D  + ++G K F+++  +D   ++                  +  ++     
Sbjct: 146 RTTARLEGDE-WIINGSKQFITNSGTDITSLVTVTAVTGTTGTAADAKKEISTIIVPSGT 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G   + + NK+G  ++ T  L F++        L    +G    + IL    +  A ++
Sbjct: 205 PGFTVEPVYNKVGWNASDTHPLTFADARVPRENLLGARGSGYANFLSILDEGRIAIAALA 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               +  + E++ YA +R   G  +     +   IA +      A    +  A      K
Sbjct: 265 TGAAQGCVDESVKYANQRQSFGQPIGAYQAIGFKIARMEARAHVARTAYYDAAAKMLAGK 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +EAA A+++         + A     +A +  GG G++ E  +ARHYR+S    I  
Sbjct: 325 PFKKEAAIAKMI-------SSEAAMDNSRDATQIHGGYGFMNEYPVARHYRDSKVLEIGE 377

Query: 445 GSGNAMVLDVLNLL 458
           G+    ++ +   L
Sbjct: 378 GTTEVQLMLIARSL 391


>gi|302526131|ref|ZP_07278473.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4]
 gi|302435026|gb|EFL06842.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4]
          Length = 376

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 120/358 (33%), Gaps = 31/358 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  R+   G         +             A              SP       V  
Sbjct: 44  ELENRARRQGFWALDVPVDYGGQGLSTLGTCLVAEELFKHPAMFEFGGSPE-----PVLY 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + +               P+ K         TE  GG+D+AA+ +   +  D 
Sbjct: 99  HGTDDQKERYL-------------HPIVKEDKRCCYAFTEPSGGSDVAAMRTTAARKGDD 145

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K F+S    +D  I+ A  +  +G   V   L D    G    R    +G+  
Sbjct: 146 -WIINGTKTFISHAERADFVILFATTDRTLGARGVTCFLVDIDTPGFTLSRPIPTMGDDW 204

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               EL F +        LGD+        D      L  A   +      L  A+ +A+
Sbjct: 205 EP-FELAFDHCVVPDANRLGDVGGGWALANDQLTHGRLKIAAYQLGIAERCLDIAVEWAK 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L  +  ++  +AD A ++ AA  L +R A   DE +    EA  A++ A   
Sbjct: 264 QRVTWGKPLASRQAVQWMLADSATELEAARWLVYRAAWLADEGRPVKTEAFKAKLCA--- 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                +MA  V    ++ +GG GY +E  I   YR+     I  G+       +   L
Sbjct: 321 ----TEMAQRVTDRCLQILGGLGYSKELPIQSFYRQVRVWRIGHGTAEIHRWMIARDL 374


>gi|332525843|ref|ZP_08401984.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109394|gb|EGJ10317.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 397

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 142/412 (34%), Gaps = 46/412 (11%)

Query: 68  CTAQELARMA--NYNTPQLHAY---GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +   R A  +Y   +L          ER+D+         ++      GL     + 
Sbjct: 17  AEDERAVRDAARDYCQDKLQPRVLSAAREERFDR--------EIMSEMGALGLLGCTIEG 68

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                +   ++ + A  +  +       +   S      +    +    + + P++ + E
Sbjct: 69  YGCAGLNHVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIHAYGSEEQRQKYLPRLATGE 128

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +                 GLTE   G+D A++ ++ + +  G        W  +SP++D 
Sbjct: 129 W-------------IGCFGLTEPDHGSDPASMATRARPVDGGYVLSGSKMWITNSPIADV 175

Query: 243 FIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           F++ A+     G       +   + +    GL   +++ K+  R++ T E+     F   
Sbjct: 176 FVVWAKETDAQGAAGGQEAIRGYILERGMKGLTAPKIEGKMSLRASITGEIVMDQVFVPA 235

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSGGILIDQP 353
               N   G          L+ A   ++   +  AE   +A RR+       G  L    
Sbjct: 236 ---ENKLPGVAGLKGPFGCLNKARYGIAWGALGAAEFCWHAARRYTLERKQFGRPLAQNQ 292

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I        R+    DE ++       A  M  + K   C  A  +  
Sbjct: 293 LIQKKLADMQTEITLGLQGCLRVGRLIDEGQA-------APEMISLIKRNSCGKALDIAR 345

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A +  GG+G  +E  + RH       +   G+ +   L +L   + G   F
Sbjct: 346 LARDMHGGNGIHDEFHVIRHMINLETVNTYEGTHDVHAL-ILGRAQTGLQAF 396


>gi|150397376|ref|YP_001327843.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150028891|gb|ABR61008.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae
           WSM419]
          Length = 386

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 97/286 (33%), Gaps = 14/286 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +       P  +      L +TE   G+D+  +    +   D         +   + ++D
Sbjct: 104 DQRERYLLPAVRGDKFDALAMTEPDAGSDVRGMKCFARPDGDDWIVNGTKHFISHADIAD 163

Query: 242 AFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295
             I+          R     +   L D    G   +   N + +R      L F +    
Sbjct: 164 FVIVFIATGEEQTPRGPKKKITCFLVDRGTPGFEIREGYNSVSHRGYKNCILTFDDCRLP 223

Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              +LG+++       D      L  A  SV   R +   A+ YA  R   G  +     
Sbjct: 224 SAQILGEVHRGFDLANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPIGANQG 283

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +AD+  ++ AA  L+   A   D+          A       K +  +M   V  E
Sbjct: 284 VSFKLADMITELDAADLLTLSAAWRLDQGLP-------ANREIASAKVYATEMLARVTDE 336

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 337 AIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|299533160|ref|ZP_07046544.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718690|gb|EFI59663.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 396

 Score =  226 bits (576), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 141/409 (34%), Gaps = 44/409 (10%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A   Y   +L        R + V+       + R     GL        +  
Sbjct: 19  EDERMIRDAAREYCQDKLKPRVQAMFRNESVDVS-----IFREMGELGLLGPTIPTQYGG 73

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ + A  +  +           S      +    T      + PK+ S E+  
Sbjct: 74  AGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLASGEF-- 131

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  ++ ++  K+  G        W  +SP++D F++
Sbjct: 132 -----------IGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVV 180

Query: 246 LAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGD 301
            A+ V        +   + +    GL    +  K+G R++ T E+   + F        D
Sbjct: 181 WAKEVSEDGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPD 240

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
           +    GP         L+SA   ++   +  AE   +  R     R   G  L    +++
Sbjct: 241 VRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQ 294

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I      + R+    DE ++  E       +  + K   C  +  +   A 
Sbjct: 295 KKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCGKSLDIARMAR 347

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F
Sbjct: 348 DMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIAAF 395


>gi|302875468|ref|YP_003844101.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307689079|ref|ZP_07631525.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302578325|gb|ADL52337.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 377

 Score =  226 bits (576), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 132/363 (36%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SAS 160
             L ++ +  GL        +  +           +    A  ++G + + +       +
Sbjct: 34  KELWQKCVDFGLIGMNVPEEYGGMGLDYQTSAILLQALGYACEDSGFIFAITNHLWVCQN 93

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           +V  M +  +   +   +   EY                  +TE   G+D+  + ++  K
Sbjct: 94  LVNEMGSQALKDKYLRGMVEGEY-------------IGCFAITEVESGSDVFQMQTKATK 140

Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G+K F+S+ P++D F+++A+ E   G   +     +    G+   +  +K+
Sbjct: 141 DCDE-YILNGNKMFISNAPIADVFVVVAKTENEEGKETLTAFFVEKDFPGVSIGKKISKM 199

Query: 280 GNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  +    EL  +N            +           +  +      +  M   + + I
Sbjct: 200 GLEACPMAELCLNNCRVPKENIIYKEHKGMKVANYALQMERVFEFASHIGAMERQMEKCI 259

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R      + +   +   I D+ + I  A  L F++A   D  K+         + 
Sbjct: 260 KYANERKQFDKPIKEYQSISNKIVDMKVKIELAQLLLFKIAWKADHKKN-------IFLD 312

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + I K +  +   A   + ++  G  GY +E  +    R+S A++I  G+       + +
Sbjct: 313 SSIFKLFVSESYVATCLDTIQIHGAYGYSKEYGLESELRDSIASTIYSGTSETQRNIIFS 372

Query: 457 LLE 459
           L++
Sbjct: 373 LID 375


>gi|162457525|ref|YP_001619892.1| isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161168107|emb|CAN99412.1| Isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 387

 Score =  226 bits (576), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 133/415 (32%), Gaps = 64/415 (15%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           + + +      V+   A E  R A  N P                       L+RR    
Sbjct: 22  LRQMVRDFAREVVEPQADEHDRSATLNVP-----------------------LMRRLGEL 58

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARL-------YLMAQLEAGHLMSPSVTSASMVALMT 166
           GL                   +            + +A L    L   +   A       
Sbjct: 59  GLLGVTVPSEHGGAGMDAVAAVIVHHELAKSDPGFTLAYLAHAMLFVNNFFHA------G 112

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                  + PK+ S E+                +G+TE   GTD+  + +  ++  D   
Sbjct: 113 NDEQRARYLPKVLSGEW-------------IGAMGMTEPTSGTDVLGMKTFARRDGDRYI 159

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                    ++P +  F++ A +EGR     V   + +    G        K+G R +  
Sbjct: 160 LKGRKALITNAPEAQIFLVYATIEGR-----VTTFVVERGFPGFSTDEKTPKMGMRGSTM 214

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            EL F +        L    G + +M     L  L  A MS+      L   I YA  R 
Sbjct: 215 SELLFDDCVVPAWNVLGQEGGGIRNMMRNLELERLTLAAMSLGIADRCLEIMIQYAGERR 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +   ++R IA+      AA AL + +A +    +         R+     K +
Sbjct: 275 SFGKPIAEHGQIQRYIAESYAKTEAARALIYAVARNVSPERRN-------RLGTDAAKLF 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +   V   AM+ +GG GY  E  + R +R++    I  G+  +   ++   L
Sbjct: 328 AAPVGKEVADNAMQVLGGWGYCTEYKVERFFRDAKLLEIGGGTLESHQKNITREL 382


>gi|71003177|ref|XP_756269.1| hypothetical protein UM00122.1 [Ustilago maydis 521]
 gi|46096274|gb|EAK81507.1| hypothetical protein UM00122.1 [Ustilago maydis 521]
          Length = 649

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 118/548 (21%), Positives = 206/548 (37%), Gaps = 71/548 (12%)

Query: 36  AYSSDSLLV-ALIANFPSVVHK----ELELLGEYVLSCTAQELARMAN--------YNTP 82
            +SSD  L   ++  F S  H     E++ L + +     +     A+         + P
Sbjct: 17  PWSSDPALRLTILRLFSSGRHALRTAEIQRLFDKLTDYANKVQGEYADIAATLDTQQHEP 76

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY- 141
            L  Y   G+R DK+     W  L   +  D +    + R        +A   + ARL+ 
Sbjct: 77  TLVQYDAWGQRVDKLVTGEGWKRLKGVAAQDAIVAESYSRPEATSGGGRARLGQHARLFA 136

Query: 142 -----LMAQLEAGHLMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                + A +    L   S+T     ++ L  T +  ++  P++ S +           T
Sbjct: 137 FTRSVMFAPVSKVVLCPVSMTDGAVRVLELFGTEKQKRENIPRLCSTDPI---------T 187

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           +   G  +TE+ GG+D++   +  +         +   + +SG KWF S+   D  + LA
Sbjct: 188 AWTAGQWMTERPGGSDVSRTETVARPVNAHKKPEAGDQFVISGFKWFSSATDGDIALALA 247

Query: 248 QVEGRV--GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +    +  G   +   L        G  NG+   RLK K+G +   T ELE     G L+
Sbjct: 248 RTNDDLQLGSRGLSLFLIKIRDDKTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGELV 307

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-SGGILIDQPVMKRA 358
           G++      +  +  +  L SA  +V  +   L  A  YA+ R    GG L   P+    
Sbjct: 308 GEIGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLEKLPLHTDQ 367

Query: 359 IADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  + +       + F    L  + +  ++   +    R++ P  K +    A       
Sbjct: 368 LLKVTVTYRVFLQIFFSNVLLMGASESGQASKRDQTRLRLLTPALKAFIATRASESYLTL 427

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLF---- 469
           +E  GG GY+EE  +A   R+     I  G+   + LDVL +L   KG  L E       
Sbjct: 428 IESFGGQGYMEEVGMAEMLRDCTVERIWEGTPAILSLDVLRVLVQSKGQALVEFFQDIGN 487

Query: 470 ------STLEQDLGSSGKKVITILRDSISLC----------KEDKGLARFLTEKIALASS 513
                 S L QDL +    +  ++R + S+             D   +R+L + I     
Sbjct: 488 ILASLPSKLSQDLSAEISFLGNVVRRTASILTNLDLERHMKSTDLRFSRYLLDLIMAIQG 547

Query: 514 AAALYRAG 521
           +A L +  
Sbjct: 548 SALLLQHA 555


>gi|294139583|ref|YP_003555561.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12]
 gi|293326052|dbj|BAJ00783.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12]
          Length = 391

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 130/371 (35%), Gaps = 41/371 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +    +   ++ + A  +  +       +   S      +
Sbjct: 52  REIMNELGELGLLGATLPEKYACSNINYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + PK+   E+                 GLTE   G+D   + ++ ++I 
Sbjct: 112 YAYGTEAQRLKYLPKLAKGEW-------------IGCFGLTEPDVGSDPGGMRTRAERID 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D FI+  ++EG++  F++     +    GL   +++ K   R
Sbjct: 159 GGYRLNGAKMWITNSPIADVFIVWGKLEGKIRGFIL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+   N       LL ++    GP         L+ A   ++   +  AE   +A
Sbjct: 214 ASITGEIVMDNVEVPESALLPNVEGLKGP------FGCLNKARYGIAWGALGAAEFCWHA 267

Query: 340 RR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R     R      L    ++++ +AD+  +I        +     D+        A   
Sbjct: 268 ARQYTLDRIQFNRPLAANQLIQKKLADMQTEITLGLFTCLQAGRLMDQ-------DALPV 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 321 EAISLIKRNSCGKALDIARMARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHDIHAL-I 379

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 380 LGRAQTGIQAF 390


>gi|311109844|ref|YP_003982695.1| acyl-CoA dehydrogenase, N-terminal domain-containing protein 25
           [Achromobacter xylosoxidans A8]
 gi|310764533|gb|ADP19980.1| acyl-CoA dehydrogenase, N-terminal domain protein 25 [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 139/380 (36%), Gaps = 31/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYLMAQ 145
            P  + W+  E  PA H L ++    G         +  +    ++ + A  A  Y+ AQ
Sbjct: 22  DPFADEWEAAEIFPA-HELFKKMGDLGFLGITKPTEYGGMGLDFSYGVAAGEAMGYVRAQ 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             +      +  +   +A   +  + +++              AP     V + +G++E+
Sbjct: 81  GVSMGAGVQTDMATPALATFGSDALKREFL-------------APAIAGDVVVSIGVSEQ 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-----QVEGRVGCFLVPR 260
             G+D+A++ ++ ++  D         W  +   +D   +L      Q        +VP 
Sbjct: 128 GAGSDVASLKTRARRDGDDYVISGSKMWITNGTQADWICLLCNTSEGQTHKNKSMIIVPL 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLD 319
                   G+  Q++K K G   + T ++ F      +   +     G +  MK      
Sbjct: 188 REGGKRVKGVEVQKIK-KFGMWCSDTAQIFFDEVRVPVRNRIGEEGMGFIYQMKQFQEER 246

Query: 320 SAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               +     V L  E   Y R+R   G  L+D   ++  +A++  ++ A   L +    
Sbjct: 247 LGAAARRLAAVQLIEETADYLRQRVAFGKPLLDNQFIQFKLAELKTELEALRGLVYMATQ 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++       E       +A + K    +++  +    M+  GG GY  +  ++R YR+  
Sbjct: 307 TYINGGDVVE-------LASMAKLKAGRLSREIADWCMQFQGGMGYTWDNFVSRAYRDFR 359

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             SI  G+   M+  +   +
Sbjct: 360 LGSIGGGADEVMMQVIAKQM 379


>gi|221213070|ref|ZP_03586046.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
 gi|221167283|gb|EED99753.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1]
          Length = 384

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 127/383 (33%), Gaps = 32/383 (8%)

Query: 84  LHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAAR 139
           L  + P     + D+ + +P            G     +           K    +    
Sbjct: 24  LERHLPWERVRKMDEAKEYPH--EAHAALAEAGFLGLFYPEELGGSGGTYKDITVLLETL 81

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            Y    + A  + + +V +   VA   +  + ++  PKI S                 + 
Sbjct: 82  GYYYTGI-AQGITTTAVYAGMHVAKFGSDALKQEIIPKIISG-------------KAKLS 127

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLV 258
           L ++E   G+D+A I +   +  D         W   + ++D  +++A+ +        +
Sbjct: 128 LAMSEPGTGSDVAGIRTTAIRDGDEYVLNGSKVWITCAHVADYIVVIAKTDRDAPRHQGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             +L D    G+   R  N +G R+    E+ F N       L G    +   +     L
Sbjct: 188 STILVDAKAPGVTI-RPLNMLGRRTTHANEVFFDNVRVPASNLFGGEGQAWKNIMKCLGL 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A +S          A  YA++R      +    V++  + ++A+    +    +R
Sbjct: 247 ERMALAAISAGHCFRITEYASDYAKQRIQFDQPISSFQVIQHKLVNMAIMAETSRQSVYR 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +A   D           A     I K  C +       E ++ +GG+GY  E  +   +R
Sbjct: 307 VAELLDGGNP-------AINETSIAKIVCTENNFRCADEGLQILGGAGYSMEYDMQMFFR 359

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           +S    I  GS       +   +
Sbjct: 360 DSRVGPIGGGSNEIQRNVLAKRM 382


>gi|296158826|ref|ZP_06841655.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295891031|gb|EFG70820.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 391

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 137/377 (36%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  ++W+   + P    LLR+    G        +F          +  A     +    
Sbjct: 37  PFADQWEMDGYVP--RELLRKMGEQGFLGIRQSEAFGGAAMNVLGTVVLAEELGRSTFGG 94

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++  +  ++  +     P   +   P + +                   + +TE  
Sbjct: 95  FAITVLVHTDMASPHLQHAGNPAQLERLMPDLVAG-------------RKIAAVAMTEAG 141

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG-RVGCFLVPRLLED 264
            G+D+A++ +  +   D  Y L+G K F+++ +  D + + A+  G       +   + +
Sbjct: 142 AGSDLASMRTTARLDGDH-YVLNGAKMFITNGVHGDVYFVAAKTGGPGRSHGGISMFIVE 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R  NK G  S+ T EL F         LLG+ N     +        +   
Sbjct: 201 KGMPGFSVARPLNKQGWLSSDTAELVFDECRVPVQNLLGEENKGFYSLVRNLQNERITLG 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     ++   + Y  +R   G  L ++  +++ +A +   + AA  L +  A    
Sbjct: 261 AQALGEASKAIEITLAYVTQRTAFGQTLWEKQAIRQKMAMLLSKVEAARQLLYNTAWRDA 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + ++   E +  + +       C ++   V+    +  GG GY+ E  I R  R++   S
Sbjct: 321 QGQTVVAEVSMIKAL-------CGELVNEVMYACQQFHGGFGYMREAPIERMVRDARVQS 373

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+ +V   +
Sbjct: 374 IGGGATEVMLEEVAKRM 390


>gi|194016567|ref|ZP_03055181.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194012040|gb|EDW21608.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 370

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 122/363 (33%), Gaps = 39/363 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASM 161
             LL      G        S++ +       I A      + A +     +  SV +  +
Sbjct: 38  RTLLGEMGRQGFLGIPIPASYQGLGADFTTYIIAIHELSKVSATIGVIVSVHTSVVTMPI 97

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + + P + S                     LTE + G+D ++I  + ++ 
Sbjct: 98  LA-FGTNEQKESYVPLLASG-------------QKLGAFCLTEPKAGSDASSIQLRAERA 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         +  S   ++ +++ A  +       +   + +    G    + + K+G 
Sbjct: 144 GDHYVLNGTKMFITSGGEAELYLVFAVTDPASAKKNISAFIVEKDTPGFTIGKDEKKMGL 203

Query: 282 RSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + TV L F +       LLG                 +  A  S+     +L EA+ Y
Sbjct: 204 HGSKTVTLHFDDVRIQKQQLLGAEGEGFHIAMSSLNAGRIGIAAQSLGIAEAALTEAVTY 263

Query: 339 ARRRHVSGGILIDQPV---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            ++           P        + D+A  + AA  L ++ A   +  +  ++EA+ A  
Sbjct: 264 LKQ----------HPAGLETTIRLGDLAAKLEAAKLLVYQAAFYKEANRPVTKEASMA-- 311

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  K A  +  EA+  +G  GY       R++R++    I  G+     L + 
Sbjct: 312 -----KLFASKTAVEISTEAIHLLGMDGYTNRYQAERYFRDAKVCEIYEGTSEIQRLVIC 366

Query: 456 NLL 458
             L
Sbjct: 367 KQL 369


>gi|332293462|ref|YP_004432071.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171548|gb|AEE20803.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 604

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/460 (16%), Positives = 158/460 (34%), Gaps = 38/460 (8%)

Query: 83  QLHAYGPGGERWDKVEFHP-AW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           +          W++ E    A+    +R +   GL        +  +       +     
Sbjct: 45  EFVDRDLWAH-WERFEKKDYAYTEETMRTAGELGLLGVAVPEEYGGLGMGFVSTMLVCDY 103

Query: 141 YLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
              A               +M + L       + + PK+ + E+                
Sbjct: 104 ISGATGSFSTAFGAHTGIGTMPITLYGNEAQKQKYVPKLATGEWFG-------------A 150

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
             LTE   G+D  +  ++     DG          W  ++   + FI+ A++E      +
Sbjct: 151 YCLTEPGAGSDANSGKTKAVLSEDGKSYKISGQKMWISNAGFCNLFIVFARIEDDK--NI 208

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL- 315
              ++E+   NG+     + K+G  S++T ++ F++T       L     G    M  L 
Sbjct: 209 TGFIVENDPSNGITLGDEEKKLGIHSSSTRQVFFNDTVVSAENMLSERGNGFKIAMNALN 268

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A   +   R  + EA+ YA+ R      +I+   +K+ IA +A ++    + S+
Sbjct: 269 VGRIKLAAACLDAQRRVVNEAVTYAKERVQFKTPIINFGAIKQKIATMATNVYVDESASY 328

Query: 375 RLANSFDEAKS-------RSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           R A + ++  +         +EA         I   I K    +       E ++  GG 
Sbjct: 329 RAAKNIEDRIAMRHAEGNTHQEAELKGVEEYAIECSILKVAVSEDVQNTTDEGIQVFGGM 388

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           G+  +  +   +R++    I  G+     +  + ++ K        F      +G     
Sbjct: 389 GFSADAPMESAWRDARIARIYEGTNEINRMLAVGMMVKKAMKGHVDFMGPATAVGEELMG 448

Query: 483 VITILR-DSISLCKEDKGLARFLTEKIALASSAAALYRAG 521
           + +    D      E+K L + L +K+ L  + +A  + G
Sbjct: 449 IPSFDTPDFSETLSEEKDLLKRL-KKVFLMVAGSAAKKYG 487


>gi|114656353|ref|XP_001142569.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 1 [Pan
           troglodytes]
          Length = 407

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 26/342 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + DE    +++             +  + A  V  + ++C G
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFG 380


>gi|326203134|ref|ZP_08193000.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325986780|gb|EGD47610.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 383

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 121/353 (34%), Gaps = 31/353 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+ +    G   +     +  +      +      +          L   +      +
Sbjct: 37  RELINKMAQKGYLAASLPEKYGGLALNPVDYGFFTEEIGKACASTRSILTVHTSLVGETI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                 +    W P              M K        L+E   G++   + +   K  
Sbjct: 97  LRWGNEQQKDYWLPL-------------MAKGEKLAAFALSEPDVGSNAKGVQTSYVKQG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D        KW     ++D FI++A  +G++  FLV R     S  G+    +K  +  +
Sbjct: 144 DKYILNGRKKWITLGGIADVFIVIASEQGKITAFLVER-----SFPGVSTSLIKGMLSGK 198

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++   E++  N        L    G   +  +   LD    S++   V +A+      + 
Sbjct: 199 ASYISEIQLDNVEVPEENVLGK-VGNAFEYVVATALDHGRYSIAWAGVGIAQEALDAMVT 257

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y+R R   G  L    +++  I D    I AA AL  R        + R +  + A +  
Sbjct: 258 YSRNRTQFGEKLRSFQLVRGMIGDAVTKIHAARALCIRA------GEMRQQRDSDAIVET 311

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            I KY+  K+A  V  +A++  GG+G      + R +RE+    I+ G+    
Sbjct: 312 TIAKYFTSKVAMEVANDAVQIHGGNGCCSGYPVERLFREARVLEIIEGTSQLQ 364


>gi|312199199|ref|YP_004019260.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311230535|gb|ADP83390.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 379

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 122/374 (32%), Gaps = 27/374 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              + W++    P       +    G+        +             A       L  
Sbjct: 27  AHYDEWEERGMPP--RDFYTKCGELGIMGLGIPEEYGGGGASYLFNAVVAEEAGRLGLGL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L      S               W P +                S+   L LTE   G
Sbjct: 85  GPLRIHCDISVPYFVDHANEEQKARWLPGL-------------ADGSLVCALALTEPGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+A +++  +   D  Y ++G K F++  + +D F+   + +       +  L+ D + 
Sbjct: 132 SDLAGLSASARLDGDE-YVVNGSKTFITGGLNADIFLTAVKTDPTQRHAGLSLLVIDATA 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+       KIG       E+ F +       LLG++      +        +  ++ +
Sbjct: 191 PGVSRGAPMKKIGLHIQEACEIFFDDVRVPAANLLGEVGQGFTYLTSHLPQERMSISVNA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            S     + + + Y   R   G  L      K  +AD A  + A  A+  R   + D  +
Sbjct: 251 QSSAASVVTQTVEYVNGRKAFGKTLSHFQNTKFVLADCATQVEAGWAMLDRALVALDAGE 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               +AA         K +  +M   V+   ++  GG GY+ E  +AR + ++    I  
Sbjct: 311 LTPTDAAK-------VKLFVTEMQGRVVDACLQLFGGYGYMTEYPVARAWADARVGRIYG 363

Query: 445 GSGNAMVLDVLNLL 458
           GS   M   +   L
Sbjct: 364 GSSEIMKTIIAKDL 377


>gi|319791031|ref|YP_004152671.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593494|gb|ADU34560.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 386

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 139/368 (37%), Gaps = 22/368 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P  + W+  E  PA H + ++  + G+       +F       ++         MA+ 
Sbjct: 22  INPHVDEWEAAEIFPA-HEVFKKLGNLGMLGLNKPEAFGGAGLDYSYA------MAMAEA 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +  +   M TP + +       S E      AP         +G++E  
Sbjct: 75  LGHVSCGGVPMAIGVQTDMCTPALARFG-----SDELRREFLAPAIAGDTVGCIGVSEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A + S  +K  D         W  +S  +D   ML              ++    
Sbjct: 130 AGSDVAGLKSHARKDGDDYLISGQKMWITNSLQADWMCMLVNTSDGPVHRNKSLVMVPMD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+   +   KIG  S+ T  + F N        +     G V  M+      L +A  
Sbjct: 190 SPGIEKAKKIRKIGMNSSDTGLIYFDNVRVPQRYRIGEEGQGFVYQMQQFQEERLWAAAS 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+  M   +A+ I +A++RH+ GG L DQ  ++  +A++  ++ A  AL++R  +   + 
Sbjct: 250 SLEPMEDCIAQTIEWAQQRHMFGGTLADQQWVQFKLAELKTEVEALRALTYRACDLHVQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   E       +A + K    ++   V    ++  GG G+  E  ++R YR+    SI 
Sbjct: 310 EDVLE-------LASMAKLKTGRLTRQVSDTCLQFWGGMGFTLENRVSRLYRDGRLGSIG 362

Query: 444 LGSGNAMV 451
            G+   M+
Sbjct: 363 GGADEVML 370


>gi|320007330|gb|ADW02180.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 404

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 142/390 (36%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLE 147
           P    WD  E  P    +++ +   GL+   ++   +         ++ A   L      
Sbjct: 29  PAAAEWDAREETP--WPVIQEAAKIGLYG--FESLADMYGDPSGLSLQIANEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G  +  +  + + +    TP    +W P+ +  E DP                ++E + 
Sbjct: 85  IGMALFGTSLAVAGIFASGTPDQLAEWVPQCYGDEDDP----------KVAAFCVSEPQA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D++A+ ++ +     D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVSAMATRARYDEARDEWVLAGQKAWITNGGIAEIHVVVASVDPTLGARGQAAFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN------------VSTGPVEDMK 313
              GL   R   K+G R++ T ++   +        L                G  +   
Sbjct: 195 GTRGLEAGRTVKKLGLRASHTADVFLDDVRVPGHCLLGGKEKLDRRLARAREGGTAKGQA 254

Query: 314 ILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +   +         ++   R +   A+ YA  R   G  +I+   +  A+ADI  +I A
Sbjct: 255 AMATFEVSRPTVGAQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L ++ A           + A+      ++K    ++A A   +A++ +GG+GY  E 
Sbjct: 315 VRLLIWQAAWMARN------DRAFDAGQGSMSKLRAGELAVAATEKAVQILGGAGYSREH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R YR++   +I  G+     L +   +
Sbjct: 369 PVERMYRDAKIYTIFEGTSEIQRLVISRAI 398


>gi|86160534|ref|YP_467319.1| acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777045|gb|ABC83882.1| Acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 580

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 156/489 (31%), Gaps = 54/489 (11%)

Query: 84  LHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLY 141
           L   G     WD+  E  P +   L+     GL   +       +        R    L 
Sbjct: 48  LGGRGADFRAWDRAGEMPPGFVQELK---DAGLFSLVVPEHHGGMGLGATAYARVIQELG 104

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A  + + S      + L  T      + P++ + E             +     
Sbjct: 105 RYDASVAVTVGAHSSIGMRGLLLFGTEEQRARFLPRLATGE-------------LIAAFC 151

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D A+I +   +  DG        W  +  ++D F + A+     G   +   
Sbjct: 152 LTEPGAGSDAASIKTTAVRDGDGWILNGEKLWITNGGIADFFTVFAKTSLE-GRGHITAF 210

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
           +      G+     ++K+G R+++T  +   +        L     G    MKIL     
Sbjct: 211 IVTRDMKGVSTGPHEDKMGIRASSTTTVVLEDVRVPAANVLGEEGKGFKVAMKILNAGRT 270

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                SV GM+  +  ++  A+ R   G  +    ++++ I  + +D  AA ++   +A 
Sbjct: 271 GLGGGSVGGMKRLIELSVAQAKERKQFGQPIASFGLVQQKIGQMVIDCYAAESVVNMVAG 330

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D     ++      + A I+K    +       EA++   GSGY+ E       R++ 
Sbjct: 331 LVDRGFEETQ------VEAAISKVLASESVWRTADEALQIAAGSGYMREMPYEMALRDTR 384

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
            N I  G+   + L +        N   Q  + + + +       I          K   
Sbjct: 385 INRIFEGTNEILRLFIA---LTAVNDLGQELADVAESMKGVLADPIKGFGVMSDYAKRRA 441

Query: 499 GLA---RF-----------LTEKIALASSAA---------ALYRAGMNDIADVFLENRFL 535
            LA   R            L E  A+   AA          L R G   +    L  R  
Sbjct: 442 ALATGLRRKKGKWTMLHPALAEDAAVFEGAATDLAIAADKLLRRYGKKIVGAQLLTKRLA 501

Query: 536 DNCHSTHCM 544
           D       +
Sbjct: 502 DAMIDLFTL 510


>gi|302864703|ref|YP_003833340.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315500997|ref|YP_004079884.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|302567562|gb|ADL43764.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315407616|gb|ADU05733.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 404

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 134/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E  P    +++ +   GL+   +  +        +  I +  L+       
Sbjct: 29  PAAAEWDAREETP--WPIIQEAAKVGLYGFEFLATCWADPTGLSLPIASEELF-WGDAGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  + + +    TP    +W P+ F     P                 +E   G
Sbjct: 86  GLSIFGTSLAVAAIYGAGTPEQLVEWVPQCFGDVDSP----------AVAAFCTSEPEAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ ++ ++       D         +  +  ++   ++ A +E  +G       +    
Sbjct: 136 SDVGSMRTRAVYDEATDEWVLNGQKAYATNGGIAGVHVVTASIEPELGSRGQAAFVVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   R   K+G R++ T ++   +                                 
Sbjct: 196 TPGLTATRKLRKLGLRASHTADVFLDDVRVPGRCLLGGKDALDERLARARSGQRASGQAA 255

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+            ++   R +   A+ YA+ R   G  +I    +  A+AD+ ++I AA
Sbjct: 256 MRTFELSRPTVGAQALGVARAAYEYALDYAKERVQFGRPIISNQAVAFALADMKMEIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R +      +  +           ++K    ++A +V  +A++ +GG+G++ +  
Sbjct: 316 RLLVWRASWMGRNNRPFTA------GEGSMSKLKAGEVAVSVTDKAVQLLGGAGFLRDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R YR++   +I  G+     L +   +
Sbjct: 370 VERWYRDAKIYTIFEGTSEIQRLVISRAI 398


>gi|218295425|ref|ZP_03496238.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218244057|gb|EED10583.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 514

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 109/502 (21%), Positives = 194/502 (38%), Gaps = 42/502 (8%)

Query: 33  GMNAYSSDSLLVALIANFPSVV-HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
           G N Y+ D  L A++  F   +  +EL   G  V     +    +   + P+L  +   G
Sbjct: 9   GENHYNLDPDLKAVLDAFAPGLPQEELSAFGRLVGEEVLEVAHHVDALSPPRLLMHDLDG 68

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+    PA  ALL +                P    +   +  A  YL+A      +
Sbjct: 69  NRIDRALLSPAERALLEKLR----------PMVRPAYEGRGWPLHYALGYLLADGGLYCI 118

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +   A  +           +AP+          K  +          +TE +GG+D+
Sbjct: 119 LTITHQVAYALH---------KYAPE------WSAVKRELLYGKAYGATWMTEVQGGSDL 163

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNG 269
            A  +  ++  +      G K+F S   ++D  ++ A+ EG   G   +   L      G
Sbjct: 164 GANRTLARREGEAYRLYHGDKYFASGAGLADYALVTARPEGAPEGPKGLALFLLPREVEG 223

Query: 270 ---LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 +R K K+  R+  + E+E   +  +LLG          +   +  L +A+ ++ 
Sbjct: 224 RLNFRVRRFKEKLATRAVPSGEVELEGSLAYLLGRPEEGIYYTLETLTVARLANAVAAMG 283

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----E 382
             + +  E +   RRR   G  L+D  +++  + ++ L   A TAL+F     FD    E
Sbjct: 284 LAKKAHLEVLFRVRRRTAFGRRLLDHDLVQHDLLEMRLRQVAGTALAFLAVARFDQVWEE 343

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S+    AR+++ + K    + A  +   AME  GG G++E+  +AR +RE+    I
Sbjct: 344 RPPYSQAYHLARLLSHLAKGRTAEHAAQITGLAMELFGGLGFLEDYGVARFHREALITPI 403

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-DKGLA 501
             G  N   LD+L  + K     E L   L+          +     ++ L +E     A
Sbjct: 404 WEGPANIQALDMLEAVAK-KRAHEPLLEMLK-----GTPLALKAAEGALGLLREGGAWQA 457

Query: 502 RFLTEKIALASSAAALYRAGMN 523
           +    ++A A S  AL   G  
Sbjct: 458 KEALRRLADAVSVHALEAMGEP 479


>gi|194375079|dbj|BAG62652.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 105/279 (37%), Gaps = 21/279 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P I +       K    M +  +     +TE   G+D+A I ++ +K  D         
Sbjct: 45  MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 104

Query: 233 WFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 105 WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 164

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     K+ +          A  +V   + +L EA  YA  R 
Sbjct: 165 VFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERK 221

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 222 TFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKAF 274

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +A  +  +A++ +GG+G+  E  + +  R++    +
Sbjct: 275 AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQV 313


>gi|149927378|ref|ZP_01915633.1| acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149823870|gb|EDM83095.1| acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 387

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 137/376 (36%), Gaps = 33/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W+K  + P    L+      G+        F         ++    L    +L  
Sbjct: 32  PHYDQWEKEGWMPKETWLM--LGAAGMLGPDMPEEFGAAGAP--FEVALMILEETCRLNL 87

Query: 149 GHLMSPSVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             L +     A++    +  + T      W P++ + E             +   +G+TE
Sbjct: 88  HSLSTALNVHANIVMPYINNLGTAEQKAQWLPRMVTGE-------------IVGSIGMTE 134

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLE 263
              G+D+A + +   +  D  + ++G K F+++ +    I+LA + +   G   +   L 
Sbjct: 135 PGAGSDLAGMRTNAVRDGDE-WVINGSKTFITNGLHCGLIVLAAKTDTSKGAKGISLFLV 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D S  G    +   K+G  SN T EL F N       LLG+ N     +        L  
Sbjct: 194 DSSLPGFKKGKGIKKMGQHSNDTAELFFDNLRVPANALLGEENKGFIYLMQELPRERLGL 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              +V     ++A    Y  +R   G  +      +  +A++   +    A         
Sbjct: 254 GSQAVGACEGAMAITADYVTQRKAFGSTIAQFQNTRFKMAELRAQLELTKAY-------L 306

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + ++R +  A     A I K    ++   +  E ++  GG GY EE  I+R + ++   
Sbjct: 307 KQCEARFKLGAMTTEEASILKLMSTELQVKLTHECLQLFGGYGYTEEYPISRFFTDARVQ 366

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   M   +  
Sbjct: 367 TIYAGTSEIMKEVIAR 382


>gi|127511833|ref|YP_001093030.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126637128|gb|ABO22771.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 391

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 130/369 (35%), Gaps = 37/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +    ++        ++ + A  +  +       +   S      +
Sbjct: 52  REIMNELGELGLLGATLPEAYGCANANYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                 +  + + PK+ + E+                 GLTE   G+D   + ++ ++I 
Sbjct: 112 YAYGNEQQRQKYLPKLATGEW-------------VGCFGLTEPDVGSDPGGMKTRAERID 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+++G +  F++     +    GL   +++ K   R
Sbjct: 159 GGYRLNGAKMWITNSPIADVFVVWAKLDGVIRGFIL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ T E+   N               VE +K     L+ A   ++   +  AE   +A R
Sbjct: 214 ASITGEIVMDNVEV----GEEALLPNVEGLKGPFGCLNKARYGIAWGALGAAEFCWHAAR 269

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    ++++ +AD+  +I        +     D+        A     
Sbjct: 270 QYSLDRIQFNRPLAATQLIQKKLADMQTEITTGLFACLQAGRLMDQ-------DALPVEA 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   + +  GG+G  +E  + RH     A +   G+ +   L +L 
Sbjct: 323 ISLIKRNSCGKALEIARTSRDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHDIHAL-ILG 381

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 382 RAQTGIQAF 390


>gi|116053168|ref|YP_793489.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313110055|ref|ZP_07795958.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|115588389|gb|ABJ14404.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310882460|gb|EFQ41054.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 600

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/455 (16%), Positives = 161/455 (35%), Gaps = 64/455 (14%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A + +      ++ +A+
Sbjct: 76  PEVKPAVDAFLDAGFLNATRSFEQGGMQLPTLLSQACFAHFQAANVGSSAYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +               PM +      + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGSEEQKQRFL-------------QPMIEGRFFGTMALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y + G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AADGSYRIKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNADGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GPRNDVILAGLFHKMGYRGTTSTALNFGDNGACVGYLVGKPHHGLAYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R       G         +I    ++R +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+       + R +      ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDSQTLEDDEQRRQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             E  + ++YR++  N I  G+     LD+L                + Q+ G+  +++ 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG-------------RKVGQNNGAGLRQLT 469

Query: 485 TILRDSISLCKEDKGLA--RFLTEKIALASSAAAL 517
            +++D+    +    LA  R   E++    S   L
Sbjct: 470 RLIQDACRRAEAHPSLAALRQPLERLVARLSEVTL 504


>gi|119383466|ref|YP_914522.1| butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
 gi|119373233|gb|ABL68826.1| Butyryl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 384

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 118/363 (32%), Gaps = 18/363 (4%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E     H  L      G+  +     +          +RA  +   A       ++    
Sbjct: 36  ETSAFVHDQLAVLGEAGMLGANLPEEYGGSGISAPALLRAVAIVAGACGSTASALTAHYL 95

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++  + L  T    ++W PK  + E                   LTE   G+D A + ++
Sbjct: 96  ASDSILLGGTEAQKQEWLPKAAAGE-------------ALGAFALTEPTAGSDPADMKTR 142

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++   G +      +  +  ++D  ++ A  +       +   +      GL     + 
Sbjct: 143 ARRTDGGWHLKGAKCFISNGGVADFIVVYAVTDPDKAHRGISAFILPKGTPGLEPGAPEK 202

Query: 278 KIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            +G +      L          LLG+          +     ++ A   +     ++  A
Sbjct: 203 TMGLKGGHVFTLNLDCHLPEDALLGEEGRGFRTAMQVLDNGRIEVAAQCLGLAEAAMKSA 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YAR R + G  L D+  ++  IAD+ +    A  LS   A     A       + A  
Sbjct: 263 IAYARDRVIGGERLTDRQGIRWMIADMGVAFRQALLLSQDAARQRQAAHHGGGRFSLASS 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           MA +      + A  +   A++  GG GY  +  I R  R+     I  GS     + + 
Sbjct: 323 MAKLA---ASEAAGRIADTALQLHGGYGYTRDFPIERIARDLRIMRIYEGSSEIQRIIIS 379

Query: 456 NLL 458
             +
Sbjct: 380 GNM 382


>gi|294084491|ref|YP_003551249.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664064|gb|ADE39165.1| acyl-CoA dehydrogenase domain protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 389

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/290 (21%), Positives = 115/290 (39%), Gaps = 23/290 (7%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E   T   P  +      +  TE   G+D A+I ++  +  D  + L+G K F+S    S
Sbjct: 105 EQIETYLLPTVRGERTCSVAFTEPAAGSDAASIKTRAVRDGDD-WILNGAKHFISDGLYS 163

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297
           D F++ A  +   G   +   + +   +G    R +  +G R  + VE+ F +       
Sbjct: 164 DFFVVTAVTDPDAGYNGISTFIVEKGMSGFNVGRDQPMMGLRGTSHVEMSFDDVRLSQAH 223

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMS-VSGMRVS-----LAEAIHYARRRHVSGGILID 351
           LLG              L  L    ++ V+          +   + +AR R   G  +  
Sbjct: 224 LLGPEGKGLK-----MALSTLGRVRLAQVAARATGKATHIMDLMLEHARERKQFGAQIGT 278

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD A+DI A     ++ A+  D  +      +  ++ A        +M   V
Sbjct: 279 FQMVQQMLADSAMDINATRLALWQTASRIDNGEDPRANISMLKVQAA-------EMLGHV 331

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  A++  GG GY  +  I R+YR++    I  G+     + +   L KG
Sbjct: 332 VDRAVQIFGGMGYCRDLPIERYYRDARIYRIYDGASEIHRVVMAKSLMKG 381


>gi|148908850|gb|ABR17530.1| unknown [Picea sitchensis]
          Length = 227

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 96/230 (41%), Gaps = 10/230 (4%)

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  + P+++  I+ A+ +   G   +   + +    G    +  +K+G R + T EL F
Sbjct: 1   MWCTNGPVAETLIIYAKTDPNAGSKGITTFIIEKGMEGFSTAQKLDKLGMRGSDTCELVF 60

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGI 348
            N F      L      V  +   + L+  ++S   +  M+ S+   + Y R+R   G  
Sbjct: 61  ENCFVPEENILGKEGKGVYVLMSGLDLERLVLSAGPIGLMQASMDVVLPYVRQREQFGRP 120

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + +  +++  +AD+   + ++ A  + +A   D  +   ++             +  + A
Sbjct: 121 IGEFQLIQGKLADMYTALQSSRAFVYSVAKKCDNGEVDKKD-------CAGVILFAAENA 173

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  +A++C+GG+GY+ E    R  R++    I  G+     + +   L
Sbjct: 174 TQVALQAIQCLGGNGYVNEYPTGRLLRDAKLFEIGAGTSEIRRMLIGRAL 223


>gi|157694121|ref|YP_001488583.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
 gi|157682879|gb|ABV64023.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
          Length = 370

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 122/363 (33%), Gaps = 39/363 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASM 161
             LL      G        S++ +       I A      + A +     +  SV +  +
Sbjct: 38  RTLLAEMGRQGFLGIPIPSSYQGLGADFTTYIIAIHELSKVSATIGVIVSVHTSVVTMPI 97

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +A   T    + + P++ S                     LTE + G+D ++I  + ++ 
Sbjct: 98  LA-FGTNEQKESYVPQLASG-------------QKLGAFCLTEPKAGSDASSIQLRAERT 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         +  S   ++ +++ A  +       +   + +    G    + + K+G 
Sbjct: 144 EDHYVLNGTKMFITSGGEAELYLVFAVTDPASTKKNISAFIVEKGTPGFTIGKDEKKMGL 203

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + TV L F         LLG                 +  A  S+     +L EA+ Y
Sbjct: 204 HGSKTVTLHFDGVRIPKQQLLGAEGEGFHIAMSSLNAGRIGIAAQSLGIAEAALTEAVTY 263

Query: 339 ARRRHVSGGILIDQPV---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            ++           P        + D+A  + AA  L ++ A   +  +  ++EA+ A  
Sbjct: 264 LKQ----------HPAGLETTIRLGDLAAKLEAAKLLVYQAAAYKEANRPVTKEASMA-- 311

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  K A  +  EA+  +G  GY       R++R++    I  G+     L + 
Sbjct: 312 -----KLFASKTAVEISTEAIHLLGMDGYTNRYQAQRYFRDAKVCEIYEGTSEIQRLVIC 366

Query: 456 NLL 458
             L
Sbjct: 367 KQL 369


>gi|91783042|ref|YP_558248.1| putative acyl-CoA dehydrogenase, long- chain specific [Burkholderia
           xenovorans LB400]
 gi|91686996|gb|ABE30196.1| Putative acyl-CoA dehydrogenase, long- chain specific [Burkholderia
           xenovorans LB400]
          Length = 391

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 137/377 (36%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P  ++W+   + P    LLR+    G        +F          +  A     +    
Sbjct: 37  PFADQWEINGYVP--RELLRKMGEQGFLGIRQSEAFGGAAMNVLGTVVLAEELGRSTFGG 94

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  ++  +  ++  +     P   +   P + +                   + +TE  
Sbjct: 95  FAITVLVHTDMASPHLQHAGNPAQLERLMPDLVAG-------------RKIAAVAMTEAG 141

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG-RVGCFLVPRLLED 264
            G+D+A++ +  +   D  Y L+G K F+++ +  D + + A+  G       +   + +
Sbjct: 142 AGSDLASMRTTARLDGDH-YVLNGAKMFITNGVHGDIYFVAAKTGGPGRSHGGISMFIVE 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R  +K G  S+ T EL F         LLG+ N     +        +   
Sbjct: 201 KGMPGFSVARPLSKQGWLSSDTAELVFDECRVPVQNLLGEENKGFYSLVRNLQNERITLG 260

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     ++   + Y  +R   G  L ++  +++ +A +   + AA  L +  A    
Sbjct: 261 AQALGEASRAIEITLDYVTQRTAFGQTLWEKQAIRQKMAMLLAKVEAARQLLYNTAWRDA 320

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + ++   E +  + +       C ++   V+    +  GG GY+ E  I R  R++   S
Sbjct: 321 QGQTVVAEVSMIKAL-------CGELVNEVMYACQQFHGGFGYMREAPIERMVRDARVQS 373

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M+ +V   +
Sbjct: 374 IGGGATEVMLEEVAKRM 390


>gi|294010131|ref|YP_003543591.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292673461|dbj|BAI94979.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 599

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 177/531 (33%), Gaps = 65/531 (12%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
             F          + +      A +     N    +   Y   G    KV   P      
Sbjct: 31  ERFADHDRATFSTMIDTA-EKIATDWFANHNAKGDKHEPYMEDG----KVVLIPEIAKAY 85

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                 G   +  D  +  +             +L A +        +  +A+++    T
Sbjct: 86  GAFRDAGFLATTNDAQYGGLQLPFVIDRACIAYFLAANIATSGYAFLTCAAANLLLAHGT 145

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     +A              PM        + ++E + G+ +  I ++ +   DG Y 
Sbjct: 146 PEQIDRFA-------------LPMLAGRFTGTMCMSEPQAGSSLGDIRTRAELQPDGSYR 192

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE-DGSP---NGLCY 272
           L G K ++S    +       ++LA+          +  F+VP+ +  DG+P   N +  
Sbjct: 193 LFGTKMWISGGDHELSETIVHLVLARTGPAEHGVRGLSLFIVPKHIVRDGNPAERNDVAL 252

Query: 273 QRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             L +K+GNR+     L   +            G+ +G+ N     +  M     +   +
Sbjct: 253 VGLNHKMGNRATTNCVLSLGDGQFAVDGQAGAVGYRIGEENRGLSYMFHMMNEARIVVGL 312

Query: 323 MSVSGMRVSLAEAIHYARRRHVS-------GGI--LIDQPVMKRAIADIALDIAAATALS 373
            +V         A+ YAR R          G    +I    +++ +      +    AL 
Sbjct: 313 GAVMLGYTGYLHAVQYARDRPQGRALTQKGGDPVAIIQHADVRQMLLTQKAYVEGGLALC 372

Query: 374 FRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             LA   D+  +  EE A        ++ PI K W  K        A++  GG+GY  + 
Sbjct: 373 LYLAKLLDDQSTGDEETARRAYLLLDLLTPIGKSWPAKWCLEANNLAIQVHGGAGYTHDF 432

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            + + YR++  N+I  G+     LD+L            L S ++    S+        +
Sbjct: 433 PVEQFYRDNRINAIHEGTHGIQALDLLGRKVLNGEAIAYLDSVIDDRCTSAAGSANPDTQ 492

Query: 489 DSISLCKEDKGLARFLTEKIA--------LASSAAALYRAGMNDIADVFLE 531
           +     +      + +TE ++        LA++   L   G   IA ++LE
Sbjct: 493 EWARRLRSAWQDIQRVTEGLSREQDVERRLANAGLYLDAFGHVIIAWIWLE 543


>gi|54023197|ref|YP_117439.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014705|dbj|BAD56075.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 387

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 125/371 (33%), Gaps = 25/371 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG    D     PA   L+RR     L        +  +      ++ A      A    
Sbjct: 29  PGAAERDASARFPA--DLVRRLADQDLMGISVPTEYGGLGLSTRAQLVAIEEVARADAAL 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +        + +  T        P + + E                G  LTE   G
Sbjct: 87  ASIYTAHYLGLEPILVGGTEEQRARRLPALAAGEQ-------------LAGFALTEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DIA++ +  ++ +DG +      +  ++  +D  ++ A+ +   G   +          
Sbjct: 134 SDIASMRTVARRAADGWHVSGAKTFISNAREADLVVLFAKTDPDAGFRGITAFAVPKGTP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y   ++K+G RS  T  +   +       ++G                 +D A M+ 
Sbjct: 194 GITYSEPQDKLGIRSAPTYTVYLDDVVLPHDAVIGTEGRGGNIALTALNRARIDVAAMAN 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                +      YA  R   G  + +   ++  +     ++ AA   +   A+  D  + 
Sbjct: 254 GIALRAWELGRRYAAERKQFGHPIAEFQAIQLLLGACDAELVAARVTADWAADVKDAGQD 313

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   R  A I+KY   +   A++   ++  GG+G++ E  I R YR+     I  G
Sbjct: 314 -------LRRAASISKYTATEACFAIVDRVVQIHGGAGFMRESEIERLYRDCRILRIFEG 366

Query: 446 SGNAMVLDVLN 456
           +    +L +  
Sbjct: 367 TSQIQLLTIAG 377


>gi|296170294|ref|ZP_06851885.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895017|gb|EFG74736.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 390

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 119/365 (32%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 45  DLRDQAKKMGLFGYAIPQRWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W   + S               V     LTE   G++ A + ++  +   
Sbjct: 105 GFGTDEQKSRWLESMASG-------------DVVASFALTEPGAGSNPAGLRTKAVRDEG 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+          +   L      G+       K+G  
Sbjct: 152 DWVISGQKRFITNAPVADLFVVFARTRPADEQGPGIAVFLVPAKAPGVEVGAKDAKMGQE 211

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 212 GAWTADVTFDDVRVEDGALIGGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  +    +++  IAD    + A  AL    A  +   + R            
Sbjct: 272 AATATQGGAPIGTFQLVQAMIADQQTGVLAGRALVRDAARLWVTGEDRRVA-------PS 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L + + L
Sbjct: 325 AAKLFCTEMAGNVADLAVQVHGGSGYMHGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNL 384

Query: 459 EKGTN 463
            K   
Sbjct: 385 VKAAQ 389


>gi|264679746|ref|YP_003279655.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262210261|gb|ACY34359.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 397

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 141/410 (34%), Gaps = 44/410 (10%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A   Y   +L        R + V+       + R     GL        +  
Sbjct: 19  EDERMIRDAAREYCQDKLKPRVQAMFRNESVDVS-----IFREMGELGLLGPTIPTQYGG 73

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ + A  +  +           S      +    T      + PK+ S E+  
Sbjct: 74  AGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLASGEF-- 131

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  ++ ++  K+  G        W  +SP++D F++
Sbjct: 132 -----------IGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVV 180

Query: 246 LAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGD 301
            A+ V        +   + +    GL    +  K+G R++ T E+   + F        D
Sbjct: 181 WAKEVSEDGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPD 240

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
           +    GP         L+SA   ++   +  AE   +  R     R   G  L    +++
Sbjct: 241 VRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQ 294

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I      + R+    DE ++  E       +  + K   C  +  +   A 
Sbjct: 295 KKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCGKSLDIARMAR 347

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F 
Sbjct: 348 DMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIAAFA 396


>gi|327404335|ref|YP_004345173.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327319843|gb|AEA44335.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 592

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 79/462 (17%), Positives = 155/462 (33%), Gaps = 45/462 (9%)

Query: 92  ERWDKVE--FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +R DK+E    P+   L+ ++   G+           +       + A          + 
Sbjct: 50  DRIDKMEEGLMPS---LIEKAGELGMLGLSVPEDLGGMGVDFKTSLLATERLGKGHSFSV 106

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + +      +           + PK+ S E+                  LTE   G+
Sbjct: 107 AYGAHTGIGTLPLLYYGNAEQKAKYIPKLASGEWK-------------AAYCLTEPSAGS 153

Query: 210 DIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           D  +  ++                 W  +   ++ F + A+++       +   L +   
Sbjct: 154 DANSGKTKAALSPDGKHYIINGQKMWITNGGFANFFTVFAKIDDDK---NLSAFLVEADS 210

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMS 324
            G+     + K+G + ++T ++ F+N    +   L     G    + IL    +  A   
Sbjct: 211 EGISLNPEEKKMGIKGSSTRQVFFNNVKVPVENMLSERENGFKIALNILNIGRIKLAAGV 270

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + G + ++ +++ YA  R   G ++     ++  IA+ A+    A +  +R   + D+A 
Sbjct: 271 LGGAKQTITDSVRYANEREQFGRMISKYGAIRYKIAEQAIRTYVAESAIYRAGQNIDDAI 330

Query: 385 SRSEEAAY------------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
                                     I K    +    V  E ++  GG GY  E S+ R
Sbjct: 331 QAFVAGGMEKGQATLKGIEQFAPECAILKVAGSECLDYVADEGVQIFGGMGYSAESSVER 390

Query: 433 HYRESPANSILLGSGNAMVL----DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            YR+S  N I  G+     L     VL    KG          +  +L S  +  +T L 
Sbjct: 391 GYRDSRINRIFEGTNEINRLLIVDMVLRRAMKGELDLMGPAMKVASELMSIPE--MTELG 448

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            S  L  + + LA F    + +A SA       M+   ++ +
Sbjct: 449 SS-PLAVQRQALAGFKKTILMVAGSAVQKLMQTMSKEQEILM 489


>gi|299533372|ref|ZP_07046754.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718578|gb|EFI59553.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 382

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 132/392 (33%), Gaps = 31/392 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A  +AR A           P  +  D+  F    H  +      G+        F   
Sbjct: 14  AVADAVARFAE------ETLAPVAQAMDEEAFSATRH--VPGLSALGVMGMNLPERFGGP 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  + +      A      ++         V +       + W P+  S E+    
Sbjct: 66  GVTPTAMLMSLVAISRACAATSSMIGAHYLGTDAVLIGGDEAQREQWLPRCASGEW---- 121

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE RGG+  A + ++  +  D         +  ++  +   ++ A
Sbjct: 122 ---------LAAFALTEPRGGSHPADMRTRAVRDGDDYLITGVKHFISNAAEARFMVVFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
           + +       V   +      G+     +  +G R     E+   +        L    +
Sbjct: 173 KTDAEAAARGVSAFIVPRDLPGIQISSPEKLMGIRGGHAFEVSLDSVRVPAANRLGAEGS 232

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK+L    LD A  S+     +L  A  +A +R V G  + ++  ++  +AD+ L
Sbjct: 233 GFKTAMKVLDNSRLDVAATSLGIAEAALKAAADWANQRLVGGEPIANKQGIQFKLADMKL 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA AL+ +      + +  ++++A A       K +  +M   V  EA++  GG GY
Sbjct: 293 RLEAAWALTMQALALRQQGQPFTQQSAMA-------KLFASEMVGFVTDEALQIHGGYGY 345

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             E  + R+ R++    I  GS       +  
Sbjct: 346 TREMPLERYVRDARILRIYEGSSEIQRTIIAR 377


>gi|222081823|ref|YP_002541188.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221726502|gb|ACM29591.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 393

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 125/357 (35%), Gaps = 33/357 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        A+ + A  +  +       +   S      +    
Sbjct: 56  REMGELGLLGPTIAPEYGGAGLGYVAYGLIAREVERVDSGYRSMMSVQSSLVMVPIDAFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ + E+                 GLTE   G+D  ++ ++ +K+  G  
Sbjct: 116 SEAQKQKYLPKLATGEW-------------IGCFGLTEPNHGSDPGSMATRAKKVDGGYS 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++  + E  V    +   + +    GL    +  K+G R++ T
Sbjct: 163 LTGAKTWISNAPIADVFVVWGKTEDGV----IRGFILEKGWKGLSAPAIHGKVGLRASIT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            E+   N F     + N+             L+SA   ++   +  AE     A  Y   
Sbjct: 219 GEVVMENVFVP---EENLLPNVSGLKGPFTCLNSARFGIAWGALGAAEDCYAKARQYVLD 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    ++     E       +  I K
Sbjct: 276 RQQFGRPLAANQLIQKKLADMVTEITLGLQGCLRLGRMKEDGHPPVE-------LTSILK 328

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              C  A  +   A + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 329 RNSCGKALDIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALILGRAI 385


>gi|296810944|ref|XP_002845810.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238843198|gb|EEQ32860.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 619

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 118/579 (20%), Positives = 215/579 (37%), Gaps = 83/579 (14%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    +       D +L  +++       P  + ++L    + VLS T  E 
Sbjct: 4   SSSTEGFFQAQPSVEP-QIEEDGVLRRIVSLHLPSPLPQSMEQDLTRFSKLVLSRTTLEY 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W AL   +I +GL     + +      + 
Sbjct: 63  AAEAERNQPYLRPLTTFGVENKRDSLVTSEGWRALQDINIKEGLVGLSPEPTHTSHSIQW 122

Query: 132 AHKI-RAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPR---VHKDWAPKIFSREYDP 185
            +++ +  + +L     A      S+T  +AS+++         +  +   ++ SR+   
Sbjct: 123 NNRVFKGIKTHLWTPSSAMVTCPGSMTDGAASLLSKHLDDENGRIFAEALRRLVSRD--- 179

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK------ISD----------GIYCLS 229
                    +   G  +TE++GG+D+    +  +K        D          G + L 
Sbjct: 180 ------PAIAWTSGQWMTERKGGSDVRGTETVARKLTAQEMAEDNGVDSAGMPLGPWRLD 233

Query: 230 GHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-------RLLEDGSPNGLCYQRLKNKIGN 281
           G KWF S+  ++  IMLA+  E  +  F  P       +  E+   NG+  QRLKNK G 
Sbjct: 234 GFKWFSSATDANMSIMLAKTGENSISAFYAPLRRRAKGKDYEETELNGVRIQRLKNKFGT 293

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++  T ELE     G+L+G        +  +  +    ++I +VS    SLA    Y++ 
Sbjct: 294 KALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNSIAAVSYWGRSLAICRAYSKV 353

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSF-----------------RLANSFDEAK 384
           R  +G  L   P   R +A   +  AA+  L+F                   A      K
Sbjct: 354 RITNGRSLQATPSYVRTLAKDHVKYAASMHLAFFIVALLGISEGGSSASSMAAQVHIFPK 413

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYRESPAN 440
            +S   A  R++ P+ K      A   +  +ME +GG GY+E       +AR +R++   
Sbjct: 414 DKSHSLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPMLNVARIFRDTCVL 473

Query: 441 SILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS------ 492
           SI  G+   M  D++ ++  ++ ++    L   + + L  +  +   +   ++       
Sbjct: 474 SIWEGTTEVMADDLMRVVKGKQASDCLNALDKWVSRALSVARAQSFEVEAAALQQIWADF 533

Query: 493 -------LCKEDKGLARFLTEKIALASSAAALYRAGMND 524
                    +E     R   + +        L      D
Sbjct: 534 LSDAQSKDREELNWHGRRCLKVLERLVCGCLLILDASRD 572


>gi|256822431|ref|YP_003146394.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256795970|gb|ACV26626.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM
           16069]
          Length = 392

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/419 (19%), Positives = 151/419 (36%), Gaps = 44/419 (10%)

Query: 56  KELELLGEYVLSCT--AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
            ++ LL E +       ++ AR  +Y   +L        R +  +       ++      
Sbjct: 10  DDILLLDEQLTEEERMIRDAAR--DYCQERLMPRVLEANRHEIFD-----REIMTELGEL 62

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL  S  D          A+ + A  +  +       L   S      +    T    + 
Sbjct: 63  GLLGSTIDGYGCAGASYVAYGLVAREVERVDSGYRSALSVQSSLVMHPINAYGTEAQKEK 122

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + PK+ + E+                 GLTE   G+D A++ ++ +K+  G        W
Sbjct: 123 FLPKLATGEW-------------VGCFGLTEPDSGSDPASMKTRAKKVDGGYRLTGNKMW 169

Query: 234 FLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
             +SP++D FI+  + + G +  F++ + +E     GL   +++ K   R++ T E+   
Sbjct: 170 ITNSPIADVFIVWGKDDEGEIRGFILEKGME-----GLSAPKIEGKFALRASITGEIVMD 224

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGG 347
           N F           G          L+ A   +S   +  AE   +A R     R     
Sbjct: 225 NVFVPEENKFPEIKGLKGPFG---CLNVARYGISWGALGAAEFCWHAARQYGLDRKQFNK 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    + ++ +AD+  +I+     + R+    DE + + E       M  + K   C  
Sbjct: 282 PLASMQLFQKKLADMQTEISLGLQGALRVGRLIDEKRFKPE-------MISLVKRNSCGK 334

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           A  +   A +  GG+G  +E  + RH     A +   G+ +   L +L   + G   F 
Sbjct: 335 ALDIARMARDMHGGNGIADEFHVIRHAMNLEAVNTYEGTHDIHAL-ILGRAQTGLQAFM 392


>gi|209546572|ref|YP_002278490.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537816|gb|ACI57750.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 386

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 100/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CEGEQRERYLLPAVRGDKIDALAITEPDAGSDMRGMKCAARRNG-GDFVLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G   ++  + + +R      L F +
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEIRKGYDSVSHRGYHNSTLSFED 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R     A+ YA  R   G  + 
Sbjct: 220 CRIPEAQVLGEVHRGFDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGKPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D           A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAAEWLTLSAAWRLDAGLP-------ADRQIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|83952709|ref|ZP_00961439.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83835844|gb|EAP75143.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 387

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 124/369 (33%), Gaps = 40/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-- 161
             +  ++I  GL+ +                      +LM + E G        +     
Sbjct: 43  REVQSKAIEAGLYAANMPEEVGGAGLDT-------LTWLMYEKELGRANYALHWTCVARP 95

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +       E                 L +TE   G+D+  + +  +
Sbjct: 96  SNILLAGTEEQREKYLYPCIRGEKWD-------------CLAMTEPGAGSDLRGMKASAK 142

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQR 274
           +  D    L+G K F+S    +D  I+          R    L+     D    G   + 
Sbjct: 143 QDGDDF-ILNGTKHFISHADIADFSIVFMATGEEETPRGPKKLITAFFVDKGTPGFSVRE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               + +R      LEF N       +LG+++       D      L  A   +     +
Sbjct: 202 GYRNVSHRGYTNAVLEFDNCRLPKSAVLGEVHKGFQVANDWLGATRLQVAATCLGRAERA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A+ YA  R   G  +     +   +AD+A ++ AA  L++     FD+      + +
Sbjct: 262 LQHAVEYAAERRQFGQQIGKFQGVSFKLADMATELKAAELLTWMGGWKFDQGNVTESDMS 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A        +M   V  EA++  GG G ++E  + R +R++    I  G+     
Sbjct: 322 MAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQR 374

Query: 452 LDVLNLLEK 460
             +   + +
Sbjct: 375 HIISREMLR 383


>gi|154279652|ref|XP_001540639.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412582|gb|EDN07969.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 615

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 118/518 (22%), Positives = 203/518 (39%), Gaps = 84/518 (16%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           + S +     Q P  I    Y  D+    +I+ +     PS + ++L      VLS +  
Sbjct: 2   EASSATKGFFQTPPTIPP-QYVEDAAFRRIISLYLPSPIPSSIDEDLSRFSRLVLSRSHM 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
             A  A  N P L      G   + D +     W  L  R I +G+    +        R
Sbjct: 61  AYAADAEKNQPYLRPLSTFGTENKQDPLVTSEGWRKLQDRGIVEGMVGIAYAN-----AR 115

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 RA       Q    HL + S       AL+T P    D A K+  R  +  N +
Sbjct: 116 GSPWNNRA------YQFIKLHLWTSS------AALVTCPGAMTDGAAKLLGRHLNGANGS 163

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
              +            +   G  +TE++GG+D+    +  +K+S                
Sbjct: 164 IFTEARNRLISRNPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCP 223

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P  R +  G+      NG+  Q
Sbjct: 224 LGPWQLDGFKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVVGGAEDETELNGVRIQ 283

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 284 RLKNKLGTKALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLA 343

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRS 387
            +  YA+ R   G +L + P   RA+A   +       L+  +A+        D   +++
Sbjct: 344 ISRAYAKVRIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQA 403

Query: 388 EEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
            +A           A  R++ P+ K      +   +   ME +GG GY+E      ++AR
Sbjct: 404 TQASILPTNAEQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVAR 463

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQL 468
            +R+    SI  G+ + M  D++ +++  +G      +
Sbjct: 464 IFRDVCVLSIWEGTTDIMADDLVRVMKSRQGPATLAAV 501


>gi|221481451|gb|EEE19837.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
          Length = 356

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 135/365 (36%), Gaps = 33/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
            ++      G      +  +        + +               L+    T  +  + 
Sbjct: 10  EVIEGLFKQGYLGMEIEEKYGGSAMSFFNSLVVIEELARVDPSVAALVDIHNTLINRALT 69

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--I 221
           L  T    + + P++ S               +     L+E   G+D  A+ +  ++   
Sbjct: 70  LYGTEEQKEKFLPQLASN--------------MLGSFCLSESESGSDAFALKATARRSEN 115

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D        +W  ++  +  F++ A  +   G   +   L +    GL       K+G 
Sbjct: 116 GDAWVLNGAKQWISTAREAGLFLVFASYDLDQGYRGITAFLVEAGTAGLEVGPALEKLGI 175

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAE-----A 335
           ++++T E+  ++          V     E  KI I L +   + ++   + LA+     A
Sbjct: 176 KASSTCEVILNDVQVHDSC---VLGEVGEGYKIAIRLLNEGRIGIAAQMLGLAKGAFETA 232

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y   R   G  + D   ++   A +A +I AA  L+   A   +  +  ++EAA A  
Sbjct: 233 MRYMHDRQQFGRKIADFQGVQFEYAKLATEIEAAALLTANAALLREAGQPFAKEAAMA-- 290

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K+   ++A  V +  ++ +GG+G+ +   + + +R+S   +I  G+ N  +  + 
Sbjct: 291 -----KFKSSEVAQRVSSACIDFVGGNGFTKSFGLEKLFRDSKIGTIYEGTSNMQLQTIA 345

Query: 456 NLLEK 460
            +L++
Sbjct: 346 KVLQR 350


>gi|99082636|ref|YP_614790.1| butyryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99038916|gb|ABF65528.1| Butyryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 399

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 123/368 (33%), Gaps = 38/368 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-- 161
             L  ++I  GL+ +                      +LM + E G        +A    
Sbjct: 55  KELQSKAIEAGLYAANMPEEVGGAGLDT-------LSWLMYEKELGRANYALHWTAVARP 107

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +               P  +      L +TE   G+D+  +T+  +
Sbjct: 108 SNILLAGTDEQKEKYL-------------FPCIRGEKWDCLAMTEPGAGSDLRGMTASAR 154

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
           K  D         +   + ++D  I+          R     +     D    G   +  
Sbjct: 155 KEGDDWVLNGTKHFISHADIADFAIVFMATGEEDTPRGKKKKITAFFVDKGTPGFAVRDG 214

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              + +R      LEF +       +LG+++              L  A   +     +L
Sbjct: 215 YRNVSHRGYTNQVLEFDDCRLPSSAILGEVDQGFEVANTWLGATRLQVAATCLGRADRAL 274

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ YA +R   G  +     +   +AD+A+++ AA  L++     FD+      + + 
Sbjct: 275 QHAVEYAAQRKQFGQPISKFQGVSFKLADMAMELKAANLLTWEAGWKFDQGSVTEADMSM 334

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A++ A        +M   V  EA++  GG G ++E  + R +R++    I  G+      
Sbjct: 335 AKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQRH 387

Query: 453 DVLNLLEK 460
            +   + +
Sbjct: 388 IISREMLR 395


>gi|83859140|ref|ZP_00952661.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
 gi|83852587|gb|EAP90440.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633]
          Length = 395

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 130/361 (36%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +        A+ + A  +  +       +   S      +
Sbjct: 56  RNIMTEMGEMGLLGATVAEEYGGAGLSHVAYGLIAREVEAIDSGYRSAMSVQSSLVMYPI 115

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + PK+ S EY                 GLTE  GG+D  A+ +  +K  
Sbjct: 116 EAFGTEEQKHKYLPKLASGEY-------------VGCFGLTEPDGGSDPGAMRTTARKAD 162

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP+SD  ++ A+++G +  F+V     D    G    +++ K+  R
Sbjct: 163 GGYVLNGAKMWITNSPISDLAVVWAKLDGEIRGFIV-----DKGTEGFDCPKIEGKLSLR 217

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T  +  ++ F     + N+             L+ A   ++   +  AE     A  
Sbjct: 218 ASITGSISLNDAFVP---EENLLPHVKGLRGPFSCLNKARYGIAWGAMGAAEFCLHAARD 274

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R V G  +    ++++ +AD+  +IA     +  L    D+        A+     
Sbjct: 275 YAMERVVFGKPIAGTQLVQKKLADMQTEIALGYQGALALGRMLDQG-------AWIPEAI 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A A+  EA +  GG+G  EE  I RH       +   G+ +   L +   
Sbjct: 328 SMMKRNNCGKALAIAREARDIHGGNGIAEEYHILRHAINLETVNTYEGTHDVHALILGRA 387

Query: 458 L 458
           +
Sbjct: 388 M 388


>gi|307326307|ref|ZP_07605503.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887970|gb|EFN18960.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 379

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/373 (20%), Positives = 129/373 (34%), Gaps = 32/373 (8%)

Query: 93  RWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           R ++ E   ++ A L R     GL    +        +     ++               
Sbjct: 30  RVEEHERAESYPAGLFRLLGETGLLGLPYPEESGGGGQPYEVYLQVLEELAARWAAVAIA 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S    +A  +    T      WA  I S               +  G  L+E + G+D 
Sbjct: 90  TSVHTLAAFPLLTFGTSAQRGRWAEDILSG-------------RLIGGYSLSEPQAGSDA 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+T +  K  DG        W      +D + + A+     G   +      G  +GL 
Sbjct: 137 AALTCRADKAPDGYRITGAKAWITHGGKADFYALFART--GPGSDGISCFFAPGHTDGLT 194

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
           + R ++K+G  +  T    + +    LL    +     E ++I    LDS  + V+    
Sbjct: 195 FGRPEDKMGLHAIPTTSAFWDDA---LLATDRLIGAEGEGLQIAFSALDSGRLGVAACAT 251

Query: 331 SLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            LA+A   A       R   G  +ID   +   +AD+A  + +A A     A   D  + 
Sbjct: 252 GLAQAALDAATAYAHERTTFGRRIIDHQGLGFLLADMAAAVDSARATYVDAARRRDHGRP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + +       A + K      A  V  +A++  GG GY  +  + R+ RE+    I  G
Sbjct: 312 YTRQ-------ASVAKLTATDAAMKVTTDAVQVFGGYGYTRDFPVERYMREAKIMQIFEG 364

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 365 TNQIQRLIISRQL 377


>gi|221065703|ref|ZP_03541808.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220710726|gb|EED66094.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 397

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 142/410 (34%), Gaps = 44/410 (10%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A  +Y   +L        R + V+       + R     GL        +  
Sbjct: 19  EDERMIRDAARDYCQDKLKPRVQAMFRNESVDIS-----IFREMGELGLLGPTIPTQYGG 73

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ + A  +  +           S      +    T      + PK+ S E+  
Sbjct: 74  AGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGTEAQKMKYLPKLASGEF-- 131

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D  ++ ++  K+  G        W  +SP++D F++
Sbjct: 132 -----------IGCFGLTEPDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVV 180

Query: 246 LAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGD 301
            A+ V        +   + +    GL    +  K+G R++ T E+   + F        D
Sbjct: 181 WAKEVSEDGTVGQIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDDVFCPEENAFPD 240

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMK 356
           +    GP         L+SA   ++   +  AE   +  R     R   G  L    +++
Sbjct: 241 VRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFGRPLAANQLIQ 294

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I      + R+    DE ++  E       +  + K   C  +  +   A 
Sbjct: 295 KKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLIKRNNCGKSLDIARMAR 347

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           + +GG+G  +E  +ARH       +   G+ +   L +L   + G   F 
Sbjct: 348 DMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQTGIAAFA 396


>gi|146091267|ref|XP_001466486.1| isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5]
 gi|134070848|emb|CAM69207.1| putative isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5]
 gi|322500163|emb|CBZ35239.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 410

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 135/346 (39%), Gaps = 35/346 (10%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L           ++ S+   +      +P     W PK+ 
Sbjct: 88  PEADGGAGMDAVAAVIIHHELSKYDPGFCLAYLAHSMLFVNNFYYSASPAQRARWLPKVL 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  +    +K S+G Y L+G K ++++  
Sbjct: 148 TGEH-------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGNYVLNGSKIWITNGT 194

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D F++ A+V+G++  F V R        G       +K G R++   +L   +     
Sbjct: 195 VADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRASHMCQLFLEDVVVPA 249

Query: 299 LGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L      +  M     L  +  A M+V     S+     YA  R   G  + +   +
Sbjct: 250 ENLLGEEGKGMVGMMRNLELERVTLAAMAVGIAERSVELMTSYASERKAFGQPISNFGQI 309

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R IA+   D  AA AL + ++++          +  A       K +   +A  V   A
Sbjct: 310 QRYIAEGYADTEAAKALVYSVSHNVHPGNKNRLGSDAA-------KLFATPIAKKVADSA 362

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++ +GG GY +   + R +R++    I  G+  A   ++   L KG
Sbjct: 363 IQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAHHKNITKDLLKG 408


>gi|114656351|ref|XP_001142638.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 2 [Pan
           troglodytes]
          Length = 444

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 26/342 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           + DE    +++             +  + A  V  + ++C G
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFG 380


>gi|23098125|ref|NP_691591.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
 gi|22776350|dbj|BAC12626.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831]
          Length = 392

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 120/366 (32%), Gaps = 39/366 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ ++ + G         +      Q  +   A      ++    +      SA  +  
Sbjct: 49  ELVLKAKNAGFWGINTPEEYGGADLGQMMQAIVAM-----EVSKTFVPFQFGGSADNILY 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                   ++               P           +TE   G+D   I     K    
Sbjct: 104 YGNEEQKNEYLI-------------PTINGEKKSCFAMTEPGAGSDTQNIKMTAVKDGSE 150

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + L+G K F++    +D  +++A  +        G   V   + D            + 
Sbjct: 151 -WVLNGEKTFITGGNEADFVMVIAITDKELHQKTKGREGVTCFIADRDMGWES--EYIHT 207

Query: 279 IGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G    A+  L F N        LG+L+       +            +V      L  A
Sbjct: 208 MGEWGPAS--LFFENVRIPEKNILGELHKGYNLGLEWIGFARWIVGARAVGTAERLLQMA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y++ R   G  + ++  ++  IAD A+++ AA  L    A + D+ +         R 
Sbjct: 266 IDYSKERETFGKPISERQAIQWQIADSAVEVEAARWLVLNAAFTLDQGEDN-------RH 318

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A I K +   M   V+   M+  GG GY  E  I R YRE+    I  G+     L + 
Sbjct: 319 LASIAKLYGANMGTRVVDRVMQIHGGMGYTRELPIERWYREARLWRIYDGTDEIQRLIIS 378

Query: 456 NLLEKG 461
             L KG
Sbjct: 379 RNLLKG 384


>gi|154248630|ref|YP_001419588.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162715|gb|ABS69931.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 397

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 123/372 (33%), Gaps = 35/372 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
             ++      GL        +            AAR            MS  S      +
Sbjct: 55  REIMNEMGELGLLGPTIPAEYGGAGLGYVSYGLAAREVERVDSGYRSAMSVQSSLVMHPI 114

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ + E+                 GLTE   G+D A + ++ +KI 
Sbjct: 115 YAYGTEAQRQKYLPKLATGEW-------------IGCFGLTEPDAGSDPAGMRTRAEKID 161

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D  ++ A+         +   + +    G    +++ K+  R
Sbjct: 162 GGYRLNGAKMWITNSPIADLAVVWAKSAAHDNA--IRGFVVERGMKGFSTPKIEGKLSLR 219

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T E+   +     + + N+             L+ A   +    +  AEA       
Sbjct: 220 ASITGEIVLEDV---EIPEENLLPNVSGLAGPFGCLNRARYGIGWGAMGAAEACFAQARQ 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD+A DIA       R+   F+E +   E         
Sbjct: 277 YTLDRKQFGKPLAATQLVQKKLADMATDIAFGLQACLRVGRLFEEGRLPPE-------TI 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L    +
Sbjct: 330 SFIKRNNCGKALDIARTARDMHGGNGISAEFHVIRHAANLETVNTYEGTHDIHAL----I 385

Query: 458 LEKGTNLFEQLF 469
           L +G    +  F
Sbjct: 386 LGRGITGIQAFF 397


>gi|85710896|ref|ZP_01041957.1| Glutaryl-CoA dehydrogenase [Idiomarina baltica OS145]
 gi|85695300|gb|EAQ33237.1| Glutaryl-CoA dehydrogenase [Idiomarina baltica OS145]
          Length = 390

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 128/368 (34%), Gaps = 35/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +++     GL  +    ++        ++ + A  +  +       +   S      +
Sbjct: 52  REIMQELGQLGLLGATIPEAYGGAGVNHVSYGLIAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                 +  K + PK+ + E+                 GLTE   G+D A++ ++  K  
Sbjct: 112 YAFGNEQQRKKYLPKLATGEW-------------VGSFGLTEPDAGSDPASMRTKAIKTE 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+ +G +  F++ R        GL    ++ K   R
Sbjct: 159 AGYRITGSKMWITNSPIADVFVVWAKCDGDIVGFILER-----GMKGLSTPEIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++ T E+            L    G          L+ A   ++   +  AE   +A R 
Sbjct: 214 ASITGEIVMDEVEVSEEQRLPNVRGLK---GPFSCLNKARYGIAWGAMGAAEFCWHAARQ 270

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    ++++ +AD+  +I      + +     D                
Sbjct: 271 YTLDREQFGRPLAANQLIQKKLADMQTEIGLGLLAALQAGRELDRKTLNPAA-------I 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +  +A +  GG+G  +E  + RH     + +   G+ +   L +L  
Sbjct: 324 SLIKRNNCGKALDIARQARDMHGGNGISDEYHVIRHVMNLESVNTYEGTHDVHAL-ILGR 382

Query: 458 LEKGTNLF 465
            + G + F
Sbjct: 383 SQTGISAF 390


>gi|304311605|ref|YP_003811203.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301797338|emb|CBL45558.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 387

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 136/380 (35%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P     LR +   G+    +      V         A      A    
Sbjct: 25  PRAYDLDKEAQFPT-ELYLRMNREIGVCAIPFKEEHGGVGLGVLEMSLAIEELARADQTF 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +V +   +    +      + P+I +                   +  TE + G
Sbjct: 84  ALSVMVAVATGLTLQTFGSDMQKAKYLPEIVAG-------------RAVGSIAGTEPQAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-------IMLAQVEGRVGCFLVPRL 261
           +  A  T++  K +DG + ++G K F+++  +D         +  A  + +         
Sbjct: 131 SWTAGFTTRATKQTDGQWSITGEKAFITNSGADITAYNLICAVTSAPTDPKSKM---SLF 187

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      G+   +  +K+G RS+ T  +           ++G+       V         
Sbjct: 188 LVPAGTPGVTIGKSYDKLGWRSSDTHPIYLDGAKVGDEMMVGNEGDGRYIVHKTYQSARC 247

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             +  ++   +  L  +I YA+ R   G  L    ++++ IAD+A+ +  +  L+ + A 
Sbjct: 248 FLSACALGLSQACLDHSIAYAKDRQAFGRTLGGLQLVQKMIADMAVKVETSRLLARQAAM 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+  +   E A A       KY CC+M+  V   A++  GG G++ +  I+R+ R++ 
Sbjct: 308 KADQGTASILELAMA-------KYHCCEMSSEVADLALQVHGGFGFMNDCPISRYLRDTR 360

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS     + +   L
Sbjct: 361 ITRIGDGSSQIQTMIIAKEL 380


>gi|88706159|ref|ZP_01103866.1| Acyl-CoA dehydrogenase, short-chain specific [Congregibacter
           litoralis KT71]
 gi|88699553|gb|EAQ96665.1| Acyl-CoA dehydrogenase, short-chain specific [Congregibacter
           litoralis KT71]
          Length = 382

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 132/359 (36%), Gaps = 28/359 (7%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             A +++    G+  +  D  +          +          L+       +   A M+
Sbjct: 42  MQAWVKQFTDYGMIKAPHDEQWGGFGMDWLTHLMVFEEIAYTSLDLATPGFINCVGAEML 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           + + +  + + +   + +                 I LG++E   G+D+AA+ ++  +  
Sbjct: 102 SQLASAEMKEKYLADVLNC-------------DKFIALGISEPDVGSDVAAVKTRAVREG 148

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  +   SD  I   +     G   +  +L D   +G     +K K+   
Sbjct: 149 DHWVINGEKTWITNGEYSDLLICTCRT----GDNEISHILIDREEHGYDVMGIK-KLALN 203

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDS--AIMSVSGMRVSLAEAIHYA 339
             +T ++  S+    +   L     G    MK+  Y     A+  V+  R +L E+I Y+
Sbjct: 204 GQSTAQIFLSDVRVPVSNTLGEQGQGLKNTMKLFEYARCHMAMWGVATARRALDESIKYS 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +    ++   +A +A  + AA  L++R     +      +E         +
Sbjct: 264 QERSQHGKPIAGHQLIADKLATMATQVDAARLLAYRAITLVESGIRADKE-------CSM 316

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K++  ++A     +A++  GG+G  +E  + R  RE+  + I  G+     L +   L
Sbjct: 317 AKWYGTEIAVNATRDAVQIHGGNGVTKEFVVERLAREALISPIPDGTTEIQKLLIARCL 375


>gi|212532319|ref|XP_002146316.1| electron transport oxidoreductase, putative [Penicillium marneffei
           ATCC 18224]
 gi|210071680|gb|EEA25769.1| electron transport oxidoreductase, putative [Penicillium marneffei
           ATCC 18224]
          Length = 687

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/588 (19%), Positives = 214/588 (36%), Gaps = 66/588 (11%)

Query: 21  SLFALNQP--PLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           +    +QP  P  +  N Y  D     L+  +           EL  L E  +S      
Sbjct: 83  TTAFHSQPLRPGPVLQNPYHDDVAFARLLELYLPAEVKKRADSELNGLAEDAVSEKNMNW 142

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
                 N P++  +   G + D++     W  L R    + L       S        A 
Sbjct: 143 VADTERNPPRVEHWDSWGVKKDELVTSQGWKELWRWGKLERLAALP---SLTNEYEGYAR 199

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192
            I+  +++L +   A       ++      L +       D A +   +       +P  
Sbjct: 200 IIQVLKVHLFSPASATTNFHLILSDGVGTLLRSHLNDNKIDDATRALLQYSYDRLTSPEP 259

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQK----------ISDGI----YCLSGHKWFLSSP 238
           +     GL +TE+ GG+D+    +               +DG     + L+G KWF +S 
Sbjct: 260 EKGWTSGLWMTERAGGSDLTPTETTATYSPLGPDDKSTDADGFPLGPWVLNGLKWFSTST 319

Query: 239 MSDAFIMLAQVEGRVGCFLVP---RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEF 291
                I +A+    +  F VP    +  +G P    NG+  +RLKNK+G +   T ELE 
Sbjct: 320 EGSMAIAVARTPIGLSAFYVPMRRAVTVNGVPSVELNGVRIRRLKNKMGTKGLPTGELEL 379

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI 350
           S   G+L+G        +  +  +  +  A++SV      L+ A  +AR R V+ G  L 
Sbjct: 380 SGMRGYLIGKEGKGVNEIGVVLNITRIHLAMVSVGYAARGLSIARAFARVRKVARGTQLS 439

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------------SRSEEAAYARIMAP 398
             P+  + +A   +   A  AL   +A      +            +  +  A  R++  
Sbjct: 440 SVPLHMKTLAKAHVTYRAHLALCMFIAALLGRTEQPKASLNDFVPANAQDAGALLRLLGS 499

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIE----ERSIARHYRESPANSILLGSGNAMVLDV 454
           + K         V+  +ME +GG GY+E      ++AR  R+  A  I  G+ + +  DV
Sbjct: 500 VAKATATMDCVGVLQCSMESLGGVGYLENDEAGFNVARVLRDCTAILIGEGTTDVIATDV 559

Query: 455 LNLLEK--GTNLFEQLFSTLEQDL---------GSSGKKVITILRDSISLCKEDKGL--- 500
           + +L+   G+ + +     +E  L          +   +  + L+ +++     + +   
Sbjct: 560 VKVLKGPIGSYVVQAYSRWVEASLPKKESLAPEAAIITQQWSELQTALTSNS-IEYITMN 618

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGR 548
           AR + + +A  ++   L      D  D  +             +L G 
Sbjct: 619 AREIMQLVAKLTAGVLLLADAARD--DNAVAVEVAKRWIQPPTLLSGS 664


>gi|256393573|ref|YP_003115137.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359799|gb|ACU73296.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 387

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/413 (20%), Positives = 148/413 (35%), Gaps = 39/413 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
            P+   +E   L   V   T QE+        P L  +   GE             L ++
Sbjct: 6   GPAWSTEERRALRATVRRFTEQEV-------LPNLDGWERAGE---------LPRELSKK 49

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL                   I        A        S  + ++     ++TP 
Sbjct: 50  AGALGLLGVAHPVEVGGGGGDLIDAITVNEEMHDAG------GSGGLFASLFTCGISTPH 103

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +     P+   R   PT             L +TE  GG+D+A I +  ++  +     +
Sbjct: 104 LVAANDPEQIERWVKPTL-----AGEKIGALAVTEPGGGSDVARIQTTARRDGEHFVV-N 157

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           G K F++S +   +++ A   G  G   +  L+ +    G    R   K+G   + T EL
Sbjct: 158 GAKTFITSGVRADYVVAAVRTGDSGASGISLLVVEKDTPGFTVSRRLEKLGWLCSDTAEL 217

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +       L+G  N     + +  +   +  A  + S  +  L  A+ + R+R   G
Sbjct: 218 AFQDARVPVENLVGAENSGFFQLAEHFLSERVALAAQAYSHAQRCLDLAVDWTRKRQTFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCC 405
             LID+ +++  + ++A  I  A   +  L +      K    E  +A+  A  T  W  
Sbjct: 278 KPLIDRQLVQNTLTEMARKIDVARTYTHALIDRSLAGEKDLIAEVCFAKNTAVETAEW-- 335

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                V  +A++  GG GY+ E  + RHYR+     I  G+   M      +L
Sbjct: 336 -----VATQALQLFGGLGYMRESEVERHYRDVRILGIGGGATEVMNGLAARVL 383


>gi|149922645|ref|ZP_01911073.1| isovaleryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149816531|gb|EDM76028.1| isovaleryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 386

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/358 (19%), Positives = 122/358 (34%), Gaps = 29/358 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L RR    GL                 A  I    L           ++ S+   +   
Sbjct: 45  ELFRRLGELGLLGITVPIDDGGSGMDATAAVIVHEELSKSDPGFCLAYLAHSMLFVNNFY 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             +     + +  K+   E+               G+G+TE   GTD+  +T+      D
Sbjct: 105 HCSNEEQRERYLEKVIDGEW-------------VGGMGMTEPGAGTDVLGMTTTAVDDGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +      F++ A+++ R+  F++     D    G       +K+G R 
Sbjct: 152 HYVVNGTKTYITNGCEGHCFLVYAKLDDRITSFVI-----DRDCPGFSTSNHIDKLGMRG 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +   EL F +        L    G +  M     +  L  A MSV      +   + YA 
Sbjct: 207 STMSELIFEDCRVPKANLLGEPGGGLTHMMRNLEIERLTLAAMSVGIATRCVEIMVDYAA 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R      L     ++R I D      AA  L++ +A   D  K RS   + A       
Sbjct: 267 QRKAFKQPLNRFGQIQRYIGDGYAMTEAARCLTYNVARDVDPNK-RSRVGSDA------A 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +   +   V   AM+ +GG+GY  E  + R +R++    I  G+  A   ++   L
Sbjct: 320 KLFAAPVGKQVADWAMQVMGGAGYCREYPVERLWRDAKLLEIGGGTIEAHQKNITKDL 377


>gi|315051740|ref|XP_003175244.1| aidB protein [Arthroderma gypseum CBS 118893]
 gi|311340559|gb|EFQ99761.1| aidB protein [Arthroderma gypseum CBS 118893]
          Length = 618

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 123/584 (21%), Positives = 207/584 (35%), Gaps = 93/584 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    I       D +L       L +  PS + ++       V+S    + 
Sbjct: 4   SSSTEGFFQAQPLIQP-QIEEDGVLRRIISLHLPSPLPSSLEEDFTRFSRLVISKPVLDY 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W AL   +I +GL     +  +     K 
Sbjct: 63  AAEAERNQPYLKPLSTFGIENKQDSLVTSEGWRALQDINIREGLVGLAPEPGWAVNDTKW 122

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
             ++        ++    HL +PS       A++T P    D A ++ SR  D  N    
Sbjct: 123 NTRV--------SKGIKSHLWTPSS------AMVTCPGSMTDGAARLLSRHLDGENGQIF 168

Query: 192 QKT-----------SVAIGLGLTEKRGGTDIAAITSQGQK------ISD----------G 224
            +            +   G  +TE++GG+D+    +  +K        D          G
Sbjct: 169 AEALKRLTSRDPTIAWTSGQWMTERKGGSDVRGTETVARKLTPQEMEEDAGVDSVGMPLG 228

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLK 276
            + L G KWF S+  ++  IMLA+  E  +  F  P  R ++   P     NG+  QRLK
Sbjct: 229 PWRLDGFKWFSSATDANMSIMLAKTGENSISAFYAPLRRQVQGKDPKASELNGVRIQRLK 288

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K G ++  T ELE     G+L+G        +  +  +    + I SV     SLA   
Sbjct: 289 KKFGTKALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRAGNCIASVGYWGRSLAICR 348

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI- 395
            Y++ R  SG +L D P   R +A   +  AA+  L+F +      ++  +  +  A   
Sbjct: 349 AYSKVRVTSGRLLQDTPSYIRTLARDHVKYAASMHLTFFILALLGISEGGTISSCMAAQV 408

Query: 396 ----------------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYR 435
                           + P+ K      A   +  +ME +GG GY+E       IAR +R
Sbjct: 409 NIIPQDKNHTLQLIRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFR 468

Query: 436 ESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
           ++   SI  G+   M  D++ +++  +G +  + L   +   L  +           +  
Sbjct: 469 DTCVLSIWEGTTEVMADDLMRVVKGRQGPDCLDALDKWVSYALKVARSHSFDKEEAVLRQ 528

Query: 494 C-------------KEDKGLARFLTEKIALASSAAALYRAGMND 524
                         +E     R   + +        L      D
Sbjct: 529 LWVDFLSDVRSKGREELNWYGRKCLKVLERLVCGCLLILDASRD 572


>gi|254461513|ref|ZP_05074929.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206678102|gb|EDZ42589.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 386

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CEGDQRERYLLPAVRGEKMDALAMTEPEAGSDVRGMKCSAVRDG-GDWVINGSKHFISGG 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D FI+          +     +   L D    G   +     + +R      L+F++
Sbjct: 160 EHADFFIVFVATGEDQTPKGPKKRITAFLVDRGTPGFDAREGYKSVSHRGYKNYVLDFTD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      L  A  SV   R     A++YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFAVMNEWLYATRLTVAAFSVGRARRCFDYALNYAAERKQFGQQIS 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADWLTLSGAWRLDQGLP-------ANREIASAKLYATEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 333 VTDTTLQIHGGMGLMDDYPIERFWRDARVERIWDGTSEIQRHIISRDLFR 382


>gi|68536635|ref|YP_251340.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|260577836|ref|ZP_05845770.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|68264234|emb|CAI37722.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|258604063|gb|EEW17306.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 389

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 131/379 (34%), Gaps = 31/379 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
            P   + D+    P  + ++R+    GL        +  +     A  +    L  + Q 
Sbjct: 32  DPVAAQHDRDHTFP--YDVVRQMGEMGLFGLPISEEYGGMGGDYMALGVALEELARVDQS 89

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  L +        +    +    + + P + +                  G GLTE  
Sbjct: 90  VAITLEAGVSLGIMPIYRFGSDEQKQTYLPNLVAG-------------KNLAGFGLTEPE 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRV--GCFLVPRLL 262
            G+D     +  +    G + ++G K F+++  +D    +    V G+   G   +  ++
Sbjct: 137 AGSDAGGTKTTAKLDG-GEWVINGSKQFITNSGTDITSLVTATAVTGQRENGKKEISAII 195

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLD 319
                 G   +   NK+G  ++ T  L F N        +     G    + IL    + 
Sbjct: 196 VPSGTPGFTAEPSYNKVGWNASDTHPLTFDNVRVPEENLVGERGRGFAYFLSILEEGRIA 255

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A ++    +  + E + YA+ R   G  + +   +   IA +      A    +  A  
Sbjct: 256 IAALATGAAQGCVDECVRYAKERTSFGKPISEYQAISFKIARMEARAWTARQAWYAAAAK 315

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               ++ S+E       A I K    + A     +A +  GG G++ E  +ARHYR+S  
Sbjct: 316 MAAGENFSKE-------ASIAKMVASEAAMDNARDATQIHGGYGFMNEYRVARHYRDSKI 368

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +   L
Sbjct: 369 LEIGEGTTEVQQMLIARAL 387


>gi|325122359|gb|ADY81882.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 607

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/519 (18%), Positives = 180/519 (34%), Gaps = 87/519 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       L A          
Sbjct: 71  ERVTVNPEVGVALKAFADAGLMSAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P   K +   +   +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGEPEKVKPYVNAMIEGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++  K  DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 178 RTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVP 237

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D +      N +    + +K+G R      L F              G L+G+   
Sbjct: 238 RKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              LI  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRLQ-GRSRSERNPSSPQIPLIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      ++ A AL    A   D+      A+ R++      ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQAHQLLDLLTPVVKSWSSE 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L    +      
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLS 476

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALAS 512
              L  ++ +T+EQ            L+D      +   L R +TEK        + LA+
Sbjct: 477 MKLLHAKIMNTIEQA------NAEPSLKDHADQLDQKWQLIRNVTEKLHALTDVELQLAN 530

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +A  L   G   +  ++L     D     H ++    + 
Sbjct: 531 AANYLEAFGHLVVGWLWL-----DQAVVIHKLMPNSTDP 564


>gi|290958932|ref|YP_003490114.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260648458|emb|CBG71569.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 608

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 93/550 (16%), Positives = 185/550 (33%), Gaps = 79/550 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFTDADRNPPV---FDP---ETNTAPVPASFKKSYKAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWAFAELILGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNEVQKHIAQVAVEKRWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+ L D      G  NG+   
Sbjct: 193 VKRFITSGEHDMEENILHYVLARPEGHGPGTKGLSLFLVPKYLFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGTDLADFMDKAAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +      A   ++ PI K +  +     +A++++  GGSG+++E  I 
Sbjct: 373 IQDEIQVKEAAGEDFKALEALNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R++  +++  G+      D     ++         L   +++   LG  G+++ T  
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNTLAEEIKKFLALGEGGEQLDTAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   L   +A        +Y+ G+N         R L         + 
Sbjct: 493 EHLAKAAVELEAIVGLLLTDLAATEQDVKNIYKVGLNT-------TRLLMASGDVVVGYL 545

Query: 544 MLHGRFNAAH 553
           +L G   AA 
Sbjct: 546 LLKGAAVAAE 555


>gi|302534510|ref|ZP_07286852.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302443405|gb|EFL15221.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 385

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 129/365 (35%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
                +    G+        F        HK  A      ++       S      +   
Sbjct: 40  RDFYYKLGELGIFGINVPEEFGGAGLDT-HKFEAVLYEETSRAGVNFGGSGVHVLLALPY 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + ++ T    K + P   S E                 L +TE   G+D+A + +  +  
Sbjct: 99  IKMLATDEQKKRFLPNFVSGEEM-------------WALAMTEPGTGSDVAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  I+ A+          F +     D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTSAPSAEDRRFGISLFAVDTKSEGYSIGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G +++ T EL F +       LLG+       +           A  + +    ++ 
Sbjct: 206 DKLGLKTSDTAELAFVDVKVPVEDLLGEEGKGFYYLGHNLASERWGIAFGAYAQAAAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y   R V G  +      K  +A    ++ AA A++ R   + D  +    EAA A
Sbjct: 266 FAQQYVTDRTVFGKPVSHFQNTKFELAACQAEVDAAQAVADRALEALDAGELTPAEAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +C ++A  VI   ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFCTEVAHRVIDRCLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIMKSI 378

Query: 454 VLNLL 458
           +   +
Sbjct: 379 IAKSM 383


>gi|260429765|ref|ZP_05783741.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260419248|gb|EEX12502.1| acyl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 386

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +  Q  +   G + ++G K F+S  
Sbjct: 101 CEGEQVEKYLMPAVRGEKMDALAMTEPDAGSDVRGMKCQAVRDG-GDWVVNGSKHFISGA 159

Query: 239 MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G     R     +   L D    G    R  N + +R      L F N
Sbjct: 160 EHADFVIVFVATGVDETPRGPKKRITCFLVDRGTPGFEIARGYNSVSHRGYQNSILYFDN 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A  SV   R     A+ YA  R   G  + 
Sbjct: 220 CRLSDAQVLGEVDGGFDVMNEWLYATRITVATNSVGRARRVYDHAVQYAAERKQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADWLTLASAWRLDQGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V   A++  GG G ++E  I R +R++    I  G+       +   + +
Sbjct: 333 VTDAALQIHGGMGLMDELPIERFWRDARVERIWDGTSEIQRHIISREIFR 382


>gi|183980720|ref|YP_001849011.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
 gi|183174046|gb|ACC39156.1| acyl-CoA dehydrogenase [Mycobacterium marinum M]
          Length = 382

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 138/384 (35%), Gaps = 32/384 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSP 154
           E+ P  H   R+ + D +H  +         R Q   A    AARL L+          P
Sbjct: 6   EYTPEHHQF-RQLVRDFVHRIVVPAHEPGERRGQWDRALFTEAARLGLLGFSVPERFGGP 64

Query: 155 SVTSASMVALMTTPRVHKD-----------------WAPKIFSREYDPTNKAPMQKTSVA 197
            V      A++                         +   + + E        +      
Sbjct: 65  GVNDFRYNAIVIDELQRAGAASEAIAFTLQNDVVLPYLTDLTTLEQQQRWLPGVVTGDTV 124

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+ +TE   G+D+A I +   +     Y ++G K F+S+  S    ++A          
Sbjct: 125 LGIAMTEPGAGSDLAGIHTTAVRDGSH-YVVNGAKTFISNGQSGDLFVIAVRTSPERHQG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL- 315
           +  L+ D +  G    R   KIG  +  T EL F++    +   L N   G  + M+ L 
Sbjct: 184 LSLLVVDATTPGFHRGRSLEKIGLHAQDTSELSFTDMRVPVENLLQNEGMGFYQLMRNLP 243

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ +V+     LAE + Y R+R   G  +      +  +A++A +I  A     
Sbjct: 244 QERLALAVGAVAAAEGILAETLDYVRQRKAFGSPIASFQHSQFLLAELATEIDIARTY-- 301

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D+  ++          A   K+W  ++        ++  GG GY+ E  +++ +
Sbjct: 302 -----LDDCLAQHLAGELTAARAARLKWWTTELQVRTADRCLQLHGGYGYMREYRVSQAF 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
            ++   +I  G+   M   +   L
Sbjct: 357 VDARIQTIYGGTNEIMKTIIAKDL 380


>gi|87121583|ref|ZP_01077471.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86163115|gb|EAQ64392.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 393

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 132/380 (34%), Gaps = 37/380 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARL 140
           P++       ER+D+         ++      GL  +     +        ++ + A  +
Sbjct: 41  PRVLEANRN-ERFDR--------EIMNELGELGLLGATLPEEYGGSGINYVSYGLIAREV 91

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S      +    +    + + PK+ S E+                 
Sbjct: 92  ERVDSGYRSAMSVQSSLVMHPIYSYGSEVQRQKYLPKLASGEW-------------VGCF 138

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D A+++++  ++  G        W  +SP++D F++ A++EG +  F++  
Sbjct: 139 GLTEPDSGSDPASMSTRAIQVEGGYRLTGNKMWITNSPIADVFVVWAKLEGVIRGFIL-- 196

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYL 318
              D   +GL   +++ K   R++ T E+   + F                         
Sbjct: 197 ---DKGMSGLSAPKIEGKFSLRASITGEIVMDDVFVPQENIFPDIKGLAGPFGCLNKARF 253

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++         A  Y   R      L    ++++ +AD+  DI+       ++  
Sbjct: 254 GIAWGAMGAAEFCFDAARTYTLDRKQFNRPLAANQLIQKKLADMQTDISLGLQGCLQMGR 313

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+ +   E       +  + K   C  A  +   + +  GG+G  +E  + RH     
Sbjct: 314 LMDQEQCPVE-------LISLMKRNNCGKALDIARVSRDMHGGNGISDEFGVIRHVMNLE 366

Query: 439 ANSILLGSGNAMVLDVLNLL 458
           A +   G+ +   L +   +
Sbjct: 367 AVNTYEGTHDVHALILGRAI 386


>gi|15828376|ref|NP_302639.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221230853|ref|YP_002504269.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|3063885|emb|CAA18570.1| putative acyl-coA dehydrogenase [Mycobacterium leprae]
 gi|13093806|emb|CAC32094.1| acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219933960|emb|CAR72662.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 611

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 98/523 (18%), Positives = 194/523 (37%), Gaps = 72/523 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
               ++ L  +        A   A   + N P  H           +    ++    R  
Sbjct: 35  ADTAYEMLTEVSRLAEGPVAASFAE-GDRNPPVFHP------ETHSITLPESFKKSCRAV 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G   +  D +       +A  + A   +LM    A  + +     A+++  + T + 
Sbjct: 88  AEAGWSKAGIDEALGGTPMPKA-LLWALHEHLMGANPAVWIYAGGAGFANILYHLGTEKQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA     R +  T             + LTE   G+D+ A  ++     D  + + G
Sbjct: 147 KK-WAVWAAERNWGST-------------MVLTEPDAGSDVGAGRTKAVHQEDDSWHIDG 192

Query: 231 HKWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+ L D      G  NG+  
Sbjct: 193 VKRFITSGDSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + +AT EL F        G+L+GD++     + ++     +     +++ +
Sbjct: 253 TNVEHKMGLKVSATCELSFGQHGVPAKGWLVGDVHDGIAQMFEVIEQARMMVGTKAIATL 312

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
                 A+ YA+ R                  +   P ++R++           AL    
Sbjct: 313 STGYLNALEYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYT 372

Query: 377 ANSFDEAKSRSEEAAYA-------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A   D A + +     A        +M P+ K    + A A + E+++ +GGSG++++  
Sbjct: 373 ATFQDAAVAEAVHGVDAKLAVKINDLMLPLVKGVGSEQAYAKLTESLQTLGGSGFLQDYP 432

Query: 430 IARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL---FEQLFSTLEQDLGSSGKKV 483
           I ++ R++  +S+  G+      D      + +KG  L     Q+   ++ + G+   K 
Sbjct: 433 IEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALSYVSGQIQQFVDSETGNGRLKS 492

Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
              L        + +G+   LT  +  A     +LY+ G+  +
Sbjct: 493 EREL--LAKALTDIQGMEASLTGYLMAAQQDVTSLYKVGLGSV 533


>gi|86138907|ref|ZP_01057479.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85824554|gb|EAQ44757.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 406

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/432 (19%), Positives = 154/432 (35%), Gaps = 46/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L       P  +  +L    E +++ +A+  A+      P++ A       ++  E  
Sbjct: 13  PDLGGFTWEDPLRMEDQLTED-ERMITASARAYAQ--EKLQPRVTA------AYENEETD 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSA 159
           PA    +      GL  +     +  +          AR           +MS  S    
Sbjct: 64  PAIFREMG---EMGLLGTTIPEEYGGLGGGYVSYGLVAREVERVDSGYRSMMSVQSSLVM 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + PK+ S E+                 GLTE   G+D A + ++ +
Sbjct: 121 YPIYAYGSEEQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTRAE 167

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K + G        W  ++P++D F++ A+ E   G   +   + +    GL   +++NK 
Sbjct: 168 KTATGYKLTGSKMWISNAPIADVFVVWAKSEEHGGK--IRGFVLEKGMKGLSAPKIQNKA 225

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+             +     V+ +K     L+ A   +S   +  AEA  +
Sbjct: 226 SLRASITGEIVMDGVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGAMGAAEACWH 281

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L +  + +  +A++  +I      S R+    DEA +       A
Sbjct: 282 AARQYGLDRTQFGRPLANTQLFQLKLANMQTEITLGLQSSLRVGRLMDEANA-------A 334

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  I K   C  A  +   A +  GG+G   E ++ RH       +   G+ +   L 
Sbjct: 335 PEMISIVKRNNCGKALEIARNARDMHGGNGISLEFNVIRHMVNLETVNTYEGTHDVHAL- 393

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 394 ILGRAQTGLQAF 405


>gi|313228507|emb|CBY23659.1| unnamed protein product [Oikopleura dioica]
          Length = 421

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 145/376 (38%), Gaps = 34/376 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH- 150
           E+WDK     A   + R +   GL C      +  +     + + A      A  +    
Sbjct: 63  EKWDKNHMPDA--EIWREAGEAGLLCIDTPAEYGGIGAPFEYSMVACEEQAYAGPKFYGP 120

Query: 151 -LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S   A  +    T      + P + + E                 +G+TE  GG+
Sbjct: 121 GFGLHSGIVAPYITSFGTEEQKHKYIPSMTTGE-------------TISCIGMTEPSGGS 167

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+ A+ +   +  D  + L+G K F+S+  +++  ++ A+   EGR    +   L++   
Sbjct: 168 DLQAMKTNAVRDGDD-WILNGSKTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTRE 226

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDS 320
            NG    +   KIG  S  T EL F +        L    G  +   +++       +  
Sbjct: 227 HNGFNKGKNLRKIGQHSYDTAELFFDDVRLPASALLGEEEGLNKGFYMMMNELPRERVGC 286

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +++ +  +  +   Y + R   GG L D+ V+K ++A+I  +I +   ++      +
Sbjct: 287 ALEALARLENAFEQTRQYTQERKAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLY 346

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +  +E A+         K +  +   + + + ++  GG GY+ E  IA+ Y  +   
Sbjct: 347 SRGELDNETASMF-------KLYATEKYVSCVNKLLQHWGGWGYMWEYDIAKEYAGARVF 399

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   M   +  
Sbjct: 400 TIYAGTSEIMKELISR 415


>gi|289643093|ref|ZP_06475224.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289507137|gb|EFD28105.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 386

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 118/358 (32%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R++   GL        +                   A          +       A
Sbjct: 45  RELWRKAGAAGLLGLGLPAEYGGGGASYRFNAVVDAELYHAGATGPGFTVHNDVCGPYFA 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + TP     W P + S E             +   + +TE   G+D+  + ++  +   
Sbjct: 105 ELATPEQLGRWVPGMTSGE-------------LVAAIAMTEPGAGSDLRGVRTRATRTPG 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G + L+G K F+S+ +    +++    G  G   +  L+ +    G    R   K+G  +
Sbjct: 152 G-WLLNGAKTFISNGIHADLVIVVAQTGSDGDAGLSLLVVERGMAGFARGRNLGKVGLHA 210

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F N       +LG        +        L  A+ +V+ M   LA+ + Y R
Sbjct: 211 QDTAELSFDNVAVPDANVLGQPGRGLRYLMANLAQERLTIAVQAVAAMEGVLADTLDYVR 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +         +A++A  + AA           D         +     A + 
Sbjct: 271 TRTAFGQPIGRFQHSAFLLAELATTVKAARVFV-------DWGVEEHLAESLGADTAAVI 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K    +    V+   ++  GG GY  E  + R + ++   +I  G+   M + +   L
Sbjct: 324 KLHTTEAQQRVVDRCLQLHGGYGYTTEYRVGRAWADARVQTIYGGTSEMMKVIISRGL 381


>gi|156359967|ref|XP_001625034.1| predicted protein [Nematostella vectensis]
 gi|156211846|gb|EDO32934.1| predicted protein [Nematostella vectensis]
          Length = 431

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 134/378 (35%), Gaps = 24/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+K +  PA H L ++    G         +  +    +  +  A      
Sbjct: 64  KEINPFVDEWEKAKMFPA-HELFKKFGKAGYFGVNKPVKYGGMGLDYSFSVAMAE----- 117

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G +    V  A  V A M TP + +       S E       P         LG++
Sbjct: 118 --ELGSIKCGGVPMAIGVQADMATPALVRFG-----SEELKQQFLVPTIAGDFVTCLGVS 170

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I +   K  D      G  W  +   +D   +LA  +     F    +  
Sbjct: 171 ETGAGSDVASIKTTAVKDGDDYVINGGKMWTTNGIQADWMCLLANTDKGHPHFNKTLICL 230

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDS 320
             +  G+   R  +K+G   + T E  F N        +     G V  M   +   + +
Sbjct: 231 PLNLPGIQRARNIDKLGMHCSDTAEFYFENVRVPQSYRIGEEGMGFVYQMLQFVEERVFA 290

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +  +   + E   Y + R   G  ++D   +   +A++  ++    +L +R  +  
Sbjct: 291 GASVLVSLERLIKETAEYCKGRTAFGKSILDNQYVHYRLAELQTEVELLRSLVYRTTDLH 350

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + K          ++A + K    ++   V    ++  GG G+  +  ++R YR++   
Sbjct: 351 IKKKDS-------NLLASMLKLKAGRLVREVTDSCLQFWGGMGFTSDVEVSRAYRDNRLL 403

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+   M+  +   +
Sbjct: 404 SIGGGADEVMLSIICKEM 421


>gi|313205570|ref|YP_004044747.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312444886|gb|ADQ81241.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022702|gb|EFT35727.1| Acyl-CoA dehydrogenase, short-chain specific [Riemerella
           anatipestifer RA-YM]
 gi|325335002|gb|ADZ11276.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 592

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/477 (17%), Positives = 174/477 (36%), Gaps = 53/477 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
             ++     G        S+  +       + A      A    A    + +      + 
Sbjct: 62  ECMKEIGAMGFLGISVPESYGGLGMGFVTTMLACDYLSGATGSLATAYGAHTGIGTLPIL 121

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + + P + +              +      LTE   G+D  +  ++ +   D
Sbjct: 122 LYGTEAQKQKYLPDLATG-------------AKFGAYCLTEPDAGSDANSGKTKARLSED 168

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G  Y ++G K ++S+   +D F   A+++    +  F+V R  E  +P  L +   ++K+
Sbjct: 169 GKHYIINGQKMWISNAGFADTFTFFAKIDDDKNITGFVVNR-SELENPESLTFGEEEHKL 227

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R+++T ++ F++       LLG+ N       +   +  +  A   +   R  L+ +I
Sbjct: 228 GIRASSTRQVFFNDMKVPVECLLGERNNGFKIALNALNVGRIKLAAACLDAQRRILSYSI 287

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +     +++ +A++A  I  + A S+R A    +              
Sbjct: 288 QYANERKQFGTSISTFGAIRKKVAEMATGIFVSEAGSYRAAKDVQDKIDELVAGGMNHQE 347

Query: 397 A------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           A             I K +   +      E ++  GG G+ E+  +   +R+S  + I  
Sbjct: 348 AELKGVEEYAVECSILKVFVSDLLQQSADEGIQIFGGMGFSEDTPMEAAWRDSRISRIYE 407

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR-DSISLCKEDKGLARF 503
           G+     L  + +L K     +    +    +G     + +    D  +   E+K +   
Sbjct: 408 GTNEINRLLAVGMLIKKAMKGQIDLMSPAMAVGKELMSIPSFETPDYSAFMSEEKAMIAN 467

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560
           L +K+ L  S AAL +               +D     H +L    NA+ I++ +Y+
Sbjct: 468 L-KKVFLMVSGAALQKY-------------MMDIEKQQHLLL----NASEILNQIYM 506


>gi|119504010|ref|ZP_01626091.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119460013|gb|EAW41107.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 601

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 92/506 (18%), Positives = 180/506 (35%), Gaps = 62/506 (12%)

Query: 78  NYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +Y  P           WD  KV   P            GL C         +        
Sbjct: 51  DYFVPIRKTVDLNQPDWDGEKVVMIPEIKIAYDAVAEAGLICPDQSYEMGGMQLPLVVTS 110

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A      A        + +  +A+++    +    + W P++ + E+  T         
Sbjct: 111 CAMGYITAAASTTNGFHALTAANANLLETHASEEQIETWVPRLRTGEFAGT--------- 161

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
               + L+E + G+ +A + ++     DG Y + G+K ++S    +        +LA++E
Sbjct: 162 ----MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKIWISGGDHELSSNIVHAVLARIE 217

Query: 251 G------RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF---SNTFG 296
           G       +  F+ P+ L  EDGS    N +    L +K+G R   +  L F        
Sbjct: 218 GAPPGVKGISMFICPKFLLNEDGSVGARNDVQLAGLFHKMGGRGQTSTALNFGEGEGAVA 277

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +       +        ++ YA+ R              
Sbjct: 278 YLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQYSLDYAKERPQGRKASSKDPLAD 337

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPI 399
              LI+   ++R +         A +L    +   D+ K+  +E            + PI
Sbjct: 338 PVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDWKTHPDEVGRTGAFELLDFLTPI 397

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL- 458
            K W  +  P     A++ +GG+GY  E  +   YR++  N I  G+     LD+L    
Sbjct: 398 VKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDNRLNPIHEGTTGIQSLDLLGRKV 457

Query: 459 -EKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLCK-EDKGLARFLTEK---I 508
            + G   ++   S +E  L ++        ++  L++++   K   + L   + E+   +
Sbjct: 458 PQNGLAGYQACLSAIESTLEAAEGVADCAPMLIALQNALGHLKSTTEVLLGSMLERDIDL 517

Query: 509 ALASSAAALYRAGMNDIADVFLENRF 534
            +A+SA  L   G   +  ++L    
Sbjct: 518 VMANSAKYLELFGHVVVGWMWLRQGL 543


>gi|149597691|ref|XP_001521173.1| PREDICTED: similar to Acad9-prov protein, partial [Ornithorhynchus
           anatinus]
          Length = 321

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 66/338 (19%), Positives = 126/338 (37%), Gaps = 37/338 (10%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
            + +  +        R   +  +    A  L +        + +  + +    + PK+ S
Sbjct: 7   PKKWGGLGLSNTMYARLGEIISLDASIAVTLAAHQAIGLKGILIAGSDKQKAKYLPKLAS 66

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLSSPM 239
            EY                  LTE   G+D A+I ++ +   DG Y  L+G K ++S+  
Sbjct: 67  GEY-------------IAAFCLTEPGSGSDAASIQTKAKLTEDGKYFILNGSKIWISNGG 113

Query: 240 -SDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            ++ F + A+ E      +    +   + +    G+   + ++K+G R + T E+ F NT
Sbjct: 114 LANIFTVFAKTEVIDYNGLRKDKITAFIVERDFGGVTNGKPEDKLGIRGSNTCEVYFENT 173

Query: 295 FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGI 348
              L    NV     +  K+ +  L+S   S+           +     YA  R      
Sbjct: 174 KVPL---ENVIGEVGDGFKVAMNILNSGRFSMGSAAAGMLKKLIEMTAEYACTRKQFNKS 230

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCK 406
           + +  ++K   A +A       ++++  A   D       S EAA         K +  +
Sbjct: 231 ISEFGLIKEKFALMAQKAYVMESMAYLTAGMLDRPGFPDCSVEAAM-------VKVFSSE 283

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            A   ++EA++ IGG GY++     R  R+S    I  
Sbjct: 284 GAWICVSEALQIIGGLGYMKNYPYERFLRDSRILMIFE 321


>gi|91794368|ref|YP_564019.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
 gi|91716370|gb|ABE56296.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans
           OS217]
          Length = 391

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 125/369 (33%), Gaps = 37/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  S     +        ++ + A  +  +       +   S      +
Sbjct: 52  REIMSELGALGLLGSTLPEQYGGSDANYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + PK+ S E+                 GLTE   G+D   + ++  K  
Sbjct: 112 YAYGSEAQRMKYLPKLASGEW-------------VGCFGLTEPDVGSDPGGMKTRATKTQ 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+++G +  F++     +    GL   +++ K   R
Sbjct: 159 GGYVLTGAKMWITNSPIADVFVVWAKLDGEIRGFVL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ T E+   N         +     V  +K     L+ A   ++   +  AE   +A R
Sbjct: 214 ASITGEIVMDNVEV----GEDALLPNVSGLKGPFGCLNKARYGIAWGALGAAEFCWHAAR 269

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    ++++ +AD+  DI        +     D         A     
Sbjct: 270 QYSLDRIQFNRPLAATQLIQKKLADMQTDITMGLFACLQAGRLMDSE-------ALPVEA 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L +L 
Sbjct: 323 ISMIKRNSCGKALDIARMARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHDIHAL-ILG 381

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 382 RAQTGLQAF 390


>gi|90425769|ref|YP_534139.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107783|gb|ABD89820.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 404

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 125/373 (33%), Gaps = 39/373 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGH 150
           ER D+  FH             GL        +        A+ + A  +  +       
Sbjct: 58  ERTDREIFHEMG--------ELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSM 109

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               S      +         K + PK+ S E+                 GLTE   G+D
Sbjct: 110 NSVQSSLVMHPIYAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSD 156

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ +K+SDG        W  ++P++D F++ A+         +   + +    GL
Sbjct: 157 PGGMKTRAEKVSDGYRLTGTKMWISNAPIADVFVVWAKSPEH--NNQIRGFILEKGMKGL 214

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV----- 325
              ++  K+  R++ T E+        ++G+  +             L+ A   +     
Sbjct: 215 SAPKIGGKLSLRASITGEIVMDGV---VVGEEALLPNVAGLKGPFGCLNRARYGISWGVM 271

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 +A A  Y   R      L    ++++ +AD+  +IA     S R+    DE K 
Sbjct: 272 GAAEDCMARARQYTLDRKQFNRPLAATQLVQKKLADMQTEIALGLQGSLRVGRLMDEGK- 330

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  A  M  I K   C  A  +   A +  GG+G   E  + RH +     +   G
Sbjct: 331 ------MAPEMISIVKRNNCGKALDIARMARDMHGGNGIQIEYHVMRHAQNLETVNTYEG 384

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   +
Sbjct: 385 THDVHALILGRAI 397


>gi|114570211|ref|YP_756891.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340673|gb|ABI65953.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 406

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 143/410 (34%), Gaps = 45/410 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A+       +L        R  + +  PA    +      GL       
Sbjct: 34  ERMVRDTARSYAQD------KLQPRVIEAYR--EEKTDPAIFREMG---DQGLLGCTLPE 82

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +        A+ + A  +  +       +   S      +    +    + + PK+ S 
Sbjct: 83  EYGGAGLGYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRQKYLPKLASG 142

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D A + ++  K + G        W  +SP++D
Sbjct: 143 EW-------------IGCFGLTEPDAGSDPAGMKTRATKTATGYTLNGAKMWISNSPIAD 189

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +   G   +   + D    GL   ++  K+  R++ T E+   N        
Sbjct: 190 VFVVWAKSDAHDGK--IRGFVLDKGMKGLSAPKIGGKLSLRASITGEIVMDNVEV----G 243

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
            +     V  +K     L+ A   +S   +  AE   +A R     R      L    + 
Sbjct: 244 EDALLPHVSGLKGPFGCLNRARYGISWGAMGAAEFCWHAARQYGLDRIQFDKPLAQTQLY 303

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +I      S R+    DEA++       A  M  I K   C  A  +   A
Sbjct: 304 QKKLADMQTEITLGLQGSLRIGRLMDEAQA-------APEMISIMKRNNCGKALDIARMA 356

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 357 RDMHGGNGISEEFQVMRHMVNLETVNTYEGAHDVHAL-ILGRAQTGLQAF 405


>gi|183984005|ref|YP_001852296.1| acyl-CoA dehydrogenase FadE [Mycobacterium marinum M]
 gi|183177331|gb|ACC42441.1| acyl-CoA dehydrogenase FadE [Mycobacterium marinum M]
          Length = 387

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL        +  +       +  A       L       + +  +  ++ 
Sbjct: 42  DLRDQAKQMGLFGYAIPPQWGGLGLNLVQDVELAMELGYTSLAVRSMFGTNNGIAGQVLV 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W   I S               V     LTE   G+  A + ++  +  D
Sbjct: 102 GFGTDEQKARWLEPIASG-------------DVVASFALTEPGAGSSPAGLRTKAVRDGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++D F++ A+          +   L      G+       K+G  
Sbjct: 149 DWLITGQKRFITNAPVADLFVVFARTRPASDKSPGIAVFLVPAQSAGVEVGAKDAKMGQE 208

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F++        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 209 GAWTADVSFTDVRVDDAALVGGSEDIGYRAAMTSLARGRVHIAAIAVGAAQRALDESVAY 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  +    +++  +AD    + A  AL    A  +     R       RI   
Sbjct: 269 ASTATQGGVTIGSFQLVQAMLADQQTGVLAGRALVRDAARMWVSGADR-------RIAPS 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L + + L
Sbjct: 322 AAKLFCTEMAGKVADLAVQIHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQQLIIGSNL 381

Query: 459 EKGTN 463
            K  N
Sbjct: 382 IKAAN 386


>gi|121595295|ref|YP_987191.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120607375|gb|ABM43115.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 398

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 127/366 (34%), Gaps = 31/366 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPTEYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + PK+ S E+                 GLTE   G+D  ++ +   K+  G  
Sbjct: 116 SEAQKQKYLPKLASGEF-------------IGCFGLTEPDHGSDPGSMATHAYKVDGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ VE       +   + D    GL    +  K+G R++ 
Sbjct: 163 LKGNKMWITNSPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   + F           G          L+SA   ++   +  AE   +  R    
Sbjct: 223 TGEIVMDDVFVPEENAFPEVRGLK---GPFTCLNSARFGIAWGAMGAAEFCWHTARQYTL 279

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I      + R+    DE ++  E       +  + 
Sbjct: 280 DRKQFGRPLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLI 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 333 KRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 391

Query: 461 GTNLFE 466
           G   F 
Sbjct: 392 GIAAFA 397


>gi|254501549|ref|ZP_05113700.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222437620|gb|EEE44299.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 386

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 103/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +  Q  +   G + ++G K F+S  
Sbjct: 101 CEGEQKEKYLLPAVRGEKMDALAMTEPDAGSDVRGMKCQAVRDG-GDWVINGSKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D FI+          +     +   L D    G   +   N + ++      L F  
Sbjct: 160 EHADFFIVFVATGVDETPKGPKKRITCFLVDRGTPGFEVRDGYNSVSHKGYKNYILYFDQ 219

Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      L  A MSV   R     A++YA  R   G  + 
Sbjct: 220 CRLPNAQVLGEVDGGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQSIA 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D++         A       K +  +M   
Sbjct: 280 KFQGISFQVADMITEIDAADWLTLAGAWRLDQSLP-------ANREIASAKVYATEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   + +
Sbjct: 333 VTDTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDIFR 382


>gi|328880866|emb|CCA54105.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 404

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 136/396 (34%), Gaps = 44/396 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKIGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWVPQMYG----------DANDIKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   +        L                S    E 
Sbjct: 195 NTPGLSQGQKFQKHGIRASHTAEVVLEDVRVPGHCLLGGKDKLDERLARAREKSKAGGEQ 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +I+   +   +AD+A 
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRVQFGRPIIENQGVAFQLADMAT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  ++A  V A+A++ +GG+GY
Sbjct: 315 QIDAARLLVWRASWMATAGKPFTSA------EGSMSKLYASEVAKKVTAQAIQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             E  + R +R++   +I  G+     + +   L K
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRMVISRALAK 404


>gi|319760926|ref|YP_004124863.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115487|gb|ADU97975.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 387

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 147/382 (38%), Gaps = 33/382 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMA 144
             P  + W+  E  PA   L ++    G        ++  +    ++ + AA    +  A
Sbjct: 22  IDPFVDEWEANEIFPA-PELFKKMGRLGFLGITKPEAYGGMGLDFSYALAAAEAIGHARA 80

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q     +   S  +   +A   +  + +++              AP     V + +G++E
Sbjct: 81  QGVGMGIGVQSNMATPALAAFGSDELKREFL-------------APAIAGDVVVSIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVP 259
           +  G+D++++ ++ ++  D         W  +   +D   +L               +VP
Sbjct: 128 QGAGSDVSSLKTRARRDGDDYVISGSKMWITNGTQADWICLLCNTSDGPVHKNKSLIVVP 187

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+  Q++K K G  S+ T ++ F      +   +     G +  MK     
Sbjct: 188 LKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHRIGEEGMGFIYQMKQFQEE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            LD A   ++ + + + E   Y R+R   G  L+D   ++  +A++  ++ A  +L++R 
Sbjct: 247 RLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQYKLAELKTELEALRSLTYRA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             ++   +   E       +A + K    ++   +    M+  GG GY  +  ++R YR+
Sbjct: 306 TLAYVNGEDVIE-------LASMAKLKAGRLGREIADWCMQFQGGMGYTWDNRVSRAYRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M++ +   +
Sbjct: 359 YRLGSIGGGADEVMMMVIARKM 380


>gi|258650576|ref|YP_003199732.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258553801|gb|ACV76743.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 381

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/348 (20%), Positives = 133/348 (38%), Gaps = 32/348 (9%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
             I D  +  ++ +QAH++  A   L   L+A   +   VT         TP     W P
Sbjct: 63  AGISDFRYNMILMEQAHRLGVAPAVLGPALQADICLPYFVT--------GTPEQRARWLP 114

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I +              +    + +TE   G+D++ I ++  +  D  Y L G K F++
Sbjct: 115 GIVAG-------------TSITAVAMTEPGTGSDLSGIATKAVRDGDH-YVLDGSKTFIT 160

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           + ++   +++A   G      +  ++ +    G    R   K+G  +  T EL F+    
Sbjct: 161 NGINADLVIVAVRTGGHAHRGLSLIVVERGTPGFERGRKLAKVGLHAQDTAELSFAGARV 220

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG        +        L  A+ +V+    +L   I + R R   G  +    
Sbjct: 221 PAANLLGGEGSGFTQLTANLTQERLSVAVGAVAAAATALDRTIDHVRTRTAFGAPIGALQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IA++A +I  A     R     ++      +AA A+        W  +M   V+ 
Sbjct: 281 HIRFQIAELATEIDIAQQYVDRCVTEHNQGVLGPVDAAKAKW-------WTTEMQWRVLD 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             ++  GG GY+ E  IAR + ++    I  G+   M   +   ++ G
Sbjct: 334 ACVQLHGGMGYMTEHPIARAWADARVQRIYAGTTEIMKDLIGRSMKLG 381


>gi|54027013|ref|YP_121255.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018521|dbj|BAD59891.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 386

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 135/377 (35%), Gaps = 30/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P     D     P  + ++      GL    +   +  +     A  +    L  + Q  
Sbjct: 31  PVAAEHDAAHTFP--YEVVAGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSV 88

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V      +  ++W P++ S                    GLTE   
Sbjct: 89  AITLEAGVSLGAMPVYRFGNDKQKQEWLPQLTSG-------------RALAAFGLTEPDA 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLVPRLLED 264
           G+D +   +      +  + ++G K F+++  +D      + A    + G   +  +L  
Sbjct: 136 GSDASGTRTTAVADGED-WVINGRKQFITNSGTDITKLVTVTAVTGSQDGRKEISTILVP 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSA 321
               G   +   NK+G  ++ T  L F++        L     G    ++IL    +  A
Sbjct: 195 TDTPGFVAEPAYNKVGWNASDTHPLSFTDVRVPQENLLGERGRGYANFLRILDEGRIAIA 254

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +SV   +  + E++ YA+ R   G  +     +   IA +     AA A  +  A    
Sbjct: 255 ALSVGAAQGCVDESVRYAKERLAFGKPIGSYQAVAFKIARMEARAHAARAAYYDAAALML 314

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   ++       A I K    + A     +A +  GG+G++ E ++ARHYR+S    
Sbjct: 315 AGKPFKKQ-------ASIAKLVASEAAMDNARDATQIFGGNGFMNEYAVARHYRDSKILE 367

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    ++ +   L
Sbjct: 368 IGEGTTEVQLMLIGREL 384


>gi|332560800|ref|ZP_08415118.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332274598|gb|EGJ19914.1| Acyl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 377

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 139/355 (39%), Gaps = 21/355 (5%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +   + +  F  +   +      A  Y+   L    + +     ++++++   P  
Sbjct: 36  IEPAVLAQMGELGFFGMTVPEEMGGVGAD-YMSYALALIEIAAGDGAVSTVMSVHNAP-- 92

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S         P  + +      LTE   G+D +A+ S+ ++   G Y + G
Sbjct: 93  FNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAG-GDYVIDG 151

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F++S  ++   I+ A++EG  G   +   L      G    +++ K+G  ++ T  L
Sbjct: 152 EKVFITSGRLAGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEEKLGQEASDTCAL 211

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRH 343
            F +        +       E  +I L  L++  + ++   V +A+A   A     R R 
Sbjct: 212 RFDSLRVPEALRIG---AEGEGYRIALSSLETGRIGIAAQSVGMAQAALEAAVAYARERT 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI+   +   +A+    + AA  +    A   D  +    EAA A       K +
Sbjct: 269 SFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMA-------KLF 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A  ++++A++  GG GY  +  + R YR+     I  G+ +   + +L  +
Sbjct: 322 ASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGM 376


>gi|237838837|ref|XP_002368716.1| 2-methylbutyryl-CoA dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|211966380|gb|EEB01576.1| 2-methylbutyryl-CoA dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|221505418|gb|EEE31063.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
          Length = 356

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 135/365 (36%), Gaps = 33/365 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVA 163
            ++      G      +  +        + +               L+    T  +  + 
Sbjct: 10  EVIEGLFKQGYLGMEIEEKYGGSAMSFFNSLVVIEELARVDPSVAALVDIHNTLINRALT 69

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--I 221
           L  T    + + P++ S               +     L+E   G+D  A+ +  ++   
Sbjct: 70  LYGTEEQKEKFLPQLASN--------------MLGSFCLSESESGSDAFALKATARRSEN 115

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D        +W  ++  +  F++ A  +   G   +   L +    GL       K+G 
Sbjct: 116 GDAWVLNGAKQWISTAREAGLFLVFASYDLDQGYRGITAFLVEAGTAGLEVGPALEKLGI 175

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAE-----A 335
           ++++T E+  ++          V     E  KI I L +   + ++   + LA+     A
Sbjct: 176 KASSTCEVILNDVQVHDSC---VLGEVGEGYKIAIRLLNEGRIGIAAQMLGLAKGAFETA 232

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y   R   G  + D   ++   A +A +I AA  L+   A   +  +  ++EAA A  
Sbjct: 233 MRYMHDRQQFGRKIADFQGVQFEYAKLATEIEAAALLTANAALLREAGQPFAKEAAMA-- 290

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K+   ++A  V +  ++ +GG+G+ +   + + +R+S   +I  G+ N  +  + 
Sbjct: 291 -----KFKSSEVAQRVSSACIDFVGGNGFTKSFGLEKLFRDSKIGTIYEGTSNMQLQTIA 345

Query: 456 NLLEK 460
            +L++
Sbjct: 346 KVLQR 350


>gi|110681089|ref|YP_684096.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109457205|gb|ABG33410.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 407

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 58/445 (13%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
            P   G +   SD             +H++     E ++  +A+  A+       +L   
Sbjct: 13  APDLAGFDW--SDPF------RLAEQLHED-----ERMIQESAKAYAQE------KLQP- 52

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
                  D  E       + +     GL        +  +     A+ + A  +  +   
Sbjct: 53  ----RVIDAYENEAVAPEIFKEMGDMGLLGITLPEEYGGLGGSYVAYGLVAREIERVDSG 108

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S      +    T    + + PK+ S E                  GLTE  
Sbjct: 109 YRSMMSVQSSLVIYPIYAYGTEAQRQKYLPKLCSGE-------------SIGCFGLTEPD 155

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A + ++ +K   G        W  +SP++D F++ A+ E   G   +   + +  
Sbjct: 156 AGSDPAGMKTRAEKTPTGYKLTGSKMWISNSPIADVFVVWAKSEAHGGK--IRGFILEKG 213

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             GL   ++ NK+  R++ T E+             +     V+ +K     L+ A   +
Sbjct: 214 MKGLSAPKVGNKLSLRASVTGEIVMDGVEV----GEDALLPNVQGLKGPFGCLNRARYGI 269

Query: 326 SGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           S   +  AE   +A R     RH  G  +    + ++ +AD+  +IA     S ++    
Sbjct: 270 SWGVMGAAEFCWHAARQYGLDRHQFGKPIAGTQLFQKKLADMQTEIALGLQGSLQVGRLM 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D A++       A  M  I K   C  A  V   + +  GG+G   E  + RH       
Sbjct: 330 DSAQA-------APEMISIMKRNNCGKALDVARMSRDMHGGNGISGEFQVIRHMMNLETV 382

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF 465
           +   G+ +   L +L   + G   F
Sbjct: 383 NTYEGTHDIHAL-ILGRAQTGVQAF 406


>gi|297201058|ref|ZP_06918455.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|197712157|gb|EDY56191.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
          Length = 608

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 93/555 (16%), Positives = 191/555 (34%), Gaps = 79/555 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFADADRNPPV---FDP---ETNTAPVPASFKKSYKAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWAYAELILGANPAVWMYSSGPAFAGILFDE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      +          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNDVQKHIAKIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+ L D      G  NG+   
Sbjct: 193 VKRFITSGEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYLFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A 
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMYTAA 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +  + E A   ++ PI K +  + A  ++A++++  GGSG+++E  I 
Sbjct: 373 VQDEIQVKEAAGEDVTTENALNDLLLPIVKGYGSEKAYELLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R+S  +++  G+      D     ++         L   +++   LG+ G+++    
Sbjct: 433 QYIRDSKIDTLYEGTTAIQGQDFFFRKIVRNQGTALNSLAEDIKKFLALGTGGEELAGAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   +   +A        +Y+ G+N         R L         + 
Sbjct: 493 EHLAKAAVELEAIVGLMLTDLAATEQDVKNIYKVGLNT-------TRLLMASGDVVVGYL 545

Query: 544 MLHGRFNAAHIIDSL 558
           +L G   AA  +++ 
Sbjct: 546 LLKGAAIAAEKLETA 560


>gi|330869522|gb|EGH04231.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 278

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 39/308 (12%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ S E+                 GLTE   G+D  A+ ++ + +  G 
Sbjct: 1   GTQAQKEKYLPKLASGEW-------------IGCFGLTEPNHGSDPGAMITRARSVEGGY 47

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  +SP++D F++ A+ +       +   + +    GL    +  K+G R++ 
Sbjct: 48  RLSGSKMWITNSPIADVFVVWAKDDAGD----IRGFVLEKGWAGLSAPAIHGKVGLRASI 103

Query: 286 TVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           T E+   N F        D+    GP         L+SA   +S   +  AE   +  R 
Sbjct: 104 TGEIVMDNVFVPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQ 157

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    ++++ +AD+  +I  A     RL    DE  +       A  + 
Sbjct: 158 YTLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTA-------AVEIT 210

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  +  +   A + +GG+G  +E  IARH       +   G+ +   L +L  
Sbjct: 211 SIMKRNSCGKSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHAL-ILGR 269

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 270 AQTGIQAF 277


>gi|330826037|ref|YP_004389340.1| glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311409|gb|AEB85824.1| Glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 398

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 128/366 (34%), Gaps = 31/366 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPAQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + + P++ S E+                 GLTE   G+D  ++ ++  K+  G  
Sbjct: 116 SEAQKQKYLPRLASGEF-------------IGCFGLTEPDHGSDPGSMATRAYKVDGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ VE       +   + D    GL    +  K+G R++ 
Sbjct: 163 LKGNKMWITNSPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   + F           G          L+SA   ++   +  AE   +  R    
Sbjct: 223 TGEIVMDDVFVPEENAFPEIRGLK---GPFTCLNSARFGIAWGAMGAAEFCWHTARQYTL 279

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I      + R+    DE ++  E       +  + 
Sbjct: 280 DRKQFGRPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLI 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 333 KRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 391

Query: 461 GTNLFE 466
           G   F 
Sbjct: 392 GIAAFA 397


>gi|145223033|ref|YP_001133711.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443489|ref|YP_004076368.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215519|gb|ABP44923.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315261792|gb|ADT98533.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 386

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 140/379 (36%), Gaps = 37/379 (9%)

Query: 97  VEFHPAWHA-------LLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEA 148
           V  +P W         +  +    G+        +    +    + +        A +  
Sbjct: 26  VPHYPDWEKGGRMPRPVFEQMGSLGILGVAIPEEYGGGGQPDYRYNVVLQEEAARALVTL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +                  + W P + S              ++   + +TE   G
Sbjct: 86  STVRTQLEVILPYFLHYANAEQRERWFPGLASG-------------TLLTAIAMTEPGTG 132

Query: 209 TDIAAITSQGQKIS---DGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLL 262
           +D+A + +   +     D  Y ++G K F++  M +D  I++A+   +       +  L+
Sbjct: 133 SDLAGMRTTAVRDGSGPDADYIVNGAKTFITGGMQADLVIVVARTSTDPDNRRKGLTLLV 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R   K+G +   T EL F +       +LG+++ + G +        L 
Sbjct: 193 VEDGMEGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEAFGYLGHNLAQERLT 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+ SV+  R ++A AI Y R R   G  +      K  +A  + ++ AA A+  R  + 
Sbjct: 253 VAVGSVAQARSAIAAAIDYTRNRKAFGTPVASFQNTKFELAACSTEVEAAQAMLDRAVSL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             E +    +AA        TK +C +M   V+   ++  GG GY+ E  IAR Y ++  
Sbjct: 313 HVEGELSGADAAR-------TKLFCTEMQQRVVDRCLQLFGGYGYMMEYPIARLYTDARV 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+   M + +   L
Sbjct: 366 ARIYAGTSEVMKVMIAKSL 384


>gi|114761169|ref|ZP_01441084.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114545417|gb|EAU48419.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 386

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 103/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+ ++  Q  +   G + ++G K F+S  
Sbjct: 101 CEGEQVEKYLMPAVRGEKMDALAMTEPDAGSDVRSMKCQAVRDG-GDWVVNGSKHFISGA 159

Query: 239 MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G     R     +   L D    G    R  N + +R      L F N
Sbjct: 160 EHADFVIVFVASGVDETPRGPKKRITCFLVDRGTPGFEIARGYNSVSHRGYQNSILYFDN 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A  SV   R     A+ YA  R   G  + 
Sbjct: 220 CRLSDAQVLGEVDGGFDVMNEWLYATRITVATNSVGRARRVYDHAVAYAAERKQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADWLTLSSAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V   A++  GG G ++E  I R +R++    I  G+       +   + +
Sbjct: 333 VTDAALQIHGGMGLMDELPIERFWRDARVERIWDGTSEIQRHIISREIFR 382


>gi|85704082|ref|ZP_01035185.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85671402|gb|EAQ26260.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 386

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CKGEQIERYLHPAVRGERMDALAMTEPGAGSDVRGMKCTARRDG-GDWVLNGTKHFISGA 159

Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G           +   L D    G   +     + +R    + LEF +
Sbjct: 160 DHADFVIVFVATGEDQTDKGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMVLEFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + D      +  A M+V   R     A+ YA  R   G  + 
Sbjct: 220 CRLPGAQVLGEVDGGFAVMNDWLYATRITVATMAVGRARRCFDHALRYAAEREQFGQAIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQLADMITEIDAADLLTLNAAWRLDQGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   + +
Sbjct: 333 VTDATLQIHGGMGLMDDLPIERFWRDARVERIWDGTSEIQRHIISREMLR 382


>gi|328886006|emb|CCA59245.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 381

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 127/372 (34%), Gaps = 28/372 (7%)

Query: 93  RWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + D+ E    +   L       GL    +   +    +     ++               
Sbjct: 30  KVDEYEAAETYPEGLFTTLGEAGLLGLPYPEEYGGGGQPYEVYLQVLEELAARWAAVAVA 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S    +   +    T    + W P              M +  +  G  L+E + G+D 
Sbjct: 90  TSVHTLACHPLHTFGTAEQKERWLP-------------AMLEGRMIGGYSLSEPQAGSDA 136

Query: 212 AAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           AA++ + ++  DG          W      +  + + A+     G   +   L  G+  G
Sbjct: 137 AALSCKAERQDDGSGYRIHGTKAWITHGGRAGFYALFARTAP--GSHGISCFLAPGATEG 194

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           L +   + K+G ++  T    +         L+GD                L  A  +  
Sbjct: 195 LSFGAPERKMGLQAVPTTSAYWDGALLEADRLVGDEGQGLQIAFSALDSGRLGIAACATG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L  A+ YA  R   G  +ID   +   +AD+A  + AA A     A   D  +  
Sbjct: 255 LAQAALDAAVSYANERTTFGRRIIDHQGLGFLLADMAAAVDAARATYLDAARRRDLGRPF 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S +A+ A+++A          A  V  +A++ +GG GY  +  + R+ RE+    I  G+
Sbjct: 315 SRQASAAKLLA-------TDTAMKVTTDAVQVLGGYGYTRDFPVERYMREAKITQIFEGT 367

Query: 447 GNAMVLDVLNLL 458
                L +   L
Sbjct: 368 NQIQRLVISRGL 379


>gi|40063116|gb|AAR37963.1| acyl-CoA dehydrogenase family protein [uncultured marine bacterium
           561]
          Length = 601

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 92/506 (18%), Positives = 179/506 (35%), Gaps = 62/506 (12%)

Query: 78  NYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           +Y  P           WD  KV   P            GL C         +        
Sbjct: 51  DYFVPIRKTVDLNQPDWDGEKVVMIPEIKIAYDAVAEAGLICPDQSYEMGGMQLPLVVTS 110

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A      A        + +  +A+++    +    + W P++ + E+  T         
Sbjct: 111 CAMGYITAAASTTNGFHALTAANANLLETHASQEQIETWVPRLRTGEFAGT--------- 161

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
               + L+E + G+ +A + ++     DG Y + G+K ++S    +        +LA++E
Sbjct: 162 ----MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKIWISGGDHELSSNIVHAVLARIE 217

Query: 251 G------RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF---SNTFG 296
           G       +  F+ P+ L  EDGS    N +    L +K+G R   +  L F        
Sbjct: 218 GAPPGVKGISMFICPKFLLNEDGSVGERNDVQLAGLFHKMGGRGQTSTALNFGEGEGAVA 277

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +       +        ++ YA+ R              
Sbjct: 278 YLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQYSLDYAKERPQGRKASSKDPLAD 337

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPI 399
              LI+   ++R +         A +L    +   D+ K+  +E            + PI
Sbjct: 338 PVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDWKTHPDEVGRTGAFELLDFLTPI 397

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL- 458
            K W  +  P     A++ +GG+GY  E  +   YR++  N I  G+     LD+L    
Sbjct: 398 VKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDNRLNPIHEGTTGIQSLDLLGRKV 457

Query: 459 -EKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLCK-EDKGLARFLTEK---I 508
            + G   ++   S +E  L ++        ++  L+ ++   K   + L   + E+   +
Sbjct: 458 PQNGLAGYQACLSAIESTLKAAEGVTDCAPMLVALQTALGHLKGTTEVLLGSMLERDIDL 517

Query: 509 ALASSAAALYRAGMNDIADVFLENRF 534
            +A+SA  L   G   +  ++L    
Sbjct: 518 VMANSAKYLEFFGHVVVGWMWLRQGL 543


>gi|320102992|ref|YP_004178583.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319750274|gb|ADV62034.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 381

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 125/403 (31%), Gaps = 30/403 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E+  + + +     A     +           ++ E    W     R    G+      +
Sbjct: 2   EFDFTPSQRHWHDSAVQFAREHLTDDI----LERDEHRTFWREGWTRCAEFGIQGLPIPQ 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIF 179
           ++       +  I A         ++G + S + +  +    + L  T    + + P + 
Sbjct: 58  TYGGKGGGLSDTIAAMEGLGYGCPDSGLIFSINASMWTNSIPILLYGTEDQKRRYLPGLC 117

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                          S+      +E   G+D+ A+ S   +  D         W  S P+
Sbjct: 118 DG-------------SIIGANAASEPEAGSDVFAMKSTAVRQGDHWVLNGRKTWITSGPV 164

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D F+  A      G   +   L      G    R   K+G R+    E  F +      
Sbjct: 165 ADLFVSFAVTHPGQGVMGLSAFLVPKDAPGFRVVREIRKLGVRTVPMGEAVFEDCRIPAA 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L       E     +  +   +   ++  MR  L   + +AR R   G  +     + 
Sbjct: 225 NLLGKEGRGAEVFNCSMEWERGAILAAALGTMRRQLERCVQFARTRVQYGQPIGKFQAVS 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            AIAD+ + +     L +++    D  K        A I + I K    +        A+
Sbjct: 285 HAIADMHVRLETCRPLVYKIGWLKDRGKD-------ATIASAIAKLHVSESFVENSITAV 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              G  G++ E  I +  R+S  + I  G+       +   L 
Sbjct: 338 RIFGARGFVAEFGIEKDLRDSIGSLIYSGTNEIQKNLIARHLR 380


>gi|327277826|ref|XP_003223664.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Anolis
           carolinensis]
          Length = 534

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/533 (20%), Positives = 189/533 (35%), Gaps = 137/533 (25%)

Query: 35  NAYSSDSLLVALI-ANFPSVVHKE----LELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N +  D LL + + ++ P+ + +E    L+  G  V +     L R    + P+L  + P
Sbjct: 57  NPFQEDPLLKSYLGSHLPAQIFREVSLDLDRFGARV-TKEIDFLGRECELHPPRLLTFDP 115

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G+R D++                 L C+ W +           K  AA   L+A     
Sbjct: 116 WGQRKDQL-----------------LTCAAWKQ----------MKKVAAEEGLVAMA--- 145

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                                        + R+Y               G  +TE++GG+
Sbjct: 146 -----------------------------YERKYAQWXXXXXXXXXWTSGQWMTERKGGS 176

Query: 210 DI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-------VEGRVGCFLVPRL 261
           D+  +  +  ++ SDG Y L G KWF S+P SD  + LA+        +  +  F +  L
Sbjct: 177 DVVGSTETIAREQSDGTYSLHGFKWFTSAPDSDVALALARIMTPHGATKEGLSLFYLQLL 236

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
             +G  NG+  +RLK+K+G R   T E+         +         +  M  +  + +A
Sbjct: 237 DGEGKRNGMEIRRLKDKLGTRQLPTAEILLDGAKALRISPEGRGVPSIAAMLTITRIYNA 296

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I + + MR     A  YA +R   G  L D P+  + +A +                   
Sbjct: 297 ISAAAAMRRVTHLARDYATKRKAFGKTLNDHPLHVQTLARM------------------- 337

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                                   K A AV +E +EC GG G++E+  +A   R++    
Sbjct: 338 ------------------------KSAVAVASEGLECFGGQGFMEDTGLAAILRDAQVLP 373

Query: 442 ILLGSGNAMVLDVLNLLEKG-TNLFEQLF----STLEQDLGS-SGKKVITILRDSISLCK 495
           I  G+ N + LDVL  + K   +  +       + +   LGS   K  + +++ S+   +
Sbjct: 374 IWEGTTNILSLDVLRSIHKSHGDAMQAFLSSAQAKMASALGSPDLKTSVQVVQKSLQKLQ 433

Query: 496 ------------EDKGLARFLTEKIALASSAAALYRAGM---NDIADVFLENR 533
                       E +  AR     +AL      L   G       AD+    R
Sbjct: 434 KFSEEMGPKETSEAQMAARDFAYSLALIYGGVLLLEHGARTKASSADIAAAQR 486


>gi|215426250|ref|ZP_03424169.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
          Length = 294

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T   P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++
Sbjct: 22  TYVRPTLAGEKIGALAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVV 80

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A   G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  
Sbjct: 81  TAVRTGGPGAAGVSLLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAE 140

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +    +   +  A  + S  +  L     + R R   G  LI +  ++  +A++
Sbjct: 141 NSGFTQIARAFVSERIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEM 200

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  I  A   +  +       ++    +  +A+  A     W       V  +A++  GG
Sbjct: 201 ARRIDVARVYAHHVVERQLAGETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGG 253

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450
            GY+ E  + R YR+     I  G+   +
Sbjct: 254 MGYMAESEVERQYRDMRILGIGGGTTEIL 282


>gi|123187384|gb|ABM69268.1| GcdH [Azoarcus sp. CIB]
          Length = 395

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 139/402 (34%), Gaps = 44/402 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  +A+  ++      P++       E+ D+  F+             GL  +    
Sbjct: 24  ERMVRDSARAYSQ--ERLLPRVQEAFRH-EKTDRAIFNEMG--------ELGLLGATIPE 72

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             AR           +MS  S      +    +    + + PK+ + 
Sbjct: 73  QYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEETKQKYLPKLATG 132

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+                 GLTE   G+D  ++ ++ +K+  G        W  +SP++D
Sbjct: 133 EW-------------VGCFGLTEPNHGSDPGSMVTRARKVDGGYSLSGAKMWITNSPIAD 179

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ +       +   + +    GL    +  K+G R++ T E+     F      
Sbjct: 180 VFVVWAKDDAGD----IRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENA 235

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356
                G          L+SA   ++   +  AEA +     Y   R   G  L    +++
Sbjct: 236 FPTVRGLK---GPFTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLIQ 292

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +I        RL    DE  +  E       +  I K   C  +  +   A 
Sbjct: 293 KKLADMLTEITLGLQGCLRLGRLKDEGNAPVE-------LTSIMKRNSCGKSLDIARVAR 345

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + +GG+G  +E  IARH       +   G+ +   L +   +
Sbjct: 346 DMLGGNGISDEFCIARHLVNLEVVNTYEGTHDIHALILGRAI 387


>gi|326384231|ref|ZP_08205913.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197096|gb|EGD54288.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 386

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 129/381 (33%), Gaps = 31/381 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++    P        +   GL                          + A
Sbjct: 26  RHILPYQDEWEREGLIP--RETHLAAAELGLFGLGVPEEIGGSGGD----------LVDA 73

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS---REYDPTNKAPMQKTSVAIGLG 201
            +    L    V      +L T    H    P + +   ++       P         L 
Sbjct: 74  TILVEELHYRGVAGGVFASLFT----HGIALPHLIAAGDQDQIDKWVRPTLAGEKIGSLA 129

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE  GG+D+  + +   +  D  Y ++G K F++S +   F++ A   G  G   V  L
Sbjct: 130 ITEPSGGSDVGHLRTTAVRDGDH-YVVNGAKTFITSAVRADFVVTAVRTGGPGAAGVSLL 188

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + +    G    R  +K+G RS+ T EL F++       L+G  N     +    +    
Sbjct: 189 VIEKGTPGFEVARKLDKMGWRSSDTAELSFTDVRVPVDNLVGAENSGFAQIAQAFVTERA 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA- 377
             A  + +  +  L   + + R R   G  LI +  ++ ++ ++A  I  A   +  +  
Sbjct: 249 SLASQAYASAQRCLDLTLEWVRNRETFGKPLIARQSVQDSVTEMARRIDVARTYTRSVVE 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
                      E  +A+  A     W       V  +A++  GG GY+ E  + R YR+ 
Sbjct: 309 RRVSSGDDLIAEICFAKNTAVEAGEW-------VANKAVQLHGGMGYMRESEVERQYRDM 361

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+   +       L
Sbjct: 362 RIIGIGGGTNEILTGLAAKRL 382


>gi|284165600|ref|YP_003403879.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015255|gb|ADB61206.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 398

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 117/365 (32%), Gaps = 24/365 (6%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+      + ++S+  G +                 +                 +     
Sbjct: 53  EYRNVVEQIRKKSVEAGFYGMTMPEEVGGGDVDILTRAIVGEHMSNRPPGFHSAVFGGAG 112

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
             + + L       +++               P+    +     LTE   G+D   + ++
Sbjct: 113 GPTPILLECDDEQREEYL-------------YPLMDGEITTCFALTEPGHGSDAHYMDTR 159

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLK 276
            +K  D         +  + P +D  ++ A+  G  G    +   L D    G     + 
Sbjct: 160 AEKDGDEWLINGQKVYITNGPYADFAMVFARTSGDDGDLEGITCFLVDADNPGFEVGTIH 219

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             +G       EL F +       +LG+++              ++ A  SV   +  L 
Sbjct: 220 RAMGMTPGTHAELHFDDCRVSEDQVLGEVDQGFQSAMSWIGGGRINIAAGSVGTAQFLLD 279

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            ++ YAR R      +  +  +   +A++A DI     L    A   D  +   +E + A
Sbjct: 280 MSVDYARNRETFDEPIGHRQGVSFQLAELATDIEQVRQLYRYAAWKMDNGERARKEESMA 339

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K    ++A      AM+  GG+G++++  I R+YR +    I  G+       
Sbjct: 340 -------KLRGAELANEAADIAMQVHGGAGFMKDLPIERNYRSARVFRIFEGTDEIQKRT 392

Query: 454 VLNLL 458
           +   L
Sbjct: 393 IAREL 397


>gi|41409792|ref|NP_962628.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118462700|ref|YP_884035.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254777353|ref|ZP_05218869.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41398624|gb|AAS06244.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118163987|gb|ABK64884.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 611

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/545 (19%), Positives = 204/545 (37%), Gaps = 77/545 (14%)

Query: 34  MNAYSS---DSLL-VALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQLHAYG 88
            N +     D  L     ++  +   +E L  +        A       + N P    + 
Sbjct: 13  FNLFEVLGVDKALGQGEFSDLDADTAREMLNEISRLAEGPIADSFVE-GDRNPPV---FD 68

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P       V    ++   +   I  G      D +   V   +A  + A   +++    A
Sbjct: 69  PKTH---SVTLPESFKKSVHAVIEAGWDKVGIDEALGGVAMPKA-LLWALHEHILGANPA 124

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + +     A+++  + T    K WA     R +  T             + LTE   G
Sbjct: 125 VWMYAGGAGFANILYHLGTDEQKK-WAVMAAERGWGST-------------MVLTEPDAG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCF 256
           +D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG       +  F
Sbjct: 171 SDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLF 230

Query: 257 LVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVST 306
            VP+ L D      G  NG+    +++K+G + +AT EL F        G+L+G+++   
Sbjct: 231 FVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLVGEVHNGI 290

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             + ++     +     +++ +      A+ YA+ R                  +   P 
Sbjct: 291 AQMFEVIEQARMMVGTKAIATLSTGYLNALEYAKSRVQGADMTQMTDKTAPRVTITHHPD 350

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYARI----MAPITKYWCCKM 407
           ++R++           AL    +   D A +      +A  A      M P+ K    + 
Sbjct: 351 VRRSLMTQKAYAEGLRALYLFTSTYQDAAVAEALYGVDAELAVKVNDLMLPVVKGVGSEQ 410

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL 464
           A A + E+++  GGSG++++  I ++ R+S  +S+  G+      D      + +KG  L
Sbjct: 411 AYAKLTESLQTFGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKIVRDKGVAL 470

Query: 465 F---EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK-IALASSAAALYRA 520
               EQ+   ++ + G+   K    L        + +G+A  LT   +A      +LY+ 
Sbjct: 471 AHVSEQIQKFVDSESGNGRLKSEREL--LAKALADVQGMATALTGYLMAAQEDVTSLYKV 528

Query: 521 GMNDI 525
           G+  +
Sbjct: 529 GLGSV 533


>gi|313498363|gb|ADR59729.1| Acyl-CoA dehydrogenase domain protein [Pseudomonas putida BIRD-1]
          Length = 394

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 137/376 (36%), Gaps = 34/376 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           +  PA   +L      GL        +     +                     ++   T
Sbjct: 37  KTFPA--EMLAAMKEMGLFGLAIPEEYGGYQLRLPVFAAVMETIAAGWTTLAAFINSHCT 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
            A  ++   T    + + P + + E+                L LTE   G+D+ +IT+ 
Sbjct: 95  VAYAISKHGTEEQKRHYLPLMATGEHRG-------------ALCLTEPAAGSDLQSITTV 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQV--EGRVGCFLVPRLLEDGSPNGLCYQR 274
             +  D  + ++G K F+++      ++ LA+   +   G   +   L + S  G+  + 
Sbjct: 142 ASQD-DSDFVINGTKIFVTNGERATLLLTLARTSVDAETGRPRLSLFLVEKSFPGVTVES 200

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGM 328
             +K+      TVE+  S           V       M+ L+       +  A  +V   
Sbjct: 201 EFHKMAYTQVDTVEILLSKVKVPATAV--VGGKTGLGMRHLLDSLEVGRIAIAASAVGLA 258

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +LAEA  YA  R   G  +     ++  +AD+A  + AA  ++   A + +       
Sbjct: 259 ANALAEAKRYASERSSFGVTIDKHQAVQLRMADMATKLVAARLMTAEAARAKEAGH---- 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A +++ + K    + A  +  +A+   GG GYI E  + R YRE+P   +  G+ +
Sbjct: 315 ---RADMLSGMAKLLASESAKEICEDALRIHGGYGYINEFPVERLYREAPLYIVGEGTND 371

Query: 449 AMVLDVLNLLEKGTNL 464
              + +   +  G+ +
Sbjct: 372 IQKIVIARRIIDGSEV 387


>gi|163760525|ref|ZP_02167606.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
 gi|162282140|gb|EDQ32430.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
          Length = 404

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 127/361 (35%), Gaps = 34/361 (9%)

Query: 112 HDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL       ++        ++ + A  +  +       +   S      +    T   
Sbjct: 70  QAGLLGVTIPEAYGGSEAGYVSYGLVAREVERIDSGYRSMMSVQSSLVMYPIHAYGTEEQ 129

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ S E+                 GLTE   G+D   + ++ +K   G      
Sbjct: 130 RMKYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTRARKSDGGYVLHGS 176

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  ++P++D F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+ 
Sbjct: 177 KMWISNAPIADVFVVWAKSEAHGGE--IRGFVLEKGMKGLSAPKIGGKLSLRASITGEIV 234

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHV 344
             N         +     V  +K     L+ A   +S   +  AE   Y  R     RH 
Sbjct: 235 MDNVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCWYRARQYGLDRHQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    + ++ +AD+  +IA     S R+    DE +       +A  M  I K   
Sbjct: 291 FGKPLAGTQLYQKKLADMQTEIALGLQGSLRVGRLMDEHR-------FAPEMISIVKRNN 343

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +L   + G   
Sbjct: 344 CGKALDIARMARDMHGGNGIQAEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTGLQA 402

Query: 465 F 465
           F
Sbjct: 403 F 403


>gi|319763010|ref|YP_004126947.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825090|ref|YP_004388393.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117571|gb|ADV00060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310462|gb|AEB84877.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 389

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 140/400 (35%), Gaps = 32/400 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L   A+    +A   T     + P  +  D+ + +P  H  LR  +  G+      +++ 
Sbjct: 9   LDAEARRWQELAARLTE--SNFAPLADAIDREQRYPVEH--LRPLLESGISGMFLPKAYG 64

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                                    +M+     A  V L       +             
Sbjct: 65  GGGASLVALATVVETIAAGCGSTAAIMAALSLGAFPVLLGGNEEQKQALL---------- 114

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                + +   A+   L+E+  G+D AAIT+   +  DG        W  +   S+ FI+
Sbjct: 115 ---GGLARRGEAVNFALSERGAGSDAAAITATAVREGDGWRIRGEKCWLGNGGHSEHFIV 171

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A          +       S  G      ++K+G R   T   +    +      +   
Sbjct: 172 FALTGEPGARNNISAFWVPRSTPGAAVDFYEDKMGIRGTTTTNFKVD-VWVPRSSMVGSE 230

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++    L  L+   + V+   + +A      A  +A +R   G  +ID   +   +A
Sbjct: 231 GHGLK--LALSTLNIGRIVVAAQALGIALCSYRAAAEFATQRQTFGQAIIDHQGVGFMLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D A  ++AA  + +  A ++DE +  S   A A       K +  + A  V  +AM+ +G
Sbjct: 289 DAATSLSAARMMVYEAAKAYDEGRDVSTLGAMA-------KLFASEAAHKVCDDAMQILG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY++  ++ R YR+     I  G+     L +   +++
Sbjct: 342 GRGYVKPSAVERCYRDQRITEIYEGTSEIQRLVIARAVKR 381


>gi|160897650|ref|YP_001563232.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363234|gb|ABX34847.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 398

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 127/366 (34%), Gaps = 31/366 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      + PK+ S E+                 GLTE   G+D  +++S+  K+  G  
Sbjct: 116 TEDQKNKYLPKLASGEF-------------IGCFGLTEPDHGSDPGSMSSRAYKVDGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+ V        +   + D    GL    +  K+G R++ 
Sbjct: 163 LKGNKMWITNSPVADVFVVWAKEVTEDGHVGEIRGFILDKGMKGLSAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   + F           G          L+SA   ++   +  AE   +  R    
Sbjct: 223 TGEIVMDDVFVPEENAFPEVRGLK---GPFTCLNSARFGIAWGALGAAEFCWHTARQYTL 279

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I      + R+    DE ++  E       +  + 
Sbjct: 280 DRKQFGRPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLI 332

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  +  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   + 
Sbjct: 333 KRNNCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQT 391

Query: 461 GTNLFE 466
           G   F 
Sbjct: 392 GIAAFA 397


>gi|281354379|gb|EFB29963.1| hypothetical protein PANDA_005101 [Ailuropoda melanoleuca]
          Length = 396

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 104/279 (37%), Gaps = 21/279 (7%)

Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            P + +       K    + +  +     +TE   G+D+A I ++ ++  D         
Sbjct: 128 MPLLIAGNDQQQKKYLGRLTEEPLMCAYCVTEPVAGSDVAGIKTKAERKGDEYIINGQKM 187

Query: 233 WFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  +
Sbjct: 188 WITNGGKANWYFLLARSDLDPKAPANRAFTGFIVEADTPGVQIGRKELNMGQRCSDTRGI 247

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343
            F +         NV  G     KI +          A  +V   + +L EA  YA  R 
Sbjct: 248 VFEDVRVP---KENVLIGEGAGFKIAMQAFDKTRPPVAAGAVGLAQRALDEATKYALERK 304

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G +L++   +   +A++A+ +  A     R A   D  +  +         A I K +
Sbjct: 305 TFGKLLVEHQGISFLLAEMAMKVEIARLSYQRAAWEVDSGRRNT-------YYASIAKAF 357

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +A  +  +A++  GG+G+  E  + +  R++    +
Sbjct: 358 AADIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQV 396


>gi|108759280|ref|YP_632479.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108463160|gb|ABF88345.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 379

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 114/361 (31%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SAS 160
             L +R    G        +   +        R         ++ G + S          
Sbjct: 37  RDLWQRCGEFGFLGLPVPAAHGGLGLDTLTTARVMEALGRGCVDTGLVFSVGAHLFACVM 96

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +           + P++ S E+   N              ++E   G+D+ A+ ++  +
Sbjct: 97  PILESGDDAQKSRYLPRLCSGEWVGAN-------------AISEPEAGSDVFALKTRAVR 143

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D      G  +  + P +D F++ A  +   G   +   L +    GL   R   K+G
Sbjct: 144 DGDSYVLDGGKSYVTNGPSADVFLVYAATQPAHGYMGLSAFLVEKDTPGLSVGRAFEKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIH 337
             ++    +            L          K  +  + A      V  M   L +   
Sbjct: 204 LSTSPIAPIYLEGCRVPESARLGAEGQGAAMFKRSMQWERACLFAAYVGVMERVLEQTAD 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +AR R      L     +   +AD+   + A+  L ++     D  +        A +  
Sbjct: 264 FARTRKQFKKALGKNQAISHKLADMKQRLEASRLLLYQACWKMDRGQD-------AVMEV 316

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K    + A     +A++  GG GY+ E  I R  R++  ++I  G+       + N 
Sbjct: 317 SLAKLAISEAAIQSGLDAIQIHGGMGYVAETGIERVLRDAIPSAIFSGTSEIQRDIIANQ 376

Query: 458 L 458
           L
Sbjct: 377 L 377


>gi|163743915|ref|ZP_02151286.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161382856|gb|EDQ07254.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
          Length = 387

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 121/368 (32%), Gaps = 32/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++I  GL+ +                +   +    A           V   S + 
Sbjct: 43  REIQAKAIEAGLYAANMPEEVGGAGLDTLTWLLYEKELGRANYALHWTC---VARPSNIL 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + +       E                 L +TE   G+D+  +T+  ++  D
Sbjct: 100 LAGTEEQKEKYLYPCIRGEKWD-------------CLAMTEPGAGSDLRGMTATARQDGD 146

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               L+G K F+S    +D  I+          R     +     D    G   +     
Sbjct: 147 DF-ILNGTKHFISHADIADFAIVFMATGEEDTPRGPKKKITAFFVDKGTPGFTIRDGYRN 205

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + +R      LEF         +LG+++              L  A   +     +L  A
Sbjct: 206 VSHRGYTNAVLEFDACRLPKSAVLGEVDKGFDVANTWLGATRLQVAATCLGRAERALDHA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA  R   G  +     +   +AD+A ++ AA  L++  A  FD+      + + A++
Sbjct: 266 ISYAAERRQFGQQIGKFQGVSFKLADMATELKAANLLTWEAAWKFDQGSVTEADMSMAKL 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A        +M   V  EA++  GG G ++E  + R +R++    I  G+       + 
Sbjct: 326 KA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQRHIIS 378

Query: 456 NLLEKGTN 463
             L +   
Sbjct: 379 RELLRAQG 386


>gi|158317337|ref|YP_001509845.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158112742|gb|ABW14939.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 404

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 133/392 (33%), Gaps = 48/392 (12%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLH-----CSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              WD+ E  P    +++ +   GL+      ++W                 +       
Sbjct: 31  AAEWDEREETP--WPVIQEAAKIGLYNFDTLATLWAEE------TGLGLPLLSEELFWGD 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              G  +  +  + + +A   T     +W P+ F    DP                ++E 
Sbjct: 83  AGIGMSIMGTSLAVAGIASAGTFDQLGEWVPQCFGDAADP----------KVAAYCVSEP 132

Query: 206 RGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
             G+D++++  + +     D         W  +  +++  +++A V+  +        + 
Sbjct: 133 EAGSDVSSMRVRARYDEATDEWVINGQKAWITNGGIANVHVVVASVDPTLRGRGQAAFVV 192

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-----------------ST 306
                GL   R   K+G R++ T ++   +        L                   + 
Sbjct: 193 PPGTPGLTGNRKIKKLGLRASHTADVFLDDVRVPGRCLLGGKEKLDERLARAREGSRSAG 252

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                   +        +V   R +   A+ YAR R   G  +I    +  A+AD+ ++I
Sbjct: 253 QAALQTFEMTRPTVGAQAVGIARAAYEYALDYARHREQFGRPIITNQAVAFALADMRMEI 312

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L +R A           E  +      ++K    ++A     +A++ +GG+GY  
Sbjct: 313 DAARLLIWRAAWM------GRNERRFEAGEGSMSKLKAGEVAVWATEKAVQILGGAGYSR 366

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + R YR++   +I  G+     L V   +
Sbjct: 367 EHPVERMYRDAKIYTIFEGTSEIQRLVVARAI 398


>gi|330465036|ref|YP_004402779.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328808007|gb|AEB42179.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 404

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 134/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E  P    L++ +   GL+   +  +        +  I +  L+       
Sbjct: 29  PAAAEWDAREETP--WPLIQEAAKVGLYGFEFLATCWADPTGLSLPIASEELF-WGDAGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  + + +    TP    +W P+ F     P                 +E   G
Sbjct: 86  GLSIFGTGLAVAAIYGTGTPDQLVEWVPQCFGDVDSP----------AVAAFCSSEPEAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ A+ ++       D         +  +  ++   +++A V+  +G       +    
Sbjct: 136 SDVGAMRTRASYDEATDEWVLRGQKAYATNGGIAGVHVVVASVDPELGSRGQAAFVVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   R   K+G R++ T ++   +                                 
Sbjct: 196 TPGLSATRKLRKLGLRASHTADVFLDDVRVPGRCLLGGKEALDERLARARAGKRASGQAA 255

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+            ++   R +   A+ YA+ R   G  +I    +   +AD+ ++I AA
Sbjct: 256 MRTFELSRPTVGAQALGVARAAYEYALDYAKDRVQFGRPIITNQAVAFTLADMKMEIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R +      +  +           ++K    ++A +V  +A++ +GG+G++ +  
Sbjct: 316 RLLVWRASWMGRNNRPFTA------GEGSMSKLKAGEVAVSVTEKAVQLLGGAGFLRDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R YR++   +I  G+     L +   +
Sbjct: 370 VERWYRDAKIYTIFEGTSEIQRLVISRAI 398


>gi|126641156|ref|YP_001084140.1| acyl coenzyme A dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 311

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 25/303 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +  + T    + W PK+ + E             V   + +TE   G+D+ AI +Q  
Sbjct: 27  PYLQNIGTEEQKRYWLPKMVTGE-------------VVTAIAMTEANAGSDLQAIRTQAI 73

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             +D  Y ++G K F+S+ +    I+L A+ + +     +  LL D + +G+       K
Sbjct: 74  LENDH-YRINGSKTFISNGLHADLIVLVAKTDSQAKAKGISILLVDAALDGVKKGPSLQK 132

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG  +  T EL F +        LG+       +        L  ++M++  +  ++  +
Sbjct: 133 IGLHAQDTAELFFDDVCVLATQRLGEEGQGFAYLMQELPRERLSISMMALGAILGAIELS 192

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L      +  +A+  +   AA A   + A  + + +        +  
Sbjct: 193 KDYVLERKAFGQPLSQMQNTRFVLANAQIKAKAAQAFVDQCAALYQQHQ-------LSVT 245

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +   +   VI + ++  GG GY++E  I+R + ++    I  G+   M   V 
Sbjct: 246 QVAALKCFITDVQCEVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIMKEIVA 305

Query: 456 NLL 458
             L
Sbjct: 306 REL 308


>gi|284046203|ref|YP_003396543.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950424|gb|ADB53168.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 417

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 138/390 (35%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+       F       +  I    L+       
Sbjct: 42  PAASEWDEREETP--WPVIQEAAKIGLYGFEGLAQFFADPTGLSLPIVNEELF-WGDAGI 98

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  S  +A+ +    T     +W P+ F    DP                ++E   G
Sbjct: 99  GMAIMGSGLAAAGIFSNGTGEQIGEWIPQCFGTADDPQ----------IAAFCVSEPDAG 148

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D++A+ ++ +  S  D         W  +  +++  +++A V+  +G       +   +
Sbjct: 149 SDVSALRTRAKYDSAKDEWVLNGQKAWATNGGIANVHVIVASVDPELGSRGQASFIIPPN 208

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL       K G R++ T ++   +                         V +     
Sbjct: 209 TPGLVMGTKVRKHGLRASHTADVFLDDCRIPGSCLLGGKEKLDARLARVREGVKSRGQAA 268

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M             ++   R +   A+ YA+ R   G  +I+   +   +ADI L+I AA
Sbjct: 269 MATFEASRPTVGAQALGIARAAYEYALDYAKERRQFGRAIIENQAIAFTLADIKLEIDAA 328

Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L +R +         R+ E + +++ A     W  + A       ++ +GG+GY  E 
Sbjct: 329 RLLVWRASWMGRNQVPFRNAEGSMSKLKAGEVAVWATERA-------IQILGGNGYTREF 381

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R +R++   +I  G+     L +   +
Sbjct: 382 PVERMHRDAKIYTIFEGTSEIQRLVIARAI 411


>gi|182440104|ref|YP_001827823.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468620|dbj|BAG23140.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 408

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKIGIYSLDFYAQQFFDPTGLGIPV--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIAGVHVVVAVVDPDIGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   +        L                +    E 
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDERLARARERAKSGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+G+
Sbjct: 315 RIDAARLLVWRASWMATTGKPFTSA------EGSMSKLYASETARDVTAQAIQILGGNGF 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|84494643|ref|ZP_00993762.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384136|gb|EAQ00016.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 404

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 124/371 (33%), Gaps = 38/371 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+   +    +  +                  +    +++     A M+    T    
Sbjct: 52  EMGIFGLMIPEEYGGLGESLLTYALCVEEIARGWMSVSGIINTHFIVAYMLLQHGTEEQK 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QKISDG--IY 226
           + + P++ + E             V     ++E   G+D+AAI S+    +   D     
Sbjct: 112 QRYLPRMATGE-------------VRGAFSMSEPGLGSDVAAIKSKAIAGEGEGDDQKWT 158

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSP------NGLCYQRLKN 277
             +   W  +   S+   +L + E          +   L +  P       G+      +
Sbjct: 159 VNAQKMWLTNGGSSNLVAVLVKTELGESDSPYKNMTTFLVEKEPGFGQTAPGVTIPGKID 218

Query: 278 KIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           K+G +   T E+   N    +   L G        + D   +  ++ A  +    R +  
Sbjct: 219 KMGYKGVDTTEMVLENYETTSAQILGGAPGKGFYQMMDGVEVGRVNVAARACGLARRAFE 278

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             I YA++R   G  +     +   +AD+A  + A   +  + A   D  +    EA  A
Sbjct: 279 LGITYAQQRETFGKQIAQHQAIMFRLADMATKVEAGHQMMVKAARLKDSGERNDLEAGMA 338

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           + +A        +    V+ ++    GG GY +E  I R YRE+P   I  G+     + 
Sbjct: 339 KYLAA-------EYCADVVQQSFRIHGGYGYSKEYEIERLYREAPMLLIGEGTAEIQKMI 391

Query: 454 VLNLLEKGTNL 464
           +   L +   L
Sbjct: 392 IGRRLLEEYAL 402


>gi|126726089|ref|ZP_01741931.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126705293|gb|EBA04384.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 559

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 79/428 (18%), Positives = 151/428 (35%), Gaps = 46/428 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWH-------- 104
               L +L E   + T  E + +          +    +  +KVE +   WH        
Sbjct: 150 ARARLAVLLEEGQANTTLETSGLDEELEMVREQFRRFAQ--EKVEPYAHDWHLKDELIPM 207

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 208 EIIEELAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELIIC 267

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    ++W PK+ S E  PT                TE   G+D+ A+ ++  K  D 
Sbjct: 268 GGTEAQKENWLPKLASGEILPTAV-------------FTEPNTGSDLGALRTRAVKDGDE 314

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L + +P          G+    
Sbjct: 315 YAVTGNKTWITHAARTHVMTLLARTDAETTDYKGLSMFLAEKTPGTDEAPFPTEGMTGGE 374

Query: 275 LKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           ++  +G R     EL F N    T   L G        + +      + +A  +V   + 
Sbjct: 375 IE-VLGYRGMKEYELAFDNFKVKTDNLLGGVEGKGFKQLMETFESARIQTAARAVGVAQA 433

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  ++ YA  R   G  LI+ P +   +A +A++IA    L++  AN  D  +    EA
Sbjct: 434 TLDVSLQYALDRKQFGKSLINFPRVSGKLAMMAVEIAVTRQLTYFSANEKDAGRRCDVEA 493

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+    
Sbjct: 494 GMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRILCDARILNIFEGAAEIQ 546

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 547 AQVIARRL 554


>gi|159035815|ref|YP_001535068.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157914650|gb|ABV96077.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 404

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 136/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E  P    +++ +   GL+   +  +        +  I    L+       
Sbjct: 29  PAAAEWDAREETP--WPIIQEAAKVGLYGFEFLTTCWGDPSGLSLPIACEELF-WGDSGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  + + +    TP    +W P+ F     PT                +E   G
Sbjct: 86  GLSIFGTGLAVAAIYGSGTPEQLLEWVPQCFGDLDSPT----------VAAFCTSEPEAG 135

Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ AI ++      +D         +  +  ++   ++ A V+  +G       +    
Sbjct: 136 SDVGAIRTRAVYDQATDEWVLNGQKAYATNGGIAGVHVVTASVDPELGSRGQAAFVVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---------------D 311
             GL   R   K+G R++ T ++   +        L       E                
Sbjct: 196 TAGLTATRKLRKLGLRASHTADVFLDDVRLPGRCLLGGKEALDERLARARSGQRAASQAA 255

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+            ++   R +   A+ YA+ R   G  +I+   +   +AD+ ++I AA
Sbjct: 256 MRTFELSRPTVGAQALGVARAAYEYALDYAKERVQFGRPIIENQAVAFTLADMKMEIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R +      +  +           ++K    ++A  V  +A++ +GG+G++ +  
Sbjct: 316 RLLVWRASWMGRNNRPFTA------GEGSMSKLKAGEVAVTVTEKAVQLLGGAGFLRDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R YR++   +I  G+     L +   +
Sbjct: 370 VERWYRDAKIYTIFEGTSEIQRLVIARAV 398


>gi|327191532|gb|EGE58547.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 386

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 101/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CEGEQRERYLLPAVRGEKIDALAITEPDAGSDMRGMKCAARRDG-GDFVLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          V       L D    G    +  + + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGVKKKITAFLVDRGTPGFEILKGYDSVSHRGYHNCTLSFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R     A+ YA  R   G  + 
Sbjct: 220 CRIPEAQVLGEVHRGFDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERRQFGKPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D   S       A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAAEWLTLAAAWRIDVGLS-------ADRQIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|313679494|ref|YP_004057233.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152209|gb|ADR36060.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 535

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/463 (22%), Positives = 186/463 (40%), Gaps = 41/463 (8%)

Query: 33  GMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N Y  D  L A++A+F         EL   G ++     +    +     P L  +  
Sbjct: 9   GKNHYLEDPDLRAVLAHFWPEARDREAELADWGAFMGREVYEAAYHVDQGAEPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P    +L R                P     +     A  YL+A     
Sbjct: 69  DGRRVDRVRLAPVQRQVLERLR----------PIVRPPYEGGSWHHHFALGYLLADPGLY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +   A  +           +AP +    +       +          +TE +GG+
Sbjct: 119 CILTITHQVAYPLH---------KYAPDL--GAWKER----VLYGDAWGATWMTEIQGGS 163

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLL 262
           D+ A  +  ++        +G K+F S   ++D  +  A+ EG       +  FLVPRL 
Sbjct: 164 DLGANRTVARREGGVWRLFAGDKYFASGAGLADVAVATARPEGAPAGPKGLALFLVPRLR 223

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DG+ N    +RLK K G R+  + E+E   +  +L+G          +   +  L +A+
Sbjct: 224 ADGTLN-FTVRRLKVKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLANAV 282

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     ++ E     +RR   G  L   P+++  + ++A+  A   AL+F   ++FD 
Sbjct: 283 AAMGIAGKAILEVRERVQRREAFGRPLAAWPLVRHDLLELAVRQAGGLALAFAAVDAFDR 342

Query: 383 AK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A       +E   +AR ++ + K      A A+   AME  GG G++EE ++AR +RE+ 
Sbjct: 343 AWADRPPYTERYHFARFLSHLAKNRTADHAAAITRLAMELFGGLGFLEEYAVARWHREAL 402

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
              I  G  N   LD+L  ++K     E   + LE+ L    +
Sbjct: 403 ITPIWEGPSNVQALDLLEAMQK-KRAHEPFLAWLEERLARRSE 444


>gi|158425182|ref|YP_001526474.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158332071|dbj|BAF89556.1| glutaryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 405

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 118/368 (32%), Gaps = 31/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
             ++      GL       ++            AAR            MS  S      +
Sbjct: 63  REIMSEMGELGLLGVTIPENYGGAGLGYVSYGLAAREVERVDSGYRSAMSVQSSLVMHPI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ + E+                 GLTE   G+D A + ++ +KI 
Sbjct: 123 YAYGDESQRKKYLPKLATGEW-------------VGCFGLTEPDAGSDPAGMRTRAEKID 169

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D  ++ A+         +   + +    G    +++ K+  R
Sbjct: 170 GGYRLTGAKMWITNSPIADIAVVWAKSAAHGDA--IRGFIVERGMKGFSTPKIEKKLSLR 227

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T E+         + + N+             L+ A   +    +  AEA       
Sbjct: 228 ASITGEIVLEGV---EIPEENLLPNVSGLKGPFGCLNRARYGIGWGVLGAAEACLEAARQ 284

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD++ DIA       R    FDE +        A    
Sbjct: 285 YTLDRKQFGRPLAQTQLVQKKLADMSTDIAFGLQACLRAGRLFDEGQ-------LAPETI 337

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +   
Sbjct: 338 SYIKRNNCGKALDIARVARDMHGGNGISAEFHVIRHAANLETVNTYEGTHDIHALIIGRA 397

Query: 458 LEKGTNLF 465
           +      F
Sbjct: 398 ITGLQAFF 405


>gi|312196625|ref|YP_004016686.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311227961|gb|ADP80816.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 383

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 136/378 (35%), Gaps = 35/378 (9%)

Query: 95  DKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQL 146
           D V  +P W         + RR    G+        +    +    + +        A +
Sbjct: 24  DVVPVYPEWEAAGVPPKEVFRRLGELGIMGMNMPEEWGGGGQGDYVYNVVLQEETARAGV 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G L +                    W P I S E             +   + LTE  
Sbjct: 84  TIGPLRTHLDVILPYFRRYCDAAQRDRWFPGISSGE-------------LMTAIALTEPD 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLE 263
            G+D+AA+ +  ++  D  Y L+G K +++   ++D  I+L +   +       +  L+ 
Sbjct: 131 TGSDLAAVRTAARREGDH-YVLNGAKTYITGGSLADLVIVLCRTSTDPANRRDGLTLLVV 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS---TGPVEDMKILIYLDS 320
           +    G    R   KIG ++  TVEL F++    +   L  +    G +        L  
Sbjct: 190 EDGMPGFVKGRKLEKIGLKAQDTVELSFTDVVVPVANRLGEADQAFGYLGANLPQERLAI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ SV+  R +L   + Y   RH+ G  +      K  +A ++ +I A  A         
Sbjct: 250 AVGSVAQARAALDLTVEYVMSRHIFGRPVSGFQNTKFELAAMSTEIEAGQAF-------L 302

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    +    + +   A   K +C ++   V+   ++  GG GYI E  IAR Y ++   
Sbjct: 303 DRGIEQLVAGSLSPADAARVKLFCTELQGRVVDRCLQLFGGFGYITESPIARLYADARVT 362

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  G+   M   +   L
Sbjct: 363 RIYGGTSEVMKSIISKSL 380


>gi|254392952|ref|ZP_05008118.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294817832|ref|ZP_06776474.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326446700|ref|ZP_08221434.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197706605|gb|EDY52417.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294322647|gb|EFG04782.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 380

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 138/373 (36%), Gaps = 24/373 (6%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             ER     F      L++RS   G+    +D  +  + +        + L  M  LE  
Sbjct: 26  HAERDAAAVFPREQWKLVQRS---GILGLPFDERWGGLGQ--------SLLTTMYVLEEL 74

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                    A  VA   T         +  S          +          +TE   G+
Sbjct: 75  GAGCRDGGLAFSVATHLTG--VGVPLERFGSHTLKQRFLPGVCSGGTIGAHAITESGSGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A+ +   + +DG + L G K F+S+  ++D F++ A+     G F +   + + +  
Sbjct: 133 DALAMRTTATRDADGGFVLRGSKSFVSNGPVADVFVVYARTHPDGGPFGISAFVVERNTP 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL       K+G R++   EL F +       +LG +      ++ +     L + I+S 
Sbjct: 193 GLTVGAPVGKMGLRTSPLSELHFDDCRIPASAVLGRVGSGFLILDHVMKWEILLAFIIST 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  L   + YA+ R   G  +     +   I D+ + +  +    +  A      ++
Sbjct: 253 GQMRYRLDRCVEYAKERTQFGQAIGSYQAISHRIVDMKIGLETSRKWLYDTAVRMTAGEN 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + +         I+K    + A A    A++  GGSGY+ E  + +  R++ A  I  G
Sbjct: 313 VTTD-------ISISKVIASESALASAQAAVQIFGGSGYLTECGLEKDLRDAVAGPIYSG 365

Query: 446 SGNAMVLDVLNLL 458
           +       V ++L
Sbjct: 366 TSEIQRNRVASML 378


>gi|118616886|ref|YP_905218.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99]
 gi|118568996|gb|ABL03747.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99]
          Length = 621

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 98/522 (18%), Positives = 195/522 (37%), Gaps = 72/522 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
               + L  +        A       + N P    + P       V    ++   +R  I
Sbjct: 46  DTAREMLTEISRLAEGPVAASFIE-GDRNPPV---FDPKTH---TVTLPESFKDSVRAVI 98

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G   +  D     +   +A  + A   +L+    A  + S     A ++  + T    
Sbjct: 99  EAGWDKAGLDEELGGMPMPRA-LMGALHEHLLGANPAVWMYSGGAGFAQIMYHLGTEEQK 157

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 158 K-WAVMASERGWGST-------------MVLTEPDAGSDVGAGRTKAVEQADGSWHIDGV 203

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
           K F++S  SD        ++LA+ EG       +  F VP+ L D      G  NG+   
Sbjct: 204 KRFITSGDSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFVT 263

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL          G+L+G+++     + ++     +     +++ + 
Sbjct: 264 NVEHKMGLKVSATCELSLGQHGVPAKGWLIGEVHEGIAQMFEVIEQARMMVGTKAIATLS 323

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 324 TGYLNALEYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 383

Query: 378 NSFDEA---KSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A    +   +A  A      + P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 384 TFQDAAVAEAAHGVDAKLAVKINDLLLPVVKGVGSEQAYANLTESLQTLGGSGFLQDYPI 443

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVI 484
            ++ R++  +S+  G+      D      + +KG  L     Q+   ++ + G+   K  
Sbjct: 444 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQEFVDSETGNGRLKTE 503

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAA-ALYRAGMNDI 525
             L        + + +A  LT  +  A     +LY+ G+  +
Sbjct: 504 RAL--LAKALTDVQAMAATLTGYLMAAQQDINSLYKVGLGSV 543


>gi|254512802|ref|ZP_05124868.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221532801|gb|EEE35796.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 386

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 101/287 (35%), Gaps = 16/287 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-S 240
           +       P  +      L +TE   G+D+  +  Q  +  D     +G K F+S    +
Sbjct: 104 DQRERYLLPAVRGEKMDALAMTEPDAGSDVRGMKCQAMRDGDDWVV-NGSKHFISGAEHA 162

Query: 241 DAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
           D FI+          +     +   L D    G   +   N + ++      L F N   
Sbjct: 163 DFFIVFIATGVDETPKGPKKRITTFLVDRGTPGFELREGYNSVSHKGYKNYILYFDNCRL 222

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG+++     + +      L  A  SV   R     A++YA  R   G  +    
Sbjct: 223 PDAQVLGEVDGGFAVMNEWLYATRLTVAAFSVGRARRCFDYALNYAAERKQFGQPIGKFQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   IAD+  +I AA  L+   A   DE    + E           K +  +M   V  
Sbjct: 283 GVGFQIADMITEIDAADWLTLSAAWRLDENLPSNRE-------IASAKLYASEMLARVTD 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 336 TTLQIYGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|221369193|ref|YP_002520289.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
 gi|221162245|gb|ACM03216.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 377

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 140/355 (39%), Gaps = 21/355 (5%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           I   +   + +  F  +   +      A  Y+   L    + +     ++++++   P  
Sbjct: 36  IEPAVLSQMGELGFFGMTVPEEMGGVGAD-YVSYALALIEIAAGDGAVSTVMSVHNAP-- 92

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S         P  + +      LTE   G+D +A+ S+ ++   G Y + G
Sbjct: 93  FNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAG-GDYVIDG 151

Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F++S  ++   I+ A++EG  G   +   L      G    ++++K+G  ++ T  L
Sbjct: 152 EKVFITSGRLAGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCAL 211

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL-----AEAIHYARRRH 343
            F +        +       E  +I L  L++  + ++   V +       A+ YAR R 
Sbjct: 212 RFDSLRVPEALRIG---AEGEGYRIALSSLETGRIGIAAQSVGMAQAALEAAVAYARERT 268

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI+   +   +A+    + AA  +    A   D  +    EAA A       K +
Sbjct: 269 SFGRSLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMA-------KLF 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A  ++++A++  GG GY  +  + R YR+     I  G+ +   + +L  +
Sbjct: 322 ASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGM 376


>gi|326780773|ref|ZP_08240038.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326661106|gb|EGE45952.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 408

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQFFDPTGLGIPV--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIAGVHVVVAVVDPDIGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   +        L                +    E 
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDERLARARERAKSGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+G+
Sbjct: 315 RIDAARLLVWRASWMATTGKPFTSA------EGSMSKLYASETARDVTAQAIQILGGNGF 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|226305242|ref|YP_002765200.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226184357|dbj|BAH32461.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 382

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 133/383 (34%), Gaps = 36/383 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  +   GE        P    L R++   GL  +    S           I      
Sbjct: 26  PHLTQWERDGE-------IP--RELHRKAGALGLLGASAPESAGGEGGDAVDSIVICEEM 76

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A    G   S      ++  L+        + W               P  +      
Sbjct: 77  HQAGASGGLFASLFTCGIAVPHLIAAGDEAQIEKWVK-------------PTLRGDKIGS 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGDH-YVVNGAKTFITSGVRADFVVTAVRTGGPGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ +    G    R   K+G R++ T EL F +       L+G  N     +    +  
Sbjct: 183 LLVIEKGTPGFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + +     L   + + R R   G  LI +  ++  + ++A  I  A   +  +
Sbjct: 243 RVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHSV 302

Query: 377 ANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +         E  +A+  A  T  W       V  +A++  GG GY++E  + R YR
Sbjct: 303 IERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           +     I  G+   +       L
Sbjct: 356 DMRILGIGGGTTEILTGLAAKRL 378


>gi|322492910|emb|CBZ28190.1| putative isovaleryl-coA dehydrogenase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 410

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 75/350 (21%), Positives = 139/350 (39%), Gaps = 39/350 (11%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L           ++ S+   +      +P     W PK+ 
Sbjct: 88  PEADGGAGMDAVAAVIVHHELSKYDPGFCLAYLAHSMLFVNNFYYSASPAQRARWLPKVL 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  +    +K S+G Y L+G K ++++  
Sbjct: 148 TGEH-------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGNYVLNGSKIWITNGT 194

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D F++ A+V+G++  F V R        G       +K G R++   +L F +     
Sbjct: 195 VADVFLIYAKVDGKITAFAVER-----GMKGFTQGPKIDKCGMRASHMCQLFFEDVVVPA 249

Query: 299 LGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L      +  M     L  +  A M+V     S+     YA  R   G  + +   +
Sbjct: 250 ENLLGEEGKGMVGMMRNLELERVTLAAMAVGIAERSVELMTSYASERKAFGQSISNFGQI 309

Query: 356 KRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +R IA+   D  AA AL + ++++   D       +AA         K +   +A  V  
Sbjct: 310 QRYIAEGYADTEAAKALVYSVSHNVHPDNKNRLGSDAA---------KLFATPIAKKVAD 360

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            A++ +GG GY +   + R +R++    I  G+  A   ++   L KG N
Sbjct: 361 SAIQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAHHKNITKDLLKGHN 410


>gi|253699199|ref|YP_003020388.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251774049|gb|ACT16630.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 381

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 117/358 (32%), Gaps = 26/358 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VA 163
             +    G+      + +  +       I        A L++G L S +    +    + 
Sbjct: 42  WEKCAEFGIPGITMPQEYGGLGLDTMTSIATMEGLGYACLDSGLLFSLNSHVWTCESPIN 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + +  + + P + +              S+  G  +TE   G+D  ++  + +K  D
Sbjct: 102 RFGSEKQKRRYLPGLIAG-------------SLRGGHAMTEPDAGSDAFSMRCRAEKRGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++P++D  ++ A      G   V   + +    G    +    +G R+
Sbjct: 149 RYILNGSKTFITNAPIADLLLVFAVTCREKGFAGVSAFIVERGFPGFSTGQPLETMGLRT 208

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHYAR 340
               E+            L             +  + +      +  M   L + + YA+
Sbjct: 209 CPLGEVFLEECEVPEENRLGQEGSGAAIFNSEMEWERSCLFAAHLGAMDKILEDCVAYAK 268

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   IAD+ + I  +  +  ++A+   + K    E+A A       
Sbjct: 269 ERQQFGKAIGKCQSISHKIADMKVRIELSRLMLHQVASLKGQGKRAPLESAMA------- 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  +       +A++  G  GY  E    R+ R++ A  I  G+       +   L
Sbjct: 322 KLFISESYVQNSTDALQIHGAYGYSSEYDFERNLRDAIAGKIYSGTSEIQRNIIATFL 379


>gi|302501721|ref|XP_003012852.1| thermophilic desulfurizing enzyme family protein [Arthroderma
           benhamiae CBS 112371]
 gi|291176413|gb|EFE32212.1| thermophilic desulfurizing enzyme family protein [Arthroderma
           benhamiae CBS 112371]
          Length = 359

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 115/320 (35%), Gaps = 24/320 (7%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAH 133
             A    P+         R D+    P    + ++    G      +  +  +    QAH
Sbjct: 59  EFAKREIPE-----EVAARTDEQNQFP--PEMWKKFGEAGFLGVTAEEKYGGLGMGYQAH 111

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +    L   +        + S    + + L  +P   + + P + S E           
Sbjct: 112 CVVMEELSRASGSIGLSYAAHSQLCVNQLCLNGSPEQKERFLPGLISGE----------- 160

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 L ++E   G+D+ ++ ++ + +  G        W  + P +D  ++ A+ E   
Sbjct: 161 --KIGALAMSEHSAGSDVVSMKTKAKAVDGGFVLNGTKMWITNGPDADFIVVYAKTEPDA 218

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
           G   +   + + +  G    R  +K+G R + T EL F +       +LG LN     + 
Sbjct: 219 GSKGITAFVVEKNFKGFSCARKLDKLGMRGSNTGELIFEDVFVPHANVLGQLNKGVRVLM 278

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +   L  L  +   +  M+  L   + Y   R   G  +    +++  +AD+   +AA+ 
Sbjct: 279 EGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGMPIAHNQLIQGKLADMYTKLAASR 338

Query: 371 ALSFRLANSFDEAKSRSEEA 390
           A ++  A   D++    + A
Sbjct: 339 AFTYNTARQVDQSAVSPDGA 358


>gi|71906179|ref|YP_283766.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
 gi|71845800|gb|AAZ45296.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas
           aromatica RCB]
          Length = 391

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 132/388 (34%), Gaps = 39/388 (10%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYL 142
           L        R       PA    +      GL        +        ++ + A  +  
Sbjct: 37  LAPRIRDAFR--NETTDPAIFREMG---DMGLLGPTLPPQYGGAGLNYVSYGLIAREIER 91

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +       L   S      +    +    + + PK+   E+                 GL
Sbjct: 92  VDSAYRTLLSVQSSLVMLPIYAFGSEEQKQKYLPKLGKGEW-------------IGCFGL 138

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D  ++ ++ + +  G        W  S+P++D F++ A+ +  V    +   +
Sbjct: 139 TEPNSGSDPGSLATRARTVPGGWKLSGSKNWISSAPIADVFVVWAKDDDGV----IRGFI 194

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            D    GL    +  K+G R+  T E+     F     + N+  G          L+SA 
Sbjct: 195 LDKGMPGLSAPVIHGKVGMRAAITGEIVMDEVFVP---NENLLPGVSGLKGPFTCLNSAR 251

Query: 323 MSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             ++   +  AEA  +  R     R      L    ++++ +AD+  +I      + RL 
Sbjct: 252 YGIAWGALGAAEACWHTARQYTLDRKQFDKPLAANQLIQKKLADMQTEITLGIQGALRLG 311

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+  +  E       +  + K   C  A  +   A + +GG+G  ++  + RH    
Sbjct: 312 RMMDDGSATPE-------IVSMMKRNSCGKALDIARTARDMLGGNGISDDFGVIRHLVNL 364

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLF 465
              +   G+ +   L +L   + G + F
Sbjct: 365 EVVNTYEGTHDVHAL-ILGRAQTGISAF 391


>gi|304320145|ref|YP_003853788.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303299048|gb|ADM08647.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 591

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 85/482 (17%), Positives = 167/482 (34%), Gaps = 52/482 (10%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWDKVEFHPAWHALLRRSI 111
            H   + L    +         +A    P        P   R  KV+  P   +      
Sbjct: 22  AHPRFDALDRSAIEGFLDAADHIAETAEPLAARLDETPPTYRDGKVDMLPEAQSAFDALR 81

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL       ++  +   +      A +   A +        ++ +A ++    T    
Sbjct: 82  EAGLIGGPLPETYGGLGLPETVHQALAFVLSAANIGLTAHGMLTLGAARLIESFGTTAQK 141

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P             P+ +      + L+E   G+ +A IT++     DG Y + G 
Sbjct: 142 EKYLP-------------PLAEGRFTGTMCLSEPHAGSSLADITTKAIPQEDGSYKIIGR 188

Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275
           K ++S    +       ++LA++ G       +  F+VP+   D     G  N +    L
Sbjct: 189 KMWISGGDHELSENIIHLLLAKIPGGPEGIKGISLFIVPKKRVDDEGGVGERNDVALAGL 248

Query: 276 KNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +K+G +      L F       G L+G+ +     +  M     +   + + +  +   
Sbjct: 249 NHKMGYKGITNCALNFGENEACIGELVGEPHNGLRYMFQMMNEARVAVGLGAAALGQSGY 308

Query: 333 AEAIHYARRRHV----------SGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++ YA+ R            SG   +I+   ++R +      +  A AL    A   D
Sbjct: 309 QASLAYAKERPQGRHPDEKTPGSGQIPIIEHADIRRLLLAQKAAVEPALALGLFCAILLD 368

Query: 382 EAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +   E    +A     + PI K W  +        A++ +GG+GY ++  + R YR++
Sbjct: 369 RIELGEETAETDALLLDFLTPIAKSWPSEFCLEANKHAIQVLGGAGYTKDYPVERLYRDN 428

Query: 438 PANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLC 494
             N I  G+      D+L      KG    +   + +  DL   +  K I   ++S+   
Sbjct: 429 RLNPIHEGTHGIQGQDLLGRKVTIKGGAAAQAFVAAVTADLKRPTDDKDIAAFQESLKQA 488

Query: 495 KE 496
            +
Sbjct: 489 LD 490


>gi|229489143|ref|ZP_04383009.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324647|gb|EEN90402.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 391

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 26/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            + +++   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 42  DIRKKAAAIGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W  +I S               V     LTE   G++ A + ++      
Sbjct: 102 GFGTDEQKAQWLERIASG-------------DVVASFALTEPGAGSNPAGLRTKAVLDGS 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++  F++ A+          +   L      G+       K+G  
Sbjct: 149 DWVIDGNKRFITNAPLAQLFVVFARTRPADSDGPGIAVFLVPADTPGVTVGPKDKKMGQE 208

Query: 283 SNATVELEFSNTFGFLLGDLNVST--GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
              T E+ F N        +      G    M  L    +  A +SV   + +L E++ +
Sbjct: 209 GAWTSEVTFDNVRVPESALVGGDQDTGYRAAMTSLARGRVHIAALSVGAAQRALDESVAF 268

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +      G  + D  +++  +AD    + A  A+   +A  +   + R       R+   
Sbjct: 269 SVVTEQGGTAIGDFQLVQAMLADQQAGVMAGRAMVREVAARYVSGEDR-------RLGPS 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +M   V   A++  GG+GY+    + R YRE     +  G+     L +   L
Sbjct: 322 AAKLFCTEMVGKVADLAVQIHGGNGYMRGVPVERIYREVRLLRLYEGTSEIQRLILGGGL 381


>gi|254472292|ref|ZP_05085692.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211958575|gb|EEA93775.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 399

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 126/361 (34%), Gaps = 34/361 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +        A+ + A  +  +       +   S      +    +   
Sbjct: 65  EQGLLGVTLPEQYGGSAASYVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSEEQ 124

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ S EY                 GLTE   G+D A + ++  K   G      
Sbjct: 125 RMKYLPKLASGEY-------------VGCFGLTEPDAGSDPAGMRTRAVKTESGYRITGS 171

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+ E       +   + +    GL   +++ K+  R++ T E+ 
Sbjct: 172 KMWISNSPIADVFVVWAKSEAHD--NQIRGFVLEKGMEGLSAPKIEGKLSLRASITGEIV 229

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
             N         +     V  +K     L+ A   +S   +  AE     A  Y   R  
Sbjct: 230 MDNVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCWMRARQYGMDRKQ 285

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L    + ++ +AD+  +I+     S R+   FDE +        A  M  I K   
Sbjct: 286 FNRPLAQTQLFQKKLADMQTEISLGLQASLRVGRLFDEGRV-------APEMISIVKRNN 338

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +  +A +  GG+G  EE  + RH +     +   G+ +   L +L   + G   
Sbjct: 339 CGKALDIARQARDMHGGNGISEEFMVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTGLQA 397

Query: 465 F 465
           F
Sbjct: 398 F 398


>gi|323449016|gb|EGB04908.1| hypothetical protein AURANDRAFT_59443 [Aureococcus anophagefferens]
          Length = 628

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 88/454 (19%), Positives = 164/454 (36%), Gaps = 59/454 (12%)

Query: 43  LVALIA--NFPSVVHKELELLGEYVLSCTAQELARMAN----YNTPQLHAYGPGGERWDK 96
           L AL+A   F     + +E + E   S  A+E+   AN       P    Y       D 
Sbjct: 49  LQALLATERFRDHDVETIESIVE-AGSTLAEEVFYDANPVGDREAP---TYDADA---DV 101

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V    A     ++    G      ++    +         A   + +A          + 
Sbjct: 102 VVHPAAVVDAQKQYAEGGFIGMTLEQDKGGLGLPVCAAALANLPFSVANTGLMSYHGVTN 161

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            S +++A   +P     W PK+ S E   T             + L+E   G+ +  + +
Sbjct: 162 GSITLLAAHGSPEQQATWLPKLTSGEAYGT-------------MCLSESHAGSSLTDLRT 208

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDG 265
                 DG Y + G+K +++             +LA++ G       +  FLVP++LE+G
Sbjct: 209 SAAPNGDGSYAIKGNKMWITGGDQGLSENIVHFVLAKLPGAPPGVKGISLFLVPKVLENG 268

Query: 266 SPNGLCYQRLKNKIGNRSNATV-ELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           + N +    + +K+G  ++    EL F +      G+L+G+ +     +  M   + +  
Sbjct: 269 ARNDVYLGGMNHKMGQIASVNAGELLFGDRTGAATGYLVGEPHEGLKCMFVMMNELRVGV 328

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAA 369
            + + +        A+ YAR R                 ++    +KR +          
Sbjct: 329 GMGAAASGVAGYTAALRYARDRAQGRPLTSKDPAAPMVPIVQHADVKRMLLAARAYSEGG 388

Query: 370 TALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            ALS   A   D+     + AA         ++ P+ K W  +        A++  GG+G
Sbjct: 389 VALSLYGAELIDKMAVCEDAAAKQELHLVLELLIPMIKSWPSEWGLEANRLAIQVHGGAG 448

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           Y  +  + + YR++  NSI  G+     LD+L  
Sbjct: 449 YTTDFIVEQLYRDARVNSIYEGTTGIQSLDLLGR 482


>gi|73544305|ref|XP_848047.1| isovaleryl-coA dehydrogenase [Leishmania major strain Friedlin]
 gi|321438401|emb|CBZ12155.1| putative isovaleryl-coA dehydrogenase [Leishmania major strain
           Friedlin]
          Length = 410

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 72/347 (20%), Positives = 137/347 (39%), Gaps = 39/347 (11%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L           ++ S+   +      +P     W PK+ 
Sbjct: 88  PEADGGAGMDAVAAVIIHHELSKYDPGFCLAYLAHSMLFVNNFYYSASPEQRARWLPKVL 147

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  +    +K S+G Y L+G K ++++  
Sbjct: 148 TGEH-------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGNYVLNGSKIWITNGS 194

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D F++ A+V+G++  F V R        G       +K G R++   +L   +     
Sbjct: 195 VADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRASHMCQLFLEDVVVPA 249

Query: 299 LGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L      +  M     L  +  A M+V     S+     YA  R+  G  + +   +
Sbjct: 250 ENLLGEEGKGMVGMMRNLELERVTLAAMAVGIAERSVELMTSYASERNAFGQPISNFGQI 309

Query: 356 KRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +R IA+   D  AA AL + ++++   D       +AA         K +   +A  V  
Sbjct: 310 QRYIAEGYADTEAAKALVYSVSHNVHPDNKNRLGSDAA---------KLFATPIAKKVAD 360

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A++ +GG GY +   + R +R++    I  G+  A   ++   L K
Sbjct: 361 SAIQVMGGMGYSKGMPVERLWRDAKLLEIGGGTIEAHHKNITKDLLK 407


>gi|254460173|ref|ZP_05073589.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206676762|gb|EDZ41249.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 407

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 129/368 (35%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     +  +         AAR           +MS  S      + 
Sbjct: 66  EIFREMGEMGLLGTTIPEEYGGLGAGYVSYGLAAREVERVDSGYRSMMSVQSSLVMYPIY 125

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + PK+ S E             +    GLTE   G+D   + ++  K + 
Sbjct: 126 AYGSEAQRKKYLPKLASGE-------------LIGCFGLTEPDAGSDPGGMKTRAVKTAT 172

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E   G   +   + +    GL   ++ NK+  R+
Sbjct: 173 GYKITGSKMWISNSPIADVFVVWAKSEEHGGK--IRGFVLEKGMTGLSAPKIGNKLSLRA 230

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+   N         +     V+ +K     L+ A   +S   +  AE   +  R 
Sbjct: 231 SITGEIVMDNVEV----GEDALLPNVQGLKGPFGCLNRARYGISWGVMGAAEFCWHGARQ 286

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    + ++ +AD+  +IA     S ++    D A +       A  M 
Sbjct: 287 YGLDRKQFGKPLAQTQLFQKKLADMQTEIALGLQASLQVGRLMDAANA-------APEMI 339

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   + +  GG+G   E  + RH       +   G+ +   L +L  
Sbjct: 340 SIVKRNNCGKALDIARMSRDMHGGNGISAEFGVIRHMVNLETVNTYEGTHDVHAL-ILGR 398

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 399 AQTGLQAF 406


>gi|70730080|ref|YP_259819.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68344379|gb|AAY91985.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 386

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 113/358 (31%), Gaps = 28/358 (7%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF- 179
           D     +  +   K  AA  Y     E          S +++           WA  +F 
Sbjct: 35  DEVSADLAGEIRSKAIAAGFYAFNMPEEVGGGGLDYLSQALIER---ELAKCSWALHVFV 91

Query: 180 ----------SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
                     +         P  +        LTE   G+D  AI ++  +         
Sbjct: 92  ARPSKILMACTGSQIGDYLLPCVQGRKVDCFALTEPGAGSDANAIKTRAVRDGGDFVLNG 151

Query: 230 GHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
              +   +  +D  I+ A              V   L D    GL  +R    + NR   
Sbjct: 152 SKHFISHAGHADFAIVFAVTGTYEHNGRQRNAVTSFLVDRDTPGLTIRRGPKCVSNRGYH 211

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T E+ F +       +LG++               +  A   V   + +L  ++ +A  R
Sbjct: 212 TFEMFFDDCRVPASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDASLQWAADR 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     +   +AD+A  I AA  L+   A   D+        +     A + K 
Sbjct: 272 KQFGQAIGSYQGVSFKLADMATQIRAAELLTLHTAWKMDQG-------SMTDGEAGMAKL 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++   V  EA++  GG G ++E  + R +R +    I  G+       +   L +
Sbjct: 325 FASEVLGRVADEAVQIYGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIISRELLR 382


>gi|295394632|ref|ZP_06804851.1| Isovaleryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972525|gb|EFG48381.1| Isovaleryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 397

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 126/378 (33%), Gaps = 27/378 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--L 142
               P  + W++         L + +   GL    +D  +       A+ +  A      
Sbjct: 37  REINPHVDEWERTGMDS--RKLWKSAGDLGLLGLTYDPKYGGGGASLAYSMVLAEELGKA 94

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A      L + +  +   +  + TP   + +     S E                 +G+
Sbjct: 95  DAAGVGLGLTAHANMATPTLNQLGTPEQKEKYLRPAISGE-------------AIASIGV 141

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D+AAI +  ++  D         +  ++  +D   ML +     G   + +++
Sbjct: 142 TEPDAGSDVAAIRTTAKRDGDHWVINGQKTFITNASHADWVCMLVRTSDEPGYRGMSQII 201

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
                +G    R+ +K+GNR + T EL  ++    +   +     G  + M       L 
Sbjct: 202 VPTDTSGFEVTRVLDKLGNRCSDTCELRLTDVRVPVANTIGQEGRGFQQQMLQFLIERLS 261

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
                +     +L     Y R R V G  L         I ++  +I             
Sbjct: 262 GTASMIGSCDRALERTREYMRTRKVFGRSLAQCQYPAFRITELQAEIEILRESLHGAVQR 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +  +  +        +    K    +++  V    ++  GG GY+EE   AR  R+S  
Sbjct: 322 VERGEDVTR-------LTSAAKLKAGRLSREVADYVVQVHGGMGYMEENWTARFMRDSRL 374

Query: 440 NSILLGSGNAMVLDVLNL 457
            SI  G+   M+  +  L
Sbjct: 375 TSIGGGADEVMLQVLAKL 392


>gi|13542136|ref|NP_111824.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325567|dbj|BAB60470.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 369

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 35/308 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  ++F+                 +GL +TE  GG+D+A I +   K
Sbjct: 87  VIALFGNDEQKKKYLSRVFAG-------------KAKMGLAVTEPGGGSDVANIKTTAVK 133

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y L+G K F+++   +D F++LA+  + +     +   + +    G    ++K K
Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSQEKKKHHGMSVFIVERDFEGFRSNKIKGK 192

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +G R+  T EL   N        +           I+ + D +   V+   + +AE I  
Sbjct: 193 LGVRATDTAELTLENVKVPEENLVGEPGRGFYY--IMTFFDISRAYVAAQALGIAEGIL- 249

Query: 339 ARRRH----VSGGILIDQP-VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
              R        G L  QP  ++  IAD+A  I A   L++  A+               
Sbjct: 250 --ERTLSILQKDGPLTSQPERVQFTIADMATRIEATKLLTYEAASYIFNFNPNPA----- 302

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             +  + K +  + A  V  +AME  G  G     SI R +R++    I  G+     L 
Sbjct: 303 --VTSMAKAYAAETAVYVSRKAMEVTGIDGLT--SSIERSFRDAKIMEIWEGTSEIEKLV 358

Query: 454 VLNLLEKG 461
           +  +L+ G
Sbjct: 359 IARMLKTG 366


>gi|88801128|ref|ZP_01116673.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
 gi|88776109|gb|EAR07339.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297]
          Length = 391

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 121/358 (33%), Gaps = 28/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
              +R+    GL  +     +             AR            MS  S      +
Sbjct: 52  RDWMRQMGEQGLLGATLPEKYGCAGLNHVSYGLIAREVEHVDSGFRSAMSVQSSLVMYPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + PK+ S E+                 GLTE   G+D A++ ++ + + 
Sbjct: 112 YQYGDDAQRDKFLPKLASGEW-------------IGCFGLTEPDSGSDPASMRTRAKIVD 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+++G +  F++ R        GL   ++  K   R
Sbjct: 159 GGYQLTGSKMWITNSPLADVFVVWAKLDGEIAGFILER-----GMTGLSTPKINGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++ T E+     F      L  + G       L       A  ++       A A +Y  
Sbjct: 214 ASVTGEIVMDEVFVPEANRLPKAKGLSAPFGCLNKARYGIAWGAMGAAECCFAAARNYTL 273

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    ++++ +AD+  +IA     + ++    D  +   E       +  + 
Sbjct: 274 ERQQFNRPLAANQLIQKKLADMQTEIALGLQGALQMGRMMDAGQCPVE-------LVSLM 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A  +     +  GG+G  +E  + RH     A +   G+ +   L V   +
Sbjct: 327 KRNNCGKALDIARTVRDMHGGNGISDEYPVIRHMLNLEAVNTYEGTHDIHALIVGRAI 384


>gi|320449975|ref|YP_004202071.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320150144|gb|ADW21522.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 387

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 142/412 (34%), Gaps = 38/412 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
            P  +   + +  E  +   AQ  AR      PQ                 P    L R 
Sbjct: 6   GPGKLLPRVPVDLEKSVRELAQRFAR--ERILPQARHLDQDAR-------FP--WPLFRE 54

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   G    +               +  A     A       +  +   A  + L  +  
Sbjct: 55  AAGLGFPVLVVPEELGGAGLGPRSLVLVAEELAYACTGVAAALLLNNLVADALLLSGSAH 114

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             + + P++                       LTE   G+D AAI +Q +++  G     
Sbjct: 115 -ARSFLPRL---------------REEVASYALTESHAGSDAAAIRTQAERVPGGYRLHG 158

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W   +P +  F++ A+V    G   +   L +    G+       K+G +++   E+
Sbjct: 159 RKTWISHAPEASFFVVFAKV--AEGREGIAAFLVERGT-GVEVGPPLPKLGQKASPAAEV 215

Query: 290 EFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                       +          +        A ++V  +R +L EA+ YA  R   G  
Sbjct: 216 YLDGVLVPEESLITRQGFALAMRVFNRSRPMVAALAVGLLRRALDEALAYAVMREAFGRP 275

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L++   +   +A++ +D+ AA  L+ + A   +  +  + EAA A+  A           
Sbjct: 276 LLEHQGVGVKLAEMHMDLEAARLLTLKAAELAERGEENALEAATAKAFAADAA------- 328

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              ++EA++  GG+GY EE  +A+ YR++    I  G+     L +L  L +
Sbjct: 329 VRGVSEALQVFGGNGYSEEYPLAKLYRDAKVLQIYEGTSEIQRLIILRELVR 380


>gi|163744472|ref|ZP_02151832.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161381290|gb|EDQ05699.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 103/287 (35%), Gaps = 16/287 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +       P  +      L +TE   G+D+  +    ++   G + L+G K F+S     
Sbjct: 104 DQIERYLTPAIRGEKMDALAMTEPDAGSDVRGMKCSAKRDG-GDWVLNGTKHFISGADHA 162

Query: 242 AFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            F+++    G           +   L D    G   +     + +R    + LEF N   
Sbjct: 163 DFVIVFVATGEDDTPHGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMILEFDNCRL 222

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG+++     + +      +  A MSV   R     A++YA  R   G  +    
Sbjct: 223 PDAQVLGEVDGGFAVMNEWLYATRITVATMSVGRARRCFDMALNYAAERKQFGQQIGKYQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD+  +I AA  L+   A   D+          A       K +  +M   V  
Sbjct: 283 GISFQLADMITEIDAAEHLTMAAAWRLDQGLP-------ANREIASAKLYASEMLARVTD 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 336 ATLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|262204245|ref|YP_003275453.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087592|gb|ACY23560.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 611

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 97/541 (17%), Positives = 200/541 (36%), Gaps = 76/541 (14%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYV---LSCTAQELARMANYNTPQLHAYGPGGE 92
            +  D +L +    F  + H+    +   V         E    A+ N P    + P   
Sbjct: 18  LFELDKVLES--GEFGDLDHETAVDMLREVKALAEGPIAESFVDADRNPPV---FDPETH 72

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
               V    ++       I  G            +   ++    A    ++    +  + 
Sbjct: 73  ---SVTIPESFTKSYNALIEGGWDKIGIADELGGLPAPRS-LYWAIGEMILGANPSVFMY 128

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     A++     T    K WA             A   +      + LTE   G+D+ 
Sbjct: 129 AAGAGFANIFFNNGTDEQKK-WA-------------AICSERGWGATMVLTEPDAGSDVG 174

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRL 261
           A  ++  +  DG + + G K F++S   D       ++LA+ EG       +  F VP+ 
Sbjct: 175 AGRTKATQQEDGSWHIDGVKRFITSADQDMTENIFHLVLARPEGAGPGTKGLSLFFVPKF 234

Query: 262 LED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVED 311
             D      G  NG+    +++K+G +++AT E+ F        G+L+G+++     + +
Sbjct: 235 HFDFETGELGERNGVFVTNVEHKMGLKASATCEVTFGQHGTPAKGWLVGEVHKGIAQMFE 294

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAI 359
           +     +     ++S +      A+ YA+ R                  +   P ++R++
Sbjct: 295 VIEHARMMVGTKAISTLSTGYLNALDYAKERVQGADMTQMTDKSAPRVTITHHPDVRRSL 354

Query: 360 ADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARI----MAPITKYWCCKMAPAVI 412
                      A+    A+  D A ++     +A+ A      + PI K    + A A +
Sbjct: 355 MTQKAYAEGLRAIYLYTASHQDVAAAQIVSGADASMAHRVNDLLLPIVKGVGSERAYANL 414

Query: 413 A-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFE-- 466
             E+++ +GGSG++++  I ++ R+S  +S+  G+      D      + +KG  L    
Sbjct: 415 GHESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKIIRDKGQALAHVA 474

Query: 467 -QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE-KIALASSAAALYRAGMND 524
            Q+ S ++ + G+   K    L    +   + + +A  LT   +A    +  LY+ G+  
Sbjct: 475 GQIQSFIDSEAGNGRLKAERQL--LKTALDDVQAMAASLTTNLMAAQEDSKELYKVGLGS 532

Query: 525 I 525
           +
Sbjct: 533 V 533


>gi|120401291|ref|YP_951120.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954109|gb|ABM11114.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 611

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 100/520 (19%), Positives = 195/520 (37%), Gaps = 69/520 (13%)

Query: 54  VHKELELLGE--YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
               +E+LGE   +            + N P    + P       V    ++   +R  I
Sbjct: 35  ADTAVEMLGEMARLAEGPVAASFEDGDRNPPV---FDPKAH---TVTLPESFKKSVRAVI 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D         +A    A + +++    A ++ +     A +   + T    
Sbjct: 89  DGGWDKIGVDEELGGTPMPRA-LFWAIQEHILGANPAVYMYAMGAGFADIFYHLGTDEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  +  DG + + G 
Sbjct: 148 K-WAKLAADRGWGST-------------MVLTEPDAGSDVGAGRTKAVQQPDGTWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQ 273
           K F++S  SD        ++LA+ EG       +  F VP+        E G  NG+   
Sbjct: 194 KRFITSADSDDLFENIMHLVLARPEGAGPGTKGLSLFFVPKFHFDPETGEPGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL          G+L+G+++     + D+     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELSLGQHGVPAVGWLVGEVHEGIAQMFDVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALEYAKERVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKSRSE---EAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D   +++    E   A      M PI K    + A A + E+++ +GGSG++++  I
Sbjct: 374 THQDAEVAKALYGIEPELALKVNDLMLPIVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
            ++ R++  +S+  G+      D      + +KG  L        +     +G   +   
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVAGQIEQFVKAETGNGRLKAE 493

Query: 488 RDSISLCKED-KGLARFLTEK-IALASSAAALYRAGMNDI 525
           R  ++   ED +G+A  LT   +A    A ++Y+ G+  +
Sbjct: 494 RALLATALEDVQGMAASLTGYLMASQEDAKSIYKVGLGSV 533


>gi|256380944|ref|YP_003104604.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255925247|gb|ACU40758.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 612

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 97/515 (18%), Positives = 185/515 (35%), Gaps = 69/515 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  L    +   A   A  ++ N P    + P       V    A+    R       + 
Sbjct: 42  LTELNNLAVGPLADSFAE-SDRNPPV---FDPKTH---SVTLPEAFRQSYRALWDGEWYR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                         + +  A+ L L A   A   M+     A++V    T    + WA  
Sbjct: 95  LSLPEDLGGFGVPPSVQWAASELVLGANPSAYMYMAGP-NFATVVHRNGTDEQKR-WAQF 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +    +  T             + LTE   G+D+ A  ++  +  DG + L G K F++S
Sbjct: 153 MIDDGWGAT-------------MVLTEPDAGSDVGAGRTKAVRQEDGSWHLDGVKRFITS 199

Query: 238 PMSD-----AFIMLAQVEG----------RVGCFLVPRLLED-------GSPNGLCYQRL 275
              D       ++LA+ EG           +  FLVP+   D       G  NG     +
Sbjct: 200 GDQDLTENIMHLVLARPEGPGIESRPGTKGLSLFLVPKFHFDSETGKSTGERNGAFVTNV 259

Query: 276 KNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++K+G +++ T EL F        G+LLG+++     +  +     +     ++  +   
Sbjct: 260 EHKMGLKASTTCELTFGQHGVPAKGWLLGEVHNGIAQMFQVIEYARMMVGTKAIGTLSTG 319

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ YA+ R  S               +   P ++R++           A+    A  
Sbjct: 320 YLNALAYAKERVQSADLTRMTDKTAPRVTITHHPDVRRSLMLQKAYAEGLRAVYLYTATF 379

Query: 380 FDEAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            D  K   E  A A      + P+ K    + A   +A++++ +GGSG++++  I ++ R
Sbjct: 380 QDRIKLGGEGQALAEKVNDLLLPVVKGVGSERAYEQLAQSLQTLGGSGFLQDYPIEQYIR 439

Query: 436 ESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSI 491
           +S  +S+  G+     LD     ++         +   ++  L S G   ++        
Sbjct: 440 DSKIDSLYEGTTAIQSLDFFFRKIIRDKGQALGHINGEIQAFLDSEGGNGRLKEERALLK 499

Query: 492 SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDI 525
              ++ +G+   L   + +     A LY+ G N +
Sbjct: 500 QGLEDLQGMLGALVGFLTSSQEDVANLYKVGQNSV 534


>gi|225562669|gb|EEH10948.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 615

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 116/518 (22%), Positives = 200/518 (38%), Gaps = 84/518 (16%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           + S +     Q P  I    Y  D+    +I+ +     PS + ++L      VLS +  
Sbjct: 2   EASSATKGFFQTPPTIPP-QYVEDAAFRRIISLYLPSPIPSSIDEDLSRFSRLVLSRSHM 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
             A  A  N P L      G   + D +     W  L  R I +G+    +        R
Sbjct: 61  AYAADAEKNQPYLRPLSTFGTENKQDPLVTSEGWRKLQYRGIEEGMVGIAYAN-----AR 115

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 RA       Q    HL + S       AL+T P    D A K+  R  +  N +
Sbjct: 116 GSPWNNRA------YQFIKLHLWTSS------AALVTCPGAMTDGAAKLLGRHLNGANGS 163

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
              +            +   G  +TE++GG+D+    +  +K+S                
Sbjct: 164 IFTEARNRLISRDPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCP 223

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE-------DGSPNGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P           +   NG+  Q
Sbjct: 224 LGPWQLDGFKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVARGAEGETELNGVRIQ 283

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 284 RLKNKLGTKALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLA 343

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRS 387
            +  YA+ R   G +L + P   RA+A   +       L+  +A+        D   +++
Sbjct: 344 ISRAYAKVRIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQA 403

Query: 388 EEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
            +A           A  R++ P+ K      +   +   ME +GG GY+E      ++AR
Sbjct: 404 TQASILPTNAEQSGALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVAR 463

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQL 468
            +R+    SI  G+ + M  D++ +++  +G      +
Sbjct: 464 IFRDVCVLSIWEGTTDIMADDLVRVMKSRQGPATLAAV 501


>gi|254483050|ref|ZP_05096285.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036735|gb|EEB77407.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 601

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 89/483 (18%), Positives = 170/483 (35%), Gaps = 60/483 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +KV+  P     +   I  GL     D     +                A       +  
Sbjct: 70  EKVQMIPEIKVAIDAVIEAGLASPGADYELGGMQLPALATAATGAYLNAAGSTTMGYIGL 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++    T      W               P +    A  + ++E   G+ ++ +
Sbjct: 130 TNANANLIDAHGTQEQKDKWV-------------QPQRSGRFAGTMAMSEPGAGSSLSDL 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+      DG Y +SG+K ++S    +       ++LA+V+G       +  F+VP+ + 
Sbjct: 177 TTTAIPQQDGTYRISGNKIWISGGDHELTENIVHLVLARVKGAVKGVKGISLFIVPKFMV 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    L +K+G R   +  L F       G+L+G+ N     +  M   
Sbjct: 237 NDDGSLGERNDVTLAGLFHKMGGRGQTSTALNFGEKEGAVGYLVGEENRGLMYMFHMMNE 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIAL 364
             +     +          ++ YA+ R                 +I+   +KR +     
Sbjct: 297 ARIMVGSGAAIIALAGYQYSLDYAKERPQGRLPSAKDPLAPPVNIIEHADVKRMLLAQKA 356

Query: 365 DIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
               A AL        D+  +      R+        + P+ K W  +  P   + A++ 
Sbjct: 357 YSEGAYALCLFGTMLADDEHTAHTQEERAAAHELLDFLTPVIKSWPSEYGPKANSMAIQV 416

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL------LEKGTNLFEQLFSTL 472
           +GG+GY+ E  +   YR++  N I  G+     LD+L        L   T     +  T+
Sbjct: 417 LGGAGYVNEHPVEMMYRDNRLNPIHEGTTGIQSLDLLARKVPQNGLAGYTACLNAIGDTI 476

Query: 473 EQDLGSS-GKKVITILRDSISLCKE-DKGLARFLTEK---IALASSAAALYRAGMNDIAD 527
            +   S+   +    L  ++   K+  + L   + EK   + LA+S   L   G   IA 
Sbjct: 477 AEARASAELSEAAEQLSAAVDTLKQVTEFLLGSMAEKDIDLVLANSVKYLDLFGNVVIAW 536

Query: 528 VFL 530
           ++L
Sbjct: 537 MWL 539


>gi|298372014|ref|ZP_06982004.1| acyl-CoA dehydrogenase family protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274918|gb|EFI16469.1| acyl-CoA dehydrogenase family protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 567

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 89/496 (17%), Positives = 172/496 (34%), Gaps = 56/496 (11%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE+ GE          A   ++  P LH         ++V +       L       L  
Sbjct: 55  LEIAGEICG-DIIAPNAESVDHEAPTLHN--------NRVTYARGTSQNLDAMRRADLMG 105

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
               R +  +       +  A +   A     ++       A  +    +   H+ + P+
Sbjct: 106 VTLPRVYGGLNFPITVNVMIADMISRADASFQNVW-GLQDCAETLYEAGSLDQHQRYLPR 164

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLS 236
           I + E               + + LTE   G+D+ A+  +      +  + L+G K F++
Sbjct: 165 ISAGE--------------TMSMDLTEPDAGSDLQAVMLRASFDEKENCWRLNGVKRFIT 210

Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  SD  ++LA+ E G      +   + D    G+  +R++NK G +   T EL + N  
Sbjct: 211 NGDSDIHLVLARSEEGTKDGRGLSMFVYDKRNGGVDVRRIENKKGIKGAPTCELVYKNAK 270

Query: 296 GFLLGDLNVST-GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L+G+  +     V  +     L     S      +  EA  YA  R   G  +I+ P 
Sbjct: 271 AELVGERRLGLIKYVMSLMNGARLGIIAQSTGLSEAAYREAYAYALERRQFGKAIIEFPP 330

Query: 355 MKRAIADIALDIAAATALSFRLANSFD-----------------EAKSRSEEAAYARIMA 397
           +   ++ I     A+ A+ +  A   D                 E +   + +  +    
Sbjct: 331 VYEMLSLIRAKADASRAMLYETARFVDVYKALEDIARERQLTPEERQEMKKYSKLSDAFT 390

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+ K    + A     + ++  GGSGY+++ +  R  R++   +I  G+    V+  +  
Sbjct: 391 PMGKGMASEFANQNTYDCIQIHGGSGYMKDYACERLTRDARITNIYEGTTQLQVIAAIRH 450

Query: 458 LEKGTNLF------EQLFSTLEQDLGSSGKKVITILRDSISLCKEDK------GLARFLT 505
           +  GT L       ++++      L      +  +  +      E K       +AR L 
Sbjct: 451 VTTGTYLTQIRTYEQEIYCECLNPLKQRLIAMTNVYEELAGKVAEAKNTDLLDFMARRLV 510

Query: 506 EKIALASSAAALYRAG 521
           E  +       L R  
Sbjct: 511 EAASHCVFGYLLLRDA 526


>gi|183984502|ref|YP_001852793.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M]
 gi|183177828|gb|ACC42938.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M]
          Length = 382

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D    ++G K +++S +   F++ A  
Sbjct: 114 PTLAGDKIGALAITEPGGGSDVGHLRTSAVRDGDHF-IVNGAKTYITSGVRADFVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAGGVSLLVVEKGTPGFVVSRKLDKMGWRSSDTAELSYTDARVPAANLVGAENSGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       +                K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRSVVERQLAGEHD------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I R YR+     I  G+   +      LL
Sbjct: 347 ESEIERQYRDMRILGIGGGTTEILTALAAKLL 378


>gi|148653334|ref|YP_001280427.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148572418|gb|ABQ94477.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 398

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 135/371 (36%), Gaps = 41/371 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R+    GL     D      +   A+ + A  +  +       +   S      + 
Sbjct: 59  RNIMRQMGELGLLGVTIDGYGCAGLSSVAYGVIAKEVEAVDSGYRSAMSVQSSLVMHPIW 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                 GLTE   G+D  ++ ++ +K+  
Sbjct: 119 AYGTEAQKEKYLPKLATGEY-------------VGCFGLTEPDAGSDPGSMKTRAKKVDG 165

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G        W  +SP++D F++ A+ + G +  F++     +    GL   +++ K   R
Sbjct: 166 GYQLKGSKMWITNSPIADVFVVWAKDDEGEIRGFVL-----EKGMKGLSAPKIEGKFSLR 220

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+   + F        D+    GP         L+ A   ++   +  AE    A
Sbjct: 221 ASITGEIVMDDVFVPEENAFPDIRGLKGP------FGCLNKARYGIAWGSMGAAEFCWKA 274

Query: 340 RR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R     R      L    +++  +AD+  +IA     + R+    DE  +       A 
Sbjct: 275 ARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAALRVGRLMDEHNA-------AP 327

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 328 EMISLIKRNNCGKALNIARVARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHDVHAL-I 386

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 387 LGRAQTGIQAF 397


>gi|282866007|ref|ZP_06275055.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282559046|gb|EFB64600.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 404

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 137/390 (35%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLE 147
           P    WD  E  P    +++ +   GL+   ++   +         ++ A   L      
Sbjct: 29  PAAAEWDAREETP--WPVIQEAARIGLYG--FESLADMYGDPSGLSLQIANEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G  +  +  + + +    TP    +W P+ F  E  P                ++E + 
Sbjct: 85  IGMALFGTSLAVAGIFASGTPDQLAEWVPQCFGDEDAP----------KVAAFCVSEPQA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D++A+ ++ +     D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVSAMRTKARYDEAKDEWVLSGQKAWITNGGIAEIHVVVASVDPALGSRGQAAFVVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVE 310
              GL   R   K+G R++ T ++   +                          +     
Sbjct: 195 GTPGLAASRTVKKLGLRASHTADVFLDDVRVPGHCLLGGKERLDARLARAREGTTAKGQA 254

Query: 311 DMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M          A  ++   R +   A+ YA  R   G  +I+   +  A+ADI  +I A
Sbjct: 255 AMATFEVSRPTVAAQALGIARAAYEYALEYAGEREAFGRRIIENQSIAFALADIRTEIEA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L ++ A      ++             ++K    ++A     +A++ +GG+GY  E 
Sbjct: 315 VRLLIWQAAWMARNDRTFDA------GQGSMSKLRAGELAVTATEKAVQILGGAGYSREH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R YR++   +I  G+     L +   +
Sbjct: 369 PVERMYRDAKIYTIFEGTSEIQRLVIARAI 398


>gi|167967750|ref|ZP_02550027.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis H37Ra]
          Length = 382

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 117/308 (37%), Gaps = 17/308 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                    V ++     +  P +      ++ +    PT             L +TE  
Sbjct: 76  MHQAGAPGGVYASLFTCGIAVPHMVASGDERLIATYVRPTL-----AGEKIGALAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V  L+ +  
Sbjct: 131 GGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVSLLVVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  
Sbjct: 190 TPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSERIGLAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + S  +  L     + R R   G  LI +  ++  +A++A  I  A   +  +       
Sbjct: 250 AYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHVVERQLAG 309

Query: 384 KSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    +  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I
Sbjct: 310 ETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGI 362

Query: 443 LLGSGNAM 450
             G+   +
Sbjct: 363 GGGTTEIL 370


>gi|307324572|ref|ZP_07603779.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306889816|gb|EFN20795.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 385

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 136/365 (37%), Gaps = 31/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               ++    G+        +     + + K  A      A+       S   T+  +  
Sbjct: 40  RDFYKKLGELGVFGIEVPEEYGG-AGETSFKFNAVITEETARAGVSFGGSSVHTALCLPY 98

Query: 164 L--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           L         + W P   +               +   + +TE   G+D+A + +  +  
Sbjct: 99  LLKYANEEQKRRWLPSFVTG-------------DLMTAIAMTEPGTGSDLAGMKTTAKLS 145

Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            DG  Y L+G K F++  + +D  ++ A+            +  L+ D    G    R  
Sbjct: 146 EDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDRRSGISILVVDTKSEGYAVGRKL 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G +++ T EL F++       LLG+   + G +        L  A+ + +    ++ 
Sbjct: 206 EKLGLKTSDTAELSFTDVKVPVEDLLGEEGKAFGYLTHNLPQERLGIAVGAYAQAAAAVR 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  Y R R V G  +      K  +AD   ++ A  A+  R  ++ D  +  + +AA A
Sbjct: 266 FATEYVRDRTVFGQAVASFQNTKFVLADCQSEVDAMQAVVDRALDAHDADELTAADAASA 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  + A  VI + ++  GG GY+ E  IAR Y ++  N I  G+   M   
Sbjct: 326 -------KLFTTERAAVVIDKCLQLHGGYGYMMEYPIARLYADTRVNRIYGGTSEVMRSM 378

Query: 454 VLNLL 458
           V   +
Sbjct: 379 VAKSM 383


>gi|297195784|ref|ZP_06913182.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722201|gb|EDY66109.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 409

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 130/395 (32%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKLGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIAGVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVE 310
           +  GL   +   K G R++ T E+   +                            G  E
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGGCLLGGKEKLDERLARARERAKAGGGE 254

Query: 311 DMKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +K                M+V   R +   A+ YA  R   G  +ID   +   +AD+ 
Sbjct: 255 RVKNAAMATFEASRPAVGAMAVGTARAAYEVALDYATTREQFGRPIIDNQGIAFQLADMR 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+G
Sbjct: 315 TRIDAARLLVWRASWMATTGKPFTSA------EGSMSKLFASETAKQVTAQAIQILGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 369 FTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 403


>gi|300681025|sp|A8WP91|ACAD2_CAEBR RecName: Full=Probable medium-chain specific acyl-CoA dehydrogenase
           2, mitochondrial; Short=MCAD; Flags: Precursor
 gi|309365967|emb|CAP22297.2| hypothetical protein CBG_00953 [Caenorhabditis briggsae AF16]
          Length = 408

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 49/379 (12%), Positives = 121/379 (31%), Gaps = 38/379 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   ++D+    P    ++R++   GL        +                        
Sbjct: 47  PNAAKFDESGEFP--WEIIRQAHSLGLMNPQIPEKYGGPGMTTLETTLIVEALSYGCTGL 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     + + V +       K +                +    +     +TE   G
Sbjct: 105 QLGIMGPSLAIAPVYIAGNEEQKKKYL-------------GALAAEPIIASYCVTEPGAG 151

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDG 265
           +D+  + ++ +K  +         W      +  F +LA+ +              + DG
Sbjct: 152 SDVNGVKTKCEKKGNEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDG 211

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI------LIYLD 319
             +G+   + +  +G R + T  + F +       + NV   P    K+      +    
Sbjct: 212 DTSGITRGKKEKNMGQRCSDTRTITFEDVRVP---EENVLGPPGAGFKVAMSAFDMTRPG 268

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  ++      L E+  YA +R   G  + +   ++  ++D+A+++  A  ++++ A  
Sbjct: 269 VAAGALGLSWRCLDESAKYALQRKAFGTEIANHQAVQFMLSDMAINLELARLITYKSATD 328

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S  A+ +            +  P +    +     +G+  E  + +  R++  
Sbjct: 329 VDNGVRSSYNASKS----------ASQRIPRI-RRLLMLFRCNGFNSEYPVEKLMRDAKI 377

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+     + +  +L
Sbjct: 378 YQIYEGTSQIQRIVISRML 396


>gi|262279186|ref|ZP_06056971.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259537|gb|EEY78270.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 607

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 94/519 (18%), Positives = 181/519 (34%), Gaps = 87/519 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       L A          
Sbjct: 71  ERVTVNPEVGVALKAFADAGLMSAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P   K +   +   +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGEPEKVKPYVNAMMEGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++  K  DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 178 RTRAIKTEDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVP 237

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D +      N +    + +K+G R      L F              G L+G+   
Sbjct: 238 RKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              LI  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKNRVQ-GRSRSERNPSSPQIPLIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +      ++ A AL    A   D+      A+ R++      ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQANQLLDLLTPVVKSWSSE 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L    +      
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLS 476

Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALAS 512
              L E++ +T+ Q       K    L+D      +   L + +TEK        + LA+
Sbjct: 477 MKLLHEKIMNTITQA------KAEPSLKDHADHLAQKWQLIQNVTEKLHALTDVELQLAN 530

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
           +A  L   G   +  ++L     D     H ++    + 
Sbjct: 531 AANYLEAFGHLVVGWLWL-----DQAVVIHKLMPNSTDP 564


>gi|255535084|ref|YP_003095455.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341280|gb|ACU07393.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae
           bacterium 3519-10]
          Length = 595

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 84/487 (17%), Positives = 175/487 (35%), Gaps = 73/487 (14%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVA 163
            ++R+    G+        +  +       + A  +   A    A    + +      + 
Sbjct: 65  EVMRKMGEMGILGVAVPEQYGGLGMGFITTMLACDMASGANGSVATAYGAHTGIGTLPIL 124

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +  +   + P +                +      LTE   G+D  +  ++ +   D
Sbjct: 125 LYGSEELKNKYLPDL-------------AAGTKFGAYCLTEPDAGSDANSGKTKARLSED 171

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G          W  ++  +D F   A++  +  +  F++ R  E   P  +     ++K+
Sbjct: 172 GKHYVINGQKMWISNAGFADTFTFFAKIEDDKNITGFVINR-SELEDPAQMTMGEEEHKL 230

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM-----RVSLA 333
           G RS++T ++ F++    +    NV        KI L  L+   + ++       R  LA
Sbjct: 231 GIRSSSTRQVYFNDMKVPV---ENVLGERNNGFKIALNALNVGRIKLAAANLDGQRRILA 287

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  YA  R   G  +     +++ IA++A  I  + A S+R A    +           
Sbjct: 288 LATQYANERKQFGVAIATFGAVRKKIAEMATGIFVSEAGSYRAARDIQDKIDELVAGGMN 347

Query: 394 RIMA------------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              A             I K +   +      E ++  GG G+ E+  +   +R+S  + 
Sbjct: 348 HQEAELKGVEEYAVECSILKVFVSDLTQHTADEGIQIYGGMGFSEDAPMEAAWRDSRISR 407

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL- 500
           I  G+     L  + +L K T                  K  I +L+ ++++ KE  G+ 
Sbjct: 408 IYEGTNEINRLLAVGMLIKKT-----------------MKGEIDLLKPAMAVGKELMGIP 450

Query: 501 -------ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553
                  +  L+E+ AL ++   ++      ++   L+   +D     H +L    NA+ 
Sbjct: 451 SFDVPDYSELLSEEKALLTNLKKVFLM----VSGAALQKYMMDIEKQQHLLL----NASE 502

Query: 554 IIDSLYL 560
           I++ +Y+
Sbjct: 503 ILNQIYM 509


>gi|111219692|ref|YP_710486.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147224|emb|CAJ58874.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 392

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 136/366 (37%), Gaps = 27/366 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR--LYLMAQLEAGHLMSPSVTSASMV 162
            LL+     GL        +         +   A     + A L+A   ++ S+ +  ++
Sbjct: 46  ELLKLMGDQGLLGCFAPEEYGGGGGSLMTRAIVAEETARVDAGLDATLFVNMSLIARHLI 105

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + +               P+   + +  + LTE  GG+D  +  +  +   
Sbjct: 106 K-RGTEGQKRKYL-------------VPLIAGTSSASICLTEPHGGSDALSPRTTARLDG 151

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D         +  ++P++D F++ A+  G             +    GL   +  +K+  
Sbjct: 152 DEWVIDGSKTFITNAPIADVFLVFARTSGENRRARGGTAFFVEKDTPGLSVGQPFDKLSL 211

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           RS+ T E+   N    +  +LG++++    + +   L  +     +    +  L  A+ Y
Sbjct: 212 RSSPTAEVFLDNVRVSWDQVLGEVDMGFYYMLEGLDLERVFEGASNTGIAQACLELAVEY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           + +R V G  L    + +  IA IA  +  +  + + L    +  +  +  +A       
Sbjct: 272 SGQRTVFGEQLSSYQLTQDKIARIATGVEMSRVMFYHLIRELERGEELTRSSA------- 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K +  ++A     E ++ +GG G +EE   AR YR++  + I  G+   M + +    
Sbjct: 325 ILKLYSSQVAVEASREVVQILGGYGLMEEYPAARLYRDAKHHEIGAGTSEIMKVIIARET 384

Query: 459 EKGTNL 464
            K    
Sbjct: 385 YKAAGA 390


>gi|16082509|ref|NP_393775.1| Acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
          Length = 369

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 29/305 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  K+FS                 +GL +TE  GG+D+A I +   K
Sbjct: 87  VIALFGNDDQKKKYLSKVFSG-------------QAKMGLAVTEPGGGSDVANIKTTAVK 133

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y L+G K F+++   +D F++LA+    +     +   + + + +G    ++  K
Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNFDGFKSNKIHGK 192

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-H 337
           +G R+  T EL   N        +           I+ + D +   V+   + +AE I  
Sbjct: 193 LGVRATDTAELTLENVKVPAENLVGEPGRGFYY--IMTFFDISRAYVAAQALGIAEGILE 250

Query: 338 YARRRHVSGGILIDQP-VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            A       G +  QP  ++ AIAD+A  I AA  L++  A+                 +
Sbjct: 251 RAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASFIFNFNPNPA-------V 303

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K +  + A  V  +AME  G  G      I R +R++    I  G+     L +  
Sbjct: 304 TSMAKAYAAETAVYVSRKAMEITGIDGLSSN--IERSFRDAKIMEIWEGTSEIEKLVIAR 361

Query: 457 LLEKG 461
           +L+ G
Sbjct: 362 MLKVG 366


>gi|15608115|ref|NP_215490.1| acyl-CoA dehydrogenase FADE13 [Mycobacterium tuberculosis H37Rv]
 gi|15840401|ref|NP_335438.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|121636901|ref|YP_977124.1| putative acyl-coa dehydrogenase fadE13 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660755|ref|YP_001282278.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis H37Ra]
 gi|148822184|ref|YP_001286938.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis F11]
 gi|215402778|ref|ZP_03414959.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis 02_1987]
 gi|218752643|ref|ZP_03531439.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|219556841|ref|ZP_03535917.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|224989372|ref|YP_002644059.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799997|ref|YP_003032998.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 1435]
 gi|254231280|ref|ZP_04924607.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis C]
 gi|254363899|ref|ZP_04979945.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549957|ref|ZP_05140404.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185880|ref|ZP_05763354.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|260199996|ref|ZP_05767487.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|260204183|ref|ZP_05771674.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289442392|ref|ZP_06432136.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|289446550|ref|ZP_06436294.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|289555243|ref|ZP_06444453.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 605]
 gi|289568948|ref|ZP_06449175.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|289573606|ref|ZP_06453833.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289744706|ref|ZP_06504084.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis 02_1987]
 gi|289761110|ref|ZP_06520488.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|294996465|ref|ZP_06802156.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis 210]
 gi|297633499|ref|ZP_06951279.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 4207]
 gi|297730484|ref|ZP_06959602.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN R506]
 gi|306775107|ref|ZP_07413444.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu001]
 gi|306781978|ref|ZP_07420315.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu002]
 gi|306783658|ref|ZP_07421980.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu003]
 gi|306788021|ref|ZP_07426343.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu004]
 gi|306792358|ref|ZP_07430660.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu005]
 gi|306796757|ref|ZP_07435059.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu006]
 gi|306802644|ref|ZP_07439312.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu008]
 gi|306806824|ref|ZP_07443492.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu007]
 gi|306967022|ref|ZP_07479683.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu009]
 gi|306971213|ref|ZP_07483874.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu010]
 gi|307078941|ref|ZP_07488111.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu011]
 gi|307083499|ref|ZP_07492612.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu012]
 gi|313657812|ref|ZP_07814692.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN
           V2475]
 gi|3261633|emb|CAB02012.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE13 [Mycobacterium tuberculosis
           H37Rv]
 gi|13880569|gb|AAK45252.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|121492548|emb|CAL71016.1| Probable acyl-coa dehydrogenase fadE13 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600339|gb|EAY59349.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis C]
 gi|134149413|gb|EBA41458.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504907|gb|ABQ72716.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis H37Ra]
 gi|148720711|gb|ABR05336.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis F11]
 gi|224772485|dbj|BAH25291.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321500|gb|ACT26103.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 1435]
 gi|289415311|gb|EFD12551.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T46]
 gi|289419508|gb|EFD16709.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CPHL_A]
 gi|289439875|gb|EFD22368.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 605]
 gi|289538037|gb|EFD42615.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis K85]
 gi|289542702|gb|EFD46350.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T17]
 gi|289685234|gb|EFD52722.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium tuberculosis 02_1987]
 gi|289708616|gb|EFD72632.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis GM 1503]
 gi|308216453|gb|EFO75852.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu001]
 gi|308325299|gb|EFP14150.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu002]
 gi|308331571|gb|EFP20422.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu003]
 gi|308335366|gb|EFP24217.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu004]
 gi|308339168|gb|EFP28019.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu005]
 gi|308342835|gb|EFP31686.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu006]
 gi|308346730|gb|EFP35581.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu007]
 gi|308350643|gb|EFP39494.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu008]
 gi|308355303|gb|EFP44154.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu009]
 gi|308359348|gb|EFP48199.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu010]
 gi|308363255|gb|EFP52106.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu011]
 gi|308366913|gb|EFP55764.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis SUMu012]
 gi|323720686|gb|EGB29764.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis CDC1551A]
 gi|326904799|gb|EGE51732.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis W-148]
 gi|328459739|gb|AEB05162.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis KZN 4207]
          Length = 382

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 117/308 (37%), Gaps = 17/308 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                    V ++     +  P +      ++ +    PT             L +TE  
Sbjct: 76  MHQAGAPGGVYASLFTCGIAVPHMVASGDERLIATYVRPTL-----AGEKIGALAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V  L+ +  
Sbjct: 131 GGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVSLLVVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  
Sbjct: 190 TPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSERIGLAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + S  +  L     + R R   G  LI +  ++  +A++A  I  A   +  +       
Sbjct: 250 AYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHVVERQLAG 309

Query: 384 KSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    +  +A+  A     W       V  +A++  GG GY+ E  + R YR+     I
Sbjct: 310 ETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMRILGI 362

Query: 443 LLGSGNAM 450
             G+   +
Sbjct: 363 GGGTTEIL 370


>gi|226308698|ref|YP_002768658.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187815|dbj|BAH35919.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 388

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 26/360 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            + +++   GL      + +  +       +  A  +    L       + +  +  ++ 
Sbjct: 39  DIRKKAAAIGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W  +I S               V     LTE   G++ A + ++      
Sbjct: 99  GFGTDEQKAQWLERIASG-------------DVVASFALTEPGAGSNPAGLRTKAVLDGS 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++  F++ A+          +   L      G+       K+G  
Sbjct: 146 EWVIDGNKRFITNAPLAQLFVVFARTRPADSDGPGIAVFLVPADTPGVTVGPKDKKMGQE 205

Query: 283 SNATVELEFSNTFGFLLGDLNVST--GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
              T E+ F N        +      G    M  L    +  A +SV   + +L E++ +
Sbjct: 206 GAWTSEVTFDNVRVPESALVGGDQDTGYRAAMTSLARGRVHIAALSVGAAQRALDESVAF 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           +      G  + D  +++  +AD    + A  A+   +A  +   + R       R+   
Sbjct: 266 SVVTEQGGTAIGDFQLVQAMLADQQAGVMAGRAMVREVAARYVSGEDR-------RLGPS 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +M   V   A++  GG+GY+    + R YRE     +  G+     L +   L
Sbjct: 319 AAKLFCTEMVGKVADLAVQIHGGNGYMRGVPVERIYREVRLLRLYEGTSEIQRLILGGGL 378


>gi|319760749|ref|YP_004124686.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822669|ref|YP_004385972.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115310|gb|ADU97798.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308041|gb|AEB82456.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 387

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 136/378 (35%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+  E  PA H + ++    G         F  +    +++I         +   
Sbjct: 23  PHVDEWEAAEIFPA-HEVFKKLGSAGFLGVNKPVEFGGMGLDYSYEI------AFCEAIG 75

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G        + ++   M TP +         S E       P     + + LG++E   G
Sbjct: 76  GISSGGVGMAIAVQTDMATPAL-----THFGSDELRELFLKPTVAGDMVVCLGVSESGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGR----VGCFLVPRLLE 263
           +D+A++ +  +K  D         W  +   +D   +LA   EG          +P    
Sbjct: 131 SDVASLKTTARKDGDDYVINGSKMWITNGTQADWMCLLANTSEGDVHRNKSLICLPLREN 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDS 320
                G+  Q++K K+G  ++ T ++ F          +     G    M+      L  
Sbjct: 191 GKLRPGISMQKIK-KVGMWASDTAQVFFDEVRVPQRYRIGEEGKGFTYQMRQFQEERLSG 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V+ +   + E I Y R+R   G  ++D   +   +A++  ++    +L +R A   
Sbjct: 250 ATRRVTALSNVIDETIAYTRQRKAFGRSILDNQAVHFRLAELKTEVEMLRSLIYRAAQVH 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 +E       +A + K    ++   V    ++  GG G+  E  ++R +R+    
Sbjct: 310 MGGGDMTE-------LASMAKLKAGRLCREVTDSCLQYWGGMGFTWENKVSRAWRDLRLI 362

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+   M+  +   +
Sbjct: 363 SIGGGADEIMLTIICKHM 380


>gi|241765709|ref|ZP_04763657.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241364426|gb|EER59539.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 131/367 (35%), Gaps = 33/367 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +        ++ + A  +  +           S      +    
Sbjct: 56  REMGELGLLGPTIPTQYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ S E+                 GLTE   G+D  ++ ++  K + G  
Sbjct: 116 TEAQKQKYLPKLASGEF-------------IGCFGLTEPDHGSDPGSMATRAYKTAGGYK 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+     G    +   + +    GL    +  K+G R++ 
Sbjct: 163 LKGSKMWITNSPVADVFVVWAKEVSEGGTVGPIRGFVLEKGMKGLTAPAIHGKVGLRASI 222

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR--- 341
           T E+   + F         +   V+ +K     L+SA   ++   +  AE   +  R   
Sbjct: 223 TGEIVMDDVFVPEEN----AFPEVQGLKGPFTCLNSARFGIAWGALGAAEFCWHTARQYT 278

Query: 342 --RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L    ++++ +AD+  +I      + R+    DE ++  E       +  +
Sbjct: 279 LDRKQFGRPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSL 331

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   +
Sbjct: 332 IKRNNCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQ 390

Query: 460 KGTNLFE 466
            G   F 
Sbjct: 391 TGIAAFA 397


>gi|319796374|ref|YP_004158014.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598837|gb|ADU39903.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 397

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 137/403 (33%), Gaps = 23/403 (5%)

Query: 67  SCTAQELARMANYNTPQLHAYGPG--GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           S     L      +        P    +  D+ +   A    +RR    G        S 
Sbjct: 10  STAHLALPFFDEAHRALARDLLPWCAAQEIDERDDRAACREWVRRLGDGGWLRYAVPGSA 69

Query: 125 EPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              + +   +        +      A    +     +  + L  TP     +        
Sbjct: 70  GGALERLDSRALVLLRETLGYHSPLADFAFAMQGLGSGAITLAGTPEQQSQYL------- 122

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                   + K        L+E   G+D+AA+  + +  +DG        W  +  ++D 
Sbjct: 123 ------TAVGKGDKIAAFALSEPDAGSDVAAMAMRAEPTADGWLLNGTKTWISNGGIADF 176

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           + + A+ +   G   +   + D +  GL      + +     AT  L F N        L
Sbjct: 177 YCVFAKTDPTGGTRGITVFIVDATTPGLDTSEHIDVMAPHPLAT--LRFENCVVPRTAQL 234

Query: 303 NVSTGPVE-DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               G  +  M+ L       A  ++   R +LAEAI +A+ R + G  L D  + +  +
Sbjct: 235 GELNGGFKLAMRTLDIFRASVAAAALGMGRRALAEAIAHAKGRRMFGQTLADFQLTQAKL 294

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMEC 418
            ++A  I +A  L++R A   D+A+ R   A       A + K    + A  VI  A++ 
Sbjct: 295 GEMAALIDSAALLTYRAAWMRDDAEQRGAAAVGDVSAAAAMAKMCATENASRVIDMALQM 354

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG G      I   YR+  +  I  G+     L +   + +G
Sbjct: 355 HGGLGVKVGTKIESLYRDIRSLRIYEGATEVQQLIIGKSVLRG 397


>gi|91214963|ref|ZP_01251935.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
 gi|91186568|gb|EAS72939.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC
           700755]
          Length = 392

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 147/401 (36%), Gaps = 45/401 (11%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRS 123
            A +   + +  T +          W K +  P      +++     I  GL        
Sbjct: 7   QAPDYYEIDDLLTEEHRMIRQAARDWVKRDVSPIIEEAAQKAEFPKSIIKGLSNIGAFGP 66

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM------VALMTTPRVHKDWAPK 177
           + P     A   + +   +M ++E G     S  S         +    T    K + PK
Sbjct: 67  YIPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMFPIYEFGTEEQRKKFLPK 126

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                 GLTE   G++ + +T+      D         W  +S
Sbjct: 127 LASGEFMG-------------SFGLTEPDHGSNPSGMTTHFVDKGDHYLLNGAKMWISNS 173

Query: 238 PMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           P  D  ++ A+  EGR+   +V R +E     G       NK   R++AT EL F +   
Sbjct: 174 PFCDIAVVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASATGELIFQDVKV 228

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
                 N+  G       L+ LDSA   ++   +  A      A+ YA+ R   G  +  
Sbjct: 229 P---KENLLPGKSGLGAPLLCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAG 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + ++ +A++  +I  A  L+ RL    +E K+ + + + A+           +MA  +
Sbjct: 286 YQLQQKKLAEMITEITKAQLLALRLGQLKNEGKASTAQISMAKR-------NNVEMAIHI 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             E+ + +GG G   E SI RH     +     G+ +  +L
Sbjct: 339 ARESRQILGGMGITGEYSIMRHMMNLESVITYEGTHDIHLL 379


>gi|239939649|ref|ZP_04691586.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986133|ref|ZP_04706797.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443075|ref|ZP_06582465.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346022|gb|EFE72926.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 408

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPDIGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
              GL   +   K G R++ T E+   +        L                +    E 
Sbjct: 195 DTPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDERLARARERAKAGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+G+
Sbjct: 315 RIDAARLLVWRASWMATTGKPFTSA------EGSMSKLYASETARDVTAQAIQILGGNGF 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|327296357|ref|XP_003232873.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892]
 gi|326465184|gb|EGD90637.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892]
          Length = 641

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 118/523 (22%), Positives = 196/523 (37%), Gaps = 80/523 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    I       D++L  +++       P  + K+       V+S    + 
Sbjct: 27  SSSTEGFFQVQPSIQP-QIQEDAVLRRIVSLHLPSPLPPNLEKDFTRFSSLVISKPVLDY 85

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +     W ALL  SI + L     +        + 
Sbjct: 86  AAEAERNQPYLKPLSTFGIENKQDPLVTGEGWRALLEISIRESLVGLAPEPGLTGHGTQW 145

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR---------- 181
             ++        ++    HL +PS       A++T P    D A K+ SR          
Sbjct: 146 NTRV--------SKGIKTHLWTPSS------AMVTCPGSMTDGAAKLLSRHLDSKNGRIF 191

Query: 182 -EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI-------- 225
            E      +     +   G  +TE+ GG+D+    +  +K         DG+        
Sbjct: 192 AEALKRLTSCDPAIAWTSGQWMTERSGGSDVRGTETVARKLTPEEMEEDDGVDSVGMPLG 251

Query: 226 -YCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPN-------GLCYQRLK 276
            + L G KWF S+  ++  I+LA+  E  +  F  P   +    N       G+  QRLK
Sbjct: 252 PWRLDGFKWFSSATDANMSIILAKTGEHSISAFYAPLRRQVKGRNPRESELNGVRIQRLK 311

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K G ++  T ELE     G+L+G        +  +  +    + I SVS    SLA   
Sbjct: 312 IKFGTKALPTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICR 371

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI- 395
            Y++ R  SG +L D P   R +A   +  AA+  L+F +      ++ RS  +  A   
Sbjct: 372 AYSKVRVTSGRLLQDTPSYVRTLARDHVKYAASMHLTFFIVALLGISEGRSSSSCMAAQT 431

Query: 396 ----------------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYR 435
                           + P+ K      A   +  +ME +GG GY+E       IAR +R
Sbjct: 432 NILPRDKNSTLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFR 491

Query: 436 ESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDL 476
           ++   SI  G+   M  D++ +++  +G +    L + +   L
Sbjct: 492 DTCVLSIWEGTTEVMADDLMRVVKGSEGPDCLNALDNWVAHGL 534


>gi|118464925|ref|YP_880805.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118166212|gb|ABK67109.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 397

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 45  DLRDQAKKMGLFGYAIPQQWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W               PM    V     LTE   G++ A + ++     D
Sbjct: 105 GFGTEAQKARWLE-------------PMAAGDVVASFALTEPGAGSNPAGLRTKAVADGD 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P+++ F++ A+          +   L      G+       K+G  
Sbjct: 152 NWVISGQKRFITNAPVANLFVVFARTRPADDQGPGIAVFLVPADAAGVQIGAKDAKMGQE 211

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 212 GAWTADVSFDDVRVGGDALIGGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSY 271

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  +AD   ++ A  AL    A  +   + R            
Sbjct: 272 ASTATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRRVA-------PS 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L + + L
Sbjct: 325 AAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNL 384

Query: 459 EKGTN 463
            K   
Sbjct: 385 VKAAQ 389


>gi|313126607|ref|YP_004036877.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312292972|gb|ADQ67432.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 382

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 135/399 (33%), Gaps = 37/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
              +  TA+E A    +  PQ   Y   GE  WD          +L   +  GL      
Sbjct: 13  ARDVKQTAREFAE--EHIRPQAEEYYESGEYPWD----------ILEAGMDAGLVAQDIS 60

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +               L ++A  E  + +   +    M+A      + +D+     S+
Sbjct: 61  EEYGGKGYD--------LLQILAINEELYRVDAGIALTLMLASFGC-EIVEDYG----SQ 107

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P+ +     GL ++E + G+D+A +T+  +K  DG        W  ++  +D
Sbjct: 108 EQKEKYLRPVAENEQISGLAVSEPQTGSDMAGMTTTAEKTDDGWVLNGEKYWVGNAVEAD 167

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
              + A+  +           + +    G   + +  K+G R++    + F +       
Sbjct: 168 WLTVYAKTGDTDDRYSNYTMFIVETDTEGYEAEHIPEKMGMRASKQGHIVFDDCVVPEEN 227

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           ++G        + D      +      +     ++ E   +   R   G  + D    + 
Sbjct: 228 VIGTPGGGFYMLADFFNHGRVVVGGHGIGLAAHAIEETWEFVHEREGFGRNISDFQSTQH 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ ++  AA +L++R A      ++       A   A   K    + A       M+
Sbjct: 288 ILADMRMEFEAARSLNWRAAEKVANGEN-------AGFWAASAKTKSTETAMMCAERGMQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG   + E  I+R YR+     I  G+       +  
Sbjct: 341 LHGGRSVLNEYPISRVYRDVRIPVIYEGANEIQRNLIYR 379


>gi|301631915|ref|XP_002945040.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 389

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 137/400 (34%), Gaps = 32/400 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L   A+    +A   T     + P  +  D+ + +P  H  LR  +  G+      + + 
Sbjct: 3   LDAEARRWQELAAGLT--QSHFAPLADAIDREQRYPVEH--LRPLLESGISGMFLPQPYG 58

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                                    +M+     A  V L       +             
Sbjct: 59  GGGASLVALAAVVETIAAGCASTAAIMAALSLGAFPVLLGGNEEQKQALL---------- 108

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                + +   A+   L+E+  G+D AAIT+      DG        W  +   S+ FI+
Sbjct: 109 ---GGLARRGEAVNFALSERAAGSDAAAITTTAVHEGDGWRIRGEKCWLGNGGHSEHFIV 165

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A          +       S  G      ++K+G R   T   +  + +      +   
Sbjct: 166 FALTGESGARNNISAFWVPRSTPGAAVDFYEDKMGIRGTTTTNFKL-DVWRPRSSMVGSE 224

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360
              ++    L  L    + V+   + +A      A+ +A +R   G  +ID   +   +A
Sbjct: 225 GHGLK--LALSTLTIGRIVVAAQALGIALCSYRAAVEFATQRQTFGQAIIDHQGVGFMLA 282

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D A  ++A   + +  A ++DE +  S   A A       K +  + A  V  +AM+ +G
Sbjct: 283 DAATHLSATRMMVYEAAKAYDEGRDVSTLGAMA-------KLFASEAAHKVCDDAMQILG 335

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G GY++   + R YR+     I  G+     L +   +++
Sbjct: 336 GRGYVKPSVVERCYRDQRITEIYEGTSEIQRLVIARAVKR 375


>gi|332993290|gb|AEF03345.1| acyl-CoA dehydrogenase-like protein [Alteromonas sp. SN2]
          Length = 600

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 75/463 (16%), Positives = 155/463 (33%), Gaps = 58/463 (12%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+V                G     +D     +          A  +L A         
Sbjct: 75  IDEV------KKAFDTYRESGFIAGHFDYEDGGMQLPVTIMNACAGYFLAANPSTTAYPF 128

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +A++V         + + PK+ + ++  T             + LTE   G+ +A 
Sbjct: 129 LTAAAANVVKHFANEETKQAFLPKMLTGDFTGT-------------MALTEPHAGSGLAD 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLED--- 264
           I +      DG Y + G K ++S+   +       ++LA++ G   G   +   +     
Sbjct: 176 IRTSATLHEDGTYRVKGSKLYISAGEHELSDNIVHLVLAKIPGGPAGVKGISLFVVPKYR 235

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKI 314
                  G  N +    L +K+G R   +  L F    +  G+L+G+ +     +  M  
Sbjct: 236 LDENGNPGPRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLVGEPHQGLRYMFMMMN 295

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIA 363
              +     +          ++ YA+ R                 +I+   ++R +    
Sbjct: 296 EARIGVGYGAAMIGYRGYRYSLEYAKDRTQGRAAPKLAPEDEATPIINHGDVRRMLLAQK 355

Query: 364 LDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
                  AL    +   D  ++      R+E +    ++ P+ K W  +  P     A++
Sbjct: 356 SYCEGGMALCLYGSTLIDALETEEDTAKRTEISQLLELLTPVFKAWPSEFGPKANDLAIQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475
            +GG+GY  E  + + +R++  N I  G+     LD+L   L +      + L + +  D
Sbjct: 416 ILGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKLWQSEGKGLQVLMARVSGD 475

Query: 476 LGSSGKKVITILRDSIS-LCKEDKGLARFLTEKIALASSAAAL 517
           + ++       L   +     +  GL +     +     A  L
Sbjct: 476 MKAATTPRAQALAAKLKPYLDQLGGLIQQAAGDLRSDKQAVLL 518


>gi|15600213|ref|NP_253707.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107104120|ref|ZP_01368038.1| hypothetical protein PaerPA_01005193 [Pseudomonas aeruginosa PACS2]
 gi|218894119|ref|YP_002442988.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254238271|ref|ZP_04931594.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719]
 gi|254244096|ref|ZP_04937418.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192]
 gi|9951307|gb|AAG08405.1|AE004914_6 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|126170202|gb|EAZ55713.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719]
 gi|126197474|gb|EAZ61537.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192]
 gi|218774347|emb|CAW30164.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 600

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 76/455 (16%), Positives = 160/455 (35%), Gaps = 64/455 (14%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P     +   +  G   +        +             +  A + +      ++ +A+
Sbjct: 76  PEVKPAVDAFLDAGFLNATRSFEQGGMQLPTLLSQACFAHFQAANVGSSAYPFLTMGAAN 135

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++    +    + +               PM +      + LTE   G+ ++ I ++ + 
Sbjct: 136 LIESFGSEEQKQRFL-------------QPMIEGRFFGTMALTEPHAGSSLSDIRTRAEP 182

Query: 221 ISDGIYCLSGHKWFLSSPMS-----DAFIMLAQVEG------RVGCFLVPRLLED----- 264
            +DG Y + G+K F+S            ++LA++         +  F+VP+ L +     
Sbjct: 183 AADGSYRIKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNADGSL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  N +    L +K+G R   +  L F +     G+L+G  +     +  M     +   
Sbjct: 243 GPRNDVILAGLFHKMGYRGTTSTALNFGDNGACVGYLVGKPHHGLAYMFQMMNEARIGVG 302

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
           + +V         ++ YAR R       G         +I    ++R +      +  A 
Sbjct: 303 MGAVMLGYAGYLYSLEYARERPQGRLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAF 362

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            L    A  FD+       + R +      ++ PI K W  +        A++ +GG GY
Sbjct: 363 DLGLYAARLFDDSQTLEDDEQRRQAHDLLDLLTPIVKSWPSEFCLKANELAIQILGGHGY 422

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             E  + ++YR++  N I  G+     LD+L                + Q+ G+  +++ 
Sbjct: 423 TREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG-------------RKVGQNNGAGLRQLT 469

Query: 485 TILRDSISLCKEDKGLA--RFLTEKIALASSAAAL 517
            +++D+    +    L   R   E++    S   L
Sbjct: 470 RLIQDACRRAEAHPSLVALRQPLERLVARLSEVTL 504


>gi|312141407|ref|YP_004008743.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325673172|ref|ZP_08152865.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311890746|emb|CBH50065.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325556007|gb|EGD25676.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 611

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 96/542 (17%), Positives = 198/542 (36%), Gaps = 71/542 (13%)

Query: 34  MNAYS---SDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            N +     D  L   +  +  +   K++      +      E    A+ N P    + P
Sbjct: 13  FNLFEVLGLDKPLSEGVWGDLDADTVKDMLSEVARLAEGPLGEAFADADRNPPV---FDP 69

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                 +     ++    +       +          V   +A     A + L +Q  A 
Sbjct: 70  EKH---EATLPESFKKSFKAMWDAEWYRMGLSEEVGGVPVPRAVVWAIAEMLLGSQPAAF 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              +     A ++    T    + WA  +  R +  T             + LTE   G+
Sbjct: 127 MYAAGPSF-ADVLFKNGTDEQKQ-WAATLVERGWGAT-------------MVLTEPDAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCFL 257
           D+ A  ++  +  DG + + G K F++S  SD        ++LA+ EG       +  F 
Sbjct: 172 DVGAGRTKAVQQDDGTWHIEGVKRFITSATSDDLFENIFHLVLARPEGAGPGTKGLSLFF 231

Query: 258 VPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
           VP+   D      G  NG+    +++K+G +++AT EL F        G+L+G+++    
Sbjct: 232 VPKFHFDFEKNELGERNGVFVTNVEHKMGLKASATCELTFGGHGTPAVGWLVGEVHNGIA 291

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVM 355
            + D+     +     ++S +      A+ YA++R                  +   P +
Sbjct: 292 QMFDVIEHARMMVGTKAISTLSTGYLNALDYAKQRVQGSDLTQMTDKTAPRVTITHHPDV 351

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---YARI----MAPITKYWCCKMA 408
           +R++A          A+    A   +   ++    A    A      + PI K    + A
Sbjct: 352 RRSLALQKAYAEGMRAVYLYTAAHQEPEMAQLVSGADEQLAHRVNDLLLPIVKGVGSERA 411

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFE 466
              + E+++ +GGSG++++  I ++ R+S  +S+  G+      D     +         
Sbjct: 412 YQYLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKIARDRGVALA 471

Query: 467 QLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLT-EKIALASSAAALYRAGMN 523
            +   +++ + S +G   +   R  +S   ED + +A  LT   +      + LY+ G+ 
Sbjct: 472 HVAGEIKKFIDSEAGNGRLKAERALLSTALEDVQAMAAVLTGHLMGAQEQPSELYKVGLG 531

Query: 524 DI 525
            +
Sbjct: 532 SV 533


>gi|146324137|ref|XP_753642.2| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|129558050|gb|EAL91604.2| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159126625|gb|EDP51741.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 647

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 114/557 (20%), Positives = 205/557 (36%), Gaps = 76/557 (13%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTP 82
           P      N Y++D+ L  L++ +        +   L  LGE  +S   +E +  A  + P
Sbjct: 21  PEPLQ--NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQP 78

Query: 83  QLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            +  Y   G+R+D  ++     W  L R     G+    +D S+    R     ++    
Sbjct: 79  YVKGYNVWGQRYDYDRLVTSEGWKQLSRWGARHGVVALGYDPSYGASRR----LVQYTVN 134

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           YL            ++T  + + L    + H       F   ++        +     G 
Sbjct: 135 YLYGPSSGLTSCPVAMTDGAALILSQQLQQHAFPEDHPFRVVFN--RLTSRNEDFWTSGQ 192

Query: 201 GLTEKRGGTDIAAITSQGQKI----------------------SDGIYCLSGHKWFLSSP 238
            +TE+ GG+D+    +                            +G Y +SG K+F S+ 
Sbjct: 193 WMTERAGGSDVQNTETWATHDPVPASSTASNNNITNNNPLGTLGEGEYSISGFKFFSSAT 252

Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLL--------EDGSPNGLCYQRLKNKIGNRSNATVE 288
            ++  ++LA+    G++  FL P                NG+   RLKNK+G +   T E
Sbjct: 253 DANVTLLLAKTAPSGKLSTFLAPLRRTITGPNQAPREVTNGVRIHRLKNKLGTKELPTAE 312

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           LE  +    L+G  +     +  +  +    + I S+   R +L+ A  ++R R   G  
Sbjct: 313 LELRDMRAHLVGPRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARAFSRARSTVGEP 372

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRL-------------ANSFDEAKSRSEEAAYARI 395
           L   P+  R +A++ +   AA  L F                 +         +A     
Sbjct: 373 LWLIPMHLRLLAEVEVRQRAAMQLGFFTVAVMGVVENPGDPGAAVPAHVPNGADATVVFR 432

Query: 396 -MAPITKYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNA 449
            +  ++K    KMA   I E  E +GG GY++     E +++R  R +  NSI  G+ N 
Sbjct: 433 ALTAVSKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTNV 492

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKEDKGL-------- 500
           +  +++  L    N F    + +E+ LG   G++V   L  + +  K             
Sbjct: 493 LASEMVRFLLAREN-FAVFAAWVERVLGMIRGERVAHALGMAWTAFKGKAAREVASVLAD 551

Query: 501 ARFLTEKIALASSAAAL 517
            R +   +A     A L
Sbjct: 552 GRRVMFTLAWILMGALL 568


>gi|254295199|ref|YP_003061222.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043730|gb|ACT60525.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 602

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 95/542 (17%), Positives = 188/542 (34%), Gaps = 70/542 (12%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYV---LSCTAQELARMANYNTPQLHAYGPGGE 92
               D +L      + +   + +  + +             A   + N P          
Sbjct: 17  LLDLDQMLQ--TDRYEAYDREAISAILDTAQAIAEDKYLTCASELDANEPTFDG------ 68

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             +KV   P     L+     G   + +D                A  +  A        
Sbjct: 69  --EKVSIMPEVGEALKAFADAGFFGASFDEDVGGAQLPGIVNFALAGFFSAANPGINSYA 126

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++ +A+M+  + +      +               PM +      + L+E + G+ ++
Sbjct: 127 FLTIGAANMLNAVGSQEQKDKYL-------------GPMLEGRWFGTMCLSEPQAGSSLS 173

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRL 261
            I ++     +G Y + G K ++S    +       ++LA++ G       +  F+VP+ 
Sbjct: 174 DIRTKATPTDEGHYLIEGSKMWISGGDHELAENIVEMVLAKIPGGPPGVRGISLFIVPKY 233

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMK 313
             +     G  N +    L +K+G+R      L F    +  G+L+G  +     +  M 
Sbjct: 234 RVNDDGSLGPKNDISLAGLNHKMGHRGTTNCLLNFGENGDCHGYLVGKPHEGLKSMFHMM 293

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADI 362
               +     SV         ++ YA  R                 +I+   +KR +   
Sbjct: 294 NEARIGVGQGSVMSALTGFLYSLKYAGERSQGRHPQDKDPTKPQIPIIEHTDIKRLLMAQ 353

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAM 416
              +  A+AL F   +  ++ K   ++      A    I+ P+ K W  +        A+
Sbjct: 354 KAAVEGASALLFYCMDLVEQQKLTDDKNEQMRLALLLEILTPLAKSWPSEFCLEANKHAI 413

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTN---LFEQLFS 470
           + +GG GY  E  + R+YR++  N I  G+     LD+L     +  G     L  ++  
Sbjct: 414 QILGGYGYTREFPVERYYRDNRLNHIHEGTHAIHGLDLLGRKVSMHDGAALNLLMAEVQK 473

Query: 471 TLEQDLG-SSGKKVITILRDSIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           TL +  G +S K+  T L  ++  L    K +     + I LA++   L   G   +A +
Sbjct: 474 TLAEVAGETSLKEYATALTGAVETLLDTTKTVKACENQNIQLANATIYLDAFGHVVVAWL 533

Query: 529 FL 530
           +L
Sbjct: 534 WL 535


>gi|56709072|ref|YP_165117.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56680757|gb|AAV97422.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 386

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CEGEQKERYLLPAVRGERMDALAMTEPGAGSDVRGMKCSAVRDG-GDWVVNGTKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+          +     +   L D    G   +     + +R    + LEF +
Sbjct: 160 DHADFIIVFIATGEDMTPKGPKKRITAFLVDRGTPGFTIRDGYRSVSHRGYKNMVLEFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A MSV   R     A++YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFAVMNEWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQAIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADWLTLAAAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 333 VTDTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|260219862|emb|CBA26819.1| Probable isovaleryl-CoA dehydrogenase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 338

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 127/338 (37%), Gaps = 16/338 (4%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P        +  +   +MA+      +     +  +   M TP + +       S E
Sbjct: 5   RGHPXXXXXXXGLDFSYSMVMAEALGDCNVGGVPMAIGVQTDMCTPALARFG-----SDE 59

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                 AP     +   +G++E  GG+D+AA+ +  +K            W  +   +D 
Sbjct: 60  LRNQYLAPAIAGDMVGCIGVSEVTGGSDVAALKTTARKDGGDYVINGSKMWITNGMQADW 119

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
             +LA             ++      G+  Q+++ KIG  S+ T +L F N        +
Sbjct: 120 CCLLANTSEGAVHKNKSLIIVPMDAPGITRQKIE-KIGMHSSDTAQLFFDNVRVPQRNLI 178

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  M       L  A  S+  +   +   I Y R+R   G  +++  V+   +
Sbjct: 179 GQEGMGFMLQMLQFQEERLYGAASSLRSLDNLINLTIDYTRQRQTFGQPILNNQVVHFRL 238

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  ++    AL++R    +   K  ++       +A + K    +++  V    ++  
Sbjct: 239 AELRTEVECLRALTYRAVEQYVGGKDVTK-------LASMAKLKAGRLSREVTDSCLQYW 291

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           GG G+  +  I++ YR+S   SI  G+   M+  +  L
Sbjct: 292 GGMGFTADNPISQAYRDSRLISIGGGADEIMLGIICKL 329


>gi|90417337|ref|ZP_01225263.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
 gi|90330922|gb|EAS46185.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207]
          Length = 390

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 139/376 (36%), Gaps = 33/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++WD+    P    L  ++   G+    +   F  V                  ++ 
Sbjct: 36  PFADQWDEDGALPD--ELWPKAAAVGILGLGYPEEFGGVSEG---------------IDI 78

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLT 203
            H  +++  +   ++  L  T  VH    P +    S         P+   +  I L +T
Sbjct: 79  WHKNILNEELARIAVGGLSATLMVHGIGLPPVLNFASEAIKQEVAPPVLAGTKRISLAIT 138

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A +T+  +   D  Y ++G K +++  M+  +   A   G  G   V  LL 
Sbjct: 139 EPGAGSDVAHLTTTARLDGDH-YVVNGSKTYITGGMNANWFTTAVRTGGEGAGGVSALLI 197

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
                G+    L  K G   + T  + F N       L+G  N     +        L  
Sbjct: 198 PADLEGVSRTALDKKQGWWCSDTATIYFDNVRVPAANLVGQENRGFSVIMTNFNAERLAM 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +    +  RV L +A+++ R R   G  L D  V++  IA++   I +      ++    
Sbjct: 258 SASMEAFSRVCLEDAVNWGRERKTFGQRLADHQVIRHKIAEMKQRINSTQCYLNQICAEV 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +  + + A  ++ +  T  +C         EAM+ +GG GY+    + R YRE   N
Sbjct: 318 QAGREYAGDIALLKVQSSQTMEFC-------AREAMQILGGMGYMRGNRVERIYREVRVN 370

Query: 441 SILLGSGNAMVLDVLN 456
           +I  GS   M      
Sbjct: 371 AIGGGSEEIMRDLAAR 386


>gi|290462991|gb|ADD24543.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
 gi|290561415|gb|ADD38108.1| Glutaryl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis]
          Length = 416

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 129/362 (35%), Gaps = 34/362 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              ++      G+                A+ + A  +  +       +   S      +
Sbjct: 72  HREIMSEMGEMGILGPTIQGYGCAGTSTVAYGLIAREVERVDSSYRSAMSVQSSLVMYPI 131

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           +   T      + P++ + E             +    GLTE   G+D +++ ++  K  
Sbjct: 132 SDFGTEEQKNKYIPRLATGE-------------IVGCFGLTEPNHGSDPSSMETKAVKNP 178

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           DG + ++G K W  +SP++D F++ A  E  +  FL+ + +E     GL   +++ K   
Sbjct: 179 DGSWTINGSKNWITNSPIADVFMIWAATEDGIQGFLLEKGME-----GLTAPKIEGKFSL 233

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
           R++ T  +   +    ++GD     G          L+SA   ++   +  AE     A 
Sbjct: 234 RASTTGMIFMEDV---VVGDEQRLPGVKGLRGPFSCLNSARFGIAWGVLGAAEFCLGAAR 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R+     L    ++++ +AD   +I         L    D  K           M
Sbjct: 291 QYTLDRYQFKKPLAQNQLIQKKLADALTEITLGLHACLHLGRLKDSGK-------LVPEM 343

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K   C  +  +     + +GG+G  +E  I RH     A +   G+ +   L +  
Sbjct: 344 ISILKRNNCGKSLDIARNCRDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALIIGR 403

Query: 457 LL 458
            +
Sbjct: 404 GI 405


>gi|222479568|ref|YP_002565805.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452470|gb|ACM56735.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 387

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 131/350 (37%), Gaps = 26/350 (7%)

Query: 115 LHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           +        +  +   Q  + +    L  ++        + +   A  + L  TP   ++
Sbjct: 56  MMGVPISEEYGGLGGDQLMYALVTEELGRVSGGIGLSYAAHTSLGAKPIELFGTPEQKEE 115

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK 232
           W               P+ +        LTE   G+D + + +  +  +D G Y L+G K
Sbjct: 116 WL-------------RPLAEGGKLGAWALTEPGSGSDASNMDTTAEYDADAGEYVLNGTK 162

Query: 233 WFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F+++  ++++ ++ A  +   G   +   + D + +G     + +K+G   + T E+  
Sbjct: 163 QFITNATVANSVLVKAVTDSDAGYDGISTFIVDPADDGFEVTTVWDKMGLNCSPTCEILL 222

Query: 292 SNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +        L     G  + MK L    +  A +SV   + +   A  YA  R   G  
Sbjct: 223 DDVRIPEDRLLGEEGEGWTQTMKTLDGGRISIAALSVGLAQGAYEAAKEYAGEREQFGKP 282

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     ++  +  +      A  L+ + A ++D     + E+A A++ A           
Sbjct: 283 IAKFDAIRDKVVHMHRQTERARLLTHKAATTYDAGNEVTRESALAKLDASEAA------- 335

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V  EA++ +GG GY  + +  R YR++    I  G+     + +   L
Sbjct: 336 REVAEEAVQTLGGYGYTTDFAPQRFYRDAKLMEIGEGTSEIQHVVLGREL 385


>gi|121713392|ref|XP_001274307.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus
           clavatus NRRL 1]
 gi|119402460|gb|EAW12881.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus
           clavatus NRRL 1]
          Length = 643

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 120/574 (20%), Positives = 210/574 (36%), Gaps = 76/574 (13%)

Query: 12  MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVL 66
           M+     +    A+  P      N Y+SD+ L  ++A +        +   L  LGE  +
Sbjct: 1   MDPAAHATADRGAITIPEPLQ--NTYTSDATLHRVLAWYLPSDINQSIQPNLTQLGEEAI 58

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           S   +E +  A  N P + +Y   G+R+D  ++     W  L R     G+    ++ ++
Sbjct: 59  SPQIREWSADAERNQPYVKSYNVWGQRYDYDRLVTSEGWKQLGRWGARHGVVAIGYEPTY 118

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
               R     ++ A  YL +          ++T  + + L    + H   A   F   Y 
Sbjct: 119 GASRR----LVQYAVNYLYSPSSGLTSCPAAMTDGAALILSQQLQQHSYPADHPFRAVYA 174

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ------------KISDGIYCLSGHK 232
                   +     G  +TE+ GG+D+    +                +SDG Y ++G K
Sbjct: 175 RLIS--RTEDCWTSGQWMTERAGGSDVQNTETWATYSPLPSSSSSSDALSDGAYTINGFK 232

Query: 233 WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLE--------------DGSPNGLCYQRLK 276
           +F S+  ++  ++LA+    G++  FL P                      NG+   RLK
Sbjct: 233 FFSSATDANVTLLLAKTSPSGKLSTFLAPLRRTIPIPAPTNPQTTTTKQVANGVRIHRLK 292

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           NK+G +   T ELE       L+G+       +  +  +    + I S+   R +L+ A 
Sbjct: 293 NKLGTKELPTAELELHGMRAHLVGEPEKGVATIAPLLNVTRTHTFIGSLGAWRRALSIAK 352

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-------DEAKSRSEE 389
            +AR R   G  L   P+  R +A++     AA  + F             D  +  +  
Sbjct: 353 AFARARSTVGEPLWLIPMHLRLLAELEARHRAALQVGFFTVAVMGAVENPADGGEGSARP 412

Query: 390 AAYARI----------MAPITKYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHY 434
           AA+             +    K    KMA   I E  E +GG GY++     E ++AR  
Sbjct: 413 AAHVPRGREATVVFRALTAAAKAVVSKMAVLGIQECQEALGGVGYMDEADEPEFNVARLL 472

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT--------- 485
           R +  NSI  G+ N +  +++  L    + F      +E+ LG    +            
Sbjct: 473 RNTAVNSIWEGTTNVLASELVRFLL-ARDHFAVFAGWMERVLGLLRAETAEAAALRRAWL 531

Query: 486 ILRDSIS-LCKEDKGLARFLTEKIALASSAAALY 518
             R  I+          R +   +A   + A L 
Sbjct: 532 AFRARIAGDVAAVLADGRRVMFTLAWILAGALLV 565


>gi|302526139|ref|ZP_07278481.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435034|gb|EFL06850.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 125/360 (34%), Gaps = 35/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL       G         +                  +  L    +        +M   
Sbjct: 44  ALEETGRRKGFWALEAPEEYGGQG--------------IGMLATCLVSEELFKHPAMFEF 89

Query: 165 MTTPRVHKDWAPKIF--SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +P       P ++  S E       P+ K ++      TE  GG+D+AAI +  ++  
Sbjct: 90  GGSPE------PVLYECSDEQKQRFLFPVIKENLRCCYAFTEPGGGSDVAAIRTTAERKG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + ++G K F+S      F++  A  +   G   V   L +    G    R    +G+
Sbjct: 144 D-TWVINGVKTFISYAERAGFVILFATTDRARGAKGVTCFLVEKGTPGFSLSRPIPTMGD 202

Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                 +L F +        LG +        +      L  A   +   +  L  A+ +
Sbjct: 203 DWEPH-QLTFEDCVIPDANRLGPVGGGWKLAVEQLTHGRLKIAAYQLGIAQRCLDIAVEW 261

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +  +  ++  +AD A ++ AA  L++R A  +D+ K    EA  A     
Sbjct: 262 ARNRTTWGKPIASRQAVQWMVADSATELDAARLLTYRAAWLYDQGKRSETEAFMA----- 316

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +MA  V    ++ +GG GY +E  I   YR+     I  G+       +   L
Sbjct: 317 --KLYATEMAQRVTDRCLQILGGLGYSKELPIQSFYRQVRVWRIGHGTSEIHRWMIARDL 374


>gi|27378415|ref|NP_769944.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351563|dbj|BAC48569.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 387

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 14/290 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237
              +       P  K      + +TE   G+D A+I++      D  + L+G K F+S  
Sbjct: 103 CKGDQVERYLLPTVKGDKICAMAITEPGAGSDAASISTTAHLEGD-QWVLNGTKHFISDG 161

Query: 238 PMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            ++D  I++A  +        +   L D    G    R +  +G+R     EL F +   
Sbjct: 162 DIADYVILMALTDKEKRARGGITLFLADRGTPGFKVARTQPMMGHRGYGHAELAFEDCRI 221

Query: 297 F---LLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               +LG++      +    + I L      +V   + +L     +A  R   G ++ D 
Sbjct: 222 PKAAVLGEVGGGFKLIMQSVLQIRLAHIGARAVGMAQRALEMMRKHAGERRQFGQLIGDF 281

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            ++++ IAD A +I     +    A   D+ +        AR    + K    +M   V+
Sbjct: 282 QMVQKLIADSATEIFGVKMMVMNAAWDIDQGRD-------ARDKVSMIKVAASEMQGRVV 334

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             A++  GG G+ ++  + R YR++    I  G+     + V     K  
Sbjct: 335 DRAIQVFGGMGFSKDLPLERMYRDARVTRIYDGTSEIHRMLVARSTIKNG 384


>gi|229541767|ref|ZP_04430827.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
 gi|229326187|gb|EEN91862.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1]
          Length = 389

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 117/373 (31%), Gaps = 37/373 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +                 L  +L    +      SA  + 
Sbjct: 48  KNLQEKAKAAGFWGINTPEEYGGANLGPVMTA-----LLQMELGRTFVPFSFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +               P+          LTE   G+D A I     K  D
Sbjct: 103 YDCNEEQKQKYLI-------------PVINGERRSCFALTEPGAGSDAANIKMTAVKDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGN 281
             + L+G K F+++   +D  ++ A  +   G    V   L D              +G 
Sbjct: 150 H-WVLNGEKVFITNGNEADFAMVFAVTDKEKGANGGVTCFLVDRDMG--WRSEYIQTMGE 206

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIH 337
              A+  L F +        L  +  G    MK      +L  A  +V      L  A+ 
Sbjct: 207 WGPAS--LVFEDVRVPEANILGELGKGFSLGMKWIGQGRWLIPAR-AVGASERLLQMAMD 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  + ++  ++  IAD  ++I A   L    A   +  K         R  A
Sbjct: 264 YAKTRVTFGKPIAERQAIQWMIADSNVEIEATRWLVLHAAWLSETGKDN-------RHYA 316

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +   MA  V+   ++  GG GY +E  I R YRE     I  G+       +   
Sbjct: 317 SIAKLYGSNMANRVVDRVLQIHGGMGYTKELPIERWYREMRLWRIFEGTDEIQRYIISRN 376

Query: 458 LEKGTNLFEQLFS 470
           L +G     +L  
Sbjct: 377 LLRGHVKVGELMD 389


>gi|218781749|ref|YP_002433067.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763133|gb|ACL05599.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 380

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 133/371 (35%), Gaps = 28/371 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W++    P      R+    G  C    + +        + +                M
Sbjct: 31  EWEEAHIVP--KEAWRKLGEAGYLCPCIAKEYGGPGLDFRYTVIITEEMAAIGQAGLAAM 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S      +    T    K + P   S E             +   + +TE   G+D+ 
Sbjct: 89  LHSDVVVPYINTYGTEEQKKKYLPGCVSGE-------------IITAVAMTEPGAGSDVG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGL 270
            + +  ++  D    ++G K F+S+ ++   ++LA     +      V   L +    G 
Sbjct: 136 GLEATAEEDGDE-IVINGVKTFISNGINCDLVVLAARNPEIADKHAGVSLYLVEDGTPGF 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSG 327
              +  +K+G  S  T EL FSN        L     G +  M+ L    L SAI +V+G
Sbjct: 195 TRGKHLDKMGMHSQDTAELFFSNCRIPKENILGQKGHGFLMLMEKLQQERLMSAIANVAG 254

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A+ YA+   V G  L     +K  +A+IA +++        L       K  +
Sbjct: 255 AENALKWAVAYAKETMVDGKPLSKSQAVKFKLAEIATEVSMNRVFLDHLIEEHIAGKDVT 314

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                   +  ++K+   +M    +A+ ++  G  G +E   IA+ +R+S   +I  G+ 
Sbjct: 315 A-------LTMMSKFASSEMMNTQLADIIDIFGEYGLLESGPIAKGFRDSRITTIFAGTT 367

Query: 448 NAMVLDVLNLL 458
             M   +   +
Sbjct: 368 EIMKTIIAKSM 378


>gi|325518876|gb|EGC98439.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 385

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 103/281 (36%), Gaps = 16/281 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +        LTE   G+D   I ++  +  D  Y ++G K F+S  
Sbjct: 101 CKGDQIERYLKPTVRGERVDCFALTEPGAGSDAMGIRTRAVRDGDD-YVINGSKHFISHA 159

Query: 239 MSDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            +  F++L  V G           V   L D    G+  +R  +    R     E+  S+
Sbjct: 160 DTADFVILFAVTGEEDVRGQKRKRVTCFLIDKDTPGMTVRRGPHCTSLRGYHQSEIFLSD 219

Query: 294 TFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+ +       D      +  A  ++   + +   A  +A  RH  G  + 
Sbjct: 220 CRVSAAQILGEEHRGFELANDWLTAGRVMVAANNIGRAQRAFEMAAEWAATRHQFGKRIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D       +AD+  +I AA  ++   A   D+      +AA A+++A        +    
Sbjct: 280 DFQGTSFKLADMQTEIRAAELVTLYTAQKLDQGTMTDGDAALAKLLA-------TETLGR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           V   A++  GG G ++E  I R +R++    I  G+     
Sbjct: 333 VTDHAVQIYGGMGLMDELPIERFWRDARIERIWEGTSEIQR 373


>gi|296167526|ref|ZP_06849878.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897148|gb|EFG76757.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 611

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 97/520 (18%), Positives = 194/520 (37%), Gaps = 68/520 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
               + L  +        A+      + N P    + P       V    A+   +R   
Sbjct: 36  DTAREMLSEISRLAEGPIAESFVE-GDRNPPV---FDPKTH---SVTLPEAFKKSVRAVT 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D     +   +A  + A   +L+    A  +       A+++  + T    
Sbjct: 89  EAGWDKVGIDEVLGGMPMPRA-LVWALHEHLLGANPAVWMYGGGAGFANILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  K  DG + + G 
Sbjct: 148 K-WAVICAERGWGST-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  F VP+ L D      G  NG+   
Sbjct: 194 KRFITSADSGDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELSFGQHDVPAKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALEYAKSRVQGADMTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKSRSE---EAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A + +    +A  A      M P+ K    + A A + E+++  GGSG++++  I
Sbjct: 374 TYQDAAVAEAVHGVDAELAVKVNDLMLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGS-SGKKVITIL 487
            ++ R++  +S+  G+      D     ++         +   +++ + S SG   +   
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIIRDKGVALAHVSGEIQKFVDSESGNGRLKSE 493

Query: 488 RDSISLCKED-KGLARFLTEK-IALASSAAALYRAGMNDI 525
           R+ ++    D + +A  LT   +A      +LY+ G+  +
Sbjct: 494 RELLAKALADVQAMAATLTGYLMAAQEDVTSLYKVGLGSV 533


>gi|264676292|ref|YP_003276198.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262206804|gb|ACY30902.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 382

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 131/392 (33%), Gaps = 31/392 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A  +AR A           P  +  D+  F    H  +      G+        F   
Sbjct: 14  AVADAVARFAE------ETLAPVAQAMDEEAFSATRH--VPGLSALGVMGMNLPERFGGP 65

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  + +      A      ++         V +       + W P+  S E+    
Sbjct: 66  GVTPTAMLMSLVAISRACAATSSMIGAHYLGTDAVLIAGDETQREQWLPRCASGEW---- 121

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                         LTE RGG+  A + ++  +  D         +  ++  +   ++ A
Sbjct: 122 ---------LAAFALTEPRGGSHPADMRTRAVRDGDDYLITGVKHFISNAAEARFMVVFA 172

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VST 306
           + +       V   +      G+     +  +G R     E+   +        L    +
Sbjct: 173 KTDAEAAARGVSAFIVPRDLPGIQVSSPEKLMGIRGGHAFEVSLDSVRVPAANRLGAEGS 232

Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    MK+L    LD A  S+     +L  A  +A +R V G  +  +  ++  +AD+ L
Sbjct: 233 GFKTAMKVLDNSRLDVAATSLGIAEAALKAAADWANQRLVGGEPIAVKQGIQFKLADMKL 292

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA AL+ +      + +  ++++A A       K +  +M   V  EA++  GG GY
Sbjct: 293 RLEAAWALTMQALALRQQGQPFTQQSAMA-------KLFASEMVGFVTDEALQIHGGYGY 345

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             E  + R+ R++    I  GS       +  
Sbjct: 346 TREMPLERYVRDARILRIYEGSSEIQRTIIAR 377


>gi|328770903|gb|EGF80944.1| hypothetical protein BATDEDRAFT_24489 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 406

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 128/370 (34%), Gaps = 29/370 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D          ++      GL  +  D      V   A+ + A  +  +       +  
Sbjct: 51  IDAYRNEDFAREIMSEMGELGLLGATIDGYGCSGVSSVAYGLIAREVERVDSGYRSAMSV 110

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +    T +  + + P + +                    GLTE   G+D   
Sbjct: 111 QSSLVMYPIYAYGTEKQREKYLPDLATG-------------KKIGAFGLTEPNHGSDPGG 157

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++  K+           W  +SP++D F++ A+ +       +   + +    GL   
Sbjct: 158 METRATKLGGTYVLNGSKTWISNSPIADVFVVWAKTDDNE----IRGFILERGMPGLETP 213

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +K K+  R++ T  +   +    +   L +  G          L++A   ++   +  A
Sbjct: 214 TIKGKLSLRASCTGMIMMDDVEIPVSNMLPLVKGLKACTGPFGCLNNARFGIAWGALGAA 273

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E     A  Y   R   G  L    ++++ +AD   +I  AT  ++++    D+ K+   
Sbjct: 274 ESCVESAREYVLNRKQFGVPLARFQLIQKKLADAVSEIGLATMAAYQVGRLKDQDKA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M    K   C  A A+  +  + +GG+G  +E  I RH     + +   G+ +
Sbjct: 331 ----APEMISTVKRNSCGKALAIARDCRDMLGGNGISDEYHIIRHAMNLESVNTYEGTHD 386

Query: 449 AMVLDVLNLL 458
              L +   +
Sbjct: 387 VHALIIGRAI 396


>gi|6959522|gb|AAF33139.1|AF196567_15 putative acyl-CoA dehydrogenase [Pseudomonas stutzeri]
          Length = 513

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 62/293 (21%), Positives = 121/293 (41%), Gaps = 19/293 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237
            + E          +  + + + ++E   G+D   I +   K     + L+G K F+S +
Sbjct: 234 CTGEQREKYLHAAMRGDIHVSVAMSEPEAGSDANGIRT-AVKRDGCEWILNGSKHFISDA 292

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG- 296
            ++ A+I+ A+ E  + CFLV     D    GL    ++  +G+R      L F++    
Sbjct: 293 DIASAYIVTARSEEGISCFLV-----DRDTPGLELGPIQEMMGHRGTHQHGLFFTDCRIA 347

Query: 297 --FLLGDLNVSTGPVEDMKILIYLD-SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              LLG+       V     +  L      +V      L  ++ +A++R   G  +    
Sbjct: 348 PQQLLGEPGRGMSLVLGHLNVARLAYVGARAVGMASKLLEMSVDFAKQRSQFGAPIGSFQ 407

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           ++++ +AD+  +I  A  +    A   D+ +   E+         + K +  +M   V  
Sbjct: 408 MVQKMLADMQCEIYGARMMLLNAAWEIDQGRDVREK-------VSMVKLFASEMLGRVAD 460

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNLF 465
            A++  GG GY  E  I R+YR++    +  G+     ++    LLE+G +L 
Sbjct: 461 SAVQIFGGMGYCTELPIERYYRDARVFRLYDGTSEIHRIMIARRLLERGISLL 513


>gi|297171157|gb|ADI22167.1| acyl-CoA dehydrogenases [uncultured gamma proteobacterium
           HF0200_24F15]
          Length = 395

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 79/424 (18%), Positives = 154/424 (36%), Gaps = 45/424 (10%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
             P ++ ++L    E ++    Q   +  +     L A+    ER+D+  F       + 
Sbjct: 12  RDPLLIDEDLTEE-ERIVRDNVQRYCQE-HLQPRILKAH--REERFDREIFSEMGKLGML 67

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            S+ DG  C+  +     ++ ++  ++ ++    M+   +  +          +    + 
Sbjct: 68  GSVLDGYGCAGLNYVSYGLIAREVERVDSSYRSAMSVQSSLVMYP--------IYAYGSE 119

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P++ + E             V    GLTE   G+D   + S  + +  G Y  
Sbjct: 120 HQRQKFLPRLATGE-------------VIGCFGLTEPDFGSDPGGMKSHARGVEGGFYVS 166

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  ++P++D F++ A+ E  V    +   L +    GL   R++ K   R++ T E
Sbjct: 167 GTKTWITNAPIADVFVVWAKDEEGV----IRGFLLERGMPGLVTTRIEGKFSLRASETGE 222

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRH 343
           +   N F     D NV  G          L+ A   ++   +  AE   +A       RH
Sbjct: 223 ISMDNVFVP---DENVFNGVHGLRGPFACLNLARFGIAWGAMGAAECCWHASRNYTLERH 279

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L    ++++ +AD+  +I        RL   FD      E  +  +         
Sbjct: 280 QFGRPLAANQLVQKKLADMQTEITLGLTGCLRLGRLFDAGHRLPEAVSLLKR-------N 332

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            C  A  +   A +  G +G  +E  + RH     A +   G+ +   L +L   + G  
Sbjct: 333 NCGKALDIARVARDLHGANGISDEYHVIRHVLNLEAVNTYEGTHDIHAL-ILGREQTGIQ 391

Query: 464 LFEQ 467
            F  
Sbjct: 392 SFSA 395


>gi|239930100|ref|ZP_04687053.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291438439|ref|ZP_06577829.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291341334|gb|EFE68290.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 608

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 94/555 (16%), Positives = 189/555 (34%), Gaps = 79/555 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P            ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFADADRNPPV---FDP---ETSTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTAPRSLIWAYAELILGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNEVQKHIAKFATEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+ L D      G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYLFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKSAPKVTITHHPDVRRSLMTQKAYAEGMRALVMYTAS 372

Query: 379 SFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D         +  S + A   ++ PI K +  + A   +A++++  GGSG+++E  I 
Sbjct: 373 IQDAIQVKEANGEDASADHALNDLLLPIVKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R+S  +++  G+      D     ++         L   +++   LG+ G+++ T  
Sbjct: 433 QYIRDSKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSLAEDIKKFLALGTGGEELATAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   +   +A        +Y+ G+N         R L         + 
Sbjct: 493 EHLAKAAVELEAIVGLMLTDLAATEQDVKNIYKVGLNT-------TRLLMASGDVVVGYL 545

Query: 544 MLHGRFNAAHIIDSL 558
           +L G   AA  + + 
Sbjct: 546 LLKGAAVAAEKLQTA 560


>gi|111022170|ref|YP_705142.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821700|gb|ABG96984.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 611

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 92/511 (18%), Positives = 184/511 (36%), Gaps = 71/511 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       V    ++    R       +      
Sbjct: 46  ARLAEGPLGESFADADRNPPV---FDPENH---TVTLPESFKKSFRALWDAEWYRMGLSE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               V   ++     + L L AQ  A H+       A ++    T    K WA     R 
Sbjct: 100 EIGGVPVPRSVVWAISELILGAQPAA-HMYQAGPAFADVLFHNGTEEQKK-WAATCVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S  SD 
Sbjct: 158 WGAT-------------MVLTEPDAGSDVGASRTKAIKQDDGSWHIEGVKRFITSADSDD 204

Query: 243 ------FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG   G   +                 G  NG+    +++K+G + +
Sbjct: 205 LFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETNELGERNGVFVTNVEHKMGLKVS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           AT E+ F        G+L+G+++     + D+     +     +++ +      A+ YA+
Sbjct: 265 ATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALDYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            R                  +   P ++RA+A          A+    A   DEA ++  
Sbjct: 325 ERVQGADLTQMTDKAAPRVTITHHPDVRRALAMQKAYAEGLRAVYLYTAAHQDEATAKLV 384

Query: 389 EAAYARI-------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             A   +       + PI K    + A   + ++++  GGSG++++  I ++ R++  +S
Sbjct: 385 SGADKDLAFRVNDLLLPIVKGVGSERAYQYLTDSLQTFGGSGFLQDYPIEQYIRDAKIDS 444

Query: 442 ILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  G+      D        ++G  L     ++   ++ + G+   K    L    +  +
Sbjct: 445 LYEGTTAIQAQDFFFRKIARDRGVALAHVAGEVKKFIDSEAGNGRLKAERAL--LATALE 502

Query: 496 EDKGLARFLTEK-IALASSAAALYRAGMNDI 525
           + + +A  LT   +      + LY+ G+  +
Sbjct: 503 DVQTMAATLTGYLMGAQEQPSELYKVGLGSV 533


>gi|260575697|ref|ZP_05843694.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259022095|gb|EEW25394.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 379

 Score =  222 bits (567), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 16/340 (4%)

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
           ++ +         +      +   L+  +E       S  SA     + T  +       
Sbjct: 47  ALAETGMLGANLPEPWGAGISAQALLKAVEIVAGACGSTVSALTAHYLATDSLLHGGDDA 106

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           I +R             +      LTE   G+D A + S+  +   G +      +  + 
Sbjct: 107 IRAR-----YLPAAAAGTSLGAFALTEPNAGSDPADMRSRATRTPQGYHLKGRKCFISNG 161

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D  ++ A  +   G   +   + D    G    R +  +G R     EL+F +    
Sbjct: 162 GVADFVVVYAVTDPAAGHRGISAFVVDKGTPGFTPGRAEQTMGLRGGHVWELDF-DCHLP 220

Query: 298 LLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L    +G    MK+L    ++ A M +   + +L  A  +A+ R + G  L D+  
Sbjct: 221 ETQRLGQEGSGFKTAMKVLDAGRVEVAAMCIGIAQQALDLATQWAKTRIIGGAPLADRQG 280

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +AD+ALD+ +A  L+   A      +  S  A+ A++ A        +MA  V   
Sbjct: 281 IRWQLADMALDLQSARLLALEAARQRQNHERFSLAASMAKLHA-------SEMAHRVTDA 333

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           A++  GG GY  +  + R  R+     I  GS       +
Sbjct: 334 ALQLHGGYGYTRDFPLERLARDVRIMRIYEGSSEIQRNII 373


>gi|290997840|ref|XP_002681489.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
 gi|284095113|gb|EFC48745.1| glutaryl-coenzyme A dehydrogenase [Naegleria gruberi]
          Length = 431

 Score =  222 bits (567), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 60/370 (16%), Positives = 128/370 (34%), Gaps = 35/370 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           K  F P    ++R     G+                A+ + A  +  +       +   S
Sbjct: 84  KEHFDP---EIMREMGEMGMLGINIHGHGCAGASNVAYGLVAREVERVDSGYRSAMSVQS 140

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +         + + PK+ + E             +    GLTE   G+D +++ 
Sbjct: 141 SLVMHPINQWGNEAQKQKYLPKLATGE-------------LIGCFGLTEPNHGSDPSSME 187

Query: 216 SQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           ++ +    G Y        W  +SP++D F++ A+ E   G   +   + +    GL   
Sbjct: 188 TKAKLSQCGKYYILNGSKMWITNSPIADIFVVWARSEAHEGK--IKGFILEKGMKGLTAP 245

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +++ K+  R++ T  +   +    +    N+             L+SA   ++   +  A
Sbjct: 246 KIEGKMSLRASITGSIGMDDVHVPV---ENLLPHASGLGGPFSCLNSARYGIAWGALGAA 302

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E   +  R     R   G  L    + ++ +AD+  +I+       +L    D+ +    
Sbjct: 303 EYCFHTARQYQIDRKQFGRPLAQNQLPQKKMADMLTEISLGLVSCVQLGRLKDKGE---- 358

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              +A  M  + K      A  +     + +GG+G  +E  I RH     + +   G+ +
Sbjct: 359 ---WAPEMISMLKRNNAGKALEIARVCRDMLGGNGIADEYHIIRHSANLESVNTYEGTHD 415

Query: 449 AMVLDVLNLL 458
              L +   +
Sbjct: 416 IHALILGRSI 425


>gi|116254816|ref|YP_770652.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259464|emb|CAK10602.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 386

 Score =  222 bits (567), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 98/290 (33%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++       L+G K F+S  
Sbjct: 101 CEGEQRERYLLPAVRGEKIDALAITEPDAGSDMRGMKCAARRDGSDF-VLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G    +  + + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILKGYDSVSHRGYHNSTLSFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R      + YA  R   G  + 
Sbjct: 220 CRIPGSQVLGEVHRGFEIANQWLYGTRLTVAATCVGRARRVFDMTLPYAAERKQFGKPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D   S       A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAADWLTLAAAWRLDAGLS-------ADRQIASAKLYSSEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|257056614|ref|YP_003134446.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586486|gb|ACU97619.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 394

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 125/363 (34%), Gaps = 26/363 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 44  DLRAQAAEMGLFGYAIPQRWGGLGLDLVQDVEVAMELGYTSLALRSMFGTNNGIAGQVLV 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P+I S E             V     LTE   G++ A + +      +
Sbjct: 104 GFGTDEQKRRWLPRIASGE-------------VVASFALTEPGAGSNPAGLRTTATADGE 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNR 282
           G       ++  ++  +  F++ A++         +   L  G   G+       K+G  
Sbjct: 151 GWVIDGTKQFITNATEAGLFVVFARMRPAPDPGNDIAVFLVPGDAPGVQVGAHDTKMGQE 210

Query: 283 SNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338
            + T E+ FS         +      G    M  L    +  A ++V   + +L E++ Y
Sbjct: 211 GSRTAEVTFSRVRVGPEALVGADGGIGYRAAMTSLARGRIHIAGLAVGCAQRALDESVSY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G ++ D  +++  +AD    + A  AL    A  +   + R       RI   
Sbjct: 271 AASATQGGTVIGDFQLVQAMLADQQTGVLAGRALVRDAARKYVSGEDR-------RIAPS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA      A++  GG+GY+    + R YR+     +  G+     L +   L
Sbjct: 324 AAKLFCTEMAGKAADLAVQVHGGAGYMRGVPVERLYRDVRLLRLYEGTSEIQRLIIGGGL 383

Query: 459 EKG 461
            + 
Sbjct: 384 VRA 386


>gi|256392406|ref|YP_003113970.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256358632|gb|ACU72129.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 386

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 149/400 (37%), Gaps = 41/400 (10%)

Query: 71  QELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           +E+ R   A    P    +   G          A      R    GL        +    
Sbjct: 14  REMIRDFIAEEVVPVYPEWEKRGH---------APREFYYRLGELGLFGIEVPEEYGGAG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPT 186
                K +A     + +       S   T   +  LM     +  + W P   S      
Sbjct: 65  EANGFKYQAVTTEELMRAGVSFGGSSVHTGLVLPYLMEFADAKQKQRWLPDFVSG----- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFI 244
                   ++   + +TE   G+D+A I +  +   DG  Y L+G K F++  + +D  +
Sbjct: 120 --------AMMTAIAMTEPGTGSDLAGIKTTAKLSEDGTHYVLNGAKTFITGGVLADRVL 171

Query: 245 MLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           ++A+    +       +  L+ D    G    R   KIG R++ T EL F++       L
Sbjct: 172 VVARTAPHDPDNRRAGLSILVVDTKSEGYVVGRKLEKIGLRTSDTAELSFTDVKVPVEDL 231

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG+   +   +    I   L  A+ +V+    ++  AI Y + R V G  +      K  
Sbjct: 232 LGEEGKAFSYLTHNLIPERLGIAVSAVAAADAAIQFAIGYTKERDVFGTPVASFQNTKFV 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+ + +++A  A+  R  + ++  +    +AA         K +  +MA  VI + ++ 
Sbjct: 292 LAECSSEVSAGQAMIDRAMDLYEADELSVADAA-------SVKLFTTEMAGRVIDKCLQL 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY+ E  IA+ Y ++    I  G+   M   V   L
Sbjct: 345 HGGYGYMLEFPIAKLYTDNRVFRIYGGTSEVMKSVVAKSL 384


>gi|157871974|ref|XP_001684536.1| acyl-coa dehydrogenase [Leishmania major strain Friedlin]
 gi|68127605|emb|CAJ05708.1| putative acyl-CoA dehydrogenase [Leishmania major strain Friedlin]
          Length = 629

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 82/475 (17%), Positives = 163/475 (34%), Gaps = 61/475 (12%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V     +    +     G         +       +       +   A          S+
Sbjct: 101 VTTPNGFKEAYQALTAGGWTGINEAEKYGGQALPLSVGFTTREMMATANWGFSMYSGLSL 160

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +   +    +  + + + PK+ S E+  T             + LTE + GTD++ + +
Sbjct: 161 GACRTLMAWASDELKEQYLPKLVSGEWSGT-------------MCLTEPQCGTDLSQVRT 207

Query: 217 QGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLLED 264
           + +   +G  Y ++G K F+S+   D       ++LA++         +  FLVPR + +
Sbjct: 208 KAEPSGNGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSLPSTKGLSLFLVPRHVVN 267

Query: 265 GS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
                     +    L+ K+G + ++T +L F N+ G+L+G+ +     +        + 
Sbjct: 268 DDGSLEAAKNVECIALEKKMGIKGSSTCQLSFHNSVGYLIGEPSAGMKQMFTFMNAARVG 327

Query: 320 SAIMSVSGMRVSLAEAIHYARRR---HVSGG---------ILIDQPVMKRAIADIALDIA 367
            A+  V    ++    + YAR R      GG          +I    +++ +        
Sbjct: 328 CALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRIIYHANVRQNVLFAKAIAE 387

Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421
              AL   +    D   +  + A             PI K    +      +  ++  GG
Sbjct: 388 GGRALLLDVGRLMDLHAAAPDAATADALDHEIGFYTPIAKACVTEWGVEAASRLLQVWGG 447

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL---FSTLEQD 475
            GYI+   + +  R+S   ++  G+     LD +    L  KG N  ++     S L + 
Sbjct: 448 HGYIKGNGMEQILRDSRIGTLYEGTTGVQALDFIGRKVLSTKGGNQAKRFGKRVSKLARA 507

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
              S   +    R    + K+     R  T +I L    A   R      ++ FL
Sbjct: 508 HMLSTGGLARYGRQLWLMQKQW----RIATTRIGLM---ALKNRDAAAASSEDFL 555


>gi|323360059|ref|YP_004226455.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323276430|dbj|BAJ76575.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 386

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 132/364 (36%), Gaps = 34/364 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVA 163
            L+ +    GL    +           A    A   +  + Q  A  L +     A  + 
Sbjct: 44  DLVAQMGELGLFGLPFPEEVGGQGGDYASLCVAIEGIARVDQSMAITLEAGVGLGAMPLY 103

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     ++ P + +                  G GLTE   G+D  A  +  +    
Sbjct: 104 RYGTDAQKAEYLPDLVAG-------------RALAGFGLTEAEAGSDAGATRTTARLEG- 149

Query: 224 GIYCLSGHKWFLSSPMSDA--FIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIG 280
           G + + G K F+++  +    F+ +  V GR G    +  ++      G       +K+G
Sbjct: 150 GEWVIDGSKQFITNSGTAITRFVTVTAVTGRTGERPEISTIIVPNGTPGFTVGPAYDKVG 209

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAE 334
             ++ T  L F         + N+     +  K  +  LD   ++++ +        L  
Sbjct: 210 WNASDTHPLTFDGVRVP---EANLLGERGQGFKNFLRTLDEGRVAIAALATGAAEGCLEA 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YAR R V G  L  +  ++  +A +   +  A       A   D  K  S +AA A+
Sbjct: 267 AVDYARSRTVFGERLSTRQSIQFLLARMHARVHTARLAWVHAARLCDAGKPFSVDAAVAK 326

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + A          A A   +A +  GG+G+I E  +ARHYR+S    I  G+    ++ +
Sbjct: 327 MTA-------SDAAMANARDATQVFGGNGFINEYPVARHYRDSKILEIGEGTTEVQLMVI 379

Query: 455 LNLL 458
              L
Sbjct: 380 SRAL 383


>gi|21219719|ref|NP_625498.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256789196|ref|ZP_05527627.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289773089|ref|ZP_06532467.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|9716193|emb|CAC01491.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289703288|gb|EFD70717.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 408

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 133/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDSTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPDLGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 ATPGLSQGQKFKKHGIRASHTAEVVLDNVRVPGSCLLGGKEKLDARLARAREKAKKGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALEYAQTREQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 SIDAARLLVWRASWMAINGKPFTAA------EGSMSKLFASETAKKVTAQAVQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R+S   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 402


>gi|254245716|ref|ZP_04939037.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124870492|gb|EAY62208.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 609

 Score =  222 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 103/571 (18%), Positives = 193/571 (33%), Gaps = 90/571 (15%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD--KVE 98
           LL   +     V                     R+A +   P          R+D  +V 
Sbjct: 13  LLYDWLDAEALVALPHYAEHSRETFDAVLDTSERIAEDLFAPHAARGDREEPRFDGERVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P     +R     GL  +  D +   +   +  +  +   +  A +        +V +
Sbjct: 73  LIPEVEPAVRAFADAGLIAAGHDEALGGMRLPKLVEAASFLFFQAANIATAAYPFLTVAN 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+++    +      +A              P  +      + L+E + G+ ++ I ++ 
Sbjct: 133 ANLLVAHGSAAQIDAFA-------------RPELEGRFLGTMCLSEPQAGSSLSDIATRA 179

Query: 219 QKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----------CFLVP 259
               D      Y L+G+K ++S    +       ++LA++    G           F+VP
Sbjct: 180 DFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDEHGRLLPGTRGISLFIVP 239

Query: 260 RLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEFS-----------NTFGFLLGDL 302
           + L   DG  NG    +    L +K+G R      L F               G+L+G  
Sbjct: 240 KFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRYRPEGRAGAIGYLVGRP 299

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------------GGIL 349
           N     +  M     +     +V+        A+ YAR R                   +
Sbjct: 300 NHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKDAAAPQAPI 359

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAPITKYW 403
           +D P ++R +      +    AL+   A   DEA++  + A  A       I+ PI K W
Sbjct: 360 VDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHDDAAVRAEATRLLDILTPIAKSW 419

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L    K T 
Sbjct: 420 PSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLG--RKVTQ 477

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE--------------KIA 509
                   L+  +G++ ++   +       C++   LAR                  +  
Sbjct: 478 DDGASLRALDARIGATVERARAL---DAGACEQADALARRWARLCDVTHQLSAIGDPQTR 534

Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           LA+++  L   G   +A ++L+     + H 
Sbjct: 535 LANASVYLEAFGHLVVAWLWLDVTLAAHGHD 565


>gi|256421270|ref|YP_003121923.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256036178|gb|ACU59722.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 392

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 122/338 (36%), Gaps = 38/338 (11%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIF 179
           P           A   +M +LE G     S  S         +         + + PK+ 
Sbjct: 69  PQEYGGGGMDHIAYGLMMQELERGDSGVRSTASVQGSLVMYPIFTYGNEAQKRKYLPKLA 128

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                 GLTE   G+D  ++ +  +   D +       W  ++P 
Sbjct: 129 SGEWMG-------------CFGLTEPDFGSDPGSMITHFKDAGDHVILNGAKMWISNAPF 175

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +   ++ A+ E       +  L+ +    G      K K   R++AT EL F N      
Sbjct: 176 AQIAVVWAKDEEGK----IRGLIVERGMEGFSTPETKGKWSLRASATGELVFDNVKVPKE 231

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354
             L  + G       L  L SA   ++      A      A+ YA+ R   G  +    +
Sbjct: 232 NILPDAKGLK---GPLSCLSSARYGIAWGVTGAAMDCYDIALRYAKERIQFGKPIAGFQL 288

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            ++ +A++  +I  A  +++RL    +E K+ + + + A+  A       C++A  +  +
Sbjct: 289 TQKKLAEMVTEITKAQLMNWRLGVLKNEGKATAAQISMAKRNA-------CEIATRIARD 341

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A + +GG G   E  I RH     +     G+    +L
Sbjct: 342 ARQILGGMGITGEYPIMRHMMNLESVITYEGTHEIHLL 379


>gi|226358172|ref|YP_002787911.1| glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319815|gb|ACO47809.1| putative glutaryl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 386

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 132/377 (35%), Gaps = 41/377 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE WD  E       L+R     GL        +       ++    A +Y + + ++
Sbjct: 33  RIGEWWDSGELP--VRELMRELGAQGLLGPTTPEEYGGAG--ASYSAYGAMMYELERCDS 88

Query: 149 GHLMSPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           G   + SV        +    +    + + P + S E             +    GLTE 
Sbjct: 89  GLRSAASVQGSLVMYPILTYGSEEQKRQYLPGLASGE-------------LIGCFGLTEP 135

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED 264
            GG+D  A+ ++ ++  D         W  +SP++D  ++ A+ + G V  F+VPR    
Sbjct: 136 DGGSDPGAMRTRARRDGDDYVLNGNKMWITNSPVADFAVVWAKDDEGVVRGFIVPR---- 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G    ++  K+  R++ T E+   +        L  S G       L  L SA   
Sbjct: 192 -DARGFSTPKIHRKMSLRASVTGEIVLQDCRIPAANLLPGSGGLKS---PLSCLTSARYG 247

Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   +   E     A+ Y   R   G  +  + +++  +  +  D  A   L+ +L   
Sbjct: 248 IAWGAMGALESVYETALEYTTGRQTFGQPIASRQLVQDKLVRMVTDHTAGLLLAVQLGAL 307

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  +        A     + K    ++A      A E +GG+G   E  + RH      
Sbjct: 308 KDAGR-------MAPTQVSLAKRNNVRVALTGARLARELLGGNGITTEYPVIRHMLNLET 360

Query: 440 NSILLGSGNAMVLDVLN 456
                G+ +   L V  
Sbjct: 361 VDTYEGTHDIHTLIVGR 377


>gi|311103482|ref|YP_003976335.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758171|gb|ADP13620.1| acyl-CoA dehydrogenase, N-terminal domain protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 388

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 133/357 (37%), Gaps = 39/357 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-----HLMSPSVTSASMVALMTT 167
           +GL    +     P               ++ +          +++ +     +V    T
Sbjct: 43  EGLAPFGYIGGLLPEDDGGFGLDFVTWAMMVEEAGYCWGSLRTILNITNIFLRLVNAYGT 102

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P   + +               P+  ++  + + ++E   G+++A I  + +   D    
Sbjct: 103 PAQKEKFL-------------RPVLASAKNVCVAISEPNHGSNVAGIELKAEDQGDHYVL 149

Query: 228 LSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                W  +   +D  I+LA+      +G++  FLV R             RL +K+  +
Sbjct: 150 NGSKLWITNGVNADYAIVLARTFSASCDGKLSLFLVEREQSPYE------ARLVDKMVLK 203

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T EL F         LLG    +   +        L+ A+ +V   + +L  +I YA
Sbjct: 204 ASGTAELRFDGVRVPKENLLGAEGTALKTMLTGLNYGRLNIAMGAVGAAQAALDLSIEYA 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + +  ++++ I D+ +   AA AL ++ A +  +          AR+   I
Sbjct: 264 KTRRQFGRPIGEFQLVQKHIVDMMVRTEAARALGYKAAVAVQKGLP-------ARVECSI 316

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            K +  + A  V   A+   GG GY  E  + R +R++   +I  G+     L V  
Sbjct: 317 AKLYGAEAAHEVAKIALSVHGGLGYSTEYPLERIFRDTSGGTIPEGTAEVQTLIVGR 373


>gi|292655527|ref|YP_003535424.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291370788|gb|ADE03015.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 383

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 118/357 (33%), Gaps = 24/357 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L+  +  GL        +          +  +  +  A       +  +     ++ 
Sbjct: 43  REVLQAGMDAGLVAQDISEEYGGKGFDLQQMLAISEEFYRADAGIALTLQLASFGCEIME 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W               P+ +     GL ++E + G+D+A + +  +K  D
Sbjct: 103 HYGSEEQKEKWL-------------RPVAENEQLSGLAVSEPQTGSDMAGMETAAEKTDD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G        W  ++  +D   + A+  +           +     +G   + +  K+G R
Sbjct: 150 GYVLNGEKYWVGNAVEADWLTVYAKTADTDDRYSNYSMFIVPTDTSGYEAEHIPEKMGMR 209

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++    + F +       L+G        + D      +     S+     ++ E   + 
Sbjct: 210 ASKQGHIVFDDCEVPEENLIGTEGGGFYMLADFFNHGRVIVGGHSLGLAAAAIEETWEFV 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +   ++  +AD+ ++  AA AL++R A      +        A   A  
Sbjct: 270 HDRQAFGRSVSEFQAVQHILADMRMEFEAARALNWRAAEKVANGED-------AGFWAAA 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           TK    + A  V    M+  GG   + E  I+R YR++    I  G+       +  
Sbjct: 323 TKTKSTETAVDVAERGMQLHGGRSVLNEYKISRVYRDARIPVIYEGANEIQRNLIYR 379


>gi|229490551|ref|ZP_04384389.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
 gi|229322371|gb|EEN88154.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus
           erythropolis SK121]
          Length = 382

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 133/383 (34%), Gaps = 36/383 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L  +   GE        P    L R++   GL  +    S           I      
Sbjct: 26  PHLTQWERDGE-------IP--RELHRKAGALGLLGASAPESAGGEGGDAVDSIVICEEM 76

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A    G   S      ++  L+        + W               P  +      
Sbjct: 77  HQAGASGGLFASLFTCGIAVPHLIAAGDEAQIEKWVK-------------PTLRGDKIGS 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE  GG+D+  +T+  ++  D  Y ++G K F++S +   F++ A   G  G   V 
Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGDH-YVVNGAKTFITSGVRADFVVAAVRTGGPGAGGVS 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ +    G    R   K+G R++ T EL F +       L+G  N     +    +  
Sbjct: 183 LLVIEKGTPGFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVSE 242

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  + +     L   + + R R   G  LI +  ++  + ++A  I  A   +  +
Sbjct: 243 RVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHSV 302

Query: 377 ANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +         E  +A+  A  T  W       V  +A++  GG GY++E  + R YR
Sbjct: 303 IERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQYR 355

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           +     I  G+   +       L
Sbjct: 356 DMRILGIGGGTTEILTGLAAKRL 378


>gi|89056313|ref|YP_511764.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865862|gb|ABD56739.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 386

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 104/288 (36%), Gaps = 16/288 (5%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
            E       P  +      L +TE   G+D+  +     +   G + ++G K F+S    
Sbjct: 103 GEQVEKYLLPAVRGERMDALAMTEPDAGSDVRGMKCNAVRDG-GDWVVNGSKHFISGAEH 161

Query: 240 SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D FI+          +     +   L D    G   +   N + +R      LEF++  
Sbjct: 162 ADFFIVFVATGVDETPKGPKKRITCFLVDRGHGGFEVRDGYNSVSHRGYKNRILEFNDCR 221

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
              G +LG+++     + +      L  A  SV   R     A+ YA +R   G  +   
Sbjct: 222 LPDGQVLGEVDGGFAVMNEWLYATRLTVAAFSVGRARRCFDMAVDYAAQRKQFGQAIAKF 281

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   IAD+  +I AA  L+   A   D+          A       K +  +M   V 
Sbjct: 282 QGVSFQIADMITEIDAADHLTLAGAWRLDKGLP-------ANREIASAKLYATEMLARVT 334

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 335 DTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDLFR 382


>gi|209886037|ref|YP_002289894.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5]
 gi|209874233|gb|ACI94029.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5]
          Length = 401

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 129/364 (35%), Gaps = 37/364 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             + R     GL        +        A+ + A  +  +           S      +
Sbjct: 59  RDIFREMGELGLIGLTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 118

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D+  + ++ +K+S
Sbjct: 119 YSYGDEAQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDVDGMKTRAEKVS 165

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+ +       V   + +    GL   ++  K+  R
Sbjct: 166 DGYRLTGSKMWISNAPIADVFVVWAKSQAHDNK--VRGFILEKGMKGLSAPKIAGKLSLR 223

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 224 ASITGEVVMDGVVVPESALLPNVSGLAGP------FGCLNRARYGISWGAMGAAEDCFHR 277

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +IA     S R+    DE K   E      
Sbjct: 278 ARQYVLDRKQFGRPLAATQLVQKKLADMEAEIALGLQGSLRIGRLMDEGKVTPE------ 331

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  +   A +  GG+G   E  + RH +   + +   G+ +   L +
Sbjct: 332 -MVSIMKRNNCGKALDIARVARDMHGGNGISSEFHVMRHAQNLESVNTYEGTHDVHALIL 390

Query: 455 LNLL 458
              +
Sbjct: 391 GRAI 394


>gi|148553745|ref|YP_001261327.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498935|gb|ABQ67189.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 394

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 126/361 (34%), Gaps = 33/361 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + R     GL        F        A+ + A  +  +       +   S      + 
Sbjct: 54  DIFREMGAQGLLGVTVPDEFGGAGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                 GLTE   G+D   + ++  K   
Sbjct: 114 AYGSEEQKRRYLPKLASGEW-------------IGCFGLTEPDAGSDPGGMRTRAVKTEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ +   G   +   + +    GL   +++ K+  R+
Sbjct: 161 GYRLSGNKTWISNAPIADVFVVWAKSDAHDGQ--IRGFVLEKGAKGLSAPKIEGKLSLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T  +   +         +     V+ +K     L+ A   +S   +  AE   +A R 
Sbjct: 219 SITGMINLDDVEV----GEDALLPNVQGLKGPFGCLNRARYGISWGALGAAEFCFHAARQ 274

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    + ++ +AD+  DI+     S R+    DE +       +A  M 
Sbjct: 275 YGLDRKQFGRPLAATQLYQKKLADMLTDISLGLQASLRVGRLMDEGR-------FAPEMV 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K      A  +  +A +  GG+G  EE  + RH       +   G+ +   L +   
Sbjct: 328 SIVKRNNVGKALDIARQARDMHGGNGISEEYQVIRHMMNLETVNTYEGAHDVHALILGRA 387

Query: 458 L 458
           +
Sbjct: 388 I 388


>gi|126432845|ref|YP_001068536.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126232645|gb|ABN96045.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 611

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/540 (19%), Positives = 204/540 (37%), Gaps = 78/540 (14%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMA-----------NYNTPQLHAYGPGG 91
           L  ++    ++   +   L          E+AR+A           + N P    + P  
Sbjct: 15  LFEVLGVDKAMGQGDFSELDADTAREMLDEMARLAEGPIAESFFEGDRNPPV---FDPKT 71

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                V+    +   +R     G   +        +   +A +  A   +++    A ++
Sbjct: 72  H---SVKLPEPFKKSMRALFDAGWDKAGMPEELGGMPMPRALQ-WALIEHVLGANPAAYM 127

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     A ++  + T    K WA     R +  T             + LTE   G+D+
Sbjct: 128 YAMGGGMAHILHNLGTEEQKK-WAVLAAERGWGAT-------------MVLTEPDAGSDV 173

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCFLVP 259
            A  ++  K  DG + + G K F++S  SD        ++LA+ EG       +  F VP
Sbjct: 174 GAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVP 233

Query: 260 RLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
           + L D      G  NG     +++K+G + +AT EL          G+L+G+++     +
Sbjct: 234 KFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLVGEVHNGIAQM 293

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
            D+     +     +++ +      A+ YA+ R                  +   P ++R
Sbjct: 294 FDVIEQARMMVGTKAIATLSTGYLNALEYAKSRVQGADMTQMTDKTAPRVTITHHPDVRR 353

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARI----MAPITKYWCCKMAPA 410
           ++           AL    A   D A +++    ++  A      M PI K    + A A
Sbjct: 354 SLMTQKSYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPIVKGVGSEQAYA 413

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468
            + E+++  GGSG++++  I ++ R++  +S+  G+      D     ++         +
Sbjct: 414 KLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGQALAYV 473

Query: 469 FSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEK-IALASSAAALYRAGMNDI 525
              +EQ + S SG   +   R  ++   ED + +A  LT   +A   + A LY+ G+  +
Sbjct: 474 AGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENPAELYKVGLGSV 533


>gi|325183020|emb|CCA17474.1| isovalerylCoA dehydrogenase putative [Albugo laibachii Nc14]
          Length = 422

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 139/369 (37%), Gaps = 32/369 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVA 163
            + R     GL        +          + A   +  +        ++ S+   + +A
Sbjct: 68  KMFRELGALGLLGITAPEKYGGSNMDSLAAVIAHEEFSSSDPAFCLSYLAHSMLFVNNLA 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + + P+                     G+G++E   GTD+  + +  +    
Sbjct: 128 QNGNEIQCRKYLPQ-------------ACAGKKICGMGMSEPSVGTDVLGMNTSARLSRC 174

Query: 224 G-IYCLSGHKWFLSSP------MSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQ-R 274
           G  Y L+G K ++++       + D F++ A+  G       +   + +    G     R
Sbjct: 175 GMYYLLNGSKMWITNGALNDTELGDYFLVYARTGGSSTSKKNISCFIVEKGFQGFSLGQR 234

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVS 331
           +KNK G R++ T EL F +    +   +       +  M+ L    +  A MS+   R S
Sbjct: 235 IKNKCGMRASNTAELVFEDCKIPIENLIGKEGDAVLCMMRNLKIERVTLAAMSLGIARRS 294

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L     YA+ R   G  L     ++++I++   +  A  +  ++ A +       + ++A
Sbjct: 295 LQIMNDYAKERQAFGQSLNTFGQIQKSISESYAEFMAGRSYVYQAARNL------ALDSA 348

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              +     K +C  MA  +   A++ +GG+GYI +  + R +R++    I  G+  +  
Sbjct: 349 DFDVDCDGVKLYCGVMAKRIADRAIQTLGGNGYIGDYVVERLWRDAKLLEIGGGTNESHH 408

Query: 452 LDVLNLLEK 460
            ++   L K
Sbjct: 409 KNMTRQLAK 417


>gi|326383652|ref|ZP_08205338.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197736|gb|EGD54924.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 373

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 118/357 (33%), Gaps = 27/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +      G    +    +  V    A   R         +     +        ++  
Sbjct: 29  EFIEEMKELGFFGLLAPAEYGGVDVSMACFARVCEELARGWMSLAGAIGGHSVITYLIKT 88

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     ++ P              M +  +   + LTE  GG+D+ A+ +    +  G
Sbjct: 89  FGTQEQKDEYLP-------------AMAEGRIRATMALTEPSGGSDLQAMRTHADPVEGG 135

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S  F +L   +         +  +L +   +G    +   K+G R
Sbjct: 136 FAIKGSKTWISNAAHSGLFGLLCVTDRAADPAHKGMSVILVEPG-DGFTVSKKLPKLGYR 194

Query: 283 SNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                EL F +        L G+ N   G +     +  +  A  ++   + SL  A  Y
Sbjct: 195 GVEACELVFDDMGVPADAVLGGEPNKGWGHMMRGLEVGRIQVAARALGVGQASLEAATRY 254

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           ++ R   G  +     +   IAD+A    AA  L+   A   D  +    EA  A     
Sbjct: 255 SQERESFGRPIWKHQSVGNLIADMATKQQAARLLTVDAAQKLDRGERADLEAGMA----- 309

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             K +  + A  +  +++   GG GY +E  + R++R++P   +  G+       + 
Sbjct: 310 --KLFASETAMQLALDSIRVHGGYGYSKEYDVERYFRDAPLMIVGEGTNEIQRNVIA 364


>gi|332266384|ref|XP_003282188.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 1 [Nomascus leucogenys]
          Length = 700

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 154/413 (37%), Gaps = 54/413 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 235 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTESSSGSDAASIRTSAVPS 281

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 282 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 341

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 342 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 398

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 399 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 456

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP-ANSILLGSG 447
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+   +  +     
Sbjct: 457 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDPRNSGPLRGQMT 512

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL----------- 493
           ++ V+ +   ++KG  L   L S L+   G++G    +    LR    L           
Sbjct: 513 SSAVVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIVH 571

Query: 494 --CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                   LA    E+ A    A  L +     + + FL  R  D     + M
Sbjct: 572 PELNRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAM 623


>gi|319787343|ref|YP_004146818.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465855|gb|ADV27587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 387

 Score =  222 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 77/420 (18%), Positives = 138/420 (32%), Gaps = 39/420 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
            P+    ++  +         + +AR       P +      G+ +D+  F      L+ 
Sbjct: 3   LPAYDLYDVRSMLSDEERAVQEAVARFTDERVLPII------GDCFDQGRFP---KELVP 53

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                GL  S     +        ++ +    L          +   S      +    +
Sbjct: 54  EIASLGLLGSSLPEEYGCAGLNAVSYGLICQELERGDSGLRSFVSVQSSLCMYPIYAYGS 113

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + W P++ + E             V    GLTE  GG+D A + +  +K       
Sbjct: 114 EEQRRQWLPRMAAGE-------------VIGCFGLTEPHGGSDPANMKTHAKKDGGDWVI 160

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +  ++D  I+ AQ +  +  F+V     +    G   Q +K+K+  R++ T 
Sbjct: 161 NGSKMWITNGNLADIAIVWAQTDEGIQGFIV-----EKGTPGFTAQEIKHKMSLRASVTS 215

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            L F N        L    G    +  L           V      L EA++Y++ R + 
Sbjct: 216 SLFFDNVRVPDSARLPNVKGLKGPLGCLTQARYGITWGPVGAAIACLDEALNYSKERILF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +      +  +AD+A  I  A  L  +L    D                 + K+  C
Sbjct: 276 GRPVAATQSAQIKLADMARRITLAQLLVLQLGRLKDAG-------TMQPQQVSLAKWNNC 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +MA  +  E  + +GG+G   E +  RH     +     G+     L +   L  G N F
Sbjct: 329 RMAIDIARECRDLLGGAGITTEHAAIRHALNLESVITYEGTETVHQLVIGRELT-GINAF 387


>gi|118619775|ref|YP_908107.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99]
 gi|118571885|gb|ABL06636.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99]
          Length = 382

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 10/272 (3%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P    +    L +TE  GG+D+  + +   +  D    ++G K +++S +   F++ A  
Sbjct: 114 PTLAGNKIGALAITEPGGGSDVGHLRTSAVREGDHF-IVNGAKTYITSGVRADFVVTAVR 172

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 173 TGGPGAGGVSLLVVEKGTPGFVVSRKLDKMGWRSSDTAELSYTDARIPAANLVGAENSGF 232

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++A  I
Sbjct: 233 AQIAQAFVSERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRI 292

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A   S  +       +                K    +    V  +A++  GG GY+ 
Sbjct: 293 DVARVYSRSVVERQLAGEHD------LIPQVCFAKNTAVEAGEWVANQAVQLFGGMGYMA 346

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  I R YR+     I  G+   +      LL
Sbjct: 347 ESEIERQYRDMRILGIGGGTTEILTALAAKLL 378


>gi|145225136|ref|YP_001135814.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217622|gb|ABP47026.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 393

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 138/399 (34%), Gaps = 31/399 (7%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +        +A     +  A  P  E W+     P    +   +   GL        +  
Sbjct: 7   TDDHLAFGELARDFAAKAVA--PHYEAWEDAGIIP--RDVFTEAGALGLLGFAAPEQYGG 62

Query: 127 VV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREY 183
           V      +       ++ A      L         +  L   TTP   K W P   S   
Sbjct: 63  VGTADFRYNQILVERFMDAGCGGVGLSFAVHNDICLPYLADLTTPEQKKRWLPGFVSG-- 120

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       +   +G+TE   G+D++ I +      D    ++G K F+++  +   
Sbjct: 121 -----------RLIAAIGMTEPGAGSDLSGIRTSAVDKGDHF-LVNGAKTFITNGQNADL 168

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A          +  L+ +   +G    R  +K+G     T EL F++        L 
Sbjct: 169 VITAVRTSPDRHRGLTLLVMERGLDGFERGRNLDKLGLHCQDTSELTFTDVKVPKENVLG 228

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            V  G    M+ L    +  A+ S+  +R +L   + Y R R   G  +      + ++A
Sbjct: 229 EVGDGFAHMMRNLAQERMQIAVGSLGRIRAALDWTVTYVRERTAFGKPIGALQNTRFSLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A  +A   A         +E +  + +AA A++ A  T++ C       +    +  G
Sbjct: 289 DVATQLAVTQAFIDNCVIELNEGRLTAADAAMAKLWASETEFRC-------LDACQQLFG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           G GY+ E  IAR   ++    +  G+   M   +   L 
Sbjct: 342 GYGYMREYPIARAAIDARITRVYGGTSEIMREIIGRDLR 380


>gi|149201503|ref|ZP_01878477.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149144551|gb|EDM32580.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 386

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 103/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E       P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CTGEQIERYLLPAVRGERMDALAMTEPGAGSDVRGMKCAARRDG-GDWVLNGTKHFISGA 159

Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G           +   L D    G   +     + +R    + LEF +
Sbjct: 160 DHADFVIVFVATGEDQTDKGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMVLEFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A M+V   R     A+ YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFAVMNEWLYATRITVATMAVGRARRCFDHALRYAAEREQFGQAIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQLADMITEIDAADLLTLNAAWRLDQGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   + +
Sbjct: 333 VTDATLQIHGGMGLMDDLPIERFWRDARVERIWDGTSEIQRHIISREMLR 382


>gi|146339175|ref|YP_001204223.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191981|emb|CAL75986.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 404

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 126/371 (33%), Gaps = 37/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL        +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D A + ++ +K++
Sbjct: 122 YAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDPAGMKTRAEKVA 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 227 ASITGEIVMDGVVVPEDALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCMHR 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +IA     S R+    DE K        A 
Sbjct: 281 ARQYTLDRKQFGRPLAATQLVQKKLADMETEIALGLQASLRVGRLMDEGK-------MAP 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  +   + +  GG+G   E  + RH       +   G+ +   L +
Sbjct: 334 EMISIVKRNNCGKALDIARVSRDMHGGNGIQIEYQVMRHVSNLETVNTYEGTHDVHALIL 393

Query: 455 LNLLEKGTNLF 465
              +      F
Sbjct: 394 GRAITGIQAFF 404


>gi|145222474|ref|YP_001133152.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145214960|gb|ABP44364.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 382

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 12/277 (4%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T   P  +      L +TE  GG+D+  +T++  +  D  + ++G K +++S +   +++
Sbjct: 110 TYVRPTLRGENIGSLAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVV 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A   G  G   +  ++ D    G    R  +K+G RS+ T EL +++       ++G  
Sbjct: 169 TAARTGGPGAAGISLIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYTDVRVPAANVVGAE 228

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +    +   +  A  + S  +  L   + + R R   G  LI +  ++  +A++
Sbjct: 229 NTGFLQIAAAFVSERVGLAAQAYSSAQRCLDLTVEWCRNRQTFGKPLIARQTVQSTLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  I  A   +  +        +    E  +A+  A     W       V  +A++  GG
Sbjct: 289 ARRIDVARVYTRHVVERQLAGDADLITEVCFAKNTAVEAGEW-------VANQAVQLFGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ E  + R YR+     I  G+   +       L
Sbjct: 342 MGYMTESEVERQYRDMRILGIGGGTTEILTSLAAKTL 378


>gi|119775928|ref|YP_928668.1| acyl-CoA dehydrogenase-like protein [Shewanella amazonensis SB2B]
 gi|119768428|gb|ABM00999.1| acyl-CoA dehydrogenase-like protein [Shewanella amazonensis SB2B]
          Length = 391

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 125/361 (34%), Gaps = 36/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +        ++ + A  +  +       +   S      +
Sbjct: 52  REIMNELGELGLLGATLPEEYGCANANYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ + E+                 GLTE   G+D A + ++ ++I 
Sbjct: 112 YTYGTEAQRRKYLPKLATGEW-------------VGCFGLTEPDVGSDPAGMKTRAERID 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+++G +  F++     +    GL   +++ K   R
Sbjct: 159 GGYRITGAKMWITNSPIADVFVVWAKLDGAIRGFVL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ T E+   N         +     VE +K     L+ A   ++   +  AE   +A R
Sbjct: 214 ASITGEIVMDNVEV----GEDALLPNVEGLKGPFGCLNKARYGIAWGALGAAEFCWHAAR 269

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R      L    + ++ +AD+  +I        +     D         A     
Sbjct: 270 QYGLDRIQFNRPLAANQLYQKKLADMQTEITTGLFACLQAGRLMDV-------DALPVEA 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L +  
Sbjct: 323 ISLIKRNSCGKALDIARIARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHDIHALILGR 382

Query: 457 L 457
            
Sbjct: 383 A 383


>gi|332266386|ref|XP_003282189.1| PREDICTED: very long-chain specific acyl-CoA dehydrogenase,
           mitochondrial isoform 2 [Nomascus leucogenys]
          Length = 678

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 154/413 (37%), Gaps = 54/413 (13%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L  T    + + PK+ S E                   LTE   G+D A+I +     
Sbjct: 213 ILLFGTKAQKEKYLPKLASGE-------------TVAAFCLTESSSGSDAASIRTSAVPS 259

Query: 222 SDGIY--CLSGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQR 274
             G Y        W  +  ++D F + A+    +   G     +   + +    G+ +  
Sbjct: 260 PCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGP 319

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-- 331
            + K+G +++ T E+ F           NV        K+ ++ L++    ++       
Sbjct: 320 PEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 376

Query: 332 ---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+  +   
Sbjct: 377 RGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTD-- 434

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP-ANSILLGSG 447
                +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+   +  +     
Sbjct: 435 ----FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDPRNSGPLRGQMT 490

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL----------- 493
           ++ V+ +   ++KG  L   L S L+   G++G    +    LR    L           
Sbjct: 491 SSAVVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGIVH 549

Query: 494 --CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
                   LA    E+ A    A  L +     + + FL  R  D     + M
Sbjct: 550 PELNRSGELAVQALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAM 601


>gi|316932637|ref|YP_004107619.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600351|gb|ADU42886.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 404

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/351 (17%), Positives = 120/351 (34%), Gaps = 31/351 (8%)

Query: 114 GLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +        A+ + A  +  +           S      +         K
Sbjct: 72  GLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAYGDENQRK 131

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                 GLTE   G+D   + ++ +K++DG        
Sbjct: 132 KYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTKAEKVADGYRLTGSKM 178

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++P++D F++ A+         +   + +    GL   ++  K+  R++ T E+   
Sbjct: 179 WISNAPIADVFVVWAKS--AAHDNQIRGFVLEKGMKGLSAPKVGGKLSLRASITGEIVMD 236

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
                ++ + N+             L+ A   +S   +  AE     A  Y   R     
Sbjct: 237 GV---VVPEENLLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCFHRARQYTLDRKQFNR 293

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +I      S R+    DE K        A  M  I K   C  
Sbjct: 294 PLAATQLVQKKLADMETEITLGLQASLRVGRLMDEGK-------MAPEMISIVKRNNCGK 346

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  +   A +  GG+G   E  + RH +     +   G+ +   L +   +
Sbjct: 347 ALDIARMARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRAI 397


>gi|284990870|ref|YP_003409424.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284064115|gb|ADB75053.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 379

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 116/345 (33%), Gaps = 25/345 (7%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
            +        +     ++    +          +S    S   +A   TP   + W P +
Sbjct: 57  PYPEELGGGGQPYEVYLQVLEEFGARWAAVAVAVSVHGLSCHPLATFGTPAQQERWLPAM 116

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E             +  G  L+E + G+D AA+  + + +  G        W     
Sbjct: 117 LAGE-------------LVGGYSLSEPQAGSDAAALACRAEAVEGGYRVTGTKSWITHGG 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295
            +D + + A+     G   +   L  G   GL + R + K+G  +  T    +       
Sbjct: 164 RADFYALFART--GEGSRGISCFLAPGRVEGLSFGRPEEKMGLHAIPTTMANWDGARIEA 221

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G                 L  A ++    + +L  A+ YA  R   G  +ID   +
Sbjct: 222 DRLIGAEGQGLSIAFSALDSGRLGIAAVATGLAQAALEAAVDYAHERSTFGRRIIDHQGL 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +AD+A  +  A A     A   D  +    +       A + K      A  V  +A
Sbjct: 282 GFLLADMAAAVDTARASYLDAARRRDAGRPYGRQ-------ASVAKLVATDAAMRVTTDA 334

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++ +GG GY  +  + R+ RE+    I  G+     L +   L +
Sbjct: 335 VQVLGGYGYTRDFPVERYMREAKVMQIFEGTNQIQRLVISRSLAR 379


>gi|118592232|ref|ZP_01549625.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118435204|gb|EAV41852.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 386

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CKGDQIERYLMPAVRGEKMDALAMTEPDAGSDVRGMKCTAVRDG-GDWVVNGSKHFISGA 159

Query: 239 MSDAFIML-----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++          R     +   L D    G    +  N + +R      L F+N
Sbjct: 160 DHADFVIVFIATGVDETPRGPKKRITCFLVDRGTPGFEIAKGYNSVSHRGYKNSILYFNN 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A  SV   R     A++YA  R   G  + 
Sbjct: 220 CRLSDAQVLGEVDGGFDVMNEWLYATRITVATNSVGRARRVFEHALNYAAERQQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADLLTLSAAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V   A++  GG G ++E  I R +R++    I  G+       +   L +
Sbjct: 333 VTDAALQIHGGMGLMDELPIERFWRDARVERIWDGTSEIQRHIISRELFR 382


>gi|93005645|ref|YP_580082.1| glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
 gi|92393323|gb|ABE74598.1| Glutaryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5]
          Length = 394

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 132/370 (35%), Gaps = 39/370 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R+    GL     D      +   A+ + A  +  +       +   S      + 
Sbjct: 55  RDIMRQMGEMGLLGVTIDGYGCAGMSSVAYGLIAKEVEAVDSGYRSAMSVQSSLVMHPIH 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                 GLTE   G+D ++++++ + ++ 
Sbjct: 115 AYGTEEQKEKYLPKLATGEY-------------VGCFGLTEPDSGSDPSSMSTRARAVAG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP+SD F++ A+ +    C      + D    GL   +++ K   R+
Sbjct: 162 GYELTGNKMWITNSPISDVFVVWAKDDAGDICG----FILDKGMKGLSAPKIEGKFSLRA 217

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
           + T E+     F        D+    GP         L+ A   ++   +  AE      
Sbjct: 218 SVTGEIVMDKVFVPEANAFPDIRGLKGP------FGCLNKARYGIAWGSMGAAEFCWKAA 271

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    +++  +A++  +I      + R+    DE  +       A  
Sbjct: 272 RQYTLDRKQFGRPLAATQLVQLKLANMQTEITLGLQAALRVGRLMDEDNA-------APE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +   A +  GG+G  +E  I RH     A +   G+ +   L +L
Sbjct: 325 MISLIKRNNCGKALEIARIARDMHGGNGISDEFHIIRHVMNLEAVNTYEGTHDIHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|332663815|ref|YP_004446603.1| glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332629|gb|AEE49730.1| Glutaryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 407

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/446 (17%), Positives = 159/446 (35%), Gaps = 69/446 (15%)

Query: 31  FIGMNAYSSDSLLVA--LIANFP--SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           F G + Y+ D LL    L+A     + V +E+  +         +E +  A   T     
Sbjct: 21  FQGHDYYNIDDLLSEDHLLAREAVRTWVKQEVTPI--------IEEYSDRAQCPTHLFKG 72

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
               G       F P+   L       G+    +    + + R        + +  MA +
Sbjct: 73  LAEIGA------FGPS---LPEEYGGGGMDEIAYGIIMQELERGD------SGIRSMASV 117

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +   +M P       +    +    + + PK+ + ++                 GLTE  
Sbjct: 118 QGSLVMYP-------IYRFGSEEQRRKYLPKLGNGDF-------------IGCFGLTEPD 157

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G++   + +  +   D         W  +SP++D  ++ A+ E      +V  ++ +  
Sbjct: 158 HGSNPNGMVTNIKDDGDAYILNGAKMWITNSPLADVAVVWAKDE----SGIVRGVIVERG 213

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325
             G     +  K+  R++ T EL F +               V+ MK  L  L  A   +
Sbjct: 214 MPGFSAPEIHGKLSLRASITGELVFEDVRVPKSN----LLPNVQGMKGPLSCLSKARYGI 269

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   +  A      A+ YA+ R+  G  +    + ++ +A++  +I  A  L++RL    
Sbjct: 270 AWGAIGAAMDCYDSALRYAKERNQFGRPIAQFQLTQKKLAEMITEITKAQLLAWRLGTLA 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ K+   + + A+            MA  +  EA +  GG G   E  + RH       
Sbjct: 330 NQGKATPGQISMAKR-------NNVNMALEIAREARQIHGGMGITNEYPVMRHMMNLETV 382

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE 466
               G+ +  +L +  +   G N F+
Sbjct: 383 LTYEGTHDIHLL-ITGMDVTGLNAFQ 407


>gi|163745795|ref|ZP_02153154.1| glutaryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161380540|gb|EDQ04950.1| glutaryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 407

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 126/365 (34%), Gaps = 34/365 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +  +          AR           +MS  +      +    
Sbjct: 69  REMGDMGLLGVTIPEEYGGLGGNYVSYGLVAREVERVDSGYRSMMSVQASLVMYPIYAYG 128

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K + PK+ S E+                 GLTE   G+D A + ++  K ++G  
Sbjct: 129 SEEQRKKYLPKLCSGEW-------------IGCFGLTEPDAGSDPAGMKTRAVKTANGYK 175

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+ E       +   + +    GL   ++ NK+  R++ T
Sbjct: 176 LTGSKMWISNSPIADVFVVWAKSEEHDNK--IRGFVLEKGMKGLSAPKIGNKLSLRASIT 233

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
            E+             +     V+ +K     L+ A   +S   +  AE   +A R    
Sbjct: 234 GEIVMDGVEV----GEDALLPNVQGLKGPFGCLNRARYGISWGAMGAAEFCWHASRQYGL 289

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    + ++ +AD+  +I+     S ++    D A +       A  M  I 
Sbjct: 290 DRKQFNKPLAQTQLFQKKLADMMTEISLGLQGSLQVGRLMDAANA-------APEMISIV 342

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  V   + +  GG+G   E  + RH       +   G+ +   L +L   + 
Sbjct: 343 KRNNCGKALDVARMSRDMHGGNGISGEFQVIRHMMNLETVNTYEGTHDVHAL-ILGRAQT 401

Query: 461 GTNLF 465
           G   F
Sbjct: 402 GLQAF 406


>gi|126348455|emb|CAJ90178.1| putative acyl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
           23877]
          Length = 408

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 133/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDSTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 ATPGLSQGQKFKKHGIRASHTAEVVLDNVRVPGSCLLGGKEKLDARLARAREKARKGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALEYAQTREQFGRPIIDNQGIAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 SIDAARLLVWRASWMAINGKPFTAA------EGSMSKLFASETAKKVTAQAVQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R+S   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 402


>gi|108797222|ref|YP_637419.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866307|ref|YP_936259.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108767641|gb|ABG06363.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692396|gb|ABL89469.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 611

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/540 (19%), Positives = 204/540 (37%), Gaps = 78/540 (14%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMA-----------NYNTPQLHAYGPGG 91
           L  ++    ++   +   L          E+AR+A           + N P    + P  
Sbjct: 15  LFEVLGVDKAMGQGDFSELDADTAREMLDEMARLAEGPIAESFFEGDRNPPV---FDPKT 71

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                V+    +   +R     G   +        +   +A +  A   +++    A ++
Sbjct: 72  H---SVKLPEPFKKSMRALFDAGWDKAGMPEELGGMPMPRALQ-WALIEHVLGANPAAYM 127

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     A ++  + T    K WA     R +  T             + LTE   G+D+
Sbjct: 128 YAMGGGMAHILHNLGTEEQKK-WAVLAAERGWGAT-------------MVLTEPDAGSDV 173

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCFLVP 259
            A  ++  K  DG + + G K F++S  SD        ++LA+ EG       +  F VP
Sbjct: 174 GAGRTKAVKQDDGSWHIEGVKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVP 233

Query: 260 RLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
           + L D      G  NG     +++K+G + +AT EL          G+L+G+++     +
Sbjct: 234 KFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLVGEVHNGIAQM 293

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
            D+     +     +++ +      A+ YA+ R                  +   P ++R
Sbjct: 294 FDVIEQARMMVGTKAIATLSTGYLNALEYAKSRVQGADMTQMTDKTAPRVTITHHPDVRR 353

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYARI----MAPITKYWCCKMAPA 410
           ++           AL    A   D A +++    ++  A      M PI K    + A A
Sbjct: 354 SLMTQKAYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPIVKGVGSEQAYA 413

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468
            + E+++  GGSG++++  I ++ R++  +S+  G+      D     ++         +
Sbjct: 414 KLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGQALAYV 473

Query: 469 FSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEK-IALASSAAALYRAGMNDI 525
              +EQ + S SG   +   R  ++   ED + +A  LT   +A   + A LY+ G+  +
Sbjct: 474 AGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENPAELYKVGLGSV 533


>gi|183980533|ref|YP_001848824.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M]
 gi|183173859|gb|ACC38969.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M]
          Length = 611

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/522 (18%), Positives = 195/522 (37%), Gaps = 72/522 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
               + L  +        A       + N P    + P       V    ++   +R  I
Sbjct: 36  DTAREMLTEISRLAEGPVAASFIE-GDRNPPV---FDPKTH---TVTLPESFKDSVRAVI 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G   +  D     +   +A  + A   +L+    A  + S     A ++  + T    
Sbjct: 89  EAGWDKAGLDEELGGMPMPRA-LMWALHEHLLGANPAVWMYSGGAGFAQIMYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 148 K-WAVMASERGWGST-------------MVLTEPDAGSDVGAGRTKAVEQADGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
           K F++S  SD        ++LA+ EG       +  F VP+ L D      G  NG+   
Sbjct: 194 KRFITSGDSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL          G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELSLGQHGVPAKGWLIGEVHEGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALEYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEA---KSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A    +   +A  A      + P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 374 TFQDAAVAEAAHGVDAKLAVKINDLLLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVI 484
            ++ R++  +S+  G+      D      + +KG  L     Q+   ++ + G+   K  
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQEFVDSETGNGRLKTE 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAA-ALYRAGMNDI 525
             L        + + +A  LT  +  A     +LY+ G+  +
Sbjct: 494 RAL--LAKALTDVQAMAATLTGYLMAAQQDINSLYKVGLGSV 533


>gi|313236421|emb|CBY11738.1| unnamed protein product [Oikopleura dioica]
          Length = 598

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/462 (16%), Positives = 162/462 (35%), Gaps = 58/462 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D++   P    +++     G          E +        R   +     L  G +M  
Sbjct: 81  DQICTVPD--EVMKGMSEMGAFGLQVPEELEGLGLNNTEYARLTEIVGQNDLGVGIVMGA 138

Query: 155 S-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   + +         + P + +                     LTE   G+D A+
Sbjct: 139 HQSIGFKAILICGNEEQKAKYLPDVATG-------------RKFAAFALTEPGSGSDAAS 185

Query: 214 ITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP 267
           I ++     DG   Y   G  W  +   +D F +  +V    E       +   + +   
Sbjct: 186 IQTRATPSEDGKTYYLNGGKVWISNGGFADIFTVYCKVPEVQEDGTTVDKMAAFIVERDF 245

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-- 324
            G+     + K+G + + T E+ F NT        N+  G  +  K+ +  L++      
Sbjct: 246 GGVTNGPPEKKMGIKCSNTAEVYFDNTPIPA---ENLIRGVGDGFKVAMEVLNNGRFGMS 302

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                 MR     A  +A  R      + +   ++  +A +A +  A  ++++ ++ + D
Sbjct: 303 SCLAGTMRQLTKRAAEFAYSRKQFNDKIYNYGAIQEKLARMAAEQYAVESVAYLISQAMD 362

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +A++   EAA       I K +  + A     E ++ +GG G++ E+ + +  R+    
Sbjct: 363 SKAENYHLEAA-------IGKIFGSEKAWQAADECIQTMGGMGFMYEQGVEKIMRDLRIF 415

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDL----------GSSGKKVITILRD 489
            I  G+ + + L + L  ++    L ++  S   + +          GS+G K+ ++   
Sbjct: 416 RIFEGTNDILRLMIALQSMQVQGKLLKEDKSMAVKAMIAGKTGFSVAGSAGGKLSSL--- 472

Query: 490 SISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIADVF 529
               C +    A+ + E I     +S   L +     ++  F
Sbjct: 473 ---ACSQLSSEAKAIEESINAFHVASTNLLVKHQKKIMSRQF 511


>gi|313221396|emb|CBY32149.1| unnamed protein product [Oikopleura dioica]
          Length = 598

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 77/462 (16%), Positives = 162/462 (35%), Gaps = 58/462 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D++   P    +++     G          E +        R   +     L  G +M  
Sbjct: 81  DQICTVPD--EVMKGMSEMGAFGLQVPEELEGLGLNNTEYARLTEIVGQNDLGVGIVMGA 138

Query: 155 S-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   + +         + P + +                     LTE   G+D A+
Sbjct: 139 HQSIGFKAILICGNEEQKAKYLPDVATG-------------RKFAAFALTEPGSGSDAAS 185

Query: 214 ITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP 267
           I ++     DG   Y   G  W  +   +D F +  +V    E       +   + +   
Sbjct: 186 IQTRATPSEDGKTYYLNGGKVWISNGGFADIFTVYCKVPEVQEDGTTVDKMAAFIVERDF 245

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-- 324
            G+     + K+G + + T E+ F NT        N+  G  +  K+ +  L++      
Sbjct: 246 GGVTNGPPEKKMGIKCSNTAEVYFDNTPIPA---ENLIRGVGDGFKVAMEVLNNGRFGMS 302

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                 MR     A  +A  R      + +   ++  +A +A +  A  ++++ ++ + D
Sbjct: 303 SCLAGTMRQLTKRAAEFAYSRKQFNDKIYNYGAIQEKLARMAAEQYAVESVAYLISQAMD 362

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +A++   EAA       I K +  + A     E ++ +GG G++ E+ + +  R+    
Sbjct: 363 SKAENYHLEAA-------IGKIFGSEKAWQAADECIQTMGGMGFMYEQGVEKIMRDLRIF 415

Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDL----------GSSGKKVITILRD 489
            I  G+ + + L + L  ++    L ++  S   + +          GS+G K+ ++   
Sbjct: 416 RIFEGTNDILRLMIALQSMQVQGKLLKEDKSMAVKAMIAGKTGFSVAGSAGGKLSSL--- 472

Query: 490 SISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIADVF 529
               C +    A+ + E I     SS   L +     ++  F
Sbjct: 473 ---ACSQLSSEAKAIEESINAFHVSSTNLLVKHQKKIMSRQF 511


>gi|114656359|ref|XP_001142955.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 4 [Pan
           troglodytes]
          Length = 386

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 109/347 (31%), Gaps = 26/347 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLM 143
               P  +  D            ++  + G+        +         H +    +   
Sbjct: 59  EHLAPKAQEIDHSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 118

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +        + S    + +         + + PK+ S EY                L ++
Sbjct: 119 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMS 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRL 261
           E   G+D+ ++  + +K  +         W  + P +D  I+ A+ +         +   
Sbjct: 166 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAF 225

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318
           + +    G    +  +K+G R + T EL F +       +LG  N     +     L  L
Sbjct: 226 IVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERL 285

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +  M+  L   I Y   R   G  +    +M+  +AD+   + A     + +A 
Sbjct: 286 VLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAK 345

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           + DE    +++             +  + A  V  + ++C    G  
Sbjct: 346 ACDEGHCTAKD-------CAGVILYSAECATQVALDGIQCFVSRGIS 385


>gi|145592702|ref|YP_001156999.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302039|gb|ABP52621.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 404

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 134/389 (34%), Gaps = 38/389 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD  E  P    +++ +   GL+   +  +        +  +    L+       
Sbjct: 29  PAAAEWDAREETP--WPIIQEAAKVGLYGFEFLATCWGDPSGLSLPVACEELF-WGDSGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  + + +    TP    +W P+ F     P                 +E   G
Sbjct: 86  GLSIFGTGLAVAAIYGTGTPEQLMEWVPQCFGDLDSP----------AVAAFCTSEPEAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+ A+ ++       D         +  +  ++   ++ A V+  +G       +    
Sbjct: 136 SDVGAMRTRAVYDEAADEWVLSGQKSYATNGGIAGVHVVTASVDPELGSRGQAAFVVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL   R   K+G R++ T ++   +                                 
Sbjct: 196 TPGLAATRKLRKLGLRASHTADVFLDDVRVPGRCLLGGKDALDERLARARSGKRAASQAA 255

Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M+            ++   R +   A+ YA+ R   G  +I+   +  A+AD+ ++I AA
Sbjct: 256 MRTFELSRPTVGAQALGVARAAYEYALDYAKERVQFGRPIIENQAVAFALADMKMEIDAA 315

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R +      +      A+      ++K    ++A +   +A++ +GG+G++ +  
Sbjct: 316 RLLVWRASWMGRNNR------AFTAGEGSMSKLKASEVAVSATEKAVQLLGGAGFLRDHP 369

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R YR++   +I  G+     L V   +
Sbjct: 370 VERWYRDAKIYTIFEGTSEIQRLVVARAI 398


>gi|194363937|ref|YP_002026547.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346741|gb|ACF49864.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 397

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 132/378 (34%), Gaps = 32/378 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +D+  F      L+      GL  +     +        ++ +    L         
Sbjct: 49  GDAFDQARFP---SELVPEIASLGLLGATLPGEYGGGDLGAVSYGLICQELERGDSGLRS 105

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P              M +  +    GLTE  GG+
Sbjct: 106 FVSVQSSLCMYPIYAYGSEEQRRQWLP-------------AMARGELIGCFGLTEAHGGS 152

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D A++ ++  +  D         W  S P++D  I+ AQ E  +  F++     +    G
Sbjct: 153 DPASMKTRAVRDGDDWRINGSKMWITSGPVADLAIVWAQTEDGIQGFVL-----EKGMPG 207

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              Q +K+K+  R++ T  L F +        L    G    +  L       +   +  
Sbjct: 208 FTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLTQARFGISWGPIGS 267

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA+ R + G  L      +  +A++A  I  A  L+ +L    +  + + 
Sbjct: 268 AIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITMAQLLALQLGRLKEAGQLQP 327

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ + A+          C+MA  +  E  + +GG+G   E    RH     +     G+ 
Sbjct: 328 QQVSLAKW-------NNCRMAIDIARECRDLLGGAGITTEHVAIRHALNLESVITYEGTE 380

Query: 448 NAMVLDVLNLLEKGTNLF 465
               L +   L  G N F
Sbjct: 381 TVHQLVIGRELT-GINAF 397


>gi|73537985|ref|YP_298352.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72121322|gb|AAZ63508.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 410

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 77/425 (18%), Positives = 141/425 (33%), Gaps = 38/425 (8%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW---DKVEFHPAWHALLR----R 109
           E    G+ ++    +E+A + N +   L     GGER    +   + P   AL R    R
Sbjct: 8   EWVEFGDALIKFVDREVAGLENEHRALL-----GGERTVYTEDGRYAPEVLALRRKVRMR 62

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           S   G + ++   S              A +Y+  +L A     P       V L   P 
Sbjct: 63  SAELGFYTALSAESLGGEGLGP-----QAAVYIQERLNAH--CGPERHLVQTVVL---PS 112

Query: 170 VHKDWAPKIFSREYDP---TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              +    +          T +  +      +  GL+E   G+D+  + ++  +  D   
Sbjct: 113 PFTNGLSPVLKHLDPAVLNTVRDELASGDKTMCFGLSEPDAGSDVFGMRTRAVRDGDQWV 172

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                +W  ++P +D  ++ A  +    R     +       +  G     +   +G+  
Sbjct: 173 LNGTKQWITNAPYADYAMVFAVTDEEKARTHKGGITGFFLPANTPGFSVPSVIPTMGHLG 232

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                +   N        LG ++       D      L  A   +     +L +A+ YA+
Sbjct: 233 ADIGIISLENVRVPDTHRLGPVDRGLSVALDGVNAGRLSMAASCLGLAEWALQQAVDYAK 292

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +   ++  +A+ A+DI A  ++    A   D     ++E         I 
Sbjct: 293 VRKTFGQPIGEHQAVQIMLAECAMDIYATKSMVRHCAWLVDNNLPATKE-------VSIV 345

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    +M   V   AM+  GG G   E  +   YR +    I  G+       +   L  
Sbjct: 346 KASATEMTGRVFDRAMQVHGGMGLTNELRLEAGYRFARTMRIPDGTSEIQRRTIARRLLD 405

Query: 461 GTNLF 465
           G   F
Sbjct: 406 GDMAF 410


>gi|83943357|ref|ZP_00955816.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Sulfitobacter sp. EE-36]
 gi|83845589|gb|EAP83467.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Sulfitobacter sp. EE-36]
          Length = 385

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 117/358 (32%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               + +  +G      D  +  +              L     +  +   +   A  + 
Sbjct: 41  KEAWKSAGDNGFLAMFADEKYGGMGLDDFRFDMVLNEELGKVESSFFITLHNRIVAPYLQ 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      + P I S                 + +G+TE   G+D+AAI ++ ++  +
Sbjct: 101 KFGTDDQRDRYMPGIVSG-------------DTILAIGMTEPGCGSDLAAIKTRAERQGN 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  +  ++  +++ A+ +       +          G    +   K+G ++
Sbjct: 148 HWVINGSKTYISNGQIAGLYLIAAKTDPDNPRS-IGLFWVQEGAEGFSKGQNLKKMGLQA 206

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F N        +   T   + M        L  A   ++    +    + + +
Sbjct: 207 QDTSELFFDNVKVPASDLVGDGTDGFKLMMTNLAEERLVGADGYLARAERAFEITMEFIK 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +      +  +AD    +    A     A +  + +  +E       MA   
Sbjct: 267 ERKAFGKPVGTFQNSRFVMADARTKLDVGWAYLDHCAMAHIDGECTAE-------MAAQA 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  ++   +I   ++  GG+GY+EE  I+R Y ++  + I  G+   M   +   L
Sbjct: 320 KLFTSEIEGEIIDACLQLHGGAGYMEEYEISRLYVDARISRIYAGTSEIMREIIGRGL 377


>gi|41409975|ref|NP_962811.1| FadE20_3 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398808|gb|AAS06427.1| FadE20_3 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 132/384 (34%), Gaps = 38/384 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV----RKQAHKIRA 137
           P    +   G+ WD+  F  A           GL                 R  A  +  
Sbjct: 28  PNHEKWERDGQ-WDRSLFVEAGK--------LGLLGFSVPERLGGPGVDDFRYNAIVVDE 78

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            +    A       +   +    +V L TTP   + W P + + E               
Sbjct: 79  LQRAGAAAEAIAFSLQNDIVLPYLVEL-TTPEQQRRWLPGVVTGE-------------TV 124

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
           +G+ +TE   G+D+A I +   +  D  Y ++G K F+S+       ++A          
Sbjct: 125 LGIAMTEPGTGSDLAGIRTTAVRDGDH-YLVNGAKTFISNGQVGDLFVVAVRTAPDRHKG 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
           +  L+ D    G    R   KIG  +  T EL F++        L     G  + MK L 
Sbjct: 184 LSLLVVDADTPGFGRGRNLEKIGLHAQDTSELSFTDMRVPAENLLEAEGRGFYQLMKNLP 243

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A+ +V+      AE + Y ++ H  G  +      +  +A++A +I  A     
Sbjct: 244 QERLSLAVGAVAAAEAVFAETLDYVKQWHAFGAPIAAFQNSQFVLAELATEIDVARTYLD 303

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
               +    +  +  AA  +        W   +        ++  GG GY+ E  +AR +
Sbjct: 304 DCLAAHLAGELTAARAARLKW-------WTTDLQVRTADRCLQLHGGYGYMREYGVARAF 356

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
            ++   +I  G+   M   +   L
Sbjct: 357 VDARIQTIYGGTNEIMKTIIAKDL 380


>gi|66810674|ref|XP_639044.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4]
 gi|74854645|sp|Q54R47|GCDH_DICDI RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|60467671|gb|EAL65690.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4]
          Length = 420

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 138/368 (37%), Gaps = 49/368 (13%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             ++R     G+  +       P     +H         + ++++G+  + SV S     
Sbjct: 83  REIMREYGKMGMLGAT-----IPAYGGVSHVAYGLMANAVEKVDSGYRSAMSVQSSLVMH 137

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T      +   + S               +    GLTE   G+D A + ++  K
Sbjct: 138 PINTFGTDAQKSKYLDGLASG-------------DLVGCFGLTEPNAGSDPAGMQTRAVK 184

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            S G Y L+G K W  +SP++D F++ A+VE G +  F++     +    GL   +++ K
Sbjct: 185 NSAGNYVLNGTKTWITNSPIADVFVVWAKVENGDIRGFVL-----EKGMKGLSAPKIEGK 239

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           +  R++ T  +   +       +  ++    GP         L+ A   +    +  AE 
Sbjct: 240 LSLRASITGMIVMEDVEVPPTAMFPEVKGLRGP------FSCLNKARYGIGWGSLGAAEF 293

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A  Y   R   G  L    + ++ +AD+A +I+      +++    D  K+  E  
Sbjct: 294 CYSTARQYGLDRKQFGKPLAANQLYQKKLADMATEISLGLQACYQVGRLIDAGKATPER- 352

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   + K   C  +  +  ++ + +GG+G  +E  + RH       +   G+ +  
Sbjct: 353 ------ISLIKRNSCGKSLDIARQSRDMLGGNGIADEYHVIRHAANLETVNTYEGTHDIH 406

Query: 451 VLDVLNLL 458
            L +   +
Sbjct: 407 ALILGRAI 414


>gi|224367429|ref|YP_002601592.1| acyl-CoA dehydrogenase family protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223690145|gb|ACN13428.1| acyl-CoA dehydrogenase family protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 601

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/496 (17%), Positives = 176/496 (35%), Gaps = 60/496 (12%)

Query: 82  PQLHAYGPGG-ERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           P L      G    D KV+ HP   +L+      G   S +    +              
Sbjct: 55  PILDEMDKNGPALVDGKVKVHPQVRSLMAAYGEGGWIGSSFPEDHDGEGLPTIVANACRF 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           ++  A   A      +  +A ++    +  +   + P + +  +  T             
Sbjct: 115 IFAAANYSASVFPELTAGAAELILTFGSKELIDTYLPPMLAGRWQGT------------- 161

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252
           + LTE   G+ ++ IT+       G Y + G K F+S+   D       +MLA++EG   
Sbjct: 162 MALTEPHAGSSLSDITTTAFPTDKGFYAIKGQKTFISAGDHDGVDNVVHLMLARIEGEPA 221

Query: 253 ----VGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGD 301
               +  F+VP+L  +       N +    + +K+G R     EL   E ++  GFL+G+
Sbjct: 222 GSKGISLFVVPKLRPETGGKFVSNDVVVAGVYHKLGYRGAPITELSIGEKNDCRGFLVGE 281

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILI 350
            N     +  M     L   + + +    +   A+ YA  R                 +I
Sbjct: 282 KNRGLACMFQMMNEARLGVGLGATAIATAAYYAALDYAMERPQGRRLSEKNPATPQVPII 341

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCC 405
           + P +KR +      +  + +L  +     D     +   +        ++ PI K +  
Sbjct: 342 EHPDVKRMLLFQRAIVEGSLSLCLQCCLYTDLAKTTQGDEQQRNLLLLDLLTPIAKSYPS 401

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463
           +M     ++A++C GG GY E+  + +++R+S  + I  G+     +D+L   ++     
Sbjct: 402 EMGILSTSQAIQCFGGYGYCEDFPVEQYFRDSRIHPIHEGTTGMQGMDLLGRKMVMNNGR 461

Query: 464 LFEQLFSTLEQDLGSS---------GKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
                   + + +  +            +   L     +     G+A     +  LA + 
Sbjct: 462 AAMLFVEEVNKAIAKATAVPETATYAGLLAQALERLQQVTAHLFGVAGEKGPETFLADAT 521

Query: 515 AALYRAGMNDIADVFL 530
             L   G+  IA  +L
Sbjct: 522 LFLEMTGIIAIAWQWL 537


>gi|126434102|ref|YP_001069793.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233902|gb|ABN97302.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 379

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/359 (21%), Positives = 132/359 (36%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
            A +R +  +G     +   +  +  +           ++A   AG L S         +
Sbjct: 40  RAFIRAAGENGFLGFEFASEYGGLGIEDFRYNAVMTEEVVASGMAGDLFSMQNDIIVPYL 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +TT      W P     E                 LGLTE   G+D+AAI +  ++  
Sbjct: 100 RDLTTAEQRDRWLPAFTRGEN-------------VTALGLTEPGAGSDLAAIKTSARRDG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D +       +  S    D  I+L +  G         +  +    G    R  +KIG R
Sbjct: 147 DHLVLNGQKTFITSGATCDLAIVLVRT-GERDGRGTTFVAVENGTPGFERGRPMHKIGRR 205

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T EL F +    +   +G+     G          L  A+ +V+  R +L   + +A
Sbjct: 206 AQDTAELFFDDCRVPVSNIVGEPGRGFGCAIANLPRERLSIAVAAVASARHALELGLEHA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R   G  L     ++  IA++  DI        R   + ++ +  + EAA A+  A  
Sbjct: 266 RQRSAFGAPLAQLQSVRMQIAEMHTDIVVLQEYVDRCVVALNDGELTAAEAAGAKYKA-- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 ++   V+   ++  GG GY+EE  IAR +R++    I  G+   M   V   +
Sbjct: 324 -----TELQWEVLDRVLQLFGGYGYMEEYPIARMWRDARIQRIYGGANEVMKDLVGRAV 377


>gi|92116366|ref|YP_576095.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14]
 gi|91799260|gb|ABE61635.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14]
          Length = 404

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 122/361 (33%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL+       +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLNGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P++ + E+                 GLTE   G+D   + ++ +K+S
Sbjct: 122 YAYGDESQRKKYLPRLATGEW-------------VGCFGLTEPDAGSDPGGMKTRAEKVS 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++  +         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKTWISNAPIADLFVVWVRS--AAHDNQIRGFVLEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T E+        ++ + N+             L+ A   +S   +  AE     A  
Sbjct: 227 ASCTGEIVMDGV---VVPEENLLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCMHRARK 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD+  DIA     S R+    DE K        A  M 
Sbjct: 284 YVLERKQFGRPLAATQLVQKKLADMQTDIALGLQGSLRVGRLMDEGK-------MAPEMI 336

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +   
Sbjct: 337 SIVKRNNCGKALDIARMARDMHGGNGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRA 396

Query: 458 L 458
           +
Sbjct: 397 I 397


>gi|163839310|ref|YP_001623715.1| acyl-CoA dehydrogenase E19 [Renibacterium salmoninarum ATCC 33209]
 gi|162952786|gb|ABY22301.1| acyl-CoA dehydrogenase E19 [Renibacterium salmoninarum ATCC 33209]
          Length = 390

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 151/409 (36%), Gaps = 41/409 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS   Q+L+        ++ A  P   + D+    P  + ++++    GL    +   
Sbjct: 7   YGLSEDYQDLSDTVRDFADEVVA--PVSAKHDEEHSFP--YEVVKQMGEMGLFGLPFPEE 62

Query: 124 FEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              +         A   L  + Q  A  L +     A  +    T    + W P + S  
Sbjct: 63  HGGMGGDYFALALALEQLGRVDQSVAITLEAGVSLGAMPIHRFGTEAQKEQWLPMLASG- 121

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                           G GLTE   G+D     ++  ++ DG + ++G+K F+++  +D 
Sbjct: 122 ------------QALAGFGLTEPEAGSDAGGTKTKA-RLEDGSWIINGNKEFITNSGTDI 168

Query: 243 ---FIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
                + A               +  +L   +  G   ++  NK+G  ++ T  L  ++ 
Sbjct: 169 TRLVTVTAVTGESTRADGSIKKEISTILVPTNTQGFKAEKAYNKVGWNASDTHPLTLADV 228

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGIL 349
                  L V      +   L  LD   ++++ +     +  + E++ YA+ R   G  +
Sbjct: 229 RVPEANLLGVEGRGYANF--LSILDEGRIAIAALATGAAQGCVDESVRYAKERMAFGNNI 286

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  IA +A     A    +  A      KS   EAA A+++A        + A 
Sbjct: 287 GKYQAIQFKIARMAARAHTARLAYYDAAARMQAGKSFKTEAAIAKMIAG-------EAAM 339

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +A +  GG G++ E  ++RHYR+S    +  G+    ++ +   L
Sbjct: 340 DNARDATQVFGGYGFMNEFRVSRHYRDSKILEVGEGTTEVQLMLIARDL 388


>gi|108805284|ref|YP_645221.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
 gi|108766527|gb|ABG05409.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941]
          Length = 395

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/411 (19%), Positives = 148/411 (36%), Gaps = 44/411 (10%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           + EL GE       +  A  A+          PG    D  + +P    +  +    G  
Sbjct: 2   DFELSGEQ--REVRERAAEFADREVA------PGARERDLNDVYP--REVFEKLAGMGFM 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWA 175
                  +    R     + A      A    G  ++   ++ ++  L   T    + W 
Sbjct: 52  GLCVPEEYGGAGRDFLSYVLAIEELSRADAGVGVTLAVHTSAGTLPILAYGTEEQKRRWV 111

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P             P+ +        LTE   G+D AAI ++ +++  G       +W  
Sbjct: 112 P-------------PLARGERVGCFALTEPEAGSDAAAIEARAERVEGGYRISGHKQWIT 158

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   I+ A+    V  F+VP         G+   +   K+G  S  T ++     F
Sbjct: 159 NGRVAGTMILFARAPEGVTAFIVPM-----DAEGVSLGKHARKMGVISATTDDVLLDGVF 213

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILI 350
                 L      +     L  LD   + ++G  + +AEA       +A RR   G  + 
Sbjct: 214 VPEEDRLGEEGKGLR--VALGTLDPGRIGIAGQALGIAEAAFRCAAEHAVRRRAFGRPIA 271

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +   +   +AD+ + I AA  L++  A   D     +E  A A       K +  ++A  
Sbjct: 272 EHQAISFKLADMQVKIRAARLLAYEAAWMKDRGMRVTEAGARA-------KLYASQVANE 324

Query: 411 VIAEAMECIGGSGYIE-ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++ +GG GY++ E  + R YR++    I  G+     + +   + +
Sbjct: 325 VAYEAVQILGGRGYMKDESPVERLYRDARVTEIYEGTSEVQRIVLSRSILR 375


>gi|326778232|ref|ZP_08237497.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326658565|gb|EGE43411.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 608

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/539 (16%), Positives = 183/539 (33%), Gaps = 77/539 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI-HDGLHCSIWD 121
             +      +    A+ N P                F  ++ A +       GL      
Sbjct: 46  ARLAENELADSYADADRNPPVFDPETKTAPV--PASFKKSYQAFMDSEYWRLGL-----P 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                    ++     A L L A        S    +  ++         K         
Sbjct: 99  EEIGGTTSPRSLIWGYAELLLGANPAVWMYSSGPAFAG-ILFEEGNDEQKKIAE------ 151

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                      +      + LTE   G+D+ A  ++  +  DG + + G K F++S   D
Sbjct: 152 --------IAVEKQWGSTMVLTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHD 203

Query: 242 A-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                   +LA+ EG       +  F+VP+   D      G  NG+    +++K+G +++
Sbjct: 204 MSENIIHYVLARPEGAGPGTKGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKAS 263

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F +     G+L+GD +     +  +     +     +++ +      A+ YA+ 
Sbjct: 264 NTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKE 323

Query: 342 RHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           R                  +   P ++R++           +L    A+  D  + +   
Sbjct: 324 RVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAA 383

Query: 390 AAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              A+ +        PI K +  + +   +A++++  GGSGY++E  + ++ R++  +++
Sbjct: 384 GEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTL 443

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKG 499
             G+      D     ++         L   +++ L G+ G + +    DS++    D  
Sbjct: 444 YEGTTAIQGQDFFFRKIVRDQGASLNTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLE 503

Query: 500 L--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFNAAH 553
                 +T+  A       +Y+ G+N         R L         + +L G   AA 
Sbjct: 504 AIVGTMITDLTATGEDVKNIYKVGLNT-------TRLLMASGDVVVGYLLLKGAAVAAE 555


>gi|328545885|ref|YP_004305994.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326415625|gb|ADZ72688.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 403

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 130/371 (35%), Gaps = 37/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A+       GL        +        A+ + A  +  +           S      +
Sbjct: 61  RAIFAEMGELGLLGVTLPEDYGCAGASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 120

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K + P++ S E+                 GLTE   G+D A + ++ +KI 
Sbjct: 121 YAYGSEEQRKKYLPRLASGEF-------------VGCFGLTEPDAGSDPAGMRTRAEKID 167

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+ E   G   +   + +    GL   ++  K+  R
Sbjct: 168 GGYRLKGSKMWISNSPIADVFVVWAKSEAHDGA--IRGFVLEKGMKGLSAPKIGGKLSLR 225

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+           LL +++   GP         L+ A   +S   +  AE   + 
Sbjct: 226 ASITGEIVMDGVEVSEDALLPNVSGLKGP------FGCLNRARYGISWGAMGAAEDCWHR 279

Query: 340 RR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R     R   G  L    + ++ +AD+  +IA     S R+   FDE K        A 
Sbjct: 280 ARQYGLDRKQFGRPLAQTQLFQKKLADMQTEIALGLQASLRVGRLFDEGKV-------AP 332

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  V  +A +  GG+G  EE  + RH +     +   G+ +   L +
Sbjct: 333 EMISIVKRNNCGKALDVARQARDMHGGNGIQEEYHVMRHAQNLETVNTYEGTHDVHALIL 392

Query: 455 LNLLEKGTNLF 465
                     F
Sbjct: 393 GRAQTNLQAFF 403


>gi|294630414|ref|ZP_06708974.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292833747|gb|EFF92096.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 608

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 91/555 (16%), Positives = 185/555 (33%), Gaps = 79/555 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFADADRNPPV---FDP---ETNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWAYAELILGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNEVQKHIAKIAVERQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQ 273
            K F++S   D        +LA+ EG   G   +   L             G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYEFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDKHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMYTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +  S E A   ++ PI K +  + A   +A++++  GGSG+++E  I 
Sbjct: 373 VQDEIQVKEANGEDASAEHALNDLLLPIVKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R+S  +++  G+      D     ++         L   +++   LG+ G ++    
Sbjct: 433 QYIRDSKIDTLYEGTTAIQGQDYFFRKIVRNQGAALNSLAEDIKKFLALGTGGAELAESR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   +   +A        +Y+ G+N         R L         + 
Sbjct: 493 EYLAKAAVELEAVVGVMLTDLAATEQDVKNIYKVGLNT-------TRLLLASGDVVVGYL 545

Query: 544 MLHGRFNAAHIIDSL 558
           +L G   AA  +++ 
Sbjct: 546 LLKGAAIAAEKLETA 560


>gi|224826999|ref|ZP_03700097.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
 gi|224600832|gb|EEG07017.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002]
          Length = 395

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 137/391 (35%), Gaps = 38/391 (9%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R ++ +       ++      GL     D      +   A+ + A  +
Sbjct: 38  QERLMPRILTANREERFD-----REIMSEMGELGLLGCTIDTHGCAGLSHVAYGLIAREV 92

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S      +    T      + PK+ + E+                 
Sbjct: 93  ERVDSGYRSAMSVQSSLVMHPIWAYGTEAQKDKYLPKLATGEW-------------VGCF 139

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D A + ++ +K+  G        W  +SP++D F++ A+ +       +  
Sbjct: 140 GLTEPDAGSDPAGMKTRARKVDGGYQLKGSKMWITNSPIADVFVVWAKDDDGE----IRG 195

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + +    GL   ++  K   R++ T E+   + F     + N+  G          L+ 
Sbjct: 196 FVLEKGMQGLSAPKIHGKFSLRASITGEIVMDDVFVP---EENLLPGVKGLKGPFGCLNK 252

Query: 321 AIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           A   ++   +  AE   +A R     R   G  L    +++  +A++  +IA   A + +
Sbjct: 253 ARFGIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQLIQLKLANMQTEIALGLAAALQ 312

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           +    D  ++       A  M  + K   C  A  +   A +  GG+G  +E  + RH  
Sbjct: 313 VGRLMDAGRA-------APEMISLIKRNNCGKALDIARVARDMHGGNGIADEFHVIRHVM 365

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
              A +   G+ +   L +L   + G   F 
Sbjct: 366 NLEAVNTYEGTHDVHAL-ILGRAQTGIQAFA 395


>gi|89902828|ref|YP_525299.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89347565|gb|ABD71768.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 398

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 140/406 (34%), Gaps = 38/406 (9%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E A  A Y   +L        R ++ +      A+ R     GL       ++   
Sbjct: 23  RMVREAA--AAYCQDKLQPRVIEAFRKEQTDV-----AVFREMGELGLLGPTIPEAYGGP 75

Query: 128 VRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A+ + A  +  +       +   S      +    T    + + PK+ + E+   
Sbjct: 76  GLSYVAYGLIAREVERVDSGYRSMMSVQSSLVMLPIFDFGTEAQKQKYLPKLATGEW--- 132

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                         GLTE   G+D  ++ S+  K++ G        W  +SP++D F++ 
Sbjct: 133 ----------IGCFGLTEPDHGSDPGSMASRAHKVAGGYKLSGAKMWISNSPIADVFVVW 182

Query: 247 AQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+     G    +   + D    GL    +  K+G R++ T E+     F          
Sbjct: 183 AKEVSESGKVGPIRGFVLDKGMAGLSAPAIHGKVGLRASITGEIVMDGVFCPEENAFPEV 242

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
            G          LDSA   ++   +  AE        Y   R   G  L    ++++ +A
Sbjct: 243 RGLK---GPFTCLDSARYGIAWGTLGAAEDCWLRAHRYVMDRKQFGRPLAANQLIQKKLA 299

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +IA       RL    DE  +  E       +  I K   C  A  +   A + +G
Sbjct: 300 DMQTEIALGLQGCLRLGRMKDEGTASVE-------ITSILKRNSCGKALDIARLARDMMG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G+G  +E  +ARH       +   G+ +   L +L   + G   F 
Sbjct: 353 GNGISDEFGVARHLVNLEVVNTYEGTHDIHAL-ILGRAQTGIAAFA 397


>gi|13474205|ref|NP_105773.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14024957|dbj|BAB51559.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 387

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 128/386 (33%), Gaps = 33/386 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   +        L  ++I  GL+ +                +   +   
Sbjct: 23  ELYPHEREVERTGVLR-RELIEELKAKAIEAGLYAANMPADVGGAGLDTVTWLLYEKELG 81

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A           V   S + L  TP   + +               P  +      L +
Sbjct: 82  RANYALHWTC---VARPSNILLAGTPEQREKYL-------------FPCIRGEKWDCLAM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL---- 257
           TE   G+D+  + +   +  D  + L+G K F+S    +D  I+                
Sbjct: 126 TEPGAGSDLRGMKASAVQDGDD-WVLNGTKHFISHADLADFAIVFMASGEEDSPRGKRKK 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +     D    G   +     + +R      LEF +       +LG+++           
Sbjct: 185 ITAFFVDKGTKGFTVRDGYRNVSHRGYTNAILEFDDCRLPASQVLGEVHKGFDVANSWLG 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L      +     +L  A+ YA +R   G  +     +   +AD+A ++ AA  + F
Sbjct: 245 ATRLQVGATCLGRAERALGHAVEYAAQRQQFGQQIGKFQGVSFKLADMATELKAADLMVF 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                +D+     ++ A A++ A        +M   V  EA++  GG G +++  + R +
Sbjct: 305 EAGWKYDQGTVTDQDMAMAKLKA-------TEMLAFVADEAIQIHGGMGLMDDLPLERIW 357

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+       +   L +
Sbjct: 358 RDARVERIWEGTSEIQRHIISRALLR 383


>gi|90422551|ref|YP_530921.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104565|gb|ABD86602.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 396

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 123/357 (34%), Gaps = 33/357 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MT 166
           R     GL  +    +F             AR           +MS   +   +  L   
Sbjct: 60  RSMGELGLLGATIPETFGGAGLNHVCYGLIAREVERVDSGYRSMMSVQSSLVMVPILEFG 119

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                + + PK+ + E+                 GLTE   G+D   + S+ +K+  G  
Sbjct: 120 NEATRQKYLPKLATGEW-------------IGCFGLTEPDHGSDPGGMISRARKVDGGYR 166

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+ +       +   + +    GL    +  K+G R++ T
Sbjct: 167 LSGAKMWITNSPIADVFVVWAKDDAGE----IRGFVLEKGWPGLSAPAIHGKVGLRASIT 222

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            E+   + F           G          L+SA   ++   +  AE     A  Y   
Sbjct: 223 GEIVLDDVFCPEENAFPEVRGLK---GPFTCLNSARYGIAWGALGAAEDCYLRARQYVLD 279

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+  +I        RL    DE  +  E       +  I K
Sbjct: 280 RKQFGRPLATNQLVQKKLADMLTEITLGLQGCLRLGRLKDEGAAPVE-------ITSIMK 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 333 RNSCGKALEIARAARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAI 389


>gi|108797090|ref|YP_637287.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866175|ref|YP_936127.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108767509|gb|ABG06231.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692264|gb|ABL89337.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 588

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/554 (18%), Positives = 179/554 (32%), Gaps = 70/554 (12%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWD- 95
             D LL   +                   +       ++A     P           +D 
Sbjct: 10  DLDFLLFEWLRVDELTQRPRFADHSHDTFTGVLDLCEQLAERYFAPHNKKSDAHEPTFDG 69

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV   P             L     D               A      A L     +  
Sbjct: 70  EKVTVIPEVKEAWEAFAAADLLAMGMDAELGGAQLPATVAQAAFAWISAANLATSGYLML 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++A   T      +               PM     +  + L+E + G+ +A I
Sbjct: 130 TIANANLLAEFGTAEQIDRFV-------------RPMLAGRFSGTMALSETQAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263
           T++ +   DG Y L G K ++S    +       ++LA++ G       +  F+VP+ L 
Sbjct: 177 TTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNLVLAKIPGGPPGTKGISLFVVPKYLV 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGP 308
                 G  N +    L +K+G R      L F              G+L+G+ +     
Sbjct: 237 AEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGEGVFNPGGEPGAVGYLVGEPHRGITY 296

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKR 357
           +  M     L   + +V+       +++ YAR R                 +I+   +KR
Sbjct: 297 MFRMMNEARLGVGMGAVALGYTGYLKSVKYARERPQGRPVTAKDPATPQVPIIEHADVKR 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +      +  A AL+   A   D   ++        I+ P+ K W  +      + A++
Sbjct: 357 MLLAQKSYVEGALALALYCARLVDLGDNQD----LLDILTPVAKSWPSQWCLEANSLAIQ 412

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GY  E  + +HYR++  N I  G+     LD+L    K T         +   L 
Sbjct: 413 VHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSLDLLG--RKVTQRGGASLRAVGGALA 470

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTE-----------KIALASSAAALYRAGMNDIA 526
           ++         ++ SL +E     + L             + A+A+S   L   G   IA
Sbjct: 471 ATVAAAGECGGEAASLAEELDARWQRLVAVTTAMFGSGDIEAAMANSVVYLEAFGHVVIA 530

Query: 527 DVFLENRFLDNCHS 540
            ++LE        +
Sbjct: 531 WMWLEQFLAAEGRT 544


>gi|254774390|ref|ZP_05215906.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 405

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L  ++   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 53  DLRDQAKKMGLFGYAIPQQWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W               PM    V     LTE   G++ A + ++     D
Sbjct: 113 GFGTEAQKARWLE-------------PMAAGDVVASFALTEPGAGSNPAGLRTKAVADGD 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P+++ F++ A+          +   L      G+       K+G  
Sbjct: 160 NWVISGQKRFITNAPVANLFVVFARTRPADDQGPGIAVFLVPADAAGVQVGAKDAKMGQE 219

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 220 GAWTADVSFDDVRVGGDALIGGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVSY 279

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  +AD   ++ A  AL    A  +   + R            
Sbjct: 280 ASTATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRRVA-------PS 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L + + L
Sbjct: 333 AAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNL 392

Query: 459 EKGTN 463
            K   
Sbjct: 393 VKAAQ 397


>gi|319790823|ref|YP_004152463.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593286|gb|ADU34352.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 399

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 137/397 (34%), Gaps = 37/397 (9%)

Query: 71  QELARMAN--YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           + + R A   Y   +L      G R    E  PA    +      GL        +    
Sbjct: 23  ERMIRDAANAYCQERLAPRVIEGFRTG--ETDPAIFREMG---ALGLLGPTIPEQYGGPG 77

Query: 129 RKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               A+ + A  +  +           S      +    T    + + PK+ + E+    
Sbjct: 78  LNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIFEFGTEAQKQKFLPKLATGEW---- 133

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                        GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A
Sbjct: 134 ---------IGCFGLTEPDHGSDPGSMVTRAKKVPGGYSLSGAKMWISNSPIADVFVVWA 184

Query: 248 QVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +     G    +   + +    GL    +  K+G R++ T E+     F     + NV  
Sbjct: 185 KEVSESGTVGPIRGFVLEKGMKGLSAPAIHGKVGLRASITGEIVMDGVFCP---EENVFP 241

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361
                      L+SA   +S   +  AE     A  Y   R   G  L    ++++ +AD
Sbjct: 242 EVQGLKGPFTCLNSARYGISWGAIGAAEDCWHRARQYTLDRKQFGRPLAANQLIQKKLAD 301

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I      S RL    DE  +  E       +  I K   C  A  +   A + +GG
Sbjct: 302 MQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCGKALDIARLARDMMGG 354

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G  +E  +ARH       +   G+ +   L +   +
Sbjct: 355 NGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAI 391


>gi|324998483|ref|ZP_08119595.1| acyl CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 93/402 (23%), Positives = 146/402 (36%), Gaps = 39/402 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +    E + L E V   T +E+        P L A+   GE            +L  ++ 
Sbjct: 7   AWTTPERQALREVVTDFTTREI-------VPNLAAWEDAGE---------LPRSLHEKAA 50

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL    +                     +  +       S  V SA     +  P + 
Sbjct: 51  ELGLFELGFPEKAGGAGE-------FIDFLVANEAILLAGGSTGVCSALFTHSIGAPHIA 103

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
               P         T   P         LG+TE   G+D+ AIT++ ++  D  Y +SG 
Sbjct: 104 AAGDP-----WQIDTFVRPALAGQKIAALGVTEPGTGSDVGAITTRARRDGDD-YVVSGA 157

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           K F++S     F+  A   G  G   V  L+ +    G        K+G   + T EL F
Sbjct: 158 KTFITSGTRADFVTTAVRTGGPGHRGVSLLIIESDRPGFAVTSKLKKMGWLCSDTAELSF 217

Query: 292 SNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                 L   +    TG V+ M+      L  A  + +    SL  A  +AR R   G  
Sbjct: 218 DEVRVPLRNLIGDEGTGFVQIMQRFESERLLMAAQAAATAERSLHLARQWARDRVTFGEP 277

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L  + V++  +AD+A ++A A      +A  + E     EE A A+  A           
Sbjct: 278 LAHRQVIRHKLADMAREVAVARTFVRDVAVRWSEEGHTPEEVAMAKNAAVA-------AC 330

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            +V+  A++  GG GY+ +  + RHYR+S    I  G+   M
Sbjct: 331 DSVVNAAVQIHGGMGYMRDSEVERHYRDSRILGIGGGTTEMM 372


>gi|182437578|ref|YP_001825297.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466094|dbj|BAG20614.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 608

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/539 (16%), Positives = 183/539 (33%), Gaps = 77/539 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI-HDGLHCSIWD 121
             +      +    A+ N P                F  ++ A +       GL      
Sbjct: 46  ARLAENELADSYADADRNPPVFDPETKTAPV--PASFKKSYQAFMDSEYWRLGL-----P 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                    ++     A L L A        S    +  ++         K         
Sbjct: 99  EEIGGTTSPRSLIWGYAELLLGANPAVWMYSSGPAFAG-ILFEEGNDEQKKIAE------ 151

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                      +      + LTE   G+D+ A  ++  +  DG + + G K F++S   D
Sbjct: 152 --------IAVEKQWGSTMVLTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHD 203

Query: 242 A-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                   +LA+ EG       +  F+VP+   D      G  NG+    +++K+G +++
Sbjct: 204 MSENIIHYVLARPEGAGPGTKGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKAS 263

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F +     G+L+GD +     +  +     +     +++ +      A+ YA+ 
Sbjct: 264 NTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKE 323

Query: 342 RHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           R                  +   P ++R++           +L    A+  D  + +   
Sbjct: 324 RVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAA 383

Query: 390 AAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              A+ +        PI K +  + +   +A++++  GGSGY++E  + ++ R++  +++
Sbjct: 384 GEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTL 443

Query: 443 LLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKG 499
             G+      D     ++         L   +++ L G+ G + +    DS++    D  
Sbjct: 444 YEGTTAIQGQDFFFRKIVRDQGASLNTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLE 503

Query: 500 L--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFNAAH 553
                 +T+  A       +Y+ G+N         R L         + +L G   AA 
Sbjct: 504 AIVGTMITDLTATGEDVKNIYKVGLNT-------TRLLMASGDVVVGYLLLKGAAVAAE 555


>gi|116694314|ref|YP_728525.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528813|emb|CAJ95160.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 388

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 124/363 (34%), Gaps = 35/363 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H  +   I  G    I   +   +                  L    L++     + ++ 
Sbjct: 46  HEAMTGLIDFGYFGGILPEADGGMGLDYPTWAVMMEEAGYCWLSLRILLNGLNIVSGIIN 105

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      +   +   E  P              + ++E   G+++A + ++  K  D
Sbjct: 106 AYGTEDQKARFVRPLLRNERKP-------------FVSISEPDVGSNVAEVKTRADKRGD 152

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
                    W  +   +D  I++A+       G +  FLV R +       +      + 
Sbjct: 153 TYVLNGSKLWITNGMFADFGIVVARTYSETCNGELSLFLVERDVTKYDATPV------DV 206

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +  RS  T    F N       L+G        +        L+ A+ +V   + +L  +
Sbjct: 207 VFTRSTGTAAFTFENAEVPAANLIGTEGQGLRQILIGLNFGRLNVAMGAVGAAQCALDLS 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA +R   G  +    ++++ I D+ + + AA +L +R A +     +R+E       
Sbjct: 267 IDYALQRKQFGRQIGSFQLVQKHIVDMTMRVQAARSLGYRAARAMQNGTARTE------- 319

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              I K +  + A  V    ++  GG GY  +  I R +R++    I  G+     L + 
Sbjct: 320 -CSIAKLYATEAAFEVANLGLQVHGGIGYATDYPIERIFRDTRGGMIPEGTTEIQTLIIG 378

Query: 456 NLL 458
             +
Sbjct: 379 REI 381


>gi|315442919|ref|YP_004075798.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315261222|gb|ADT97963.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 382

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 12/277 (4%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
           T   P  +      L +TE  GG+D+  +T++  +  D  + ++G K +++S +   +++
Sbjct: 110 TYVRPTLRGEKIGSLAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVV 168

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A   G  G   +  ++ D    G    R  +K+G RS+ T EL +++       ++G  
Sbjct: 169 TAARTGGPGAAGISLIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYTDVRVPAANVVGAE 228

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +    +   +  A  + S  +  L     + R R   G  LI +  ++  +A++
Sbjct: 229 NTGFLQIAAAFVSERVGLAAQAYSSAQRCLDLTAEWCRNRQTFGKPLIARQTVQSTLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           A  I  A   +  +        +    E  +A+  A     W       V  +A++  GG
Sbjct: 289 ARRIDVARVYTRHVVERQLAGDADLITEVCFAKNTAVEAGEW-------VANQAVQLFGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY+ E  + R YR+     I  G+   +       L
Sbjct: 342 MGYMTESEVERQYRDMRILGIGGGTTEILTSLAAKTL 378


>gi|222082574|ref|YP_002541939.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
 gi|221727253|gb|ACM30342.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84]
          Length = 386

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 99/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++       L+G K F+S  
Sbjct: 101 CEGEQREKYLLPAVRGEKVDALAITEPDAGSDMRGMKCAARQDGSDF-VLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G    +    + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILKGYESLSHRGYHNSVLNFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LGD++       +      L  A   V   R     A+ YA  R   G  + 
Sbjct: 220 CRLPKSQVLGDVHRGFDIANEWLYGTRLTVAATCVGRARRVFDLALPYAAERKQFGRPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +A++  +I AA  L+   A   D   S       A       K +  +M   
Sbjct: 280 ANQGVSFKLAEMITEIDAADLLTLSAAWRLDAGLS-------ANREVASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|108798473|ref|YP_638670.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867574|ref|YP_937526.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768892|gb|ABG07614.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693663|gb|ABL90736.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 379

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 135/377 (35%), Gaps = 32/377 (8%)

Query: 93  RWDKVEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
             D V    AW        A +R +  +G     +   +  +  +           ++A 
Sbjct: 22  DHDAVPHVEAWENSGTVDRAFIRAAGENGFLGFEFGSEYGGLGIEDFRYNAVMTEEVVAS 81

Query: 146 LEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             AG L S         +  +TT      W P     E                 LGLTE
Sbjct: 82  GMAGDLFSMQNDIIVPYLRDLTTAEQRDRWLPAFTRGEC-------------VTALGLTE 128

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+AAI +  ++  D +       +  S    D  I+L +  G         +  +
Sbjct: 129 PGAGSDLAAIKTSARRDGDHLVLNGQKTFITSGATCDLAIVLVRT-GERDGRGTTFVAVE 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G    R  +KIG R+  T EL F +    +   +G+     G          L  A
Sbjct: 188 NGTPGFERGRPMHKIGRRAQDTAELFFDDCRVPVSNIIGEPGRGFGCAIANLPRERLSIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +V+  R +L   + +AR+R   G  L     ++  IA +  DI        R   + +
Sbjct: 248 VAAVASARHALELGLEHARQRSAFGAPLAQLQSVRMQIAGMHTDIVVLQEYVDRCVVALN 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + EAA A+  A        ++   V+   ++  GG GY+EE  IAR +R++    
Sbjct: 308 DGELTAAEAAGAKYKA-------TELQWEVLDRVLQLFGGYGYMEEYPIARMWRDARIQR 360

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   V   +
Sbjct: 361 IYGGANEVMKDLVGRAV 377


>gi|319780172|ref|YP_004139648.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166060|gb|ADV09598.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 120/360 (33%), Gaps = 32/360 (8%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++I  GL+ +                +   +    A           V   S + L  TP
Sbjct: 48  KAIEAGLYAANMPADVGGAGLDTVTWLLYEKELGRANYALHWTC---VARPSNILLAGTP 104

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +               P  +      L +TE   G+D+  + +   +  D  + L
Sbjct: 105 EQREKYL-------------FPCIRGEKWDCLAMTEPGAGSDLRGMKATAVQDGDD-WVL 150

Query: 229 SGHKWFLSSPM-SDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRS 283
           +G K F+S    +D  I+                +     D    G   +     + +R 
Sbjct: 151 NGTKHFISHADLADFAIVFMASGEEDSPRGKRKKITAFFVDKGTKGFTVRDGYRNVSHRG 210

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                LEF +       +LG+++              L      +     +L  A+ YA 
Sbjct: 211 YTNAILEFDDCRLPGAQVLGEVHKGFDVANSWLGATRLQVGATCLGRAERALGHAVEYAA 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +     +   +AD+A ++ AA  + F     +D+     ++ A A++ A   
Sbjct: 271 QRQQFGQQIGKFQGVSFKLADMATELKAADLMVFEAGWKYDQGTVTDQDMAMAKLKA--- 327

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                +M   V  EA++  GG G +++  + R +R++    I  G+       +   L +
Sbjct: 328 ----TEMLAYVADEAIQIHGGMGLMDDLPLERIWRDARVERIWEGTSEIQRHIISRALLR 383


>gi|294942138|ref|XP_002783395.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239895850|gb|EER15191.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 424

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 127/352 (36%), Gaps = 31/352 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     +          A+ + A  +  +           S      + +  +    
Sbjct: 92  KNGLLGPFIEGYGCAGASSVAYGLIAREVERVDSAFRSAFSVQSSLVMHPINIFGSEEQK 151

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P++              K +     GLTE   G+D + + +  +K+  G       
Sbjct: 152 SRWLPEL-------------AKGTKIGCFGLTEPNHGSDPSGMETTAKKVDGGWKLHGSK 198

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D  ++ A+ +           L +    G+   ++  K   R++ T  +  
Sbjct: 199 NWITNSPIADVCVVWAKCDTDGQVRG---FLVETEWKGVSCPKILGKFSLRASPTGMILM 255

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
            + F     + ++  G V        L+SA + ++   +  AE     A  Y   R   G
Sbjct: 256 DDVFVP---EESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFG 312

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD   +I + T ++ R     DE K  S        +  + K   C 
Sbjct: 313 RPLAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHS-------NVISMCKRNNCG 365

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A+  EA + +GG+G ++E  I RH     A +   G+ +   L +   +
Sbjct: 366 KALAIAREARDMLGGNGIVDEYGIIRHVMNLEAVNTYEGTHDIHALILGRAV 417


>gi|323507642|emb|CBQ67513.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 651

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 117/567 (20%), Positives = 206/567 (36%), Gaps = 76/567 (13%)

Query: 36  AYSSDSLLV-ALIANFPSVVHK-----------ELELLGEYVLSCTAQELARMAN-YNTP 82
            +S D  L   ++  F +  H             L   G  V    A   A + +  + P
Sbjct: 17  PWSEDPALRLTILRLFSTGKHALSTSEIERLFDSLASFGNKVEGEYADIAATLDSPQHEP 76

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY- 141
            L  Y   G+R DK+     W  L      + +    + R+       +    + ARL+ 
Sbjct: 77  TLVQYDAWGQRVDKLVTGEGWKRLKGVCAEEAIVAESYPRNEAKNGGGRDKIGQHARLFA 136

Query: 142 -----LMAQLEAGHLMSPSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                + A +    L   S+T     ++ +  T +  +   P++ S +          +T
Sbjct: 137 FVRSVMFAPVSKVVLCPISMTDGAVRVLEMFGTDKQKQKAIPRLCSTD---------PRT 187

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGIYCLSGHKWFLSSPMSDAFIMLA 247
           +   G  +TE+ GG+D++   +  +         +   + +SG KWF S+   D  + LA
Sbjct: 188 AWTAGQWMTERPGGSDVSRTETVAKPLNPNKKPEAGDAFVISGFKWFSSATDGDIALALA 247

Query: 248 QVEGRV--GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +    +  G   +   L        G  NG+   RLK K+G +   T ELE     G L+
Sbjct: 248 RTSDDLTLGSKGLSLFLIKIRDDRTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGELV 307

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-SGGILIDQPVMKRA 358
           G+L      +  +  +  L SA  +V  +   L  A  YA+ R    GG L   P+    
Sbjct: 308 GELGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLDRLPLHTDQ 367

Query: 359 IADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  + +       + F    L  + +  ++   +    R++ P  K +    A       
Sbjct: 368 LLKVTVTYRVFLQIFFSNVLLMGASEAGQASKRDQTRLRLLTPALKAFVATRASESYLTL 427

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFE------Q 467
           +E  GG GY+EE  +A   R+     I  G+   + LDVL +L   KG  L E       
Sbjct: 428 IESFGGQGYMEEVGMAEMLRDGTVERIWEGTPAILSLDVLRVLVQSKGQALLEFFQDINA 487

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--------------ARFLTEKIALASS 513
           + + L   L +     +T+LR ++       G               +RFL + I     
Sbjct: 488 ILAALPTALSTQLAPELTLLRTTVRDTAAILGALDLERHLTTTDLRFSRFLLDLIMAIQG 547

Query: 514 AAALYRAGMNDIADVFLEN----RFLD 536
           +A L +     + + F  +    R   
Sbjct: 548 SALLLQHTAWKVRE-FAASAELQRLAG 573


>gi|310824678|ref|YP_003957036.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397750|gb|ADO75209.1| Acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 600

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 86/496 (17%), Positives = 172/496 (34%), Gaps = 58/496 (11%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R  +V  HP    L  + +  GL  +                  A+   + A L A   +
Sbjct: 71  RDGRVHAHPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYV 130

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++ +A ++    TP + + +  +++  E+  T             + LTE + G+ + 
Sbjct: 131 GLTIGAAHLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLG 177

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            + ++     DG Y +SG K F+S    D       + LA++EG       +  F VP  
Sbjct: 178 DVKARAFPAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSR 237

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKIL 315
             +G     N +    + +KIG R   ++ L +    +  G+L+G+ N     +  M   
Sbjct: 238 RPEGDRLVDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNE 297

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIAL 364
             +   +  V+   V+  EA+ YAR R                 +I+   ++R +     
Sbjct: 298 ARIMVGLNGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKA 357

Query: 365 DIA------AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +       AAT++   LA    + ++R        ++ P+ K +  +        A++ 
Sbjct: 358 IVEGGLSLLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQV 417

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL 476
            GG GY  E       R+   NSI  G+     LD+L   ++  G    +     +   +
Sbjct: 418 HGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAAGGAALQAFSEEVLATV 477

Query: 477 GSSGKKVITILR-DSISLCKEDKGLARFLTEKIALASSAAALYRAGMN--------DIAD 527
             + +  +      ++    E           + +A     + R   +         +A 
Sbjct: 478 ARARQAGVHGPWCAAMEASLEAVLELTMSLGAMGMAGEVEQMLRHSADYMELFSILAVAW 537

Query: 528 VFLENRFLDNCHSTHC 543
            +L             
Sbjct: 538 RWLAQAAAAREGLAKG 553


>gi|86738776|ref|YP_479176.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3]
 gi|86565638|gb|ABD09447.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3]
          Length = 614

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 90/519 (17%), Positives = 192/519 (36%), Gaps = 65/519 (12%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
              +   +E+    +++ S    E    A+ + P L      G     V    ++    +
Sbjct: 32  EMDAETAREVLAELDHLASGPVAESFTDADRHPPTLDP--ATG----SVTLPESFKKSYQ 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
             +               +         A+ L L A       M+    +A +  L    
Sbjct: 86  AVLDGEWWRLYLPPHLGGLGASPTVAWAASELLLGANPAIFMYMAGPTFAAILHRL---- 141

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                        E+         +      + LTE   G+D+ A  ++  +  DG + +
Sbjct: 142 -----------GNEWQRQLAEFAIERHWGATMVLTEPDAGSDVGAGRTRAIEQPDGTWHI 190

Query: 229 SGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLC 271
            G K F+++   D       ++LA+ EG       +  F+VP+ + D      G+ NG+ 
Sbjct: 191 EGVKRFITNGDWDVPENIIHLVLARPEGHGPGSKGLSMFVVPKFMPDPRTGTPGARNGVY 250

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              ++ K+G + +AT EL F       G+L+GD++     +  +     +     +++ +
Sbjct: 251 VTNIEKKMGLKVSATCELRFGERAPAVGWLVGDVHEGIAQMFQVIEYARMMVGSKAIATL 310

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
                 A+ +AR R                  +I  P ++R +    +      +L    
Sbjct: 311 STGYLNALEFARTRVQGADLARASDKTAPRVTIIHHPDVRRMLMMQKVYAEGMRSLVLYT 370

Query: 377 ANSFDE---AKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A   D    A  R E    A      + PI K    + +  ++A +++ +GGSGY+++  
Sbjct: 371 ATFQDRVALAGERGEADELAERINDLLLPIVKGVGSERSYELLASSLQILGGSGYLQDYP 430

Query: 430 IARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITI 486
           I ++ R++  +++  G+ +     L    ++         +   ++  + G +G   +  
Sbjct: 431 IEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDQGQALASVLGEIQTFVKGEAGNGALRA 490

Query: 487 LRDSISLCKED-KGLARFLTEKI-ALASSAAALYRAGMN 523
            R+++ +  ED + +   L   +   A  AAA+Y+ G+N
Sbjct: 491 EREALGVALEDVQSMVNSLVGFLTGAAEEAAAIYKVGLN 529


>gi|32141216|ref|NP_733617.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256786699|ref|ZP_05525130.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289770594|ref|ZP_06529972.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|24427171|emb|CAD55332.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289700793|gb|EFD68222.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 608

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/550 (16%), Positives = 184/550 (33%), Gaps = 79/550 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              V +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSVLEELTRLSE----NELAESFADADRNPPV---FDP---ETNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWAYAELILGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E      +   +      + LTE   G+D+ A  ++  + +DG + + G
Sbjct: 142 ---------GNEVQKHIASIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQADGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQ 273
            K F++S   D        +LA+ EG   G   +   L             G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYEFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKAAPKVTITHHPDVRRSLMTQKAYAEGMRALVMYTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +  S E A   ++ P+ K +  + A   +A++++  GGSG+++E  I 
Sbjct: 373 VQDEIQVKEANGEDASAEHALNDLLLPVVKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R++  +++  G+      D     ++         L   +++   L + G+++    
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGTALNSLAEDIKKFLALATGGEELSGAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   +   +A        +Y+ G+N         R L         + 
Sbjct: 493 EHLAKAAVELEAIVGLMLTDLAATEQDVKNIYKVGLNT-------TRLLQASGDVIVGYL 545

Query: 544 MLHGRFNAAH 553
           +L G   AA 
Sbjct: 546 LLKGAAIAAE 555


>gi|254500634|ref|ZP_05112785.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436705|gb|EEE43384.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 392

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 136/371 (36%), Gaps = 24/371 (6%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
               ++ +  P    ++ R    GL       +           +          +    
Sbjct: 33  AREVEEKDEAPG-PDVMHRFAELGLLGVNLPEAHGGGGMSHFEAVLVLEEVAKVSIGVAF 91

Query: 151 LMSPSVTS-ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +  S    A  +A      + +   PK+ S +               + + ++E   G+
Sbjct: 92  PIFESCFGPALAIANFAPEAMRQKILPKVCSGDM-------------IVAVSMSEPGAGS 138

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            +  +T++ +   D +      +W   +  SDA+++  ++    G   +  +L +   +G
Sbjct: 139 ALTDLTTKARVEGDRVIVNGQKRWCSGAGHSDAYVVYCRMSDDPGAKGIGAVLVEKGADG 198

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSG 327
             + + ++ +G R   + ++ F +        +  + G  + M+   L    +  MS++ 
Sbjct: 199 FTFGKREHHMGFRGVHSADMYFDDVSVPAKNIIVPAGGFRKLMEAFDLERCGNTTMSLAC 258

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +    + Y + R   G  +ID   ++  IAD+ + + AA  L +R     +      
Sbjct: 259 AQSAFDYVLSYVQEREQFGKPIIDFQAVQLQIADMKMKLDAARLLLYRAVVKAESGLPSV 318

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E+        I K +  +M   V  +AM+ +GG GY  E  + +  R+S    I  GS 
Sbjct: 319 GES-------SIAKCFANEMTREVTGKAMQLMGGYGYSREYPMEQKMRDSWGWGIAGGSI 371

Query: 448 NAMVLDVLNLL 458
           +    ++ + L
Sbjct: 372 DIQKTNIASAL 382


>gi|126665860|ref|ZP_01736841.1| acyl-CoA dehydrogenase, putative [Marinobacter sp. ELB17]
 gi|126629794|gb|EBA00411.1| acyl-CoA dehydrogenase, putative [Marinobacter sp. ELB17]
          Length = 386

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 33/366 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           + ++++  G++      S   +     H  +A     +A++     +  +  S  ++   
Sbjct: 45  IKQKALEAGIYAFNMPESVGGLGID--HVSQALIERELAKVSWALQVYVARPSNILMVCR 102

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                  D+               P  +        LTE   G+D A IT++ +K  D  
Sbjct: 103 --DEQINDYL-------------MPCVRGEKTDCFALTEPGAGSDAAGITTRARKDGDSF 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIG 280
                  +   +  +D  I+ A   G       PR      L D    G   +R    + 
Sbjct: 148 VINGSKHFISHAGEADFAIVFAVT-GTDSSSGRPRNQVTSFLVDKGTPGFTVRRGPICVS 206

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           NR     E+ F +       +LG++               +  A   V   + +   A  
Sbjct: 207 NRGYHQYEIFFDDCRVHESKVLGEVGKGWDVANSWLTAGRVMVAAHCVGQAQRAQVLATQ 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A  R   G  +     +   +AD+  +I AA  ++   A   DE      +A  A    
Sbjct: 267 WAADRKQFGKAIGANQGVSFKLADMVTEIRAAELMTLHAAWKMDEGTMTDGDAGMA---- 322

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +M   V  EA++  GG G + E  + R +R +    I  G+       +   
Sbjct: 323 ---KLYASEMLGRVTDEAVQIYGGMGLMNETVVERLWRNARIERIWEGTSEIQRHIISKE 379

Query: 458 LEKGTN 463
           L +   
Sbjct: 380 LMRAQA 385


>gi|120401264|ref|YP_951093.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954082|gb|ABM11087.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 611

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/539 (18%), Positives = 192/539 (35%), Gaps = 87/539 (16%)

Query: 34  MNAYSSDSLLVALIANF------PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
            N +     L  ++A           V + L    +      A+  A   + N P   ++
Sbjct: 13  FNLFEV-LALEKVLATGEFGDLDGPSVREMLHEAAKLAEGPLAEAYAET-DRNPP---SF 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P       V     +    R  +               V      +     L L AQ  
Sbjct: 68  DPATHV---VSIPEPFKKSFRAWLDGEWFRVGMAEEIGGVPAPAMLEWAINELALGAQPA 124

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     A ++  +      + WA  +  R +  T             + LTE   
Sbjct: 125 AFMYAAGPKM-ADIINAIGNEEQ-RHWAALMIERNWGAT-------------MVLTEPDA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGC 255
           G+D+ A  ++  + +DG + + G K F+++  +D        ++LA+ EG       +  
Sbjct: 170 GSDVGAGRTKAVQQADGTWHIDGVKRFITNGDADDLFENILHVVLARPEGAGPGTKGLSL 229

Query: 256 FLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVS 305
           FLVP+        E G  NG+    L++K+G +++AT EL F        G+L+ D +  
Sbjct: 230 FLVPKFHFDPQTGEPGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLVNDTHNG 289

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQP 353
              +  +     +     ++S +      A+ YA+ R                  +I  P
Sbjct: 290 IAQMFKVIEYARMMVGTKAMSTLSTGYLNALEYAKTRVQGADMTQMTDKSAPRVTIIHHP 349

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARI----MAPITKYWCCK 406
            ++RA+           AL    A   D A +      +AA A      + PI K    +
Sbjct: 350 DVRRALLIQKAYAEGLRALYLYTAAHQDPAAADIVSGADAAMADRVNDLLLPIVKGVGSE 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A   + E+++  GGSG++++  I ++ R++  +S+  G+      D             
Sbjct: 410 RAYQCLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDF------------ 457

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
             F  + +D G +   V++ LR  +      + LA   TE+ AL  +A    +  +  +
Sbjct: 458 -FFRKIARDQGGALLHVVSQLRRFLDDLSAREELA---TER-ALLGTAVDDVQEMVAAM 511


>gi|297160332|gb|ADI10044.1| acyl-CoA dehydrogenase domain protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 385

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 139/380 (36%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E W +    P      ++    G+        +     + + K  A      A+   
Sbjct: 27  PYYEEWREAGQAP--REFYKKLGELGIFGIEVPEEYGG-AGETSFKFNAIITEETARAGV 83

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               S   T+  +  L    T    + W P             P     +   + +TE  
Sbjct: 84  SFGGSGVHTALCLPYLLKYATEEQKRRWLP-------------PFIAGDMMTAIAMTEPG 130

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRL 261
            G+D+A + +  +   DG  Y L+G K F++  + +D  ++ A+            +  L
Sbjct: 131 TGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDRRGGISIL 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + D    G    R   K+G +++ T EL F++       LLG+   +   +        L
Sbjct: 191 VVDTRSEGYAVGRKLEKLGLKTSDTAELSFTDVKVPVADLLGEEGRAFEYLTHNLPQERL 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A+ + +    ++  A  Y   R + G  +      K A+AD   ++ A  A+  R   
Sbjct: 251 GIAVSAYAQAAAAVEFAKAYVADRTIFGKTVASFQNTKFALADCKSEVDAMQAVVDRALE 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           + D  +  + +AA A       K +  + A  VI + ++  GG GY+ E  IAR Y ++ 
Sbjct: 311 AHDAGELTAADAASA-------KLFTTERAAVVIDKCLQLHGGYGYMMEYPIARLYADTR 363

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   M   V   +
Sbjct: 364 VTRIYGGTSEVMRSIVAKSM 383


>gi|294911653|ref|XP_002778031.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239886152|gb|EER09826.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 424

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 127/352 (36%), Gaps = 31/352 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     +          A+ + A  +  +           S      + +  +    
Sbjct: 92  KNGLLGPFIEGYGCAGASSVAYGLIAREVERVDSAFRSAFSVQSSLVMHPINIFGSEEQK 151

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P++              K +     GLTE   G+D + + +  +K+  G       
Sbjct: 152 SRWLPEL-------------AKGTKIGCFGLTEPNHGSDPSGMETTAKKVDGGWKLHGSK 198

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D  ++ A+ +           L +    G+   ++  K   R++ T  +  
Sbjct: 199 NWITNSPIADVCVVWAKCDTDGQVRG---FLVETEWKGVSCPKILGKFSLRASPTGMILM 255

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
            + F     + ++  G V        L+SA + ++   +  AE     A  Y   R   G
Sbjct: 256 DDVFVP---EESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFG 312

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD   +I + T ++ R     DE K  S        +  + K   C 
Sbjct: 313 RPLAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHS-------NVISMCKRNNCG 365

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A+  EA + +GG+G ++E  I RH     A +   G+ +   L +   +
Sbjct: 366 KALAIAREARDMLGGNGIVDEYGIIRHVMNLEAVNTYEGTHDIHALILGRAV 417


>gi|10639438|emb|CAC11440.1| acyl-CoA dehydrogenase (SHORT-CHAIN SPECIFIC) related protein
           [Thermoplasma acidophilum]
          Length = 397

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 29/305 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++AL       K +  K+FS                 +GL +TE  GG+D+A I +   K
Sbjct: 115 VIALFGNDDQKKKYLSKVFSG-------------QAKMGLAVTEPGGGSDVANIKTTAVK 161

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  Y L+G K F+++   +D F++LA+    +     +   + + + +G    ++  K
Sbjct: 162 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNFDGFKSNKIHGK 220

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-H 337
           +G R+  T EL   N        +           I+ + D +   V+   + +AE I  
Sbjct: 221 LGVRATDTAELTLENVKVPAENLVGEPGRGFYY--IMTFFDISRAYVAAQALGIAEGILE 278

Query: 338 YARRRHVSGGILIDQP-VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            A       G +  QP  ++ AIAD+A  I AA  L++  A+                 +
Sbjct: 279 RAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASFIFNFNPNPA-------V 331

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K +  + A  V  +AME  G  G      I R +R++    I  G+     L +  
Sbjct: 332 TSMAKAYAAETAVYVSRKAMEITGIDGLSSN--IERSFRDAKIMEIWEGTSEIEKLVIAR 389

Query: 457 LLEKG 461
           +L+ G
Sbjct: 390 MLKVG 394


>gi|330826857|ref|YP_004390160.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329312229|gb|AEB86644.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 597

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/472 (17%), Positives = 164/472 (34%), Gaps = 56/472 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              R     G   + WD     +   +     A   +  A +        S+ +A+++  
Sbjct: 77  EAWRAFAEAGFLSAHWDAEEGGIQLPEPVFRAAMAHFFTANVATMGYPFLSIGAANLLRT 136

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + + P + S     T             + LTE   G+ +  I +  +   DG
Sbjct: 137 FGSEELKRLYLPLMASGICAGT-------------MALTEPGQGSALGDIKTVAEPADDG 183

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPN 268
            Y +SGHK F+S    D       ++LA+++G       +  FLVP+ +       G  N
Sbjct: 184 SYRISGHKMFISGGDQDFSDNIVHMVLARIKGAPAGVKGISLFLVPKFIPRADASRGERN 243

Query: 269 GLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    L +K+G R+  +  L F       G+LLG+ N     +  +     +   +++ 
Sbjct: 244 DVALAGLLHKMGWRNTTSTVLSFGEKGGATGWLLGEPNRGLAHMFQLMNEARIGVGLIAA 303

Query: 326 SGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSF 374
                   E++ YAR R                 +I+   +KR +         A AL  
Sbjct: 304 CLAYRGFTESLAYARERPQGRLPSCKNPLSPQVRIIEHADVKRLLLTQKAYAEGALALCL 363

Query: 375 RLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           + +  F++  S  +            ++ P+ K W  +        A++ +GGSGY  E 
Sbjct: 364 QASAWFEDQHSHPDQTRRELAGHLLDLLTPVVKSWPSRYGCRSNDMAIQVLGGSGYTREY 423

Query: 429 SIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            + + YR+   N I  G+     LD+L   + +          + + Q+  ++   +  +
Sbjct: 424 PVEQLYRDQRLNPIHEGTEAIHGLDLLSRKVRQADGVGLRAFLNLMRQESDAAEAPLQVL 483

Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
            +         + +   L    A +S            + D F   R     
Sbjct: 484 AQALRQGADGLEAVTAKLV--AAQSSQPDLALAHATEYL-DAF--GRVTQGW 530


>gi|84500380|ref|ZP_00998629.1| glutaryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84391333|gb|EAQ03665.1| glutaryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 408

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 129/389 (33%), Gaps = 41/389 (10%)

Query: 88  GPGGERWD----KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
                R +    +    P   A +      G+        +  +          AR    
Sbjct: 49  DRLAGRVEKMYMEEGVDPEIFAEMG---EAGMLGVTVPEQYGGLGSGYVSYGLVAREVER 105

Query: 144 AQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  + S  S      +    +    K + PK+ S E+                 GL
Sbjct: 106 IDSGFRSMCSVQSSLVMYPIYAYGSEEQRKKYLPKLASGEW-------------IGCFGL 152

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D A + ++ +K   G        W  ++P++D F++ A+ +   G   +   +
Sbjct: 153 TEPDAGSDPAGMKTRARKTEGGYVLNGAKMWISNAPIADVFVVWAKSDAHDGA--IRGFV 210

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSA 321
            D    GL   ++  K+  R++ T E+   +               V  +K     L+ A
Sbjct: 211 LDKGMKGLSAPKIGGKLSLRASITGEIVLDDVEV----GEEALLPHVSGLKGPFGCLNRA 266

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              ++   +  AE     A  Y   R      L    + ++ +AD+  +I      + R+
Sbjct: 267 RYGIAWGVMGAAEDCWFQARQYGLDRKQFNKPLAGTQLYQKKLADMQTEITLGLQAALRV 326

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FDEA++       A  M  + K   C  A  +   A +  GG+G   E  + RH   
Sbjct: 327 GRLFDEARA-------APEMVSLIKRNNCGKALDIARTARDMHGGNGIQIEYKVMRHAAN 379

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLF 465
               +   G+ +   L +L   + G   F
Sbjct: 380 LETVNTYEGTHDVHAL-ILGRAQTGLQAF 407


>gi|89055560|ref|YP_511011.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88865109|gb|ABD55986.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 404

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/404 (17%), Positives = 134/404 (33%), Gaps = 36/404 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             + + R A     Q        E +DK    PA    +      GL  +    S+  + 
Sbjct: 30  EDERMIRDAARAYAQDRLQPRVIEAYDKERTDPAIFTEMG---EMGLLGTTIPESYGGLG 86

Query: 129 RKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               A+ + A  +  +       +   S      +    +    + + PK+ + E+    
Sbjct: 87  GSYVAYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRQKYLPKLATGEW---- 142

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                        GLTE   G+D + + +  +K + G        W  +SP++D FI+ A
Sbjct: 143 ---------IGCFGLTEPDAGSDPSGMKTVARKTAAGYVLNGAKMWISNSPIADVFIIWA 193

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           + E   G   +   + +    GL   ++ +K+  R++ T E+   N              
Sbjct: 194 KSEAHGGK--IRGFVLEKDMPGLSAPKIGDKLSLRASVTGEIVMENVAV----GEEALLP 247

Query: 308 PVEDMKI-LIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
            VE +K     L+ A        +      +A A  Y   R      L    + ++ +AD
Sbjct: 248 NVEGLKGPFGCLNRARYGISWGVIGAAEFCMAAARQYGLDRTQFDRPLAQTQLYQKKLAD 307

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +I      S ++    D+  +       A  M  + K   C  A      A +  GG
Sbjct: 308 MLTEITLGLQASLQVGRLMDDGNA-------APEMISLIKRNNCGKALDAARLARDMHGG 360

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +G   E  + RH       +   G+ +   L +   +      F
Sbjct: 361 NGISSEFQVFRHMSNLETVNTYEGTHDIHALILGRAITGHQAFF 404


>gi|332975299|gb|EGK12198.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)]
          Length = 601

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/466 (15%), Positives = 160/466 (34%), Gaps = 59/466 (12%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G     ++     +   +      +  ++ A          +  + +++       +
Sbjct: 87  RESGFIAGRYNFEEGGMQLPETVMTALSGYFMAANPATTAYPFLTSAAINVLTHFADDTI 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P++ + E+  T             + LTE   G+ +A I +   K  DG Y + G
Sbjct: 147 KQAFIPRMLTGEFTGT-------------MALTEPHAGSSLADIRTTAIKQEDGTYRIRG 193

Query: 231 HKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLEDG----------SPNGLCYQR 274
            K ++S    +       ++LA+V G   G   +   +               N +    
Sbjct: 194 SKIYISGGDHELSDNIVHLVLAKVPGGPAGVKGISLFVVPKYRLDEQGQVVERNDVHLAG 253

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L +K+G R   +  L F +     G+L+G+ +     +  M     +     +       
Sbjct: 254 LIHKLGYRGTTSTALSFGDKNECVGYLIGEEHFGLRYMFKMMNEARIAVGFGAAMIGYRG 313

Query: 332 LAEAIHYARRRHVSG-----------GILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++ YA+ R                 +I+   +KR +           +L    +N  
Sbjct: 314 YQYSLAYAKDRLQGRVAPHLSPEDDAAPIIEHGDVKRMLLAQKAYGEGGISLCLYGSNLI 373

Query: 381 DEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           D   +  +E      A    ++ P+ K W  +  P      ++ +GG+GY  E    + +
Sbjct: 374 DRINTCDDETQKQELAELLDLLTPVLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFW 433

Query: 435 RESPANSILLGSGNAMVLDV--LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R++  N I  G+     LD+    L +K     + L   + +DL +        L   ++
Sbjct: 434 RDNRLNPIHEGTNGIQALDLTFRKLWQKQGLGLKVLQQEITRDLTAITNPQTAKLAKKLT 493

Query: 493 LCKED-----KGLARFLTEKIALASSA---AALYRAGMNDIADVFL 530
           +  E      + + + LT   A+  +A   A +       I+ +++
Sbjct: 494 VYIEQLQPLLQHVGQTLTTPQAVTLTANAQALMNVFATMVISWIWI 539


>gi|170732670|ref|YP_001764617.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169815912|gb|ACA90495.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 609

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/576 (18%), Positives = 198/576 (34%), Gaps = 99/576 (17%)

Query: 37  YSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           +     LVAL   +     +  + +    E +        A   +   P+       GER
Sbjct: 17  WLDAEALVALPR-YAEHSRETFDAVLDTSERIAEDLFAPHAARGDREEPRF-----DGER 70

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
              +   P     +R     GL  +  D +   +   +  +  +   +  A +       
Sbjct: 71  VTLI---PEVEPAVRAFADAGLIAAGHDEALGGMRLPKLVEAASFLFFQAANIATAAYPF 127

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +V +A+++    +      +A              P  +      + L+E + G+ ++ 
Sbjct: 128 LTVANANLLVAHGSAAQIDAFA-------------RPELEGRFLGTMCLSEPQAGSSLSD 174

Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG---------- 254
           I ++     D      Y L+G+K ++S    +       ++LA++    G          
Sbjct: 175 IATRADFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDEHGRLLPGTRGIS 234

Query: 255 CFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEFS-----------NTFGF 297
            F+VP+ L   DG  NG    +    L +K+G R      L F               G+
Sbjct: 235 LFIVPKFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRYRPEGRAGAIGY 294

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------ 345
           L+G  N     +  M     +     +V+        A+ YAR R               
Sbjct: 295 LVGRPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKDAAA 354

Query: 346 -GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAP 398
               ++D P ++R +      +    AL+   A   DEA++  + A  A       I+ P
Sbjct: 355 PQAPIVDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHDDAAVRAEATRLLDILTP 414

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K W  +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L   
Sbjct: 415 IAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLG-- 472

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE------------ 506
            K T         L+  +G++ ++   +       C++   LAR                
Sbjct: 473 RKVTQDDGASLRALDARIGATVERARAL---DAGACEQADALARRWARLCDVTHQLSAIG 529

Query: 507 --KIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             +  LA+++  L   G   +A ++L+     + H 
Sbjct: 530 DPQTRLANASVYLEAFGHLVVAWLWLDVTLAAHGHD 565


>gi|84495592|ref|ZP_00994711.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84385085|gb|EAQ00965.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 391

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 141/357 (39%), Gaps = 20/357 (5%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
           +   GL    +  S           I  A L   A +E+G   S  + +A     + TP 
Sbjct: 45  AARVGLLGIGFPESVGGQGG----SIVDANLVTEAIIESGG--SGGLIAALFTHGIATPH 98

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
           +       +      PT         +   L +TE  GG+D+A I +  ++  D  + ++
Sbjct: 99  IVSSGDAHLIDTYVRPTL-----DGQLIGSLAVTEPSGGSDVAGILTTARRDGDD-WIVN 152

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           G K F++S +   F+  A   G  G   +  L+ D    GL   R   K+G   + T EL
Sbjct: 153 GAKTFITSGVRADFLTTAVRTGDPGHGGISLLVIDKDSPGLTVSRPLRKLGWHCSDTAEL 212

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +       ++G ++     + +  +   L+ A  + +    + A A+ YA  RH  G
Sbjct: 213 SFDDVRVPGHHIVGQVHSGFALIMEQFVSERLNLATQAHATASRATALAVAYAGTRHTFG 272

Query: 347 GILIDQPVMKRAIADI-----ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
             L  + V++  + D+     A       A+++    +       +E+   A + A   K
Sbjct: 273 RSLSQRQVIRHLLVDMARRTAAARALTRQAITYAAELAESSDAPDAEQRRKATLEAVFAK 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  V+++A++  GG GY+ E  + RHYR+     I  G+   +      L+
Sbjct: 333 NTAVEAAERVVSDAVQIFGGMGYMRESEVERHYRDVRILGIGGGATEVLNDLAAKLM 389


>gi|239932669|ref|ZP_04689622.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291441027|ref|ZP_06580417.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343922|gb|EFE70878.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 408

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 134/393 (34%), Gaps = 42/393 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   G++   +              +    L+       
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDATGLGIPMTMEELF-WGDAGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +  +  +A  V    T      W P+++   +D                  +E   G
Sbjct: 86  ALSIVGTGLAAVGVLANGTEEQIGTWIPQMYGDAHD----------VKVAAFCSSEPDAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+A++ ++       D         W  +  +++  +++A V+  +G       +    
Sbjct: 136 SDVASLRTRAVYDEAKDEWVINGTKTWATNGGIANVHVVVAVVDPDLGSKGHASFIVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVEDM 312
             GL   +   K G R++ T E+   +        L                +    E +
Sbjct: 196 TPGLSQGQKFKKHGIRASHTAEVVLEDVRVPGSCLLGGKEKLDERLARAREKAKKGGERV 255

Query: 313 KILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
           K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+   
Sbjct: 256 KNAAMATFEASRPAVGAMAVGTARAAYEVALEYAQTREQFGRPIIDNQGVAFQLADMRTR 315

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY 
Sbjct: 316 IDAARLLVWRASWMAVNGKPFTAA------EGSMSKLFASETAKEVTAQAIQILGGNGYT 369

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  + R +R++   +I  G+     L +   L
Sbjct: 370 REYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|254474145|ref|ZP_05087537.1| acyl-CoA dehydrogenase  6 [Pseudovibrio sp. JE062]
 gi|211956841|gb|EEA92049.1| acyl-CoA dehydrogenase 6 [Pseudovibrio sp. JE062]
          Length = 395

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 131/374 (35%), Gaps = 22/374 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             P    W++    PA H L ++    G         +  +    +++       +  + 
Sbjct: 22  INPHVPEWEEAGIFPA-HELFKKMGTLGFLGVNKPEEYGGMGLDYSYQA------MTIEA 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +  +   M TP +      +  S E      AP     +   +G++E  
Sbjct: 75  LGACACGGVPMAIGVQTDMATPAL-----SRFGSDELRREFLAPAIAGDMVACVGVSEAH 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A I +  +K  D         W  +S  +D   MLA             ++    
Sbjct: 130 AGSDVANIKTTARKDGDDYVITGSKMWITNSTQADYMCMLANTSDGHKHQNKSLIIVPMD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G+      NK+G RS+ T ++ F +        +     G +  M       L  A+ 
Sbjct: 190 SAGITKSDRLNKLGQRSSDTAQIFFDDVRVPQRNLIGDEGAGFMYQMMQFQEERLWCALS 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M   +     Y R R      ++D  V+   ++++  ++    ALS +   S    
Sbjct: 250 LIDSMDRIIQLTEDYCRERAAFNQSILDFQVVHFRLSELRTEVELLRALSEKCVESMVRG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           ++ +        +A + K    +++  +    ++  GG GY+ +  +++  R+S   SI 
Sbjct: 310 ENVTR-------LASMAKLKAGRLSRELADSCLQFWGGMGYMWDSPVSQFLRDSRLTSIG 362

Query: 444 LGSGNAMVLDVLNL 457
            G+   M+  +  L
Sbjct: 363 GGADEVMLSIISKL 376


>gi|295837705|ref|ZP_06824638.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197695923|gb|EDY42856.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 608

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 92/526 (17%), Positives = 187/526 (35%), Gaps = 69/526 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
               + A+    +  EL  L E        E    A+ N P    + P      +    P
Sbjct: 29  PFAEMDADTARSILAELARLSE----NELAESFTDADRNPPV---FDP------ETNTAP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
                 ++S    +    W       +        A R  + A  E     +P+V     
Sbjct: 76  V-PETFKKSYQSFMDSEYWRLGLPEEIG----GTTAPRSLIWAYAELILGANPAVWM--- 127

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
               + P        +    E          +      + LTE   G+D+ A  ++  + 
Sbjct: 128 --YSSGPAFAGILFDE--GNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAVEQ 183

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVPRLLED------ 264
           +DG + + G K F++S   D        +LA+ EG          FLVP+   D      
Sbjct: 184 ADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKFEFDWETGEL 243

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  NG+    +++K+G +++ T E+ F +     G+L+GD +     +  +     +   
Sbjct: 244 GERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVG 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAA 369
             +++ +      A+ YA+ R                  +   P ++R++          
Sbjct: 304 TKAIATLSTGYLNALEYAKERVQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGM 363

Query: 370 TALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            AL    A   D         +  +E  A   ++ PI K +  + +   +A++++  GGS
Sbjct: 364 RALVMHTAAVQDSIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGS 423

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GS 478
           GY++E  + ++ R++  +++  G+      D     ++         +   +++ L  G 
Sbjct: 424 GYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSVAEDIKKFLAVGP 483

Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMN 523
            G+ +     +      E + L    LT+  A   +A  +Y+ G+N
Sbjct: 484 GGETLAAARGELAEAAGELEALVGAMLTQLAATQENAREIYKVGLN 529


>gi|298244192|ref|ZP_06967998.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551673|gb|EFH85538.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 388

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 113/362 (31%), Gaps = 34/362 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +                 ++ +L    +      SA  + 
Sbjct: 48  RQLQLKAKELGFWGINTPEEYGGANLGPVMTA-----IIIMELSHTFVPFAFGGSADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +               P           LTE   G+D A I     K   
Sbjct: 103 YHCNEEQKQRYLI-------------PTINGERRSCFALTEPGAGSDAANIKMSAVKDGK 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             + L+G K F+++   +D  ++ A  +   G   V   L D            + +G  
Sbjct: 150 H-WVLNGEKVFITNGNEADFTMVFAVTDKERGARGVTCFLVDREMG--WRSNYIHTMGEW 206

Query: 283 SNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             A+  L F N        LG+LN               + A  +V      L   I YA
Sbjct: 207 GPAS--LYFENVRVPEENILGELNQGFTLGMQWIGAGRWNIAARAVGAAERLLQMGIDYA 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + ++  ++  IAD  ++I A   L+   A   +E +     +        I
Sbjct: 265 KTRSTFGKPIAERQAIQWMIADSRVEIEATRWLALHAAWMAEEGQDTRHAS-------SI 317

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +   MA  V    M+  GG GY +E  I R YRE     I  G+       +   L 
Sbjct: 318 AKLYGSNMANQVADRVMQIHGGMGYTKELPIERWYREMRVWRIFEGTDEIQRFIISRDLL 377

Query: 460 KG 461
           +G
Sbjct: 378 RG 379


>gi|297189978|ref|ZP_06907376.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718635|gb|EDY62543.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 385

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 143/377 (37%), Gaps = 33/377 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             W++    P    L  +    G+        F       ++K  A     +A+      
Sbjct: 30  HEWEQAGLVP--RELYYKLGDLGVFGIEVPEQFGGAGLD-SYKYEAVIQEELARAAVTFG 86

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            S   T   +  L    T    + W P   S                   + +TE   G+
Sbjct: 87  ASGIHTGLCLGYLKRYATEDQMRRWMPGFLSG-------------DTMYAIAMTEPGAGS 133

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF---LVPRLLED 264
           D+A I +  +   DG  + L+G K F++  + +D  +++ +            +  L+ D
Sbjct: 134 DLAGIKTSARLSEDGTHWILNGAKTFITGGVHADRVLVVCRTSPAPAENRRLGLSLLVVD 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G    R   KIG R++ T EL FS+       LLG+   +   + +  ++  L   
Sbjct: 194 AHAEGFAVGRKLEKIGLRTSDTAELSFSDVKVPVEDLLGEEGNAFSYLSENLVVERLFIG 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I + +  R ++  A+ Y R+R V G  +      K  +A+ A ++ AA  ++ R     D
Sbjct: 254 ISATASARAAIDFALEYTRQREVFGKSVASFQNTKFVLAECAAEVEAAQVMTDRALELHD 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                + +AA         K +  ++A  VI + ++  GG GYI E  IAR Y ++  + 
Sbjct: 314 VGALTAADAARL-------KLFTTEVAGRVIDKCLQLHGGYGYILEYPIARLYADTRVSR 366

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+   M   +   L
Sbjct: 367 IYAGTNEVMKSVIAKDL 383


>gi|260063229|ref|YP_003196309.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
 gi|88783323|gb|EAR14495.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501]
          Length = 603

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 134/374 (35%), Gaps = 33/374 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
             +R++   G         +  +       +        A               ++ + 
Sbjct: 68  QCMRKAGELGFLSIAVPEEYGGMGMGFVSTMLVCDYISGATGSYSTAFGAHTGIGTLPIT 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    K + PK+ S E+                  LTE   G+D  +  ++     D
Sbjct: 128 LYGTEEQKKKYVPKLASGEWFG-------------AYCLTEPGAGSDANSGKTKAVLSED 174

Query: 224 GI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y +SG K ++S+    + FI+ A++E     ++   ++E+   NG+     + K+G 
Sbjct: 175 GKHYLISGQKMWISNAGFCNLFIVFARIEDDK--YITGFIVENDPENGISLGDEEKKLGI 232

Query: 282 RSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            S++T ++ F+ T   +   L     G    M  L    +  A   +   R    EA+ Y
Sbjct: 233 HSSSTRQVFFNETKVPVENMLSERGNGFKIAMNALNVGRIKLAAACLEAQRRVTDEAVRY 292

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------AKSRSEEAA 391
           A  R      +I+   +K  IA +A +     A  +R A + ++       A +   EA 
Sbjct: 293 AGERKQFKTAIINFGAIKSKIATMATNAYVGEAACYRAAKNIEDRIALRVAAGNSHAEAE 352

Query: 392 Y-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                   I   I K    +       E ++  GG G+  +  +   +R++  + I  G+
Sbjct: 353 LKGVEEYAIECSILKVAVSEDVQETTDEGIQIFGGMGFSADTPMESAWRDARISRIYEGT 412

Query: 447 GNAMVLDVLNLLEK 460
                +  + +L K
Sbjct: 413 NEINRMLAVGMLVK 426


>gi|116694353|ref|YP_728564.1| medium-chain acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113528852|emb|CAJ95199.1| Medium-chain acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 387

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 114/353 (32%), Gaps = 30/353 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-----HLMSPSVTSASMVALMTTP 168
           GL    +   + P               +M +          +++     A ++    T 
Sbjct: 50  GLADFGYFGGYMPESEGGLGLDYLTWAVMMEEAGYCWQSLRAIINSMNIVAGIIQAYGTE 109

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +               P+ +      + ++E   G+++A I ++  K  D     
Sbjct: 110 AQKERFL-------------WPLLRNERKSYVSISEPDVGSNVAEIKTRADKRGDTYVLN 156

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  +   +D  I++A+         +   L +          ++     R+  T  
Sbjct: 157 GSKLWITNGMFADFGIVVARTYSDTCNGDLSMFLVERDATPYTATPVEMMFA-RTTGTAA 215

Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
             F N       LLG                 L+ A+ +V   + +L  A  YA +R   
Sbjct: 216 FTFENAEIPAANLLGKEGQGLRQTLIGLNFGRLNVAMGAVGAAQYALDLATDYATQRKQF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    ++++ I D+   + AA AL +R A +     +RSE          I K +  
Sbjct: 276 GRPIGSFQLVQKHIVDMTTRVQAARALGYRAARALQSGNARSE--------CSIAKLYAT 327

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             A  V   A++  G  G      + R +R++    I  G+     L +   +
Sbjct: 328 DNAYEVSHLALQVHGAMGCAVGYPVERLFRDARGGLIPEGTTEIQTLIIGREI 380


>gi|148253939|ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146406112|gb|ABQ34618.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 404

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 126/371 (33%), Gaps = 37/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL        +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D A + ++ +K++
Sbjct: 122 YAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDPAGMKTRAEKVA 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 227 ASITGEVVMDGVVVPEEALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCMHR 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +IA     S R+    DE K        A 
Sbjct: 281 ARQYTLDRKQFGKPLAATQLVQKKLADMETEIALGLQASLRVGRLMDEGK-------MAP 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +
Sbjct: 334 EMISIVKRNNCGKALDIARVARDMHGGNGIQIEYQVMRHAANLETVNTYEGTHDVHALIL 393

Query: 455 LNLLEKGTNLF 465
              +      F
Sbjct: 394 GRAITGIQAFF 404


>gi|332667946|ref|YP_004450734.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336760|gb|AEE53861.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
          Length = 598

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/434 (18%), Positives = 156/434 (35%), Gaps = 34/434 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL +    GL  +     +  +                A        +        +  
Sbjct: 67  RLLEKMAALGLLGTHMPEVYGGMQLDTNTNTLIGDALGPAGAFTVSYAAHIGIGMLPILY 126

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + P++ + E             +     LTE   G+D  A  ++    +DG
Sbjct: 127 FGTEEQKDKYLPRLINGE-------------LKAAYCLTEPGSGSDALAAKTRADLSADG 173

Query: 225 I-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y  +G K ++S+   +D FI+ A+++G          + +    GL     + K+G +
Sbjct: 174 KNYLFNGQKMWISNAGFADLFIVFAKIDGDK----FTGFIVERDSAGLTLGAEEKKLGIK 229

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T ++ F NT   +   L  +  G +     L         +S+ G + S+  AI YA
Sbjct: 230 GSSTRQVFFENTPVPVENVLGKIGKGHLIAFNALNTGRFKLCALSLGGAKYSVTTAIRYA 289

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSRS 387
             R   G  +     ++  +A+ A+ I +  +  FR++N  +              ++  
Sbjct: 290 NERIQFGVPISSFGAIQYKLAEQAIRIFSTESALFRVSNLMELKKQEFEANGASFGEAEL 349

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           + A    I   I K    +    V+ E ++  GG G+ EE + AR YR++  N I  G+ 
Sbjct: 350 KAAEEYAIECSILKVTGSEALDYVVDETLQVHGGMGFSEEGTAARAYRDARINRIYEGTN 409

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
               L  +++L K               +      + +  ++     +E K +  F    
Sbjct: 410 EINRLLSIDMLLKRAMKGALDIVGPAWQVQKELASMPSFEKEEGLYAEEKKAVKDFKKAV 469

Query: 508 IALASSAAALYRAG 521
           + +A +AA L   G
Sbjct: 470 LMVAGAAAKLQMEG 483


>gi|146275645|ref|YP_001165805.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322336|gb|ABP64279.1| acyl-CoA dehydrogenase domain protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 394

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 135/408 (33%), Gaps = 38/408 (9%)

Query: 59  ELLGEYVLSCTAQELARMANYN--TPQLHAY--GPGGERWDKVEFHPAWHALLRRSIHDG 114
           + LG   L    + + R A       +L                  PA    +      G
Sbjct: 11  DALGLEGLLTDDERMIRDAARAFAQDRLQPRVIDAFANE----HTDPAIFREMG---EQG 63

Query: 115 LHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           L        +        ++ + A  +  +       +   S      +    +    + 
Sbjct: 64  LLGVTLPEDYGCAGAGYVSYGLVAREVERVDSGYRSMMSVQSSLVMFPIYEYGSEEQRRK 123

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P++ S E+                 GLTE   G+D   + +  +K+  G        W
Sbjct: 124 YLPRLASGEW-------------IGCFGLTEPDAGSDPGGMRTTARKVDGGYVLSGSKTW 170

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             ++P++D F++ A+ +   G   +   + +    GL   +++NK+  R++ T  +   +
Sbjct: 171 ISNAPIADVFVIWAKSDAHDG--GIRGFVLEKGMKGLSAPKIENKVSLRASITGMVVMDD 228

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
            F     LL ++    GP   +        +  S+       A A  Y   RH  G  L 
Sbjct: 229 VFVPDDALLPNVQGLKGPFGCL-NRARYGISWGSLGAAEFCFAAARQYGLDRHQFGRPLA 287

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + ++ +AD+  DI      S R+    DE        A+A  M  I K      A  
Sbjct: 288 ATQLFQKKLADMMTDITLGLHASLRVGRLMDEG-------AFAPEMISIVKRNNVGKALD 340

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +   A +  GG+G   E  + RH       +   G+ +   L +   +
Sbjct: 341 IARIARDMHGGNGISGEYQVIRHMVNLETVNTYEGTHDVHALILGRAI 388


>gi|296167856|ref|ZP_06850039.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896981|gb|EFG76604.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 381

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 24/296 (8%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           TTP   + W P + + E               +G+ +TE   G+D+A I +   +  D  
Sbjct: 105 TTPEQQQRWLPGVVTGE-------------TVLGIAMTEPGTGSDLAGIRTAAVRDGDH- 150

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           Y ++G K F+S+       ++A          +  L+ D    G    R   KIG  +  
Sbjct: 151 YVVNGAKTFISNGQCGDLFVVAVRTSPDRHTGLSLLVVDAGTPGFSRGRNLEKIGLHAQD 210

Query: 286 TVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F++    +   L     G  + M+ L    L   + +V+     LAE + Y R+R
Sbjct: 211 TSELTFTDMRVPVANLLGEEGRGFYQLMQNLPQERLALGVGAVAAAEAILAETLDYVRQR 270

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +      +  +A++A +I  A           D+  ++          A   K+
Sbjct: 271 TAFGTPIAGFQHSQFVLAEVATEIDVARTY-------LDDCLAQHLAGELTAARAARLKW 323

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W   +        ++  GG GY+ E ++AR + ++   +I  G+   M   +   L
Sbjct: 324 WTTDLQVRTADRCLQLHGGYGYMREYAVARAFVDARIQTIYGGTNEIMKTIIAKDL 379


>gi|320165880|gb|EFW42779.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864]
          Length = 431

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 134/372 (36%), Gaps = 34/372 (9%)

Query: 104 HALLRRSI-----HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           H    R+I       G+  +       P V   A+ + A  +  +       +   S   
Sbjct: 85  HETFDRAIFTEMGKLGMLGATIQGYECPGVSSVAYGLIAREVERVDSSYRSAMSVQSSLV 144

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    T    K + P +   E             +    GLTE   G+D  ++ ++ 
Sbjct: 145 MYPIYAYGTEAQRKKYLPGLARGE-------------LVGCFGLTEPNHGSDPGSMETRA 191

Query: 219 QKISDGIYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K   G Y L+G   W  +SP++D F++ A+    V   ++   + +    GL   +++ 
Sbjct: 192 RKTPQGNYILNGAKMWITNSPIADVFVVWAKT---VEDGIIRGFVLEKGMKGLSAPKIEG 248

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K   R++ T E+   +       LL ++    GP   +        +  ++      +  
Sbjct: 249 KFSLRASPTGEIVMQDVEVPAENLLPNVEGLKGPFGCLTN-ARYGISFGAMGAAEFCMEA 307

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +I      S ++    D  K        A 
Sbjct: 308 ARTYTVDRKQFGRPLASNQLIQKKLADMLTEINLGLLASLQVGRLKDAGK-------LAP 360

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A  +   A + +GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 361 EMVSLVKRNNCGKALDIARVARDMLGGNGISDEYGVIRHVLNLEAVNTYEGTHDIHAL-I 419

Query: 455 LNLLEKGTNLFE 466
           L     G   F+
Sbjct: 420 LGRAMTGLQAFQ 431


>gi|254420960|ref|ZP_05034684.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196187137|gb|EDX82113.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 254

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 13/262 (4%)

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVP 259
           +TE   G+D+  I ++ +   D  Y L+G K F+++  ++D  I++A+  E   G     
Sbjct: 1   MTEPGTGSDLQNIRTRARDAGDH-YVLNGSKIFITNGFLADLVIVVAKTGETGKGSADTS 59

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI-- 316
            +L +    G    +   K+G R+  T EL F +        L     G +  M+ L   
Sbjct: 60  LMLVEAGTPGFTKGKPLKKMGMRAQDTAELFFEDVRVPKENLLGSEGAGFLMLMQQLAWE 119

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  AI + +    +   A  Y + R   G  +     M+  +AD+  ++          
Sbjct: 120 RLMIAIQAQASAEAAFDIARDYVKSRTAFGRPVAAFQTMRHRMADMQTELGVGRTFV--- 176

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               DE            + A   K W  +M   VI + ++  GG G++ E  ++R + +
Sbjct: 177 ----DECLKAEIAGTLTPMAAAAAKMWVSEMCSRVIDQCVQMHGGYGFMWEYPVSRAFVD 232

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           + A+ I  G+ + M   +   L
Sbjct: 233 NRAHQIYGGTNDIMRELISRAL 254


>gi|254294859|ref|YP_003060882.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254043390|gb|ACT60185.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 392

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 128/361 (35%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +        A+ + A  +  +       L   S      +
Sbjct: 53  RHIMSEMGALGLLGATIPSEYGGAEASHVAYGLIAHEVEAVDSGYRSALSVQSSLVIHPI 112

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + W P + S               +    GLTE   G+D  ++ ++ +K+ 
Sbjct: 113 YTYGSEAQRQKWLPGLISG-------------DLVGCFGLTEPNHGSDPNSMETRAKKVD 159

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++  +++G +  F++     +   +GL    +K K+  R
Sbjct: 160 GGYELNGTKMWITNSPIADVFVVWGKLDGVIRGFVL-----EKGMDGLSAPEIKGKLALR 214

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----- 337
           ++ T E+   + F      L  + G          L+ A   ++   +  A A       
Sbjct: 215 ASITGEIVMDSVFVPEDNLLPNAKGLSGPFG---CLNKARYGIAWGALGAATACWSTARE 271

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD+  +I+   A   ++    DE K             
Sbjct: 272 YTIDRQQFGRPLAANQLIQKKLADMQTEISIGQAACLQIGRLLDEKKCPPTA-------I 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K      A A+  E  + +GG+G  +E  + RH     A +   G+ +   L +   
Sbjct: 325 SLIKRNSAGKALAIARECRDMLGGNGISDEFHVMRHMCNLEAVNTYEGTHDVHALILGRA 384

Query: 458 L 458
           +
Sbjct: 385 I 385


>gi|282936150|gb|ADB04332.1| putative butyryl-CoA dehydrogenase [bacterium enrichment culture
           clone N47]
 gi|308274020|emb|CBX30619.1| Probable acyl-CoA dehydrogenase yngJ [uncultured Desulfobacterium
           sp.]
          Length = 385

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 21/287 (7%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  K        LTE   G+D  A+ ++  K  D  Y ++G K F+S+    
Sbjct: 108 EQKQRFLVPAIKGEKIAAFALTEADAGSDAIALRTRAVKDGDD-YIINGSKMFISNGTFC 166

Query: 242 AFIMLA--QVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
            F+ +A    + +        +  ++ +    G    +LK K GNRS+ T +L F +   
Sbjct: 167 DFVPVACYTTDPKEVKKRGQGISLIVVEKGMPGFSATKLK-KSGNRSHETAQLYFEDVRV 225

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILID 351
                +      +   +IL  L S  +S       +A+A +     YA  R   G  +  
Sbjct: 226 PKENLIGEEGKGL--AQILTTLKSGRISYGARATGMAQAAYDLAFKYAHEREQFGKQIAK 283

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +    + D+A+ I     +++R A  + +  +  +EA   +I       +  +    +
Sbjct: 284 FQINTVKLVDMAMHIDIMRTMTYRAAWMYSQGMNCMKEACMLKI-------YATEKVQQL 336

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  A++  GG GY+ E +I R +R++   ++  G+     +     L
Sbjct: 337 MLLALDLHGGYGYMREYAIERLWRDAKMLNLTEGTTPINYMAAAREL 383


>gi|270157746|ref|ZP_06186403.1| glutaryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|289163985|ref|YP_003454123.1| glutaryl-CoA dehydrogenase [Legionella longbeachae NSW150]
 gi|269989771|gb|EEZ96025.1| glutaryl-CoA dehydrogenase [Legionella longbeachae D-4968]
 gi|288857158|emb|CBJ10974.1| putative glutaryl-CoA dehydrogenase [Legionella longbeachae NSW150]
          Length = 385

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 126/377 (33%), Gaps = 34/377 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMS 153
           D  E       L+R+S   GL        +        A+ +    L          +  
Sbjct: 36  DSFEHAQFPRELIRKSAELGLLGLTLPAEYGGAEASYVAYGLVCQELEKGDSGLRSFVSV 95

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +    +      + P + + E             +    GLTE   G+D ++
Sbjct: 96  QSSLCMFPIFRYGSEEQKVRFLPGMATGE-------------IIGCFGLTEPDFGSDPSS 142

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  +K+  G        W  +SP++D  I+ A+ +  +  F+V     D   +GL   
Sbjct: 143 MRTTAKKVDGGWCLNGAKMWITNSPIADIAIVWAKTDEGIRGFIV-----DTDSHGLSRP 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGM 328
            +K K+  R++ T EL F N F      L  S   +     L  L  A   +        
Sbjct: 198 EIKLKMSLRASITGELVFDNVFVPDENYLPGSDKGIGA--PLSCLSQARYGIAWGAMGAA 255

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                    Y   R      L    ++++ +AD+  +I  A  L+ ++    D  +    
Sbjct: 256 MACFDITRDYLLERKQFNKQLASFQLIQKDLADMYTEIIKAQCLNLQVGRIKDHHRENP- 314

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 +M  + K   C+ A  +  +    +G +G   E  + RH     +     G+ N
Sbjct: 315 ------VMISLAKGNACREALKIARKCRNLLGANGISLEYHVIRHMLNLESVFTYEGTDN 368

Query: 449 AMVLDVLNLLEKGTNLF 465
              L VL     G N F
Sbjct: 369 VHTL-VLGKHITGINAF 384


>gi|289749501|ref|ZP_06508879.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
 gi|289690088|gb|EFD57517.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis T92]
          Length = 271

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 12/265 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P         L +TE  GG+D+  + +   +  D  Y ++G K +++S +   +++ A  
Sbjct: 3   PTLAGEKIGALAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVR 61

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G   V  L+ +    G    R  +K+G RS+ T EL +++       L+G  N   
Sbjct: 62  TGGPGAAGVSLLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGF 121

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +    +   +  A  + S  +  L     + R R   G  LI +  ++  +A++A  I
Sbjct: 122 TQIARAFVSERIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRI 181

Query: 367 AAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             A   +  +       ++    +  +A+  A     W       V  +A++  GG GY+
Sbjct: 182 DVARVYAHHVVERQLAGETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGGMGYM 234

Query: 426 EERSIARHYRESPANSILLGSGNAM 450
            E  + R YR+     I  G+   +
Sbjct: 235 AESEVERQYRDMRILGIGGGTTEIL 259


>gi|121611102|ref|YP_998909.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555742|gb|ABM59891.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 139/382 (36%), Gaps = 28/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+  E  PA H + ++  + G         F  +    +++I         
Sbjct: 19  REITPHIDEWEAAEIFPA-HDIFKKLGNAGFLGVNKPVEFGGMGLDYSYEI------AFC 71

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +   G        + ++   M TP + +       S E       P       + LG++E
Sbjct: 72  EAIGGIGAGGVGMAIAVQTDMATPALARFG-----SDELRERFLKPTVAGDYVVCLGVSE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVP 259
              G+D+A++ +  +K  D         W  +   +D   +LA   G           +P
Sbjct: 127 AGAGSDVASVKTTARKDGDDYVINGSKMWITNGLQADWMCLLANTGGEDPHRNKSLICLP 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--I 316
                    G+   ++K K+G  S+ T ++ F +        +     G +  MK     
Sbjct: 187 LRENGKLRPGITMNKIK-KVGMWSSDTAQVFFDDVRVPQRYRIGEEGKGFIYQMKQFQEE 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A   V+ +   + E I Y R+R   G  ++D  V+   +A++  +I    +L +R 
Sbjct: 246 RLSGATRRVTALMNVVHETIDYTRQRKAFGQSILDNQVVHFRMAELKTEIELLRSLIYRA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A         +E       +A + K    ++   V    ++  GG G+  + S++R +R+
Sbjct: 306 AQVHMADGDMTE-------LASMAKLKAGRLCREVTDSCLQYWGGMGFTWDNSVSRAWRD 358

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
               SI  G+   M+  +   +
Sbjct: 359 LRLISIGGGADEIMLTIICKHM 380


>gi|304405251|ref|ZP_07386911.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346130|gb|EFM11964.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 379

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 132/372 (35%), Gaps = 32/372 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK    P   AL+R             R +    +          ++  A    
Sbjct: 26  PIAAAIDKEGKIPL--ALIRAMGEHHYLAPFIPRIYGGAEQDMIAVGIVNEIFGTACSSV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +++     A  +    T    + W P + S E                  GL+E   G
Sbjct: 84  RGILTVQGMVAMAIWRWGTEEQRRKWLPLLESGE-------------AVGAFGLSETSAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TD  ++ ++  +  D        KW     ++D +++ A+ EG++  FLV R     +  
Sbjct: 131 TDAQSLETKAVRNGDSFLLQGTKKWISLGQLADIYLIFAKCEGQISLFLVER-----NTP 185

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           GL  + +    G R +   EL            +  S G    M  L  LD    +V+  
Sbjct: 186 GLTVEPIPPLAGLRGSMLAELRLEQCRVREDSLVG-SIGTGLSMIGLFCLDYGRYTVAWG 244

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A      A+ YA  R+  G  L +  ++++ I ++ + + AA  L        DE 
Sbjct: 245 CVGIARSCIEHALAYAASRNQFGSQLSEFQLIQKMITEMVVGLEAARLLCLEAGRMRDEG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S       +     KY+  K+      ++++  G SG ++   + RHYR++    I+
Sbjct: 305 DPDS------IMETWKAKYFASKLVVETAGKSVQIHGASGLVQGTPVERHYRDAKVYEII 358

Query: 444 LGSGNAMVLDVL 455
            G+     + + 
Sbjct: 359 EGTSQVHEIFIA 370


>gi|302549857|ref|ZP_07302199.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467475|gb|EFL30568.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 408

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 132/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQVGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
              GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 GTPGLAQGQKFKKHGIRASHTAEVILDNVRVPGSCLLGGKEKLDERLARARERAKQSGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 SIDAARLLVWRASWMAVNGKPFTAA------EGSMSKLFASETAKKVTAQAIQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|239813137|ref|YP_002942047.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239799714|gb|ACS16781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 399

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 139/398 (34%), Gaps = 39/398 (9%)

Query: 71  QELARMAN--YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           + + R A   Y   +L      G R    E  PA    +      GL        +    
Sbjct: 23  ERMIRDAANAYCQERLAPRVIEGFR--SGETDPAIFREMG---ALGLLGPTIPEQYGGPG 77

Query: 129 RKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
               A+ + A  +  +           S      +    T    + + PK+ + E+    
Sbjct: 78  LNYVAYGLIAREVERVDSGYRSMASVQSSLVMVPINEFGTEAQKQKFLPKLATGEW---- 133

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                        GLTE   G+D  ++ ++ +K+  G        W  +SP++D F++ A
Sbjct: 134 ---------IGCFGLTEPDHGSDPGSMVTRAKKVPGGYSLSGAKMWISNSPIADVFVVWA 184

Query: 248 QVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +     G    +   + +    GL    +  K+G R++ T E+     F         + 
Sbjct: 185 KEVSESGTVGPIRGFVLEKGTKGLSAPAIHGKVGLRASITGEIVMDGVFCPEEN----AF 240

Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360
             V+ +K     L+SA   +S   +  AE     A  Y   R   G  L    ++++ +A
Sbjct: 241 PEVQGLKGPFTCLNSARYGISWGALGAAEDCWHRARQYTLDRKQFGRPLAANQLIQKKLA 300

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I      S RL    DE  +  E       +  I K   C  A  +   A + +G
Sbjct: 301 DMQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCGKALDIARLARDMMG 353

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 354 GNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAI 391


>gi|302552787|ref|ZP_07305129.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302470405|gb|EFL33498.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 608

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/556 (17%), Positives = 190/556 (34%), Gaps = 81/556 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFIDADRNPPV---FDP---ETNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTAPRSLIWSYAELILGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNEVQKHIAKVATEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+ L D      G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYLFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVSGGILI-------------DQPVMKRAIADIALDIAAATALSFRLA 377
               A+ YA+ R   G  L                P ++R++           AL    A
Sbjct: 313 GYLNALEYAKERVQ-GPDLANFMDKTAPKVTVTHHPDVRRSLMTQKAYAEGMRALVLYTA 371

Query: 378 NSFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +  DE        +  S   A   ++ PI K +  +     +A++++  GGSG+++E  I
Sbjct: 372 SIQDEIQVKESAGEDVSALEALNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPI 431

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITI 486
            ++ R+S  +++  G+      D     ++         L   +++   LG+ G+++   
Sbjct: 432 EQYIRDSKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSLAEDIKKFLALGTGGEELAGA 491

Query: 487 LRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---H 542
                    E + +   +   +A        +Y+ G+N         R L         +
Sbjct: 492 REHLAKAAVELEAIVGLMLTDLAATEQDVKNIYKVGLNT-------TRLLMASGDVVVGY 544

Query: 543 CMLHGRFNAAHIIDSL 558
            +L G   AA  +++ 
Sbjct: 545 LLLKGASIAAEKLETA 560


>gi|254466189|ref|ZP_05079600.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
 gi|206687097|gb|EDZ47579.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I]
          Length = 561

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 140/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A  +  +       +  G L + S  +A ++  
Sbjct: 212 EVIEELAEMGVFGLTIPEEYGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     +W PK+ S E  PT                TE   G+D+ ++ ++  K  +G
Sbjct: 272 GGTEEQKANWLPKLASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDENG 318

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 319 DYKITGNKTWITHAARTHVMTLLARTDPNTTDHRGLSMFLAEKTPGTDEHPFPTEGMTGG 378

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F N        L G+ N     + +      + +A  ++   +
Sbjct: 379 EIE-VLGYRGMKEYELGFDNFHVKKENLLGGEENKGFKQLMETFESARIQTAARAIGVAQ 437

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI  P +   +A +A++I  A  L++  A   D       E
Sbjct: 438 SALDIAMQYAQERKQFGKALISFPRVSGKLAMMAVEIMIARQLTYFSAWEKDHGHRCDLE 497

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 498 AGMAKLL-------GARVAWAAADNGLQIHGGNGFAMEYKISRVLCDARILNIFEGAAEI 550

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 551 QAQVIARRL 559


>gi|39934169|ref|NP_946445.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192289694|ref|YP_001990299.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648017|emb|CAE26537.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192283443|gb|ACE99823.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 404

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/432 (18%), Positives = 145/432 (33%), Gaps = 65/432 (15%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGERWD 95
            D LL          +  +L    E ++  TA+  A+   +   N   L       E+ D
Sbjct: 19  DDPLL----------LEDQLTED-ERMIRDTARAYAQDKLLPRINQAYLE------EKTD 61

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +  F+             GL        +        A+ + A  +  +           
Sbjct: 62  REIFNEMG--------SLGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQ 113

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +         K + PK+ S E+                 GLTE   G+D   +
Sbjct: 114 SSLVMYPIYAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDPGGM 160

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +K++DG        W  ++P++D F++ A+         +   + +    GL   +
Sbjct: 161 KTKAEKVADGYRLTGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPK 218

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           LL +++   GP         L+ A   +S   + 
Sbjct: 219 VGGKLSLRASITGEIVMDGVVVPEDALLPNVSGLKGP------FGCLNRARYGISWGAMG 272

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    ++++ +AD+  +I      S R+    DE K  
Sbjct: 273 AAEDCFHRARQYTLDRKQFNRPLAATQLVQKKLADMETEITLGLQASLRVGRLMDEGK-- 330

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +   A +  GG+G   E  + RH +     +   G+
Sbjct: 331 -----MAPEMISIVKRNNCGKALDIARMARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 385

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 386 HDVHALILGRAI 397


>gi|306841174|ref|ZP_07473890.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306845332|ref|ZP_07477907.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306274248|gb|EFM56060.1| acyl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306288800|gb|EFM60118.1| acyl-CoA dehydrogenase [Brucella sp. BO2]
          Length = 387

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 121/363 (33%), Gaps = 18/363 (4%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E     H  L      G+  +    ++          +RA  +   A       ++    
Sbjct: 39  ETSRFVHVQLATLAEVGMLGANLPEAYGGSGISAPALLRAVSIVAGACGSTASALTAHYL 98

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   + +  T    ++W PK  + E                   LTE   G+D A + ++
Sbjct: 99  ATDSILIGGTEEQKQEWLPKAATGE-------------ALAAFALTEPTAGSDPADMKTR 145

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++  +G +      +  +  ++D  ++ A  +       +   +   +  G      + 
Sbjct: 146 ARRTQNGWHLKGTKCFISNGGVADFVVVYAVTDPEKAHRGISAFILPKATPGFEAGPPEK 205

Query: 278 KIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            +G +      L          LLG+          +     ++ A   +     ++  A
Sbjct: 206 TMGLKGGHVFTLNLDCELPENALLGEEGRGFRTAMQVLDNGRIEVAAQCLGLAGAAMHAA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R + G  L ++  ++  IAD+ L   +A  LS   A   D A       + A  
Sbjct: 266 VAYAKERIIGGMPLSERQGIRWMIADMGLAYRSALLLSQEAARQRDLAHHHGGRFSLA-- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K    + A  +   A++  GG GY  +  I R  R+     I  GS     + + 
Sbjct: 324 -ASMAKLGASEAAYKIADTALQLHGGYGYTRDFPIERINRDLRIMRIYEGSSEIQRIIIS 382

Query: 456 NLL 458
             +
Sbjct: 383 GNM 385


>gi|289583061|ref|YP_003481527.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532614|gb|ADD06965.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 414

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 44/382 (11%)

Query: 101 PAWHA----LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           PA+      + ++S+  G +                 +                 +    
Sbjct: 52  PAYREVVETIRKKSVEAGFYGMTMPEEVGGGDVDILTRAIVGEHMANRPPGFHSAIFGGA 111

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
              + + L       + +               P+    +     LTE   G+D   + +
Sbjct: 112 GGPTPILLACDEEQRERYL-------------QPLMDGEITTCFALTEPGHGSDAHHMDT 158

Query: 217 QGQK----------------ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVP 259
             +K                  D         +  + P +D  ++ A+  G  G    + 
Sbjct: 159 VAEKSESHSDSERSGTAAENDGDEWVINGQKVYITNGPYADFAMVFARTSGEDGDLHGIT 218

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILI 316
             L +    G     +   +G       EL F +       +LG+++             
Sbjct: 219 CFLVEADNPGFEVGTIHRSMGMTPGQHAELHFDDCRVGEDQILGEVDQGFTAAMSWIGGG 278

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            ++ A  SV   +  L  ++ YAR R      +  +  +   +AD+A DI     L    
Sbjct: 279 RINIAANSVGTAQYLLDMSVEYARDRETFDKPIGHRQGVSFQLADLATDIEQTRQLYRYA 338

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D      +E + A       K    ++A      AM+  GG+GY++E  I R+YR 
Sbjct: 339 AWKMDNGDRARKEESMA-------KLRGAELANKAADIAMQVHGGAGYMKELPIERNYRS 391

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+       +   L
Sbjct: 392 ARVFRIFEGTDEIQKRTIAREL 413


>gi|239978161|ref|ZP_04700685.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291450057|ref|ZP_06589447.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291353006|gb|EFE79908.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 408

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 133/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKVGIYSLDFYAQQYFDSTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DVNDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDSELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 NTPGLSQGQKFQKHGIRASHTAEVVLENVRVPGSCLLGGKEKLDERLARARERAKSGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +  EA+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEEALEYAKTRTQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R +      K  +           ++K +  + A  V  +A++ +GG+GY
Sbjct: 315 SVDAARLLVWRASWMAVNGKQFTAA------EGSMSKLFASETAKKVTGQAIQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|317122676|ref|YP_004102679.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315592656|gb|ADU51952.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 566

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 114/517 (22%), Positives = 199/517 (38%), Gaps = 76/517 (14%)

Query: 33  GMNAYSSDSLLVALIANF-PSVV--HKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           G N +  D  L  ++A++ P  +    EL   G        +    + +   P L  +  
Sbjct: 9   GQNHWERDPDLRHVLAHYWPGYIAHEDELRRFGALAGKEVYEVAYHVDHDARPVLVMHDL 68

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+V   P   ALLR                 P     +     A  YL+A     
Sbjct: 69  DGNRVDRVRLSPVQEALLRELA----------PMNRPPYEGGSWHHHYALGYLVADPGIY 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +++ +  +A ++          +W  K+   E+                  +TE +GG+
Sbjct: 119 CILTITNQTAYIIHKYAPE--FGEWKDKLLRGEFWG-------------ATWMTEVQGGS 163

Query: 210 DIAAITSQGQKIS-----DGI----------------------------YCLSGHKWFLS 236
           D+ A T +    +     DG                             + L G K+F S
Sbjct: 164 DLGANTLKATPAAEAVTRDGSVGAGSSRAHTGPADAGPAGSVPGAPPRVWRLDGEKYFCS 223

Query: 237 S-PMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              ++D  ++ A+ EG       +  FLVPR+   G  N    +RLK+K   R+  + E+
Sbjct: 224 GAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNRAGELN-YHVRRLKDKSATRAVPSGEV 282

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +F  +  FL+G+         ++  +  L +AI  +   R +  E +   RRR   G  L
Sbjct: 283 DFRGSEAFLVGEAAQGIYYTLEVLTVSRLANAIAGMGIARKAHLEVLERVRRRRSFGRAL 342

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLAN----SFDEAKSRSEEAAYARIMAPITKYWCC 405
           I+ P+++R + D+A+ IA    L F  A+    ++DE    +    YAR ++ + K    
Sbjct: 343 IEHPLIRRDLTDMAVRIAGGLVLGFHAADRFEKAWDERPPYTARYHYARFLSHLAKNRTA 402

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT--- 462
             A  V   AME  GG G++EE ++AR +RE+    I  G  N   LD+L  ++K     
Sbjct: 403 DHAAEVTRLAMELFGGLGFLEEYAVARWHREALITPIWEGPSNIQALDLLEAMDKKRAHE 462

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
               +    LE+      +    ++  +++   E   
Sbjct: 463 AFLAEFIPMLEKAGTPEARAAREVIEGTLARLGELAA 499


>gi|184201921|ref|YP_001856128.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183582151|dbj|BAG30622.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 393

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 140/405 (34%), Gaps = 37/405 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   Q L+        +     P   + D+    P  + +  +    GL    +   + 
Sbjct: 12  LSEEYQALSDAVREFADE--EIAPVSAKHDEEHSFP--YEIQSQMAEMGLFGLPFPEEYG 67

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A  +   ++  + Q  A  L +     A  V L  T    + W P++ S    
Sbjct: 68  GQGGDYFALCLALEQIARVDQSVAITLEAGVSLGAMPVYLFGTEEQKQQWLPQLASG--- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                         G GLTE   G+D     ++     DG + ++G K F+++  +D   
Sbjct: 125 ----------QALAGFGLTEPEAGSDAGGTRTRAALT-DGNWVINGSKEFITNSGTDITK 173

Query: 245 MLAQVE--------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           ++                   +  +L      G   Q+  NK+G  ++ T  L F +   
Sbjct: 174 LVTVTAVTGTTTTADGREKKEISTILVPTDTPGFTAQKAYNKVGWNASDTHPLTFEDVTV 233

Query: 297 FLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                L     G    ++IL    +  A ++    +  L EAI YA  R   G  +    
Sbjct: 234 PEANLLGERGRGYANFLRILDEGRIAIAALATGAAQGCLEEAIRYATEREQFGRSIGKNQ 293

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   IA +   +  A    +  A+   + K    EAA       I K    + A     
Sbjct: 294 AVAFKIARMRARVHQARLAYYDAASRMLKGKPFKTEAA-------IAKLVAGEAAMDNAR 346

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A +  GG G+I E  +ARHYR+S    +  G+    ++ +   L
Sbjct: 347 DATQVFGGYGFINEFRVARHYRDSKILEVGEGTTEVQLMLIAREL 391


>gi|329935741|ref|ZP_08285546.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329304832|gb|EGG48705.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 608

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/517 (16%), Positives = 176/517 (34%), Gaps = 69/517 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P   R +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFADADRNPPV---FDP---RTNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MESEYWRLGLPEEIGGTTAPRSLIWAYAELILGANPAVWMYSSGPAFAGILFDE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E                 + LTE   G+D+ A  ++  + +DG + + G
Sbjct: 142 ---------GNETQKHIAKIAVDRQWGSTMVLTEPDAGSDVGAGRTKAVEQADGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQ 273
            K F++S   D        +LA+ EG   G   +   L             G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYEFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G + + T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKVSNTCEMTFGDKHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKSAPKVTITHHPDVRRSLMTQKAYAEGMRALVMYTAS 372

Query: 379 SFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D       + +  S E A   ++ PI K +  + A   +A++++  GGSG+++E  + 
Sbjct: 373 VQDAIQVKEADGEDASAEHALNDLLLPIVKGYGSEKAYEQLAQSLQTYGGSGFLQEYPVE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R+S  +++  G+      D     ++         L   +++  +LG+ G+++    
Sbjct: 433 QYIRDSKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSLAGDIKKFLELGTGGEELAGAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMN 523
                   E + +   +   +A        +Y+ G+N
Sbjct: 493 EHLAKAAVELESIVGTMLTDLAATEQDTKNIYKVGLN 529


>gi|320012176|gb|ADW07026.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 408

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 134/394 (34%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAASEWDEREETP--WPVIQEAAKVGIYSLDFYAQQFFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------------STGPVED 311
           +  GL   +   K G R++ T E+   +        L                +    E 
Sbjct: 195 ATPGLTQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDERLARARERARSGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRTQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A +V A+A++ +GG+G+
Sbjct: 315 QIDAARLLVWRASWMASAGKPFTAA------EGSMSKLYASETAKSVTAQAVQILGGNGF 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|238755619|ref|ZP_04616955.1| Acyl-CoA dehydrogenase fadE20 [Yersinia ruckeri ATCC 29473]
 gi|238706132|gb|EEP98513.1| Acyl-CoA dehydrogenase fadE20 [Yersinia ruckeri ATCC 29473]
          Length = 376

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 130/360 (36%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMV 162
               R +   G+        +    +            L+ A++ A  +++ +   AS +
Sbjct: 36  RDFWRHAGEAGILGIGVSGRWGGQNQADYQYASVLTEELIRAEMTAPVVIAHNDVIASYI 95

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      W P +              K  +   + +TE  GG+D A + +   +  
Sbjct: 96  DAHGTDEQRDRWLPGLC-------------KGELIAAIAVTEPNGGSDSADLETTAVRQ- 141

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++ ++   I+ A +         +  L+ +    G        K+G 
Sbjct: 142 DQHYVVNGQKSFITNGINADLILTAVRTSKAERGRGISLLVIERDTAGFTRGAPLKKLGW 201

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T  L FSN       L+G  N+             L  + ++V+   + L   + +
Sbjct: 202 HASDTANLHFSNCLVPCNNLIGKENIGNFYFMGGMPRERLSISTVAVATAELLLERTLEW 261

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            ++RH  G  +      +  +A++  ++  A        + F+  +    +AA       
Sbjct: 262 VKKRHAFGQPVGSFQHNRFRLAELDTNVRIARIYLNDAIDKFNRRELNVADAAR------ 315

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K W  ++   V  + M+  GG+GY+ +  I + +  S   +I  G+   +   +   +
Sbjct: 316 -IKLWTTELQIQVADQCMQLHGGAGYLSDSFIGKTWVNSRVQTIYGGTSEVLKEFISKSM 374


>gi|83593340|ref|YP_427092.1| glutaryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83576254|gb|ABC22805.1| Glutaryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 395

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 128/368 (34%), Gaps = 32/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A++      GL        +  P V   A+ + A  +  +       +   S      +
Sbjct: 53  RAIMTEMGALGLLGPTIPEEYGGPGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPI 112

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      W P + S E                  GLTE   G+D  ++ ++  K +
Sbjct: 113 YAYGSDAQKATWLPALASGE-------------KIGCFGLTEPDHGSDPGSMKTRATKTA 159

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D  ++ A+ E       +   L +    G    +++ K   R
Sbjct: 160 GGYRLNGAKMWITNSPIADLAVVWAKSEAHDDK--IRGFLVERGMKGFSTPKIEGKFSLR 217

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++ T E+   +        L ++ G          L+ A   +S   +  AE   +A R+
Sbjct: 218 ASLTGEIVLDDCVVPEANLLPLAEGLAGPFG---CLNKARYGISWGAMGAAEFCWHAARQ 274

Query: 343 H-----VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +       G  L    ++++ +AD+  +I      S R+    DE K+R E         
Sbjct: 275 YTLDRLQFGRPLAATQLIQKKLADMQTEITLGLLGSLRVGRLLDEGKARPEA-------I 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K      A  +   A +  GG+G  +E  + RH     + +   G+ +   L +L  
Sbjct: 328 SLVKRNNAGKALDIARVARDMHGGNGIADEFHVIRHVMNLESVNTYEGTHDVHAL-ILGR 386

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 387 AQTGLQAF 394


>gi|296394805|ref|YP_003659689.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296181952|gb|ADG98858.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 382

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 136/373 (36%), Gaps = 23/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P    L R +   GL    +  S              A   ++ +   
Sbjct: 26  PHAAEWEKAGQIP--RELHRAAGDAGLLGVAFPESAGGGGGD------VADSVVVCEELH 77

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +   V ++     +  P +     P++      PT        +    L +TE  GG
Sbjct: 78  EAGVPGGVFASLFTCGIAVPHIIASADPRLIDEFVRPTL-----AGAKIGSLAITEPGGG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +  ++  D  Y ++G K +++S +   +++ A   G  G   V  ++ + +  
Sbjct: 133 SDVGRLATTARRDGDH-YVINGAKTYITSAVRADYVVTAARTGGEGSAGVSLIVVEKTAP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A+ + 
Sbjct: 192 GFIVSRALDKMGWRSSDTAELSYTDVRVPAANLVGAENTGFAQIAAAFVAERVVLAVQAY 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  +  L  A+ + R R   G  LI +  ++  +A++A  I  A   +  +A        
Sbjct: 252 ASAQRCLDLALQWCRDRSTFGRPLISRQSVQNTLAEMARRIDVAKVYTRHVAERAASGDQ 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K    +    V  +A++  GG GY+ E  I R YR+     I  G
Sbjct: 312 D------LIAQVCFAKNTAVETGEWVANQALQLFGGLGYMAESEIERQYRDMRILGIGGG 365

Query: 446 SGNAMVLDVLNLL 458
           +   +       L
Sbjct: 366 TTEILTTLAARRL 378


>gi|312113483|ref|YP_004011079.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218612|gb|ADP69980.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 393

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 139/414 (33%), Gaps = 38/414 (9%)

Query: 61  LGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119
           L +  LS   + +A  A      +L        R ++ +       +L      GL    
Sbjct: 11  LLDDQLSEEERLIADSARAYCQERLQPRVLSAYREERFD-----REILTEMGELGLLGPT 65

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               F        A+ + A  +  +       +   S      +    T    K W P +
Sbjct: 66  IPEEFGGAGVSHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGTDAQKKRWLPGL 125

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E             +    GLTE   G+D A++ ++  K+  G        W  +SP
Sbjct: 126 ARGE-------------IVGCFGLTEPDSGSDPASMRTRAVKVDGGYLLSGQKMWITNSP 172

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D  ++ A+ +   G   +   + +    G    +++ K+  R++ T E+     F   
Sbjct: 173 IADIAVVWAKSDAHDGK--IKGFVVERGTKGFSTPKIEGKLSLRASITGEIVLDEAFVP- 229

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
             + N+  G          L+ A   ++      AE   +A R     R   G  L    
Sbjct: 230 --EENLLPGASGLAGPFGCLNKARYGIAWGVTGAAEFCWHAARDYTLARKQFGRPLAANQ 287

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +A +  +IA A   + R+    DE  +  E          + K   C  A  +  
Sbjct: 288 LVQFKLAGMQTEIALALQAALRVGRMLDEGTAAPEA-------ISLIKRNNCIKALDIAR 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           +A +  GG+G  +   + RH       +   G+ +   L +L   + G   F  
Sbjct: 341 QARDMHGGNGIADSFHVMRHMANLETVNTYEGTQDVHAL-ILGRAQTGIQAFTA 393


>gi|239942583|ref|ZP_04694520.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239989044|ref|ZP_04709708.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291446045|ref|ZP_06585435.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291348992|gb|EFE75896.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 608

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 85/500 (17%), Positives = 178/500 (35%), Gaps = 79/500 (15%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI-HDGLH 116
           LE +     +  A   A  A+ N P                F  ++ A +       GL 
Sbjct: 42  LEEIARLAENELADSFA-DADRNPPVFDPETKTAPV--PASFKKSYQAFMDSEYWRLGL- 97

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                         ++     A L L+    A  + S     A ++         K    
Sbjct: 98  ----PEEIGGTTSPRSLIWGYAEL-LLGSNPAVWMYSSGPAFAGILFEEGNDEQKKIAE- 151

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                           +      + LTE   G+D+ A  ++  +  DG + + G K F++
Sbjct: 152 -------------IAVEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFIT 198

Query: 237 SPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S   D        +LA+ EG       +  F+VP+   D      G  NG+    +++K+
Sbjct: 199 SGEHDMSENIIHYVLARPEGAGPGTKGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKM 258

Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +++ T E+ F +     G+L+GD +     +  +     +     +++ +      A+
Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIATLSTGYLNAL 318

Query: 337 HYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            YA+ R                  +   P ++R++           +L    A+  D  +
Sbjct: 319 EYAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQ 378

Query: 385 SRSEEAAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +      A+ +        PI K +  + +   +A++++  GGSGY++E  + ++ R++
Sbjct: 379 EQEAAGEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDA 438

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
             +++  G+      D               F  + +D G+S   +   ++  ++  + +
Sbjct: 439 KIDTLYEGTTAIQGQDF-------------FFRKIVRDQGASLNTLSEEIKKFLAGAQGN 485

Query: 498 KGLARFLTEKIALASSAAAL 517
           + LA  L    +LA +A  L
Sbjct: 486 EELAPALD---SLAKAAVDL 502


>gi|329908070|ref|ZP_08274824.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546771|gb|EGF31706.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480]
          Length = 394

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 127/360 (35%), Gaps = 39/360 (10%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL        +             +R           +MS  S    + +    
Sbjct: 57  REMGELGLLGPTIPEEYGGPGLNYVCYGLISREVERVDSGYRSMMSVQSSLVMTPIFEFG 116

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + E+                 GLTE   G+D  ++ ++ +K++ G  
Sbjct: 117 TEDQRQRFLPKLATGEF-------------IGCFGLTEPDHGSDPGSMVTRARKVAGGYA 163

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+ +       +   + +    GL    +  K G R++ T
Sbjct: 164 LTGSKMWISNSPIADVFVIWAKDDEGA----IRGFILEKGMAGLSAPAIHGKFGLRASVT 219

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
            E+   N F        D+    GP         L++A   +S   +  AE+  +  R  
Sbjct: 220 GEIVMDNVFCPEENAFPDVRGLKGP------FTCLNAARYGISWGALGAAESCWHIARQY 273

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I  A     RL    DE  +       A  +  
Sbjct: 274 VLDRKQFGKPLAANQLIQKKLADMQTEITMALQGVLRLGRMKDEGTA-------AVEITS 326

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  +  +   A + +GG+G  +E  + RH       +   G+ +   L +   +
Sbjct: 327 MMKRNSCGKSLDIARVARDMLGGNGISDEYGVIRHMVNLEVVNTYEGTHDIHALILGRAM 386


>gi|305667509|ref|YP_003863796.1| putative acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
 gi|88709557|gb|EAR01790.1| probable acyl-CoA dehydrogenase [Maribacter sp. HTCC2170]
          Length = 602

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/542 (16%), Positives = 183/542 (33%), Gaps = 88/542 (16%)

Query: 43  LVALIA--NFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKV 97
           L +++    +       +ELL   V   + +EL    +  + N     A+   G    ++
Sbjct: 21  LQSVLDQDRYADYDQASVELLLNSVKDFSDRELFPFFKEMDENP----AHFKNG----EI 72

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
             HP     ++     G     +      +         +A +   A       +  +V 
Sbjct: 73  VVHPQITKYMKDGGDMGFIAGSFSYENGGMQLPGMVSHASAFIQDAANNHMPGYIGLTVG 132

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +A ++       ++  + P + S ++  T             + LTE + G+ ++ I + 
Sbjct: 133 AAELITHFANQELNDTYVPNMLSGQWGGT-------------MCLTEPQAGSSLSDIVTS 179

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLEDGS----- 266
                D  Y + G K F+S            ++LA+++G   G   +   +         
Sbjct: 180 ATLDGD-SYKIHGQKIFISGGDYQGAENIVHLVLARIKGAPAGTKGISLFVVPKKRPIDD 238

Query: 267 ---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
              PN +       K+G +   T  L F +     G+L+G+ N     +  M     +  
Sbjct: 239 DLIPNDVTTVADFQKMGQKGYCTTHLFFGDKNDCQGWLVGEANKGLKYMFLMMNGARIGV 298

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVS------GGI--------LIDQPVMKRAIADIALDI 366
              + +    +   +++YA  R         G          +I+ P ++R +       
Sbjct: 299 GRGAAAIATAAYHASLNYANERPQGRQLTRTGKKDVNQEQTLIINHPDVRRMLLLQKAVS 358

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             + +L    A   D       A  R +      IM P+ K +  +M  + +   ++ +G
Sbjct: 359 EGSLSLVLLTAKYHDLSIASANADLREKYRLLLEIMTPVVKTYPSEMGKSAVDNGVQVLG 418

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G G+  +  + ++ R+    +I  G+      D+L                +  D G + 
Sbjct: 419 GYGFCSDYILQQYLRDIRIFAIYEGTTGIQSQDLLG-------------RKITMDNGKAL 465

Query: 481 KKVITILRDSISLCKEDKGL---ARFLTEKIALASSAAA-LYRAGMN-----DIADV--F 529
           + +   ++ SI      + L   A+ L  K+AL       L    M       +AD   F
Sbjct: 466 QLLSEEIQGSIKEAMAHESLVPYAKKLGGKLALTQQVLQSLMGFAMKGDYQRFLADATPF 525

Query: 530 LE 531
           +E
Sbjct: 526 ME 527


>gi|296536689|ref|ZP_06898753.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296262980|gb|EFH09541.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 397

 Score =  220 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 143/408 (35%), Gaps = 45/408 (11%)

Query: 69  TAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + + R A  +Y   +L        R +   FH     ++      G   +  D     
Sbjct: 26  EDERMIRDAARDYCQEKLFPRVLEANRHE--VFH---REIMNEFGEMGFLGATLDSHGCA 80

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
            V   ++ + A  +  +           S  +   +    T  +     P          
Sbjct: 81  GVNYVSYGLIAREVERVDSGYRSAFSVQSSLAMFPIWAYGTDALKDRLLPG--------- 131

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
               MQK  +    GLTE   G+D A++ ++ +K+  G        W  +SP++D F++ 
Sbjct: 132 ----MQKGELVGCFGLTEPDAGSDPASMRTRAKKVDGGYLVSGSKTWITNSPIADVFVVW 187

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNV 304
           A+ E       V   + +    GL   +++ K   R++ T  +     F       D+  
Sbjct: 188 AKDEAGD----VRGYVLEKGMKGLSAPKIEGKFSLRASITGMIMMEEVFVPEENKLDVKG 243

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAI 359
             GP         L+ A   ++   +  AE   +A       R + G  L +  ++++ +
Sbjct: 244 LKGP------FSCLNRARYGIAWGALGAAEFCWHAARTYTLERKMFGRPLANTQLIQKKL 297

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+  +I        RL   FDE +   E       M  + K   C  A  +   + +  
Sbjct: 298 ADMQTEITLGLQSVLRLGRLFDEHRVTPE-------MISLCKRNSCGKALDIARMSRDMH 350

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           GG+G  +E  + RH     A +   G+ +   L +L   + G + F  
Sbjct: 351 GGNGIADEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLSAFGA 397


>gi|312195523|ref|YP_004015584.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311226859|gb|ADP79714.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 604

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 92/547 (16%), Positives = 179/547 (32%), Gaps = 77/547 (14%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A         L  L E V +       R ++ N P    +   GER   V   P   A +
Sbjct: 37  AEHDRETFDALLDLAEQVATEHFYPHLRRSDLNEP---TFD--GER---VHLIPEIGAAV 88

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
                 GL  +  D                    + A +        ++ +++++    +
Sbjct: 89  DVFAKTGLIAATMDAEVGGAQLPVVVADACFSWLMAANVSTFSYPFLTIGNSNLLLAHGS 148

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     +        +  T             + L+E + G+ ++ I ++ +   DG Y 
Sbjct: 149 PEQVDAYVRPQLDGRFHGT-------------MCLSEPQAGSSLSDIITRAEPRPDGSYR 195

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271
           + G+K ++S+   +       ++LA++ G       +  F+VP+ L +     G  N + 
Sbjct: 196 VFGNKMWISAGEHELGENIVHLVLAKIPGGPAGVKGISLFVVPKFLVNTDGSVGERNDVV 255

Query: 272 YQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              L +K+G R      L F              G+L+G  +     +  M     +   
Sbjct: 256 LAGLNHKMGYRGTTNTLLNFGEGKYTPGGEPGAIGYLVGQPHQGLSYMFTMMNEARIKVG 315

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS----GG-------ILIDQPVMKRAIADIALDIAAAT 370
             +++       +++ YA+ R       G         +I+   ++R +      +  A 
Sbjct: 316 AGAMALGYTGYLKSLKYAKERPQGRPPAGKDARAPQIPIIEHADVRRMLLAQKSYVEGAL 375

Query: 371 ALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL        D+      A+ R         + PI K W  +        A++  GG GY
Sbjct: 376 ALVLYAGKLLDDERTAPTAEERDRAHLLLDTLTPIVKSWPSQWCLEANNLAIQIHGGYGY 435

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
             E  +  H+R++  N I  G+     LD+L    K         + L + + ++     
Sbjct: 436 TREYDVELHFRDNRLNPIHEGTHGIQGLDLLG--RKVALRGGAGLAALAEAVNATVSTAT 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIA-----------LASSAAALYRAGMNDIADVFLENR 533
               +   L  +       + E  A           LA+++  L   G   IA ++LE  
Sbjct: 494 AAGGELAELAGQLGATVERIVEVTAKLWGTGDPDVTLANASVYLEAVGHTVIAWLWLEQA 553

Query: 534 FLDNCHS 540
                  
Sbjct: 554 LAAAGRQ 560


>gi|115399798|ref|XP_001215488.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191154|gb|EAU32854.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 634

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 124/564 (21%), Positives = 219/564 (38%), Gaps = 76/564 (13%)

Query: 17  QPSDSLFA-LNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTA 70
            P+ +      +P      N Y+SD+ L   ++ +      + +   L  LG   +S   
Sbjct: 7   NPATAHTGHFTRPEPLQ--NTYTSDASLQRQLSWYIPHDTLTHIQSHLTQLGAEAISDQI 64

Query: 71  QELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           +E +  A    P + +Y   GER+D  K+     W  L R  +  G+    +D++  P  
Sbjct: 65  REWSANAERQQPYVKSYNVWGERYDYDKLVTSEGWKQLGRWGVRHGVVSLGYDQTLGPER 124

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           R     I+ A  YL A     +    S+T  +   L      H    P            
Sbjct: 125 R----LIQYAVNYLYAPSSGLYSCPISMTDGAARVLTN----HLSALPADHPFHAVFQKL 176

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI------------SDGIYCLSGHKWFLS 236
               + S   G  +TE+ GG+D+    +                  +G Y ++G K+F S
Sbjct: 177 TSRGEDSWTSGQWMTERTGGSDVQETETWATYSPATHTSQASNGLDEGDYLINGFKFFSS 236

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVP--RLLE--DGSP----NGLCYQRLKNKIGNRSNATV 287
           +  ++  ++LA+   G++  FL P  + +   DG+P    NG+   RLKNK+G +   T 
Sbjct: 237 ATDANIALLLAKTASGKLSLFLAPLRKTVVGSDGTPREVTNGVRIHRLKNKLGTKELPTA 296

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           ELE  +    L+G L+     +  +  +    + I S++G R +++ A  +A+ R   G 
Sbjct: 297 ELELRDMRAHLVGALDAGIPTIAPLLNITRAHTFIGSLAGWRRAISIAKAFAKARTTVGE 356

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------------AKSRSEEAAYAR 394
            L   P+    +AD+ +    A  L F                      ++  E A   R
Sbjct: 357 PLWLIPMHLNLLADMEIRHRGAMNLGFFAIAVMAMTENPGAAPVAPHLPRAGDEAAVVLR 416

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNA 449
            +  I K    K A A I E  E +GG GY++     E +IAR  R +  N+   G    
Sbjct: 417 ALTAIGKAVVSKSAIAGIQECQEAMGGVGYMDEADEPEFNIARIMRNTIVNATWEGPTGV 476

Query: 450 MVLDVLNLLEKG--------TNLFEQLFSTLE-QDLGSSGKKVITILRDSISLCKEDKGL 500
           +  +++  L  G            E++   ++  +L  + K++ T     ++  K+ + L
Sbjct: 477 LASELIRFLLLGRKNNLATFAGWVERVVGMIKTAELADTLKEIWTAFVARLTATKQPRFL 536

Query: 501 A----------RFLTEKIALASSA 514
                       ++ E I LA  A
Sbjct: 537 LAEGHRTMFTMAWIVEGILLALDA 560


>gi|224369392|ref|YP_002603556.1| Acd8 [Desulfobacterium autotrophicum HRM2]
 gi|223692109|gb|ACN15392.1| Acd8 [Desulfobacterium autotrophicum HRM2]
          Length = 414

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 139/397 (35%), Gaps = 29/397 (7%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           T ++ AR    + P+           DK++F       L+ +    L    +   +    
Sbjct: 12  TLRDQARDFVKSIPRKMILDMDA---DKIQFP---REFLQEAGRLNLMGCRYPEKWGGRG 65

Query: 129 RKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                       + ++  + A      +      + L  T    + +             
Sbjct: 66  MDWVSTCMVMEEIGVLGYIFACTFGVGAELVCDAIILHGTDDQKERYVK----------- 114

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
             P+ K  +     LTE RGG+D    T+  + + D        ++ +    +D F++ A
Sbjct: 115 --PLLKGEIFAAECLTEPRGGSDFFGTTTTARDMGDHFLLNGQKRFIVGGEGADYFLVYA 172

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           + +  V     +   + D    G+  Q L   +G R      + F +       L+G+LN
Sbjct: 173 RTDTDVEPRNGISCFIVDRQ-EGVETQYLYGLMGCRGGGAARMVFKDVKVPRYNLVGELN 231

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                   M I   L +A M++     ++  A  Y  +R   G  +     +   +A+  
Sbjct: 232 QGVKIFNTMMIPERLGTAAMTIGAAAPAVDVATGYTSKRKAFGKPVAAFQGVSFQVAEAV 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             + AA A+ +  A + D  K   ++    R +   +K +  +     +  AM+ +GG G
Sbjct: 292 TLLDAARAMIYTTARAVD-GKIYEKKI---RRLVSQSKKFVTESCQKAVHNAMQVMGGIG 347

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           Y     + R +R+    SI  G+   M + + N   K
Sbjct: 348 YTNIYPVERIFRDLRLASIWTGTNEVMSMIIANEWYK 384


>gi|347404|gb|AAA16096.1| 2-methyl branched-chain enoyl CoA reductase [Ascaris suum]
          Length = 412

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 103/313 (32%), Gaps = 19/313 (6%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                 +  +  T  + +       S E        M +  +           G+D++ I
Sbjct: 102 GYGCTGIATVFMTNDLAETPLIVAASEEVKKKYLGRMTEEPLIAAYA---PNAGSDVSNI 158

Query: 215 TSQGQK---ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPN 268
            ++ +K     D         W  ++  ++ + +L + +              + +    
Sbjct: 159 KTKCEKKVTEGDEYIINGSKMWITNAGPANWYFVLCRSDPNPKAPTSKAFTAFVVEADSP 218

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMSVS- 326
           G+   + +  +G  ++ T  L F +        +     G V  M+       A+  ++ 
Sbjct: 219 GITKGKKEKNMGQHASDTRGLTFEDVRVPASNMVGPPGEGFVVAMRTFDRTRPAVAGLAT 278

Query: 327 -GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 L EA  YA  R   G  + +   +   +   A+++  +  +++R A        
Sbjct: 279 GLQARCLDEASKYALERKTFGIPIANHQAVATMLMADAINMELSRMITYRCAWEVMSGVP 338

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R          + + K +    A    + A++ +GG+GY  E  + +  R++    I  G
Sbjct: 339 RG-------YYSSMAKCFAADSANIAASNAVQILGGNGYNSEYPVEKLMRDAKLFQIYEG 391

Query: 446 SGNAMVLDVLNLL 458
           +     + V   L
Sbjct: 392 TCQIQRVVVSRNL 404


>gi|118591690|ref|ZP_01549086.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118435683|gb|EAV42328.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 524

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 85/473 (17%), Positives = 157/473 (33%), Gaps = 44/473 (9%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQL-HAYGPGGERW--DKVEFHPAWHALLRRSI 111
             +L      + +      A  A      L       G R    +V+    +        
Sbjct: 21  AADLPDFDAELAAEIGGHFAAFAEEQLAPLNEPGDSQGCRLVEGRVQMPDGFREAYAAYA 80

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G                       + ++  A      + S +  +A  +    T    
Sbjct: 81  EQGWPGLTIPEQLGGQGLDAGALAITSEIFTGANHSLQMVTSLAAGAARTLLAFGTEDQQ 140

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
               P+  S E                 + LTE   G+D++ I  +  +  DG + +SG 
Sbjct: 141 ARVIPQFASGE-------------ALATMCLTEPDAGSDLSRIRCRAVQAGDG-WSISGE 186

Query: 232 KWFLSSPMSDA-----FIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           K F+S    D       ++LA+        +  FL P    DGS N +   R++ K+G  
Sbjct: 187 KIFISGGDQDMSEKIYHLVLARTSDEGVKGLSLFLCPCTRADGSRNAVTVTRIEEKMGLH 246

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           ++ T +L F      L+G        +  M     +D A+  V+    +   A  YA  R
Sbjct: 247 ASPTCQLAFDGAMAELIGREGEGLKAMFTMMNHARVDVALQGVAHAARAADIASAYAAER 306

Query: 343 HVS----GGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                  G    L     ++R + +I        A++     + +  ++R    A A  +
Sbjct: 307 KQGRDAAGKPVTLDGHVDVRRMLDEIDALALGGRAIAHLALVTVEAGENR----ALAEFL 362

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM--VLDV 454
            PI K +C +         M+ +GG GY++E  + + YR+    +I  G+       L  
Sbjct: 363 TPIAKTFCTQAGMQATELGMQVLGGYGYLKEYFLEQCYRDVRITAIYEGANAIHERALVT 422

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL------RDSISLCKEDKGLA 501
             L  K    FE       Q   ++  ++  ++      R+ +   ++   LA
Sbjct: 423 RLLPGKEGKAFEDFLRAECQRNDTAYHQLSEVVAHWCHAREQLLQSEDPTALA 475


>gi|83312330|ref|YP_422594.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82947171|dbj|BAE52035.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 392

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 121/361 (33%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL        +  P V   A+ + +  +  +       +   S      +
Sbjct: 50  REIMNEMGEMGLLGPTIPEEYGGPGVNHVAYGLISREVERVDSGYRSAMSVQSSLVMHPI 109

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + P++ + E             +    GLTE   G+D   + ++ +K+ 
Sbjct: 110 FSYGTEEQKKKYLPRLATGE-------------IIGCFGLTEPDAGSDPGGMRTRAKKVD 156

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP+SD  I+ A+ +   G   +   + +    G    +++ K+  R
Sbjct: 157 GGYLLTGSKMWITNSPISDIAIVWAKSDAHEGK--IKGFIVEKGIKGFTTPKIEGKLSLR 214

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++ T E+     F     D  +             L+ A   ++   +  AE   +A R 
Sbjct: 215 ASITGEIVLDEAFVP---DEALMPNASGLGGPFGCLNKARYGIAWGVIGAAEFCWHAARQ 271

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    + +  +A++  +I        R+    D+         +A    
Sbjct: 272 YMLDRKQFGRPLAANQIPQLKLANMMTEITLGLQACVRVGRMMDDH-------TWAPEAV 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A +  GG+G  EE  + RH       +   G+ +   L +   
Sbjct: 325 SLIKRNNCGKALDIARMARDMHGGNGISEEFHVIRHMVNLETVNTYEGAHDVHALILGRA 384

Query: 458 L 458
           +
Sbjct: 385 M 385


>gi|186475449|ref|YP_001856919.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184191908|gb|ACC69873.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 379

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 135/372 (36%), Gaps = 28/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           PG  + D+ E   +    + +    G+      + +  V       + +      A    
Sbjct: 28  PGAAQVDREEL--STVRYVAQLAELGMMGMNLPQRWGGVDASPVAIVLSLVEIAKACAST 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++     +   + +     +   + P   S                     LTE R G
Sbjct: 86  SSMIGAHYLATDSILIGGDDALRDRYLPDAASG-------------KKVGAFALTEPRAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A + ++ ++  DG Y + G K F+S+  +  F ++ A+ +   G   +   + D   
Sbjct: 133 SHPADMATRARREGDG-YRIMGVKHFISNADAAGFIVVFAKTDVDAGTRGISAFVVDRHT 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G+     +  +G R     E+   + F      L    +G    MK+L    LD A  S
Sbjct: 192 PGVDVAPAEKLMGIRGAPAHEVAL-DCFVPAANRLGAEGSGFRTAMKVLDNSRLDVAATS 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +L+ AI + + R V G  L ++  ++  IAD+   + AA  L+ + A       
Sbjct: 251 LGIAEAALSAAIGWLKERQVGGEPLSNRQGLQWTIADMKTRLEAAWLLTLQAAAKRGAGV 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +++A+ A       K +  +M   V   A++  GG G+  E  + R  R++    I  
Sbjct: 311 PFTQDASMA-------KLYASEMVAFVTDAALQMHGGYGFTREMPLERLIRDARILRIYE 363

Query: 445 GSGNAMVLDVLN 456
           GS       +  
Sbjct: 364 GSSEIQRTVIAR 375


>gi|89896546|ref|YP_520033.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
 gi|89335994|dbj|BAE85589.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 379

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 143/374 (38%), Gaps = 32/374 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+   +P    L +    +G         +          +     Y  A    G  
Sbjct: 30  KECDEKHQNPT--KLWQAFSDNGFSSLGIPEEYGGTPVDNVTLMMLVEEYGKAGGPWGW- 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
             P       +    +    K       S EY        QK  +A  L +TE   G+D 
Sbjct: 87  --PYFIMVDDILTFGSEEQKK------ISLEYF-------QKGRLAFTLLITEPGAGSDN 131

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNG 269
            ++T+   +  +G   ++GHK F+S    +D F+++ + +   V    +       +  G
Sbjct: 132 NSLTTTATRK-NGKVYINGHKTFISGAVEADYFLVMTRDLSNPVPAQAMSMWWVPKNAKG 190

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVS 326
           +  + +  KIG  + +  E+   N        + V   G ++ +K   +  L  A + + 
Sbjct: 191 ITIEPV-RKIGWHALSNSEIYLDNVEVEEKDLIGVEGKGFIQLLKNFEMERLTLAAIVLG 249

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +  +AIHYA +R   G  + +  +++  +  +AL I     + ++ A + D     
Sbjct: 250 YAEAAFEDAIHYANQRMQFGKKIGEFQLIQEKLTYMALKIENMRNMVYKGAWAKDNGLPV 309

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              +A A       K +C + A  V+ +AM+ +GG GY E+  ++R +R++    +  G+
Sbjct: 310 IIPSAMA-------KLYCAQSAFEVVDDAMQVLGGIGYTEDHRVSRLWRDTRVYRLAGGT 362

Query: 447 GNAMVLDVLNLLEK 460
              M+      L K
Sbjct: 363 DQIMIHIAGRALLK 376


>gi|224006279|ref|XP_002292100.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
           pseudonana CCMP1335]
 gi|220972619|gb|EED90951.1| precursor of hydrogenase glutaryl-coa dehydrogenase [Thalassiosira
           pseudonana CCMP1335]
          Length = 470

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 157/431 (36%), Gaps = 43/431 (9%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWDK 96
             D  L    ++F      +  L  + +L+     +   AN     +L        R ++
Sbjct: 59  DDDESLPTRKSSFGGKFEWDDALQFKDLLTDEEIAIQEAANSFCQQELQPQILLANR-NE 117

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPS 155
           V F+   H  +R+    GL        +        ++ + A  +  +       +   S
Sbjct: 118 VHFN---HNDMRKMGEMGLLGPTIPEYYGCAGLGYVSYGLIATEVERVDSSYRSAMSVQS 174

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +    +  + K + P++    +                 GLTE   G+D +++ 
Sbjct: 175 SLVMHPIYAFGSEEMKKKYLPELAQGHF-------------VGCFGLTEPNHGSDPSSME 221

Query: 216 SQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           ++ +  +  +         W  +SP++D FI+ A+  EG++  +L+     +    GL  
Sbjct: 222 TRSRYDAGTNEFILNGSKNWITNSPIADIFIVWARNEEGKIKGYLI-----EKGTPGLDA 276

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++AT  +   +       +LNV+            L++A   ++   +  
Sbjct: 277 PKIEGKGSLRASATGMIFLEDVRVPAANELNVTGLKG----PFSCLNNARFGIAWGALGA 332

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R   G  L    ++++ +AD+  +I+ A     ++           
Sbjct: 333 AEDCFHRAREYVMERKQFGAPLGANQLIQKKLADMMTEISLARLGCLQVGRQM------- 385

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+ A +  M  + K   C  +  +   A + +GG+G  +E  I RH     A +   G+ 
Sbjct: 386 EKQAASPSMVSLIKRNSCGKSLDIARMARDMLGGNGISDEYHIIRHMNNLEAVNTYEGTH 445

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 446 DIHALILGREI 456


>gi|119504471|ref|ZP_01626550.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459493|gb|EAW40589.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
          Length = 394

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 110/294 (37%), Gaps = 12/294 (4%)

Query: 178 IFSREYDPTNKA-PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +F  E   +N    + K        L+E   G+D+AA+T   Q+  D         W  +
Sbjct: 109 LFGSEQQQSNYLNAVAKGHKISAFSLSEPNAGSDVAAMTCSAQRDGDEWVLNGTKTWISN 168

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           + ++D + + A+     G   +   + +    G       + +      T  L+F+N   
Sbjct: 169 AGIADFYTVFARSSDAGGAKGISCFIVEAGTPGFEVTERIDLVAPHPLGT--LQFTNCRI 226

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G+     G       +     A  ++   R +L E + Y   R + GG L D  
Sbjct: 227 PAASLVGEEGRGFGIAMATLDVFRSTVAAAALGMARRALDETLDYTAERDIFGGKLGDLQ 286

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  I ++AL + A+  L +R A + D A      A      A + KY   + A  VI 
Sbjct: 287 LVQAKIGEMALGVDASALLVYRAAWTKDCA------AERVTREAAMAKYHATETAQQVID 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            A++  GG G  +   +   YR+  A  I  G+       +         L + 
Sbjct: 341 AAVQLHGGKGVTKGYIVESLYRDIRALRIYEGASEVQTTIIARQTINNHELGQA 394


>gi|254477398|ref|ZP_05090784.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031641|gb|EEB72476.1| acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 387

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 133/391 (34%), Gaps = 41/391 (10%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   ++       + ++++  GL+ +                      +L
Sbjct: 23  ELYPHEAEIERTGHLDM-DVIRDVQKKAMEAGLYAANMPEEVGGAGLDT-------LSWL 74

Query: 143 MAQLEAGHLMSPSVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           M + E G        +       + L  T    + +               P  K     
Sbjct: 75  MYEKELGRANYALHWTGVARPSNILLAGTEEQKEKYL-------------FPCMKGEKWD 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRV 253
            L +TE   G+D+  + +  ++  D  + L+G K F+S    +D  I           R 
Sbjct: 122 CLAMTEPDAGSDLRGMKATARQDGDD-WILNGTKHFISHADIADFAICFMATGIEDTPRG 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
               +     D    G   +     + +R      LEF +       +LG+++       
Sbjct: 181 PKKKITAFFVDKGTPGFEVRDGYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGFDVAN 240

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +     +L  +I YA  R   G  +     +   +AD+AL++ AA 
Sbjct: 241 TWLGATRLQVAATCLGRADRALQHSIDYAAERKQFGQQIGKFQGVSFKLADMALELKAAN 300

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++     FD+      + + A++ A        +M   V  EA++  GG G ++E  +
Sbjct: 301 LLTWEAGWKFDQGTVTESDMSMAKLKA-------TEMLAFVADEAIQIHGGMGLMDELPL 353

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            R +R++    I  G+       +   + + 
Sbjct: 354 ERIWRDARVERIWEGTSEIQRHIISREMLRA 384


>gi|145537093|ref|XP_001454263.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422018|emb|CAK86866.1| unnamed protein product [Paramecium tetraurelia]
          Length = 599

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 90/453 (19%), Positives = 177/453 (39%), Gaps = 27/453 (5%)

Query: 29  PLFIGMNAYSSDSLLVALIA------NFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82
           P     N +    +L   +       +  + + KE    G++  +    + +  A  N P
Sbjct: 14  PKLEASNPWLVGGILRTQLKNVLYNKDLFNEIDKEFTEFGQFC-NDVLYQHSVDAELNPP 72

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L      G   DK+     W      +   G+    ++       R         ++Y 
Sbjct: 73  KLIKQDVYGNVIDKLVLGEGWRKEKEYAAKCGIVAMAYESKHGIWNRLLQLLRL--QMYQ 130

Query: 143 MAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFS-REYDPTNKAPMQKTSVAIGL 200
                 G  ++ +  +A ++    + P        K+      + T++ P        G 
Sbjct: 131 PVSGLFGCPLAMTDGAAYLLKQWLSNPTTQCQETIKLVQQGFENLTSRDP--SKFWTSGQ 188

Query: 201 GLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV------ 253
            +TEK GG+D+   T+          Y L G+KWF S+  S+  + LA+V          
Sbjct: 189 WMTEKDGGSDVNNSTTTIAVHQGGNKYKLYGYKWFSSATDSEMTLALARVVPEKKIEDFR 248

Query: 254 ----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                 F++    +DG+ N +    +K+K+G R   T EL    +  +L+ +       +
Sbjct: 249 KYPLSLFIMRVKKDDGTLNNIKIMTMKDKMGTRQLPTAELLLQGSEAYLISEEGKGVKGI 308

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             M  +  L +A  +V  M    +  ++Y+ +R   G  LI++P  +  +    L++ A 
Sbjct: 309 SQMLNVTRLYNASSAVGSMNRLYSIVVNYSLKRKAFGKELIEKPAHQTMLTKFNLNVRAC 368

Query: 370 TALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           +   F++A  F       +  ++    RI+ P+ K +  K+    ++E +E +G  GY+E
Sbjct: 369 SLFYFKVAQLFSKIQNNAATKDDEEMFRILTPLLKLYTAKICMYWMSEGIEALGALGYME 428

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              I    R++   +I  G+ N + LD L  L+
Sbjct: 429 NSYIPLMLRDAQVLTIWEGTTNVLCLDFLRALK 461


>gi|148553936|ref|YP_001261518.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499126|gb|ABQ67380.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 386

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 132/376 (35%), Gaps = 32/376 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
            + WD     P    + R+    G+       ++    R   A  +    L   +   + 
Sbjct: 29  AQDWDARNHFP--RDVHRKLADIGVLGLTIPEAYGGFGRDIVATMVVIEELSRRSLAVSV 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +  +   +    T    ++  P+I +               +    GLTE   G 
Sbjct: 87  PYIMAACYAGMNIEECGTEAQKRELLPRIVAG-------------DLLFAYGLTEPDAGA 133

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPN 268
           D+A+I ++ ++  D +      ++   + ++D    L +          +  +L      
Sbjct: 134 DLASIKTRAERDGDILRINGAKRFCSGAGIADYVYTLVRTGPAEDRHRNLSFVLIPPDAP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDS-----A 321
           G+   +++  +G +   T +  F N    +   +       +   M +   LD      A
Sbjct: 194 GVTITKIE-SMGMKGAPTTDTSFDNVEVPIANLVGGEAAWNKGWPMLVGPGLDVEKLEVA 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            + +   R +L +A  YA  R   G  + D   ++  +AD+   I AA    +  A   +
Sbjct: 253 AIGIGIARAALDDAWAYALERRQFGKHIADFQSIQHKLADMKTQIHAARLTLYHAAWLAN 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E +  S E         + K +  ++A A   E    +G  GY+++    R+ R++    
Sbjct: 313 ERRPCSVE-------TSMAKLFATEVAKAAALECQTILGAYGYVKDFDAERYVRDALLMP 365

Query: 442 ILLGSGNAMVLDVLNL 457
           I+ GS      ++  L
Sbjct: 366 IIGGSSAVQRNNIFKL 381


>gi|318059222|ref|ZP_07977945.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318079782|ref|ZP_07987114.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 608

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 92/526 (17%), Positives = 186/526 (35%), Gaps = 69/526 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
               + A     +  EL  L E        E    A+ N P    + P      +    P
Sbjct: 29  PFAEMDAETAKSILAELARLSE----NELAESFADADRNPPV---FDP------ETNTAP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
                 ++S    +    W       +        A R  + A  E     +P+V     
Sbjct: 76  V-PETFKKSYQAFMDSEYWRLGLPEEIG----GTTAPRSLIWAYAELILGANPAVWM--- 127

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
               + P        +    E          +      + LTE   G+D+ A  ++  + 
Sbjct: 128 --YSSGPAFAGILFDE--GNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQ 183

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVPRLLED------ 264
           +DG + + G K F++S   D        +LA+ EG          FLVP+   D      
Sbjct: 184 ADGTWHIEGVKRFITSGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGEL 243

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  NG+    +++K+G +++ T E+ F +     G+L+GD +     +  +     +   
Sbjct: 244 GERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVG 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAA 369
             +++ +      A+ YA+ R                  +   P ++R++          
Sbjct: 304 TKAIATLSTGYLNALEYAKERVQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGM 363

Query: 370 TALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            AL    A   D         +  +E  A   ++ PI K +  + +   +A++++  GGS
Sbjct: 364 RALVMHTAAVQDSIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGS 423

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GS 478
           GY++E  + ++ R++  +++  G+      D     ++         +   +++ L  G 
Sbjct: 424 GYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSVAEDIKKFLAVGP 483

Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMN 523
            G+ +     +      E + L    LT+  A   +A  +Y+ G+N
Sbjct: 484 GGETLAAARGELAKAAGELEALVGAMLTQLAATQENAREIYKVGLN 529


>gi|163855548|ref|YP_001629846.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259276|emb|CAP41576.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 391

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 138/378 (36%), Gaps = 38/378 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+    P W  +   +   GL+     +++  +       +   R    A    
Sbjct: 34  PRAAAYDRDSLFP-WENIKAINA-LGLNAMFIPQAYGGMPLSYRCYLACVREVSKACAST 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G + + +  +   V    +  +     P+I                     L +TE   G
Sbjct: 92  GIIWATNFHAIKPVIQYGSEDLKSRILPRIAEGG--------------IASLVITEPSAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIM---LAQVEGRVGCFLVPRLLED 264
           +D   + +Q ++  D I    G K F+S+   +D +++    A V+          ++ +
Sbjct: 138 SDATGMKTQFREDGDEIVV-DGQKIFISNGDVADVYVVFGKWAGVDDAKASIG--AVVIE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318
               GL     ++K+G R++ T  L F           NV  GP + + +L+        
Sbjct: 195 KGAPGLAVTGTEHKMGTRASGTASLSFEQCRIPRG---NVLAGPGDGLSVLLASLNKSRP 251

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   R +  +A+ Y   R  SG  +++   ++  +AD+A ++A      + +A+
Sbjct: 252 SVAAHALGIARAAFEDAVAYINDRRQSGRRILEFQGVQFMVADLAAELAVCENWLWHVAD 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+            + A I K     +A  V  +A++  GG GY ++    R  R++ 
Sbjct: 312 LVDQGVDD------MGVEASILKLKATDLAMRVTTDAVQLHGGYGYCQDFRAERLMRDAK 365

Query: 439 ANSILLGSGNAMVLDVLN 456
              I  G+       +  
Sbjct: 366 ITQIWEGTNQIHRQLIGR 383


>gi|257055769|ref|YP_003133601.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256585641|gb|ACU96774.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 396

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 140/426 (32%), Gaps = 41/426 (9%)

Query: 48  ANFPSVVHKELELLGEYVLSCT---AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAW 103
           A  P +  +++  L E +       A  + R+ A+   P +  +   GE        P  
Sbjct: 5   APLPPLDPQDIAGLNELLTEDEKAVADSVRRLCADRIDPYIGEWFERGE-------IPDI 57

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     G+     +      +    + I    L          +      +   + 
Sbjct: 58  RGLAKELGELGVLGMHLEGYGCAGMSATQYGIACLELEATDSGLRSLVSVQGSLAMFAIW 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P++ + E                  GLTE   G+D A++ ++ ++   
Sbjct: 118 KWGSEEQKQQWLPRMAAGE-------------AIGCFGLTEPDVGSDPASMRTRARRDGS 164

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ AQ +  V  F+VP         G     +K+K+  R+
Sbjct: 165 DWVLDGRKMWITNGSVADVAVVWAQTDEGVRGFVVPT-----DTPGFSAPEIKHKLSLRA 219

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL           +L ++    GP+  +           +V   R  L  A  YA 
Sbjct: 220 SVTSELVLDGVRLPADAVLPEVTGLKGPLSCL-NEARFGIVWGAVGAARSCLQAAQSYAA 278

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    + ++ + D+ L+   A  L+F L    D    R E+         + 
Sbjct: 279 ERTQFGKPISAFQLTQQKLVDMNLEYTKALLLAFHLGKRKDAGTLRPEQ-------ISLG 331

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    + A  +   A   +G +G   E  + RH     +     G+     L +L     
Sbjct: 332 KLNNVREALQICRTARTILGANGISLEYPVIRHMTNLESVLTYEGTSEMHTL-ILGQAMT 390

Query: 461 GTNLFE 466
           G + F 
Sbjct: 391 GQSAFR 396


>gi|54027425|ref|YP_121667.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018933|dbj|BAD60303.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 608

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 97/542 (17%), Positives = 192/542 (35%), Gaps = 77/542 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       V    ++    +     G      D 
Sbjct: 46  RRLAEGPLGESFADADRNPPV---FDPETH---SVTLPESFKKSYKTLEEGGWDKFSVDE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +   +      A L L AQ  A  + +     A++     T    K WA       
Sbjct: 100 ELGGIKFPRTAYWAIAELILGAQPAA-FMYAAGAGFANIFYNNATEEQKK-WAK------ 151

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                     +      + LTE   G+D+ A  ++  K  DG + + G K F++S  SD 
Sbjct: 152 -------IAVEQGWGATMVLTEPDAGSDVGAGRTKAIKQEDGSWHIEGVKRFITSADSDD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+   D      G  NG+    +++K+G + +
Sbjct: 205 LFPNIMHLVLARPEGAGPGTKGLSLFFVPKFHFDPETGELGERNGVFVTNVEHKMGLKVS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           AT E+ F        G+L+G+++     + ++     +     +++ +      A+ YA+
Sbjct: 265 ATCEVTFGGHGVPAKGWLVGEVHNGIAQMFEVIEHARMMVGTKAIATLSTGYLNALDYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            R                  +   P ++R++A          A+    A   D   +   
Sbjct: 325 NRVQGADLTQMTDKTAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLYTAAHQDVDVAAQV 384

Query: 389 EAAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             A A + A       PI K    + A   + E+++  GGSG++++  I ++ R++  +S
Sbjct: 385 SGADADLAARVNDLLLPIVKGVGSERAYQYLTESLQTFGGSGFLQDYPIEQYIRDAKIDS 444

Query: 442 ILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  G+      D        ++G  L     Q+   ++ + G+   K    L    +  +
Sbjct: 445 LYEGTTAIQAQDFFFRKIARDRGVALAHVAGQVQKFIDAESGNGRLKAERKL--LATALE 502

Query: 496 EDKGLARFLTEKIALASSA-AALYRAGMN------DIADVFLENRFLDNCHSTHCMLHGR 548
           + + +A  LT  +  A      LY+ G+        + D+ +  + L +       L   
Sbjct: 503 DVQAMAATLTGHLMGAQQDPKELYKVGLGSVRFLLAVGDLLIGWQLLRHAEVAIAALDNG 562

Query: 549 FN 550
            +
Sbjct: 563 SD 564


>gi|146281001|ref|YP_001171154.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145569206|gb|ABP78312.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 385

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 139/387 (35%), Gaps = 35/387 (9%)

Query: 91  GERWDKV-------EFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            +R D V       +F P      +LR+    G+       +   +              
Sbjct: 22  ADRIDPVFNKEYRDKFMPKEKMAEMLRQLSEFGMVSGAVSEANGGLGLDWPTMTMLFEEV 81

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               ++    +  +   A M+  +    + + + P + S                 + +G
Sbjct: 82  AACSVDLSTPVVINSFGAQMLEKLAPAHLRERYLPGLISG-------------DSFVSVG 128

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           ++E   G+++  I ++ ++  D         W  +   SD  I   +  G      +   
Sbjct: 129 ISEPDVGSNVLEIKTRARRDGDDFIITGEKTWISNGSYSDFLICTCRT-GDDPRKGLTHF 187

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D   +    Q + +K+   S +T ++  ++       ++G+   +            +
Sbjct: 188 LLDRKEHPYEVQNI-HKMAWNSQSTAQIFLNDVRVPASNIIGNEGEALKNTLSFFERSRV 246

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +   R +L EA+ YA+ R   G ++    ++   +A++A ++ AA  L++R A 
Sbjct: 247 FVAAQGLGIGRRALEEAVRYAKERKQHGKLIAGHQLISAMLAEMATNVDAARLLTYRAAE 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                     EAA A       KY+ C+ A  +  +A++  GG+G   +  + +  RE+ 
Sbjct: 307 MIGAGIPAEMEAAMA-------KYFACEAAVTIARQAVQIHGGAGVTTDFLVEKLAREAI 359

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLF 465
              I  G+     L +   L  G N F
Sbjct: 360 IVPIPEGTTQIQQLIIGRALT-GVNAF 385


>gi|126432713|ref|YP_001068404.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126232513|gb|ABN95913.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 588

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 99/554 (17%), Positives = 179/554 (32%), Gaps = 70/554 (12%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGPGGERWD- 95
             D LL   +                   +       ++A     P           +D 
Sbjct: 10  DLDFLLFEWLRVDELTQRPRFADHSHDTFTGVLDLCEQLAERYFAPHNKKSDAHEPTFDG 69

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV   P             L     D               A      A L     +  
Sbjct: 70  EKVTVIPEVKEAWEAFAAADLLAMGMDAELGGAQLPATVAQAAFAWISAANLATSGYLML 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++A   T      +               PM     +  + L+E + G+ +A I
Sbjct: 130 TIANANLLAEFGTAEQIDRFV-------------RPMLAGRFSGTMALSETQAGSSLADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263
           T++ +   DG Y L G K ++S    +       ++LA++ G       +  F+VP+ L 
Sbjct: 177 TTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNLVLAKIPGGPPGTKGISLFVVPKYLV 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGP 308
                 G  N +    L +K+G R      L F              G+L+G+ +     
Sbjct: 237 AEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGEGVFNPGGEPGAVGYLVGEPHRGITY 296

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKR 357
           +  M     L   + +V+       +++ YAR R                 +I+   +KR
Sbjct: 297 MFRMMNEARLGVGMGAVALGYTGYLKSVKYARERPQGRPVTAKDPATPQVPIIEHADVKR 356

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +      +  A AL+   A   D   ++        I+ P+ K W  +      + A++
Sbjct: 357 MLLAQKSYVEGALALALYCARLVDLGDNQD----LLDILTPVAKSWPSQWCLEANSLAIQ 412

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             GG GY  E  + +HYR++  N I  G+     +D+L    K T         +   L 
Sbjct: 413 VHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSVDLLG--RKVTQRGGASLRAVGGALA 470

Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTE-----------KIALASSAAALYRAGMNDIA 526
           ++         ++ SL +E     + L             + A+A+S   L   G   IA
Sbjct: 471 ATVAAAGECGGEAASLAEELDARWQRLVAVTTAMFGSGDIEAAMANSVVYLEAFGHVVIA 530

Query: 527 DVFLENRFLDNCHS 540
            ++LE        +
Sbjct: 531 WMWLEQFLAAEGRT 544


>gi|124268354|ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124261129|gb|ABM96123.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 422

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 131/391 (33%), Gaps = 34/391 (8%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             A  +  Q +       R  +   H     A+ R     GL  +    ++         
Sbjct: 52  ERAVRDAAQAYCRDRLAPRVLEAFRHEKTDPAIFREMGELGLLGATLPEAYGGAGLNHVC 111

Query: 134 KIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
               AR           +MS  S      +    T    + + PK+   E+         
Sbjct: 112 YGLVAREVERVDSGYRSMMSVQSSLVMVPIHAFGTEAQKQKYLPKLARGEW--------- 162

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
                   GLTE   G+D  ++ ++ + +  G        W  +SP++D F++ A+ +G 
Sbjct: 163 ----IGCFGLTEPNHGSDPGSLATRARAVQGGYVLSGAKMWITNSPIADVFVVWAKDDGG 218

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
                +   + D    GL    +  K+G R++ T E+     F           G     
Sbjct: 219 Q----IRGFILDKGMKGLEAPAVHGKVGLRASLTGEIVMDEVFCPEENAFPEVRGLK--- 271

Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+  +I 
Sbjct: 272 GPFTCLNSARYGIAWGALGAAEDCFHRARQYVLDRPQFGRPLAANQLIQKKLADMQTEIT 331

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                  RL    DE  +       A  +  I K   C  +  +   A + +GG+G  +E
Sbjct: 332 LGLQGCLRLGRMKDEGTA-------AVEITSIMKRNSCGKSLEIARMARDMMGGNGISDE 384

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +ARH       +   G+ +   L +   +
Sbjct: 385 FGVARHLVNLEVVNTYEGTHDVHALILGRAI 415


>gi|319442749|ref|ZP_07991905.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 395

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 132/396 (33%), Gaps = 39/396 (9%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLR----------RSIHDGLHCSIWDRSFEPVVRK 130
           TP+L       E +      P      R          +    GL    +   +  +   
Sbjct: 17  TPELVELRRTVEEFAHEVVDPKMAENYRNHTFDYDIQAQMGEMGLFGLPFSEEYGGMGGD 76

Query: 131 Q-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
             A  I    L  + Q  A  L +     A  +    T    + + P + +         
Sbjct: 77  YFALGIALEELARVDQSVAITLEAGCSLGAMPIYRFGTEEQKQKYLPDLTAG-------- 128

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIML 246
                    G GLTE   G+D     +   K+ DG + ++G K F+++  +D        
Sbjct: 129 -----KSLAGFGLTEPGAGSDAGGTKTTA-KLEDGNWRINGSKQFITNSGTDITSLVTTT 182

Query: 247 AQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-V 304
           A       G   +  ++     +G   +   +K+G   + T  L + +        L   
Sbjct: 183 AVTGTREDGRKEISAIIVPTDTSGFTAEPAYDKVGWNCSDTHPLSYDDVVVPEENLLGKR 242

Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G  + + IL    +  A ++    +  + EA+ YA++R   G  + +   +   IA +
Sbjct: 243 GRGFAQFLSILAEGRVAIAALATGAAQGCVDEAVEYAKQRTSFGRPIAEYQGVSFKIARM 302

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                 A       A      +  S E       A I K      A     +A +  GG+
Sbjct: 303 EARAWTARQAWRAAALKMLAGEDFSRE-------ASIAKMVASDAAMDNARDATQVFGGA 355

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ E  +ARHYR+S    I  G+    ++ +   L
Sbjct: 356 GFMNETRVARHYRDSKILEIGEGTTEVQLMLIARSL 391


>gi|329912390|ref|ZP_08275738.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545621|gb|EGF30781.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 604

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 84/486 (17%), Positives = 173/486 (35%), Gaps = 71/486 (14%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL  +  D     +      +      +  A +        ++ +A+ +    TP   
Sbjct: 87  AAGLMAAGQDFDNGGMQLPCVVEKAGFAYFKGANVGTSSYPFLTIGNANTLMKCGTPEQI 146

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + +   + +  +  T             + L+E + G+ ++ I ++ +  +DG Y L+G+
Sbjct: 147 ETFVKPMLAGRFFGT-------------MCLSEPQAGSSLSDIVTRAEPQADGTYRLTGN 193

Query: 232 KWFLSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLED-----GSPNGLC 271
           K ++S+   +       ++LA+V G           +  F+VP+ L +     G  N + 
Sbjct: 194 KMWISAGEHELAENIVHLVLAKVPGPDGKLIPGVKGISLFIVPKKLVNADGTSGERNDVV 253

Query: 272 YQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              L +K+G R      L F              G+L+G ++     +  M     +   
Sbjct: 254 LAGLNHKMGYRGTTNCLLNFGEGKFTPQGKAGAIGYLVGTVHKGLANMFHMMNEARIGVG 313

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAAT 370
           + +V         A+ YAR R                 +I+   ++R +      +    
Sbjct: 314 LGAVMLGYTGYLHALDYARNRPQGRAPQAKDPAMPQLPIIEHTDVRRMLLAQKSYVEGGL 373

Query: 371 ALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           AL+   +   D+ ++ + E          I+ PI K W  +        A++  GG GY 
Sbjct: 374 ALALYCSKLVDDERTATPEERKRATLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYT 433

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKV 483
            E ++ + YR++  N I  G+     LD+L   +  +       L + +EQ +       
Sbjct: 434 REYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVAMQDGAALHALCAEIEQTV--ERAMA 491

Query: 484 ITILRDSISLCKEDKGLARFLTEKI--------ALASSAAALYRAGMNDIADVFLENRFL 535
           +  L    S  +        +T  +         LA+++  L   G   +A ++LE   L
Sbjct: 492 VPSLAVHASALEAAWQRIVAVTRTLHEAGDLNRTLANASLYLEAFGHAVVAWIWLEQALL 551

Query: 536 DNCHST 541
                +
Sbjct: 552 AVAKDS 557


>gi|296139046|ref|YP_003646289.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027180|gb|ADG77950.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 381

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 128/362 (35%), Gaps = 27/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASM 161
             + R     G+       +++    +       A+  L A   A           +   
Sbjct: 40  RDVWRGLGEQGVLGLEIPEAYDGGEAEDYRFNAIAQEELAAVSMAFASSVGIDFDITTPY 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  + T    + W P              +        +G+TE   G+D+A I S   + 
Sbjct: 100 IVRLGTDEAKQQWLPA-------------IAAGEAVAAIGMTEPSAGSDLAGIKSTAVRS 146

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D  + L+G K F+++    D  ++ A+         +     D S  G    R  +K+G
Sbjct: 147 GDD-WILNGSKTFITNGYTCDVAVIAAKTNPDAKARGISLFAVDCSLPGFERGRKLDKVG 205

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                T EL +S+       L+G+++     + +      + SA+ +V+  +  LAE I 
Sbjct: 206 QPEADTAELFYSDLRVPASALIGEVDRGFYHMMEKLPQERIGSAVANVAHAKQILAETIE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y R R   G  +      K  +AD+   I    A   +   +       + +AA      
Sbjct: 266 YTRERKAFGQSIGSFQHNKFLLADLVTKIEMVQAYVDQAVLAHAGGTLTAVDAAK----- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              KY   ++   V+   ++  GG GY+ E   AR + ++    I  GS   M   +   
Sbjct: 321 --VKYVSAEIQNQVLDSCVQLHGGYGYMREYRAARAWMDARVTRIWAGSSEIMKEIIGRD 378

Query: 458 LE 459
           L+
Sbjct: 379 LD 380


>gi|15807996|ref|NP_285660.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460740|gb|AAF12445.1|AE001863_70 glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
          Length = 386

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 121/369 (32%), Gaps = 34/369 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L+R+    GL        +        A+ +    L                     +
Sbjct: 46  RELMRKMGSLGLLGPTTPEQYGGAGTSYTAYGLICYELERADSGLRSAASVQGSLVMHPI 105

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K W P + S E             +    GLTE  GG+D   + ++ +K  
Sbjct: 106 NEYGSEEQKKQWLPGLASGE-------------LIGCFGLTEPDGGSDPGGMRTRARKDG 152

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W  +SP++D  ++ A+ +  V    V   +      G    ++ +K+  R
Sbjct: 153 GDYVLNGSKMWITNSPLADVAVVWAKDDEDV----VRGFIVPRDARGFSTPKIGHKMSLR 208

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T E+   +         N+  G       L  L SA   ++   +   E++      
Sbjct: 209 ASTTGEIVLEDCRIPA---ENLLPGSRGLKSPLGCLTSARSGIAWGAMGALESVLTASLE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +  + +++  +A +A   +  + L++RL N  D  +             
Sbjct: 266 YAGSRTTFGRPIAARQLVQEKLAWMATQHSLGSLLAWRLGNLKDGGQ-------MNYAQV 318

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K    ++A      A E  GG+G   E  + RH           G+ +   L V   
Sbjct: 319 SVAKGNNVRVALEGARMAREIHGGNGITTEYPVIRHMLNLETVDTYEGTHDIHTLIVGRD 378

Query: 458 LEKGTNLFE 466
           L  G N  E
Sbjct: 379 LT-GQNALE 386


>gi|156404015|ref|XP_001640203.1| predicted protein [Nematostella vectensis]
 gi|156227336|gb|EDO48140.1| predicted protein [Nematostella vectensis]
          Length = 371

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 139/388 (35%), Gaps = 45/388 (11%)

Query: 81  TPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
             +L      G R +  + E  P    L       G+  +  D      V   A+ + A 
Sbjct: 11  QEKLMPRILMGNRNEVFEREIFPEMGEL-------GVLGATIDGYGCAGVSSVAYGLIAR 63

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +  +       +   S      + +  T    + + P++   E             +  
Sbjct: 64  EVERVDSAYRSAMSVQSSLVMHPIHVFGTEEQRQKYLPRLGRGE-------------IVG 110

Query: 199 GLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             GLTE   G+D  ++ ++ +  K S+         W  +SP++D F++ A+ E      
Sbjct: 111 SFGLTEPNHGSDPGSMETKAKYNKSSNTYILNGAKTWITNSPIADIFVVWAKCEDN---- 166

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315
           ++   + +    GL   ++  K   R++AT  +   +               VE +K   
Sbjct: 167 IIRGFILEKGMAGLSAPKIDGKFSLRASATGMIVMEDVEVPAEN----LLPNVEGLKGPF 222

Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L+SA   ++   +  AE     A  Y   R   G  L    ++++ +AD+A +I+   
Sbjct: 223 SCLNSARYGIAWGALGAAEFCYETARQYVLDRVQFGRPLASNQLIQKKLADMATEISIGL 282

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               ++    DE +   +       M  + K   C  A  +  ++ + +GG+G  +E  I
Sbjct: 283 QACLQVGRLKDEGRHCPD-------MVSMIKRNSCGKALDIARQSRDMLGGNGICDEYHI 335

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            RH     + +   G+ +   L +   +
Sbjct: 336 IRHVMNLESVNTYEGTHDIHGLILGRAI 363


>gi|29833670|ref|NP_828304.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|15824131|dbj|BAB69296.1| acyl-CoA dehydrogenase [Streptomyces avermitilis]
 gi|29610794|dbj|BAC74839.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 409

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 130/395 (32%), Gaps = 45/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D++++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVSSMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDSELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------------------- 304
           +  GL   +   K G R++ T E+   N        L                       
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLENARIPGSCLLGGKEKLDERLARARERARAGGGE 254

Query: 305 -STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                              M+V   R +  EA+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 255 RVKNAAMATFEASRPAVGAMAVGTARAAYEEALEYAKTREQFGRPIIDNQGVAFQLADMR 314

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+G
Sbjct: 315 TSIDAARLLVWRASWMAVNGKPFTAA------EGSMSKLFASETAKKVTAQAVQILGGNG 368

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 369 FTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 403


>gi|333025649|ref|ZP_08453713.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332745501|gb|EGJ75942.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 608

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 92/526 (17%), Positives = 187/526 (35%), Gaps = 69/526 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
               + A+    +  EL  L E        E    A+ N P    + P      +    P
Sbjct: 29  PFAEMDADTAKSILAELARLSE----NELAESFADADRNPPV---FDP------ETNTAP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
                 ++S    +    W       +        A R  + A  E     +P+V     
Sbjct: 76  V-PETFKKSYQAFMDSEYWRLGLPEEIG----GTTAPRSLIWAYAELILGANPAVWM--- 127

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
               + P        +    E          +      + LTE   G+D+ A  ++  + 
Sbjct: 128 --YSSGPAFAGILFDE--GNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQ 183

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVPRLLED------ 264
           +DG + + G K F++S   D        +LA+ EG          FLVP+   D      
Sbjct: 184 ADGTWHIEGVKRFITSGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGEL 243

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  NG+    +++K+G +++ T E+ F +     G+L+GD +     +  +     +   
Sbjct: 244 GERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVG 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAA 369
             +++ +      A+ YA+ R                  +   P ++R++          
Sbjct: 304 TKAIATLSTGYLNALEYAKERVQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGM 363

Query: 370 TALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            AL    A   D         +  +E  A   ++ PI K +  + +   +A++++  GGS
Sbjct: 364 RALVMHTAAVQDSIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGS 423

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GS 478
           GY++E  + ++ R++  +++  G+      D     ++         +   +++ L  G 
Sbjct: 424 GYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNSVAEDIKKFLAVGP 483

Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMN 523
            G+ +     +      E + L    LT+  A   +A  +Y+ G+N
Sbjct: 484 GGETLAAARGELAKAAGELEALVGAMLTQLAATQENAREIYKVGLN 529


>gi|88855166|ref|ZP_01129831.1| FadE19 [marine actinobacterium PHSC20C1]
 gi|88815694|gb|EAR25551.1| FadE19 [marine actinobacterium PHSC20C1]
          Length = 395

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 128/365 (35%), Gaps = 33/365 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLEAGHLMSPSVTSASMV 162
           + ++ +    GL    + + F    +       A        Q  A  L +     A  +
Sbjct: 49  YEIIAQMGEMGLFGLPFPKEFGGQGKDYISLCLAIEELARVDQSIAVTLEAGIGLGAMPI 108

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    ++W P +   E                G GLTE   G+D A   +  + + 
Sbjct: 109 FKQGTDAQKQEWVPMLARGE-------------ALAGFGLTEADAGSDAAGTKTTAELV- 154

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG + ++G K F+++  S+   ++           G   +  +L      G       +K
Sbjct: 155 DGEWVINGTKQFITNSGSEITKVVTVTAVTGRRENGKPELSAILVPNGTPGFTVHPAYDK 214

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS-----VSGMRVSLA 333
           +G  ++ T  L F N        L        +   +  LD   ++         +  L 
Sbjct: 215 VGWHTSDTHPLSFDNVRVPEANLLGERGRGFANF--IETLDEGRVAFSALCTGAAQGCLE 272

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E+I YA  RHV G  +     +   IA +   + +A   ++  A           EA+ A
Sbjct: 273 ESIRYANERHVFGRSIGSNQHIAFKIARMQARVHSARLATYDAARKLVAGVPFKMEASLA 332

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +++         + A     +A +  GG G++ E  +ARHYR+S    +  G+    ++ 
Sbjct: 333 KMI-------SSEAAMDNARDATQIFGGYGFMNENPVARHYRDSKVLELGEGTTEVQMMV 385

Query: 454 VLNLL 458
           +   L
Sbjct: 386 IAREL 390


>gi|149378151|ref|ZP_01895869.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357555|gb|EDM46059.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 389

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 124/360 (34%), Gaps = 35/360 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G+  +     +         + + A  +  +       L   S      +       +
Sbjct: 58  ELGMLGATLPEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVIHPIHAFGQEAL 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K   P++ S E                  GLTE   G+D   + ++ +K+  G      
Sbjct: 118 KKRILPQLASGE-------------KVGCFGLTEPNHGSDPGNMETRAKKVDGGYLVSGS 164

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D  ++ A++EG++  F++ R        GL   +++ K   R++ T  + 
Sbjct: 165 KTWITNSPIADVCVVWAKLEGKITGFVIER----EGAKGLDTPKIEGKFSLRASETGSIF 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVS 345
               F      L+V             L+ A   +S   +  AE   +A       R   
Sbjct: 221 MDEVFVPDENKLDVEGLKG----PFSCLNKARFGISWGSLGAAEFCWHAALNYTLERKQF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ +AD+  +I      + +L    D     ++  +  +          C
Sbjct: 277 GKPLAANQLIQKKLADMQTEITLGLQGALQLGRMIDAGNYSTDAISMLKR-------NNC 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             A  +   A +  GG+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 330 GKALDIARVARDMHGGNGIADEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRGQTGIQAF 388


>gi|302520578|ref|ZP_07272920.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|302429473|gb|EFL01289.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 608

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 92/526 (17%), Positives = 187/526 (35%), Gaps = 69/526 (13%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
               + A+    +  EL  L E        E    A+ N P    + P      +    P
Sbjct: 29  PFAEMDADTAKSILAELARLSE----NELAESFADADRNPPV---FDP------ETNTAP 75

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
                 ++S    +    W       +        A R  + A  E     +P+V     
Sbjct: 76  V-PETFKKSYQAFMDSEYWRLGLPEEIG----GTTAPRSLIWAYAELILGANPAVWM--- 127

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
               + P        +    E          +      + LTE   G+D+ A  ++  + 
Sbjct: 128 --YSSGPAFAGILFDE--GNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQ 183

Query: 222 SDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVPRLLED------ 264
           +DG + + G K F++S   D        +LA+ EG          FLVP+   D      
Sbjct: 184 ADGTWHIEGVKRFITSGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGEL 243

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           G  NG+    +++K+G +++ T E+ F +     G+L+GD +     +  +     +   
Sbjct: 244 GERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVG 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAA 369
             +++ +      A+ YA+ R                  +   P ++R++          
Sbjct: 304 TKAIATLSTGYLNALEYAKERVQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGM 363

Query: 370 TALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            AL    A   D         +  +E  A   ++ PI K +  + +   +A++++  GGS
Sbjct: 364 RALVMHTAAVQDSIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGS 423

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GS 478
           GY++E  + ++ R++  +++  G+      D     ++         +   +++ L  G 
Sbjct: 424 GYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGAALNYVAEDIKKFLAVGP 483

Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMN 523
            G+ +     +      E + L    LT+  A   +A  +Y+ G+N
Sbjct: 484 GGETLAAARGELAKAAGELEALVGAMLTQLAATQENAREIYKVGLN 529


>gi|84501894|ref|ZP_01000052.1| acyl-CoA dehydrogenase 6 [Oceanicola batsensis HTCC2597]
 gi|84389889|gb|EAQ02523.1| acyl-CoA dehydrogenase 6 [Oceanicola batsensis HTCC2597]
          Length = 388

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 136/380 (35%), Gaps = 36/380 (9%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSI---HDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141
           + P  E+++++   P    L          GL   +           R     +      
Sbjct: 31  FAPLAEKYEELGHPPDADTLKSLFAKVEEFGLISGLIPEKDGGAGIDRMTYGILYEELAR 90

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           + A L    L+      A  V L+  P   + +               P+ ++       
Sbjct: 91  IWADLAIAVLIQGHAVFA--VNLLGNPAQKEAYLK-------------PLLRSERICATC 135

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           ++E   G+++  + ++  +  D I+      W  +   SD  I++  ++       +  +
Sbjct: 136 ISEPEVGSNVREVKTRADREGDKIFVTGQKLWISNGAQSDFAIVVCNLDD-----GIAMV 190

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYL 318
           + D    G    R   K+G    +T EL F          L N   G  + +K+     +
Sbjct: 191 IVDRDTGGYE-SRELRKLGLVGASTCELFFDRAETTAEHVLGNAGGGLFQTLKLFESARV 249

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              + S+   + +L  A+ YA+ R   G  +    +++  +AD+A  + AA  L  R   
Sbjct: 250 FVGLTSIGIAQAALECAVKYAQEREQHGKPIGGHQLIQGYLADMATQLDAARLLCQRGLQ 309

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D       +         + K++  +MA  + ++A++  GG+G  +E  + RH+R + 
Sbjct: 310 LLDLGVRCDTQ-------TSMAKWYATEMAVEIASKAVQIHGGNGITKEFPVERHFRNTK 362

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+     L +   L
Sbjct: 363 VMPIPDGTTEIQKLVIGRNL 382


>gi|145540409|ref|XP_001455894.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423703|emb|CAK88497.1| unnamed protein product [Paramecium tetraurelia]
          Length = 414

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 77/402 (19%), Positives = 142/402 (35%), Gaps = 39/402 (9%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           + ANY   QL       E + K  F P  +  + +    G   S +D S    V   A+ 
Sbjct: 48  QAANYAQSQLQPRIR--EAFSKEHFDPEIYKEMGKLGFLGCTISEYDLSG---VSYTAYG 102

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +    +  +       L   S      +    +  +   + PK+ S EY           
Sbjct: 103 LINKEIERVDSGYRSALSVQSSLVIHPIYQFGSKELKDKYIPKLASGEY----------- 151

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253
                 GLTE   G+D  ++ S  +K  D  Y L+G K W  +SP++D F++ A+ E   
Sbjct: 152 --VGAFGLTEPDHGSDPGSMKSHAKKK-DNYYILNGTKSWITNSPIADVFVIWAKDEKGD 208

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD---LNVSTGPVE 310
               +   + +    GL   +++ K+  RS+ T ++   N           +    GP  
Sbjct: 209 ----IRGFVLEKGMKGLSTPKIEGKLSLRSSITGQIIMDNVKVPQENMFTTVKGLKGPFS 264

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +        A  ++            YA  R      L    ++++  A++  DIA A 
Sbjct: 265 CLNN-ARFGIAWGTLGAAEFCFHHTRQYALDRKQFDANLASFQLIQKKFAEMVTDIALAQ 323

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               +++   +  +        A     + K   C +A  +  E  + +GG+G  +E  +
Sbjct: 324 QAVLQVSRLKENDQ-------LATEQVSLIKRNSCAIALKIARECRDIMGGNGISDEYQV 376

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
            RH       +   G+ +   L    +L +G    +     L
Sbjct: 377 IRHMVNLETVNTYEGASDIHAL----ILGRGITGIQAFSRAL 414


>gi|221632151|ref|YP_002521372.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221155752|gb|ACM04879.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 428

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 115/308 (37%), Gaps = 32/308 (10%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +  + +++ P++   E             +     ++E + G+D   I+++ + 
Sbjct: 97  AILHGGSEELKREYLPRLARGE-------------IIGVFAMSEPQVGSDGQGISTRAEW 143

Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
             DG + L+G K++++     D F + A  +   G    +   L      G+   R +  
Sbjct: 144 R-DGYWVLNGVKYWITWAERGDVFTVAAATDPGKGAHGGISVFLVPKGTPGMRVARRQKM 202

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI-----MSVSGMRVSL 332
           +GN       L F +         N+        ++L+  LD        +++     + 
Sbjct: 203 MGNAGIDESVLVFEDCKVPA---ENLLGELGWGFRLLMRTLDEGRVKCCSLAIGYAERAW 259

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ Y +RR   G  L D   ++  +A+ A  I  +    +  A   D  +  ++EAA 
Sbjct: 260 ELAMAYVKRRQAFGQRLADFQGIQWQLAEAATTIWLSRLAMYEAARKIDRGEFAAKEAAM 319

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +  +    V+  A++  G  GY  +  + R YR   +  I+ G+      
Sbjct: 320 A-------KLYSTEACQHVVDTAVQLFGARGYCRDYPLERIYRNYRSLRIVEGTSEIQRR 372

Query: 453 DVLNLLEK 460
            +   + K
Sbjct: 373 IIWKQMSK 380


>gi|163734530|ref|ZP_02141969.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392023|gb|EDQ16353.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 414

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 131/368 (35%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + +     GL        +  +     A+ + A  +  +       +   S      + 
Sbjct: 73  EIFKEMGDMGLLGITLPEEYGGLGGSYVAYGLVAREIERVDSGYRSMMSVQSSLVIYPIY 132

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ S E                  GLTE   G+D A + ++ +K   
Sbjct: 133 AYGTEAQRQKYLPKLCSGE-------------SIGCFGLTEPDAGSDPAGMKTRAEKTPT 179

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E   G   +   + +    GL   ++ NK+  R+
Sbjct: 180 GYKLTGSKMWISNSPIADVFVIWAKSEAHGGK--IRGFVLEKGMTGLSAPKVGNKLSLRA 237

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+             +     V+ +K     L+ A   +S   +  AE   +A R 
Sbjct: 238 SVTGEIVMDGVEV----GEDALLPNVQGLKGPFGCLNRARYGISWGVMGAAEFCWHAARQ 293

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               RH  G  L    + ++ +AD+  +IA     S ++    D A++       A  M 
Sbjct: 294 YGLDRHQFGKPLAGTQLFQKKLADMQTEIALGLQGSLQVGRLMDSAQA-------APEMI 346

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  V   + +  GG+G   E  + RH       +   G+ +   L +L  
Sbjct: 347 SIMKRNNCGKALDVARMSRDMHGGNGISGEFQVIRHMMNLETVNTYEGTHDIHAL-ILGR 405

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 406 AQTGVQAF 413


>gi|169631512|ref|YP_001705161.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|133917311|emb|CAJ77670.1| acyl-CoA dehydrogenase [Mycobacterium abscessus]
 gi|169243479|emb|CAM64507.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 614

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 98/548 (17%), Positives = 196/548 (35%), Gaps = 83/548 (15%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--------MANYNTPQLH 85
            N +     L  +   F      EL+           + LA           + N P   
Sbjct: 16  FNLFE----LFKIQQVFGGEEFPELDEDTARTFLAEMRTLAEGPLADSFAEGDRNPPV-- 69

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            + P       V    A+   ++     G        +    PV R  +    A +  ++
Sbjct: 70  -FDPETH---SVAIPEAFKKSVKAITEAGWDRVGLQEELGGTPVPRSLSW---AIQEMIL 122

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A  + S     A +   + T    K WA  +  R +  T             + LT
Sbjct: 123 GANPAVWMYSGGAGFAQIFYNIATDEQKK-WAEFVAERGWGAT-------------MVLT 168

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------ 251
           E   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG      
Sbjct: 169 EPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPGTK 228

Query: 252 RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD 301
            +  F VP+ +      E G  NG+    +++K+G + +AT EL F        G+L+G+
Sbjct: 229 GLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSFGQHGVPAKGWLVGE 288

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------IL 349
           ++     + D+     +     +++ +      A+ YA+ R                  +
Sbjct: 289 VHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTRVQGADMTQLTDKTAPRVTI 348

Query: 350 IDQPVMKRAIADIALDIAAATALSFRL-------ANSFDEAKSRSEEAAYARIMAPITKY 402
              P ++R++    +      AL           A          +      ++ P+ K 
Sbjct: 349 THHPDVRRSLMTQKVYAEGLRALYLYATTFQDAVAAKTINGVEAEDAVKLNDLLLPVIKG 408

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
              + A   + E+++  GGSG++++  I ++ R++  +S+  G+      D     +++ 
Sbjct: 409 VGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVKD 468

Query: 461 GTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKIALASSA-AAL 517
                  +   +E+ + S +G   +   R  ++   ED +G+A  +T  +  A      +
Sbjct: 469 QGKSLAFISGQIEEFVKSETGNGRLKAERALLATALEDVQGMAASMTGNLMAAQQEITQV 528

Query: 518 YRAGMNDI 525
           YR G   +
Sbjct: 529 YRVGTASV 536


>gi|126665775|ref|ZP_01736756.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126629709|gb|EBA00326.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 388

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 125/351 (35%), Gaps = 35/351 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G+  +     +         + + A  +  +       L   S      +       +
Sbjct: 58  ELGMLGATLPEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSFGQEAL 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K   PK+ S E             +    GLTE   G+D + + ++ +K+  G      
Sbjct: 118 KKRVLPKLASGE-------------LVGCFGLTEPNHGSDPSGMETRAKKVDGGYLVSGS 164

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+++G+V  F++ R        GL   +++ K   R++ T  + 
Sbjct: 165 KTWITNSPIADVFVIWAKLDGKVTGFVLER-----GAKGLDTPKIEGKFSLRASETGSIF 219

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVS 345
             + F      L+V             L+ A   +S   +  AE   +A       R   
Sbjct: 220 MDDVFCPDENKLDVDGLKG----PFSCLNKARYGISWGSLGAAEFCWHAARNYTLERKQF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ + D+  DIA     + +L    D  ++  +          + K   C
Sbjct: 276 GKPLAANQLIQKKLVDMQTDIALGLQGALQLGRLMDAGEASPDA-------ISLMKRNNC 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +  +   A +  GG+G  +E  + RH     A +   G+ +   L +  
Sbjct: 329 GKSLDIARVARDMHGGNGISDEYHVIRHVMNLEAVNTYEGTHDIHALILGR 379


>gi|215410567|ref|ZP_03419375.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298524468|ref|ZP_07011877.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298494262|gb|EFI29556.1| acyl-CoA dehydrogenase fadE13 [Mycobacterium tuberculosis
           94_M4241A]
          Length = 382

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 117/308 (37%), Gaps = 17/308 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                    V ++     +  P +      ++ +    PT             L +TE  
Sbjct: 76  MHQAGAPGGVYASLFTCGIAVPHMVASGDERLIATYVRPTL-----AGEKIGALAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V  L+ +  
Sbjct: 131 GGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVSLLVVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  
Sbjct: 190 TPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSERIGLAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + S  +  L     + R R   G  LI +  ++  +A++A  I  A   +  +       
Sbjct: 250 AYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHVVERQLAG 309

Query: 384 KSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           ++    +  +A+  A     W       V  +A++  GG GY+ E  + R +R+     I
Sbjct: 310 ETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAESEVERQHRDMRILGI 362

Query: 443 LLGSGNAM 450
             G+   +
Sbjct: 363 GGGTTEIL 370


>gi|157691425|ref|YP_001485887.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032]
 gi|157680183|gb|ABV61327.1| possible acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus
           SAFR-032]
          Length = 380

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 132/377 (35%), Gaps = 32/377 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    +D+ E  P   +L+R     G   +    S++ +        +       A
Sbjct: 20  EYIRPFANEFDETEHLPE--SLIRDMAKRGYLAAGIPSSYQGLGLDPIAYGQFTEQVGKA 77

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L++ +      +    T    + W   +              K        L+E
Sbjct: 78  CCNVRTLLTVNSLVGEAILRYGTEEQKQGWLVDL-------------AKGEKIGAFALSE 124

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D   + +  QK           KW     ++D FI++A+ +G      V   L D
Sbjct: 125 PNIGSDANHVETSYQKEGQSYVLNGKKKWISFGAIADFFIVIAR-DGEQ----VTAFLVD 179

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +  G+  +R+   + NR++   E+   +        L    G    +  L  LD    S
Sbjct: 180 RNQPGVEIERITGMMANRASYLAEITLDHVHVNESSVLGPVGGGFNHVVSLA-LDHGRYS 238

Query: 325 VSGMRVSLA-EAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   +++A EA+     Y+R+R      L    ++K  I D    + AA AL  +    
Sbjct: 239 VAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHAARALCLKAGEM 298

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +           A     I KY+  K+A  +    ++  GGSG+  E S +R YRE+  
Sbjct: 299 REANHPD------AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSRENSASRLYREAKV 352

Query: 440 NSILLGSGNAMVLDVLN 456
             I+ G+       + N
Sbjct: 353 LEIIEGTSQIQQQVIAN 369


>gi|86141700|ref|ZP_01060224.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
 gi|85831263|gb|EAQ49719.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217]
          Length = 392

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 86/415 (20%), Positives = 153/415 (36%), Gaps = 46/415 (11%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRS 123
            A +   + +  T +          W K +  P      +++     I  GL        
Sbjct: 7   EAPDYYNLDDLLTEEHKLVRSAARDWVKRDVSPIIEEAAQKAEFPKEIIKGLAEIGAFGP 66

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPK 177
           + P     A   + +   +M ++E G     S  S         +    T    K + PK
Sbjct: 67  YIPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFKFGTEVQRKKYLPK 126

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E+                 GLTE   G++   + +  +   D         W  ++
Sbjct: 127 LASGEFMG-------------CFGLTEPDHGSNPGGMVTNFKDKGDHYLLNGAKMWISNA 173

Query: 238 PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           P +D  ++ A+ E GR+   +V R +E     G       NK   R++AT EL F N   
Sbjct: 174 PFADIAVVWAKDESGRIHGLIVERGME-----GFSTPTTHNKWSLRASATGELIFDNVK- 227

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351
             +   N+          L+ LDSA   ++   +  A      A+ YA+ R   G  +  
Sbjct: 228 --IPKENLLPNKSGLGAPLMCLDSARFGIAWGAIGAAMDCYDTALRYAKEREQFGKPIGS 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + ++ +A++  +I  A  L++RL    +E K+ S + + A+           +MA  +
Sbjct: 286 FQLQQKKLAEMITEITKAQLLAWRLGALRNEDKATSAQISMAKR-------NNVEMALKI 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             EA + +GG G   E SI RH     +     G+ +  +L     +  G N F+
Sbjct: 339 AREARQILGGMGITGEYSIMRHMMNLESVVTYEGTHDIHLLITGMDIT-GLNAFK 392


>gi|239833581|ref|ZP_04681909.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821644|gb|EEQ93213.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 386

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 103/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+DI  + +  ++  D  + L+G K F+S  
Sbjct: 101 CKGEQIERYLLPAVRGERMDALAMTEPDAGSDIRGMKANARRDGDD-WVLNGTKHFISGA 159

Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G           +   L D    G   +     + +R    + LEF +
Sbjct: 160 EHADFVIVFMATGEEQSSAGTKKKITTFLVDRGTPGFTIREGYKSVSHRGYKNMILEFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A M+V   R      + YA +R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFAVMNEWLYATRITVATMAVGRARRVFDMMVDYAAQRKQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD   +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 RFQGVGFQLADSVTEIDAADWLTLAAAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V   A++  GG G +++  + R +R++    I  G+       +   L +
Sbjct: 333 VTDRAIQVHGGMGLMDDLPLERFWRDARVERIWDGTSEIQRHIIARDLLR 382


>gi|302540348|ref|ZP_07292690.1| butyryl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302457966|gb|EFL21059.1| butyryl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 408

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 46/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW--DRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+   +   + F+P        +           
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKIGLYSLDFYAQQYFDPTGLGIPMTM---EELFWGDA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +  +A  V    T      W P+++                       +E  
Sbjct: 84  GLALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPD 133

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D++A+ ++       D         W  +  ++   +++A V+  +G       +  
Sbjct: 134 AGSDVSAMRTRAVYDEAKDEWVINGTKTWATNGGIASVHVVVAAVDPGLGSKGHASFIIP 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVE 310
               GL   +   K G R++ T E+   N        L                +T   E
Sbjct: 194 PDTPGLSQGQKFKKHGIRASHTAEVVLDNVRVPGSCLLGGKEKLDERLARARERATAGGE 253

Query: 311 DMKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 254 RLKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRQQFGRPIIDNQGVAFQLADMR 313

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+  L +R +      K              ++K +  + A  V A+A++ +GG+G
Sbjct: 314 TRIDASRLLVWRASWMAVNGKPFDSA------EGSMSKLFASETAKTVTAQAVQILGGNG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 368 FTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|239609710|gb|EEQ86697.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 622

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 119/542 (21%), Positives = 201/542 (37%), Gaps = 77/542 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q    I +  Y  D+         L +  PS + ++L      VLS +  
Sbjct: 2   EPSSATTGFFQAQPTI-LPQYYEDAAFRRIISLYLPSPLPSSIDEDLSRFSRLVLSRSHM 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G     D +     W  L  R I +G+    +  +      
Sbjct: 61  AYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGWRKLQDRGIEEGMVALAYADAQSHNGG 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR-------- 181
               ++   R Y   +              S  AL+T P    D A K+  R        
Sbjct: 121 NTGTQLNN-RAYQFIKYALWT---------SSAALVTCPSAMTDGAAKMLGRHLNGPDGA 170

Query: 182 ---EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----------D----- 223
              E      +     +   G  +TE++GG+D+    + G+K+S          D     
Sbjct: 171 IFTEARKRLISRDPSFAWTSGQWMTERKGGSDVRGTETVGRKLSVEEQNASKGVDELGYP 230

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
            G + L G KWF S+  ++  IMLA+    G++  F  P R    G        NG+  Q
Sbjct: 231 LGPWQLDGFKWFSSATDANMAIMLAKTGPNGQISTFYAPLRRKVPGGAEGETELNGVRIQ 290

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 291 RLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVREISTLLNITRVHNMAGAVGGWARGLA 350

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRS 387
            +  YA+ R   G +L + P   RA+A   +       L   +A+        D   +++
Sbjct: 351 ISRAYAKVRVARGKLLTEMPAHVRALARDHVMYRGHLNLLHFVASLLGISEGQDSRLTQA 410

Query: 388 EEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IAR 432
            +A           A  R++ P+ K      +   +   ME +GG GY+E       IAR
Sbjct: 411 TQASILPTNAQQSGALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVLNIAR 470

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R+    SI  G+ + M  D++ ++  ++G  +   +   +   L  + K       + 
Sbjct: 471 IFRDICVLSIWEGTTDIMADDLVRVVKSKQGPAILVAVGQWVASALAIARKHSFQAEAEI 530

Query: 491 IS 492
           I 
Sbjct: 531 IQ 532


>gi|71065365|ref|YP_264092.1| putative glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
 gi|71038350|gb|AAZ18658.1| putative glutaryl-CoA dehydrogenase [Psychrobacter arcticus 273-4]
          Length = 394

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 131/370 (35%), Gaps = 39/370 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R+    GL     D      +   A+ + A  +  +       +   S      + 
Sbjct: 55  RNIMRQMGEMGLLGVTIDGYGCAGMSSVAYGLIAKEVEAVDSGYRSAMSVQSSLVMHPIH 114

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK+ + EY                 GLTE   G+D +++ ++ + ++ 
Sbjct: 115 AYGTEEQKEKYLPKLATGEY-------------VGCFGLTEPDSGSDPSSMLTRARAVAG 161

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP+SD F++ A+ +       +   + D    GL   +++ K   R+
Sbjct: 162 GYELTGNKMWITNSPISDVFVVWAKDDAGD----IRGFILDKGMKGLSAPKIEGKFSLRA 217

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
           + T E+     F        D+    GP         L+ A   ++   +  AE      
Sbjct: 218 SVTGEIVMDKVFVPEANAFPDIRGLKGP------FGCLNKARYGIAWGSMGAAEFCWKAS 271

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    +++  +A++  +I      + R+    DE  +       A  
Sbjct: 272 RQYTLDRKQFGRPLAATQLVQLKLANMQTEITLGLQAALRVGRLMDEDNA-------APE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +   A +  GG+G  +E  I RH     A +   G+ +   L +L
Sbjct: 325 MISLIKRNNCGKALEIARIARDMHGGNGISDEFHIIRHVMNLEAVNTYEGTHDIHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|83951727|ref|ZP_00960459.1| isovaleryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83836733|gb|EAP76030.1| isovaleryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 382

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 115/336 (34%), Gaps = 24/336 (7%)

Query: 72  ELARMANYNTPQLHAYG-----PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +L    N     +H +      P     D     P  + L       GL        +  
Sbjct: 9   DLGEDVNALREMVHRWAQDRVKPLAAEIDSKNVFP--NELWPEMGELGLLGITVPEEYGG 66

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 AH +    L   +   +    + S    + + L  +    + + P + S ++  
Sbjct: 67  AGMGYLAHVVAVEELARASASVSLSYGAHSNLCVNQIKLNGSDEQKQKYLPGLVSGQH-- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L ++E   G+D+ ++  + ++ +D         W  + P +D  ++
Sbjct: 125 -----------VGALAMSEAGAGSDVVSMKLRAERRNDHYRLNGNKYWITNGPDADTLVV 173

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A+ +   G   +   L + S  G       +K+G R + T EL F N       +LG+ 
Sbjct: 174 YAKTDPEAGSKGITAFLIEKSMTGFSTSPHFDKLGMRGSNTAELIFDNVEVPFENVLGEE 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        +  A + +  M   L E + Y   R   G  + +  +M+  IAD+
Sbjct: 234 GRGVRVLMSGLDYERVVLAGIGLGIMAACLDEIMPYLSERKQFGQPIGNFQLMQGKIADM 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              + +A A  + +A S D      ++AA   +  P
Sbjct: 294 YTAMNSARAYVYEVAKSCDRGAVTRQDAAACCLSMP 329


>gi|325675374|ref|ZP_08155058.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553345|gb|EGD23023.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 382

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 21/320 (6%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M Q  A   +  S+ +  +      P +     P+   R   PT             L +
Sbjct: 76  MHQAGASGGLFASLFTCGI----ALPHLIAAGDPRQIERWVRPTL-----AGEKIGSLAI 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE  GG+D+  + +   +  D  Y ++G K F++S +   F++ A   G  G   V  L+
Sbjct: 127 TEPGGGSDVGHLRTTAIRDGDH-YVVNGAKTFITSAVRADFVVTAVRTGGPGAGGVSLLV 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R  +K+G R++ T EL F +       L+G+ N     +    +   + 
Sbjct: 186 IEKGTPGFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFLTERIA 245

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-N 378
            A  + +  +  L   + + R R   G  LI +  ++  + ++   +  A   +  L   
Sbjct: 246 LAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTRTLVER 305

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S    +    E  +A+  A     W       V  +A++  GG GY+ E  + R YR+  
Sbjct: 306 SLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMR 358

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   +       L
Sbjct: 359 ILGIGGGTTEILTSLAAKRL 378


>gi|312140989|ref|YP_004008325.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890328|emb|CBH49646.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 380

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 21/320 (6%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M Q  A   +  S+ +  +      P +     P+   R   PT             L +
Sbjct: 74  MHQAGASGGLFASLFTCGI----ALPHLIAAGDPRQIERWVRPTL-----AGEKIGSLAI 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE  GG+D+  + +   +  D  Y ++G K F++S +   F++ A   G  G   V  L+
Sbjct: 125 TEPGGGSDVGHLRTTAIRDGDH-YVVNGAKTFITSAVRADFVVTAVRTGGPGAGGVSLLV 183

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G    R  +K+G R++ T EL F +       L+G+ N     +    +   + 
Sbjct: 184 IEKGTPGFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFLTERIA 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-N 378
            A  + +  +  L   + + R R   G  LI +  ++  + ++   +  A   +  L   
Sbjct: 244 LAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTRTLVER 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S    +    E  +A+  A     W       V  +A++  GG GY+ E  + R YR+  
Sbjct: 304 SLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYRDMR 356

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+   +       L
Sbjct: 357 ILGIGGGTTEILTSLAAKRL 376


>gi|72162398|ref|YP_290055.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71916130|gb|AAZ56032.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 391

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 96/285 (33%), Gaps = 17/285 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E       P           +TE   G+D  AI ++  K  D  + ++G K F++    +
Sbjct: 110 EQKKRYLLPTIAGERKSCFAITEPGAGSDAKAIRTRAYKDGDH-WVINGEKTFITGGNEA 168

Query: 241 DAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           D  ++ A  +   G    V   L D              +G    A+  L F N      
Sbjct: 169 DFAMVFAVTDPEKGANGGVTCFLVDREAG--WRSEPIPTMGEWGPAS--LVFDNVRVPES 224

Query: 300 GDLN-VSTGPVEDMKILIYLDSA--IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L  V  G    MK +          ++      L+ AI YA  R   G  L ++  ++
Sbjct: 225 NVLGEVGKGFELAMKWIGRGRYLLPARALGACERLLSMAIDYANTRETFGKPLAERQAIQ 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD  ++I A   L    A   D  +              I K +    A  ++   +
Sbjct: 285 WMIADSQVEIEALRLLVLHAAWQVDNGRDSRHAQ-------SIAKLYGGVKANEIVDRVL 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG GY  E  I R YRE     I  G+       +   L KG
Sbjct: 338 QIHGGMGYTRELPIERWYRELRLLRIYEGTDEIQRRTIARDLLKG 382


>gi|331673250|ref|ZP_08374018.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
 gi|331069448|gb|EGI40835.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280]
          Length = 401

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEAHVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|218290105|ref|ZP_03494267.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239814|gb|EED07003.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 584

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 82/463 (17%), Positives = 158/463 (34%), Gaps = 48/463 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL R++   GL       ++  +       +  A            +   S  +   + 
Sbjct: 59  KALYRKAGELGLIGVDLPEAYGGLELDPLSSLLVAETLGETAGFGVSINIHSGVALHPIL 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + P++ + E             V     LTE   G+D     +  ++   
Sbjct: 119 YFGDEAQRASYLPQLAAGE-------------VIASYALTEPDAGSDALHGKTSARRDEA 165

Query: 224 -GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y LSG K ++S+  ++  +++ AQ+  R     V   + D    G+   + ++K+G 
Sbjct: 166 RGCYVLSGQKQWISNARVAGVYVVFAQLADR----GVTAFVVDRDRQGVSVGKEEHKVGI 221

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T  L   +       LLG           +  L     A+ ++   R ++  A  Y
Sbjct: 222 HASPTASLILDDVEVPESALLGAPGHGHRIALSVLNLARHKMALYALGQARRAIRIAAKY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-- 396
           A+ R   G  +    +++  +  +A     A + ++R A      K R+ + A    +  
Sbjct: 282 AKERRQFGVPIASFGMIREKLGYMAARYFVARSAAYRAAGELAPGKKRALDLALRSDLEP 341

Query: 397 -----------------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                              + K    ++   +I EA++  GG GY+E+  IAR YR++  
Sbjct: 342 EEKVRGVASALSSCIAACSLNKVLATEVQAFIIDEAVQIHGGYGYMEDYEIARMYRDARI 401

Query: 440 NSILLGSGNAMVLDVLNLL-----EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
             I  G+     L  +  L      + +       S+       S    +   R   +L 
Sbjct: 402 TRIFEGTNEINRLAAVRDLLHSRAREASACSSGGLSSPSPAASLSVAAHLPAGRLRSTLE 461

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
             ++ L    T   A+  +A  L R G   +    L  R  D 
Sbjct: 462 GAEQALRAMKTGFDAVVEAA--LAREGERLVDQQALVRRLADA 502


>gi|297198029|ref|ZP_06915426.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197717577|gb|EDY61611.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 408

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 133/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDAELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLENVRVPGSCLLGGKEKLDQRLARARERAKTGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 SIDAARLLVWRASWMAINGKQFTAA------EGSMSKLFASETAKTVTAQAVQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|15890565|ref|NP_356237.1| glutaryl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
 gi|15158814|gb|AAK89022.1| glutaryl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58]
          Length = 395

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 125/368 (33%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 54  ELFRLMGRTGLLGVTLPEEYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVIHPIF 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D   + ++ +KI  
Sbjct: 114 AYGSDEQKKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPGGMKTRAEKIEG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E       +   + +    GL   ++  K+  R+
Sbjct: 161 GYRLRGSKMWISNAPIADVFVVWAKSEAHD--NEIRGFVLEKGMKGLSAPKIGGKLSLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH----- 337
           + T E+             +     V  +K     L+ A   +S   +  AE        
Sbjct: 219 SITGEIVMDGVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCWFRSRQ 274

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    + ++ +AD+  +IA     S R+    DE K        A  M 
Sbjct: 275 YGLDRKQFGKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLMDEHK-------MAPEMI 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L  
Sbjct: 328 SIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-ILGR 386

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 387 AQTGIQAF 394


>gi|311108112|ref|YP_003980965.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762801|gb|ADP18250.1| acyl-CoA dehydrogenase, N-terminal domain protein 17 [Achromobacter
           xylosoxidans A8]
          Length = 391

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 11/280 (3%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P+ +      + ++E   G+++A + ++  K  D         W  +   +D
Sbjct: 108 EQKERFLQPLLRNERRTYVSISEPDVGSNVAEVKTRADKQGDHYVLNGSKLWVTNGMFAD 167

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             I++A+         +   L + +      + + + +  RS  T    F N       L
Sbjct: 168 FGIVVARTFSDTCQGGLSLFLVEKAHTRFDARPV-DTMFVRSTGTAAYTFDNAQVPAANL 226

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG        +        L+ A+ +V   + +L  +I YAR R   G  +    +++R 
Sbjct: 227 LGQEGEGLRQILIGLNFGRLNVAMGAVGAAQCALDLSIDYARTRKQFGQPIAAYQLVQRH 286

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           I ++ +   AA AL +R A +         E         + K +  + A  V   A++ 
Sbjct: 287 IVEMTMKTQAARALGYRAARAMQAGLPARVEG-------SVAKLYATEAAHQVANHALQV 339

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GG GY  +  I R +R++    I  G+     L +   +
Sbjct: 340 HGGIGYATDYPIERIFRDTRGGMIPEGTTEIQTLIIGREI 379


>gi|261196950|ref|XP_002624878.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239596123|gb|EEQ78704.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 622

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 119/542 (21%), Positives = 203/542 (37%), Gaps = 77/542 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q    I +  Y  D+         L +  PS + ++L      VLS +  
Sbjct: 2   EPSSATTGFFQAQPTI-LPQYYEDAAFRRIISLYLPSPLPSSIDEDLSRFSRLVLSRSHM 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G     D +     W  L  R I +G+    +  +      
Sbjct: 61  AYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGWRKLQDRGIEEGMVALAYADAQSHNGG 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               ++   R Y   +              S  AL+T P    D A K+  R  +  + A
Sbjct: 121 NTGTQLNN-RAYQFIKYALWT---------SSAALVTCPSAMTDGAAKMLGRHLNGPDGA 170

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKIS----------D----- 223
              +            +   G  +TE++GG+D+    + G+K+S          D     
Sbjct: 171 IFTEARNRLISRDPSFAWTSGQWMTERKGGSDVRGTETVGRKLSVEEQNASKGVDELGYP 230

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
            G + L G KWF S+  ++  IMLA+    G++  F  P R    G        NG+  Q
Sbjct: 231 LGPWQLDGFKWFSSATDANMAIMLAKTGPNGQISTFYAPLRRKVPGGAEGETELNGVRIQ 290

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 291 RLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVREISTLLNITRVHNMAGAVGGWARGLA 350

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRS 387
            +  YA+ R   G +L + P   RA+A   +       L   +A+        D   +++
Sbjct: 351 ISRAYAKVRVARGKLLTEMPAHVRALARDHVMYRGHLNLLHFVASLLGISEGQDSRLTQA 410

Query: 388 EEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IAR 432
            +A           A  R++ P+ K      +   +   ME +GG GY+E       IAR
Sbjct: 411 TQASILPTNAQQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVLNIAR 470

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R+    SI  G+ + M  D++ ++  ++G  +   +   +   L  + K       + 
Sbjct: 471 IFRDICVLSIWEGTTDIMADDLVRVVKSKQGPAILVAVGQWVASALAIARKHSFQAEAEI 530

Query: 491 IS 492
           I 
Sbjct: 531 IQ 532


>gi|194016026|ref|ZP_03054641.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194012381|gb|EDW21948.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 380

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 132/377 (35%), Gaps = 32/377 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    +D+ E  P   +L+R     G   +    S++ +        +       A
Sbjct: 20  EHIRPFANEFDETEHLPE--SLIRDMAKRGYLAAGIPSSYQGLGLDPIAYGQFTEQVGKA 77

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L++ +      +    T    + W  ++              K        L+E
Sbjct: 78  CCNVRTLLTVNSLVGEAILRYGTEDQKQGWLVEL-------------AKGEKIGAFALSE 124

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D   + +  QK           KW     ++D FI++A+ +G      V   L D
Sbjct: 125 PNIGSDANHVETSYQKEGQSYVLNGKKKWISFGAIADFFIVIAR-DGEQ----VTAFLVD 179

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G+  +R+   + NR++   E+   +        L    G    +  L  LD    S
Sbjct: 180 RDQPGVEIERITGMMANRASYLAEITLDHVQVHEDCVLGPVGGGFNHVVSLA-LDHGRYS 238

Query: 325 VSGMRVSLA-EAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V+   +++A EA+     Y+R+R      L    ++K  I D    + AA AL  +    
Sbjct: 239 VAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHAARALCLKAGEM 298

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            +           A     I KY+  K+A  +    ++  GGSG+  E S +R YRE+  
Sbjct: 299 REANHPD------AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSRENSASRLYREAKV 352

Query: 440 NSILLGSGNAMVLDVLN 456
             I+ G+       + N
Sbjct: 353 LEIIEGTSQIQQQVIAN 369


>gi|163750079|ref|ZP_02157322.1| Acyl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161330136|gb|EDQ01118.1| Acyl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 391

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 130/371 (35%), Gaps = 41/371 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     +    +   ++ + A  +  +       +   S      +
Sbjct: 52  REIMNELGELGLLGATLPEKYACSNINYVSYGLVAREIERVDSGYRSAMSVQSSLVMYPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + PK+   E+                 GLTE   G+D  A+ ++ ++I 
Sbjct: 112 YAYGSEEQRLKYLPKLAKGEW-------------IGCFGLTEPDVGSDSGAMKTRVERID 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D FI+  ++EG +  F++     +    GL   +++ K   R
Sbjct: 159 GGYRLNGAKMWITNSPIADVFIVWGKLEGTIRGFIL-----EKGMKGLSAPKIEGKFSLR 213

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+   N       LL ++    GP         L+ A   ++   +  AE   +A
Sbjct: 214 ASITGEIVMDNVEVPESALLPNVEGLKGP------FGCLNKARYGIAWGVLGAAEFCWHA 267

Query: 340 RR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R     R      L    ++++ +AD+  +I        +     D+        A   
Sbjct: 268 ARQYTLDRIQFNRPLAANQLIQKKLADMQTEITLGLFACLQAGRLMDQ-------DALPV 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + K   C  A  +   + +  GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 321 EAISLIKRNSCGKALDIARLSRDMHGGNGISDEFHVIRHLMNLEAVNTYEGTHDIHAL-I 379

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 380 LGRAQTGIQAF 390


>gi|282863152|ref|ZP_06272212.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282562134|gb|EFB67676.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 408

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 134/394 (34%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAASEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDPTGLGIPV--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKLAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   +        L                +    E 
Sbjct: 195 ATPGLSQGQKFKKHGIRASHTAEVVLEDVRIPGSCLLGGKEKLDERLARARERAKSGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRSQFGRPIIDNQGIAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A +V A+A++ +GG+G+
Sbjct: 315 RIDAARLLVWRASWMATAGKQFTSA------EGSMSKLFASETAKSVTAQAVQILGGNGF 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|219112849|ref|XP_002186008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582858|gb|ACI65478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 470

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 70/411 (17%), Positives = 147/411 (35%), Gaps = 38/411 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
               L+L    +           A++   +L        R + V  H     ++RR    
Sbjct: 78  WQDPLQLYPLQLSDEEHAVQQATADFCQHELLPGIVQANRHEHVLDH----EMMRRMGAV 133

Query: 114 GLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           G+  S    ++        ++ + A  +  +       +   S      +      R+ +
Sbjct: 134 GMLGSTLPSAYGGAGLGYVSYGLIATEVERVDSAYRSAMSVQSSLVMYPIYAYGNERMKR 193

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P++              K ++    GLTE   G+D + + ++ ++  + +       
Sbjct: 194 TYLPEL-------------AKGNLIGCFGLTEPNHGSDPSLMETRSRRDGNEVVLNGSKN 240

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +SP +D FI+ A+ E       +   L D    GL    ++ K   R++AT  +   
Sbjct: 241 WITNSPKADVFIVWARNEAGT----IKGYLVDRGTPGLETPSIEGKFSLRASATGYIFLD 296

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347
           +    L  +L+V+            L+ A   ++   +  AEA       Y   R   G 
Sbjct: 297 DVRVPLENELSVAGLKG----PFSCLNHARYGIAWGVLGAAEACFHQARSYTLERAQFGA 352

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD+  +IA   A   ++    +  +++ E       M  + K   C  
Sbjct: 353 PLAANQLVQKKLADMLTEIALGRAGCLQVGRLMESGRAQPE-------MISLLKRNNCGK 405

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  +   A + +GG+G  +E  + RH     A +   G+ +   L +   +
Sbjct: 406 ALDIARVARDMLGGNGVSDEYHVIRHVLNLEAVNTYEGTHDIHALILGRAV 456


>gi|317126242|ref|YP_004100354.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590330|gb|ADU49627.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 380

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 129/358 (36%), Gaps = 24/358 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA--LMTTPR 169
           H+ L    WD        +   K R A  + +   E          +  +VA  L   P 
Sbjct: 29  HEFLINGDWDLK---TRLELEAKGRQAGFWALDVPEEDGGQGMDEFAMCLVAEELYKHPA 85

Query: 170 VHKDWAPK-----IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
           + +          + S E       P+           TE   G+D A I +   +  D 
Sbjct: 86  MFEFGGSPEPALYLCSEEQKKRFYYPVINGERKSAYAFTEPDAGSDFARIKTSAVRDGDE 145

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + ++G K F+S    +D  I+ A      G   V   L D    G    R    +G+  
Sbjct: 146 -WVINGRKTFISHVDRADFLILFASTNPGAGSRGVTCFLVDKDTPGFEVSRPIPTMGDAW 204

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               EL F N       +LG+++      +       +  A   +   + SL  AI +A+
Sbjct: 205 TP-YELTFENCRVPHENVLGEVDKGFAIADHQLTHGRVRIAAYQLGMAQRSLDLAIEWAK 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +  +  ++  IAD  +++ AA  L ++ A ++D+   R+E  A         
Sbjct: 264 QRTTWGKPIATRQAIQWMIADSYVELEAARLLVYKAAMTYDKEGGRNEAFA--------A 315

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  +MA  V    ++  GG GY +E  I   YR+     I  G+       +   L
Sbjct: 316 KLYATEMAQRVTDRCLQIFGGLGYTKELPIQSFYRQIRVWRIGHGTAEVHRWMIARSL 373


>gi|302531198|ref|ZP_07283540.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302440093|gb|EFL11909.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 614

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 90/494 (18%), Positives = 175/494 (35%), Gaps = 82/494 (16%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           + +    E    A+ N P    Y P   +   V    ++    +  +             
Sbjct: 48  LATGPLAESYADADRNPPV---YDP---KTFSVTIPDSFKKSYKALVDGEWWRLGLTNEL 101

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                    +  AA L L A       ++     A +V    T      WA  +  R + 
Sbjct: 102 GGFGLPPTVQWAAAELILGANAPLFMYLAGP-NFAMIVDKNGTEEQK-HWAQLMIDRGWG 159

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
            T             + LTE   G+D+ A  ++  K  DG + + G K F++S  +D   
Sbjct: 160 AT-------------MVLTEPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSAENDMVE 206

Query: 243 ---FIMLAQVEG----------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRS 283
               ++LA+ EG           +  FLVP+   D      G  NG     +++K+G + 
Sbjct: 207 NIMHLVLARPEGPGIETKPGTKGLSLFLVPKFHFDSKTGELGERNGAFVTNIEHKMGIKV 266

Query: 284 NATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           + T EL F        G+LLG+++     +  +     +     +++ +      A+ YA
Sbjct: 267 STTCELTFGQHGTPAKGWLLGEVHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYA 326

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSR 386
           + R                  +   P ++R++           A+    A+  D+     
Sbjct: 327 KERVQGADLPNMLNKTAPRVTITHHPDVRRSLMLQKAYAEGLRAIYLYTASFQDQLWTGE 386

Query: 387 SEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +EA+         ++ PI K    + A   + ++++ +GGSG++++  I ++ R++  +
Sbjct: 387 GDEASLKLAHSVNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQDYPIEQYIRDAKID 446

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
           S+  G+     LD               F  + +D G +   V   +       + + G 
Sbjct: 447 SLYEGTTAIQSLDF-------------FFRKIVRDKGQALAYVAGEIT---KFIESEAGN 490

Query: 501 ARFLTEKIALASSA 514
            R   E+ AL   A
Sbjct: 491 GRLKNER-ALLKQA 503


>gi|240170897|ref|ZP_04749556.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 386

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 122/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L   +   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 41  DLREHAKKMGLFGYAIPQEWGGLGLDLPQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W               P+    V     LTE   G++ A + ++  + S 
Sbjct: 101 GFGTDEQKARWL-------------GPIASGDVVASFALTEPGAGSNPAGLRTKAVRDSG 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P++  F++ A+          +   L      G+       K+G  
Sbjct: 148 NWVISGQKRFITNAPVAGLFVVFARTRPADEQGAGIAVFLVPADTAGVEVGAKDAKMGQE 207

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F++        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 208 GAWTADVNFNDVRVGAEALIGGTEDIGYRAALTSLARGRVHIAAIAVGTAQRALDESVAY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  + +  +++  +AD    + A  AL    A  +   + R       RI   
Sbjct: 268 ATTATQGGTPIGNFQLVQAMLADQQTGVLAGRALVRDAARLWVSGEDR-------RIAPS 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+    + R YR+     +  G+     L V + L
Sbjct: 321 AAKLFCTEMAGKVADLAVQIHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIVGSNL 380

Query: 459 EKGTN 463
            +   
Sbjct: 381 VRAAQ 385


>gi|311109069|ref|YP_003981922.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763758|gb|ADP19207.1| acyl-CoA dehydrogenase, N-terminal domain protein 24 [Achromobacter
           xylosoxidans A8]
          Length = 389

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 141/385 (36%), Gaps = 33/385 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYL 142
               P  ++W++ +  PA H + ++    G         F  +    +++I    A   +
Sbjct: 19  REINPYLDQWEEEQIFPA-HEVFKKLGRAGFLGVNKPTEFGGMGLDYSYEIAFCEAIGSV 77

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A      +   +  +   +A      V + +               P         LG+
Sbjct: 78  RAGGVGMAIAVQTDMATPALARFGNDAVREQFL-------------RPSIAGDYVACLGV 124

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFL 257
           +E   G+D+A++ +  +K  D         W  ++  +D   +LA               
Sbjct: 125 SETGAGSDVASLKTTARKDGDDYVISGSKMWITNATQADWMCLLANTSDDKPHRNKSLIC 184

Query: 258 VPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL 315
           +P   E+G P  G+   ++K K+G  S+ T ++ F          +     G    M+  
Sbjct: 185 LPLKQENGKPVPGVTMNKIK-KVGMWSSDTAQVFFDEVRVPQRYRIGEEGMGFTYQMRQF 243

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A   V+ +   + + I Y R+R V G  L+D   +   +A++  ++    A+ 
Sbjct: 244 QEERLSGATRRVTALGDVINDTIDYTRQRLVFGKPLLDNQAVHFRLAELKTEVEMLRAMV 303

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +R A    +    +E       +A + K    ++   V    ++  GG G+  E +++R 
Sbjct: 304 YRAARVHMDGGDMTE-------LASMAKLKAGRLCREVTDSCLQYWGGMGFTWENAVSRA 356

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           +R+    SI  G+   M+  +   +
Sbjct: 357 WRDLRLISIGGGADEIMLTIICKHM 381


>gi|310822088|ref|YP_003954446.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|208973121|tpe|CAQ34915.1| TPA: putative L-prolyl-S-PCP Dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395160|gb|ADO72619.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 379

 Score =  219 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 117/361 (32%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SAS 160
             L +R    G            +        R         ++ G + S          
Sbjct: 37  RTLWQRCGEFGFLGLPVPERHGGLGLDTLTTARVMEALGRGCVDTGLVFSAGAHLFACVM 96

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +      R    + P++ S E+   N              ++E   G+D+ A+ ++  +
Sbjct: 97  PILEAGDDRQKTQYLPRLCSGEWVGAN-------------AISEPEAGSDVFALKTRAVR 143

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D      G  +  + P +D F++ A      G   +   L +    GL   R   K+G
Sbjct: 144 DGDSYVLDGGKSYVTNGPDADVFLVYAVTHPTSGYLGLSAFLIEKKTPGLSVGRPFEKMG 203

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIH 337
             ++    +            L          K  +  + A      V  M   L + + 
Sbjct: 204 LSTSPIAPIYLEGCRVPASAMLGAEGQGAPLFKRSMQWERACLFAAYVGVMERVLEQTVD 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +AR+R      +     +   +AD+ L + ++  L +R     D  +  S E + A++  
Sbjct: 264 FARQRKQFKRAIGKNQAISHRLADMKLRLESSRLLLYRACWLMDRGQEASMEVSLAKLAI 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A     + ++  GG GY+ E  I R  R++  ++I  G+       + + 
Sbjct: 324 -------SEAAVQCGLDTLQIHGGMGYVTETGIERVLRDAIPSTIFSGTSEIQRDIIASN 376

Query: 458 L 458
           L
Sbjct: 377 L 377


>gi|86136856|ref|ZP_01055434.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826180|gb|EAQ46377.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 387

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 124/370 (33%), Gaps = 40/370 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-- 161
             +  +++  GL+ +                      +LM + E G        +     
Sbjct: 43  KDIQAKAMEAGLYAANMPEEVGGAGLDT-------LSWLMYEKELGRANYALHWTGVARP 95

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +               P  K      L +TE   G+D+  + +  +
Sbjct: 96  SNILLAGTDEQKEKYL-------------YPCMKGEKWDCLAMTEPDAGSDLRGMKATAR 142

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQR 274
           K  D  + L+G K F+S    +D  I           R     +     D    G   + 
Sbjct: 143 KDGDD-WILNGTKHFISHADIADFAICFMATGVEDTPRGPKKKITAFFVDKGAPGFAVRD 201

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               + +R      LEF +       +LG+++              L  A   +     +
Sbjct: 202 GYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGFDVANTWLGATRLQVAATCLGRAERA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  ++ YA  R   G  +     +   +AD+AL++ AA  L++     FD+      + +
Sbjct: 262 LQHSVEYAAERKQFGQQIGKFQGVSFKLADMALELKAANLLTWEAGWKFDQGTVTESDMS 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A        +M   V  EA++  GG G ++E  + R +R++    I  G+     
Sbjct: 322 MAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQR 374

Query: 452 LDVLNLLEKG 461
             +   + + 
Sbjct: 375 HIISREMLRA 384


>gi|114563237|ref|YP_750750.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114334530|gb|ABI71912.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 601

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 93/482 (19%), Positives = 177/482 (36%), Gaps = 60/482 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P     +      G+  +  D     +         AA    +A          +
Sbjct: 71  KVHIIPELKTAIDAVNESGIGSATADYDLGGMQLPPIIASAAASFLSVAGGVGMGYNMLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++    +P +   W               PM++      + +TE   G+ +  + 
Sbjct: 131 TANANLLQAHGSPELINTWVK-------------PMREGRFMGTMAMTEPGSGSALGDLI 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL-- 262
           ++  K  DG Y ++G+K ++S    D       ++LA+++G       +  F+VP+ L  
Sbjct: 178 TKAVKSDDGTYRITGNKIYISGGDHDLSDNIVHLVLARIQGAPKGVKGISLFVVPKFLLN 237

Query: 263 EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILI 316
           EDGS    N +    L +K+G R+  +  L F     + G+L+G+ +     +  M    
Sbjct: 238 EDGSVGEDNEVALAGLFHKMGGRAQTSTALSFGEKNGSIGYLVGEEHCGLKYMFHMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALD 365
            +                ++ YA+ R                 +I+   +KR +      
Sbjct: 298 RIMVGTSGAVLAVAGYQYSVDYAKNRPQGRLPSCKDPQSPMVNIIEHADVKRMLLAQKAY 357

Query: 366 IAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
              A AL        D+ ++      R         + PI K W  +  P   + A++ +
Sbjct: 358 AEGAMALVLYGTQLSDDERTADTSEQREHAHTLLDFLTPIIKTWPSEYGPKANSYAIQVM 417

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLFEQLFSTLE 473
           GG GYI E  +   YR++  N I  G+     LD++      N ++       ++  T+E
Sbjct: 418 GGHGYINEHPVEMFYRDNRLNPIHEGTTGIQSLDLITRKVPMNKMQGYKATLHEITKTIE 477

Query: 474 QDLG-SSGKKVITILRDSIS-LCKEDKGLARFLTEK---IALASSAAALYRAGMNDIADV 528
           Q     S  +    L +++  L    + +   +  K   +ALA+S   L   G   IA +
Sbjct: 478 QAKQYDSLSEYTQKLSEAVETLTLTTEAVLNGMATKNIDLALANSVKYLELFGHVIIAWL 537

Query: 529 FL 530
           +L
Sbjct: 538 WL 539


>gi|330752485|emb|CBL87434.1| acyl-CoA dehydrogenase [uncultured Flavobacteria bacterium]
          Length = 599

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 145/444 (32%), Gaps = 34/444 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            LL      GL  S      + +       +        A   A    + +      +  
Sbjct: 69  KLLEEVGELGLLGSSVPEELDGLGLDFKSTMLITESMGGAHSFAVSFSAHTGIGTLPILY 128

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KIS 222
                  K + P + +               +     LTE   G+D  +  +  +  +  
Sbjct: 129 YGNDAQKKKYIPGLATG-------------QLKGCYCLTEPGSGSDANSGKTSAKLNETG 175

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W  +   +D  I+ A+++       +   + +    G+     + K+G +
Sbjct: 176 THYVLNGQKMWITNGGFADVMIVFAKIDDDE---NLSAFILEKGFEGITMNPEEKKMGIK 232

Query: 283 SNATVELEFSNTFGFLLGDL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
            ++T +L F++    +   L N   G    + IL    +    + +   + ++ E++ YA
Sbjct: 233 GSSTRQLFFNDVEVPVENLLYNRGEGFKIAVNILNIGRIKLGGVVIGSCKDAINESVKYA 292

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL------------ANSFDEAKSRS 387
             R   G  +     ++  + ++A+   A     +R             A   D+ ++  
Sbjct: 293 NTREQFGRPISKYGAIRHKLGEMAIQTYALETAVYRATQNIDDAIADLAAGGMDKGEATL 352

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +  A       + K    ++   V+ EA++  GG GY  E      YR++  N I  G+ 
Sbjct: 353 KGIAAFAPECAMMKILGSEVTDYVVDEAVQVHGGMGYSAETRAEHAYRDARINRIFEGTN 412

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR-FLTE 506
               +  ++++ K     E    T    + +    +         + ++  G  R F   
Sbjct: 413 EINRMLTVDMILKKAMKGELDLMTPAMAVANELTGIPEFGDAPSDIYEKHLGYIRNFKKA 472

Query: 507 KIALASSAAALYRAGMNDIADVFL 530
            + +A SAA      +    ++ +
Sbjct: 473 TLMVAGSAAQKLMMSLAKEQEILM 496


>gi|301059305|ref|ZP_07200232.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300446534|gb|EFK10372.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 401

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 142/369 (38%), Gaps = 26/369 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +++   G     +              +     +  A    G  +  +   A +V 
Sbjct: 40  REIYQKAGELGFIGLDYSEDVGGGGLGVMENVLVIEAFCKADSGMGMAIHLAYLPAKIVK 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   K +   + + ++                +  TE   G+D+  + +  ++ +D
Sbjct: 100 KFGTPPQRKKFLTPLVAGKW-------------VSAVSFTEPDHGSDLTRMETTLEEEAD 146

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNG-----LCYQRLK 276
           G   L+G K F ++   +D FI+LAQ +   G    +  +L +   N      +    + 
Sbjct: 147 GF-VLNGTKIFTTNGKYADFFIVLAQEDPNAGPGKGMSTILVERDSNSWLGGNMEINEIT 205

Query: 277 NKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G R  ++ E+ F +       +LG+       V +      ++    ++     +  
Sbjct: 206 GKMGLRMTSSSEVVFHDLKIPRENILGERGRGLMNVLEFLDESRIEIGAQALGNCEGAFL 265

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A+ +AR R      +ID   +   +A +   I +   L++  A   D+  +R   +   
Sbjct: 266 KALAHARERKQFNRPIIDFQGVGHKLARMWSRIQSLKWLNYYGAWLCDKGPARLSRS--I 323

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            ++  + K+   + A A+I +A+   GG GY  ++ + R YR++    +  G+    + +
Sbjct: 324 PLITSVVKHHVPETAKAIIDDAITVFGGYGYFLDQEVERRYRDNRIVEVYEGTVEVQLNN 383

Query: 454 VLNLLEKGT 462
           ++ +L K  
Sbjct: 384 IVRVLGKMP 392


>gi|226361794|ref|YP_002779572.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240279|dbj|BAH50627.1| putative glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 397

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 129/392 (32%), Gaps = 35/392 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A + TP +  +   G+        P    L +     G+     +           + + 
Sbjct: 38  AEHVTPHVADWFEAGDL-------PGARELAKEFGKLGVLGMHLEGYGCGGSSAVHYGLA 90

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              L          +      +   +    +      W P + + E             +
Sbjct: 91  CLELEACDSGIRSLVSVQGSLAMFSIWNNGSEEQKNQWLPGMAAGE-------------I 137

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
               GLTE   G+D A+++++ ++            W  +  ++D  ++ A  +  +  F
Sbjct: 138 IGCFGLTEPDVGSDPASMSTRAKRDGSDWILNGRKMWITNGSIADVAVVWAATDDGIRGF 197

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           +VP         G     +K+K+  R++ T EL   N        L  + G    +  L 
Sbjct: 198 IVPT-----DTPGFSAPLIKHKMSLRASVTSELVLDNVRLPESAMLPDARGVRAPLSSLS 252

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                    ++   R +   A+ Y++ R   G  +    + +  +AD+A+++     LS 
Sbjct: 253 EARYGIVWGAMGAARSAWEAALQYSKDRAQFGRPIGGFQLTQAKLADMAVELHKGQLLSL 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L    D A  R ++ ++        K    + A  +   A   +GG+G   E  + RH 
Sbjct: 313 HLGRLKDTAGLRPDQVSFG-------KLNNTREAIEICRTARTILGGNGISLEFPVIRHM 365

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
               +     G+   M   VL     G N F 
Sbjct: 366 VNLESVLTYEGTPE-MHQLVLGQAFTGENAFR 396


>gi|239834531|ref|ZP_04682859.1| Butyryl-CoA dehydrogenase [Ochrobactrum intermedium LMG 3301]
 gi|239822594|gb|EEQ94163.1| Butyryl-CoA dehydrogenase [Ochrobactrum intermedium LMG 3301]
          Length = 387

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 122/363 (33%), Gaps = 18/363 (4%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E        +      G+  +    ++          +RA  +   A       ++    
Sbjct: 39  ETSRFVDRQIATLGEAGMMGANLPEAYGGSGISAPALLRAVSIVAAACGSTASALTAHYL 98

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   + +  T    ++W PK  S E                   LTE   G+D A + ++
Sbjct: 99  ATDSILIGGTEAQKQEWLPKAASGE-------------ALAAFALTEPTAGSDPADMKTR 145

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++I  G +      +  +  ++D  ++ A  +       +   +      G      + 
Sbjct: 146 ARRIEGGWHLKGTKCFISNGGVADFIVVYAVTDPEKAHRGISAFILPKDTPGFEAGPAEK 205

Query: 278 KIGNRSNATVELEFSNT--FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            +G +      L    T     LLG+          +     ++ A   +     ++  A
Sbjct: 206 TMGLKGGHVFTLNLDCTLPEHALLGEEGKGFRTAMQVLDNGRIEVAAQCLGLAGAAMNAA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I YA+ R + G  L ++  ++  IAD+AL   +A  LS   +   D A  +    + A  
Sbjct: 266 IAYAKERIIGGMPLSERQGIRWMIADMALAYHSALLLSQEASRQRDLAHHQGGRFSLA-- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A + K    + A  +   A++  GG GY  +  I R  R+     I  GS     + + 
Sbjct: 324 -ASMAKLGASEAAGKIADIALQIHGGYGYTRDFPIERINRDLRIMRIYEGSSEIQRMIIS 382

Query: 456 NLL 458
             +
Sbjct: 383 GNM 385


>gi|118431552|ref|NP_148093.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
 gi|116062877|dbj|BAA80682.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1]
          Length = 389

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 132/378 (34%), Gaps = 32/378 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D     P   +LLR     G         +          + A      A    
Sbjct: 32  PKAREIDATNTVPE--SLLREGAEMGFFALRVPEEYGGPGLSLLESVVAIEELSRASSGY 89

Query: 149 GHLMSPS-VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +   S       +    +  V + +  ++                       LTE   
Sbjct: 90  GLIAVVSGSMVVHPILKFASEEVKEKYLSRL--------------AKGAIGAFALTEPCC 135

Query: 208 GTDIAAI-TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLED 264
           GTD+A++  +  ++   G Y +SG K F+++   +D FI+ A+          +  L+ D
Sbjct: 136 GTDVASLHMTTAKREG-GEYVVSGQKIFITNSAYADFFIVAARTGKLEERHRGISLLIVD 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            S + +   +L+  +G R + T  + F++       L+G        V        + ++
Sbjct: 195 RS-DCVEVSKLE-MMGYRGSGTSIVYFNDCRVPSENLIGQEGGGFKLVMHTLNEGRISTS 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+ +   A+ +A  R   G  +I+  ++   IA++ + +  +  L +  A+  D
Sbjct: 253 ASGLGVMQAAFDAALKHAGERESMGRPIIEHQMVSSMIAEMLVRLETSRLLVYTAAHKLD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                          A + K         ++  AM+ +GG GY  E  + R+YR+     
Sbjct: 313 TNSPD------YIKYASLAKLHTATAGVDLVRMAMQVLGGIGYSRESDVERYYRDIKMIE 366

Query: 442 ILLGSGNAMVLDVLNLLE 459
           I  G+     + +   L+
Sbjct: 367 IGDGTNEVQRMVLTKFLQ 384


>gi|333028591|ref|ZP_08456655.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332748443|gb|EGJ78884.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 409

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 131/396 (33%), Gaps = 47/396 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS--FEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   G++   +     F+P        +           
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKLGIYSLDFYAQQFFDPTGLGIPMTM---EELFWGDA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G  +  +  +A  V    T      W P+++                       +E  
Sbjct: 84  GIGLSIVGTGLAAVGVLANGTEEQIGTWVPQMYGT----------PDDVKVAAFCSSEPD 133

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+A + ++       D         W  +  +++  +++A V+  +G       +  
Sbjct: 134 AGSDVAGMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPGLGSKGHASFIVP 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPV 309
               GL   +   K G R++ T E+   +                               
Sbjct: 194 PGTKGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDQRLARARERAKAQGG 253

Query: 310 EDMKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           E +K                M+V   R +  EA+ YA+ R   G  +ID   +   +AD+
Sbjct: 254 ERIKNAAMATFEASRPAVGAMAVGTARAAYEEALEYAKTRTQFGRPVIDNQGIAFQLADM 313

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L +R +      K  +           ++K +  + A  V A+A++  GG+
Sbjct: 314 RTRIDAARLLVWRASWMATTGKPFTSA------EGSMSKLFASETAKQVTAQAIQIFGGN 367

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  E  + R +R+S   +I  G+     L +   L
Sbjct: 368 GYTREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 403


>gi|18313385|ref|NP_560052.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
 gi|18160916|gb|AAL64234.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2]
          Length = 380

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 144/396 (36%), Gaps = 29/396 (7%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           ELAR       +     P   + D+  ++P     +R +   G+        +       
Sbjct: 9   ELARKTAREFAE-KYVDPIVRKMDRENYYP--RETIRDAGELGILTPTVPAEYGGGGGDL 65

Query: 132 AHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
              +               L+ +  +  A  V    + R  ++  PKI S E        
Sbjct: 66  RTAVVVLEELGRISGGFSLLVEALGILFADAVNKHASKRQKEEILPKIASGE-------- 117

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                      L+E   G+D AAI +   +            W  +   +D +++ A+  
Sbjct: 118 -----KIGAFALSEPCCGSDAAAIQTAAVRRGGEWVINGHKMWITNGHYADYYLVAARTG 172

Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVST 306
            R      +   L   S N +   +++  +G R   T E++F+N       ++G++N   
Sbjct: 173 PREARHKAITVFLLKRS-NCVETSQIE-VMGVRGTGTAEVKFNNCAASDDDIVGEVNGGW 230

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             + D   +     + ++V   R +  EA+ +AR R +    LI+    +  +A++   I
Sbjct: 231 KVIVDTLNVGRTAISGVTVGIARGAFEEALKWARNRELFDRKLIEFQNTQFELAEMYASI 290

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L++  A  +D             IM+ + K    ++A  V   A++  GG GY +
Sbjct: 291 ETARTLAYYAAYLYDINSPG------FLIMSHVAKLQTARIAVDVTRRAVQIEGGFGYSK 344

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           E      YR++    I  G+   M   +  L+EKG 
Sbjct: 345 ESKAEMFYRDAKILEIGEGTNEVMKYVIYKLIEKGQ 380


>gi|84687137|ref|ZP_01015019.1| butyryl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664908|gb|EAQ11390.1| butyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 387

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 142/393 (36%), Gaps = 31/393 (7%)

Query: 70  AQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            QE AR  A    P+L        +  + +  P     L R    G         +  + 
Sbjct: 12  LQEAARRFAQEQLPEL-------AKELEAKCEPVPAEWLARYAEMGFLGINVAEKYGGLG 64

Query: 129 RKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                 +     +  ++   A  +    V     +       + +   P++ + E     
Sbjct: 65  LGNLEALLVVEEFAKISSAVAFPVFESCVGPVRAIEHFAQDSLKERVIPRVCAGE----- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                     + + ++E   G+ +  + ++     D +      +W      +D +++  
Sbjct: 120 --------AVVAVSMSEPDAGSALTDLKTRAVIDGDKVILNGTKRWCSGGGHADGYVVYC 171

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           ++    G   +  +  +    GL +   +  +G R   + +L F +    L   +  + G
Sbjct: 172 RMSDDPGAKGIGAVYVEKGTPGLSFGPQEELMGFRGVPSSDLNFDDVELPLDAVIVPAGG 231

Query: 308 PVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M+   L    +A MS+     +L +   Y + R   G  +++   ++  +A++ + 
Sbjct: 232 FKKLMEAFDLERCGNATMSLGQASGALDDVQAYVQERKQFGRPIVEFQGVQIKLAEMKIR 291

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A  L  R A++ ++      E+        I K +  +++  V   A++ +GG GY 
Sbjct: 292 VEGARLLIHRAASNAEDGMPSILES-------SIAKCYANEISREVTGTAVQLMGGYGYS 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +E  + R  R+S    I  G+ +   +++ + +
Sbjct: 345 KEYPMERRLRDSWGWGIAGGAIDIQKVNIASAM 377


>gi|254487803|ref|ZP_05101008.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044672|gb|EEB85310.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 407

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 128/359 (35%), Gaps = 34/359 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHK 172
           GL        +  +          AR           +MS  S      +    +    K
Sbjct: 75  GLLGVTTPEEYGGLGGNYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGSEAQRK 134

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S ++                 GLTE   G+D A + ++  K + G   +    
Sbjct: 135 KYLPKLASGDF-------------IGCFGLTEPDAGSDPAGMKTRAIKTATGYKLIGSKM 181

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++P++D F++ A+ E   G   +   + +    GL   ++ NK+  R++ T E+   
Sbjct: 182 WISNAPIADVFVVWAKSEEHGGK--IRGFILEKGMKGLTAPKVGNKLSLRASITGEIVMD 239

Query: 293 NTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSG 346
           N         +     V+ +K     L+ A   +S   +  AE   +A R     R    
Sbjct: 240 NVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFN 295

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    + ++ +AD+  +IA     S ++    D AK+       A  M  I K   C 
Sbjct: 296 KPLAQTQLFQKKLADMQTEIALGLQASLQVGRLMDAAKA-------APEMISIVKRNNCG 348

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A  +   + +  GG+G   E  + RH       +   G+ +   L +L   + G   F
Sbjct: 349 KALDIARMSRDMHGGNGISGEYQVIRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|145353314|ref|XP_001420963.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145357449|ref|XP_001422931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581199|gb|ABO99256.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583175|gb|ABP01290.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 429

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 76/394 (19%), Positives = 137/394 (34%), Gaps = 23/394 (5%)

Query: 85  HAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
               P    WD+ +  P   + A     I   +    W +   P   +  H      L +
Sbjct: 44  RDIAPYVHEWDETKTIPPEVYRATYAAGILPAVVGKPWPKDLVPECEEPEHFDYFHELIV 103

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIG 199
             +                  L           P +    S +      AP  +    I 
Sbjct: 104 FDEFARCGSGG---------VLWGLLEGIHIGLPPVLNFGSEDLRRRVGAPCLRGEGIIC 154

Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           L +TE   G+D+A I  + +    G  Y ++G K ++++ +   +  +A   G  G   +
Sbjct: 155 LAITEPYAGSDVANIRCEAKLDPSGKFYRVTGEKKWITNGIWADYFTVAVRTGGPGMGGI 214

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             L+ + S  G+  +R+ + +G  ++ T  + F +       L+G  N     +      
Sbjct: 215 SLLVIERSMPGVDCRRM-DCMGVWASGTTFITFEDVKVPVENLIGKENEGFKYIMHNFNH 273

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                 I +    RV   E+  YA RR   G  LI+ PV++  +A++   + A   L   
Sbjct: 274 ERWGFVIQANRFARVCYEESFKYAHRRRTFGKKLIEHPVIRHKLAEMIRQVEATHYLLET 333

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIAR 432
           +    +         A A I   + K    K+      EA +  GG+ Y+       I R
Sbjct: 334 ITYQMNTMTKEESSKALAGI-TALAKVQSTKVFEFCAREAAQVFGGASYVRGGQGEKIER 392

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            YR+  A +I  GS   M+   +    K   + +
Sbjct: 393 LYRDVRAYAIPGGSEEIMLDLGVRQAMKQWQVAQ 426


>gi|320035887|gb|EFW17827.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 547

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/392 (20%), Positives = 143/392 (36%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +D S      K     +    + +   
Sbjct: 163 PHVFEWDEAKKVPDHIYKQMGERGYLAGLLGVGYDPSLSKNTVKSVPPEKWDLFHEVIVT 222

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P +      K  ++E        +      I L +TE
Sbjct: 223 DELSRCASGGVVWNLIGGFGIGCPPLL-----KFGNKEVVKRVVPGILSGDKRICLAITE 277

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G   V  LL 
Sbjct: 278 PDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMNGVSVLLI 337

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 338 EREFEGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENRGFKVIMTNFNHERIGI 396

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I S+   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 397 VIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 456

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            N  D   S     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 457 QNYEDMEASLRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYSRGGQGGKIERL 511

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    +    F
Sbjct: 512 YRDVRAYAIPGGSEEIMLDLSMRQSLRVHKAF 543


>gi|303321273|ref|XP_003070631.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240110327|gb|EER28486.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 551

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/392 (20%), Positives = 143/392 (36%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +D S      K     +    + +   
Sbjct: 167 PHVFEWDEAKKVPDHIYKQMGERGYLAGLLGVGYDPSLSKNTVKSVPPEKWDLFHEVIVT 226

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P +      K  ++E        +      I L +TE
Sbjct: 227 DELSRCASGGVVWNLIGGFGIGCPPLL-----KFGNKEVVKRVVPGILSGDKRICLAITE 281

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G   V  LL 
Sbjct: 282 PDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMNGVSVLLI 341

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 342 EREFEGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENRGFKVIMTNFNHERIGI 400

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I S+   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 401 VIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 460

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            N  D   S     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 461 QNYEDMEASLRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYSRGGQGGKIERL 515

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    +    F
Sbjct: 516 YRDVRAYAIPGGSEEIMLDLSMRQSLRVHKAF 547


>gi|119180400|ref|XP_001241675.1| hypothetical protein CIMG_08838 [Coccidioides immitis RS]
          Length = 547

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/392 (20%), Positives = 143/392 (36%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P +    +  R    GL    +D S      K     +    + +   
Sbjct: 163 PHVFEWDEAKKVPDYIYKQMGERGYLAGLLGVGYDPSLSKNTVKSVPPEKWDLFHEVIVT 222

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P +      K  ++E        +      I L +TE
Sbjct: 223 DELSRCASGGVVWNLIGGFGIGCPPLL-----KFGNKEVVKRVVPGILSGDKRICLAITE 277

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ +T + +   DG  Y ++G K ++++ +   +  +A   G  G   V  LL 
Sbjct: 278 PDAGSDVSNLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGGPGMNGVSVLLI 337

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 338 EREFEGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENRGFKVIMTNFNHERIGI 396

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I S+   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 397 VIQSLRFARVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 456

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            N  D   S     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 457 QNYEDMEASLRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYSRGGQGGKIERL 511

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    +    F
Sbjct: 512 YRDVRAYAIPGGSEEIMLDLSMRQSLRVHKAF 543


>gi|86141033|ref|ZP_01059592.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
 gi|85832975|gb|EAQ51424.1| Acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217]
          Length = 454

 Score =  219 bits (558), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 133/368 (36%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF    H ++ +     L    +     P        I A  L  +    +     
Sbjct: 105 WNRAEFP---HEIIPKFAELNLAGIAYKGYGCPGQSFLLEGILAMELARVDVSISTFFGV 161

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + L  +    ++W PK             MQK       GLTE   G+  A 
Sbjct: 162 HSGLAMGSIYLCGSEEQKQEWLPK-------------MQKFEKIGAFGLTEPEVGSGAAG 208

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  +K+ D        KW  ++  SD  I+ A+ E           +      G   
Sbjct: 209 GLGTSCKKVGDEWILNGEKKWIGNATFSDITIIWARDEDSGSVKG---FIVRKENPGFHA 265

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           +++K+K+  R+     +  ++        L  +    +  K+  +     A  +V   R 
Sbjct: 266 EKMKDKMALRTVQNALITLTDCRVPESDRLQNANSFKDTAKVLQMTRASVAWQAVGCARG 325

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y ++R   G  +    +++  + ++  ++ A   L FRL+   D  +   E A
Sbjct: 326 AYEAALKYTKKREQFGRPIASFQLIQNHLVEMISNLTAMQTLCFRLSEMQDGGQLTDEHA 385

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C      V++ A E +GG+G + E  +AR   ++ A     G+    
Sbjct: 386 SLA-------KVFCSMRTRDVVSRAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEIN 438

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 439 SLIVGRAI 446


>gi|302529097|ref|ZP_07281439.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302437992|gb|EFL09808.1| acyl CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score =  219 bits (558), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 69/421 (16%), Positives = 134/421 (31%), Gaps = 40/421 (9%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARM----ANYNTPQLHAYGPGGERWDKVEFH 100
           +   + P +  ++   LG+          A +    A    P +  +   GE        
Sbjct: 2   SATKSLPPLDPRDPAGLGDLFTEDEKAIAAAVRRVCAERIDPYVGDWFERGEL------- 54

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L +     G+     +      +    + +    L          +      +  
Sbjct: 55  PDVRGLAKDLGTLGVLGMHLEGYGCAGMSATEYGLACLELEASDSGIRSLVSVQGSLAMF 114

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + W P + + E                  GLTE   G+D A++ ++ ++
Sbjct: 115 AIWKWGSEEQKQQWLPSMAAGE-------------AIGCFGLTEPDAGSDPASMRTRARR 161

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++D  ++ AQ +  V  F+VP         G     +K+K+ 
Sbjct: 162 DGDDWVLDGRKMWITNGSVADVAVVWAQTDKGVRGFVVPT-----DTPGFSAPEIKHKLS 216

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++ T EL           +L ++    GP+  +           SV   R  L  A+ 
Sbjct: 217 LRASITSELVLDGVRLPADAVLPEVTGLKGPLSCL-NEARFGIVWGSVGAARSCLQAAMS 275

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +    + ++ + D+ L+   A  L+  L    D    R E+        
Sbjct: 276 YAEDRTQFGKPISAFQLTQQKLVDMTLEYTKALLLAIHLGRRKDAGVLRPEQ-------V 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K    + A  +   A   +G +G   E  + RH     +     G+     L V   
Sbjct: 329 SLGKLNNVREAIEICRTARTILGANGISLEYPVIRHMNNLESVLTYEGTVEMHTLVVGQA 388

Query: 458 L 458
           +
Sbjct: 389 I 389


>gi|289583609|ref|YP_003482019.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289533107|gb|ADD07457.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 384

 Score =  219 bits (558), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 144/400 (36%), Gaps = 36/400 (9%)

Query: 72  ELARMANYNTPQLHAY-----GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           EL    + +  ++  +      P  E  +     P    ++      G +   +   ++ 
Sbjct: 6   ELTEAHHEHREEVRQFCKAEIDPYVETHESEGTFP--FDIVETVGEAGFNGVQYGTEYDG 63

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           +     ++ I    L    +  AG            +         ++W   I + ++ P
Sbjct: 64  LGLDYRSYAITIEELARSWKFLAGTASICGSLVGYPIHEFGAEWQREEWLGSICAGDWIP 123

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         L LTE   G+D AA+ +  ++  D  Y + GHK + ++     F++
Sbjct: 124 -------------ALSLTEPDAGSDAAALETTAERDGDE-YVIDGHKVWTTNGEVADFVV 169

Query: 246 LAQVEGR--VGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           +A   G    G   V  +        +G    R    +   +    E+++         +
Sbjct: 170 VAARTGDEDDGAGGVSLIGVPNPQERDGFDVVRDIPSMEGEAAIESEIKYDGLRVPAENV 229

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       V +   +  + +A   V   + +   +  +A  R   G  + +   +   
Sbjct: 230 IGEEGRGFRYVMEGLDIGRIGTAAQGVGVAQAAFEASRDFADEREQFGQPIREFQGVSFK 289

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A ++ A+  L+ + A   D+ +  ++EAA A+  A         +A     EA++ 
Sbjct: 290 LADMATEVQASRLLTLQAAAKRDQGERVTQEAAMAKAKA-------TDVAMDAATEAVQI 342

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G  GY ++R I R+ R +    I  G+     L V N L
Sbjct: 343 HGSRGYSKDRPIERYMRVAKGMQIYEGTNEINRLVVANQL 382


>gi|241554211|ref|YP_002979424.1| Butyryl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240863517|gb|ACS61179.1| Butyryl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 386

 Score =  219 bits (558), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 97/290 (33%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++       L+G K F+S  
Sbjct: 101 CEGEQRERYLLPAVRGEKIDALAITEPDAGSDMRGMKCAARRDGSDF-VLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G       + + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILGGYDSVSHRGYHNSTLSFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R      + YA  R   G  + 
Sbjct: 220 CRIPASQVLGEVHRGFEIANKWLYGTRLTVAATCVGRARRVFDMTLPYAAERKQFGKPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D   S       A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAADWLTLAAAWRLDAGLS-------ADRQIASAKLYSSEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIFGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|254389567|ref|ZP_05004793.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294816838|ref|ZP_06775480.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326445820|ref|ZP_08220554.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197703280|gb|EDY49092.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294321653|gb|EFG03788.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 395

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 137/403 (33%), Gaps = 32/403 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   +E    AN  T  L     G    D+     A     R+    GL       
Sbjct: 2   DFDLTPEQREF--CANLETFALKELNDGLVERDREGVFAA--ENWRKCADIGLLGLPVPV 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIF 179
               +       + A         + G + S         S +    +P   + + P + 
Sbjct: 58  EHGGLAADATTMMTALESLGYGCRDNGLIFSLHAHLWAGTSPIVRFGSPGQRERYLPGMC 117

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
           +               V  G  +TE   G+D  A+ +   +   G Y L+G K F+S+ P
Sbjct: 118 AG-------------DVIAGHAMTEPGSGSDAFAMATTVTRTG-GTYVLNGSKVFVSNAP 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296
           ++D  ++ A    + G   V   L D    GL   R  +K+G R++   E+         
Sbjct: 164 IADVLLVFAVDPAKRGFAGVSAFLVDRDTPGLTVSRPVSKMGLRTSPMGEVHLDGCEVAA 223

Query: 297 -FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LLG                       ++  MR  L   + +AR R   G  +     +
Sbjct: 224 DALLGPEGAGMAVFNWTMERERSFILASALGTMRRDLERCVDHARTRGQFGRPIGSFQAV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              I D+ + + AA  L  RLA   D  +    EAA A       K +  +       +A
Sbjct: 284 SHRIVDMRMRLDAARLLLHRLAWQIDNDRPTKVEAALA-------KVFVSEAFVQSGLDA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG GY  E  + R  R++ A+ I  G+         + +
Sbjct: 337 VQIHGGYGYTTEYELERDLRDALASRIYSGTSEIQRNLAAHHM 379


>gi|291333465|gb|ADD93166.1| putative acyl CoA dehydrogenase C terminal domain protein
           [uncultured archaeon MedDCM-OCT-S05-C724]
          Length = 388

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 117/338 (34%), Gaps = 30/338 (8%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ +    L          +      +   +    T      + P              M
Sbjct: 78  AYGVICQELERGDSAIRSCVSVQGSLTMYPIHAFGTEEQKNKYLPG-------------M 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K  +    GLTE   G+D   + ++     D         W  +  ++D  I+ A+++G
Sbjct: 125 AKGELIGCFGLTEPDHGSDPGGMETKAIDDGDSYVLNGAKMWITNGTIADLAIVWAKLDG 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
           ++  F+V     +    G     +K K   R++ T EL F +       +L ++    GP
Sbjct: 185 KIRGFIV-----EKGDKGFSAPEMKGKHSLRASITSELVFQDCRIPKDRILPEVQGLKGP 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  +        A  S+         ++ YA+ R +    +    +++  +A +  +I  
Sbjct: 240 LSCL-NQARFGIAWGSLGAAMGCFHSSVDYAKSRIMFKKPIASFQLVQNKLAWMLREITK 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L++ L  + D+ ++  E       M  + K     +A  +   + +  G +G + E 
Sbjct: 299 GQLLAYHLGRAKDKGEATPE-------MISLGKMNNVDIALQISRTSRDIHGANGILNEY 351

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            I RH     +     G+ +   L +L     G   FE
Sbjct: 352 PIMRHMANLESVYTYEGTHDIHNL-ILGRWITGLQAFE 388


>gi|121607236|ref|YP_995043.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121551876|gb|ABM56025.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 386

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 146/376 (38%), Gaps = 30/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
               RWD+    P    L    +  G    +  +++                     ++ 
Sbjct: 33  RDVRRWDRDGEFPE--TLHHEMVAAGFPAMMVPQAYGGSASSMQDCAIVYEEISRPSVDL 90

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  ++     + +++   +  + +++ P++ S              +V +   LTE   G
Sbjct: 91  GTRLALLAWGSMILSDFASEEIKQEFLPRVASG-------------AVKLSFSLTEPGSG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQVEGRV-GCFLVPRLLEDG 265
           +D A++ ++ +   DG + L+G K F S   +  +  I+ A+ +        +   L   
Sbjct: 138 SDAASLQTRARADGDG-WVLNGQKLFSSGADALNNHIIVAARTDPDAPRHKGISLFLVPN 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
           +  GL  +RL + +G +     E+ F        +L+G++N     +        +  A 
Sbjct: 197 TSPGLTIRRL-DTVGRKIVGLCEIFFDAVRIPRRYLIGEVNHGWHYITRHLERERITLAA 255

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   R +LA+AI YA  R   G  + D  V+   +AD+A ++ AA  +    A  +D 
Sbjct: 256 NYLGSARSALADAIAYACERRQFGRPIGDFQVIAHMLADMATEVEAARWMVAMAAWRYDM 315

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +++A+ A       K +  +M      + M+ + G GY  +  + R++R++   ++
Sbjct: 316 QLPCAKQASMA-------KLFVSEMLVRATTQGMQILAGHGYTTDHDMQRYWRDARNCTV 368

Query: 443 LLGSGNAMVLDVLNLL 458
             G+       +   L
Sbjct: 369 GGGTSQIQRGLIAREL 384


>gi|15807914|ref|NP_285573.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6460683|gb|AAF12388.1|AE001863_13 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 637

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/513 (18%), Positives = 183/513 (35%), Gaps = 69/513 (13%)

Query: 73  LARMANYNTPQLHAYGPGGERWD-KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
            AR A+ N P            D KV+  P     +      G   +  D     +    
Sbjct: 94  HARAADVNEP---------HVVDGKVKLVPEAQQAVEAFRDAGFFSAHHDEELGGLQLPW 144

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
                    +  A          ++ +A++     +P   + +   +    +  T     
Sbjct: 145 VVMQAVQANFQAANPGTASYTFLTIGNANLQREFGSPEQQEKYLLPLLEGRWFGT----- 199

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIML 246
                   + L+E + G+ +A IT+      DG Y ++G K ++S    +       ++L
Sbjct: 200 --------MALSEPQAGSGLADITTTATLRDDGTYSITGTKMWISGGEHELTENIVHLVL 251

Query: 247 AQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293
           A+++G   G   +   L            G  N +    L +K+G+R      L F    
Sbjct: 252 ARIKGAPAGVKGISLFLVPRYRINPDGSVGESNHVVLAGLNHKLGHRGTTNTLLNFGEGG 311

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---- 348
            T G L+G+       +  M     +   + +V         ++ YAR R          
Sbjct: 312 ETIGELVGEPGRGLAQMFHMMNEARIGVGMGAVMSGYAGYLASLEYARDRRQGRHASNRD 371

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIM 396
                  +I+   +KR +    + +    AL    A+  D+  +  EE     A    ++
Sbjct: 372 PQAESVAIIEHADVKRMLLRQKVFVEGGLALGLYAASLVDDLNTGPEEEKADTALLLDLL 431

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  K +   +++A++ +GG+GY  +  +  +YR++  N I  G+      D+L 
Sbjct: 432 TPIVKSWPSKYSQEALSDAIQVMGGAGYTRDTPVEMYYRDNRLNPIHEGTEGIQGNDLLG 491

Query: 457 --LLEKGTNLFEQLFSTLEQDLGSSGKK-----VITILRDSISLCKED----KGLARFLT 505
             L +      + L   +  DL ++ ++     + T L+++I  C        G A  L 
Sbjct: 492 RKLTQANGRGLQVLLGKMGADLKAAEQEGELSDIRTALQEAIGQCAAALGSLLGRAAELG 551

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
             + LA++ AAL   G   +  ++L        
Sbjct: 552 PDLFLANANAALDMVGHTVVGWMWLRQGLAAAR 584


>gi|307946508|ref|ZP_07661843.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307770172|gb|EFO29398.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 386

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +  Q  +   G + +SG K F+S  
Sbjct: 101 CEGEQREKYLLPAVRGEKMDALAITEPDAGSDVRGMKCQAVRDG-GDWVISGSKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D FI+          R     +   L D    G   +   N + ++      L F  
Sbjct: 160 EHADFFIVFIATGVDETPRGPKKRITCFLVDRGTPGFEVRDGYNSVSHKGYKNYILYFDK 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      L  A MSV   R     A++YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFQVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGEAIA 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 RFQGVSFQIADMITEIDAADWLTLAGAWRLDQGLP-------ANREIASAKLYATEMLAN 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   + +
Sbjct: 333 VTDTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDIFR 382


>gi|256422338|ref|YP_003122991.1| glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
 gi|256037246|gb|ACU60790.1| Glutaryl-CoA dehydrogenase [Chitinophaga pinensis DSM 2588]
          Length = 454

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 125/358 (34%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL +     +  S ++             I    +  +    A      S  +   + 
Sbjct: 113 FQLLPKLAALDICGSTYEGYGGIQSSFLMEGIITMEIARVDCSMATFFGVQSGLAMGSIY 172

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           L+ +    K+W P              MQ+       GLTE   G+  A  +T+  ++  
Sbjct: 173 LLGSEEQKKEWLPG-------------MQRLEKIGAFGLTEPEVGSGAAGGLTTTAKRDG 219

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D        KW  ++  +D  ++ A+             L      G   +++ +K+  R
Sbjct: 220 DTWILNGQKKWIGNATFADVLVIWARDVDDNEVKG---FLVKKDTPGFSVEKMHDKMALR 276

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +   +        L  +    +  K+  +     A ++V   R +   A+ Y +
Sbjct: 277 IVQNGVITLKDCVVEEKDRLQHANSFKDTAKVLRMTRAGVAWLAVGCARGAYENALAYTQ 336

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +    +++  + ++  ++ A   + +RL+   DE +   E        A I 
Sbjct: 337 KRKQFGRPIGSFQLIQNHLVEMLSNLTAMQTMVYRLSELQDEGRLEDE-------HASIA 389

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +C      +++ A E +GG+G + E ++AR   ++ A     G+     L V   +
Sbjct: 390 KVFCSLRTRDIVSRAREVMGGNGILLEYNVARFVADAEAIYSYEGTKEINSLIVGRAI 447


>gi|262194893|ref|YP_003266102.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262078240|gb|ACY14209.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 388

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 128/359 (35%), Gaps = 25/359 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMV 162
             +  ++   G         +           +  +    A  + G  ++  S   A  +
Sbjct: 41  RDIYTKAGEQGYLLMWAPERYGGADIDDMRYEQILQEENYAFGDPGLCLTLHSRVVAPYI 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    + W P   S                 + + ++E   G+D+A + ++ +   
Sbjct: 101 GKHGDDEQKRRWLPAAASG-------------DKILAVAMSEPSAGSDLAGMQTRAEDRG 147

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D  + L+G K ++S+ +    +++A          +   + +    G    R  +K+G  
Sbjct: 148 DH-WLLNGSKTYISNGLLADLVIVAARTRSDSRHAMGLFVVEAEMEGFKRGRRLHKLGLD 206

Query: 283 SNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +  T E+ F +        L         +     +  L  AI S+S  +V+    + Y 
Sbjct: 207 AQDTAEMFFEDVVVPKANVLGDPTQGFRYLAQALAVERLQIAIGSISHAQVAFGLTLEYI 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +      +  +A +  +I A  +         +E    +E A+ A+++A  
Sbjct: 267 KDRKAFGRPVGTFQDPRFRMARMRTEIDAVQSYVDACVMLANEGGLTAEVASGAKMLA-- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 ++   VI + ++  GG+GY+EE  I+R YR++    I  G+   M   +   L
Sbjct: 325 -----TELEGRVIDDCLQLHGGAGYMEEYRISRMYRDARVTRIFGGANEIMSEIIGRGL 378


>gi|114765756|ref|ZP_01444851.1| glutaryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114541863|gb|EAU44899.1| glutaryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 406

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/434 (17%), Positives = 148/434 (34%), Gaps = 46/434 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            +  L       P +   +LE   E ++  +A+  A+  +   P++         + +  
Sbjct: 11  DNPALAGFSWEDPFLFDAQLEED-ERMIGESARAFAQ--DKLLPRVE------HAYMEEH 61

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
             P   A +      GL        +  +          AR           +MS  S  
Sbjct: 62  TDPEIFAEMG---AQGLLGVTVPEQYGGIGAGYVSYGLVAREVERVDSGYRSMMSVQSSL 118

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ S E+                 GLTE   G+D A + ++
Sbjct: 119 VMYPIYAYGSEAQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTR 165

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             K   G        W  ++P++D F++ A+ E   G   +   + +    GL   ++  
Sbjct: 166 AIKTEGGYRLKGAKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPKIGG 223

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI 336
           K+  R++ T E+   +         +     VE +K     L+ A   ++   +  AEA 
Sbjct: 224 KLSLRASITGEIVMDDVEV----GEDALLPNVEGLKGPFGCLNRARYGIAWGVMGAAEAC 279

Query: 337 H-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R      L    + ++ +AD+  +IA     + R+    D A++      
Sbjct: 280 WMQARQYGLDRKQFDKPLAGTQLFQKKLADMQTEIALGLQAALRVGRLMDSAQA------ 333

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  M  + K   C  A  +   A +  GG+G   E  + RH       +   G+ +   
Sbjct: 334 -APEMISLIKRNNCGKALDIARMARDMHGGNGIQIEYGVMRHAANLETVNTYEGTHDVHA 392

Query: 452 LDVLNLLEKGTNLF 465
           L +L   + G   F
Sbjct: 393 L-ILGRAQTGIQAF 405


>gi|126724791|ref|ZP_01740634.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126705955|gb|EBA05045.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 414

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 127/365 (34%), Gaps = 34/365 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +  +     A+ + A  +  +       +   S      +    
Sbjct: 76  REMGDMGLLGITVPEQYGGIGAGYVAYGLVAQEVERVDSGYRSMMSVQSSLVMYPIYAYG 135

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +      +  K+ S EY                 GLTE   G+D   + +  +K ++G  
Sbjct: 136 SEEQRMKYLTKLASGEY-------------IGCFGLTEPDAGSDPGGMKTVAKKTANGYV 182

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++ A+ E   G   +   + D    GL   ++ NK+  R++ T
Sbjct: 183 LNGSKMWISNAPIADVFVVWAKSEEHGGK--IRGFILDKGMTGLSAPKIGNKLSLRASIT 240

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
            E+             +     VE +K     L+ A   +S   +  AE   ++ R    
Sbjct: 241 GEIVMDGVEV----GEDALLPNVEGLKGPFGCLNRARYGISWGVMGAAEFCWHSARQYGL 296

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    + ++ +AD+  +I+     S R+    DE  +       A  M  I 
Sbjct: 297 DRKQFGKPLAGMQLYQKKLADMQTEISLGLQASLRVGRLMDEGNA-------APEMISII 349

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   + +  GG+G   E  I RH       +   G+ +   L +L   + 
Sbjct: 350 KRNNCGKALDIARMSRDMHGGNGISAEFQIMRHMCNLETVNTYEGAHDVHAL-ILGRAQT 408

Query: 461 GTNLF 465
           G   F
Sbjct: 409 GIQAF 413


>gi|302517740|ref|ZP_07270082.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
 gi|318061930|ref|ZP_07980651.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318078438|ref|ZP_07985770.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
 gi|302426635|gb|EFK98450.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78]
          Length = 409

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 131/396 (33%), Gaps = 47/396 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS--FEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   G++   +     F+P        +           
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKLGVYSLDFYAQQFFDPTGLGIPMTM---EELFWGDA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G  +  +  +A  V    T      W P+++                       +E  
Sbjct: 84  GIGLSIVGTGLAAVGVLANGTEEQIGTWVPQMYGT----------PDDVKVAAFCSSEPD 133

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+A + ++       D         W  +  +++  +++A V+  +G       +  
Sbjct: 134 AGSDVAGMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDPGLGSKGHASFIVP 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPV 309
               GL   +   K G R++ T E+   +                               
Sbjct: 194 PGTKGLSQGQKFKKHGIRASHTAEVVLEDVRVPGHCLLGGKEKLDQRLARARERAKAQGG 253

Query: 310 EDMKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           E +K                M+V   R +  EA+ YA+ R   G  +ID   +   +AD+
Sbjct: 254 ERIKNAAMATFEASRPAVGAMAVGTARAAYEEALEYAKTRTQFGRPVIDNQGIAFQLADM 313

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L +R +      K  +           ++K +  + A  V A+A++  GG+
Sbjct: 314 RTRIDAARLLVWRASWMATTGKPFTSA------EGSMSKLFASETAKQVTAQAIQIFGGN 367

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  E  + R +R+S   +I  G+     L +   L
Sbjct: 368 GYTREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 403


>gi|84498482|ref|ZP_00997252.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84381225|gb|EAP97109.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 386

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 125/364 (34%), Gaps = 32/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + R     GL             +     ++       A +     +S    +A  V  
Sbjct: 47  EIFRTLGRAGLLSLPHPEEHGGGGQPYEVYLQVVEEIASAWMSVAVGVSVHSLTAYPVTT 106

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD- 223
             TP       P + S +                   L+E   G+D+ ++T++  +  D 
Sbjct: 107 FGTPEQQTALLPGMLSGDQ-------------LGAYALSEPLAGSDVGSMTTRATRDGDN 153

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W   +  +D +   A+     G   +   +     + + +   + K+G  
Sbjct: 154 AAYAIKGRKAWISHAGHADYYTTFARTSDDGG-RGLSCFIVPAGSDAMTFGAPEKKMGLH 212

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYA-- 339
            +   E+ +         + N      + M I L  LD+  + ++     LA++   A  
Sbjct: 213 CDTVREVIYDGVPVE---EANRIGDEGQGMAIALSALDAGRLGIASGATGLAQSALDAAA 269

Query: 340 ---RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
              + R   G  +     +   IAD+   ++ A A     A   D  +  S+EAA A+++
Sbjct: 270 AYAKERQQFGRAIAANQGLAFMIADMEAAVSGARAAYLYAARLKDAGRPFSKEAAVAKLL 329

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A          A  V  +A++ +GG+GY ++  + R +RE+    I  G+     L +  
Sbjct: 330 A-------TDAAMKVTTDAVQVLGGAGYTQDFPVERMFREAKVTQIFEGTNQIQRLVISR 382

Query: 457 LLEK 460
            + +
Sbjct: 383 HILR 386


>gi|113868119|ref|YP_726608.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
 gi|113526895|emb|CAJ93240.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha
           H16]
          Length = 388

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 140/378 (37%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+W+  E  PA H + ++    G         F  +    +++I  A    +  + A
Sbjct: 23  PHVEKWEADEIFPA-HEVFKKLGSAGYLGVNKPVEFGGMGLDYSYEI--AFCEAIGGISA 79

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +      + ++   M TP + +       S E   T   P       + LG++E   G
Sbjct: 80  GGVG----MAIAVQTDMATPALARFG-----SDELRETFLKPTVAGDFVVCLGVSEAGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLE 263
           +D+A++ +  +K            W  +   +D   +LA               +P    
Sbjct: 131 SDVASLKTTARKDGSDYVINGSKMWITNGLQADWMCLLANTSDGDIHRNKSLICLPLREG 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
                G+   ++K K+G  S+ T ++ F +        +     G    M+      L  
Sbjct: 191 GKLRPGITMNKIK-KVGMWSSDTAQVFFDDVRVPQRYRIGDEGMGFTYQMRQFQEERLSG 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V+ +  ++ E I Y R+R   G  ++D   +   +A++  ++    ++ +R A   
Sbjct: 250 ATRRVTALTNAINETIEYTRQRKAFGRSILDNQAVHFRLAELKTEVELLRSVIYRAAQVH 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 +E       +A + K    ++   V    ++  GG G+  +  ++R +R+    
Sbjct: 310 MSGGDMTE-------LASMAKLKAGRLCREVTDSCLQYWGGMGFTWDNRVSRAWRDLRLI 362

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+   M+  +   +
Sbjct: 363 SIGGGADEIMLTIICKHM 380


>gi|325286599|ref|YP_004262389.1| Glutaryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
 gi|324322053|gb|ADY29518.1| Glutaryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489]
          Length = 392

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 41/365 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +    T
Sbjct: 57  GLAEIGAFGPYIPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYTYGT 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ S E+                 GLTE   G++   + ++ + + D    
Sbjct: 117 EEQRKKYLPKLASGEFMG-------------SFGLTEPNHGSNPGGMETKYKDMGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                W  ++P  D  ++ A+  EGR+   +V R +E     G       NK   R++AT
Sbjct: 164 NGAKLWISNAPFCDVAVVWAKNEEGRINGLIVERGME-----GFSTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            EL F N         N+          L  LDSA   ++   +  A      A+ YA+ 
Sbjct: 219 GELIFDNVKVP---KENLLPNKNGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    + ++ +A++  +I  A  L+ RL    +E K+ + + + A+       
Sbjct: 276 RIQFGKPIGAYQLQQKKLAEMVTEITKAQLLALRLGQLKNEGKATTAQISMAKR------ 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
                MA  +  EA + +G  G   E SI RH     +     G+ +  +L     +  G
Sbjct: 330 -NNVDMALNIAREARQVLGAMGITGEYSIMRHMMNLESVITYEGTHDIHLLITGMDIT-G 387

Query: 462 TNLFE 466
            N F+
Sbjct: 388 LNAFK 392


>gi|284042455|ref|YP_003392795.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946676|gb|ADB49420.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 395

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 119/350 (34%), Gaps = 36/350 (10%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+H + +  +        A+ +    L          +      +   +    +    + 
Sbjct: 70  GMHLTGYGCAG---ASATAYGLACLELEAGDSGVRSLVSVQGSLAMFAIWRWGSEEQKQQ 126

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P++   E                  GLTE   G+D  ++ ++ ++  D         W
Sbjct: 127 WLPRMARGE-------------AIGCFGLTEPDSGSDPGSMRTRARRDGDEWVLNGQKMW 173

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +  ++D  ++ AQ +  V  FLVPR        G     +  K+  R++ T EL   +
Sbjct: 174 ITNGTIADVAVVWAQTDDGVRGFLVPR-----GTPGFSAPEIHKKLSLRASVTSELVLDD 228

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGI 348
                   L  +T        L  L+ A   +        R     A+ Y++ R      
Sbjct: 229 VRLPDSARLPEATSLR---GPLSCLNEARYGIVWGAAGAARACFEAALDYSKTRIQFDKP 285

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    ++++ +A++A+ +  +T L+  L    D    R E  +  ++            A
Sbjct: 286 IASFQLVQQRLAEMAVKVNQSTLLALHLGRLKDAGTLRPEHVSMGKLANVNA-------A 338

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             V   A + +G +G   E  + RH     +     G+ +   L + + L
Sbjct: 339 LDVARTARQVLGANGITLEYPVIRHMNNLESVVTYEGTADVHALVIGHAL 388


>gi|297193204|ref|ZP_06910602.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720474|gb|EDY64382.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 608

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/548 (16%), Positives = 193/548 (35%), Gaps = 76/548 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+ +     +  A+  A  A+ N P    + P     +      ++    +  +      
Sbjct: 42  LDEIARLAENELAESFA-DADRNPPV---FDPA---TNTAPVPESFKKSYKAFMDSEYWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                        ++     A L L+    A  + S     A ++         K     
Sbjct: 95  LGLPEEIGGTTSPRSLIWAYAEL-LLGSNPAVWMYSSGPAFAGVLFDEGNEAQKKIAE-- 151

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                          +      + LTE   G+D+ A  ++  +  DG + + G K F++S
Sbjct: 152 ------------IAVEKRWGSTMVLTEPDAGSDVGAGRTKAIQQEDGSWHIEGVKRFITS 199

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIG 280
              D        +LA+ EG       +  FLVP+   D      G  NG+    +++K+G
Sbjct: 200 GEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWETGELGERNGVYATNVEHKMG 259

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T E+ F +     G+L+GD +     +  +     +     +++ +      A+ 
Sbjct: 260 LKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFMIIEFARMMVGTKAIATLSTGYLNALE 319

Query: 338 YARRRHV------SGGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--- 382
           YA+ R                  +   P ++R++           AL    A+  DE   
Sbjct: 320 YAKERVQGPDLKNFADKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIAL 379

Query: 383 ----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +      A   ++ PI K +  + +   +A++++  GGSGY++E  + ++ R++ 
Sbjct: 380 KETAGEDTKSLVALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAK 439

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GSSGKKVITILRDSISLC 494
            +++  G+      D     ++         L   +++ L  G+ G+++           
Sbjct: 440 IDTLYEGTTAIQGQDYFFRKIVRDQGQALNALSEEIKKFLAVGTGGEELAAARDALAKAA 499

Query: 495 KEDKGLARFLT-EKIALASSAAALYRAGMNDIADVFLENRFLDNCHS---THCMLHGRFN 550
            + + +   +T + IA       +Y+ G+N         R L         + +L G   
Sbjct: 500 VDLEAIVGTMTNDLIATGEDVKNIYKVGLNT-------TRLLMASGDVVVAYLLLRGAAV 552

Query: 551 AAHIIDSL 558
           AA  +++ 
Sbjct: 553 AAEKLETA 560


>gi|83951653|ref|ZP_00960385.1| isobutyryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83836659|gb|EAP75956.1| isobutyryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 565

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 148/398 (37%), Gaps = 47/398 (11%)

Query: 85  HAYGPGGERWDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       +KVE H   WH         ++      G+        +      +A  +
Sbjct: 189 EQFRRFA--VEKVEPHAHDWHLKDELIPMEIIEELAEMGVFGLTIPEEYGGFGLSKASMV 246

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T    + W PK+ S E  PT         
Sbjct: 247 VVSEELSRGYIGVGSLGTRSEIAAELILCGGTDAQKEHWLPKLASAEILPTAV------- 299

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG 254
                  TE   G+D+ ++ ++  +  +G + ++G+K +++ +  +    +LA+ +    
Sbjct: 300 ------FTEPNTGSDLGSLRTRASRDENGDWKITGNKTWITHAARTQVMTLLARTDPDTT 353

Query: 255 -CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLG 300
               +   L + +P          G+    ++  +G R     EL F N        L G
Sbjct: 354 DHRGLSMFLAEKTPGTDEAPFPTPGMSGTEIE-VLGYRGMKEYELSFDNFHVKGDNLLGG 412

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       +        + +A  +V   + +L  A+ YA+ R   G  LI+ P +   +A
Sbjct: 413 EEGKGFKQLMQTFEAARIQTAARAVGVAQAALDVAMQYAQDRKQFGKSLIEFPRVSGKLA 472

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A++I  A  L++  A   D  K    EA  A+++         ++A A     ++  G
Sbjct: 473 MMAVEIMVARQLTYYSAWQKDHDKRCDLEAGMAKLL-------GARVAWACADNGLQIHG 525

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G+  E  I+R   ++   +I  G+       +   L
Sbjct: 526 GNGFAMEYKISRILCDARILNIFEGAAEIQAQVIARRL 563


>gi|324997643|ref|ZP_08118755.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 402

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/414 (16%), Positives = 137/414 (33%), Gaps = 51/414 (12%)

Query: 68  CTAQEL--ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              QE      A+   P           WD+ E  P    +L+ +    L+      SF 
Sbjct: 11  RELQEWVHGFAADVVRP-------AAAEWDEREETP--WPILQEAAKIELYNFETLASFW 61

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 +  +    L+       G  +  +  + + +    TP    ++ P+ +    DP
Sbjct: 62  GDETGLSMPLVNEELF-WGDGGIGMAIFGTTLAVAGIFASGTPDQMVEFIPQCYGDASDP 120

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAF 243
                            +E   G+D++A+ ++       D         W  +  +++  
Sbjct: 121 ----------KVGAFCSSEPDAGSDVSAMRTRAVYDEARDEWTLTGQKAWATNGGIANIH 170

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A V+  +G       +      GL   R   K+G R++ T ++            L 
Sbjct: 171 VVQAVVDPELGSKGQAAFVVPPGTPGLESTRKIKKMGLRASHTADVFLDEVKLPGSCLLG 230

Query: 304 V------------------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                               +  ++  + L        +V   R +   A+ YA+ R   
Sbjct: 231 GKEKLDERLARAREGARSTGSAAMQTFE-LSRPTVGSQAVGIARAAYEYALEYAKDRVAF 289

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWC 404
           G  +I+   +   +AD+  +I AA  L  R A         +  E + +++ A     W 
Sbjct: 290 GRPIIENQSISFMLADMKTEIDAARLLVHRAAWMGRNGVPFTAGEGSMSKLKAGRVAVWS 349

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + A       ++ +GG+GY  E  + R +R+S    I  G+     L +   +
Sbjct: 350 TERA-------IQILGGAGYSREHPVERMHRDSKIYDIFEGTEQIQQLVIARAI 396


>gi|298714025|emb|CBJ27257.1| isovaleryl-CoA dehydrogenase [Ectocarpus siliculosus]
          Length = 441

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 142/384 (36%), Gaps = 33/384 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P   ++++ E   A     +R    GL        +       +     A   +  +L 
Sbjct: 74  DPQALQYNREEKFNA--EAFKRLGELGLLGVTVAPQYGGSGMDAS-----AACIVHEELS 126

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A          A  +  +     +        S E          + S   G+ ++E   
Sbjct: 127 AADPALCLSYLAHSMLFVNNLEQNG-------SDEQRSRFLPSACEGSTIAGMCMSEPGA 179

Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSD------AFIMLAQVEGRVGCFLVPR 260
           GTD+  +T++     DG  + + G K ++++  +D       F++ A+     G   +  
Sbjct: 180 GTDVLGMTTKAVPSPDGLSFKIDGAKMWITNGTTDGLTTGDVFLVYART--GPGRQDISM 237

Query: 261 LLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILI 316
            + +    G     +++ K G R++ T EL F         L+GD N +   +     + 
Sbjct: 238 FIVEKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGDENGAMLCMMRNLEIE 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A M V   R  +     Y + R   G  +     +++ IAD   +  A     + +
Sbjct: 298 RVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQKHIADSYAEYMAGKHYLYAV 357

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D + + +       + A  TK +C  MA  V   AM+ +GG GY +E  I R +R+
Sbjct: 358 AANLDLSSTGN------GLDADGTKLYCTTMAKNVADRAMQVLGGYGYCDEYQIERLWRD 411

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+  A   +++  L K
Sbjct: 412 AKLLEIGGGTLEAHHKNMVRDLAK 435


>gi|108805257|ref|YP_645194.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766500|gb|ABG05382.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 398

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 29/375 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W++ EF      L+ +     +   +  R +  P +   A  +    L       +    
Sbjct: 47  WNREEFP---FELVPKLARLNIAGHVIPREYGCPEMSNLASGLVMMELSRGDGSLSTFFG 103

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  + + +AL+ +    + W P             PM +        LTE   G+D+ 
Sbjct: 104 VHSGLAMTSIALLGSEEQRQRWLP-------------PMARMEKIGAFALTEPGHGSDVV 150

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  ++  DG       +W  +   +D  ++ A+ E           L +    G   
Sbjct: 151 MLETSAERDGDGWVLNGRKRWIGNGTFADVVVVWARDEEDGEVKG---FLVEKGTEGFTA 207

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           +R++ KIGNRS+   ++   N        L  +    +   +L       A  ++     
Sbjct: 208 ERIEGKIGNRSSWQADITLENVRVPAENKLENANSFADTSTVLTNTRYGVAWQALGHALA 267

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A+ YA+ R + G       +++  +A +  D+     + FRL+   D+ +      
Sbjct: 268 CYEAAVQYAKEREIFGIPQASFQLIQYRLAGMLADLTQMQLVCFRLSQLLDKGE------ 321

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A + K    +    + AEA + +GG+G + E  + +H  +        G+    
Sbjct: 322 -MTHGRASLAKLVTARQGKRICAEARDILGGNGVLLEYLVGKHLADMEIIYTYEGTDTVQ 380

Query: 451 VLDVLNLLEKGTNLF 465
            L V   +      F
Sbjct: 381 SLIVGRSITGEQAFF 395


>gi|86360171|ref|YP_472060.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
 gi|86284273|gb|ABC93333.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42]
          Length = 386

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 100/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++   G + L G K F+S  
Sbjct: 101 CEGEQRERYLLPAVRGEKIDALAITEPGAGSDMRGMKCAARRSG-GDFVLDGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G    +  + + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILKGYDSVSHRGYHNCTLSFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R     A+ YA  R   G  + 
Sbjct: 220 CRIPEAQVLGEVHRGFDIANRWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGRPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D   +       A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAADWLTLAAAWQVDAGLA-------ADRQIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|284921616|emb|CBG34688.1| Putative acyl-CoA dehydrogenase [Escherichia coli 042]
          Length = 401

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|163753133|ref|ZP_02160257.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
 gi|161326865|gb|EDP98190.1| acyl-CoA dehydrogenase [Kordia algicida OT-1]
          Length = 392

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 135/376 (35%), Gaps = 39/376 (10%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K +  P      +R+     I  GL        + P     A   + +   +M +
Sbjct: 29  AREWVKRDVSPIIEDYAQRAEFPNQIIKGLADIGAFGPYIPEEYGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S  S         +         K + PK+ S E+                
Sbjct: 89  IERGDSGVRSTASVQSSLVMYPIWKYGNEAQRKKYLPKLASGEWMG-------------S 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G++   +T+  + + D         W  +SP     ++ A+  EGR+   +V
Sbjct: 136 FGLTEPDHGSNPGGMTTNYKDMGDHYLLNGAKMWISNSPFCQIAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316
            R +E     G       NK   R++AT EL F N        L   +G    +  L   
Sbjct: 196 ERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGCLDSA 250

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++         A+ Y++ R   G  +    + ++ +A++  +I  A  L++RL
Sbjct: 251 RFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLLAWRL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               +  K+ S + + A+           +MA  +  EA + +GG G   E SI RH   
Sbjct: 311 GVLRENGKATSAQISMAKR-------NNVEMALKIAREARQMLGGMGISGEYSIMRHMMN 363

Query: 437 SPANSILLGSGNAMVL 452
             +     G+ +  +L
Sbjct: 364 LESVVTYEGTHDIHLL 379


>gi|331653095|ref|ZP_08354100.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
 gi|331049193|gb|EGI21265.1| putative acyl-CoA dehydrogenase [Escherichia coli M718]
          Length = 401

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 137/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 LFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|302561942|ref|ZP_07314284.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479560|gb|EFL42653.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 408

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 129/394 (32%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDASGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DANDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVINGTKTWATNGGIANVHVVVAVVDPELGSKGHASFIIPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
              G    +   K G R++ T E+            L                +    E 
Sbjct: 195 GTPGCSQGQKFKKHGIRASHTAEVVLDGVRVPGSCLLGGKEKLDERLARAREKAKQGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA  R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYATTRQQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 315 QIDAARLLVWRASWMAINGKPFTAA------EGSMSKLFASETAKKVTAQAIQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R++   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|308810709|ref|XP_003082663.1| probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
 gi|116061132|emb|CAL56520.1| probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri]
          Length = 434

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/392 (18%), Positives = 139/392 (35%), Gaps = 27/392 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           P    WD+ +  P    + R++   G+        W +   P   +         L +  
Sbjct: 53  PRTHEWDETKTIP--REVYRKTYEAGIMPAVVGKPWPKELVPECPEPEGFDYFHELIVFD 110

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLG 201
           +                  L           P +    S +      AP  +    I L 
Sbjct: 111 EFARCGSGG---------VLWGLLEGIHIGLPPVLNFGSEDLRRRVGAPCLRGEGIICLA 161

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I  + +    G  Y ++G K ++++ +   +  +A   G  G   +  
Sbjct: 162 ITEPYAGSDVANIRCEAKLDPSGKFYSVTGEKKWITNGIWADYFTVAVRTGGPGMGGISL 221

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           L+ + S  G+  +R+ + +G  ++ T  + F +       L+G+ N     +        
Sbjct: 222 LVIERSMPGVDCRRM-DCMGVWASGTTFITFEDVKVPVENLIGNENEGFKYIMHNFNHER 280

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
               I +    RV   E+  YA RR   G  LI+ PV++  +A++   + A   L   + 
Sbjct: 281 WGFVIQANRFARVCYEESFKYAHRRRTFGKPLIEHPVIRHKLAEMIRQVEATHCLLETIT 340

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHY 434
              +         A A I   + K    K+      EA +  GG+ Y+       + R Y
Sbjct: 341 YQMNTMTKEEAAKALAGI-TALAKVQSTKVFEFCAREAAQVFGGASYVRGGQGEKVERLY 399

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           R+  A +I  GS   M+   +    K   + +
Sbjct: 400 RDVRAYAIPGGSEEIMLDLGVRQAMKQWKIAQ 431


>gi|115526349|ref|YP_783260.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520296|gb|ABJ08280.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 404

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 124/364 (34%), Gaps = 37/364 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL        +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLIGITLPEEYGCASASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D   + ++ +K++
Sbjct: 122 YAYGDENQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTKAEKVA 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLSGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 227 ASITGEIVMDGVVVPEEALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCFER 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R      L    ++++ +AD+  +IA     S R+    DE K        A 
Sbjct: 281 ARQYTLDRRQFNRPLAATQLVQKKLADMETEIALGLQASLRVGRLMDEGK-------MAP 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +
Sbjct: 334 EMISLVKRNNCGKALDIARVARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALIL 393

Query: 455 LNLL 458
              +
Sbjct: 394 GRAI 397


>gi|29830933|ref|NP_825567.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29608046|dbj|BAC72102.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 608

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/555 (14%), Positives = 178/555 (32%), Gaps = 79/555 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +EL  L E        E    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILEELTRLSE----NELAESFADADRNPPV---FDP---ETNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWAYAELVLGANPAVWMYSSGPAFAGILFEE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNEVQKHIAKIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRL--------- 275
            K F++S   D        +LA+ EG   G   +   L            L         
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYEFDFETGELGERNGAYAT 252

Query: 276 --KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             ++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA  R                  +   P ++R++           AL    A 
Sbjct: 313 GYLNALEYATERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLHTAA 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D+        +  +   A   ++ PI K +  +     +A++++  GGSG+++E  I 
Sbjct: 373 IQDDIQVKESAGEDTTALEALNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITIL 487
           ++ R++  +++  G+      D     ++         L   +++   +G+ G+++    
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDFFFRKIVRNQGTALNSLAEDIKKFLAIGTGGEELAPAR 492

Query: 488 RDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDIADVFLENRFLDNCHST---HC 543
                   E + +   +   +A        +Y+ G+N         R L         + 
Sbjct: 493 EQLAKAAVELEAIVGLMLTDLAATEQDVKNIYKVGLNT-------TRLLLASGDVVVGYL 545

Query: 544 MLHGRFNAAHIIDSL 558
           +L G   AA  +++ 
Sbjct: 546 LLRGAAVAAEKLETA 560


>gi|320009824|gb|ADW04674.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 608

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/506 (16%), Positives = 177/506 (34%), Gaps = 80/506 (15%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              +  E+  L E        +    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILDEVTRLAE----NELADSYADADRNPPV---FDP---ETNTAPVPGSFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L+    A  + S     A ++        
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWGYAEL-LLGSNPAVWMYSSGPAFAGILFDEGNEAQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K                    +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 147 KK--------------VAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+   D      G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKFHFDWTTGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     +++ +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIAALST 312

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           +L    A+
Sbjct: 313 GYLNALEYAKERVQGTDLSQFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTAS 372

Query: 379 SFDEAKSRSEEAAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D  + +      A+ +        PI K +  + +   +A++++  GGSGY++E  + 
Sbjct: 373 VQDAIQVKEAAGEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R++  +++  G+      D               F  + +D G+S   +   ++  +
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDF-------------FFRKIVRDQGASLNALSEEIKKFL 479

Query: 492 SLCKEDKGLARFLTEKIALASSAAAL 517
           +  + D+ L+  L     LA +A  L
Sbjct: 480 AGAQGDEELSGSLDN---LAKAAVDL 502


>gi|305665430|ref|YP_003861717.1| acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
 gi|88710185|gb|EAR02417.1| Acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170]
          Length = 392

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 145/386 (37%), Gaps = 46/386 (11%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
           L        +W K +  P      +++     I +GL        + P     A   + +
Sbjct: 23  LLVRDA-ARQWVKRDISPIIEEYAQKAEFPKQIINGLAEIGAFGPYIPEEYGGAGLDQIS 81

Query: 139 RLYLMAQLEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
              +M ++E G     S  S         +    T    + + PK+ + E+         
Sbjct: 82  YGLIMQEIERGDSGVRSTASVQSSLVMYPIFAYGTEEQKQKYLPKLATGEFMG------- 134

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEG 251
                   GLTE   G++ + + ++ + + D         W  +SP +D  ++ A+  EG
Sbjct: 135 ------CFGLTEPNHGSNPSGMETKFKDMGDHYLLNGAKLWISNSPFADIAVVWAKNEEG 188

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           R+   +V R +E     G        K   R++AT EL F N         N+  G    
Sbjct: 189 RIHGLIVERGME-----GFSTPETHGKWSLRASATGELIFDNVKVP---KENLLPGKNGL 240

Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              L  LDSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I
Sbjct: 241 GAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEI 300

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L+FRL    +E K+ + + + A+            MA  +  EA + +GG G   
Sbjct: 301 TKAQLLAFRLGQLKNEGKATTAQISMAKR-------NNVDMAIKIAREARQVLGGMGITG 353

Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452
           + SI RH     +     G+ +  +L
Sbjct: 354 DYSIMRHMMNLESVITYEGTHDIHLL 379


>gi|218461618|ref|ZP_03501709.1| acyl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 386

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 14/289 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +    ++            +   + 
Sbjct: 101 CEGEQRERYLLPAVRGEKIDALAITEPDAGSDMRGMKCAARRDGADFVINGTKHFISHAD 160

Query: 239 MSDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++D  I+ A          +       L D    G    +  + + +R      L F++ 
Sbjct: 161 VADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILKGYDSVSHRGYHNSTLSFTDC 220

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 +LG+++              L  A   V   R     A+ YA  R   G  +  
Sbjct: 221 RIPEAQVLGEVHRGFDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERKQFGRPIGA 280

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +AD+  +I AA  L+   A   D   S       A       K +  +M   V
Sbjct: 281 NQGVSFKLADMITEIDAADWLTLAAAWRLDTGLS-------ADRQIASAKLYASEMLARV 333

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 334 TDEAIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|290474775|ref|YP_003467655.1| acyl coenzyme A dehydrogenase [Xenorhabdus bovienii SS-2004]
 gi|289174088|emb|CBJ80875.1| acyl coenzyme A dehydrogenase [Xenorhabdus bovienii SS-2004]
          Length = 378

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 122/376 (32%), Gaps = 37/376 (9%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V  H AW        +   R    GL        +  + +   H  R A +     + AG
Sbjct: 24  VPEHQAWEYNGLMARSFWERLGKAGLLGISVSPEYGGLGK---HDYRFAVILTEELIRAG 80

Query: 150 HLMSPSVTSASMVALM----TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             +   V    ++A       +    + W P++                     + +TE 
Sbjct: 81  VTVPGIVAHNDIIASYIFALGSGEQKQKWLPELC-------------LGKRVAAIAMTEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG++ A I +  ++  D      G  +  +   +D  ++  + E       +  L+ + 
Sbjct: 128 GGGSNTADIKTVAKRQGDHYLVNGGKTYITNGINADLIVVAVKTEQGQQGQGISLLVIER 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G        KIG   + T EL F +       L+G  N+             L  + 
Sbjct: 188 DMAGFSRGEPMKKIGWNGSDTAELFFHDCKVPVTNLIGRENLGNYYFMSAMPRERLSISA 247

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++V+     L   + Y + R      +      +  +A +  ++  A          F +
Sbjct: 248 VAVASAEHILQSTLAYVKERKAFDQPIGSFQYNRFILAQLDTEVKIARIYLDNAVEQFSK 307

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +AA         K+W  ++   V    ++  GG+GY+ +    +++  S A +I
Sbjct: 308 GLFSLVDAAR-------IKWWTTELQMKVADRCLQLYGGAGYMRDSVAGKNWLNSRAQTI 360

Query: 443 LLGSGNAMVLDVLNLL 458
             G+   +   +   +
Sbjct: 361 YGGTSEVLQEMISKSM 376


>gi|289582554|ref|YP_003481020.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289532107|gb|ADD06458.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 387

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 123/356 (34%), Gaps = 23/356 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G +    +    P V + A+ +    L                     +  
Sbjct: 46  ELISEMGELGFYAPNLEGYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W PK+   E                  GLTE   G++ + + +  +   DG
Sbjct: 106 YGSEEQKEEWLPKLGQGE-------------AVGCFGLTEPEHGSNPSGMETYAEADGDG 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP+SD  I+ A+ +       V   L +   +G+   ++  K+  R++
Sbjct: 153 YVLNGSKTWITNSPISDVAIVWAR-DRSSEDNPVRGFLVETDRDGVSTNKITEKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
            T E+  +N        L   +G    +  L       A  ++   R +  EA  YA+ R
Sbjct: 212 ITGEIGLNNVHVPEENVLPGVSGMKGPLSCLTQARYGIAWGAIGAARDAFEEARQYAQDR 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              GG +    + +R +A++A  I  A  L++RLA   +                 ++K 
Sbjct: 272 EQFGGPIGRFQLQQRKLAEMATQITLAQLLAYRLAELKERGD-------MQPHHVSLSKR 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +MA      A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 325 NNVRMARDQTRVAREMLGGNGITTDYSPMRHMANMETVYTYEGTHDIHTLVLGEEL 380


>gi|298206885|ref|YP_003715064.1| Acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
 gi|83849519|gb|EAP87387.1| Acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559]
          Length = 453

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 128/349 (36%), Gaps = 29/349 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    +    +  V +    I  AR+ +     +      S  +   + L  +     
Sbjct: 124 AGIAYKGYGCPEQNFVMEGIIAIEMARVDV---SMSTFFGVHSGLAMGSIYLCGSEEQKL 180

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGH 231
           +W PK             MQ+       GLTE   G+ I+  + +  Q+  D        
Sbjct: 181 EWLPK-------------MQRMEAIGAFGLTEPNVGSAISQGMETTCQRDGDTWILNGQK 227

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           KW  ++  +D  I+ A+             L      G   +++++K+  R+     +  
Sbjct: 228 KWIGNATFADVTIVWAKDVDDKQVKG---FLVRKGTPGFSPEKIEDKMALRTVENALITI 284

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           ++        L  +    +  K+  +     A  +V   R +   A+ Y ++R   G  +
Sbjct: 285 TDCRISESDRLQEANSFKDTAKVLKMTRAGVAWQAVGCARGAYESAVKYCKKREQFGKPI 344

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++  + ++  ++ A   L +RL+   DE   + E+A+ A       K +C     
Sbjct: 345 ATFQLIQNHLVEMLANLTAMQTLCYRLSELQDEGLLKDEQASLA-------KVFCSMRTR 397

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            V++ A E +GG+G + E  +AR   ++ A     G+     L V   +
Sbjct: 398 DVVSRAREVMGGNGILLEHDVARFVADAEAIYSYEGTKEINSLIVGRAI 446


>gi|297560543|ref|YP_003679517.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844991|gb|ADH67011.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 598

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 98/554 (17%), Positives = 188/554 (33%), Gaps = 68/554 (12%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD--KVE 98
           LL   +                  L    +   R+A ++  P          R+D  +V 
Sbjct: 14  LLYEWLDTEALTRRPHYADHSRETLDAALELAERVATDHFAPHNKTNDANEPRFDGERVH 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P     L      GL  +    S                 +  A L        +  +
Sbjct: 74  VIPEVGRALEVYAATGLSAAGMPASVGGAQVPHVVSSACGAYFQAANLGTSAYPFLTSGN 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++    TP     W               PM +      + L+E + G+ +A IT++ 
Sbjct: 134 ARLLLAHGTPEQVDTWV-------------RPMVEGRFTGTMCLSEPQAGSSLADITTRA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLED-------- 264
           ++  +G Y L G+K ++S+   +       ++LA++ G   G   +   +          
Sbjct: 181 EEDGEGGYRLFGNKMWISAGDHELTENIVHLVLAKIPGGPPGVRGISLFVVPKYLLEADG 240

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDM 312
             G  N +    L +K+G R      L F              G+L+G+ +     +  M
Sbjct: 241 TIGERNDVVPAGLNHKMGYRGTVNAMLNFGEGRHAPGGRPGAVGYLVGEPHQGLKYMFHM 300

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIAD 361
                +     + +       +++ YAR R                 +++   ++R +  
Sbjct: 301 MNGARIGVGAGAAAVGYTGYLKSLAYARERLQGRPLGDKDPGQPQVPIVEHTDVRRMLLA 360

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415
               +  A AL    A   DE  S  ++ A         ++ PI K W  +      + A
Sbjct: 361 QKSYVEGALALVLYCARLVDETASAEDDKARERAHLLLDVLTPIAKSWPSQWCVEANSLA 420

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL-----FEQ 467
           ++  GG GY  E  + +HYR++  N I  G+     LD+L    +L+ G+ L       +
Sbjct: 421 IQVHGGYGYTREYDVEQHYRDNRLNPIHEGTHGVQALDLLGRKAVLDGGSRLSLLVETAR 480

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK-IALASSAAALYRAGMNDIA 526
             +   ++LG    +   +L +++    E    A    +  +ALA++   L   G   +A
Sbjct: 481 ATADRARELGGREAEYAVLLSEALDRTAETAAAAWAEGDPAVALANATPYLEAVGHVVVA 540

Query: 527 DVFLENRFLDNCHS 540
            ++LE     +   
Sbjct: 541 WMWLEQLVAAHGRE 554


>gi|83952006|ref|ZP_00960738.1| glutaryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83837012|gb|EAP76309.1| glutaryl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 417

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 127/368 (34%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL  +     +  +          AR           +MS  S      + 
Sbjct: 76  EIFREMGEMGLLGTTIPEEYGGLGGGYVGYGLVAREIERVDSGYRSMMSVQSSLVMYPIY 135

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                 GLTE   G+D A + ++ +KI  
Sbjct: 136 AYGSEEQRQKYLPKLASGEF-------------IGCFGLTEPDAGSDPAGMKTRAEKIEG 182

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +   G   +   + +    GL   +++ K   R+
Sbjct: 183 GYRLKGSKMWISNSPIADVFVVWAKSDAHDGK--IRGFVLEKGMKGLSAPKIEGKQSLRA 240

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+             +     VE +K     L+ A   ++   +  AE   +A R 
Sbjct: 241 SITGEIVMDGVEV----GEDALLPNVEGLKGPFGCLNRARYGIAWGVMGAAEFCWHAARQ 296

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R      L    + +  +A++  +I      + R+    D A +       A  M 
Sbjct: 297 YGLDRQQFRKPLAQTQIFQLKLANMQTEITLGLQAALRVGRLMDAANA-------APEMI 349

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A +  GG+G  EE  + RH       +   G+ +   L +L  
Sbjct: 350 SLIKRNNCGKALEIARHARDMHGGNGISEEFQVIRHMMNLETVNTYEGTHDVHAL-ILGR 408

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 409 AQTGLQAF 416


>gi|120434501|ref|YP_860198.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117576651|emb|CAL65120.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 391

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/351 (21%), Positives = 129/351 (36%), Gaps = 38/351 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMT 166
           +GL        + P     A   + +   +M ++E G     S  S         +    
Sbjct: 56  NGLAEIGAFGPYIPEEYGGAGLDQISYGLIMQEIERGDSGIRSTASVQSSLVMYPIFKYG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    K + PK+ S E                  GLTE   G++   +T+  +   D   
Sbjct: 116 TEEQKKKFLPKLASGEM-------------IGCFGLTEPDHGSNPGGMTTNFKDNGDHYL 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP +D  ++ A+ E      L+     +    G       NK   R++AT
Sbjct: 163 LNGAKMWISNSPFADIAVVWAKNEDGRIHGLI----VERGMEGFTTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            EL F N         N+          L  LDSA   ++   +  A      A+ YA+ 
Sbjct: 219 GELIFDNVKVP---KENLMPNKSGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  + + ++ +A++  +I  A  +++RL    +E K+ S + + A+       
Sbjct: 276 REQFGVPIASKQLQQKKLAEMITEITKAQLMAWRLGTLRNEGKATSAQISMAKR------ 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               +MA  +  EA + +GG G   E SI RH     +     G+ +  +L
Sbjct: 330 -NNVEMAIKIAREARQVLGGMGISGEYSIMRHMMNLESVITYEGTHDIHLL 379


>gi|302535475|ref|ZP_07287817.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302444370|gb|EFL16186.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 608

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/548 (16%), Positives = 187/548 (34%), Gaps = 76/548 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  +     +  A+  A  A+ N P    + P     +      ++       +      
Sbjct: 42  LSEIARLAENELAESFA-DADRNPPV---FDPA---TNTAPVPASFKKSYEAFMDSEYWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                        ++     A L L +        S    +  +                
Sbjct: 95  LGLPEEIGGTTSPRSLIWAYAELLLGSNPAIWMYSSGPAFAGVLHEE------------- 141

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
               E          +      + LTE   G+D+ A  ++  +  DG + + G K F++S
Sbjct: 142 --GNEAQKRIAQIAVEKRWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITS 199

Query: 238 PMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIG 280
              D        +LA+ EG       +  FLVP+   D      G  NG+    +++K+G
Sbjct: 200 GEHDMEENILHYVLARPEGHGPGTKGLSLFLVPKFHFDWETGELGERNGVYATNVEHKMG 259

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T E+ F +     G+L+GD +     +  +     +     +++ +      A+ 
Sbjct: 260 LKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFMIIEFARMMVGTKAIATLSTGYLNALE 319

Query: 338 YARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--- 382
           YA+ R                  +   P ++R++           AL    A+  DE   
Sbjct: 320 YAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQDEIAV 379

Query: 383 ----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +  S E     ++ PI K +  + +   +A++++  GGSGY++E  I ++ R++ 
Sbjct: 380 KQAAGEDASAEIGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAK 439

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCK 495
            +++  G+      D     ++         L  T+++ L    G + +   RD+++   
Sbjct: 440 IDTLYEGTTAIQGQDFFFRKIVRDQGASLNILSETIKKFLAEGPGGEDLAPARDALAKAA 499

Query: 496 EDKGL--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFN 550
            D      + + +  A       +Y+ G N         R L         + +L G   
Sbjct: 500 VDLEAIVGQMIVDLTATGEDVKNIYKVGQNT-------TRLLMASGDVVVGYLLLKGAAV 552

Query: 551 AAHIIDSL 558
           AA  ++  
Sbjct: 553 AAAKLEGA 560


>gi|85713545|ref|ZP_01044535.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85699449|gb|EAQ37316.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 404

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 126/364 (34%), Gaps = 37/364 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL+     + +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLNGITLPQEYGCADASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ + E+                 GLTE   G+D   + S+ +K+S
Sbjct: 122 YAYGDENQRKKYLPKLATGEW-------------VGCFGLTEPDAGSDPGGMKSRAEKVS 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKTWISNAPIADLFVVWARS--AAHDNQIRGFVLEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 227 ASVTGEIVMDGVVVPEESLLPNVSGLKGP------FGCLNRARYGISWGVMGAAEDCMHR 280

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    ++++ +AD+  +IA     S R+    DE K          
Sbjct: 281 ARKYVLERKQFGRPLAAAQLVQKKLADMQTEIALGLQGSLRVGRLMDEGK-------MTP 333

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A  +   A +  GG+G   E  + RH     A +   G+ +   L +
Sbjct: 334 EMISIIKRNNCGKALDIARAARDMHGGNGIQIEYHVMRHAANLEAVNTYEGTHDVHALVL 393

Query: 455 LNLL 458
              +
Sbjct: 394 GRAI 397


>gi|325962780|ref|YP_004240686.1| butyryl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468867|gb|ADX72552.1| butyryl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 387

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 146/407 (35%), Gaps = 41/407 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   Q+L+          H   P   + D+    P  + ++++    GL    +   F 
Sbjct: 6   LSEEYQDLSDTVRDFAD--HVVAPVSAKHDEEHSFP--YEVVKQMAEMGLFGLPFPEEFG 61

Query: 126 PVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +         A   L  + Q  A  L +     A  +    T    ++W P + S    
Sbjct: 62  GMGGDYFALALALEQLGRVDQSVAITLEAGVSLGAMPIYRFGTEAQKQEWLPLLASG--- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-- 242
                         G GLTE   G+D     +  ++  DG + ++G+K F+++  +D   
Sbjct: 119 ----------QALAGFGLTEPEAGSDAGGTKTTARRE-DGQWVINGNKEFITNSGTDITR 167

Query: 243 -FIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              + A       E       +  +L      G   ++  NK+G  ++ T  L   +   
Sbjct: 168 LVTVTAVTGRKEREDGTVQKEISTILVPTDTPGFKAEKAYNKVGWNASDTHPLTLQDVRV 227

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILID 351
                L V      +   L  LD   ++++ +     +  +  ++ YAR R   G  +  
Sbjct: 228 PEANLLGVEGRGYANF--LSILDEGRIAIAALATGAAQGCVDLSVKYARERSAFGQNIGK 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   IA +     +A    +  A      K    +AA A+++A        + A   
Sbjct: 286 YQAISFKIARMEARAHSARLAYYDAAFRMLAGKPFKTQAAIAKMVAG-------EAAMDN 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A +  GG G+I E ++ARHYR+S    +  G+    ++ +   L
Sbjct: 339 ARDATQVFGGYGFINEFTVARHYRDSKILEVGEGTTEVQLMLIAREL 385


>gi|308177362|ref|YP_003916768.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307744825|emb|CBT75797.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 382

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 140/365 (38%), Gaps = 32/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             + + +  +GL        F  +       ++     ++ +   A  L         + 
Sbjct: 40  REVWQSAGENGLLGLAVPEEFGGMGIDDYRFRVVLDEEFVRSGHLAVALAFHLHDDLVLP 99

Query: 163 AL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            L    +  +   W P++                S      LTE   G+D+ A+ ++  +
Sbjct: 100 YLLSYGSAELKAKWLPRMVDG-------------STITSCALTEPGAGSDLRAVRTKAVR 146

Query: 221 ISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLK 276
             D  + +SG K F+ ++   DA ++LA+ +G   R G       + + S  G    +  
Sbjct: 147 DGDD-WLISGQKTFIGNAAFGDASLVLARTDGESSRAGAHSFSLFMVERS-EGYSNGKPF 204

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F         L+G++      V+       L  A+ + +    S  
Sbjct: 205 DKMGLRASDTAELFFDEVRVSATDLVGEVGQGLSYVKAQLPQARLALAVAASAICSASFE 264

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A+ + + R   G +L +    +  +AD+  +     +   R   +F+E +  + +AA  
Sbjct: 265 QALEHTKNRSTFGQVLTEYQNTRFELADLKTEAHVTQSFVDRAVLAFNEGELNASDAA-- 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K W  + A  +  +A++  GG GYI E  IA+ +  S   +I  G+   M   
Sbjct: 323 -----EVKLWASESAKKLSDKALQLHGGYGYIMEYPIAQSFTASRLLTIFGGTSEIMRET 377

Query: 454 VLNLL 458
           +   L
Sbjct: 378 IGRAL 382


>gi|327440686|dbj|BAK17051.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 314

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 113/302 (37%), Gaps = 23/302 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P     D+ +  P    ++ +S   GL        +           + +    + +  
Sbjct: 25  DPLAGEIDREDRIPDH--IMEKSKEMGLFGLSIPAEYGGTGID--MVGKCSLFEEIGRTS 80

Query: 148 AGHLMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            G++      +      +  + T    + + P++ S E             +     LTE
Sbjct: 81  NGYMTVIGAHTGIGSVGIVELGTEEQKQKYLPRMASGE-------------IIGAFALTE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+  AA+ +   +  D        ++  ++P++  F ++A  +   G   +   L D
Sbjct: 128 TTAGSHAAALKTTAVRKGDKYILNGAKQYITNAPIAGVFTVMAVTDPTKGAKGITSFLVD 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSA 321
            S  GL   + + K+G R + + E+ F +    +   L V   G V  + IL       A
Sbjct: 188 KSAPGLIIGKTEEKMGLRGSHSSEIFFEDCEVPVENVLGVEGLGYVNALTILANGRAGLA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   +     ++ YA  R   G  + +Q +++  +A++ALDI    + ++R+A   D
Sbjct: 248 ARNLGSAQKLFELSVKYAHEREQFGKPIFEQQIIQHYLAEMALDIETLRSFTYRVAWMVD 307

Query: 382 EA 383
           + 
Sbjct: 308 QG 309


>gi|126738396|ref|ZP_01754101.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126720195|gb|EBA16901.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 387

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 124/370 (33%), Gaps = 40/370 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-- 161
             +  +++  GL+ +                      +LM + E G        +     
Sbjct: 43  KDIQAKAMQAGLYAANMPEEVGGAGLDT-------LTWLMYEKELGRANYALHWTGVARP 95

Query: 162 --VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + L  T    + +               P  K      L +TE   G+D+  + +  +
Sbjct: 96  SNILLAGTDEQKEKYL-------------FPCMKGEKWDCLAMTEPDAGSDLRGMKASAR 142

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQR 274
           +  D  + L+G K F+S    +D  I           R     +     D    G   + 
Sbjct: 143 QDGDD-WILNGTKHFISHADIADFAICFMATGVEETPRGPKKKITAFFVDKGTPGFEVRD 201

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               + +R      LEF +       +LG+++              L  A   +     +
Sbjct: 202 GYGNVSHRGYTNAVLEFDDCRLPSSAILGEVDKGFDVANTWLGATRLQVAATCLGRAERA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  ++ YA  R   G  +     +   +AD+AL++ AA  L++     FD+      + +
Sbjct: 262 LQHSVEYAVERKQFGQQIGKFQGISFKLADMALELKAANLLTWEAGWKFDQGTVTESDMS 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A        +M   V  EA++  GG G ++E  + R +R++    I  G+     
Sbjct: 322 MAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQR 374

Query: 452 LDVLNLLEKG 461
             +   + + 
Sbjct: 375 HIISREMLRA 384


>gi|83309407|ref|YP_419671.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82944248|dbj|BAE49112.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 553

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 124/367 (33%), Gaps = 35/367 (9%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G+        +  +   +              +  G L + S  +  ++ L  T   
Sbjct: 207 AEMGVFGLTLPEEYGGLGLGKMSMCVVTEELSRGYIGVGSLGTRSEIAGELIRLGGTEEQ 266

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W PKI S E  PT                TE   G+D+ ++ ++  K  D       
Sbjct: 267 KQEWLPKIASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKQGDEYVVTGN 313

Query: 231 HKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQRLKNKIG 280
             W   +  +D   +L +          +  ++               G+    +K  +G
Sbjct: 314 KTWITHAARTDVMTLLVRTNPDTKDWKGLSMMIAPKPRGTEANPFPAEGMTGGEIK-VLG 372

Query: 281 NRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     EL F          L G        + +      + +A  +V   + ++   +
Sbjct: 373 YRGMKEYELGFDGFKVPAANLLGGVEGQGFKQLMETFESARIQTAARAVGVAQCAMEVGL 432

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  + + P +   IA +A++   A  L++  A   DE      EA  A+++
Sbjct: 433 KYANERVQFGKPIYEFPRVGGKIAWMAVETMIARQLTYFSAREKDEGHRCDIEAGMAKLL 492

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A A    A++  GG+GY EE  I+R   ++   +I  G+       +  
Sbjct: 493 AA-------RVAWANADNALQVHGGNGYAEEYPISRILCDARILNIFEGAAEIQAQVIAR 545

Query: 457 LLEKGTN 463
            L  G  
Sbjct: 546 GLLSGAR 552


>gi|319761248|ref|YP_004125185.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115809|gb|ADU98297.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 416

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 141/395 (35%), Gaps = 43/395 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R+    G         +  +                  +    L++ +      +  
Sbjct: 49  ELRRKMADMGYFGITIPEEYGGMGLGTFEYCLICEQLARGWMSVASLVARA--QGGFIKN 106

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + + + P++   E+                  L+E   G+D+A+I+ + + + D 
Sbjct: 107 EMPEEMRRKYLPRVVRGEF-------------LNASALSEPDTGSDLASISCRAELVGDE 153

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS----PNGLCYQRLK 276
                   W   +  +D   + A+       +     +   L +      P G+   +  
Sbjct: 154 WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWEGISCFLIEKKRGEFPPGM-VGQPI 212

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRV 330
            KIG     T EL  ++         N+   P +   I+          +A  ++   + 
Sbjct: 213 PKIGYFGWKTFELALNDLRVP---RENLIGAPGQAFLIMAKGLETARAHTAARAIGLAQG 269

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +AI YAR R   G  + +   ++  IA +A ++ AA  L   + ++ D  +    EA
Sbjct: 270 ALEDAIAYARERKQFGMPIAEHQAIRFKIATMATEVEAARQLLHYVCSAIDSGRRCDTEA 329

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +         K +  +MA  V +EA++  GG+GY +  ++ RH+R++    I  G+    
Sbjct: 330 SM-------VKLFATEMAERVTSEALQIFGGAGYTKLFAVERHWRDARLTKIFEGTSEIQ 382

Query: 451 VLDVLNLLEKGTNLFEQLFS--TLEQDLGSSGKKV 483
              + N L  G ++ E + +    E   G+  +  
Sbjct: 383 QRIIANNLL-GKSVLEDMIASRAFESAAGARTEAA 416


>gi|327355369|gb|EGE84226.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 622

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 119/542 (21%), Positives = 204/542 (37%), Gaps = 77/542 (14%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQ 71
           +PS +     Q    I +  Y  D+         L +  PS + ++L      VLS +  
Sbjct: 2   EPSSATTGFFQAQPTI-LPQYYEDAAFRRIISLYLPSPLPSSIDEDLSRFSRLVLSRSHM 60

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      G     D +     W  L  R I +G+    +  +      
Sbjct: 61  AYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGWRKLQDRGIEEGMVALAYADAQSHNGG 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               ++   R Y   +              S  AL+T P    D A K+  R  +  + A
Sbjct: 121 NTGTQLNN-RAYQFIKYALWT---------SSAALVTCPSAMTDGAAKMLGRHLNGPDGA 170

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKIS----------D----- 223
              +            +   G  +TE++GG+D+    + G+K+S          D     
Sbjct: 171 IFTEARNRLISRDPSFAWTSGQWMTERKGGSDVRGTETVGRKLSVEEQNASKGVDELGYP 230

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP------NGLCYQ 273
            G + L G KWF S+  ++  IMLA+    G++  F  P R    G        NG+  Q
Sbjct: 231 LGPWQLDGFKWFSSATDANMAIMLAKTGPNGQISTFYAPLRRKVPGGAEGETELNGVRIQ 290

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 291 RLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVREISTLLNITRVHNMAGAVGGWARGLA 350

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKSRS 387
            +  YA+ R   G +L + P   RA+A   +       L   +A+        D + +++
Sbjct: 351 ISRAYAKVRVARGKLLTEMPAHVRALARDHVMYRGHLNLLHFVASILGISEGQDSSLTQA 410

Query: 388 EEA-----------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IAR 432
            +A           A  R++ P+ K      +   +   ME +GG GY+E       IAR
Sbjct: 411 TQASILPTNAQQSGALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVLNIAR 470

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            +R+    SI  G+ + M  D++ ++  ++G  +   +   +   L  + K       + 
Sbjct: 471 IFRDICVLSIWEGTTDIMADDLVRVVKSKQGPAILVAVGQWVASALAIARKHSFQAEAEI 530

Query: 491 IS 492
           I 
Sbjct: 531 IQ 532


>gi|238790512|ref|ZP_04634280.1| hypothetical protein yfred0001_480 [Yersinia frederiksenii ATCC
           33641]
 gi|238721381|gb|EEQ13053.1| hypothetical protein yfred0001_480 [Yersinia frederiksenii ATCC
           33641]
          Length = 383

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 137/371 (36%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     +R    +G+        +  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--KEFMRALSDNGISLLGVPEEYNGI--PADYVTQMLALMEVSKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +P   +             T ++ +     A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMMRFGSPEQLR------------KTAESTLATGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           + +  G+  
Sbjct: 137 TTSYTRN-NGKVYLNGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVESNRPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +  +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAAKYANQRIQFGKPIGHNQMIQEKLVLMAVKIENMRNMVLKVAWQADMHQSLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA         K +C + A  VI +A++ +GG GY ++  ++R +R+     I  G+   
Sbjct: 315 AAM-------CKLYCARTALEVIDDAIQIMGGLGYTDDARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYIAGRQILK 378


>gi|319440934|ref|ZP_07990090.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 399

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 135/351 (38%), Gaps = 27/351 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W +  F     ++ + +   GL        F        ++  A     +A+ + 
Sbjct: 31  PNVDKWHEQGFCD--RSMYQAAGELGLFGITSPEEFGGGGMPD-YRFNAILSEELAEADC 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +         +V++     +   +  +  + E      AP+        + +TE   G
Sbjct: 88  GSV---------IVSIQVINDLVIPYLERFATDEQKKKYLAPLCSGEKIGAIAMTEPGAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            D+A I +   K  +G + L+G K F+S+ + +D  +++A  +   G   V  L+ D   
Sbjct: 139 ADLAGIRTTALKNDEGNFVLNGSKTFISNGVQADFTLVVAITDPSQGRAGVSILIVDAET 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G        K+G ++  T EL F N       +LG+     G +        +  A+ S
Sbjct: 199 EGFTKTGPLKKVGLKAQDTAELNFENAVVPAENVLGEEGAGFGYLRTNLAQERVSIAVGS 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           ++  R +      +++ R   G  L+D    +  +A +A +I +A +       +  + +
Sbjct: 259 IATSRRAFDLVYQHSQDRKTFGNRLVDHQAYRWELAKMATEIQSAQSFVDAAVEAKVKGE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
                A+ A+ +         ++   V+  A++  GG G++ E      YR
Sbjct: 319 LDEVTASMAKYLT-------TELQIKVVNTALQLHGGYGFMMEYP----YR 358


>gi|332525953|ref|ZP_08402094.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
 gi|332109504|gb|EGJ10427.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2]
          Length = 594

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 97/570 (17%), Positives = 197/570 (34%), Gaps = 72/570 (12%)

Query: 40  DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN-YNTPQLHAYGPGGERWD--K 96
           D LL   +        +         +        R+A+    P          R+D  +
Sbjct: 9   DVLLHDWLDVDTLFSRERHAEHSRETVGAVLDLAERIADERFAPANRRADVEEPRFDGER 68

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V    +  A +   +  GL  +  D  F  +      ++ A   +  A +        + 
Sbjct: 69  VHLPESTRAAVAAYVESGLLAASQDAEFGGLQLPCVAEMAANAFFSKASVAIAGYAMLTT 128

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++A   TP   + +A ++F+ E+  T             + L+E + G+ ++ + +
Sbjct: 129 GNANLIAAHGTPAQRETFARRLFAGEWFGT-------------MCLSEPQAGSSLSDVAT 175

Query: 217 QGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG--------- 254
           + +    G         Y L GHK ++S    +       ++LA++    G         
Sbjct: 176 RAEPDGPGHEADALGPRYRLRGHKMWISGGEHELAANIVHLVLAKIPDETGRLPPGVKGL 235

Query: 255 -CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVS 305
             F+ P+ L       G  N +    L +K+G R      L F        +L+G     
Sbjct: 236 SLFICPKFLPGPDGRLGRRNDVALAGLNHKLGYRGTTNTLLNFGERDGAVAWLVGRPGDG 295

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPV 354
              +  M     +   + +V         ++ YAR+R                 ++    
Sbjct: 296 LRCMFHMMNEARIAVGLGAVMLGWAGYEASLEYARQRPQGRPLGAKDATQPQVPILRHVD 355

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAP 409
           ++R +      +    ALS   A   DEA++ + EAA        ++ PI K W  +   
Sbjct: 356 VRRMLLAQKSYVEGGLALSLYCARLVDEARTGAPEAAADARRLLDLLTPIAKSWPSEWCL 415

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
              + A++ +GG GY  +  + +++R++  N I  G+     LD+L   +L  G    + 
Sbjct: 416 EANSLAIQVLGGCGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKVLADGGAALKL 475

Query: 468 LFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGLARFLTEKIALASSAAA-----LYRAG 521
           L + ++     +G+   +     +++   +  G A         A +A A     L   G
Sbjct: 476 LVTRIDATAQRAGQVAGLAEAGVALAGALQRLGAATRSAWATGDAEAATANATPYLQAFG 535

Query: 522 MNDIADVFLENRFLDNCHSTHCMLHGRFNA 551
              +A ++L+             L      
Sbjct: 536 HVVVAWLWLDLALATGASRP-GTLAATRYF 564


>gi|327403341|ref|YP_004344179.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327318849|gb|AEA43341.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 396

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 126/350 (36%), Gaps = 38/350 (10%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P         + +   +M +LE       S  S         +    T
Sbjct: 57  GLGEIGAFGPYIPEEYGGPGLDQISYGLIMQELERCDSGLRSTASVQSSLVMYPIWKYGT 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + PK+ + E                  GLTE   G+D  ++ +  + + D    
Sbjct: 117 EEQKQKYLPKLATGEMMG-------------CFGLTEPDHGSDPGSMITNFKDMGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  ++P +D  ++ A+ E      LV     +    G     +  K+  R+++T 
Sbjct: 164 NGAKMWISNAPFADIAVVWAKDETGRIHGLV----VERGMEGFSTPEMHGKLSLRASSTG 219

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR 342
           EL F N         N+  G       L  LDSA   ++   +  A     +A+ Y++ R
Sbjct: 220 ELIFVNVKVP---KENLLPGRSGLGAPLSCLDSARFGIAWGALGAAMDCYDQALRYSKER 276

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + ++ +A++  +I  A  ++ R+    +E ++ S        M  + K 
Sbjct: 277 TQFGVPIGAFQLTQKKLAEMITEITKAQFITLRVGELRNEGRATS-------SMISMIKR 329

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              ++A  +  EA +  GG G   E S+ RH     +     G+ +  +L
Sbjct: 330 NNVEIALNIAREARQIHGGMGITSEYSMMRHMANLESVVTYEGTHDIHLL 379


>gi|219123841|ref|XP_002182225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406186|gb|EEC46126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 437

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 33/308 (10%)

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISD 223
             +      W P I +              +V  G+ ++E   GTD+  + +        
Sbjct: 144 NGSEAQKSRWLPDICAG-------------TVVGGMCMSEPNAGTDVLGMKTNATAIEGG 190

Query: 224 GIYCLSGHKWFLSSPM------SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ-RLK 276
           G + L+G K ++++         D F++ A+         + + + + +  G     ++ 
Sbjct: 191 GGWKLNGTKMWITNGTLDGRTTGDIFLVYARTGPAKTD--LTQFVVEKNMPGFSLGQKIV 248

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G R++ T EL F +       ++G++N +T  +     +  +  A M++   R S+ 
Sbjct: 249 DKLGMRASMTAELVFEDVILSHDHVVGEVNEATLCMMRNLEIERIGLAAMALGIARRSID 308

Query: 334 EAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           E   YA  R   G   L +   ++R IA+   +  A     + +ANS D  K      A 
Sbjct: 309 EMKRYALERQAFGARNLFEFGQIQRLIAESYAEYMAGRCYVYGVANSLDLNK------AG 362

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             + A  TK +C KM+  V   A++ +GG GY+ E  + R +R++    I  G+  +   
Sbjct: 363 NGLDADGTKLYCAKMSKEVADRAIQVMGGYGYVGEYKVERLWRDAKLLEIGGGTNESHHK 422

Query: 453 DVLNLLEK 460
           ++   L K
Sbjct: 423 NMARDLRK 430


>gi|284163794|ref|YP_003402073.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013449|gb|ADB59400.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 387

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 141/399 (35%), Gaps = 44/399 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+E   +  + TP +  +   G         P    ++ +    G +    + 
Sbjct: 15  ERMIRDTAREF--VTEHVTPDIGEHFENG-------TFP--KEIIPKMGELGFYAPNLEG 63

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P V + A+ +    L                     +    +    ++W P +   E
Sbjct: 64  YSSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPALGRGE 123

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G++ +A+ ++ ++  DG        W  +SP+SD 
Sbjct: 124 -------------AVGCFGLTEPEHGSNPSAMETRAERDGDGYILNGSKTWITNSPISDV 170

Query: 243 FIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            ++ A+   +           L +   +G+   ++  K+  R++ T E+  ++       
Sbjct: 171 AVVWARDQSDPDTPVRG---FLVETDRDGVSTNKITEKLSLRASITGEIGLNDVHVP--- 224

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355
           + NV  G       L  L  A   ++   V  A     EA  YA+ R   GG +    + 
Sbjct: 225 EENVLPGVSGMKGPLSCLTQARYGIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQ 284

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R +A++   I  A  L++RLA   +  + R +  + A+           + A      A
Sbjct: 285 QRKLAEMGTQITLAQLLAYRLAELKERGEMRPQHVSMAKR-------NNVRTARDQARIA 337

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            E +GG+G   + S  RH           G+ +   L +
Sbjct: 338 REMLGGNGITTDYSPMRHMANMETVYTYEGTHDIHTLVL 376


>gi|187928530|ref|YP_001899017.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12J]
 gi|187725420|gb|ACD26585.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
          Length = 622

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 90/510 (17%), Positives = 177/510 (34%), Gaps = 84/510 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P   A L      GL  +  D     +      +      +  A +        +
Sbjct: 71  KVHIIPEVKAALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           + +A+++    TP                 T   P  +      + L+E + G+ ++ I 
Sbjct: 131 IGNANLLLAHGTPAQ-------------IETFVQPEMEGRFYGTMCLSEPQAGSSLSDIV 177

Query: 216 SQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCF 256
           ++ +          Y L+G+K ++S+   +       ++LA++ G           +  F
Sbjct: 178 TRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLF 237

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTF 295
           +VP+ L +     G  N +    L +K+G R      L F                    
Sbjct: 238 IVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAI 297

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G+ +     +  M     +   + +          A+ YAR R   G         
Sbjct: 298 GYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHAVDYARNRPQ-GRPVGPSGKD 356

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RI 395
                  ++D   ++R +      +  A  L+   A   DE +  ++ A  A       I
Sbjct: 357 AASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDAAKRAKLGLLLDI 416

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L
Sbjct: 417 LTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLL 476

Query: 456 N--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL--------RDSISLCKEDKGLARFLT 505
              ++ +    F  L   ++  +G + +     L          +  L K  + L     
Sbjct: 477 GRKVVMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGD 536

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFL 535
            ++ LA+++  L   G   +A ++LE    
Sbjct: 537 PRVTLANASVYLEAFGHVVVAWIWLEQALA 566


>gi|289613972|emb|CBI59206.1| unnamed protein product [Sordaria macrospora]
          Length = 533

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/452 (19%), Positives = 154/452 (34%), Gaps = 55/452 (12%)

Query: 16  HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75
           H+ +++L    Q   F   + Y       +  + + +  H  L            +E   
Sbjct: 113 HEETEALEPFGQLIPFADPSWY------QSYHSPYYNETHAALR--------AEIREWVE 158

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            A           P    WD+ +  PA  +  + +R    GL  + +  ++     K   
Sbjct: 159 TA---------IDPYVTEWDEKKEVPAEIYKEMGKRGYLAGLLGTKYQSNYVENPIKSVP 209

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
             +    + M   +          S   V       +     P I               
Sbjct: 210 AEKWDLFHEMLLTDELS----RTGSGGFVWNFGKKPLVDRILPGIL-------------N 252

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
               I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G 
Sbjct: 253 GDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGG 312

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
            G   V  LL +    G+  +R+ +  G  S+ T  + F +       L+G  N     +
Sbjct: 313 PGMNGVSLLLIERDFPGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENQGFRVI 371

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   +   I  +   RV   E++ YA +R   G  LI+ PV++  +A +A  I A+
Sbjct: 372 MTNFNHERIGIIIQCLRFSRVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEAS 431

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE- 426
                 L N   + +   E  A  R+   I   K            EA +  GG  Y   
Sbjct: 432 YNW---LENLIYQCEKMGETEAMLRLGGAIASLKAQATVTFEFCAREASQIFGGLSYSRG 488

Query: 427 --ERSIARHYRESPANSILLGSGNAMVLDVLN 456
                + R YR+  A +I  GS   M+   + 
Sbjct: 489 GQGGKVERLYRDVRAYAIPGGSEEIMLDLSIR 520


>gi|323170009|gb|EFZ55665.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           LT-68]
          Length = 383

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 137/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVFLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    ++++ +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQKKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|114769691|ref|ZP_01447301.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
 gi|114549396|gb|EAU52278.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255]
          Length = 404

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 136/380 (35%), Gaps = 33/380 (8%)

Query: 93  RWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
           R  +   H  +H  ++      GL  S     F  V     ++ + A  +  +       
Sbjct: 50  RIIEANRHELFHIEIMAEMGELGLLGSTIPEEFGGVGANYTSYGLVAREVERVDSGYRSA 109

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +           + PK+ + E             +    GLTE   G+D
Sbjct: 110 MSVQSSLVMHPIFAYGNDDQRTKYLPKLATGE-------------LVGCFGLTEPDHGSD 156

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ ++I  G        W  +SP++D FI+ A+ +       +   + +    GL
Sbjct: 157 PGGMLTRAKQIDGGYLISGAKNWITNSPIADVFIIWAKSDAHDNK--IKGFILERGMKGL 214

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +++ K   R++ T  ++    F     + N+             L+ A   ++   +
Sbjct: 215 ESPKIEGKFSLRASTTGMIQMDEVFVP---EENILPNISGLAGPFGCLNRARYGIAWGTM 271

Query: 331 SLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE   +A R     R   G  L    ++++ +AD+  +I+       R+   FDE K 
Sbjct: 272 GAAEFCWHAARQYTMDRKQFGRPLAQTQLIQKKLADMQTEISLGLQGCLRMGRLFDEHKV 331

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +E       +  + K   C  A  +   A +  GG+G  +E S+ RH     A +   G
Sbjct: 332 PAE-------LISLMKRNNCGKALDIARTARDMHGGNGVSDEYSVIRHVMNLEAVNTYEG 384

Query: 446 SGNAMVLDVLNLLEKGTNLF 465
           + +   L +L   + G   F
Sbjct: 385 THDIHAL-ILGRAQTGLQAF 403


>gi|332717081|ref|YP_004444547.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
 gi|325063766|gb|ADY67456.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3]
          Length = 395

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 128/368 (34%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 54  ELFRLMGRTGLLGVTLPEEYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVIHPIF 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D   + ++ +KI+ 
Sbjct: 114 AYGSDEQKKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPGGMKTRAEKIAG 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E       +   + +    GL   ++  K+  R+
Sbjct: 161 GYRLRGSKMWISNAPIADVFVVWAKSEAHD--NQIRGFVLEKGMKGLSAPKIGGKLSLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + T E+             +     V  +K     L+ A   +S   +  AE     A+ 
Sbjct: 219 SITGEIVMDGVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCWFRALQ 274

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    + ++ +AD+  +IA     S R+    DE K        A  M 
Sbjct: 275 YGLDRKQFGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHK-------MAPEMI 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L  
Sbjct: 328 SIIKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-ILGR 386

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 387 AQTGIQAF 394


>gi|302540543|ref|ZP_07292885.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458161|gb|EFL21254.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 385

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 132/386 (34%), Gaps = 35/386 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L  +    ER D+V   PA    + R+++  GL+ +                    R  
Sbjct: 23  ELEPHEDEVERLDEV--PPALAERIRRKALDAGLYAANMPEELGGGGLDATSMTLVERE- 79

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                    L         +VA  +               E       P  +      L 
Sbjct: 80  ---------LGRTGYALQMLVARPSNILQA-------CEGEQRERYLLPTIRGERHDCLA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL---- 257
           +TE   G+D+ ++T++  +  D  Y ++G K F+S   +  F++L    G  G       
Sbjct: 124 MTEPGAGSDVRSMTTRAVRDGD-TYVINGTKHFISHADAADFVILFATTGATGPTTGKNP 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KI 314
           +   L D    GL   R    + +R     EL F++      G L       + M     
Sbjct: 183 ITAFLVDLDTPGLTVTRGSAAVSHRGYHQCELSFTDCRIPAGGRLGEEGRGFDLMAEWLG 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  SV   R  L  A  +A  R   G  +     +   +AD+A ++ AA  L+ 
Sbjct: 243 ASRLSVAATSVGRARRVLDLATGWAAERRQFGQTIGRFQGVSFPLADMATELEAAELLTM 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D+      +AA A       K +  +    +   A++  GG G + E  I R +
Sbjct: 303 RAAWKLDQGTMTDRDAAMA-------KLYASEALGRITDRAVQIFGGMGLMAELPIERFW 355

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+       +   L +
Sbjct: 356 RDARVERIWDGTSEIQRHIISRSLLR 381


>gi|145543779|ref|XP_001457575.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425392|emb|CAK90178.1| unnamed protein product [Paramecium tetraurelia]
          Length = 414

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 139/399 (34%), Gaps = 39/399 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           NY   +L        R  K  F P  +  + +    G   S +D S    V   A+ +  
Sbjct: 51  NYAQSELQPRIQEAYR--KEHFDPQIYKEMGKLGFLGCTISEYDLSG---VSYTAYGLIN 105

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +  +       L   S      +    +  +   + PK+ S E+              
Sbjct: 106 KEIERVDSGYRSALSVQSSLVIHPIYQFGSKELKDKYIPKLASGEF-------------V 152

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256
              GLTE   G+D  ++ S  +K  D  Y L+G K W  +SP++D F++ A+ E      
Sbjct: 153 GAFGLTEPDHGSDPGSMKSHAKKK-DNYYILNGTKSWITNSPIADVFVVWAKDEKGD--- 208

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD---LNVSTGPVEDMK 313
            +   + +    GL   +++ K+  RS+ T ++   N           +    GP   + 
Sbjct: 209 -IRGFVLEKGMKGLSTPKIEGKLSLRSSITGQIIMDNVKVPQENMFTTVKGLKGPFSCLN 267

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A  ++            YA  R      L    ++++  A++  DIA A    
Sbjct: 268 N-ARFGIAWGTLGAAEFCFHHTRQYALDRKQFDANLASFQLIQKKFAEMTTDIALAQQAV 326

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +++   +  +        A     + K   C +A  +  E  + +GG+G  +E  + RH
Sbjct: 327 LQVSRLKENDQ-------LATEQVSLIKRNSCGIALKIARECRDILGGNGISDEYQVIRH 379

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
                  +   G+ +   L    +L +G    +     L
Sbjct: 380 MVNLETVNTYEGASDIHAL----ILGRGITGIQAFSRAL 414


>gi|115372054|ref|ZP_01459366.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115371019|gb|EAU69942.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 539

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/496 (17%), Positives = 172/496 (34%), Gaps = 58/496 (11%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R  +V  HP    L  + +  GL  +                  A+   + A L A   +
Sbjct: 10  RDGRVHAHPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYV 69

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++ +A ++    TP + + +  +++  E+  T             + LTE + G+ + 
Sbjct: 70  GLTIGAAHLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLG 116

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            + ++     DG Y +SG K F+S    D       + LA++EG       +  F VP  
Sbjct: 117 DVKARAFPAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSR 176

Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKIL 315
             +G     N +    + +KIG R   ++ L +    +  G+L+G+ N     +  M   
Sbjct: 177 RPEGDRLVDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNE 236

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIAL 364
             +   +  V+   V+  EA+ YAR R                 +I+   ++R +     
Sbjct: 237 ARIMVGLNGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKA 296

Query: 365 DIA------AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +       AAT++   LA    + ++R        ++ P+ K +  +        A++ 
Sbjct: 297 IVEGGLSLLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQV 356

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL 476
            GG GY  E       R+   NSI  G+     LD+L   ++  G    +     +   +
Sbjct: 357 HGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAAGGAALQAFSEEVLATV 416

Query: 477 GSSGKKVITILR-DSISLCKEDKGLARFLTEKIALASSAAALYRAGMN--------DIAD 527
             + +  +      ++    E           + +A     + R   +         +A 
Sbjct: 417 ARARQAGVHGPWCAAMEASLEAVLELTMSLGAMGMAGEVEQMLRHSADYMELFSILAVAW 476

Query: 528 VFLENRFLDNCHSTHC 543
            +L             
Sbjct: 477 RWLAQAAAAREGLAKG 492


>gi|226364663|ref|YP_002782445.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243152|dbj|BAH53500.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 611

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 96/511 (18%), Positives = 187/511 (36%), Gaps = 71/511 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       V    ++    R       +      
Sbjct: 46  ARLAEGPLGESFADADRNPPV---FDPENH---TVTLPESFKKSFRALWDAEWYRMGISE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               V   ++       L L AQ  A H+       A ++    T    K WA  I  R 
Sbjct: 100 EIGGVPVPRSVVWAIGELILGAQPAA-HMYQAGPAFADVLFNNGTEEQKK-WAATIVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S  SD 
Sbjct: 158 WGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSDD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+        E G  NG     +++K+G + +
Sbjct: 205 LFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETNEFGERNGAFVTNVEHKMGLKVS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           AT E+ F        G+L+G+++     + D+     +     +++ +      A+ YA+
Sbjct: 265 ATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALEYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            R                  +   P ++RA+A          A+    A   DEA ++  
Sbjct: 325 ERVQGADLTQMTDKAAPRVTITHHPDVRRALAMQKAYAEGLRAVYLYTAAHQDEATAKLV 384

Query: 389 EAAYARI-------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             A   +       + PI K    + A   + ++++  GGSG++++  I ++ R++  +S
Sbjct: 385 SGADKDLAFRVNDLLLPIVKGVGSERAYQYLTDSLQTFGGSGFLQDYPIEQYIRDAKIDS 444

Query: 442 ILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  G+      D        ++G  L     ++   ++ + G+   K    L    +  +
Sbjct: 445 LYEGTTAIQAQDFFFRKIARDRGVALAHVAGEVKKFIDTEAGNGRLKAERAL--LATALE 502

Query: 496 EDKGLARFLTEK-IALASSAAALYRAGMNDI 525
           + + +A  LT   +      + LY+ G+  +
Sbjct: 503 DVQTMAATLTGYLMGAQEQPSELYKVGLGSV 533


>gi|255937167|ref|XP_002559610.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584230|emb|CAP92262.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 605

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 202/539 (37%), Gaps = 94/539 (17%)

Query: 35  NAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y+SD  L  ++  +        +   L  LGE  +S         A  N P +  Y  
Sbjct: 24  NTYTSDISLQRMLGWYLPAQTLKLIEPHLAQLGEEAVSPQVFAWNADAETNLPYVKKYNV 83

Query: 90  GGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            G+R+  D++     W  L +     G+    +D ++    R      + A +YL A   
Sbjct: 84  WGQRYAYDRLVTTDGWKQLGKWGAKHGVVSLGYDHTYGVYRR----TAQYAAVYLYAPSS 139

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A +    S++                                     ++  G  +TE+ G
Sbjct: 140 AMYRCPMSMSDG----------------------------------AALTSGQWMTERAG 165

Query: 208 GTDIAAITSQGQ--------KISD----GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254
           G+D+    +           K SD    G Y +SG K+F S+  ++   +LA+ + G++ 
Sbjct: 166 GSDVQNTETWATYAPLPQESKTSDVLAEGDYLISGFKFFSSATDANVAFLLAKTDSGKLS 225

Query: 255 CFLVPRLL--------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            F+ P            + + NG+   R KNK+G +   T ELE       L+G+L+   
Sbjct: 226 TFIAPLRKTSIGADGKPEETSNGVRIHRFKNKLGTKELPTAELELKGMRAHLVGELDQGI 285

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +  +     + + + ++S  R +++   ++A+ R   G  L   P+  R +AD+ +  
Sbjct: 286 VTIAPLLNTTRIQTLLGTLSTWRRAISITKNFAKSRTTVGEPLWLIPMHLRLLADVEVKH 345

Query: 367 AAATALSFRL-------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
             A  L+F               A      +  +E     R++   +K    KM+   + 
Sbjct: 346 RGAINLAFFTIAVMGLIENPSSPARHAHMPRDPTEAKVVFRVLTATSKGVVSKMSMVGVQ 405

Query: 414 EAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL---- 464
           E  E IGG GYI+     E +I+R  R +    I  G+ N +  +++  L KG NL    
Sbjct: 406 ECQEAIGGVGYIDEPDEPEFNISRLLRSAAVYPIWEGTTNVLASELVRFLMKGDNLSILS 465

Query: 465 --FEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDKGL---ARFLTEKIALASSAAAL 517
                + S +    L  + K+ +      ++  +    L   AR +    A   S A L
Sbjct: 466 GWLGHVVSLIRTPSLAGALKQAMASYLSRVTSTRPQAALLADARRVMFTFAWILSGALL 524


>gi|218779015|ref|YP_002430333.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760399|gb|ACL02865.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 127/352 (36%), Gaps = 31/352 (8%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL---MSPSVTSASMVALMTTPRVH 171
           L        +          + AA  +     +        S    +A  +  + +    
Sbjct: 50  LTGLCLPEQYGGAGADALTTVIAAIAFARGSFDGSMCTVWGSHLFLAAMSICDLGSEEQK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P + + E                 L LTE   GTD  ++ +   +  D  Y L+G 
Sbjct: 110 ERYLPGMATGE-------------RIGALALTEPEAGTDATSLATTAVRDGD-YYILNGS 155

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K F+S+ P++D F+  A ++       +   + +    GL       K   +S  T E+ 
Sbjct: 156 KTFISNAPIADVFVTYATMDISKRAGGITGFIVERDTPGLTCGPPMRKHFGKSTPTGEMF 215

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS----VSGMRVSLAEAIHYARRRHVSG 346
           F++        L         M  +  L    ++    V  M   L   I YA+ R   G
Sbjct: 216 FNDAKIPAENLLGKEGEGFTAM--IASLGWERLAFAPIVGLMEAELDLCIDYAKTRKQFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    +++  +A++ +D+ A+  L+  LA   D+      +AA       I K +  +
Sbjct: 274 KPVGKFQLVQAMLAEMKMDLEASRYLALSLAWKKDQGIYNPIDAA-------IAKTFITE 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A     +A++  GG G ++E    R++  +   +I  G+     + +  LL
Sbjct: 327 AAERNSRKAVQIHGGMGCMQECKAGRNFWSAKTAAIGGGTSQIQRVLIGRLL 378


>gi|239917215|ref|YP_002956773.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838422|gb|ACS30219.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 395

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            VLS T +E A       P                 H   + ++ +    GL    +   
Sbjct: 16  QVLSDTVREFADEV--VAPVSAELDA---------KHEFPYEIVAQMGEMGLFGLPFPEE 64

Query: 124 FEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +  +         A   L  + Q  A  L +     A  +    T    + W P + +  
Sbjct: 65  YGGMGGDYFALALALEQLGRVNQSVAITLEAGVSLGAMPLLKFGTEEQKQRWLPDLVAGT 124

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +               G GLTE   G+D     +    + DG + ++G K F+++  +D 
Sbjct: 125 H-------------LAGFGLTEPGAGSDAGGTQTTA-ALEDGQWRINGAKEFITNSGTDI 170

Query: 243 ---FIMLAQV---EGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
                + A     EGR G        +  +L      G    +  +K+G  S+ T  L F
Sbjct: 171 TSLITVTAVTGTVEGRTGHDGRPAKEISTILVPAGTEGFSVAKAYDKVGWNSSDTHALHF 230

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSG 346
           ++        L        +   L  LD   ++++ +     +  + E++ YA++R   G
Sbjct: 231 TDARVPEENLLGARGRGFANF--LEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFG 288

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   IA +     AA    +  A      K    EAA A+++A        +
Sbjct: 289 QKIGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIAG-------E 341

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A     +A +  GG G++ E  +ARHYR+S    +  G+    ++ +   L
Sbjct: 342 AAMDNARDATQVFGGYGFMNETLVARHYRDSKILEVGEGTTEVQLMLIAREL 393


>gi|114567447|ref|YP_754601.1| hypothetical protein Swol_1933 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338382|gb|ABI69230.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 610

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/494 (17%), Positives = 173/494 (35%), Gaps = 75/494 (15%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G     V     +          GL     DRS E        +     +   A      
Sbjct: 72  GGDTQAVITPEVFKNAYNTVCEAGLGPQFSDRSAEG-RMPLVWEAPILEMQSGASPSIVM 130

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  + +++    +  + + + PK++S E+  T             +GLTE   G++
Sbjct: 131 FWCLTAGACTVIQHNASEELKERFLPKMYSGEWGGT-------------MGLTEPGAGSE 177

Query: 211 IAAITSQGQKISD-GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           + A+ ++       G+Y + G K F++S   D       ++LA+          + C +V
Sbjct: 178 VGAVATKCFPTDTPGLYKIKGQKCFITSGDHDLASNIIHLVLAKTPDAKPGTSGINCLIV 237

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD-----LNVS 305
           P+   +     G+ N +    +++K+G   ++T+ L F    N +G+++GD         
Sbjct: 238 PKFWVNEDGTQGAWNDVTSTGIEHKMGIHGSSTLSLSFGENDNCYGWMIGDGPVDGRGKG 297

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMK 356
              +  M     L++   +   +  +   A+ Y + R  S            +I+   ++
Sbjct: 298 MAQMFQMMNEERLNTGTFAQGCIGSAYYAALDYCKMRVQSPKFTDPKGPSVRIIEHEDVR 357

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPA 410
           R +      + A  AL +      D +   ++ A          I  P+ K +   MA  
Sbjct: 358 RMLLFQKSIMEACRALLYTTYFYQDLSHDAADPAEREYYDDMTMIQIPLCKAYVSDMAWI 417

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG---TNL 464
              +A++C+GG G+IEE + A   R+    S+  G+      D  N    ++KG      
Sbjct: 418 STEQAIQCLGGYGFIEEYAPAELARDCKIYSLWEGTNFIQAQDFNNRKTTMKKGEPMKKW 477

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
             Q+   L      +      ++ D+ S   E                S    +RA    
Sbjct: 478 VAQIADFLATKKDPAFADEFAMMDDAFSAYNEI--------------LSTKEAWRASNPQ 523

Query: 525 IADVFLENRFLDNC 538
           +  +F   R L   
Sbjct: 524 LVQLF-ATRMLHAA 536


>gi|326388422|ref|ZP_08210018.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207154|gb|EGD57975.1| butyryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 378

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 115/358 (32%), Gaps = 24/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H  LR     GL        +                   A       ++    +   + 
Sbjct: 39  HDQLRLLAEMGLMGMNLPERWGGPGLSALALADCVTAIAAACGSTVSALTAHFLATDAIL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L     +   + P                         LTE R G++ A +  +   +  
Sbjct: 99  LGGGDDLRGRYLPD-------------AAAGRTLGAFALTEPRAGSNPADMGCRAVPVEG 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        +  +   +D  ++ A  +       +   + D    GL     +  +G R 
Sbjct: 146 GYRLTGTKHFISNGGHADFIVVFAVTDPEAAHRGISAFVVDRDTPGLVVGAPEKTMGLRG 205

Query: 284 NATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
               EL F +        +    +G    MK+L    ++ A M +     +L  A  + R
Sbjct: 206 GHVFELAF-DCLVPAGNRVGAEGSGFRTAMKVLDNGRIEVAAMCLGLAGAALDAARDWVR 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R + G +L D   ++  +AD+A  + AA  L+   A      +  + ++A A       
Sbjct: 265 QRKIGGQLLGDYQGIQWMLADMATQLQAARLLTRDAAAKRAAGERFTRQSAMA------- 317

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V   A++  GG GYI +  + R+ R+     I  GS       +   L
Sbjct: 318 KLFASETAGKVADAALQIHGGYGYIRDLPLERYVRDLRIMRIYEGSSEVQRNIIARDL 375


>gi|254820427|ref|ZP_05225428.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 611

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 97/526 (18%), Positives = 195/526 (37%), Gaps = 83/526 (15%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              ++ L  +        A       + N P    + P       V    ++   +   I
Sbjct: 36  DTANEMLNEMSRLAEGPIADSFVE-GDRNPPV---FDPKTH---SVTLPESFKKSVHAVI 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D +   V   ++  + A   +++    A  + +     A+++  + T    
Sbjct: 89  EAGWDKVGIDEALGGVAMPKS-LLWALHEHILGANPAVWMYAGGAGFANILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  K  DG + + G 
Sbjct: 148 K-WAVLAAERGWGST-------------MVLTEPDAGSDVGAGRTKAVKQDDGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  F VP+ L D      G  NG+   
Sbjct: 194 KRFITSADSGDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + D+     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELSFGQHDVPAKGWLVGEVHNGIAQMFDVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    +
Sbjct: 314 TGYLNALEYAKSRVQGADMTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLFTS 373

Query: 378 NSFDEAKSRS---EEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D + + +    +A  A      M P+ K    + A A + E+++  GGSG++++  I
Sbjct: 374 TYQDASVAEALHGVDAELAVKVNDLMLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            ++ R++  +S+  G+      D               F  + +D G +   V   ++  
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDF-------------FFRKIVRDKGVALAHVSEQIQKF 480

Query: 491 IS-------LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529
           +        L  E + LA+ LT+  A+A+S      A   D+  ++
Sbjct: 481 VDSESGNGRLKTEREYLAKALTDVQAMATSLTGYLMAAQEDVTSLY 526


>gi|15607385|ref|NP_214758.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium tuberculosis H37Rv]
 gi|15839625|ref|NP_334662.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148660009|ref|YP_001281532.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra]
 gi|148821438|ref|YP_001286192.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11]
 gi|167968966|ref|ZP_02551243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis H37Ra]
 gi|215406242|ref|ZP_03418423.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|215409734|ref|ZP_03418542.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 94_M4241A]
 gi|215448531|ref|ZP_03435283.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|218755985|ref|ZP_03534781.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|219556043|ref|ZP_03535119.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|254233622|ref|ZP_04926948.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C]
 gi|254366690|ref|ZP_04982734.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549185|ref|ZP_05139632.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185108|ref|ZP_05762582.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|260199242|ref|ZP_05766733.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|260203389|ref|ZP_05770880.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289441621|ref|ZP_06431365.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|289445777|ref|ZP_06435521.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|289568148|ref|ZP_06448375.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|289572823|ref|ZP_06453050.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289748014|ref|ZP_06507392.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|289760350|ref|ZP_06519728.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|289764361|ref|ZP_06523739.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|294994719|ref|ZP_06800410.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 210]
 gi|298523712|ref|ZP_07011121.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774335|ref|ZP_07412672.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001]
 gi|306779077|ref|ZP_07417414.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002]
 gi|306782866|ref|ZP_07421188.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003]
 gi|306787234|ref|ZP_07425556.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004]
 gi|306791790|ref|ZP_07430092.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005]
 gi|306795832|ref|ZP_07434134.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006]
 gi|306801830|ref|ZP_07438498.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008]
 gi|306806041|ref|ZP_07442709.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007]
 gi|306970437|ref|ZP_07483098.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009]
 gi|306974668|ref|ZP_07487329.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010]
 gi|307082377|ref|ZP_07491547.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011]
 gi|307082720|ref|ZP_07491833.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012]
 gi|2909448|emb|CAA17336.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE5 [Mycobacterium tuberculosis
           H37Rv]
 gi|13879743|gb|AAK44476.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|124603415|gb|EAY61690.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C]
 gi|134152202|gb|EBA44247.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504161|gb|ABQ71970.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra]
 gi|148719965|gb|ABR04590.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11]
 gi|289414540|gb|EFD11780.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46]
 gi|289418735|gb|EFD15936.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A]
 gi|289537254|gb|EFD41832.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85]
 gi|289541901|gb|EFD45550.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17]
 gi|289688542|gb|EFD56030.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987]
 gi|289711867|gb|EFD75883.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503]
 gi|289715914|gb|EFD79926.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85]
 gi|298493506|gb|EFI28800.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308217167|gb|EFO76566.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001]
 gi|308327926|gb|EFP16777.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002]
 gi|308332385|gb|EFP21236.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003]
 gi|308336136|gb|EFP24987.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004]
 gi|308339768|gb|EFP28619.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005]
 gi|308343773|gb|EFP32624.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006]
 gi|308347493|gb|EFP36344.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007]
 gi|308351392|gb|EFP40243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008]
 gi|308352120|gb|EFP40971.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009]
 gi|308356070|gb|EFP44921.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010]
 gi|308360025|gb|EFP48876.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011]
 gi|308367590|gb|EFP56441.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012]
 gi|323717235|gb|EGB26444.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CDC1551A]
 gi|326906000|gb|EGE52933.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis W-148]
          Length = 611

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/520 (17%), Positives = 193/520 (37%), Gaps = 68/520 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
                 L  +        A+      + N P    + P       V    ++   +   +
Sbjct: 36  DTARDMLAEVSRLAEGPVAESFVE-GDRNPPV---FDPKTH---SVMLPESFKKSVNAML 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D +   +   +A  + A   +++    A  + +     A ++  + T    
Sbjct: 89  EAGWDKVGIDEALGGMPMPKA-VVWALHEHILGANPAVWMYAGGAGFAQILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 148 K-WAVLAAERGWGST-------------MVLTEPDAGSDVGAARTKAVQQADGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  + VP+ L      E G  NG+   
Sbjct: 194 KRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFDVETGEPGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALQYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKS---RSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A +      +A  A      M P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 374 TFQDAAVAEVVHGVDAKLAVKVNDLMLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITI 486
            ++ R++  +S+  G+      D     ++         +   +++  D G+   ++ T 
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQEFVDSGAGNGRLKTE 493

Query: 487 LRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
                    + +G+A  LT  +  A     +LY+ G+  +
Sbjct: 494 RALLAKALTDVQGMAAALTGYLMAAQQDVTSLYKVGLGSV 533


>gi|257057280|ref|YP_003135112.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587152|gb|ACU98285.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 389

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 113/364 (31%), Gaps = 39/364 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +++   G         +  +              L A+L    +      SA  +  
Sbjct: 49  ELQQKAKASGFWGVQTPEEYGGMGLSAVMTA-----LLEAELGRTFVPFSFGGSADNILF 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  K +               P  + +      +TE   G+D  AI +  +K    
Sbjct: 104 HANEEQKKRYL-------------LPTIEGTRKSCFAITEPGAGSDAKAIRTTARKDGSD 150

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            + ++G K F++    +D  ++ A  +   G    V   L D            + +G  
Sbjct: 151 -WVINGEKTFITGGNEADFAMVFAVTDPEKGADGGVTCFLVDRDMG--WRSEYIDTMGEW 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIH 337
             A+  L F N        L            + ++          ++      L+ AI 
Sbjct: 208 GPAS--LIFDNVRVPESQILGELGQGF--ALAMQWIGRGRYILPARALGSCERLLSMAIE 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A  R   G  L ++  ++  IAD  ++I A   L    A   D+               
Sbjct: 264 HANTRETFGAPLAERQAIQWMIADSGVEIEALRWLVLHAAWQVDQGMDSRHAQ------- 316

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +  + A  ++   ++  GG GY  E  I R YRE     I  G+       +   
Sbjct: 317 SIAKLYGGQKANEIVDRVLQIHGGMGYTRELPIERWYRELRLLRIYEGTDEIQRRTIARN 376

Query: 458 LEKG 461
           L KG
Sbjct: 377 LLKG 380


>gi|304404756|ref|ZP_07386417.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346563|gb|EFM12396.1| acyl-CoA dehydrogenase domain protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 392

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 119/373 (31%), Gaps = 39/373 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            L++R     L      R +          I A           G ++S   +  ++ + 
Sbjct: 42  DLVKRMAALELMGIPVPRKWGGAGADFIAYIAAIHEIAKVSAAVGVILSVHTSVGTLPIV 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     + A K+ + ++                  LTE   G+D A+I ++  K  D
Sbjct: 102 YYGTEEQRNEQARKLAAGQW-------------LGAFALTEPHAGSDAASIRTRAVKDGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    +  ++  +D +I  A  +   G   +   L +    G    + + K+G   
Sbjct: 149 EYLLNGTKMFITNAGAADLYITFAVTDPSRGPGGITAFLLERGVQGFIVGKKEKKMGLHG 208

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T EL F +        L          K    LD   + ++   + +AEA     +  
Sbjct: 209 SNTCELRFEDVRIPASQRLGEEGQGFAIAKG--SLDGGRIGIAAQSLGIAEAALQLIQSA 266

Query: 342 ------RHVSGGILIDQPVMKRA--------IADIALDIAAATALSFRLANSFDEAKSRS 387
                        LI     +          +A++   + AA  L +R A    E    +
Sbjct: 267 ICPTLPNRARSTPLIRSVHHRHKSISAEMAELAELTAQVEAARLLVYRAAFLRQEGLPCT 326

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +E+          K +    A  V   A+  +G  GY +     R +R++    I  G+ 
Sbjct: 327 KES-------STAKLFASDTAVEVAGAAVRLLGMKGYTKASPAERLFRDAKVTQIYEGTN 379

Query: 448 NAMVLDVLNLLEK 460
               + + N L +
Sbjct: 380 EIHRIVIGNQLLR 392


>gi|226361430|ref|YP_002779208.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239915|dbj|BAH50263.1| putative glutaryl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 120/360 (33%), Gaps = 33/360 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       G+     +      +   A+ +    L  +       +      +   + 
Sbjct: 52  RELAEGLGELGVLGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P+             M         GLTE   G++ A + +  ++  D
Sbjct: 112 HYGSEDQKQEWLPR-------------MAAGKAIGCFGLTEPDFGSNPAGMRTNAKRDGD 158

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  +  F+VP         G     +K+K+  R+
Sbjct: 159 DWILNGTKMWITNGSVADVAVVWARTDDGIRGFVVPT-----DTPGFSAPEIKHKMSLRA 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +        L  + G       L  L+ A   +        R  L  AI Y
Sbjct: 214 SVTSELVLEDVRLPESAMLPEAKGLS---GPLGCLNEARFGIIFGAMGAARDCLESAISY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R V    L    + +  IAD+AL++     L++ L    D  ++RSE+         
Sbjct: 271 AQDRQVFDKSLAAYQITQVKIADMALEVGKGHLLAYHLGRLKDRGEARSEQ-------VS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A A+  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 324 TGKLNNVREAIAIARECRTILGANGITLEYPVIRHANNLESVLTYEGTSEVHQLVIGKAL 383


>gi|117621521|ref|YP_855791.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562928|gb|ABK39876.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 391

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 141/407 (34%), Gaps = 42/407 (10%)

Query: 68  CTAQELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              + L R A  +Y   +L        R ++ +       ++      GL  +     + 
Sbjct: 19  GEEERLIRDAARDYCQARLMPRVLEANRREQFD-----RTIMNELGELGLLGATLPEQYG 73

Query: 126 -PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
              V   A+ + A  +  +       +   S      +         + W P +   E  
Sbjct: 74  CAGVNHVAYGLIAREVERVDSGYRSAMSVQSSLVMHPIHAYGDEAQRQRWLPGLARGE-- 131

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                      +    GLTE   G+D  ++ S+ +++  G        W  +SP++D F+
Sbjct: 132 -----------LVGCFGLTEPDAGSDPGSMKSRAERVDGGYLLTGNKMWITNSPIADLFV 180

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+++G +  F++     +    GL   +++ K   R++ T E+     F     + N 
Sbjct: 181 VWAKLDGEITGFVL-----EKGMAGLSAPKIEGKFSLRASITGEIVMERVFVP---EANR 232

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359
             G          L+ A   ++   +  AE   +A R     R   G  L    + +  +
Sbjct: 233 LAGVSGLKGPFGCLNKARYGIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKL 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  +IA       +     DE +   E       +  + K   C  A  +   A +  
Sbjct: 293 ANMQTEIALGLQGCLQAGRLMDEGRCPVE-------LVSLIKRNSCGKALEIARVARDMH 345

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           GG+G  +E  + RH     A +   G+ +   L +L   +     FE
Sbjct: 346 GGNGISDEFHVIRHVMNLEAVNTYEGTHDIHAL-ILGRAQTDLQAFE 391


>gi|300790996|ref|YP_003771287.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299800510|gb|ADJ50885.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 611

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 184/531 (34%), Gaps = 93/531 (17%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE---------LELLGEYVLSCTAQELARMANYNTPQL 84
            N +     ++ +       V  E         L  L +      A+  A  A+ N P  
Sbjct: 13  FNLFE----VLGVQERLGKGVLAESDEETARGVLSELNKLATGPLAESFA-DADRNPPV- 66

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             Y P   +   V+   ++    ++ +                      +  A+ L L A
Sbjct: 67  --YDP---KTFSVKIPESFKKSYKQLLDGEWWRLGLTNDLGGFGLPPTVQWAASELILGA 121

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  ++     A +V    T      WA  +  R +  T             + LTE
Sbjct: 122 NAPLFMYLAGP-NFAMIVNKNGTEEQK-HWAQLMIDRAWGAT-------------MVLTE 166

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG-------- 251
              G+D+ A  ++  K  DG + + G K F++S   D       ++LA+ EG        
Sbjct: 167 PDAGSDVGAGRTKATKQEDGSWHIDGVKRFITSAEHDMSENIMHLVLARPEGPGIETKPG 226

Query: 252 --RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299
              +  FLVP+   D      G  NG     +++K+G +++ T EL F        G+LL
Sbjct: 227 TKGLSLFLVPKFHFDSKTGELGERNGAYVTNVEHKMGIKASTTCELTFGQHGTPAKGWLL 286

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347
           G+++     +  +     +     +++ +      A+ YA+ R                 
Sbjct: 287 GEVHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKERVQGADLPNMLNKAAPRV 346

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI----MAPITKYW 403
            +   P ++R++           A+    A+  D+  +   +   A      + PI K  
Sbjct: 347 TITHHPDVRRSLMLQKAYAEGLRAVYLYTASFQDQLWTGEGDQKLAHGVNDLLLPIVKGV 406

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             + A   + ++++ +GGSG++++  I ++ R++  +S+  G+     LD          
Sbjct: 407 GSERATEQLVQSLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQSLDF--------- 457

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
                F  + +D G S   V   +       + + G  R   E+  L   A
Sbjct: 458 ----FFRKIVRDKGQSLAFVAGEIT---KFIESEAGNGRLKNER-GLLKQA 500


>gi|254480236|ref|ZP_05093484.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039798|gb|EEB80457.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 386

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 132/364 (36%), Gaps = 34/364 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASM 161
               +++   G    IW       V     +     +   A++     ++   S    + 
Sbjct: 38  REAFKKAGDRGFL-MIWPDEQYGGVGDTDFRFEQIIIEETARVGCASWLNTLHSRLVGNY 96

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +         + + P   + E               + + +TE   G+D+A + +   + 
Sbjct: 97  IQHFGNDEQKQRFLPGCITGE-------------KILAIAMTEPDAGSDLAGMRTTLCED 143

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            +    LSG K ++S+ ++  ++++A + +       +   + +    G    R  +K+G
Sbjct: 144 ENHF-ILSGSKTYISNGINADYVVVAGKSDPENNPHAMTLCIVERGMEGFERGRNLDKMG 202

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
            ++  T EL FSN     +   N+   P      L+       L +A+ S++  R +   
Sbjct: 203 MKAQDTAELFFSNVK---IPKENILGEPGNGFFYLMQGLAEERLIAAVGSIATARRAFNL 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
              +   R V G  L      +  +A++  +I         L    +E +  +       
Sbjct: 260 TREFVMERQVFGKPLSYMQNTQFKMAEMDAEIEILEIFIDHLVAEHNEERLTA------- 312

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            MA   K    ++   ++   ++  GG+GY++E  I   + ++  N IL GS   M L +
Sbjct: 313 NMAAKAKLQSTEIEWKMLDLGVQLHGGAGYMKEYPICNMFTDARINRILAGSSEIMKLII 372

Query: 455 LNLL 458
              +
Sbjct: 373 SRDI 376


>gi|171057878|ref|YP_001790227.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170775323|gb|ACB33462.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6]
          Length = 394

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 127/369 (34%), Gaps = 42/369 (11%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
             PA    +      GL  +    ++             AR           +MS  S  
Sbjct: 53  TDPAIFREMG---ELGLLGATIPEAYGGAGLNYVCYGLVAREVERVDSGYRSMMSVQSSL 109

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +         + + PK+   E+                 GLTE   G+D  ++ ++
Sbjct: 110 VMVPINEFGNEATKQKYLPKLARGEW-------------IGCFGLTEPNHGSDPGSMITR 156

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+  G        W  +SP++D F++ A+ +       +   + +    GL    +  
Sbjct: 157 AKKVPGGYSLSGAKMWITNSPIADVFVVWAKDDEGA----IRGFVLEKGWKGLSAPAIHG 212

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R++ T E+     F        D+    GP         L+SA   ++   +  AE
Sbjct: 213 KVGLRASITGEIVMDEVFCPEENAFPDVRGLKGP------FTCLNSARYGIAWGALGAAE 266

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y   R   G  L    ++++ +AD+  DI+       RL    DE  +  E 
Sbjct: 267 DCFQRARQYTMDRKQFGKPLAANQLIQKKLADMLTDISLGLQGCLRLGRMKDEGSASVE- 325

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 +  I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ + 
Sbjct: 326 ------VTSIMKRNSCGKALDIARVARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDV 379

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 380 HALILGRAI 388


>gi|145590658|ref|YP_001152660.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           arsenaticum DSM 13514]
 gi|145282426|gb|ABP50008.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum arsenaticum DSM
           13514]
          Length = 378

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 129/377 (34%), Gaps = 29/377 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK E+      LLR+     L  S   +            I        A    
Sbjct: 23  PKARSIDKGEYP---RQLLRQLGKMNLLASTLPQDVGGAGADTLTHILIVEELARASPSL 79

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +M   S   A  +         ++  PK+ S E                   L+E   
Sbjct: 80  ATIMEVQSSMLAENLYHNGNKVHREEVVPKLASGE-------------AVGAFTLSEPCC 126

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D AAI ++ +K            W  S   +D F++ A+          +   L   S
Sbjct: 127 GSDAAAIVTRAEKRGGEWVINGTKTWITSGLYADYFLLFARTGSLEARHKAITAFLLRRS 186

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
            N +    ++  +G R   T E++ ++       ++G++N           +  L+   +
Sbjct: 187 -NCIETTPIE-VMGVRGTGTAEVKLNDCRAGDDDVVGEVNGGWKIAMWGINMGRLNVGTI 244

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +     +  EA  YA++R   G  + +  V++  +A++   +    +  +  A   D  
Sbjct: 245 GLGIAEEAFYEAYSYAKKRVAFGKTIAEFQVIQHYLAEMYARVEMLRSFIYSTAKMKDSG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                      + A + K    + A  V+  A++  GG GY ++  +   YR++ A  I 
Sbjct: 305 DPN------FPLYAQVAKLMGSRTAVDVVRLAVQIQGGYGYSKDSHLEMLYRDAKATEIY 358

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   ++  +   + +
Sbjct: 359 EGANEIILNTIYKFMRE 375


>gi|148259868|ref|YP_001233995.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|326403204|ref|YP_004283285.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|146401549|gb|ABQ30076.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
 gi|325050065|dbj|BAJ80403.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 408

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 131/367 (35%), Gaps = 33/367 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++      G   +         V   A+ + A  +  +           S      + 
Sbjct: 70  RSIMSEMGEMGFLGATLSTHGCADVSYVAYGLIAREVERVDSGYRSAFSVQSSLVMYPIY 129

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 130 AFGSEAQKDKYLPKLRAGEW-------------VGCFGLTEPDAGSDPGSMRTRAKKVDG 176

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D  ++ A+ +  V    +   L D    GL   +++ K   R+
Sbjct: 177 GYILNGSKTWISNSPIADVCLVWAKDDEGV----IRGFLVDRGSKGLETPKIEGKFSLRA 232

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T  +  S+ F      L    G          L++A   ++   +  AE   +A R  
Sbjct: 233 SVTGMIMLSDVFVPEDHMLPGVKGLR---GPFSCLNNARYGIAWGALGAAEFCWHAARQY 289

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R + G  L    ++++ +AD+  +I      + RL    D  ++       A  M  
Sbjct: 290 TLDRKMFGRPLAATQLVQKKLADMQTEITLGLQGALRLGRLLDAGEA-------APEMIS 342

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  +  +   A +  GG+G ++E  + RH       +   G+ +   L +L   
Sbjct: 343 LMKRNNCGKSLDIARLARDMHGGNGIVDEYHVIRHMVNLETVNTYEGAHDVHAL-ILGRA 401

Query: 459 EKGTNLF 465
           + G + F
Sbjct: 402 QTGLSAF 408


>gi|103488356|ref|YP_617917.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978433|gb|ABF54584.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 400

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 124/362 (34%), Gaps = 33/362 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +  D  +        ++ + A  +  +           S      +
Sbjct: 58  REIMSEMGRLGLLGATIDPEYGGAGLNYVSYGLIAREVERIDSGYRSACSVQSSLVIHPI 117

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    +++ P + S E             +    GLTE   G+D A + ++ +KI 
Sbjct: 118 NAYGSEEQKRNFLPGLTSGE-------------LVGCFGLTEPDAGSDPAGMRTRAEKIE 164

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+ +   G   +   L +    GL   +++ K+  R
Sbjct: 165 GGYRLKGAKMWITNSPIADVFVVWAKSDAHGGA--IRGFLLEKGMKGLSAPKIEGKVSLR 222

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYAR- 340
           ++ T E+             +     V  +K     L+ A   +    +  AE  + A  
Sbjct: 223 ASVTGEIVMDGVEV----GEDALLPHVSGLKGPFGCLNRARYGIGWGAMGAAEFCYEAAR 278

Query: 341 ----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R   G  L    +++  +A++  +IA  T  + R+    DE          A  M
Sbjct: 279 NYTLERKQFGRPLAANQIVQLKLANMLTEIALGTQAALRVGRLIDEGH-------LAPDM 331

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K   C  A  +   A +  GG+G   +  + RH       +   G+ +   L +  
Sbjct: 332 ISFLKRNNCGKALDIARTARDMHGGNGISADYHVIRHAVNLETVNTYEGTHDVHALILGR 391

Query: 457 LL 458
            +
Sbjct: 392 AI 393


>gi|149186178|ref|ZP_01864492.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           SD-21]
 gi|148830209|gb|EDL48646.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           SD-21]
          Length = 391

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 124/361 (34%), Gaps = 33/361 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL  +     +        A+ + A  +  +           S      + 
Sbjct: 51  ELFPLMGEAGLLGATVPEEYGGAGATYVAYGLIAREIERVDSGYRSMASVQSSLVMYPIH 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P + S               +    GLTE   G+D A + +  +K+  
Sbjct: 111 AYGSEEQKQKYLPGLASG-------------QLIGCFGLTEPDAGSDPAGMKTTAKKVDG 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP +D F++ A+ E   G   +   + +    GL   +++ KI  R+
Sbjct: 158 GYVLNGSKTWISNSPFADVFVVWAKSEEHGG--GIRGFVLEKGMKGLSAPKIEGKISLRA 215

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T  +           D +     V+ +K     L+ A   +S   +  AE   +A R 
Sbjct: 216 STTGMIVMDEVEV----DEDALLPEVQGLKGPFGCLNRARYGISWGALGAAEFCMHAARQ 271

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L  + + +  +AD+  +I+     S R+    DE +       ++  M 
Sbjct: 272 YGLDRQQFGVPLASKQLYQLKLADMMTEISLGLQGSLRVGRLMDEGR-------FSPDMI 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K      A  +  +A +  GG+G  EE  + RH       +   G+ +   L +   
Sbjct: 325 SIVKRNNVGKALDIARKARDMHGGNGISEEYQVIRHMVNLETVNTYEGTHDVHALILGRA 384

Query: 458 L 458
           +
Sbjct: 385 I 385


>gi|302559586|ref|ZP_07311928.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302477204|gb|EFL40297.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 608

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/505 (17%), Positives = 172/505 (34%), Gaps = 79/505 (15%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              +  EL  L E        E    A+ N P    + P            ++    +  
Sbjct: 38  AKSILDELTRLAE----NELAESFTDADRNPPV---FDP---ETSTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                    +     A L L A        S    +  +         
Sbjct: 88  MDSEYWRLGLPEGIGGTTAPPSLIWAYAELILGANPAVWMYSSGPAFAGILHDE------ 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E          +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 142 ---------GNETQKQIARIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+ L D      G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKHLFDFETGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     ++S +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDRHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAISTLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLHTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D         +    E A   ++ PI K +  +     +A++++  GGSG+++E  I 
Sbjct: 373 VQDAIALKEAAGEDARTEHALNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R+S  +++  G+      D               F  + ++ G++   +   ++  +
Sbjct: 433 QYIRDSKIDTLYEGTTAIQGQDF-------------FFRKIVRNQGAALNSLAEDIKKFL 479

Query: 492 SLCK--EDKGLARFLTEKIALASSA 514
           +L +  ED G AR    K A+   A
Sbjct: 480 ALAEGGEDLGTARDHLAKAAVELEA 504


>gi|111219571|ref|YP_710365.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147103|emb|CAJ58748.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 667

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/527 (17%), Positives = 188/527 (35%), Gaps = 69/527 (13%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
           +    + A     V  ELE L     +    E    A+ + P L      G     V   
Sbjct: 79  APFEEMDAETAHEVLAELEHL----ATGPVAESFADADRHPPTLDP--ATG----TVTLP 128

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
            ++                       +         AA L L A       M+    +A 
Sbjct: 129 ESFKRSYLTVQDGEWWRLFVPTDLGGLGASPTVAWAAAELLLGANPAVFMYMAGPTFAAI 188

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           +  L                 E+  T      +      + LTE   G+D+ A  ++  +
Sbjct: 189 LHRL---------------GNEWQRTLAGYAIERHWGATMVLTEPDAGSDVGAGRTRAVE 233

Query: 221 ISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED----- 264
             DG + + G K F++S   D       ++LA+ EG       +  F+VP+ + D     
Sbjct: 234 QPDGTWHIEGVKRFITSGDWDVPENIIHLVLARPEGHGPGTKGLSMFVVPKFMPDPATGE 293

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
            G  NG+    ++ K+G + +AT EL F       G+L+GD++     +  +     +  
Sbjct: 294 PGERNGVYVTNIEKKMGLKVSATCELSFGERTPAVGWLVGDVHEGIAQMFQVIEYARMMV 353

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAA 368
              +++ +      A+ +AR R     +            +I+ P ++R +         
Sbjct: 354 GTKAIATLSSGYLNALDFARTRVQGADLTRSTDKTAPRVEIINHPDVRRMLMLQKAYAEG 413

Query: 369 ATALSFRLANSFD---EAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGG 421
             +L    A   D   +A +R      A      + PI K    + +  +++ +++  GG
Sbjct: 414 MRSLVLYTATFQDRVAQAAARGGNDELAVRINDLLLPIVKGVGSERSYELLSTSLQIFGG 473

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDL-GS 478
           SGY+++  I ++ R++  +++  G+ +     L    ++         +   ++  +   
Sbjct: 474 SGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDRGQALTAVLGEIQTFVKAE 533

Query: 479 SGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSAAALYRAGMN 523
           +G   +   R+ +    +D + +   +   + A A  A  +Y+ G+N
Sbjct: 534 AGNGALQYEREVLGAALDDVQAMVGSMVGYLTAAADDARQVYKVGLN 580


>gi|293410009|ref|ZP_06653585.1| acyl-CoA dehydrogenase [Escherichia coli B354]
 gi|301026926|ref|ZP_07190322.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           69-1]
 gi|331683202|ref|ZP_08383803.1| putative acyl-CoA dehydrogenase [Escherichia coli H299]
 gi|291470477|gb|EFF12961.1| acyl-CoA dehydrogenase [Escherichia coli B354]
 gi|300395273|gb|EFJ78811.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           69-1]
 gi|323978168|gb|EGB73254.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
 gi|331079417|gb|EGI50614.1| putative acyl-CoA dehydrogenase [Escherichia coli H299]
          Length = 383

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|282863870|ref|ZP_06272928.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282561571|gb|EFB67115.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 608

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 86/506 (16%), Positives = 180/506 (35%), Gaps = 80/506 (15%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              +  E+  L E        +    A+ N P    + P     +      ++    +  
Sbjct: 38  AKSILDEVTRLAE----NELADSYADADRNPPV---FDP---ETNTAPVPASFKKSYQAF 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A L L+    A  + S     A ++        
Sbjct: 88  MDSEYWRLGLPEEIGGTTSPRSLIWGYAEL-LLGSNPAVWMYSSGPAFAGILFDEGNEAQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K                    +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 147 KK--------------VAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  FLVP+   D      G  NG+   
Sbjct: 193 VKRFITSGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWTTGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G +++ T E+ F +     G+L+GD +     +  +     +     +++ +  
Sbjct: 253 NVEHKMGLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIATLST 312

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++RA+           +L    A+
Sbjct: 313 GYLNALEYAKERVQGTDLSQFMDKTAPKVTITHHPDVRRALMTQKAYAEGMRSLVMYTAS 372

Query: 379 SFD--EAKSRSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             D  + K  + E + A       + PI K +  + +   +A++++  GGSGY++E  I 
Sbjct: 373 VQDAIQVKEAAGEDSKALHGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R++  +++  G+      D               F  + +D G+S   +   ++  +
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDF-------------FFRKIVRDQGASLNTLSEEIKKFL 479

Query: 492 SLCKEDKGLARFLTEKIALASSAAAL 517
           +  + ++ LA  L    +LA +A  L
Sbjct: 480 AEAQGNEELAGALD---SLAKAAVDL 502


>gi|302561455|ref|ZP_07313797.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479073|gb|EFL42166.1| glutaryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 394

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 131/408 (32%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  T +  A  A+   P +  +   GE        P    L R     G+       
Sbjct: 24  ELAVRDTVRTWA--ADRVLPYVADWYEKGEL-------PGIRELAREL--GGIGALGMSL 72

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                    A +   A L L A        +      +   V    +    + W P++ S
Sbjct: 73  DGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGSEEQKRHWLPRMAS 132

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V    GLTE   G+D  ++ +  ++            W  +  ++
Sbjct: 133 GE-------------VIGCFGLTEPDHGSDPGSMRTHAKRDGGDWVLNGRKMWITNGSVA 179

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              ++ A+ +  +  F+VP         G     +K+K   R++ T EL   +       
Sbjct: 180 GVAVVWARTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDDVRLPADA 234

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L   TG    +  L          ++   R     A+ YA+ R   G  +    + +  
Sbjct: 235 VLPEVTGLKGPLGCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAK 294

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A   
Sbjct: 295 LADMAVELHKGLLLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIEICRTARTV 347

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 348 LGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 394


>gi|297616671|ref|YP_003701830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144508|gb|ADI01265.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 606

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/530 (18%), Positives = 196/530 (36%), Gaps = 85/530 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V    ++  L +    +G   S  D+                 L + A       +  +
Sbjct: 73  EVFVPESFKGLFKYVQENGWGTSNLDQ-HGEGALPLTLLNVVNELLIAANPSLMSYVVLT 131

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A ++      R+   + PK+F   +  T             + LTE   G+D+  I 
Sbjct: 132 TGAAGLIESFGDERLKNMFLPKMFDGSWSGT-------------MCLTEPSAGSDVGDIL 178

Query: 216 SQGQKISD-GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           S+     +  IY + G+K F++    +       + LA+++G       +  F+VP+   
Sbjct: 179 SKAYPTDNPRIYKIRGNKIFITGGDGNHVENVVHLFLARIDGAASGTKGLSLFVVPKYWV 238

Query: 264 DGS----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLG------DLNVSTGPVE 310
           +      PN +    +++K+G   ++TV L F       G+LLG              + 
Sbjct: 239 NEDGSLEPNDVKAVGVEHKMGLEGSSTVALAFGENDGCRGWLLGSYNAETGEGQGIAQMF 298

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPVMKRAIADIA 363
            M     L + I +++    +   A  Y + R   G         +I+   ++R +    
Sbjct: 299 QMMNEERLTTGIFALALAANAYWNAAEYCKERIQ-GRNQQGERTAIINHEDVRRMLLLNK 357

Query: 364 LDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
               A  A+  + +   D AK       R   AA    + P+ K +    A  +IAE+++
Sbjct: 358 ATSEACRAIIMKTSYYMDVAKHDMDNGRRKAAAAMVDCLIPLAKAYPSDEAWTLIAESIQ 417

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLEQ 474
             GG GY EE  +A+  R+    SI  G+     +D++     L KG ++F     ++E 
Sbjct: 418 AHGGYGYCEEYPVAQAARDCKVLSIWEGTNFIQGMDLVGRKWNLGKG-SVFNAFLKSIED 476

Query: 475 DLGSS-----GKKVITILRDSISLCKED------------KGLARFLTEKIALASSAAAL 517
            + ++      KK +  L  ++   K+              G+      +I   ++ A L
Sbjct: 477 FIEANKTEETLKKELANLARALDSYKDLMNVMRGYLSTGKPGMMPTFARRI--LTATAQL 534

Query: 518 YRAGMNDIADVFLENRFLDNCHSTH--------CMLHGRFNAAHIIDSLY 559
           Y  GM  +    +  R +    + H         +L  R+   +++ +++
Sbjct: 535 YG-GMCLLEQALIAQRRIGEIGTDHYDYQFYNAKILSARYYLRNVVPNVW 583


>gi|118590352|ref|ZP_01547754.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118436815|gb|EAV43454.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 407

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 127/361 (35%), Gaps = 34/361 (9%)

Query: 112 HDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +        A+ + A  +  +       +   S      +    +   
Sbjct: 73  ELGLLGVTLPEDYGCAGASYVAYGVVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQ 132

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K + PK+ + E+                 GLTE   G+D A + ++ +KI  G      
Sbjct: 133 RKKYLPKLATGEF-------------VGCFGLTEPDAGSDPAGMRTRAEKIDGGYKLTGS 179

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+ 
Sbjct: 180 KMWISNSPIADVFVVWAKSEAHDGA--IRGFVLEKGMKGLTAPKVGGKLSLRASITGEIV 237

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
                       +     V  +K     L+ A   ++   +  AE     A  Y   R  
Sbjct: 238 MDGVEV----GEDALLPNVSGLKGPFGCLNRARYGIAWGAMGAAEDCWTRARQYGLDREQ 293

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    + ++ +AD+  +I      + R+   FD  K        A  M  + K   
Sbjct: 294 FGRPLAQTQLFQKKLADMQTEITLGLQAALRVGQLFDAGKV-------APEMISLIKRNN 346

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +  ++ +  GG+G  EE  I RH +     +   G+ +   L +L   + G   
Sbjct: 347 CGKALDIARQSRDMHGGNGIQEEYHIMRHAQNLETVNTYEGTHDIHAL-ILGRAQTGLQA 405

Query: 465 F 465
           F
Sbjct: 406 F 406


>gi|145221034|ref|YP_001131712.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145213520|gb|ABP42924.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 611

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/530 (18%), Positives = 188/530 (35%), Gaps = 91/530 (17%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--------MANYNTPQLH 85
            N +     ++AL     +    +L+L     +   A ELA           +   P   
Sbjct: 13  FNLFE----VLALEKALATGDFGDLDLQSARDMLAQAVELAEGPVAEAFSETDRRPP--- 65

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           ++ P       V     +    R                  V      +     L L AQ
Sbjct: 66  SFDPATHV---VSIPEPFKKSFRAWYDGEWFRVGMAEEIGGVPAPSMLEWAINELALGAQ 122

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A    +    +  + A+       + WA  +  R +  T             + LTE 
Sbjct: 123 PAAFMYAAGPKMAHILHAIGN--EQQRHWAGLMIERAWGAT-------------MVLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEG------RV 253
             G+D+ A  ++  +  DG + L G K F+++  +D        ++LA+ EG       +
Sbjct: 168 DAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDADDLFENIVHVVLARPEGAGPGTKGL 227

Query: 254 GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLN 303
             F+VP+   D      G  NG+    L++K+G +++AT EL F        G+L+ D +
Sbjct: 228 SLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLVNDTH 287

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  +     +     +++ +      A+ YA+ R                  ++ 
Sbjct: 288 SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTRIQGADMIQMTDKTAPRVTIMH 347

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARI----MAPITKYWC 404
            P ++RA+           AL    A   D   +      +AA A      + PI K   
Sbjct: 348 HPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLLPIVKGVG 407

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            + A   + E+++  GGSG++++  + ++ R++  +S+  G+      D           
Sbjct: 408 SERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGTTAIQAQDF---------- 457

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
               F  + +D G +   V++ +R  +        LA   TE+ AL ++A
Sbjct: 458 ---FFRKIARDQGGALLHVVSHMRRFLDDAAARPELA---TER-ALLATA 500


>gi|222053348|ref|YP_002535710.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221562637|gb|ACM18609.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 385

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 117/358 (32%), Gaps = 25/358 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVA 163
            L+++    G         +          +  A  L  ++      L   ++  +  V 
Sbjct: 40  ELVKKMADLGFFGCALPEEYGGNGCGFLESVIIAEQLATISGSSRLPLNMQNIGPSITVN 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK  S EY                  +TE   G+D+ ++ +      D
Sbjct: 100 QFGTKEQKERFIPKWVSGEYFG-------------FFAITEPNSGSDVISMGTTAIDRGD 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNR 282
                    W  ++ + D  ++ A  +       +   + +     G+    ++ K+G  
Sbjct: 147 HWELNGQKMWISNAHLGDYGLVYAMTDKSAKYKGMTCFIVNLKGNEGIITAPIETKLGLH 206

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYA 339
              T E+ FS         L  V  G    M       +  A  ++     ++  AI YA
Sbjct: 207 CAPTGEISFSQAKIPKDSVLGEVGQGFQICMYQLNNTRISCAAGALGIGGGAIEAAIGYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    +++ +IA++  +  AA  L ++ A   D+           +    +
Sbjct: 267 NERTQFGKKIGSYQMIQASIAEMVAEHEAAKLLVYQAAWLKDQGLPN-------QYQTSM 319

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            K +  + A     E M+  G  G+  E    R  R+S +   + G+ N     +  +
Sbjct: 320 AKLFASEAAVHAATETMKIFGSYGFSTEYPAERWLRDSMSLRTVEGTSNIQKTIIAGM 377


>gi|149371980|ref|ZP_01891299.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
 gi|149355120|gb|EDM43681.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49]
          Length = 392

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 86/436 (19%), Positives = 148/436 (33%), Gaps = 70/436 (16%)

Query: 28  PPLFIGMNAYSSDSLLVA---LIANFPSVVHKELELLGEYVLSCTAQELARMANYNT--- 81
           P LF   + Y+ D LL     LI +      K         +S   +E A+ A +     
Sbjct: 3   PDLFEAPDYYNIDDLLTEEHKLIRDAARAWVK-------RDVSPIIEEAAQAAKFPKSII 55

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P L   G  G       + P            GL    +    + + R  +     A   
Sbjct: 56  PGLADIGAFG------PYIPT------EYGGAGLDQISYGLIMQEIERGDSGVRSTA--- 100

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               +++  +M P       +           + PK+ S E+                 G
Sbjct: 101 ---SVQSSLVMYP-------IWKYGNEEQRNKYLPKLASGEW-------------IGSFG 137

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G++   + +  + + D         W  +SP  D  ++ A+ E      LV   
Sbjct: 138 LTEPDHGSNPGGMVTNFKDMGDHYLLNGAKMWISNSPFCDIAVVWAKNEEGRIHGLV--- 194

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
             +    G       NK   R++AT EL F +         N+          L  LDSA
Sbjct: 195 -VERGMEGFSTPETHNKWSLRASATGELIFQDVKVP---KENLLPNKSGLGAPLGCLDSA 250

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L  RL
Sbjct: 251 RYGIAWGVIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLLCLRL 310

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               +E K+ S + + A+            MA  +  +A + +GG G   E SI RH   
Sbjct: 311 GQLKNEDKATSAQISMAKR-------NNVDMALKIARDARQILGGMGISGEYSIMRHMMN 363

Query: 437 SPANSILLGSGNAMVL 452
             +     G+ +  +L
Sbjct: 364 LESVVTYEGTHDIHLL 379


>gi|86748287|ref|YP_484783.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86571315|gb|ABD05872.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 404

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 122/354 (34%), Gaps = 37/354 (10%)

Query: 114 GLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +        A+ + A  +  +           S      +         K
Sbjct: 72  GLIGITLPEDYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAYGDETQRK 131

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                 GLTE   G+D   + ++ +K++DG        
Sbjct: 132 KYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTRAEKVADGYRLTGTKM 178

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++P++D F++ A+         +   + +    GL   ++  K+  R++ T E+   
Sbjct: 179 WISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEIVMD 236

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
                   LL +++   GP         L+ A   +S   +  AE     A  Y   R  
Sbjct: 237 GVVVPEEALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCFQRARQYTLDRKQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L    ++++ +AD+  +I      S R+    DE +        A  M  I K   
Sbjct: 291 FNRPLAATQLVQKKLADMETEITLGLQASLRVGRLMDEGRV-------APEMISIVKRNN 343

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +   +
Sbjct: 344 CGKALDIARVARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALIIGRAI 397


>gi|256396118|ref|YP_003117682.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362344|gb|ACU75841.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 382

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 130/379 (34%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P    LL R   +GL        F                        
Sbjct: 29  PCANEWDRDGRIPE--ELLERLAAEGLWAPFLPPEFGGAGLDMVTLGAIHEEVGRGCSSV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L++    ++  V    +P   + W P              M + +V     L+E   G
Sbjct: 87  RSLLTVHTMASWAVHRWGSPEQRERWLP-------------AMSRGAVLGAFCLSEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D A I +     + G       +W  +   +D  ++ A+V   +  FLVP         
Sbjct: 134 SDTAGIATTAVPHAGGWRLNGMKRWITNGQRADLLLVFARVGTGIAAFLVP-----HDTP 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+    +   +G R++   E+ F +        L   +G    M +   LD    SV+  
Sbjct: 189 GVSMLPIDGMLGTRASMLAEISFQDVDLGPDALLG-PSGFTAGMVLTGTLDLGRYSVATG 247

Query: 329 RVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V + +A       Y+  R V G  L + P ++  ++D+  D  AA  L        D  
Sbjct: 248 SVGIIQACVDACAGYSAARKVGGAPLSELPQIRAKLSDMVTDARAARLLCEEAGRLKDAG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +  A +      I KY+    A    AEA++  G +G   +  + R YR++    I+
Sbjct: 308 EPSTIMATW------IAKYFASTAAARHAAEAVQVHGANGCSPDYPVERFYRDAKIMEII 361

Query: 444 LGSGNAMVLDVLNLLEKGT 462
            GS     L +     +G 
Sbjct: 362 EGSTEVQQLTIAGEAFRGG 380


>gi|254480511|ref|ZP_05093758.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039094|gb|EEB79754.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 390

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/375 (21%), Positives = 135/375 (36%), Gaps = 29/375 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+  F P    L  ++   GL    +   +               +     L  
Sbjct: 36  PHVDEWDEQGFLPE--ELWGKAAEFGLLGLGYPEQYGG-------------IETGIDLYH 80

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEK 205
            +++S  ++  S+  L +T   H    P +    S         P+      I L +TE 
Sbjct: 81  HNILSEELSRTSLGGLPSTLLSHGIGMPPVVAFGSESLKSEIIPPVLAGEKRICLAITEP 140

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GG+D+A + +   +  +  Y ++G K F+S  M   +       G  G   V  L+   
Sbjct: 141 SGGSDVANLQTTAVRDGEH-YIVNGSKTFISGGMGSHWATTGVRTGGEGGSGVSVLVIPM 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G+    L  K G   + T  L F N     G LL +       + +      L  A+
Sbjct: 200 DLEGVSRTPLNKKQGWWCSDTATLYFDNVRVPAGNLLAEEGNGFLVIANNFNDERLAMAV 259

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M  +  RV L +A+++A+ R   G  L D  V++  IA++   I                
Sbjct: 260 MMEAFARVCLEDAVNWAQERKTFGKRLADHQVIRHKIAEMKQRINVCQTYIQHCTRQVIT 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +   + A  ++    T  +C         EAM+ +GG GY+    + R YRE   N+I
Sbjct: 320 GTADFGDIALLKVQCSQTMEFC-------AREAMQILGGIGYMRGNRVERIYREVRVNAI 372

Query: 443 LLGSGNAMVLDVLNL 457
             GS   M       
Sbjct: 373 GGGSEEIMRDLASRA 387


>gi|84516103|ref|ZP_01003463.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509799|gb|EAQ06256.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 402

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 128/368 (34%), Gaps = 33/368 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            + R     GL        +  +          AR           +MS  S      + 
Sbjct: 61  DIFREMGAMGLLGVTIPEEYGGLGGSYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 120

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                 GLTE   G+D +A+ +  +K + 
Sbjct: 121 AYGSEEQRQKYLPKLASGEW-------------IGCFGLTEPDAGSDPSAMKTTAKKTAT 167

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E   G   +   + +    GL   ++  K+  R+
Sbjct: 168 GYMISGAKMWISNSPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPKVGGKLSLRA 225

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+             +     VE +K     L+ A   +S   +  AE   +A R 
Sbjct: 226 SITGEIVMDGVEV----GEDALLPNVEGLKGPFGCLNRARYGISWGVLGAAEFCMHAARQ 281

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    + +  +A++  +I+     S R+    DEA++       A  M 
Sbjct: 282 YGLDRKQFGKPLAQTQLQQVKLANMLTEISLGLQASLRVGRLLDEAQA-------APEMI 334

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   + +  GG+G  EE  I RH       +   G+ +   L +   
Sbjct: 335 SIIKRNNCGKALDIARMSRDMHGGNGISEEYQIMRHMVNLETVNTYEGTHDVHALIIGRA 394

Query: 458 LEKGTNLF 465
           +      F
Sbjct: 395 ITGLQAFF 402


>gi|138520003|gb|AAI35459.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 440

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 115/311 (36%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +A+  +    + + P++ S E+                 GLTE   G+D A +
Sbjct: 147 SSLVMHPIAVYGSEEQKQKYLPRLASGEW-------------LGCFGLTEPNHGSDPAGM 193

Query: 215 TSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    S          W  +SP++D  ++ A  E       V   L +    GL  
Sbjct: 194 ETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGK----VRGFLIERGTKGLST 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++AT  +   +     + + N+             L++A   +S   +  
Sbjct: 250 PKIEGKFSLRASATGMILLEDV---EIPEENLLPNVSGLGGPFGCLNNARYGISWGALGA 306

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R   G  L    ++++ +AD+  DI        RL    DE K+  
Sbjct: 307 AEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLTDITIGLQACLRLGRLKDEEKATP 366

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  I RH     + +   G+ 
Sbjct: 367 E-------MISMLKRNSCGKALDIARQARDMLGGNGISDEYHIIRHVMNLESVNTYEGTH 419

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 420 DVHALILGRAI 430


>gi|68535259|ref|YP_249964.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68262858|emb|CAI36346.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 388

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 129/361 (35%), Gaps = 39/361 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+H   ++    P     A+ +    +  +       +      +   +    +    
Sbjct: 61  ALGMHLEGYE---CPGASAVAYGLACMEIEAVDSGLRSFVSVQGSLAMFAIHHWGSEEQK 117

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ + EY                 GLTE   G+D A++ ++  +  D        
Sbjct: 118 EKYLPKMAAGEY-------------LGCFGLTEPDAGSDPASMKTRATRDGDEWVLNGTK 164

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D  ++ A+ E     F++ + +E     G     +  K+  R++ T E+  
Sbjct: 165 MWITNSPVADVAVVWARTEDGFAGFILEKGME-----GFTTPEIHKKLSLRASITGEIVL 219

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVS 345
            N        L      ++ ++  L  L+ A   +        R SL  AI YA+ R V 
Sbjct: 220 DNCRVPDSQRLPK----IDTLRGPLTCLNEARYGIIWGALGAARDSLETAIEYAQTREVF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    + +  +A++++++  +  L+ +L    D+ +        A     + K    
Sbjct: 276 GKSLSSYQLTQAKLANMSVELNKSVLLALQLGRLKDKGE-------LAPHQVSVGKLNST 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +A  +  E    +G SG   E S  RH     +     G+   M   ++     G   F
Sbjct: 329 GVALEIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTAE-MHQLIIGQALTGKGAF 387

Query: 466 E 466
            
Sbjct: 388 R 388


>gi|319951408|ref|ZP_08025227.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319434927|gb|EFV90228.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 612

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 92/506 (18%), Positives = 180/506 (35%), Gaps = 85/506 (16%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+ +        A+  A  A+ N P    + P       V     +    +     G   
Sbjct: 42  LDEVSALAEGPVAESFAS-ADRNPPV---FDPETH---SVSIPEDFKKSFKAWFDAGYWS 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +   +A       + L A   A    +    +A ++    T    K WA  
Sbjct: 95  MGLPEEIGGMPAPRAMVWAVGEMMLGANAPAFMYSAGPSFAA-VLYENGTEEQKK-WAAT 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S
Sbjct: 153 CAERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITS 199

Query: 238 PMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
             SD        ++LA+ EG       +  F VP+   D      G  NG+    +++K+
Sbjct: 200 ADSDDMFENIFHLVLARPEGAGPGTKGLSLFFVPKFHFDFENDELGERNGVFVTGVEHKM 259

Query: 280 GNRSNATVELEFSN----TFGFLLGD--LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           G +++ T E+ F        G+++G   LN     + D+     +     ++S +     
Sbjct: 260 GIKASTTCEVTFGGHGVPAKGWMVGGDELNQGIRQMFDVIEHARMMVGTKAISTLSTGYL 319

Query: 334 EAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            A+ +A+ R   G              +   P ++RA+           A+    A   D
Sbjct: 320 NALEFAKERVQGGDMTEMADKTAPRVTITHHPDVRRALIRQKAFAEGLRAVYMYTAAHQD 379

Query: 382 ---EAKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                ++   +A  A      + PI K    + A  ++ E+++  GGSG++++  I ++ 
Sbjct: 380 PETAVRASGADAELAHRVNDLLLPIVKGVGSERAYELLTESLQTFGGSGFLQDYPIEQYI 439

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-- 492
           R++  +S+  G+      D               F  + +D G++   +   ++  +   
Sbjct: 440 RDAKIDSLYEGTTAIQAQDF-------------FFRKIARDRGTAVGHISAQIKHFLEND 486

Query: 493 -----LCKEDKGLARFLTEKIALASS 513
                L  E + LA  L +  A+  +
Sbjct: 487 ACGGKLAAERELLATALADVEAMIGT 512


>gi|16764707|ref|NP_460322.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|62179945|ref|YP_216362.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|167551681|ref|ZP_02345435.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167994375|ref|ZP_02575467.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168233544|ref|ZP_02658602.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168239525|ref|ZP_02664583.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240863|ref|ZP_02665795.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168263819|ref|ZP_02685792.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168463239|ref|ZP_02697170.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168822219|ref|ZP_02834219.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194445957|ref|YP_002040613.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194451275|ref|YP_002045363.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470559|ref|ZP_03076543.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194738369|ref|YP_002114373.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250875|ref|YP_002146681.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197265471|ref|ZP_03165545.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|200390997|ref|ZP_03217608.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|207857137|ref|YP_002243788.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238910827|ref|ZP_04654664.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16419876|gb|AAL20281.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62127578|gb|AAX65281.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194404620|gb|ACF64842.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194409579|gb|ACF69798.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456923|gb|EDX45762.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194713871|gb|ACF93092.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633847|gb|EDX52199.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197214578|gb|ACH51975.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197243726|gb|EDY26346.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197287761|gb|EDY27151.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199603442|gb|EDZ01988.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205323659|gb|EDZ11498.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205327748|gb|EDZ14512.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205332329|gb|EDZ19093.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205339459|gb|EDZ26223.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205341315|gb|EDZ28079.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205347553|gb|EDZ34184.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206708940|emb|CAR33270.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261246565|emb|CBG24375.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993241|gb|ACY88126.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157893|emb|CBW17387.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912342|dbj|BAJ36316.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086163|emb|CBY95937.1| putative oxidoreductase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321223985|gb|EFX49048.1| Acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322714412|gb|EFZ05983.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129628|gb|ADX17058.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988244|gb|AEF07227.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 383

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 138/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--KEFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEISKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D +  G+  
Sbjct: 137 TTTWTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|330797908|ref|XP_003286999.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum]
 gi|325083022|gb|EGC36486.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum]
          Length = 416

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 136/367 (37%), Gaps = 47/367 (12%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             ++R     G+  +       P     +H         + ++++G+  + SV S     
Sbjct: 79  REIMREYGKMGMLGAT-----IPAYGGVSHVAYGLMANAVEKVDSGYRSAMSVQSSLVMH 133

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + +   + S               +    GLTE   G+D A + ++ +K
Sbjct: 134 PIYTFGTEAQKQKYLDGLASG-------------DLVGCFGLTEPNAGSDPAGMQTRAKK 180

Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            + G Y L+G K W  +SP++D F++ A+ +       +   + +    GL   +++ K+
Sbjct: 181 NTAGNYVLNGTKTWITNSPIADVFVIWAKDDNND----IRGFVLEKGMKGLSAPKIEGKL 236

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
             R++ T  +   +       +  D+    GP         L+ A   +    +  AE  
Sbjct: 237 SLRASITGMIVMEDVEVPASHMFPDIKGLRGP------FSCLNKARYGIGWGSLGAAEFC 290

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  Y   R   G  L    + ++ +AD+A +I+      +++    D  K+  E   
Sbjct: 291 YTTARQYGLDRKQFGRPLAANQLYQKKLADMATEISLGLQACYQVGRLIDAGKATPER-- 348

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K   C  +  +  ++ + +GG+G  +E  + RH       +   G+ +   
Sbjct: 349 -----ISLIKRNSCGKSLDIARQSRDMLGGNGIADEYHVIRHAANLETVNTYEGTHDIHA 403

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 404 LILGRAI 410


>gi|253797168|ref|YP_003030169.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435]
 gi|289552497|ref|ZP_06441707.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605]
 gi|297632725|ref|ZP_06950505.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207]
 gi|297729699|ref|ZP_06958817.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN R506]
 gi|313657025|ref|ZP_07813905.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN V2475]
 gi|253318671|gb|ACT23274.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435]
 gi|289437129|gb|EFD19622.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605]
 gi|328456955|gb|AEB02378.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207]
          Length = 611

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/520 (17%), Positives = 193/520 (37%), Gaps = 68/520 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
                 L  +        A+      + N P    + P       V    ++   +   +
Sbjct: 36  DTARDMLAEVSRLAEGPVAESFVE-GDRNPPV---FDPKTH---SVMLPESFKKSVNAML 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D +   +   +A  + A   +++    A  + +     A ++  + T    
Sbjct: 89  EAGWDKVGIDEALGGMPMPKA-VVWALHEHILGANPAVWMYAGGAGFAQILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 148 K-WAVLAAERGWGST-------------MVLTEPDAGSDVGAARTKAVQQADGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  + VP+ L      E G  NG+   
Sbjct: 194 KRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFDVETGEPGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALQYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKS---RSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A +      +A  A      M P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 374 TFQDAAVAEVVHGVDAKLAVKVNDLMLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ--DLGSSGKKVITI 486
            ++ R++  +S+  G+      D     ++         +   +++  D G+   ++ T 
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQEFVDSGAGNGRLKTE 493

Query: 487 LRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
                    + +G+A  LT  +  A     +LY+ G+  +
Sbjct: 494 RALLAKALTDVQGMAAALTGYLMAAQQDVTSLYKVGLGSV 533


>gi|218673248|ref|ZP_03522917.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli GR56]
          Length = 386

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 101/290 (34%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CEGDQRERYLLPAVRGEKIDALAITEPDAGSDMRGMKCAARRDG-GDFVLNGTKHFISHA 159

Query: 239 M-SDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+ A          +       L D    G    +  + + +R      L F++
Sbjct: 160 DVADFVIVFAATGEEETPKGIKKKITAFLVDRGTPGFEILKGYDSVSHRGYHNSTLSFTD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++              L  A   V   R     A+ YA  R   G  + 
Sbjct: 220 CRIPEAQVLGEVHRGFDIANQWLYGTRLTVAATCVGRARRVFEMALPYAAERRQFGRPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D   +       A       K +  +M   
Sbjct: 280 ANQGVSFKLADMITEIDAAEWLTLSAAWRLDAGLA-------ADRQIASAKLYASEMLAH 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V  EA++  GG G +++  +AR +R++    I  G+       +   L +
Sbjct: 333 VTDEAIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLR 382


>gi|126641862|ref|YP_001084846.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 516

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 92/497 (18%), Positives = 174/497 (35%), Gaps = 87/497 (17%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
            + +   +  +      +       L A          ++ +A+++     P   K +  
Sbjct: 2   SAAFPSDWNGMNLPNTIERAGMAYLLGANSGTAGYAFLTIGNANLLMAHGEPEKVKPYVN 61

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            +   +   T             + L+E + G+ +A I ++  K  DG Y L G+K ++S
Sbjct: 62  AMIEGKCFGT-------------MCLSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWIS 108

Query: 237 SPMSD-----AFIMLAQVEGR----------VGCFLVPRLLEDGS-----PNGLCYQRLK 276
               D       ++LA++             +  F VPR L D +      N +    + 
Sbjct: 109 GGEHDISDNIVHLVLAKIPDENGQLPAGVQGISLFTVPRKLLDENGQPSERNDVVLAGIN 168

Query: 277 NKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +K+G R      L F              G L+G+       +  M     +   + + +
Sbjct: 169 HKMGYRGTVNCVLNFGEGRFTPEGEAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAA 228

Query: 327 GMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF 374
                   A+ YA+ R   G              LI    ++R +      ++ A AL  
Sbjct: 229 LGYTGYLHALDYAKTRVQ-GRSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCL 287

Query: 375 RLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   D+      A+ R +      ++ P+ K W  +        A++  GG GY  E 
Sbjct: 288 YAARLTDDIHSLEDAEQRDQAHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREY 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN---LFEQLFSTLEQDLGSSGKK 482
           ++ + YR++  N I  G+     LD+L     L +G +   L E++ +T+E        K
Sbjct: 348 NVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRLNQGLSMKLLHEKIMNTIE------LAK 401

Query: 483 VITILRDSISLCKEDKGLARFLTEK--------IALASSAAALYRAGMNDIADVFLENRF 534
               L+D      +   L R +TEK        + LA++A  L   G   +  ++L    
Sbjct: 402 AEPSLKDHADQLDQKWQLIRNVTEKLHALTDVELQLANAANYLEAFGHLVVGWLWL---- 457

Query: 535 LDNCHSTHCMLHGRFNA 551
            D     H ++    + 
Sbjct: 458 -DQAVVIHKLMPNSTDP 473


>gi|171320865|ref|ZP_02909865.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171093870|gb|EDT39001.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 385

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 16/281 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +        LTE   G+D   I ++  +  D  Y ++G K F+S  
Sbjct: 101 CKGDQIERYLNPAVRGERVDCFALTEPGAGSDAMGIRTRAVRDGDD-YVINGSKHFISHA 159

Query: 239 MSDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            +  F++L  V G           V   L D    G+  +R  +    R     E+  ++
Sbjct: 160 DTADFVILFAVTGEEEVRGQKRKRVTCFLIDKDTPGMTVRRGPHCTSLRGYHQSEIFLTD 219

Query: 294 TFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+ +       D      +  A  ++   + +   A  +A  R   G  + 
Sbjct: 220 CRVSTAQILGEEHRGFDLANDWLTAGRVMVAANNIGRAQRAFEMAAEWAATRQQFGKRIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +       +AD+  +I AA  ++   A   D       +AA A+++A        +    
Sbjct: 280 EFQGTSFKLADMQTEIRAAELVTLYTAQKLDLGTMTDGDAALAKLLA-------TETLGR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           V   A++  GG G ++E  I R +R++    I  G+     
Sbjct: 333 VTDHAVQIYGGMGLMDELPIERFWRDARIERIWEGTSEIQR 373


>gi|108805083|ref|YP_645020.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766326|gb|ABG05208.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 390

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 138/406 (33%), Gaps = 47/406 (11%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G   L+      AR      P+ H          +         L+      G       
Sbjct: 15  GHRELARKLDAWARENIRPLPEAH----------EDTVDDLCRKLVALLGEAGWLEYAAS 64

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
              +    +    +R    Y  A  +    M    + A  ++L  +  + + + P +   
Sbjct: 65  EKLD---VRSLCLLRETLGYHHALADFAFAMQGLGSGA--ISLFGSKELKERYLPGV--- 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                     ++        L+E   G+D+AA+++   +  D         W  +  ++D
Sbjct: 117 ----------REGKKIAAFALSEPEAGSDVAAVSTTATEDEDHYVIDGTKTWISNGGLAD 166

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            + + A+     G   +   + D    G         +        +L+F N        
Sbjct: 167 FYTVFARTGEAPGAKGLSAFVVDAGTPGFEVAERIPVMAPH--PLAKLKFENVRVPKDRM 224

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           +     P +  +I +             ++   R +L EA+  A  R + G  + +  ++
Sbjct: 225 IG---EPGQGFRIAMATLDVFRSTVGAAALGFARRALDEALKRATNRELFGAPMSELQLV 281

Query: 356 KRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +  +AD+AL + A+  L +R A + D  A   + EAA A++ A        + A  VI E
Sbjct: 282 QGKLADMALGVDASALLVYRAAWTKDRIADRVTREAAMAKLHA-------TETAQRVIDE 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++  GG G      + R YRE  A  I  G+     + +   + K
Sbjct: 335 AVQIFGGLGVTSGHPVERLYREIRALRIYEGASEVQKVIIARQVIK 380


>gi|205352923|ref|YP_002226724.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205272704|emb|CAR37618.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326627996|gb|EGE34339.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 383

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 138/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--KEFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEISKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D +  G+  
Sbjct: 137 TTTWTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADRKESLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|299134720|ref|ZP_07027912.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590530|gb|EFI50733.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 401

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 127/361 (35%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             + R     GL        +        A+ + A  +  +           S      +
Sbjct: 59  RDIFREMGELGLIGITLPEEYGCANASYVAYGLVAREVERVDSGYRSMNSVQSSLVMYPI 118

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + PK+ S E+                 GLTE   G+D+ ++ ++ +K+S
Sbjct: 119 YAYGDEAQRKKYLPKLASGEW-------------VGCFGLTEPDAGSDVDSMKTRAEKVS 165

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+ +       +   + +    GL   ++  K+  R
Sbjct: 166 DGYRLTGSKMWISNAPIADVFVIWAKSQAHDNK--IRGFILEKGMKGLSAPKIAGKLSLR 223

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T E+            L   +G          L+ A   +S   +  AE     A  
Sbjct: 224 ASITGEVVMDGVVVPESALLPNCSGLSGPFG---CLNRARYGISWGVMGAAEDCFQRARQ 280

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    +M++ +AD+  +IA     S R+    DE K       +A  M 
Sbjct: 281 YVLDRKQFGRPLAATQLMQKKLADMETEIALGLQGSLRVGRLMDEGK-------FAPEMI 333

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A +  GG+G   E  + RH +   + +   G+ +   L +   
Sbjct: 334 SLMKRNNCGKALDIARVARDMHGGNGISSEFHVMRHAQNLESVNTYEGTHDVHALILGRA 393

Query: 458 L 458
           +
Sbjct: 394 I 394


>gi|240168468|ref|ZP_04747127.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium kansasii ATCC 12478]
          Length = 611

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/498 (18%), Positives = 183/498 (36%), Gaps = 79/498 (15%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             + N P+   + P       V    A+   +R  +  G   +  + +   +   +A   
Sbjct: 59  EGDRNPPE---FDPKTH---SVTLPEAFKDSVRAVMDGGWDKAGIEEALGGMPMPKALVW 112

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                +L A        S    S  +  L  T    K WA     R +  T         
Sbjct: 113 ALHEHFLGANPAVWMYASGGGFSNILYHL-GTEEQKK-WAVLAAERGWGST--------- 161

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQV 249
               + LTE   G+D+ A  ++  +  DG + + G K F++S  S         ++LA+ 
Sbjct: 162 ----MVLTEPDAGSDVGAGRTKAVQQEDGSWHIDGVKRFITSGDSGDLFENIFHLVLARP 217

Query: 250 EG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---- 293
           EG       +  F VP+ L D      G  NG+    +++K+G + +AT EL        
Sbjct: 218 EGAGPGTKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVP 277

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------ 347
             G+L+G+++     + ++     +     +++ +      A+ YA+ R           
Sbjct: 278 AKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLSTGYLNALEYAKSRVQGADLTQMTD 337

Query: 348 ------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA---- 397
                  +   P ++R++           AL    A   D A +       A++ A    
Sbjct: 338 KTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAAKVND 397

Query: 398 ---PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              PI K    + A A + E+++ +GGSG++++  I ++ R++  +S+  G+      D 
Sbjct: 398 LMLPIVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDF 457

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
                         F  + +D G +   V   +++ +     + G  R  TE+ AL + A
Sbjct: 458 -------------FFRKIVRDKGVALAHVSGQIQEFVDS---ESGNGRLKTER-ALLAKA 500

Query: 515 AALYRAGMNDIADVFLEN 532
            A  +A    +    +  
Sbjct: 501 LADVQAMAAAMTGYLMAA 518


>gi|127513796|ref|YP_001094993.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126639091|gb|ABO24734.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 602

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 150/400 (37%), Gaps = 51/400 (12%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V+  P            G   + +D     +   +     A   +  A          
Sbjct: 70  ERVQMIPETKEAWDHFADAGFLAAHYDFEDGGMQLPEIILRAAMAYFSAANTATAGYPCL 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+ +A+++    +      + P             PMQ+   A  + +TE   G+ +A I
Sbjct: 130 SLGAANLIQSFGSDEQKAKFIP-------------PMQEGRFAGTMAMTEPGQGSALADI 176

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLE 263
           T++    +DG Y ++G K F+S            + LA++EG       +  F+VP+ L 
Sbjct: 177 TTKAVPQADGSYLITGQKMFISGGDQSITENIIHMTLAKIEGAPAGVKGISLFIVPKFLV 236

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKIL 315
           +     G  N +    L +K+G R+  +  L F       G+L+G+ +     +  M   
Sbjct: 237 NDDGSQGERNDVALAGLLHKMGFRNTTSTVLSFGEKGGAVGYLVGEPHKGLAYMFQMMNE 296

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIA 363
             +     +          ++ YAR R   G              ++    ++R +    
Sbjct: 297 ARIFVGSTAAVLGYQGFNASLEYARERPQ-GRLPSNKDPESKQIPIVQHADVRRMLLAQK 355

Query: 364 LDIAAATALSFRLANSF------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
             +  + AL    ++ F      D  ++R +      ++ PI K W  K A      A++
Sbjct: 356 AYVEGSLALCLYASSLFEDSHTADTPEARQQAFMLLDLLTPIVKSWPSKYALKANDLAIQ 415

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +GGSGYI E  + ++YR++  N I  G+     LD+L  
Sbjct: 416 VLGGSGYIREYPVEQYYRDNRLNPIHEGTEAIHGLDILGR 455


>gi|25284663|pir||B90929 probable oxidoreductase ECs2402 [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 gi|25284697|pir||F85777 probable oxidoreductase Z2723 [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12515700|gb|AAG56682.1|AE005392_8 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
 gi|13361869|dbj|BAB35825.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
 gi|209769058|gb|ACI82841.1| putative oxidoreductase [Escherichia coli]
 gi|209769060|gb|ACI82842.1| putative oxidoreductase [Escherichia coli]
 gi|209769062|gb|ACI82843.1| putative oxidoreductase [Escherichia coli]
 gi|209769064|gb|ACI82844.1| putative oxidoreductase [Escherichia coli]
 gi|209769066|gb|ACI82845.1| putative oxidoreductase [Escherichia coli]
          Length = 401

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|94313335|ref|YP_586544.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357187|gb|ABF11275.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Cupriavidus metallidurans CH34]
          Length = 410

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 98/295 (33%), Gaps = 13/295 (4%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K        + +  +      +  GL+E   G+D+  + ++  +  D        +W  +
Sbjct: 123 KHLHPSVFESVQPELASGDKTMCFGLSEPDAGSDVFGMRTRATRDGDHWVLNGTKQWITN 182

Query: 237 SPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +P +D  ++ A  +    R     +          G     +   +G+       +   N
Sbjct: 183 APYADYAMVFAVTDEEKARAHKGGITGFFLPTRTPGFSVPSVIPTMGHLGADIGIISLEN 242

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                   LG ++       D      L  A   +     +L +A+ YA+ R   G  + 
Sbjct: 243 VRVPDTHRLGPVDRGLSVALDGVNAGRLSMAASCLGLAEWALEQAVAYAKVRKTFGQPIG 302

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           D   ++  +A+ A+DI A  ++    A   D     ++E         I K    +MA  
Sbjct: 303 DHQAVQIMLAECAMDIYATKSMVRHCAWLVDNDLPATKE-------VSIIKASSTEMAGR 355

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           V   AM+  GG G   E  +   YR      I  G+       +   L  G   F
Sbjct: 356 VFDRAMQIHGGMGLTNELRLEAGYRFVRTMRIPDGTSEIQRRTIARRLLDGDTAF 410


>gi|269124543|ref|YP_003297913.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309501|gb|ACY95875.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 610

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 93/527 (17%), Positives = 192/527 (36%), Gaps = 86/527 (16%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKE------LELLGEYVLSCTAQELARMANYNTPQLHAY 87
            N +        L+   P     E      LE +        A      A+ N P    +
Sbjct: 13  FNLFEV-FNRQELLGKGPYADLDEETARSILEEVNRLATGVIADSF-EDADRNPPV---F 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P       V    ++    +  +    + +     F      ++     A   L     
Sbjct: 68  DP---ESGTVTMPESFKKSYQAYMDAEWYRADLVPEFGGTGAPRSLTWAIAEQIL-GSNP 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + +     A ++  + TP   + +A     R++  T             + LTE   
Sbjct: 124 AVFMFASGPGFAQILWQIGTPEQKR-FAELALERKWGAT-------------MVLTEPDA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCF 256
           G+D+ A  ++  +  DG + + G K F++S   D       ++LA+ EG       +  F
Sbjct: 170 GSDVGAGRTKAIQQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGAGPGTKGLSMF 229

Query: 257 LVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
           LVP+ L +      G  NG+    ++ K+G + + T EL F       G+L+G ++    
Sbjct: 230 LVPKYLVNLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGEKHPAIGYLVGGVHEGIK 289

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  +     +     +++ +      A+ YA++R   G              +   P +
Sbjct: 290 QMFLIIEYARMMVGTKAIATLSTGYLNALEYAKQRVQGGDMTQMADKTAPRVTITHHPDV 349

Query: 356 KRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMA 408
           +R++           AL    A   D       E +          ++ P+ K +  + A
Sbjct: 350 RRSLMTQKAYAEGMRALVMLTATYQDAIQVAKHEGREDKLAEKLNDLLLPVVKGFGSERA 409

Query: 409 PAVI-AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            A++ +E+++ +GGSG++++  I ++ R+S  +++  G+     +D+             
Sbjct: 410 YALLGSESLQTLGGSGFLQDYPIEQYIRDSKIDTLYEGTTAIQGMDL------------- 456

Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
            F  + +D G + + +   ++  ++    D G  R  TE+ AL   A
Sbjct: 457 FFRKILRDNGEALRHLAGEIKAFVAS---DAGNGRLKTER-ALLGKA 499


>gi|119873447|ref|YP_931454.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum
           islandicum DSM 4184]
 gi|119674855|gb|ABL89111.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum islandicum DSM
           4184]
          Length = 380

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 130/376 (34%), Gaps = 27/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+  +      LLR     GL        +          +        A    
Sbjct: 26  PNARRIDQGWYP---KELLREMGELGLLAPHAPPEYGGPGLDFRSMVIVVEELAKASPA- 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L + +    SM+                 S E       P  +    I   L+E   G
Sbjct: 82  --LATVTEVQGSMIVYD---------LIHYASGELKEKWLEPAIRGEKIIAFALSEPCCG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           +D  ++ +  +++           W  S   +DAF++ A+    +     V   L +   
Sbjct: 131 SDAFSLETTAERVGGSWVINGTKLWITSGLYADAFLVAARTGSPKEKHKTVTLFLVERGR 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
             +    +   +G R   T E++F+N       ++G LN +   V +           + 
Sbjct: 191 C-VETAPVA-VMGVRGTGTAEVKFNNCEVGDEAIVGGLNGAFKVVLEDLNNGRTCVGAIG 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   + ++ EA  Y +RR      +I+  V++  IA I   I A   + +  A   D   
Sbjct: 249 LGIAQGAIKEAESYTKRRVAFDMPIINFQVVQHYIASIKAQIEAVRGVVYTAAYFRD--- 305

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              + +    + A I KY   ++A      AM+ +GG GY  +  +   YR++ A  I  
Sbjct: 306 ---KNSELFPLYAQIAKYLGSRLAVDATRTAMQIMGGFGYSTDSKVEMLYRDAKATEIYE 362

Query: 445 GSGNAMVLDVLNLLEK 460
           G+   ++  +  L EK
Sbjct: 363 GANEIVLNTLFKLAEK 378


>gi|262198062|ref|YP_003269271.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081409|gb|ACY17378.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 392

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 120/359 (33%), Gaps = 32/359 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A++      GL  +     +         + + A  +  +       +   S      +
Sbjct: 52  RAIVSEMGARGLLGATLPERWGGAGVNHVCYGLIAREIERVDSGYRSAMSVQSSLVMYPI 111

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + P + S E             +    GLTE   G+D   + +  +K +
Sbjct: 112 FAYGTDEQRGTYLPGLASGE-------------LVGCFGLTEPDAGSDPGGMRTTAKKTA 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  +SP++D F++ A+ +           + D    GL   +++ K+  R
Sbjct: 159 DGYVLSGTKTWITNSPIADVFVVWAKSDPDGKIRG---FVLDKGMKGLTAPKIEGKMSMR 215

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++ T ++   +        L   TG          L+ A   ++   +  AE   +A R 
Sbjct: 216 ASITGQIAMDDVAVPESALLPEVTGLRGPFG---CLNKARFGIAWGALGAAEFCWHAARQ 272

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R + G  L    ++++ +AD+  +IA       R     DE          A    
Sbjct: 273 YTLDRTMFGRPLAATQLIQKKLADMQTEIAIGLQACLRAGRMMDEG-------TLAPEAI 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + K      A  +   A +  GG+G +++  + RH       +   G+ +   L +  
Sbjct: 326 SLIKRNSAGKALDIARLARDMHGGNGIVDDFHVIRHMMNLETVNTYEGTHDIHALILGR 384


>gi|226358241|ref|YP_002787980.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
 gi|226319884|gb|ACO47878.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115]
          Length = 598

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/530 (17%), Positives = 187/530 (35%), Gaps = 69/530 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD-KVEFHPAWHAL 106
           +     V++++  L   V        AR A+ N P            D KV   P     
Sbjct: 30  SEHSREVYEDILNLAYTVADRHFAPHAREADLNEP---------HVVDGKVRLVPGVAQA 80

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           L      G   +  D     +             +  A +        ++ +A++  +  
Sbjct: 81  LAAFRDAGFFSAHHDEELGGLQLPWVVMQAVQAHFQAANVGTSGYAFLTIGNANLQRVFA 140

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P   + +               P+ +      + L+E   G+ +A IT+      DG Y
Sbjct: 141 SPEQQQRYM-------------LPLLEGRWLGTMALSEPHAGSGLADITTTAAPRGDGTY 187

Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE-----DGSPNGL 270
            ++G K ++S    +       ++LA+++G       +  FLVPR         G  N +
Sbjct: 188 SITGTKMWISGGEHELSENIVHLVLARIQGAPAGVKGISLFLVPRYRVQDDGSPGECNHV 247

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               L +K+G R      L F     T G L+G+       +  M     +   + +V  
Sbjct: 248 VLAGLNHKMGYRGTTNTLLNFGEGGETIGELVGEPGRGLAQMFYMMNEARIGVGMGAVML 307

Query: 328 MRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRL 376
                  ++ YAR R                 +I    ++R +      +    AL    
Sbjct: 308 GYAGYLASLEYARERLQGRPASQKDPLSPPVPIIRHADVRRLLLRQKAFVEGGLALGLYA 367

Query: 377 ANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++  D+ ++  E+          ++ P+ K W  K +   +++A++ +GG+GY  +  + 
Sbjct: 368 SSLVDDLQTGPEDGREDVHLLLDLLTPLVKSWPSKYSQEALSDAIQVMGGAGYTRDFPVE 427

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSS---------G 480
            +YR++  N I  G+      D+L     + G    + L S ++ DL +S          
Sbjct: 428 MYYRDNRLNPIHEGTEGIQGNDLLGRKITQAGGRGLQVLLSRIQADLRASEDLDGLDEIR 487

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             + T +  S    +     A  +   + LA++ +AL   G   I  ++L
Sbjct: 488 AALATAVNQSTQALQALLSQAGQIGPDLYLANANSALEMLGHTVIGWMWL 537


>gi|169631612|ref|YP_001705261.1| putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC
           19977]
 gi|169243579|emb|CAM64607.1| Putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 386

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 137/379 (36%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLE 147
           P     D  +  P  +A++ +    GL    +   +  +                A Q  
Sbjct: 29  PAAAHHDATKTFP--YAVVAQMGEMGLFGLPFPEEYGGMGGDYFALCLTLEELARADQSV 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L +     A  V    +    + W P++ S                    GLTE  G
Sbjct: 87  AITLEAAVSLGAMPVYRYGSEEQKQRWLPELASG-------------KSLAAFGLTEPGG 133

Query: 208 GTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGR--VGCFLVPRLL 262
           GTDI  +I ++  +  +G + ++G K F+++  +D   ++  A V GR   G   +  + 
Sbjct: 134 GTDIPGSIRTRAVED-NGSWVINGAKAFITNSGTDITAVVGVAAVTGRSADGSPEISVIH 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLD 319
                 G   +   +K+G  ++ T  L F +        L     G    ++IL    + 
Sbjct: 193 VPSGTPGFTVEPGYDKVGWHASDTHPLSFDDVRVPYENLLGERGRGYAGFLRILDEGRIA 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A ++    +  + E++ YAR R   G  +ID   +   IA +      A    +  A  
Sbjct: 253 IAAVATGAAQGCVDESLRYARSRPAFGSAIIDYQSVSFKIARMQARAHTARLAYYHAAAL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
               K    E       A I K    + A     +A +  GG+G++ E  +AR YR+S  
Sbjct: 313 LLAGKPFKTE-------ASIAKLIASEAAMDNARDATQIFGGAGFMNESPVARQYRDSKI 365

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    ++ +   L
Sbjct: 366 LEIGEGTSEVQLMLIARAL 384


>gi|87122133|ref|ZP_01078017.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
 gi|86162680|gb|EAQ63961.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121]
          Length = 705

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 162/483 (33%), Gaps = 94/483 (19%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P +  L +     G         ++ +            +++ A          +
Sbjct: 94  KVILPPGFEQLWQSYKEAGWGRLGSPLEYDGLGAPYLISQSINEIFMGANPAFMIYSGFA 153

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +  ++      ++   +               P+ K   A  L +TE   G+D+  I 
Sbjct: 154 SPALYLIDKFGDDQLKSRFCE-------------PLAKNDFAACLCMTEPDAGSDVGNIR 200

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV------GCFLVPR---- 260
           ++  K  +G+Y + G K F+S+ M D     A+I+LA+VEG         CF+VPR    
Sbjct: 201 TKAVKQDNGLYRIEGEKIFISAGMHDLNDNIAYIVLARVEGAKKGTVGLSCFVVPRYELE 260

Query: 261 --------------------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
                                ++    NG+   RL+ K+G    AT ++ F      +G+
Sbjct: 261 GEAKEATTPNHEERDSRLGSFIDSRLDNGVRCVRLEQKMGLHGCATAQISFGQAAPCYGY 320

Query: 298 LLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGI- 348
           LLG+  NV    +  M  L  + + I ++     +   A  YA  R              
Sbjct: 321 LLGERENVGLKQLMTMMNLARIATGIYALGMASSAYLNAAEYAGNRIQGTSFKEAFNPRA 380

Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------------------EA 383
               +I+   +KR + ++   +    AL  +L                          E 
Sbjct: 381 QRVAIIEHIDVKRMLLEMKSKVEGCRALILKLCMHQSQLMNLNIRLANPEQFEQSPTAED 440

Query: 384 KSRSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           K + E  AY        + PI K +    A  V   +++  GG GYI +  + ++ R+  
Sbjct: 441 KEKIEAQAYRHQSLVNLLTPIVKAYTSDQAFHVAETSIQVYGGHGYISDNPVEQYARDIK 500

Query: 439 ANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
             S+  G+      D+      + + + L       +   L ++ K             K
Sbjct: 501 VMSLWEGTNFVQSADLFRDKLAMGRNSKLLALYQEEIMSFL-TTAKSDEATFSAFAPQAK 559

Query: 496 EDK 498
             +
Sbjct: 560 RLE 562


>gi|258578057|ref|XP_002543210.1| hypothetical protein UREG_02726 [Uncinocarpus reesii 1704]
 gi|237903476|gb|EEP77877.1| hypothetical protein UREG_02726 [Uncinocarpus reesii 1704]
          Length = 543

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/451 (18%), Positives = 154/451 (34%), Gaps = 43/451 (9%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            F  +  ++  +      + + +  H  L       +    +                 P
Sbjct: 117 PFGDLVPFADPAWYQGYFSPYYNETHAALRDEVRQWVETEIE-----------------P 159

Query: 90  GGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               WD+ +  P +    +  R    GL    +D S      K     +    + +   +
Sbjct: 160 HVHEWDEAKKVPDYIYKQMGERGYLAGLLGVGYDASLSKNTVKSVPPEKWDLFHEIIVTD 219

Query: 148 AGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +      +++       P +      K   +E        +      I L +TE 
Sbjct: 220 ELSRCASGGVVWNLIGGFGIGCPPLL-----KFGRKEVVQRVVPGILAGDKRICLAITEP 274

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D++++T + +   DG  Y ++G K ++++ +   +  +A   G  G   V  LL +
Sbjct: 275 DAGSDVSSLTCEAKLTPDGKHYIVNGEKKWITNGVWADYFTVAVRTGENGMNGVSVLLIE 334

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G+  +R+ +  G  S+ T  + F +       L+G  N     +        +   
Sbjct: 335 RDFGGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENKGFKVIMTNFNHERVGII 393

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRLA 377
           I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++  
Sbjct: 394 IQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASYNWLENIIYQCQ 453

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHY 434
           N  D   S     A A + A  T  +          EA +  GG  Y        + R Y
Sbjct: 454 NYDDMEASLRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYSRGGQGGKVERLY 508

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           R+  A +I  GS   M+   +    K    F
Sbjct: 509 RDVRAYAIPGGSEEIMLDLSMRQSLKVHKAF 539


>gi|148652811|ref|YP_001279904.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp.
           PRwf-1]
 gi|148571895|gb|ABQ93954.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1]
          Length = 601

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/448 (15%), Positives = 152/448 (33%), Gaps = 52/448 (11%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
               H G     +D     +   +      A  ++ A          +  + +++     
Sbjct: 84  DAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAANPSTTAYPFLTTAAINVLMHFAN 143

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             V + + P++ S ++  T             + LTE   G+ +A I +      DG Y 
Sbjct: 144 DEVKQAFVPRMLSGDFTGT-------------MALTEPHAGSSLADIRTTATPHDDGTYR 190

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLEDG----------SPNGLC 271
           + G K ++S    +       ++LA+V G   G   +                   N + 
Sbjct: 191 IRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDASGKPAERNDVH 250

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              L +K+G R   +  L F +     G+L+G+++     +  M     +     +    
Sbjct: 251 LAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARIAVGFGAAMIG 310

Query: 329 RVSLAEAIHYARRRHVSG-----------GILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 ++ YA+ R                 +I+   +KR +           AL    +
Sbjct: 311 YRGYQYSLAYAKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGS 370

Query: 378 NSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           N  D   +  ++      +    ++ P+ K W  +  P      ++ +GG+GY  E    
Sbjct: 371 NLIDRINTCDDDTQKQALSELLDLLTPVLKAWPSEYGPKANDLGIQVLGGAGYTREYQAE 430

Query: 432 RHYRESPANSILLGSGNAMVLDV--LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + +R++  N I  G+     LD+    L +      + L   + +DL +        L +
Sbjct: 431 QFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAISTSQTAKLAN 490

Query: 490 SIS-LCKEDKGLARFLTEKIALASSAAA 516
            +    ++ + L + + + ++   +A  
Sbjct: 491 KLQIYIEQLQPLLQHVGQTLSTPKAATL 518


>gi|315445503|ref|YP_004078382.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263806|gb|ADU00548.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 393

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 33/400 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +        +A     +  A  P  E W+     P    +   +   GL        +  
Sbjct: 7   TDDHLAFGELARDFAAKAVA--PHYEAWEDAGIIP--RDVFTEAGALGLLGFAAPEQYGG 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSRE 182
           V                A      ++      A    +  +  VH D    +   + + E
Sbjct: 63  VG--------------TADFRYNQILVERFMDAGCGGVGLSFAVHNDICLPYLADLTTHE 108

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +   +G+TE   G+D++ I +      D    ++G K F+++  +  
Sbjct: 109 QKKRWLPGFVGGRLIAAIGMTEPGAGSDLSGIRTSAVDKGDHF-LVNGAKTFITNGQNAD 167

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A          +  L+ +   +G    R  +K+G     T EL F++        L
Sbjct: 168 LVITAVRTSPDRHRGLTLLVMERGLDGFERGRNLDKLGLHCQDTSELTFTDVKVPKENVL 227

Query: 303 N-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             V  G    M+ L    +  A+ S+  +R +L   + Y R R   G  +      + ++
Sbjct: 228 GEVGDGFAHMMRNLAQERMQIAVGSLGRIRAALDWTVTYVRERTAFGKPIGALQNTRFSL 287

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A  +A   A         +E +  + +AA A++ A  T++ C       +    +  
Sbjct: 288 ADVATQLAVTQAFIDNCVIELNEGRLTAADAAMAKLWASETEFRC-------LDACQQLF 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GG GY+ E  IAR   ++    +  G+   M   +   L 
Sbjct: 341 GGYGYMREYPIARAAIDARITRVYGGTSEIMREIIGRDLR 380


>gi|307944794|ref|ZP_07660132.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307772008|gb|EFO31231.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 405

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 126/369 (34%), Gaps = 34/369 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMV 162
             +       GL        +             AR           +MS  S      +
Sbjct: 63  REIFNEMGELGLLGITLPADYGCAGASYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPI 122

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + + PK+ S EY                 GLTE   G+D A + ++  K  
Sbjct: 123 YAYGSEEQRQKYLPKLASGEY-------------VGCFGLTEPDAGSDPAGMRTRAIKTD 169

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D F++ A+ E   G   +   + +    GL   ++  K+  R
Sbjct: 170 SGYRLTGSKMWISNSPIADVFVVWAKSEAHDGA--IRGFVLEKGMKGLSAPKVGGKLSLR 227

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AI 336
           ++ T E+   N         +     V  +K     L+ A   +S   +  AE     A 
Sbjct: 228 ASITGEIVMDNVEV----GEDALLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCWTRAR 283

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  L    + ++ +AD+  +IA     + R+   FD  +        A  M
Sbjct: 284 QYGLEREQFGRPLAQTQLFQKKLADMQTEIALGLQAALRVGQLFDAGQV-------APEM 336

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +  +A +  GG+G  EE  + RH +     +   G+ +   L +L 
Sbjct: 337 ISLIKRNNCGKALDIARQARDMHGGNGIQEEYHVMRHAQNFETVNTYEGTHDVHAL-ILG 395

Query: 457 LLEKGTNLF 465
             + G   F
Sbjct: 396 RAQTGLQAF 404


>gi|218755058|ref|ZP_03533854.1| acyl-CoA dehydrogenase fadE25 [Mycobacterium tuberculosis GM 1503]
 gi|289763463|ref|ZP_06522841.1| predicted protein [Mycobacterium tuberculosis GM 1503]
 gi|289710969|gb|EFD74985.1| predicted protein [Mycobacterium tuberculosis GM 1503]
          Length = 236

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 15/231 (6%)

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   S  + ++A  +   G   +   +      G      + K+G + + T EL F N  
Sbjct: 15  NGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCR 74

Query: 296 GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349
              +    +   P    K  L  LD    ++    V +A+     AI Y + R   G  +
Sbjct: 75  ---IPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESI 131

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                ++  +AD+A+ + AA  + +  A   +  +           ++  +K +   +A 
Sbjct: 132 STFQAVQFMLADMAMKVEAARLMVYSAAARAERGEPD------LGFISAASKCFASDVAM 185

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V  +A++  GG+GY  +  + R  R++    I  G+     + +   L +
Sbjct: 186 EVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR 236


>gi|292654389|ref|YP_003534286.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291371260|gb|ADE03487.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 387

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 129/358 (36%), Gaps = 27/358 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G +    D    P + ++A+ +    L                     +  
Sbjct: 46  DLIPKMGDLGFYAPNLDGYGLPGLGERAYGLLMQELEAGDSGLRSMASVQGSLVIYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W PK+ S E                  GLTE + G+D + + ++ ++ +DG
Sbjct: 106 YGSDEQKQRWLPKLGSGE-------------AVGCFGLTEPQHGSDPSGMETRAERDADG 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNR 282
                   W  +SP++D  ++ A+    V     P    L +   +G+   +++ K+  R
Sbjct: 153 YVLNGSKTWITNSPIADVAVVWAR---DVSAEGSPVRGFLVETDRDGVTTNKIEGKLSMR 209

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYAR 340
           ++ T E+   +        L    G    +  L       A   V   R +  +A  YA+
Sbjct: 210 ASVTGEIGLDDVRVPEEDVLPGVEGMNGPLSCLTQARFGIAWGVVGAARDAFEDARQYAK 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG +    + +  +A++A  I  A  ++ RL +  +    R ++ + A+      
Sbjct: 270 DRDQFGGPIARFQLQQGKLAEMATQITNAQLMAHRLTDLKERGDLRHQQVSMAKRH---- 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                ++A  V   A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 326 ---NVRVAREVTRTAREMLGGNGITTDYSPMRHMENIETVYTYEGTDDIHTLVLGADL 380


>gi|306843953|ref|ZP_07476548.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1]
 gi|306275708|gb|EFM57432.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1]
          Length = 394

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 128/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 53  ELFRLMGQAGLLGVTLPEDYGAANASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D A + ++ +KI  
Sbjct: 113 AYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGMKTRAEKIDG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+         +   + +    GL   ++  K+  R+
Sbjct: 160 GYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPKIGGKLSLRA 217

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+            L +++   GP         L+ A   +S   +  AE     A
Sbjct: 218 SITGEIVMDGVEVPEDAILPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCWFRA 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R      L    + ++ +AD+  +IA     S R+   FDE K        A  
Sbjct: 272 RQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-------MAPE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 325 MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|283833363|ref|ZP_06353104.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|291071008|gb|EFE09117.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 383

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 139/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     +R    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTATYP--KEFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ M+    A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTMETGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D    G+  
Sbjct: 137 TTSYTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSKKPGIKV 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   +        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDDVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADQEQSLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|242786918|ref|XP_002480899.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218721046|gb|EED20465.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 608

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 117/574 (20%), Positives = 205/574 (35%), Gaps = 87/574 (15%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQ 71
           +PS S     Q    I    Y  D  L+ +I+ +     PS +  +L    + VLS    
Sbjct: 2   EPSSSTKGFFQLKPTIPP-QYLEDRALLRIISLYLPTPLPSTISSDLLRFSKLVLSKPVL 60

Query: 72  ELARMANYNTPQLHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
                A  N P L      GE  R D +     W  L    I +G+    ++++      
Sbjct: 61  GYIADAEKNLPYLKPLTSFGEENRDDPLVTSEGWRRLQEIGIEEGIVALAYEKNSNGEKA 120

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               +I     Y +    +  +  PS  +     L+    +H D               +
Sbjct: 121 GWNPRIHQFVKYHIWSGSSAIVTCPSAMTDGAAKLLG-KHLHDDPETNEIFAHARERLIS 179

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD------------GIYCLSGHKWFLSS 237
                +   G  +TE++GG+D+    +   K++D            G + + G KWF S+
Sbjct: 180 RQNGFAWTSGQWMTERKGGSDVRGTETIAVKLNDATDGYDTNGQPLGPWRIDGFKWFSSA 239

Query: 238 PMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSP-------NGLCYQRLKNKIGNRS 283
             ++  I+LA+  G        +  F  P               NG+  QRLKNK+G R 
Sbjct: 240 TDANMTILLAKTGGGSDRKDSQISAFYAPLRRRANGSDENQTELNGIRIQRLKNKLGMR- 298

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
                       G+L+G        +  +  +  + + I +V      LA +  +AR R 
Sbjct: 299 ------------GYLIGKEGQGVKEISHILNITRMQNIISAVGAYGRGLAISRAFARVRS 346

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------------------AK 384
           VSG +L D     R +A   ++  A   LS+ +A                         K
Sbjct: 347 VSGKLLSDVSAHVRGLAQEHVNYTAHMHLSYFIAALLGRSEGFEPGDDTSAATSSGILPK 406

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE----ERSIARHYRESPAN 440
           +  E  A  R++ PI K      A + +   ME +GG GY+E    + +IAR +R++   
Sbjct: 407 TMEEINALYRLLTPIAKAQTALSAISGLRSCMESLGGVGYLENEDPDLNIARLFRDANVL 466

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLF-------STLEQDLGSSGKKVITILRDSISL 493
           +I  G+ + M  D + ++++G +  + L        ++L    G+  K     L+++   
Sbjct: 467 AIWEGTTDVMADDFVRVVKRGKDGMKILAVFEGWVGNSLRVAEGAGLKAEAAKLKNTAER 526

Query: 494 C---------KEDKGLARFLTEKIALASSAAALY 518
                     +E     R     +        L 
Sbjct: 527 VLMDLRGKEKEELAWRGREYLRDLDWLVCGCLLI 560


>gi|307295312|ref|ZP_07575151.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878815|gb|EFN10034.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 394

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 138/405 (34%), Gaps = 48/405 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++  TA+  A+  N     + A+       +  +  P     +      GL       
Sbjct: 23  ERMIRDTARAYAQD-NLQPRVMEAF-------EHEQTDPGIFREMG---ALGLLGPTIPD 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  V     A+ + A  +  +       +   S      +    +      + PK+ S 
Sbjct: 72  QYGGVGASYVAYGLIAREVERVDSGYRSMMSVQSSLVMHPIYAYGSEEQRLKYLPKLASG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +Y                 GLTE   G+D   + ++  K  DG        W  ++P++D
Sbjct: 132 DY-------------IGCFGLTEPDAGSDPGGMRTRATKTPDGYRLSGNKTWISNAPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FL 298
            F++ A+ +   G   +   + +    GL   +++ K+  R++ T  +           L
Sbjct: 179 VFVIWAKSDAHGGA--IRGFVLEKGMKGLSAPKIEGKLSLRASITGMVNLDEVEVGEEAL 236

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
           L D+    GP         L+ A   +    +  AEA  +A R     R   G  L    
Sbjct: 237 LPDVEGLKGP------FGCLNRARYGIGWGSMGAAEACFHAAREYGLDRKQFGRPLAATQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + ++ +AD+  DI      S R+    D+ +       +A  M  + K      A  +  
Sbjct: 291 LYQKKLADMLTDITLGLQASLRVGRLMDDGR-------FAPEMVSLIKRNNVGKALDIAR 343

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A +  GG+G   E  + RH       +   G+ +   L +   +
Sbjct: 344 MARDMHGGNGISGEYPVMRHMVNLETVNTYEGAHDVHALILGRAI 388


>gi|307185584|gb|EFN71538.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Camponotus floridanus]
          Length = 353

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 133/383 (34%), Gaps = 84/383 (21%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    P     +++    GL       +             A          A
Sbjct: 48  PIAAKIDKKHLFP--KEQIKKMGDLGLMGLCIPEALGGTGLDTLAYAIAMEEISRGCAAA 105

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS   +     +    T +  + +     + E                   L+E   
Sbjct: 106 GVIMSVQNSLYLGPINKFGTDKQKEKYITPFVTGE-------------KIGCFALSEPGN 152

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +                                                
Sbjct: 153 GSDAGAASTTAK------------------------------------------------ 164

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
                 + ++K+G R ++T  L F +         NV + P    KI ++ LDS  + ++
Sbjct: 165 ----ASKKEDKLGIRGSSTCSLIFEDCQVPRD---NVLSEPGMGFKIAMMTLDSGRIGIA 217

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A+A     I YA +R   G  +I    +++ IAD+AL + ++  L++R A   D
Sbjct: 218 GQALGIAQASLDCAIDYAAKRQAFGQSIIKLQTIQQKIADMALRLESSRLLTWRAAQLKD 277

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             KS ++EAA A++ A  T  +C         + ++ +GG GY+ +    RHYR++    
Sbjct: 278 NDKSYTKEAAMAKLSASETATFC-------AHQCIQILGGMGYVSDMPAERHYRDARITE 330

Query: 442 ILLGSGNAMVLDVLNLLEKGTNL 464
           I  G+     L +   L K  +L
Sbjct: 331 IYEGTSEIQRLVIAGNLIKEYSL 353


>gi|331642293|ref|ZP_08343428.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|331039091|gb|EGI11311.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
          Length = 401

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|34499373|ref|NP_903588.1| glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472]
 gi|34105223|gb|AAQ61579.1| probable glutaryl-CoA dehydrogenase [Chromobacterium violaceum ATCC
           12472]
          Length = 395

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 145/432 (33%), Gaps = 45/432 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
           + A     P      L LL + +             Y   +L        R ++ +    
Sbjct: 1   MAASTQRAPFAWEDPL-LLQDRLTDDERLVQQSAHEYCQERLLPRVLMANREERFD---- 55

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              ++      G      +      +   A+ + A  +  +       +   S      +
Sbjct: 56  -REIISEMGELGFLGCTIEGYGCAGLSHVAYGLVAREVERVDSGYRSAMSVQSSLVMHPI 114

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + P++ S E+                 GLTE   G+D A++ ++ +K+ 
Sbjct: 115 WAYGSDAQKDKYLPRLASGEW-------------LGCFGLTEPDSGSDPASMKTRARKVD 161

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP +D F++ A+ +       +   + +    GL    +  K   R
Sbjct: 162 GGYLLSGSKMWITNSPAADVFVVWAKDDDDE----IRGFILEKGMKGLSAPAIHGKFSLR 217

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+   +       LL  +    GP         L+ A   ++   +  AE   +A
Sbjct: 218 ASITGEIVMDDVLVSEDQLLPGVKGLKGP------FGCLNKARYGIAWGAMGAAEFCWHA 271

Query: 340 RR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            R     R   G  L    +++  +A++  +IA   + + ++    DE ++       A 
Sbjct: 272 ARQYTLDREQFGRPLAANQLIQLKLANMQTEIALGLSAALQVGRLMDEGRA-------AP 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A  +   A +  GG+G  +E  + RH     A +   G+ +   L +
Sbjct: 325 EMISLIKRNNCGKALDIARVARDMHGGNGICDEFHVIRHVMNLEAVNTYEGTHDVHAL-I 383

Query: 455 LNLLEKGTNLFE 466
           L   + G   F 
Sbjct: 384 LGRAQTGIQAFA 395


>gi|311747232|ref|ZP_07721017.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578944|gb|EAZ83108.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 398

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 115/302 (38%), Gaps = 34/302 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    K + PK+ S +                  GLTE   G++ + + +  
Sbjct: 114 MYPIYKFGSEEQRKKYLPKLASGDM-------------LGCFGLTEPDHGSNPSGMVTNF 160

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           + + D         W  +SP +D  ++ A+  EGR+   +V R +E     G       N
Sbjct: 161 KDMGDYYLLNGAKMWISNSPEADIAVVWAKNEEGRIHGLIVERGME-----GFTTPTTHN 215

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334
           K   R++ T EL F N         N+          L+ LDSA   ++   +  A    
Sbjct: 216 KWSLRASCTGELVFDNVKVP---KENLLPNKSGLGAPLMCLDSARFGIAWGAIGAAMDCY 272

Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  YA  R      +    ++++ ++++  +I  A  L++++    +E K+++     
Sbjct: 273 ESARKYAAERIQFDKPIASFQLVQKKLSEMLTEITKAQLLAWKVGKMMNEGKAKT----- 327

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             +   + K    +MA  +  EA +  GG G   E  I RH     +     G+ +  +L
Sbjct: 328 --VHISMAKRNNVEMALNIAREARQIHGGMGITGEYPIMRHMMNLESVITYEGTHDIHLL 385

Query: 453 DV 454
            +
Sbjct: 386 IL 387


>gi|118473445|ref|YP_884819.1| acyl-CoA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|51507244|gb|AAU04876.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174732|gb|ABK75628.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 611

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 91/521 (17%), Positives = 186/521 (35%), Gaps = 68/521 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
                + L  +        A+      + N P    + P       V     +   +R  
Sbjct: 35  ADTAREMLTEIARLAEGPIAESFVE-GDRNPPV---FDPETH---TVTLPEGFKKSMRAL 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G            +   +A +       L A   A ++ +     + +     T   
Sbjct: 88  FDGGWDKVGLAEHLGGIPMPRALQWALIEHILGANPAA-YMYAMGPGMSEIFYNNGTDEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA                 +      + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 147 KK-WA-------------TIAAERGWGATMVLTEPDAGSDVGAGRTKAVQQPDGTWHIEG 192

Query: 231 HKWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCY 272
            K F++S  SD        ++LA+ EG       +  F VP+   D      G  NG+  
Sbjct: 193 VKRFITSADSDDLFENIMHLVLARPEGAGPGTKGLSLFFVPKFHFDHETGEIGERNGVFV 252

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + +AT EL          G+L+G+++     + D+     +     +++ +
Sbjct: 253 TNVEHKMGLKVSATCELSLGQHGIPAVGWLVGEVHNGIAQMFDVIEQARMMVGTKAIATL 312

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
                 A+ YA+ R                  +   P ++R++           A+    
Sbjct: 313 STGYLNALEYAKERVQGADMTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRAIYLYT 372

Query: 377 ANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A   D               A    ++ PI K +  + A A + E+++ +GGSG++++  
Sbjct: 373 ATFQDAEVAQAVHGVDGDLAARVNDLLLPIVKGFGSETAYAKLTESLQTLGGSGFLQDYP 432

Query: 430 IARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL-GSSGKKVITI 486
           I ++ R+S  +S+  G+      D     ++         +   +EQ +   +G   +  
Sbjct: 433 IEQYIRDSKIDSLYEGTTAIQAQDFFFRKIIRDKGQALAYVAGEIEQFIKNENGNGRLKT 492

Query: 487 LRDSISLCKED-KGLARFLTEK-IALASSAAALYRAGMNDI 525
            R+ ++    D +G+A  LT   +A    AA++Y+ G+  +
Sbjct: 493 ERELLATALADVQGMAASLTGYLMAAQEDAASIYKVGLGSV 533


>gi|315441994|ref|YP_004074873.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315260297|gb|ADT97038.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 611

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 98/530 (18%), Positives = 188/530 (35%), Gaps = 91/530 (17%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--------MANYNTPQLH 85
            N +     ++AL     +    +L+L     +   A ELA           +   P   
Sbjct: 13  FNLFE----VLALEKALATGDFGDLDLQSARDMLAQAVELAEGPVAEAFSETDRRPP--- 65

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           ++ P       V     +    R                  V      +     L L AQ
Sbjct: 66  SFDPATHV---VSIPEPFKKSFRAWYDGEWFRVGMAEEIGGVPAPSMLEWAINELALGAQ 122

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             A    +    +  + A+       + WA  +  R +  T             + LTE 
Sbjct: 123 PAAFMYAAGPKMAHILHAIGN--EQQRHWAGLMIERAWGAT-------------MVLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD------AFIMLAQVEG------RV 253
             G+D+ A  ++  +  DG + L G K F+++  +D        ++LA+ EG       +
Sbjct: 168 DAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDTDDLFENIVHVVLARPEGAGPGTKGL 227

Query: 254 GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLN 303
             F+VP+   D      G  NG+    L++K+G +++AT EL F        G+L+ D +
Sbjct: 228 SLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLVNDTH 287

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILID 351
                +  +     +     +++ +      A+ YA+ R                  ++ 
Sbjct: 288 SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTRIQGADMIQMTDKTAPRVTIMH 347

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARI----MAPITKYWC 404
            P ++RA+           AL    A   D   +      +AA A      + PI K   
Sbjct: 348 HPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLLPIVKGVG 407

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            + A   + E+++  GGSG++++  + ++ R++  +S+  G+      D           
Sbjct: 408 SERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGTTAIQAQDF---------- 457

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
               F  + +D G +   V++ +R  +        LA   TE+ AL ++A
Sbjct: 458 ---FFRKIARDQGGALLHVVSHMRRFLDDAAARPELA---TER-ALLATA 500


>gi|224584133|ref|YP_002637931.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468660|gb|ACN46490.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 383

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 139/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--KEFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEISKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +   + A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGAPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D +  G+  
Sbjct: 137 TTTWTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|85703119|ref|ZP_01034223.1| glutaryl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85672047|gb|EAQ26904.1| glutaryl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 407

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 140/410 (34%), Gaps = 44/410 (10%)

Query: 66  LSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   + +A  A       L        R ++V+  P     +      GL  +     +
Sbjct: 31  LSEEERMIATSARTFAQEVLQPRVIAAYREERVD--PEIFKEMG---QMGLLGTTIPEEY 85

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
             +     ++ + A  +  +       +   S      +    +    + + P + S   
Sbjct: 86  GGLGSNYVSYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRRKYLPGLASG-- 143

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       +    GLTE   G+D A + ++  +   G        W  +SP++D F
Sbjct: 144 -----------DLIGCFGLTEPDAGSDPAGMKTRAVRTDSGYRISGTKMWISNSPIADVF 192

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ A+ +   G   +   + +    GL   ++  K+  R++ T E+   N       LL 
Sbjct: 193 VIWAKSDAHDGK--IRGFVLEKGMKGLSAPKVGGKLSLRASVTGEIVMDNVEVPESALLP 250

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
           ++    GP         L+ A   ++   +  AE   +A R     R      L    + 
Sbjct: 251 NVQGLKGP------FGCLNRARYGIAWGVMGAAEFCWHASRQYGLDRKQFNRPLAQTQLF 304

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++  +I      + R+    DEA +       A  M  + K   C  A  +   A
Sbjct: 305 QLKLANMQTEITLGLQAALRVGRLMDEANA-------APEMISMIKRNNCGKALDIARHA 357

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 358 RDMHGGNGISEEFQVIRHMVNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|254390358|ref|ZP_05005575.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294813837|ref|ZP_06772480.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326442255|ref|ZP_08216989.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197704062|gb|EDY49874.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294326436|gb|EFG08079.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 608

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 85/505 (16%), Positives = 181/505 (35%), Gaps = 65/505 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P     +      ++    R  +           
Sbjct: 46  ARLAENELAESFADADRNPPV---FDP---ETNTAPIPESFKRSYRTFMESEYWRLGLPE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                   ++     A L L+    A  + S   + A ++    T    K  A     RE
Sbjct: 100 EIGGTTAPRSLVWSYAEL-LLGSNPALWMYSSGPSFAGLLYEEGTEAQRKI-AEIAVERE 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  +  DG + + G K F++S   D 
Sbjct: 158 WGST-------------MVLTEPDAGSDVGAGRAKAVRQEDGSWHIEGVKRFITSGEHDM 204

Query: 243 -----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQRLKNKIGNRSNA 285
                  +LA+ EG   G   +   L             G  NG+    +++K+G +++ 
Sbjct: 205 SENILHYVLARPEGAGPGTKGLSLFLVPKYEFDVETGELGERNGVYATNVEHKMGLKASN 264

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T E+ F +     G+L+G+ +     +  +     +     +++ +      A+ YA+ R
Sbjct: 265 TCEMTFGDRHPAKGWLIGEKHDGIRQMFKIIEFARMMVGTKAIATLSTGYLNALEYAKER 324

Query: 343 HVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-------A 383
                             +   P ++R++           AL    A+  DE        
Sbjct: 325 VQGSDLVNFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIAVKEAAD 384

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +S +E  A   ++ PI K +  + +   +A++++  GGSGY++E  + ++ R++  +++ 
Sbjct: 385 ESAAELIALNDLLLPIVKGYGSERSYEQLAQSLQIFGGSGYLQEYPVEQYIRDAKIDTLY 444

Query: 444 LGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL--GSSGKKVITILRDSISLCKEDKG 499
            G+      D     ++         L   +++ L  G+ G+ +            + + 
Sbjct: 445 EGTTAIQGQDFFFRKIVRDQGQSLNALSEEIKKFLAVGTGGEDLAGAREALTKAAVDLEA 504

Query: 500 LARFLT-EKIALASSAAALYRAGMN 523
           +   +T + IA       +Y+ G+N
Sbjct: 505 IVGAMTNDLIATGEDVKNIYKVGLN 529


>gi|171315761|ref|ZP_02904993.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171099060|gb|EDT43840.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 385

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 131/385 (34%), Gaps = 39/385 (10%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLY 141
           L    P  ERW       A        +  G H    +W  +          +     + 
Sbjct: 22  LREIAPHSERW-----RDAGCVDRDAYLKLGSHGYLLMWADAAFGGAGVDDFRYDQILIE 76

Query: 142 LMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A+        P  S      +  +        + PK  + E               + 
Sbjct: 77  ENARFGDSGFYFPLHSRLVGPYIGRLGNEAQRARFLPKAITGE-------------AILA 123

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           + +TE + G+D+A I ++ +   D  + L+G K F+S+ +    I++A          + 
Sbjct: 124 VAMTEPQTGSDLAGIRTRAEDKGDH-WLLNGSKTFISNGILADCIVVAARTSTDNPRSLG 182

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-L 318
             + +    G    R   K+G  S  T EL F N         NV   P E  + L   L
Sbjct: 183 LFVIERGMEGFERGRKLKKMGQPSQDTAELFFDNVKVP---KENVLGDPTEGFRYLTRHL 239

Query: 319 DSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +      ++  +V+    + Y + R   G  +      +  +A +  +I A     
Sbjct: 240 AEERLVGMCGYLANAQVAFDLTLDYIKERRAFGRPIGTFQNSRFMMAQMRAEIDALQTFV 299

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            +     +  +  +E AA  +++         ++   ++   ++  GGSGY+EE  I R 
Sbjct: 300 DQCVMQHNAGRLTAETAAAGKLL-------GSELECRMVDVGVQLHGGSGYMEEYRICRM 352

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           Y ++  + I  G+   M   +   L
Sbjct: 353 YTDARISRIYAGTSEIMKEIIGRSL 377


>gi|90416754|ref|ZP_01224684.1| putative glutaryl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2207]
 gi|90331507|gb|EAS46743.1| putative glutaryl-CoA dehydrogenase protein [marine gamma
           proteobacterium HTCC2207]
          Length = 394

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 130/366 (35%), Gaps = 39/366 (10%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           R+    GL     +      +   ++ + A  +  +       +   S      +    +
Sbjct: 60  RQMGEMGLLGLTIEGYGCAGMDYISYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAFGS 119

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + + PK+ S E+                 GLTE   G+D   + S+ +    G   
Sbjct: 120 ESQREKYLPKLASGEF-------------IGSFGLTEPDYGSDPGGMVSRARSTDGGYLL 166

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +SP +D F++ A+ +       +   + +    GL   +++ K+  R + T 
Sbjct: 167 NGTKTWISNSPFADVFVVWAKTDDEQ----IRGFILEKGMPGLSAPKIEGKLSLRVSTTG 222

Query: 288 ELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---- 340
           ++   + F     LL ++    GP         L++A   ++   +  AEA  +A     
Sbjct: 223 QIVMQDVFVAEEQLLPNVKGLKGP------FSCLNNARYGIAWGSLGAAEACWHAARTYT 276

Query: 341 -RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R      L    +++  +AD+  DI+       R     D++    E       +  +
Sbjct: 277 MERKQFNRPLAATQLIQLKLADMQTDISLGLQGCLRAGQLMDDSNISPE-------LISL 329

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K   C  A  +  +A + +GG+G  +E S+ RH       +   G+ +   L +L   +
Sbjct: 330 IKRNSCSKALNIARKARDMLGGNGISDEYSVMRHMMNLETVNTYEGTEDIHGL-ILGRGQ 388

Query: 460 KGTNLF 465
            G   F
Sbjct: 389 TGIAAF 394


>gi|320668719|gb|EFX35524.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 383

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      L
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQL 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|237705641|ref|ZP_04536122.1| acyl-coA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|331677568|ref|ZP_08378243.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332279156|ref|ZP_08391569.1| acyl-coA dehydrogenase [Shigella sp. D9]
 gi|26108348|gb|AAN80550.1|AE016761_125 Hypothetical protein ydiO [Escherichia coli CFT073]
 gi|91072482|gb|ABE07363.1| hypothetical protein YdiO [Escherichia coli UTI89]
 gi|115512997|gb|ABJ01072.1| acyl-coA dehydrogenase [Escherichia coli APEC O1]
 gi|226900398|gb|EEH86657.1| acyl-coA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|331074028|gb|EGI45348.1| putative acyl-CoA dehydrogenase [Escherichia coli H591]
 gi|332101508|gb|EGJ04854.1| acyl-coA dehydrogenase [Shigella sp. D9]
          Length = 401

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|311106637|ref|YP_003979490.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761326|gb|ADP16775.1| acyl-CoA dehydrogenase FadE25 2 [Achromobacter xylosoxidans A8]
          Length = 387

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 134/379 (35%), Gaps = 32/379 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+ + +P  H  L      G+        +          +               +++
Sbjct: 35  IDRDQRYPVEH--LAPLRDSGISGLFIPAEYGGAGASLTSLVAVVETVAQGCASTAAILA 92

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                A  + L  +                       + +   A+   L+E+  G+D AA
Sbjct: 93  ALSLGAFPIILGGSAEQKMVLL-------------GGLARDGHAVNFALSERGAGSDAAA 139

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +++      DG        W  +   S  FI+ A+         +   + D    G+   
Sbjct: 140 LSTTAVPEGDGWRIRGEKCWLGNGGHSRYFIVFARTGEPGARNNISAFVVDRDAPGVVVD 199

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSL 332
             ++K+G R   T  L+        +G  +V     E +K  L  L    + V+     +
Sbjct: 200 HYEDKMGIRGTTTTNLKVDTW----VGAESVVGALGEGLKLALATLSIGRVVVAAQANGI 255

Query: 333 -----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                AEA  +A +R   G  +ID   +   +AD A  ++++  +++  A ++D  +   
Sbjct: 256 ALCSYAEARDFAVQRQTFGRSIIDHQGVGFKLADAATALSSSRMMTYEAARAYDAGQDIG 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              A A+++A  T +       +V+ +AM+ + G GY++  ++ R YR+     I  G+ 
Sbjct: 316 TLGAMAKLLASETSH-------SVVDDAMQILAGRGYVKPSAVERCYRDQRITEIYEGTS 368

Query: 448 NAMVLDVLNLLEKGTNLFE 466
               + +   ++K      
Sbjct: 369 EIQRVVLARAIKKSAGAAA 387


>gi|27381488|ref|NP_773017.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27354656|dbj|BAC51642.1| bll6377 [Bradyrhizobium japonicum USDA 110]
          Length = 409

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 142/423 (33%), Gaps = 34/423 (8%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQL----HAYGPGGERWDKVEFHPAWHALLR 108
            V +E+  +G+ V+    +E+A +   N   L      Y   G       + P   AL +
Sbjct: 4   SVSEEITAIGDAVVRFIDREVAAIERDNHALLSSERQLYDASGR------YAPEVVALRK 57

Query: 109 R----SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           R    S   G +       F P           A + +  ++ A    S  +    ++  
Sbjct: 58  RVRMRSAELGFYNL-----FGPTELGGEGMGAVAAVEIQERVNAHVGPSRDLVQTVVLPS 112

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T  +          R+    +++ +      +  GL+E   G+D+  + ++  +  DG
Sbjct: 113 PFTNGLSPVLV--HLDRQVFERHRSALASGEKTMCFGLSEPDAGSDVFGMKTRAVRDGDG 170

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                  +W  ++P +D  ++ A       R     +     + S  G     +   +G+
Sbjct: 171 WVITGTKQWITNAPHADYAMIFAVTNEDLVRQRKGGITGFFIETSTRGFSVPSVIPTMGH 230

Query: 282 RSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + T  +            L               +  L  A   +   R +L +A+ Y
Sbjct: 231 LGSETGIISLDQVRVPDEQRLGAVDNGLSVAIGGVSVGRLAMAGSCIGLARWALRQAVDY 290

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +     ++  IA  A DI AA +++   A   D+    +++         
Sbjct: 291 AAIRKTGGRPIASHQAIQTMIARCATDIYAAKSMTRDCAWRIDQGLPATKQ-------VS 343

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K +  +M   V+ + ++  G  G   E  +   YR +    I  G+    +  +   +
Sbjct: 344 MVKMYATEMLNRVMDQCIQVHGAMGLSNELRLEAGYRWARLLRIPDGTTEIQLRTIARHV 403

Query: 459 EKG 461
             G
Sbjct: 404 LAG 406


>gi|161614232|ref|YP_001588197.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|204927659|ref|ZP_03218860.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|161363596|gb|ABX67364.1| hypothetical protein SPAB_01977 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|204323001|gb|EDZ08197.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322616741|gb|EFY13650.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619999|gb|EFY16872.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622310|gb|EFY19155.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627833|gb|EFY24623.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633068|gb|EFY29811.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636686|gb|EFY33389.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641289|gb|EFY37930.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647397|gb|EFY43889.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650219|gb|EFY46633.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655793|gb|EFY52095.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660119|gb|EFY56358.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665315|gb|EFY61503.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669572|gb|EFY65720.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673498|gb|EFY69600.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677425|gb|EFY73489.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679911|gb|EFY75950.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687383|gb|EFY83355.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192500|gb|EFZ77730.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198645|gb|EFZ83746.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204072|gb|EFZ89086.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208691|gb|EFZ93629.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210862|gb|EFZ95733.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217668|gb|EGA02383.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323227553|gb|EGA11712.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229470|gb|EGA13593.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232693|gb|EGA16789.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240269|gb|EGA24313.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242743|gb|EGA26764.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246564|gb|EGA30540.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252802|gb|EGA36639.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256708|gb|EGA40437.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260099|gb|EGA43724.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267136|gb|EGA50621.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271540|gb|EGA54961.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 383

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 138/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--REFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEISKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D +  G+  
Sbjct: 137 TTTWTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADREESLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|319953442|ref|YP_004164709.1| glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319422102|gb|ADV49211.1| Glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 392

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 133/351 (37%), Gaps = 40/351 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +     
Sbjct: 57  GLAEIGAFGPYIPQEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYAYGN 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ S E+                 GLTE   G++ + + ++ + + D    
Sbjct: 117 EAQRKKYLPKLASGEFMG-------------CFGLTEPNHGSNPSGMETKYKDMGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                W  +SP +D  ++ A+  EGR+   +V R +E     G       NK   R++AT
Sbjct: 164 NGAKLWISNSPFADIAVVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            EL F N         N+  G       L  LDSA   ++   +  A      A+ YA+ 
Sbjct: 219 GELIFDNVKVP---KENILLGKTGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    + ++ +A++  +I  A  ++ RL    +E K+ + + + A+       
Sbjct: 276 RIQFGKPIAATQLQQKKLAEMITEITKAQLMALRLGQLKNEGKATTAQISMAKR------ 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               +MA  +  EA + +G  G   E SI RH     +     G+ +  +L
Sbjct: 330 -NNVEMALKIAREARQVLGAMGISGEYSIMRHMMNLESVITYEGTHDIHLL 379


>gi|111019296|ref|YP_702268.1| glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818826|gb|ABG94110.1| probable glutaryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 390

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 118/360 (32%), Gaps = 33/360 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       G+     +      +   A+ +    L  +       +      +   + 
Sbjct: 52  RELAEGLGELGVLGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P+             M         GLTE   G++ A + +  ++  D
Sbjct: 112 HYGSEDQKQEWLPR-------------MAAGKAIGCFGLTEPDFGSNPAGMRTGAKRDGD 158

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  +  F+VP         G     +K+K+  R+
Sbjct: 159 DWILNGTKMWITNGSVADVAVVWARTDDGIRGFVVPT-----DTPGFSAPEIKHKMSLRA 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +        L  + G       L  L+ A   +        R  L  AI Y
Sbjct: 214 SVTSELVLEDVRLPESAMLPEAKGLS---GPLGCLNEARFGIIFGAMGAARDCLESAISY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R V    L    + +  IAD+AL++     L++ L    D   +R E+         
Sbjct: 271 AQDRQVFDKSLAAYQITQVKIADMALEVGKGHLLAYHLGRLKDRGVARPEQ-------VS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A A+  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 324 TGKLNNVREAIAIARECRTILGANGITLEYPVIRHANNLESVLTYEGTSEVHQLVIGKAL 383


>gi|311105335|ref|YP_003978188.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760024|gb|ADP15473.1| acyl-CoA dehydrogenase, N-terminal domain protein 6 [Achromobacter
           xylosoxidans A8]
          Length = 383

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 133/373 (35%), Gaps = 31/373 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYLMAQLEAG 149
              D     P            G     +   F               A  Y  AQ+ + 
Sbjct: 34  RELDDASEFP--FEAYEALARAGWMGLPYPAQFGGSGGSFKDLAIFIEAVAYHNAQMASA 91

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           +L +  V     V+   +  V     P+I S                 + L LTE   G+
Sbjct: 92  YLATV-VYGGMQVSHGASQEVKSRILPRIISG-------------KTRMALCLTEPEAGS 137

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPN 268
           D++AI ++  +  D  Y + G K F++       +++A + E   G   +   + D    
Sbjct: 138 DVSAIRTRAAQDGDD-YVIDGQKVFITCAHVAHQLVVATKTERDAGRHGITLFMVDADAP 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG- 327
           G+  + LK  +G R   T E+ F N        L V  G    +   + L+   +S +  
Sbjct: 197 GVTIRPLKA-LGRRMIHTNEVFFDNVRVPAAHMLGVPNGGWNGLMRGLNLERLCLSAAAS 255

Query: 328 --MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             ++  +  A  YA  R   G  +     +    +D+ +       L++R+A+  D    
Sbjct: 256 GNIQRIIDSAKEYADTRTQFGKPIGQYQAVAHKFSDMQIMAETTRVLTYRVADMLDAGLQ 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E A A+++A      C  M        ++ +GG+GY+ E  +  ++R++    I  G
Sbjct: 316 PTSETAIAKVVATENNCKCADMG-------IQIMGGAGYMMENEMQMYFRDARVGPIGGG 368

Query: 446 SGNAMVLDVLNLL 458
           +   M   +   +
Sbjct: 369 TSEIMRSIIAKQM 381


>gi|260868185|ref|YP_003234587.1| putative acyl-CoA dehydrogenase [Escherichia coli O111:H- str.
           11128]
 gi|257764541|dbj|BAI36036.1| predicted acyl-CoA dehydrogenase [Escherichia coli O111:H- str.
           11128]
 gi|323181012|gb|EFZ66550.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1180]
          Length = 383

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KVYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|85374972|ref|YP_459034.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
 gi|84788055|gb|ABC64237.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter
           litoralis HTCC2594]
          Length = 381

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 133/386 (34%), Gaps = 34/386 (8%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
           + N   P++  +G      ++    P      +     G   +     +  +       +
Sbjct: 20  LDNKLEPEIRRHG------ERFIPKPLMKEWTQALTGYGHITAPHQEQWGGLDMGWLTHL 73

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                   + L+       +   A ++       + + +   + + E             
Sbjct: 74  LIFEEIAYSSLDVAIPGFINAVGAELIRRFAPETIKQRYLADLVAAE------------- 120

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
             + LG++E   G+D+AAI ++  +  D         W  +   SD FI   +     G 
Sbjct: 121 KFVSLGISEPDVGSDVAAIKTRAVRDGDFWVINGEKTWITNGAYSDIFICTCKT----GE 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI 314
             V  +L D   +    + +  K+     +T ++  +     +   +  V  G    +++
Sbjct: 177 NEVTHILVDRDESEYEVRDI-QKMALNGQSTAQIFLTECRVPVANTIGRVGDGLRNTLQV 235

Query: 315 L--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A+ S+   R ++ EAI YAR R   G  +    ++   IA +A  I AA  L
Sbjct: 236 FEIARCHMAMWSIGIARRAMDEAIAYARDRAQHGKKIAGHQLIADKIAIMATKIDAARLL 295

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R  +         +    A     + K++  +MA     +A++  GG+G   E  + R
Sbjct: 296 THRAISLV-------QAGTRAETECSMAKWYATEMAIEATRDALQIHGGNGVTREFIVER 348

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
             RE+    I  G+     L V   L
Sbjct: 349 LVREAIICPIPDGTTEIQKLVVSRAL 374


>gi|90419436|ref|ZP_01227346.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336373|gb|EAS50114.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 407

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 120/323 (37%), Gaps = 40/323 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +         + + P++ + EY                 GLTE   G+D   +
Sbjct: 117 SSLVMYPIFAYGDEAQRRKYLPRLATGEY-------------VGCFGLTEPDAGSDPGGM 163

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +KI  G        W  +SP++D F++ A+         +   + D    GL   +
Sbjct: 164 TTRAEKIDGGYRLSGAKMWISNSPIADVFVVWAKSAAHDNK--IRGFILDKGMKGLSAPK 221

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+  R++ T E+           LL +++   GP         L+ A   +S   + 
Sbjct: 222 IEGKLSLRASITGEIVMDGVEVGEDALLPNVSGLGGP------FGCLNRARYGISWGAMG 275

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R   G  L    ++++ +AD+  +IA     S R+   FDE    
Sbjct: 276 AAEDCWKRARDYTMERTQFGRPLAQTQLVQKKLADMQTEIALGLQGSLRVGRLFDEG--- 332

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A A  M  + K   C  A  +   A +  GG+G + E  + RH +     +   G+
Sbjct: 333 ----AMAPEMISLIKRNNCGKALDIARTARDMHGGNGIMGEYHVMRHAQNLETVNTYEGT 388

Query: 447 GNAMVLDVLNLLEKGTNLFEQLF 469
            +   L    +L K     +  F
Sbjct: 389 HDVHAL----ILGKAQTGLQAFF 407


>gi|239817999|ref|YP_002946909.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804576|gb|ACS21643.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 397

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 132/377 (35%), Gaps = 21/377 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--A 148
            +  D+ +   A    +RR    G        S    + +   +        +      A
Sbjct: 36  AQEVDERDDRAACREWVRRLGDGGWLRYAVPGSAGGALERLDSRALVLLRETLGYHSPLA 95

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               +     +  + L  TP     +                + K        L+E   G
Sbjct: 96  DFAFAMQGLGSGAITLAGTPEQQSHYL-------------TAVGKGEKIAAFALSEPDAG 142

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+AA+  + +   DG        W  +  ++D + + A+ +   G   +   + D +  
Sbjct: 143 SDVAAMAMRAEATPDGWRLNGEKTWISNGGIADFYCLFAKTDPTGGTRGITVFIVDATTP 202

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE-DMKIL--IYLDSAIMSV 325
           GL      + +     AT  L F +        L    G  +  M+ L       A  ++
Sbjct: 203 GLDTSEHIDVMAPHPLAT--LRFQDCIVPRAAQLGELNGGFKLAMRTLDIFRASVAAAAL 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +LAEAI +A+ R + G  L D  + +  + ++A  I +A  L++R A   D+A+ 
Sbjct: 261 GMGRRALAEAIAHAKGRRMFGQTLADFQLTQAKLGEMAALIDSAALLTYRAAWMRDDAEQ 320

Query: 386 RSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           R   A       A + K    + A  VI  A++  GG G      I   YR+  +  I  
Sbjct: 321 RGAPAVGDVSAAAAMAKMCATENASRVIDMALQMHGGLGVKVGTKIESLYRDIRSLRIYE 380

Query: 445 GSGNAMVLDVLNLLEKG 461
           G+     L +   + +G
Sbjct: 381 GATEVQQLIIGKSVLRG 397


>gi|31791422|ref|NP_853915.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium bovis AF2122/97]
 gi|31617007|emb|CAD93114.1| PROBABLE ACYL-COA DEHYDROGENASE FADE5 [Mycobacterium bovis
           AF2122/97]
          Length = 611

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 95/522 (18%), Positives = 195/522 (37%), Gaps = 72/522 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
                 L  +        A+      + N P    + P       V    ++   +   +
Sbjct: 36  DTARDMLAEVSRLAEGPVAESFVE-GDRNPPV---FDPKTH---SVMLPESFKKSVNAML 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D +   +   +A  + A   +++    A  + +     A ++  + T    
Sbjct: 89  EAGWDKVGIDEALGGMPMPKA-VVWALHEHILGANPAVWMYAGGAGFAQILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 148 K-WAVLAAERGWGST-------------MVLTEPDAGSDVGAARTKAVQQADGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  + VP+ L      E G  NG+   
Sbjct: 194 KRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFDVETGEPGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALQYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKS---RSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A +      +A  A      M P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 374 TFQDAAVAEVVHGVDAKLAVRVNDLMLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVI 484
            ++ R++  +S+  G+      D      + +KG  L     Q+ + ++   G+   K  
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQAFVDSGAGNGRLKTE 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
             L        + +G+A  LT  +  A     +LY+ G+  +
Sbjct: 494 RAL--LAKALTDVQGMAAALTGYLMAAQQDVTSLYKVGLGSV 533


>gi|256397917|ref|YP_003119481.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256364143|gb|ACU77640.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 609

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 83/493 (16%), Positives = 177/493 (35%), Gaps = 71/493 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQL--HAYGPGGERWDKVEFHPAWHALLR 108
              +  E+E L    L+ +  +    ++ N P      +              ++    +
Sbjct: 38  AKSILAEVERLAVDELAPSLLD----SDRNPPIFNPETHSAT--------LPESFKRSYK 85

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           + +                   +  +   A L L A      + S     A++V  + T 
Sbjct: 86  QFMDAEWWRLGLPTELGGTPTPRTLRWSVAELVLGANPAIW-MYSSGADFATVVWNLGTE 144

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              K                  M        + LTE   G+D+ A  ++  + +DG + +
Sbjct: 145 EQRK--------------VARQMVDGQWGSTMVLTEPDAGSDVGAGRTKAVQQADGSWHI 190

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLC 271
            G K F++S   D       ++LA+ EG       +  F+VP+   D      G  NG  
Sbjct: 191 DGVKRFITSGEHDLSENIIHLVLARPEGAGPGTKGLSLFIVPKYDFDWETGELGERNGAY 250

Query: 272 YQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              +++K+G +++ T E+ F        G+LLG+++     +  +     +     ++S 
Sbjct: 251 VTNVEHKMGLKASTTCEVTFGQNGVPAKGWLLGEVHDGIAQMFTIIEFARMMVGTKAIST 310

Query: 328 MRVSLAEAIHYARRRHVS------GG-----ILIDQPVMKRAIADIALDIAAATALSFRL 376
           +      A+ YA++R         G       +   P ++R++      +    +L    
Sbjct: 311 LSTGYLNALEYAKQRVQGSDLTVPGKDAPRVTITHHPDVRRSLMTQKAYVEGMRSLVLYT 370

Query: 377 ANSFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
           A   D                    ++ PI K +  + +   +A+A++  GGSG+++E  
Sbjct: 371 ATHQDAIEQARAAGTEDKHAERMNDLLLPIVKGYGSEKSYEQLAQALQIFGGSGFLQEYP 430

Query: 430 IARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL-GSSGKKVITI 486
           + ++ R++  +S+  G+     LD+    +++ G      L   +   L G+ G   +  
Sbjct: 431 LEQYIRDAKIDSLYEGTTAIQSLDLFFRKIVKDGGVALTTLNDEIAAFLAGNPGGAELAR 490

Query: 487 LRDSISLCKEDKG 499
            R  +S  + + G
Sbjct: 491 ERQLLSTAQAEVG 503


>gi|153009500|ref|YP_001370715.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561388|gb|ABS14886.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 394

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 72/370 (19%), Positives = 129/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 53  ELFRLMGQAGLLGVTLPEEYGAANAGYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D A + ++ +KI  
Sbjct: 113 AYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGMKTRAEKIDG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+         +   + +    GL   ++  K+  R+
Sbjct: 160 GYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPKIGGKLSLRA 217

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+           LL +++   GP         L+ A   +S   +  AE     A
Sbjct: 218 SITGEIVMDGVEVSEDALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCWFRA 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R      L    + ++ +AD+  +IA     S R+   FD+ +        A  
Sbjct: 272 RQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDDGR-------MAPE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 325 MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|159044900|ref|YP_001533694.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
 gi|157912660|gb|ABV94093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
          Length = 406

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 127/361 (35%), Gaps = 34/361 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL       ++  +     A+ + A  +  +       +   S      +    T   
Sbjct: 72  AAGLLGITVPEAYGGLGGSYVAYGLVAREIERIDSGYRSMMSVQSSLVMYPIHAYGTEEQ 131

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P +                ++    GLTE   G+D A + ++ +K   G      
Sbjct: 132 RQKYLPGL-------------AAGTLIGCFGLTEPDAGSDPAGMKTRAEKTPTGYRLTGS 178

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+ E   G   +   + D    GL   ++  K+  R++ T E+ 
Sbjct: 179 KMWISNSPIADVFVVWAKSEAHGGK--IRGFVLDKGTPGLSAPKVGGKLSLRASVTGEIV 236

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHV 344
                       +     VE +K     L+ A   +    +  +E   +A R     RH 
Sbjct: 237 MDGVEV----GEDALLPGVEGLKGPFGCLNRARYGIGWGVMGASEFCWHAARQYGLDRHQ 292

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L    + ++ +AD+  +IA     + R+    DE ++       A  M  + K   
Sbjct: 293 FKRPLAQTQLFQKKLADMQTEIALGLQAALRVGRLMDEGRA-------APEMISLLKRNN 345

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +   A +  GG+G  EE  + RH       +   G+ +   L +L   + G   
Sbjct: 346 CGKALEIARAARDMHGGNGISEEFQVMRHMVNLETVNTYEGTHDVHAL-ILGRAQTGLQA 404

Query: 465 F 465
           F
Sbjct: 405 F 405


>gi|309781996|ref|ZP_07676726.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308919062|gb|EFP64729.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 622

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 90/510 (17%), Positives = 177/510 (34%), Gaps = 84/510 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P   A L      GL  +  D     +      +      +  A +        +
Sbjct: 71  KVHIIPEVKAALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           + +A+++    TP                 T   P  +      + L+E + G+ ++ I 
Sbjct: 131 IGNANLLLAHGTPTQ-------------IETFVQPEMEGRFYGTMCLSEPQAGSSLSDIV 177

Query: 216 SQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCF 256
           ++ +          Y L+G+K ++S+   +       ++LA++ G           +  F
Sbjct: 178 TRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLF 237

Query: 257 LVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTF 295
           +VP+ L +     G  N +    L +K+G R      L F                    
Sbjct: 238 IVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRAGAI 297

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G+ +     +  M     +   + +          A+ YAR R   G         
Sbjct: 298 GYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHAVDYARNRPQ-GRPVGPSGKD 356

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RI 395
                  ++D   ++R +      +  A  L+   A   DE +  ++ A  A       I
Sbjct: 357 AASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDAAKRAKLGLLLDI 416

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L
Sbjct: 417 LTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLL 476

Query: 456 N--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL--------RDSISLCKEDKGLARFLT 505
              ++ +    F  L   ++  +G + +     L          +  L K  + L     
Sbjct: 477 GRKVVMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGD 536

Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFL 535
            ++ LA+++  L   G   +A ++LE    
Sbjct: 537 PRVTLANASVYLEAFGHVVVAWIWLEQALA 566


>gi|198244805|ref|YP_002215769.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197939321|gb|ACH76654.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326623516|gb|EGE29861.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 383

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 138/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 33  DQTGTYP--KEFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEISKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D  + 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNNSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D +  G+  
Sbjct: 137 TTTWTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDTEPKDPKKAFTLWWVDSNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDRVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKIAWQADREESLRTS 314

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 315 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYVAGRQILK 378


>gi|114761136|ref|ZP_01441051.1| putative acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114545384|gb|EAU48386.1| putative acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 379

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 125/389 (32%), Gaps = 29/389 (7%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-H 133
              +    +       G R D+    P  + LL      G        +   +       
Sbjct: 13  DTVDRFMARHMPSEEAGRR-DEAHTPP--YDLLPHLGEAGFLGLPVPEAHGGLGLDWTTM 69

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +   RL   A      +       A  V    +        P+I S             
Sbjct: 70  ALVQERLAWHAYAVGSIVNRVVGFGAMSVLSYGSEAQKARLLPRITSGRC---------- 119

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
               I L LTE + G+D  AI ++ ++  DG     G  W   +  +D  +  A+ +   
Sbjct: 120 ---LIALALTEPQAGSDAGAIRTRAERSGDGWVLTGGKTWISDAGGADYLLTAARTDPDS 176

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309
            G   V   L      G+   ++  K+GN    + E+           L+G+       +
Sbjct: 177 RGSRGVSMFLVPRDAPGIAMTQIP-KVGNNCMPSWEIGLDGVQVGAEALMGEEGKGFSGL 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                      A   +   + +L   I +A+ R   G  +     ++  IAD+ + + A 
Sbjct: 236 MSTLHYSRASMAATVLGCAQAALDLTIAHAKERKQFGRPIGSFQTIRHRIADMQMRVDAT 295

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             +   LA    E +  S  A+ A++ A     +       V    M+ +  +GY  E +
Sbjct: 296 RLVVRHLAWMIAEGRDSSRFASQAKVQATECLQF-------VTDHGMQILASAGYARESA 348

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           + R++R++   S   GS       +   L
Sbjct: 349 MQRYWRDARLYSFGEGSNEIQRDLIARQL 377


>gi|62858803|ref|NP_001016289.1| glutaryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89266838|emb|CAJ83975.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
 gi|89268079|emb|CAJ82579.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis]
          Length = 440

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +A   +    + + P++ S E+                 GLTE   G+D A +
Sbjct: 147 SSLVMHPIAAYGSEEQKQKYLPRLASGEW-------------LGCFGLTEPNHGSDPAGM 193

Query: 215 TSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    S          W  +SP++D  ++ A  E       V   L +    GL  
Sbjct: 194 ETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGK----VRGFLIERGTKGLST 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++AT  +   +     + + N+             L++A   +S   +  
Sbjct: 250 PKIEGKFSLRASATGMILLEDV---EIPEENLLPNVSGLGGPFGCLNNARYGISWGALGA 306

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R   G  L    ++++ +AD+  DI        RL    DE K+  
Sbjct: 307 AEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLTDITIGLQACLRLGRLKDEEKATP 366

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  I RH     + +   G+ 
Sbjct: 367 E-------MISMLKRNSCGKALDIARQARDMLGGNGISDEYHIIRHVMNLESVNTYEGTH 419

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 420 DVHALILGRAI 430


>gi|218296834|ref|ZP_03497529.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218242714|gb|EED09249.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 372

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 143/374 (38%), Gaps = 31/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   R D+    P    L    +  GL   +    +             A     A    
Sbjct: 21  PEAARLDREARFP--WELFWEGVALGLPVLVVPEVYGSAGLGPKALAVVAEELAYA---- 74

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                P V +A ++  +    +       + S         P  K  VA    LTE   G
Sbjct: 75  ----CPGVAAALLLNNLVADAL-------LLSESRYAQAFLPRLKEEVA-SYALTEPHAG 122

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+AAI ++ +K   G        W   +P +  F++ A+V    G   +   L +    
Sbjct: 123 SDVAAIRTRAEKAPGGFRLFGRKAWISHAPEASFFVVFAKV--AEGREGIAAFLVERK-E 179

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVS 326
           G+       K+G +++   E+            +    G    M++        A M+V 
Sbjct: 180 GMEVGPPLPKMGQKASPAAEVPLEGVLVPEEALIARE-GFRLAMRVFDRSRPMVAAMAVG 238

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +R +L EA+ YAR R   G  L +   +   +A++A+D+ AA  L+ R A+  +  ++ 
Sbjct: 239 LLRRALDEALAYARVREAFGKPLWEHQGVGFKLAEMAMDLEAARLLTHRAADLAERGEAN 298

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S EAA A+  A              ++EA++  GG+GY E+  +A+ YR++    I  G+
Sbjct: 299 SMEAAMAKAFAADAA-------VRGVSEALQVFGGNGYSEDCPMAKLYRDAKVLQIYEGT 351

Query: 447 GNAMVLDVLNLLEK 460
                + VL  L +
Sbjct: 352 SEIQRVIVLRELLR 365


>gi|330823115|ref|YP_004386418.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308487|gb|AEB82902.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 416

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 141/395 (35%), Gaps = 43/395 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R+    G         +  +                  +    L++ +      +  
Sbjct: 49  ELRRKMADMGYFGITIPEEYGGMGLGTFEYCLICEQLARGWMSVASLVARA--QGGFIKN 106

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + + + P++   E+                  L+E   G+D+A+I+ + + + D 
Sbjct: 107 EMPEEMRRKYLPRVVRGEF-------------LNASALSEPDTGSDLASISCRAELVGDE 153

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS----PNGLCYQRLK 276
                   W   +  +D   + A+       +     +   L +      P G+   +  
Sbjct: 154 WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWEGISCFLIEKKRGEFPPGM-VGQPI 212

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRV 330
            KIG     T EL  ++         N+   P +   I+          +A  ++   + 
Sbjct: 213 PKIGYFGWKTFELALNDLRVP---RENLIGAPGQAFLIMAKGLETARAHTAARAIGLAQG 269

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +AI YAR R   G  + +   ++  IA +A ++ AA  L   + ++ D  +    EA
Sbjct: 270 ALEDAIAYARERKQFGMPIAEYQAIRFKIATMATEVEAARQLLHYVCSAIDSGRRCDTEA 329

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +         K +  +MA  V +EA++  GG+GY +  ++ RH+R++    I  G+    
Sbjct: 330 SM-------VKLFATEMAERVTSEALQIFGGAGYTKLFAVERHWRDARLTKIFEGTSEIQ 382

Query: 451 VLDVLNLLEKGTNLFEQLFS--TLEQDLGSSGKKV 483
              + N L  G ++ E + +    E   G+  +  
Sbjct: 383 QRIIANNLL-GKSVLEDMIASRAFESAAGARTEAA 416


>gi|126725007|ref|ZP_01740850.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126706171|gb|EBA05261.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 386

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CEGEQIERYLLPAVQGKRMDALAMTEPGAGSDVRGMKCNAVRDG-GDWVINGTKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+          R     +   L D    G   +     + +R    + LEF++
Sbjct: 160 DHADFIIVFIATGEDQTPRGPKKRITAFLVDRGTPGFTIRDGYKSVSHRGYNNMILEFND 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A M+V   R      ++YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFAVMNEWLYATRITVATMAVGRARRCFDMGLNYAAEREQFGQAIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 KFQGVSFQLADMITEIDAADYLTLASAWRLDQGLP-------ANREIASAKVYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 333 VTDATLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRELLR 382


>gi|119961544|ref|YP_947297.1| Acyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119948403|gb|ABM07314.1| putative Acyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 387

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 76/407 (18%), Positives = 148/407 (36%), Gaps = 37/407 (9%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           + L+   Q+L+        ++ A  P   + D+    P  + ++++    GL    +   
Sbjct: 4   FDLNEEYQDLSDSVREFADEVVA--PVSAKHDEEHSFP--YEVVKQMGEMGLFGLPFPEE 59

Query: 124 FEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           F  +         A   L  + Q  A  L +     A  V    T    ++W P++ S  
Sbjct: 60  FGGMGGDYFALALALEQLGRVDQSVAITLEAGVSLGAMPVFRFGTEEQKQEWLPQLASG- 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                           G GLTE+  G+D     +    + +G + ++G+K F+++  +D 
Sbjct: 119 ------------RSLAGFGLTEREAGSDAGGTKTNAH-VENGEWVINGNKEFITNSGTDI 165

Query: 243 FIMLAQVE--------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
             ++                   +  +L      G   ++  NK+G  ++ T  L   N 
Sbjct: 166 TTLVTVTAVTGKKENADGSTKKEISTILVPTDTPGFTAEKPYNKVGWNASDTHPLTLDNV 225

Query: 295 FGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                  L     G    + IL    +  A ++    +  +  ++ YA+ R   G  +  
Sbjct: 226 RVPEANLLGERGRGYANFLSILDEGRIAIAALATGAAQGCVDLSVKYAKERSAFGQNIGK 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  IA +      A    +  A+     K    EAA A+++A        + A   
Sbjct: 286 YQAIQFKIARMQARAHTARLAYYDAASRMLAGKPFKTEAAIAKMVAG-------EAAMDN 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A +  GG G+I E ++ARHYR+S    I  G+    ++ +   L
Sbjct: 339 ARDATQVFGGYGFINEFTVARHYRDSKILEIGEGTTEVQLMLIAREL 385


>gi|78065944|ref|YP_368713.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77966689|gb|ABB08069.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 609

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/559 (17%), Positives = 191/559 (34%), Gaps = 90/559 (16%)

Query: 40  DSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           D+  +A +  +     +  + +    E +        A   +   PQ       GER   
Sbjct: 19  DAEALAALPRYTEHSRETFDAVLDTSERIAEDLFAPHAARGDREEPQF-----DGERVTL 73

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +   P     +R     GL  +  D +   +   +  +  +   +  A +        +V
Sbjct: 74  I---PDVEPAVRAFADAGLIAAGHDEALGGMRLPKLVEAASFLFFQAANIATAAYPFLTV 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    +P     +A              P  +      + L+E + G+ ++ I +
Sbjct: 131 ANANLLVAHGSPAQIDAFA-------------RPELEGRYLGTMCLSEPQAGSSLSDIAT 177

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----------CFL 257
           +     D      Y L+G+K ++S    +       ++LA++    G           F+
Sbjct: 178 RADFEGDSPLGPRYRLTGNKMWISGGEHELTENIIHLVLAKIPDEHGRLLPGTRGISLFI 237

Query: 258 VPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGFLLG 300
           VP+ L        G  N +    L +K+G R      L F               G+L+G
Sbjct: 238 VPKYLPGADGAAQGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRYRPEGRAGAIGYLVG 297

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------------GG 347
             N     +  M     +     +V+        A+ YAR R                  
Sbjct: 298 QANHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKDAAAPQA 357

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITK 401
            +++ P ++R +      +    AL    A   DEA++  +    A       I+ PITK
Sbjct: 358 PIVEHPDVRRMLLAQKSYVEGGLALILYCAKLVDEARAHDDADVRAHATRLLDILTPITK 417

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459
            W  +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L   + +
Sbjct: 418 SWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLGRKVAQ 477

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA--------LA 511
               L   L + +   +    + +   LR+              +T ++         LA
Sbjct: 478 DDGALLHALDARIGATV-ERARALDAGLREQADALAPRWARLVEVTRQLGTIGDPQARLA 536

Query: 512 SSAAALYRAGMNDIADVFL 530
           +++  L   G   +A ++L
Sbjct: 537 NASVYLEAFGHLVVAWLWL 555


>gi|146277588|ref|YP_001167747.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555829|gb|ABP70442.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 390

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 141/376 (37%), Gaps = 28/376 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P    +   +   GL        F  +   +     A           
Sbjct: 26  PRAAEIDRTNAIPT--PIFDTARELGLFGLSIPEEFGGLGECELASCVALETLSRGPGGV 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++P+  +A  +    TP+   D+               P+ +        LTE+  G
Sbjct: 84  TFYVAPNAPAA-AIRHAGTPKQKADYLE-------------PLAEGRKFAAFCLTEEGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSP 267
           +D A I ++  K  D         W   +  ++ F++ A  +  R     +   L  G  
Sbjct: 130 SDAAGIRTRAVKRGDTWVINGTKMWVSRAADAEVFLVSAVTDPERKPKPGITIFLI-GRR 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL       ++G R + + E+ F +       +LG+L+   G ++ +     L +A  +
Sbjct: 189 PGLSTGAPDVQMGGRGSGSAEVRFEDVEAGEDEILGELHDGFGGLKFVLGRARLWAAARA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  +  +   +I ++R R   G  + +  ++K  IA++  D+ AA    ++ A+ FD+  
Sbjct: 249 VGVIGKAAELSIDHSRTRRQFGQPIGEFQMVKEKIANMVADLYAARLQLYQAASLFDQGI 308

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++EAAYA       K +  + A       ++  G  G     +  R YR+  +  IL 
Sbjct: 309 DAAQEAAYA-------KLFASEAAGRATDACVQIHGAMGVAVGFAAERLYRDCRSYRILD 361

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ +   L + + ++K
Sbjct: 362 GTSDIQRLMIASRVQK 377


>gi|237731297|ref|ZP_04561778.1| acyl-coA dehydrogenase [Citrobacter sp. 30_2]
 gi|226906836|gb|EEH92754.1| acyl-coA dehydrogenase [Citrobacter sp. 30_2]
          Length = 401

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 139/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     +R    +G+        F  +     +  +   L  +++  A   +  
Sbjct: 51  DQTATYP--KEFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLIT 106

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ M+    A  L LTE   G+D  + 
Sbjct: 107 NGQCIHSMRRFGSAEQLR------------KTAESTMETGDPAYALALTEPGAGSDNNSA 154

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           T+   +  +G   L+G K F++      + ++LA+  E +           D    G+  
Sbjct: 155 TTSYTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSKKPGIKV 213

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   +        +     G +  M    +  L +A  S     
Sbjct: 214 NPL-HKIGWHMLSTCEVYLDDVEVDESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAE 272

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    
Sbjct: 273 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQEQSLRTS 332

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   
Sbjct: 333 AALA-------KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 385

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 386 MIYVAGRQILK 396


>gi|222106869|ref|YP_002547660.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4]
 gi|221738048|gb|ACM38944.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4]
          Length = 391

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 121/361 (33%), Gaps = 34/361 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRV 170
             GL        +             AR           +MS  S      +    +   
Sbjct: 57  KAGLLGVTLPEKYGAAGANYVSYGLVAREVERVDSGFRSMMSVQSSLVIHPIFAYGSEEQ 116

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P + S E             +    GLTE   G+D   + ++ +KI  G      
Sbjct: 117 KDKYLPGLVSGE-------------LIGCFGLTEPDAGSDPGGMKTRAEKIEGGYRLRGS 163

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  ++P++D F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+ 
Sbjct: 164 KMWISNAPIADVFVVWAKSEAHDGA--IRGFVLEKGMKGLSAPKIGGKLSLRASITGEIV 221

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHV 344
                       +     V  +K     L+ A   +S   +  AE        Y   RH 
Sbjct: 222 MDGVEV----GEDALLPGVSGLKGPFGCLNRARYGISWGVMGAAEDCWVRSRQYGLDRHQ 277

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    + ++ +AD+  +IA     S R+    DE K        A  M  + K   
Sbjct: 278 FGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHKH-------APEMISLIKRNN 330

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +L   + G   
Sbjct: 331 CGKALDIARMARDMHGGNGIQIEYHVMRHSQNLETVNTYEGTHDVHAL-ILGRAQTGIQA 389

Query: 465 F 465
           F
Sbjct: 390 F 390


>gi|327188504|gb|EGE55717.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512]
          Length = 391

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 72/370 (19%), Positives = 127/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 50  ELFRLMGQTGLLGVTLPEEYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVIYPIF 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D   + ++ +KI  
Sbjct: 110 SYGSDEQKKKFLPGLVSGE-------------LIGCFGLTEPDAGSDPGGMKTRAEKIEG 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E       +   + +    GL   ++  K+  R+
Sbjct: 157 GYRLRGSKMWISNSPIADVFVVWAKSEAH--NNEIRGFVLEKGMKGLSAPKICGKLSLRA 214

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+           LL  ++   GP         L+ A   +S   +  AE     A
Sbjct: 215 SITGEIVMDGVEVTEDALLPGVSGLKGP------FGCLNRARYGISWGVMGAAEDCWFRA 268

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    + ++ +AD+  +I      S R+    DE K        A  
Sbjct: 269 RQYGLDRKQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDEHK-------MAPE 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 322 MVSLVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 380

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 381 GRAQTGLQAF 390


>gi|307138354|ref|ZP_07497710.1| putative acyl-CoA dehydrogenase [Escherichia coli H736]
 gi|315618891|gb|EFU99474.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           3431]
          Length = 383

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|326384997|ref|ZP_08206670.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196288|gb|EGD53489.1| glutaryl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 395

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 114/375 (30%), Gaps = 31/375 (8%)

Query: 95  DKVEFH-PAWHALLRRSIHD------GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           D++  H   W    R    +      GL                A     A L L A   
Sbjct: 34  DRIRPHIAGWFDEARIPAKELAKELGGLGVLGMHLDGYGCAGMSAVTYGLACLELEAIDS 93

Query: 148 AG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +      +   +    +    ++W P+             M         GLTE 
Sbjct: 94  GIRSLVSVQGSLAMFAIHHWGSEEQKQEWLPR-------------MAAGDALGCFGLTEP 140

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D   + ++  +            W  +  ++D  ++ A+ +   G   +   +   
Sbjct: 141 DFGSDPGGMRTRAVRDGSDWVLNGAKMWITNGSVADVAVVWAKTDLEQGARGIRGFVVPT 200

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIM 323
              G     ++ K+  R++ T EL   +        L  + G    +  L          
Sbjct: 201 DTPGFSAPEIRAKMSLRASVTSELVLQDVRLPESAMLPKAAGLSGPLSCLNEARFGIIFG 260

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R  L  A+ YA  R V    L    + +  +AD+AL++     L++RL    D  
Sbjct: 261 SIGAARDCLETAVDYASTRMVFDKPLAAYQLTQAKLADMALEVGKGHLLAYRLGRLKDAG 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    +         + K   C+ A  V  E    +  +G   E  + RH     +    
Sbjct: 321 EVEPAQ-------VSLGKLNNCREAIKVARECRTILAANGITLEYPVIRHANNLESVLTY 373

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   L
Sbjct: 374 EGTSEVHQLTIGRAL 388


>gi|300994846|ref|ZP_07180959.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           45-1]
 gi|300406186|gb|EFJ89724.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           45-1]
          Length = 384

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGALAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|260460954|ref|ZP_05809203.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032988|gb|EEW34250.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 387

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 128/386 (33%), Gaps = 33/386 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   +        +  ++I  GL+ +                +   +   
Sbjct: 23  ELYPHEREVERTGVLR-RELIEEIKAKAIEAGLYAANMPADVGGAGLDTVTWLLYEKELG 81

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A           V   S + L  TP   + +               P  +      L +
Sbjct: 82  RANYALHWTC---VARPSNILLAGTPEQREKYL-------------FPCIRGEKWDCLAM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFL 257
           TE   G+D+  + +   +  D  + L+G K F+S    +D  I           R     
Sbjct: 126 TEPGAGSDLRGMKATAVQDGDD-WVLNGTKHFISHADLADFAICFMASGEEETARGKRKK 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +     D    G   +     + +R      LEF +       +LG+++           
Sbjct: 185 ITAFFVDKGTKGFTVRDGYRNVSHRGYTNAILEFDDCRLPASQVLGEVHKGFDVANSWLG 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L      +     +L  AI Y+ +R   G  +     +   +AD+A ++ AA  + F
Sbjct: 245 ATRLQVGATCLGRAERALGHAIEYSAQRQQFGQQIGKFQGVSFKLADMATELKAADLMVF 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                +D+     ++ A A++ A        +M   V  EA++  GG G +++  + R +
Sbjct: 305 EAGWKYDQGTVTDQDMAMAKLKA-------TEMLAFVADEAIQIHGGMGLMDDLPLERIW 357

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R++    I  G+       +   L +
Sbjct: 358 RDARVERIWEGTSEIQRHIISRALLR 383


>gi|114647351|ref|XP_001162899.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
           isoform 1 [Pan troglodytes]
          Length = 366

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 119/373 (31%), Gaps = 66/373 (17%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPGN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  ++  + A ++ A  +  +    +   L     
Sbjct: 160 GSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL   + ++K+G R ++T  L F +          +   P    KI +           
Sbjct: 220 PGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAM----------- 265

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                                          +AD+AL + +A  L++R A   D  K   
Sbjct: 266 -----------------------------FKLADMALALESARLLTWRAAMLKDNKKPFI 296

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++    I  G+ 
Sbjct: 297 KEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTS 349

Query: 448 NAMVLDVLNLLEK 460
               L +   L +
Sbjct: 350 EIQRLVIAGHLLR 362


>gi|212540746|ref|XP_002150528.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210067827|gb|EEA21919.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 541

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 148/412 (35%), Gaps = 27/412 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L    +E     +   P +  +  G +  D +     +  +  R    GL    +   +
Sbjct: 142 ALRAEVREWVE--SEIEPYVTEWDEGKKVPDSI-----YKQMGERGYLAGLLGVHFPAEY 194

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSRE 182
                K          + +   +            +++       P + K     +  R 
Sbjct: 195 TQARVKSVPPEMWDHFHELIVTDELSRTGSGGLVWNLIGGFGIGCPPLVKFGKKPLLDR- 253

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD 241
                   +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +  
Sbjct: 254 ----ILPGILAGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWA 309

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
            +  +A   G  G   +  LL +    G+  +R+ +  G  S+ T  + F +T    G L
Sbjct: 310 DYFTVAVRTGGEGMNGISVLLVERENGGVSTRRM-DCQGVWSSGTTYITFEDTKVPVGNL 368

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G  N     +        +   I S+   RV   E++ YA +R   G  LID PV++  
Sbjct: 369 IGKENQGFKVIMTNFNHERIGIIIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMK 428

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAM 416
           +AD+A  I AA      +     +A+S  +  A  ++   I        K       EA 
Sbjct: 429 LADMARQIEAAYNWLENV---VYQAQSMEDTEAMLKMGGAIAGLKAQSTKTFEFCAREAS 485

Query: 417 ECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  GG  Y        I R YR+  A +I  GS   M+   +    +   +F
Sbjct: 486 QIFGGLSYSRGGQGGKIERLYRDVRAYAIPGGSEEIMLDLSIRQSMRVHKMF 537


>gi|148225687|ref|NP_001086623.1| glutaryl-CoA dehydrogenase [Xenopus laevis]
 gi|50603795|gb|AAH77194.1| Gcdh-prov protein [Xenopus laevis]
          Length = 440

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 130/363 (35%), Gaps = 36/363 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+  S             A+ + A  +  +       +   S      +A
Sbjct: 96  REIISEMGELGVLGSTIKGYGCAGTSYVAYGLLAREVERVDSSYRSVMSVQSSLVMHPIA 155

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              +    + + P++ S E             +    GLTE   G+D A + ++ +    
Sbjct: 156 AYGSEEQKEKYLPRLASGE-------------LLGCFGLTEPNHGSDPAGMETRARYNPS 202

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           S          W  +SP++D  ++ A   +GRV  FL+ R        GL   ++K K  
Sbjct: 203 SKTYTLNGSKTWITNSPIADLCVVWAVCEDGRVRGFLIER-----GTKGLSTPKIKGKFS 257

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++AT  +   +     + + N+             L++A   +S   +  AE     A
Sbjct: 258 LRASATGMILMEDV---EIPEENLLPKISGMGGPFGCLNNARYGISWGALGAAEFCFHTA 314

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    ++++ +AD+  DI        RL    DE ++       A  
Sbjct: 315 RQYTLDRIQFGVPLARNQLIQKKLADMLTDITIGLQACLRLGRLKDEKRA-------APE 367

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +  +A + +GG+G  +E  I RH     A +   G+ +   L + 
Sbjct: 368 MISMLKRNSCGKALDIARQARDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDVHALILG 427

Query: 456 NLL 458
             +
Sbjct: 428 RAI 430


>gi|242800822|ref|XP_002483661.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218717006|gb|EED16427.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 547

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 141/381 (37%), Gaps = 22/381 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +   +     K     +    + +   
Sbjct: 163 PYVTEWDEGKKVPDSLYKQMGERGYLGGLLGVHFPAEYTKYRVKSVPPEKWDHFHELIVT 222

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P + K     +  R         +      I L +TE
Sbjct: 223 DELSRAASGGLVWNLIGGFGIGCPPLVKFGKKPLLDR-----ILPGILAGDKRICLAITE 277

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +T + +   DG  Y ++G K ++++ +   +  +A   G  G   +  LL 
Sbjct: 278 PDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTVAVRTGGEGMNGISVLLV 337

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +T      L+G  N     +        +  
Sbjct: 338 ERENGGVSTRRM-DCQGVWSSGTTYITFEDTKVPVENLIGKENQGFKVIMTNFNHERIGI 396

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I S+   RV   E++ YA +R   G  LID PV++  +AD+A  I AA      +    
Sbjct: 397 VIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMKLADMARQIEAAYNWLENV---V 453

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            +A+S  E  A  ++   I        K       EA +  GG  Y        I R YR
Sbjct: 454 YQAQSMEETEAMLKMGGAIAGLKAQSTKTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 513

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +  A +I  GS   M+   + 
Sbjct: 514 DVRAYAIPGGSEEIMLDLSMR 534


>gi|213964936|ref|ZP_03393135.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
 gi|213952472|gb|EEB63855.1| acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46]
          Length = 389

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 31/379 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
            P     D+    P  + ++ +    GL    +      +     +  I    L  + Q 
Sbjct: 32  DPVSAEHDRNHTFP--YEIVSQMGEMGLFGLPFPEEVGGMGGDYLSFGIALEELAKIDQS 89

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A  L +     A  +      +  + + P++ +                  G GLTE  
Sbjct: 90  VAITLEAGVGLGAMPIFHFGNEKQKETYLPELTAG-------------KKLAGFGLTEPD 136

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQV-EGRVGCFLVPRLL 262
            G+D  A  +  ++  D    ++G K F+++  +D      + A   +   G   +  ++
Sbjct: 137 AGSDAGATRTTAREDGDDF-IINGAKQFITNSGTDITSLVTVTAVTGQKEDGKKEISTII 195

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLD 319
                 G   +   +K+G  ++ T  L F++        L     G    + IL    + 
Sbjct: 196 VPSGTEGFVAEPAYDKVGWNASDTHPLTFTDVRVPQENLLGTRGRGFANFLSILAEGRVA 255

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A ++    +  + E++ +A+ RH  G  + +   +   IA +     AA    +  A  
Sbjct: 256 IAALATGAAQGCVDESVRHAKERHSMGRAIGEYQAVSFKIARMEARAHAARMAWYDAAAK 315

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                    EA  A+++A        + A     +A +  GG G++ E  +ARHYR+S  
Sbjct: 316 MAAGADFRREAYIAKMIA-------SEAAMDNARDATQIFGGYGFMNEYRVARHYRDSKI 368

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    ++ +   L
Sbjct: 369 LEIGEGTTEVQLMLIARGL 387


>gi|56475808|ref|YP_157397.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56311851|emb|CAI06496.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 392

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 112/312 (35%), Gaps = 25/312 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A          +  + L  T    +D+ P++ S                     L+E   
Sbjct: 91  ADFAFGMQGLGSGAITLHGTDAQKRDYLPRVASG-------------RAIAAFALSEPGS 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 138 GSDVAAMACSARQDGDEYVIDGEKTWISNGGIADFYVVFARTGEAAGSRGLSAFIVDADR 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F          L V   G    M+ L       A  +
Sbjct: 198 PGLEIAERIDVIAPH--PLARLRFRECRVPKSCLLGVPGQGFKVAMQTLDIFRTSVAAAA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+  A  R + G  L D  + +  +A +A  +  +  L++R A   D+ +
Sbjct: 256 LGFARRALDEALKRATTRDMFGQKLADFQITQAKLAQMATAVDTSALLTYRAAWLRDQGQ 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + +  AA A++          + A  VI  A++  GG G + +  + R YRE  +  I  
Sbjct: 316 TITGAAAMAKMT-------STETAQQVIDAAVQMWGGCGVVSDHPVERLYREIRSLRIYE 368

Query: 445 GSGNAMVLDVLN 456
           G+     L +  
Sbjct: 369 GATEVQQLIIAR 380


>gi|81245349|gb|ABB66057.1| putative oxidoreductase [Shigella boydii Sb227]
          Length = 401

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|149914858|ref|ZP_01903387.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b]
 gi|149811046|gb|EDM70883.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b]
          Length = 407

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 142/410 (34%), Gaps = 45/410 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++S +A+  A+        + AY          E  P     +      GL  +    
Sbjct: 35  ERMISQSARTFAQEV-LQPRVIRAYA-------NEETDPGIFREMG---QMGLLGTTIPE 83

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +     A+ + A  +  +       +   S      +    +      + P + S 
Sbjct: 84  EYGGLSAGYVAYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEDQRLKYLPGLASG 143

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +    GLTE   G+D A + ++ +K + G        W  ++P++D
Sbjct: 144 E-------------LIGCFGLTEPDAGSDPAGMKTRAEKTATGYRLTGSKMWISNAPIAD 190

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ E   G   +   + D    GL   ++  K   R++ T E+            
Sbjct: 191 VFVVWAKSEAHDGK--IKGFILDKGAKGLSAPKITGKQSLRASVTGEIVMDGVEV----G 244

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
            +     VE +K     L+ A   ++   +  AE   +A R     RH     L    + 
Sbjct: 245 EDALLPNVEGLKGPFGCLNRARYGIAWGVMGSAEFCWHAARQYGLDRHQFRRPLAQTQLF 304

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  ++      + R+    D       EA+ A  M  + K   C  A  +   A
Sbjct: 305 QKKLADMQTEVTLGLQAALRVGRLMD-------EASAAPEMISLIKRNNCGKALDIARMA 357

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 358 RDMHGGNGISEEYQVIRHMMNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|149202583|ref|ZP_01879555.1| glutaryl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149143865|gb|EDM31899.1| glutaryl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 407

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 72/412 (17%), Positives = 143/412 (34%), Gaps = 49/412 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +++ +A+  A+        L        R ++V+  P     +      GL  +    
Sbjct: 35  ERMIAASARTFAQE------VLQPRVIAAYREERVD--PDIFKEMG---QMGLLGTTIPE 83

Query: 123 SFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  +      + + A  +  +       +   S      +    +    + + P + S 
Sbjct: 84  EYGGLGANYVTYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRRKYLPGLASG 143

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                         +    GLTE   G+D A + ++  + + G        W  +SP++D
Sbjct: 144 -------------DLIGCFGLTEPDAGSDPAGMKTRAVRTTGGYRLTGSKMWISNSPIAD 190

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+   N       L
Sbjct: 191 VFVVWAKSEAHDGK--IRGFILEKGMKGLSAPKVGGKLSLRASVTGEIVMDNVEVPESAL 248

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQP 353
           L ++    GP         L+ A   ++   +  AE   +A R     R      L    
Sbjct: 249 LPNVQGLKGP------FGCLNRARYGIAWGVMGSAEFCWHASRQYGLDRKQFNRPLAQTQ 302

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +A++  +I      + R+    DEA +       A  M  + K   C  A  +  
Sbjct: 303 LFQLKLANMQTEITLGLQAALRVGRLMDEANA-------APEMISMIKRNNCGKALEIAR 355

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A +  GG+G  EE  + RH       +   G+ +   L +L   + G   F
Sbjct: 356 HARDMHGGNGISEEFQVIRHMVNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|330826585|ref|YP_004389888.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329311957|gb|AEB86372.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 399

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 141/413 (34%), Gaps = 46/413 (11%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           S    E   + + +           +      D+ + H A  AL+     DG     W R
Sbjct: 9   SPAWLEWPFLDDGHRRLAVELDAWCQDHLQHIDETDLHAACRALVSALGQDG-----WLR 63

Query: 123 SFEPVVRKQAHKIRAARL-----------YLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                  K     +AA L                  A    +     +  ++L  +    
Sbjct: 64  YCVVAGDKGQFGGQAAELDSRSLCIIRETLARHHALADFAFAMQGLGSGTISLAGSDAQK 123

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + P              + + +      L+E   G+D+AA++ + +   DG       
Sbjct: 124 AAYLP-------------AVARGTKIGAFALSEPDAGSDVAALSCRAEADGDGYVLNGSK 170

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D + + A+ +   G   +   + D    GL      + I     A+  L F
Sbjct: 171 TWISNGGLADFYCVFARTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLAS--LHF 228

Query: 292 SNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N        L     G    M+ L       A  ++   R ++ E + +A RR + G  
Sbjct: 229 ENCRVPRSCMLGPPDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQT 288

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKM 407
           L D  + + A  D+A  I  +  L++R A   D + ++ + E A A++ A        + 
Sbjct: 289 LADFQLTQAAFGDMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TES 341

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  VI  A++  GG G      + R YR+  +  I  G+     L +   + +
Sbjct: 342 AQQVIDRALQMFGGKGVTVGNPLERLYRDIRSLRIYEGATEVQKLIISREVLR 394


>gi|91975744|ref|YP_568403.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91682200|gb|ABE38502.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 404

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 123/354 (34%), Gaps = 37/354 (10%)

Query: 114 GLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +        A+ + A  +  +           S      +         K
Sbjct: 72  GLIGVTLPEDYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAYGDETQRK 131

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                 GLTE   G+D   + ++ +K++DG        
Sbjct: 132 KYLPKLASGEW-------------VGCFGLTEPDAGSDPGGMKTKAEKVADGYRLSGSKM 178

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++P++D F++ A+         +   + +    GL   ++  K+  R++ T E+   
Sbjct: 179 WISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEIVMD 236

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHV 344
                   LL +++   GP         L+ A   +S   +  AE     A  Y   R  
Sbjct: 237 GVVVPEEALLPNVSGLKGP------FGCLNRARYGISWGVMGAAEDCMQRARQYTLDRKQ 290

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
               L    ++++ +AD+  +IA     S R+    DE K        A  M  I K   
Sbjct: 291 FNRPLAATQLVQKKLADMQTEIALGVQASLRVGRLMDEGKV-------APEMISIVKRNN 343

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +   +
Sbjct: 344 CGKALDIARVARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRAI 397


>gi|94972228|ref|YP_594268.1| acyl-CoA dehydrogenase-like [Deinococcus geothermalis DSM 11300]
 gi|94554279|gb|ABF44194.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 430

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 132/379 (34%), Gaps = 33/379 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            E WD  +F      ++R+    GL        +       ++    A +Y + ++++G 
Sbjct: 79  AEWWDSGDFP--VREVMRKFGQLGLLGPTTPEEYGGAG--TSYSAYGAMMYELERVDSGL 134

Query: 151 LMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             + SV  + +   +    +    + + P + S E             +    GLTE  G
Sbjct: 135 RSAASVQGSLVMFPILNYGSEAQKRRYLPGLASGE-------------LIGCFGLTEPDG 181

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A+ ++  +  +         W  +SP++D  ++ A+ +      ++   +     
Sbjct: 182 GSDPGAMRTRAHRDGNAYVLHGNKMWITNSPVADLAVVWAKDDEG----IIRGFIVPTDT 237

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSV 325
            G    ++  K+  R++ T E+            L  S G    +  L       A  ++
Sbjct: 238 PGFSAPKIHRKMSLRASVTGEIVLEECRIPAENVLPGSGGLKSPLSCLTSARFGIAWGAM 297

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +   L  A+ Y   R   G  +  + +++  +  +A D +A   L++RL    D  + 
Sbjct: 298 GALEAVLQTALDYTGSRRTFGKPIAARQLVQDKLVRMATDHSAGLLLAWRLGQLKDTGR- 356

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                          K    ++A      A E +GG+G   E  + RH           G
Sbjct: 357 ------MNYAQVSYAKRNNVRVALQGARLARELLGGNGITTEYPVIRHMLNLETVDTYEG 410

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           + +   L V   L     L
Sbjct: 411 THDIHTLIVGRHLTGLGAL 429


>gi|38704005|ref|NP_310429.2| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. Sakai]
 gi|89108535|ref|AP_002315.1| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. W3110]
 gi|90111318|ref|NP_416210.4| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157154739|ref|YP_001462989.1| putative acyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|157161159|ref|YP_001458477.1| putative acyl-CoA dehydrogenase [Escherichia coli HS]
 gi|161367598|ref|NP_288129.2| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|161486218|ref|NP_753985.2| putative acyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|162138434|ref|YP_540894.2| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|162317576|ref|YP_852786.2| putative acyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|168751894|ref|ZP_02776916.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4113]
 gi|168756693|ref|ZP_02781700.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4401]
 gi|168762244|ref|ZP_02787251.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4501]
 gi|168770453|ref|ZP_02795460.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4486]
 gi|168775008|ref|ZP_02800015.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4196]
 gi|168782107|ref|ZP_02807114.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4076]
 gi|168789829|ref|ZP_02814836.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC869]
 gi|168800127|ref|ZP_02825134.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC508]
 gi|170019955|ref|YP_001724909.1| putative acyl-CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|170081354|ref|YP_001730674.1| acyl-CoA dehydrogenase [Escherichia coli str. K-12 substr. DH10B]
 gi|193069000|ref|ZP_03049959.1| acyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194429515|ref|ZP_03062037.1| acyl-CoA dehydrogenase [Escherichia coli B171]
 gi|195937379|ref|ZP_03082761.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208810378|ref|ZP_03252254.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4206]
 gi|208816948|ref|ZP_03258068.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4045]
 gi|208819134|ref|ZP_03259454.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4042]
 gi|209396182|ref|YP_002270764.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4115]
 gi|209919009|ref|YP_002293093.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215486870|ref|YP_002329301.1| putative acyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217329038|ref|ZP_03445119.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. TW14588]
 gi|218554262|ref|YP_002387175.1| putative acyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|218558564|ref|YP_002391477.1| acyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218689639|ref|YP_002397851.1| putative acyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218695256|ref|YP_002402923.1| putative acyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218705193|ref|YP_002412712.1| putative acyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|238900910|ref|YP_002926706.1| putative acyl-CoA dehydrogenase [Escherichia coli BW2952]
 gi|254793312|ref|YP_003078149.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018111|ref|ZP_05431976.1| putative acyl-CoA dehydrogenase [Shigella sp. D9]
 gi|256022642|ref|ZP_05436507.1| putative acyl-CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|260844001|ref|YP_003221779.1| putative acyl-CoA dehydrogenase [Escherichia coli O103:H2 str.
           12009]
 gi|261227860|ref|ZP_05942141.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258406|ref|ZP_05950939.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282825|ref|YP_003499643.1| acyl-coA dehydrogenase [Escherichia coli O55:H7 str. CB9615]
 gi|293415010|ref|ZP_06657653.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|293446069|ref|ZP_06662491.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|298380836|ref|ZP_06990435.1| acyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300898524|ref|ZP_07116857.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           198-1]
 gi|306815052|ref|ZP_07449208.1| putative acyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|307310734|ref|ZP_07590380.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|312966848|ref|ZP_07781066.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312969723|ref|ZP_07783906.1| putative acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|331668381|ref|ZP_08369229.1| putative acyl-CoA dehydrogenase [Escherichia coli TA271]
 gi|71164832|sp|P0A9V0|YDIO_ECO57 RecName: Full=Uncharacterized protein YdiO
 gi|71164833|sp|P0A9U9|YDIO_ECOL6 RecName: Full=Uncharacterized protein YdiO
 gi|71164834|sp|P0A9U8|YDIO_ECOLI RecName: Full=Uncharacterized protein YdiO
 gi|85675081|dbj|BAA15464.2| predicted acyl-CoA dehydrogenase [Escherichia coli str. K12 substr.
           W3110]
 gi|87081958|gb|AAC74765.2| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157066839|gb|ABV06094.1| acyl-CoA dehydrogenase [Escherichia coli HS]
 gi|157076769|gb|ABV16477.1| acyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|169754883|gb|ACA77582.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|169889189|gb|ACB02896.1| predicted acyl-CoA dehydrogenase [Escherichia coli str. K-12
           substr. DH10B]
 gi|187769509|gb|EDU33353.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4196]
 gi|188014143|gb|EDU52265.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4113]
 gi|189000281|gb|EDU69267.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4076]
 gi|189356154|gb|EDU74573.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4401]
 gi|189360636|gb|EDU79055.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4486]
 gi|189367501|gb|EDU85917.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4501]
 gi|189370613|gb|EDU89029.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC869]
 gi|189377542|gb|EDU95958.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC508]
 gi|192957795|gb|EDV88239.1| acyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194412479|gb|EDX28779.1| acyl-CoA dehydrogenase [Escherichia coli B171]
 gi|208724894|gb|EDZ74601.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4206]
 gi|208731291|gb|EDZ79980.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4045]
 gi|208739257|gb|EDZ86939.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4042]
 gi|209157582|gb|ACI35015.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC4115]
 gi|209912268|dbj|BAG77342.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215264942|emb|CAS09328.1| predicted acyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217318385|gb|EEC26812.1| acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. TW14588]
 gi|218351988|emb|CAU97720.1| putative acyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218361030|emb|CAQ98605.1| putative acyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|218365333|emb|CAR03054.1| putative acyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218427203|emb|CAR08089.2| putative acyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218432290|emb|CAR13180.1| putative acyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|222033451|emb|CAP76192.1| Uncharacterized protein ydiO [Escherichia coli LF82]
 gi|238862119|gb|ACR64117.1| predicted acyl-CoA dehydrogenase [Escherichia coli BW2952]
 gi|254592712|gb|ACT72073.1| predicted acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257759148|dbj|BAI30645.1| predicted acyl-CoA dehydrogenase [Escherichia coli O103:H2 str.
           12009]
 gi|260449182|gb|ACX39604.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|281178765|dbj|BAI55095.1| putative acyl-CoA dehydrogenase [Escherichia coli SE15]
 gi|290762698|gb|ADD56659.1| Acyl-coA dehydrogenase [Escherichia coli O55:H7 str. CB9615]
 gi|291322899|gb|EFE62327.1| acyl-CoA dehydrogenase [Escherichia coli B088]
 gi|291432658|gb|EFF05637.1| acyl-CoA dehydrogenase [Escherichia coli B185]
 gi|298278278|gb|EFI19792.1| acyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300357788|gb|EFJ73658.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           198-1]
 gi|305851700|gb|EFM52153.1| putative acyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|306908912|gb|EFN39408.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|307626818|gb|ADN71122.1| putative acyl-CoA dehydrogenase [Escherichia coli UM146]
 gi|309701920|emb|CBJ01232.1| Putative acyl-CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310338008|gb|EFQ03097.1| putative acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|312288312|gb|EFR16214.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312946295|gb|ADR27122.1| putative acyl-CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315061000|gb|ADT75327.1| predicted acyl-CoA dehydrogenase [Escherichia coli W]
 gi|315136336|dbj|BAJ43495.1| putative acyl-CoA dehydrogenase [Escherichia coli DH1]
 gi|320188381|gb|EFW63043.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. EC1212]
 gi|320641910|gb|EFX11278.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647366|gb|EFX16174.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H- str.
           493-89]
 gi|320652660|gb|EFX20929.1| putative acyl-CoA dehydrogenase [Escherichia coli O157:H- str. H
           2687]
 gi|320653045|gb|EFX21241.1| putative acyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658729|gb|EFX26406.1| putative acyl-CoA dehydrogenase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|323186159|gb|EFZ71514.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1357]
 gi|323187119|gb|EFZ72435.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           RN587/1]
 gi|323378428|gb|ADX50696.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
 gi|323937298|gb|EGB33577.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
 gi|323940638|gb|EGB36829.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323948114|gb|EGB44105.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
 gi|323956596|gb|EGB52334.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
 gi|326342060|gb|EGD65841.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. 1044]
 gi|331063575|gb|EGI35486.1| putative acyl-CoA dehydrogenase [Escherichia coli TA271]
          Length = 383

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|163758483|ref|ZP_02165571.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162284772|gb|EDQ35055.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 387

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 121/385 (31%), Gaps = 31/385 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   ++       +  ++I  GL+ +     F          +   +   
Sbjct: 23  ELYPHEAQVERTGHLDM-DLVREIQGKAIAAGLYAANIPEEFGGAGLDTPTWLLYEKELG 81

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A           V   S +    TP     +     + E                 L +
Sbjct: 82  RANYALHWTC---VARPSNILCAGTPEQRARYLEPCVAGEKWD-------------CLAM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLV 258
           TE   G+D+  + +  ++            +   + ++D  I           R    L+
Sbjct: 126 TEPGAGSDLRGMKASAKQDGSDWVLNGTKHFISHADIADFTIAFMATGEEDTPRGKKKLI 185

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
                D    G   +     + +R      LEF N       +LG+++            
Sbjct: 186 TAFFVDKGTPGYVVRDGYRNVSHRGYTNAVLEFDNCRIPAENVLGEVHKGFEVANTWLGA 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L      +     +   ++ +A  R   G  +     +   +AD+A+++ AA  +   
Sbjct: 246 TRLQVGATCLGRADRAFRHSVEWAATREQFGQPIGKFQGVSFKLADMAMEMKAAELMIME 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
               FD+      + A A++ A        +M   V  EA++  GG G ++E  + R +R
Sbjct: 306 AGWKFDQGTVSDADMAMAKLKA-------TEMLAMVADEAIQIHGGMGLMDELPLERIWR 358

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           ++    I  G+       +   L +
Sbjct: 359 DARIERIWEGTSEIQRHIISRALLR 383


>gi|221641178|ref|YP_002527440.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
 gi|221161959|gb|ACM02939.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131]
          Length = 560

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 133/371 (35%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 212 EIVEALAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 272 GGTDAQKATWLPKLASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKDGDE 318

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 319 WVVNGNKTWITHAARTHVMTLLARTDPETSDYRGLSMFLAEKVPGTDADPFPTPGMTGGE 378

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           ++  +G R     E+ F    GF +   N+  G   +  K L+       + +A  ++  
Sbjct: 379 IE-VLGYRGMKEYEIGFD---GFRVKGENLLGGVEGQGFKQLMQTFESARIQTAARAIGV 434

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +   
Sbjct: 435 AQNALEVGMQYAEERKQFGKALIEFPRVAGKLAMMAVEIMVARQLTYHSAWEKDHGQRCD 494

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+ 
Sbjct: 495 LEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYQISRILCDARILNIFEGAA 547

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 548 EIQAQVIARRL 558


>gi|146278601|ref|YP_001168760.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556842|gb|ABP71455.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 555

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 128/368 (34%), Gaps = 35/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 207 EIIDSLAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 266

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP    +W PKI S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 267 GGTPEQKAEWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKEGDD 313

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 314 WVVNGNKTWITHAARTHVMTLLARTDPETTDYRGLSMFLAEKMPGTDENPFPTPGMTGGE 373

Query: 275 LKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           ++  +G R     E+ F          L G        +        + +A  ++   + 
Sbjct: 374 IE-VLGYRGMKEYEIGFDGFRVKGANLLGGVEGQGFKQLMQTFESARIQTAARAIGVAQS 432

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +    EA
Sbjct: 433 ALEVGMQYAEDRKQFGKSLIEFPRVAGKLAMMAVEIMVARQLTYFSAWEKDHGQRCDLEA 492

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  ++R   ++   +I  G+    
Sbjct: 493 GMAKLL-------GARVAWASADNALQIHGGNGFALEYQVSRILCDARILNIFEGAAEIQ 545

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 546 AQVIARRL 553


>gi|264676529|ref|YP_003276435.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262207041|gb|ACY31139.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 387

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 27/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
            +   +  + +  + E +  +    IR           A    +     +  ++L  +  
Sbjct: 55  WLRHAVAGTAYGGAGEHIDTRTICLIR--ETLARHSGLADFAFAMQGLGSGAISLAGSEE 112

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K +   +              +        L+E   G+D+AA+  + +   D      
Sbjct: 113 QKKRYLSLV-------------ARGDAISAFALSEPDAGSDVAAMACEARLEGDHYVING 159

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +  ++D +++  +     G   +  L+ +    G       N I         L
Sbjct: 160 EKTWISNGGIADFYVVFVRTGEAAGSRGLSALIVEAGTPGFEIAERINVIAPH--PLARL 217

Query: 290 EFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +FSN        +     G    M+ L       A  S+   R ++ EA+  A  R + G
Sbjct: 218 KFSNCRVPAAQLVGAAGEGFKVAMRTLDVFRTSVAAASLGFARRAMDEALQRATSRKMFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G+L D  + +  +A +A  I +A  L++R A   D+ ++ + EAA A++ A        +
Sbjct: 278 GVLADFQLTQAKLAQMATQIDSAALLTYRAAWLRDQGENVTREAAMAKMTA-------TE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  VI  A++  GG G + E+ + R YRE  A  I  G+     L +   L K
Sbjct: 331 NAQQVIDAAVQIWGGLGVVSEQPVERLYREIRALRIYEGATEVQQLIIGRDLIK 384


>gi|298207516|ref|YP_003715695.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus
           HTCC2559]
 gi|83850152|gb|EAP88020.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus
           HTCC2559]
          Length = 392

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 141/379 (37%), Gaps = 45/379 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K +  P      +++     I  GL        + P     A   + +   +M +
Sbjct: 29  ARDWVKRDVSPIIEEYAQKAEFPKQIIGGLAEIGAFGPYIPEEYGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S  S         +    +    K + PK+ S E+                
Sbjct: 89  IERGDSGVRSTASVQSSLVMYPIWKYGSEEQRKKFLPKLASGEFMG-------------S 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G++   +T+  +   D         W  +SP  D  ++ A+  EGR+   +V
Sbjct: 136 FGLTEPDHGSNPGGMTTNFKDNGDHYLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F +         N+  G       L  L
Sbjct: 196 ERGME-----GFSTPETHNKWSLRASATGELIFQDVKVP---KENLLPGKSGLGAPLGCL 247

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLLA 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    +E K+ S + + A+           ++A  +  EA + +GG G   E SI RH
Sbjct: 308 WRLGVLREEGKATSAQISMAKR-------NNVEVAINIAREARQMLGGMGITGEYSIMRH 360

Query: 434 YRESPANSILLGSGNAMVL 452
                +     G+ +  +L
Sbjct: 361 SMNLESVITYEGTHDIHLL 379


>gi|261334054|emb|CBH17048.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 411

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 144/346 (41%), Gaps = 41/346 (11%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L           ++ S+   +     +T    + W PK+ 
Sbjct: 90  PEGDGGAGMDATAAVVIHHELSKVDPGFCLAYLAHSMLFVNNFYHASTAAQRERWLPKVL 149

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  + +   K S+G Y L+G K ++++  
Sbjct: 150 TGEH-------------IGAMGMSEPGAGTDVLGMLTTATKESNGKYILNGGKTWVTNGT 196

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D  ++ A+V+G      +   + +   +G    +  +K G R +   +L F N    +
Sbjct: 197 VADLVLVYAKVDGE-----ITAFVVEKGASGFSVGKKIDKCGMRGSHMCQLFFDNV---V 248

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQ 352
           LG+ N+     + +  ++  L+   ++++ M V +A+        YA  R   G  + + 
Sbjct: 249 LGEENLLGTEGKGLVAMMRNLEVERLTLAAMAVGIADRCVELMTCYANERKTFGKHIWNY 308

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++R IA+   +  AA +L++ ++ S     + +   + A  +      +   +A    
Sbjct: 309 GQIQRYIAETFAETEAAKSLTYAVSRSVAPG-NCNRLGSDAVKL------FAAPVAKRAA 361

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             AM+ +GG GY  +  + R +R++    I  G+  A   ++   L
Sbjct: 362 DNAMQVMGGMGYARDMPVERLWRDAKLLEIGGGTLEAHHKNITKDL 407


>gi|108802070|ref|YP_642267.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119871222|ref|YP_941174.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126438049|ref|YP_001073740.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108772489|gb|ABG11211.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119697311|gb|ABL94384.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126237849|gb|ABO01250.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 484

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 133/390 (34%), Gaps = 39/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+ +  P W  L   +   G +  ++ R         +  +    L+       
Sbjct: 52  PVALEYDQRQEFP-WPVLEE-AAQRGFYSPLFYRDLIGDPTGLSLPMFMEELF-WGCAGI 108

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + S +    +P     WAP+ F             K      L ++E  GG
Sbjct: 109 GLAIVMPALALSAIGQAASPEQMLQWAPECFGT-------PGDLK---LAALAISEPEGG 158

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +  ++  D         W  +  +++  ++ A V+  +G       +  G   
Sbjct: 159 SDVRNLRTTARRDGDDWIIDGHKMWIGNGGIANVHVVNAVVDQELGHRGQALFIVPGGTP 218

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF--------------------LLGDLNVSTGP 308
           GL   R  +K+G R++ T EL+F                           +     S   
Sbjct: 219 GLELVRKLDKMGCRASHTAELKFDGVRIPGDHLLGGEEKLEHKLAKAREAVEGARKSGSA 278

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                       A  ++   R +L     YA RR   G  +ID   +   +AD+A  I A
Sbjct: 279 ALGTFEQTRPMVAAQALGIARAALEYMTEYANRREAFGAPIIDNQGISFPLADLATQIDA 338

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R +                     ++K    ++A      A++ +GG GYI + 
Sbjct: 339 ARLLTWRASWMAATGVPFER------GEGSMSKLAASEVAVKATERAIQTMGGWGYITDH 392

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + + YR++   +I  G+     + +   L
Sbjct: 393 PVEKWYRDAKLYTIFEGTSEIQRMVISRAL 422


>gi|167524186|ref|XP_001746429.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775191|gb|EDQ88816.1| predicted protein [Monosiga brevicollis MX1]
          Length = 418

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 131/361 (36%), Gaps = 33/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++      G+  S  D    P +   A+ + A  +  +       +   S      + 
Sbjct: 77  RSIMNEFGELGMLGSTIDGYGCPGMSYVAYGLLAREVERVDSAYRSAMSVQSSLVMYPIH 136

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + E             +    GLTE   G+D  ++ ++ + +  
Sbjct: 137 AYGTEAHKEKYLPRLATGE-------------LVGAFGLTEPDHGSDPGSMATKAKAVDG 183

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D FI+ A ++G +  F+V R        GL   +++ K+  R+
Sbjct: 184 GYLLNGSKTWITNAPIADVFIIWANLDGDIRGFVVER----DGSEGLTTPKIEGKLSLRA 239

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + T ++   N F             V+ +K     L++A   ++   +  AE     A  
Sbjct: 240 SITGQIMLDNVFVPEEN----LFPTVKGLKGPFGCLNNARYGIAWGALGAAESCFEVARQ 295

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    +M++  AD+  +I        R+         R E   +   + 
Sbjct: 296 YTLDRQQFGRPLAANQLMQKKFADMLTEINIGLQACLRVGRL------REEHGEFTPDLV 349

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +     + +GG+G  E+  + RH       +   G+ +   L +   
Sbjct: 350 SMIKRNSCGKALDIARMTRDMLGGNGISEDYHVLRHAINLETVNTYEGTHDIHALILGRA 409

Query: 458 L 458
           +
Sbjct: 410 I 410


>gi|188592185|ref|YP_001796783.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938559|emb|CAP63546.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 391

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 129/376 (34%), Gaps = 30/376 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E  D+ + +P  H  L R +   +      + +          +               +
Sbjct: 33  EEIDRDQRYPVEH--LPRLLEAKISGMFVPKEYGGEGASLTAVVAVVEAVAQGCASTSAI 90

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++     A  + L  +    +     +  R               A+   L+E+  G+D 
Sbjct: 91  LAALALGAFPILLAGSEAQKQALLGGLAGR-------------GEAVNFALSEREAGSDP 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           +AI +   +  DG        W  +   S  FI+ A+         +   +      GL 
Sbjct: 138 SAIQATAVREGDGWRIRGEKCWLGNGGHSKHFIVFARTGDVAARKAISAFVVPRDTEGLV 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               ++K+G R   T  L       ++  D  V          L  L    + V+     
Sbjct: 198 VDFYEDKMGIRGTTTTNLRLD---VWVPADSIVGPEGDGLKLALATLTVGRVVVAAQANG 254

Query: 332 LAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
           +A   + A RR+       G  LID   +   +AD A+ ++AA   ++  A  +DE K  
Sbjct: 255 IALCAYDAARRYAVTRKTFGHTLIDHQGVGFKLADAAMHLSAARMFTYEAARGYDEGKDI 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A A       K +  + +  V+ +A++ +GG GY++   + R YR+     I  G+
Sbjct: 315 GTLGAMA-------KLYASEASHDVVDDAVQILGGRGYVKPNVVERCYRDQRIVEIYEGT 367

Query: 447 GNAMVLDVLNLLEKGT 462
                + +   + KG 
Sbjct: 368 SEIQRIVLARAVRKGA 383


>gi|260549545|ref|ZP_05823763.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Acinetobacter sp.
           RUH2624]
 gi|260407338|gb|EEX00813.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Acinetobacter sp.
           RUH2624]
          Length = 548

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/492 (16%), Positives = 173/492 (35%), Gaps = 70/492 (14%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +      +       + A          
Sbjct: 12  ERVTVNPEVSVALKAFADAGLMSTAFSTEWNGMSLPNTIERAGMAYLMGANPGTTGYAFL 71

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++     P+  K +   + + +   T             + L+E + G+ +  I
Sbjct: 72  TIGNANLLMAHGDPKKVKPYIDAMIAGDCFGT-------------MCLSEPQAGSSLGDI 118

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++    +DG Y L G+K ++S    D       ++LA++             +  F VP
Sbjct: 119 RTRAVPTADGRYRLFGNKMWISGGEHDISGNIVHLVLAKIPDEQGKLPAGVQGISLFTVP 178

Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D     G  N +    + +K+G R      L F              G L+G+   
Sbjct: 179 RKLVDEQGNIGERNDVALAGINHKMGYRGTVNCVLNFGEGRYTPEGEPGAIGELVGEAGK 238

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              +I  
Sbjct: 239 GLSYMFHMMNEARISVGLGAAALGYTGYLHALDYAKNRLQ-GRSRSERDPSSPQIPIIQH 297

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCK 406
             ++R +       + A AL    A   D+      ++ + +      ++ P+ K W  +
Sbjct: 298 ADVRRMLLAQKSYASGALALCLYAAKLTDDIHSLEDSEQQKKAQLLLDLLTPVVKSWSSE 357

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN--- 463
                   A++  GG GY  E ++ + YR++  N I  G+     +D+L    +  +   
Sbjct: 358 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQAMDLLGRKTRINDGLA 417

Query: 464 ---LFEQLFSTLEQDLG-SSGKKVITILRDSISLCKE-DKGLARFLTEKIALASSAAALY 518
              L E++  T+ Q    ++ ++    L  +    +E    L       + LA++A  L 
Sbjct: 418 MHVLNEKITGTIAQAQSIAALQRHANTLAQTWQRVQEVTAALHAIKDMDMQLANAANYLE 477

Query: 519 RAGMNDIADVFL 530
             G   +  ++L
Sbjct: 478 AFGHLVVGWLWL 489


>gi|260855518|ref|YP_003229409.1| putative acyl-CoA dehydrogenase [Escherichia coli O26:H11 str.
           11368]
 gi|257754167|dbj|BAI25669.1| predicted acyl-CoA dehydrogenase [Escherichia coli O26:H11 str.
           11368]
 gi|323153069|gb|EFZ39338.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           EPECa14]
          Length = 383

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 137/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+  +  I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRSERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|170768793|ref|ZP_02903246.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
 gi|170122341|gb|EDS91272.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
          Length = 383

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              ++    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMQALAENGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           + S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVESSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVDESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTALEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|84685019|ref|ZP_01012918.1| putative acyl-coa dehydrogenase protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666751|gb|EAQ13222.1| putative acyl-coa dehydrogenase protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 530

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 145/415 (34%), Gaps = 43/415 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLHCSIWD 121
             AQ  A  A      +      G+R        +V    A  A+  + +  G    +  
Sbjct: 34  EIAQHFASFAEE---VIAPTDEIGDRIGAKLVDGRVVLPDAVKAMFTQYVEGGWPGLMLP 90

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +  +            + + A      L+S +V    +     T      + P + S 
Sbjct: 91  EDYGGMGVDGVTGGVIHEILMGANHAFQMLVSLAVGHNRVFQNFGTDAQKAKYLPLLASG 150

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +Y  T             + LTE   G+D+  I ++  +  D ++ ++G K F+S    D
Sbjct: 151 DYLGT-------------MALTEPGAGSDLGRIRTRAVQDGD-VWRITGEKIFISGGDQD 196

Query: 242 A-----FIMLAQV-EGRVGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELE 290
                  ++LA+  E   G   +          DGS N +   R++ K+G     T +L 
Sbjct: 197 MSKGVLHMVLARTGEMDSGVKGLSLFACLSDRADGSRNAVNVTRIEEKMGLHLQPTCQLA 256

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-- 348
           F      L+G +      + ++     +D A+  V+    +   A  YA  R    G   
Sbjct: 257 FDGAEAELIGAVGQGLRAMFEIMNHARVDVALQGVAHSARAYDIASSYAAERVQGRGPDG 316

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              +     ++R + +I      A A++     + +   +         ++  + K++  
Sbjct: 317 PVTIDKHGDVRRMLDEIDAIAMGARAMTHLALVTLESGDNPW----LLELLTHVIKWYAS 372

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +         M+ +GG GY++E  I + YR+    +I  G+     + V   L +
Sbjct: 373 EQGLRAAETGMQVLGGYGYLQEYRIEQTYRDLRIAAIYEGASGIHAMGVAARLLR 427


>gi|110634822|ref|YP_675030.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110285806|gb|ABG63865.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 406

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 131/377 (34%), Gaps = 41/377 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SV 156
           E  PA    +      GL        +             AR           +MS  S 
Sbjct: 61  ETDPAIFREMG---EAGLLGVTIPEEYGGAGANYVSYGLVAREVERVDSGYRSMMSVQSS 117

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    +    K + PK+ S E+                 GLTE   G+D  ++ +
Sbjct: 118 LVMFPIYAYGSEDQRKKYLPKLASGEF-------------IGCFGLTEPDAGSDPGSMKT 164

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + +KI  G   +    W  ++P++D F++ A+         +   + +    GL   ++ 
Sbjct: 165 RAEKIDGGYRLVGSKMWISNAPIADVFVVWAKS--AAHDNQIRGFVLEKGMKGLSAPKIG 222

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+  R++ T E+           LL +++   GP         L+ A   +S   +  A
Sbjct: 223 GKLSLRASITGEVVMDGVEVPEDALLPNVSGLKGP------FGCLNRARYGISWGVMGAA 276

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E     A  Y   R   G  L    + ++ +AD+  +IA     S R+    DE K    
Sbjct: 277 EDCWHRARQYGLERQQFGRPLAATQLFQKKLADMQTEIALGLQASLRVGRLMDEHK---- 332

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              +A  M  I K   C  A  +   A +  GG+G   E  + RH +     +   G+ +
Sbjct: 333 ---FAPEMISIVKRNNCGKALDIARMARDMHGGNGIQIEYQVMRHSQNLETVNTYEGTHD 389

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 390 VHAL-ILGRAQTGLQAF 405


>gi|319950206|ref|ZP_08024133.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319436110|gb|EFV91303.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 396

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 120/358 (33%), Gaps = 26/358 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPR 169
              GL      + +  +       +  A  +    L    L  + +  +  ++    T  
Sbjct: 52  ADMGLFGYAIPQRWGGLGLDLTQDVELAMEFGYTTLAMRSLFGTNNGIAGQVLVNFGTDE 111

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               W   I S E             V     LTE   G+  A +T++  +         
Sbjct: 112 QKARWLGPIASGE-------------VIASFALTEDGAGSSPAGLTTRAVRDGADWVIDG 158

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
             ++  ++P++  F++ A+          +   L      G+       K+G     T E
Sbjct: 159 TKRFITNAPLAGLFVVFARTRPADADGTGIAVFLVPADTPGVTVGPKDKKMGQEGAWTAE 218

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           + F          + GD +              +  A ++V   + +L E++ +A     
Sbjct: 219 VSFQGVRVPHDALVGGDEDAGYRAAMTSLARGRVHIAALAVGAAQRALDESLAHATTATQ 278

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G ++ +  +++  +ADI + + A  A+    A  +   + R       RI     K +C
Sbjct: 279 GGTVIGEFQLVQAMLADIQVGVMAGRAMVREAAAKYHSGEDR-------RIAPSAAKLYC 331

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
            +M       A++  GGSGYI    + R YR+     +  G+     L +   L +  
Sbjct: 332 TEMVGRAADLAVQIHGGSGYIRGVPVERIYRDVRLLRLYEGTSEIQRLIIGGGLVRAA 389


>gi|327252812|gb|EGE64466.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           STEC_7v]
          Length = 383

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 137/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+  +N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLNNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|194438552|ref|ZP_03070641.1| acyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|253773350|ref|YP_003036181.1| acyl-CoA dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161755|ref|YP_003044863.1| putative acyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|194422562|gb|EDX38560.1| acyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|242377419|emb|CAQ32170.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253324394|gb|ACT28996.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973656|gb|ACT39327.1| predicted acyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|253977850|gb|ACT43520.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|323973925|gb|EGB69097.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
          Length = 383

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 139/362 (38%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +              ++AQ+E     +P    A ++ 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGIPADYV-------TQMLAQMEVSKCGAP----AFLIT 88

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +     + +   T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 89  NGQCIHSMRRFGS---AEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|225852588|ref|YP_002732821.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256263921|ref|ZP_05466453.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640953|gb|ACO00867.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|263094065|gb|EEZ17987.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409107|gb|ADZ66172.1| glutaryl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326538813|gb|ADZ87028.1| glutaryl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 394

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 129/376 (34%), Gaps = 35/376 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +  K+  R++ T E+            L   +G          L+ A   +S   +  AE
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPSVSGLKGPFG---CLNRARYGISWGVIGAAE 265

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K     
Sbjct: 266 DCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGIQASLRVGRLFDEGK----- 320

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ + 
Sbjct: 321 --MAPEMISIVKRNNCDKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDV 378

Query: 450 MVLDVLNLLEKGTNLF 465
             L +L   + G   F
Sbjct: 379 HAL-ILGRAQTGIQAF 393


>gi|221067808|ref|ZP_03543913.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712831|gb|EED68199.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 392

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 139/384 (36%), Gaps = 29/384 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++ E  PA H + +     GL       ++       ++ +      +MA
Sbjct: 20  EKINPYVDAWEEEEIFPA-HQVFKGLGDLGLLGLTKPEAYGGSGLDYSYSL------MMA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +  +   M TP + +       S        AP     +   +G++E
Sbjct: 73  ETLGHIRCGGVPMAIGVQTDMCTPALARFG-----SDGLREQFLAPAIAGEMVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGCFLVP 259
              G+D++ I S  +K  D         W  +S  +D   ML               +VP
Sbjct: 128 PGAGSDVSGIRSHARKDGDDYVISGQKMWITNSIQADWMCMLVNTSEGPVHKNKSLIMVP 187

Query: 260 RLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
                      G+   +   KIG  S+ T  L F          +     G +  M+   
Sbjct: 188 LREGPRGKLTKGVEVAQKLRKIGMNSSDTGLLFFDEVRVPQRYLVGQEGQGFIYQMQQFQ 247

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L ++   +  M   + + I +A++R + G  LIDQ  ++  +A++  ++ A  AL++
Sbjct: 248 EERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAELQTEVEALRALTY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A  +   +        A  +A + K    ++   V    ++  GG G+  +  ++R Y
Sbjct: 308 RAAQIYMAGQD-------ALQLASMAKLKSGRLTREVADTCLQFWGGMGFTWDNRVSRLY 360

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+    SI  G+   M+  +   +
Sbjct: 361 RDGRLGSIGGGADEVMLGIIGKTM 384


>gi|90419691|ref|ZP_01227601.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336628|gb|EAS50369.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 407

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 120/323 (37%), Gaps = 40/323 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +         + + P++ + EY                 GLTE   G+D   +
Sbjct: 117 SSLVMYPIFAYGDEAQRRKYLPRLATGEY-------------VGCFGLTEPDAGSDPGGM 163

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +KI  G        W  +SP++D F++ A+         +   + D    GL   +
Sbjct: 164 TTRAEKIDGGYRLSGAKIWISNSPIADVFVVWAKSAAHDNK--IRGFILDKGMKGLSAPK 221

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+  R++ T E+           LL +++   GP         L+ A   +S   + 
Sbjct: 222 IEGKLSLRASITGEIVMDGVEVGEDALLPNVSGLGGP------FGCLNRARYGISWGAMG 275

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R   G  L    ++++ +AD+  +IA     S R+   FDE    
Sbjct: 276 AAEDCWKRARDYTMERTQFGRPLAQTQLIQKKLADMQTEIALGLQGSLRVGRLFDEG--- 332

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A A  M  + K   C  A  +   A +  GG+G + E  + RH +     +   G+
Sbjct: 333 ----AMAPEMISLVKRNNCGKALDIARTARDMHGGNGIMGEYHVMRHAQNLETVNTYEGT 388

Query: 447 GNAMVLDVLNLLEKGTNLFEQLF 469
            +   L    +L K     +  F
Sbjct: 389 HDVHAL----ILGKAQTGLQAFF 407


>gi|54024416|ref|YP_118658.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015924|dbj|BAD57294.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 596

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 94/553 (16%), Positives = 185/553 (33%), Gaps = 88/553 (15%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
             F     +  +   +       +  A     N  Q   +   GER   V   P     +
Sbjct: 28  ERFADHSRETFDGFLDLCEDLATRYFAPHNKANDAQEPRFD--GER---VTIIPEVKDAV 82

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +      L  +  D     +      +      +  A +     +  ++ +A+++A   +
Sbjct: 83  QAFGKANLVGAAMDAEVGGMQLPSVVEAAGFAWFQAANVGTAGYVFLTIGNANLLAAHGS 142

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
           P     +               PM +      + L+E + G+ +A I ++ +   DG Y 
Sbjct: 143 PEQVDRFVK-------------PMVEGRFTGTMCLSEPQAGSSLADIVTRAEPQEDGTYR 189

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271
           L G K ++S    +       ++LA++ G       +  F+VP+ L D     G+ N + 
Sbjct: 190 LFGSKMWISGGDHELTENIVHLVLAKIPGGPAGTKGISLFVVPKYLVDADGSLGARNDVT 249

Query: 272 YQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              L +K+G R      L F              G+L+G+ +     +  M     L   
Sbjct: 250 LAGLNHKMGYRGTVNTVLNFGEGRHTPGGAAGAVGYLVGEPHRGLSYMFHMMNEARLGVG 309

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAAT 370
           + + +       +++ YAR R                 +I+   +KR +      +  A 
Sbjct: 310 LGATALGYTGYLKSLRYARERQQGRAVTAKDPATPQIPIIEHADVKRMLLAQKSYVEGAL 369

Query: 371 ALSFRLANSFDEAKSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AL        D A++    A        I+  + K W  +        A++  GG GY  
Sbjct: 370 ALLLYCNRLVDLARTDPASAREHTLLLEILTGVAKSWPSQWCLEANNLAIQVHGGYGYTR 429

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF--------------- 469
           E  + +HYR++  N I  G+     +D+L   +++        L                
Sbjct: 430 EYDVEQHYRDNRLNPIHEGTHGIQGMDLLGRKVIQHEGASLRLLAQRIAASVAAARALGG 489

Query: 470 --STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527
             + L + L +S ++++T+    +S       +A          +S   L   G   +A 
Sbjct: 490 EPAELAEALDASWQRLVTVTTAMLSAGDPAATMA----------NSTIYLEAFGHIVLAW 539

Query: 528 VFLENRFLDNCHS 540
           ++LE       H 
Sbjct: 540 IWLEQAVAAAGHD 552


>gi|300787183|ref|YP_003767474.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299796697|gb|ADJ47072.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 386

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 140/380 (36%), Gaps = 26/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
              GP  + W+     PA H L  +    GL    +D ++        H         + 
Sbjct: 21  KEIGPYADDWEANGSFPA-HELFPKLAELGLLGLEYDPAYGGQGAD--HLCTVILHEELG 77

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           ++    +         M     TP +H+       S E       P         + +TE
Sbjct: 78  RVGPAGVALGIGIQTDM----ATPSLHRYG-----SEELKQRYLVPAISGEAVCAVAVTE 128

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGCFLVPR 260
              G+D+AA+T++  +  D         +  +   +D   +LA+      G      + +
Sbjct: 129 PDTGSDVAALTTRAVRDGDDWVINGSKAYITNGTQADWICLLARTSDKPAGGGAGVGLSQ 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IY 317
           ++      G    R  +K+G RS+ T EL F++    +   +  +  G  + M       
Sbjct: 189 IIVPADTPGFHVSRKLDKLGMRSSDTAELTFTDARVPVANTIGEIDLGFYQQMSQFQNER 248

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L     +V GM  +L     Y + R V G  LID   +   +A+++  +      ++  A
Sbjct: 249 LAMGYAAVGGMETALTRTADYLKTRKVFGKPLIDNQHLAFTLAELSARLDVLRHYNYAAA 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            ++   +            A + K    ++A  + A  ++  G  GY+EE   AR++R+S
Sbjct: 309 EAYIRGED-------VNRFATVGKLEAGRLAREISATCLQFHGAIGYMEEMWTARYFRDS 361

Query: 438 PANSILLGSGNAMVLDVLNL 457
           P  SI  G+   M+  +  L
Sbjct: 362 PVWSIGGGADEVMLYVLSRL 381


>gi|146299050|ref|YP_001193641.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146153468|gb|ABQ04322.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae
           UW101]
          Length = 393

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 82/379 (21%), Positives = 142/379 (37%), Gaps = 45/379 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K E  P      +++     I  GL        + PV    A   + +   +M +
Sbjct: 29  ARAWVKREVSPIIEEYAQKAEFPKQIIKGLGEIGGFGPYIPVEYGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S +S         +           + PK+ + EY                
Sbjct: 89  IERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKLATGEY-------------IGC 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G+D  ++ +  + + D         W  ++P +D  ++ A+  EGR+   +V
Sbjct: 136 FGLTEPDHGSDPGSMITNFKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F N        L   +G       L  L
Sbjct: 196 ERGME-----GFTTPETHNKWSLRASATGELIFDNVKVPKENFLPNKSGLGA---PLGCL 247

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   ++   +  A      A+ YA+ R   G  +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQKKLAEMITEITKAQLLT 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    +E K+ + + + A+            MA  +  EA + +GG G   E SI RH
Sbjct: 308 WRLGVLRNEGKATTAQISMAKR-------NNVNMAIEIAREARQMLGGMGITGEYSIMRH 360

Query: 434 YRESPANSILLGSGNAMVL 452
                +     G+ +  +L
Sbjct: 361 MMNLESVITYEGTHDIHLL 379


>gi|331697784|ref|YP_004334023.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952473|gb|AEA26170.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 600

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 96/558 (17%), Positives = 182/558 (32%), Gaps = 78/558 (13%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERWD- 95
             D LL   +                   +        +A  +              +D 
Sbjct: 12  DLDFLLHDWLQVEKLTARPRFAAHDRDTFAAVLDLAHDVATEHFAPHRKISDSREPEFDG 71

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V       A LR     G+  +  D +   +     H +  A    +     G    P
Sbjct: 72  ERVHLPDEVGAALRVLADTGMIGATMDEAVGGMQLP--HTVAQACFLWLHAANVGSAAYP 129

Query: 155 --SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             SV +A+++    +P     W   I    +  T             + L+E + G+ ++
Sbjct: 130 FLSVANANLLLAHGSPEQIDTWVRPIVEGRFMGT-------------MCLSEPQAGSSLS 176

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            +T++ +   DG Y L+G K ++S    +       ++LA+V G       +  F+VPR 
Sbjct: 177 DVTTRAEPQPDGTYRLTGTKMWISGGDHELSENIVHLVLARVPGSPPGVKGISLFVVPRF 236

Query: 262 LED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVST 306
           L       G  N +    L +K+G R      L F              G+L+G+ N   
Sbjct: 237 LVAPDGSIGERNDVVLAGLNHKMGYRGTVNTLLNFGEGRHTPGGRAGAVGYLVGEQNRGL 296

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVM 355
             +  M     +     + +        A+ YAR R                 +I    +
Sbjct: 297 AQMFHMMNEARVGVGAGATALGYAGYLHALDYARSRPQGRPVAAKDPAAPQVPIIAHADV 356

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAP 409
           KR +      +  A AL    A   DE ++  + A          ++ P+ K W  +   
Sbjct: 357 KRMLLASKSYVEGALALVLYCARLLDEEQTADDPADRERAHLLLEMLTPVAKSWPAQWCL 416

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467
           A    A++  GG GY  E  + + YR++  N+I  G+     +D+L    + +G      
Sbjct: 417 AANDLAIQVHGGYGYTREYDVEQLYRDNRLNAIHEGTHGIQAIDLLGRKAVMQGGAGLAL 476

Query: 468 LFSTLEQD----------LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
           L  T+                    +   +   +++      +      ++ LA+++  L
Sbjct: 477 LAETIAATTGRAARADGLAAEFAGALDAAVARIVAVTATLWAVGDL---EVTLANASVYL 533

Query: 518 YRAGMNDIADVFLENRFL 535
              G   +  ++LE    
Sbjct: 534 EAVGHVVVGWLWLEQLLA 551


>gi|301647878|ref|ZP_07247660.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           146-1]
 gi|301074019|gb|EFK88825.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           146-1]
          Length = 384

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|307328363|ref|ZP_07607539.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885936|gb|EFN16946.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 408

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 131/395 (33%), Gaps = 46/395 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIW--DRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ E  P    +++ +   GL+   +   + F+P        +           
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKIGLYSLDFYAQQYFDPTGLGIPMTM---EELFWGDA 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  +  +A  V    T      W P+++                       +E  
Sbjct: 84  GIALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DPDDVKVAAFCSSEPD 133

Query: 207 GGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
            G+D+ ++ ++       D         W  +  +++  +++A V+  VG       +  
Sbjct: 134 AGSDVGSMRTRAVYDEAKDEWVLSGTKTWATNGGIANVHVVVAVVDPEVGSKGHASFIIP 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVE 310
               GL   +   K G R++ T E+            L                +    E
Sbjct: 194 PGTPGLSQGQKFKKHGIRASHTAEVVLDQVRVPGSCLLGGKEKLDERLARARERAKTGGE 253

Query: 311 DMKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+ 
Sbjct: 254 RLKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTRQQFGRPIIDNQGVAFQLADMR 313

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I AA  + +R +      K              ++K +  + A  V A+A++ +GG+G
Sbjct: 314 TRIDAARLMVWRASWMAVTGKPFESA------EGSMSKLFASETAKQVTAQAVQILGGNG 367

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  E  + R +R++   +I  G+     L +   L
Sbjct: 368 FTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 402


>gi|239831903|ref|ZP_04680232.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824170|gb|EEQ95738.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG
           3301]
          Length = 394

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 128/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVA 163
            L R     GL        +             AR           +MS  S      + 
Sbjct: 53  ELFRLMGQAGLLGVTLPEEYGAANAGYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D A + ++ +KI  
Sbjct: 113 AYGSEEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGMKTRAEKIDG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+         +   + +    GL   ++  K+  R+
Sbjct: 160 GYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFVLEKGMKGLSAPKIGGKLSLRA 217

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+  +        LL +++   GP         L+ A   +S   +  AE     A
Sbjct: 218 SITGEIVMNGVEVSEDALLPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCWFRA 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R      L    + ++ +AD+  +IA     S R+   FDE K        A  
Sbjct: 272 RQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-------MAPE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 325 MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|331657673|ref|ZP_08358635.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
 gi|315299709|gb|EFU58949.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           16-3]
 gi|331055921|gb|EGI27930.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206]
          Length = 384

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLKTGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|226308334|ref|YP_002768294.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187451|dbj|BAH35555.1| probable glutaryl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 390

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 117/360 (32%), Gaps = 33/360 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     G+     +      +   A+ +    L  +       +      +   + 
Sbjct: 52  RELAKELGALGVLGMHLEGYGCAGMSATAYGLACQELEAVDSGIRSLVSVQGSLAMFAIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ + E                  GLTE   G++   + +  ++  D
Sbjct: 112 HNGSEEQKEEWLPRMAAGE-------------AIGCFGLTEPDFGSNPGGMRTNAKRDGD 158

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  V  F+VP         G     +KNK+  R+
Sbjct: 159 DWVLNGTKMWITNGSIADVAVVWARTDDGVRGFVVPA-----DTPGFSAPEIKNKMSLRA 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +        L  + G       L  L+ A   +        R  L  AI Y
Sbjct: 214 SVTSELVLEDVRLPASAMLPKARGLS---GPLGCLNEARFGIIFGAMGAARDCLETAISY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R V    L    + +  IAD+A+++     L+  L    D    R E+         
Sbjct: 271 ARDRKVFDKSLAAYQITQAKIADMAVELGKGQLLAIHLGRLKDAGTVRPEQ-------VS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 324 TGKLNNVREAIKIARECRTILGANGITLEYPVIRHANNLESVLTYEGTSEVHQLVIGRAL 383


>gi|71754657|ref|XP_828243.1| isovaleryl-coA dehydrogenase [Trypanosoma brucei TREU927]
 gi|70833629|gb|EAN79131.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei]
          Length = 411

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 145/346 (41%), Gaps = 41/346 (11%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           P     A     A + +  +L           ++ S+   +     +T    + W PK+ 
Sbjct: 90  PEGDGGAGMDATAAVVIHHELSKVDPGFCLAYLAHSMLFVNNFYHASTAAQRERWLPKVL 149

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           + E+                +G++E   GTD+  + +   K S+G Y L+G K ++++  
Sbjct: 150 TGEH-------------IGAMGMSEPGAGTDVLGMLTTATKESNGKYILNGGKTWVTNGT 196

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D  ++ A+V+G+     +   + +   +G    +  +K G R +   +L F N    +
Sbjct: 197 VADLVLVYAKVDGK-----ITAFVVEKGASGFSVGKKIDKCGMRGSHMCQLFFDNV---V 248

Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQ 352
           LG+ N+     + +  ++  L+   ++++ M V +A+        YA  R   G  + + 
Sbjct: 249 LGEENLLGTEGKGLVAMMRNLEVERLTLAAMAVGIADRCVELMTCYANERKTFGKHIWNY 308

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++R IA+   +  AA +L++ ++ S     + +   + A  +      +   +A    
Sbjct: 309 GQIQRYIAETFAETEAAKSLTYAVSRSVAPG-NCNRLGSDAVKL------FAAPVAKRAA 361

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             AM+ +GG GY  +  + R +R++    I  G+  A   ++   L
Sbjct: 362 DNAMQVMGGMGYARDMPVERLWRDAKLLEIGGGTLEAHHKNITKDL 407


>gi|84501724|ref|ZP_00999896.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84390345|gb|EAQ02904.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 386

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 121/292 (41%), Gaps = 14/292 (4%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +  +  + E               + + +TE   G+D+AAI ++ +   D  Y L+G K 
Sbjct: 100 YLDRFATSEQKARFLPGAVSGETIMAIAMTEPDTGSDLAAIRTRAEDRGDH-YLLNGSKT 158

Query: 234 FLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++S+  + D F++ A+   + G   +   +      G    R   K+G     T E+ F 
Sbjct: 159 YISNGVIGDLFVVAARTGEKRGRIGL--FVVMAGMEGFSLGRHLKKMGLPVQDTAEIRFD 216

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       LLGD  +    + +   +    SAI S+S  + +    + + + R   G  +
Sbjct: 217 DVRVPKENLLGDPGMGFAYMAECLAVERTMSAISSLSHAQAAFDITLEFVKERRAFGKPV 276

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                 +  +AD+   + AA A   +     ++ +   E+AA A+++       C ++  
Sbjct: 277 GAFQNTRFVMADLRARLDAAQAYLDQCVVLANDERLTPEDAAAAKLL-------CSEVQG 329

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            V+   ++  GG+GY++E  I+  +R++    I  G+   M   +   L  G
Sbjct: 330 DVVDAGLQLHGGAGYMDEYEISHMFRDARIARIYAGTSEIMKEIIGRGLGLG 381


>gi|33594105|ref|NP_881749.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis Tohama I]
 gi|33599745|ref|NP_887305.1| putative acyl-CoA dehyrdogenase [Bordetella bronchiseptica RB50]
 gi|33564179|emb|CAE43458.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis Tohama I]
 gi|33567342|emb|CAE31255.1| putative acyl-CoA dehyrdogenase [Bordetella bronchiseptica RB50]
 gi|332383521|gb|AEE68368.1| putative acyl-CoA dehyrdogenase [Bordetella pertussis CS]
          Length = 387

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 130/401 (32%), Gaps = 27/401 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L   A     +A     +   +GP     D+ + +P     +   +            +
Sbjct: 8   ALDDAATRWQTLAERLGRE--RFGPLAPELDRDQRYP--WETIEALVEHKFAGLFLPTQW 63

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                     + A             +M      A  + L  T      +  ++      
Sbjct: 64  GGQGANLTTTVAAVEALGTHCASTSAIMCAYQLGAFPILLAGTDAQKDFYLREMTLGR-- 121

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                       A    L+E+  G+D AAI +   +  DG        W  +   S  ++
Sbjct: 122 ------------ATSFALSERIAGSDAAAIEATATREGDGWRLRGEKYWIGNGGASRYYV 169

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--FGFLLGDL 302
           + A+ +   G   V   + D    G     L +K+G R   T  L+          +G+L
Sbjct: 170 VFAKTDPAAGGRGVSAFMVDKEQPGAEIDELSDKMGIRGTQTSNLKLDLVVPDSARVGEL 229

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N +         +  +  A  S+     +  EA   A  R   G  + +   +   +AD+
Sbjct: 230 NRALRLALQTLNVGRIMVAAQSLGVALGAYREAAGRAVARRAFGQPIGENQAIGFRLADM 289

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A +I+AA  + +  A ++D  +  S   A A       K +  +++  V+   ++  GG 
Sbjct: 290 ATEISAARMMLYEAARAYDAGQDVSNLGAMA-------KLFSSEVSHRVVDNTVQIWGGL 342

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           GY +     R YR+     I  GS     L +   + K   
Sbjct: 343 GYCKPTVAERLYRDQRILEIYEGSSEIQRLVLSRAVRKEAE 383


>gi|240172395|ref|ZP_04751054.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 460

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 149/412 (36%), Gaps = 41/412 (9%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    +LAR  +    ++    P    +D+ +  P W  L   +   G +  ++ R    
Sbjct: 8   TAAQHDLARRTHEFAEEVIR--PVALDYDQRQEFP-WPVLEE-AARRGFYSPLFYRDLIG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L+       G  +     + S +    +P     WAP+ F       
Sbjct: 64  DPTGLSLPMFMEELF-WGCAGIGLAIVMPALALSAIGQAASPEQMLQWAPECFGT----- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 K      L ++E  GG+D+  + ++ ++  D         W  +  +++  ++ 
Sbjct: 118 --PGDLK---LAALAISEPEGGSDVRNLRTRARRDGDDWIIDGHKMWIGNGGIANVHVVN 172

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--- 303
           A V+  +G       +  G   GL   R  +K+G R++ T EL F+         L    
Sbjct: 173 AVVDEDLGHRGQALFVVPGGTPGLELVRKLDKLGCRASHTAELRFNGARVPGANLLGGQE 232

Query: 304 -------VSTGPVEDMK----------ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                   +   V   K                 A  ++   R +L  A  YA  R   G
Sbjct: 233 KLEHKLAKARELVAGGKRSSSATLGTFEQTRPMVAAQAIGIARAALEYATSYATEREAFG 292

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G +ID   +   +AD+A  I AA  L++R +             ++ R    ++K    +
Sbjct: 293 GPIIDNQGIAFPLADLATQIDAARLLTWRASWMAANG------VSFERGEGSMSKLAASE 346

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A      A++ +GG GYI +  + + YR++   +I  G+     + + N L
Sbjct: 347 IAVKATERAIQTMGGWGYITDHPVEKWYRDAKLYTIFEGTSEIQRMVISNAL 398


>gi|218783094|ref|YP_002434412.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764478|gb|ACL06944.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 414

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 80/423 (18%), Positives = 148/423 (34%), Gaps = 35/423 (8%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A++ AR      P+           DK++F       L+ +    L      + +    R
Sbjct: 13  ARDEAREFVKTIPRQMILDMDA---DKIKFP---KEFLQEAGRRNLLGVRHPKEWGG--R 64

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTPRVHKDWAPKIFSREYDPT 186
             +    AA +  +  L      +  V +      + L  T    + +            
Sbjct: 65  GMSWAGSAAVVEEIGTLGYIFSCTFGVGADLVCDAICLHGTDEQKEKYVK---------- 114

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+    +     LTE RGG+D    T+      D        ++ + +  +D F++ 
Sbjct: 115 ---PLLAGDIFAAECLTEPRGGSDFFGATTTAVDKGDHFILNGQKRFIVGAEGADYFLVY 171

Query: 247 AQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
           A+          +  L+ D  P G+  + L   +G R      + F +        +   
Sbjct: 172 AKTNPDAKPQESLSCLIVDRGP-GVNVEYLYGLMGCRGGGAGRIVFKDVKVPKENVVGKV 230

Query: 306 TGP---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
            G       M I   L +A M++   R +L  A  Y  RR   G  + +   +   IA+ 
Sbjct: 231 HGAYPVFTTMMIPERLGTAAMTIGSARPALDVATGYTTRRKAFGQTINNFQGVNFQIAEA 290

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ + A  +L +    S D A      A   R M   TK +  +    V+  AM+ +GG 
Sbjct: 291 AMLLDACRSLVYTTGRSADIA----PYAGQTRRMVSETKKFVTESCQKVVHNAMQVMGGI 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           GY     + R YR+    +I  GS   M + + +   K  + F+   + + +D+    ++
Sbjct: 347 GYTNVFPVERMYRDLRLATIWTGSNEVMSMVIAHEWYK--DFFKSKQANIVRDMELDAEE 404

Query: 483 VIT 485
              
Sbjct: 405 AEA 407


>gi|299134538|ref|ZP_07027730.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298590348|gb|EFI50551.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 407

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 131/367 (35%), Gaps = 33/367 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +++     G   +  D      +   ++ +       +       L   +  S   + 
Sbjct: 68  RTVMKEMADLGFLGATIDGYGCAGISYVSYGLIMREFERVDTSFRSALGVQTTLSMVPIY 127

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + P              M K  +    GLTE   G+D  ++ ++ +K+  
Sbjct: 128 AYGSEAQRDKYLP-------------AMAKGEILGCFGLTEPDHGSDPGSMKTRAKKVPG 174

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G     G  W   +P++D  ++ A+ +  V    +   + +    GL   +++NK   R+
Sbjct: 175 GYRLTGGKTWITHAPIADIMVVWAKDDQDV----IRGFILERGMAGLSTAKIENKFSVRA 230

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T ++   + F     + N+  G          L++A   +    +  AE   +A R  
Sbjct: 231 SPTGQIFMEDVFVP---EENLLPGVQGLKGPFGCLNNARFGIIWGAMGAAEFCWHAARQY 287

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I+        ++   D  K+  E       M  
Sbjct: 288 SMDRKQFGRPLAANQLIQKKLADMQTEISIGLLACLHVSRLRDAGKATPE-------MLS 340

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K  C   A  +   A +  GG+G  +E  + RH       + L G+ +   L VL   
Sbjct: 341 LLKRNCAGKALDIARAARDIHGGNGISDEYHVIRHLMNLETVNTLEGTHDIHAL-VLGRA 399

Query: 459 EKGTNLF 465
           + G + F
Sbjct: 400 QTGISAF 406


>gi|294932523|ref|XP_002780315.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239890237|gb|EER12110.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 905

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 93/495 (18%), Positives = 166/495 (33%), Gaps = 58/495 (11%)

Query: 9   RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSC 68
              + Q  +   +         F   N Y       +  + +    HK L      ++  
Sbjct: 1   MSMIQQAKRMGVNTEVFGDASPFGDPNWY------QSYNSPYYDDSHKRLRAFMRTLVEE 54

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDK-VEFHPAWHALLRRS---IHDGLHCSIWDRSF 124
                               P    WD+ +E     H +L +S   +    H    +   
Sbjct: 55  KLM-----------------PHVHEWDENLEIPREVHKMLGQSGINVLAMGHPYPVEYQS 97

Query: 125 EPVVRKQAHKIRAARLYLMAQLE-------AGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
            P V K         L L  +L        A  L+         V       +     P+
Sbjct: 98  PPDVLKGVPLDTFHELVLSDELARAGSGGLAWGLVGGLTIGLPPVLRFGPKAMRDRIVPE 157

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236
             S E               I L +TE   G+D+A I    +K S G  Y ++G K +++
Sbjct: 158 CLSGE-------------KIICLAITEPTAGSDVANIRCSAKKSSCGKYYIVNGEKKWIT 204

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           + +   +  +A   G  G   +  LL + +  G+  +R+K   G  S+ T  + F +   
Sbjct: 205 NGIWADYFTVAVRTGGPGMDGISLLLIEKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKV 263

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G  N     +        L    ++    RV   EA+ +A +R   G  L+  P
Sbjct: 264 PIENLIGKENKGFKCIMHNFNHERLALCALTNRFARVCYEEALKHANKRKTFGKTLVQHP 323

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVI 412
           V++  + ++A  I A  A   ++A           EA      +  + K  C K+     
Sbjct: 324 VIRFKLGEMARQIEATHAWVEQVAYQV--GTMHPLEANMKLGGVTALLKVQCTKVFEYCA 381

Query: 413 AEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            E+ +  GG  Y        + R  RE  A ++  GS   M+   +  + K   + + L 
Sbjct: 382 RESAQIFGGLSYSRGGVGEKVERLNREVRAMAVPGGSEEIMLDLGVKQMSKLAEMAKVLV 441

Query: 470 STLEQDLGSSGKKVI 484
              EQ+  ++ K++ 
Sbjct: 442 EQAEQENAANKKQMA 456



 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 135/394 (34%), Gaps = 19/394 (4%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS----IWDRSFEPVVRKQAHKIRAARLYLMA 144
           P    WD+    P    + RR    GL        +   +  + +            L+ 
Sbjct: 509 PHVFEWDENLEIP--REVHRRMGALGLTSLAMGHPYPVQYGGIPKFLEGVKIDVFHELIV 566

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
             E     S  V    +  L         + PK       P            I L +TE
Sbjct: 567 SDELCRCGSGGVAWGLVGGLTIGLPPVLRFGPKAMRDRIVPE----CLSGEKIICLAITE 622

Query: 205 KRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A I    +K S G  Y ++G K ++++ +   +  +A   G  G   +  LL 
Sbjct: 623 PTAGSDVANIRCSAKKSSCGKYYIVNGEKKWITNGIWADYFTVAVRTGGPGMDGISLLLI 682

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + +  G+  +R+K   G  S+ T  + F +       L+G  N     +           
Sbjct: 683 EKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKVPIENLIGKENKGFKCIMHNFNHERFAL 741

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              +    RV   EA+ +A RR   G  LI   V++  +A+++  I A  A    +A   
Sbjct: 742 CAQTNRFARVCYEEALKHAHRRKTFGKPLIQHQVIRWKLAEMSRLIEATHAWLENVAYQL 801

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRES 437
                  E       +  + K  C K+      E+ +  GG  Y        + R  RE 
Sbjct: 802 STMHP-LEANMKLGGVTALLKVQCTKVFEYCARESAQIFGGLSYSRGGVGEKVERLNREV 860

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            A ++  GS   M+   +  + K   + + L + 
Sbjct: 861 RAMAVPGGSEEIMLDLGVRQMRKLAEMAKTLVAE 894


>gi|126739718|ref|ZP_01755410.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126719364|gb|EBA16074.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 561

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 139/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A  +  +       +  G L + S  +A ++  
Sbjct: 212 EVIEELAEMGVFGLTIPEEYGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     +W PKI S E  PT                TE   G+D+ ++ ++  K  +G
Sbjct: 272 GGTEEQKANWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDENG 318

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 319 DYKITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKAPGTDEQPFPTEGMTGG 378

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G+ N     + +      + +A  ++   +
Sbjct: 379 EIE-VLGYRGMKEYELGFDGFHVKGENLLGGEENKGFKQLMETFESARIQTAARAIGVAQ 437

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D       E
Sbjct: 438 SALDIGMQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMVARQLTYFSAWEKDNGHRCDLE 497

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 498 AGMAKLL-------GARVAWAAADNGLQIHGGNGFAMEYKISRVLCDARILNIFEGAAEI 550

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 551 QAQVIARRL 559


>gi|332090835|gb|EGI95927.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           5216-82]
          Length = 382

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|170739921|ref|YP_001768576.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168194195|gb|ACA16142.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 415

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 129/363 (35%), Gaps = 38/363 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL        +        A+ + A  +  +       +   S      +        
Sbjct: 81  ELGLLGVTLPEEYGCAGASYVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGDEAQ 140

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + PK+ + E+                 GLTE   G+D A + ++ +KI  G      
Sbjct: 141 RRTYLPKLATGEF-------------VGCFGLTEPDAGSDPAGMRTRAEKIDGGYRLSGA 187

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  ++P++D F++ A+         +   + +    GL   ++K K+  R++ T E+ 
Sbjct: 188 KTWISNAPIADVFVVWAKSPAHD--NQIRGFVLEKGMKGLSAPKIKGKLSLRASVTGEIV 245

Query: 291 FSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
                     LL  ++   GP         L+ A   +S   +  AE     A  Y   R
Sbjct: 246 MDGVEVPESALLPHVSGLKGP------FGCLNRARYGISWGALGAAEDCWHRARQYTLDR 299

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    +++R +AD+  +IA     S R+   FDE +        A  M  I K 
Sbjct: 300 TQFGRPLAQTQLVQRKLADMQTEIALGLQASLRVGRLFDEGRV-------APEMISIVKR 352

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             C  A  +   A +  GG+G + E  + RH +     +   G+ +   L +L   + G 
Sbjct: 353 NNCGKALEIARTARDMHGGNGIMGEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTGL 411

Query: 463 NLF 465
             F
Sbjct: 412 QAF 414


>gi|110641816|ref|YP_669546.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|170684026|ref|YP_001743559.1| putative acyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|191167836|ref|ZP_03029641.1| acyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|191171725|ref|ZP_03033272.1| acyl-CoA dehydrogenase [Escherichia coli F11]
 gi|193065248|ref|ZP_03046320.1| acyl-CoA dehydrogenase [Escherichia coli E22]
 gi|227885885|ref|ZP_04003690.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|300818332|ref|ZP_07098542.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           107-1]
 gi|300821432|ref|ZP_07101579.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           119-7]
 gi|300924730|ref|ZP_07140676.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           182-1]
 gi|300951287|ref|ZP_07165136.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           116-1]
 gi|300958576|ref|ZP_07170706.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           175-1]
 gi|300987755|ref|ZP_07178333.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           200-1]
 gi|301050974|ref|ZP_07197820.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           185-1]
 gi|301307301|ref|ZP_07213314.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           124-1]
 gi|309793463|ref|ZP_07687890.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           145-7]
 gi|110343408|gb|ABG69645.1| hypothetical protein YdiO (putative acyl-CoA dehydrogenase)
           [Escherichia coli 536]
 gi|170521744|gb|ACB19922.1| acyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|190902095|gb|EDV61839.1| acyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|190908055|gb|EDV67647.1| acyl-CoA dehydrogenase [Escherichia coli F11]
 gi|192927042|gb|EDV81664.1| acyl-CoA dehydrogenase [Escherichia coli E22]
 gi|227837458|gb|EEJ47924.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|294493538|gb|ADE92294.1| acyl-CoA dehydrogenase [Escherichia coli IHE3034]
 gi|300297351|gb|EFJ53736.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           185-1]
 gi|300306043|gb|EFJ60563.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           200-1]
 gi|300314785|gb|EFJ64569.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           175-1]
 gi|300419108|gb|EFK02419.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           182-1]
 gi|300449468|gb|EFK13088.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           116-1]
 gi|300525935|gb|EFK47004.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           119-7]
 gi|300528972|gb|EFK50034.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           107-1]
 gi|300837512|gb|EFK65272.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           124-1]
 gi|307553716|gb|ADN46491.1| putative acyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|308123050|gb|EFO60312.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           145-7]
 gi|315257502|gb|EFU37470.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           85-1]
 gi|315286379|gb|EFU45815.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           110-3]
 gi|315290542|gb|EFU49916.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           153-1]
 gi|320195410|gb|EFW70035.1| Acyl-CoA dehydrogenase [Escherichia coli WV_060327]
 gi|320197877|gb|EFW72485.1| Acyl-CoA dehydrogenase [Escherichia coli EC4100B]
 gi|323952202|gb|EGB48075.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|324007035|gb|EGB76254.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           57-2]
 gi|324011440|gb|EGB80659.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           60-1]
 gi|324016525|gb|EGB85744.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           117-3]
 gi|324119179|gb|EGC13067.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
          Length = 384

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|81241187|gb|ABB61897.1| putative oxidoreductase [Shigella dysenteriae Sd197]
          Length = 401

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPDAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D  +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADLHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|226361952|ref|YP_002779730.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240437|dbj|BAH50785.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 389

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 115/361 (31%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             + R +   G         F    V         A         +  +   +       
Sbjct: 48  RKVFREAGDLGFLGMEIPEEFGGGGVSDFRFNAVIAEEIARTGTVSVGINLHNDICVPYF 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K W P + S E             +   + +TE   G+D+A I +      
Sbjct: 108 LAYANDDQRKRWLPGLASGE-------------LIAAIAMTEPGTGSDLAGIGTTATLDG 154

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           D  Y L+G K F+S+   +D  I+ A+ +        +  ++ +    G    R   KIG
Sbjct: 155 DH-YVLNGSKTFISNGHNADLVIVAARTDRDADRHGGLSLIVVERDTPGFERGRNLEKIG 213

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T EL F N        L  +      +        +  A+ SV+    +L  A+ 
Sbjct: 214 MHAQDTAELFFDNARVPAANVLGKAGSGFRSLVSNLAQERMTIAVASVASAAQALDWAVG 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R V G  +      +  +A I  ++    A                E AA A++ A
Sbjct: 274 YVKERRVFGRSVGSYQNTRFVLASIKTEVEVMQAFVDGCVRELVAGTLTPERAAMAKLAA 333

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   ++        ++  GG GY+ E  IAR Y ++    I  G+   M   +   
Sbjct: 334 -------SELQGTATDRCLQLFGGYGYMTEYPIARAYVDARIGRIYGGTSEVMREIIGRS 386

Query: 458 L 458
           +
Sbjct: 387 M 387


>gi|126461086|ref|YP_001042200.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
 gi|126102750|gb|ABN75428.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
          Length = 555

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 133/371 (35%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 207 EIVEALAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 266

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 267 GGTDAQKAAWLPKLASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKDGDE 313

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 314 WVVNGNKTWITHAARTHVMTLLARTDPETTDYRGLSMFLAEKMPGTDADPFPTPGMTGGE 373

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           ++  +G R     E+ F    GF +   N+  G   +  K L+       + +A  ++  
Sbjct: 374 IE-VLGYRGMKEYEIGFD---GFRVKGENLLGGVEGQGFKQLMQTFESARIQTAARAIGV 429

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +   
Sbjct: 430 AQNALEVGMQYAEERKQFGKALIEFPRVAGKLAMMAVEIMVARQLTYHSAWEKDHGQRCD 489

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+ 
Sbjct: 490 LEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYQISRILCDARILNIFEGAA 542

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 543 EIQAQVIARRL 553


>gi|159900483|ref|YP_001546730.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893522|gb|ABX06602.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 376

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 134/372 (36%), Gaps = 32/372 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +++D+ E  PA  A++++   +G    +                             
Sbjct: 26  PYADQFDREERVPA--AVIQKLAREGYLGQVVPEEQGGTGSDMVTFGILNEELGRGCSSI 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L++    +A  V    +      +  ++ S E             +     L+E   G
Sbjct: 84  RSLLTVHSMAAFAVLKWGSADHKSRFLSRLVSGE-------------IIGAFALSEPNVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  ++ +  + + D        +W     ++D F++ AQVEG+     V   L + +  
Sbjct: 131 SDAKSVETSARLVGDRYVLNGRKRWMTFGQIADVFLLFAQVEGK-----VTAFLVERNSP 185

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G   + +   +G R +   EL   +        L    G          LD    SV+  
Sbjct: 186 GFSTEPITGILGTRGSMLAELRLDDCEIPKENRLG-GLGFGLAAIGTSALDIGRYSVAWG 244

Query: 329 RVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V +A+A       Y   R   G  + D  ++++ + ++  +  AA  L ++     D  
Sbjct: 245 SVGIAQACLEACVEYTSTRRQFGVPIKDHDLVRQMMTNMITNTKAARMLCYQAGYLKDSG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            SR+       +   I KY+    A  + A+A++  G +G  EE  + R++R++    I+
Sbjct: 305 DSRT------VMETWIAKYFASTAAMKIAADAVQLHGANGCSEEYPVQRYFRDAKIMEII 358

Query: 444 LGSGNAMVLDVL 455
             S     +++ 
Sbjct: 359 EASTQLQQMNIA 370


>gi|126735560|ref|ZP_01751305.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
 gi|126714747|gb|EBA11613.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2]
          Length = 407

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 133/393 (33%), Gaps = 44/393 (11%)

Query: 88  GPGGERWDKVEFHPAWHA------LLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARL 140
               +   +     A+        +  +    GL        +  +      + + A  +
Sbjct: 43  NTFAQDVLQPRVTDAYREETVDPDVFAQMGAAGLLGLTIPEEYGGLGAGYVTYGLVAREI 102

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S      +    +      + P +                ++    
Sbjct: 103 ERVDSGYRSMMSVQSSLVMYPIHAYGSDAQRAKYLPGL-------------AAGTLIGCF 149

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           GLTE   G+D A + +  +K  DG        W  ++P++D F++ A+ +   G   +  
Sbjct: 150 GLTEPDAGSDPAGMKTTAKKTEDGYIINGSKMWISNAPIADVFVIWAKSDAHDGK--IRG 207

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIY 317
            + D    GL   ++  K+  R++ T E+   N       LL  +    GP         
Sbjct: 208 FVLDKGMQGLSAPKVGGKLSLRASVTGEIVMDNVAVSEDALLPGVQGLKGP------FGC 261

Query: 318 LDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+ A   ++   +  AEA  +A R     R      L    + ++ +AD+  +IA  T  
Sbjct: 262 LNRARYGIAWGVMGAAEACWHAARQYGLDRKQFNKPLAQTQLFQKKLADMQTEIALGTQS 321

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + +L    ++ K+       A  M  + K   C  A  +   + +  GG+G  E+  I R
Sbjct: 322 ALQLGRLMEQGKA-------APEMISLMKRNNCGKALDIARASRDMHGGNGISEDFQIMR 374

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           H       +   G+ +   L +L   + G   F
Sbjct: 375 HMINLETVNTYEGTHDVHAL-ILGRAQTGLQAF 406


>gi|300930835|ref|ZP_07146205.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           187-1]
 gi|300461310|gb|EFK24803.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           187-1]
          Length = 384

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 139/362 (38%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +              ++AQ+E     +P    A ++ 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGIPADYV-------TQMLAQMEVSKCGAP----AFLIT 89

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +     + +   T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 90  NGQCIHSMRRFGS---AEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|163855517|ref|YP_001629815.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259245|emb|CAP41545.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 384

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 143/370 (38%), Gaps = 31/370 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAARLYLMAQLEAGHLM 152
           D+    P            G      +R +       K          Y  AQL + +L 
Sbjct: 38  DEARQFPI--EAYMALAEAGWIGLPHEREYGGSEGSCKDLAIFVETVSYHNAQLASAYLT 95

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + ++     V    +  V  +  PK+ S              ++ + L +TE   G+D+A
Sbjct: 96  T-AIYGGMQVKYGASAEVKAEILPKLVSG-------------ALRLALCITEPATGSDVA 141

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLC 271
           +I+++  +  D  Y +SG K +++      ++++A +         +   L D    G+ 
Sbjct: 142 SISTRAVQDGDD-YLISGQKVYITCAHMADYLVVATKTNPDARHKGITLFLVDAHAPGVA 200

Query: 272 YQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            + LK  +G R   T E+ F +       +LG+LN     +     +  L  A  +   M
Sbjct: 201 VRPLKG-LGRRMIHTNEVFFDDVRVSSARMLGELNGGWRALMRGLNIERLCLAAAACGNM 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + +A  +A +R   G  +     +    AD+ +   +A  ++  +A   D  ++ + 
Sbjct: 260 MRIIDDARDFATQRAQFGNPISSYQAIAHKFADMQIMATSARVMTLHVAEMLDAGQTPTM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E A A++ A  +   C  M        M+ +GG+GY+ E  +  ++R++   +I  G+  
Sbjct: 320 ETAIAKVQATESNSRCADMG-------MQIMGGAGYMMEHPMQMYFRDARVGTIGGGTSE 372

Query: 449 AMVLDVLNLL 458
            M   +   +
Sbjct: 373 IMRSIIAKQM 382


>gi|111225416|ref|YP_716210.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111152948|emb|CAJ64696.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 413

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 126/376 (33%), Gaps = 47/376 (12%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL        +  +                  +    +++     A ++    +    
Sbjct: 52  EMGLFGITIPEQYGGLGESLLTYALVVEEIARGWMSVAGVVNTHFIVAYLIGRHGSAEQR 111

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI------ 225
               P++ + E             +     ++E   G+D+AAITS+  + + G       
Sbjct: 112 SRLLPRMATGE-------------LRGAFSMSEPGCGSDVAAITSRADRKAGGGRNGEGE 158

Query: 226 -------YCLSGHKWFLSSPMSDAFI-MLAQVEGRV-------GCFLVPRLLEDGSPNGL 270
                  Y L+G K +L++      +  L + +            FL+ +    G+  G+
Sbjct: 159 GDGDGDVYVLNGQKMWLTNGARAGIVATLVKTDEGAESVYRNMTTFLLEKEPGFGTHGGI 218

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMS 324
                 +K+G +   T E+  ++        L    G  +    ++       ++ A  +
Sbjct: 219 TIPGSIDKLGYKGIETTEMILTDHRVPAASILGGDDGRGQGFYQMMDGVEVGRVNVAARA 278

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              M  +   AI YA+ R   G  + +   +   +A++A  + A   +    A   D  +
Sbjct: 279 CGIMIRAFELAIAYAQTRRAFGRPIAEHQAIAFKLAEMATKVEAGHLMMVSAARKKDSGQ 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               EA  A+ +A        +    V  EA    GG GY +E  I R YRE+P   I  
Sbjct: 339 RNDVEAGMAKYLA-------SEYCHEVTTEAFRIHGGYGYSKEYEIERLYREAPFMLIGE 391

Query: 445 GSGNAMVLDVLNLLEK 460
           G+       +   L +
Sbjct: 392 GTSEIQKRIISRALLR 407


>gi|254719151|ref|ZP_05180962.1| glutaryl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|265984146|ref|ZP_06096881.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306838143|ref|ZP_07470999.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653]
 gi|306841812|ref|ZP_07474495.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|264662738|gb|EEZ32999.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           83/13]
 gi|306288093|gb|EFM59487.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2]
 gi|306406733|gb|EFM62956.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653]
          Length = 394

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 129/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 53  ELFRLMGQAGLLGVTLPEDYGAANASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIY 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S E             +    GLTE   G+D A + ++ +KI  
Sbjct: 113 AYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGMKTRAEKIDG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+         +   + +    GL   ++  K+  R+
Sbjct: 160 GYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPKIGGKLSLRA 217

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+           +L +++   GP         L+ A   +S   +  AE     A
Sbjct: 218 SITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLGAAEDCWFRA 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R      L    + ++ +AD+  +IA     S R+   FDE K        A  
Sbjct: 272 RQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-------MAPE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 325 MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGIQAF 393


>gi|331647186|ref|ZP_08348280.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
 gi|331043969|gb|EGI16105.1| putative acyl-CoA dehydrogenase [Escherichia coli M605]
          Length = 401

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 58  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMELSKCGAPAFLITNGQCIHSMR 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 116 RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 162

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 163 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 221

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 222 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 282 ANQRIAFGKPIGHNQMIQEKLALMAIKIGNMRNMVLKVAWQADQHQSLRTSAALA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 337 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 394

Query: 459 EK 460
            K
Sbjct: 395 LK 396


>gi|326403766|ref|YP_004283848.1| putative acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
 gi|325050628|dbj|BAJ80966.1| putative acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301]
          Length = 599

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 92/543 (16%), Positives = 180/543 (33%), Gaps = 77/543 (14%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGERW-- 94
             D +L  L+     + H           +       ++A  +  P          R+  
Sbjct: 9   DLDFILFDLLGMEELLRHPHFAAFDRDACTQMLDTAQQIAEDHFLPIAAEVDANEPRFVG 68

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +VE        LR     G     + +    +   +     A+ ++  A     +    
Sbjct: 69  GRVEMPEGTGHALRACAEAGFFALPFAQEHGGLQAPRVLHTAASGIFTCANTAVANYAFL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++A   +  + + + P +    +  T             + L+E + G+ +A I
Sbjct: 129 TVGAANLLAAFGSEPLRRRFLPPMLEGRWFGT-------------MCLSEPQAGSSLADI 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+     +DG + L G K ++S    +       ++LA++ G       +  FLVP+   
Sbjct: 176 TTTATPRADGTFSLRGSKMWISGGDQEISENIVHMVLARIAGAPAGTRGISLFLVPKRRV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           D     G  N +    L +K+G R      L F     T G L+G  +     +  M   
Sbjct: 236 DESGAVGESNNIALAGLNHKMGQRGTTNCLLNFGESGETIGHLIGAPHRGLEYMFQMMNE 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIAL 364
             +     +          +  YAR R                 +++   ++R +     
Sbjct: 296 ARIGVGHAATMSALAGYRHSADYARTRTQGRRAGQKDPSAPPVPIVEHADIRRMLLAQKA 355

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +  A AL    A   D      +A  ++   A   ++ P+ K W  +        AM+ 
Sbjct: 356 AVEGAQALCLYAAQLVDRQEIATDADEKAWLGALLGLLTPVVKSWPSEHCLEANKWAMQI 415

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +GG GY  +  + R YR++  N I  G+     +D++     G             D G 
Sbjct: 416 LGGYGYTRDYPLERLYRDNRLNHIHEGTFGIQGIDLVGRKLGG-------------DKGD 462

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIA-----------LASSAAALYRAGMNDIA- 526
           + ++    +R++ +       LA      +A           L + A    R     +  
Sbjct: 463 ALRRFAAQMRETAATAARQPALANEAARLVAALDQLGVTADTLLACADLPRRLANATVFL 522

Query: 527 DVF 529
           D F
Sbjct: 523 DAF 525


>gi|226304619|ref|YP_002764577.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183734|dbj|BAH31838.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 611

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/511 (18%), Positives = 187/511 (36%), Gaps = 71/511 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       V    ++    +       +      
Sbjct: 46  ARLAEGPLGESFADADRNPPV---FDPETH---TVALPESFKKSFKALWDAEWYRMGLSE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               V   ++       L L AQ  A H+       A ++    T    K WA  I  R 
Sbjct: 100 EVGGVPVPRSVVWAIGELILGAQPAA-HMYQAGPAFADVLFNNGTEEQKK-WAATIVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S  SD 
Sbjct: 158 WGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSDD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+        E G  NG+    +++K+G + +
Sbjct: 205 LFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFVTNVEHKMGLKVS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           AT E+ F        G+L+G+++     + D+     +     +++ +      A+ YA+
Sbjct: 265 ATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALDYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------ 382
           +R                  +   P ++R++A          A+    A   DE      
Sbjct: 325 QRVQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLYTAAHQDEVVAQLV 384

Query: 383 -AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +        ++ PI K    + A   + ++++ +GGSG++++  I ++ R+S  +S
Sbjct: 385 SGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDYPIEQYIRDSKIDS 444

Query: 442 ILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  G+      D        ++G  L     Q+ + ++ + G+   K    L    +  +
Sbjct: 445 LYEGTTAIQAQDFFFRKIARDRGVALAHVAGQIKTFIDSEAGNGRLKAERAL--LATALE 502

Query: 496 EDKGLARFLTEK-IALASSAAALYRAGMNDI 525
           + + +A  LT   +        LY+ G+  +
Sbjct: 503 DVQAMAATLTGFLMGAQEQPTELYKVGLGSV 533


>gi|170062286|ref|XP_001866602.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
 gi|167880244|gb|EDS43627.1| acyl-coa dehydrogenase [Culex quinquefasciatus]
          Length = 502

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 78/439 (17%), Positives = 162/439 (36%), Gaps = 65/439 (14%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ----LEAGHLMSPSVTSAS 160
             +      G+        +  +       ++AARL  +        + H  +       
Sbjct: 88  RTMDAMWELGVMGYGTPVEYGGLGLT---NVQAARLNDITGGFDLALSIHAGAHQSIGTK 144

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            + L  + +  + + P++ +               V     LTE   G+D A++ S+   
Sbjct: 145 GIILYGSVQQKEKYLPQLATG-------------KVFGAFALTEPSVGSDAASVKSRAVL 191

Query: 221 ISDG-IYCLSGHKWFLSSP-MSDAFIMLAQV---EGRVGCFL--VPRLLEDGSPNGLCYQ 273
              G  Y L+G K + S   ++D F   AQ    +   G     +   + +    G+   
Sbjct: 192 SPCGKYYILNGTKIWCSGGGIADIFTTFAQTEVVDPETGEKRDKMTAFIVERGFGGVSSG 251

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM---- 328
             ++K+G + + T ++ F +    +    NV        K+ +  L+S    ++ M    
Sbjct: 252 TPESKMGLKCSVTTDVYFDDVKVPV---ENVLGEVGNGFKVAVNILNSGRFGLAAMLSGT 308

Query: 329 -RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R  + +A  +   R      L D   ++  +A +A+    A  L+F ++ + D+  +  
Sbjct: 309 MRACIQKAAEHVTTRVQFKRKLKDFENVQEKLARMAMHHYVAQTLTFMVSGNMDKGSTE- 367

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  + A ITK +  +    V  EA++ +GG+GY++   + +  R+     I  G+ 
Sbjct: 368 -----YHLEAAITKVFGTEAGWYVCDEAIQLLGGNGYMKATGLEQFMRDMRVFRIFEGAN 422

Query: 448 NAMVLDV-----------LNLLEKG--------TNLFEQLFSTLEQDLGSSG----KKVI 484
           + + L +           L  L+K           + ++    + + +GS G    + V 
Sbjct: 423 DVLRLFIALTGIQFAGQQLKGLQKALKSPFMNMGIILQEGSKRISRSIGSGGTNLEQFVA 482

Query: 485 TILRDSISLCKEDKGLARF 503
             L+DS  LC +     RF
Sbjct: 483 DPLKDSAKLCSQVSNHHRF 501


>gi|260185266|ref|ZP_05762740.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445938|ref|ZP_06435682.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
 gi|289418896|gb|EFD16097.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CPHL_A]
          Length = 395

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 139/424 (32%), Gaps = 38/424 (8%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P  +   L    E  +  T +     A + TP + A+   G+        P   
Sbjct: 8   ALDRDDPLGLDASLSSD-EIAVRDTVRRF--CAEHVTPHVAAWFEDGDL-------PVAR 57

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    GL                 + +    L          +      +   +A 
Sbjct: 58  DLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIAS 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + +               +    GLTE   G+D AA+ ++ ++    
Sbjct: 118 FGSDEQKRQWLPGMATG-------------GLLGCFGLTEPDVGSDPAAMKTRARRDGPD 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                G  W  +  ++D  I+ A  +  +  F+VP         G     + +K+  R++
Sbjct: 165 WVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPT-----DTPGFTANTIGHKLSLRAS 219

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            T EL   N        L  +TG    +  L          ++   R +   A+ YAR+R
Sbjct: 220 ITSELVLDNVRLPADAMLPGATGLRAPLACLSEARYGIVWGAMGAARSAWQCALDYARQR 279

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + +  + D+A+++     LS  L    D    R ++ ++        K 
Sbjct: 280 TQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFG-------KL 332

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              + A  +   A   +GG+G   E  + RH     +     G+   M   VL     G 
Sbjct: 333 NNTREALKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGL 391

Query: 463 NLFE 466
             F 
Sbjct: 392 AAFR 395


>gi|119610655|gb|EAW90249.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_d [Homo
           sapiens]
          Length = 458

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 140/358 (39%), Gaps = 41/358 (11%)

Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLC 271
            ++     Y L+G K W  +  ++D F + A+    +   G     +   + +    G+ 
Sbjct: 36  ARRPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGIT 95

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRV 330
           +   + K+G +++ T E+ F           NV        K+ ++ L++    ++    
Sbjct: 96  HGPPEKKMGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALA 152

Query: 331 S-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 +A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+   
Sbjct: 153 GTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG-- 210

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               A   +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G
Sbjct: 211 ----ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEG 266

Query: 446 SGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL------- 493
           + + + L V     ++KG  L   L S L+   G++G    +    LR    L       
Sbjct: 267 TNDILRLFVALQGCMDKGKELSG-LGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLS 325

Query: 494 ------CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                       LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 326 GLVHPELSRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 382


>gi|323968463|gb|EGB63869.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
          Length = 384

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 137/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  E +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+  +N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLNNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|46201506|ref|ZP_00054900.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 553

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 125/373 (33%), Gaps = 35/373 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +  +   +              +  G L + S  +  ++ L
Sbjct: 201 EVVDHVAEMGVFGLTLPEEYGGLGLGKMSMCVVTEELSRGYIGVGSLGTRSEIAGELIRL 260

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    ++W PKI S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 261 GGTEEQKQEWLPKIASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKQGDE 307

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +D   +L +          +  ++               G+    
Sbjct: 308 YVVTGNKTWITHAARTDVMTLLVRTNPDTKDWKGLSMMIAPKPRGTEANPFPAEGMTGGE 367

Query: 275 LKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +K  +G R     EL F          L G        + +      + +A  +V   + 
Sbjct: 368 IK-VLGYRGMKEYELGFDGFKVPAANLLGGVEGQGFKQLMETFESARIQTAARAVGVAQC 426

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++   + YA  R   G  +   P +   IA +A++   A  L++  A   DE      EA
Sbjct: 427 AMEVGLKYANERVQFGKPIYQFPRVGGKIAWMAVETMIARQLTYFSAREKDEGHRCDIEA 486

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++A        ++A A    A++  GG+GY EE  I+R   ++   +I  G+    
Sbjct: 487 GMAKLLAA-------RVAWANADNALQVHGGNGYAEEYPISRILCDARILNIFEGAAEIQ 539

Query: 451 VLDVLNLLEKGTN 463
              +   L  G  
Sbjct: 540 AQVIARGLLSGAR 552


>gi|332560105|ref|ZP_08414427.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332277817|gb|EGJ23132.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 555

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 133/371 (35%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 207 EIVEALAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 266

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 267 GGTDAQKAAWLPKLASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKDGDE 313

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 314 WVVNGNKTWITHAARTHVMTLLARTDPETTDYRGLSMFLAEKMPGTDADPFPTPGMTGGE 373

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           ++  +G R     E+ F    GF +   N+  G   +  K L+       + +A  ++  
Sbjct: 374 IE-VLGYRGMKEYEIGFD---GFRVKGENLLGGVEGQGFKQLMQTFESARIQTAARAIGV 429

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +   
Sbjct: 430 AQNALEVGMQYAEERKQFGKALIEFPRVAGKLAMMAVEIMVARQLTYHSAWEKDHGQRCD 489

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+ 
Sbjct: 490 LEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYQISRILCDARILNIFEGAA 542

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 543 EIQAQVIARRL 553


>gi|75674806|ref|YP_317227.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gi|74419676|gb|ABA03875.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 404

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 124/361 (34%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +       GL+     + +        A+ + A  +  +           S      +
Sbjct: 62  REIFNEMGELGLNGITLPQEYGCADASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPI 121

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P++ + E+                 GLTE   G+D   + S+ +K+S
Sbjct: 122 YAYGDENQRKKYLPRLATGEW-------------VGCFGLTEPDAGSDPGGMKSRAEKVS 168

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W  ++P++D F++ A+         +   + +    GL   ++  K+  R
Sbjct: 169 DGYRLTGSKTWISNAPIADLFVVWARS--AAHDNQIRGFVLEKGMKGLSAPKIGGKLSLR 226

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T E+        ++ + N+             L+ A   +S   +  AE     A  
Sbjct: 227 ASVTGEIVMDGV---VVPEENLLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCMHRART 283

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD+  DIA     + R+    DE +           M 
Sbjct: 284 YVLERKQFGRPLAAAQLVQKKLADMQTDIALGLQATLRIGRLMDEGR-------MTPEMI 336

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   A +  GG+G   E  + RH     A +   G+ +   L +   
Sbjct: 337 SIIKRNNCGKALDIARAARDMHGGNGIQIEYHVMRHAANLEAVNTYEGTHDVHALVLGRA 396

Query: 458 L 458
           +
Sbjct: 397 I 397


>gi|161984945|ref|YP_407885.2| acyl-CoA dehydrogenase [Shigella boydii Sb227]
 gi|187733125|ref|YP_001880455.1| putative acyl-CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|187430117|gb|ACD09391.1| acyl-CoA dehydrogenase [Shigella boydii CDC 3083-94]
 gi|320184444|gb|EFW59252.1| Acyl-CoA dehydrogenase [Shigella flexneri CDC 796-83]
 gi|332096027|gb|EGJ01032.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           3594-74]
          Length = 383

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|328868185|gb|EGG16565.1| glutaryl-CoA dehydrogenase [Dictyostelium fasciculatum]
          Length = 419

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 121/361 (33%), Gaps = 36/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+  +     +  V    A+ + A  +  +       +   S      + 
Sbjct: 83  RNIMSEYGAMGMLGATIPE-YGGVSHV-AYGLMANEVEKVDSGYRSAMSVQSSLVMHPIF 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + +   + S               +    GLTE   G+D A + ++ +K   
Sbjct: 141 TFGTSAQKQKYLDGLASG-------------QLVGCFGLTEPNAGSDPAGMQTRAKKQGG 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  +SP++D F++ A+ + G +  F++     +    GL   +++ K+  R
Sbjct: 188 KYILNGTKTWITNSPIADVFVVWAKDDNGDIRGFVL-----EKGMKGLSAPKIEGKLSLR 242

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T  +   +             G          L+ A   +    +  AE     A  
Sbjct: 243 ASITGMIVMEDVEVPAENMFPEIKGLR---GPFSCLNKARYGIGWGSLGAAEFCYSTARQ 299

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    + ++ +AD+A +I+       ++    D   +  E         
Sbjct: 300 YGLDRKQFGKPLAANQLYQKKLADMATEISLGLQACHQVGRLIDSGLATPER-------I 352

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  +  +  ++ + +GG+G  +E  + RH       +   G+ +   L +   
Sbjct: 353 SLIKRNSCGKSLDIARQSRDMLGGNGIADEYHVIRHAANLETVNTYEGTHDIHALILGRA 412

Query: 458 L 458
           +
Sbjct: 413 I 413


>gi|296167104|ref|ZP_06849514.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897546|gb|EFG77142.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 460

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 146/412 (35%), Gaps = 41/412 (9%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    +LAR  +    ++    P    +D+ +  P W  L   +   G +  ++ R    
Sbjct: 8   TAAQHDLARRTHQFAEEVIR--PVALHYDQRQEFP-WPVLEE-AAQRGFYSPLFYRDLIG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L+       G  +     + S +    +P    +WAP+ F       
Sbjct: 64  DPTGLSLPMFMEELF-WGCAGIGLAIVMPALALSAIGQAASPEQMLEWAPECFGT----- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 K      L ++E  GG+D+  + ++ ++  D         W  +  +++  ++ 
Sbjct: 118 --PGDLK---LAALAISEPEGGSDVRNLRTRARRDGDDWIIDGHKMWIGNGGIANVHVVN 172

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--- 303
           A V+  +G       +  G   GL   R  +K+G R++ T EL            L    
Sbjct: 173 AVVDEELGHRGQALFVVPGGTPGLKLVRKLDKLGCRASHTAELLLEGVRVPGANLLGGQE 232

Query: 304 ------------VSTGPVEDMKIL-----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                       V+ G       L          A  ++   R +L  A  YA  R   G
Sbjct: 233 KLEHKLAKAREVVAGGKRSGSATLGTFEQTRPMVAAQAIGIARAALEYATAYATEREAFG 292

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G +ID   +   +A++A  I AA  L++R +                     ++K    +
Sbjct: 293 GPIIDNQGIAFPLAELATQIDAARLLTWRASWMAANNVPFER------GEGSMSKMAASE 346

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A      A++ +GG GYI +  + + YR++   +I  G+     + + N L
Sbjct: 347 VAVKATERAIQTMGGWGYITDHPVEKWYRDAKLYTIFEGTSEIQRMVIANAL 398


>gi|312886279|ref|ZP_07745892.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301224|gb|EFQ78280.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 393

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/390 (19%), Positives = 140/390 (35%), Gaps = 40/390 (10%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K E  P      +R+     +  GL          PV    A     A   +M +
Sbjct: 30  ARDWVKKELSPIIEDYAQRAEFPRQLLKGLAEIGAFGPTIPVEYGGAGLDYIAYGIIMQE 89

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S  S         +    +    K + PK+ S E             +   
Sbjct: 90  IERGDSGIRSTASVQGSLVMYPIYAYGSEEQRKKYLPKLASGE-------------LMGC 136

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G++   +T+  +   D         W  ++P +D  ++ A+ EG      + 
Sbjct: 137 FGLTEPDHGSNPGGLTTNFKDAGDHYLLNGAKMWISNAPFADIAVVWAKNEGGK----IQ 192

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+ +    G       NK   R++AT EL F N       LL +++   GP+  +    
Sbjct: 193 GLIVERGMGGFTTPETHNKWSLRASATGELVFDNVKVPKDNLLPNVSGLKGPLGCL-NQA 251

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++         A+ YA+ R   G  +    + ++ +A++  +I  A  L +RL
Sbjct: 252 RYGIAWGAIGCAMDCYDTALRYAKERVQFGKPIAGFQLQQKKLAEMITEITKAQLLVWRL 311

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                E ++ + + + A+           + A  +  EA + +GG G   + SI RH   
Sbjct: 312 GVLKSENRATAAQISMAKR-------NSVETAITIAREARQILGGMGITGDYSIMRHMMN 364

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             +     G+ +  +L     +  G + F+
Sbjct: 365 LESVITYEGTHDIHLLITGMDIT-GQDAFK 393


>gi|227536311|ref|ZP_03966360.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243918|gb|EEI93933.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 449

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 135/360 (37%), Gaps = 30/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++ +     +    ++             + AA +  +    A      S  +   + 
Sbjct: 108 FEIIPKFAALNIAGYTYEGYGCAGGTSLMEGVVAAEIARVDASIATFFGVQSGLAMGSIY 167

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           +  +    ++W PK             MQK  V    GLTE   G+  A  +T+  QK  
Sbjct: 168 ICGSEEQKQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTE 214

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G       KW  +S  SD  I+ A+   +G V  F++          G   +++K K+ 
Sbjct: 215 QGWVLNGQKKWIGNSTFSDITIVWARDLDDGEVKGFII-----RKDTPGFEVEKIKGKMA 269

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
            R      +  +N        L  +    +  K+  +     A M+V   R +   A+ Y
Sbjct: 270 LRIVQNGLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDY 329

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R+R   G  +    +++  + ++  ++ A   L FRL+   D  + + E A+ A     
Sbjct: 330 TRQRKQFGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLA----- 384

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C      ++++A E +GG+G + E ++AR   ++ A     G+     L V   +
Sbjct: 385 --KVFCSLRTRDIVSKAREVMGGNGILLEYNVARFLADAEAIYSYEGTKEINSLIVGRSI 442


>gi|120611835|ref|YP_971513.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590299|gb|ABM33739.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 389

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 31/403 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW----HALLRRSIHDGLHCSIW 120
           +   T  +       +           +     +  P       AL+R     G      
Sbjct: 1   MADVTYLDWPFFEPRHAQLARDLDAWAQAHLHAQHGPDVDAECRALVRALGEGGWLRHAV 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             S   +  +    IR           A    +     +  ++L  TP     +  ++  
Sbjct: 61  GESGAAIDTRTLCLIR--ETLARHSGLADFAFAMQGLGSGAISLHGTPEQRARYLERVAR 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                   L+E   G+D+AA+    +   DG        W  +  ++
Sbjct: 119 GE-------------AIAAFALSEPEAGSDVAAMGCTARAEGDGYVLDGEKTWISNGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D +++ A+     G   +   + D    G         I         L F         
Sbjct: 166 DFYVVFARTGEAPGARGISAFIVDADAPGFSVAGRIEVIAPH--PLARLRFDGCRVPAAQ 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M+ L       A  ++   R ++ EA+  A  R + GG+L D  + + 
Sbjct: 224 RLGAPGEGFKVAMRTLDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQA 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +A  I +A  L++R A   D     + EAA A++ A        + A  VI  A++
Sbjct: 284 KLAQMATAIDSAALLTYRAAWLRDRGAVVTREAAMAKMTA-------TENAQQVIDAAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG G +  + + R YRE  A  I  G+     L +   L K
Sbjct: 337 LFGGLGVVSGQPVERLYREIRALRIYEGATEVQQLIIGRDLLK 379


>gi|300772347|ref|ZP_07082217.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300760650|gb|EFK57476.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 450

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 130/358 (36%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++ +     +    ++             + AA +  +    A      S  +   + 
Sbjct: 109 FEIIPKFAALNIAGYTYEGYGCAGGTSLMEGVVAAEIARVDASIATFFGVQSGLAMGSIY 168

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           +  +    ++W PK             MQK  V    GLTE   G+  A  +T+  QK  
Sbjct: 169 ICGSDEQKQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTE 215

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G       KW  +S  SD  I+ A+             +      G   +++K K+  R
Sbjct: 216 QGWVLNGQKKWIGNSTFSDITIVWARDLDDGEVKG---FIVRKETPGFEVEKIKGKMALR 272

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +  +N        L  +    +  K+  +     A M+V   R +   A+ Y R
Sbjct: 273 IVQNGLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDYTR 332

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +    +++  + ++  ++ A   L FRL+   D  + + E A+ A       
Sbjct: 333 QRKQFGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLA------- 385

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +C      ++++A E +GG+G + E ++AR   ++ A     G+     L V   +
Sbjct: 386 KVFCSLRTRDIVSKAREVMGGNGILLEYNVARFLADAEAIYSYEGTKEINSLIVGRSI 443


>gi|296269719|ref|YP_003652351.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296092506|gb|ADG88458.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 393

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 124/392 (31%), Gaps = 35/392 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+   P +  +   G         PA   L R     G+     +      +   ++ + 
Sbjct: 35  ADRVEPHIATWFEEGSL-------PAARELARELGRIGVLGMHLEGYGCAGMSAVSYGLA 87

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              L          +      +   +    +      W P++ + E              
Sbjct: 88  CLELEACDSGLRSLVSVQGSLAMYAIWAYGSEEQKNHWLPRMAAGE-------------A 134

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
               GLTE   G+D  ++ +  ++            W  +  ++D  ++ A+ E  +  F
Sbjct: 135 IGCFGLTEPDHGSDPGSMITTARRDGSDWILNGRKMWITNGSIADVAVVWARTEEGIRGF 194

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315
           LVP         G     +K+K+  R++ T EL   +        L  + G    +  L 
Sbjct: 195 LVPA-----GTPGFSAPEIKHKLSLRASVTSELVLDDVRLPADAILPKAEGLRAPLSCLS 249

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                    ++   R +   A+ Y++ R   G  +    + +  +AD+AL++     L+ 
Sbjct: 250 EARYGIVWGAMGAARSAFEAALEYSKTRTQFGRPIAGFQLTQAKLADMALELHKGLLLAL 309

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            L    D       + ++        K    + A  +   A   +G +G   E  + RH 
Sbjct: 310 HLGRRKDAHGLHPAQVSFG-------KLNNVREALQICRTARTILGANGISLEYPVIRHM 362

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
               +     G+     L +   L  G   F+
Sbjct: 363 TNLESVLTYEGTSEIHALVLGRALT-GIAAFQ 393


>gi|333005938|gb|EGK25454.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-272]
 gi|333018816|gb|EGK38109.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-227]
          Length = 383

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQAKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|331696949|ref|YP_004333188.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326951638|gb|AEA25335.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 413

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 139/371 (37%), Gaps = 35/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +LL      G      D     +          A     A +  G +++ +  + + VA
Sbjct: 67  RSLLAEMGELGFFGITVDTEHGGLGLGAYEYCMVAEELARAWMSVGSIIARAQGAGTGVA 126

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P    +   +  S E+                + L+E   G+D+AA++++ ++  D
Sbjct: 127 ---DPARRGELLRRSASGEW-------------IGAIALSEPDAGSDLAAVSTRAERDGD 170

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS----PNGLCYQRL 275
                   +W  ++  +D   +L +      G      +  LL +      P GL     
Sbjct: 171 EYVLTGRKRWIGNAKAADFIQVLVRTADPGPGEKRSAGLATLLVEKERDAFPKGLT-GSP 229

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
            +KIG     T ELEF       + D     G  E  + L    + +A  +V   R ++ 
Sbjct: 230 IDKIGYHGFVTWELEFDGLRVP-VADEITEGGFAETQRWLTIARVHTAARAVGLARAAVE 288

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + I Y ++R   G  + D   ++  +A +A  +  A A    +A+  D       E+A  
Sbjct: 289 DCIGYLQQRRQFGHPIGDFQAVRFTLARMAARVDQARAFYQHVAHQIDLGVPCERESAMV 348

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +++A        +MA  V  + ++  GG+GY  E  + RH+R++   +I  G+       
Sbjct: 349 KLLA-------TEMAAEVTGDGIQLHGGNGYTTEHQVERHWRDARLTTIFEGTSEIQSKI 401

Query: 454 VLNLLEKGTNL 464
           + + L   + L
Sbjct: 402 IADRLLPRSEL 412


>gi|121636157|ref|YP_976380.1| putative acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224988630|ref|YP_002643317.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121491804|emb|CAL70266.1| Probable acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224771743|dbj|BAH24549.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 611

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 95/522 (18%), Positives = 194/522 (37%), Gaps = 72/522 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
                 L  +        A+      + N P    + P       V    ++   +   +
Sbjct: 36  DTARDMLAEVSRLAEGPVAESFVE-GDRNPPV---FDPKTH---SVMLPESFKKSVNAML 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      D +   +   +A  + A   +++    A  + +     A ++  + T    
Sbjct: 89  EAGWDKVGIDEALGGMPMPKA-VVWALHEHILGANPAVWMYAGGAGFAQILYHLGTEEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R +  T             + LTE   G+D+ A  ++  + +DG + + G 
Sbjct: 148 K-WAVLAAERGWGST-------------MVLTEPDAGSDVGAARTKAVQQADGSWHIDGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQ 273
           K F++S  S         ++LA+ EG       +  + VP+ L      E G  NG+   
Sbjct: 194 KRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFDVETGEPGERNGVFVT 253

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +++K+G + +AT EL F        G+L+G+++     + ++     +     +++ + 
Sbjct: 254 NVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIEQARMMVGTKAIATLS 313

Query: 330 VSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLA 377
                A+ YA+ R                  +   P ++R++           AL    A
Sbjct: 314 TGYLNALQYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTA 373

Query: 378 NSFDEAKS---RSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              D A +      +A  A      M P+ K    + A A + E+++ +GGSG++++  I
Sbjct: 374 TFQDAAVAEVVHGVDAKLAVRVNDLMLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVI 484
            ++ R++  +S+  G+      D      + +KG  L     Q+ + ++   G+   K  
Sbjct: 434 EQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQAFVDSGAGNGRLKTE 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
             L          +G+A  LT  +  A     +LY+ G+  +
Sbjct: 494 RAL--LAKALTNVQGMAAALTGYLMAAQQDVTSLYKVGLGSV 533


>gi|221067805|ref|ZP_03543910.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220712828|gb|EED68196.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 380

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 136/386 (35%), Gaps = 29/386 (7%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A  +             WD+    P    L R++   GL    +            H 
Sbjct: 16  RFAREHIAPHVT------AWDEAGEFP--RQLYRQAAELGLLGIGYPEELGGTA--ATHS 65

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +RAA    + +    H  S  V ++ +   +  P V       + S          +   
Sbjct: 66  LRAALWLALCR----HGGSGGVLASLLSHNIGLPPVVA-----LGSDVLKQQVVPEVLAG 116

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RV 253
                L +TE  GG+D+AA+ ++ ++  D  Y + G K F++S M   +I +A   G   
Sbjct: 117 RKIAALAITEPGGGSDVAALRTRARREGDE-YVIEGEKTFITSGMRADWITVAVRTGEER 175

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  +L  G   GL    L +K+G + + T  L F         LLG        + 
Sbjct: 176 GACGISLILVPGDSAGLRRSPL-HKMGWQCSDTAHLFFEGVRVPASHLLGVEGEGFRAIM 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A  ++   +    EA+ +A++R   G  L    V++  + D+   + +  
Sbjct: 235 HNFNGERLGIACAALGFAQACYDEALAWAQQRQTFGVTLNQHQVIRHKLVDMQQRLRSTE 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A    +    D   S ++      ++    K    +        A++ +GG G++     
Sbjct: 295 AWINAVCAGADGGDSGADWVGEVCVL----KNHATQTMQFCADTAVQILGGMGFMRGTLS 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456
            R YRE    +I  G+   M      
Sbjct: 351 ERIYREVKVLTIGGGTEEIMKELAAR 376


>gi|319949060|ref|ZP_08023156.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
 gi|319437279|gb|EFV92303.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea
           P4]
          Length = 605

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/564 (17%), Positives = 185/564 (32%), Gaps = 90/564 (15%)

Query: 38  SSDSLLVALIA--------NFPSVVHKELELLGEYVLSCTAQELA-----RMANYNTPQL 84
             D LL   +          +     + ++ + +   S    E       R A+   P+L
Sbjct: 11  DLDFLLHDWLRVSELTGRERYADHSRETIDAVLDL--SAELAETYFAPHFRKADLTEPRL 68

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
                     ++VE  P     L +     L  +  D     +       +     +  A
Sbjct: 69  VG--------EEVELIPEIGEALTKFAEADLVGAAMDERVGGMQLPYTAYLACMAWFYAA 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +        +  +A+++    +    + +               PM +      + L+E
Sbjct: 121 NISTAAYPLLTTGNANLLLTHGSDEQIRTYVE-------------PMIQGRYTGTMCLSE 167

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RV 253
              G+++A IT++ +   DG Y L G K ++S            ++LA+V G       +
Sbjct: 168 PHAGSNLADITTRAEPQPDGTYRLFGQKMWISGGEHQMAENIVHLVLAKVPGSPAGTRGI 227

Query: 254 GCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFL 298
             F+VP+ L D     G  N +    L +K+G R                       G+L
Sbjct: 228 SLFIVPKFLVDDDGSIGERNDIVITGLNHKMGFRGTVNTMPTLGQGIHTPGGRPGAVGYL 287

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------- 348
           +G+ N     +  M     L   + + +       +++ YAR R   G            
Sbjct: 288 VGEENTGLKKMFTMMNEARLGVGLGATAIGYTGYLKSLDYARNRPQ-GRPAGADPSTPQV 346

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKY 402
            L     ++R +      +  A AL    A   D+ K+ S E +        ++ PI K 
Sbjct: 347 MLTRHTDVRRMLLAQKSYVEGALALCLFCARLVDDEKTGSPEESTAAKTLLDVLTPIAKS 406

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           W  +        A++ +GG+GY  +  + +HYR++  N I  G+      D+L       
Sbjct: 407 WPSQWCLKANELAVQVLGGAGYTIDYDVEQHYRDNRLNPIHEGTHGVQGQDLLGRKVLAG 466

Query: 463 NLFEQLFST--------LEQDLGSSGKKVITILRDSISLCKE-DKGLARFLTEK--IALA 511
                   T             G    ++ ++LR  ++   E    LA          LA
Sbjct: 467 GGAGLAALTGRITATCDHAATAGGVVSELASLLRPRVTRLIEVTTALAEIGATDPEAFLA 526

Query: 512 SSAAALYRAGMNDIADVFLENRFL 535
            +   L   G   IA V++E    
Sbjct: 527 DATEYLEATGHVVIAWVWIEQLLA 550


>gi|260222369|emb|CBA31864.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 461

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 128/344 (37%), Gaps = 32/344 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   +W K    P       ++ H GL          P  
Sbjct: 5   QDQEMIRDAVRDFAQAELW-PNAAKWGKEHTFP-------KAAHQGLAALGAYGICVPEE 56

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS------MVALMTTPRVHKDWAPKIFSRE 182
              A         ++ ++ AG   + +V S +      ++      +  K W        
Sbjct: 57  LGGAGLDYVTLALVLEEIAAGDGGTSTVISVTNCPVNAILMKFGNAQQKKQWLE------ 110

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                  P+ +  +     LTE   G+D +++ +   +  D  Y ++G K F++S  + D
Sbjct: 111 -------PLAQGQMLGAFCLTEPHVGSDASSLRTTALRQGDE-YVINGVKQFITSGKNGD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             I++A  +   G   +   L   +  G    RL++K+G  S+ T ++ F N       L
Sbjct: 163 VAIVIAVTDKAAGKKGMSAFLVPTNAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G      G          +  A  SV   R +L  AI YA+ R   G  + +   +   
Sbjct: 223 IGKEGEGYGIALGGLEGGRIGIAAQSVGMARSALDVAIAYAKDRQSFGQPIFNHQAVGFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +AD A  + AA  L +  A   D  +   +EAA A++ A     
Sbjct: 283 LADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFASEMAE 326


>gi|84501928|ref|ZP_01000086.1| acyl-CoA dehydrogenase (acd-11) [Oceanicola batsensis HTCC2597]
 gi|84389923|gb|EAQ02557.1| acyl-CoA dehydrogenase (acd-11) [Oceanicola batsensis HTCC2597]
          Length = 380

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/380 (16%), Positives = 121/380 (31%), Gaps = 31/380 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +     RWD+   +P       R    G        ++                      
Sbjct: 21  FRDRAARWDREGIYPE--ENHHRLGALGYLGMTIPEAYGGGGASLVDCYLVIEELAKVDF 78

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               ++     S  ++A   +  +   + P+  + E             +   +  TE  
Sbjct: 79  NTALIVHDQNVSPRIIATCGSEALKGAFLPRFAAGE-------------IECAISWTEPE 125

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D  A+T+  +   +G     G K F +    +D  ++ A+     G   +  +L + 
Sbjct: 126 AGSDATAVTTSLRPDGNGFVLNGG-KIFTTFGDRADYLLVYARFCDSKGARGIGTVLVER 184

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-------ILIYL 318
              G+    L+ K+G R     E+ F +        +                      +
Sbjct: 185 DSPGVTVNILEQKMGARGCNECEIHFDDVRVPADNIVTEGLADASSGFVRPLAVYNATRV 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
              I+++     +   A  Y + R   G  L D   ++  ++D+ + I AA AL +   +
Sbjct: 245 GMGILALGVAEGAFDLARDYMKTRRQFGKALSDMQGLQWMMSDMTVQIEAARALCYTALS 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  +           ++ I K    +MA  V  +AM+  GG GY     + R  R+  
Sbjct: 305 LIDRGQPDP-------TLSSIAKVQATEMAQRVTHDAMQMFGGYGYFGSLPLERMVRDVR 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             +I  G+       +   L
Sbjct: 358 MLTITGGTTQIHKNGIARSL 377


>gi|78223282|ref|YP_385029.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78194537|gb|ABB32304.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 392

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 124/360 (34%), Gaps = 38/360 (10%)

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEA------GHLMSPSVTSASMVALMTTPRVH 171
             +     P     A     A   LM +LE                    +    +    
Sbjct: 60  LGFYGPNLPEKYGCAGLSNVAYGLLMYELERGDSGLRSFASVQGSLVMYPIYAYGSEAQK 119

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ + E                  GLTE   G++ A + +   + ++G + ++G 
Sbjct: 120 EYWLPKLAAGE-------------KIGCFGLTEPDFGSNPAGMRTNAVREANGKWRINGS 166

Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K ++++  ++D  ++ A+ +       V   L +    G    ++  K   R++ T EL 
Sbjct: 167 KMWITNGSVADVAVVWARTDD-----GVRGFLVEKGTPGFSAPKMHGKWSLRASVTSELV 221

Query: 291 FSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F +        LL ++    GP+  +        A  ++         A+ YA  R    
Sbjct: 222 FEDVIVDEEKSLLPNVKGLKGPLGCL-TQARYGIAWGALGAADACYQAALEYALSRIQFD 280

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    + +R +A++  +I     L  +L    D+      + + A++           
Sbjct: 281 KPIASYQLQQRKLAEMVTEITKGQLLVMQLGRLKDQGNYSPAQVSMAKM-------NNVH 333

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +A  +   A   +G +G + E  I RH     A     G+ + M L ++     G + F 
Sbjct: 334 VAINICRTARTILGANGIMSEYPIMRHANNLEAVYTYEGTHD-MHLLIIGEKVTGISAFR 392


>gi|15607541|ref|NP_214914.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium tuberculosis H37Rv]
 gi|31791576|ref|NP_854069.1| acyl-CoA dehydrogenase FADE7 [Mycobacterium bovis AF2122/97]
 gi|121636312|ref|YP_976535.1| putative acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660165|ref|YP_001281688.1| putative glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148821596|ref|YP_001286350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
 gi|167970786|ref|ZP_02553063.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis H37Ra]
 gi|215402150|ref|ZP_03414331.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           02_1987]
 gi|215409910|ref|ZP_03418718.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425620|ref|ZP_03423539.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T92]
 gi|215429220|ref|ZP_03427139.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           EAS054]
 gi|215444486|ref|ZP_03431238.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T85]
 gi|218752027|ref|ZP_03530823.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis GM
           1503]
 gi|219556216|ref|ZP_03535292.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T17]
 gi|224988784|ref|YP_002643471.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|254363362|ref|ZP_04979408.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549342|ref|ZP_05139789.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260199396|ref|ZP_05766887.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           T46]
 gi|260203548|ref|ZP_05771039.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           K85]
 gi|289441779|ref|ZP_06431523.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
 gi|289568314|ref|ZP_06448541.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
 gi|289572985|ref|ZP_06453212.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
 gi|289744096|ref|ZP_06503474.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
 gi|289748887|ref|ZP_06508265.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
 gi|289752429|ref|ZP_06511807.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
 gi|289756468|ref|ZP_06515846.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
 gi|289760514|ref|ZP_06519892.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
 gi|294995156|ref|ZP_06800847.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis 210]
 gi|298523874|ref|ZP_07011283.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
 gi|306774494|ref|ZP_07412831.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
 gi|306779240|ref|ZP_07417577.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
 gi|306783028|ref|ZP_07421350.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
 gi|306787396|ref|ZP_07425718.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
 gi|306791949|ref|ZP_07430251.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
 gi|306796136|ref|ZP_07434438.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
 gi|306801993|ref|ZP_07438661.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
 gi|306806207|ref|ZP_07442875.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
 gi|306966403|ref|ZP_07479064.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
 gi|306970598|ref|ZP_07483259.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
 gi|307078324|ref|ZP_07487494.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
 gi|307082882|ref|ZP_07491995.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
 gi|1817715|emb|CAB06591.1| ACYL-CoA DEHYDROGENASE FADE7 [Mycobacterium tuberculosis H37Rv]
 gi|31617162|emb|CAD93269.1| PROBABLE ACYL-COA DEHYDROGENASE FADE7 [Mycobacterium bovis
           AF2122/97]
 gi|121491959|emb|CAL70422.1| Probable acyl-CoA dehydrogenase fadE7 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134148876|gb|EBA40921.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504317|gb|ABQ72126.1| putative glutaryl-CoA dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148720123|gb|ABR04748.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis F11]
 gi|224771897|dbj|BAH24703.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289414698|gb|EFD11938.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T46]
 gi|289537416|gb|EFD41994.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis K85]
 gi|289542067|gb|EFD45716.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T17]
 gi|289684624|gb|EFD52112.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis 02_1987]
 gi|289689474|gb|EFD56903.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T92]
 gi|289693016|gb|EFD60445.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis EAS054]
 gi|289708020|gb|EFD72036.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis GM 1503]
 gi|289712032|gb|EFD76044.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis T85]
 gi|298493668|gb|EFI28962.1| acyl-coa dehydrogenase fade7 [Mycobacterium tuberculosis 94_M4241A]
 gi|308216846|gb|EFO76245.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu001]
 gi|308327793|gb|EFP16644.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu002]
 gi|308332147|gb|EFP20998.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu003]
 gi|308335930|gb|EFP24781.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu004]
 gi|308339535|gb|EFP28386.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu005]
 gi|308343412|gb|EFP32263.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu006]
 gi|308347221|gb|EFP36072.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu007]
 gi|308351249|gb|EFP40100.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu008]
 gi|308355803|gb|EFP44654.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu009]
 gi|308359722|gb|EFP48573.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu010]
 gi|308363664|gb|EFP52515.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu011]
 gi|308367315|gb|EFP56166.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis SUMu012]
 gi|323721207|gb|EGB30268.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis CDC1551A]
 gi|326902226|gb|EGE49159.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis W-148]
          Length = 395

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 139/424 (32%), Gaps = 38/424 (8%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P  +   L    E  +  T +     A + TP + A+   G+        P   
Sbjct: 8   ALDRDDPLGLDASLSSD-EIAVRDTVRRF--CAEHVTPHVAAWFEDGDL-------PVAR 57

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    GL                 + +    L          +      +   +A 
Sbjct: 58  DLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIAS 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + +               +    GLTE   G+D AA+ ++ ++    
Sbjct: 118 FGSDEQKRQWLPGMATG-------------DLLGCFGLTEPDVGSDPAAMKTRARRDGPD 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                G  W  +  ++D  I+ A  +  +  F+VP         G     + +K+  R++
Sbjct: 165 WVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPT-----DTPGFTANTIGHKLSLRAS 219

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            T EL   N        L  +TG    +  L          ++   R +   A+ YAR+R
Sbjct: 220 ITSELVLDNVRLPADAMLPGATGLRAPLACLSEARYGIVWGAMGAARSAWQCALDYARQR 279

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + +  + D+A+++     LS  L    D    R ++ ++        K 
Sbjct: 280 TQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFG-------KL 332

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              + A  +   A   +GG+G   E  + RH     +     G+   M   VL     G 
Sbjct: 333 NNTREALKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGL 391

Query: 463 NLFE 466
             F 
Sbjct: 392 AAFR 395


>gi|299531325|ref|ZP_07044735.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298720732|gb|EFI61679.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 387

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 27/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
            +   +  + +  + E +  +    IR           A    +     +  ++L  +  
Sbjct: 55  WLRHAVAGTAYGGAGEHIDTRAICLIR--ETLARHSGLADFAFAMQGLGSGAISLAGSEE 112

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
             K +   +              +        L+E   G+D+AA+  + +   D      
Sbjct: 113 QKKRYLSLV-------------ARGDAISAFALSEPDAGSDVAAMACEARLEGDHYVING 159

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +  ++D +++  +     G   +  L+ +    G       N I         L
Sbjct: 160 EKTWISNGGIADFYVVFVRTGEAAGSRGLSALIVEAGTPGFEIAERINVIAPH--PLARL 217

Query: 290 EFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +FSN        +     G    M+ L       A  S+   R ++ EA+  A  R + G
Sbjct: 218 KFSNCRVPATQLVGAAGEGFKVAMRTLDVFRTSVAAASLGFARRAMDEALQRATSRKMFG 277

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G+L D  + +  +A +A  I +A  L++R A   D+ ++ + EAA A++ A        +
Sbjct: 278 GVLADFQLTQAKLAQMATQIDSAALLTYRAAWLRDQGENVTREAAMAKMTA-------TE 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  VI  A++  GG G + E+ + R YRE  A  I  G+     L +   L K
Sbjct: 331 NAQQVIDAAVQIWGGLGVVSEQPVERLYREIRALRIYEGATEVQQLIIGRDLIK 384


>gi|229488410|ref|ZP_04382276.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229323914|gb|EEN89669.1| glutaryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 390

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 117/360 (32%), Gaps = 33/360 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     G+     +      +   A+ +    L  +       +      +   + 
Sbjct: 52  RELAKELGALGVLGMHLEGYGCAGMSATAYGLACQELEAVDSGIRSLVSVQGSLAMFAIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ + E                  GLTE   G++   + +  ++  D
Sbjct: 112 HNGSEEQKEEWLPRMAAGE-------------AIGCFGLTEPDFGSNPGGMRTNAKRDGD 158

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  V  F+VP         G     +KNK+  R+
Sbjct: 159 DWILNGTKMWITNGSIADVAVVWARTDDGVRGFVVPT-----DTPGFSAPEIKNKMSLRA 213

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +        L  + G       L  L+ A   +        R  L  AI Y
Sbjct: 214 SVTSELVLEDVRLPASAMLPKARGLS---GPLGCLNEARFGIIFGAMGAARDCLETAISY 270

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R V    L    + +  IAD+A+++     L+  L    D    R E+         
Sbjct: 271 ARDRKVFDKSLAAYQITQAKIADMAVELGKGQLLAIHLGRLKDAGTVRPEQ-------VS 323

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 324 TGKLNNVREAIKIARECRTILGANGITLEYPVIRHANNLESVLTYEGTSEVHQLVIGRAL 383


>gi|160895591|ref|YP_001561173.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361175|gb|ABX32788.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 383

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 140/414 (33%), Gaps = 42/414 (10%)

Query: 58  LELLGEYVLS-CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
            + LG        A  +AR A+     L       +R D+        AL       GL 
Sbjct: 3   FQRLGTTADDHAIADAVARFADDALAPL------AQRMDEE-------ALSATCHVPGLS 49

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-----VALMTTPRVH 171
                    P           A L  +  +      + S+  A       V +       
Sbjct: 50  ALGVMGMNLPEALGGPGVTPTAMLLSLVAISRACAATSSMIGAHYLGTDAVLIGGDDAQR 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P+  S E+                  LTE RGG+  A + ++  +  D        
Sbjct: 110 QQWLPRCASGEW-------------LAAFALTEPRGGSHPADMRTRAVRDGDDYLITGVK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  ++  +   ++ A+ +   G   V   +      G+     +  +G R     E+  
Sbjct: 157 HFISNAAEARFMVVFAKTDMDAGARGVSAFIVPRDLPGIQVSAPEKLMGIRGGHAFEVSL 216

Query: 292 SNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                     L    TG    MK+L    LD A  ++     +LA A  +A +R V G  
Sbjct: 217 DGVRVPASHRLGAEGTGFKTAMKVLDNSRLDVAATALGVAEAALAAAAQWANQRLVGGEP 276

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L  +  ++  +AD+ L + A+ AL+ +        +  ++ +A A++ A        +M 
Sbjct: 277 LATKQGIQWKLADMKLRLEASWALTMQALALRQAGQPFTQHSAMAKLHA-------SEMV 329

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             V  EA++  GG GY  E  + R  R++    I  GS       +   +  G+
Sbjct: 330 GFVTDEALQIHGGYGYTREMPLERLVRDARILRIYEGSSEVQRSIIARGVLGGS 383


>gi|72160614|ref|YP_288271.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71914346|gb|AAZ54248.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 607

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 92/495 (18%), Positives = 185/495 (37%), Gaps = 76/495 (15%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +    E    A+ N P    + P       V    ++    +  +    +       
Sbjct: 47  RLATGVLAESFADADRNPPV---FDPKTH---SVTIPESFKKSYQAYMDAEWYRLDLPPE 100

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                  ++     A + L A   A H+ S     A ++      +  K    K+     
Sbjct: 101 LGGSGAPRSLVWAVAEMILGA-NPAVHMYSAGPGFAHVLWQEGNEQQKKF--AKLA---- 153

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
                    +      + LTE   G+D+ A  ++  K  DG + + G K F++S   D  
Sbjct: 154 --------IERGWGATMVLTEPDAGSDVGAGRTKAIKQPDGTWHIEGVKRFITSAEHDMA 205

Query: 243 ----FIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATV 287
                ++LA+ EG       +  FLVP+ L +     G  NG+    ++ K+G + + T 
Sbjct: 206 ENIFHLVLARPEGHGPGTKGLSLFLVPKYLVNEDGSLGERNGVYVTNVEEKMGLKVSTTC 265

Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F       G+L+GD +     +  +     +     +++ +      A+ YA+ R  
Sbjct: 266 ELTFGAKHPAIGYLVGDKHDGIRQMFLIIEYARMMVGTKAIATLSTGYLNALAYAKERVQ 325

Query: 345 SGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKS 385
                           +   P ++R++        A  AL    A   D         + 
Sbjct: 326 GADLTQQADKTAPRVTITHHPDVRRSLMLQKSYAEAMRALVLYTATFQDAVQIATARGED 385

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +E  A   ++ P+ K    + + A++AE+++ +GGSGY+++  I ++ R+S  +++  G
Sbjct: 386 PAEYEAMNDLLLPLVKGVGSERSYALLAESLQTLGGSGYLQDYPIEQYIRDSKIDTLYEG 445

Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505
           +     +D+              F  + ++ G +  K++  +++     K D G  +   
Sbjct: 446 TTAIQGMDL-------------FFRKIVKNNGQALGKLMGEIQE---FAKSDPGNGQLKN 489

Query: 506 EKIALASSAAALYRA 520
           E  AL + AAA  +A
Sbjct: 490 EC-ALLAQAAADVQA 503


>gi|317407234|gb|EFV87217.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 376

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 131/372 (35%), Gaps = 28/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K    P   +L RR+  +GL        +        H          A    
Sbjct: 26  PHYAEWEKAGIVP--RSLWRRAGAEGLLNCALPEPYG-AGGDFGHAAVVIEELARANFLG 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S   A  +    T    + W P              M +  +   + LTE   G
Sbjct: 83  IGFSIHSDMVAPYLDAFGTTAQKERWLP-------------AMARGDIIGAIALTEPGAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+ A+ ++ ++  D  Y L G K F+++ ++    I+LA  +  +G   +     +   
Sbjct: 130 SDLKAVRTRARRDGDH-YVLDGQKTFITNGVNAGLAIVLASTDPDLGARGLSLFCVEEGQ 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G       +KIG     T EL F         LLG  N +   +        L  A+ +
Sbjct: 189 PGFTKGTPLSKIGQHCQDTCELYFDGLRLPVDCLLGRENNAFEYLTQELARERLAIALRA 248

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            + +   + EA  Y R R V G  +ID    +  +A       +A A +  L    D+  
Sbjct: 249 GASLEGMIDEAAEYTRNRKVFGRRVIDYQNSRFKLA-------SARAQATMLRVFLDDCL 301

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +          A I K    +M  A++ + ++  GG GY+ E  I R + ++ A  +  
Sbjct: 302 EKHMAGELDATRAAIAKLNATEMQGAILDDLLQLYGGYGYMAEYGIGRAWADARALRLFG 361

Query: 445 GSGNAMVLDVLN 456
           G+   M   +  
Sbjct: 362 GTSEIMREIIGR 373


>gi|332520065|ref|ZP_08396529.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044624|gb|EGI80818.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 392

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/370 (19%), Positives = 132/370 (35%), Gaps = 34/370 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                +    A  A   +SI +GL        + P     A   + +   +M ++E G  
Sbjct: 35  RDVSPIIEEAAQKAEFPKSIINGLAEIGAFGPYIPEEYGGAGLDQISYGLIMQEIERGDS 94

Query: 152 MSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              S  S         +           + PK+ S E+                 GLTE 
Sbjct: 95  GVRSTASVQSSLVMYPIWKYGNEEQRNKYLPKLASGEW-------------IGSFGLTEP 141

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLED 264
             G++   + +  + + D         W  ++P  +  ++ A+  EGR+   +V R +E 
Sbjct: 142 DHGSNPGGMVTNFKDMGDHYLLNGAKMWISNAPFCNVAVVWAKNEEGRIHGLIVERGME- 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAI 322
               G       NK   R++AT EL F N        L   +G    +  L       A 
Sbjct: 201 ----GFTTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGCLDSARFGIAW 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++         A+ Y++ R   G  +    + ++ +A++  +I  A  L++RL    + 
Sbjct: 257 GAIGAAMDCYDTALRYSKERMQFGKPIGQFQLQQKKLAEMITEITKAQLLAWRLGVMREN 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S + + A+           +MA  +  EA + +GG G   E SI RH     +   
Sbjct: 317 GTATSAQISMAKR-------NNVEMAINIAREARQMLGGMGISGEYSIMRHSMNLESVIT 369

Query: 443 LLGSGNAMVL 452
             G+ +  +L
Sbjct: 370 YEGTHDIHLL 379


>gi|116327465|ref|YP_797185.1| isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331921|ref|YP_801639.1| isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120209|gb|ABJ78252.1| Isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125610|gb|ABJ76881.1| Isovaleryl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 386

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 138/362 (38%), Gaps = 39/362 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVA 163
             R     GL           +    A         + A      L  ++  V   +   
Sbjct: 51  FRRIGSELGLFGITVPEEDGGMGMD-AVAAVIIHEEMSAYDPGFMLSYLAHEVLFVNNFY 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             ++P   + +  K+ S E+               G+G+TE   GTD+  + +   K  D
Sbjct: 110 HSSSPAQREKYLSKVISGEW-------------VGGMGMTEPGAGTDVLGMRTITVKKGD 156

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K ++++  +   F++ A++            + + S  G    + + K+G R
Sbjct: 157 -KYVLNGSKQYITNGNIGSVFLVYAKMSKD--SKRTTSFIVESSFPGFSVGKKEEKMGMR 213

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S+ T +L F +        +    G +  M     +  +  A  S+   +  +     Y 
Sbjct: 214 SSPTTQLIFEDCEVPAENLVGQEDGALVHMMRNLEIERVTLAAQSLGIAKRCVDIMADYT 273

Query: 340 -RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  L +   ++R +A+   D        +++A+  +     S  AA A+++A 
Sbjct: 274 IRHREAFGKKLSEFGQIQRLLAESYAD--------YQVASGINPDSRNSLGAASAKLVA- 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  +MA  V   A++ +GG GY  E  + R +R+S   SI  G+  AM  +++  L
Sbjct: 325 ------TQMAERVSRNAIQALGGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADL 378

Query: 459 EK 460
           +K
Sbjct: 379 KK 380


>gi|71279950|ref|YP_271311.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
 gi|71145690|gb|AAZ26163.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H]
          Length = 394

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 129/365 (35%), Gaps = 31/365 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++R+    GL  +  D      V   ++ + A  +  +       +   S      +   
Sbjct: 55  IMRQFGELGLLGATIDGYGCSGVNYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPINAY 114

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + PK+ + EY                 GLTE   G+D +++ ++ +K+  G 
Sbjct: 115 GTTEQKEKYLPKLATGEY-------------IGCFGLTEPGSGSDPSSMITRAKKVDGGY 161

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                  W  +SP++D F++ A+ E       +   + +    GL   +++ KI  R++ 
Sbjct: 162 RLTGSKMWITNSPIADVFVVWAKNEAEG--NQICGFVLEKGMAGLSAPKIEGKISLRTSI 219

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341
           T E+   N F           G          L+ A   +S   +  AE   +  R    
Sbjct: 220 TGEIVMDNVFVPEENMFPEIRGLAGPFG---CLNMARYGISWGALGAAEFCWHGARQYGL 276

Query: 342 -RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L    + +  +A++  +I+     S R+    D  K       +   M  + 
Sbjct: 277 DRIQFKRPLAQTQLFQTKLANMQTEISLGLQASLRVGRIIDTKK-------WDPTMISMV 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  +  +   A +  GG+G  +E  + RH       +   G+ +   L +L   + 
Sbjct: 330 KRNNCGKSLDIARMARDMHGGNGISDEFHVIRHMVNLETVNTYEGTYDVHGL-ILGRAQT 388

Query: 461 GTNLF 465
           G   F
Sbjct: 389 GLQAF 393


>gi|299533654|ref|ZP_07047028.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298718376|gb|EFI59359.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 384

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 128/359 (35%), Gaps = 28/359 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L++R    GL        +       +   +    +  +A          +  ++  + +
Sbjct: 40  LVQRMREVGLFGHSIPEEYGGSGLTSEELSLVNIEVSQVATTFRARFGGNTGIASESLVV 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + P + S               V     LTE   G+D  A  +   +  D 
Sbjct: 100 DGTLEQKRKYLPLLASG-------------KVTGCFALTEPEAGSDATAQKTVAVRDGDD 146

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y L+G K F+++ P++D F ++A+ +    G   +   L +    GL       K+G  
Sbjct: 147 -YVLTGKKCFITNAPIADLFTVVARTDPQGRGANGLTAFLIERGTPGLTTPTPPRKMGQH 205

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVE--DMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            +   E+   +        +    G      M+ L    ++ A + +      + E    
Sbjct: 206 GSPVGEVLLDSVRVHKSAIVGELEGQGFRTAMRALNKQRINLAGLCIGPAIRLVDEMARR 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R  SG  + +  ++++ IA+  +++ AA AL    A   D  +  + EA+       
Sbjct: 266 ALSRRQSGQPIAEFQLVQQLIAESNMEVHAARALLMETARKRDAGQDVTMEASM------ 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             K +  +M   V   A++  GG GY+      R YR+     I  G+    + ++   
Sbjct: 320 -CKLFASEMCGRVADRAVQLFGGQGYMAGNVAERFYRDVRVFRIYEGTSQVHIGNIAKR 377


>gi|120406664|ref|YP_956493.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119959482|gb|ABM16487.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 464

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 74/416 (17%), Positives = 152/416 (36%), Gaps = 45/416 (10%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    +LAR  +    ++    P    +D+ +  P W  L   +   G +  ++ R    
Sbjct: 8   TAAQHDLARRTHEFAEEVIR--PVAADYDQRQEFP-WPVLEEAAAR-GFYSPLFYRDLIG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L+       G  +     + S +    +P     WAP+ F    D  
Sbjct: 64  DPTGLSLPMFMEELF-WGCAGIGLAVVMPALALSAIGQAASPEQMLQWAPECFGTPGDL- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFL-SSPMSDA 242
                        L ++E  GG+D+  + +  ++     D  + + GHK ++ +  ++D 
Sbjct: 122 ---------KLAALAISEPEGGSDVRNLRTTARRAGPGADADWIIDGHKMWIGNGGIADV 172

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V+  +G       +  G   GL   R  +K+G R++ T EL+ +         L
Sbjct: 173 HVVNAVVDQELGHKGQALFIVPGGTPGLDMVRKLDKLGCRASHTAELKLTGVRVPADHLL 232

Query: 303 N----------VSTGPVEDMK----------ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                       +   +E  +                 A  ++   R +L     YA RR
Sbjct: 233 GGQEKLDHKLARAREAIEGARHSGSATLGTFEQTRPMVAAQALGIARAALEYVTEYANRR 292

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +ID   +   +AD+A  + AA  L++R +                     ++K 
Sbjct: 293 EAFGAPIIDNQGISFPLADLATGLDAARLLTWRASWMAATGVPFER------GEGSMSKL 346

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              ++A      A++ +GG GY+++  + + YR++   +I  G+     + + N L
Sbjct: 347 AASELAVRATERAVQTMGGWGYVKDHPVEKWYRDAKLYTIFEGTSEIQRMVISNAL 402


>gi|325180577|emb|CCA14983.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 422

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 129/361 (35%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +++R     G      D      V   ++ + A  +  +       +   S      + 
Sbjct: 81  KSIMREFGRQGFLGPTIDGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPIH 140

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              + +  K + PK+ + E             +    GLTE   G+D  ++ ++ +   D
Sbjct: 141 QFGSEQQKKKYLPKLATGE-------------LIGCFGLTEPNHGSDPGSMETRARAKGD 187

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  ++P++D  ++ A+ + G +  F++ + L      GL    +  K    
Sbjct: 188 SFILNGSKNWITNAPIADVLLIWAKDDQGDIRGFILEKDL-----PGLATTYIDGKATLM 242

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++AT  +   +        L    G          L++A   +S   +  A+A +   R 
Sbjct: 243 ASATGMIFMEDVQVPKDCMLQNVKGLK---GPFSCLNNARYGISWGALGAADACYEVARS 299

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    ++++ +AD++ +I+       R+    DE +   E       + 
Sbjct: 300 YTLNRKQFGVPLAANQLIQKKLADMSTEISIGLQSCLRVGRLLDEKRCPVE-------LI 352

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A + +GG+G  +E  + RH     A +   G+ +   L +   
Sbjct: 353 SMVKRNSCGKALDIARAARDMLGGNGLSDEYHVIRHLVNLEAVNTYEGTHDIHALILGRA 412

Query: 458 L 458
           +
Sbjct: 413 I 413


>gi|302414678|ref|XP_003005171.1| aidB [Verticillium albo-atrum VaMs.102]
 gi|261356240|gb|EEY18668.1| aidB [Verticillium albo-atrum VaMs.102]
          Length = 647

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 120/580 (20%), Positives = 205/580 (35%), Gaps = 71/580 (12%)

Query: 15  VHQPSDSLFALNQPPLFIG-MNAYSSDSLLVALIANFPSVVHKEL-----ELLGEYVLSC 68
             Q   ++      P      +  + D +L+ L   +     +++       +   VL  
Sbjct: 14  FFQQLPTILPQYTSPQLANAHDEATDDVVLIRLAKLYLPDSSQQVVGKAMHEISRTVLEP 73

Query: 69  TAQELARMANYNTPQLHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              + A  A    P L      GE  R D +     W AL    I  G+    +D+S   
Sbjct: 74  ATLKHAVEAETVPPTLQPLTTFGELNRDDPLVLCHGWKALKAIGIQAGVVSLGYDKSTST 133

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
             R+  H+      +          MS +  SA  ++         +   +    EY   
Sbjct: 134 HNRR-VHQFLVNHNWHHTSTLTMCPMSMTDGSARFISNHIGDDDGDEKGRRAVLSEYYRR 192

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK------------------ISDGIYCL 228
             +     +   G  +TE+ GG+D+    +   +                     G + +
Sbjct: 193 LVSSDPSEAWTSGQWMTERSGGSDVRGTETIATRLTPTDLKGPGGRGQDVLGQPLGPWSI 252

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNA 285
            G KWF S+  SD  ++LAQ    +  F VP   + G     NG+  QRLKNK+G +   
Sbjct: 253 DGFKWFSSATDSDMTMLLAQTPKGLSAFCVPMRRKAGKGSELNGIRIQRLKNKMGTKGLP 312

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           T ELE     G+L+G+       +  +  +  L +   SVS     LA    Y + R V 
Sbjct: 313 TAELELKGARGWLVGEEGKGVKAISTVLNITRLYTGAGSVSYWARGLAVCRAYTKVRKVR 372

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAA-------- 391
           G  L +       +A   +   AATAL+F         +        +  AA        
Sbjct: 373 GAYLYENLQHNHWMAGETVKYQAATALTFFGVALLGCNEQGSSVMRNTPAAALIPNDETA 432

Query: 392 --YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS------IARHYRESPANSIL 443
               R++ P+ K      A A +   MEC+GG GY E         +A+ +R+S   +I 
Sbjct: 433 KLLLRLLTPVIKAQTSVAAVAGLRANMECLGGVGYCENHEDGGILNLAKIFRDSVVQTIW 492

Query: 444 LGSGNAMVLDVLNLLE----KGTNLFEQLFSTL--------EQDLGSSGKKVITILRDSI 491
            G+ + M  DV  +L+    +G  + E +F+           +   +    V   L   +
Sbjct: 493 EGTVSVMADDVGRVLKDKRIQGGRIIEDVFAPWTLRTLKLCSKRFANECTAVTERLESLL 552

Query: 492 SLCKE-------DKGLARFLTEKIALASSAAALYRAGMND 524
           +L           +   R+L + + + ++A  L      D
Sbjct: 553 ALISRTKADGALLEYSGRWLLDHLDVVTTATLLLYDASTD 592


>gi|163761193|ref|ZP_02168269.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
 gi|162281532|gb|EDQ31827.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43]
          Length = 399

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 126/361 (34%), Gaps = 33/361 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + R    +GL        +        ++ + A  +  +       +   S      + 
Sbjct: 58  EIFREMGQNGLLGITLPEEYGCAGASYVSYGLVAREIERVDSGYRSMMSVQSSLVMFPIY 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ S E+                 GLTE   G+D A + ++  K   
Sbjct: 118 AYGSEEQRRKYLPKLASGEF-------------IGCFGLTEPDAGSDPAGMKTRAIKTDG 164

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E       V   + +    GL   ++  K+  R+
Sbjct: 165 GYVLRGSKMWISNSPIADVFVVWAKSEAHGDK--VRGFILEKGMKGLSAPKIGGKLSLRA 222

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337
           + T E+   +         +     ++ M      L+ A   +S   +  AE     A  
Sbjct: 223 SITGEIVMDDVEV----GEDAILPNIQGMGGPFGCLNRARYGISWGVMGAAEDCMHRARQ 278

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   RH     L    + ++ +AD+  +IA     S R+   FDE +       +A  M 
Sbjct: 279 YGLDRHQFNRPLAATQLFQKKLADMQTEIAMGLQSSLRVGRLFDEGR-------FAPEMI 331

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +   
Sbjct: 332 SVVKRNNCGKALDIARMARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRA 391

Query: 458 L 458
           +
Sbjct: 392 I 392


>gi|311696827|gb|ADP99700.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 389

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 125/360 (34%), Gaps = 35/360 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             G+  +     +         + + A  +  +       L   S      +       +
Sbjct: 58  ELGMLGATLPEEYGGPGLNHVCYGLIAREVERVDSAYRSALSVQSSLVMYPIYSYGKEAM 117

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K   PK+ S EY                 GLTE   G+D + + ++ +K+  G      
Sbjct: 118 KKRILPKLASGEY-------------VGCFGLTEPNHGSDPSGMETRAKKVDGGYLLSGS 164

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D  ++ A+++G+V  F++ R   +G+  GL   +++ K   R++ T  + 
Sbjct: 165 KTWITNSPIADVCVVWAKLDGKVNGFVIER---EGAT-GLETPKIQGKFSLRASETGSIF 220

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVS 345
               F      L V             L+ A   +S   +  AE   +A       R   
Sbjct: 221 MDEVFVPDENHLEVEGLKG----PFSCLNKARFGISWGSLGAAEFCWHAARNYTLERKQF 276

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    ++++ + D+  +I        +L    D      +          + K   C
Sbjct: 277 GKPLAANQLIQKKLVDMQTEITIGLQAVLQLGRMMDAGTVTPDA-------ISLLKRNNC 329

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             A  +   A +  GG+G  +E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 330 GKALDIARVARDMHGGNGIADEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRGQTGIQAF 388


>gi|288919956|ref|ZP_06414277.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288348609|gb|EFC82865.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 609

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/516 (18%), Positives = 193/516 (37%), Gaps = 66/516 (12%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              H+ L  + E V S    E    A+ + P L A    G    ++    ++    +  +
Sbjct: 36  DTAHEVLAEM-ERVASGPIAESFAAADRHPPVLDA--ATG----EITLPESFRKSYQAIL 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                          +         A+ L L A       M+    +A + +        
Sbjct: 89  DGEWFRLFLPPHLGGMGAPPTIAWAASELILGANPAVFMYMAGPTFAAILES-------- 140

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
                     E+         +      + LTE   G+D+ A  ++     DG + + G 
Sbjct: 141 -------IGTEWQKKFARWAIERHWGATMVLTEPDAGSDVGAGRAKAIAQPDGTWHIEGV 193

Query: 232 KWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQR 274
           K F++S   D       ++LA+ EG       +  FLVP+ + D      G+ NG     
Sbjct: 194 KRFITSGDWDVPENIFHLVLARPEGHGPGTKGLSMFLVPKYMPDPETGELGARNGAYVTN 253

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L+ K+G + +AT EL F       G+L+GD++     +  +     +     +++ +   
Sbjct: 254 LEKKMGLKVSATCELRFGEREPAVGWLVGDVHEGIAQMFRVIEYARMMVGTKAIATLSTG 313

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ +AR R                  +I+ P ++R +           +L    A  
Sbjct: 314 YLNALDFARERVQGADLPRSTDKSAPRVTIINHPDVRRMLMLQKAYAEGMRSLVLFTATF 373

Query: 380 FDE-----AKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            D      A+  ++EAA     ++ PI K    + +  ++A +++  GGSGY+++  I +
Sbjct: 374 QDAVALAAARGEADEAAERMNDLLLPIVKGVGSERSYELLATSLQVFGGSGYLQDYPIEQ 433

Query: 433 HYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRD 489
           + R++  +++  G+ +     L    ++    +    LF  +++   G +G   +   R+
Sbjct: 434 YIRDAKIDTLYEGTTSIQGQDLFFRKIVRDQGHALTSLFGQIQEFAKGETGNGALRSERE 493

Query: 490 SISLCKED-KGLARFLTEKI-ALASSAAALYRAGMN 523
            +    ED + +   L   + A A   A +YR G+N
Sbjct: 494 VLGASLEDVQAMVAALVGFLTAGAEDPAQVYRVGLN 529


>gi|221069364|ref|ZP_03545469.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714387|gb|EED69755.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 387

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 131/363 (36%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSAS 160
             L++     G   H    +       +     I   R  L      A    +     + 
Sbjct: 44  RQLVKALGEAGWLRHAVAGEAHGGAGEQIDTRAICLIRETLARHSGLADFAFAMQGLGSG 103

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++L  +    K +  ++   E                   L+E   G+D+AA+  + + 
Sbjct: 104 AISLAGSEEQKKRYLSRVARGE-------------AISAFALSEPDAGSDVAAMACEARL 150

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++D +++  +     G   +  L+ D    G         I 
Sbjct: 151 EGDHYVINGEKTWISNGGIADFYVVFVRTGEAPGSRGLSALIVDADTPGFEVAERIEVIA 210

Query: 281 NRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
                   L+FS+        +     G    M+ L       A  S+   R ++ EA+ 
Sbjct: 211 PH--PLARLKFSSCRVPAAQRVGEAGEGFKVAMRTLDVFRTSVAAASLGFARRAMDEALQ 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            A  R++ GG+L D  + +  +A +A  I +A  L++R A   D+ +S + EAA A++ A
Sbjct: 269 RATSRNMFGGVLADFQLTQAKLAQMATQIDSAALLTYRAAWLRDQGESVTREAAMAKMTA 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A  VI  A++  GG G + E+ + R YRE  A  I  G+     L +   
Sbjct: 329 -------TENAQQVIDAAVQIWGGLGVVSEQPVERLYREIRALRIYEGATEVQQLIIGRD 381

Query: 458 LEK 460
           L K
Sbjct: 382 LIK 384


>gi|229494616|ref|ZP_04388379.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus
           erythropolis SK121]
 gi|229318978|gb|EEN84836.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus
           erythropolis SK121]
          Length = 611

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/511 (18%), Positives = 187/511 (36%), Gaps = 71/511 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       V    ++    +       +      
Sbjct: 46  ARLAEGPLGESFADADRNPPV---FDPETH---TVALPESFKKSFKALWDAEWYRMGLSE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               V   ++       L L AQ  A H+       A ++    T    K WA  I  R 
Sbjct: 100 EVGGVPVPRSVVWAIGELILGAQPAA-HMYQAGPAFADVLFNNGTEEQKK-WAATIVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S  SD 
Sbjct: 158 WGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSDD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+        E G  NG+    +++K+G + +
Sbjct: 205 LFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFVTNVEHKMGLKVS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           AT E+ F        G+L+G+++     + D+     +     +++ +      A+ YA+
Sbjct: 265 ATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALDYAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------ 382
           +R                  +   P ++R++A          A+    A   DE      
Sbjct: 325 QRVQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLYTAAHQDEVVAQLV 384

Query: 383 -AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               +        ++ PI K    + A   + ++++ +GGSG++++  I ++ R+S  +S
Sbjct: 385 SGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDYPIEQYIRDSKIDS 444

Query: 442 ILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDSISLCK 495
           +  G+      D        ++G  L     Q+ + ++ + G+   K    L    +  +
Sbjct: 445 LYEGTTAIQAQDFFFRKIARDRGVALAHVAGQIKTFIDSEAGNGRLKAERAL--LATALE 502

Query: 496 EDKGLARFLTEK-IALASSAAALYRAGMNDI 525
           + + +A  LT   +        LY+ G+  +
Sbjct: 503 DVQAMAATLTGFLMGAQEQPTELYKVGLGSV 533


>gi|15608605|ref|NP_215983.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis H37Rv]
 gi|15840927|ref|NP_335964.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31792661|ref|NP_855154.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium bovis AF2122/97]
 gi|121637397|ref|YP_977620.1| putative acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148661259|ref|YP_001282782.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra]
 gi|148822686|ref|YP_001287440.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11]
 gi|167967417|ref|ZP_02549694.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis H37Ra]
 gi|215403320|ref|ZP_03415501.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 02_1987]
 gi|215426806|ref|ZP_03424725.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|215430359|ref|ZP_03428278.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis EAS054]
 gi|215445660|ref|ZP_03432412.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|218753183|ref|ZP_03531979.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|219557374|ref|ZP_03536450.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|224989872|ref|YP_002644559.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799484|ref|YP_003032485.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435]
 gi|254364338|ref|ZP_04980384.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550483|ref|ZP_05140930.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186412|ref|ZP_05763886.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|260200524|ref|ZP_05768015.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|260204749|ref|ZP_05772240.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289442914|ref|ZP_06432658.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|289447069|ref|ZP_06436813.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|289554744|ref|ZP_06443954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605]
 gi|289569490|ref|ZP_06449717.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|289574146|ref|ZP_06454373.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289745217|ref|ZP_06504595.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987]
 gi|289750027|ref|ZP_06509405.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|289753549|ref|ZP_06512927.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054]
 gi|289757576|ref|ZP_06516954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|289761625|ref|ZP_06521003.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|294995020|ref|ZP_06800711.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 210]
 gi|297634032|ref|ZP_06951812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207]
 gi|297731018|ref|ZP_06960136.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN R506]
 gi|306775654|ref|ZP_07413991.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001]
 gi|306779475|ref|ZP_07417812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002]
 gi|306784205|ref|ZP_07422527.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003]
 gi|306788572|ref|ZP_07426894.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004]
 gi|306792915|ref|ZP_07431217.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005]
 gi|306803174|ref|ZP_07439842.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008]
 gi|306807753|ref|ZP_07444421.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007]
 gi|306967573|ref|ZP_07480234.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009]
 gi|306971763|ref|ZP_07484424.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010]
 gi|307079483|ref|ZP_07488653.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011]
 gi|307084042|ref|ZP_07493155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012]
 gi|313658351|ref|ZP_07815231.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2791401|emb|CAA15996.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE15 [Mycobacterium tuberculosis
           H37Rv]
 gi|13881132|gb|AAK45778.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31618251|emb|CAD96169.1| PROBABLE ACYL-COA DEHYDROGENASE FADE15 [Mycobacterium bovis
           AF2122/97]
 gi|121493044|emb|CAL71515.1| Probable acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134149852|gb|EBA41897.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505411|gb|ABQ73220.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra]
 gi|148721213|gb|ABR05838.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11]
 gi|224772985|dbj|BAH25791.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253320987|gb|ACT25590.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435]
 gi|289415833|gb|EFD13073.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46]
 gi|289420027|gb|EFD17228.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A]
 gi|289439376|gb|EFD21869.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605]
 gi|289538577|gb|EFD43155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85]
 gi|289543244|gb|EFD46892.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17]
 gi|289685745|gb|EFD53233.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987]
 gi|289690614|gb|EFD58043.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92]
 gi|289694136|gb|EFD61565.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054]
 gi|289709131|gb|EFD73147.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503]
 gi|289713140|gb|EFD77152.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85]
 gi|308215878|gb|EFO75277.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001]
 gi|308327588|gb|EFP16439.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002]
 gi|308331052|gb|EFP19903.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003]
 gi|308334871|gb|EFP23722.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004]
 gi|308338661|gb|EFP27512.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005]
 gi|308345857|gb|EFP34708.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007]
 gi|308350158|gb|EFP39009.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008]
 gi|308354796|gb|EFP43647.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009]
 gi|308358749|gb|EFP47600.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010]
 gi|308362677|gb|EFP51528.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011]
 gi|308366326|gb|EFP55177.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012]
 gi|323720037|gb|EGB29148.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CDC1551A]
 gi|326903090|gb|EGE50023.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis W-148]
 gi|328459232|gb|AEB04655.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207]
          Length = 609

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 91/544 (16%), Positives = 188/544 (34%), Gaps = 78/544 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+     A+ N P    + P       +         ++     G   
Sbjct: 42  LAEAARLAEGPIAESFGY-ADRNPPV---FDPNTH---SISVPDELAKTVQAIKEAGWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +            +   A   A       V  A  + +       + WA +
Sbjct: 95  LGLAEEIGGMPAPPPLAWAVNEMIYCANPSACFFNLGPVL-AQSLYIEGNDEQ-RRWAAE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +  T             + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 153 GVQRGWQAT-------------MVLTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISG 199

Query: 238 PM------SDAFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                   +   ++LA+ EG       +  F VP  L D      G+ NG+    L++K+
Sbjct: 200 GDVGNTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKM 259

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+G ++     +  +     +   + S   +      A
Sbjct: 260 GLKSSPTCELTFGGADVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  ++  P ++R++           AL    A   D+A
Sbjct: 320 LAFAKERVQGADLTQMTDKTAPRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + PI K    + A  ++ E+++ +GGSG++ +  + ++ R+
Sbjct: 380 VAQRVSGADHDMAHRVDDLLLPIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDSI 491
           +  +S+  G+     LD     ++       + + + +    +++  S K    +LR ++
Sbjct: 440 AKIDSLYEGTTAIQALDFFFRKIVRDHGKALQFVLAQVTHTVENIDPSLKPQAELLRTAL 499

Query: 492 SLCKEDKGLARFLTEKIALASS-AAALYRAGMN------DIADVFLENRFLDNCHSTHCM 544
                   +   LT  +  A+  ++ +Y+ G+        + D+ +  R L      H  
Sbjct: 500 DDIT---AMTGALTGYLMSAAQHSSDIYKVGLGSVRYLLAVGDLLIGWRLLVLAGVAHAA 556

Query: 545 LHGR 548
           L   
Sbjct: 557 LADG 560


>gi|313117069|ref|YP_004038193.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312295021|gb|ADQ69057.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 387

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 126/359 (35%), Gaps = 29/359 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      GL+    +    P V ++A+ +    L                     +  
Sbjct: 46  ELITEFGELGLYAPNLEGYGLPNVSERAYGLIMQELEAGDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +     +W PK+ S E                  GLTE   G++ +A+ +  ++  D 
Sbjct: 106 FGSEAQKDEWLPKLGSGE-------------AVGCFGLTEPEHGSNPSAMETYAERDGDE 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP+SD  ++ A+ +       V   L +   +G+   ++ +K+  R++
Sbjct: 153 YVLNGSKTWITNSPISDVAVVWAR-DRSSEDTPVRGFLVETDRDGVTTNKIDDKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
            T E+   N     +   NV          L  L  A   ++   +  A     EA  YA
Sbjct: 212 ITGEIALQNVR---IPTENVLPNVKGMKGPLSCLTQARYGIAWGAIGAAKDAFREAQDYA 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    + ++ +A++A  I  A  L+ RLA   ++   R E  + A+     
Sbjct: 269 TDREQFGQPIGGFQLQQQNLAEMATQITLAELLAHRLAELKEQGNLRPEHVSMAKR---- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 +MA      A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 325 ---NNVRMARNQTRVAREMLGGNGITTDYSPMRHMANMETVYTYEGTHDIHTLVLGKDL 380


>gi|300938981|ref|ZP_07153679.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           21-1]
 gi|300456084|gb|EFK19577.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           21-1]
          Length = 384

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISILGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+      +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYT-HKN 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 377

Query: 459 EK 460
            K
Sbjct: 378 LK 379


>gi|187926031|ref|YP_001892376.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|241665518|ref|YP_002983877.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
 gi|187727785|gb|ACD28949.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J]
 gi|240867545|gb|ACS65205.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 391

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 121/319 (37%), Gaps = 25/319 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++L  TP   + +  K+   E                   L+E   
Sbjct: 91  ADFAFAMQGLGSGAISLHGTPEQRERYLTKVAHGE-------------AISAFALSEPDA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+ S  ++  +         W  +  ++D +++ A+     G   +   + +   
Sbjct: 138 GSDVAAMASAAREDGNDYVLDGEKTWISNGGIADFYVVFARTGEAPGSRGISAFIVEAGT 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G       N I         L F+N        +     G    M+ L       A  +
Sbjct: 198 PGFEIAERINVIAPH--PLARLRFTNCRIPASQRVGAAGEGFKVAMRTLDVFRTSVAAAA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+  A  R +  G+L D  + +  +A +A  I +A  L++R A   D+ +
Sbjct: 256 LGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGR 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A++ A        + A  VI  A++  GG G + E+ + R YRE  +  I  
Sbjct: 316 NVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPVERLYREIRSLRIYE 368

Query: 445 GSGNAMVLDVLNLLEKGTN 463
           G+     L +   L +   
Sbjct: 369 GATEVQQLIIARELLRAAA 387


>gi|300918065|ref|ZP_07134686.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           115-1]
 gi|300414756|gb|EFJ98066.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           115-1]
          Length = 383

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +   Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDTARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|161950109|ref|YP_403388.2| putative acyl-CoA dehydrogenase [Shigella dysenteriae Sd197]
          Length = 383

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPDAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D  +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADLHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|330911502|gb|EGH40012.1| acyl-CoA dehydrogenase [Escherichia coli AA86]
          Length = 383

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 138/362 (38%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +      ++  A + L        L++      SM  
Sbjct: 40  REFMRALADNGISMLGVPEEFGGIPADYVTQM-LALMELSKCGAPAFLITNGQCIHSMRR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             +  ++ K             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  FGSAEQLRK-------------TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIGNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|301063823|ref|ZP_07204313.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
 gi|300442072|gb|EFK06347.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
          Length = 539

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 155/431 (35%), Gaps = 41/431 (9%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           LH      ++  +          +       L               + + +TP   + +
Sbjct: 56  LHLIFIPEAYGGLGAGATEIAIVSERMAKMDLAVATSFLAICLGMDPIRVGSTPEQKEKY 115

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-----IYCLS 229
             KI              +  + +  G+TE   G+++ ++ ++ +++ D       Y ++
Sbjct: 116 IGKI-------------AEEGLVVAYGVTEPEAGSNVQSLKTKAERVLDENGLIKGYRIN 162

Query: 230 GHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K F+++  ++  + +LA        F+VP     G   GL   + ++K G R++ T  
Sbjct: 163 GQKQFITNGGVAQLYTILADAPDGPSFFIVP-----GGAEGLIPGKHEDKHGIRASDTCP 217

Query: 289 LEFSNTFGFL----LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L   + +  +     G           +     L  A   + G   +L + I YA+ R  
Sbjct: 218 LSLEDLYVPVEDLVGGVEGQGLKQANKVFGYTRLMVATFGLGGGVAALEKTIKYAKERVQ 277

Query: 345 SGGILIDQPV-MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            G  LID+     R +   A+ + AA A    +A   D  +         ++   I KY+
Sbjct: 278 FGTALIDKQGYTHRLLVPNAVKLEAARAYIEEVARRLDTDEED------LQVEGSIAKYF 331

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT- 462
             +   A+  +A++  GG GYI E  + +  R+    +I  G+       +     + T 
Sbjct: 332 ATEAGDAMANDAIQAFGGYGYIREYEVEKIKRDVKILTIYEGTSEIQRNIISMFRLRSTV 391

Query: 463 NLFEQLFSTLEQDLGSSGKKVIT-ILRDSISLCKEDKGLAR--FLTEKIALASSAAALYR 519
                 +  + +D+     +    +L D++ L  E    AR   LT+   +    A +  
Sbjct: 392 RSKGGFYGEIAEDMSRLPSETGGPMLADAMGLMNEVIQKARKEKLTKNQYVMFQLADMMT 451

Query: 520 AGMNDIADVFL 530
               ++A    
Sbjct: 452 WA--EVAKALC 460



 Score = 37.6 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           +      L     +   +AD+      A AL  + A   D+ K R+ E      M    +
Sbjct: 429 QKARKEKLTKNQYVMFQLADMMTWAEVAKALCRKAAE-GDDGKRRTPE-----FMKAAAR 482

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEE 427
            +  +    + A  +    G G + +
Sbjct: 483 LFAREAIHKIRANGLFVAQGCGTVLD 508


>gi|121608553|ref|YP_996360.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553193|gb|ABM57342.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 412

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 121/348 (34%), Gaps = 18/348 (5%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L+   +    M       R    W     S E        + +        L+E   
Sbjct: 73  EYCLICEQLARGWMSVASIVARGQGGWIKSAMSEEMKAKYLPRVARGEFLNASALSEPDT 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF----LVPRLLE 263
           G+D+A+I+ +  +  D         W   +  +D   + A+             +   L 
Sbjct: 133 GSDLASISCRAVREGDEWVLTGNKYWCTFADGADYLSLFARTSAPASAGQRGEGISCFLI 192

Query: 264 DGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           +                KIG     T EL           L+G    +   +        
Sbjct: 193 EKERGSFPKGMTGAPIPKIGYFGWKTFELALDGVRVPADCLIGAQGKAFLLMAKGLEGAR 252

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             +A  ++   + +L +AI YA  R   G  + +   ++  IA +A +I AA  L + + 
Sbjct: 253 AHTAARAIGLAQGALEDAIAYAGERKQFGMPIAEYQAIRFKIATMATEIEAARQLLYYVC 312

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  +    EA+ A       KY+  +MA  V ++A++  GG+GY +  ++ R++R++
Sbjct: 313 GEIDRGRRCDREASMA-------KYFASEMAERVTSQALQIFGGAGYTKLFAVERYWRDA 365

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485
               I  G+       +   L  G +  E + +    D  ++ +  + 
Sbjct: 366 RLTKIFEGTSEIQQRIIATSLL-GKSEVEAMIAARAFDTQAARRGALA 412


>gi|149635580|ref|XP_001510278.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase
           [Ornithorhynchus anatinus]
          Length = 489

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 114/311 (36%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + P++ + E             +    GLTE   G+D  ++
Sbjct: 196 SSLVMHPIHAYGTEEQKQKYLPRLATGE-------------LLGCFGLTEPNHGSDPGSM 242

Query: 215 TSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +  S            W  ++P++D F++ A+ E       V   L +    GL  
Sbjct: 243 ETRARHNSANKTFTLNGSKTWITNAPVADLFVVWAKCEDGK----VRGFLLEKGMKGLSA 298

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++ T  +   +       + N+             L++A   ++   +  
Sbjct: 299 PKIEGKFALRASVTGMILMEDVEVP---EENLLPNVSGLAGPFGCLNTARFGIAWGALGA 355

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 356 AEFCLHTARQYALDRIQFGVPLARNQLIQKKLADMLTEITIGLQACLQLGRLKDKDKATP 415

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 416 E-------MVSMLKRNSCGKALEIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTH 468

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 469 DIHALILGRAI 479


>gi|134103664|ref|YP_001109325.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291004801|ref|ZP_06562774.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133916287|emb|CAM06400.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 614

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/548 (16%), Positives = 187/548 (34%), Gaps = 81/548 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  L        A+      +    +   + P       V    A+    ++ I      
Sbjct: 42  LSELNALATGPLAESF-EEGDRTPAE---FDPKTH---SVTLPEAFKKSYQQVIEGEWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                              AA L L     A ++       A+++    T    + WA  
Sbjct: 95  LGLPDELGGYGIPPTVVWAAAELIL-GSNPAIYMYMAGPNFATILWNNGTEEQ-RGWAKL 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +  R +  T             + LTE   G+D+ A  ++  + +DG + + G K F++S
Sbjct: 153 MIDRGWGAT-------------MVLTEPDAGSDVGAGRTKAVRQADGSWHIDGVKRFITS 199

Query: 238 PMSDA-----FIMLAQVEGR----------VGCFLVPRLL------EDGSPNGLCYQRLK 276
              D       ++LA+ EG           +  FLVP+        E G  NG     ++
Sbjct: 200 ADQDMTENIMHLVLARPEGEGVETKPGTKGLSLFLVPKFHFDSETGEPGERNGAFVTNVE 259

Query: 277 NKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           +K+G  ++AT EL F        G+LLG+++     +  +     +     ++  +    
Sbjct: 260 HKMGLNASATCELTFGQHGTPAKGWLLGEVHDGIAQMFQVIEYARMMVGTKAIGTLSTGY 319

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YA+ R                  + + P ++R +           A+        
Sbjct: 320 LNALDYAKERVQGADLTKATDKTAPRVPITNHPDVRRILMLQKAYAEGLRAVYLYTGTYQ 379

Query: 381 DE---AKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           D+    K   E+ A A      + PI K    + A  ++  +++ +GGSGY+++  I ++
Sbjct: 380 DQVAQGKGAGEDVALAEAVNDLLLPIVKGVGSERAYEMLTLSLQTLGGSGYLQDYPIEQY 439

Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++  +S+  G+      D     ++         L   +++ L + G      L++  
Sbjct: 440 IRDAKIDSLYEGTTAIQAQDFFFRKIVRNNGQALGHLAGEIQKSLQAEG--ADERLKEER 497

Query: 492 SLCKEDKGLARFLTEKIALASSAAA-----LYRAGMNDIA------DVFLENRFLDNCHS 540
           +L       A+ +   I    +++      LY+ G + +       D+ +    L     
Sbjct: 498 ALVAAALEDAQGMLGAIFGFLTSSQEDVDNLYKVGQHAVTLLLSMGDLLIGWMLLRQAEV 557

Query: 541 THCMLHGR 548
               L   
Sbjct: 558 ALAALDAG 565


>gi|320173296|gb|EFW48502.1| Acyl-CoA dehydrogenase [Shigella dysenteriae CDC 74-1112]
          Length = 383

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      L
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERISGGTDEIMIYVAGRQL 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|319948249|ref|ZP_08022403.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319438081|gb|EFV93047.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 380

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 123/357 (34%), Gaps = 26/357 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           +  +    G         +                 L   L     + P++ +A+     
Sbjct: 44  IYSKMAELGWLGLTVPEEYGGSDVGAVELCLLLEHSLRG-LAPIGGIGPTLITAAAYQKF 102

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    +     + +                 + + ++E   G+D+AA+  + ++  D  
Sbjct: 103 GTEEQRRRALELVVNGG--------------TLSISMSEPGAGSDVAALRCKAERDGDDW 148

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  W  ++  +D  +++A+ +        +          GL    ++  +G +  
Sbjct: 149 VINGQKTWCSNAHFADRILLVARTDSSGKKHEGITMFDVPADIEGLQITGIET-MGGKEV 207

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
              +L F++       ++G++      +        L  A M +   + +  + + + + 
Sbjct: 208 N--DLYFTDVRLPADSVIGEVGGGWAQLMTGLNTERLILAAMQLGVAQRAFDDCLTFIKE 265

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    V++  +AD+A +I A   L + +A   DEA       A     A + K
Sbjct: 266 REQFGRPVGSFQVLRHRMADLATEIEATRLLVYAVARKVDEADPT----ALFPREASMAK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +++  V  E M+ +GG GY  E  + R  R++  ++I  G+       +   L
Sbjct: 322 LKASELSKRVTLECMQSMGGYGYATEYGMERLVRQAVVSTIYGGTNEVQRDIIGKTL 378


>gi|15839783|ref|NP_334820.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|13879912|gb|AAK44634.1| glutaryl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
           CDC1551]
          Length = 396

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 139/424 (32%), Gaps = 38/424 (8%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P  +   L    E  +  T +     A + TP + A+   G+        P   
Sbjct: 9   ALDRDDPLGLDASLSSD-EIAVRDTVRRF--CAEHVTPHVAAWFEDGDL-------PVAR 58

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    GL                 + +    L          +      +   +A 
Sbjct: 59  DLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIAS 118

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + +               +    GLTE   G+D AA+ ++ ++    
Sbjct: 119 FGSDEQKRQWLPGMATG-------------DLLGCFGLTEPDVGSDPAAMKTRARRDGPD 165

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                G  W  +  ++D  I+ A  +  +  F+VP         G     + +K+  R++
Sbjct: 166 WVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPT-----DTPGFTANTIGHKLSLRAS 220

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            T EL   N        L  +TG    +  L          ++   R +   A+ YAR+R
Sbjct: 221 ITSELVLDNVRLPADAMLPGATGLRAPLACLSEARYGIVWGAMGAARSAWQCALDYARQR 280

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + +  + D+A+++     LS  L    D    R ++ ++        K 
Sbjct: 281 TQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFG-------KL 333

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              + A  +   A   +GG+G   E  + RH     +     G+   M   VL     G 
Sbjct: 334 NNTREALKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGL 392

Query: 463 NLFE 466
             F 
Sbjct: 393 AAFR 396


>gi|313224237|emb|CBY20026.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 110/308 (35%), Gaps = 30/308 (9%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      + P I   E             +   L +TE   G+D+  I +   
Sbjct: 132 PYICSYGTDEQVDRYVPGIRDGE-------------IISCLCMTEPGSGSDVQGIKTNAV 178

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
           +  D  + L+G K F+S   M+D  I++A  +  V    + +   L D +  G    +L 
Sbjct: 179 RDGDD-WILNGSKVFISCGYMADMAIVVAVTDKNVSKAAYGISLFLVDTNLPGFEKGKLL 237

Query: 277 NKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
            KIG  S  T EL F++        L G+  V+ G    M  L    L  A+   + +  
Sbjct: 238 KKIGRASADTAELFFNDVRLPGNAVLGGEEGVNRGFQFLMHDLGRERLLVAMGCTAQLEK 297

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y   R   G  LI+   ++  +A++  +      +  R     D+        
Sbjct: 298 GFELTRQYVHEREAFGKPLINNQQVRHTLAEVKTE-----CMVLRAIT--DKHIEAYANG 350

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              +    + KY+  +       +  +  GG GY+ E  IA+ +  +   SI  G+   M
Sbjct: 351 DLDQQSVSMLKYYVSEKMIENTTKLQQLWGGYGYMLEYPIAQMFAGARVESIYAGTTEIM 410

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 411 KELIARTL 418


>gi|291296491|ref|YP_003507889.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290471450|gb|ADD28869.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 404

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 126/369 (34%), Gaps = 28/369 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL---YLMAQLEAGHLMSP 154
           +   A   L+R     G             V +Q        +       Q  A    + 
Sbjct: 38  DTDQACRRLVRLLGAGGWTRYAVGGQAYGGVHEQIDTRAVCLIRETLAYHQGLADFAFAM 97

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               +  + L  +P     +               P+ +        L+E   G+D+ A+
Sbjct: 98  QGLGSGAITLHGSPEQKARYL-------------GPVARGESIAAFALSEPEAGSDVGAL 144

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +             W  +  ++D +++ A+  G  G   +   + +    GL    
Sbjct: 145 CTEARAEGGDYILNGQKTWISNGGIADFYVVFARAPGSQGAKGISAFVVEAGTPGLEVAE 204

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
               I         L F +        L     G    M+ L       A  ++   R +
Sbjct: 205 RLEVIAPH--PLARLRFEHCRIPARQRLGEEGQGFKIAMQTLDIFRTSVAAAALGFARRA 262

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA+  A  R + G  L D  + +  +AD+A+ I AA  L++R A   D+ +  ++EAA
Sbjct: 263 LDEALFRATTRPLFGQTLADFQLTQARLADMAVKIDAAALLTYRAAWLRDQGQRVTQEAA 322

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A++ A        + A  VI  A++  GG G    + +   YRE  A  I  G+     
Sbjct: 323 MAKLTA-------TEYAQQVIDGAVQLWGGLGVTRGQVVESLYREIRALRIYEGASEVQQ 375

Query: 452 LDVLNLLEK 460
           L +   L K
Sbjct: 376 LIIARELLK 384


>gi|255036399|ref|YP_003087020.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254949155|gb|ACT93855.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 387

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 132/373 (35%), Gaps = 36/373 (9%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTS 158
            P +  L+ +    G+        +        ++ +    +          +   S   
Sbjct: 45  FPQY--LIPKFGELGVFGPTIPAEYGGGGLDYTSYGLMCQEIERGDSGMRSTVSVQSSLV 102

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    + + PK+ + E+                 GLTE   G++   + +  
Sbjct: 103 MWPIFAFGSEEQKRKYLPKLATGEW-------------LGCFGLTEPDHGSNPGGMQTNI 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            K   G        W  ++P +   ++ A+ E       V  ++ +    GL    + NK
Sbjct: 150 VKTDGGYLLNGSKMWISNAPFAQIGVVWARNEEGR----VQGVIVERGMEGLSTPEIHNK 205

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334
              R++AT EL F N    L+ + ++  G +     L  LD A   ++   +  A     
Sbjct: 206 WSLRTSATGELVFDNV---LIPETHILPGALGLKAALQCLDKARYGIAWGAIGAAVDCYD 262

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ Y+  R      +    + ++ +A++  +I  A  L++RL    D  ++ + + + A
Sbjct: 263 TAVKYSAERIQFDKPIGAFQLTQKKLAEMLTEITKAQLLAWRLGQLMDAGEATTVQISMA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +           +MA  V  EA + +G  G   E  I RH     +     G+ +  +L 
Sbjct: 323 KR-------NNVEMALNVAREARQVLGAMGITGEFPIMRHMMNLESVITYEGTHDIHLL- 374

Query: 454 VLNLLEKGTNLFE 466
           +L     G   F+
Sbjct: 375 ILGAEITGIGAFK 387


>gi|260578533|ref|ZP_05846444.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258603317|gb|EEW16583.1| glutaryl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 388

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 128/361 (35%), Gaps = 39/361 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+H   ++    P     A+ +    +  +       +      +   +    +    
Sbjct: 61  ALGMHLEGYE---CPGASAVAYGLACMEIEAVDSGLRSFVSVQGSLAMFAIHHWGSEEQK 117

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PK+ + EY                 GLTE   G+D A++ ++  +  D        
Sbjct: 118 EKYLPKMAAGEY-------------LGCFGLTEPDAGSDPASMKTRATRDGDEWVLNGTK 164

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D  ++ A+ E     F++ + +E     G     +  K+  R++ T E+  
Sbjct: 165 MWITNSPVADVAVVWARTEDGFAGFILEKGME-----GFTAPEIHKKLSLRASITGEIVL 219

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVS 345
            N        L      ++ ++  L  L+ A   +        R SL  AI Y   R V 
Sbjct: 220 DNCRVPDSQRLPK----IDTLRGPLTCLNEARYGIIWGALGAARDSLETAIDYTETREVF 275

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L    + +  +A++++++  +  L+ +L    D+ +        A     + K    
Sbjct: 276 GKSLSSYQLTQAKLANMSVELNKSVLLALQLGRLKDKGE-------LAPHQVSVGKLNST 328

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           ++A  +  E    +G SG   E S  RH     +     G+   M   ++     G   F
Sbjct: 329 RVALEIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTAE-MHQLIIGQALTGKGAF 387

Query: 466 E 466
            
Sbjct: 388 R 388


>gi|225709870|gb|ACO10781.1| Probable isovaleryl-CoA dehydrogenase [Caligus rogercresseyi]
          Length = 416

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 131/371 (35%), Gaps = 26/371 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+    +PA H + +     GL        +        + +           E G +  
Sbjct: 60  WESQGQYPA-HEVFKILGSAGLLGVSKPVEYGGSGLDFKYTVALNE-------ELGKISC 111

Query: 154 PSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             V  +  V   M+TP +      +  S E       P  K      LG++E   G+D+A
Sbjct: 112 GGVPMSIAVQTDMSTPAL-----SRFGSHELKKQFLEPSIKGDYVSCLGVSEPGAGSDVA 166

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGL 270
           +I +  ++  D +       W  +   +D   +LA  E +          +       G+
Sbjct: 167 SIRTNARRNGDDLLINGSKMWITNGLQADWMCLLANTEDQESNPHRNKSLICLPMDTPGI 226

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
              +   KIG   + T E+ F +        +     G    M       + +A + +  
Sbjct: 227 TIAKKIEKIGMLCSDTAEIYFEDVRVPQSYIIGKPGQGFTYQMLQFQEERIAAATLCLGP 286

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +   L E I Y R R      ++D   ++  +A++A ++    +  +R  +++   +   
Sbjct: 287 LERMLEETIEYTRNRKAFKSTILDNQYVQFKLAELATEVELLRSGVYRTTDAYLAGQD-- 344

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++A + K  C ++        ++  GG G+     I+R +R+    SI  G+ 
Sbjct: 345 -----VTLLASMLKLKCGRLIRETSDTCLQFWGGMGFTSSVGISRAFRDFRLISIGGGAD 399

Query: 448 NAMVLDVLNLL 458
             M+  +  L+
Sbjct: 400 EVMLSIISKLM 410


>gi|255264015|ref|ZP_05343357.1| isobutyryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
 gi|255106350|gb|EET49024.1| isobutyryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
          Length = 561

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 139/391 (35%), Gaps = 50/391 (12%)

Query: 94  WDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            DK+E H   WH         ++      G+        F      +A     +      
Sbjct: 193 VDKIEPHAHDWHLKDELIPMEVINELAEMGVFGLTIPEEFGGFGLSKASMCVVSEELSRG 252

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T    + W P++ S E  PT                TE
Sbjct: 253 YIGVGSLGTRSEIAAELILCGGTNEQKQKWLPQLASAETLPTAV-------------FTE 299

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D+ ++ ++  +  D         W   +  +    +LA+ +        +   L 
Sbjct: 300 PNTGSDLGSLRTRAVRDGDDWTITGNKTWITHATRTQVMTVLARTDPDTTDYNGLSMFLA 359

Query: 264 DGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK 313
           + +P          G+    ++  +G R     EL F    GF +   N+  G   +  K
Sbjct: 360 EKTPGTDDNPFPTPGMTGGEIE-VLGYRGMKEYELAFD---GFEVKGENLLGGVTGKGFK 415

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            L+       + +A  ++     +L  ++ YA  R   G  LI+ P +   +A +A++  
Sbjct: 416 QLMETFESARIQTAARAIGVAASALDVSMQYAIDRKQFGQSLINFPRVSGKLAMMAVETM 475

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  L++  A   D  +    EA  A+++         ++A A     ++  GG+G+  E
Sbjct: 476 IARQLTYFSAEQKDSGERCDIEAGMAKLL-------GARVAWACADNGLQIHGGNGFALE 528

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             I+R   ++   +I  G+       +   L
Sbjct: 529 YKISRILCDARILNIFEGAAEIQAQVIARRL 559


>gi|221128011|ref|XP_002154177.1| PREDICTED: similar to acyl-coa dehydrogenase, partial [Hydra
           magnipapillata]
          Length = 327

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 128/344 (37%), Gaps = 32/344 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QE+ R A  +  Q   + P   +W K    P       ++ H GL          P  
Sbjct: 5   QDQEMIRDAVRDFAQAELW-PNAAKWGKEHTFP-------KAAHQGLAALGAYGICVPEE 56

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS------MVALMTTPRVHKDWAPKIFSRE 182
              A         ++ ++ AG   + +V S +      ++      +  K W        
Sbjct: 57  LGGAGLDYVTLALVLEEIAAGDGGTSTVISVTNCPVNAILMKFGNAQQKKQWLE------ 110

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-D 241
                  P+ +  +     LTE   G+D +++ +   +  D  Y ++G K F++S  + D
Sbjct: 111 -------PLAQGQMLGAFCLTEPHVGSDASSLRTTALRQGDE-YVINGVKQFITSGKNGD 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298
             I++A  +   G   +   L   +  G    RL++K+G  S+ T ++ F N       L
Sbjct: 163 VAIVIAVTDKAAGKKGMSAFLVPTNAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G      G          +  A  SV   R +L  AI YA+ R   G  + +   +   
Sbjct: 223 IGKEGEGYGIALGGLEGGRIGIAAQSVGMARSALDVAIAYAKDRQSFGQPIFNHQAVGFR 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           +AD A  + AA  L +  A   D  +   +EAA A++ A     
Sbjct: 283 LADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFASEMAE 326


>gi|83311687|ref|YP_421951.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
 gi|82946528|dbj|BAE51392.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1]
          Length = 394

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 133/376 (35%), Gaps = 36/376 (9%)

Query: 101 PAWHALLRRSI----HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSP 154
           PA     RR +      G   +    ++    +    +       ++A+    A    + 
Sbjct: 43  PAMDQTARRLVTALGQAGFLKAAIPAAYGGRAKDFDVRALCLGREILARHAGLADFAFAM 102

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               ++ + L         + PK+ + E                   ++E   G+D+ A+
Sbjct: 103 QGLGSAAITLFGNAEQQARYLPKVGTGEM-------------IAAFAISEADAGSDVGAM 149

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++     D         W  ++ ++D + + A++    G   +   + D    GL    
Sbjct: 150 TTKAVLDGDHYVIDGAKTWISNAGLADFYTVFARIGDGEGAKGLAAFVVDARTPGLSVSE 209

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGM 328
             + +         L F N         N+   P +  K+ +             ++   
Sbjct: 210 RIDVMAPH--PLGSLRFDNMRVPA---ANLLGKPGDGFKVAMSVLDVFRTTVGAAALGFA 264

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R ++ EA+  + +R   G  L D  +++  IAD+A+ +  +  L +R A   D       
Sbjct: 265 RRAMDEAVSRSVKRKAFGSRLADFQLIQAKIADMAVAVDTSALLIYRSAWVKDT------ 318

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +       A + K W  + A  VI +A++  GG G I   ++ + YRE  A  I  G+  
Sbjct: 319 KGGRVTREASMAKLWATEQAQMVIDQAVQIWGGLGVISGMAVEQLYREIRALRIYEGTSE 378

Query: 449 AMVLDVLNLLEKGTNL 464
              L + + + +G  L
Sbjct: 379 IQKLVIASKVYEGLTL 394


>gi|332343414|gb|AEE56748.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           UMNK88]
          Length = 383

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTSYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|149280757|ref|ZP_01886865.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149228504|gb|EDM33915.1| Acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 453

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/415 (18%), Positives = 141/415 (33%), Gaps = 40/415 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQEL-----ARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
             +  +   LG+  L    + L     A +     P ++ Y      W K EF      L
Sbjct: 64  PPIEGDFYHLGDEALKDEDRALQLKVRAFLEKEVKPVVNKY------WLKAEFP---FEL 114

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           + R     +    +     P        I A  L  +    +      S  +   + L+ 
Sbjct: 115 IPRIAELDICGLTYKGYGCPNKSNLMEGILAMELARVDTSMSTFFGVQSGLAMGSIYLLG 174

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGI 225
           +    + W P              MQK +     GLTE   G+  A  +T+  ++     
Sbjct: 175 SEAQKQQWLPG-------------MQKMTTIGAFGLTEPEVGSGAAGGLTTTAKRQGSKW 221

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 KW  ++P SD  I+ A+             L      G   +++ +K+  R   
Sbjct: 222 ILNGQKKWIGNAPFSDVTIIWARDLDDQQVKG---FLVRKGTKGFEVEKMMDKMALRIVQ 278

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
              +  +N        L  +    +  K+  +     A  +V   R +   A+ Y R R 
Sbjct: 279 NGLITLTNCEVDEEDRLQNANSFKDTAKVLQMTRAGVAWQAVGCARGAYESALQYTRTRK 338

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +++  + ++  ++ A   L FRL+   D+     E A+ A       K +
Sbjct: 339 QFGRPIASFQLIQNHLVEMLSNLTAMQTLCFRLSQLQDQNMLTDEHASLA-------KVF 391

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           C      V++ A E +GG+G + E  +AR   ++ A     G+     L V   +
Sbjct: 392 CSMKTRDVVSRAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEINTLIVGRAI 446


>gi|254819183|ref|ZP_05224184.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 400

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 122/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVA 163
            L   +   GL      + +  +       +  A       L       + +  +  ++ 
Sbjct: 48  DLRDEAKRMGLFGYAIPQEWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLV 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W   I S               V     LTE   G++ A + ++  +  D
Sbjct: 108 GFGTDEQKSRWLESIASG-------------DVVASFALTEPGAGSNPAGLRTKAVRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   ++  ++P+++ F++ A+          +   L      G+       K+G  
Sbjct: 155 NWVISGQKRFITNAPVANLFVVFARTRPADDKGPGIAVFLVPADAAGVQVGAKDAKMGQE 214

Query: 283 SNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
              T ++ F +        + G  ++             +  A ++V   + +L E++ Y
Sbjct: 215 GAWTADVAFDDVRVDDAALIGGSEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVAY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A      G  +    +++  +AD    + A  AL    A  +   + R       RI   
Sbjct: 275 AATATQGGAEIGSFQLVQAMLADQQAGVMAGRALVRDAARLWVTDQDR-------RIAPS 327

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++  GGSGY+   ++ R YR+     +  G+     L + + L
Sbjct: 328 AAKLFCTEMAGNVADLAVQIHGGSGYMRGVAVERIYRDVRLLRLYEGTSEIQRLIIGSNL 387

Query: 459 EKGTN 463
            K   
Sbjct: 388 VKAAA 392


>gi|296138435|ref|YP_003645678.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026569|gb|ADG77339.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 606

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/541 (17%), Positives = 192/541 (35%), Gaps = 75/541 (13%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELA---RMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
             +     +  +   +       ++L+   R A+ + P +   GP G     V   P   
Sbjct: 34  ERYAEHSRETFDAALDLAAEVAVKKLSNHYREADAHEPTV---GPDG----TVVTLPETA 86

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++     GL           +                A L        ++ + +++  
Sbjct: 87  EGIKAIFDSGLLTGEIPAEEGGIGLPSVVAKATFAWLNAANLPTAVYTGLTMGNVNVIRS 146

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + +               PM +      + L+E   G+ +A IT++ ++  DG
Sbjct: 147 FGTDEQKRLYVE-------------PMMEGRFTGTMCLSEPEAGSALADITARAERREDG 193

Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPN 268
            Y ++G K +++    +       ++LA+V G       +  F+VP+ L +     G  N
Sbjct: 194 TYAITGTKMWITGGDHEMTENIVHLVLAKVPGSPDGVKGISLFIVPKYLVNDDTSVGERN 253

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---------TFGFLLGDLNVSTGPVEDMKILIYLD 319
            +    L +K+GN+      L F +           G+L+G  N     +  M     + 
Sbjct: 254 DVTLVGLNHKMGNKGTTNCLLAFGDGTHPQPGGGATGYLVGTENRGLIQMFQMMNEARIA 313

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAAT 370
               + S    +  +++ YAR R               +I+   ++R +           
Sbjct: 314 VGYTASSIAYTAYLQSLEYARSRVQGRPVTALDGPQVPIIEHADVRRMLLAQKSFAEGGL 373

Query: 371 ALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           AL+   A   DEA + ++EA       +   + PI K W  +        A++  GG GY
Sbjct: 374 ALTLYAARLIDEANTAADEAGKVAAEQFLDFLTPIIKSWPSEFGLKANEYAIQIHGGYGY 433

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKK 482
             + ++ + YR++  N+I  G+     LD+L     + G   F  L   +E    ++   
Sbjct: 434 TRDYNVEQLYRDNRLNAIHEGAKAIHGLDLLGRKVPQHGGASFGALLGRIEAT--AARAA 491

Query: 483 VITILRDSISLCKEDKGLARFLTE--------KIALASSAAALYRAGMNDIADVFLENRF 534
            +  L D  +  +   G A  +T          ++LA++ A L   G   +A ++L+   
Sbjct: 492 DVPELADLAAQLRAASGRALEVTMAVGGAGDPALSLANATAYLDGLGHVVVAWLWLDQAL 551

Query: 535 L 535
            
Sbjct: 552 A 552


>gi|301105665|ref|XP_002901916.1| glutaryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
 gi|262099254|gb|EEY57306.1| glutaryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]
          Length = 420

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 127/361 (35%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ++++     G             V   ++ + A  +  +       +   S      + 
Sbjct: 76  RSIMKEMGEMGFLGPTVQGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPIN 135

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E             +    GLTE   G+D  ++ ++ +   D
Sbjct: 136 QFGSDEQKEKYLPRLATGE-------------LIGCFGLTEPNHGSDPGSMETRARLKGD 182

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  ++P++D F++ A+ + G +  F++     +    GL    ++ K    
Sbjct: 183 KYILNGSKNWITNAPIADVFLVWAKDDEGDIRGFIL-----EKDFPGLSAPYIEGKATLL 237

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++AT  +   +        L    G          L+SA   +S   +  A A       
Sbjct: 238 ASATGMIFLEDVEVPKENMLPKVKGLK---GPFTCLNSARYGISWGALGAAYACMDIARQ 294

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R+  G  L    ++++ +AD+  +IA       ++    DE K+  E       + 
Sbjct: 295 YTLDRNQFGAPLAANQLIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVE-------LI 347

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  +   A + +GG+G  +E  I RH     A +   G+ +   L +   
Sbjct: 348 SMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRA 407

Query: 458 L 458
           +
Sbjct: 408 I 408


>gi|157429080|gb|ABV56602.1| acyl-CoA-like dehydrogenase [Kutzneria sp. 744]
          Length = 385

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 147/394 (37%), Gaps = 43/394 (10%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A    P   A+   G          A   + R +   GL                 ++ +
Sbjct: 22  ARRIAPHYAAWERRGV---------ADREVWRAAGAAGLLGIDMPAEHGGGGSDD-YRFQ 71

Query: 137 AARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           A     +A+        P       S +  + T    + W P   S              
Sbjct: 72  AILSEELARAGTYAPCLPLHNEIVGSYLRTLATAEQQRRWLPGFCSG------------- 118

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA------ 247
            +   L +TE   G+DI+A+ +      DG + L+G K F+S+   +D ++++A      
Sbjct: 119 DLVTALAITEPDAGSDISAMRTTAV-GRDGGWQLNGSKTFVSNGHSADLYLVVALTPTDT 177

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-ST 306
           +            L+ +    G+   RL +KIG ++  T EL F +        L     
Sbjct: 178 RTAAPARGTSASMLVVEADRAGVKRGRLIDKIGMKALDTSELFFDDVAVPARNLLGRPGR 237

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                M+ L+   +   I +++     LAE + Y  +R V G  +      +  +A++A 
Sbjct: 238 AFGYLMRNLVQERMWIGISALAAAERVLAETLEYVGKRSVFGMAVGQHQSNRHHLAELAT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            +  A +   R   ++++ +  +E+AA         K+W  ++   V+ + ++  GG G+
Sbjct: 298 AVEVARSHCDRAILAYNDRRLSAEDAAM-------VKWWNTELCQQVVTQCLQLHGGYGF 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + E  +AR Y ++   +I  G+   M   + + L
Sbjct: 351 VRESVVARAYLDTRVQTIYGGTTEVMKEIISHSL 384


>gi|118619222|ref|YP_907554.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium ulcerans Agy99]
 gi|183984132|ref|YP_001852423.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium marinum M]
 gi|118571332|gb|ABL06083.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium ulcerans Agy99]
 gi|183177458|gb|ACC42568.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium marinum M]
          Length = 391

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 133/367 (36%), Gaps = 31/367 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++      ++          ++  +      +     M      
Sbjct: 43  YPQAWIEQMKR---IGIYGLAIGEAYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 99

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T      + P + + E   T             + LTE  GG+D+  +++  
Sbjct: 100 AKLLMLFGTDEQKSTYLPAMATGELRAT-------------MALTEPGGGSDLQNMSTTA 146

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
                    ++G K ++S+      I +L + +         +  +L +  P GL     
Sbjct: 147 MADGPDQLLITGAKTWISNARRSGLIALLCKTDPHATPRHHGISIVLVEPGP-GLNISAD 205

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +     EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 206 LPKLGYKGVEACELSFDNYRAPTSAILGGQPGQGFSQMMKGLETGRIQVAARALGVASAA 265

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA++RH  G  +     +   +AD+A  + AA  L+   A  +D  +    EA 
Sbjct: 266 LDDALAYAQQRHSFGQPIWKHQAIGNYLADMATKLTAARQLTHYAAQRYDSGQRCDMEAG 325

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 326 MA-------KLFASETAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 378

Query: 452 LDVLNLL 458
             +   L
Sbjct: 379 NVIARQL 385


>gi|239815898|ref|YP_002944808.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239802475|gb|ACS19542.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 617

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/557 (17%), Positives = 190/557 (34%), Gaps = 95/557 (17%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
             F     +  + + +      A+E    AN        +       +KV    A H   
Sbjct: 24  ERFSDHSRETFDAVLDTC-ERIAREKYAPANRIVDTQEPH----FDGEKVVLPQATHDAH 78

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +  +  G+  +  D     +      +  A   + MA +  G  M  +  +A+++ +  T
Sbjct: 79  KAFVESGMMSAAQDYDIGGMQLPYTLQAAANSFFAMASVSIGSNM-LTSGNANLLMVHGT 137

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-- 225
               + +A   FS  +  T             + L+E + G+ ++ + ++     DG   
Sbjct: 138 EMQKEVFAKNEFSGRWAGT-------------MCLSEPQAGSSLSDVATRAVPDGDGYQG 184

Query: 226 ------YCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLED 264
                 Y L+G+K ++S+   +       I+LA++             +  F+VP+ + +
Sbjct: 185 DPLGPRYRLTGNKMWISAGDHELTENIVHIVLAKIPDANGKLVPGTRGISLFIVPKRMVN 244

Query: 265 ------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNVSTGP 308
                 G  N +    L +K+G R      L F              G+L+G+       
Sbjct: 245 TQGELTGERNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVGGKAGAVGYLVGEPGKGLHC 304

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------------------- 347
           +  M     +     +          ++ YA+ R   G                      
Sbjct: 305 MFHMMNEARIGVGTAATMLGMAGYYASLDYAKTRPQ-GRLVKKAEQPGTAVAKDSASPQV 363

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKY 402
            +I+   ++R +         A AL    A   DE K+   +AA        ++ PI K 
Sbjct: 364 RIIEHADVRRMLLAQKAYCEGALALELYCARLVDEQKTGDAQAADDARLLLEVLTPIAKS 423

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLE 459
           W  +      + A++  GG GY  +  + +++R++  N I  G+      D+L    L+E
Sbjct: 424 WPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLME 483

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK----EDKGLARFLTEKIALASSAA 515
           KG  L + L   + + +G + K                   +   A + T   A A + A
Sbjct: 484 KGRGL-QLLGGRIAETIGHAAKVPALAAHARALDAAWQRIVNATQAAWSTGDPADALANA 542

Query: 516 A--LYRAGMNDIADVFL 530
              +   G   +A ++L
Sbjct: 543 VPYMQAFGHTVLAWIWL 559


>gi|163794769|ref|ZP_02188739.1| hypothetical protein BAL199_27456 [alpha proteobacterium BAL199]
 gi|159180042|gb|EDP64567.1| hypothetical protein BAL199_27456 [alpha proteobacterium BAL199]
          Length = 393

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 127/392 (32%), Gaps = 38/392 (9%)

Query: 79  YNTPQLHAYGPGGER-----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           ++    +              D  +   +   L+      G    +   S      K   
Sbjct: 15  HHAELANGIDAWARENVAGLIDHHDVDGSCRRLVAALADAGWLDLVVPASHGGWYPKLDV 74

Query: 134 KIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +       ++      A    +        ++L  T      W P             P+
Sbjct: 75  RSLCLAREILGYHAGLADFSFAMQGLGTGSISLFGTDAQKDRWLP-------------PV 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE 250
           ++        L+E   G+D+AA+T+      +    + G K ++S+  ++  +++  +  
Sbjct: 122 REGRSIAAFALSEPDAGSDVAAMTTTATPDGNDHLRIDGEKTWISNGGIAGHYVVFVRTG 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
              G   +   + D    GL        I         L F+     +    N    P E
Sbjct: 182 EAPGARGLSAFVVDADTPGLEIAERIEVIAPH--PLARLRFNGCRIPVS---NRLGQPGE 236

Query: 311 DMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
             K+ +             ++   R  L EA+    +R + G  L D  + + A+AD+A 
Sbjct: 237 GFKVAMATLDVFRATVGAAALGFARRGLDEALDRVAKRRMFGAPLADLQMSQAALADMAT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L +R A + D        AA     A + K +  + A  V+  A++  GG G 
Sbjct: 297 EVDAAALLVYRAAWAKDSG------AARVTREASMAKLYATEAAQRVVDRAVQLHGGLGV 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                +   YRE  A  I  G+     + +  
Sbjct: 351 TTGVKVEELYREVRALRIYEGASEVQKIVIAR 382


>gi|260427439|ref|ZP_05781418.1| glutaryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260421931|gb|EEX15182.1| glutaryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 406

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 148/431 (34%), Gaps = 40/431 (9%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            +  L +     P +   +LE   E +++ +A+  A+  +   P++         + + +
Sbjct: 11  DNPALASFSWEDPFLFDAQLEED-ERMIAESARAFAQ--DKLLPRVE------HAYMEEQ 61

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVT 157
             P   A +      GL        +  +          AR           +MS  S  
Sbjct: 62  TDPEIFAEMG---AQGLLGVTVPEQYGGIGAGYVSYGLVAREVERVDSGYRSMMSVQSSL 118

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +    + + PK+ S E+                 GLTE   G+D A + ++
Sbjct: 119 VMYPIYAYGSEAQREKYLPKLASGEW-------------IGCFGLTEPDAGSDPAGMKTR 165

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             K   G        W  ++P++D F++ A+ E   G   +   + +    GL   ++  
Sbjct: 166 AIKTEGGYRLKGAKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPKIGG 223

Query: 278 KIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+  R++ T E+   +       LL ++    GP   +        A   +        +
Sbjct: 224 KLSLRASITGEIVLDDVEVGEEALLPNVEGLKGPFGCL-NRARFGIAWGVMGAAEFCWMQ 282

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R      L    + ++ +AD+  +IA     + R+    D AK+       A 
Sbjct: 283 ARQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGLQAALRVGRLMDSAKA-------AP 335

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +
Sbjct: 336 EMISLIKRNNCGKALDIARMARDMHGGNGIQIEYGVMRHAANLETVNTYEGTHDVHAL-I 394

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 395 LGRAQTGLQAF 405


>gi|331663175|ref|ZP_08364085.1| putative acyl-CoA dehydrogenase [Escherichia coli TA143]
 gi|331058974|gb|EGI30951.1| putative acyl-CoA dehydrogenase [Escherichia coli TA143]
          Length = 380

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  +             D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPTDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|307726735|ref|YP_003909948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587260|gb|ADN60657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 380

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 128/360 (35%), Gaps = 32/360 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGHLMSPSVTSASM 161
              L +R    GL        +  +    +   +      L+A      L        + 
Sbjct: 42  MRELTQRIAEFGLPGCTIPVEYGGMG--WSFTTQGMLFEELVACSCDVALCVMLNMGLAS 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + +   P V   + P   +               +   + ++E   G+++A + ++  + 
Sbjct: 100 MLVNARPEVRARYMPDCLAG-------------KIFGSICISEPDVGSNVAELKTRAVRD 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  +   SD  I   +     G   +  +L D + +G    R   KI  
Sbjct: 147 GDHFIINGEKTWITNGVYSDVLICTVR-----GDKGLSHILIDRNEHGYE-SRNIEKIAL 200

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            S +T ++  ++        +     G    MK+          +SV  MR +L E+I Y
Sbjct: 201 SSQSTAQIFITDARVPATNLIGEEGDGLRNTMKVFETARAHVGTLSVGIMRAALEESIAY 260

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G ++    ++   IA++A+ + AA  +  R+    D       +A+ A     
Sbjct: 261 ATQRKQFGKLIAAHQLIAAKIANMAIMVDAARLMCQRVFGLIDAGVRCDMQASMA----- 315

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  + A  V  +A++  GG+G  +E ++ R  RE+    I  G+     L +   L
Sbjct: 316 --KAFATEAAVQVCRDAVQLHGGNGITKEFNVERLLREAIIIPIPDGTTEIQQLIISRAL 373


>gi|290962177|ref|YP_003493359.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651703|emb|CBG74828.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 408

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 44/394 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + +            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKVGIYSLDFYAQQYFDPTGLGIPM--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++                       +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG----------DADDVKVAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+A++ ++       D         W  +  +++  +++A V+  +G       +   
Sbjct: 135 GSDVASMRTRAVYDEAKDEWVLNGTKTWATNGGIANVHVVVAVVDAHLGSKGHASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--------------VSTGPVED 311
           +  GL   +   K G R++ T E+   N        L                +    E 
Sbjct: 195 NTPGLSQGQKFKKHGIRASHTAEVVLENVRVPGSCLLGGKEKLDERLARARERAKAGGER 254

Query: 312 MKILI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           +K                M+V   R +   A+ YA+ R   G  +ID   +   +AD+  
Sbjct: 255 VKNAAMATFEASRPAVGAMAVGTARAAYEVALDYAKTREQFGRPIIDNQGVAFQLADMRT 314

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  L +R +      +  +            +K +  + A  V A+A++ +GG+GY
Sbjct: 315 SVDAARLLVWRASWMAINGRPFTAA------EGSQSKLFASETAKKVTAQALQILGGNGY 368

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R+S   +I  G+     L +   L
Sbjct: 369 TREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 402


>gi|264677855|ref|YP_003277761.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208367|gb|ACY32465.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 392

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 139/384 (36%), Gaps = 29/384 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++ E  PA H + +     GL       ++       ++ +      +MA
Sbjct: 20  EKINPHVDEWEQEEIFPA-HQVFKGLGDLGLLGLTKPEAYGGSGLDYSYSL------MMA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +  +   M TP + +  +  +          AP     +   +G++E
Sbjct: 73  ETLGHIRCGGVPMAIGVQTDMCTPALARFGSDAL-----RDQFLAPAIAGDMVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D++ I S  +K  D         W  +S  +D   ML              ++  
Sbjct: 128 PGAGSDVSGIKSHARKDGDDYIISGQKMWITNSIQADWMCMLVNTGDGPVHKNKSLIMVP 187

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
                      G+   +   KIG  S+ T  L F          +     G +  M+   
Sbjct: 188 LREGPRGKLTRGVEVAQKLRKIGMNSSDTGLLFFDEVRVPQRYLVGQEGQGFIYQMQQFQ 247

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L ++   +  M   + + I +A++R + G  LIDQ  ++  +A++  ++ A  AL++
Sbjct: 248 EERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAELQTEVEALRALTY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A  +   +        A  +A + K    ++   V    ++  GG G+  +  ++R Y
Sbjct: 308 RAAQMYMAGQD-------ALQLASMAKLKSGRLTREVADTCLQFWGGMGFTWDNRVSRLY 360

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+    SI  G+   M+  +   +
Sbjct: 361 RDGRLGSIGGGADEVMLGIIGKTM 384


>gi|241663084|ref|YP_002981444.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia
           pickettii 12D]
 gi|240865111|gb|ACS62772.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D]
          Length = 622

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 89/511 (17%), Positives = 178/511 (34%), Gaps = 84/511 (16%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +KV   P     L      GL  +  D     +      +      +  A +        
Sbjct: 70  NKVHIIPEVKVALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFL 129

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++    TP                 T   P  +      + L+E + G+ ++ I
Sbjct: 130 TIGNANLLLAHGTPAQ-------------IETFVQPEMEGRFYGTMCLSEPQAGSSLSDI 176

Query: 215 TSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGC 255
            ++ +  +       Y L+G+K ++S+   +       ++LA++ G           +  
Sbjct: 177 VTRAEYEAESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISL 236

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NT 294
           F+VP+ L +     G  N +    L +K+G R      L F                   
Sbjct: 237 FIVPKFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRAGA 296

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------ 348
            G+L+G+ +     +  M     +   + +          A+ YAR R   G        
Sbjct: 297 IGYLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHAVDYARNRPQ-GRPVGPSGK 355

Query: 349 --------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------R 394
                   ++D   ++R +      +  A  L+   A   DE +  ++ A  A       
Sbjct: 356 DAAAAQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDAAKRAKLGLLLD 415

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           I+ PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+
Sbjct: 416 ILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDL 475

Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL--------RDSISLCKEDKGLARFL 504
           L   ++ +    F  L   ++  +G + +     L          +  L K  + L    
Sbjct: 476 LGRKVVMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAG 535

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFL 535
             ++ LA+++  L   G   +A ++LE    
Sbjct: 536 DPRVTLANASVYLEAFGHVVVAWIWLEQALA 566


>gi|121605031|ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594000|gb|ABM37439.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 394

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 127/360 (35%), Gaps = 33/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           A+ R     GL  +    ++         + + A  +  +       L   S      + 
Sbjct: 56  AIFREMGELGLLGATIPEAYGGAGLNYVCYGLVAREVERIDSGYRSMLSVQSSLVMVPIN 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + E+                 GLTE   G+D  ++ ++ +K+  
Sbjct: 116 AFGTEATKQKYLPRLATGEF-------------IGCFGLTEPDHGSDPGSMITRARKVPG 162

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ +       +   + +    GL    +  K+G R+
Sbjct: 163 GYSLSGNKMWITNSPIADVFVVWAKDDEGA----IRGFVLEKGWKGLSAPAVHGKVGLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T E+     F           G          L+SA   ++   +  AE     A  Y
Sbjct: 219 SITGEIVMDAVFCPEENAFPEVRGLK---GPFTCLNSARYGIAWGALGAAEDCFERARQY 275

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  DI+       RL    DE  +       A  +  
Sbjct: 276 VLDRKQFGKPLAANQLIQKKLADMMTDISLGLQGCLRLGRMKDEGMA-------AVEVTS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 329 IMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAI 388


>gi|300789021|ref|YP_003769312.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299798535|gb|ADJ48910.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 382

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 126/362 (34%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L       G+  +     +    +    + +        A +  G L +         
Sbjct: 40  RELFTALGKLGILGTAVPEEYGGGGQDDYRYNVVIQEECARAVVTLGGLRTHLDVVVPYF 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +      + W P + S E                 + ++E   G+D+A I +   +  
Sbjct: 100 LGLADAGQRERWFPGLASGELY-------------TAIAMSEPGTGSDLAGIATTAVRDG 146

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           D  Y L+G K F++    +D  I++A+   +       +  L+      G    R  +K+
Sbjct: 147 DH-YVLNGAKTFITGGYHADLVIVVARTSTDPGDRRHGLTLLVVAKDLPGFTVGRKLDKL 205

Query: 280 GNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G     TVEL F++    +   LG+   +   +        L   + +V+  R ++   I
Sbjct: 206 GLTVQDTVELSFADVRVPVADRLGEEGAAFSYLGRNLAQERLAITVGAVAQSRAAIDLTI 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R V G  +      K        ++AA  A         D A +       + + 
Sbjct: 266 AYVRNRKVFGQPVAHFQNTKF-------ELAAMAAELEAAQAMLDAAVTAHVAGELSAVD 318

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +C ++   V+   ++  GG GYI E  IAR Y ++  + I  G+   M   +  
Sbjct: 319 AAKAKLFCTEVQGRVVDRCLQLHGGYGYILEYPIARLYADARVSRIYGGTSEVMKTIISK 378

Query: 457 LL 458
            L
Sbjct: 379 SL 380


>gi|284167626|ref|YP_003405904.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017281|gb|ADB63231.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 146/392 (37%), Gaps = 37/392 (9%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-A 132
           A   +   P +  +   G         P    L+      GL+       +        +
Sbjct: 20  AFCDDTVRPVVEEHEREGR-------FPL--DLVDELGDAGLYGITIPEEYGGEGMDYRS 70

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
            ++    L  + ++ AG +        + +A        ++W   IF+            
Sbjct: 71  FQVAVEELSRVWKIPAGVVSLSCSLVGTSLAEFGANWQREEWLRDIFTD----------- 119

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251
             ++   + LTE + G+D AA+ +  ++  D +  + GHK + S    +D  I++A+   
Sbjct: 120 --NLVTAVSLTEPQAGSDAAALETSARRDGDEL-VIDGHKVWTSHGEVADFLIVVARTGD 176

Query: 252 RVGCFLVPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVST 306
                 V  +   +  S +GL + R    +   +    E+++          +G+     
Sbjct: 177 EGDHGDVSLIGISDPQSVDGLEFVRDIPCMEGDAVVESEVKYDGVRVPEENIIGEEGKGF 236

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +     +  + +A   V   + ++  ++ +A  R   G  + +   +   +AD+A+DI
Sbjct: 237 KYIMRALDVGRIGAAAQGVGVAQGAMDASVDFADEREQFGQPIREFQGVSFKLADMAMDI 296

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  ++   A + D+    +++A+ A       K +   +A  V  EA++  G  GY +
Sbjct: 297 QAARLMTIWAAKNLDDGNRVNKQASMA-------KTFATDVAMDVTTEAVQVHGSRGYSK 349

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  + R  RE+    I  G+       + + L
Sbjct: 350 DYPVERFMREAKGAQIYEGTNEVNRQIISDHL 381


>gi|306797293|ref|ZP_07435595.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006]
 gi|308342361|gb|EFP31212.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006]
          Length = 609

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 91/544 (16%), Positives = 188/544 (34%), Gaps = 78/544 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+     A+ N P    + P       +         ++     G   
Sbjct: 42  LAEAARLAEGPIAESFGY-ADRNPPV---FDPNTH---SISVPDELAKTVQAIKEAGWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +            +   A   A       V  A  + +       + WA +
Sbjct: 95  LGLAEEIGGMPAPPPLAWAVNEMIYCANPSACFFNLGPVL-AQSLYIEGNDEQ-RRWAAE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +  T             + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 153 GVQRGWQAT-------------MVLTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISG 199

Query: 238 PM------SDAFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                   +   ++LA+ EG       +  F VP  L D      G+ NG+    L++K+
Sbjct: 200 GDVGNTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKM 259

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+G ++     +  +     +   + S   +      A
Sbjct: 260 GLKSSPTCELTFGGADVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  ++  P ++R++           AL    A   D+A
Sbjct: 320 LAFAKERVQGADLTQMTDKTAPRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + PI K    + A  ++ E+++ +GGSG++ +  + ++ R+
Sbjct: 380 VAQRVSGADHDMAHRVDDLLLPIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL---EQDLGSSGKKVITILRDSI 491
           +  +S+  G+     LD     ++       + + + +    +++  S K    +LR ++
Sbjct: 440 AKIDSLYEGTTAIQALDFFFRKIVRDHGKALQFVLAQVTHTVENIDPSLKPQAELLRTAL 499

Query: 492 SLCKEDKGLARFLTEKIALASS-AAALYRAGMN------DIADVFLENRFLDNCHSTHCM 544
                   +   LT  +  A+  ++ +Y+ G+        + D+ +  R L      H  
Sbjct: 500 DDIT---AMTGALTGYLMSAAQHSSDIYKVGLGSVRYLLAVGDLLIGWRLLVLAWVAHAA 556

Query: 545 LHGR 548
           L   
Sbjct: 557 LADG 560


>gi|309788493|ref|ZP_07683097.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|308923875|gb|EFP69378.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
          Length = 383

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 135/362 (37%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 98  RFGSAEQLR------------KTAESTLETGDPAYALALTEPDAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D  +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADLHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIHVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|301027860|ref|ZP_07191161.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           196-1]
 gi|299879016|gb|EFI87227.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           196-1]
          Length = 373

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 134/353 (37%), Gaps = 28/353 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +          A + +        L++      SM  
Sbjct: 40  REFMRALADNGISMLGVPEEFGGIP-PDYVTQMLALMEVSKCGAPAFLITNGQCIHSMRR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             +  ++ K             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  FGSAEQLRK-------------TAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 369


>gi|302667173|ref|XP_003025177.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517]
 gi|291189267|gb|EFE44566.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517]
          Length = 618

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/515 (21%), Positives = 194/515 (37%), Gaps = 64/515 (12%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQEL 73
           S S     Q    I       D++L  +++       P  + K+       V+S    + 
Sbjct: 4   SSSTEGFFQVQPSIQP-QIQEDAVLRRIVSLHLPSPLPPSLEKDFTRFSSPVISKPVLDF 62

Query: 74  ARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           A  A  N P L      G   + D +       AL   +I +GL     +        + 
Sbjct: 63  AAEAERNQPYLKPLSTFGIENKQDPLVTGEGRRALQDINIREGLMGLAPEPGLTGHGTQW 122

Query: 132 AHKI-RAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
             ++ +  + +L     A      S+T  +A +++        + +A      E      
Sbjct: 123 NTRVSKGIKGHLWTASSAMVTCPGSMTNGAAKLLSRHLDSENGRIFA------EALKRLT 176

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI---------YCLSGHK 232
           +     +   G  +TE+ GG+D+    +  +K         DG+         + L G K
Sbjct: 177 SHDPAIAWTSGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSVGMPLGPWRLDGFK 236

Query: 233 WFLSSPMSDAFIMLAQV-EGRVGCFLVP-------RLLEDGSPNGLCYQRLKNKIGNRSN 284
           WF S+  ++  IMLA+  E  +  F  P       +   +   NG+  QRLKNK G ++ 
Sbjct: 237 WFSSATDANMSIMLAKTGENSISAFYAPLRRQVKGKDPRESELNGVRIQRLKNKFGTKAL 296

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            T ELE     G+L+G        +  +  +    + I SVS    SLA    Y++ R  
Sbjct: 297 PTAELEIKGMRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVT 356

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--------- 395
           SG +L D P   R +A   +  AA+  L+F +      ++  S  +  A           
Sbjct: 357 SGRLLQDTPSYVRTLARDHVKYAASMHLTFFVVALLGVSEGSSSSSCMASQTNILPRDNN 416

Query: 396 --------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYRESPANSIL 443
                   + P+ K      A   +  +ME +GG GY+E       IAR +R++   SI 
Sbjct: 417 HTLALLRLLTPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIW 476

Query: 444 LGSGNAMVLDVLNLLE--KGTNLFEQLFSTLEQDL 476
            G+   M  D++ +++  KG +  + L   +   L
Sbjct: 477 EGTTEVMADDLMRVVKGSKGPDCLDALDKWVAHGL 511


>gi|294952949|ref|XP_002787528.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239902534|gb|EER19324.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 1295

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 156/347 (44%), Gaps = 21/347 (6%)

Query: 196  VAIGLGLTEKRGGTDIAAIT-SQGQK--ISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-- 250
               G  +TE+ GG+D+ A T +   +    DG++ L+G+KWF S+  +     LA+    
Sbjct: 903  WTSGQWMTERGGGSDVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLARTPDT 962

Query: 251  -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
             GR+  F +P   ++G  NGL   RLK+K+G R   T E+E + +    +         +
Sbjct: 963  NGRLDMFYLPTRDQEGKLNGLKIVRLKDKLGTRQLPTSEMELNASKAVRVTYNGRGLSMI 1022

Query: 310  EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
             ++  +  + + + + +GMR  +  A  Y+ +R   G  L + P     +A++ ++  AA
Sbjct: 1023 MNLASITRIHNTVSAAAGMRRIIQLAKDYSTKRVAFGRRLQELPAHVATLAELEVEARAA 1082

Query: 370  TALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             +L   +A      + + +  +E    R++ P++K    + A  V ++ +E  GG+G++E
Sbjct: 1083 CSLWLEMARLLGKVEASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGGAGFME 1142

Query: 427  ERSIARHYRESPANSILLGSGNAMVLDVLNLL-EKGTNLFEQLFSTLEQDLGSSGK---- 481
            +  +  H R++   +I  G+ N   +DVL ++ +        L    E  +G   +    
Sbjct: 1143 DTGLPSHLRDAQVLAIWEGTSNVQAMDVLRVITQTTGEALAALKRRFESSIGVDPRVTSL 1202

Query: 482  --KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526
              +   +LRD     +     A FL    A       +   G ++ A
Sbjct: 1203 LDQADHLLRD--EFPEPLALRASFLV---ARGVCGGLMLEHGRHEEA 1244


>gi|288932790|ref|YP_003436850.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288895038|gb|ADC66575.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 415

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 148/437 (33%), Gaps = 56/437 (12%)

Query: 35  NAYSSDSL--LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           N +  D +  L   +  F S V  EL                         L        
Sbjct: 5   NFFLDDEIVKLREEVKEFVSSVDPEL-------------------------LRKMDR--- 36

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+V++       +  +    L    +   +         +  A     +  +  G   
Sbjct: 37  --DEVDYP---FEFVEEAGKRKLLGLRFPEEYGGRNLSWLAESVAVEEVGVLGMGLGCAY 91

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        +         +++               P+ +       GLTE RGG+D  
Sbjct: 92  AMISIVGEAIYRFGQEWQKEEFLK-------------PLIRGKKIAAEGLTEPRGGSDFF 138

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
             T++ +K  +  + L+G K F++   ++D +++ A+ +    G   +   + +    G+
Sbjct: 139 GTTTKAEKKGN-KWILNGAKRFIAGGKVADFYLIYARTDPNAPGHKALTAFIVERDM-GV 196

Query: 271 CYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
             + L N +G +   T  + F N      + +G++N +      M I   L SA  +V  
Sbjct: 197 EIEDLHNLMGFKGMGTARIAFKNLEVPDEYRIGEVNGARIVFNRMMIPERLTSAAGAVGL 256

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R ++  A+ Y+ +R   G  + +   +   +A+    + AA  L +       +     
Sbjct: 257 ARAAIEIAMKYSDKRKAFGRKIREFQGVSFKVAESVAKLDAARYLVYAA-ARAADDYDAG 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           +     R      KY   +    ++  AM+ +GG GY +   + R  R+     I  GS 
Sbjct: 316 KSKVDPRRFVSEAKYLATEFGWEIVNNAMQILGGIGYTQVYPVERMLRDMRLAPIWTGSN 375

Query: 448 NAMVLDVLNLLEKGTNL 464
             M L + +   K   L
Sbjct: 376 EIMKLLIQHEAYKMLKL 392


>gi|190891898|ref|YP_001978440.1| glutaryl-CoA dehydrogenase [Rhizobium etli CIAT 652]
 gi|190697177|gb|ACE91262.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652]
          Length = 394

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 130/383 (33%), Gaps = 44/383 (11%)

Query: 98  EFHPAW------HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
             H A+        L +     GL        +        A+ + A  +  +       
Sbjct: 40  RIHDAYLEEATDPELFKLMGQTGLLGVTLPEEYGAANASYVAYGLIAREVERIDSGYRSM 99

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    +    K + P + S               +    GLTE   G+D
Sbjct: 100 MSVQSSLVIYPIFAYGSDEQKKKYLPGLVSG-------------DLIGCFGLTEPDAGSD 146

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ +KIS G        W  +SP++D F++ A+ E       +   + +    GL
Sbjct: 147 PGGMKTRAEKISGGYRLRGSKMWISNSPIADVFVVWAKSEAH--NNEIRGFVLEKGMKGL 204

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
              ++  K+  R++ T E+           LL  ++   GP         L+ A   +S 
Sbjct: 205 SAPKIGGKLSLRASITGEIVMDGVEVTEDALLPGVSGLKGP------FGCLNRARYGISW 258

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  AE     A  Y   R   G  L    + ++ +AD+  +I      S R+    DE
Sbjct: 259 GVMGAAEDCWFRARQYGLDRKQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDE 318

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K        A  M  + K   C  A  +  +A +  GG+G   E  + RH +     + 
Sbjct: 319 HK-------MAPEMVSLVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNT 371

Query: 443 LLGSGNAMVLDVLNLLEKGTNLF 465
             G+ +   L +L   + G   F
Sbjct: 372 YEGTHDVHAL-ILGRAQTGLQAF 393


>gi|291392161|ref|XP_002712608.1| PREDICTED: long-chain acyl-CoA dehydrogenase-like [Oryctolagus
           cuniculus]
          Length = 396

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 119/374 (31%), Gaps = 62/374 (16%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           V  H  W         L  ++   GL           +                +     
Sbjct: 73  VPHHSEWEKAGEVSRELWEKAGKQGLLGVNIAEHHGGIGGDLFSSAIVWEEQAYSNCTGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +A   T    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSLHSDIVMPYIANYGTEEQIKRFIPQMTAGKC-------------IGAIAMTEPGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  + +  +K     + L+G K F+++   SD  I++     E R     +   L +  
Sbjct: 180 DLQGVRTNAKKDGSD-WILNGSKTFITNGWLSDVVIVVTVTNREARSPAHGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G    +  +K+G ++                                  L  A ++VS
Sbjct: 239 MKGFIKGQKLHKMGLKAQ-------------------------------ERLLIADLAVS 267

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  E  +Y ++R   G  +     ++  +A++  +I    A         D+ +  
Sbjct: 268 AGEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTNICVTRAFVDSCLQLHDKKRLD 327

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           S  A+ A       KYW  ++   V  E ++  GGSGY+ E  IA+ Y ++    I  G+
Sbjct: 328 SAGASMA-------KYWASELQNHVAYECVQLHGGSGYMWEYPIAKAYVDARVQPIYGGT 380

Query: 447 GNAMVLDVLNLLEK 460
              M   +   + +
Sbjct: 381 NEIMKELIARDIVR 394


>gi|262198234|ref|YP_003269443.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081581|gb|ACY17550.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 387

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 133/360 (36%), Gaps = 31/360 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVAL 164
           LLR     GL                   +        +    A   ++ S+   + +  
Sbjct: 50  LLRELGKLGLLGITIPEEAGGAGMDAVASVLVHEELSYSDPGFALAYLAHSLLFVNNLYF 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    + P+  + E+                +G+TE   GTD+  + +  ++  DG
Sbjct: 110 AANDEQRARYLPRTLTAEH-------------VGAMGMTEPAVGTDVLGMRTSARRTDDG 156

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y LSGHK F+++ P ++ F++ AQ++ R+  F+V R       +G        K+G R+
Sbjct: 157 -YVLSGHKTFITNAPEAEVFVVYAQLDKRLTTFVVER-----GMSGFSVSDKIPKMGMRA 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +   EL F +        L    G + +M     +  L  A MS+      L   + Y+ 
Sbjct: 211 STMAELVFEDVRVPAANLLGKEGGGITNMMRNLEIERLGLAAMSLGIANRCLDVMVRYSS 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + D   ++R I +    + A   L + +A +           +  R+     
Sbjct: 271 EREAFGKPISDFGQIQRYIGESYAKVEAIRGLLYGVARTVSHG-------SRNRLGTDAV 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +    A  V   A++ +GG GY  E  + +  R++    I  G+  A   ++   L K
Sbjct: 324 KLFAATAAKEVADAAVQVLGGYGYCAEYRVEQFLRDAKLIEIGGGTIEAHQKNITRDLIK 383


>gi|256113639|ref|ZP_05454454.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|265995001|ref|ZP_06107558.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262766114|gb|EEZ11903.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 394

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 133/379 (35%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVIG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGIQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|121707134|ref|XP_001271742.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119399890|gb|EAW10316.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 542

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/438 (18%), Positives = 150/438 (34%), Gaps = 35/438 (7%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  +S  S      + + +  H  L       +    +          P +  +  
Sbjct: 116 PYGELIPFSDPSWYQGYHSPYFNQTHATLREEVRQWVETEIE----------PYVTEWDE 165

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             +  DK+     +  +  R    GL    +  +  P   +          + M   +  
Sbjct: 166 AKQVPDKI-----YKQMGERGYLAGLLGVKYPVNHTPHRVQSVAAENWDLFHEMLLTDEL 220

Query: 150 HLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +++       P + K     +  R         +      I L +TE   
Sbjct: 221 SRAGSGGLVWNLIGGYGIGCPPLVKFGKKPLVDR-----ILPGILAGDKRICLAITEPDA 275

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A +T + +  +DG  Y ++G K ++++ +   +   A   G  G   +  LL + S
Sbjct: 276 GSDVANLTCEAKLSADGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMNGISVLLIERS 335

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  +R+ +  G  S+ T  + F +       L+G  N     +        +   I 
Sbjct: 336 AGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGIVIQ 394

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   RV   E++ YA +R   G  LID PV++  +A +A  I A       L N   + 
Sbjct: 395 CVRFARVCYEESVKYAHKRRTFGKKLIDHPVIRMKLAHMARQIEATYNW---LENIIYQC 451

Query: 384 KSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
           +S  E  A  ++   I   K            EA +  GG  Y        + R YR+  
Sbjct: 452 QSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYSRGGQGGKVERLYRDVR 511

Query: 439 ANSILLGSGNAMVLDVLN 456
           A +I  GS   M+   + 
Sbjct: 512 AYAIPGGSEEIMLDLSMR 529


>gi|307329464|ref|ZP_07608625.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306884873|gb|EFN15898.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 608

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 88/517 (17%), Positives = 191/517 (36%), Gaps = 69/517 (13%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              V  E+  L E+       E    ++ N P    + P            ++    R  
Sbjct: 38  AKSVLAEISRLSEH----ELAESYTDSDRNPPV---FDPKTH---TAPLPESFKKSYRAY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++    +A   L +        S    +  +    T  ++
Sbjct: 88  MEAEWWRLGVPEELGGTACPRSLLWGSAETILGSNTPIWMYASGPAFAGVLHDEGTEEQL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
               A  +  R++  T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 148 K--IAQLMVDRQWGST-------------MVLTEPDAGSDVGAGRTKAAQQEDGSWHIEG 192

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  F+VP+   D      G  NG+   
Sbjct: 193 VKRFITSGEHDLSDNIIHFVLARPEGAGPGTKGLSLFVVPKYDFDWDSGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G R++ T EL F       G+LLGD +     +  +     +     +++ +  
Sbjct: 253 NVEHKMGLRASNTCELTFGADHPAKGWLLGDKHDGIRQMFKIIEFARMMVGTKAMATLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLAAFTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRALVLYTAS 372

Query: 379 SFDE---AKSRSEEAAYARIMA----PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE    ++  E+A+    +     PI K +  + A   +A++++ IGGSGY++E  + 
Sbjct: 373 VQDEILVKEAAGEDASAVSRLNDLLLPIVKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILR 488
           ++ R++  +++  G+      D     ++         +   +++ L  ++G + +   R
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDYFFRKIVRDQGQALTVVSEEIKKFLAEAAGGEELEAAR 492

Query: 489 DSISLCK-EDKGLARFLTEKIALASS-AAALYRAGMN 523
           D ++    + + +   +   +A      +++Y+ G+N
Sbjct: 493 DQLAQAAVDLEAIVGAMLTDLAATEQDVSSIYKVGLN 529


>gi|328880386|emb|CCA53625.1| Glutaryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712]
          Length = 398

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 117/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     G+     +          A+ +    L  +       +      +   + 
Sbjct: 60  RELARTLGRVGVLGMHLEGYGCAGTNAVAYGLACLELEAVDSGLRSLVSVQGSLAMYAIW 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W PK+ + EY                 GLTE   G+D  A+ +  ++   
Sbjct: 120 KYGSEEQKQRWLPKMAAGEY-------------IGCFGLTEPDAGSDPGAMRTNAKRDGS 166

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ E  V  FLVP         G     +K K+  R+
Sbjct: 167 DWILNGTKMWITNGSVADVAVVWARTEDGVRGFLVPA-----GTPGFSAPEIKMKLSLRA 221

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL   +        L  + G    +  L          ++   R  L  A+ YAR 
Sbjct: 222 SVTSELVLEDVRLPADAMLPEARGLSGPLGCLNEARFGIVFGALGAARDCLETAVSYARD 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + ++ +AD+A+++     L+  L    D     +E+         + K
Sbjct: 282 RTVFARSLASYQLTQQKLADMAVELGKGMLLALHLGRLKDAGALTAEQ-------ISVGK 334

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 335 LNNVREAIAIARECRTILGANGITLEYPVLRHANNLESVLTYEGTSEVHSLVIGKAL 391


>gi|299533488|ref|ZP_07046868.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718545|gb|EFI59522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 392

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 139/384 (36%), Gaps = 29/384 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W++ E  PA H + +     GL       ++       ++ +      +MA
Sbjct: 20  EKINPHVDEWEREEIFPA-HQVFKGLGDLGLLGLTKPEAYGGSGLDYSYSL------MMA 72

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +  +   M TP + +  +  +          AP     +   +G++E
Sbjct: 73  ETLGHIRCGGVPMAIGVQTDMCTPALARFGSDAL-----RDQFLAPAIAGDMVGCIGVSE 127

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D++ I S  +K  D         W  +S  +D   ML              ++  
Sbjct: 128 PGAGSDVSGIKSHARKDGDDYVISGQKMWITNSIQADWMCMLVNTGDGPVHKNKSLIMVP 187

Query: 265 -------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL- 315
                      G+   +   KIG  S+ T  L F          +     G +  M+   
Sbjct: 188 LREGPRGKLTRGVEVAQKLRKIGMNSSDTGLLFFDEVRVPQRYLVGQEGQGFIYQMQQFQ 247

Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L ++   +  M   + + I +A++R + G  LIDQ  ++  +A++  ++ A  AL++
Sbjct: 248 EERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAELQTEVEALRALTY 307

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A  +   +        A  +A + K    ++   V    ++  GG G+  +  ++R Y
Sbjct: 308 RAAQIYMAGQD-------ALQLASMAKLKSGRLTREVADTCLQFWGGMGFTWDNRVSRLY 360

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+    SI  G+   M+  +   +
Sbjct: 361 RDGRLGSIGGGADEVMLGIIGKTM 384


>gi|116669948|ref|YP_830881.1| butyryl-CoA dehydrogenase [Arthrobacter sp. FB24]
 gi|116610057|gb|ABK02781.1| butyryl-CoA dehydrogenase [Arthrobacter sp. FB24]
          Length = 387

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 147/412 (35%), Gaps = 41/412 (9%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           + ++ LS   Q+L+        ++ A  P   + D+    P  + ++++    GL    +
Sbjct: 1   MADFELSEEYQDLSNTVREFADEVVA--PVSAKHDEEHSFP--YEIVKQMADMGLFGLPF 56

Query: 121 DRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
              F  +         A   L  + Q  A  L +     A  V    T    ++W P + 
Sbjct: 57  PEEFGGMGGDYFALALALEQLGRVDQSVAITLEAGVSLGAMPVYRFGTDAQKEEWLPSLA 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S                  G GLTE   G+D     +  +    G + ++G+K F+++  
Sbjct: 117 SG-------------QALAGFGLTEPEAGSDAGGTKTTARLEG-GEWIINGNKEFITNSG 162

Query: 240 SDA---FIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +D      + A               +  +L   +  G   ++  NK+G  ++ T  L  
Sbjct: 163 TDITRLVTVTAVTAKHERQDGTVKKEISTILVPTNTPGFKAEKAYNKVGWNASDTHPLTL 222

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSG 346
            +        L        +   L  LD   ++++ +     +  +  ++ YA+ R   G
Sbjct: 223 KDVHVPEANLLGEQGRGYANF--LSILDEGRIAIAALATGAAQGCVDLSVKYAKERSAFG 280

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   IA +      A    +  A      K    +AA A+++A        +
Sbjct: 281 QNIGKYQAIAFKIARMEARAHTARLAYYDAAARMLAGKPFKTQAAIAKMVAG-------E 333

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A     +A +  GG G+I E ++ARHYR+S    +  G+    ++ +   L
Sbjct: 334 AAMDNARDATQVFGGYGFINEFTVARHYRDSKILEVGEGTTEVQLMLIAREL 385


>gi|284028393|ref|YP_003378324.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283807686|gb|ADB29525.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 390

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 102/285 (35%), Gaps = 17/285 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E       P           +TE   G+D  AI +  ++  D  + + G K F++    +
Sbjct: 109 EQRKEYLLPTISGERRSCFAITEPGAGSDTRAIRTTARRDGDD-WIIRGEKTFITGGNEA 167

Query: 241 DAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           D  I++A  +   G        L D    G    R+   +G    AT  L F +      
Sbjct: 168 DFAIVIAVTDPEKGSKGGFTAFLVDRER-GWTSDRI-VTMGQAVPAT--LNFDDVRVPGD 223

Query: 300 GDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L  +  G    M+ ++          +      L  AI +A  R   G  + D   ++
Sbjct: 224 HVLGEIGQGYELAMRWIMKGRFIIPARGIGACERLLELAIEHATSRETFGRPIADNQAIQ 283

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IAD  +++ AA  L    A + D+ +    ++A       I K +       +    +
Sbjct: 284 WMIADSEVEMEAARWLVLYAAWAVDQGRHPQHDSA-------IAKLYGTNTVNRIADRVL 336

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           +  GG GY +E  I R +RE     I  G+     L +   L +G
Sbjct: 337 QIHGGMGYTKELPIERWFREVRLWRIFEGTDEMQRLIISRGLLRG 381


>gi|329849515|ref|ZP_08264361.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
 gi|328841426|gb|EGF90996.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19]
          Length = 395

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 128/363 (35%), Gaps = 38/363 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL  +     +        A+ + A  +  +       +   S      +    T   
Sbjct: 61  ELGLLGATLPEQYGGAGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGTQEQ 120

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+   E+                 GLTE   G+D  A+ S+ +KI  G      
Sbjct: 121 RMKYLPKLARGEW-------------VGCFGLTEPDAGSDPGAMRSKAEKIDGGYRLTGT 167

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +SP++D F++ A+ +   G   +   + +    GL   ++  K+  R++ T E+ 
Sbjct: 168 KMWISNSPIADVFVVWAKSDAHNGE--IKGFVLEKGMKGLTAPKIHGKLSLRASITGEIV 225

Query: 291 FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----R 342
                     LL +++   GP         L+ A   ++   +  AE   +  R     R
Sbjct: 226 MDGVEVSEDALLPNVSGLKGP------FGCLNRARYGIAWGVMGAAEDCWHRARQYGLDR 279

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    + ++ +AD+  +I      + R+   FD  K        A  M  + K 
Sbjct: 280 KQFGKPLAQMQLFQKKLADMQTEITLGLQAALRVGQLFDAGKV-------APEMISLIKR 332

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             C  A  +   A +  GG+G  EE  + RH +     +   G+ +   L +L   + G 
Sbjct: 333 NNCGKALDIARVARDMHGGNGIHEEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTGL 391

Query: 463 NLF 465
             F
Sbjct: 392 QAF 394


>gi|23501963|ref|NP_698090.1| glutaryl-CoA dehydrogenase [Brucella suis 1330]
 gi|163843352|ref|YP_001627756.1| glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|225627560|ref|ZP_03785597.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|254704378|ref|ZP_05166206.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|254706728|ref|ZP_05168556.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10]
 gi|254710165|ref|ZP_05171976.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|254714164|ref|ZP_05175975.1| glutaryl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|254717599|ref|ZP_05179410.1| glutaryl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|256031660|ref|ZP_05445274.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|256061171|ref|ZP_05451324.1| glutaryl-CoA dehydrogenase [Brucella neotomae 5K33]
 gi|256369513|ref|YP_003107023.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260168793|ref|ZP_05755604.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261219432|ref|ZP_05933713.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261314191|ref|ZP_05953388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261317720|ref|ZP_05956917.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261321928|ref|ZP_05961125.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261325175|ref|ZP_05964372.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261755051|ref|ZP_05998760.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|261758275|ref|ZP_06001984.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|265988751|ref|ZP_06101308.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294852332|ref|ZP_06793005.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|23347910|gb|AAN30005.1| glutaryl-CoA dehydrogenase [Brucella suis 1330]
 gi|163674075|gb|ABY38186.1| Glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445]
 gi|225617565|gb|EEH14610.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo]
 gi|255999675|gb|ACU48074.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915]
 gi|260924521|gb|EEX91089.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M13/05/1]
 gi|261294618|gb|EEX98114.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M644/93/1]
 gi|261296943|gb|EEY00440.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|261301155|gb|EEY04652.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae
           5K33]
 gi|261303217|gb|EEY06714.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261738259|gb|EEY26255.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261744804|gb|EEY32730.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|264660948|gb|EEZ31209.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|294820921|gb|EFG37920.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026]
          Length = 394

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 133/379 (35%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|307296301|ref|ZP_07576128.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
 gi|306878103|gb|EFN09326.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1]
          Length = 403

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 133/369 (36%), Gaps = 37/369 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+ +    G    +       +       + A    L+A+  A   MS S   A   A
Sbjct: 48  RELIEQMGDLGFFGIVIPEELGGLG------LGAFEFCLVAEELARGWMSASSIIARGNA 101

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     +     S E        M +        L+E   G+D++ IT Q ++  D
Sbjct: 102 ---------GYLTVPGSGEARKEKIRLMAQGRYLGASALSEPGTGSDLSGITCQARRDGD 152

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGS-PNGLCYQRLK 276
                    W   +  ++   +L ++EG           ++P     G  P G+      
Sbjct: 153 HWVITGNKYWCTYADGANFIRVLCRLEGEDEPSGKAKTAIIPVEKPAGQLPEGVT-GNPI 211

Query: 277 NKIGNRSNATVELEFSNTFGFL----LGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMR 329
            KIG     T EL F +    +       L    G V        L    +A  S+   R
Sbjct: 212 PKIGYYGWKTWELRFEDVRVPIQSTDEAPLGYGGGGVNAAAQSLSLARAHTAARSIGLAR 271

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L +AI YA+ R   G  + D   ++  IA +A ++ AA  L   +    D  ++    
Sbjct: 272 GALEDAIAYAKDRVQFGQPISDFQAIRFKIATMATEVEAARQLLHYVCAEIDAGRAE--- 328

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R+   + KY+  +MA  V +EA++  GGSGY    ++ RH+R++    I  G+   
Sbjct: 329 ----RVHTSMVKYFAAEMAERVTSEALQIHGGSGYTTLHAVERHWRDARLTKIFEGTSEI 384

Query: 450 MVLDVLNLL 458
               + + L
Sbjct: 385 QQRIIADSL 393


>gi|62290000|ref|YP_221793.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82699928|ref|YP_414502.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189024241|ref|YP_001935009.1| glutaryl-CoA dehydrogenase [Brucella abortus S19]
 gi|237815509|ref|ZP_04594506.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|254689313|ref|ZP_05152567.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|254693798|ref|ZP_05155626.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|254697447|ref|ZP_05159275.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730344|ref|ZP_05188922.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|256257560|ref|ZP_05463096.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260546555|ref|ZP_05822294.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260754828|ref|ZP_05867176.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260758045|ref|ZP_05870393.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260761871|ref|ZP_05874214.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883840|ref|ZP_05895454.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261214078|ref|ZP_05928359.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297248402|ref|ZP_06932120.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62196132|gb|AAX74432.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941]
 gi|82616029|emb|CAJ11065.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189019813|gb|ACD72535.1| glutaryl-CoA dehydrogenase [Brucella abortus S19]
 gi|237788807|gb|EEP63018.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260095605|gb|EEW79482.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|260668363|gb|EEX55303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 4 str. 292]
 gi|260672303|gb|EEX59124.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674936|gb|EEX61757.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 6 str. 870]
 gi|260873368|gb|EEX80437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260915685|gb|EEX82546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|297175571|gb|EFH34918.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 394

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 133/379 (35%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGIQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|55378695|ref|YP_136545.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55231420|gb|AAV46839.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 387

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 131/360 (36%), Gaps = 31/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G +    D    P + + A+ +    L                     +  
Sbjct: 46  DLITEMGELGFYAPNLDGYGLPGLSETAYGLLLQELEAGDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W P + S E                  GLTE   G++ +A+ +  ++ +DG
Sbjct: 106 YGSDAQKEEWLPALGSGE-------------RVGCFGLTEPEHGSNPSAMETTAERDADG 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  ++P+SD  ++ A+V    G   V   L +   +G+   ++  K+  R++
Sbjct: 153 YVLNGSKTWITNAPISDLAVVWAKVTSADGDP-VRGFLVETDRDGVTTNKIDEKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHY 338
            T E+   N       + NV  G VE MK  L  L  A   ++   V  A      A  Y
Sbjct: 212 ITGEISLQNAHVP---EENVLPG-VEGMKGPLSCLTQARYGIAWGTVGAAMDCFETAHEY 267

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +    + +  +A++A  I+    L+ RLA+  +    R E+ + A+    
Sbjct: 268 ATDREQFGKPIAGYQLQQEKLAEMATQISLGQLLAHRLADLKERGDLRPEQVSMAKR--- 324

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  +MA      A E +GG+G   + S  RH           G+ +   L + + L
Sbjct: 325 ----NNARMAREQSRVAREMLGGNGITADYSPMRHLTNLETVYTYEGTHDIHSLIIGHDL 380


>gi|145596835|ref|YP_001161132.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145306172|gb|ABP56754.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 388

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 136/388 (35%), Gaps = 24/388 (6%)

Query: 68  CTAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
              +EL R  MA    P L  +   GE             L   +   GL    +     
Sbjct: 10  RQLRELTRTFMAKEVLPHLDDWERAGE---------VPRELHATAATVGLLGIGFPEEVG 60

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                    +      + +   +G + +      ++  L+      +   P         
Sbjct: 61  GSGGDLLDSVVVTEEIIRSGGSSGLVAALFTHGIALPHLVAASAGTQT--PSTAGSNLVE 118

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P    ++   L +TE  GG+D+A + +  ++  D  Y ++G K +++S     F+ 
Sbjct: 119 RYVRPTLAGTMIGALAVTEPGGGSDVAGLRTTARRDGDH-YLVNGAKAYITSGHRADFVT 177

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDL 302
            A   G      +  L+ +    G    R   K+G   + T EL F++    +   +G  
Sbjct: 178 TAVRTGGSDAGGISLLVIEKGTPGFTVGRRMEKLGWHCSDTAELSFADVRVPVANRVGAE 237

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           N     +        +  A  + +  +  +  A+ + R R   G  L+ + V++  +A++
Sbjct: 238 NTGFLSIMQNFAAERISLATQAYATAQRCVELALSWCRDRETFGRPLVGRQVVRHRLAEL 297

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
                +A +    +A      ++   E A A+  A             V+  A++  GG 
Sbjct: 298 HTRAESARSYVLDVATRVAAGEAEMTEVAMAKNAAVAAC-------AEVVDGALQLHGGF 350

Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450
           GY+ +  + RHYR+     I  G+   M
Sbjct: 351 GYLRDAEVERHYRDQRILGIGGGTTEIM 378


>gi|254436739|ref|ZP_05050233.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252185|gb|EDY76499.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 406

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 127/365 (34%), Gaps = 34/365 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R+    GL        +  +      + + A  +  +       +   S      +    
Sbjct: 68  RQMGDAGLLGLTIPEEYGGLGAGYVTYGLVAREIERVDSGYRSMMSVQSSLVMYPIHAYG 127

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K + P + S E             +    GLTE   G+D A + +   K + G  
Sbjct: 128 SEEQRKKFLPGLASGE-------------LIGCFGLTEPDAGSDPAGMKTSAVKTATGYK 174

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++ A+ +   G   +   + +    GL   ++  K+  R++ T
Sbjct: 175 ISGAKMWISNAPIADVFVVWAKSDDHSGN--IRGFILEKGMMGLSAPKIGGKLSLRASVT 232

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRH-- 343
            E+             +     V+ +K     L+ A   ++   +  AE   +A RR+  
Sbjct: 233 GEIVMDGVEV----GEDALLPNVQGLKGPFGCLNRARYGIAWGVMGAAEFCWHAARRYGL 288

Query: 344 ---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
                G  L    + ++ +AD+  +I      + +L    D  K+       A  M  + 
Sbjct: 289 DRKQFGKPLAQTQLFQKKLADMQTEITLGLQSALQLGRLMDAGKA-------APAMISMM 341

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   + +  GG+G  +E  I RH       +   G+ +   L +L   + 
Sbjct: 342 KRNNCGKALDIARASRDMHGGNGISDEFHIMRHMVNLETVNTYEGTHDVHAL-ILGRAQT 400

Query: 461 GTNLF 465
           G   F
Sbjct: 401 GLQAF 405


>gi|300778441|ref|ZP_07088299.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300503951|gb|EFK35091.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 392

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 32/296 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    K + PK+ + E                  GLTE   G+D  ++ +  + +
Sbjct: 112 INEFGSEEQKKKYLPKLAAGEM-------------IGSFGLTEPNHGSDPGSMETNFKDM 158

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  +SP+ D  ++ A+ E       V  L+ +    G       NK   
Sbjct: 159 GDHYLLNGAKMWITNSPLCDIAVVWAKNEEGK----VQGLIVERGMEGFTTPETHNKWSL 214

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
           R++ T EL F+N         N+  G       L  L+SA   +S   +  A      A+
Sbjct: 215 RASKTGELVFNNVKVP---KENLLPGVTGLKGPLSCLNSARYGISWGVIGAAIDCYCTAV 271

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y++ R   G  +    + ++ +A+   +I  A  L  +L N  ++ K+   + + A+  
Sbjct: 272 QYSKERKQFGKPIGSYQLQQKKLAEFLTEITKAQLLCLQLGNLKNDHKATPAQISMAKR- 330

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                    KMA  +  E+ + +GG G + E  + RH     +     G+ +  +L
Sbjct: 331 ------NNVKMAIDIARESRQILGGMGIMGEFPMMRHAANLESVITYEGTHDVHLL 380


>gi|224007423|ref|XP_002292671.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana
           CCMP1335]
 gi|220971533|gb|EED89867.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana
           CCMP1335]
          Length = 447

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/370 (20%), Positives = 141/370 (38%), Gaps = 30/370 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL--MSPSVTS 158
           P +      +   G+        +       A  +      L     A  L  ++ SV  
Sbjct: 91  PLFRKFGSNNGGLGILGLTVPEDYGGTGFIDASAVAIVHEELSYSDPAFCLSYLAHSVLL 150

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+ +A+  +      +   +                S+  G+ ++E   GTD+  + S  
Sbjct: 151 ANNLAVNGSQEQLSRFMQGVCDG-------------SMIGGMCMSEPNAGTDVLGMRSNA 197

Query: 219 QKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ-RL 275
              +  DG        W  +    D F++ A+         + + + +G   G     ++
Sbjct: 198 VYDAKRDGFVLNGTKMWITNEETGDLFLVYARTGTEKRTD-ITQFIVEGGMEGFSVGQKI 256

Query: 276 KNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            +K+G R++ T EL F N F      ++GD+N +T  +     +  +  A M++   R S
Sbjct: 257 NDKLGMRASPTAELVFENVFLPSKTHVVGDVNGATLCMMRNLEIERVALAAMAIGLARRS 316

Query: 332 LAEAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           L E I YA  R   G   L     +++ IA+   +  A     +  ANS D +       
Sbjct: 317 LDEMIAYAGNRPAFGKPNLYGFGQIQKHIAESYAEYMAGKCYLYGFANSLDLSTYGH--- 373

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               + A   K +C +M+  V   A++ +GG GY+ E ++ R +R+S    I  G+  + 
Sbjct: 374 ---GLDADGVKLYCAQMSKNVADRAIQVLGGYGYVGEYTVERLWRDSKLLQIGGGTSESH 430

Query: 451 VLDVLNLLEK 460
             ++   L +
Sbjct: 431 HKNMSRDLHR 440


>gi|254524492|ref|ZP_05136547.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219722083|gb|EED40608.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 387

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 127/371 (34%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +D+  F      L+      GL  +     +        ++ +    L         
Sbjct: 39  GDAFDQARFPA---ELVPEIAALGLLGATLPAEYGGGDLGAVSYGLICQELERGDSGLRS 95

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P              M +  +    GLTE  GG+
Sbjct: 96  FVSVQSSLCMYPIYAYGSEEQRQQWLP-------------AMARGELIGCFGLTEAHGGS 142

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ ++  +            W  S P++D  I+ AQ E  +  F++     +    G
Sbjct: 143 DPGSMKTRAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGFVL-----EKGMAG 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              Q +K+K+  R++ T  L F +        L    G    +  L       +   +  
Sbjct: 198 FTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLTQARFGISWGPIGA 257

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA+ R + G  L      +  +A++A  I  A  L+ +L    +  + + 
Sbjct: 258 AIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTAQLLALQLGRLKEAGQLQP 317

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ + A+          C+MA  +  E  + +GG+G   E    RH     +     G+ 
Sbjct: 318 QQVSLAKW-------NNCRMAIDIARECRDLLGGAGITTEHVAIRHALNLESVITYEGTE 370

Query: 448 NAMVLDVLNLL 458
               L +   L
Sbjct: 371 TVHQLVIGREL 381


>gi|161619036|ref|YP_001592923.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260566377|ref|ZP_05836847.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|161335847|gb|ABX62152.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260155895|gb|EEW90975.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
          Length = 394

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 134/379 (35%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL      + +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPKDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|158314832|ref|YP_001507340.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158110237|gb|ABW12434.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 619

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 93/516 (18%), Positives = 187/516 (36%), Gaps = 66/516 (12%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              H+ L  L E V      E    A+ + P L      G         P        + 
Sbjct: 46  DTAHEVLAEL-ERVAVGPIAESFEDADRHPPTLDP--ATG-----TVTLPESFRKSFAAA 97

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +G    ++       +        AA   L+    A  +     T A+++  + TP   
Sbjct: 98  QEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTP--- 154

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
                      +         +      + LTE   G+D+ A  ++  +  DG + + G 
Sbjct: 155 -----------WQKKIANWAIERHWGATMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGV 203

Query: 232 KWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQR 274
           K F++S   D       ++LA+ EG       +  F+VP+ L D      G+ NG     
Sbjct: 204 KRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPETGAPGARNGAYVTN 263

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L+ K+G + + T EL F       G+L+GD++     +  +     +     +++ +   
Sbjct: 264 LEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLSTG 323

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ +AR R                  +I+ P ++R +           AL    A  
Sbjct: 324 YLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATF 383

Query: 380 FD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            D         +          ++ PI K    + +  ++A +++ +GGSGY+++  I +
Sbjct: 384 QDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSYELLASSLQVLGGSGYLQDYPIEQ 443

Query: 433 HYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + R++  +++  G+ +    D+     + +KG  L        E   G +G   +   R+
Sbjct: 444 YIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVKGEAGNGALRAERE 503

Query: 490 SI-SLCKEDKGLARFLTEKIALASSA-AALYRAGMN 523
           S+ +   E + +   +   +   +   + +YR G+N
Sbjct: 504 SLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLN 539


>gi|17534353|ref|NP_496469.1| hypothetical protein F54D5.7 [Caenorhabditis elegans]
 gi|2492633|sp|Q20772|GCDH_CAEEL RecName: Full=Probable glutaryl-CoA dehydrogenase, mitochondrial;
           Short=GCD; Flags: Precursor
 gi|3877512|emb|CAA91333.1| C. elegans protein F54D5.7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 409

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 145/420 (34%), Gaps = 37/420 (8%)

Query: 46  LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
                 S  +++   L + +       +     Y   +L        R +K  F P+   
Sbjct: 13  ASRGLSSTFYQDAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEK--FDPS--- 67

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L+      GL  + +            + + A  +  +       +   +      +   
Sbjct: 68  LIPEMGSMGLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNY 127

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-G 224
            +    + + P + S                    GLTE   G++   + ++        
Sbjct: 128 GSEDQKQKYIPDLASG-------------KKIGCFGLTEPNHGSNPGGMETKATWDETTK 174

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y L+G K ++S+ P+SD  ++ A+         +   + +    GL   +++ K+  R+
Sbjct: 175 TYKLNGSKTWISNSPVSDVMVVWARS--ARHNNKIKGFILERGMKGLTTPKIEGKLSLRA 232

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T ++   +        L  + G          L++A + ++   +  AE     A  Y
Sbjct: 233 SITGQIAMDDVPVPEENLLPNAEGLQGPFG---CLNNARLGIAWGALGAAEECFHLARQY 289

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    +M+  +AD+  +I+       R++   DE K +SE+         
Sbjct: 290 TLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQGCLRVSRLKDEGKVQSEQ-------IS 342

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K   C  A  V  +A + +GG+G ++E  I RH       +   G+ +   L +   +
Sbjct: 343 IIKRNSCGKALEVARKARDMLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALILGRAI 402


>gi|183980486|ref|YP_001848777.1| acyl-CoA dehydrogenase FadE3_2 [Mycobacterium marinum M]
 gi|183173812|gb|ACC38922.1| acyl-CoA dehydrogenase FadE3_2 [Mycobacterium marinum M]
          Length = 390

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 133/367 (36%), Gaps = 31/367 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++R    G++      ++          ++  +      +     M      
Sbjct: 42  YPQAWIEQMKR---IGIYGLAIGEAYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 98

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T      + P + + E   T             + LTE  GG+D+  +++  
Sbjct: 99  AKLLMLFGTDEQKSTYLPAMATGELRAT-------------MALTEPGGGSDLQNMSTTA 145

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRL 275
                    ++G K ++S+      I +L + +         +  +L +  P GL     
Sbjct: 146 MADGPDQLLITGAKTWISNARRSGLIALLCKTDPHATPRHHGISIVLVEPGP-GLNISAD 204

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVS 331
             K+G +     EL F N        L      G  + MK L    +  A  ++     +
Sbjct: 205 LPKLGYKGVEACELSFDNYRAPTSAILGGQPGQGFSQMMKGLETGRIQVAARALGVASAA 264

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ YA++RH  G  +     +   +AD+A  + AA  L+   A  +D  +    EA 
Sbjct: 265 LDDALAYAQQRHSFGQPIWKHQAIGNYLADMATKLTAARQLTHYAAQRYDSGQRCDMEAG 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K +  + A  +   A+   GG GY  E  + R++R++P   +  G+     
Sbjct: 325 MA-------KLFASETAMEIALNAVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQR 377

Query: 452 LDVLNLL 458
             +   L
Sbjct: 378 NVIARQL 384


>gi|116694920|ref|YP_729131.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529419|emb|CAJ95766.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 379

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 26/352 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        +          I +      A      ++     +   + +     +
Sbjct: 48  AELGLMGMNLPERWGGTETSPVALILSLAEVAKACASTSSMIGAHYLATDSILIGGDDSL 107

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +   P                         LTE R G++ A + ++     DG Y L G
Sbjct: 108 RERHLPD-------------AAAGGKLGAFALTEPRAGSNPADMATRATPEGDG-YRLRG 153

Query: 231 HKWFLSSPMSDAFIML-AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
            K F+S+  +  FI++ A+ +   G   +   + D    G+     +  +G R     E+
Sbjct: 154 VKHFISNADAADFIVVYAKTDPAAGTRGISAFVVDRHSEGVQIAPAEKLMGIRGAPAHEV 213

Query: 290 EFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
              + F      L    TG    MK+L    LD A  S+     +LA A  +AR+R V G
Sbjct: 214 AL-DCFVPAANRLGPEGTGFRTAMKVLDNSRLDVAATSLGIAEAALACAADWARQRQVGG 272

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L  +  ++   AD+   + AA  L+ + A    + +  +E+A+ A       K +  +
Sbjct: 273 EPLARKQGLQWMFADMRTRLEAAWLLTLQAAVRRRDGEPFTEQASMA-------KLYASE 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           M   V   A++  GG G+  E  + R  R++    I  GS       +   +
Sbjct: 326 MVGFVTDAALQIHGGYGFTREMPLERLVRDARILRIYEGSSEIQRTVIARAV 377


>gi|190572278|ref|YP_001970123.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
 gi|190010200|emb|CAQ43808.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia
           K279a]
          Length = 390

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 130/378 (34%), Gaps = 32/378 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +D+  F      L+      GL  +     +        ++ +    L         
Sbjct: 42  GDAFDQARFPD---ELVPEIASLGLLGATLPTEYGGGGLGAVSYGLICQELERGDSGLRS 98

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P              M +  +    GLTE  GG+
Sbjct: 99  FVSVQSSLCMYPIYAYGSEEQRQQWLP-------------AMARGELIGCFGLTEAHGGS 145

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D A++ ++  +            W  S P++D  I+ AQ E  +  F++          G
Sbjct: 146 DPASMKTRAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGFVL-----QKGMAG 200

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              Q +K+K+  R++ T  L F +        L    G    +  L       +   +  
Sbjct: 201 FTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLTQARYGISWGPIGA 260

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA+ R + G  L      +  +A++A  I  A  L+ +L    +  + + 
Sbjct: 261 AIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTAQLLALQLGRLKEAGQLQP 320

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ + A+          C+MA  +  E  + +GG+G   E    RH     +     G+ 
Sbjct: 321 QQVSLAKW-------NNCRMAIDIARECRDLLGGAGITTEHVAIRHALNLESVITYEGTE 373

Query: 448 NAMVLDVLNLLEKGTNLF 465
               L +   L  G N F
Sbjct: 374 TVHQLVIGRELT-GINAF 390


>gi|332531250|ref|ZP_08407163.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
 gi|332039357|gb|EGI75770.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella
           gracilis ATCC 19624]
          Length = 398

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 30/358 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL       ++        A+ + A  +  +       +   S      +    
Sbjct: 57  REMGELGLLGPSIPETYGGPGLNYVAYGLIAREVERVDSGYRSMMSVQSSLVMLPIFEFG 116

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+   E+                 GLTE   G+D  ++ ++  K + G  
Sbjct: 117 TEAQKQKYLPKLARGEW-------------IGCFGLTEPDHGSDPDSMATRAHKTAGGYR 163

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+     G    +   + D    GL    +  K+G +++ 
Sbjct: 164 LKGNKMWISNSPIADVFVVWAREVSEGGQLGPIRGFVLDKGMKGLSAPAVHGKVGLKASI 223

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
           T E+   + F           G          L+SA   ++   +  AE     A  Y  
Sbjct: 224 TGEIVMDDVFVPEDNAFPEVRGLK---GPFTCLNSARYGIAWGALGAAEDCWFRARQYVL 280

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+  +I+       RL    DE  +       A  +  I 
Sbjct: 281 DRKQFGRPLAANQLIQKKLADMQTEISLGLLGCLRLGRMKDEGTA-------AVEITSIL 333

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A  V   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 334 KRNSCGKALDVARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAM 391


>gi|326328574|ref|ZP_08194914.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953535|gb|EGD45535.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 617

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 92/525 (17%), Positives = 184/525 (35%), Gaps = 84/525 (16%)

Query: 32  IGMNAYS---SDSLL-----VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83
           I  N +    +D +L       L  +    +  E+E L    L+ +  E    A+ N P 
Sbjct: 11  IEFNLFEVFGTDKVLGTGPFADLDVDTAKEILAEVERLSREDLAESFVE----ADRNPPV 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              + P   + +      A+       +  G             V   +     A + L 
Sbjct: 67  ---FDP---KTNTAPVPAAFKKSYDAWMESGFWSLQTPEEIGGQVAPNSLIWATAEMLLG 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A        +    S  +                    + D      M +      + LT
Sbjct: 121 ANPAIWMYGAGPFFSKVVYEN---------------GNDRDKRIAEIMVERLWGSTMVLT 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------- 251
           E   G+D+ A  +      DG + ++G K F++S  SD       ++LA+ +G       
Sbjct: 166 EPDAGSDVGAGKTFATPNEDGSWNITGVKRFITSAESDLQENIMHLVLARPKGVEGVGGP 225

Query: 252 ---RVGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN-------- 293
               +  FLVP+   D       G  NG     +++K+G + + T EL F +        
Sbjct: 226 GTKGLSLFLVPKYHFDHETGELTGERNGAYVTNVEHKMGIKVSNTCELTFGDPQVGGGEP 285

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------ 347
             G+LLG+++     + D+     +     +++ +      A+ YA+ R           
Sbjct: 286 AKGWLLGEVHDGIRQMFDVIENARMMVGTKAIATLSTGYLNALEYAKTRVQGADLTKAAK 345

Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFR-------LANSFDEAKSRSEEAAYARI 395
                 +   P ++R++           AL +        +  + D +      AA   +
Sbjct: 346 TDPRVTITHHPDVRRSLLVQKSFAEGMRALVYYTTSWQEKVVLTEDGSDENKLAAAVNDL 405

Query: 396 MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + PI K +  + A  ++  E+++  GGSG+++E  I ++ R++  +SI  G+      D 
Sbjct: 406 LLPIVKGYGSERAWTLLGTESLQTFGGSGFLQEYPIEQYVRDAKIDSIYEGTTAIQGQDF 465

Query: 455 L--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               +++       Q+   ++  L + G   +   R  ++   ED
Sbjct: 466 FFRKIVKNQGAALGQIAGEIQAFLDNEGSAELKESRALLATALED 510


>gi|302900153|ref|XP_003048205.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729137|gb|EEU42492.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 546

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 85/405 (20%), Positives = 144/405 (35%), Gaps = 32/405 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDR 122
            L    +E    A                WD+ +  P   +  + RR    GL    +  
Sbjct: 148 ALRAEVREWI-DAEIEP--------NVTEWDEAKQVPEEIYKEMGRRGYLAGLLGVKYPT 198

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
           ++ P   K     +    + M   +            +++       P V K  + K+  
Sbjct: 199 NYVPQGTKSVPPEKWDLFHEMIITDELSRTGSGGFVWNVIGGFGIGCPPVIKFGSKKLKD 258

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
           R         +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +
Sbjct: 259 RIM-----PGILNGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGI 313

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              +   A   G  G   V  LL +    G+  +R+ N  G  S+ T  + F +      
Sbjct: 314 WCDYFTTAVRTGENGMNGVSLLLIERG-EGVTTRRM-NCQGVHSSGTTYITFEDVKVPVE 371

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG  N     +        +   I S+   RV   E++ YA +R   G  LI+ PV++
Sbjct: 372 NLLGKENKGFRVIMTNFNHERMGIIIQSLRFSRVCYEESVKYANKRRTFGKKLIEHPVIR 431

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAE 414
             +A +A  I A+      L N   + +   E  A  R+  PI                E
Sbjct: 432 MKLAHMARQIEASYNW---LENLIYQCERMGETEAMLRLGGPIAGLKAQSTLTFEFCARE 488

Query: 415 AMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A +  GG  Y        + R YR+  A +I  GS   M+   + 
Sbjct: 489 ASQIFGGLSYSRGGQGAKVERLYRDVRAYAIPGGSEEIMLDLSMR 533


>gi|220921271|ref|YP_002496572.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945877|gb|ACL56269.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 413

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 131/371 (35%), Gaps = 38/371 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             L       GL        +        A+ + A  +  +       +   S      +
Sbjct: 71  RNLFNAMGELGLLGVTLPEEYGCAGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPI 130

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P + S E             +    GLTE   G+D   + ++ +KI 
Sbjct: 131 YAYGDETQRKTYLPGLASGE-------------LVGCFGLTEPDAGSDPGGMKTRAKKID 177

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  ++P++D F++ A+         +   + +    GL   ++K K+  R
Sbjct: 178 GGYLLSGVKTWISNAPIADVFVVWAKS--AAHDNQIRGFILEKGMKGLSAPKIKGKLSLR 235

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
           ++ T E+           LL +++   GP         L+ A   +S   +  AE     
Sbjct: 236 ASVTGEIVMDGVEVPESALLPNVSGLKGP------FGCLNRARYGISWGAMGAAEDCWHR 289

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L    +++R +AD+  +IA     S R+   FDE +        A 
Sbjct: 290 ARQYTLDRTQFGRPLAQTQLVQRKLADMQTEIALGLQASLRVGRLFDEGRV-------AP 342

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K   C  A A+  EA +  GG+G + E  + RH +     +   G+ +   L +
Sbjct: 343 EMISIVKRNNCGKALAIAREARDMHGGNGIMGEYHVMRHAQNLETVNTYEGTHDVHAL-I 401

Query: 455 LNLLEKGTNLF 465
           L   + G   F
Sbjct: 402 LGRAQTGLQAF 412


>gi|111221036|ref|YP_711830.1| acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111148568|emb|CAJ60241.1| Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 405

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 141/391 (36%), Gaps = 42/391 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   GL+      +        +  + +  L+       
Sbjct: 30  PAAPDWDEREQTP--WPIIQEAAKIGLYDFDALATLWADPTGLSLPLVSEELFWGDAGIG 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +M  ++  A +V+   TP    +WAP+ F    DP                ++E   G
Sbjct: 88  MSIMGTTLGVAGIVS-AGTPEQIGEWAPQCFGDASDP----------KVAAFCVSEPGAG 136

Query: 209 TDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D++A+  + +    +D         W  +  ++   +++A V+  +G       +    
Sbjct: 137 SDVSALRVRARHDPATDEWILSGQKAWITNGGIAAVHVVVASVDPELGSRGQAAFVVPPG 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV------------------STGP 308
             GL   R   K+G R++ T ++   +        L                        
Sbjct: 197 TPGLTASRKIRKLGLRASHTADVFLDDVRVPGRCLLGGRERLDERLAAARAGRRASGQAA 256

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +   ++         ++   R +   A+ YAR R   G  +I    +  A+AD+ ++I A
Sbjct: 257 LATFEV-TRPIVGAQAIGIARAAYEYALDYARGREQFGRPIITNQAIAFALADMRMEIDA 315

Query: 369 ATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  L +R A      +     E + +++ A     W  + A       ++ +GG+GY  +
Sbjct: 316 ARLLIWRAAWMGHSGRPFEAGEGSMSKLKASEVAVWATEKA-------VQILGGAGYSRD 368

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + R +R+S   +I  G+     L +   +
Sbjct: 369 HPVERMFRDSKIYTIFEGTSEIQRLVIARAI 399


>gi|304310683|ref|YP_003810281.1| Putative acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796416|emb|CBL44624.1| Putative acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 423

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 132/372 (35%), Gaps = 22/372 (5%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           A     ++   +    +    S     ++ +   +AAR+   A  EA  ++         
Sbjct: 54  ATQQFQKQIAKERAQAAGTAESEPKEKKELSASEKAARIAAKADQEAMRMLPIIELCRYC 113

Query: 162 VALMTTPRVHKDWAPKIFSR----EYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
             L+T   V    A          E       P+          +TE   G+D    + S
Sbjct: 114 PGLVTAMGVSIGLAGGAIQSKGTLEQKERWALPLLTLEKIGAWAITEPNSGSDAFGGMKS 173

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLC 271
             ++ SDG Y L+G+K F+++   +D  I + +++          ++  +L D    GL 
Sbjct: 174 LARRTSDGQYVLNGNKTFITNGPYADTIIFICRLDEPDVPPPQRKVLSFIL-DKGMPGLT 232

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL-----LGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                 K+G  S+ T EL   +            +        +D         A M++ 
Sbjct: 233 QSAPFKKMGIHSSPTGELFLQDVVVGKDRLLGGSEEGSGRSGAKDTFTTERSGVAAMALG 292

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +   L  ++ YA+ R   G  + +  +++  +A + +       + FR        K  
Sbjct: 293 IIERCLELSVKYAKERVQFGRPISEFQLIQLKLAKMEVARVNLQNMVFRHIELLANDKRP 352

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R+S    I  G+
Sbjct: 353 TLAEASAMKL------YAAQAAVEVALEAVQIHGGNGYMVEYHVEQLLRDSKILQIYGGT 406

Query: 447 GNAMVLDVLNLL 458
               +  +   L
Sbjct: 407 DEIQITHIARDL 418


>gi|268531920|ref|XP_002631088.1| Hypothetical protein CBG02861 [Caenorhabditis briggsae]
          Length = 413

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 133/367 (36%), Gaps = 31/367 (8%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +EF P+   L+      GL  + +            + + A  +  +       +   + 
Sbjct: 66  IEFDPS---LIPEMGSMGLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTS 122

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    T    + + P + S                    GLTE   G++   + +
Sbjct: 123 LVIGPIYNYGTEEQKQKYIPDLASG-------------KKIGCFGLTEPNHGSNPGGMET 169

Query: 217 QGQKIS-DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           +         Y LSG K ++S+ P++D  ++ A+   R G  +   +LE G   GL   +
Sbjct: 170 KAIWDETSKTYKLSGSKTWISNSPVADVMVVWARSS-RHGNKIKGFILERG-MKGLTTPK 227

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+  R++ T ++   +       LL ++    GP   +     L  A  S+      
Sbjct: 228 IEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLQGPFGCLNN-ARLGIAWGSLGAAEEC 286

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  Y   R   G  L    +M+  +AD+  +I+       R++   DE K   E+  
Sbjct: 287 FHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQGCLRVSRLKDEGKVEPEQ-- 344

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  I K   C  +  +  +A + +GG+G ++E  I RH       +   G+ +   
Sbjct: 345 -----ISIIKRNSCGKSLEIARKARDMLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHA 399

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 400 LILGRAI 406


>gi|293603226|ref|ZP_06685658.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292818358|gb|EFF77407.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 390

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 118/325 (36%), Gaps = 24/325 (7%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             +   +  A    +     +  ++LM +  + + + P++              +     
Sbjct: 86  ETFARHEGLADFAFAMQGLGSGAISLMGSDELRQRYLPRV-------------AQGQAIA 132

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              L+E   G+D+AA+  + +   D         W  +  ++D +++ A+     G   +
Sbjct: 133 AFALSEPDAGSDVAALACEAKLDGDHYVLNGAKTWISNGGIADFYVVFARTGEAPGARGI 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL-- 315
              + D    G         I     AT  + F N    L   L     G    M  L  
Sbjct: 193 SAFVVDADTPGFEVSERIELIAPHPLAT--ITFDNCRVPLSHRLGEAGQGFKLAMMTLDI 250

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++   R +L E +  A+ R + G  L D  + + A+ D+A  I A+  L++R
Sbjct: 251 FRASVAAAALGFARRALDEGLARAKSRRMFGQTLADLQLTQAALGDMATAIDASALLTYR 310

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  K R+         A + K    + A  VI  A++  GG+G +    + + YR
Sbjct: 311 AAWMRDVQKLRT------TREAAMAKMTATESAQTVIDRALQMFGGAGVVSGMPVEKLYR 364

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           E  A  I  G+     L +   L K
Sbjct: 365 EIRALRIYEGATEVQKLIIARELLK 389


>gi|327263272|ref|XP_003216444.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 452

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 113/311 (36%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++              K  +    GLTE   G+D   +
Sbjct: 159 SSLVMHPIYAYGSEEQKQKYLPRL-------------AKGELLGCFGLTEPNHGSDPGGM 205

Query: 215 TSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +       Y L+G K W  +SPM+D  ++ A  E       V   L +    GL  
Sbjct: 206 ETRAKYNPSRKTYTLNGTKTWITNSPMADLCVVWAVCEDGK----VRGFLVERGTKGLST 261

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++ T  +   +     + + N+             L++A   ++   +  
Sbjct: 262 PKIEGKFSLRASITGMIVMEDV---EIPEENLLPNVSGLAGPFGCLNNARYGIAWGALGA 318

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R      L    ++++ +AD+  +I        +L    DE K+  
Sbjct: 319 AEFCMQTARQYTLDRMQFKVPLARNQLIQKKLADMLTEITIGLQACLQLGRLKDEDKATP 378

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 379 E-------MISMLKRNSCGKALEIARQARDMLGGNGIADEYHVIRHVMNLEAVNTYEGTH 431

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 432 DIHALILGRAI 442


>gi|160898376|ref|YP_001563958.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160363960|gb|ABX35573.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 381

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 128/367 (34%), Gaps = 30/367 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
             W+     P   AL R++   GL        +        H          A       
Sbjct: 31  NDWEAEGITP--RALWRKAGDSGLLNCDLPPPYG-QGGDFGHAAVVIEALARANCLGIGF 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S   A  +    T      W P++ + E             +   + LTE   G+D+
Sbjct: 88  SIHSDMVAPYLWNFGTQVQKDRWLPRMATGE-------------LIGAIALTEPGAGSDL 134

Query: 212 AAITSQGQKI---SDGIYCLSGHKWFLSSPMSDA-FIMLAQVEGRVGCFLVPRLLEDGSP 267
            A+ ++ ++      G Y L+G K F+++ ++    ++LA  E  +G   +   + +   
Sbjct: 135 KAVRTRARRKSESEGGGYVLNGQKTFITNGVNAGLMVVLASTEPDLGARGLSLFVVEEGM 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL       KIG  S  T EL F         LLG  N +   V        L  A+ +
Sbjct: 195 KGLGKGPALRKIGQHSQDTCELFFDELHLPADHLLGRENAAFEHVTQELAQERLAIALRA 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            +     L EA  + R R V G  ++D    +   AD                   D+  
Sbjct: 255 AASTEGMLDEAAEFVRNRKVFGRRVLDYQNTRFKFADALAKTTMLRVF-------LDDCL 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +R  E +   + A + K    ++   V+ E ++  GG GY+ E  I R + ++ A  I  
Sbjct: 308 ARHMEGSLDSVTAAMAKLNATELQGQVLDELLQLHGGYGYMAEYGIGRAWADARALRIFG 367

Query: 445 GSGNAMV 451
           GS   + 
Sbjct: 368 GSSEILR 374


>gi|313214052|emb|CBY42609.1| unnamed protein product [Oikopleura dioica]
          Length = 286

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 111/287 (38%), Gaps = 13/287 (4%)

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
            T    + K      LG++E   G+D+A I +  +   D         W  +   +D   
Sbjct: 7   KTTLWFLTKIFQVACLGVSEVHAGSDVAQIKTTAKSDGDDYIINGQKMWITNGIQADWCC 66

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
           +LA             +       G+   +   KIG  S+ T +L F +        +  
Sbjct: 67  LLANTSDGPVHKSKSLICVPMDLPGVIRAKKIEKIGMWSSDTAQLWFEDVRVPKKYIIGE 126

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             +G +  M       + +   ++SG+   + E I+Y R R   G  ++D   +   +A+
Sbjct: 127 EGSGFIYQMIQFQQERIFAMASAISGLENCINETINYTRERQAFGKSVLDNQYIHFQLAE 186

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++    AL +R+   +   +        A  +A + K    ++   V  + ++  GG
Sbjct: 187 LQTEVELLRALLYRVTAMYVNGED-------ATKLASMGKLKTGRLIREVADKCLQMWGG 239

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLF 465
            GY  E  +++ +R+    S+  G+   M+  +  L++   KGT L 
Sbjct: 240 MGYTLENPVSQQFRDGRLASVGGGADEIMLQIICKLMDILPKGTKLI 286


>gi|254230755|ref|ZP_04924082.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
 gi|124599814|gb|EAY58824.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis C]
          Length = 396

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 139/427 (32%), Gaps = 44/427 (10%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P  +   L    E  +  T +     A + TP + A+   G+        P   
Sbjct: 9   ALDRDDPLGLDASLSSD-EIAVRDTVRRF--CAEHVTPHVAAWFEDGDL-------PVAR 58

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    GL                 + +    L          +      +   +A 
Sbjct: 59  DLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIAS 118

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + +               +    GLTE   G+D AA+ ++ ++    
Sbjct: 119 FGSDEQKRQWLPGMATG-------------DLLGCFGLTEPDVGSDPAAMKTRARRDGPD 165

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                G  W  +  ++D  I+ A  +  +  F+VP         G     + +K+  R++
Sbjct: 166 WVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPT-----DTPGFTANTIGHKLSLRAS 220

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
            T EL   N        L  +TG       L  L  A   +    +  A      A+ YA
Sbjct: 221 ITSELVLDNVRLPADAMLPGATGLRA---PLACLSEARYGIVWGAMGAARSAWPCALDYA 277

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R   G  +    + +  + D+A+++     LS  L    D    R ++ ++       
Sbjct: 278 RQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFG------ 331

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL    
Sbjct: 332 -KLNNTREALKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAF 389

Query: 460 KGTNLFE 466
            G   F 
Sbjct: 390 TGLAAFR 396


>gi|323962079|gb|EGB57675.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
          Length = 383

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 138/362 (38%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +              ++AQ+E     +P    A ++ 
Sbjct: 40  REFMRALADNGISMLGVPEEFGGIPADYV-------TQMLAQMEVSKCGAP----AFLIT 88

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +     + +   T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 89  NGQCIHSMRRFGS---AEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 144

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 145 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 203

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 204 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 264 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  VI +A++ +GG GY +E   +R +R+     I  G+   M+      +
Sbjct: 319 --KLYCARTAMEVIDDAIQIMGGLGYTDEARASRFWRDVRCERIGGGTDEIMIYVAGRQI 376

Query: 459 EK 460
            K
Sbjct: 377 LK 378


>gi|253797323|ref|YP_003030324.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 1435]
 gi|289552649|ref|ZP_06441859.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
 gi|297632882|ref|ZP_06950662.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN 4207]
 gi|297729857|ref|ZP_06958975.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN R506]
 gi|313657186|ref|ZP_07814066.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium tuberculosis KZN V2475]
 gi|253318826|gb|ACT23429.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 1435]
 gi|289437281|gb|EFD19774.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 605]
 gi|328457110|gb|AEB02533.1| acyl-CoA dehydrogenase fadE7 [Mycobacterium tuberculosis KZN 4207]
          Length = 395

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 138/424 (32%), Gaps = 38/424 (8%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P  +   L    E  +  T +     A +  P + A+   G+        P   
Sbjct: 8   ALDRDDPLGLDASLSSD-EIAVRDTVRRF--CAEHVNPHVAAWFEDGDL-------PVAR 57

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L ++    GL                 + +    L          +      +   +A 
Sbjct: 58  DLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLVSVQGSLAMFAIAS 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + +               +    GLTE   G+D AA+ ++ ++    
Sbjct: 118 FGSDEQKRQWLPGMATG-------------DLLGCFGLTEPDVGSDPAAMKTRARRDGPD 164

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                G  W  +  ++D  I+ A  +  +  F+VP         G     + +K+  R++
Sbjct: 165 WVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPT-----DTPGFTANTIGHKLSLRAS 219

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
            T EL   N        L  +TG    +  L          ++   R +   A+ YAR+R
Sbjct: 220 ITSELVLDNVRLPADAMLPGATGLRAPLACLSEARYGIVWGAMGAARSAWQCALDYARQR 279

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + +  + D+A+++     LS  L    D    R ++ ++        K 
Sbjct: 280 TQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFG-------KL 332

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              + A  +   A   +GG+G   E  + RH     +     G+   M   VL     G 
Sbjct: 333 NNTREALKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGL 391

Query: 463 NLFE 466
             F 
Sbjct: 392 AAFR 395


>gi|326470196|gb|EGD94205.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326481034|gb|EGE05044.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97]
          Length = 539

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 144/390 (36%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++       K     +    + +   
Sbjct: 155 PYCHEWDEAKAVPESIYKQMGERGYLAGLLGLSYNKDLVKNQVKSVSPDKWDLFHELIVT 214

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P V K       S+E        +      I L +TE
Sbjct: 215 DELSRAGSGGIVWNLIGGFGIGCPPVVKYG-----SKELVERIVPGILAGDKRICLAITE 269

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL 
Sbjct: 270 PDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGPGMGGVSVLLI 329

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +  
Sbjct: 330 ERSAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGI 388

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N  
Sbjct: 389 IIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLV 445

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + ++  E+AA  R+   I                EA +  GG  Y        I R YR
Sbjct: 446 YQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 505

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    K   +F
Sbjct: 506 DVRAYAIPGGSEEIMLDLSMRQSLKVHEIF 535


>gi|11499856|ref|NP_071100.1| acyl-CoA dehydrogenase (acd-12) [Archaeoglobus fulgidus DSM 4304]
 gi|2648245|gb|AAB88979.1| acyl-CoA dehydrogenase (acd-12) [Archaeoglobus fulgidus DSM 4304]
          Length = 411

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 116/315 (36%), Gaps = 37/315 (11%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S +        ++K  +   L  TE   G+D   + +  +   D         W  ++
Sbjct: 106 LASDQTKDAMMPKLEKNQLIGCLAATEPEAGSDTTKLKTTAELDGDEWVLNGTKTWISNA 165

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++D  +++A         +    L D   +      L +K+G R+  T E+   N    
Sbjct: 166 TVADVALVVAT---NREMRMQDMFLVDQVNSPFETSEL-HKLGWRAAPTGEIYLRNCRVP 221

Query: 298 LLGDLNVS--------------------------TGPVEDMKILIYLDSAIMSVSGMRVS 331
               L+V                             P+  +  L+    A+M+    + +
Sbjct: 222 KDNALSVMIQKALSSGGMVEALPIAASISKLYAYMSPLSAVFCLMRSGMALMATGISQAA 281

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  +I YAR+R   G  +    +++  +  +A    ++  L ++      +   +     
Sbjct: 282 LDASIAYARQRKAFGKPIGKFQLIQDMLYKMAAITESSRLLGYKALYMIQKGDPK----- 336

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            AR M+ + K + C+    V   A++  GG G  +E  + R++R++   +I  G+     
Sbjct: 337 -ARYMSSLAKGYACEGCVEVTYNAIQIHGGLGLSDEYPLERYFRDARVMTIPDGTTEIQK 395

Query: 452 LDVLN-LLEKGTNLF 465
           L V   LL KG + +
Sbjct: 396 LIVGRELLGKGFSAY 410


>gi|84500304|ref|ZP_00998570.1| isobutyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84392238|gb|EAQ04506.1| isobutyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 562

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/388 (19%), Positives = 137/388 (35%), Gaps = 44/388 (11%)

Query: 94  WDKVEFHPAWHALLRRSI---------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +KVE H     L  + I           G+       +       +A     +      
Sbjct: 194 VEKVEPHAHEWHLKDQLIPMSVIEELSEMGVFGLTIPENLGGFGLSKASMCVVSEELSRG 253

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T      W PKI S E  PT                TE
Sbjct: 254 YIGVGSLATRSEIAAELILGGGTEEQKSHWVPKIASGEILPTAV-------------FTE 300

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D+A++ ++  K  +         W   +  +    +LA+ +        +   L 
Sbjct: 301 PNTGSDLASLRTRAVKDGEDYRITGNKTWITHAARTHVMTVLARTDPETTDHNGLSMFLA 360

Query: 264 DGSP---------NGLCYQRLKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDM 312
           +  P          G+    ++  +G R     EL F N    G  L       G  + M
Sbjct: 361 EKLPGTDEDPFPSEGMTGGEIE-VLGYRGMKEYELGFDNFHVKGENLLGGKEGQGFRQLM 419

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           K      + +A  ++   + +L   + YA  R   G  L+  P +   +A +A++IA A 
Sbjct: 420 KTFEAARIQTAARAIGVAQAALDVGLQYALDRKAFGQPLVHFPRVSGKLAMMAVEIAVAR 479

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   D  +    EA  A+++         ++A A    A++  GG+G+  E ++
Sbjct: 480 QLTYFSAFEKDNDRRCDLEAGMAKLL-------GARVAWACADNALQIHGGNGFALEYTV 532

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           +R   ++   +I  G+       +   L
Sbjct: 533 SRLLCDARILNIFEGAAEIQAQVIARRL 560


>gi|254701832|ref|ZP_05163660.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261752390|ref|ZP_05996099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|261742143|gb|EEY30069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv.
           5 str. 513]
          Length = 394

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 133/379 (35%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLMAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGCAQTGIQAF 393


>gi|254477236|ref|ZP_05090622.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214031479|gb|EEB72314.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 552

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 136/369 (36%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A     +       +  G L + S  +A ++  
Sbjct: 203 EIIEELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELIIA 262

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     +W PKI S E  PT                TE   G+D+ ++ ++  K   G
Sbjct: 263 GGTEEQKANWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDECG 309

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 310 DYKITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKTPGTDENPFPTEGMTGG 369

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G+       + +      + +A  ++   +
Sbjct: 370 EIE-VLGYRGMKEYELGFDGFHVKRENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQ 428

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI  P +   +A +A++I  A  L++  A   D       E
Sbjct: 429 SALDIAMQYAQDRKQFGKPLIAFPRVASKLAMMAVEIMIARQLTYFSAWEKDNGHRCDLE 488

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 489 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 541

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 542 QAQVIARRL 550


>gi|163787256|ref|ZP_02181703.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
 gi|159877144|gb|EDP71201.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1]
          Length = 392

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 130/370 (35%), Gaps = 34/370 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
                +    A  A    SI  GL        + PV    A   + +   +M ++E G  
Sbjct: 35  RDVSPIIEEAAQKAEFPTSIVSGLAEIGAFGPYIPVEYGGAGLDQISYGLIMQEIERGDS 94

Query: 152 MSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              S  S         +         + + PK+ S E+                 GLTE 
Sbjct: 95  GVRSTASVQSSLVMYPIWKYGNEEQRQKYLPKLASGEW-------------IGSFGLTEP 141

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLED 264
             G++   + +  + + D         W  +SP     ++ A+  EGR+   +V R +E 
Sbjct: 142 DHGSNPGGMVTNFKDMGDHYLLNGAKMWISNSPFCQIAVVWAKNEEGRIHGLIVERGME- 200

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAI 322
               G       NK   R++AT EL F N        L   +G    +  L       A 
Sbjct: 201 ----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAPLGCLDSARFGIAW 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++         A+ Y++ R   G  +    + ++ +A++  +I  A  L++RL    + 
Sbjct: 257 GAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKAQLLAWRLGVMREA 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S + + A+            MA  +  +A + +GG G   E SI RH     +   
Sbjct: 317 GTATSAQISMAKR-------NNVDMALTIARDARQMLGGMGISGEYSIMRHMMNLESVVT 369

Query: 443 LLGSGNAMVL 452
             G+ +  +L
Sbjct: 370 YEGTHDIHLL 379


>gi|254292625|ref|YP_003058648.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
 gi|254041156|gb|ACT57951.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814]
          Length = 576

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 125/362 (34%), Gaps = 37/362 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        F      +      +       +  G L + S  +A ++    T    
Sbjct: 226 ELGVFGLTIPEEFGGFGMGKLAMCVVSEELSRGYIGVGSLGTRSEIAAELILNGGTQAQK 285

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PKI S E  PT                TE   G+D+ A+ ++     +        
Sbjct: 286 EAFLPKIASGEILPTAV-------------FTEPNTGSDLGALRTRATLNGEYWNITGNK 332

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPN---------GLCYQRLKNKIGN 281
            W   +  SD   ++A+ +     F  +   L +             G+    ++  +G 
Sbjct: 333 TWITHASRSDLMTVMARTKPDTTDFRGLSMFLAEKPRGSEDTPFPADGMTGGEIE-VLGY 391

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           R     EL F          L    G     K L+       + +A  ++   + +L   
Sbjct: 392 RGMKEYELGFDGFEVPKENLLGGEAGDGMGFKYLMATFEGARIQTAARAIGTAQAALELG 451

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   GG + + P ++  +  +A ++     L++  A   D  K    EA  A++
Sbjct: 452 LQYALDRQQFGGPIFNFPRVQDKLVMMAAELVGVRQLTYYSAKQKDSGKRCDLEAGMAKL 511

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +         ++A A    A++  GG+G+  E +I+R   ++   +I  G+G    + + 
Sbjct: 512 I-------GARVAWAAADNALQIHGGNGFALEYAISRVLCDARILNIFEGAGEVQAMVIA 564

Query: 456 NL 457
             
Sbjct: 565 RR 566


>gi|326800396|ref|YP_004318215.1| glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
 gi|326551160|gb|ADZ79545.1| Glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21]
          Length = 452

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 134/376 (35%), Gaps = 28/376 (7%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            +K   H  +   L+ +    GL    ++    P        + A  +  +    A    
Sbjct: 100 VNKYWLHDEFPFELIPKFGELGLAGITYNGYGCPNKSFLMEGVLAMEMARVDASIATFFG 159

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  +   + L  +    ++W P+             M K       GLTE   G+  A
Sbjct: 160 VQSGLAMGSIYLCGSEEQKREWLPQ-------------MNKMQKIGAFGLTEPEVGSGAA 206

Query: 213 A-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +T+  ++ ++G       KW  ++  +D  ++ A+             +      G  
Sbjct: 207 GGLTTTCKRTAEGWVLNGQKKWIGNATFADLIVIWARDLDDGQVKG---FILKKDTPGFS 263

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMR 329
            +++K K+  R      +   +        L  +    +   +  +     A M+V   R
Sbjct: 264 VEKIKGKMALRIVQNGLITLKDCVVEEKDRLPHANSFKDTANVLRMTRAGVAWMAVGCAR 323

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ Y R+R   G  +    +++  + ++  ++ A   L FRL+   D  + + E 
Sbjct: 324 GAYESALDYTRKRKQFGKPIASFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEH 383

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A+ A       K +C      ++ +A E +GG+G + E  +AR   ++ A     G+   
Sbjct: 384 ASLA-------KVFCSLRTRDIVGQAREVMGGNGILLEHDVARFVADAEAIYSYEGTKEI 436

Query: 450 MVLDVLNLLEKGTNLF 465
             L V   +  G + F
Sbjct: 437 NSLIVGRAIT-GMSAF 451


>gi|257094593|ref|YP_003168234.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047117|gb|ACV36305.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 389

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 132/397 (33%), Gaps = 40/397 (10%)

Query: 69  TAQELARMANYN--TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             + L R A  N    +L        R  +    PA    +      GL        +  
Sbjct: 18  EDERLVRDAARNYCQGKLAPRVQMAFR--QETSDPAIFREMG---EIGLLGPTIPTEYGG 72

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 ++ + A  +  +       +   S      + +  +    + + P +   E   
Sbjct: 73  AGLNYVSYGLIAREIERVDSGYRSMMSVQSSLVMLPIFVFGSEAQKRRFLPGLARGE--- 129

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                     +    GLTE   G+D  ++ ++      G        W  +SP++D F++
Sbjct: 130 ----------LIGCFGLTEPNHGSDPGSMLARAHPADGGYRLSGTKTWISNSPIADLFVV 179

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ +       +   L +    GL    +  K+G R++ T E+   + F     +L  +
Sbjct: 180 WAKNDAGR----IRGFLLEKGMPGLSTPIIHGKMGLRASITGEIVMDDVFVPADNELPGA 235

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIA 360
           +G          LD+A   ++   +  AE        Y   R   G  L    ++++ +A
Sbjct: 236 SGLK---GPFACLDAARYGIAWGALGAAEDCWLRARRYVLDRQQFGRPLAANQLIQKKLA 292

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+  +I        RL    DE K+       A  +  + K   C  A  +   A +  G
Sbjct: 293 DMQTEITLGLQGCLRLGRLKDEGKA-------APEITSLMKRNSCGKALEIARLARDMHG 345

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G+G  +E  + RH       +   G+ +   L +   
Sbjct: 346 GNGIADEYGVIRHLLNLEVVNTYEGTHDIHALILGRA 382


>gi|254460445|ref|ZP_05073861.1| isobutyryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083]
 gi|206677034|gb|EDZ41521.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
          Length = 562

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 145/389 (37%), Gaps = 45/389 (11%)

Query: 94  WDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +K+E H   WH         ++      G+        +      +A     +      
Sbjct: 193 VEKIEPHAHEWHLKDELIPMEVIDELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRG 252

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T    + W P++ S +  PT                TE
Sbjct: 253 YIGVGSLGTRSEIAAELIIAGGTEEQKQKWLPQLASADTLPTAV-------------FTE 299

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLL 262
              G+D+ A+ ++  K  +G Y ++G+K +++    +    +LA+ +        +   L
Sbjct: 300 PNTGSDLGALRTRAVKDGNGDYRVTGNKTWITHATRTQIMTLLARTDPETDNYKGLSMFL 359

Query: 263 EDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPV 309
            + +P          G+    ++  +G R     EL F          L G+       +
Sbjct: 360 AEKTPGTEENPFPTEGMTGGEIE-VLGYRGMKEYELAFDGFHVKGENLLGGEEGKGFKQL 418

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +      + +A  ++   + +L   + YA  R   G  LI+ P +   +A +A++I  A
Sbjct: 419 METFESARIQTAARAIGVAQSALDIGMQYAEERKQFGKSLINFPRVSSKLAMMAVEIMVA 478

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   DE +    EA  A+++         ++A A    A++  GG+G+  E  
Sbjct: 479 RQLTYFSAREKDEGRRCDLEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYK 531

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I+R   ++   +I  G+       +   L
Sbjct: 532 ISRILCDARILNIFEGAAEIQAQVIARRL 560


>gi|126733736|ref|ZP_01749483.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. CCS2]
 gi|126716602|gb|EBA13466.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. CCS2]
          Length = 561

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 135/371 (36%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A     +       +  G L + S  +A ++  
Sbjct: 213 EIIDEMAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELILC 272

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P + S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 273 GGTEEQKQKWLPGLASAEVLPTAV-------------FTEPNTGSDLGSLRTRAVKQGDD 319

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    MLA+ +        +   L + +P          G+    
Sbjct: 320 WKVTGNKTWITHATRTHVMTMLARTDPDTTDYRGLSMFLAEKTPGTEEKPFPTPGMTGGE 379

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKILI------YLDSAIMSVSG 327
           ++  +G R     EL F    GF + D N+  G   +  K L+       + +A  +V  
Sbjct: 380 IE-VLGYRGMKEYELAFD---GFAIKDENLLGGETGKGFKQLMQTFESARIQTAARAVGV 435

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA+ R   G  LI  P +   +A +A++I  A  L++  A+  D  +   
Sbjct: 436 AQSALDVGMQYAQDRKQFGKSLISFPRVAGKLAMMAVEIMVARQLTYFSADEKDNDRRCD 495

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E  ++R   ++   +I  G+ 
Sbjct: 496 LEAGMAKLL-------GARVAWACADNALQIHGGNGFALEYKVSRILCDARILNIFEGAA 548

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 549 EIQAQVIARRL 559


>gi|158318988|ref|YP_001511496.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158114393|gb|ABW16590.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 609

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 93/516 (18%), Positives = 187/516 (36%), Gaps = 66/516 (12%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              H+ L  L E V      E    A+ + P L      G         P        + 
Sbjct: 36  DTAHEVLAEL-ERVAVGPIAESFEDADRHPPTLDP--ATG-----TVTLPESFRKSFAAA 87

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +G    ++       +        AA   L+    A  +     T A+++  + TP   
Sbjct: 88  QEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTP--- 144

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
                      +         +      + LTE   G+D+ A  ++  +  DG + + G 
Sbjct: 145 -----------WQKKIANWAIERHWGATMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGV 193

Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQR 274
           K F++S   D       ++LA+ EG       +  F+VP+ L D      G+ NG     
Sbjct: 194 KRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPETGAPGARNGAYVTN 253

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           L+ K+G + + T EL F       G+L+GD++     +  +     +     +++ +   
Sbjct: 254 LEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLSTG 313

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ +AR R                  +I+ P ++R +           AL    A  
Sbjct: 314 YLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATF 373

Query: 380 FD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            D         +          ++ PI K    + +  ++A +++ +GGSGY+++  I +
Sbjct: 374 QDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSYELLASSLQVLGGSGYLQDYPIEQ 433

Query: 433 HYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           + R++  +++  G+ +    D+     + +KG  L        E   G +G   +   R+
Sbjct: 434 YIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVKGEAGNGALRAERE 493

Query: 490 SI-SLCKEDKGLARFLTEKIALASSA-AALYRAGMN 523
           S+ +   E + +   +   +   +   + +YR G+N
Sbjct: 494 SLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLN 529


>gi|319440872|ref|ZP_07990028.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702]
          Length = 394

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 118/361 (32%), Gaps = 29/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  +    G+     +          A+ +    +  +       +      +   + 
Sbjct: 50  KELAPKLGDLGVLGMHLEGYGCAGTSAVAYGLACMEIEAIDSGLRSFVSVQGSLAMFAIH 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +++ PK+ + EY                 GLTE   G+D A + ++  +  D
Sbjct: 110 HWGSEEQKENYLPKMAAGEY-------------IGCFGLTEPDAGSDPANMRTRAVRDGD 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  +SP++D  ++ A+ + R  G       + D    G     +  K+  R
Sbjct: 157 EWILNGTKMWITNSPIADVAVVWAKTDDRGDGKPGYAGFILDKGDAGFTAPEIHRKLSLR 216

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIH 337
           ++ T E+   +     L D     G       L  L+ A   +        R +L  AI 
Sbjct: 217 ASVTGEIVLDDCR---LPDSRRLPGVSSLRGPLTCLNEARYGIIWGALGAARNALETAIE 273

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R V    L    + +  +AD+ +++  +  L+ ++    D  K        +    
Sbjct: 274 YTSTRQVFDRPLSSFQLTQAKLADMTVELDKSVLLALQIGRLKDAGK-------LSPHQV 326

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K    ++A  +  E    +G SG   E S  RH     +     G+     L +   
Sbjct: 327 SVGKLNSTRVALEITRECRTLLGASGITLEYSPLRHANNLESVLTYEGTAEMHQLIIGKE 386

Query: 458 L 458
           L
Sbjct: 387 L 387


>gi|312886027|ref|ZP_07745654.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301484|gb|EFQ78526.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM
           18603]
          Length = 452

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 114/313 (36%), Gaps = 26/313 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S  +   + L  +    ++W P+             MQ+       GLTE   G
Sbjct: 156 TFFGVQSGLAMGSIYLCGSEEQKQEWLPR-------------MQQFKAIGAFGLTEPEVG 202

Query: 209 TDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A  +T+  ++  D        KW  ++  +D  ++ A+             L     
Sbjct: 203 SAAAGGLTTTAKRDGDTWILNGQKKWIGNATFADILVIWARDVDDNQVKG---FLLRKDT 259

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSV 325
            G   +++ +K+  R      +   +        L  +    +  K+  +     A  +V
Sbjct: 260 PGFSVEKMHDKMALRIVQNGIITLKDCVIHETDRLQNANSFKDTAKVLQMTRAGVAWQAV 319

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +   A+ Y R+R   G  +    +++  + ++  ++ A   L FRL+   DE K 
Sbjct: 320 GCARGAYESALDYTRKRKQFGKPIASFQLIQNHLVEMLSNLTAMQTLCFRLSQLQDEGKL 379

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E A+ A       K +C      V+++A E +GG+G + E  +AR   ++ A     G
Sbjct: 380 NDEHASLA-------KVFCSLRTRDVVSKAREVMGGNGILLEYDVARFVADAEAIYSYEG 432

Query: 446 SGNAMVLDVLNLL 458
           +     L V   +
Sbjct: 433 TKEINSLIVGRAI 445


>gi|260432763|ref|ZP_05786734.1| isobutyryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416591|gb|EEX09850.1| isobutyryl-CoA dehydrogenase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 563

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 146/398 (36%), Gaps = 47/398 (11%)

Query: 85  HAYGPGGERWDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +    +  D+VE H   WH         ++      G+        +      +A   
Sbjct: 187 EQFRRYAQ--DRVEPHAHEWHLKDELIPMEIIEELAEMGVFGLTIPEEYGGFGLSKASMC 244

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T      W PKI S E  PT         
Sbjct: 245 VVSEELSRGYIGVGSLGTRSEIAAELILAGGTEDQKAQWLPKIASAEILPTAV------- 297

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG 254
                  TE   G+D+ ++ ++  K  +G Y ++G+K +++ +  +    +LA+ +    
Sbjct: 298 ------FTEPNTGSDLGSLRTRAVKDENGDYKITGNKTWITHAARTHVMTLLARTDPNTT 351

Query: 255 -CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLG 300
               +   L + +P          G+    ++  +G R     EL F          L G
Sbjct: 352 DHRGLSMFLAEKTPGTDDNPFPTPGMTGGEIE-VLGYRGMKEYELAFDGFHVKGENLLGG 410

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +      + +A  ++   + +L  A+ YA+ R   G  LI+ P +   +A
Sbjct: 411 EEGKGFKQLMETFESARIQTAARAIGVAQSALDIAMQYAQERKQFGKALINFPRVSGKLA 470

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A++I  A  L++  A   D       EA  A+++         ++A A     ++  G
Sbjct: 471 MMAVEIMIARQLTYFSAWEKDNGHRCDLEAGMAKLL-------GARVAWAAADNGLQIHG 523

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G+  E  I+R   ++   +I  G+       +   L
Sbjct: 524 GNGFALEYKISRVLCDARILNIFEGAAEIQAQVIARRL 561


>gi|315040277|ref|XP_003169516.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
 gi|311346206|gb|EFR05409.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
          Length = 541

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 83/388 (21%), Positives = 151/388 (38%), Gaps = 18/388 (4%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++    +V+ Q   +   +  L  +L
Sbjct: 157 PYCHEWDEAKAVPESIYKQMGERGYLAGLLGLSYNKD---LVKNQVKSVSPDKWDLFHEL 213

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +S + +   +  L+    +      K  S+E        +      I L +TE  
Sbjct: 214 IVTDEISRAGSGGIVWNLIGGFGIGCPPLVKYGSKELVDRIVPGILAGDKRICLAITEPD 273

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL + 
Sbjct: 274 AGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGPGMGGVSVLLIER 333

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
           S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +   I
Sbjct: 334 SAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGIII 392

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N   +
Sbjct: 393 QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLVFQ 449

Query: 383 AKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRES 437
            ++  E+AA  R+   I                EA +  GG  Y        I R YR+ 
Sbjct: 450 CQNMDEDAAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLYRDV 509

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A +I  GS   M+   +    K   +F
Sbjct: 510 RAYAIPGGSEEIMLDLSMRQSLKVHEIF 537


>gi|159042760|ref|YP_001531554.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
 gi|157910520|gb|ABV91953.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12]
          Length = 564

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 147/389 (37%), Gaps = 45/389 (11%)

Query: 94  WDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            DKVE H   WH         ++      G+        +      +A     +      
Sbjct: 195 VDKVEPHAHEWHLKDELIPMEIIEELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRG 254

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T    + W P++ S E  PT                TE
Sbjct: 255 YIGVGSLGTRSEIAAELIICGGTEEQKQKWLPRLASAETLPTAV-------------FTE 301

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLL 262
              G+D+ A+ ++  +  +G + ++G+K +++ +  +    +LA+ +        +   L
Sbjct: 302 PNTGSDLGALRTRAVQDENGDWKVTGNKTWITHAARTHVMTLLARTKPDTTDHRGLSMFL 361

Query: 263 EDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPV 309
            + +P          G+    ++  +G R     EL F N        L G+       +
Sbjct: 362 AEKTPGTDEAPFPTEGMTGGEIE-VLGYRGMKEYELAFDNFHVKGENLLGGEEGKGFKQL 420

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
            +      + +A  ++   + +L  ++ YA  R   G  LI+ P +   +A +A++I  A
Sbjct: 421 METFESARIQTAARAIGVAQSALDVSMQYAIDRKQFGKSLINFPRVSGKLAMMAVEIMVA 480

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E  
Sbjct: 481 RQLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYG 533

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
           I+R   ++   +I  G+       +   L
Sbjct: 534 ISRILCDARILNIFEGAAEIQAQVIARRL 562


>gi|290961561|ref|YP_003492743.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
 gi|260651087|emb|CBG74208.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22]
          Length = 396

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 131/407 (32%), Gaps = 39/407 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G      + 
Sbjct: 26  DLAVRDTVRSWA--ADRVLPHVADWYERGEL-------PGIRELARELGAIGALGMSLEG 76

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   +    +    + W P++ + E
Sbjct: 77  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKRTWLPRMAAGE 136

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        V    GLTE   G+D A++ +  ++            W  +  ++  
Sbjct: 137 -------------VIGCFGLTEPDHGSDPASMRTYAKRDGGDWILNGRKMWITNGSVAGV 183

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            ++ AQ E  V  F+VP         G     +K+K   R++ T EL   +       +L
Sbjct: 184 AVVWAQTEDGVRGFVVPT-----DTPGFSAPEIKHKWSLRASVTSELVLDDVRLPADAVL 238

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            ++    GP+  +           S+   R S   A+ YAR R   G  +    + +  +
Sbjct: 239 PEVKGLKGPLSCLS-HARYGIVWGSMGAARASFESAVAYARTREQFGKPIGGFQLTQAKL 297

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+++     L+  L    D  + R E+           K    + A  +   A   +
Sbjct: 298 ADMAVELHKGILLAHHLGRRMDAGRLRPEQ-------ISFGKLNNVREAIEICRTARTIL 350

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 351 GANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 396


>gi|148260571|ref|YP_001234698.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146402252|gb|ABQ30779.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 599

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 92/543 (16%), Positives = 179/543 (32%), Gaps = 77/543 (14%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGERW-- 94
             D +L  L+     + H           +       ++A  +  P          R+  
Sbjct: 9   DLDFILFDLLGMEELLRHPHFAAFDRDACTQMLDTAQQIAEDHFLPIAAEVDANEPRFVG 68

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +VE        LR     G     + +    +   +     A+ ++  A     +    
Sbjct: 69  GRVEMPEGTGHALRACAEAGFFALPFAQEHGGLQAPRVLHTAASGIFTCANTAVANYAFL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++A      + + + P +    +  T             + L+E + G+ +A I
Sbjct: 129 TVGAANLLAAFGAEPLRRRFLPPMLEGRWFGT-------------MCLSEPQAGSSLADI 175

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLE 263
           T+     +DG + L G K ++S    +       ++LA++ G       +  FLVP+   
Sbjct: 176 TTTATPRADGTFSLRGSKMWISGGDQEISENIVHMVLARIAGAPAGTRGISLFLVPKRRV 235

Query: 264 D-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
           D     G  N +    L +K+G R      L F     T G L+G  +     +  M   
Sbjct: 236 DESGAVGESNNIALAGLNHKMGQRGTTNCLLNFGESGETIGHLIGAPHRGLEYMFQMMNE 295

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIAL 364
             +     +          +  YAR R                 +++   ++R +     
Sbjct: 296 ARIGVGHAATMSALAGYRHSADYARTRTQGRRAGQKDPSAPPVPIVEHADIRRMLLAQKA 355

Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            +  A AL    A   D      +A  ++   A   ++ P+ K W  +        AM+ 
Sbjct: 356 AVEGAQALCLYAAQLVDRQEIATDADEKAWLGALLGLLTPVVKSWPSEHCLEANKWAMQI 415

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           +GG GY  +  + R YR++  N I  G+     +D++     G             D G 
Sbjct: 416 LGGYGYTRDYPLERLYRDNRLNHIHEGTFGIQGIDLVGRKLGG-------------DKGD 462

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKI-----------ALASSAAALYRAGMNDIA- 526
           + ++    +R++ +       LA      +           AL + A    R     +  
Sbjct: 463 ALRRFAAQMRETAATAARQPALANEAARLVAALDQLGVTADALLACADLPRRLANATVFL 522

Query: 527 DVF 529
           D F
Sbjct: 523 DAF 525


>gi|84515514|ref|ZP_01002876.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84510797|gb|EAQ07252.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 407

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 131/372 (35%), Gaps = 37/372 (9%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSA 159
           P    L+      GL        +  +      + + A  +  +       +   S    
Sbjct: 65  PEIFTLMG---EAGLLGLTIPEEYGGLGAGYVTYGLVAREIERVDSGYRSMMSVQSSLVM 121

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    + + P +                ++    GLTE   G+D A + +  +
Sbjct: 122 YPIHAYGSDAQREKYLPGL-------------AAGTLIGCFGLTEPDAGSDPAGMKTTAK 168

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K + G        W  ++P++D F++ A+ E   G   +   + D    GL   ++  K+
Sbjct: 169 KTAGGYVLNGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLDKGMKGLSAPKVGGKL 226

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+   N         +     V+ +K     L+ A   ++   +  AEA  +
Sbjct: 227 SLRASVTGEIVMDNVEV----GEDALLPGVQGLKGPFGCLNRARYGIAWGVMGAAEACWH 282

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L    + ++ +AD+  +IA  T  + +L    +  ++       A
Sbjct: 283 AARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIALGTQAALQLGRLMETGRA-------A 335

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K   C  A  +   + +  GG+G  E+  I RH       +   G+ +   L 
Sbjct: 336 PEMISLMKRNNCGKALDIARASRDMHGGNGISEDFQIMRHMVNLETVNTYEGTHDVHAL- 394

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 395 ILGRAQTGLQAF 406


>gi|332291488|ref|YP_004430097.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169574|gb|AEE18829.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 392

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 137/365 (37%), Gaps = 41/365 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +    +
Sbjct: 57  GLAEIGAFGPYIPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIYKYGS 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + PK+ S E+                 GLTE   G++ + + +  + + D    
Sbjct: 117 EEQRNKFLPKLASGEFMG-------------SFGLTEPDHGSNPSGMVTNFKDMGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                W  +SP  D  ++ A+  EGR+   +V R +E     G       NK   R++AT
Sbjct: 164 NGAKLWISNSPFCDVAVVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            EL F +         N+          L  LDSA   ++   +  A      A+ YA+ 
Sbjct: 219 GELIFQDVKVP---KENLLPNKSGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    + ++ +A++  +I  A  L+ RL    +E ++ S + + A+       
Sbjct: 276 RIQFGKPIAAFQLQQKKLAEMITEITKAQLLALRLGQLKNEDRATSAQISMAKR------ 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
               +MA  +  EA + +GG G   E SI RH     +     G+ +  +L +  L   G
Sbjct: 330 -NNVEMALKIAREARQILGGMGITGEYSIMRHMMNLESVITYEGTHDIHLL-ITGLDITG 387

Query: 462 TNLFE 466
            N F+
Sbjct: 388 ENAFK 392


>gi|150024452|ref|YP_001295278.1| glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
 gi|149770993|emb|CAL42460.1| Glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86]
          Length = 392

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 141/379 (37%), Gaps = 45/379 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K E  P      +R+     I  GL        + PV    A   + +   +M +
Sbjct: 29  ARAWVKKEVSPIIEDFAQRAEFPKQIVKGLGEIGGFGPYIPVEYGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S +S         +           + PK+ + E+                
Sbjct: 89  IERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKLATGEF-------------IGC 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G+D  ++ +  + + D         W  ++P +D  ++ A+  EGR+   +V
Sbjct: 136 FGLTEPNYGSDPGSMITNYKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F N        L   +G       L  L
Sbjct: 196 ERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKANLLPNKSGLGA---PLGCL 247

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   ++   +  A      A+ YA+ R      +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARYGIAWGAIGAAMDCYDTALRYAKERIQFDKPIAGTQLQQKKLAEMITEITKAQLLT 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    +E ++ + + + A+            MA  +  EA + +GG G   E SI RH
Sbjct: 308 WRLGVLRNEGRATTAQISMAKR-------NNVDMAINIAREARQILGGMGITGEYSIMRH 360

Query: 434 YRESPANSILLGSGNAMVL 452
                +     G+ +  +L
Sbjct: 361 MMNLESVITYEGTHDIHLL 379


>gi|41406130|ref|NP_958966.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118466848|ref|YP_879339.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773084|ref|ZP_05214600.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|41394478|gb|AAS02349.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118168135|gb|ABK69032.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 460

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 138/390 (35%), Gaps = 39/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+ +  P W  L   +   G +  ++ R         +  +    L+       
Sbjct: 28  PVALEYDQRQEFP-WPVLEE-AARRGFYSPLFYRDLIGDPTGISLPMFMEELF-WGCAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + S +    +P    +WAP+ F             K      L ++E  GG
Sbjct: 85  GLAIVMPALALSAIGQAASPEQMLEWAPECFGT-------PGDLK---LAALAISEPEGG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + ++ ++  D         W  +  +++  ++ A V+  +G       +  G   
Sbjct: 135 SDVRNLRTRARRDGDDWIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVPGGTP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---------------VSTGPVEDMK 313
           GL   R  +K+G R++ T EL F          L                V+ G      
Sbjct: 195 GLKMVRKLDKLGCRASHTAELLFEGVRVPAANLLGGQEKLEHKLAKAREVVAGGKRSGSA 254

Query: 314 IL-----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L          A  ++   R +L  A  YA  R   G  +ID   +   +A++A  I A
Sbjct: 255 TLGTFEQTRPMVAAQAIGIARAALEYATSYATEREAFGAPIIDNQGIAFPLAELATQIDA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R +                     ++K    ++A      A++ +GG GYI + 
Sbjct: 315 ARLLTWRASWMAANNVPFER------GEGSMSKMAASEVAVKATERAVQTLGGWGYITDH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + + YR++   +I  G+     + V N L
Sbjct: 369 PVEKWYRDAKLYTIFEGTSEIQRMVVSNAL 398


>gi|302653360|ref|XP_003018507.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517]
 gi|291182158|gb|EFE37862.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517]
          Length = 540

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 144/390 (36%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++       K     +    + +   
Sbjct: 156 PYCHEWDEAKAVPESIYKQMGERGYLAGLLGLSYNKDLVKNQVKSVSPEKWDLFHELIVT 215

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P V K       S+E        +      I L +TE
Sbjct: 216 DELSRAGSGGIVWNLIGGFGIGCPPVVKYG-----SKELVERIVPGILAGDKRICLAITE 270

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL 
Sbjct: 271 PDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGPGMGGVSVLLI 330

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +  
Sbjct: 331 ERSAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGI 389

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N  
Sbjct: 390 IIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLV 446

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + ++  E+AA  R+   I                EA +  GG  Y        I R YR
Sbjct: 447 FQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 506

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    K   +F
Sbjct: 507 DVRAYAIPGGSEEIMLDLSMRQSLKVHEIF 536


>gi|302507358|ref|XP_003015640.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371]
 gi|291179208|gb|EFE34995.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371]
          Length = 540

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 144/390 (36%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++       K     +    + +   
Sbjct: 156 PYCHEWDEAKAVPESIYKQMGERGYLAGLLGLSYNKDLVKNQVKSVSPEKWDLFHELIVT 215

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P V K       S+E        +      I L +TE
Sbjct: 216 DELSRAGSGGIVWNLIGGFGIGCPPVVKYG-----SKELVERIVPGILAGDKRICLAITE 270

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL 
Sbjct: 271 PDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGPGMGGVSVLLI 330

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +  
Sbjct: 331 ERSAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGI 389

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N  
Sbjct: 390 IIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLV 446

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + ++  E+AA  R+   I                EA +  GG  Y        I R YR
Sbjct: 447 FQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 506

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    K   +F
Sbjct: 507 DVRAYAIPGGSEEIMLDLSMRQSLKVHEIF 536


>gi|85374667|ref|YP_458729.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter
           litoralis HTCC2594]
 gi|84787750|gb|ABC63932.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter
           litoralis HTCC2594]
          Length = 391

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 138/403 (34%), Gaps = 48/403 (11%)

Query: 69  TAQELARMANYNTP--QLHAY--GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             + + R A +     +L            D  E  P    L+ ++   GL  +     +
Sbjct: 18  EDERMIRDAAHGFAQSELQPRVIEAFSNEVDAPELFP----LMGQA---GLLGATIPEEY 70

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   A+ + A  +  +           S      +    +    + + P + S E 
Sbjct: 71  GGAGAGYVAYGLIAREIERVDSGYRSMASVQSSLVMYPIHAFGSEEQKRKYLPGLASGE- 129

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       +    GLTE   G+D A + +  +K  DG        W  +SP +D F
Sbjct: 130 ------------LIGCFGLTEPDAGSDPAGMKTVAKKNGDGYIISGSKTWISNSPFADVF 177

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLG 300
           ++ A+ E   G   +   + +   +GL   +++ KI  R++ T  +           LL 
Sbjct: 178 VVWAKSEEHGG--GIRGFVLEKGMDGLSAPKIEGKISLRASTTGMIVMDEVKVGADALLP 235

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
           D+    GP         L+ A   +S   +  AE   +A R     R   G  L  + + 
Sbjct: 236 DVQGLKGP------FSCLNRARYGISWGSMGAAEFCMHAARQYGLDRQQFGVPLASKQLY 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  ++++  +IA     S R+    DE K       +A  M  I K      A  +   A
Sbjct: 290 QLKLSNMMSEIALGLQASLRVGRLMDEGK-------FAPEMISIVKRNNVGKALDIARAA 342

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG+G  EE  + RH       +   G+ +   L +   +
Sbjct: 343 RDMHGGNGISEEYQVIRHMVNLETVNTYEGTHDVHALILGRAI 385


>gi|254453585|ref|ZP_05067022.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198267991|gb|EDY92261.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 406

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 125/365 (34%), Gaps = 34/365 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R+    GL        +  +      + + A  +  +       +   S      +    
Sbjct: 68  RQMGDAGLLGLTIPEEYGGLGAGYVTYGLVAREIERVDSGYRSMMSVQSSLVMYPIHAYG 127

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    K + P + S E             +    GLTE   G+D A + ++  K   G  
Sbjct: 128 SEAQRKKFLPGLASGE-------------LIGCFGLTEPDAGSDPAGMKTRAVKTPTGYK 174

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  ++P++D F++ A+ +   G   +   + +    GL   ++  K+  R++ T
Sbjct: 175 ISGAKMWISNAPIADVFVVWAKSDEHGGK--IRGFILEKGMTGLTAPKIGGKLSLRASVT 232

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYAR----- 340
            E+             +     V+ +K     L+ A   ++   +  AE   +A      
Sbjct: 233 GEVVMDGVEV----GEDALLPNVQGLKGPFGCLNRARYGIAWGVIGAAEFCWHAALRYGL 288

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    + ++ +AD+  +I      + +L    D  K+       A  M  + 
Sbjct: 289 DRKQFGKPLAQTQLFQKKLADMQTEITLGLQSALQLGRLMDAGKA-------APAMISMM 341

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +   + +  GG+G  +E  I RH       +   G+ +   L +L   + 
Sbjct: 342 KRNNCGKALDIARASRDMHGGNGISDEFHIMRHMVNLETVNTYEGTHDVHAL-ILGRAQT 400

Query: 461 GTNLF 465
           G   F
Sbjct: 401 GLQAF 405


>gi|257388204|ref|YP_003177977.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170511|gb|ACV48270.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 384

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 134/398 (33%), Gaps = 31/398 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWD 121
           E V+   A+++ + A     +     P  + + ++ E+      +L   +  GL      
Sbjct: 6   ETVVPEEARDIKQEAREFAAE--HIEPNAQEYYERGEYP---VDILEEGMEAGLVAQDIG 60

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +          +  A  +  A       +  +   A M+         +++       
Sbjct: 61  EEYGGRGLSLQQVLAMAEEFYKADAGIALTLQLASFGAEMLEDHGNEEQKEEYL------ 114

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                   P+ +     GL ++E   G+D+A + +  +K  D         W  +   +D
Sbjct: 115 -------RPVAENEQLTGLAVSEPETGSDMAGMQTTAEKDGDEYVLNGEKYWIGNGVEAD 167

Query: 242 AFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              + A+   +           +     +G   + +  K+G R++    + F +      
Sbjct: 168 WVTVYAKTGDDPNNRYGNYSLFIVPTDTDGYDAEHIPEKMGFRASKQAHIVFDDCRVPEE 227

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            ++G        + +      +  A   +     ++ EA  +   R   G  + +   ++
Sbjct: 228 NVIGHEGAGFYMLAEFFNHGRVIVAGHGLGLAAAAIEEAWEFVHDREAFGKSVDEFQAVQ 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ ++  +A AL++R A+     +     AA A+  A      C +         M
Sbjct: 288 HKLADMRMEFESARALTWRAADKVANQEDAGFWAAMAKTKATEVSTQCAEKG-------M 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +  GG   + E  I+R YR+     I  G+ +     +
Sbjct: 341 QLHGGRSVLTENRISRVYRDVRIPVIYEGANDIQRNLI 378


>gi|296282328|ref|ZP_06860326.1| glutaryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 391

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 119/364 (32%), Gaps = 34/364 (9%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           P    L+ ++   GL  +     +        A+ + A  +  +           S    
Sbjct: 50  PELFPLMGKA---GLLGATIPEEYGGAGAGYVAYGLIAREIERVDSGYRSMASVQSSLVM 106

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +    K + P + S E             +    GLTE   G+D A + +  +
Sbjct: 107 YPIHAFGSEEQKKKYLPGLASGE-------------LIGCFGLTEPDAGSDPAGMKTVAK 153

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K  D         W  +SP +D F++ A+ E   G   +   + +    GL   +++ KI
Sbjct: 154 KDGDDYVISGSKTWISNSPFADVFVVWAKSEEHGGA--IRGFVLEKGMEGLSAPKIEGKI 211

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
             R++ T  +                 G          L+ A   +S   +  AE     
Sbjct: 212 SLRASTTGMIMMDEVRVPASAMFPEVQGLKGPFN---CLNRARYGISWGAMGAAEFCMDA 268

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  Y   R   G  L  + + +  +AD+  +IA     S R+    DE     +      
Sbjct: 269 AKQYGLDRQQFGVPLASKQLYQLKLADMLTEIALGLQASLRVGRLMDEGNWSPD------ 322

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  I K      A  +   + +  GG+G  EE  + RH       +   G+ +   L +
Sbjct: 323 -MVSIVKRNNVGKALNIARVSRDMHGGNGISEEYQVIRHMVNLETVNTYEGTHDVHALIL 381

Query: 455 LNLL 458
              +
Sbjct: 382 GRAI 385


>gi|296818839|ref|XP_002849756.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS
           113480]
 gi|238840209|gb|EEQ29871.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS
           113480]
          Length = 542

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 77/390 (19%), Positives = 142/390 (36%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++       K     +    + +   
Sbjct: 158 PYCHEWDEAKSVPESIYKQMGDRGYLAGLLGLSYNKDLVQNHVKSVPPEKWDLFHELIVT 217

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P + K       S+E        +      I L +TE
Sbjct: 218 DELSRAGSGGVVWNLIGGFGIGCPPLVKYG-----SKELVKRILPGILAGDKRICLAITE 272

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL 
Sbjct: 273 PGAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGEPGMGGVSVLLI 332

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +  
Sbjct: 333 ERSMGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGI 391

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N  
Sbjct: 392 IIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLV 448

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +   E+ A  R+   I                EA +  GG  Y        + R YR
Sbjct: 449 FQCQHMDEDTAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKVERLYR 508

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    K   +F
Sbjct: 509 DVRAYAIPGGSEEIMLDLSMRQSLKVHEIF 538


>gi|327297831|ref|XP_003233609.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326463787|gb|EGD89240.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 540

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/390 (20%), Positives = 144/390 (36%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +++       K     +    + +   
Sbjct: 156 PYCHEWDEAKAVPENIYKQMGERGYLAGLLGLSYNKDLVKNQVKSVSPDKWDLFHELIVT 215

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P V K       S+E        +      I L +TE
Sbjct: 216 DELSRAGSGGIVWNLIGGFGIGCPPVVKYG-----SKELVERIVPGILAGDKRICLAITE 270

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ ++ + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL 
Sbjct: 271 PDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGPGMGGVSVLLI 330

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  S+ T  + F +     G L+G  N     +        +  
Sbjct: 331 ERSAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTNFNHERMGI 389

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L N  
Sbjct: 390 IIQCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASFNW---LENLV 446

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + ++  E+AA  R+   I                EA +  GG  Y        I R YR
Sbjct: 447 FQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 506

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    K   +F
Sbjct: 507 DVRAYAIPGGSEEIMLDLSMRQSLKVHEIF 536


>gi|88802009|ref|ZP_01117537.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
 gi|88782667|gb|EAR13844.1| Acyl-CoA dehydrogenase-like protein [Polaribacter irgensii 23-P]
          Length = 392

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 115/304 (37%), Gaps = 34/304 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +         K + PK+ S E+                 GLTE   G++ A +
Sbjct: 104 SSLVMYPIFTYGNETQRKKYLPKLASGEWMG-------------CFGLTEPNHGSNPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQ 273
            +      D         W  ++P +   ++ A+  EGR+   LV R +E     G    
Sbjct: 151 ETSFVDKGDHYLLNGAKMWISNAPFAHVAVVWAKNEEGRIHGLLVERGME-----GFSTP 205

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
              NK   R++AT EL F+N         N+          L  LDSA   ++   +  A
Sbjct: 206 ETHNKWSLRASATGELIFNNVKVP---KENILPNKSGLGAPLGCLDSARFGIAWGAIGAA 262

Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                 A+ Y++ R   G  +    + ++ +A++  +I  A  L++RL    +E  + S 
Sbjct: 263 MDCYDTALRYSKEREQFGRPIGQFQLQQKKLAEMITEITKAQLLAWRLGTLKNEGNASSA 322

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + + A+           +MA  +   A + +GG G   E SI RH     +     G+ +
Sbjct: 323 QISMAKR-------NNVEMAVKIARAARQMLGGMGITGEYSIMRHMMNLESVLTYEGTHD 375

Query: 449 AMVL 452
             +L
Sbjct: 376 IHLL 379


>gi|294675581|ref|YP_003576196.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
 gi|294474401|gb|ADE83789.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003]
          Length = 402

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 137/412 (33%), Gaps = 39/412 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
               L L G+          A  A Y   +L           + E  PA    +      
Sbjct: 16  WDDPLRLNGQLSEEERMLRDAARA-YAQEKLQPRVIRAFA--EEETDPAIFREMG---QM 69

Query: 114 GLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL        +  +     A+ + A  +  +       +   S      +    T    +
Sbjct: 70  GLLGVTIPEEYGGLGASYVAYGLVAREIERVDSGYRSMMSVQSSLVMYPIYAYGTEDQRR 129

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + PK+ S E+                 GLTE   G+D A++ +  +K +DG        
Sbjct: 130 KYLPKLASGEW-------------IGCFGLTEPDAGSDPASLKTVAKKTADGYVLTGSKM 176

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++P++D F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+   
Sbjct: 177 WISNAPIADVFVVWAKSEAHGGK--IKGFVLEKGLKGLSAPKIAGKLSLRASITGEIVME 234

Query: 293 NTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSG 346
                     +     VE +K     L+ A   ++   +  AE   +A R     R    
Sbjct: 235 GVEV----GEDALLPGVEGLKGPFGCLNRARYGIAWGVMGAAEFCFHAARQYGLDRKQFD 290

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    + +  +A++  DI      + ++    DEA +       A  M  + K   C 
Sbjct: 291 KPLAQTQLYQLKLANMLTDITLGLQAALQVGRLMDEANA-------APEMISLIKRNNCG 343

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A      A +  GG+G  E   + RH       +   G+ +   L +   +
Sbjct: 344 KALEAARNARDMHGGNGISESFQVIRHMVNLETVNTYEGTHDVHALILGRAV 395


>gi|83941545|ref|ZP_00954007.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83847365|gb|EAP85240.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 561

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 139/397 (35%), Gaps = 46/397 (11%)

Query: 85  HAYGPGGERWDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       +KVE F   WH         ++      G+        F      +A   
Sbjct: 186 EQFRRYA--VEKVEPFAHEWHLKDELIPIEVINELAEMGVFGLTIPEEFGGFGLSKASMC 243

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T    + W P+I S E  PT         
Sbjct: 244 VVSEELSRGYIGVGSLGTRSEIAAELIIAGGTDAQKEKWLPRIASAETLPTAV------- 296

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254
                  TE   G+D+ ++ ++  K  D         W   +  +    +LA+ + +   
Sbjct: 297 ------FTEPNTGSDLGSLRTRAVKDGDDYKITGNKTWITHAARTHVMTLLARTDPQTSN 350

Query: 255 CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGD 301
              +   L + +P          G+    ++  +G R     EL F          L G+
Sbjct: 351 YKGLSMFLAEKTPGDDANPFPSEGMTGGEIE-VLGYRGMKEYELGFDGFHVKGENLLGGE 409

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +      + +A  ++   + +L  ++ YA  R   G  LI+ P +   +A 
Sbjct: 410 EGKGFKQLMETFESARIQTAARAIGVAQSALDISMQYAIDRKQFGKSLINFPRVSSKLAM 469

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A++I  A  L++  A   DE +    EA  A+++         ++A A     ++  GG
Sbjct: 470 MAVEIMIARQLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGG 522

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G+  E  I+R   ++   +I  G+       +   L
Sbjct: 523 NGFALEYKISRVLCDARILNIFEGAAEIQAQVISRRL 559


>gi|115397873|ref|XP_001214528.1| hypothetical protein ATEG_05350 [Aspergillus terreus NIH2624]
 gi|114192719|gb|EAU34419.1| hypothetical protein ATEG_05350 [Aspergillus terreus NIH2624]
          Length = 541

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 136/381 (35%), Gaps = 22/381 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +  +  P   +          + M   
Sbjct: 157 PYVTEWDEGKKVPDHIYKQMGERGYLAGLLGVKYPVNHTPYRVQSVAPENWDLFHEMLLT 216

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +    +       +++       P + K     +  R         +      I L +TE
Sbjct: 217 DELSRVGSGGLVWNLIGGYGIGCPPLVKFGKKPLVDR-----ILPGILAGEKRICLAITE 271

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 272 PDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGGDGMNGISVLLI 331

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 332 EREAGGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENQGFKVIMTNFNHERIGI 390

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A       L N  
Sbjct: 391 VIQCVRFARVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAQMARQIEATYNW---LENII 447

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +S  E  A  ++   I        +       EA +  GG  Y        I R YR
Sbjct: 448 FQCQSMEETEAMLKLGGAIAGLKAQSTQTFEFCAREASQIFGGLSYSRGGQGGKIERLYR 507

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +  A +I  GS   M+   + 
Sbjct: 508 DVRAYAIPGGSEEIMLDLSMR 528


>gi|17987180|ref|NP_539814.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|256044744|ref|ZP_05447648.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565653|ref|ZP_05836137.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265991166|ref|ZP_06103723.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|17982848|gb|AAL52078.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|260151721|gb|EEW86815.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263001950|gb|EEZ14525.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 394

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 132/379 (34%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+  R++ T E+           +L +++   GP          + A   +S   + 
Sbjct: 209 IGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCFNRARYGISWGVIG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGIQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|325953837|ref|YP_004237497.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323436455|gb|ADX66919.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 387

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 129/362 (35%), Gaps = 39/362 (10%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTTP 168
           L        + P     A   + +   +M +LEAG     S  S         +    + 
Sbjct: 54  LGAIGALGPYIPEEYGGAGLDQISYGLIMQELEAGDSAVRSAASVQSSLVMYPIFTYGSE 113

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PK+ S E                  GLTE   G++ A + ++ +K  D     
Sbjct: 114 EQKRKYLPKLASGEM-------------IGCFGLTEPNHGSNPAGMETKLKKEGDHYILN 160

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  ++P+ D  ++ A+ E       +  ++ +    G        K   R++ T E
Sbjct: 161 GAKMWITNAPICDIAVVWARNEEGK----ISGVIVERYMEGFSTPETMQKWSLRASRTGE 216

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343
           L F N         N+  G       L  L+SA   +S   +  A      A+ Y+  R 
Sbjct: 217 LVFENVKIPA---ENILPGVNSLRGPLSCLNSARYGISWGAIGAAIDCYEVALQYSLERT 273

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    + ++ +A+   +I  A  + +RL    +E K+   + + A+         
Sbjct: 274 QFGKPIASYQLQQKKLAEFITEITKAQLMVWRLGTLKNEDKATPAQISMAKR-------N 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             K+A  +  E+ + +G  G + +  + RH     +     G+ +  +L   N +  G N
Sbjct: 327 SVKIALDIARESRQILGAMGIVGDYPMMRHAANLESVITYEGTHDVHLLITGNDIT-GIN 385

Query: 464 LF 465
            F
Sbjct: 386 AF 387


>gi|89889429|ref|ZP_01200940.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
 gi|89517702|gb|EAS20358.1| glutaryl-CoA dehydrogenase [Flavobacteria bacterium BBFL7]
          Length = 392

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 134/363 (36%), Gaps = 39/363 (10%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +    T
Sbjct: 57  GLASIGAFGPYIPEEYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGT 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ S E+                 GLTE   G++   + ++ +   D I  
Sbjct: 117 EEQKKKFLPKLASGEFMG-------------SFGLTEPDHGSNPGGMVTRFKDAGDHIIL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +SP  D  ++ A+ +       V   L +    G       NK   R++AT 
Sbjct: 164 NGAKLWISNSPFCDVAVVWAK-DENDRIHGV---LVERGMEGFTTPETHNKWSLRASATG 219

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342
           EL F +         N+  G       L  LDSA   ++   +  A      A+ Y++ R
Sbjct: 220 ELIFQDVKIPKS---NILPGRSGLGAPLSCLDSARFGIAWGAIGAAMDCYDTALRYSKER 276

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + ++ +A++  +I  A  L++RL    ++ K+ S + + A+        
Sbjct: 277 IQFGKPIAGFQLQQKKLAEMITEITKAQLLAWRLGVLREQGKATSAQISMAKR------- 329

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              ++A  +  EA + +GG G   E SI RH     +     G+ +  +L +  L   G 
Sbjct: 330 NNVEIAINIAREARQMLGGMGITGEYSIMRHSMNLESVITYEGTHDIHLL-ITGLDITGE 388

Query: 463 NLF 465
           N F
Sbjct: 389 NAF 391


>gi|56695488|ref|YP_165835.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56677225|gb|AAV93891.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 132/358 (36%), Gaps = 22/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L ++    G+        +  +    A              E       S  +A++  
Sbjct: 42  WELHQKLGALGVFGFGIPEEYGGLGFDDA-------FMRCDYAELAFGCGASGVAAAVGG 94

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            M +      +AP+ F ++  P     + +  +   L +TE  GG+D+A ++++  +++ 
Sbjct: 95  RMISLGPMVQFAPEPFRQDILPR----IVRGEMNSALAITEPGGGSDVANLSTRAARVAG 150

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        +      +  F++ A+  G  G   +   L +    G     L  K+G   
Sbjct: 151 GWVLNGAKAYITGGMDAQWFVVGART-GGPGLAGISLFLIEADTPGFSRTPLGGKMGWHC 209

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +    L F +       L+G  N     + +      L     S+  MRV    A+ +AR
Sbjct: 210 STQAMLHFDDCHVPEAALIGPENKGFLAIMNNFNHERLAMVAGSLGMMRVCYRSALDWAR 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  LI+  V+    A+++  I    A   R+  + ++    + E A A++ A   
Sbjct: 270 ERRTFGQRLIEHQVIAHKFAEMSARIDMTEAYLERICWAMNQGLMPAAEIAKAKVQATKA 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +       V +E M+  GG+GY+    + R +RE    +I  GS   +    +  +
Sbjct: 330 LEF-------VASEGMQIFGGAGYLTGNPVERVWREVKVMAIGGGSEEILRDLAVRQM 380


>gi|89068959|ref|ZP_01156341.1| putative glutaryl-CoA dehydrogenase protein [Oceanicola granulosus
           HTCC2516]
 gi|89045540|gb|EAR51604.1| putative glutaryl-CoA dehydrogenase protein [Oceanicola granulosus
           HTCC2516]
          Length = 417

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/458 (17%), Positives = 148/458 (32%), Gaps = 49/458 (10%)

Query: 15  VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74
           + +  ++   L+     I  N       L  L    P  +  +L    E +L   A++ A
Sbjct: 1   MPREEETPMTLDHAAPAISGN---DSPSLAPLDWTDPLGLEAQLSED-ERMLRDAARQFA 56

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
                    L        R + VE  P    L+      GL        +  +       
Sbjct: 57  EE------VLAPRIIDAYREETVE--PEIFRLMG---EAGLLGPTIPEEYGGLGAGYVTY 105

Query: 135 IRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
              AR           +MS  S      +    +    + + P +   E           
Sbjct: 106 GLIAREVERVDSGYRSMMSVQSSLVMYPINAYGSDAQKERYLPGLARGE----------- 154

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +    GLTE   G+D   + ++  KI  G        W  ++P++D F++ A+ E   
Sbjct: 155 --LIGCFGLTEPDAGSDPGGMKTKAVKIDGGYRISGAKTWISNAPIADVFVVWAKSEAHG 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G   +   + +    GL   ++  K+  R++ T E+             +     VE +K
Sbjct: 213 GK--IRGFVLEKGAKGLSAPKIGGKLSLRASVTGEIVLDGVEV----GEDALLPGVEGLK 266

Query: 314 I-LIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIA 367
                L+ A   ++   +  AE   +A       R   G  +    + ++ +AD+  +IA
Sbjct: 267 GPFGCLNRARYGIAWGTMGAAEYCWHAARTYGLERKQFGRPIAQTQLFQKKLADMQTEIA 326

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                +  L    +   +  E          + K   C  A  +   A +  GG+G  EE
Sbjct: 327 LGLNGALALGRMMEAHTASPEA-------ISLMKRNNCGKALEIARMARDMHGGNGISEE 379

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             + RH       +   G+ +   L +L   + G   F
Sbjct: 380 YQVMRHAANLETVNTYEGTHDIHAL-ILGRAQTGLQAF 416


>gi|240168861|ref|ZP_04747520.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium kansasii ATCC 12478]
          Length = 395

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 118/368 (32%), Gaps = 28/368 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L ++    GL                 + +    L          +      +  
Sbjct: 54  PVARELAKQFGQLGLLGMHLHGYGCGGSSAVHYGLACLELEAADSGIRSLVSVQGSLAMF 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + W P++ + E             +    GLTE   G+D AA+ ++ ++
Sbjct: 114 AIWHNGSEEQKQQWLPRMAAGE-------------LVGCFGLTEPDAGSDPAAMKTRARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++D  I+ A  +  +  F+VP         G     + +K+ 
Sbjct: 161 DGSDWVLDGRKMWITNGSIADLAIVWAGTDEGIRGFIVPT-----DTPGFTANTIHHKLS 215

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R++ T EL   +        L  + G    +  L       A  ++   R +   A+ Y
Sbjct: 216 LRASITSELVLDDVRLPAEAMLPNAIGLRAPLACLSEARYGIAWGAMGAARSAWQSALDY 275

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +    + +  + D+A+++     L+  L    D    R E+ ++      
Sbjct: 276 ATHRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLALHLGRLKDRVGLRPEQVSFG----- 330

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL   
Sbjct: 331 --KLNNTREAIEICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQA 387

Query: 459 EKGTNLFE 466
             G   F 
Sbjct: 388 FTGLAAFR 395


>gi|206559699|ref|YP_002230463.1| putative Acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198035740|emb|CAR51631.1| putative Acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 609

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 97/567 (17%), Positives = 188/567 (33%), Gaps = 82/567 (14%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD--KVE 98
           LL   +     V                     R+A +   P          R+D  +V 
Sbjct: 13  LLYDWLDAEALVALPRYAEHSRETFDAVLDTSERIAEDLFAPHAARGDRDEPRFDGERVT 72

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P     +R     GL  +  D +   +   +  +  +   +  A +        +V +
Sbjct: 73  LIPEVEPAVRAFADAGLIAAGHDEALGGMRLPKLVEAASFLFFQAANIATAAYPFLTVAN 132

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A+++    +      +A              P  +      + L+E + G+ ++ I ++ 
Sbjct: 133 ANLLVAHGSAAQIDAFA-------------RPELEGRFLGTMCLSEPQAGSSLSDIATRA 179

Query: 219 QKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----------CFLVP 259
               D      Y L+G+K ++S    +       ++LA++    G           F+VP
Sbjct: 180 DFECDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDEHGRLQPGTRGISLFIVP 239

Query: 260 RLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEFS-----------NTFGFLLGDL 302
           + L   DG  NG    +    L +K+G R      L F               G+L+G  
Sbjct: 240 KFLTGADGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRYRPAGRAGAIGYLVGQP 299

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------------GGIL 349
           N     +  M     +     +V+        A+ YAR R                   +
Sbjct: 300 NHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKDAAAPQAPI 359

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYW 403
           +D P ++R +      +    AL    A   DEA++  + A          I+ PI K W
Sbjct: 360 VDHPDVRRMLLAQKAYVEGGLALILYCAKLVDEARAHDDAAVRADAARLLDILTPIAKSW 419

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKG 461
             +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L     +  
Sbjct: 420 PSQWCVAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLGRKVSQDD 479

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA--------LASS 513
                 L + +   +    + +   +R+              +T +++        LA++
Sbjct: 480 GASLRALDARIGATV-ERARALDAGMREQAEALARRWARLGDVTRQLSAIGDPQTRLANA 538

Query: 514 AAALYRAGMNDIADVFLENRFLDNCHS 540
           +  L   G   +A ++L+     + H 
Sbjct: 539 SVYLEAFGHLVVAWLWLDVTLAAHGHD 565


>gi|5107394|gb|AAD40109.1| ZmaE [Bacillus cereus]
          Length = 382

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 137/363 (37%), Gaps = 35/363 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHK 172
           G+  +   + +  +        R   +   A      L++  V+     +    T    +
Sbjct: 44  GVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESIKRWGTEEQKR 103

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P+             M K ++     LTE   G+D  A+ +  ++++D        K
Sbjct: 104 KWLPE-------------MAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDHFILNGHKK 150

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W   + ++D F++ A  EG+     V   + + S  G+   ++   + + S+   E+   
Sbjct: 151 WISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKLLASNSSHIAEIHLQ 205

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
           +        L    G    +     LD    S++   V++A+      + Y+RRR     
Sbjct: 206 DVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVAYSRRRKQGNK 264

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   ++  +A+ +++I AA +L           K R +    A I   I KY+  KM
Sbjct: 265 YICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRQTDAVIETTIAKYFASKM 318

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM----VLDVLNLLEKGTN 463
           A  V  +A++  GG+G+  E  + R +RE+    I+ G+   +        L    +   
Sbjct: 319 AMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVLQPIIAQHALRTCSQKGG 378

Query: 464 LFE 466
           L  
Sbjct: 379 LLR 381


>gi|328883616|emb|CCA56855.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 609

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/494 (16%), Positives = 168/494 (34%), Gaps = 76/494 (15%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P     +       +       +           
Sbjct: 46  RRLAENELAESFADADRNPPV---FDP---ETNTAPVPATFKKSYNAFMESEYWRLGIPE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                V  ++     A L L+    A  + S     A ++         K          
Sbjct: 100 EIGGTVSPRSLIWAYAEL-LLGSNPAIWMYSSGPAFAGILYNEGNEAQKK---------- 148

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                     +      + LTE   G+D+ A  ++  +  DG + + G K F++S   D 
Sbjct: 149 ----VAQIAVEKRWGSTMVLTEPDAGSDVGAGRTKATQQEDGSWHIEGVKRFITSGEHDM 204

Query: 243 -----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQRLKNKIGNRSNA 285
                  +LA+ EG   G   +   L             G+ NG+    +++K+G +++ 
Sbjct: 205 EENILHYVLARPEGAGPGTKGLSLFLVPKYEFDWETGELGARNGVYATNVEHKMGLKASN 264

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T E+ F +     G+L+GD +     +  +     +     ++S +      A+ YA+ R
Sbjct: 265 TCEMTFGDKHPAKGWLIGDKHDGIRQMFLIIEFARMMVGTKAISTLSTGYLNALEYAKER 324

Query: 343 HVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                             +   P ++R++           +L    A+  DE   +    
Sbjct: 325 VQGTDLANFMDKAAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDEIAIKEAAG 384

Query: 391 AYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             A+ +        PI K +  +     +A++++  GGSG+++E  I ++ R++  +++ 
Sbjct: 385 EDAKALHGLNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLY 444

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+      D               F  + +D G+S   +   ++  +++    + LA  
Sbjct: 445 EGTTAIQGQDF-------------FFRKIVRDQGASLNALSEEIKKFLAVGTGGEELAGA 491

Query: 504 LTEKIALASSAAAL 517
              + ALA +A  L
Sbjct: 492 ---RDALAKAAVDL 502


>gi|295840259|ref|ZP_06827192.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197698764|gb|EDY45697.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 409

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 129/394 (32%), Gaps = 43/394 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    +++ +   G++   +              +    L+       
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKLGIYSLDFYAQQFFDPTGLGIPLTMEELF-WGDAGI 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +  +A  V    T      W P+++    D                  +E   G
Sbjct: 86  GLSIVGTGLAAVGVLANGTEEQIGTWVPQMYGTPDD----------VKVAAFCSSEPDAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+A + ++       D         W  +  ++D  +++A V+  +G       +    
Sbjct: 136 SDVAGMRTRAVYDEAKDEWVLNGTKTWATNGGIADVHVVVAVVDPDLGSKGHASFIVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG------------------- 307
             GL   +   K G R++ T E+   +        L                        
Sbjct: 196 TKGLSQGQKFKKHGIRASHTAEVVLDDARVPGHCLLGGKEKLDQRLARARERARAEGGER 255

Query: 308 ---PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                             M+V   R +   A+ YAR R   G  +ID   +   +AD+  
Sbjct: 256 IKNAAMATFEASRPAVGAMAVGTARAAYEVALEYARTRTQFGRPIIDNQGIAFQLADMRT 315

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I AA  L +R +      K  +           ++K +  + A  V A+A++ +GG+GY
Sbjct: 316 RIDAARLLVWRASWMAATGKPFTSA------EGSMSKLFASETAKQVSAQAIQILGGNGY 369

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             E  + R +R+S   +I  G+     L +   L
Sbjct: 370 TREYPVERMHRDSAIYTIFEGTSEIQRLVIARTL 403


>gi|324998923|ref|ZP_08120035.1| long-chain-acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +  R    G+        +                  + A +  G L          +
Sbjct: 43  KEIFARLGELGIPGMQVPEEYGGGGATSFRFSAVLTEEVVRAGVHLGGLGVHMNVVLPYL 102

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P I   E             +   + +TE   G+D+A +T++ ++  
Sbjct: 103 LRYATEEQRRRWLPGIARGE-------------LMTAIAMTEPGTGSDLAGMTTRARRAG 149

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           D  + L G K F++  +  D  +++A+          +  L+ +    G    R  +K+G
Sbjct: 150 D-RFVLDGAKTFITGGINCDLVLVVARTGNSENRRQGLSLLVVEDGMPGFTRGRKLDKLG 208

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T EL F         LLG+   +   +        L  A+ +V+    +L   + 
Sbjct: 209 LHTQDTAELFFDGVEVPEDNLLGEEGQAFTYLTGNLPQERLAIALGAVAAAETALDTTVG 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R V G  L      +  +A  A ++ A  A+        D +    + A  +   A
Sbjct: 269 YVKEREVFGSSLAGFQNTRFELAACAAEVMAGRAM-------LDRSLVDHDRAELSAADA 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +C ++   V+   ++  GG GYI +  IAR Y ++  + I  G+   M   +   
Sbjct: 322 AALKLFCTELQGRVLDRCLQLFGGYGYIRDYPIARLYADARVSRIYGGTSEVMKTIIAKS 381

Query: 458 L 458
           L
Sbjct: 382 L 382


>gi|308272942|emb|CBX29546.1| Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           [uncultured Desulfobacterium sp.]
          Length = 554

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 80/466 (17%), Positives = 153/466 (32%), Gaps = 59/466 (12%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            +DK EF P        S   GL        +  +                  L      
Sbjct: 42  DFDKKEFFPEETIRELLSPEIGLQLLGIPEVYGGMGGGARDICYLTLEMSKICLGVTTAF 101

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 A  + +  T    K W                + K S  +   +TE   G+++A
Sbjct: 102 FALQLGADPLIVGGTEEQKKKWL-------------GAIAKDSSLVAYAVTEADAGSNLA 148

Query: 213 AITSQGQKISDGI----YCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           A+ ++   + D      Y ++G K F+ +   +D   +LA              + +   
Sbjct: 149 ALKTKADPVIDNGKITGYVINGTKQFISTGGYADFITLLANTPEGP-----AFFVVEKGT 203

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIM 323
            G    + + K G R++ T  L F + F  +   +      G  +  K+     +  A M
Sbjct: 204 KGFIQGKGEEKHGIRASNTSPLIFEDVFVPVENLIGGIPGHGLKQANKVFGYTRVMVAAM 263

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA-DIALDIAAATALSFRLANSFDE 382
           ++   +  L   I YA++R   G  L ++      +     +   AA A    +    D 
Sbjct: 264 ALGASQACLNILIPYAKQRIQFGTPLSEKQGYTHKLVVPNVVRTEAAAAYVDEVVVRLDS 323

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +         ++   I K +  + A     +A++ +GG GYI E  + +  R+     I
Sbjct: 324 GEED------LQVEGSIAKLFATESADKAADDAIQGLGGYGYIAEYEVEKIKRDVRITRI 377

Query: 443 LLGSGNAMVLDVLNLLEKGT-----NLFEQLFSTLEQ---DLGSSGKK----VITILRDS 490
             G+       +     K T       +  ++  +++    +  +G +        L D+
Sbjct: 378 YEGTSEIQQNIIGTFRWKKTWKTKGEFYLSIYKEMDKLSISIPDAGYRYYGLAAKALNDT 437

Query: 491 ISLCKEDKGLARF------LTEKIALASSAAALYRAGMNDIADVFL 530
           I+   E+K L R       L + +A     A+L R         F+
Sbjct: 438 INFVHENK-LTRQQHIMFLLADMMAYVEVGASLARKS------AFI 476


>gi|126731620|ref|ZP_01747425.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126707786|gb|EBA06847.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 412

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 134/369 (36%), Gaps = 32/369 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL        +  V     A+ + A  +  +       +   S      +
Sbjct: 70  REIMSEMGELGLLGPTLPEDYGCVGANYVAYGLIAREVERVDSGYRSAMSVQSSLVMHPI 129

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + PK+ S E+                 GLTE   G+D  ++ ++  K+ 
Sbjct: 130 FAYGTEEQRQKYLPKLASGEF-------------VGCFGLTEPDHGSDPGSMITRAVKVD 176

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D FI+ A+ E   G   +   + D   +GL   +++ K   R
Sbjct: 177 GGYRLSGAKNWISNSPIADVFIVWAKSEAHGGK--IKGFVLDKGADGLAAPKIEGKFSLR 234

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           ++ T  +     F      L  + G          L+ A   +    +  AEA  +A R 
Sbjct: 235 ASITGMIMMDEVFVPEENLLPHAEGLAGPFG---CLNRARYGIGWGAMGAAEACWHAART 291

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    ++++ +AD+  +I+     + RL    D  ++ +E       + 
Sbjct: 292 YTMDRKQFGKPLAATQLIQKKLADMQTEISLGLLAALRLGRMMDAHENSAE-------LI 344

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A A+  EA +  GG+G  +E  + +H     A +   G+ +   L +   
Sbjct: 345 SLVKRNNCGKALAIAREARDMHGGNGVSDEYGVIQHVMNLEAVNTYEGTHDVHALILGRG 404

Query: 458 LEKGTNLFE 466
           +  G   F+
Sbjct: 405 IT-GLQAFQ 412


>gi|87121780|ref|ZP_01077667.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121]
 gi|86163031|gb|EAQ64309.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121]
          Length = 607

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 87/461 (18%), Positives = 175/461 (37%), Gaps = 68/461 (14%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS- 153
           +KV   P   A        G   + +D         +   +RAA  Y+ A   +  +   
Sbjct: 71  EKVHLIPETQAAWDAYAEAGFLGAAYDFEEGGSQMPEI-ILRAAMGYITAANPSTTVYPF 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            ++ +A++V    +      + P             PM     A  + LTE   G+ +A 
Sbjct: 130 LTLGAANLVRSFASEEHKATYLP-------------PMMDGRFAGTMALTEPGQGSALAD 176

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLL 262
           IT+  +  +DG Y + G K F++            ++LA+VE        +  F+ P++L
Sbjct: 177 ITTSAKPQTDGTYRIFGQKMFITGGDQSLTDNIIHMVLARVEDAPAGTKGISMFICPKVL 236

Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKI 314
            +     G  N +    L +K+G ++  +  L F       G+L+G+ N     +  +  
Sbjct: 237 VNEDGSLGERNDVALAGLLHKMGYKNATSTVLNFGEKDGAVGYLVGEENKGLSYMFQLMN 296

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIA 363
              +     +          ++ YAR R                 +++   ++R +    
Sbjct: 297 EARISVGSGASLLGYQGYNYSLEYARNRPQGRPPTDRDPSSKQVNIVEHADVRRMLLAQK 356

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAME 417
                + AL    ++ F+++++ + E           ++ PI K +  K        A++
Sbjct: 357 AYSEGSLALCLYASSLFEDSQTGATEEDRKAAFTLLDLITPIVKSFPSKYGLKANELAIQ 416

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475
            +GGSGYI E  + ++YR++  N+I  G+     LD+L   +  K    ++ +   +   
Sbjct: 417 ILGGSGYIREYPVEQYYRDNRLNAIHEGTDGIHGLDLLARKVPMKDMAGYQAMSKEM--- 473

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516
                KK++  ++  ++L    +G  R      A A  AA 
Sbjct: 474 -----KKILKTIKQDVNL---QEGRIREF----ADALQAAL 502


>gi|302188044|ref|ZP_07264717.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642]
          Length = 413

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 132/384 (34%), Gaps = 32/384 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     ++ +  P    +L      GL        +     +                  
Sbjct: 47  PHAHEMERSKTFPT--EMLAAMKEMGLFGLSIPEEYGGFQLRLPVFAVVMETIAAGWTTL 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++   T A  +A   +    + + P + + E                 L LTE   G
Sbjct: 105 AAYINSHCTVAYAIAKYGSEEQKQAYLPLMATGEQRG-------------ALLLTEPGAG 151

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           +D+ +I +      DG        +  +   +   + LA+   +           L D +
Sbjct: 152 SDLQSIRTIATPTEDGFSISGSKIFVTNGAKATILLTLARTSFDEGTNKPRSSLFLLDKT 211

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSV 325
             G+      +K+      T+E+            L  +TG  + M+ +L  L+   +++
Sbjct: 212 QEGVSVTSEFHKMAYGLVDTMEIVLDKVVASKTAVLGGATG--KGMRHLLDALEVGRIAI 269

Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   V LA     EA  YA  R   G  +     ++  +A++A  + AA  ++   A + 
Sbjct: 270 AASAVGLAANALSEAKRYASDRKSFGVAIDQHQAVQLRLAEMATKLVAARLMTAEAARAK 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  +        A +++ + K    + A  +  +A+   GG GYI+E  + R YRE+P  
Sbjct: 330 ESGE-------RADMLSGMAKLLASESARDITEDALRIHGGYGYIDEFVVERLYREAPLY 382

Query: 441 SILLGSGNAMVLDVLNLLEKGTNL 464
            +  G+ +   L +   L   +  
Sbjct: 383 IVGEGTNDIQKLVIARRLIDESEA 406


>gi|116751106|ref|YP_847793.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116700170|gb|ABK19358.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 383

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 135/360 (37%), Gaps = 32/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G+   I    +E V     +  R   L  + ++ A   M+  V   +  AL
Sbjct: 42  ELMPFMAQIGITGIITPTQYEGVGL--GYVARTIVLEELGRVCAAVPMAMQVHHMACAAL 99

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                    K + P++              +      + +TE  GG+D+A   +      
Sbjct: 100 ADFGNETQKKKYLPRL-------------ARGDTMGCVAVTEPGGGSDVAGTKTTADLKG 146

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F+++   SD ++++A+     G   +   + D +  G    R +NK G 
Sbjct: 147 D-KYIINGRKCFITNTHTSDFWVVIART--GEGAKGLSAFVVDKNAPGARVGREENKFGM 203

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIH 337
           R   T EL F++        L     G    MK +        A +++  +  +  EA  
Sbjct: 204 RGANTGELVFNDCEVPRENLLGQEGGGVGVAMKTVSETGRTGMAAVALGILTCAYEEAAK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           +A+ R + G  +     ++  +A+I   +  A  L +R +   D       E+A A+   
Sbjct: 264 FAQERVLYGKPIATLQAIQFYMAEIFAQLEIARLLCYRASWMKDNNLRFDTESALAKW-- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                + C+ A      A+E  G  G ++E ++ R  R++       G+G    L +   
Sbjct: 322 -----YTCEAAATAAKRAVEIHGSYGIMKEYTVQRLLRDAMVTIPAGGTGEIGKLVLGRA 376


>gi|54293780|ref|YP_126195.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens]
 gi|53753612|emb|CAH15070.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens]
          Length = 567

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 108/455 (23%), Positives = 187/455 (41%), Gaps = 39/455 (8%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
            +  +   +  ++ F   V +ELE         T  E    AN   P++  Y   G+R D
Sbjct: 39  HFPDEPDFIQQLSQFSKAVAEELEP--------TVMENNLDANL--PKIEQYNAIGQRDD 88

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V  HPA+           L         + +++    K   +   L +         P 
Sbjct: 89  RVIHHPAYVRAGDIIYGSNL--------MQYLLKPGQMKKTLSLFLLSSHAGEAGHNCPI 140

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             SA ++      RV   ++    +  Y      P    +      LTE +GG+D+ A  
Sbjct: 141 ACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFTGAQFLTEIQGGSDVGANA 194

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNG 269
           ++        + +SG KWF S+  +D  +M A+ +        +G FLVP  L+DGSPN 
Sbjct: 195 TRANLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTKGLGLFLVPSRLDDGSPNH 254

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSGM 328
              +RLK KIG R+ AT E++F     + +GD+       +E++  L  + ++   +   
Sbjct: 255 YYLRRLKQKIGTRTMATAEIDFEGALAYPMGDVAEGIHLVMENVLHLSRIFNSFSVLGMS 314

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A +YA+ R      +I+ P++K ++A I  +  A  A  F +A   DE  +  E
Sbjct: 315 RRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLAMLASVFHMARCQDELDALPE 374

Query: 389 ------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-SIARHYRESPANS 441
                 +    R +A I KY+  K +   I   ++ + G+G IE   S+ R  R+     
Sbjct: 375 PQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGNGTIENFSSLPRLLRDCIVCE 434

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
              G+   + +  L  + K   + E   + L Q L
Sbjct: 435 NWEGTHFTLWMQTLRDMHK-FAIDELFIAHLRQLL 468


>gi|301064561|ref|ZP_07204957.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300441309|gb|EFK05678.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 377

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 139/373 (37%), Gaps = 24/373 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +  D+    P    + ++    G+    +                     +  +  A
Sbjct: 24  PRAKEIDESGEFP--REMFQKMAGMGIFGLRYPADRGGSGG------NTTLFCITVEELA 75

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             LMS +  +A M +LM T     ++     + E       P  K        LTE   G
Sbjct: 76  RGLMSLAAITA-MQSLMGT-----NFLFHFGTDELREKYFLPAMKGEKVACFCLTEPEAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  +++  QK   G        W  + P++D + +L Q + +     +          
Sbjct: 130 SDLGNVSTLAQKTDSGYRLNGMKTWVTNGPVADFYTVLMQTDPKKKFRGLNFFFVPRGTP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSV 325
           G    +  + +G R+    E+ F +        L      + ++  +   I   +A +++
Sbjct: 190 GFSNSKAFDLLGTRTTPISEIAFKDCLVPHHHMLGAEGRGLSNLLSILAEIRTMTAALAI 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R ++ ++I YAR R   G  +    +++  +A++A+D+ A+  ++++  +  DE K 
Sbjct: 250 GLQRAAMNDSIQYARERVQFGQTISKYQLIQAKVANMAVDLEASRLMTYKATHMIDEKKE 309

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E++ A       KY+  + A      A   +G   Y  E +  R+YR++       G
Sbjct: 310 ALTESSMA-------KYFATEAACRAADHATRILGAYAYSMEYAAQRYYRDNRFLLYGGG 362

Query: 446 SGNAMVLDVLNLL 458
           S   +  ++   +
Sbjct: 363 SHEILQTNIAKWV 375


>gi|254393359|ref|ZP_05008505.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326439930|ref|ZP_08214664.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|197706992|gb|EDY52804.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 410

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 129/396 (32%), Gaps = 46/396 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPVIQEAAKAGIYSLDFYAQQFFDPTGLGIPL--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++        +    K         +E   
Sbjct: 85  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG-------EPGDVK---VAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+ A+ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 135 GSDVGAMRTRAVYREATDEWVIDGTKTWATNGGIAQVHVVVAVVDPELGVKGHASFVVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP----------------V 309
              GL   +   K G R++ T E+            L                       
Sbjct: 195 GTPGLSQGQKFRKHGIRASHTAEVVLDGVRVPGHCLLGGKEKLDERLARARAARASGTSG 254

Query: 310 EDMKILIYLD-------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           E ++                M+V   R +   A+ YAR R   G  ++D   +   +AD+
Sbjct: 255 ERVRNAAMATFEASRHVVGAMAVGTARAAYETALDYARTRTQFGRPIVDNQGVAFQLADM 314

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L +R +      K  +           ++K +  + A  V A A++ +GG+
Sbjct: 315 RTRIDAARLLVWRASWMAATGKPFTAA------EGSMSKLYASETAKDVTARAIQILGGN 368

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  E  + R +R++   +I  G+     L +   L
Sbjct: 369 GYTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 404


>gi|76801952|ref|YP_326960.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
 gi|76557817|emb|CAI49401.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
          Length = 387

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 126/359 (35%), Gaps = 29/359 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G +    +    P V + A+ +    L                     +  
Sbjct: 46  ELIPKMGELGFYAPNLEGYGSPNVSETAYGLLMQELEAGDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W PK+   E                  GLTE   G++ +A+ +  +   DG
Sbjct: 106 YGSEAQKEEWLPKLGQGE-------------AVGCFGLTEPEHGSNPSAMETHAEADGDG 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP+SD  ++ A+ +       V   L +   +G+   ++ +K+  R++
Sbjct: 153 YVLNGAKTWITNSPISDVAVVWAR-DRSADDTPVRGFLVETDRDGVTTNKITDKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
            T E+  ++ +     + NV  G       L  L  A   ++   V  A     EA  YA
Sbjct: 212 ITGEIGLNDVYVP---EENVLPGVSGMKGPLSCLTQARYGIAWGAVGAARDAFEEARQYA 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   GG +    + +  +A++A  I  A  L++RLA   +                 +
Sbjct: 269 TDRDQFGGPIGRFQLQQDKLAEMATQITLAQLLAYRLAELKERGD-------MRPQHVSM 321

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +K    +MA      A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 322 SKRNNVRMARNQARIAREMLGGNGITTDYSPMRHMANLETVYTYEGTHDIHTLILGEDL 380


>gi|319764366|ref|YP_004128303.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118927|gb|ADV01416.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 399

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 139/409 (33%), Gaps = 46/409 (11%)

Query: 71  QELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            E   + + +           +      D+ +   A  AL+     DG     W R    
Sbjct: 13  LEWPFLDDGHRRLAMELDAWCQDHLPHIDETDLRAACRALVSALGQDG-----WLRYCVV 67

Query: 127 VVRKQAHKIRAARL-----------YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
              K     +AA L                  A    +     +  ++L  +      + 
Sbjct: 68  AGDKGQFGGQAAELDSRSLCIIRETLARHHALADFAFAMQGLGSGTISLAGSDAQKAAYL 127

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P              + + +      L+E   G+D+AA++ + +   DG        W  
Sbjct: 128 P-------------AVARGTKIGAFALSEPDAGSDVAALSCRAEADGDGYVLNGSKTWIS 174

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++D + + A+ +   G   +   + D    GL      + I     A+  L F N  
Sbjct: 175 NGGLADFYCVFARTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLAS--LHFENCR 232

Query: 296 GFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G    M+ L       A  ++   R ++ E + +A RR + G  L D 
Sbjct: 233 VPRSCMLGPPDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQTLADF 292

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            + + A  D+A  I  +  L++R A   D + ++ + E A A++ A        + A  V
Sbjct: 293 QLTQAAFGDMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TESAQQV 345

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I  A++  GG G      + R YR+  +  I  G+     L +   + +
Sbjct: 346 IDRALQMFGGKGVTVGNPLERLYRDIRSLRIYEGATEVQKLIISREVLR 394


>gi|255078674|ref|XP_002502917.1| predicted protein [Micromonas sp. RCC299]
 gi|226518183|gb|ACO64175.1| predicted protein [Micromonas sp. RCC299]
          Length = 434

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 135/390 (34%), Gaps = 21/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +       I  G+  S W       +  +  K            
Sbjct: 51  PHTHEWDEKKSLPLELYRKTYEAGILPGVVGSPWAGGMGAHLDVKGPKD-------FDYF 103

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLT 203
               ++       S   L           P +    S +        + +    I L +T
Sbjct: 104 HELIILDEFGRCGSGGVLWGLLEGVHIGLPPVLNFGSEDLRERCGLRVLRGEATICLCIT 163

Query: 204 EKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+A I    +K + G  Y + G K ++++ +   +  +A   G  G   +  LL
Sbjct: 164 EPYAGSDVANIRCTAKKSNCGNFYVVDGEKKWITNGVWADYFTVAVRTGGSGMGGISLLL 223

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLD 319
            + +  G+  +R+ + +G  ++ T  + F N     G L+G  N     +          
Sbjct: 224 IEKTMPGVQCRRM-DCMGVWASGTSFITFENVKVPVGNLIGAENNGFKYIMHNFNHERWG 282

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + +    RV   EA  YA RR   G  L++ PV++  +AD+   I A       +   
Sbjct: 283 FVVQANRFARVCYEEAFKYAHRRRTFGKRLVEHPVIRAKLADMVRQIDATHHQMENITYQ 342

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRE 436
                      A A I   + K    K+      EA +  GG+ Y+       + R YR+
Sbjct: 343 MCTMPKEQSAKALAGI-TALAKVQSTKVFEYCAREAAQIFGGASYVRGGQGEKVERLYRD 401

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             A +I  GS   M+   +    K  +  +
Sbjct: 402 VRAYAIPGGSEEIMMDLGVRQAMKEWDAVQ 431


>gi|229182035|ref|ZP_04309331.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W]
 gi|228601450|gb|EEK58975.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W]
          Length = 347

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 137/351 (39%), Gaps = 31/351 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVAL 164
           +++     G+  +   + +  +        R   +   A      L++  V+     +  
Sbjct: 1   MIQEISSYGVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESIKR 60

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PK             M K ++     LTE   G+D  A+ +  ++++D 
Sbjct: 61  WGTEEQKRKWLPK-------------MAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH 107

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW   + ++D F++ A  EG+     V   + + S  G+   ++   + + S+
Sbjct: 108 FILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKLLASNSS 162

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
              E+   +        L    G    +     LD    S++   V++A+      + Y+
Sbjct: 163 HIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVAYS 221

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           RRR      + +   ++  +A+ +++I AA +L           K R +    A I   I
Sbjct: 222 RRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDAVIETTI 275

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 276 AKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|86130775|ref|ZP_01049374.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
 gi|85818186|gb|EAQ39346.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134]
          Length = 392

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 76/362 (20%), Positives = 135/362 (37%), Gaps = 35/362 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +    +
Sbjct: 57  GLAEIGAFGPYIPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIWKYGS 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + PK+ S E+                 GLTE   G++ + + +  + + D    
Sbjct: 117 EEQRNKFLPKLASGEFMG-------------SFGLTEPDHGSNPSGMVTNFKDMGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                W  +SP  D  ++ A+  EGR+   +V R +E     G       NK   R++AT
Sbjct: 164 NGAKLWISNSPFCDVAVVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            EL F +        L   +G    +  L       A  ++         A+ YA+ R  
Sbjct: 219 GELIFQDVKVPKENLLPNKSGLGAPLGCLDSARFGIAWGAIGAAMDCYDTALRYAKERIQ 278

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    + ++ +A++  +I  A  L+FRL    +E ++ S + + A+          
Sbjct: 279 FGKPIAAFQLQQKKLAEMITEITKAQLLAFRLGQLKNEDRATSAQISMAKR-------NN 331

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            +MA  +  EA + +GG G   E SI RH     +     G+ +  +L +  L   G N 
Sbjct: 332 VEMAIKIAREARQMLGGMGITGEYSIMRHMMNLESVITYEGTHDIHLL-ITGLDITGENA 390

Query: 465 FE 466
           F+
Sbjct: 391 FK 392


>gi|187919804|ref|YP_001888835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718242|gb|ACD19465.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 380

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 129/368 (35%), Gaps = 32/368 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+         L  R    GL        +  +    +   +      +        +  
Sbjct: 34  DRFIPKEKMRELTERIADFGLPGCTIPAEYGGMG--WSFTTQGMLFEELVACSCDIALCV 91

Query: 155 SVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +       L    P V + + P + +               +   +G++E   G+++A 
Sbjct: 92  MLNMGLAAMLTNARPEVRERYMPGVLAG-------------KIFGSIGISEPDVGSNVAE 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++  +  D         W  +   SD  I   +     G   +  +L D   +G    
Sbjct: 139 LRTRAVRDGDHFIVNGEKTWITNGVYSDVLICTVR-----GEKGLSHILIDRKEHGYE-S 192

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           R  +KI   S +T ++  ++        +     G    MK+          +SV  MR 
Sbjct: 193 RNIDKIALGSQSTAQIFITDARVPATNVIGEEGEGLRNTMKVFEHARAHVGTLSVGIMRA 252

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L E+I YA+ R   G ++    ++   +A++A+ + A+  +  R+    D       +A
Sbjct: 253 ALEESIAYAKERKQFGKVIAAHQLIAAKLANMAIMVDASRLMCQRVFGLIDAGVRCDMQA 312

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +  + A  V  +A++  GG+G  +E ++ R  RE+    I  G+    
Sbjct: 313 SMA-------KAFATEAAVKVCRDAVQLHGGNGITKEFNVERLLREAIIIPIPDGTTEIQ 365

Query: 451 VLDVLNLL 458
            L +   L
Sbjct: 366 QLIISRAL 373


>gi|302912925|ref|XP_003050806.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI
           77-13-4]
 gi|256731744|gb|EEU45093.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI
           77-13-4]
          Length = 636

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 121/577 (20%), Positives = 212/577 (36%), Gaps = 88/577 (15%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
              +PP+    N +  D+         L  +    V  E+  L + VLS         A 
Sbjct: 10  FFQKPPVLQ--NQFHDDATYQRCFKLFLPQHIVRQVEAEVATLADEVLSDQVFAWITDAE 67

Query: 79  YNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N P L        G+    +     W  L    +  G   + +D  + P  R      +
Sbjct: 68  LNKPYLKGSGRDVFGQWKGDLVTGEGWRGLQNFGLSHGFVAAGYDTPYGPFSR----AYQ 123

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFS--REYDPTNKAPM 191
             RL L     A      ++   +   L T   TP +                    +  
Sbjct: 124 FLRLQLWTASCANVTCPSAMQDGAARLLQTHLRTPELRAKLTEDQTKVLENAFSHLTSRD 183

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQG--------------QKISDGIYCLSGHKWFLSS 237
              +   G  +TE+ GG+D++   +                + I  G + ++G KWF S+
Sbjct: 184 PAYAWTSGQWMTERTGGSDVSLTETTAIYEPTPEAKLASKIENIPLGPWSINGFKWFSSA 243

Query: 238 PMSDAFIMLAQV-EGRVGCFLVP-------------RLLEDGSP-NGLCYQRLKNKIGNR 282
             S   ++LA+  +G +  FL P             R +E+G   NG+  QRLKNK G +
Sbjct: 244 TDSRMTVLLARTAKGGLSTFLAPMRKHDPQATTSTGRPVENGEALNGVRIQRLKNKSGTQ 303

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           S  T EL   +  G+L+G        +  +  L  + S++ ++S +   L  A  YAR R
Sbjct: 304 SLPTAELVLEDMRGWLIGQEGRGIHEISTVLTLTRVHSSVAAMSYVGRGLGIARAYARVR 363

Query: 343 HVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLANSF-------DEAKSRSEEA 390
            +  G      LI+  +  R +A +  +      L+   A+         D     +  A
Sbjct: 364 EIGAGKGARMKLIESSLHMRTLAKMTSEYRGLMLLTMLTAHVLGVSEHPVDANLPPALAA 423

Query: 391 ---------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI----EER-SIARHYRE 436
                       R++  +TK + CK +  ++   ME +GG GY+    +E  ++AR +R+
Sbjct: 424 LTPSAKDAPPLIRVLTQLTKAYVCKASVQLLFSCMESLGGVGYLLNEEQEYLNVARLHRD 483

Query: 437 SPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLE----------QDLGSSGKKV 483
                I  G+ + +  D L  L+    G +  + L + ++          + +G +    
Sbjct: 484 CAVLPIWEGTTDVLSTDFLRALKHPKGGRDALDALEAFIKNGFDFQAKTPKPVGWNPLNA 543

Query: 484 ITILRDSI--SLCKEDKGLARFLTEKIALASSAAALY 518
              LR+ I   L K+  G AR +   +A    +  LY
Sbjct: 544 WRDLRNLIERELLKDLMGDAREVLWAVADLLVSVLLY 580


>gi|297560091|ref|YP_003679065.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844539|gb|ADH66559.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 391

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 99/287 (34%), Gaps = 21/287 (7%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
           E       P           +TE   G+D  AI ++  +  D  + ++G K F++    +
Sbjct: 110 EQKERYLLPTIAGERRSCFAITEPGAGSDAKAIRTRAVRDGD-TWVVNGEKTFITGGNEA 168

Query: 241 DAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           D  ++ A  +   G    V   L D    G   + + + +G R  A+  L F +      
Sbjct: 169 DFAMVFAVTDPDRGADGGVTCFLVDREA-GWTSEPI-DTMGERRPAS--LVFQDVRVPHE 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L       E    + ++          ++ G    L  AI Y+R R   G  + D+  
Sbjct: 225 NILGEEGRGFE--LAMKWIGKGRYLLPARALGGCERLLDMAIEYSRTRETFGAPIADRQA 282

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD   +I A   L    A      +              I K +    A  ++  
Sbjct: 283 IQWMIADSQTEIEALRLLVLHAAWQVSVGRDSRHAQ-------SIAKLFGGVKANEIVDR 335

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            M+  GG GY  E  I R YR+     I  G+       +   L KG
Sbjct: 336 VMQIHGGMGYTRELPIERFYRDVRLLRIFEGTDEIQRRTIARDLLKG 382


>gi|326921769|ref|XP_003207128.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Meleagris
           gallopavo]
          Length = 440

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 129/355 (36%), Gaps = 24/355 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    PA H + +     G         +  +    ++ I  A      
Sbjct: 106 KEINPFVDKWEEEGQFPA-HKVFKTLGQAGFLGVDKPTEYGGMGLDFSYSIAVAE----- 159

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             E G +    +  A  V A M TP +      +  S E       P     +   LG++
Sbjct: 160 --ELGSIRCGGIPMAIGVQAGMATPAL-----TRFGSDELKKQFLTPTISGDLVACLGIS 212

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+I +   +  D      G  W  S   +D   +LA             +  
Sbjct: 213 EAGAGSDVASIKTAAVRKGDEYIINGGKMWTTSGCQADWMCLLANTSEGHPHRNKSLICL 272

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
             +  G+   +  +K+G RS+ T ++ F +       L+G+  +             L  
Sbjct: 273 PMNLPGIHITKKIDKLGMRSSDTAQIFFEDVRVPSKNLIGEEGMGFTYQMLQFQEERLWG 332

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               ++ +   + E I Y R+R V G  ++    +   +A++A ++    +L +R    +
Sbjct: 333 VATVLTPLETIIQETIDYTRQRKVFGQSVLQNQAVHFRLAELATEVELLRSLLYRTIALY 392

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            E    ++        A + K    ++A  V    ++  GG G+  E  ++R YR
Sbjct: 393 VEGNDVTK-------FASMAKLKAGRLAREVTDSCLQFWGGMGFTSEVLVSRFYR 440


>gi|300904546|ref|ZP_07122385.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           84-1]
 gi|300403540|gb|EFJ87078.1| putative crotonobetainyl-CoA dehydrogenase [Escherichia coli MS
           84-1]
          Length = 374

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 134/353 (37%), Gaps = 28/353 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +R    +G+        F  +     +  +   L  +++  A   +  +      + 
Sbjct: 41  REFMRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMR 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +             T ++ ++    A  L LTE   G+D  + T+   +  +
Sbjct: 99  RFGSAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-N 145

Query: 224 GIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G   ++G K F++      + ++LA+  + +           D S  G+    L +KIG 
Sbjct: 146 GKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGW 204

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHY 338
              +T E+   N        +     G +  M    +  L +A  S      +  +A  Y
Sbjct: 205 HMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A     
Sbjct: 265 ANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             K +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+
Sbjct: 320 --KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMI 370


>gi|311103807|ref|YP_003976660.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310758496|gb|ADP13945.1| acyl-CoA dehydrogenase FadE25 1 [Achromobacter xylosoxidans A8]
          Length = 389

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 26/318 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++LM +  + + + P++   E                   L+E   
Sbjct: 94  ADFAFAMQGLGSGAISLMGSDELRQRYLPRVARGE-------------AIAAFALSEPDA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+  + +   D         W  +  ++D + + A+     G   +   + D   
Sbjct: 141 GSDVAAMACEAKLDGDHYVLNGAKTWISNGGIADFYCVFARTGEAPGARGISAFVVDADT 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G         I     AT  + F N    +   L     G    M  L       A  +
Sbjct: 201 PGFEVSERIELIAPHPLAT--ITFDNCRIPVSHRLGDAGQGFKLAMMTLDIFRASVAAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E +  ++ R + G  L D  + + A+ D+A  I A+  L++R A   D  K
Sbjct: 259 LGFARRALDEGLARSKSRRMFGQTLSDLQLTQAALGDMATAIDASALLTYRAAWMRDVLK 318

Query: 385 SR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            R + EAA A++ A        + A  VI  A++  GG+G +    + + YRE  A  I 
Sbjct: 319 QRTTREAAMAKMTA-------TESAQTVIDRALQMFGGAGVVSGMPVEKLYREIRALRIY 371

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+     L +   L K 
Sbjct: 372 EGATEVQKLIIARELLKA 389


>gi|262204233|ref|YP_003275441.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087580|gb|ACY23548.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 394

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 118/366 (32%), Gaps = 25/366 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL     +          A+ +    L  +       +      S   + 
Sbjct: 51  RDLATELGELGLFGMHLEGYGCAGTSATAYGLACLELEAVDSGLRSFVSVQGSLSMFAIR 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P+             M         GLTE   G++ A + +  ++  D
Sbjct: 111 AFGSDEQREEWLPR-------------MAAGQAIGCFGLTEPDFGSNPAGMRTSAKRDGD 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +   G   +   +      G     +++K+  R+
Sbjct: 158 DWVLNGTKMWITNGSVADVAVVWARTDLDEGARGIRGFVVPTDTPGFRGIEIEHKMSLRA 217

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL   +       +L  +    GP+  +           +V   R  L  A+ YA 
Sbjct: 218 SVTAELVLEDVRLPASAMLPGVEGLKGPLSCL-NEARFGIVFGAVGAARDCLEAAVAYAT 276

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R V    L    + +  +AD+AL++  A  L+  L    D    R E+         + 
Sbjct: 277 DREVFDKSLAGYQITQVKLADMALEVGKAQLLALHLGRRKDAGGIRPEQ-------ISLG 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    + A A+  E    +G +G   E  + RH     +     G+     L +   L  
Sbjct: 330 KLNNVREAIAIARECRTILGANGITLEYPVIRHANNLESVLTYEGTSEMHQLMIGKALT- 388

Query: 461 GTNLFE 466
           G + F 
Sbjct: 389 GKDAFR 394


>gi|111221793|ref|YP_712587.1| acyl-CoA dehydrogenase, long-chain specific (LCAD) [Frankia alni
           ACN14a]
 gi|111149325|emb|CAJ61011.1| Acyl-CoA dehydrogenase, long-chain specific (LCAD) [Frankia alni
           ACN14a]
          Length = 384

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 119/360 (33%), Gaps = 26/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A   ++   GL        F         +         +A +    L   +   A  +
Sbjct: 40  RAAWTKAGEMGLLGLRVPEEFGGAGMTDPRYDAVITEELALAGVSGLALQLHNELLAPYM 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +T       W P   S E             +   + ++E   G+D+  + +   +  
Sbjct: 100 LDLTNDEQKARWLPGYASGE-------------IITAVAMSEPGAGSDLRGMRTTAIRDG 146

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D    L+G K F+S+  +SD  ++  + + +     +  +  +    G    R  +K+G 
Sbjct: 147 DHF-VLNGAKTFISNGLISDLVVVAVKTQPQEQPTKLSLIAVERGTPGFERGRKLDKVGA 205

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILI--YLDSAIMSVSGMRVSLAEAIHY 338
            S  T EL FS+        +      +   M+ L    L  AI SV+  R +      Y
Sbjct: 206 HSQDTSELFFSDARVPAANLIGEEFRGMNYLMRNLASERLSIAISSVASARRAQQLTAEY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  +      +  +A +     A  +         D       +       A 
Sbjct: 266 VRSRKAFGTTIGSFQNTRFVLAALHARTQAVQSFV-------DTCLRGKVDGDLTIEEAA 318

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    ++    +   ++  GG G++EE  IAR YR+   + IL GS   M   +   L
Sbjct: 319 AAKLLATELEFDAVDAGVQLHGGYGWMEEYPIARMYRDVRISRILGGSSEIMKEVIGRSL 378


>gi|226941807|ref|YP_002796881.1| glutaryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9]
 gi|226716734|gb|ACO75872.1| Probable glutaryl-CoA dehydrogenase [Laribacter hongkongensis
           HLHK9]
          Length = 396

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 139/394 (35%), Gaps = 46/394 (11%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R ++ +       ++R     GL     +      V   A+ + A  +
Sbjct: 39  QARLAPRAREAFRHEQFD-----RDIMREMGEQGLLGCTLNDWGCAGVSHVAYGLVAREV 93

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S      +A   +P     W P +   E             +    
Sbjct: 94  ERVDSGYRSAMSVQSSLVMYPIATYGSPEQQARWLPGLARGE-------------LVGCF 140

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259
           GLTE   G+D  ++ S+ +K+  G        W  +SP++D  ++ A+ + G +  F++ 
Sbjct: 141 GLTEPDAGSDPGSMHSRARKVDGGYLLSGSKMWITNSPIADVLLVWARDDAGDIRGFVLE 200

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
           R        GL   +++ K   R++ T E+            L  +    GP        
Sbjct: 201 R-----GMAGLSTPKIEGKFSLRASVTGEIVMDGVMVPDSHCLPGVRGLKGP------FS 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRH-----VSGGILIDQPVMKRAIADIALDIAAATA 371
            L+ A   ++   +  AE+  +  R++       G  L    +++  +A++  +IA    
Sbjct: 250 CLNKARYGIALGALGAAESCWHTARQYVLDRLQFGRPLAANQLVQWKLAEMQTEIALGLQ 309

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            + ++    D   +       A  M  + K   C  A  +   A + +GG+G  +E  + 
Sbjct: 310 AALQVGRLMDAGTA-------APEMVSLIKRNNCGKALGIARMARDMLGGNGISDEFGVI 362

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           RH     A +   G+ +   L +L   + G   F
Sbjct: 363 RHVLNLEAVNTYEGTHDIHAL-ILGRAQTGIQAF 395


>gi|260219462|emb|CBA26307.1| hypothetical protein Csp_E33950 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 629

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 98/565 (17%), Positives = 195/565 (34%), Gaps = 90/565 (15%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTP--QLHAYGPGGERW 94
           + D LL   +        +                  R+A     P  +L          
Sbjct: 25  TLDFLLHDWLDTTGLTSRERFADHNRETFDAVLDTCERIAREKYAPFNRLVDTQEPHFDG 84

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +KV    A H   +     G+  +  D     +    + +  A   +  A +  G  +  
Sbjct: 85  EKVTLPQATHDAFKAYAESGMLSAAQDYDIGGMQLPYSVEAAANAFFACASVSIGSSL-L 143

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           SV +A+++    T    + +A K FS ++  T             + L+E + G+ ++ +
Sbjct: 144 SVGNANLLMAHGTELQKQVFAHKEFSGQWSGT-------------MCLSEPQAGSSLSDV 190

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQV----------EG 251
            ++     +G         Y L G+K ++SS   +       ++LA++            
Sbjct: 191 ATRAVPDGEGFESDPLGARYRLRGNKMWISSGEHELTENIVHLVLAKIPNADGKLVPGTR 250

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
            +  F+VP+ + +      G  N +    L +K+G R      L F              
Sbjct: 251 GISLFIVPKKMVNAQGELTGVRNDVALAGLNHKLGWRGTTNTLLNFGEGKFPLDGQAGAV 310

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------ 349
           G+L+G        +  M     +   I +          ++ YA+ R   G  +      
Sbjct: 311 GYLVGQPGKGLACMFHMMNEARIGVGIAATMLGMAGYYASLDYAKNRPQ-GRPITGAGKD 369

Query: 350 --------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIM 396
                   I+   +KR +         A AL    A   DE  + + + A        ++
Sbjct: 370 AAAPQTRIIEHADVKRMLLTQKAYCEGALALELYCARLIDEQHTGTAQDAEEARLLLEVL 429

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  +  + +++R++  N I  G+     +D+L 
Sbjct: 430 TPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLG 489

Query: 457 ---LLEKGTNLF---EQLFSTLEQ-----DLGSSGKKVITILRDSISLCKEDKGLARFLT 505
              L+E+G  L     ++ +T+ +      L    K +   L+D +    +         
Sbjct: 490 RKVLMEEGKGLTLLSHRIMATVNRCNGIPSLAPHAKALARALQD-VGFATQKAWSTGVPG 548

Query: 506 EKIALASSAAALYRAGMNDIADVFL 530
           E  ALA++   +   G   +A ++L
Sbjct: 549 E--ALANAVPYMQAFGHTVLAWIWL 571


>gi|284993184|ref|YP_003411739.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284066430|gb|ADB77368.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 614

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 96/501 (19%), Positives = 190/501 (37%), Gaps = 84/501 (16%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG-LH 116
           L  +        A   A  A+ N P    + P     + V    ++   +R +I DG   
Sbjct: 42  LAEVRRLAEGPIAASFA-DADRNPPV---FDPA---TNSVTLPESFKGSVR-AIEDGEWF 93

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                          A    AA   ++    A  +       A+++  + TP   +    
Sbjct: 94  SLDLPEHLGGFGAPHA-LTWAAFEMVLGANPAVFMYGSWAAFAAILDELGTPDQKR--LA 150

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           ++            M +      + LTE   G+D+ A  ++  +  DG + L+G K F++
Sbjct: 151 RL------------MLQHKWGATMVLTEPDAGSDVGAGRTRAVRQDDGSWHLTGVKRFIT 198

Query: 237 SPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
           S   D       ++LA+ EG       +  F+VP+   D      G  NG+    ++ K+
Sbjct: 199 SAEHDLSDNIVHLVLARPEGAGPGTKGLSLFVVPKFHVDLLTGALGERNGVYVTNVERKM 258

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G + + T EL F +      G+L+G+++     + ++     +     +++ +      A
Sbjct: 259 GLKVSTTCELTFGDGPVPAKGWLVGEVHDGIAQMFEVIEHARMFVGAKAIATLSAGYQVA 318

Query: 336 IHYARRRHVS------GG-----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-- 382
           + YA+ R         G       +   P ++R++           AL    A   D+  
Sbjct: 319 LDYAKNRIQGADLTATGKDAPRVPITRHPDVRRSLMLQKSYAEGMRALYLYTATFRDQVT 378

Query: 383 -----AKSRSEEAAYARI----MAPITKYWCCKMAPA-VIAEAMECIGGSGYIEERSIAR 432
                  + SEEA  A      + P+ K +  + A   + AE+++ +GGSGY+++  I +
Sbjct: 379 EAEAAGTADSEEARLAARVNDLLLPLVKGFGSERATQLLTAESLQTLGGSGYLQDYPIEQ 438

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           + R+S  +++  G+      D               F  + +D G +   +   ++D+I 
Sbjct: 439 YIRDSKIDTLYEGTTAIQGQDF-------------FFRKIVKDGGVALTWLAGRIQDTID 485

Query: 493 LCKEDKGLARFLTEKIALASS 513
               + G  R   E+ ALA++
Sbjct: 486 A---EVGNGRLKEERAALATA 503


>gi|283781415|ref|YP_003372170.1| acyl-CoA dehydrogenase domain-containing protein [Pirellula staleyi
           DSM 6068]
 gi|283439868|gb|ADB18310.1| acyl-CoA dehydrogenase domain protein [Pirellula staleyi DSM 6068]
          Length = 600

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 70/449 (15%), Positives = 147/449 (32%), Gaps = 38/449 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           G+  +   R    +   Q    R   +        A  + +        V L  T +   
Sbjct: 90  GVLGACLPRESGGLGLSQTAYCRLLEVLGGHCGSTALFVNAHHSIGPRAVVLFGTKQQQT 149

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSG 230
            W PK+ S E+                  LTE   G+D A + +     +DG        
Sbjct: 150 KWLPKLASGEW-------------ISAFALTEPGAGSDAANVQTTATPSADGQSFILNGE 196

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY-QRLKNKIGNRSNATVEL 289
            +W  +  +++   ++A+     G   +   L      G    ++  +K+G R  AT  L
Sbjct: 197 KRWITNGGIANVLTVMARTPDASGKGKISAFLVTPDMPGFHVLEQRMDKLGVRGTATGRL 256

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +       +LG           +     +          +  +  A+ + +RR    
Sbjct: 257 AFRDCVVPRENMLGPEGKGLKVALTVLDFGRVTFGASCTGAAKFCVDRAVDHVQRRVQFD 316

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ IA +     A  A +++ A   D             +   + K +  +
Sbjct: 317 EPLARFELVQQKIAAMTAGQFAMEACTYQTAAMIDHGSDD------FMLETAMLKVFATE 370

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD--VLNLLEKGTNL 464
               ++ +  +  GG  Y  ++   R  R++  N+I  G+ + + +   ++ + + G  L
Sbjct: 371 TLWTILNDTFQLHGGLAYFTDQPFERMLRDARINTIGEGANDVLRVFSSLVGMRDVGLEL 430

Query: 465 FEQLFSTLE-----QDLGSSGKKVITILRDSISLC---KEDKGLARFLTEKIALASSAA- 515
              L + +       ++G    + ++ L  S S+     E    A  L   I    S   
Sbjct: 431 EGVLHAVMHPLSRWTNIGRFAGRKLSQLMASPSVPIRHPELDDEATHLGHLIQRFGSEVE 490

Query: 516 -ALYRAGMNDIADVFLENRFLDNCHSTHC 543
            AL       +   ++ +R  D     + 
Sbjct: 491 WALRTFQKEIVDRQYVLSRLGDTAIDLYA 519


>gi|261206060|ref|XP_002627767.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592826|gb|EEQ75407.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239611010|gb|EEQ87997.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327350745|gb|EGE79602.1| short-chain specific acyl-CoA dehydrogenase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 546

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 79/447 (17%), Positives = 151/447 (33%), Gaps = 35/447 (7%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  ++  +      + + +  H  L            +E                P
Sbjct: 120 PYGDLVPFADPAWYQGYTSMYYNETHAALRK--------EVREWVE---------SEIDP 162

Query: 90  GGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               WD+ +  P   +  +  R    GL    ++ +      K     +    + +   +
Sbjct: 163 HVHDWDEAKAIPEHLYKQMGDRGYLAGLMGVAYEPALSKNQVKCVPPEKWDFFHELIVTD 222

Query: 148 AGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +      +++       P V K    ++  R         +      I L +TE 
Sbjct: 223 ELSRAASGGLVWNLIGGFGIGCPPVIKYGKKELVQR-----ILPAILSGDKRICLAITEP 277

Query: 206 RGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL +
Sbjct: 278 DCGSDVSNISCEAKLTPDGRHYIVNGEKKWITNGIWADYFTTAVRTGEPGMNGISVLLIE 337

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +   
Sbjct: 338 RSAGGVSTRKM-DCQGMSTSGTAYVTFEDVKVPVENLIGKGNQGFKVIMMNFNHERMGII 396

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I  V   RV   E++ YA +RH  G  LID PV++  +A +A  I A+      L     
Sbjct: 397 IQCVRFSRVCYEESVKYAHKRHTFGKRLIDHPVIRMKLAHMARQIEASHNWLENLVFQC- 455

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
           ++   +E A          K            EA +  GG  Y        I R YR+  
Sbjct: 456 QSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYTRGGQGGKIERLYRDVR 515

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A +I  GS   M+   +    K    F
Sbjct: 516 AYAIPGGSEEIMLDLSMRQSLKVHQFF 542


>gi|84517011|ref|ZP_01004368.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
 gi|84509129|gb|EAQ05589.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis
           SKA53]
          Length = 506

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 89/497 (17%), Positives = 170/497 (34%), Gaps = 40/497 (8%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAW 103
           +A   ++   + EL G+ +        A  A      L+A G     +  D +V     +
Sbjct: 18  VAGAGALAAWDPELAGDILG-----HFAGFAERVIAPLNAVGDRQHAQLVDGRVRMPDGF 72

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A   +   DG        +F  +          + L+  A      + +    + + + 
Sbjct: 73  VAAYAQLAQDGWQGLTAPAAFGGMGASPLIAAGVSELFSGANHAMQMVCNLVPGAIATLM 132

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W PK+ S              +    + LTE + G+D++AI  + +   D
Sbjct: 133 KYGTAAQQNAWIPKLASG-------------AALSTMCLTEAQAGSDLSAIRCRAENTGD 179

Query: 224 GIYCLSGHKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKN 277
           G     G K F+S    D       ++LA+      G   +   +    P+ +   R++ 
Sbjct: 180 GWRIT-GEKIFISGGDQDMSAEILHLVLARSSAANAGMNGLSLYMCPAQPD-VSVTRIEE 237

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K+G  ++ T +L F      L+G        +  +     +D A+  V+    +   A  
Sbjct: 238 KMGLHASPTCQLRFDGAKAELIGTEGQGLQAMFTLMNHARIDVALQGVAHASRAADIAAA 297

Query: 338 YARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           YA +R            L     ++R + D       A A+      + + A S     A
Sbjct: 298 YAAQRIQGRQPHGSPALLNQHADVQRMLDDQRHLALGARAMCHIALVAVETADSP----A 353

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               + P+ K +C +         ++ +GG GY+ E  + + +R++   +I  G+     
Sbjct: 354 LCDFLTPLCKVFCSEAGIRAADLGIQILGGYGYLNEYGLEQIWRDARICAIYEGANGIHE 413

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
             +     +     ++ F+ L  DL      V+  L D   L       +  L +  A A
Sbjct: 414 RSIATRGLRAGGGADE-FADLVTDLAHGSAPVLQRLADWQILRSAMSQTSDPLPQAHAFA 472

Query: 512 SSAAALYRAGMNDIADV 528
              A L+ A      D 
Sbjct: 473 QQTANLFFAAAWARIDA 489


>gi|317402667|gb|EFV83221.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 389

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 122/327 (37%), Gaps = 26/327 (7%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
             +   +  A    +     +  ++LM +  + + + P++   E                
Sbjct: 85  ETFARHEGLADFAFAMQGLGSGAISLMGSDALRQRYLPRVARGE-------------AIA 131

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              L+E   G+D+AA+  + +   D         W  +  ++D + + A+     G   +
Sbjct: 132 AFALSEPDAGSDVAALACEARLEGDHYVLNGAKTWISNGGIADFYCVFARTGEAPGARGI 191

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL-- 315
              + D    G         I     AT  + F N    +   L     G    M  L  
Sbjct: 192 SAFVVDADTPGFEISERIELIAPHPLAT--ITFDNCRIPVSQRLGEAGQGFKLAMMTLDI 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++   R +L E +  AR R + G  L D  + + A+ D+A  I A+  L++R
Sbjct: 250 FRASVAAAALGFARRALDEGLARARSRRMFGQTLADLQLTQAALGDMATAIDASALLTYR 309

Query: 376 LANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A   D + +  + EAA A++ A        + A +VI  A++  GG+G +    + + Y
Sbjct: 310 AAWMRDVQKQRTTREAAMAKMTA-------TESAQSVIDRALQMFGGAGVVSGMPVEKLY 362

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461
           RE  A  I  G+     L +   L K 
Sbjct: 363 REIRALRIYEGATEVQKLIIARELLKA 389


>gi|118389496|ref|XP_001027832.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|89309602|gb|EAS07590.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 621

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 166/461 (36%), Gaps = 60/461 (13%)

Query: 35  NAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           N Y  DS L   +             K+LE LG+  ++    +LA+      PQL  +  
Sbjct: 35  NQYLEDSALNEYLKPLISSEILGKHQKDLEKLGDLAVNK-MLDLAKQCEREQPQLVQFDA 93

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R DK+    AWH +   S   G+  + +D    P   + A  I+  +LY+ +     
Sbjct: 94  YGRRIDKLNLSNAWHKMHEISAEQGIVATAYD----PQNGQYARLIQLIKLYIYSTSSGL 149

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP---TNKAPMQKTSVAIGLGLTEKR 206
           +    ++T  +   L            K    +                   G  +TEKR
Sbjct: 150 YGCPLAMTDGASYVLTQVLAHDSKVLDKKVIGKIQDALNHLTTYNPAEFWTSGQWMTEKR 209

Query: 207 GGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------------- 252
           GG+D+  +  +         Y L G+KWF S+      + LA++                
Sbjct: 210 GGSDVSGSTETVAVNYKPNKYRLYGYKWFSSATDCQVTLALARIIPEGAKLTLEINWQVI 269

Query: 253 ------------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
                       +  FL+    +D   N +   RLK K+G +   T EL    T  +L+ 
Sbjct: 270 TFQNKKEMHKIPLSLFLLKLRKKDKELNKIEIIRLKEKLGTKQLPTAELLLKGTPAYLIS 329

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            +      +  M  +  L ++ +                  R V G  L   P+  + ++
Sbjct: 330 PVGKGIKYISHMLNITRLYNSAL------------------RAVFGNKLSKIPLQVKVLS 371

Query: 361 DIALDIAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           D+ +       L  R+     + +S +    E    RI +PI K +  K    + +E +E
Sbjct: 372 DMEVTFRGNLILLLRVGYWLSKEQSNTATQMEGDLLRISSPILKLYSGKDVVRLCSEGLE 431

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY+E   +   +R+S   +I  G+ N + LD    +
Sbjct: 432 YFGGLGYMENSHLPNLFRDSQVLAIWEGTTNVLCLDFYRAI 472


>gi|254383379|ref|ZP_04998731.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194342276|gb|EDX23242.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 608

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 154/388 (39%), Gaps = 44/388 (11%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
             E          +      + LTE   G+D+ A  ++  + +DG + + G K F++S  
Sbjct: 142 GNEAQKKVAEIAVEKRWGSTMVLTEPDAGSDVGAGRTKAVQQADGSWHIEGVKRFITSGE 201

Query: 240 SDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNR 282
            D        +LA+ EG       +  FLVP+   D      G  NG+    +++K+G +
Sbjct: 202 HDMEENILHYVLARPEGHGPGTKGLSLFLVPKFHFDWETGELGERNGVYATNVEHKMGLK 261

Query: 283 SNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T E+ F +     G+L+GD +     +  +     +     +++ +      A+ YA
Sbjct: 262 ASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFMIIEFARMMVGTKAIATLSTGYLNALEYA 321

Query: 340 RRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE----- 382
           + R                  +   P ++R++           AL    A+  DE     
Sbjct: 322 KERVQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQDEIQLKQ 381

Query: 383 --AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +  S E     ++ PI K +  + +   +A++++  GGSGY++E  I ++ R++  +
Sbjct: 382 AAGEDASAEIGLNDLLLPIVKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKID 441

Query: 441 SILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKED 497
           ++  G+      D     ++         L  T+++ L  + G + +   RD+++    D
Sbjct: 442 TLYEGTTAIQGQDFFFRKIVRDQGASLNVLSETIKKFLAEAVGGEELAGARDALAKAAVD 501

Query: 498 KGL--ARFLTEKIALASSAAALYRAGMN 523
                 + + +  A       +Y+ G N
Sbjct: 502 LEAIVGQMIVDLTATGEDVKNIYKVGQN 529


>gi|156039679|ref|XP_001586947.1| hypothetical protein SS1G_11976 [Sclerotinia sclerotiorum 1980]
 gi|154697713|gb|EDN97451.1| hypothetical protein SS1G_11976 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 809

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 86/453 (18%), Positives = 156/453 (34%), Gaps = 40/453 (8%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  +   S      + + +  H  L       +S   +                 P
Sbjct: 383 PYGDLIPFGDPSWYQGYHSPYFNETHAALREEIREWVSAEIE-----------------P 425

Query: 90  GGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               WD+    P   +  +  R    GL    +   +     K     +    + M   +
Sbjct: 426 NVGEWDEARKVPDEIYKQMGTRGYLAGLMGMHYPTQYTQNRIKSVPPEKWDLFHEMLLTD 485

Query: 148 AGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +      +++       P + K     +  R         +      I L +TE 
Sbjct: 486 ELSRAASGGFVWNVIGGFGIGCPPLVKFGKKPLVER-----ILPGILNGDKRICLAITEP 540

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G+ G   V  LL +
Sbjct: 541 DAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGVWCDYFTTAVRTGKDGMNGVSVLLIE 600

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            S  G+  +++ +  G  S+ T  + F +       L+G  N     +        +   
Sbjct: 601 RSAGGVSTRKM-DCQGVWSSGTTYITFEDVKVPVENLIGKENQGFKVIMTNFNHERIGII 659

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+ +    L +   
Sbjct: 660 IQCLRFSRVCYEESVKYAHKRRTFGKKLIDHPVIRLKLAHMARQIEASYSW---LESLIY 716

Query: 382 EAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRE 436
           +     E  A  R+  PI   K            EA +  GG  Y        + R YR+
Sbjct: 717 QCSKMGETEAMLRLGGPIASLKAQATVTFEFCAREASQIFGGLSYSRGGQGGKVERLYRD 776

Query: 437 SPANSILLGSGNAMV-LDVLNLLEKGTNLFEQL 468
             A +I  GS   M+ L +   L  G  L  +L
Sbjct: 777 VRAYAIPGGSEEIMLDLSIRQSLRVGKALGMKL 809


>gi|115375635|ref|ZP_01462891.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
 gi|115367345|gb|EAU66324.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1]
          Length = 331

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVALMTTPRVHKD 173
                     +        R         ++ G + S           +      R    
Sbjct: 2   GLPVPERHGGLGLDTLTTARVMEALGRGCVDTGLVFSAGAHLFACVMPILEAGDDRQKTQ 61

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           + P++ S E+   N              ++E   G+D+ A+ ++  +  D      G  +
Sbjct: 62  YLPRLCSGEWVGAN-------------AISEPEAGSDVFALKTRAVRDGDSYVLDGGKSY 108

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             + P +D F++ A      G   +   L +    GL   R   K+G  ++    +    
Sbjct: 109 VTNGPDADVFLVYAVTHPTSGYLGLSAFLIEKKTPGLSVGRPFEKMGLSTSPIAPIYLEG 168

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                   L          K  +  + A      V  M   L + + +AR+R      + 
Sbjct: 169 CRVPASAMLGAEGQGAPLFKRSMQWERACLFAAYVGVMERVLEQTVDFARQRKQFKRAIG 228

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+ L + ++  L +R     D  +  S E + A++          + A  
Sbjct: 229 KNQAISHRLADMKLRLESSRLLLYRACWLMDRGQEASMEVSLAKLAI-------SEAAVQ 281

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + ++  GG GY+ E  I R  R++  ++I  G+       + + L
Sbjct: 282 CGLDTLQIHGGMGYVTETGIERVLRDAIPSTIFSGTSEIQRDIIASNL 329


>gi|94314356|ref|YP_587565.1| long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358208|gb|ABF12296.1| Long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 387

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 143/387 (36%), Gaps = 38/387 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N  TP +  +   G   D+  F         ++   GL     D ++           + 
Sbjct: 26  NEITPYVDQWREQGC-CDRAIF--------EKAGEQGLLLMWADEAYGGAGVTDFRYEQI 76

Query: 138 ARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
               L+   +   +L   S   A  +  + T    + W     S                
Sbjct: 77  LFEELIRHGDVGVYLTLHSRLVAPYIGRLGTEAQKRRWLTGAASG-------------KT 123

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVG 254
            + + +TE   G+D+A I ++ ++  DG + ++G K F+S+   +DA I++A+       
Sbjct: 124 ILAIAMTEPGAGSDLAGIGARAERR-DGGWVINGAKTFISNGHNADAVIVVARTNPDERR 182

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVED 311
            F +   + +    G    R   K+G  +  T EL F++ F      L         + +
Sbjct: 183 AFGL--FVVERGMAGFERGRRLKKLGLDAQDTAELFFNDVFVPDENVLGNPARGFAYLAE 240

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A  S++  + +    + Y + R   G  +      +  +A    ++ A   
Sbjct: 241 GLEEERLLCACQSIAHAQSAFDLTLPYVKERRAFGRPIGALQNTRFVLARRRAELDAMQI 300

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
               L    +  +  +  AA A+++         ++   VI + ++  GGSGY++E  I+
Sbjct: 301 WLDALVMEHNAGRLDAVTAASAKLL-------STELENRVIDDCLQLHGGSGYMDEYRIS 353

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR++  + I  G+   M+  +   L
Sbjct: 354 RMYRDARVSRIFAGASEIMLEIISRSL 380


>gi|271499363|ref|YP_003332388.1| acyl-CoA dehydrogenase domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270342918|gb|ACZ75683.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech586]
          Length = 383

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 139/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        +  +     +  +   L  +A+  A   +  
Sbjct: 33  DQTGTYP--KEFMKALSDNGISLLGVPEEYNGI--PADYVTQMLALMEVAKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D ++ 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNSSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           ++   +  +G   L+G K F++      + ++LA+  E +           + +  G+  
Sbjct: 137 STSYTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDPEPKDPKKAFSLWWVESNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVMKVAWQADMHQS---- 310

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R  A + K +C + A  VI +A++ +GG GY ++  ++R +R+     I  G+   
Sbjct: 311 ---LRTSAALCKLYCARTALEVIDDAIQIMGGLGYTDDARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYIAGRQILK 378


>gi|163855520|ref|YP_001629818.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259248|emb|CAP41548.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 380

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 136/373 (36%), Gaps = 30/373 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            RWD+    P    +       G    +    +  +    +  I          ++    
Sbjct: 30  RRWDREGIFPE--DVYAAMAGAGFVSMVVPAEYGGLGSPMSDCIILYEEVARPAVDFATR 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++     + ++A   +  + +D  P++ + E             + +   LTE   G+D 
Sbjct: 88  IALQAWGSMILADFASEELKRDILPRVATGE-------------LKLSFSLTEPSSGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQV-EGRVGCFLVPRLLEDGSPN 268
           A++ +  ++  D  + L G K F S   +  +  I+ A+   G+     +   L      
Sbjct: 135 ASLATSARRSGDD-WLLRGQKLFSSGAHAPDNMIIVAARTATGKSRHEGISLFLVPNDLP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL  QRL + IG R     E+ F +      +L+G        V        +  A   +
Sbjct: 194 GLHIQRL-DVIGRRILGLTEIFFDDVRIPSRYLIGADGSGWEYVGRHLERERITLAANYI 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                ++ +A+ YA+ R   G  +     +   +AD+A ++     ++   A  +D    
Sbjct: 253 GSASSAVDDAVAYAKERRQFGKPIGKFQSIAHRLADMATELEVGRWITAMAAWRYDNGLP 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +EA+ A       K +  +M   V A  M+ +GG  Y  +  + R++R++   ++  G
Sbjct: 313 CRKEASMA-------KLYVSEMLQRVTASGMQILGGHAYTADHDMQRYWRDARNATVGGG 365

Query: 446 SGNAMVLDVLNLL 458
           +       +   L
Sbjct: 366 TSEIQRQLIARDL 378


>gi|262197815|ref|YP_003269024.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262081162|gb|ACY17131.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 599

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 95/501 (18%), Positives = 177/501 (35%), Gaps = 69/501 (13%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK--------VEFHPAWHALLR 108
           +LE   E+       +    A     + H Y    E   +        V  HP  H L  
Sbjct: 30  QLEAFAEH--GRETFDAIIDATRRVARDHVYPAFAELDSEPPVLEQGAVRVHPRLHELFP 87

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           R    GL  +    S   +         A+   + A       ++ +  +A ++    T 
Sbjct: 88  RIRELGLQAATRPESAGGLALPHTVAGLASLYLMAANCGIYGYLALTQGAAHLIEAFGTD 147

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + +  ++++ E+  T             + LTE + G+ +A + +      +G Y +
Sbjct: 148 GQKELFMRRMYAGEWTGT-------------MALTEPQAGSSLADVQTVATPTDEGHYLI 194

Query: 229 SGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGSP---NGLCYQR 274
            G K F+S    D       ++LA++EG       +  F VP+    G     N +    
Sbjct: 195 RGSKIFISGGDHDLADNIVHLLLARIEGAPAGTRGLSLFAVPKRRLAGDALVENDVHSAG 254

Query: 275 LKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           + +KIG R+  ++ + +    +  G+L+G+ +     +  M     L   +  V+   V+
Sbjct: 255 MVHKIGWRALPSMVMSYGEEGDCHGWLVGEAHRGLAHMFQMMNEARLSVGMSGVATASVA 314

Query: 332 LAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRL--- 376
             E++ YAR R   G              +I+   ++R +      I    AL  R    
Sbjct: 315 YHESLMYARTRLQ-GRPLGRKNADSEPVAIIEHADVRRMLLRQKAIIEGGLALLVRASKY 373

Query: 377 ----ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
               A++ D  + R        ++ PI K +  +        A++  GG GY  E  +  
Sbjct: 374 TDLAAHAADPGQ-RERAQILLDLLTPIAKSFPAERGFEANTLALQIFGGYGYSSEYPVEA 432

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI------TI 486
             RE   NSI  G+     LD+L               TL +++G++ ++          
Sbjct: 433 WLREQKLNSIHEGTTGIQGLDLLGRRIVAGK--GAAVRTLAEEVGATVERARACGVPEAW 490

Query: 487 LRDSISLCKEDKGLARFLTEK 507
            R      +    LA  L E+
Sbjct: 491 RRSLEQALRSTGELASHLGER 511


>gi|78060671|ref|YP_367246.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965221|gb|ABB06602.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 607

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 94/493 (19%), Positives = 171/493 (34%), Gaps = 72/493 (14%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     LR     GL  + +   ++ +        RA   YL+A    G    P
Sbjct: 71  ERVTINPEVGVALRAFADAGLVSAAFPAEWDGMSLPST-VERAGMAYLLA-ANPGTAGYP 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +T A+   LM      +                  M +      + L+E + G+ +A I
Sbjct: 129 FLTIANANLLMAHGERAR-----------VEHYVKAMSEGRCFGTMCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR----------VGCFLVP 259
            ++     DG Y L G+K ++S    +       ++LA++             +  F VP
Sbjct: 178 RTRAVPGVDGRYRLFGNKMWISGGDHEIAENIVHLVLAKIPDENGQLPPGIQGISLFTVP 237

Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
           R L D     G  N +    + +K+G R      L F              G ++G+   
Sbjct: 238 RKLIDANGLPGERNDVVLAGINHKMGYRGTVNCLLNFGEGRFRPDGEAGAIGEIVGEPGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----------GGILIDQP 353
               +  M     +   + + +        A+ YA+ R                 +I   
Sbjct: 298 GLAYMFHMMNEARISVGLGAAAIGYTGYLHALDYAKTRLQGRTRGERSPAAPQAPIIRHA 357

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKM 407
            ++R +      ++ A AL    A   D+  S      R E      ++ P+ K W  + 
Sbjct: 358 DVRRMLLAQKAYVSGALALCLYAARLSDDVHSLEGTHTREEAQCLLDLLTPVVKSWSSQW 417

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLF 465
                  A++  GG GY  E ++ + YR++  N I  G+     LD+L    +  G+   
Sbjct: 418 GLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGIQALDLLGRKTRANGSAAM 477

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--------IALASSAAAL 517
             L   +   +  S  +    L+   S         R +T+K        + LA++AA L
Sbjct: 478 TLLDRKISGTV--SRARSNDSLQRHASTLDCAWERIRIVTDKLHRLDDPELQLANAAAYL 535

Query: 518 YRAGMNDIADVFL 530
              G   +  ++L
Sbjct: 536 EAFGHVVVGWLWL 548


>gi|147678335|ref|YP_001212550.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274432|dbj|BAF60181.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 379

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 146/394 (37%), Gaps = 33/394 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             QEL R A  +  + +   P  +++D+ +  P    L + +   G +       +    
Sbjct: 6   EQQELVRKAARDFAE-NEIAPLAQKFDEEDICPV--ELFKETARLGFNGVFVPAEYGGAG 62

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                                  +         +    T    + + P + S  +     
Sbjct: 63  LGCTEMAIILEETGRYSAGFAVSLVAHYMGTYAIMTWGTEEQKRKYLPALCSGSF----- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLA 247
                     G  LTE  GG+D +   +   +++DG + L+G K F+++    D  ++ A
Sbjct: 118 ---------GGFSLTEPGGGSDFSGQKTSA-RLADGKWVLNGRKCFITNSHCMDVNVVTA 167

Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           +  E   G   +   + +G+  G    R + K G R + T ++  +N        L    
Sbjct: 168 RTGEDAEGRPQISVFIIEGNAPGHAPGRKEKKAGLRGSCTGDIVLNNVQLPQSCLLGKPG 227

Query: 307 GPVE----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             ++     +  +    +A +++  +R  L E++ +AR R + G  L     ++  IA  
Sbjct: 228 EGIKIALGTLSGMGRCGTAAVALGILRGCLEESVKFARNRVIYGKPLSKLTNIQFIIAQN 287

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  +++  A   D       E + A       K++  + A       ME +GG 
Sbjct: 288 RTDYEAARLMTYNAAGMRDAGMPCGAEMSMA-------KFFASEAAVNAARRTMELMGGY 340

Query: 423 GYIEERSIARHYRESPANSILL-GSGNAMVLDVL 455
           G I +  ++R+ R++  ++I   G+ + M + + 
Sbjct: 341 GVITDYPVSRYLRDA-VSAIPACGTSHIMQIIIA 373


>gi|126343227|ref|XP_001377239.1| PREDICTED: similar to Acyl-CoA dehydrogenase (3J649) [Monodelphis
           domestica]
          Length = 364

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 128/341 (37%), Gaps = 17/341 (4%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSR 181
            F P+       +  +    MA+ E G + S  V++A ++   M TP +      +  S 
Sbjct: 28  PFSPLAEYGGQGLDFSYQIAMAE-ELGTIRSMGVSTAILLQTSMATPAL-----ERFGSE 81

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P         LG++E   G+D++ I ++ +             W  S   +D
Sbjct: 82  ELKQRFLVPSIAGDFVACLGVSEPGAGSDVSNIQTRAKLRGGDYIINGSKMWTTSGSQAD 141

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
              +LA             L    +  G+   +  +K+G  ++ TV++ F +       L
Sbjct: 142 WMCLLANTGAGPPHLNKSLLCVPMNLAGIHVSKSIDKLGLNASDTVQVFFEDVRVPRKFL 201

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+                + +  M ++ M   + + I YAR R +    L+D  V+   
Sbjct: 202 IGEEGRGFHYQMLQFQEERMSATAMVLTPMADIIRQTIDYARGRVLFNKPLLDHQVVHFR 261

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++A ++    +L +R           +E       +  + K    ++   V    ++ 
Sbjct: 262 LAELATELELLRSLLYRAVAQHTRGLDVTE-------LVSMGKLKAGRLCREVTDSCLQF 314

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            GG GY  +  ++R +R+    SI  G+   M+  +   ++
Sbjct: 315 WGGQGYTHKALVSRLFRDLRVTSIGGGADEVMLAIICKYMD 355


>gi|320011622|gb|ADW06472.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 409

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 68/408 (16%), Positives = 128/408 (31%), Gaps = 36/408 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G        
Sbjct: 34  DLAIRDTVRTWA--ADRVLPHIAEWYENGEL-------PGIRELARELGSLG--ALGMSL 82

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                    A +   A L L A        +      +   +    +    + W P + +
Sbjct: 83  KGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKERWLPGMAA 142

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                  GLTE   G+D A + ++ ++            W  +  ++
Sbjct: 143 GE-------------TIGCFGLTEPDHGSDPAGMRTRAERDGTDWVLTGRKMWITNGSVA 189

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              ++ AQ +   G   +   +      G     +++K   R++ T EL           
Sbjct: 190 GVAVVWAQTDEEGGGSGIRGFVVPTDSPGFSAPEIRHKWSLRASVTSELVLDGVRLPADA 249

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L  +TG    +  L          ++   R S   A+ YA+ R   G  +    + +  
Sbjct: 250 VLPGATGLRGPLSCLSHARYGIVWGAMGAARASFEAALDYAKSREQFGRPIGGFQLTQAK 309

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+AL++     L+  L    D  + R E+ ++        K    + A  +   +   
Sbjct: 310 LADMALELHKGILLAHHLGRRMDAGRIRPEQVSFG-------KLNNVREAIEICRTSRTI 362

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 363 LGANGVSLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 409


>gi|264677858|ref|YP_003277764.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262208370|gb|ACY32468.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 380

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 137/386 (35%), Gaps = 29/386 (7%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A  +             WD+    P    L R++   GL    +            H 
Sbjct: 16  RFAREHIAPHVT------AWDEAGEFP--RQLYRQAAELGLLGIGYPEELGGTA--ATHS 65

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           +RAA    + +    H  S  V ++ +   +  P V       + S          +   
Sbjct: 66  LRAALWLALCR----HGGSGGVLASLLSHNIGLPPVVA-----LGSDALKQLVVPDVLAG 116

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RV 253
                L +TE  GG+D+AA+ ++ ++  D  Y + G K F++S M   +I +A   G   
Sbjct: 117 RKIAALAITEPGGGSDVAALRTRARREGDE-YVIEGEKTFITSGMRADWITVAVRTGEER 175

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  +L  G   GL   +L +K+G + + T  L F         LLG        + 
Sbjct: 176 GASGISLILVPGDSAGLRRSQL-HKMGWQCSDTAHLFFDGVRVPASHLLGAEGEGFRAIM 234

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A  ++   +    EA+ +A++R   G  L    V++  + D+   + +  
Sbjct: 235 HNFNGERLGIACAALGFAQACYDEALAWAQQRQTFGVTLNQHQVIRHKLVDMQQRLRSTE 294

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           A    +    D   S ++      ++    K    +        A++ +GG G++     
Sbjct: 295 AWINAVCARADGGDSGADWVGEVCVL----KNHATQTMQFCADTAVQILGGLGFMRGTLS 350

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456
            R YRE    +I  G+   M      
Sbjct: 351 ERIYREVKVLTIGGGTEEIMKELAAR 376


>gi|149280430|ref|ZP_01886550.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
 gi|149228844|gb|EDM34243.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39]
          Length = 396

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 131/378 (34%), Gaps = 43/378 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K E  P      +R+     +  GL          PV    A     A   LM +
Sbjct: 33  AREWVKQEVSPVIEDFAQRAEFPKHLIKGLGEIGAFGPTIPVEYGGAGLDYIAYGILMQE 92

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S  S         +    T    + + PK+ + E             +   
Sbjct: 93  IERGDSGIRSTASVQGSLVMYPIYTYGTEEQRRKFLPKLATGE-------------LMGC 139

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
            GLTE   G++   + +  +   D         W  ++P SD  ++ A+ E       + 
Sbjct: 140 FGLTEPDHGSNPGGMVTNIKDQGDHYLLNGAKMWISNAPFSDIAVVWARDENGK----IR 195

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
            L+ +    G       NK   R++AT EL F N             G       L  L+
Sbjct: 196 GLIVERGMEGFSTPETHNKWSLRASATGELVFDNVKVPKANIFPDIMGLK---GPLGCLN 252

Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
            A   ++   +  A      A+ Y++ R   G  +    + ++ +A++  +I  A  L +
Sbjct: 253 QARYGIAWGALGAAMDCYDTALRYSKERVQFGKPIAGFQLQQKKLAEMITEITKAQLLVW 312

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RL     E ++ +E+ + A+           ++A  V   A + +GG G   E SI RH 
Sbjct: 313 RLGVLKSENRASAEQISMAKR-------NSVELALDVARNARQMLGGMGITGEYSIMRHM 365

Query: 435 RESPANSILLGSGNAMVL 452
               +     G+ +  +L
Sbjct: 366 MNLESVVTYEGTHDIHLL 383


>gi|154295184|ref|XP_001548029.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10]
 gi|150844218|gb|EDN19411.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10]
          Length = 554

 Score =  212 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 86/453 (18%), Positives = 155/453 (34%), Gaps = 40/453 (8%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  ++  S      + + +  H  L       +S   +                 P
Sbjct: 128 PYGDLIPFADPSWYQGYHSPYFNETHAALREEIREWVSAEIE-----------------P 170

Query: 90  GGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               WD+    P   +  +  R    GL    +   +     K     +    + M   +
Sbjct: 171 NVGEWDEARKVPEEIYKQMGTRGYLAGLMGMHYPTQYTENRIKSVAPEKWDLFHEMLLTD 230

Query: 148 AGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                       +++       P + K     +  R         +      I L +TE 
Sbjct: 231 ELSRAGSGGFVWNVIGGFGIGCPPLVKFGKKALVER-----ILPGILNGDKRICLAITEP 285

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G+ G   V  LL +
Sbjct: 286 DAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGKDGMNGVSVLLIE 345

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
            S  G+  +++ +  G  S+ T  + F +       L+G  N     +        +   
Sbjct: 346 RSAGGVSTRKM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGII 404

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I  +   RV   E + YA +R   G  LID PV++  +A +A  I A+ +    L +   
Sbjct: 405 IQCLRFSRVCYEECVKYAHKRRTFGKKLIDHPVIRLKLAHMARQIEASYSW---LESLIY 461

Query: 382 EAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRE 436
           +     E  A  R+  PI   K            EA +  GG  Y        + R YR+
Sbjct: 462 QCSKMGETEAMLRLGGPIAGLKAQATVTFEFCAREASQIFGGLSYSRGGQGGKVERLYRD 521

Query: 437 SPANSILLGSGNAMV-LDVLNLLEKGTNLFEQL 468
             A +I  GS   M+ L +   L  G  L  +L
Sbjct: 522 VRAYAIPGGSEEIMLDLSIRQSLRVGKALGMKL 554


>gi|229192908|ref|ZP_04319865.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876]
 gi|228590518|gb|EEK48380.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876]
          Length = 347

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 137/351 (39%), Gaps = 31/351 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVAL 164
           +++     G+  +   + +  +        R   +   A      L++  V+     +  
Sbjct: 1   MIQEISSYGVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESIKR 60

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P+             M K ++     LTE   G+D  A+ +  ++++D 
Sbjct: 61  WGTEEQKRKWLPE-------------MAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH 107

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW   + ++D F++ A  EG+     V   + + S  G+   ++   + + S+
Sbjct: 108 FILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMKGVSTNKMSKLLASNSS 162

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
              E+   +        L    G    +     LD    S++   V++A+      + Y+
Sbjct: 163 HIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVAYS 221

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           RRR      + +   ++  +A+ +++I AA +L           K R +    A I   I
Sbjct: 222 RRRKQGNRYICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDAVIETTI 275

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 276 AKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|121608860|ref|YP_996667.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553500|gb|ABM57649.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 394

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/387 (20%), Positives = 140/387 (36%), Gaps = 33/387 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+  E  PA H + ++    G        ++       ++ +  A      
Sbjct: 20  EEINPHVDDWEAAEIFPA-HEIFKKLGRLGFLGLCQPEAYGGAGLDYSYSLAMAET---- 74

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               GH+    V  A  V   M TP + +       S E      AP     +   +G++
Sbjct: 75  ---LGHIHCGGVPMAIGVQTDMCTPALARHG-----SEELKQQFLAPAIAGDMVGCIGVS 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GRVGCF 256
           E   G+D+A I S  +K            W  +S  +D   ML   +             
Sbjct: 127 EPDAGSDVAGIRSVARKDGADYLISGQKMWITNSLQADWMCMLVNTDSGSGSAHKNKSLV 186

Query: 257 LVPRLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK 313
           +VP     G     G+   +   KIG  S+ T  L F          +     G V  M+
Sbjct: 187 IVPLRAGPGGKLTPGVQIAQKIRKIGMHSSDTGLLHFDEVRVPQRYRIGAEGQGFVYQMQ 246

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A  ++  +   +   I +AR+R + GG L DQ  ++  +A++  ++ A  A
Sbjct: 247 QFQQERLWCAASTLETLTHCIDWTIEWARQRQLFGGALADQQWVQFKLAELKTEVEALRA 306

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++R  + +   +   E       +A + K    ++   V    ++  GG GY  E  +A
Sbjct: 307 LTYRACDLYVAGQDVLE-------LASMAKLKAGRLNRTVPDTCLQFWGGMGYTLENKVA 359

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR+    SI  G+   M+  +   +
Sbjct: 360 RMYRDGRLASIGGGADEVMLGIIAKTM 386


>gi|134098486|ref|YP_001104147.1| glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003297|ref|ZP_06561270.1| acyl-CoA dehydrogenase FadE7 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133911109|emb|CAM01222.1| glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 397

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 122/373 (32%), Gaps = 34/373 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GE +++ EF  A   L R     G+     +      +    + +    L          
Sbjct: 46  GEWFERGEFPQA-RELARELGKLGVLGMHLEGYGCAGMSAVDYGLACEELEACDSGLRSL 104

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +      +   +    +    + W P++ + E                  GLTE   G+D
Sbjct: 105 VSVQGSLAMFAIWRWGSEEQKQQWLPRMAAGE-------------AIGCFGLTEPDHGSD 151

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            A++ +  ++            W  +  ++D  ++ A+ E  V  F+VP         G 
Sbjct: 152 PASMRTSARRDGSDWVLNGRKMWITNGTIADVAVVWARTEDGVRGFVVPT-----DTAGF 206

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV----- 325
               +K K+  R++ T EL   +        L  + G       L  L+ A   +     
Sbjct: 207 SAPEIKQKLSLRASVTSELVLDDVRLPAEAQLPGAEGLR---GPLSCLNEARYGIVWGAT 263

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R  L  A+ YA  R   G  +    + +  +AD+A+ +     L+  L    D    
Sbjct: 264 GAGRACLEAALDYAGSREQFGRPIAGFQLTQGKLADMAVRVQNGRLLAMHLGKRKDAGTL 323

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             ++ ++ ++          + A  V   A   +G +G   E  + RH     +     G
Sbjct: 324 LPQQVSFGKLD-------NVRGALEVARTARTILGANGISLEYPVIRHMTNLESVLTYEG 376

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 377 TSEMHALSIGQAL 389


>gi|332304683|ref|YP_004432534.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172012|gb|AEE21266.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 394

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 115/309 (37%), Gaps = 34/309 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    + + PK+   E+                 GLTE   G+D A++ S  +K+
Sbjct: 114 IYAFGSQAQKQRYLPKLARGEW-------------VGCFGLTEPNSGSDPASMLSYARKV 160

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            DG        W  +SP++D FI+ A+++G +  F++     +    GL   +++ K   
Sbjct: 161 DDGYLLNGNKMWITNSPIADVFIVWAKLDGVIRGFIL-----EKGMAGLTSPKIEGKFSL 215

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH---- 337
           R++ T E+   +    L+ + N+             L+ A   ++   +  AE       
Sbjct: 216 RASITGEIVMQDV---LVPEENILPDVKGLKGPFSCLNKARYGIAWGSLGAAEFCWHQAR 272

Query: 338 -YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R      L    ++++ +AD+  +I+       +     D      E        
Sbjct: 273 QYCLDREQFARPLAANQLIQKKLADMQTEISIGLLACLQAGRLMDANDLPPEA------- 325

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   A +  G +G  +E  + RH     A +   G+ +   L +L 
Sbjct: 326 ISLIKRNSCGKALEIARIARDMHGANGVSDEYHVIRHVLNLEAVNTYEGTHDVHAL-ILG 384

Query: 457 LLEKGTNLF 465
             + G + F
Sbjct: 385 RAQTGLSAF 393


>gi|296447753|ref|ZP_06889668.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
 gi|296254730|gb|EFH01842.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium
           OB3b]
          Length = 553

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 137/365 (37%), Gaps = 37/365 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +      +      +     A +  G L + S  +  ++ +  T    
Sbjct: 211 ELGVFGLTIPEEYGGSGMGKIAMCVVSEELSRAYIGVGSLGTRSEIAGELILVGGTEEQK 270

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PKI S E  PT                TE   G+D+A + ++  +  D +Y + G+
Sbjct: 271 QKYLPKIASGEILPTAV-------------FTEPNNGSDLANLRTRATREGD-VYKVVGN 316

Query: 232 KWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQRLKNKIG 280
           K +++ P+ +D   +L +      G   +  LL +             G+    ++  +G
Sbjct: 317 KTWITHPVRADVMTLLVRTNPNEKGYKGLSMLLAEKPRGTDENPFPAKGMTGGEIE-VLG 375

Query: 281 NRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     E+ F N        L G+       + +      + +A  ++   + +L   +
Sbjct: 376 YRGMKEFEIGFDNFEVPAANLLGGEEGKGFKQLMETFESARIQTAARALGVAQAALDLGL 435

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  L   P +   I  +A++I  A  +++  A   DE K    EA  A+++
Sbjct: 436 RYAKERVQFGKPLFSFPRVFDKIVTMAIEIHVARQITYFAAREKDEGKRCDLEAGMAKLL 495

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A A    A++  GG+G+  E  ++R   ++   +I  G+       +  
Sbjct: 496 -------GARVAWAAADNALQIHGGNGFALEYPVSRVLCDARILNIFEGAAEIQAQVIAR 548

Query: 457 LLEKG 461
            L +G
Sbjct: 549 RLLEG 553


>gi|332187490|ref|ZP_08389227.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
 gi|332012419|gb|EGI54487.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp.
           S17]
          Length = 391

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 125/370 (33%), Gaps = 36/370 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           K    PA    +      GL        F  V     A+ + A  +  +       +   
Sbjct: 45  KEHTDPAIFREMG---ELGLLGPTIPEEFGGVGASYVAYGLIAREVERIDSGYRSMMSVQ 101

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +      + PK+ S E+                 GLTE   G+D   +
Sbjct: 102 SSLVMYPIHAYGSDEQKHRYLPKLASGEW-------------IGCFGLTEPDAGSDPGGM 148

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K+  G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 149 RTTAKKVEGGYVLSGAKTWISNAPIADVFVIWAKSEAHGGA--IRGFVLEKGVKGLSAPK 206

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           ++NK+  R++ T  +                   VE +K     L+ A   +S   +  A
Sbjct: 207 IENKLSLRASITGMVMMDEVAV----GEEALLPHVEGLKGPFGCLNRARYGISWGALGAA 262

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E   +A R     R      L    + ++ +AD+  +IA     S R+    DE +    
Sbjct: 263 EFCFHAARQYGLDRKQFDRPLAATQLYQKKLADMETEIALGLQASLRVGRLMDEGR---- 318

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              +A  M  I K      A  +   + +  GG+G   E  + RH       +   G+ +
Sbjct: 319 ---FAPEMISIVKRNNVGKALDIARASRDMHGGNGISGEYQVMRHLMNLETVNTYEGAAD 375

Query: 449 AMVLDVLNLL 458
              L +   +
Sbjct: 376 VHALILGRAI 385


>gi|307205983|gb|EFN84109.1| Glutaryl-CoA dehydrogenase, mitochondrial [Harpegnathos saltator]
          Length = 390

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 122/362 (33%), Gaps = 33/362 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R     G             V   A+ + A  +  +           S   A  + 
Sbjct: 47  KEVMREMGQLGALGCTIKGYGAAGVSSVAYGLIAREVESVDSGYRSAYSVQSSLVAQAIY 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  + + + PK+ S E                  GLTE   G+D  ++ ++    +D
Sbjct: 107 TFGSDALKERFLPKLISGE-------------KIGSFGLTEPNHGSDPGSLETRAVYDAD 153

Query: 224 --GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                      W   SP++D F++ A+ E       V     + +   L   +++ K   
Sbjct: 154 RKAYKLNGSKTWITHSPIADVFVIWAKCEDGQIRGFV--FDREDAKERLSTPKIEGKFSI 211

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI----- 336
           R+++T  +   N        LNV             L++A   ++   +  AEA      
Sbjct: 212 RASSTGMILMDNVVVPEENMLNVQGLKG----PFTCLNNARYGIAWGALGAAEACLRIAR 267

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R      L    ++++ +AD+  DIA       R+    DE ++  E       M
Sbjct: 268 SYTLERRQFQRPLAANQLVQKKLADMMCDIALGLQACLRVGRLKDEGRATPE-------M 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K      A  +   A + +GG+G  +E  + RH     + +   G+ +   L +  
Sbjct: 321 ISMIKRNSAGKALEIARVARDMLGGNGVSDEYHVIRHMVNLESVNTYEGTHDIHALVLGR 380

Query: 457 LL 458
            +
Sbjct: 381 AI 382


>gi|257067267|ref|YP_003153522.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
 gi|256558085|gb|ACU83932.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
          Length = 418

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/409 (21%), Positives = 144/409 (35%), Gaps = 37/409 (9%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G  +LS   Q LA        ++ A  P    +D     P    +L      GL      
Sbjct: 27  GTELLSEEHQRLAARVRDFADEVVA--PASYTYDTERRLPM--EILAEMGAMGLFGLPLP 82

Query: 122 RSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           R+++   R       A   L  + Q  A  L +     A  +    T    +   P +  
Sbjct: 83  RTYDGQGRDYLSLCVAVEQLARVDQSIAVTLEAGLGLGAMPILTFGTAAQKERHLPALAR 142

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS--- 237
            E                  GLTE   G+D     +   ++ DG + + G K F+++   
Sbjct: 143 GEQ-------------LAAFGLTEAEAGSDAGGTRTTA-RLEDGQWVIDGTKQFITNSGT 188

Query: 238 PMSDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           P++    + A    R G        +  ++      G       +K+G  ++ T  L   
Sbjct: 189 PITSLVTITAVTGQRQGRDGRSSPELSSIIVPTDTPGFTVLPGYDKVGWHTSDTHPLLLE 248

Query: 293 NTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                    L     G    + IL    +  A + V   +  L +A+ YAR R V G  L
Sbjct: 249 GVRVPEENLLGERGRGFANFLAILDQGRVALAALCVGAAQGCLEQAVRYARERVVFGRAL 308

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +   +   +A +   +A+A AL    A+  D     S EA+ A       K    + A 
Sbjct: 309 GENQHIAFTLARMQARVASARALMHEAAHRLDAGMPFSREASLA-------KLVGSEAAV 361

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A   +A +  GG+G++ E  +ARHYR+S    +  GS    +  +   L
Sbjct: 362 ANARDACQIWGGNGFLNENVVARHYRDSRVLEVGEGSTEVQLAIIAKHL 410


>gi|206972798|ref|ZP_03233720.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134]
 gi|206731682|gb|EDZ48882.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134]
          Length = 382

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 134/343 (39%), Gaps = 31/343 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHK 172
           G+  +   + +  +        R   +   A      L++  V+     +    T    +
Sbjct: 44  GVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESIKRWGTEEQKR 103

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P+             M K ++     LTE   G+D  A+ +  ++++D        K
Sbjct: 104 KWLPE-------------MAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDHFILNGHKK 150

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W   + ++D F++ A  EG+     V   + + S  G+   ++   + + S+   E+   
Sbjct: 151 WISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKLLASNSSHIAEIHLQ 205

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347
           +        L    G    +     LD    S++   V++A+      + Y+RRR     
Sbjct: 206 DVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVAYSRRRKQGNK 264

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + +   ++  +A+ +++I AA +L           K R +    A I   I KY+  KM
Sbjct: 265 YICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDAVIETTIAKYFASKM 318

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 319 AMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361


>gi|83594394|ref|YP_428146.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
 gi|83577308|gb|ABC23859.1| Isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170]
          Length = 563

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 140/397 (35%), Gaps = 46/397 (11%)

Query: 85  HAYGPGGERWDKVEFH-PAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +    E  DKV  H   WH         ++ +    G+        +  +   +    
Sbjct: 187 EQFRRFAE--DKVVPHCHEWHLSDTLIPLDVIAQMAEMGVFGLTVAEEYGGLGMGKTAMC 244

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
                   A +  G L + S  +A +++L  T    + W P++ S E  PT         
Sbjct: 245 VVTEELSRAYIGVGSLGTRSEIAAELISLGGTEEQKRQWLPRLASGEILPTAV------- 297

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVG 254
                  TE   G+D+A++ S+ ++  D         W   +  SD   +L +      G
Sbjct: 298 ------FTEPNTGSDLASLRSRAERDGDTYRVTGAKTWITHAARSDLMTLLVRTNPQEGG 351

Query: 255 CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-- 303
              +  LL +             G+    +K  +G R     EL F          L   
Sbjct: 352 YKGLSMLLAEKPRGSDEDPFPAKGMAGGEIK-VLGYRGMKEYELSFDGFEVPAANLLGSE 410

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G  + M       + +A  +V   + ++   + YA+ R   G  L   P +   +A 
Sbjct: 411 EGQGFKQLMATFESARIQTAARAVGVAQNAMEVGLRYAQDRVQFGKPLYAFPRVHGKLAW 470

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A++   A  L++R     D  +    EA  A+++A        ++A +    A++  GG
Sbjct: 471 MAVETMVARQLTYRAGREKDSGRRCDIEAGMAKLLAA-------RVAWSNADNALQVHGG 523

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY EE  I+R   ++   +I  G+       +   L
Sbjct: 524 NGYAEEYPISRILCDARILNIFEGAAEIQAHVIARGL 560


>gi|326388272|ref|ZP_08209875.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207438|gb|EGD58252.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 394

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 141/403 (34%), Gaps = 44/403 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++   A+  A  A+   P++       E W + +  P    + R     GL       
Sbjct: 23  ERMIRDAAKSYA--ADRLQPRVI------EAWSQEQTDP---EIFREMGELGLLGPTVPE 71

Query: 123 SFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +  V     ++ + A  +  +       +   S      +    +    + + P +   
Sbjct: 72  VYGGVGASYVSYGLIAREIERVDSGYRSMMSVQSSLVMYPIYAYGSEEQKQKYLPGLARG 131

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E             +    GLTE   G+D A + ++ +K + G        W  ++P++D
Sbjct: 132 E-------------LIGCFGLTEPDAGSDPAGMRTRAEKTATGYRLSGAKTWISNAPIAD 178

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            FI+ A+ +   G   +   + +    GL   ++  K+  RS+ T  ++           
Sbjct: 179 VFIVWAKSDAHGGA--IRGFILEKGMAGLVAPKIGGKLSLRSSITGMIQMDAVEV----G 232

Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVM 355
            +     VE +K     L+ A   +S   +  AE   +A R     R   G  L    + 
Sbjct: 233 EDALLPGVEGLKGPFGCLNRARYGISWGALGAAEFCLHAARQYGLDRKQFGRPLAATQLY 292

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +I      S R+    DE +       +A  M  I K      A  +   A
Sbjct: 293 QKKLADMMTEITLGLQASLRVGRLMDEGR-------FAPEMVSIVKRNNVGKALDIARMA 345

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  GG+G  EE  + RH       +   G+ +   L +   +
Sbjct: 346 RDMHGGNGISEEYQVMRHLANLETVNTYEGTHDVHALILGRAI 388


>gi|312200902|ref|YP_004020963.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311232238|gb|ADP85093.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 622

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/490 (16%), Positives = 171/490 (34%), Gaps = 76/490 (15%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E + +    E    A+ N PQ   +         V    ++    R              
Sbjct: 46  ERLATGPLGESFADADRNPPQ---FDAA---TGTVRLPESFKKSYRSLEEGEWWRLFVPA 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +         A+ L L +       M+    +  +                    E
Sbjct: 100 HLGGLGAPPTVAWAASELILGSNPAVFMYMAGPTFAGIL---------------DQLGTE 144

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
                 A   +      + LTE   G+D+ A  ++  +  DG + + G K F++S   D 
Sbjct: 145 SQKKFAAQAVERQWGATMVLTEPDAGSDVGAGRTRAVQQPDGTWHIEGVKRFITSGDWDI 204

Query: 242 ----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNA 285
                 ++LA+ EG       +  F+VP+ + D      G+ NG+    +++K+G + +A
Sbjct: 205 PENIFHMVLARPEGHGPGTKGLSMFIVPKFMPDPETGAPGARNGVYVTNVEHKMGLKVSA 264

Query: 286 TVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T EL F       G+L+GD++     +  +     +     +++ +      A+ +AR R
Sbjct: 265 TTELRFGEKTPAVGWLVGDVHDGIAQMFQVIEHARMMVGTKAIATLSTGYLNALEFARTR 324

Query: 343 HV--------SGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFD---------- 381
                      G     +I  P ++R +           AL    A+  D          
Sbjct: 325 VQGADLAATDKGAPRVTIIHHPDVRRMLMAQKAYAEGMRALVLYTASFQDTVAAAESEGG 384

Query: 382 -----------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                      +  +    A    ++ PI K    + +  ++A +++  GGSGY+++  +
Sbjct: 385 VPGSRAALSGADGSAAERAARMNDLLLPIVKGVGSERSYELLASSLQIFGGSGYLQDYPV 444

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487
            ++ R++  +++  G+ +    D+     + ++G  L   L        G +G   +   
Sbjct: 445 EQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDQGQALTALLIDIQAFAKGDAGNGTLAKE 504

Query: 488 RDSISLCKED 497
           RD ++   ED
Sbjct: 505 RDQLAAALED 514


>gi|255532223|ref|YP_003092595.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255345207|gb|ACU04533.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 396

 Score =  212 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/348 (19%), Positives = 124/348 (35%), Gaps = 34/348 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL          PV    A     A   LM ++E G     S  S         +    T
Sbjct: 61  GLGEIGAFGPTIPVEYGGAGLDYTAYGILMQEIERGDSGIRSTASVQGSLVMYPIYTYGT 120

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ + E             +    GLTE   G++ + + S  +   D    
Sbjct: 121 EEQRKKYLPKLATGE-------------LMGCFGLTEPDHGSNPSGMVSNIKDKGDHYLL 167

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  ++P +D  ++ A+ E      +V     +    G       NK   R++AT 
Sbjct: 168 NGAKMWISNAPFADIAVVWAKDESGKIRGMV----VERGMEGFTTPETHNKWSLRASATG 223

Query: 288 ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           EL F N       +  D+    GP+  +        A  ++         A+ YA++R  
Sbjct: 224 ELVFDNVKVPKANIFPDVTGLKGPLGCL-NQARYGIAWGALGAAMDCYDTALRYAKQREQ 282

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +    + ++ +A++  +I  A  L +RL     E ++  E+ + A+          
Sbjct: 283 FGKPIGGFQLQQKKLAEMITEITKAQLLVWRLGVLKSENRATPEQISMAKR-------NS 335

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            ++A  +   A + +GG G   E +I RH     +     G+ +  +L
Sbjct: 336 VEVALDIARNARQMLGGMGITGEYAIMRHMMNLESVVTYEGTHDIHLL 383


>gi|254818879|ref|ZP_05223880.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 394

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 135/407 (33%), Gaps = 39/407 (9%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAA 138
            P    Y P G      +   A    +R    + +  H + W    +  VR+ A      
Sbjct: 6   PPAFDRYDPLGLDASLSDDERAVRETVREFCAEHVLPHVAEWFEIGDLPVRELAKGFGQL 65

Query: 139 RLYLM---------AQLEAGHLMSPSVTSAS-----MVALMTTPRVHKDWAPKIFSREYD 184
            L  M         A      L    + +A      MV++  +  +   W     S E  
Sbjct: 66  GLLGMHLDGYGCGGASAVHYGLACVELEAADSGIRSMVSVQGSLAMFAIW--NFGSEEQK 123

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                 M    +    GLTE   G+D AA+ ++ ++            W  +  ++D  +
Sbjct: 124 QEWLPGMATGELLGCFGLTEPDVGSDPAAMKTRARRDGSDWVLTGRKLWITNGSVADVAV 183

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A  +  V  F+VP         G     + +K+  R++ T EL   +        L  
Sbjct: 184 VWANTDNGVRGFIVPT-----KTAGFSANTIHHKLSLRASITSELVLDDVRLPAEAMLPE 238

Query: 305 STGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           + G       L  L  A   +        R +   A+ YA +R   G  +    + +  +
Sbjct: 239 AKGLR---GPLSCLSEARYGIIWGSMGAARSAWQAALDYATQRTQFGRPIAGFQLTQAKL 295

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
            D+A+++     LS  L    D    R E+ ++        K    + A  +   A   +
Sbjct: 296 VDMAVELHKGQLLSLHLGRLKDSVGLRPEQVSFG-------KLNNTREAIEICRTARTIL 348

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           GG+G   E  + RH     +     G+   M   VL     G++ F 
Sbjct: 349 GGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGSDAFR 394


>gi|39942676|ref|XP_360875.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145010043|gb|EDJ94699.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 540

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 141/409 (34%), Gaps = 39/409 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDR 122
            L    +E  + A           P    WD+ +  P   +  + RR    GL  + +  
Sbjct: 141 ALRAEVREWVQTA---------IEPNVTEWDEKKMCPPEIYKEMGRRGYLAGLLGTKYQS 191

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            +     K   +      + M   +            +++       P + K     +  
Sbjct: 192 KYVDNPIKCVAEQDWDLFHEMLITDELSRAGSGGFVWNVIGGFGIGCPPLLKFGKKALVD 251

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
           R         +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +
Sbjct: 252 RIM-----PGILNGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGI 306

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              +   A   G  G   V  LL +    G+  +R+ +  G  S+ T  + F +      
Sbjct: 307 WCDYFTTAVRTGGPGMGGVSLLLIERDFGGVTTRRM-DCQGVWSSGTTYVTFEDVKVPVE 365

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG  N     +        +   I  V   RV   E++ YA +R   G  LI+ PV++
Sbjct: 366 NLLGKENKGFPCIMTNFNHERIGIIIQCVRFSRVCFEESVKYANKRRTFGKRLIEHPVIR 425

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPA 410
             +A +A  I A       +    ++              A  +  A +T  +C      
Sbjct: 426 YKLAHMARQIEATYNWLESVVYQCEKMDDTQAMMLLGGPIAGLKAQATVTFEFC------ 479

Query: 411 VIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
              EA +  GG  Y        + R YR+  A +I  GS   M+   + 
Sbjct: 480 -AREASQIFGGLSYSRGGQGAKVERLYRDVRAYAIPGGSEEIMLDLSIR 527


>gi|218780497|ref|YP_002431815.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761881|gb|ACL04347.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 391

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 135/379 (35%), Gaps = 28/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--L 142
               P  + W++    P    L ++    G     +D  +        ++         +
Sbjct: 32  KEINPNIDEWEEAGITPL-KELFKKMGDLGFLGIRYDPKYGGQGLDYWYETVFLEELGRI 90

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                A  +   +  +   +    +  +   +     S               +   + +
Sbjct: 91  RGLGLAIAISVQTNMATPAIDEFGSEYLKDKYLRGAISG-------------DLVGAIAV 137

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D++A+ S  +K     Y L+G K F+++   +D + +LA+     G       
Sbjct: 138 TEPAAGSDVSALQSTAKKDG-SSYVLNGSKMFITNGTQADFYTLLARTSDEPGYHAFSLF 196

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDS 320
           +      G+   R   KIG   + T EL F +        +     G +  M+   +   
Sbjct: 197 VVPADLPGVHVSRKLEKIGVWCSDTAELFFDDVRIPAENLIGQEGEGFIYQMRQFQHERF 256

Query: 321 AIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           +++    +  R  +   + Y R R V G  LI +  ++  + D   ++     LS+ +  
Sbjct: 257 SLLPPIYTAAREIIDMTVDYLRERVVFGKPLIKRQALQHQLVDWITEVECLKQLSYEIVR 316

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                   S+E         + K +  ++  +++A  +   GG G+++E  I+R+YR+S 
Sbjct: 317 IKMAGLDASKE-------ISMGKLYAGRIFNSMVAGCLRMHGGMGFMKEMPISRYYRDSI 369

Query: 439 ANSILLGSGNAMVLDVLNL 457
              I  G+   M   +  L
Sbjct: 370 GLGIGGGADEVMKDVIAKL 388


>gi|83855022|ref|ZP_00948552.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
 gi|83842865|gb|EAP82032.1| isobutyryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1]
          Length = 561

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 139/397 (35%), Gaps = 46/397 (11%)

Query: 85  HAYGPGGERWDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       +KVE F   WH         ++      G+        F      +A   
Sbjct: 186 EQFRRYA--VEKVEPFAHEWHLKDELIPIEVINELAEMGVFGLTIPEEFGGFGLSKASMC 243

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T    + W P+I S E  PT         
Sbjct: 244 VVSEELSRGYIGVGSLGTRSEIAAELIIAGGTDAQKEKWLPRIASAETLPTAV------- 296

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254
                  TE   G+D+ ++ ++  K  +         W   +  +    +LA+ + +   
Sbjct: 297 ------FTEPNTGSDLGSLRTRAVKDGNDYKITGNKTWITHAARTHVMTLLARTDPQTSN 350

Query: 255 CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGD 301
              +   L + +P          G+    ++  +G R     EL F          L G+
Sbjct: 351 YKGLSMFLAEKTPGNDANPFPSEGMTGGEIE-VLGYRGMKEYELGFDGFHVKGENLLGGE 409

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +      + +A  ++   + +L  ++ YA  R   G  LI+ P +   +A 
Sbjct: 410 EGKGFKQLMETFESARIQTAARAIGVAQSALDISMQYAIDRKQFGKSLINFPRVSSKLAM 469

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A++I  A  L++  A   DE +    EA  A+++         ++A A     ++  GG
Sbjct: 470 MAVEIMIARQLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGG 522

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G+  E  I+R   ++   +I  G+       +   L
Sbjct: 523 NGFALEYKISRVLCDARILNIFEGAAEIQAQVISRRL 559


>gi|325000306|ref|ZP_08121418.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 589

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 101/536 (18%), Positives = 190/536 (35%), Gaps = 66/536 (12%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYN---TPQLHAYGPGGERWDKVEFHPAWHA 105
            F     + ++ + +       ++ A     N    P        G    +VE H     
Sbjct: 32  RFADHSRETVDAVLDLAAEIATEKFAPHNRRNDVEEPVFVGTDGVG----RVELHDEVAP 87

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            LR +   GL  +  D +   +       +     +  A +        SV +A+++  +
Sbjct: 88  ALRAAAEAGLLSATMDEAAGGLQLPHVVGVAVQAWFHAANVGTWAYAMLSVANANLLLAL 147

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
             P + + + P +       T             + L+E + G+ +A IT++ +   DG 
Sbjct: 148 ADPALVERYVPPMLEGRMHGT-------------MCLSEPQAGSSLADITTRAEPAPDGT 194

Query: 226 YCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQR 274
           Y ++G K ++S    +       ++LA+V G       +  FLVP++L DG  N +    
Sbjct: 195 YRVTGTKMWISGGDHELGENIVHLVLAKVPGGPAGVRGISLFLVPKILPDGRRNDVALAG 254

Query: 275 LKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           + +K+G R      L F       G L+G        +  M     +     + +     
Sbjct: 255 VNHKMGYRGTVNTLLAFGESGGAVGHLVGAEGQGLAAMFLMMNEARVGVGAGAAALACTG 314

Query: 332 LAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             +++ YAR R                 ++    ++R +         A AL        
Sbjct: 315 YLKSLDYARSRPQGRPAGEKDPSSPMVPIVRHADVRRMLLAQKSYAEGALALVLYCGRLV 374

Query: 381 DEAK--SRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           DE +     EEA      + PI K W  +      A A++  GG GY  E  + +HYR++
Sbjct: 375 DEERTGPDPEEAHLLLETLTPIAKSWPSQWGLEANALAIQVQGGYGYSREYDVEQHYRDN 434

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
             N+I  G+       L    ++  G   F  L + +   +G +G    T      ++ +
Sbjct: 435 RLNAIHEGTHGIQAADLLGRKVVMAGGAGFVALRNRIADTIGRAGADPATS-----AMSE 489

Query: 496 EDKGLARFLTEKIA-----------LASSAAALYRAGMNDIADVFLENRFLDNCHS 540
           + +G    L E  A           LA+++  L  AG   +A ++L+         
Sbjct: 490 QLQGALDRLVEVTATLHAHPDAEERLANASVYLEAAGHVVVAWLWLDQVLAAAGRD 545


>gi|268316992|ref|YP_003290711.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334526|gb|ACY48323.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 415

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 125/363 (34%), Gaps = 40/363 (11%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL     D  +        A+ + A  L  +       +   S      +    
Sbjct: 56  REMGELGLLGVTIDPKYGGGGASYTAYGLIARELERVDSAYRSFMSVQSSLVMFPIEKYG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + PK+ + E             +    GLTE   G+D  ++ +  +++  G  
Sbjct: 116 TEEQKRKYLPKLATGE-------------LIGCFGLTEPDHGSDPGSMETTARRVDGGWI 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                 W  ++P++D  ++ A+       EG +  F++ R        GL     KNK+ 
Sbjct: 163 LNGTKAWITNAPIADIAVVWARAKEHPDDEGEIMGFILER-----DMPGLSTPETKNKMS 217

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH--- 337
            R+++T E+   + F     D NV  G          L +A   ++   V  AE  +   
Sbjct: 218 LRASSTGEIVMEDVFVP---DANVLPGVRGLRGPFSCLSNARYGIAWGTVGAAEDCYQRT 274

Query: 338 --YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    +++  +A++  +I     L FRL    DE K    +      
Sbjct: 275 RRYVMERTQFGYPLAAMQLIQTKLANMLTEITQMQLLVFRLGQLADEGKVTPAQ------ 328

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K      A  +   A +  G +G + E  +  H     + +   G+ +   L + 
Sbjct: 329 -ISLAKRNNAGKALEIARMARDMHGANGIVGEYRVIHHMVNLESVNTYEGTYDIHGLILG 387

Query: 456 NLL 458
             +
Sbjct: 388 REI 390


>gi|41409976|ref|NP_962812.1| FadE7 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398809|gb|AAS06428.1| FadE7 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 398

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 116/368 (31%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                 + +    L          +      +   + 
Sbjct: 60  RELAREFGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIW 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E             +    GLTE   G+D AA+ ++ ++   
Sbjct: 120 NFGSEEQKRQWLPGMATGE-------------LLGCFGLTEPDVGSDPAAMKTRARRDGS 166

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A  +  +  FLVP         G     + +K+  R+
Sbjct: 167 DWVLDGRKLWITNGSVADVAVVWAGTDDGIRGFLVPT-----DTPGFTANTIHHKLSLRA 221

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +     L    +  G       L  L  A   +        R +   A+ Y
Sbjct: 222 SITSELVLDDVR---LPGEAMLPGATGLRGPLSCLSEARYGIIWGARGAARSAWQAALDY 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    + +  + D+A+++     LS  L    D    R E+ ++      
Sbjct: 279 ATQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDSTGLRPEQVSFG----- 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL   
Sbjct: 334 --KLNNTREAIEICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQA 390

Query: 459 EKGTNLFE 466
             G + F 
Sbjct: 391 FTGADAFR 398


>gi|311897526|dbj|BAJ29934.1| hypothetical protein KSE_41480 [Kitasatospora setae KM-6054]
          Length = 609

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/499 (16%), Positives = 175/499 (35%), Gaps = 65/499 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  +     +  A      A+ N P    + P     +       +    +  +      
Sbjct: 42  LSEISRLAENDLAASFV-DADRNPPV---FDP---ETNTAPIPETFKKSYQTFMDAEWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                     V   +     A   L +        S    +  +    T  +     A +
Sbjct: 95  LGIPEGIGGQVTPNSLVWAYAEQVLGSNPAIWMYSSGPAFAGVVFDEGTEEQQK--VAQR 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +  R +  T             + LTE   G+D+ A  ++  K  DG + + G K F++S
Sbjct: 153 MVERLWGAT-------------MVLTEPDAGSDVGAGRTKAVKQEDGSWHIEGVKRFITS 199

Query: 238 PMSD-----AFIMLAQVEGRV------GCFLVPRLLED------GSPNGLCYQRLKNKIG 280
              D       ++LA+ EG        G ++VP+   D      G  NG+    +++K+G
Sbjct: 200 GEHDMSENIVHLVLARPEGGKPGTKGLGLYIVPKYDFDWEIGELGERNGVYATNVEHKMG 259

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T E+ F       G+LLG+       +  +     +     +++ +      A+ 
Sbjct: 260 LKASNTCEMTFGAKHPAKGWLLGETVDGIRQMFKIIEFARMMVGTKAIATLSTGYLNALE 319

Query: 338 YARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--- 382
           YA+ R                  +   P ++R++           AL    A+  D+   
Sbjct: 320 YAKERVQGADLAQFMDKTAPRVTITHHPDVRRSLLTQKAYAEGMRALVLYTASVQDDMLA 379

Query: 383 AKSRSEEAAYARIMA----PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           A+ R E  A A  +     PI K +  + +   +A++++  GGSGY++E  I ++ R++ 
Sbjct: 380 ARLRGEHDAAAERLNDLLLPIVKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAK 439

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSIS-LC 494
            +++  G+      D     +++ G      +   + + L +  G   +   RD ++   
Sbjct: 440 IDTLYEGTTAIQGQDFFFRKIVKDGGQALTAVNEQIGKFLATGEGGAALAAERDLLAKAA 499

Query: 495 KEDKGLARFLTEKIALASS 513
            + + +   L   +     
Sbjct: 500 GDLEAIVGTLIADLTAVEQ 518


>gi|254437510|ref|ZP_05051004.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|254440501|ref|ZP_05053995.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252956|gb|EDY77270.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198255947|gb|EDY80261.1| Acyl-CoA dehydrogenase, N-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 399

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 137/402 (34%), Gaps = 42/402 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E ++S  A+  A   +   P++          D+    P    + R     GL       
Sbjct: 27  ERMISDAARAFAS--DRLLPRIE--DAY---LDE-HTDP---EIFREMGESGLLGVTLPE 75

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSR 181
            +             +R           +MS  S      +    +    + + PK+ S 
Sbjct: 76  EYGGAGASYVSYGLVSREVERIDSGYRSMMSVQSSLVMFPIYAYGSEAQKQKYLPKLSSG 135

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           EY                 GLTE   G+D   + ++  K   G   +    W  +SP++D
Sbjct: 136 EY-------------IGCFGLTEPDAGSDPGGMKTRAIKTDSGYRLVGSKMWISNSPIAD 182

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            F++ A+ E   G   V   + +    GL   ++  K+  R++ T E+  +N     +G+
Sbjct: 183 VFVVWAKSEVHGGK--VRGFVLEKGMKGLSAPKIAGKLSLRASVTGEIVMNNV---EVGE 237

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
             +             L+ A   +S   +  AE     A  Y   R      L    + +
Sbjct: 238 EAILPNTEGMSGPFGCLNRARYGISWGVMGAAEDCFHRARQYGLDRKQFDRPLAATQLYQ 297

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
           + +AD+  +IA     + R+   FDE +       +A  M  + K   C  A  +   A 
Sbjct: 298 KKLADMETEIALGLQAALRVGRLFDEGR-------FAPEMVSLIKRNNCGKALDIARHAR 350

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG+G      + RH +     +   G+ +   L +   +
Sbjct: 351 DMHGGNGIQIGYHVMRHAQNLETVNTYEGTHDVHALILGRAI 392


>gi|324999836|ref|ZP_08120948.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 402

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 56/278 (20%), Positives = 117/278 (42%), Gaps = 19/278 (6%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
            +      + L+E   G+D+AA+ ++  +  D        +W  ++  +D   +L +   
Sbjct: 126 ARGGWIGAIALSEPDAGSDLAAVETRAVRDGDEYVVTGRKRWTGNAKAADFVQVLVRTAD 185

Query: 250 --EGRVGCFLVPRLLEDG----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
              G      +  ++ +      P+GL    + +KIG     T +LEF      +   L 
Sbjct: 186 PEPGEKRSAGLATVVVEKQRDTFPDGLTGTPI-DKIGYHGFVTWDLEFDGLRVPVANQLG 244

Query: 304 VSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                  D +    +  + +A  +V   R ++ + + Y +RR      + D   ++  +A
Sbjct: 245 AGGEGFADAQAWLNIARVHTAARAVGLARAAVEDCVRYLQRRRQFEHPIGDFQAVRFTLA 304

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A  +  A +    +A+  D+ +S   EAA A+++A        +MA  V A+ ++  G
Sbjct: 305 TMAARVEQARSFYQHVAHRLDQGESCEREAAMAKLVA-------TEMAAEVTADGIQLHG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+GY  E  + RH+R++   +I  G+       + + L
Sbjct: 358 GNGYTTEHQVERHWRDARLTTIFEGTSEIQKKIIADRL 395


>gi|296271278|ref|YP_003653910.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296094065|gb|ADG90017.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 610

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/506 (17%), Positives = 186/506 (36%), Gaps = 69/506 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +    E    A+ N P    + P       V+   ++    +  +            
Sbjct: 47  RLATGPLAESFEDADRNPPV---FDPATH---SVKMPESFKKSFQAWMDAEWWRLELPPE 100

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                  ++     A L L +        S     A ++ ++ TP   + +A     R +
Sbjct: 101 LGGTPAPRSLVWSVAELVLGSNPAIWMYASGPAF-ARLLYMLGTPEQKR-FAELAVERRW 158

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
             T             + LTE   G+D+ A  ++     DG + + G K F++S   D  
Sbjct: 159 GST-------------MVLTEPDAGSDVGAGRTKAIPQPDGTWHIEGVKRFITSAEHDMA 205

Query: 243 ----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNAT 286
                ++LA+ EG       +  FLVP+ L D         NG+    ++ K+G + + T
Sbjct: 206 ENIFHLVLARPEGAGPGTKGLSMFLVPKYLVDLETGELRERNGVYVTNVEKKMGLKVSTT 265

Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            EL F       G+L+G+++     +  +     +     +++ +      A+ +A+ R 
Sbjct: 266 CELRFGEKHPAIGYLVGNVHDGIRQMFLVIEHARMMVGTKAIATLSTGYLNALEFAKNRV 325

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAK 384
                            +   P ++R +           AL    +   D       E +
Sbjct: 326 QGADMTQMADKTAPRVTITHHPDVRRELMLQKAYAEGMRALVIYTSTFQDAVQIAEAEGR 385

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++  A   ++ PI K    + +  ++A +++ +GGSG++++  I ++ R+S  +S+  
Sbjct: 386 DDADAKAMNDLLLPIVKGMGSERSYEMLARSLQTLGGSGFLQDYPIEQYIRDSKIDSLYE 445

Query: 445 GSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           G+     +D+    ++        QL+S ++    S        L++   L  E     +
Sbjct: 446 GTTAIQGMDLFFRKIVRNQGKALGQLYSEIKAFAASDAGN--GRLKEERKLLDEAADEVK 503

Query: 503 FLTEKI-----ALASSAAALYRAGMN 523
            + +K+     A A +   +Y+ G+N
Sbjct: 504 AMVDKMVGWAIASAETPKEIYKVGLN 529


>gi|115899456|ref|XP_785005.2| PREDICTED: similar to ENSANGP00000019082 [Strongylocentrotus
           purpuratus]
 gi|115949323|ref|XP_001190363.1| PREDICTED: similar to ENSANGP00000019082 [Strongylocentrotus
           purpuratus]
          Length = 512

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 121/342 (35%), Gaps = 28/342 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+   +P     ++     GL        +            A           
Sbjct: 55  PNAAEWDRNHTYPV--KQVKGLGELGLLAVSVSEKYGGTNLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +          T +  +++              AP           L+E   
Sbjct: 113 GTIMSVNNSLYLGPLEGFGTEKQKEEFI-------------APFVNGDRVGCFALSEPDN 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++  +   D         W  +   ++A I+ A+ +  +    +   +     
Sbjct: 160 GSDAGAASTTARLDGDHWVLNGAKMWITNGYEAEAAIVFARTDKAMKHKGISAFIVPKPY 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVS 326
            GL   + ++K+G ++ +T +L F +     +   N+        KI +  LD+  + ++
Sbjct: 220 EGLALGKKEDKLGIKATSTCQLMFEDCR---IPKENILGQEGMGFKIAMSTLDAGRIGIA 276

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G  + +A+     AI YA +R      +     ++  +AD+ + + +A  L+++ A   D
Sbjct: 277 GQALGIAQASIDCAIDYATKREAFNQPISRFQTIQTKLADMEVRVESARLLTWKAAMMKD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE---AMECIG 420
              + ++EAA  ++ A     +C   +         A + +G
Sbjct: 337 AGLNYTQEAAMGKLAASEAATYCSHQSTLDAGRIGIAGQALG 378



 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           LD+  + ++G  + +A+A     I YA +R      +     ++  +AD+ + + +A  L
Sbjct: 365 LDAGRIGIAGQALGIAQASIDCAIDYATKREAFNQPISRFQTIQTKLADMEVRVESARLL 424

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +++ A   D   + ++EAA  ++ A     +C         +A++ +GG GY+ +    R
Sbjct: 425 TWKAAMMKDAGLNYTQEAAMGKLAASEAATYCS-------HQAIQILGGMGYVTDMPAER 477

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
           HYR++    I  G+       +   + K
Sbjct: 478 HYRDARITEIYEGTSEIQKFVIAGQMLK 505


>gi|331700302|ref|YP_004336541.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954991|gb|AEA28688.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 619

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/536 (17%), Positives = 188/536 (35%), Gaps = 65/536 (12%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPG 90
            N +    +    +A    V    L  +   + +     LA     A+ N P    + P 
Sbjct: 27  FNLFEVFRVQEDALAADSEVDLDTLRGVLSELDTVATGPLAESFVDADRNPPV---FDPA 83

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
                 V    +     +                       + +  AA L L +   A  
Sbjct: 84  TH---SVTLPQSLKDAYKVLWDGEWWRLSLPAELGGYGIPPSVQWAAAELILGSNPVAFM 140

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            M+     AS++    T      WA  +  R +  T             + LTE   G+D
Sbjct: 141 YMAGP-NFASILHRNGTDEQK-HWAELMIGRGWGAT-------------MVLTEPDAGSD 185

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVP 259
           + A  ++  + +DG + + G K F++S   D       ++LA+ EG          FLVP
Sbjct: 186 VGAGRTKAIQQADGTWHIEGVKRFITSAEQDMTENIMHLVLARPEGAKAGTKGLSLFLVP 245

Query: 260 RLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPV 309
           +        E G  NG     +++K+G + + T EL F        G+LLGD++     +
Sbjct: 246 KFHFDSQTGEPGERNGAFVTGVEHKMGLKGSTTCELTFGQHGVPAVGWLLGDVHDGIAQM 305

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKR 357
             +     +     ++  +      A+ YA+ R                  +   P ++R
Sbjct: 306 FQVIEYARMMVGTKAIGTLSAGYLAALEYAKERVQGADLTQMLDKTAPRVTITHHPDVRR 365

Query: 358 AIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +           AL    A   D        +       ++ P+ K    + A  ++  
Sbjct: 366 ILMLQKAYAEGLRALYTYTATYQDRIRAGGDTALAEKVNDLLLPVVKGVGSERASEMLLL 425

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL 472
           +++ +GGSGY+++  I ++ R++  +S+  G+     LD++   ++         +   +
Sbjct: 426 SLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGTTAIQSLDLVFRKIVRDNGQALLHVAGEI 485

Query: 473 EQDLGSS-GKKVITILRDSIS-LCKEDKGLARFLTEKIALASSA-AALYRAGMNDI 525
           +  L +  G   +   R+ ++    + +G+    T  +  ++     LY+ G + +
Sbjct: 486 QAFLAADSGNGRLKEERELLARALGDVQGMLGAFTATLKGSAQDPTELYKVGQHSV 541


>gi|257057813|ref|YP_003135645.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256587685|gb|ACU98818.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 614

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 97/519 (18%), Positives = 183/519 (35%), Gaps = 101/519 (19%)

Query: 59  ELLGEYVLSCTAQELAR-------------------MANYNTPQLHAYGPGGERWDKVEF 99
           E LG+ VL+ + +E AR                    A+ N P    Y P   +      
Sbjct: 23  ERLGKGVLAESDEETARGVLSELNNLAVGPLAESFVDADRNPPV---YDP---KTFSATL 76

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
             ++    +                         +  A+ L L A       M+     A
Sbjct: 77  PESFKKSYQALWEGEWWRLGLPNHLGGFGLPPTVQWAASELILGANPALYMYMAGP-NFA 135

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++    T    + WA  +  R +  T             + LTE   G+D+ A  ++  
Sbjct: 136 MVIDRNGTEEQKR-WARIMIDRGWGAT-------------MVLTEPDAGSDVGAGRTKAV 181

Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLED 264
           K  DG + L G K F++S   D       ++LA+ EG           +  FLVP+ L D
Sbjct: 182 KQEDGSWHLEGVKRFITSGDQDMTENIMHLVLARPEGPGIEPKPGTKGLSLFLVPKFLFD 241

Query: 265 ------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKI 314
                 G  NG+    ++ K+G + + T EL F        G+LLG+++     +  +  
Sbjct: 242 TNTGELGERNGVFVTGVEEKMGLKVSTTCELTFGQHGTPAKGWLLGEVHDGIAQMFQVIE 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIADI 362
              +     +++ +      A+ YA+ R                  +   P ++R++   
Sbjct: 302 YARMMVGTKAIATLSTGYLNALEYAKERVQGPDLTRQTDKTAPRVTITHHPDVRRSLMMQ 361

Query: 363 ALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                   A+    A+  D       +A+S         ++ PI K    + A   + ++
Sbjct: 362 KAYAEGLRAVYLYTASFQDQVWTQEGDAESLDLAERVNDLLLPIVKGVGSERASEQLIQS 421

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
           ++ +GGSG++++  I ++ R+S  +S+  G+     +D               F  + +D
Sbjct: 422 LQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQSMDF-------------FFRKIVRD 468

Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
            G   K +  +  +     + + G  R   E+ AL   A
Sbjct: 469 KG---KALTYLAGEITKFIESESGNGRLKKER-ALLKQA 503


>gi|121608699|ref|YP_996506.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553339|gb|ABM57488.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 398

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 124/361 (34%), Gaps = 36/361 (9%)

Query: 108 RRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           R     GL        +  P +   A+ + A  +  +           S      +    
Sbjct: 56  REMGAMGLLGPTIPEQYGGPGLGYVAYGLIAREVERVDSGYRSMASVQSSLVMVPIHEFG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + + P + S              +     GLTE   G+D  A+ ++  K++ G  
Sbjct: 116 TEAQRQKYLPPLASG-------------AAIGCFGLTEPDHGSDPGAMATRAHKVAGGYR 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  +SP++D F++ A+     G    +   + +    GL    +  K+G R++ 
Sbjct: 163 LEGSKMWITNSPVADLFVVWAKEVSEAGAVGPIRGFVLEKGMPGLSAPAIHGKVGLRTSV 222

Query: 286 TVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH----- 337
           T E+     F        D+    GP         L+SA   ++   +  AE        
Sbjct: 223 TGEIVMDAVFVPEENAFPDVQGLKGP------FTCLNSARYGIAWGALGAAEFCWHRARQ 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R   G  L    ++++ +AD+  +IA       RL    DE  +       A    
Sbjct: 277 YTLERKQFGRPLAANQLVQKKLADMQTEIAIGLQACLRLGRMKDEGTA-------AVEAT 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   
Sbjct: 330 SIIKRNSCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRA 389

Query: 458 L 458
           +
Sbjct: 390 I 390


>gi|326343613|gb|EGD67375.1| Acyl-CoA dehydrogenase [Escherichia coli O157:H7 str. 1125]
          Length = 341

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 136/359 (37%), Gaps = 28/359 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +R    +G+        F  +     +  +   L  +++  A   +  +      +    
Sbjct: 1   MRALADNGISMLGVPEEFGGI--PADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFG 58

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    +             T ++ ++    A  L LTE   G+D  + T+   +  +G  
Sbjct: 59  SAEQLR------------KTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRK-NGKV 105

Query: 227 CLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K F++      + ++LA+  + +           D S  G+    L +KIG    
Sbjct: 106 YINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHML 164

Query: 285 ATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +T E+   N        +     G +  M    +  L +A  S      +  +A  YA +
Sbjct: 165 STCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQ 224

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    +++  +A +A+ I     +  ++A   D+ +S    AA A       K
Sbjct: 225 RIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA-------K 277

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +C + A  VI +A++ +GG GY +E  ++R +R+     I  G+   M+      + K
Sbjct: 278 LYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILK 336


>gi|254819539|ref|ZP_05224540.1| FadE15 [Mycobacterium intracellulare ATCC 13950]
          Length = 609

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/545 (17%), Positives = 188/545 (34%), Gaps = 72/545 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+  A  A+ N P+   + P       +         ++     G   
Sbjct: 42  LAEAARLAEGPVAESFA-FADRNPPE---FDPAEH---TISVPDELAKTVQAIKEAGWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
            +       +            + + A   A       +  A  + +       + WA +
Sbjct: 95  LMLAEEIGGMAAPPPLAWGVNEMIICANPSANFFCLGPLM-AQALYIEGN-EQQRHWAAE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +             A  + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 153 GVERGW-------------AATMVLTEPDAGSDVGAGRAKAFEQPDGTWHIEGVKRFISG 199

Query: 238 PMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                       ++LA+ EG       +  F VP  L D      GS NG+    L++K+
Sbjct: 200 GDVGDTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTFELGSRNGVFVTGLEHKM 259

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+GD++     +  +     +   + +   +      A
Sbjct: 260 GIKSSPTCELTFGATDVPAVGYLVGDVHRGIAQMFTVIEHARMTIGVKAAGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  +I  P ++R++           AL    A   D+A
Sbjct: 320 LAFAKERVQGADLTQMSDKTAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + PI K    + A  V+ E+++ +GGSG++ +  + ++ R+
Sbjct: 380 VAQRVSGADHDMAHRIDDLLLPIVKGVSSERAYEVLTESLQTLGGSGFLADYPLEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           S  +S+  G+     LD     ++       + L + +   +    + +  + +   +  
Sbjct: 440 SKIDSLYEGTTAIQALDFFFRKIVRDRGQALQFLTTQITATIDDCDEALKPVAQLLQTAY 499

Query: 495 KEDKGLARFLTEKIALASSA-AALYRAGMN------DIADVFLENRFLDNCHSTHCMLHG 547
            +   +   LT  +  A+     +Y+ G+        + D+ +  R L      H  L  
Sbjct: 500 DDVTAMTGALTGYLMSAAQQPTDIYKVGLASVRFLLAVGDLLIGWRLLVQAGVAHRALTD 559

Query: 548 RFNAA 552
               A
Sbjct: 560 GAAGA 564


>gi|299066778|emb|CBJ37972.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 622

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 89/512 (17%), Positives = 173/512 (33%), Gaps = 84/512 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHIIPEVKTALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP                 T   P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQ-------------IETFVQPELEGRFYGTMCLSEPQAGSSLSDIAT 178

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +   +      Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGVKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L       G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVGADGALGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQFRPKGPDGQPRAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------ 350
           +L+G+ +     +  M     +   + +          A+ YAR R   G  +       
Sbjct: 299 YLVGEPHRGLACMFHMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPIGPAGKDA 357

Query: 351 --------DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIM 396
                   D   ++R +      +  A  L+   A   DE +  ++  A A       I+
Sbjct: 358 ASPQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDADARATLGLLLDIL 417

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L 
Sbjct: 418 TPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLG 477

Query: 457 --LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--------DSISLCKEDKGLARFLTE 506
             ++ +    F  L   ++  +G +       L          + SL K  + L      
Sbjct: 478 RKVVMQDGAAFAALGRRVQATVGRALDSGDAALAGWGRALGMAAQSLAKVTQQLWAAGDP 537

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           ++ LA+++  L   G   +A ++LE       
Sbjct: 538 RVTLANASVYLEAFGHVVVAWIWLEQALAAAR 569


>gi|240171384|ref|ZP_04750043.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium kansasii ATCC 12478]
          Length = 609

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/544 (18%), Positives = 195/544 (35%), Gaps = 68/544 (12%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH-- 116
             L    +     E AR+A    P    +    +R   V F PA H     S+ D L   
Sbjct: 31  SELDADTVRTILAEAARLAE--GPVAETF-AYADRNPPV-FDPATH---SISVPDELVKT 83

Query: 117 --CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                    +   + ++   + A    + A  E  +  +PS +  ++      P + +  
Sbjct: 84  VQAIKDAEWWRLGLAEEIGGMPAPAPLVWAVNEMIYCANPSASFYNL-----GPTLSQSL 138

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             +    E      A   +      + LTE   G+D+ A  ++  +  DG + + G K F
Sbjct: 139 YVE--GDEQQRQWAAMGVERGWQATMVLTEPDAGSDVGAGRTKAVEQPDGTWHIEGVKRF 196

Query: 235 LSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLK 276
           +S             ++LA+ EG       +  F VP  L D      G  NG+    L+
Sbjct: 197 ISGGDVGDTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLE 256

Query: 277 NKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           +K+G +S+ T EL F        G+L+G ++     +  +     +   + S   +    
Sbjct: 257 HKMGLKSSPTCELTFGATDVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSTGTLSTGY 316

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YA+ R                  ++  P ++R++           AL    A   
Sbjct: 317 LNALAYAKERVQGADLTQMTDKTAPRVTIMRHPDIRRSLMTQKAYAEGLRALYLYAAAHQ 376

Query: 381 DEAKSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           D A ++    A    A      + P+ K    + A  V+ E+++ +GGSG++ +  I ++
Sbjct: 377 DNAVAQHVSGADPDMAHRVDDLLLPVVKGVGSERAYEVLTESLQTLGGSGFLTDYPIEQY 436

Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++  +S+  G+     LD     ++       + + + + Q + +  + +        
Sbjct: 437 IRDAKIDSLYEGTTAIQALDFFFRKIVRDHGKALQFVTAQITQTIDNIDEALKPQAALVQ 496

Query: 492 SLCKEDKGLARFLTEKIALASS-AAALYRAGMN------DIADVFLENRFLDNCHSTHCM 544
           +   E   +   LT  +  A+     +Y+ G+        + D+ +  R L      H  
Sbjct: 497 TALDEVTAMTGALTTYLMSAAQHPTDIYKVGLASVRYLLAVGDLIIGWRLLVQAGVAHAA 556

Query: 545 LHGR 548
           L   
Sbjct: 557 LANG 560


>gi|313903781|ref|ZP_07837170.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313465969|gb|EFR61494.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 388

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 116/377 (30%), Gaps = 42/377 (11%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G R+  +E H     L  ++   GL    W     P             L LM    +  
Sbjct: 38  GRRFPDLETH---RQLQLKAKEIGL----WGLMTPPEYGGAGFDYVTTCLILMETARSFV 90

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +    SA  +         K +               P           LTE   G+D
Sbjct: 91  PFTYG-GSADNILFACNEEQKKRYLI-------------PTINGERRSCFALTEPTAGSD 136

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268
              I     K     + L+G K F++    +D  I+ A  +   G    +   L D    
Sbjct: 137 ATNIRMTAVKDGRE-WVLNGEKIFITGGLEADFAIVFAVTDKEKGARGGITCFLVDREM- 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM----- 323
           G     +    G   +    L FS+        L       E    + ++ +  +     
Sbjct: 195 GWKSYPIATMGGW--SP-ARLVFSDVRVPEENVLGEVGRGFE--LAMQWIGNGRILIPAR 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V      L   I YAR+R   G  + +   ++  +AD A++I     L    A   D+ 
Sbjct: 250 AVGQAERLLQLGIDYARQRVAFGKPIGEYQAIQWMLADSAVEIQQVKWLVLHAAWKADQG 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K    EA+ A++           M   V    M+  GG GY  E  I R  R+     I 
Sbjct: 310 KDVRHEASMAKLA-------GANMIWRVADRVMQIHGGMGYTRELPIERVLRDVRVYRIY 362

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       +   L +
Sbjct: 363 EGTDEIQRRTIARNLLR 379


>gi|297198653|ref|ZP_06916050.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
 gi|197714601|gb|EDY58635.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 390

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 130/408 (31%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G        
Sbjct: 20  DLAIRATVRTWA--ADRVLPHVADWYEKGEL-------PGIRELARELGEIG--ALGMSL 68

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           S        A +   A L L A        +      +   +    +    + W P++ +
Sbjct: 69  SGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQTWLPRMAA 128

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V    GLTE   G+D  A+ +  +K            W  +  ++
Sbjct: 129 GE-------------VIGCFGLTEPDHGSDPGAMRTFAKKDGTDWVLNGRKMWITNGSVA 175

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              ++ AQ +  +  F+VP         G     +K+K   R++ T EL   +       
Sbjct: 176 GVAVVWAQTDDGIRGFVVPT-----DTAGFSAPEIKHKWSLRASVTSELVLDDVRLPADA 230

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L    G    +  L          ++   R     A+ YA+ R   G  +    + +  
Sbjct: 231 VLPEVVGLKGPLSCLSHARYGIVWGAMGAARSCFETAVDYAKTREQFGRPIGGFQLTQAK 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A   
Sbjct: 291 LADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIEICRTARTI 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 344 LGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKAFTGLDAFR 390


>gi|13542100|ref|NP_111788.1| isovaleryl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325531|dbj|BAB60434.1| isovaleryl-CoA dehydrogenase precursor [Thermoplasma volcanium
           GSS1]
          Length = 382

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 132/382 (34%), Gaps = 35/382 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + D+ ++ P    + +     G       + +        +  +A     +        +
Sbjct: 29  KIDREDYFPV--DVFKEMGKLGYLGVTIPQEYGGS--DAGYITQAVIEEELGYSSPSLAL 84

Query: 153 SPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           S    S      V    +  + + + PK+ S E+                L LTE   G+
Sbjct: 85  SYGAHSNLCLDNVYRNGSQAIREKFVPKLASGEW-------------IGSLCLTEPGSGS 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  A+ +        I+      +  + P +D F++ A+            ++   S  G
Sbjct: 132 DALAMHTTLHDHGGRIFLTGSKTFITNGPYADLFLVHAKDGDSYTS-----VIVLSSDKG 186

Query: 270 LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               +   K+G R + T EL F++       ++G        +        +  A + V 
Sbjct: 187 FERGKKFEKMGMRGSPTGELFFNDIDIGNERIVGKRGDGKRIIMSGLNSERVILAFIFVG 246

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L EA+ Y+  R      + +  +++  +A +      +  L++R     + ++  
Sbjct: 247 LARRALDEAVKYSSERKQFSLPISEFELIQEKLAYMYTKYETSRILAYRALEKLESSRDD 306

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              AA A + A        + A  +  EA++  GG GYI++  I    R++    I  G+
Sbjct: 307 PLYAAAAIMHA-------SESAEYIAREAIQIFGGYGYIKDTGIEMFLRDAILGQIGAGT 359

Query: 447 GNAMVLDVLNLLEKGTNLFEQL 468
                  +   L +   L E +
Sbjct: 360 TEIRKRIIAKSLIRKYKLGEDI 381


>gi|110635278|ref|YP_675486.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110286262|gb|ABG64321.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 388

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 131/376 (34%), Gaps = 34/376 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+    P W  +   +   GL+      ++  +    A  +    +   A    
Sbjct: 34  PNAAAYDESGDFP-WANVEAIN-ELGLNTIFLPEAYGGMPMSYALYLEIVSIISEACAST 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G + + +      +         +   P+I +                   L +TE   G
Sbjct: 92  GIIYATNFHGMKPLVEFGDDAQRERLLPRIAAGG--------------LGALAITEPSAG 137

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ-VEGRVGCFLVPRLLEDGS 266
           +D  ++ +      D I   +G K F+S+   +D +++  +  +       +  L+ +  
Sbjct: 138 SDATSMKTSFSPDGDEIVV-NGSKIFISNGDVADLYLLFGKWSQIEDPKKAISALILEKG 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSV 325
             G      + K+G+ +++T  L F N         N+   P + + IL   L+ +  SV
Sbjct: 197 AEGFEVVSKERKMGHNASSTCTLSFDNVRVP---RANLLKEPGDGLSILLASLNHSRPSV 253

Query: 326 SGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +     +A A       Y   R  SG  ++D    +  +AD+A ++A        +A+  
Sbjct: 254 AAHARGIARAAFRDMVSYGNDRVQSGRKILDFQGNQFTLADLACELAMLETWIDHVASLV 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D   S    AA       + K     +A  +  E ++  GG GY  +    R  R++   
Sbjct: 314 DSKVSDIGLAA------SVAKLRASDLAMKMAIECVQMHGGYGYCRDYRAERLMRDAKIT 367

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+       +  
Sbjct: 368 QIWEGTNQIHRQLIGR 383


>gi|114565939|ref|YP_753093.1| hypothetical protein Swol_0384 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336874|gb|ABI67722.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 612

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 90/449 (20%), Positives = 175/449 (38%), Gaps = 61/449 (13%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P++  L  +   +G   S  D+S + +V  +   +    L   A       +  +
Sbjct: 74  KVTTPPSFGPLFHQLQSEGWGTSNIDKSPDAMVMPEMLHMAVWELIGAANPTFMPYVLLT 133

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A ++      ++ + + PK+    +  T             + LTE   G+D+  I 
Sbjct: 134 TGAADLIQSFGDEKLKQMFLPKMMDGTWSGT-------------MCLTEPSAGSDVGDIL 180

Query: 216 SQGQKISD-GIYCLSGHKWFLSSPMSDA-----FIMLAQVEG-RVGCFLVPRLLEDG--- 265
           S+     D  I+ + G+K F+++  +D       + LA++EG R G   +   +      
Sbjct: 181 SKAYPTDDPRIFKIKGNKIFITAGDNDFTENIIHLYLARIEGARPGTGGISLFVVPKYWV 240

Query: 266 ------SPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLG-------DLNVSTGPV 309
                 S N      +++K+G   + T  L   E     G+LLG               +
Sbjct: 241 NEDGSLSDNDFQTTGVEHKMGQAGSVTAALAAGENDGCRGWLLGNDPREHEGKGQGMAQM 300

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GG-ILIDQPVMKRAIA 360
             M  L  +++  M++S +  +   A   A+ R           G   +I+   +KR + 
Sbjct: 301 FQMMNLARMETGHMALSCIINAFCNARDNAKERVQGRLLTNPKAGRVAIINHEDIKRTLL 360

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAE 414
                I A  A+ +R+  +FD+ +   +       +    I  P+ K +       +I+E
Sbjct: 361 MGKAHIEAMRAMLYRVYLAFDQRERDPDPEVRKAASDLIEITTPLCKAYPSDEGWWLISE 420

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472
           A++  GG GY EE  +A+  R+    SI  G+     +D++   +  KG +LF      +
Sbjct: 421 AIQSYGGYGYCEEYPVAQIARDMKIYSIWEGTNYIQSMDLVGRKMQMKGGSLFGAWVKEM 480

Query: 473 ----EQDLG-SSGKKVITILRDSISLCKE 496
               E + G ++  K   IL  ++   +E
Sbjct: 481 VDFCEANKGNAALSKEFAILDKALKAYQE 509


>gi|307609596|emb|CBW99098.1| hypothetical protein LPW_08831 [Legionella pneumophila 130b]
          Length = 567

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 174/413 (42%), Gaps = 29/413 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           + N P++  Y   G+R D+V  HPA+           L         + +++    K   
Sbjct: 71  DANLPKIEQYNAIGQRDDRVIHHPAYVRSGDIIYGSNL--------MQYLLKPGQMKKTL 122

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +   L +         P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 123 SLFLLSSHAGEAGHNCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------G 251
               LTE +GG+D+ A  ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E+ F     + +GD+       +E
Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGDVAEGIHLVME 296

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           ++  L  + ++   +   R +   A +YA+ R      +I+ P++K ++A I  +  A  
Sbjct: 297 NVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLAML 356

Query: 371 ALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+G 
Sbjct: 357 ASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGNGT 416

Query: 425 IEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           IE   S+ R  R+        G+   + +  L  + K   + E   + L+Q L
Sbjct: 417 IENFSSLPRLLRDCIVCENWEGTHFTLWMQTLRDMHK-FAIDELFIAHLQQLL 468


>gi|294811337|ref|ZP_06769980.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294323936|gb|EFG05579.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 420

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 129/396 (32%), Gaps = 46/396 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 39  PAAAEWDEREETP--WPVIQEAAKAGIYSLDFYAQQFFDPTGLGIPL--AMEELFWGDAG 94

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +  +A  V    T      W P+++        +    K         +E   
Sbjct: 95  IALSIVGTGLAAVGVLANGTEEQIGTWIPQMYG-------EPGDVK---VAAFCSSEPDA 144

Query: 208 GTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D+ A+ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 145 GSDVGAMRTRAVYREATDEWVIDGTKTWATNGGIAQVHVVVAVVDPELGVKGHASFVVPP 204

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP----------------V 309
              GL   +   K G R++ T E+            L                       
Sbjct: 205 GTPGLSQGQKFRKHGIRASHTAEVVLDGVRVPGHCLLGGKEKLDERLARARAARASGTSG 264

Query: 310 EDMKILIYLD-------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           E ++                M+V   R +   A+ YAR R   G  ++D   +   +AD+
Sbjct: 265 ERVRNAAMATFEASRHVVGAMAVGTARAAYETALDYARTRTQFGRPIVDNQGVAFQLADM 324

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I AA  L +R +      K  +           ++K +  + A  V A A++ +GG+
Sbjct: 325 RTRIDAARLLVWRASWMAATGKPFTAA------EGSMSKLYASETAKDVTARAIQILGGN 378

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  E  + R +R++   +I  G+     L +   L
Sbjct: 379 GYTREYPVERMHRDAAIYTIFEGTSEIQRLVIARTL 414


>gi|149913498|ref|ZP_01902031.1| phosphonates transport ATP-binding protein [Roseobacter sp.
           AzwK-3b]
 gi|149812618|gb|EDM72447.1| phosphonates transport ATP-binding protein [Roseobacter sp.
           AzwK-3b]
          Length = 553

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/487 (16%), Positives = 171/487 (35%), Gaps = 52/487 (10%)

Query: 3   LREIYRRLAMNQVHQPSDSLFALNQPPL--FIGMNAYSSDSLLVALIANFPSVVHKELEL 60
           + ++ +++A  +          +NQ  +     ++   SD  L+              + 
Sbjct: 86  VEQLTQQIAFGEYLSQLRGGIQMNQGEMVRLHDLDLTDSDIALLDTPEIQTLCRAGNTQA 145

Query: 61  LGEYVLSCTAQELARMANYNT---PQLHAYGPGGER--WDKVEFHP-AWH--------AL 106
               ++    +  A +   ++    +L        R   DKVE H   WH         +
Sbjct: 146 ARTRLVELMQERSAELTVGHSGLDDELEMIREQFRRFSVDKVEPHAHEWHLKDELIPMEI 205

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +      G+        +      +A     +       +  G L + S  +A ++    
Sbjct: 206 IEELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELIIAGG 265

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P++ S E  PT                TE   G+D+ ++ ++  K  +G +
Sbjct: 266 TEEQKQKWLPRLASAETLPTAV-------------FTEPNTGSDLGSLRTRAVKDENGDW 312

Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQRL 275
            ++G+K +++    +    +LA+          +   L + +P          G+    +
Sbjct: 313 KITGNKTWITHASRTHVMTLLARTIPDTTDHRGLSMFLAEKTPGTDEAPFPTEGMTGGEI 372

Query: 276 KNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  +G R     EL F N    G   L G+       + +      + +A  ++   + +
Sbjct: 373 E-VLGYRGMKEYELAFDNFDVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQSA 431

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   + YA  R   G  LI  P +   +A +A++I  A  L++  A   D       EA 
Sbjct: 432 LDVGMRYAIDRKQFGKSLIAFPRVSGKLAMMAVEIMVARQLTYFSAWEKDNGNRCDLEAG 491

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+++         ++A +     ++  GG+G+  E  I+R   ++   +I  G+     
Sbjct: 492 MAKLL-------GARVAWSAADNGLQIHGGNGFALEYGISRILCDARILNIFEGAAEIQA 544

Query: 452 LDVLNLL 458
             +   L
Sbjct: 545 QVIARRL 551


>gi|307178292|gb|EFN67064.1| Glutaryl-CoA dehydrogenase, mitochondrial [Camponotus floridanus]
          Length = 370

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 124/361 (34%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R     G+            V   A+ + A  +  +       L   S  S   + 
Sbjct: 28  REIIREMGQIGVLGCTLKGYGAAGVSSIAYGLLAKEIESIDSGYRSALSVQSSLSCGAIY 87

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +  T    + + PK+ S E             +    GLTE   G+D+ ++ ++    SD
Sbjct: 88  MHGTDSQKERFLPKLVSGE-------------IIGCFGLTEPNHGSDVESMETRATYDSD 134

Query: 224 G--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG--LCYQRLKNKI 279
                      W  ++P++D  I+ A+ +           + D    G  L   +++ K+
Sbjct: 135 KKTYKLNGSKTWITNAPIADILIVWAKCDDNQFRG----FIVDRKAAGDRLSTPKIEGKL 190

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             R++ T  +   N        LNV    GP   +    Y   A  S+      L  A  
Sbjct: 191 SLRTSITGMILMDNVIVPEENVLNVQGLKGPFSCLNNAKY-GIAWGSLGAAETCLKIARS 249

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R      L    ++++ +AD+  DIA       R+    DE ++  E       M 
Sbjct: 250 YTLERRQFNKPLAANQLIQKKLADMISDIAIGLQACLRIGRLIDENRAVPE-------MI 302

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K      A  +   A + +GG+G  +E  + RH       +   G+ +   L +   
Sbjct: 303 SVIKRNSSGKALEIARAARDMLGGNGISDEYHVIRHMVNLETVNTYEGTSDIHALILGRA 362

Query: 458 L 458
           +
Sbjct: 363 I 363


>gi|134102148|ref|YP_001107809.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007600|ref|ZP_06565573.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914771|emb|CAM04884.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 392

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 114/364 (31%), Gaps = 39/364 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L +++   G         +  +              +  +L    +       A  +   
Sbjct: 51  LQQKAKQAGFWGVQTPEEYGGMGLSAVMTA-----LIEVELGRTFVPFRFGGYADNILYH 105

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                 + +     S E                   +TE   G+D   I +  +K  D  
Sbjct: 106 ANEEQKQRYLLPTISGERK-------------SCFAITEPGAGSDAKNIRTTARKDGDE- 151

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           + ++G K F++    +D  ++ A  +   G    V   L D    G   + ++  +G R 
Sbjct: 152 WVINGEKTFITGGIDADFAMVFAVTDKEKGAAGGVTCFLVDRDM-GWKSEPIEI-MGERE 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIM-----SVSGMRVSLAEAIH 337
                L F         D N+     +     + ++          ++      L   + 
Sbjct: 210 RQPAALVFDGVRVP---DANILGEQGKGFALAMQWIGRGRYLLPARALGNCERLLEMGMD 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YAR R   G  + ++  ++  IAD A++I A   L  + A   D+               
Sbjct: 267 YARSRETFGEPIAERQAVQWMIADSAVEIEALRWLVLQAAWQVDQGMDSRHAQ------- 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K +    A  ++   M+  GG GY  E  + R YR+     I  G+       +   
Sbjct: 320 SIAKLYGGVRANEIVDRVMQIHGGMGYTRELPVERWYRDLRLLRIFEGTDEIQRRTIARN 379

Query: 458 LEKG 461
           L KG
Sbjct: 380 LLKG 383


>gi|115351286|ref|YP_773125.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115281274|gb|ABI86791.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 609

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 101/577 (17%), Positives = 197/577 (34%), Gaps = 94/577 (16%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +   +D+L    +  +     +  + +    E + +      A   +   P+       
Sbjct: 15  YDWLDADAL--GALPRYAEHSRETFDAVLDTSERIAADLFAPHAARGDREEPRF-----D 67

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GER   +   P     +R     GL  +  D +F  +   +  +  +   +  A +    
Sbjct: 68  GERVTLI---PEVEPAVRAFAAAGLIAAGQDEAFGGMRLPKLVEAASFLFFQAANIATAA 124

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +V +A+++    +P     +A              P  +      + L+E + G+ 
Sbjct: 125 YPFLTVANANLLLAHGSPAQIDAFA-------------RPELEGRFFGTMCLSEPQAGSS 171

Query: 211 IAAITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--------- 252
           ++ I ++            Y ++G+K ++S    +       ++LA++            
Sbjct: 172 LSDIVTRADFECASPLGPRYRITGNKMWISGGEHELAENIVHLVLAKIPDEQGRLLPGTR 231

Query: 253 -VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NT 294
            +  F+VPR L        G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPRYLPTDDGAARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGA 291

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------- 345
            G+L+G+ N     +  M     +     +V+        A+ YAR R            
Sbjct: 292 IGYLVGEPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRALGPAGKD 351

Query: 346 ----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARI 395
                  ++  P ++R +      +    AL    A   DEA++      R E A    I
Sbjct: 352 AAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHDDAALRVEAAQLLDI 411

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     LD+L
Sbjct: 412 LTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQALDLL 471

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE--------- 506
               K       L  TL+  +G++ ++      D  S           L E         
Sbjct: 472 G--RKVGQDDGALLRTLDARIGATLQRARAADGDPHSHADALARRWARLVELTRALAALD 529

Query: 507 --KIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
             ++ LA+++  L   G   +A ++L+     + H +
Sbjct: 530 DPQVRLANASVYLEAFGHLVVAWLWLDVTLAAHGHDS 566


>gi|107022415|ref|YP_620742.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116689363|ref|YP_834986.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892604|gb|ABF75769.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647452|gb|ABK08093.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 609

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 96/563 (17%), Positives = 188/563 (33%), Gaps = 93/563 (16%)

Query: 37  YSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           +     LVAL   +     +  + +    E +        A   +   P+       GER
Sbjct: 17  WLDAEALVALPR-YAEHSRETFDAVLDTSERIAEDLFAPHAARGDREEPRF-----DGER 70

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
              +   P     +R     GL  +  D +   +   +  +  +   +  A +       
Sbjct: 71  VTLI---PEVEPAVRAFADAGLIAAGHDEALGGMRLPKLVEAASFLFFQAANIATAAYPF 127

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +V +A+++    +      +A              P  +      + L+E + G+ ++ 
Sbjct: 128 LTVANANLLVAHGSAAQIDAFA-------------RPELEGRFLGTMCLSEPQAGSSLSD 174

Query: 214 ITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG---------- 254
           I ++            Y L+G+K ++S    +       ++LA++    G          
Sbjct: 175 IATRADFEGASPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDEHGRLQPGTRGIS 234

Query: 255 CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGF 297
            F+VP+ L        G  N +    L +K+G R      L F               G+
Sbjct: 235 LFIVPKFLTGTDGDASGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRYRPEGRAGAIGY 294

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------- 348
           L+G  N     +  M     +     +V+        A+ YAR R   G           
Sbjct: 295 LVGQPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQ-GRPLGPAAKDAA 353

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMA 397
                ++D P ++R +      +    AL    A   DEA++  +  A A       I+ 
Sbjct: 354 APQAPIVDHPDVRRMLLAQKAYVEGGLALILYCAKLVDEARAHGDATARAEATRLLDILT 413

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           PI K W  +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L  
Sbjct: 414 PIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLGR 473

Query: 458 L--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI------- 508
              +        L + +   +    + +    R+      +       +T ++       
Sbjct: 474 KVTQDDGASLRALDARIGATV-ERARALDAGTREQADALAQRWARLCDVTHQLNAIGDPR 532

Query: 509 -ALASSAAALYRAGMNDIADVFL 530
             LA+++  L   G   +A ++L
Sbjct: 533 TRLANASVYLEAFGHLVVAWLWL 555


>gi|269218042|ref|ZP_06161896.1| acyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212977|gb|EEZ79317.1| acyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 381

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 125/377 (33%), Gaps = 31/377 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                 D+    P      R     G         +                     +  
Sbjct: 27  AYVAETDREHRQPV--EFKRAMQEAGFLSLGIPEEYGGTP---------------VDMVT 69

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+   V S  +     T  +      +  S E   +    +Q   V   L  TE + G
Sbjct: 70  MCLIGERVASRGLNLGYATEILQVLDILEFGSPEQRESVLGILQDGGVPFALAFTEPQAG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           +D +A+ +  +   DG    +G K  +++ +   +++   V  +       +   L    
Sbjct: 130 SDSSAMKTTAE-HRDGKVRFNGTKTLITNAVDTKYLLTMAVNPDAEDPRRAISMYLVPTD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIM 323
             G+    + +K+   +  + E+ +++        + V   G  + MK   L  + +A  
Sbjct: 189 APGIEISPI-SKMCWHTADSSEIYYNDVEVDESCLVGVKGEGFKQLMKNFELERIMTATQ 247

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+     +  +A  YA  R   G  +    +++  + D+A+ I       +  A+  D  
Sbjct: 248 SLGLAEAAFKDAAEYAATRVQFGKPIGSFQLVQEKLTDMAIKIENMKNFIYHSASMVDNG 307

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               ++AA  +    +        A  V  +A++  GG G  E   I R +R++  +   
Sbjct: 308 TLDRKQAAMCKRYCSMA-------AFEVCDDALQIHGGIGVTEGVRIERLWRDARGHRFG 360

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+   MV  V   + K
Sbjct: 361 GGTDEIMVHVVGRQIVK 377


>gi|300245815|gb|ADJ93965.1| putative acyl-CoA dehydrogenase [Clostridia bacterium enrichment
           culture clone BF]
          Length = 385

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 112/313 (35%), Gaps = 16/313 (5%)

Query: 154 PSVTSASMVALMTTPRVHKDWAP-----KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            S   A + A    P   ++  P     K  ++E                   +TE   G
Sbjct: 72  ISEELAKVNASWRLPINMQNLGPSLTVNKFGTQEQKEKYIPGWVGGEKLGFFAITEANSG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           +D+ ++ +      D         W   +   D  ++ A  +       V   + +    
Sbjct: 132 SDVISMKTTAADKGDHWEINGSKMWISQAAQGDYGLLYAVTDREAKYKGVSAFIINLKET 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDM--KILIYLDSAIMS 324
            G+  + +  K+G  ++ T E+ F          L NV  G    M       L  A  +
Sbjct: 192 AGVTTRDITTKMGLANSPTGEIAFDGAKIPKDALLGNVGDGFQICMWQLNNTRLSCAAGA 251

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     SL  +I YA  R   G  +    +++ +IA++A +  AA  L +R A   D+  
Sbjct: 252 LGVAGASLKASIEYANERTQFGKKIGTFQMIQASIAEMAAEHEAAQLLVYRAAWLKDKGL 311

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + E         + KY+  + A     EAM+  G  GY  E  + R+ R++ +  ++ 
Sbjct: 312 PNTYE-------TSMAKYFAAESAVHCANEAMKIHGSYGYSSEYPVERYLRDAKSYQVVE 364

Query: 445 GSGNAMVLDVLNL 457
           G+ N     +  +
Sbjct: 365 GTSNIQKTIIAGI 377


>gi|254777205|ref|ZP_05218721.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 398

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 117/368 (31%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                 + +    L          +      +   + 
Sbjct: 60  RELAREFGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIW 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E             +    GLTE   G+D AA+ ++ ++   
Sbjct: 120 NFGSEEQKRQWLPGMATGE-------------LLGCFGLTEPDVGSDPAAMKTRARRDGS 166

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A  +  +  FLVP         G     + +K+  R+
Sbjct: 167 DWVLDGRKLWITNGSVADVAVVWAGTDDGIRGFLVPT-----DTPGFTANTIHHKLSLRA 221

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +     L D  +  G       L  L  A   +        R +   A+ Y
Sbjct: 222 SITSELVLDDVR---LPDEAMLPGATGLRGPLSCLSEARYGIIWGAMGAARSAWQAALDY 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    + +  + D+A+++     LS  L    D    R E+ ++      
Sbjct: 279 ATQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDSTGLRPEQVSFG----- 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL   
Sbjct: 334 --KLNNTREAIEICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQA 390

Query: 459 EKGTNLFE 466
             G + F 
Sbjct: 391 FTGADAFR 398


>gi|164426463|ref|XP_961222.2| hypothetical protein NCU04231 [Neurospora crassa OR74A]
 gi|157071346|gb|EAA31986.2| predicted protein [Neurospora crassa OR74A]
          Length = 697

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 115/616 (18%), Positives = 207/616 (33%), Gaps = 131/616 (21%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           +++ F   QP   I  N +  D  L  +   +        V  E+  LG+ VLS    + 
Sbjct: 6   ANTGFIQQQP---IIKNQFHEDVSLQRIAKLYLPPSLLEKVTPEISRLGDAVLSQQIFDW 62

Query: 74  ARMANYNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RK 130
              A  NTP L        G    ++     W  L      +G+    +D +  P     
Sbjct: 63  ITDAERNTPYLRGSGRDAFGRPKQELIVTEGWRKLQEFGFANGVVAINYDSTSSPSPNGP 122

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWAPKIFS--REYDP 185
            +  I+  R +L     A  +   ++   +   L    TTP +  + +    S  +    
Sbjct: 123 YSRLIQFIRCHLWEASCANTMCPAAMQDGAARLLQRHLTTPPLAANLSETERSVFQNAYD 182

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----------------KISD---GIY 226
              +     +   G  +TE+ GG+D++   +                   K  +   G +
Sbjct: 183 HLTSRDPAYTWTSGQWMTERTGGSDVSQTETVATYSPFPAGRQQPVPLACKEENMPLGPW 242

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP------------------- 267
            +SG KWF S+  S   I+LA+    +G   V                            
Sbjct: 243 SISGFKWFSSATDSQMTILLAKTRPGMG---VSAFFAPMRRWNPELVSPTCTGPGATGGT 299

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+   RLK+K G  S  T ELE  +  G+L+G        +  +  +    + + S+
Sbjct: 300 ELNGVTISRLKSKFGTVSLPTAELELKDMRGWLIGKEGEGIKEISTILNITRAHTTVSSM 359

Query: 326 SGMRVSLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +   +  A  YA  R  +G        L   P+  R +AD+  +      L+F     
Sbjct: 360 GYLGRGIGVAKAYALVREAAGVGKGRRLPLYKHPLHMRTLADLTAEYHGLMLLTFYTLYI 419

Query: 380 --FDEAKSRSEEAA--------------------------------------YARIMAPI 399
              DE  S    ++                                        R ++ +
Sbjct: 420 LGLDEHLSSPSMSSPSMSSPSVSSPSLSSPISPPPPLHPLTPPTTDPNLVPPLLRTLSSL 479

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGY-----IEERSIARHYRESPANSILLGSGNAMVLDV 454
            K + C     +    ME +GG GY      E  +++R +R++   +I  G+ + +  D 
Sbjct: 480 HKSFVCHTTIPLSFSCMESLGGVGYLLNSDSEHLNLSRLFRDACVGAIWEGTTDVLASDT 539

Query: 455 LNLLEK-------------------GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           L  L++                   GT+  E+     ++  G   +K    L+  I   K
Sbjct: 540 LRALKQPAVEALGWLVETGLAASLEGTDQKEKEEGKEQKAEGERIRKCWDGLKRRIEKGK 599

Query: 496 EDKGL--ARFLTEKIA 509
           +++ +  AR LT ++A
Sbjct: 600 KEELVSGARGLTHRLA 615


>gi|146760115|emb|CAJ77661.1| acyl-CoA dehydrogenase [Mycobacterium chelonae]
          Length = 611

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/548 (18%), Positives = 194/548 (35%), Gaps = 83/548 (15%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--------MANYNTPQLH 85
            N +     L  +   F    + EL+           + LA           + N P   
Sbjct: 13  FNLFE----LFNIQQVFGGEEYPELDEETARTFLSEMRTLAEGPLADSFAEGDRNPPV-- 66

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            + P       V    A+   ++     G      I +    PV R       A +  ++
Sbjct: 67  -FDPETH---SVAIPEAFKKSVKAVTDAGWDRLGLIEELGGSPVPRSLMW---AIQEMIL 119

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A  + S     A +   + T    K WA     R +  T             + LT
Sbjct: 120 GANPAVWMYSGGAGFAQIFYNVATDEQKK-WAEFAAERGWGAT-------------MVLT 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------ 251
           E   G+D+ A  ++  K  DG + + G K F++S  SD        ++LA+ EG      
Sbjct: 166 EPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPGTK 225

Query: 252 RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD 301
            +  F VP+ +      E G  NG+    +++K+G + +AT EL          G+L+G+
Sbjct: 226 GLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLVGE 285

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------IL 349
           ++     + D+     +     +++ +      A+ YA+ R                  +
Sbjct: 286 VHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTRVQGADMTQLTDKTAPRVTI 345

Query: 350 IDQPVMKRAIADIALDIAAATALSFRL-------ANSFDEAKSRSEEAAYARIMAPITKY 402
              P ++R++           AL           A          E      ++ PI K 
Sbjct: 346 THHPDVRRSLMTQKAYAEGLRALYLYATTFQDAVAAKAINGVEAEEAVRLNDLLLPIIKG 405

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
              + A   + E+++  GGSG++++  I ++ R++  +S+  G+      D     +++ 
Sbjct: 406 VGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVKD 465

Query: 461 GTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKIALASSA-AAL 517
                  +   +E+ + S +G   +   R  ++   ED +G+A  +T  +  A      +
Sbjct: 466 QGKSLAFVSGQIEEFVKSETGNGRLKAERALLATALEDVQGMAATMTANLMAAQQEITQV 525

Query: 518 YRAGMNDI 525
           Y+ G   +
Sbjct: 526 YKVGTASV 533


>gi|254437033|ref|ZP_05050527.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198252479|gb|EDY76793.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 560

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 127/361 (35%), Gaps = 35/361 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +      +      +       +  G L + S  +A ++    T    
Sbjct: 220 EMGVFGLTIPEEYGGFGLSKVSMCVVSEELSRGYIGVGSLGTRSEIAAELILAGGTEEQK 279

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P + S +  PT                TE   G+D+ ++ ++  K  D        
Sbjct: 280 QKWLPALASAQKLPTAV-------------FTEPNTGSDLGSLRTRAVKDGDDYRVTGNK 326

Query: 232 KWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN---------GLCYQRLKNKIGN 281
            W   +  +    +LA+          +   L + +P          G+    ++  +G 
Sbjct: 327 TWITHASRTHVMTLLARTNPDSSDYKGLSMFLAEKTPGDCAHPFPTDGMTGGEIE-VLGY 385

Query: 282 RSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           R     EL F N        L G+       + +      + +A  ++     +L  A+ 
Sbjct: 386 RGMKEYELAFDNFHVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVASSALDVAMQ 445

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  LI+ P +   +A +A++I  A  L++  A   DE +    EA  A+++ 
Sbjct: 446 YAQDRKQFGKSLIEFPRVANKLAMMAVEIMIARQLTYFSAFEKDEGRRCDVEAGMAKLL- 504

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   ++A A    A++  GG+G+  E  ++R   ++   +I  G+       +   
Sbjct: 505 ------GARIAWAAADNALQIHGGNGFALEYKVSRILCDARILNIFEGAAEIQAQVIARR 558

Query: 458 L 458
           +
Sbjct: 559 I 559


>gi|148555167|ref|YP_001262749.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148500357|gb|ABQ68611.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 386

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 137/361 (37%), Gaps = 23/361 (6%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSA 159
           P  H L+RR    G            +       +     +  ++   A  +   SV   
Sbjct: 37  PPSHELVRRYAEMGFLGINVPAELGGLGLGNLEALVVLEEFAKISSAVAFPIFESSVGPV 96

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    +  + +   P              + K  + + +G++E   G+ +  + ++G 
Sbjct: 97  RAIEHFGSDSLKRRIVP-------------AVCKGEMVVAIGMSEPDAGSALTDLKTKGV 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
              D +      +W      +DA+++  ++    G   +  +L +    G  +   +  +
Sbjct: 144 VKGDRLVINGTKRWCSGGGHADAYLVYCRLSDDPGPRAIGAVLVEKGTPGFGFGPNEQLM 203

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIH 337
           G R   + +L F +    L   +  + G  + M+   L    +A M++     +L +   
Sbjct: 204 GFRGVPSADLTFDDVEVPLDNIVVPAGGFKKLMETFDLERCGNATMALGQASGALEDVTD 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R   G  +++   ++  +A++ + + AA  L +R A + ++      +++ A+  A
Sbjct: 264 YVQERRQFGKPIVEFQAVQLKLAEMHMKVDAARLLIWRAAANAEDGLPSILDSSTAKCFA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                    +A  V  +A++ +G  GY ++  + R  R+S    I  G+ +   +++   
Sbjct: 324 NS-------IAREVAGDAVQLMGAYGYSKDFPMERRLRDSWGWGIAGGAIDIQKVNIAAA 376

Query: 458 L 458
           +
Sbjct: 377 M 377


>gi|259418115|ref|ZP_05742034.1| isobutyryl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
 gi|259347021|gb|EEW58835.1| isobutyryl-CoA dehydrogenase [Silicibacter sp. TrichCH4B]
          Length = 565

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 138/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A     +       +  G L + S  +A ++  
Sbjct: 216 EVIEELAEMGVFGLTIPEEFGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELILA 275

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T     +W PKI S E  PT                TE   G+D+ ++ ++  K  +G
Sbjct: 276 GGTDAQKANWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDDNG 322

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN---------GLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 323 DYKITGNKTWITHAARTHVMTLLARTDPETTNHRGLSMFLAEKTPGTEDNPFPTDGMTGG 382

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G+       + +      + +A  ++   +
Sbjct: 383 EIE-VLGYRGMKEYELGFDGFHVKSENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQ 441

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI+ P +   +A +A+++  A  L++  A   D       E
Sbjct: 442 SALDIAMQYAQDRKQFGKALINFPRVSSKLAMMAVEVMVARQLTYFSAWEKDNGHRCDLE 501

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 502 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 554

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 555 QAQVIARRL 563


>gi|170750740|ref|YP_001757000.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657262|gb|ACB26317.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 560

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 145/369 (39%), Gaps = 37/369 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++++    G+        +  +   +      +     A +  G L + S  +A ++  
Sbjct: 210 EIVQKMAELGVFGLTIPEEYGGMGLPKTAMCVVSEELSRAYIGVGSLGTRSEIAAELILC 269

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PKI S +  PT                TE   G+D+A++ ++  K  D 
Sbjct: 270 GGTEEQKQRFLPKIASGDILPTAV-------------FTEPNTGSDLASLRTRAVKEGD- 315

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSPN---------GLCYQ 273
           ++ ++G+K +++ P+ +D   +L + +    G   +  L+ +             GL   
Sbjct: 316 VWKITGNKTWITHPVRADIMTVLVRTKPEEKGHKGLSMLIAEKPRGTDEDPFPVQGLSGG 375

Query: 274 RLKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            ++  +G R     EL F      G  L       G  + M+      + +A  ++   +
Sbjct: 376 EIE-VLGYRGMKEYELAFEGFAVPGDNLLGEVEGKGFAQLMQTFESARIQTAARAIGVAQ 434

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    E
Sbjct: 435 SALDVGLRYAEERVQFGKALVNFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLE 494

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A    A++  GG+G+  E  ++R   ++   SI  G+   
Sbjct: 495 AGMAKLL-------GARVAWAAADNALQIHGGNGFALEYPVSRILCDARILSIFEGAAEI 547

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 548 QAQVIARRL 556


>gi|228921920|ref|ZP_04085232.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229070975|ref|ZP_04204202.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185]
 gi|228712157|gb|EEL64105.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185]
 gi|228837752|gb|EEM83081.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 347

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 137/351 (39%), Gaps = 31/351 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVAL 164
           +++     G+  +   + +  +        R   +   A      L++  V+     +  
Sbjct: 1   MIQEISSYGVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESIKR 60

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P+             M K ++     LTE   G+D  A+ +  ++++D 
Sbjct: 61  WGTEEQKRKWLPE-------------MAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH 107

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW   + ++D F++ A  EG+     V   + + S  G+   ++   + + S+
Sbjct: 108 FILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKLLASNSS 162

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
              E+   +        L    G    +     LD    S++   V++A+      + Y+
Sbjct: 163 HIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVAYS 221

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           RRR      + +   ++  +A+ +++I AA +L           K R +    A I   I
Sbjct: 222 RRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDAVIETTI 275

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 276 AKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326


>gi|296271318|ref|YP_003653950.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296094105|gb|ADG90057.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 385

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/407 (16%), Positives = 137/407 (33%), Gaps = 47/407 (11%)

Query: 70  AQELARMANYNTPQLHAYGPGGER------------WDKVEFHPAWHALLRRSIHDGLHC 117
            ++L  + +  TP+         R            W +    P    L       GL  
Sbjct: 1   MEDLLELDDQLTPEHRMIRDTVRRFVSERVLPHVGEWFERGVFPG-RELAPELGSLGLLG 59

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +      +   ++ +    L          +      +   +    +    ++W P+
Sbjct: 60  MHLEGYGCAGLDAISYGVACRELEAGDSGLRSFVSVQGSLAMFPIWKYGSEEQKQEWLPR 119

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + S E                  GLTE   G+D  ++ +  ++   G + L+G K ++++
Sbjct: 120 LASGE-------------AIGCFGLTEPDHGSDPGSMRTYAKQDPSGDWILNGSKMWITN 166

Query: 238 P-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++D  ++ AQ +  +  F+VP      S  G   Q +  K+  R++ T  L F +   
Sbjct: 167 GSIADVAVVWAQTDSGIRGFIVPA-----STPGFSAQEIHRKLSLRASVTSSLHFDDVRL 221

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILID 351
                L   TG       L  L  A   +        R  L  A+ YAR R   G  +  
Sbjct: 222 PASAVLPGVTGLK---GPLSCLTEARYGILWGVVGAARACLEAAVDYARTRIQFGKPIGA 278

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + +R +A +A+ +  A   +  L    +  + +  + ++ ++          + A  +
Sbjct: 279 FQLTQRKLAWMAVALGQAGLTALHLGRLKEAGRLKPRQVSFGKLA-------NVRAALDI 331

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             EA   +G +G   E  + RH     +     G+     L +   L
Sbjct: 332 AREARSILGANGITLEYPVIRHMTNLESVLTYEGTEEVHTLVLGEAL 378


>gi|88811721|ref|ZP_01126975.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88791112|gb|EAR22225.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 390

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 145/402 (36%), Gaps = 45/402 (11%)

Query: 73  LARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           +AR A  +Y   +L        R ++ +       ++R     GL        +      
Sbjct: 23  MARDAARDYAQQRLMPRILDANRHERFD-----REIMREMGTLGLLGPTLPEQYGGAGAN 77

Query: 131 QA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
              + + A  L  +       L   S      +A   +P+    + P++ S ++      
Sbjct: 78  HVCYGLIARELERVDSSYRSALSVQSSLVMFPIATFGSPQQRSKYLPRLASGDW------ 131

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                      GLTE   G+D   +TS  QK+  G        W   SP++D  ++ A++
Sbjct: 132 -------VGCFGLTEPDHGSDPGGMTSHAQKVRGGYRVSGAKSWITHSPIADVLVIWAKL 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +G +  F++ R        GL   +++ K   R++ T ++     F      L      V
Sbjct: 185 DGEIRGFILER-----DMTGLETPKIEGKFALRASVTGQIHMDEVFVPEANAL-----LV 234

Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSGGILIDQPVMKRAIADIA 363
           E +K     L  A   +    +  AE    A RR+       G  L    ++++ +AD+ 
Sbjct: 235 EGLKGPFSCLSKARYGIIWGSMGAAEFCWQAARRYSLERTQFGRPLAANQLIQKKLADMQ 294

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I      + RL    D  +       +A  M  + K   C  A  +   A +  GG+G
Sbjct: 295 TEITLGLQAALRLGRLIDADR-------WAPEMVSLLKRNNCGKALEIARTARDIHGGNG 347

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            ++E  + RH     A +   G+ +   L +L   + G   F
Sbjct: 348 IVDEYHVIRHMLNLEAVNTYEGTHDIHAL-ILGRAQTGIPAF 388


>gi|148360550|ref|YP_001251757.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila
           str. Corby]
 gi|296106385|ref|YP_003618085.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282323|gb|ABQ56411.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila str. Corby]
 gi|295648286|gb|ADG24133.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 567

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 174/413 (42%), Gaps = 29/413 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           + N P++  Y   G+R D+V  HPA+           L         + +++    K   
Sbjct: 71  DANLPKIEQYNAIGKRDDRVIHHPAYVRSGDIIYGSNL--------MQYLLKPGQMKKTL 122

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +   L +         P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 123 SLFLLSSHAGEAGHNCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------G 251
               LTE +GG+D+ A  ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E+ F     + +GD+       +E
Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGDVAEGIHLVME 296

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           ++  L  + ++   +   R +   A +YA+ R      +I+ P++K ++A I  +  A  
Sbjct: 297 NVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLAML 356

Query: 371 ALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+G 
Sbjct: 357 ASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGNGT 416

Query: 425 IEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           IE   S+ R  R+        G+   + +  L  + K   + E   + L+Q L
Sbjct: 417 IENFSSLPRLLRDCIVCENWEGTHFTLWMQTLRDMHK-FAIDELFIAHLQQLL 468


>gi|194383082|dbj|BAG59097.1| unnamed protein product [Homo sapiens]
          Length = 394

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 78  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 125 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 185 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 238 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 298 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 351 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 384


>gi|326385218|ref|ZP_08206884.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196077|gb|EGD53285.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 608

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/518 (18%), Positives = 189/518 (36%), Gaps = 71/518 (13%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYV---LSCTAQELARMANYNTPQLHAYGPGGER 93
           Y  D +L      F  + H+    +   V         +    A+ N P    + P    
Sbjct: 19  YELDKVL--ATGEFGDLDHETAVDMLREVRTLAEGPIADSFTDADRNPPV---FDPENH- 72

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
              V    ++ A     I  G      D +   +   ++    A    ++       + +
Sbjct: 73  --TVTIPESFKASYNAFIEAGWDKVGVDEALGGLPAPRS-LYWAIGEMILGANPPIFMYA 129

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                +++     T    K WA     R +  T             + LTE   G+D+ A
Sbjct: 130 AGSGFSNIFYDNGTDEQKK-WAAICAERGWGAT-------------MVLTEPDAGSDVGA 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL 262
            T++  +  DG + + G K F++S   D       ++LA+ EG       +  F VP+  
Sbjct: 176 GTTKATQQEDGTWHIEGVKRFITSADQDMTENIFHLVLARPEGAGPGTKGLSLFFVPKFH 235

Query: 263 ED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDM 312
            D      G  NG     +++K+G +++AT E+ F        G+L+G+++     + D+
Sbjct: 236 FDHETGELGDRNGAFVTGVEHKMGIKASATCEVSFGLHGTPAKGWLVGEVHKGIAQMFDV 295

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIA 360
                +     ++S +      A+ YA+ R                  +   P ++RA+ 
Sbjct: 296 IEHARMMVGTKAISTLSTGYLNALEYAKERVQGADLTQMMDKAAPRVTITHHPDVRRALL 355

Query: 361 DIALDIAAATALSFRLANSFDEAKSR---SEEAAYARI----MAPITKYWCCKMAPAVIA 413
                     A+    A+  D A ++     +A  A      + PI K    + A   + 
Sbjct: 356 TQKAYAEGLRAVYLYTASHQDPAAAQIVSGADAEMAHKVNDLLLPIVKGVGSERAYEKLT 415

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQLFS 470
           E+++ +GGSG++++  I ++ R+S  +S+  G+      D      + +KG  L     +
Sbjct: 416 ESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKIIRDKGQALAH--VA 473

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
              QD   +G+          +  ++ + +A  LT  +
Sbjct: 474 GQIQDFIDNGQGFDAERALLKTANEDVQAMAAKLTGWL 511


>gi|254427189|ref|ZP_05040896.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp.
           DG881]
 gi|196193358|gb|EDX88317.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp.
           DG881]
          Length = 595

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 79/480 (16%), Positives = 160/480 (33%), Gaps = 58/480 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           KV   P         I+ G   S        +   +        ++      +      +
Sbjct: 71  KVVMRPEVKEAFDAYINAGFLSSRASFEEGGMQLPEIAAAACKGMFTCVNPSSTGYAFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++    +  +   +               PM        + LTE   G+ +  I 
Sbjct: 131 AAAANVIRNFGSDTLKTRFLE-------------PMMAGRFTGTMALTEPHAGSSLTDIR 177

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV-GCFLVPRLLEDG---- 265
           ++     DG Y L G+K F+S   ++       ++LA++ G   G   +   +       
Sbjct: 178 TRAVPQDDGSYRLKGNKIFISGGENELADNIVHLVLAKIPGGPEGVKGISLFVVPKYRLD 237

Query: 266 ------SPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILI 316
                 + N +    L +K+G R   +  L F    +  G+L+G+ +     +  M    
Sbjct: 238 DDGNPDARNDVILAGLIHKLGYRGTTSTALTFGDGDDCHGYLVGEPHQGLRYMFQMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALD 365
            +     +          A+ YAR R                 +I+   +KR +      
Sbjct: 298 RVGVGFGAGLLGYRGYRFALDYARDRVQGRHPDDADFSKPQVPIIEHADVKRLLLTQKAY 357

Query: 366 IAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             AA A+S       DE ++       E      ++ P+ K W  +        A++  G
Sbjct: 358 AEAAIAMSLYGYRLVDEIQTGEEAAAKEAELLLDLLTPVLKTWPSEFGLKANDMAIQVFG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478
           G+GY  E  + + +R++  N I  G+     LD+L   +          L S +  D+ +
Sbjct: 418 GAGYTREYPVEQVWRDNRLNPIHEGTTGVHGLDLLGRKVWMDNGKGMMLLASRIMADVQA 477

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTE--------KIALASSAAALYRAGMNDIADVFL 530
           +  +    + +++     +   A             + AL+++ A L   G    A ++L
Sbjct: 478 TTDERCKPMAEALQAMLPNIEKATQAVGKQMASDGPRAALSNANAYLQLLGHTVAAWMWL 537


>gi|239980708|ref|ZP_04703232.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291452567|ref|ZP_06591957.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291355516|gb|EFE82418.1| acyl-CoA dehydrogenase [Streptomyces albus J1074]
          Length = 608

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/528 (15%), Positives = 175/528 (33%), Gaps = 73/528 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LE +     +  A   A  A+ N P    + P     +      ++    +  +      
Sbjct: 42  LEEVARLAENDLADSFA-DADRNPPV---FDP---ETNTAPLPESFKKSYKAFMESEYWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                        ++     A L L A        S    +  +                
Sbjct: 95  LGLPEEIGGTTAPRSLIWAHAELILGANPAIWMYSSGPAFAGILFEE------------- 141

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
               E          +      + LTE   G+D+ A  ++  + +DG + + G K F++S
Sbjct: 142 --GNEVQKKAAEIAVERQWGSTMVLTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITS 199

Query: 238 PMSDA-----FIMLAQVEG-RVGCFLVPRLLED-----------GSPNGLCYQRLKNKIG 280
              D        +LA+ EG   G   +   L             G+ NG     +++K+G
Sbjct: 200 GEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYEFDWETGEIGARNGAYATNVEHKMG 259

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +++ T E+ F +     G+L+GD +     +  +     +     +++ +      A+ 
Sbjct: 260 LKASNTCEMTFGDKHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIATLSTGYLNALE 319

Query: 338 YARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381
           YA+ R                  +   P ++R++            L    A   D    
Sbjct: 320 YAKERVQGPDLAQFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRTLVLYTAAVQDTIQV 379

Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                +  + + A   ++ PI K +  + +   +A++++  GGSGY++E  I ++ R++ 
Sbjct: 380 KEAAGEDATADHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAK 439

Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCK 495
            +++  G+      D     ++         L   ++  L  + G   +   R+ ++   
Sbjct: 440 IDTLYEGTTAIQGQDFFFRKIVRNQGAALNTLAGEIKGFLAEAQGGDALAGAREQLAKAA 499

Query: 496 -EDKGLAR-FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
            E + L    LT+         ++Y+ G+N         R L      
Sbjct: 500 VELEALVGVMLTDLAGTEKDVKSIYKVGLNT-------TRLLQASGDV 540


>gi|255513843|gb|EET90108.1| acyl-CoA dehydrogenase domain protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 406

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 127/390 (32%), Gaps = 31/390 (7%)

Query: 83  QLHAYGPGGERWDKVEF-----HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            L A     +   + E+     H              L      + +  +       I A
Sbjct: 25  VLEASDRAADEIAEPEYEHYLKHEFNSEAPGILAKHNLLGIPIKKEYGGLEMPP--IISA 82

Query: 138 ARLYLMAQLEA---GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                + QL       +       A  +    T     ++ PK               + 
Sbjct: 83  LEKERLGQLGLGLSSFINVQVFLCAQTIQRWGTEEQKSEYLPKAV-------------RK 129

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
                 GLTE   G+D A++ +Q +K  D            +  ++D  ++ A+     G
Sbjct: 130 EKVFAFGLTEPEAGSDPASLKTQYKKEGDRYIINGTKYLISNGTIADYILVFARSAENPG 189

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
              +  +L D    GL    L+ KIG  ++ T  L+F N       ++G           
Sbjct: 190 T--ISAILVDAKSAGLSRMELREKIGLFTSDTGMLDFENVAAPKENMIGPEGRGMPVAYS 247

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +   L  A   V  +  SL  ++  +R R   G  +    ++++ I+ +  ++  A  
Sbjct: 248 ALLNARLGVAAGCVGVIEASLNASLKRSRERVQHGKQIGKHQLIQQHISAMRQNLEMARW 307

Query: 372 LSFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            ++  A    E +S   + A    +     + K    ++A      A++  GG GY    
Sbjct: 308 PTYFAAIRKGEYESNPNDKALMEEVELRVSLAKRIASRLAFESADRAVQVHGGFGYSLMS 367

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + + + +S    I  G+     L + + +
Sbjct: 368 PVGQLFCDSRVARIYEGTDEIQDLKIASSI 397


>gi|209155496|gb|ACI33980.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor [Salmo salar]
          Length = 441

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 116/334 (34%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  +  +       +   S      +    T    + W P++   E         
Sbjct: 125 AYGLIAREVERVDSSYRSVMSVQSSLVMHPIYAYGTEEQKEKWLPRLARGE--------- 175

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
               +    GLTE   G+D   + ++ +    S          W  +SP++D  ++ A+ 
Sbjct: 176 ----ILGCFGLTEPNHGSDPGGMETRAKFNPSSRTFTLTGSKTWITNSPVADIAVVWAKC 231

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           +    C      + +    G    +++ K   R++AT  +           + N+     
Sbjct: 232 DDGKVCG----FILERGMKGFTTPKIEGKFSLRASATGMIIMDEVEVP---EENLLPKVS 284

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  AE   +A R     R   G  L    +M++ +AD+  
Sbjct: 285 GLGGPFGCLNNARYGIAWGSLGAAEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLT 344

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D  K+       A  M  + K   C  +  +  +A + +GG+G 
Sbjct: 345 EITIGLQACLQLGRLIDAKKA-------APEMISMLKRNSCGKSLDIARQARDMLGGNGI 397

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  I RH     A +   G+ +   L +   +
Sbjct: 398 SDEYHIIRHVMNLEAVNTYEGTHDIHALILGKAI 431


>gi|294678822|ref|YP_003579437.1| acyl-CoA dehydrogenase, medium-chain specific [Rhodobacter
           capsulatus SB 1003]
 gi|294477642|gb|ADE87030.1| acyl-CoA dehydrogenase, medium-chain specific [Rhodobacter
           capsulatus SB 1003]
          Length = 547

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 149/437 (34%), Gaps = 46/437 (10%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW---D 95
           +D+  +AL+A       + L   G   L    + +    +    +     P    W   D
Sbjct: 138 TDAARMALVALMQDNQGRAL--FGASGLDDELEMIRDQFHRYAEE--RVIPNAHDWHLKD 193

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           ++        ++      G+        +  +   +A  +          +  G L + S
Sbjct: 194 ELIPM----EIIEELAELGVFGLTIPEEYGGLGLSKASMVVVTEELSRGYIGVGSLGTRS 249

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A ++    T    + W P + S E             +      TE   G+D+ ++ 
Sbjct: 250 EIAAELILCGGTEEQKQKWLPGLASGE-------------ILSTAVFTEPNTGSDLGSLR 296

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP------- 267
           ++  K  D         W   +  +    +LA+ E        +   L + +P       
Sbjct: 297 TRAVKDGDDWVITGNKTWITHAQRTHVMTLLARTEPDTTDWRGLSMFLAEKTPGTDENPF 356

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVEDMKILIYLDSA 321
              G+    ++  +G R     EL F      G   L G+       + +      + +A
Sbjct: 357 PTPGMTGGEIE-VLGYRGMKEYELGFDGFRVKGENLLGGETGRGFKQLMETFESARIQTA 415

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +    + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D
Sbjct: 416 ARAVGVAQAACEIGMRYAIDRKQFGKSLIEFPRVGGKLAMMAVEIMIARQLTYFSAWEKD 475

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EA  A+++         ++A A    A++  GG+G+  E +I+R   ++   +
Sbjct: 476 HGHRCDVEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYAISRILCDARILN 528

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 529 IFEGAAEIQAQVIARRL 545


>gi|242238831|ref|YP_002987012.1| acyl-CoA dehydrogenase [Dickeya dadantii Ech703]
 gi|242130888|gb|ACS85190.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 383

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 139/371 (37%), Gaps = 30/371 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+        +  +     +  +   L  +A+  A   +  
Sbjct: 33  DQTGTYP--KEFMKALSDNGISLLGVPEEYNGI--PADYVTQMLALMEVAKCGAPAFLIT 88

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +    +             T ++ +     A  L LTE   G+D ++ 
Sbjct: 89  NGQCIHSMRRFGSAEQLR------------KTAESTLATGDPAYALALTEPGAGSDNSSA 136

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ-VEGRVGCFLVPRLLEDGSPNGLCY 272
           ++   +  +G   L+G K F++      + ++LA+  E +           + +  G+  
Sbjct: 137 STSYTRK-NGKVYLNGQKTFITGAKEYPYMLVLARDPEPKDPKKAFTLWWVESNKPGIKI 195

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A  S     
Sbjct: 196 NPL-HKIGWHMLSTCEVYLDNVEVDESDMVGEEGMGFLNVMYNFEMERLINAARSAGFAE 254

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A +A+ I     +  ++A   D  +S    
Sbjct: 255 CAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVMKVAWQADMHQS---- 310

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               R  A + K +C + +  VI +A++ +GG GY ++  ++R +R+     I  G+   
Sbjct: 311 ---LRTSAALCKLYCARTSLEVIDDAIQIMGGLGYTDDARVSRFWRDVRCERIGGGTDEI 367

Query: 450 MVLDVLNLLEK 460
           M+      + K
Sbjct: 368 MIYIAGRQILK 378


>gi|260060772|ref|YP_003193852.1| acyl-Coa dehydrogenase-like protein [Robiginitalea biformata
           HTCC2501]
 gi|88784902|gb|EAR16071.1| Acyl-CoA dehydrogenase-like protein [Robiginitalea biformata
           HTCC2501]
          Length = 392

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/352 (21%), Positives = 133/352 (37%), Gaps = 40/352 (11%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMT 166
            GL        + P     A   + +   +M ++E G     S  S         +    
Sbjct: 56  AGLAEIGAFGPYIPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASVQSSLVMYPIFAYG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
                + + PK+ S E+                 GLTE   G++ A + +  +   D   
Sbjct: 116 NEAQREKYLPKLASGEWMG-------------CFGLTEPDHGSNPAGMVTNFKDAGDHYL 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 W  ++P +D  I+ A+  EGR+   +V R +E     G       NK   R++A
Sbjct: 163 LNGAKLWISNAPFADIAIVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASA 217

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
           T EL F N         N+  G       L  LDSA   ++   +  A      A+ YA+
Sbjct: 218 TGELIFDNVKVPKD---NLLEGKSGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAK 274

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    + ++ +A++  +I  A  L+FRL    +E ++ + + + A+      
Sbjct: 275 ERVQFGKPIAGTQLQQKKLAEMITEITKAQLLAFRLGQLRNEGRATTAQISMAKR----- 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                +MA  +  EA + +GG G   E SI RH     +     G+ +  +L
Sbjct: 330 --NNVEMALNIAREARQVLGGMGITGEYSIMRHMMNLESVITYEGTHDIHLL 379


>gi|219847033|ref|YP_002461466.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541292|gb|ACL23030.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 394

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/369 (20%), Positives = 142/369 (38%), Gaps = 30/369 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      L+ R    G+          P        + AA L          +  
Sbjct: 45  WERAEFP---FELISRIAELGIVGGTIQGYGCPGFTSVEVGLIAAELARGDGSVGTFVGV 101

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A   +    + W P              M +        LTE   G+D A 
Sbjct: 102 TSGLAMGAIAACGSEEQKQRWLP-------------AMARLEKIGAFALTEPYVGSDAAH 148

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLC 271
           I +  +++  G       +W  ++  +D  ++ A+ E  GR+G FLV     +    G  
Sbjct: 149 IRTTAKRVDGGYLLNGEKRWIGNATFADVIVVWAKDEETGRIGGFLV-----EKGTPGYQ 203

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
             +++ KI  RS    +++ +N F      L ++    +   IL       A  +V   +
Sbjct: 204 ATKIEGKIAKRSVINADIKLNNVFVPEANRLPLARSFRDTANILKNTRYGVAWEAVGHAQ 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ Y  +R   G  +    ++++ +  +  D+ A   +++RL+   DE +++  E
Sbjct: 264 AAYELALDYTLQREQFGRPIAGFQLVQQKLVQMLGDLTAIQLMAWRLSKLRDEDENQITE 323

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 MA + K +C   A  ++A   E +GG+G + +R IARH+ +  A     G+   
Sbjct: 324 G-----MASLAKQYCAGKARQIVALGREVLGGNGILLDRHIARHFADIEAVYTYEGTNEI 378

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 379 NTLVVGREI 387


>gi|256159807|ref|ZP_05457547.1| glutaryl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|256255062|ref|ZP_05460598.1| glutaryl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|261222252|ref|ZP_05936533.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|265998216|ref|ZP_06110773.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|260920836|gb|EEX87489.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           B1/94]
 gi|262552684|gb|EEZ08674.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti
           M490/95/1]
          Length = 394

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 132/379 (34%), Gaps = 41/379 (10%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           +    P    L+ ++   GL        +        A+ + A  +  +       +   
Sbjct: 47  EETTDPELFHLMGQA---GLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQ 103

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    K + P + S E             +    GLTE   G+D A +
Sbjct: 104 SSLVMYPIYAYGSDEQRKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ +KI  G        W  +SP++D F++ A+         +   + +    GL   +
Sbjct: 151 KTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA--IRGFILEKGMKGLSAPK 208

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+   ++ T E+           +L +++   GP         L+ A   +S   + 
Sbjct: 209 IGGKLSLCASITGEIVMDGVEVSEDAILPNVSGLKGP------FGCLNRARYGISWGVLG 262

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R      L    + ++ +AD+  +IA     S R+   FDE K  
Sbjct: 263 AAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGLQASLRVGRLFDEGK-- 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+
Sbjct: 321 -----MAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGT 375

Query: 447 GNAMVLDVLNLLEKGTNLF 465
            +   L +L   + G   F
Sbjct: 376 HDVHAL-ILGRAQTGIQAF 393


>gi|160899902|ref|YP_001565484.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160365486|gb|ABX37099.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 389

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/406 (18%), Positives = 136/406 (33%), Gaps = 38/406 (9%)

Query: 71  QELARMANYNTPQLHAYGPG-GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
            +     + +    H       +    V+ H A  A  R+ +   L  + W R   P   
Sbjct: 7   LDWPFFDDAHRTLAHEADAWCAQSLGDVDHHDA-DAACRQLVKA-LGEAGWLRYAVPSGP 64

Query: 130 KQAHKIRAARL-----------YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             A       +               +  A    +     +  ++LM +  + + + P++
Sbjct: 65  GGAWGGALPEVDSRAVCILRETLARHEGLADFAFAMQGLGSGAISLMGSDALRQRYLPRV 124

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E                   L+E   G+D+AA+  + +   D         W  +  
Sbjct: 125 ARGE-------------AIAAFALSEPDAGSDVAAMACEARLEGDHYVLNGAKTWISNGG 171

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D + + A+     G   +   + D    G         I     AT  + F N    +
Sbjct: 172 IADFYCVFARTGEAPGARGISAFVVDADTPGFSIGERIELIAPHPLAT--IRFDNCRIPV 229

Query: 299 LGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              L     G    M  L       A  ++   R +L E +  A+ R + G  L D  + 
Sbjct: 230 SQRLGEPGQGFKLAMMTLDIFRASVAAAALGFARRALDEGLARAKSRRMFGQTLGDLQLT 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           + A+ D+   I A+  L++R A   D  K+R+         A + K    + A AVI  A
Sbjct: 290 QAALGDMDTAIDASALLTYRAAWMRDVKKTRT------TREAAMAKMTATESAQAVIDRA 343

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           ++  GG+G +    +   YRE  A  I  G+     L +   L K 
Sbjct: 344 LQMFGGAGVVSGMPVETLYREIRALRIYEGATEVQKLIIARELLKA 389


>gi|296134748|ref|YP_003641990.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295794870|gb|ADG29660.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 393

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/357 (18%), Positives = 123/357 (34%), Gaps = 33/357 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL       ++             AR           +MS  S      +    
Sbjct: 58  REMGALGLLGPTIPEAYGGAGLNYVGYGLIAREVERVDSGYRSMMSVQSSLVMLPIFAFG 117

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK+   E+                 GLTE   G+D   ++++ + +  G  
Sbjct: 118 SEAMKQKYLPKLARGEW-------------IGCFGLTEPDHGSDPGGMSTRARAVPGGYA 164

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+ +       +   + D    GL    +  K+G R++ T
Sbjct: 165 LNGNKMWISNSPIADVFVVWAKDDAGE----IRGFVLDKGAKGLSAPAVHGKVGLRTSIT 220

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            E+     F           G          L+SA   ++   +  AE     A  Y   
Sbjct: 221 GEIVMDQVFCPEENAFPTVCGLK---GPFTCLNSARYGIAWGAMGAAEDCYARARQYVLD 277

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    ++++ +AD+A DI+       RL    DE  +       A  +  + K
Sbjct: 278 RKQFGRPLAANQLVQKKLADMATDISLGLQGVLRLGRMKDEGTA-------APEVTSLLK 330

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 331 RNNCGKALDIARTARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAI 387


>gi|255535480|ref|YP_003095851.1| Glutaryl-CoA dehydrogenase [Flavobacteriaceae bacterium 3519-10]
 gi|255341676|gb|ACU07789.1| Glutaryl-CoA dehydrogenase [Flavobacteriaceae bacterium 3519-10]
          Length = 393

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 112/296 (37%), Gaps = 32/296 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +    + + PK+ + E                  GLTE   G+D  A+ +  +  
Sbjct: 112 INEFGSEEQKRKYLPKLATGEM-------------IGAFGLTEPNHGSDPGAMETHFEDK 158

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  ++P+ D  ++ A+ E       V  ++ +    G       NK   
Sbjct: 159 GDHYLLNGAKMWITNAPLCDIAVVWAKNEQGK----VQGMIVERGFEGFTTPETHNKWSL 214

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
           R++ T EL F++     +   N+    +     L  L+SA   +S   +  A      A+
Sbjct: 215 RASKTGELVFNDVK---IPKENILPNVIGLKGPLSCLNSARYGISWGVIGAAIDCYCTAL 271

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y++ R   G  +    + ++ +A+   +I  +  L  +L N  ++ K+   + + A+  
Sbjct: 272 QYSKERKQFGKPIASFQLQQKKLAEFLTEITKSQLLCLQLGNLKNDHKASPAQISMAKR- 330

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                    KMA  +  E+ + +GG G + E  + RH     +     G+ +  +L
Sbjct: 331 ------NNVKMAIEIARESRQMLGGMGIMGEFPMMRHAANLESVITYEGTHDIHLL 380


>gi|163794410|ref|ZP_02188381.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium
           BAL199]
 gi|159180134|gb|EDP64657.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium
           BAL199]
          Length = 601

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/522 (17%), Positives = 170/522 (32%), Gaps = 77/522 (14%)

Query: 39  SDSLLVALIANFPSVVHKELELLG------EYVLSCTAQELARMANYNTPQLHAYGPGGE 92
           +DSLL      +P     + E  G        +        A  ++ N P+L        
Sbjct: 21  ADSLLA-----YPRFADHDREAFGQVIDTARRIAEAKFLPHAAKSDANEPRLEN------ 69

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
              KV   P     L+     G   +  D     +      +  A   +  A        
Sbjct: 70  --GKVVLIPEIGEALQAFAEAGFMAAHHDHDRGGMQLPWTIQQAAFAHFKAANTPTVGYA 127

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++ +A+++    T    + W              APM        + L+E   G+ ++
Sbjct: 128 FLTIAAANLIHAHGTVEQQRLWM-------------APMLDGRFFGTMALSEPHAGSSLS 174

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRL 261
            + +  + +    Y + G K + S    +       + LA++EG       +  F+VPR 
Sbjct: 175 DVRTSARPLGGERYAIKGSKMWTSGGEHELTRNIVHMTLARIEGAPAGVKGLSLFIVPRY 234

Query: 262 L-----EDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMK 313
                 E  +PN +    L +K+G R      L F    +  G+L+G+ N     +  M 
Sbjct: 235 RLDEAGEPAAPNDITLIGLNHKMGYRGTVNTALAFGENDDCVGWLVGEPNRGLAQMFHMM 294

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADI 362
               +  A+ ++         ++ YAR R                 LI+   ++R +   
Sbjct: 295 NEARVGVAMGAIMLAYQGYLVSLDYARTRPQGRHPGDKDPTTPQLALIEHADVRRMLLQQ 354

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAM 416
                    L+  LA   D      +E            + PI K W    A    + A+
Sbjct: 355 KAVAEGGLMLALDLAMRIDRQHQDPDETVRRRETLLLDFLTPIIKAWFTDRALEANSNAI 414

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQ 474
           + +GG GY  +  + R YR++  N I  G+     +D+L           F  +   +  
Sbjct: 415 QVLGGYGYTRDYPVERIYRDNRLNPIHEGANAIQAIDLLGRKAGMAEGAAFAAVIDEIRA 474

Query: 475 DL-GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515
            L  + G+  +  +R   +   +       L    A    AA
Sbjct: 475 TLTAADGRAEVEAIRRETADALD------RLVSVTATLLKAA 510


>gi|163738244|ref|ZP_02145660.1| isobutyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
 gi|163740182|ref|ZP_02147576.1| isobutyryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161386040|gb|EDQ10415.1| isobutyryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10]
 gi|161388860|gb|EDQ13213.1| isobutyryl-CoA dehydrogenase [Phaeobacter gallaeciensis BS107]
          Length = 561

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 136/369 (36%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A     +       +  G L + S  +A ++  
Sbjct: 212 EIIEELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELIIA 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PKI S E  PT                TE   G+D+ ++ ++  K  +G
Sbjct: 272 GGTEEQKASWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDDNG 318

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 319 DYQITGNKTWITHAARTHVMTLLARTDPDTTDHRGLSMFLAEKTPGTDENPFPTEGMTGG 378

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L GD       + +      + +A  ++   +
Sbjct: 379 EIE-VLGYRGMKEYELGFDGFHVKRENLLGGDEGKGFKQLMETFESARIQTAARAIGVAQ 437

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI  P +   +A +A++I  A  L++  A   D       E
Sbjct: 438 SALDIAMQYAQDRKQFGKPLIAFPRVASKLAMMAVEIMIARQLTYFSAWEKDNGHRCDLE 497

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 498 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 550

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 551 QAQVIARRL 559


>gi|323525666|ref|YP_004227819.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323382668|gb|ADX54759.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 380

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 128/368 (34%), Gaps = 32/368 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+         L +R    GL        +  +    +   +      +        +  
Sbjct: 34  DRFIPKEKMRELTQRIAEFGLPGCTIPVEYGGMG--WSFTTQGMLFEELVACSCDIALCV 91

Query: 155 SVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +       L    P V + + P   +               +   +G++E   G+++A 
Sbjct: 92  MLNMGLTAMLCNARPEVRERYMPDALAG-------------KIFGSIGISEPDVGSNVAE 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++  +  D         W  +   SD  I   +     G   +  +L D   +G    
Sbjct: 139 LKTRAVRDGDHFIVNGEKTWITNGVYSDVLICTVR-----GEKGLSHILIDRVEHGYE-S 192

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           R  +KI   S +T ++  ++     +  +     G    MK+          +SV  MR 
Sbjct: 193 RNIDKIALGSQSTAQIFITDARVPAINLIGEEGEGLRNTMKVFENARAHVGTLSVGIMRT 252

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L E+I YA +R   G ++    ++   IA++ + + AA  +  R+    D       +A
Sbjct: 253 ALEESIAYATQRKQFGKVIAAHQLIAAKIANMGIMVDAARLMCQRVFGLIDAGVRCDLQA 312

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +  + A  V  +A++  GG+G   E ++ R  RE+    I  G+    
Sbjct: 313 SMA-------KAFATEAAVQVCRDAVQLHGGNGITREFNVERLLREAIIIPIPDGTTEIQ 365

Query: 451 VLDVLNLL 458
            L +   L
Sbjct: 366 QLIISRAL 373


>gi|172060313|ref|YP_001807965.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171992830|gb|ACB63749.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 609

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 100/576 (17%), Positives = 198/576 (34%), Gaps = 94/576 (16%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +   +D+L    +  +     +  + +    E + +      A   +   P+       
Sbjct: 15  YDWLDADAL--GALPRYAEHSRETFDAVLDTSERIAADLFASHAARGDREEPRF-----D 67

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GER   +   P     +R     GL  +  D +F  +   +  +  +   +  A +    
Sbjct: 68  GERVTLI---PEVEPAVRAFAAAGLIAAGQDEAFGGMRLPKLVEAASFLFFQAANIATAA 124

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +V +A+++    +P     +A              P  +      + L+E + G+ 
Sbjct: 125 YPFLTVANANLLLAHGSPAQIDAFA-------------RPELEGRFFGTMCLSEPQAGSS 171

Query: 211 IAAITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--------- 252
           ++ I ++            Y ++G+K ++S    +       ++LA++            
Sbjct: 172 LSDIVTRADFECASPLGPRYRITGNKMWISGGDHELAENIVHLVLAKIPDEQGRLPPGTR 231

Query: 253 -VGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFS-----------NT 294
            +  F+VP+ L        G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKYLPADDGAARGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGA 291

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------- 345
            G+L+G+ N     +  M     +     +V+        A+ YAR R            
Sbjct: 292 IGYLVGEPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRALGPAGKD 351

Query: 346 ----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARI 395
                  ++  P ++R +      +    AL    A   DEA++      R+E A    I
Sbjct: 352 AAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHGDAAVRAEAAQLLDI 411

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     LD+L
Sbjct: 412 LTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQALDLL 471

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE--------- 506
               K       L  TL+  +G++ ++      D+ S           L E         
Sbjct: 472 G--RKVGQDDGALLRTLDARIGATVQRARAADGDARSHADALAQRWARLVELTRALAALD 529

Query: 507 --KIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             ++ LA+++  L   G   +A ++L+     + H 
Sbjct: 530 DPQVRLANASVYLEAFGHLVVAWLWLDVTLAAHGHD 565


>gi|289645095|ref|ZP_06477122.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505092|gb|EFD26164.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 382

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 129/362 (35%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               R     G+    +   +    +    +          A +  G L           
Sbjct: 40  RDFFRNLGKLGVLGMAFPAEYGGGDQPDFTYNAVINEECARALVALGTLQVHLDVVVPYF 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      W P + S               +   +G+TE   G+D+A + +   +  
Sbjct: 100 LDHADEAQRGRWFPGLVSG-------------DLFAAIGMTEPGAGSDLAGVRTTAVRDG 146

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKI 279
           +  Y L+G K F+S   ++D  +++A+           +  L+ +    G    R   KI
Sbjct: 147 EH-YVLNGAKTFISGGALADLVVVVARTSRSESDRRRGLSLLVVEDGMPGFEKGRNLAKI 205

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +   T+EL F++       LLG+   +   +        L  AI S++  R +L   +
Sbjct: 206 GLKVQDTIELSFTDVRVPVENLLGEEGAAFEQLTHGLPQERLSIAISSLAAARAALDTTV 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R RHV G  +      +  +A +A +I AA A+        D A +       + + 
Sbjct: 266 TYVRERHVFGKPVSYFQNTRFELAAVATEIEAAQAMV-------DRALAEHVAGELSPVD 318

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +C ++    +   ++  GG GYI E  IAR Y ++    I  G+   M   +  
Sbjct: 319 AAKVKLYCTELQGRTVDRCLQLFGGYGYILEYPIARLYADARVTRIYGGTSEIMKTIISK 378

Query: 457 LL 458
            L
Sbjct: 379 SL 380


>gi|222480983|ref|YP_002567220.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453885|gb|ACM58150.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 386

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 122/356 (34%), Gaps = 23/356 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G +    +    P V + A+ +    L                     +  
Sbjct: 45  DLIPKMGEMGFYAPNLEGYGLPGVSETAYGLLMRELEACDSGLRSMASVQGALVMYPIHA 104

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W PK+ + E                  GLTE   G++ +A+ ++ +   D 
Sbjct: 105 FGSDAQKEEWLPKLGTGE-------------AVGCFGLTEPEHGSNPSAMETRAEADGDD 151

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D  ++ A+     G   V   L +   +G+   ++  K+  R++
Sbjct: 152 YVLNGSKTWITNSPIADVAVVWAKDHTEEGTP-VRGFLVETDRDGVTTNKIDEKLSLRAS 210

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
            T E+   +        L   TG    +  L       A  +V         A  YA  R
Sbjct: 211 ITGEISLQDVHVPAENVLPEVTGMKGPLSCLTQARYGIAWGAVGAAMDCFEVAREYATDR 270

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + ++ +A++A  I  A  L+ RLA+  +  + R +  + A+        
Sbjct: 271 EQFGKPIGGFQMQQQKLAEMATQITLAQLLAHRLADLKEAGEMRPQHVSMAKR------- 323

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + A      A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 324 NNVRTARDQSRIAREMLGGNGITADYSPMRHMTNMETVYTYEGTHDIHTLIIGEDL 379


>gi|146303061|ref|YP_001190377.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701311|gb|ABP94453.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 398

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 135/378 (35%), Gaps = 31/378 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R ++ E       +  +    GL+     + +               L L+   E    
Sbjct: 36  NRVEEGERKGDLGEVREKIKELGLNGLDVPQEYGGAGGDY--------LSLLVATEEISR 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           + PS+++  ++  M T  + +        ++       P+ +         TE   GTD+
Sbjct: 88  IWPSLSTFFLINWMFTSALLRFG-----GKDIKERYVPPVARGEKIAAFANTEPGAGTDV 142

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG--RVGCFLVPRLLEDGSPN 268
           A ++S  +K+ +G Y L+G K F++S   +D  I+ A+           +   + +    
Sbjct: 143 AGMSSVAKKV-NGGYVLTGKKIFITSGDLADYIIVTARTSPPSEQRWKGITMFVVERDFP 201

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAI----- 322
           G   +   +  G +++ T E+ F+        + NV     +  K  +   D A      
Sbjct: 202 GFKVESRIDTTGLKASHTTEISFNEVKVP---EENVVGEVGQGFKYAVSSFDYARTIVAS 258

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L + + Y+  R   G  +    ++++ +++   D+     L +   + +  
Sbjct: 259 QALGIGQAALEKMVRYSMDRKSFGQSIAGFQMVQQKVSESMADLTTTRLLVYWAGSLYKR 318

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 E   A   A + K++  + A  ++  AM   GG G      + R  R+      
Sbjct: 319 GMEN--EYIMA---ASLAKFFATEAAERIVLRAMTVHGGYGVTTSTGLERMLRDIQILKT 373

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+ +   +       +
Sbjct: 374 YEGTNDIQRVSAARHFYR 391


>gi|187476740|ref|YP_784764.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115421326|emb|CAJ47831.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 387

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 129/397 (32%), Gaps = 30/397 (7%)

Query: 71  QELARMANYNTPQLHAYGPGGE----RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
            +   +   +                  D+ + + A   L++     G       +    
Sbjct: 8   LQWPFLDERHRILGRELDAWCHTHLSDIDEADVYAACRRLVQALGEGGWLRYSVPQE-GA 66

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                A    +     +  ++L  +      + P++ S      
Sbjct: 67  ATLDARSLCVIRETLASHHALADFAFAMQGLGSGAISLAGSAAQRAAYLPEVASG----- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                          L+E   G+D+AA++ + +  SDG        W  +  ++D + + 
Sbjct: 122 --------RSIAAFALSEPEAGSDVAALSCRAEAQSDGFVLNGHKTWISNGGLADFYCVF 173

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A+  G  G   +   + D    GL  +   + +         L F         LLGDLN
Sbjct: 174 ART-GEPGSRGISAFIVDADTPGLVIEERIDVMSPH--PLALLRFDRCRVPASQLLGDLN 230

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                      +  +  A  ++   R +LAE + YA +R + G  L D  + + A  + A
Sbjct: 231 QGFKLAMRTLDVFRISVAAAALGFARRALAEGLDYASQRKMFGQTLADFQLTQAAFGEAA 290

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I  +  L++R A   D  +  S       +   + K    + A  VI   ++  GG G
Sbjct: 291 TEIDQSALLTYRAAWVRDVPQQSS------TMETAMAKMAATESAQQVIDRVLQMFGGRG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +    + R YR+  +  I  G+     L +   L +
Sbjct: 345 VVRGNVLERLYRDIRSLRIYEGATEVQKLIISRELMR 381


>gi|309365035|emb|CAP23738.2| hypothetical protein CBG_02861 [Caenorhabditis briggsae AF16]
          Length = 370

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 136/386 (35%), Gaps = 33/386 (8%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            Y   +L        R    +F P+   L+      GL  + +            + + A
Sbjct: 6   EYCQERLLPRVTEAYR--NEKFDPS---LIPEMGSMGLLGAPYQGYGCAGTSTVGYGLIA 60

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             +  +       +   +      +    T    + + P + S                 
Sbjct: 61  REVERVDSGYRSTMSVQTSLVIGPIYNYGTEEQKQKYIPDLASG-------------KKI 107

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255
              GLTE   G++   + ++         Y LSG K ++S+ P++D  ++ A+   R G 
Sbjct: 108 GCFGLTEPNHGSNPGGMETKAIWDETSKTYKLSGSKTWISNSPVADVMVVWARSS-RHGN 166

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
            +   +LE G   GL   +++ K+  R++ T ++   +       LL ++    GP   +
Sbjct: 167 KIKGFILERG-MKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNVEGLQGPFGCL 225

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A  S+         A  Y   R   G  L    +M+  +AD+  +I+     
Sbjct: 226 NN-ARLGIAWGSLGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQG 284

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             R++   DE K   E+         I K   C  +  +  +A + +GG+G ++E  I R
Sbjct: 285 CLRVSRLKDEGKVEPEQ-------ISIIKRNSCGKSLEIARKARDMLGGNGIVDEYHIMR 337

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H       +   G+ +   L +   +
Sbjct: 338 HMVNLETVNTYEGTHDVHALILGRAI 363


>gi|47214068|emb|CAG00726.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 564

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 151/412 (36%), Gaps = 69/412 (16%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           + L   P   + + PK+ S    P                      G             
Sbjct: 121 ILLFGNPAQKEKYLPKLASDHRRP-------------------VTCGK------------ 149

Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVG--CFLVPRLLEDGSPNGLCYQRL 275
               Y ++G K ++S+   ++ F + A+    + + G     +   + + S  G+ +   
Sbjct: 150 ---YYTMNGSKIWISNGGLAEIFTVFAKTPVKDPKTGEMKDKITAFVVERSFGGVTHGPP 206

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRV 330
           + K+G +++ T E+ F N        L    G  +    +  L++    ++      M+ 
Sbjct: 207 EKKMGIKASNTAEVYFDNVRVPAECVLGEVGGGFKVAMNI--LNNGRFGMAAALSGTMKG 264

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            +++A+ +A  R   G  +     ++  +A +A+      ++++ ++ + D        A
Sbjct: 265 VISKAVDHAANRTQFGNKIHTYGAIQEKVAHMAMLQYVTESMAYMVSGNMDSG------A 318

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              +I A I+K +  + A  V  E ++ +GG G++++  + R  R+     I  G+ + +
Sbjct: 319 TEFQIEAAISKIFASEAAWTVTDECIQIMGGMGFMKDSGVERVMRDLRIFRIFEGTNDIL 378

Query: 451 VLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
            L V LN  +   N  + L   L+  LG++G     + + +        GL    +    
Sbjct: 379 RLFVALNGFQNAGNQLKSLQKALKNPLGNAGLLAGELSKRAKQKVGLSTGLTLQGSVHPE 438

Query: 510 LASSAAA---------------LYRAGMNDIADVFLENRFLDNCHSTHCMLH 546
           LA S                  L + G   I + F+  R  D     + M+ 
Sbjct: 439 LAQSGDLTVKAIEQFGAVVEEMLIKHGKKIIDEQFVLKRVADCAIDLYAMVA 490



 Score = 37.2 bits (85), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +ID+  + + +AD A+D+ A  A+  R + S  +        A A+    +   WC 
Sbjct: 465 GKKIIDEQFVLKRVADCAIDLYAMVAVLSRASRSLTQGT------ASAQHEKLLCDTWCR 518

Query: 406 KMAPAVIAEAMECI 419
           +    +  +  E  
Sbjct: 519 EAYGRITRDVQELR 532


>gi|159125110|gb|EDP50227.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 541

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/390 (20%), Positives = 137/390 (35%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL  + +         +          + M   
Sbjct: 157 PYVTEWDEAKKVPDSVYKQMGERGYLAGLLGTKYPIQHTRNRVQSVAPENWDLFHEMLLT 216

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P + K     +  R         +      I L +TE
Sbjct: 217 DELSRAGSGGLVWNLIGGFGIGCPPLVKFGKKPLVDR-----ILPGILAGDKRICLAITE 271

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 272 PDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGGPGMNGISVLLI 331

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 332 EREAGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGI 390

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I A       L N  
Sbjct: 391 VIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQIEATYNW---LENII 447

Query: 381 DEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +S  E  A  ++   I   K            EA +  GG  Y        + R YR
Sbjct: 448 YQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYSRGGQGGKVERLYR 507

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    +   LF
Sbjct: 508 DVRAYAIPGGSEEIMLDLSVRQSLRVHQLF 537


>gi|326316886|ref|YP_004234558.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373722|gb|ADX45991.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 389

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 129/403 (32%), Gaps = 31/403 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW----HALLRRSIHDGLHCSIW 120
           +   T  +       +                 +  P       AL+R     G      
Sbjct: 1   MADTTYLDWPFFEPRHAQLARDLDAWARAHLHAQHGPDVDAECRALVRALGDGGWLRHAV 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             S   +  +    IR           A    +     +  ++L  TP+    +  ++  
Sbjct: 61  GESGAAIDTRTLCLIR--ETLARHAGLADFAFAMQGLGSGAISLHGTPQQRARYLERVAR 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E                   L+E   G+D+AA+    +             W  +  ++
Sbjct: 119 GE-------------AIAAFALSEPEAGSDVAAMGCTARAEGGDYVLDGEKTWISNGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D +++ A+     G   +   + D    G         I         L F         
Sbjct: 166 DFYVVFARTGEAPGARGISAFIVDADTPGFSIAERIEVIAPH--PLARLRFDGCRVPAAQ 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M+ L       A  ++   R ++ EA+  A  R + GG+L D  + + 
Sbjct: 224 RLGAPGEGFKVAMRTLDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQA 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +A  I +A  L++R A   D   + + EAA A++ A        + A  VI  A++
Sbjct: 284 KLAQMATAIDSAALLTYRAAWLRDRGATVTREAAMAKMTA-------TENAQQVIDAAVQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG G +  + + R YRE  A  I  G+     L +   L K
Sbjct: 337 LFGGLGVVSGQPVERLYREIRALRIYEGATEVQQLIIGRDLLK 379


>gi|308509436|ref|XP_003116901.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
 gi|308241815|gb|EFO85767.1| hypothetical protein CRE_02127 [Caenorhabditis remanei]
          Length = 412

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 130/352 (36%), Gaps = 32/352 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL  + +            + + A  +  +       +   +      +    T    + 
Sbjct: 79  GLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGTEEQKEK 138

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK 232
           + P + S                    GLTE   G++   + ++         Y LSG K
Sbjct: 139 YIPDLASG-------------KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLSGSK 185

Query: 233 WFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            ++S+ P++D  ++ A+   R G  +   +LE G   GL   +++ K+  R++ T ++  
Sbjct: 186 TWISNSPVADVMVVWARSS-RHGNKIKGFILERG-MKGLTTPKIEGKLSLRASITGQIAM 243

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346
            +       + N+             L++A + ++   +  AE     A  Y   RH  G
Sbjct: 244 DDVPVP---EENLLPNVEGLAGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRHQFG 300

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +M+  +AD+  +I+       R++   DE K + E+         I K   C 
Sbjct: 301 RPLAQNQLMQLKMADMLTEISLGLQGCLRVSRLKDEGKVQPEQ-------ISIIKRNSCG 353

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +  +  +A + +GG+G ++E  I RH       +   G+ +   L +   +
Sbjct: 354 KSLEIARKARDMLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALILGRAI 405


>gi|323135956|ref|ZP_08071039.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
 gi|322399047|gb|EFY01566.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp.
           ATCC 49242]
          Length = 557

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 136/366 (37%), Gaps = 37/366 (10%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G+        +      +      +     A +  G L + S  +  ++ +  T   
Sbjct: 214 AELGVFGLTIPEQYGGSGMGKIAMCVVSEELSRAYIGVGSLGTRSEIAGELILVGGTEEQ 273

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PKI S E  PT                TE   G+D+A + ++  +  D +Y ++G
Sbjct: 274 KNKYLPKIASGEILPTAV-------------FTEPNNGSDLAGLRTRAVREGD-VYKVTG 319

Query: 231 HKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQRLKNKI 279
           +K +++ P+ +D   +L +      G   +   + +             G+    ++  +
Sbjct: 320 NKTWITHPVRADIMTLLTRTNPNEKGYKGLSMFIAEKPRGTDENPFPAKGMTGGEIE-VL 378

Query: 280 GNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G R     E+ F N        L G+       + +      + +A  ++   + +L   
Sbjct: 379 GYRGMKEFEIGFDNFEVPAANLLGGEEGKGFKQLMETFESARIQTAARALGVAQCALDLG 438

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  L   P +   I  +A++I  A  +++  A   DE K    EA  +++
Sbjct: 439 LKYAKERIQFGKPLFAFPRVFNKIVSMAVEIHVARQITYFAAREKDEGKRCDLEAGMSKL 498

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +         ++A A    A++  GG+G+  E  ++R   ++   +I  G+       + 
Sbjct: 499 L-------GARVAWAAADNALQIHGGNGFALEYPVSRVLCDARILNIFEGAAEIQAQVIA 551

Query: 456 NLLEKG 461
             L +G
Sbjct: 552 RRLLEG 557


>gi|171679663|ref|XP_001904778.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939457|emb|CAP64685.1| unnamed protein product [Podospora anserina S mat+]
          Length = 544

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 144/405 (35%), Gaps = 31/405 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDR 122
            L    +E         P +         WD+ +  PA  +  +  R    GL  + + +
Sbjct: 145 ALRAEVREWVET--EVEPYVT-------EWDEKKEVPAHIYKQMGERGYLAGLLGTHYQK 195

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            +     K     +    + M   +    +       +++       P + K     +  
Sbjct: 196 DYVKNPIKSVPAEKWDLFHEMLLTDELSRVGSGGFVWNVIGGFGIGCPPLVKFGKKSVVD 255

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
           R         +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +
Sbjct: 256 R-----VLPGILNGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGI 310

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              +  +A   G  G   V  LL +    G+  +R+ +  G  S+ T  + F +      
Sbjct: 311 WCDYFTVAVRTGGPGMNGVSLLLVERDFGGVSTRRM-DCQGVWSSGTTYITFEDVKVPVE 369

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G  N     +        +   I  +   RV   E++ YA +R   G  LI+ PV++
Sbjct: 370 NLIGKENQGFRVIMTNFNHERIGIIIQCLRFSRVCYEESVKYANKRRTFGKKLIEHPVIR 429

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAE 414
             +A +A  I A+      +     + +   +  A  R+  PI   K            E
Sbjct: 430 LKLAHMARQIEASYNWLENV---IYQCEKMGDTEAMLRLGGPIAGLKAQATVTFEFCARE 486

Query: 415 AMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A +  GG  Y        + R YR+  A +I  GS   M+   + 
Sbjct: 487 ASQIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSIR 531


>gi|308048861|ref|YP_003912427.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
 gi|307631051|gb|ADN75353.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM
           9799]
          Length = 389

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/411 (16%), Positives = 142/411 (34%), Gaps = 51/411 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + ++  TA+  A+       QL        R       PA    +      GL  +    
Sbjct: 22  QRLIRDTARAYAQE------QLAPRVRQAYR--DEHTDPAIFREMG---ALGLLGATLP- 69

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +   V   ++ + A  +  +       +   S      +    + +    + P + S E
Sbjct: 70  DYGAGVDYTSYGLVAREIERVDSGFRSMMSVQSSLVMYPIYAFGSEQQKARYLPGLASGE 129

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G+D   + ++ ++   G        W  +SP++D 
Sbjct: 130 Q-------------IGAFGLTEPDHGSDPGGMATRARRDGRGYRLSGSKTWITNSPLADV 176

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
           F++ A+ +       +   + +    GL   ++  K+  R++ T E+   + +     +L
Sbjct: 177 FVVWAKTDDDQ----IRGFILERGMAGLSTPKIDGKLALRTSVTGEIVLEDLWLDEAQML 232

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPV 354
             ++   GP         L++A   ++   +  AEA  +  R     R   G  L    +
Sbjct: 233 PGVSGLKGP------FSCLNNARYGIAWGAMGAAEACWHTARDYTLDRTQFGRPLAATQL 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A++  +IA A   + R               + +  +  + K   C  A  +   
Sbjct: 287 VQTKLANMQTEIALALQGALRAGEMMTAG-------SISPDLISLIKRNNCGKALDIART 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A + +GG+G  +E  + RH       +   G+ +   L +L   + G   F
Sbjct: 340 ARDMLGGNGISDEYPVMRHLCNLEVVNTYEGTYDIHGL-ILGRAQTGIAAF 389


>gi|70730158|ref|YP_259897.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|4582976|gb|AAD24879.1|AF081920_2 putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
 gi|68344457|gb|AAY92063.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5]
          Length = 380

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 74/369 (20%), Positives = 131/369 (35%), Gaps = 29/369 (7%)

Query: 100 HPAWHALLRRSI--HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           H  +    + +I    GL      R +            A   + +   + G + + +  
Sbjct: 31  HSRYFTARQWAICGEAGLLGLSIPREYGGQGLGALSTAIAMHAFGLGCTDMGLVFAAAAH 90

Query: 158 SA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                  +    T    +D  PK+ S E+  +N              +TE   G+D + +
Sbjct: 91  QFACAMPIVEFATAETKRDVLPKLASGEFIGSN-------------AITEPEAGSDSSNL 137

Query: 215 TSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            S+    +DG Y L GHK F  ++P++D F+  A  +   G   V   +   S  GL   
Sbjct: 138 KSRAWPQADGSYRLDGHKSFAGNAPIADIFVTYATTQPEYGALGVSGFIVHRSSAGLRVS 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRV 330
              +K+  RS    E+ F +     +  L       +  +  +  + A      +  M  
Sbjct: 198 EPLDKVCLRSCPAGEVFFDDCRVPEVNRLGEEGQGRQVFQSSMGWERACLFAAFLGMMER 257

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L + I +AR R   G  + D   +   IA + L + +A  L FR     D+        
Sbjct: 258 QLEQTIEHARTRRQFGKPIGDNQAVSHRIAQMKLRLESARLLLFRACWGMDQGDPGQLNI 317

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A        +K    + A A   +A+   GG G +E   I    R+S   +I  G+ +  
Sbjct: 318 AL-------SKLAISEGALASSIDAVRIFGGRGCLESFGIEAMLRDSIGTTIFSGTSDMQ 370

Query: 451 VLDVLNLLE 459
              +   L+
Sbjct: 371 HEIIARELK 379


>gi|324998480|ref|ZP_08119592.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 382

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 135/372 (36%), Gaps = 22/372 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+     PA H L  +    GL    +D +         H         + +++A
Sbjct: 25  PFSDDWEAQGGFPA-HELFPKLGELGLLGLEYDAAVGGQAAD--HLFTVILREELGRIDA 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G +      +  +   M TP +H+       S E       P         + +TE   G
Sbjct: 82  GGIA----MAIGVQTDMATPSLHRFG-----SEELKQRYLVPAIAGEAVCSIAVTEPDAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A + ++  +  D         +  +   +D   +LA+     G     +++      
Sbjct: 133 SDVAGLRTRADRDGDDWVINGSKLYITNGVQADWICLLARTSDEPGARGFSQIVVPSGLP 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G    R  +K+G R + T EL F++    +   +  +  G  + M       + +A   V
Sbjct: 193 GYAVSRKLDKLGMRCSDTAELTFTDLRVPVANTIGEIGRGFQQQMTQFQNERMSAAYDRV 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G+  +L     Y + R   G  LID   +   +A++   +      ++  A +    + 
Sbjct: 253 GGLEQALDRTRDYLKTRRAFGHPLIDNQYLAFQLAELYARLDMVRHYNYACAEAHVRGED 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S+        A + K    +++  V    ++  GG GY+EE   AR  R+    SI  G
Sbjct: 313 TSQ-------FATVAKLAVGRLSRDVAQTCLQYHGGMGYMEETWTARFLRDMTLTSIGGG 365

Query: 446 SGNAMVLDVLNL 457
           +   M+  +  +
Sbjct: 366 ADEVMLQVLTKM 377


>gi|146278761|ref|YP_001168920.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145557002|gb|ABP71615.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 403

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 131/377 (34%), Gaps = 36/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           + E  PA    +      GL  +     +  +     ++ + A  +  +       +   
Sbjct: 56  EEETDPAIFREMG---EMGLLGATVPEEYGGLGASYVSYGLIAREIERVDSGYRSMMSVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P + +              ++    GLTE   G+D A +
Sbjct: 113 SSLVMYPIYAYGSEEQRRRYLPGLATG-------------ALIGCFGLTEPDAGSDPAGM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K + G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 160 KTTARKTATGYVLNGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPK 217

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+   +               VE +K     L+ A   +S   +  A
Sbjct: 218 IGGKLSLRASITGEIVMDSVEV----GEEALLPGVEGLKGPFGCLNRARYGISWGVLGAA 273

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +A R     R   G  L    + +  +A++  DIA     S R+    DEA +   
Sbjct: 274 EACLHAARQYGLDRKQFGRPLAQTQLYQLKLANMMTDIALGAQASLRVGRLLDEANA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M  I K   C  A      A +  GG+G  E+  + RH       +   G+ +
Sbjct: 331 ----APEMISIVKRNNCGKALEAARHARDMHGGNGIQEDFHVMRHMANLETVNTYEGTHD 386

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +   +      F
Sbjct: 387 VHALILGRAITGLQAFF 403


>gi|257094072|ref|YP_003167713.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046596|gb|ACV35784.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 558

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 41/310 (13%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + W PK+   E                 + +TE   G+D+AA+  +  K   G 
Sbjct: 262 GTEAQREKWLPKVAVGE-------------PLCAIAVTEPDTGSDVAAMRLKATKCEGGW 308

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSP------------NGLC 271
                  W   +  +   ++LA+   +  +G   +   L +                G+ 
Sbjct: 309 ILDGVKTWCTMAGKAGVLLVLARSNPDRSLGHKGLSMFLVEKDSYDGHDFEYRQRQGGVL 368

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDSAIMSV 325
             R  + IG R   + E+ F + F      + G      G    M       + +A  ++
Sbjct: 369 SGRAISTIGYRGMHSYEVFFDHVFVPDENLVGGPEGEGKGFYFTMAGFAGGRIQTAARAI 428

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             M+ +   A+ Y++ RH  G  + +  +    +A +A  +  +   ++ +    D+ + 
Sbjct: 429 GVMQAAFERAVSYSQERHAFGKPIGEFQLTLVKLARMATLLTVSRQFTYAVGALMDQGQG 488

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           + E        A + K + C+ A  +  EAM+  GG GY EE  ++R++ ++   SI  G
Sbjct: 489 QME--------ASMVKLFTCRTAEWLTREAMQIHGGMGYAEESPVSRYFLDARVLSIFEG 540

Query: 446 SGNAMVLDVL 455
           +   + L V+
Sbjct: 541 AEETLALKVI 550


>gi|300771433|ref|ZP_07081308.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761422|gb|EFK58243.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 386

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 132/352 (37%), Gaps = 44/352 (12%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM------VALMTTP 168
           L        + P     A   + +   +M +LEAG     S  S         +    + 
Sbjct: 53  LGAIGALGPYIPQEYGGAGLDQLSYGLIMQELEAGDSAVRSAASVQSSLVMFPIYTYGSE 112

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PK+ + E             +    GLTE   G+D  A+ ++  K  DG    
Sbjct: 113 EQKRKFLPKLATGE-------------LIGSFGLTEPNHGSDPGAMETRLSKDGDGYILT 159

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  ++P+ D  ++ A+ E       V  ++ +   NG       NK   R++ T E
Sbjct: 160 GAKMWITNAPVCDLAVVWARDEEGK----VKGIIVERGMNGFTTPETHNKWSLRASKTGE 215

Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
           L F +       +L D++   GP      L  L+SA   +S   +  A      A+ Y+ 
Sbjct: 216 LIFEDVRIPQANILPDVSSMKGP------LSCLNSARYGISWGVIGAAVDCYQTALRYSL 269

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    + ++ +A+   +I  A  LS+RL    +E K+  ++ + A+      
Sbjct: 270 ERQQFGKPVASYQLQQKKLAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMAKR----- 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 MA  +  E+ + +G  G + E  I RH     +     G+ +  +L
Sbjct: 325 --NNVNMALQIARESRQMLGAMGIVGEFPIMRHMMNLESVITYEGTHDIHLL 374


>gi|118464253|ref|YP_883894.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118165540|gb|ABK66437.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 398

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 115/368 (31%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                 + +    L          +      +   + 
Sbjct: 60  RELAREFGRLGLLGMHLHGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIW 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E                  GLTE   G+D AA+ ++ ++   
Sbjct: 120 NFGSEEQKRQWLPGMATGEM-------------LGCFGLTEPDVGSDPAAMKTRARRDGS 166

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A  +  +  FLVP         G     + +K+  R+
Sbjct: 167 DWVLDGRKLWITNGSVADVAVVWAGTDDGIRGFLVPT-----DTPGFTANTIHHKLSLRA 221

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +     L    +  G       L  L  A   +        R +   A+ Y
Sbjct: 222 SITSELVLDDVR---LPGEAMLPGATGLRGPLSCLSEARYGIIWGAMGAARSAWQAALDY 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    + +  + D+A+++     LS  L    D    R E+ ++      
Sbjct: 279 ATQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDSTGLRPEQVSFG----- 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL   
Sbjct: 334 --KLNNTREAIEICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQA 390

Query: 459 EKGTNLFE 466
             G + F 
Sbjct: 391 FTGADAFR 398


>gi|144900537|emb|CAM77401.1| Acyl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 554

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/441 (17%), Positives = 146/441 (33%), Gaps = 53/441 (12%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           A +    + + ++    GE  L     EL R           +    E  +   +   WH
Sbjct: 144 AAVRVRIAQLIEDGHHYGELALDDETLELIRD---------QFRRFVED-NVAPYAHEWH 193

Query: 105 --------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
                    +L      G+        F  +   +              +  G L + + 
Sbjct: 194 LKDELIPLEVLNAVAEMGVFGLTLPEEFGGLGMSKTSMCVVTEELSRGYIGVGSLGTRAE 253

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  T    ++W PKI S E  PT                TE   G+D+ ++ +
Sbjct: 254 IAGELIRLGGTQEQKEEWLPKIASGEILPTAV-------------FTEPNTGSDLGSLRT 300

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGS---- 266
           +  K  D         W   +  +D   +L + +        +  FL P++         
Sbjct: 301 RAVKEGDDYVVTGNKTWITHASRTDVMALLVRTDPNTKDWRGLSMFLAPKVRGTEENPFP 360

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAI 322
             G+    +K  +G R     EL F          L      G  + M+      + +A 
Sbjct: 361 TPGMTGGEIK-VLGYRGMKEYELGFDGFKVPAANLLGQVEGQGFKQLMETFESARIQTAA 419

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + ++     YA+ R   G  +   P +   IA +A++   A  L++  A   D 
Sbjct: 420 RAIGVAQNAMEIGQQYAKDRVQFGKPIYKFPRVACKIAWMAVETMIARQLTYFSAREKDG 479

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 EA  A+++         ++A +    A++  GG+GY EE  I+R   ++   +I
Sbjct: 480 GHRCDIEAGMAKLL-------GARVAWSNADNALQVHGGNGYAEEYQISRILCDARILNI 532

Query: 443 LLGSGNAMVLDVLNLLEKGTN 463
             G+       +   L  G  
Sbjct: 533 FEGAAEIQAQVIARGLLSGAR 553


>gi|89053021|ref|YP_508472.1| Acyl-CoA dehydrogenase [Jannaschia sp. CCS1]
 gi|88862570|gb|ABD53447.1| Acyl-CoA dehydrogenase [Jannaschia sp. CCS1]
          Length = 560

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 126/361 (34%), Gaps = 35/361 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+           +   +A     +       +  G L + S  +A ++    T    
Sbjct: 219 EMGVFGLTIPEEHGGLGMSKASMCVVSEELSRGYIGVGSLATRSEIAAELILAGGTDDQK 278

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W P + S E  PT                TE   G+D+ ++ ++  K  D        
Sbjct: 279 AKWLPGLSSGEILPTAV-------------FTEPNTGSDLGSLRTKATKDGDDWVINGNK 325

Query: 232 KWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN---------GLCYQRLKNKIGN 281
            W   +  +    +LA+          +   L + +P          G+    ++  +G 
Sbjct: 326 TWITHAARTHVMTVLARTIPDTNDYKGLSMFLAEKTPGTDEAPWQDAGISGGEIE-VLGY 384

Query: 282 RSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
           R      + F +    G  L       G  + M+      + +A  ++   + +L   + 
Sbjct: 385 RGMKEYTVNFDDFKVKGENLLGGQEGQGFKQLMQTFESARIQTAARAIGVAQSALDAGMQ 444

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D  +    EA  A+++ 
Sbjct: 445 YAQDRKQFGKGLINFPRVSGKLAMMAVEIMVARQLTYFSAREKDNDRRCDLEAGMAKLL- 503

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   ++A A    A++  GG+G+  E  I+R   ++   +I  G+       +   
Sbjct: 504 ------GARVAWAAADNALQIHGGNGFALEYGISRILCDARILNIFEGAAEIQAQVIARR 557

Query: 458 L 458
           L
Sbjct: 558 L 558


>gi|300790209|ref|YP_003770500.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799723|gb|ADJ50098.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 389

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 114/365 (31%), Gaps = 39/365 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G    +    +  +              L A+L    +      +A  + 
Sbjct: 48  KDLQLKAKESGFWGVLTPEEYGGMGLSAVMAA-----LLEAELGRTFVPFRFGGAADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                   + +     S E                   +TE   G+D  AI +  +K   
Sbjct: 103 FHANEEQKQTYLLPTISGE-------------RKSCFAITEPGAGSDAKAIRTTARKDGS 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGN 281
             + ++G K F++    +D  ++ A  +   G    V   L D            + +G 
Sbjct: 150 D-WIINGEKTFITGGNEADFTMVFAITDPEKGANGGVTCFLVDREAG--WKSEYIDTMGE 206

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAI 336
              A+  L F +        L       E    + ++          ++      ++ AI
Sbjct: 207 WGPAS--LIFQDVRVPETQILGEEGRGFE--LAMQWIGQGRYLLPARAIGSCERLISMAI 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +A  R   G  + ++  ++  IAD  +++ A   L    A   D+        + A   
Sbjct: 263 EHANTRETFGQKIAERQAIQWMIADSGVELEALRWLVLHAAWQVDQGVDSRHAQSMA--- 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  + A  ++   ++  GG GY  E  + R YRE     I  G+       +  
Sbjct: 320 ----KLYGGQKANEIVDRVLQIHGGMGYTRELPVERWYRELRLLRIYEGTDEIQRRTIAR 375

Query: 457 LLEKG 461
            L KG
Sbjct: 376 NLLKG 380


>gi|302543888|ref|ZP_07296230.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461506|gb|EFL24599.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653]
          Length = 608

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/535 (17%), Positives = 197/535 (36%), Gaps = 76/535 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              V  E+  L E  L+ +  +    ++ N P    + P   + +      ++    R  
Sbjct: 38  AKSVLAEISRLSENELAASYAD----SDRNPPV---FDP---KTNTAPLPESFKKSYRAY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +           S       ++    +A   L A        S    +  +    T  ++
Sbjct: 88  MDAEWWRLGVPESLGGTSCPRSLLWASAETILGANTPIWMYASGPAFAGVLHDEGTEEQL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
               A  +  R++  T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 148 K--IAQLMVDRQWGST-------------MVLTEPDAGSDVGAGRAKAVQQEDGTWHIEG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  F+VP+   D      G  NG+   
Sbjct: 193 VKRFITSGEHDVSDNIIHFVLARPEGAGPGTKGLSLFVVPKYDFDWDSGELGERNGVYAT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G R + T EL F       G+LLG+ +     +  +     +     +++ +  
Sbjct: 253 NVEHKMGLRVSNTCELTFGADTPAKGWLLGEKHDGIRQMFKIIEFARMMVGTKAMATLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           AL    A+
Sbjct: 313 GYLNALEYAKERVQGPDLAAFTDKSAPRVTITHHPDVRRSLMTQKAYAEGLRALVLYTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +  S  +    ++ PI K +  + A   +A++++ IGGSGY++E  + 
Sbjct: 373 VQDEIMVQEAAGEDASANSRLNDLLLPIVKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILR 488
           ++ R++  +++  G+      D     ++         L   +++ L  ++G + +   R
Sbjct: 433 QYIRDAKIDTLYEGTTAIQGQDFFFRKIVRDQGQALTVLSEEIKKFLAEAAGGEELAPAR 492

Query: 489 DSISLCK-EDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
           D ++    + +G+    LT+  A     +++Y+ G+N         R L      
Sbjct: 493 DRLAQAAVDLEGIVGAMLTDLSATEQDVSSIYKVGLN-------ATRLLLASGDV 540


>gi|163733856|ref|ZP_02141298.1| isobutyryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161392967|gb|EDQ17294.1| isobutyryl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 587

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 141/388 (36%), Gaps = 44/388 (11%)

Query: 94  WDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +KVE F   WH         ++      G+        +      +A     +      
Sbjct: 219 VEKVEPFAHEWHLKDELIPMEVIDELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRG 278

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T    + W P++ S E  PT                TE
Sbjct: 279 YIGVGSLGTRSEIAAELIIAGGTEAQKEKWLPRLASAETLPTAV-------------FTE 325

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D+ ++ ++  K  +         W   +  ++   +LA+ +        +   L 
Sbjct: 326 PNTGSDLGSLRTRAVKDGENYSITGNKTWITHATRTNVMTLLARTDPDTTDYRGLSMFLA 385

Query: 264 DGSPN---------GLCYQRLKNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVE 310
           + +P          G+    ++  +G R     EL F N    G   L G+       + 
Sbjct: 386 EKTPGDDENPFPTDGMTGGEIE-VLGYRGMKEYELAFDNFEVKGENLLGGEEGKGFKQLM 444

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +      + +A  +V   + +L  A+ YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 445 ETFESARIQTAARAVGVAQSALDIAMQYAQDRKQFGKSLIEFPRVSGKLAMMAVEIMIAR 504

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 505 QLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKI 557

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           +R   ++   +I  G+       +   +
Sbjct: 558 SRVLCDARILNIFEGAAEIQAQVIARRI 585


>gi|297264825|ref|XP_001109931.2| PREDICTED: long-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Macaca mulatta]
          Length = 396

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 115/372 (30%), Gaps = 62/372 (16%)

Query: 97  VEFHPAW-------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           +  H  W         +  ++   GL           +     +          +     
Sbjct: 73  IPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYYAAVVWEEQAYSNCSGP 132

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S    S +    +    K + P++ + +                 + +TE   G+
Sbjct: 133 GFSVHSGIVMSYITNYGSEEQIKHFIPQMTAGKC-------------IGAIAMTELGAGS 179

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGS 266
           D+  I +  +K     + L+G K F+S+   SD  I++A    E       +   L +  
Sbjct: 180 DLQGIKTNAKKDGSD-WILNGSKVFISNGWLSDVVIVVAVTNHEAPSPARGISLFLVENG 238

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G    R  +K+G ++                                  L  A M+VS
Sbjct: 239 MKGFIKGRKLHKMGLKAQ-------------------------------ERLLIADMAVS 267

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  E  +Y ++R   G  +     ++  +A++   I    A         D     
Sbjct: 268 ASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV-------DNCLQL 320

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E        A + KYW  ++  +V  + ++  GG GY+ E  IA+ Y ++    I  G+
Sbjct: 321 HEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGT 380

Query: 447 GNAMVLDVLNLL 458
              M   +   +
Sbjct: 381 NEIMKELIAREI 392


>gi|186472899|ref|YP_001860241.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184195231|gb|ACC73195.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum
           STM815]
          Length = 401

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 116/323 (35%), Gaps = 25/323 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  + L  T      + P++              K        L+E   
Sbjct: 96  ADFALAMQGLGSGAITLAGTHEQKIRYLPRV-------------SKGEAIAAFALSEPDA 142

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA++ Q +   D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 143 GSDVAAMSLQARAEGDCYVIDGDKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADT 202

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F +        L     G    M+ L       A  S
Sbjct: 203 PGLQIAERIDVIAPH--PLARLHFDSARVPRSQMLGAPGEGFKIAMRTLDVFRTSVAAAS 260

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E +  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 261 LGFARRALQEGLARAASRKMFGQTLGDFQLTQTKLAQMALTIDSSALLVYRAAWLRDQGE 320

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A+  A        + A  VI  A++  GG G     ++ R YRE  A  I  
Sbjct: 321 NVTREAAMAKWHA-------SEGAQQVIDAAVQLWGGMGVQSGTTVERLYREIRALRIYE 373

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQ 467
           G+     L V   L K      Q
Sbjct: 374 GATEVQQLIVGRDLLKAHAAQRQ 396


>gi|294338708|emb|CAZ87040.1| glutaryl-CoA dehydrogenase(GCDH) [Thiomonas sp. 3As]
          Length = 393

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 126/358 (35%), Gaps = 35/358 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMT 166
           R     GL       ++             AR           +MS  S      +    
Sbjct: 58  REMGALGLLGPTIPEAYGGAGLNYVGYGLIAREVERVDSGYRSMMSVQSSLVMLPIFAFG 117

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + + + PK+   E+                 GLTE   G+D   ++++ + +  G  
Sbjct: 118 SEAMKQKYLPKLARGEW-------------IGCFGLTEPDHGSDPGGMSTRARAVPGGYA 164

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +SP++D F++ A+ +       +   + D    GL    L  K+G R++ T
Sbjct: 165 LTGNKMWISNSPIADVFVVWAKDDAGE----IRGFVLDKGAKGLSAPALHGKVGLRTSIT 220

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
            E+     F         +   V  +K     L+SA   ++   +  AE     A  Y  
Sbjct: 221 GEIVMDQVFCPEEN----AFAQVRGLKGPFTCLNSARYGIAWGAMGAAEDCYARARQYVL 276

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    ++++ +AD+A DI+       RL    D+  +       A  +  + 
Sbjct: 277 DRKQFGRPLAANQLIQKKLADMATDISLGLQGVLRLGRMKDDGTA-------APEVTSLL 329

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +   +
Sbjct: 330 KRNNCGKALDIARTARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAI 387


>gi|170702656|ref|ZP_02893523.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132433|gb|EDT00894.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 609

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 100/577 (17%), Positives = 198/577 (34%), Gaps = 94/577 (16%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +   +D+L    +  +     +  + +    E + +      A   +   P+       
Sbjct: 15  YDWLDADAL--GALPRYAEHSRETFDAVLDTSERIAADLFAPHAARGDREEPRF-----D 67

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           GER   +   P     +R     GL  +  D +F  +   +  +  +   +  A +    
Sbjct: 68  GERVTLI---PEVEPAVRAFAAAGLIAAGQDEAFGGMRLPKLVEAASFLFFQAANIATAA 124

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +V +A+++    +P     +A              P  +      + L+E + G+ 
Sbjct: 125 YPFLTVANANLLLAHGSPAQIDAFA-------------RPELEGRFFGTMCLSEPQAGSS 171

Query: 211 IAAITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--------- 252
           ++ I ++            Y ++G+K ++S    +       ++LA++            
Sbjct: 172 LSDIVTRADFECASPLGPRYRITGNKMWISGGEHELAENIVHLVLAKIPDEQGRLLPGTR 231

Query: 253 -VGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFS-----------NT 294
            +  F+VP+ L        G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKYLPADDGAARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPQGRAGA 291

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------- 345
            G+L+G+ N     +  M     +     +V+        A+ YAR R            
Sbjct: 292 IGYLVGEPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKD 351

Query: 346 ----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARI 395
                  ++  P ++R +      +    AL    A   DEA++      R+E A    I
Sbjct: 352 AAAPQAPIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDEARAHDEAAVRAEAAQLLDI 411

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           + PI K W  +   A    A++  GG GY  +  + R YR++  N I  G+     LD+L
Sbjct: 412 LTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYPVERLYRDNRLNPIHEGTHGIQALDLL 471

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE--------- 506
               K       L  TL+  +G++  +      D+ S           L E         
Sbjct: 472 G--RKVGQDDGALLRTLDARIGATVLRARAADGDARSHADALAQRWARLVELTRALAALD 529

Query: 507 --KIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541
             ++ LA+++  L   G   +A ++L+     + H +
Sbjct: 530 DPQVRLANASVYLEAFGHLVVAWLWLDVTLAAHGHDS 566


>gi|332030391|gb|EGI70098.1| Glutaryl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior]
          Length = 414

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 62/312 (19%), Positives = 114/312 (36%), Gaps = 35/312 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  S   + +  +    + + PK+ S E                  GLTE   G+DI A+
Sbjct: 122 SSLSIGAIYMFGSNAQKERFLPKMVSGE-------------KIGCFGLTEPNHGSDIGAM 168

Query: 215 TSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLC 271
            ++    S            W  +SP++D  I+ A+ + G++  F++ R   + + + L 
Sbjct: 169 ETRAIHDSKQKVYKLNGSKTWITNSPVADVLIVWAKCDDGQIRGFIIER---EAAGDRLS 225

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +++ K   R++ T  +   N        LNV             L++A   ++   + 
Sbjct: 226 TPKIEGKFSLRTSITGMILMDNVIVPEENLLNVQGLKG----PFSCLNNARYGIAWGALG 281

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AEA       Y   R      L    ++++ + D+  DIA       R+    DE K  
Sbjct: 282 AAEACLNIARSYTLERKQFKRPLAANQLVQKKLVDMMCDIAIGLQACLRVGRLKDENK-- 339

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 A  M  I K      A  +   A + +GG+G  +E  + RH       +   G+
Sbjct: 340 -----LAPEMISIIKRNSTVKALEIARNARDMLGGNGISDEYHVIRHMMNLETVNTYEGT 394

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 395 SDIHALILGRAI 406


>gi|46137383|ref|XP_390383.1| hypothetical protein FG10207.1 [Gibberella zeae PH-1]
          Length = 638

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 122/579 (21%), Positives = 210/579 (36%), Gaps = 90/579 (15%)

Query: 24  ALNQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
              +PP+    N +  D          L  +    V  E+  LG+ VLS         A 
Sbjct: 10  FFQKPPVL--KNQFYDDVAFQRCFKLFLPKHIIRQVEAEVTALGDDVLSDEVFSWITDAE 67

Query: 79  YNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            N P L        G+    +     W  L    +  G   + +D  + P  R      +
Sbjct: 68  RNKPYLKGSGRDVFGQWKGDLVTGEGWRGLQNFGLSRGFVAAGYDTEYGPFAR----AYQ 123

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAP--KIFSREYDPTNKAPM 191
             R+ L     A      ++   +   L T   +P + K      +           +  
Sbjct: 124 FLRIQLWTPSCANVGCPSAMQDGAARLLQTHLMSPELSKRLTDTQRRVFENAFQHLTSRD 183

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQG--QKISD------------GIYCLSGHKWFLSS 237
              +   G  +TE+ GG+D++   +    Q ISD            G + +SG KWF S+
Sbjct: 184 ASYAWTSGQWMTERTGGSDVSLTETTAIHQPISDLGLASKIEDIPLGPWSISGFKWFSSA 243

Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSP--------------NGLCYQRLKNKIGNR 282
             S   ++LA+  +G +  F+ P    D                 NG+  QRLKNK G +
Sbjct: 244 TDSRMTVLLARTSKGGLSTFIAPMYKHDPHALTATGQSKENGENLNGVRIQRLKNKSGTQ 303

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           S  T EL   +   +L+G        + ++  L  + S++ +V  +   LA A  YAR R
Sbjct: 304 SLPTAELVLEDMRAWLVGQEGHGIQEIANVLTLTRVHSSVSAVGYLGRGLAIARAYARVR 363

Query: 343 HVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------------- 384
            V  G      L +  +  R ++ I+ +      LS   ++    ++             
Sbjct: 364 EVGAGRGARMKLTESSLHMRTLSKISCEYRGLMLLSMFTSHVLGVSEHGVSSTSSLSPAL 423

Query: 385 -----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI----EER-SIARHY 434
                S+   A   R++  +TK + CK +  ++   ME +GG GY+    +E  +IAR +
Sbjct: 424 ETLTPSKQHAAPLVRVVTQLTKAYICKASVQLLFSCMESLGGVGYLANEEQEYLNIARLH 483

Query: 435 RESPANSILLGSGNAMVLDVLNLL---EKGTNLFEQLFSTLEQDLGSSGK---------- 481
           R+     I  G+ + +  D L  L   + G    + L   + + + S GK          
Sbjct: 484 RDCAVLPIWEGTTDVLSTDFLRALKHTKGGREALDALEDFVRRGITSQGKIPQPQGWDPL 543

Query: 482 KVITILRDSI--SLCKEDKGLARFLTEKIALASSAAALY 518
           +    LR  I      +  G AR +   +A    +  L+
Sbjct: 544 EAWKELRQRIESESLTDLMGDAREVLWGVADILVSILLF 582


>gi|71655817|ref|XP_816465.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881596|gb|EAN94614.1| hypothetical protein Tc00.1047053510121.40 [Trypanosoma cruzi]
          Length = 472

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 32/316 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E             +    GLTE   G+D  ++
Sbjct: 184 SSLVMHPIYAFGSDAQKQRFLPKLATGE-------------LIGCFGLTEPNAGSDPMSM 230

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +K++ G        W  S+P++D  ++ A++            + +    G   +R
Sbjct: 231 TTRARKVAGGYSLSGCKTWITSAPLADIAVVWAKLHDTNKIAG---FIVERDFKGFATER 287

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           ++ K+  R++ T  +   N        L  +TG          L SA   ++   V  AE
Sbjct: 288 IEGKLSLRTSCTGMIVLDNCIVPEENVLPHATGLKAPFN---CLSSARYGIAWGVVGAAE 344

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y+  R   G  +    +++  +AD   +I  A     R     DE K     
Sbjct: 345 TCFNIARDYSLERKQFGKSIASMQLVQAKLADAVTEITLAMQSCLRAGRLKDEGK----- 399

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              +  +  + K    + A  +     + +GG+G  +E  + RH           G+ + 
Sbjct: 400 --LSHQVISMLKRNNTRKAIEIARAMRDILGGNGISDEYHVMRHVCNLETVLTYEGTYDI 457

Query: 450 MVLDVLNLLEKGTNLF 465
             L +   +  G + F
Sbjct: 458 HGLILGRSIT-GMSAF 472


>gi|110833694|ref|YP_692553.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2]
 gi|110646805|emb|CAL16281.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2]
          Length = 595

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 93/510 (18%), Positives = 177/510 (34%), Gaps = 62/510 (12%)

Query: 68  CTAQELARM--ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
            TA++LAR   AN+N   L           KV   P         I  G   S       
Sbjct: 43  DTAEKLAREKFANHNA--LSDKEEPAFVDGKVVMRPEVKEAFDAYIRAGFLSSRARYEEG 100

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +   +        ++      +   +  +  +A+++       +   +           
Sbjct: 101 GMQLPEIAAAACKGMFTCVNPSSTGYVFLTAAAANVIRNFGNDTLKARFLE--------- 151

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241
               PM        + LTE   G+ +  I ++     +G Y + G K F+S   ++    
Sbjct: 152 ----PMMAGRFTGTMALTEPHAGSSLTDIRTRAVPQDNGSYRIKGSKIFISGGENELADN 207

Query: 242 -AFIMLAQVEGR-VGCFLVPRLLEDG----------SPNGLCYQRLKNKIGNRSNATVEL 289
              ++LA++ G  VG   +   +               N +    L +K+G R   +  L
Sbjct: 208 IVHLVLAKIPGGPVGVKGISLFVVPKYRLDNNGHPDVRNDVILAGLIHKLGYRGTTSTAL 267

Query: 290 EF---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F    +  G+L+G+ +     +  M     L     +          A+ YAR R    
Sbjct: 268 SFGDADDCHGYLVGEAHQGLRYMFQMMNEARLGVGFGAGLLGYRGYRFALDYARDRRQGR 327

Query: 347 GI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE----AKSRSEEAA 391
                        LI+   +KR +        AA A+S       D+     ++ S+EA 
Sbjct: 328 HPDDADFSKPQVPLIEHADVKRLLLTQKAYAEAAIAMSLYGYRLVDDIETGNETTSKEAE 387

Query: 392 YARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               +  P+ K W  +        A++  GG+GY  E  + + +R++  N I  G+    
Sbjct: 388 LLLDLLTPVLKTWPSEFGVRANDMAIQVFGGAGYTREYPVEQVWRDNRLNPIHEGTTGVQ 447

Query: 451 VLDVLNLLE-----KGTNLFE-QLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503
            LD+L         KG  L   ++ + +      + K +   L+  + L ++  + +   
Sbjct: 448 GLDLLGRKVWVNNGKGLVLLASRIMADVLATANENCKPMAGALQAMLPLIEKATQAVGNQ 507

Query: 504 LT---EKIALASSAAALYRAGMNDIADVFL 530
           +     +IAL+++ A L   G    A ++L
Sbjct: 508 MASAGARIALSNANAYLQLLGQVVAAWMWL 537


>gi|109900292|ref|YP_663547.1| glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
 gi|109702573|gb|ABG42493.1| Glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 394

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 140/389 (35%), Gaps = 49/389 (12%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQ 145
           +G  GE +D+         ++      GL  S   + +    V   ++ + A  +  +  
Sbjct: 46  HGNRGEHFDR--------DIMYEMGELGLLGSTLPQKYGCAEVNHVSYGLIAREVERVDS 97

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   S      +    +    + + PK+ S E+                 GLTE 
Sbjct: 98  GYRSAMSVQSSLVMFPIYAFGSEAQKQRYLPKLASGEW-------------VGCFGLTEP 144

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D A++ +Q +++  G        W  +SP++D F++  ++ G +  F++     + 
Sbjct: 145 NSGSDPASMLTQAKEVDGGYCLNGSKMWITNSPIADVFVIWGKLNGAIRGFIL-----EK 199

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAI 322
           +  GL   +++ K   R++ T E+   + F  +   L D+    GP         L+ A 
Sbjct: 200 NMQGLSAPKIEGKFSLRASVTGEVVMQDVFVPVENILPDVEGLKGP------FSCLNKAR 253

Query: 323 MSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
             ++   +  AE        Y   R      L    ++++ +AD+  +I+       +  
Sbjct: 254 YGIAWGSLGAAEFCWHQARQYCLDREQFSRPLAANQLIQKKLADMQTEISIGLLACLQAG 313

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D         A       + K   C  A  +   + +  G +G  +E  I RH    
Sbjct: 314 RLMDTN-------ALPPEAISLIKRNSCGKALDIARTSRDMHGANGISDEFHIIRHVLNL 366

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A +   G+ +   L +L   + G + F 
Sbjct: 367 EAVNTYEGTHDVHAL-ILGRAQTGLSAFA 394


>gi|321461401|gb|EFX72433.1| hypothetical protein DAPPUDRAFT_110684 [Daphnia pulex]
          Length = 392

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 27/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   G+           +    A           A +        S       +
Sbjct: 47  KEIWEKAGSCGMLGINIPAEHGGIGGSFADACIVMEEQGYASVNGPAFHLHSDIIMPYFS 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P + +                   + +TE   G+D+  I S  +K   
Sbjct: 107 KYGSEEQKQKYIPDMTAG-------------KKISAIAMTEPDAGSDLQGIKSFARKDGS 153

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             Y L+G K F+++   +D  +++A    E +     +   L D    G     L  KIG
Sbjct: 154 D-YILNGSKMFITNGWLADVVVVVAVTNKEAKSAAHGISLFLVDADTPGFKKSWLMKKIG 212

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             ++ T  L F +       LLG+ N     + +      L   + + +       E   
Sbjct: 213 MGASDTAGLFFEDVRLPASALLGEENKGFYYLMNELPQERLTIGVHACAHSEFMFEETKQ 272

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y  +R   G  L +   ++  +A++  +I  A A         D+  +  EE      MA
Sbjct: 273 YVMQRKAYGKTLSNLQTIQHKLAEMKTEICVARAF-------IDQCIALHEEQQLDAQMA 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K W  ++   + A+ ++  GG+GY+ +  IAR Y ++   +I  GS   +   +   
Sbjct: 326 CMAKIWASELENKIAAQCLQLHGGAGYLYDTPIARAYLDARVQTIYGGSNEVLKDLIARQ 385

Query: 458 L 458
           +
Sbjct: 386 I 386


>gi|163849086|ref|YP_001637130.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222527059|ref|YP_002571530.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163670375|gb|ABY36741.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450938|gb|ACM55204.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl]
          Length = 394

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 141/369 (38%), Gaps = 30/369 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      L+ R    G+          P        + AA L          +  
Sbjct: 45  WERAEFP---FELIPRIAELGIVGGTIQGYGCPGFSSVEVGLIAAELARGDGSVGTFVGV 101

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A   +    + W P              M +        LTE   G+D A 
Sbjct: 102 TSGLAMGAIAACGSEEQKQRWLP-------------AMARLEKIGAFALTEPYVGSDAAH 148

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLC 271
           I +  +++S G       +W  ++  +D  ++ AQ E  GR+G FLV     +    G  
Sbjct: 149 IRTTAKRVSGGYLLNGAKRWIGNATFADVIVVWAQDEETGRIGGFLV-----EKGTPGYR 203

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
             +++ KI  RS    ++   N F      L ++    +   IL       A  +V   +
Sbjct: 204 ATKIEGKIAKRSVINADITLENVFVPEENRLPLARSFRDTANILKNTRYGVAWEAVGHAQ 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ Y  +R   G  +    ++++ +  +  D+ A   +++RL+   DE +S+  E
Sbjct: 264 AAYELALEYTLQREQFGRPIAGFQLVQQKLVHMLGDLTAIQLMAWRLSKLRDEDESQITE 323

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 MA + K +C   A  ++A   E +GG+G + +R IARH+ +  A     G+   
Sbjct: 324 G-----MASLAKQYCAAKARQIVALGREVLGGNGILLDRHIARHFADIEAVYTYEGTNEI 378

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 379 NTLVVGREI 387


>gi|73541102|ref|YP_295622.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72118515|gb|AAZ60778.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 618

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/520 (17%), Positives = 180/520 (34%), Gaps = 88/520 (16%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           + + P+           + V   P     L+     GL  +  D     +      +   
Sbjct: 60  DQHEPEFDG--------ETVTIIPEVGTALKAFCEAGLMAAGQDYEIGGMQLPVLVEKAG 111

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              +  A +        ++ +A+++    TP     +               P  +    
Sbjct: 112 FAYFKGANVGTSSYPFLTIGNANLLLTHGTPAQIDTFVK-------------PEMEGRFF 158

Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQ 248
             + L+E + G+ ++ +T++ +          Y L G+K ++S+   +       ++LA+
Sbjct: 159 GTMCLSEPQAGSSLSDVTTRAEYEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAK 218

Query: 249 VEG----------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS- 292
           + G           +  F+VP+ L +     G  N +    L +K+G R      L F  
Sbjct: 219 IPGPDGKLVPGVKGISLFIVPKYLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGE 278

Query: 293 ----------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                        G+L+G+       +  M     +   + +V         A+ YAR R
Sbjct: 279 GMKYKPAGKAGAIGYLVGEPGKGLACMFHMMNEARIGVGLGAVMLGYTGYLHAVDYARNR 338

Query: 343 HVSGGI--------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              G                L++   ++R +      +    AL+   A   DE ++ S 
Sbjct: 339 PQ-GRPVGPGGKDPASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASA 397

Query: 389 EAA-------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +A           I+ PI K W  +        A++  GG GY  E ++ + YR++  N 
Sbjct: 398 DAVKHEQLSLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNP 457

Query: 442 ILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ----DLGSSGKKVITILRDSISLCK 495
           I  G+     LD+L   ++ K    F  L   + +     L S  K++ +  R   +   
Sbjct: 458 IHEGTHGIQGLDLLGRKVVMKDGAAFRLLGERVRETCECALSSGDKELGSQARALGAAAT 517

Query: 496 EDKGLARFL----TEKIALASSAAALYRAGMNDIADVFLE 531
               + + L       + LA+++  L   G   +A ++LE
Sbjct: 518 RLAEVTKVLWSAGDANVTLANASIYLEAFGHVVVAWIWLE 557


>gi|304312807|ref|YP_003812405.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301798540|emb|CBL46770.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 390

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 147/408 (36%), Gaps = 41/408 (10%)

Query: 66  LSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           LS   +++   A +    QL        R +   F P  +  +      GL  S     +
Sbjct: 17  LSAEEKQIQASARHYAQGQLAPRVRDAFRHE--HFDPVIYQEMG---ALGLLGSTLPSEW 71

Query: 125 EPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   ++ + A  +  +       L   S      +           + PK+   E+
Sbjct: 72  GCAGISHTSYGLIAREIERVDSGYRSALSVQSSLVMYPIFAFGNDEQRARYLPKLAKGEW 131

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                             LTE   G+D A + +  + +  G        W  ++P++D  
Sbjct: 132 -------------IGCFALTEPNHGSDPAGMKTNAKAVPGGYELTGSKLWITNAPIADVM 178

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A++EG++  FL+     + +  GL    ++ K+  R++ T  L F + F      L 
Sbjct: 179 IVWARLEGKLAGFLL-----EKNMPGLSAHTIEGKLSLRASITGGLSFDSVFVPEAQRLP 233

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRA 358
           ++ G          L+ A   ++   +  AEA  +A R     R   G  L    ++++ 
Sbjct: 234 LAAGLAA---PFACLNKARFGIAFGSLGAAEACWHAARDYVCLREQFGKPLAANQLIQKK 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+  +IA     + R+    D+    SE       +  + K   C  +  +  EA + 
Sbjct: 291 LADMQTEIALGLNAALRMGRLMDDDACPSE-------LISLMKRNNCGKSLQIAREARDM 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G  +E  I RH       +   G+ +   L +L   + G   F+
Sbjct: 344 LGANGISDEYPIMRHQLNLETVNTYEGTHDIHAL-ILGRAQTGHQAFK 390


>gi|300722664|ref|YP_003711954.1| xenocoumacin synthesis acyl-CoA dehydrogenase [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629171|emb|CBJ89767.1| Acyl-CoA dehydrogenase involved in xenocoumacin synthesis
           [Xenorhabdus nematophila ATCC 19061]
          Length = 383

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 127/354 (35%), Gaps = 31/354 (8%)

Query: 114 GLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           GL  +I  + +        ++      +          L   +      +  + +    +
Sbjct: 46  GLLGAILPKEYGGQGIDPLSYGYLTEEIGKGCNSTRALLTVHTSLVGETIVKLGSQIQKE 105

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P              M +        L+E   G+D  AI ++ +   +G       K
Sbjct: 106 KYLP-------------AMARGEKIACFALSEPEAGSDANAIKTRYEVTENGFRINGNKK 152

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W   S ++D F++ A+ E +V  F+V   +E     GL  + +   + +R     EL F 
Sbjct: 153 WITYSGIADLFLIFAKCEEKVSAFIVEFGVE-----GLTRKPMSGLMASRGAYLSELNFD 207

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGG 347
           N        +    G          L     S++   V++A A     + YAR+R   G 
Sbjct: 208 NVEIPKESLVGRE-GEGFSFVANTALYFGRYSIAWAGVAIAHAAMEEMVTYARKRKQFGQ 266

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  IAD A    AA A   ++ +  ++          A +   I KY    +
Sbjct: 267 KIAQHQLIQGIIADSATAFYAAKAACEKIGHMRNQGDHN------AIMETNIAKYNSSAV 320

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           A  V   A++ +GG+G   +  + R YRE+    I+ G+     + +     +G
Sbjct: 321 AMLVANNAVQVLGGNGLSNKYPVERLYREAKVLEIIEGTNQIQQMLISQHALRG 374


>gi|255531117|ref|YP_003091489.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter
           heparinus DSM 2366]
 gi|255344101|gb|ACU03427.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM
           2366]
          Length = 453

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/419 (17%), Positives = 144/419 (34%), Gaps = 40/419 (9%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQEL-----ARMANYNTPQLHAYGPGGERWDKVEFHPA 102
                 +  +   LGE  L    + L     A +     P ++ Y      W K EF   
Sbjct: 60  KRELPPIEGDFYQLGEEALKDEDRALQLKVRAFLEKEVKPVVNKY------WLKAEFP-- 111

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              L+ +     +    +     P        + A  +  +    +      S  +   +
Sbjct: 112 -FELIPKIAELNICGLTYQGYGCPGKSNLMEGMLAMEMARVDTSMSTFFGVQSGLAMGAI 170

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKI 221
            L+ +    + W P              MQ+  +    GLTE   G+ +A  +T+  ++ 
Sbjct: 171 YLLGSEAQKQQWLPD-------------MQQMKIIGAFGLTEPEVGSGVAGGLTTTAKRQ 217

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +        KW  ++  SD  ++ A+             L      G   +++++K+  
Sbjct: 218 GNKWLLNGQKKWIGNATFSDITVIWARDVDDNQVKG---FLVRKGSKGFAVEKMQDKMAL 274

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYA 339
           R      +  +N        L  +    +  K+  +     A  +V   R +   A++Y 
Sbjct: 275 RIVQNGLITLTNCEVDEEDRLQNANSFKDTAKVLKMTRAGVAWQAVGCARGAYESALNYT 334

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  +    +++  + ++  ++ A   L FRL+   D+     E A+ A      
Sbjct: 335 RTRKQFGKPIASYQLIQNHLVEMLSNLTAMQTLCFRLSQLQDQGLLTDEHASLA------ 388

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +C      V++ A E +GG+G + E  +AR   ++ A     G+     L V   +
Sbjct: 389 -KVFCSMRTRDVVSRAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEINTLIVGRAI 446


>gi|196008093|ref|XP_002113912.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190582931|gb|EDV23002.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 357

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 139/385 (36%), Gaps = 46/385 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P++             E+HP    +L+     G+                A+ +    + 
Sbjct: 2   PRIVMSNRN------EEYHP---EILQEMGDLGILGCTISGYGCAGASSVAYGLITREIE 52

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            +       +   S      +    T    + + PK+ + +                  G
Sbjct: 53  RVDSSYRSTMSVQSSLVMHPINAFGTTEQKEKYLPKLATGQM-------------IGCFG 99

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D  ++ ++    +D   Y L+G K W  +SP++D FI+ A++EG++  F++ 
Sbjct: 100 LTEPNHGSDPGSMETRATFNTDKKCYVLNGTKSWITNSPVADLFIIWAKLEGKIRGFIL- 158

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318
               +    GL    +K K   R++ T ++   N         N     VE +K     L
Sbjct: 159 ----EKGMTGLSAPYIKGKFSLRASPTGQIVMENVEVP----ENNILPHVEGLKGPFSCL 210

Query: 319 DSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           ++A   ++   +  AE        Y   R   G  L    +M+  +A++  +I+      
Sbjct: 211 NNARYGIAWGALGAAEFCLDFVRQYTIDRKQFGRALASNQIMQLKMANMLTEISLGLQGC 270

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++    D+  +  E       M  + K   C  A  +   A + +GG+G  +E  + RH
Sbjct: 271 LQVGRLKDKNFATPE-------MVSMIKRNSCGKALEIARTARDMLGGNGICDEYHVIRH 323

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
                A +   G+ +   L +   +
Sbjct: 324 SMNLEAVNTYEGTHDIHALILGRAI 348


>gi|218675397|ref|ZP_03525066.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 394

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 128/370 (34%), Gaps = 38/370 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L +     GL        +        A+ + A  +  +       +   S      + 
Sbjct: 53  ELFKLMGQTGLLGVTLPEEYGAANASYVAYGLIAREVERIDSGYRSMMSVQSSLVIYPIF 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K + P + S               +    GLTE   G+D   + ++ +KI+ 
Sbjct: 113 AYGSDEQKKKYLPGLVSG-------------DLIGCFGLTEPDAGSDPGGMKTRAEKIAG 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+ E       +   + +    GL   ++  K+  R+
Sbjct: 160 GYRLRGSKIWISNSPIADVFVVWAKSEAH--NNEIRGFVLEKGMKGLSAPKIGGKLSLRA 217

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           + T E+   +       LL  ++   GP         L+ A   +S   +  AE     A
Sbjct: 218 SITGEIVMDSVEVTEDALLPGVSGLKGP------FGCLNRARYGISWGVMGAAEDCWFRA 271

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    + ++ +AD+  +I      S R+    DE +        A  
Sbjct: 272 RQYGLDRKQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDEHR-------MAPE 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L
Sbjct: 325 MVSIVKRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-IL 383

Query: 456 NLLEKGTNLF 465
              + G   F
Sbjct: 384 GRAQTGLQAF 393


>gi|254233599|ref|ZP_04926925.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis C]
 gi|124603392|gb|EAY61667.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis C]
          Length = 357

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 124/344 (36%), Gaps = 34/344 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTLFGTEEQRRTYLPPMASGELRTT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           EA  A       K +  ++A  +   A+   GG GY  E  + R
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVER 356


>gi|242010954|ref|XP_002426222.1| glutaryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
 gi|212510285|gb|EEB13484.1| glutaryl-CoA dehydrogenase, putative [Pediculus humanus corporis]
          Length = 416

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 123/350 (35%), Gaps = 37/350 (10%)

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWA 175
           I+ +   P + +          Y  A +        SV S+ +   +    + +  + + 
Sbjct: 86  IFHKEIFPEMGELGLLGCTLEGYGCANMSYWISFCYSVQSSLVMFPIHAYGSEKQKEKYL 145

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKW 233
           P++              K  +    GLTE   G+D + + ++    K +          W
Sbjct: 146 PRL-------------AKGELIGCFGLTEPNHGSDPSGMETKAVYNKNTKTYKLSGSKTW 192

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +SP++D  ++ A+ +       +   + +    G+   +++ K   R++AT  +   +
Sbjct: 193 ITNSPVADIVVIWARCDDGK----IRGFILEKEMKGVSLPKIEGKFSLRASATGMILLDD 248

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348
                   L  + G          L++A + +S   +  AE     A  Y   R   G  
Sbjct: 249 VEVSEEQVLPKAEGLKA---PFSCLNNARLGISWGALGAAEFCLESARQYVLDRKQFGRP 305

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +AD+  +I+        +    ++     E       M  + K      +
Sbjct: 306 LACNQLIQKKLADMLTEISIGLQACLHVTRLKEKNMETPE-------MISMLKRNSTGKS 358

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   A + +GG+G  +E  I RH     A +   G+ +   L +   +
Sbjct: 359 LEIARVARDMLGGNGICDEYHIIRHVMNLEAVNTYEGTHDIHALILGRAI 408


>gi|188581438|ref|YP_001924883.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179344936|gb|ACB80348.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 562

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 144/368 (39%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGLTIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P+I S +  PT                TE   G+D+A++ ++  K  D +
Sbjct: 274 GTEEQKQRFLPRIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKEGD-V 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + ++G+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKITGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGDDENPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F          L      G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEGFEVPAGNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYPISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|256380956|ref|YP_003104616.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255925259|gb|ACU40770.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 404

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 132/390 (33%), Gaps = 40/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P    ++R +   GL+      ++       +  I    L+       
Sbjct: 29  PAAAEWDEREETP--WPVIREAAKIGLYGFESLATWFADPVGLSLPIATEELFWGDAGIG 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             LM   +  A ++A    P    +W P+ F  E DP                 +E + G
Sbjct: 87  LSLMGTGLAVAGILA-SGEPEQLAEWVPECFGDESDPQ----------VAAFCASEPQAG 135

Query: 209 TDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           +D+A   ++       D         W  +  +++  ++ A V+  +G       +    
Sbjct: 136 SDVAGYRTRAVYDGATDEWVLNGQKSWATNGGIANVHVVTAVVDPALGARGQAGFVVPPG 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---------------LLGDLNVSTGPVED 311
             GL       K G R++ T ++   +                            G    
Sbjct: 196 TRGLSSPAKVRKHGMRASHTADVFLDDVRVPGRCLLGGRERLEARLARAREGQRAGVQGA 255

Query: 312 MKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           M            M+V   R +   A+ YA+ R   G  +++   +   +A++ ++I AA
Sbjct: 256 MATFESTRPVVGAMAVGVARAAHEYALAYAKERQAFGRRIVENQSIAFDLANVRVEIDAA 315

Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             L +R A         +  E +  ++ A     W  + A       ++ +GG+GY  + 
Sbjct: 316 RLLVWRAAWMGRNNVPFTAGEGSMCKLKAAEVAVWATERA-------IQVLGGAGYTRDH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + R +R++   +I  G+     L V   +
Sbjct: 369 PVERMHRDAKLFTIFEGTSEIQRLVVARAI 398


>gi|322708425|gb|EFZ00003.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 540

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 141/407 (34%), Gaps = 28/407 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L    +E     N   P +  +       +++     +  + RR    GL    +   +
Sbjct: 142 ALRAEVREWME--NEIEPNVTEWDEAKRVPEEI-----YKEMGRRGYLAGLLGVKYPTEY 194

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSRE 182
            P   K          + M   +            +++       P +      K  S+ 
Sbjct: 195 VPNGVKSVPTESWDLFHEMLLTDELSRAGSGGFVWNLIGGFGIGCPPIM-----KFGSQA 249

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD 241
                   +      + L +TE   G+D+A +T + +   DG  + ++G K ++++ +  
Sbjct: 250 LKDRIMPGILAGDKRVCLAITEPDAGSDVANLTCEARLSEDGKHFIVNGEKKWITNGIWA 309

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +   A   G  G   V  LL +  P G+  +R+ +  G  S+ T  + F +    +   
Sbjct: 310 DYFTTAVRTGGEGMNGVSLLLIERGP-GVSTRRM-DCQGVWSSGTTYITFEDVKVPVENL 367

Query: 302 LNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L       G +        +   I  +   RV   E++ YA +R   G  LI+ PV++  
Sbjct: 368 LGKKDKGFGVIMTNFNHERIGIIIQCLRFSRVCFEESVKYANKRRTFGKKLIEHPVIRMK 427

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAM 416
           +A +A  I A+      L N   + +   E  A  R+  PI                EA 
Sbjct: 428 LAHMARQIEASYNW---LENMIYQCQKMGEHEAMLRLGGPIAGLKAQSTVTFEFCAREAS 484

Query: 417 ECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG  Y        + R YR+  A +I  GS   M+   +    K
Sbjct: 485 QIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSMRQSLK 531


>gi|332262576|ref|XP_003280338.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like isoform 2 [Nomascus leucogenys]
          Length = 408

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 131/384 (34%), Gaps = 46/384 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   +    + W     S                     L+E   
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSG-------------DKIGCFALSEPEP 159

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-----LVPRLL 262
                         +  I+ L        SP +       +   RV         +   L
Sbjct: 160 SLLGP---------TGPIFALGQVGCPCPSPAATEVCTFPRSRQRVSGPELLREGISAFL 210

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSA 321
                 GL   + ++K+G R ++T  L F +          +   P    KI +  LD  
Sbjct: 211 VPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMG 267

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R 
Sbjct: 268 RIGIASQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMALALESARLLTWRA 327

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D  K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR+
Sbjct: 328 AMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRD 380

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
           +    I  G+     L +   L +
Sbjct: 381 ARITEIYEGTSEIQRLVIAGHLLR 404


>gi|332252999|ref|XP_003275640.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 438

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 128/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSVMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMQGLSAPRIQGKFSLRASATGMIIMDGVEAP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|119500832|ref|XP_001267173.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119415338|gb|EAW25276.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 541

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 134/381 (35%), Gaps = 22/381 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL  + +         +          + M   
Sbjct: 157 PYVTEWDEAKKVPDSVYKQMGERGYLAGLLGTKYPTQHTRNRVQSVAPENWDLFHEMLLT 216

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P + K     +  R         +      I L +TE
Sbjct: 217 DELSRAGSGGLVWNLIGGFGIGCPPLVKFGKKPLVDR-----ILPGILAGDKRICLAITE 271

Query: 205 KRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 272 PDAGSDVANLTCEAKLSPDGRHYIVNGEKKWITNGVWSDYFTTAVRTGGPGMNGISVLLI 331

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 332 EREAGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGI 390

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I A       L N  
Sbjct: 391 VIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQIEATYNW---LENII 447

Query: 381 DEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +S  E  A  ++   I   K            EA +  GG  Y        + R YR
Sbjct: 448 YQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYSRGGQGGKVERLYR 507

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +  A +I  GS   M+   + 
Sbjct: 508 DVRAYAIPGGSEEIMLDLSVR 528


>gi|71413730|ref|XP_808993.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70873305|gb|EAN87142.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 472

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 32/316 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E             +    GLTE   G+D  ++
Sbjct: 184 SSLVMHPIYAFGSDAQKQRFLPKLATGE-------------LIGCFGLTEPNAGSDPMSM 230

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +K++ G        W  S+P++D  ++ A++            + +    G   +R
Sbjct: 231 TTRARKVAGGYSLSGCKTWITSAPLADIAVVWAKLHDTNKIAG---FIVERDFKGFATER 287

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           ++ K+  R++ T  +   N        L  +TG          L SA   ++   V  AE
Sbjct: 288 IEGKLSLRTSCTGMIVLDNCIVPEENVLPHATGLKAPFN---CLSSARYGIAWGVVGAAE 344

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y+  R   G  +    +++  +AD   +I  A     R     DE K     
Sbjct: 345 TCFNIARDYSLERKQFGKSIASMQLVQAKLADAVTEITLAMQSCLRAGRLKDEGK----- 399

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              +  +  + K    + A  +     + +GG+G  +E  + RH           G+ + 
Sbjct: 400 --LSHQVISMLKRNNTRKAIEIARAMRDILGGNGISDEYHVMRHVCNLETVLTYEGTYDI 457

Query: 450 MVLDVLNLLEKGTNLF 465
             L +   +  G + F
Sbjct: 458 HGLILGRSIT-GMSAF 472


>gi|284035946|ref|YP_003385876.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
 gi|283815239|gb|ADB37077.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74]
          Length = 402

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 120/344 (34%), Gaps = 27/344 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           G+  +     +      Q ++ +    +          +   +      +    +    +
Sbjct: 72  GVFGATIPTEYGGGGLDQISYGLMTQEIERGDSGMRSCVSVQNSLVMYPIWAFGSEAQRQ 131

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P++ + E             +    GLTE   G+D   + S   + SD         
Sbjct: 132 KYLPRLATGE-------------LIGCFGLTEANHGSDPGGMESNFIERSDYYLLNGSKL 178

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++ ++D  I+ A+ +       V  L+ +    G     +KNK   R++ T EL F 
Sbjct: 179 WITNANIADIAIVWARNDQGK----VRALIVERGMEGFSTAEIKNKWSLRASTTGELIFQ 234

Query: 293 NTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           +        L  S G    +K L       +  ++         A  YA  R   G  + 
Sbjct: 235 DVQVPKENILPDSFGLKSALKCLEQARYGISWGALGAAMECYEVARRYALERIQFGKPIA 294

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              ++++ +A++  DI     L +RL    +E ++   + + A+           +MA  
Sbjct: 295 SFQLVQKKLAEMLTDITQGQLLCWRLGVLKNEDRATVAQISMAKRS-------NVEMALR 347

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           V  EA + +G  G   E  I RH     + S   G+ +  +L +
Sbjct: 348 VAREARQILGAMGISGEYPIMRHLMNLESVSTYEGTHDIQLLIL 391


>gi|304393206|ref|ZP_07375134.1| short-chain specific acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303294213|gb|EFL88585.1| short-chain specific acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 393

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 137/396 (34%), Gaps = 47/396 (11%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   ++       + ++++  GL+ +     F                +L
Sbjct: 23  ELYPHEAEVERTGHLDM-DLVREIQQKAMEAGLYAANIPEEFGGGGLDT-------LTWL 74

Query: 143 MAQLEAGHLMSPSVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           + + E G        +A      +    T    K +               P  K     
Sbjct: 75  LYEKELGRANYALHWTAVARPSNILCAGTEDQRKRYLE-------------PCLKGETWD 121

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ--------- 248
            L +TE   G+D+  + +  ++     + L+G K F+S      F I   +         
Sbjct: 122 CLAMTEPGAGSDLRGMKATAKQDGTD-WILNGTKHFISHADIAGFAICFMKSGEVETPRG 180

Query: 249 VEGRVGCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNV 304
            +  +  F V +  E G    G   +   N + +R      LEF +       +LG++  
Sbjct: 181 TKAEITAFFVDKFAEGGGTTPGFTVRDGYNNVSHRGYTNAVLEFDDCRVPAENVLGEVGK 240

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                 D      L  A   +     +   A+ +A  R   G  +     +   +AD+A+
Sbjct: 241 GFEVANDWLGATRLQVAATCLGRADRAFQHALSFATERKQFGQQIGKFQGISFKLADMAM 300

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++ AA  L++   + FD       + A A++ A        ++   +  EA++  GG G 
Sbjct: 301 ELKAAELLTWEAGSKFDTGGCTDMDMAMAKLKA-------SEVLAMIADEALQIHGGMGL 353

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++E  + R +R++    I  G+       +   L +
Sbjct: 354 MDELPLERIWRDARIERIWEGTSEIQRHIISRALLR 389


>gi|296271158|ref|YP_003653790.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093945|gb|ADG89897.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 392

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 129/399 (32%), Gaps = 48/399 (12%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +++ T +E   + +   P++  +   GE        P    L       GL       
Sbjct: 24  ERMIAHTVREF--VTDRILPEVAGWFERGE-------FP--RELATEFGELGLLGM--HL 70

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           S        A     A L L A        +      +   +    +    ++W P++ +
Sbjct: 71  SGYGCAGLNAVSYGTACLELEAGDSGLRSFVSVQGSLAMFPIWKYGSEEQKQEWLPRMAA 130

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V    GLTE   G+D A + +  ++            W  +  ++
Sbjct: 131 GE-------------VIGCFGLTEPDAGSDPAGMRTVARRDGSDWVLNGTKMWITNGSIA 177

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  I+ A+ +  V  F+V     D    G     +++K+  R++ T EL   N       
Sbjct: 178 DVAIVWARADEGVRGFIV-----DTKTPGFTANTVRHKMSLRASVTSELVLDNVRVPGDA 232

Query: 301 DLNVSTGPVEDMKILIYLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              V  G V     L  L+ A       +V   R     A+ Y   R   G  L    + 
Sbjct: 233 ---VLPGIVGLKGPLSCLNEARFGILFGAVGAARSCYEAALDYTLTRTQFGKPLAAFQLT 289

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+ + +  A  L+  L    D  +    + ++ +             A  V  EA
Sbjct: 290 QSKLADMLIRVNRAHLLALHLGRLKDAGELTPAQISFGKKDNVA-------QALHVAREA 342

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              +G +G   E  + RH     +     G+     L +
Sbjct: 343 RAMLGANGITLEYPVIRHMNNLESVYTYEGTNEVHTLVL 381


>gi|114052082|ref|NP_001039404.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
 gi|122142797|sp|Q2KHZ9|GCDH_BOVIN RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|86438384|gb|AAI12823.1| Glutaryl-Coenzyme A dehydrogenase [Bos taurus]
 gi|296485913|gb|DAA28028.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]
          Length = 438

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 125/363 (34%), Gaps = 34/363 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              ++      G+            V   A+ + A  L  +       +   S      +
Sbjct: 93  HREIISEMGELGMLGPTIQGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPI 152

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--K 220
               +    + + P++              K  +    GLTE   G+D + + ++ +   
Sbjct: 153 YAYGSEEQKQKYLPRL-------------AKGELLGCFGLTEPNHGSDPSGMETRARHNP 199

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            S          W  +SP++D  I+ A+ E       +   L +    GL   R++ K  
Sbjct: 200 SSRSYILSGSKTWITNSPVADLLIVWARCEDS----CIRGFLLEKGMRGLSTPRIEGKFS 255

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R+++T  +   +       + NV  G          L++A   ++   +  AE     A
Sbjct: 256 LRASSTGMIIMDDVEVP---EENVLPGVSGLAGPFGCLNNARYGITWGVLGAAEFCLHTA 312

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    ++++ +AD+  +I        +L    D+ K+       A  
Sbjct: 313 RQYTLDRIQFGVPLAKNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKA-------APE 365

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +  +A + +GG+G  +E  + RH     + +   G+ +   L + 
Sbjct: 366 MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHVMNLESVNTYEGTHDIHALILG 425

Query: 456 NLL 458
             +
Sbjct: 426 RAI 428


>gi|300712593|ref|YP_003738406.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126277|gb|ADJ16615.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 388

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 131/393 (33%), Gaps = 35/393 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +   AQ+ A+             P  E + +   +P    +L       L       
Sbjct: 13  ARDVKQEAQDFAQ---------QHIAPNAEEYYRTGEYP--WEILEAGQEAELVAQDITE 61

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +       A  +     +  A    G  +  +   + +V    T + H+++        
Sbjct: 62  DYGGRGFDIAEMLALVEEFFRADPGIGLTLRLASFGSQLVERHGTEKQHEEFL------- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +     GL ++E   G+D+A +T++ +K  D         W  ++  +D 
Sbjct: 115 ------RPVAEGKQITGLAVSEPETGSDLAGMTTRAEKDGDEWVLNGEKYWVGNAVEADW 168

Query: 243 FIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             + A+ +     +      +     +G   + +  K+  R++    + F N       L
Sbjct: 169 LTVYAKTDDSDHRYSNYSLFIVPTDTDGYEAEHIPEKMAFRASKQGHITFDNCRIPSQNL 228

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G  N     + +      +      +     ++ E   +   R   G  + D   ++  
Sbjct: 229 VGTENEGFYKLVEFFNDERVVVGGHGLGMAAAAIEETWEFVHDREAFGKNVSDFQAVQHD 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+ +D  +A A+++R AN     +  S   A       I K    + A       M+ 
Sbjct: 289 LADMRIDFESARAVNWRAANKALRGEDTSLWGA-------IVKTKSTETAVTCAERGMQL 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            GG   + +R IAR YR+     I  G+     
Sbjct: 342 HGGRSILTDRRIARIYRDCRIPVIYEGANEIQR 374


>gi|332671061|ref|YP_004454069.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
 gi|332340099|gb|AEE46682.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
          Length = 391

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 126/367 (34%), Gaps = 33/367 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
           + +L +    GL    + R +    R      +    L  + Q     L +     A  V
Sbjct: 39  YEILAQMGEMGLFGLPFPREYGGQDRDMFDLCLAVEELGRVDQSIGVTLEAGVGLGAMPV 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    ++W P + S                    GLTE   G+D     +   ++ 
Sbjct: 99  FRHGTDAQKEEWLPLLASG-------------RGLAAFGLTEADAGSDAGGTRTTA-RLE 144

Query: 223 DGIYCLSGHKWFLSSPMSDA---FIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQR 274
           DG + + G K F+++  +       + A       +       +  +L      GL    
Sbjct: 145 DGEWVIDGSKQFITNSGTRITRLLTITAVTGERVRDDGTRTKELTAILVPAGTPGLTVLP 204

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +K+G  ++ T  L F +       LLG                 +  A +     +  
Sbjct: 205 AYDKVGWHTSDTHPLRFEDLRVPEANLLGTRGRGFAQFIQALDEGRVAIAALCTGAAQGC 264

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA+ YAR R+V G  + +   +   IA +   + AA       A      +    EA+
Sbjct: 265 LEEAMRYARSRNVFGHPIGENQHIAFKIARMESRVHAARLAWQDAARRLVAGQPFKLEAS 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+++         + A     +A +  GG G + E ++ARHYR+S    I  G+    +
Sbjct: 325 LAKLL-------GSEAAMDNARDATQIFGGYGVLNENAVARHYRDSKILEIGEGTTEVQL 377

Query: 452 LDVLNLL 458
           + +   L
Sbjct: 378 MVIAREL 384


>gi|145221013|ref|YP_001131691.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315442015|ref|YP_004074894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145213499|gb|ABP42903.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315260318|gb|ADT97059.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 611

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 101/543 (18%), Positives = 193/543 (35%), Gaps = 73/543 (13%)

Query: 34  MNAYSS---DSLL-VALIANFP-SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
            N +     D  L     A      V + L  + +      A   A   + N P    + 
Sbjct: 13  FNLFEVLGVDKALGQGAYAELDVDTVTEMLGEMAKLAEGPVADSFAE-GDRNPPV---FD 68

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P       V    A+   +R     G                      A + +++    A
Sbjct: 69  PKTH---SVTLPEAFKKSVRAVTDGGWDKLSASEEIGGAALPSV-ISWALQEHILGANPA 124

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++ +     A +   + T    K WA     R +  T             + LTE   G
Sbjct: 125 VYMYAMGAGFADIFYHLGTDEQKK-WAKLAADRGWGST-------------MVLTEPDAG 170

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCF 256
           +D+ A  ++  +  DG + + G K F++S  SD        ++LA+ EG       +  F
Sbjct: 171 SDVGAGRTKAVQQPDGTWHIDGVKRFITSADSDDLFENIMHLVLARPEGAGPGTKGLSLF 230

Query: 257 LVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVST 306
            VP+        E G  NG+    +++K+G + + T EL          G+L+G+++   
Sbjct: 231 FVPKFHFDHETGEPGERNGVFVTNVEHKMGLKISTTCELSLGQHGTPAVGWLVGEVHDGI 290

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             + D+     +     +++ +      A+ YA+ R                  +   P 
Sbjct: 291 AQMFDVIEQARMMVGTKAIATLSTGYLNALAYAKDRVQGADLTQMTDKTAPRVTITHHPD 350

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYARI----MAPITKYWCCKM 407
           ++R++           AL    A   +   ++     E   A      M PI K    + 
Sbjct: 351 VRRSLMTQKAYAEGLRALYLFTATHQNAEMAKVVHGIEPDLAVRVNDLMLPIVKGVGSEQ 410

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL 464
           A A + E+++  GGSG++++  I ++ R++  +S+  G+      D      + +KG  L
Sbjct: 411 AYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVAL 470

Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARFLTEK-IALASSAAALYRAGM 522
                   +     +G   +   R  ++   ED +G+A  LT   +A     AA+Y+ G+
Sbjct: 471 AHVAGQIEQFVKAETGNGRLKAERALLATALEDVQGMAASLTGYLMASQEDQAAIYKVGL 530

Query: 523 NDI 525
             +
Sbjct: 531 GSV 533


>gi|114567356|ref|YP_754510.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338291|gb|ABI69139.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 379

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 118/367 (32%), Gaps = 36/367 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+++    G     +   +          +                +S +    + + 
Sbjct: 39  WDLIKKIKDLGWCGIQYPEKYGGSGNTYVEYVIMQIEMARVYCSTACTISVNGMLGANIM 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      + P+                         TE   G+D  A+ +   +  D
Sbjct: 99  KFATEEQKMKFLPEHL-------------NGDGIGSFAFTEASTGSDPNALRTTCVRDGD 145

Query: 224 GIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             + ++G K F+++     +   F    ++ G+    L+P+ +      G    R+ +K+
Sbjct: 146 E-WVINGEKVFITNASLPGLMGIFCKDVEMGGKCTNILIPKGI-----KGYSIPRIYDKM 199

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVSGMRVSLA 333
           G       ++   N                +  ++L+       L     +V   + +L 
Sbjct: 200 GMHGLEVCDVLLDNVRVPYENTTGGEAMRGKGFEVLLGSTQIGKLSVCAQAVGMAQAALE 259

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ Y++ R   G  +   P ++  I D+A D+  A       A    E K  + +AA  
Sbjct: 260 AAVKYSKERVQRGKPIAYFPTIQSLIGDMATDVMVAHQAVLATAFKASEGKELASDAAR- 318

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                 T+ +  +    V ++AM+ +G   Y  E  I R +R++    I  G      L 
Sbjct: 319 ------TRLFTSEAVHRVASKAMQVMGAYSYTTEFPIERIFRDAKLTEIYEGVNEIQRLI 372

Query: 454 VLNLLEK 460
               L +
Sbjct: 373 AAADLLR 379


>gi|302550412|ref|ZP_07302754.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
 gi|302468030|gb|EFL31123.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736]
          Length = 394

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 81/442 (18%), Positives = 140/442 (31%), Gaps = 57/442 (12%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           P F  ++    D LL             E E LG      T +  A  A+   P +  + 
Sbjct: 6   PPFDPVDPLGLDDLL-------------EPEDLGIR---DTVRAWA--ADRVLPYVAEWY 47

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
             GE        P    L +     G+                A +   A L L A    
Sbjct: 48  EKGEL-------PGIRELAKEL--GGIGALGMSLDGYGCAGASAVQYGLACLELEAADSG 98

Query: 149 G--HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +      +   +    +    + W P+             M    V    GLTE  
Sbjct: 99  IRSLVSVQGSLAMYAIHRFGSEEQKQQWLPR-------------MAAGDVIGCFGLTEPD 145

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D A++ +  ++            W  +  ++   ++ AQ E  +  F+VP       
Sbjct: 146 HGSDPASMRTHAKRDGTDWVLNGRKMWITNGSVAGVAVVWAQTEDGIRGFVVPT-----D 200

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMS 324
             G     +K+K   R++ T EL   +        L   TG    +  L          +
Sbjct: 201 SAGFSAPEIKHKWSLRASVTSELVLDDVRLPAAAVLPEGTGLRGPLSCLSHARYGIVWGA 260

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R S   A+ YA+ R   G  +    + +  +AD+A+++     L+  L    D  +
Sbjct: 261 MGAARSSFEAAVDYAKSREQFGRPIGGFQLTQAKLADMAVELHKGILLAHHLGRRMDAGR 320

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R E+ ++        K    + A  +   A   +G +G   E  + RH     +     
Sbjct: 321 LRPEQVSFG-------KLNNVREAIEICRTARTILGANGISLEYPVMRHATNLESVLTYE 373

Query: 445 GSGNAMVLDVLNLLEKGTNLFE 466
           G+   M   VL     G + F 
Sbjct: 374 GTVE-MHQLVLGKALTGLDAFR 394


>gi|289641203|ref|ZP_06473370.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508965|gb|EFD29897.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 614

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/488 (17%), Positives = 172/488 (35%), Gaps = 64/488 (13%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              H+ L  L        A+  A  A+ N P   A          V    ++     + +
Sbjct: 36  DTAHEALAELDRLATGPIAESFA-DADRNPPVFDASS------GSVTLPESFKKSYAQLM 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
                          +    +    A+ L L A       MS    +A +  L T  +  
Sbjct: 89  EGQWWRLFVPPHLGGMGAPPSVAWAASELVLGANPAVFMYMSGPTFAAILDRLGTAEQ-- 146

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           KD A     R++  T             + LTE   G+D+ A  ++     DG + + G 
Sbjct: 147 KDLARLAIERQWGAT-------------MVLTEPDAGSDVGAGRTRAVPQPDGSWHIEGV 193

Query: 232 KWFLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLLED------GSPNGLCYQR 274
           K F+++   D       + LA+          +  FLVP+ L D         NG+    
Sbjct: 194 KRFITNGDWDVPENIFHLTLARPVGHGPGTKGLSMFLVPKFLVDPNTGEPRERNGVHVSN 253

Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G + +AT EL +       G+L+GD++     + ++     +     +++ +   
Sbjct: 254 VEKKMGLKVSATCELRYGEKQPAVGWLVGDVHDGIAQMFEVIEYARMMVGTKAIATLSTG 313

Query: 332 LAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
              A+ +AR R                  +I  P ++R +           AL    A  
Sbjct: 314 YLNALEFARTRVQGADLTRLLDKTAPRVTVIHHPDVRRMLMVQKAYAEGMRALVLYTATI 373

Query: 380 FDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            D                    ++ PI K    + +  ++A +++ +GGSGY+++  I +
Sbjct: 374 QDRVALAQAAGTRDELAERLNDLLLPIVKGVGSERSYELLATSLQVLGGSGYLQDYPIEQ 433

Query: 433 HYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRD 489
           + R++  +++  G+ +    D     ++   +     L   ++    G +G   +   R+
Sbjct: 434 YIRDAKIDTLYEGTTSIQGQDFFFRKIVRDRSTALGALLGEIQAFAKGDAGDGSLRRERE 493

Query: 490 SISLCKED 497
            + +  ++
Sbjct: 494 VLGVALDN 501


>gi|2492632|sp|Q60759|GCDH_MOUSE RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|1439521|gb|AAB04679.1| glutaryl-CoA dehydrogenase precursor [Mus musculus]
          Length = 438

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 118/311 (37%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++              K  +    GLTE   G+D   +
Sbjct: 145 SSLVMHPIYTYGSEEQRQKYLPRL-------------AKGELLGCFGLTEPNHGSDPGGM 191

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D FI+ A+ E       +P  + +    G   
Sbjct: 192 ETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDN----CIPGFILEKGMRGSSA 247

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 248 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 304

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 305 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 364

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 365 E-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 417

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 418 DIHALILGRAI 428


>gi|317126619|ref|YP_004100731.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590707|gb|ADU50004.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 392

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 117/360 (32%), Gaps = 33/360 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     G+     +          A+ +    L          +      +   + 
Sbjct: 54  RELAQELGELGVLGMHLEGYGCAGTSATAYGLACMELEAGDSGIRSLVSVQGSLAMFAIW 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ + E                  GLTE   G++   + ++ ++  D
Sbjct: 114 KHGSEEQKQEWLPRLAAGE-------------AIGCFGLTEPDFGSNPGGMRTRARRDGD 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ AQ + R+  F+VP         G     +K K+  R+
Sbjct: 161 DWILTGNKMWITNGSVADVAVVWAQTDDRIRGFVVPT-----DTPGFSAPEIKKKLSLRA 215

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL            L  + G       L  L+ A   +        R SL  AI Y
Sbjct: 216 SVTSELVLDEVRLPASAILPEAAGLS---GPLSCLNEARYGIIFGSLGAARDSLETAITY 272

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R +    L    + +  +AD+AL++     L+  L    DE   +S           
Sbjct: 273 ALERQIFDRPLAAFQLTQAKLADMALELGKGMLLALHLGRLKDEGLLQS-------NQVS 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K    + + A+  E    +G +G   E  + RH     +     G+     L +   L
Sbjct: 326 LGKLNNVRESIAIARECRTILGAAGITLEYPVMRHANNLESVLTYEGTSEVHQLVIGQAL 385


>gi|254451813|ref|ZP_05065250.1| isobutyryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198266219|gb|EDY90489.1| isobutyryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 515

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 130/366 (35%), Gaps = 35/366 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +      G+        +  +   +A     +       +  G L + +  +A ++    
Sbjct: 170 IDELAEMGVFGLTIPEEYGGLGLSKASMCVVSEELSRGYIGVGSLGTRTEIAAELIIAGG 229

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T    + W P + S E  PT                TE   G+D+ A+ ++  K  D   
Sbjct: 230 TEEQKQKWLPALASAEKLPTAV-------------FTEPNTGSDLGALRARAVKDGDDYR 276

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQRLK 276
                 W   +  +    +LA+          +   L + +P          G+    ++
Sbjct: 277 VTGNKTWITHASRTHVMTLLARTNPDSSDYKGLSMFLAEKTPGDDAHPFPTEGMTGGEIE 336

Query: 277 NKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             +G R     EL F N        L G+       + +      + +A  ++     +L
Sbjct: 337 -VLGYRGMKEHELAFDNFHVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVACSAL 395

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ YA+ R   G  LI+ P +   +A +A++I  A  L++  A   DE +    EA  
Sbjct: 396 DVAMQYAQDRKQFGKSLIEFPRVANKLAMMAVEIMIARQLTYFSAFEKDEGRRCDVEAGM 455

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+++         ++A A    A++  GG+G+  E  ++R   ++   +I  G+      
Sbjct: 456 AKLL-------GARVAWAAADNALQIHGGNGFALEYKVSRILCDARILNIFEGAAEIQAQ 508

Query: 453 DVLNLL 458
            +   +
Sbjct: 509 VIARRI 514


>gi|15898849|ref|NP_343454.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2]
 gi|284173359|ref|ZP_06387328.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus 98/2]
 gi|13815346|gb|AAK42244.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2]
 gi|261603260|gb|ACX92863.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus
           98/2]
          Length = 371

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 157/380 (41%), Gaps = 49/380 (12%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            + DK +++P    L+R+    G    L   + +     ++ + A    +  L   AQ E
Sbjct: 24  NKIDKEDYYP--RDLVRKLGELGFLIPLTSGLSNYDMMIILEEIAKVSGSLALIADAQGE 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +  M+ L    R  K++               P+ K  +     LTE  G
Sbjct: 82  L---------AGEMIRLYANERQKKEFME-------------PLSKGEIIGSFALTEPSG 119

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLE 263
           G+DI ++ +  +K  +G + + GHK +++    +D FI +A+       +  F+VPR   
Sbjct: 120 GSDIGSMKTLAEKR-NGSWIIKGHKMWITQGLYADVFITVAKTGSSRRDLSVFIVPR--- 175

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
               N +  ++++  +GNR   T E+ F N      +++G++N     V  +  +  L  
Sbjct: 176 ---SNCVETRKIE-VMGNRGTGTAEVIFHNCEVSNDYVVGEVNNGWNMVNSVLEIGRLAI 231

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + +++     +L EA  +A+ R   G  + D   ++   AD    + A  +++  +++ F
Sbjct: 232 SGIAIGLAEAALEEAFKWAKSRFAFGNSIYDFQGIRWYFADAIAKLNAVKSMAKDVSSKF 291

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE            +   + K     +A  VI  +++  GG GY +  +I R YR++   
Sbjct: 292 DENSKDK------GVYVSMLKLLSANIANEVIDISLQVFGGMGYAKGTNIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   +E+
Sbjct: 346 RIGEGTDEVQRHIIAKYIEQ 365


>gi|289705171|ref|ZP_06501574.1| putative butyryl-CoA dehydrogenase [Micrococcus luteus SK58]
 gi|289558115|gb|EFD51403.1| putative butyryl-CoA dehydrogenase [Micrococcus luteus SK58]
          Length = 395

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 144/412 (34%), Gaps = 51/412 (12%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            VLS T +E A       P                 H   + ++ +    GL    +   
Sbjct: 16  QVLSDTVREFADEV--VAPVSAELDA---------KHEFPYEIVAQMGEMGLFGLPFPEE 64

Query: 124 FEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +  +         A   L  + Q  A  L +     A  +    T    + W P + +  
Sbjct: 65  YGGMGGDYFALALALEQLGRVNQSVAITLEAGVSLGAMPLLKFGTEEQKQRWLPDLVAGT 124

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +               G GLTE   G+D     +    + DG + ++G K F+++  +D 
Sbjct: 125 H-------------LAGFGLTEPGAGSDAGGTQTTA-ALEDGQWRINGAKEFITNSGTDI 170

Query: 243 FIMLAQV------EGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             ++         EGR G        +  +L      G    +  +K+G  S+ T  L F
Sbjct: 171 TSLVTVTAVTGTVEGRTGHDGRPAKEISTILVPAGTEGFSVAKAYDKVGWNSSDTHALHF 230

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSG 346
           ++        L        +   L  LD   ++++ +     +  + E++ YA++R   G
Sbjct: 231 TDARVPEENLLGARGRGFANF--LEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFG 288

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   IA +     AA    +  A      K    EAA A+++A        +
Sbjct: 289 QKIGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIAG-------E 341

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A     +A +  GG G++ E  +ARHYR+S    +  G+    ++ +   L
Sbjct: 342 AAMDNARDATQVFGGYGFMNETLVARHYRDSKILEVGEGTTEVQLMLIAREL 393


>gi|302125401|gb|ADK93986.1| glutaryl-CoA dehydrogenase-like protein [Sphingopyxis
           macrogoltabida]
          Length = 394

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 120/360 (33%), Gaps = 31/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L R     GL        +        A+ + A  +  +           S      + 
Sbjct: 54  ELFRMMGEAGLLGVTLPEEYGGAAASYVAYGLVAREIERVDSGYRSMASVQSSLVIYPIL 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P + S               +    GLTE   G+D   + +  +K  D
Sbjct: 114 AYGSEEQKRKYLPGLASG-------------QLIGCFGLTEPDAGSDPGGMRTVAKKDGD 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP +D F++ A+ E   G   +   + D    GL   ++K KI  R+
Sbjct: 161 GYVLSGAKTWISNSPFADVFVVWAKSEAHGGK--IRGFILDKGMKGLEAPKIKGKISLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-- 341
           + T  +              +  G          L+ A   +S   +  AE   +A R  
Sbjct: 219 STTGMIMMDEVRVGADA---LMPGGEGLGGPFGCLNRARYGISWGAMGAAEFCFHASRQY 275

Query: 342 ---RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    + ++ +AD+ +DIA     S R+    DE +       +A  M  
Sbjct: 276 GLDRKQFGRPLAATQLHQKKLADMMVDIAMGLQSSLRVGRLMDEGR-------FAPEMVS 328

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K      A  +  +A +  GG+G  EE  + RH       +   G+ +   L +   +
Sbjct: 329 MVKRNNVGKALDIARQARDMHGGNGISEEYQVIRHMVNLETVNTYEGAHDVHALILGRAI 388


>gi|169598071|ref|XP_001792459.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15]
 gi|111070363|gb|EAT91483.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15]
          Length = 666

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 123/554 (22%), Positives = 213/554 (38%), Gaps = 88/554 (15%)

Query: 32  IGMNAYSSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
            G NA S D +   ++  +       V K+   +    L+ T    A  A  N P L  +
Sbjct: 42  DGQNA-SDDPITTRILKLYLPPNTTEVEKDAHKIARLSLNPTVLVHATDAETNHPVLRPF 100

Query: 88  GPGGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              G+    D +     W  L       G+    +++S     R+  H      L+    
Sbjct: 101 TTFGQENNNDPLWTTTGWQKLKEIGYEAGVVAVAYEQSHTSFNRR-IHAFVLNHLWSPTG 159

Query: 146 LEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              G  MS +  +A+++      P   +    K+F+ E      +     +   G  +TE
Sbjct: 160 TMTGCPMSMTDGAATLLKRHLNDPEGDQPGRNKVFT-EAYERLTSRDPNFAWTSGQWMTE 218

Query: 205 KRGGTDIAAITSQGQKISD--------------------GIYCLSGHKWFLSSPMSDAFI 244
           + GG+D++   +   ++S                     G + + G KWF S+  S+  +
Sbjct: 219 RAGGSDVSGTETFAHRVSKEYLEQEKKAGRGSDAVGMPLGPWKIDGFKWFSSATDSEMAV 278

Query: 245 MLAQV-EGRVGCFLVPRLLEDGSP--------------NGLCYQRLKNKIGNRSNATVEL 289
           +LA+  +G +  F +P     G                NG+  QRLKNK+G +S  T EL
Sbjct: 279 LLARTSKGGLSAFYIPMRRRAGEGASATNEQAPPPTELNGIRIQRLKNKLGTKSLPTAEL 338

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           E +   G+L+G        +  +  +  L +   SV+     LA    Y++ R V GG+L
Sbjct: 339 ELNGARGWLIGTEGQGVKDISAILNITRLSTGAGSVASWSRGLAICRAYSKVRKVRGGLL 398

Query: 350 IDQPVMKRAIADIALDIAAATALSF--------------------RLANSFDEAKSRSEE 389
            D P   + +AD  +   AA   +F                    R AN     K+    
Sbjct: 399 QDNPAHLKWMADETVKYWAAAHFAFLGVALQGSLEQDWDKMVANTRAANLIPRDKAHV-- 456

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS------IARHYRESPANSIL 443
           AA  R++ P+ K      +   + + MEC+GG GY E         IA+ YR++  N I 
Sbjct: 457 AALLRLILPVMKAQVTVASVHGLRQCMECLGGIGYCENNEDGGLLNIAKIYRDNLVNPIW 516

Query: 444 LGSGNAMVLDVLNLLEK----GTNLFEQLFSTLEQDL-----------GSSGKKVITILR 488
            G+ + M  DV+ +L        N+   +F+   +D+             S ++ + +L 
Sbjct: 517 EGTVSVMAEDVVRVLLDKRLGDGNVLTSIFAPWVRDVLQHCGFIFATQAESIRRRLQVLI 576

Query: 489 DSISLCKEDKGLAR 502
           D +   ++D+ L R
Sbjct: 577 DVVQGARKDELLYR 590


>gi|169237018|ref|YP_001690218.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167728084|emb|CAP14872.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 387

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 117/364 (32%), Gaps = 24/364 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G +    D    P V + A+ +    L                     +  
Sbjct: 46  ELIPEMGEMGFYAPNLDGYGLPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + + E                  GLTE   G++ +A+ +  +   D 
Sbjct: 106 FGSEAQKERWLPALGAGE-------------AVGCFGLTEPEHGSNPSAMETTAEPDGDE 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D  ++ A+  G  G   V   L +   +G+    +  K+  R++
Sbjct: 153 YVLNGSKTWITNSPIADVAVVWARDHGEDGTP-VRGFLVETDRDGVTTNEIDEKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
            T E+   N        L    G    +  L       A  +V   R     A  YA  R
Sbjct: 212 ITGEISLRNVRVPAESRLPGVEGMKGPLSCLTQARYGIAWGAVGAARNCFETAREYATDR 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
                 +    + +  +A++A  I  +  L+ RLA   +    R +  + A+        
Sbjct: 272 EQFDQPIGGFQMQQDKLAEMATQITTSQLLAHRLAGLKERGDLRPQHVSMAKR------- 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              +MA      A E +GG+G   +    RH           G+ +   L +   L  G 
Sbjct: 325 NNVRMARDQARVAREMLGGNGITTDYPPMRHMANMETVYTYEGTHDIHTLILGEDLT-GM 383

Query: 463 NLFE 466
             ++
Sbjct: 384 QAYQ 387


>gi|255262021|ref|ZP_05341363.1| acyl-CoA dehydrogenase [Thalassiobium sp. R2A62]
 gi|255104356|gb|EET47030.1| acyl-CoA dehydrogenase [Thalassiobium sp. R2A62]
          Length = 387

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 104/287 (36%), Gaps = 16/287 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +       P  +      L +TE   G+D+  +     +   G + L+G K F+S     
Sbjct: 105 DQIERYLMPAVRGERMDALAMTEPGAGSDVRGMKCSAVRDG-GDWVLNGTKHFISGAEHA 163

Query: 242 AFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
            F+++    G     R     +   L D    G   +     + +R    + LEF +   
Sbjct: 164 DFVIVFVATGEDQTPRGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYQNMILEFDDCRL 223

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG+++     +        +  A M V   R     A+ YA +R   G  +    
Sbjct: 224 PDAQVLGEVDGGFEVMNTWLYATRITVATMCVGRARRVFDYALDYAAQREQFGQPIGKFQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   IAD+  +I AA  L+   A+  D+    + E           K +  +M   V  
Sbjct: 284 GVGFQIADMITEIDAADLLTLAAADRLDQKLPSNRE-------IASAKLYASEMLARVTD 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A++  GG G +++  + R +R++    I  G+       +   L +
Sbjct: 337 AAIQIHGGMGLMDDYPLERFWRDARVERIWDGTSEIQRHIITRDLLR 383


>gi|198423810|ref|XP_002130227.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase [Ciona
           intestinalis]
          Length = 435

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 125/363 (34%), Gaps = 31/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+  +             A+ + A     +       +   S      + 
Sbjct: 89  RDIMYEMGELGILGATIKGYGCAGASYVAYGLLARECERVDSGYRSGMSVQSSLVMHPIN 148

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-S 222
              T    + + PK+              +  +    GLTE   G+D  ++ ++ +    
Sbjct: 149 AYGTEEQKEKYLPKL-------------AQGKLIGSFGLTEPNHGSDPGSMETKAKYDSG 195

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G Y L+G K W  +SP++D F++ A+      G   V   + +    GL   +++ K  
Sbjct: 196 TGAYILNGAKSWITNSPIADVFVVWAKCAKEGNGKETVRGFILERGMKGLSTPKIEGKFS 255

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            R++ T ++   +             G          L+SA   +S   +  AE   +A 
Sbjct: 256 LRASITGQIVMEDVAVPAENMFPDVEGLKGPFG---CLNSARYGISWGALGAAEFCLHAA 312

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R      L    ++++  AD   +I+       R+    DE K+       A  
Sbjct: 313 RQYTLDRVQFKRPLAQNQLIQKKFADALTEISIGLQSCIRVGRLIDEGKA-------APE 365

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  ++    + +GG+G  +E  I RH     + +   G+ +   L + 
Sbjct: 366 MISLVKRNSCGKALEIVRNMRDTLGGNGISDEYHIIRHVMNLESVNTYEGTHDIHALILG 425

Query: 456 NLL 458
             +
Sbjct: 426 KAI 428


>gi|163744850|ref|ZP_02152210.1| isobutyryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
 gi|161381668|gb|EDQ06077.1| isobutyryl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45]
          Length = 560

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 132/368 (35%), Gaps = 35/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F  +   +A     +       +  G L + S  +A ++  
Sbjct: 212 EVIEELAEMGVFGLTIPEEFGGLGLTKASMCVVSEELSRGYIGVGSLGTRSEIAAELILC 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P+I S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 272 GGTDAQKEKWLPRIASAETLPTAV-------------FTEPNTGSDLGSLRTRAVKDGDD 318

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L + +P          G+    
Sbjct: 319 YKVTGNKTWITHAARTHVMTLLARTDSETTDHRGLSMFLAEKTPGDDANPFPTPGMTGGE 378

Query: 275 LKNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           ++  +G R     EL F      G   L G+       + +      + +A  ++   + 
Sbjct: 379 IE-VLGYRGMKEYELAFDGFEVKGENLLGGEEGRGFKQLMETFESARIQTAARAIGVAQS 437

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  ++ YA+ R   G  LID P +   +A +A+++  A  L++  A   D  +    EA
Sbjct: 438 ALDISMQYAQDRKQFGKSLIDFPRVSGKLAMMAVELMIARQLTYYSAFEKDAGRRCDVEA 497

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+    
Sbjct: 498 GMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEIQ 550

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 551 AQVIARRL 558


>gi|126323368|ref|XP_001377762.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 418

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 108/283 (38%), Gaps = 15/283 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSS 237
           S E        + K  +    GLTE   G+D  ++ ++ +  +    Y L+G K W  +S
Sbjct: 137 SEEQRQRFLPRLAKGEILGCFGLTEPNHGSDPGSMETKARYNAASKTYTLNGSKTWITNS 196

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P++D F++ A  E       V   L +    GL   +++ K   RS+ T  +   +    
Sbjct: 197 PVADLFVVWAVCEDGK----VRGFLLEKGMRGLSAPKIEGKFALRSSITGMILMDDVEVP 252

Query: 298 LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
               L  ++G       L       A  ++      +  A  Y   R   G  L    ++
Sbjct: 253 EQNLLPHASGLSGPFGCLTTARFGIAWGALGAAEFCMHTARQYTLDRKQFGVPLAKNQLI 312

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD+  +I        +L    D+ K+  E       M  + K   C  A  +  +A
Sbjct: 313 QKKLADMLTEITLGLHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQA 365

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + +GG+G  +E  + RH     A +   G+ +   L +   +
Sbjct: 366 RDMLGGNGISDEYHVIRHVMNLEAVNTYEGTHDIHALILGRAI 408


>gi|94310790|ref|YP_584000.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354642|gb|ABF08731.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 619

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 87/517 (16%), Positives = 181/517 (35%), Gaps = 82/517 (15%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           + V   P     L+     GL  +  D  +  +      +  A   +  A +        
Sbjct: 69  ETVTIIPEVKTALKAFCDAGLMAAGQDYEYGGMQLPVTLEKAAFAYFKAANVGTSSYPFL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +++++    TP                 T   P  +      + L+E + G+ ++ I
Sbjct: 129 TIGNSNLLLTHGTPAQ-------------IDTFVRPELEGRFFGTMCLSEPQAGSSLSDI 175

Query: 215 TSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGC 255
           T++     +      Y L G+K ++S+   +       ++LA++ G           +  
Sbjct: 176 TTRADYEGESPLGQQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLIPGVKGISL 235

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGFLL 299
           F+VP+ L +     G  N +    L +K+G R      L F               G+L+
Sbjct: 236 FIVPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYRPNGKAGAIGYLV 295

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------- 348
           G+ +     +  M     +   + +V+        A+ YAR R   G             
Sbjct: 296 GEPHKGLACMFHMMNEARIGVGLGAVALGYTGYLHALDYARNRPQ-GRPVGPQGKDPASP 354

Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---------YARIM 396
              L++   ++R +      +    AL+   A   D+  +                  I+
Sbjct: 355 QVKLVEHADVRRMLLAQKSYVEGGLALNLYCARLVDDEHAAKAAGEAERQCELSLLLDIL 414

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L 
Sbjct: 415 TPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLG 474

Query: 457 ---LLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL----TE 506
              +++ G     L +++  T ++   +  K +    R   +       + R L      
Sbjct: 475 RKVVMQDGAAFQLLGKRVQDTCQRAQATGDKTLGEQARALGAATARLAEVTRTLWAAGDS 534

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHC 543
            + LA+++  L   G   +A ++LE   +     ++ 
Sbjct: 535 NVTLANASVYLEAFGHVVMAWIWLEQVLVAQAALSNA 571


>gi|15607356|ref|NP_214729.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis H37Rv]
 gi|148659979|ref|YP_001281502.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|167968787|ref|ZP_02551064.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|215406208|ref|ZP_03418389.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis 02_1987]
 gi|215448496|ref|ZP_03435248.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T85]
 gi|218755952|ref|ZP_03534748.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|254549154|ref|ZP_05139601.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289552467|ref|ZP_06441677.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 605]
 gi|289760319|ref|ZP_06519697.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T85]
 gi|289764331|ref|ZP_06523709.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|294994689|ref|ZP_06800380.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis 210]
 gi|297632695|ref|ZP_06950475.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 4207]
 gi|297729669|ref|ZP_06958787.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN R506]
 gi|313656995|ref|ZP_07813875.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN V2475]
 gi|1871588|emb|CAB07010.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE3 [Mycobacterium tuberculosis
           H37Rv]
 gi|148504131|gb|ABQ71940.1| acyl-CoA dehydrogenase FadE3 [Mycobacterium tuberculosis H37Ra]
 gi|289437099|gb|EFD19592.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 605]
 gi|289711837|gb|EFD75853.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis GM 1503]
 gi|289715883|gb|EFD79895.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T85]
 gi|326905970|gb|EGE52903.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis W-148]
          Length = 357

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 124/344 (36%), Gaps = 34/344 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 37  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 93

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 94  AKLLTLFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 140

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 141 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 199

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 200 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 260 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           EA  A       K +  ++A  +   A+   GG GY  E  + R
Sbjct: 320 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVER 356


>gi|290463053|gb|ADD24574.1| Probable acyl coa dehydrogenase 6 [Lepeophtheirus salmonis]
          Length = 408

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 135/378 (35%), Gaps = 23/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  + W+    +PA H + +     GL        +         K   A    M 
Sbjct: 45  KEINPNVDAWESEGRYPA-HEVFKILGSAGLLGVNKPVEYGGSGLD--FKYAVALNEEMG 101

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           ++  G +      S ++   M+TP +      +  S +       P  K      LG++E
Sbjct: 102 KIACGGVP----MSIAVQTDMSTPAL-----SRFGSHQLKKQFLEPSIKGEFVSCLGVSE 152

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLE 263
              G+D+A+I +  ++    +       W  +   +D   +LA  E           +  
Sbjct: 153 PGAGSDVASIRTTARRSGGDLIINGSKMWITNGCQADWMCLLANTEDSKNPHKNKSLICL 212

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
                G+   +  +K+G   + T  +   +      +++G+     G          + +
Sbjct: 213 PMDTPGITIAKKIDKLGMLCSDTAMIYLEDVKIPESYIIGEPGNGFGYQMLQFQEERIAA 272

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A + +  +   + E I Y + R    G ++D   ++  +A++A +     +  +R  ++F
Sbjct: 273 ATLCLGPIEKMIQETIEYTKSRKAFNGSILDNQYVQFKLAELATETELLRSGVYRTTDAF 332

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              +          ++A + K  C ++        ++  GG G+    +I+  +R+    
Sbjct: 333 LNGQD-------VTMLASMLKLKCGRLIRETSDTCLQFWGGMGFTSSVNISSAFRDFRLI 385

Query: 441 SILLGSGNAMVLDVLNLL 458
           SI  G+   M+  +  L+
Sbjct: 386 SIGGGADEVMLTIISKLM 403


>gi|315503036|ref|YP_004081923.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315409655|gb|ADU07772.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 383

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 122/360 (33%), Gaps = 27/360 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R+    G         ++        ++          +      + S+  A+
Sbjct: 38  PHSPELYRKMAELGWLGLSLPEEYDG-GGAGMTELCLFLEETSRAMAPIGGFTTSIIVAA 96

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
                 TP   K     +                 V   + ++E   G+D+A ++ + ++
Sbjct: 97  TYQRFGTPEQKKLILSGV--------------ARGVVEAVAMSEPEAGSDVANLSCRAER 142

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKI 279
             DG        W  ++ +++  +++A+  GR G    +   L      GL    + + +
Sbjct: 143 RGDGWVVNGQKTWCSNAHLAEHILLVARTSGRAGDHQGLTMFLVPAGAPGLTVSGI-DTM 201

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R     +L F++        +         +     +  L  A + +   R +  + +
Sbjct: 202 GGREVN--DLYFTDCVLPADAVVGRVDHGWRQLMAGLNMERLILASVVLGIARRAFDDVV 259

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R      +    V++  +AD+A +I  A  L +  A   D+A             
Sbjct: 260 AYVKDRRQFRRPIGSFQVIRHRLADLATEIECARLLVYDTAAKVDKAPDTV-----LPRE 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + + K    + A  V  +AM+ +GG GY  E  + R  R +  +++  G+       +  
Sbjct: 315 SSMAKLKATETARRVALDAMQMMGGYGYTTEFDMERLVRSAIVSTVYGGASEIQREIIAK 374


>gi|326435102|gb|EGD80672.1| acyl-CoA dehydrogenase domain-containing protein [Salpingoeca sp.
           ATCC 50818]
          Length = 832

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 105/301 (34%), Gaps = 25/301 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD+ E  P     LR+    GL        +      +                 
Sbjct: 77  PYMQDWDEKEEFPV--ETLRQLAGLGLGAIYASSEYGGSGMSRMDASLIFEALSHGCTST 134

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A M+    T      + P + S E                   LTE   G
Sbjct: 135 TAYLSIHNMCAWMIDKFGTEEQRSTFVPALASMEQMG-------------SYCLTEPGSG 181

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D AA+ +  +K  D  Y L+G K F+S    +D ++++A+  G  G   +   + +   
Sbjct: 182 SDAAALRTTAKKDGDD-YILNGSKAFISGGGDTDVYLIMART-GEPGPKGISCFIVNRD- 238

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
           +GL +   + K+G  S  T  +   +        L    G      I +       ++ A
Sbjct: 239 DGLTFGAKERKLGWNSQPTRMVIMEDVRVPASSVLGGEEGVGRGFNIAMDGINGGRINIA 298

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             SV G + SL + + Y   R   G  + D   ++  +AD A +++A+  +    A   D
Sbjct: 299 SCSVGGAQASLLQTVEYMNERKQFGSKISDFQALQFRLADYAAELSASRQVVRLAARELD 358

Query: 382 E 382
            
Sbjct: 359 A 359


>gi|55669741|pdb|1SIR|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa
           Dehydrogenase
 gi|185177598|pdb|2R0N|A Chain A, The Effect Of A Glu370asp Mutation In Glutaryl-Coa
           Dehydrogenase On Proton Transfer To The Dienolate
           Intermediate
          Length = 394

 Score =  210 bits (535), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 78  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 125 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 185 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 238 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 298 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 351 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 384


>gi|313221167|emb|CBY31992.1| unnamed protein product [Oikopleura dioica]
 gi|313229914|emb|CBY07619.1| unnamed protein product [Oikopleura dioica]
          Length = 407

 Score =  210 bits (535), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 120/374 (32%), Gaps = 36/374 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E+W+K            ++   GL           +       +                
Sbjct: 57  EKWEKQGMCD--REAWLKAGEMGLLGVDAPEEVGGIGGDFLSAMIVNEEQAYHNCSGLGF 114

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +    T    ++  P   S E               + +G+TE   G+D+
Sbjct: 115 SVHSDICLPYIYKYGTAEQ-RELIPSFVSGE-------------KILCIGMTEPGTGSDL 160

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVG--CFLVPRLLEDGSPN 268
             + +      D  Y ++G K F+S+ +   + +LA   +         +   L D S N
Sbjct: 161 QGLKTTAVADGDD-YVINGSKVFISNGIMADYCILAVVTDPSASNKAGAMSLFLVDTSFN 219

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLG------DLNVSTGPVEDMKILIYLDSAI 322
                +   K+G ++N T EL F +              LN   G + +      L   +
Sbjct: 220 ---RGKNLKKVGVKANDTAELFFDDLRVPKSAILGGPDCLNQGFGFLMNELARERLMIGV 276

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              +G+         Y + R   G  LI    ++  +A+I  + A   +         D+
Sbjct: 277 QCAAGLEGMFELTRGYVKERKAFGKELIKLQTIQHRLAEIKTEAAFCRSFV-------DK 329

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A             A + KY   + A   I++ ++  GG GY+ E  IAR Y +S    +
Sbjct: 330 AMELQVNEELDYTTASMAKYMVSEKAHVNISKMLQLFGGWGYMWEYPIARAYADSRVAMV 389

Query: 443 LLGSGNAMVLDVLN 456
             G+   M   +  
Sbjct: 390 YGGANEIMKELIAR 403


>gi|121609371|ref|YP_997178.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554011|gb|ABM58160.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 385

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 136/380 (35%), Gaps = 31/380 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA--ARLYLMAQ 145
            P  + W+  E  PA H L ++    G         +  +    ++ + A  A  Y+ AQ
Sbjct: 22  DPFVDEWEAAEIFPA-HELFKKMGRLGFLGITKPTEYGGLGLDFSYAVAAGEAMGYVRAQ 80

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             +      +  +   +A   +  + +++              AP     V + +G++E+
Sbjct: 81  GVSMAAGVQTDMATPALAAFGSDELKREFL-------------APAIAGDVVVCIGVSEQ 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPR 260
             G+D+A++ +  ++            W  +   +D   +L               +VP 
Sbjct: 128 GAGSDVASLQTHARRDGGDYLISGAKMWITNGTQADWICLLCNTSDGPMHKNKSLIIVPL 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLD 319
             +     G+  Q++  K G   + T ++ F      +   +     G +  MK      
Sbjct: 188 KDKGQRAKGVAVQKI-RKFGMWCSDTAQIFFDEVRVPVRHRIGAEGMGFIYQMKQFQEER 246

Query: 320 SAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               +     + L  E   Y R+R   G  L+D   ++  +A++  ++ A   L +    
Sbjct: 247 LGAAARRLAAIQLIDETADYLRQRIAFGKPLLDNQFIQFKLAELKTELEALRGLVYMATQ 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++       E       +A + K    +++  +    M+  GG GY  +  ++R YR+  
Sbjct: 307 TYVSGGDVVE-------LASMAKLKAGRLSREIAQWCMQFQGGMGYTWDNPVSRAYRDFR 359

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             SI  G+   M+  +   +
Sbjct: 360 LCSIGGGADEVMMQVIAKQM 379


>gi|70994276|ref|XP_751977.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66849611|gb|EAL89939.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
          Length = 541

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 79/390 (20%), Positives = 137/390 (35%), Gaps = 22/390 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL  + +         +          + M   
Sbjct: 157 PYVTEWDEAKKVPDSVYKQMGERGYLAGLLGTKYPIQHTRNRVQSVAPENWDLFHEMLLT 216

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            +++       P + K     +  R         +      I L +TE
Sbjct: 217 DELSRAGSGGLVWNLIGGFGIGCPPLVKFGKKALVDR-----ILPGILAGDKRICLAITE 271

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 272 PDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGGPGMNGISVLLI 331

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 332 EREAGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGI 390

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   EA+ YA +R   G  LID PV++  +A +A  I A       L N  
Sbjct: 391 VIQCVRFARVCYEEAMKYAHKRRTFGKKLIDHPVIRMKLAHMARQIEATYNW---LENII 447

Query: 381 DEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +S  E  A  ++   I   K            EA +  GG  Y        + R YR
Sbjct: 448 YQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYSRGGQGGKVERLYR 507

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +  A +I  GS   M+   +    +   LF
Sbjct: 508 DVRAYAIPGGSEEIMLDLSVRQSLRVHQLF 537


>gi|109123598|ref|XP_001110430.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 3
           [Macaca mulatta]
          Length = 438

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 128/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + N+  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENMLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|21224222|ref|NP_630001.1| acyl-coa dehydrogenase RedW [Streptomyces coelicolor A3(2)]
 gi|256784696|ref|ZP_05523127.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
 gi|289768582|ref|ZP_06527960.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
 gi|2815365|emb|CAA16488.1| acyl-coa dehydrogenase RedW [Streptomyces coelicolor A3(2)]
 gi|289698781|gb|EFD66210.1| acyl-coa dehydrogenase RedW [Streptomyces lividans TK24]
          Length = 391

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 120/385 (31%), Gaps = 31/385 (8%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
                 G   D  +F   W      +   GL  +     +                    
Sbjct: 26  RELDSSGRFDDAEDFRRRWL----LAGKQGLTGTTVPGEYGGSGLDAVSAAATMEALGYG 81

Query: 145 QLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             + G   S +     +   +    T      W P + S E                   
Sbjct: 82  CADTGFAFSVAAHLFAAVMPIVEFGTGEQRAAWLPALCSGE-------------RIAAHA 128

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D   + ++ + + DG        +  ++P++D F++ A  + R G F +   
Sbjct: 129 ITEPEAGSDALHLRTRARPVDDGHVLSGSKCFITNAPVADVFVVQAATDPRGGFFGLTTF 188

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           L + S  GL   R  +K+G R + T ++ F + +      L             +  +  
Sbjct: 189 LVEASTPGLTVGRPYDKVGLRGSPTADVHFDDCYVPAGAVLGAEGSGASIFSSSMKWERT 248

Query: 322 ---IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                 +  MR  L   + + R R   G  +     +   I D+      A  L +R A 
Sbjct: 249 CLFAAYLGAMRRVLESTVDHVRDREQFGSPIGGFQAVSHRIVDMLGRYEGARLLLYRAAR 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S  +  +     A A+I          + A  +  +A++  GG G + +       R++ 
Sbjct: 309 SLSDGTADEVGPALAKIA-------VSEAAVQLGLDAVQLRGGLGIM-DGEAETLLRDAL 360

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN 463
              I  G+      +V   L  G  
Sbjct: 361 PARIFSGTNEIQKNNVARALGLGRR 385


>gi|294085548|ref|YP_003552308.1| acyl-CoA dehydrogenase-like protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665123|gb|ADE40224.1| acyl-CoA dehydrogenase-like protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 395

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 129/368 (35%), Gaps = 34/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL        +  +     A+ + A  +  +       +   S      + 
Sbjct: 54  ELFGLMGQTGLLGVTVPEQYGGIGASYVAYGLVAREVERIDSGYRSMMSVQSSLVMFPIY 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + PK+ S ++                 GLTE   G+D AA+ ++ +K SD
Sbjct: 114 EYGSEEQRLKYLPKLASGDF-------------IGCFGLTEPDAGSDPAAMKTRAEKTSD 160

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ +   G   +   + +    GL   ++  K+  R+
Sbjct: 161 GYRITGSKMWISNAPIADVFVVWAKSDAHDGK--IKGFILEKGMAGLTAPKIGGKLSLRA 218

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+             +     VE +K     L+ A   +S   +  AE   +  R 
Sbjct: 219 SVTGEIVMDAVEV----GEDAILPNVEGLKGPFGCLNRARYGISWGVMGAAEDCWHRARQ 274

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R      L    + ++ +AD+  +IA     S RL    DE +       +A  + 
Sbjct: 275 YGLDRKQFDRPLAQTQLFQKKLADMQTEIALGLQGSLRLGRLMDEGR-------FAPEII 327

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K   C  A  +   + +  GG+G      I RH +     +   G+ +   L +L  
Sbjct: 328 SIMKRNNCGKALDIARASRDMHGGNGIQIGYHIMRHAQNLETVNTYEGTHDVHAL-ILGR 386

Query: 458 LEKGTNLF 465
            + G   F
Sbjct: 387 AQTGLQAF 394


>gi|55669740|pdb|1SIQ|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa
           Dehydrogenase
          Length = 392

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 76  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 122

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 123 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 182

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 183 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 235

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 236 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 295

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 296 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 348

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 349 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 382


>gi|260431894|ref|ZP_05785865.1| acyl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415722|gb|EEX08981.1| acyl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 386

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 16/294 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 101 CQGDQVERYLMPAVRGEKMDALAMTEPGAGSDVRGMKCSAVRDG-GDWVVNGTKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+          +     +   L D    G   +     + +R    + L+F +
Sbjct: 160 EHADFIIVFIATGEDHTPKGPKKRITAFLVDRGTPGFTIRDGYKSVSHRGYKNMVLDFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     +        +  A M V   R +   A+ YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFEVMNTWLYATRITVAAMCVGRARRAFDYALDYAATREQFGQKIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A+  D+          A       K +  +M   
Sbjct: 280 KFQGVSFQIADMITEIDAADLLTLAAADRLDQGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           V   A++  GG G +++  + R +R++    I  G+       +   L +    
Sbjct: 333 VTDAAIQVHGGMGLMDDYPLERFWRDARVERIWDGTSEIQRHIISRDLLRALGA 386


>gi|315501524|ref|YP_004080411.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315408143|gb|ADU06260.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 386

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 117/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                A+ +    L          +      +   + 
Sbjct: 48  RELAREFGKLGLLGMHLTGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E                  GLTE   G+D A++ ++ ++  D
Sbjct: 108 RYGSEEQKQRWLPAMAAGE-------------AIGCFGLTEPDHGSDPASMATRARRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++P++D  ++ A+ +  V  F VP         G+  + +++K+  R+
Sbjct: 155 DWILNGSKLWITNAPIADVGVIWARTDDGVRGFAVPM-----DTPGVTAREIRHKMSLRA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          ++   R  L  A+ YA  
Sbjct: 210 SLTGEIALDDVRLPADARLPEAIGLKAPLGCLTEARHGIVWGALGAARDCLETALEYATT 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + +  +AD+A++      L+  L    D    R ++         + K
Sbjct: 270 RTQFGRPLAGFQLTQAKLADMAVEWNKGMLLALHLGRLADAGTLRPDQ-------VSVGK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  + RH     +     G+     L +   L
Sbjct: 323 LNNVREALAIARQCRTILGANGVSGEYPVMRHANNLESVLTYEGTSEIHQLVIGQRL 379


>gi|319793839|ref|YP_004155479.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315596302|gb|ADU37368.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 618

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 96/571 (16%), Positives = 189/571 (33%), Gaps = 94/571 (16%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P           +D 
Sbjct: 6   TLDFLLYDWLDAESLNKSERFADHSRETFDAVLDTCERIAREKYAPFNRTVDTQEPHFDG 65

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV    A H   +  +  G+  +  D     +         A   + MA +  G  M  
Sbjct: 66  EKVILPKATHDAHKAFVESGMMSAAQDYDIGGMQLPYTLSAAANSFFAMASVSIGSNM-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++ +  T    + +A   FS  +  T             + L+E + G+ ++ +
Sbjct: 125 TSGNANLLMVHGTETQKEVFAKNEFSGRWAGT-------------MCLSEPQAGSSLSDV 171

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEGR--------- 252
            ++                Y L+G+K ++SS   +       I+LA++            
Sbjct: 172 ATRAVPDGADYQDDPLGPRYRLTGNKMWISSGDHELTENIVHIVLAKIPDENGKLVPGTR 231

Query: 253 -VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
            +  F+VP+ + +      G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKRMVNTKGELTGERNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVDGKAGAV 291

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347
           G+L+G        +  M     +     +          ++ YA+ R   G         
Sbjct: 292 GYLVGAPGKGLHCMFHMMNEARIGVGTAATMLGMAGYYASLEYAKSRPQ-GRLVKKPEAG 350

Query: 348 --------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-- 391
                          +I+   ++R +         A AL    A   D  K+ + +AA  
Sbjct: 351 AGSQVVKDSASPQVRIIEHADVRRMLLAQKAYCEGALALELYCARLVDTQKTGAAQAADD 410

Query: 392 ---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+  
Sbjct: 411 ARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHG 470

Query: 449 AMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGK-KVITILRDSISLCKEDKGLARFL 504
               D+L    L+EKG  L + L   + + +G + K   +     ++    +  G A   
Sbjct: 471 IQAADLLGRKVLMEKGRGL-QLLAGRITETIGRTAKVPALAAHAKALGDALQRIGSATEA 529

Query: 505 TEKI-----ALASSAAALYRAGMNDIADVFL 530
                    ALA++   +   G   +A ++L
Sbjct: 530 AWSTGDPADALANAVPYMQAFGHTVLAWLWL 560


>gi|302865027|ref|YP_003833664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302567886|gb|ADL44088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 386

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 117/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                A+ +    L          +      +   + 
Sbjct: 48  RELAREFGKLGLLGMHLTGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E                  GLTE   G+D A++ ++ ++  D
Sbjct: 108 RYGSEEQKQRWLPAMAAGE-------------AIGCFGLTEPDHGSDPASMATRARRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++P++D  ++ A+ +  V  F VP         G+  + +++K+  R+
Sbjct: 155 DWILNGSKLWITNAPIADVGVIWARTDDGVRGFAVPM-----DTPGVTAREIRHKMSLRA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          ++   R  L  A+ YA  
Sbjct: 210 SLTGEIALDDVRLPADARLPEAIGLKAPLGCLTEARHGIVWGALGAARDCLETALEYATT 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + +  +AD+A++      L+  L    D    R ++         + K
Sbjct: 270 RTQFGRPLAGFQLTQAKLADMAVEWNKGMLLALHLGRLADAGTLRPDQ-------VSVGK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  + RH     +     G+     L +   L
Sbjct: 323 LNNVREALAIARQCRTILGANGVSGEYPVMRHANNLESVLTYEGTSEIHQLVIGQRL 379


>gi|84683946|ref|ZP_01011848.1| acyl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667699|gb|EAQ14167.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654]
          Length = 577

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 129/368 (35%), Gaps = 35/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+       +   +   +A  +  +       +  G L + S  +A ++  
Sbjct: 229 EVIEELAEMGVFGLTIPENLGGLGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILA 288

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PKI S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 289 GGTDEQKSTWLPKIASGEVLPTAV-------------FTEPNTGSDLGSLRTRAVKDGDT 335

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 336 YTVTGNKTWITHAARASVMTLLARTDPSTDNYKGLSMFLAEKEPGTDENPFPTEGMTGGE 395

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F          L      G  + M+      + +A  ++   + 
Sbjct: 396 IE-VLGYRGMKEFELGFDGFKVPAANLLGGAEGQGFKQLMQTFESARIQTAARAIGVAQS 454

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +    EA
Sbjct: 455 ALEVGMQYAIDRKQFGKSLINFPRVAGKLAMMAVEIMVARQLTYFSAWEKDNDRRCDLEA 514

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+    
Sbjct: 515 GMAKLL-------GARVAWACADNALQIHGGNGFALEYQISRILCDARILNIFEGAAEIQ 567

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 568 AQVIARRL 575


>gi|157820807|ref|NP_001102366.1| glutaryl-CoA dehydrogenase, mitochondrial [Rattus norvegicus]
 gi|149037832|gb|EDL92192.1| glutaryl-Coenzyme A dehydrogenase (predicted) [Rattus norvegicus]
          Length = 447

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 119/311 (38%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++              K  +    GLTE   G+D  ++
Sbjct: 154 SSLVMHPIYTYGSEEQRQKYLPRL-------------AKGELLGCFGLTEPNHGSDPGSM 200

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D F++ A+ E       +   L +    GL  
Sbjct: 201 ETRARHNPSNKSYTLSGTKTWITNSPVADLFVVWARCEDN----CIRGFLLEKGMRGLSA 256

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 257 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 313

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 314 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 373

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 374 E-------MVSLLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 426

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 427 DIHALILGRAI 437


>gi|15839595|ref|NP_334632.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|148821408|ref|YP_001286162.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis F11]
 gi|253797137|ref|YP_003030138.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 1435]
 gi|254366664|ref|ZP_04982708.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|289747982|ref|ZP_06507360.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 02_1987]
 gi|308231495|ref|ZP_07412642.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu001]
 gi|308369335|ref|ZP_07417385.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu002]
 gi|308370346|ref|ZP_07421158.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu003]
 gi|308371620|ref|ZP_07425527.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu004]
 gi|308372837|ref|ZP_07430062.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu005]
 gi|308373917|ref|ZP_07434104.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu006]
 gi|308375101|ref|ZP_07442680.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu007]
 gi|308376338|ref|ZP_07438467.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu008]
 gi|308378580|ref|ZP_07483068.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu009]
 gi|308379725|ref|ZP_07487299.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu010]
 gi|308380927|ref|ZP_07491518.2| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu011]
 gi|13879711|gb|AAK44446.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|134152176|gb|EBA44221.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148719935|gb|ABR04560.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis F11]
 gi|253318640|gb|ACT23243.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 1435]
 gi|289688510|gb|EFD55998.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 02_1987]
 gi|308217138|gb|EFO76537.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu001]
 gi|308327976|gb|EFP16827.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu002]
 gi|308332356|gb|EFP21207.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu003]
 gi|308336108|gb|EFP24959.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu004]
 gi|308339739|gb|EFP28590.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu005]
 gi|308343744|gb|EFP32595.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu006]
 gi|308347465|gb|EFP36316.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu007]
 gi|308351515|gb|EFP40366.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu008]
 gi|308352091|gb|EFP40942.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu009]
 gi|308356041|gb|EFP44892.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu010]
 gi|308359997|gb|EFP48848.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis SUMu011]
 gi|323717204|gb|EGB26413.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis CDC1551A]
 gi|328456924|gb|AEB02347.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis KZN 4207]
          Length = 373

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 124/344 (36%), Gaps = 34/344 (9%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           +  AW   ++   H G++    D  +          ++  +      +     M      
Sbjct: 53  YPEAWIEQMK---HIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVV 109

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++ L  T    + + P + S E   T             + LTE  GG+D+  +++  
Sbjct: 110 AKLLTLFGTEEQRRTYLPPMASGELRAT-------------MALTEPGGGSDLQNMSTTA 156

Query: 219 QKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCY 272
                    G+       W  ++  S  F +L + +         +  +L +  P GL  
Sbjct: 157 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVLVEPGP-GLTV 215

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILI--YLDSAIMSVSGM 328
            R   K+G +   + EL F N    +   L  + G      MK L    +  A  ++   
Sbjct: 216 SRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVA 275

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L +++ YA++R   G  +     +   +AD+A  + AA  L+   A  +D  +    
Sbjct: 276 TAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDM 335

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           EA  A       K +  ++A  +   A+   GG GY  E  + R
Sbjct: 336 EAGMA-------KLFASEVAMEIALNAVRIHGGYGYSTEYDVER 372


>gi|319791032|ref|YP_004152672.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315593495|gb|ADU34561.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 392

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 85/382 (22%), Positives = 146/382 (38%), Gaps = 30/382 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E WD     P   AL  R+   GL    +  +F       ++ ++      +A+   
Sbjct: 26  PNVEAWDDAGEFP--RALYTRAAELGLLGLGYAEAFGGT--PASYSLKLPAWIALARHGK 81

Query: 149 GHLMSPSVTSASM----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  S+ S ++    V L  +  V  +  P +   E                 L +TE
Sbjct: 82  SGGVLASLFSHNIGLPPVVLHASDAVRHEVVPAVLRGE-------------KIAALAITE 128

Query: 205 KRGGTDIAAITSQGQKI--SDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPR 260
             GG+D+AA+ +  ++    DG  Y L+G K F++S M   +I +A   G   G   +  
Sbjct: 129 PGGGSDVAALRTTARRESAGDGDHYVLNGEKTFITSGMRAHWITVAVRTGEGRGAGGISM 188

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIY 317
           LL  G   GL  +RL  K+G   + T  L F N      +LLGD       +        
Sbjct: 189 LLVPGDALGLSRKRL-TKMGWWCSDTATLHFDNVRVPARYLLGDEGAGFRMIMGNFNGER 247

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  ++   +  L EA+ ++R R   G  LI+   ++  + D+ + IA+  A    ++
Sbjct: 248 IGLAAGALGFAQACLDEALAWSRERKTFGAALIEHQAVRHKLVDMQMRIASTEAWLEAVS 307

Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              D  ++     A        + K    +       +A++ +GG G++      R YRE
Sbjct: 308 AEGDAHEAAGRFNAPEWVAQVCMLKNHATQTMQFCADQAVQILGGMGFMRGTVSERIYRE 367

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+   M       L
Sbjct: 368 VKVMMIGGGAEEIMKELAARQL 389


>gi|302866628|ref|YP_003835265.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302569487|gb|ADL45689.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 383

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 126/360 (35%), Gaps = 27/360 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R+    G         F+        ++          +      + S+  A+
Sbjct: 38  PHSPELYRKMAELGWLGLSLPEEFDG-GGAGMTELCLFLEETSRAMAPIGGFTTSIIVAA 96

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
                 TP   K     +                 V   + ++E   G+D+A ++ + ++
Sbjct: 97  TYQRFGTPEQKKLILSGV--------------ARGVVEAVAMSEPEAGSDVANLSCRAER 142

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKI 279
             DG        W  ++ +++  +++A+  GR G    +   L      GL    + + +
Sbjct: 143 RGDGWVVNGQKTWCSNAHLAEHILLVARTSGRAGDHQGLTMFLVPAGAPGLTVSGI-DTM 201

Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R     +L F++       ++G ++     +     +  L  A + +   R +  + +
Sbjct: 202 GGREVN--DLYFTDCLLPADAVVGRVDHGWRQLMAGLNMERLILASVVLGIARRAFDDVV 259

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R      +    V++  +AD+A +I  A  L +  A   D+A             
Sbjct: 260 AYVKDRRQFRRPIGSFQVIRHRLADLATEIECARLLVYDTAAKVDKAPDTV-----LPRE 314

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + + K    + A  V  +AM+ +GG GY  E  + R  R +  +++  G+       +  
Sbjct: 315 SSMAKLKATETARRVALDAMQMMGGYGYTTEFDMERLVRSAIVSTVYGGASEIQREIIAK 374


>gi|126663014|ref|ZP_01734012.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
 gi|126624672|gb|EAZ95362.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38]
          Length = 392

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 140/379 (36%), Gaps = 45/379 (11%)

Query: 91  GERWDKVEFHPAWHALLRRS-----IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
              W K E  P      +++     I  GL        + PV    A   + +   +M +
Sbjct: 29  ARAWVKKEVSPIIEEYAQKAEFPHQIVKGLGEIGGFGPYIPVEYGGAGLDQISYGLIMQE 88

Query: 146 LEAGHLMSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           +E G     S +S         +           + PK+ + E+                
Sbjct: 89  IERGDSGVRSTSSVQSSLVMYPIWKYGNEEQRMKYLPKLATGEF-------------IGC 135

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258
            GLTE   G++ A + +  + + D         W  ++P +D  ++ A+  EGR+   +V
Sbjct: 136 FGLTEPDYGSNPAGMVTNYKDMGDHYLLNGAKMWISNAPFADIAVVWAKNEEGRIHGLIV 195

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R +E     G       NK   R++AT EL F N         N+          L  L
Sbjct: 196 ERGME-----GFSTPETHNKWSLRASATGELIFDNVKVP---KENLLPNKSGLGAPLGCL 247

Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           DSA   ++   +  A      A+ Y++ R      +    + ++ +A++  +I  A  L+
Sbjct: 248 DSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKKLAEMITEITKAQLLT 307

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +RL    +E K+ + + + A+            MA  +  +A + +GG G   E SI RH
Sbjct: 308 WRLGVLRNEGKATTAQISMAKR-------NNVDMALTIARDARQMLGGMGITGEYSIMRH 360

Query: 434 YRESPANSILLGSGNAMVL 452
                +     G+ +  +L
Sbjct: 361 MMNLESVVTYEGTHDIHLL 379


>gi|16944400|emb|CAD11366.1| conserved hypothetical protein [Neurospora crassa]
          Length = 697

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 115/616 (18%), Positives = 207/616 (33%), Gaps = 131/616 (21%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           +++ F   QP   I  N +  D  L  +   +        V  E+  LG+ VLS    + 
Sbjct: 6   ANTGFIQQQP---IIKNQFHEDVSLQRIAKLYLPPSLLEKVTPEISRLGDAVLSQQIFDW 62

Query: 74  ARMANYNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RK 130
              A  NTP L        G    ++     W  L      +G+    +D +  P     
Sbjct: 63  ITDAERNTPYLRGSGRDAFGRPKQELIVTEGWRKLQEFGFANGVVAINYDSTSSPSPNGP 122

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWAPKIFS--REYDP 185
            +  I+  R +L     A  +   ++   +   L    TTP +  + +    S  +    
Sbjct: 123 YSRLIQFIRCHLWEASCANTMCPAAMQDGAARLLQRHLTTPPLAANLSETERSVFQNAYD 182

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----------------KISD---GIY 226
              +     +   G  +TE+ GG+D++   +                   K  +   G +
Sbjct: 183 HLTSRDPAYTWTSGQWMTERTGGSDVSQTETVATYSPFPAGRQQPVPLACKEENMPLGPW 242

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP------------------- 267
            +SG KWF S+  S   I+LA+    +G   V                            
Sbjct: 243 SISGFKWFSSATDSQMTILLAKTRPGMG---VSAFFAPMRRWNPELVSPTCTGPGATGGT 299

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
             NG+   RLK+K G  S  T ELE  +  G+L+G        +  +  +    + + S+
Sbjct: 300 ELNGVTISRLKSKFGTVSLPTAELELKDMRGWLIGKEGEGIKEISTILNITRAHTTVSSM 359

Query: 326 SGMRVSLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +   +  A  YA  R  +G        L   P+  R +AD+  +      L+F     
Sbjct: 360 GYLGRGIGVAKAYALVREAAGVGKGRRLPLYKHPLHMRTLADLTAEYHGLMLLTFYTLYI 419

Query: 380 --FDEAKSRSEEAA--------------------------------------YARIMAPI 399
              DE  S    ++                                        R ++ +
Sbjct: 420 LGLDEHLSSPSMSSPSMSSPSVSSPSLSSPISPPPPLHPLTPPTTDPNLVPPLLRTLSSL 479

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGY-----IEERSIARHYRESPANSILLGSGNAMVLDV 454
            K + C     +    ME +GG GY      E  +++R +R++   +I  G+ + +  D 
Sbjct: 480 HKSFVCHTTIPLSFSCMESLGGVGYLLNSDSEHLNLSRLFRDACVGAIWEGTTDVLASDT 539

Query: 455 LNLLEK-------------------GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495
           L  L++                   GT+  E+     ++  G   +K    L+  I   K
Sbjct: 540 LRALKQPAVEALGWLVETGLAASLEGTDQKEKEEGKEQKAEGEWIRKCWDGLKRRIEKGK 599

Query: 496 EDKGL--ARFLTEKIA 509
           +++ +  AR LT ++A
Sbjct: 600 KEELVSGARGLTHRLA 615


>gi|220912175|ref|YP_002487484.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219859053|gb|ACL39395.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 391

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 74/410 (18%), Positives = 142/410 (34%), Gaps = 43/410 (10%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           LS   Q+L+         + A  P   + D+    P  + ++++    GL    +   + 
Sbjct: 6   LSEEYQDLSDTVRDFADNVVA--PVSAKHDEEHSFP--YEVVKQMADMGLFGLPFPEEYG 61

Query: 126 PVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +         A   L  + Q  A  L +     A  V    T    + W P++ S    
Sbjct: 62  GMGGDYFALALALEQLGRVDQSVAITLEAGVSLGAMPVYRFGTEEQKQQWLPQLASG--- 118

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDGI-YCLSGHKWFLSSPMSD 241
                         G GLTE   G+D     +   +    D   + ++G+K F+++  +D
Sbjct: 119 ----------QALAGFGLTEPEAGSDAGGTKTHAHRESVGDKTEWVINGNKEFITNSGTD 168

Query: 242 A---FIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                 + A               +  +L      G   ++  NK+G  ++ T  L   +
Sbjct: 169 ITRLVTVTAVTGQHDRGDGTVRKEISTILVPTDTPGFKAEKAYNKVGWNASDTHPLTLKD 228

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGI 348
                   L        +   L  LD   ++++ +     +  +  ++ YAR R   G  
Sbjct: 229 VRVPEANLLGEEGRGYANF--LSILDEGRIAIAALATGAAQGCVDLSVRYARERKAFGHE 286

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   IA +      A    +  A      K    +AA A+++A        + A
Sbjct: 287 IGKYQAISFKIARMEARAHTARLAYYDAAARMLAGKPFKTQAAIAKMVAG-------EAA 339

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                +A +  GG G+I E ++ARHYR+S    +  G+    ++ +   L
Sbjct: 340 MDNARDATQVFGGYGFINEFTVARHYRDSKILEVGEGTTEVQLMLIAREL 389


>gi|254454378|ref|ZP_05067815.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198268784|gb|EDY93054.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 390

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 104/294 (35%), Gaps = 16/294 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E     + P  +      L +TE   G+D+  +     +   G + L+G K F+S  
Sbjct: 105 CEGEQIERYRDPAVRGERMDALAMTEPGAGSDVRGMKCSAVRDG-GDWVLNGTKHFISGA 163

Query: 239 MSDAF-IMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F I+          R     +   L D    G   +     + +R    + L+F +
Sbjct: 164 DHADFLIVFVATGEDQTPRGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMILDFDD 223

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A MSV   R     A++YA  R   G  + 
Sbjct: 224 CRLPDAQVLGEVDGGFAVMNEWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQKIG 283

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A+  D+          A       K +  +M   
Sbjct: 284 KFQGISFQLADMITEIDAADLLTLAAADRLDKGLP-------ANREIASAKLYASEMLGR 336

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           V   A++  GG G +++  + R +R++    I  G+       +   + +    
Sbjct: 337 VTDAAIQVHGGMGLMDDFPLERFWRDARVERIWDGTSEIQRHIISREMLRALGA 390


>gi|228909059|ref|ZP_04072888.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200]
 gi|228850567|gb|EEM95392.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200]
          Length = 382

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 137/353 (38%), Gaps = 31/353 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMV 162
           + +++     G+  +   + +  +        R   +   A      L++  V+     +
Sbjct: 34  YDVIQELSSHGVLGATIPKEYGGLSLDSLDYGRLTEIIGKACNSVRELLTVHVSLVGESI 93

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P++ +              ++     LTE   G+D  A+ +  +++ 
Sbjct: 94  KRWGTEEQKRKWLPEMATG-------------NLLFSFALTEPEVGSDAKAVGTSYKQVD 140

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D        KW   + ++D F++ A  EG+     V   + + S  G+   ++   + + 
Sbjct: 141 DYFILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKLLASN 195

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           S+   E+   +        L    G    +     LD    S++   V++A+      + 
Sbjct: 196 SSHIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALEAMVA 254

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y+RRR      + +   ++  +A+ +++I AA +L           K R +    A I  
Sbjct: 255 YSRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDAVIET 308

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            I KY+  KMA  +  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 309 TIAKYFASKMAMKIATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361


>gi|304391269|ref|ZP_07373213.1| glutaryl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303296625|gb|EFL90981.1| glutaryl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 417

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 130/369 (35%), Gaps = 31/369 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL  +     F        ++ + A  +  +       +   S      +
Sbjct: 74  REIMSEMGDLGLLGATLPEEFGGSGASYVSYGLVAREVERVDSGYRSAMSVQSSLVMHPI 133

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T      + P++ S               +    GLTE   G+D   + ++ + ++
Sbjct: 134 FAYGTDEQRSKFLPELASG-------------RMVGCFGLTEPDHGSDAGGMLTRAKPVA 180

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP++D  ++ A+++   G  +   +LE G   GL   +++ K   R
Sbjct: 181 GGYSLSGAKNWITNSPIADVMVVWAKLDDGNGDKIRGFILERG-MKGLETPKIEGKFSLR 239

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-- 340
           ++ T  ++    F      L   +G          L+ A   +S   +  AE   +A   
Sbjct: 240 ASVTGMIQMDEVFVPEANLLPHVSGLAGPFG---CLNKARYGISWGAMGAAEFCWHAART 296

Query: 341 ---RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R   G  L    ++++ +AD+  +I+     S RL    D+  +  E       + 
Sbjct: 297 YTLERKQFGRPLAQTQLIQKKLADMQTEISLGLQGSLRLGRLIDDHAAPVE-------LI 349

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A  V   A +  GG+G  +E  + RH     A +   G+ +   L +L  
Sbjct: 350 SLMKRNNCGKALDVARNARDMHGGNGVSDEYGVIRHVMNLEAVNTYEGTHDVHAL-ILGR 408

Query: 458 LEKGTNLFE 466
            + G   F 
Sbjct: 409 AQTGLQAFM 417


>gi|307328909|ref|ZP_07608078.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885419|gb|EFN16436.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 395

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 126/407 (30%), Gaps = 43/407 (10%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            +  T ++ A  A+   P +  +   GE        P    L R     G          
Sbjct: 27  AVRDTMRQWA--ADRVLPHVADWFERGEV-------PGIRELARELGSLGALGMSLTGYG 77

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                   + +    L          +      S   +    +    + W P++ S E  
Sbjct: 78  CAGASPIQYGLACLELEAADSGIRSLMSVQGSLSMYAIHRFGSEEQKQQWLPRMASGE-- 135

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                      V    GLTE   G+D A + +  ++            W  +  ++   +
Sbjct: 136 -----------VIGCFGLTEPDHGSDPAGMRTYAKRDGSDWVLTGRKMWITNGSVAGVAV 184

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A  +  +  F+VP         G     +K+K   R++ T EL            L  
Sbjct: 185 VWAHTDEGIRGFVVPT-----DAPGFSAPDIKHKWSLRASVTSELVLDEVRLPADAVLPE 239

Query: 305 STGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            TG       L  L  A   +        R +   A+ YAR R   G  +    + +  +
Sbjct: 240 VTGLR---GPLSCLGHARYGIIWGSMGAARSAFESALDYAREREQFGRPIGGFQLTQAKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+AL++     L+  L    +  + R E+ ++        K    + A  +   +   +
Sbjct: 297 ADMALELHKGILLAHHLGRRMEAGRLRPEQVSFG-------KLNNVREAIEICRTSRTIL 349

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 350 GANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGIDAFR 395


>gi|110678692|ref|YP_681699.1| isobutyryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109454808|gb|ABG31013.1| isobutyryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 561

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 141/388 (36%), Gaps = 44/388 (11%)

Query: 94  WDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +KVE F   WH         ++      G+        +      +A     +      
Sbjct: 193 VEKVEPFAHEWHLKDELIPMEVIDELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRG 252

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            +  G L + S  +A ++    T    + W P++ S E  PT                TE
Sbjct: 253 YIGVGSLGTRSEIAAELIIAGGTQEQKEKWLPRLASAETLPTAV-------------FTE 299

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D+ ++ ++  K  +         W   +  ++   +LA+ +        +   L 
Sbjct: 300 PNTGSDLGSLRTRAVKDGENYTITGNKTWITHATRTNVMTLLARTDPDTTDYRGLSMFLA 359

Query: 264 DGSPN---------GLCYQRLKNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVE 310
           + +P          G+    ++  +G R     EL F N    G   L G+       + 
Sbjct: 360 EKTPGDDENPFPTDGMTGGEIE-VLGYRGMKEYELAFDNFEVKGENLLGGEEGKGFKQLM 418

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +      + +A  +V   + +L  A+ YA+ R   G  LI+ P +   +A +A++I  A 
Sbjct: 419 ETFESARIQTAARAVGVAQSALDIAMQYAQERKQFGKSLIEFPRVSGKLAMMAVEIMIAR 478

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L++  A   DE +    EA  A+++         ++A A     ++  GG+G+  E  I
Sbjct: 479 QLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKI 531

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           +R   ++   +I  G+       +   +
Sbjct: 532 SRVLCDARILNIFEGAAEIQAQVIARRI 559


>gi|260425328|ref|ZP_05779308.1| isobutyryl-CoA dehydrogenase [Citreicella sp. SE45]
 gi|260423268|gb|EEX16518.1| isobutyryl-CoA dehydrogenase [Citreicella sp. SE45]
          Length = 562

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 138/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        +      +A     +       +  G L + S  +A ++  
Sbjct: 213 EVIEELAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELILA 272

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P + S E  PT                TE   G+D+ ++ ++  +  DG
Sbjct: 273 GGTDEQKQKWLPALASGEKLPTAV-------------FTEPNTGSDLGSLRTRAVRGEDG 319

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 320 DYTITGNKTWITHAARAHVMTLLARTDSATSDYKGLSMFLAEKTPGTDEDPFPTPGMTGG 379

Query: 274 RLKNKIGNRSNATVELEFSN--TFGF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F      G   L G+       + +      + +A  ++   +
Sbjct: 380 EIE-VLGYRGMKEYELGFDGFKVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQ 438

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + YA  R   G  LI  P +   +A +A+++  A  L++  A   DE      E
Sbjct: 439 AALDVGMRYAEERKQFGKSLIAFPRVSGKLAMMAVELMIARQLTYFSAREKDEGIRCDLE 498

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A    A++  GG+G+  E +++R   ++   +I  G+   
Sbjct: 499 AGMAKLL-------GARVAWANADNALQIHGGNGFALEYTVSRILCDARILNIFEGAAEI 551

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 552 QAQVIARRL 560


>gi|3023862|sp|P81140|GCDH_PIG RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|260168|gb|AAB24225.1| glutaryl-CoA dehydrogenase, GCDH [swine, liver, Peptide Partial,
           408 aa]
          Length = 408

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 114/311 (36%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S+    + A  +  +  + + P++              K  +    GLTE   G+D  ++
Sbjct: 115 SLVMHPIYAYGSEEQQQQKYLPRL-------------AKGELLGCFGLTEPNHGSDPGSM 161

Query: 215 TSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++      +          W  +SP++D F++ A+ E       +   L +    GL  
Sbjct: 162 ETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDN----CIRGFLLEKGMRGLSA 217

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++AT  +   +       + NV             L++A   +S   +  
Sbjct: 218 PKIEGKFSLRASATGMIIMDDVEVP---EENVLPKASSLAVPFGCLNNARYGISWGVLGA 274

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  Y   R   G  L    +++R +AD+  +I        +L    D+ K   
Sbjct: 275 AEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTEITLGLHACLQLGRLKDQDKVTP 334

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 335 E-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTH 387

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 388 DIHALILGRAI 398


>gi|167045380|gb|ABZ10036.1| putative acyl-CoA dehydrogenase, C-terminal domain protein
           [uncultured marine microorganism HF4000_APKG10F13]
          Length = 388

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 125/338 (36%), Gaps = 30/338 (8%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ +    L          +      S   +    +    K + P + + E         
Sbjct: 78  AYGLVCQELERGDSALRSFVSVQGSLSMYPIHAFGSEDQKKKYLPGMATGE--------- 128

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
               +    GLTE   G+D + + ++     D         W  +  ++D  I+ A+++G
Sbjct: 129 ----LIGCFGLTEPDHGSDPSRMETKAIANGDDYVLNGAKMWITNGTIADLAIVWAKLDG 184

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
           ++  F++     + +  G     +K K   R++ T EL   +     G LL +++   GP
Sbjct: 185 KIRGFII-----EKNDEGFSAPEMKGKHSLRASVTSELVLQDCRIPGGRLLPNVSGLKGP 239

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  +           ++         ++ YA+ R + G  +    ++++ +A +  +I  
Sbjct: 240 LSCL-TQARYGIVWGALGAAMGCYHASVKYAKSRIMFGKPIGSFQLVQQKLAWMLREITK 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L++ L  + D+ ++  E       M  + K     +A ++   A +  G +G + E 
Sbjct: 299 GQLLAYHLGRAKDKDEASPE-------MVSLGKMNNVDVALSIARMARDIHGANGILNEY 351

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            I RH     + S   G+ +   L +L     G   FE
Sbjct: 352 PIMRHMANLESVSTYEGTHDIHNL-ILGKWITGIQAFE 388


>gi|309779196|ref|ZP_07673959.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308922000|gb|EFP67634.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 391

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 119/318 (37%), Gaps = 25/318 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++L  TP   + +  K+   E                   L+E   
Sbjct: 91  ADFAFAMQGLGSGAISLHGTPEQRERYLTKVARGE-------------AIAAFALSEPEA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    ++            W  +  ++D +I+ A+     G   +   + +   
Sbjct: 138 GSDVAAMACAAREDGTDYVLDGEKTWISNGGIADFYIVFARSGEAPGSRGISAFIVEAGT 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G       N I         L F+N        +     G    M+ L       A  +
Sbjct: 198 PGFEIAERINVIAPH--PLARLRFTNCRIPASQRVGAAGEGFKVAMRTLDVFRTSVAAAA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+  A  R +  G+L D  + +  +A +A  I +A  L++R A   D+ +
Sbjct: 256 LGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGR 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A++ A        + A  VI  A++  GG G + E+ + R YRE  +  I  
Sbjct: 316 NVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPVERLYREIRSLRIYE 368

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+     L +   L +  
Sbjct: 369 GATEVQQLIIARELLRAA 386


>gi|77462224|ref|YP_351728.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77386642|gb|ABA77827.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|288225915|gb|ADC44452.1| (2S)-methylsuccinyl-CoA dehydrogenase [Rhodobacter sphaeroides]
          Length = 548

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 126/368 (34%), Gaps = 35/368 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 200 EIVEALAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 259

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S E  PT                TE   G+D+ ++ ++  K  D 
Sbjct: 260 GGTDAQKAAWLPKLASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKDGDE 306

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 307 WVVHGNKTWITHAARTHVMTLLARTDLETTDYRGLSMFLAEKVPGTDADPFPTPGMTGGE 366

Query: 275 LKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           ++  +G R     E+ F          L G        +        + +A  ++   + 
Sbjct: 367 IE-VLGYRGMKEYEIGFDGFRVKAENLLGGVEGQGFKQLMQTFESARIQTAARAIGVAQN 425

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +    EA
Sbjct: 426 ALEVGMQYAEERKQFGKALIEFPRVAGKLAMMAVEIMVARQLTYHSAWEKDHGQRCDLEA 485

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+    
Sbjct: 486 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYQISRILCDARILNIFEGAAEIQ 538

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 539 AQVIARRL 546


>gi|332840602|ref|XP_003314022.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Pan troglodytes]
          Length = 408

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 132/383 (34%), Gaps = 44/383 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSRE----YDPTNKAPMQKTSVAIGLGLT 203
           G +MS + +      L   +    + W     S +    +  +   P           L 
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGPSLLGPTGPIFALG 172

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +       +A  ++                  + P S   +             +   L 
Sbjct: 173 QVGCPCPSSA-ATEA----------------CTFPRSRQRV----SRPEFPREGISAFLV 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
                GL   + ++K+G R ++T  L F +          +   P    KI +  LD   
Sbjct: 212 PMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGR 268

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + +A+     A++YA  R   G  L    V++  +AD+AL + +A  L++R A
Sbjct: 269 IGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAA 328

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++
Sbjct: 329 MLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDA 381

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     L +   L +
Sbjct: 382 RITEIYEGTSEIQRLVIAGHLLR 404


>gi|300021749|ref|YP_003754360.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299523570|gb|ADJ22039.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 559

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 75/455 (16%), Positives = 158/455 (34%), Gaps = 64/455 (14%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER------------- 93
           +  F   +   +   G   +     EL        P+   +G  G               
Sbjct: 131 LRRFEDSIADLVAEGGSEPVKARLGELIAA----QPEAMTFGDTGLDETHAQIQDLMRRF 186

Query: 94  -WDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
             D+V  H   WH         ++ +    G+        F  +   +     A+     
Sbjct: 187 CLDEVYPHAHEWHLKNEYIPLDVIAKLAELGVFGLSLPEEFGGMALGKESMCVASEELSR 246

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             +  G L + +  +  ++    TP   + + PKI S E  PT                T
Sbjct: 247 GYIGVGSLGTRAEIAGELILHNGTPEQKEKYLPKIASGEILPTAV-------------FT 293

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRL 261
           E   G+D+A++ ++  K  D +Y ++G K +++ P+ +D   +L +      G   +   
Sbjct: 294 EPNTGSDLASLKTRAVKDGD-VYKITGQKTWITHPVRADIMTVLTRTNPNEPGYKGLSMF 352

Query: 262 LEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVE 310
           + +             G+    ++  +G R     ++ F N        L      G  +
Sbjct: 353 IAEKPRGSDKDPFPAEGMTGGEIE-VLGYRGMKEYDISFDNFEVPAANLLGAAEGQGFKQ 411

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M       + +A  +V   + ++   + YA  R+  G  +   P ++  +  +A++   
Sbjct: 412 LMNTFEGARIQTAARAVGVAQCAMDLGLKYALERNQFGKAIYAFPRVRNKVVMMAVETMI 471

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++  A   D  +    EA  A+++         ++A A    A++  GG+G+  E 
Sbjct: 472 ARQLTYFSARQKDAGRRCDLEAGMAKLL-------GARVAWANADNALQIHGGNGFALEY 524

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            ++R   ++   +I  G+       +   L +  N
Sbjct: 525 PVSRVLCDARILNIFEGAAEIQAQVIARRLLENAN 559


>gi|145257349|ref|XP_001401697.1| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134058611|emb|CAK38595.1| unnamed protein product [Aspergillus niger]
          Length = 545

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 78/382 (20%), Positives = 135/382 (35%), Gaps = 23/382 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSI-WDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P    WD+ +  P   +  +  R    GL     +   + P   +          + M  
Sbjct: 160 PYVTEWDEAKKVPDHIYKQMGERGYLAGLLGMKKYPVDYTPHRVQSVAPENWDLFHEMLL 219

Query: 146 LEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +    +       +++       P + K     +  R         +      I L +T
Sbjct: 220 TDELSRVGSGGLVWNLIGGFGIGCPPLVKFGKKPLVDR-----ILPGILAGDKRICLAIT 274

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL
Sbjct: 275 EPDAGSDVANLTCEAKLSPDGKHYIVNGEKKWITNGVWSDYFTTAVRTGDAGMNGVSVLL 334

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
            +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        + 
Sbjct: 335 IERDMGGVSTRRM-DCQGVWSSGTTYITFEDVKVPVENLIGKENQGFKVIMTNFNHERIG 393

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A       L N 
Sbjct: 394 IVIQCVRFARVCYEESMKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEATYNW---LENI 450

Query: 380 FDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHY 434
             + +S  E  A  ++   I                EA +  GG  Y        I R Y
Sbjct: 451 IYQCQSMDETEAMLKLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKIERLY 510

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+  A +I  GS   M+   + 
Sbjct: 511 RDVRAYAIPGGSEEIMLDLSMR 532


>gi|12667042|emb|CAC28157.1| putative acyl-CoA dehydrogenase [Thauera aromatica]
          Length = 388

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 121/367 (32%), Gaps = 32/367 (8%)

Query: 98  EFHPAWHALLRRSIHDGLH-----CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           E   A   L+ +    G        + +    E +  +    +R           A    
Sbjct: 37  ELDSACRELVAKLGAAGWLRYCVGGTSYGGEHETIDTRSICLLR--ETLARHSGLADFAF 94

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                 +  + L  +    +++ P++ S                     L+E   G+D+A
Sbjct: 95  GMQGLGSGAITLHGSDAQKREYLPRVASG-------------QALAAFALSEPGSGSDVA 141

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+    +   +         W  +  ++D +++ A+     G   +   + D    GL  
Sbjct: 142 AMACSARLDGEYYVLDGEKSWISNGGIADFYVVFARTGEAPGARGLSAFIVDADTPGLEI 201

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
                 I         L F++        L     G    M+ L       A  ++   R
Sbjct: 202 AERIEVIAPH--PLARLRFTDCRVHKSAMLGTPGLGFKVAMQTLDIFRTSVAAAALGFSR 259

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L EA+  A  R +    L D  + +  +A +A  +  +  L++R A   D+    + E
Sbjct: 260 RALDEALRRATTREMFQQKLADFQITQVKLAQMATSVDISALLTYRAAWRRDQGHKVTRE 319

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A++ A        + A  VI  A++  GG G +    +   YRE  A  I  G+   
Sbjct: 320 AAMAKMTA-------TESAQQVIDSAVQIWGGCGVVSNHPVELLYREIRALRIYEGATEV 372

Query: 450 MVLDVLN 456
             L +  
Sbjct: 373 QQLIIAR 379


>gi|311898820|dbj|BAJ31228.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 405

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 129/395 (32%), Gaps = 41/395 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCS-IWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P    WD+ E  P    +++ +   G++    + + F            A          
Sbjct: 29  PAAAEWDEREETP--WPIIQEAAKLGIYSLDFYAQQFFDPSGVGIPI--AMEELFWGDAG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G  ++ +  +A  V    T      WAP++F    +                  +E   
Sbjct: 85  IGLAITGTTLAAVAVLANGTDEQIGTWAPQMFGTPEEVR----------LAAFCSSEPDA 134

Query: 208 GTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
           G+D++A+ ++       D         W  +  ++   +++A V+  +G       +   
Sbjct: 135 GSDVSALRTRAVYDQAKDEWVLNGTKTWATNGGIAHVHVVVATVDPELGARGQASFIVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----------------VSTGPV 309
              GL   +   K G R++ T E+            L                   +G  
Sbjct: 195 GTPGLSQGQKFKKHGIRASHTAEVVLDGVRVPGHCLLGGKEKLDARLARAREGTRGSGKN 254

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M             +V   R +   A+ YA  R   G  +I+   +   +AD+   I 
Sbjct: 255 AAMATFEASRPAVGAQAVGIARAAYEVALDYAGTRVQFGKPIIENQGVAFQLADMKTRID 314

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L +R +      +  +           ++K +  + A  V   AM+ +GG+G+  E
Sbjct: 315 AARLLVWRASWMAATHQPFTAA------EGSMSKLYAGETAKFVTERAMQILGGNGFTRE 368

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             + R +R+S   ++  G+     L +   +    
Sbjct: 369 YPVERMHRDSAIYTVFEGTSEIQRLVIARAVSGAP 403


>gi|218779262|ref|YP_002430580.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760646|gb|ACL03112.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 124/378 (32%), Gaps = 28/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++W+K    P    + ++   +G  C+  D  +        + + A    +      
Sbjct: 27  PHVDQWEKDGVTP--REIWKKMGAEGFLCTWVDEKYGGPGGDFLYSVIALEELVRTNQYG 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 S      +A        + + P   S E                 + ++E   G
Sbjct: 85  LDAFLHSDIVTPYIASFGNEEQREKYLPGCVSGEC-------------ITAVAMSEPDAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGS 266
           +D+A++T       D    L+G K F+S+ +     ++A ++         V   L D  
Sbjct: 132 SDLASMTMTALDDGDH-VVLNGTKTFISNGLLCDVAVVAAIDPEESNRHHAVSLFLVDEG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIM 323
             G    +   K+G  S  T EL F +        L    +G  + M  L    L  A+ 
Sbjct: 191 TPGFEKGKAMKKMGASSQDTAELFFRDCRIPQSNRLGEKGSGFPKLMVKLQQERLLVALN 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V+     L     Y R     G        ++ A+ ++A +         +L       
Sbjct: 251 AVTRAEFVLEWTTKYCRENKSEGKPRSKFQAVQFALVEMATEARLGRTFLDKLIAGHMAG 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + E   A       KYW   MA       ++ +G    +E   +AR +R+     I 
Sbjct: 311 EDVNAETCMA-------KYWATDMAKRTADRCLDLVGLDATVESCPLARMFRDIRVFPIF 363

Query: 444 LGSGNAMVLDVLNLLEKG 461
            G+   M + V   L  G
Sbjct: 364 AGTNEVMKIVVSRSLGLG 381


>gi|284034692|ref|YP_003384623.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283813985|gb|ADB35824.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 619

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 84/524 (16%), Positives = 185/524 (35%), Gaps = 82/524 (15%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            A+   P    Y P   +  +V    ++    +  +                    + + 
Sbjct: 59  DADRFPPV---YDP---QTQEVRMPESFKKSYQAYMDAEWFKLELPPELGGQPTPPSLRW 112

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            AA + L A   A H+ +     A ++    T R       K+ +R         M +  
Sbjct: 113 AAAEMVLGA-NPAVHIYAAGPNFAHVLWRNGTER------DKVIARH--------MIERG 157

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE 250
               + LTE   G+D+ A  ++     DG + + G K F++S   D       ++LA+ +
Sbjct: 158 WGATMVLTEPDAGSDVGAGRTKATLQDDGSWHIEGVKRFITSGEHDMTENIVHLVLARPQ 217

Query: 251 G----------RVGCFLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           G           +  F+VP+   D       G  NG     ++ K+G + + T E+ F  
Sbjct: 218 GIEGVGGPGTKGLSLFIVPKYDFDLETGELTGERNGAYVTNVEKKMGIKVSTTCEITFGE 277

Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--- 347
                G+LLG+++     +  +     +     +++ +      A+ YA++R        
Sbjct: 278 NAPAKGYLLGEVHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKQRVQGADLTN 337

Query: 348 --------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYA 393
                    +   P ++R++        A  AL    A   D A+         +EA   
Sbjct: 338 AAKTAPRVTITHHPDVRRSLMTQKSYSEALRALVLFTATYQDRAEQARYAGEHDDEAERV 397

Query: 394 RI-MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
              + P+ K +  + +  ++  E+++  GGSG++++  I ++ R++  +++  G+     
Sbjct: 398 NDLLLPLVKGYGSEKSWTLLGTESLQTFGGSGFLQDYPIEQYVRDAKIDTLYEGTTAIQ- 456

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
                    G +LF   F  + +D G +   +   ++        + G  R   E+  L 
Sbjct: 457 ---------GQDLF---FRKIIKDQGKALGHLAEQIQ---GFAASEAGNGRLKQER-GLL 500

Query: 512 SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555
           +      +  +  +    + +           +     N + ++
Sbjct: 501 AQGLEDTQKLLGVMGQALMASNPQAENGDPRNVYKVGLNTSRLL 544


>gi|126728354|ref|ZP_01744170.1| isobutyryl-CoA dehydrogenase [Sagittula stellata E-37]
 gi|126711319|gb|EBA10369.1| isobutyryl-CoA dehydrogenase [Sagittula stellata E-37]
          Length = 561

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 146/398 (36%), Gaps = 47/398 (11%)

Query: 85  HAYGPGGERWDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       DKVE F   WH         ++      G+               +A   
Sbjct: 185 EQFRRYA--VDKVEPFAHEWHLKDELIPMEVIEELSEMGVFGLTIPEEHGGFGLSKASMC 242

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T      W PK+ S E  PT         
Sbjct: 243 VVSEELSRGYIGVGSLGTRSEIAAELIIAGGTEEQKAKWLPKLASGEVLPTAV------- 295

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV- 253
                  TE   G+D+ ++ ++  K  +G Y ++G+K +++ +  +    +LA+ +    
Sbjct: 296 ------FTEPNTGSDLGSLRTRAVKDENGDYRVTGNKTWITHAARTHIMTLLARTDPSTD 349

Query: 254 GCFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSN--TFGF--LLG 300
               +   + + +P          G+    ++  +G R     EL F N    G   L G
Sbjct: 350 NYKGLSMFIAEKTPGTDEAPFPTEGMTGGEIE-VLGYRGMKEYELGFDNFKVKGENLLGG 408

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                   + +      + +A  ++   + +L   + YA  R   G  LI  P +   +A
Sbjct: 409 VEGNGFKQLMETFESARIQTAARAIGVAQAALDVGMRYALDRKQFGKALIKFPRVSGKLA 468

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A+++  A  L++  A   DE +    EA  A+++         ++A A    A++  G
Sbjct: 469 MMAVEVMIARQLTYFSAREKDEGRRCDLEAGMAKLL-------GARVAWAAADNALQIHG 521

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G+  E +++R   ++   +I  G+       +   L
Sbjct: 522 GNGFALEYTVSRILCDARILNIFEGAAEIQAQVIARRL 559


>gi|158316346|ref|YP_001508854.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111751|gb|ABW13948.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 384

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 137/374 (36%), Gaps = 16/374 (4%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           DKV           R+    L   ++D  +      +        + + A L      + 
Sbjct: 22  DKVVAPEVGEHERARTFPWELLPQLYDFGYVRGGVPEPLGGDELPMMMQAILMEE---AG 78

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
               +    +     V +  A    S +       P+   S     GLTE   G+D  A+
Sbjct: 79  RCWGSLRTTVNVQGMVARTLAAA-ASEDQRARFLQPLLAGSRFGWFGLTEPGAGSDAGAL 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQ 273
            +  +  SDG        +  ++   D  I+ A+V    G    V  LL D + +     
Sbjct: 138 RTTARASSDGYVVNGSKLYITNALGCDFGILFARVIDHDGTDHGVSALLVDAAESEFGVH 197

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRV 330
            + + +  RS  + EL F +TF      L    G +           L+ A+ +V   + 
Sbjct: 198 DIPH-MPLRSTTSCELSFHDTFVPAANVLGTLGGGLSLGMKAVNAGRLNMAMGAVGLSQA 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L  +I + R+R   G  +    ++++ + +IA     +  L +  A + D  +    E 
Sbjct: 257 CLEASIAFCRQREQFGKPIAAFQLIQQMVVEIATLTETSRLLGYNAARAIDAGEPGRYE- 315

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   + KY+C + A      A++  GG+G +EE  + R++R++   +I  G+    
Sbjct: 316 ------CSMAKYYCGESAGRAATLALQVHGGAGLMEESPVERYFRDAREATIPEGTSQIQ 369

Query: 451 VLDVLNLLEKGTNL 464
           +L +   L   + L
Sbjct: 370 ILHLGKALLGHSAL 383


>gi|30584841|gb|AAP36673.1| Homo sapiens glutaryl-Coenzyme A dehydrogenase [synthetic
           construct]
 gi|61371916|gb|AAX43755.1| glutaryl-Coenzyme A dehydrogenase [synthetic construct]
 gi|61371921|gb|AAX43756.1| glutaryl-Coenzyme A dehydrogenase [synthetic construct]
          Length = 439

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|84501929|ref|ZP_01000087.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389924|gb|EAQ02558.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 391

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 121/382 (31%), Gaps = 29/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P    WD  E  P   A   +    G         +                    
Sbjct: 21  REFAPMAAHWDDKEEFPT--ANRDKLAELGYLGMFIPEEYGGSGAPVIQGTVFLEEMARV 78

Query: 145 QLEAGHLMSPSVTS-ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +    +   +  ++++      K + P              M      I + ++
Sbjct: 79  CFNTALVSQLYLNGPSRAISVLGNEEQKKRFLPD-------------MAAGRKFIAIAIS 125

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+ +  + +   K  DG        W   + ++D  ++  +     G   +   + 
Sbjct: 126 EPEAGSAVTDLRTTATKDGDGWVLNGNKCWSTGAHVADYALVFCRFGKASGAKGIGAFVV 185

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILI 316
           D    G     +  K+G R     E+   N              + + S   +       
Sbjct: 186 DLKKPGARIGHISLKMGGRGLTEAEIILENYKAGPEDVLVEGDPESSRSFALLMSSFGPE 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + +A M V   + +   A  Y+  RH  G  + +   ++  IAD+A  + AA  + +R 
Sbjct: 246 RVGNAAMCVGLAQGAFDAAKAYSEIRHQFGRPIKEFQGLQWKIADMATQVHAARLMVYRA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A       + +       + A + K +  +MA  V  EA++  G +GY  E  + R  R+
Sbjct: 306 AT------NPAPNGFPDPMDATMAKLYANEMAQKVTNEALQIHGHNGYTREYPLERMVRD 359

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +   ++  G+   +   +  ++
Sbjct: 360 ARGFALGGGTVEILRNTIAAMV 381


>gi|303279086|ref|XP_003058836.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459996|gb|EEH57291.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 445

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 76/403 (18%), Positives = 136/403 (33%), Gaps = 33/403 (8%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +       I  G+  + W       +   A              
Sbjct: 50  PNVHEWDEKKSLPLELYRKTYEAGILPGVVGAPWAGGMGNDLSVPAP-------ERFDYF 102

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLT 203
               ++       S   L           P +    S          + +    I L +T
Sbjct: 103 HELIILDEFGRCGSGGVLWGLLEGVHIGLPPVLNFGSEALRRRVGLNVLRGEKTICLCIT 162

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E   G+D+A I    ++ +DG  Y +SG K ++++ +   +  +A   G  G   +  L+
Sbjct: 163 EPWAGSDVANIRCVAKRSADGTKYVVSGEKKWITNGIWADYFTVAVRTGGPGMGGISLLV 222

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN------------VSTG 307
            + +  G+  +R+ + +G  ++ T  + F +       L+G+ N                
Sbjct: 223 VEKTMKGVETKRM-DCMGVWASGTTFVTFDDVEVPAENLIGEENQARSILHWSSYDRGFK 281

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            V            + +    RV   EA  YA RR   G  LI+ PV++  +AD+A  I 
Sbjct: 282 YVMHNFNHERWGFVVQANRFARVCYEEAFKYAHRRRTFGKKLIEHPVIRAKLADMARQID 341

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A  A+   +              A A +   + K    K+      EA +  GG+ Y   
Sbjct: 342 ATHAMMETITYQMCTMTREESAKALAGV-TALAKVQATKVFEYCAREAAQIFGGASYTRG 400

Query: 428 R---SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                + R YR+  A +I  GS   M+   +    K     + 
Sbjct: 401 GVGEKVERLYRDVRAYAIPGGSEEIMMDLGIRQAMKEWESAQA 443


>gi|4503943|ref|NP_000150.1| glutaryl-CoA dehydrogenase, mitochondrial isoform a precursor [Homo
           sapiens]
 gi|2492631|sp|Q92947|GCDH_HUMAN RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|1549327|gb|AAB08455.1| glutaryl-CoA dehydrogenase [Homo sapiens]
 gi|1905909|gb|AAB51174.1| glutaryl Co-A dehydrogenase [Homo sapiens]
 gi|12803505|gb|AAH02579.1| Glutaryl-Coenzyme A dehydrogenase [Homo sapiens]
 gi|30582251|gb|AAP35352.1| glutaryl-Coenzyme A dehydrogenase [Homo sapiens]
 gi|60655133|gb|AAX32130.1| glutaryl-coenzyme A dehydrogenase [synthetic construct]
 gi|60655135|gb|AAX32131.1| glutaryl-coenzyme A dehydrogenase [synthetic construct]
 gi|119604730|gb|EAW84324.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|119604732|gb|EAW84326.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens]
 gi|158261837|dbj|BAF83096.1| unnamed protein product [Homo sapiens]
          Length = 438

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|220924380|ref|YP_002499682.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219948987|gb|ACL59379.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 560

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 145/393 (36%), Gaps = 48/393 (12%)

Query: 92  ERWDKVEFHPAWHALLRR-----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            R+ + E  P  H   ++               G+        +  +   +      +  
Sbjct: 186 RRFGQAEVVPHAHEWHQKNAYIPIEIIGQMAELGVFGLTIPEEYGGMGLPKISMCVVSEE 245

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A +  G L + S  +A ++    T    + + PKI S E  PT              
Sbjct: 246 LSRAYIGVGSLGTRSEIAAELILCGGTEEQKQRFLPKIASGEILPTAV------------ 293

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLV 258
             TE   G+D+A++ ++  +  D      G+K +++ P+ +D   +L + +    G   +
Sbjct: 294 -FTEPNTGSDLASLRTKAVREGDVWKVY-GNKTWITHPVRADLMTILVRTKPEEPGHRGL 351

Query: 259 PRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STG 307
             LL +             GL    ++  +G R     EL F          L      G
Sbjct: 352 SLLLGEKPRGNDENPFPVEGLSGGEIE-VLGYRGMKEYELAFDGFSVPAKNLLGEVEGKG 410

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M+      + +A  +V   + +L   + YA  R   G  L+  P +   +A +A++
Sbjct: 411 FTQLMQTFESARIQTAARAVGVAQSALDIGLRYAEERVQFGKPLVAFPRVSDKLAMMAVE 470

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I  A  L++  A+  DE K    EA  A+++A        ++A A    A++  GG+G+ 
Sbjct: 471 INIARQLTYFAAHEKDEGKRCDLEAGMAKLLAA-------RVAWASADNALQIHGGNGFA 523

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  I+R   ++   SI  G+       +   L
Sbjct: 524 LEYQISRVLCDARILSIFEGAAEIQAQVIARRL 556


>gi|299533491|ref|ZP_07046871.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
 gi|298718548|gb|EFI59525.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44]
          Length = 380

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 131/367 (35%), Gaps = 23/367 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           WD+    P    L R++   GL    +            H +RAA    + +    +  S
Sbjct: 29  WDEAGEFP--RQLYRQAAELGLLGIGYPEELGGTA--ATHSLRAALWLALCR----YGGS 80

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             V ++ +   +  P V       + S          +        L +TE  GG+D+AA
Sbjct: 81  GGVLASLLSHNIGLPPVVA-----LGSDALKQQVVPDVLLGRKIAALAITEPGGGSDVAA 135

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCY 272
           + +  ++     Y + G K F++S M   +I +A   G   G   +  +L  G   GL  
Sbjct: 136 LRTWARRDG-HEYVIEGEKTFITSGMRADWITVAVRTGEERGASGISLILVPGGSEGLRR 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
             L +K+G + + T  L F         LLG        +        L  A  ++   +
Sbjct: 195 SPL-HKMGWQCSDTAHLLFDGVRVPASHLLGAEGEGFRAIMQNFNGERLGIACGALGFAQ 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               EA+ +A++R   G  L    V++  + D+   + +  A    +    D   S ++ 
Sbjct: 254 ACYDEALAWAQQRQTFGVTLNQHQVIRHKLVDMQQRLRSTEAWLNAVCARADGGDSGADW 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++    K    +        A++ +GG G++      R YRE    +I  G+   
Sbjct: 314 VGEVCVL----KNHATQTMQFCADTAVQILGGMGFMRGTLSERIYREVKVLTIGGGTEEI 369

Query: 450 MVLDVLN 456
           M      
Sbjct: 370 MKELAAR 376


>gi|149915588|ref|ZP_01904114.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149810480|gb|EDM70323.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 386

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 102/290 (35%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            +         P  +      L +TE   G+D+  +    ++   G + L+G K F+S  
Sbjct: 101 CTGAQRDRYLLPAVRGERMDALAMTEPDAGSDVRGMKCSARREG-GDWVLNGTKHFISGA 159

Query: 239 MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               F+++    G     R     +   L D    G   +     + +R    + LEF +
Sbjct: 160 DHADFVIVFLATGEDMTDRGPKKRITTFLVDRGTPGFTIRDGYRSVSHRGYKNMILEFDD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     + +      +  A MSV   R     A+  A  R   G  + 
Sbjct: 220 CRLPDDKVLGEVDGGFAVMNEWLYATRITVATMSVGRARRCFDYALGQAAERRQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   IAD+  +I AA  L+   A   D+          A       K +  +M   
Sbjct: 280 RFQGVGFQIADMITEIDAADFLTLAAAWRLDQGL-------LANREIASAKLYATEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           V    ++  GG G +++  I R +R++    I  G+       +   L +
Sbjct: 333 VSDATLQIHGGMGLMDDLPIERFWRDARVERIWDGTSEIQRHIISRELLR 382


>gi|295135469|ref|YP_003586145.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294983484|gb|ADF53949.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 454

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 131/368 (35%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ +F      ++ +     +    ++    P +      I A  +  +    +     
Sbjct: 105 WNRAKFP---FEIIEKFKKLNIAGIPYEGYGCPNLPFLMEGIIAQEIARVDVSTSTFFGV 161

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + L  +    + W P+             MQK       GLTE   G+ +A 
Sbjct: 162 HSGLAMGSIYLCGSEEQKQKWLPQ-------------MQKLEKIGAFGLTEPNVGSGVAG 208

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  +   +        KW  ++  +D  I+ A+ E           L +    G   
Sbjct: 209 GLETTCKFDGENWILNGQKKWIGNATFADVTIIWARDEDSNQVKG---FLVEKDNPGFKA 265

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           +++++K+  R      +  ++        L  +    +   +  +     A  +V   R 
Sbjct: 266 EKMEDKMALRIVQNAIITLTDCKVAESDRLQNANSFKDTANVLRMTRAGVAWQAVGCARG 325

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y R+R   G  +    +++  + ++  ++ A   L FRL+   D+     E A
Sbjct: 326 AYESALKYTRKREQFGRPIASYQLVQNHLVEMVSNLTAMQTLCFRLSEMQDQDMLTDEHA 385

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C      V++ A E +GG+G + E  +AR   ++ A     G+    
Sbjct: 386 SLA-------KVYCSMRMRDVVSRAREVMGGNGILLEHDVARFVADAEAIYSYEGTKEIN 438

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 439 SLIVGRAI 446


>gi|295132389|ref|YP_003583065.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294980404|gb|ADF50869.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 391

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 133/351 (37%), Gaps = 40/351 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS------ASMVALMTT 167
           GL        + P     A   + +   +M ++E G     S  S         +    +
Sbjct: 57  GLADIGAFGPYIPEDYGGAGLDQISYGIIMQEIERGDSGIRSTASVQSSLVMYPIYAYGS 116

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + PK+ + E             +    GLTE   G++   + +  +   D    
Sbjct: 117 EEQKKKYLPKLAAGE-------------LIGCFGLTEPDFGSNPGGMLTNFKDKGDHYLL 163

Query: 228 LSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                W  ++P +D  ++ A+  EGR+   +V R +E     G       NK   R++AT
Sbjct: 164 NGAKLWISNAPFADIAVVWAKNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASAT 218

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
            EL F+N        L    G       L  LDSA   ++   +  A      A+ YA+ 
Sbjct: 219 GELIFNNVKIPKENLLPQKNGLGA---PLGCLDSARYGIAWGAIGAAMDCYDTALRYAKE 275

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + ++ + ++ +A++  +I  A  L++RL    +E K+ S + + A+       
Sbjct: 276 RIQFGKPIAEKQLQQKKLAEMITEITKAQLLAWRLGTLKNEGKASSAQISMAKR------ 329

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                MA  +  EA + +G  G   E SI RH     +     G+ +  +L
Sbjct: 330 -NNVDMALKIAREARQVLGAMGITGEYSIMRHMMNLESVVTYEGTHDIHLL 379


>gi|260169|gb|AAB24226.1| glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, 438 aa]
 gi|2316112|gb|AAC52079.1| glutaryl-CoA dehydrogenase [Homo sapiens]
          Length = 438

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|300711382|ref|YP_003737196.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125065|gb|ADJ15404.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 381

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 67/404 (16%), Positives = 133/404 (32%), Gaps = 32/404 (7%)

Query: 59  ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           ELL E V+   A+E+   A     +     P  E   +   +P    +L      GL   
Sbjct: 2   ELLSEDVVPEYAREVKEEAREFADE--HIAPNAEECFRKGEYP--WEILEAGQEAGLVAQ 57

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
                           +  A  +  A       +  +   A M+         +++    
Sbjct: 58  DIPEELGGRGFDVVEMLAIAEEFYKADAGIALTLQLASFGAEMIYEYGNEAQKEEYIE-- 115

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
                      P+       GL ++E   G+D+A +T+  +K  D         W  +  
Sbjct: 116 -----------PVAAGEQITGLAVSEPDTGSDLAGMTTTAEKDGDEYVINGEKYWIGNGV 164

Query: 239 MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
            +D   +  +      R        ++      G   + +  K+G R++    + F +  
Sbjct: 165 EADWVTVFVRTSEENDRYSNH--SMIIVPTDAAGYEAEHIPEKMGMRASKQAHITFEDVR 222

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                L+G  N     + +      +      +     ++ EA  +   R   G  + + 
Sbjct: 223 VPEENLVGFENGGFLMLAEFFNHGRIVVGGHGLGMAAAAIEEAWEFVHDREAFGRGVNEF 282

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD+ L+  AA AL++R A    + ++       A + A + K    + A    
Sbjct: 283 QAVQHGLADMRLEFEAARALNYRAAKKVRDGEN-------AGLWAAMAKTKSTETATMCA 335

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + M+  GG   + +R IAR YR+     I  G+       +  
Sbjct: 336 EQGMQFHGGRSILTDRRIARVYRDVRIPVIYEGANEVQRNLIYR 379


>gi|114765518|ref|ZP_01444626.1| isobutyryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114542111|gb|EAU45143.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 562

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 147/398 (36%), Gaps = 47/398 (11%)

Query: 85  HAYGPGGERWDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       DKVE F   WH         ++      G+        +      +A   
Sbjct: 186 EQFRRYA--VDKVEPFAHEWHLKDELIPMEVIEELAEMGVFGLTIPEEYGGFGLSKASMC 243

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T    + W P + S E  PT         
Sbjct: 244 VVSEELSRGYIGVGSLGTRSEIAAELIIAGGTEEQKQKWLPALASGEKLPTAV------- 296

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV- 253
                  TE   G+D+ ++ ++  K  +G Y ++G+K +++ +  +    +LA+ +    
Sbjct: 297 ------FTEPNTGSDLGSLRTRAVKDENGDYTVTGNKTWITHAARTHVMTLLARTDPSTD 350

Query: 254 GCFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSN--TFGF--LLG 300
               +   L + +P          G+    ++  +G R     EL F      G   L G
Sbjct: 351 NYKGLSMFLAEKTPGTDAEPFPTEGMTGGEIE-VLGYRGMKEYELGFDGFKVKGENLLGG 409

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           +       + +      + +A  ++   + +L   + YA  R   G  LID P +   +A
Sbjct: 410 EEGKGFKQLMETFESARIQTAARAIGVAQAALDVGMRYAEDRKQFGKSLIDFPRVSGKLA 469

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A++I  A  L++  A   DE      EA  A+++         ++A A    A++  G
Sbjct: 470 MMAVEIMIARQLTYFSAREKDEGIRCDLEAGMAKLL-------GARVAWANADNALQIHG 522

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G+  E +++R   ++   +I  G+       +   L
Sbjct: 523 GNGFALEYTVSRILCDARILNIFEGAAEIQAQVIARRL 560


>gi|312129973|ref|YP_003997313.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906519|gb|ADQ16960.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 452

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 129/358 (36%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+ +    GL    ++    P +      + A  +  +    A      S  S   + 
Sbjct: 111 FELIPKMGDLGLAGVTFEGYGCPNLPYMMEGVLAMEMARVDASIATFFGVQSGLSMGSIY 170

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           L  +    ++W PK             M +       GLTE   G+  A  +T+  ++ +
Sbjct: 171 LCGSEEQKQEWLPK-------------MNRMEKIGAFGLTEPEVGSGAAGGLTTTCKQTA 217

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG       KW  ++  +D  I+ A+             L      G+  +++K K+  R
Sbjct: 218 DGWVLNGQKKWIGNATFADVIIIWARDVDSGEVKG---FLVRKENPGVHVEKIKGKMALR 274

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +   +        L  +    +   +  +     A M+V   R +   A+ Y +
Sbjct: 275 IVQNGLITLKDCIVEEKDRLPHANSFKDTANVLRMTRAGVAWMAVGCARGAYENALEYTK 334

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  + ++  ++ A   L +RL+   DE K + E A+ A       
Sbjct: 335 TRKQFGKPIASFQLIQNHLVEMISNLTAMQTLVYRLSELQDEDKLKDEHASLA------- 387

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +C      ++  A E +GG+G + + ++AR   ++ A     G+     L V   +
Sbjct: 388 KVFCTLRTRDIVRGAREVMGGNGILLDYNVARFVADAEAIYSYEGTKEINTLIVGRSI 445


>gi|332530999|ref|ZP_08406921.1| butyryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
 gi|332039560|gb|EGI75964.1| butyryl-CoA dehydrogenase [Hylemonella gracilis ATCC 19624]
          Length = 619

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/577 (17%), Positives = 198/577 (34%), Gaps = 106/577 (18%)

Query: 40  DSLLVALI--------ANFPSVVHKELELLG---EYVLSCTAQELARMANYNTPQLHAYG 88
           D LL   +          +     +  + +    E +         R+ + + P+     
Sbjct: 2   DFLLHDWLHAETLTQRQRYAEHSRETFDAVLDTCERIAREKYAPFNRLIDTDEPRTVT-E 60

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P G    +V    A H   R     G+  +  D     +      +  A   + MA +  
Sbjct: 61  PDGSL--RVVLPQATHEAHRAYAESGMLSAAQDHDIGGMQLPYLVEAAANSFFGMASISM 118

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +  +V +A+++ +  T +  + +A K FS ++  T             + L+E + G
Sbjct: 119 GSGL-LTVGNANLLMVHGTEKQKQVFALKEFSGQWSGT-------------MCLSEPQAG 164

Query: 209 TDIAAITSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---- 251
           + ++ I ++                Y L G+K ++S+   +       ++LA++ G    
Sbjct: 165 SSLSDIATKAIPDGADFAQDPLGPRYRLRGNKMWISAGEHELTENIVHLVLAKIPGPDGK 224

Query: 252 ------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS------- 292
                  +  F+VP+ L +      G  N +    L +K G R      L F        
Sbjct: 225 PVPGVKGISLFIVPKKLVNAEGELTGERNDVALAGLNHKCGWRGTTNTLLNFGEGKFPVG 284

Query: 293 ----------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                        G+L+G        +  M     +   + +          A+ YA+ R
Sbjct: 285 QAGGYDGNGAGAVGYLVGQAGEGLRCMFHMMNEARIGIGMAATMLGMAGYHAALDYAKNR 344

Query: 343 HVSGGIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              G  +              I+   +KR +         + AL    A   DE ++ + 
Sbjct: 345 PQ-GRPITGAGKDASQPQIRIIEHADVKRMLLAQKSYCEGSLALLLYCARLVDEQRTGTP 403

Query: 389 EAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           EAA        ++ PI K W  +      + A++  GG GY  +  + +++R+   N I 
Sbjct: 404 EAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDQRLNMIH 463

Query: 444 LGSGNAMVLDVLN---LLEKGTN---LFEQLFSTLEQDLG----SSGKKVITILRDSISL 493
            G+     LD+L     +E G     L  ++ +T+E+ +     +     +      +  
Sbjct: 464 EGTHGVQALDLLGRKVRMEGGRGLSLLAARMNATIERAIQQPELAEHANALAQALQQVGA 523

Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
             +        TE  ALA++   L   G   +A ++L
Sbjct: 524 ATKAAWATENPTE--ALANAVPYLQAFGHVVLAWMWL 558


>gi|327402488|ref|YP_004343326.1| glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
 gi|327317996|gb|AEA42488.1| Glutaryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823]
          Length = 451

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 136/368 (36%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W + EF    H ++ +     +    ++    PV       + A  +  +    A     
Sbjct: 103 WRRGEFP---HHIIPKVAELDICGIAYEGYSNPVRSYLMEGVLAMEMARVDVSFATFFGV 159

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      + L+ +    ++W P++             +        GLTE   G+ +A 
Sbjct: 160 QSGLVMGSIFLLGSEEQKQEWLPEL-------------KNLRKIGAFGLTEPEVGSGVAG 206

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +T + ++I +        KW  ++  +D  I+ A+ E           L      GL  
Sbjct: 207 GLTMKAKRIGNSWTLNGQKKWIGNATFADVIIIWAEDEEDHQVKG---FLVRKDTPGLAV 263

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           +++++K+  R      +  ++     +  L  +    +   +  +     A ++V   R 
Sbjct: 264 EKMEDKMALRIVQNGIITLTDCLVEEVDRLQKANSFKDTANVLRMTRAGVAWLAVGCARG 323

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y R R   G  +    +++  + ++  ++ A   +  RL+   D+ +   E A
Sbjct: 324 AYESALKYTRERKQFGKPIASFQLIQNHLVEMLTNLTAMQTMVARLSELQDQNELTDEHA 383

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C      ++++A E +GG+G + E  +AR   ++ A     G+    
Sbjct: 384 SLA-------KVFCSLRTRDIVSKAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEIN 436

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 437 TLIVGRAI 444


>gi|302518913|ref|ZP_07271255.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
 gi|302427808|gb|EFK99623.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
          Length = 395

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 118/369 (31%), Gaps = 33/369 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           PA   L +     GL     +           + +    L          +      +  
Sbjct: 54  PAVRELAKELGSLGLLGMHLEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMY 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    ++W P++ + E                  GLTE   G+D   + ++ ++
Sbjct: 114 AIHRFGSEEQKREWLPRMATGE-------------AIGCFGLTEPDHGSDPGGMRTRARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++   ++ A+ E  V  F+VP         G     +K+K  
Sbjct: 161 AGDDWVLDGRKMWITNGSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPIKHKGS 215

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++ T EL            L   TG       L  L+ A   +    +  A      A
Sbjct: 216 LRASVTSELLLDGVRLPADAVLPEVTGLR---GPLSCLNEARYGILWGALGAARSCFRTA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  L    + +  +AD+A+++   T L+  L    D    R E+      
Sbjct: 273 LSYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQ------ 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K      A A+   +   +G +G   E  + RH     +     G+     L + 
Sbjct: 327 -VSLGKLNNVNKALAIARTSRTILGANGISLEFPVMRHMANLESVLTYEGTAEMHTLMIG 385

Query: 456 NLLEKGTNL 464
             L   + L
Sbjct: 386 QALTGESAL 394


>gi|332286746|ref|YP_004418657.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
 gi|330430699|gb|AEC22033.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp.
           T7-7]
          Length = 395

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 125/386 (32%), Gaps = 42/386 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-----------Y 141
             D  +   A   L+      G     W R   P         R   +            
Sbjct: 33  NVDHGDTDQACRTLVAELGRAG-----WLRMAVPAGPDGRWGGRWPNIDSRSVCILRETL 87

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A    +     +  +++  +  +   + P++ S                     
Sbjct: 88  ARHDGLADFAFAMQGLGSGAISIAGSDALRDAYLPRVASG-------------QAIAAFA 134

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D+AA++       D         W  +  ++D + +  +     G   +   
Sbjct: 135 LSEPDAGSDVAALSCSATPDGDDYVLNGRKTWISNGGIADFYCVFVRTGEAPGARGISAF 194

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYL 318
           + D    GL        +     AT  L F          L     G    M  L     
Sbjct: 195 VVDADTPGLTIAERIEVMAPHPLAT--LSFDQCRVSASQRLGQAGQGFKIAMMTLDIFRS 252

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   R +L EA+  A  R + G  L D  + + A+ D+A +I AA  L++R A 
Sbjct: 253 SVAAAALGFARHALDEALSRATSRRMFGQALADLQLTQAALGDMACEIDAAALLTYRAAW 312

Query: 379 SFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             D +    + EAA A++ A        + A  +I  A++  GG+G +    + + YRE 
Sbjct: 313 LRDVKGVRTTREAAMAKMAA-------TESAQRIIDRALQMFGGAGVVSGAPVEKLYREI 365

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTN 463
            A  I  G+     L +   L K   
Sbjct: 366 RALRIYEGATEVQKLIIARELLKDRQ 391


>gi|169846951|ref|XP_001830189.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
 gi|116508772|gb|EAU91667.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis
           cinerea okayama7#130]
          Length = 425

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 112/311 (36%), Gaps = 35/311 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + P++              K  +    GLTE   G+D   +
Sbjct: 135 SSLVMHPINEFGTEAQKEKYLPRL-------------AKGELVGAFGLTEPNHGSDPGGM 181

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +  Q++  G        W  ++P++D FI+ A+   +GRV  F++     +    GL  
Sbjct: 182 ETTAQEVDGGFVLNGSKTWITNAPVADVFIVWARCKWDGRVRGFIL-----EKGMKGLTA 236

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SG 327
             +KNK+  R++AT  +   N        L  S G          L+SA   +       
Sbjct: 237 PAIKNKVALRASATGSIFMDNVSVPHDALLPKSRGLSSAF---SCLNSARYGISWGVMGA 293

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +   LA    YA  R+     L    ++++ + D   +IA     S ++    D+ K   
Sbjct: 294 LEDCLARTREYALERYQFKRPLASFQLVQKKLVDAHTEIALGLQSSLQVGRLKDQGKV-- 351

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A  M  + K   C  A       ++ +GG+   +E  + RH       +   G+ 
Sbjct: 352 -----APEMISLVKRNNCGKALQHARILIDILGGNASADEYHVGRHVANLQVTNTYEGTH 406

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 407 DIHALILGKAI 417


>gi|240138818|ref|YP_002963293.1| isobutyryl-CoA dehydrogenase [Methylobacterium extorquens AM1]
 gi|240008790|gb|ACS40016.1| isobutyryl-CoA dehydrogenase [Methylobacterium extorquens AM1]
          Length = 562

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 143/368 (38%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGLTIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P I S +  PT                TE   G+D+A++ ++  K  D  
Sbjct: 274 GTEEQKQRFLPGIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKDGDH- 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + +SG+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKISGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGTDEQPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F +       L       G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEDFAVPANNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYKISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|163851651|ref|YP_001639694.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163663256|gb|ABY30623.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 562

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 143/368 (38%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGLTIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P I S +  PT                TE   G+D+A++ ++  K  D  
Sbjct: 274 GTEEQKQRFLPGIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKDGDH- 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + +SG+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKISGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGTDEEPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F +       L       G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEDFAVPANNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYKISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|238491502|ref|XP_002376988.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|317146005|ref|XP_001821225.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
 gi|220697401|gb|EED53742.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 543

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 142/438 (32%), Gaps = 35/438 (7%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  ++  S      + + +  H  L       +    +          P +  +  
Sbjct: 117 PYGDLIPFADPSWYQGYSSPYFNQTHAALRAEVRQWVESEIE----------PYVTEWDE 166

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D +     +  +  R    GL    +         +          + M   +  
Sbjct: 167 AKNVPDHI-----YKQMGERGYLAGLLGGKFPVDHTKNRVQSVAPENWDLFHEMLLTDEL 221

Query: 150 HLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +++       P + K     +  R         +      I L +TE   
Sbjct: 222 SRAGSGGLVWNLIGGYGIGCPPLVKYGKKPLVDR-----ILPGILNGDKRICLAITEPDA 276

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL +  
Sbjct: 277 GSDVANLTCEAKLTPDGKHYIVNGEKKWITNGVYADYFTTAVRTGGPGMNGLSVLLIERE 336

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  +R+ +  G  S+ T  + F +       L+G  N     +        +   I 
Sbjct: 337 HGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGIVIQ 395

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                RV   EA+ YA +R   G  LID PV++  +A +A  I A       L N   + 
Sbjct: 396 CCRFARVCYEEAVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEATYNW---LENIIYQC 452

Query: 384 KSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
           +S  E  A  ++   I                EA +  GG  Y        + R YR+  
Sbjct: 453 QSMDETEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKVERLYRDVR 512

Query: 439 ANSILLGSGNAMVLDVLN 456
           A +I  GS   M+   + 
Sbjct: 513 AYAIPGGSEEIMLDLSMR 530


>gi|312602430|ref|YP_004022275.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312169744|emb|CBW76756.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 381

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 134/402 (33%), Gaps = 37/402 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIW 120
              L   A   AR       QL            V     WH         GL       
Sbjct: 9   RIALREQAARFARD------QLST-DIAASDRLSVFHRDGWHRC----AEFGLFSMAIPE 57

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS-ASMVALMTTPRVHKDWAPKIF 179
           DR        +   +     Y    L     ++  + + A  +A+  TP     + P + 
Sbjct: 58  DRGGAGATLSELLAVMEGLGYGSEDLGLLFSLNAHLWTVALPLAIHGTPTQRSRFLPGL- 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                          S+      TE   G+D+ ++ +Q  +  DG        +  ++P+
Sbjct: 117 ------------MDGSLIGANASTEDEAGSDVFSMRTQAIRDGDGYVLNGSKTYITNAPI 164

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A ++  +G   V   L + +  GL       K+G R+     +   +      
Sbjct: 165 ADLCVVYATIDPTLGPLGVTAFLVETTNPGLDLSPPLEKMGLRTAQMGRITLKDCRVPAD 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L      V+  +  +  +   +   ++  MR  L   I +AR R   G  +     + 
Sbjct: 225 AILGREGRGVKVFESAMEYERGCILATTLGAMRRHLEACITHARTRRQFGQPIGKHQAVS 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ +++ AA  L +R+    D  K  + EAA         K +  +       +A+
Sbjct: 285 HRLADMKVNLDAACELVYRVGRLKDAGKDATLEAA-------CAKLFVSEAYTKFSIDAL 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              G  GY+ +    R  R++ A+ +  G+ +     +   L
Sbjct: 338 RIYGAQGYLAQTPTERGLRDAIASLLYSGTSDIQRNIIATEL 379


>gi|254509608|ref|ZP_05121675.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
 gi|221533319|gb|EEE36307.1| isobutyryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11]
          Length = 563

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 137/363 (37%), Gaps = 36/363 (9%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G+        F      +A     +       +  G L + S  +A ++    T   
Sbjct: 220 AEMGVFGLTIPEEFGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELIIAGGTDEQ 279

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             +W PK+ S E  PT                TE   G+D+ ++ ++  K +DG Y ++G
Sbjct: 280 KANWLPKLASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDNDGNYKITG 326

Query: 231 HKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQRLKNKI 279
           +K +++ +  +    +LA+          +   L + +P          G+    ++  +
Sbjct: 327 NKTWITHAARTHVMTLLARTNPDSTDHRGLSMFLAEKTPGTDENPFPTPGMTGGEIE-VL 385

Query: 280 GNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G R     EL F          L G+       + +      + +A  ++   + +L  A
Sbjct: 386 GYRGMKEYELGFDGFEVKGKNLLGGEEGKGFKQLMETFESARIQTAARAIGVAQSALDIA 445

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D  +    EA  A++
Sbjct: 446 MQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMIARQLTYYSAWEKDHGQRCDLEAGMAKL 505

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +         ++A A     ++  GG+G+  E  I+R   ++   +I  G+       + 
Sbjct: 506 L-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEIQAQVIA 558

Query: 456 NLL 458
             L
Sbjct: 559 RRL 561


>gi|326389073|ref|ZP_08210655.1| glutaryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206673|gb|EGD57508.1| glutaryl-CoA dehydrogenase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 406

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 146/432 (33%), Gaps = 45/432 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
             L     + P  +  +L    E +L   A+  A  A    P++ A        D+    
Sbjct: 13  PDLARFEWDDPFRLESQLSEE-ERMLRDAARAYA--AEKLQPRVIAAFR-----DET-TD 63

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           PA    +      GL       ++  +     A+ + A  +  +       +   S    
Sbjct: 64  PAIFREMG---EMGLLGPTTPEAYGGIGASYVAYGLIAREVERVDSGYRSMMSVQSSLVM 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      + P++ + E+                 GLTE   G+D A + +  +
Sbjct: 121 YPIYAYGTEEQRLKYLPRLANGEW-------------IGCFGLTEPDAGSDPAGMKTIAR 167

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K + G        W  ++P++D F++ A+ E   G   +   + +    GL   ++  K+
Sbjct: 168 KTAGGYVLNGSKTWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGVKGLSAPKIAGKL 225

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHY 338
             R++ T E+   +         +     VE +K     L+ A   +S   +  AE   +
Sbjct: 226 SLRASITGEIVMQDVEV----GEDALLPHVEGLKGPFGCLNRARYGISWGVLGAAEFCFH 281

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L    + +  +AD+   I      S ++    D A++       A
Sbjct: 282 AARQYGLDRKQFGKPLAGTQLFQLKLADMMTQITLGLQASLQVGRLLDRAEA-------A 334

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K      A  +   A +  GG+G  EE  + RH       +   G+ +   L 
Sbjct: 335 PEMISLVKRNNAGRALEIARMARDMHGGNGIQEEYQVIRHMVNLETVNTYEGTHDIHALI 394

Query: 454 VLNLLEKGTNLF 465
           +   +      F
Sbjct: 395 LGRAITGLQAFF 406


>gi|226309268|ref|YP_002769228.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188385|dbj|BAH36489.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 611

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/543 (17%), Positives = 189/543 (34%), Gaps = 78/543 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  +        A   A  A+ N      +         V         +      G   
Sbjct: 42  LAEVARLAEGPVAASFA-DADRNP---VEFDAPNH---AVVVPEPLRKTVEAVNEAGWSR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    V    A  + A    L+A   +    +     AS++  +      K WA +
Sbjct: 95  LGLPEDMGGVPAP-APLVWAIGEMLVAANGSASFFNMGPLMASVLYTIGN-EQQKHWAKE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
            F R +  T             + LTE   G+D+ A  ++     DG + + G K F+S 
Sbjct: 153 GFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEGVKRFISG 199

Query: 238 PMSDA------FIMLAQVEG------RVGCFLVPR------LLEDGSPNGLCYQRLKNKI 279
                       ++LA+ EG       +  F VP+       LE G  NG+    +++K+
Sbjct: 200 GDVGDTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSDTLELGERNGVYVTGVEHKM 259

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+GD++     +  +     +     +   +      A
Sbjct: 260 GLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMVGTKATGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R                  +   P ++R++A          A+    A   +  
Sbjct: 320 LEYAKERIQGADLTELTNKTAPRVAITHHPDVRRSLAMQKAYAEGLRAVYLYTAAHQNAD 379

Query: 384 KSRSEEAAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +     A A + A       PI K    + A  ++ E+++ +GGSGY+++  I ++ R+
Sbjct: 380 VAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTLGGSGYLQDYPIEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDS 490
           +  +++  G+      D        ++G  L     ++   ++ + G+   K   +L ++
Sbjct: 440 AKIDTLYEGTTAIQAQDFFFRKIARDRGVALAHVAGRIREFIDSEAGNGRLKAERVLLET 499

Query: 491 ISLCKEDKGLARFLTEK-IALASSAAALYRAGMN------DIADVFLENRFLDNCHSTHC 543
                + + +A  LT   +A     + LY+ G+        + D+ +  R L        
Sbjct: 500 --ALTDVQEMAGTLTGYLMASQDQPSELYKIGLGSVRFLYAVGDLLIGWRLLVQAEVALA 557

Query: 544 MLH 546
            L 
Sbjct: 558 ALD 560


>gi|254485996|ref|ZP_05099201.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
 gi|214042865|gb|EEB83503.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
          Length = 392

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 126/366 (34%), Gaps = 26/366 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            PAW AL ++    GL        +          I A         + G  ++ +    
Sbjct: 47  DPAWRALWQKCGDFGLFGLGVPEEYGGAGHDVLTTIMALEAIGQGCRDNGLTLAINGHIW 106

Query: 160 SM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
           ++   +    +    K + P +                S+    GLTE+  G+D   +T+
Sbjct: 107 TVLYPILAFGSDAQKKKYVPGLCDG-------------SLVGAHGLTERETGSDAMKMTT 153

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             ++   G        +    P  D  I+ A+ +   G + V   L + S  G       
Sbjct: 154 TARERDGGFVLNGAKAFVGMGPACDLAIVFAKTDPDKGAWGVSAFLVETSDAGFIRGAAD 213

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G R+     L F N +     LLG +       +              V  M   L 
Sbjct: 214 EKMGLRTVPLGPLGFDNCWIPKDRLLGPVGAGMSIFQHTMEWERCFIFSSHVGAMARQLK 273

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +   YAR R   G  +ID   +   +AD+ L +  +  L +R A+  D+ +    EAA A
Sbjct: 274 DCTAYARSRETFGVPIIDHQSVSNRLADMRLRLETSRLLLYRAASLKDKKRPAPLEAAMA 333

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++                  +A+   GG GY+    + R  R++ A  I  G+ +     
Sbjct: 334 KLHISEAFAASS-------LDAVRIFGGRGYLSADGVERDLRDATAGLIYSGTSDIQRQI 386

Query: 454 VLNLLE 459
           +  LL+
Sbjct: 387 IARLLD 392


>gi|241744197|ref|XP_002405433.1| glutaryl-CoA dehydrogenase, putative [Ixodes scapularis]
 gi|215505783|gb|EEC15277.1| glutaryl-CoA dehydrogenase, putative [Ixodes scapularis]
          Length = 390

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 128/374 (34%), Gaps = 38/374 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+                ++ + A  +  +       +   S      + 
Sbjct: 47  RDIMYEMGELGVLGLTLQGFGCAGSSYVSYGLIAREVERVDSGYRSAMSVQSSLVMLPIY 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T      + PK+   E             +    GLTE   G++   + ++    S 
Sbjct: 107 LFGTSAQKDKYLPKLARGE-------------LVGCFGLTEPNHGSNPGGMETRAVHDSK 153

Query: 224 G-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y L+G K W  +SP++D F++ A+ +       +   + +    GL   +++ K   
Sbjct: 154 AKTYTLNGSKTWITNSPIADVFVVWAKCDDGQ----IRAFVLEKGTKGLEAPKIEGKFSL 209

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336
           R++ T  +   +        L  S G     +    L SA   +S   +  AE     A 
Sbjct: 210 RASTTGMILMEDVVVPEDALLPKSLGLKSTFQ---CLTSARYGISWGALGAAEFCLETAR 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R      L    ++++ +AD+  +I+       R+    DE K   E       M
Sbjct: 267 QYTLDRIQFKSPLAKNQLVQKKLADMLTEISLGLQGCLRVGRLMDEGKVCPE-------M 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  +  +   A + +GG+G  +E  + RH     A +   G+ +   L    
Sbjct: 320 VSLLKRNSCGKSLDIARAARDMLGGNGISDEYHVIRHVMNLEAVNTYEGTHDVHAL---- 375

Query: 457 LLEKGTNLFEQLFS 470
           +L +G    +   +
Sbjct: 376 ILGRGITGLQAFTA 389


>gi|323447981|gb|EGB03886.1| hypothetical protein AURANDRAFT_60346 [Aureococcus anophagefferens]
          Length = 425

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 120/368 (32%), Gaps = 31/368 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
            AL  R    GL     D S                    A    A   ++ S+   + V
Sbjct: 74  RALFARCGELGLLGVTADESCGGSGMDAVAACVVHEELSAADPAFALSYLAHSMLYVNNV 133

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  +    + W P                  S    + ++E   GTD+  + +      
Sbjct: 134 NLNASEDQKRRWLPG-------------ACDGSKVCAMAMSEPGAGTDVLGMRTAAVDAG 180

Query: 223 DGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ-RLK 276
           D         W  +       + D  ++ A+     G   V          G     R+ 
Sbjct: 181 DHYVLNGSKMWITNGCVDSETLGDGALVYART--GPGRADVSLFHVGPENPGFSLGQRIT 238

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLA 333
            K+G R++ T EL F +        ++   G    M     L  +  A M+V   +  + 
Sbjct: 239 GKLGMRASPTAELVFEDCVVPKEDLVSEWNGAALCMMRNLELERVVLAAMAVGIAKRCVD 298

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               YA  R   G  + +   M+R +A+    + AA A  +  A   D   + +      
Sbjct: 299 RMGKYAAERVAFGRPIAEFGQMQRHVAEGYAKLMAARAYLYATAVDLDLTSTGNR----- 353

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            +     K +   +A  V   A++  GG GY+ E  + + +R++    I  G+  +   +
Sbjct: 354 -LDTDGVKLFATTVAKEVADAAIQVHGGYGYVAEYQVEQLWRDAKLLEIGGGTLESHHKN 412

Query: 454 VLNLLEKG 461
           ++  L +G
Sbjct: 413 MIRDLAEG 420


>gi|83769086|dbj|BAE59223.1| unnamed protein product [Aspergillus oryzae]
          Length = 539

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 142/438 (32%), Gaps = 35/438 (7%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +  +  ++  S      + + +  H  L       +    +          P +  +  
Sbjct: 113 PYGDLIPFADPSWYQGYSSPYFNQTHAALRAEVRQWVESEIE----------PYVTEWDE 162

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D +     +  +  R    GL    +         +          + M   +  
Sbjct: 163 AKNVPDHI-----YKQMGERGYLAGLLGGKFPVDHTKNRVQSVAPENWDLFHEMLLTDEL 217

Query: 150 HLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                     +++       P + K     +  R         +      I L +TE   
Sbjct: 218 SRAGSGGLVWNLIGGYGIGCPPLVKYGKKPLVDR-----ILPGILNGDKRICLAITEPDA 272

Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL +  
Sbjct: 273 GSDVANLTCEAKLTPDGKHYIVNGEKKWITNGVYADYFTTAVRTGGPGMNGLSVLLIERE 332

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  +R+ +  G  S+ T  + F +       L+G  N     +        +   I 
Sbjct: 333 HGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGIVIQ 391

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                RV   EA+ YA +R   G  LID PV++  +A +A  I A       L N   + 
Sbjct: 392 CCRFARVCYEEAVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEATYNW---LENIIYQC 448

Query: 384 KSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
           +S  E  A  ++   I                EA +  GG  Y        + R YR+  
Sbjct: 449 QSMDETEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGGKVERLYRDVR 508

Query: 439 ANSILLGSGNAMVLDVLN 456
           A +I  GS   M+   + 
Sbjct: 509 AYAIPGGSEEIMLDLSMR 526


>gi|319764995|ref|YP_004128932.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330827190|ref|YP_004390493.1| acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317119556|gb|ADV02045.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329312562|gb|AEB86977.1| Acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 410

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 144/415 (34%), Gaps = 31/415 (7%)

Query: 59  ELLGEYVLSCT-AQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRRSIHDGL 115
            L G++ LS     E A +AN       A    G R  +V      AW    R    +G+
Sbjct: 9   RLFGDHFLSRLNVDEQAMVANVRR---LARDALGPRAAEVAQRDVFAWDNF-RLLAREGV 64

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
             + + R +     +Q  +IR           +  L++ +  S   +    +        
Sbjct: 65  IGTAFPREYGGTDARQVLRIRIIEELGRVCSASASLVTGADLSCRAIVAGASDDNKARLL 124

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P +              +  +     LTE   G+D+  +++  ++  D        K+  
Sbjct: 125 PALC-------------RGDIQAAFALTEPGAGSDVRGLSTTIRREGDDYVINGRKKFIT 171

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
               +D F+++ +      CF+   +L      G        K+G        L+F +  
Sbjct: 172 RGTTADWFMVVGRAAHDPSCFI--AVLVPRDAAGFAISPEVGKLGWAGVPISSLQFKDVR 229

Query: 296 GFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
             +   LG         +D  I   +  A M++     ++  A  Y   R + G  L + 
Sbjct: 230 AQVSDRLGAEGDGFDLAQDALIRARMGHASMALGRAIGAVEIAAAYMVDRKLFGKSLGEH 289

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
              +  +AD+   + AA AL    A  +D           A I A + K     +   V+
Sbjct: 290 QGAQWMVADMVTQLEAARALVHLAAEKYDSGDPD------AGIFASMAKLQATDLGMKVV 343

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +A++  GG GY+++  + R +R++  N I  GS       +     +     E+
Sbjct: 344 TDALQLTGGRGYLQDFPLERFFRDAKLNQIGEGSSEVHKTVIGRDAIRRVRTLER 398


>gi|169595978|ref|XP_001791413.1| hypothetical protein SNOG_00736 [Phaeosphaeria nodorum SN15]
 gi|111071111|gb|EAT92231.1| hypothetical protein SNOG_00736 [Phaeosphaeria nodorum SN15]
          Length = 554

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 145/409 (35%), Gaps = 31/409 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDR 122
            L    +E          +L    P    W++ +  P   +  L  R    GL    +  
Sbjct: 155 ALREEIREWVEE------KLM---PNVTEWEEAKKVPDEIFRDLGERGYLAGLLGMHYPT 205

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
                  K     +    + M   +            +++       P + K   P++  
Sbjct: 206 QLTDKRVKCVPPEKWDHFHEMIVTDELSRTGSGGLVWNLLGGYGIGAPPLFKFGKPELIK 265

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
           R         + K    I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +
Sbjct: 266 R-----IGPGLLKGETRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGI 320

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              +   A   G  G   V  LL + +  G+  +R+ +  G  S+ T  + F +      
Sbjct: 321 WSDYFTTAVRTGGEGMNGVSVLLIERAAGGVSTRRM-DCQGVWSSGTTYITFEDVKVPVE 379

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G  N     V        +   I S+   RV   E++ YA +R   G  LID PV++
Sbjct: 380 NLIGKENQGFKVVMTNFNHERIGIIIQSLRFARVCYEESVKYAHKRKTFGKRLIDHPVIR 439

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAE 414
             +A +A  I A+      L N   + +  +E  A  ++   I                E
Sbjct: 440 LKLAHMARQIEASYNW---LENMVYQCQKMNEMEAMLKLGGAIAGLKAQSTTTFEFCARE 496

Query: 415 AMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A +  GG  Y        + R YR+  A +I  GS   M+   +    +
Sbjct: 497 ASQIFGGLSYSRGGQGAKVERLYRDVRAYAIPGGSEEIMLDLSIRQALR 545


>gi|260576294|ref|ZP_05844286.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sp. SW2]
 gi|259021562|gb|EEW24866.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sp. SW2]
          Length = 555

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 135/371 (36%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 207 EIIDSLAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLATRSEIAAELILC 266

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W P + S E  PT                TE   G+D+ ++ ++  K+ D 
Sbjct: 267 GGTDAQKAQWLPGLASGEILPTAV-------------FTEPNTGSDLGSLRTRAVKVGDD 313

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN---------GLCYQR 274
                   W   +  +    +LA+ +        +   L + +P          G+    
Sbjct: 314 WQVTGNKTWITHATRTHVMTLLARTDPATSDYRGLSMFLAEKTPGTDAIPFPTQGMTGTE 373

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           ++  +G R     EL F    GF +   N+  G   +  K L+       + +A  ++  
Sbjct: 374 IE-VLGYRGMKEYELAFD---GFAVKGANLLGGVEGQGFKQLMQTFESARIQTAARAIGV 429

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D  K   
Sbjct: 430 AQNALEVGMQYAQDRKQFGKALIEFPRVAGKLAMMAVEIMVARQLTYFSAWQKDHDKRCD 489

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+ 
Sbjct: 490 LEAGMAKLL-------GARVAWACADNALQIHGGNGFALEYQISRILCDARILNIFEGAA 542

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 543 EIQAQVIARRL 553


>gi|284167414|ref|YP_003405692.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284017069|gb|ADB63019.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 386

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 144/396 (36%), Gaps = 33/396 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E VLS   +E    A+     +    P  ER +K +  P    ++ ++   GL   +   
Sbjct: 5   ESVLSDEHREFRERADEFATDVVE--PEAERIEKTDEFP--RDVIEKAGERGLLGILLPE 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +            A      A       +     +A  +A   T     ++        
Sbjct: 61  EYGGQGSDFLSYCLAVERIAQASGAVAETIQGHTFAALPIANFGTEEQKAEYLE------ 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWF-LSSPMS 240
                  PM +      + LTE   G+  + +++  +    +G Y ++G K F  ++ ++
Sbjct: 115 -------PMTRGRSIGSMLLTEPDAGSSPSELSTIAEVDETEGGYRITGEKSFGTNAGVA 167

Query: 241 DAFIMLAQVEGRVG-CFLVPRLLEDG--SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           D  +++A+          V   +  G     G  + R +  +G R + T +  F + F  
Sbjct: 168 DVHLVVARKRPAPAEGHGVSVFIAPGVDDREGFTFDRAE-FMGMRGHVTGDSTFESVFVD 226

Query: 298 LLGDLN-VSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               L  +  G    M    +       +     R S  EA+ YA  R   G  + +   
Sbjct: 227 ESALLGEIGHGFRIAMGTIDMARTGLGAIGTGIARASFDEAVEYAGGREQGGSPVGEYQA 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD+   + +A  L +  A +  +    + +++ ++ +A     +       V   
Sbjct: 287 VQVLIADMDAQLDSARHLVYDSAAAIADGNGDTRKSSKSKYVASEAAEF-------VTRN 339

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           AM+  GG+GY  +  + R+YR++   SI+ G+    
Sbjct: 340 AMQIHGGNGYRTDLPLERYYRDAKILSIIGGTTEIQ 375


>gi|19310365|gb|AAL17673.1| isobutyryl-CoA dehydrogenase [Methylobacterium extorquens]
          Length = 562

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 143/368 (38%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGITIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P I S +  PT                TE   G+D+A++ ++  K  D  
Sbjct: 274 GTEEQKQRFLPGIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKDGDH- 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + +SG+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKISGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGTDEQPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F +       L       G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEDFAVPANNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYKISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|70606813|ref|YP_255683.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68567461|gb|AAY80390.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 120/363 (33%), Gaps = 33/363 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R+   GL+                  +  +            L+         + 
Sbjct: 49  KVLKERAKELGLYGPDVPTELGGQGSDYLSLLVISEELSRVWTSFSTLLLVHWMLNRAIY 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 V K + P   S E                    TE   GTD+A I S  +K++D
Sbjct: 109 KYGKEEVKKKYLPLTASGE-------------KIGAFANTEPEAGTDVAGIRSTAKKVND 155

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             Y ++  K F+++   +D F++ A+            +   L +         R++   
Sbjct: 156 H-YIINARKIFITNGDIADYFVLTARTSPPSNNARWKGITMFLVEKEWGVKTVSRIETT- 213

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH- 337
           G +++ T E+   +         NV        K  +   D A   VS   V + ++   
Sbjct: 214 GLKASHTTEIILEDVKVPA---ENVIGEEGMGFKYAVESFDYARTIVSAQAVGIGQSAFE 270

Query: 338 ----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y+ +R      + +  ++++ +++   D+  +  L++   + +++ K+        
Sbjct: 271 KLVNYSLQRKAFDKPIAEFQIVQQKVSESFADLLTSRFLTYWAGSLYNKGKTDE-----Y 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            + A + K++  + A  ++  AM   GG G      + R  R+        G+ +   + 
Sbjct: 326 IVAASLAKFYATEAAEKIVMRAMTAHGGYGVSNSIGLERMLRDLQILKTYEGTNDIQRVS 385

Query: 454 VLN 456
              
Sbjct: 386 AAR 388


>gi|254487334|ref|ZP_05100539.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214044203|gb|EEB84841.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 552

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 137/397 (34%), Gaps = 46/397 (11%)

Query: 85  HAYGPGGERWDKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
             +       DKVE +   WH         ++      G+        F      +A   
Sbjct: 177 EQFRRYA--IDKVEPYAHEWHLKDELIPMEVINELAEMGVFGLTIPEEFGGFGLSKASMC 234

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
             +       +  G L + S  +A ++    T      W P+I S E  PT         
Sbjct: 235 VVSEELSRGYIGVGSLATRSEIAAELIIAGGTDEQKAKWLPRISSAETLPTAV------- 287

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254
                  TE   G+D+ ++ ++  K  +         W   +  +    +LA+ +     
Sbjct: 288 ------FTEPNTGSDLGSLRTRAVKDGEDYRITGNKTWITHAARTHMMTLLARTDPNTTD 341

Query: 255 CFLVPRLLEDGSPN---------GLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGD 301
              +   L + +P          G+    ++  +G R     EL F          L G+
Sbjct: 342 YKGLSMFLAEKTPGDDANPFPTDGMTGGEIE-VLGYRGMKEYELAFDGFHVKGENLLGGE 400

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + +      + +A  ++   + +L  ++ YA  R   G  LI+ P +   +A 
Sbjct: 401 EGKGFKQLMETFESARIQTAARAIGVAQSALDISMQYAIDRKQFGKSLINFPRVSSKLAM 460

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A++I  A  L++  A   DE +    EA  A+++         ++A A     ++  GG
Sbjct: 461 MAVEIMVARQLTYFSAFEKDEGRRCDVEAGMAKLL-------GARVAWAAADNGLQIHGG 513

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +G+  E  I+R   ++   +I  G+       +   +
Sbjct: 514 NGFALEYKISRVLCDARILNIFEGAAEIQAQVIARRV 550


>gi|322700751|gb|EFY92504.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 540

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 141/407 (34%), Gaps = 28/407 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L    +E     N   P +  +       +++     +  + RR    GL    +   +
Sbjct: 142 ALRAEVREWME--NEIEPNVTEWDEAKRVPEEI-----YKEMGRRGYLAGLLGVKYPTEY 194

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSRE 182
            P   K          + M   +            +++       P +      K  S+ 
Sbjct: 195 VPNGVKSVPTESWDLFHEMLLTDELSRAGSGGFVWNLIGGFGIGCPPIM-----KFGSQT 249

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD 241
                   +      + L +TE   G+D+A +T + +   DG  + ++G K ++++ +  
Sbjct: 250 LKDRIMPGILAGDKRVCLAITEPDAGSDVANLTCEAKLSEDGKHFIVNGEKKWITNGIWA 309

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +   A   G  G   V  LL +  P G+  +R+ +  G  S+ T  + F +    +   
Sbjct: 310 DYFTTAVRTGGEGMNGVSLLLIERGP-GVNTRRM-DCQGVWSSGTTYITFEDVKVPVENL 367

Query: 302 LNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           L       G +        +   I  +   RV   E++ YA +R   G  LI+ PV++  
Sbjct: 368 LGKKDKGFGVIMTNFNHERIGIIIQCLRFSRVCFEESVKYANKRRTFGKKLIEHPVIRMK 427

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAM 416
           +A +A  I A+      L N   + +   E  A  R+  PI                EA 
Sbjct: 428 LAHMARQIEASYNW---LENMIYQCQKMGEHEAMLRLGGPIAGLKAQSTVTFEFCAREAS 484

Query: 417 ECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG  Y        + R YR+  A +I  GS   M+   +    K
Sbjct: 485 QIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSMRQSLK 531


>gi|226291549|gb|EEH46977.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb18]
          Length = 547

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/392 (19%), Positives = 141/392 (35%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + WD+    P   +  +  R    GL    ++ +      K     +    +     
Sbjct: 163 PYVQEWDEARAIPEDLYKQMGERGYLAGLMGVAYNPALSKNKVKSVPPEKWDFFHEFIVT 222

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P V K    ++  R         +      I L +TE
Sbjct: 223 DELSRAASGGLVWNLIGGFGIGCPPVMKYGKKELIDR-----IVPGILAGEKRICLAITE 277

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 278 PDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMNGISVLLI 337

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +  
Sbjct: 338 ERSAGGVKTRKM-DCQGMSTSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERIGI 396

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 397 IIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 456

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            +  D   +     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 457 QSMDDTEAAFRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYTRGGQGGKIERL 511

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    K    F
Sbjct: 512 YRDVRAYAIPGGSEEIMLDLSMRQSLKVHQFF 543


>gi|284030943|ref|YP_003380874.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283810236|gb|ADB32075.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 387

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 113/357 (31%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     GL            +   A+ +    +          +      +   + 
Sbjct: 49  RDLAKELGALGLLGMHLTGYGCAGLGPVAYGLACLEIEAADSGMRSLVSVQGSLAMYALW 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +     +W P++ + E                  GLTE   G++   + +  ++  D
Sbjct: 109 KYGSEEQKTEWLPRMAAGE-------------AIGCFGLTEPDFGSNPGGMRTNARRDGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  V  F VP         G     +  K+  R+
Sbjct: 156 DWILNGSKMWITNGSVADVAVVWARTDEGVRGFAVPT-----DTPGFSAPEITRKLSLRA 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL F +        L  + G    +  L          ++   R  L  A+ YA +
Sbjct: 211 SVTSELIFDDVRLPSSALLPQARGLSGPLGCLNEARFGIVFGAMGAARDCLETAVTYAAQ 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  +AD+A+++     L+  L    ++   R E+         + K
Sbjct: 271 RQVFDKPLSAYQLTQAKLADMAVELNKGILLAVHLGRLKEKGTLRPEQ-------VSVGK 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  E    +  +G   E  + RH     +     G+     L +   L
Sbjct: 324 LNNVREAIAIARECRTILAANGISGEYPVMRHANNLESVLTYEGTSEVHQLVIGQAL 380


>gi|86134545|ref|ZP_01053127.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
 gi|85821408|gb|EAQ42555.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152]
          Length = 604

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/482 (14%), Positives = 172/482 (35%), Gaps = 66/482 (13%)

Query: 43  LVALIAN--FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWDKVE 98
           L  L++   F     + L L  + V   + +E+        P        P   +   V 
Sbjct: 21  LEDLLSRERFQEHDMESLNLFIDSVKDFSDREMY-------PYFQEMDANPAYHKDGTVI 73

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            H     ++ +S   G+  + +D     +    +    A  +   A        S ++ +
Sbjct: 74  VHEQVQEVMHQSGEMGIISACFDYDDGGLQMPISAFQAAVYIMDAANNHLPGYPSLTLGA 133

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A ++    +  +   + P + +  +  T             + LTE + G+ ++ + ++ 
Sbjct: 134 AELIIEFGSQVLKDKYVPNMLAGVWGGT-------------MCLTEPQAGSSLSDVVTKA 180

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLEDGSP----- 267
              +DG Y ++G K F+S    +       ++LA++EG   G   +   +   +      
Sbjct: 181 TPTNDGYYKITGQKIFISGGDYNGAENIVHLVLARIEGAPKGTKGISLFVVPKNRLKEDG 240

Query: 268 ----NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
               N +       K+G +   T  L F    +  G+L+G  +     +  M     +  
Sbjct: 241 TLEYNDVMTVADFQKMGQKGYCTTHLGFGDSDDCRGWLVGQEHKGLAQMFLMMNGARIAV 300

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGI--------------LIDQPVMKRAIADIALDI 366
              + +    +   ++ YA  R     +              +I+ P ++R +      +
Sbjct: 301 GRGAAAIAMAAYRTSLQYANERPQGRKLSADGKKNPTEKQSLIIEHPDVRRMLLLQKSIV 360

Query: 367 AAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
             + +L    +   D        + + +      ++ PI K +  +     +   ++ +G
Sbjct: 361 EGSLSLVLLASKYQDILTTATSKEEKEKYHLLLEMIIPIVKTYPSEAGAESVDNGLQVLG 420

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLEQDLG 477
           G G+  + ++ ++YR+   +++  G+      D+L     ++ G  L E L + + + + 
Sbjct: 421 GYGFCTDFTLQQYYRDIRISALYEGTTGIQSQDLLGRKVPMQNGKGL-ELLSAEIVKTII 479

Query: 478 SS 479
           ++
Sbjct: 480 AA 481


>gi|255940624|ref|XP_002561081.1| Pc16g07560 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585704|emb|CAP93426.1| Pc16g07560 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 542

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 136/381 (35%), Gaps = 22/381 (5%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  PA  +  +  R    GL    +     P   K     R    + M   
Sbjct: 158 PYVTEWDEAKEVPAHIYKQMGERGYLAGLLGVHFPEKHTPHRVKSVSPDRWDLFHEMLLT 217

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +            S++       P + K     +  R         +      I L +TE
Sbjct: 218 DELSRAGSGGLVWSLIGGYGIGCPPLVKFGKKPLVDR-----ILPGILAGDKRICLAITE 272

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A +  + +   DG  Y ++G K ++++ +   +   A   G+ G   +  LL 
Sbjct: 273 PDAGSDVANLGCEAKLTEDGKHYIVNGEKKWITNGIYSDYFTTAVRTGKDGMNGLSVLLI 332

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           +    G+  +R+ +  G  S+ T  + F +       L+G  N     +        +  
Sbjct: 333 EREAGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKENQGFKVIMTNFNHERIGI 391

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A       L N  
Sbjct: 392 VIQCVRFSRVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAHMARQIEATYNW---LENII 448

Query: 381 DEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            + +S  +  A  ++   I        +       EA +  GG  Y        I R YR
Sbjct: 449 FQCQSMEDTEAMLKLGGAIAGLKAQSTQCFEFCAREASQIFGGLSYSRGGQGGKIERLYR 508

Query: 436 ESPANSILLGSGNAMVLDVLN 456
           +  A +I  GS   M+   + 
Sbjct: 509 DVRAYAIPGGSEEIMLDLSMR 529


>gi|218458995|ref|ZP_03499086.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Kim 5]
          Length = 233

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 126/233 (54%), Positives = 161/233 (69%), Gaps = 1/233 (0%)

Query: 12  MNQVHQPSDSLFALNQPPLFI-GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
           M   ++  D L  LN     +       SD L+V L A  P  + ++LE +G YV S  A
Sbjct: 1   MTSANRTDDKLAELNPAEPVVRASTPTRSDPLIVDLTAALPRGIREDLENMGRYVTSPEA 60

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QELARMAN   PQL  +GP GER D VEFHPAWHAL+RRS+  GLH S+WD   +   + 
Sbjct: 61  QELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKD 120

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           +AHK+RAAR YL AQLE+GHL   ++TSAS+ AL  +P V KDWAPKI SR+YD +N+  
Sbjct: 121 EAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPA 180

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
           MQK++V IG+G+TEK+GGTD+ A  S  +K+S+GIY LSGHKWF+S+PMSDAF
Sbjct: 181 MQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAF 233


>gi|88856935|ref|ZP_01131586.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1]
 gi|88813811|gb|EAR23682.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1]
          Length = 381

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 132/373 (35%), Gaps = 29/373 (7%)

Query: 93  RWDKVE---FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           R D+ E     P    L R +  +G   S +     PV         AA + L  +    
Sbjct: 29  RVDEAESAEHFPT--ELFRLAGANGFIGSHY-----PVDVGGGGGGIAAAMVLREEFSYS 81

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S        L     V   +  +  S E       P       I + +TE   G+
Sbjct: 82  SVGISS-------GLGHQDHVGTAYLHRFGSPEQIDRWLRPALAGEFVIAMAVTEPDAGS 134

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+  + S+ ++  +         +  + P++D   ++ ++      F V   +      G
Sbjct: 135 DVRRMRSKARREGNEWVITGRKTFITNGPLADGIAIVVRLADTTDRFGV--FVVLRGDPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSV 325
              +R   K+G  S+   EL F +        L+   G     V D+ +   +  A  ++
Sbjct: 193 YQCERTLGKMGCNSSEVGELVFDDVRVGPDRMLSPEGGSSLEDVLDVLVRGRVLVAASAL 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +    + YA++R   G  +     +    AD +  I AA  +++  A   +   +
Sbjct: 253 GLARRAFDVGMEYAKQREAFGRPIGRFQEISMKFADASTAIRAAHLITYDTAALLERDST 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                    +     K +  + A  V+ + M   GG+G+++   I R YR++   +I+ G
Sbjct: 313 VP------VLECSQAKLFASETAVMVVDQMMRVFGGAGFMQSSVIERLYRDARFFTIVEG 366

Query: 446 SGNAMVLDVLNLL 458
           +       + + L
Sbjct: 367 TVEIQHRIISSHL 379


>gi|159899987|ref|YP_001546234.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893026|gb|ABX06106.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 395

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 137/423 (32%), Gaps = 43/423 (10%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
           ++D  L     +    +  E   + + V     +E+  + N               W+K 
Sbjct: 7   TADPALDFYQFDLL--LTPEEREVRDRVRGFMQREVKPIINEY-------------WEKG 51

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           EF      L+ +     +          P +   A  + AA +  +           S  
Sbjct: 52  EFP---FELIPKLAELKVCGGTIQGYGCPGLSSVATGLVAAEMAKIDGSVCTFFGVTSGL 108

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           + S +    +    + W PK+ S E                   LTE   G+D + I + 
Sbjct: 109 AMSSIYYCGSEAQKEYWLPKLASME-------------KIGAFALTEPDNGSDASHIQTT 155

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +   D        +W  ++  +D  I+ A+ E       V   L +    G     +  
Sbjct: 156 ARLEGDHYVLNGQKRWIGNASFADVIIVWARDEA---TNQVTGFLVEKGTPGFEATVMHG 212

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           KI  R+    E++  N        L  +    +   +L       A   V   + +   A
Sbjct: 213 KIAKRALWNAEIKLENCRIPASNRLEKARSFKDTAVVLANTRFGVAWEGVGHAQAAYEMA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  +    +++  +  +  ++ A    ++RL+   D+             
Sbjct: 273 LRYSQERKQFGKPIAGYQLIQEKLVKMLAEVVAMELTTWRLSVLRDQGL-------MTDG 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            + + K      A  ++A   E  GG+G + E  IARH+ +  A     GS     L V 
Sbjct: 326 QSSLAKMNNSAKARQIVALGREIFGGNGLLLENHIARHFADMEAVYTYEGSNEINTLVVG 385

Query: 456 NLL 458
             +
Sbjct: 386 REI 388


>gi|149200800|ref|ZP_01877775.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. TM1035]
 gi|149145133|gb|EDM33159.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. TM1035]
          Length = 565

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 150/402 (37%), Gaps = 47/402 (11%)

Query: 83  QLHAYGPGGER--WDKVEFHP-AWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           +L        R   +KVE H   WH         ++      G+        F      +
Sbjct: 183 ELEMIRAQFRRFSVEKVEPHAHEWHLKDELIPMEIIEELAEMGVFGLTIPEEFGGFGLSK 242

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A  +  +       +  G L + S  +A ++    T      W PK+ S E  PT     
Sbjct: 243 ASMVVVSEELSRGYIGVGSLGTRSEIAAELILCGGTEEQKAQWLPKLASAEILPTAV--- 299

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE 250
                      TE   G+D+ ++ ++  K  +G + ++G+K +++ +  +    +LA+  
Sbjct: 300 ----------FTEPNTGSDLGSLRTRAVKDENGDWKVTGNKTWITHAARTHVMTLLARTV 349

Query: 251 GRVG-CFLVPRLLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG---- 296
                   +   L + +P          G+    ++  +G R     EL F N       
Sbjct: 350 PDTTDHRGLSMFLAEKTPGTDEAPFPTPGMTGGEIE-VLGYRGMKEYELGFDNFHVKGEN 408

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L G+       + +      + +A  +V   + +L  A+ YA+ R   G  LI+ P + 
Sbjct: 409 LLGGEEGKGFKQLMETFESARIQTAARAVGVAQSALDVAMKYAQDRKQFGRALIEFPRVS 468

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A +A++I  A  L++  A   D  +    EA  A+++         ++A A     +
Sbjct: 469 GKLAMMAVEIMVARQLTYFSAWEKDHGRRCDLEAGMAKLL-------GARVAWAAADNGL 521

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG+G+  E +I+R   ++   +I  G+       +   L
Sbjct: 522 QIHGGNGFALEYTISRILCDARILNIFEGAAEIQAQVIARRL 563


>gi|254455203|ref|ZP_05068638.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
 gi|198263613|gb|EDY87885.1| glutaryl-CoA dehydrogenase [Octadecabacter antarcticus 238]
          Length = 410

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 140/413 (33%), Gaps = 49/413 (11%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           GE +++ +A+  A+       +L         +      P   A +      GL  +   
Sbjct: 37  GERMIADSARAYAQD------KLLPRATDA--YLNEHVTPEIFAEMG---EMGLLGTTIP 85

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFS 180
             +  +          AR           +MS  S      +    T    + + P +  
Sbjct: 86  EEYGGLGAGYVSYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGTEEQRQKYLPGL-- 143

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                         ++    GLTE   G+D A + +  +K+  G        W  +SP++
Sbjct: 144 -----------AAGTLIGCFGLTEPEAGSDPAGMKTTAKKVDGGYVLNGAKMWISNSPIA 192

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
           D F++ A+ E   G   +   + +    GL   ++  K+  R++ T E+   N       
Sbjct: 193 DVFVIWAKSEAHGGK--IRGFVLEKGMKGLSAPKIGGKLSLRASVTGEIVMENVEVSDDA 250

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQ 352
           LL  +    GP         L+ A   ++   +  AE   +  R     R   G  L   
Sbjct: 251 LLPGVEGLKGP------FGCLNRARFGIAWGVMGAAEDCWHRARDYGLNRVQFGKPLAQT 304

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + ++ +AD+  +I+     + R     ++     E       +  + K   C  A  + 
Sbjct: 305 QLFQKKLADMQTEISLGLQGALRTGRMLEDGTCGPE-------LISLIKRNNCGKALDIA 357

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             A +  GG+G + E  + RH +     +   G+ +   L +L   + G   F
Sbjct: 358 RHARDMHGGNGIMAEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQTGLQAF 409


>gi|324505490|gb|ADY42358.1| Glutaryl-CoA dehydrogenase [Ascaris suum]
          Length = 418

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 131/365 (35%), Gaps = 27/365 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           LL      GL  + ++           + + A  +  +       +   +      +   
Sbjct: 77  LLPELGKMGLLGAPYEGYGCAGTTFVGYGLLAREVEAIDSGYRSTVSVQTSLVIGPIYNY 136

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            +    K + P + + E             +    GLTE   G++ A + ++ +   +  
Sbjct: 137 GSEAQKKKYIPGLAAGE-------------LIGCFGLTEPNHGSNPAGMETKARWDGNAK 183

Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            Y LSG K W  +SP++D  I+ A+ +       +   + +   +GL   +++ K+  R+
Sbjct: 184 VYKLSGTKSWISNSPVADVMIVWARSD--RHDNEIMGFILERGMSGLTTPKIEGKLSLRT 241

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T ++            L    G V     L    L  A  ++   R     A  YA  
Sbjct: 242 SVTGQIAMDEVPVPEENLLPNVKGIVGPFGCLNNARLSIAWGALGAARTCFEIARDYALE 301

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    +++  +AD+  +I+       R+    D       E + +     + K
Sbjct: 302 RPQFGRPLAKNQLIQVKLADMLTEISIGLHACLRVTRLKD-------EKSCSPQQISLIK 354

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              C  A  +  +A + +GG+G ++E  + RH     + +   G+ +   L +L     G
Sbjct: 355 RNSCGKALEIARKARDILGGNGIVDEYHVMRHMCNLESVNTYEGTHDIHAL-ILGQQITG 413

Query: 462 TNLFE 466
              F+
Sbjct: 414 LQAFK 418


>gi|84515167|ref|ZP_01002530.1| isobutyryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84511326|gb|EAQ07780.1| isobutyryl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 561

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 131/367 (35%), Gaps = 35/367 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++      G+        +      +A     +       +  G L + +  +A ++   
Sbjct: 214 IIDEMAEMGVFGLTIPEEYGGFGLSKASMCVVSEELSRGYIGVGSLATRTEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + W P + S E  PT                TE   G+D+ ++ ++  K  D  
Sbjct: 274 GTEEQKQHWLPGLASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKKGDDW 320

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP---------NGLCYQRL 275
                  W   +  +    +LA+ +     +  +   L + +P          G+    +
Sbjct: 321 EITGNKTWITHATRTHVMTLLARTDPTTTDYSGLSMFLAEKTPGTDENPFPTPGMTGGEI 380

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVS 331
           +  +G R     EL F          L      G  + M+      + +A  +V   + +
Sbjct: 381 E-VLGYRGMKEYELAFDGFMVKGDNLLGGDTGKGFKQLMQTFESARIQTAARAVGVAQSA 439

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L   + YA+ R   G  LID P +   +A +A++I  A  L++  A+  D  +    EA 
Sbjct: 440 LDVGMQYAQDRKQFGAALIDFPRVAGKLAMMAVEITIARQLTYFSAHEKDNDRRCDLEAG 499

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+++         ++A A    A++  GG+G+  E  I+R   ++   +I  G+     
Sbjct: 500 MAKLL-------GARVAWACADNALQIHGGNGFALEYKISRILCDARILNIFEGAAEIQA 552

Query: 452 LDVLNLL 458
             +   +
Sbjct: 553 QVIARRV 559


>gi|325087848|gb|EGC41158.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 526

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/428 (18%), Positives = 147/428 (34%), Gaps = 29/428 (6%)

Query: 51  PSVVHK--ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHAL 106
           P+ +    +L   G+       +E    A                WD+ +  P   +  +
Sbjct: 111 PTALEPYGDLVPFGDPAWYQGVREWVE-AEIEPYV--------HEWDEAKIVPEHLYKQM 161

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
             R    GL    +D +      K          + +   +     +      +++    
Sbjct: 162 GERGYLAGLMGVAYDPALSRNHVKCVPPESWDFFHELIVTDELSRAASGGLVWNLIGGFG 221

Query: 167 --TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P V K    ++ +R         +      I L +TE   G+D++ I+ + +   DG
Sbjct: 222 IGCPPVIKYGKKELVNR-----ILPGILAGDKRICLAITEPDCGSDVSNISCEAKLTPDG 276

Query: 225 I-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
             Y ++G K ++++ +   +   A   G  G   +  LL + S  G+  +++ +  G  +
Sbjct: 277 KHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMNGISVLLIERSAGGVGTRKM-DCQGMAT 335

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  + F +       L+G  N     +        +   I  V   RV   E++ YA 
Sbjct: 336 SGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERMGIIIQCVRFSRVCYEESVKYAH 395

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  LID PV++  +A +A  I A+      L     ++   +E A          
Sbjct: 396 KRQTFGKRLIDHPVIRMKLAHMARQIEASHNWLENLVFQC-QSMDDTEAAFRLGGAIAGL 454

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           K            EA +  GG  Y        I R YR+  A +I  GS   M+   +  
Sbjct: 455 KAQSTTTFEFCAREASQIFGGLSYTRGGQGGKIERLYRDVRAYAIPGGSEEIMLDLSMRQ 514

Query: 458 LEKGTNLF 465
             K    F
Sbjct: 515 SLKVHQFF 522


>gi|301632496|ref|XP_002945321.1| PREDICTED: probable acyl coa dehydrogenase 6-like [Xenopus
           (Silurana) tropicalis]
          Length = 551

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/328 (18%), Positives = 120/328 (36%), Gaps = 21/328 (6%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +   AQ   G        + ++   M TP +         S E       P       +
Sbjct: 230 EMEAAAQAIGGISSGGVGMAIAVQTDMATPAL-----THFGSDELRERFLKPTVAGDQVV 284

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGR----V 253
            LG++E   G+D+A++ +  +K  D         W  +   +D   +LA   EG      
Sbjct: 285 CLGVSESGAGSDVASLKTTARKDGDDYVIDGSKMWITNGTQADWMCLLANTSEGDVHRNK 344

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM 312
               +P         G+  Q++K K+G  ++ T ++ F          +     G    M
Sbjct: 345 SLICLPLRESGKLRPGISMQKIK-KVGMWASDTAQVFFDEVRVPQRYRIGEEGKGFTYQM 403

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           +      L  A   V+ +   + E I Y R+R   G  ++D  V+   +A++  ++    
Sbjct: 404 RQFQEERLSGATRRVTALSHVIDETIAYTRQRKAFGRSILDNQVVHFRLAELKTEVEMLR 463

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           +L +R A         +E       +A + K    ++   V    ++  GG G+  E  +
Sbjct: 464 SLIYRAAQVHMGGGDMTE-------LASMAKLKAGRLCREVTDSCLQYWGGMGFTWENKV 516

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           +R +R+    SI  G+   M+  +   +
Sbjct: 517 SRAWRDLRLISIGGGADEIMLTIICKHM 544


>gi|300869408|ref|ZP_07113994.1| Prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|237880749|gb|ACR33074.1| prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
 gi|300332588|emb|CBN59192.1| Prolyl-ACP dehydrogenase [Oscillatoria sp. PCC 6506]
          Length = 381

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 128/374 (34%), Gaps = 32/374 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ--LEAG 149
              +++    AW          G+H       +            A +            
Sbjct: 31  NDKEEIFNRDAWQKCS----EFGVHGWPIPARYGGQELDILTTAYALQGLGYGCKDNGLI 86

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             M+  + +  M  L   T    + + P +              +         TE + G
Sbjct: 87  FAMNAHIWACEMPLLTFGTEEQKEKYLPLLC-------------RGGWIASHAATEPQAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +DI ++ +  QK  D  Y L+G+K ++++  ++D FI+ A ++  +G   +   + +   
Sbjct: 134 SDIYSLKTTAQKDGD-KYILNGYKHYVTNGTIADLFIIFATIDPSLGKEGLTTFMIEKDT 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   +  +K+G R+    EL   N        LG+                      +
Sbjct: 193 PGLILSKPISKMGMRTAEVPELRLENCEVSAANRLGEEGTGLAIFNHSMEWERGFILAAA 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  M   L ++I YAR     G  +    ++   + ++ L +  A A  +++A   +  +
Sbjct: 253 VGTMERLLEQSIRYARSHKQFGQAIGKFQLVANKLVEMKLRLENAKAYLYKVAWMKENKQ 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A + A +   +  +       EA+E  G  GY+    + R  R++ A+    
Sbjct: 313 -------MALLEASMANLYISEAWVQSCLEAIEIHGAYGYLTNTELERELRDAIASKFYS 365

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 366 GTSEIQRVVIAKFL 379


>gi|218530458|ref|YP_002421274.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|218522761|gb|ACK83346.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 562

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 144/368 (39%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGLTIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P I S +  PT                TE   G+D+A++ ++  K  D +
Sbjct: 274 GTEEQKQRFLPGIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKDGD-L 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + +SG+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKISGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGTDEEPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F +       L       G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEDFAVPANNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYKISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|15789629|ref|NP_279453.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10579989|gb|AAG18933.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 456

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 137/420 (32%), Gaps = 31/420 (7%)

Query: 44  VALIANFPSVVHK---ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
                 +P+ V     ++ELL + V+   A+ + + A     +     P  E +     +
Sbjct: 56  QGFYRTYPAAVQPRRMDVELLSDDVVPEHARAVKQDARAFAAE--HIAPHAEEYYASGEY 113

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    +L  ++  GL        +          +  A  +  A       +  +   A 
Sbjct: 114 P--WEVLEAAMDAGLVAQDIGEDYGGRGLDLTQMLAIAEEFFRADAGIALTLQLASFGAE 171

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           +V    TP                     P+       GL ++E   G+++A + +  ++
Sbjct: 172 LVEEYGTPAQKDRLL-------------TPVANNDQLTGLAVSEPEVGSNLAGMQTTAER 218

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D         W  +   +D   + A+  +                 +G   + +  K+
Sbjct: 219 DGDEYVLNGEKYWIGNGVEADWVTVYAKTGDTDDRYMNYSLFAVPTDTDGYEAEHIPEKM 278

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R++    +   +       L+G        + D      +  A   +     +  EA 
Sbjct: 279 GMRASKQAHIVLDDCRVPEANLIGTEGGGFMMLTDFFNHGRVVVAGHGLGLAAAAFEEAW 338

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +   R   G  + D   ++ ++AD+ ++  +A AL++R A            AA A+  
Sbjct: 339 DFVHDRAGFGRTVSDFQSVQHSLADMRIEFESARALAYRAAEKVAAHDEPGLWAAMAKTK 398

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A A   + M+  GG     +R IAR YR+     I  G+       V  
Sbjct: 399 A-------TEVATANAEQGMQFHGGRSNFTDRRIARVYRDVRIPVIYEGANEIQRNLVYR 451


>gi|254504546|ref|ZP_05116697.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222440617|gb|EEE47296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 389

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 131/380 (34%), Gaps = 33/380 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L  +   G + D  +   A   L++     G           P+  +     R   +  
Sbjct: 22  ELEDF-AKGLQVDHSDTDQACRLLVKAMGAAGWLQPTASEDGAPLDVRTLCLSR--EILA 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                A   ++        ++L  T      W PK  S E                   L
Sbjct: 79  RHDGLADFALAMQGLGTGALSLFGTAEQKAVWLPKTRSGE-------------AISAFAL 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE + G+D+A  T       D         W  +  ++D + + A+     G   +   +
Sbjct: 126 TEPQSGSDVANSTMTATDDGDSYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFV 185

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------ 316
                 G       + I     AT  L F++     +   ++   P +  KI +      
Sbjct: 186 VTPDRQGFEITERLDTIAPHPLAT--LRFTDCR---IKKSDLIGNPGDGFKIAMSVLDIF 240

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++   R +L EA+     R + G  L D  +++  IAD+ALD+ AA  L +R 
Sbjct: 241 RSTVAAAALGFARRALDEALERVSTRQIQGAPLADLQMVQGHIADMALDVDAAALLIYRA 300

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D    R          A + K +  + A  VI +A++  GG G     ++ + YRE
Sbjct: 301 AWAKDSGAPR------VTREAAMAKLFATEQAQQVIDKAVQLHGGDGVRSGETVEKLYRE 354

Query: 437 SPANSILLGSGNAMVLDVLN 456
             A  I  G+ +   + +  
Sbjct: 355 IRALRIYEGATDVQKIVIAR 374


>gi|254503882|ref|ZP_05116033.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222439953|gb|EEE46632.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 557

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 134/362 (37%), Gaps = 37/362 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +  +   +      +     A +  G L + S  +A ++    T    
Sbjct: 211 ELGVFGLTIPEEYGGLGLGKEAMCVVSEELSRAYIGVGSLGTRSEIAAELILCGGTQEQK 270

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PKI S E  PT                TE   G+D+A++ ++  K  D  + +SG+
Sbjct: 271 EHWLPKIASGEILPTAV-------------FTEPNTGSDLASLKTRAVKDGD-TWKISGN 316

Query: 232 KWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPN---------GLCYQRLKNKIG 280
           K +++ P+ +D   +LA+      G   +   + +             G+    ++  +G
Sbjct: 317 KTWITHPVRADIMTLLARTNPAEPGYKGLSMFIAEKPRGTDEHPFPADGMTGGEIE-VLG 375

Query: 281 NRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     E+ F +        L          +        + +A  ++   + +L   +
Sbjct: 376 YRGMKEYEIAFDDFEVKSENLLGQVEGEGFKQLMQTFEGARIQTAARAIGVAQSALDIGL 435

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G +LI  P +   +A +A +   A  L++  A   D  K    EA  A+++
Sbjct: 436 RYAEDRVQFGKVLISFPRVSDKLALMATETMIARQLTYFSAWQKDSGKRCDLEAGMAKLL 495

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A A    A++  GG+G+  E +I+R   ++   +I  G+       +  
Sbjct: 496 -------GARVAWAAADNALQIHGGNGFALEYAISRVLCDARILNIFEGAAEIQAQVIAR 548

Query: 457 LL 458
            L
Sbjct: 549 RL 550


>gi|41053742|ref|NP_957180.1| glutaryl-Coenzyme A dehydrogenase [Danio rerio]
 gi|39794610|gb|AAH63972.1| Glutaryl-Coenzyme A dehydrogenase [Danio rerio]
          Length = 441

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 130/383 (33%), Gaps = 39/383 (10%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L        R     FH     +L      G+                A+ + A  +  
Sbjct: 81  KLMPRIIMANR--NEHFH---REILNEMGELGVLGPTIQGYGCAGTSYVAYGLIAREVER 135

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           +       +   S      +    T    + + PK+   E             +    GL
Sbjct: 136 VDSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPKLARGE-------------ILGCFGL 182

Query: 203 TEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           TE   G+D A + ++ +       Y +SG K W  +SP +D  ++ A+ E       V  
Sbjct: 183 TEPNHGSDPAGMETKAKYNPSSRTYSISGTKTWITNSPYADICVVWAKCEDGK----VRG 238

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
            + +    GL   +++ K   R++AT  +           + N+             L++
Sbjct: 239 FVLERGMKGLSTPKIEGKFSLRASATGMIVMDEVEVP---EENLLPHVSGLAGPFGCLNN 295

Query: 321 AIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           A   ++   +  AE   +A R     R   G  L    ++++ +AD+  +I        +
Sbjct: 296 ARFGIAWGALGAAEFCFHAARQYTMDRIQFGVPLARNQLIQKKMADMLTEITIGLQSCLQ 355

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           L    D+ K   E       M  + K   C  A  +  +A + +GG+G  +E  I RH  
Sbjct: 356 LGRLIDQKKHTPE-------MISLLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVM 408

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
              A +   G+ +   L +   +
Sbjct: 409 NLEAVNTYEGTHDIHALILGRAI 431


>gi|207722669|ref|YP_002253105.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206587851|emb|CAQ18433.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 403

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 119/316 (37%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++L  TP   + +  ++   E                   L+E   
Sbjct: 91  ADFAFAMQGLGSGAISLQGTPAQRERYLTQVARGE-------------AIAAFALSEPDA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    +   DG        W  +  ++D +++ A+     G   +   + +   
Sbjct: 138 GSDVAALACAARVDGDGYVLDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVEAGT 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G       + I         L F+         +     G    M+ L       A  +
Sbjct: 198 PGFEIAERIDVIAPH--PLARLRFTGCRIPAAQRVGAAGEGFKVAMRTLDVFRTSVAAAA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+  A  R +  G+L D  + +  +A +A  I +A  L++R A   D+ +
Sbjct: 256 LGFARRALDEALARATTRKMFNGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGR 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A++ A        + A  VI  A++  GG G + E+ + R YRE  A  I  
Sbjct: 316 SVTREAAMAKMTA-------TENAQQVIDAAVQMWGGLGVVSEQPVERLYREIRALRIYE 368

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L +
Sbjct: 369 GATEVQQLIIARDLLR 384


>gi|327310836|ref|YP_004337733.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326947315|gb|AEA12421.1| Acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 383

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 135/393 (34%), Gaps = 39/393 (9%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             A      L        R D+ E+      LLR     GL      + +          
Sbjct: 20  EFAERRVAPL------ARRIDEGEYP---RELLREMGELGLLAPHIPQEYGGAGLDFRSM 70

Query: 135 IRAARLYLMAQLEAGHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
           + A      A      +M       A  +    + +  + W                  K
Sbjct: 71  VVAVEEIAKASPALATVMEVQGSMIAWNLYHYASEQAREKWLED-------------AAK 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGR 252
               I   L+E   G+D AAI ++ +K            W  S   +DA+++ A+     
Sbjct: 118 GRKIIAFALSEPCCGSDAAAIQTRAEKRGGEWAINGVKLWITSGLYADAYLVAARTGPPE 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +    +   L + SP  +    +K  +G     T E++ ++        +       +  
Sbjct: 178 LRHKSISLFLVERSPC-VEVSPVK-VMGVHGTGTAEVKLNDCRVGDEALVGRLNEGFQ-- 233

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHY-----ARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +L  L++    V  + + +AEA         ++R   G  + D  +++  +A+I     
Sbjct: 234 VVLDDLNNGRTCVGAIGLGIAEAAFAEAYAYTKKRTAFGKPIADFQIVQHYLANIHAQTE 293

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   + +  A   D     +++ A+  + A + K    ++A      AM+ +GG GY  +
Sbjct: 294 AVKHVVYTAALYRD-----TKDPAF-PMYAQLAKVLASRLAVDATRTAMQVMGGFGYSTD 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +   YR++ A  I  G+   ++  +   LEK
Sbjct: 348 SKVEMLYRDAKATEIYEGANEVIMNTIYRFLEK 380


>gi|309812945|ref|ZP_07706673.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp.
           Ellin185]
 gi|308433017|gb|EFP56921.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp.
           Ellin185]
          Length = 615

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/492 (17%), Positives = 173/492 (35%), Gaps = 76/492 (15%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+   S         ++ N P    Y P       V    ++    +  I  G       
Sbjct: 51  GDLAASLI------DSDRNPPV---YDP---ETKSVTMPESFKKSYKSYIDAGWGMLDAP 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
              + +    + +   A L   A   A H+ S S   AS++  M      K  A  I   
Sbjct: 99  VELDGMKVPPSVRWSLAELVCGA-NPAVHMFSASYAFASLLYFMGNDEQKK-LAKHIVDG 156

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
            +                + LTE   G+D+ A  ++  +  DG + ++G K F++S  SD
Sbjct: 157 GWH-------------CTMVLTEPDAGSDVGAGRTKATQNDDGTWNITGVKRFITSAESD 203

Query: 242 -----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                   +LA+ EG       +  F+VP+   D      G  NG     +++K+G + +
Sbjct: 204 MVDNVVHFVLARPEGAGPGTKGLSLFIVPKFHVDLETGELGERNGAYVTNVEDKMGLKVS 263

Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F +     G LLGD++     +  +     +     +++ +      A+ YA+ 
Sbjct: 264 TTCEVTFGDGAPAVGTLLGDVHDGIAQMFKVIENARMFVGTKAIATLSTGYLNALEYAKE 323

Query: 342 RHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--------- 381
           R                 +   P ++R++           +L    A   D         
Sbjct: 324 RVQGADMTTPQKDAPRVTITHHPDVRRSLMLQKAYAEGLRSLVMYTACQQDVVDQATKGN 383

Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHY 434
                 E       A    ++ PI K    + A  ++  E+++  GGSG+++E  + ++ 
Sbjct: 384 PAAELEEGSPAEMAARLNDLLLPIVKGVGSERAWVLLGTESLQTYGGSGFLKEYPLEQYV 443

Query: 435 RESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
           R++  +++  G+     LD     +++        L   +E  +G + + +         
Sbjct: 444 RDAKIDTLYEGTTAIQGLDFFFRKIVKDQGVALGMLQKEIETTIGQAPEALKREAGLLAQ 503

Query: 493 LCKEDKGLARFL 504
              + K +  F+
Sbjct: 504 AATDLKDMGEFM 515


>gi|154252065|ref|YP_001412889.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156015|gb|ABS63232.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 568

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 130/369 (35%), Gaps = 34/369 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           ++    G+        F  +   +      +       +  G L + S  +A ++    T
Sbjct: 221 KQMAELGVFGLTIPEEFGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGT 280

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 W PKI S E  PT                TE   G+D+A++ ++G++  D    
Sbjct: 281 KEQKDKWLPKIASGEVLPTAV-------------FTEPNTGSDLASLKTRGKRDGDVYKV 327

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP---------NGLCYQRLKNK 278
                W   +  +D   +L +     G   +  LL +             G+    ++  
Sbjct: 328 NGNKTWITHAARADVMTLLCRTNDEPGYKGLSMLLAEKPRGGDEEPFPAKGMSGGEIE-V 386

Query: 279 IGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +G R     E+ F +        L G+       +        + +A  +V   + +L  
Sbjct: 387 LGYRGMKEFEIGFDDFEVKAENLLGGEEGQGFKQLMQTFESARIQTAARAVGVAQSALEL 446

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + YA+ R   G  + D P +   +  +A++I  A  L++  A   D  +    EA  A+
Sbjct: 447 GLRYAQDRIQFGKPIYDFPRVNGKLVMMAVEIMVARQLTYFAAREKDGGRRCDLEAGMAK 506

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++A            A    A++  GG+G+  E  ++R   ++   +I  G+       +
Sbjct: 507 LLAARIA-------WAAADNALQIHGGNGFALEYPVSRVLCDARILNIFEGAAEIQAQVI 559

Query: 455 LNLLEKGTN 463
              L +G N
Sbjct: 560 ARRLLEGGN 568


>gi|311104503|ref|YP_003977356.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310759192|gb|ADP14641.1| acyl-CoA dehydrogenase, middle domain protein 4 [Achromobacter
           xylosoxidans A8]
          Length = 413

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 138/413 (33%), Gaps = 25/413 (6%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           ++L R A+     L A         + E       L+      GL        F+   R 
Sbjct: 17  RDLLRQAD---AWLEARPAWTAPQSRAEMDEQCRRLVAGMGQAGLLAHAVPDPFDASARI 73

Query: 131 QAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
               +   R              +     ++ +AL  TP   + +              A
Sbjct: 74  DTRAVCLLRDRLAQHGALFDFAFAMQGLGSAAIALDGTPAQRQRYL-------------A 120

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P +         L+E + G+D+ A++   ++  D         W  +  ++D +++ A+ 
Sbjct: 121 PARAGRRIAAFALSEAQAGSDVGALSCAARQDGDAYVLDGEKTWISNGGIADHYVVFARD 180

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGP 308
               G   +   + D    GL      + +     AT++        G  LG+       
Sbjct: 181 PRSAGAKGISAFIVDADTPGLEIAERIDVLSPHPLATLKFTACRVAGGQSLGEPGQGFKL 240

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
                 +        ++   R +L EA  +A +R + G  L D  + +  ++ +A    A
Sbjct: 241 AMRTLDIFRTSVGAAALGFSRRALQEATQHALQREMFGKTLADFQLTQARLSQMATQTDA 300

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  L +R A + D  +  S +AA A++ A        + A  V+  A++  GG G     
Sbjct: 301 SALLVYRAAWARDAGQGSSRDAAMAKLAA-------TEHAQQVVDAALQMHGGLGVRTGH 353

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            I + YR+  A  I  G+     L +   L +         + L    G +  
Sbjct: 354 IIEQLYRDVRALRIYEGATEVQHLIIGRDLLREARERSAPAAALPSTPGPNRA 406


>gi|113680425|ref|NP_032123.2| glutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]
 gi|113680427|ref|NP_001038209.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]
 gi|38174647|gb|AAH61158.1| Glutaryl-Coenzyme A dehydrogenase [Mus musculus]
 gi|74222609|dbj|BAE38166.1| unnamed protein product [Mus musculus]
          Length = 438

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 117/311 (37%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D   +
Sbjct: 145 SSLVMHPIYTYGSEEQRQKYLPGL-------------AKGELLGCFGLTEPNHGSDPGGM 191

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D FI+ A+ E       +   + +    GL  
Sbjct: 192 ETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDN----CIRGFILEKGMRGLSA 247

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 248 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 304

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 305 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 364

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 365 E-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 417

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 418 DIHALILGRAI 428


>gi|121606508|ref|YP_983837.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595477|gb|ABM38916.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 393

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 134/384 (34%), Gaps = 35/384 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL---------- 140
           G++ D+ +   A    ++R    G     W R   P     A      RL          
Sbjct: 30  GQQIDESDDRQACREWVKRLGDQG-----WLRYCVPSGSDGALGGALDRLDSRALVILRE 84

Query: 141 -YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                   A    +     +  + L  TP     + P++ S              +    
Sbjct: 85  TLAFHSPLADFAFAMQGLGSGAITLAGTPEQQAAYLPQVASG-------------AKIAA 131

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
             L+E   G+D  A+T++    + G        W  +  ++D ++  A+ +   G   + 
Sbjct: 132 FALSEADAGSDAGAMTTRADPAAGGWTLNGSKTWISNGGIADFYVTFAKTDPAAGTRGIT 191

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316
             + D    GL        +     AT  L+F++        LG LN           + 
Sbjct: 192 TFIIDAGTPGLDASEHIAVMSPHPLAT--LKFTDCRLDGDTQLGALNGGFRLAMQTLDIF 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++   R +L EA+ +A+ R + G  L D  + +  I ++A  + AA  L++R 
Sbjct: 250 RASVAGAALGMARRALVEAVRHAKSRKMFGQTLADFQLTQAKIGEMAALVDAAALLTYRA 309

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   DE + R  ++      A + K    + A  VI  A++  GG G      +   YR+
Sbjct: 310 AWLRDEGERRG-QSVRVTAEAAMAKMTATENAQRVIDMALQMHGGLGVKVGTRVESLYRD 368

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
             A  I  G+     L +   + +
Sbjct: 369 IRALRIYEGATEVQQLIIGKAVLQ 392


>gi|325955609|ref|YP_004239269.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
 gi|323438227|gb|ADX68691.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922]
          Length = 452

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 126/345 (36%), Gaps = 26/345 (7%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
              ++    P +      + A  +  +    A      S      + L  +      W P
Sbjct: 124 GVTYEGYGCPNLPFLMEGVIAHEMARIDASIATFFGVQSGLVMGSIYLCGSDEQKNKWLP 183

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFL 235
           ++             Q+       GLTE    +  A  +T+  +K  +G       KW  
Sbjct: 184 EL-------------QQLKKIGAFGLTEPEVDSGAAGGLTTTCEKTENGWLLNGEKKWIG 230

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           ++P +D FI+ A+             L +    G+  +++K K+  R     ++  +N  
Sbjct: 231 NAPFADVFIIWARDIADDQVKG---FLVEKDNPGISVEKIKGKMALRIVQNGQITLNNCL 287

Query: 296 GFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L  +    +   +  +     A M+    R +   A+ Y R+R   G  +    
Sbjct: 288 VPDTDKLEKANTFKDTANVLRMTRAGVAWMATGCARGAYENALDYTRKREQFGKPIASFQ 347

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  + ++  ++ A   + +RL+   DE K + E A+ A       K +C      ++A
Sbjct: 348 LIQGHLVEMLSNLTAMQTMVYRLSKIQDEGKLKDEHASLA-------KVFCTLRTRDIVA 400

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A E +GG+G + + ++AR   ++ A     G+     L V   +
Sbjct: 401 HAREVMGGNGILLDHNVARFVADAEAIYSYEGTKEINSLIVGRSI 445


>gi|195443362|ref|XP_002069386.1| GK18689 [Drosophila willistoni]
 gi|194165471|gb|EDW80372.1| GK18689 [Drosophila willistoni]
          Length = 420

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 21/287 (7%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSS 237
           S E+       M +  +    GLTE   G+D A + ++ +  S    Y L+G K W  S+
Sbjct: 139 SEEHKERYLPLMAQGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKAYILNGSKTWITSA 198

Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           P++D  I+ A+  +G++  F+V R + D    GL   +++ K   R++ T  +   +   
Sbjct: 199 PIADVLIVWAKCEDGKLRGFIVDRKISDK---GLDTPKIEGKFSLRASPTGMILMDDVHV 255

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILID 351
                L  + G          L++A   ++   +  AEA       Y   R   G  L  
Sbjct: 256 PEENLLPNALGFT---GPFTCLNNARYGIAWGALGAAEACVETARQYTLDRKQFGRPLAA 312

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD   +IA        + +  D+     E       M  + K      A  +
Sbjct: 313 NQLIQKKLADATTEIALGLQACLHVGHLKDQKLHTPE-------MISLLKRNNAGKALDI 365

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +  + +GG+G  +E  I RH     + +   G+ +   L +   +
Sbjct: 366 ARQMRDMLGGNGISDEYHIIRHVMNLESVNTYEGTHDIHALILGRAI 412


>gi|52842158|ref|YP_095957.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52629269|gb|AAU28010.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 375

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 131/374 (35%), Gaps = 32/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  +++DK +  P           +G   +   + F      +         +       
Sbjct: 25  PHAKKFDKEQNIP--RDFFYTLAQNGFLGACIPKQFGGQQWDELTIGIMYESFAKELCSL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++++     +  +    +    + W P+I S E                 L LTE   G
Sbjct: 83  ANILTVLGMVSKSLLQFGSKAQKQIWLPRIASGE-------------TLAALALTEPNIG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +Q     D        K+     ++D F++LA  +G+        +L +    
Sbjct: 130 SDLEHVETQLLDAGDEFILNGSKKYITLGQIADLFLVLANCQGQP-----TAVLVEKGTP 184

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM----- 323
           GL    + N +G RSN   E+ F N        L  S G      I   LD         
Sbjct: 185 GLIISPMSNFLGLRSNMLAEIFFDNCRIPKTNLLG-SIGVGFTYVIQTALDEGRYTTAYG 243

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   +  L  A+ Y + R      L +  ++++ I ++ + + AA  L F         
Sbjct: 244 CVGLGQACLDAALGYTQERKQFNRRLDEHQLIQKMITEMVVQVKAARELCFYA------G 297

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R ++         I KY   KM   V   A++  G +G+ E   + R+YR++    I+
Sbjct: 298 ELRQKKNPAYIAETLIAKYAASKMVVFVSNHALQLFGAAGFDETYPVERYYRDAKVMEII 357

Query: 444 LGSGNAMVLDVLNL 457
            G+     + +  L
Sbjct: 358 EGTSQMHEILISKL 371


>gi|83748604|ref|ZP_00945623.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|207743137|ref|YP_002259529.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83724728|gb|EAP71887.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]
 gi|206594534|emb|CAQ61461.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 622

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/512 (17%), Positives = 180/512 (35%), Gaps = 84/512 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHIIPEVKTALEAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGYFKAANVGTSSYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP     +A              P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQINTFA-------------QPELEGRFYGTMCLSEPQAGSSLSDIVT 178

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +   +      Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGAKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L +     G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVNADRSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQFRPLGPDGQPRAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +   + +          A+ YAR R   G          
Sbjct: 299 YLVGEPHKGLACMFFMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPVGPSGKDA 357

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396
                 ++D   ++R +      +  A  L+   A   DEA+  ++ A  AR      I+
Sbjct: 358 ASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEARGETDPAVRARLGLLLDIL 417

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L 
Sbjct: 418 TPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIHGLDLLG 477

Query: 457 --LLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRDSISLCKEDKG-LARFL----TE 506
             ++ +    F  L   ++  +G    SG   +     ++ L  +    + R L      
Sbjct: 478 RKVVMQDGAAFAALGQRVQATVGRALDSGDTALAGWGRALGLAAQSLATVTRQLWAAGDP 537

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           ++ LA+++  L   G   IA ++LE       
Sbjct: 538 RVTLANASVYLEAFGHVVIAWIWLEQALAAAR 569


>gi|93005689|ref|YP_580126.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
 gi|92393367|gb|ABE74642.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5]
          Length = 601

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/503 (16%), Positives = 176/503 (34%), Gaps = 69/503 (13%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +A+ N PQ       G++   +                G     +      +   +   
Sbjct: 59  HIADKNEPQF-----DGKKVSMIS---DVKVAFDAFRESGFIAGRYSFDDGGMQLPETVM 110

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
              A  ++ A          +  + ++++   +  +   + P++ + ++  T        
Sbjct: 111 TAVAGYFMAANPSTTAYPFLTTAAINVISHFASDEIKNAFMPRMLTGKFTGT-------- 162

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+ +A I +   K  DG Y + G K ++S+   +       ++LA+V
Sbjct: 163 -----MALTEPHAGSSLADIKTTAVKQDDGSYRVKGSKIYISAGDHELSDNIVHLVLAKV 217

Query: 250 EGR------VGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295
            G       +  F VP+      L  G  N +    L +K+G R   +  L F +    +
Sbjct: 218 PGGPGGVKGISLFAVPKYRLNDDLSVGEHNDVHLTGLIHKLGYRGATSTALSFGDAGECY 277

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G+ +     +  M     +     +          ++ YA+ R   G I       
Sbjct: 278 GYLIGEEHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLDYAKDRTQ-GRIAPNNKPE 336

Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMA 397
                +I    +KR +           +L    +N  D      +A  ++E +    ++ 
Sbjct: 337 DAATAIIQHGDVKRMLLAQKAYSEGGISLCLYGSNLIDRINTCEDATLKAELSELLDLLT 396

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV--L 455
           P+ K W  +  P      ++ +GG+GY  E    + +R++  N I  G+     LD+   
Sbjct: 397 PVLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGVQALDLSFR 456

Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-----SLCKEDKGLARFLTEKIAL 510
            L +      + L   + QDL S        L   +      L +    L++ L  + AL
Sbjct: 457 KLWQNKGLGIQILKREITQDLESISTPETAKLAGKLMPYMGHLHEVLVHLSKILQTEKAL 516

Query: 511 ASSA---AALYRAGMNDIADVFL 530
             +    A +       ++ +++
Sbjct: 517 TLTGNAQALMNIFASIVVSWIWI 539


>gi|288915935|ref|ZP_06410317.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288352564|gb|EFC86759.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 385

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 140/396 (35%), Gaps = 28/396 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDR 122
           + L+   +EL  +A     +   Y P    WD+   H P      RR    GL       
Sbjct: 2   FDLTDEQRELRDLAARLAAE--QYRPRAGEWDRNRTHLPDVER--RRLGELGLLALTLPE 57

Query: 123 SFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 R     +         + + A  +       A ++ L  T    K + P + + 
Sbjct: 58  EHGGGGRPLMDALVVLEELAKASPVAAWPVFEACTGPARVIDLFGTQEQKKRYLPAVAAG 117

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E               I + ++E   G+     ++  +   D +      +W   +  ++
Sbjct: 118 E-------------STIAVSISEPDAGSAATDASTTARIDGDEVVLNGTKRWCSGAGFAE 164

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            +++  +     G   +  ++ D    GL +   +  +G R   + ++  S+    +   
Sbjct: 165 KYLVYVRFGPERGAAGIGAVVVDKEAAGLTFGPQEELMGFRGIGSADMFLSDVRVPVEDI 224

Query: 302 L--NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           +        +     +  L +A MS++  + +L     Y R R   G  +    +++ A+
Sbjct: 225 VVPKGGFRTLFAAFSIERLGNATMSLAIGQSALDRTTRYVRERRQFGKEIAQFQLVQAAL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ + + AA  L  R A +       + E       A I K +  + A  V   A++  
Sbjct: 285 ADMVMQVDAARLLIRRAAVNAGVGYPLALE-------ASIAKCFANETAKRVSDLAIQLH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           GG GY  E  + R +R++   ++  G+ +   + + 
Sbjct: 338 GGYGYSAEYEVERMHRDAHGWALAGGTPSMQRVRIA 373


>gi|321456773|gb|EFX67873.1| hypothetical protein DAPPUDRAFT_218549 [Daphnia pulex]
          Length = 436

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 127/382 (33%), Gaps = 31/382 (8%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R +   FH     +++     G+     +          A+ + A  +
Sbjct: 72  QEKLMPRITMANRHE--VFH---REIMQEMGDLGVLGPTIEGYGCAGASSVAYGLLAREV 126

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +           S      +    T    + + PK+              K  +    
Sbjct: 127 ERVDSSYRSAFSVQSSLVMYPIDAFGTTEQKEKFLPKL-------------AKGELVGCF 173

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258
           GLTE   G+D A + ++ +  +  G+Y L+G K W  +SP++D  ++ A+         +
Sbjct: 174 GLTEPNHGSDPAGMETKAKHDAKAGVYILNGSKTWITNSPIADVAVVWAKSLDEGNR--I 231

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316
              L +    G    +++ K   R++ T  +   +        L    G       L   
Sbjct: 232 RGFLVERGTKGFTTPKIEGKFSLRASTTGMIMLEDVVIPESNMLPKVHGLKGPFSCLNSA 291

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++      LA A  Y  +R   G  L    ++++ +AD   +IA A     ++
Sbjct: 292 RYGIAWGTLGAAEFCLAAARDYTLQRQQFGRPLAATQLIQKKMADAMTEIALALQGCIQV 351

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D      +       M  + K   C  +  +     + +GG+G  +E  I RH   
Sbjct: 352 GRLKDNGLVTPD-------MISLLKRNSCGKSLDIARACRDMLGGNGISDEYHIIRHVMN 404

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
             A +   G+ +   L +   +
Sbjct: 405 LEAVNTYEGTHDIHALILGRAI 426


>gi|295668192|ref|XP_002794645.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb01]
 gi|226286061|gb|EEH41627.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb01]
          Length = 547

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/392 (19%), Positives = 142/392 (36%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + WD+ +  P   +  +  R    GL    ++ +      K     +    +     
Sbjct: 163 PYVQEWDEAKAIPEDLYKQMGERGYLAGLMGVAYNPALSKNKVKSVPPEKWDFFHEFIVT 222

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P V K    ++  R         +      I L +TE
Sbjct: 223 DELSRAASGGLVWNLIGGFGIGCPPVMKYGKKELIDR-----IVPGILAGEKRICLAITE 277

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 278 PDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMNGISVLLI 337

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +  
Sbjct: 338 ERSAGGVKTRKM-DCQGMSTSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERIGI 396

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 397 IIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 456

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            +  D   +     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 457 QSMDDTEAAFRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYTRGGQGGKIERL 511

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    K    F
Sbjct: 512 YRDVRAYAIPGGSEEIMLDLSMRQSLKVHQFF 543


>gi|26347561|dbj|BAC37429.1| unnamed protein product [Mus musculus]
          Length = 378

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 117/311 (37%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D   +
Sbjct: 85  SSLVMHPIYTYGSEEQRQKYLPGL-------------AKGELLGCFGLTEPNHGSDPGGM 131

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D FI+ A+ E       +   + +    GL  
Sbjct: 132 ETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDN----CIRGFILEKGMRGLSA 187

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 188 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 244

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 245 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 304

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 305 E-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 357

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 358 DIHALILGRAI 368


>gi|256375704|ref|YP_003099364.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255920007|gb|ACU35518.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 389

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 111/363 (30%), Gaps = 37/363 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  ++   G    +  + +  +              L  +L    +       A  +  
Sbjct: 49  ELQAKARASGFFGVLTPQEYGGMGLGAVMAA-----LLETELGRSFVPFRFGGYADNILF 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                  + +     S E                   +TE   G+D  AI +  ++  D 
Sbjct: 104 HGNEEQKERYLLPTISGE-------------RVSCFAITEPGAGSDAKAIRTSARRDGDD 150

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            + +SG K F++    +D  ++ A  +   G    V   L D            + +G  
Sbjct: 151 -WVISGEKTFITGGHEADFTMVFAVTDRERGADGGVTCFLVDRDMG--WRSEPISTMGQW 207

Query: 283 SNATVELEFSNTFGFLLGDLN-VSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIHY 338
                 L F          L  V  G    M+      YL  A  ++      +  A+  
Sbjct: 208 G--PAALVFDEVRVPSENVLGEVGGGFRLAMQWIGQGRYLLPAR-ALGSCERLVEMAVEQ 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  + +   ++  IAD A+++ A   L    A   D+                
Sbjct: 265 ARNRVTFGKPIAEYQAIQWMIADSAVEVEALRWLVLHAAWLVDQGVDSRHAQ-------S 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K +    A  ++   ++  GG GY  E  + R YRE     I  G+       +   L
Sbjct: 318 IAKLYGGVKANEIVDRVLQIHGGMGYTRELPVERWYRELRLLRIYEGTDEIQRRTIARNL 377

Query: 459 EKG 461
            KG
Sbjct: 378 LKG 380


>gi|302546539|ref|ZP_07298881.1| putative glutaryl-CoA dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302464157|gb|EFL27250.1| putative glutaryl-CoA dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 390

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/408 (18%), Positives = 134/408 (32%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T ++ A  A+   P +  +   GE        P    L R     G        
Sbjct: 20  DLAVRTTVRQWA--ADRVLPHIADWYERGEL-------PGIRELTRELGSLG--ALGMSL 68

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           +        A +   A L L A        +      +   +    +    + W P++ S
Sbjct: 69  TGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQQWLPRMAS 128

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V    GLTE   G+D A + +  ++            W  +  ++
Sbjct: 129 GE-------------VIGCFGLTEPDHGSDPAGMRTYAKRDGTDWVLTGRKMWITNGSVA 175

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              ++ A  +  +  F+VP         G     +K+K   R++ T EL           
Sbjct: 176 GVAVVWAHTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDEVRLPADA 230

Query: 301 DLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L   TG    +  L +    I+  ++   R S   A+ YAR R   G  +    + +  
Sbjct: 231 VLPEVTGLRGPLSCLSHARYGIIWGALGAARASFTSALEYARTREQFGRPIGGFQLTQAK 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A   
Sbjct: 291 LADMAVELHKGVLLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIEICRTARTI 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 344 LGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 390


>gi|260431320|ref|ZP_05785291.1| long-chain specific acyl-coa dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415148|gb|EEX08407.1| long-chain specific acyl-coa dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 349

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 129/378 (34%), Gaps = 44/378 (11%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              V  E  +  E        EL        P + A+   G   D+           R++
Sbjct: 8   APWVTDEHRMFAEMAGRFMDDEL-------VPNIEAWAEQGV-VDR--------DFWRKA 51

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        F  V                ++ +AG            +    +   
Sbjct: 52  GETGLMAGAIPEEFGGVGGGMGFDAVTI-YEQTSRGDAGWGYGIQSIVIHYITAYGSEDQ 110

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W PK+ S E                 L +TE   G+D+ AI +  +K  +  Y ++G
Sbjct: 111 KRKWLPKLASGEM-------------VGALAMTEPSTGSDVQAIRTTAEKDGN-SYRMNG 156

Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K F+++   +D  I+ A+ +  +G   V  + +E     G    R   K+G ++N T E
Sbjct: 157 SKIFITNGQTADLIIVAAKTDKSLGAKGVSLIAVETEGAEGFRRGRNLKKLGMKANDTAE 216

Query: 289 LEFSNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F +    +   L      G  + MK L    L   IM++  +  ++AE + Y + R  
Sbjct: 217 LFFEDVKVPMTNLLGSEEGQGFYQLMKQLPWERLTIGIMALGAIDFAIAETVKYTQERKA 276

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  ++D    +  +A+         +         +  +  +         A + KYW 
Sbjct: 277 FGQRVMDFQNTRFKLAECKTKAEVLRSFVNDCIAKLEAGQLDAA-------TASMVKYWG 329

Query: 405 CKMAPAVIAEAMECIGGS 422
            ++   ++ E ++  G  
Sbjct: 330 SEVQNEIMHECLQLFGAM 347


>gi|84517024|ref|ZP_01004381.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
 gi|84509142|gb|EAQ05602.1| acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53]
          Length = 387

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 127/365 (34%), Gaps = 32/365 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  +++  GL+ +                +   R    A           V   S + 
Sbjct: 43  REIQAKAMAAGLYAANMPEEVGGAGLDTLSWLLYERELGRANYALHWTC---VARPSNIL 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T    + +               P  +      L +TE   G+D+  + +  ++   
Sbjct: 100 LAGTKAQREKYL-------------FPCLRGETWDCLAMTEPGAGSDLRGMQANARQDG- 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIM--LAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G + L+G K F+S      F +  +A  E    R     +     D    G   +     
Sbjct: 146 GDWVLNGTKHFISHADIAGFTIAFMATGEEDTPRGPKKKITAFFVDKGTPGFTVREGYRN 205

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + +R  +   L+F +       +LG+++       D      L  A   +     +L  A
Sbjct: 206 VSHRGYSNAILDFDDCRVPAENILGEIHKGFEVANDWLGATRLQVAATCLGRADRALDHA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +HYA  R   G  +     +   +AD+A+++ AA  L++     FD+      + A A++
Sbjct: 266 VHYAAERRQFGQQIGKFQGVSFKLADMAMELKAAELLTWEAGWKFDQGSVTEADMAMAKL 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A        ++   V  EA++  GG G +++  + R +R++    I  G+       + 
Sbjct: 326 KA-------SEVLAMVADEAIQIHGGMGLMDDLPLERIWRDARVERIWEGTSEIQRHIIS 378

Query: 456 NLLEK 460
             L +
Sbjct: 379 RQLLR 383


>gi|218463525|ref|ZP_03503616.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 314

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 112/306 (36%), Gaps = 37/306 (12%)

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               K + P + S E             +    GLTE   G+D   + ++ +KI+ G   
Sbjct: 37  DEQKKKYLPGLVSGE-------------LIGCFGLTEPDAGSDPGGMKTRAEKITGGYRL 83

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +SP++D F++ A+ E       +   + +    GL   ++  K+  R++ T 
Sbjct: 84  RGSKMWISNSPIADVFVVWAKSEAH--NNEIRGFVLEKGMKGLSAPKIGGKLSLRASITG 141

Query: 288 ELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
           E+           +L  ++   GP         L+ A   +S   +  AE     A  Y 
Sbjct: 142 EIVMDGVEVTEDAILPGVSGLKGP------FGCLNRARYGISWGVMGAAEDCWFRARQYG 195

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L    + ++ +AD+  +I      S R+    DE K        A  M  +
Sbjct: 196 LDRKQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDEHK-------MAPEMVSL 248

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K   C  A  +   A +  GG+G   E  + RH +     +   G+ +   L +L   +
Sbjct: 249 VKRNNCGKALEIARHARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQ 307

Query: 460 KGTNLF 465
            G   F
Sbjct: 308 TGLQAF 313


>gi|296233055|ref|XP_002761832.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Callithrix
           jacchus]
          Length = 438

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 129/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERIDSGYRSAMSVQSSLVMYPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNCGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   +++ K   R++AT  +   +       + N+  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPKIQGKFSLRASATGMIIMDSVEVP---EENMLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGITWGVLGASEFCFHTARQYALDRIQFGVPLAKNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|254561422|ref|YP_003068517.1| methylsuccinyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
 gi|254268700|emb|CAX24659.1| methylsuccinyl-CoA dehydrogenase [Methylobacterium extorquens DM4]
          Length = 562

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 143/368 (38%), Gaps = 37/368 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           ++ +    G+        +  +   +A     +     A +  G L + S  +A ++   
Sbjct: 214 IIEKMAELGVFGLTIPEEYGGMGMPKAAMCVVSEELSRAYIGVGSLGTRSEIAAELILCG 273

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P I S +  PT                TE   G+D+A++ ++  K  D  
Sbjct: 274 GTEEQKQRFLPGIASGDILPTAV-------------FTEPNTGSDLASLRTKAVKDGD-Q 319

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQR 274
           + +SG+K +++ P+ +D   +L + +    G   +  L+ +             GL    
Sbjct: 320 WKISGNKTWITHPVRADIMTVLVRTKPEEKGHRGLSMLIAEKPRGTDEEPFPVEGLSGGE 379

Query: 275 LKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           ++  +G R     EL F +       L       G  + M+      + +A  ++   + 
Sbjct: 380 IE-VLGYRGMKEYELSFEDFAVPANNLLGEIEGKGFAQLMQTFESARIQTAARAIGVAQS 438

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R   G  L++ P +   +A +A++I  A  L++  A   DE K    EA
Sbjct: 439 ALDIGLRYAEERVQFGKALVEFPRVADKLAMMAVEINIARQLTYFSAREKDEGKRCDLEA 498

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+++         ++A A    A++  GG+G+  E  I+R   ++   SI  G+    
Sbjct: 499 GMAKLL-------GARVAWAAADNALQIHGGNGFALEYKISRVLCDARILSIFEGAAEIQ 551

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 552 AQVIARRL 559


>gi|62510645|sp|Q8HXX8|GCDH_MACFA RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD;
           Flags: Precursor
 gi|23574728|dbj|BAC20590.1| glutaryl-CoA dehydrogenase [Macaca fascicularis]
          Length = 438

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 36/308 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    + + P++              K  +    GLTE   G+D +++ ++ 
Sbjct: 149 MHPIYAYGSEEQRQKYLPRL-------------AKGELLGCFGLTEPNSGSDPSSMETRA 195

Query: 219 QKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRL 275
           +  S +  Y L+G K W  +SPM+D F++ A+  +GR+  FL+     +    GL   R+
Sbjct: 196 RYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGRIRGFLL-----EKGMRGLSAPRI 250

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334
           + K   R++AT  +           + N+  G          L++    ++   +  +E 
Sbjct: 251 QGKFSLRASATGMIIMDGVEVP---EENMLPGASSLGGSFGCLNNGRYGIAWGVLGASEF 307

Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
               A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+     
Sbjct: 308 CLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKA----- 362

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A  M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ +  
Sbjct: 363 --APEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIH 420

Query: 451 VLDVLNLL 458
            L +   +
Sbjct: 421 ALILGRAI 428


>gi|260815679|ref|XP_002602600.1| hypothetical protein BRAFLDRAFT_281524 [Branchiostoma floridae]
 gi|229287911|gb|EEN58612.1| hypothetical protein BRAFLDRAFT_281524 [Branchiostoma floridae]
          Length = 434

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 126/360 (35%), Gaps = 30/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+            V   A+ + A  +  +           S      + 
Sbjct: 91  REIMTEMGQLGVLGPTIKGYGCAGVSSVAYGLIAREVERVDSAYRSAFSVQSSLVMYPIN 150

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P++ + E             +    GLTE   G+D   + ++ +   +
Sbjct: 151 AYGSEVQKRKYIPRLATGE-------------LIGCFGLTEPNHGSDPGGMETRAKWDEN 197

Query: 224 GI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
              Y L+G K W  +SP++D FI+  + E       V   + +    GL   +++ K   
Sbjct: 198 KKCYILNGAKSWITNSPIADVFIVWGKCEDGR----VRGFILEKGMGGLSAPKIEGKFSL 253

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R++ T ++   +       LL  ++   GP   +        +  ++      L  A  Y
Sbjct: 254 RASTTGQIVMEDVEVPQDNLLPGVHGLAGPFGCLNN-ARFGISWGTLGAAEFCLETARQY 312

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    ++++ +AD+  +I        ++    D+ ++  E       M  
Sbjct: 313 TLDRIQFGVPLARNQLIQKKMADMLTEITLGLQSCLQVGRLKDQGRATPE-------MIS 365

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  +  +   A + +GG+G  +E  + RH     A +   G+ +   L +   +
Sbjct: 366 MVKRNSCGKSLDIARSARDMLGGNGICDEYHVIRHVMNLEAVNTYEGTHDIHALILGRAI 425


>gi|321260949|ref|XP_003195194.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461667|gb|ADV23407.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 424

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 133/370 (35%), Gaps = 41/370 (11%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           F PA   +LR     GL  +         V   ++ + A  +  +       +   S   
Sbjct: 78  FDPA---ILREMGELGLLGATIQGYGCAGVSSVSYGLIAREVERVDSGYRSAMSVQSSLV 134

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    + + P++ + E             +    GLTE   G+D +++ +  
Sbjct: 135 MHPINEFGSDAQKEKYLPQLATGE-------------IVGCFGLTEPNHGSDPSSMETTA 181

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            K +DG        W  ++P++D F++ A+V   G  G   V   L +    GL    +K
Sbjct: 182 TKTTDGWVLNGSKTWISNAPVADLFVIWARVVENGEKGK--VRGFLVEKGTPGLSAPAIK 239

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGM 328
           NK+  R++ T  +   +     G +L   N    P         L++A   +       +
Sbjct: 240 NKMSLRASITGSIFMEDVKLSNGSVLPKSNGLGSP------FSCLNNARYGISWGVMGAL 293

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              LA A  YA  R+     L    ++++ +AD +  +      S +L    D+ +  S+
Sbjct: 294 EDCLARARDYALERNQFKRPLASFQLVQKKLADASTAVTLGLLGSLQLGRLKDKGEWSSD 353

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  M  + K   C  A       ++ +GG+   +E  I RH       +   G+ +
Sbjct: 354 -------MVSMMKRNNCGEALHHSRVLLDILGGNACSDEYHIGRHAANLQVANTYEGTND 406

Query: 449 AMVLDVLNLL 458
              L +   +
Sbjct: 407 IHALILGKAI 416


>gi|257455079|ref|ZP_05620320.1| acyl-CoA dehydrogenase [Enhydrobacter aerosaccus SK60]
 gi|257447524|gb|EEV22526.1| acyl-CoA dehydrogenase [Enhydrobacter aerosaccus SK60]
          Length = 607

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/492 (16%), Positives = 167/492 (33%), Gaps = 70/492 (14%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V  +P     L+     GL  + +   +  +    + +       + A          
Sbjct: 71  ERVTINPEVGVALKAFADAGLIATSFSVEWNGMSLPSSIERAGVAYMMAANPGTTGYAFL 130

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++         K +   + + +   T             + L+E + G+ +A I
Sbjct: 131 TIGNANLLMAHGDREKVKPYVDAMIAGKCFGT-------------MCLSEPQAGSSLADI 177

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-----VGCFLVPRLLED 264
            ++    SDG Y L G+K ++S    D       ++LA++         G   +      
Sbjct: 178 RTRAVLSSDGRYRLFGNKMWISGGDHDISENIVHLVLAKIPDENGQLLPGVQGISLFTVP 237

Query: 265 G----------SPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLGDLNV 304
                        N +    + +K+G R      L F              G L+G+   
Sbjct: 238 KKLLNKEGQASERNDVVLAGINHKMGYRGTVNTVLNFGEGRFTPEGEAGAIGELIGEPGK 297

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  M     +   + + +        A+ YA+ R   G              +I  
Sbjct: 298 GLAYMFHMMNEARISVGLGAAALGYTGYLHALDYAKTRAQ-GRTRNERNPASAQIPIIQH 356

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCK 406
             ++R +       +   AL    +   D+  S  EE       A   ++ P+ K W  +
Sbjct: 357 ADVRRMLLAQKSYASGGLALCLYASRLVDDINSLEEEEQQKQALALLDLLTPVVKSWSSQ 416

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLF 465
                   A++  GG GY  E ++ + YR++  N I  G+     LD+L         L 
Sbjct: 417 WGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGVQALDLLGRKTYINNGLS 476

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE-------KIALASSAAALY 518
             L  T  ++  ++ +KV  +   + +L +  + +     +       ++ LA++A  L 
Sbjct: 477 MTLLGTKIEETCANARKVTQLQNHAATLSQAWQQILDITAKLHAITDVELRLANAANYLE 536

Query: 519 RAGMNDIADVFL 530
             G   +  ++L
Sbjct: 537 AFGHMIVGWLWL 548


>gi|226366590|ref|YP_002784373.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226245080|dbj|BAH55428.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 391

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 133/381 (34%), Gaps = 37/381 (9%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +   G   +++        L  ++   GL        F         ++  A      +
Sbjct: 42  PHDAAGLPRERLI------PLQEKARSLGLWAMQTPEEFGGAGLSVLGQVVVAEEAAKCR 95

Query: 146 LEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           + A      +   +   V    T    + +A  I               T+      ++E
Sbjct: 96  MGAFFPALGAFGGNPPNVMYTATEEQFRRYAQPIIDG------------TATKSYTSISE 143

Query: 205 KRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
             GG+D A AI  +  +  D         W   +  +D  ++ A+     G   +   + 
Sbjct: 144 ASGGSDPARAIKLKAVRNGDHYVLNGSKMWTSHAEKADWGVVYART--GEGRSGISCFIV 201

Query: 264 DGSPNGLCYQRLKNKIGNRSN-ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
           +    G+ + R+    G  ++ A  EL F +       L+G+         D  +   + 
Sbjct: 202 EKDSPGMSFHRI----GVMASFAPYELHFDDVRVPVENLIGEEGRGFALASDFLVHGRII 257

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   +   + +L  A  +A+ R V GG L D+  ++  + D  +++ AA  L ++ A +
Sbjct: 258 YAAGPIGIAQTALDMACRWAKDRQVFGGTLADKQGVQWMLVDCEVELRAARLLMYQAAWN 317

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D  K    +       A ++K +  ++A  VI   ++  G  G  +E  + R +R+   
Sbjct: 318 ADLGKDVRTD-------ASVSKMYGTEVAYKVIDRCIQIHGALGLSDELPLERWFRDLRV 370

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             +  G+     + +   L K
Sbjct: 371 KRLGEGATEVQRVVIARELLK 391


>gi|171694311|ref|XP_001912080.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947104|emb|CAP73909.1| unnamed protein product [Podospora anserina S mat+]
          Length = 615

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 113/566 (19%), Positives = 206/566 (36%), Gaps = 99/566 (17%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQEL 73
           S++ F   QP   +  N +  D     +   F        +  +   +G+ VLS    + 
Sbjct: 6   SNTGFIQQQP---VINNQFYDDVSYQRVARLFLPSDILDKITPDAAQIGQEVLSQQVFDW 62

Query: 74  ARMANYNTPQLHAYGP--GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
              A +N P L   G    G+   ++                 +    +D    P  R  
Sbjct: 63  VTDAEHNQPYLRGNGRDSFGKPKSELVV---------------VVALNYDTDHGPYTR-- 105

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKA 189
              ++  R +L     A  L   ++   +   L     +    A K+    RE      +
Sbjct: 106 --LVQFLRCHLWEASCANTLCPAAMQDGAARLLQR--HLFTSAAKKLSPIEREVFQNAYS 161

Query: 190 PMQKTS----VAIGLGLTEKRGGTDIAAITSQGQKISD-----------------GIYCL 228
            +           G  +TE+ GG+D++   +                        G + +
Sbjct: 162 HLTSRDPTKIWTSGQWMTERTGGSDVSQTETVATYDPFPSSAPVPLASQSESIPLGPWSI 221

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSP-------------NGLCYQ 273
           SG KWF S+  S   I+LA+     G   F  P   ++ S              NG+  Q
Sbjct: 222 SGFKWFSSATDSHMTILLARTHPSKGVSAFFAPMRRDNPSLVSHTGESGNGTELNGITIQ 281

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLK+K G +S  T ELE     G+L+G+       +  +  +  + + + S+  +  SL 
Sbjct: 282 RLKHKFGTQSLPTAELELKGMRGWLIGEEGKGIQEISTILNITRVHTTVSSMGYLGRSLG 341

Query: 334 EAIHYARRRHV---SGGILI--DQPVMKRAIADIALDIAAATALSFRLANS--FDEAKSR 386
            A  +A  R V    G  +     P+  R +A++  D      L+F   ++   DE    
Sbjct: 342 IARSFALVRPVGMGKGKRIALSSHPLHMRTLANMTTDYHGMMLLTFYTIHALGLDERFLP 401

Query: 387 SEEAA-------------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI-----EER 428
           S +AA               R+++ + K + C+    ++   ME +GG GY+     E  
Sbjct: 402 SNQAATKVPTPPKELVQPLLRVLSSLHKSYVCETTVPLVYGCMEALGGVGYMQNVESEHL 461

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQDLGSSGKKVIT 485
           +I+R +R+    +I  G+ + +  D L  L+    G    + L   +     +   +   
Sbjct: 462 NISRLFRDCCVGAIWEGTTDVLASDTLRALKHPLSGKQSVQALDWLILSSKNAGLVEEWQ 521

Query: 486 ILRDSISLCKEDKGL--ARFLTEKIA 509
           +L++ I    +++ L  AR L  +IA
Sbjct: 522 VLKNKIDTGNQEELLPEARGLVFRIA 547


>gi|227536445|ref|ZP_03966494.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243700|gb|EEI93715.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 386

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 127/349 (36%), Gaps = 38/349 (10%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM------VALMTTP 168
           L        + P     A   + +   +M +LEAG     S  S         +    + 
Sbjct: 53  LGAIGALGPYIPQEYGGAGLDQLSYGLIMQELEAGDSAVRSAASVQSSLVMFPIYTYGSE 112

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + PK+ + E             +    GLTE   G+D  A+ ++  K  DG    
Sbjct: 113 EQKRKFLPKLATGE-------------LIGSFGLTEPNHGSDPTAMETRLSKDRDGYILN 159

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  ++P+ D  ++ A+ E       V  ++ +    G       NK   R++ T E
Sbjct: 160 GAKMWITNAPVCDLAVVWARDEEGK----VRGIIVEREMKGFTTPETHNKWSLRASKTGE 215

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343
           L F +     +   N+          L  L+SA   +S   +  A      A+ Y+  R 
Sbjct: 216 LIFEDVR---IPQENILPDVSSMKGPLSCLNSARYGISWGVIGAAVDCYQTALRYSLERQ 272

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    + ++ +A+   +I  A  LS+RL    +E K+  ++ + A+         
Sbjct: 273 QFGKPVASYQLQQKKLAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMAKR-------N 325

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              MA  +  E+ + +G  G + E  I RH     +     G+ +  +L
Sbjct: 326 NVNMALQIARESRQMLGAMGIVGEFPIMRHMMNLESVITYEGTHDIHLL 374


>gi|254439652|ref|ZP_05053146.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
 gi|198255098|gb|EDY79412.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter
           antarcticus 307]
          Length = 388

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 104/292 (35%), Gaps = 16/292 (5%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            +     + P  +      L +TE   G+D+  +     +   G + L+G K F+S    
Sbjct: 105 GDQIERYRDPAVRGERMDALAMTEPGAGSDVRGMKCSAVRDG-GDWVLNGTKHFISGADH 163

Query: 241 DAF-IMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294
             F I+          R     +   L D    G   +     + +R    + L+F +  
Sbjct: 164 ADFLIVFVATGEDQTPRGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMILDFDDCR 223

Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +LG+++     + +      +  A MSV   R     A++YA  R   G  +   
Sbjct: 224 LPNAQVLGEVDGGFAVMNEWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQKIGKF 283

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +AD+  +I AA  L+   A+  D+          A       K +  +M   V 
Sbjct: 284 QGISFQLADMITEIDAADLLTLAAADRLDKGLP-------ANREIASAKLYASEMLGRVT 336

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             A++  GG G +++  + R +R++    I  G+       +   + +    
Sbjct: 337 DAAIQVHGGMGLMDDFPLERFWRDARVERIWDGTSEIQRHIISREMLRALGA 388


>gi|301630321|ref|XP_002944270.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 398

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/427 (17%), Positives = 143/427 (33%), Gaps = 37/427 (8%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           +A+ P        L  +      A   A  A Y   QL        R +K +      A+
Sbjct: 1   MAHAPFHWEDPFLLDQQLSADERAIRDAAAA-YCQGQLAPRVRDMFRHEKTDT-----AI 54

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
            R     GL       ++        ++ + A  +  +           S      +   
Sbjct: 55  FREMGALGLLGPTIPEAYGGAGLNYVSYGLIAREIERVDSGYRSMASVQSSLVMVPIHTF 114

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T    + + P + S              ++    GLTE   G+D  ++ ++  K++ G 
Sbjct: 115 GTEAQKQKYLPGLASG-------------ALIGCFGLTEPDHGSDPGSMAARATKVAGGY 161

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  W  +SP++D F++ A+     G    +   + +    GL    +  K+G R++
Sbjct: 162 RLKGSKMWITNSPVADVFVVWAKEVSEGGAVGPIRGFVLEKGWKGLAAPAIHGKVGLRTS 221

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---- 340
            T E+   + F           G          L+SA   ++   +  AE   +      
Sbjct: 222 ITGEIVMDDVFVPEENAFPEVHGLK---GPFTCLNSARYGIAWGAMGAAEFCWHTARQYT 278

Query: 341 -RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L    ++++ +AD+  +IA     + R     DE  +       A     +
Sbjct: 279 LERQQFGRPLAANQLVQKKLADMQTEIALGLQAALRFGRMKDEGIA-------AVEGTSL 331

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K   C  A  +   A + +GG+G  +E  +ARH       +   G+ +   L +L   +
Sbjct: 332 IKRNNCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHAL-ILGRAQ 390

Query: 460 KGTNLFE 466
            G   F 
Sbjct: 391 TGIAAFA 397


>gi|195051628|ref|XP_001993137.1| GH13244 [Drosophila grimshawi]
 gi|193900196|gb|EDV99062.1| GH13244 [Drosophila grimshawi]
          Length = 420

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 118/312 (37%), Gaps = 34/312 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   +    T +  + + P              M +  +    GLTE   G+D A +
Sbjct: 127 SSLAMGAIYDYGTDQQKQKYLPS-------------MAQGKLIGAFGLTEPNHGSDPAGM 173

Query: 215 TSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++ +  S    Y L+G K W  S+P++D  ++ A+  +G+V  F+V R +   S  GL 
Sbjct: 174 ETRAKYDSKTKTYILNGSKTWITSAPIADVIVVWAKGEDGKVRGFIVDRQM---SSKGLA 230

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +++ K   R++ T  +   +        L  + G          L++A   ++   + 
Sbjct: 231 TPKIEGKFSLRASPTGMIHMDDVHVPEENLLPNALGFSGPFN---CLNNARYGIAWGALG 287

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AEA       Y   R   G  L    ++++ +AD   +IA        +    D+    
Sbjct: 288 AAEACVETARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGMQACLHVGRLKDQKLHT 347

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E       M  + K      A  +  +  + +GG+G  +E  + RH     + +   G+
Sbjct: 348 PE-------MISLLKRNNAGKALDIARQMRDMLGGNGISDEYHVIRHVMNLESVNTYEGT 400

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 401 HDIHALILGRAI 412


>gi|332559771|ref|ZP_08414093.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
 gi|332277483|gb|EGJ22798.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N]
          Length = 403

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 36/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           + +  PA    +      GL  +     +  +     ++ + A  +  +       +   
Sbjct: 56  EEQTDPAIFREMG---EMGLLGATVPEEYGGLGASYVSYGLIAREIERVDSGYRSMMSVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D A +
Sbjct: 113 SSLVMYPIYAYGSEDQRRRYLPGL-------------AKGELIGCFGLTEPDAGSDPAGM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K ++G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 160 KTVARKSAEGYVLHGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPK 217

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+                   VE +K     L+ A   +S   +  A
Sbjct: 218 IGGKLSLRASITGEIVMEGVEV----GEEALLPGVEGLKGPFGCLNRARYGISWGVLGAA 273

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +A R     R   G  L    + +  +A++  DIA     S R+    DEA +   
Sbjct: 274 EACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALGAQASLRVGRLLDEANA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M  I K   C  A      A +  GG+G  EE  + RH       +   G+ +
Sbjct: 331 ----APEMISIVKRSNCGKALEAARHARDMHGGNGIQEEFHVMRHMANLETVNTYEGTHD 386

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +   +      F
Sbjct: 387 IHALILGRAITGLQAFF 403


>gi|148679020|gb|EDL10967.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_a [Mus musculus]
          Length = 454

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 117/311 (37%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D   +
Sbjct: 161 SSLVMHPIYTYGSEEQRQKYLPGL-------------AKGELLGCFGLTEPNHGSDPGGM 207

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D FI+ A+ E       +   + +    GL  
Sbjct: 208 ETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDN----CIRGFILEKGMRGLSA 263

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 264 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 320

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 321 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 380

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 381 E-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 433

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 434 DIHALILGRAI 444


>gi|295107103|emb|CBL04646.1| Acyl-CoA dehydrogenases [Gordonibacter pamelaeae 7-10-1-b]
          Length = 381

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 130/371 (35%), Gaps = 28/371 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
             H      +   +  G         F         ++  A        EA  L  PS+ 
Sbjct: 34  RNHEYPQKAVDALVEAGFTTLGIPEEFGGTPTDTLTQVMVAE-------EAHALGYPSLC 86

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +   T       +  K    E          +      LG TE + G+D AA+ + 
Sbjct: 87  W---INFATEVDDILTFGNK----EQQEKILGYALEGKKPFTLGFTEPQAGSDSAAMATT 139

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRL 275
             K  DG   ++G+K F +S     +++     G            L      G+  ++L
Sbjct: 140 ATKR-DGKVYINGNKTFNTSADRAPYMLCVCRSGVNESPYKDFSMYLFPMDRPGVAIEKL 198

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILI--YLDSAIMSVSGMRVSL 332
            +KIGN    T E+   +        +     G  + MK      L     +V   R + 
Sbjct: 199 -DKIGNNMCGTYEVHLDDVECEESDLVGEECKGFYQLMKNFEVERLTICAANVGMARCAY 257

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            EA+ YA +R   G I+    +++  + D+ + I     L ++ A   D  +S       
Sbjct: 258 DEALRYAAQRMQFGKIIGSFQLVQEKLVDMRIKIENMQNLLYKTAWKKDNGES------- 310

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             I + + K +  + A  VI +AM+ +GG GY  +  I+R +R+     I+ G+   MV 
Sbjct: 311 IMIDSSLVKRYTGQAAFEVIDDAMQIMGGIGYTHDCRISRLWRDQRVYRIMAGTEEIMVH 370

Query: 453 DVLNLLEKGTN 463
                L K   
Sbjct: 371 TAGRALIKEAQ 381


>gi|148679021|gb|EDL10968.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_b [Mus musculus]
          Length = 447

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 117/311 (37%), Gaps = 34/311 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D   +
Sbjct: 154 SSLVMHPIYTYGSEEQRQKYLPGL-------------AKGELLGCFGLTEPNHGSDPGGM 200

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +    +  Y LSG K W  +SP++D FI+ A+ E       +   + +    GL  
Sbjct: 201 ETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDN----CIRGFILEKGMRGLSA 256

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            R++ K   R++AT  +   +       + NV             L++A   ++   +  
Sbjct: 257 PRIEGKFSLRASATGMIIMDSVEVP---EENVLPNVSSLAGPFGCLNTARYGITWGVLGA 313

Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE     A  YA  R   G  L    ++++ +AD+  +I        +L    D+ K+  
Sbjct: 314 AEFCLHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATP 373

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E       M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ 
Sbjct: 374 E-------MVSMLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTH 426

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 427 DIHALILGRAI 437


>gi|239929900|ref|ZP_04686853.1| acyl-CoA dehydrogenase FadE7 [Streptomyces ghanaensis ATCC 14672]
 gi|291438235|ref|ZP_06577625.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291341130|gb|EFE68086.1| glutaryl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 397

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 121/369 (32%), Gaps = 30/369 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           PA   L +     GL     +      +    + +    L          +      +  
Sbjct: 56  PAVRELAKELGALGLLGMHLEGYGCAGMSAVDYGLACLELEASDSGIRSLVSVQGSLAMY 115

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + W P++ + E                  GLTE   G+D A + ++ ++
Sbjct: 116 AIWRHGTEEHKQRWLPRMAAGE-------------AIGCFGLTEPDHGSDPAGMRTRARR 162

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++D  ++ AQ +  V  F+VP         G   + +++K+ 
Sbjct: 163 DGSDWVLDGTKMWITNGSVADVAVVWAQTDEGVRGFVVPT-----GTPGFSARTIQHKMS 217

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++ T EL           +  ++    GP+  +           ++   R +   A+ 
Sbjct: 218 LRASVTSELVLDGVRLPAEAVFPEVRGLRGPLSCL-NEARYGILWGAMGAARSAFRSALE 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   G  +    + +  +AD+A+++   T L+  L    D    R E+        
Sbjct: 277 YAGQRTQFGRPIGGFQLTQAKLADMAVELTNGTLLALHLGRRKDAVGLRPEQ-------V 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K      A  +   A   +G +G   E  + RH     +     G+     L +   
Sbjct: 330 SLGKLNNVNKALEICRTARTILGANGISLEYPVIRHMNNLESVLTYEGTPEMHTLVIGQA 389

Query: 458 LEKGTNLFE 466
           L  G   F 
Sbjct: 390 LT-GQAAFR 397


>gi|15791260|ref|NP_281084.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
 gi|10581893|gb|AAG20564.1| glutaryl-CoA dehydrogenase [Halobacterium sp. NRC-1]
          Length = 337

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 112/349 (32%), Gaps = 23/349 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G +    D    P V + A+ +    L                     +    +    
Sbjct: 3   EMGFYAPNLDGYGLPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAFGSEAQK 62

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P + + E                  GLTE   G++ +A+ +  +   D        
Sbjct: 63  ERWLPALGAGE-------------AVGCFGLTEPEHGSNPSAMETTAEPDGDEYVLNGSK 109

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP++D  ++ A+  G  G   V   L +   +G+    +  K+  R++ T E+  
Sbjct: 110 TWITNSPIADVAVVWARDHGEDGTP-VRGFLVETDRDGVTTNEIDEKLSLRASITGEISL 168

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            N        L    G    +  L       A  +V   R     A  YA  R      +
Sbjct: 169 RNVRVPAESRLPGVEGMKGPLSCLTQARYGIAWGAVGAARNCFETAREYATDREQFDQPI 228

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               + +  +A++A  I  +  L+ RLA   +    R +  + A+           +MA 
Sbjct: 229 GGFQMQQDKLAEMATQITTSQLLAHRLAGLKERGDLRPQHVSMAKR-------NNVRMAR 281

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                A E +GG+G   +    RH           G+ +   L +   L
Sbjct: 282 DQARVAREMLGGNGITTDYPPMRHMANMETVYTYEGTHDIHTLILGEDL 330


>gi|89055304|ref|YP_510755.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88864853|gb|ABD55730.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 404

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 124/377 (32%), Gaps = 37/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP- 154
           +    P   A +      GL           +          AR           +MS  
Sbjct: 57  EEHVTPDVFAEMG---EMGLLGITIPEHLGGLGAGYVSYGLVAREVERVDSGYRSMMSVQ 113

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +                +     GLTE   G+D A +
Sbjct: 114 SSLVMYPINAYGSDEQRQKYLPGL-------------AAGTKIGCFGLTEPDAGSDPAGM 160

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K   G        W  ++P++D F++ A+ +   G   +   + +    GL   +
Sbjct: 161 KTTAKKTEGGYVINGAKMWISNAPIADVFVIWAKSDAHGGK--IRGFVLEKGMKGLSAPK 218

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+   N         +     VE +K     L+ A   +S   +  A
Sbjct: 219 IGGKLSLRASVTGEIVMDNVEV----GEDALLPGVEGLKGPFGCLNRARFGISWGVMGAA 274

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           E   +  R     R   G  L    + ++ +AD+  +IA     + R     ++     E
Sbjct: 275 EDCWHRARDYGLDRVQFGRPLAQTQLFQKKLADMQTEIALGLQGALRAGRMMEDGTCGPE 334

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  +  + K   C  A  +   A +  GG+G + E  + RH +     +   G+ +
Sbjct: 335 -------LISLMKRNNCGKALEIARHARDMHGGNGIMAEYHVMRHAQNLETVNTYEGTHD 387

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +L   + G   F
Sbjct: 388 VHAL-ILGRAQTGLQAF 403


>gi|163858099|ref|YP_001632397.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163261827|emb|CAP44129.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 388

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 129/359 (35%), Gaps = 39/359 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-----HLMSPSVTSASMVALMTT 167
            GL    +     P               +M +          +++ +     +++   T
Sbjct: 43  QGLAQFGYIGGQLPEADGGYDLDSINWGMMMEEAGYHWGSLRTIINITSIFLRLLSEHGT 102

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
            +    +   +              ++  A  + ++E   G+D+  I  + +   D    
Sbjct: 103 EQQKAKYMADVL-------------ESRKASCIAISEPNHGSDVGGIEFKAEDKGDHYLL 149

Query: 228 LSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                W  +   +D  I+LA+      +G+   F++ R             RL +K+  R
Sbjct: 150 NGSKLWITNGHYADYAIVLARTFSPSCDGKSSIFVIDRAETPFD------SRLVDKMVLR 203

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ T EL F++        L      +++M        L+ A+ +V   + +L  ++ YA
Sbjct: 204 ASGTSELTFADVKVPKSALLGTEGTALKEMLKGLNHGRLNIAMGAVGAAQAALDMSVEYA 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  + +  ++++ I D+ + + +A  L+++ A +    K    E         I
Sbjct: 264 KTRKQFGRPIGEFQLIQKHIVDMLIQVESARGLAYKAAAAVKAGKPARVE-------CSI 316

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K    + A  V   A+   GG GY  E  + R +R++    I  G+     L V   L
Sbjct: 317 AKLHAAEAAHNVARTAIAVHGGLGYSTEYGLERIFRDTSGGVIPEGTAEVQTLIVGREL 375


>gi|258655394|ref|YP_003204550.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258558619|gb|ACV81561.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 621

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/522 (19%), Positives = 181/522 (34%), Gaps = 88/522 (16%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L    E V S         A+ + P    Y P       V    ++    R  +      
Sbjct: 42  LHEF-EQVASGPVAASFVDADRHPPV---YDPATF---SVTLPESFKKSYRAIVDGQWDR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                         + +  AA L L A   A  + S      ++V    TP   +     
Sbjct: 95  LELPTELGGFGASPSLRWAAAELILGA-NPALFMYSGGPNFGAVVHRNGTPEQQQM---- 149

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                        M        + LTE   G+D+ A  ++  +  DG + L G K F++S
Sbjct: 150 ----------ARTMIDKQWGSTMVLTEPDAGSDVGAGRTKAVQQPDGTWHLEGVKRFITS 199

Query: 238 PMSD-----AFIMLAQVEG----------RVGCFLVPRLLED------GSPNGLCYQRLK 276
              D       ++LA+ EG           +  F+VP+ L D      G  NG+    ++
Sbjct: 200 AEQDLTENIVHLVLARPEGPGIESRPGTKGLSLFIVPKFLFDPATGELGERNGVFVTGVE 259

Query: 277 NKIGNRSNATVELEF----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           +K+G + + T EL F    S   G+LLG+ +     +  +     +     +++ +    
Sbjct: 260 HKMGLKVSTTCELSFGLNGSPAVGYLLGERHDGIAQMFQVIEYARMMVGTKAIATLSTGY 319

Query: 333 AEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             A+ YA+ R  S               +I  P ++R +           A+    A+  
Sbjct: 320 LNALDYAKTRVQSADLTRAADKTAPRVTIIHHPDVRRILMRQKAYAEGLRAVYLYTASWQ 379

Query: 381 DE---AKSRSEEAAYARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           D     +    E A A+     + PI K    + A   +A +++  GGSGY ++  I ++
Sbjct: 380 DRIAGGELGGGELAMAKHVNDLLLPIVKGVGSERAYENLALSLQVFGGSGYTQDYPIEQY 439

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493
            R++  +++  G+      D               F  + +D G++   + T +   +  
Sbjct: 440 IRDAKIDTLYEGTTAIQAQDF-------------FFRKIVKDGGAALGVIATEIATFVKT 486

Query: 494 CKEDKGLARFLTEKIALASSA--------AALYRAGMNDIAD 527
              +    RF  E++AL  +A         AL    M  + D
Sbjct: 487 SMPETRDGRFK-EELALLGTALADVQAMVGALVGYAMAAVQD 527


>gi|197103757|ref|YP_002129134.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196477177|gb|ACG76705.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 395

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 134/362 (37%), Gaps = 36/362 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      G         +    V   A+ + A  +  +       +   S      +
Sbjct: 57  REIMTEMGELGFLGPTLPEEYGCAGVNHVAYGLIAREIEAIDSGYRSAMSVQSSLVMYPI 116

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + + P              M   ++    GLTE  GG+D A++ +  +K+ 
Sbjct: 117 YAFGSEDQKRRFLPG-------------MAAGTIVGCFGLTEPDGGSDPASMRTTARKVD 163

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        W  +SP+SD  ++ A+++G++  FLV R        G    ++KNK+  R
Sbjct: 164 GGYVLNGAKMWITNSPISDVALVWAKLDGKIRGFLVER-----GTEGFETPQIKNKLSLR 218

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR 341
           ++ T E+  S+ F       ++    VE ++     L+ A   ++   +  AE   +A R
Sbjct: 219 ASVTGEIALSDAFVP----EDMMLPGVEGLRGPFSCLNKARYGIAWGAMGAAEFCLHASR 274

Query: 342 -----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R + G  L  + ++++ +AD+  +IA     +  L    DE        A+    
Sbjct: 275 DYVSSRSLFGRTLASRQLVQKKLADMQTEIALGFEGALALGRLIDEG-------AWVPEA 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L +  
Sbjct: 328 ISMLKRNNCGKALDIARVARDMHGGNGISGEYHVMRHASNLETVNTYEGAHDVHALILGR 387

Query: 457 LL 458
            +
Sbjct: 388 AI 389


>gi|72061173|ref|XP_785958.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
 gi|115965650|ref|XP_001177809.1| PREDICTED: similar to glutaryl-Coenzyme A dehydrogenase
           [Strongylocentrotus purpuratus]
          Length = 444

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 123/381 (32%), Gaps = 35/381 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P++      G  +D+  FH             G+            V   A+ + A  + 
Sbjct: 85  PRILMANRNGV-FDRDIFHE--------LGALGVLGPTIKGYGCAGVSSVAYGLLAREIE 135

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            +           S      +    T    + + P++ S E             +    G
Sbjct: 136 YVDSSYRSAFSVQSSLVMHPINEYGTEAQKEKYLPRLASGE-------------LIGAFG 182

Query: 202 LTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LTE   G+D A + ++      S          W  +SP++D F++  +     G   + 
Sbjct: 183 LTEPNHGSDPAGMETKAVYNPSSKTYTLNGAKSWITNSPIADVFVVWGKNHEEGGK--IR 240

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIY 317
             + +    GL    +  K   R++AT ++   +        L      G          
Sbjct: 241 GFILEKGMKGLSAPYIDGKFSLRASATGQIVMEDVEIPEENMLPNVKGLGGPFGCLNNAR 300

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A  ++      L  A  Y   R   G  L    +M++ +AD+  +I+       ++ 
Sbjct: 301 YGIAWGTLGAAEFCLETARQYTLDRVQFGSPLARNQLMQKKMADMLTEISLGLQSCIQVG 360

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+ K+  +       M  + K   C  +  +   A + +GG+G  +E  + RH    
Sbjct: 361 RLKDQGKATPD-------MISLIKRNSCGKSLDIARVARDMLGGNGICDEYHVIRHVMNL 413

Query: 438 PANSILLGSGNAMVLDVLNLL 458
            A +   G+ +   L +   +
Sbjct: 414 EAVNTYEGTHDIHALILGRAI 434


>gi|297158876|gb|ADI08588.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 608

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/536 (16%), Positives = 179/536 (33%), Gaps = 76/536 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              V  E+  L E        E    A+ N P    + P            ++    +  
Sbjct: 38  AKSVLSEISRLSE----NELAESYADADRNPPV---FDPKTH---TAPVPESFKKSYQAY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                   ++     A   L +             +  +    T  ++
Sbjct: 88  MDAEWWRLGVPEDLGGAACPRSLLWACAEQILGSNTPIWMYACGPSFAGVLYDEGTEEQL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                    +R                  + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 148 A-------IARHIVDKQWGA--------TMVLTEPDAGSDVGAGRTRAVRQEDGSWHIEG 192

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQ 273
            K F++S   D        +LA+ EG       +  F+VP+   D      G  NG    
Sbjct: 193 VKRFITSGEHDLSENIIHFVLARPEGAGPGTKGLSLFIVPKYDFDWETGELGERNGAYTT 252

Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +++K+G R + T EL F       G+LLG+ +     +  +     +     +++ +  
Sbjct: 253 NVEHKMGLRVSNTCELTFGADHPAKGWLLGEKHDGIRQMFKIIEFARMMVGTKAMATLST 312

Query: 331 SLAEAIHYARRRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA+ R                  +   P ++R++           +L    A+
Sbjct: 313 GYLNALDYAKERVQGPDLAAFTDKSAPRVTITHHPDVRRSLMAQKAYAEGLRSLVLYTAS 372

Query: 379 SFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             DE        +  S   A   ++ PI K +  + A   +A++++ IGGSGY++E  + 
Sbjct: 373 VQDEIQALEAAGEDTSAAHALNDLLLPIVKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSS--GKKVITIL 487
           ++ R++  +++  G+      D     ++         +   +++ L  +  G+++    
Sbjct: 433 QYIRDAKIDTLYEGTTAVQGQDYFFRKIVRDQGQALNVISEEIKKFLAEAGGGEELTAAR 492

Query: 488 RDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542
                   + +GL    LT+  A     A +Y+ G+N         R L       
Sbjct: 493 DALAKAAADLEGLVGTMLTDLAATQQDVATIYKVGLN-------ATRLLLASGDVF 541


>gi|126463715|ref|YP_001044829.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105379|gb|ABN78057.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 403

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 36/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           + +  PA    +      GL  +     +  +     ++ + A  +  +       +   
Sbjct: 56  EEQTDPAIFREMG---EMGLLGATVPEEYGGLGASYVSYGLIAREIERVDSGYRSMMSVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D A +
Sbjct: 113 SSLVMYPIYAYGSEDQRRRYLPGL-------------AKGELIGCFGLTEPDAGSDPAGM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K ++G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 160 KTVARKTAEGYVLSGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPK 217

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+                   VE +K     L+ A   +S   +  A
Sbjct: 218 IGGKLSLRASITGEIVMEGVEV----GEEALLPGVEGLKGPFGCLNRARYGISWGVLGAA 273

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +A R     R   G  L    + +  +A++  DIA     S R+    DEA +   
Sbjct: 274 EACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALGAQASLRVGRLLDEANA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M  I K   C  A      A +  GG+G  EE  + RH       +   G+ +
Sbjct: 331 ----APEMISIVKRSNCGKALEAARHARDMHGGNGIQEEFHVMRHMANLETVNTYEGTHD 386

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +   +      F
Sbjct: 387 VHALILGRAITGLQAFF 403


>gi|209963490|ref|YP_002296405.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
 gi|209956956|gb|ACI97592.1| glutaryl-CoA dehydrogenase [Rhodospirillum centenum SW]
          Length = 404

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 132/384 (34%), Gaps = 34/384 (8%)

Query: 88  GPGGERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
                R  +   H  +H  ++      GL     D      +    + + A  +  +   
Sbjct: 48  DRLMGRVLEAFRHEHFHREIMAEMGELGLLGVTIDGYGCAGLNHVCYGLVAREVERVDSG 107

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S      +    +    + W P + S              ++    GLTE  
Sbjct: 108 YRSAMSVQSSLVMHPIHAYGSEEQRQRWLPGLASG-------------TLVGCFGLTEPD 154

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D  ++ ++ +K++ G        W  +SP++D F++ A+ E       V     +  
Sbjct: 155 AGSDPGSMKTRARKVAGGWTLSGSKTWITNSPIADIFVVWAKDEAGDIRGWV----LEKG 210

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             GL   +++ K   R++ T  +     F     + N+  G          L+ A   ++
Sbjct: 211 MAGLSAPKIEGKFSLRASVTGMIMMDEVFVP---EENLLPGAKGLSGPFGCLNKARYGIA 267

Query: 327 GMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  AE   +A R     R + G  L    ++++ +AD+  +IA     +  L    D
Sbjct: 268 WGAMGAAEFCWHAARQYTLDRQMFGRPLAATQLIQKKLADMQTEIALGLQGALALGRMLD 327

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                     +A     + K   C  A  +   A +  GG+G  +E  + RH     A +
Sbjct: 328 AG-------TWAPEAISLMKRNNCGKALDIARVARDMHGGNGIADEYHVIRHVLNLEAVN 380

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLF 465
              G+ +   L +L   + G   F
Sbjct: 381 TYEGTHDVHAL-ILGRAQTGLQAF 403


>gi|159036184|ref|YP_001535437.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157915019|gb|ABV96446.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 386

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 115/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                A+ +    L          +      +   + 
Sbjct: 48  RELAREFGKLGLLGMHLTGYGCAGASAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P +   E                  GLTE   G+D A++ ++ ++  D
Sbjct: 108 RYGSAEQKQRWLPAMAHGE-------------AIGCFGLTEPDHGSDPASMATRARRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++ ++D  ++ A+ +  V  F VP         G+  + +++K+  R+
Sbjct: 155 DWVLHGTKMWITNASVADVAVIWARTDEGVCGFAVPM-----DTPGVTVREIRHKMSLRA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          ++   R  L  A+ YA  
Sbjct: 210 SVTGEISLDDVRLPAAARLPEAVGLKAPLGCLTEARHGIVWGALGAARDCLETALDYATG 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + +  +AD+A++      L+  L    D  + R  +         + K
Sbjct: 270 RTQFGRPLAAFQLTQAKLADMAVEWNKGYLLALHLGRLADARRLRPHQ-------VSVGK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   +  + RH     +     G+     L +   L
Sbjct: 323 LNNVREALAIARQCRTILGANGVSGDYPVMRHANNLESVLTYEGTSEIHQLVIGQRL 379


>gi|311113463|ref|YP_003984685.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
 gi|310944957|gb|ADP41251.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931]
          Length = 397

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 139/396 (35%), Gaps = 35/396 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
              EL R A       H   P    W++    P   ++ + +   G+        F    
Sbjct: 20  EDHELFREAVREF-VAHEITPHYPEWEQAHIMP--RSVWQAAGEAGVLGLAVPEEFGGAQ 76

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDP 185
                        L      G  ++  +        +    T    + W P++ S     
Sbjct: 77  LSDYEYQLVLTQELATVGGYGFALAVHLQQDLVLPYLLAYGTHEQKERWLPQMVSG---- 132

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
                     +      TE   G+D+ A  +   +  D  Y L+G K F+ S +S DA +
Sbjct: 133 ---------DLVSSCAFTEPGAGSDLRACRTSAVRDGD-SYLLNGQKTFIGSGISGDAAL 182

Query: 245 MLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           +LA+ +G   R           + S  G    R  +K+G R++ T EL F N       L
Sbjct: 183 VLARTDGSSERASEDSFSLFFVEKS-EGYTPGRQLDKMGIRASDTAELFFENVRVPAENL 241

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+L      ++       L  A  S    R +L   + Y + R V G  + D    +  
Sbjct: 242 IGELGQGLTYIKQHLPQARLAIAAASAVISRTTLNATLEYVKERKVFGSRVADFQNTRFE 301

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+  ++   +     R   +F+  +  +E+AA A       K +  + A  +    ++ 
Sbjct: 302 LANALMNTELSELYVARAIAAFNAGELTAEDAAKA-------KVFASEKACTITDRCLQL 354

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GG GYI E  +A+ +  +    I  G+   +   +
Sbjct: 355 FGGYGYINEHPVAQAFLAARLLPIFGGTNELLRDSI 390


>gi|294628581|ref|ZP_06707141.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292831914|gb|EFF90263.1| glutaryl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 398

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 127/406 (31%), Gaps = 37/406 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G        
Sbjct: 28  DLAVRDTVRGWA--ADRVLPHIAEWYERGEL-------PGIRELARELGAIGALGMSLTG 78

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   V    +    + W P + + E
Sbjct: 79  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGSEEQKQRWLPVMAAGE 138

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        V    GLTE   G+D AA+ +  ++            W  +  ++  
Sbjct: 139 -------------VIGCFGLTEPDHGSDPAAMRTHAKRDGSDWVLNGRKMWITNGSVAGV 185

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ AQ E  +  F VP         G     +K+K   R++ T EL   +        L
Sbjct: 186 AVVWAQTEDGIRGFAVPT-----DTPGFSAPEIKHKWSLRASVTSELVLDDVRLPADAVL 240

Query: 303 NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              TG    +  L          ++   R S   A+ YA+ R   G  +    + +  +A
Sbjct: 241 PEVTGLRGPLSCLSHARYGIVWGAMGAARSSFEAAVEYAKSREQFGRPIGGFQLTQAKLA 300

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+++     L+  L    D  + R E+ ++        K    + A  +   A   +G
Sbjct: 301 DMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIEICRTARTILG 353

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 354 ANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 398


>gi|210075529|ref|XP_501919.2| YALI0C16797p [Yarrowia lipolytica]
 gi|199425292|emb|CAG82239.2| YALI0C16797p [Yarrowia lipolytica]
          Length = 530

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/391 (21%), Positives = 146/391 (37%), Gaps = 30/391 (7%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  E WD+ +  P   +  + +R    G   + +    +    K A          + + 
Sbjct: 142 PFVEEWDEEKEVPKEIFQEMGKRGYLAGSLGTPYKELAKYTNVKPASVP-------IEEY 194

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKI-----FSREYDPTNKAP-MQKTSVAIGL 200
           +  H +  +       +   T  +   +   +     F++E       P +   S  I L
Sbjct: 195 DMFHELIITDEIMRAGSGGLTWNLLGGYCIGLPPVIKFAKEPLKERILPGLLDGSKRICL 254

Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEG-RVGCFL 257
            +TE   G+D+A IT+  +K  DG  Y ++G  KW  +   +D F +  +  G   G   
Sbjct: 255 CITEPDAGSDVANITTTAEKTPDGKFYIVNGIKKWITNGIWADYFTVAVRTGGPGSGMNG 314

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
           +  LL +    GL  +R+ N  G  S+ +  +   +       LLG  N     +     
Sbjct: 315 ISVLLLERGMEGLETRRM-NTQGMLSSGSTWVTMEDVKVPVENLLGKENKGFKVIMTNFN 373

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +   I +    RV   EA  YA +R   G  LI+ PV++  +A++A+ I +  A   
Sbjct: 374 HERVGIIIQANRASRVCYEEACKYAHKRKTFGKPLIEHPVIRAKLANMAIRIESTHAW-- 431

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAMECIGGSGYIE---ERS 429
            L N   + +   EE A  R+   I        +       EA +  GG  Y        
Sbjct: 432 -LENLVFQCQMFPEEEAMLRLGGAIAGCKAQATQTLELCAREASQIFGGLSYTRGGLGGK 490

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + R YRE  A +I  GS   M+   +    K
Sbjct: 491 VERLYREVRAYAIPGGSEEIMLDLAMRQALK 521


>gi|52841039|ref|YP_094838.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296824|ref|YP_123193.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris]
 gi|52628150|gb|AAU26891.1| acyl CoA dehydrogenase, short chain specific [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750609|emb|CAH12016.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris]
          Length = 567

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 29/413 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           + N P++  Y   G+R D+V  HPA+           L         + +++    K   
Sbjct: 71  DANLPKIEQYNAIGQRDDRVIHHPAYVRSGDIIYGSNL--------MQYLLKPGQMKKTL 122

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           +   L +         P   SA ++      RV   ++    +  Y      P    +  
Sbjct: 123 SLFLLSSHAGEAGHNCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------G 251
               LTE +GG+D+    ++        + +SG KWF S+  +D  +M A+ +       
Sbjct: 177 GAQFLTEIQGGSDVGTNATRANLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310
            +G FLVP  L+DGSPN    +RLK KIG R+ AT E++F     + +GD+       +E
Sbjct: 237 GLGLFLVPGRLDDGSPNHYYLRRLKQKIGTRTMATAEIDFEGALAYPMGDVAEGIHLVME 296

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           ++  L  + ++   +   R +   A +YA+ R      +I+ P++K ++A I  +  A  
Sbjct: 297 NVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLAML 356

Query: 371 ALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           A  F +A   DE  +  E      +    R +A I KY+  K +   I   ++ + G+G 
Sbjct: 357 ASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGNGT 416

Query: 425 IEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476
           IE   S+ R  R+        G+   + +  L  + K   + E   + L+Q L
Sbjct: 417 IENFSSLPRLLRDCIVCENWEGTHFTLWMQTLRDMHK-FAIDELFIAHLQQLL 468


>gi|221640794|ref|YP_002527056.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter
           sphaeroides KD131]
 gi|221161575|gb|ACM02555.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides
           KD131]
          Length = 403

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 36/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           + +  PA    +      GL  +     +  +     ++ + A  +  +       +   
Sbjct: 56  EEQTDPAIFREMG---EMGLLGATVPEEYGGLGASYVSYGLIAREIERVDSGYRSMMSVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D A +
Sbjct: 113 SSLVMYPIYAYGSEDQRRRYLPGL-------------AKGELIGCFGLTEPDAGSDPAGM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K ++G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 160 KTVARKTAEGYVLHGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPK 217

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+                   VE +K     L+ A   +S   +  A
Sbjct: 218 IGGKLSLRASITGEIVMEGVEV----GEEALLPGVEGLKGPFGCLNRARYGISWGVLGAA 273

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +A R     R   G  L    + +  +A++  DIA     S R+    DEA +   
Sbjct: 274 EACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALGAQASLRVGRLLDEANA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M  I K   C  A      A +  GG+G  EE  + RH       +   G+ +
Sbjct: 331 ----APEMISIVKRSNCGKALEAARHARDMHGGNGIQEEFHVMRHMANLETVNTYEGTHD 386

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +   +      F
Sbjct: 387 VHALILGRAITGLQAFF 403


>gi|145298895|ref|YP_001141736.1| acyl-CoA dehydrogenase family protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851667|gb|ABO89988.1| acyl-CoA dehydrogenase family protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 343

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 116/317 (36%), Gaps = 20/317 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RWD+    P     ++++   G         +  +   +           M     
Sbjct: 26  PHAARWDRDHEFPI--PTIKQAAALGFCGLYTPEQYGGLGLPRLDASLIFERLAMGCTST 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++     + M+       V ++W P++ S E             +     LTE   G
Sbjct: 84  TAYLTIHNMVSWMLGSWLPAAVAEEWVPRLASGE-------------LLGSYCLTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D AA+ ++  +  D  Y + G K F+S   S   +++    G  G   +   +     +
Sbjct: 131 SDAAALKTRAVRDGDD-YLIDGSKVFISGAGSTDVLVVMARTGGDGAKGISAFMVPADSD 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+ Y + + K+G  S  T E+ F+       + LG                 ++ A  SV
Sbjct: 190 GIVYGKAEEKMGWNSQPTREVAFNGVRIPASYRLGQEGEGFKFAMQALDGGRINIATCSV 249

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L +A+ Y ++R   G  + +   ++  +AD+A ++AAA  +  + A+  D    
Sbjct: 250 GTAQQALDDALRYVQQRQQFGHPISEFQSVQFRLADMATELAAARLMVRQAADKLDRGSP 309

Query: 386 R-SEEAAYARIMAPITK 401
             S   A A+  A    
Sbjct: 310 DKSAWCAMAKRFATDVM 326


>gi|229491731|ref|ZP_04385552.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321412|gb|EEN87212.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 611

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/543 (17%), Positives = 189/543 (34%), Gaps = 78/543 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  +        A   A  A+ N      +         V         +      G   
Sbjct: 42  LAEVARLAEGPVAASFA-DADRNP---VEFDAPNH---AVVVPEPLRKTVEAVNEAGWSR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    V    A  + A    L+A   +    +     AS++  +      K WA +
Sbjct: 95  LGLPEGMGGVPAP-APLVWAIGEMLVAANGSASFFNMGPLMASVLYTIGN-EQQKHWAKE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
            F R +  T             + LTE   G+D+ A  ++     DG + + G K F+S 
Sbjct: 153 GFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEGVKRFISG 199

Query: 238 PMSDA------FIMLAQVEG------RVGCFLVPR------LLEDGSPNGLCYQRLKNKI 279
                       ++LA+ EG       +  F VP+       LE G  NG+    +++K+
Sbjct: 200 GDVGGTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSETLELGERNGVYVTGVEHKM 259

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+GD++     +  +     +     +   +      A
Sbjct: 260 GLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMVGTKATGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R                  +   P ++R++A          A+    A   +  
Sbjct: 320 LQYAKERIQGADLTELTNKTAPRVAITHHPDVRRSLAMQKAYAEGLRAVYLYTAAHQNAD 379

Query: 384 KSRSEEAAYARIMA-------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            +     A A + A       PI K    + A  ++ E+++ +GGSGY+++  I ++ R+
Sbjct: 380 VAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTLGGSGYLQDYPIEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL---NLLEKGTNLFE---QLFSTLEQDLGSSGKKVITILRDS 490
           +  +++  G+      D        ++G  L     ++   ++ + G+   K   +L ++
Sbjct: 440 AKIDTLYEGTTAIQAQDFFFRKIARDRGVALAHVAGRIREFIDSEAGNGRLKAERVLLET 499

Query: 491 ISLCKEDKGLARFLTEK-IALASSAAALYRAGMN------DIADVFLENRFLDNCHSTHC 543
                + + +A  LT   +A     + LY+ G+        + D+ +  R L        
Sbjct: 500 --ALTDVQEMAGTLTGYLMASQDQPSELYKIGLGSVRFLYAVGDLLIGWRLLVQAEVALA 557

Query: 544 MLH 546
            L 
Sbjct: 558 ALD 560


>gi|296138171|ref|YP_003645414.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296026305|gb|ADG77075.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 610

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 96/523 (18%), Positives = 188/523 (35%), Gaps = 75/523 (14%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
               + L           A+  A  A+ N P    + P      + + + A+        
Sbjct: 36  DTAKEMLREAARQAEGPIAESFAE-ADRNPPV---FDPETH---EAKINEAFKKSQAIFA 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G      +         ++       L+L A      + +     A ++    T    
Sbjct: 89  DGGWAYLGLNDELGGTDVPRSLYWGIGELFLGA-NPPIFMFAAGPGFAQILFDEGTDEQK 147

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           K WA     R ++ T             + LTE   G+D+ A  ++  K  DG + + G 
Sbjct: 148 K-WAKIAAERNWNAT-------------MVLTEPDAGSDVGAGRTKAIKQEDGSWHIEGV 193

Query: 232 KWFLSSPMSDA------FIMLAQVEGRV------GCFLVPRLLED-----GSPNGLCYQR 274
           K F++S   D        ++LA+ EG        G + VP+   D     G  NG     
Sbjct: 194 KRFITSATVDDMFESTFHLVLARPEGGAPGTKGLGLYFVPKYHFDEDGNLGEHNGAFVTN 253

Query: 275 LKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +++K+G +++ T EL F        G+L+G+       +  +     +     ++  +  
Sbjct: 254 VEHKMGIKTSTTCELTFGGHGIPAKGWLVGEEIKGIAQMFKVIEHARMMVGTKAIGTLST 313

Query: 331 SLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               A+ YA++R                  +   P ++R++           A+    A 
Sbjct: 314 GYLNALDYAKQRVQGADLTQMADKTAPRVTITHHPDVRRSLLTQKAYAEGLRAVYLYTAA 373

Query: 379 SFDEAKSRSEEAA---YARI----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSI 430
             D   +     A    A      + PI K    + A  ++  E+++  GGSG++++  I
Sbjct: 374 HQDVRTATPVSGADEEMAYKVNDLLLPIVKGVGSERAFTLLGTESLQTFGGSGFLQDYPI 433

Query: 431 ARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL---FEQLFSTLEQDLGSSGKKVI 484
            ++ R+S  +S+  G+      D      L ++G  L     ++   +E + G +    I
Sbjct: 434 EQYVRDSKIDSLYEGTTAIQAQDFFFRKILRDRGAALGHVAGEITKFIEANAGGAFAADI 493

Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSA--AALYRAGMNDI 525
            +L+ +    ++ + +A  LT   ALAS      LY+ G+  +
Sbjct: 494 ALLKTA---TEDVQAMAATLTGF-ALASQQEPKELYKVGLGSV 532


>gi|254469328|ref|ZP_05082733.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211961163|gb|EEA96358.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 404

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/304 (20%), Positives = 110/304 (36%), Gaps = 30/304 (9%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++L  TP   + W  K              +         LTE   G+D+A I     +
Sbjct: 100 AISLFGTPEQQQQWLNK-------------TRAGQTLSAFALTEPDSGSDVANIELSAIR 146

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++  +++ A+     G   +   +      GL  +   + + 
Sbjct: 147 DGDDYVLNGEKTWISNGGIAGLYVVFARTGEAPGAKGISAFIVPADTPGLTIEERLDVMA 206

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAE 334
                   L F       +   N   G  E  KI +             ++   R +L E
Sbjct: 207 PH--PLARLGFKQ---LRIPAANRIGGAGEGFKISMSVLDVFRCTVGAAALGFARRALEE 261

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+  A  R +  G+L D  +++  +A++A+DI A+  L +R A + D        AA   
Sbjct: 262 AVARATTRKLGDGVLADMQMVQGHLAEMAIDIDASALLIYRAAWTKDMG------AARVS 315

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K +    A  +I +A++  GG G     ++ + YRE  A  I  G+ +   + V
Sbjct: 316 REAAMAKQFATDQAQQIIDKAVQIHGGEGVRSGNTVEKLYREIRALRIYEGASDVQKIIV 375

Query: 455 LNLL 458
              L
Sbjct: 376 ARQL 379


>gi|154275546|ref|XP_001538624.1| hypothetical protein HCAG_06229 [Ajellomyces capsulatus NAm1]
 gi|150415064|gb|EDN10426.1| hypothetical protein HCAG_06229 [Ajellomyces capsulatus NAm1]
          Length = 468

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 141/405 (34%), Gaps = 25/405 (6%)

Query: 79  YNTPQLHAY-------GPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVR 129
              PQL             G  WD+ +  P   +  +  R    GL    +D +      
Sbjct: 67  QYGPQLKVREWVEAEIDLNGHEWDEGKTVPEHLYKQMGERGYLAGLMGVAYDPALSRNHV 126

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTN 187
           K          + +   +     +      +++       P V K    ++ +R      
Sbjct: 127 KCVPPESWDFFHELIVTDELSRAASGGLVWNLIGGFGIGCPPVIKYGKKELVNR-----I 181

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML 246
              +      I L +TE   G+D++ I+ + +   DG  Y ++G K ++++ +   +   
Sbjct: 182 LPGILAGDKRICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTT 241

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLN 303
           A   G  G   +  LL + S  G+  +++ +  G  ++ T  + F +       L+G  N
Sbjct: 242 AVRTGEPGMNGISVLLIERSAGGVGTRKM-DCQGMATSGTTYVTFEDVKVPVENLIGKEN 300

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                +        +   I  V   RV   E++ YA +R   G  LID PV++  +A +A
Sbjct: 301 QGFKVIMMNFNHERMGIIIQCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHMA 360

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
             I A+      L     ++   +E A          K            EA +  GG  
Sbjct: 361 RHIEASHNWLENLVFQC-QSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 419

Query: 424 YIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           Y        I R YR+  A +I  GS   M+   +    K    F
Sbjct: 420 YTRGGQGGKIERLYRDVRAYAIPGGSEEIMLDLSMRQSLKVHQFF 464


>gi|282864441|ref|ZP_06273497.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282560928|gb|EFB66474.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 402

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 124/406 (30%), Gaps = 32/406 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G        
Sbjct: 27  DLAIRDTVRTWA--ADRVLPHIAEWYEKGEL-------PGIRDLARELGALGALGMSLQG 77

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   +    +    + W P + + E
Sbjct: 78  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQRWLPGMAAGE 137

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G+D A + +  ++            W  +  ++  
Sbjct: 138 -------------TIGCFGLTEPDHGSDPAGMRTYAERDGTDWILTGRKMWITNGSVAGV 184

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +   G   +   +      G     +++K   R++ T EL            L
Sbjct: 185 AVVWARTDETAGGSGIRGFVVPTDTPGFSAPEIRHKWSLRASVTSELVLDGVRLPADAVL 244

Query: 303 NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             +TG    +  L          ++   R S   A+ YAR R   G  +    + +  +A
Sbjct: 245 PEATGLRGPLSCLSHARYGIVWGAMGAARASFEAAVDYARTREQFGRPIGGFQLTQAKLA 304

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+++     L+  L    D  + R E+ ++        K    + A  +   +   +G
Sbjct: 305 DMAVELHKGILLAHHLGRRLDAGRLRPEQVSFG-------KLNNVREAIEICRTSRTILG 357

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 358 ANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 402


>gi|268317526|ref|YP_003291245.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335060|gb|ACY48857.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM
           4252]
          Length = 673

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 166/486 (34%), Gaps = 56/486 (11%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
            N +        L+  +P    +E E     +        A + N +   L         
Sbjct: 36  KNLFWG-RFREDLVFPYPEESKEEREKCDALLAELE----AYLKNEHPSIL--------- 81

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+ ++ P W  +L R    G+        +  +        R   L          ++S
Sbjct: 82  IDQEQYIPDW--VLERLFEMGVMGLTIPEEYGGLGLGVTSYNRVLELIGRYCASTAVVVS 139

Query: 154 PSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     + L  T    + + P              +          L+E   G+D A
Sbjct: 140 AHQSIGCKAIMLFGTEEQKRKYLP--------------IVAREKLAAFCLSEPNVGSDAA 185

Query: 213 AITSQGQKISDGIY--CLSGHKWFLSSPMSDAFIMLAQ---VEGRVGC--FLVPRLLEDG 265
              ++ +   DG Y       KW  S  ++    ++A+      + G     V  L+   
Sbjct: 186 GQQTRCELSEDGTYYILNGEKKWSTSGALAGVLTVMAKQRLKNPKTGKEEDRVTALIVTP 245

Query: 266 SPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
              G+  +++ ++K G R      + F+N        L      +     L  L+    +
Sbjct: 246 DMEGVDVFEKNRSKAGIRGTWQARIRFTNVKVPRENLLYKEGKGLN--VALSCLNYGRCT 303

Query: 325 V-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +      G   ++ ++  +A+ R+  G  L D   +++ IA +A       A+ + +   
Sbjct: 304 LSAGVLGGATWAMEQSTKWAQTRYQFGRPLADFEAVQQKIAKMAALTYGMRAMLYMVTGM 363

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D             I     K +C +M   VI EAM+ +GG GY+ E  + R +R+   
Sbjct: 364 LDRQDKDI------MIETAAAKVFCSQMGWEVIDEAMQIMGGEGYMTENELERVWRDHRI 417

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDK 498
           + I+ G+   M   +      G  L EQ+ + ++Q LG    +  +  L+  +S     +
Sbjct: 418 HRIVEGANEVMQSYIFAY--GGKQLAEQMLA-IKQALGWDRDQSPVENLQRIVSNAFNPR 474

Query: 499 GLARFL 504
            L R L
Sbjct: 475 LLKRAL 480


>gi|300691454|ref|YP_003752449.1| acyl-coA dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299078514|emb|CBJ51169.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 625

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/510 (18%), Positives = 180/510 (35%), Gaps = 91/510 (17%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHIIPEVRTALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP                 T   P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQ-------------IETFVQPELEGRFYGTMCLSEPQAGSSLSDIVT 178

Query: 217 QGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +          Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGESPLGAQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGVKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L       G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVGADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGPDGQPRAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +   + +          A+ YAR R   G          
Sbjct: 299 YLVGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPVGPAGKDA 357

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYAR----- 394
                 ++D   ++R +      +  A  L+   A   DE   A S  + AA AR     
Sbjct: 358 ASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGAASEGDAAARARLGLLL 417

Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            I+ PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD
Sbjct: 418 DILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLD 477

Query: 454 VLN--LLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRDSISLCKEDKGLARFLTE-- 506
           +L   ++ +    F  L   ++  +G    SG + +     ++ +    +GLA+   +  
Sbjct: 478 LLGRKVVMQDGAAFAALGQRVQATVGRALDSGDEALAGWGRALGMA--AQGLAKVTQQLW 535

Query: 507 -----KIALASSAAALYRAGMNDIADVFLE 531
                ++ LA+++  L   G   IA ++LE
Sbjct: 536 AAGDPRVTLANASVYLEAFGHVVIAWIWLE 565


>gi|294507110|ref|YP_003571168.1| Acyl-CoA dehydrogenases [Salinibacter ruber M8]
 gi|294343438|emb|CBH24216.1| Acyl-CoA dehydrogenases [Salinibacter ruber M8]
          Length = 415

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 135/430 (31%), Gaps = 54/430 (12%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P +F   + Y     L AL++     V   +      V++              P +  Y
Sbjct: 26  PTVFDPPDFYD----LEALLSEEARHVRDNV----RTVVTEEVM----------PIIEKY 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
              GE        P    L+      GL  S     +        A+ +    L      
Sbjct: 68  AQRGE-------FP--RHLISTFAEHGLLGSTLPPEYGGEGHSNIAYGLIMQELERGDSG 118

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                          +    +    + W P + S E                  GLTE  
Sbjct: 119 LRSFCSVTGALVMYPIWQYGSDAQRERWLPALASGE-------------AIGCFGLTEPD 165

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G++ A + ++ ++  DG       +W  ++ ++D  ++ A+ E       V   L +  
Sbjct: 166 VGSNPAEMQTRARRDGDGWVIDGQKRWSTNATIADVAVIWAKDEDDT----VRGFLVETD 221

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMS 324
            +G+    + +    R+  T E+   +        L   +G    +  L          +
Sbjct: 222 RDGVETPPIDDSWSLRAAVTSEVVLDDVRVPDAARLPEVSGLKGPLSCLTQARYGICWGT 281

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +         A  +A+ R   GG +    +M+  + D+  +I  A  L++RL    +   
Sbjct: 282 IGAAMACFDTARQHAQNREQFGGPIGRFQLMQERLVDMVQEITKAQLLNWRLGTLKEAGT 341

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R ++ + A+          C+ A  V   A + +GG+G      + RH     +     
Sbjct: 342 MRPQQVSLAKR-------NNCQTALDVARSARQVLGGNGVTSMYPVMRHMNNLESVVTYE 394

Query: 445 GSGNAMVLDV 454
           G+     L V
Sbjct: 395 GTHEVHTLIV 404


>gi|83747055|ref|ZP_00944100.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|207738492|ref|YP_002256885.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
 gi|83726332|gb|EAP73465.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia
           solanacearum UW551]
 gi|206591860|emb|CAQ58766.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609]
          Length = 400

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 119/316 (37%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++L  TP   + +  ++   E                   L+E   
Sbjct: 91  ADFAFAMQGLGSGAISLQGTPAQRERYLTQVARGE-------------AIAAFALSEPDA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    +   DG        W  +  ++D +++ A+     G   +   + +   
Sbjct: 138 GSDVAALACAARVDGDGYVLDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVEAGT 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMS 324
            G       + I         L F+         +     G    M+ L       A  +
Sbjct: 198 PGFEIAERIDVIAPH--PLARLRFTGCRIPAAQRVGAAGEGFKVAMRTLDVFRTSVAAAA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+  A  R +  G+L D  + +  +A +A  I +A  L++R A   D+ +
Sbjct: 256 LGFARRALDEALARATTRRMFNGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGR 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A++ A        + A  VI  A++  GG G + E+ + R YRE  A  I  
Sbjct: 316 SVTREAAMAKMTA-------TENAQQVIDAAVQMWGGLGVVSEQPVERLYREIRALRIYE 368

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L +
Sbjct: 369 GATEVQQLIIARDLLR 384


>gi|296170671|ref|ZP_06852246.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894660|gb|EFG74394.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 608

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/557 (16%), Positives = 195/557 (35%), Gaps = 66/557 (11%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY---GPGGERWDKVEF 99
           L  ++     +       L E        E AR+A    P    +         +D  E 
Sbjct: 15  LFEVLGVGAVLGDGHYSDLDEETARTILAEAARLAE--GPVAETFASADRNPPVFDPAEH 72

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
             +    L +++    H       +  ++ +Q   + A      A  E     +PS    
Sbjct: 73  SISVPEELAKTV----HAIKEAGWWRLMLDEQIGGMAAPPPLAWAVNEMIICANPSANFF 128

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            +  LM      +         E      A   +   A  + LTE   G+D+ A  ++  
Sbjct: 129 CLGPLMAQALYVE-------GNEEQRRWAAEGVERGWAATMVLTEPDAGSDVGAGRAKAI 181

Query: 220 KISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLLED--- 264
           +  DG + + G K F+S             ++LA+ EG       +  F VP+ L D   
Sbjct: 182 EQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPGTKGLSLFYVPKFLFDPET 241

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY 317
              G  NG+    L++K+G +S+ T E+ F        G+L+GD++     +  +     
Sbjct: 242 FELGPRNGVFATGLEHKMGIKSSPTCEMTFGATDVPAVGYLVGDVHNGIAQMFTVIEHAR 301

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALD 365
           +   + +   +      A+ +A+ R                  ++  P ++R++      
Sbjct: 302 MTIGVKAAGTLSTGYLNALAFAKERVQGADLTQMADKTAPRVTIMHHPDVRRSLMTQKAY 361

Query: 366 IAAATALSFRLANSFDEAKSRS---EEAAYARI----MAPITKYWCCKMAPAVIAEAMEC 418
                AL    A   D+  ++     +   A      + PI K    + A  V+ E+++ 
Sbjct: 362 AEGLRALYMYAAAHQDDTVAQHVSRADHEMAHRVDDLLLPIVKGVSSERAYEVLTESLQT 421

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476
           +GGSG++++  + ++ R++  +S+  G+     LD     ++       + + + +   +
Sbjct: 422 LGGSGFLQDYPLEQYIRDAKIDSLYEGTTAIQALDFFFRKIVRDRGQALQFVTAQITATI 481

Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMN------DIADVF 529
               + +        +   E   +   LT  +  A+     +Y+ G+        + D+ 
Sbjct: 482 DGCDEALKPQAELLQTALDEVTAMTGALTGYLMSAAQHPTEIYKVGLGSVRYLLAVGDLL 541

Query: 530 LENRFLDNCHSTHCMLH 546
           +  R L      H  L 
Sbjct: 542 IGWRLLVQAGVAHAALA 558


>gi|330835650|ref|YP_004410378.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567789|gb|AEB95894.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 398

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 124/380 (32%), Gaps = 39/380 (10%)

Query: 91  GERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           GER  D +E       L       GL+       +          + A            
Sbjct: 41  GERKGDLLEVREKIKEL-------GLNGLDVSEEYGGASGDYLSLLVATEEMSRVWPSLS 93

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                +    S +    +  + + +               P+ +         TE   GT
Sbjct: 94  TFFLINWMFTSAILRFGSEDLKERYV-------------VPVARGERIAAFANTEPGAGT 140

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG--RVGCFLVPRLLEDGS 266
           D+A ITS   K  +G Y ++G K F+++   +D  I+ A+           +   + + +
Sbjct: 141 DVAGITSVA-KEINGNYVINGRKIFITNGDLADYIILTARTSPISEPRWKGITMFIIERN 199

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G   +   +  G +++ T E+  +          NV     E  K  +   D A   V
Sbjct: 200 YEGFKVEGRIDTTGLKASHTTEISLNEVKVP---KENVVGKVGEGFKYAVSSFDYARTIV 256

Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + +A+A     I Y+  R   G  +    ++++ +++   D+  +  L +     F
Sbjct: 257 AAQALGIAQAALEKMISYSLERKSFGQSIASFQMVQQKVSESMADVITSRLLVYWAGTLF 316

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                   E   A   A + K++  + A  V+  AM   GG G      + R  R+    
Sbjct: 317 KNKMEN--EYVMA---ASLAKFFATESAEKVVLRAMTAHGGYGVTTSTGLERMLRDVQIL 371

Query: 441 SILLGSGNAMVLDVLNLLEK 460
               G+ +   +       +
Sbjct: 372 KTYEGTNDIQRISAARHFYR 391


>gi|312796678|ref|YP_004029600.1| isovaleryl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454]
 gi|312168453|emb|CBW75456.1| Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) [Burkholderia
           rhizoxinica HKI 454]
          Length = 381

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 133/402 (33%), Gaps = 37/402 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              L   A   AR       QL            +     W    RR    GL       
Sbjct: 9   RIALREQAARFARD------QLST-DIAASDRASIFHRDGW----RRCAEFGLFSMALPE 57

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMTTPRVHKDWAPKIF 179
                    +  +           + G L S +    ++   +A+  TP     + P + 
Sbjct: 58  DRGGAGAPLSDLLAVMEGLGYGSEDLGLLFSLNAHLWTVALPLAIHGTPTQRSRFLPGL- 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                          S+      TE   G+D+ ++ +Q  +  D         +  ++P+
Sbjct: 117 ------------MDGSLIGANASTEDEAGSDVFSMRTQAIRDGDSYVLNGSKTYITNAPI 164

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A ++  +G   V   L + +  GL       K+G R+     +   +      
Sbjct: 165 ADLCVVYATIDPTLGPLGVTAFLVETTNPGLELSPPLEKMGLRTAQMGRITLKDCRVPAD 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L      V+  +  +  +   +   ++  MR  L   I +AR R   G  +     + 
Sbjct: 225 AILGREGRGVKVFESAMEYERGCILATTLGAMRRHLEACITHARTRRQFGQPIGKHQAVS 284

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+ +++ AA  L +R+    D  K  + EAA         K +  +       +A+
Sbjct: 285 HRLADMKVNLDAACELVYRVGRLKDAGKDATLEAA-------CAKLFVSEAYTKFSIDAL 337

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              G  GY+ E S  R  R++ A+ +  G+ +     +   L
Sbjct: 338 RIYGAQGYLAETSTERGLRDAIASLLYSGTSDIQRNIIATEL 379


>gi|254822320|ref|ZP_05227321.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium
           intracellulare ATCC 13950]
          Length = 246

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 14/241 (5%)

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L G K F+S   + D ++++A+  G  G   +   + +    GL +  L+ K+G  
Sbjct: 1   GDYVLDGVKQFISGAGASDVYVVMARTGGE-GPRGISAFIVEKDSAGLSFGALEEKMGWH 59

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
           +  T ++            L  + G      I +       L+ A  S+ G + +  +A 
Sbjct: 60  AQPTAQVILEGVRVPADAMLGGADGEGAGFGIAMNGLNGGRLNIAACSLGGAQAAADKAG 119

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y R R   G  L+D+P ++ A+AD+A  +  +  + +R AN+ D       E      +
Sbjct: 120 AYVRDRQAFGKSLLDEPTIRFALADMATGLETSRMMLWRAANALDTDDPDKVE------L 173

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K +       V  +A++  GG GY+ E  + +  R+   + IL G+   M + +  
Sbjct: 174 CAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLRVHRILEGTNEIMRVVIGR 233

Query: 457 L 457
            
Sbjct: 234 A 234


>gi|260574800|ref|ZP_05842802.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259022805|gb|EEW26099.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 387

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 129/389 (33%), Gaps = 33/389 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L+ +    ER   +        +  ++I  GL+ +                +   +   
Sbjct: 23  ELYPHEAMVERTGHLPM-EVIREVQAKAIAAGLYAANMPEEVGGAGLDTLTWLLYEKELG 81

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A           V   S + L  T    + +               P  +      L +
Sbjct: 82  RANYALHWTC---VARPSNILLAGTAEQRERYL-------------LPCVRGEKWDCLAM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFL 257
           TE   G+D+  + +  +    G + L+G K F+S    +D  I+          R     
Sbjct: 126 TEPGAGSDLRGMKATARLEG-GDWVLNGTKHFISHADLADFAIVFMASGEEDTPRGRKKR 184

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314
           +     D    G   +     + +R      LEF N       +LG+ +           
Sbjct: 185 ITAFFVDKGTPGFTVRDGYRNVSHRGYTNAILEFDNCRLPAAQVLGEAHKGFDVANTWLG 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A   +     +L  AI YA  R   G  +     +   +AD+A+++ AA  L+ 
Sbjct: 245 ATRLQVASTCLGRAERALGLAISYAAERRQFGQQIGKFQGVSFKLADMAMELKAAELLTR 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A  FD+      + + A++ A        ++   V  EA++  GG G ++E  + R +
Sbjct: 305 EAAWKFDQGTVTEADMSMAKLKA-------TEVLAMVADEAIQIHGGMGLMDELPLERIW 357

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTN 463
           R++    I  G+       +   L +  +
Sbjct: 358 RDARVERIWEGTSEIQRHIISRELLRAVD 386


>gi|99082284|ref|YP_614438.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
 gi|99038564|gb|ABF65176.1| Isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040]
          Length = 567

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 138/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A     +       +  G L + S  +A ++  
Sbjct: 218 DVIEELAEMGVFGLTIPEEFGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELILA 277

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PKI S E  PT                TE   G+D+ ++ ++  K + G
Sbjct: 278 GGTDAQKQQWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDAAG 324

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 325 DYQITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKTPGTDETPFPTEGMTGG 384

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G+       + +      + +A  ++   +
Sbjct: 385 EIE-VLGYRGMKEYELGFDGFHVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQ 443

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI+ P +   +A +A+++  A  L++  A   D       E
Sbjct: 444 SALDIAMQYAQDRKQFGKALINFPRVSSKLAMMAVEVMVARQLTYFSAWEKDNGHRCDLE 503

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 504 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 556

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 557 QAQVIARRL 565


>gi|289756310|ref|ZP_06515688.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium
           tuberculosis EAS054]
 gi|289696897|gb|EFD64326.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium
           tuberculosis EAS054]
          Length = 537

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                A  + +     A ++  + T    K WA     R +  T             + L
Sbjct: 45  WGANPAVWMYAGGAGFAQILYHLGTEEQKK-WAVLAAERGWGST-------------MVL 90

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG----- 251
           TE   G+D+ A  ++  + +DG + + G K F++S  S         ++LA+ EG     
Sbjct: 91  TEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPGT 150

Query: 252 -RVGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300
             +  + VP+ L      E G  NG+    +++K+G + +AT EL F        G+L+G
Sbjct: 151 KGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLVG 210

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348
           +++     + ++     +     +++ +      A+ YA+ R                  
Sbjct: 211 EVHNGIAQMFEVIEQARMMVGTKAIATLSTGYLNALQYAKSRVQGADLTQMTDKTAPRVT 270

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYARI----MAPITK 401
           +   P ++R++           AL    A   D A +      +A  A      M P+ K
Sbjct: 271 ITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDLMLPVVK 330

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLE 459
               + A A + E+++ +GGSG++++  I ++ R++  +S+  G+      D     ++ 
Sbjct: 331 GVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVR 390

Query: 460 KGTNLFEQLFSTLEQ--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS-AAA 516
                   +   +++  D G+   ++ T          + +G+A  LT  +  A     +
Sbjct: 391 DKGVALAHVSGQIQEFVDSGAGNGRLKTERALLAKALTDVQGMAAALTGYLMAAQQDVTS 450

Query: 517 LYRAGMNDI 525
           LY+ G+  +
Sbjct: 451 LYKVGLGSV 459


>gi|295839022|ref|ZP_06825955.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
 gi|197697636|gb|EDY44569.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SPB74]
          Length = 395

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 113/369 (30%), Gaps = 33/369 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R     GL     +           + +    L          +      +  
Sbjct: 54  PGVRELARELGSLGLLGMHLEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMY 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    ++W P++ + E                  GLTE   G+D   + ++ ++
Sbjct: 114 AIHRFGSEEQKREWLPRMAAGE-------------AIGCFGLTEPDHGSDPGGMRTRARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++   ++ A+ E  V  F+VP         G     L +K  
Sbjct: 161 DGSDWVLDGRKMWITNGSVASVAVVWARTEEGVRGFVVPA-----DTPGFSAPPLAHKGS 215

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEA 335
            R++ T EL            L   TG       L  L+ A   +        R     A
Sbjct: 216 LRASVTSELLLDGVRLPADAVLPGVTGLR---GPLSCLNEARYGILWGALGAARTCFRTA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  L    + +  +AD+A+++   T L+  L    D    R E+      
Sbjct: 273 LAYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQ------ 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K      A  +   +   +G +G   E  + RH     +     G+     L + 
Sbjct: 327 -VSLGKLNNVNKALEIARSSRTILGANGISFEFPVMRHMANLESVLTYEGTAEMHTLMIG 385

Query: 456 NLLEKGTNL 464
             L   + L
Sbjct: 386 QALTGESAL 394


>gi|294895324|ref|XP_002775135.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239881088|gb|EER06951.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 664

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 11/299 (3%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
               I L +TE   G+D+A I    +K S G  Y ++G K ++++ +   +  +A   G 
Sbjct: 12  GEKIICLAITEPTAGSDVANIRCSAKKSSCGKYYIVNGEKKWITNGIWADYFTVAVRTGG 71

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
            G   +  LL + +  G+  +R+K   G  S+ T  + F +       L+G  N     +
Sbjct: 72  PGMDGISLLLIEKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKVPIENLIGKENKGFKCI 130

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   L    ++    RV   EA+ +A +R   G  L+  PV++  + ++A  I A 
Sbjct: 131 MHNFNHERLALCALTNRFARVCYEEALKHANKRKTFGKNLVQHPVIRFKLGEMARQIEAT 190

Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
            A   ++A           EA      +  + K  C K+      E+ +  GG  Y    
Sbjct: 191 HAWVEQVAYQV--GTMHPLEANMKLGGVTALLKVQCTKVFEYCARESAQIFGGLSYSRGG 248

Query: 429 ---SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484
               + R  RE  A ++  GS   M+   +  + K   + + L    EQ+  ++ K++ 
Sbjct: 249 VGEKVERLNREVRAMAVPGGSEEIMLDLGVKQMSKLAEMAKVLVEQAEQENAANKKQMA 307



 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 33/391 (8%)

Query: 3   LREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLG 62
           + +  +  A N+          +N   +F   NA+       A  + F +  HK+L    
Sbjct: 292 VEQAEQENAANKKQMAMARSMGVNT-DVFGDANAFGDPYWYQAGNSPFYNESHKKLREYV 350

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +                       P    WD+    P    + RR    GL       
Sbjct: 351 RDLFEKEVL-----------------PHVFEWDENLEIP--REVHRRMGALGLTSLAMGH 391

Query: 123 SFEPVVRKQAHKIRAARLYLMAQL--EAGHLMSPSVTSASMVALMTTPRV--HKDWAPKI 178
            +          +   ++ +  +L          S   A  +    T  +     + PK 
Sbjct: 392 PYPVQYGSIPKFLDGVKIDVFHELIVSDELCRCGSGGVAWGLVGGLTIGLPPVLRFGPKA 451

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS 237
                 P            I L +TE   G+D+A I    +K S G  Y ++G K ++++
Sbjct: 452 MRDRIVPE----CLSGEKIICLAITEPTAGSDVANIRCSAKKSSCGKYYIVNGEKKWITN 507

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            +   +  +A   G  G   +  LL + +  G+  +R+K   G  S+ T  + F +    
Sbjct: 508 GIWADYFTVAVRTGGPGMDGISLLLIEKTMPGVTTRRMKCS-GVWSSGTTFISFDDVKVP 566

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              L+G  N     +              +    RV   EA+ +A RR   G  LI   V
Sbjct: 567 IENLIGKENKGFKCIMHNFNHERFALCAQTNRFARVCYEEALKHAHRRKTFGRPLIQHQV 626

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS 385
           ++  +A+++  I A  A    +A        
Sbjct: 627 IRWKLAEMSRLIEATHAWLENVAYQLSTMHP 657


>gi|297263698|ref|XP_002798848.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial [Macaca mulatta]
          Length = 408

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/383 (19%), Positives = 128/383 (33%), Gaps = 44/383 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK +  PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEQLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLT 203
           G +MS + +      L   +    + W     S +           P           L 
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPEPSLLGPTGPIFALG 172

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +        A T            +SG                      +    +   L 
Sbjct: 173 QVGCPCPSPAATEVFT-FPRSWQRVSGL--------------------ELPREGISAFLV 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
                GL   + ++K+G R ++T  L F +          +   P    KI +  LD   
Sbjct: 212 PMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGR 268

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + +A+     A +YA  R   G  L    V++  +AD+AL + +A  L++R A
Sbjct: 269 IGIASQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAA 328

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  K   +EAA A++ A        + A A+  +A++ +GG GY+ E    RHYR++
Sbjct: 329 MLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMPAERHYRDA 381

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     L +   L +
Sbjct: 382 RITEIYEGTSEIQRLVIAGHLLR 404


>gi|16950563|gb|AAL32268.1| putative acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           kurstaki]
          Length = 309

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 120/305 (39%), Gaps = 30/305 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L          +    T    + W P+             M K ++     LTE   G+D
Sbjct: 9   LTVHESLVGESIKRWGTEEQKRKWLPE-------------MAKGNLLFSFALTEPEVGSD 55

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
             A+ +  ++++D        KW   + ++D F++ A  EG+     V   + + S  G+
Sbjct: 56  AKAVGTSYKQVNDHFILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMTGV 110

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              ++   + + S+   E+   +        L    G    +     LD    S++   V
Sbjct: 111 STNKMSKLLASNSSHIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGV 169

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           ++A+      + Y+RRR      + +   ++  +A+ +++I AA +L           K 
Sbjct: 170 AIAQEALEAMVAYSRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQEA------GKK 223

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R +    A I   I KY+  KMA  V   A++  GG+G+  E  + R +RE+    I+ G
Sbjct: 224 RQDRHTDAVIETTIAKYFASKMAMKVATNAVQVFGGNGFSREYPVERLFREAKVLEIIEG 283

Query: 446 SGNAM 450
           +   +
Sbjct: 284 TSQVL 288


>gi|294632956|ref|ZP_06711515.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830737|gb|EFF89087.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 392

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 129/361 (35%), Gaps = 25/361 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVA 163
            L  ++   GL      + +  +       +  A  +    L    L  + +  +  ++A
Sbjct: 45  DLRHKAAAMGLFGYALPQEYGGLGLVITQDVELAFEFGYTALAFRSLFGTNNGIAGQVIA 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K W               PM + +      LTE   G+D + + +     ++
Sbjct: 105 GFGTDAQKKRWLE-------------PMAEGACLASFALTEPEAGSDPSGMRTTATWSAE 151

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G       ++  ++P++D F+  A+V G      +   L      GL       K+G   
Sbjct: 152 GWSISGQKRFITNAPLADLFVTFARVRGTEADGKIAVFLVPAGSAGLTVGPKDRKMGQEG 211

Query: 284 NATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
             T ++ F          + G++         +     +  + ++      +L E++ Y+
Sbjct: 212 ATTADVYFDAVRVGHDALISGEVETGFRAAMTVLARGRVHISALATGLAERALDESVRYS 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +    G    D+ +++  +A+    + A  AL+   A  + +   R       RI    
Sbjct: 272 AQNRQGGVPTGDRQLVQAMLAEQQALVLAGKALARDTARKYLDGSDR-------RIAPSA 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C + A      A++  GGSGY+ E ++ R YR++    +  G+     L +   L 
Sbjct: 325 AKLFCTEAAGRAADLAVQVHGGSGYMREVAVERIYRDARLLRLYEGTSEIQKLIIGRELM 384

Query: 460 K 460
           +
Sbjct: 385 R 385


>gi|118618252|ref|YP_906584.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium ulcerans Agy99]
 gi|183980721|ref|YP_001849012.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium marinum M]
 gi|118570362|gb|ABL05113.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium ulcerans Agy99]
 gi|183174047|gb|ACC39157.1| acyl-CoA dehydrogenase FadE7 [Mycobacterium marinum M]
          Length = 395

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 136/410 (33%), Gaps = 44/410 (10%)

Query: 81  TPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKI 135
            P    + P G       D++             I    H + W  + + P  R  A ++
Sbjct: 6   PPTFDPHDPLGLDASLSDDEIAVRDTVRKFCAEHITA--HVAEWFENGDLPAARDLAKQL 63

Query: 136 RAARLYLM---------AQLEAGHLMSPSVTSAS-----MVALMTTPRVHKDWAPKIFSR 181
               L  M         A      L    + +A      +V++  +  +         S 
Sbjct: 64  GGLGLLGMHLQGYGCGGASAVHYGLACLELEAADSGIRSLVSVQGSLAMFA--IAHFGSE 121

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E+      PM    +    GLTE   G+D AA+ ++ ++            W  +  ++D
Sbjct: 122 EHKQRWLPPMAAGELIGCFGLTEPDVGSDPAAMKTRARRDGSDWVLNGRKMWITNGSIAD 181

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             I+ A  E  +  F+VP         G     + +K+  R++ T EL   +        
Sbjct: 182 VAIVWAATEEGIRGFVVPT-----ETAGFAANTIHHKLSLRASITSELVLDDVRLPAEAM 236

Query: 302 LNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           L  +TG       L  L  A   +        R +   A+ YA+ R   G  +    + +
Sbjct: 237 LPGATGVR---GPLTCLSEARYGIVWGAMGAARSAWQCALDYAKERTQFGRPIAGFQLTQ 293

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             + D+A+++     L+ +L    D    R E+ ++        K    + A  +   A 
Sbjct: 294 AKLVDMAVELHKGQLLALQLGRLKDSVGLRPEQVSFG-------KLNNTREAIKICRTAR 346

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             +GG+G   E  + RH     +     G+   M   VL     G   F 
Sbjct: 347 TILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQAFTGLAAFR 395


>gi|322368089|ref|ZP_08042658.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
 gi|320552105|gb|EFW93750.1| acyl-CoA dehydrogenase 1 [Haladaptatus paucihalophilus DX253]
          Length = 387

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 121/361 (33%), Gaps = 32/361 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G +    D    P + + A+ +    L                     +    +    
Sbjct: 53  ELGFYAPNLDGYGLPNLSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHAYGSEEQK 112

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P +              +       GLTE   G++ + + +  +K  D        
Sbjct: 113 ERWLPDL-------------GEGKAVGCFGLTEPEHGSNPSGMETYAEKEGDEYVLNGSK 159

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +SP+SD  ++ A+ +       V   L +   +G+   ++ +K+  R++ T E+  
Sbjct: 160 TWITNSPISDVAVVWAR-DRSAEDSPVRGFLVETDRDGVTTNQIHDKLSLRASITGEISL 218

Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345
            N        L      VE MK  L  L  A   ++   V  A      A  YA  R   
Sbjct: 219 QNVTVPEDAVLP----GVEGMKGPLSCLTQARYGIAWGAVGAARDCFETARDYATERDQF 274

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           GG +    + +  +A++A  I  +  L  RLA+  +    R +  + A+           
Sbjct: 275 GGPIARFQLQQDKLAEMATQITTSQLLVHRLADLKERGDLRPQHVSMAKR-------NNV 327

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +MA      A E +GG+G   +    RH           G+ +   L +   L  G   F
Sbjct: 328 RMARDQARVAREMLGGNGITTDYPPMRHMANMETVYTYEGTHDIHTLVLGQDLT-GIAAF 386

Query: 466 E 466
           E
Sbjct: 387 E 387


>gi|229822328|ref|YP_002883854.1| acyl-CoA dehydrogenase domain protein [Beutenbergia cavernae DSM
           12333]
 gi|229568241|gb|ACQ82092.1| acyl-CoA dehydrogenase domain protein [Beutenbergia cavernae DSM
           12333]
          Length = 388

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 33/366 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VA 163
            ++ +    GL    +        +       A      A       +   V    M + 
Sbjct: 40  EIIAQMGDLGLFGLPFPTEVGGQGKDYLSLCLAVEALARADQSIAVTLEAGVGLGIMPIY 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   + W P + +                    GLTE   G+D  A  +   +  D
Sbjct: 100 RHGTPEQQQRWLPDLLTG-------------RALAAFGLTEAEAGSDAGATRTTAVQDGD 146

Query: 224 GIYCLSGHKWFLSS---PMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
             + + G K F+++   P++    + A       +       +   L      GL     
Sbjct: 147 A-WVIDGSKQFITNSGTPITSVITITAVTGEVVRDDGATVKELSSFLVPSGTPGLEVGPS 205

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
            +K+G  ++ T  L  S         L     G    ++ L    +  A ++    +  L
Sbjct: 206 YDKVGWHTSDTHPLTLSGVRVPASDMLGDRGRGYANFLRALDEGRVAFAALATGAAQGCL 265

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            EA+ YA+ RHV G  +     +   +A +      A    +  A   D       EA+ 
Sbjct: 266 EEALRYAKERHVFGREIGANQHIAFTLARMQSRAHTARLAYYDAAQRIDARLPFKAEASM 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+++A        + A A   +A +  GG G++    + RHYR++    +  G+    ++
Sbjct: 326 AKLVAG-------EAAMANARDASQIFGGYGFLNSSPVGRHYRDAKVLEVGEGTTEVQLM 378

Query: 453 DVLNLL 458
            +   L
Sbjct: 379 VIARSL 384


>gi|228942797|ref|ZP_04105318.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975656|ref|ZP_04136197.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228784044|gb|EEM32082.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228816857|gb|EEM62961.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 337

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 59/297 (19%), Positives = 119/297 (40%), Gaps = 30/297 (10%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    T    + W P++ +              ++     LTE   G+D  A+ +  
Sbjct: 45  GESIKRWGTEEQKRKWLPEMATG-------------NLLFSFALTEPEVGSDAKAVGTSY 91

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +++ D        KW   + ++D F++ A  EG+     V   + + S  G+   ++   
Sbjct: 92  KQVDDHFILNGHKKWISFADIADCFLVFASSEGK-----VSAFIVERSMTGVSTNKMSKL 146

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334
           + + S+   E+   +        L    G    +     LD    S++   V++A+    
Sbjct: 147 LASNSSHIAEIHLQDVKVPAENLLGPIGGGWSYVVN-TALDHGRYSIAWAGVAIAQEALE 205

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y+RRR      + +   ++  +A+ +++I AA +L           K R +    A
Sbjct: 206 AMVAYSRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQEA------GKKRQDRHTDA 259

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
            I   I KY+  KMA  V  +A++  GG+G+  E  + R +RE+    I+ G+   +
Sbjct: 260 VIETTIAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 316


>gi|254472437|ref|ZP_05085837.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
 gi|211958720|gb|EEA93920.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062]
          Length = 561

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 142/378 (37%), Gaps = 43/378 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F  +   +      +     A +  G L + S  +A ++  
Sbjct: 209 EIISEMAEMGVFGLTIPEEFGGMGLGKESMCVVSEELSRAYIGVGSLGTRSEIAAELILG 268

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W P+I S E  PT                TE   G+D+A++ ++  K  D 
Sbjct: 269 GGTEDQKAKWLPRIASGETLPTAV-------------FTEPNTGSDLASLKTRAVKEGDT 315

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQ 273
                G+K +++ P+ +D   +L + +    G   +   + +             G+   
Sbjct: 316 WKVY-GNKTWITHPVRADIMTLLTRTKPEEPGYKGLSMFIAEKPRGSDEEPFPAEGMSGG 374

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVS 326
            ++  +G R     E+ F    GF + D N+      +  K L+       + +A  ++ 
Sbjct: 375 EIE-VLGYRGMKEYEIAFD---GFEVKDENLLGQVEGQGFKQLMQTFESARIQTAARAIG 430

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L   + YA+ R   G  LI+ P +   +A IA +   A  L++  A   D  +  
Sbjct: 431 VAQCALDLGLRYAQERIQFGKSLINFPRVSDKLAIIACETMIARQLTYFSAWEKDSGRRC 490

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A+++         ++A A    A++  GG+G+ +E  I+R   ++   SI  G+
Sbjct: 491 DLEAGMAKLL-------GARVAWAAADNALQIHGGNGFAQEYPISRVLCDARILSIFEGA 543

Query: 447 GNAMVLDVLNLLEKGTNL 464
                  +   L   T L
Sbjct: 544 AEIQAQVIARRLLDETEL 561


>gi|295700543|ref|YP_003608436.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295439756|gb|ADG18925.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 403

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 25/320 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++ S              +      L+E + 
Sbjct: 100 ADFALAMQGLGSGAISLAGTHEQKSRYLPRVASG-------------TAIAAFALSEPQA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 147 GSDVAAMALAAREEGDHYVLDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVDAET 206

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+N        L V   G    M+ L       A  S
Sbjct: 207 PGLDIAERIDVIAPH--PLARLRFTNARVPKSRMLGVPGEGFKIAMRTLDVFRTSVAAAS 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE +  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 265 LGFARHAMAEGLARAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 325 SVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGSAVEMLYREIRALRIYE 377

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+     L V   L K    
Sbjct: 378 GATEVQQLIVGRDLLKAHAA 397


>gi|194761502|ref|XP_001962968.1| GF15703 [Drosophila ananassae]
 gi|190616665|gb|EDV32189.1| GF15703 [Drosophila ananassae]
          Length = 419

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 117/312 (37%), Gaps = 34/312 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   +    +    + + P              M +  +    GLTE   G+D A +
Sbjct: 126 SSLAMGAIYDYGSEEQKQRYLPS-------------MAQGKLIGAFGLTEPNHGSDPAGM 172

Query: 215 TSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++ +  S    Y L+G K W  S+P++D  ++ A+  +G+V  FLV R +   S  GL 
Sbjct: 173 ETRAKYDSKSKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFLVDRKI---SGKGLD 229

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +++ K   R++ T  +   +        L  + G          L++A   ++   + 
Sbjct: 230 TPKIEGKFSLRASPTGMILMDDVRVPEEQLLPNALGFSGPFN---CLNNARYGIAWGALG 286

Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AE     A  Y   R   G  L    ++++ +AD   +IA       ++    D+    
Sbjct: 287 AAESCVEIARQYTLDRKQFGRPLAANQLIQKKLADATTEIALGLQACLQVGRLKDQKLHT 346

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E       M  + K      +  +  +  + +GG+G  +E  + RH     +     G+
Sbjct: 347 PE-------MISMLKRNNTGKSLDIARQMRDMLGGNGISDEYHVIRHVMNLESVITYEGT 399

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 400 HDIHALILGRAI 411


>gi|301771231|ref|XP_002921054.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 438

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 119/332 (35%), Gaps = 30/332 (9%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYTYGSKEQQQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +    +          W  +SP++D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNSPVADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           E       +   L +    GL   +++ K   R+++T  +   +       +L D++   
Sbjct: 229 EDS----CIRGFLLEKGMRGLSAPKIEGKFSLRASSTGMIVMDSVEVPEENVLPDVSGLA 284

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP   +        A   +      L  A  Y   R   G  L    ++++ +AD+  +I
Sbjct: 285 GPFGCLNN-ARFGIAWGVLGAAEFCLHTARQYTLDRIQFGAPLARNQLIQKKLADMLTEI 343

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                   +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +
Sbjct: 344 TLGLHTCLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGISD 396

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + RH     A +   G+ +   L +   +
Sbjct: 397 EYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|222111209|ref|YP_002553473.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221730653|gb|ACM33473.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 619

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 100/593 (16%), Positives = 195/593 (32%), Gaps = 92/593 (15%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          ++D 
Sbjct: 8   TLDFLLYDWLQAESLNARERFADHSRETFDAVLDTCERIAREKYAPFNRTVDTQEPQFDG 67

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V      H   +     G+  +  D +   +         AA  +      +      
Sbjct: 68  ERVILPQCTHDARQAFADSGMLSAAQDYALGGMQLPYV-VESAANSFFGCASISIGSNLL 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ + +  TP   + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 127 TTGNANAILVHGTPLQQQVFAANEFNGRWAGT-------------MCLSEPQAGSSLSDI 173

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
           T++ +              Y L G+K ++SS   +       ++LA++ G          
Sbjct: 174 TTRAEADGADFEVDPLGPRYRLRGNKMWISSGDHELTENIVHLVLAKIPGPDGKLVPGVK 233

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 234 GISLFIVPKKLVDTDGQLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGRYPVRGGAGAI 293

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------- 345
           G+L+G        +  M     +   + + +        ++ YAR R             
Sbjct: 294 GYLVGRPGEGLKCMFHMMNEARIAIGMAATTLGLAGYYASLDYARTRLQGRPVQGSTSAA 353

Query: 346 ---GG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---- 391
              G         LI    +KR +         A AL+   A   DE ++   +AA    
Sbjct: 354 GSAGKDASQPQVPLIRHADIKRMLLAQKSYCEGALALNLYCARLVDEGRTGEPQAAQDAR 413

Query: 392 -YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+    
Sbjct: 414 LLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQ 473

Query: 451 V--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK-VITILRDSISLCKEDKGLARFLT-- 505
              L    ++ +G    + L  T+   +  + K   +    D ++   +D G A      
Sbjct: 474 AADLLGRKVVMQGGAGLQLLARTIGATIAQARKHPELAAWADQLAQALQDVGEATQAAWA 533

Query: 506 ---EKIALASSAAALYRAGMNDIADVFLE---NRFLDNCHSTHCMLHGRFNAA 552
                 ALA++   +   G   +A V+L+   +    +   +     GR  AA
Sbjct: 534 TGNPTEALANAVPYMQAFGHTVLAWVWLDVACSVLARDATLSIAASAGRMGAA 586


>gi|312196848|ref|YP_004016909.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228184|gb|ADP81039.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 387

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 122/357 (34%), Gaps = 27/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           A +      G    +    F  V    A   R         +     +        ++  
Sbjct: 39  AFIEEMQQLGFFGLLAPAEFGGVDISMAGFARVTEELARGWMSLAGAIGGHSVITYLIRT 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + P++ + E             V   + LTE  GG+D+  + +   +  D 
Sbjct: 99  FGTDAQRHAYLPRMATGE-------------VRATMALTEPSGGSDLQGMRTYAVQDGDD 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                   W  ++  S    +L + +   R     +  +L +  P GL       K+G R
Sbjct: 146 WVINGAKTWISNAAHSGLIGLLCRTDRNARPAHRGMSVILVEPGP-GLDISAKIPKLGYR 204

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
                 L F +        L      G  + M+ L    +  A  ++   + +L  AI Y
Sbjct: 205 GVEACTLSFDDMRVPGTAVLGEAPGKGWGQMMRGLEVGRIQVASRALGVGQAALEAAIAY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A++R   G  +     +   IAD+A  + AA  L+   A+ FD       EA  A     
Sbjct: 265 AQQRETFGQPIWKHQSVGNLIADMATQMRAARLLTTDAADRFDSGARCDLEAGMA----- 319

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
             K +  + A  V  +AM   GG GY +E  + R++R++P   +  G+       + 
Sbjct: 320 --KLFASETAMKVALDAMRVHGGYGYSKEFDVERYFRDAPLMILGEGTNEIQRNVIA 374


>gi|226228678|ref|YP_002762784.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091869|dbj|BAH40314.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 392

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 128/354 (36%), Gaps = 27/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
            +   +  + W  + E +  +     R           A    +     +  + L  T  
Sbjct: 56  WLRHAVGGTAWGGAVEVIDTRTICLAR--ETLARHDGLADFAFAMQGLGSGAITLAGTDA 113

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               + P++   E                   L+E   G+D AA+    ++  +      
Sbjct: 114 QKAQYLPRVARGE-------------AIAAFALSEPDSGSDAAALQCAARRDGEDYVLDG 160

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +  ++D +++ A+     G   +   + D    GL      + I         L
Sbjct: 161 EKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADTAGLEIAERIDVIAPH--PLARL 218

Query: 290 EFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +F++        +     G    M+ L       A  ++   R +L EA+     R + G
Sbjct: 219 QFTSCRVPASQRIGAAGEGFKLAMRTLDVFRTSVAAAALGFARRALDEALARVTTRRMFG 278

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G+L D  + + ++A++A  I +A  L++R A   D+ +  + EAA A+ +A        +
Sbjct: 279 GVLADLQLTQSSLAEMATTIDSAALLTYRAAWQRDQGQPVTREAAMAKYVA-------TE 331

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  VI  A++  GG G + +  + R YRE  A  I  G+     L +   L +
Sbjct: 332 GAQRVIDAALQLWGGMGVVHDVPVERLYREIRALRIYEGASEVQQLIIARELLR 385


>gi|207723546|ref|YP_002253945.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
 gi|206588747|emb|CAQ35710.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2]
          Length = 622

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 92/512 (17%), Positives = 180/512 (35%), Gaps = 84/512 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHIIPEVKTALEAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGYFKAANVGTSSYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP     +A              P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQIDTFA-------------QPELEGRFYGTMCLSEPQAGSSLSDIVT 178

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +   +      Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGAKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L +     G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVNADGSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQFRPLGPDGQPRAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +   + +          A+ YAR R   G          
Sbjct: 299 YLVGEPHKGLACMFFMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPAGPSGKDA 357

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396
                 ++D   ++R +      +  A  L+   A   DEA+  ++ A  AR      I+
Sbjct: 358 ASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEARGETDPAVRARLGLLLDIL 417

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L 
Sbjct: 418 TPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIHGLDLLG 477

Query: 457 --LLEKGTNLFEQLFSTLEQDLG---SSGKKVITILRDSISLCKEDKG-LARFL----TE 506
             ++ +    F  L   ++  +G    SG   +     ++ L  +    + R L      
Sbjct: 478 RKVVMQDGAAFAALGQRVQATVGRALDSGDTALAGWGRALGLAAQSLATVTRQLWAAGDP 537

Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNC 538
           ++ LA+++  L   G   IA ++LE       
Sbjct: 538 RVTLANASVYLEAFGHVVIAWIWLEQALAAAR 569


>gi|120434680|ref|YP_860369.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
 gi|117576830|emb|CAL65299.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803]
          Length = 454

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 123/358 (34%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++ +     +    ++    P +      I A  +  +    +      S  +   + 
Sbjct: 112 FEVIEKFRDLNIVGVPYEGYGCPNLPFLMEGIIAQEIARVDVSISTFFGVHSGLALGSIY 171

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           L  +    ++W PK             MQK       GLTE   G+ +A  + +  +   
Sbjct: 172 LCGSEDQKQEWLPK-------------MQKMEKIGAFGLTEPNVGSGVAGGLETTCKFDG 218

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +        KW  ++  +D  I+ A+             L      G   +++K K+  R
Sbjct: 219 ENWVLNGQKKWIGNATFADVTIIWARDLDSNQVKG---FLVRKENPGFKAEKIKGKMALR 275

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +   +        L  +    +   +  +     A  +V   R +   A+ Y +
Sbjct: 276 IVQNALITLKDCKIPESDRLQNANSFKDTANVLRMTRAGVAWQAVGCARGAYESALKYTK 335

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +    +++  + ++  ++ A   + FRL+   D+     E A+ A       
Sbjct: 336 KREQFGRPIASFQLIQNHLVEMLSNLTAMQTMVFRLSEMQDQDLLTDEHASLA------- 388

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +C      V++ A E +GG+G + +  +AR   ++ A     G+     L V   +
Sbjct: 389 KVYCSMRMRDVVSRAREVLGGNGILLDYDVARFVADAEAIYSYEGTKEINSLIVGRAI 446


>gi|311109865|ref|YP_003982716.1| acyl-CoA dehydrogenase, N-terminal domain-containing protein 27
           [Achromobacter xylosoxidans A8]
 gi|310764554|gb|ADP20001.1| acyl-CoA dehydrogenase, N-terminal domain protein 27 [Achromobacter
           xylosoxidans A8]
          Length = 390

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 132/379 (34%), Gaps = 38/379 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ---LEA 148
              D+    P      +     G     +  +        +HK  A  +  MA      A
Sbjct: 36  RELDRAGEFPL--DAYQSLADAGWMSLPFAEAQGGSG--GSHKDLAVLVEAMAYHYASVA 91

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              ++  + +   +AL     + + + P I                S+ + + LTE   G
Sbjct: 92  TAYLTTVIYAGQHIALHGGDHLKRAYLPGI-------------MDGSIRMAIALTEPGAG 138

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGCFLVPRLL 262
           +D AAI+++ ++  D  Y +SG K +++      +++ A            G   +  LL
Sbjct: 139 SDAAAISTRAERCGD-RYVVSGQKLYITCAHVAHYLVAAVRTAPANDPAHAGHRGISMLL 197

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G+   R+ + +G RS    E+   N       L+G+ N     +     +  L 
Sbjct: 198 IPTDAPGVTI-RMLDTLGRRSTRATEIFLDNVEVPVENLIGEENRGWRGLMKCLNMERLC 256

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A      M+  +  A  YA +R   G  +     +    AD+ +       L++R+A  
Sbjct: 257 LAAAGAGNMQHVIDYARDYATQRVQFGQPISQFQAVAHKFADMRIKAETTRLLTYRVAEM 316

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D       E A A       K    +         M+ +GG+GY+ E  + R +R+S  
Sbjct: 317 LDAGIEPRIETAMA-------KVVSTENDFDCANLGMQIMGGAGYMMEHDMQRFFRDSRI 369

Query: 440 NSILLGSGNAMVLDVLNLL 458
             +  G+       +  L+
Sbjct: 370 GPVGGGANEIQRNIIAQLM 388


>gi|153011337|ref|YP_001372551.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563225|gb|ABS16722.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 391

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 134/375 (35%), Gaps = 33/375 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D  +   A  AL++     GL  +    +             A          A    +
Sbjct: 42  VDHSDTDNACRALVKALGQAGLLEAAVSLT-GGEGIDSRKLCIARETLAYHDGLADFAFA 100

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   ++L  +  + +   PK+ S E+                  L+EK  G+D+AA
Sbjct: 101 MQGLGTGAISLTASDELKQTVLPKVASGEW-------------ISAFALSEKLAGSDVAA 147

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           ++   +   D         W  +  ++D + + A+     G   +   +   +  G    
Sbjct: 148 MSCAARADGDDYVLDGEKTWISNGGIADVYTVFARTGEAPGTRGISAFVVFATDPGFSIA 207

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSL 332
              + I     AT  + F N              P E  KI +  LD    SV+   +  
Sbjct: 208 ERIDVIAPHPLAT--IRFDNCRIQAS---RRLGAPGEGFKIAMRTLDIFRASVAAAALGF 262

Query: 333 A-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SR 386
           A     EA+ +A+ R +  G L D  + +  + D+A DI AA  L++R A   D  K + 
Sbjct: 263 ARRAASEALSHAQSRPMFSGALADLQLTQATLGDMATDIDAAALLTYRAAWRRDVQKLNT 322

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++EAA A+++A        + A   I +A++  GG G        R YRE  A  I  G+
Sbjct: 323 TKEAAMAKMVA-------TENAQQTIDKAVQMFGGRGVKSGEIAERLYREIRALRIYEGA 375

Query: 447 GNAMVLDVLNLLEKG 461
                L +   L K 
Sbjct: 376 TEVQKLIIARELLKA 390


>gi|77464873|ref|YP_354377.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
 gi|77389291|gb|ABA80476.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
          Length = 403

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 129/377 (34%), Gaps = 36/377 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSP 154
           + +  PA    +      GL  +     +  +     ++ + A  +  +       +   
Sbjct: 56  EEQTDPAIFREMG---EMGLLGATVPEEYGGLGASYVSYGLIAREIERVDSGYRSMMSVQ 112

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P +              K  +    GLTE   G+D A +
Sbjct: 113 SSLVMYPIYAYGSEDQRRRYLPGL-------------AKGELIGCFGLTEPDAGSDTAGM 159

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  +K + G        W  ++P++D F++ A+ E   G   +   + +    GL   +
Sbjct: 160 KTVARKTAQGYVLSGSKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLEKGMKGLSAPK 217

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA 333
           +  K+  R++ T E+                   VE +K     L+ A   +S   +  A
Sbjct: 218 IGGKLSLRASITGEIVMEGVEV----GEEALLPGVEGLKGPFGCLNRARYGISWGVLGAA 273

Query: 334 EAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           EA  +A R     R   G  L    + +  +A++  DIA     S R+    DEA +   
Sbjct: 274 EACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALGAQASLRVGRLLDEANA--- 330

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A  M  I K   C  A      A +  GG+G  EE  + RH       +   G+ +
Sbjct: 331 ----APEMISIVKRSNCGKALEAARHARDMHGGNGIQEEFHVMRHMANLETVNTYEGTHD 386

Query: 449 AMVLDVLNLLEKGTNLF 465
              L +   +      F
Sbjct: 387 VHALILGRAITGLQAFF 403


>gi|253701404|ref|YP_003022593.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
 gi|251776254|gb|ACT18835.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21]
          Length = 385

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 97/284 (34%), Gaps = 11/284 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  ++E                   +TE   G+D+ ++ +      D         W  +
Sbjct: 100 KFGTKEQKERFIPDWVSAESFGFFAITEPNSGSDVVSMGTTAVDRGDHWEINGQKMWISN 159

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + + D  ++ A  +       +   + +     G+    +++K+G     T E+ F+   
Sbjct: 160 AHVGDWGLLYAVTDRAAKHKGMTCFVINLKGNEGIITAAIESKVGLHCAPTGEISFNQAK 219

Query: 296 GFLLGDLN-VSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L  V  G    M       +  A  ++     ++  AI YA  R   G  +   
Sbjct: 220 IPKDSVLGEVGQGFQICMWQLNNTRISCAAGALGIGAGAIEAAIGYANERTQFGKKIGSY 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++ +IA++  +  AA  L ++ A   D+           +    + K +  + A    
Sbjct: 280 QMIQASIAEMVAEHEAARLLVYQAAWLKDQGLPN-------QYQTSMAKLFASEAAVHAA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E M+  G  G+  E    R  R+S +   + G+ N     +  
Sbjct: 333 TETMKIFGSYGFSTEYPAERWLRDSMSLRTVEGTSNIQKTIIAG 376


>gi|24213260|ref|NP_710741.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658836|ref|YP_002922.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|24193991|gb|AAN47759.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45602081|gb|AAS71559.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 557

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 47/331 (14%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG L++     +  +    T      W P + S E                G+ +TE   
Sbjct: 240 AGSLITRPEIMSKALLKGGTQEQKDKWLPLLASGERM-------------AGIMVTEPNY 286

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDG 265
           G+D+A ++   +  + G        W   +  ++  ++L +   +  +    +  LL + 
Sbjct: 287 GSDVAGVSVTAKPANGGWVINGVKTWCTFAGYANLLLILCRTESDPSLKHKGLSILLAEK 346

Query: 266 S-----------PNGLCYQRLKNK----IGNRSNATVELEFSNTFGF----LLGDLNVST 306
                       P G    +++ K    IG R   + E+ F N F      L G+     
Sbjct: 347 PTFTGHEFTYTQPEG---GKIEGKAIGTIGYRGMHSFEVSFDNYFVPAENLLGGEAGRGK 403

Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
           G    M+      + +A  +   M+ +L  A+ YAR R V    + +  + K  IA +A+
Sbjct: 404 GFYFQMEGFAGGRIQTAARAHGVMQAALEAALRYARERAVFQKPIYEYNLTKYKIARMAV 463

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + A+   +  +AN  D  K + E        A + K++  K+A  V  EAM+  GG GY
Sbjct: 464 ILQASRQYANHVANLLDNHKGQME--------ATLIKFYASKVAEWVTREAMQIHGGMGY 515

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455
            EE +++R++ ++   SI  G+   M L V+
Sbjct: 516 AEEYAVSRYFVDARVFSIFEGAEEVMALRVI 546


>gi|15899477|ref|NP_344082.1| Acyl-CoA dehydrogenase (acd-5) [Sulfolobus solfataricus P2]
 gi|284174275|ref|ZP_06388244.1| Acyl-CoA dehydrogenase (acd-5) [Sulfolobus solfataricus 98/2]
 gi|13816096|gb|AAK42872.1| Acyl-CoA dehydrogenase (acd-5) [Sulfolobus solfataricus P2]
 gi|261601248|gb|ACX90851.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus
           98/2]
          Length = 398

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 122/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EAKQKAKEIGLYGLFASQDLGGQGADYLSLLTATEEIARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ DG
Sbjct: 110 FGNEELKKKYVI-------------PVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DG 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +   + +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMFVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G RS+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLRSSHTAEILLEDVKVQTENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRSAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFRNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|326436363|gb|EGD81933.1| glutaryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818]
          Length = 420

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 128/360 (35%), Gaps = 32/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++      G+  S  D      +   A+ + A  +  +       +   S      + 
Sbjct: 79  REIMNEMGELGMLGSTIDGYGCAAMSYVAYGLLAREVERIDSAYRSAMSVQSSLVMFPIN 138

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++ + E             +    GLTE   G+D A + ++  K+  
Sbjct: 139 EFGTEAHKEKYLPRLATGE-------------IVGAFGLTEPNHGSDPAGMETKLTKVDG 185

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  +SP++D F++ A+++G++   ++ R        GL   +++ K+  R+
Sbjct: 186 GFLLNGTKTWITNSPVADVFVVWAKLDGKIRGVILER-----GMAGLETPKIEGKLSLRA 240

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338
           + T ++   + F          TG          L++A   ++   +  AE     A  Y
Sbjct: 241 SVTGQIVMEDVFVPEENMFPEVTGLK---GPFSCLNNARYGIAWGALGAAESCLEMAREY 297

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L    +M+  +A++  +I+       R+           E   +A     
Sbjct: 298 TLDRKQFGRPLAANQLMQLKMANMLTEISIGLQACLRVGRLK------QERGVFAPDQVS 351

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  A  +   A + +GG+G   +  I RH       +   G+ +   L +   +
Sbjct: 352 LIKRNSCGKALDIARVARDMLGGNGISGDYHIIRHMINLETVNTYEGTHDIHALILGRAI 411


>gi|73986846|ref|XP_533901.2| PREDICTED: similar to Glutaryl-CoA dehydrogenase, mitochondrial
           precursor (GCD) [Canis familiaris]
          Length = 438

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 120/332 (36%), Gaps = 30/332 (9%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSKEQQQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +    +          W  ++P++D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNAPVADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           E R     +   L +    GL   +++ K   R+++T  +           +L D++   
Sbjct: 229 EDRS----IRGFLLEKGMRGLSAPKIEGKFSLRASSTGMIVMDGVEVPEENVLPDVSGLA 284

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP   +        A   +      L  A  Y+  R   G  L    ++++ +AD+  +I
Sbjct: 285 GPFGCLNN-ARFGIAWGVLGAAEFCLHTARQYSLDRIQFGAPLARNQLIQKKLADMLTEI 343

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                   +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +
Sbjct: 344 TLGLHACLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGISD 396

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + RH     A +   G+ +   L +   +
Sbjct: 397 EYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|320590938|gb|EFX03379.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera
           kw1407]
          Length = 547

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/416 (18%), Positives = 146/416 (35%), Gaps = 28/416 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L    +E     N   P +  +        ++     +  + RR    GL  + +  ++
Sbjct: 148 ALRAEVREWIE--NEIEPHVTEWDEA-----RLVPPEIYKEMGRRGYLAGLLGTEYQTAY 200

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSRE 182
                +     +    + +   +     +      ++V       P + K     +    
Sbjct: 201 TENRVQSVPPEKWDLFHELLLTDEISRAASGGFVWNLVGGFGIGCPPLVKFGRKSL---- 256

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD 241
                   +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +  
Sbjct: 257 -KDRILPGILNGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWS 315

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
            +   A   G  G   V  LL + S  G+  +++ +  G  S+ T  + F +       L
Sbjct: 316 DYFTTAVRTGGPGMNGVSLLLIERSFGGVSTRKM-DCQGVWSSGTTYITFEDVKVPVENL 374

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           LG  N     +        +   I  +   RV   EA+ YA +R   G  LI+  V++  
Sbjct: 375 LGKENQGFRVIMTNFNHERIGIIIQCLRFSRVCYEEAVRYAHKRRTFGKSLIEHDVIRLK 434

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAM 416
           +A +A  I A+      +     + ++ +E  A  R+   I                EA 
Sbjct: 435 LAHMARQIEASYNWLENV---IYQCETMTETEAMLRLGGAIAGLKAQSTITFEYCAREAS 491

Query: 417 ECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQL 468
           +  GG  Y        + R YR+  A +I  GS   M+ L +   L  G     +L
Sbjct: 492 QIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSIRQSLRVGKATGMKL 547


>gi|296188613|ref|ZP_06857001.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
 gi|296046877|gb|EFG86323.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7]
          Length = 213

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 83/219 (37%), Gaps = 10/219 (4%)

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A  +   G   +   + +    G    +L++K+G R+    E  + N        +  
Sbjct: 2   VFALTDKTKGSKGMSAFIVEKDFPGFSIGKLEDKMGIRAAQVSETLYKNCRVPKENLVGK 61

Query: 305 -STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              G    MK L    +  A   +     +L E I Y + R   G  +     +   +AD
Sbjct: 62  EGEGFKIAMKALDCGRIGVAAQGLGIAEGALEETIKYVKVRKQFGKEIYKFQGLAWMMAD 121

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + + I  A  L ++ A   D     S  AA A++ A          A  V  EA++ +GG
Sbjct: 122 MDMKIEQARNLVYKAAWEKDNGIPYSVSAARAKLAA-------TDAAMYVTTEAVQILGG 174

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GY+++  + R  R++    I  G+     + +   + K
Sbjct: 175 YGYMKDYPLERMMRDAKITQIYEGTNQVQKMVISGAMFK 213


>gi|333027259|ref|ZP_08455323.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
 gi|332747111|gb|EGJ77552.1| putative acyl CoA dehydrogenase [Streptomyces sp. Tu6071]
          Length = 395

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 116/369 (31%), Gaps = 33/369 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           PA   L +     GL     +           + +    L          +      +  
Sbjct: 54  PAVRELAKELGSLGLLGMHLEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMY 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    ++W P++ + E                  GLTE   G+D   + ++ ++
Sbjct: 114 AIHRFGSEEQKREWLPRMATGE-------------AIGCFGLTEPDHGSDPGGMRTRARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++   ++ A+ E  V  F+VP         G     +K+K  
Sbjct: 161 AGGDWVLDGRKMWITNGSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPIKHKGS 215

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++ T EL            L   TG       L  L+ A   +    +  A      A
Sbjct: 216 LRASVTSELLLDGVRLPADAVLPEVTGLR---GPLSCLNEARYGILWGALGAARSCFRTA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  L    + +  +AD+A+++   T L+  L    D    R E+      
Sbjct: 273 LSYAKEREQFGKPLAGFQLTQAKLADMAVELTNGTLLALHLGRRKDAVGLRPEQ------ 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K      A  +   +   +G +G   E  + RH     +     G+     L + 
Sbjct: 327 -VSLGKLNNVNKALDIARTSRTILGANGISLEFPVMRHMANLESVLTYEGTAEMHTLMIG 385

Query: 456 NLLEKGTNL 464
             L   + L
Sbjct: 386 QALTGESAL 394


>gi|307293083|ref|ZP_07572929.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306881149|gb|EFN12365.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 560

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 130/392 (33%), Gaps = 42/392 (10%)

Query: 89  PGGERW---DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           P    W   D++   P    L+      G+        F  +   +      +       
Sbjct: 194 PFAHDWHLKDELIPLP----LVEELGAMGVFGMTIPEEFGGLGMGKTAMCVVSEELSRGW 249

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +  G L + S  +A ++    T      W P+I                S+      TE 
Sbjct: 250 IGVGSLATRSEIAAELILTGGTDEQKAHWLPQI-------------ANASILPTAVFTEP 296

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLED 264
             G+D+ ++ ++               W   +  +D   +L + +        +  L+  
Sbjct: 297 DTGSDLGSLRTRATLADGEYRVSGNKTWITHAARADVMTLLVRTDPDTKNYSGLSMLIAP 356

Query: 265 G---------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMK 313
                        G+    ++  IG R     E+ F +        L      G  + M 
Sbjct: 357 KQRGTVEAPFPTPGMSGGEIE-VIGYRGMKEYEIGFDDFRVPAANLLGGVEGQGFKQLMA 415

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 + +A  ++   + SL   + YA  R   G  + D P +   +A +A +I  A  
Sbjct: 416 TFESARIQTAARAIGVAQASLDIGLAYALDRKQFGRPIFDFPRVANKLAMMAAEIMGARQ 475

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L++  A   DE K    EA  A+++         ++A A    A++  GG+G+  E  ++
Sbjct: 476 LTYFAARRKDEGKRCDLEAGMAKLI-------GARVAWAAADNALQIHGGNGFATEYQVS 528

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           R   ++   +I  G+G      +   L  G N
Sbjct: 529 RLLADARILNIFEGAGEIQAQVIARRLLDGGN 560


>gi|62550674|gb|AAX88796.1| short-chain acyl-CoA dehydrogenase [Equus caballus]
          Length = 211

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV- 304
            A  +  +    +   L      GL   + ++K+G R+++T  L F +        L   
Sbjct: 1   FAXTDRSLQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDNLLGEP 60

Query: 305 STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G    M+   +  +  A  ++   + +L  A++YA  R   G  L     ++  +AD+
Sbjct: 61  GMGFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADM 120

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           AL + +A  L++R A   D  K  ++EAA A++ A        + A A+  +A++ +GG 
Sbjct: 121 ALALESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGM 173

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GY+ E    RHYR++    I  G+     L +   L K
Sbjct: 174 GYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 211


>gi|312215134|emb|CBX95087.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 553

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/455 (17%), Positives = 151/455 (33%), Gaps = 35/455 (7%)

Query: 17  QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76
           QP+ +   +     +  +  Y+  S      + + +  H  L            ++    
Sbjct: 114 QPTSAAADIEPFDSYGDLVPYADPSWYQTYHSPYYNETHAALRE--------EVRQWVDE 165

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
                       P    W++    P   +  +  R    GL    +   +     K    
Sbjct: 166 ---------KIAPYVTEWEETRKVPDEIYLEMGERGYLAGLLGIHYPAQYTDKRVKSVPP 216

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            +    + M   +            +++              K   +E        +   
Sbjct: 217 EKWDHFHEMILTDELSRTGSGGLVWNLIGGYGIGGPPLF---KFGKKELVKRIGPGLLNG 273

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
              I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +   A   G  
Sbjct: 274 EKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGVWSEYFTTAVRTGGE 333

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  LL + S  G+  +++ +  G  S+ T  + F +       L+G  N     + 
Sbjct: 334 GMNGISVLLIERSAGGVSTRKM-DCQGVWSSGTTYITFEDVKVPVENLIGKENQGFKVIM 392

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  +   I  +   RV   E++ YA +R   G  LID PV++  +A +A  I A+ 
Sbjct: 393 TNFNHERIGIIIQCIRFSRVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIEASY 452

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE-- 426
                L N   + +  +E  A  ++   I                EA +  GG  Y    
Sbjct: 453 NW---LENLVYQCQKMNEMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGG 509

Query: 427 -ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + R YR+  A +I  GS   M+   +    +
Sbjct: 510 QGAKVERLYRDVRAYAIPGGSEEIMLDLSIRQALR 544


>gi|185177597|pdb|2R0M|A Chain A, The Effect Of A Glu370asp Mutation In Glutaryl-Coa
           Dehydrogenase On Proton Transfer To The Dienolate
           Intermediate
          Length = 394

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 78  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 124

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 125 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 184

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 185 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 237

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 238 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 297

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 298 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 350

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 351 SDEYHVIRHAMNLEAVNTYDGTHDIHALILGRAI 384


>gi|27378548|ref|NP_770077.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351696|dbj|BAC48702.1| blr3437 [Bradyrhizobium japonicum USDA 110]
          Length = 392

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 134/372 (36%), Gaps = 27/372 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLH-CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D  +   A   L+R     GL  C++     +           +      A   A    
Sbjct: 41  IDHRDVDGACRKLVRAMGEAGLLDCAVAAPDGDATTIDSRSICLSRESLAYADGLADFAF 100

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +     +  +AL  +  + K   PK+ S E+                  L+EK  G+D+A
Sbjct: 101 AMQGLGSGAIALGGSAELRKAVLPKVRSGEW-------------LAAFALSEKEAGSDVA 147

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A++   +   D         W  +  ++D + + A+     G   +   +      G   
Sbjct: 148 AMSCAARADGDDYVIDGEKTWISNGGIADVYTLFARTGEAPGARGISAFVVFPDDPGFGI 207

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
               + I     AT  L F+N        L     G    M+ L       A  ++   R
Sbjct: 208 ADRIDVIAPHPLAT--LRFANCRIPASRRLGAPGGGFKLAMQTLDIFRASVAAAALGFAR 265

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSE 388
            +L EA+ +AR R + G  L D  + + A+ D+A D  AA  L++R A   D  K   + 
Sbjct: 266 RALDEALSHARSRRMFGATLGDLQLTQAALGDMATDTDAAALLTYRAAWRRDAQKLPTTR 325

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           EAA A++ A        + A  VI  A++  GG G  +   +   YRE  A  I  G+  
Sbjct: 326 EAAMAKLTA-------TETAQRVIDRAVQMFGGRGVRKGEVVESLYREIRALRIYEGATE 378

Query: 449 AMVLDVLNLLEK 460
              L V   L K
Sbjct: 379 VQKLIVARDLLK 390


>gi|308461830|ref|XP_003093203.1| hypothetical protein CRE_07031 [Caenorhabditis remanei]
 gi|308250680|gb|EFO94632.1| hypothetical protein CRE_07031 [Caenorhabditis remanei]
          Length = 428

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 133/398 (33%), Gaps = 57/398 (14%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            P +      GE  D+V         L+    +GL        +     K    +     
Sbjct: 62  QPLVREMDRKGEMDDRV---------LKGCFDNGLMGIEVPEKYGGSGSKFFDAVLVIEE 112

Query: 141 Y--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              + A + A   +  ++    ++ L  T    + + P+                T   +
Sbjct: 113 ISKVDASVAALVDVHNTLFVPLIIEL-GTEEQKQKYLPRSV--------------TEAVL 157

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGC 255
              L E   G+D  A+ +  +K  D         W  +S  S+AF+++    +       
Sbjct: 158 SFALYEVSSGSDAFALKTTAKKDGDDYIINGSKMWITNSEHSEAFLVMLIRVKDTKESLL 217

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             + R+  D     +   R  N        +  L         +    VS          
Sbjct: 218 SWLTRIARDL----VLANRKTN------LESARLPL----VPFISTTFVSPSQRFWENTE 263

Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             L++  + +    + LA+        Y ++R   G  LID   M+  IA I  +I AA 
Sbjct: 264 KCLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGERLIDFQGMQHQIAQIRTEIEAAR 323

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC---------CKMAPAVIAEAMECIGG 421
            L +  A   +       EAA A++ A                 ++A    ++ +E +GG
Sbjct: 324 LLVYNAARMKENGLPFVREAAMAKLFASQVTTETESLRSQSTYFQVATNTTSKCVEWLGG 383

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            G+ +E  + ++YR+    +I  G+ N  +  +  L++
Sbjct: 384 VGFTKEFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 421


>gi|149185350|ref|ZP_01863667.1| butyryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
 gi|148831461|gb|EDL49895.1| butyryl-CoA dehydrogenase [Erythrobacter sp. SD-21]
          Length = 389

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 148/396 (37%), Gaps = 30/396 (7%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFE 125
              Q+ AR  A    P L          ++ +F  PA   ++RR    G         + 
Sbjct: 10  RELQDAARTFARKELPHL------AREMEEKDFSVPA--EMVRRYGEMGFLGVNLPEQYG 61

Query: 126 PVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
            +       +     + M +   A  +    V  A  +    +  +     P++ S E  
Sbjct: 62  GLGLGHLEALLVLEQFAMISNAVAFPIFEALVGPARTIERFGSDALRAKIIPQVVSGE-- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        + + ++E   GT +  ++++ ++  D        +W   +  +  ++
Sbjct: 120 -----------ATVAVSMSEPDAGTALTDLSTRAREEGDQFILDGNKRWTSGAGHARYYV 168

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +  ++    G   +  LL D    G+ +   +  +G R   T ++ F          +  
Sbjct: 169 VYTRLSDAPGAKGIGALLVDKEMQGMSFGSREQLMGFRGIETRDITFDGVKVPRENLIVP 228

Query: 305 STGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           + G  + M    L    +A  S+     +L +A  Y + R   G  ++D   ++  +A++
Sbjct: 229 AGGFGKLMSAFGLERCGNATQSLGLAAAALEQATEYVQERAAFGKPIVDFQAVQMRLAEM 288

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A+ + AA  L +R A + ++    +E+   +   +   K +  ++  +V A  M+ +GG 
Sbjct: 289 AMQVEAARLLIYRAAANSEQ----NEDGLPSVYESSTAKCYANEIVRSVTANGMQVMGGY 344

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY +E  + +  R+  A  I  G+ +    ++   +
Sbjct: 345 GYHKEYGMEQRVRDGFAWGIAGGTTDVQKTNIAAAI 380


>gi|225679793|gb|EEH18077.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 522

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 77/392 (19%), Positives = 141/392 (35%), Gaps = 26/392 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + WD+    P   +  +  R    GL    ++ +      K     +    +     
Sbjct: 138 PYVQEWDEARAIPEDLYKQMGERGYLAGLMGVAYNPALSKNKVKSVPPEKWDFFHEFIVT 197

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P V K    ++  R         +      I L +TE
Sbjct: 198 DELSRAASGGLVWNLIGGFGIGCPPVMKYGKKELIDR-----IVPGILAGEKRICLAITE 252

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 253 PDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMNGISVLLI 312

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +  
Sbjct: 313 ERSAGGVKTRKM-DCQGMSTSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERIGI 371

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 372 IIQCVRFSRVCYEESVKYAHKRRTFGNRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 431

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARH 433
            +  D   +     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 432 QSMDDTEAAFRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYTRGGQGGKIERL 486

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           YR+  A +I  GS   M+   +    K    F
Sbjct: 487 YRDVRAYAIPGGSEEIMLDLSMRQSLKVHQFF 518


>gi|300693094|ref|YP_003749067.1| acyl-CoA dehydrogenase oxidoreductase protein (abmd) [Ralstonia
           solanacearum PSI07]
 gi|299075131|emb|CBJ34413.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum PSI07]
          Length = 398

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 137/400 (34%), Gaps = 34/400 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSF 124
               ++LA   +    +   +   G   D         AL+R+    G   H        
Sbjct: 13  DDKHRKLAAELDAWAAEHVPHD-HGADVD-----AECRALVRKLGQAGWLRHAVGGTAHG 66

Query: 125 EPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                     I   R  L      A    +     +  ++L  TP     +  K+   E 
Sbjct: 67  GAGETIDTRAICLIRETLARYSGLADFAFAMQGLGSGAISLHGTPEQRARYLTKVARGE- 125

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                             L+E   G+D+AA+    +   D         W  +  ++D +
Sbjct: 126 ------------AISAFALSEPDAGSDVAAMACAARADGDSYVLDGEKTWISNGGIADFY 173

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+     G   +   + D    G       + I         L F++        + 
Sbjct: 174 VVFARTGEAPGARGISAFIVDAGTPGFEIAERIDVIAPH--PLARLRFTDCRIPAGQRVG 231

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    M+ L       A  ++   R +L EA+  A  R +  G+L D  + +  +A
Sbjct: 232 AAGEGFKVAMRTLDVFRTSVAAAALGFARRALDEALARATTRRMFNGVLADFQLTQAKLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A  I +A  L++R A   D+ ++ + EAA A++ A        + A  VI  A++  G
Sbjct: 292 QMATAIDSAALLTYRAAWQRDQGRTVTREAAMAKMTA-------TENAQQVIDAAVQMWG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G + ++ + R YRE  A  I  G+     L +   L +
Sbjct: 345 GLGVVSDQPVERLYREIRALRIYEGATEVQQLIIARDLLR 384


>gi|15558970|gb|AAL02066.1|AF320253_4 putative acyl-CoA dehydrogenase [Azoarcus evansii]
          Length = 404

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 130/373 (34%), Gaps = 28/373 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHL 151
            D  +   A   L+      G        +F   + +   +        +A  +  A   
Sbjct: 32  IDHHDTDAACRRLVAALGRSGFLRYCVPAAFGGALPELDSRALCIARETLAYHDGLADFA 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L  +P + +   PK+ S E+                  LTE   G+D+
Sbjct: 92  FAMQGLGSGAITLAGSPELQRRVLPKVASGEW-------------IAAFALTEPEAGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AA+ +  +   D         W  +  ++D + + A+     G   +   +      G  
Sbjct: 139 AAMATSARLDGDHYVLDGEKTWISNGGIADVYCVFARTGDAPGTRGLSAFVVHPDMPGFE 198

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGM 328
                + I         L F+     +   L     G    M+ L       A  ++   
Sbjct: 199 IAERLDVIAPH--PLARLRFNGLRVPVENRLGASGEGFKIAMRTLDIFRASVAAAALGFA 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R +L EA+ +AR R + G  L D  + +  + ++A D+ AA  L+ R A   D A K  +
Sbjct: 257 RRALDEALAHARGRAMFGHTLADFQLTQAKLGEMATDVDAAALLTARAAWQRDVAKKPTT 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EAA A++ A        + A  VI  A++  GG G      +   YRE  A  I  G+ 
Sbjct: 317 REAAMAKMTA-------TENAQRVIDAAVQMHGGQGVRVGVKVESLYREIRALRIYEGAT 369

Query: 448 NAMVLDVLNLLEK 460
               L V   L K
Sbjct: 370 EVQKLIVARELMK 382


>gi|126666886|ref|ZP_01737862.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126628602|gb|EAZ99223.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 448

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/387 (19%), Positives = 147/387 (37%), Gaps = 48/387 (12%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIM 245
           M     A  + LTE   G+ +A I +     + G Y + G K ++S    +       ++
Sbjct: 1   MLSGQYAGTMALTEPHAGSSLADIRTSATPDNAGHYLIKGAKIYISGGEQNITENIVHMV 60

Query: 246 LAQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELEFSN- 293
           LA+++G   G   +   +            G  NG+    L +K+G R   +  L F + 
Sbjct: 61  LAKIKGAPAGVKGISLFIVPKLRLSETGGSGERNGVALAGLIHKLGYRGTTSTALSFGDD 120

Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---- 347
               G+L+G+ +     +  M     +     +          ++ YA+ R         
Sbjct: 121 AECHGYLVGEPHQGLKYMFQMMNEARVGVGCGAAVIGYRGYMHSLAYAKDRLQGRRAADN 180

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYAR 394
                   +I+   ++R +           AL    A   D      E + R E      
Sbjct: 181 NPQSEQVPIIEHADVRRMLLAQKAYSEGGLALCLYGARLMDDQNTHPEPQKRQEAGQLLD 240

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ P+ K W  +  P     A++  GG+GY  E  + + +R++  N I  G+     LD+
Sbjct: 241 LLTPVIKAWPSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDL 300

Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSSGKK-----VITILRDSISLCKEDKGLARFL--- 504
           L   + +  ++  + L   ++ DL ++         +++        K  + L + L   
Sbjct: 301 LGRKVWQNQSHGLQLLLDAMQADLQAATSARCEPWALSLSETLQQAVKVTQSLGKTLMAG 360

Query: 505 -TEKIALASSAAALYRAGMNDIADVFL 530
            TE+ ALA+++  L+  G   +A ++L
Sbjct: 361 ETEQ-ALANASCYLHLFGHICVAWMWL 386


>gi|311743917|ref|ZP_07717723.1| glutaryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311313047|gb|EFQ82958.1| glutaryl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 424

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 123/398 (30%), Gaps = 30/398 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + ++  T ++LA        +       G  +D+         L R     G+     + 
Sbjct: 48  DRLVDDTERDLAAAVRSFVDRRVRPDV-GTWFDEARLP--VRELARELGDLGVMGMHLEG 104

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    A+ +    L          +      +   +    +      W P++ + E
Sbjct: 105 YGCAGSSATAYGLACLELEAGDSGLRSLVSVQGSLAMYAIHRWGSEEQRTTWLPRMATGE 164

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G+D   + ++ ++            W  +  ++D 
Sbjct: 165 -------------ALGCFGLTEPDFGSDPGGMRTRARRDGSDWVLDGSKMWITNGSVADV 211

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ +  +  F+VP         G     +  K+  R++ T EL            L
Sbjct: 212 AVVWARTDEGIRGFVVPT-----DTPGFSAPEITRKLSLRASVTSELVLEGVRLPADAML 266

Query: 303 NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             + G    +  L          ++   R  L  A+ YAR R +    L    + +  +A
Sbjct: 267 PEAAGLSGPLSCLNEARFGIVFGAMGAARDCLRTALDYARDRQIFDQSLASFQITQTKLA 326

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ L++     L+  L    D  + R E+         + K    + A  +  E    +G
Sbjct: 327 DMTLELGKGMLLALHLGRLKDAGELRPEQ-------VSLGKLNNVREAIGIARECRTILG 379

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +G   E  + RH     +     G+     L +   L
Sbjct: 380 ANGISLEYPVLRHANNLESVLTYEGTSEVHQLTIGRAL 417


>gi|90423555|ref|YP_531925.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90105569|gb|ABD87606.1| butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18]
          Length = 385

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 137/375 (36%), Gaps = 29/375 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMS 153
           D+ E  P    + R     G+  + +   +  +    A      R    A    A   ++
Sbjct: 28  DEREEFPI--DVFRAVGRFGVFGAGFPSDYNGLALGFAVYAGLIREIAQACASTAMSAVA 85

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +A  + L  + R+ +   P +                       +TE   G+DIAA
Sbjct: 86  HATLAALPIFLGGSERLKRRLLPALIGG-------------DAIGAFAMTEAGSGSDIAA 132

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCY 272
             +  ++  D  Y L+G K F+++       ++  +     G   +     +    G   
Sbjct: 133 TATTAKEAGDH-YLLNGAKVFITNANVADVAVVVAKTSPAAGILGLSLFAVEKGMPGFQT 191

Query: 273 -QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R + K+G R++ T EL F++       L+G  N     ++       LD A +++   
Sbjct: 192 SGRRERKLGMRASDTGELAFTDVRVPKDNLIGRRNGGFAILQQTLPAARLDMAAIAIGIS 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +    + +A  R   G  +    +++R +AD+   I AA  L        D     ++
Sbjct: 252 ERARDLCVDHAVGRRQFGKPIGRFQLVQRMLADMETSIDAANLLLAHGLELRDRGLPLAK 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  +A   K +  +MA  +   A++  G +GY  +  + R YR++    I  G+  
Sbjct: 312 -------VASEAKLFASEMAVEITRNAIQIHGAAGYSRDLPLERLYRDAKLTEIGDGTSE 364

Query: 449 AMVLDVLNLLEKGTN 463
              L + + + K  +
Sbjct: 365 IQRLIIADEMIKARS 379


>gi|324998334|ref|ZP_08119446.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 381

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 26/359 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           HP    + R+    G         +    +     +         Q       + ++ +A
Sbjct: 39  HPHSEEVYRKMADLGWLGIAAPEEYGGAGQGMRELLVFLEETAYGQAPISGFGT-TIITA 97

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           + +    T    ++    +   +               + + ++E   G+D+  +  +  
Sbjct: 98  AAIEKFGTEAQKQELLGGMCRGD--------------VLSISMSEPEAGSDVGGLKCRAT 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNK 278
           K  +G        W  ++ ++   +++A+     G    +   +      GL    + + 
Sbjct: 144 KTENGWRIDGQKTWCSNAHIASHILLVARTSTEGGKHDGLTMFVVPAGAAGLSVHGI-DT 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G +     +L F         ++G        +     L  +  A + +   R +  + 
Sbjct: 203 MGGKEVN--DLYFDGCELPADAVVGAEGQGWKQLMAGLNLERMILAGLMLGLARRAFDDT 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y + R   G  +     ++  IAD A ++AA   L    A + DEA+      A    
Sbjct: 261 VAYVKERKQFGRPVGSFQALRHRIADNATELAATKLLVHDTARTIDEAEP----GALFPR 316

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            A + K    ++A  +  E M+ +GG GY  E  + R  R+S  +++  G+       +
Sbjct: 317 EASMAKLKATELAKHLSLEGMQMLGGYGYATEYGMERLLRQSVVSTVYGGTSEIQRDII 375


>gi|115712879|ref|XP_787606.2| PREDICTED: similar to LOC446287 protein, partial
           [Strongylocentrotus purpuratus]
 gi|115955109|ref|XP_001185668.1| PREDICTED: similar to LOC446287 protein, partial
           [Strongylocentrotus purpuratus]
          Length = 436

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 19/350 (5%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
           +T    G  +TE+RGG+D+A  T +     +DG + L G+KWF S+  SD  + LA++  
Sbjct: 21  ETFWTSGQWMTERRGGSDVAGGTETLAYPQNDGSFHLHGYKWFSSASDSDMTVALARIVD 80

Query: 250 --------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                      +  F +     +G  NG+  Q+LKNK+G R   T EL    T   L+ +
Sbjct: 81  DDGQYKEGTRGLSLFYLETRTPEGKLNGIEIQQLKNKLGTRQLPTAELLLDGTKAHLVSE 140

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +  M  +    +A M+V+ MR  +  A  Y+ +R   G +++D P+  + ++ 
Sbjct: 141 PGYGVASISPMLTITRFHNATMAVAAMRRMVHYARDYSFQRRAFGKLIVDWPLHVQTLSR 200

Query: 362 IALDIAAATALSFRLANS--FDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMEC 418
           + L+   A AL    A+    DEAK  SE+     R++ P+ K +  K A +V +E +E 
Sbjct: 201 MELETRGAMALLLECAHLLGKDEAKEGSEDDLNLLRLLIPVLKLYTGKQAVSVASEGLES 260

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFSTLEQDLG 477
           IGG GYIE+       R++   SI  G+ N + LD+L  + K      E     ++    
Sbjct: 261 IGGQGYIEDTGFPGILRDAQVLSIWEGTTNILSLDILRSIIKSQGQTMETFLRQVQTRSA 320

Query: 478 SSGKKVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIA 526
           +        ++ +  L  +    L  FL E    A+  A        D+A
Sbjct: 321 TFLTASNQDIQATAKLIGQSCDSLKSFLVES---ANQDAGFMELAARDLA 367


>gi|332668315|ref|YP_004451103.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332337129|gb|AEE54230.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 601

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 75/471 (15%), Positives = 176/471 (37%), Gaps = 57/471 (12%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V  HP+    +   +  G   +  D          A    A  ++  A          +
Sbjct: 71  EVLVHPSMKPAIMAMVEGGWINAHDDFEAGGQQMPYAILNAATLIFHAANANIACHPFLT 130

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             +A+++    +  +++ + P +++  +  T             + LTE + G+ ++ IT
Sbjct: 131 TGAANLIRTFGSAALNETYIPNLYNGTWQGT-------------MALTEPQAGSSLSDIT 177

Query: 216 SQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-VGCFLVPRLLEDG--- 265
           S  + ++DG  Y + G K ++S    +       ++LA+++G  VG   +   +      
Sbjct: 178 SSAEPVNDGEYYKIKGQKIYISGGDHNAVDNVVHLLLARIKGAPVGTKGISLFVVPKLRY 237

Query: 266 -----SPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLGDLNVSTGPVEDMKILI 316
                  N +    +  K+G +      L       +  G+L+G  N     +  M    
Sbjct: 238 ENGELVTNDVTTAGIYGKMGQKGYVAAHLMMGEQHDDCRGYLVGQPNQGLRYMFQMMNEA 297

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALD 365
            + + +++ +    +   ++ YA  R                 +I+   ++R +      
Sbjct: 298 RIGTGMVAAATASAAYYASLKYANERPQGRHPSNKDVHQPQVLIIEHADVRRMLLYQKAI 357

Query: 366 IAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +  + AL  + +   D A     E A        ++ PI K +  +M    +++ M+ +G
Sbjct: 358 VEGSIALLLQCSLYGDLAHHGQGEDAVNANLLLELLTPIAKSYPSEMGIHSVSQGMQVLG 417

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
           G+GY ++  + +HYR+   N+I  G+     +D+L           +L     + L    
Sbjct: 418 GAGYTDDFPLEQHYRDIRVNAIYEGTTTIHGMDLLG---------RKLTMENGKGLQLLS 468

Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531
           K++ T +  ++ +        + +    +L  +   L++    +  +VFL 
Sbjct: 469 KEIQTAIEAALLIPNLKPYAEQLMKTGASLQETTVNLFQLASKESPEVFLA 519


>gi|307946916|ref|ZP_07662251.1| acyl-CoA dehydrogenase family protein [Roseibium sp. TrichSKD4]
 gi|307770580|gb|EFO29806.1| acyl-CoA dehydrogenase family protein [Roseibium sp. TrichSKD4]
          Length = 387

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 123/399 (30%), Gaps = 28/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   +        + +    +       R     D  +   A   L+    H G      
Sbjct: 1   MADTSYLNWPFFEDRHRRLQNDLEDWATRNLGSVDHSDTEAACRELVTILGHGGYLTYSG 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                                      A    +        ++L  T     DW P    
Sbjct: 61  VEPNSDFPLDVRSLCLIRETLARHDGLADFAFAMQGLGTGAISLFGTLTQKADWLPL--- 117

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                      ++        LTE   G+D+A+ T       D         W  +  ++
Sbjct: 118 ----------TRQGKAIAAFALTEPHSGSDVASSTMTATVDGDDFLLNGEKTWISNGGIA 167

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      GL      + I     AT  L F++       
Sbjct: 168 DVYTVFARTGEAPGAKGLSTFIVPADTPGLEVVERLDTIAPHPLAT--LRFTDCRIPASN 225

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +     G    M +L       A  ++   R +L EA+    +R +    L    +++ 
Sbjct: 226 LIGKRGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALDRVVKREIREKPLFALQMVQG 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+ALD+ AA  L +R A + D    R          A + K +  + A  VI +A++
Sbjct: 286 HIADMALDVDAAALLVYRAAWTKDSGAPR------VTREAAMAKLFSTEQAQIVIDKAVQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G     ++ + YRE  A  I  G+ +   + +  
Sbjct: 340 LHGGDGVRSGETVEKLYREIRALRIYEGASDVQKIVIAR 378


>gi|317123441|ref|YP_004097553.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587529|gb|ADU46826.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 620

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 92/509 (18%), Positives = 185/509 (36%), Gaps = 74/509 (14%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
             L ++      K++      +      E    ++ N P    Y P       V    ++
Sbjct: 27  QGLYSDVDVDAAKDILREVARLSENELAESLLDSDRNPPV---YDPATH---SVTMPESF 80

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H   +  +               +V   + +   A +   A   A H+ + S + A+++ 
Sbjct: 81  HKSFKAYVDGDWGNLDVPAELGGMVIPPSLRWATAEMVCGA-NPAVHMYTASYSFANLLY 139

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + T    K  A  I  + +  T             + LTE   G+D+ A  ++  +  D
Sbjct: 140 HLGTDDQKK-LAKHIVDKAWHTT-------------MVLTEPDAGSDVGAGRTKAIQQPD 185

Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED------GS 266
           G + + G K F++S  SD        +LA+ EG       +  F+VP+   D      G 
Sbjct: 186 GTWHIEGVKRFITSAESDLVDNIVHFVLARPEGAGPGTKGLSLFIVPKFHVDLETGELGE 245

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
            NG     +++K+G + + T E+ F +     G LLGD++     +  +     +     
Sbjct: 246 RNGAYVTNVEHKMGLKVSTTCEVTFGDKEPAVGTLLGDVHDGIAQMFHVIENARMFVGTK 305

Query: 324 SVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATA 371
           +++ +      A+ YA++R                  +   P ++R++           A
Sbjct: 306 AIATLSTGYLNALEYAKQRVQGADLTQMTDKTAPRVTITHHPDVRRSLMLQKSYAEGLRA 365

Query: 372 LSFRLANSFDE-----------AKSRSEEAAYARI----MAPITKYWCCKMAPAVIA-EA 415
           L    A   D            A  +  +A  A      + PI K    + A  ++  E+
Sbjct: 366 LVLYTATQLDTVAQAQNGNRTVAVEKGSDAELASRVSDLLLPIVKGLGSERAWVLLGTES 425

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLFEQL--FS 470
           ++ +GGSG++++  I ++ R++  +++  G+     LD      + +KG  L        
Sbjct: 426 LQTLGGSGFLQDYPIEQYVRDAKIDTLYEGTTAIQGLDFFFRKIVRDKGQALQHVAGQIQ 485

Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKG 499
              +DLG S      +L  ++   +   G
Sbjct: 486 EFAKDLGGSLDTERELLGKALEDVQAIVG 514


>gi|56477888|ref|YP_159477.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56313931|emb|CAI08576.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 126/362 (34%), Gaps = 27/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             L R   + G+       ++          A  + A             L +  +    
Sbjct: 39  RDLWRECANVGIQGLPVPEAYGGTGLDALSCAMVLEALGYGCRDGGLVFSLCAHLLACVV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            V    +    + + P +                ++     +TE   G+D  ++ +  ++
Sbjct: 99  PVWRHGSEEQKRRYLPGLCDG-------------TLVGAHAITEPDSGSDSFSMRTHAER 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKI 279
             DG        +  + P++D  ++ A  E   G    V   L +    G    +   K+
Sbjct: 146 DRDGWRINGTKTFISNGPVADVAVVFAVTEPAKGFHGGVTAFLVESDTPGFSAGQKFEKL 205

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAI 336
           G R++   EL F++ +      L    G        +  +  ++    V  +   L  +I
Sbjct: 206 GLRTSPVGELVFTDMYVSPSAVLGQVGGGSAVFSTAMDWERCLLVASHVGTIERLLETSI 265

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YAR R+  G  +     +   IAD+ + + AA  L++R A   +  ++ S +AA A++M
Sbjct: 266 SYARTRNQFGQAIGKFQAVAHKIADMKVQLEAARLLAYRAAWRLENLRNASLDAAMAKLM 325

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    +       + +   GG GY+ E  + R  R++  ++I  G+       +  
Sbjct: 326 -------VSESLLRTALDTVHLHGGYGYMVEYEVERALRDAVGSTIYSGTSEMQRNIIGR 378

Query: 457 LL 458
            L
Sbjct: 379 WL 380


>gi|325104736|ref|YP_004274390.1| Glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
 gi|324973584|gb|ADY52568.1| Glutaryl-CoA dehydrogenase [Pedobacter saltans DSM 12145]
          Length = 452

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 130/368 (35%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      ++ +     +    ++    P        I A+ +  +    A     
Sbjct: 104 WNRAEFP---FDIIPKVAELNICGITFEGYGCPNRSFLMEGIIASEMGRIDASIATFFGV 160

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + +  +    + W P+             MQK  +    GLTE   G+  A 
Sbjct: 161 QSGLAMGSIYVCGSEEQKQKWLPR-------------MQKLELIGSFGLTEPEVGSAAAG 207

Query: 214 ITS-QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             +   ++  +        KW  ++  +D  I+ A+             + +   +G   
Sbjct: 208 GLTVTAKREGNKWILNGQKKWIGNATFADVNIIWARDLDDNQVKG---FIVEKGNSGFKA 264

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
            +++NK+  R      +  +N        L       +  K+  +     A M+V   R 
Sbjct: 265 DKIENKMALRIVQNGLITLTNCEVTEENRLQNCNSFKDVAKVLRMTRAGVAWMAVGCARG 324

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y R R   G  +    +++  + ++  ++ A   L +RL+   D  +   E A
Sbjct: 325 AYESALKYTRERIQFGRPIASFQLIQNHLVEMLSNLTAMQTLVYRLSELQDNNQLTDEHA 384

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C      V++ A E +GG+G + E  +AR   ++ A     G+    
Sbjct: 385 SLA-------KVFCTLRMRDVVSRAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEIN 437

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 438 SLIVGRAI 445


>gi|33600185|ref|NP_887745.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567783|emb|CAE31697.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 131/378 (34%), Gaps = 24/378 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             + P     D+ + +P  H  L      G+      + +          I         
Sbjct: 26  ERFAPLAAEIDRDQRYPEEH--LAPLRESGISGMFVPKEYGGGGASLTSVIAVVETVAQG 83

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
              +  +++     A  V L  T                       + +   A+   L+E
Sbjct: 84  CASSAAILAALSLGAFPVLLGGTAAQKSALL-------------GGLAREGRAVNFALSE 130

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
           +  G+D  A+ +  ++   G        W  +   S  FI+ A+         +   +  
Sbjct: 131 RGAGSDAGAVQATAEREGAGWRIRGEKCWLGNGGHSHHFIVFARTGPEGQRNNISAFVVA 190

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS--NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
               G+     ++K+G R   T  L+         L+G+L            +  +  A 
Sbjct: 191 REAEGVAVDFYEDKMGIRGTTTTNLKLDTWVAEDALVGELGHGLKLALATLTIGRVVVAA 250

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +      + AEA  +A  R   G  +ID   +   +AD    ++++  + +  A ++D 
Sbjct: 251 QANGIALCAYAEACDFAVSRETFGRSIIDHQGIGFKLADAMTGLSSSRMMVYEAARAYDA 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S   A A+++A        +++  V+ +AM+ +GG GY++  +  R YR+     I
Sbjct: 311 GEDISTLGAMAKLLA-------SEVSHTVVDDAMQVLGGRGYVKPSAAERCYRDQRITEI 363

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   ++K
Sbjct: 364 YEGTSEIQRVVLARAIKK 381


>gi|325520672|gb|EGC99721.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 572

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 96/568 (16%), Positives = 191/568 (33%), Gaps = 88/568 (15%)

Query: 40  DSLLVALIANFPSVVHKELELL---GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           D+  +  +  +     +  + +    E + +      A   +   PQ       GER   
Sbjct: 2   DAAALVALPRYAEHSRETFDAVLDTSERIAADLFAPHAARGDREEPQF-----DGERVTL 56

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           +   P     +R     GL  +  D +   +   +  +  +   +  A +        +V
Sbjct: 57  I---PEVEPAVRAFAQAGLIAAGHDEALGGMRLPKLIEAASFLFFQAANIATAAYPFLTV 113

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    +P     +A              P  +      + L+E + G+ ++ I +
Sbjct: 114 ANANLLVAYGSPAQVDAFA-------------RPELEGRFLGTMCLSEPQAGSSLSDIAT 160

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG----------CFL 257
           +     +      Y L+G+K ++S    +       ++LA++    G           F+
Sbjct: 161 RADFDGESPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDEHGRLPPGTRGISLFI 220

Query: 258 VPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGFLLG 300
           VP+ L        G  N +    L +K+G R      L F               GFL+G
Sbjct: 221 VPKYLPGADAGARGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTRHRPGGRAGAIGFLVG 280

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------------GG 347
           + N     +  M     +     +V+        A+ YAR R                  
Sbjct: 281 EPNHGLAYMFHMMNEARIGVGAGAVALGYTGYLHALDYARNRPQGRPLGPAGKDAAAPQA 340

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401
            ++  P ++R +      +    AL    A   D      +A +R++ A    I+ PI K
Sbjct: 341 PIVAHPDVRRMLLAQKAYVEGGLALILYCARLVDQARAHEDAHARTDAARLLDILTPIAK 400

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--E 459
            W  +   A    A++  GG GY  + ++ R YR++  N I  G+     LD+L     +
Sbjct: 401 SWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNPIHEGTHGIQALDLLGRKVGQ 460

Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA-------LAS 512
                   L + +   +  + +        + +L +    L     E  A       LA+
Sbjct: 461 DEGAALRALDARVASTVERARQANAEAAAQADALARRWARLLDVTRELDAIGDPQRRLAN 520

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHS 540
           ++  L   G   +A ++L+        S
Sbjct: 521 ASVYLEAFGHVVVAWLWLDVALAAQAES 548


>gi|17551932|ref|NP_498885.1| Acyl CoA DeHydrogenase family member (acdh-6) [Caenorhabditis
           elegans]
 gi|20141460|sp|P34275|IVD_CAEEL RecName: Full=Probable acyl coa dehydrogenase 6; AltName:
           Full=Probable isovaleryl-CoA dehydrogenase; Short=IVD
 gi|15145275|gb|AAA27913.2| Acyl coa dehydrogenase protein 6, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 408

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 148/380 (38%), Gaps = 23/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+K   +PA H + +     G+        +    R  A  I  A      
Sbjct: 42  EKINPNVAQWEKSGRYPA-HFVFKMLGQLGVFAVNKPVDYGGTGRDFAMSIAIAE----- 95

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+ A    S  + S  + + M+TP + +  +  + +R   P+         +   + ++E
Sbjct: 96  QIGAVDCGSIPM-SVMVQSDMSTPALAQFGSDSLRNRFLRPS-----INGDLVSSIAVSE 149

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D++AI +  ++    +       W  +   +D   +L               +  
Sbjct: 150 PHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNTSNAKNLHKNKSLVCI 209

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
                G+      +K+G RS+ TV+L F +      +++G+         +      L +
Sbjct: 210 PLDSIGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFAYQMNQFNDERLVT 269

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             + +  ++  + E I YAR R + G  L+DQ  ++  +A++  ++ A  +L +R   + 
Sbjct: 270 VAVGLLPLQKCINETIEYARERLIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVLAR 329

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + +          ++  + K    ++A  V  + ++  GG+GY+ +  I+R +R+    
Sbjct: 330 CQGED-------VSMLTAMAKLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFRIF 382

Query: 441 SILLGSGNAMVLDVLNLLEK 460
           SI  G    M+  +     K
Sbjct: 383 SIGAGCDEVMMQIIHKTQSK 402


>gi|197117839|ref|YP_002138266.1| glutaryl-CoA dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197087199|gb|ACH38470.1| glutaryl-CoA dehydrogenase, non-decarboxylating [Geobacter
           bemidjiensis Bem]
          Length = 385

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 97/284 (34%), Gaps = 11/284 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  ++E                   +TE   G+D+ ++ +      D         W  +
Sbjct: 100 KFGTKEQKERFIPDWVSAESFGFFAITEPNSGSDVVSMGTTATDRGDHWEINGQKMWISN 159

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           + + D  ++ A  +       +   + +     G+    +++K+G     T E+ F+   
Sbjct: 160 AHVGDWGLLYAVTDRAAKHKGMTCFVINLKGNEGIITAAIESKVGLHCAPTGEISFNQAK 219

Query: 296 GFLLGDLN-VSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L  V  G    M       +  A  ++     ++  AI YA  R   G  +   
Sbjct: 220 IPKDSVLGEVGQGFQICMWQLNNTRISCAAGALGIGAGAIEAAIGYANERTQFGKKIGSY 279

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++ +IA++  +  AA  L ++ A   D+           +    + K +  + A    
Sbjct: 280 QMIQASIAEMVAEHEAARLLVYQAAWLKDQGLPN-------QYQTSMAKLFASEAAVHAA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            E M+  G  G+  E    R  R+S +   + G+ N     +  
Sbjct: 333 TETMKIFGSYGFSTEYPAERWLRDSMSLRTVEGTSNIQKTIIAG 376


>gi|331696739|ref|YP_004332978.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326951428|gb|AEA25125.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 390

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 117/371 (31%), Gaps = 39/371 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  ++   G         F  +              L  +L    +      SA  +  
Sbjct: 50  DLQAKARRSGFWGITTPEEFGGIALGPVMNAV-----LTMELGRTFVPFRFGGSADNILF 104

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    +               P  +        +TE   G+D   I ++ ++  D 
Sbjct: 105 DADAEQQDAYL-------------LPTIEGRRRSCFAITEPGAGSDARNIRTRARRDGDD 151

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            + +SG K F++    +D  I+ A  +  +G    V   L D    G     +   +G  
Sbjct: 152 -WVISGEKTFITGGHEADFCILFAVTDPELGADGGVTCFLVDRDM-GWTSSPIPT-MGEW 208

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIH 337
             A+  L F          L       E  K L ++          +V      L  A+ 
Sbjct: 209 GPAS--LSFDEVRVPSRNVLGEVGKGFE--KALRWIGQGRYLIPARAVGSAERLLGMAVD 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  + +   ++  IAD A++I +   L+   A   +  +        AR   
Sbjct: 265 YAKVRESMGHKIAEYQAIQWQIADSAVEIESTKWLTLHAAWRAETGRD-------ARHAT 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            I K     MA  V+   ++  GG GY +E  + R YRE     I  G+       +   
Sbjct: 318 SIAKLTGALMANQVVDRVLQIHGGMGYTKELPVERWYRELRLLRIYEGTDEIQRRTIARN 377

Query: 458 LEKGTNLFEQL 468
           L KG      +
Sbjct: 378 LLKGHVALGTI 388


>gi|195358362|ref|XP_002045199.1| GM16092 [Drosophila sechellia]
 gi|194122553|gb|EDW44596.1| GM16092 [Drosophila sechellia]
          Length = 357

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 127/378 (33%), Gaps = 80/378 (21%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
              ++D+   +P     +R+    G+                     A          AG
Sbjct: 49  NAAKFDREHLYPE--KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAG 106

Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +MS + +      L        KD+     + E                   L+E   G
Sbjct: 107 VIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE-------------RVGCFALSEPGNG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A ++     +D                                             
Sbjct: 154 SDAGAASTIATDRADHFV------------------------------------------ 171

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
                  ++K+G R ++T +L F +    ++   N+   P    KI +       +  A 
Sbjct: 172 ------KEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAS 222

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   + +L  A+ YA++R   G  +     +++ IAD++L + +A  L++R A   D+
Sbjct: 223 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQ 282

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  ++EAA A++ A      C         + ++ +GG GY+ + +  RHYR++    I
Sbjct: 283 KQPYTKEAAMAKLAASEAATLCS-------HQCIQILGGMGYVTDMAAERHYRDARITEI 335

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     L +   + K
Sbjct: 336 YEGTSEIQRLVIAGSILK 353


>gi|116327480|ref|YP_797200.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331906|ref|YP_801624.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120224|gb|ABJ78267.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125595|gb|ABJ76866.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 558

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 71/328 (21%), Positives = 135/328 (41%), Gaps = 41/328 (12%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           AG L++     +  +    T      W P + S E                G+ +TE   
Sbjct: 241 AGSLITRPEIMSKALLKGGTQEQKDKWLPLLASGERM-------------AGIMVTEPNY 287

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLL-ED 264
           G+D+A ++   ++ + G        W   +  ++  ++L +   +  +    +  LL E 
Sbjct: 288 GSDVAGVSVTAKQTNGGWVINGVKTWCTFAGYANLLLVLCRTESDPSLKHKGLSILLAEK 347

Query: 265 GSPNGLCY-------QRLKNK----IGNRSNATVELEFSNTFGF----LLGDLNVSTGPV 309
            S  G  +        +++ K    IG R   + E+ F N F      L G+     G  
Sbjct: 348 PSFTGHEFAYTQPEGGKIEGKAIGTIGYRGMHSFEVSFDNYFVPAENLLGGEAGRGKGFY 407

Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M+      + +A  +   M+ +L  A+ YA+ R V    + +  + K  IA +A+ + 
Sbjct: 408 FQMEGFAGGRIQTAARAHGVMQAALEAALRYAQDRSVFQKPIYEYNLTKYKIAKMAVILQ 467

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A+   +  +A+  D  + + E        A + K++  K+A  V  EAM+  GG GY EE
Sbjct: 468 ASRQFANHVASLLDNHQGQME--------ATLIKFYASKVAEWVTREAMQIHGGMGYAEE 519

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455
            +++R++ ++   SI  G+   M L V+
Sbjct: 520 YAVSRYFVDARVFSIFEGAEEVMALRVI 547


>gi|326331602|ref|ZP_08197892.1| putative glutaryl-CoA dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
 gi|325950858|gb|EGD42908.1| putative glutaryl-CoA dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
          Length = 393

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 69/404 (17%), Positives = 128/404 (31%), Gaps = 26/404 (6%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           LEL G   L        R    +  +     P    W +    P    L       G+  
Sbjct: 6   LELFGTEALIGEEDRAIRDTVRSFAE-KEIKPHLADWFEAGSVPV-KELAPELGKLGVLG 63

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +          A+ +    L          +      +   +    +    ++W P+
Sbjct: 64  MHLEGYGCAGTSATAYGLACLELEAADSGIRSLVSVQGSLAMFAIWKWGSEEQKQEWLPR 123

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + + E                  GLTE   G++ A + ++ +K  D         W  ++
Sbjct: 124 MAAGE-------------AIGCFGLTEPDFGSNPAGMRTRARKDGDDWVLSGTKMWITNA 170

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           P++D  ++ AQ +       +   +      G     +K K+  R++ T E+   +    
Sbjct: 171 PVADVAVVWAQTDEGENGKGIRGFVVPTDTPGFSAPVIKQKLSLRASVTGEIVLDSVRLP 230

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                 ++    GP+  +           +V   R  L  AI YA  R +    L    +
Sbjct: 231 ASAAFPEVRGLKGPLSCL-NEARFGIVFGAVGAARDCLESAIAYAASREIYDKPLSGYQI 289

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
            +  +AD+ L++  A  L+  L    DE   RSE+         + K    + A A+  E
Sbjct: 290 TQTKLADMTLELGKAMLLALHLGRLKDEGTLRSEQ-------ISLGKLNNVREAIAIARE 342

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  +G   E  I RH     +     G+     L +   L
Sbjct: 343 CRTILAAAGVTLEYPILRHANNLESVLTYEGTSEVHQLIIGQAL 386


>gi|291416094|ref|XP_002724281.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase [Oryctolagus
           cuniculus]
          Length = 442

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 128/372 (34%), Gaps = 35/372 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              ++      G+            V   A+ + A  L  +       +   S      +
Sbjct: 97  HREMVSELGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSSYRSVMSVQSSLVMHPI 156

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--K 220
               +    + + P++ S E             +    GLTE   G+D   + ++ +   
Sbjct: 157 HAYGSEEQRQKYLPRLASGE-------------LLGCFGLTEPNHGSDPGGMETRARYNP 203

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            S          W  +SP++D F++ A  +      L+   L +    GL   R++ K  
Sbjct: 204 SSKSYTLNGTKSWITNSPVADLFVVWAPCDDG----LIRGFLIERGTRGLSAPRIQGKFS 259

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++AT  +           + NV  G          L++A   ++   +  AE     A
Sbjct: 260 LRASATGMIVMEGVEVP---EENVLPGATGLSAPFGCLNNARYGITWGVLGAAEFCLHTA 316

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  L    ++++ +AD+  +I        RL    D+ K+  E       
Sbjct: 317 RQYTLDRLQFGAPLARNQLIQKKLADMLTEITLGLHSCLRLGRLKDQDKATPE------- 369

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A  +  +A + +GG+G  +E  + RH     A +   G+ +   L + 
Sbjct: 370 MVSLLKRNNCGKALDIARQARDMLGGNGVCDEYHVIRHAMNLEAVNTYEGTHDIHALILG 429

Query: 456 NLLEKGTNLFEQ 467
             +  G   F+ 
Sbjct: 430 RAIT-GIQAFKA 440


>gi|322816584|gb|EFZ24842.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 432

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 110/309 (35%), Gaps = 31/309 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+ + E             +    GLTE   G+D  ++
Sbjct: 144 SSLVMHPIYAFGSDAQKQRFLPKLATGE-------------LIGCFGLTEPNAGSDPMSM 190

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T++ +K++ G        W  S+P++D  ++ A++            + +    G   +R
Sbjct: 191 TTRARKVAGGYSLSGCKTWITSAPLADIAVVWAKLHDTNKIAG---FIVERDFKGFATER 247

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           ++ K+  R++ T  +   N       + NV    +        L SA   ++   V  AE
Sbjct: 248 IEGKLSLRTSCTGMIVLDNCIVP---EENVLPHAIGLKAPFNCLSSARYGIAWGVVGAAE 304

Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A  Y+  R   G  +    +++  +AD   +I  A     R     +E K     
Sbjct: 305 TCFNIARDYSLERKQFGKSIASMQLVQAKLADAVTEITLAMQSCLRAGRLKEEGK----- 359

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              +  +  + K    + A  +     + +GG+G  +E  + RH           G+ + 
Sbjct: 360 --LSHQVISMLKRNNTRKAIEIARAMRDILGGNGISDEYHVMRHVCNLETVLTYEGTYDI 417

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 418 HGLILGRSI 426


>gi|225558821|gb|EEH07104.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 548

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 138/388 (35%), Gaps = 18/388 (4%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P    WD+ +  P   +  +  R    GL    +D +      K          + +   
Sbjct: 164 PYVHEWDEAKVVPEHLYKQMGERGYLAGLMGVAYDPALSRNHVKCVPPESWDFFHELIVT 223

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P V K    ++ +R         +      I L +TE
Sbjct: 224 DELSRAASGGLVWNLIGGFGIGCPPVIKYGKKELVNR-----ILPGILAGDKRICLAITE 278

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ I+ + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 279 PDCGSDVSNISCEAKLTPDGKHYIVNGEKKWITNGIWSDYFTTAVRTGEPGMNGISVLLI 338

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +  
Sbjct: 339 ERSAGGVGTRKM-DCQGMATSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERMGI 397

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A+      L    
Sbjct: 398 IIQCVRFSRVCYEESVKYAHKRQTFGKRLIDHPVIRMKLAHMARQIEASHNWLENLVFQC 457

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRES 437
            ++   +E A          K            EA +  GG  Y        I R YR+ 
Sbjct: 458 -QSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYTRGGQGGKIERLYRDV 516

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLF 465
            A +I  GS   M+   +    K    F
Sbjct: 517 RAYAIPGGSEEIMLDLSMRQSLKVHQFF 544


>gi|118593798|ref|ZP_01551164.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118433593|gb|EAV40258.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 568

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 140/369 (37%), Gaps = 37/369 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++ +    G+        +  +   +      +     A +  G L + S  +A ++  
Sbjct: 215 EIIEQMSELGVFGLTIPEEYGGLGLGKEAMCVVSEELSRAYIGVGSLGTRSEIAAELILC 274

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PKI S E  PT                TE   G+D+A++ ++  K  D 
Sbjct: 275 GGTEEQKQHWLPKIASGEILPTAV-------------FTEPNTGSDLASLKTRAVKDGD- 320

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQ 273
           ++ +SG+K +++ P+ +D   +LA+      G   +   + +             G+   
Sbjct: 321 VWKVSGNKTWITHPVRADIMTLLARTNPDEPGYKGLSMFIAEKPRGTDEEPFPAEGMSGG 380

Query: 274 RLKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            ++  +G R     E+ F      G  L       G  + M+      + +A  ++   +
Sbjct: 381 EIE-VLGYRGMKEYEIAFDGFEVKGENLLGQVEGEGFKQLMQTFEGARIQTAARALGVAQ 439

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + YA  R   G  L+  P +   +A +  ++  A  L++  +   D  K    E
Sbjct: 440 CALDLGLKYAEERVQFGKELVKFPRVADKLAMMTAELMIARQLTYFSSWQKDSGKRCDLE 499

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A    A++  GG+G+  E +I+R   ++   +I  G+   
Sbjct: 500 AGMAKLL-------GARVAWAAADNALQIHGGNGFALEYAISRVLCDARILNIFEGAAEI 552

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 553 QAQVIARRL 561


>gi|119718511|ref|YP_925476.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539172|gb|ABL83789.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 389

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 136/370 (36%), Gaps = 31/370 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W +    PA   L +     G+     +          A+ +    L          + 
Sbjct: 40  DWYEAGTVPA-RELAKELGALGVLGMHLEGYGCAGTTATAYGLACLELEAGDSGVRSLVS 98

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                +   +    +    ++W P++ + E                  GLTE   G++ A
Sbjct: 99  VQGSLAMFAIWKHGSEAQKQEWLPRMAAGE-------------AIGCFGLTEPDFGSNPA 145

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            + ++ ++   G + L G K ++++  ++D  ++ AQ EG +  F+VP         G  
Sbjct: 146 GMRTRARQEPSGDWVLDGTKMWITNGSVADVAVVWAQTEGGIRGFVVPT-----DTPGFS 200

Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              +K K+  R++ T EL           +L +++  +GP+  +        A  +V   
Sbjct: 201 APEIKKKMSLRASVTSELVLDGVRLPADAVLPEVSGLSGPLSCL-NEARFGIAFGAVGAA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  L  AI Y R R +    L    + +  +AD+ L++  A  L+ +L    DE + R E
Sbjct: 260 RDCLETAIAYTREREIFDKPLAAYQLSQAKLADMTLELGKAMLLALQLGRLKDEGRLRPE 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +         + K    + A A+  E+   +G +G   E  + RH     +     G+  
Sbjct: 320 Q-------VSLGKLNNVREALAIARESRTLLGAAGITLEYPVLRHANNLESVLTYEGTSE 372

Query: 449 AMVLDVLNLL 458
              L +   L
Sbjct: 373 VHQLVIGRAL 382


>gi|300712591|ref|YP_003738404.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126275|gb|ADJ16613.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 387

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 118/355 (33%), Gaps = 29/355 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ R    G +    +      V + A+ +    L                     +  
Sbjct: 46  ELISRLGDLGFYAPNLEGYGLSNVSETAYGLLMQELEAGDSGVRSMASVQGALVMYPIYA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    K W P              M K     G  LTE   G+D  ++ +Q ++  + 
Sbjct: 106 FGSEEQKKRWLPS-------------MGKGDAIGGFALTEPEHGSDAGSMETQAERDGEE 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  +W  +SP++D  ++ A+     G   V   L +   +GL    +  K+  R++
Sbjct: 153 FVLNGEKRWCTNSPIADVLVVWARDTSSEGEP-VRGFLVETDRDGLDIDTIDGKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339
           ++ E          +   NV  G       L  L  A   ++   V  A     EA  YA
Sbjct: 212 SSGEFTMDGVR---IPKENVLPGVSGMKGPLSCLTQARYGIAWGAVGAARDCFEEARTYA 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    + +  +A++A  I  +  L  RLA   +  + R +  + A+     
Sbjct: 269 TDREQFGKPIGGFQLQQEKLAEMATQITTSQLLVHRLAELKERGELRPQHVSMAKR---- 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 +MA      A E +GG+G   E S  RH           G+ +   L +
Sbjct: 325 ---NNVEMARDQSRIAREMLGGNGITAEYSPIRHMANMETVYTYEGTHDIHTLIL 376


>gi|56697540|ref|YP_167908.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56679277|gb|AAV95943.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 386

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 97/290 (33%), Gaps = 16/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +        LTE   G+D   + S  ++  D  + L+G K F+S P
Sbjct: 101 CEGDQREKYLLPCVRGEKRELFALTEPDAGSDAMGMKSNARRDGDD-WILNGSKHFISGP 159

Query: 239 MS-DAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
              D  I+ A        R     V   L D    G   +     +  R   T EL F N
Sbjct: 160 CMPDFAIVFAATGADDTPRGPRKRVTAFLVDVGTPGFVCREGTRSVSYRGYKTFELHFDN 219

Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                G +LG+             +  +             L  A  +A  R   G  + 
Sbjct: 220 VRLGPGQILGEEGRGFEIAGQWLGMGRIWVGASCCGKAERILDMATEWAANRRQFGQPIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
                   +AD A+++ AA  +            +R      A   A + K +C +M   
Sbjct: 280 SFQATGFRLADGAMNLRAANLMVTDAV-------ARHRAGRMADQDAAMVKVFCSEMLGR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  +A++  GG G +EE  + R +R+S    I  G+       +   + +
Sbjct: 333 IADDAVQIFGGMGLMEELPVQRLWRDSRLERIWDGTSEIQRHIITRSMLR 382


>gi|85705118|ref|ZP_01036218.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85670440|gb|EAQ25301.1| isobutyryl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 565

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 139/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 216 EIIEELAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELILC 275

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK+ S E  PT                TE   G+D+ ++ ++  K   G
Sbjct: 276 GGTEEQKAHWLPKLASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDEAG 322

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            + ++G+K +++ +  +    +LA+          +   L + +P          G+   
Sbjct: 323 DWKVTGNKTWITHAARTHVMTLLARTVPDTTDHRGLSMFLAEKTPGTDDAPFPTPGMTGG 382

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F N        L G+       + +      + +A  +V   +
Sbjct: 383 EIE-VLGYRGMKEYELGFDNFHIKGENLLGGEEGKGFKQLMETFESARIQTAARAVGVAQ 441

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D  +    E
Sbjct: 442 SALDVAMKYAQDRKQFGRALIEFPRVSGKLAMMAVEIMVARQLTYFSAWEKDHGRRCDLE 501

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E +I+R   ++   +I  G+   
Sbjct: 502 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYTISRILCDARILNIFEGAAEI 554

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 555 QAQVIARRL 563


>gi|170690781|ref|ZP_02881947.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170144030|gb|EDT12192.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 402

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 115/316 (36%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 95  ADFALAMQGLGSGAISLGGTHEQKTRYLPRV-------------ANGTAIAAFALSEPEA 141

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA++   ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 142 GSDVAAMSLAAREDGDAYILDGDKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADT 201

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+         L     G    M+ L       A  S
Sbjct: 202 PGLEIAERIDVIAPH--PLARLHFAGARVPRSQMLGAPGEGFKLAMRTLDIFRTSVAAAS 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE +  A  R + G  L D  + +  +A +AL + ++  L +R A   D+ +
Sbjct: 260 LGFARHAMAEGLARAASRKMFGQTLADFQLTQAKLAQMALTLDSSALLVYRAAWLRDQGE 319

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A+  A        + A  VI  A++  GG G      +   YRE  A  I  
Sbjct: 320 SVTREAAMAKWHA-------SEGAQQVIDAAVQLHGGMGVQSGVPVEMLYREIRALRIYE 372

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 373 GATEVQQLIVGRDLLK 388


>gi|119898222|ref|YP_933435.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
 gi|119670635|emb|CAL94548.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72]
          Length = 383

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 133/376 (35%), Gaps = 34/376 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHL 151
            D  +   A   L+      G        ++   + +   +        +A  +  A   
Sbjct: 33  VDHHDTDNACRQLVAALGKAGFLRYAVPAAYGGALAELDSRSLCIARETLAYHDGLADFA 92

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  +  + +   PK+ + E+                  LTE   G+D+
Sbjct: 93  FAMQGLGTGAITLSGSEEIKRHVLPKVAAGEW-------------ISAFALTEPLAGSDV 139

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            A++ + +   D         W  +  ++D + + A+     G   +   +      G  
Sbjct: 140 GAMSCEARLEGDHYVINGEKTWISNGGIADVYCLFARTGEAPGTRGISAFVVYPDMPGFE 199

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG--- 327
                + I         L F++    +    N    P E  K+ +  LD    SV+    
Sbjct: 200 VAERLDTIAPH--PLARLRFTDMKVPV---ANRLGAPGEGFKVAMRTLDIFRASVAAAAL 254

Query: 328 --MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384
              R +L EA+++AR+R + G  L D  + +  + D+A DI AA  L+ R A   D  K 
Sbjct: 255 GFARRALDEALNHARQRPMFGHTLADFQLTQAKLGDMATDIEAAALLTARAAWRRDVQKL 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EAA A++ A        + A  VI  A++  GG G      +   YRE  A  I  
Sbjct: 315 PTTREAAMAKMTA-------TENAQRVIDAAVQIHGGQGVRIGVMVESLYREIRALRIYE 367

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 368 GATEVQKLIVARELLK 383


>gi|296421750|ref|XP_002840427.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636643|emb|CAZ84618.1| unnamed protein product [Tuber melanosporum]
          Length = 411

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 122/361 (33%), Gaps = 39/361 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV- 162
            +++ +    GL     + ++          + A             L+    T  +   
Sbjct: 81  KSIVEQLFEQGLMGVEVEEAYGGSGMGFGAVVVAIEELARIDPSVSVLVDVHNTLVNTAF 140

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI- 221
               +  + K + PK+               T       L+E   G+D  A+ ++  K  
Sbjct: 141 RTYGSAVLKKKYLPKL--------------ATGTVGSFCLSEPASGSDAFALQTKAVKSE 186

Query: 222 -SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  ++  S+ FI+ A +    G   +   + +    G    + + K+G
Sbjct: 187 SGGSYKITGQKMWITNAAESEVFIVFANIAPERGYKGITAFVVEKGMPGFNIAKKEKKLG 246

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYA 339
            ++++T  L F +         N+     E  K  I  L+   + ++     LA      
Sbjct: 247 IKASSTCVLTFDDVEVPA---ENLLGKEGEGYKYAISLLNEGRIGIAAQMTGLALGAWEN 303

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             ++        +P +K  +                 A        R + A + R  A +
Sbjct: 304 AVKYECNSR-SHKPGLKSRLR----------------ARCSSMPSERRKLAGFVR-EAAM 345

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++A  V   A+E +GG G++ E    +++R+S   +I  G+ N  +  +  LL+
Sbjct: 346 AKLYASQVAQKVSGSAIEWMGGMGFVREGLAEKYWRDSKIGAIYEGTSNIQLQTIAKLLQ 405

Query: 460 K 460
           K
Sbjct: 406 K 406


>gi|300709610|ref|YP_003735424.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299123293|gb|ADJ13632.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 387

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 123/358 (34%), Gaps = 26/358 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G   +       P   + A+ +    L                 +   +    +    
Sbjct: 53  ERGFFATSLAGYGLPDASETAYGLVMQELEACDSGLRSMASVQGALAMYPIHAFGSEEQK 112

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            +W P             PM       G  LTE   G+D + + ++ ++  D        
Sbjct: 113 DEWLP-------------PMGTGQAIGGFALTEPDHGSDPSRMETRAERDGDEYVLDGEK 159

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           +W  +SP++D  ++ A+     G   V   L +   +GL    +  K+  R++++ E   
Sbjct: 160 RWCTNSPIADVLVVWARDTSSEGEP-VRGFLVETDRDGLDIDSIDGKLSLRASSSGEFTM 218

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                  G +L D+    GP+  +        A  +V   R    EA  YA  R   G  
Sbjct: 219 DGVRIPEGNVLPDVEGMKGPLSCL-TQARYGIAWGAVGAARDCFEEARAYATDREQFGKP 277

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    + +  +A++A  I  +  L+ RLA   +  + R +  + A+           +MA
Sbjct: 278 IGGFQLQQDKLAEMATRITTSQLLAHRLAELKERGEMRPQHVSMAKR-------NNVEMA 330

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                 A E +GG+G  +E S  RH           G+ +   L +   L  G   FE
Sbjct: 331 RDQARVAREMLGGNGITDEYSPIRHMANMETVYTYEGTHDIHTLILGQDLT-GIAAFE 387


>gi|254443828|ref|ZP_05057304.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae
           bacterium DG1235]
 gi|198258136|gb|EDY82444.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae
           bacterium DG1235]
          Length = 393

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 133/384 (34%), Gaps = 36/384 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH-----CSIWDRSFEPVVRKQ-AHKIR 136
           +L A        +       W  L +    DG          WD   + +  +   +  R
Sbjct: 34  KLSAKDRTSRDRESRFDADGWKMLAQAGFFDGFLPEDFGGKNWDTLTKVIALEAFGYSCR 93

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              L L        +  P +T         +    K + P++ S                
Sbjct: 94  DNGLALAVSSLVWTIFPPLLT-------FGSDEQKKRYLPQLASGNC------------- 133

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
               G+TE++ G+D  A+ +   + +DG        +   +P++D  ++ A+ +   G +
Sbjct: 134 IAADGITEEQSGSDAMAMQTLATRRNDGYLVNGEKCYIGFAPIADLILLFAKTDPNAGSW 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313
            +   L D +  G+     + K+G R+     + F +       LLG   +      +  
Sbjct: 194 GISAFLVDANTPGIHKSDNREKMGLRTLPMGNIAFRDCLIPHSALLGSEGLGLSLFNESM 253

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                      V  M   L   I +A++R   G  + +   +   IAD+ + +     L 
Sbjct: 254 EWERSFILATQVGAMARQLDSCIAFAKKRSQFGKSISEFQSISNRIADMRVRLETCRLLL 313

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           ++ A+  D+ +S + E+A  ++    +             +A+   G  GY+ E  + R+
Sbjct: 314 YKTASLKDQGESITLESAMTKLTLSESFVASSM-------DAVRIHGAQGYLSEFEVERN 366

Query: 434 YRESPANSILLGSGNAMVLDVLNL 457
            R++    I  G+ +     +  L
Sbjct: 367 LRDATGGLIYAGTSDIQRNLIARL 390


>gi|296423691|ref|XP_002841387.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637624|emb|CAZ85578.1| unnamed protein product [Tuber melanosporum]
          Length = 518

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 132/385 (34%), Gaps = 19/385 (4%)

Query: 92  ERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             W+K +F P   +  +  R    GL    + + + P         +    +     +  
Sbjct: 138 NDWEKQKFVPVEIYKEMGTRGYLPGLLGVKYPKEYTPYSVASVPPEKWDHFHEFILTDEL 197

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                     +M+       +      K   +E        M      I L +TE   G+
Sbjct: 198 SRTGSGGFVWNMI---GGYSIGLPLVLKFGRKELKDRILPGMVTGEKRICLCITEPGAGS 254

Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D+A +  +  K SDG  Y ++G K ++++ +   +  +A   G  G   V  LL +  P 
Sbjct: 255 DVANLNCEANKTSDGRHYIVNGEKKWITNGIWSDYFTVAVRTGGPGMGGVSVLLIERGP- 313

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  + + +  G   + T  + F +       L+G  N     +        L   I   
Sbjct: 314 GVSTREM-DCQGVHGSGTAYITFEDVKVPVENLIGRENAGFKVIMTNFNHERLGIVIQCT 372

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   E++ YA RR   G  LI+ PV++  +A +A  I A       L N   +   
Sbjct: 373 RFSRVLYEESMKYANRRRTFGKKLIEHPVIRMKLAHMARQIEATHNW---LENIVYQGSC 429

Query: 386 RSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPAN 440
             +  A  ++   I                EA +  GG GY +      + R YR+    
Sbjct: 430 MGDTEAMLKLGGAIAGLKAQSTTTFEFCAREATQIFGGIGYTKGGVGAKVERLYRDVRGY 489

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLF 465
           +I  GS   M+   +    K     
Sbjct: 490 AIPGGSEEIMLDLSIRQSLKVHQAL 514


>gi|58269680|ref|XP_571996.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57228232|gb|AAW44689.1| Glutaryl-CoA dehydrogenase, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 426

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 138/400 (34%), Gaps = 34/400 (8%)

Query: 65  VLSCTAQELARMAN-YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +LS     +   A  ++  QL        R +   F PA   +LR     GL  +     
Sbjct: 47  LLSEEELAIHETAKSFSQAQLLPRVTEAYRTEN--FDPA---ILREMGELGLLGATIQGY 101

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
               V   ++ + A  +  +       +   S      +    +      + P++ + E 
Sbjct: 102 GCAGVSSVSYGLIAREIERVDSGYRSAMSVQSSLVMHPINEFGSDAQKDKYLPQLATGE- 160

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       +    GLTE   G+D +++ +   K SDG        W  ++P++D F
Sbjct: 161 ------------IIGCFGLTEPNHGSDPSSMETTATKTSDGWVLNGSKTWISNAPVADLF 208

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+V        V   L +    GL    +KNK+  R++ T  +   +        L 
Sbjct: 209 VIWARVVENGEKGKVRGFLVEKGTAGLSAPAIKNKMSLRASITGSIFMEDVKVSDDAVLP 268

Query: 304 VSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            S G          L++A   +       +   +A A  YA  R+     L    ++++ 
Sbjct: 269 KSNGLGS---PFSCLNNARYGISWGVMGALEDCIARARDYALERNQFKRPLASFQLIQKK 325

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD +         + +L    D+ +  S+       M  + K   C  A       ++ 
Sbjct: 326 LADASTAATLGLLGALQLGRLKDKGEWSSD-------MVSMMKRNNCGEALHHSRVLLDI 378

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+   +E  I RH       +   G+ +   L +   +
Sbjct: 379 LGGNACSDEYHIGRHAANLQVANTYEGTNDIHALILGKAI 418


>gi|239932184|ref|ZP_04689137.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291440548|ref|ZP_06579938.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291343443|gb|EFE70399.1| acyl CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 396

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 132/408 (32%), Gaps = 41/408 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G+       
Sbjct: 26  DLAVRDTVRAWA--ADRVLPYVADWYEKGEL-------PGIRELAREL--GGIGALGMSL 74

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                    A +   A L L A        +      +   V    +    + W P++ +
Sbjct: 75  DGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAVHRFGSEEQKQRWLPRMAA 134

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             V    GLTE   G+D A++ +  ++            W  +  ++
Sbjct: 135 GE-------------VIGCFGLTEPDHGSDPASMRTYAKRDGGDWVLNGRKMWITNGSVA 181

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
              ++ A+ +  +  F+VP         G     +++K   R++ T EL   +       
Sbjct: 182 GVAVVWARTDEGIRGFVVPT-----DSAGFSAPEIRHKWSLRASVTSELVLDDVRLPADA 236

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L  +TG    +  L          ++   R     A+ YA+ R   G  +    + +  
Sbjct: 237 VLPEATGLKGPLSCLSHARYGIVWGAMGAARSCFEAAVDYAKSREQFGRPIGGFQLTQAK 296

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A   
Sbjct: 297 LADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIDICRTARTV 349

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +G +G      + RH     +     G+   M   VL     G + F 
Sbjct: 350 LGANGISLAYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGIDAFR 396


>gi|331699244|ref|YP_004335483.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326953933|gb|AEA27630.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 388

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 138/388 (35%), Gaps = 31/388 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P   + +  E  P +  +L      G    I  R +       A  +     +   Q  
Sbjct: 26  DPLEHQIEDTESIP-YDVVLPALRACGAFGLIIPREYGGAGLSIAQYLPILAEFAKIQGG 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              ++    + A  ++ + +    +   P     E              ++   LTE   
Sbjct: 85  IRAIVHVHNSFAHALSEIGSEEQKQAILPGAAVGE-------------KSLAFALTEPGN 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GT +  ++++ ++  D  Y L G KW   +S ++  F++LA+   R     V  ++    
Sbjct: 132 GTGM-DLSTRARRDGDE-YVLDGRKWLITNSDIASHFLVLAKTADRE----VSAIIVPRD 185

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G     L   +G +     EL F++       L+G        +E    +  +  A  
Sbjct: 186 APGFTIAPLPETMGCKGAEHGELTFTDVRVPAANLVGAEGEGIAHLERALEISRVFIAAS 245

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+     +L  ++ +A+ R   G  + ++  ++R +A++A D+ A   +   +A  +D  
Sbjct: 246 SLGTATRALDLSLRFAKERVTFGRPIGERQAIQRYLAEMATDVYALRGMLADVAAKWDRD 305

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    E+        + K +  +    V   A+   GG GY  +  I R YR++  N + 
Sbjct: 306 QRVPAES-------SLVKQFGLEAVGRVTDRALLVHGGIGYTRKYPIERLYRDARLNWLE 358

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            G      L     L  G    +   S 
Sbjct: 359 EGPPTVQYLVAARQLLDGFTFDDAFDSA 386


>gi|242212672|ref|XP_002472168.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728726|gb|EED82614.1| predicted protein [Postia placenta Mad-698-R]
          Length = 440

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 112/311 (36%), Gaps = 35/311 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++              K  +    GLTE   G+D A +
Sbjct: 150 SSLVMHPIHEFGSDVQKEKYLPRL-------------AKGELVGCFGLTEPNHGSDPAGM 196

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +  ++   G        W  +SP++D FI+ A+   +G++  F++ + +E     GL  
Sbjct: 197 ETTAEETDGGFVINGAKTWITNSPIADIFIIWARAKWDGKIHGFVLEKGME-----GLSA 251

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS- 331
             +K+K+  R +AT  +   N        L   +G          L+SA   +S   +  
Sbjct: 252 PAIKHKLALRCSATGSIFMDNVKVGHDAILPHGSGMGA---PFSCLNSARYGISWGAIGA 308

Query: 332 ----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               +A    YA  RH     L    ++++ + D   + A     S ++    D  K   
Sbjct: 309 LEDSIARTRAYALERHQFKRPLASFQLVQKKLVDAHTEAALGLQASLQVGRLKDAGK--- 365

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A  M  + K   C  A       ++ +GG+   +E  + RH       +   G+ 
Sbjct: 366 ----LAPEMISMVKRNNCGKALEHSRRLLDILGGNACSDEYHVGRHAANLQIVNTYEGTY 421

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 422 DIHTLILGKAI 432


>gi|149756844|ref|XP_001504933.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase [Equus
           caballus]
          Length = 438

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 123/335 (36%), Gaps = 36/335 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQQQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +               W  +SP++D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNHGSDPGSLETRARHNPSGRSYTLNGTKTWITNSPVADLFVVWARC 228

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +GR+  FL+     +    GL   +++ K   R++AT  +   +       + NV    
Sbjct: 229 EDGRIRGFLL-----EKGMRGLSAPKIEGKFSLRASATGLIVMDDVEVP---EENVLPNA 280

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                    L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD+ 
Sbjct: 281 SGLAGPFGCLNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLARNQLIQKKLADML 340

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I        +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G
Sbjct: 341 TEITLGLHACLQLGRLKDQDKATPE-------MISLLKRNNCGKALDIARQARDMLGGNG 393

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +E  + RH     A +   G+ +   L +   +
Sbjct: 394 ISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|41407293|ref|NP_960129.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395645|gb|AAS03512.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 609

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 83/490 (16%), Positives = 165/490 (33%), Gaps = 78/490 (15%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       +         +      G        
Sbjct: 46  ARLAEGPVAETFAFADRNPPV---FDPAEH---AITVPEELAKTVAALKEAGWWRLGMAE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +         A    L+    + +        +  + L       + WA +   R 
Sbjct: 100 EIGGMPAPPP-LAWAVNEMLICANPSANFFCLGPFMSQALYLEGN-EQQRRWAAEGVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +             A  + LTE   G+D+ A  ++  +  DG + + G K F+S      
Sbjct: 158 W-------------AATMVLTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+ L D      G  NG+    +++K+G +S+
Sbjct: 205 TAENIFHLVLARPEGAGPGTKGLSLFYVPKYLFDPKTFELGPRNGVFVTGVEHKMGIKSS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            T EL F        G+L+GD++     +  +     +   + +   +      A+ +A+
Sbjct: 265 PTCELTFGATDVPAVGYLVGDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALAFAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------ 382
            R                  +I  P ++R++           AL    A   D+      
Sbjct: 325 ERVQGADLTQMADKTAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRV 384

Query: 383 -AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                        ++ PI K    + A  V+ E+++ +GGSG++++  + ++ R+S  +S
Sbjct: 385 SGADHDMAHRVDDLLLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDS 444

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD               F  + +D G + + V   +  ++  C E     
Sbjct: 445 LYEGTTAIQALDF-------------FFRKIVRDRGQALQFVTAQITATVDDCDEA---L 488

Query: 502 RFLTEKIALA 511
           R + E +  A
Sbjct: 489 RPIAELLQTA 498


>gi|225871867|ref|YP_002753321.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
 gi|225793368|gb|ACO33458.1| glutaryl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196]
          Length = 392

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 104/311 (33%), Gaps = 31/311 (9%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +     +W PK+ + E                  GLTE   G+
Sbjct: 97  FVSVQSALVMYPIYAFGSEEQKNEWLPKLATGE-------------KLGCFGLTEPDFGS 143

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +   + ++ +K +DG        W  S  ++D  ++ A+VE       V   L +    G
Sbjct: 144 NPGGMRTRARKTADGYVLNGEKMWITSGSIADVAVIWAKVEDEDDR--VRGFLVETDRKG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS----- 324
              + +  K   R++ T  L   +         N+  G       L+ L+ A        
Sbjct: 202 FEARDVHGKWSLRASVTSGLSLQDVHVPAK---NLLPGTGGLKSPLMCLNQARYGISWGV 258

Query: 325 VSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +         A+ Y + R       L    +++  +A +  +I+ A  L   +    D  
Sbjct: 259 IGAAMACYDTALQYTQTRKQFRDQPLASHQLVQEKLAWMITEISKAQLLIHHVGKLKDAG 318

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   E  + A+        W   MA      + + +GG+G  ++  I RH     +    
Sbjct: 319 KVGFEHISMAKR----NNVW---MALECTRISRDMLGGNGITDDYPIMRHMMNLESVKTY 371

Query: 444 LGSGNAMVLDV 454
            G+ +   L +
Sbjct: 372 EGTHDIHTLII 382


>gi|225629002|ref|ZP_03787036.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|254711771|ref|ZP_05173582.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|256029596|ref|ZP_05443210.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|260167316|ref|ZP_05754127.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261319403|ref|ZP_05958600.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261756726|ref|ZP_06000435.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           F5/99]
 gi|265986598|ref|ZP_06099155.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|225616848|gb|EEH13896.1| acyl-CoA dehydrogenase domain protein [Brucella ceti str. Cudo]
 gi|261298626|gb|EEY02123.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261736710|gb|EEY24706.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp.
           F5/99]
 gi|264658795|gb|EEZ29056.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 385

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 126/382 (32%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P     +++ + P      + ++SI  G         +      +  K++A R  ++ + 
Sbjct: 26  PHENLVEELRYVPEEIKQEIQQKSIQAGFAGMNLPEEWGGPGLDKQTKMQAER--VLGKS 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A   M  +     ++                   +       P  +        LTE  
Sbjct: 84  SAALTMCMNRGVTGILFKCK--------------GDQIEKYLKPAIRGERKDAFALTEPG 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLVPRL 261
            G+D   IT++  +  D  + ++G K F+S      FI+L  V G     R         
Sbjct: 130 AGSDARGITTKAVRDGDH-WVINGVKQFISHADIADFIVLIAVTGVDETPRGPRKRFTAF 188

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D +  GL  + +K  I  R      +   +       +LG+         +      +
Sbjct: 189 LLDKTLPGLRVEPMK-SIVTRGYNPTMVYLEDVRVHSDDILGEEGKGFDTANEWLYDGRV 247

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   V            +A  R   G  + +   +   +A++A+DI     +    A 
Sbjct: 248 ALAAHCVGRSERIFEMTKEWAGTRKAFGKTIGEFQGVGFKVANMAVDIKLGDLMVKEAAW 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                    E     R  A +  YWC +M   V  +A++  GG G +EE  I R +R++ 
Sbjct: 308 KI-------ENQTMNRTEASMVNYWCSEMVFRVADDAVQIFGGMGVMEEFPIQRFWRDAR 360

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+       +   L +
Sbjct: 361 IERIWEGTSEVHQDIIAKDLLR 382


>gi|302681023|ref|XP_003030193.1| hypothetical protein SCHCODRAFT_57896 [Schizophyllum commune H4-8]
 gi|300103884|gb|EFI95290.1| hypothetical protein SCHCODRAFT_57896 [Schizophyllum commune H4-8]
          Length = 392

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 121/360 (33%), Gaps = 31/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H +L      GL     +      V   A+ + A  L  +           S      + 
Sbjct: 52  HDILPEMGKLGLLGPTIEGYGCAGVSSVAYGLVAKELERVDSGYRSTASVQSSLVMHPIY 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P++              K  +    GLTE   G+D  ++ +  +++  
Sbjct: 112 EFGTEAQKEKYLPRL-------------AKGELVGAFGLTEPNHGSDPGSMETTAEEVDG 158

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D FI+ A          +   + D    GL    +KNKI  R+
Sbjct: 159 GFILNGSKTWISNAPVADVFIIWANC---KWDNKIRGFIVDKGLKGLSAPPIKNKIALRA 215

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T  +   +        L  + G          L+SA   +       +   L  A  Y
Sbjct: 216 SLTGSIFMDSVRVGQDALLPKTKGLGS---PFSCLNSARYGISWGVMGALEDCLIRAREY 272

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R      L    ++++ +AD   +IA     S ++    D  ++       A  M  
Sbjct: 273 ALERTQFKRPLASFQLVQKKLADAHTEIALGQLASLQVGRLKDAGQA-------APEMIS 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  A A     ++ +GG+G  +E  I RH       +   G+ +   L +   +
Sbjct: 326 MVKRNNCGKALAHSRILLDILGGNGCTDEYHIGRHVNNLQVANTYEGTYDIHTLILGKAI 385


>gi|134113889|ref|XP_774192.1| hypothetical protein CNBG1740 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256827|gb|EAL19545.1| hypothetical protein CNBG1740 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 426

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 138/400 (34%), Gaps = 34/400 (8%)

Query: 65  VLSCTAQELARMAN-YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +LS     +   A  ++  QL        R +   F PA   +LR     GL  +     
Sbjct: 47  LLSEEELAIHETAKSFSQAQLLPRVTEAYRTEN--FDPA---ILREMGELGLLGATIQGY 101

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
               V   ++ + A  +  +       +   S      +    +      + P++ + E 
Sbjct: 102 GCAGVSSVSYGLIAREIERVDSGYRSAMSVQSSLVMHPINEFGSDAQKDKYLPQLATGE- 160

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                       +    GLTE   G+D +++ +   K SDG        W  ++P++D F
Sbjct: 161 ------------IIGCFGLTEPNHGSDPSSMETTATKTSDGWVLNGSKTWISNAPVADLF 208

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+V        V   L +    GL    +KNK+  R++ T  +   +        L 
Sbjct: 209 VIWARVVENGEKGKVRGFLVEKGTAGLSAPAIKNKMSLRASITGSIFMEDVKVSDDAVLP 268

Query: 304 VSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            S G          L++A   +       +   +A A  YA  R+     L    ++++ 
Sbjct: 269 KSNGLGS---PFSCLNNARYGISWGVMGALEDCIARARDYAIERNQFKRPLASFQLIQKK 325

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +AD +         + +L    D+ +  S+       M  + K   C  A       ++ 
Sbjct: 326 LADASTAATLGLLGALQLGRLKDKGEWSSD-------MVSMMKRNNCGEALHHSRVLLDI 378

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+   +E  I RH       +   G+ +   L +   +
Sbjct: 379 LGGNACSDEYHIGRHAANLQVANTYEGTNDIHALILGKAI 418


>gi|317507483|ref|ZP_07965209.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
 gi|316254221|gb|EFV13565.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
          Length = 611

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 94/518 (18%), Positives = 188/518 (36%), Gaps = 75/518 (14%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHA 86
           I  N +  + L   L       +  +     L    +      A   A  A+   P    
Sbjct: 11  IEFNLFECNGLAETLSEGDYGDLDADAAREILRETRKIAEGPLADTWA-PADREPPV--- 66

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y P      +     A    +R  +  G+     D     +   ++    A  +   A  
Sbjct: 67  YDPQTF---EAVLPDALKEGIRLVLDSGVAQLGLDPELGGIPAPRSLGWAAWEMIGGAHS 123

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                   S  +     L  T    + W   I  + +  T             + LTE  
Sbjct: 124 STWFYTGGSAFNNIFYRL-ATEEQKQ-WCKVIAEQNWGAT-------------MVLTEPD 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEGRV------G 254
            G+D+ A  ++     DG + + G K F++S  SD        ++LA+ EG         
Sbjct: 169 AGSDVGAGRTKAALQPDGTWHIEGVKRFITSATSDDVFENIFHLVLARPEGAKAGTKGLS 228

Query: 255 CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNV 304
            F VP+   D      G  NG+    +++K+G +++ T EL F        G+L+G+++ 
Sbjct: 229 LFFVPKWHYDFTTRTKGERNGVFVTNVEHKMGIKASTTCELTFGQHGVPAVGWLVGEVHD 288

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               + D+     +   I S+S +  +   A+ +A+ R                  ++  
Sbjct: 289 GIAQMFDVIENARMMVGIKSISTLSTAYLNALEFAKERVQGQDMTQMLNKEAPKVTIVHH 348

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR----IMAPITKYWCC 405
           P ++R++ +         AL    A   D A +      +   A      + P+ K    
Sbjct: 349 PEVRRSLLEQKAYAEGLRALYLLTATYQDAAAAERLFGADKDLAYRVNDFLLPLVKGVGS 408

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGT-- 462
           +   A +A+A++  GGSG++++  I ++ R++  +++  G+     LD L   + +    
Sbjct: 409 EQGYAHLADALQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQALDFLFRKIVRDQSV 468

Query: 463 ---NLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496
              ++  Q+ S ++ D G+   K+    LR ++   ++
Sbjct: 469 ALNHILGQIQSLVDSDAGNGRLKEAREFLRVALGDFRD 506


>gi|326434123|gb|EGD79693.1| medium-chain specific acyl-CoA dehydrogenase [Salpingoeca sp. ATCC
           50818]
          Length = 393

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 124/386 (32%), Gaps = 33/386 (8%)

Query: 44  VALIANFPSVVHK-----ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            AL+      V +      L     + L+   QE   +A     +     P     D+  
Sbjct: 4   RALLRAAAPGVRRLSSATTLRSGMSFELTSEQQEFVDLARKFAREDVM--PVAAELDRTG 61

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            +P    L+ ++   GL        +  +                A       +  +  +
Sbjct: 62  EYP--WDLVHKAHGLGLMNLHIPEEYGGLGLHSLDGCIITEEIAFACSGVQTALEANSLA 119

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              V L       K +  ++              +  +    G+TE   G+D+A I +  
Sbjct: 120 EMPVILAANDEQKKKYLGRMT-------------EEPLVASYGVTEPIAGSDVAGIKTVA 166

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKN 277
           +K  +         W  ++  ++ F +LA+ +            + DG   GL   R + 
Sbjct: 167 EKKGNDYVLNGQKMWITNAGHANWFFVLAKTDPSAPASKAFTGFIVDGDSAGLTRGRKEM 226

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            +G R + T  + F +        L     G    M          A  +V   + +L E
Sbjct: 227 NMGQRCSDTRGVTFEDVVVPAANVLGKEGDGFKIAMGAFDRTRPPVAAGAVGLAQRALHE 286

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA+ R   G  +     +   +AD+A+ +  A  ++ R A   D+ +  +       
Sbjct: 287 ATTYAQERKAFGRPIAQHQAVAFMLADMAIGVETARLITRRAAWEVDQGRRNT------- 339

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIG 420
             A I K +   +A     +A+E  G
Sbjct: 340 YYASIAKAYAADVANKCATDAVEVFG 365


>gi|330929560|ref|XP_003302688.1| hypothetical protein PTT_14605 [Pyrenophora teres f. teres 0-1]
 gi|311321794|gb|EFQ89219.1| hypothetical protein PTT_14605 [Pyrenophora teres f. teres 0-1]
          Length = 554

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 135/379 (35%), Gaps = 18/379 (4%)

Query: 93  RWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            WD+ +  P   +  +  R    G+    + + +  +  K     +    + M   +   
Sbjct: 174 DWDEAKKVPDEIFLEMGERGYLAGMLGIEYPKDYTNLRVKCVPPEKWDHFHEMIITDELS 233

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                     ++              K   +E        +      I L +TE   G+D
Sbjct: 234 RTGSGGLVWGLIGGYGIGGPPLF---KFGKKELIQRIGPDLLSGKKRICLAITEPDAGSD 290

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +A +T + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL + S  G
Sbjct: 291 VANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGEGMNGVSLLLIERSAGG 350

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  +++ +  G  S+ T  + F +    +   +G +N     +        +   I  + 
Sbjct: 351 VSTRKM-DCQGVWSSGTTYITFEDVKVPVENVIGKVNQGFKVIMTNFNHERIGIIIQCLR 409

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             RV   E++ YA +R   G  LID PV++  +A +A  I A+        N   + +  
Sbjct: 410 FARVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIEASYNWME---NLIFQCEKM 466

Query: 387 SEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANS 441
           ++  A  ++   I                EA +  GG  Y        + R YR+  A +
Sbjct: 467 NDMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGAKVERLYRDVRAYA 526

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  GS   M+   +    +
Sbjct: 527 IPGGSEEIMLDLSIRQALR 545


>gi|302344609|ref|YP_003809138.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641222|gb|ADK86544.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 413

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/431 (18%), Positives = 149/431 (34%), Gaps = 35/431 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E++LS  A +L          +          DK++F       LR +    L    + +
Sbjct: 3   EHLLSKEALKLREEVRELVAWVPRQTILDMDADKIQFP---KEFLREAGRRNLMGCRYPK 59

Query: 123 SFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +           +    +  +  + A      +      +    T      +   + + 
Sbjct: 60  QWGGRGLDWVSTCMTMEEVGTLGYIFACTFGVGAELVCDAIIQHGTDEQKAKYVRPLLAG 119

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-S 240
           E                   LTE RGG+D    ++      D  Y +SG K F+     +
Sbjct: 120 EIF-------------AAECLTEPRGGSDFFGTSTVAVDQGDH-YLVSGQKRFIVGGEGA 165

Query: 241 DAFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           D F++ A+ +          +  L+ D  P G+  + L   +G R      L F +    
Sbjct: 166 DYFLVYARTDHDPKAHPHKALTCLIVDRGP-GVKVEYLYGLMGCRGGGAARLVFKDAVAP 224

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              ++G +N +      M +   L +A M++   R +L  A  Y  RR   G ++     
Sbjct: 225 KSNVVGQINNAYAVFNTMMVPERLGTAAMTIGAARPALEVATGYTTRRKAFGQVIAQFQG 284

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +A+ A+ + A  A+++  A++ D+           R +   TK +  +    V   
Sbjct: 285 VSFQVAEAAMLLDACRAIAYTTASAVDKGVRPDV----VRRLVSQTKKFITESCQKVAHN 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           AM+ +GG GY     + R +R+    SI  GS   M + + +   K     E       +
Sbjct: 341 AMQVMGGIGYTNVFPVERIFRDLRLASIWTGSNEVMSMIIAHQWYK-----EYFERKAAR 395

Query: 475 DLGSSGKKVIT 485
           D  +   +   
Sbjct: 396 DHENDAAEAGA 406


>gi|110347269|ref|YP_666086.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1]
 gi|110287445|gb|ABG65503.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1]
          Length = 381

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 102/285 (35%), Gaps = 12/285 (4%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           + +         P+    + +   LTE   G+D+  + ++  +   G + L G K F+S 
Sbjct: 100 LAADHQRDWFVDPVVSGELTVAYALTEPDAGSDLGGLKTRASRTGAG-WVLRGAKQFISG 158

Query: 238 PM-SDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              +D  I+LA  +            +   S  G  Y     K+G R          +  
Sbjct: 159 ADYADFIIVLAVTDLAAPLRSRFTLFIVPRSNPGFKYSGNFRKMGWRGYQLGAFSLEDCE 218

Query: 296 GFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L    G    M        ++ +   V      L  A +Y R R   G  L D 
Sbjct: 219 LPESHVLGEVGGGFAAMMATINTTRIEYSARYVGMADELLRLARNYVRERQAFGSRLADH 278

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD   ++ A+  L++R A   DE           R+    +K +  +M   V 
Sbjct: 279 QAIQFMLADSDCEVEASRLLTYRAATLADEGDPS------FRVAGSRSKLYASEMVGRVA 332

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              ++  GG+GY+ +  + R YR++ A  I  G+     + +   
Sbjct: 333 DRVLQIFGGAGYMCDWPVERMYRDARAFRIGEGTSEMQRIQIARA 377


>gi|86136638|ref|ZP_01055217.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
 gi|85827512|gb|EAQ47708.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193]
          Length = 386

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 127/399 (31%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   T        + +           ++     D  +   A   L+      G      
Sbjct: 1   MADRTFLSWPFFEDRHRELARELDRWADQTLGHIDHADVDGACRNLVAALGEAGWAQHSG 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             + E +  +    IR           A    +        ++L  T     +W P   S
Sbjct: 61  AMAGESLDVRTLCLIR--ETLARHDGLADFAFAMQGLGTGAISLFGTEAQQAEWLPLTRS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                LTE R G+D+A  T       +         W  +  ++
Sbjct: 119 G-------------KAISAFALTEPRSGSDVANSTMTATLDGEDYVLNGEKTWISNGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      G      +  I     AT  L+FS+       
Sbjct: 166 DVYTLFARTGEGPGAKGLSAFIVPAGLPGFEVVARQQVIAPHPLAT--LQFSDCRIPKSA 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M +L       A  ++   R +L EA+H    R V G  L D  +++ 
Sbjct: 224 LLGQPGGGFKIAMSVLDVFRSTVAAAALGFARRALDEALHRVSTRQVQGAPLFDLQMVQG 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+ALD+ AA  L +R A + D        A      A + K +    A  VI +A++
Sbjct: 284 HIADMALDVDAAALLVYRAAWAKDSG------AMRVTREAAMAKLFSTDQAQQVIDKAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G    + +   YR+  A  I  G+ +   + +  
Sbjct: 338 LHGGDGVRHGQKVEELYRDIRALRIYEGASDVQRVVIAR 376


>gi|325914008|ref|ZP_08176364.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539777|gb|EGD11417.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937]
          Length = 391

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 125/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +D   F   W          GL  +              ++ +    L         
Sbjct: 43  GDAFDAGRFPREWVP---ELAQLGLLGASLPVDDGGAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDAQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG     G  W  +  +++  I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVRDGDGWRLNGGKMWITNGSIANLAIIWAHTDD-----GVCGFLVETDSPG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              Q + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAQDITHKMSLRASVTSALFLDNVFVPEQMRLPSAAGMKAPLGCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  +  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARQCRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|328542070|ref|YP_004302179.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326411820|gb|ADZ68883.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 562

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 144/372 (38%), Gaps = 43/372 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++ +    G+        +  +   +   +  +     A +  G L + S  +A ++  
Sbjct: 209 EVIAQMAELGVFGLTIPEQYGGMGLGKESMVVVSEELSRAYIGVGSLGTRSEIAAELILC 268

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PKI S E  PT                TE   G+D+A++ ++  K  D 
Sbjct: 269 GGTQEQKDKWLPKIASGEILPTAV-------------FTEPNTGSDLASLRTRAVKEGD- 314

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQ 273
           ++ + G+K +++ P+ +D   +LA+ +    G   +   L +             G+   
Sbjct: 315 VWKVYGNKTWITHPVRADVMTLLARTDPDQPGYKGLSMFLAEKPRGTDADPFPAEGMSGG 374

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKILI------YLDSAIMSVS 326
            ++  +G R     E+ F    GF +   N+  G   +  K L+       + +A  ++ 
Sbjct: 375 EIE-VLGYRGMKEYEIAFD---GFEISHENLLGGETGQGFKQLMQTFEGARIQTAARALG 430

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L   + YA  R   G  LI  P +   +A +  ++  A  L++  A   D  +  
Sbjct: 431 VAQAALDLGLRYAEERIQFGRPLIAFPRVSDKLALMTAELMIARQLTYFSAWEKDSGRRC 490

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             EA  A+++         ++A A    A++  GG+G+ +E  I+R   ++   +I  G+
Sbjct: 491 DLEAGMAKLL-------GARVAWAAADNALQIHGGNGFAQEYPISRVLCDARILNIFEGA 543

Query: 447 GNAMVLDVLNLL 458
                  +   +
Sbjct: 544 AEIQAQVIARRI 555


>gi|255263522|ref|ZP_05342864.1| glutaryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
 gi|255105857|gb|EET48531.1| glutaryl-CoA dehydrogenase [Thalassiobium sp. R2A62]
          Length = 407

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 128/367 (34%), Gaps = 34/367 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           L ++    GL  S    ++  +      + + A  +  +       +   S      +  
Sbjct: 67  LFKQMGDAGLLGSTIPETYGGLGANYVTYGLIAREIERVDSGYRSMMSVQSSLVMYPIYA 126

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + + P +                ++    GLTE   G+D A + +  +K   G
Sbjct: 127 YGSEEQRQKYLPGL-------------SAGTLIGCFGLTEPDAGSDPAGMKTIARKTDTG 173

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D F++ A+ E   G   +   + +   +GL   ++  K+  R++
Sbjct: 174 YVLNGSKMWISNSPIADVFVIWAKSEAHGGK--IRGFVLEKGMDGLSAPKIGGKLSLRAS 231

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYAR--- 340
            T E+   +         +     V+ +K     L+ A   +S   +  AE   +A    
Sbjct: 232 ITGEIVMQDVAV----GEDALLPNVQGLKGPFGCLNRARYGISWGVMGAAEFCWHAALQY 287

Query: 341 --RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R      +    + +  +A++  +I      S R+    DEA +       A  M  
Sbjct: 288 GLDRKQFDKPIAQTQLFQLKLANMQTEITLGLQGSLRVGRLMDEANA-------APEMIS 340

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K   C  A  +   A +  GG+G  E+  + RH       +   G+ +   L +L   
Sbjct: 341 LMKRNNCGKALEIARHARDMHGGNGISEDFQVMRHMVNLETVNTYEGTHDVHAL-ILGRA 399

Query: 459 EKGTNLF 465
           + G   F
Sbjct: 400 QTGLQAF 406


>gi|326780207|ref|ZP_08239472.1| Glutaryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326660540|gb|EGE45386.1| Glutaryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 406

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/406 (16%), Positives = 123/406 (30%), Gaps = 32/406 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G      D 
Sbjct: 31  DLAIRDTVRTWA--ADRVLPHIAEWYEKGEL-------PGIRELARELGALGALGMSLDG 81

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   +    +      W P + S E
Sbjct: 82  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKLRWLPAMASGE 141

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +    GLTE   G+D A + +  ++  +         W  +  ++  
Sbjct: 142 -------------IIGCFGLTEPDHGSDPAGMRTYAKRDGEDWILTGRKMWITNGSVAGV 188

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ AQ +       +   +      G     + +K   R++ T EL            L
Sbjct: 189 AVVWAQTDEGADGRGIRGFVVPTDTPGFSAPEIHHKWSLRASVTSELVMDEVRLPADAVL 248

Query: 303 NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
             ++G    +  L          S+   R S   A+ YAR R   G  +    + +  +A
Sbjct: 249 PDASGLRGPLSCLSHARYGIVWGSMGAARASFESALDYARGREQFGRPIGGFQLTQAKLA 308

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+A+++     L+  L    D    R E+ ++        K    + A  +   +   +G
Sbjct: 309 DMAVELHKGILLAHHLGRRMDAGGLRPEQVSFG-------KLNNVREAIEICRTSRTILG 361

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 362 ANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 406


>gi|118462443|ref|YP_881116.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118163730|gb|ABK64627.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 390

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 129/394 (32%), Gaps = 38/394 (9%)

Query: 75  RMANYNTPQLH---AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
           R  + +   L     +   G   D++       AL   +   GL        +       
Sbjct: 27  RFMDAHVHPLEEKLDHDTVGLPRDQLV------ALQAEARELGLWALQTPEQYGGAGLSV 80

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             ++  A      ++ A      +   +   +    +P     +A  I            
Sbjct: 81  LGQVVVAEEAAKCRMGAFFPALGAFGGNPPNIMFKASPEQFAKYAQPIIDGTMTKAYT-- 138

Query: 191 MQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                      +TE  GG+D A AI  +  +  D         W   +P +D  ++ A+ 
Sbjct: 139 ----------AITEASGGSDPARAIQLKAVRDGDSYVLNGSKMWISHAPDADWGVVYART 188

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
               G   +   + +    G+ + R+       S +  EL F N       ++G      
Sbjct: 189 --GEGRNGISAFILEKDTPGVTFSRIPV---MASFSPYELHFDNVRIPAEQMVGAEGQGF 243

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
               D  +   +  A   +   + +L     +A+ R V GG L D+  ++  + D  +D+
Sbjct: 244 ALASDFLVHGRIVYAAGPIGIAQSALDMTCQWAKDRDVFGGRLADKQGIQWMLVDSEVDL 303

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L ++ A + D  ++   +       A + K +  + A  V+   ++  G  G   
Sbjct: 304 RAARLLMYQAAWNADLGRNVRVD-------ASVAKMYGTEAAYKVLDRCIQIHGALGIST 356

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           E  + R +R+     +  G+       +   L K
Sbjct: 357 ELPLERWFRDLRVKRLGEGATEVQREVIARSLVK 390


>gi|296162919|ref|ZP_06845698.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295886830|gb|EFG66669.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 402

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/316 (20%), Positives = 116/316 (36%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 97  ADFALAMQGLGSGAISLGGTHEQKTRYLPRV-------------ANGTAIAAFALSEPEA 143

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+T   ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 144 GSDVAAMTLSAREDGDAYVLDGDKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADT 203

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+         L     G    M+ L       A  S
Sbjct: 204 PGLEIAERIDVIAPH--PLARLHFAGARVPRSQMLGAPGEGFKLAMRTLDIFRTSVAAAS 261

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE +  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 262 LGFARHAMAEGLARAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 321

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 322 NVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGTAVEMLYREIRALRIYE 374

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 375 GATEVQQLIVGRDLLK 390


>gi|124266967|ref|YP_001020971.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
 gi|124259742|gb|ABM94736.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1]
          Length = 617

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/566 (16%), Positives = 190/566 (33%), Gaps = 95/566 (16%)

Query: 38  SSDSLLVALIA--------NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
           + D LL   +          F     +  + + +      A+E    AN        +  
Sbjct: 6   TLDFLLHDWLRVETLTQRPRFAEHSRETFDAVLDTC-ERIARETFEPANRRADVQEPHF- 63

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            GER   V    +           G+  +  D     +      ++ A   +    +   
Sbjct: 64  DGER---VHLPESTRTATEAYAASGMLAAAQDVEIGGMQLPCVVEMAANACFFKGSVAIS 120

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                +  +AS++    TP+    +A   FS  +                + L+E + G+
Sbjct: 121 AYAMLTTGNASLLMAHGTPQQIDSFARHEFSGRWFG-------------SMCLSEPQAGS 167

Query: 210 DIAAITSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254
            +  +T++ +   +G         Y LSGHK ++S    +       ++LA++    G  
Sbjct: 168 SLGDVTTRARPDGEGSEHDPLGPRYRLSGHKMWISGGEHELTENIVHLVLAKIPADDGTL 227

Query: 255 --------CFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEFS-------- 292
                    F+VP+ L        G  N +    L +K+G R      L F         
Sbjct: 228 PAGVKGLSLFIVPKWLVQPGGRLTGERNDVALAGLNHKLGYRGTTNTLLNFGEGRFRPGG 287

Query: 293 --NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----- 345
                G+ +G        +  M     +   + +V         ++ YA++R        
Sbjct: 288 AAGAVGYRVGAPGEGLRCMFHMMNEARIGVGLGAVMLGYAGYESSLAYAKQRPQGRPLGA 347

Query: 346 ---GGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEEAAYAR 394
              G     +++   +KR +      +    AL+   A   D+     A  ++E      
Sbjct: 348 KDAGRPPVAIVEHADVKRMLLAQKAYVEGGLALALYCARLVDDKRSGSATEQAEAGVLLE 407

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           ++ PI K W  +      + A++ +GGSGY  +  + +H+R++  N I  G+     LD+
Sbjct: 408 LLTPIAKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQHWRDNRLNMIHEGTHGIQGLDL 467

Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSSGK---------KVITILRDSISLCKEDKGLARF 503
           L   ++  G      L   ++  +  +G+          +   L+   +  K        
Sbjct: 468 LGRKVVMDGGKGLRLLAGRIDASIARAGQVAGLAEQGNALARALQHLGAATKAAWASGE- 526

Query: 504 LTEKIALASSAAALYRAGMNDIADVF 529
              + ALA++   L   G   +A ++
Sbjct: 527 --PRDALANATPYLQAFGHVVLAWMW 550


>gi|254461686|ref|ZP_05075102.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206678275|gb|EDZ42762.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 384

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 35/382 (9%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  E  D++ + P      +  ++   GL+               A      R Y     
Sbjct: 24  PHEEEVDRLGYVPDEIGKQIADKAHELGLYACNLPEKVGGGGLGIAQMSLIEREY----- 78

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                             + +              +       P  +        LTE  
Sbjct: 79  ------------GRTSHALQSWAARPTELLMACEGDQREKYLLPAVRGEKRELFALTEPD 126

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV----EGRVGCFLVPRL 261
            G+D+  + S  ++  D  + L+G K F+S P   D  I+ A        R     V   
Sbjct: 127 AGSDVMGMKSNARRDGDD-WILNGSKHFISGPCMPDFAIVFAATGEDETPRGPRKRVTAF 185

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           L D    G   +     +  R   T EL F N       +LG+             +  +
Sbjct: 186 LVDVGAKGFECREGTKCVSYRGYKTFELHFDNVRLGPKQVLGEEGRGLELSGKWLGMGRI 245

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                        L  A  +A  R   G  +         +AD A+ + AA  +      
Sbjct: 246 WVGATCCGKAERILDMATDWAASRKQFGKPIGAFQATGFRLADGAIQLRAADLMVKDAV- 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                 +R+E+   +   A + K +C +M   +  + ++  GG G +EE  I R +R+S 
Sbjct: 305 ------ARAEQGVMSDADAAMIKVFCSEMLCKIADDTVQIYGGMGLMEEMPIQRFWRDSR 358

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+       +   + +
Sbjct: 359 LERIWDGTSEIQRHIITRSILR 380


>gi|163746739|ref|ZP_02154096.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
 gi|161379853|gb|EDQ04265.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45]
          Length = 383

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 111/312 (35%), Gaps = 24/312 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  T     +W PK  S                     LTE + 
Sbjct: 86  ADFAFAMQGLGTGAISLFGTGEQKAEWLPKTRSG-------------QAISAFALTEPQS 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T   +   +G        W  +  +++ + + A+     G   +   +     
Sbjct: 133 GSDVANSTMTAKADGNGYVLDGRKTWISNGGIANVYTVFARTGEAPGAKGLSAFIVPADT 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL  +     +     AT  L F         LLG+          +  +     A  +
Sbjct: 193 PGLKVEERLEVMAPHPLAT--LHFDGVKLPGSALLGEAGRGFAIAMSVLDVFRSTVAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+     RHV G  L +  +++  IAD+A+D+ AA  L +R A + D   
Sbjct: 251 LGFARRALDEALARVTSRHVQGAPLSELQLVQGHIADMAVDVDAAALLVYRAAWTKDSGA 310

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R          A + K +    A  VI  A++  GG G     ++ R YRE  A  I  
Sbjct: 311 PR------VTREAAMAKLFATDQAQKVIDTAVQLHGGDGVRHGEAVERLYREIRALRIYE 364

Query: 445 GSGNAMVLDVLN 456
           G+ +   + +  
Sbjct: 365 GASDVQRVVIAR 376


>gi|260462066|ref|ZP_05810311.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032313|gb|EEW33579.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 382

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 119/369 (32%), Gaps = 31/369 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D  +   A   L+ +   DG        +  P                     A    +
Sbjct: 33  VDHHDVDAACRELVTKLGRDGWLKPTALDTDNPGPLDVRTLCITRETLARHDGLADFAFA 92

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   ++L  TP   + W  K              +         L+E R G+D+A 
Sbjct: 93  MQGLGTGALSLFGTPEQ-QQWLSK-------------TRAGKAISAFALSEPRSGSDVAN 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
                 +  DG        W  +  ++D +++ A+     G   +   L  G   GL   
Sbjct: 139 TEMTATRDGDGYVLTGEKTWISNGGIADLYVVFARTGEAPGAKGLSAFLVPGDAKGLGIA 198

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSG 327
                I         L F            +   P +  +I +             ++  
Sbjct: 199 ERLEVIAPH--PLARLSFDQVRLPASA---LIGKPGDGFRIAMSVLDVFRSTVGAAALGF 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L E+I     R + G  + +  +++  IAD+ALD+ AA  L +R A + D      
Sbjct: 254 ARRALDESIKRVAERKLFGAPMGELQMVQGHIADMALDVDAAALLIYRAAWTKDMG---- 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             AA     A + K +    A  VI +A++  GG+G  +   +   YRE  A  I  G+ 
Sbjct: 310 --AARVTREAAMAKLFATDKAQEVIDKAVQLHGGNGVRKGHIVESLYREIRALRIYEGAS 367

Query: 448 NAMVLDVLN 456
           +   + +  
Sbjct: 368 DVQKVVIAR 376


>gi|260574065|ref|ZP_05842070.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
 gi|259023531|gb|EEW26822.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2]
          Length = 402

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 128/368 (34%), Gaps = 33/368 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            + R   + GL  +     +  +     A+ + A  +  +       +   S      + 
Sbjct: 61  EIFREMGNMGLLGTTIPEEYGGLGASYVAYGLIAREVERVDSGYRSMMSVQSSLVMYPIY 120

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E+                 GLTE   G+D A + +  +K + 
Sbjct: 121 AYGSEAQRRKYLPKLATGEW-------------IGCFGLTEPDAGSDPAGMKTVARKTAG 167

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P++D F++ A+ E   G   +   + D    GL   ++  K+  R+
Sbjct: 168 GYVLNGAKMWISNAPIADVFVVWAKSEAHGGK--IRGFVLDKGMKGLSAPKIGGKLSLRA 225

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR- 341
           + T E+   +         +     VE +K     L+ A   ++   +  AE   +A R 
Sbjct: 226 SITGEIVMKDVEV----GEDALLPGVEGLKGPFGCLNRARYGIAWGVLGAAEFCLHAARQ 281

Query: 342 ----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R      L    + +  +A++  +I+       R+    DEA +       A  M 
Sbjct: 282 YGLDRKQFNRPLAQTQLYQLKLANMLTEISLGLQACLRVGRLMDEANA-------APEMI 334

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A      A +  GG+G  E+  I RH       +   G+ +   L +   
Sbjct: 335 SLIKRNNCGKALDAARAARDMHGGNGIQEDYQIMRHMVNLETVNTYEGTHDVHALILGRA 394

Query: 458 LEKGTNLF 465
           +      F
Sbjct: 395 ITGLQAFF 402


>gi|108798478|ref|YP_638675.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867579|ref|YP_937531.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768897|gb|ABG07619.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693668|gb|ABL90741.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 615

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/530 (15%), Positives = 174/530 (32%), Gaps = 78/530 (14%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           + +      E    A+ + P              V   P +    +  +           
Sbjct: 46  DRLAREDLAESFEEADRHPPVYDPSTR------SVTVTPEFAGAYKTWMDAEWWRLRVLP 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    +     A   L A       +     +A +V    T              E
Sbjct: 100 ELGGTDAPNSLNWALAEFVLGANPALWTYVGMPT-AARVVWHHGT--------------E 144

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
            D        +      + LTE   G+D+ A  ++     DG + + G K F+++   D 
Sbjct: 145 RDRKIAQIGVEKRWGATMVLTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDL 204

Query: 243 -----FIMLAQV----------EGRVGCFLVPRLLED-------GSPNGLCYQRLKNKIG 280
                 ++LA+              +  FLVP+   D       G  NG+    ++ K+G
Sbjct: 205 ADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHFDPDTGELTGERNGVYATNVEKKMG 264

Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              + T EL   +     G+LLG+++     + ++     +     +++ +      A+ 
Sbjct: 265 MNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVIEDARMMVGCKAIATLSSGYLNALD 324

Query: 338 YARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           YA++R                  +   P ++R++           +L    A+  DE   
Sbjct: 325 YAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAV 384

Query: 386 RS---EEAAYARI----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRES 437
           ++   E+AA A      + PI K +  + +  V+  E+++  GGSGY+ E  I ++ R++
Sbjct: 385 KTAAGEDAALAEAVNDLLLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDA 444

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK--VITILRDSISL 493
             +++  G+       L    ++   +     L   ++    +S     +    R     
Sbjct: 445 KIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDEVKAFAAASDPASPITGERRLLGDA 504

Query: 494 CKEDKGLARFLTEKIALASSAA-ALYRAGMNDIADVFLENRFLDNCHSTH 542
               + +   +T  +A +   +  +YR G+N         R L       
Sbjct: 505 VSNVEAIVAKMTGDLAASKDESTTVYRVGLN-------ATRLLFALGDVF 547


>gi|268574352|ref|XP_002642153.1| Hypothetical protein CBG18107 [Caenorhabditis briggsae]
 gi|187025155|emb|CAP35621.1| hypothetical protein CBG_18107 [Caenorhabditis briggsae AF16]
          Length = 409

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/382 (18%), Positives = 143/382 (37%), Gaps = 27/382 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+K   +PA H + +     G+        F    R  +  I  A      
Sbjct: 42  EKINPNVAQWEKSGRYPA-HYVFKMFGQLGVFAVNKPVEFGGTGRDFSMSIAVAE----- 95

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q+ A    S  + S  +   M+TP + +       S         P     +   + ++E
Sbjct: 96  QIGAVDCGSIPM-SVMVQTDMSTPALAQFG-----SDFLRNRFLRPSINGDLVSSIAVSE 149

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D++AI +  ++    +       W  +   +D   +L               +  
Sbjct: 150 PHAGSDVSAIRTYARRYGTDLIINGSKMWITNGDQADWACVLVNTSNEKNLHKNKSLICI 209

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDS 320
                G+      +K+G RS+ TV+L F +      +++G+                L +
Sbjct: 210 PLDTPGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFSYQMKQFNDERLVT 269

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR--LAN 378
             + +  ++  + E I YAR R + G  L+DQ  ++  +A++  ++ A  +L +R  LA 
Sbjct: 270 VAVGLLPLQKCINETIEYARERSIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVLAR 329

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             DE            ++  + K    ++A  V  + ++  GG+GY+ +  I+R +R+  
Sbjct: 330 CQDED---------VSMLTAMAKLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFR 380

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             SI  G    M+  +     K
Sbjct: 381 IFSIGAGCDEVMMQIIHKTQSK 402


>gi|157136755|ref|XP_001663829.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108869864|gb|EAT34089.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 421

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 110/313 (35%), Gaps = 36/313 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK             M K  +    GLTE   G+D +++
Sbjct: 129 SSLCMGAIYDYGSEEQKQKYLPK-------------MAKGELIGCFGLTEPNHGSDPSSM 175

Query: 215 TSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++                 W  +SP++D  I+  +  +GRV  F+V R   + S  GL 
Sbjct: 176 ETRAVHDPRTKTYVLTGSKTWITNSPVADVCIVWGKTEDGRVRGFIVDR---EQSSTGLS 232

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             +++ K   R++ T  +            L      V  M+     L++A   ++   +
Sbjct: 233 TPKIQGKFSLRASDTGMILMDEVRIPEDNILP----NVSGMRGPFGCLNNARYGIAWGAL 288

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE     A  Y   R      L    +M++ +AD+  +I+        +    D+   
Sbjct: 289 GAAESCLKVARQYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLTACLHVGRLKDQKLH 348

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E       M  + K      A  +   A + +GG+G  +E  I RH     A +   G
Sbjct: 349 TPE-------MISMLKRNNAGKALEIARVARDMLGGNGIADEYHIIRHVMNLEAVNTYEG 401

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   +
Sbjct: 402 THDIHALILGRAI 414


>gi|218781028|ref|YP_002432346.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762412|gb|ACL04878.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 380

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 126/390 (32%), Gaps = 35/390 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           A +A    P +  +       D +     W  L R    +G  C+   + +        +
Sbjct: 19  AYLAENVIPHIPQWEA-----DHIVPPEVWRDLGR----NGYLCTATPKEYGGHGMDFLY 69

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +               L   S      +    T    K + P   +             
Sbjct: 70  SVIITEEIGKTGFCGLTLGLHSDIVVPYIETFGTEEQKKKFLPGCVTG------------ 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 + +TE   G+D++++++   +  D    + G K F+S+ ++    ++A  +  V
Sbjct: 118 -DTITSVAMTEPGTGSDLSSMSTTAVEDGDD-IIIDGTKTFISNGINTNLCVVAARDPEV 175

Query: 254 GCFL--VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVE 310
                 +   L +G   G    R  +K+G  S  T EL FS         L     G + 
Sbjct: 176 SNPYEAISLYLVEGDRPGFERGRHLDKMGFNSQDTSELFFSKCRIPKENLLGQKGGGFII 235

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+ L    L  AI +V    +     I Y +    +G  L     ++  + ++A +   
Sbjct: 236 LMQKLQQERLICAIGAVVAAEMMTERMIQYCKETTRNGKPLSKFQAIQFELVEMATEAKL 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
             A   +L       +    E + A       KYW   +A   I  A+  +G     E  
Sbjct: 296 GRAFLDKLIAEHVAGEQVVVEVSMA-------KYWTTDLAKRTIDRAISIVGEPAMAESL 348

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+  R+     I  G+   M +     +
Sbjct: 349 GLAQAMRDIRILPIFAGTNEVMKIVAARFM 378


>gi|271970235|ref|YP_003344431.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270513410|gb|ACZ91688.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM
           43021]
          Length = 385

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 126/370 (34%), Gaps = 31/370 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W +    PA   L       G+     +      +   ++ +    L          + 
Sbjct: 36  DWFEEAVFPA-RELGPVLGSLGVLGMHLEGYGCAGLDAVSYGVACRELEAGDSGLRSFVS 94

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                +   +    +    ++W P++ + E                  GLTE   G+D A
Sbjct: 95  VQGSLAMFPIWKYGSAEQKEEWLPRMAAGE-------------AIGCFGLTEPDHGSDPA 141

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            + +  ++ + G + L+G K ++++  ++D  ++ AQ E  +  F+VP         G  
Sbjct: 142 NMRTHAKQDASGDWILNGAKMWITNGSIADVAVVWAQTEDGIRGFVVPT-----DTPGFS 196

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              +  K+  R++ T  L F +       +L  +    GP+  +            V   
Sbjct: 197 APEIHKKMSLRASVTSSLYFDDVRLPASAVLPGVRGLKGPLSCLS-EARFGILWGVVGAA 255

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  L  A+ YA  R   G  +    + +  +A + + +  +   +  L    D      +
Sbjct: 256 RACLEAAVGYATTRVQFGKPIGGFQLTQEKLAWMYVGLGQSQLTALHLGRLKDAGTLTPQ 315

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + ++ ++          + A  +   +   +GG+G   E  + RH     +     G+  
Sbjct: 316 QVSFGKLA-------NVRAALDIARRSRAILGGNGITLEYPVIRHMTNLESVLTYEGTEE 368

Query: 449 AMVLDVLNLL 458
             +L +   L
Sbjct: 369 IHLLTLGRAL 378


>gi|119385565|ref|YP_916620.1| Acyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
 gi|119376160|gb|ABL70924.1| Acyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
          Length = 551

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 131/371 (35%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F  +   +A  +          +  G L + S  +A ++  
Sbjct: 203 EIIEELAELGVFGLTIPEEFGGLGLSKASMVVVTEELSRGYIGVGSLGTRSEIAAELILC 262

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W P + S E   T                TE   G+D+ ++ ++  +  + 
Sbjct: 263 GGTEAQKAKWLPGLASGEILSTAV-------------FTEPNTGSDLGSLRTRAVRDGED 309

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +    +LA+ +        +   L +  P          G+    
Sbjct: 310 WVVTGNKTWITHAQRTHVMTLLARTDPETTDWRGLSMFLAEKEPGTDDDPFPTPGMTGGE 369

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           ++  +G R     EL F    GF +   N+  G P    K L+       + +A  +V  
Sbjct: 370 IE-VLGYRGMKEYELGFD---GFRIKGENLLGGEPGRGFKQLMETFESARIQTAARAVGV 425

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +    + YA  R   G  LI+ P +   +A +A++I  A  L++  A   D  +   
Sbjct: 426 AQSAAEIGMRYAVDRKQFGKSLIEFPRVADKLAMMAVEIMIARQLTYFSAWEKDHGRRCD 485

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++         ++A A    A++  GG+G+  E +I+R   ++   +I  G+ 
Sbjct: 486 LEAGMAKLL-------GARVAWAAADNALQIHGGNGFALEYAISRVLCDARILNIFEGAA 538

Query: 448 NAMVLDVLNLL 458
                 +   L
Sbjct: 539 EIQAQVIARRL 549


>gi|297620687|ref|YP_003708824.1| putative Acyl-CoA dehydrogenase family protein [Waddlia
           chondrophila WSU 86-1044]
 gi|297375988|gb|ADI37818.1| putative Acyl-CoA dehydrogenase family protein [Waddlia
           chondrophila WSU 86-1044]
          Length = 563

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/470 (17%), Positives = 155/470 (32%), Gaps = 43/470 (9%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEA 148
                D+    P    +L+     G+      + +  +   Q A+     R+       A
Sbjct: 66  NAAEIDRQAQIPD--EVLKGLADMGVLGMTVPKEYAGLGMSQRAYCKVTDRIARQCGSTA 123

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +          + L  T    + W P +              K        LTE   G
Sbjct: 124 LFINVHQSIGLKALLLFGTEEQKEKWLPDL-------------AKGKKYAAFSLTEPNAG 170

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL---VPRLLE 263
           +D   + ++     +   Y ++G K + ++  ++D   ++A+ E      +   V   L 
Sbjct: 171 SDANGVETKAVYDPEKKVYRINGLKQWTTNGSIADILTVMAKTEVETKEGVQERVTAFLV 230

Query: 264 DGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
                G   + +  +K+G R   T  L F++        L    G ++    L  LD   
Sbjct: 231 TPDMPGFIVRDKALDKLGTRGAWTANLAFNHLEVPEENILGPLGGGLK--VCLTLLDYGR 288

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            +   M    A       + +AR R+     L    ++K+ IA I   + A  A ++  A
Sbjct: 289 TTFGAMCTGAARELVQLGVKHARERYQFKRPLASFSLVKKKIAKICSLLYAMDASTYLTA 348

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D             + + I K +       +I E M+ +GG  +  ++   R  R++
Sbjct: 349 GLIDSGVEDI------MLESAILKVFTSDALWEIIYEVMQILGGRSFFTDQPYERMMRDA 402

Query: 438 PANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-C 494
             N I  GS   +   +  + +   G  L + +FS   +         I +    +S   
Sbjct: 403 RLNMIGEGSNEVLRAFIGAVGMRGLGVELQKGVFSNAGKLFSRLFLPAIPVRSQRLSKEA 462

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCM 544
           KE   + R L        SA  L + G + +      NR      S + M
Sbjct: 463 KELAAVLRKLHWY-----SAGLLAKHGEDIVECQLQLNRIASIAMSVYTM 507


>gi|310800741|gb|EFQ35634.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 541

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/439 (18%), Positives = 149/439 (33%), Gaps = 44/439 (10%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            +   N Y       A    + +  H  L            +E     N   P +  +  
Sbjct: 122 PYADPNWY------QAYHTPYYNETHAALR--------AEIREWVE--NNVEPYVTEWD- 164

Query: 90  GGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                +K E  P+ +  +  R    GL    +   +                + M   + 
Sbjct: 165 -----EKKEVDPSIYKQMGERGYLAGLLGVHYPTQYTKNTVASVDPKDWDLFHEMLLTDE 219

Query: 149 GHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +      +++       P + K     +  R         +      I L +TE  
Sbjct: 220 LSRAASGGFVWNVIGGFGIGCPPLVKFGQKALVDR-----ILPGILDGDKRICLAITEPD 274

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+A +T + +   DG  + ++G K ++++ +   +   A   G  G   V  LL + 
Sbjct: 275 AGSDVANLTCEAKLSEDGKHFIVNGEKKWITNGIWCDYFTTAVRTGGEGMNGVSLLLIER 334

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
            P G+  +R+ +  G  S+ T  + F +       LLG  N     +        +   I
Sbjct: 335 GP-GVTTRRM-DCQGVWSSGTTYITFEDVKVPVENLLGKKNQGFRVIMTNFNHERIGIII 392

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   RV   E++ YA +R   G  LI+ PV++  +A +A  I A+ A    L N   +
Sbjct: 393 QCIRFSRVCYEESVKYANKRRTFGKKLIEHPVIRLKLAHMARQIEASYAW---LENLIYQ 449

Query: 383 AKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRES 437
            +   +  A  ++   I   K            EA +  GG  Y        + R YR+ 
Sbjct: 450 CEKMGDTEAMLKLGGAIASLKAQATVTFEFCAREASQIFGGLSYSRGGQGGKVERLYRDV 509

Query: 438 PANSILLGSGNAMVLDVLN 456
            A +I  GS   M+   + 
Sbjct: 510 RAYAIPGGSEEIMLDLSIR 528


>gi|319942708|ref|ZP_08017014.1| acyl-CoA dehydrogenase domain-containing protein [Sutterella
           wadsworthensis 3_1_45B]
 gi|319803718|gb|EFW00659.1| acyl-CoA dehydrogenase domain-containing protein [Sutterella
           wadsworthensis 3_1_45B]
          Length = 384

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 130/372 (34%), Gaps = 30/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+   +P     ++    +G+           +     +  +   +  +A+  A   +  
Sbjct: 35  DEEGKYP--REFVKALAENGISLLGVPEEHGGI--PADYVTQMLAIMEIAKCGAPAFLMT 90

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +      +    +P   +             T ++       A  L LTE   G+D  A 
Sbjct: 91  NGQCMHSMIHFGSPEQLR------------LTAESTSTTGDPAYSLALTEPGAGSDNNAA 138

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEG-RVGCFLVPRLLEDGSPNGLCY 272
           T+  ++  DG   ++G K F++      + ++LA+                D    G+  
Sbjct: 139 TTTWERK-DGKIVINGQKTFITGAAEYPYMLVLARDPKCEDPKLAFSLFWVDAKAPGVKI 197

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMR 329
             L +KIG    +T E+   N        +     G +  M    +  L +A        
Sbjct: 198 NPL-HKIGWHLVSTCEVYLDNVVVEEKDMVGEEGKGFLNVMYNFEMERLINASRCTGFAE 256

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  +A  YA +R   G  +    +++  +A + +       L    A   D  +S  E 
Sbjct: 257 CAFEDAARYANQRIAFGKPIGFNQMIQEKLALMKVKCMNMRHLVLSCAVQADRKESMRET 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K +C + A  VI +A++ +GG GY  +  ++R +R+     I  G+   
Sbjct: 317 AALA-------KLYCARTALEVIDDAIQIMGGLGYTNDARVSRLWRDVRCERIGGGTDEI 369

Query: 450 MVLDVLNLLEKG 461
           M+      + K 
Sbjct: 370 MIYIAGRQILKA 381


>gi|189202082|ref|XP_001937377.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984476|gb|EDU49964.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 553

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 135/379 (35%), Gaps = 18/379 (4%)

Query: 93  RWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            WD+ +  P   +  +  R    G+    + + +  +  K     +    + M   +   
Sbjct: 173 DWDEAKKVPDEIFLEMGERGYLAGMLGIQYPKDYTDLRVKCVPPEKWDHFHEMIITDELS 232

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                     ++              K   +E        +      I L +TE   G+D
Sbjct: 233 RTGSGGLVWGLIGGYGIGGPPLF---KFGKKELIQRIGPDLLSGKKRICLAITEPDAGSD 289

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           +A +T + +   DG  Y ++G K ++++ +   +   A   G  G   V  LL + S  G
Sbjct: 290 VANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGGEGMNGVSLLLIERSAGG 349

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  +++ +  G  S+ T  + F +    +   +G +N     +        +   I  + 
Sbjct: 350 VSTRKM-DCQGVWSSGTTYITFEDVKVPVENVIGKVNQGFKVIMTNFNHERIGIIIQCLR 408

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             RV   E++ YA +R   G  LID PV++  +A +A  I A+        N   + +  
Sbjct: 409 FARVCYEESVKYAHKRKTFGKRLIDHPVIRLKLAHMARQIEASYNWME---NLIFQCEKM 465

Query: 387 SEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANS 441
           ++  A  ++   I                EA +  GG  Y        + R YR+  A +
Sbjct: 466 NDMEAMLKLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRGGQGAKVERLYRDVRAYA 525

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  GS   M+   +    +
Sbjct: 526 IPGGSEEIMLDLSIRQALR 544


>gi|118464348|ref|YP_882491.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254775754|ref|ZP_05217270.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118165635|gb|ABK66532.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 609

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/490 (16%), Positives = 165/490 (33%), Gaps = 78/490 (15%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +      E    A+ N P    + P       +         +      G        
Sbjct: 46  ARLAEGPVAETFAFADRNPPV---FDPAEH---AITVPEELAKTVAALKEAGWWRLGMAE 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +         A    L+    + +        +  + L       + WA +   R 
Sbjct: 100 EIGGMPAPPP-LAWAVNEMLICANPSANFFCLGPFMSQALYLEGN-EQQRRWAAEGVERG 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +             A  + LTE   G+D+ A  ++  +  DG + + G K F+S      
Sbjct: 158 W-------------AATMVLTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGD 204

Query: 243 ------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSN 284
                  ++LA+ EG       +  F VP+ L D      G  NG+    +++K+G +S+
Sbjct: 205 TAENIFHLVLARPEGAGPGTKGLSLFYVPKYLFDPETFELGPRNGVFVTGVEHKMGIKSS 264

Query: 285 ATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            T EL F        G+L+GD++     +  +     +   + +   +      A+ +A+
Sbjct: 265 PTCELTFGATDVPAVGYLVGDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALAFAK 324

Query: 341 RRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------ 382
            R                  +I  P ++R++           AL    A   D+      
Sbjct: 325 ERVQGADLTQMADKTAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRV 384

Query: 383 -AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                        ++ PI K    + A  V+ E+++ +GGSG++++  + ++ R+S  +S
Sbjct: 385 SGADHDMAHRVDDLLLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDS 444

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           +  G+     LD               F  + +D G + + V   +  ++  C E     
Sbjct: 445 LYEGTTAIQALDF-------------FFRKIVRDRGQALQFVTAQITATVDDCDEA---L 488

Query: 502 RFLTEKIALA 511
           R + E +  A
Sbjct: 489 RPIAELLQTA 498


>gi|226365576|ref|YP_002783359.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244066|dbj|BAH54414.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 380

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 128/393 (32%), Gaps = 39/393 (9%)

Query: 70  AQELARMANYNTPQLHAYGP---GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           A  +A      +            GE       H     L  +    G         ++ 
Sbjct: 13  AAAIADFCKRESGTREQRDRLTNHGE-------HNHNQDLYEKMAKLGWLGITIPEEYDG 65

Query: 127 VVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +H      L   A+  A    + P++ +    A   T          I +     
Sbjct: 66  SA--ASHVDMCILLEEAAKGMAPIGGIGPTLITGGAYAKFGTDAQKDVVLRGIVAGR--- 120

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                      +  + ++E   G+D+  ++++ +K +DG        W  ++   D  ++
Sbjct: 121 -----------SQSISMSEPEAGSDVGNLSTRAEKTADGWVINGQKTWCSNAHFCDNILL 169

Query: 246 LAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301
           +A+   G      +          GL    + + +G +     +L F++       ++G+
Sbjct: 170 VARTGRGDGKHEGLTMFHVPADTTGLKISGI-DTMGGKEVN--DLYFTDCVLPEDAVVGE 226

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           +      +        L  A M +   + + A+ + +  +R   G  +     ++  IAD
Sbjct: 227 VGNGWRQLMTGLNFERLILAAMMLGTAQRAFADTLDFVTQRKQFGRPVGSFQALRHRIAD 286

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +A +I     L + +A   D               A + K    + A  V  E M+ +GG
Sbjct: 287 LATEIECCKLLVYSVAKDVDANP-----GKMLAREASMAKLKVTETAKKVALEGMQMMGG 341

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GY  E  + +H R +  +SI  G+       +
Sbjct: 342 YGYATEFDMEKHVRSTIVSSIYGGTNEIQRDII 374


>gi|163732511|ref|ZP_02139956.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
 gi|161393871|gb|EDQ18195.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149]
          Length = 387

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 103/294 (35%), Gaps = 16/294 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 102 CEGDQIERYLMPAVRGERMDALAMTEPGAGSDVRGMKCAAVRKG-GDWVVNGTKHFISGA 160

Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
               FI++    G           +   L D    G   +     + +R    + L+F +
Sbjct: 161 DHADFIIVFIATGEDQTAKGPKKRITAFLVDRGTPGFTIRDGYKSVSHRGYKNMILDFDD 220

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LGD++     +        +  A MSV   R     A++YA  R   G  + 
Sbjct: 221 CRLPDAQVLGDVDGGFEVMNTWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQKIG 280

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A+  D+          A       K +  +M   
Sbjct: 281 KFQGVSFQLADMVTEIDAADLLTLAAADRLDKGLP-------ANREIASAKLYASEMLAR 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           V   A++  GG G +++  + R +R++    I  G+       +   L +    
Sbjct: 334 VTDAAIQIHGGMGLMDDYPLERFWRDARVERIWDGTSEIQRHIISRDLLRALGA 387


>gi|111023073|ref|YP_706045.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822603|gb|ABG97887.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 380

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 124/360 (34%), Gaps = 29/360 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTS 158
           H     +  +    G         ++      +H      L   A+  A    + P++ +
Sbjct: 39  HNHNQDVYEKMAKLGWLGITIPEEYDGSA--ASHVDMCILLEEAAKGMAPIGGIGPTLIT 96

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
               A   T          I +                +  + ++E   G+D+  ++++ 
Sbjct: 97  GGAYAKFGTDAQKNVVLRGIVAGR--------------SQSISMSEPEAGSDVGNLSTRA 142

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +K +DG        W  ++  +D  +++A+   G      +          GL    + +
Sbjct: 143 EKTADGWVINGQKTWCSNAHFADNILLVARTGRGDGKHEGLTMFHVPADTAGLKISGI-D 201

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G +     +L F++       ++G++      +        L  A M +   + + A+
Sbjct: 202 TMGGKEVN--DLYFTDCVLPEDAVVGEVGNGWRQLMTGLNFERLILAAMMLGTAQRAFAD 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + +  +R   G  +     ++  IAD+A +I     L + +A   D    +        
Sbjct: 260 TLDFVTQRKQFGRPVGSFQALRHRIADLATEIECCKLLVYSVAKDVDANPDK-----MLA 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K    + A  V  E M+ +GG GY  E  + +H R +  ++I  G+       +
Sbjct: 315 REASMAKLKVTETAKKVALEGMQMMGGYGYATEFDMEKHVRSTIVSTIYGGTNEIQRDII 374


>gi|254281716|ref|ZP_04956684.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
 gi|219677919|gb|EED34268.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR51-B]
          Length = 392

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 142/394 (36%), Gaps = 36/394 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
            Q L   A  + PQL A+       +  +       L+      G            V  
Sbjct: 20  VQTLDEWAKAHLPQLTAH-------EHEDLDGTCRRLVTALGEAGFTRYAVPAGAGGVYE 72

Query: 130 KQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
           K   +        +A+  A      +     +  ++L  T +  +D+             
Sbjct: 73  KLNVRSLCLIRETLARHNALADFAFAMQGLGSGPISLFGTEQQQQDYL------------ 120

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
            A + + S      L+E   G+D+AA+  + +   DG        W  ++ ++D + + A
Sbjct: 121 -ADVAEGSKISAFALSEPNAGSDVAAMECRAEAEGDGFILNGTKTWISNAGIADFYTVFA 179

Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-S 305
           + +  + G   +   +      G       + +      T  L+F++ +      +    
Sbjct: 180 RTDPTLEGAKGISCFIVPADTPGFEVSERIDLVAPHPLGT--LQFTDCYLPAKQLVGEQG 237

Query: 306 TGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    M  L       A  ++   R +L   + +  +R + GG L+D P+++  + D+A
Sbjct: 238 RGFAIAMATLDVFRSTVAAAALGMARCALDATLDHIGQRDIFGGKLVDLPLVQAKVGDMA 297

Query: 364 LDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           L I ++  L +R A + D  A+  + EAA A++ A        + A  VI  A++  GG 
Sbjct: 298 LAIDSSALLVYRAAWTKDCVAERVTREAAMAKLAA-------TESAQQVIDSAVQLHGGK 350

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  +   +   YR+  A  I  G+       +  
Sbjct: 351 GVTKGNIVESLYRDIRALRIYEGASEVQQTIIAR 384


>gi|219670602|ref|YP_002461037.1| acyl-CoA dehydrogenase [Desulfitobacterium hafniense DCB-2]
 gi|219540862|gb|ACL22601.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 380

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 14/286 (4%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E        +++  V   +G TE + G+D +AI +   +  +G   L+GHK F+S  +
Sbjct: 101 SEEQKKITMHYVKQGQVPFCIGFTEPQAGSDTSAIQTTYTRR-NGKVYLNGHKTFISGAL 159

Query: 240 SDAFIM-LAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++ +++ +A+  +               S  G+  ++L +KIG     T E+   N    
Sbjct: 160 TNPYLLCMARNCDETDKTKAFTMWWVPMSAPGIKVEQL-HKIGWHMLETCEIYLENVEVE 218

Query: 298 LLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               +     G ++ MK      L  A   +     +  +A+ YA +R   G  +    +
Sbjct: 219 EKDIVGQEGHGFLQLMKNFETERLLMAATILGMAECAFEDAVRYANQRVQFGKPIGTFQL 278

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  I  +AL I     L ++ A   +   S         I + +TK +C +    +I +
Sbjct: 279 IQEKITYMALKIENMRNLIYKTAWEKENGISTQ-------ITSALTKLYCAQSGNEIIDD 331

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A++ +GG GY  +  I+R +R++    I  G+   M+      + K
Sbjct: 332 ALQIMGGIGYTNDCRISRLWRDARNYRIGGGTDQVMIHIAGRNILK 377


>gi|289740975|gb|ADD19235.1| glutaryl-CoA dehydrogenase [Glossina morsitans morsitans]
          Length = 420

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 127/341 (37%), Gaps = 34/341 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           P V   A+ + A  +  +       L   S  +   +    + ++ + + P++       
Sbjct: 98  PGVSNVAYGLLAREIERVDSAYRSALSVQSSLAMGAIYDFGSDKLKEKYLPQL------- 150

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAF 243
                  +  +    GLTE   G+D   + ++ +  ++           W  SSP++D  
Sbjct: 151 ------AQGKLIGAFGLTEPNHGSDPGGMETRAKYDNESKCFILNGSKSWITSSPIADVL 204

Query: 244 IMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           I+ A+  +G+V  FLV R   + S  GL   +++ K   R++ T  +   +       + 
Sbjct: 205 IIWAKGEDGKVRGFLVDR---EQSKKGLSTPKIEGKFSLRASITGMILMDDLHVP---EE 258

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357
           N+    V  +     L++A   ++   +  AEA       Y   R   G  L    ++++
Sbjct: 259 NLLPNVVGFVGPFTCLNNARYGIAWGALGAAEACVEIARQYVLDRKQFGRPLAANQLIQK 318

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD + DIA       ++    ++     E       M  + K      A  +     +
Sbjct: 319 KLADASTDIALGLQACLQVGRLKEKKLHTPE-------MISMIKRNNAGKALEIARVMRD 371

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG+G  +E  I RH     A +   G+ +   L +   +
Sbjct: 372 VLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALILGRAI 412


>gi|183222662|ref|YP_001840658.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912694|ref|YP_001964249.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777370|gb|ABZ95671.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781084|gb|ABZ99382.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 558

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/422 (19%), Positives = 151/422 (35%), Gaps = 45/422 (10%)

Query: 57  ELELLGEYVLSCTAQEL-ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +L   G Y LS   +       ++    +  +     R D +      + L       GL
Sbjct: 148 DLGHFGAYGLSEDHENFRGIFKDFAENVVVPHAEHVHRHDDLIPQEIINGLKDMGC-FGL 206

Query: 116 HCSIWDRSFEPVVRKQ--AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
                    +P  R    +  +    L   +   AG L++     +  +    T      
Sbjct: 207 CIPEQFGGIQPDDRPDNISMLVVTEELSRGSLGAAGSLITRPEIMSKALLKGGTEEQKNK 266

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P + S E                G+ +TE   G+D+A ++   +++  G        W
Sbjct: 267 WLPLLASGE-------------KFAGIMVTEPNYGSDVAGVSVTAKEVEGGFVINGVKTW 313

Query: 234 FLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDG------------SPNGLCYQRLKNKI 279
              +  ++  ++L + E         +  LL +                G    +    I
Sbjct: 314 CTFAGYANLLLILCRTEADPSLKHRGLSILLAEKPSFDGHEFSYKQEGGGSIQGKAIGTI 373

Query: 280 GNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
           G R   + E+ F + F      L GD     G    M+      + +A  +   M+ +L 
Sbjct: 374 GYRGMHSYEVSFEDYFVPKENLLGGDAGRGKGFYFQMEGFAGGRIQTAARANGVMQAALE 433

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ Y++ R V    + D  + K  IA +A+ + A    +  +A   D+ K + E     
Sbjct: 434 AALRYSQERKVFAKPIYDYTLTKFKIAKMAMIVQATRQYTNYVATLLDDHKGQME----- 488

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K +  K+A  V  EAM+  GG GY EE  ++R++ ++   SI  G+   M L 
Sbjct: 489 ---ATLVKLYASKIAEWVTREAMQIHGGMGYAEEYPVSRYFVDARVFSIFEGAEEVMALR 545

Query: 454 VL 455
           V+
Sbjct: 546 VV 547


>gi|15558979|gb|AAL02074.1|AF320254_4 putative acyl-CoA dehydrogenase [Azoarcus evansii]
          Length = 401

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/388 (20%), Positives = 132/388 (34%), Gaps = 28/388 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHL 151
            D  +   A   L+      G        +F   + +   +        +A  +  A   
Sbjct: 32  IDHHDTDAACRRLVAALGRAGFLRYCVPAAFGGALPELDSRALCVARETLAYHDGLADFA 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +     +  + L  +P + +   PK+ S E+                  LTE   G+D+
Sbjct: 92  FAMQGLGSGAITLAGSPELQRRVLPKVASGEW-------------IAAFALTEPEAGSDV 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AAI +  +   D         W  +  ++D + + A+     G   +   +      G  
Sbjct: 139 AAIATTARADGDHYVLDGEKTWISNGGIADVYCVFARTGDAPGTRGLSAFVVTSDMPGFE 198

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGM 328
                + I         L F+         L     G    M+ L       A  ++   
Sbjct: 199 VAERLDVIAPH--PLARLRFNGLRVPAENRLGASGEGFKIAMRTLDIFRASVAAAALGFA 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRS 387
           R +L EA+ +A+ R + G  L D  + +  + ++A DI AA  L+ R A   D AK   +
Sbjct: 257 RRALDEALTHAQGRAMFGHTLADFQLTQAKLGEMATDIDAAALLTARAAWQRDVAKRPTT 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E A A++ A        + A  VI  A++  GG G      +   YRE  A  I  G+ 
Sbjct: 317 REPAMAKMTA-------TENAQRVIDAAVQMHGGQGVRVGVKVESLYREIRALRIYEGAT 369

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
               L V   L K         ++ E D
Sbjct: 370 EVQKLIVARELMKQPAPSAARKASPEGD 397


>gi|91779810|ref|YP_555018.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91692470|gb|ABE35668.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 402

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/316 (20%), Positives = 116/316 (36%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 97  ADFALAMQGLGSGAISLGGTHEQKTRYLPRV-------------ANGTAIAAFALSEPEA 143

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+T   ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 144 GSDVAAMTLSAREDGDAYVLDGDKTWISNGGIADFYVVFARTGEAPGARGISAFVVDADT 203

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+         L     G    M+ L       A  S
Sbjct: 204 PGLEIAERIDVIAPH--PLARLHFAGARVPRSQMLGAPGEGFKLAMRTLDIFRTSVAAAS 261

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE +  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 262 LGFARHAMAEGVARAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 321

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 322 NVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGTAVEMLYREIRALRIYE 374

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 375 GATEVQQLIVGRDLLK 390


>gi|170700525|ref|ZP_02891528.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170134559|gb|EDT02884.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 384

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 118/356 (33%), Gaps = 28/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  RS   GL     D   +      +          +      +++ P   +  M+  
Sbjct: 50  RLDERSRQLGLWGL--DAPVDAGGSDLSAVAMVGVNEAIGTTVTPYVLPPDSPNLRMLCD 107

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    +              AP  +      + ++E   G+D  A+++  ++  DG
Sbjct: 108 SADDAQRARYL-------------APYARGVTRSAMAISEPGAGSDPGALSTTAERNGDG 154

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W   +  +D  I++A  +   G    +   + +    G   +R    IG   
Sbjct: 155 WVLNGRKIWISHASEADWTIVMALTDRSKGKRGGISAFIVERDTPGFIIERRIPMIG--G 212

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            +T E+   N       LLG       P++       L+ A   +     ++A    YA+
Sbjct: 213 LSTYEIVLENCRLPATQLLGREGEGFVPMQGRLSNRRLEMAAWCIGRAERAVALLCEYAK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L ++  ++  +AD    I A   +++  A   D  +        AR    + 
Sbjct: 273 QRTTFGVPLAERQAVQWWVADALTRIHACRLMTYEAAARVDAGQD-------ARTQISMV 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  +MA  VI  AM+ +G  G  +E  + +   E+    I  G        V  
Sbjct: 326 KVFATEMAWTVIDHAMQTLGAMGMTKELPLQQMASEARLMRIFEGPSEVHRWVVAR 381


>gi|162450263|ref|YP_001612630.1| glutaryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161160845|emb|CAN92150.1| Glutaryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 370

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 109/318 (34%), Gaps = 24/318 (7%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +      +   +    +    + W PK             M    +    GLTE   G+
Sbjct: 75  FVSVQGSLAMYPIWKYGSEAQKQRWLPK-------------MAAAELIGCFGLTEPDSGS 121

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D +++ ++ +K            W  S+P++D  ++ A+V+   G   +   + +    G
Sbjct: 122 DPSSMKTRARKDGSAYVLTGTKMWITSAPIADLCVVWAKVDDG-GAESIRGFVVERGMKG 180

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
           L    +  K+  R++ T E+  +         L    G    +  L       A  ++  
Sbjct: 181 LETPLIHGKMSLRASPTGEIVLNEVRVPEENVLPGVVGLKGPLGCLTQARFGIAWGALGA 240

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     A+ YAR R   G  +  + +++  + ++A +IA    ++       D      
Sbjct: 241 ARACYETAVSYARERVQFGQPIASRQLIQSELVEMATEIAKGQLMALHFGRLKDT----- 295

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                + +   + K      A  +   A   +G +G + +  + RH     +     G+ 
Sbjct: 296 --TGISPVQVSLCKRNNVGWALKIARTARGVLGANGILLDYPVIRHMLNLESVYTYEGTD 353

Query: 448 NAMVLDVLNLLEKGTNLF 465
               L + N +  G N F
Sbjct: 354 EVHCLILGNAIT-GHNAF 370


>gi|76803447|ref|YP_327716.1| acyl-CoA dehydrogenase 8 [Natronomonas pharaonis DSM 2160]
 gi|76559262|emb|CAI50870.1| acyl-CoA dehydrogenase 8 [Natronomonas pharaonis DSM 2160]
          Length = 387

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 117/356 (32%), Gaps = 23/356 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ +    G +    +    P V + A+ +    L                     +  
Sbjct: 46  DLIPKMGELGFYAPNLEGYGSPNVSETAYGLLMQELEACDSGLRSMASVQGALVMYPIHA 105

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W P +   E                  GLTE   G++  A+ +Q +K  D 
Sbjct: 106 YGSEAQKEEWLPALGQGE-------------AVGCFGLTEPEHGSNPTAMETQAEKDGDE 152

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +SP++D  ++ A+ +       V   L +   +G+   ++  K+  R++
Sbjct: 153 YVLNGSKTWITNSPIADVAVVWAR-DTSADDTPVRGFLVETDRDGVTTNKIDEKLSLRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
            T E+   N        L    G    +  L       A  ++   R     A  YA  R
Sbjct: 212 ITGEIGLQNVRVPETNVLPEVEGMKGPLSCLTQARYGIAWGAIGAARDCFETAREYATDR 271

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    + +  +A++A  I+ A  L+ RLA   +                 ++K 
Sbjct: 272 EQFGTPIGQFQLQQDKLAEMATQISLAQLLAHRLAELKERGD-------MRPQHVSMSKR 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +MA      A E +GG+G   + S  RH           G+ +   L +   L
Sbjct: 325 NNVRMARNQSRIAREMLGGNGITADYSPMRHMANLETVYTYEGTHDIHTLILGEDL 380


>gi|255039418|ref|YP_003090039.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254952174|gb|ACT96874.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 452

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 128/368 (34%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+  +F     AL+ R    GL    +  +    + +    +  AR+       +     
Sbjct: 104 WNNAQFPMHIIALMARLNICGLTYQGYGCAGRSALLEGFIAMEMARVD---SSISTFFGV 160

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + L  +    + W P              MQ+  +    GLTE   G+  A 
Sbjct: 161 HSGLAMGSIYLCGSEEQKQQWLP-------------VMQRMELIGAFGLTEPEVGSGAAG 207

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +T+  +K  D        KW  ++  SD  I+ A+  G          +      G   
Sbjct: 208 GLTTTCKKEGDEWVINGQKKWIGNATFSDITIIWARDLGDNQVKG---FIVKKENPGFKA 264

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           +++++K+  R+     +  ++        L  +    +   +  +     A  +V   R 
Sbjct: 265 EKMEDKMALRTVQNALITLTDCRVPETDRLQNANSFKDTANVLRMTRAGVAWQAVGCGRG 324

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y  +R   G  +    +++  +  +  D+ A   + +RL+   D         
Sbjct: 325 AYELALKYTMQRKQFGRPIAGFQLVQDLLVTMLGDLTAMQTMVYRLSQLQDAGD------ 378

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A   A + K +C     +++  A E  GG+G + E  IAR   ++ A     G+    
Sbjct: 379 -LADEHASLAKVFCTLRMRSIVDHARELFGGNGILLEYDIARFVADAEAIYSYEGTKEIN 437

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 438 SLIVGRAI 445


>gi|319763957|ref|YP_004127894.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330823779|ref|YP_004387082.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118518|gb|ADV01007.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309151|gb|AEB83566.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 129/358 (36%), Gaps = 27/358 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L +++   GL C      +         +   A      ++ A      +  +    A+ 
Sbjct: 49  LQKKARDIGLWCVRSPEEYGGAGLSLLGQAVVAEEAAKCRMGAYVPACGAFGADPPNAIW 108

Query: 166 -TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISD 223
             TP   + +               P  +    I   ++E  GG D A +I ++  +   
Sbjct: 109 LGTPDQIQRYG-------------VPGIEGGKKIYFAISEASGGADPARSIRARAVRKGG 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   +  +D  I+ A+   +     +   + +G+P G+  + +      RS
Sbjct: 156 KYILNGSKMWITGAKGADWGIVFARTGEQGDRGGITSFIVNGNPEGMSLKPIPV---IRS 212

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            +  E+ F +    +   LG+        E   I   +  A  ++   + +L  AI +A+
Sbjct: 213 YSPYEITFKDVEVPVEDRLGEEGQGFAICEKWLIEGRIPYAAGTIGVAQAALQIAIDWAK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L D+  ++  IAD  +++ AA  L+++ A   D  +   + A+       I 
Sbjct: 273 ERETFRTKLADKQAIQWMIADSEMELRAARLLTWQAAWIADLGRGDLKVAS------SIA 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K    + A  V+  A++ +GG G  +E  + R +RE     I  G      + +   L
Sbjct: 327 KVTATETANRVVDRAIQILGGLGVSQELPLERWFREMRIKRIGEGPSEVHRMVLARQL 384


>gi|300775371|ref|ZP_07085233.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300506111|gb|EFK37247.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 452

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 123/348 (35%), Gaps = 29/348 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+    +     P + +    +  AR+       A      S  +   + +  +    + 
Sbjct: 124 GVTYQGYGCPGMPFLMEGVIAMEMARIDA---SIATFFGVQSGLAMGSIYICGSEEQKQK 180

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS-QGQKISDGIYCLSGHK 232
           W P+             MQK       GLTE   G+  A   +   +K  +G       K
Sbjct: 181 WLPQ-------------MQKFEKIGAFGLTEPEVGSGAAGGLTVTCRKTPEGWVLNGQKK 227

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  ++  +D  I+ A+             + +    G   +++K K+  R      +   
Sbjct: 228 WIGNATFADLVIIWARDLDSGEVKG---FIVEKDNPGYSVEKIKGKMALRIVQNGLITLK 284

Query: 293 NTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
           +        L  +    +  K+  +     A M+    R +   A+ Y R+R   G  + 
Sbjct: 285 DCLITEENRLQNANSFKDTGKVLRMTRAGVAWMATGCARGAYESALDYTRKREQFGRPIA 344

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              +++  + ++  ++ A   + FRL+   DE   + E A+ A       K +C      
Sbjct: 345 SFQMIQGHLVEMLSNLTAMQTMVFRLSEMQDEGILKDEHASLA-------KVFCTLRTRD 397

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +++ A E +GG+G + E  +AR   ++ A     G+     L V   +
Sbjct: 398 IVSRAREVMGGNGILLEYDVARFVADAEAIYSYEGTKEINSLIVGRSI 445


>gi|83816198|ref|YP_445243.1| acyl-CoA dehydrogenase domain-containing protein [Salinibacter
           ruber DSM 13855]
 gi|83757592|gb|ABC45705.1| Acyl-CoA dehydrogenase, C-terminal domain family [Salinibacter
           ruber DSM 13855]
          Length = 398

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 135/430 (31%), Gaps = 54/430 (12%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P  F   + Y     L AL++     V  ++      V++              P +  Y
Sbjct: 9   PTAFDPPDFYD----LEALLSEEARHVRDDV----RTVVTEEVM----------PIIEKY 50

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQL 146
              GE        P    L+      GL  S     +        A+ +    L      
Sbjct: 51  AQRGE-------FP--RHLISTFAEHGLLGSTLPPEYGGEGHSNIAYGLIMQELERGDSG 101

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                          +    +    + W P + + E                  GLTE  
Sbjct: 102 LRSFCSVTGALVMYPIWQYGSDAQRERWLPALANGE-------------AIGCFGLTEPD 148

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G++ A + ++ ++  DG       +W  ++ ++D  ++ A+ E       V   L +  
Sbjct: 149 VGSNPAEMKTRARRDGDGWVIDGHKRWSTNATIADVAVIWAKDEDDT----VRGFLVETD 204

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMS 324
            +G+    + +    R+  T E+   +        L   +G    +  L          +
Sbjct: 205 RDGVETPPIDDSWSLRAAVTSEVVLDDVRVPDAARLPEVSGLKGPLSCLTQARYGICWGT 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +         A  +A+ R   GG +    +M+  + D+  +I  A  L++RL    +   
Sbjct: 265 IGAAMACFDTARQHAQNREQFGGPIGRFQLMQERLVDMVQEITKAQLLNWRLGTLKEAGT 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R ++ + A+          C+ A  V   A + +GG+G      + RH     +     
Sbjct: 325 MRPQQVSLAKR-------NNCQTALDVARSARQVLGGNGVTSMYPVMRHMNNLESVVTYE 377

Query: 445 GSGNAMVLDV 454
           G+     L V
Sbjct: 378 GTHEVHTLIV 387


>gi|113867541|ref|YP_726030.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113526317|emb|CAJ92662.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 620

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/511 (17%), Positives = 173/511 (33%), Gaps = 80/511 (15%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           + V   P     L+     GL  +  D     +      +      +  A +        
Sbjct: 69  ETVSIIPEVSTALKAFCEAGLMAAGQDYELGGMQLPVVVEKAGFAYFKGANVGTSSYPFL 128

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++ +A+++    TP   + +               P         + L+E + G+ ++ I
Sbjct: 129 TIGNANLLLTHGTPAQVETFVK-------------PEMDGRFFGTMCLSEPQAGSSLSDI 175

Query: 215 TSQGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGC 255
           T++ +          Y L G+K ++S+   +       ++LA++ G           +  
Sbjct: 176 TTRAEYEGESPLGAQYRLRGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISL 235

Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGFLL 299
           F+VP+ L +     G  N +    L +K+G R      L F               G+L+
Sbjct: 236 FIVPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYRPGGKAGAIGYLV 295

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------GG------ 347
           G+ +     +  M     +   + +V         A+ YAR R         G       
Sbjct: 296 GEPHKGLACMFHMMNEARIGVGLGAVMLGYTGYLHALDYARNRPQGRAVGPGGKDAASPQ 355

Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA---------RIMA 397
             L++   ++R +      +    AL+   A   DE ++ +     A          I+ 
Sbjct: 356 VKLVEHADIRRMLLAQKSYVEGGLALNLYCARLVDEEEAAAAAGDQAAHARLALLLDILT 415

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456
           PI K W  +        A++  GG GY  E ++ + YR++  N I  G+     LD+L  
Sbjct: 416 PIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGR 475

Query: 457 -LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI------- 508
            ++ K    F+ L   ++  +  +       L                +T+ +       
Sbjct: 476 KVVMKDGAAFKLLGERVQDTITRALAAGNAELSQQAGALGTATKRLAEVTQALWSAGDPN 535

Query: 509 -ALASSAAALYRAGMNDIADVFLENRFLDNC 538
             LA+++  L   G   +A ++LE   L   
Sbjct: 536 VTLANASVYLEAFGHVVVAWIWLEQALLAQA 566


>gi|326317172|ref|YP_004234844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374008|gb|ADX46277.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 631

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/583 (16%), Positives = 191/583 (32%), Gaps = 108/583 (18%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          R + 
Sbjct: 6   TLDFLLHDWLDAVALTQRERFADHSRETFDAVLDTCERIAREKYAPFNRLVDTEEPRMED 65

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V    A H   R     G+  +  D +   +      +  A   +  A +  G  +  
Sbjct: 66  GRVVLPRATHEARRAYAESGMLSAAQDYAIGGMQLPYTLESAANSFFAEASISIGSNL-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++ +  T    + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 125 TVGNANLLMVHGTEAQREVFALNEFNGRWSGT-------------MCLSEPQAGSSLSDI 171

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++     D          Y L+G+K ++SS   +       ++LA++ G          
Sbjct: 172 ATRAVPDGDDFESDPLGPRYRLAGNKMWISSGDHEMTENIVHLVLAKIPGPDGRPVPGVK 231

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS------------- 292
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKHLVDTSGQLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGTYPVRAGQGPG 291

Query: 293 -------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                     G+ +G        +  M     +   + +          ++ YA+ R   
Sbjct: 292 GLDGRGAGAIGYRVGGPGDGLKCMFHMMNEARIGIGMAATMLGLAGYRASLQYAKDRTQ- 350

Query: 346 GGIL----------------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           G  +                      I+   ++R +         A AL+   A   DE 
Sbjct: 351 GRPIVPRSAGGDGKAGKDASAPPVRLIEHADIRRMLLAQKSYGEGALALNLYCARLVDEQ 410

Query: 384 KSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + S EAA        ++ PI K W  +      + A++  GG GY  +  + +++R++ 
Sbjct: 411 HTGSPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQIHGGYGYTRDFPVEQYWRDNR 470

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL---------EQDLGSSGKKVITIL 487
            N I  G+     +D+L   ++ +G    + L   +           +L +   ++   L
Sbjct: 471 LNMIHEGTHGIQAMDLLGRKVVMEGGRGLQLLAGRVNATIQRAMERPELAAHANELARAL 530

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +  +  K             ALA++   +  AG   +A V+L
Sbjct: 531 SEVGAATKAAWATGEPAE---ALANAVPYMQAAGHMVLAWVWL 570


>gi|157107100|ref|XP_001649622.1| acyl-coa dehydrogenase [Aedes aegypti]
 gi|108868733|gb|EAT32958.1| acyl-coa dehydrogenase [Aedes aegypti]
          Length = 421

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 110/313 (35%), Gaps = 36/313 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK             M K  +    GLTE   G+D +++
Sbjct: 129 SSLCMGAIYDYGSEEQKQKYLPK-------------MAKGELIGCFGLTEPNHGSDPSSM 175

Query: 215 TSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++                 W  +SP++D  I+  +  +GRV  F+V R   + S  GL 
Sbjct: 176 ETRAVHDPRTKTYVLTGSKTWITNSPVADVCIVWGKTEDGRVRGFIVDR---EQSSTGLS 232

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             +++ K   R++ T  +            L      V  M+     L++A   ++   +
Sbjct: 233 TPKIQGKFSLRASDTGMILMDEVRIPEDNILP----NVSGMRGPFGCLNNARYGIAWGAL 288

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE     A  Y   R      L    +M++ +AD+  +I+        +    D+   
Sbjct: 289 GAAESCLKVARQYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLTACLHVGRLKDQKLH 348

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E       M  + K      A  +   A + +GG+G  +E  I RH     A +   G
Sbjct: 349 TPE-------MISMLKRNNAGKALEIARVARDMLGGNGIADEYHIIRHVMNLEAVNTYEG 401

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   +
Sbjct: 402 THDIHALILGRAI 414


>gi|115387881|ref|XP_001211446.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195530|gb|EAU37230.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 436

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/333 (20%), Positives = 126/333 (37%), Gaps = 24/333 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +A   TP   + W P++              K  +   LG+TE   G
Sbjct: 120 WGLGGGNSIGCPPIARFGTPEQRRRWLPEV-------------AKGDIRFCLGITEPDAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  ++  D        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 167 SDVANIRTTAKREGDHYVVNGSKKW-ITNGIWADYCTAAVRTGGPGRSGISLLVVPLTAP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  +EF +       L+G+ N     +        L  A  S+
Sbjct: 226 GVTRRRMYNS-GVNASGSTFIEFDDVRVPVDHLIGEENKGFALIMSNFNPERLSLACASL 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A +YA +R   G  LI +  ++  I    L I  A A   +L +  +  K 
Sbjct: 285 RLARVCAEDAFNYAVQRETFGSPLIQRQAIQAKIFKFGLMIEPAYAFMEQLVHIIELTKD 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
           R  +      M  + K    +     + EA + +GG+GY    +   I +  R++  + +
Sbjct: 345 RPVDDVRIGGMTALLKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVV 404

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
             GS   M   +   L++ T         LE+ 
Sbjct: 405 GGGSEEIM---MGLALQEETKALRSRRKALERS 434


>gi|89893686|ref|YP_517173.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
 gi|89333134|dbj|BAE82729.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 381

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 137/373 (36%), Gaps = 31/373 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+    P    L    + +G         +         +I        A   A    
Sbjct: 31  ECDENHVFPD--KLADALMDNGFGLLGVPEEYGGTPCDVLTQIMVIEELARAGGPAYMFT 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +  +    +          +       + EY            +A  LG++E + G+D +
Sbjct: 89  NAMLIDDML--TFGNDEQKR------ITMEYAGR-------GRMAFSLGISEPQAGSDDS 133

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGL 270
           AI S   +  +G   L+GHK ++S+     + +    + +       +     D +  G+
Sbjct: 134 AIASTATRR-NGKVYLNGHKTWISNAGEYPYCLFLTRDSQAPNPHKAISMWWVDMTKPGI 192

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSG 327
             Q +  K+G + +   EL F +        + V   G ++ MK      L     S+  
Sbjct: 193 KLQAV-GKVGFKMSKFYELYFEDVEVEEKDLVGVEGEGFLQLMKNFEIERLAGVAASLGW 251

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +  +A+ YA +R   G  + +  ++++ I ++ + +    ++ ++     +   S  
Sbjct: 252 AQGAFDDAVRYANQRVQFGKPIGNFQLIQKKITEMQIKLETMRSMLYKACWEKENGLS-- 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 +I + + KY+  + A  VI +AM+  GG GY  E  I R +R+  AN I  G+ 
Sbjct: 310 -----VQISSALCKYYVARAAQEVIDDAMQIFGGIGYTTETRIQRFWRDCRANRIGGGTD 364

Query: 448 NAMVLDVLNLLEK 460
             MV      + K
Sbjct: 365 EIMVHIAGRAILK 377


>gi|209520070|ref|ZP_03268846.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209499501|gb|EDZ99580.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 403

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 25/320 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++ S              +      L+E + 
Sbjct: 100 ADFALAMQGLGSGAISLAGTHEQKSRYLPRVASG-------------TAIAAFALSEPQA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 147 GSDVAAMALAAREEGDHYALDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVDAQT 206

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+N        L V   G    M+ L       A  S
Sbjct: 207 PGLEIAERIDVIAPH--PLARLRFANARVPKSQMLGVPGEGFKIAMRTLDIFRTSVAAAS 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE +  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 265 LGFARHAMAEGLARAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 325 SVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGTAVEMLYREIRALRIYE 377

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+     L V   L K    
Sbjct: 378 GATEVQQLIVGRDLLKAHAA 397


>gi|149619055|ref|XP_001518169.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 246

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 100/250 (40%), Gaps = 13/250 (5%)

Query: 217 QGQKISDGIYCLS--GHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
                 D +      G + F+S    SD ++++ +  G  G   +  L+ +    GL + 
Sbjct: 3   TTHPTGDVVKTRGEVGLQAFISGGGESDTYVVMCRT-GGPGPKGISCLVVEKGTPGLSFG 61

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMSVSGMRV 330
           + + K+G  S  T  + F +    +   +     G +  MK      ++ A  S+     
Sbjct: 62  KKEKKVGWNSQPTRAVIFEDCTIPVANRIGAEGQGFLIAMKGLNGGRINVASCSLGAAHA 121

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++    ++   R   G  L     ++  +AD+A  + A+  +    A +  E +      
Sbjct: 122 AVVLTRNHLNVRKQFGEPLASNQYLQFKLADMATRLVASRLMIRNAAVALQEGRED---- 177

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A  +  + K +      A+  +A++  GG GY+++ ++ ++ R+   + IL GS   M
Sbjct: 178 --AVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDCRVHQILEGSNEVM 235

Query: 451 VLDVLNLLEK 460
            + V   L +
Sbjct: 236 RMLVSRSLLQ 245


>gi|328786944|ref|XP_393736.3| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Apis
           mellifera]
          Length = 431

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 131/365 (35%), Gaps = 34/365 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              ++R     G+ C          V   A+ + A  +  +       L   +   A  +
Sbjct: 82  HKEIMREMGELGILCCTIKGYGAAGVSSVAYGLLAREIEYVDSGYRSALSVQTSLVAGAI 141

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + + PK+ S +Y                 GLTE   G+D ++I ++    S
Sbjct: 142 DAHGSDAQKEKFLPKLISGQY-------------IGCFGLTEPDHGSDPSSIETKAVYDS 188

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
               Y LSG K W  ++P++D  I+ A+   +  +  F+V R   +G+   L    +K K
Sbjct: 189 KKKVYKLSGIKIWITNAPIADIMIIWAKSVEDDEMRGFIVERKENEGNR--LITPAIKGK 246

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-- 336
              R + T  +   +        L    G        + L++A   ++   +  AEA   
Sbjct: 247 FSLRCSITGMILMDDLEVPEENMLPNVKGLK---GPFVCLNNARYGIAWGALGAAEACLH 303

Query: 337 ---HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y+  R      L    ++++ + ++  DI+       R+    DE K+  E     
Sbjct: 304 ISRAYSLHRKQFKRPLAANQLIQKKLVEMMCDISFGLQACLRVGRLKDENKATPE----- 358

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K      A  +   A + +GG+G  +E  + RH     +     G+ N   L 
Sbjct: 359 --MISMIKKNSAMKALNIARNARDMLGGNGISDEYHVIRHMMNLESVVTYEGTDNIHTLI 416

Query: 454 VLNLL 458
           +   +
Sbjct: 417 LGRAI 421


>gi|75764463|ref|ZP_00743954.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488051|gb|EAO51776.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 195

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 10/196 (5%)

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  GL      +K+G R++ T E+           +LGD+N              +  A 
Sbjct: 4   TSEGLTISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVNKGFKQFLYTLDGGRISIAA 63

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++V   + +   A+ YA+ R   G  + +   ++  +AD+A ++  A  L  + A   D 
Sbjct: 64  LAVGIAQSAFERALQYAKERQQFGKSISNFQAIQFKLADMATEVELARNLVHKAAWLKDN 123

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K   +EAA A       K +  + A  +  +A++  GG GY+ E  + RH R++    I
Sbjct: 124 DKPFGKEAAMA-------KLFASEAASRIANQAVQIHGGYGYMREYEVERHIRDAKLLEI 176

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   L
Sbjct: 177 GEGTSEIQRLVIARHL 192


>gi|297195238|ref|ZP_06912636.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719681|gb|EDY63589.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 396

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/414 (16%), Positives = 132/414 (31%), Gaps = 39/414 (9%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            +L    +  +  T +  A   +   P +  +   GE        P    L R     G 
Sbjct: 19  DDLLHDEDLAIRDTVRAWA--TDRVLPHIADWYERGEL-------PGIRDLARELGSIGA 69

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                +           + +    L          +      +   +    +    + W 
Sbjct: 70  LGMSLEGYGCAGATAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKQRWL 129

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P + + E             +    GLTE   G+D AA+ +  ++            W  
Sbjct: 130 PGMAAGE-------------IIGCFGLTEPDHGSDPAAMRTHAKRDGSDWVLTGRKMWIT 176

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ AQ +  +  F+VP         G     +K+K   R++ T EL      
Sbjct: 177 NGSVAGVAVVWAQTDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVMDEVR 231

Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                +L D+    GP+  +           S+   R S   A+ YAR R   G  +   
Sbjct: 232 LPADAVLPDVTGLRGPLSCLS-HARYGIVWGSMGAARSSFEAAVSYARTREQFGRPIGGF 290

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + +  +AD+A+++     L+  L    D  K R E+ ++        K    + A  + 
Sbjct: 291 QLTQAKLADMAVELHKGILLAHHLGVRMDAGKLRPEQVSFG-------KLNNVREAIEIC 343

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             +   +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 344 RTSRTILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 396


>gi|194289580|ref|YP_002005487.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193223415|emb|CAQ69420.1| putative ACYL-COA DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424]
          Length = 620

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/507 (17%), Positives = 173/507 (34%), Gaps = 82/507 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L+     GL  +  D     +      +      +  A +        ++
Sbjct: 71  VSIIPEVSTALKAFCDAGLMAAGQDYELGGMQLPVVVEKAGFAYFKGANVGTSSYPFLTI 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP   + +               P  +      + L+E + G+ ++ IT+
Sbjct: 131 GNANLLLTHGTPAQVETFVK-------------PEMEGRFFGTMCLSEPQAGSSLSDITT 177

Query: 217 QGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +          Y L G+K ++S+   +       ++LA++ G           +  F+
Sbjct: 178 RAEYEGESPLGAQYRLRGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFI 237

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS-----------NTFGFLLGD 301
           VP+ L +     G  N +    L +K+G R      L F               G+L+G+
Sbjct: 238 VPKYLVNEDGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPGGKAGAIGYLVGE 297

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------- 348
            +     +  M     +   + +V         A+ YAR R   G               
Sbjct: 298 PHKGLACMFHMMNEARIGVGLGAVMLGYTGYLHALDYARNRPQ-GRPVGPGGKDAASPQV 356

Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA---------RIMAP 398
            L++   ++R +      +    AL+   A   DE ++ +     A          I+ P
Sbjct: 357 KLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEEEAAAAAGDEAAHARLALLLDILTP 416

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456
           I K W  +        A++  GG GY  E ++ + YR++  N I  G+     LD+L   
Sbjct: 417 IAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRK 476

Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI-------- 508
           ++ K    F  L   ++  +G +       L                +T+ +        
Sbjct: 477 VVMKDGAAFRLLGERVQATIGRALAADDAELAQQARALGAASQRLAEVTQTLWSAGDANV 536

Query: 509 ALASSAAALYRAGMNDIADVFLENRFL 535
            LA+++  L   G   +A ++LE   L
Sbjct: 537 TLANASVYLEAFGHVVVAWIWLEQALL 563


>gi|134100012|ref|YP_001105673.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291002996|ref|ZP_06560969.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912635|emb|CAM02748.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 380

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 124/359 (34%), Gaps = 27/359 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           HP    L  R    G       + +    R        A L L  +  A      S  + 
Sbjct: 39  HPHSRELYARMAELGWLGVSIPQDYGGAGRG------MAELCLFLEETAYGRAPISGFAT 92

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           ++++     +         F  E                 + ++E   G+D+ A+  + +
Sbjct: 93  TIISAAAYEK---------FGSEPQKREVLSGVVRGRVEAISMSEPGAGSDVGALRCRAE 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNK 278
           +   G        W  ++ ++D  +++A+  G       + + +      GL    + + 
Sbjct: 144 RRPGGWVVNGQKTWCSNAHIADHVLLVARTSGEGTKHEGLTQFMVPTGAEGLRISGI-DT 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R     +L F++ F     ++G +      +     L  +  A + +   R +  + 
Sbjct: 203 MGGREVN--DLYFTDCFLPDDAVVGTVGAGWSQLVSGLNLERMILAALMLGTARRAFDDT 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y  +R   G  +     ++  IAD+A ++  A  L   +A + D              
Sbjct: 261 VSYITQREQFGRPVGTFQALRHRIADMATELECARLLVDDVARTIDANP-----GVLFPR 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            A + K  C ++A  V  E M+ +GG GY  +  +    R +  +++  G+       +
Sbjct: 316 EASMAKLKCTELAKHVALEGMQMMGGYGYATDYGMESLLRSTVVSTVYGGTSEIQRDII 374


>gi|291303360|ref|YP_003514638.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572580|gb|ADD45545.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 616

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 90/526 (17%), Positives = 195/526 (37%), Gaps = 82/526 (15%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +E+  + E  L+   ++    ++ N P    + P     + V     +    R  
Sbjct: 38  ARDILREVSRIAEKDLAEPFED----SDRNPPV---FDPA---TNSVTLPEGFKKAYRTM 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +           +       +      A + L +        +     A  +    T   
Sbjct: 88  MESEYWRLDVPPALGGTNAPRTLWWAFADMVLGSNPALWMYAAGPSF-AHTLEREGTEEQ 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            K WA     +++  T             + LTE   G+D+ A  ++  +  DG + + G
Sbjct: 147 KK-WAKLFADKQWGAT-------------MVLTEPDAGSDVGAGRAKAYQQPDGSWHIEG 192

Query: 231 HKWFLSSPMSD-----AFIMLAQV----------EGRVGCFLVPRLLED------GSPNG 269
            K F++S   D        +LA+              +  F+VP+   D      G  NG
Sbjct: 193 VKRFITSGEHDLTDNIIHYVLARPVGVDGVGGPGTKGLSLFVVPKFHFDAETGELGDRNG 252

Query: 270 LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +    +++K+G + + T EL F       G+L+G+ +     +  +     +     +++
Sbjct: 253 VYATNVEHKMGLKVSTTCELTFGEKHPAKGWLMGEKHEGIRQMFLIIEYARMMVGSKAIA 312

Query: 327 GMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSF 374
            +      A+ YA+ R                  + + P ++R++           AL  
Sbjct: 313 TLSTGYLNALEYAKSRVQGADLLRSTDKSAPRVTITNHPDVRRSLLMQKSYAEGLRALVC 372

Query: 375 RLANSFD---------EAKSRSEEAAYARIMAPITKYWCCKMAPAV-IAEAMECIGGSGY 424
             A+  D         +A++    A  + ++ PI K    + A  +  +E+++  GGSG+
Sbjct: 373 YTASWQDKQRIAEDAGDAETEKLAARVSDLLLPIIKGCGSERAYELLSSESLQTFGGSGF 432

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKK 482
           +++  I ++ R+S  +++  G+     LD L   +++ G      + + + Q LG+ G +
Sbjct: 433 LQDYPIEQYVRDSKIDTLYEGTTAIQSLDFLFRKIVKDGGVALGTVATEIGQWLGADGPE 492

Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAA------LYRAGM 522
            +  +R S+    E+   A+ +   +  A  A+       LY+AG+
Sbjct: 493 SLKGIRASLGEALEN---AQAMLGSLGTALGASQQGQPRELYKAGL 535


>gi|319762275|ref|YP_004126212.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317116836|gb|ADU99324.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 633

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/599 (16%), Positives = 194/599 (32%), Gaps = 102/599 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +                           R+A     P          R+D 
Sbjct: 20  TLDFLLYDWLRAASLTARPRFADHSRETFDAVLDTCERIAREKYAPFNRTVDTQEPRFDG 79

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      H   +     G+  +  D     +      +  A   +  A +  G  +  
Sbjct: 80  EKVILPQCTHDARQAYADSGMLGAAQDYELGGMQLPYVVESAANSFFACASISIGSNL-L 138

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ + +  TP   + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 139 TTGNANAILVHGTPMQQRVFAANEFNGRWAGT-------------MCLSEPQAGSSLSDI 185

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++ +    G         Y L G+K ++S+   +       ++LA++ G          
Sbjct: 186 ATRAEPDGAGFEADPLGPRYRLRGNKMWISAGDHELTENIVHLVLAKIPGPDGKPVPGVK 245

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN------------ 293
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 246 GISLFIVPKKLVDTEGKLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGRYPVRAGQGGG 305

Query: 294 -------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                    G+L+G        +  M     +   + +          ++ YAR R   G
Sbjct: 306 LDGRGAGAIGYLVGKPGEGLKCIFHMMNEARISIGMAATMLGLAGYYASLDYARTRLQ-G 364

Query: 347 GIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
             +              I+   +KR +         A AL+   A   DE ++    AA 
Sbjct: 365 RPIGSGGKDASSPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLVDEGRTGDAGAAA 424

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+ 
Sbjct: 425 DARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTH 484

Query: 448 NAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK---------VITILRDSISLCKE 496
                 L    ++ +G    + L  T+   +  + ++         +   LRD I   + 
Sbjct: 485 GIQAADLLGRKVVMQGGAGLQLLARTVAATIAKARQRPGLAAWAGQLEQALRDVIDATRA 544

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFL---ENRFLDNCHSTHCMLHGRFNAA 552
                       ALA++   +   G   +A ++L   ++    +   +     GR  AA
Sbjct: 545 AWATGNA---GEALANAVPYMQAFGHVVLAWMWLDVADSVLAKDASLSIAASAGRMGAA 600


>gi|296136055|ref|YP_003643297.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
 gi|295796177|gb|ADG30967.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12]
          Length = 609

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/509 (18%), Positives = 177/509 (34%), Gaps = 95/509 (18%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+V    A HA  R     G+  +  D S   +      +  A   +  A +  G  M  
Sbjct: 64  DRVILPQATHAAWRAYADSGMLAAAQDESIGGMQLPYTVEAAANAFFAKASVGIGAGM-L 122

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++    TPR  + +A   F+  +  T             + L+E++ G+ ++ I
Sbjct: 123 TVGNANLLMAHGTPRQQQIFARAEFAGRWAGT-------------MCLSEQQAGSSLSDI 169

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++                Y L G K ++S+   +       ++LA++ G          
Sbjct: 170 ATRAMPDGSDFEADPLGPRYRLFGSKMWISAGEHELTDNIVHLVLAKIPGADGKLVPGAR 229

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----------TF 295
            +  F+VP++L D      G  N +    L +K G R      L F +            
Sbjct: 230 GISLFIVPKMLVDASGQLTGHRNDITLAGLNHKCGWRGTPNTLLSFGDGRYPAGGAPGAI 289

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+ +G        +  M     +   + +          A+ YAR+R   G         
Sbjct: 290 GWRVGAAGEGLRCMFHMMNEARIGVGLSAAMLGMAGYEAALAYARQRPQ-GRPVGPSGKD 348

Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEEAAYARIM 396
                  +I+   +KR +         A AL    A   DE     A + SE A    ++
Sbjct: 349 PSQPQVSIIEHADVKRMLLAQKTYAEGALALDLYCARLVDEQRTGGATAASEAALLLEVL 408

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  +  + +++R++  N I  G+     LD+L 
Sbjct: 409 TPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLG 468

Query: 457 L--------------LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
                             G    +   S   Q  G++    +  L   ++     +G   
Sbjct: 469 RKVVMDGGAGLALLAARVGATATQAENSPPLQPHGAALHAALDDL--LVATRAAWEGN-- 524

Query: 503 FLTEKIALASSAA-ALYRAGMNDIADVFL 530
              +  A  ++A   L   G   +A ++L
Sbjct: 525 ---DPAATLANATPYLQAFGHVVLAWIWL 550


>gi|148557129|ref|YP_001264711.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148502319|gb|ABQ70573.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 394

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 131/399 (32%), Gaps = 44/399 (11%)

Query: 71  QELARMANYNTP--QLHAY--GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           + + R A +     +L         E  D  E  PA           GL  +     +  
Sbjct: 23  ERMIRDAAHGFAQSELQTRVIAAYREEVDAPELFPAM-------GAAGLLGATLPEEYGG 75

Query: 127 VVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 A+ + A  +  +           S      +    +    + + P +       
Sbjct: 76  ANASYVAYGLIAREIERVDSGYRSMASVQSSLVMHPIYAYGSEEQKRHYLPGL------- 128

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                     +    GLTE   G+D   + +  ++  DG        W  ++P +D F++
Sbjct: 129 ------AAGRLIGCFGLTEPDAGSDPGGMRTVARRDGDGYVLHGSKTWISNAPFADVFVV 182

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305
            A+ E   G   +   + +    GL   +++ K+  R++ T  +             +  
Sbjct: 183 WAKSEAHGGQ--IRGFILEKGMKGLSAPKIEGKLSLRASTTGMILLDEVKV----GADAL 236

Query: 306 TGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359
              VE +K     L+ A   +S   +  AE   +A R     R   G  L    + ++ +
Sbjct: 237 LPNVEGLKGPFGCLNRARYGISWGALGAAEFCFHAARQYGLDRKQFGRPLAATQLYQKKL 296

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++  DI      S R+    DE +       +A  M  + K      A  +  +A +  
Sbjct: 297 AEMMCDIGFGLQASLRVGRLMDEGR-------FAPEMVSMVKRNNVGKALDIARQARDMH 349

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG+G  EE  + RH       +   G+ +   L +   +
Sbjct: 350 GGNGISEEYQVIRHMMNLETVNTYEGAHDVHALILGRAI 388


>gi|169235342|ref|YP_001688542.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
 gi|167726408|emb|CAP13191.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1]
          Length = 386

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 133/404 (32%), Gaps = 28/404 (6%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           ++ELL + V+   A+ + + A     +     P  E +     +P    +L  ++  GL 
Sbjct: 2   DVELLSDDVVPEHARAVKQDARAFAAE--HIAPHAEEYYASGEYP--WEVLEAAMDAGLV 57

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                  +          +  A  +  A       +  +   A +V    TP        
Sbjct: 58  AQDIGEDYGGRGLDLTQMLAIAEEFFRADAGIALTLQLASFGAELVEEYGTPAQKDRLL- 116

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                        P+       GL ++E   G+++A + +  ++  D         W  +
Sbjct: 117 ------------TPVANNDQLTGLAVSEPEVGSNLAGMQTTAERDGDEYVLNGEKYWIGN 164

Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              +D   + A+  +                 +G   + +  K+G R++    +   +  
Sbjct: 165 GVEADWVTVYAKTGDTDDRYMNYSLFAVPTDTDGYEAEHIPEKMGMRASKQAHIVLDDCR 224

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                L+G        + D      +  A   +     +  EA  +   R   G  + D 
Sbjct: 225 VPEANLIGTEGGGFMMLTDFFNHGRVVVAGHGLGLAAAAFEEAWDFVHDRAGFGRTVSDF 284

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++ ++AD+ ++  +A AL++R A            AA A+  A        ++A A  
Sbjct: 285 QSVQHSLADMRIEFESARALAYRAAEKVAAHDEPGLWAAMAKTKA-------TEVATANA 337

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + M+  GG     +R IAR YR+     I  G+       V  
Sbjct: 338 EQGMQFHGGRSNFTDRRIARVYRDVRIPVIYEGANEIQRNLVYR 381


>gi|126436651|ref|YP_001072342.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126236451|gb|ABN99851.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 388

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 122/361 (33%), Gaps = 29/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
            L  ++   GL        +         ++  A      ++ A      +   +   + 
Sbjct: 52  ELQAKARELGLWSLQTPTEYGGAGLSVLGQVVVAEEAAKCRMGAFFPALGAFGGNPPNIM 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKIS 222
              +    + +A  I                       +TE  GG+D A AI  +  +  
Sbjct: 112 FKASREQFEKYARPIIDGTMSKAYT------------AITEASGGSDPARAIRLKATRHG 159

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG        W   +P +D  ++ A+     G   +   + +    G+ + R+       
Sbjct: 160 DGYVLNGSKMWISHAPGADWGVVYART--GEGRDGISAFIVEKDTPGVTFSRIPV---MA 214

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S A  EL F N       L+G          D  I   +  A   +   + +L  A  +A
Sbjct: 215 SFAPYELNFDNVAIPAAQLIGVEGQGFSMASDFLIHGRIIYAAGPIGIAQSALDLACRWA 274

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R V GG L D+  ++  + D  +++ AA  L ++ A + D   +   +       A +
Sbjct: 275 KDRDVFGGKLADKQGIQWMLVDSEVELRAARLLMYQAAWNADLGHNVRVD-------ASV 327

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  ++A  V+   ++  G  G   E  + R +R+     +  G+       +   L 
Sbjct: 328 AKMYGTEVAYRVLDRCIQIHGALGISTELPLERWFRDLRVKRLGEGATEVQREVISRSLL 387

Query: 460 K 460
           +
Sbjct: 388 R 388


>gi|329939193|ref|ZP_08288567.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
 gi|329302078|gb|EGG45971.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045]
          Length = 396

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 115/368 (31%), Gaps = 28/368 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R     G                  + +    L          +      +  
Sbjct: 55  PGIRELARELGDLGALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMY 114

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + W P++ + E             V    GLTE   G+D A + +  ++
Sbjct: 115 AIHRFGSEEQKRHWLPRMAAGE-------------VIGCFGLTEPDHGSDPAGMRTHARR 161

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++   ++ A+ E  +  FLVP         G     +++K  
Sbjct: 162 DGGDWVLDGRKMWITNGSVAGVAVVWARTEDGIRGFLVPA-----GTPGFSAPEIRHKWS 216

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R++ T EL   +        L   TG    +  L          ++   R     A+ Y
Sbjct: 217 LRASVTSELVLDDVRLPAEAVLPEVTGLRGPLSCLSHARYGIVWGAMGAARSCFESAVEY 276

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +    + +  +AD+A+++     L+  L    D  + R E+ ++      
Sbjct: 277 ARTREQFGRPIGGFQLTQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG----- 331

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +G +G   E  + RH     +     G+   M   VL   
Sbjct: 332 --KLNNVREAIEICRTARTILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKA 388

Query: 459 EKGTNLFE 466
             G + F 
Sbjct: 389 LTGLDAFR 396


>gi|254427082|ref|ZP_05040789.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193251|gb|EDX88210.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 423

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 113/327 (34%), Gaps = 31/327 (9%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            AQ     +          +    T    + WA              P+          +
Sbjct: 113 HAQGLVTAMGVSMGLGGGAIMSKGTTEQKERWA-------------LPLLTLEKVGAWAI 159

Query: 203 TEKRGGTDI-AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256
           +E   G+D    + +  ++  +G Y ++G K W  + P +D  I++ +++          
Sbjct: 160 SEPNAGSDAFGQMKTLAKRDGNGGYIINGSKTWITNGPYADTIILICKLDEEGVPADQRK 219

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-----STGPVED 311
           +V  +L D    GL   +   K+G  S+ T EL  S+        L            + 
Sbjct: 220 IVSFIL-DSGMEGLEQSKPFKKMGIGSSPTGELFLSDVKAGPERLLGGSEDSYGRSGAKG 278

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             +      A M++  +  +L  +  YA  R   G  +    +++  +A + +       
Sbjct: 279 TFMQERAGVAAMALGMVERALQLSTQYASDRVQFGRAIGQNQLIQLKLAKMEVARTNLQN 338

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + FR      E       A      A   K +  ++A  V  EA++  GG GY+ E  + 
Sbjct: 339 MVFRYIEMTAEG------AQMTLAEASAMKLYAAQVAMEVATEAVQIHGGYGYMRESRVE 392

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           +  R++    I  G+    ++ +   L
Sbjct: 393 QLMRDAKILQIYAGTDEMQIIAIARDL 419


>gi|254488179|ref|ZP_05101384.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
 gi|214045048|gb|EEB85686.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp.
           GAI101]
          Length = 384

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 129/399 (32%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGE----RWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   +  +     + +                  D  +   A  +L+      G      
Sbjct: 3   MSDRSFLDWPFFEDRHRALADDLDAWAAGALANVDHGDTDAACRSLVAMLGDGGWLRYSG 62

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
            +  + +  +    IR           A    +        ++L  TP   + W PK  S
Sbjct: 63  AQGDDTLDVRSLCLIR--ETLARHDGLADFSFAMQGLGTGAISLFGTPEQQEAWLPKTRS 120

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                         +      LTE + G+D+A  T   ++  D         W  +  ++
Sbjct: 121 G-------------AAISAFALTEPQSGSDVANSTMTAERDGDDYVLNGEKTWISNGGIA 167

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      G         I     AT  L F++       
Sbjct: 168 DVYTLFARTGEAPGARGLSAFILPAGLPGFEIADRLQVIAPHPLAT--LRFTDCRVPASA 225

Query: 301 DLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M +L       A  ++   R +L EA+     R V G  L D  +++ 
Sbjct: 226 MLGAQGQGFAIAMSVLDVFRSTVAAAALGFARRALDEALKRVSTREVQGKPLADLQMVQG 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A+D+ A+  L +R A   D+   R          A + K +    A  VI +A++
Sbjct: 286 HIADMAVDVDASALLIYRAAWLKDQGAPR------VTREAAMAKLFATDHAQIVIDKAVQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G     ++   YRE  A  I  G+ +   + +  
Sbjct: 340 LFGGDGVRNGMAVESLYREIRALRIYEGASDVQRVVIAR 378


>gi|121594058|ref|YP_985954.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120606138|gb|ABM41878.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 642

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/568 (16%), Positives = 186/568 (32%), Gaps = 89/568 (15%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          ++D 
Sbjct: 31  TLDFLLYDWLQAESLNARERFADHSRETFDAVLDTCERIAREKYAPFNRTVDTQEPQFDG 90

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V      H   +     G+  +  D +   +         AA  +      +      
Sbjct: 91  ERVILPQCTHDARQAFADSGMLSAAQDYALGGMQLPYV-VESAANSFFGCASISIGSNLL 149

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ + +  TP   + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 150 TTGNANAILVHGTPLQQQVFAANEFNGRWAGT-------------MCLSEPQAGSSLSDI 196

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
           T++ +              Y L G+K ++SS   +       ++LA++ G          
Sbjct: 197 TTRAEADGADFEVDPLGPRYRLRGNKMWISSGDHELTENIVHLVLAKIPGPDGKLVPGVK 256

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 257 GISLFIVPKKLVDTDGQLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGRYPVRGGAGAI 316

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------- 345
           G+L+G        +  M     +   + + +        ++ YAR R             
Sbjct: 317 GYLVGRPGEGLRCMFHMMNEARIAIGMAATTLGLAGYYASLDYARTRLQGRPVQGSTSAA 376

Query: 346 ---GG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---- 391
              G         LI    +KR +         A AL+   A   DE ++   +AA    
Sbjct: 377 GSAGKDASQPPVPLIRHADIKRMLLAQKSYCEGALALNLYCARLVDEGRTGEPQAAQDAK 436

Query: 392 -YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+    
Sbjct: 437 LLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQ 496

Query: 451 V--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK-VITILRDSISLCKEDKGLARFLT-- 505
              L    ++  G    + L  T+   +  + K   +    D ++   +D G A      
Sbjct: 497 AADLLGRKVVMLGGAGLQLLARTIGATIAQARKHPELAAWADQLAQALQDVGEATQAAWA 556

Query: 506 ---EKIALASSAAALYRAGMNDIADVFL 530
                 ALA++   +   G   +A V+L
Sbjct: 557 TGNPTEALANAVPYMQAFGHMVLAWVWL 584


>gi|318059918|ref|ZP_07978641.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318077525|ref|ZP_07984857.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 395

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 116/369 (31%), Gaps = 33/369 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           PA   L       GL     +           + +    L          +      +  
Sbjct: 54  PAVRELAEELGSLGLLGMHLEGYGCAGTSAVEYGLACLELEATDSGLRSLVSVQGSLAMY 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    ++W P++ + E                  GLTE   G+D   + ++ ++
Sbjct: 114 AIHRFGSEEQKREWLPRMATGE-------------AIGCFGLTEPDHGSDPGGMRTRARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++   ++ A+ E  V  F+VP         G     + +K  
Sbjct: 161 AGDDWVLDGRKMWITNGSVASVAVVWARAEEGVRGFVVPT-----DTPGFSAPPITHKGS 215

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++ T EL            L   TG       L  L+ A   +    +  A      A
Sbjct: 216 LRASVTSELLLDGVRLPADAVLPEVTGLR---GPLSCLNEARYGILWGALGAARSCFRTA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G  L    + +  +AD+A+++   T L+  L    D    R E+      
Sbjct: 273 LSYAKERDQFGKPLAGFQLTQAKLADMAVELTNGTLLALHLGRRKDTVGLRPEQ------ 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K      A A+   +   +G +G   E  + RH     +     G+     L + 
Sbjct: 327 -VSLGKLNNVNKALAIARTSRTILGANGISLEFPVMRHMANLESVLTYEGTAEMHTLMIG 385

Query: 456 NLLEKGTNL 464
             L   + L
Sbjct: 386 QALTGESAL 394


>gi|119503779|ref|ZP_01625861.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma
           proteobacterium HTCC2080]
 gi|119460287|gb|EAW41380.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma
           proteobacterium HTCC2080]
          Length = 382

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 27/271 (9%)

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRV 253
             +G++E   G+ + A+  +  +  D         W  +   SD   +LA+      G +
Sbjct: 122 GCVGMSEPDAGSQVTAVRCRAVEDGDDYVINGEKLWISNGGYSDFIFLLARFNNDPVGGL 181

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           G  LV R       +G     ++ K+G  S +T ++ F +         N+   P E MK
Sbjct: 182 GLILVER------QDGYETCDIE-KMGLNSQSTAQVSFQDVRVPKT---NLMVPPGEAMK 231

Query: 314 IL-IYLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            L I L  +      M++   + SL E++ YA+ R   G  +    ++   I ++A  + 
Sbjct: 232 TLLISLSGSRPLVSLMALGVAQASLDESVSYAQDRTQFGKPIAGHQLISAKIGEMATKVE 291

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   L+ +  +  D  +     AA        +K++  +MA  V++EA++  GG+G  +E
Sbjct: 292 AGKLLALKALSQIDRGERSDLCAAM-------SKWFGTQMACEVVSEALQIHGGNGITKE 344

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   YR      +  G+     L +   L
Sbjct: 345 YPVEYMYRAVRPFMVTEGTNEIQKLSIGRAL 375


>gi|187479491|ref|YP_787516.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115424078|emb|CAJ50631.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 385

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/317 (21%), Positives = 120/317 (37%), Gaps = 26/317 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++LM +  +   + P++ S                     L+E   
Sbjct: 90  ADFALAMQGLGSGAISLMGSDALRAHYLPRVASG-------------KAIAAFALSEIDA 136

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    +   D         W  +  ++D + + A+     G   +   + D   
Sbjct: 137 GSDVAAMCCAARLDGDSYVLDGEKTWISNGGIADFYCVFARTGEAPGARGISAFVVDADT 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I     AT  L+F N        L     G    M  L       A  +
Sbjct: 197 PGLTISGRIDLIAPHPLAT--LQFDNCRIPATQRLGEPGQGFKLAMMTLDIFRASVAAAA 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EA 383
           +   R +L E +  AR R + G  L D  + + A+ D+A  I ++  L++R A   D + 
Sbjct: 255 LGFARRALDEGLGRARSRRMFGQTLADLQLTQAALGDMACAIDSSALLTYRAAWLRDVKG 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EAA A++ A        + A  VI  A++  GG+G +  + I + YRE  A  I 
Sbjct: 315 ARTTREAAMAKMAA-------TESAQQVIDRALQMFGGAGVMSGQPIEKLYREIRALRIY 367

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L K
Sbjct: 368 EGATEVQKLIIARELLK 384


>gi|126343455|ref|XP_001381234.1| PREDICTED: hypothetical protein, partial [Monodelphis domestica]
          Length = 633

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 150/387 (38%), Gaps = 31/387 (8%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +    GL   +W   + P+              +  +L           + ++ A     
Sbjct: 225 KGRSFGLQA-VWFFRYRPLPYGSPSLAGELPSSMFTRLVEIFGWHDLAVAVTLGAHQAN- 282

Query: 169 RVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IY 226
                    +F  +Y      P +          LTE  GG++  +I +  +    G  Y
Sbjct: 283 ---GFRGILLFGNKYQKERYIPDLASGKSLAAFCLTESTGGSNTDSIMTTAEVSECGKFY 339

Query: 227 CLSGHKWFLSSP-MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            L+G K ++S+  +++ F + A+        G V    +   + +    G+     + K+
Sbjct: 340 TLNGRKIWISNGGIAEIFTVFAKTQVKDMTTGEVHGK-ISAFIVEKDFGGVTSGPPQKKM 398

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LA 333
           G +++ T E+ F+N         N+     +  KI +  L+S   +V    V      + 
Sbjct: 399 GIKASNTTEVHFNNVRVPA---ENLLGDFGDGYKIAMNILNSGRFAVVCALVGTIRKLII 455

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A ++A  R  SG  + +  ++++ +A + +      ++++ ++ + D      +  +  
Sbjct: 456 KATNFAATREQSGTCISNHGIIQKKLARMVMYHYVTESMAYMISGNLD------KHVSDL 509

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            +   I K +  + A  VI E ++ +GG GY++   + +  R+     IL G+ + + + 
Sbjct: 510 HLEVAICKIFASEAAWEVIDECIQVLGGIGYMKAGGVEQIMRDLRIFRILQGTNDVLRVF 569

Query: 454 V-LNLLEKGTNLFEQLFSTLEQDLGSS 479
           V L  L+      + L   LE  + ++
Sbjct: 570 VALGGLQHAGAQLKDLQFILENPMDNT 596


>gi|324999635|ref|ZP_08120747.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 612

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/505 (17%), Positives = 179/505 (35%), Gaps = 67/505 (13%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    E     + N P    Y P   +   V          +                  
Sbjct: 50  TGPLAEHYATIDRNPPV---YDP---KTFSVTTPQELKDAYKVLWDGEWWRLGVPNELGG 103

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
           +    + +  AA + L A       M+     A ++         + WA  +  R +  T
Sbjct: 104 MGIPPSVQWAAAEMMLGANPAVFMYMAGP-NFAGILHKNGNDEQ-RRWAEIMVERGWGAT 161

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD----- 241
                        + LTE   G+D+ A  ++  +  DG + + G K F++S   D     
Sbjct: 162 -------------MVLTEPDAGSDVGAGRTKAVQQDDGTWHIEGVKRFITSAEQDFTENI 208

Query: 242 AFIMLAQVEGRV------GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVEL 289
             ++LA+ EG          FLVP+   D      G  NG     +++K+G +++ T EL
Sbjct: 209 MHLVLARPEGAKQGTKGLSLFLVPKFHFDTQTGESGERNGAFVTNVEHKMGLKASTTCEL 268

Query: 290 EFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            F        G+LLGD++     +  +     +     ++  +      A+ +A+ R   
Sbjct: 269 TFGAHGTPAVGWLLGDVHDGIAQMFQVIEYARMMVGTKAIGTLSAGYLTALEFAKERVQG 328

Query: 346 GG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
                          +   P ++R++           A+    A   D  +   E    +
Sbjct: 329 ADLTQMTDKTAPRVTITHHPDVRRSLMLQKAYAEGMRAVYTYTATFQDRIRLGDEGGGVS 388

Query: 394 RIMA--------PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             +A        PI K    + A   + ++++ +GGSG++++ +I ++ R++  +S+  G
Sbjct: 389 TELAEKVNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQDYAIEQYIRDAKIDSLYEG 448

Query: 446 SGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLA 501
           +      D L   ++         +   ++  + S +G   +   R+ +     D +G+ 
Sbjct: 449 TTAIQSQDFLFRKIVRDNGQALAHVAGEVQAFIDSDAGNGRLKEERELLRTALTDVQGML 508

Query: 502 RFLTEKI-ALASSAAALYRAGMNDI 525
             LT  + A A     LY+ G + +
Sbjct: 509 GSLTGYLYASAEDVKNLYKVGQHTV 533


>gi|221236120|ref|YP_002518557.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|220965293|gb|ACL96649.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 591

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/456 (18%), Positives = 145/456 (31%), Gaps = 59/456 (12%)

Query: 44  VALIANFPSVVHKELELLG--EYVLSCTAQELARMANYNTPQLHA----------YGPGG 91
            A++    S     L   G  + V +  AQ LA       P L                 
Sbjct: 159 RAVLNRLTSEAMTRLAAEGGSQAVKARIAQRLAEA--RGRPTLEQTGLDETFEMIRDQFH 216

Query: 92  ERWDK--VEFHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
              ++    F   WH         L++     G+        F      +      +   
Sbjct: 217 AFAEEKVTPFAHEWHLKDELIPLELVQELGELGVFGLTIPEEFGGSGMGKTAMCVVSEEL 276

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +  G L + S  +  ++    T    + W P+I S E  PT               
Sbjct: 277 SRAWIGVGSLATRSEIAGELILTGGTDAQKEYWLPRIASAEILPTAV------------- 323

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPR 260
            TE   G+D+ A+ ++ +   D         W   +  +D   +L + +        +  
Sbjct: 324 FTEPNTGSDLGALRTRAELKGDSYVVTGNKTWITHAARADVMTLLVRTDPATTDYRGLSM 383

Query: 261 LLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPV 309
           LL               G+    +   IG R     EL F          L      G  
Sbjct: 384 LLAPKPRGTDEAPFPAEGMSGGEI-GVIGYRGMKEYELGFDGFTVPAENLLGGVTGQGFK 442

Query: 310 EDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M       + +A  +V   + +L   + YA  R   G  + D P +   +A +A +I 
Sbjct: 443 QLMATFESARIQTAARAVGVAQAALEVGLSYALDRKQFGQPIFDFPRVHNKLAMMAAEIM 502

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L++  A+  DE K    EA  A+++A            A    A++  GG+G+  E
Sbjct: 503 GVRQLTYFAAHQKDEGKRCDLEAGMAKLIAARVA-------WAAADNALQIHGGNGFAME 555

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            + +R   ++   +I  G+G      +   L  G N
Sbjct: 556 YAASRLLADARILNIFEGAGEIQAQVIARRLLDGGN 591


>gi|311248913|ref|XP_003123376.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 474

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 114/325 (35%), Gaps = 34/325 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +    +          W  +SP++D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGAKTWITNSPVADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   +++ K   R++AT  +   +       + NV     
Sbjct: 229 EDN----CIRGFLLEKGMRGLSAPKIEGKFSLRASATGMIIMDDVEVP---EENVLPKAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   +S   +  AE     A  Y   R   G  L    +++R +AD+  
Sbjct: 282 SLAGPFGCLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K   E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKVTPE-------MVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNA 449
            +E  + RH     A +   G    
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGGAQV 419


>gi|254487039|ref|ZP_05100244.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214043908|gb|EEB84546.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 386

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 16/294 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +    ++   G + ++G K F+S  
Sbjct: 101 CEGDQIDRYLMPAVRGERMDALAMTEPGAGSDVRGMKCMARRDG-GDWVVNGTKHFISGA 159

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+          +     +   L D    G   +     + +R    + LEF +
Sbjct: 160 DHADFIIVFIATGEDETPKGPKKRITAFLVDRGTPGFTIRDGYKSVSHRGYKNMILEFDD 219

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     +        +  A MSV   R     A+ YA  R   G  + 
Sbjct: 220 CRLPDAQVLGEVDGGFEVMNTWLYATRITVATMSVGRARRVFDYALDYAATREQFGQKIG 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A+  D+          A       K +  +M   
Sbjct: 280 KFQGVSFQLADMITEIDAADLLTLAAADRLDKGLP-------ANREIASAKLYASEMLAR 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           V    ++  GG G +++  I R +R++    I  G+       +   + +    
Sbjct: 333 VTDATLQLHGGMGLMDDYPIERFWRDARVERIWDGTSEIQRHIISRDMLRALGA 386


>gi|229585995|ref|YP_002844497.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228021045|gb|ACP56452.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 398

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 122/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELKKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +   + +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMFVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|312129771|ref|YP_003997111.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906317|gb|ADQ16758.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 388

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 34/299 (11%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +      + PK+ S E+                 GLTE   G++   + +  ++ 
Sbjct: 107 IFEFGSEAQKAKYLPKLASGEW-------------LGSFGLTEPDFGSNPGGMLTHFREE 153

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D +       W  ++P  D  ++ A+ E GR+   +V R +E     G     +KNK  
Sbjct: 154 GDFLILNGSKTWISNAPFCDIAVVWAKNEQGRIKGLIVERGME-----GFSTPEIKNKWS 208

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++AT EL F          L  + G    +K    LD+A   +S   +  A      A
Sbjct: 209 LRASATGELVFDEVKVPKSNLLPGADGLRSPLK---CLDNARYGISWGAIGAAVDCYLTA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R      +    + ++ +A+   +I  A  L+++L  + +  K+ S + + A+ 
Sbjct: 266 KQYALERIQFDKPIASFQLTQKKLAEFLTEITKAQLLTWKLGVNKNAGKASSAQISMAKR 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                      MA  +  EA + +GG+G   E SI RH     +     G+ +  +L +
Sbjct: 326 NNVA-------MALNIAREARQILGGNGITGEFSIMRHMNNLESVITYEGTHDIHLLIL 377


>gi|294507759|ref|YP_003571817.1| acyl-CoA dehydrogenase [Salinibacter ruber M8]
 gi|294344087|emb|CBH24865.1| acyl-CoA dehydrogenase [Salinibacter ruber M8]
          Length = 786

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 152/413 (36%), Gaps = 43/413 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+ ++ P W  ++ R    G+   I    +  +        R   +          ++
Sbjct: 166 EIDQEQYIPEW--VIDRLFDMGVMGMIIPEEYGGLGLGVTSYNRVLEMIGRYCASTAVMV 223

Query: 153 SPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S   +     + +  T    + + P              +          L+E   G+D 
Sbjct: 224 SAHQSIGCKAIVMFGTEEQKEKYLP--------------LVAREELSAFCLSEPNVGSDA 269

Query: 212 AAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQ------VEGRVGCFLVPRLLED 264
           AA  S   K  DG Y L+G  KW  S  MS    ++ +        G +    V  L+  
Sbjct: 270 AAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELEQQGVNALIVT 329

Query: 265 GSPNGLCY-QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
              +G+   ++ + K G R        F++        L+     ++    L  L+    
Sbjct: 330 PDMDGVEVFEKNRAKTGIRGTWQARFRFNDVRVPEENVLHEEGAGLK--VALSCLNYGRC 387

Query: 324 SV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++        + +  + I +A+ R+     L D  ++K+ IA ++    A  A+ + +  
Sbjct: 388 TLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARMSAVTYAMDAMLYMMTG 447

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+ +          +   ITK +C      VI EA++ +GG GY+ E  + R +R++ 
Sbjct: 448 LLDQGEDDI------MVETAITKVFCSDFGWNVIDEALQVMGGEGYMTEHELERAWRDNR 501

Query: 439 ANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            + I+ GS   M   +       L EK  ++ E L    ++ +G +  +++T 
Sbjct: 502 IHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIGDNLSRILTA 554


>gi|254462692|ref|ZP_05076108.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206679281|gb|EDZ43768.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 386

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 121/386 (31%), Gaps = 28/386 (7%)

Query: 78  NYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           + +     +      +     D  +   A  AL+      G                   
Sbjct: 14  DRHRDLATSLDKWAAQNLSAIDHSDTDNACRALVAALGQGGWLEYAAIDPSGTAKLDVRS 73

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A    +        ++L        +W PK+             + 
Sbjct: 74  LCLIRETLARHDGLADFSFAMQGLGTGALSLFGADAQKAEWLPKV-------------RA 120

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                   LTE + G+D++  T     + D         W  +  ++D + + A+     
Sbjct: 121 GKAISAFALTEPQSGSDVSNSTMTAALVGDHYVINGEKTWISNGGIADVYTVFARTGEGE 180

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM 312
           G   +   +      GL        I     AT  L F +        +    +G    M
Sbjct: 181 GARGLSAFVVPADTPGLDVIERLETISPHPLAT--LSFKDCRVPASALIGQSGSGFKIAM 238

Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
            +L       A  ++   R +L EA+     RHV G  L D  +++  IAD+A+DI A+ 
Sbjct: 239 GVLDVFRSTVAAAALGFARRALDEALARVTSRHVQGAPLFDLQMVQGHIADMAVDIDASA 298

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            L +R A + D    R          A + K +    A  VI +A++  GG G    + +
Sbjct: 299 LLIYRAAWAKDSGAPR------VTREAAMAKLFSTDQAQKVIDKAVQLHGGDGVRTGQMV 352

Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456
              YRE  A  I  G+ +   + +  
Sbjct: 353 ESLYREIRALRIYEGASDVQRVIIAR 378


>gi|195398405|ref|XP_002057812.1| GJ17894 [Drosophila virilis]
 gi|194141466|gb|EDW57885.1| GJ17894 [Drosophila virilis]
          Length = 419

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 116/312 (37%), Gaps = 34/312 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   +    +    + + P              M +  +    GLTE   G+D A +
Sbjct: 126 SSLAMGAIYDYGSDEQKQKYLPS-------------MAQGKLIGAFGLTEPNHGSDPAGM 172

Query: 215 TSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++ +  S    Y L+G K W  S+P++D  I+ A+  +G+V  F+V R L   S  GL 
Sbjct: 173 ETRAKYDSKTKTYILNGSKTWITSAPIADVIIVWAKGEDGKVRGFIVDRKL---SGKGLD 229

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +++ K   R++ T  +   +        L  + G          L++A   ++   + 
Sbjct: 230 TPKIEGKFSLRASPTGMIMMDDVHVPEELLLPKALGFSAPFN---CLNNARYGIAWGALG 286

Query: 332 LAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            AEA       Y   R   G  L    ++++ +AD   +IA        +    D     
Sbjct: 287 AAEACVETARQYTLDRKQFGRPLAANQLIQKKLADATTEIALGLQACLHVGRLKDRKLHT 346

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E       M  + K      A  +  +  + +GG+G  +E  + RH     + +   G+
Sbjct: 347 PE-------MISLLKRNNAGKALDIARQMRDMLGGNGISDEYHVIRHVMNLESVNTYEGT 399

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 400 HDIHALILGRAI 411


>gi|78059862|ref|YP_366437.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964412|gb|ABB05793.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 242

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 14/246 (5%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
             M +  +   L +TE   G+D+ A+ ++ +++ D  Y L+G K F+++  ++   +++A
Sbjct: 5   PRMARGEIVGALAMTEPGAGSDLQALRTRAERVGDH-YVLNGTKTFITNGLLAGVLLVVA 63

Query: 248 QVEGRVGCFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           + +          L+ +     G    RL +KIG +   T EL F +        L    
Sbjct: 64  KTDPAKRAGGTSILIVETEDCPGFRVGRLLDKIGLKVQDTCELFFDDVRVPTDRVLGGVD 123

Query: 307 GPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           G      +L      L   +M+ + M  +    + Y R R   G  + +    +  +A+I
Sbjct: 124 GQGFYQIMLDLPYERLIIGVMAAAAMEGAYDATLDYVRNREAFGRPVAELQNTRFKLAEI 183

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  I A      R        +            A + K W  +    V+ E ++  GG 
Sbjct: 184 ATTIKATRCFIDRCVGDLVAGR-------LDIATASMAKLWGSEQQNRVVDEYLQLFGGY 236

Query: 423 GYIEER 428
           G++ E 
Sbjct: 237 GFMNEY 242


>gi|16127317|ref|NP_421881.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15]
 gi|13424741|gb|AAK25049.1| acyl-CoA dehydrogenase, putative [Caulobacter crescentus CB15]
          Length = 564

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/456 (18%), Positives = 145/456 (31%), Gaps = 59/456 (12%)

Query: 44  VALIANFPSVVHKELELLG--EYVLSCTAQELARMANYNTPQLHA----------YGPGG 91
            A++    S     L   G  + V +  AQ LA       P L                 
Sbjct: 132 RAVLNRLTSEAMTRLAAEGGSQAVKARIAQRLAEA--RGRPTLEQTGLDETFEMIRDQFH 189

Query: 92  ERWDK--VEFHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
              ++    F   WH         L++     G+        F      +      +   
Sbjct: 190 AFAEEKVTPFAHEWHLKDELIPLELVQELGELGVFGLTIPEEFGGSGMGKTAMCVVSEEL 249

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A +  G L + S  +  ++    T    + W P+I S E  PT               
Sbjct: 250 SRAWIGVGSLATRSEIAGELILTGGTDAQKEYWLPRIASAEILPTAV------------- 296

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPR 260
            TE   G+D+ A+ ++ +   D         W   +  +D   +L + +        +  
Sbjct: 297 FTEPNTGSDLGALRTRAELKGDSYVVTGNKTWITHAARADVMTLLVRTDPATTDYRGLSM 356

Query: 261 LLEDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPV 309
           LL               G+    +   IG R     EL F          L      G  
Sbjct: 357 LLAPKPRGTDEAPFPAEGMSGGEI-GVIGYRGMKEYELGFDGFTVPAENLLGGVTGQGFK 415

Query: 310 EDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
           + M       + +A  +V   + +L   + YA  R   G  + D P +   +A +A +I 
Sbjct: 416 QLMATFESARIQTAARAVGVAQAALEVGLSYALDRKQFGQPIFDFPRVHNKLAMMAAEIM 475

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L++  A+  DE K    EA  A+++A            A    A++  GG+G+  E
Sbjct: 476 GVRQLTYFAAHQKDEGKRCDLEAGMAKLIAARVA-------WAAADNALQIHGGNGFAME 528

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
            + +R   ++   +I  G+G      +   L  G N
Sbjct: 529 YAASRLLADARILNIFEGAGEIQAQVIARRLLDGGN 564


>gi|299132386|ref|ZP_07025581.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
 gi|298592523|gb|EFI52723.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2]
          Length = 395

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 129/395 (32%), Gaps = 39/395 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ++ DK       H L+      G+           +                   +   L
Sbjct: 30  DKCDKAFSPELAHQLMSILNPYGIGAGWLPEDAGGMGLSYLTSGMLYGELARLVPDVAGL 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S  +A  +    T      + P              M +  +     +TE   G+++
Sbjct: 90  AYVSEGAAMKIYRCGTAEQKARYLPG-------------MAEGRIIGCGAVTEPGTGSNV 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             + ++  +  DG        +  ++ ++D   +LA+       F +   + D S +   
Sbjct: 137 RQLRTRAVRDGDGWRLSGEKMFISNATVADISTVLART--GENEFGI--FILDRSVHKFE 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGM 328
              L+ K+G    +   +   N +      L      + +            A++S    
Sbjct: 193 SGELE-KLGLNGWSFGSITLDNVYIGDEFRLGDGASGLSEAMSGFERARAWVAVISSGIA 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +L +AI YA  R   G  +    ++++ +AD+A +  A   L+++   + D       
Sbjct: 252 RAALDDAIRYATERDQFGVPIAAHQLVQKLLADMACETEAMQLLTYKALAALDAGGRCDL 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                     + K +  + A  V + A++  G  G   E  + RH+R +   +I  G+  
Sbjct: 312 P-------TSMAKVYASEAAVRVASRAIQVHGACGVTREFPVERHFRNARMLTIPDGTTQ 364

Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
              L +   L             +   LG++G+K 
Sbjct: 365 INQLIIGRELT-----------EIPAFLGAAGRKT 388


>gi|149921157|ref|ZP_01909615.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149818044|gb|EDM77503.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 382

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 115/361 (31%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R     GL       ++  +        R    +     + G + S S    + VA
Sbjct: 40  REQWRACGEFGLLGLCVPEAYGGMGLSCVDTARMIEAFGYGCQDMGLVFSASAHQFACVA 99

Query: 164 ---LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
                 +  +  +    +                +      +TE   G+D +A+ +    
Sbjct: 100 PIVETGSEALKDELLADL-------------AAGTRVAANAMTEAEAGSDSSALKTTATL 146

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         +  + P+SD  ++ A V    G   +     D    GL      +K+G
Sbjct: 147 EGDHYRLNGIKSYASNGPVSDLLLVYANVNPAWGYMGITAFAVDRESPGLRVGEPFHKMG 206

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIH 337
             ++    + F +    +   +       +     ++ +        +  M+ +L +AI 
Sbjct: 207 LETSPIASVYFEDCMVPVSRRVGEEGDGAKIFANSMHWERGCLFAAYLGLMQRNLEQAIE 266

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R      +     +   I ++ + + +A  L +R     D   + + E A      
Sbjct: 267 YAKERRQFRRPIGSFQAVSHKIVNMRMRLDSARLLLYRACWLRDHGDTATAEIAM----- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             +K    + A     + ++  GG GY  E  + R  R+S A ++  G+       +   
Sbjct: 322 --SKVAVSEAAVQSGLDLIQIFGGIGYTREAQVERSLRDSVAATLFSGTSEIQRNLIAKE 379

Query: 458 L 458
           L
Sbjct: 380 L 380


>gi|125987055|ref|XP_001357290.1| GA21870 [Drosophila pseudoobscura pseudoobscura]
 gi|195156157|ref|XP_002018967.1| GL26099 [Drosophila persimilis]
 gi|54645621|gb|EAL34359.1| GA21870 [Drosophila pseudoobscura pseudoobscura]
 gi|194115120|gb|EDW37163.1| GL26099 [Drosophila persimilis]
          Length = 418

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 136/386 (35%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R ++ +       ++      G+            V   A+ +    +
Sbjct: 56  QAELLPRVKMANRLEQFD-----KKIMEEIGSLGVLGCTLKGYGCAGVSSVAYGLLTREV 110

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P              M +  +  G 
Sbjct: 111 ERVDSAYRSAVSVQSSLAMGAIYDYGSEEQKERYLPS-------------MAQGKLIGGF 157

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           GLTE   G+D A + +  +  S    Y L+G K W  S+P++D  ++ A+  +G++  FL
Sbjct: 158 GLTEPNHGSDPAGMETNAKYDSKTKTYILNGSKTWITSAPIADVLVVWAKCEDGKLRGFL 217

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +   S  GL   +++ K   R++ T  +   +        L  ++G          
Sbjct: 218 VDRKI---SGKGLDTPKIEGKFSLRASPTGMILMDDVRVPEEQLLPKASGFSGPFN---C 271

Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AEA       Y   R   G  L    ++++ +AD   +IA     
Sbjct: 272 LNNARYGIAWGALGAAEACVDIARQYTLDRKQFGRPLAANQLIQKKLADATTEIALGLQG 331

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             ++    D+     E       M  + K      +  +  +  + +GG+G  +E  + R
Sbjct: 332 CLQVGRLKDQKLHTPE-------MISLLKRNNTGKSLDIARQMRDMLGGNGISDEYHVIR 384

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 385 HVMNLESVNTYEGTHDIHALILGRAI 410


>gi|56695597|ref|YP_165948.1| isobutyryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56677334|gb|AAV94000.1| isobutyryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 564

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 215 EVIEELAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELIIA 274

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W P+I S E  PT                TE   G+D+ ++ ++  K  +G
Sbjct: 275 GGTVEQKASWLPRIASAEILPTAV-------------FTEPNTGSDLGSLRTRAVKDENG 321

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            + ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 322 DFKVTGNKTWITHAARTHVMTLLARTDPNTTDYRGLSMFLAEKTPGTDAEPFPTPGMTGG 381

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G+       + +      + +A  ++   +
Sbjct: 382 EIE-VLGYRGMKEYELGFDGFHVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQ 440

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ YA+ R   G  LI  P +   +A +A++I  A  L++  A   D       E
Sbjct: 441 SALDIAMQYAQDRKQFGRALIAFPRVSSKLAMMAVEIMIARQLTYFSAWEKDHGHRCDLE 500

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 501 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 553

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 554 QAQVIARRL 562


>gi|84501903|ref|ZP_01000061.1| Acyl-CoA dehydrogenase-like [Oceanicola batsensis HTCC2597]
 gi|84389898|gb|EAQ02532.1| Acyl-CoA dehydrogenase-like [Oceanicola batsensis HTCC2597]
          Length = 380

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 131/376 (34%), Gaps = 30/376 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +    +    G    ++      +                   +    
Sbjct: 29  RKCDREREYP--YEAYEKVAKQGWLGILFSEESGGLGGDIMDYALMCEGLAKYGFDFSTG 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +  +A  V    TP   + +               P     +   + ++E   G+D 
Sbjct: 87  LMVATFTAMNVEKFGTPEQKERYI-------------QPFLDGDIRFSISISEPGAGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM--LAQVEGRV-GCFLVPRLLEDGSPN 268
           A+  ++ ++  +G + L+G K + S   +D  I+  L + +        +   L   +  
Sbjct: 134 ASTKTRARRDGNG-WALNGQKLWCSGAAADNAILAMLTRTDPDAPKHKGLSVFLIPNNTE 192

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL  ++L   +  R+  T E+   +       LLG  N     + D   L  +  A   V
Sbjct: 193 GLDIRKLPT-MARRATGTTEIFVDDVKLPADALLGTENDGWKIITDHLELERVAVAAAYV 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + ++ +A+ YA  R      + D  V++  +AD+   + AA  L +R A+       
Sbjct: 252 GNAQTAVDDALRYAHERIQFDKPIFDFQVIRHMLADMQTQVDAARLLVYRAASLAAAKTP 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              E + A       K +  +    V    M+ +GG   + E  + R++RE   ++I  G
Sbjct: 312 CMREVSMA-------KLYASETLQTVTRNGMQILGGHSMLPEADMERYFREGMQSTIGGG 364

Query: 446 SGNAMVLDVLNLLEKG 461
           +       +   +  G
Sbjct: 365 TSQIQRTLIAKTMRPG 380


>gi|118470934|ref|YP_889512.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172221|gb|ABK73117.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 396

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 115/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL     +          A+ +    L  +       +      +   + 
Sbjct: 58  RELATEFGKLGLLGMHLEGYGCGGSSATAYGVACQELEAVDSGLRSMVSVQGSLAMFAIH 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P++ + E             V    GLTE   G++ + + +  ++   
Sbjct: 118 AHGSEEQREQWLPRMATGE-------------VIGCFGLTEPDFGSNPSGMRTTARRDGS 164

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  I+ A+ E  +  F+VP         G   + +K+K+  R+
Sbjct: 165 DWILNGSKMWITNGSVADVAIVWARSEDGILGFVVPT-----DTPGFVGREMKHKLSLRA 219

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL   +        L  + G    +  L          SV   R  L   + Y   
Sbjct: 220 SNTSELHLDDVRLPAEAQLPNARGLSGPLACLSEARFGIVFGSVGAARDCLEATLDYVGT 279

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  IAD+A++++ A  L+  L    D  +   E+         + K
Sbjct: 280 REVFDKTLASYQITQTKIADMAVELSKAQLLALHLGRLKDAGRISPEQ-------VSVGK 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  +  +    +G +G   E  + RH     +     G+     + +   L
Sbjct: 333 LNNVREALEIARQCRTLLGANGITLEYPVLRHANNLESVLTYEGTSEVHQMVIAQAL 389


>gi|54297867|ref|YP_124236.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris]
 gi|53751652|emb|CAH13074.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris]
          Length = 375

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 133/374 (35%), Gaps = 32/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +DK +  P           +G   +   + F      +         +       
Sbjct: 25  PHAKIFDKEQNIP--RDFFYTLAQNGFLGAGIPKQFGGQQWDELTIGIMHESFAKELCSL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++++     +  +    +    + W P+I + E                 L LTE   G
Sbjct: 83  ANILTVIGMVSKSLLQFGSKAQKQIWLPRIATGE-------------TLAALALTESNIG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +Q     D        K+     ++D F++LA  +G      +  +L +    
Sbjct: 130 SDLEHVETQLLDAGDEFILKGSKKYITLGQIADLFLVLANCQGE-----LTAVLVEKDTP 184

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM----- 323
           GL    + N +G RSN   E+ F N        L  + G   +  I   LD         
Sbjct: 185 GLIITPMSNFLGLRSNMLAEIFFDNCRIPKTNLLG-NIGIGFNCVIQTALDEGRYTTAYG 243

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   +  L  A+ Y ++R      L +  ++++ I ++ + I AA  L F         
Sbjct: 244 CVGLGQACLDAALGYTQKRKQFDRRLDEHQLIQKMITEMVVQIKAARELCFYA------G 297

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R ++         I KY   KMA  V   A++  G +G+ E   + R+YR++    I+
Sbjct: 298 ELRQQKNPAYIAETLIAKYAASKMAVFVSNHALQLFGAAGFEETYPVERYYRDAKVMEII 357

Query: 444 LGSGNAMVLDVLNL 457
            G+     + +  L
Sbjct: 358 EGTSQMHEILISKL 371


>gi|86135732|ref|ZP_01054311.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. MED193]
 gi|85826606|gb|EAQ46802.1| isobutyryl-CoA dehydrogenase [Roseobacter sp. MED193]
          Length = 561

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 137/369 (37%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+        F      +A  +  +       +  G L + S  +A ++  
Sbjct: 212 EVIEELAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLATRSEIAAELILC 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PKI S E  PT                TE   G+D+ A+ ++  K   G
Sbjct: 272 GGTDDQKEQWLPKIASAEILPTAV-------------FTEPNTGSDLGALRTRAVKTETG 318

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQ 273
            Y ++G+K +++ +  +    +LA+ +        +   L + +P          G+   
Sbjct: 319 DYEITGNKTWITHAARTHVMTLLARTDPETTDHRGLSMFLAEKTPGTDEAPFPTPGMTGG 378

Query: 274 RLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     EL F          L G        + +      + +A  +V   +
Sbjct: 379 EIE-VLGYRGMKEYELGFDGFAVKQANLLGGAEGKGFKQLMETFESARIQTAARAVGVAQ 437

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  ++ YA+ R   G  LI+ P +   +A +A++I  A  L++  A   D       E
Sbjct: 438 SALDISMQYAQDRKQFGKSLINFPRVSGKLAMMAVEIMVARQLTYFSAWEKDHGHRCDLE 497

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++         ++A A     ++  GG+G+  E  I+R   ++   +I  G+   
Sbjct: 498 AGMAKLL-------GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEI 550

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 551 QAQVIARRL 559


>gi|163854857|ref|YP_001629155.1| putative acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258585|emb|CAP40884.1| putative acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 389

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 138/377 (36%), Gaps = 32/377 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-- 147
            D  +   A   L+      G       +  D ++   + +   ++       +A+ +  
Sbjct: 34  IDHHDTDAACRKLVASLGDAGWLRYCVPAGPDGAWGGALPQVDSRMVCILRETLARHDGL 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  +ALM +  + + + P++                       L+E   
Sbjct: 94  ADFALAMQGLGSGAIALMGSDALRRKYLPRV-------------AAGQAIAAFALSEPDA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA++   +   D         W  +  ++D + + A+     G   +   + +   
Sbjct: 141 GSDVAALSCSARADGDHYVLDGAKTWISNGGIADFYCVFARTGEAPGARGISAFVVEAGT 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL        +     AT  L F N        L     G    M  L       A  +
Sbjct: 201 PGLDIAERIEVMAPHPLAT--LAFDNCRIPASQRLGEPGQGFKLAMMTLDIFRASVAAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EA 383
           +   R +L EA+  AR R + G  L D  + + A+ D+A  I AA  L++R A   D + 
Sbjct: 259 LGFARRALDEAVSRARGRRMFGQALADLQLTQAALGDMATAIDAAALLTYRAAWLRDVQG 318

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EAA A++ A        + A AVI  A++  GG+G +    + + YRE  A  I 
Sbjct: 319 VRTTREAAMAKMAA-------TESAQAVIDRALQMFGGAGVVSGMPVEKLYREIRALRIY 371

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+     L +   L K
Sbjct: 372 EGATEVQKLIIARELLK 388


>gi|47220275|emb|CAG03309.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 406

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 142/427 (33%), Gaps = 40/427 (9%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
            ++   A  A  P      L+L G+          +   +Y   +L        R +   
Sbjct: 3   ENTPKQAKSAKVPFNWRDSLDLEGQLTEEEIMIRDSFR-DYCHEKLMPRVLMANRHE--H 59

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           FH     ++      G+                A+ + A  +  +       +   S   
Sbjct: 60  FH---REIISEMGEMGVLGPTIKGYGCAGTSYVAYGLIAREVERVDSGYRSVMSVQSSLV 116

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              ++   T    + + P++   E             +    GLTE   G+D + + ++ 
Sbjct: 117 MHPISAYGTEAQKEKYLPRLARGE-------------ILGCFGLTEPNHGSDPSGMETRA 163

Query: 219 Q--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +    SD         W  +SP++D  ++ A+ +       V   + +    G    +++
Sbjct: 164 RYNPSSDTFSISGAKSWITNSPVADIAVVWAKCDDDR----VRGFILERGMKGFSTPKIE 219

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
            K   R++AT  +            L  ++G          L++A   +S   +  AE  
Sbjct: 220 GKFSLRTSATGMILMDEVEVPKDNLLPNASGLAGPFG---CLNNARYGISWGALGAAEFC 276

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  Y   R   G  L    +M++ +AD+  +I         L    D+ K+  E   
Sbjct: 277 FHTARQYTLDRIQFGVPLARNQLMQKKMADMLTEITIGLQSCLALGRLIDQKKAVPE--- 333

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               M  + K   C  A  +  +A + +GG+G  +E  I RH     + +   G+ +   
Sbjct: 334 ----MISMLKRNSCGKALDIARQARDMLGGNGISDEYHIIRHVMNLESVNTYEGTHDIHA 389

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 390 LILGRAI 396


>gi|83950248|ref|ZP_00958981.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
 gi|83838147|gb|EAP77443.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM]
          Length = 385

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/370 (20%), Positives = 128/370 (34%), Gaps = 31/370 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLM 152
            D  +   A  AL+      G          EP  R    ++   R  L      A    
Sbjct: 34  IDHGDTDAACRALVAALGKAGWLNHAAVDPAEPDGRLDVRRLCLIRETLARHDGLADFAF 93

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        ++L  T    ++W P +             ++        LTE   G+D+A
Sbjct: 94  AMQGLGTGALSLFGTRAQREEWLPLV-------------RRGEAISAFALTEPASGSDVA 140

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
             T    +  D         W  +  ++  + + A+ E   G   +   +      G   
Sbjct: 141 NSTMTATRDGDDYILNGEKTWISNGGIASVYTLFARSEDMPGAKGLSAFVVPAGLPGFEV 200

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVS 326
                 I     AT  L F+     +   +     P E  KI +          A  ++ 
Sbjct: 201 SERLETIAPHPLAT--LRFTECRIPVSAMIG---KPGEGFKIAMSVLDVFRSTVAAAALG 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L E++   R+RHV G  L +  +++  IAD+ALDI A+  L +R A + D     
Sbjct: 256 FARRALDESLDRVRKRHVQGAPLAELQMVQGHIADMALDIDASALLVYRAAWAKDSG--- 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              AA     A + K +  + A  VI  A++  GG G      + R YRE  A  I  G+
Sbjct: 313 ---AARVTREAAMAKLFSTEQAQKVIDRAVQLHGGDGVRSGAVVERLYREIRALRIYEGA 369

Query: 447 GNAMVLDVLN 456
            +   + +  
Sbjct: 370 SDVQRVIIAR 379


>gi|187921789|ref|YP_001890821.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187720227|gb|ACD21450.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 402

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 115/323 (35%), Gaps = 25/323 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 97  ADFALAMQGLGSGAISLGGTHEQKTRYLPRV-------------ANGTALAAFALSEPEA 143

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+    ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 144 GSDVAAMALSAREDGDTYVLDGDKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADT 203

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+         L     G    M+ L       A  S
Sbjct: 204 PGLEIAERIDVIAPH--PLARLHFAGARVPRSQMLGAPGEGFKLAMRTLDIFRTSVAAAS 261

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE I  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 262 LGFARHAMAEGISRAASRKMFGQTLGDFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 321

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           + + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 322 NVTREAAMAKWHA-------SEGAQQVIDAAVQLFGGMGVQSGTAVEMLYREIRALRIYE 374

Query: 445 GSGNAMVLDVLNLLEKGTNLFEQ 467
           G+     L +   L K       
Sbjct: 375 GATEVQQLIIGRDLLKAHAAATA 397


>gi|226294512|gb|EEH49932.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 425

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 83/465 (17%), Positives = 149/465 (32%), Gaps = 65/465 (13%)

Query: 2   TLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL 61
           +LR + R ++ N   + + +    N        N ++ D L           +       
Sbjct: 12  SLRAVKRPISGNLGRRYAHATAGFNWEDPLAASNLFTEDEL----------AIQDTARQY 61

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
            +  L+    E  R  NY+                         ++R     GL  +  +
Sbjct: 62  CQEQLAPRILEAYRNENYD-----------------------KKIIREMGELGLLGATIE 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 V   A  +    +  +       +   S    + +    TP     + P++   
Sbjct: 99  GYGCAGVSTVASGLITKEVERIDSGYRSGMSVQSSLIMTGIYEFGTPEQKDKYLPEL--- 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLSSP 238
                      K       GLTE   G+D  ++ +  +      G Y +SG K W  +SP
Sbjct: 156 ----------AKGKKLGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSP 205

Query: 239 MSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           +SD F++ A+    G++  F++ R   D  P G      +KNK   R++ T  ++  +  
Sbjct: 206 ISDYFLVWAKLETTGKIKGFIIER---DQCPPGTFETPAIKNKTALRASITGMIQMDSCP 262

Query: 296 GFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQ 352
                                   L  A  ++  +   +  A  YA  R    G  L   
Sbjct: 263 VPEANMFPDVEGLRGPFTCLNSARLGIAFGTMGALEDCIDRARSYALERKQFKGNPLAKY 322

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            ++++ +AD   D A  T  + +++   DE K+       A  M  + K   C  A A  
Sbjct: 323 QLVQKKLADATTDAAYGTLAAIQVSRLKDEGKA-------APEMISMIKRQNCDKALAGA 375

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
               E  GG+   +E  I RH           G  +      + L
Sbjct: 376 RTLQEIFGGNVASDEYHIGRHVANLFVTQTYEGQSDIHSKQFICL 420


>gi|111020601|ref|YP_703573.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820131|gb|ABG95415.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 399

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 118/311 (37%), Gaps = 21/311 (6%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V   +      TP   + +               P  +      + ++E   G+D +A 
Sbjct: 89  TVWRPANPLTHATPEQRERYLI-------------PGARGDRRDAVAISEANAGSDFSAA 135

Query: 215 TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           ++      +G Y ++G KWF++   ++D  I+LA VE      +    L D    G+  +
Sbjct: 136 STTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPEHAATI---FLIDVDTPGVKIK 192

Query: 274 RLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +            E  F N       +LG +        D      L     ++     
Sbjct: 193 HIPRYTHTFVYEHPEFTFENVRVGEDAVLGGIGQGHDLTRDWFTEERLMIGARTIGAAER 252

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ +AR R   G  LI++ +++  IAD  +DI    AL+ ++A  FD+A     + 
Sbjct: 253 ALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRALTHQVAWEFDQADPHDADL 312

Query: 391 AYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A   K    + +  V   A++  GG GYI +  + R +RE   + I  G+   
Sbjct: 313 RKTLHAKAATVKLAASEASNRVADRAVQIFGGRGYIRDYPVERLWRELRVDRIWEGTSEI 372

Query: 450 MVLDVLNLLEK 460
             L + N   K
Sbjct: 373 QRLVIANEANK 383


>gi|118467571|ref|YP_886806.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118168858|gb|ABK69754.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 399

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 107/357 (29%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL            +   A+ +    L          +      +   + 
Sbjct: 61  RELAVELGELGLLGMHLKGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIH 120

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      W P + S                    GLTE   G+D A + ++  +  D
Sbjct: 121 AFGSDEQKDQWLPDMASGH-------------RIGCFGLTEPDHGSDPAGMRTRATRSGD 167

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +  +  F+VP         G     +K+K+  R+
Sbjct: 168 DWILTGTKMWITNGSVADVAVVWARTDEGIRGFVVPT-----DTPGFTANTIKSKMSLRA 222

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL            L  +T     ++ L          ++   R  L  A+ YA  
Sbjct: 223 SVTSELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACS 282

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R      +    + ++ +AD+ L+      L+  L    D  +        A     + K
Sbjct: 283 REQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGE-------LAPEQVSLGK 335

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  +   A   +G SG   E  + RH     +     G+     L +   L
Sbjct: 336 LNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQAL 392


>gi|145221687|ref|YP_001132365.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145214173|gb|ABP43577.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 464

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/416 (18%), Positives = 155/416 (37%), Gaps = 45/416 (10%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    +LAR A+     +    P    +D+ +  P W  L   +   G +  ++ R    
Sbjct: 8   TAAQHDLARRAHEFAEDVVR--PVAAEYDQRQEFP-WPVLEE-AATRGFYSPLFYRDLIG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L+       G  +     + S +    +P     WAP+ F       
Sbjct: 64  DPTGLSLPMFMEELF-WGCAGIGLAVVMPALALSAIGQAASPEQMLQWAPECFGT----- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFL-SSPMSDA 242
                 K      L ++E  GG+D+  + +  ++     D  + + GHK ++ +  +++ 
Sbjct: 118 --PGDLK---LAALAISEPEGGSDVRNLRTTARRAGPEPDADWIIDGHKMWIGNGGIANV 172

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V+  +G       +  G   GL   R  +K+G R++ T EL+F++        L
Sbjct: 173 HVVNAVVDQELGHKGQALFVVPGGTPGLDMVRKLDKLGCRASHTAELKFNSVRVPADHLL 232

Query: 303 N----------VSTGPVEDMK----------ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                       +   VE  +                 A  ++   R +L     YA RR
Sbjct: 233 GGQEKLDHKLARAREAVEGGRHSGSATLGTFEQTRPMVAAQALGIARAALEYVTEYANRR 292

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              GG +ID   +   +AD+A  + AA  L++R +                     ++K 
Sbjct: 293 EAFGGPIIDNQGISFPLADLATGLDAARLLTWRASWMAATGVPFER------GEGSMSKL 346

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              ++A      A++ +GG GY+++  + + YR++   +I  G+     + + N L
Sbjct: 347 AASELAVRATERAIQTMGGYGYVKDHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402


>gi|258511432|ref|YP_003184866.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478158|gb|ACV58477.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 582

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/461 (16%), Positives = 154/461 (33%), Gaps = 56/461 (12%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL R++   GL       ++  +       +  +            +   S  +   + 
Sbjct: 59  KALYRKAGELGLIGVDLPEAYGGLELDPLSSLLVSETLGETAGFGVSINIHSGVALHPIL 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                     + P++ + E             V     LTE   G+D     +  ++   
Sbjct: 119 YFGDEAQRAVYLPQLAAGE-------------VIASYALTEPDAGSDALHGKTSARRDEA 165

Query: 224 -GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y LSG K ++S+  ++  +++ AQ+  R     +   + D    G+   + ++K+G 
Sbjct: 166 RGCYVLSGQKQWISNARVAGVYVVFAQLANR----GMTAFVVDRDRPGVSVGKEEHKVGI 221

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ T  L   +       LLG           +  L     A+ ++   R ++  A  Y
Sbjct: 222 HASPTASLILDDVEVPESALLGAPGHGHRIALSVLNLARHKMALYALGQTRRAIRIAAAY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-- 396
           A+ R   G  +    +++  +  +A     A + ++R A      K R+ + A    +  
Sbjct: 282 AKERRQFGVPIASFGMIREKLGYMAARYFVARSAAYRTAGELAPGKKRALDLALRPDLEP 341

Query: 397 -----------------APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
                              + K    ++   VI EA++  GG GY+E+  IAR YR++  
Sbjct: 342 EEKVRGVASALSSCIAACSLNKVLATEVQAFVIDEAVQIHGGYGYMEDYEIARMYRDARI 401

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
             I  G+     L  +  L   +   E    +L      +    +     +  L    +G
Sbjct: 402 TRIFEGTNEINRLAAVRDLLS-SRAREASACSLSDPSSPAASPSLAAHLPAGRLRSTLEG 460

Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLE---NRFLDN 537
                      A  A    + G + + +  L     R  D 
Sbjct: 461 -----------AEQALRAMKTGFDAVVEAALAREGARLADQ 490



 Score = 38.4 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
             ++   L+ A  ++  M+      +  A  R   G  L DQ  + R +AD  + + A  
Sbjct: 451 AGRLRSTLEGAEQALRAMKTGFDAVVEAALARE--GARLADQQALVRRLADAKMWLYAFE 508

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +   R+A + D      +  A    +A +      +     + EA   +G
Sbjct: 509 SALVRVALAADARGPARDLGA---ELAAVAWADAVRHGFTPLLEAARHVG 555


>gi|229004640|ref|ZP_04162378.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus mycoides Rock1-4]
 gi|228756681|gb|EEM05988.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus mycoides Rock1-4]
          Length = 354

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 126/368 (34%), Gaps = 32/368 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMS 153
           D  +  P   +L+++    G   + +   +  +      + +    +          +  
Sbjct: 2   DNKKVFP--KSLIKKMAERGFLSASFPLKYNGLEMDPVQYGLFTEEIGKACCSTRTLITI 59

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +      +    T      W  KI              K        L+E   G+D   
Sbjct: 60  QTSLIGESILRYGTKEQKDYWLTKI-------------SKGEKLGAFCLSEPTHGSDAKN 106

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           I ++ ++  + I+     KW   + ++D FI+LA              + D    G+   
Sbjct: 107 IQTRYKREREKIFITGKKKWISFAGIADFFIVLATSN----QGYTTAFIVDRYSKGIKVN 162

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +     +R+    E+EF+N        L  + G      +   LD    SV+   V LA
Sbjct: 163 EIDGIFASRATHIAEIEFNNVEVPEENILG-NEGSGFTFIVSTALDHGRYSVAWGGVGLA 221

Query: 334 -EAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            EA+     YA+ R      + +  +++  I D    + AA AL  +        + R +
Sbjct: 222 QEALEVMTSYAKNRVQFDTAIHNHQLVQGMIGDSVTSLHAARALCLKA------GEMRKK 275

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A       KY+  K+A  +  +A++ +G +G +      R +RE+    I+ G+  
Sbjct: 276 NDIDAINETNFAKYFSSKVAMKIATDAVQVLGANGCLNTYPTERLFREAKVLEIIEGTSQ 335

Query: 449 AMVLDVLN 456
              L   N
Sbjct: 336 LQQLFAAN 343


>gi|108799585|ref|YP_639782.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119868695|ref|YP_938647.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770004|gb|ABG08726.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119694784|gb|ABL91857.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 611

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/516 (17%), Positives = 176/516 (34%), Gaps = 73/516 (14%)

Query: 32  IGMNAYSS---DSLLVALIANFPSVVHKELELLGE---YVLSCTAQELARMANYNTPQLH 85
           I  N +     D LL      +  +  + +  + E    +      E    A+ +     
Sbjct: 11  IEFNLFEVLGVDRLLDDGC--YGDLDTETVRHIFEEVVRLAEGPLAESYVQADRHP---I 65

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +         V   P   ++L      G             +           +   A 
Sbjct: 66  RFDAASHEV--VVTDPLRKSVLAL-KEAGWWRLGIPEDIGGTLAPMPMVWAVREILHSAN 122

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L A         +A  +  + TP   + WA             A   +   A  + LTE 
Sbjct: 123 LSAAFFNLGPEMAA-ALWEVGTPEQ-RRWA-------------AVAMERGWAGTMVLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RV 253
             G+D+ A  ++  + SDG + ++G K F+S             ++LA+ +G       +
Sbjct: 168 DAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPGTKGL 227

Query: 254 GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             F VP+ L D       S NG+    +++K+G +S+ T E+ F       G+L+GD++ 
Sbjct: 228 SMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGRDQPAIGWLVGDVHN 287

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
               +  +     + + +MS   +      A+ YA+ R                  +I  
Sbjct: 288 GIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTRIQGPDLTRTSDKTAPRVPIIRH 347

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE---------AKSRSEEAAYARIMAPITKYW 403
           P ++R++           AL    A   D                 A    ++ P+ K  
Sbjct: 348 PEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLLLPVVKAV 407

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG 461
             + A   +  +++  GGSGY+++  + ++ R+   N++  G+      D+L   ++   
Sbjct: 408 SSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLLFRKIIRDD 467

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               + +   + +   S+G       R  ++   ED
Sbjct: 468 GQTLDHVLGLIVKFTESAGGSTFQQERALLATAIED 503


>gi|67522485|ref|XP_659303.1| hypothetical protein AN1699.2 [Aspergillus nidulans FGSC A4]
 gi|40745663|gb|EAA64819.1| hypothetical protein AN1699.2 [Aspergillus nidulans FGSC A4]
 gi|259487040|tpe|CBF85392.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_4G08490) [Aspergillus nidulans FGSC A4]
          Length = 564

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 158/477 (33%), Gaps = 59/477 (12%)

Query: 13  NQVHQPSDSLFALNQPP--LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70
            Q  QP D   A +  P   +  +  ++  S      + + +  H  L            
Sbjct: 101 PQAAQPVDVSSAQSAGPQDPYGDLIPFADPSWYQGYHSPYFNQTHAALR--------AEV 152

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVV 128
           +E                P    WD+ +  PA  +  +  R    GL    +   + P  
Sbjct: 153 REWVE---------KEIEPYVTEWDEAKEVPAKIYKQMGERGYLAGLLGVKYPTQYTPHR 203

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPT 186
            +          + M   +            +++       P + K     +  R     
Sbjct: 204 VQSVAPENWDLFHEMLLTDELSRAGSGGLVWNLIGGYGIGCPPLVKYGKKALVDR----- 258

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIM 245
               +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +   +  
Sbjct: 259 ILPGILAGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGVWSDYFT 318

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDL 302
            A   G  G   +  LL +    G+  +R+ +  G  S+ T  + F +       L+G  
Sbjct: 319 TAVRTGGPGMNGISVLLIEREAGGVSTRRM-DCQGVWSSGTTYVTFEDVKVPVENLIGKE 377

Query: 303 NVSTGPV-------------EDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHV 344
           N                   E + I+   +   + +        RV   E++ YA +R  
Sbjct: 378 NQGFKGKSSQPYFVVASVLTEYLVIMTNFNHERIGIIIQCLRFSRVCYEESMKYAHKRRT 437

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L++ PV++  +A +A  I A+      L N   + +S  E  A  ++   I     
Sbjct: 438 FGQKLVNHPVIRMKLAHMARQIEASYNW---LENIIFQCQSMEETEAMLKLGGAIAGLKA 494

Query: 405 --CKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
                      EA +  GG  Y        I R YR+  A +I  GS   M+   + 
Sbjct: 495 QSTTTFEYCAREASQIFGGLSYSRGGQGGKIERLYRDVRAYAIPGGSEEIMLDLSMR 551


>gi|226362825|ref|YP_002780603.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241310|dbj|BAH51658.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 399

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 21/311 (6%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V   +      TP   + +               P  +      + ++E   G+D +A 
Sbjct: 89  TVWRPANPLTHATPEQRERYLI-------------PGARGDRRDAVAISEANAGSDFSAA 135

Query: 215 TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           ++      +G Y ++G KWF++   ++D  I+LA VE      +    L D    G+  +
Sbjct: 136 STTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPDNAATI---FLIDVDTPGVKIK 192

Query: 274 RLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +            E  F N       +LG +        D      L     ++     
Sbjct: 193 HIPRYTHTFVYEHPEFTFENVRVGADAVLGGIGQGHDLTRDWFTEERLMIGARTIGAAER 252

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ +AR R   G  LI++ +++  IAD  +DI    AL+ ++A  FD+A     + 
Sbjct: 253 ALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRALTHQVAWEFDQADPNDADL 312

Query: 391 AYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  A   K    + +  V+  A++  GG GYI +  + R +RE   + I  G+   
Sbjct: 313 RKTLHAKAATVKLAASEASNRVVDRAVQIFGGRGYIRDYPVERLWRELRVDRIWEGTSEI 372

Query: 450 MVLDVLNLLEK 460
             L + N   K
Sbjct: 373 QRLVIANEANK 383


>gi|110677990|ref|YP_680997.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
 gi|109454106|gb|ABG30311.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114]
          Length = 387

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 103/294 (35%), Gaps = 16/294 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +       P  +      L +TE   G+D+  +     +   G + ++G K F+S  
Sbjct: 102 CEGDQIERYLMPAVRGERMDALAMTEPGAGSDVRGMKCAAVRKG-GDWVVNGTKHFISGA 160

Query: 239 M-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +D  I+          +     +   L D    G   +     + +R    + L+F +
Sbjct: 161 DHADFIIVFIATGEDQTPKGPKKRITAFLVDRGTPGFTIRDGYKSVSHRGYKNMILDFDD 220

Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+++     +        +  A MSV   R     A++YA  R   G  + 
Sbjct: 221 CRLSDAQVLGEVDGGFEVMNTWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQKIG 280

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   +AD+  +I AA  L+   A+  D+          A       K +  +M   
Sbjct: 281 KFQGVSFQLADMVTEIDAADLLTLAAADRLDKDLP-------ANREIASAKLYASEMLAR 333

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           V   A++  GG G +++  + R +R++    I  G+       +   L +    
Sbjct: 334 VTDAAVQIHGGMGLMDDYPLERFWRDARVERIWDGTSEIQRHIISRDLLRALGA 387


>gi|311248915|ref|XP_003123377.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like isoform 2
           [Sus scrofa]
          Length = 462

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 114/325 (35%), Gaps = 34/325 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 110 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQKYLPRL------------- 156

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +    +          W  +SP++D F++ A+ 
Sbjct: 157 AKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGAKTWITNSPVADLFVVWARC 216

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   +++ K   R++AT  +   +       + NV     
Sbjct: 217 EDN----CIRGFLLEKGMRGLSAPKIEGKFSLRASATGMIIMDDVEVP---EENVLPKAS 269

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   +S   +  AE     A  Y   R   G  L    +++R +AD+  
Sbjct: 270 SLAGPFGCLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLT 329

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K   E       M  + K   C  A  +  +A + +GG+G 
Sbjct: 330 EITLGLHACLQLGRLKDQDKVTPE-------MVSLLKRNNCGKALDIARQARDMLGGNGI 382

Query: 425 IEERSIARHYRESPANSILLGSGNA 449
            +E  + RH     A +   G    
Sbjct: 383 SDEYHVIRHAMNLEAVNTYEGGAQV 407


>gi|78060999|ref|YP_370907.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77968884|gb|ABB10263.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 384

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 115/355 (32%), Gaps = 28/355 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  RS   GL                   +       +      +++ P   +  M+  +
Sbjct: 51  LDERSRQLGLWGLDAPLDAGGADLPAVAMVGV--NEAIGTTVTPYILPPDSPNLRMLCDV 108

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
                   +               P  +      + ++E   G+D  A+++   +  DG 
Sbjct: 109 ADDAQRARYLD-------------PYARGVTRAAMAISEPGAGSDPGALSTTAVRDGDGW 155

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  W   +  +D  I++A  +   G    +   + D    G   +R    IG    
Sbjct: 156 VLNGRKIWISHATEADWTIVMALTDRSKGKRGGMSAFIVDRDTPGFIIERRIPMIG--GL 213

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           +T E+   N       LLG       P++       L+ A   +     ++A    +A++
Sbjct: 214 STYEIVLENCRIPAVQLLGREGAGFAPMQARLANRRLEMAAWCIGRAERAVALLCDHAKQ 273

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L ++  ++  +AD    I A   +++  A   D  +        AR    + K
Sbjct: 274 RKTFGVPLAERQAIQWWVADALTQIHACRLMTYEAAARVDAGQD-------ARTQISMVK 326

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +  +MA  VI  AM+ +G  G  +E  + +   E+    I  G        V  
Sbjct: 327 VFATEMAWRVIDHAMQTLGAMGMTKEMPLQQMASEARLMRIFEGPTEVHRWVVAR 381


>gi|4894856|gb|AAD32627.1|AF135399_1 AidB [Thermus thermophilus]
          Length = 447

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 106/468 (22%), Positives = 181/468 (38%), Gaps = 63/468 (13%)

Query: 33  GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
           G N Y +D  L  L+ +F P    +E                         +L  +   G
Sbjct: 7   GKNHYEADPELRDLLRHFWPGAGDRE------------------------AELVMHDLDG 42

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+V   P    +L+R                P     +     A  YL+A      +
Sbjct: 43  NRVDRVRLSPVQREVLKRLR----------PIVRPPYEGGSWHHHFALGYLLADGGLYCI 92

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++ +   A  +           +AP + S       K  +          +TE +GG+D+
Sbjct: 93  LTITHQVAYPIH---------KYAPGLASW------KERVLYGEAFGATWMTEIQGGSDL 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVGCFLVPRLLED 264
            A   +G +  +      G K+F S   ++D  ++ A+ EG       +  FL+PRL  +
Sbjct: 138 GANPHRGPQEGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLPRLDRE 197

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G  N    +RLK K G R+  + E+E   +  +L+G          +   +  L +AI +
Sbjct: 198 GRLN-YRVRRLKRKSGTRAVPSGEVELEGSERYLIGRAEEGIYYTLETLTVSRLANAIAA 256

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     +L E     RRR   G  L D P+++  + D+++  A   AL+     +FD A 
Sbjct: 257 MGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALALAAVEAFDRAW 316

Query: 385 SRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 A    + R ++ + K    + +  +   AME  GG G++EE ++AR +RES   
Sbjct: 317 HERPLTARPTTWPRFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHRESLIT 376

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            I  G  N   LD+L  ++K         + LE  L   G++     R
Sbjct: 377 PIWEGPSNIQALDLLEAMQK-KGAHRPFLAWLEARLKGRGEEAEGPWR 423


>gi|258651115|ref|YP_003200271.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554340|gb|ACV77282.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 409

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 133/367 (36%), Gaps = 27/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      L+ +    G+          P + + A  +    L          +  
Sbjct: 57  WERAEFP---FELVPKLAKLGIVGGAIQGYGCPGLSRLAQGMVTLELSRGDGSVNTFIGV 113

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + ++ +P   + W P + +                     LTE + G+D  A
Sbjct: 114 QSGLAMGSINMLGSPEQKQRWLPGLAT-------------LDKIGAFALTEPQHGSDSVA 160

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLC 271
           + +  ++  D        +W  +  +    I+ A+   +G+V  F+V +  +   P G  
Sbjct: 161 LETSARRDGDHWVLNGSKRWIGNGSIGHVVIVWARDEADGKVKGFVVEKDDQGAYPEGYT 220

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329
            + +  KIG R+    ++   N        L  + G  +  ++L      ++  +     
Sbjct: 221 AELITGKIGKRAIWQPDIVLDNVRVPEANRLAHANGFRDVSRVLTATRGGASWEAAGHAV 280

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YA  R      +    +++  +A +  +  A   + FR+A   ++ K     
Sbjct: 281 AAYEAALTYATHRQQFSKPIAAYQLVQNKLATMLAETTAIQLMCFRMAQLQEQGK----- 335

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 MA + K +    A ++ AEA + +GG+G + +  +ARH  +        G+ + 
Sbjct: 336 --LTGPMASMAKMYTASTARSICAEARDILGGNGLLLDFHVARHMTDMEVVHTYEGTDSI 393

Query: 450 MVLDVLN 456
             L +  
Sbjct: 394 QSLIIGR 400


>gi|332796168|ref|YP_004457668.1| acyl-CoA dehydrogenase [Acidianus hospitalis W1]
 gi|332693903|gb|AEE93370.1| acyl-CoA dehydrogenase [Acidianus hospitalis W1]
          Length = 378

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 14/273 (5%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG 251
           K      + LTE   G+D+ A+ +  +   D +  L+G K F S+   S   ++LA+  G
Sbjct: 113 KAKEIYAVALTEPAAGSDLGALQTTAKPDGDEL-VLNGEKIFTSAASFSTKMVVLARTSG 171

Query: 252 RVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
             G    +  LL D    G+   +L + +G R      ++F+N       ++G    +  
Sbjct: 172 NPGDKNGISLLLIDSKLPGIEIHKL-DLMGIRGAGVSYVKFNNVRIPKDSIIGKEGDAFR 230

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                 ++     A ++V   R ++ EAI+ A  R   G  LI+Q  +   +AD  + + 
Sbjct: 231 GAIKALMISRNGYAGIAVGIARGAVEEAINRAATRKQFGKALIEQEWIGFNLADAYIKVE 290

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L++R A+  D+      EA+ A+  A +T       A      A+   GG G    
Sbjct: 291 AARLLTWRAASLLDKGVEALTEASMAKYFAAVT-------AAETTRTALHIFGGHGLNRG 343

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             + R YR++    I  G+    +L V    ++
Sbjct: 344 SKVERLYRDAKIMEIAEGTNEMQLLAVSRSFQQ 376


>gi|315503175|ref|YP_004082062.1| butyryl-CoA dehydrogenase [Micromonospora sp. L5]
 gi|315409794|gb|ADU07911.1| Butyryl-CoA dehydrogenase [Micromonospora sp. L5]
          Length = 390

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 116/375 (30%), Gaps = 58/375 (15%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +  +           +  +  +L    +       A  + 
Sbjct: 48  RELQLKAKKFGFWGLATPEEYGGMDLP-----AVMQSLIWTELGRSFVPFRFGGEADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    +++               P  +        +TE   G+D A I  + ++  D
Sbjct: 103 FHATEEQKREFLI-------------PTIEGERISCFAITEPGAGSDAANIKLRARRDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIG 280
             + L G K F+++   +D  I++A  +   G         L D +            +G
Sbjct: 150 D-WVLDGEKTFITNGNDADFAIVVAVTDPEKGARRGGATAFLVDRT------------MG 196

Query: 281 NRS---NATVE-----LEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM-----SVS 326
            RS       E     L F          L  +  G    M    ++          ++ 
Sbjct: 197 WRSEFIQTMGEGGPASLIFDGVRVPHRNILGEIGQGFTLGM---EWIGKGRYTIPSHAIG 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +L  AI +A  R   G  +     ++  IAD   ++ AA  L  R A + D+    
Sbjct: 254 IAERALQMAIDHANTRETFGAPIATNQAIQWMIADSETELEAARWLILRSAWTVDQGLDP 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              ++         K +   M   V+   ++  GG GY  E  I R YR+     I  G+
Sbjct: 314 RHASSMG-------KLYGAGMVNRVVDRVLQIHGGMGYTRELPIERWYRQVRLYRIFEGT 366

Query: 447 GNAMVLDVLNLLEKG 461
                L +   L +G
Sbjct: 367 DEMQRLIISRDLLRG 381


>gi|238620980|ref|YP_002915806.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|238382050|gb|ACR43138.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 398

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELKKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +  L+ +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMLVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|118617473|ref|YP_905805.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99]
 gi|183982286|ref|YP_001850577.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M]
 gi|118569583|gb|ABL04334.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99]
 gi|183175612|gb|ACC40722.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M]
          Length = 609

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/539 (16%), Positives = 179/539 (33%), Gaps = 72/539 (13%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+  A  A+ N P    + P       +         ++         
Sbjct: 42  LSEAARLAEGPVAETFAA-ADRNPPV---FDPATH---SISVPDELVKTVQAIKDAEWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +                A  E     +PS     +      P + +    +
Sbjct: 95  LGLAEEIGGMPAPPP--------LTWAVNEMIFCANPSAGFFIL-----GPTMAQSLYAE 141

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
               E      A   +      + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 142 --GNEEQRRWAAMGIERGWQATMVLTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISG 199

Query: 238 PMSDA------FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                       ++LA+ EG       +  F VP  L D      G  NG+    L++K+
Sbjct: 200 GDVGDTSENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLEHKM 259

Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T E+ F        G+L+G ++     +  +     +   + S   +      A
Sbjct: 260 GLKSSPTCEVTFGATDVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSSGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + YA+ R                  ++  P ++R++           AL    A   D+A
Sbjct: 320 LAYAKERVQGADLTQMTDKTAPRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + P+ K    + A  ++ E+++ +GGSG++ +  I ++ R+
Sbjct: 380 VAQRVSGADHDMAHRVDDLLLPVVKGVGSERAYEILTESLQTLGGSGFLSDYPIEQYIRD 439

Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           +  +S+  G+     LD     ++       + + + + Q + +    +        +  
Sbjct: 440 AKIDSLYEGTTAIQSLDFFFRKIVRDHGQALQFVTAQITQTIDNVDPSLKPQAELLQTAL 499

Query: 495 KEDKGLARFLTEKIALASS-AAALYRAGMN------DIADVFLENRFLDNCHSTHCMLH 546
            +   +   LT  +  A+     +Y+ G+        + D+ +  R L      H  L 
Sbjct: 500 DDVTAMTGTLTTYLMSAAQHPTDIYKVGLGSVRYLLAVGDLIIGWRLLVQAGVAHAALA 558


>gi|17546481|ref|NP_519883.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum
           GMI1000]
 gi|17428779|emb|CAD15464.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 625

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/515 (17%), Positives = 171/515 (33%), Gaps = 87/515 (16%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHIIPEVKTALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP                 T   P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQ-------------IETFVQPELEGRFYGTMCLSEPQAGSSLSDIAT 178

Query: 217 QGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +   +      Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGVKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L       G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVGADGALGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQFRPKGPDGQPRAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------ 350
           +L+G+ +     +  M     +   + +          A+ YAR R   G  +       
Sbjct: 299 YLVGEPHQGLACMFHMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPIGPAGKDA 357

Query: 351 --------DQPVMKRAIADIALDIAAATALSFRLANSFDE---------AKSRSEEAAYA 393
                   D   ++R +      +  A  L+   A   DE         A +R+      
Sbjct: 358 ASPQVRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGAESEGDADARATLGLLL 417

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            I+ PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD
Sbjct: 418 DILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLD 477

Query: 454 VLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--------DSISLCKEDKGLARF 503
           +L   ++ +    F  L   ++  +  +       L          + SL K  + L   
Sbjct: 478 LLGRKVVMQDGAAFAALGRRVQATVARALDSGDAALAGWGRALGMAAQSLAKVTQQLWAA 537

Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538
              ++ LA+++  L   G   IA ++LE       
Sbjct: 538 GDPRVTLANASVYLEAFGHVVIAWIWLEQALAAAR 572


>gi|126435228|ref|YP_001070919.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235028|gb|ABN98428.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 611

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/516 (17%), Positives = 176/516 (34%), Gaps = 73/516 (14%)

Query: 32  IGMNAYSS---DSLLVALIANFPSVVHKELELLGE---YVLSCTAQELARMANYNTPQLH 85
           I  N +     D LL      +  +  + +  + E    +      E    A+ +     
Sbjct: 11  IEFNLFEVLGVDRLLDDGC--YGDLDTETVRHIFEEVVRLAEGPLAESYVQADRHP---I 65

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
            +         V   P   ++L      G             +           +   A 
Sbjct: 66  RFDAASHEV--VVTDPLRKSVLAL-KEAGWWRLGIPEDIGSTLAPMPMVWAVREILHSAN 122

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L A         +A  +  + TP   + WA             A   +   A  + LTE 
Sbjct: 123 LSAAFFNLGPEMAA-ALWEVGTPEQ-RRWA-------------AVAMERGWAGTMVLTEP 167

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RV 253
             G+D+ A  ++  + SDG + ++G K F+S             ++LA+ +G       +
Sbjct: 168 DAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPGTKGL 227

Query: 254 GCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304
             F VP+ L D       S NG+    +++K+G +S+ T E+ F       G+L+GD++ 
Sbjct: 228 SMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGGDQPAIGWLVGDVHN 287

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQ 352
               +  +     + + +MS   +      A+ YA+ R                  +I  
Sbjct: 288 GIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTRIQGPDLTRTSDKTAPRVPIIRH 347

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE---------AKSRSEEAAYARIMAPITKYW 403
           P ++R++           AL    A   D                 A    ++ P+ K  
Sbjct: 348 PEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLLLPVVKAV 407

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG 461
             + A   +  +++  GGSGY+++  + ++ R+   N++  G+      D+L   ++   
Sbjct: 408 SSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLLFRKIIRDD 467

Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
               + +   + +   S+G       R  ++   ED
Sbjct: 468 GQTLDHVLGLIVKFTESAGGSTFQQERALLATAIED 503


>gi|315446576|ref|YP_004079455.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315264879|gb|ADU01621.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 464

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 76/416 (18%), Positives = 154/416 (37%), Gaps = 45/416 (10%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +    +LAR A+     +    P    +D+ +  P W  L   +   G +  ++ R    
Sbjct: 8   TAAQHDLARRAHEFAEDVVR--PVAAEYDQRQEFP-WPVLEEAAAR-GFYSPLFYRDLIG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +  +    L+       G  +     + S +    +P     WAP+ F       
Sbjct: 64  DPTGLSLPMFMEELF-WGCAGIGLAVVMPALALSAIGQAASPEQMLQWAPECFGT----- 117

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFL-SSPMSDA 242
                 K      L ++E  GG+D+  + +  ++     D  + + GHK ++ +  +++ 
Sbjct: 118 --PGDLK---LAALAISEPEGGSDVRNLRTTARRAGPEPDADWIIDGHKMWIGNGGIANV 172

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A V+  +G       +  G   GL   R  +K+G R++ T EL+F++        L
Sbjct: 173 HVVNAVVDQELGHKGQALFVVPGGTPGLDMVRKLDKLGCRASHTAELKFNSVRVPADHLL 232

Query: 303 N----------VSTGPVEDMK----------ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
                       +   VE  +                 A  ++   R +L     YA RR
Sbjct: 233 GGQEKLDHKLARAREAVEGGRHSGSATLGTFEQTRPMVAAQALGIARAALEYVTEYANRR 292

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +ID   +   +AD+A  + AA  L++R +                     ++K 
Sbjct: 293 EAFGAPIIDNQGISFPLADLATGLDAARLLTWRASWMAATGVPFER------GEGSMSKL 346

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              ++A      A++ +GG GY+++  + + YR++   +I  G+     + + N L
Sbjct: 347 AASELAVRATERAIQTMGGYGYVKDHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402


>gi|254466955|ref|ZP_05080366.1| short-chain specific acyl-CoA dehydrogenase [Rhodobacterales
           bacterium Y4I]
 gi|206687863|gb|EDZ48345.1| short-chain specific acyl-CoA dehydrogenase [Rhodobacterales
           bacterium Y4I]
          Length = 386

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 121/366 (33%), Gaps = 26/366 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D  +   A  AL+      G        + E +  +    IR           A    +
Sbjct: 34  IDHSDTDAACRALVAALGEAGWTRHSGAEAGETLDVRTLCLIR--ETLARHDGLADFAFA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   ++L  TP    +W P               +         LTE + G+D+A 
Sbjct: 92  MQGLGTGAISLFGTPEQQAEWLPL-------------TRAGKAVSAFALTEPQSGSDVAN 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            T       D         W  +  ++D + + A+     G   +   +      G    
Sbjct: 139 STMTATLDGDHYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFVVPAGLPGFEVV 198

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
             +  I     AT  L F+         L     G    M +L       A  ++   R 
Sbjct: 199 ERQQVIAPHPLAT--LRFTGCRIPKSALLGQPGQGFKIAMSVLDVFRSTVAAAALGFARR 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L EA+     R V G  L +  +++  IAD+ALD+ A+  L +R A + D        A
Sbjct: 257 ALDEALARVSERQVQGAPLFELQMVQGHIADMALDVDASALLVYRAAWAKDSG------A 310

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A     A + K +    A  VI +A++  GG G    + +   YR+  A  I  G+ +  
Sbjct: 311 ARVTREAAMAKLFSTDQAQQVIDKAVQLHGGDGVRRGQKVEELYRDIRALRIYEGASDVQ 370

Query: 451 VLDVLN 456
            + +  
Sbjct: 371 RVVIAR 376


>gi|16081378|ref|NP_393708.1| isovaleryl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728]
 gi|10639373|emb|CAC11375.1| probable isovaleryl-CoA dehydrogenase [Thermoplasma acidophilum]
          Length = 382

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 134/372 (36%), Gaps = 31/372 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
           + D+ ++ P      R     G         +        A  I    L   +   A   
Sbjct: 29  KIDRDDYFPVDK--FRMMGKMGYLGVTVPPEYGGSGAGYIAQAIIEDELGYSSPSLALSY 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            + S      +    +  + + + PK+ S +Y                L LTE   G+D 
Sbjct: 87  GAHSNLCLDNIYRNGSKYIRETFVPKLASGDY-------------IGSLCLTEPGSGSDA 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            A+++   ++   +Y      +  ++P +D F++ ++ +G         ++   S  G  
Sbjct: 134 LAMSTHIDEVDGELYLSGSKMFITNAPYADLFLVHSR-DGD----GYSSVIVLASDGGFN 188

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R   K+G R + T E+ F+      G ++G        +        +  A + +   
Sbjct: 189 RGRSLEKMGMRGSPTGEIFFNRVRIEPGRIVGGRGSGKKIIMSGLNSERVILAFIFIGLA 248

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R ++ EA++YA +R   G  + D  +++  ++ + +   A+  L+FR            +
Sbjct: 249 RRAIDEAVNYASQRKQFGQHIADFELIQEKLSYMYVRYEASRMLAFRALEKL-------Q 301

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 I A     +  + A  +  EA++  GG GYI++  I    R++    I  G+  
Sbjct: 302 FDMMDPIDAASAIMYASESAEYIAREAIQIFGGYGYIKDTGIEMLLRDAILGQIGAGTTE 361

Query: 449 AMVLDVLNLLEK 460
                +   L K
Sbjct: 362 IRKRVIARSLVK 373


>gi|21220243|ref|NP_626022.1| acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256788642|ref|ZP_05527073.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289772537|ref|ZP_06531915.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
 gi|10799845|emb|CAC12923.1| putative acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289702736|gb|EFD70165.1| acyl CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 397

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 142/409 (34%), Gaps = 42/409 (10%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G+       
Sbjct: 26  DLAVRDTVRSWA--ADRVLPHIADWYESGEL-------PGIRELAREL--GGIGALGMSL 74

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                    A +   A L L A        +      +   +    +    ++W P++  
Sbjct: 75  EGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEGQRQEWLPRMAG 134

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-M 239
            E             V    GLTE   G+D A + +  ++ + G + L+G K ++++  +
Sbjct: 135 GE-------------VIGCFGLTEPDHGSDPANMRTNAKRDTGGDWVLNGRKMWITNGSV 181

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +   ++ AQ E  +  F+VP         G     +K+K   R++ T EL   +      
Sbjct: 182 AGVAVVWAQTEEGIRGFVVPT-----DSPGFSAPEIKHKWSLRASVTSELVLDDVRLPAD 236

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L  +TG    +  L          S+   R S   A+ YA+ R   G  +    + + 
Sbjct: 237 AVLPEATGLRGPLSCLSHARYGIVWGSMGAARSSFEAAVEYAKSREQFGRAIGGFQLTQA 296

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A  
Sbjct: 297 KLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIDICRTART 349

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 350 ILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 397


>gi|299068474|emb|CBJ39697.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum CMR15]
          Length = 401

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 128/354 (36%), Gaps = 27/354 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR 169
            +   +  + +  + E +  +    IR           A    +     +  ++L  TP 
Sbjct: 57  WLRHAVGGTAYGGAGEAIDTRAICLIR--ETLARHSGLADFAFAMQGLGSGAISLHGTPA 114

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  K+   E                   L+E   G+D+AA+    +   D      
Sbjct: 115 QRAHYLAKVARGE-------------AIAAFALSEPEAGSDVAAMACAARADGDSYVLDG 161

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
              W  +  ++D +++ A+     G   +   + +    G       + I         L
Sbjct: 162 EKTWISNGGIADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPH--PLARL 219

Query: 290 EFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F++        +     G    M+ L       A  ++   R +L EA+  A  R +  
Sbjct: 220 RFTDCRIPADQRVGAAGEGFKVAMRTLDVFRTSVAAAALGFARRALDEALARATTRKMFN 279

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G+L D  + +  +A +A  I +A  L++R A   D+ +S + EAA A++ A        +
Sbjct: 280 GVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TE 332

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  VI  A++  GG G + E+ + R YRE  A  I  G+     L +   L +
Sbjct: 333 NAQQVIDAAVQMWGGLGVVSEQPVERLYREIRALRIYEGATEVQQLIIARDLLR 386


>gi|284990873|ref|YP_003409427.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
 gi|284064118|gb|ADB75056.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
          Length = 407

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 124/367 (33%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      L  +    GL     +    P +   +  +    L          L  
Sbjct: 60  WERAEFP---RELAEKLGAAGLVGDGIEGYGCPPMDALSAGLVHMELNRGDGSLGTFLGV 116

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +   +A++ +    + W P             PM +        LTE   G+D  A
Sbjct: 117 QAGLAMKSIAMLGSEEQKQRWLP-------------PMARCEALGAFALTEPDHGSDSIA 163

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  ++  +        KW  +  ++D  ++ A+             L +    G   +
Sbjct: 164 LETSARRDGESYVLNGSKKWIGNGTIADVVVVWARDTDDGQVKG---FLVEKGTQGYRAR 220

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
           R++ K   R+    E+E  +        L       +   +L       A M++      
Sbjct: 221 RIEGKGSLRAVWQAEIELEDVRVPAENMLPGGRSFKDTGAVLATTRGSCAWMALGHAVAG 280

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA RR   G  L++  +++  +  +   + +      RLA+     +       
Sbjct: 281 YEAALTYAGRRKQFGKPLVEFQLIQERLVGMLAKVTSMQLYCRRLADLALAGRIEP---- 336

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               +A + K      A AV+AEA + +GG+G + +  + RH  +  +     G+     
Sbjct: 337 ---TLAGLAKAHNTSTARAVLAEARDLLGGNGILLDFHVIRHMADIESIHTFEGTETIQT 393

Query: 452 LDVLNLL 458
           L V   +
Sbjct: 394 LIVGRDI 400


>gi|238062332|ref|ZP_04607041.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237884143|gb|EEP72971.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 386

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 116/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                A+ +    L          +      +   + 
Sbjct: 48  RELAREFGRLGLLGMHLTGYGCAGSTAVAYGLACLELEAGDSGVRSLVSVQGSLAMYAIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P             PM         GLTE   G+D A++ ++ ++  D
Sbjct: 108 RYGSEEQKRRWLP-------------PMATGEAIGCFGLTEPDHGSDPASMATRARRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                 G  W  ++P++D  ++ A+ E  V  F VP         G+  + ++ K+  R+
Sbjct: 155 DWLLHGGKMWITNAPVADVAVIWARAEEGVRGFAVPL-----DAPGVSVREMRRKMSLRA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          ++   R  L   + YA  
Sbjct: 210 SVTGEIALDDVRLPADALLPGAAGLKAPLSCLTEARHGIVWGALGAARDCLETTLGYATT 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + +  +AD+A++      L+  L    D  + R E+         + K
Sbjct: 270 RTQFGRPLAGFQLTQAKLADMAVEWQKGFLLALHLGRLADAGRLRPEQ-------VSVGK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  I RH     +     G+     L +   L
Sbjct: 323 LNNVREALAIARQCRTILGANGVSGEYPIMRHANNLESVLTYEGTSEIHQLVIGQRL 379


>gi|99082079|ref|YP_614233.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040]
 gi|99038359|gb|ABF64971.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040]
          Length = 384

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 114/315 (36%), Gaps = 30/315 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  T     +W PK  S              +      LTE + 
Sbjct: 85  ADFAFAMQGLGTGAISLFGTDAQKAEWLPKTRSG-------------AAIAAFALTEPQS 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T    +  D         W  +  ++D + + A+     G   +   +     
Sbjct: 132 GSDVANSTMTAVRDGDDYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDL 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
           +G         I     AT  L FS+        +     P +  +I +          A
Sbjct: 192 DGFEVVERLETIAPHPLAT--LRFSDVRIPASAMIG---APGQGFRIAMSVLDVFRSTVA 246

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R +L EA+     RHV G  L D  +++  IAD+ALD+ AA  L +R A + D
Sbjct: 247 AAALGFARRALDEALWRVTERHVQGAPLFDLQMVQGHIADMALDVDAAALLVYRAAWTKD 306

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                   AA     A + K +  + A  VI +A++  GG G      + + YRE  A  
Sbjct: 307 SG------AARVTREAAMAKLFSTEAAQVVIDKAVQLFGGEGVRSGAMVEKLYREIRALR 360

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+ +   + +  
Sbjct: 361 IYEGASDVQRVVIAR 375


>gi|297161666|gb|ADI11378.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 398

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/413 (16%), Positives = 126/413 (30%), Gaps = 37/413 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            +L    +  +  T ++ A  A    PQ+  +   GE        P    L R     G 
Sbjct: 21  DDLLAPDDLAVRTTVRQWA--ATRVLPQIADWYERGEL-------PGIRELARELGSLGA 71

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                            + +    L          +      +   +    +    + W 
Sbjct: 72  LGMSLTGYGCTGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKERWL 131

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P             PM    +    GLTE   G+D AA+ +  ++            W  
Sbjct: 132 P-------------PMAAGEIIGCFGLTEPDHGSDPAAMRTYAKRDGSDWVLTGRKMWIT 178

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A+ +  +  F+VP         G     +++K   R++ T EL      
Sbjct: 179 NGSVAGVAVVWARTDEGIRGFVVPT-----DSPGFSAPEIRHKWSLRASVTSELVMDEVR 233

Query: 296 GFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L   TG    +  L          S+   R     A+ YA  R   G  +    
Sbjct: 234 LPADAVLPEVTGLRGPLSCLSHARYGIVWGSMGAARACFEAALEYAGSREQFGRPIGGFQ 293

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +AD+A+++     L+  L    D    R E+ ++        K    + A  +  
Sbjct: 294 LTQAKLADMAVELHKGVLLAHHLGMRMDAGTLRPEQVSFG-------KLNNVREAIEICR 346

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A   +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 347 TARTILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 398


>gi|271970138|ref|YP_003344334.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270513313|gb|ACZ91591.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 607

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 75/487 (15%), Positives = 160/487 (32%), Gaps = 64/487 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +    +     +   P    + P       V     +          G         
Sbjct: 47  RLATGVLADSFEEGDRKPPV---FDP---VTSTVTMPEGFKKSFAAYRDAGWTNLGLPAE 100

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   +     A + L +        S    +  M                +   E 
Sbjct: 101 LNGPGLPNSVNWALAEMVLGSNPAIWMYASGPAFAHVMH---------------VIGTEA 145

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA- 242
                    +      + LTE   G+D+ A  ++  +  DG + + G K F++S   D  
Sbjct: 146 QKRYAELAIEKQWGATMVLTEPDAGSDVGAGRAKAVRQDDGTWHIEGVKRFITSAEHDMA 205

Query: 243 ----FIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNAT 286
                ++LA+ EG       +  FLV +   D      G  NG+    ++ K+G + + T
Sbjct: 206 DNIFHLVLARPEGHGVGTKGLSMFLVSKYHVDLETGELGERNGVYVTNVEKKMGLKVSTT 265

Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            EL F       G L+G+++     +  +     +     +++ +      A+ YAR R 
Sbjct: 266 CELTFGEKHPAVGTLIGEVHEGIKQMFMIIEHARMMVGTKAIATLSTGYLNALEYARTRV 325

Query: 344 VSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAK 384
                            +   P ++R +           AL    A   D       E +
Sbjct: 326 QGADLTQMADKSAPRVTIAHHPDVRRELMLQKSYAEGMRALVLLTATYQDAVQIAAFEGR 385

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                 A   ++ P+ K    + +  ++A +++ +GGSGY+++  I ++ R++  +S+  
Sbjct: 386 RDEHAEAMNDLLLPLVKGVGSERSYELLARSLQTLGGSGYLQDYPIEQYIRDAKIDSLYE 445

Query: 445 GSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           G+     LD+    +L         L+  ++    ++ +     L++   L  E     +
Sbjct: 446 GTTAIQGLDLFFRKVLRNQGVALGTLYGDIKAF--AASEAGNGRLKEERKLLDEAADEVK 503

Query: 503 FLTEKIA 509
            + + +A
Sbjct: 504 AMADTLA 510


>gi|330825795|ref|YP_004389098.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329311167|gb|AEB85582.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 633

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 99/599 (16%), Positives = 194/599 (32%), Gaps = 102/599 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +                           R+A     P          R+D 
Sbjct: 20  TLDFLLYDWLRAASLTARPRFADHSRETFDAVLDTCERIAREKYAPFNRTVDTQEPRFDG 79

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      H   +     G+  +  D     +      +  A   +  A +  G  +  
Sbjct: 80  EKVILPQCTHDARQAYADSGMLGAAQDYELGGMQLPYVVESAANSFFACASISIGSNL-L 138

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ + +  TP   + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 139 TTGNANAILVHGTPMQQRVFAANEFNGRWAGT-------------MCLSEPQAGSSLSDI 185

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++ +    G         Y L G+K ++S+   +       ++LA++ G          
Sbjct: 186 ATRAEPDGAGFEADPLGPRYRLRGNKMWISAGDHELTENIVHLVLAKIPGPDGKPVPGVK 245

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN------------ 293
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 246 GISLFIVPKKLVDTEGKLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGRYPVRAGQGGG 305

Query: 294 -------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                    G+L+G        +  M     +   + +          ++ YAR R   G
Sbjct: 306 LDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAATMLGLAGYYASLDYARTRLQ-G 364

Query: 347 GIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA- 391
             +              I+   +KR +         A AL+   A   DE ++    AA 
Sbjct: 365 RPIGSGGKDASSPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLVDEGRTGDAGAAA 424

Query: 392 ----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                  ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+ 
Sbjct: 425 DARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTH 484

Query: 448 NAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK---------VITILRDSISLCKE 496
                 L    ++ +G    + L  T+   +  + ++         +   LRD I   + 
Sbjct: 485 GIQAADLLGRKVVMQGGAGLQLLARTVAVTIAKARQRPGLAAWAGQLEQALRDVIDATRA 544

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFL---ENRFLDNCHSTHCMLHGRFNAA 552
                       ALA++   +   G   +A ++L   ++    +   +     GR  AA
Sbjct: 545 AWATGNA---GEALANAVPYMQAFGHVVLAWMWLDVADSVLAKDASLSIAASVGRMGAA 600


>gi|197101403|ref|NP_001127611.1| glutaryl-CoA dehydrogenase, mitochondrial [Pongo abelii]
 gi|55732530|emb|CAH92965.1| hypothetical protein [Pongo abelii]
          Length = 438

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  Y   R   G  L    ++ + +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYTLDRMQFGVPLARNQLILKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDMHALILGRAI 428


>gi|254419531|ref|ZP_05033255.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185708|gb|EDX80684.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 599

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 91/529 (17%), Positives = 175/529 (33%), Gaps = 72/529 (13%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             + +       R A+ N P        GER   +   P     L      GL  +  D 
Sbjct: 48  AQLAADMFAPHNRKADQNEPTF-----DGERVTMI---PEVAEALAAFREAGLFSASQDY 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +      +      +  A +        ++ +A+++    T      +        
Sbjct: 100 DLGGLQLPNVIERAGFAWFQAANVGTAAYPFLTIGAANLLKTHGTAAQVDAYV------- 152

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241
                  PM +      + L+E + G+ +  I ++    +DG Y L G K ++S    D 
Sbjct: 153 ------RPMLEGRFFGTMCLSEPQAGSSLGDIRTRAVPQADGSYRLFGSKMWISGGDHDL 206

Query: 242 ----AFIMLAQVEGR-VGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNAT 286
                 ++LA++EG   G   +   +            G  N +    L +K+G R    
Sbjct: 207 SETIVHMVLARMEGAPAGVKGISLFVVPKHLLDENGAPGERNDVVLAGLNHKMGYRGTTN 266

Query: 287 VELEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
             L F              G+L+G  +     +  M     +     + +        A+
Sbjct: 267 TLLNFGEGRHAPGGQGGAVGWLVGAPHQGLAAMFHMMNEARIGVGAGAAALGYTGYLHAL 326

Query: 337 HYARRRHVSGG-----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--- 382
            YAR R                 +I+   ++R +         A  L+   A   D+   
Sbjct: 327 DYARGRPQGRPLSAKDPASPPVPIIEHADVRRMLLAQKAYAEGALGLNLYCARLTDDQTT 386

Query: 383 ---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              A  R        ++ PI K W  +      + A++ +GG GY  +  + + YR++  
Sbjct: 387 AEDAAERDRAGRLLDMLTPIAKSWPSQWCLEGNSLAIQVLGGYGYTRDYPVEQFYRDNRL 446

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKE 496
           N I  G+     LD+L    +  G +  + L  T+   +  +SG   +    ++++    
Sbjct: 447 NPIHEGTHGIQGLDLLGRKAIMDGGSGLKLLGETVMATVARASGDGELAPYSEALAEAMG 506

Query: 497 DKGLARFLTEK-----IALASSAAALYRAGMNDIADVFLENRFLDNCHS 540
             G A     +      ALA+++  L   G   +A ++LE        +
Sbjct: 507 RIGAATATVWQGGDPERALANASTYLEAVGHAVMAWIWLEQALAAAGKT 555


>gi|119476267|ref|ZP_01616618.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119450131|gb|EAW31366.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 561

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 142/376 (37%), Gaps = 46/376 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-----AHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            +L+ +   G   S     F  ++           +    L   +   AG L++    +A
Sbjct: 199 EILKPAAELGCFGSSIPERFGGLMPDDRDDSLGMIVVTEELSRGSLGAAGSLITRPEIAA 258

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    TP   + W P++ S E                 + +TE   G+D+A+I+ +  
Sbjct: 259 RALLKGGTPAQQQQWLPRLASAE-------------TLCAISITEPDFGSDVASISLKAT 305

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSP---------- 267
              +G        W   +  ++  + LA+ +    +G   +   L +             
Sbjct: 306 PTENGWLLNGSKTWCTFAGQAELLVTLARTDTDSGLGFKGLSMFLVEKPAFSGHQFDYQQ 365

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLD 319
              G    +  + IG R   + +L F + F      +    G  +     +       + 
Sbjct: 366 PQGGRLIGKSISTIGYRGMHSFDLFFEDYFVAENNLVGGEEGKGKGFYFTMAGLSGGRIQ 425

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +A  +   M+ +  +A+ YAR R V    + +  + +  +A +   I A+   S+ +A  
Sbjct: 426 TAARATGVMQAAFEQAVSYARERKVFAKPIGEYQLTQVKLARMLAAITASRQFSYAVARM 485

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+ K + E        A + K + C+ A  V  EAM+  GG GY EE +++R++ ++  
Sbjct: 486 MDDGKGQME--------ASLVKLFSCRSAEWVTREAMQIHGGMGYAEETAVSRYFVDARV 537

Query: 440 NSILLGSGNAMVLDVL 455
            SI  G+   + L V+
Sbjct: 538 LSIFEGAEETLALKVI 553


>gi|227831521|ref|YP_002833301.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|284999073|ref|YP_003420841.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
 gi|227457969|gb|ACP36656.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|284446969|gb|ADB88471.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
          Length = 398

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELKKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +  L+ +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMLVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|311108076|ref|YP_003980929.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762765|gb|ADP18214.1| acyl-CoA dehydrogenase, N-terminal domain protein 15 [Achromobacter
           xylosoxidans A8]
          Length = 382

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 133/362 (36%), Gaps = 31/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAH--KIRAARLYLMAQLEAGHLMSPSVTSASM 161
             + +R    GL    +  +       +     +R    YL +Q  A    + +      
Sbjct: 41  KHVFQRWGDLGLLGVRYPEADGGSGLDKVSDCIVREELSYL-SQGFASTWSAHTHLGIWP 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    TP     +              AP        G GL+E  GG+++ A+ ++ +++
Sbjct: 100 IWKAGTPAQKARFL-------------APALAGRKVAGFGLSEPDGGSNVRAMKTRAERV 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G        +  ++P +D  ++ A+    +    +   + +    G    +LK K G 
Sbjct: 147 EGGWRLHGSKLYITNAPFADFLLVAARTSPELRPESISLFIVELPNPGFDISKLK-KEGI 205

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-- 339
           R++ T  +   + F      L  + G      IL  L    + V+   + +A A   A  
Sbjct: 206 RASETALIHIDDAFVPDDCLLGETEGTYP--LILESLSENRVGVAANALGMARAAFDAAT 263

Query: 340 ---RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
                R V+G  +     +   +A+++  I AA  L +  A   D+    +  AA  +++
Sbjct: 264 AYANDRLVAGKRIGQYQAIGHKLAEMSAQIEAARWLVYYGAWRVDQGTLDAATAARVKLV 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        + A +V  +A+   GG+G + E  + R +R++    I  G+       + N
Sbjct: 324 A-------SETAVSVSEQAIRIFGGAGIMREYPVGRIHRDALVYIIGEGTSEIQKNIIAN 376

Query: 457 LL 458
            L
Sbjct: 377 SL 378


>gi|17548257|ref|NP_521597.1| acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
 gi|17430503|emb|CAD17187.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 399

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 127/363 (34%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSVTSAS 160
            AL+R     G   H                  I   R  L      A    +     + 
Sbjct: 44  RALVRLLGEAGWLRHAVGGTAHGGAGETIDTRAICLIRETLARHSGLADFAFAMQGLGSG 103

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++L  TP     +  K+   E                   L+E   G+D+AA+    + 
Sbjct: 104 AISLHGTPAQRARYLAKVARGE-------------AIAAFALSEPEAGSDVAAMACAARA 150

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +  ++D +++ A+     G   +   + +    G       + I 
Sbjct: 151 DGDSYVLDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIA 210

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
                   L F++        +     G    M+ L       A  ++   R +L EA+ 
Sbjct: 211 PH--PLARLRFTDCRIPAGQRVGAAGEGFKVAMRTLDVFRTSVAAAALGFARRALDEALA 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            A  R +  G+L D  + +  +A +A  I +A  L++R A   D+ +S + EAA A++ A
Sbjct: 269 RATTRKMFNGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A  VI  A++  GG G + E+ + R YRE  A  I  G+     L +   
Sbjct: 329 -------TENAQQVIDAAVQMWGGLGVVSEQPVERLYREIRALRIYEGATEVQQLIIARD 381

Query: 458 LEK 460
           L +
Sbjct: 382 LLR 384


>gi|111018621|ref|YP_701593.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818151|gb|ABG93435.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 395

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/408 (18%), Positives = 136/408 (33%), Gaps = 31/408 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           V    ++ LA              P  +R +  E  P    ++      G    +  R +
Sbjct: 9   VGIPESEYLALRDRIFEAIWAELDPLEQRIEDDEQVP-HDIVMPILERIGALGLLVPREY 67

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A  +     +   Q     ++    + A  ++ + + R   D  P   +    
Sbjct: 68  GGSGLSIAQYLPIIAEFAKVQGALRVIVHVHNSFAHALSEIGSDRQKADVLPGTATGRN- 126

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAF 243
                       ++   LTE   GT  A + S   +  DG Y L+G KW   +S ++  F
Sbjct: 127 ------------SVAFALTEPGFGTG-ADLGSTAVREGDG-YILNGEKWLITNSDIASHF 172

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           I+ A+         V   L     +GL    L   +G +      +   +       L+G
Sbjct: 173 IVFAKTTATD----VSAFLVPRETDGLSIAALPETMGCKGTEHGRVTLDSVRVPATALVG 228

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                   +E    +  +  A  S+     +L  +I +A+ R   G  +  +  ++R +A
Sbjct: 229 VEGQGNEHLERALEISRVFIAASSLGTSERALELSIAHAKSRVTFGKPIGTRQAIQRYLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A D+ A   +    A  +D  +    EA+         K +  +    V   A+   G
Sbjct: 289 EMATDVYALRGILADAAQKWDAGERIPAEASM-------CKLFGLEAVGRVTDRALLIHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           G GY     I R YR++  N +  G+     L     L  G    +  
Sbjct: 342 GIGYTRAHPIERLYRDARLNWLEEGTPTIQYLVTAGRLLDGYAFSDAF 389


>gi|118161365|gb|ABK64048.1| putative acyl-CoA dehydrogenase pigA [Janthinobacterium lividum]
          Length = 382

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 119/355 (33%), Gaps = 24/355 (6%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++   GL        +            A    L  +      +   +  +    +    
Sbjct: 44  QASEIGLAGLPLPEEWGGSG------FGALDTMLAVEALGQGCVDMGLVFSLCAHMFACA 97

Query: 169 -RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             + +       SRE      + M K S+     +TE   G+D+ A+ S  ++  +  Y 
Sbjct: 98  VPLWRHG-----SRELHERYLSGMAKGSLIAANAITEPGSGSDVFAMRSSARRDGEH-YI 151

Query: 228 LSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L+G K F  ++P++D F++ A+ +     F +   L     +GL     + K G  ++  
Sbjct: 152 LNGEKCFVTNAPVADVFLLYAKTDEHQSYFGISAFLVPRGTHGLTVTTGERKSGLCTSPW 211

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             +   +    +   +GD         D  I          V  M   L + + +AR R 
Sbjct: 212 GSVHLEDCRVPVWARVGDEGAGATIFHDSMIWERGCLFAAYVGAMERVLQQCVTHARERK 271

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     +   + D  L +  +  L +R    +D+     E           +K W
Sbjct: 272 QFGRPIGHNQAVSDRLVDFKLRLETSRLLLYRAGWLYDQGLPHEEA-------IAQSKLW 324

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             + A     +A++  GG+G   E  I R   ++    I  G+       +   +
Sbjct: 325 VSECAVQCGLDAVQIFGGAGVCSETGIDRLLLDALPARIFSGTNEIQREFIARHM 379


>gi|29833084|ref|NP_827718.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29610206|dbj|BAC74253.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 391

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 137/407 (33%), Gaps = 38/407 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A    P +  +   GE        P    L R     G        
Sbjct: 20  DLAIRDTVRTWA--AQRVLPYVAEWYENGEL-------PGIRDLARELGAIGALGMSLTG 70

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   +    +    ++W P++ S  
Sbjct: 71  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYALHRFGSEEQKQEWLPRMASG- 129

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSD 241
                        V    GLTE   G+D A++ +  ++ S G + L+G K ++++  ++ 
Sbjct: 130 ------------DVIGCFGLTEPDHGSDPASMRTYAKRESGGDWVLNGRKMWITNGSVAG 177

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             ++ AQ +  +  F+VP         G     +K+K   R++ T EL   +        
Sbjct: 178 VAVVWAQSDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDDVRLPAAAV 232

Query: 302 LNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           L   TG    +  L          ++   R S   A+ YA+ R   G  +    + +  +
Sbjct: 233 LPEVTGLKGPLSCLSHARYGIVWGAMGAARASFEAAVEYAKTREQFGRPIGGFQLTQAKL 292

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+++     L+  L    D  + R E+ ++        K    + A  +   A   +
Sbjct: 293 ADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFG-------KLNNVREAIEICRTARTIL 345

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 346 GANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 391


>gi|78047085|ref|YP_363260.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78035515|emb|CAJ23161.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 391

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 124/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L    +   L  S+  R     +    + +    L         
Sbjct: 43  GDAFDAGRFPREWIPELAELGL---LGASLPPRDGGAGLGAVCYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L      G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKLWITNGSIAGLAIIWAHTDD-----GVRGFLVKTDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
                + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPRAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  IA A  L+ +L    D    + 
Sbjct: 262 AMACLREALAYAGERILFGRPLAATQSAQIKLADMARRIATAQLLALQLGRLKDAGTLQP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|85710458|ref|ZP_01041522.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           NAP1]
 gi|85687636|gb|EAQ27641.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp.
           NAP1]
          Length = 404

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 122/363 (33%), Gaps = 37/363 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            L       GL  +              ++ + A  +  +           S      + 
Sbjct: 64  ELFPLMGQAGLLGATIPEELGGAGAGYVSYGLIAREIERVDSGYRSMASVQSSLVMHPIY 123

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P + S E             +    GLTE   G+D A + +  +   D
Sbjct: 124 AYGSQEQREKYLPGLASGE-------------LIGCFGLTEPDAGSDPAGMKTYAKMDGD 170

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P +D F++ A+ E   G   +   + +    GL   +++ KI  R+
Sbjct: 171 GFVISGSKTWISNAPFADVFVVWAKSEAHDGA--IRGFILEKGMKGLSAPKIEGKISLRA 228

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  +           LL ++    GP         L+ A   +S   +  AE   +A 
Sbjct: 229 SPTGMIMMDEVKLPADALLPNVQGLKGP------FGCLNRARYGISWGAMGAAEFCMHAA 282

Query: 341 R-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           R     R   G  L    + ++ +AD+  DIA     S R+    DE +       ++  
Sbjct: 283 RQYGLDRRQFGRPLAGTQLYQKKLADMLTDIALGLQASLRVGRLMDENR-------FSPD 335

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  I K      A  +   A +  GG+G  EE  + RH       +   G+ +   L + 
Sbjct: 336 MISIVKRNNVGKALDIARTARDMHGGNGISEEYQVIRHAVNLETVNTYEGTHDVHALILG 395

Query: 456 NLL 458
             +
Sbjct: 396 RGI 398


>gi|300696615|ref|YP_003747276.1| acyl-coa dehydrogenase oxidoreductase [Ralstonia solanacearum
           CFBP2957]
 gi|299073339|emb|CBJ52850.1| putative acyl-coa dehydrogenase oxidoreductase protein (abmD)
           [Ralstonia solanacearum CFBP2957]
          Length = 405

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 136/400 (34%), Gaps = 34/400 (8%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
               + LA   +    +   +   G   D         AL+R+    G        +   
Sbjct: 13  DDRHRGLAAELDAWAAEHVPHD-HGADVD-----AECRALVRKLGQAGWLRYAVGGTAHG 66

Query: 127 VVRKQAHKIRAARL---YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
              +         +          A    +     +  ++L  TP   + +  K+   E 
Sbjct: 67  GAGETIDTRAICLIRETLARHSGLADFAFAMQGLGSGAISLQGTPAQRERYLTKVARGE- 125

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                             L+E   G+D+AA+    +   DG        W  +  ++D +
Sbjct: 126 ------------AIAAFALSEPDAGSDVAALACAARADGDGYVLDGEKTWISNGGIADFY 173

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           ++ A+     G   +   + +    G       + I         L F+         + 
Sbjct: 174 VVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPH--PLARLRFTGCRIPAAQRVG 231

Query: 304 -VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    M+ L       A  ++   R +L EA+  A  R +  G+L D  + +  +A
Sbjct: 232 AAGEGFKVAMRTLDVFRTSVAAAALGFARRALDEALARATTRRMFNGVLADFQLTQAKLA 291

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +A  I +A  L++R A   D+ +S + EAA A++ A        + A  VI  A++  G
Sbjct: 292 QMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDAAVQMWG 344

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           G G + E+ + R YRE  A  I  G+     L +   L +
Sbjct: 345 GLGVVSEQPVERLYREIRALRIYEGATEVQQLIIARDLLR 384


>gi|83815178|ref|YP_445851.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
 gi|83756572|gb|ABC44685.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
          Length = 735

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 152/413 (36%), Gaps = 43/413 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+ ++ P W  ++ R    G+   I    +  +        R   +          ++
Sbjct: 115 EIDQEQYIPEW--VIDRLFDMGVMGMIIPEEYGGLGLGVTSYNRVLEMIGRYCASTAVMV 172

Query: 153 SPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           S   +     + +  T    + + P              +          L+E   G+D 
Sbjct: 173 SAHQSIGCKAIVMFGTEEQKEKYLP--------------LVAREELSAFCLSEPNVGSDA 218

Query: 212 AAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQ------VEGRVGCFLVPRLLED 264
           AA  S   K  DG Y L+G  KW  S  MS    ++ +        G +    V  L+  
Sbjct: 219 AAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELEQQGVNALIVT 278

Query: 265 GSPNGLCY-QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
              +G+   ++ + K G R        F++        L+     ++    L  L+    
Sbjct: 279 PDMDGVEVFEKNRAKTGIRGTWQARFRFNDVRVPEENVLHEEGAGLK--VALSCLNYGRC 336

Query: 324 SV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++        + +  + I +A+ R+     L D  ++K+ IA ++    A  A+ + +  
Sbjct: 337 TLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARMSAVTYAMDAMLYMMTG 396

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+ +          +   ITK +C      VI EA++ +GG GY+ E  + R +R++ 
Sbjct: 397 LLDQGEDDI------MVETAITKVFCSDFGWNVIDEALQVMGGEGYMTEHELERAWRDNR 450

Query: 439 ANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
            + I+ GS   M   +       L EK  ++ E L    ++ +G +  +++T 
Sbjct: 451 IHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIGDNLSRILTA 503


>gi|226364825|ref|YP_002782607.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243314|dbj|BAH53662.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 420

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 122/396 (30%), Gaps = 43/396 (10%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+   P       G ER D     P            G+    +D               
Sbjct: 47  ADTIAPIASRIARGDERIDG---FP--RDAFDSLASAGVFRIPFDGDVGGDDLTHRATAT 101

Query: 137 AARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           A  +  +A        +       A       T    + W              AP+   
Sbjct: 102 AVAVEELAYYSNSVAAIFDVHCILAGNAVNQGTGAQRQRWL-------------APVVAG 148

Query: 195 SVAIGLGLTEKRGGTD--IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
            +      +E    +D   AA+T++    + G       +W  +S ++   ++LA+   R
Sbjct: 149 EIVGSFATSEPGASSDLSPAAVTTEATPTATGWVLHGRKRWITNSAVASFVVVLARTGNR 208

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +  F+VP         G+       K+GN+   T ++           LLG+        
Sbjct: 209 LSTFIVPT-----DTPGVTIGTPDRKLGNKGQITADVILDQVHLDADSLLGEEGGGLKIA 263

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   +  A   V   + +      +  RRH  GG L  +   +  +AD A  I +A
Sbjct: 264 LQTLTYGRIGIAAAGVGMAQAAFDHTAQHLARRHAFGGPLASKQHWQFLMADRATAIESA 323

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--- 426
             L  + A   D   +  E        A + K    +++  +  +A++  GG G+ +   
Sbjct: 324 RDLYLKAALRLDSGIAFPE------PEAAMAKLRGTEISVDMARDAVQAFGGLGFTQSLG 377

Query: 427 ----ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  +   YR+S    I  G+       +   +
Sbjct: 378 ADDIDGPVEAFYRDSKIGEIYEGANEVQKWVLARQI 413


>gi|257792607|ref|YP_003183213.1| putative acyl-CoA dehydrogenase [Eggerthella lenta DSM 2243]
 gi|317488895|ref|ZP_07947425.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257476504|gb|ACV56824.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316911969|gb|EFV33548.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 391

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 24/294 (8%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E      A +        LG TE   G+D +++ S  Q+  DG   L+G K F+++ ++ 
Sbjct: 103 EQQEQCFAEVMAGKPGFVLGFTEPGAGSDSSSLASTYQRR-DGKVYLNGSKSFMTNAVNS 161

Query: 242 AFIMLAQVEG-----------RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVEL 289
            +++    +            R   + VP   ++G+   G+  + L+ KIG     T EL
Sbjct: 162 KYMLCVARDADDDPEDRANRSRFSMWWVPLHDDEGNLAQGISIEPLE-KIGWNMGNTCEL 220

Query: 290 EFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
              +        + V   G ++ M       L +   S+   + +  +A+ YA +R   G
Sbjct: 221 HMQDVELEEKDLVGVEGNGFMQAMVNFEVERLIACAQSLGAAQCAFEDAVRYATQRIQFG 280

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    +++  I D+ L I       ++ A   D  +S   ++A       + K +C +
Sbjct: 281 KPIGKNQLIQEHITDMYLKIENMRNWVYKTAWKIDNGESVQIDSA-------VAKLYCGR 333

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V   A++ +GG GY ++  I+R +R+     I  G+   M+      ++K
Sbjct: 334 AAFEVCDTALQVMGGIGYTKDCRISRLWRDQRVYRIGAGTDEIMIHIAGRAIQK 387


>gi|269124806|ref|YP_003298176.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309764|gb|ACY96138.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 384

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 116/372 (31%), Gaps = 28/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W +    PA   L       GL            +   A+ +    L        
Sbjct: 31  PHVADWFEAGTFPA-RELAPELGKLGLLGMHLKGYGCAGMSAVAYGVACRELEAGDSGLR 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +      + + +    +    + W PK+ + E                  GLTE   G
Sbjct: 90  SFVSVQGSLAMAAIHKYGSQEQKQQWLPKMAAGE-------------AIGCFGLTEPDRG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D   + +  ++            W  +  ++D  ++ A+ +  +  FLVP         
Sbjct: 137 SDPGDMRTHARRDGADWVLNGTKMWITNGSVADVAVVWARTDEGIRGFLVPA-----GTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVS 326
           G   + +  K+  R++ T EL   +        L   TG    +  L          +V 
Sbjct: 192 GFTARDIHRKLSLRASVTSELVLEDVRLPADAVLPGVTGLKGPLSCLSEARYGIVWGAVG 251

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R     A+ YA+ R   G  +    + +  +A + + +  A   +  L    DE    
Sbjct: 252 AGRACYEAAVAYAKTREQFGRPIGAFQLTQEKLAWMEIALGQAGLTALHLGRLKDEGSLT 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            ++ ++ ++          + A  V  +A   +G +G   E  + RH     +     G+
Sbjct: 312 PQQVSFGKMA-------NVRAALDVARQARTILGANGITLEYPVIRHMNNLESVLTYEGT 364

Query: 447 GNAMVLDVLNLL 458
                L +   +
Sbjct: 365 QEVHTLVLGQAI 376


>gi|126731614|ref|ZP_01747419.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
 gi|126707780|gb|EBA06841.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37]
          Length = 384

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 120/388 (30%), Gaps = 37/388 (9%)

Query: 79  YNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +     +            D  +   A   L+      G             VR     
Sbjct: 15  RHRDLAASLDAWATDHLSAVDHSDTDAACRQLVTMLGEAGFASHSGAEDGTLDVRT---L 71

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                        A    +        ++L  +P    DW P               +  
Sbjct: 72  CLIRETLARHDGLADFAFAMQGLGTGAISLFGSPEQKADWLPL-------------TRAG 118

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
                  LTE   G+D+AA T       +         W  +  ++D + + A+     G
Sbjct: 119 KAISAFALTEPGSGSDVAANTMSATLDGNHYVLNGQKTWISNGGIADVYTVFARTGEAPG 178

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
              +   +      GL        I     AT  L F++        +     P +  +I
Sbjct: 179 AKGMSAFIVPADTPGLEITERLQTIAPHPLAT--LTFNDLRVPATAMIG---EPGQGFRI 233

Query: 315 LI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            +          A  ++   R +L EA+     R + G  L D  +++  IAD+ALD+ A
Sbjct: 234 AMSVLDVFRSTVAAAALGFARRALDEALARVTTRQIQGAPLFDLQMVQGHIADMALDVDA 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L +R A + D    R          A + K +    A  +I +A++  GG G     
Sbjct: 294 AALLVYRAAWTKDSGAPR------VTREAAMAKLFATDQAQHIIDKAVQLHGGDGVKSHE 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
           ++ + YRE  A  I  G+ +   + +  
Sbjct: 348 TVEKLYREIRALRIYEGASDVQRVIIAR 375


>gi|259416027|ref|ZP_05739947.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
 gi|259347466|gb|EEW59243.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B]
          Length = 385

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 127/396 (32%), Gaps = 39/396 (9%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
               ++ A                G   D  +   A   L+      G+     +     
Sbjct: 13  DQEHRDWAAQVEAV--------ASGLVIDHSDTDAACRKLVADLGAAGVLRPTGEGE-GG 63

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                     A  +       A    +        ++L  T      W PK  S      
Sbjct: 64  ERLDVRRLCLAREILARHDGLADFAFAMQGLGTGAISLFGTDAQKAAWLPKTRSG----- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                   +      LTE + G+D+A  T    +  D         W  +  ++D + + 
Sbjct: 119 --------AAIAAFALTEPQSGSDVANSTMTAVRDGDDYVLNGEKTWISNGGIADVYTLF 170

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+     G   +   +     +G         I     AT  L F++        +    
Sbjct: 171 ARTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLAT--LRFTDVRIPASAMIG--- 225

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            P +  +I +          A  ++   R +L EA+     RHV G  L D  +++  IA
Sbjct: 226 APGQGFRIAMSVLDVFRSTVAAAALGFGRRALDEALRRVTDRHVQGAPLFDLQMVQGHIA 285

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D+ALD+ AA  L +R A + D        AA     A + K +  + A  VI +A++  G
Sbjct: 286 DMALDVDAAALLVYRAAWTKDSG------AARVTREAAMAKLFSTEAAQVVIDKAVQLFG 339

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G G      + + YRE  A  I  G+ +   + +  
Sbjct: 340 GEGVRSGAMVEKLYREIRALRIYEGASDVQRVVIAR 375


>gi|89053818|ref|YP_509269.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88863367|gb|ABD54244.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 383

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 121/399 (30%), Gaps = 28/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGG----ERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   +          +     A            D  +   A  AL+      G      
Sbjct: 1   MADKSFLSWPFFEERHRDLAGALDAWATAELAGIDHSDTDAACRALVAALGQGGWLNHAA 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                                      A    +        ++L  T     +W PK+  
Sbjct: 61  VNPKGEAKLDVRTLCLIRETLARHDGLADFAFAMQGLGTGAISLFGTDAQKVEWLPKV-- 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                      +  +      LTE + G+D+A  T       D         W  +  ++
Sbjct: 119 -----------RAGTAISAFALTEPQSGSDVANSTMTATLDGDVYVLDGEKTWISNGGIA 167

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      GL        I     +T  L FS        
Sbjct: 168 DVYTVFARTGDAPGARGLSAFVVPADAPGLEVTERLETIAPHPLST--LRFSGCRVPASA 225

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M +L       A  ++   R +L EA+     RHV G  L D  +++ 
Sbjct: 226 RLGESGAGFKIAMSVLDVFRSTVAAAALGFARRALDEAMARVTTRHVQGAPLFDLQMVQG 285

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+A+DI A+  L +R A + D    R          A + K +    A  VI  A++
Sbjct: 286 HIADMAVDIDASALLIYRAAWAKDSGAPR------VTREAAMAKLFSTDQAQKVIDRAVQ 339

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G     ++ + YRE  A  I  G+ +   + +  
Sbjct: 340 LHGGDGVRSGETVEKLYREIRALRIYEGASDVQRVIIAR 378


>gi|239940217|ref|ZP_04692154.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239986706|ref|ZP_04707370.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291443648|ref|ZP_06583038.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291346595|gb|EFE73499.1| acyl CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 406

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 113/369 (30%), Gaps = 25/369 (6%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R     G      D           + +    L          +      +  
Sbjct: 60  PGIRELARELGALGALGMSLDGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMY 119

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + W P + + E             +    GLTE   G+D A + +  ++
Sbjct: 120 AIHRFGSEEQKQRWLPGMAAGE-------------IIGCFGLTEPDHGSDPAGMRTYAKR 166

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             +         W  +  ++   ++ AQ +       +   +      G     + +K  
Sbjct: 167 DGEDWILTGRKMWITNGSVAGVAVVWAQTDEGEDGRGIRGFVVPTDAPGFSAPEIHHKWS 226

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R++ T EL           +L D     GP+  +           S+   R S   A+ 
Sbjct: 227 LRASVTSELVMDEVRLPADAVLPDAKGLRGPLSCLS-HARYGIVWGSMGAARASFESALD 285

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YAR R   G  +    + +  +AD+AL++     L+  L    D    R E+ ++     
Sbjct: 286 YARSREQFGRPIGGFQLTQAKLADMALELHKGILLAHHLGRRMDAGGLRPEQVSFG---- 341

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K    + A  +   +   +G +G   E  + RH     +     G+   M   VL  
Sbjct: 342 ---KLNNVREAIEICRTSRTILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGK 397

Query: 458 LEKGTNLFE 466
              G + F 
Sbjct: 398 ALTGLDAFR 406


>gi|218288739|ref|ZP_03493002.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241097|gb|EED08273.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 386

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 134/384 (34%), Gaps = 30/384 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              E  +     P   AL R     G       R            +   R +       
Sbjct: 22  AWSEHIEATGTVPD--ALWRELRDAGYLRLAAPRHLGGHGLSFTDYLDLLRRFAHTHGSI 79

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  + +    +A   TP   + +               P     + +   LTE   G
Sbjct: 80  RVMVHVANSLWRSLAQKATPEQVERFVK-------------PFVAGDIRVTFTLTEPNSG 126

Query: 209 TDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  A I +  ++  D  Y L+G KW  + S ++D F++  ++EG  G      LL     
Sbjct: 127 SG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLFCRLEGTSGGEGTLALLVPRDA 184

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE----DMKILIYLDSAIM 323
            GL  + +   +G    A   L   +    +   L      +E               + 
Sbjct: 185 PGLTIELMAPAMGIAGTAHGHLRLRDCRVPVANRLGEEGDGLEVAFRGFLDPSRTAIGMT 244

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V     +L  A ++A RR   G  L  + +++  +A++A DI AA  L    A  FDE 
Sbjct: 245 CVGAAERALELAANHALRRVTFGQPLAKRQIIQMWLAEMATDIEAARQLVLHAARRFDEG 304

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EAA A++       +  +M   V  +A++  GG GY +   I R YR++      
Sbjct: 305 HPITVEAAMAKM-------FATEMLQRVTDKALQIHGGPGYFKSSEIERIYRDARMQRFE 357

Query: 444 LGSGNAMVLDVLN-LLEKGTNLFE 466
            G+     + +   ++EK     E
Sbjct: 358 EGTSEIQKMVIARDVIEKAKRASE 381


>gi|309813074|ref|ZP_07706800.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
 gi|308432958|gb|EFP56864.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp.
           Ellin185]
          Length = 393

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 114/330 (34%), Gaps = 29/330 (8%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ +    L          +      +   +    +     +W P+             M
Sbjct: 83  AYGMACHELEAADSGIRSLVSVQGSLAMFAIWRWGSEEQKTEWLPR-------------M 129

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GLTE   G+D A + +  ++            W  +  ++D  ++ AQ + 
Sbjct: 130 AAGDAVGCFGLTEPDFGSDPAGMRTHAKRDGGDWVLNGTKMWITNGAIADIAVVWAQTDD 189

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308
           ++  F+VP         G   + +  K+  R++ T EL  ++       +  ++    GP
Sbjct: 190 KIRGFVVPT-----DTPGFEAREITKKMSLRASVTAELSLTDVRLPADAVFPEVRGLKGP 244

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +  +           ++   R SL  A+ YA  R V G  L    + +  +AD+ L+++ 
Sbjct: 245 LSCLS-EARFGIVFGAMGAARDSLETALDYAASRQVFGKPLSGYQLTQGKLADMTLEVSK 303

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              L+  L    D A    E+         + K   C+ A A+  E    +G +G   E 
Sbjct: 304 GMLLALHLGRLKDGAGVSPEQ-------ISLGKLNNCREAIAIARECRTILGANGISTEY 356

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
           S  RH     +     G+     L + N L
Sbjct: 357 SPIRHAGNLESVMTYEGTSEVHQLVLGNAL 386


>gi|258512363|ref|YP_003185797.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479089|gb|ACV59408.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 131/394 (33%), Gaps = 31/394 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
            T  E  +  +             E  +     P   AL R     G             
Sbjct: 3   RTLDEWKKDVDAYVA--GPARAWSEHIEATGTVPD--ALWRELRDAGYLRLAAPPHLGGH 58

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +   R +         ++  + +    +A   TP   + +             
Sbjct: 59  GLSFTDYLDLLRRFAHTHGSIRVMVHVANSLWRSLAQKATPEQVERFVK----------- 107

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIML 246
             P     + +   LTE   G+  A I +  ++  D  Y L+G KW  + S ++D F++ 
Sbjct: 108 --PFVAGDIRVTFTLTEPNSGSG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLF 163

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            ++EG  G      LL      GL  + +   +G    A   L   +    +   L    
Sbjct: 164 CRLEGTSGGEGTLALLVPRDAPGLTVELMAPAMGIAGTAHGHLRLRDCRVPVANRLGEEG 223

Query: 307 GPVE----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             +E               +  V     +L  A  +A RR   G  L  + +++  +A++
Sbjct: 224 DGLEVAFRGFLDPSRTAIGMTCVGAAERALELAADHALRRVTFGQPLAKRQIIQMWLAEM 283

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A DI AA  L    A  FDE    + EAA A++       +  +M   V  +A++  GG 
Sbjct: 284 ATDIEAARQLVLHAARRFDEGHPITVEAAMAKM-------FATEMLQRVTDKALQIHGGP 336

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GY +   I R YR++       G+     + +  
Sbjct: 337 GYFKSSEIERIYRDARMQRFEEGTSEIQKMVIAR 370


>gi|54026802|ref|YP_121044.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54018310|dbj|BAD59680.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 393

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 119/377 (31%), Gaps = 24/377 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P    W +    PA   L       GL     +    P +   A+ +    L  + 
Sbjct: 31  QRLRPHVADWFEAGTFPA-RELAPALGELGLLGMHLEGYGCPGLSATAYGLACHELEAVD 89

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +      + S +    +    + W P + + E                  GLTE
Sbjct: 90  SGLRSMVSVQGSLAMSAIHKFGSEEQKQRWLPSMAAGE-------------ALGCFGLTE 136

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLE 263
              G++   + ++  +            W  +  ++D  ++ A  VEG     +V   L 
Sbjct: 137 PDFGSNPGGMRTRAVRDGSDWVLNGSKMWITNGSVADVAVVWAYAVEGGDAKPVVRGFLV 196

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSA 321
                G   + ++ K+  R++ T EL+           L  S G    +  L        
Sbjct: 197 PTDTPGFTAREMRRKLSLRASITAELDLDEVRLPADAVLPGSNGLAAPLACLSEARFGIV 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++      LA  I YAR R V    L    + +  IAD+AL+      L+  L  + D
Sbjct: 257 FGALGAAADCLAATIDYARSREVFDKPLAAYQLTQAKIADMALEYGKGMLLALHLGRAKD 316

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +  +E+           K    + A A+  E    +G +G   +  + RH     +  
Sbjct: 317 AGRITAEQ-------ISAGKLNSTRTAIAIARECRTVLGANGITLDYPVLRHANNLESVL 369

Query: 442 ILLGSGNAMVLDVLNLL 458
              G+     L +   L
Sbjct: 370 TYEGTSEVHQLVLGRAL 386


>gi|254819087|ref|ZP_05224088.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 460

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 138/390 (35%), Gaps = 39/390 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    +D+ +  P W  L   +   G +  ++ R         +  +    L+       
Sbjct: 28  PVALDYDQRQEFP-WPVLEE-AAQQGFYSPLFYRDLIGDPTGISLPMFMEELF-WGCAGI 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + S +    +P    +WAP+ F             K      L ++E  GG
Sbjct: 85  GLAIVMPALALSAIGQAASPEQMLEWAPECFGT-------PGDLK---LAALAISEPEGG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + ++ ++  D         W  +  +++  ++ A V+  +G       +  G   
Sbjct: 135 SDVRNLRTRARRDGDDWIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVPGGTP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---------------VSTGPVEDMK 313
           GL   R  +K+G R++ T EL F          L                V+ G      
Sbjct: 195 GLKLLRKLDKLGCRASHTAELLFEGVRVPRANLLGGEEKLEHKLAKAREVVAGGKRSGSA 254

Query: 314 IL-----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            L          A  ++   R +L  A  YA  R   G  +ID   +   +A++A  I A
Sbjct: 255 TLGTFEQTRPMVAAQAIGIARAALEYATAYATEREAFGAPIIDNQGIAFPLAELATQIDA 314

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L++R +                     ++K    ++A      A++ +GG GYI + 
Sbjct: 315 ARLLTWRASWMAANNVPFER------GEGSMSKMAASEVAVKATERAIQTMGGWGYITDH 368

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + + YR++   +I  G+     + + N L
Sbjct: 369 PVEKWYRDAKLYTIFEGTSEIQRMVISNAL 398


>gi|21230885|ref|NP_636802.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769116|ref|YP_243878.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992264|ref|YP_001904274.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112494|gb|AAM40726.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574448|gb|AAY49858.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734024|emb|CAP52230.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv.
           campestris]
          Length = 387

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 126/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           GE +D   F      L+      GL  +    S         A+ +    L         
Sbjct: 39  GEAFDAARFP---RELVPELASLGLLGASLPVSEGGAGLGAVAYGLICQELERGDSGLRS 95

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 96  FVSVQSSLCMYPIHAYGSDAQRRQWLPE-------------MAAGRVIGCFGLSEAQGGS 142

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++D  I+ A  +       V   L D    G
Sbjct: 143 DPAAMTTRAVRDGDGWRLRGAKMWITNGSIADLAIIWAHTDD-----GVRGFLVDTRSEG 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              Q + +K+  R++ T  +   + F      L  + G    +  L       A  ++  
Sbjct: 198 FRAQDIGHKMSLRASVTSAVFLDDVFVPEQQRLPDALGLKAPLGCLSQARFGIAWGAIGA 257

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ Y+  R + G  L      +  +AD+A  IA A  L+ +L    +    R 
Sbjct: 258 AVACLREALAYSGERILFGRPLAATQSAQIKLADMARRIATAQLLALQLGRLKEAGTLRP 317

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 318 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 370

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 371 TVHQLVVGRAL 381


>gi|46138551|ref|XP_390966.1| hypothetical protein FG10790.1 [Gibberella zeae PH-1]
          Length = 562

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 85/456 (18%), Positives = 154/456 (33%), Gaps = 54/456 (11%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89
            F     ++  +   +  + + +  H  L            +E     N   P +  +  
Sbjct: 119 PFGDQIPFADPAWYQSYHSPYFNESHAALR--------AEIREWIE--NDIEPHVTDWDE 168

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEA 148
             E  +++     +  + RR    GL    +   + P    K     +    + M   + 
Sbjct: 169 AKEVPEEI-----YKEMGRRGYLAGLLGVKYPTQYAPEGGVKSVPAEKWDLFHEMIITDE 223

Query: 149 GHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                      +++       P + K +  K       P     +      I L +TE  
Sbjct: 224 LSRTGSGGFVWNIIGGFGIGCPPLMK-FGKKALKDRIMPG----ILSGEKRICLAITEPD 278

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+A +T + +   DG  Y ++G K ++++ +   +  +A   G  G   V  LL + 
Sbjct: 279 AGSDVANLTCEAKLSDDGKHYIVNGEKKWITNGIWSDYFTVAVRTGEAGMNGVSLLLIER 338

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM---------- 312
           S  G+  +R+  + G  S+ T  + F +       LLG  N                   
Sbjct: 339 S-EGVSTRRMPCQ-GVLSSGTTYITFEDVKVPVENLLGKENQGFKGKFCYIRMSQDQANM 396

Query: 313 --KILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              I+   +   M +        RV   E++ Y  +R   G  LID PV++  +A +A  
Sbjct: 397 LSVIMTNFNHERMGIIIQSLRFSRVCYEESVKYGSKRRTFGKKLIDHPVIRMKLAHMARQ 456

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECIGGSG 423
           I A+      L N   + +   E  A  R+  PI                EA +  GG  
Sbjct: 457 IEASYNW---LENLIYQCERMGETEAMLRLGGPIAGLKAQSTLTFEFCAREASQIFGGLS 513

Query: 424 YIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           Y        + R YR+  A +I  GS   M+   + 
Sbjct: 514 YSRGGQGAKVERLYRDVRAYAIPGGSEEIMLDLSMR 549


>gi|227828788|ref|YP_002830568.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227460584|gb|ACP39270.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|323475829|gb|ADX86435.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
 gi|323478598|gb|ADX83836.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 398

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELKKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +  L+ +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMLVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|256397560|ref|YP_003119124.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256363786|gb|ACU77283.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 391

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 102/306 (33%), Gaps = 27/306 (8%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +   +    +    + W P++ + E                  GLTE   G++ A +
Sbjct: 104 GSLAMFAIWRYGSEEQKQTWLPRMAAGE-------------AIGCFGLTEPDFGSNPAGM 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  ++  +G        W  +  ++D  ++ A  E  +  F+VP         G     
Sbjct: 151 RTTAKREGEGWILNGTKMWITNGSIADVAVVWAGTEDGIRGFVVPT-----GTPGFSAPE 205

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
           +K K+  R++ T EL   +        L  + G    +  L          ++   R  L
Sbjct: 206 IKKKLSLRASVTSELVLQDVRLPADAILPAAAGLSGPLGCLDEARFGIVFGALGAARDCL 265

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             AI YA  R V    L    + ++ +AD+AL++     L+  L    D         A 
Sbjct: 266 EAAIAYALDREVFDRPLAGFQLTQQKLADMALELGKGMLLALHLGRLKDAG-------AL 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    + A A+  E    +  +G   E  + RH     +     G+     L
Sbjct: 319 DPRQVSLGKLNNVREALAIARECRTILAANGITLEYPVLRHANNLESVLTYEGTSEIHSL 378

Query: 453 DVLNLL 458
            +   L
Sbjct: 379 VIGRAL 384


>gi|260831616|ref|XP_002610754.1| hypothetical protein BRAFLDRAFT_126305 [Branchiostoma floridae]
 gi|229296123|gb|EEN66764.1| hypothetical protein BRAFLDRAFT_126305 [Branchiostoma floridae]
          Length = 522

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 118/370 (31%), Gaps = 76/370 (20%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL           +        R   +  +    A  L +        + +         
Sbjct: 213 GLFGMQVPLECGGLGLSNTEYARLGEITAIDGAIAVTLAAHQAIGLKGILIAGNDEQKTK 272

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGH 231
           + PK+ + E+                  LTE   G+D A+I ++     DG       G 
Sbjct: 273 YLPKLATGEH-------------VAAFALTEPSSGSDAASIQTRATLSDDGKHFLLNGGK 319

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            W  +  ++D F + A+ E            V   + + S  G+   + ++K+G R + T
Sbjct: 320 IWISNGGIADVFTVFAKTEVVDSASGKVKDKVTAFIVERSFGGITSGKPEDKLGIRGSNT 379

Query: 287 VELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYAR 340
             + F +T   +   L  V  G    M I   L+    S+           + +   +A 
Sbjct: 380 CTVHFEDTPVPVENVLGEVGGGFKVAMNI---LNGGRFSMGSSGAGIVKKLIEQTAEHAT 436

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R      L++ P+++                                            
Sbjct: 437 SRVQFNKKLMEFPLIQ-------------------------------------------- 452

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +  +   + ++EA++ +GG GY++E    R+ R++    I  G+   + + +  +  K
Sbjct: 453 -VYSSESVWSSVSEALQVLGGLGYMKEYPYERYLRDARILMIFEGTNEILRMYIALVGMK 511

Query: 461 --GTNLFEQL 468
             G  L E+L
Sbjct: 512 FAGDILKEKL 521


>gi|218781229|ref|YP_002432547.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762613|gb|ACL05079.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 133/380 (35%), Gaps = 33/380 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQ 145
           +       D+++  P  H ++ +    GL        +           I    L     
Sbjct: 25  HDARVAEMDRLDEFP--HDIMLKMAQHGLTAVNVPIQYGGEGGGDLEVMILCEELSRQCP 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             +  L +  +   +++ +  +    + + P             P+ K  +    GLTE 
Sbjct: 83  ALSWTLGNVILYGNNIIGVNGSEVQRERFLP-------------PLAKGELYFSFGLTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D A I +  ++  +G + +SG K F++      +++            +   L D 
Sbjct: 130 NAGSDAANIDTHAERDGNGPWMVSGGKTFITGGTVANYVVTFARTASSRYKGITAFLVDT 189

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG------DLNVSTGPVEDMKILIYLD 319
              G  Y ++  K+G R + T  L +                LN   G +  +     L 
Sbjct: 190 QDKGFSYSKIA-KLGFRGSDTATLFYDQVPVPEDMILGGPEGLNQGWGQMVRLLNGERLS 248

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILI-DQPVMKRAIADIALDIAAATALSFRLAN 378
            A  S+   + +   A+++   R +    +   +  ++  +A++A  + AA AL++R A 
Sbjct: 249 LAACSLGIAQSAFDAALNHV--RQLPPPTIAGSRQRVEHRLAEMAAQLEAARALAYRTAW 306

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                     E         ++K++C + A  + AEAM  +G  G     +  R  R+  
Sbjct: 307 MHTNKMECVRE-------TSMSKFFCTETAKQIAAEAMTIMGPDGCDMALAAQRRLRDVL 359

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             SI  G+       V   L
Sbjct: 360 ILSIGGGTSQIQKNIVAKTL 379


>gi|329891079|ref|ZP_08269422.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
 gi|328846380|gb|EGF95944.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568]
          Length = 396

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 133/361 (36%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A++      G   ++    +        A+ + A  +  +       +   S  +   +
Sbjct: 58  RAIMTEMGEMGFLGAMLPEQYGGSEASHVAYGLIAREVEAIDSGYRSAMSVQSSLAMYPI 117

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + PK+ + E             +    GLTE  GG+D A++ +    + 
Sbjct: 118 YAFGSDEQKAKFLPKMAAGE-------------LVGCFGLTEADGGSDPASMKTTAVAVD 164

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G     G  W  +SP++D  I+ A+++G +  F+V R       +G    ++ +K+  R
Sbjct: 165 GGYRLNGGKYWITNSPIADLAIVWAKLDGVIRGFIVER-----DFDGFTTGKIGDKLSLR 219

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T ++  ++ F     + N+  G          L+ A   ++   +  AE        
Sbjct: 220 ASVTGDIGLNDVFVP---EANILPGVQGLRGPFSCLNKARFGIAWGAMGAAEFCFHASRD 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R + G  L  + ++++ +AD+  +I      ++ L    D         A+     
Sbjct: 277 YVAERTLFGRPLSSRQLVQKKLADMQTEIFLGFEGAYALGRLLDTG-------AWVPEAI 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A AV  EA +  GG+G   E  + RH       +   G+ +   L +   
Sbjct: 330 SLMKRNNCGKALAVAREARDMHGGAGITGELHVMRHAMNLETVNTYEGAHDVHALILGRA 389

Query: 458 L 458
           +
Sbjct: 390 I 390


>gi|182439543|ref|YP_001827262.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468059|dbj|BAG22579.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 414

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 125/407 (30%), Gaps = 34/407 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  +  T +  A  A+   P +  +   GE        P    L R     G      D 
Sbjct: 39  DLAIRDTVRTWA--ADRVLPHIAEWYEKGEL-------PGIRGLARELGALGALGMSLDG 89

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                     + +    L          +      +   +    +      W P + S E
Sbjct: 90  YGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKLRWLPAMASGE 149

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                        +    GLTE   G+D A + +  ++  +         W  +  ++  
Sbjct: 150 -------------IIGCFGLTEPDHGSDPAGMRTYAKRDGEDWILTGRKMWITNGSVAGV 196

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299
            ++ AQ +       +   +      G     + +K   R++ T EL           +L
Sbjct: 197 AVVWAQTDEGADGRGIRGFVVPTDTPGFSAPEIHHKWSLRASVTSELVMDEVRLPADAVL 256

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
            D +   GP+  +           S+   R S   A+ YAR R   G  +    + +  +
Sbjct: 257 PDASGLRGPLSCLS-HARYGIVWGSMGAARASFESALDYARGREQFGRPIGGFQLTQAKL 315

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+++     L+  L    D    R E+ ++        K    + A  +   +   +
Sbjct: 316 ADMAVELHKGILLAHHLGRRMDAGGLRPEQVSFG-------KLNNVREAIEICRTSRTIL 368

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 369 GANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 414


>gi|325832743|ref|ZP_08165506.1| putative butyryl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|325485882|gb|EGC88343.1| putative butyryl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 391

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 24/294 (8%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E      A +        LG TE   G+D +++ S  Q+  DG   L+G K F+++ ++ 
Sbjct: 103 EQQEQCFAEVMVGKPGFVLGFTEPGAGSDSSSLASTYQRR-DGKVYLNGSKSFMTNAVNS 161

Query: 242 AFIMLAQVEG-----------RVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVEL 289
            +++    +            R   + VP   ++G+   G+  + L+ KIG     T EL
Sbjct: 162 KYMLCVARDADDDPEDRANRSRFSMWWVPLHDDEGNLAQGISIEPLE-KIGWNMGNTCEL 220

Query: 290 EFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
              +        + V   G ++ M       L +   S+   + +  +A+ YA +R   G
Sbjct: 221 HMQDVELEEKDLVGVEGNGFMQAMVNFEVERLIACAQSLGAAQCAFEDAVRYATQRIQFG 280

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    +++  I D+ L I       ++ A   D  +S   ++A       + K +C +
Sbjct: 281 KPIGKNQLIQEHITDMYLKIENMRNWVYKTAWKIDNGESVQIDSA-------VAKLYCGR 333

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            A  V   A++ +GG GY ++  I+R +R+     I  G+   M+      ++K
Sbjct: 334 AAFEVCDTALQVMGGIGYTKDCRISRLWRDQRVYRIGAGTDEIMIHIAGRAIQK 387


>gi|320333820|ref|YP_004170531.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus
           maricopensis DSM 21211]
 gi|319755109|gb|ADV66866.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus
           maricopensis DSM 21211]
          Length = 599

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 93/511 (18%), Positives = 177/511 (34%), Gaps = 73/511 (14%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
             +T     +   G    +V+  P     +      G   +  D +   +         A
Sbjct: 56  RRDTDTFEPHIVNG----RVQLVPDVQKAIHAFRDAGFFSAHHDEALGGLQLPWLITQAA 111

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              +  A +        ++ +A+++    TP   + +   +    +  T           
Sbjct: 112 LACFQAANIATSAYPFLTIGNANLLRAFGTPEQQEKYLRPLLEGRWFGT----------- 160

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG- 251
             + L+E   G+ +A IT+      DG Y ++G K ++S    +       ++LA+  G 
Sbjct: 161 --MALSEPHAGSGLADITTLATPRDDGTYTVAGTKMWISGGEHELSENILHLVLARTPGA 218

Query: 252 -----RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFL 298
                 +  FLVPR         G+ N +    L +K+G R      L F    ++ G L
Sbjct: 219 PPGVKGISLFLVPRYRVTDDGRAGASNHVVLAGLNHKLGYRGTTNTLLNFGEGGDSLGEL 278

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----------- 347
           +G L      +  M     +   + +          ++ YAR R                
Sbjct: 279 VGTLGGGLNAMFHMMNEARIGVGLGATMLGVAGYQYSLAYARERTQGRAASTRDPSSPPV 338

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITK 401
            +I    ++R +      +  A AL    A   D+ ++      R+       ++ P+ K
Sbjct: 339 PIIAHADVRRMLLAQKATVEGALALGLYAARLVDDERTADTPEERATATLLLDLLTPLAK 398

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--E 459
            W        +  A++ +GG+GY  +  + + +R++  N I  G+     LD+L      
Sbjct: 399 AWPSSHVQTALDHALQILGGAGYTRDHPVEQLWRDNRLNPIHEGTNGIQGLDLLGRKVTA 458

Query: 460 KGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518
            G    + L   + QDL ++ G   + ++RD++         A       A+ + A  L 
Sbjct: 459 HGGRSLQLLAQAVTQDLAAAEGLPDVQVIRDAVRHALTTSAQA-----LQAILTQAPDL- 512

Query: 519 RAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549
             G +         RFL N  S   ML G  
Sbjct: 513 --GPD---------RFLANADSALEMLGGTV 532


>gi|296164083|ref|ZP_06846704.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295900561|gb|EFG79946.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 312

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 111/336 (33%), Gaps = 33/336 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             ++ ELE L +      A E+A  +     Q H         D+        A+  R+ 
Sbjct: 6   PWLNPELEALRDLAAKFVATEIAPHSERFAEQHH--------VDR--------AVWERAG 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +       + 
Sbjct: 50  ELGLLCMSMPVEYGGGGGTFAHEAVLLEEQARIGDSSWGAGLHSGIVAHYILHYAREDLK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E             +   + +TE   G+D+ ++ ++     D        
Sbjct: 110 RQWLPKMASGE-------------LIGAIAMTEAGTGSDLQSVKTRAVLDGDEYVITGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  +++A+ +   G   +  ++ +    G    R+ +KIG R   T EL F
Sbjct: 157 TFITNGQQADLIVVVAKTDHTQGANGISLIVVEADRPGFRRGRVLSKIGQRGQDTSELFF 216

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L      G ++ M  L    L  A+ +V+ M ++L + + Y R R   G 
Sbjct: 217 DGVRVPKTHLLGDTEGQGFIQLMTQLPQERLIVAVGAVAAMELALQQTVKYTREREAFGR 276

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +      K  +A+ A +   A            + 
Sbjct: 277 TIFGFQNTKFTLAEAATETRIARVFLDHCICLHLQG 312


>gi|148359504|ref|YP_001250711.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
 gi|148281277|gb|ABQ55365.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby]
          Length = 375

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 127/352 (36%), Gaps = 30/352 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             +G   +   + F      +         +        ++++     +  +    +   
Sbjct: 45  AQNGFLGAGIPKQFGGQQWDELTIGIMHESFAKELCSLANILTVLGMVSKSLLQFGSKAQ 104

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P+I S E                 L LTE   G+D+  + +Q     D       
Sbjct: 105 KQIWLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGS 151

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K+     ++D F++LA  +G+     +  +L +   +GL    + N +G RSN   E+ 
Sbjct: 152 KKYITLGQIADLFLVLANCQGQ-----LTAVLVEKDTSGLIITPMSNFLGLRSNMLAEIF 206

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVS 345
           F N        L  + G   +  I   LD          V   +  L  A+ Y ++R   
Sbjct: 207 FDNCRIPKTNLLG-NIGIGFNCVIQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ I ++   + AA  L F         + R ++         I KY   
Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYA------GELRQQKNPAYIAETLIAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           KMA  V   A++  G +G+ E   + R+YR++    I+ G+     + +  L
Sbjct: 320 KMAVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGTSQMHEILISKL 371


>gi|13474528|ref|NP_106097.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
 gi|14025282|dbj|BAB51883.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 382

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 118/369 (31%), Gaps = 31/369 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D  +   A   L+++   DG        +  P                     A    +
Sbjct: 33  VDHHDVDAACRELVQKLGRDGWLKPTAVDTVNPGPLDVRTLCITRETLSRHDGLADFAFA 92

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   ++L  TP   + W  +              +         L+E R G+D+A 
Sbjct: 93  MQGLGTGALSLFGTPDQ-QQWLAR-------------TRAGKAISAFALSEPRSGSDVAN 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
                 +  D         W  +  ++D +I+ A+     G   +   +  G   GL   
Sbjct: 139 TEMTATRDGDSYVLTGEKTWISNGGIADLYIVFARTGEAPGAKGLSAFIVPGDVKGLGIA 198

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSG 327
                I         L F            +   P +  +I +             ++  
Sbjct: 199 ERLEVIAPH--PLARLSFDQVRLPTSA---LIGKPGDGFRIAMSVLDVFRSTVGAAALGF 253

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L E+I     R + G  + +  +++  IAD+ALDI AA  L +R A + D      
Sbjct: 254 ARRALDESIKRVAERKLFGAPMAELQMVQGHIADMALDIDAAALLVYRAAWTKDMG---- 309

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             AA     A + K +    A  VI +A++  GG G  +   +   YRE  A  I  G+ 
Sbjct: 310 --AARVTREAAMAKLFATDKAQDVIDKAVQLHGGDGVRKGHIVESLYREIRALRIYEGAS 367

Query: 448 NAMVLDVLN 456
           +   + +  
Sbjct: 368 DVQKVVIAR 376


>gi|323359839|ref|YP_004226235.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323276210|dbj|BAJ76355.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 389

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 127/365 (34%), Gaps = 29/365 (7%)

Query: 98  EFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
            +  A+    L+      GL                 + + A  L          +    
Sbjct: 38  WYDRAYFPAELIPGLADLGLFGMHLTGYGCAGRSAVEYGLAAMELEAGDSGLRTLVSVQG 97

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
             + S + L  +    + W P++   E             V    GLTE   G+D A++T
Sbjct: 98  SLAMSAIYLHGSEEQKQTWLPRMARGE-------------VIGCFGLTEPGSGSDPASMT 144

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           ++ ++  D        +W   + ++D  ++ A+ +  V  FLVP         G     +
Sbjct: 145 TRARQDGDAWVLDGAKRWIGLASIADVAVIWARTDEGVRGFLVPT-----GTPGFVATPI 199

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLA 333
             K+  R++   ++  ++    L   L ++ G       L           +   R S A
Sbjct: 200 APKMSMRASIQCDITLTDVRVPLDAVLPLARGLSAPFACLNNARYGIGWGVIGAARDSYA 259

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YA  R   G  +    + ++ + D+A++I  A  ++ RL    D  + +S +    
Sbjct: 260 TALAYAGERRQFGQPIAAFQLTQQKLVDMAIEIEKAQLVALRLGRLKDAGRLQSHQ---- 315

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                + K    + A  V+ EA   +GG+G   E S  RH     +     G+     L 
Sbjct: 316 ---ISVAKLANTRAAIDVVREARTILGGNGVTAEFSPMRHAANLESVRTYEGTDEIHTLV 372

Query: 454 VLNLL 458
           +   L
Sbjct: 373 LGAHL 377


>gi|119475726|ref|ZP_01616079.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119451929|gb|EAW33162.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 384

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 105/297 (35%), Gaps = 14/297 (4%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +P +H   A    +         P  +      + ++E   G+D A + ++  +  D   
Sbjct: 99  SPNLHMLLAT--ANDYQTQRYVEPYARGEAVSAIAISEPGAGSDPAGMITKAVRDGDEWV 156

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W      +D  I++A  E   G   +   + +    G    R    IG   + T
Sbjct: 157 LNGRKIWVSRVDEADFTILMAVTEPGKGNAGISAFIIEKDTPGFIISRHIPMIG--GHTT 214

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+   +       LLG+L     P++   ++  L      V   R ++     YA+ R+
Sbjct: 215 FEITLDDCRLPATQLLGELGKGFAPMQLRLVIRRLQMGAWCVGMARRAVDIICEYAKNRN 274

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L D+  ++  +AD  + I A   +  + A   D  +    EA+         K +
Sbjct: 275 TFGASLADRQAVQWWVADAEIKIHACRLMLQQAAWKQDRGEDVRTEASM-------VKVY 327

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++A  +I +AM+  G  G  +E  +    ++     +  G      + +     +
Sbjct: 328 GTELATDIIDQAMQTCGAMGMTKELPLNMMAQQVRTMRVYEGPSEIHRMVIARRRMR 384


>gi|84499962|ref|ZP_00998228.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84391896|gb|EAQ04164.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 386

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 130/401 (32%), Gaps = 33/401 (8%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA---WHALLRRSIHDGLHCSIWD 121
           +   +  +   + + +     A          ++ H A     +L+ R   DG       
Sbjct: 1   MADRSYLDWPFLTSPHKDHATALDDWAGTLGPIDHHDADATCRSLVARLGADGWLEPTAV 60

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
               P          +          A    +        ++L  +P    +W P     
Sbjct: 61  DPATPQPLDVRTLCLSRETLARHDGLADFAFAMQGLGTGALSLFGSPDQQAEWLPL---- 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                     +K        LTE + G+D+A  T   +   D         W  +  ++D
Sbjct: 117 ---------TRKGKAISAFALTEPQSGSDVANSTMTARDDGDAWVLDGEKTWISNGGIAD 167

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
            + + A+     G   +   +  G   GL      + I     AT  L FS         
Sbjct: 168 VYTLFARTGEGPGAKGLSAFILPGDTPGLEIAERLDTIAPHPLAT--LRFSGARLPKSAL 225

Query: 302 LNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           +     P +  +I +          A  ++   R +L EA      R V G  L D  ++
Sbjct: 226 IGQ---PGQGFRIAMSVLDVFRTTVAAAALGFARRALDEATARVMSREVQGKPLADLQMV 282

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA++AL + AA  L +R A + D        A+     A + K +    A  VI  A
Sbjct: 283 QAHIAEMALRVDAAALLVYRAAWTKDSG------ASRVSREAAMAKLFATDEAQKVIDAA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           ++  GG G     ++ R YRE  A  I  G+ +   + +  
Sbjct: 337 VQLHGGDGVRSGNTVERLYREIRALRIYEGASDVQKVIIAR 377


>gi|85705433|ref|ZP_01036531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85669858|gb|EAQ24721.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 391

 Score =  202 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 12/287 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQ 248
           P           +TE   G+D   + ++   + DG + LSG KWF++S  +  FI++ A 
Sbjct: 112 PSACGERRGCFAITEADAGSDPRRVKTKAV-MRDGQWYLSGEKWFVTSYNASDFIIVHAH 170

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305
           V+           L D     + + R    + N +    EL F  T       LG++   
Sbjct: 171 VDDDPDKP--TLFLVDKPVLNMTHVRSPKFMHNFAFDHAELIFDETPVAADRQLGEIGQG 228

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +D  +   L  A  S+     +   A  +A  RH     + D   ++  +AD+A+D
Sbjct: 229 FELTKDWFVEARLQIAAHSIGAATRAAEIANEFATSRHQFDRAIRDFQGIEFMLADMAVD 288

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I AA ++ +R+A   D    R    +     A   K +C + +  VI +A++ +GG GY+
Sbjct: 289 IFAAKSMLYRVAAEIDAGADR----SRVHAHASALKLFCSEASGRVIDKAVQILGGRGYM 344

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFST 471
            E    R YR+   + I  G+       V   + K G  ++ + F T
Sbjct: 345 RENPAERLYRDIRVDRIWEGTSEIQRSVVGGRIRKHGMRIYSEAFET 391


>gi|307941770|ref|ZP_07657125.1| butyryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307775378|gb|EFO34584.1| butyryl-CoA dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 345

 Score =  202 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 104/321 (32%), Gaps = 16/321 (4%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ +   A  A L+    +G         +            A           
Sbjct: 37  PNAGALDEGKGREALLANLKTLSENGFMGLNVSADYGGTEAGTVSFALAIEALARGCAST 96

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               S S     ++  + +      + PK+    Y             A    LTE   G
Sbjct: 97  AVTASVSNMVGEVIQAVGSEDQKATYLPKLTDGTYP------------AGAFCLTESSAG 144

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +D +A+ ++  K  +         +  S   +  F++ A  +        +   L +   
Sbjct: 145 SDPSAMKTRAVKDGNHYVLNGSKLYISSGEYAGVFVVWAVTDPDAPKGKGISCFLVEAGT 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL   + + K+G   +AT E+ F +       ++G+ N              +  A ++
Sbjct: 205 PGLIISKAEKKMGQTGSATNEIVFQDCRIPATAMMGEENDGFRVAVSELAGGRIGVASLA 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++  A  Y   R   G  L D   ++  IAD   D+ AA  L  + A+  D   
Sbjct: 265 LGIARKAMDTAKAYVNERQQFGKPLADMQGIQWMIADRETDLEAARLLILQAASLKDAGH 324

Query: 385 SRSEEAAYARIMAPITKYWCC 405
             ++EA+ A++ A        
Sbjct: 325 PFAKEASMAKLFASEAAQRAT 345


>gi|126434107|ref|YP_001069798.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233907|gb|ABN97307.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 633

 Score =  202 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 78/508 (15%), Positives = 169/508 (33%), Gaps = 74/508 (14%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
              + +E++ L    L+ + +E    A+ + P              V   P +    +  
Sbjct: 38  AKFILREVDRLAREDLAASFEE----ADRHPPVYDPSTR------SVTVTPEFGGAYKTW 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           +                    +     A   L A       +     +A +V    T   
Sbjct: 88  MDAEWWRLRVLPELGGTDAPNSLNWALAEFVLGANPALWTYVGMPT-AARVVWRHGT--- 143

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                      E D        +      + LTE   G+D+ A  ++     DG + + G
Sbjct: 144 -----------ERDRKIAQIGVEKRWGATMVLTEPDAGSDVGAGRTRAVPNDDGTWNIHG 192

Query: 231 HKWFLSSPMSDA-----FIMLAQV----------EGRVGCFLVPRLLED-------GSPN 268
            K F+++   D       ++LA+              +  FLVP+   D       G  N
Sbjct: 193 VKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHFDPDTGELTGERN 252

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+    ++ K+G   + T EL   +     G+LLG+++     + ++     +     ++
Sbjct: 253 GVYANNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVIEDARMMVGCKAI 312

Query: 326 SGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALS 373
           + +      A+ YA++R                  +   P ++R++           +L 
Sbjct: 313 ATLSSGYLNALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLV 372

Query: 374 FRLANSFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYI 425
              A+  DE        +  +   A   ++ PI K +  + +  V+  E+++  GGSGY+
Sbjct: 373 LYTASWQDEIAVKTAAGEDTALAEAVNDLLLPIVKGYGSERSWVVLGTESLQTFGGSGYL 432

Query: 426 EERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK- 482
            E  I ++ R++  +++  G+       L    ++   +     L   ++    +S    
Sbjct: 433 REYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDEVKAFAAASDPAS 492

Query: 483 -VITILRDSISLCKEDKGLARFLTEKIA 509
            +    R         + +   +T  +A
Sbjct: 493 PITGERRLLGDAVSNVEAIVAKMTSDLA 520


>gi|134078234|emb|CAK96815.1| unnamed protein product [Aspergillus niger]
          Length = 672

 Score =  202 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 107/480 (22%), Positives = 179/480 (37%), Gaps = 61/480 (12%)

Query: 38  SSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE- 92
           S D +L  ++  +           +  L    L  +  + +  A  N P L      GE 
Sbjct: 63  SDDVVLGRILELYLPHNCGNAGYSIHNLSRRALEPSILQHSVDAETNPPVLRPLTTFGEE 122

Query: 93  -RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R + +     W AL      +GL    ++       R+     + A  ++ +   A   
Sbjct: 123 NRVNPLWTSNGWQALKAIGQEEGLVSVAYETENTTWNRR---VHQFALNHVWSGSAAMTG 179

Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              S+T  +A ++A                 RE      +   K +   G  +TE++GG+
Sbjct: 180 CPASMTDGAAKLLAAHLNEPDGDQPGRSEVLREAHRRLISRDPKVAWTSGQWMTERKGGS 239

Query: 210 DIAAITSQGQKISD-----------------GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           D+    +  ++++                  G + + G KWF S+  S+  +MLAQ    
Sbjct: 240 DVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFSSATDSEMTVMLAQTTKG 299

Query: 253 VGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +  F  P             D   NG+  QRLKNK+G +   T ELE     G+L+G+  
Sbjct: 300 LSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPTAELELKGVRGWLIGEEG 359

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                V  +  +  L +A  S +G    LA    Y R R V G +L D P   R +A   
Sbjct: 360 RGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQGSLLEDIPQHVRWMAGET 419

Query: 364 LDIAAATALSFR-------LANSFDEAKSRSEEAA-----------YARIMAPITKYWCC 405
           +  AAA    F        +   +D     ++ AA             R++ P  K    
Sbjct: 420 VKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQAATLLRLITPALKALSS 479

Query: 406 KMAPAVIAEAMECIGGSGYIEERS------IARHYRESPANSILLGSGNAMVLDVLNLLE 459
             +   + E ME +GG GY E         +AR +R++  N I  G+ + M  DV+ +++
Sbjct: 480 VGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPIWEGTVSVMAEDVVRVIK 539


>gi|317031932|ref|XP_001393689.2| hypothetical protein ANI_1_1336084 [Aspergillus niger CBS 513.88]
          Length = 650

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/480 (22%), Positives = 179/480 (37%), Gaps = 61/480 (12%)

Query: 38  SSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE- 92
           S D +L  ++  +           +  L    L  +  + +  A  N P L      GE 
Sbjct: 41  SDDVVLGRILELYLPHNCGNAGYSIHNLSRRALEPSILQHSVDAETNPPVLRPLTTFGEE 100

Query: 93  -RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R + +     W AL      +GL    ++       R+     + A  ++ +   A   
Sbjct: 101 NRVNPLWTSNGWQALKAIGQEEGLVSVAYETENTTWNRR---VHQFALNHVWSGSAAMTG 157

Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              S+T  +A ++A                 RE      +   K +   G  +TE++GG+
Sbjct: 158 CPASMTDGAAKLLAAHLNEPDGDQPGRSEVLREAHRRLISRDPKVAWTSGQWMTERKGGS 217

Query: 210 DIAAITSQGQKISD-----------------GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
           D+    +  ++++                  G + + G KWF S+  S+  +MLAQ    
Sbjct: 218 DVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFSSATDSEMTVMLAQTTKG 277

Query: 253 VGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           +  F  P             D   NG+  QRLKNK+G +   T ELE     G+L+G+  
Sbjct: 278 LSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPTAELELKGVRGWLIGEEG 337

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
                V  +  +  L +A  S +G    LA    Y R R V G +L D P   R +A   
Sbjct: 338 RGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQGSLLEDIPQHVRWMAGET 397

Query: 364 LDIAAATALSFR-------LANSFDEAKSRSEEAA-----------YARIMAPITKYWCC 405
           +  AAA    F        +   +D     ++ AA             R++ P  K    
Sbjct: 398 VKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQAATLLRLITPALKALSS 457

Query: 406 KMAPAVIAEAMECIGGSGYIEERS------IARHYRESPANSILLGSGNAMVLDVLNLLE 459
             +   + E ME +GG GY E         +AR +R++  N I  G+ + M  DV+ +++
Sbjct: 458 VGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPIWEGTVSVMAEDVVRVIK 517


>gi|163761231|ref|ZP_02168307.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
 gi|162281570|gb|EDQ31865.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43]
          Length = 388

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 108/312 (34%), Gaps = 24/312 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  T     +W  +              ++        L+E   
Sbjct: 89  ADFAFAMQGLGTGAISLFGTAEQKLEWLSQ-------------TREGKALSAFALSEPAS 135

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A +     +  DG        W  +  ++D + + A+     G   +   +     
Sbjct: 136 GSDVANMAMTATRDGDGYVLNGEKTWISNGGIADVYTVFARTGEAPGAKGLSVFIVPADT 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + +         L F++        +     G    M +L       A  +
Sbjct: 196 PGLEIAERLDVVAPH--PLARLRFADCRIPASAMIGAPGAGFRIAMSVLDVFRSTVAAAA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E++     R + G  + D  +++  IA++ALD+ A+  L +R A   D+  
Sbjct: 254 LGFARRALDESLARVSERELFGAPMSDLQMVQGHIAEMALDVDASALLVYRAAWLKDQGA 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R          A + K +    A  VI +A++  GG G  +   +   YRE  A  I  
Sbjct: 314 PR------VSREAAMAKLYATDHAQDVIDKAVQLHGGDGVRKGHIVESLYREIRALRIYE 367

Query: 445 GSGNAMVLDVLN 456
           G+ +   + +  
Sbjct: 368 GASDVQKVVIAR 379


>gi|240849543|ref|NP_001155567.1| glutaryl-Coenzyme A dehydrogenase-like [Acyrthosiphon pisum]
 gi|239792397|dbj|BAH72548.1| ACYPI004433 [Acyrthosiphon pisum]
          Length = 414

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 107/315 (33%), Gaps = 34/315 (10%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      +    T    + + P++ S               +     LTE   G+D
Sbjct: 120 LSVQSSLVMHAIHAYGTEEQRERYLPRLAS-------------ADLVGSFCLTEPNAGSD 166

Query: 211 IAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           I  + S+ +  SD           W  ++P++D F++ A+ +       V   + +    
Sbjct: 167 IGTMESKAKYDSDTKSYVLNGAKTWITNAPVADVFVVWARCDDGR----VRGFVVERGTA 222

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           GL    +  K+  R+++T  +   N        L   TG          L+ A   ++  
Sbjct: 223 GLSTAVIPGKMSLRASSTGSVYMDNCVVPEDSLLPGITGMGGPFG---CLNHARYGIAWG 279

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
               AE     +  Y   R   G  L    ++++  AD+  +I+       ++    ++ 
Sbjct: 280 AFGAAEECLSISRAYCLDRKQFGKPLAATQLIQKKYADMVTEISIGLLACLQVGRLKEQG 339

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            +  E       M  + K      +  +   A + +GG+G  +E  + RH       +  
Sbjct: 340 LAPPE-------MISLIKRNSTGKSLDIARWARDTLGGNGISDEYHVIRHLINLETVNTY 392

Query: 444 LGSGNAMVLDVLNLL 458
            G+ +   L +   +
Sbjct: 393 EGTHDVHGLILGRAI 407


>gi|110668312|ref|YP_658123.1| acyl-CoA dehydrogenase [Haloquadratum walsbyi DSM 16790]
 gi|109626059|emb|CAJ52509.1| acyl-CoA dehydrogenase [Haloquadratum walsbyi DSM 16790]
          Length = 384

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 120/357 (33%), Gaps = 24/357 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L   +   L        +          +        A       +  +     ++ 
Sbjct: 43  WEVLEAGMSANLVAQDIAEEYGGRGFDLPQTLAIYEELYRADASIALTLQLASFGTDIIY 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T   ++ +               P+ +     GL ++E   G+D+A +T+  +K  D
Sbjct: 103 KHGTAEQNERYV-------------RPVAENEQITGLAVSEPDSGSDLAGMTTTAEKDGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W  ++  +D   + A+  +G          +     +G   + +  K+  R
Sbjct: 150 EWIVNGEKYWVGNAVEADWLTLYAKTGDGDTRYDDYSLFILPTDASGYTVEHIPEKMAYR 209

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++    +  +        L+GD+      V +      +D A   +     ++ EA  + 
Sbjct: 210 ASKQGHITLNQCRIPDSHLIGDVGDGFEIVTEFFNHGRVDVAGHGLGLAAAAIEEASQFV 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R      + D   +K  +A++ +++ +A AL++R A    E  +    AA A+  A  
Sbjct: 270 HNREAWDQQISDFQAVKHDLAEMRMELESARALTWRAAKHVTENNNPGYWAALAKTTATE 329

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               C + A       M+  GG   ++E  I+R YR+     I  G+ N     +  
Sbjct: 330 AAVNCAESA-------MQLYGGRSVLKENKISRIYRDVRVPVIYEGANNIQRDLIYK 379


>gi|119962188|ref|YP_948732.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119949047|gb|ABM07958.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 387

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 137/403 (33%), Gaps = 36/403 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           TA ELA              P   RW +    P    L       G+     D    P  
Sbjct: 15  TADELALRDRVRDYTAQRIRPNIARWYEDAHFP--RELAPELGELGVLGMHLDGYGCPGR 72

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               + + A  L          +      + + +    +    + W P++ + E      
Sbjct: 73  TAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHKWGSEAQKEQWLPRMAAGE------ 126

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  +     LTE   G+D +++T+  ++ +DG       +W   + ++D  ++ A+
Sbjct: 127 -------LIGCFALTEPTAGSDPSSMTTFARETADGWVLEGAKRWIGLASIADVMVVWAK 179

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  +  FLVP        +G+    ++ K+  R++   +++F       LG   V  G 
Sbjct: 180 TEDGIRGFLVPA-----GTSGVTATPIEPKLSMRASIQCDVKFDGVR---LGPEAVLPGA 231

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
           +        L+ A   ++   +  A      A+ YA  R   G  L    + +  + ++ 
Sbjct: 232 MGLKGPFSCLNEARYGIAWGAMGAARDSYEAALEYAGNRLQFGRPLAGYQLTQEKLVNML 291

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           ++I   T L+  L    D    + ++         + K    + A  +  EA   +GG+G
Sbjct: 292 VEIQKGTMLALHLGRLKDAGHLQPQQ-------ISLGKLNNVREAIKIAREARTILGGNG 344

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
              + S  RH     +     G+     L +L     G   F 
Sbjct: 345 VTLDYSPLRHANNLESVRTYEGTDEVHTL-ILGQHITGIGAFR 386


>gi|295663286|ref|XP_002792196.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226279371|gb|EEH34937.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 428

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/466 (17%), Positives = 149/466 (31%), Gaps = 65/466 (13%)

Query: 2   TLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL 61
           +LR + R ++ N   + + +    N        N Y+ D L           +       
Sbjct: 12  SLRAVKRPISANLGRRYAHASAGFNWEDPLAASNLYTEDEL----------AIQDTARQY 61

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
            +  L+    E  R  NY+                         ++R     GL  +  +
Sbjct: 62  CQEQLAPRILEAYRNENYD-----------------------KKIIREMGELGLLGATIE 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 V   A  +    +  +       +   S    + +    T      + P++   
Sbjct: 99  GYGCAGVSTVASGLITKEVERIDSGYRSGMSVQSSLIMTGIYEFGTQEQKDKYLPEL--- 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLSSP 238
                      K       GLTE   G+D  ++ +  +      G Y +SG K W  +SP
Sbjct: 156 ----------AKGKKLGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSP 205

Query: 239 MSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           +SD F++ A+    G++  F++ R   D  P G      +KNK   R++ T  ++  +  
Sbjct: 206 ISDYFLVWAKLETTGKIKGFIIER---DQCPPGTFETPAIKNKTALRASITGMIQMDSCP 262

Query: 296 GFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQ 352
                                   L  A  ++  +   +  A  YA  R    G  L   
Sbjct: 263 VPEANMFPDVEGLKGPFTCLNSARLGIAFGTMGALEDCINRARSYALERKQFKGNPLAKY 322

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            ++++ +AD   D A  T  + +++   DE K+       A  M  + K   C  A A  
Sbjct: 323 QLVQKKLADATTDAAYGTLAAIQVSRLKDEGKA-------APEMISMIKRQNCDRALAGA 375

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               E  GG+   +E  I RH           G  +   L +   +
Sbjct: 376 RTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAI 421


>gi|33598448|ref|NP_886091.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33574577|emb|CAE39224.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 389

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/316 (20%), Positives = 118/316 (37%), Gaps = 24/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++LM +  + + + P             P+ +        L+E   
Sbjct: 94  ADFAFAMQGLGSGAISLMGSDALRQQYLP-------------PVARGEAIAAFALSEPEA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+  + +   DG        W  +  ++D + + A+     G   +   + D   
Sbjct: 141 GSDVAALACEARADGDGYVLNGEKTWISNGGIADFYCVFARTGEAPGARGISAFVVDAGT 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F++        L     G    M  L       A  +
Sbjct: 201 PGLEIAERIDLIAPH--PLARLRFADCRIPASRRLGEAGQGFKLAMMTLDIFRASVAAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E +  AR R + G  L D  + + A+ D+A  + A+  L++R A   D  +
Sbjct: 259 LGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDMATAVDASALLTYRAAWMRDVQE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R+         A + K    + A AVI  A++  GG+G +   ++ R YRE  A  I  
Sbjct: 319 VRT------TREAAMAKMTATESAQAVIDRALQMFGGAGVVAGATVERLYREIRALRIYE 372

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L K
Sbjct: 373 GATEVQKLIIARELLK 388


>gi|320588653|gb|EFX01121.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera
           kw1407]
          Length = 609

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 120/583 (20%), Positives = 196/583 (33%), Gaps = 91/583 (15%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQEL 73
           SD+ F    P L    N +  D     ++     A+    V  EL  LG  VL     + 
Sbjct: 6   SDTGFFQELPELR---NQFFDDVSFQRVLKLLVPADLRQQVEPELAQLGADVLEPRIFDY 62

Query: 74  ARMANYNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
              A  N P L    +   G    ++     W +L    I  G+    +   +    R  
Sbjct: 63  ITDAERNLPYLRGGGHNAFGRPMSELVTGEGWRSLQAFGIEKGIVAYNYTTDYGAHSR-- 120

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY---DPTNK 188
              ++  R +L     A      ++T  +   L        D    +  R +        
Sbjct: 121 --LLQMMRFHLWEASAASTTCPGAMTDGAARLLQRHLTAKPDRLEPVERRVFQAAFERLT 178

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---------------GIYCLSGHKW 233
           +     +   G  +TE+ GG+D++   +    +                 G + + G KW
Sbjct: 179 SLNPAGAWTSGQWMTERPGGSDVSQTETVATYVGATAGGDDDVDANGDPLGPWAIDGFKW 238

Query: 234 FLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSP--------------NGLCYQRLKN 277
           F S+  +   I+LA+     G   F  P      +               NG+  QRLK+
Sbjct: 239 FSSATDAGMAILLARTHSSKGLSAFFAPMRRRRRASSPATAMAGPNNTELNGVRIQRLKD 298

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K G R   T ELE   T  +L+G        +  M  +  +  ++  +     +L  A  
Sbjct: 299 KFGTRPVPTAELELRGTRAWLIGREGDGIREIATMLAITRVHCSVACLGLAGRALGVAKA 358

Query: 338 YARRRHVSGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           YA  RHVSGG        L   P+  R +AD+  +      L+   A             
Sbjct: 359 YALVRHVSGGPGGRSRMPLYKSPLHMRTLADLTGEYHGMMLLTMYTA------------- 405

Query: 391 AYARIMAPITKYWCCKMAPAVI-AEAMECIGGSGYIEERSIA-----RHYRESPANSILL 444
               IM  + K +CCK A  ++    ME +GG GY+           R +R+   N+I  
Sbjct: 406 ---YIMGSLHKAYCCKQAVPLLHGACMEALGGVGYLLNHETEPLNLARLFRDGCVNAIWE 462

Query: 445 GSGNAMVLDVLNLLEKGT------NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           G+ + +  D+L  L          N  + L +       ++ ++  T LR  I     D 
Sbjct: 463 GTTDVLSTDLLRTLTSSAVGPASLNALDWLVTITVSSDSNAVRQSWTDLRLRIEAASRDG 522

Query: 499 GL-------ARFLTEKIALASSAAALYRAGMNDIA-DVFLENR 533
                    AR +    A    A  L     +D A +    +R
Sbjct: 523 AARESLLADARNVLFSAADILIAGLLLVDARSDSAPEAAAMSR 565


>gi|317126299|ref|YP_004100411.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315590387|gb|ADU49684.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 389

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 111/352 (31%), Gaps = 38/352 (10%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT----SASMVALMTTPRVHKDWAP 176
           D  F  +   +A+   A    + A +E     S         A  +  +        +  
Sbjct: 56  DAGFFGIQTPEAYGGMALGAVMTALIEMELGRSFVQFRFGGDADNILYVANDEQRATYL- 114

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                        P           +TE   G+D  AI +  ++  D  + + G K F++
Sbjct: 115 ------------VPTINGERKSCFAITEPGAGSDARAIRTTARRDGDE-WVIRGEKTFIT 161

Query: 237 SPMSDAFI-MLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
                 F+ + A  +   G    V   L D         R  + +G    A+  L F + 
Sbjct: 162 GGDEADFVMVFAVTDREKGADGGVTCFLVDRERG--WQSRPIDTMGEWGPAS--LVFDDV 217

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGIL 349
                  L       E    + ++          ++      +   + +AR R      +
Sbjct: 218 RVPHSSILGEEGNGFE--LAMRWIGKGRYLLPARALGACERLVEMGMDHARTRVTFSKPI 275

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            ++  ++  IAD A++I A   L    A   D      +  + A++   I        A 
Sbjct: 276 AERQAIQWMIADSAVEIEALRWLVLSAAWQVDRGLDSRQAQSMAKLYGGI-------KAN 328

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            ++   ++  GG GY  E  I R YRE     I  G+       +   L +G
Sbjct: 329 EIVDRVLQMHGGMGYTRELPIERWYRELRLLRIYEGTDEIQRRTIARNLLRG 380


>gi|54294833|ref|YP_127248.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens]
 gi|53754665|emb|CAH16150.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens]
          Length = 375

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 135/374 (36%), Gaps = 32/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +DK +  P           +G   +   + F      +         +       
Sbjct: 25  PHAKIFDKEQNIP--RDFFYTLAQNGFLGAGIPKQFGGQQWDELTIGIMHESFAKEFCSL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++++     +  +    +    + W P+I S E                 L LTE   G
Sbjct: 83  ANILTVLGMVSKSLLQFGSKAQKQIWLPRIASGE-------------TLAALALTESNIG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +Q     D        K+     ++D F++LA  +G+     +  +L +   +
Sbjct: 130 SDLEHVETQLLDAGDEFILKGSKKYITLGQIADLFLVLANCQGQ-----LTAVLVEKDTS 184

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM----- 323
           GL    + N +G RSN   E+ F N        L  S G   +  I   LD         
Sbjct: 185 GLIITPMSNFLGLRSNMLAEIFFDNCRIPKTNLLG-SIGIGFNCIIQTALDEGRYTTAYG 243

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   +  L  A+ Y ++R      L +  ++++ IA++ + + AA  L F         
Sbjct: 244 CVGLGQACLDAALGYTQKRKQFDRRLDEHQLIQKMIAEMVVQVKAARELCFYA------G 297

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R ++         I KY   KM   V   A++  G +G+ +   + R+YR++    I+
Sbjct: 298 ELRQQKNPAYIAETLIAKYAASKMVVFVSNHALQIFGAAGFEDTYPVERYYRDAKVMEII 357

Query: 444 LGSGNAMVLDVLNL 457
            G+     + +  L
Sbjct: 358 EGTSQMHEILISKL 371


>gi|71005632|ref|XP_757482.1| hypothetical protein UM01335.1 [Ustilago maydis 521]
 gi|46096965|gb|EAK82198.1| hypothetical protein UM01335.1 [Ustilago maydis 521]
          Length = 451

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 124/362 (34%), Gaps = 32/362 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL  S  +      V   ++ + A  +  +       +   S      +    +    
Sbjct: 115 ELGLLGSTIEGYGCAGVNSVSYGLIAREVERVDSGYRSIMSVQSSLVMGPINQFGSDAQK 174

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + P++              K  +    GLTE   G+D +++ +      DG   L+G 
Sbjct: 175 EKYLPRL-------------AKGELVGCFGLTEPNHGSDPSSMETTATDTGDGHIVLNGS 221

Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K ++S+ P +  F++ A+         +   + +    GL    +KNK+  R++ T  + 
Sbjct: 222 KTWISNSPHAHVFVIWAKC---KWDNKIRGFIVEKGTKGLSAPAIKNKLQLRASVTGSIF 278

Query: 291 FSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +        LL       G   +         +  ++  +   +AEA  YA  R   G
Sbjct: 279 MQDVKVKRDESLLPHARPGLGSPFECLNSARYGISWGAMGALEACIAEARQYALDRSQFG 338

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    ++++ +AD + + A     S +L    D         A++  M  + K   C 
Sbjct: 339 RPIAAFQLIQQKLADASTEAALGLLCSLQLGRMKDSG-------AWSPEMVSLAKRNNCN 391

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            A       ++  GG+   +E    RH +     +   GS     L    +L KG    +
Sbjct: 392 KALQQSRSLLDIFGGNATSDEYHTGRHVQNLQTVNTYEGSYGIHTL----ILGKGITGLQ 447

Query: 467 QL 468
             
Sbjct: 448 AF 449


>gi|77165043|ref|YP_343568.1| Acyl-CoA dehydrogenase [Nitrosococcus oceani ATCC 19707]
 gi|254433673|ref|ZP_05047181.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Nitrosococcus
           oceani AFC27]
 gi|76883357|gb|ABA58038.1| Acyl-CoA dehydrogenase [Nitrosococcus oceani ATCC 19707]
 gi|207090006|gb|EDZ67277.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Nitrosococcus
           oceani AFC27]
          Length = 639

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/474 (18%), Positives = 174/474 (36%), Gaps = 53/474 (11%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
             L+  FP V  +E     + +      E  R  N +              D+ +  PA 
Sbjct: 47  EELLFPFPEVSLEEASRCDQLL--TELDEYLR--NEHPAI---------AIDQEQKIPA- 92

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            ++++R  + G+   I  + +        ++    +R+       A  + +        +
Sbjct: 93  -SVVKRLFNMGIMGMIVPKKYGGGGFGITSYNRVLSRIGQRCGSTAVMVSAHQSIGCGAI 151

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    K + P +                       L+E   G+D +   ++ +   
Sbjct: 152 ILFGTDAQKKRFLPAMAQDH--------------LSAFCLSEPNVGSDASGQETRCKLSE 197

Query: 223 DG-IYCLSG-HKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGL-CYQR 274
           DG  Y L+G  KW  S+ +S  F +LA+    + R G     V  L+      G+  Y R
Sbjct: 198 DGQFYILNGEKKWASSAALSGLFTVLAKQKIQDPRTGKEKDQVTALICTPDMAGIDIYSR 257

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333
            ++K G R      + F +        L+     +     L  LD    +++   V  A 
Sbjct: 258 NRSKCGIRGTWQARIRFRDVKVPRENLLHQEGKGLN--VALTCLDYGRCTLAAGMVGAAA 315

Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               +A+ +A+ R+  G  L D   ++  IA +A +  A  A+ +      D    R +E
Sbjct: 316 TAYEQAVKWAQYRYQFGRPLADFEQIQAKIASMAANCYAMEAMLYMTTGMLD----RHDE 371

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    I K +C ++   V+ +A++ +GG  Y+ E  + R +R+S  N I+ G+   
Sbjct: 372 DIMLE--TGICKVFCSEIGYRVVDDALQIMGGESYMTENEVERLWRDSRINLIVEGANEV 429

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
           M+  +     K   L E L +  +  +   G+ +       + + K+   + R 
Sbjct: 430 MLSFIFGYGSK--QLGEALLNIAKNPMKHLGQALRISAELFLGIKKQRPRITRL 481


>gi|229580469|ref|YP_002838869.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228011185|gb|ACP46947.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
          Length = 398

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELRKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +  L+ +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMLVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAEKIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|218891317|ref|YP_002440184.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|37223147|gb|AAQ90176.1| putative acyl-CoA dehydrogenase [Pseudomonas sp. M18]
 gi|187940037|gb|ACD39171.1| acyl-CoA dehydrogenase PltE [Pseudomonas aeruginosa]
 gi|218771543|emb|CAW27311.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 377

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 123/368 (33%), Gaps = 30/368 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            F P            GL      R +            A   +  +  + G + + +  
Sbjct: 31  HFSP---EQWAVCGEAGLLGLSIPRDYGGQGLGALSTAVAMHAFGHSCADMGLVFAAAAH 87

Query: 158 SA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                  +    +  + +D  PK+ S E   +N              +TE   G+D  A+
Sbjct: 88  QFACAMPIVEFASESLRRDLLPKMASGELIGSN-------------AITEPGAGSDSTAL 134

Query: 215 TSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++     DG Y L G K F  ++P++D F+  A  +   G   +   + +    G+   
Sbjct: 135 KTRALPQDDGGYILDGFKSFAGNAPVADVFVAYATTQPEYGALGITGFVVESERPGVMVS 194

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRV 330
               K+  RS    E+ F+     +   L          +  +  + A      +  M  
Sbjct: 195 EPLRKVCLRSCPAGEVTFAGCRVPVANRLGEEGQGRFVFQSSMGWERACLFAAFLGMMER 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L E + YAR R   G  +     +   IA++   + ++  L +R     D+   +    
Sbjct: 255 QLEETLAYARSRRQFGKAIGAYQAVSHRIAEMKFRLESSRLLLYRACWGMDQGDPQQLHI 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A        +K    + A A   +A+   GG G +E   I   +R+S    I  G+ +  
Sbjct: 315 AL-------SKLAISEGALASSLDAVRIFGGRGCLEGFGIEEMFRDSVGTVIFSGTSDMQ 367

Query: 451 VLDVLNLL 458
              V   L
Sbjct: 368 REIVAREL 375


>gi|327310127|ref|YP_004337024.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
 gi|326946606|gb|AEA11712.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20]
          Length = 381

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 139/379 (36%), Gaps = 30/379 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P   R D+  ++P     ++ +   G+        +          +RAA + L     
Sbjct: 24  DPIARRMDRENYYP--RETIKEAGKLGILTPTVPAEYGGGGGD----LRAAVVVLEELGR 77

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                S  V +  +        +  D      S+         +          L+E   
Sbjct: 78  VSGGFSLLVEAYGI--------LFADAVNNFASKRQKDEVLPKVAAGDKIGAFALSEPCC 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGS 266
           G+D AAI ++ ++            W  +   +D +++ A+   R      +   L   S
Sbjct: 130 GSDAAAIQTKAERRGGEWVINGHKMWITNGYYADYYLLAARTGPREARHKAITVFLLPRS 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
              +    ++  +G R   T EL+F++        +    G  +   I+  LD   +++S
Sbjct: 190 RC-VEATPIE-VMGVRGTGTAELKFNDCVVGDDDVVGEVNGGWK--IIMHTLDVGRVAIS 245

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           G+ V +A     EA+ +AR R + G  LI+    +  +A++   I  A  L++  A  +D
Sbjct: 246 GVAVGVARGAFEEALGWARSRELFGKRLIEMQNAQFELAEMLASIETAKTLAYYAAYLYD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                        +M+ + K    ++A  V   A++  GG GY ++      YR+S    
Sbjct: 306 TKSPD------FLLMSHVAKLQAARLAVDVTRRAVQMEGGFGYSKDSKAEMFYRDSKILE 359

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+   M   +  LLEK
Sbjct: 360 IGEGTNEVMKYVIYKLLEK 378


>gi|14530946|gb|AAK63186.1| probable acyl-CoA dehydrogenase [Glomus intraradices]
          Length = 520

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 129/382 (33%), Gaps = 23/382 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLH----CSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           P    WD+ +  P    L  ++   G+      + W     PV       I    +    
Sbjct: 135 PYAYEWDEAKRIP--QELFIKAGKAGILPGVCGAPW-----PVKHTDIKPIAGVSVEEYD 187

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLG 201
                 +        S   L           P I    S E            +  I L 
Sbjct: 188 NFHEFVICDELGRCGSGGVLWGLCGGLTIGLPPILKFGSEELQRRIAPGCLNGTKNICLA 247

Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A + ++ +   DG  Y ++G K ++++ +   +  +A   G  G   V  
Sbjct: 248 ITEPYAGSDVANLKTEAKLSDDGQYYIVNGEKKWITNGIFSDYFTVAVRTGGPGMGGVSL 307

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL +    G+  +++    G  ++ T  + F +       L+G  N     +        
Sbjct: 308 LLIEKDMPGVKTRQMLCS-GVWASGTTYITFEDVKVPRSNLIGKENGGFKCIMHNFNHER 366

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  AI +    RV   EA+ YA +R   G  L++  V++  +A +A  I A  A    L 
Sbjct: 367 MSLAIQANRFARVCYEEAMKYAHKRKTFGKKLVEHDVIRNKLAHMARKIEATHAWMESLI 426

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHY 434
                    +E          + K    +       EA +  GG  Y        + R Y
Sbjct: 427 YQT-TKLPANEAMTLLGGPIALLKAQSTQTFEYCAREATQIFGGLAYSRGGQAEKVERLY 485

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           RE P  +I  GS   M+   + 
Sbjct: 486 REVPPYAIPGGSEEIMLDLGIR 507


>gi|29827260|ref|NP_821894.1| glutaryl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29604358|dbj|BAC68429.1| putative glutaryl-CoA dehydrogenase [Streptomyces avermitilis
           MA-4680]
          Length = 413

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 137/417 (32%), Gaps = 41/417 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
            ++EL   GE     + +E  R      P +  Y      W + EF      L+      
Sbjct: 31  AYEELLSDGEREQLESVREFLRT--QVAPIVDDY------WARAEFP---FQLVEGFGRL 79

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVH 171
           GL    W     P  R          L L       A      +  +   +    +    
Sbjct: 80  GL--MDWADPDSPESRPSNLLAGFLALELAHVDASVATFAGVHTGLAMGTILTCGSDEQK 137

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSG 230
           + W P              M +       GLTE  GG+D+A  + +  ++  D       
Sbjct: 138 RRWLP-------------AMSRFEKIGAFGLTEPHGGSDVAGGLQTTARRDGDTWILDGA 184

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            +W  ++  +D  ++ A+    V    V   + +    G    +++NK+  R     ++ 
Sbjct: 185 KRWIGNATFADLVVIWAR---DVETRHVLGFVVEKDTPGFTATKIENKMALRIVQNADIV 241

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                      L  +    +  KIL       A  +V  M  +   A+ Y + R   G  
Sbjct: 242 LDGCRVPEANRLQNAHSFKDTAKILRQTRSGVAWQAVGVMFAAYEIALQYTKEREQFGRP 301

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    +++  +  +  +  A+  +  RLA   D    R E++A A       K +C    
Sbjct: 302 IGGFQLVQDLLVKMLGNATASCGMMTRLAQLQDAGVFRDEQSALA-------KAYCTVRM 354

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
              +  A E + G+G + +  + R   ++ A     G+     L V   +  G + F
Sbjct: 355 RENVGWARELLAGNGILLDYKVGRFVADAEAIYSYEGTREIQTLIVGRAVTGGLSAF 411


>gi|110835084|ref|YP_693943.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648195|emb|CAL17671.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 414

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 120/370 (32%), Gaps = 39/370 (10%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSA 159
           + +    +         +      A     A + +         AQ     +        
Sbjct: 61  QIAREKAIAAGNAGEEKKKKEGPSAMAGEEAAMRMIPIIELCKHAQGLVTAMGVSMGLGG 120

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + WA              P+          ++E   G+D    + +  
Sbjct: 121 GAIMSKGTTEQKERWA-------------LPLLTLEKVGAWAISEPNAGSDAFGQMKTLA 167

Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQ 273
           ++  +G Y ++G K W  + P +D  I++ +++          +V  +L D    GL   
Sbjct: 168 KRDGNGGYIINGSKTWITNGPYADTIILICKLDEEGVPADQRKIVSFIL-DSGMEGLTQS 226

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-----STGPVEDMKILIYLDSAIMSVSGM 328
           +   K+G  S+ T EL  ++        L            +   +      A M++  +
Sbjct: 227 KPFKKMGIGSSPTGELFLTDVKAGPERLLGGNEDSYGRSGAKGTFMQERAGVAAMALGMV 286

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +L  +  YA  R   G  +    +++  +A + +       + FR      E      
Sbjct: 287 ERALELSTQYASDRVQFGRAIGQNQLIQLKLAKMEVARTNLQNMIFRYIEMTAEG----- 341

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            A      A   K +  + A  V  EA++  GG GY+ E  + +  R++    I  G+  
Sbjct: 342 -AQMTLAEASAMKLYAAQAAMEVATEAVQIHGGYGYMRESRVEQLMRDAKILQIYAGTDE 400

Query: 449 AMVLDVLNLL 458
             ++ +   L
Sbjct: 401 MQIIAIARDL 410


>gi|329939781|ref|ZP_08289082.1| acyl-coa dehydrogenase RedW [Streptomyces griseoaurantiacus M045]
 gi|329301351|gb|EGG45246.1| acyl-coa dehydrogenase RedW [Streptomyces griseoaurantiacus M045]
          Length = 455

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 126/373 (33%), Gaps = 38/373 (10%)

Query: 100 HPAW-----HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           HPA+         R +   GL        +            +A +  + +       + 
Sbjct: 67  HPAFDAGDFRRRWRLAGAQGLVGGTVPVDYGGSGLDA--VTASAVMEALGRGTEDTGFAF 124

Query: 155 SVTSASMVALM-----TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           SV +    +LM      T    + W P + S E                  G+TE   G+
Sbjct: 125 SVAAHLFASLMPITEFGTEEQKRAWLPALCSGE-------------RIAAHGITEPEAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D   + ++ ++  D  Y L+G K F ++ P++D F++ A  E   G F +   L +    
Sbjct: 172 DALRLRTRAERKGD-TYVLNGAKCFTTNAPVADVFLVQAATEPGGGFFGLTAFLVEAGTP 230

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSV 325
           GL      +K+G R + T ++ F          L             +  +      + +
Sbjct: 231 GLRVGAPYDKLGLRGSPTADVHFDGCEVPASQVLGAEGAGAAVFSASMKWERVCLFAVYL 290

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             MR  L     YA  R   G  +     +   I D+ L +  A +L +R A        
Sbjct: 291 GAMRRVLDSTTRYAGEREQFGSPIGGFQAVGHRIVDMTLRLEGARSLLYRAARELARGSE 350

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A A++          + A  +  +A++  GG G +         R++  + +  G
Sbjct: 351 DEIAPALAKLA-------VSEAAVQLGLDAVQIRGGLGMVAG-EAEAFLRDALPSRVFSG 402

Query: 446 SGNAMVLDVLNLL 458
           + +    ++   L
Sbjct: 403 TNDIQRNNIARAL 415


>gi|289662987|ref|ZP_06484568.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 391

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/371 (19%), Positives = 125/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   +      GL  +          R   ++ +    L         
Sbjct: 43  GDAFDAGRFPREW---IPELAQLGLLGASLPVRDGDAGRGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKMWITNGSIAGLAIIWAHTDD-----GVRGFLVETYSPG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              Q + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|302381653|ref|YP_003817476.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192281|gb|ADK99852.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 396

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 133/361 (36%), Gaps = 34/361 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            A++      G   ++    +        A+ + A  +  +       +   S  +   +
Sbjct: 58  RAIMTEMGEMGFLGAMLPEQYGGSGVSHVAYGLIAREIEAVDSGYRSAMSVQSSLAMYPI 117

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                      + P++ + E             +    GLTE  GG+D A++ ++  K+ 
Sbjct: 118 YAFGNEEQKMRFLPRMAAGE-------------LIGCFGLTEADGGSDPASMKTKAVKVD 164

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G     G  W  +SP++D  I+ A+++  +  F+V R  E     G    ++ +K+  R
Sbjct: 165 GGYRLNGGKYWITNSPIADLAIVWAKLDDVIRGFIVERGFE-----GFTTGKIGDKLSLR 219

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----H 337
           ++ T ++  ++ F     + N+  G          L+ A   +S   +  AE        
Sbjct: 220 ASITGDIGLNDVFVP---EANLLPGVKGLRGPFSCLNKARYGISWGAMGAAEFCLHATRD 276

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y   R + G  L  + ++++ +AD+  +I      ++ L    D         A+     
Sbjct: 277 YVGERMLFGRPLSSRQLVQKKLADMQTEIFLGFEGAYALGRLLDTG-------AFVPEAI 329

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K   C  A A+  EA +  GG+G   E  + RH       +   G+ +   L +   
Sbjct: 330 SLMKRNNCGKALAIAREARDMHGGAGITGELHVMRHAMNLETVNTYEGAHDVHALILGRA 389

Query: 458 L 458
           +
Sbjct: 390 I 390


>gi|289670161|ref|ZP_06491236.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 391

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 129/371 (34%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L +  +   L  S+  R  +  +   ++ +    L         
Sbjct: 43  GDAFDAGRFPREWIPELAQLGL---LGASLPVRDGDAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKMWITNGSIAGLAIIWAHTDD-----GVRGFLVETYSPG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              Q + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|300704073|ref|YP_003745675.1| acyl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299071736|emb|CBJ43060.1| putative acyl-coA dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 622

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/511 (17%), Positives = 178/511 (34%), Gaps = 88/511 (17%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P     L      GL  +  D     +      +      +  A +        ++
Sbjct: 72  VHLIPEVKTALAAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGYFKAANVGTSAYPFLTI 131

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP   + +A              P  +      + L+E + G+ ++ I +
Sbjct: 132 GNANLLLAHGTPAQIEAFA-------------QPELEGRFYGTMCLSEPQAGSSLSDIVT 178

Query: 217 QGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +          Y L+G+K ++S+           ++LA++ G           +  F+
Sbjct: 179 RAEYEGASPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGPDGKPIPGVKGISLFI 238

Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------------NTFG 296
           VP+ L +     G  N +    L +K+G R      L F                    G
Sbjct: 239 VPKFLVNADGSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQFRPRGPDGQPCAGAIG 298

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------- 348
           +L+G+ +     +  M     +   + +          A+ YAR R   G          
Sbjct: 299 YLVGEPHKGLACMFFMMNEARIGVGMGATMLGYTGYLHALDYARNRPQ-GRPVGPSGKDA 357

Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396
                 ++D   ++R +      +  A  L+   A   DE +  ++ A  AR      I+
Sbjct: 358 ASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDPAVRARLGLLLDIL 417

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            PI K W  +      + A++  GG GY  E ++ + YR++  N I  G+     LD+L 
Sbjct: 418 TPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIHGLDLLG 477

Query: 457 --LLEKGTNLFEQLFSTLEQDLGSSGK----------KVITILRDSISLCKEDKGLARFL 504
             ++ +    F  L   ++  +G + +          + + +    ++   +    A   
Sbjct: 478 RKVVMQDGAAFAALGERVQASVGRALECGDEALPGYGRALGMAAQRLAKVTQTLWAAG-- 535

Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFL 535
             ++ LA+++  L   G   IA ++LE    
Sbjct: 536 DPRVTLANASVYLEAFGHVVIAWIWLEQALA 566


>gi|308487868|ref|XP_003106129.1| CRE-ACDH-6 protein [Caenorhabditis remanei]
 gi|308254703|gb|EFO98655.1| CRE-ACDH-6 protein [Caenorhabditis remanei]
          Length = 433

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/381 (17%), Positives = 141/381 (37%), Gaps = 25/381 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W+K   +PA H + +     G+        F    R  +  I  A      
Sbjct: 67  EKINPNVAQWEKSGRYPA-HYIFKMMGQLGVFAVNKPEEFGGTGRDFSMSIAVAE----- 120

Query: 145 QLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             + G +   S+  + MV   M+TP + +       S         P     +   + ++
Sbjct: 121 --QIGSIDCGSIPMSVMVQTEMSTPALAQFG-----SDFLRNRFLRPSLNGDLVSSIAVS 173

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           E   G+D++AI +  ++    +       W  +   +D   +L               + 
Sbjct: 174 EPHAGSDVSAIRTHARRFGTDLIINGSKMWITNGDQADWACVLVNTSNEKNLHKNKSLVC 233

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G+      +K+G R + TV+L F +       ++G+                L 
Sbjct: 234 IPLDSPGVHRSSPLDKLGMRCSDTVQLFFEDVRVPASFIIGEEGRGFSYQMKQFNDERLV 293

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  + +  ++  + + I YAR R + G  L+DQ  ++  +A++  ++ A  +L +R   +
Sbjct: 294 TVAVGLLPLQNCINKTIEYARERSIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVMA 353

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
             + +          ++  ++K    ++A  V    ++  GG+GY+ +  I+R +R+   
Sbjct: 354 RCQDED-------VSMLTAMSKLKIGRLARKVTDSCLQIWGGAGYLNDNGISRAFRDFRI 406

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            SI  G    M+  +     K
Sbjct: 407 FSIGAGCDEVMMQIIHKTQSK 427


>gi|300784175|ref|YP_003764466.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793689|gb|ADJ44064.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 390

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 120/399 (30%), Gaps = 41/399 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
                  +   R A     + H      + ++      A   L +     GL     +  
Sbjct: 14  DAGLAEEERAIRDAVRAYAKDHLLDHVADWYETGALPAA--ELAKGFGSLGLLGMHLEGY 71

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   A+ I    L  +       +      +   +    +    ++W P++ + E 
Sbjct: 72  GCAGTSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRWGSEEQRQEWLPRMATGE- 130

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                            GLTE   G+D  ++ ++  +            W  +  ++D  
Sbjct: 131 ------------ALGCFGLTEPDAGSDPGSMRTRAVRDGSDWVLSGTKMWITNGTVADVA 178

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           ++ AQ +  +  F+VP      S  G     +K+K+  R++ T EL              
Sbjct: 179 VVWAQTDDGIRGFVVPT-----STPGFTANEVKHKLSLRASLTAELVLDGVRLPSSAAFP 233

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
           ++    GP      L  L+ A   +        R     A+ Y   R   G  L    + 
Sbjct: 234 EVRGLRGP------LSCLNEARYGILFGVVGAARACYEAALEYTLSRSQFGKPLAGFQLT 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +R +AD+ +++  A  ++ ++    D         A         K    + A      A
Sbjct: 288 QRKLADLLVEVNRAGLVALQIGRLKDAG-------ALHHNHVSFGKMANVRSALDAARTA 340

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
              +G +G   E  + RH           G+     L +
Sbjct: 341 RSMLGANGISLEYPVMRHMANLETVLTYEGTEEMHALSL 379


>gi|169628939|ref|YP_001702588.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169240906|emb|CAM61934.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 379

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 135/391 (34%), Gaps = 25/391 (6%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S    +  R       +     P  + W++ +  P  H ++      G     +D  +  
Sbjct: 4   SSEHDDFRRTIRRYIEE--KINPRVDEWEREQMMPL-HEVIADMAKLGFVGLEYDPEYGG 60

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                   +  A   L         M+  V  A     M TP +HK       S E    
Sbjct: 61  QGADHLFTLVLAE-ELGRVDHGSFPMAFGVHVA-----MATPSLHKHG-----SDELKRE 109

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
             AP  +      + +TE   G+D+A I +  ++  D         +  +S  +D   +L
Sbjct: 110 FLAPALRGEQIAAIAVTEPDAGSDVAGIKTHARRDGDDWVINGSKMFITNSVQADWLCVL 169

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VS 305
           A+     G   + +++      G   ++L +K+G  ++ T  + F +    +   +  + 
Sbjct: 170 ARTSDEGGYAGMSQIIVPTKAPGYEVRKL-DKLGMHASDTGLITFDDVRVPVSNTIGEIG 228

Query: 306 TGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G  + M   ++  +  A    + +  +L     YA  RHV G  L     +    A +A
Sbjct: 229 RGFQQQMSQFVMERMFGAYGIPASVNRALQRTKEYALARHVFGKPLTKNQHLAYQYAGLA 288

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                    +  +A  +   ++ + +   A++ A                  ++  GG G
Sbjct: 289 ARADMLEVYNRDIAERYMAGENVTRKVTIAKLTAGPLVREAGDW-------CLQVHGGMG 341

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454
           Y+ E   +R +R+    SI  G+   M+  +
Sbjct: 342 YMTETWTSRFFRDQRLLSIGGGADEVMMRVL 372


>gi|269964394|ref|ZP_06178636.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
 gi|269830891|gb|EEZ85108.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B]
          Length = 347

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 19/304 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLE 147
           P  +  D+    P  + L  +    GL        F        AH I    +   +   
Sbjct: 33  PLAQSIDQTNDFP--NHLWSKLGDMGLLGVTTSEEFGGAGMGYLAHVIAMEEISRASASV 90

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    + S    + +    +    + + PK+ S E+                L ++E   
Sbjct: 91  ALSYGAHSNLCVNQIHRNGSQAQKEKYLPKLISGEH-------------IGALAMSEPGA 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++  + ++  D         W  + P +  +++ A+ +       +   + +   
Sbjct: 138 GSDVVSMQLKAERKGDIFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGITAFIVERGF 197

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G    +  +K+G R + T EL F N       +LG+ N     +        +  A   
Sbjct: 198 PGFTQAQKLDKLGMRGSNTCELVFQNCEVPAENILGEENQGVKVLMSGLDYERVVLAGGP 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  +   + Y   R   G  + +  +++  IAD+   + AA A  + +A + D  +
Sbjct: 258 LGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYTQMNAAKAYVYAVAAACDRGE 317

Query: 385 SRSE 388
           +  +
Sbjct: 318 TTRK 321


>gi|148554758|ref|YP_001262340.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499948|gb|ABQ68202.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 387

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 149/378 (39%), Gaps = 34/378 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            +WD+    P    +  +    GL        +    R     I A  L     +  G  
Sbjct: 31  RKWDRDNHFP--REVHAKLAALGLMGLTVPEEYGGGGRDVRATIMAIELLCGRSMAVGGP 88

Query: 152 MSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              S   A + +A + + R   +  P++              +  +    G++E   G D
Sbjct: 89  YIQSACYAGLNLAEVGSERQKAELLPRVV-------------EEGMIFAYGISEPDVGAD 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGR-VGCFLVPRLLEDGSPN 268
           +A++ + G+   D +  ++G K F S     ++I  L +   R      +  +L     +
Sbjct: 136 VASVRTTGRVEGDRL-IVNGSKRFCSGATIASYIYTLVRTGPREDRHRNLTLVLIPSDAD 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-------LDSA 321
           G+ ++  ++ +G +   T ++ F++    L   +    G      +L+        ++ A
Sbjct: 195 GITFEA-QDALGLKGTGTYDVTFADVSVPLANVVGEEAGFNNAWTMLVGPGLDIEKMEVA 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M++     ++ EA  YA+ R   G  +     ++  +A+    + A  A++++ A++ D
Sbjct: 254 AMALGIASAAVEEAWAYAQERVQFGKPISAFQSVRHMLAEARTKLHACRAVTYQAADALD 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
            A+  S E         + K + C+ A  ++    + +G  GYI+E  + RH R+     
Sbjct: 314 RAEDASLE-------TSMAKLFVCQTAQEIVLACQQVLGAYGYIKEFDMERHVRDILVMP 366

Query: 442 ILLGSGNAMVLDVLNLLE 459
           IL GS      ++ N+L+
Sbjct: 367 ILGGSSAIQKNNICNMLK 384


>gi|118587876|ref|ZP_01545286.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
 gi|118439498|gb|EAV46129.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614]
          Length = 384

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 106/312 (33%), Gaps = 24/312 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  T     +W P   S                     LTE + 
Sbjct: 85  ADFAFAMQGLGTGAISLFGTDEQKAEWLPLTRSG-------------KAISAFALTEPQS 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T       D         W  +  ++D + + A+     G   +   +     
Sbjct: 132 GSDVANSTMTATDDGDAYVLDGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDL 191

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G         I     AT  L F+         ++    G    M +L       A  +
Sbjct: 192 KGFEVVERLETIAPHPLAT--LRFTGCRVPKKNMISTPGAGFRIAMSVLDIFRSTVAAAA 249

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+     R + G  L D  +++  IAD+ALD+ AA  L +R A + D   
Sbjct: 250 LGFARRALDEALSRVTTREIQGSPLFDLQLVQGHIADMALDVDAAALLIYRAAWTKDSGA 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R          A + K +    A  VI +A++  GG G      + + YRE  A  I  
Sbjct: 310 PR------VTREAAMAKLFATDQAQKVIDKAVQLHGGDGVRSGTQVEKLYREIRALRIYE 363

Query: 445 GSGNAMVLDVLN 456
           G+ +   + +  
Sbjct: 364 GASDVQKIIIAR 375


>gi|33595664|ref|NP_883307.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565743|emb|CAE36287.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 377

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 111/279 (39%), Gaps = 9/279 (3%)

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
            P     + +   A+   L+E+  G+D  A+ +  ++   G        W  +   S  F
Sbjct: 99  FPVLLGGLAREGRAVNFALSERGAGSDAGAVQATAEREGAGWRIRGEKCWLGNGGHSHHF 158

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--NTFGFLLGD 301
           I+ A+         +   +     +G+     ++K+G R   T  L+         L+G+
Sbjct: 159 IVFARTGPEGQRNNISAFVVAREADGVVVDFYEDKMGIRGTTTTNLKLDTWVAEDALVGE 218

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           L            +  +  A  +      + AEA  +A  R   G  +ID   +   +AD
Sbjct: 219 LGHGLKLALATLTIGRVVVAAQANGIALCAYAEACDFAVSRETFGRSIIDHQGIGFKLAD 278

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               ++++  + +  A ++D  +  S   A A+++A        +++  V+ +AM+ +GG
Sbjct: 279 AMTGLSSSRMMVYEAARAYDAGEDISTLGAMAKLLA-------SEVSHTVVDDAMQVLGG 331

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GY++  +  R YR+     I  G+     + +   ++K
Sbjct: 332 RGYVKPSAAERCYRDQRITEIYEGTSEIQRVVLARAIKK 370


>gi|73541869|ref|YP_296389.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72119282|gb|AAZ61545.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 389

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 133/372 (35%), Gaps = 30/372 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGH 150
           + D  +   A   L+R+    G        +    +     +        +A+ +  A  
Sbjct: 32  KVDHSDTDAACRTLVRQLGEAGWLRYCVPAAHGGALPALDSRSLCLLRETLARHDGLADF 91

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +     +  ++L  +  V K + P++   E                   L+E   G+D
Sbjct: 92  AFAMQGLGSGAISLAGSDAVRKRYLPRVARGE-------------AIAAFALSEPDAGSD 138

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +AA+    Q  + G          W  +  ++D + +  +     G   +   + D    
Sbjct: 139 VAAMRCSAQLDAGGTHYVIDGAKTWISNGGIADFYCVFVRTGEAPGARGISAFVVDADTP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           GL      + +     AT  L F N    +   L     G    M  L       A  ++
Sbjct: 199 GLSIAERIDVMAPHPLAT--LRFDNCRVPVGNRLGEAGQGFKVAMMTLDIFRASVAAAAL 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAK 384
              R +L EA+  AR R + GG+L D  + + AI D+A  I AA  L++R A   D +  
Sbjct: 257 GFGRAALDEALARARARPMFGGVLADLQLTQAAIGDMATAIDAAALLTYRAAWLRDVKGV 316

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             + EAA A+++A        + A  VI  A++  GG G      +   YRE  +  I  
Sbjct: 317 RTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVKVGTRVEGLYREIRSLRIYE 369

Query: 445 GSGNAMVLDVLN 456
           G+     L +  
Sbjct: 370 GATEVQKLIIAR 381


>gi|33603388|ref|NP_890948.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577512|emb|CAE34777.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 389

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/376 (19%), Positives = 131/376 (34%), Gaps = 30/376 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLY----LMAQLE 147
            D  +   A  AL+R     G   +            R      RA  +           
Sbjct: 34  IDHRDTDAACRALVRSLGQAGWLRYAVPAGPGGGWGGRLPKVDSRAVCILRETLARHDGL 93

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++LM +  + + + P             P+ +        L+E   
Sbjct: 94  ADFAFAMQGLGSGAISLMGSDALRQQYLP-------------PVARGEAIAAFALSEPEA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+  + +   DG        W  +  ++D + + A+     G   +   + D   
Sbjct: 141 GSDVAALACEARADGDGYVLNGEKTWISNGGIADFYCVFARTGEAPGARGISAFVVDAGT 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F++        L     G    M  L       A  +
Sbjct: 201 PGLEIAERIDLIAPH--PLARLRFADCRIPASRRLGEAGQGFKLAMMTLDIFRASVAAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E +  AR R + G  L D  + + A+ D+A  + A+  L++R A   D  +
Sbjct: 259 LGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDMATAVDASALLTYRAAWMRDVQE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R+         A + K    + A AVI  A++  GG+G +   ++ R YRE  A  I  
Sbjct: 319 VRT------TREAAMAKMTATESAQAVIDRALQMFGGAGVVAGATVERLYREIRALRIYE 372

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L K
Sbjct: 373 GATEVQKLIIARELLK 388


>gi|15922588|ref|NP_378257.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15623378|dbj|BAB67366.1| 379aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 379

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/367 (20%), Positives = 139/367 (37%), Gaps = 28/367 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E +     +++     GL        +  +   +     A          A H +     
Sbjct: 33  ETNDGGDKIVKDLGEMGLLGMKQPTKYGGLGLGEMAFAIATEELGAESGGASHSLHTQQN 92

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +  ++  +      ++W  K               K      + LTE + G+D+ A+ + 
Sbjct: 93  ALQLLVSVGGDS-AQEWIEK-------------GIKAKEVYAVALTEPQAGSDLGALQTT 138

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRL 275
            +   + +  L+G K F S+   S   ++LA+  G  G    +  LL D    G+   +L
Sbjct: 139 AKPDGNEL-VLNGEKIFTSAASFSTKMVVLARTSGNPGDRQGISLLLIDSKLPGIEIHKL 197

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            + +G R      ++F+N       ++G    +        ++     A ++V   R +L
Sbjct: 198 -DIMGIRGAGVSYVKFNNVRIPKDSIIGKEGDAYRGALKALMVSRNGYAGIAVGIARGAL 256

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            EAI  A+ R   G  LI+Q  +   +AD  + + AA  L++R A  FD     + EA+ 
Sbjct: 257 EEAISRAQSRKQFGKALIEQEWISFNLADAYIKVEAARLLTWRAAQLFDNDYEATTEASM 316

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+  A +T       A  V   A+   GG G      + R YR++    I  G+    ++
Sbjct: 317 AKYYAAVT-------ATEVTRLALHIFGGHGLNRGSKVERLYRDAKIMEIAEGTNEMQLV 369

Query: 453 DVLNLLE 459
            V  L +
Sbjct: 370 AVSRLFQ 376


>gi|303276074|ref|XP_003057331.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461683|gb|EEH58976.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 474

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 136/425 (32%), Gaps = 29/425 (6%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA 137
           P +  +       + V+       +  +S   G+        W + +      + +    
Sbjct: 65  PIVDDWDKQAVTNNHVKCGEYIKTMYSKSAKYGILPACVGKPWPKKYTSAPEPEGYDYF- 123

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
               L+   E          +      +  P +     P    R                
Sbjct: 124 --HELINVDEGTRAGGGIAWAMMGGLGIGMPPILNFGIPG--DRALQDRCIRECLAGEKI 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CF 256
           I L +TE   G+D++ +    +   D        KW  +   +D F +  +         
Sbjct: 180 ICLCITEPGAGSDVSNLQCTAKDAGDHYVVEGNKKWITNGIYADYFTVAVRTGPPGSMHK 239

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
            +  LL + S  G+   ++ + +G   + T  +EF N       ++G +N     V    
Sbjct: 240 GLSMLLMEKSMPGITVSKM-DCMGVWPSGTTYIEFDNVKVPKTNIVGKVNEGFKQVMYNF 298

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A  +    R  + EA+ +AR R   G  LI+   ++  I ++A       A  
Sbjct: 299 NHERWLLAAQAARMARTCVEEALSFARTRRTFGKFLIEHQAIQHKIGEMARQCEGLQAWL 358

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SI 430
             +        S+ E+         + K    ++A    + AM+ +GG+GY        +
Sbjct: 359 ENVTFQM-NTMSKEEQNKKLGGHIALLKLSSSRVAEFCASNAMQVLGGAGYTRTGKGVKV 417

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490
            R YRE  A +I  GS   M+           NL    F  + + +     K I  L + 
Sbjct: 418 ERIYREVKAYAIPGGSEEIML-----------NLAAGQFGFVSRAMPDPRDKKIKALMEE 466

Query: 491 ISLCK 495
           +   K
Sbjct: 467 LKRIK 471


>gi|256396543|ref|YP_003118107.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362769|gb|ACU76266.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 388

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 10/294 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           +  +         P+ +        +TE   G+D   +T+  +K+ DG + + G KWF++
Sbjct: 98  RFCTPGQRERFLEPVIRGERRDCYAVTEPNAGSDPQNLTTTARKVDDG-WSIDGEKWFVT 156

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                 FI++    G          L D +  G+  QR    +        E  F++ F 
Sbjct: 157 VGDHADFIIVLAAAGEDRAP--TLFLVDKATQGVAVQRTPRFMHTFVYEHPEFTFTDVFV 214

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               +LG L               L  A  ++     +L  A  +A RR   G  + +  
Sbjct: 215 PDDQVLGGLGEGYDITRAWFTEERLMIAARTIGAAERALELAREWAVRREQFGQPIANFQ 274

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +AD A+DIA   A   ++A    +  +  +        A I K    + +  VI 
Sbjct: 275 LIQGMLADCAVDIAVNRAYFLQVAWEISQPDADRKT---LHAKAAIAKLTASEASNRVID 331

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFE 466
             ++  GG GY    ++ R YRE   + I  G+     L +   L+++GTN+  
Sbjct: 332 RCVQIFGGRGYDRSYAVERLYRELRVDRIWEGTSEIQRLIISGELIKRGTNVLR 385


>gi|158424811|ref|YP_001526103.1| putative acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331700|dbj|BAF89185.1| putative acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 393

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 123/360 (34%), Gaps = 26/360 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
            R      L  ++     +    +      A          A    +        +AL  
Sbjct: 56  ARLGATGLLEAAVPTPEADGTSIRSLELCLARETLAWHDGLADFAFAMQGLGTGAIALAG 115

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +  + ++  PK+   E+                  L+E   G+D+AA++   +   D   
Sbjct: 116 SDALKREVLPKVRRGEW-------------LAAFALSEADAGSDVAAMSCAARADGDHYV 162

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 W  +  ++D + +  +     G   +   +      G       + I     AT
Sbjct: 163 LDGEKTWISNGGIADVYTVFVRTGEAPGTRGISAFVVFADDPGFSIVERIDVIAPHPLAT 222

Query: 287 VELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             + F          L     G    M+ L       A  ++   R +  EA+H+ R R 
Sbjct: 223 --IRFDGCRIPASRRLGAAGEGFKIAMRTLDIFRASVAAAALGFARRAFDEALHHVRSRR 280

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKY 402
           + GG L D  + + A+ D+A ++  A  L++R A   D +    + EAA A++ A     
Sbjct: 281 MLGGTLADLQLTQAALGDMAAELDGAALLTWRAAWRRDVQGLPTTREAAMAKMTA----- 335

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              +MA  VI  A++  GG G     ++   YRE  A  I  G+     L +   L K  
Sbjct: 336 --TEMAQRVIDRAVQLHGGRGVRSGETVEALYREIRALRIYEGATEVQKLIIARELLKAG 393


>gi|147677910|ref|YP_001212125.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274007|dbj|BAF59756.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 379

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 123/365 (33%), Gaps = 28/365 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE 147
           P     D+    P+    ++           +   +         + +    L       
Sbjct: 26  PQAAEIDRTGRFPS--ETVKAMAELDFMGMFFPPEYGGAGTDFMSYILMLEELSRFCAST 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +  L +     +  V    +    K +                M K     G  L E   
Sbjct: 84  SAILATHCSLVSYPVFKYGSESQKKKYL-------------TAMCKGEKLGGFALAEPGA 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
                          D  Y L+G K+F+ +  ++D +++ AQ     G   +   + +  
Sbjct: 131 APASGPERVVAIMDGDD-YLLNGKKYFVLNGGVADIYVVFAQTGQSAGMKGLSAFIVEAG 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G   +R   K+G R+  T E+ F  T      LLG  N     ++D      + +A  
Sbjct: 190 IPGFKVKRQIEKMGLRAQPTAEMVFEKTRVSRENLLGAENQGYEILKDTLAFAGVAAAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                + +L  ++ YA+ R   G  +     ++  +AD+A ++      +++ A+   E 
Sbjct: 250 VAGICQTALELSVKYAKERVQFGRPIACLQAIQWMLADMAANVHMIRLATYKAASLIQED 309

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K+ + EAA       I + +  +    V  +A++  GG GY +E  + R  R+     I 
Sbjct: 310 KTIAYEAA-------IARMFAARAGVDVCMDAVQIHGGYGYGKELIVERLLRDVKGIIIF 362

Query: 444 LGSGN 448
             S  
Sbjct: 363 ENSSE 367


>gi|114800342|ref|YP_762052.1| isobutyryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114740516|gb|ABI78641.1| isobutyryl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 566

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 144/394 (36%), Gaps = 46/394 (11%)

Query: 95  DKVE-FHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           D++  +   WH         ++      G+        F  +   +              
Sbjct: 194 DRIRPYAHGWHLRNDYIPMEVVDEMAELGVFGLTIPEEFGGLGMGKTAMCVVTEELSRGY 253

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +  G L + S  +A ++ +  TP     W P I S E  PT                TE 
Sbjct: 254 IGTGSLGTRSEIAAELILIGGTPEQKAKWLPVIASGEILPTAV-------------FTEP 300

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF-LVPRLL 262
             G+D+ ++ ++  K +DG  Y ++G+K +++ P+ +D   ++A+ +     F  +  LL
Sbjct: 301 NTGSDLGSLRTRAVKSADGTHYAVTGNKTWITHPVRADLMTLMARTDPATNNFSGLSMLL 360

Query: 263 EDGSP---------NGLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPV 309
            +             G+    ++  +G R     E+ F N        L G        +
Sbjct: 361 AEKPRGTDAEPFPAEGMTGGEIE-VLGYRGMKEFEIGFDNFKVKSENLLGGVEGQGFKQL 419

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                   + +A  +V   + +L   + YA  R   G  +   P +   +  +A ++   
Sbjct: 420 MATFESARIQTAARAVGVAQNALEVGLRYALDRQQFGQAIFKFPRVSNKLVMMAAELVGM 479

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L++  A   D  K    EA  A+++A            A    A++  GG+G+  E  
Sbjct: 480 RQLTYFSARQKDNGKRCDLEAGMAKLLAARAA-------WAAADNAVQIHGGNGFALEYP 532

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           I+R  +++   +I  G+G    + +   L +G N
Sbjct: 533 ISRILQDARILNIFEGAGEVQAMVIARRLVEGGN 566


>gi|302866760|ref|YP_003835397.1| Butyryl-CoA dehydrogenase [Micromonospora aurantiaca ATCC 27029]
 gi|302569619|gb|ADL45821.1| Butyryl-CoA dehydrogenase [Micromonospora aurantiaca ATCC 27029]
          Length = 390

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 115/375 (30%), Gaps = 58/375 (15%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++   G         +  +           +  +  +L    +       A  + 
Sbjct: 48  RELQLKAKKFGFWGLATPEEYGGMDLP-----AVMQSLIWTELGRSFVPFRFGGEADNIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    +++               P  +        +TE   G+D A I  + ++  D
Sbjct: 103 FHATEEQKREFLI-------------PTIEGERISCFAITEPGAGSDAANIKLRARRDGD 149

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIG 280
             + L G K F+++   +D  I++A  +   G         L D +            +G
Sbjct: 150 D-WILDGEKTFITNGNDADFAIVVAVTDPEKGARRGGATAFLVDRA------------MG 196

Query: 281 NRS---NATVE-----LEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDSAIM-----SVS 326
            RS       E     L F          L  +  G    M    ++          ++ 
Sbjct: 197 WRSEFIQTMGEGGPASLIFDGVRVPHRNILGEIGQGFTLGM---EWIGKGRYTIPSHAIG 253

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +L  AI +A  R   G  +     ++  IAD   ++ AA  L  R A + D+    
Sbjct: 254 IAERALQMAIDHANTRETFGAPIATNQAIQWMIADSETELEAARWLILRSAWTVDQGLDP 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              ++         K +   M   V+   ++  GG GY  E  I R YR+     I  G+
Sbjct: 314 RHASSMG-------KLYGAGMVNRVVDRVLQIHGGMGYTRELPIERWYRQVRLYRIFEGT 366

Query: 447 GNAMVLDVLNLLEKG 461
                L +   L  G
Sbjct: 367 DEMQRLIISRDLLCG 381


>gi|229580881|ref|YP_002839280.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|228011597|gb|ACP47358.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
          Length = 398

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +++   GL+     +            + A              +  +      ++ 
Sbjct: 50  EVKQKAKEIGLYGLFARQDLGGQGADYLSLLTATEEMARIWPSFSTFLLINWMFIYALSR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + K +               P+          +TE   G+D+A I +  +K+ D 
Sbjct: 110 FGNEELRKKYV-------------TPVANGDKVAAFAVTEPVAGSDVAGIKTTAKKL-DS 155

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
            Y ++G K F+++   +D +++ A+    + +     +  L+ +     +    R++   
Sbjct: 156 EYVINGRKIFITNGDIADYYLIAARTSPPDPKARWKGISMLVVEKDA--VKPVSRIETT- 212

Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G +S+ T E+   +       LLG+                   A  ++   + +L + I
Sbjct: 213 GLKSSHTAEILLEDVKTPAENLLGEEGNGFKYAVSSFDFARTIVASQALGIGQAALEKMI 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           +Y+ +R      L +  +++  +++   D+  A  +++     F   K      A     
Sbjct: 273 NYSLQRTAFEKKLAEFQLVQTKVSESLADLEVARLITYWAGTLFKNGKENEYTVA----- 327

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A + K+   + A  +I  AM   GG G      + R  R+        G+ +   +    
Sbjct: 328 ASLAKFISTESAERIILRAMSVYGGYGVTTSTGLERMLRDLQIMKTYEGTNDIQRISAAR 387

Query: 457 LL 458
            L
Sbjct: 388 FL 389


>gi|328774443|gb|EGF84480.1| hypothetical protein BATDEDRAFT_15770 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 535

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 142/392 (36%), Gaps = 21/392 (5%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           P    WD+ +  P    L  ++ + G+    + + +   +    R     I+   + +  
Sbjct: 150 PNCHEWDEAKQLP--RELFTKAGNAGILQLINGTPFPEKYSE--RPPPVGIKPEEMDVFH 205

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +      ++   +   +  L+    +         S            +    I L +TE
Sbjct: 206 EFIVADELARCGSGGVLWGLIGGLGIGLPPIIHFGSDYLKDKVVKDCIQGRKNICLCITE 265

Query: 205 KRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D+A + ++ +K  +G  Y ++G K ++++ +   +  +A   G  G   V  LL 
Sbjct: 266 PSAGSDVANLMTEAKKTPNGEHYIVNGEKKWITNGVFADYFTVAVRTGGPGMNGVSLLLI 325

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  + +    G  ++ T  + F +       L+G  N     +        +  
Sbjct: 326 EKSMPGVKTRHMPCS-GVWASGTTYITFEDVKVPVKNLIGKENKGFKCIMYNFNHERMGI 384

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           AI +    RV + E+I YA +R   G  LID PV++  +  +   + A  A      +  
Sbjct: 385 AIQATRFARVCVEESIKYAHKRKTFGKKLIDHPVIRNKLGHMVRKVEATHAWME---SLL 441

Query: 381 DEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYR 435
            + K   E+    ++  PI   K    +       EA +  GG  Y        + R YR
Sbjct: 442 YQTKCMPEDQQMLKLGGPIALLKVQSTQTMEFCAREAAQIFGGLSYSRGGQGEKVERLYR 501

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           E  A +I  GS   M+   +    K       
Sbjct: 502 EVRAYAIPGGSEEIMIDLGIRQSIKVAQFMGA 533


>gi|308176382|ref|YP_003915788.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307743845|emb|CBT74817.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 392

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 120/353 (33%), Gaps = 33/353 (9%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL     D           + I  A L          +      + S +    +   
Sbjct: 61  AKLGLLGMHLDGYGCGGRSAVEYGIAGAELEAGDSGLRTFVSVQGSLAMSAIYKHGSEEQ 120

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W PK+ + E                  GLTE   G+D +++T+  ++  D       
Sbjct: 121 KQQWLPKMAAGE-------------AIGCFGLTEPTAGSDPSSMTTFARRDGDDWVINGS 167

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            +W   + ++   ++ AQ E  +  F+VP      +  G     ++ K+  R++   E+E
Sbjct: 168 KRWIGLANVAQVAVIWAQTEEGIRGFVVPT-----NTPGFTATPIEQKLSMRASIQCEIE 222

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVS 345
             +     L    V    V        L+ A   +        R +  +A+ Y++ R   
Sbjct: 223 MVDMR---LPGSAVLPNVVGLKGPFSCLNEARYGILWGSMGAARDAFEDALAYSQERLQF 279

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L    + ++ + D+AL+I     L+  +    D  K           M  + K   C
Sbjct: 280 DKPLAGYQMTQQKLVDMALEINKGFLLALHIGRLKDAGK-------LDLHMISVGKLNNC 332

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + A A+  EA   +GG+G   + S  RH     +     G+     L + N L
Sbjct: 333 REAIAICREARTILGGNGITLDYSPLRHANNLESVRTYEGTDEVHTLILGNKL 385


>gi|33599653|ref|NP_887213.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567250|emb|CAE31163.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 408

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 109/302 (36%), Gaps = 26/302 (8%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    + + P + S E             +    GLTE   G+D   + ++ 
Sbjct: 118 MYPIHTFGSEEQRQTYLPGLASGE-------------LVGCFGLTEPDHGSDPGGMATRA 164

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           + ++ G        W  +SP++D F++ A+ +       +   + D    GL  +R+  K
Sbjct: 165 RGVAGGYRLSGAKSWITNSPIADVFLIWAKDDAGD----IRGFILDRGMQGLSTERIDGK 220

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
              R++ T  +     F      L    G       L    L  +  ++      L +A 
Sbjct: 221 FSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFSCLNKARLGISWGALGAAEACLHQAR 280

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  L    ++++ +AD+  +IA     S ++A   D+ +  +E        
Sbjct: 281 DYVLARTQFGRPLASNQLVQKKLADMETEIAIGLQASLQVARLMDQGRVSTEA------- 333

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K   C  A  +   A + +G +G  +E  I RH     A +   G+ +   L V  
Sbjct: 334 ISIIKRNNCGKALEISRVARDMLGANGVSDEYHIIRHMINLEAVNTYEGTHDIHALIVGR 393

Query: 457 LL 458
            +
Sbjct: 394 AI 395


>gi|239609836|gb|EEQ86823.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 428

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 95/476 (19%), Positives = 156/476 (32%), Gaps = 78/476 (16%)

Query: 2   TLREIYRRL-------AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV 54
           T+R  +RRL       + N   + + S    N        N Y+ D L           +
Sbjct: 5   TVRHAFRRLHAANHFVSNNIPRRYAHSTATFNWQDPLGTTNLYTEDEL----------AI 54

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
                   +  L+    E  R  NY+                         ++R     G
Sbjct: 55  QDTARQYCQERLAPRILEAYRNENYD-----------------------KEIIREMGELG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L  +  D      V   A  +    +  +       +   S    + +    T      +
Sbjct: 92  LLGATIDGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLIMTGIHKFGTQAQKDKY 151

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK 232
            P +              K       GLTE   G+D +++ S  +      G Y +SG K
Sbjct: 152 LPDL-------------AKGKKLGCFGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSK 198

Query: 233 -WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVE 288
            W  +SP+SD F++ A+    G++  F++ R   D  P G L    +KNK   R++ T  
Sbjct: 199 TWITNSPISDYFLVWAKLETTGKIKGFIIER---DQCPPGTLETPAIKNKTALRASITGM 255

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRH 343
           ++  +             G V        L+SA + ++      +   +  A  YA  R 
Sbjct: 256 IQLDSCPVPEANMFPDVEGLV---GPFTCLNSARLGIAFGTMGALEDCIDRARTYALERK 312

Query: 344 VS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD A D A  T  + ++A   DE KS  E       M  I K 
Sbjct: 313 QFKGNPLAKYQLVQKKLADAATDAAYGTLAAVQVARLNDEGKSVPE-------MISIIKR 365

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             C  A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 366 QNCDRALVGARTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAM 421


>gi|218291045|ref|ZP_03495077.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238999|gb|EED06205.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 404

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 127/337 (37%), Gaps = 35/337 (10%)

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            + AA             +         V    TP   + +       E           
Sbjct: 83  GVIAAEELAWGDPAIALSLPGPGLGGPPVQSTGTPEQKERFLGIFTKDEPR--------- 133

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR 252
                   LTE   G+D++ I +  +K+ DG Y L+GHK ++++    ++++  A V+  
Sbjct: 134 ---WGAYALTEPGAGSDVSGIRTSAKKV-DGGYVLNGHKVYITNGGRASWVVTFATVDPS 189

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-----TG 307
           +G       + +    G    R+ +K+G R++ T EL F + F  +   L          
Sbjct: 190 LGRAGHRAFVVEKGAPGFTCTRVAHKMGLRASETAELVFEDCFVPIDNLLGGEAHYENRA 249

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361
                ++ +   DS    V+ M V +A A +     + +R +  G  +     +   + +
Sbjct: 250 GSSGFRVAMSTFDSTRPIVAAMAVGIARAAYEYTLEFVKREYPRGQRVRH--DVLAKLGE 307

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   I AA  L++  A   D  +  ++EAA  +  A        +++  V ++ +E +G 
Sbjct: 308 MDAKIHAARLLTWEAAWKADLGQPNAKEAAMCKAHAG-------RISLEVCSDCLEIMGP 360

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G ++   + + YR+     I  G+     L V   L
Sbjct: 361 IG-LDGHLVEKLYRDVKVFDIFEGTNQIQHLIVARRL 396


>gi|33595354|ref|NP_882997.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565431|emb|CAE36240.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 408

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 109/302 (36%), Gaps = 26/302 (8%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +    +    + + P + S E             +    GLTE   G+D   + ++ 
Sbjct: 118 MYPIHTFGSEEQRQTYLPGLASGE-------------LVGCFGLTEPDHGSDPGGMATRA 164

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           + ++ G        W  +SP++D F++ A+ +       +   + D    GL  +R+  K
Sbjct: 165 RGVAGGYRLSGAKSWITNSPIADVFLIWAKDDAGD----IRGFILDRGMQGLSTERIDGK 220

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
              R++ T  +     F      L    G       L    L  +  ++      L +A 
Sbjct: 221 FSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFSCLNKARLGISWGALGAAEACLHQAR 280

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  L    ++++ +AD+  +IA     S ++A   D+ +  +E        
Sbjct: 281 DYVLARTQFGRPLASNQLVQKKLADMETEIAIGLQASLQVARLMDQGRVSTEA------- 333

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K   C  A  +   A + +G +G  +E  I RH     A +   G+ +   L V  
Sbjct: 334 ISIIKRNNCGKALEISRVARDMLGANGVSDEYHIIRHMINLEAVNTYEGTHDIHALIVGR 393

Query: 457 LL 458
            +
Sbjct: 394 AI 395


>gi|149918470|ref|ZP_01906960.1| acyl-CoA dehydrogenase family protein [Plesiocystis pacifica SIR-1]
 gi|149820770|gb|EDM80180.1| acyl-CoA dehydrogenase family protein [Plesiocystis pacifica SIR-1]
          Length = 619

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/488 (17%), Positives = 162/488 (33%), Gaps = 70/488 (14%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNT-PQLHAYGPGGER-WD-KVEFHPAWHALLRRSI 111
                     +     +  A++A     P        G    D +++       L   ++
Sbjct: 29  LPHFAEHTREIFDLWLRSAAKLAREQFYPAFKPMDEKGAELIDGRIKSPEGMAELFDAAV 88

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL  +    S           +      +     A      +  +A ++    +  + 
Sbjct: 89  DLGLITAARPESVGGSQLPLTVSVVGYLYLMAGNSGAVGYPLLTAGAAHLIESFGSEALK 148

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----KISDGIYC 227
             +  ++++ E+  T             + LTE   G+ +  ITS       + ++G + 
Sbjct: 149 ATFMKRMYAGEWVGT-------------MSLTEPGAGSGLGDITSTATPIEGREAEGAHH 195

Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRL-----LEDGS----- 266
           + G K F+S    D       + LA+  G       +  F VPRL     LED S     
Sbjct: 196 IRGSKIFISGGDLDFRDNIVHLTLARRPGDPPGVKGISLFAVPRLRPSAGLEDPSNEDAG 255

Query: 267 -------PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKILI 316
                   N +   +L +KIG +   ++ L +    +  G+++G+       +  M    
Sbjct: 256 EGEIAVEFNDVHTSQLIHKIGWKGLPSLGLSYGEADDCVGWIVGEPCRGLSYMFQMMNEA 315

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILIDQPVMKRAIADIALD 365
            +       +    +  +++ YAR R                 +I+ P +KR +      
Sbjct: 316 RILVGANGTATASAAYHQSVDYARERKQGRSLDPRQKTKEPIPIIEHPDVKRMLLRQKAI 375

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECI 419
           + A+  L    +   D A+  + E           I+ PITK +  +      + A++  
Sbjct: 376 VEASMCLVMTASRYNDVAEHGANEGDRKRARMILDILTPITKTFPAERGFESTSLALQIH 435

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLG 477
           GG GY  E      +RE   NSI  G+     LD+L   ++         L   +  D+ 
Sbjct: 436 GGYGYSSEYLPELWFREQRLNSIHEGTTTIQGLDLLGRKVVANMGQSLMVLMEEIRADIE 495

Query: 478 SSGKKVIT 485
            + K  + 
Sbjct: 496 VARKDGVD 503


>gi|195115427|ref|XP_002002258.1| GI17285 [Drosophila mojavensis]
 gi|193912833|gb|EDW11700.1| GI17285 [Drosophila mojavensis]
          Length = 419

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 130/386 (33%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R ++ +       ++      G+            V   A+ +    +
Sbjct: 57  QAELLPRVKMANRLEQFD-----KKIMEEIGSLGVLGCTLQGYGCAGVSSVAYGLLTREV 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P +              +  +    
Sbjct: 112 ERIDSAYRSAVSVQSSLAMGAIYDYGSDEQKQKYLPGL-------------AQGKLIGAF 158

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFL 257
           GLTE   G+D A + +  +  S    Y L+G K W  S+P++D  I+ A+ E      F+
Sbjct: 159 GLTEPNHGSDPAGMETNAKYDSKTKTYILNGSKTWITSAPIADVIIVWAKCEDSKLRGFI 218

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           + R L   +  GL   +++ K   R++ T  +   +        L  + G          
Sbjct: 219 IDRQL---TSKGLDTPKIEGKFSLRASPTGMILMDDVRVPEELLLPNALGFSGPFN---C 272

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD   +IA     
Sbjct: 273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADATTEIALGLQA 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+     E       M  + K      A  +  +  + +GG+G  +E  + R
Sbjct: 333 CLHVGRLKDKKLHTPE-------MISLLKRNNAGKALEIARQMRDMLGGNGISDEYHVIR 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 386 HVMNLESVNTYEGTHDIHALILGRAI 411


>gi|325517518|gb|ADZ24990.1| prolyl-ACP dehydrogenase [Sorangium cellulosum]
          Length = 379

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/415 (14%), Positives = 140/415 (33%), Gaps = 48/415 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP--AWHALLRR 109
           S   + L+LLG    +   +    +A                 D+ E      W A    
Sbjct: 3   SYTRERLDLLGRVRSAAEERMNGELAE---------------LDRTETFNLKGWQACADL 47

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---VALMT 166
               G+      R +          + A         + G +++      +    +    
Sbjct: 48  ----GVLGYRVPRRYGGQELDVLDTVAALEGLGQGCRDNGLMLAVGAHIWACEVPILAFG 103

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T     ++ PK+ S E             +     ++E + G+D++++++   +  D   
Sbjct: 104 TEEQKLEYLPKLASGE-------------LVACHAVSEPQAGSDVSSVSTTAVRRGDRYV 150

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                 +  ++P++   I+ A ++   G   +   L +    G+  +++ +K+G R+   
Sbjct: 151 LNGRKLYVTNAPIAGLCIVFATLDPAAGPRGLTAFLVEPDSAGMAVRKV-SKMGLRTAQM 209

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHYARRRH 343
            E+   +    L   L      ++     +  +       +V  M   L   + +AR R 
Sbjct: 210 GEISLVDCEVPLKNLLGKEREGLDIFNHSMEWERGFILAPAVGSMERVLQRCVRHARSRK 269

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +     +   + D+ L I  + +L   +A+   + +S       A   A + K  
Sbjct: 270 QFGAPISSFQAISHKLVDMKLRIETSRSLLHGVAHLKQQGRS-------ALGAAAMAKLH 322

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +    V  +A++  G  GY+ E  + R  R+   + I  G+       +  L+
Sbjct: 323 ISESWTQVCLDALQIHGAQGYLCENELEREVRDVLGSKIFSGTSEIQRRIIAQLM 377


>gi|146304835|ref|YP_001192151.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145703085|gb|ABP96227.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 378

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 14/286 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              +   T      K      + LTE   G+D+ A+ +  +   + +  ++G K F S  
Sbjct: 99  VGGDSAKTWIEEGVKGKEIYAVALTEPGAGSDLGALQTTAKLEGNEL-VINGEKIFTSGA 157

Query: 239 -MSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             S   ++LA+  G  G    +  LL D    G+   +L + +G R      ++F+N   
Sbjct: 158 SFSTKMVVLARTSGNPGDRQGISMLLVDTKTPGIEVHKL-DLMGIRGAGVSYVKFNNARV 216

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               ++G    +        ++     A ++V   R +L +A++ A  R   G  L++Q 
Sbjct: 217 PKDSIIGKEGDAFRGAIKALMVSRNGYAGIAVGIARGALEDAVNRAASRKQFGKSLLEQE 276

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD  + + A+  L+ R A   D+      EA+ A+ MA IT       A  V  
Sbjct: 277 WISFNLADALVKVEASRLLTMRAAYMLDKGIEALTEASMAKYMAAIT-------AAEVSR 329

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            A+   GG G      + R YR++    I  G+    ++ V   L+
Sbjct: 330 TALHIFGGHGLNRGSKVERLYRDAKIMEIAEGTNEMQLIAVSRALQ 375


>gi|284041881|ref|YP_003392221.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283946102|gb|ADB48846.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 389

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 132/387 (34%), Gaps = 38/387 (9%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P++      GE       H    AL  ++   G        ++              +  
Sbjct: 29  PEVLQRERRGE---SALTHEELRALQAKARDFGFWGLGTPAAYGGADLP-----AVTQSL 80

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L +++    +         ++         +++               P  + + A    
Sbjct: 81  LWSEVGRTFVPFVFGGETDVILYRANAEQREEYL-------------LPAIEGTRASCFA 127

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL-VP 259
           +TE   G+D+ AI  +  +  D  + L+G K F++    +D  I++A  +  +G      
Sbjct: 128 VTEPDAGSDLTAIRMRAVRDGDD-WVLNGEKTFITRGREADFSIVIAVTDAELGYRGGFT 186

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYL 318
             L D +          + +G  +     + F +        L  V  G    M+ +   
Sbjct: 187 AFLVDRALG--WTSETIDTMGP-ARPIS-MAFDDVRVPHRNVLGEVGDGFRLAMEWIGRG 242

Query: 319 DSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              I   ++      L  A+ YA +R   G  + +  +++  +AD  +++ +A  L    
Sbjct: 243 RYVIPSQAIGAAERLLGMAVEYATQRRTFGKPIGEHQMIQAMLADSEVELESARWLVLLA 302

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A + D+ +    +++ A++           MA  V+   M+  GG GY  E  I R YRE
Sbjct: 303 AWTVDQGRDPRHQSSMAKLAGAT-------MANRVVDRVMQIHGGMGYTRELPIERWYRE 355

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN 463
           +    I  G+       +   L  G  
Sbjct: 356 ARLWRIYEGTDEIQRRAIAKNLLSGRR 382


>gi|307942624|ref|ZP_07657972.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307774263|gb|EFO33476.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 562

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 134/368 (36%), Gaps = 37/368 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +  +   +      +     A +  G L + S  +A ++    T    
Sbjct: 216 ELGVFGLTIPEEYGGLGLGKEAMCVVSEELSRAYIGVGSLGTRSEIAAELILCGGTNEQK 275

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W P I S E  PT                TE   G+D+A++ ++  K  D  + +SG+
Sbjct: 276 EKWLPLIASGETLPTAV-------------FTEPNTGSDLASLKTRAIKEGD-TWKISGN 321

Query: 232 KWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQRLKNKIG 280
           K +++ P+ +D   +LA+      G   +   + +             G+    ++  +G
Sbjct: 322 KTWITHPVRADIMTLLARTNPNEPGYKGLSMFIAEKPRGDDDTPFPAEGMSGGEIE-VLG 380

Query: 281 NRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     E+ F          L          +        + +A  ++   + +L   +
Sbjct: 381 YRGMKEYEIAFDGFEVSNENLLGQVEGQGFKQLMQTFEGARIQTAARALGVAQSALDLGL 440

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  LI  P +   +A +A ++  A  L++  A   D  +    EA  A+++
Sbjct: 441 RYAEDRIQFGKPLISFPRVSDKLALMAAEVMTARQLTYFSAWEKDSGRRCDLEAGMAKLL 500

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A A    A++  GG+G+  E +++R   ++   +I  G+       +  
Sbjct: 501 -------GARVAWAAADNALQIHGGNGFALEYAVSRVLCDARILNIFEGAAEIQAQVIAR 553

Query: 457 LLEKGTNL 464
            + +   L
Sbjct: 554 RILETRAL 561


>gi|121608774|ref|YP_996581.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553414|gb|ABM57563.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 381

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 128/358 (35%), Gaps = 25/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL      G       ++   +                A L    +++ +  S   +A
Sbjct: 39  FELLEELAQFGYIGGRLPQAEGGMDLDSLTWAMLMEEAGYAWLSLRTMLNITNGSIHKIA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   + +               P+  +       ++E   G++IA + ++     D
Sbjct: 99  AEGTPEQKERFL-------------QPLLASQRRCFTAISEPGTGSNIAQVQTRADLQGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +   +D  I++A+         +   L + + +    +R+ + +  RS
Sbjct: 146 HYVLNGRKLWISNGAFADFGIVVARTFSPDCQGQLSTFLVERAVSPYEMRRV-DTMVLRS 204

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL F          L    G ++ M        ++ A+ +V   + +L  +I YAR
Sbjct: 205 TGTAELGFDQVKVPRANLLGAEGGALKRMLAGLDGARVNIAMGAVGAAQAALDLSIDYAR 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    ++++ I D+ + + AA AL          A   +++A  A     I 
Sbjct: 265 TRSQFGRPIGSFQLVQKLIVDMTVRVQAARALG-----LRAAAALGTQDARMASC---IA 316

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K +  + A  V + A++  GG GY  +  I R +R++   +I  G+     L V   +
Sbjct: 317 KLYATEAAHEVASMALQVHGGLGYASDYPIERIFRDTRGGTIPEGTTEVQTLIVGREI 374


>gi|260778190|ref|ZP_05887083.1| acyl-CoA dehydrogenase domain protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606203|gb|EEX32488.1| acyl-CoA dehydrogenase domain protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 619

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 120/363 (33%), Gaps = 14/363 (3%)

Query: 102 AWHALLRRSIHDGLHCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           A H L   +         W+         R  +  I      L        L      S 
Sbjct: 19  AIHELENEASSGRFPRDKWEAIARTGIFERAVSSVIDKRESVLSTLYGLERLGEICKDSG 78

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
              ++ T          K  S+E        + K  +     ++E + G+D  ++T+  +
Sbjct: 79  LSFSVATHLASTITALNKFGSQELKHEFMESLVKGRLIGAHAISEPQAGSDALSMTTTAR 138

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +  D  Y L+GHK F+++  ++D  ++ A+         V   L D    G+   +   K
Sbjct: 139 EEGDD-YVLNGHKAFVTNGSIADVIVVYAKTSDSSTADCVSAFLVDTKTQGVRLGKEMEK 197

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---KILIYLDSAIMSVSGMRVSLAEA 335
           +G  ++   EL            +         +        L + +++V  M+  L   
Sbjct: 198 VGLHTSPLCELTLEECRVPKANMIGRRGAGFFVLSHVMQREILFAFMLNVGEMKRRLDRC 257

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y   RH     +     +   IAD+ +    +    + +A    + K  + E A    
Sbjct: 258 VSYVNSRHQFDSPIGSFQSVSNRIADMKIRYELSRQWLYHVAEKMIDNKDITSEVA---- 313

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              I K +  + A A   +A+   GG GY+           + +  I  G+ +     + 
Sbjct: 314 ---IAKVFVSENALATSVDALHIHGGYGYVASNGFGEEVCNALSGPIYSGTNDIQRGRIA 370

Query: 456 NLL 458
            +L
Sbjct: 371 AML 373


>gi|187251889|ref|YP_001876371.1| acyl-CoA dehydrogenase domain-containing protein [Elusimicrobium
           minutum Pei191]
 gi|186972049|gb|ACC99034.1| Acyl-CoA dehydrogenase domain protein [Elusimicrobium minutum
           Pei191]
          Length = 547

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 140/406 (34%), Gaps = 40/406 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+H  +    +  +        R         L     +  +   +  + +  T      
Sbjct: 53  GVHLLLIPIEYGGLAGSTTDIYRVCEELARIDLGIATSVFATFLGSDPLNVGGTEAQKAK 112

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ----KIS--DGIYC 227
           W  KI              K  + +  G TE   G+D+ ++ ++ +          G   
Sbjct: 113 WFGKI-------------AKEQLLVAYGATEADAGSDLVSLRTRAEHVLNPDGTLKGYKI 159

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
                W  +  ++D + +LA   G    F+V     + +  G      ++K G R + T 
Sbjct: 160 TGSKMWISNGGVADIYTVLAIAPGGPSWFIV-----EKNTPGFTSDAHEDKHGIRLSNTA 214

Query: 288 ELEFSNTFGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            L F + +  +               + +     L  A   +     +   AIHYA++R 
Sbjct: 215 GLSFDDVYVPVENLIGLKEGQGLLQAQAVFGYTRLMVAAFGLGAGEEATETAIHYAQQRI 274

Query: 344 VSGGILIDQPVMKRAIAD-IALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITK 401
            +GG L+D+      +     +   AA A     A   D+     + E A       I K
Sbjct: 275 QAGGPLVDKQGYMLKLITPHYIRFEAARAFIDNTAKMLDDNNHGFATEGA-------IAK 327

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEK 460
           Y+  +        A++ +GG GY +E S+ +  R+     I  G+   M + +     ++
Sbjct: 328 YYATEEGNNAAEHAIQALGGFGYTKEFSVEKIKRDVKITMIYEGTNEVMEMTIYRGRWQE 387

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506
                 Q +  +   L ++  K   +  DS++L    K LA+ L E
Sbjct: 388 HLKSRGQYYIDMAAQLEAAHAKNPNVGADSMALG--LKALAKVLEE 431


>gi|187477118|ref|YP_785142.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
 gi|115421704|emb|CAJ48215.1| acyl-CoA dehydrogenase [Bordetella avium 197N]
          Length = 390

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 104/288 (36%), Gaps = 17/288 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237
            S         P+   +       TE   G+D +A+ ++  +   G Y ++G K F++ +
Sbjct: 111 LSEHQRKDYLYPVVDGAKKFCFAQTEPDAGSDPSAMRTRAVRTEKG-YRINGVKRFITRA 169

Query: 238 PMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTF 295
             +D  +++A  +   G    +   + D    G+     +   +G+R     E+ F +  
Sbjct: 170 GQADFALVMAVTDPERGARGGISCFIVDMQTPGVRLAGAERTLMGDRPW---EIAFEDVD 226

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                L+G+        +       +     +       L     YA +R   G  L ++
Sbjct: 227 VPAENLVGEEGRGFALAQGYINHGRIRQGAHACGAAERCLGLTATYAGQRKTFGAPLSER 286

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++  +AD   ++ A   L +  A   D           A++   + K +  +M   V+
Sbjct: 287 QGVQWMLADGFTEVYATRLLVYDAARKADAGMD-------AKLETFMIKTFGVEMGFRVV 339

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
              ++  GG G  E+  I R +R+  +  I  G    +   +   + K
Sbjct: 340 DACLQMHGGMGLTEDSPIERFWRDLRSYRITEGPTEVLRTTLARQILK 387


>gi|300245939|gb|ADJ94027.1| putative aromatic-degrading BamM [Clostridia bacterium enrichment
           culture clone BF]
          Length = 405

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 102/299 (34%), Gaps = 28/299 (9%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      +               P  K        L+E   G+D   I +  +
Sbjct: 106 MPLVQWGTDEQKVKYLI-------------PAVKGQNIGAFALSESEAGSDAWNIKATAR 152

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           K  D         W     ++D F++ A+   ++ CF+V R     +  G+  Q L  K+
Sbjct: 153 KEGDHYVLNGIKDWVSLIDVADNFLVFARTGKKISCFIVER-----NFPGVETQSLSGKM 207

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
             R   T +L  +N       LLG+                   A  SV  +   L   +
Sbjct: 208 YIRVANTGQLLLNNVRVPRENLLGEEGEGKAVAASGMDNARFTVAAGSVGLIHGCLNACV 267

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R   G  + +  +++  I DI      A  L   +    +E +  + E A A+  
Sbjct: 268 KYAQTRKSFGQPIGNFQLIQSKIVDITTSTKIARFLVQNVGRLMNEGQFYTRETAMAKW- 326

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 +  K A    + A++  G + Y+ +  + R+ R +    I  G+   M + + 
Sbjct: 327 ------YATKKAFEAASHAIQIHGANAYLHDLPLERYLRNAKGAMIYTGTNEIMEIIIA 379


>gi|146343861|ref|YP_001208909.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146196667|emb|CAL80694.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 398

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 132/374 (35%), Gaps = 27/374 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGH 150
           +  D  +   A   L+R     GL  S             +  I  +R  L  A   A  
Sbjct: 39  DDVDHGDVDAACRGLVRALGAAGLLDSAVVAPDADAGAIDSRAICLSRETLAYADGLADF 98

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +     +  +AL  +  +     PK+ S E+                  L+EK  G+D
Sbjct: 99  AFAMQGLGSGAIALGGSEELRAGVLPKVRSGEW-------------LAAFALSEKEAGSD 145

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +AA+    ++  D         W  +  ++D + + A+     G   +   +     +G 
Sbjct: 146 VAAMACSARRDGDDYVLDGEKTWISNGGIADVYTLFARTGEAPGARGISAFVVYPDDSGF 205

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
                   I     AT  L   N    +   L     G    M+ L       A  ++  
Sbjct: 206 SVAERIEVIAPHPLAT--LRLENCRIPVSRRLGAPGGGFKLAMQTLDIFRASVAAAALGF 263

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SR 386
            R +L EA  +A+ R + GG L D  + + A  ++A D  AA  L++R A   D  K   
Sbjct: 264 GRRALDEAQAHAQSRQMFGGALADLQMTQAAFGEMATDTDAAALLTYRAAWRRDVQKLPT 323

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EAA A++ A        + A  VI  A++  GG G  +   +   YRE  A  I  G+
Sbjct: 324 TREAAMAKLTA-------TETAQRVIDRALQMFGGRGVRKGEIVEGLYREIRALRIYEGA 376

Query: 447 GNAMVLDVLNLLEK 460
                L V     K
Sbjct: 377 TEVQKLIVAREFLK 390


>gi|71398820|ref|XP_802653.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener]
 gi|70864406|gb|EAN81207.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi]
          Length = 238

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 22/250 (8%)

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            +K  DG Y L+G K ++++  ++D  ++ A+V+G+     +   + +    G       
Sbjct: 2   AKKWGDGKYVLNGCKTWITNGTVADVLLVYAKVDGK-----ITAFVVEKGTPGFTCGTKI 56

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335
           +K G RS+   +L F N     L   N+     + M  ++  L+   ++++ M + +A+ 
Sbjct: 57  DKCGMRSSQMCQLFFDNV---ELDKTNILGEEGKGMVGMMRNLEIERLTLAAMAIGIADR 113

Query: 336 I-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  YA  R   G  + +   ++R IA+   +  AA AL++ ++ S     S +   
Sbjct: 114 CVELMTRYASERQAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSV-SPTSNNRLG 172

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +   +A  V    M+ +GG GY  E  + R +R++    I  G+  A 
Sbjct: 173 SDA------AKLFAAPVAKRVADNTMQVMGGMGYSREMPVERLWRDAKLLEIGGGTIEAH 226

Query: 451 VLDVLNLLEK 460
             ++   L K
Sbjct: 227 QKNITKDLIK 236


>gi|284164204|ref|YP_003402483.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013859|gb|ADB59810.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 383

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 120/399 (30%), Gaps = 36/399 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +   A+E AR             P  + + +   +P    +L       L       
Sbjct: 13  ARDVKAEAREFARE---------HIEPNAQEYYQAGEYPE--EILEAGQEANLVAQDIPE 61

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +          +     +  A       +  +     M     T               
Sbjct: 62  EWGGRGFDLPQLLALTEEFYRADAGIALTLQLASFGCKMTVTYGTDDQ------------ 109

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +     GL ++E   G+D+A + +  +K  D         W  +   +D 
Sbjct: 110 -CERFIQPVAEGEQRSGLAVSEPDTGSDLAGMETTAEKDGDEYVLNGEKYWIGNGVEADW 168

Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
             + A+               +     +G   + +  K+  R++    +E  +       
Sbjct: 169 ITLYARTGDDESNPYGNYSLFIVPTDTDGYEAEHIPEKMAMRASKQAHIELEDCRIPAEN 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+       + D      +  +   +     ++     +   R   G  + D   ++ 
Sbjct: 229 LIGEEGEGFWMLADFFNHGRIAVSGHGLGLAAAAIESTWEFVHDREQFGQTISDFQAVQH 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD+ L+  +A +L++R        ++           A ++K    + A  V  + M+
Sbjct: 289 GLADMLLEFESARSLAWRACEKVQNGENEG-------YWAAVSKTKTTETATEVAEQGMQ 341

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG   ++ER IAR YR+     I  GS       +  
Sbjct: 342 FHGGRSVLDERRIARVYRDVRIPVIYEGSNEIQRNLIYG 380


>gi|268324154|emb|CBH37742.1| acyl-CoA dehydrogenase [uncultured archaeon]
          Length = 392

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 122/370 (32%), Gaps = 28/370 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
               + +F+P    L  +    G    +    +     K  ++   A     A +    +
Sbjct: 34  REIYERDFYP--RELYGKLGDAGFLAPVLPVEYGGRG-KLVYEAILADELGAACVPLAWI 90

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S S  + + +A          + P + S              +    + +TE   G+D+
Sbjct: 91  HSTSSYAYATIARYGNEEQKSIYLPAMKSG-------------AKIGAIAITEPGAGSDV 137

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGL 270
             I ++ ++  D        +   +   +D  ++ A     V     +   + +    G 
Sbjct: 138 MHIKTRAERNGDESLICGEKRNITNGSKADVLLVWAITSPEVDPARGMSVFIVESDTKGF 197

Query: 271 CYQRLKNKIGNR-SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             +R    +G         L F +       +LG  N     + D   +  +  A M V 
Sbjct: 198 EVKRDFKLLGGFPGTVNSYLRFDDVRIPGKNMLGGENEGARVMFDELSIERVLYAAMLVG 257

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R  L  A+ Y+R R   G  +     +   IAD+A  + AA  + +      D     
Sbjct: 258 EARPILELAVDYSRDRAQFGTAISRFEAISFKIADMATKLEAAKLMVYHTVRLIDAGFEA 317

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E+A A+++A    Y        V    ++ +GG G  +E      +R +  + I  G+
Sbjct: 318 EQESAMAKLLASEAFY-------EVAHNTVQILGGRGLTDEYPAEWAFRMARLSMIPAGT 370

Query: 447 GNAMVLDVLN 456
              M   V  
Sbjct: 371 NEIMRFIVQR 380


>gi|296107547|ref|YP_003619248.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
 gi|295649449|gb|ADG25296.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy]
          Length = 375

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 126/352 (35%), Gaps = 30/352 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             +G   +   + F      +         +        ++++     +  +    +   
Sbjct: 45  AQNGFLGASIPKQFGGQQWDELTIGIMHESFAKELCSLANILTVLGMVSKSLLQFGSKAQ 104

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + W P+I S E                 L LTE   G+D+  + +Q     D       
Sbjct: 105 KQIWLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGS 151

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K+     ++D F++LA  +G+     +  +L +   +GL    + N +G RSN   E+ 
Sbjct: 152 KKYITLGQIADLFLVLANCQGQ-----LTAVLVEKDTSGLIITPMSNFLGLRSNMLAEIF 206

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVS 345
           F N        L  S G   +  I   LD          V   +  L  A+ Y ++R   
Sbjct: 207 FDNCRIPKTNLLG-SIGIGFNCVIQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L +  ++++ I ++   + AA  L F         + R ++         I KY   
Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYA------GELRQQKNPAYIAETLIAKYAAS 319

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           KM   V   A++  G +G+ E   + R+YR++    I+ G+     + +  L
Sbjct: 320 KMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGTSQMHEILISKL 371


>gi|148258987|ref|YP_001243572.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146411160|gb|ABQ39666.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 398

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 131/379 (34%), Gaps = 27/379 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGH 150
           +  D  +   +   ++R     GL  S             +  I  +R  L  A   A  
Sbjct: 39  DEVDHGDVDASCRKIVRALGAAGLLDSAVVAPDADAAAIDSRAICLSRETLAYADGLADF 98

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +     +  +AL  +P +     PK+ + E+                  L+EK  G+D
Sbjct: 99  AFAMQGLGSGAIALGGSPALRAHVLPKVRAGEW-------------LAAFALSEKDAGSD 145

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           +AA+    +   D         W  +  ++D + + A+     G   +   +      G 
Sbjct: 146 VAAMACAARLDGDDYVIDGEKTWISNGGIADVYTLFARTGEAPGARGISAFVVYPDDPGF 205

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSG 327
                   I     AT  L   N        L     G    M+ L       A  ++  
Sbjct: 206 SVAERIEVIAPHPLAT--LRLRNCRIPASRRLGAPGGGFKLAMQTLDIFRASVAAAALGF 263

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SR 386
            R +L EA  +A+ R + GG L D  + + A  ++A D  AA  L++R A   D  K   
Sbjct: 264 GRRALDEAQAHAQTRRMFGGTLSDLQMTQAAFGEMATDTDAAALLTYRAAWRRDVQKLPT 323

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           + EAA A++ A        + A  VI  A++  GG G  +   +   YRE  A  I  G+
Sbjct: 324 TREAAMAKLAA-------TETAQRVIDRAVQMFGGRGVRKGEIVESLYREIRALRIYEGA 376

Query: 447 GNAMVLDVLNLLEKGTNLF 465
                L V    +K     
Sbjct: 377 TEVQKLIVAREFQKARAGL 395


>gi|118469597|ref|YP_888075.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170884|gb|ABK71780.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 411

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 115/313 (36%), Gaps = 34/313 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + + E                   +TE   G+D    + S  
Sbjct: 117 PTIQSRGTLAQQERWLPGLVTYE-------------KIGAWAITEPDSGSDAFGGMKSYV 163

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC----FLVPRLLEDGSPNGLCYQ 273
            +  D  Y L+G K F+++   +D  ++ A+++   G       V   + D    G    
Sbjct: 164 VRDGDD-YILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTFVLDKGMEGFVQS 222

Query: 274 RLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +   K+G  S+ T EL F+N                                +  A M++
Sbjct: 223 KPFRKMGIHSSRTGELFFNNVRLGRDRLLGETEDHGAGDGRDSARSSFSAERIGVAAMAL 282

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +   L  ++ YA+ R + G  +    +++  +A++ +       + FR+  S  E K 
Sbjct: 283 GVIEECLRLSVDYAKSRKLWGQEIGQFQLIQLKLANMEVARMNVRNMLFRVIESSQEGKP 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A   K++C + A  V  +A++  GG+GY+ E  + +  R++ +  I  G
Sbjct: 343 ISLA------EASAIKWYCSQAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMIYAG 396

Query: 446 SGNAMVLDVLNLL 458
           S    +  V   L
Sbjct: 397 SNEVQITHVARGL 409


>gi|120611541|ref|YP_971219.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120590005|gb|ABM33445.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 652

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/583 (16%), Positives = 191/583 (32%), Gaps = 108/583 (18%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          R + 
Sbjct: 27  TLDFLLHDWLDATALTQRERFADHSRETFDAVLDTCERIAREKYAPFNRLVDTEEPRMEG 86

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            +V    A H   R     G+  +  D +   +      +  A   +  A +  G  +  
Sbjct: 87  GRVVLPRATHEARRAYAESGMLSAAQDYAIGGMQLPYTLEAAANSFFAEASISIGSNL-L 145

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++ +  T    + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 146 TVGNANLLMVHGTEAQREVFALNEFNGRWSGT-------------MCLSEPQAGSSLSDI 192

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++     D          Y L+G+K ++SS   +       ++LA++ G          
Sbjct: 193 ATRAVPDGDDFESDPLGPRYRLAGNKMWISSGDHEMTENIVHLVLAKIPGPDGRPVPGVK 252

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS------------- 292
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 253 GISLFIVPKHLVDRSGQLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGTYPVRAGQGPG 312

Query: 293 -------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
                     G+ +G        +  M     +   + +          ++ YAR R   
Sbjct: 313 GLDGRGAGAIGYRVGVPGDGLKCMFHMMNEARIGIGMAATMLGLAGYRASLQYARDRTQ- 371

Query: 346 GGIL----------------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           G  +                      I+   ++R +         A AL+   A   DE 
Sbjct: 372 GRPIVPRSAAGDGKAGKDASAPPVRLIEHADIRRMLLAQKSYGEGALALNLYCARLVDEQ 431

Query: 384 KSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            + S EAA        ++ PI K W  +      + A++  GG GY  +  + +++R++ 
Sbjct: 432 HTGSPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQIHGGYGYTRDFPVEQYWRDNR 491

Query: 439 ANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL---------EQDLGSSGKKVITIL 487
            N I  G+     +D+L   ++ +G    + L   +           +L +   ++   L
Sbjct: 492 LNMIHEGTHGIQAMDLLGRKVVMEGGRGLQLLAGRVNATIQRAMERPELAAHANELARAL 551

Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
            +  +  K             ALA++   +  AG   +A ++L
Sbjct: 552 AEVGAATKAAWATGEPAE---ALANAVPYMQAAGHMVMAWIWL 591


>gi|115387195|ref|XP_001211103.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114195187|gb|EAU36887.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 616

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/504 (19%), Positives = 178/504 (35%), Gaps = 93/504 (18%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMANYNTP 82
            P     N   SD++   ++  +        V   L   G   +S         A    P
Sbjct: 17  VPPLP--NPADSDAVFQRILQWYLPSDVLSKVSPSLSRFGADAVSEQINGWIGNAETQQP 74

Query: 83  QLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            +      G R+D+  +     W  L +  + +G                          
Sbjct: 75  YVKGRNVWGSRYDRDRLITSEGWKQLGKWGLQNG-------------------------N 109

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMT-----TPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
           Y+ +   A +    S+TS +   +       +         ++ SRE             
Sbjct: 110 YIFSAASATYSCPVSMTSGACRLVRHHLSVPSDHPFHYLYARLTSREDP----------- 158

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQ------------KISDGIYCLSGHKWFLSSPMSDAF 243
                 +TE+ GG+D+    +               +I  G Y LSG K+F S+   +  
Sbjct: 159 WISAQWMTERVGGSDVRNSETIAVYSPLPSKEGRFGRIDQGDYLLSGFKFFSSATDCNVA 218

Query: 244 IMLAQVEG-RVGCFLVPRLL--------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++LA+ E  ++  F+ P +         E    NG+   RLKNK G +   T ELE  + 
Sbjct: 219 LILAKTESSQLSLFVAPTVKTIIGEDGKEKEVTNGIRIHRLKNKFGTKELPTAELELKDV 278

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              ++G  +     +  +  +    + I ++S +R ++  A  +AR R      L   P+
Sbjct: 279 RAHMIGPKDRGIATIALLLNVTRTHNFITALSCLRRAMDIAKAFARSRKTIDQPLWTFPM 338

Query: 355 MKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAY-------------ARIMAP 398
             R +A + +       L+F   +     D     +    Y              R +  
Sbjct: 339 HLRMLAQLEVKHRGWMQLAFFTTSLLSYGDHGFPANVSDHYSLLAKSPELTTLVLRALTS 398

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIE-----ERSIARHYRESPANSILLGSGNAMVLD 453
            +K   CK A     E  E +GG GY++     E +++R +R++ +NS+  G+ N +  +
Sbjct: 399 TSKAVICKSATLAFQECQEAMGGVGYMDEPEEPEFNVSRLWRDTASNSVWEGTSNVLASE 458

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLG 477
            +  L +G NL E   + +   +G
Sbjct: 459 TVRHLTRGHNL-ESFGTWIRDVIG 481


>gi|114567563|ref|YP_754717.1| hypothetical protein Swol_2052 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338498|gb|ABI69346.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 610

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/483 (18%), Positives = 180/483 (37%), Gaps = 70/483 (14%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVR 129
           +++   AN  + ++     GG   +K    P  +  +    I  G+     DR  E    
Sbjct: 53  RDVICPANKESDEIGMKHVGGN--EKAVISPDVFKTVYNTVIEAGMGPQFGDRQVEG-RM 109

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                     +   A      L   +  + +++    +  + + + PK++S E+      
Sbjct: 110 PLYWYAPILEMQTGASPAMVMLWCLTQGATTVLQYNLSKELQERFLPKMYSGEW------ 163

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDA-----F 243
                     + LTE   G+++ A++++       G++ + G K F+++   D       
Sbjct: 164 -------GGSMCLTEPGAGSEVGAVSTKCFPTDTPGLWKVKGQKCFITTGDWDGVDNIIH 216

Query: 244 IMLAQ------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF- 291
           ++LA+          + C +VP+   +     G+ N +    +++K+G   +AT  L F 
Sbjct: 217 LVLAKDPDAKPGTAGISCLVVPKFWVNEDGSMGAWNDVTTTGIEHKLGIHGSATCSLAFG 276

Query: 292 --SNTFGFLLGD-----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
              N +G+++GD            +  M     +++ I S+     +   A+ Y++ R  
Sbjct: 277 ENDNCYGWMIGDGPVDGRGQGMAQMFQMMNEERINTGIFSLGAFGAAYYAALEYSKARVQ 336

Query: 345 SGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYA 393
           S            +I+   ++R +      + A  AL +      D +K  +  EE  YA
Sbjct: 337 SKKSTDPKGPSVRIIEHEDVRRMLLLQKSVMEACRALLYSSYYYIDMSKEAATEEEREYA 396

Query: 394 RIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             M     P+ K +   MA  + AEA++  GG G++EE + A   R+    ++  G+   
Sbjct: 397 EDMFMIQNPLCKAYVSDMAWVMCAEAIQVHGGYGFMEEYAPASLARDCKIYTLWEGTNFI 456

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
              D                       G   KK +  + D I+  K  +  A F   + A
Sbjct: 457 QSQDFTG-------------RKFTMKKGEPFKKWLAEIGDFIANKKTPEFAAEFAMMEKA 503

Query: 510 LAS 512
            A+
Sbjct: 504 FAA 506


>gi|296169345|ref|ZP_06850972.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895994|gb|EFG75683.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 312

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 110/336 (32%), Gaps = 33/336 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             +  ELE L +      A E+A  +     Q H         D+        A+  R+ 
Sbjct: 6   PWLSPELEALRDLAAKFVATEIAPHSERFAEQHH--------VDR--------AVWERAG 49

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL C      +       AH+             +      S   A  +       + 
Sbjct: 50  ELGLLCMSMPVEYGGGGGTFAHEAVLLEEQARIGDSSWGAGLHSGIVAHYILHYAREDLK 109

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W PK+ S E             +   + +TE   G+D+ ++ ++     D        
Sbjct: 110 RQWLPKMASGE-------------LIGAIAMTEAGTGSDLQSVKTRAVLDGDEYVITGSK 156

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            +  +   +D  +++A+ +   G   +  ++ +    G    R+ +KIG R   T EL F
Sbjct: 157 TFITNGQQADLVVVVAKTDHTQGASGISLIVVEADRPGFRRGRVLSKIGQRGQDTSELFF 216

Query: 292 SNTFGFLLGDLN--VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     L      G  + M  L    L  A+ +V+ M ++L + I Y R+R   G 
Sbjct: 217 DGVRVPKTHLLGDTEGQGFFQLMTQLPQERLIVAVGAVAAMELALHQTIEYTRQREAFGR 276

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +      K  +A+ A +   A            + 
Sbjct: 277 TIFGFQNTKFTLAEAATETRIARVFLDHCICLHLDG 312


>gi|33591541|ref|NP_879185.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571183|emb|CAE40687.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332380941|gb|AEE65788.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 389

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 117/316 (37%), Gaps = 24/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +     +  ++LM +  + + + P             P+ +        L+E   
Sbjct: 94  ADFAFAMQGLGSGAISLMGSDALRQQYLP-------------PVARGEAIAAFALSEPEA 140

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA+  + +   DG        W  +  ++D + + A+     G   +   + D   
Sbjct: 141 GSDVAALACEARADGDGYVLNGEKTWISNGGIADFYCVFARTGEAPGARGISAFVVDAGT 200

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F++        L     G    M  L          +
Sbjct: 201 PGLEIAERIDLIAPH--PLARLRFADCRIPASRRLGEAGQGFKLAMMTLDIFRASVVAAA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E +  AR R + G  L D  + + A+ D+A  + A+  L++R A   D  +
Sbjct: 259 LGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDMATAVDASALLTYRAAWMRDVQE 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R+         A + K    + A AVI  A++  GG+G +   ++ R YRE  A  I  
Sbjct: 319 VRT------TREAAMAKMTATESAQAVIDRALQMFGGAGVVAGTTVERLYREIRALHIYE 372

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +   L K
Sbjct: 373 GATEVQKLIIARELLK 388


>gi|294912012|ref|XP_002778122.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239886243|gb|EER09917.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 433

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 136/382 (35%), Gaps = 18/382 (4%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K +  P    +  +    GL  S+      P     A    AA+         
Sbjct: 51  PNVSEWEKEKAIPM--EIYAKCYRAGLLPSL----VGPKGYDYADPAVAAKPQGFDYFHE 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEK 205
              +       S   +           P +    + E       P  +    I L +TE 
Sbjct: 105 LIFIDELCRCGSGGVMWGMMGGLNIGLPTVLNFGTSEMKARVAPPCVRGEKNICLCITEP 164

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A I +  +   DG  Y ++G K ++++ +   +  +A   G  G   +  LL +
Sbjct: 165 HAGSDVANIRTTAKLTPDGKHYIVNGQKKWITNGIFSDYFSVAVRTGGSGMKGISMLLVE 224

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL   RL +  G  S+ T  +EF +       L+G  N     +            
Sbjct: 225 RGMPGLKTTRL-DCQGVLSSGTTFVEFDDVKVPVENLIGKENDGFKVIMYNFNHERWGLI 283

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I +V   R+    +  YA++R   G  L++ PV++  +A+++  I   +     + +   
Sbjct: 284 IQAVRFSRILYELSFKYAQKRKTFGKTLMEHPVIRWKLAEMSRQIEGTSHWLESVTHQMS 343

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
                    A    +A + K    K+      EA +  GG+ Y +      + R YR+  
Sbjct: 344 TMPWVESMDALGGTIALM-KAHSTKVYEYCAREAAQIFGGNAYTKSGLGEVVERLYRDVR 402

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
           A +I  GS   ++   +   ++
Sbjct: 403 ALAIPGGSEEILLDLGIRQADR 424


>gi|94967641|ref|YP_589689.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549691|gb|ABF39615.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 392

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 104/312 (33%), Gaps = 25/312 (8%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +      W P              M K       GLTE   G+
Sbjct: 97  FVSVQSALVMYPIYTFGSDAQKDKWLP-------------AMAKGEKLGCFGLTEPDAGS 143

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + +A+ ++ +K  +         W  S  ++D  ++ A+VE   G   V   L +    G
Sbjct: 144 NPSAMRTRARKEGNDYIISGEKMWITSGSIADVAVIWAKVEDEGGR--VRGFLVETDRPG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              + +  K   R++ T  L   +        L  S G    +  L       A  ++  
Sbjct: 202 FVAKDVHGKWSLRASVTSSLSLQDVRIPAENLLPKSDGLKSPLMCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  A+ YA+ R       +    +++  +  +  +I  A  L+ ++    D+ K+ 
Sbjct: 262 AMACYDCALQYAQFRKQFHDMPIAGHQLVQEKLVWMITEITKAQLLALQVGRLKDQGKAG 321

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +  + A+            MA      A + +GG+G  +E  + RH     +     G+
Sbjct: 322 HQHISMAKR-------NNVWMALECARMARDILGGNGIADEYPVFRHMMNLESVKTYEGT 374

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 375 HDVHTLIIGQHI 386


>gi|261198997|ref|XP_002625900.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239595052|gb|EEQ77633.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 428

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/476 (19%), Positives = 156/476 (32%), Gaps = 78/476 (16%)

Query: 2   TLREIYRRL-------AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV 54
           T+R  +RRL       + N   + + S    N        N Y+ D L           +
Sbjct: 5   TVRHAFRRLHAANHFVSNNIPRRYAHSTATFNWQDPLGTTNLYTEDEL----------AI 54

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
                   +  L+    E  R  NY+                         ++R     G
Sbjct: 55  QDTARQYCQERLAPRILEAYRNENYD-----------------------KEIIREMGELG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L  +  D      V   A  +    +  +       +   S    + +    T      +
Sbjct: 92  LLGATIDGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLIMTGIYKFGTQAQKDKY 151

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK 232
            P +              K       GLTE   G+D +++ S  +      G Y +SG K
Sbjct: 152 LPDL-------------AKGKKLGCFGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSK 198

Query: 233 -WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVE 288
            W  +SP+SD F++ A+    G++  F++ R   D  P G L    +KNK   R++ T  
Sbjct: 199 TWITNSPISDYFLVWAKLETTGKIKGFIIER---DQCPPGTLETPAIKNKTALRASITGM 255

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRH 343
           ++  +             G V        L+SA + ++      +   +  A  YA  R 
Sbjct: 256 IQLDSCPVPEANMFPDVEGLV---GPFTCLNSARLGIAFGTMGALEDCIDRARTYALERK 312

Query: 344 VS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD A D A  T  + ++A   DE KS  E       M  I K 
Sbjct: 313 QFKGNPLAKYQLVQKKLADAATDAAYGTLAAVQVARLNDEGKSVPE-------MISIIKR 365

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             C  A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 366 QNCDRALVGARTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAM 421


>gi|302562667|ref|ZP_07315009.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302480285|gb|EFL43378.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 407

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 121/368 (32%), Gaps = 26/368 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            H   H  ++     GL   ++                A             +    + +
Sbjct: 60  THAFAHDSVQALARAGLMGLVFPAHLGGTDDSNVAYAVAMEEVTAGCAATSLVFMTQMHA 119

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  + L  +  + + + P +                SV   LG+TE   G+D+A++ +  
Sbjct: 120 AYPILLAGSDELARRYIPGLLDG-------------SVYGSLGITEPNAGSDVASLRTTA 166

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   DG        +  +   +   I  A V+  +G   +   + DG  +G+   R   K
Sbjct: 167 RPAGDGYLLNGAKTFITTGDRAGVIICFATVDKSLGRRGISAFVVDGGWDGVSSGRPFEK 226

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G   ++T EL F +     G LLG+       V +  +   + +A   V   R + A  
Sbjct: 227 MGMHGSSTAELFFDDVHIPAGHLLGEEGQGWRVVMNSVVKSRISAAAQGVGLARAAYART 286

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +    R H  G  L D+     A+A++   I     L   +A   D A            
Sbjct: 287 LAALTRLH--GARLPDE--HTFALAELRGRILQGRLLLHAVARQVDTATDIP------TG 336

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K  C  +      EA   +G  G +    + R  R++    I  G+     L + 
Sbjct: 337 QIGMMKQACTDLGFTAAVEATRILGPYGDLAPLGVERCLRDAKVTQIYDGTNEIQRLLIG 396

Query: 456 NLLEKGTN 463
             + +   
Sbjct: 397 REITRAMG 404


>gi|17505929|ref|NP_491942.1| Acyl CoA DeHydrogenase family member (acdh-5) [Caenorhabditis
           elegans]
 gi|1943792|gb|AAB52448.1| Hypothetical protein C37A2.3 [Caenorhabditis elegans]
          Length = 442

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 148/381 (38%), Gaps = 25/381 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P   +W++   +PA H + +     G+       +F       A     A      
Sbjct: 76  EKINPNVAKWEQDGRYPA-HLVFKMLGDHGVFGVNKPEAFGGTGTDIAMATAIAE----- 129

Query: 145 QLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             + G +   S+  + MV   M+TP + +  +  +           P     +   L ++
Sbjct: 130 --QMGAINCGSIPMSVMVQTDMSTPALAQFGSDAL-----RERFLRPSITGDLVSSLAVS 182

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           E   G+D++A+ +  ++    +       W  +   +D   +L               + 
Sbjct: 183 EPHAGSDVSAVHTHARRQGSDLIINGSKMWITNGGQADWACVLVNTSNTSNVHKNKSLVC 242

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
                 G+      +K+G RS+ TV+L F +      +++G+     G          L 
Sbjct: 243 VPLDAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFGYQMKQFNDERLV 302

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +  + +  ++  + E I YAR R + G  L+DQ  ++  +A++  ++ A  AL +R    
Sbjct: 303 TVAVGLLPLQKCIDETIEYARDRLLFGKTLLDQQYIQFQLAELEAELEATRALLYRTVL- 361

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              A+SR ++ +    +  + K    ++A A+  + ++  GG+GY+ E  I+R +R+   
Sbjct: 362 ---ARSRGDDVSM---LTAMAKLKIGRLARAITDQCLQVWGGAGYLNENGISRAFRDFRL 415

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
            SI  G    M+  +     +
Sbjct: 416 FSIGAGCDEVMMRIIHKAQSR 436


>gi|158521871|ref|YP_001529741.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510697|gb|ABW67664.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 423

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 142/401 (35%), Gaps = 35/401 (8%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYG-PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +++L+   +EL + A     +  +         +++ +       + +     L    + 
Sbjct: 3   DFLLTPEERELKKEARAFVREEISSDFLRAMDKNEITYP---REFVEKLAERNLIGVRFP 59

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIF 179
           +++    R        A L  +  L      + S+ S    AL    T    + +     
Sbjct: 60  KAYGG--RGLGWTAEIAVLEEIGCLGIALGCAYSMPSIVGEALHVFGTEEQKQKYL---- 113

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                     P  +  +     LTE RGG+D     ++     D        ++ + +  
Sbjct: 114 ---------VPYLQGKLIAAEALTEPRGGSDFFGAMTRADLEGDHFILNGQKRFVVGAEG 164

Query: 240 SDAFIMLAQV--EGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +D FI+  +   +     +  +  L+ D  P G+  + L   +G R   T  L F +   
Sbjct: 165 ADFFIVYCRTNFDANAHKYGRLSLLIVDKGP-GVEVEYLYGLMGCRGGGTGRLVFRDVKV 223

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               L+G+L+        M I   + SA  S+      L  A+ Y+ RR   G  +    
Sbjct: 224 PKENLIGELHSGALCFHQMMIPERMTSAGGSLCAWA-GLDLAVRYSNRRRAFGKEIRKYQ 282

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +   +AD  + + AA  L +  A + D            R +    K +  + A  ++ 
Sbjct: 283 AVNFLVADSIMQLDAARGLCYIAAKAVDNNYPN------LRRLVSEAKRFATESAWKIVN 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            AM+ +GG GY +   I R  R++    I  G+   M L +
Sbjct: 337 NAMQIMGGIGYTDVYPIERALRDTRLAMIWTGTNEIMNLLI 377


>gi|239983225|ref|ZP_04705749.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
 gi|291455056|ref|ZP_06594446.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
 gi|291358005|gb|EFE84907.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           albus J1074]
          Length = 380

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 75/360 (20%), Positives = 129/360 (35%), Gaps = 23/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R     GL    +   +          +    +     L     ++  V S   +A
Sbjct: 39  REIVRTLGRAGLLGLPYPAKYGGGGHDYETYLTVLEILATRWLAVAQSVNIHVLSCYPLA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W   +   E    N              ++E   G+DI+A+  +G+   D
Sbjct: 99  AHGTDEQRDRWLGSMLGGEQLGAN-------------CISEAEAGSDISAMACRGRAHPD 145

Query: 224 GI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L G K + S +  +D + +  +  GR G   +  LL   +  GL   R + K+G 
Sbjct: 146 GSAYTLDGAKAWTSHAGQADYYNIFCRT-GRAGVRGLSVLLAPATTRGLTTGRPERKMGV 204

Query: 282 RSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           RS+ T  +           ++G           +     L  A  +V     +L +A+ Y
Sbjct: 205 RSSPTATVTLDGAEVAADRMIGRPGKGFLIATGLFDRGRLGIAACAVGLATAALDQAVSY 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR+   SGG  ID   +   +AD++  +AAA AL    A + D     S         A 
Sbjct: 265 ARKPRSSGGPAIDSQGLAFLLADLSTQVAAARALVREAARTLDSGVRDSV----VTAEAA 320

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +    A  V  +AM+ +G     ++    R  RE+    I+ G+     + +   L
Sbjct: 321 RAKLFATDTAMRVTTDAMQALGAHSAGQDHPAERWMREAKLLQIIEGTNQIQRVVIARSL 380


>gi|76802659|ref|YP_330754.1| acyl-CoA dehydrogenase 10 [Natronomonas pharaonis DSM 2160]
 gi|76558524|emb|CAI50116.1| acyl-CoA dehydrogenase 10 [Natronomonas pharaonis DSM 2160]
          Length = 384

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 25/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L   +  GL        +          +  A  +  A       +  +   A ++ 
Sbjct: 43  WDVLEAGMDAGLVAQDISEEYGGRGLDLHEILAMAEEFYRADAGIALTLQLASFGAQILQ 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + +               P+ +     GL ++E   G+D+  + +  +K  D
Sbjct: 103 THGSDDQKETFL-------------RPVAENDQLTGLAVSEPDTGSDLTGMETTAEKDGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                    W  +   +D   + A+               +     +G   + +  K+G 
Sbjct: 150 EWVLNGEKYWVGNGVEADWVTLYARTGDNPDDPYGNFSLFVVPTDTDGYDAEHIPEKMGF 209

Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R++    +E +        L+G        + +      +      +     ++ E   +
Sbjct: 210 RASKQAHIELNGARIPEDHLIGVEGAGFYMLAEFFNHGRVVVGGHGLGLAAAAIEETADF 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +     ++  +AD+  +  AA  L+++ A       +R EE   A   A 
Sbjct: 270 VHDRTAFGRDVAGFQKVQHILADMMTEFQAARTLNWQAA-------TRVEENDNAGFWAA 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + K    + A       M+  GG   + +  I+R YR+     I  G+       +  
Sbjct: 323 MAKVKSTETANDCAERGMQLHGGRSVLTKNRISRVYRDVRIPVIYEGANEIQRNLIYG 380


>gi|330467509|ref|YP_004405252.1| acyl-CoA dehydrogenase [Verrucosispora maris AB-18-032]
 gi|328810480|gb|AEB44652.1| acyl-CoA dehydrogenase [Verrucosispora maris AB-18-032]
          Length = 390

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 122/407 (29%), Gaps = 70/407 (17%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QEL R    + P L                     L  ++   G       + +  +   
Sbjct: 29  QELLRRERAHQPGLEP--------------SELRELQLKAKKFGFWGLATPQEYGGMDLP 74

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                   +  +  ++    +       A  +    T    +++               P
Sbjct: 75  AVM-----QSLIWTEIGRTFVPFRFGGEADNILFYATEEQRQEFL-------------LP 116

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
                      +TE   G+D A I  + ++  D  + L+G K F++    +D  I++A  
Sbjct: 117 TIAGDRNSCFAITEPGAGSDAANIRFRARRDGDD-WILNGEKTFITGGNEADFAIVIAVT 175

Query: 250 EGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRS--NAT------VELEFSNTFGFLL 299
           +   G         L D S            +G RS    T        L F +      
Sbjct: 176 DPERGARNGGATAFLVDRS------------MGWRSEFIPTMGEGGPASLFFDDVRVPHR 223

Query: 300 GDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
             L            + ++          +V     +L  AI +A  R   G  +     
Sbjct: 224 NILGEEGQGF--ALAMQWIGKGRYTIPSHAVGIAERALRMAIDHANTRETFGTKIGTNQA 281

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  IAD   ++ AA  L  R A + D        ++ A       K +   M   V+  
Sbjct: 282 IQWMIADSETELEAARWLILRAAWTVDAGMDPRHASSMA-------KLYGAGMVNRVVDR 334

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            M+  GG GY  E  I R YR+     I  G+     L +   L +G
Sbjct: 335 VMQIHGGMGYTRELPIERWYRQVRLYRIFEGTDEMQRLIISRDLLRG 381


>gi|323528962|ref|YP_004231114.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385964|gb|ADX58054.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 405

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 67/316 (21%), Positives = 116/316 (36%), Gaps = 25/316 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 100 ADFALAMQGLGSGAISLGGTHEQKNRYLPRVAHG-------------TAIAAFALSEPEA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA++   ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 147 GSDVAAMSLAARENGDAYVLDGEKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADT 206

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            GL      + I         L F+         L     G    M+ L       A  S
Sbjct: 207 PGLEIAERIDVIAPH--PLARLHFAGARVPRSQMLGAPGEGFKLAMRTLDIFRTSVAAAS 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R ++AE I  A  R + G  L D  + +  +A +AL I ++  L +R A   D+ +
Sbjct: 265 LGFARHAMAEGIARAASRTMFGQTLADFQLTQAKLAQMALTIDSSALLVYRAAWLRDQGE 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  I  
Sbjct: 325 SVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGVAVEMLYREIRALRIYE 377

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L V   L K
Sbjct: 378 GATEVQQLIVGRDLLK 393


>gi|163795611|ref|ZP_02189577.1| enoyl-CoA hydratase [alpha proteobacterium BAL199]
 gi|159179210|gb|EDP63743.1| enoyl-CoA hydratase [alpha proteobacterium BAL199]
          Length = 386

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 123/336 (36%), Gaps = 23/336 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMV 162
              ++R    G         F  +       +     +  ++   A  +   SV     V
Sbjct: 40  KEWIKRYAEMGFLGINVAEEFGGLGLGNLEALIVLEEFAKVSPAVAFPIFESSVGPVRAV 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                  +     PK+ S               +   + ++E   GT +  + ++  +  
Sbjct: 100 EHFAGSALASQVVPKVCSG-------------DLVCAVAMSEPDAGTALTDLKTRAVEDG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D        +W      +DA+++  ++    G   +  L  +    G+ +   +  +G R
Sbjct: 147 DHFVLNGQKRWCSGGGHADAYVVYTKLSDAPGAKGIGALYVEKDMPGVSFGERERLMGFR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
              + ++ F +        +  + G  + M+   L    +A M ++  + +L + + Y +
Sbjct: 207 GIPSADIFFDDVRVPKANLIVPAGGFRQLMEAFDLERCGNATMCLAIAQSALDQVLAYVQ 266

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L++   ++  +A++A+ + A+  L +R A + ++      +++ A+      
Sbjct: 267 ERKAFGKELVEFQAVQMKLAEMAMRVEASRLLIWRAAKNAEDGLPSVLDSSLAKC----- 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             +  +M   V   A++ +G  GY +E  + +  R+
Sbjct: 322 --FANEMVRDVAGAALQVMGAYGYAKEYGMEQKLRD 355


>gi|300934204|ref|ZP_07149460.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100]
          Length = 394

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 122/374 (32%), Gaps = 40/374 (10%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L+       +     +    P      + +    +  +       +      +  
Sbjct: 53  PPTKDLMAHFGQLDVLGMHLEGYGCPGGSAVEYGLACMEIEAVDSGLRSMVSVQGSLAMF 112

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + + P++ + E             +    GLTE   G+D+A++    ++
Sbjct: 113 AIRHWGSEEQKEKYLPRLATGE-------------LVGCFGLTEPGAGSDVASMQMHAKR 159

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             +         W  +SP++D  ++  + E     F+V R         L    ++ K+ 
Sbjct: 160 EGNEWVLNGSKMWITNSPIADVLVVWTRTEDGHAGFIVER-----GTPDLNTPEIRRKLS 214

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSL 332
            R++ T E+   +        L  +N   GP      L  L+ A   +        R SL
Sbjct: 215 LRASITGEIVLDDCHISDAQRLPKVNSLRGP------LTCLNEARYGIIWGALGAARDSL 268

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + Y   R V G  L    + +  +AD+A+++  +  L+ +L    D  + R      
Sbjct: 269 QTTLEYTAERPVFGRPLSSFQLTQAKLADMAVELNKSMLLALQLGRLKDRGELRP----- 323

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                   K    ++A  +  E    +G +G   E S  RH     +     G+   M  
Sbjct: 324 --HHISAGKLNSTRVALDIARECRTLLGAAGITTEYSPMRHANNLESVLTYEGTAE-MHQ 380

Query: 453 DVLNLLEKGTNLFE 466
            ++     G   F 
Sbjct: 381 LIIGQAITGEAAFR 394


>gi|194382108|dbj|BAG58809.1| unnamed protein product [Homo sapiens]
          Length = 232

 Score =  200 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 19/234 (8%)

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            W  +   ++ + +LA+ +              + +    G+   R +  +G R + T  
Sbjct: 1   MWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRG 60

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRR 342
           + F +         NV  G     K+ +          A  +V   + +L EA  YA  R
Sbjct: 61  IVFEDVKVP---KENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALER 117

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G +L++   +   +A++A+ +  A     R A   D  +  +         A I K 
Sbjct: 118 KTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNT-------YYASIAKA 170

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +   +A  +  +A++ +GG+G+  E  + +  R++    I  G+     L V  
Sbjct: 171 FAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR 224


>gi|296804532|ref|XP_002843118.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238845720|gb|EEQ35382.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 425

 Score =  200 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 88/403 (21%), Positives = 150/403 (37%), Gaps = 44/403 (10%)

Query: 69  TAQELA--RMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           TA ELA    A      +L        R    ++ PA   +LR     GL  +  D    
Sbjct: 47  TADELAIQDTARRYCQERLMPRVLDAYR--NEDYDPA---ILREMGSLGLLGATIDGYGC 101

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
             V   A  +    +  +       +   S    + +    +  + +   P++       
Sbjct: 102 AGVSTVASGLITKEVERVDSGFRSGMSVQSSLIMTGIYEFGSEELKERLLPQL------- 154

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLSSPMSDA 242
                  +  +    GLTE   G+D  ++ +  +      G Y LSG K W  +SP+SDA
Sbjct: 155 ------AQGKLLGCFGLTEPNHGSDPGSMETTAKPHPTKKGYYSLSGTKTWITNSPISDA 208

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
           F++ A+++G++  F++ R   D  P G L    +KNK   R++ T  ++  N        
Sbjct: 209 FLVWAKLDGKIRGFVIER---DQCPPGTLSTPAIKNKTALRASITGMIQMDNCPVPEANM 265

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-GGILIDQPVM 355
               +G V        L+SA + ++      +   ++ A  YA  R    G  L    ++
Sbjct: 266 FPEVSGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLV 322

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           ++ +AD A D A  T  + ++A   DE K+  E       M  + K   C  A A     
Sbjct: 323 QKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGARTL 375

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  GG+   +E  I RH           G  +   L +   +
Sbjct: 376 QEIFGGNAASDEYHIGRHVANLFVAQTYEGQSDIHSLILGRAI 418


>gi|145592995|ref|YP_001157292.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302332|gb|ABP52914.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 386

 Score =  200 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 118/357 (33%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R     GL                A+ +    L          +      +   + 
Sbjct: 48  RELAREFGRLGLLGMHLTGYGCAGSSAVAYGLACLELEAGDSGVRSLVSVQGALAMYAIW 107

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E                   LTE   G+D A++T++ ++  D
Sbjct: 108 RYGSTEQKQHWLPAMAAGE-------------TIGCFALTEPDHGSDPASMTTRARRDGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++ ++D  ++ A+ +  V  F VP      S  G+  + ++ K+  R+
Sbjct: 155 DWVLHGTKMWITNATIADVAVIWARTDEGVRGFAVPT-----STPGVAVREIRRKMSLRA 209

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          ++   R  L   + YA  
Sbjct: 210 SVTGEISLDDVRLPAAARLPDAVGLKAPLGCLTEARHGIVWGALGAARDCLETTLEYAGS 269

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    + +  +AD+A++ +    L+ +L    D  + R ++         + K
Sbjct: 270 RTQFGRPLAGFQLTQAKLADMAVEWSKGYLLALQLGRLADAHRLRPDQ-------VSVGK 322

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  + RH     +     G+     L +   L
Sbjct: 323 LNNVREALAIARQCRTILGANGVSGEYPVLRHANNLESVLTYEGTSEIHQLVIGQRL 379


>gi|326381986|ref|ZP_08203679.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199412|gb|EGD56593.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 408

 Score =  200 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 128/352 (36%), Gaps = 38/352 (10%)

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSR 181
                  A+ +       MA +  G + S  V+     S +    T    K W P++ + 
Sbjct: 74  GGGSNNLANSMFLILNMEMAGVSLGLIASMGVSMGLTVSTIRSRGTLAQKKRWLPELVTM 133

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSP-M 239
           E                   +TE   G+D +  + +  ++  D  Y L G+K F+++   
Sbjct: 134 E-------------KVGAWAITEPDSGSDALGGMKTTVRRDGDD-YILKGNKTFITNGPY 179

Query: 240 SDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +D  ++ A+++   G  +    V   + D    GL   +   K+G  S+ T EL F N  
Sbjct: 180 ADTMVVFAKLDEGDGTPMRDRKVLTFVLDKGMEGLSQGKAFKKMGMMSSPTGELFFDNVR 239

Query: 296 GFLLGDLN---------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                 L                +       +  A +S+  +      +I YA+ R + G
Sbjct: 240 VSKDRLLGESEDTGSDKRGGDSAKAGFTAERIGIAALSLGIINECQRLSIDYAKTRTLWG 299

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +    +++  +A++ +       + F    +    K  +   A A  +      +  +
Sbjct: 300 QEIAKFQLIQLKLAEMEIARLNVQNMLFVAMEASKAGKPPTLAQASAMKL------YSSR 353

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A  V  EA++  GG+GY+ E  + +  R++ +  I  GS    V  V   L
Sbjct: 354 AATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEIQVTHVAKGL 405


>gi|254820013|ref|ZP_05225014.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950]
          Length = 387

 Score =  200 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 123/361 (34%), Gaps = 29/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
           AL  ++   GL        +         ++  A      ++ A      +   +   + 
Sbjct: 51  ALQAKAREAGLWSLQTPEEYGGAGLSVLGQVVVAEEAAKCRMGAFFPALGAFGGNPPNIM 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKIS 222
              TP   + +A  +                       +TE  GG+D A AI  +  +  
Sbjct: 111 FKATPEQFEKYARPVIDGIMSKAYT------------AITEASGGSDPARAIKLKATRDG 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W   +P +D  ++ A+     G   +   + +    G+ + R+       
Sbjct: 159 SSYLLNGSKMWISHAPDADWGVVYART--GEGRHGISAFILEKGTPGVTFSRIPV---MA 213

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S A  EL F N       L+G+         +  +   +  A   +   + +L  A  +A
Sbjct: 214 SFAPYELHFDNVRLPTEQLIGEEGQGFSLAGEFLVHGRIVYAAGPIGIAQSALDMACRWA 273

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V GG L D+  ++  + D  +D+ AA  L ++ A++ D  +    +       A +
Sbjct: 274 RDRDVFGGRLADKQGIQWMLVDSEVDLRAARLLMYQAASNADLGRDVRVD-------ASV 326

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  + A  V+   ++  G  G   E  + R +R+     +  G+       +   L 
Sbjct: 327 AKMFGTEAAYRVLDRCIQIHGALGISTELPLERWFRDLRVKRLGEGATEVQREIIARSLV 386

Query: 460 K 460
           +
Sbjct: 387 R 387


>gi|262195839|ref|YP_003267048.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079186|gb|ACY15155.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 431

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 112/311 (36%), Gaps = 29/311 (9%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           +   +    T    + W               P+         G+TE   G+D   A+ +
Sbjct: 136 AGGAIMRRGTEAQKRRWG-------------LPILCFDKIGAWGMTEPGAGSDAFRAMRT 182

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCY 272
                 DG        +  ++P +D  ++ A+++   G  L    +   + +    GL  
Sbjct: 183 VAVPEGDGYILNGQKTFITNAPYADVLVVYAKIDRGDGIPLAERAIEAFVLERDDPGLSL 242

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-----STGPVEDMKILIYLDSAIMSVSG 327
            R   K+G  ++ T E+  ++        L +           D+        A M V  
Sbjct: 243 SRPMRKMGMHASPTGEIFLADCRVPGDRLLGMHERAQGRASGRDVFHAERTSMAPMCVGI 302

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +   L  A  YAR R   G  +    +++  +A + + +    AL F+          RS
Sbjct: 303 IERCLEIASEYARERVTWGRPIAGYQLVQDKLARMFMHLQNVEALMFKQLWL------RS 356

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           ++ + +   A  TK +  + A     EA++ +GG+GY+ E  +    R++    I  G+ 
Sbjct: 357 QKRSMSPAEASATKLYAARAATECALEAIQLLGGNGYMREYRVEMLMRDAKLLQIGGGTD 416

Query: 448 NAMVLDVLNLL 458
               L++   L
Sbjct: 417 EIQTLNIARHL 427


>gi|315506649|ref|YP_004085536.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315413268|gb|ADU11385.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 390

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 127/408 (31%), Gaps = 72/408 (17%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           QEL R    + P L               H     L  ++   G         +  +   
Sbjct: 29  QELLRRERVHRPGLE--------------HSELRELQLKARKFGFWGLATLEEYGGMDLP 74

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                   +  +  +L    +       A  +         +++               P
Sbjct: 75  -----AVTQSLIWTELGRSFVPFRFGGEADNILFHANDEQKREYL-------------VP 116

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249
             +        +TE   G+D A I    ++  D  + L+G K F++    +D  I++A  
Sbjct: 117 TIEGERRSCFAITEPGAGSDAANIKLSARRDGDD-WILNGEKTFITGGHDADFAIVIAVT 175

Query: 250 EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRS---NATVE-----LEFSNTFGFLL 299
           +   G         L D S            +G RS       E     L F +      
Sbjct: 176 DREKGARHGGATAFLVDRS------------MGWRSEFIQTMGEGGPASLVFDDVRVP-- 221

Query: 300 GDLNVSTGPVEDM-KILIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              N+   P +     + ++          ++     +L+ AI YA  R   G  +    
Sbjct: 222 -GRNILGEPGQGFSLGMEWIGKGRYIIPSHALGIAERALSMAIDYANTRETFGAKIGTNQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD   ++ AA  L  R A + +++      ++ A       K +   M   V+ 
Sbjct: 281 AIQWMIADSETELEAARWLILRAAWTVEQSMDPRHASSMA-------KLYGAGMVNRVVD 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             ++  GG GY  E  I R YR+     I  G+     L +   L +G
Sbjct: 334 RVLQIHGGMGYTRELPIERWYRQVRLYRIFEGTDEMQRLIISRDLLRG 381


>gi|84495430|ref|ZP_00994549.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384923|gb|EAQ00803.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 625

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/535 (16%), Positives = 180/535 (33%), Gaps = 80/535 (14%)

Query: 32  IGMNAYSS----DSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           I  N +      D L     A+  S   +E+      +      E  + A+ N P    Y
Sbjct: 11  IEFNLFEVLGRHDVLGHGPYADLDSDTAREMLKEMARLSENEIAESFQDADRNPPV---Y 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P       V    ++    +     G          +  V   +  +R A   L+    
Sbjct: 68  DP---ETQVVTMPESFKKSYKAYRDSGFWGIDLPAELDGTVAPPS--LRWAMNELVLGAN 122

Query: 148 AGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
              LM + S   A ++ ++      K                  + +      + LTE  
Sbjct: 123 PALLMFNASYGFAKLLHILGNDEQKK--------------LARWIAEKDWHCTMVLTEPD 168

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG-RVGCFLVPR 260
            G+D+ A  ++  +  DG + ++G K F++S  SD        +LA+ EG   G   +  
Sbjct: 169 AGSDVGAGRTKATQNEDGTWDITGVKRFITSAESDMVDNVVHFVLARPEGAGPGTKGLSL 228

Query: 261 LL-----------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306
            +           E G  NG+    ++ K+G + + T EL F       G LLGD++   
Sbjct: 229 FILTKYAVDLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGGEKAATGTLLGDVHDGI 288

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPV 354
             +  +     +     +++ +      A+ YA+ R                  +   P 
Sbjct: 289 AQMFRVIENARMLVGTKAIATLSTGYLNALEYAKERVQGADLTQQTDKAAPRVTITHHPD 348

Query: 355 MKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEAAYARI-------MAPI 399
           ++R++           AL    A   D              E  + A         + PI
Sbjct: 349 VRRSLMLQKAYAEGLRALVLYTAAQQDIVDSAQLESGAETLEHGSPAEQANRVNDLLLPI 408

Query: 400 TKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD----- 453
            K    + A  ++  E+++  GGSG++++  + ++ R++  +++  G+     LD     
Sbjct: 409 VKGLGSERAWVLLGTESLQTFGGSGFLQDYPVEQYVRDAKIDTLYEGTTAIQGLDFFFRK 468

Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508
           ++    +             +DLG  G K+           +  +G+  ++  ++
Sbjct: 469 IIKDKAQALTTLAMQIQEFAKDLGGHGGKLDRERELLGEGLENVQGILGYMVGEL 523


>gi|226362039|ref|YP_002779817.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240524|dbj|BAH50872.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 397

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 120/364 (32%), Gaps = 30/364 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH---LMSPSVTSASM 161
            L+ R    GL      R++  +  +   + +    +   +    +     +     +  
Sbjct: 42  RLVERMAALGLFGISIPRAYGGL--EWTMEQQVQLTFEFTRASCVYRSRFSTVIGLCSQA 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    +   P + + E             +     LTE+  G+D A + +  ++ 
Sbjct: 100 ILDHGTEEQRRRMLPAMAAGE-------------LVTAFALTEEHAGSDAAHLRTTAERR 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            D        ++  ++  +DAF++ A+ +    G   V  L+ D +  G+         G
Sbjct: 147 GDVFVLNGSKRYITNAAWADAFLVFARTDASDPGAGGVSALIVDAASPGVRTVLPTIMNG 206

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----ILIYLDSAIMSVSGMRVSLAEAI 336
           +      E+ F +        L    G    M         L  A   V      L E  
Sbjct: 207 HAEAPVGEIYFDDVEVPAENLLGGVEGQGLTMALRGINHARLHVAATCVGQATRMLEETT 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +   R   G  L +   ++  + +   ++ A  AL+   A SFD  +         R  
Sbjct: 267 AHVNGRKQFGAPLAELGAVQATLGESFAELEAGRALAIDSARSFDGGE-------IPRHR 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K +  +MA  V    ++ +GG G +    + R +R+  A  I  GS      ++  
Sbjct: 320 IAAAKLYNSEMASRVADRCVQLLGGEGIVGPHPVPRMWRDVRALRIYEGSSPVHQRNLAK 379

Query: 457 LLEK 460
            + +
Sbjct: 380 AMIR 383


>gi|292653655|ref|YP_003533553.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
 gi|291369501|gb|ADE01729.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2]
          Length = 381

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 114/354 (32%), Gaps = 24/354 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++  +  + L        +    R  +  + AA  +  A    G  +        ++  
Sbjct: 44  DIVEAAREEELVAQEISTEYGGAGRSLSEAVAAAEEFFRADAGIGLALMGQSFGTGILEQ 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP   + +   +              +     G+ ++E   G+D+A + +   +  D 
Sbjct: 104 FGTPHQKETYLRSV-------------AEGDAITGMAISEPETGSDLAGMETTAVRDGDE 150

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W  +   +D  ++  + E           ++     +G   + +  KIG  +
Sbjct: 151 WVLNGEKYWIGNGVEADWILVYVRTEESDKPHDNHSMVIVPTDSDGYDAEHVPEKIGMHA 210

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +    + F++       L+G+       V +         A   +     ++ EA  +  
Sbjct: 211 SKQSHITFTDCRVPHENLVGERGNGFRMVAEFFNHGRTRVAAQGIGLAAAAIEEAWEFVH 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG + D   ++  +A +     +A  L +      +  +  ++ ++ A++ A   
Sbjct: 271 EREEFGGPVSDFQSVRHDLAQMRTKFESARTLLWHTVERMESGEDAAKWSSMAKLHA--- 327

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                + A      A+   GG G  +E  I R YR+     I  G        +
Sbjct: 328 ----TETAAECAETAIRLHGGHGLFDESRIGRVYRDVRMPLIYEGVSEIQRDII 377


>gi|55378059|ref|YP_135909.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55230784|gb|AAV46203.1| acyl-coA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 393

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 126/397 (31%), Gaps = 42/397 (10%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
             A+E A  A +  P    Y   GE  WD          +L  +   GL        +  
Sbjct: 27  EEAREFA--AEHIEPVAGEYYASGEYPWD----------VLEAATEAGLVAQDIGEEWGG 74

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                   +  A     A       +  +   A +V         +++            
Sbjct: 75  SGYDLQQMLAMAEELYKADAGIALTIQLASFGAEIVEDHGADWQKEEFLK---------- 124

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
              P+       GL ++E   G+D+A +T+  +K  D         W  +   +D   + 
Sbjct: 125 ---PVAAGDQLTGLAVSEPETGSDLAGMTTAAEKDGDEWVINGEKYWIGNGVEADWVTLY 181

Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           A+   +           +     +G   + +  K+G R++    +   +        + V
Sbjct: 182 AKTGDDPNDRYGNYSMFIVPTDADGYHAEHIPEKMGFRASKQAHIVLDDCRIPEENLVGV 241

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359
                    +  + +   + V G  + LA A       +   R   G  + +   ++  +
Sbjct: 242 EGAGF--YMLAEFFNHGRVVVGGHGLGLAAAAIEEAWEFVHDREAFGKTVDEFQAVQHKL 299

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+ L + +A  L++  A      ++    AA A+  A        + A     + M+  
Sbjct: 300 ADMQLSLQSARTLTWHAAERVANQENSGYWAALAKTNA-------TEAAMDCAEKGMQLH 352

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG   + E  I+R YR+     I  G+ +     +  
Sbjct: 353 GGRSVLTENRISRVYRDVRIPVIYEGANDIQRNLIYK 389


>gi|71002638|ref|XP_756000.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66853638|gb|EAL93962.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|159130054|gb|EDP55168.1| acyl-CoA dehydrogenase [Aspergillus fumigatus A1163]
          Length = 437

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 123/332 (37%), Gaps = 24/332 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +A   TP   + W PK+              +  +   LG+TE   G
Sbjct: 120 WGLGGGNSIGCPPIARFGTPEQRRRWLPKV-------------ARGDIRFCLGITEPDAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  +   D        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 167 SDVANIQTTARLDGDHYVVNGAKKW-ITNGIWADYCTAAVRTGGPGRNGISLLVIPLTAP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  L+F +       L+G  N     +        L  A  ++
Sbjct: 226 GVTRRRMHNS-GVNASGSTFLQFEDVRVPADNLIGKENKGFPIIMSNFNPERLTLACAAL 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A HYA +R   G  LI +  ++  I    L I  A A   +L N  +  K 
Sbjct: 285 RLARVCAEDAFHYAVQRETFGAPLIQRQAIQSKIFRFGLMIEPAYAFMEQLVNIIELTKD 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
           R  +      M  + K    +     + EA + +GG+GY        I +  R+   + +
Sbjct: 345 RPADDVKIGGMTALLKVMSTRALEKSVREAQQILGGAGYNKSGRGARIEQISRDVRVHVV 404

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
             GS   M   +   L++ T   +     LE+
Sbjct: 405 GGGSEEIM---MGLALQEETKALKTRRQALEK 433


>gi|327306175|ref|XP_003237779.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326460777|gb|EGD86230.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 385

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 23/292 (7%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           +  S E        + +  +    GLTE   G+D  ++ +  +      G Y LSG K W
Sbjct: 100 EFGSEELKQRLLPQLAQGKLLGCFGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTW 159

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFS 292
             +SP+SDAF++ A+++G++  F+V R   D  P G L    +KNK   R++ T  ++  
Sbjct: 160 ITNSPISDAFLVWAKLDGKIRGFVVER---DQCPEGTLRTPAIKNKTALRASITGMIQMD 216

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
           N            TG V        L+SA + ++      +   ++ A  YA  R    G
Sbjct: 217 NCPVPETNMFPEVTGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++A   DE K+  E       M  + K   C 
Sbjct: 274 NPLAKYQLVQKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCD 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A      E  GG+   +E  I RH           G  +   L +   +
Sbjct: 327 RALAGSRTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLILGRAI 378


>gi|296140199|ref|YP_003647442.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028333|gb|ADG79103.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 407

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 127/335 (37%), Gaps = 35/335 (10%)

Query: 143 MAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
           MA +  G + S  V+     S +    T    K W P++ + E                 
Sbjct: 91  MAGVSLGLIGSMGVSMGLTVSTIKSRGTLAQKKRWLPELVTME-------------KVGA 137

Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257
             +TE   G+D +  + +  ++   G Y LSG K F+++   +D  ++ A+++   G  L
Sbjct: 138 WAITEPDSGSDALGGMKTTVRRDGAGGYILSGQKTFITNGPYADTIVVFAKLDEGDGTPL 197

Query: 258 VPR----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVST 306
             R     + D    GL   +   K+G  S+ T EL F           G          
Sbjct: 198 RERKVLTFVLDKGMEGLTQGKAFKKMGMMSSPTGELFFDQVALGPDRLLGETEETPGGGG 257

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +       +  A +++  +  +   +I YAR R + G  +    +++  +A++ +  
Sbjct: 258 ASAKAGFTAERIGIAALALGIINEAQRLSIDYARTRTLWGQEIGTFQLIQLKLAEMEVAR 317

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                + F    +    K  +   A A  +      +  + A  V  EA++  GG+GY+ 
Sbjct: 318 INVQNMLFTAIEASRAGKPPTLAQASAMKL------YSSRAATEVAMEAVQLFGGNGYMA 371

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           E  + +  R++ +  I  GS    +  V   L +G
Sbjct: 372 EYRVEQLARDAKSLMIYAGSNEIQMTHVAKGLLRG 406


>gi|332286696|ref|YP_004418607.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330430649|gb|AEC21983.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 380

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 139/373 (37%), Gaps = 31/373 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGH 150
           E  ++ E  P    + +R    GL    +          +    I    L   +Q  A  
Sbjct: 29  EDAEEQERFP--RHVFQRWGELGLIGVRYPEESGGSGLDKISDCIVREELSYFSQAFATS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + S      +  + T +    +               P  +     G GL+E  GG++
Sbjct: 87  WSAHSHLGIWPIWKVGTEQQKTRFLE-------------PAMRGEKISGFGLSEPDGGSN 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           I A+T++ +K+  G        +  ++P +D  ++ A+    +    +   + +    G 
Sbjct: 134 IRAMTTKAEKVDGGWKLRGAKLYITNAPFADFLLVAARTSPELTPDAISLFIVELPNAGF 193

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +LK K G R++ T  +   + F      L   TG      IL  L    + V+   +
Sbjct: 194 EIHKLK-KEGIRASETGLIHIDDAFVPDDCLLGEVTG--SYPVILECLSENRVGVAANAL 250

Query: 331 SLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A A   A       R V+G  + D   +   +AD++ +I AA  L +  A   D+   
Sbjct: 251 GMARAALDAARAYADERIVAGKRIGDYQAIAHRLADMSANIEAAKWLVYYGAWRVDQGTL 310

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S  AA  +++A        + A     +A+  +GG+G + E S+ R +R++    I  G
Sbjct: 311 DSATAAKVKLIA-------TETAVQTSEQAIRILGGAGIMREYSVGRIHRDALVYVIGEG 363

Query: 446 SGNAMVLDVLNLL 458
           + +     +   +
Sbjct: 364 TSDIQRNLIARDM 376


>gi|312115673|ref|YP_004013269.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220802|gb|ADP72170.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 557

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 136/367 (37%), Gaps = 37/367 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        F  +   +      +       +  G L + S  +A ++    T    
Sbjct: 213 ELGVFGLTIPEEFGGLGLGKEAMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTQEQK 272

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           ++W PK+ S E  PT                TE   G+D+A++ ++  +  D +Y ++G 
Sbjct: 273 EEWLPKLASGEVLPTAV-------------FTEPNTGSDLASLKTRAVRDGD-VYKITGQ 318

Query: 232 KWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSPN---------GLCYQRLKNKIG 280
           K +++ P+ +D   +L +      G   +   L +             G+    ++  +G
Sbjct: 319 KTWITHPVRADLMTVLTRTNPAEPGYKGLSMFLAEKPRGTDANPFPAVGMSGGEIE-VLG 377

Query: 281 NRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
            R     EL F         L       G  + M+      + +A  +V   + ++  A+
Sbjct: 378 YRGMKEYELSFDEFEVPVSGLLGGEEGQGFKQLMQTFESARVQTAARAVGVAQSAMDLAL 437

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  LI  P +   IA +A +   A  L++  A   D  +    EA  A+++
Sbjct: 438 RYATERVQFGKTLIKFPRVSDKIAMMAAETMIARQLTYFAAREKDGGRRCDLEAGMAKLL 497

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A A    A++  GG+G+  E  ++R   ++   +I  G+       +  
Sbjct: 498 -------GARVAWAAADNALQIHGGNGFALEYPVSRVLCDARILNIFEGAAEIQAQVIAR 550

Query: 457 LLEKGTN 463
            L +  N
Sbjct: 551 RLLEQRN 557


>gi|320105221|ref|YP_004180812.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319752503|gb|ADV64263.1| acyl-CoA dehydrogenase domain-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 653

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 119/392 (30%), Gaps = 33/392 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HL 151
           R D+    P   +++      G+               Q+   R   +           +
Sbjct: 112 RIDREADIP--RSVIEGLGRVGVLGMTAPVEVGGRGLSQSGYCRVMEVIGGHCASTSVFV 169

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +        + L  T      W P +   E                   LTE   G+D 
Sbjct: 170 NAHHSIGIRALLLFGTEEQKSRWLPGLVRGE-------------KLAAFALTEPEAGSDA 216

Query: 212 AAITSQGQK----ISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGS 266
             + +  +                ++  +  ++D   ++A+  + + G   +   L    
Sbjct: 217 GNVQTTAEPIQTEEGPAYQLNGQKRYITNGGIADVLTVMARTPDPKGGESKITAFLVTPD 276

Query: 267 PNGLCY-QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
             G    +  K K G R  AT  L F+        +LG +         +          
Sbjct: 277 LPGFRVLEERKPKCGIRGTATGALAFNEMIVPASNVLGPVGKGLRVALTVLDFGRTTFGA 336

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                 +V L  A+ +A  R   G  L    ++K+ IA IA    A  A +   A   D 
Sbjct: 337 CCTGVAKVCLKAAVRHASTRRQFGKTLGSFELVKKKIAFIAAHTYAMEATTRHAAALIDS 396

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  A    +   I K +  ++   ++ E ++  GG GY  +    R  R++  N+I
Sbjct: 397 G------AEDYMLETGILKVFATEVLWDIVYETLQIHGGQGYFNDEPYERMMRDARINTI 450

Query: 443 LLGSGNAMV--LDVLNLLEKGTNLFEQLFSTL 472
             G+   +   L  L  +      FE +F   
Sbjct: 451 GEGANEVLKGYLIALAGMRDLGKEFEAVFRDF 482


>gi|294952947|ref|XP_002787527.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239902533|gb|EER19323.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 427

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 121/326 (37%), Gaps = 12/326 (3%)

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLG 201
                  +      AS   L       +   P +    +         P  +    I L 
Sbjct: 98  YFHELIFIDELARCASGGVLWGLIEGLQIGLPPVLNFATDALKKRVAPPCLRGEKKICLC 157

Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           +TE   G+D+A I +  +  +DG  Y +SG K ++++ +   +  +A   G VG   +  
Sbjct: 158 ITEPYAGSDVANIRTTAKLSADGKHYIVSGEKKWITNGIFADYFSVAVRTGGVGMKGISM 217

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           LL +    G+   R++ + G   + T  +EF++       L+G  N     +        
Sbjct: 218 LLIERDMPGVKTTRMECQ-GVWPSGTTFVEFNDVKVPVENLIGRENEGFRVIMYNFNHER 276

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 +    RV   E+  YA++R   G  L++ PV++  +A++A  I         + 
Sbjct: 277 WGFVAQAARLSRVLYEESFKYAQKRRTFGKTLMEHPVIRWKLAEMARQIEGVQYWLESVT 336

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHY 434
           +  +         A    +A + K    K+      EA +  GG+ Y        + R Y
Sbjct: 337 HQMNVMPWGESMTALGGTLALM-KAHSTKVFEYCAREAAQVFGGNAYTRSGLGEKVERLY 395

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           R+  A +I  GS   ++   +   ++
Sbjct: 396 RDVRAYAIPGGSEEILLDLGIRQADR 421


>gi|11498596|ref|NP_069824.1| glutaryl-CoA dehydrogenase (gcdH) [Archaeoglobus fulgidus DSM 4304]
 gi|2649607|gb|AAB90252.1| glutaryl-CoA dehydrogenase (gcdH) [Archaeoglobus fulgidus DSM 4304]
          Length = 395

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 130/374 (34%), Gaps = 36/374 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           +H L ++    G+  +     +  P +      +    +  +       +   S      
Sbjct: 49  FHELGKKFGELGMLGTFLPEEYGCPGMTYTTFGVVCQEVERVDSALRSFVAVTSGLVMYP 108

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +     ++ PK+   E             +    GLTE   G+D  ++ +  ++ 
Sbjct: 109 IWRYGSEEQKGEYLPKLARGE-------------IIGAFGLTEPNHGSDPGSMEATARRD 155

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
            D         W   + ++D  ++ A+   +G++  F+V R        G     +  K 
Sbjct: 156 GDEWVLNGTKTWISEADVADIAVVWARDVEDGKIKGFIVER-----GTKGFQQTAITKKA 210

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334
             R+ +  EL   N        L  + G       L  L+ A   +S   +  A      
Sbjct: 211 SMRAGSVGELGLVNCRVPEENRLPEARGLGA---PLSCLNQARFGISWGAIGAAMDCYET 267

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A++Y + R   G  L    +++  + ++ ++I     L++RLA   DE K+ +E+ + A+
Sbjct: 268 ALNYTKERKQFGAPLASYQLVQEKLVNMLIEITKGQLLAWRLAKLMDEGKATTEQISMAK 327

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                   +C + A        E +G +G   + S  RH     +     G+ +   L +
Sbjct: 328 KNNVRVARYCARTA-------RELLGANGISLDYSPIRHMANIESVYTYEGTDDIHTLIL 380

Query: 455 LNLLEKGTNLFEQL 468
              +        +L
Sbjct: 381 GRAITGYQAFRREL 394


>gi|313205826|ref|YP_004045003.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445142|gb|ADQ81497.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022779|gb|EFT35803.1| glutaryl-CoA dehydrogenase [Riemerella anatipestifer RA-YM]
 gi|325336735|gb|ADZ13009.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD]
          Length = 393

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 126/361 (34%), Gaps = 33/361 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSV 156
           + H     L+++    G   +   + +      Q ++ I    L              + 
Sbjct: 47  QTHKEIPNLMQQLGTIGALGAYIPKEYGGAGLDQISYGIIMQELERGDSAVRSAASVQAS 106

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    T    + + P + + E             +    GLTE   G++ + + +
Sbjct: 107 LVMYPIFEFGTEEQKRKFLPLLGAGE-------------ITGAFGLTEPNHGSNPSDMET 153

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           + + + D         W  ++P  D  I+ A+ E       +  L+ +    G       
Sbjct: 154 RIKDMGDYFLLNGAKMWITNAPTCDIAIVWAKDETNT----IRGLIVERGMEGFTTPETL 209

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334
           NK   R++ T EL F N         N+          L  L+SA   +S   +  A   
Sbjct: 210 NKWSLRASRTGELVFQNVKVP---KENLLPNVKGIKGPLSCLNSARYGISWGVIGAAIDC 266

Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA+ R   G  +    + ++ +A+   +I  A  LS+RL    +E K+   + +
Sbjct: 267 YCTAVQYAKERTQFGKPIGSFQLQQKKLAEFLTEITKAQLLSWRLGLLKNENKATPAQIS 326

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+           KMA  +  E+ + +G  G + +  + RH     +     G+ +  +
Sbjct: 327 MAKR-------NNVKMALDIARESRQILGAMGIMGDFPMMRHAANLESVITYEGTHDIHL 379

Query: 452 L 452
           L
Sbjct: 380 L 380


>gi|159042473|ref|YP_001541725.1| acyl-CoA dehydrogenase domain-containing protein [Caldivirga
           maquilingensis IC-167]
 gi|157921308|gb|ABW02735.1| acyl-CoA dehydrogenase domain protein [Caldivirga maquilingensis
           IC-167]
          Length = 379

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 126/367 (34%), Gaps = 36/367 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      GL   +    +         +     +  +A+          V  A ++ 
Sbjct: 39  RQLMGELGKQGLLAPMAPPEYGGGGLD--FRGEVIIIEEVAKHSPTLATLMEVQGALIID 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + +            SRE        + K  +     LTE   G+D  AI ++  K   
Sbjct: 97  SLLS----------HGSREVRERFLEGLVKGDLIASFALTEPCCGSDAGAIETRAVKDGG 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGCFLVPR-LLEDGSPNGLCYQRLK 276
                    W  S   +D +++ A+          +  FLVPR    + +P G+      
Sbjct: 147 EWVINGRKAWVTSGQYADLYLVFARTGSIEERHRAITAFLVPRGGCIEVNPMGV------ 200

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             +G R   T E+   +      + +G++N       +   L       + +     +  
Sbjct: 201 --MGIRGGGTAEVSLRDCRVPDEYRVGEVNRGFYLAMEKLNLGRTCVGAIGLGIAERAFT 258

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           EA  YA+ R + GG L +  V++  +A +   + A   L +  A   D+  S   + A A
Sbjct: 259 EAYDYAQVRRIYGGTLAELGVIQGYLAQMYTQVEALRGLIYLTAYMRDKGLSEFTKYAQA 318

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  KY     A  V   A++ +G  G   E  +   YR++ A  +  GS   ++  
Sbjct: 319 ------AKYLGSSTAVNVTRTAIQVMGAVGLSTESPLEYLYRDAKATEVYEGSNEVILYS 372

Query: 454 VLNLLEK 460
           +  +L K
Sbjct: 373 LFKMLRK 379


>gi|296167857|ref|ZP_06850040.1| glutaryl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896982|gb|EFG76605.1| glutaryl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 394

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 120/368 (32%), Gaps = 34/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     GL     +           + +    L          +      +   + 
Sbjct: 56  RELAKGFGQLGLLGMHLEGYGCGGASAVHYGLACVELEAADSGLRSMVSVQGSLAMFAIW 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E             +    GLTE   G+D AA+ ++ ++   
Sbjct: 116 NFGSEEQKRQWLPAMATGE-------------LLGCFGLTEPDAGSDPAAMKTRARRDGS 162

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A  +  +  F+VP      S  G     + +K+  R+
Sbjct: 163 DWVLNGRKMWITNGSVADVAVVWAATDDGIRGFVVPT-----STPGFSANTIHHKLSLRA 217

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHY 338
           + T EL   +        L  + G       L  L  A   +        R +   A+ Y
Sbjct: 218 SITSELVLDDVRLPADAMLPGAKGLR---GPLSCLSEARYGIIWGSMGAARSAWQAALDY 274

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    + +  + D+A+++     LS  L    D A  R E+ ++      
Sbjct: 275 ATQRTQFGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDGAGLRPEQVSFG----- 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +GG+G   E  + RH     +     G+   M   VL   
Sbjct: 330 --KLNNTREAIKICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPE-MHQLVLGQA 386

Query: 459 EKGTNLFE 466
             G++ F 
Sbjct: 387 FTGSDAFR 394


>gi|302341942|ref|YP_003806471.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301638555|gb|ADK83877.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 548

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 116/531 (21%), Positives = 183/531 (34%), Gaps = 54/531 (10%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY-----NTPQLHAY 87
           G N Y+ D  L   +          L+          +Q   +MA+        P L  Y
Sbjct: 21  GFNYYADDPFLQKALERHAGAEFPALDQALRRFDPLVSQRWRKMADEIARPDVLPVLQNY 80

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                R D++        L R     GL  +        V R           YL+ Q  
Sbjct: 81  DAHNRRIDRLVRPETTKILEREIFGQGLFAAATPPWLGMVKR-----------YLLHQNG 129

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              +M P   +  +VAL        +       R  D   +       V     ++E +G
Sbjct: 130 EFGVMCPIACTEGLVAL---ADQFPEGRHPAVQRILDHCKEGFDGDFGV-GAQFMSEIQG 185

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLL--- 262
           G+DI A   +     D  Y L G K+F S+  +D  ++ A+V G  + G F+VP  L   
Sbjct: 186 GSDIPANLLEAVPAGDH-YLLHGSKFFCSAMQADYAVVTAKVSGGEKPGAFIVPAWLPGD 244

Query: 263 -EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILIYLDS 320
            E    N     R+K K+G     T E+E+     + +G  +      V  +  L  L  
Sbjct: 245 KEREKRNACRINRIKWKMGTAELPTAEVEYDGAVAYAVGPTDRGVANAVGVVLTLSRLTV 304

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI----ALDIAAAT---ALS 373
              S + M  +  EA  Y++ R V G  +   P+    +  +        AAA     L 
Sbjct: 305 GFSSAAAMVRAAREAGLYSQFRDVFGQKICQTPLAAHQLRGMINTSRRTTAAAFKVFGLF 364

Query: 374 FRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
             L          +E  A        R +  I K      AP VI +AM   GG G IE+
Sbjct: 365 VSLGRRLQGGLDSNEPLAMRRKRFLLRELIIIQKLVTAFEAPEVIRQAMSIFGGHGVIED 424

Query: 428 R-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
             S+ R YR++  N +  G  N +++  L  L +    +       +   G+   +V  +
Sbjct: 425 FVSLPRLYRDAAVNELWEGPRNVLLMQALRDLLRVQGWYPAADFVADMLAGAQPARVAEL 484

Query: 487 LRDSISLCKE-------DKGLAR-----FLTEKIALASSAAALYRAGMNDI 525
             +      +        + +AR      L E++  A    AL   G   I
Sbjct: 485 AAELAGFMADPPAVEATAQSMARAAQWERLVEELFHAYQDQALAEIGPAPI 535


>gi|126740143|ref|ZP_01755833.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. SK209-2-6]
 gi|126718962|gb|EBA15674.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. SK209-2-6]
          Length = 386

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 122/366 (33%), Gaps = 26/366 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D  +   A  +L+      G        + E +  +    IR           A    +
Sbjct: 34  IDHSDTDAACRSLVAALGAGGWARHSGAETGEKLDVRSLCLIR--ETLARHDGLADFAFA 91

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   ++L  +     +W P   S                     LTE + G+D+A 
Sbjct: 92  MQGLGTGAISLFGSEAQQAEWLPLTRSG-------------KAISAFALTEPQSGSDVAN 138

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            T   ++  D         W  +  ++D + + A+     G   +   +      G    
Sbjct: 139 STMTARQEGDHYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFVVPAGLPGFEVV 198

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRV 330
             +  I     AT  L F++        L     G    M +L       A  ++   R 
Sbjct: 199 ERQEVIAPHPLAT--LRFTDCRIPASAMLGAPGHGFKIAMSVLDVFRSTVAAAALGFARR 256

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L E +     R V G  L +  +++  IAD+ALD+ AA  L +R A + D        A
Sbjct: 257 ALDETLARVSSRTVQGAPLFELQMVQGHIADMALDVDAAALLVYRAAWAKDSG------A 310

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A     A + K +    A  VI +A++  GG G    + +   YR+  A  I  G+ +  
Sbjct: 311 ARVTREAAMAKLFSTDQAQQVIDKAVQLHGGDGVRRGQKVEELYRDIRALRIYEGASDVQ 370

Query: 451 VLDVLN 456
            + +  
Sbjct: 371 RVVIAR 376


>gi|283834091|ref|ZP_06353832.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|291070237|gb|EFE08346.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 381

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 62/322 (19%), Positives = 117/322 (36%), Gaps = 14/322 (4%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A +    L+   +      A + T         +  + E              A  L  T
Sbjct: 65  ADMMTQVLVLEEIARMGAPAYIMTEGQCIHNMQRFGNAEQLAKTAEVGLTGIPAYSLAFT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEGRVGCFLVPRL 261
           E + G+D   + +   +  +G   L+G K F++        ++LA+  E           
Sbjct: 125 EPQAGSDNNRVATTYTRK-NGKVYLNGQKTFITGAKDYPYMLVLARNPEPEDPKRCFTLW 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYL 318
             D +  G+    L +KIG    +  E+   N        +     G +  M+      +
Sbjct: 184 WVDPNMPGVKRNSL-HKIGWHMVSNCEVFLDNVELEESAMVGREGYGFIHMMENFDIERI 242

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+     +  +A  YA +R      +    +++  +  +A+ I     + +R A 
Sbjct: 243 VIAAHSLGVAECAFEDAARYANQRIQFDKNIGQFQMIQLKLTQMAIKIQNMKNMVYRTAW 302

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D            R+ AP+ K +C + A  VI +AM+ +GG GY  +  ++R +R++ 
Sbjct: 303 ECDNDLPM-------RLSAPMCKLYCAQSACEVIDDAMQILGGLGYTNDSRVSRFWRDTR 355

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
            N I  G+   MV      + K
Sbjct: 356 VNRIGGGTDEIMVYISARQILK 377


>gi|327401705|ref|YP_004342544.1| Isovaleryl-CoA dehydrogenase [Archaeoglobus veneficus SNP6]
 gi|327317213|gb|AEA47829.1| Isovaleryl-CoA dehydrogenase [Archaeoglobus veneficus SNP6]
          Length = 350

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 139/382 (36%), Gaps = 39/382 (10%)

Query: 81  TPQLHAYGPG-GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
           TP+L         + D+ +   A   L++ +   GL        +  + +          
Sbjct: 5   TPELVELAARKAAKMDEEDRMDA--ELIKTAFELGLMGVTVPEKYGGLGKSFKKLCMLIE 62

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                       ++    +A+ + L  +  + + W P+                      
Sbjct: 63  ELGKVNAGFAVSVAAHHMAANAINLNGSGGLKEKWLPQFC---------------KKLAA 107

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258
              TE + G+D+ +I  + +   D  Y L+G+K  +++   ++ F++LA+ +     F+V
Sbjct: 108 FATTEPKAGSDLKSIELEARDEGD-CYVLNGNKTLITNGELAEVFVVLARCDNGFSLFVV 166

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
            R        G+  ++L N  G R +  V + F++        +      V +   +   
Sbjct: 167 ERG------EGMKVRKL-NAGGMRGSGLVSIRFNDVEVPKEDSIPNGLKAVMNTLNVSRP 219

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             + + +      L  AI YA+ R   G  + +   ++  +A++A DI A   + +  A 
Sbjct: 220 VFSAIGLGIAERCLDLAIKYAKERKAFGKRISEFQGIQWMLAEVAADIEALRLMVYSTAE 279

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S D  +S             + K    K A      A+E  GG G +   ++ R YR++ 
Sbjct: 280 SCDPVRS------------AMCKLIAAKTAKKAADVAIEIFGGHGTLRGAAVERAYRDAK 327

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+   M L +   L K
Sbjct: 328 ILDIGEGTSEIMKLIIARGLLK 349


>gi|319943552|ref|ZP_08017834.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743367|gb|EFV95772.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 611

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 98/561 (17%), Positives = 190/561 (33%), Gaps = 90/561 (16%)

Query: 38  SSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
             D    A +       V  +   L    L+   ++L    +   P+L A          
Sbjct: 20  LCDRARFASLRRDHFDAVLAQASQLARGCLAPANRQL----DEQEPRLTAED-------- 67

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P    ++      GL     DR+   +      +             A   + PS 
Sbjct: 68  VWTPPVLSEVMAAVRDAGLLAVSQDRALGGMQLPVLIEKAVTAWLFAGSAAATAYLYPSQ 127

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             + ++       +   W P +              K        ++E + G+ ++ I +
Sbjct: 128 AGSRLLQRHAGRALASAWLPLLL-------------KGRATCTFCISEPQAGSSLSDIRT 174

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVG----------CFLVPRL 261
           +  +  DG + L G+K ++             ++LA++E   G           FL P+ 
Sbjct: 175 RAVRQPDGSFRLYGNKMWIVGGDHAVTDNIVHLVLARIEDDSGDIMPGVESLSLFLAPKY 234

Query: 262 LE-----------DGSPNGLCYQRLKNKIGNRSNATVELEFS----------NTFGFLLG 300
           L             G  N +    +  ++G R   +  L F               +L+G
Sbjct: 235 LPADTNPAEGAAGRGERNDIVAAGIYPQMGQRGATSCLLSFGEGNHLPQGQAGAVAWLVG 294

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348
           + N     V +    I +D  + + +      + A+ YAR RH  G              
Sbjct: 295 EENAGMALVNEAAPEIQIDIGLSAAALGYAGYSHALDYARERHQ-GRFPGMNSQVGGQIP 353

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKY 402
           +I+   +KR +      +    AL    A   DE  +      R+       +++P+ K 
Sbjct: 354 IIEHADIKRMLLIQKSYVEGGLALGLWCARLMDEVDTAETSTERARARDLLLLLSPVAKS 413

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           W         + A++ +G  GY  +  + + YR++  N+IL G+   + L+++   LL  
Sbjct: 414 WSAHNGLIANSLAIQVLGCYGYTRDYPVEQLYRDNRLNTILEGTHGILALELMRDRLLAD 473

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA----RFLTEKIA---LASS 513
               F++    +EQ LG +  +   +   ++ L K  +       R   E  A   LA++
Sbjct: 474 DFMGFQRFAHEVEQTLGRAAARCGDVRHMAVQLQKYAERFGWVINRMRQEPEAGRRLANA 533

Query: 514 AAALYRAGMNDIADVFLENRF 534
           +  +   G   IA ++LE   
Sbjct: 534 SLFMEAFGHYVIAWIWLEQAL 554


>gi|170028323|ref|XP_001842045.1| glutaryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus]
 gi|167874200|gb|EDS37583.1| glutaryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus]
          Length = 415

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 115/313 (36%), Gaps = 36/313 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + PK+   E             +    GLTE   G+D +++
Sbjct: 124 SSLCMGAIYDYGSEAQKQKYLPKMARGE-------------LIGCFGLTEPNHGSDPSSM 170

Query: 215 TSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++         Y LSG K W  +SP++D  I+  +  +G+V  F+V R     S  GL 
Sbjct: 171 ETRAVHDPKTKTYVLSGSKTWITNSPVADVCIVWGKTEDGKVRGFIVDR---SESSQGLS 227

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             +++ K   R++ T  +            L      V  M+     L++A   ++   +
Sbjct: 228 TPKIQGKFSLRASDTGMILMDEVRIPEDNILP----NVSGMRGPFGCLNNARYGIAWGAL 283

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE     A  Y   R      L    +M++ +AD+  +I+   A    +    D+   
Sbjct: 284 GAAESCLKIARGYTLDRKQFKRPLAANQIMQKKMADMLTEISLGLAACLHVGRLKDQKIH 343

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E       M  + K      A  +   A + +GG+G  +E  I RH     A +   G
Sbjct: 344 TPE-------MISMLKRNNAGKALEIARVARDMLGGNGISDEYHIIRHVMNLEAVNTYEG 396

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   +
Sbjct: 397 THDIHALILGRAI 409


>gi|117928400|ref|YP_872951.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus
           cellulolyticus 11B]
 gi|117648863|gb|ABK52965.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus
           11B]
          Length = 378

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 129/373 (34%), Gaps = 19/373 (5%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIW----DRSFEPVVRKQAHKIRAARLYLMAQLE 147
              ++    P      +    + +  S+W    DR +  +   Q +  R  +     +L 
Sbjct: 12  REVEEFVRGPGERYAEQIEAENRVPESLWTELRDRGYLRLAAPQEYGGRGLQFSKYLELV 71

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               MS +     +  +    R       ++ + E       P     + +   LTE   
Sbjct: 72  ELFAMSHASLRMIVHVVNGIWRA----IDQLATDEQRKKFVLPQVAGDIRVAFTLTEPTA 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           GT  A I S   +  D  Y              D +++ A+V G  G      L+ D   
Sbjct: 128 GTG-ADIRSTVVRDGDTYYLTGEKHLITFGVRCDYWLLFARVAGTTGKDGTVALMVDRHS 186

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE----DMKILIYLDSAIM 323
             +  + +   +G R      L F  T   +   L      ++           +  A+ 
Sbjct: 187 PNVVVKEMSPSMGVRGTDHAHLIFRETPVPVANRLGAEGEGLDVAFGGFLTPSRISVAMT 246

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   R +   A+ YA++R   G  L D+ V+  A+A+ A DI AA  L+   A  ++  
Sbjct: 247 CVGLARRAQELAVEYAKQRVTFGKRLADRQVIAYALAENATDIEAARQLTLYAARQWESG 306

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 AA A  ++ + K     M   V  +A++  GG GY +   I R YR++ A    
Sbjct: 307 ------AADALTLSSMAKLNAVDMLTRVTDKALQIHGGIGYFQSSPIERVYRDARAQRFE 360

Query: 444 LGSGNAMVLDVLN 456
            G+       +  
Sbjct: 361 EGTNEIQKTVIAR 373


>gi|198414023|ref|XP_002124098.1| PREDICTED: similar to acyl-CoA dehydrogenase-like, partial [Ciona
           intestinalis]
          Length = 248

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +T+  +   D      G  W  +   +D    LA             +       G+   
Sbjct: 1   VTTTAKSDGDDFVINGGKMWTTNGSQADWMCCLANTGQGSIHENKSLICVPMDTPGVTVA 60

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R  +KIG  S+ TV++   +       ++G+                + +A  ++  +  
Sbjct: 61  RKIDKIGMHSSDTVQVFLEDVRVPKSFMIGEEGRGFTYQMLQFQEERMFAAAAALKPLET 120

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           ++ E I Y ++R + G  ++D  V+   +A++  ++ A  ++ +R    + +        
Sbjct: 121 AINETIAYTKQRKIFGRTILDNQVVHFRLAELQTEVEALRSMLYRTVGLYLKGHD----- 175

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                +A + K    ++A       ++  GG G+ +E  I+R+YR+    SI  G+   M
Sbjct: 176 --VTNLASMCKLKTGRLARETTDACLQYWGGMGFTKESIISRYYRDFRLVSIGGGADEVM 233

Query: 451 VLDVLNLL 458
           +  +   +
Sbjct: 234 LSIICKYM 241


>gi|269126571|ref|YP_003299941.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311529|gb|ACY97903.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 397

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 117/365 (32%), Gaps = 27/365 (7%)

Query: 102 AWHALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
               + R S         S  +R            +    L  ++      +      +A
Sbjct: 49  GMDEMARSSFKARAEAERSGAERKSGGGGNPALSILPIIELCKVSPGLVTAMGVSLGLAA 108

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    TP   + W   + +                     +TE   G+D    + S  
Sbjct: 109 GTIMKRGTPEQRERWGLDLLT-------------FDKVGAWAITEPGSGSDAFGGMQSTA 155

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL--VPRLLEDGSPNGLCYQRLK 276
           +K+ D         +  + P +D  +   +++         +   + D    GL   +  
Sbjct: 156 RKVGDEYILNGSKTFITNGPYADTIVFYCKLDDGRPPREREILTFVLDRGMPGLEQSKPL 215

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLA 333
            K+G   + T EL  S+        L       E  K   +      A M++  +   L 
Sbjct: 216 RKMGLHGSPTGELFLSDVRVGPDRLLAGGGSGKESAKQNFVTERAGLAAMALGVIEECLR 275

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            ++ YA+ R + G  + +  +++  +A +      A      L     E +        A
Sbjct: 276 LSVEYAKNRVLWGKPIGEYQLIQLKLAKM----EVARLNVQNLVFRHIEMQRAGRTPTLA 331

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A   K +  + A  V +EA++  GG+GY+ E  + +  R++ +  I  G+    +  
Sbjct: 332 E--ASAMKLYAAQAAVEVTSEAVQLFGGNGYMSEYRVEQLARDAKSFQIYAGTDEIQITH 389

Query: 454 VLNLL 458
           +   L
Sbjct: 390 IARDL 394


>gi|195577044|ref|XP_002078383.1| GD22569 [Drosophila simulans]
 gi|194190392|gb|EDX03968.1| GD22569 [Drosophila simulans]
          Length = 419

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 131/386 (33%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +LH       R +  +       ++      G+            V   A+ +    +
Sbjct: 57  QAELHPRVKMANRLETFD-----KKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREV 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P              M +  +    
Sbjct: 112 ERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPS-------------MAEGKLIGAF 158

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           GLTE   G+D A + ++ +  S    Y L+G K W  S+P++D  ++ A+  +G+V  FL
Sbjct: 159 GLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFL 218

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +   S  GL   +++ K   R++ T  +            L    G          
Sbjct: 219 VDRKI---SGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFS---GPFSC 272

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD   +IA     
Sbjct: 273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQA 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+     +       M  + K      +  +  +  + +G +G  +E  + R
Sbjct: 333 CLHVGRLKDQKLHTPD-------MISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIR 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 386 HVINLESVNTYEGTHDIHALILGRAI 411


>gi|163740791|ref|ZP_02148184.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           2.10]
 gi|161385782|gb|EDQ10158.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis
           2.10]
          Length = 386

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 128/399 (32%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   T        + +           E      D  +   A   L+      G      
Sbjct: 1   MADKTFLSWPFFEDRHRALAADLDRWAEDALAHIDHSDTDAACRGLVSALGAAGWTQHSG 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
             + E +  +    IR           A    +        ++L  T     +W P   S
Sbjct: 61  AMAGEALDVRTLCLIR--ETLARHDGLADFAFAMQGLGTGAISLFGTQAQQAEWLPLTRS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                LTE + G+D+A  T    +  +         W  +  ++
Sbjct: 119 G-------------KAISAFALTEPQSGSDVANSTMTAVRDGEHYVLNGEKTWISNGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      GL        +     AT  L FS+       
Sbjct: 166 DVYTLFARSGEGPGAKGLSAFVVPAGLPGLEVVERLETLAPHPLAT--LRFSDCRIPRSA 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M +L       A  ++   R +L EA+     RHV G  L D  +++ 
Sbjct: 224 LLGAPGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTSRHVQGAPLADLQMVQG 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+ALD+ A+  L +R A + D        AA     A + K +    A  +I +A++
Sbjct: 284 HIADMALDVDASALLVYRAAWAKDSG------AARITREAAMAKLFSTDQAQKIIDKAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G  + + +   YR+  A  I  G+ +   + +  
Sbjct: 338 LHGGDGVRQGQKVEELYRDIRALRIYEGASDVQRVVIAR 376


>gi|72161688|ref|YP_289345.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915420|gb|AAZ55322.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 388

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 32/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLM 152
           D+ +  P         +  G         +        +A  +        A +     +
Sbjct: 32  DQSQEFP--WEFYNAIVEAGWLGLTVPTEYGGGGLGVTEAAIVEQEIAASGAGMNGCSAV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     +    +  + + + P++ S +               +   +TE   GTD  
Sbjct: 90  HIGIFGFEPIIKYGSEDLKQRFLPRLVSGDLH-------------VSFAVTEPDAGTDTT 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPN 268
            +++  +K+  G        W   +  ++  I+LA+   R         +          
Sbjct: 137 NLSTFARKVDGGWLVSGKKVWITKAQEAERLILLARTTPRDQVAKKTDGLTLFFAPMDRE 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +  + +  K+G  +  T EL   + F     ++G++      +        + SA  ++
Sbjct: 197 RVTVRPIP-KMGRNAVDTNELFIDDLFVPDEDVIGEVGKGFKTILAGLNAERVISANAAI 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L  A +YA+ R V G  +     +   +A+  + + AA  +  + A   D    
Sbjct: 256 GIGRAALRRATNYAKERVVFGRPIGKNQGIAFPLAEALIKLDAADLMCQQAAWLIDNGYP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +A  A+ +A    ++    A +V        GG GY +E  I R++RE+    I
Sbjct: 316 AGRQANAAKFLAAEAGFFAADAALSV-------HGGYGYSKEYHIERYFREARLMRI 365


>gi|319763631|ref|YP_004127568.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824104|ref|YP_004387407.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118192|gb|ADV00681.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309476|gb|AEB83891.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 380

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 123/361 (34%), Gaps = 26/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +    +    G    ++              +  A        +    +     +A  +A
Sbjct: 40  YEAYDKIAQQGWLGLLFSEEEGGAGGNIFDYVLMAEGLGKYGFDFAAAILVPTFTAMNIA 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      +               P  +  +   + ++E   G+D +   ++ ++ ++
Sbjct: 100 KYGTQAQKDKYIK-------------PFIEGKIRFSVSISEPDAGSDASNTKTRARRDAN 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + +SG K + S   +   ++  L + +       +  LL      GL   +L   +  
Sbjct: 147 GDWIVSGQKLWCSGAAAQDVVIAMLVRTDPDNKHGGLSVLLIPNDTPGLVINKLPT-LSR 205

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            +  T E+   N       +LG+       + +   L     A       + +++ A+ Y
Sbjct: 206 HATGTTEIFLDNVRVPGDAILGEEGQGWKIITEHLELERCSVAAAYTGNAQEAVSNAVRY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L D  V+K  +AD   ++ AA  L +R A    E K  S E + A++ A 
Sbjct: 266 AHDRVQFGKQLWDFQVLKHMLADRQTEVDAARLLCYRAAQMASEHKPCSREVSMAKLYAS 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            T   C           M+ +GG   + E  + R+ RES   +I  G+       +   +
Sbjct: 326 ETLKQC-------ALTGMQVLGGYANLPEADMERYLRESIQCTIGGGTSQIQKTIIAKSM 378

Query: 459 E 459
            
Sbjct: 379 R 379


>gi|307610654|emb|CBX00242.1| hypothetical protein LPW_19871 [Legionella pneumophila 130b]
          Length = 375

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 134/374 (35%), Gaps = 32/374 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + +DK +  P           +G   +   + F      +         +       
Sbjct: 25  PHAKIFDKEQNIP--RDFFYTLAQNGFLGAGIPKQFGGRQWDELTIGIMHESFAKEFCSL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            ++++     +  +    +    + W P+I S E                 L LTE   G
Sbjct: 83  ANILTVLGMVSKSLLQFGSKAQKQIWLPRIASGE-------------TLAALALTESNIG 129

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  + +Q     D        K+     ++D F++LA  +G+     +  +L +   +
Sbjct: 130 SDLEHVETQLLDAGDEFILKGSKKYITLGQIADLFLVLANCQGQ-----LTAVLVEKGTS 184

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM----- 323
           GL    + N +G RSN   E+ F N        L  S G   +  I   LD         
Sbjct: 185 GLIITPMSNFLGLRSNMLAEIFFDNCRIPKTNLLG-SIGIGFNCVIQTALDEGRYTTAYG 243

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   +  L  A+ Y ++R      L +  ++++ I ++ + + AA  L F         
Sbjct: 244 CVGLGQACLDAALGYTQKRKQFDRRLDEHQLIQKMITEMVVQVKAARELCFYA------G 297

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R ++         I KY   KM   V   A++  G +G+ E   + R+YR++    I+
Sbjct: 298 ELRQQKNPAYIAETLIAKYAASKMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEII 357

Query: 444 LGSGNAMVLDVLNL 457
            G+     + +  L
Sbjct: 358 EGTSQMHEILISKL 371


>gi|332253001|ref|XP_003275641.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 428

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 122/320 (38%), Gaps = 34/320 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSVMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMQGLSAPRIQGKFSLRASATGMIIMDGVEAP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILL 444
            +E  + RH     A +   
Sbjct: 395 SDEYHVIRHAMNLEAVNTYE 414


>gi|323454738|gb|EGB10607.1| hypothetical protein AURANDRAFT_58729 [Aureococcus anophagefferens]
          Length = 385

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 117/368 (31%), Gaps = 35/368 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMV 162
            AL  R    GL     D S              +     A    A   ++ ++   + V
Sbjct: 38  RALFARCGELGLLGVTADESCGGSGMDAVAACVVSEELSAADPAFALSYLAHAMLYVNNV 97

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  +    + W P                  S    + ++E   GTD+  + +      
Sbjct: 98  NVNASEAQKRRWLPG-------------ACDGSKVCAMAMSEPGAGTDVLGMRTAAVDAG 144

Query: 223 DGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ-RLK 276
           D         W  +       + D  ++ A+         V          G     R+ 
Sbjct: 145 DHYVLDGSKMWITNGCVDSETLGDGALVYARTGPGKAD--VSLFHVGPETPGFSLGQRIT 202

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLA 333
            K+G R++ T EL F          ++   G    M     L  +  A M+V   +  + 
Sbjct: 203 GKLGMRASPTAELVFEGCVVPKEDLVSEWNGAALCMMRNLELERVILAAMAVGIAKRCVD 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               YA  R   G  + +   M+R +A+    + AA A  +  A + D   + +      
Sbjct: 263 RMGKYAAERAAFGRPIAEFGQMQRHVAESYAKLMAARAYLYATAGNLDLRTAGNR----- 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                +       +A  V   A++  GG GY+ E  + + +R++    I  G+  +   +
Sbjct: 318 -----LDTDGATTVAKEVADAAIQVHGGYGYVAEYQVEQLWRDAKLLEIGGGTLESHHKN 372

Query: 454 VLNLLEKG 461
           ++  L  G
Sbjct: 373 MIRDLADG 380


>gi|304311238|ref|YP_003810836.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796971|emb|CBL45184.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 558

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 124/330 (37%), Gaps = 41/330 (12%)

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             AG L++     +  +    T    + W PK+              +      + +TE 
Sbjct: 241 AAAGSLITRPEIMSRALLKGGTEEQKQYWLPKL-------------AQAQPLCAVAVTEP 287

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLE 263
             G+D+A +  +  +   G +      W   +  +   + LA+      VG   +   L 
Sbjct: 288 NYGSDVAQMRLKATRTDGGWHLNGEKTWCTFAGKAGVLLTLARTNPDLSVGHRGLTMFLV 347

Query: 264 DG------------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTG 307
           +             +  G    +    IG R   +  + F N F      + G+  V  G
Sbjct: 348 EKPSSDGHEFNHTQATGGTVSGKAIPTIGYRGMHSFTVFFDNYFVPDSHVIGGEAGVGQG 407

Query: 308 PVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               M       + +A  +   M+ +    I YA+ R V G  +   P+    IA +A+ 
Sbjct: 408 FYFTMAGFAGGRIQTAARATGVMQAAFERGIAYAQERQVFGKPIAAYPLTLVKIARMAML 467

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           ++ +   ++ +A   DE K          + A + K + CK +  +  EAM+  GG GY 
Sbjct: 468 LSVSRQFTYYVARLMDEGKG--------HMEASLVKLYSCKSSEWLCREAMQIHGGMGYA 519

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
           EE +++R++ +S   SI  G+   + L V+
Sbjct: 520 EESAVSRYFIDSRVLSIFEGAEETLALKVI 549


>gi|91788432|ref|YP_549384.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91697657|gb|ABE44486.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 627

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 97/582 (16%), Positives = 189/582 (32%), Gaps = 107/582 (18%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          R+D 
Sbjct: 6   TLDFLLYQWLDAESLNRRERFADHSRETFDAVFDTCERIAREKYAPFNRTVDTQEPRFDG 65

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      H   +     G+  +  D     +      +  A   + MA +  G  M  
Sbjct: 66  EKVILPQVTHDAQKAYAASGMLSAAQDYDVGGMQLPYTVEAAANAFFAMASVSIGSGM-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+++ +  T      +A   FS  +  T             + L+E + G+ ++ +
Sbjct: 125 TTGNANLLMVHGTDAQKDVFAKNEFSGRFSGT-------------MCLSEPQAGSSLSDV 171

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++     +G         Y L G+K ++S+   +       ++LA++ G          
Sbjct: 172 VTRAVPDGEGFEADPLGPRYRLKGNKMWISAGEHELTENIIHLVLAKIPGPDGKLIPGTR 231

Query: 252 RVGCFLVPRLLED-----------------------GSPNGLCYQRLKNKIGNRSNATVE 288
            +  F+VP+ L +                       G  N +    L +K+G R      
Sbjct: 232 GISLFIVPKWLVNVESPPPGPLPGGEGEKGSVKVTLGPRNDVALAGLNHKLGWRGTINTL 291

Query: 289 LEFS----------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           L F              G+L+G  +     +  M     +     +          ++ Y
Sbjct: 292 LNFGEGKYPVNGEAGAIGYLVGKPHEGLRCMFHMMNEARIGVGTAATMLGMAGYYASLDY 351

Query: 339 ARRRHVSGGI--------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           A+ R   G                +I+   +KR +         A AL    A   DE  
Sbjct: 352 AKNRPQ-GRPVGPGGKDAAQPQIRIIEHADVKRMLLAQKAYCEGALALELYCARLVDEHH 410

Query: 385 SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +   +AA        ++ PI K W  +      + A++  GG GY  +  + +++R++  
Sbjct: 411 TGEPQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRL 470

Query: 440 NSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ---------DLGSSGKKVITILR 488
           N I  G+     +D+L   +L +G    + L   +           +L S  + + T L+
Sbjct: 471 NMIHEGTHGIQAMDLLGRKVLMEGGRGLQLLGERINATVEKAMRVPELASYAQALGTALQ 530

Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
              S  +      +      ALA++   +   G   +A V+L
Sbjct: 531 QVESATRAAWASGKA---GEALANAVPYMQGFGHTVLAWVWL 569


>gi|118473149|ref|YP_888359.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174436|gb|ABK75332.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 399

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 110/284 (38%), Gaps = 8/284 (2%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMS 240
           E       P  +      + ++E   G+D ++ T+       G Y ++G KWF++   ++
Sbjct: 103 EQRERYLIPAARGDRRDAVAISEAGAGSDFSSATTTATPDGKGGYIINGQKWFVTVGDVA 162

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
           D  I+LA +E           L D +  G+    +            E  F++       
Sbjct: 163 DFLIVLAYIEPEHAP---TMFLIDVATPGVKITDVPRYTHTFVYEHPEFTFTDVHVGPEA 219

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG +        D      L     ++     +L  A+ +A+ R   G  LI++ +++ 
Sbjct: 220 VLGGVGAGLELTRDWFTEERLMIGARTIGAAERALTLAVEWAKDRVQGGQPLINRQLIQG 279

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAM 416
            IAD  +DI    A + ++A  FD A   + +        A   K    + +  V+   +
Sbjct: 280 MIADSVVDITTNRAYTHQVAWEFDHADPTNADQRKTLHAKAATVKLAASEASNRVVDRCV 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  GG GYI +  + R +RE   + I  G+     L + N   K
Sbjct: 340 QIFGGRGYIRDYPVERLWRELRVDRIWEGTSEIQRLVIANETNK 383


>gi|72161472|ref|YP_289129.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915204|gb|AAZ55106.1| glutaryl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 396

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 124/394 (31%), Gaps = 36/394 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E  +  T +E  R      P +  +   G         P  H L R+    GL     D 
Sbjct: 26  ERAVRDTVREFGR--RELLPHVAEWFAAG-------TIPDPHGLARKFGQLGLLGMHLDG 76

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
              P     A+ +    L  +       +      + + +    +    + W P++ + E
Sbjct: 77  YGCPGAGAVAYGLACRELEAVDSGLRSFVSVQGSLAMTAIHRYGSEEQKQQWLPRMAAGE 136

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             GLTE   G+D  A+ ++ +++           W  +  ++D 
Sbjct: 137 -------------AIGCFGLTEPDSGSDPGAMRTRARRVGADWVLTGTKMWITNGSVADV 183

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A  E  +  FLVP         G     ++ K+  R++ T  L            L
Sbjct: 184 AVVWAGTEEGIRGFLVPA-----GTPGFTATVIERKLSLRASITAALSLDEVRLPDSARL 238

Query: 303 NVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
            ++ G    +  L          +    R     A+ YA  R   G  +    + +R +A
Sbjct: 239 PLAAGLRAPLSCLTEARYGIVWGAAGAARACYEAALEYATSREQFGQPIAAFQLTQRKLA 298

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++ +D+  A+  +  L    +       + ++ ++            A +V        G
Sbjct: 299 EMVVDVNQASLTALHLGRLKEAGACHHYQVSFGKLANVAAAQRVAAKARSV-------HG 351

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            +G   +  + RH       +   G+     L +
Sbjct: 352 ANGITLDYPVLRHLLNLETVATYEGTEEIHTLSL 385


>gi|330834067|ref|YP_004408795.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329566206|gb|AEB94311.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 378

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 138/366 (37%), Gaps = 28/366 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E +     ++R     GL       ++  +   +     A          A H +   + 
Sbjct: 32  EKNEGGEKIVRDFGEMGLLGMKIHPNYGGLGLGEIAFAIATEELGAESGGASHSLHTQLN 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +  ++  +      + W  +               K      + LTE   G+D+ A+ + 
Sbjct: 92  ALQLLVSIGGDSAKQ-WIEE-------------GVKGKEIYAVALTEPGAGSDLGALQTT 137

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRL 275
            ++  + +  +SG K F S+   S   ++LA+  G  G    +  LL D    G+   +L
Sbjct: 138 ARQEGNEL-VISGEKIFTSAASFSSKMLVLARTSGNPGDRQGISLLLVDSKTPGIEIHKL 196

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            + +G R      ++F+N       ++G    +        ++     A ++V   R ++
Sbjct: 197 -DLMGIRGAGVSYVKFNNARVPKDSIVGKEGDAFRGAIKALMVSRNGYAGIAVGIARGAV 255

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A++ A  R   G  L++Q  +   +AD  + + A+  L+ R A   D+      EA+ 
Sbjct: 256 EDAVNRAASRKQFGKSLLEQEWISFNLADALVKVEASRLLTMRAAAMLDKGIEALTEASM 315

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+ MA IT       A  V   A+   GG G      + R YR++    I  G+    ++
Sbjct: 316 AKYMAAIT-------AAEVSRTALHIFGGHGLNRGSKVERLYRDAKIMEIAEGTNEMQLI 368

Query: 453 DVLNLL 458
            V   L
Sbjct: 369 AVSRAL 374


>gi|170097926|ref|XP_001880182.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
 gi|164644620|gb|EDR08869.1| glutaryl-CoA dehydrogenase [Laccaria bicolor S238N-H82]
          Length = 424

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 110/311 (35%), Gaps = 35/311 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + P +              K  +    GLTE   G+D A +
Sbjct: 134 SSLVMHPINEFGTEAQKEKYLPLL-------------AKGELIGAFGLTEPNHGSDPAGM 180

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCY 272
            +  +++  G        W  ++P++D FI+ A  + + R+  F++     D    GL  
Sbjct: 181 ETTAEEVDGGFILNGSKTWITNAPVADVFIVWANCKWDNRIRGFIL-----DKGLKGLTA 235

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SG 327
             +KNK+  R++ T  +   +        L  S G          L+SA   +       
Sbjct: 236 PAIKNKVALRASLTGSIFMDSVRVSGDALLPKSKGLGSAF---SCLNSARYGISWGVMGA 292

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +   +     YA  RH     L    ++++ + D  +++A     S ++    DE K   
Sbjct: 293 LEDCIERTRAYALERHQFNRPLASFQLVQKKLVDAQIEVALGLLASLQVGRLKDEGK--- 349

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                A  M  + K   C  A       ++ +GG+   +E  + RH       +   G+ 
Sbjct: 350 ----LAPEMVSMIKKNNCGKALQHSRVVLDILGGNAAADEYHVGRHVANLQVTNTYEGTN 405

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 406 DIHTLILGKAM 416


>gi|160898756|ref|YP_001564338.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364340|gb|ABX35953.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 645

 Score =  200 bits (508), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 93/571 (16%), Positives = 189/571 (33%), Gaps = 98/571 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P          ++D 
Sbjct: 37  TIDFLLYEWLRADALGERERFADHSRDTFDAVLDTCERIAREKYAPFNRTVDTQEPQFDG 96

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      H   +     G+  +  D     +      +  A   +  A +  G  M  
Sbjct: 97  EKVILPQCTHDARQAYADSGMLSAAQDYDIGGMQLPYTVEAAANSFFAAASISIGSNM-L 155

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ +    T    + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 156 TSGNANAIMAHGTDMQKQVFATNEFNGRWAGT-------------MCLSEPQAGSSLSDI 202

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++ +              Y L G+K ++S+   +       ++LA++ G          
Sbjct: 203 ATRAEPDGADFESDALGPRYRLKGNKMWISAGDHELTENIVHLVLAKIPGPDGKPVPGVK 262

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 263 GISLFIVPKKLVDTEGQLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGRFPVRGGAGAV 322

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------ 349
           G+L+G        +  M     +   + +          ++ YA+ R   G  +      
Sbjct: 323 GYLVGKPGEGLKCMFHMMNEARISIGMAATMLGLAGYHASLDYAQNRPQ-GRPIKGAPGA 381

Query: 350 ------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-----EEAAY 392
                       I+   +KR +         A AL+   A   DE  + +     E    
Sbjct: 382 AGKDATRPQSRIIEHADVKRMLLAQKSYCEGALALNLFCARLVDEQHTGTPESVAEARLL 441

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ PI+K W  +      + A++  GG GY  +  + +++R++  N I  G+     +
Sbjct: 442 LEVLTPISKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAM 501

Query: 453 DVLN--LLEKGTNLFEQLF---------STLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
           D+L   +L +G    + L          +    +L     ++   L++  +  K     A
Sbjct: 502 DLLGRKVLMEGGKGLQLLATRVNDTIQRAMARPELAGHANELAKALQEVGATTK-----A 556

Query: 502 RFLTE--KIALASSAAALYRAGMNDIADVFL 530
            + T+  + ALA++   +   G   +A  +L
Sbjct: 557 AWATDDPQQALANAVPYMQAFGHTVLAWTWL 587


>gi|300712456|ref|YP_003738269.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
 gi|299126140|gb|ADJ16478.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3]
          Length = 384

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 31/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ER ++V+  P    ++  +   GL   +    +            A           
Sbjct: 29  PEAERIERVDEFP--REVINEAGEYGLLGIMVPEEYGGEGSDFLSYCLAVEQIAEVSGAV 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +     +   +    T    K++               PM +      + LTE   G
Sbjct: 87  AETIQGHTFAMLPILNFGTDEQRKEYLE-------------PMVQGERVGAMLLTEPGAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVG-CFLVPRLLED-- 264
           +    + +  +   +  Y +SG K F  ++ ++D  +++A+          V   L    
Sbjct: 134 SSPTELETVAEADGED-YSISGEKSFGTNAGVADVHLVVARKRPAPEEGHGVSVFLVPSV 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
               G  ++R +  +G R + T +  F +       LLG++            +      
Sbjct: 193 DDGEGFAFERKE-FMGMRGHITGDSTFDDVRVDESALLGEVGEGFRIAMGTIDMARTGLG 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +     R +  EAI YA  R   G  +     ++  +AD+   +  A  L +  A +  
Sbjct: 252 AIGTGIARGAFGEAIDYAGARDQGGQAVGQYQAVQVLVADMDARLDGARHLVYDSAKAIA 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +  + +++ A+ +A     +       V   A++  GG GY ++  + R YR++   S
Sbjct: 312 DGEPSTRKSSKAKYVASEAAEF-------VTRNAIQVHGGKGYRKDLPLERFYRDAKILS 364

Query: 442 ILLGSGNAMVLDVLN 456
           I+ G+       V  
Sbjct: 365 IIGGTNEIQKTTVAG 379


>gi|158426272|ref|YP_001527564.1| isobutyryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158333161|dbj|BAF90646.1| isobutyryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 564

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 139/374 (37%), Gaps = 37/374 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++ R    G+        +  +   +              +  G L + S  +A ++  
Sbjct: 212 EVIGRLAELGVFGLTIPEEYGGLGLPKEAMCVVTEELSRGYIGVGSLGTRSEIAAELIIG 271

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + PK+ S E  PT                TE   G+D+A++ ++  K  D 
Sbjct: 272 GGTDEQKAHYLPKLASGEILPTAV-------------FTEPNTGSDLASLRTRAVKEGD- 317

Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQ 273
           +Y +SG+K +++ P+ +D   +L +      G   +  LL +             G+   
Sbjct: 318 VYKVSGNKTWITHPVRADLMTLLVRTNPAEPGYKGLSMLLAEKPRGTDEDPFPAKGMTGG 377

Query: 274 RLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            ++  +G R     E+ F          L G        + +      + +A  +V   +
Sbjct: 378 EIE-VLGYRGMKEFEIGFDGFEVPAGQLLGGVEGQGFKQLMNTFEAARIQTAARAVGVAQ 436

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            ++   + YA  R   G  LI  P +   I  +A++IA A  +++  A + DE +    E
Sbjct: 437 AAMETGLRYAEERIQFGKPLIAFPRVADKIVMMAVEIAIARQITYFAARAKDEGRRTDLE 496

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  ++++         ++A A    A++  GG+G+  E  ++R   ++   +I  G+   
Sbjct: 497 AGMSKLL-------GARVAWAAADNALQIHGGNGFALEYQVSRLLCDARILNIFEGAAEI 549

Query: 450 MVLDVLNLLEKGTN 463
               +   L +   
Sbjct: 550 QAQVIARRLLEEGR 563


>gi|209885194|ref|YP_002289051.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
 gi|209873390|gb|ACI93186.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5]
          Length = 395

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 39/394 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + DK       H L+      G+           +                   +   L 
Sbjct: 31  KCDKAFSPELAHQLMSILNPYGIGAGWLPEDGGGMGLSYMTSGMLYGELARLAPDVAGLA 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  +A  +    T      + P              M +  +     +TE   G+++ 
Sbjct: 91  YVSEGAAMKIYRRGTAEQKARYLPG-------------MAEGRIIGCGAVTEPGTGSNVR 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + ++  +  +G        +  ++ ++D   +LA+       F +   + D S +    
Sbjct: 138 QLRTRAVRDGEGWRLSGEKMFISNATVADISTVLART--GENEFGI--FILDRSVHKFES 193

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMR 329
             L+ K+G    +   +   N +      L   T  + +            A++S    R
Sbjct: 194 GELE-KLGLNGWSFGSITLDNVYIGDEFRLGDGTSGLSEAMSGFERARAWVAVISSGIAR 252

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L +AI YA  R   G  +    ++++ +AD+A +  A   L+++   + D        
Sbjct: 253 AALDDAIRYATERDQFGVPIATHQLVQQLLADMACETEAMQLLTYKALAALDAGGRCDLP 312

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    + K +  + A  V + A++  G  G   E  + RH+R +   +I  G+   
Sbjct: 313 -------TSMAKVYASEAAVRVASRAIQVHGACGVTREFPVERHFRNARMLTIPDGTTQI 365

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
             L +   L             +   LG++G+K 
Sbjct: 366 NQLIIGRELT-----------EIPAFLGAAGRKT 388


>gi|258510163|ref|YP_003183597.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476889|gb|ACV57208.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 404

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 127/337 (37%), Gaps = 35/337 (10%)

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            + AA             +         V    TP   + +       E           
Sbjct: 83  GVIAAEELAWGDPAIALSLPGPGLGGPPVQSTGTPEQKERFLGIFTKDEPR--------- 133

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR 252
                   LTE   G+D++ I +  +K+ DG Y L+GHK ++++    ++++  A V+  
Sbjct: 134 ---WGAYALTEPGAGSDVSGIRTSAKKV-DGGYVLNGHKVYITNGGRASWVVAFATVDPS 189

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-----TG 307
           +G       + +    G    R+ +K+G R++ T EL F + F  +   L          
Sbjct: 190 LGRAGHRAFVVEKGTPGFTCTRVAHKMGLRASETAELVFEDCFVPIDNLLGGEAHYENRA 249

Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361
                ++ +   DS    V+ M V +A A +     + ++ +  G  +     +   + +
Sbjct: 250 GSSGFRVAMSTFDSTRPIVAAMAVGIARAAYEYTLEFVKQEYPRGQRVRH--DVLAKLGE 307

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   I AA  L++  A   D  +  ++EAA  +  A        +++  V A+ +E +G 
Sbjct: 308 MDAKIHAARLLTWEAAWKADLGQPNAKEAAMCKAHAG-------RVSLEVCADCLEIMGP 360

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G ++   + + YR+     I  G+     L V   L
Sbjct: 361 IG-LDGHLVEKLYRDVKVFDIFEGTNQIQHLIVARRL 396


>gi|281353034|gb|EFB28618.1| hypothetical protein PANDA_009866 [Ailuropoda melanoleuca]
          Length = 410

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 114/319 (35%), Gaps = 30/319 (9%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 117 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYTYGSKEQQQKYLPRL------------- 163

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D  ++ ++ +    +          W  +SP++D F++ A+ 
Sbjct: 164 AKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNSPVADLFVVWARC 223

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
           E       +   L +    GL   +++ K   R+++T  +   +       +L D++   
Sbjct: 224 EDS----CIRGFLLEKGMRGLSAPKIEGKFSLRASSTGMIVMDSVEVPEENVLPDVSGLA 279

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           GP   +        A   +      L  A  Y   R   G  L    ++++ +AD+  +I
Sbjct: 280 GPFGCLNN-ARFGIAWGVLGAAEFCLHTARQYTLDRIQFGAPLARNQLIQKKLADMLTEI 338

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                   +L    D+ K+  E       M  + K   C  A  +  +A + +GG+G  +
Sbjct: 339 TLGLHTCLQLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDILGGNGISD 391

Query: 427 ERSIARHYRESPANSILLG 445
           E  + RH     A +   G
Sbjct: 392 EYHVIRHAMNLEAVNTYEG 410


>gi|307296288|ref|ZP_07576115.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878090|gb|EFN09313.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 388

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 114/359 (31%), Gaps = 28/359 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L   S   GL       S         H    A    +A     + + P   +  M+ 
Sbjct: 49  QRLDAASRDMGLWGLDAPESIGGTDLP--HVAMVAVNEALAHSITPYTLPPDSPNLRMLM 106

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                +    +               P  +      +G++E   G+D A +T++  +  D
Sbjct: 107 AAANDQQRAAYLE-------------PYVRGETISAIGISEPGAGSDPAGMTTRADRDGD 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNR 282
                    W   +  +D  I +A  +   G    +   L D    G    R    IG  
Sbjct: 154 DWILNGRKIWITRAAEADFTITMAVTDREKGARGGMSAFLVDRDTPGFNVTRRIPMIG-- 211

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
              + E+E  N       LLG       P++       ++ A  SV   + +L   + +A
Sbjct: 212 GQVSYEVELDNCRVSGWKLLGAEGAGFSPMQVRLSTRRVEMASWSVGMAKRALDMMLEFA 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L D+  ++  +A+ A  I AA  + F  A   DE +    E         +
Sbjct: 272 PHRKTFGAALSDRQAIQFWVAEAATRIHAARLMIFDCAWKLDEGRDVRSE-------ISM 324

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K++  +MA  V+  AM+  G  G  +E  +           I  G        V   L
Sbjct: 325 IKWYATEMAYEVVDRAMQTFGAMGMTKEMPLQMMSERLRTMRIYDGPTEIHKWVVARNL 383


>gi|195471768|ref|XP_002088174.1| GE18434 [Drosophila yakuba]
 gi|194174275|gb|EDW87886.1| GE18434 [Drosophila yakuba]
          Length = 419

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 130/386 (33%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R +  +       ++      G+            V   A+ +    +
Sbjct: 57  QAELQPRVKMANRLETFD-----KKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREV 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P              M +  +    
Sbjct: 112 ERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPS-------------MAEGKLIGAF 158

Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           GLTE   G+D A + ++ +  S    Y L+G K W  S+P++D  ++ A+  +G+V  FL
Sbjct: 159 GLTEPNHGSDPAGMETRAKYDSKTKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFL 218

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +   S  GL   +++ K   R++ T  +            L    G          
Sbjct: 219 VDRKI---SGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFS---GPFTC 272

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD   +IA     
Sbjct: 273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQA 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+     +       M  + K      +  +  +  + +G +G  +E  + R
Sbjct: 333 CLHVGRLKDQKLHTPD-------MISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIR 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 386 HVINLESVNTYEGTHDIHALILGRAI 411


>gi|154251819|ref|YP_001412643.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155769|gb|ABS62986.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 395

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 136/400 (34%), Gaps = 32/400 (8%)

Query: 72  ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK- 130
            + R A     +          WD+   +PA   ++++    G+     D  +       
Sbjct: 19  RMLRDATRRFAEAEMPREKAREWDRGNIYPA--DVMKKLGAMGMMGLTVDERYGGAGVDI 76

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
            A       +   +   A   +     +   +    +    ++  PK+ S          
Sbjct: 77  YATMAVIEEIAKRSVAVACPYIMAVCYAGMNLGESVSEEQKQELLPKVASG--------- 127

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
               ++    GL+E   G D+A + +  ++  D +      +W   + ++D    L +  
Sbjct: 128 ----NLLFAYGLSEPNVGGDLATVETTARREGDELVINGTKRWCTGAHIADYIFCLLRTG 183

Query: 251 G-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
                   +  +L   +  G+    L + +G R   T ++ F +    +   L       
Sbjct: 184 PKEDKYKNLSIVLVPPTLPGISITPLGH-LGIRGVETKDVSFDDVRVPVSNILGGQAMWN 242

Query: 310 EDMKILIY-------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
           +    L         L+ +  ++     +LA+A  YA  R   G  +     ++  +A+ 
Sbjct: 243 KGWSQLAGRALEVEKLELSACALGLSEAALADAWRYAEERTQFGRAIAGHQAIRHTLAEA 302

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A   + +  A   D  +  S E         + K +CC+ A  V    M   G  
Sbjct: 303 QTHVRAMRLMLYSAAWLADRGRPCSVE-------TSMAKLFCCEGAAEVTQMCMRVTGAY 355

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
           G  ++  + R+ R++ +  I+ GS N    ++ N L+ G 
Sbjct: 356 GLSDQMDMERYVRDAVSLPIVGGSSNMQKNNIANRLKLGQ 395


>gi|257076973|ref|ZP_05571334.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1]
          Length = 359

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 147/353 (41%), Gaps = 25/353 (7%)

Query: 116 HCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
             + +DR  ++   +RK++  +    +   A++  G      V +   +AL TTP    +
Sbjct: 24  VAADYDRKEAYPDELRKKSLSLGIVDMQNPAKVMIGIEELCRVDAGLGIAL-TTPYFGSE 82

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
               +F  +        + K    +GLG+TE  GG+D+A + +  +K  +  Y L+G K 
Sbjct: 83  -VIMLFGNDAQKAILEDVYKGKYILGLGVTEPSGGSDVAGLKTTAKKQGN-KYILNGSKM 140

Query: 234 FLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
           F+++  ++D  ++LA+  E       +   L +    G    +L +K+G R+  T EL+F
Sbjct: 141 FITNGSIADYLVVLARTSEDSNPHHGLSTFLVNTKLKGFKANKLVDKLGVRATNTAELQF 200

Query: 292 SN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           +N   +   L+G+       +     +  +  A  S+   R +  +   Y +  +     
Sbjct: 201 NNIELSEDDLIGEEGKGFYYIMMFFNISRIYVAAQSLGIARGAFDKIKSYIKENN----- 255

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + D+  M   ++D+   I A   +++  A    E K + E       +  + K +  + A
Sbjct: 256 IKDEESM-FRLSDVGTRIEATRQMTYNAATYLFEFKPKPE-------LTSMAKAYGSETA 307

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
                 AME +G     E+  + R +R +    I  G+     L +   + KG
Sbjct: 308 VYAAESAMEILGDHSAYED--VQRIFRNAKIMEIWEGTSEIEKLVIARYILKG 358


>gi|119870252|ref|YP_940204.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|119696341|gb|ABL93414.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 389

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 115/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL     +          A+ +    L  +       +      +   + 
Sbjct: 50  RELASEFGKLGLLGMHLEGYGCGGSTATAYGLVCQELEAVDSGLRSMVSVQGSLAMFAIH 109

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K W P              M    V    GLTE   G++ A + +  ++   
Sbjct: 110 KHGSEEQRKQWLP-------------AMATGDVIGCFGLTEPDFGSNPAGMRTTARRDGS 156

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ E  +  F+VP         G   + +K+K+  R+
Sbjct: 157 DWILNGSKMWITNGSVADVAVVWARAEEGILGFVVPA-----GTEGFSGREMKHKLSLRA 211

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL   +        L  + G    +  L          SV   R  L   + Y   
Sbjct: 212 SNTSELHLDDVRLPAEAQLPDARGLSGPLACLSEARFGIVFGSVGAARDCLETTLDYVGS 271

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  IAD+A+++  A  L+  L    DE + R ++ ++        K
Sbjct: 272 REVFDKPLAAYQLTQAKIADMAVELGKAQLLALHLGRLKDEGRIRPDQVSFG-------K 324

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  + RH     +     G+     + +   L
Sbjct: 325 LNNVREALAIARQCRTLLGANGITLEYPVLRHANNLESVLTYEGTSEVHQMVIGEAL 381


>gi|108801111|ref|YP_641308.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|126436949|ref|YP_001072640.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771530|gb|ABG10252.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|126236749|gb|ABO00150.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 376

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 115/357 (32%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL     +          A+ +    L  +       +      +   + 
Sbjct: 37  RELASEFGKLGLLGMHLEGYGCGGSTATAYGLVCQELEAVDSGLRSMVSVQGSLAMFAIH 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    K W P              M    V    GLTE   G++ A + +  ++   
Sbjct: 97  KHGSEEQRKQWLP-------------AMATGDVIGCFGLTEPDFGSNPAGMRTTARRDGS 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ E  +  F+VP         G   + +K+K+  R+
Sbjct: 144 DWILNGSKMWITNGSVADVAVVWARAEEGILGFVVPA-----GTEGFSGREMKHKLSLRA 198

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL   +        L  + G    +  L          SV   R  L   + Y   
Sbjct: 199 SNTSELHLDDVRLPAEAQLPDARGLSGPLACLSEARFGIVFGSVGAARDCLETTLDYVGS 258

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  IAD+A+++  A  L+  L    DE + R ++ ++        K
Sbjct: 259 REVFDKPLAAYQLTQAKIADMAVELGKAQLLALHLGRLKDEGRIRPDQVSFG-------K 311

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  +    +G +G   E  + RH     +     G+     + +   L
Sbjct: 312 LNNVREALAIARQCRTLLGANGITLEYPVLRHANNLESVLTYEGTSEVHQMVIGEAL 368


>gi|311748665|ref|ZP_07722450.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
 gi|126577195|gb|EAZ81443.1| acyl-coenzyme A oxidase 4 [Algoriphagus sp. PR1]
          Length = 452

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 125/368 (33%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++ +     +    +     P          A  +  +    +     
Sbjct: 104 WNKAEFP---MQIIPKMAELDIAGLTYQGYGCPGHSALLEGFIAMEMARIDTSISTFFGV 160

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + +  +    K+W P              MQK       GLTE   G+ +A 
Sbjct: 161 QSGLAMGSIYICGSEEQKKEWLP-------------AMQKLEKIGAFGLTEPEVGSGVAG 207

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +T+  ++  D        KW  ++  SD  I+ A+             +      G   
Sbjct: 208 GLTTTCKREGDTWILNGQKKWIGNATFSDLTIIWARDLDDQQVKG---FIVRKDNPGFKA 264

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRV 330
           ++L++K+  R+     +  +         L  +    +  K+  +     A  +V   R 
Sbjct: 265 EKLEDKMALRTVQNALITLTKCEVPESDRLQEANSFRDTAKVLRMTRAGVAWQAVGCARG 324

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y   R   G  +    +++  +  +  D+ A   + FRL+   D    + E A
Sbjct: 325 AYELALAYTNERKQFGRPIASFQLVQDILVTMLGDLTAMQTMVFRLSEMQDGDILKDEHA 384

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A       K +C     +++  A E  GG+G + +  IAR   ++ A     G+    
Sbjct: 385 SLA-------KVFCTLRMRSIVDHARELFGGNGILLKHDIARFVADAEAVYSYEGTKEIN 437

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 438 SLIVGRAI 445


>gi|319779856|ref|YP_004139332.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317165744|gb|ADV09282.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 382

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 120/379 (31%), Gaps = 31/379 (8%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L A+       D  +   A   L+ +   DG        +  P                 
Sbjct: 23  LEAWCTTNLPVDHHDVDAACRELVSKLGRDGWLKPTALDTDNPGPLDVRTLCITRETLAR 82

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A    +        ++L  T    + W  K              +         L+
Sbjct: 83  HDGLADFAFAMQGLGTGALSLFGTVEQ-RQWLSK-------------TRAGKAISAFALS 128

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E R G+D+A       +  D         W  +  ++D +++ A+     G   +   L 
Sbjct: 129 EPRSGSDVANTEMTATRDGDSYVLTGEKTWISNGGIADLYVVFARTGEAPGAKGLSAFLV 188

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
            G   GL        I         L F      +   +     P +  +I +       
Sbjct: 189 PGDAKGLGIAERLEVIAPH--PLARLSFERVRLPVTALIG---KPGDGFRIAMSVLDVFR 243

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 ++   R +L E+I     R + G  + +  +++  IAD+ALD+ AA  L +R A
Sbjct: 244 STVGAAALGFARRALDESIKRVAERKLFGAPMAELQMVQGHIADMALDVDAAALLVYRAA 303

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D        AA     A + K +    A  VI +A++  GG G  +   +   YRE 
Sbjct: 304 WTKDMG------AARVTREAAMAKLFATDKAQEVIDKAVQLHGGDGVRKGHIVESLYREI 357

Query: 438 PANSILLGSGNAMVLDVLN 456
            A  I  G+ +   + +  
Sbjct: 358 RALRIYEGASDVQKVVIAR 376


>gi|171913241|ref|ZP_02928711.1| acyl-CoA dehydrogenase domain protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 620

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 92/506 (18%), Positives = 173/506 (34%), Gaps = 65/506 (12%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+    P   A+L      G         +  +   Q +  R A L          L+S
Sbjct: 92  IDREGEIPD--AVLEGLASLGAFGIKIPVKYGGLGLSQTNYSRTAMLLGGVCGNMAALLS 149

Query: 154 P--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S+     + +  T      + P+    E                   LTE+  G+D 
Sbjct: 150 AHQSIGVPQPLLMFGTEEQKARFLPRCAKGE--------------ISAFALTEQDVGSDP 195

Query: 212 AAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           A + +Q  K +DG  Y L+G K W  +   +   +++A+             + + S  G
Sbjct: 196 ARMKTQAVKSADGTHYVLNGEKLWCTNGTKAGVLVVMARTPSPTHPHATTAFIVETSMPG 255

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGM 328
           +   +  + +G R+     + F +    +    NV  G    +K+ L  L++  +++   
Sbjct: 256 VEVVQRCHFMGLRALYNGVMRFHDVRVPV---ENVLGGEGRGLKVALTTLNTGRITLPAA 312

Query: 329 RVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
              LA+        +AR R   G  +     +   +A +A    A  A+   ++   D  
Sbjct: 313 CAGLAKYCLEVSTRWARDRVQWGQPIGRHAAIADKLARMAAHTFALEAVVRYVSALVDRD 372

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARH 433
           K+     A  R+ A + K W  +    ++ + M+  GG GY   +           I R 
Sbjct: 373 KN-----ADVRLEAALGKLWGSERGWEIVDDTMQIRGGRGYETADSLKSRGEKPEPIERF 427

Query: 434 YRESPANSILLGSGNAMVLDVLN-----LLEKGTNLF-------EQLFSTLEQDLGSSGK 481
           +R++  N+I  GS   M L +        L+ G   F       ++    L      +  
Sbjct: 428 FRDARINTIFEGSSEIMRLFIAREMLDSHLKLGAAAFNTKLPLKDRALVFLRAARHYAKW 487

Query: 482 KVITIL-----RDSISLCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
                L     RD I+L  + +      R L+ K+A   +  A+ R G     +  +  R
Sbjct: 488 YPTRFLPFSDDRDDINLHPDLEQSMRDVRRLSRKLAR-HTLYAMLRYGPKLEREQLVLGR 546

Query: 534 FLDNCHSTHCMLHGRFNAAHIIDSLY 559
            +D       +      A   ++  +
Sbjct: 547 LVDIGAEIFALGCAASYAQSKVEDAF 572


>gi|327350756|gb|EGE79613.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 428

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 95/476 (19%), Positives = 156/476 (32%), Gaps = 78/476 (16%)

Query: 2   TLREIYRRL-------AMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV 54
           T+R  +RRL       + N   + + S    N        N Y+ D L           +
Sbjct: 5   TVRHAFRRLHAANHFVSNNIPRRYAHSTATFNWQDPLGTTNLYTEDEL----------AI 54

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
                   +  L+    E  R  NY+                         ++R     G
Sbjct: 55  QDTARQYCQERLAPRILEAYRNENYD-----------------------KEIIREMGELG 91

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L  +  D      V   A  +    +  +       +   S    + +    T      +
Sbjct: 92  LLGATIDGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLIMTGIHKFGTQAQKDKY 151

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK 232
            P +              K       GLTE   G+D +++ S  +      G Y +SG K
Sbjct: 152 LPDL-------------AKGKKLGCFGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSK 198

Query: 233 -WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVE 288
            W  +SP+SD F++ A+    G++  F++ R   D  P G L    +KNK   R++ T  
Sbjct: 199 TWITNSPISDYFLVWAKLETTGKIKGFIIER---DQCPPGTLETPAIKNKTALRASITGM 255

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRH 343
           ++  +             G V        L+SA + ++      +   +  A  YA  R 
Sbjct: 256 IQLDSCPVPEANMFPDVEGLV---GPFTCLNSARLGIAFGTMGALEDCIDRARTYALERK 312

Query: 344 VS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    ++++ +AD A D A  T  + ++A   DE KS  E       M  I K 
Sbjct: 313 QFKGNPLAKYQLVQKKLADAATDAAYGTLAAVQVARLNDERKSVPE-------MISIIKR 365

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             C  A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 366 QNCDRALVGARTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAM 421


>gi|154244267|ref|YP_001415225.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158352|gb|ABS65568.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 563

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 135/367 (36%), Gaps = 37/367 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        F  +   +              +  G L + S  +A ++    T    
Sbjct: 219 EMGVFGLTIPEEFGGLGLPKEAMCVVTEELSRGYIGVGSLGTRSEIAAELILAGGTDDQK 278

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             + PK+ + E  PT                TE   G+D+A++ ++  K  D +Y +SG+
Sbjct: 279 AHYLPKLAAGEILPTAV-------------FTEPNTGSDLASLRTRAVKEGD-VYKVSGN 324

Query: 232 KWFLSSPM-SDAFIMLAQVEG-RVGCFLVPRLLEDGSP---------NGLCYQRLKNKIG 280
           K +++ P+ +D   +L +      G   +  LL +             G+    ++  +G
Sbjct: 325 KTWITHPVRADVMTLLVRTNPAEPGYKGLSILLAEKPRGSDENPFPAEGMTGGEIE-VLG 383

Query: 281 NRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     E+ F          L G+       +        + +A  +V   + ++   +
Sbjct: 384 YRGMKEYEIGFDGFTVPAANLLGGEEGQGFKQLMTTFESARIQTAARAVGVAQAAMEVGL 443

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  LI  P +   I  +A++   A  +++  A + DE +    EA  A+++
Sbjct: 444 KYAEERIQFGKALIHFPRVADKIVMMAVETMIARQITYFAARAKDEGRRTDLEAGMAKLL 503

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                    ++A A    A++  GG+G+  E  ++R   ++   +I  G+       +  
Sbjct: 504 -------GARVAWAAADNALQIHGGNGFALEYPVSRILCDARILNIFEGAAEIQAQVIAR 556

Query: 457 LLEKGTN 463
            L  G N
Sbjct: 557 RLLDGGN 563


>gi|206564536|ref|YP_002235299.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198040576|emb|CAR56562.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 384

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 123/392 (31%), Gaps = 42/392 (10%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
            A  +AR A+            G   D+         L  RS   GL             
Sbjct: 28  EAAVMAREADGQ--------RFGLLVDERAH------LDERSRQLGLWGLDAPLDVGGSD 73

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                 +       +      +++ P   +  M+           +              
Sbjct: 74  LPAVAMVGV--NEAIGTTVTPYILPPDSPNLRMLCDAADDAQRARYLD------------ 119

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
            P  + +    + ++E   G+D  A+++      DG        W   +  +D  I++A 
Sbjct: 120 -PYARGATRAAMAISEPGAGSDPGALSTTAVHDGDGWVLNGRKIWISHAADADWTIVMAL 178

Query: 249 VEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNV 304
            +   G    +   + D    G   +R    IG    +T E+   +       LLG    
Sbjct: 179 TDRSKGKRGGMSAFIVDRDTPGFIIERRIPMIG--GLSTYEIVLEDCRIPAAQLLGPEGA 236

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
              P++       L+ A   +     ++A    +A++R   G  L ++  ++  +AD   
Sbjct: 237 GFTPMQARLANRRLEMAAWCIGRAERAVALLCDHAKQRTTFGVPLAERQAVQWWVADALT 296

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            I A   +++  A   D  +        AR    + K +  +MA  VI  AM+ +G  G 
Sbjct: 297 QIHACRLMTYEAAARVDAGQD-------ARTQISMVKVFATEMAWTVIDHAMQTLGAMGM 349

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +E  + +   E+    I  G        V  
Sbjct: 350 TKEMPLQQMASEARLMRIFEGPTEVHRWVVAR 381


>gi|111219693|ref|YP_710487.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111147225|emb|CAJ58875.1| putative Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 389

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 128/382 (33%), Gaps = 34/382 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQL 146
              G  WDK    P    +L      G+           V R   A  +    L   +  
Sbjct: 32  DAAG--WDKAAHFP--RPVLDELAELGVMGLAIPEEHGGVGRDIHATLMVIEELSKRSMA 87

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A   +  +  +   V    +      W P+I                 +    G TE  
Sbjct: 88  VAIPYIMAACYAGMTVVDCASKEQKAQWLPEI-------------AAGRMLFAYGWTEPD 134

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDG 265
            G D+A++ +  ++  D +      ++   + +SD    LA  + G      +  +L   
Sbjct: 135 VGADLASVRTTVRRDGDELVINGAKRFCTGAGLSDYIYTLANSDPGGARYRNLSLVLVPP 194

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-------L 318
              G+    + + +G + + T ++ F +        +    G      ++         L
Sbjct: 195 DAEGVTITPI-DAMGIKGSQTTDVVFDDVRVPADLLMGGEDGWNRGWSMITGTGLDVEKL 253

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           + A M++     +  +A+ YA +R   G  ++    +   +A++ + + A+  +    A 
Sbjct: 254 EVAAMALGLGIAAYEDALAYAEQREQFGVPILKHQSVAHTLANMRVQLYASRLVLDDAAE 313

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D       +         + K +  +    V+ +A   +G  GY+ +  + R+ R++ 
Sbjct: 314 LADRNDVCGVQ-------TSMAKLFVTETCRQVVLDAQTILGAYGYVADFDVERYVRDAL 366

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I+ GS      ++ N   +
Sbjct: 367 LMPIIGGSSAIQRNNIHNWSRR 388


>gi|119946241|ref|YP_943921.1| acyl-CoA dehydrogenase domain-containing protein [Psychromonas
           ingrahamii 37]
 gi|119864845|gb|ABM04322.1| acyl-CoA dehydrogenase domain protein [Psychromonas ingrahamii 37]
          Length = 633

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 145/388 (37%), Gaps = 46/388 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E+ D  +  P    ++      GL      + +  +   Q +  R     +M  + +   
Sbjct: 89  EKVDATQTIPT--DVIEGMAELGLFAMKVPKEYNGLGLSQVNYNR-----VMIAISSYCG 141

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +  + SA     +  P        K+F  +       P+ +        LTE   G+D 
Sbjct: 142 STAVLLSAHQSIGVPQPL-------KMFGTKAQKEKYLPLFREGKISAFALTEPEVGSDP 194

Query: 212 AAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL-----VPRLLED 264
             + +      DG  Y ++G K + ++  ++D  +++A+ E ++         +   + +
Sbjct: 195 GKMETTATLSDDGEHYLINGVKLWCTNGLIADVLVVMARTEDKIANNGEQIKQITAFIVE 254

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIM 323
               G+  +   + +G R      ++F+N    L    N+  G  + +K  L  L++  +
Sbjct: 255 KEMPGIEIKHRCDFMGIRGIQNGVIKFTNVKVPL---ENIILGKGKGLKLALATLNTGRL 311

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
           ++           LA A  +   R   G  +       + IA IA    A  A+++  ++
Sbjct: 312 TLPAAATGMSKYCLAVAREWGNERVQWGLPIGKHEAGSKKIAFIAASTFAMEAVTYLTSH 371

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE----------ER 428
             D+ K          I A + K +C +++  VI E M+  GG GY +            
Sbjct: 372 MADDPKLDIR------IEAAMAKLFCSELSWKVIDETMQFRGGRGYEKASSLKARGEKGY 425

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            I R  R++  N I+ G+ + M L +  
Sbjct: 426 PIERMMRDTRINRIIEGTTDIMKLFLAR 453


>gi|325969829|ref|YP_004246021.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
 gi|323709032|gb|ADY02519.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28]
          Length = 386

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 133/379 (35%), Gaps = 32/379 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+  ++P    ++R    +G+   +  R +            A  + ++++   
Sbjct: 30  PVADKIDRENYYP--REVIRELGENGILAPVMPREYGGYGMDILGT--ALSIEVISRYSG 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +   V    +     T    +                  + +  +     L+E   G
Sbjct: 86  SMGILTEVQGFLVTDAFYTYGNKQ----------MREELVPKLARGELIGSFALSEPCCG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSP 267
           +D AAI ++ ++            W      +D +I+  +          V   L   + 
Sbjct: 136 SDAAAIETRAERRGGEWVINGKKMWITQGLYADVYIVFTRTGPKEARHKAVTAFLLRRN- 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV- 325
             +    +   +G R   T EL F++    ++GD ++   P E  +I +  L+   ++V 
Sbjct: 195 KCIEASPIY-VMGIRGTGTSELTFNDC---VVGDDDIVGKPNEGFRIAMEALNLGRIAVV 250

Query: 326 ----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                    +L EA+ + + R      L D   ++  +ADI   +    ++ +  A+ FD
Sbjct: 251 SVTLGLAEAALTEALGWVKNRRAFNQQLSDLEWVQFQLADIMAYMETMRSIVYDAASRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R  E  YA   A I K     +   +I  A++  G  G      + R YR++    
Sbjct: 311 ----RKYEDYYA--FASIAKLTSVLIGMDIIRRAVQLTGAYGVWSNSKLNRIYRDAKLME 364

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+     + +   L K
Sbjct: 365 IGEGTNEVQRMVIYKWLSK 383


>gi|169629481|ref|YP_001703130.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169241448|emb|CAM62476.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 428

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 117/316 (37%), Gaps = 37/316 (11%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +A   T    + W P++ + E                   +TE   G+D    + +  
Sbjct: 127 PTIASRGTAAQMECWLPELVTYE-------------KVGAWAITEPDSGSDAFGGMKTYV 173

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV-PR------LLEDGSPNGL 270
            +  +  Y L+G K F+++   +D  ++ A++    G   V PR       + D    G 
Sbjct: 174 TRDGED-YILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGF 232

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              +   K+G  S+ T +L F N               D             +  +  A 
Sbjct: 233 TQSKPFRKMGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAA 292

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +++  +   L  ++ YA+ R + G  +    +++  +A + +       + F    S  E
Sbjct: 293 LALGVIEECLRLSLDYAKSRTLWGKEIAQFQLIQLKLAKMEVARLNVRNMLFHAIESLSE 352

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+ S   A A  +      +C + A  V  +A++  GG+GY+ E  + +  R++ +  I
Sbjct: 353 NKTPSLAEASAIKL------YCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMI 406

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    +  +   L
Sbjct: 407 YAGSNEVQITHIAKGL 422


>gi|114571235|ref|YP_757915.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris
           MCS10]
 gi|114341697|gb|ABI66977.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10]
          Length = 391

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 26/313 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + +     +  ++L  +    + W P   + +                   LTE   
Sbjct: 93  ADFVFAMQGLGSGAISLFGSSDQQQAWLPGTGTGKLC-------------AAFALTEPDA 139

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+AAI+++ +   D  Y +SG K F+S+  ++D +++ A+     G   +  ++   +
Sbjct: 140 GSDVAAISTRAELDGDH-YAISGEKTFISNGGIADFYVVFARTGEADGARGLSAIIVPAT 198

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-GPVEDMKIL--IYLDSAIM 323
             GL        I         L F      +   +     G    M  L          
Sbjct: 199 TPGLEVVERIETIAPH--PLARLRFDKCRVPVTHRIGEGGSGFRIAMGTLDVFRSTVGAA 256

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +L EA   ARRR++ G  L D P ++  +A++A+DI AA  L +R A + D+ 
Sbjct: 257 ALGFARRALDEATARARRRNLFGAPLADLPGVQTQLAEMAMDIDAAALLIYRAAWTKDQG 316

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                 AA     A + K +  + A   I  A++  GG G  +       YRE  A  I 
Sbjct: 317 ------AARVTREAAMAKLYATEAAQRAIDTAVQIFGGLGVTKGSVPEALYREIRALRIY 370

Query: 444 LGSGNAMVLDVLN 456
            G+     L +  
Sbjct: 371 EGASEVQKLVIAR 383


>gi|33603683|ref|NP_891243.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577808|emb|CAE35073.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 382

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 131/361 (36%), Gaps = 29/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +  R    GL    +  +       +    I    L  ++Q  A    + +      +
Sbjct: 41  RRVFERWSELGLLGVRYPEADGGSGLDKVSDCIVREELSYLSQAFASTWSAHTHLGIWPI 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP     +              AP        G GL+E  GG+++ A+ ++ +++ 
Sbjct: 101 WKAGTPAQKARFL-------------APALAGGKVAGFGLSEPDGGSNVRAMKTRAERVE 147

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        +  ++P +D  ++ A+    +    +   + +    G    +LK K G R
Sbjct: 148 GGWRLHGSKLYITNAPFADFLLVAARTSAALKPESISLFIVELPNAGFDIAKLK-KEGIR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--- 339
           ++ T  +   N F      L  + G      IL  L    + V+   + +A A   A   
Sbjct: 207 ASETALIHIDNAFVPDDCLLGETEGTYP--LILESLSENRVGVAANALGMARAAFDAAAS 264

Query: 340 --RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R V+G  + +   +   +AD++  I AA  L +  A   D+    +  AA  +++A
Sbjct: 265 FANDRLVAGKRVGEYQAIAHKLADMSAQIEAARWLVYYGAWRVDQGTLDAATAARVKLVA 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A AV  +A+   GG+G + E  + R +R++    I  G+       +   
Sbjct: 325 -------SETAVAVSEQAIRIFGGAGIMREYPVGRIHRDALVYVIGEGTSEIQKNIIARS 377

Query: 458 L 458
           L
Sbjct: 378 L 378


>gi|319763100|ref|YP_004127037.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117661|gb|ADV00150.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 382

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/373 (17%), Positives = 137/373 (36%), Gaps = 31/373 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGH 150
           E  ++ E  P    + +R    GL    +  +       +    I    L  M+Q  A  
Sbjct: 31  EDAEENEHFP--RHVFKRWGELGLLGVRYPAADGGSDMDKVSDCIVREELSYMSQAFATS 88

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             + +  +   +  + T    + +               P        G  L+E  GG++
Sbjct: 89  WSAQTHLAIWPIWKIGTEGQKERFFK-------------PALAGDKIAGFALSEPDGGSN 135

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           I A+ ++ +K+  G        +  ++P++D  ++ A+    +    +   + +    G 
Sbjct: 136 IRAMKTRAEKVEGGWKLSGSKLYITNAPIADFLMVAARTSPELKPDAISLFIVELPHKGF 195

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              +L  K G R + T  +   + F     D  V         +L  L    + V+   +
Sbjct: 196 DIHKL-RKEGIRGSETALIHIEDAFVP--DDCLVGGRTGTYPLLLECLSENRVGVAANAL 252

Query: 331 SLAEAIHYARRRH-----VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +A A   A +       V+G  + D   +   +AD+A DI AA  + +  A   D+ + 
Sbjct: 253 GMARAAFDAAKAFADDRIVAGKRIGDYQAVAHKLADMAADIEAARWMVYYGAWLVDQNRL 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  AA  +++A        + A  V  +A+   GG+G + E  + R +R++    I  G
Sbjct: 313 DAATAAKVKLIA-------TETALRVSEQAIRIHGGAGIMREYPVGRIHRDAFVYVIGEG 365

Query: 446 SGNAMVLDVLNLL 458
           + +     +   L
Sbjct: 366 TSDIQRNIIARDL 378


>gi|296139054|ref|YP_003646297.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296027188|gb|ADG77958.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 389

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 118/366 (32%), Gaps = 30/366 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+R     G+     +      +    + +    L          +      +   + 
Sbjct: 51  RGLMRSLGSLGVLGMHLEGYGCGGMTATEYGVACLELEACDSGLRSMVSVQGSLAMFAIW 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P + + E             V    GLTE   G+D AA+ ++ ++   
Sbjct: 111 RWASEAEKQRWLPGMAAGE-------------VVGCFGLTEPDHGSDPAAMRTRARRDGA 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ AQ +  +  F VP         G     +K+K+  R+
Sbjct: 158 DWVIDGRKMWITNGSVADVAVIWAQTDDGIRGFAVPT-----ETPGFTANTIKHKMSLRA 212

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T EL              ++    GP+  +           ++   R ++  A  YA 
Sbjct: 213 SVTSELVLDGVRVPESAAFPEVRGLRGPLSCLS-EARYGIVWGAMGSARTAIECAQRYAV 271

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    + ++ +AD++L+      L+  L    D    R E+         + 
Sbjct: 272 EREQFGRPIGGFQLTQQKLADMSLEYVKGILLALHLGRLKDATGLRPEQ-------VSLG 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K    + A  +   A   +G +G   E  + RH     +     G+     L +L     
Sbjct: 325 KLNNVREAIEICRTARTILGANGISLEYPVIRHANNLESVLTYEGTVEMHTL-ILGQKLT 383

Query: 461 GTNLFE 466
           G + F 
Sbjct: 384 GQDAFR 389


>gi|109123600|ref|XP_001110300.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 1
           [Macaca mulatta]
          Length = 428

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 122/320 (38%), Gaps = 34/320 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + N+  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENMLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILL 444
            +E  + RH     A +   
Sbjct: 395 SDEYHVIRHAMNLEAVNTYE 414


>gi|19920834|ref|NP_609040.1| CG9547 [Drosophila melanogaster]
 gi|194862544|ref|XP_001970027.1| GG23615 [Drosophila erecta]
 gi|7297127|gb|AAF52395.1| CG9547 [Drosophila melanogaster]
 gi|16197809|gb|AAL13534.1| GH06693p [Drosophila melanogaster]
 gi|190661894|gb|EDV59086.1| GG23615 [Drosophila erecta]
 gi|220944996|gb|ACL85041.1| CG9547-PA [synthetic construct]
 gi|220954906|gb|ACL89996.1| CG9547-PA [synthetic construct]
          Length = 419

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 130/386 (33%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R +  +       ++      G+            V   A+ +    +
Sbjct: 57  QAELQPRVKMANRLETFD-----KKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREV 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P              M +  +    
Sbjct: 112 ERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPS-------------MAEGKLIGAF 158

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257
           GLTE   G+D A + ++ +  S    Y L+G K W  S+P++D  ++ A+  +G+V  FL
Sbjct: 159 GLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFL 218

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +   S  GL   +++ K   R++ T  +            L    G          
Sbjct: 219 VDRKI---SGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFS---GPFSC 272

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD   +IA     
Sbjct: 273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQA 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+     +       M  + K      +  +  +  + +G +G  +E  + R
Sbjct: 333 CLHVGRLKDQKLHTPD-------MISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIR 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 386 HVINLESVNTYEGTHDIHALILGRAI 411


>gi|325922917|ref|ZP_08184632.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
 gi|325546607|gb|EGD17746.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865]
          Length = 416

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 126/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W          GL  +    R     +   A+ +    L         
Sbjct: 68  GDAFDAGRFPSEWVP---ELAELGLLGASLPVRDGGAGLGAVAYGLICQELERGDSGLRS 124

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    +    GL+E +GG+
Sbjct: 125 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRLIGCFGLSEAQGGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L + S   
Sbjct: 172 DPAAMTTRAVREGDGWRLNGSKMWITNGSIASLAIIWAHTDD-----GVCGFLVETSSAV 226

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
              Q + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 227 FSAQDIAHKMSLRASVTSGLFLDNVFVPEQMRLPNAAGLKAPLGCLNQARYGIAWGAIGA 286

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ Y+ +R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 287 AVACLREALAYSGQRILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKEAGTLRP 346

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 347 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 399

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 400 TVHQLVVGRAL 410


>gi|295691002|ref|YP_003594695.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432905|gb|ADG12077.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 564

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 130/376 (34%), Gaps = 41/376 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G+        +      +      +     A +  G L + S  +  ++  
Sbjct: 213 ELVEELGELGVFGLTIPEEYGGSGMGKTAMCVVSEELSRAWIGVGSLATRSEIAGELILT 272

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PKI S E  PT                TE   G+D+ ++ ++ +   D 
Sbjct: 273 GGTDAQKEYWLPKIASAEILPTAV-------------FTEPNTGSDLGSLRTRAELKGDQ 319

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP---------NGLCYQR 274
                   W   +  +D   +L + E        +  LL               G+    
Sbjct: 320 YVVTGNKTWITHAARADVMTLLVRTEPGTTDYRGLSMLLAPKPRGTDEAPFPAEGMSGGE 379

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           +   IG R     EL F    GF +   N+  G P +  K L+       + +A  +V  
Sbjct: 380 I-QVIGYRGMKEYELGFD---GFTVPAENLLGGVPGQGFKQLMATFESARIQTAARAVGV 435

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA  R   G  + + P +   +A +A +I     L++  A   DE K   
Sbjct: 436 AQAALETGLGYALDRQQFGQAIFEFPRVANKLAMMAAEIMGVRQLTYYAARQKDEGKRCD 495

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++A            A    A++  GG+G+  E + +R   ++   +I  G+G
Sbjct: 496 LEAGMAKLIAARVA-------WAAADNALQIHGGNGFAMEYAASRLLADARILNIFEGAG 548

Query: 448 NAMVLDVLNLLEKGTN 463
                 +   L  G N
Sbjct: 549 EIQAQVIARRLLDGGN 564


>gi|118464496|ref|YP_881797.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118165783|gb|ABK66680.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 372

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 123/361 (34%), Gaps = 29/361 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVA 163
           AL  ++   GL        +         ++  A      ++ A      +   +   + 
Sbjct: 36  ALQAKAREAGLWSLQTPEEYGGAGLSVLGQVVVAEEAAKCRMGAFFPALGAFGGNPPNIM 95

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKIS 222
              TP   + +A  +                       +TE  GG+D A AI  +  +  
Sbjct: 96  FKATPEQFEKYARPVIDGIMSKAYT------------AITEASGGSDPARAIKLKATRDG 143

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                     W   +P +D  ++ A+     G   +   + +    G+ + R+       
Sbjct: 144 SSYLLNGSKMWISHAPDADWGVVYART--GEGRHGISAFILEKGTPGVTFSRIPV---MA 198

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S A  EL F N       L+G+         +  +   +  A   +   + +L  A  +A
Sbjct: 199 SFAPYELHFDNVRLPAEQLIGEEGQGFSLAGEFLVHGRIVYAAGPIGIAQSALDMACRWA 258

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V GG L D+  ++  + D  +D+ AA  L ++ A++ D  +    +       A +
Sbjct: 259 RDRDVFGGRLADKQGIQWMLVDSEVDLRAARLLMYQAASNADLGRDVRVD-------ASV 311

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  + A  V+   ++  G  G   E  + R +R+     +  G+       +   L 
Sbjct: 312 AKMFGTEAAYRVLDRCIQIHGALGISTELPLERWFRDLRVKRLGEGATEVQREIIARSLV 371

Query: 460 K 460
           +
Sbjct: 372 R 372


>gi|295839766|ref|ZP_06826699.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB74]
 gi|197698456|gb|EDY45389.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB74]
          Length = 386

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 121/382 (31%), Gaps = 26/382 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              ER ++    P    L       G         +       +  +    ++  +    
Sbjct: 24  RWAERIEETGEVPE--ELWAELNGLGFLRMAAPAEYGGHGLPFSRWMELMEIFSRSHGSI 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++         +    T    K +               P     + I   LTE   G
Sbjct: 82  RMIVHVVNGIWRAMDGHATEEQRKRFVI-------------PSVTGEIKIAFTLTEPGNG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           T  A IT+   +  D  Y              D +++ A+VEG  G      LL   +  
Sbjct: 129 TG-ADITTSVVREGDTYYLSGSKHLITFGVRCDYYLLAARVEGSTGHEGTVALLVPRNAP 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMS 324
           G+  +   + +G        L F  T   +   L      ++           +  A+  
Sbjct: 188 GVTVEDTSHTMGVTGTDHASLTFDRTPVPVDHRLGAEGEGLDVFLGGFLTPSRVSVAMSC 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +   A+ YAR R   G  L  +  ++  +A+ A DI AA  L    A  F++  
Sbjct: 248 VGLAERAQQLAVAYARDRVTFGKALTQRQAIQFMLAENAADIEAAKQLVLHAARRFEQG- 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A  A + + + K     M   V  +A++  GG GY + + I R YR++ A     
Sbjct: 307 -----AEDASMQSSMAKMHAVTMLTNVTDKALQIHGGLGYWKSQKIERVYRDARAQRFEE 361

Query: 445 GSGNAMVLDVLNLLEKGTNLFE 466
           G+       V   + + T   E
Sbjct: 362 GTNEVQKAVVFREVLRRTPAPE 383


>gi|7669494|ref|NP_039663.1| glutaryl-CoA dehydrogenase, mitochondrial isoform b precursor [Homo
           sapiens]
          Length = 428

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 121/320 (37%), Gaps = 34/320 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILL 444
            +E  + RH     A +   
Sbjct: 395 SDEYHVIRHAMNLEAVNTYE 414


>gi|271968155|ref|YP_003342351.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270511330|gb|ACZ89608.1| Glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 382

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 106/285 (37%), Gaps = 13/285 (4%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFL 235
           ++ S E       PM          LTE  GG+D+AA + +  ++  D        +W  
Sbjct: 101 RLGSDEQRERWLPPMAAMEKIGAFALTEPEGGSDVAAGLRTTARREGDVWVLNGAKRWIG 160

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           ++  +D  ++ A+ E           + +    G    +++NKI  R+    ++  +N  
Sbjct: 161 NATFADLVVVWAKDEADGQVKG---FVVEKGTPGFSATKIENKIALRTVQNADITLTNCL 217

Query: 296 GFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L  + G  +   IL       A  +V  M  +   A+ YA+ R   G  +    
Sbjct: 218 VREENRLRDANGFRDTAAILRQTRGGVAWQAVGCMMGAYELALEYAKDREQFGRPIAGFQ 277

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +  +  ++  +  +  RLA   D    + E +A A       K +C       + 
Sbjct: 278 LVQDLLVRMLGNVTCSLGMVVRLAQLQDAGVYKDEHSAMA-------KAFCTVRMREAVG 330

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              E +GG+G + +  + R   +S A     G+     L V   +
Sbjct: 331 WGREIMGGNGIVLDYGMGRFVADSEAIYSYEGTREINSLIVGRAI 375


>gi|83771139|dbj|BAE61271.1| unnamed protein product [Aspergillus oryzae]
          Length = 559

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 125/332 (37%), Gaps = 24/332 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +A   T    + W PK+              K  +   LG+TE   G
Sbjct: 242 WGLGGGNNIGCPPIARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEPDAG 288

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I++  ++  D        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 289 SDVANISTTARREGDVYVVNGAKKW-ITNGIWADYCTAAVRTGGPGKGGISLLVIPLAAP 347

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  +E  +       L+G+ N     +        L  A  S+
Sbjct: 348 GVTRRRMYNS-GVHASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLACASL 406

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A HYA +R   G  LI +  ++  I    L I  A A   +L N  +  K 
Sbjct: 407 RLARVCAEDAFHYATQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIELTKD 466

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
           R  +      M  + K    +     + EA + +GG+GY    +   I +  R++  + +
Sbjct: 467 RPTDDVRIGGMTALLKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVV 526

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
             GS   M   +   L++ T         LE+
Sbjct: 527 GGGSEEIM---MGLALQEETKALRTRRKALEK 555


>gi|262201749|ref|YP_003272957.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262085096|gb|ACY21064.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 407

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 119/343 (34%), Gaps = 41/343 (11%)

Query: 141 YLMAQLEAGHLMSPSVTSASM--------VALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           ++M  +E   +    V S  +        +    T    K W P++ + E          
Sbjct: 84  FMMVNIELAGVCLGLVGSMGVSMGLTPGTIRGKGTLAQKKRWLPELVTME---------- 133

Query: 193 KTSVAIGLGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    +TE   G+D +  + +  ++  D         +  + P +D  ++ A+++ 
Sbjct: 134 ---KVGAWAITEPDSGSDALGGMKTTVKRDGDDYILKGQKTFITNGPYADTIVVFAKLDD 190

Query: 252 RVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---- 303
                +    V   + D    GL   +   K+G  S+ T EL F N        L     
Sbjct: 191 GSDTPMRDRKVLSFVLDKGMPGLTQGKAFKKMGMMSSPTGELFFDNVRLGRDRLLGETED 250

Query: 304 -----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                  +   +       +  A +S+  +   L  ++ YA+ R + G  +    +++  
Sbjct: 251 TGSDARGSEGAKAGFTAERVGIAALSLGIINECLRLSLDYAKNRKLWGQEIAQFQLIQLK 310

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ +       + F         K        +   A   K +  K A  V  EA++ 
Sbjct: 311 LAEMEVARINVQNMLFSAIERAQAGKP------LSLSEASAMKLYSSKAATDVAMEAVQL 364

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG+GY+ E  + +  R++ +  I  GS    V  V   L + 
Sbjct: 365 FGGNGYMAEYRVEQLARDAKSLMIYAGSNEIQVTHVAKGLLRA 407


>gi|156742829|ref|YP_001432958.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234157|gb|ABU58940.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 557

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/429 (15%), Positives = 135/429 (31%), Gaps = 51/429 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+H       +  +        R +       L     +  +      + +  T    K 
Sbjct: 65  GIHLLFIPEEYGGLGGGAYDIYRVSEAMAAIDLGIATGVLATFLGTDPITVGGTEEQKKY 124

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----GIYCL 228
           W  +I              +  + +  G TE + G+D+A +T++   + +     G    
Sbjct: 125 WMGRI-------------AEEGLLVAYGATEPQAGSDLATLTTKAVPVVEDGKVIGYKIS 171

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W  +  ++  + +LA   G      +   + +    G    + ++K G R++ T  
Sbjct: 172 GRKQWISNGGVAKIYTILANAPG-----GISWFIVEHDAPGFTKGKPEDKHGIRASNTAA 226

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L     F      + G           +     L      +     ++  AI YA+ R  
Sbjct: 227 LFLDEVFVPADRLVGGVEGKGLAQAAAVFGYTRLMVGSFGLGAGWEAMRRAIRYAQTRIQ 286

Query: 345 SGGILIDQPVMKRAI-ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            G  L  Q  +   +       + AA      +A + D    + +          + KY 
Sbjct: 287 GGKPLSQQQGLTHKLIVPNVARLEAARHYIEWVAETIDGGNDQQQ------TEGAVAKYM 340

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-----LL 458
             +       +A++  GG GY +E  + +  R+     I  G+   M   +        L
Sbjct: 341 ATEAGNKAAEDAIQVHGGYGYTKEYMVEKIKRDVRITCIYEGTSEIMEWTIARDRWQFHL 400

Query: 459 EKGTNLFEQLFSTLEQ-----------DLGSSGKKVITIL-RDSISLCKEDKGLARFLTE 506
           +     +    + +EQ               +   +  +L R  I     ++ +   L E
Sbjct: 401 KTKGAYYHDWAARVEQVHQREPNNGANVAALAMHALANVLERARIDRLTRNQHILFRLGE 460

Query: 507 KIALASSAA 515
            IA A +AA
Sbjct: 461 LIAWAETAA 469


>gi|119604731|gb|EAW84325.1| glutaryl-Coenzyme A dehydrogenase, isoform CRA_b [Homo sapiens]
          Length = 428

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 121/320 (37%), Gaps = 34/320 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I        +L    D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLGLHACLQLGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILL 444
            +E  + RH     A +   
Sbjct: 395 SDEYHVIRHAMNLEAVNTYE 414


>gi|158521615|ref|YP_001529485.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510441|gb|ABW67408.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 387

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 119/286 (41%), Gaps = 15/286 (5%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           ++  +A+ TT      +  ++ S          + +  +   + LTE  GGTDI  A+ +
Sbjct: 83  TSVALAIGTTIGFGTRFIAELGSTSQKEELLPKICEGKLRFCMALTEPGGGTDILGAVQT 142

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQR 274
             ++  D  + L+G K F++   ++D FI + + +        +   L   +  G+   R
Sbjct: 143 CAEEKED-RWVLNGEKVFITGAHVADYFITICRTDPDNKPSKSLSTFLVPANAKGISITR 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
           +  KI      +V + F+N        L     G  E + +L    +  A+M V  +  +
Sbjct: 202 IP-KISCHHCDSVGISFNNVEIPKENILGTRGNGWFEMLTVLNPERIGVAMMGVGLIAAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A  YAR+R   GG +     ++  +AD+ +++  +  ++++ A   D  +    EA 
Sbjct: 261 YEYAFDYARKRQAFGGPISRFQSLQHYLADMYINLENSRNITYKSAWLCDNGQPYHMEAT 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            A+++A          A     +  E +GG G   E  + R  R++
Sbjct: 321 MAKVIAA-------DGALHATIKGAEILGGYGICNEYPMQRFLRDA 359


>gi|88856950|ref|ZP_01131601.1| butyryl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
 gi|88813826|gb|EAR23697.1| butyryl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
          Length = 387

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 133/397 (33%), Gaps = 37/397 (9%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++ AR  A      L       +  ++    P    L +R+   GL    +D  +  
Sbjct: 20  EEFRQSARAFAEREVAPLV------DEAERTSTFPV--QLFKRAGDLGLLGLQFDPEWGG 71

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                   +                    V +     L    ++   +  +  S E    
Sbjct: 72  AGAGLLPDLIFREE------------VSRVCAGIAAGLGIQGQIGTAYLARHGSSEQKDR 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-M 245
              P     +     LTE   G+D+ AI ++  +  D  + L+G K F+++  +   I +
Sbjct: 120 WLRPALAGDLITAWALTEPDAGSDVRAIRTRVSRDGD-TFILNGRKTFITNGPTAGAIGV 178

Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD 301
           +A+       F V   + +    G   +R+  K+G RS+   EL F N        L   
Sbjct: 179 VARQSDDR--FAV--FVVEAGDEGFECERVLEKLGCRSSQVGELVFDNVRLDESRRLSPP 234

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
              S   + D+ I   +  A  S+     +    + YA+ R   G  +     +    A+
Sbjct: 235 EGSSIEAILDVLIRGRVLIAAASLGVASAAFDMGLAYAKEREAFGRPIGRFQEISMKFAE 294

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
               IAAA  L++R A+  D   +               K    + A  V+ + M   GG
Sbjct: 295 ADARIAAARLLTYRAAHLCDTRDAVP------IRECAQAKLIASETALWVVDQMMRVFGG 348

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G++    I R YR+     I+ G+       +   L
Sbjct: 349 MGFMRGSPIERLYRDVRYFQIVEGTTEIQHRILAKEL 385


>gi|91211231|ref|YP_541217.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|91072805|gb|ABE07686.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89]
          Length = 342

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 125/358 (34%), Gaps = 28/358 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G   +   + +               +         +L++ +   ++++  + +   
Sbjct: 9   AQAGYLGASIPQKYGGRGYDSYQLCALHEVMAGVHGSLENLITVTGMVSTLLQRVGSAAQ 68

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E             +   + LTE   G+D+  + ++ Q+  DG      
Sbjct: 69  KAHYLPKLATGE-------------LIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGK 115

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            KW     ++D FI+L     +     +  +L D + +G     L + +G R N   EL 
Sbjct: 116 KKWITLGQIADFFIVLIHCGNQ-----LATVLIDRNTDGFTITPLNDMLGLRGNMLAELH 170

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F++        L   T  V              +A  S+   R ++  A  Y R+R    
Sbjct: 171 FNDCRLKEDALLGPLTPGVPLAVNFALNEGRFTTACGSLGLCRAAVDVAARYIRQRKQFK 230

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +++   A +     +A  + F  A   +         A       + KY   K
Sbjct: 231 RRLFSHGIVQHLFATMLTQTRSAQLMCFSAAEYRETLHP-----AM-INQILMAKYVASK 284

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            A  V  +A++ +G +G   + ++ R+YR++    I+ G+     + +      G+  
Sbjct: 285 AAVDVAGKAVQLLGANGCHADYAVERYYRDAKIMEIIEGTSQIHEIQIAMNYMMGSEA 342


>gi|195343044|ref|XP_002038108.1| GM17931 [Drosophila sechellia]
 gi|194132958|gb|EDW54526.1| GM17931 [Drosophila sechellia]
          Length = 419

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 130/386 (33%), Gaps = 39/386 (10%)

Query: 81  TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
             +L        R +  +       ++      G+            V   A+ +    +
Sbjct: 57  QAELQPRVKMANRLETFD-----KKIMEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREV 111

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +       +   S  +   +    +    + + P              M +  +    
Sbjct: 112 ERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPS-------------MAEGKLIGAF 158

Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257
           GLTE   G+D A + ++ +  S    Y L+G K W  S+P++D  ++ A+ E G+V  FL
Sbjct: 159 GLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIADVIVVWAKCENGKVRGFL 218

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V R +   S  GL   +++ K   R++ T  +            L    G          
Sbjct: 219 VDRKI---SGKGLETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFS---GPFSC 272

Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L++A   ++   +  AE     A  Y   R   G  L    ++++ +AD   +IA     
Sbjct: 273 LNNARYGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIALGLQA 332

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
              +    D+     +       M  + K      +  +  +  + +G +G  +E  + R
Sbjct: 333 CLHVGRLKDQKLHTPD-------MISLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIR 385

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
           H     + +   G+ +   L +   +
Sbjct: 386 HVINLESVNTYEGTHDIHALILGRAI 411


>gi|256396544|ref|YP_003118108.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362770|gb|ACU76267.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 417

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 141/386 (36%), Gaps = 27/386 (6%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
            + PA   L RR+         ++   E         I               +  P   
Sbjct: 4   RYTPAQQDLKRRAADYVKLLIQYEDQAEQARGALPKSIVRELTLAAMDAGVYAINMPVEW 63

Query: 158 SASMVALMTTPRVHKD------------WAPKIF----SREYDPTNKAPMQKTSVAIGLG 201
               ++L+    V ++            W P       + E       P+ +        
Sbjct: 64  GGPGLSLLEQVIVEEEFGKATNCLWDIPWRPSNVLAYGTPEQREKYLLPIIRGEKFDAFA 123

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGC-FL 257
           +TE   G+D ++  +   + + G + L+G KWF++      F+++   A VEG  G   L
Sbjct: 124 VTEPEAGSDPSSGVTVATRTAGG-WLLNGEKWFVTCGDIADFLLVQADAIVEGAQGPEKL 182

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
                 D +  GL   R+ + + +  N   E   ++ F     +LGD+       ++   
Sbjct: 183 ATLFFVDKNAPGLEMTRVPHFMHHAVNGHPEFTLTDVFVADEDVLGDVGEGYELTKEWFT 242

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L  A  +V     +L+EA  +A RR   G  + +  +++  +AD A+DIA   A + 
Sbjct: 243 DERLMIAARTVGAAERALSEARDWAVRRQAFGQPIAEFQLIQGMLADCAVDIAVNRAYTH 302

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           ++A   D+  +  +        A   K    + A  V    ++  GG GY    ++ R +
Sbjct: 303 QVAWEADQPDTDRKT---LHAKASTAKLAASEAAGRVADRCVQIFGGRGYDSAFAVERIF 359

Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460
           RE   + I  G+     + + N L K
Sbjct: 360 RELRVDRIWEGTSEIQRVIIANELIK 385


>gi|148657017|ref|YP_001277222.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569127|gb|ABQ91272.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 545

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 131/429 (30%), Gaps = 51/429 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+H       +  +        R +       L     +  +      + +  T    K 
Sbjct: 53  GIHLLFIPEEYGGLGGGAYDIYRVSEAMAAIDLGIATGVLATFLGTDPITVGGTEEQKKY 112

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----GIYCL 228
           W  +I              +  + +  G TE + G+D+A +T++   + +     G    
Sbjct: 113 WMGRI-------------AEEGLLVAYGATEPQAGSDLATLTTKAVPVVEDGKVIGYKIS 159

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W  +  ++  + +LA   G      +   + +    G    + ++K G R++ T  
Sbjct: 160 GRKQWISNGGVAKIYTILANAPG-----GISWFIVEHDAPGFTKGKPEDKHGIRASNTAA 214

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L     F      + G           +     L      +     ++  AI YA+ R  
Sbjct: 215 LFLDEVFVPADRLVGGVEGKGLAQAAAVFGYTRLMVGSFGLGAGWEAMRRAIRYAQTRIQ 274

Query: 345 SGGILIDQPVMKRAI-ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            G  L  Q  +   +       + AA      +A + D    + +          + KY 
Sbjct: 275 GGKPLSQQQGLTHKLIVPNVARLEAARHYIEWVAETIDGGNDQQQ------TEGAVAKYM 328

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-----LL 458
             +       +A++  GG GY +E  + +  R+     I  G+   M   +        L
Sbjct: 329 ATEAGNKAAEDAIQVHGGYGYTKEYMVEKIKRDVRITCIYEGTSEIMEWTIARDRWQLHL 388

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR------------FLTE 506
           +     +    + +EQ           +   ++         AR             L E
Sbjct: 389 KTKGAYYHDWAARVEQAHQREPNNGANVAALAMHALANILERARIDRLTRNQHILFRLGE 448

Query: 507 KIALASSAA 515
            IA A +AA
Sbjct: 449 LIAWAETAA 457


>gi|34495232|gb|AAQ73463.1| acyl-CoA dehydrogenase [Rhodococcus sp. NCIMB 9784]
          Length = 378

 Score =  198 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 135/375 (36%), Gaps = 36/375 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P      ++    G    +    +  +                  L+    
Sbjct: 30  RKHDEAREFPE--EAYQKIADRGWLGLLIPEQYGGLEADPVMYAIFCEAIAKYSLDFAAA 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  S+ +A+ +A   T    + + P                +  +   + +TE   G+D 
Sbjct: 88  IMTSMFTATNIAFHGTDEQRQKYLPDF-------------MEGKIKFSISITEPNAGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM--SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           A + ++  +  D  + ++G+K F S          ++A+         +  +L   +  G
Sbjct: 135 AGLRTRAVQDGD-SWIINGNKVFCSGAHLPGTVIAVMARTSEDK-HKGLSMILVPNTTEG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSG- 327
           +  ++L + I  RS  T E+ F++    +    N+   P +    +  +L+   +S++  
Sbjct: 193 VDVRKL-DTIVRRSLGTTEIFFTDARVPV---ENIIGQPGDGWTVVGSHLEWERLSLAAT 248

Query: 328 ----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R +L + I Y + R   G  L    V+K  +A+   ++ AA  L +  A      
Sbjct: 249 YVGNARTALDDTIRYTKDRTQFGRPLSSFQVLKHRMAEDECEVEAARLLVYSAATKLARG 308

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +   +E + A       K +  K A  V    M+ +GG   + E  + R++RE+    + 
Sbjct: 309 EKALKEVSMA-------KVFAAKTAFRVATNGMQALGGYATLPEYDMERYFREAKHGMVG 361

Query: 444 LGSGNAMVLDVLNLL 458
            G+       +   +
Sbjct: 362 GGTNEIQHSIIAKQM 376


>gi|226360736|ref|YP_002778514.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239221|dbj|BAH49569.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 395

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/408 (17%), Positives = 133/408 (32%), Gaps = 31/408 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           V    ++ LA              P   R +  E  P    ++      G    +  R +
Sbjct: 9   VGITESEYLALRDRIFEAIWSELDPLERRIEDEEQVP-HDIVMPILTRIGALGLLVPREY 67

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  A  +     +   Q     ++    + A  ++ +   +      P   +    
Sbjct: 68  GGSGLSIAQYLPIIAEFAKVQGGLRVIVHVHNSFAHALSEIGNEQQRAAVLPGAATG--- 124

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAF 243
                       ++   LTE   GT  A + S   +  D  Y ++G KW   +S ++  F
Sbjct: 125 ----------RDSVAFALTEPGFGTG-ADLGSTAVRNGDE-YVITGEKWLITNSDIASHF 172

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLG 300
           I+ A+         V   L   +  GL    L   +G +      +   +       L+G
Sbjct: 173 IVFAKTTDSE----VSAFLVPRNTEGLSIAALPETMGCKGTEHGRVTLDSVRVPATALVG 228

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
                   +E    +  +  A  S+     +L  +I +A+ R   G  +  +  ++R +A
Sbjct: 229 AEGQGNEHLERALEISRVFIAASSLGTSERALELSIAHAKSRVTFGKPIGTRQAIQRYLA 288

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           ++A D+ A   +    A  +D  +    EA+         K +  +    V   A+   G
Sbjct: 289 EMATDVYALRGILADAARKWDAGERIPAEASM-------CKLFGLEAVGRVTDRALLVHG 341

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           G GY     I R YR++  N +  G+     L   + L  G    +  
Sbjct: 342 GIGYTRAHPIERLYRDARLNWLEEGTPTIQYLVAASQLLDGYAYSDAF 389


>gi|84495516|ref|ZP_00994635.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84385009|gb|EAQ00889.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 398

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 113/357 (31%), Gaps = 23/357 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R    GL     +          A+ +  A L  +       +      +   + 
Sbjct: 56  RELAPRLGELGLLGMHLEGYGCAGTSATAYGLACAELEAVDSGVRSLVSVQGSLAMFAIW 115

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ + E                  GLTE   G++ A + ++ ++  +
Sbjct: 116 QFGSEEQKQEWLPRMAAGE-------------AIGCFGLTEPDFGSNPAGMRTRARRDGE 162

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D  ++ A+ +   G   +   +   S  G     +  K+  R+
Sbjct: 163 DWVLDGSKMWITNGSVADVAVVWARTDAGDGE-TIRGFVVPTSTPGFSAPEITGKLSLRA 221

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL            L  + G    +  L          ++   R +L   I Y   
Sbjct: 222 SVTAELVLEGVRLPASAMLPEARGLSGPLSCLSEARFGIIFGALGAARDALETTIAYTLD 281

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R +    L    + +  +AD+ L++     L+  L    D    R E+         + K
Sbjct: 282 RDMFDKKLAGYQITQTKLADMTLELGKGMLLALHLGGLKDAGTLRPEQ-------VSLGK 334

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              C+ A  +  E    +G +G   E S  RH     +     G+     L +   L
Sbjct: 335 LNSCREAIKIARECRTLLGANGISGEYSPMRHANNLESVLTYEGTSEVHQLVIGQAL 391


>gi|89901161|ref|YP_523632.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118]
 gi|89345898|gb|ABD70101.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118]
          Length = 618

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 98/552 (17%), Positives = 185/552 (33%), Gaps = 95/552 (17%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +         R+ +   P+           D+V    A H   +     G+  +  D 
Sbjct: 42  ERIAREKYAPFNRLVDTQEPRFDG--------DQVILPQATHDAQKAYAESGMLSAAQDF 93

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +      +  A   + MA +  G  M  S  +A+++ +  TP   + +A   F   
Sbjct: 94  EHGGMQLPYTIEAAANAFFAMASVSIGSGM-LSTGNANLLMVHGTPLQKEVFAKNEFCGR 152

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWF 234
           +  T             + L+E + G+ ++ + ++     +          Y L G+K +
Sbjct: 153 FSGT-------------MCLSEPQAGSSLSDVATRAMPDGEDYAQDPLGARYRLRGNKMW 199

Query: 235 LSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLED------GSPNGLCYQ 273
           +S+   +       ++LA++ G           +  F+VP+ L +      G  N +   
Sbjct: 200 ISAGDHELTENIIHLVLAKIPGPDGQLPTGTRGISLFIVPKKLVNEAGVLTGERNDVALA 259

Query: 274 RLKNKIGNRSNATVELEFSN------------------TFGFLLGDLNVSTGPVEDMKIL 315
            L +K+G R      L F                      G+L+G        +  M   
Sbjct: 260 GLNHKLGWRGTVNTLLNFGEGKYPVRSTGGGLDGKGAGAVGYLVGQPGEGLRCMFHMMNE 319

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS------GG-------ILIDQPVMKRAIADI 362
             +   I +          A+ YA+ R         G         +I+   +KR +   
Sbjct: 320 ARIGVGIAATMLGLAGYEAALDYAKTRPQGRPAGPAGKDATQPQVPIIEHADVKRMLLAQ 379

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAME 417
                 A AL    A   DE  S + EAA        ++ PI K W  +      + A++
Sbjct: 380 KSYCEGALALELYCARLVDEQHSGTPEAADEARLLLEVLTPIAKSWPSEWCLEANSLAIQ 439

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN---LFEQLFST 471
             GG GY  +  + +++R++  N I  G+     +D+L    L+E G     L  ++ +T
Sbjct: 440 VHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVLMESGRGLALLAGRIQAT 499

Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--IALASSAAALYRAGMNDIADVF 529
             Q               +      D   A + T +   ALA++   L   G   +A ++
Sbjct: 500 AAQAQQVPELAAHAAALTAAWQQVTDATRAAWATGQPGDALANAVPYLQAFGHTVLAWIW 559

Query: 530 LENRFLDNCHST 541
           L+          
Sbjct: 560 LDVALSAQRQDA 571


>gi|88856944|ref|ZP_01131595.1| Acyl-CoA dehydrogenase-like protein [marine actinobacterium
           PHSC20C1]
 gi|88813820|gb|EAR23691.1| Acyl-CoA dehydrogenase-like protein [marine actinobacterium
           PHSC20C1]
          Length = 409

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/296 (20%), Positives = 101/296 (34%), Gaps = 14/296 (4%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +   I + E       P+ +      L LTE   G D   I +   K +DG        W
Sbjct: 122 FLDSIATPEQRERYLYPLSRGEKTSALALTEPDAGADAGGIRTTATKTADGWEISGSKLW 181

Query: 234 FLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIG-NRSNATVELEF 291
              +   D FI++A  +  +     +   L D    GL   +    +G  R      L F
Sbjct: 182 ISWADTVDFFIVIALTDPIKRNRGGMTAFLVDSPIEGLEISKPIATMGEQRPFG---LFF 238

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                    +LG++  +  P+ +   +  ++     V   +  +     Y+  RH  G  
Sbjct: 239 DRVRVPDSAILGEVGEAFAPLTNRLGVRRVEIGARCVGMAQRLVDMMCQYSLERHTFGAP 298

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L ++  ++  IAD  +++ AA  +    A   D             + A   K    +M 
Sbjct: 299 LAERQAVQFMIADSVMELHAARLMVRDAAGMLDSGVKDIR------MEASTVKVQSTEML 352

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             V+  AM+  G  GY +E  I   YR S    IL G        +  L  K    
Sbjct: 353 SRVVDRAMQVHGAMGYSKELPIEFVYRNSRVLRILEGPSEIHRAQIAKLAIKERGA 408


>gi|307595746|ref|YP_003902063.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307550947|gb|ADN51012.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM
           14429]
          Length = 386

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 124/378 (32%), Gaps = 30/378 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+  ++P    ++R    +G+   I  R +            +  +        
Sbjct: 30  PVADKIDRENYYP--REVIRELGKNGVLAPILPREYGGYGMDVLGTALSIEIISRYSGSM 87

Query: 149 GHLMSP-SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G L                  ++ ++  PK+   E             +     L+E   
Sbjct: 88  GILTEVQGFLVTDAFYTYGNKQMKEELVPKLARGE-------------LIGSFALSEPCC 134

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266
           G+D AAI ++ ++            W      +D +++  +          +   L   +
Sbjct: 135 GSDAAAIETRAERRGGEWVINGKKMWITQGLYADVYLVFTRTGPKEARHRAITAFLVRRN 194

Query: 267 PNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDL---NVSTGPVEDMKILIYLDSAI 322
               C +    + +G R   T EL F++        +   N       +      +  A 
Sbjct: 195 K---CIEANPIHVMGIRGTGTSELTFNDCVVGDDDVVGKINEGFKIAMEALNQGRIAVAS 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +++     +L EA+ + R R      + +   ++  +AD+   I    ++ +  A  FD 
Sbjct: 252 VTLGLAEAALMEALEWVRNRRAFDQPMTNLEWIQFQLADMMAYIETMRSIVYDAALHFD- 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              R  E  YA   A I K     +   VI  A++  G  G      + R YR++    I
Sbjct: 311 ---RKYEDYYA--FASIAKLTSVLLGMDVIRRAVQLTGAYGVWSNSKLNRIYRDAKLMEI 365

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+     + +   L K
Sbjct: 366 GEGTNEVQRMVIYKWLSK 383


>gi|166712673|ref|ZP_02243880.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 391

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 125/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L      GL  +    R     +   ++ +    L         
Sbjct: 43  GDAFDAGRFPREWIPDL---AELGLLGASLPVRDGGAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    +    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRMIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKMWITNGSIAGLAIIWAHTDD-----GVRGFLVETDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
                + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALTYAGERILFGRPLAATQSAQIKLADMARGISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|300741381|ref|ZP_07071402.1| acyl-CoA dehydrogenase [Rothia dentocariosa M567]
 gi|300380566|gb|EFJ77128.1| acyl-CoA dehydrogenase [Rothia dentocariosa M567]
          Length = 386

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 140/396 (35%), Gaps = 35/396 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
              EL R A       H   P    W++    P   ++ + +   G+        F    
Sbjct: 9   EDHELFREAVREF-VAHEITPHYPEWEQAHIMP--RSVWQAAGEAGVLGLAVPEEFGGAQ 65

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDP 185
                        L      G  ++  +        +    T    + W P++ S     
Sbjct: 66  LPDYEYQLVLTQELATVGGYGFALAVHLQQDLVLPYLLAYGTHEQKERWLPQMVSG---- 121

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244
                     +      TE   G+D+ A  +   +  +  Y L+G K F+ S +S DA +
Sbjct: 122 ---------DLVTSCAFTEPGAGSDLRACRTSAVRDEN-SYLLNGQKTFIGSGISGDAAL 171

Query: 245 MLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
           +LA+ +G   R           + S +G    R  +KIG R++ T EL F N       L
Sbjct: 172 VLARTDGSSERASEDSFSLFFVEKS-DGYAPGRQLDKIGIRASDTAELFFENVRVPAENL 230

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       ++       L  A  S    R +L   + Y + R V G  + D    +  
Sbjct: 231 IGEPGQGLTYIKQHLPQARLAIAAASAVISRTTLNATLEYVKERKVFGSRVADFQNTRFE 290

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A+  ++   +     R   +F+  +  +E+AA A       K +  + A  +    ++ 
Sbjct: 291 LANALMNTELSELYVARSIAAFNAGELTAEDAAKA-------KVFASEKACTITDRCLQL 343

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            GG GYI E  +A+ +  +    I  G+   +  ++
Sbjct: 344 FGGYGYINEHPVAQAFLAARLLPIFGGTNELLRDNI 379


>gi|26248316|ref|NP_754356.1| putative acyl-coa dehydrogenase [Escherichia coli CFT073]
 gi|26108720|gb|AAN80923.1|AE016762_176 Putative acyl-coa dehydrogenase [Escherichia coli CFT073]
          Length = 342

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 125/358 (34%), Gaps = 28/358 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G   +   + +               +         +L++ +   ++++  + +   
Sbjct: 9   AQAGYLGASIPQKYGGRGYDSYQLCALHEVMAGVHGSLENLITVTGMVSTLLQRVGSAAQ 68

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E             +   + LTE   G+D+  + ++ Q+  DG      
Sbjct: 69  KAHYLPKLATGE-------------LIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGK 115

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            KW     ++D FI+L     +     +  +L D + +G     L + +G R N   EL 
Sbjct: 116 KKWITLGQIADFFIVLIHCGNQ-----LATVLIDRNTDGFTITPLNDMLGLRGNMLAELH 170

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F++        L   T  V              +A  S+   + ++  A  Y R+R    
Sbjct: 171 FNDCRLKEDALLGPLTPGVPLAVNFALNEGRFTTACGSLGLCQAAVDVATRYIRQRKQFK 230

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +++   A +     +A  + F  A   +         A       + KY   K
Sbjct: 231 RRLFSHGIVQHLFATMLTQTRSAQLMCFSAAEYRETLHP-----AM-INQILMAKYVASK 284

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            A  V  +A++ +G +G   + ++ R+YR++    I+ G+     + +      G+  
Sbjct: 285 AAVDVAGKAVQLLGANGCHADYAVERYYRDAKIMEIIEGTSQIHEIQIAMNYMMGSEA 342


>gi|54400550|ref|NP_001006024.1| glutaryl-Coenzyme A dehydrogenase, like [Danio rerio]
 gi|53734644|gb|AAH83397.1| Glutaryl-Coenzyme A dehydrogenase, like [Danio rerio]
 gi|182891166|gb|AAI64011.1| Gcdhl protein [Danio rerio]
          Length = 427

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 108/298 (36%), Gaps = 34/298 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    T    + + P++   E             +    GLTE   G+D  ++
Sbjct: 147 SSLVMHPINAYGTEEQKQKYLPRLAQGE-------------ILGCFGLTEPNHGSDPGSM 193

Query: 215 TSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            ++ +  S            W  +SP++D  ++ A+ E       V   + +    GL  
Sbjct: 194 ETKAKYNSSSHTFTLTGSKTWITNSPVADICVVWAKCEDGK----VRGFILERGMKGLST 249

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +++ K   R++AT  +            L  ++G          L++A   ++   +  
Sbjct: 250 PKIEGKFSLRASATGMIIMDEVEVPEENLLPKASGLAGPFG---CLNNARYGIAWGALGA 306

Query: 333 AEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           AE   +A R     R   G  L    +M++ +AD+  +I        +L    D+ K+  
Sbjct: 307 AEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLTEITLGLQSCLQLGRLIDDKKA-- 364

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                A  M  + K   C  A  +  +A + +GG+G  +E  I RH     A +   G
Sbjct: 365 -----APEMISLLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVLNLEAVNTYEG 417


>gi|225556405|gb|EEH04694.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 483

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/291 (24%), Positives = 112/291 (38%), Gaps = 19/291 (6%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           K  ++E        + K       GLTE   G+D  ++ +  +      G Y +SG K W
Sbjct: 196 KFGTQEQKDKYLLDLAKGKKLGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTW 255

Query: 234 FLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELE 290
             +SP+SD F++ A++E  G++  F++ R   D  P G      +KNK   R++ T  ++
Sbjct: 256 ITNSPISDYFLVWAKLESVGKIKGFIIER---DSCPPGTFETPVIKNKTALRASITGMIQ 312

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GG 347
             +        L    G V     L    L  A  S+  +   +  A  YA  R    G 
Sbjct: 313 MDSCPVPETNMLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGN 372

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD A D A  T  +  +A   DE KS  E       M  I K   C  
Sbjct: 373 PLAKYQLVQKKLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDR 425

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 426 ALVGARTLQEIFGGNAVGDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAI 476


>gi|162447963|ref|YP_001621095.1| acyl-CoA dehydrogenase [Acholeplasma laidlawii PG-8A]
 gi|161986070|gb|ABX81719.1| acyl-CoA dehydrogenase [Acholeplasma laidlawii PG-8A]
          Length = 375

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 120/363 (33%), Gaps = 37/363 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  + +  G    I  + F         + +               +     +   + 
Sbjct: 39  KTLWDKIVETGFLGLIVPKEFGGADFDPVAEAQTIFDVASNSASVAFTLEGHYKTVDQLK 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 + + + P+   R                 G G TE +GG+++   T+   K  D
Sbjct: 99  KYGKASLKEKYLPEANKR---------------IFGFGSTEPQGGSNVMGHTASAVKEGD 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                       +  +++ +++L +  E  + CFLV     D    G  Y + ++  G R
Sbjct: 144 YWILNGNKTMITNGGLAEVYLVLLKTAENELTCFLV-----DKDMPGFKYGKQEDFFGMR 198

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDSAIMSVSGMRVSLAEAI 336
                E+   N       D  +     E + I         ++   ++    + +L   +
Sbjct: 199 GTPVGEIFLENVKV---TDEYMLGKIGEGVMIGDSAHYDARINMGAIAAGICQHALDIVL 255

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R      +ID   ++  I +IA+       L    A    + K   +       +
Sbjct: 256 DYATERKAIDKPIIDLFSIQNKITEIAIAKENTQLLYEEAAKLKSQGKPYDK-------V 308

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           + + K +  + A      A++ +GG GY  E  +    R++ A  I  GS   MV+++  
Sbjct: 309 STMAKSYGSRAAFTSCDHALQVLGGYGYSNEYPVEHLLRDARALQIAEGSLEKMVIEIAK 368

Query: 457 LLE 459
            ++
Sbjct: 369 SVQ 371


>gi|240276621|gb|EER40132.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H143]
 gi|325095334|gb|EGC48644.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 428

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/291 (24%), Positives = 112/291 (38%), Gaps = 19/291 (6%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           K  ++E        + K       GLTE   G+D  ++ +  +      G Y +SG K W
Sbjct: 141 KFGTQEQKDKYLLDLAKGKKVGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTW 200

Query: 234 FLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELE 290
             +SP+SD F++ A++E  G++  F++ R   D  P G      +KNK   R++ T  ++
Sbjct: 201 ITNSPISDYFLVWAKLESVGKIKGFIIER---DSCPPGTFETPMIKNKTALRASITGMIQ 257

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GG 347
             +        L    G V     L    L  A  S+  +   +  A  YA  R    G 
Sbjct: 258 MDSCPVPETNMLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGN 317

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L    ++++ +AD A D A  T  +  +A   DE KS  E       M  I K   C  
Sbjct: 318 PLAKYQLVQKKLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDR 370

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 371 ALVGARTLQEIFGGNAVSDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAI 421


>gi|298155806|gb|ADI58834.1| medium-chain acyl-CoA dehydrogenase [Chiloscyllium plagiosum]
          Length = 230

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 19/232 (8%)

Query: 234 FLSSPMSDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +   ++ + +LA+ +              + D    G+   R +  +G R + T  + 
Sbjct: 1   ITNGGQANWYFLLARSDPDPKASAGKAFTGFIVDADSPGIQIGRKEMNMGQRCSDTRGIV 60

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           F +         NV  G     KI +          A  +V   + +L EA  YA  R  
Sbjct: 61  FEDVRVP---KENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEATKYALERKT 117

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G +L     +   +AD+AL +  A     R A   D+ +  +         A I K + 
Sbjct: 118 FGRLLAQHQAVSFMLADMALKVELARLGYQRAAWEVDQGRRNT-------YYASIAKAFA 170

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +A  V ++A++  GG+G+  E  + +  R++    I  G+     + +  
Sbjct: 171 GDIANQVASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRVIIAR 222


>gi|119716086|ref|YP_923051.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119536747|gb|ABL81364.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 608

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/546 (17%), Positives = 193/546 (35%), Gaps = 86/546 (15%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
           A+       +L      + +   +   R+ + + P        G      E   AW+A  
Sbjct: 32  ADHDRGGIDDLLRAAADIAAEKYEPANRIIDDHEPVFDD----GRVVLPKETAEAWNAF- 86

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
              +  G   +  D     +   +     A  ++  A +     +     +A ++     
Sbjct: 87  ---VEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAASIGISPAVLTEANAALLLT-YGN 142

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-- 225
               + +A +  +  +  T             + L+E + G+ ++ IT++     DG   
Sbjct: 143 RLQRELFAARELTGRWTGT-------------MCLSESQAGSSLSDITTRAVPEPDGADD 189

Query: 226 -----YCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLEDG 265
                Y L+G+K ++S+   D       ++LA+  G           +  F+VP+ L D 
Sbjct: 190 PLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLFVVPKFLVDT 249

Query: 266 -----SPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTGPVE 310
                  N +    L +K+G R      L F +            G+L+G+       + 
Sbjct: 250 AGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGEPGQGLRQMF 309

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGG-------ILIDQPVMKR 357
            M     ++  + + +      A ++ YA+ R        SG         L++   +KR
Sbjct: 310 HMMNAARIEIGLGAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVPLVEHADVKR 369

Query: 358 AIADIALDIAAATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +           AL    A   DE      +  +E      I+ P+ K W  +      
Sbjct: 370 MLLAQKAYAEGGIALGLYAARLLDEQATGTPEQVAEAGRLLEILTPVVKSWPSEWCLEAN 429

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF---E 466
           + A++ +GGSGY  +  + +++R++  N I  G+     LD+L     LE G  L    E
Sbjct: 430 SLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEGGAYLAAQGE 489

Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK--IALASSAAALYRAGMND 524
           ++ +T+ +   +  +     L  +     +    A + T     ALA++   L   G   
Sbjct: 490 RVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEA-WSTGDPEDALANATPYLQGFGHVV 548

Query: 525 IADVFL 530
           +A V+L
Sbjct: 549 LAWVWL 554


>gi|294633001|ref|ZP_06711560.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830782|gb|EFF89132.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 385

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 131/377 (34%), Gaps = 36/377 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGH 150
            + D+   +P  +    +    G    +              + + A  L       A  
Sbjct: 31  RKCDQERQYP--YEAYAKIARQGWLGILIPEEEGGSGGDIFDYSLMAEGLGKFGFDFACS 88

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++ P+ T+ +++    T      +       E                 + ++E   G+D
Sbjct: 89  VLVPTFTAMNIIK-FGTAEQKAKYVKPFIDGEIR-------------FSVSISEPEAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGCFLVPRLLEDGSPN 268
            +   +  ++  +G + ++G K + S   +D  ++  L + +       +  LL      
Sbjct: 135 ASNTKTHARRDENGDWIVNGSKLWCSGAAADDTVIAMLVRTDNADKHGGLSVLLIPNDTP 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG 327
           GL  ++L   +   +  T E+   +         N+     +  KI+  +L+    +V+ 
Sbjct: 195 GLDIRKLPT-LSRHATGTTEIFLDDVRVP---GENLLGEVGQGWKIITDHLELERCAVAA 250

Query: 328 MRVS-LAEAI----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
                  EA+     YA++R   G  + +  V+K  +A+    + AA  L +R A    E
Sbjct: 251 AYTGNAQEAVNAANRYAQQRIQFGKPIYEFQVLKHMLAENQTRVDAARLLCYRAARMKAE 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               + E         + K +  +       + M+ +GG   + E  + R+ RES  ++I
Sbjct: 311 GLPAARE-------TSMAKLYGSETLKQCALDGMQILGGYANLPEADMERYLRESVQSTI 363

Query: 443 LLGSGNAMVLDVLNLLE 459
             G+       +   + 
Sbjct: 364 GGGTSQIQRTIIAKSMR 380


>gi|294886029|ref|XP_002771522.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239875226|gb|EER03338.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 412

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 120/323 (37%), Gaps = 26/323 (8%)

Query: 143 MAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           MA+ E    ++S    +   +       + +   P++ S E               I LG
Sbjct: 103 MARAECYPRMISIDSMALPPLIKYGPAHLREKLVPQVVSGEKH-------------IALG 149

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+D+A I +   K  D        KW ++  +   +I LA   G  G   +  L
Sbjct: 150 ITEPTAGSDVAQIKTTAVKRGDEYVVNGQKKW-ITGGLIADYITLAVRTGSEGMNGISLL 208

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
             D    G+  + L   +G+    +  + F +       L+G  N     + +      L
Sbjct: 209 CVDMKSPGITVRGLPT-MGDTDLKSTFVTFDDVRVPAENLIGVENGGFIALMENFNHERL 267

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A+ +  G R   + A+ +A +R   G  LI+  V++  +A++A  + +       +  
Sbjct: 268 LIAVGAARGARRCYSLALKHAMKRKTFGKKLIEHQVIRYKLAEMARMVESLWTEVEHVGL 327

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYR 435
            F +     +  A       I K    K       EA++  GG+G   E     + R YR
Sbjct: 328 QFKQRVPDRQLGA----DCAILKVNASKAFEYCAREAVQIFGGAGVTREGQGRYVERLYR 383

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
               ++I  GS   ++   + ++
Sbjct: 384 SVRLSAIPGGSEEILLDLTMRMV 406


>gi|209515684|ref|ZP_03264548.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209503920|gb|EEA03912.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 400

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 61/347 (17%), Positives = 118/347 (34%), Gaps = 25/347 (7%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           +     +    P          A  L  +    A      S  +   + L  +    + W
Sbjct: 69  IVGIGVEGYGCPGGSVLLGGFIAMELARVDASIATFYGVQSGLAMGSIYLGGSEEQKQKW 128

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKW 233
            P             PM +       GLTE   G+     + +  ++  D        +W
Sbjct: 129 LP-------------PMVRLEKVGCFGLTEPLVGSGAGGGLLTTAKRAGDTWVLNGQKRW 175

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +SP  D  I+ A+            ++E+ +  G    +++ K+  R      +   N
Sbjct: 176 IGNSPWCDLSIIWARDVDDNQVKG--FIVENKTTPGFSVAKIERKVALRVVQNGVITLEN 233

Query: 294 TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                   L   +   +  ++L       A  +V     +   A+ YA+ R   G  +  
Sbjct: 234 CRVPEENRLQGDSSFRDTARVLRLTRQYVAWEAVGCSMGAYEHALKYAQTREQFGKPIAS 293

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +A +  +I A+  +  RLA   D+ K + E A+ A       K +C       
Sbjct: 294 FQLVQDLLAKMLGNITASQCMVVRLAQLQDQGKLKDEHASLA-------KAFCTVRMRET 346

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  A E +GG+G + + ++AR   +S A     G+     L V   +
Sbjct: 347 VGWAREVLGGNGIVLDYNVARFMADSEALYSYEGTREMNSLIVGKAV 393


>gi|15922104|ref|NP_377773.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15622892|dbj|BAB66882.1| 404aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 404

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 48/363 (13%), Positives = 117/363 (32%), Gaps = 33/363 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  R+   GL+       +          +  A                       + 
Sbjct: 54  KDLKERAKDLGLYGLDVPTEYNGQGADYLSLLVTAEELSRIWTSFSTFFLIQWMFNQAIL 113

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 + K +                  K         TE   G+D+A I S  +K++D
Sbjct: 114 KWGNESLKKRYLRD-------------TAKGEKIAAFCNTEPDAGSDVAGIKSTAKKVND 160

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             Y L+  K F+++   +D +++ A+    + +     +   + +         R++   
Sbjct: 161 H-YVLNARKMFITNGDVADYYLITARTSPPDPKAKWKGITVFIVEREWGVKTVSRIETT- 218

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI-----MSVSGMRVSLA 333
           G +++ T E+   +       + NV        K  +   D A       ++   + +  
Sbjct: 219 GLKASHTAEIMLEDVKVP---EENVLGEVDMGFKYAVESFDYARTIVSSQAIGIAQQAFE 275

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           + ++Y+ +R      L +  ++++ +++   D+  +  L++     +   + +       
Sbjct: 276 KLVNYSLQRTAFEKKLAEFELVQQKVSESLDDLETSRLLTYWAGTLYKRGRMQE-----Y 330

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
            I A + K+   + A  ++  AM   GG G      + R  R+        G+ +   + 
Sbjct: 331 IIAASLAKFHSTEAAERIVMRAMTVHGGYGVSVSTGLERLLRDLQILKTYEGTNDIQRIS 390

Query: 454 VLN 456
              
Sbjct: 391 AAR 393


>gi|110642145|ref|YP_669875.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|157145131|ref|YP_001452451.1| hypothetical protein CKO_00864 [Citrobacter koseri ATCC BAA-895]
 gi|191169992|ref|ZP_03031546.1| acyl CoA dehydrogenase [Escherichia coli F11]
 gi|227885554|ref|ZP_04003359.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|237704393|ref|ZP_04534874.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300985341|ref|ZP_07177407.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|300992175|ref|ZP_07179814.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|301051385|ref|ZP_07198199.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|306814907|ref|ZP_07449069.1| hypothetical protein ECNC101_22737 [Escherichia coli NC101]
 gi|110343737|gb|ABG69974.1| putative acyl-CoA dehydrogenase [Escherichia coli 536]
 gi|112292714|emb|CAJ76294.1| putative acyl-CoA dehydrogenase [Escherichia coli]
 gi|157082336|gb|ABV12014.1| hypothetical protein CKO_00864 [Citrobacter koseri ATCC BAA-895]
 gi|190909508|gb|EDV69093.1| acyl CoA dehydrogenase [Escherichia coli F11]
 gi|226900759|gb|EEH87018.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227837494|gb|EEJ47960.1| possible butyryl-CoA dehydrogenase [Escherichia coli 83972]
 gi|294492609|gb|ADE91365.1| acyl CoA dehydrogenase [Escherichia coli IHE3034]
 gi|300296979|gb|EFJ53364.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1]
 gi|300306550|gb|EFJ61070.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1]
 gi|300406844|gb|EFJ90382.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1]
 gi|305852301|gb|EFM52753.1| hypothetical protein ECNC101_22737 [Escherichia coli NC101]
 gi|307554020|gb|ADN46795.1| putative acyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|307626515|gb|ADN70819.1| hypothetical protein UM146_07120 [Escherichia coli UM146]
 gi|315286917|gb|EFU46334.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 110-3]
 gi|315290157|gb|EFU49538.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 153-1]
 gi|323956258|gb|EGB52004.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
          Length = 376

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 124/358 (34%), Gaps = 28/358 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G   +   + +               +         +L++ +   ++++  + +   
Sbjct: 43  AQAGYLGASIPQKYGGRGYDSYQLCALHEVMAGVHGSLENLITVTGMVSTLLQRVGSAAQ 102

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + PK+ + E             +   + LTE   G+D+  + ++ Q+  DG      
Sbjct: 103 KAHYLPKLATGE-------------LIGAIALTEPNIGSDLVNVETELQQDGDGWRLNGK 149

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            KW     ++D FI+L     +     +  +L D + +G     L + +G R N   EL 
Sbjct: 150 KKWITLGQIADFFIVLIHCGNQ-----LATVLIDRNTDGFTITPLNDMLGLRGNMLAELH 204

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F++        L   T  V              +A  S+   R ++  A  Y R+R    
Sbjct: 205 FNDCRLKEDALLGPLTPGVPLAVNFALNEGRFTTACGSLGLCRAAVDVAARYIRQRKQFK 264

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +++   A +     +A  + F  A   +                 + KY   K
Sbjct: 265 RRLFSHGIVQHLFATMLTQTRSAQLMCFSAAEYRETLHPA------MINQILMAKYVASK 318

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            A  V  +A++ +G +G   + ++ R+YR++    I+ G+     + +      G+  
Sbjct: 319 AAVDVAGKAVQLLGANGCHADYAVERYYRDAKIMEIIEGTSQIHEIQIAMNYMMGSEA 376


>gi|332976571|gb|EGK13412.1| acyl-CoA dehydrogenase [Desmospora sp. 8437]
          Length = 405

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 35/306 (11%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            TP   + +   IFS++  P                LTE   G+D++ I +  QK + G 
Sbjct: 114 GTPEQKERFLS-IFSKDEPPR----------WGAYALTEPEAGSDVSGIRTTAQKTTGG- 161

Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y L+G K F+++   +   ++ A ++  +G       + +    G    RL  K+G R++
Sbjct: 162 YILNGQKIFITNGARASWVVVFATIDRSLGRAGHRAFVVEKGTPGFSCTRLAKKMGIRAS 221

Query: 285 ATVELEFSNTFGFLLG-------DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            T EL   + F              N  +GP      +   D+    V+ M + +A A  
Sbjct: 222 ETAELLLEDCFVPEENLLGGESYYENRGSGPSGFRVAMKTFDNTRPIVAAMAIGIARAAF 281

Query: 338 Y-----ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                  R+ +   G L    +    +A   L+I AA  L++  A   D  +S ++EAA 
Sbjct: 282 EYTLDLVRKEYPKHGRLYH--LASEKLARAELEIEAARLLTWEAAWKADIGQSNAKEAAM 339

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                   K    K+A  V A  +E +G +G ++ + + + YR++    I  G+     L
Sbjct: 340 -------CKAHSGKIALEVCAGCLELLGPAG-LDGQIVEKLYRDAKIFDIFEGTNQVQHL 391

Query: 453 DVLNLL 458
                L
Sbjct: 392 ITARHL 397


>gi|170742695|ref|YP_001771350.1| isovaleryl-CoA dehydrogenase [Methylobacterium sp. 4-46]
 gi|168196969|gb|ACA18916.1| Isovaleryl-CoA dehydrogenase [Methylobacterium sp. 4-46]
          Length = 560

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 142/393 (36%), Gaps = 48/393 (12%)

Query: 92  ERWDKVEFHPAWHALLRR-----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
            R+ + E  P  H   ++               G+        +  +   +      +  
Sbjct: 186 RRFGQAEVVPHAHEWHQQNAYIPLEIIGQMAELGVFGLTIPEEYGGMGLPKISMCVVSEE 245

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
              A +  G L + S  +A ++    T    + + PKI S E  PT              
Sbjct: 246 LSRAYIGVGSLGTRSEIAAELILCGGTEAQKQRFLPKIASGEILPTAV------------ 293

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-VGCFLV 258
             TE   G+D+A + ++  +  D      G+K +++ P+ +D   +L + +    G   +
Sbjct: 294 -FTEPNTGSDLANLRTKAVREGDTWKVY-GNKTWITHPVRADLMTILVRTKPEEPGHRGL 351

Query: 259 PRLLEDGSPN---------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STG 307
             LL +             GL    ++  +G R     EL F          L      G
Sbjct: 352 SLLLGEKPRGSDAEPFPVAGLSGGEIE-VLGYRGMKEYELAFDGFEVPAANLLGEVEGKG 410

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             + M+      + +A  +V   + +L   + YA  R   G  L+  P +   +A +A++
Sbjct: 411 FAQLMQTFESARIQTAARAVGVAQSALDIGLRYAEERVQFGKPLVAFPRVADKLAMMAVE 470

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           IA A  L++  A+  DE K    EA  A+++A            A    A++  GG+G+ 
Sbjct: 471 IAIARQLTYFAAHEKDEGKRCDLEAGMAKLLAARVA-------WAAADNALQIHGGNGFA 523

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  I+R   ++   SI  G+       +   L
Sbjct: 524 LEYQISRVLCDARILSIFEGAAEIQAQVIARRL 556


>gi|256371495|ref|YP_003109319.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008079|gb|ACU53646.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 1146

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 113/505 (22%), Positives = 206/505 (40%), Gaps = 41/505 (8%)

Query: 32  IGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYN-TPQLHAYGP 89
            G++  + D ++   +A    +    ELE L    +S  A E+AR  + +  P+L A+  
Sbjct: 11  SGLDQLALDPVVERWLAARLSAARRSELEHL-NRTISADALEVARHVDRDAPPRLVAHDL 69

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D+ +  P   ALL R            R    +   +   + AA        + G
Sbjct: 70  DGNRIDRAQLAPTHVALLERL-----------RPMVALATTEPDGLLAALAAGYLLADPG 118

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              + ++T+   +AL        D AP         +  A +++         TE   G+
Sbjct: 119 LYCTITLTTQVSLAL-------ADLAP-------HHSATARLREGPWFGATWFTETHAGS 164

Query: 210 DIAAITSQGQKISDGIYCLSG-HKWF-LSSPMSDAFIMLAQVEG-----RVGCFLVPRLL 262
           D+ ++ ++  +  +G + +    K+F  ++ ++D  ++ A V        +G FLV R  
Sbjct: 165 DLGSLRARATQTPNGEWRIGTAEKFFASNAGLADVALVAAHVGEVRGVRSLGLFLVRREQ 224

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
            DGS      +RLK+K+  R+  T E++ ++    LL         + +   +  + +A+
Sbjct: 225 PDGSLA-FSVRRLKDKLATRAVPTGEVDLADAPAELLAAPPDGIHRILESLTIARVANAM 283

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +    R++LAEA    +RR   G  L+   +    +A +     A + L+F LA     
Sbjct: 284 SAAGIARIALAEATIRGQRRVAFGRPLLAHALFADELARLRASQLATSLLAFELAEETQS 343

Query: 383 ---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
              +          R  + + K    + A  V   AME  GG G++E+  IAR +RE+  
Sbjct: 344 SLGSHHGDRAYQILRARSHVAKVRTAEQAAFVTQRAMEAFGGLGFVEDAPIARWHREALV 403

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDK 498
             I  G+ +   LD   +L     + +     +   L GS GK++   +R + +   E  
Sbjct: 404 LPIWEGTPHVHALDAAEVLAD-RVVRDGFVERITAALDGSVGKRLGDAVRRTAAELAEAP 462

Query: 499 GLARFLTEKIALASSAAALYRAGMN 523
             AR L   +   S AAA+ R  + 
Sbjct: 463 TNARHLLTHLGALSEAAAVARLDLP 487


>gi|119477138|ref|ZP_01617374.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119449501|gb|EAW30739.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 387

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 128/351 (36%), Gaps = 30/351 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTS 158
           H   H    + +  G H       +        ++   AR L   A   +      S + 
Sbjct: 37  HQFPHEFWDKLVEFGAHGIGIPEEYGGQGGSILNQALFARELSRTAGGLSWGWGVTSFSG 96

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A  +    +    + + PKI S E             +   +  +E  GGTD+   + + 
Sbjct: 97  AKAINCCGSEPQKELFLPKIASGE-------------IKTAMSFSEPSGGTDLLGGMKTT 143

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQR 274
            +K+ DG + ++G K + +   ++D    +A+    VG     +          G+    
Sbjct: 144 AKKV-DGGWIINGEKIWSTGASVADYLFTMARSSSDVGRRSDGISIFFIPADSEGITITE 202

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              K+G R+ ++  + F + F    FLLG                 L +A   +  +   
Sbjct: 203 FP-KLGMRAISSCSIIFDDVFVSDEFLLGKEGNGWYESTKTLNNERLINAATCLGMLDGV 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A+ + + RH  G  +     ++  IADI++       L    A      ++ + E+A
Sbjct: 262 LEDAVEHMKSRHAFGKPIGQFQALQHYIADISMWQMQGELLVLHTATL----QANNIESA 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               MA +T   C +         ++ +GG GY  E  + R++R+S    I
Sbjct: 318 LESNMAKVT---CSENVGKAADLGIQILGGMGYSAETDMQRYWRDSRLLRI 365


>gi|300122626|emb|CBK23194.2| Isovaleryl-CoA dehydrogenase [Blastocystis hominis]
          Length = 438

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 126/364 (34%), Gaps = 33/364 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVAL 164
           L ++    GL        F          +        +    G   ++ S+   + + +
Sbjct: 93  LFKKMGELGLLAPTVSEEFGGGGMDATASVIIHEELSTSDPGFGLAYLAHSILFVNNLYI 152

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      + P              M       G+ +TE  GGTD+ ++ +   K  D 
Sbjct: 153 NATDEQRSRFLP-------------AMCAGDKIGGVCMTEPDGGTDVMSMRTNAVKKGDT 199

Query: 225 IYCLSGHKWFLSSPMS----DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR-LKNKI 279
                   W  +  ++    DAF++ A+ +G+     +   + +    G    + +KNK+
Sbjct: 200 YILNGRKMWITNGAINGELGDAFLVYAKTDGK-----LSMFVVEKGMRGFSLGQQIKNKL 254

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAI 336
           G RS+ T EL F +        +         M     +  +  A  SV   +  +    
Sbjct: 255 GMRSSGTAELVFEDVEVPACNRIGEEGKAALCMMRNLEMERVTLAAQSVGIAKRCIEVMN 314

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  +     ++R IA+      A  +  + +AN  D  K  +     A  +
Sbjct: 315 AYGGERVAFGQPINRFGQIQRLIAESYAGYQAGRSFLYNVANGLDLFKPGNRMDTDAVKL 374

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +C  M   V   A++ +GG GY+ E  + R +R++    I  G+  A   ++  
Sbjct: 375 ------FCGPMGKQVADNAIQVLGGYGYVGEGVVERLWRDAKLLEIGGGTNEAHQKNITK 428

Query: 457 LLEK 460
            L +
Sbjct: 429 DLAR 432


>gi|158296551|ref|XP_316942.3| AGAP008501-PA [Anopheles gambiae str. PEST]
 gi|157014764|gb|EAA12875.3| AGAP008501-PA [Anopheles gambiae str. PEST]
          Length = 415

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 115/313 (36%), Gaps = 36/313 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++   E             +    GLTE   G+D +++
Sbjct: 123 SSLCMGAIYDYGSDAQKEKYLPRLARGE-------------LIGCFGLTEPNHGSDPSSM 169

Query: 215 TSQGQKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC 271
            ++         Y LSG K W  +SP++D  I+  +  +G+V  F+V R     S  GL 
Sbjct: 170 ETRAVHDPKTKTYVLSGSKTWITNSPIADICIVWGKTEDGKVRGFIVDR---AESGEGLA 226

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             R++ K   R++AT  +                   V  M+     L++A   ++   +
Sbjct: 227 TPRIEGKFSLRASATGMILMDEVRIPEDN----LLPNVSGMRGPFGCLNNARYGIAWGAL 282

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE     A  Y   R      L    +M++ +AD+  +I+   A    +    D+   
Sbjct: 283 GAAESCLKVARGYTLDRKQFKKPLAANQLMQKKMADMLTEISLGLAACLHVGRLKDQKLH 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E       M  + K      A  +   A + +GG+G  +E  I RH     A +   G
Sbjct: 343 TPE-------MISMLKRNNAGKALDIARVARDMLGGNGIADEYHIIRHVMNLEAVNTYEG 395

Query: 446 SGNAMVLDVLNLL 458
           + +   L +   +
Sbjct: 396 THDIHALILGRAI 408


>gi|114675637|ref|XP_001170271.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 6 [Pan
           troglodytes]
          Length = 454

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 138 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 184

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 185 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 244

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 245 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 297

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 298 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 357

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 358 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 410

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 411 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 444


>gi|323525661|ref|YP_004227814.1| Acyl-CoA dehydrogenase [Burkholderia sp. CCGE1001]
 gi|323382663|gb|ADX54754.1| Acyl-CoA dehydrogenase [Burkholderia sp. CCGE1001]
          Length = 614

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 84/498 (16%), Positives = 172/498 (34%), Gaps = 72/498 (14%)

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           V   P   + L      GL  +  D     +      +      ++ A          ++
Sbjct: 71  VHIIPEVKSALDAFCEAGLMAAGQDHELGGMQLPIVVEKAGFAWFMAANAATAGYPFLTI 130

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +A+++    TP   + +               P  +      + L+E + G+ ++ I +
Sbjct: 131 GNANLLLAHGTPAQIEAFV-------------RPELEGRFFGTMCLSEPQAGSSLSDIAT 177

Query: 217 QGQKIS----DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----------RVGCFL 257
           + +          Y L G+K ++S    +       ++LA++ G           +  F+
Sbjct: 178 RAEYECESPFGAQYRLRGNKMWISGGEHELSENIVHLVLAKIPGPDGKLMPGVNGISLFI 237

Query: 258 VPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEF-----------SNTFGFLLGD 301
           VP+ L +G       N +    L +K+G+R      L F               G+L+G+
Sbjct: 238 VPKYLVNGAGACGEHNDVVLAGLNHKMGHRGTTNCLLNFGEGTKYRPAGAEGAIGYLVGE 297

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------GG-------I 348
                  +  M     +   + + +        A+ YAR R         G         
Sbjct: 298 PGQGLACMFHMMNEARIGVGLGAATLGYTGYLHALDYARNRPQGRTAGPGGKNPASPQVK 357

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKM 407
           L++   ++R +         A AL+   A   DE ++ R +      ++ PI K W  + 
Sbjct: 358 LVEHADIRRMLLAQKSYAEGALALNLYCAKLCDEERAGRDDAVLLLDLLTPIAKSWPSQW 417

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465
                + A++  GG GY  E ++ + YR++  N I  G+     LD+L   ++ K     
Sbjct: 418 CLEGNSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTYGIQALDLLGRKVVMKNGAAL 477

Query: 466 EQLFSTL------EQDLGSS--GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517
               + +        D G          + R ++ L    + L      ++ LA+++  L
Sbjct: 478 SAFLAAMRTTMRRAHDHGDRQMADYARALDRAAVRLADVTRELWSVADPRLTLANASLYL 537

Query: 518 YRAGMNDIADVFLENRFL 535
              G   ++ ++LE    
Sbjct: 538 EAFGHIVMSWIWLEQALA 555


>gi|188575652|ref|YP_001912581.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520104|gb|ACD58049.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 391

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 126/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L      GL  +    R     +   ++ +    L         
Sbjct: 43  GDAFDAGRFPREWIPDL---AELGLLGASLPVRDGGAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P++ +               V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQCWLPEMATG-------------RVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKMWITNGSIAGLAIIWAHTDD-----GVRGFLVETDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
                + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALTYAGERILFGRPLAATQSAQIKLADMARGISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  +  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDIARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|21242224|ref|NP_641806.1| glutaryl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107646|gb|AAM36342.1| glutaryl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 391

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 125/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   +      GL  +    R     +   ++ +    L         
Sbjct: 43  GDAFDAGRFPREW---IPELAELGLLGASLPVRDGGAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  +G        W  +  ++   I+ AQ +       V   L      G
Sbjct: 147 DPAAMTTRAVREGEGWRLNGAKMWITNGSIAGLAIIWAQTDD-----GVRGFLVQTDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
                + +K+  R++ T  L   N F      L  + G    +  L       A  ++  
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPQAAGLKAPLSCLNQARYGIAWGAIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    + 
Sbjct: 262 AVACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKEAGTLQP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+ + A+          C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQVSLAKW-------NNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|315047290|ref|XP_003173020.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
 gi|311343406|gb|EFR02609.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893]
          Length = 424

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 23/292 (7%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-W 233
           +  S E        + +  +    GLTE   G+D  ++ +  +      G Y LSG K W
Sbjct: 139 EFGSEELKQRLLPQLAEGKLLGCFGLTEPNHGSDPGSMETVARPHPTKTGYYSLSGTKTW 198

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFS 292
             +SP+SDAF++ A+++G++  F++ R   D  P G L    +KNK   R++ T  ++  
Sbjct: 199 ITNSPISDAFLVWAKLDGKIRGFVIER---DQCPEGTLKTPAIKNKTALRASITGMIQMD 255

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
           N            TG V        L+SA + ++      +   ++ A  YA  R    G
Sbjct: 256 NCPVPEANMFPEVTGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKG 312

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++A   DE K+  E       M  + K   C 
Sbjct: 313 NPLAKYQLVQKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCD 365

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A      E  GG+   +E  I RH           G  +   L +   +
Sbjct: 366 RALAGSRTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLILGRAI 417


>gi|315426793|dbj|BAJ48416.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
 gi|315426806|dbj|BAJ48428.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
          Length = 389

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 121/355 (34%), Gaps = 34/355 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ---AHKIRAARLYLMAQLEAGHLM 152
           +  F   +   +      G         +  +       +  I               LM
Sbjct: 34  ERRFPEEYWKAV---AEQGFLGICIGEQYGGLGLGLQAVSEAIIGVAAAGGGLPAGDLLM 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +V +   +  +    V + + P++   E             +    G TE   G +  
Sbjct: 91  RTNVFAGMTIERLGREEVRQQYLPRLVRGE-------------LICSFGHTEPNAGVNTF 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN 268
            I +   +  DG        W   + ++D  + +A+       R     +   L D    
Sbjct: 138 DIQTSAVREGDGYRLNGQKIWITLAHLADIIVTVARTTPKEKARKKSEGLTLFLVDAKQP 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+   ++   +  R   +  + F + +     +LG+++     +  +     + +A +S+
Sbjct: 198 GVKTSKIPG-MALRPLTSNVVYFEDAWVPATHVLGEVDKGWEALTPLLNAERVCTASISI 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                 L  ++ YA  R V G  +     ++  +A++  ++  A  ++ + A  FD  K 
Sbjct: 257 GVAEYLLNRSVDYASNRRVFGRPIGSNQAIQFPLAEVKAELEVARLMTQKAAWLFDNGKE 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            + EA  A   A        ++A      A++  GG+G+ E+  I R +R++   
Sbjct: 317 CAFEANVAAFTAA-------RVAFKAADRAVQTFGGNGFAEDNDIERFFRDARLF 364


>gi|294948870|ref|XP_002785936.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239900044|gb|EER17732.1| Medium-chain specific acyl-CoA dehydrogenase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 427

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 117/315 (37%), Gaps = 22/315 (6%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+         V    T  + K  AP     E                 L +TE   G
Sbjct: 118 WGLIEGLQIGLPPVLNFATDALKKRVAPACLRGEKKK-------------CLCITEPYAG 164

Query: 209 TDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+A I +  +  +DG  Y +SG K ++++ +   +  +A   G VG   +  LL +   
Sbjct: 165 SDVANIRTTAKLSADGKHYIVSGEKKWITNGIFADYFSVAVRTGGVGMKGISMLLIERDM 224

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+   R++ + G   + T  +EF++       L+G  N     +              +
Sbjct: 225 PGVKTTRMECQ-GVWPSGTTFVEFNDVKVPVENLIGRENEGFRVIMYNFNHERWGFVAQA 283

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               RV   E+  YA++R   G  L++ PV++  +A++A  I         + +  +   
Sbjct: 284 ARLSRVLYEESFKYAQKRRTFGKTLMEHPVIRWKLAEMARQIEGVQYWLESVTHQMNVMP 343

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANS 441
                 A    +A + K    K+      EA +  GG+ Y        + R YR+  A +
Sbjct: 344 WGESMTALGGTLALM-KAHSTKVFEYCAREAAQVFGGNAYTRSGLGEKVERLYRDVRAYA 402

Query: 442 ILLGSGNAMVLDVLN 456
           I  GS   ++   + 
Sbjct: 403 IPGGSEEILLDLGIR 417


>gi|118468197|ref|YP_888446.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169484|gb|ABK70380.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 384

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 123/376 (32%), Gaps = 25/376 (6%)

Query: 88  GPGGERWDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           GP  +  D   EF P    LL  +   GL   I+           A       L      
Sbjct: 27  GPRAQDIDLTGEFFP---DLLADAAAIGLQGLIFTDDGAIDATMFALAHETTELIASYSG 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +S +     ++A      +   W P +                S+     L+E  
Sbjct: 84  AVALGISVARLHGYLLAAYAPSDIRDRWLPGLIDG-------------SIRGSFALSEPH 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            GTDI A  +   +  DG   ++G K +++ SP +   I+LA++            +   
Sbjct: 131 SGTDIRAGRTVAVEHGDGTVSITGEKAWITQSPAAHFCIVLAKLGSTDRDAPTAAFVVPL 190

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMS 324
             +G+   + +   G R      + F N        L       + +   L  LD+    
Sbjct: 191 DTDGVTVGKDEPMSGFRGMPMANVHFDNCRIPSSWRLQTDGFRGMMEGLNLARLDAGCYG 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V  MR +L EA  Y R R   G  L D  +++  +  +  D  AA  L        +   
Sbjct: 251 VGFMRAALREATAYVRDRQAFGKTLADLQIVQEKLGRLHADYLAARGL------LREGVA 304

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           S +        +    K +    A     EA++ +GG G      + R  R++    I+ 
Sbjct: 305 SYAGGGGGDPHLISAAKMFATDAAMRNTVEAVQLLGGYGVHLHYPVQRLMRDAKITQIID 364

Query: 445 GSGNAMVLDVLNLLEK 460
           G+     L +     +
Sbjct: 365 GTSEIHALMLGRAAVR 380


>gi|163737634|ref|ZP_02145051.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
 gi|161389160|gb|EDQ13512.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
          Length = 386

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 126/399 (31%), Gaps = 30/399 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGER----WDKVEFHPAWHALLRRSIHDGLHCSIW 120
           +   T        + +           E      D  +   A   L+      G      
Sbjct: 1   MADKTFLSWPFFEDRHRALAADLDRWAEDALAHIDHSDTDAACRGLVSALGAAGWTQHSG 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
               E +  +    IR           A    +        ++L  T     +W P   S
Sbjct: 61  AMVGEVLDVRTLCLIR--ETLARHDGLADFAFAMQGLGTGAISLFGTEAQQAEWLPLTRS 118

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
                                LTE + G+D+A  T    +  +         W  +  ++
Sbjct: 119 G-------------KAISAFALTEPQSGSDVANSTMTAMRDGEHYVLNGEKTWISNGGIA 165

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D + + A+     G   +   +      G         +     AT  L FS+       
Sbjct: 166 DIYTLFARSGEGPGAKGLSAFVVPAGLPGFEVVERLETLAPHPLAT--LRFSDCRIPRSA 223

Query: 301 DLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L     G    M +L       A  ++   R +L EA+     RHV G  L D  +++ 
Sbjct: 224 LLGAPGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTSRHVQGARLADLQMVQG 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+ALD+ A+  L +R A + D        AA     A + K +    A  +I +A++
Sbjct: 284 HIADMALDVDASALLVYRAAWAKDSG------AARITREAAMAKLFSTDQAQKIIDKAVQ 337

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             GG G  + + +   YR+  A  I  G+ +   + +  
Sbjct: 338 LHGGDGVRQGQKVEELYRDIRALRIYEGASDVQRVVIAR 376


>gi|71000641|ref|XP_755002.1| glutaryl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66852639|gb|EAL92964.1| glutaryl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
          Length = 430

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 83  RKILEEMGELGLLGASIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIY 142

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              T      + P++              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 143 EFGTQEQKDRFLPQL-------------AKGKLAGCFGLTEPNHGSDPGSMETTAREHPT 189

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG   W  +SP++D  ++ A+    G++  F+V R      P G L    +KN
Sbjct: 190 KKGYYLLSGAKTWITNSPIADIMLVWAKLQTTGKIKGFIVER---SQCPPGTLQTPPIKN 246

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           K   R++ T  ++  +                          L  A  ++  +   +  A
Sbjct: 247 KTALRASITGMIQMDDCPVPAENMFPDVEGLKGPFTCLNSARLGIAFGAMGALEDCIDRA 306

Query: 336 IHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
             YA  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E      
Sbjct: 307 RTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDAGKSTPE------ 360

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A A      E  GG+   +E  I RH           G  +   L +
Sbjct: 361 -MISMVKRQNCDRALANARLLQEIFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHALIL 419

Query: 455 LNLL 458
              +
Sbjct: 420 GRAI 423


>gi|183222678|ref|YP_001840674.1| putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912710|ref|YP_001964265.1| carnitine metabolism acyl-CoA dehydrogenase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167777386|gb|ABZ95687.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167781100|gb|ABZ99398.1| Putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 391

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 107/306 (34%), Gaps = 18/306 (5%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKA-PMQKTSVAIGLGLTEK--RGGTDIAAIT 215
           A  +     P         + + E        P+ K  +  G  +TE     G+D  ++ 
Sbjct: 87  APYIFNCDAPDEGNMHLLSLAATEKQKELILHPLIKGELRTGFAMTEPSPGAGSDPTSLQ 146

Query: 216 SQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           +  +K  D  + L+G KW+ +    +   I++A+V G          L      G    R
Sbjct: 147 TNAEKQGD-KFILNGRKWYCTGANGAKYLIVMAKVNG--SFRKTTMFLVPTDAKGYTMVR 203

Query: 275 LKNKIGNRS-NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +G+       EL F N       +LG +       ++      L   +      R 
Sbjct: 204 EIELMGSHGPGGHCELNFENVEVPEDMVLGRVGEGFRLSQERLGPARLTHCMRWTGMARR 263

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L+ A  YA+ R V    + D   ++   A+ A +I  A  L+ + A      K   +E 
Sbjct: 264 ALSIARSYAKEREVFNARIADHQGIQWMFAERATEIEMAFLLTLKAAWLLKTGKDARQET 323

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+     +           I  A++  GG GY  +  +   YR++ A  I  G     
Sbjct: 324 SMAKWKVSESLCNT-------IDMAIQICGGKGYSRDLPLELFYRDARAARIADGPSEVH 376

Query: 451 VLDVLN 456
            + +  
Sbjct: 377 KMVIGR 382


>gi|116694859|ref|YP_729070.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529358|emb|CAJ95705.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 388

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 115/363 (31%), Gaps = 28/363 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
                 L   S   GL                   +       + +    + + P   + 
Sbjct: 45  PEEHARLDAMSRELGLWGLDAPTEMGGADLPTVAMVGV--NEELGKTITPYELPPDSPNL 102

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            M+ L  +    + +              AP  +      + ++E   G D A +T++ +
Sbjct: 103 RMLMLSASEAQRERYL-------------APYARGETVSAIAISEPGAGGDPAMMTTRAE 149

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
           +  +         W   +  +D  I++A  +   G    +   + +    G   +R    
Sbjct: 150 RDGEHWVLNGRKIWISRAARADWTIVMAVTDKAKGARGGISAFIVERGTPGFRVERRIPM 209

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG    +T E+   +       LLG       P++       +  A   +   + +L   
Sbjct: 210 IG--GASTYEVVLEDCRIPASQLLGTEGQGFAPMQARLSTRRVQMAAWCIGRAQRALDMI 267

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  L  +  ++  +AD A  I A   +++  A+  D           AR 
Sbjct: 268 CEYAPQRQTFGAPLAQRQAIQWWVADAATRIHACRLMTYEAASRIDAGDE-------ART 320

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K +  +MA  VI  AM+  G  G  +E  + +   E+    I  G        + 
Sbjct: 321 QVSMIKVFATEMAWDVIDHAMQTFGAMGMTKELPLQQMANETRLMRIYEGPSEVHRWVIA 380

Query: 456 NLL 458
             L
Sbjct: 381 RDL 383


>gi|309789981|ref|ZP_07684557.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
 gi|308228001|gb|EFO81653.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
          Length = 544

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 128/403 (31%), Gaps = 50/403 (12%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L  L EY       E  R        L A         K  + P            GLH 
Sbjct: 13  LATLREYAAKQLTDEFLRD-------LDARDEFPVEVLKELYDPN---------KIGLHL 56

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                 +  +        R +       L     +  +      + +  T      W  +
Sbjct: 57  LFIPEEYGGLGGGAYDIYRVSEQMARIDLGIATGVLATFLGTDPITVGGTEEQKAHWMGR 116

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHK 232
           I                 + +  G TE + G+D+  +T++ + + D     G       +
Sbjct: 117 I-------------ADEGMLVAYGATEPQAGSDLGTLTTKAEPVLDDGKVVGYKISGRKQ 163

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +  ++  + +LA   G    F+V     D    G    + ++K G R++ T  L   
Sbjct: 164 WISNGGVAVIYTILANTPGGPSWFVV-----DRDTPGFVKGKHEDKHGIRASNTAALFLD 218

Query: 293 NTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
           + +      + G         + +     L  A   + G   +L  AI Y++ R   GG+
Sbjct: 219 DVYVDADRLVGGVEGQGLAQAQAVFGYTRLMVAAFGLGGGWAALERAIRYSQTRIQGGGL 278

Query: 349 LIDQPV-MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           L  +     R +   A+ + AA A     A   D  +         +    I KY   + 
Sbjct: 279 LSTKQAYTHRLLVPNAIRLEAARAYIEWTAARIDAGEPD------LQTEGAIAKYMATEG 332

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 +A++ +GG GY +E  + +  R+     I  G+   +
Sbjct: 333 GNKAAEDAIQALGGYGYTKEYMVEKIKRDVRITCIYEGTSEIL 375


>gi|317147952|ref|XP_001822404.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 437

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 89/455 (19%), Positives = 156/455 (34%), Gaps = 48/455 (10%)

Query: 29  PLFIGMNAYSSDS--LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           P     N Y +D    L A + N+   V   +           AQE         P    
Sbjct: 18  PQLDIKNPYYTDLHHNLRAYVRNY---VESSIAPY--------AQEWEAAGQVPEPVRRR 66

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +   G        HP     +  +    L  +I    ++         I A  L     +
Sbjct: 67  HCELGFGI----IHPL--TTIEDAAGLFLPNNIPREKWDTWC----SLIVADELIRTGYV 116

Query: 147 EA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                L   +      +A   T    + W PK+              K  +   LG+TE 
Sbjct: 117 GVIWGLGGGNNIGCPPIARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEP 163

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A I++  ++  D        KW +++ +   +   A   G  G   +  L+   
Sbjct: 164 DAGSDVANISTTARREGDVYVVNGAKKW-ITNGIWADYCTAAVRTGGPGKGGISLLVIPL 222

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G+  +R+ N  G  ++ +  +E  +       L+G+ N     +        L  A 
Sbjct: 223 AAPGVTRRRMYNS-GVHASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLAC 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+   RV   +A HYA +R   G  LI +  ++  I    L I  A A   +L N  + 
Sbjct: 282 ASLRLARVCAEDAFHYATQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIEL 341

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPA 439
            K R  +      M  + K    +     + EA + +GG+GY    +   I +  R++  
Sbjct: 342 TKDRPTDDVRIGGMTALLKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARV 401

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
           + +  GS   M   +   L++ T         LE+
Sbjct: 402 HVVGGGSEEIM---MGLALQEETKALRTRRKALEK 433


>gi|108799943|ref|YP_640140.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869053|ref|YP_939005.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770362|gb|ABG09084.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695142|gb|ABL92215.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 412

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 114/316 (36%), Gaps = 34/316 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + + E                   +TE   G+D    + S  
Sbjct: 117 PTIMGRGTLAQQERWLPGLVTYE-------------KVGAWAITEPDSGSDAFGGMKSYV 163

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC----FLVPRLLEDGSPNGLCYQ 273
            +  D  Y L+G K F+++   +D  ++ A+++   G       V   + D    G    
Sbjct: 164 VRDGDD-YILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTFVLDRGMEGFVQS 222

Query: 274 RLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +   K+G  S+ T EL F+N               +                +  A M++
Sbjct: 223 KPFRKMGIHSSRTGELFFNNVRLGRDRLLGETEDNEAGDGRESARSSFSAERIGVAAMAL 282

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             +   L  ++ YA+ R + G  +    +++  +A + +       + FR+  +      
Sbjct: 283 GVIEECLKLSVDYAKSRTLWGKEIGQFQLIQLKLASMEVARMNVRNMLFRVIEASQTGTP 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            S         A   K++C + A  V  EA++  GG+GY+ E  + +  R++ +  I  G
Sbjct: 343 ISLA------EASAIKWYCSQAATDVAMEAVQLFGGNGYMTEYRVEQLARDAKSLMIYAG 396

Query: 446 SGNAMVLDVLNLLEKG 461
           S    +  V   L  G
Sbjct: 397 SNEVQITHVAKGLLSG 412


>gi|196234604|ref|ZP_03133424.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
 gi|196221350|gb|EDY15900.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
          Length = 588

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 131/403 (32%), Gaps = 28/403 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG-HLMSPSVTSASMVA 163
            ++      G+        F      Q    R               + +        + 
Sbjct: 86  EVIEGLARHGVLGMTAPAEFGGRGFSQMAYGRILEEIGSRCASTSVFVNAHHSIGIRALL 145

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L  T      W P + S +                   LTE   G+D A + ++ +  +D
Sbjct: 146 LFGTEEQKHRWLPPLVSGKQ-------------LAAFALTEPEAGSDAANVQTRAEPSAD 192

Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLC-YQRLKNKI 279
           G  Y L+G K ++++  ++    ++A+          V   L      G    +    K+
Sbjct: 193 GTHYVLNGEKRYITNAAIAQVLTVMARTPIPGGNETAVTAFLVTPDMPGFALIEPRMEKL 252

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS---AIMSVSGMRVSLAEAI 336
           G R  AT  L F N        L      ++    ++          S    +  L  A 
Sbjct: 253 GIRGTATGRLAFRNMRVPRENILGPLGKGLKVALSVLDFGRTTFGACSTGAAKTCLRLAT 312

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           H+A RR   G  L    +++  IA +A +  A  A++   A+  D             + 
Sbjct: 313 HHANRRRQFGRTLGAFELVRGKIARMAANAYAMEAMTTVTASLIDRGLED------YMLE 366

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K +  +    ++ +  +  GGS Y  +  + R  R++  N I  G+   +   +  
Sbjct: 367 TAMLKVFTTEALWQIVNDTFQIYGGSAYFTDLPLERMLRDARINQIGEGANEVLTSFIAL 426

Query: 457 LLEKGTNL-FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498
           +  +G  + F++++  L    G   K     +  + +     +
Sbjct: 427 VGMRGPGMQFKEIWDALHHPAGHLRKAWNAGMERAGAALHAPE 469


>gi|58581140|ref|YP_200156.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623065|ref|YP_450437.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58425734|gb|AAW74771.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367005|dbj|BAE68163.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 391

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 125/371 (33%), Gaps = 31/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L      GL  +    R     +   ++ +    L         
Sbjct: 43  GDAFDAGRFPREWIPDL---AELGLLGASLPVRDGGAGLGAVSYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P++ +               V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQCWLPEMATG-------------RVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKMWITNGSIAGLAIIWAHTDD-----GVRGFLVETDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSG 327
                + +K+  R++ T  L   N F      L  + G    +  L       A   +  
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAGLKAPLSCLNQARYGIAWGVIGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    +    R 
Sbjct: 262 AVACLREALTYAGERILFGRPLAATQSAQIKLADMARGISTAQLLALQLGRLKEAGTLRP 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E+         + K+  C+MA  V  E  + +G +G   E    RH     +     G+ 
Sbjct: 322 EQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYEGTE 374

Query: 448 NAMVLDVLNLL 458
               L V   L
Sbjct: 375 TVHQLVVGRAL 385


>gi|308176777|ref|YP_003916183.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307744240|emb|CBT75212.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 384

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 139/402 (34%), Gaps = 45/402 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E A+      PQ   +             P  + ++++    GL            
Sbjct: 15  DMVREFAQEV--VAPQSAQHDAD-------HTFP--YDIVKQMGQMGLFGLPISEEHGGS 63

Query: 128 VRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                H   A   L  + Q  A  L +     A  +         + W P + + E    
Sbjct: 64  GGDYFHLALALEELGKVDQSVAITLEAGVSLGAMPIYRFGNEAQKQKWLPALATGE---- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                       G GLTE   G+D +A  ++  K+ DG + + G K F+++  +D    +
Sbjct: 120 ---------RLAGFGLTEPGAGSDASAALTKA-KLEDGHWVIDGAKEFITNSGTDITSHV 169

Query: 247 AQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
                   +   G   +  ++      G   ++  NK+G  ++ T  L F+         
Sbjct: 170 TATAVTGVDEATGKKEISAIIVPTGTEGFTAEKAYNKVGWHASDTHPLSFNGARVPEENL 229

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMK 356
           L            L  LD   ++++ +     +  + E++ YA+ R   G  +     + 
Sbjct: 230 LGERGRGYAYF--LEILDEGRIAIAALATGAAQGCVDESVKYAKTRTSFGKTIGQYQSIS 287

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA +     AA    +  A      K    EAA+A+++A        + A     EA 
Sbjct: 288 FMIARMQSRAHAARLAYYAAAAKMLAGKDFKIEAAHAKLIA-------SEAAMDNAREAT 340

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG G++ E  +ARHYR+S    I  G+     + +   L
Sbjct: 341 QIFGGYGFMNETLVARHYRDSKILEIGEGTTQVQQMLIARGL 382


>gi|114675631|ref|XP_001170290.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 7 [Pan
           troglodytes]
 gi|114675633|ref|XP_001170313.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 8 [Pan
           troglodytes]
 gi|114675635|ref|XP_512417.2| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 10 [Pan
           troglodytes]
 gi|332853284|ref|XP_001170352.2| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 9 [Pan
           troglodytes]
          Length = 438

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 395 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 428


>gi|311743430|ref|ZP_07717236.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312560|gb|EFQ82471.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 462

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 86/447 (19%), Positives = 162/447 (36%), Gaps = 63/447 (14%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER-WDK 96
            SD  +   +      +  EL    + + S              P         +   D 
Sbjct: 50  ESDLAVRDAVR---DWIDTELRPHLDRLESGDL----------PPYDLVRKLFADFGIDT 96

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-------QAHKIRAARLYLMAQLEAG 149
           V    A  AL      D       D + +             A  + A  +  +A +  G
Sbjct: 97  V----ASEALAAMLAADRRRQQPSDGTADEPAPPSPAGDLDGAASMAAVLVSELAGVSLG 152

Query: 150 HLMSPSVT---SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            + S +V+    A  +A   T    + W P++ + E+                  +TE  
Sbjct: 153 SVASVTVSLGLGAGTIASKGTLEQKERWLPRLVTAEH-------------IAAWAITEPE 199

Query: 207 GGTDI-AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL----VPR 260
            G+D    +T+  ++  D  Y L+GHK F+++   +D  ++ A+++   G  +    V  
Sbjct: 200 SGSDAFGGMTTTVRRDGDD-YLLTGHKTFITNGPYADVIVVYAKLDEGDGTPVRDRPVLT 258

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED------ 311
            + D   +GL       K+G  S+ T EL F         LLG    + G  +       
Sbjct: 259 FVLDRGMDGLVQGAPFKKMGMMSSPTGELFFDRVRLTPDRLLGGEKPTGGSDDGRESARQ 318

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
             ++  +  A++S+  ++     +I YAR+R + G  + D  +++  +A +      A  
Sbjct: 319 NFVMERVGCAVLSLGIIQECHRLSIDYARQRELWGRPIGDLQLIQLKLAKM----EVARL 374

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
               +  S  E        + A   A   K +  ++A  V  +A++  GG+GY+ E  + 
Sbjct: 375 NVQNMVFSALEHLRSGRMPSLAE--ASAVKLYSTEVATDVAMDAVQLFGGNGYMAEYRVE 432

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           +  R++ +  I  GS    V  V   L
Sbjct: 433 QLARDAKSLMIYAGSNEVQVTHVAKGL 459


>gi|85860829|ref|YP_463031.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
 gi|85723920|gb|ABC78863.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB]
          Length = 414

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 125/388 (32%), Gaps = 46/388 (11%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+    P    L++ S   G+       S +             R               
Sbjct: 48  DRRHVFPM--DLIKTSWEMGIMNISIPESIKGYHVDVVSAALIIRELAYGDSGIATSAMC 105

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  ++A   T    + +               P   + +     LTE   G+D  ++
Sbjct: 106 NDLANVVIAQHGTDEQKEAFL-------------RPFVDSPLLSAFCLTEPGAGSDNLSM 152

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--------------------EGRV 253
           TS   K  DG Y L+G K F+++   +  F +  +V                    +   
Sbjct: 153 TSFISKRDDGKYVLNGSKCFITNASYASQFTVFCKVGKPSSQLMACVVVPVPPFVLDKAS 212

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310
               + R +E  S   +   + ++K+G R + T  + F +     G ++GD  +    + 
Sbjct: 213 PVDGI-REIELASGGKITVGKPEDKLGQRLSNTASVTFEDVLIEPGQIIGDRRLGFKYII 271

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D+        A + V   + +    + Y + R   G  L D PV +  +  +   +  + 
Sbjct: 272 DVLDFARPMIAAIGVGVAKKAFDLTLSYTKERKQFGQRLCDIPVAREMLVQMWKKVELSE 331

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
               + A          E A    + + + K    + A     E +   GG G+  E  I
Sbjct: 332 LALLKSAIKI------QENATDKGMYSSLAKNEAAEAALFCANEGLHLHGGYGFTNEYEI 385

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  R+     I  G+     + +   L
Sbjct: 386 SKLVRDVHIIDIYEGTREVQNMIIGREL 413


>gi|85094673|ref|XP_959935.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28921392|gb|EAA30699.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 436

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 114/290 (39%), Gaps = 27/290 (9%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLSSP 238
           E        M K  +    GLTE   G+D  ++ +  +     +G+Y LSG K W  +SP
Sbjct: 154 EQKERFLPGMAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKEGVYLLSGSKTWITNSP 213

Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           ++D  ++ A++   G++  FLV R      P G L   ++KNK G R++ T  ++  N  
Sbjct: 214 IADVLVVWAKLQETGKIRGFLVER---SACPPGTLETPQIKNKTGLRASITGMIQLDNCP 270

Query: 296 GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-GGI 348
                        +E +K     L+SA   ++      +   LA A  YA  R    G  
Sbjct: 271 VPKENM----FPEIEGLKGPFTCLNSARFGIAFGMMGALEDCLARARTYALERKQFKGNP 326

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +A+ A D+A  T  + ++    DE K+  E       M  + K   C   
Sbjct: 327 LAKYQLVQKKLAEAATDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRT 379

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                   E  GG+   +E  I R            G  +   L +   +
Sbjct: 380 LYHARTLQEIFGGNAVSDEYHIGRVVANLYVTQTYEGQSDIHSLILGRAI 429


>gi|197106709|ref|YP_002132086.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480129|gb|ACG79657.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 388

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 76/422 (18%), Positives = 128/422 (30%), Gaps = 52/422 (12%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
            +L  L+A F   V  EL  L        A  +AR A      L                
Sbjct: 10  RMLKDLVARF---VRDELTPL-------EAGVMAREAEGKGAYLAP-------------- 45

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
                L   S   GL                           + +    + + P   +  
Sbjct: 46  EEHARLDEVSRRLGLWGLDAPEDVGGSDLP--MVAMVGVEEELGRTVTPYTLPPDSPNLR 103

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+      R    +              AP         +G++E   G+D AA+T++  +
Sbjct: 104 MLMATVDERQRAAYL-------------APYVAGKTVSAIGISEPGAGSDPAAMTTRAVR 150

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
             D         W   +  +D  I++A  +   G    V   L D    G    R    +
Sbjct: 151 DGDDWVIDGRKIWISRADHADFTILMAVTDKEKGARGGVSAFLVDKGTPGFNVLRRIPML 210

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G     T E+           LLG       P++       +  A  SV   + +L   +
Sbjct: 211 G--GQYTYEIALEGCRVEGWKLLGQEGAGFAPMQTRLGTRRIQMAAWSVGMAQRALDMVV 268

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA +R   G  L ++  ++  +A+ A  I AA  +++  A   D+ +    E       
Sbjct: 269 DYAPQRKTFGVPLSERQAIQWWVAEAATKIHAARLMTYDCAWKLDQGRDVRSE------- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K++  +MA   +  AM+  G  G  +E  +     +     I  G        V  
Sbjct: 322 ISMIKWYATEMAYETVDRAMQAFGAMGMTKELPLQLMQAKLRTMRIYDGPTEVHKWVVAR 381

Query: 457 LL 458
            L
Sbjct: 382 NL 383


>gi|149923307|ref|ZP_01911716.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149815847|gb|EDM75368.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 641

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 80/551 (14%), Positives = 164/551 (29%), Gaps = 58/551 (10%)

Query: 10  LAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69
              + +    D     +        N  + D      +A         + ++GE+V    
Sbjct: 6   EENDDLRWYFDHGIDWDPVVRATEWNFKAEDCP--ESVAEAVETYRDFMTMIGEFVAEDI 63

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A     +   ++  +      G+R            +  R     LH     R F  +  
Sbjct: 64  APHWEELDTQHSELVDGEIVFGQR---------MQTIFDRIQELDLHWMTLPREFGGMQS 114

Query: 130 KQAHKIRAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  +A L       +   H    ++  A ++  +       D +    +       
Sbjct: 115 PLLLYFLSAELMARGDQSVMTHHGFHGAMAMAMLIFSIREGSTTFDPSKGQITATRFQEF 174

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
              +        + +TE   G+D+A + + G++  DG + ++G K F++S  +    ++A
Sbjct: 175 IEEIGTGEAWGAMDITEPDAGSDMARLRTVGEQDEDGNWFVTGQKIFITSGHAKYHFVIA 234

Query: 248 QV-------EGRVGCFLVPRLLE-------DGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +        +   G   +   L        +G        R + K+G+ + AT  + F  
Sbjct: 235 RTEKPGDPDDPMAGLGGLSFFLVQTYEDTDEGRERFATIDRAEEKMGHHAAATCAISFDR 294

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
           T   LLG        +  +     +     S+     +  +A  YA  R   G  +    
Sbjct: 295 TPAHLLGKRGEGFKYMLTLMNGARVGVGFESIGLCEAAYNKAKAYAAERPSMGKTIDRHE 354

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------------------ 395
           ++   + ++  DI    AL  + A    E  +   E A   +                  
Sbjct: 355 MIADMLDEMRTDIQGLRALCVQAAWH--EEIATKLEIARDHMPELSPVPLDELDGEIRRH 412

Query: 396 ------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                   P+ KY   + A       ++  GG+GYI+E    +  R++    I  G+   
Sbjct: 413 KAAARRATPLLKYLSSEKAVEHARRCIQIHGGNGYIKEYGAEKLLRDAMVLPIYEGTSQI 472

Query: 450 MVLDVLNLLEKG-TNLFEQLFSTLEQD----LGSSGKKVITILRDSISLCKEDKGLARFL 504
             L  +     G     +     + Q     L S       + +  +      + L R  
Sbjct: 473 QSLMAMKDTLGGVMKNPQAFVREMAQARWRSLSSRDPLERRVAKLQLLQADTVQYLIRRT 532

Query: 505 TEKIALASSAA 515
                 +    
Sbjct: 533 ASDKVRSLQGK 543


>gi|89068383|ref|ZP_01155786.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89046037|gb|EAR52096.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 384

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 122/372 (32%), Gaps = 29/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLE 147
             G   D  +   A  AL+      GL     + +  P  R     +  AR  L      
Sbjct: 27  AAGLAVDHADTDAACRALVTTLGAAGLL----EHTAAPDGRLDVRTLCLAREILARHDGL 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        + L  T      W P+              +         LTE   
Sbjct: 83  ADFAFAMQGLGTGALTLFGTDAQKARWLPE-------------TRAGRAIAAFALTEPAS 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T   +   DG        W  +  ++D + + A+     G   +   +     
Sbjct: 130 GSDVANSTMTARADGDGYVLDGEKTWISNGGIADVYTVFARTGEGPGARGLSAFVVAAGT 189

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL        I         L F         L+G           +  +     A  +
Sbjct: 190 PGLEIAERLETIAPH--PLARLRFDGCRMPADALVGAPGAGFKVAMAVLDVFRSTVAAAA 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L E++     RHV G  L D  +++  +AD+ALDI AA  L +R A + D   
Sbjct: 248 LGFARRALDESLARVSTRHVQGAPLADLQLVQGHLADMALDIDAAALLVYRAAWAKDSGA 307

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            R          A + K +  + A  VI +A++  GG G      + R YRE  A  I  
Sbjct: 308 PR------VTREAAMAKLFATEQAQRVIDQAVQLHGGDGVRAGGIVERLYREIRALRIYE 361

Query: 445 GSGNAMVLDVLN 456
           G+ +   + +  
Sbjct: 362 GASDVQKVIIAR 373


>gi|257387180|ref|YP_003176953.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257169487|gb|ACV47246.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 408

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 119/367 (32%), Gaps = 51/367 (13%)

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
           P V  +++ +    L                     +    +    + W P +       
Sbjct: 67  PGVSPRSYGLLMQELEAGDSGVRSMASVQGALVMYPIHEFGSEAQRERWLPDL------- 119

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                          GLTE   G+D A++ +      DG        W  ++P++D  ++
Sbjct: 120 ------AAGDAVGCFGLTEPEHGSDPASMETTAVPDGDGYRLSGTKTWITNAPIADVAVI 173

Query: 246 LAQVEGRV--GCFLVPRLLEDGSPNGLC------------------YQRLKNKIGNRSNA 285
             +++         V  +L D    G+                      +  K+  R+++
Sbjct: 174 WCKIDDGDAETDDPVRGVLVDLDSEGVSEEQGETEPRQTDRSGGVETSEIDGKLSMRASS 233

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYA 339
           T E+   + +       +     VE MK  L  L  A   ++   V  A      A  YA
Sbjct: 234 TGEIHLRDAWVP----EDALLPGVEGMKGPLSCLTEARYGIAWGAVGAARDCFEAAREYA 289

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   GG +    + +  +A++A  I  A  L+ RLA        R ++ + A+     
Sbjct: 290 TDREQFGGPIARFQLQQEKLAEMATRITTAQLLADRLATLKARGDLRPQQVSMAKR---- 345

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 +MA  V   A E +GG+G   +    RH           G+ +   L +L    
Sbjct: 346 ---NNVRMAREVAQTAREMLGGNGITTDYPPMRHAANMETVYTYEGTHDIHTL-ILGADL 401

Query: 460 KGTNLFE 466
            G + FE
Sbjct: 402 TGIDAFE 408


>gi|121610784|ref|YP_998591.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555424|gb|ABM59573.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 388

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 115/363 (31%), Gaps = 28/363 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
                 L   S   GL         +         +       + +    + + P   + 
Sbjct: 45  PEEQERLDALSRELGLWGLDAPAEMDGHDLPVVAMVGV--NEELGKTITPYDLPPDSPNL 102

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            M+         + +              AP  +   A  + ++E   G D + ++++  
Sbjct: 103 RMLMQTANASQRERYL-------------APYARGETASAIAISEPGAGGDPSMMSTRAV 149

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
           +  D         W   +  +D  I++   +  +G    +   + D    G   +R    
Sbjct: 150 REGDDWTLNGRKIWISKADKADWTIVMVVTDKALGARGGISAFIVDKGTPGFKVERRIPM 209

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG    +T E+   +       LLG       P++       +  A   +   + +L   
Sbjct: 210 IG--GVSTYEVVLEDCRVPGTQLLGQEGAGFAPMQARLSSRRVQMAAWCIGRAQRALDMI 267

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  L ++  ++  +AD A  I A   +++  A   D           AR 
Sbjct: 268 CEYAPQRRTFGAPLAERQAIQWWVADAATRIHACRLMTYDAAARIDAGDE-------ART 320

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K +  +MA  VI  AM+ +G  G  +E  + +   E+    I  G        + 
Sbjct: 321 QVSMIKVFATEMAWEVIDRAMQALGAMGMTKELPLQQMANETRLMRIYEGPSEVHRWVIA 380

Query: 456 NLL 458
             L
Sbjct: 381 RDL 383


>gi|325282594|ref|YP_004255135.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324314403|gb|ADY25518.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 389

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 124/366 (33%), Gaps = 28/366 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---AS 160
             ++R     G    +    +       +  +  A +Y + ++++G   + SV       
Sbjct: 46  REVMRGLGAQGFLGPMTPPEYGGSG--ASSNLYGALMYELDRVDSGIRSAASVQGSLVMY 103

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +      + P + S E             +    GLTE+ GG+D  A+ ++ ++
Sbjct: 104 PIHAYGSEEQRAQYLPGLASGE-------------LIGCFGLTEESGGSDPGAMRTRARR 150

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +SP++D  ++ A+VE   G   V   +      G     ++ K+ 
Sbjct: 151 DGDDWVLDGTKMWITNSPLADLALVWARVE-EGGEDTVRGFIVPTDTPGYSAPIIRRKMS 209

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
            R++ T E+   +        L    G    +  L          ++  + + L  A+ Y
Sbjct: 210 MRASVTGEIVLDSCRVPAGAMLPGVRGLKGPLSCLTGARFGIGWGAMGALELMLTTALDY 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G     + +++  +  +A D +A   L++RL    D  +              
Sbjct: 270 TGSRVTFGQPTASRQLVQDKLVKMATDHSAGLLLAWRLGVLKDAGQ-------MDYAQVS 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K    + A      A E +GG+G   E  + RH           G+ +   L     L
Sbjct: 323 VVKRNNVRRALEGARLARELLGGNGITTEYPVIRHLLNLETVDTYEGTHDIHTLIAGRGL 382

Query: 459 EKGTNL 464
                +
Sbjct: 383 TGQGAM 388


>gi|154271889|ref|XP_001536797.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150408784|gb|EDN04240.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 428

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/291 (24%), Positives = 113/291 (38%), Gaps = 19/291 (6%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           K  ++E        + K       GLTE   G+D  ++ +  +      G Y +SG K W
Sbjct: 141 KFGTQEQKDKYLLDLAKGKKLGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTW 200

Query: 234 FLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELE 290
             +SP+SD F++ A++E  G++  F++ R   D  P G      +KNK   R++ T  ++
Sbjct: 201 ITNSPISDYFLVWAKLESVGKIKGFIIER---DSCPPGTFETPMIKNKTALRASITGMIQ 257

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GG 347
             +        L    G V     L    L  A  S+  +   +  A  YA  R    G 
Sbjct: 258 MDSCPVPETNMLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGN 317

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L+   ++++ +AD A D A  T  +  +A   DE KS  E       M  I K   C  
Sbjct: 318 PLVRYQLVQKKLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDR 370

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 371 ALVGARTLQEIFGGNAVSDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAI 421


>gi|256378403|ref|YP_003102063.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
 gi|255922706|gb|ACU38217.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 380

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 123/360 (34%), Gaps = 31/360 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L  +    G                    +    L L  +  +  L   S    +
Sbjct: 40  PHNQRLYEKMADLGWLGIAIPEEHGGAG------LGMVDLCLFLEESSYGLAPISGFGTT 93

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           ++      +         F  E                 + ++E   G+D+ A+T +  K
Sbjct: 94  IITAAAYEK---------FGTEEQKRAVLGGVVRGRVEAVSMSEPGAGSDVGALTCRADK 144

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKI 279
           +  G        W  ++  +D  +++A+     G    + + +      GL    ++  +
Sbjct: 145 VDGGYVINGQKTWCSNAHFADHVLLIARTSRDEGKHGGLTQFMVPADAEGLRISGIET-M 203

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G R     +L F++ F     ++G        +     L  +  A + +   R +  + +
Sbjct: 204 GGREVN--DLYFTDCFLPDSAVVGVPGQGWAQLMAGLNLERMILAALMLGVARRAFDDTL 261

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYAR 394
            Y R+R   G  +     +K  IAD+A+++  A  L   +A + D    K  + EA+ A 
Sbjct: 262 AYVRQREQFGRPIGSFQALKHRIADMAVELECARLLLDDVAATIDANPGKVFAREASMA- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 K  C ++A     E M+ +GG GY  E  +    R +  +++  G+       +
Sbjct: 321 ------KLKCTELAKHFALEGMQMLGGYGYATEYGMESLLRSAVVSTVYGGTSEIQRDII 374


>gi|33316727|gb|AAQ04622.1|AF443184_3 acyl CoA dehydrogenase [Paracoccidioides brasiliensis]
          Length = 415

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 137/378 (36%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  + WD+    P   +  +  R    GL    ++ +      K     +    +     
Sbjct: 31  PYVQEWDEARAIPEDLYKQMGERGYLAGLMGVAYNPALSKNKVKSVPPEKWDFFHEFIVT 90

Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +     +      +++       P V K    ++  R         +      I L +TE
Sbjct: 91  DELSRAASGGLVWNLIGGFGIGCPPVMKYGKKELIDR-----IVPGILAGEKRICLAITE 145

Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
              G+D++ IT + +   DG  Y ++G K ++++ +   +   A   G  G   +  LL 
Sbjct: 146 PDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMNGISVLLI 205

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           + S  G+  +++ +  G  ++ T  + F +       L+G  N     +        +  
Sbjct: 206 ERSAGGVKTRKM-DCQGMSTSGTTYVTFEDVKVPVENLIGKENQGFKVIMMNFNHERIGI 264

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRL 376
            I  V   RV   E++ YA +R   G  LID PV++  +A +A  I A+        ++ 
Sbjct: 265 IIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQIEASHNWLENIIYQC 324

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARH 433
            +  D   +     A A + A  T  +          EA +  GG  Y        I R 
Sbjct: 325 QSMDDTEAAFRLGGAIAGLKAQSTTTF-----EFCAREASQIFGGLSYTRGGQGEKIDRL 379

Query: 434 YRESPANSILLGSGNAMV 451
           YR   A +I  GS   M+
Sbjct: 380 YRNVRAYAIPAGSEKIML 397


>gi|325092605|gb|EGC45915.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 556

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 103/458 (22%), Positives = 176/458 (38%), Gaps = 78/458 (17%)

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
             A  A  N P L      G   + D +     W  L  R I +G+    +        R
Sbjct: 2   AYAADAEKNQPYLRPLSTFGTENKQDPLVTSEGWRKLQYRGIEEGMVGIAYAN-----AR 56

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 RA       Q    HL + S       AL+T P    D A K+  R  +  N +
Sbjct: 57  GSPWNNRA------YQFIKLHLWTSS------AALVTCPGAMTDGAAKLLGRHLNGANGS 104

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
              +            +   G  +TE++GG+D+    +  +K+S                
Sbjct: 105 IFTEARNRLISRDPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNAGKGVDELGCP 164

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE-------DGSPNGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P           +   NG+  Q
Sbjct: 165 LGPWQLDGFKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVARGAEGETELNGVRIQ 224

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 225 RLKNKLGTKALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLA 284

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF--DEAKSRS---- 387
            +  YA+ R   G +L + P   RA+A   +       L+  +A+     E +  S    
Sbjct: 285 ISRAYAKVRIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSSLTQA 344

Query: 388 -----------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
                      + +A  R++ P+ K      +   +   ME +GG GY+E      ++AR
Sbjct: 345 TQVSILPTNAEQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVAR 404

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQL 468
            +R+    SI  G+ + M  D++ +++  +G      +
Sbjct: 405 IFRDVCVLSIWEGTTDIMADDLVRVMKSRQGPATLAAV 442


>gi|170737120|ref|YP_001778380.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819308|gb|ACA93890.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 384

 Score =  196 bits (499), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 115/356 (32%), Gaps = 28/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  RS   GL                   +       +      +++ P   +  M+  
Sbjct: 50  RLDERSRQLGLWGLDAPLDAGGSDLPAVAMVGV--NEAIGTTVTPYILPPDSPNLRMLCD 107

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    +               P  + +    + ++E   G+D  A+++   +  DG
Sbjct: 108 AADAAQRARYLD-------------PYARGATRAAMAISEPGAGSDPGALSTTAVRDGDG 154

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W   +  +D  I++A  +   G    +   + +    G   +R    IG   
Sbjct: 155 WVLNGRKIWISHAAEADWTIVMALTDRSKGKRGGMSAFIVERDTPGFVIERRIPMIG--G 212

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            +T E+   +       LLG       P++       L+ A   +     ++A    +A+
Sbjct: 213 LSTYEIVLEDCRIPGAQLLGREGAGFAPMQARLANRRLEMAAWCIGRAERAVALLCDHAK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L ++  ++  +AD    I A   +++  A   D  +        AR    + 
Sbjct: 273 QRTTFGVPLAERQAVQWWVADALTQIHACRLMTYEAAARVDAGQD-------ARTQISMV 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  +MA  VI  AM+ +G  G  +E  + +   E+    I  G        V  
Sbjct: 326 KVFATEMASTVIDHAMQTLGAMGMTKEMPLQQMASEARLMRIFEGPTEVHRWVVAR 381


>gi|240279475|gb|EER42980.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 556

 Score =  196 bits (499), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 103/458 (22%), Positives = 176/458 (38%), Gaps = 78/458 (17%)

Query: 72  ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
             A  A  N P L      G   + D +     W  L  R I +G+    +        R
Sbjct: 2   AYAADAEKNQPYLRPLSTFGTENKQDPLVTSEGWRKLQYRGIEEGMVGIAYAN-----AR 56

Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                 RA       Q    HL + S       AL+T P    D A K+  R  +  N +
Sbjct: 57  GSPWNNRA------YQFIKLHLWTSS------AALVTCPGAMTDGAAKLLGRHLNGANGS 104

Query: 190 PMQKT-----------SVAIGLGLTEKRGGTDIAAITSQGQKISD--------------- 223
              +            +   G  +TE++GG+D+    +  +K+S                
Sbjct: 105 IFTEARNRLISRDPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNVGKGVDELGCP 164

Query: 224 -GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLE-------DGSPNGLCYQ 273
            G + L G KWF S+  ++  IMLA+   +G++  F  P           +   NG+  Q
Sbjct: 165 LGPWQLDGFKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVARGAEGETELNGVRIQ 224

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           RLKNK+G ++  T ELE     G+L+G        +  +  +  + +   +V G    LA
Sbjct: 225 RLKNKLGTKALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLA 284

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF--DEAKSRS---- 387
            +  YA+ R   G +L + P   RA+A   +       L+  +A+     E +  S    
Sbjct: 285 ISRAYAKVRIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSSLTQA 344

Query: 388 -----------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIAR 432
                      + +A  R++ P+ K      +   +   ME +GG GY+E      ++AR
Sbjct: 345 TQVSILPTNAEQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVAR 404

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE--KGTNLFEQL 468
            +R+    SI  G+ + M  D++ +++  +G      +
Sbjct: 405 IFRDVCVLSIWEGTTDIMADDLVRVMKSRQGPATLAAV 442


>gi|108804881|ref|YP_644818.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766124|gb|ABG05006.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 404

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 139/380 (36%), Gaps = 31/380 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G+ W++ EF      L+ +    G+          P + + A  I AA L          
Sbjct: 47  GDYWNREEFP---FELVGKFADLGIVGGAIRGYGCPGLSRLAEGIVAAELARADGSINTF 103

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               S  +   +A++ +    + W P +   E                  GLTE   G+D
Sbjct: 104 YGVHSGLAMGTIAMLGSEEQKQRWLPSMARME-------------KIGAFGLTEPEHGSD 150

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPN 268
           +  + +  ++  D        KW  ++  +D  I+ A+   +G V  F+V R   + +  
Sbjct: 151 VVMLETTARREGDEWVLDGRKKWIGNASFADLVIVWARDLSDGEVKGFVVER---EEAGE 207

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
               + +K K G R+    E+E           L  +    +  K+L       A   V 
Sbjct: 208 AFSAEVIKGKTGKRAVWQAEIELRGVRVPHENKLEGANSFKDTSKVLTATRYGVAWEGVG 267

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +   A+ YA+ R +    L    +++  +A++  +I A   + FRLA  F++ K  
Sbjct: 268 HAVAAYEAALAYAKERRIFTRPLESYQLIQNKLANMLSEITAMQLICFRLAQLFEQGK-- 325

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                    MA + K    K A  V  EA + +GG+G + E  + +H  +        G+
Sbjct: 326 -----MTGGMASLAKMHTAKKARQVCLEARDILGGNGLLLEHVVGKHLADVEVVYTYEGT 380

Query: 447 GNAMVLDVLNLLEKGTNLFE 466
                L V   +  GT  F 
Sbjct: 381 DIVQSLIVGREIT-GTQAFA 399


>gi|297625153|ref|YP_003706587.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297166333|gb|ADI16044.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 450

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 74/425 (17%), Positives = 148/425 (34%), Gaps = 45/425 (10%)

Query: 51  PSVVHKELELLGEYVL----SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           P  ++ +   +G  +         +  A M     P ++ Y      W + EF      L
Sbjct: 60  PPEINGDFYDIGALLTPRQREIQLRVRAFMEREVEPIINDY------WQRDEFP---KEL 110

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVA 163
           + +     L   I+D          A  +       MA+++          +  +   + 
Sbjct: 111 IGKFRELDLIKEIFDDEGNRT--PDAAVLEGITGMEMARVDVSTTTFFGVHAGLAMCSIL 168

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKIS 222
           +  +    ++W P+             M++  V    GLTE   G+ I+  +T+  ++  
Sbjct: 169 VGGSEAQRREWLPR-------------MRRFEVIGAFGLTEPEVGSAISQGMTTTCRREG 215

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         W  ++  SD  I+ A+ E           +      G   +++ NKI  R
Sbjct: 216 DTWVLNGEKYWIGNATFSDITIVWARDEADNQVKG---FIVRRDNPGFSVRKIANKIALR 272

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
           +     +   N        L  +T       +  +     A   V     +  +++ YA+
Sbjct: 273 AVENGHITLQNCRVPESDRLQNATSFRTTADVLRMTRAGVAWQGVGCAMGAYEKSLAYAQ 332

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +  +++  +  +  ++ A   + FRLA   D      E+A+ A       
Sbjct: 333 KRLQFGRPIANFQLVQNLLVQMLGNVTAMQTMCFRLAQLQDAGVMTDEQASLA------- 385

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  K     +A A E  GG G + +  +AR++ ++ A     G+     L V   +  
Sbjct: 386 KVFTAKRCRETVALARELHGGKGILLDHHVARYFADTEAIYSYEGTNEINTLVVGRAIT- 444

Query: 461 GTNLF 465
           GT  F
Sbjct: 445 GTGAF 449


>gi|163856246|ref|YP_001630544.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163259974|emb|CAP42275.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 398

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 131/363 (36%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            AL+      GL  +    ++  +    +  H   A          A    +     +  
Sbjct: 53  RALVADLGAAGLLAACVPGAYGGLAPAIESRHLALAREALAYRNGLADFAFAMQGLGSGA 112

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++L  +  +     P++   E  P                L+EK  G+D+AA+TS  ++ 
Sbjct: 113 ISLAGSDELKARLLPQVARGELIP-------------AFALSEKNAGSDVAAMTSSARRD 159

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +         W  +  ++D + +  + E   G   +   L      G       + +  
Sbjct: 160 GEHYVINGEKTWISNGGIADVYTLFVRSEAAPGTRGISAFLVYPDDPGFSIAERIDVMAP 219

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
              AT  L F++        L    +G    M+ L    +  A  ++   R +  EA+ +
Sbjct: 220 HPLAT--LRFTDMRIPATRMLGSPGSGFKLAMRTLDIFRVSVAAAALGFARRAFDEAVAH 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMA 397
           AR R + G  L D  + +  + ++A  I A+  L++R A   D      + EAA A++ A
Sbjct: 278 ARSRQMFGATLADLQITQSRLGEMAAAIDASALLTYRAAWQRDVRQLPTTREAAMAKLSA 337

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A AVI  A++  GG G      +   YRE  A  I  G+     L V   
Sbjct: 338 -------TENAQAVIDAALQMFGGRGVRSGAIMESLYREIRALRIYEGASEVQKLIVARE 390

Query: 458 LEK 460
           + +
Sbjct: 391 VLR 393


>gi|149921726|ref|ZP_01910174.1| probable glutaryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
 gi|149817464|gb|EDM76936.1| probable glutaryl-CoA dehydrogenase [Plesiocystis pacifica SIR-1]
          Length = 397

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 104/363 (28%), Gaps = 31/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+      G      +      +   A+      L  +           +  +   + 
Sbjct: 51  KELIPEFAEMGFLGCSLEGYDCAGLNPVAYGTIMLELERVDSGIRSFCSVQTALAMYPIW 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKI 221
              T    + W P +   E             +    GLTE   G+D  ++ +    +  
Sbjct: 111 AYGTEEQKQKWLPGMAHGE-------------LIGCFGLTEPNSGSDPGSMRTHAKQESE 157

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIG 280
                      W  +SP+S+  ++ A+         V R  + +    GL       K+ 
Sbjct: 158 GGDYILNGQKMWITNSPISNLCVVWAKTLDFGSDAPVIRGFVVERGMKGLSTPETHGKLS 217

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EA 335
            R++ T E+   +         N+  G       L  L  A   +    V  A      A
Sbjct: 218 LRASITGEIVLDDVRVP---KENMLPGVRGLKGPLSCLTQARYGIGWGGVGAAMDVYERA 274

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y   R   G  +    + ++ + ++   I     L+        E K    + ++ + 
Sbjct: 275 RRYTLERVQFGKPIAGFQLTQQKLVEMHNAIGKGLLLAHHCGRLKQEGKLDPVQVSFIKR 334

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                     ++A      A   +GG+G + E  I RH           G+     L + 
Sbjct: 335 D-------NIQLARECAKTARTMLGGNGIMGEFHIMRHLCNLETVYTYEGTHEIHTLAIG 387

Query: 456 NLL 458
             L
Sbjct: 388 RAL 390


>gi|255073815|ref|XP_002500582.1| predicted protein [Micromonas sp. RCC299]
 gi|226515845|gb|ACO61840.1| predicted protein [Micromonas sp. RCC299]
          Length = 455

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 140/452 (30%), Gaps = 44/452 (9%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
               +L    E  +     +  + A+ N      +   GE             +  +S  
Sbjct: 30  AWRAKLRDFFEKEVEPIVDDWDKQASMN-----NHAACGEYV---------KRMYAKSAQ 75

Query: 113 DGL----HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            G+        W   +      + +        L+   E          +      +  P
Sbjct: 76  YGILPACVGKPWPGKYTSAAEPEGYDYF---HELINVDEGTRAGGGIAWAMMGGLGIGMP 132

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            V     P    R                I L +TE   G+D+A +    +   D     
Sbjct: 133 PVLNFGVPG--DRALQDRVVRECLAGEKIICLCITEPGAGSDVANLACTAEDKGDHFLVN 190

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDG-SPNGLCYQRLKNKIGNRSNAT 286
              KW  +   +D F +  +          +  LL +  S  G+   ++ + +G   + T
Sbjct: 191 GNKKWITNGIYADYFTVAVRTGPPGSAHKGLSMLLIERNSSPGITTSKM-DCMGVWPSGT 249

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             +EF N       ++G +      +           A  +    R  + E+I +AR R 
Sbjct: 250 TYIEFDNVKVPKKNVVGRVGDGFKQIMYNFNHERWLLAAQAARMARTCVEESIAFARSRR 309

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  LI+   ++  I ++A       A    +        S+ E+         + K  
Sbjct: 310 TFGKFLIEHQAIQHKIGEMARQCEGLQAWLENVTFQM-NTMSKEEQNRKLGGHIALLKLS 368

Query: 404 CCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++A    + AM+ +GG+GY        + R YRE  A +I  GS   M+         
Sbjct: 369 SSRVAEFCASNAMQVLGGAGYTRSGKGTKVERIYREVKAYAIPGGSEEIML--------- 419

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492
             NL    F  + +       K+I  L+D + 
Sbjct: 420 --NLAAGQFGFVTRRAPDPRDKIIKQLKDELK 449


>gi|311744507|ref|ZP_07718307.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312126|gb|EFQ82043.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
          Length = 623

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 86/562 (15%), Positives = 190/562 (33%), Gaps = 90/562 (16%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
               +  +    +  E++ L    L+ +  +    A+ N P    Y P  +    V  +P
Sbjct: 29  PFEEVDTDTAKSILSEIDRLSRDDLAASFDD----ADRNPPV---YDPAEK---TVTMNP 78

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           A+ A  +  +                V   +     A   L A        +    +  +
Sbjct: 79  AFAASYKAWMDAEWWRLQVPEELGGQVAPASLIWGGAEFVLGANPAIWMYAAGPAFARIV 138

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
                               E D T    M +      + LTE   G+D+ A  ++    
Sbjct: 139 FEN---------------GIERDRTIAGHMIEKQWGATMVLTEPDAGSDVGAGRTKAFPN 183

Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----------VEGRVGCFLVPRLLED-- 264
            DG + + G K F++S   D       ++LA+              +  FLVP++  D  
Sbjct: 184 EDGSWNIEGVKRFITSAEHDMSENIMHLVLARPVGVEGVGGPGTKGLSLFLVPKIHFDHE 243

Query: 265 -----GSPNGLCYQRLKNKIGNRSNATVELEFSN------TFGFLLGDLNVSTGPVEDMK 313
                G  NG     ++ K+G + + T E+ F +        G+LLG+++     +  + 
Sbjct: 244 TGELTGERNGAYVTNVEKKMGIKVSTTCEVTFGDTNLGGPARGWLLGEVHDGINQMFRVI 303

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIAD 361
               +     +++ +      A+ +A+ R                  +   P ++R++  
Sbjct: 304 ENARMFVGAKAIATLSTGYLNALEFAKERVQGADLTQAADKTAPRVTITHHPDVRRSLLT 363

Query: 362 IALDIAAATALSFRLANSFDE-------AKSRSEEAAYARIMAPITKYWCCKMAPAVIA- 413
                    +L    A   D+        +  S   A   ++ P+ K +  + +  ++  
Sbjct: 364 QKAFAEGLRSLMLYTATWQDDVMIKTAAGEDASLSEAINDLLLPLVKGYGSERSWVLLGT 423

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
           E+++  GGSG++++  + ++ R++  +++  G+              G +LF   F  + 
Sbjct: 424 ESLQTFGGSGFLQDYPVEQYVRDAKIDTLYEGTTAIQ----------GQDLF---FRKIV 470

Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533
           +D G +   V   +   I+    + G  R   E+  L +      +A +  +    + + 
Sbjct: 471 KDKGQAIGFVSGEIEKFIAA---ESGNGRLKVER-DLLAKGLEDTQAILGAVFGDLMASN 526

Query: 534 FLDNCHSTHCMLHGRFNAAHII 555
             D       +     N   ++
Sbjct: 527 PADEAGDIQNIYKVGLNTTRLV 548


>gi|145608532|ref|XP_370046.2| hypothetical protein MGG_06561 [Magnaporthe oryzae 70-15]
 gi|145015999|gb|EDK00489.1| hypothetical protein MGG_06561 [Magnaporthe oryzae 70-15]
          Length = 426

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 65/287 (22%), Positives = 105/287 (36%), Gaps = 15/287 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLS 236
           S E        M    +    GLTE   G+D A++ +  +      G Y LSG K W  +
Sbjct: 140 STEQKERFLPQMAAGKLLGAFGLTEPNHGSDPASMETVARPHPTKKGFYSLSGSKTWITN 199

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDG--SPNG-LCYQRLKNKIGNRSNATVELEFSN 293
           SP++D  ++ A++    G   +   L +    P G L    +KNK G R++ T  +   N
Sbjct: 200 SPIADILLVWAKLADGEGPSKIRGFLVERKNCPPGTLETPAIKNKTGLRASLTGMIHLDN 259

Query: 294 TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                       TG       L       A+  +  +   +A    YA  R   G  L  
Sbjct: 260 CPIPEENMFPTVTGLKGPFTCLNSARFGIAMGVMGALEDCIAATREYALERSQFGRPLAS 319

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD A D A  +  + ++    DE KS  +       M  + K   C  A   
Sbjct: 320 FQLVQKKLADAATDAAYGSLAAIQVGRLIDEGKSVPD-------MISMVKRENCDRALRN 372

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                E +GG+   +E  I RH           G  +   L +   +
Sbjct: 373 ARTLQEVLGGNAVSDEYRIGRHVANLFVTQTYEGQSDIHSLILGRAV 419


>gi|119493314|ref|XP_001263847.1| glutaryl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL
           181]
 gi|119412007|gb|EAW21950.1| glutaryl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL
           181]
          Length = 431

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 84  RKILEEMGELGLLGASIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIY 143

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              T      + P++              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 144 EFGTQEQKDRFLPQL-------------AKGKLAGCFGLTEPNHGSDPGSMETTAREHPT 190

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG   W  +SP++D  ++ A+    G++  F+V R      P G L    +KN
Sbjct: 191 KKGYYLLSGAKTWITNSPIADIMLVWAKLQTTGKIKGFIVER---SQCPPGTLQTPAIKN 247

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           K   R++ T  ++  +                          L  A  ++  +   +  A
Sbjct: 248 KTALRASITGMIQMDDCPVPAENMFPDVEGLKGPFTCLNSARLGIAFGAMGALEDCIDRA 307

Query: 336 IHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
             YA  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E      
Sbjct: 308 RTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDAGKSTPE------ 361

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A A      E  GG+   +E  I RH           G  +   L +
Sbjct: 362 -MISMVKRQNCDRALANARLLQEIFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHALIL 420

Query: 455 LNLL 458
              +
Sbjct: 421 GRAI 424


>gi|218673025|ref|ZP_03522694.1| putative acyl CoA-like DNA repair protein [Rhizobium etli GR56]
          Length = 216

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 105/183 (57%), Positives = 137/183 (74%)

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D+A+  +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IARHYRE
Sbjct: 30  CRCIDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIARHYRE 89

Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496
           +P N+I  GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I+LC++
Sbjct: 90  APVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQ 149

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556
           D+G AR L E++ALA+ AA LYR G   IAD F+E R      ST+ ML  RF+A++I+D
Sbjct: 150 DEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVD 209

Query: 557 SLY 559
            LY
Sbjct: 210 LLY 212


>gi|240281703|gb|EER45206.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 345

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 65/296 (21%), Positives = 112/296 (37%), Gaps = 9/296 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFL 235
           K   +E        +      I L +TE   G+D++ I+ + +   DG  Y ++G K ++
Sbjct: 48  KYGKKELVNRILPGILAGDKRICLAITEPDCGSDVSNISCEAKLTPDGKHYIVNGEKKWI 107

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           ++ +   +   A   G  G   +  LL + S  G+  +++ +  G  ++ T  + F +  
Sbjct: 108 TNGIWSDYFTTAVRTGEPGMNGISVLLIERSAGGVGTRKM-DCQGMATSGTTYVTFEDVK 166

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                L+G  N     +        +   I  V   RV   E++ YA +R   G  LID 
Sbjct: 167 VPVENLIGKENQGFKVIMMNFNHERMGIIIQCVRFSRVCYEESVKYAHKRQTFGKRLIDH 226

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           PV++  +A +A  I A+      L     ++   +E A          K           
Sbjct: 227 PVIRMKLAHMARQIEASHNWLENLVFQC-QSMDDTEAAFRLGGAIAGLKAQSTTTFEFCA 285

Query: 413 AEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            EA +  GG  Y        I R YR+  A +I  GS   M+   +    K    F
Sbjct: 286 REASQIFGGLSYTRGGQGGKIERLYRDVRAYAIPGGSEEIMLDLSMRQSLKVHQFF 341


>gi|114675643|ref|XP_001170229.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 4 [Pan
           troglodytes]
          Length = 417

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 101 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 147

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 148 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 207

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 208 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 260

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 261 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 320

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 321 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 373

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 374 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 407


>gi|219667082|ref|YP_002457517.1| acyl-CoA dehydrogenase [Desulfitobacterium hafniense DCB-2]
 gi|219537342|gb|ACL19081.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 383

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 118/289 (40%), Gaps = 17/289 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E      A +Q+  VA  LG TE + G+D +A  +   +  +G   ++GHK F+S  +
Sbjct: 101 SEEQIADTMAVVQRGGVAFVLGFTEPQAGSDSSAAATTYTRR-NGKVYINGHKTFMSGAL 159

Query: 240 SDAFIM-LAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
              +++ LA+     G               +  G+  ++L+ KIG     T E+   + 
Sbjct: 160 RAPYMLCLARNSEEAGNADKRNAFSMWWVPMNAPGIKIEKLE-KIGWHMQDTCEVYLEDV 218

Query: 295 FGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                  + V   G ++ +    +  L  A   +     +  +A+ YA +R   G  +  
Sbjct: 219 EVEEKDLVGVEGNGFMQVLYNFEMERLLMAASVLGMAECAFEDAVRYANQRVQFGKTIGS 278

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  I  +   I     + ++ A   D            +I + I K +C + A  V
Sbjct: 279 FQLIQEKITFMKAKIENMKNMVYKCAWEVDNGLP-------VQISSAIAKLYCAQAANEV 331

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I +A++ +GG GY ++  I+R + ++    I  G+   M+      + K
Sbjct: 332 IDDALQIMGGIGYTKDARISRLWLDARVFRIGGGTDEIMIHAAGRAILK 380


>gi|119482203|ref|XP_001261130.1| acyl-CoA dehydrogenase [Neosartorya fischeri NRRL 181]
 gi|119409284|gb|EAW19233.1| acyl-CoA dehydrogenase [Neosartorya fischeri NRRL 181]
          Length = 437

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 123/333 (36%), Gaps = 24/333 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +A   T    + W PK+              +  +   LG+TE   G
Sbjct: 120 WGLGGGNSIGCPPIARFGTTEQRRRWLPKV-------------ARGDIRFCLGITEPDAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  +   D        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 167 SDVANIQTTARLDGDHYIVNGAKKW-ITNGIWADYCTAAVRTGGPGRGGISLLVIPLTAP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  +EF +       L+G  N     +        L  A  ++
Sbjct: 226 GVTRRRMHNS-GVNASGSTFIEFDDVRVPVDNLIGKENKGFPIIMSNFNPERLTLACAAL 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A HYA +R   G  LI +  ++  +    L I  A A   +L N  +  K 
Sbjct: 285 RLARVCAEDAFHYAVQRETFGAPLIQRQAIQSKVFKFGLMIEPAYAFMEQLVNIIELTKD 344

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSI 442
           R  +      M  + K    +     + EA + +GG+GY +      I +  R+   + +
Sbjct: 345 RPADDVKIGGMTALLKVMSTRALEKSVREAQQILGGAGYNKSGKGARIEQISRDVRVHVV 404

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
             GS   M   +   L++ T   +     LE+ 
Sbjct: 405 GGGSEEIM---MGLALQEETKALKTRRQALEKR 434


>gi|114675641|ref|XP_001170249.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 5 [Pan
           troglodytes]
          Length = 426

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 110 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 156

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 157 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 216

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 217 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 269

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 270 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 329

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 330 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 382

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 383 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 416


>gi|302660472|ref|XP_003021915.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517]
 gi|291185835|gb|EFE41297.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517]
          Length = 633

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 23/292 (7%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           +  S E        + +  +    GLTE   G+D  ++ +  +      G + LSG K W
Sbjct: 143 EFGSEELKQRLLPQLAQGKLLGCFGLTEPNHGSDPGSMETVARPHPTKKGFFSLSGTKTW 202

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFS 292
             +SP+SDAF++ A+++G++  F+V R   D  P G L    +KNK   R++ T  ++  
Sbjct: 203 ITNSPISDAFLVWAKLDGKIRGFVVER---DQCPEGTLRTPAIKNKTALRASITGMIQMD 259

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
           N            TG V        L+SA + ++      +   ++ A  YA  R    G
Sbjct: 260 NCPVPETNMFPEVTGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKG 316

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++A   DE K+  E       M  + K   C 
Sbjct: 317 NPLAKYQLVQKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCD 369

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A      E  GG+   +E  I RH           G  +        LL
Sbjct: 370 RALAGSRTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSEFFTILL 421


>gi|307325800|ref|ZP_07605000.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306888588|gb|EFN19574.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 390

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 12/283 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E       P  +      + +TE+  G+D + I +   +  DG Y L+G KWF++   + 
Sbjct: 103 EQRERYLVPDIEGRRRDAVAITEEHAGSDPSGIRTTATRDGDG-YVLNGEKWFVTVGDAA 161

Query: 242 AF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
            F I+LA V            L D    G+  +R             E  F +       
Sbjct: 162 DFLIVLAYVRPDNEP---TMFLVDKDTPGVSVKRTPRYTHTFVYEHPEFLFQDVRVGQDA 218

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG +        D      L  A  ++     +L  A+ +A+ R   G +L+++ +++ 
Sbjct: 219 VLGRIGEGYDLTRDWFTEERLMIAARTIGAAERALRLAVDWAKEREQGGDVLMNRQLIQG 278

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD   +IA   A + ++A  FD+   R          A   K    + +  ++   ++
Sbjct: 279 MIADSVTEIATNRAFTHQVAWEFDQGGDRKT----LHAKAATAKLAASEASNRIVDRCVQ 334

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             GG GY+ +  + R +RE   + I  G+     L + N + K
Sbjct: 335 IFGGRGYMRDMPVERLWRELRVDRIWEGTSEIQRLVIANEVGK 377


>gi|294877938|ref|XP_002768202.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239870399|gb|EER00920.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 432

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 144/380 (37%), Gaps = 23/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGL-HCSIWDRSFEPVVRKQAHK----IRAARLYLM 143
           P  + W++ +  P    + ++    GL  C + +R FE V    A K         L L+
Sbjct: 50  PYVKDWEEAKKIPT--DVYQKLYRAGLTPCVVGERGFEFVDSSVAPKPEDYDVFHELILL 107

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +L                ++  TP V     P +              +    I L +T
Sbjct: 108 DELSRCGSGGVVGGLIVGYSIGLTP-VMNFAHPSV-----RDRVVPACLRGDKFISLAIT 161

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E + G+D+A+I +  +  +DG  Y ++G K ++++ +   +   A   G  G   +  LL
Sbjct: 162 EPQTGSDVASIRATAKLSADGKHYIVNGEKKWITNGIFSDYFTTAVRTGPEGMNGISVLL 221

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD---LNVSTGPVEDMKILIYLD 319
               P G+  +++ +  G  S+ T  +EF++    +       N     +          
Sbjct: 222 IPKGP-GVTVRQM-DCQGVWSSGTTFVEFNDVKVPVENMLGKENEGFKVIMYNFNHERWG 279

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             + +V   R+    +  YA++R   G  LI+ P+++  +A++A  I  A A    L + 
Sbjct: 280 FVVQAVRFSRLLYEVSFKYAQKRKTFGKTLIEHPLIRWKLAEMARQIEGAHAWMESLTHQ 339

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRE 436
                 + +          + K  C KM      EA +  GG+ Y        + R YR+
Sbjct: 340 LCTMPPK-QAVLMLGGPLALCKAHCTKMFEYCAREASQIFGGNAYTRSGLGEVVERLYRD 398

Query: 437 SPANSILLGSGNAMVLDVLN 456
             A +I  GS   M+   + 
Sbjct: 399 VRALAIPGGSEEIMLDLAVR 418


>gi|114675647|ref|XP_001170189.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 2 [Pan
           troglodytes]
 gi|114675649|ref|XP_001170211.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 3 [Pan
           troglodytes]
          Length = 359

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 43  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 89

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 90  AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 149

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 150 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 202

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 203 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 262

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 263 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 315

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 316 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 349


>gi|184199718|ref|YP_001853925.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183579948|dbj|BAG28419.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 400

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 126/381 (33%), Gaps = 37/381 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            E +D   F       + +    G+H   +  +    V    + +  A L          
Sbjct: 52  AEWYDNAVFPLEIVPEMAKLGLLGMHLKGYGCAGRSAVE---YGLAGAELEAGDSGLRTF 108

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +      + S +    +    + W P++ + E                  GLTE   G+D
Sbjct: 109 VSVQGSLAMSAIYKWGSEEQKQQWLPRMAAGE-------------AIGCFGLTEPTAGSD 155

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            +++ +  +K  +        +W   + ++   ++ AQ +  +  F+VP         G 
Sbjct: 156 PSSMKTFARKDGEDWVINGAKRWIGLASVAKVAVIWAQTDDGIRGFVVPT-----DTPGF 210

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV----- 325
               +  K+  R++   ++E ++        L  + G          L+ A   +     
Sbjct: 211 KATPITAKLSMRASIQCDIELTDVRLPASAMLPEAKGLR---GPFSCLNEARYGIIWGAM 267

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R S   A+ Y++ R      L    + ++ + ++AL+I     L+ +L    D  K 
Sbjct: 268 GAARDSFEAALAYSQERMQFDRPLSGYQMTQQKLVNMALEIDKGFLLALQLGRLKDAGK- 326

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                        + K   C+ A  +  EA   +GG+G   + S  RH     +     G
Sbjct: 327 ------LQNHQISVGKLNNCREAIKIAREARTILGGNGVTLDYSPLRHANNLESVRTYEG 380

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +     L +L     G   F 
Sbjct: 381 TDEVHSL-ILGQQLTGVGAFR 400


>gi|170748892|ref|YP_001755152.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655414|gb|ACB24469.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 414

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 117/287 (40%), Gaps = 28/287 (9%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
            +      + L+E   G+D+A + ++  +  D        +W   +  +D   +LA+   
Sbjct: 130 ARGQWIGSISLSEPDAGSDLAGVQTRAVRDGDRWRLTGTKRWAGFAKGADFIEVLARTRD 189

Query: 250 --EGRVGCFLVPRLLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL- 302
              G      +   L     D  P G+   R+ +KIG     T EL   +        L 
Sbjct: 190 PEPGEPRSAGLEPFLVLKERDSFPPGVT-GRVIDKIGYHGFQTFELRLEDVCVPESDRLT 248

Query: 303 -----------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                      +     V+    +  + +A  +V   R ++ +   Y + R   G  + D
Sbjct: 249 GLYGDQGADADSGGFAAVQRGLNIARVHTAARAVGVARAAVEDCQSYLQERVQFGHPIGD 308

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++ A+AD+A D+A A A   ++A+  D+ +    E+A  +++A        +MA  V
Sbjct: 309 FQALRFALADMAADVAQARAFWHQVAHLLDQGEPAESESAMVKLLA-------TEMAVRV 361

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +AM+  GG+GY  ER + R++R++   +I  G+       + + +
Sbjct: 362 TNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGTSEIQRRIISDRM 408


>gi|325528590|gb|EGD05688.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 384

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 113/356 (31%), Gaps = 28/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  RS   GL                   I       M      + + P   +  M+  
Sbjct: 50  RLDERSKQLGLWGLDAPLDLGGADLPALAMIGV--NEAMGATVTPYTLPPDSPNLRMLRD 107

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                    +              AP  +      + ++E   G+D +A+T+   +  D 
Sbjct: 108 TADDAQRDRYL-------------APYARGITRAAMAISEPGAGSDPSAMTTTAARDGDA 154

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W   +  +D  I++A  +   G    +   + +    G   +R    IG   
Sbjct: 155 WVLNGRKIWISHARDADWTIVMALTDRSKGKRGGISAFIVERDTPGFVVERRIPMIG--G 212

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            +T E+   +       LLG       P++       L  A   +     ++A    YA+
Sbjct: 213 LSTYEIVLQDCRIPAAQLLGREGDGFAPMQARLANRRLQMAAWCIGRAGRAVALLCDYAK 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  L ++  ++  +AD    I A   ++   A   D  +        AR    + 
Sbjct: 273 QRKTFGVPLAERQAVQWWVADALTQIHACRLMTLEAAARVDAGQD-------ARTQISMV 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  +MA +VI  AM+ +G  G  +E  + +   E+    I  G        V  
Sbjct: 326 KVFATEMASSVIDHAMQTLGAMGMTKELPLQQMASEARLMRIFEGPSEVHRWVVAR 381


>gi|294868768|ref|XP_002765685.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239865764|gb|EEQ98402.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 433

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/382 (18%), Positives = 135/382 (35%), Gaps = 18/382 (4%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+K +  P    +  +    GL  S+      P     A  + AA+         
Sbjct: 51  PNVSEWEKEKAIPM--EIYAKCYRAGLLPSL----VGPKGYDYADPVVAAKPQGFDYFHE 104

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEK 205
              +       S   +           P +    + E       P  +    I L +TE 
Sbjct: 105 LIFIDELCRCGSGGVMWGMMGGLNIGLPTVLNFGTPEMKARVAPPCVRGEKNICLCITEP 164

Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
             G+D+A+I +  +   DG  Y ++G K ++++ +   +  +A   G  G   +  LL +
Sbjct: 165 HAGSDVASIRTTAKLTPDGKHYIVNGQKKWITNGIFSDYFSVAVRTGGPGMKGISMLLVE 224

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL   R+ +  G  S+ T  +E  +       L+G  N     +            
Sbjct: 225 RGMPGLRTTRM-DCQGVLSSGTTFVELDDVKVPVENLIGKDNDGFKVIMYNFNHERWGLI 283

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I ++   R+    +  YA++R   G  L++ PV++  +A+++  I   +     + +   
Sbjct: 284 IQALRFSRILYELSFKYAQKRKTFGKTLMEHPVIRWKLAEMSRQIEGTSHWLESVTHQMS 343

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESP 438
                    A    +A + K    K+      EA +  GG+ Y        + R YR+  
Sbjct: 344 TMPWVESMDALGGTIALM-KAHSTKVFEYCAREAAQIFGGNAYTRSGLGEVVERLYRDVR 402

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             +I  GS   ++   +   ++
Sbjct: 403 GLAIPGGSEEILLDLGIRQADR 424


>gi|94967495|ref|YP_589543.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549545|gb|ABF39469.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 560

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 124/404 (30%), Gaps = 39/404 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+        +                  +  L     +  +   +  + +  TP   K 
Sbjct: 51  GIQLLFIPEEYGGFGGGAFDVYCICEAMAVVDLGIATSLFATFLGSDPLTVGGTPEQKKH 110

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----GIYCL 228
           W  +I                 +    G TE   G+D+ A+ +   ++ D     G    
Sbjct: 111 WLGRI-------------GNEGILFAYGATEPDAGSDLGALRTTADRVMDAERVVGYRID 157

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W  +  ++DA+ +LA        F+V     +    G  + + +NK G R++ T  
Sbjct: 158 GLKQWISNGGIADAYTILANTPAGPSWFVV-----EKGAPGFTHDKPENKHGIRTSNTAA 212

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L   N +      + G         + +     L  A   +     +L  AI Y+ +R  
Sbjct: 213 LALQNVYVNADRLIGGVEGQGLLQAQAVFGYTRLMVAAFGLGSGWAALDRAIPYSTKRIQ 272

Query: 345 SGGILIDQPVMKRAI-ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
            G  L ++      +    A  + A+ A     A   D+ +              I KY 
Sbjct: 273 GGAPLSEKQGYTHKLIVPNAARLEASRAFIEETAERIDKGEGS------LNTEGAIAKYM 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-----LL 458
             +         ++ +GG GY  E  I +  R+    +I  G+   M + +        L
Sbjct: 327 ATEAGNTTAECCIQALGGYGYTHEYMIEKIKRDVRITTIYEGTSEIMEMTISRDRWQLHL 386

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502
           +     +  +    E       +    +   ++    E    AR
Sbjct: 387 KTRGQHYHDVAKEAETLHARHPEVGADVAALALHALAEILERAR 430


>gi|281414311|ref|ZP_06246053.1| butyryl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 397

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/392 (19%), Positives = 137/392 (34%), Gaps = 51/392 (13%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            VLS T +E A       P                 H   + ++ +    GL    +   
Sbjct: 16  QVLSDTVREFADEV--VAPVSAELDA---------KHEFPYEIVAQMGEMGLFGLPFPEE 64

Query: 124 FEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           +  +         A   L  + Q  A  L +     A  +    T    + W P + +  
Sbjct: 65  YGGMGGDYFALALALEQLGRVNQSVAITLEAGVSLGAMPLLKFGTEEQKQRWLPDLVAGT 124

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +               G GLTE   G+D     +    + DG + ++G K F+++  +D 
Sbjct: 125 H-------------LAGFGLTEPGAGSDAGGTQTTA-ALEDGQWRINGAKEFITNSGTDI 170

Query: 243 ---FIMLAQV---EGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
                + A     EGR G        +  +L      G    +  +K+G  S+ T  L F
Sbjct: 171 TSLITVTAVTGTVEGRTGHDGRPAKEISTILVPAGTEGFSVAKAYDKVGWNSSDTHALHF 230

Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSG 346
           ++        L        +   L  LD   ++++ +     +  + E++ YA++R   G
Sbjct: 231 TDARVPEENLLGARGRGFANF--LEILDEGRIAIAALATGAAQGCVDESVAYAKQRTSFG 288

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     +   IA +     AA    +  A      K    EAA A+++A        +
Sbjct: 289 QKIGQFQAVSFKIARMQARAHAARLAYYEAAQKMLAGKPFKTEAAMAKLIAG-------E 341

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            A     +A +  GG G++ E  +ARHYR+S 
Sbjct: 342 AAMDNARDATQVFGGYGFMNETLVARHYRDSK 373


>gi|134298441|ref|YP_001111937.1| crotonobetainyl-CoA dehydrogenase [Desulfotomaculum reducens MI-1]
 gi|134051141|gb|ABO49112.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens
           MI-1]
          Length = 377

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 13/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +   +  DG   L+GHK F++S     ++++   +          
Sbjct: 122 AITEPGAGSDVGSLQTTYTRK-DGKVYLNGHKCFITSGAGVPYLVVMAKDSENSKIFTEW 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIY 317
              D +  G+  ++L  K+G R ++  E+ F N                + +K       
Sbjct: 181 F-VDMTKPGIKIEKLP-KLGLRMDSCCEIYFDNVELEEKDMFGKEGNGFQRVKEEFDFER 238

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 +      +  +A  YA +R   G  +    +++   A +A+ +     + +  A
Sbjct: 239 FLVGCTNYGTALCAFEDAAKYANQREQFGEKIGRYQLIQEKFAHMAIKLTNMRNMLYEAA 298

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D     S EAA         KY+C   A  V+ +AM+ +GG G   +  I+R +R+ 
Sbjct: 299 WKYDNGIMGSGEAAM-------CKYYCANAAFEVVDQAMQVLGGYGIAGDHRISRFWRDL 351

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  G+    +L     + K
Sbjct: 352 RVDRVSGGTDEMQILTAGRQVLK 374


>gi|118465800|ref|YP_882857.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167087|gb|ABK67984.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 418

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 119/317 (37%), Gaps = 36/317 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +A   T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 118 AATIASRGTLAQKERWLPELMTLE-------------KIAAWAITEPDSGSDAFGGMKTS 164

Query: 218 GQK--ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNG 269
            ++    DG Y L+G K F+++   +D  ++ A+++            V   + D    G
Sbjct: 165 VRRSGDGDGAYILNGQKTFITNGPYADVLVVYAKLDEGDPSVDKRNRSVLVFVLDAGMPG 224

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVS 326
           L   +   K+G  S+ T EL F N        L  S    E   +     + A   + ++
Sbjct: 225 LTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGESEQHTEGDGRDSARANFAAERIGIA 284

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + + +      + YA+ R + G  +    +++  +A + +       + F       
Sbjct: 285 MMALGIIDECHRLCVDYAKSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMVFHTIERQQ 344

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  
Sbjct: 345 AGKPLTLAEASAIKL------YSSEAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLM 398

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS    V  +   L
Sbjct: 399 IYAGSNEVQVTHIAKGL 415


>gi|159128016|gb|EDP53131.1| glutaryl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 431

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 84  RKILEEMGELGLLGASIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIY 143

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              T      + P++              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 144 EFGTQEQKDRFLPQL-------------AKGKLAGCFGLTEPNHGSDPGSMETTAREHPT 190

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG   W  +SP++D  ++ A+    G++  F+V R      P G L    +KN
Sbjct: 191 KKGYYLLSGAKTWITNSPIADIMLVWAKLQTTGKIKGFIVER---SQCPPGTLQTPAIKN 247

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           K   R++ T  ++  +                          L  A  ++  +   +  A
Sbjct: 248 KTALRASITGMIQMDDCPVPAENMFPDVEGLKGPFTCLNSARLGIAFGAMGALEDCIDRA 307

Query: 336 IHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
             YA  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E      
Sbjct: 308 RTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDAGKSTPE------ 361

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A A      E  GG+   +E  I RH           G  +   L +
Sbjct: 362 -MISMVKRQNCDRALANARLLQEIFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHALIL 420

Query: 455 LNLL 458
              +
Sbjct: 421 GRAI 424


>gi|296140732|ref|YP_003647975.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028866|gb|ADG79636.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 402

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 105/319 (32%), Gaps = 25/319 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +      +   + ++ +    + W P              M +        LTE   G
Sbjct: 107 TFIGVHVGLAMQSIYILGSEEQRQRWLP-------------AMARLEKIGAFALTEPNHG 153

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  A+ +   +  D        +W  ++   D  I+ A+             + +    
Sbjct: 154 SDSVALEATATRDGDHWVINGAKRWPGNAVWCDIIIVFARDTADGKVKG---FVVEKDDP 210

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           G    ++  K+  R     ++   +        L    G  +  K+L+      A  S  
Sbjct: 211 GYRATKIGGKVSLRMVQNADIVLDDLRIPDDRRLVNCNGFPDVSKVLMGTRNQVAWASTG 270

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +   A++YA++R   G  + +  V++  + ++  ++ A      RL    DE    
Sbjct: 271 HAVAAYEIALNYAQKRVQFGKPIANTQVVQSKLVEMLGEVTAMQLYCIRLGRLLDEG--- 327

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A    MA + KY+C   A  V   A + +GG+G   E  + RH  +  A     G+
Sbjct: 328 ----AVTDTMAALAKYFCSVKARHVCRLARDVLGGNGITLEFHVMRHLCDMEALVTYEGT 383

Query: 447 GNAMVLDVLNLLEKGTNLF 465
                L V   +  G    
Sbjct: 384 AEIQSLLVGREITGGGAFV 402


>gi|31792164|ref|NP_854657.1| acyl-CoA dehydrogenase FADE13 [Mycobacterium bovis AF2122/97]
 gi|31617752|emb|CAD93861.1| PROBABLE ACYL-COA DEHYDROGENASE FADE13 [Mycobacterium bovis
           AF2122/97]
          Length = 369

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 108/285 (37%), Gaps = 17/285 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                    V ++     +  P +      ++ +    PT             L +TE  
Sbjct: 76  MHQAGAPGGVYASLFTCGIAVPHMVASGDERLIATYVRPTL-----AGEKIGALAITEPG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           GG+D+  + +   +  D  Y ++G K +++S +   +++ A   G  G   V  L+ +  
Sbjct: 131 GGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVSLLVVEKD 189

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G    R  +K+G RS+ T EL +++       L+G  N     +    +   +  A  
Sbjct: 190 TPGFEVTRKLDKMGWRSSDTAELCYTDVAVPATNLVGAENSGFTQIARAFVSERIGLAAQ 249

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + S  +  L     + R R   G  LI +  ++  +A++A  I  A   +  +       
Sbjct: 250 AYSSAQRCLDLTAQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYAHHVVERQLAG 309

Query: 384 KSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           ++    +  +A+  A     W       V  +A++  GG GY+ E
Sbjct: 310 ETDLIAQVCFAKNTAVQAGEW-------VANQAVQLFGGMGYMAE 347


>gi|254776115|ref|ZP_05217631.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 418

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 119/317 (37%), Gaps = 36/317 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +A   T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 118 AATIASRGTLAQKERWLPELMTLE-------------KIAAWAITEPDSGSDAFGGMKTS 164

Query: 218 GQK--ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNG 269
            ++    DG Y L+G K F+++   +D  ++ A+++            V   + D    G
Sbjct: 165 VRRSGDGDGAYILNGQKTFITNGPYADVLVVYAKLDEGDPSVDKRNRSVLVFVLDAGMPG 224

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVS 326
           L   +   K+G  S+ T EL F N        L  S    E   +     + A   + ++
Sbjct: 225 LTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGESEQHAEGDGRDSARANFAAERIGIA 284

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + + +      + YA+ R + G  +    +++  +A + +       + F       
Sbjct: 285 MMALGIIDECHRLCVDYAKSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMVFHTIERQQ 344

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  
Sbjct: 345 AGKPLTLAEASAIKL------YSSEAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLM 398

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS    V  +   L
Sbjct: 399 IYAGSNEVQVTHIAKGL 415


>gi|258511194|ref|YP_003184628.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477920|gb|ACV58239.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 383

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 124/366 (33%), Gaps = 26/366 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           WD+    P    L R     GL       S+            AA         A + + 
Sbjct: 31  WDRTGAFP--RDLWRAMGRLGLTGLRVSPSYGGSGADCLTTGIAAEEIARGDFNAAYAVV 88

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   A ++    +  V ++W              APM      I + +TE   G+D+A 
Sbjct: 89  LNALLAEVLEAHASEVVKREWL-------------APMAAGERLIAIAITEPGAGSDVAQ 135

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           I ++ ++  D             + ++DAF++ A+ +   G   V   L      G+   
Sbjct: 136 IAARAERDGDRYVLTGEKSGISLASVADAFVVFAKTQMDAGARGVSAFLVPREAPGVSVH 195

Query: 274 RLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R ++ +GN +     + F      +   +G+ N +   +     L  +   +  +     
Sbjct: 196 RYED-LGNVAIGRGSVFFERVEVPVDHRIGEENRAFYQLMRGFDLSRVLICLQCLGAAMQ 254

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           SL E   + RRR   G  L     +   + +    I      S+R     D     ++EA
Sbjct: 255 SLDETADHVRRRRAFGRPLAQFQGVAFPLVEYHTQIEMIRWFSYRALWLRDRGLPHTKEA 314

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +  + + P       ++A   I E +   G  GY ++  + +  R+     I  G+    
Sbjct: 315 SMCKWLGP-------QVAAQAIHECILLHGHYGYTKDLPLEQRLRDVIGLEIGDGTAQTQ 367

Query: 451 VLDVLN 456
            + +  
Sbjct: 368 KIVIAR 373


>gi|254476399|ref|ZP_05089785.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11]
 gi|214030642|gb|EEB71477.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11]
          Length = 386

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 107/312 (34%), Gaps = 24/312 (7%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  T    ++W P               +         LTE + 
Sbjct: 86  ADFAFAMQGLGTGAISLFGTQAQQQEWLPL-------------TRAGKAMSAFALTEPQS 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T       D         W  +  ++D + + A+     G   +   +     
Sbjct: 133 GSDVANSTMTATLDGDSYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFIVPAGL 192

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMS 324
            G       + I         L FS+        L     G    M +L       A  +
Sbjct: 193 PGFEVVERLDTIAPH--PLARLRFSDCRIPKSALLGQSGQGFKIAMSVLDVFRSTVAAAA 250

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L EA+     RHV G  L D  +++  IAD+ALD+ AA  L +R A + D   
Sbjct: 251 LGFARRALDEALSRVSARHVQGAPLADLQMVQGHIADMALDVDAAALLVYRAAWAKDSG- 309

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                +A     A + K +    A  VI +A++  GG G      +   YR+  A  I  
Sbjct: 310 -----SARITREAAMAKLFSTDQAQLVIDKAVQLHGGDGVRRGEKVEELYRDIRALRIYE 364

Query: 445 GSGNAMVLDVLN 456
           G+ +   + +  
Sbjct: 365 GASDVQRVVIAR 376


>gi|331236165|ref|XP_003330742.1| glutaryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309309732|gb|EFP86323.1| glutaryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 429

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 111/333 (33%), Gaps = 32/333 (9%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  +  +       +   S      +    +      + P++ S           
Sbjct: 116 AYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAFGSEEQKSKFLPELASGNM-------- 167

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE 250
                    GLTE   G+D + + ++  +   G Y LSG K W  ++P++D F++ A+ +
Sbjct: 168 -----IGCFGLTEPGHGSDPSGMLTRATEDPSGGYILSGSKTWITNAPIADVFVVWAKCD 222

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                      + +    GL   ++++K+  R++AT  +   +        L   TG   
Sbjct: 223 WDQKIRG---FILEKGMKGLSAPKIEHKLSLRASATGSIYMDSVPVPSTNVLPKVTGLK- 278

Query: 311 DMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                  L+SA   +       +   +  +  Y+  R      L    ++++ + D   +
Sbjct: 279 --GPFACLNSARFGISFGVMGALEECVKRSREYSLERIQFNKPLAAFQLIQKKLVDANTE 336

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                  + +L    D      E       M  + K   C  A       M+  GG+   
Sbjct: 337 AVIGLCAAIQLGRMKDAGTWCPE-------MVSLLKRNNCGKALHHARILMDIFGGNAVS 389

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +E  I R        +   G+ +   L +   +
Sbjct: 390 DEYHIGRIAANLHVANTYEGTHDIHTLILAKAI 422


>gi|296271156|ref|YP_003653788.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093943|gb|ADG89895.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 381

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 121/356 (33%), Gaps = 26/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R+    G         +        H      L  +A+             A +  L
Sbjct: 44  ELNRKIAELGWAAINLPEEYGGAGGD--HVDLCILLEELARG-----------MAPLPWL 90

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            TT  V   +    F+ E              A+ + ++E   G+D AAIT + ++ SDG
Sbjct: 91  GTTLIVGGIY--NRFAAEPLKRAVLGRIAEGAAMAISISEPEAGSDAAAITCRAERTSDG 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W  ++  +D  +++A+  +G      +          GL  + +    G   
Sbjct: 149 WVINGQKTWCTNAHAADGILLVARTSQGEKKHHGLTMFHVPRETPGLTIKPIDTMNGPEV 208

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYAR 340
           N    L F++        +         + +      L  A  ++     +  + + + R
Sbjct: 209 ND---LYFTDCVLPEDAVVGEVDAGWRQLMVGLDTERLILAANTLGIAERAFDDCLEFVR 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +K  +AD+A +I  A  L + +A   D+              + + 
Sbjct: 266 ERRQFGRPVGSFQAIKHRLADLATEIEYARLLVYSVARQADDPDRTRP----LTRESSMA 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K    ++A A+  E M+ +GG GY  E ++ +H R +   +I  G+       +  
Sbjct: 322 KLKATEVAKAMALEGMQMMGGYGYSTEFTMVQHVRMALGATIYGGTNEIQREIIGR 377


>gi|197286484|ref|YP_002152356.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis HI4320]
 gi|227357557|ref|ZP_03841910.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis ATCC 29906]
 gi|29427813|sp|Q8GB20|CAIA_PROSL RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699669|sp|B4EY23|CAIA_PROMH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|27528359|emb|CAD48579.1| crotonobetainyl-CoA reductase [Proteus sp. LE138]
 gi|194683971|emb|CAR45233.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis HI4320]
 gi|227162267|gb|EEI47271.1| crotonobetainyl-CoA dehydrogenase [Proteus mirabilis ATCC 29906]
          Length = 380

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 131/365 (35%), Gaps = 18/365 (4%)

Query: 101 PAWHALLRRS--IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            A+ A   R     +    ++ D   + ++  + H    A    +A +     M      
Sbjct: 26  EAYFAQCDRESKYPERFVKALADMEIDNLLIPEEHGGLNAGFVTVAAI----WMELGRLG 81

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A    L   P        +  ++E      A            +TE   G+D+ ++ +  
Sbjct: 82  APTYVLYQLPGGFNTVL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTY 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + +  +Y      +  SS  +   +++++        +      D S  G+   +L+ K
Sbjct: 141 TRKNGKVYLNGSKCFITSSAYTPYIVVMSRDAASPDKPIFTEWFVDMSKPGIKVTKLE-K 199

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R ++  E+ F N       + G        V++         A+ +      +  +A
Sbjct: 200 LGLRMDSCCEITFDNVELEEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  +    +++   A +A+ + +   + +  A   D     S +AA    
Sbjct: 260 ARYANQRVQFGETIGRFQLIQEKFAHMAIKLNSMRNMLYETAWKSDNGLITSGDAAM--- 316

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KY+C   A  V+  AM+ +GG G   E  IAR +R+   + +  GS    +L + 
Sbjct: 317 ----CKYFCANAAFEVVDSAMQVLGGVGIAGEHRIARFWRDLRVDRVSGGSDEMQILTLG 372

Query: 456 NLLEK 460
             + K
Sbjct: 373 RAVLK 377


>gi|332083187|gb|EGI88418.1| protein aidB domain protein [Shigella boydii 5216-82]
          Length = 259

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +   D A+ S + MR + + AI++A +RHV G  LI QP+M+  ++ +AL +   TAL F
Sbjct: 1   MTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLF 60

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           RLA ++D  ++ ++EA +AR+  P  K+  CK     +AEAME +GG GY EE  + R Y
Sbjct: 61  RLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLY 119

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
           RE P NSI  GSGN M LDVL +L K   +++ L     +  G        + R    L 
Sbjct: 120 REMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLR 179

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539
           K  + L R +T ++ L    A + +     +A  + +        
Sbjct: 180 KPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGG 224


>gi|220913502|ref|YP_002488811.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219860380|gb|ACL40722.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 396

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 120/375 (32%), Gaps = 39/375 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           RW +    P    L       G+     +    P      + + A  L          + 
Sbjct: 45  RWYEDGVFPV--ELAPELGELGVLGMHLEGYGCPGRTAVEYGLAAMELEAGDSGIRTFVS 102

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                + + +    +    ++W P++ + E             V     LTE   G+D +
Sbjct: 103 VQGSLAMTAIHTWGSEEQKQEWLPRMAAGE-------------VIGCFALTEPTAGSDPS 149

Query: 213 AITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ +   +   G           +W   + ++   ++ A  +  V  FLVP         
Sbjct: 150 SMATTATRDGSGDNAGWVLNGAKRWIGLASVAGVIVVWAMTDDGVRGFLVPA-----GTP 204

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G+    +  K+  R++   ++ F       LG   +  G          L+ A   ++  
Sbjct: 205 GVTATPIGQKLSMRASIQCDIAFDGVR---LGPEALLPGAFGLRGPFTCLNEARYGIAWG 261

Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  A      A+ Y++ R   G  L    + +  + ++ ++I   T L+  L    D  
Sbjct: 262 AMGAARDSYEAALAYSQDRLQFGKPLAGYQLTQEKLVNMLVEIQKGTLLALHLGRLKDAG 321

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
             R E+         + K    + A  +  EA   +GG+G   +    RH     +    
Sbjct: 322 TIRPEQ-------ISLGKLNNVREAIKIAREARTILGGNGITLDYPPLRHAANLESVRTY 374

Query: 444 LGSGNAMVLDVLNLL 458
            G+     L +   +
Sbjct: 375 EGTDEVHTLILGQHI 389


>gi|295396362|ref|ZP_06806528.1| glutaryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970802|gb|EFG46711.1| glutaryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 418

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 115/370 (31%), Gaps = 31/370 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L +     G+     +           + +    L  +       +      +   + 
Sbjct: 73  RELAKELGQLGVLGMHLEGYGCAGSSATQYGLACRELEAVDSGLRSLVSVQGSLAMFAIH 132

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +     +W P++   E                  GLTE   G+D + + +  ++  D
Sbjct: 133 HWGSEEQKNEWLPRMAQGE-------------AIGCFGLTEPDVGSDPSNMRTVAKRDGD 179

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                    W  +SP++D  ++ A+ +     G  ++   +      G+   +++ K+  
Sbjct: 180 DWVLNGAKMWITNSPVADVAVVWAKTDEEDDKGRPVIRGFVVPTDTPGVECPKVQRKLSL 239

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAI 336
           R++ T E+   N        +  + G       L  L  A   +        R +L +A+
Sbjct: 240 RASITGEIVLDNVRLPADAMMPKAKGLR---GPLTCLSEARFGIVFGATGAARDALEQAL 296

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R      L    + ++ +A      +  T L+  L    D    R E+ +  +++
Sbjct: 297 MYTGSRIQFDKPLAAFQITQQKLAKAFGQYSQITLLAAHLGKLKDTTGVRPEQISLGKMV 356

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                      A  +  +     GGSG   E S  RH           G+     L +  
Sbjct: 357 TA-------DTAMNICRDLRALFGGSGITSEYSPLRHAINLETVLTYEGTHEVHQLTLGR 409

Query: 457 LLEKGTNLFE 466
            L  G N F 
Sbjct: 410 SLT-GINAFA 418


>gi|327283886|ref|XP_003226671.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like [Anolis
           carolinensis]
          Length = 371

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 113/326 (34%), Gaps = 27/326 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+ E  P     +RR+   G                +              +  
Sbjct: 57  PHMAEWDEKEIFPV--ETIRRAAQLGFGGIYVRPDVGGSGLSRLDTSIIFEALSTGCVST 114

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +S     A MV +       + + P + S E                   LTE   G
Sbjct: 115 TAYLSIHNMCAWMVDVFGKEEQRQRFCPSLCSME-------------KLASYCLTEPGSG 161

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D A++ +  ++  D  Y L+G K F+S    +D ++++ +  G  G   +  L+ +   
Sbjct: 162 SDAASLLTSAKRDGDN-YILNGSKAFISGGGDTDLYVVMCRT-GGPGPKGISCLVLEKGT 219

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK--ILIYLDSAIMS 324
            GL + + + K+G  S  T  + F +    +   L     G    MK      ++ A  S
Sbjct: 220 PGLSFGKKERKVGWNSQPTRAVVFEDCAVPVANRLGEEGQGFNIAMKGLNGGRINIASCS 279

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S+  A  + + R   G +L +   ++  +A++A  + AA  +    A +     
Sbjct: 280 LGAAHASILLARDHLKVRKQFGDLLANYQYLQFQLAEMATRLVAARLMVRNAARAL---- 335

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPA 410
              EE   A  +  + K +      A
Sbjct: 336 --QEEREDAVALCSMAKLFATDECFA 359


>gi|300788311|ref|YP_003768602.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299797825|gb|ADJ48200.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 388

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 138/419 (32%), Gaps = 50/419 (11%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
           AL  + P      L  L  ++ S    ELA +AN++             W +  F    H
Sbjct: 8   ALADDLPDEDRDLLTRLRGFLDS----ELAPVANWH-------------WARERFP---H 47

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+       +    +     P             L       A      +  +   + L
Sbjct: 48  HLVEPLGKLDVGGLSYTGYGLPGRTSLLDGFVTLDLARTDPSFATFFGVHTGLAMGSIYL 107

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISD 223
             +      W P             PM +       GLTE   G+  +  + +  ++  D
Sbjct: 108 CGSEEQKAKWLP-------------PMHRFEKIGAFGLTEPDVGSAASRGLKTTARREGD 154

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                   KW  ++  +D  ++ A+   +G+V  FL+     +    G    +++ KI  
Sbjct: 155 EWVLNGEKKWIGNATFADVVVVWAKDVEDGQVKGFLL-----EQGTPGFTPTKIEGKIAL 209

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYA 339
           RS     +   +        L  +    +   +  +     A  +V     +   A+ YA
Sbjct: 210 RSVQNAHILLEDCRVPEANRLQHANTFADTAAVLRMTRTSVAWQAVGCSIGAYQRALAYA 269

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +    +++  +  +  +I A+  L  +L+   D  K   E+A+ A      
Sbjct: 270 KEREQFGRPIGGFQLVQDLLVKMLGNITASLCLVAQLSRLQDAQKMTEEQASLA------ 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +C       +  A E +GG+G + E  + R   ++ A     G+     L V   L
Sbjct: 324 -KAFCTTKMRETVGMARELMGGNGILLEFDVGRFVADAEAIHSYEGTREMNTLIVGRAL 381


>gi|114675645|ref|XP_001170163.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase isoform 1 [Pan
           troglodytes]
          Length = 405

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 34/334 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 89  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 135

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 136 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 195

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 196 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 248

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 249 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 308

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 309 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 361

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +E  + RH     A +   G+ +   L +   +
Sbjct: 362 SDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 395


>gi|284043797|ref|YP_003394137.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283948018|gb|ADB50762.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 391

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/382 (18%), Positives = 132/382 (34%), Gaps = 24/382 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+    P  H   +     GL   +   +           + A      A    
Sbjct: 30  PRAADVDRDARFP--HESYQALARAGLAGLLVPPALGGSGGSVLGYVVAMEEIAAACPAT 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +    + +A+ + +  +    + W P +                S    L ++E   G
Sbjct: 88  ATVYMTQMHAANPILMAGSDEQRRRWLPLLCDG-------------SAYGSLAVSEPEAG 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +D+AA+ +  ++  +  Y L G K F+++   +D  ++ A V+   G   +   L +   
Sbjct: 135 SDVAALRTFARRDGEDGYVLDGAKTFITTGDRADVVVLFATVDRTAGRDGITAFLIERGT 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKILI--YLDSAIMS 324
            GL      +K+G R ++TVEL        +   L    G     M+ ++   L +A   
Sbjct: 195 PGLVAGPAMHKLGMRGSSTVELFLDGVRAPVAARLGSERGGWALSMRSVVKSRLSAAAQG 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R +   A  +A  R +  G        + A+A+    IAA  AL  + A   D A 
Sbjct: 255 VGIARGAYEHARTWAHERGLLRGSRGVAQDAQFALAEADARIAAMRALLQQTAALVDRA- 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
               + A         K  C   A A+  E ++ +G  G  E   + R+ R++    I  
Sbjct: 314 ----DGAEPVAQVSAAKLVCTDGAMAICDELVDLLGPDGDDERHGVERYLRDAKVTQIYD 369

Query: 445 GSGNAMVLDVLNLLEKGTNLFE 466
           G+     L +   +        
Sbjct: 370 GTNQIQRLLIARDVRADAEAAA 391


>gi|295396580|ref|ZP_06806737.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970595|gb|EFG46513.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 627

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 90/517 (17%), Positives = 164/517 (31%), Gaps = 78/517 (15%)

Query: 78  NYNTPQLHAYGPGGERWD---KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            +  P          R +   KVE        L       L  +  D             
Sbjct: 52  EHFEPHFQKLDANEPRINADGKVELIDDVKLALDAFSAADLMSAAMDEKVGGFQLPMTVA 111

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 +  A          +  +A  +    +  +   + P + S  +           
Sbjct: 112 RAVYMWFQAANASTYAYAGLTTAAAQTLYQHGSQELIDRFVPHMASGRFFGV-------- 163

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + L+E   G+ +  +T++G+   DG Y L G K ++S    +       ++LA+ 
Sbjct: 164 -----MALSEPEVGSSLGDLTTRGEPQPDGTYRLFGTKMWISGGDQEISENIVALVLARH 218

Query: 250 EGR--------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
            G         +  F VP+ + D     G  N +    L +K+GNR      LEF +   
Sbjct: 219 AGENAQPGPKGLSLFAVPKFITDDNGDLGERNAITLVGLNHKMGNRGTTNTLLEFGDDKH 278

Query: 294 ------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
                         G+L+G        +  M     +     + S  + S   A+ YA  
Sbjct: 279 RPVNAQGEPTSGAVGYLIGREGEGLALMFHMMNEARVFVGAAAASVGQRSHLTAVRYAGE 338

Query: 342 RHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------ 383
           R   G              +++   ++R +         + AL    +   DEA      
Sbjct: 339 RRQ-GRLPQDKGHGGPMVPIVEHADVRRMLLASKSYAEVSVALVMFCSRLQDEAQTAERE 397

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R   A    ++ PI K +  + A      A++  GG GY  + ++ + YR++  N I 
Sbjct: 398 EDREAAALLLDVLTPIAKSFPSQYALKASDLAIQVHGGYGYTRDFTVEQLYRDNRLNPIH 457

Query: 444 LGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501
            G+      D+L   +  +G    + L   + Q   ++G          +   K    + 
Sbjct: 458 EGTHGIQANDLLGRKVAMRGGAGLDLLVRRIAQTCEAAGAGAGAGADTQVWAAKLRDAVE 517

Query: 502 RFLT--------EKIALASSAAALYRAGMNDIADVFL 530
           R +         +    A   AALY   M  I   +L
Sbjct: 518 RAVQVTRKVHGRDNANAALKDAALYLEAMGHIVAAWL 554


>gi|67538200|ref|XP_662874.1| hypothetical protein AN5270.2 [Aspergillus nidulans FGSC A4]
 gi|40743240|gb|EAA62430.1| hypothetical protein AN5270.2 [Aspergillus nidulans FGSC A4]
 gi|259485298|tpe|CBF82203.1| TPA: acyl-CoA dehydrogenase (AFU_orthologue; AFUA_2G16630)
           [Aspergillus nidulans FGSC A4]
          Length = 425

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 129/362 (35%), Gaps = 29/362 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD   + +V  +  +     +          L   +      V          
Sbjct: 87  AGIKAEEWDGFHDLIVIDEIARCGYLGV-------IWALGCGNSIGGPPVINFGNEEQKN 139

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            + P + S                   LG+TE   G+D+A IT+  ++  D        K
Sbjct: 140 RFLPDMLSG-------------KTRFCLGVTEPDAGSDVAGITTTAERRGDKYIVNGAKK 186

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   V  L+   + +G+  +++ N  G  ++ +  +EF 
Sbjct: 187 W-ITNGIFADYCTAAVRTGGEGIAGVSALVIPLNASGVTRRKIDNS-GVLASGSTYIEFD 244

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       LLG+ N     + +      L  A  S+   RV   +A  +A  R   G  L
Sbjct: 245 DVEVPVSNLLGEENKGFPIIMNNFNHERLWLACTSLRMARVCAEDAYRHAITRETFGKKL 304

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I+  V++   A +   + +A A   +L    + AK+   +AA   + A + K    +   
Sbjct: 305 IENQVIRAKFAAMGRSLDSAYAWMEQLVYMAETAKANHTDAAMGGLFANL-KVLAGRTLE 363

Query: 410 AVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            V  EA + +GG GY        I +  R+     +  GS   +    +N   +      
Sbjct: 364 MVNREAQQVLGGLGYSKNGRGARIEQISRDVRVMVVGGGSEEILSELAVNQEIRAMGKLS 423

Query: 467 QL 468
           +L
Sbjct: 424 KL 425


>gi|242238846|ref|YP_002987027.1| acyl-CoA dehydrogenase [Dickeya dadantii Ech703]
 gi|242130903|gb|ACS85205.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 381

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 14/272 (5%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEG 251
              A  L  TE + G+D   I +   +  +G   L+G K F++        ++LA+  E 
Sbjct: 115 GVPAYSLAFTEPQAGSDNNRIATTYTRK-NGKVYLNGQKTFITGAKDLPYMLVLARNPEP 173

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVE 310
                       D +  G+    L +K+G    +  E+   N        +     G + 
Sbjct: 174 EDPKRCFTLWWLDPNSPGVKRNDL-HKVGWHMISNCEVFLDNVEVSEEDRVGREGWGFIH 232

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
            M+      L  A  S+     +  +A  YA +R      +    + +  +  +A+ I  
Sbjct: 233 MMENFDIERLVIAAHSLGVAECAFEDAARYANQRVQFDKTIGQFQLTQLKLTQMAIKIQN 292

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                +R+A   D+     +        AP+ K +C + A  V+ +AM+ +GG GY  + 
Sbjct: 293 MKNFVYRVAWECDQGLPMRQ-------SAPMCKLYCAQSACEVVDDAMQILGGLGYTNDS 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            I+R +R+   N I  G+   MV      + K
Sbjct: 346 RISRFWRDVRVNRIGGGTDEIMVYISARQILK 377


>gi|169631683|ref|YP_001705332.1| putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC
           19977]
 gi|169243650|emb|CAM64678.1| Putative acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 393

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 106/332 (31%), Gaps = 33/332 (9%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ +    L          +      +   +    +    + W P++ + E         
Sbjct: 83  AYGLACMELEAGDSGIRSLVSVQGSLAMYAIYAYGSDAQKQKWLPRMATGE--------- 133

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                    GLTE   G++   + +  ++            W  +  ++D  ++ AQ + 
Sbjct: 134 ----ELGCFGLTEPDFGSNPGGMRTHARRDGSDWVLNGTKMWITNGSIADVAVIWAQTDE 189

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
            V  FLV          G   Q + +K+  R++ T EL   + +      L ++ G    
Sbjct: 190 GVRGFLVST-----DSAGFDAQTIHSKMSLRASVTAELNLVDVWVPEKNRLPLAVGLKA- 243

Query: 312 MKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              L  L+ A   +        R  L  A+ YA+ R      +    + +  +A++AL+ 
Sbjct: 244 --PLSCLNEARFGIIFGSMGAARECLRTALEYAQTREQFDRPIAGFQLTQEKLANMALEY 301

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L+  L    D           A     + K    + A  +   A   +G +G   
Sbjct: 302 GKGVLLALHLGRRKD-------ADTLATPQVSLGKLNNVREAIEIARTARTILGANGISG 354

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + RH     +     G+     L +   L
Sbjct: 355 EYPVMRHANNLESVLTYEGTSEMHTLVIGQAL 386


>gi|94495191|ref|ZP_01301772.1| putative acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425457|gb|EAT10477.1| putative acyl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 387

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 118/346 (34%), Gaps = 28/346 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMV 162
           +AL  +    G         ++ +      ++  AR +   A          S   A  +
Sbjct: 41  YALWDKIAEQGFFGIGIPEEYDGLGGDVMMQMIFAREFARTAGGLLWVWGLTSFGGAKTI 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKI 221
             + T      W               PM +  + + L +TE  GGTD+  A+ +  +K+
Sbjct: 101 GAVGTEEQKNRWL-------------RPMAQGKLRVSLSMTEPDGGTDVLGAMKTHAEKV 147

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             G        W   +  +D  ++LA+ +         +     D    G+    L  K+
Sbjct: 148 DGGWKMNGAKMWTTGAKAADRLLVLARTDKNAEKKHHGLTMFFVDAKSPGITAS-LLPKL 206

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAI 336
           G R+  + E+ + + F      L         M        +      +  +   L +A+
Sbjct: 207 GMRAMGSCEVHYEDVFVPDEDVLGEPGQAWYAMLPTLNNERIMVGAQCLGAIDGVLEDAL 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   GGI+    +++  +ADIA        L + +A           EA   +++
Sbjct: 267 EYMLQRKAFGGIIGRFQILQHYVADIATWQKLTELLLYNVAWMQSNGMPCGTEANMLKMV 326

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A        + A       ++ +GG GY  E  + R++R+     +
Sbjct: 327 A-------TENAVKAADLGIQILGGMGYSAETDMQRYWRDHRILRM 365


>gi|120404297|ref|YP_954126.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957115|gb|ABM14120.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 414

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 111/314 (35%), Gaps = 35/314 (11%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + +                     +TE   G+D    + S  
Sbjct: 117 PTIMSRGTLAQQERWLPDLVTY-------------DKIGAWAITEPDSGSDAFGGMKSYV 163

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCY 272
            +  D  Y L+G K F+++   +D  ++ A+++            V   + D   +G   
Sbjct: 164 TRDGDD-YILNGQKTFITNGPDADVVVVYAKLDEGDPSIDKRDRKVLTFVLDKGMDGFVQ 222

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAIMS 324
            +   K+G  S+ T EL F++        L                       +  A MS
Sbjct: 223 SKPFRKMGIHSSRTGELFFNDVRLGRDRLLGETEDNSGGDGRDSARSNFSAERIGVAAMS 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   L   + YA+ R + G  +    +++  +A + +       + FR+  +     
Sbjct: 283 LGVIEECLRLCVDYAKSRTLWGKEIAQFQLIQLKLATMEVARMNVRNMLFRVIEAAQTGT 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S         A   K++C + A  V  EA++  GG+GY+ E  + +  R++ +  I  
Sbjct: 343 PISLA------EASAIKWYCSQAATDVAMEAVQVFGGNGYMTEYRVEQLARDAKSLMIYA 396

Query: 445 GSGNAMVLDVLNLL 458
           GS    +  V   L
Sbjct: 397 GSNEVQITHVARGL 410


>gi|222479919|ref|YP_002566156.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452821|gb|ACM57086.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 382

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 138/400 (34%), Gaps = 39/400 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
              +   A+E A    Y  P   AY      +D  E+      +L   +  GL       
Sbjct: 13  ARDVKREAREFAD--EYIAPNAEAY------YDSGEYP---WEVLEAGMDAGLIAQDIGE 61

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +       A  +  A  +  A       +  +     MV    T    +++        
Sbjct: 62  EYGGKGFDLAQVLAIAEEFYRADAGIALTLQLASFGCEMVEQYGTDEQKEEYL------- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                  P+ +     GL ++E   G+D+A +T++ +K+  G        W  ++  +D 
Sbjct: 115 ------RPVAENDQISGLAVSEPETGSDLAGMTTKAEKVDGGYELTGEKYWVGNAVEADW 168

Query: 243 FIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301
             + A+  +           + +   +G   + +  K+G R++    + F + F      
Sbjct: 169 LTVYAKTGDSEDRYSNYTLFIVETDSDGYEAEHIPEKMGMRASKQGHIVFEDCFVPEENV 228

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356
           +    G    +    + +   + V G  + LA A       +   R+  G  + +   ++
Sbjct: 229 VGSEGGGFYVL--ADFFNHGRVIVGGHGLGLAAAAIEEAEEFVHGRNAFGRTVNEFQAVQ 286

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             ++D+ +   +A AL++R      +  +       A   A + K    ++A     + M
Sbjct: 287 HTLSDMRIGFESARALNWRACEKVADNDN-------AGYWAALAKTKSTEVATDCAEKGM 339

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +  GG   + +R IAR YR+     I  G+ +     +  
Sbjct: 340 KLHGGRSILTDRRIARVYRDVRIPVIYEGANDIQRNLIYR 379


>gi|218290800|ref|ZP_03494877.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239235|gb|EED06435.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 383

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 123/367 (33%), Gaps = 26/367 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WD+    P    L R     GL       S+            AA         A + +
Sbjct: 30  NWDRTGAFP--RDLWRAMGRLGLTGLRVSPSYGGSGADCLTTGIAAEEVARGDFNAAYAV 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +   A ++    +  + ++W              APM      + + +TE   G+D+A
Sbjct: 88  MLNALLAEVLEAHASEDLKREWL-------------APMAAGERLMAIAITEPGAGSDVA 134

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            I ++ ++  D             + ++DAF++ A+ +   G   V   L      G+  
Sbjct: 135 QIAARAERDGDRYVITGEKSGISLASVADAFVVFAKTQVDAGARGVSAFLVPREAPGVEV 194

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R ++ +G+ +     +        +   +G+ N +   +     L  +   +  +    
Sbjct: 195 HRYED-MGHVAIGRGSVFLERVEVPIEYRIGEENRAFYQLMKGFDLSRVLICLQCLGAAM 253

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            SL E   + RRR   G  L     +   + +    I      S+R     D     ++E
Sbjct: 254 QSLDETADHVRRRRAFGRPLAQFQGVAFPLVEYHTQIEMIRWFSYRALWLRDRGLPHTKE 313

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A+  + + P       ++A   I E +   G  GY ++  + +  R+     I  G+   
Sbjct: 314 ASMCKWLGP-------QVAAQAIHECILLHGHYGYTKDLPLEQRLRDVIGLEIGDGTAQT 366

Query: 450 MVLDVLN 456
             + +  
Sbjct: 367 QKIVIAR 373


>gi|121607491|ref|YP_995298.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552131|gb|ABM56280.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 411

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 131/389 (33%), Gaps = 32/389 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
              ++ D+ +   A    +RR    G        +    +     +        +A    
Sbjct: 37  AAAQQVDETDDRAACRDWVRRLGAGGWLRYCVPAAHGGALPALDSRALVLLRETLAYHSP 96

Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            A    +     +  + L   P     + P + S               +     L+E  
Sbjct: 97  LADFACAMQGLGSGAITLAGNPAQQARYLPGVASG-------------RLIAAFALSEPE 143

Query: 207 GGTDIAAITSQGQ--------KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
            G+D+AA+ +  +           D         W  +  ++D + + A+ +   G   +
Sbjct: 144 AGSDVAAMQTMARSAEETNPGDRPDSYSLAGSKTWISNGGLADFYCVFAKTDPTAGTRGI 203

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              + D    GL   +  + +     AT  L F++       LLG L+           +
Sbjct: 204 SAFIVDADTPGLDATQHLHVMAPHPLAT--LRFADCRLPASALLGPLHGGFKLALRTLDI 261

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++   R +LAEA+ +AR+R + G  L D  + +  + ++A  + +A  L++R
Sbjct: 262 FRASVAAAALGMARRALAEAVQHARQRRMFGQTLADFQLTQARLGEMAALVDSAALLTYR 321

Query: 376 LANSFDEAKSRSEEAAYARIMAPI----TKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            A   DE +      A       +     K    + A  VI  A++  GG G      + 
Sbjct: 322 AAWLRDEGEKHQRSVAAELRERSVAAAMAKMTATENAQRVIDMALQLHGGRGVERGSKVE 381

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460
             YR+  A  I  G+     L +   + +
Sbjct: 382 ALYRDIRALRIYEGATEVQQLIIGKAVLQ 410


>gi|324517015|gb|ADY46704.1| Acyl coa dehydrogenase 6 [Ascaris suum]
          Length = 396

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 59/381 (15%), Positives = 139/381 (36%), Gaps = 27/381 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--L 142
               P  + W+K    PA  +L ++    G+       ++  +    ++ I  A     +
Sbjct: 35  KEINPHVDEWEKNRRFPA-KSLFKKLGRLGILGVNKPHAYGGLGLDFSYNIAIAEEMGRV 93

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                   +   +  +   +A   +  + +++               P  +  +   +G+
Sbjct: 94  HCAAIPMAIAVQTDMATPALADFGSDALKREFL-------------RPTIEGDMVSCIGV 140

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRL 261
           +E   G+D+AAI ++       +      +W  +   +D   +L    + ++       +
Sbjct: 141 SEAYAGSDVAAIRTRAHWHGSDMIINGSKQWITNGNQADWICLLVNTNDNQLLHRNKSLI 200

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYL 318
                  G+   +   K+G  S+ T E+ F +        +     G V  M       L
Sbjct: 201 CVRLDEPGVHRSKSIEKLGMHSSDTAEIYFDSVRVPSRNIIGEEGRGFVYQMLQFQDERL 260

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +  + +  M+  +   I Y R+R + G  ++D  V+   +A++  +I A  +L +R   
Sbjct: 261 VAIAVLLEPMQRIIDMTIDYTRQRRIFGKSVLDNQVVHYRLAELQTEIEAVRSLLYRAVM 320

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                           ++A + K    ++A  +    ++  GG+GY  + +I+R++R+  
Sbjct: 321 ERLSGTD-------VTLLASMGKLKAGRLARTITDSCLQFWGGNGYTWDNAISRYHRDFR 373

Query: 439 ANSILLGSGNAMVLDVLNLLE 459
             SI  G    M+  +   + 
Sbjct: 374 LFSIAAGCDEVMLNIICKYMR 394


>gi|226225846|ref|YP_002759952.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226089037|dbj|BAH37482.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 620

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 139/396 (35%), Gaps = 36/396 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R+D+ EF     A+++     GL      +++  +    +   R            G L
Sbjct: 62  QRFDEQEFIDE--AVIQAFAECGLLAISIPKAYGGLGLSASAYARVFGAVAAIDASLGVL 119

Query: 152 MSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +          V +       + + P +   E                   LTE   G+D
Sbjct: 120 IGVHCGLGSKAVVIAGNEAQKQRYLPMLARGE-------------TLAAYALTEPETGSD 166

Query: 211 IAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLV---PRLLEDG 265
              I S+ ++  DG  + L+G K ++ +      I   AQ        +V      +   
Sbjct: 167 AQHIVSRTERSPDGTGWILNGRKHWIGNGQRAGVIATFAQTPIERDGKIVHRPTAFIIRP 226

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G       +K+G R +   EL + N F     +LG++        +      L  A 
Sbjct: 227 DMPGFRVDGTIHKLGIRGSTQAELVYENLFVPDDHVLGEVGKGFRVAVNALNGGRLSLAS 286

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V G +  L E   YA  R   GG L +  + +R +A IA +  AA ++   LA + D 
Sbjct: 287 GCVQGSKRLLGEFTRYAEARTQFGGPLANFEITQRKMATIASETYAAESMVGALAAAMD- 345

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +     + A   K +   +      E ++  GG G+++     R+ R++  N I
Sbjct: 346 -----GDVVDVALEAACAKVYASDLVWRTADELVQLAGGRGFVKPWPYERYLRDTRINRI 400

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
             G+   + L V      G N  +     L++  G+
Sbjct: 401 FEGANEILRLFV------GLNGIQGPAEELKEIAGA 430


>gi|41408994|ref|NP_961830.1| FadE21 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397353|gb|AAS05213.1| FadE21 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 418

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 118/317 (37%), Gaps = 36/317 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +A   T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 118 AATIASRGTLAQKERWLPELMTLE-------------KIAAWAITEPDSGSDAFGGMKTS 164

Query: 218 GQK--ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNG 269
            ++    DG Y L+G K F+++   +D  ++ A+++            V   + D    G
Sbjct: 165 VRRSGDGDGAYILNGQKTFITNGPYADVLVVYAKLDEGDPSVDKRNRPVLVFVLDAGMPG 224

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVS 326
           L   +   K+G  S+ T EL F N        L  S    E   +     + A   + ++
Sbjct: 225 LTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGESEQHTEGDGRDSARANFAAERIGIA 284

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + + +      + YA  R + G  +    +++  +A + +       + F       
Sbjct: 285 MMALGIIDECHRLCVDYANSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMVFHTIERQR 344

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  
Sbjct: 345 AGKPLTLAEASAIKL------YSSEAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLM 398

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS    V  +   L
Sbjct: 399 IYAGSNEVQVTHIAKGL 415


>gi|89897048|ref|YP_520535.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
 gi|89336496|dbj|BAE86091.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 383

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 119/289 (41%), Gaps = 17/289 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E      A +Q+  VA  LG TE + G+D +A  +   +  +G   ++GHK F+S  +
Sbjct: 101 SEEQIADTMAVVQRGGVAFVLGFTEPQAGSDSSAAATTYTRR-NGKVYINGHKTFMSGAL 159

Query: 240 SDAFIM-LAQVEGRVGC----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
              +++ LA+     G               + +G+  ++L+ KIG     T E+   + 
Sbjct: 160 RAPYMLCLARNSEEAGHADKRNAFSMWWVPMNASGIKIEKLE-KIGWHMQDTCEVYLEDV 218

Query: 295 FGFLLGDLNV-STGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                  + V   G ++ +    +  L  A   +     +  +A+ YA +R   G  +  
Sbjct: 219 EVEEKDLVGVEGNGFMQVLYNFEMERLLMAASVLGMAECAFEDAVRYANQRVQFGKTIGS 278

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  I  +   I     + ++ A   D            +I + I K +C + A  V
Sbjct: 279 FQLIQEKITFMKAKIENMKNMVYKCAWEVDNGLP-------VQISSAIAKLYCAQAANEV 331

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I +A++ +GG GY ++  I+R + ++    I  G+   M+      + K
Sbjct: 332 IDDALQIMGGIGYTKDARISRLWLDARVFRIGGGTDEIMIHAAGRAILK 380


>gi|311899543|dbj|BAJ31951.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054]
          Length = 392

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 114/371 (30%), Gaps = 34/371 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            W +    P    L       G+     +           + +    L          + 
Sbjct: 44  DWYEAGTFPV-RELAPELGKLGVLGMHLEGYGCTGSTATEYGVACMELEAADSGLRSFVS 102

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                +   +    +      W P++                      GLTE   G+D A
Sbjct: 103 VQGSLAMRSIHAFGSEEQKLRWLPEL-------------AAGQAVGCFGLTEPEAGSDPA 149

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           ++ ++ ++            W  +  +SD  ++ A  E  V  FLVPR        G   
Sbjct: 150 SMRTRARRDGTDWVLDGAKAWITNGSVSDVAVVWAATEEGVRGFLVPR-----GTPGFTA 204

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SG 327
           + +  K+  R++ T EL F          L ++ G       L  L  A   +       
Sbjct: 205 RDIPGKLSLRASVTSELAFDGVRLPAGAMLPLARGLRA---PLSSLGEARYGILWGTVGA 261

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R     A+ YAR R   G  +    + +  + ++AL++  A  ++ R+    DE +++S
Sbjct: 262 ARDCYRTAVQYARDRVQFGRPIGGFQLTQAKLVEMALELEKAYLVAVRIGRLKDEGRAQS 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                        K    + A  +   A   +G +G      + RH     +     G+ 
Sbjct: 322 A-------HISFGKLNNVRTALEIARSARTILGANGITTAYPVLRHANNLESVLTYEGTA 374

Query: 448 NAMVLDVLNLL 458
               L +   +
Sbjct: 375 EIHTLVLGEAI 385


>gi|307726833|ref|YP_003910046.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307587358|gb|ADN60755.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 413

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/326 (20%), Positives = 117/326 (35%), Gaps = 31/326 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   ++     +  ++L  T      + P++                +      L+E   
Sbjct: 100 ADFALAMQGLGSGAISLAGTHEQKAHYLPRV-------------ANGTAIAAFALSEPEA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+AA++   ++  D         W  +  ++D +++ A+     G   +   + D   
Sbjct: 147 GSDVAAMSLTAREDGDAYVLDGEKTWISNGGIADFYVVFARSGEAPGARGISAFVVDADT 206

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVS 326
            GL      + I         L F+         L     P E  KI +  LD    SV+
Sbjct: 207 PGLEIAERIDVIAPH--PLARLRFAGARVPRSQMLG---APGEGFKIAMRTLDIFRTSVA 261

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  A      A+  A  R + G  L D  + +  +A +AL I ++  L +R A   D
Sbjct: 262 AASLGFARHAMAEALARAASRKMFGQTLGDFQLTQARLAQMALTIDSSALLVYRAAWLRD 321

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + +S + EAA A+  A        + A  VI  A++  GG G     ++   YRE  A  
Sbjct: 322 QGESVTREAAMAKWHA-------SEGAQQVIDAAVQLYGGMGVQSGVAVEMLYREIRALR 374

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQ 467
           I  G+     L V   L K       
Sbjct: 375 IYEGATEVQQLIVGRDLLKAHAAANA 400


>gi|302504910|ref|XP_003014676.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371]
 gi|291177982|gb|EFE33773.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371]
          Length = 610

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 23/279 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           +  S E        + +  +    GLTE   G+D  ++ +  +      G Y LSG K W
Sbjct: 143 EFGSEELKQRLLPQLAQGKLLGCFGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTW 202

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFS 292
             +SP+SDAF++ A+++G++  F+V R   D  P G L    +KNK   R++ T  ++  
Sbjct: 203 ITNSPISDAFLVWAKLDGKIRGFVVER---DQCPEGTLRTPAIKNKTALRASITGMIQMD 259

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
           N            TG V        L+SA + ++      +   ++ A  YA  R    G
Sbjct: 260 NCPVPETNMFPEVTGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKG 316

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++A   DE K+  E       M  + K   C 
Sbjct: 317 NPLAKYQLVQKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCD 369

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            A A      E  GG+   +E  I RH           G
Sbjct: 370 RALAGSRTLQEIFGGNAASDEYHIGRHVANLFVTQTYEG 408


>gi|302518153|ref|ZP_07270495.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
 gi|318060019|ref|ZP_07978742.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actG]
 gi|318077639|ref|ZP_07984971.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SA3_actF]
 gi|302427048|gb|EFK98863.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp.
           SPB78]
          Length = 389

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 122/378 (32%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              ER ++    P   AL       G        ++       +  +    ++  +    
Sbjct: 24  RWAERIEETGEVPE--ALWAELNGLGFLRMAAPVAYGGHGLPFSRWMELMEVFSRSHGSI 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++         +    T    K +               P     + I   LTE   G
Sbjct: 82  RMIVHVVNGIWRAMDGHATEEQRKRFVI-------------PSITGEIKIAFTLTEPGNG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           T  A IT+   +  D  Y              D +++ A+VEG  G      LL   +  
Sbjct: 129 TG-ADITTSVVREGDTYYLSGSKHLITFGVRCDYYLLAARVEGSAGHEGTVALLVPRNAP 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMS 324
           G+  +   N +G        L F  T   +   L      ++           +  A+  
Sbjct: 188 GVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLGAEGEGLDVFLGGFLTPSRVSVAMSC 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +   A+ YAR R   G  L  +  ++  +A+ A DI AA  L    A  F+E  
Sbjct: 248 VGLAERAQQLAVAYARDRVTFGKALTQRQAIQFMLAENAADIEAAKQLVLHAARRFEEG- 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A  A + + + K     M   V  +A++  GG GY + + I R YR++ A     
Sbjct: 307 -----AEDASMQSSMAKMHAVTMLTNVTDKALQIHGGLGYWKSQKIERVYRDARAQRFEE 361

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+       V   + + T
Sbjct: 362 GTNEVQKAVVFREVLRRT 379


>gi|169599849|ref|XP_001793347.1| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15]
 gi|160705334|gb|EAT89481.2| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15]
          Length = 416

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 114/314 (36%), Gaps = 36/314 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   +    T  + +   P+             M K  +    GLTE   G+D  ++
Sbjct: 122 SSLAMGGIEEFGTEELKERLLPR-------------MAKGELLGCFGLTEPNHGSDPGSM 168

Query: 215 TSQGQKIS--DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-L 270
            S  +      G Y LSG K W  +SP++D  ++ A+++G++  F++ R   D  P G L
Sbjct: 169 ESTAKPHPTKKGYYSLSGSKTWITNSPIADVLLVWAKLDGKIRGFVIER---DQCPPGTL 225

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               +K+K G R++ T  ++  N             G          L+SA   ++   +
Sbjct: 226 ETPAIKDKNGLRASLTGMIQLDNCPVPEANMFPEIVGLK---GPFSCLNSARYGIAWGTM 282

Query: 331 SLAEAI-----HYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
              E        YA  R    G  +    ++++ +AD   D A     + ++    DE K
Sbjct: 283 GALEDCISRTRQYALDRKQFKGNPIAKYQLVQKKLADATTDAAFGILAAVQVGRLKDEGK 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +       A  M  + K   C  A        E  GG+   +E  I RH           
Sbjct: 343 A-------APEMISMIKRQNCDRALINARTLQEVFGGNAVSDEYGIGRHVANLFVTQTYE 395

Query: 445 GSGNAMVLDVLNLL 458
           G  +   L +   +
Sbjct: 396 GQSDIHALILGRAI 409


>gi|152967448|ref|YP_001363232.1| acyl-CoA dehydrogenase domain protein [Kineococcus radiotolerans
           SRS30216]
 gi|151361965|gb|ABS04968.1| acyl-CoA dehydrogenase domain protein [Kineococcus radiotolerans
           SRS30216]
          Length = 393

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/352 (17%), Positives = 123/352 (34%), Gaps = 29/352 (8%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTP 168
             G    + D    P V + +H         +++ +   A  L   +  +   +A + + 
Sbjct: 59  EYGQLNLVGDALEGPGVPRLSHTAAGLVTMELSRGDGSFATMLGVQAGLAMRSIAFLGSQ 118

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + W P             PM +  V    GLTE   G+D  A+ +  ++  D     
Sbjct: 119 EQKERWLP-------------PMARLEVLGAFGLTEPDHGSDAVALATTARREGDEYVLD 165

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W     + D  ++ A+ E       V   L +    G   + ++ K   R+    +
Sbjct: 166 GAKRWIGFGTVCDVCVVWARGEDGQ----VQGFLVERGTPGFEARVIEGKASLRAIHNAD 221

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           +  +         L  +    +  ++L       A  ++     +   A+ Y+  R   G
Sbjct: 222 ITLTGVRVPAANRLPGANSFRDTGRVLSATRAGIAWGALGHATAAYETALAYSLERKQFG 281

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    +++  +  +  ++ A      R+    DE +    +A+ A       K    +
Sbjct: 282 QPLASFQLVQDKLVQMLAEVTAMQLFCVRVGKLADEGRLTDTQASLA-------KVNSTR 334

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A AV A A + +GG+G + E  +ARH  +  A     G+ +   L V   L
Sbjct: 335 KARAVTAMARDLLGGNGILLEHRVARHMADVEALHTYEGTESIQTLIVGRHL 386


>gi|116693605|ref|YP_839138.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|116651605|gb|ABK12245.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 384

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 100/271 (36%), Gaps = 13/271 (4%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
           P  + +    + ++E   G+D  A+++   +  DG        W   +  +D  I++A  
Sbjct: 120 PYARGATRAAMAISEPGAGSDPGALSTTAVRDGDGWVLNGRKIWISHAAEADWTIVMALT 179

Query: 250 EGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
           +   G    +   + D    G   +R    IG    +T E+   +       LLG     
Sbjct: 180 DRSKGKRGGMSAFIVDRDTPGFVIERRIPMIG--GLSTYEIALEDCRIPGAQLLGREGAG 237

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             P++       L+ A   +     ++A    +A++R   G  L ++  ++  +AD    
Sbjct: 238 FAPMQSRLANRRLEMAAWCIGRAERAVALLCDHAKQRTTFGVPLAERQAVQWWVADALTQ 297

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           I A   +++  A   D  +        AR    + K +  +MA  VI  AM+ +G  G  
Sbjct: 298 IHACRLMTYEAAARVDAGQD-------ARTQISMVKVFATEMASTVIDHAMQTLGAMGMT 350

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +E  + +   E+    I  G        V  
Sbjct: 351 KEMPLQQMASEARLMRIFEGPTEVHRWVVAR 381


>gi|319951133|ref|ZP_08024980.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319435194|gb|EFV90467.1| putative acyl-CoA dehydrogenase [Dietzia cinnamea P4]
          Length = 421

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 121/346 (34%), Gaps = 35/346 (10%)

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            R     +  + L          L       A+ +A   T    + W P I + E     
Sbjct: 93  GRDSMMAVVISELAGACMGLVSALGVSLGLGATTIASRGTLVQKERWLPGIMTME----- 147

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIM 245
                         +TE   G+D    + +  ++  D  Y L+G K F+++   +D  I+
Sbjct: 148 --------KVASWAITEPDSGSDAFGGMRTYVRRDGDD-YILNGRKTFITNGPYADVMIV 198

Query: 246 LAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297
            A+++            V   + D   +GL       K+G  S+ T EL F +       
Sbjct: 199 YAKLDEGDPAVGPRDRKVLTFVLDKGMDGLTQGPPFKKMGLHSSPTGELFFDDVRLGRDR 258

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352
           LLG      G            +  + V+ M + + E      I Y+R R + G  +   
Sbjct: 259 LLGGSETGRGGDGKESARSSFTAERIGVATMALGIIEECRRLCIEYSRERTLWGQEIGRF 318

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  +A + +       + F         K  S   A A  +      +  + A  V 
Sbjct: 319 QLIQLKLAKMEVARMNVQNMVFTSIERARAGKPLSLAEASAMKL------YSSEAATEVA 372

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            EA++  GG+GY+ E  + +  R++ +  I  GS    V  +   L
Sbjct: 373 MEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEIQVTHIAKGL 418


>gi|194374041|dbj|BAG62333.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 128/383 (33%), Gaps = 47/383 (12%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   + DK    PA  A +++    GL                     A           
Sbjct: 55  PIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAST 112

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSRE----YDPTNKAPMQKTSVAIGLGLT 203
           G +MS + +      L   +    + W     S +    +  +   P           L 
Sbjct: 113 GVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGPSLLGPTGPIFALG 172

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           +       +A  ++                  + P S   +        +    +   L 
Sbjct: 173 QVGCPCPSSA-ATEA----------------CTFPRSRQRV----SRPELPREGISAFLV 211

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAI 322
                GL   + ++K+G R ++T  L F +          +   P    KI +  LD   
Sbjct: 212 PMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDS---ILGEPGMGFKIAMQTLDMGR 268

Query: 323 MSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + ++   + +A+     A+ YA  R   G  L    V++  +AD+AL + +A  L++R A
Sbjct: 269 IGIASQALGIAQTALDCAVSYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAA 328

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D  K   +EAA A              A A+  +A++ +GG GY+ E    RHYR++
Sbjct: 329 MLKDNKKPFIKEAAMAASE----------AATAISHQAIQILGGMGYVTEMPAERHYRDA 378

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
               I  G+     L +   L +
Sbjct: 379 RITEIYEGTSEIQRLVIAGHLLR 401


>gi|70607943|ref|YP_256813.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
 gi|68568591|gb|AAY81520.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639]
          Length = 374

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 20/291 (6%)

Query: 177 KIFSRE-YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           ++F+ E        P+ +  +     LTE  GG+D+ ++ +  ++ +          W  
Sbjct: 88  RLFANESQKKQFLDPISRGKMIGSFALTEPTGGSDVGSMKTYAERRNGEWVISGRKMWIT 147

Query: 236 SSPMSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
               +D FI +A+     G +  FL+PR       N +  ++++  +GNR   T E+ F 
Sbjct: 148 QGIYADLFITVARTGSRRGELSVFLLPR------SNCIESRKIE-VMGNRGTGTSEVVFR 200

Query: 293 NTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                   ++G++N     V  +  +  L  + +S+     +L EA+ +A  R   G  L
Sbjct: 201 ECKADESQVVGEINRGWDMVNTVLEVGRLAISGISIGLAESALQEALSWALNREAFGSKL 260

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
                +K  IAD    + +  +    ++  F+E  +         + A + K    ++A 
Sbjct: 261 YSFQGIKWYIADSITKLTSVKSFMKEVSKKFEENSNTK------GVYASMLKLLSGEVAN 314

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  +++  GG GY +   I R YR+     I  G+       +   +EK
Sbjct: 315 QVVDLSLQIFGGMGYAKGTKIERIYRDVRLMRIGEGTDEVQRHIISKYVEK 365


>gi|294941816|ref|XP_002783254.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239895669|gb|EER15050.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 436

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 41/396 (10%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---------RKQAHK 134
           L    P   +W+     P    L R++   G++  +W  S              R   H+
Sbjct: 55  LEHIIPFIPQWEAEGKFP--RELHRKAYQSGVYAPLWPTSIGGTPPPLCKGNPERPGPHE 112

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA---PKIFSREYDPTNKAPM 191
           +      ++    A       + S  +   +  P +        P++ SR         +
Sbjct: 113 VDIWHDLIINDELANCGAGGVIASCFVSLAIGLPPLLAGGLAGGPELTSRLARE-----I 167

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV 249
            +    + L +TE   G+D+A I +      DG  Y ++G K F++  P +D F     +
Sbjct: 168 VQGDKILALAVTEPYAGSDVANIQTTAVLQPDGKHYLVNGMKTFITSGPWADYFTTAVHI 227

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVST 306
            G  G      L+ D +  G+   RL  + G +S+ T  + F +       L+G      
Sbjct: 228 AGDSGL---SLLMIDRTLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGF 283

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
             +        L  A+ S    R+ + +AI YA+ R   G  LID  V++  IA++A  +
Sbjct: 284 KAIMHNFNHERLMLALQSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRV 343

Query: 367 AAATALSFRLANSFDEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            A       +A  + ++         A  ++ A  T  +C         EA + +GG  Y
Sbjct: 344 LATHYYIENIAIQWPQSSQSELAGKVALLKVQATKTFEFC-------AREASQVLGGRSY 396

Query: 425 IEERS----IARHYRESPANSILLGSGNAMVLDVLN 456
           ++       I R YRE   N+I  GS   M+     
Sbjct: 397 LQGSGPGARIERLYREVRVNAIGGGSEEIMLDLAAR 432


>gi|83648661|ref|YP_437096.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|81248645|gb|ABB69072.1| putative L-prolyl-PCP dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83636704|gb|ABC32671.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 382

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 115/362 (31%), Gaps = 28/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             L  R+   GL        +             + A             L +     A 
Sbjct: 39  RELWNRAADLGLSGLPIPEQWSGSGFGALDTMLTVEALGFGCTDMGLVFSLCAHMFACAV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +         + +  +I              K  +     +TE   G+D  A+ +   +
Sbjct: 99  PIWRYGDDTQRQRYLHRI-------------SKGELIAANAITEPESGSDAFAMRASAVR 145

Query: 221 ISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L G K F  ++P++D F++ A+ +     F V   L      GL      +K 
Sbjct: 146 DGD-TYILRGEKCFVTNAPVADLFLIYAKTDPSQSFFGVSGFLVPRDTPGLSVTDGGSKT 204

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  ++    L   +       LLG+         D  I          V  M   L ++I
Sbjct: 205 GLCTSPWGSLYMDDCRIPASALLGEEGGGAPMFHDSMIWERGCLFAAYVGAMERVLQQSI 264

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            +AR R   G  +     +   + D+ L +  +  L +R    +D+ +   E  A     
Sbjct: 265 DHARNRKQFGQSIGRNQSISDRLVDMKLRLETSRLLLYRAGWLYDQGEPYEEAIAL---- 320

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +K W  + +     +AM+  GG+G      + R   +S  + I  G+       +  
Sbjct: 321 ---SKLWISECSVLSGLDAMQVFGGTGVSSAAGVDRLLLDSLPSRIFSGTSEIQKELIAR 377

Query: 457 LL 458
            +
Sbjct: 378 HM 379


>gi|291295217|ref|YP_003506615.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber
           DSM 1279]
 gi|290470176|gb|ADD27595.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279]
          Length = 397

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 125/380 (32%), Gaps = 31/380 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAG 149
            E W+  EF      L+R+    G   +     +  +     A+ +    L  +      
Sbjct: 35  AEWWESAEFP---VHLIRKFGEMGFLGTTIPTEYGGMGASSAAYGVIGYELERIDSGLRS 91

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                S      +    +    +++ PK+ + EY                 GLTE  GG+
Sbjct: 92  FCSVQSSLVMYPIWAYGSEEQKREYLPKLATGEY-------------VGCFGLTEADGGS 138

Query: 210 DI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D  A + ++ ++            W  +  ++   I+ A+ +  V    V   +      
Sbjct: 139 DPDANMKTRARRDGGDYVLNGSKMWITNGNLAHIAIIWAKDDEGV----VRGFIVPTDTK 194

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           G    ++++K   R++ T EL   +        L    G    +  L       A  ++ 
Sbjct: 195 GFRANKIQHKASLRASVTSELVLEDVRVPASAMLPGVKGLKGPLSCLTQARFGIAWGALG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
            +     EA+ +AR R   G  +  + +++  +  +A D      L++RLA   D    +
Sbjct: 255 ALEAVYTEALEFARSRSTFGAPIASRQLVQEKLVRMAADHTKGLLLAWRLAQLKDAGTLK 314

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             + +  +           + A      A E +GGSG   E    RH           G+
Sbjct: 315 PAQVSLGKRD-------NVRAALNGARAAREILGGSGITLEYHSIRHMLNLETVDTYEGT 367

Query: 447 GNAMVLDVLNLLEKGTNLFE 466
            +   L +   L     L E
Sbjct: 368 HDIHTLILGRELTGENALGE 387


>gi|213023909|ref|ZP_03338356.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 203

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 80/203 (39%), Positives = 121/203 (59%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +A+ + L   P    DW   + S  YD       QK  + IG+G+TEK+GG+D+ + 
Sbjct: 1   MTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVLSN 60

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
           T+  ++++D  Y L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +R
Sbjct: 61  TTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLER 120

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           LK+K+GNRSNA+ E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + 
Sbjct: 121 LKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSV 180

Query: 335 AIHYARRRHVSGGILIDQPVMKR 357
           AI++A +R   G  LI+QP+M++
Sbjct: 181 AIYHAHQRQAFGKPLIEQPLMRQ 203


>gi|312079543|ref|XP_003142220.1| hypothetical protein LOAG_06636 [Loa loa]
 gi|307762615|gb|EFO21849.1| hypothetical protein LOAG_06636 [Loa loa]
          Length = 392

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 130/362 (35%), Gaps = 35/362 (9%)

Query: 68  CTAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
               E AR  +A+  TP    Y   GE        P W  L R +  +GL  +    ++ 
Sbjct: 35  QQLNEAARKFVADEVTPVAAEYDKNGE-------FP-WQVLKR-AHANGLMNTTIPSNYG 85

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +       +  A +Y     E        +++A +V +     + +       S E   
Sbjct: 86  GLELD---MVTNALIY-----ERFGYGCTGISTAMLVNI-----LAETPLILAGSNEIKK 132

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                M +  +     +TE   G+D++AI +  +K  D         W  +  +++ F +
Sbjct: 133 KYLGRMVEEPLMASFAVTESCAGSDVSAIRTSCKKKGDEYVINGSKMWITNGGVANWFFV 192

Query: 246 LAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           L + +              + D    G+   + +  +G R++ T  + F +        +
Sbjct: 193 LTRNDNDPKTPVNKAFTAFVVDADKPGINIGKKEINMGQRTSDTRAITFEDVQVPKSHMI 252

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
             +  G    MK         A ++       L EA  YA  R   G  + +   +   +
Sbjct: 253 GGLGEGFKIAMKAFDITRSLVAAIATGLASRCLDEASKYALERKTFGTQIANNQGISFML 312

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A+++  +  ++ R A      ++  E+++ A   + I K +    A    + A++  
Sbjct: 313 ADMAINLELSRLMTHRSAW-----ETELEQSSAASYYSSIAKCFAADTANIAASNAVQIF 367

Query: 420 GG 421
           GG
Sbjct: 368 GG 369


>gi|170768561|ref|ZP_02903014.1| crotonobetainyl-CoA dehydrogenase [Escherichia albertii TW07627]
 gi|170122665|gb|EDS91596.1| crotonobetainyl-CoA dehydrogenase [Escherichia albertii TW07627]
          Length = 380

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 133/352 (37%), Gaps = 18/352 (5%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY L+G K
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIY-LNGSK 153

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            F++S +   +I++   +G      V      D S  G+   +L+ K+G R ++  E+ F
Sbjct: 154 CFITSSVYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITF 212

Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +       + G        V++         A+ +      +  +A  YA +R   G  
Sbjct: 213 DDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGET 272

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +    +++   A +A+ + +   + +  A   D     S +AA         KY+C   A
Sbjct: 273 IGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAA 325

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 326 FEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|148553747|ref|YP_001261329.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498937|gb|ABQ67191.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 393

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 122/323 (37%), Gaps = 26/323 (8%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           ++       A  + +        ++L     + + + PK+ + E                
Sbjct: 83  QILAYHSGLADFVFAMQGLGTGAISLFGAEAIKQAYLPKVAAGEM-------------IA 129

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
           G  L+EK  G+D+AA+T+  +++  G        W  +  ++D   + A+     G   +
Sbjct: 130 GFALSEKEAGSDVAAMTTSARRVEGGWIINGEKTWISNGTIADLLTVFARSGEAPGARGI 189

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                  +  G       + I     AT  + F   F     LLG+             +
Sbjct: 190 SAFAFPTATRGFSITERIDVIAPHPLAT--IRFDECFVPDDHLLGEAGQGFKVAMATLDM 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
           +       ++   R +  EA+  A  R + G  L D  + + A+AD+AL   ++  L +R
Sbjct: 248 LRSTVGAAALGFARRATDEALGRATSRELFGAPLSDLQLTQAALADMALGNDSSALLIYR 307

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A + D+ + R + EAA A++ A          A   I +A++  GG+G +    + R Y
Sbjct: 308 AAWAKDQGQPRITREAAMAKLHA-------TDTAQLTIDKAVQLFGGAGVVRGNMVERLY 360

Query: 435 RESPANSILLGSGNAMVLDVLNL 457
           RE  A  I  G+     + +   
Sbjct: 361 REIRALRIYEGASEVQKVVIARA 383


>gi|108804702|ref|YP_644639.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108765945|gb|ABG04827.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 386

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 122/380 (32%), Gaps = 38/380 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHL 151
           +++  F       +      G+H   +         + A +   A + L A        +
Sbjct: 38  YEEARFPRELVPEMGALGLLGMHLEGY-----GCAGRSAVEYGLACMELEAGDSGIRTFV 92

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 + S +    +    ++W P++   E                  GLTE   G+D 
Sbjct: 93  SVQGSLAMSAIHRFGSEEQKQEWLPRMARGE-------------AVGCFGLTEPTAGSDP 139

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A++ +  ++  DG       +W   + +++  ++ A+ +       V   L   +  G  
Sbjct: 140 ASMKTFARRDGDGWVIEGAKRWIGMASIAEVAVIWARTDEEGNP--VRGFLVPTAAQGFS 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----S 326
              ++ K+  R++   ++E           L  + G          L+ A   +      
Sbjct: 198 ATNIEPKLSMRASIQCDIELGGVRVPAGAMLPGAAGLRA---PFSCLNEARYGIIWGSMG 254

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R     A+ Y+ RR   G  +    + ++ +AD+ ++I     L+  L    D     
Sbjct: 255 AARDCYECALEYSLRREQFGRPVASFQLTQKKLADMVVEIQKGMLLALHLGRMKDAG--- 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A       + K    + A  +  EA   +GG+G   +    RH     +     G+
Sbjct: 312 ----ALKHQQISLGKLNNVREAIKIAREARAILGGNGVTLDYPPLRHANNLESVRTYEGT 367

Query: 447 GNAMVLDVLNLLEKGTNLFE 466
                L +L     G   F 
Sbjct: 368 DEVHTL-ILGQAITGIEAFR 386


>gi|333028169|ref|ZP_08456233.1| putative acyl-CoA dehydrogenase domain-containing protein
           [Streptomyces sp. Tu6071]
 gi|332748021|gb|EGJ78462.1| putative acyl-CoA dehydrogenase domain-containing protein
           [Streptomyces sp. Tu6071]
          Length = 389

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 122/378 (32%), Gaps = 26/378 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              ER ++    P   AL       G        ++       +  +    ++  +    
Sbjct: 24  RWAERIEETGEVPE--ALWAELNGLGFLRMAAPVAYGGHGLPFSRWMELMEVFSRSHGSI 81

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++         +    T    K +               P     + I   LTE   G
Sbjct: 82  RMIVHVVNGIWRAMDGHATEEQRKRFVI-------------PSITGEIKIAFTLTEPGNG 128

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           T  A IT+   +  D  Y              D +++ A+VEG  G      LL   +  
Sbjct: 129 TG-ADITTSVVREGDTYYLSGSKHLITFGVRCDYYLLAARVEGSAGHEGTMALLVPRNAP 187

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMS 324
           G+  +   N +G        L F  T   +   L      ++           +  A+  
Sbjct: 188 GVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLGAEGEGLDVFLGGFLTPSRVSVAMSC 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +   A+ YAR R   G  L  +  ++  +A+ A DI AA  L    A  F+E  
Sbjct: 248 VGLAERAQQLAVAYARDRVTFGKALTQRQAIQFMLAENAADIEAAKQLVLHAARRFEEG- 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A  A + + + K     M   V  +A++  GG GY + + I R YR++ A     
Sbjct: 307 -----AEDASMQSSMAKMHAVTMLTNVTDKALQIHGGLGYWKSQKIERVYRDARAQRFEE 361

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G+       V   + + T
Sbjct: 362 GTNEVQKAVVFREVLRRT 379


>gi|254482362|ref|ZP_05095602.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037367|gb|EEB78034.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 421

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 117/385 (30%), Gaps = 37/385 (9%)

Query: 87  YGPGG---ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RA 137
           +   G     W+ +       +  + +I  G++   +   +                  A
Sbjct: 48  WDRDGLPNHDWEALL-----QSAKKLAIEAGIYSYPFPSEYGGRNGSNLGMAIIREHLAA 102

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
             L L   L+  H +  +     ++    +     +W   I             +     
Sbjct: 103 KGLGLHNDLQNEHSIVGNNIGLLLLLEYGSEEQKAEWLDGI-------------KNADKG 149

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF- 256
              G+TE   G+D   + + G++  D         W     ++DA +++A+  G+ G   
Sbjct: 150 FAFGITEPEHGSDATHMETVGRRDGDSWIINGEKTWNTGVHIADADLVMARTSGKPGDGL 209

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
            +   L   +  G+  +       N  +    + F+        + G        V+   
Sbjct: 210 GITAFLVPMTTPGVNVEEYLWTF-NMPSDHARVSFTGVRVPHSAIFGKEGYGLAVVQHFF 268

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A  S+   R  +AEA+ YA  R   G  L     ++  + D+        AL 
Sbjct: 269 NENRIRQAASSLGAARYCIAEAVSYANERKPFGKKLSLNQGIQFPLVDLHARAEMLQALI 328

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            + A   D+    S           I  Y   ++       AM+  GG GY   +     
Sbjct: 329 HKTAWLMDKDGPFS-----VSDKVSICNYQANRLCCEAADTAMQVHGGMGYSRYKPFEHI 383

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           YR      I  G+    +  V   +
Sbjct: 384 YRHHRRYRITEGADEIQMRRVAGYM 408


>gi|118473535|ref|YP_890894.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118174822|gb|ABK75718.1| glutaryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 397

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 115/357 (32%), Gaps = 35/357 (9%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVH 171
           G+H   +           A     A + L A        +      S   +    +    
Sbjct: 71  GMHLQGY-----GCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQK 125

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            +W P++                      GLTE   G++ A + ++ ++           
Sbjct: 126 NEWLPRL-------------AAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTK 172

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            W  +  ++D   + AQ +  +  FLVP         G     +  K+  R++ T EL  
Sbjct: 173 MWITNGNLADVATVWAQTDDGIRGFLVPT-----DTPGFTANEIHRKLSLRASVTSELVL 227

Query: 292 SNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            N        L ++ G    +  L          ++   R SL   I Y + R V    L
Sbjct: 228 DNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPL 287

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +  + +  +A++ +++     L+  L    D    R E+         + K    + A 
Sbjct: 288 SNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQ-------ISLGKLNNVREAI 340

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           A+  E    +GGSG   E S  RH     +     G+    +L +   L  G   F 
Sbjct: 341 AIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALT-GKAAFR 396


>gi|325676078|ref|ZP_08155760.1| glutaryl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325553118|gb|EGD22798.1| glutaryl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 387

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 113/357 (31%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R     GL                ++ +    L          +      S   + 
Sbjct: 49  KEIARELGGLGLFGMHLQGYGCAGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMFSIH 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ S E                  GLTE   G++ A + ++ ++   
Sbjct: 109 RYGSEEQKQEWLPRLASGE-------------ALGCFGLTEPDFGSNPAGMRTRARRDGA 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D   + AQ +  V  F+VP         G     +  K+  R+
Sbjct: 156 DWILDGTKMWITNGSLADVATVWAQTDDGVRGFVVPT-----DTPGFTANTVHGKLSMRA 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL            L  + G    +  L          ++   R SL  AI YA  
Sbjct: 211 SVTSELVLDGVRLPASAQLPEARGLGAPLSCLNEARFGIVFGALGAARDSLETAIAYAGT 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  +AD+ L++     L+ +L    D  +   ++         + K
Sbjct: 271 REVFDRPLAGYQLTQEKLADMTLELGKGMLLAIQLGRMKDRGEISPDQ-------ISVGK 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  E    +G +G   E S  RH     +     G+    +L +   L
Sbjct: 324 LNNVREAIAIARECRTILGANGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRAL 380


>gi|119475627|ref|ZP_01615980.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119451830|gb|EAW33063.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 423

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 129/439 (29%), Gaps = 50/439 (11%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +     L   +      + +E++ +               A  +  +   +     R D 
Sbjct: 3   FDIPRDLNDYLQELDEFIDREIKPM--------------QAENDNERFFDHRREDARTDW 48

Query: 97  VE---FHPAW----HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLM 143
                 +  W    H   R++   G +     +S+                  A  L L 
Sbjct: 49  ERGGLPNEEWEALLHRAKRKADEAGHYRYASPQSYGGKDGTNLGMAIIREHLAAKGLGLH 108

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             L+  H +  +     ++    T +   +W   +              +  +    G+T
Sbjct: 109 NDLQNEHSIVGNNVGLLLMIQYGTDKQKAEWIDGL-------------AEGKLGFAFGIT 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           E   G+D   + +  ++  DG        W      +   ++ A+  G+ G    +   L
Sbjct: 156 EPEHGSDATYMETHAERDGDGWVINGCKTWNTGIHKAPYDLIFARTSGKPGDGRGITAFL 215

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
                 G   + +     N       +  +N       + G      G V+       + 
Sbjct: 216 VPMKSEGFKVEEMLWTF-NMPTDHGTVSLTNVRVSDDAIFGGEGRGLGVVQHFFNENRIR 274

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+   +  + E+I+YA+ R   G  L     ++  + ++        AL  + A  
Sbjct: 275 QAASSLGAAQFCINESINYAKHRSPFGKPLASNQGIQFPLVELQTQCEMLRALIHKTAWQ 334

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            DE  + S           +  YW  ++       AM+  GG GY   +     YR    
Sbjct: 335 MDEYGAFS-----VSDKVSMCNYWSNRLCCEAADRAMQVHGGLGYSRHKPFEHIYRHHRR 389

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    +  V   +
Sbjct: 390 YRITEGAEEIQMRRVAGYM 408


>gi|126435571|ref|YP_001071262.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235371|gb|ABN98771.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 415

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 116/318 (36%), Gaps = 35/318 (11%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + + E                   +TE   G+D    + S  
Sbjct: 117 PTIMGRGTLAQQERWLPGLVTYE-------------KVGAWAITEPDSGSDAFGGMKSYV 163

Query: 219 QKISDGI--YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC----FLVPRLLEDGSPNGLC 271
            + +DG   Y L+G K F+++   +D  ++ A+++   G       V   + D    G  
Sbjct: 164 VRAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTFVLDRGMEGFV 223

Query: 272 YQRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             +   K+G  S+ T EL F+N               +                +  A M
Sbjct: 224 QSKPFRKMGIHSSRTGELFFNNVRLGRDRLLGETEDNEAGDGRESARSSFSAERIGVAAM 283

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++  +   L  ++ YA+ R + G  +    +++  +A + +       + FR+  +    
Sbjct: 284 ALGVIEECLKLSVDYAKSRTLWGKEIGQFQLIQLKLASMEVARMNVRNMLFRVIEASQTG 343

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S         A   K++C + A  V  EA++  GG+GY+ E  + +  R++ +  I 
Sbjct: 344 TPISLA------EASAIKWYCSQAATDVAMEAVQLFGGNGYMTEYRVEQLARDAKSLMIY 397

Query: 444 LGSGNAMVLDVLNLLEKG 461
            GS    +  V   L  G
Sbjct: 398 AGSNEVQITHVAKGLLSG 415


>gi|329897416|ref|ZP_08272071.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
 gi|328921176|gb|EGG28578.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088]
          Length = 421

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 133/437 (30%), Gaps = 46/437 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +S    L A +    + +  E++ L        A +  R  ++              WD+
Sbjct: 3   FSIPEELQAFLNEVEAFIEAEIKPL------EQADDNIRFFDHRREHART------NWDE 50

Query: 97  VEFH-PAWHALLRRSIHD----GLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQ 145
                  W ALL  +       G++   +   F                  A  L L   
Sbjct: 51  GGVPREEWEALLAEARRRADAAGVYRYPFPSEFGGRNGNNLGMAIIREHLAAKGLGLHND 110

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L+  H +  +     ++    TP     W   + +              +     G+TE 
Sbjct: 111 LQNEHSVVGNNIGLLLMLEYGTPEQKAHWIDGLATG-------------NKGFAFGITEP 157

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLED 264
             G+D   + +   +  +         W     +++  +++A+  G+ G    +   L  
Sbjct: 158 NHGSDATHMETTAIRRGNDFVINGVKTWNTGIHVAEYDMVMARTSGKAGDAQGITAFLVP 217

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
               G+  +       N  +    + F+          G        ++       +  A
Sbjct: 218 MKAPGVKIEEFLWTF-NMPSDHGTVSFTEVVVPESAIFGGEGRGLQVIQHFFNENRIRQA 276

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  +AEA+ YA+ R   G  L     ++  + ++   I    AL  + A   D
Sbjct: 277 ASSLGAAQYCVAEAVQYAKERKPFGKPLATNQGIQFPLVELQTQIEMLRALIHKTAWIMD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +E A  A     +  +W  ++       AM+  GG GY   +     YR      
Sbjct: 337 -----TEGAFAASDKVSMCNFWSNRLCCEAADRAMQVHGGLGYSRHKPFEHIYRHHRRYR 391

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    +  V   L
Sbjct: 392 ITEGAEEIQMRRVAGYL 408


>gi|33599581|ref|NP_887141.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567177|emb|CAE31091.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 117/360 (32%), Gaps = 32/360 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGH 150
              DK    P  H         G                        R+        A  
Sbjct: 29  REKDKKHEFP--HEFFEAVASGGWLGICMPEEVGGANLGVTEAALFMRVVAECGGQAAAS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  ++     V    T    + W P     E+                  +TE   G D
Sbjct: 87  SIHMNIFGLQPVVHFATQAQKQAWLPPFGRGEHK-------------ACFAVTEPDPGLD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRLLEDG 265
              + +  +K  DG Y ++G K F+ ++ ++D  ++LA+       +     +       
Sbjct: 134 TTKLKTVARKQPDGSYLITGKKVFISTAQVADHMLILARTTPIEEVKKHSEGLSLFYTKL 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             N +  + + +K+G  +  T EL   N       L+G+       +        +  A 
Sbjct: 194 DRNYVDIREI-DKLGRGAVDTNELFIDNLPVAKDALIGEEGKGLSYIFHGMNAERVLVAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   R  L  A  YA+ R V G  +     ++  +A    ++ AA  +    A+ +D 
Sbjct: 253 EQVGMGRAVLKLATQYAKERVVFGRPIGKNQGIQHPLARSWAELEAANHMMLAAADLYDR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +S   EA  A+++A       C+        ++   GG GY +E  + R  RE+    I
Sbjct: 313 GESCGSEANAAKLLASEACMQACQ-------NSILTHGGYGYAKEYHVERFMREAWIGYI 365


>gi|218671479|ref|ZP_03521149.1| acyl-CoA dehydrogenase protein [Rhizobium etli GR56]
          Length = 299

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 106/315 (33%), Gaps = 21/315 (6%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           +LS   Q++A +A           PG  + D+    P     L+     GL   +   ++
Sbjct: 2   ILSDLQQQIADLARDFAR--DRLAPGAAKRDREHLFP--RDELKEMGELGLLGMLVPEAY 57

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY 183
                       A             +MS   +   +  L   T    + + PK+ S E+
Sbjct: 58  GGSDTGVVAYAAALEEIAAGDGPCSTIMSVHSSVGCVPILKFGTEEQRQRFLPKLASGEW 117

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243
                          G  LTE + G+D + + ++ +   D        ++  S    +  
Sbjct: 118 -------------IGGFALTEPQAGSDASNLKTRARLDGDHYVIDGAKQFITSGKNGNVI 164

Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           I+ A  +   G   +   +      G    R++ K+G  S  T ++ F++        L 
Sbjct: 165 IVFAVTDPDAGKKGITAFIVPTETPGYEVIRVEEKLGLHSTDTCQIAFNSMRIPSELRLG 224

Query: 304 -VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
               G    +  L    +  A  +V   R +   A  YAR R   G  + +   +   +A
Sbjct: 225 AEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARDYARERTAFGKPIFEHQAVAFRLA 284

Query: 361 DIALDIAAATALSFR 375
           D+A+ I AA  L   
Sbjct: 285 DMAVRIEAARQLVLH 299


>gi|312137819|ref|YP_004005155.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311887158|emb|CBH46467.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 387

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 113/357 (31%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R     GL                ++ +    L          +      S   + 
Sbjct: 49  KEIARELGGLGLFGMHLQGYGCAGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMFSIH 108

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ S E                  GLTE   G++ A + ++ ++   
Sbjct: 109 RYGSEEQKQEWLPRLASGE-------------ALGCFGLTEPDFGSNPAGMRTRARRDGA 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D   + AQ +  V  F+VP         G     +  K+  R+
Sbjct: 156 DWILDGTKMWITNGSLADVATVWAQTDDGVRGFVVPT-----DTPGFTANTVHGKLSMRA 210

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL            L  + G    +  L          ++   R SL  AI YA  
Sbjct: 211 SVTSELVLDGVRLPASAQLPEARGLGAPLSCLNEARFGIVFGALGAARDSLETAIAYAGT 270

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  +AD+ L++     L+ +L    D  +   ++         + K
Sbjct: 271 REVFDRPLAGYQLTQEKLADMTLELGKGMLLAIQLGRMKDRGEISPDQ-------ISVGK 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A A+  E    +G +G   E S  RH     +     G+    +L +   L
Sbjct: 324 LNNVREAIAIARECRTILGANGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRAL 380


>gi|288932871|ref|YP_003436931.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288895119|gb|ADC66656.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 394

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 134/379 (35%), Gaps = 39/379 (10%)

Query: 70  AQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             E AR  A    P+        E+ +K EF   +   +      G    +    +    
Sbjct: 12  IAEAARDIAKDFPPEY-----WREKDEKGEFAEEFWKAIS---DAGFVGIVIPEEYGGSG 63

Query: 129 RKQAHKIRAARLYLMAQLEA---GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                 + A               +L+   V  A  +    T    + + PKI       
Sbjct: 64  YGMTELLIAMEELAANGCGMGGVWYLVLTEVFGALTIVRHGTEEQKEKYLPKI------- 116

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFI 244
                  K  +   + LTE   GT+   I ++  K  D  + ++G+K F+S    +   +
Sbjct: 117 ------AKGKLEFCMALTEPDAGTNTLNIRTRAVKDGDE-WVINGNKIFISGADRAKGML 169

Query: 245 MLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           ++A+   R       + +   L D     +    +  K G   + T E+ F+N       
Sbjct: 170 IIARTTPREEAPKRTYGISLFLADLPNPAVKINPIP-KHGINYSKTCEVSFNNLRLPENA 228

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+   +     + D      +  A  ++   R+++++A+ Y+++R V    +     ++ 
Sbjct: 229 LIPPQDEGWYLILDTLNPERMSFAAAAIGIARLAVSKAVEYSKQRKVFQDPIGSYQGLQF 288

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A+    +  A  ++ + A  FD   S  E        A + K    +     +  AM+
Sbjct: 289 PLAEAYATLECAKLMNLKAAWLFDNNASYRE----VGDAANMAKVVAVEAGIRAVYWAMQ 344

Query: 418 CIGGSGYIEERSIARHYRE 436
             GG GY +E  + R +RE
Sbjct: 345 TFGGYGYTKEYDVERWWRE 363


>gi|55581734|emb|CAH55646.1| putative acyl-CoA dehydrogenase [Serratia marcescens]
          Length = 385

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 133/403 (33%), Gaps = 32/403 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ LS   Q L+  A     ++        R  +         L +++   G   +    
Sbjct: 2   DFNLSSEQQALSESAQRFAREVLDQDAHA-RLSRQVLS---LDLWQQAAAYGFTRAPVTT 57

Query: 123 SFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +F  +       A  I A          +  L +        ++   +  +   +   + 
Sbjct: 58  AFGGLGMNALDTALMIEALGKGSRDIGMSFSLCAHLCACVIPLSRFGSEALKARYLEAL- 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238
                           +      TE   G+DI A+ S  Q    G Y L+G+K F+++ P
Sbjct: 117 ------------AAGKLIAANAATEPDAGSDIYAMKSTAQPCEGG-YRLNGNKIFITNAP 163

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           ++D FI+ A+     G   V   + +    GL    +  K    +    EL F++ F   
Sbjct: 164 IADIFIVYAKTHPEHGFMGVSAFVLEKGMPGLNVGAVSPKDCLSNCPWSELTFNDVFIPE 223

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              + +           +  +   +S   +  M      A+ YA++R   G  +     +
Sbjct: 224 TQRIGMPGAGGAIFHDSMIWEKGCLSALFIGAMERVFDSALDYAKQRRQFGKAIGQFQSV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              I D+ L +     + +R     D  +        A I   ++K    + A     +A
Sbjct: 284 SNRIIDMKLRLEQCRLMLYRACWKHDRGQD-------AEIDIAMSKLLISEYAVQSALDA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG+G  +E  + RH      + I  G+       V   L
Sbjct: 337 IQIFGGAGMDQELGLVRHLLNVIPSRIFSGTNEIQKEIVARKL 379


>gi|120405623|ref|YP_955452.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958441|gb|ABM15446.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 396

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 106/357 (29%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL                A+ +    L  +       +      +   + 
Sbjct: 58  RELAAEIGKLGLLGMHLQGYGCSGSTATAYGLVCQELEAVDSGLRSLVSVQGSLAMFAIH 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      W P + + E             +    GLTE   G++   + +  ++   
Sbjct: 118 RWGSEEQRTRWLPGMAAGE-------------LIGCFGLTEPDFGSNPGGMRTTARRDGS 164

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  ++ ++D  I+ A+         V       S  G     +  K+  R+
Sbjct: 165 DWILNGSKMWITNASVADVAIIWAR-----SKEGVLGFAVPTSTPGFHATEMTRKLSLRA 219

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T E+   +        L  + G    +  L          +V   R  L   + Y   
Sbjct: 220 SVTSEIHLDDVRVPEDARLPEAQGLKAPLSCLSEARFGIVFGAVGAARDCLQTTLDYVGT 279

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V    L    + +  IAD+A+++  A  L+  L    DE + R E+         + K
Sbjct: 280 RAVFDRPLAGYQLTQAKIADMAVELGKAQLLALHLGRLKDEGRIRPEQ-------VSVGK 332

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  +  +    +G +G   E  + RH     +     G+     L +   L
Sbjct: 333 LNNVREAIKIARQCRTLLGANGITLEYPVLRHANNLESVLTYEGTSEVHQLVIGEAL 389


>gi|226227877|ref|YP_002761983.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
 gi|226091068|dbj|BAH39513.1| glutaryl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27]
          Length = 402

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/430 (15%), Positives = 143/430 (33%), Gaps = 55/430 (12%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           + ++ D+ L          + + ++     V+     E  R  +   P+L   G  G   
Sbjct: 15  DLFNIDAALTEEERAIRDTIRQFVDEKLIPVMGDCYVE-GRFPDELIPELAELGVLGAN- 72

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
                      L       GL    +    + + R        + +   A ++   +M P
Sbjct: 73  -----------LPEEYGCAGLSSVAYGLIMQELERGD------SGIRSFASVQGALVMYP 115

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                  +    +    + + PK+              K       GLTE   G++ + +
Sbjct: 116 -------IFAFGSEEQKRHYLPKL-------------AKAEYIGCFGLTEPDFGSNPSGM 155

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++ ++ +DG + L+G K ++++   +   ++ A+         +   +      G   +
Sbjct: 156 ITRARQQADGSWILNGAKMWITNGSKAHVAVVWAKTGDSTDDSSIRGFIVPTDTPGFQAR 215

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SGM 328
             K K+  R++ T EL  S+        L  S G       L+ L  A   +        
Sbjct: 216 DQKGKLSLRASDTSELVLSDVHLPADAILPHSNGLKS---PLMCLTQARYGISWGVLGAA 272

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              L EA+ Y++ R +    +    + +  +AD+  ++     +S  L    D       
Sbjct: 273 MACLEEAVSYSKSRVMFDKPIGGFQIQQVRLADMFTELVKGQLVSLHLGRLKDAGNFTPV 332

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           + + A+          C +A  +  E    +G +G + E S  RH     +     G+ +
Sbjct: 333 QVSLAKR-------NNCDIATNIARETRRLLGANGILAEYSAMRHMANLESVYTYEGTHD 385

Query: 449 AMVLDVLNLL 458
              L +   L
Sbjct: 386 VHSLILGQAL 395


>gi|289641750|ref|ZP_06473908.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508394|gb|EFD29335.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 383

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 116/363 (31%), Gaps = 24/363 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + R+    G+        F     +    +  A   L             V       
Sbjct: 40  FDIQRQLADLGVLGIGLPEQFGGTGVEDPITLGLAAETLAYGDVNIASAPVQVGLVGSQL 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T  V K++ P++ + E             + + + LTE   G+D  A+ +  + ++ 
Sbjct: 100 AHGTTAVQKEYLPRLIAGE-------------ITVAIALTEPGSGSDAGALRTVAEPVAG 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G            +  + A ++ A+  G      V   +      G+    +   +G   
Sbjct: 147 GWRLRGEKTAISWACNATATLVYAREPGSARSKGVSCFVVPTDTPGVTVSHMPG-MGCLP 205

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                + F   F     L+G+       V            +M +   R SL EA  YA 
Sbjct: 206 LGWGSIHFDEVFVPTENLIGEYGRGFHSVMGHFDFSRAALGLMCLGAARASLDEAADYAL 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +   +   +A+ A  + AA  L +R        +  +  A+ ++   PI 
Sbjct: 266 QREAFGRPIAEYQGISFLLAEQATYLEAARWLCYRALWLRHAGRPHTAHASMSKWWPPIV 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                  A   I  AM+  G  GY  E  + + +R+  A  +  G+       +   +  
Sbjct: 326 -------AKDAIEAAMKIYGNLGYATEFPLQQRFRDVMAYLVADGTAEIQKRIIAKDVLG 378

Query: 461 GTN 463
           G +
Sbjct: 379 GRH 381


>gi|242817405|ref|XP_002486949.1| acyl-CoA dehydrogenase [Talaromyces stipitatus ATCC 10500]
 gi|218713414|gb|EED12838.1| acyl-CoA dehydrogenase [Talaromyces stipitatus ATCC 10500]
          Length = 437

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/298 (21%), Positives = 111/298 (37%), Gaps = 22/298 (7%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A  +A   TP   K W P + S                   LG+TE   G+D+A I++  
Sbjct: 130 APSIARFGTPEQRKRWLPGVASG-------------KTRFCLGITEPDAGSDVANISTTA 176

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   D        KW +++ +   +   A   G  G   V  L+      G+  +R+ N 
Sbjct: 177 KTEGDYYIVNGAKKW-ITNGLWADYCTAAVRTGGPGRKGVSVLVIPLKQKGVTRKRMHNS 235

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            G  ++ +  LEF +       L+G +N     V        L  A  ++   RV + +A
Sbjct: 236 -GVNASGSTFLEFDDVRVPADHLIGRVNEGFQIVMSNFNSERLSLACAALRLARVCVEDA 294

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            +YA +R   G  LI +  ++  I    + I  A +   +L    +  K R         
Sbjct: 295 FNYAVQRETFGAPLITRQAIQFKITKCGMLIEPAQSFLEQLVYIIETTKDRPNAGNI-GG 353

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAM 450
           M  + K    +     + EA +  GG+GY +      + +  R+   + +  GS   M
Sbjct: 354 MTALLKVMSTRALEKCVREAQQIFGGAGYNKGGKGVRVEQISRDVRVHVVGGGSEEIM 411


>gi|54022895|ref|YP_117137.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014403|dbj|BAD55773.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 412

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 128/378 (33%), Gaps = 44/378 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS---- 160
           A+   S+   L              +        +  +   +     +   + SA     
Sbjct: 52  AMATESLEKSLAAEEARTEGGDAPERGGSGAFGQQSMMAVVVSELSGVCLGLVSAMGVST 111

Query: 161 -----MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAI 214
                 +    T    K W P++ + E                   +TE   G+D    +
Sbjct: 112 GLGAATIMARGTLAQKKRWLPELVTME-------------KVAAWAITEPDSGSDAFGGM 158

Query: 215 TSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPN 268
            +  ++  +  Y L+G K F+++   +D  ++ A+++            V   + D    
Sbjct: 159 KTYVRRDGED-YLLNGQKTFITNGPYADVIVVYAKLDEGDANVDKRDRKVLTFVLDKGME 217

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           GL   +   K+G  ++ T EL F N       LLG+     G            +  + V
Sbjct: 218 GLTQGKPFKKMGLHASPTGELFFDNVRLGRDRLLGETEEHRGGDGRESARTNFVAERVGV 277

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +   + + E      + YA+ R + G  +    +++  +A + +       + F      
Sbjct: 278 AFQALGIIEECHRLCVEYAKNRRLWGQEIGRFQLVQLKLAKMEIARINVRNMVFSTLERG 337

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K  S   A A  +      +C + A  V  EA++  GG+GY+ E  + +  R++ + 
Sbjct: 338 RAGKPLSLAEASAMKL------YCSETATEVAMEAVQLFGGNGYMSEYRVEQLARDAKSL 391

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS    V  +   L
Sbjct: 392 MIYAGSNEIQVTHIAKGL 409


>gi|325495969|gb|EGC93828.1| crotonobetainyl-CoA dehydrogenase [Escherichia fergusonii ECD227]
          Length = 380

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|46138579|ref|XP_390980.1| hypothetical protein FG10804.1 [Gibberella zeae PH-1]
          Length = 426

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 142/407 (34%), Gaps = 44/407 (10%)

Query: 65  VLSCTAQELARMANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           +L+   + +   A      QL        R +   + P    +L      GL  +  +  
Sbjct: 44  LLTEEERAIGDTAERYCQEQLLPRVLKAYRDES--YDP---KILEEMGELGLLGATIEGY 98

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                   A  +    +  +       +   S      +    +    + + PK      
Sbjct: 99  DCAGASSVAGGLITRAVERVDSGYRSGMSVQSSLVMGGIYEHGSAEQKEKFLPK------ 152

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSG-HKWFLSSPMS 240
                  M K  +    GLTE   G+D  ++ +  +      G Y LSG   W  +SP++
Sbjct: 153 -------MAKGKMLGAFGLTEPNHGSDPGSMETVAKPHPTKKGYYSLSGAKTWITNSPIA 205

Query: 241 DAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           D  ++ A++   G++  FLV R  +D  P  L    +K+K G R++ T  ++  N     
Sbjct: 206 DVLMVWAKLQETGKIRGFLVER--KDCPPGTLETPAIKDKNGLRASITGMIQLDNCPVP- 262

Query: 299 LGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-GGILID 351
               N     VE ++     L++A   ++      +   LA A  Y+  R    G  L  
Sbjct: 263 ---ENNMFPEVEGLRGPFSCLNNARYGIAMGVMGALEDCLARARTYSLERKQFKGNPLAR 319

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +AD + D A  T  + ++    DE K+  E       M  + K   C  A   
Sbjct: 320 YQLVQKKLADASTDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDTALRN 372

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                E  GG+   +E  I RH           G  +   L +   +
Sbjct: 373 ARLLQEIFGGNAASDEYMIGRHVANLFVTQTYEGQSDIHSLILGRAI 419


>gi|269956889|ref|YP_003326678.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305570|gb|ACZ31120.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 394

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 119/387 (30%), Gaps = 43/387 (11%)

Query: 95  DKVEFHPAWH---------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           D+V    A+           ++ +    GL    +                A        
Sbjct: 24  DQVVSPAAYRFDTEGRLPVEIVHQMGELGLFGLPFPEEVGGQGGDYVTLCLAVEALARVD 83

Query: 146 LEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +   V    M +    T    + W P + +                    GLTE
Sbjct: 84  QSIAVTLEAGVGLGIMPIYRHGTDAQREQWLPDLVAG-------------RTLAAFGLTE 130

Query: 205 KRGGTDIAAITSQG--QKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRVG 254
              G+D AA  +    +    G + + G K F+++  +    ++        A       
Sbjct: 131 AGAGSDAAATRTTARLEPGEGGAWVIDGSKQFITNSGTPITSVVTVVAVTGSATGPDGSA 190

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK 313
              +  +L      G       +K+G  ++ T  L  +         L     G    + 
Sbjct: 191 APELSAILVPAGTPGFVVGPSYDKVGWHASDTHPLMLNGVRVPAANLLGERGRGYANALH 250

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +L    +  A ++    +  L EA+ YA  R V G  +     +   +A +   + AA  
Sbjct: 251 VLDEGRIAFAALATGAAQGCLEEALRYAGERTVFGASIGSHQHVAFTLARMQARVHAART 310

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             F  A           E       A + K    + A A   +A +  GG G++ E  +A
Sbjct: 311 SWFDAAQKLVHGLPSKAE-------ASVAKLVASEAAMANARDATQIFGGYGFMNETPVA 363

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           RHYR+S    I  G+    ++ +   L
Sbjct: 364 RHYRDSKVLEIGEGTSEVQLMIIARDL 390


>gi|229491534|ref|ZP_04385355.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229321215|gb|EEN87015.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 380

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 120/359 (33%), Gaps = 27/359 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H    A   +    G         +                     +     + P+V + 
Sbjct: 39  HNHNQAFYEKMAELGWLGLTVPEEYGGSAGSTVDLCIFLE-EAAKGMAPIGGLGPTVITG 97

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           +      +P   +     I                  +  + ++E   G+D+  ++ + +
Sbjct: 98  AAYEKFGSPAQKEAVLGGIV--------------RGASQSISMSEPEAGSDVGNLSCRAE 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           K+  G        W  ++  ++  +++A+   G      +         +GL    + + 
Sbjct: 144 KVDGGWLINGQKTWCSNAHFAENILLVARTSRGEGKHEGLTMFHVPADISGLKISGI-DT 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G +     +L F++TF     ++G++      +     +  L  A M +   + +  + 
Sbjct: 203 MGGKEVN--DLYFTDTFLPDDAVVGEVGNGWRQLMAGLNIERLILAAMMLGTAQRAFDDT 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +   R   G  +     ++  IAD+A +I     L + +A   D   ++         
Sbjct: 261 LEFVTTRKQFGRPVGSFQALRHRIADLATEIECGRLLVYSVARMVDANPTK-----MFPR 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            A + K    + A  V  E M+ +GG GY  E  +  H R++  +SI  G+       +
Sbjct: 316 EASMAKLKLTETAKKVALEGMQMMGGYGYATEFDMEHHVRKTLVSSIYGGTNEIQRDII 374


>gi|111020864|ref|YP_703836.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110820394|gb|ABG95678.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 430

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 127/398 (31%), Gaps = 42/398 (10%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             A      +     GG+  ++++  P           +GL    +              
Sbjct: 54  DFATRAIEPVAHRIAGGD--ERLDGFP--RDAFESMAAEGLFRIPFPPDVGGDGLSHRAT 109

Query: 135 IRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
             A  +  +A           V    A       T    + W   +   E          
Sbjct: 110 ATAVAVEELAYYSNSVAAIYDVHCILAGTALDQGTDEQRRRWLRPLVEGE---------- 159

Query: 193 KTSVAIGLGLTEKRGGTDIA--AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
              +      +E    +D++  A++++     DG       +W  +S ++   ++LA+  
Sbjct: 160 ---IVGAFATSEPGASSDLSPDAVSTEATPDGDGWILRGRKRWITNSVVACVVVVLARTG 216

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
             +  F+VP      + +G+       K+GNR   T ++   +       +LG +     
Sbjct: 217 DDLTTFIVPT-----NASGVTIGTPDRKLGNRGQITADVNLDDVRLGPDSVLGRVGGGLR 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
                     +      V   + +    + + + RH  GG L  +   +  +AD A D+ 
Sbjct: 272 LALQTLTYGRIGIGAAGVGMAQAAFDRTVAHLKSRHAFGGSLASKQHWQFVMADYAADLE 331

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE- 426
           +A +L  + A   D  +   E        A + K     +A  +  +A++  GG G++  
Sbjct: 332 SARSLYLKAALRLDAGERFPE------PEAVMAKLRGTDLAARIARDAVQAFGGLGFVRS 385

Query: 427 ------ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 E  +   YR+S    I  G+       +   +
Sbjct: 386 LGADDTEGPVEAIYRDSKIGEIYEGANEIQRWVLARQI 423


>gi|226308998|ref|YP_002768958.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226188115|dbj|BAH36219.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 380

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 120/359 (33%), Gaps = 27/359 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H    A   +    G         +                     +     + P+V + 
Sbjct: 39  HNHNQAFYEKMAELGWLGLTVPEEYGGSAGSTVDLCIFLE-EAAKGMAPIGGLGPTVITG 97

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           +      +P   +     I                  +  + ++E   G+D+  ++ + +
Sbjct: 98  AAYEKFGSPAQKEAVLGGIV--------------RGASQSISMSEPEAGSDVGNLSCRAE 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           K+  G        W  ++  ++  +++A+   G      +         +GL    + + 
Sbjct: 144 KVDGGWLINGQKTWCSNAHFAENILLVARTSRGEGKHEGLTMFHVPADISGLKISGI-DT 202

Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G +     +L F++TF     ++G++      +     +  L  A M +   + +  + 
Sbjct: 203 MGGKEVN--DLYFTDTFLPEDAVVGEVGNGWRQLMAGLNIERLILAAMMLGTAQRAFDDT 260

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + +   R   G  +     ++  IAD+A +I     L + +A   D   ++         
Sbjct: 261 LEFVTTRKQFGRPVGSFQALRHRIADLATEIECGRLLVYSVARMVDANPTK-----MFPR 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            A + K    + A  V  E M+ +GG GY  E  +  H R++  +SI  G+       +
Sbjct: 316 EASMAKLKLTETAKKVALEGMQMMGGYGYATEFDMEHHVRKTLVSSIYGGTNEIQRDII 374


>gi|294811795|ref|ZP_06770438.1| Acyl CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|326440462|ref|ZP_08215196.1| glutaryl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294324394|gb|EFG06037.1| Acyl CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
          Length = 397

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 113/368 (30%), Gaps = 28/368 (7%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R     G               +  + +    L          +      +  
Sbjct: 56  PVVRELARELGGLGALGMSLTGYGCAGATQIQYGLVCLELEAADSGIRSLVSVQGSLAMY 115

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + W P + + E             V    GLTE   G+D A + +  ++
Sbjct: 116 AIHRYGSEEQKRRWLPAMAAGE-------------VIGCFGLTEPDHGSDPAGMRTHARR 162

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++   ++ A+ +  +  F VP         G     + +K  
Sbjct: 163 DGSDWVLTGRKMWITNGSVAGVAVIWARTDEGIRGFAVPT-----ETPGFSAVDIPHKWS 217

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R++ T EL            L  + G    +  L          S+   R S A A+ Y
Sbjct: 218 LRASVTSELVLDGVRLPADAVLPGAVGLRAPLSCLSHARYGIVWGSMGAARSSFAAALEY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +    + +  +AD+A+++     L+  L    D  +   E+ ++      
Sbjct: 278 ARTREQFGRPIGGFQLTQAKLADMAVELHKGILLAHHLGVRMDAGRLLPEQVSFG----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K    + A  +   A   +G +G   E  + RH     +     G+   M   VL   
Sbjct: 333 --KLNNVREAIDICRTARTILGANGISLEYPVMRHAANLESVLTYEGTVE-MHQLVLGKA 389

Query: 459 EKGTNLFE 466
             G + F 
Sbjct: 390 LTGLDAFR 397


>gi|255513841|gb|EET90106.1| acyl-CoA dehydrogenase domain protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 409

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 130/407 (31%), Gaps = 32/407 (7%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEF-----HPAWHALLRRSIHDGLHCSIWDR 122
              +EL  +++ +   L       E   + E+     H      +       L     ++
Sbjct: 10  DDLKELGALSDKDVGVLEEADKAAEELAEPEYEHYLKHEFNSEAIGILAKHNLFGVPVEK 69

Query: 123 SFEPVV-RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
            +         H +   RL  +    +      +  +   V    T     +    + S 
Sbjct: 70  KYGGTGSGALVHALVQQRLGQLGLGVSTLYDVQTFIAEPTVQRWGTEEQKSEHLKNMCSG 129

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                              GLTE   G+D + I++  ++   G           +  + +
Sbjct: 130 -------------KSIFAFGLTEPGEGSDQSLISTTYEESQGGYLLNGTKYLISNGSICN 176

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLG 300
             I+ A  +       +   + D    G   + +L+ KIG  ++ T  L F N       
Sbjct: 177 YIILFAARKAPGPKKEITAFIVDTKSKGFKVEMKLEEKIGLFTSDTSMLSFENVLVEKDA 236

Query: 301 DLNVSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354
              V  G    +++    L +  + +    + + EA     +  +R R   G  +    +
Sbjct: 237 ---VLGGIGNGLRVAYSALLNGRIGIGSACIGVIEASLNASLKRSRERVQHGKQIGKHQL 293

Query: 355 MKRAIADIALDIAAATALSFRLA---NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +++ I+ +  ++  A    F  A     FD+  +         + + + K    ++A   
Sbjct: 294 IQQHISAMRQNLEMARWPIFYAAMKKQEFDKDPNNVPALREMDMYSAMAKRIASRLAFES 353

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              A++  GG GY     + + + +S    I  G+     L + + L
Sbjct: 354 ADRAVQVHGGFGYSLMSPVGQLFCDSRVARIYEGTDEIHDLKIASEL 400


>gi|218552624|ref|YP_002385537.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|293476703|ref|ZP_06665111.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B088]
 gi|226699663|sp|B7M0D6|CAIA_ECO8A RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|218359392|emb|CAQ96931.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           IAI1]
 gi|291321156|gb|EFE60598.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B088]
          Length = 380

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLLPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|321264333|ref|XP_003196884.1| hypothetical protein CGB_K3730W [Cryptococcus gattii WM276]
 gi|317463361|gb|ADV25097.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 253

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 17/231 (7%)

Query: 235 LSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            ++  ++ F +LA  + +      +   + D    G+   + +  +G R++ T  + F +
Sbjct: 26  TNAGHANWFFVLAITDSKASPTRGMTGFIVDADTEGIILGKKEINMGQRASDTRMVTFQD 85

Query: 294 TFGFLLGDLNVSTGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGG 347
               ++ + NV   P E  KI +   D         +V   + +L EA  YA+ RH  G 
Sbjct: 86  V---VIPEENVLGSPGEGFKIAMKAFDITRPLVSAAAVGLAQRALEEATKYAQERHTMGQ 142

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+A+ + AA  L ++ A + D  +  +         A + K +  K 
Sbjct: 143 PIINHQGVAFMLADMAIGVEAARGLVWKAAWAKDCMQRNT-------FYASMAKAFAGKT 195

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A       ++  GG+G+  E  + + YR++    +  G+     L V   L
Sbjct: 196 AVENANLGVQVFGGAGFNTEMPMEKLYRDAKIYELYEGTSQIQKLIVSKHL 246


>gi|226308379|ref|YP_002768339.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187496|dbj|BAH35600.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 395

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 124/360 (34%), Gaps = 31/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ R    GL      RS   +      ++     +  +        S S+  AS + L
Sbjct: 56  DLVTRMAEIGLFGITLPRSVGGLGWTVEQQVLLTFEFTRSSAVYRSRFSTSIGLASQILL 115

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P + + E               +   LTE++ G+D +A+ +      D
Sbjct: 116 EYGTDAQREQYLPAMAAGEC-------------VMAFALTEEQAGSDASAVRATATNTPD 162

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G       ++  +   +D  ++ A+  +G +  FLV     D    G+  +  +   G+ 
Sbjct: 163 GYVINGEKRFITNGAWADVLVVFARTADGEISSFLV-----DRESPGVETRVPELMNGHA 217

Query: 283 SNATVELEFSNTFGFLLGDLNV--STGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIHY 338
                E+   +        +      G +  M+         A  +V      LAEA+ Y
Sbjct: 218 EGPVAEISLRDVVVSADRLIGGATGLGMIHAMRGINQARTHVAATAVGQATRMLAEAMKY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R      L +   ++  +     ++ A  A+    A  FD         A A     
Sbjct: 278 AGSREQFDQPLAEFGAVQAMLGRSYAELEAGRAMILDCAREFDRGTPPRHRIAAA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C +MA  V   A++ +GG G +    + R +R+  A  I  G+      ++   L
Sbjct: 333 --KLYCTEMASVVGDRAVQVLGGVGIVGNHPVPRMWRDVRALRIYEGASQIHERNLARAL 390


>gi|113868426|ref|YP_726915.1| putative acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527202|emb|CAJ93547.1| putative acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 389

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 135/392 (34%), Gaps = 34/392 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L A+       D  +   A  AL+R+    G        +    +     +        
Sbjct: 22  ELDAWCAQHLHVDHSDTDAACRALVRQLGEAGWLRYCVPAAHGGALPALDSRSLCLLRET 81

Query: 143 MAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +A+ +  A    +     +  ++L  +  +   + P++   E                  
Sbjct: 82  LARHDGLADFAFAMQGLGSGAISLAGSDALRAHYLPRVARGE-------------AIAAF 128

Query: 201 GLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
            L+E   G+D+AA+    +   DG          W  +  ++D + +  +     G   +
Sbjct: 129 ALSEPEAGSDVAAMQCSARLSDDGSHYVIDGAKTWISNGGIADFYCVFVRTGEASGARGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
              + D    GL      + +     AT  L F +    +   L  +    +    ++ L
Sbjct: 189 SAFVVDADTPGLTIAERIDVMAPHPLAT--LRFDDCRVPVGNRLGEAGQGFK--VAMMTL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALS 373
           D    SV+   +    A           R + GG+L D  + + AI D+A  I AA  L+
Sbjct: 245 DIFRASVAAAALGFGRAALDDALARACARPMFGGVLADLQLTQAAIGDMATAIDAAALLT 304

Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +R A   D + +  + EAA A+++A        + A  VI  A++  GG G      +  
Sbjct: 305 YRAAWLRDVKGQRTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVKVGTRVES 357

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            YRE  +  I  G+     L +      G   
Sbjct: 358 LYREIRSLRIYEGATEVQKLIIARETLAGRKA 389


>gi|90408870|ref|ZP_01217010.1| DNA polymerase II [Psychromonas sp. CNPT3]
 gi|90310033|gb|EAS38178.1| DNA polymerase II [Psychromonas sp. CNPT3]
          Length = 633

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 143/389 (36%), Gaps = 46/389 (11%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            E+ D  +  P    +++  +  GL      + +  +   Q +  R     +MA      
Sbjct: 88  AEQVDATQKIPD--KVIQGLVDLGLFAMKTPKKYNGLGLTQVNYNRV----MMAISSYCG 141

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +  +++   + +            K+F  +       P+ +        LTE   G+D
Sbjct: 142 STAVLLSAHQSIGVPQPL--------KLFGTQAQKDKYLPLFRLGKISAFALTEPEVGSD 193

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV---GCFL--VPRLLE 263
            A + +      DG   Y      W  +  ++D  +++A+ E ++   G  +  +   + 
Sbjct: 194 PAKMETTATLSDDGKHYYINGLKLWCTNGLIADVLVVMAKTEDKILSSGEKIQQISAFIV 253

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAI 322
           +    G+      + +G R      L+F+N    +    N+  G  + +K  L  L++  
Sbjct: 254 EREYPGIEILHRCDFMGIRGIENGLLKFNNVKVPV---ENIILGKGKGLKLALATLNTGR 310

Query: 323 MSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +++           L  A  + R R   G  + +     + IA IA    A  A++   +
Sbjct: 311 LTLPAAATGMSKYCLGVAREWGRERVQWGRPIGEHEAGAKKIAFIASSTFAMQAITSLTS 370

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE---------- 427
           +  D+      +    RI A + K +C +++  VI E M+  GG GY +           
Sbjct: 371 HMADD------DTQDLRIEAAMAKLFCSELSWQVIDETMQLRGGRGYEKASSLKARGEKA 424

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456
             I R  R+   N I+ G+ + M L +  
Sbjct: 425 YPIERLMRDCRINRIIEGTSDIMKLFLAR 453


>gi|154244863|ref|YP_001415821.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158948|gb|ABS66164.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 390

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 124/405 (30%), Gaps = 41/405 (10%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           ++L  L +      A+ LA                G R D+         L+R     GL
Sbjct: 13  EDLTALRDLAAKFAAERLAP---------------GYR-DRERTGSFGKDLVREMGSLGL 56

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                   F  +     +               G++   +  +  +VA    P +   W 
Sbjct: 57  IAPELPEEFGGIGSGSMYSGVIIEEIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWL 116

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235
           P++ + E               + + LTE RGG+D A +  + ++  D            
Sbjct: 117 PRLTAGEIM-------------LAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKTSIS 163

Query: 236 SSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++  + A I+ A+          +  +       G+   R  + +G  +     + F N 
Sbjct: 164 AADQAAAAIVFARTGRPEDKAHGISAIFVPMDTPGISTTRFTD-VGQHAIGRGSIFFDNV 222

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 LLG+ N     V            +  +   R SL EA  Y   R   G  L  
Sbjct: 223 KVPADHLLGEENKGFVQVMQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAA 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              +   +AD    I  A  LS+      D       EAA A+   P+       +A   
Sbjct: 283 FQGITHQLADFDTRIEGARLLSYNALWLKDNGLPHVAEAAMAKWWPPL-------LAYEA 335

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           I   +   G + Y  E    +  R+     I  G+ + M   +  
Sbjct: 336 IHACLLVHGHAAYSNELPFEQRLRDVLGLQIGDGTAHIMKNIIAR 380


>gi|325001171|ref|ZP_08122283.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 380

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 69/414 (16%), Positives = 140/414 (33%), Gaps = 42/414 (10%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101
            L A +  +  ++      +   V     Q +A +A+               WD+ EF  
Sbjct: 6   PLPADVYGYAGLLDDTDTEILARVRRFAEQRIAPIADDY-------------WDRAEFP- 51

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             H L+       +     D    P   +      +  L  +    A      +  + + 
Sbjct: 52  --HELIPGFAELDVVGLARDWPDRPARSRLLTSFVSMELSRIDPSMATFFGVHAGLALTS 109

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           + L  +    + W P              M++        L+E  GG+D+A  + +  ++
Sbjct: 110 IDLCGSEEQKERWLP-------------AMRRMERIGAFALSEPHGGSDVAGGLETTAER 156

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D        +W  +   +D  ++ A+             + +    G    +++ K+ 
Sbjct: 157 DGDAWVLNGAKRWIGNGTFADLVVVWARDVADDAVKG---FVVEKDMPGFAATKMEGKLA 213

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            RS    +L F+         L  +    +  ++L       A  +V  M      A  Y
Sbjct: 214 LRSVQNADLTFTGVRVPEANRLPGAQSFADTNRVLRVTRGGVAWNAVGAMAGVYELARDY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +    +++  +  I  ++ A+  ++ R+A   D+   R E+AA A+  A 
Sbjct: 274 AVDRVQFGQPIAAFQLVQDHLVSILGNVTASLGMAVRIAQMQDDGTFRDEQAALAKRQAT 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           +       M    +A A E  GG+G + E  + R + ++ A     G+     L
Sbjct: 334 L-------MLRDSVARAREVFGGNGILLENKVGRFFNDAEALYSYEGTKEINTL 380


>gi|303312981|ref|XP_003066502.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106164|gb|EER24357.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036633|gb|EFW18572.1| glutaryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 429

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 91/445 (20%), Positives = 154/445 (34%), Gaps = 53/445 (11%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWD 95
           SLL        +V       L     S +A           AN  TP+  A      ++ 
Sbjct: 4   SLLGRTARGALNVTKATSSSLSRRCASSSAARFDWQDPLNAANLYTPEELAIAETARQYC 63

Query: 96  KVEFHP----AW------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           +    P    A+        +L+     GL  +  +      V   A  +    +  +  
Sbjct: 64  QERLMPRVLEAYRNEDYDKTMLQEMGELGLLGATIEGYGCAGVSTVASGLITKEVERVDS 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   S    + +    T  + + + P +              K  +    GLTE 
Sbjct: 124 GFRSGMSVQSSLIMTGIHEFGTKELKEKYLPGL-------------AKGKLIGCFGLTEP 170

Query: 206 RGGTDIAAITSQGQ--KISDGIYCLSG-HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPR 260
             G+D  ++ +  +      G Y L+G   W  +SP+SD F++ A++E  G++  F+V R
Sbjct: 171 NHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIKGFIVQR 230

Query: 261 LLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              D  P G L    +KNK   R++ T  ++  N        L    G V        L+
Sbjct: 231 ---DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLV---GPFTCLN 284

Query: 320 SAIMSVS-----GMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALS 373
           SA + ++      +   +  A  Y+  R    G  L    ++++ +AD A D A  T  +
Sbjct: 285 SARLGIAFGTMGALEDCIDRARTYSIERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAA 344

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A   DE K   E       M  +TK   C  A        E  GG+   +E  I RH
Sbjct: 345 VQVARLKDEGKCTPE-------MISMTKRQNCDRALVGARTLQEVFGGNAASDEYHIGRH 397

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
                      G  +   L +   +
Sbjct: 398 VANLFVAQTYEGQSDIHSLILGRAI 422


>gi|33595290|ref|NP_882933.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565367|emb|CAE36170.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 117/360 (32%), Gaps = 32/360 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGH 150
              DK    P  H         G                        R+        A  
Sbjct: 29  REKDKKHEFP--HEFFEAVASGGWLGICMPEEVGGANLGVTEAALFMRVVAECGGQAAAS 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  ++     V    T    + W P     E+                  +TE   G D
Sbjct: 87  SIHMNIFGLQPVVHFATQAQKQAWLPPFGRGEHK-------------ACFAVTEPDPGLD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRLLEDG 265
              + +  +K  DG Y ++G K F+ ++ ++D  ++LA+       +     +       
Sbjct: 134 TTKLKTVARKQPDGSYLITGKKVFISTAQVADHMLILARTTPIEEVKKHSEGLSLFYTKL 193

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             N +  + + +K+G  +  T EL   N       L+G+       +        +  A 
Sbjct: 194 DRNYVDIREI-DKLGRGAVDTNELFIDNLPVAKDALIGEEGKGLSYIFHGMNAERVLVAA 252

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   R  L  A  YA+ R V G  +     ++  +A    ++ AA  +    A+ +D 
Sbjct: 253 EQVGMGRAVLKLATQYAKERVVFGRPIGKNQGIQHPLARSWAELEAANHMMLAAADLYDR 312

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +S   EA  A+++A       C+        ++   GG GY +E  + R  RE+    I
Sbjct: 313 GESCGSEANAAKLLASEACMQACQ-------NSILTHGGYGYAKEYHVERFMREAWIGYI 365


>gi|163853663|ref|YP_001641706.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665268|gb|ABY32635.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens
           PA1]
          Length = 408

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 137/394 (34%), Gaps = 45/394 (11%)

Query: 103 WHALLRRSIHDGLHCSIWD--RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           W    R ++         D        +  Q  ++  + +  MAQ     +  P+     
Sbjct: 18  WRTDRRAALQQEARAFARDVILPLADELDPQKGEMPRSLIDAMAQKGWFGITIPAEYGGM 77

Query: 161 MVALM----TTPRVHKDWAP-------------KIFSREYDPTNKAPMQKTSVAIGLGLT 203
            + +      +  + + W               +    E      A   K      + L+
Sbjct: 78  GLGVFEYCLISEELARAWLSTGSILARGQGLGTQTLDDESRRALLAKSAKGQWIGSIALS 137

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVP 259
           E   G+D+A + ++  +  D        +W   +  +D   +LA+V     G      + 
Sbjct: 138 EPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGADFIEVLARVRDPEPGEPRSAGLE 197

Query: 260 RLLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL------------NV 304
             L    P          + +KIG     T EL            L            + 
Sbjct: 198 PFLVVKEPGTFPKGMTGTVIDKIGYHGFLTFELNLDGVRVPERDRLTGLYGDEGADADSG 257

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V+    +  + +A  +V   R ++ +   Y + R   G  +     ++ A+AD+A 
Sbjct: 258 GFASVQRGLNIARVHTAARAVGVARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAA 317

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++A A A   ++A+  DE      E+A  +++A        +MA  V  +AM+  GG+GY
Sbjct: 318 EVAQARAYWQQVAHLLDEGLPAESESAQVKLLA-------TEMAVRVTNQAMQLHGGNGY 370

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ER + R++R++   +I  G+       + + +
Sbjct: 371 TTERRVERYWRDARLTTIFEGTSEIQRRIISDRM 404


>gi|238062005|ref|ZP_04606714.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237883816|gb|EEP72644.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 618

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 93/546 (17%), Positives = 187/546 (34%), Gaps = 118/546 (21%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA--------NYNTPQ 83
           +  N +     +      F    + +L++            LAR          + N P 
Sbjct: 11  VEFNLFE----VFGADRAFGQEPYSDLDVDTARSFLAEVDRLAREDLAVSYSDSDRNPPV 66

Query: 84  LHAYGPGGERWDKVEFHPAWHAL-----LRRSIHDGLHCSIWDRSFEPVV----RKQAHK 134
                          F PA H        ++S    +    W     P +      +A  
Sbjct: 67  ---------------FDPATHTAPLPESFKKSYQAFMDSEFWRLDLPPALDGTNAPRALW 111

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
              A L L A        S    +  +    T     K WA     +++  T        
Sbjct: 112 WSLAELVLGANAPVWMYASGPSFAHVLHVEGT--EQQKKWAKLFIDKQWGST-------- 161

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249
                + LTE   G+D+ A  ++     DG + + G K F++S   D        +LA+ 
Sbjct: 162 -----MVLTEPDAGSDVGAGRTRAIPQPDGSWHIEGVKRFITSGEHDLSDNIVHYVLARP 216

Query: 250 ----------EGRVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                        +  F+VP+   D      G  NG+    +++K+G + + T E+ F  
Sbjct: 217 VGVEGVGGPGTKGLSLFVVPKFHFDAETGELGERNGVYATNVEHKMGIKVSNTCEMTFGE 276

Query: 294 ----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347
                 G+LLG+ +     +  +     +     +++ +      A+ YA+ R       
Sbjct: 277 HGVPAKGWLLGEKHDGIRQMFMIIEYARMMVGTKAIATLSTGYLNALEYAKNRVQGADLI 336

Query: 348 ----------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAA--- 391
                      +   P ++R++           AL    A+  D+   A++  +E A   
Sbjct: 337 QQADKTAPRVTITHHPDVRRSLMLQKSYAEGLRALVCYTASWQDQVAIAEAAGDERATKI 396

Query: 392 ---YARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                 ++ P+ K    + A  ++  EA++  GGSG++++  + ++ R++  +++  G+ 
Sbjct: 397 AKRVNDLLLPLVKGVGSERAYEMLGHEALQTFGGSGFLQDYPLEQYVRDAKIDTLYEGTT 456

Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-------SLCKEDKGL 500
               LD++             F  + +D G +   V   +++ I        L +E + L
Sbjct: 457 AIQSLDLI-------------FRKIARDNGKALTTVAGEIQEFITSEGGNGQLKQERQAL 503

Query: 501 ARFLTE 506
            + L E
Sbjct: 504 GKALAE 509


>gi|226327351|ref|ZP_03802869.1| hypothetical protein PROPEN_01219 [Proteus penneri ATCC 35198]
 gi|225204569|gb|EEG86923.1| hypothetical protein PROPEN_01219 [Proteus penneri ATCC 35198]
          Length = 380

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 131/365 (35%), Gaps = 18/365 (4%)

Query: 101 PAWHALLRRS--IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            A+ A   R     +    ++ D   + ++  + H    A    +A +     M      
Sbjct: 26  EAYFAECDRESKYPERFVKALADMEIDNLLIPEEHGGLNAGFVTVAAI----WMELGRLG 81

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A    L   P        +  ++E      A            +TE   G+D+ ++ +  
Sbjct: 82  APTYVLYQLPGGFNTVL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTY 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + +  +Y      +  SS  +   +++++        +      D S  G+   +L+ K
Sbjct: 141 TRKNGKVYLNGSKCFITSSAYTPYIVVMSRDSASPDKPIFTEWFVDMSKPGIKVNKLE-K 199

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R ++  E+ F N       + G        V++         A+ +      +  +A
Sbjct: 200 LGLRMDSCCEITFDNVELEEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  +    +++   A +A+ + +   + +  A   D     S +AA    
Sbjct: 260 ARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMRNMLYETAWKSDNNLITSGDAAM--- 316

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KY+C   A  V+  AM+ +GG G   E  I+R +R+   + +  GS    +L + 
Sbjct: 317 ----CKYFCANAAFEVVDSAMQVLGGVGIAGEHRISRFWRDLRVDRVSGGSDEMQILTLG 372

Query: 456 NLLEK 460
             + K
Sbjct: 373 RSVLK 377


>gi|323959988|gb|EGB55634.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H489]
          Length = 380

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|56709185|ref|YP_165230.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
 gi|56680870|gb|AAV97535.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
          Length = 380

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 107/315 (33%), Gaps = 30/315 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        ++L  TP    +W P   S                     LTE + 
Sbjct: 84  ADFAFAMQGLGTGAISLFGTPEQQAEWLPLTRSG-------------QAIAAFALTEPQS 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+A  T       D         W  +  ++D + ++A+     G   +   +     
Sbjct: 131 GSDVANSTMTATADGDDYVLNGEKTWISNGGIADVYTLIARTGEAPGARGLSAFVLPAGL 190

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSA 321
            G         +         L F++          +   P E  K+ +          A
Sbjct: 191 PGFEVVERLEVMAPH--PLARLRFTDVRVPKSA---LLGAPGEGFKVAMAVLDVFRSTVA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R +L E++     R V G  L D  +++  IAD+ALD+ A+  L++R A + D
Sbjct: 246 AAALGFARRALDESLARVTTRQVQGAPLFDLQMVQGHIADMALDVDASALLTYRAAWAKD 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R          A + K +    A  VI +A++  GG G      +   YR+  A  
Sbjct: 306 MGAPR------VSREAAMAKLYSTDHAQQVIDKAVQLFGGDGVRRGEKVEELYRDIRALR 359

Query: 442 ILLGSGNAMVLDVLN 456
           I  G+ +   + +  
Sbjct: 360 IYEGASDVQRVVIAR 374


>gi|323964862|gb|EGB60329.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           M863]
 gi|327255015|gb|EGE66618.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           STEC_7v]
          Length = 380

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|88703924|ref|ZP_01101639.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
 gi|88701751|gb|EAQ98855.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71]
          Length = 421

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 118/393 (30%), Gaps = 36/393 (9%)

Query: 83  QLHAYGPGGERWDKVE---FHPAWHALLRRS----IHDGLHCSIWDRSFEPVVRKQAHKI 135
           +   +     R D       +  W ALLR++    I  G+    + + F           
Sbjct: 35  RFFDHRREDARTDWERDGLPNEEWEALLRKAKDLAIEAGIFNYPFPKEFGGREGGNLGMA 94

Query: 136 ------RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                  A  L L   L+  H +  +  +  ++    T      W   + S         
Sbjct: 95  LIREHLAAKGLGLHNDLQNEHSIVGNNIALLLMLHYGTDAQKAQWLEGMAS--------- 145

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                      G+TE   G+D   + +   +  D         W     ++DA +++A+ 
Sbjct: 146 ----ARQGFAFGITEPEHGSDATHMETAAVRDGDHWVINGEKTWNTGVHIADADMVMART 201

Query: 250 EGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
            G+ G    +   L      G+  +       N  +    + F++       + G     
Sbjct: 202 SGQPGEAAGITAFLVPMETPGVKIEEYLWTF-NMPSDHARVSFADVRVPHSAIFGGEGKG 260

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              ++       +  A  S+   +  + EA+ +AR R   G  L     ++  + ++   
Sbjct: 261 LMVIQHFFNENRIRQAASSLGAAQYCVNEAVAHARERKPFGKALASNQAIQFPLVELNAR 320

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                AL  + A   D   + S           +  Y   ++       AM+  GG GY 
Sbjct: 321 CEMLRALIHKTAWLMDRDGAFS-----VSDKVSMCNYQANRLCCEAADFAMQVHGGMGYS 375

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +     YR      I  G+    +      L
Sbjct: 376 RYKPFEHIYRHHRRYRITEGADEIQIRRAAGYL 408


>gi|323945776|gb|EGB41823.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H120]
          Length = 380

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGMDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|15799722|ref|NP_285734.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 EDL933]
 gi|15829296|ref|NP_308069.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128033|ref|NP_414581.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|24111485|ref|NP_705995.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2a str. 301]
 gi|26245963|ref|NP_752002.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|30061607|ref|NP_835778.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2a str. 2457T]
 gi|74310659|ref|YP_309078.1| crotonobetainyl-CoA dehydrogenase [Shigella sonnei Ss046]
 gi|82775441|ref|YP_401788.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae Sd197]
 gi|89106923|ref|AP_000703.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. W3110]
 gi|91209100|ref|YP_539086.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UTI89]
 gi|117622330|ref|YP_851243.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|157156236|ref|YP_001461209.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|157159508|ref|YP_001456826.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli HS]
 gi|168751704|ref|ZP_02776726.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168756866|ref|ZP_02781873.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762802|ref|ZP_02787809.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766730|ref|ZP_02791737.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776958|ref|ZP_02801965.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781739|ref|ZP_02806746.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785093|ref|ZP_02810100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC869]
 gi|168801923|ref|ZP_02826930.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC508]
 gi|170021603|ref|YP_001726557.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ATCC 8739]
 gi|170079702|ref|YP_001729022.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170680462|ref|YP_001742157.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|188492842|ref|ZP_03000112.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 53638]
 gi|191169683|ref|ZP_03031374.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|193066226|ref|ZP_03047279.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E22]
 gi|193070977|ref|ZP_03051906.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194429857|ref|ZP_03062369.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B171]
 gi|194439678|ref|ZP_03071748.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|195937713|ref|ZP_03083095.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808746|ref|ZP_03251083.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812666|ref|ZP_03253995.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821852|ref|ZP_03262172.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399530|ref|YP_002268647.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917231|ref|YP_002291315.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SE11]
 gi|215485201|ref|YP_002327632.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217325339|ref|ZP_03441423.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14588]
 gi|218547486|ref|YP_002381277.1| crotonobetainyl-CoA dehydrogenase [Escherichia fergusonii ATCC
           35469]
 gi|218556979|ref|YP_002389892.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli S88]
 gi|218687915|ref|YP_002396127.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|218693511|ref|YP_002401178.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|218698459|ref|YP_002406088.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IAI39]
 gi|218703300|ref|YP_002410819.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UMN026]
 gi|227885062|ref|ZP_04002867.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 83972]
 gi|237704183|ref|ZP_04534664.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|238899444|ref|YP_002925240.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BW2952]
 gi|253774929|ref|YP_003037760.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037456|ref|ZP_04871533.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|254160164|ref|YP_003043272.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B str. REL606]
 gi|254791176|ref|YP_003076013.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256020121|ref|ZP_05433986.1| crotonobetainyl-CoA dehydrogenase [Shigella sp. D9]
 gi|256025356|ref|ZP_05439221.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 4_1_40B]
 gi|260842277|ref|YP_003220055.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|260853250|ref|YP_003227141.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|260866190|ref|YP_003232592.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O111:H- str. 11128]
 gi|261226797|ref|ZP_05941078.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255200|ref|ZP_05947733.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291280863|ref|YP_003497681.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403113|ref|ZP_06647210.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|293408132|ref|ZP_06651972.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B354]
 gi|293417915|ref|ZP_06660537.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B185]
 gi|297519862|ref|ZP_06938248.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli OP50]
 gi|298378641|ref|ZP_06988525.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|300816074|ref|ZP_07096297.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 107-1]
 gi|300821956|ref|ZP_07102100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 119-7]
 gi|300900938|ref|ZP_07119073.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 198-1]
 gi|300905442|ref|ZP_07123209.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 84-1]
 gi|300919590|ref|ZP_07136082.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 115-1]
 gi|300924012|ref|ZP_07140012.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 182-1]
 gi|300928662|ref|ZP_07144181.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 187-1]
 gi|300939452|ref|ZP_07154114.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 21-1]
 gi|300948643|ref|ZP_07162727.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 116-1]
 gi|300956969|ref|ZP_07169221.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 175-1]
 gi|300981012|ref|ZP_07175289.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 45-1]
 gi|301019773|ref|ZP_07183919.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 69-1]
 gi|301024784|ref|ZP_07188422.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 196-1]
 gi|301048422|ref|ZP_07195449.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 185-1]
 gi|301305070|ref|ZP_07211171.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 124-1]
 gi|301330191|ref|ZP_07222853.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 78-1]
 gi|306815363|ref|ZP_07449512.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|307136642|ref|ZP_07495998.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli H736]
 gi|307311507|ref|ZP_07591149.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|309787306|ref|ZP_07681918.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|309796022|ref|ZP_07690434.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 145-7]
 gi|312970133|ref|ZP_07784315.1| acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|331640489|ref|ZP_08341637.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H736]
 gi|331645146|ref|ZP_08346257.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M605]
 gi|331650931|ref|ZP_08351959.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M718]
 gi|331661078|ref|ZP_08362010.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA206]
 gi|331661406|ref|ZP_08362330.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA143]
 gi|331666273|ref|ZP_08367154.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA271]
 gi|331680610|ref|ZP_08381269.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H591]
 gi|331681423|ref|ZP_08382060.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H299]
 gi|332281274|ref|ZP_08393687.1| crotonobetaine reductase subunit II FAD-binding [Shigella sp. D9]
 gi|45593149|sp|P60584|CAIA_ECOLI RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593150|sp|P60585|CAIA_ECOL6 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593151|sp|P60586|CAIA_ECO57 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|45593152|sp|P60587|CAIA_SHIFL RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|122990881|sp|Q1RGF9|CAIA_ECOUT RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|123746061|sp|Q3Z5W9|CAIA_SHISS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|123755798|sp|Q32K58|CAIA_SHIDS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991430|sp|A7ZHD0|CAIA_ECO24 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991431|sp|A7ZVY9|CAIA_ECOHS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|166991432|sp|A1A789|CAIA_ECOK1 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|189081541|sp|B1IRD7|CAIA_ECOLC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699660|sp|B7MAG2|CAIA_ECO45 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699661|sp|B5YYD3|CAIA_ECO5E RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699662|sp|B7NHE3|CAIA_ECO7I RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699664|sp|B1XBG4|CAIA_ECODH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699665|sp|B7N7R4|CAIA_ECOLU RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699666|sp|B6HYZ0|CAIA_ECOSE RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699667|sp|B1LFX2|CAIA_ECOSM RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699668|sp|B7LWN0|CAIA_ESCF3 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813523|sp|B7UI85|CAIA_ECO27 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813524|sp|B7L4G2|CAIA_ECO55 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813525|sp|B7MNP6|CAIA_ECO81 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|259585573|sp|C4ZPW5|CAIA_ECOBW RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|12512726|gb|AAG54342.1|AE005180_9 probable carnitine operon oxidoreductase [Escherichia coli O157:H7
           str. EDL933]
 gi|26106360|gb|AAN78546.1|AE016755_46 Crotonobetainyl-CoA dehydrogenase [Escherichia coli CFT073]
 gi|563862|emb|CAA52111.1| caiA [Escherichia coli]
 gi|1786223|gb|AAC73150.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13359498|dbj|BAB33465.1| putative carnitine operon oxidoreductase [Escherichia coli O157:H7
           str. Sakai]
 gi|24050237|gb|AAN41702.1| probable carnitine operon oxidoreductase [Shigella flexneri 2a str.
           301]
 gi|30039849|gb|AAP15583.1| probable carnitine operon oxidoreductase [Shigella flexneri 2a str.
           2457T]
 gi|73854136|gb|AAZ86843.1| probable carnitine operon oxidoreductase [Shigella sonnei Ss046]
 gi|81239589|gb|ABB60299.1| probable carnitine operon oxidoreductase [Shigella dysenteriae
           Sd197]
 gi|85674294|dbj|BAB96608.2| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K12 substr. W3110]
 gi|91070674|gb|ABE05555.1| probable carnitine operon oxidoreductase [Escherichia coli UTI89]
 gi|115511454|gb|ABI99528.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|157065188|gb|ABV04443.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli HS]
 gi|157078266|gb|ABV17974.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E24377A]
 gi|169756531|gb|ACA79230.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739]
 gi|169887537|gb|ACB01244.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170518180|gb|ACB16358.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli SMS-3-5]
 gi|187767723|gb|EDU31567.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014289|gb|EDU52411.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488041|gb|EDU63144.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 53638]
 gi|189000668|gb|EDU69654.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356074|gb|EDU74493.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364115|gb|EDU82534.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366991|gb|EDU85407.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374798|gb|EDU93214.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376006|gb|EDU94422.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC508]
 gi|190900276|gb|EDV60134.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B7A]
 gi|192926151|gb|EDV80792.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E22]
 gi|192955707|gb|EDV86181.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli E110019]
 gi|194412076|gb|EDX28386.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B171]
 gi|194421363|gb|EDX37380.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 101-1]
 gi|208728547|gb|EDZ78148.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733943|gb|EDZ82630.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741975|gb|EDZ89657.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160930|gb|ACI38363.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747004|gb|ACI71809.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747006|gb|ACI71810.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747008|gb|ACI71811.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747010|gb|ACI71812.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209747012|gb|ACI71813.1| putative carnitine operon oxidoreductase [Escherichia coli]
 gi|209910490|dbj|BAG75564.1| putative carnitine operon oxidoreductase [Escherichia coli SE11]
 gi|215263273|emb|CAS07588.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217321560|gb|EEC29984.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350243|emb|CAU95926.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           55989]
 gi|218355027|emb|CAQ87633.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia
           fergusonii ATCC 35469]
 gi|218363748|emb|CAR01408.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           S88]
 gi|218368445|emb|CAR16181.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           IAI39]
 gi|218425479|emb|CAR06261.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           ED1a]
 gi|218430397|emb|CAR11264.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           UMN026]
 gi|222031871|emb|CAP74609.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli LF82]
 gi|226840562|gb|EEH72564.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 1_1_43]
 gi|226902095|gb|EEH88354.1| crotonobetainyl-CoA dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|227837891|gb|EEJ48357.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 83972]
 gi|238860673|gb|ACR62671.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BW2952]
 gi|242375878|emb|CAQ30559.1| predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253325973|gb|ACT30575.1| acyl-CoA dehydrogenase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972065|gb|ACT37736.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           B str. REL606]
 gi|253976274|gb|ACT41944.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           BL21(DE3)]
 gi|254590576|gb|ACT69937.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O157:H7 str. TW14359]
 gi|257751899|dbj|BAI23401.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|257757424|dbj|BAI28921.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|257762546|dbj|BAI34041.1| crotonobetaine reductase subunit II, FAD-binding [Escherichia coli
           O111:H- str. 11128]
 gi|260450752|gb|ACX41174.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1]
 gi|281177254|dbj|BAI53584.1| putative carnitine operon oxidoreductase [Escherichia coli SE15]
 gi|284919820|emb|CBG32875.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 042]
 gi|290760736|gb|ADD54697.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291430028|gb|EFF03042.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1412]
 gi|291430633|gb|EFF03631.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B185]
 gi|291472383|gb|EFF14865.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli B354]
 gi|294490605|gb|ADE89361.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli IHE3034]
 gi|298280975|gb|EFI22476.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli FVEC1302]
 gi|299880274|gb|EFI88485.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 196-1]
 gi|300299715|gb|EFJ56100.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 185-1]
 gi|300316259|gb|EFJ66043.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 175-1]
 gi|300355601|gb|EFJ71471.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 198-1]
 gi|300399110|gb|EFJ82648.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 69-1]
 gi|300402720|gb|EFJ86258.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 84-1]
 gi|300409048|gb|EFJ92586.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 45-1]
 gi|300413336|gb|EFJ96646.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 115-1]
 gi|300419736|gb|EFK03047.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 182-1]
 gi|300451869|gb|EFK15489.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 116-1]
 gi|300455673|gb|EFK19166.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 21-1]
 gi|300463331|gb|EFK26824.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 187-1]
 gi|300525556|gb|EFK46625.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 119-7]
 gi|300531281|gb|EFK52343.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 107-1]
 gi|300839677|gb|EFK67437.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 124-1]
 gi|300843831|gb|EFK71591.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 78-1]
 gi|305851025|gb|EFM51480.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli NC101]
 gi|306908486|gb|EFN38984.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W]
 gi|307551884|gb|ADN44659.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ABU 83972]
 gi|307629612|gb|ADN73916.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli UM146]
 gi|308120264|gb|EFO57526.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 145-7]
 gi|308924884|gb|EFP70379.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 1617]
 gi|309700252|emb|CBI99540.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli ETEC H10407]
 gi|310337631|gb|EFQ02742.1| acyl-CoA dehydrogenase [Escherichia coli 1827-70]
 gi|312944645|gb|ADR25472.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313646584|gb|EFS11045.1| putative tail fiber protein [Shigella flexneri 2a str. 2457T]
 gi|315059265|gb|ADT73592.1| crotonobetaine reductase subunit II, FAD-binding protein
           [Escherichia coli W]
 gi|315134735|dbj|BAJ41894.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli DH1]
 gi|315255686|gb|EFU35654.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 85-1]
 gi|315285135|gb|EFU44580.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 110-3]
 gi|315293387|gb|EFU52739.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 153-1]
 gi|315298443|gb|EFU57698.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 16-3]
 gi|315616184|gb|EFU96803.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           3431]
 gi|320190440|gb|EFW65090.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320197517|gb|EFW72131.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli WV_060327]
 gi|320200443|gb|EFW75029.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli EC4100B]
 gi|320642079|gb|EFX11430.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647442|gb|EFX16237.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H- str.
           493-89]
 gi|320652776|gb|EFX21014.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H- str. H
           2687]
 gi|320658165|gb|EFX25894.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320663474|gb|EFX30758.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668786|gb|EFX35581.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323157901|gb|EFZ44004.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           EPECa14]
 gi|323160042|gb|EFZ46005.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           E128010]
 gi|323166090|gb|EFZ51869.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella sonnei
           53G]
 gi|323171459|gb|EFZ57106.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           LT-68]
 gi|323176346|gb|EFZ61938.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1180]
 gi|323181736|gb|EFZ67149.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           1357]
 gi|323190280|gb|EFZ75556.1| acyl-CoA dehydrogenase, N-terminal domain protein [Escherichia coli
           RN587/1]
 gi|323380178|gb|ADX52446.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           KO11]
 gi|323935092|gb|EGB31459.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1520]
 gi|323939739|gb|EGB35941.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E482]
 gi|323950962|gb|EGB46839.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H252]
 gi|323955236|gb|EGB51009.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           H263]
 gi|323970713|gb|EGB65967.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TA007]
 gi|323975793|gb|EGB70889.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           TW10509]
 gi|324008384|gb|EGB77603.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 57-2]
 gi|324017693|gb|EGB86912.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 117-3]
 gi|324112560|gb|EGC06537.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia
           fergusonii B253]
 gi|324118391|gb|EGC12285.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli
           E1167]
 gi|326345243|gb|EGD68986.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           1125]
 gi|326346904|gb|EGD70638.1| Crotonobetainyl-CoA dehydrogenase [Escherichia coli O157:H7 str.
           1044]
 gi|330909889|gb|EGH38399.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli AA86]
 gi|331040235|gb|EGI12442.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H736]
 gi|331045903|gb|EGI18022.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M605]
 gi|331051385|gb|EGI23434.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli M718]
 gi|331052120|gb|EGI24159.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA206]
 gi|331061321|gb|EGI33284.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA143]
 gi|331066484|gb|EGI38361.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli TA271]
 gi|331072073|gb|EGI43409.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H591]
 gi|331081644|gb|EGI52805.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Escherichia coli H299]
 gi|332103626|gb|EGJ06972.1| crotonobetaine reductase subunit II FAD-binding [Shigella sp. D9]
 gi|332341371|gb|AEE54705.1| crotonobetainyl-CoA dehydrogenase CaiA [Escherichia coli UMNK88]
 gi|332762351|gb|EGJ92618.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 2747-71]
 gi|332762598|gb|EGJ92863.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 4343-70]
 gi|332764880|gb|EGJ95108.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-671]
 gi|332768826|gb|EGJ99005.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri 2930-71]
 gi|333009194|gb|EGK28650.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-218]
 gi|333010530|gb|EGK29963.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri VA-6]
 gi|333011421|gb|EGK30835.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-272]
 gi|333021660|gb|EGK40909.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-227]
 gi|333022452|gb|EGK41690.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           flexneri K-304]
          Length = 380

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|110804106|ref|YP_687626.1| crotonobetainyl-CoA dehydrogenase [Shigella flexneri 5 str. 8401]
 gi|123048484|sp|Q0T8F5|CAIA_SHIF8 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|110613654|gb|ABF02321.1| probable carnitine operon oxidoreductase [Shigella flexneri 5 str.
           8401]
          Length = 380

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNSVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|296392632|ref|YP_003657516.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296179779|gb|ADG96685.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 611

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 93/521 (17%), Positives = 196/521 (37%), Gaps = 81/521 (15%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--MAN------YNTPQ 83
           I  N +     L  L     S  + +L++     +    ++LA   +A+       N P 
Sbjct: 11  IEFNLFE----LFGLEETLASGDYGDLDVDAVKDILRETRKLAEGPLADTWVGPDRNPPV 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              +        ++E        L      G            +   +A       L + 
Sbjct: 67  ---FDSEKH---EIELPKEIAKALDLLYDSGALQVALPEEIGGIPAPRALTWALTELLVG 120

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           +             +A + AL T  +  K W+  I  +++  T             + LT
Sbjct: 121 SHAAVYFYAIGPAFTAILYALGTDEQ--KQWSKVIAEQKWGAT-------------MVLT 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEG------ 251
           E   G+D+ A T++  +  DG + + G K F++S  S  +      ++LA+ EG      
Sbjct: 166 EPDAGSDVGAGTTKAVEQPDGTWHIEGVKRFITSATSGDYFDNIFHLVLARPEGARAGTK 225

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD 301
            +  F VP+   D      G  NG+    +++K+G +++AT EL F        G+L+G 
Sbjct: 226 GLSLFFVPKWHYDFEKRERGERNGVFVTGVEHKMGIKASATCELTFGQHGKPAVGWLVGG 285

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGG---------IL 349
           ++     + D+     +   I S++ +  +   A+ +A+ R                  +
Sbjct: 286 VHDGIAQMFDVIENARMLIGIKSIATLSTAYLNALEFAKERVQGSDFTQMLNKDAPRVTI 345

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYAR----IMAPITKY 402
           +  P ++R++ +         AL    A   D A   +    +   A      + PI K 
Sbjct: 346 MRHPEVRRSLLEQKAYAEGLRALYLLAAAYQDPAVAQRLFGADEDLAYRVNDFLLPIVKG 405

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           +  +   A +A++++  GGSG++++  I ++ R++  +++  G+     LD     ++  
Sbjct: 406 FGSEQGYAHLADSLQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQSLDFFFRKIVRD 465

Query: 461 GTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLCKE 496
            T     +   +++ + SS      K+   +LR ++   + 
Sbjct: 466 QTAALNHITGQIQEFVDSSAGNGRLKEARELLRAALGDFQA 506


>gi|218532519|ref|YP_002423335.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|254563597|ref|YP_003070692.1| short-chain specific acyl-CoA dehydrogenase [Methylobacterium
           extorquens DM4]
 gi|218524822|gb|ACK85407.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           chloromethanicum CM4]
 gi|254270875|emb|CAX26880.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens DM4]
          Length = 408

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 139/394 (35%), Gaps = 45/394 (11%)

Query: 103 WHALLRRSIHDGLHCSIWD--RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           W    R ++ +       D        +  Q  ++  + +  MAQ     +  P+     
Sbjct: 18  WRTDRRAALQEEARAFARDVILPLADELDPQKGEMPRSLIDAMAQKGWFGITIPAEYGGM 77

Query: 161 MVALM----TTPRVHKDWAP-------------KIFSREYDPTNKAPMQKTSVAIGLGLT 203
            + +      +  + + W               +    E      A   K      + L+
Sbjct: 78  GLGVFEYCLISEELARAWLSTGSILARGQGLGTQTLDDESRRALLAKSAKGQWIGSIALS 137

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVP 259
           E   G+D+A + ++  +  D        +W   +  +D   +LA+V     G      + 
Sbjct: 138 EPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGADFIEVLARVRDPEPGEPRSAGLE 197

Query: 260 RLLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL------------NV 304
             L    P          + +KIG     T EL+           L            + 
Sbjct: 198 PFLVVKEPGTFPKGMTGTVIDKIGYHGFLTFELKLDGVRVPERDRLTGLYGDEGADADSG 257

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V+    +  + +A  +V   R ++ +   Y + R   G  +     ++ A+AD+A 
Sbjct: 258 GFASVQRGLNIARVHTAARAVGVARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAA 317

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++A A A   ++A+  DE      E+A  +++A        +MA  V  +AM+  GG+GY
Sbjct: 318 EVAQARAYWQQVAHLLDEGLPAESESAQVKLLA-------TEMAVRVTNQAMQLHGGNGY 370

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ER + R++R++   +I  G+       + + +
Sbjct: 371 TTERRVERYWRDARLTTIFEGTSEIQRRIISDRM 404


>gi|58616602|ref|YP_195733.1| putative acyl-CoA dehydrogenase [Azoarcus sp. EbN1]
 gi|56316066|emb|CAI10709.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 386

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 118/358 (32%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R     GL   +     E    +    +R A  Y  A L+    M    T    + 
Sbjct: 45  RGIVRDLGDAGLLRYVVPEGSESYDLRSICLLREALTYEHALLDGMFAMQGIGTIG--IR 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + P               ++ +      LTE   G+D+A++ +   +  D
Sbjct: 103 QFGSEEQKERYLPGC-------------RRGTRVAAFALTEPEAGSDVASLATTATRDGD 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                       ++  +D ++++A+         +   + D    G+        I    
Sbjct: 150 HFIINGEKTLISNAGFADHYVVVARTGEAPRSRGLSAFIVDAETPGVSAGEQMEFIAKHP 209

Query: 284 NATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
             +  ++F++        L     G    M             +V   + ++ E +    
Sbjct: 210 GGS--IKFTDCRVPACAMLGAPGQGFTVAMAAFDIFRPSVGAAAVGLAQRAMHETLKRVT 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R + G  + +   ++  +AD+A DI  A    +R   S D      +  +YA  MA + 
Sbjct: 268 TRQLFGKPMCELQSVQMTLADMAADIDTAALTVYRAGWSHD---VLGKRGSYAPSMAKLV 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                + A  V+  A++  GG G  +   I + YRE+    I  G+       +   +
Sbjct: 325 ---GSEAAGRVVDRAVQLSGGMGVTQGNLIEQLYREARPMRIYEGASEVQKQIIARSM 379


>gi|312966159|ref|ZP_07780385.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
 gi|312289402|gb|EFR17296.1| putative acyl-CoA dehydrogenase [Escherichia coli 2362-75]
          Length = 380

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 128/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++        +A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLAALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|168700065|ref|ZP_02732342.1| Acyl-CoA dehydrogenase [Gemmata obscuriglobus UQM 2246]
          Length = 598

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 143/440 (32%), Gaps = 37/440 (8%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A E+A            +     R D+    P   A++R     GL+       +  +
Sbjct: 52  AAADEMAAKVRAYAESHIDH----MRIDREARIPD--AVVRGLADLGLYKLTIPAEYGGL 105

Query: 128 VRKQAHKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
              Q   ++   +        A  + +        + L  +      W P ++       
Sbjct: 106 GFGQQQYLKTMEVLGGHDASVAVFVNAHHSIGVRALCLFGSKEQQARWLPGLYDG----- 160

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFI 244
                   S      LTE   G+D   + +      DG  Y L+G K ++++  ++    
Sbjct: 161 --------SKLCAFALTEPEAGSDAGNVQTTATPTEDGSAYVLNGTKHYITNGGIAHVLT 212

Query: 245 MLAQVEGRVGCFL-VPRLLEDGSPNGLCY-QRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           ++A+          V   L      G    +    K G R  AT ++ F+N        L
Sbjct: 213 VMARTPDPSSPKGKVSAFLVTPDMPGFEVVEARAEKCGIRGTATGKIRFTNMRVPKENVL 272

Query: 303 NVSTGPVEDMKILIYLDSAIMSV---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                 ++    ++               +  +     +A++R      L +  ++++ +
Sbjct: 273 GQLGRGLQAALTVLNYGRVTFGATCTGHAKACIQAMTTHAKKRVQFQQSLAEFQLVQKKV 332

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A  A    A  A +   A   D             +   I K +  +    ++ + ++  
Sbjct: 333 AFAAAHCFAMEAATAECAAFIDRGAPD------YMLETAILKVFATEHLWTIVNDTLQVY 386

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           GG GY  ++ I R  R++  N+I  G+ + +   +  +  +G  ++ +      QD    
Sbjct: 387 GGKGYFCDQPIERWMRDARINTIGEGANDVLKAFIAVVGCRGPGVYLKGL----QDDMLG 442

Query: 480 GKKVITILRDSISLCKEDKG 499
           G+  +  L  S+ +  +   
Sbjct: 443 GRWSLRKLGQSLGVVGQLAA 462


>gi|328847744|gb|EGF97087.1| hypothetical protein MELLADRAFT_54358 [Melampsora larici-populina
           98AG31]
          Length = 378

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 117/344 (34%), Gaps = 39/344 (11%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  +  +       +   S      +    +    + + P++ S           
Sbjct: 63  AYGLLAREVERVDSGYRSAMSVQSSLVMHPINEFGSEEQKQRYLPELASGNM-------- 114

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQ 248
                    GLTE   G+D A + +   + +DG           W  +SP++D FI+ A+
Sbjct: 115 -----IGCFGLTEPSHGSDPAGMLTTAMEATDGSGGFVLNGSKTWITNSPIADVFIIWAK 169

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
              +G++  F++     +    GL   ++++K+  R++ T  +   +        L   T
Sbjct: 170 CKWDGKIRGFIL-----EKGMPGLSAPKIQHKLALRASTTGSIFMDSVPVPSGNVLPKVT 224

Query: 307 GPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G          L+SA + +       +   +  A  YA  R      L    ++++ + D
Sbjct: 225 GLK---GPFSCLNSARLGISFGVIGALEDCVKRAREYALDRVQFNRPLASFQLVQKKLVD 281

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +       S +L    D+     E       M  + K   C  A       ++ +GG
Sbjct: 282 ANTEAVLGLCASIQLGRLKDQGTWCPE-------MVSLLKRNNCGKALEHARILLDVLGG 334

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +   +E  I R        +   G+ +   L +L     G   F
Sbjct: 335 NAVSDEYHIGRIAANLQVANTYEGTHDIHAL-ILGKAMTGLQAF 377


>gi|301648394|ref|ZP_07248130.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 146-1]
 gi|301073529|gb|EFK88335.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 146-1]
          Length = 380

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 126/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G   ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLHMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|325677264|ref|ZP_08156930.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325551961|gb|EGD21657.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 414

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 123/367 (33%), Gaps = 36/367 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMT 166
             +   G   +  D          +  +          L     M  S+  +A  +    
Sbjct: 65  EEAKERGEAPADSDEKSGGFSGAGSMGVILNSEIAGVSLGLVASMGVSIGLTAGTLRSRG 124

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGI 225
           T    K W P + + E                   +TE   G+D    + S  ++  D  
Sbjct: 125 TLAQKKRWLPGLVTME-------------KVGAWAITEPDSGSDAFGGMKSYVRRDGDD- 170

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGC----FLVPRLLEDGSPNGLCYQRLKNKI 279
           Y L+G K F+++   +D  I+ A+++ G          V   + +    G        K+
Sbjct: 171 YILNGQKTFITNGPHADVTIVYAKLDEGDASVDRRDRKVLGFVLEKGMEGFTQSPPFKKM 230

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAIMSVSGMRVS 331
           G  S+ T EL F N        L               ++      +  A +++  +   
Sbjct: 231 GMNSSPTGELFFDNVRISKDRLLGETENPAKGDGKESAKESFAAERIGIASLALGIINEC 290

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              +I YA+ R + G  +    +++  +A++ +       + F      +     S   A
Sbjct: 291 QRLSIDYAKNRKLWGKEIAQFQLIQLKLAEMEVARLNVQNMLFNAIERSNSGSPLSLAEA 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  GS    V
Sbjct: 351 SAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYKVEQLARDAKSLMIYAGSNEIQV 404

Query: 452 LDVLNLL 458
             +   L
Sbjct: 405 THIAKGL 411


>gi|294632960|ref|ZP_06711519.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830741|gb|EFF89091.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 387

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 139/393 (35%), Gaps = 42/393 (10%)

Query: 57  ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           EL  L   ++  + +ELAR  +     L  +       DK   +P     ++     G  
Sbjct: 5   ELSDL--ELIRKSVRELARRFD-----LEYW----REKDKKHEYP--WEFVKAFADGGWL 51

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
            ++    +  +                  A +  G  +   V   + +    +  + +++
Sbjct: 52  GAMIPEEYGGLGLGVTESAVMMTEIAQSGAGMSGGSAIHFYVFPPAPILRYGSEEMKREY 111

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            PK+   E             + +  G+TE   G D + I ++ +KI  G        W 
Sbjct: 112 LPKLARGE-------------ILMAFGVTEPTAGVDTSRIRTRAEKIDGGWVVNGQKVWI 158

Query: 235 LSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
            ++  +   ++LA+   R        +     D +   +  + + +K+G  +  + EL  
Sbjct: 159 TNAQNAHKILLLARTSPRDENKPLDGMTLFFTDLNRERITVREI-DKLGRAAIDSNELFI 217

Query: 292 SNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N       ++G++      + D      +   +  +   R +L  A  YA  R V    
Sbjct: 218 DNLEVRDDEVVGEVGQGFRYLIDGLNPERIVVGMEGIGLGRCALELASKYANERVVFNRP 277

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           +     +   +AD  + + AA  +    A  FD  ++  +EAA A+ +   + +  C  A
Sbjct: 278 IGKNQAVAHPLADSWIRLEAAELVCLNAARLFDAEQNCGKEAAAAKFLGAESGFQACDRA 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  M+  GG  Y +E  + R +RE+    
Sbjct: 338 -------MQTHGGFAYAKEYHVERLWREARLLP 363


>gi|312141521|ref|YP_004008857.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890860|emb|CBH50179.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 414

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 123/367 (33%), Gaps = 36/367 (9%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMT 166
             +   G   +  D          +  +          L     M  S+  +A  +    
Sbjct: 65  EEAKERGEAPADSDEKSGGFSGAGSMGVILNSEIAGVSLGLVASMGVSIGLTAGTLRSRG 124

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGI 225
           T    K W P + + E                   +TE   G+D    + S  ++  D  
Sbjct: 125 TLAQKKRWLPGLVTME-------------KVGAWAITEPDSGSDAFGGMKSYVRRDGDD- 170

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGC----FLVPRLLEDGSPNGLCYQRLKNKI 279
           Y L+G K F+++   +D  I+ A+++ G          V   + +    G        K+
Sbjct: 171 YILNGQKTFITNGPYADVTIVYAKLDEGDASVDRRDRKVLGFVLEKGMEGFTQSPPFKKM 230

Query: 280 GNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAIMSVSGMRVS 331
           G  S+ T EL F N        L               ++      +  A +++  +   
Sbjct: 231 GMNSSPTGELFFDNVRISKDRLLGETENPAKGDGKESAKESFAAERIGIASLALGIINEC 290

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              +I YA+ R + G  +    +++  +A++ +       + F      +     S   A
Sbjct: 291 QRLSIDYAKNRKLWGKEIAQFQLIQLKLAEMEVARLNVQNMLFNAIERSNSGSPLSLAEA 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  GS    V
Sbjct: 351 SAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYKVEQLARDAKSLMIYAGSNEIQV 404

Query: 452 LDVLNLL 458
             +   L
Sbjct: 405 THIAKGL 411


>gi|323476742|gb|ADX81980.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           HVE10/4]
          Length = 371

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 163/382 (42%), Gaps = 51/382 (13%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           G + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ 
Sbjct: 23  GTKIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQG 80

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           E          +  M+ L    R  K++               PM K  +     LTE  
Sbjct: 81  EL---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPS 118

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLL 262
           GG+DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR  
Sbjct: 119 GGSDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG- 176

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
                N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L 
Sbjct: 177 -----NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLA 230

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            + +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N 
Sbjct: 231 ISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNK 290

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           FDE  K +    A  ++++ I       +A  ++  +++  GG GY +  +I R YR++ 
Sbjct: 291 FDENSKDKGVYVAMLKLLSAI-------IANEIVDISLQVFGGMGYAKGTTIERIYRDAR 343

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+       +   +E+
Sbjct: 344 LLRIGEGTDEVQRHIIAKYIER 365


>gi|184201925|ref|YP_001856132.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183582155|dbj|BAG30626.1| acyl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 389

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 128/356 (35%), Gaps = 33/356 (9%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
             R+   GL        +E +       +      ++ A   A  L         +  L 
Sbjct: 43  WNRAAEAGLLGLAVPERYEGMGLTDYRFRAVMDEEFVRAGHLALGLAFHLQDDWVLPHLL 102

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + W P I   E                 +  TE   G+D+  + ++  +  +
Sbjct: 103 AYGTDEQKQRWLPAILGGEM-------------VTSVAFTEPGAGSDLRGVRTRAVRDGE 149

Query: 224 GIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL-----VPRLLEDGSPNGLCYQRLKN 277
             Y L+G K F+ + +S DA ++LA+ +G              L+E     G    +  +
Sbjct: 150 E-YVLNGQKTFIGNGISGDAALVLARTDGGTSPRGNRDSFSLFLVEKKDHAGYTTGKQLD 208

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +++ T EL F +       L+G+       + +      L  A+ +++     L E
Sbjct: 209 KMGLQASDTAELFFDDVRVPAANLVGEEGRGLDQITEQLPQGRLGVAVAAMAVAEGVLGE 268

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + +   R+V G  ++D    +  +A+++  + A+ A        F+  +          
Sbjct: 269 TVEFVSTRNVFGERVLDFQNTQFELAELSAQLEASQAYVAHCVELFNRGQ-------LDL 321

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           I A   K         ++   ++  GG GYI E S+A+ Y      +I  G+   +
Sbjct: 322 IAASKIKLQATGTVKDLVDRCLQLHGGFGYILESSVAQAYTAVRLLTIFGGTDEIL 377


>gi|119192250|ref|XP_001246731.1| glutaryl-CoA dehydrogenase [Coccidioides immitis RS]
          Length = 429

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 90/445 (20%), Positives = 153/445 (34%), Gaps = 53/445 (11%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWD 95
           SLL        +V       L     S +A           AN  TP+  A      ++ 
Sbjct: 4   SLLGRTARGALNVTKATSSSLSRRCASSSAARFDWQDPLNAANLYTPEELAIAETARQYC 63

Query: 96  KVEFHP----AW------HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           +    P    A+        +L+     GL  +  +      V   A  +    +  +  
Sbjct: 64  QERLMPRVLEAYRNEDYDKTMLQEMGELGLLGATIEGYGCAGVSTVASGLITKEVERVDS 123

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                +   S    + +    T  + + + P +              K  +    GLTE 
Sbjct: 124 GFRSGMSVQSSLIMTGIHEFGTKELKEKYLPGL-------------AKGKLIGCFGLTEP 170

Query: 206 RGGTDIAAITSQGQ--KISDGIYCLSG-HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPR 260
             G+D  ++ +  +      G Y L+G   W  +SP+SD F++ A++E  G++  F+V R
Sbjct: 171 NHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIKGFIVQR 230

Query: 261 LLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319
              D  P G L    +KNK   R++ T  ++  N        L    G V        L+
Sbjct: 231 ---DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLV---GPFTCLN 284

Query: 320 SAIMSVS-----GMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALS 373
           SA + ++      +   +  A  Y+  R    G  L    ++++ +AD A D A  T  +
Sbjct: 285 SARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAA 344

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A   DE K   E       M  + K   C  A        E  GG+   +E  I RH
Sbjct: 345 VQVARLKDEGKCTPE-------MISMIKRQNCDRALVGARTLQEVFGGNAASDEYHIGRH 397

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
                      G  +   L +   +
Sbjct: 398 VANLFVAQTYEGQSDIHSLILGRAI 422


>gi|184201741|ref|YP_001855948.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183581971|dbj|BAG30442.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 419

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 124/367 (33%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           WD+ E++     L+RR     L     +    P + K A  + A  L       +     
Sbjct: 72  WDRGEYN---LDLVRRMGEMDLLRDGVEVPGMPPMSKMAAGLVAMELSRGDGSISTVSGV 128

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   +AL  +    + W P + +               +     LTE   G+D   
Sbjct: 129 QGGLAMRSIALCGSEEQKQRWLPDMATG-------------KLLGAFALTEPAHGSDSIG 175

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + S+   +  G       KW  +  M    ++ A+ +           +      G    
Sbjct: 176 LESRATPVEGGYILNGAKKWIGNGSMGGITVVWARSDEDGAVHG---FVVPQESEGYTGT 232

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            +K K+  R+    E+   N F      L  +    +   +L    +  A  +V   +  
Sbjct: 233 TMKAKLALRAIHQAEITLENVFVPTENVLPHAKNFRDTSAVLFATRIGVAWAAVGHAQAC 292

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+HYA +RH  G  L    +++  +  +  ++     L   +A        + E   
Sbjct: 293 YETAVHYAMQRHQFGRPLAASQIVQERLTRMLSELTQIQTLVMAMAR-------KEEAGT 345

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +   A + KY   + A  V   A + +GG+G + E  +ARH+ +  A     G+     
Sbjct: 346 LSGPQASLAKYTATRTARQVAMNARDLLGGNGILMENRVARHFADIEAIHTYEGTETVQA 405

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 406 LIIGKSI 412


>gi|221126227|ref|XP_002161167.1| PREDICTED: similar to Glutaryl-Coenzyme A dehydrogenase, partial
           [Hydra magnipapillata]
          Length = 266

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 99/270 (36%), Gaps = 15/270 (5%)

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVE 250
           K  +    GLTE   G+D A + +  + + +          +W  +SP++D FI+ A  E
Sbjct: 1   KGELVGCFGLTEPNFGSDPAGMATNAKYVPEKKCFILNGSKQWITNSPIADVFIIWANCE 60

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
            +     +   + +    GL    ++ K   R++ T  +   +        L   TG   
Sbjct: 61  DKE----IRGFILEKGMKGLTAPNIEGKFSLRASKTGSIFMEDVVVPEKNLLPYVTGLKG 116

Query: 311 DMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               L       A   +      L  A +Y   RH  G  L    ++++ +ADI  ++A 
Sbjct: 117 PFGCLTNARYGIAWGVLGAAEFCLHMARNYTLERHQFGRPLAQNQLIQKKLADILTEVAI 176

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
                 ++    D+ K        A  M  + K   C  A      A + +GG+G  +E 
Sbjct: 177 GLQSCLQVGRLMDKKKV-------APEMVSLIKRNSCGKALDAARLARDMLGGNGVSDEY 229

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + RH     A +   G+ +   L +   +
Sbjct: 230 HVIRHCMNLEAVNTYEGTHDIHALILGRQI 259


>gi|281599400|gb|ADA72384.1| Crotonobetainyl-CoA dehydrogenase [Shigella flexneri 2002017]
          Length = 380

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWDSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|262194426|ref|YP_003265635.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262077773|gb|ACY13742.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 411

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 99/304 (32%), Gaps = 28/304 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L++     A +++   + +  + W   +                 +     L+E   G+D
Sbjct: 86  LLTVHTMVAQVLSRWGSDQQRERWLRDL-------------ACGRLLGAFALSEPEIGSD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ ++  D         W     ++D F++ A+ + R   F V     D    GL
Sbjct: 133 AGGVQTRARRDGDTYVLDGCKMWITYGQLADLFLVFARCDDRPTAFFV-----DRRTPGL 187

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV----EDMKILIYLDSAIMSVS 326
             + +    G R++ T  L FS         +    G V               A  S+ 
Sbjct: 188 SIEPVHGMFGLRASMTARLSFSGCRIPSDQQVGPMGGGVSLIASYALDFGRFSVAWGSLG 247

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  L  +I +   R   G ++ +  +++R I ++   + +A       A   D     
Sbjct: 248 LAQACLDASILHTSERTQFGKLIKEHQLVRRLITEMMTRVESARLHCAEAARLRDAEDMN 307

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           +           + KY     A     +A++  G  G      + R+  ++    I+ GS
Sbjct: 308 A------AAATAMAKYVASTAATQCALDAIQLHGAHGCGPYTPLQRYLGDAKVGEIIEGS 361

Query: 447 GNAM 450
               
Sbjct: 362 NEIQ 365


>gi|91094295|ref|XP_971662.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum]
 gi|270014404|gb|EFA10852.1| hypothetical protein TcasGA2_TC001629 [Tribolium castaneum]
          Length = 418

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 118/311 (37%), Gaps = 36/311 (11%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    +++ PK+              K  +    GLTE   G+D +++
Sbjct: 127 SSLVMGAIYYFGSKEQKEEYLPKL-------------AKGEIIGCFGLTEPNHGSDPSSM 173

Query: 215 TSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLC 271
            ++ +   S   Y L+G K W  ++P++D  I+  +  +G++  FL+ R        GL 
Sbjct: 174 ETRAKFNSSSKTYTLNGSKTWITNAPLADVLIIWGKNDDGKIRGFLIDR---KKHGKGLD 230

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRV 330
             +++ K   R++ T  +            L      VE +K     L++A   ++   +
Sbjct: 231 TPKIQGKFSLRASTTGMILMDGVEIPESNILP----NVEGLKGPFSCLNNARYGIAWGAL 286

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE     A +Y   R   G  L    +M++  AD+  DI+       ++    D+   
Sbjct: 287 GAAESCLHIARNYTLERKQFGRPLAANQLMQKKFADMITDISLGLQGCLQVGRLMDKKLH 346

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
             E       M  + K      A  +   A + +GG+G  +E  I RH     + +   G
Sbjct: 347 TPE-------MISLLKRNNAGKALVIARVARDMLGGNGIHDEYHIIRHVMNLESVNTYEG 399

Query: 446 SGNAMVLDVLN 456
           + +   L +  
Sbjct: 400 THDIHALILGR 410


>gi|189191946|ref|XP_001932312.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187973918|gb|EDU41417.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 433

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 112/299 (37%), Gaps = 21/299 (7%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYC 227
           +      +  S+E        M K  +    GLTE   G+D  ++ +  +      G Y 
Sbjct: 139 LAMGGIEEFGSQELKERLLPKMAKGKLLGCFGLTEPNHGSDPGSMETVAKPHPTRKGYYS 198

Query: 228 LSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRS 283
           LSG K W  +SP++D  ++ A++E  G++  F+V R   D  P G L    +K+K G R+
Sbjct: 199 LSGSKTWITNSPIADVLLVWAKLESTGKIRGFIVER---DQCPPGTLETPPIKHKNGLRA 255

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           + T  ++          +  D+    GP   +        A  ++  +   +A    YA 
Sbjct: 256 SITGMIQLDECPVSEANMFPDVEGLKGPFSCL-NSARYGIAWGTIGALEDCIARTREYAL 314

Query: 341 RRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            R       +    ++++ +AD   D A     + ++    DE K+       A  M  +
Sbjct: 315 ERRQFTNNPIAKYQLVQKKLADATTDAAYGILAAHQVGRLKDEGKA-------APEMISM 367

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K   C  A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 368 IKRQNCDRALINARTLQEVFGGNAVSDEYGIGRHVANLFVTQTYEGQSDIHSLILGRAI 426


>gi|168702293|ref|ZP_02734570.1| acyl-CoA dehydrogenase domain protein [Gemmata obscuriglobus UQM
           2246]
          Length = 384

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 117/359 (32%), Gaps = 22/359 (6%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
            +    L        +           +A AR+                  A  +    +
Sbjct: 39  LAAKHDLLGMNVKPEYGGRGADAVSYFKALARIGREGTTVRTFFSGHLSIGAYPIQTWGS 98

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             + + + P                K    +  GLTE   G++   +TS  +K  D    
Sbjct: 99  EALKRKYLP-------------AAAKGEKILAFGLTEPDAGSNPREMTSTYEKRGDHYVL 145

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL--KNKIGNRSNA 285
                   +  ++ A +  A   G+VG   +   + D +  G   +      K+G  ++ 
Sbjct: 146 NGVKYLISNGGIAHAVVAFAYPAGQVGTGRISAFVVDTAAKGFEAESFAANAKMGMPTSN 205

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T   E  +       L+G+            +   L  A   +  +   LAEAI YA+ R
Sbjct: 206 TAMFEMHDVAVPAENLVGEEGDGFRVAMGTLVSGRLSVAAGCLGVIEDCLAEAIWYAKER 265

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---MAPI 399
              G  +    +++  IA I +D  A+ AL  R A + D + +   +   AR    +A  
Sbjct: 266 KQHGKEIARHQLVQDHIAHIEMDRVASDALLIRAAEAKDRSAASPGDKELARHADLLAAQ 325

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +    A      A++  GG G+       RH  +     I  G+   + L +   L
Sbjct: 326 AKLFATNAAWDAADRAVQVFGGRGWSTLYRPGRHLTDVRVCRIYEGTDEILKLKIAAAL 384


>gi|110640252|ref|YP_667980.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 536]
 gi|191174108|ref|ZP_03035622.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli F11]
 gi|300984179|ref|ZP_07176907.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 200-1]
 gi|123049524|sp|Q0TLV0|CAIA_ECOL5 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|110341844|gb|ABG68081.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli 536]
 gi|190905602|gb|EDV65227.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli F11]
 gi|300306709|gb|EFJ61229.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 200-1]
 gi|324012294|gb|EGB81513.1| crotonobetainyl-CoA dehydrogenase [Escherichia coli MS 60-1]
          Length = 380

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDCLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|240141087|ref|YP_002965567.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens AM1]
 gi|240011064|gb|ACS42290.1| putative Short-chain specific acyl-CoA dehydrogenase
           [Methylobacterium extorquens AM1]
          Length = 408

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 138/394 (35%), Gaps = 45/394 (11%)

Query: 103 WHALLRRSIHDGLHCSIWD--RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           W    R ++ +       D        +  Q  ++  + +  MA+     +  P+     
Sbjct: 18  WRTDRRAALQEEARAFARDVILPLADELDPQKGEMPRSLIDAMAEKGWFGITIPAEYGGM 77

Query: 161 MVALM----TTPRVHKDWAP-------------KIFSREYDPTNKAPMQKTSVAIGLGLT 203
            + +      +  + + W               +    E      A   K      + L+
Sbjct: 78  GLGVFEYCLISEELARAWLSTGSILARGQGLGTQTLDDESRRALLAKSAKGQWIGSIALS 137

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVP 259
           E   G+D+A + ++  +  D        +W   +  +D   +LA+V     G      + 
Sbjct: 138 EPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGADFIEVLARVRDPEPGEPRSAGLE 197

Query: 260 RLLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL------------NV 304
             L    P          + +KIG     T EL            L            + 
Sbjct: 198 PFLVVKEPGTFPKGMTGTVIDKIGYHGFLTFELNLDGVRVPERDRLTGLYGDEGADADSG 257

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               V+    +  + +A  +V   R ++ +   Y + R   G  +     ++ A+AD+A 
Sbjct: 258 GFASVQRGLNIARVHTAARAVGVARAAVEDCTAYLQEREQFGQPIGQFQALRFALADMAA 317

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           ++A A A   ++A+  DE      E+A  +++A        +MA  V  +AM+  GG+GY
Sbjct: 318 EVAQARAYWQQVAHLLDEGLPAESESAQVKLLA-------TEMAVRVTNQAMQLHGGNGY 370

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ER + R++R++   +I  G+       + + +
Sbjct: 371 TTERRVERYWRDARLTTIFEGTSEIQRRIISDRM 404


>gi|4157980|emb|CAA76079.1| SOS response Ada system protein [Geodia cydonium]
          Length = 446

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 18/317 (5%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKW 233
            P++       T++ P        G  +TE+RGG+D+  +  +   K  DG Y L G+KW
Sbjct: 18  LPQLQEAFTRLTSRDPAH--FWTSGQWMTERRGGSDVGQSTDTVALKQEDGSYRLYGYKW 75

Query: 234 FLSSPMSDAFIMLAQVEGR-----VGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRS 283
           F S+  +D    LA+V+        G   +        LE  + N L   RLK+K+G R 
Sbjct: 76  FTSASDADITFTLARVQDTHGLVTPGSRGLSMFYLKTQLESEAHNRLELVRLKDKLGTRQ 135

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             T E+    +   L+G        +  M  +  L ++++S + MR  L  +  Y  RR 
Sbjct: 136 LPTAEVLLDGSTAHLVGIEGRGVAHISPMLTITRLHNSVISSAYMRRILQLSRDYCTRRT 195

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPIT 400
           V G  L DQP+    +  + ++    T L+   A      +   +   ++   R++  I 
Sbjct: 196 VFGKYLADQPLHMHTLGQMEVETRGCTLLALETARLVGLQEAGLATKSDSLLLRLLNSIN 255

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  K A +VI+E +E  GG+      S     R++   +I  G+ N + LD+L +L+K
Sbjct: 256 KLYTAKQAVSVISEGLESFGGAAIWRHWS-PCLLRDAQVGTIWEGTTNVLSLDLLRVLQK 314

Query: 461 -GTNLFEQLFSTLEQDL 476
            G  +FE +   ++  L
Sbjct: 315 VGQEIFEVVTDAVKSRL 331


>gi|322708406|gb|EFY99983.1| glutaryl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 427

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 84/412 (20%), Positives = 143/412 (34%), Gaps = 54/412 (13%)

Query: 65  VLSCTAQELARMANYN------TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           +L+     +A  A            L AY       D+  + P    +L+     GL  +
Sbjct: 45  LLTEEELAIAETAERYCQERMMPRVLQAY------RDE-HYDP---KILQEMGELGLLGA 94

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D      V   A  +    +  +       +   S      +    T    + + P+ 
Sbjct: 95  NIDGYGCAGVSSVAGGMITRAVERVDSGYRSGMSVQSSLVMGGIYEFGTEEQKQRFLPE- 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSG-HKWFL 235
                       M K  +    GLTE   G+D  ++ S  +      G + LSG   W  
Sbjct: 154 ------------MAKGKLLGAFGLTEPNHGSDPGSMESVAKPHPTKKGYFSLSGAKTWIT 201

Query: 236 SSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +SP++D  ++ A++   G++  FLV R  +D  P  L    +K+K G R++ T  ++   
Sbjct: 202 NSPIADVLLVWAKLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDE 259

Query: 294 TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVS-G 346
                          VE +K     L+SA   +       +   +A A  YA  R    G
Sbjct: 260 CPVPEANM----FPDVEGLKGPFSCLNSARYGISMGVMGALEDCIARARTYALERKQFKG 315

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++    DE K+  E       M  + K   C 
Sbjct: 316 NPLAKYQLIQKKLADAATDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCD 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 369 VALRNARILQEIFGGNAVSDEYHIGRHVANLFVTQTYEGQSDIHSLILGRAI 420


>gi|260905206|ref|ZP_05913528.1| glutaryl-CoA dehydrogenase [Brevibacterium linens BL2]
          Length = 399

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 97/319 (30%), Gaps = 30/319 (9%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +   +    +    ++W PK             M         GLTE   G+D + +
Sbjct: 103 GSLAMFAIHHFGSEAQKEEWLPK-------------MAAGKAIGCFGLTEPDVGSDPSGM 149

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCY 272
            +  +K            W  +SP+SD  ++ A+ E     G  +V   +      G+  
Sbjct: 150 KTTAKKDGSDWILNGAKMWITNSPVSDVMVVWAKTEETDAKGKPVVRGFVVPSDTEGVQT 209

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----SG 327
             +  KI  R++ T E+   N        L  + G       L  L  A   +       
Sbjct: 210 PEIHRKISLRASITGEIVLDNVRLPEDAMLPKAKGLK---GPLSCLSEARYGIVFGVTGA 266

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L  A+ Y   R      L    + ++ +A      +  T L+  L    D  K   
Sbjct: 267 ARDALRSALEYTNTRIQFDRPLSSFQISQQKLAKAFGQYSQITLLAAHLGKLKDSEKGVR 326

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            E         + K      A  V  +     GGSG   E    RH           G+ 
Sbjct: 327 PEQ------ISLGKMVNVDTAMNVCRDLRALFGGSGITSEYPPLRHAVNLETVLTYEGTH 380

Query: 448 NAMVLDVLNLLEKGTNLFE 466
               L +   L  G N F 
Sbjct: 381 EVHQLTLGRSLT-GINAFA 398


>gi|298113042|gb|ADI58631.1| AsuB2 [Streptomyces nodosus subsp. asukaensis]
          Length = 394

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 111/380 (29%), Gaps = 26/380 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
              +R +     P    L       G         +          +    L+  +    
Sbjct: 35  AWADRIESSGTVPE--ELWTELRERGYLSLAAPPGYGGRGVSFPQWMELIELFARSHASI 92

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++     +   +    TP   + +               P     V +   LTE + G
Sbjct: 93  RMIVHVVNGTWRAMDEFATPEQRERFV-------------LPSVAGRVRVAFTLTEPQAG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +  A + S   +  D  Y              D +++ A+V G  G      L+      
Sbjct: 140 SG-ADLRSTVVREGDTYYLTGAKHLITFGVRCDYWLLAARVAGSTGHEGTVALMVPRDAP 198

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV----EDMKILIYLDSAIMS 324
           G+  +     +G        L F  T   +   L      +            +  A+  
Sbjct: 199 GVTVEDTSQTMGVVGTDHARLTFDRTPVPVAHRLGAEGDGLAVALGGFLTPSRISVAMSC 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +   A+ YAR R   G  L  +  ++  +A+   DI A+  L    A  ++   
Sbjct: 259 VGLASRAQELALEYARGRVTFGKPLTSRQALQFMLAENEADIEASRQLVLHAARRWEAGG 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                   A  ++ + K     M   V  +A++  GGSGY +   I R YR++ A     
Sbjct: 319 RD------AAKLSSMAKLTAVDMLTRVTDKALQVHGGSGYWKSSPIERVYRDARAQRFEE 372

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+       V   L      
Sbjct: 373 GTNEIQKAVVFRELVNSAEA 392


>gi|119476455|ref|ZP_01616806.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119450319|gb|EAW31554.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 385

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 121/349 (34%), Gaps = 35/349 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             ++     G    +    +       +    A    +      G      + +   +  
Sbjct: 38  EFVQTLNDAGYLSILIPEEYGGSGLPLS-AACAVLEEIQRSGGNGGACHAQMYTMGTLLR 96

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + + PKI               +      G+TE   GTD + I +   +  D 
Sbjct: 97  HGTEAQKEKYLPKIADG------------SLRLQAFGVTEPTSGTDTSRIRTTAVRDGDD 144

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSP---NGLCYQRLK 276
            Y ++G K F+S +  SD  ++L +   R         +  LL D      NGL  + + 
Sbjct: 145 -YVVNGQKVFISRTEHSDLMVLLVRTTPRDECSKHTDGMSVLLVDMRDAVGNGLTIKPIN 203

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + N ++   EL F +       ++G        + D      +  A   +   R    
Sbjct: 204 TMM-NHAS--TELFFDDLRVPAENVIGGEGNGFKCILDGMNAERILIAAECIGDARWFTE 260

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           ++ HYA  R V G  +     ++  IA   +   AA  +  + A+ +D+ K    EA  A
Sbjct: 261 KSSHYACEREVFGRPIGQNQGVQFPIARAHIQTEAAALMVQQAADLYDQGKRPGAEANMA 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +++A    +    +        ++  GG G+ +E  + R +RE+    +
Sbjct: 321 KMLASEASWAAADV-------CIQTHGGYGFTQEYDVERKFRETRLYQV 362


>gi|145224121|ref|YP_001134799.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145216607|gb|ABP46011.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 413

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 114/314 (36%), Gaps = 34/314 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + + E                   +TE   G+D    + S  
Sbjct: 116 PTIQGRGTLAQQERWLPGLVTYE-------------KIGAWAITEPDSGSDAFGGMKSWV 162

Query: 219 QKISDGI--YCLSGHKWFLSSP-MSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCY 272
            + +DG   Y L+G K F+++   +D  ++ A+++          V   + D    G   
Sbjct: 163 ARAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEPGVDKRDRKVLTFVLDKGMEGFVQ 222

Query: 273 QRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +   K+G  S+ T EL F+N               +                +  A M+
Sbjct: 223 SKPFRKMGIHSSRTGELFFNNVRLGRDRLLGETENNEAGDGRDSARSSFSAERIGVAAMA 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   L  ++ YA+ R + G  +    +++  +A + +       + FR+  S     
Sbjct: 283 LGVIEECLRLSVDYAKTRKLWGQEIGQFQLIQLKLATMEVARMNVRNMLFRVIESSQSGA 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S         A   K++C + A  V  +A++  GG+GY+ E  + +  R++ +  I  
Sbjct: 343 PISLA------EASAIKWYCSQAATDVAMDAIQLFGGNGYMTEYRVEQLARDAKSLMIYA 396

Query: 445 GSGNAMVLDVLNLL 458
           GS    +  V   L
Sbjct: 397 GSNEVQITHVARGL 410


>gi|320179596|gb|EFW54545.1| Crotonobetainyl-CoA dehydrogenase [Shigella boydii ATCC 9905]
 gi|332095325|gb|EGJ00348.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella boydii
           5216-82]
          Length = 380

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 127/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPSAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|302557089|ref|ZP_07309431.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302474707|gb|EFL37800.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 380

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 125/353 (35%), Gaps = 23/353 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASMVAL 164
           R + H GL+  + +  +  V   + +      L    L  +  +  ++       +++A 
Sbjct: 39  REAHHPGLYARLAELGWLGVCLPEEYGGAGGGLADACLFLEETSYGMVPAGGFVTTVIAA 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R         F  E               + + ++E   G+D+ A+  + ++  DG
Sbjct: 99  KAYER---------FGTERQRQEVLTGAVRGDVLSIAMSEPGAGSDVGALRCRARRAPDG 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            + + G K ++S+      I+L    G      +          G+  + ++  +G R  
Sbjct: 150 GWLVDGQKTWISNAHCARSILLVARTGEDKHAGLTMFHLPADTPGVEIRGIET-MGGREV 208

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
              ++  +        ++G+++     +        L  A   +   R +  +A+ Y R 
Sbjct: 209 N--DVFLTGVRLPDDAVVGEVDGGWKQLMAGLNYERLFLAANMLGLARRAFDDAVTYVRE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  IAD+A +I  A  L   +A   D    R          A + K
Sbjct: 267 REQFGRPVGSFQALRHRIADLATEIECARLLVREVALDCDAQPDR-----LFPREASMAK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + A     E M+ +GG GY  E  + RH R +  +++  G+       +
Sbjct: 322 LKATETAKRAALEGMQMMGGYGYTTEFDMERHLRAAVVSTVYGGTSEIQRDVI 374


>gi|229584383|ref|YP_002842884.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019432|gb|ACP54839.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 391

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 137/351 (39%), Gaps = 28/351 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G +   +++ +          I    +         +++  S +    +    +    + 
Sbjct: 63  GFNSIPYNKEYGGFELPYIIYIIGMEVLAYGSPALANILWASNSVIDGLHYFGSNLQKEY 122

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +               P+ K      + +TE  GG+ I  I ++ +K  D  Y +SG K 
Sbjct: 123 YLK-------------PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGD-QYIISGKKV 168

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++ P++D F++ A     +  F++P  +E     GL   +   K+G R     E+   
Sbjct: 169 FITNAPIADIFLVFANTSNGITAFIIPSNVE-----GLKIDKPIRKLGLRGAVFSEVSLD 223

Query: 293 NTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N    +   L      +   +   I   + +A +++      L +   YA  R +    L
Sbjct: 224 NVVVPIENRLGEEGEGINIARHIFIGGRIIAAAIALGIGDAVLDQVYQYAISRELGNHKL 283

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           ID  ++K  IA+    + A    ++ +A   D+   +         +A I+K +  +   
Sbjct: 284 IDFQILKEKIANSETILQAGKIYTYYVAYLMDKMLRQE-----LNELASISKLFTTEGVL 338

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  EA+   GG GY ++ +I  ++R+    +I  G+ +   L + + L+K
Sbjct: 339 NISNEAISIFGGYGYTDDLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389


>gi|167645024|ref|YP_001682687.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167347454|gb|ABZ70189.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 569

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 126/376 (33%), Gaps = 41/376 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G+        +      +      +     A +  G L + S  +  ++  
Sbjct: 218 ELVEELGALGVFGLTIPEEYGGSGMGKTAMCVVSEELSRAWIGVGSLATRSEIAGELILT 277

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W PKI                S+      TE   G+D+ ++ ++     D 
Sbjct: 278 GGTEAQKQYWLPKI-------------SDASILPTAVFTEPNTGSDLGSLRTRAALTGDQ 324

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN---------GLCYQR 274
                   W   +  +D   +L + E        +  LL               G+    
Sbjct: 325 YVVTGNKTWITHAARADVMTLLVRTEPDTTDYRGLSMLLAPKPRGVEGNDFPADGMSGGE 384

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILI------YLDSAIMSVSG 327
           +   IG R     EL F    GF +   N+  G P +  K L+       + +A  +V  
Sbjct: 385 I-GVIGYRGMKEYELAFD---GFTVPAENLLGGVPGQGFKQLMATFESARIQTAARAVGV 440

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +L   + YA  R   G  + + P +   +A +A +I     L++  A   DE K   
Sbjct: 441 AQAALETGLGYALDRKQFGQAIFEFPRVHNKLAMMAAEIMGVRQLTYFAARQKDEGKRCD 500

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  A+++A            A    A++  GG+G+  E   +R   ++   +I  G+G
Sbjct: 501 LEAGMAKLIAARVA-------WAAADNALQIHGGNGFAMEYVASRLLADARILNIFEGAG 553

Query: 448 NAMVLDVLNLLEKGTN 463
                 +   L +  N
Sbjct: 554 EIQAQVIARRLLEEGN 569


>gi|111222799|ref|YP_713593.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150331|emb|CAJ62028.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 399

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 117/360 (32%), Gaps = 27/360 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMVAL 164
           L  ++    L        F         ++  A      ++ A      +   +   V  
Sbjct: 62  LQAKARAADLWALQTPAEFGGAGLSVLGQVVVAEEAAKCRMGAFFPACGAFGGNPPTVMF 121

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISD 223
             T    + +A  I                +      ++E  GG+D A AI  + ++  D
Sbjct: 122 SATKEQFETYARPIIEG------------RAGRAFTAISEPSGGSDPARAIRCRAERDGD 169

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W   +  +   ++ A+         +   +      GL    +       S
Sbjct: 170 HYVINGTKMWTTHAGSAAWGVLYARTGEPGRRDGISCFILPNDVEGLTKFPIDV---MTS 226

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            A  EL F N        +G+            +   +  A   +   + +L  AI + +
Sbjct: 227 YAPYELHFDNVRIPVANRIGEEGQGFNLASQFLVSGRIAYAAGPIGIAQQALGMAIDWVK 286

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R V G  L D+  ++  IAD  +++ AA  L ++ A + D  K    +       A + 
Sbjct: 287 QREVFGSRLADKQGIQWMIADSEVELRAARLLMYQAAWNADLGKDVRVD-------ASVC 339

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  + A  V+   ++  G  G  +E  + R +R+     +  G+     + +   L +
Sbjct: 340 KMYGTEAAYRVLDRCVQMFGALGLSKEMPLERWFRDLRVKRLGEGASEVQKMIIARELLR 399


>gi|330467720|ref|YP_004405463.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328810691|gb|AEB44863.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 392

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 109/366 (29%), Gaps = 30/366 (8%)

Query: 98  EFHPAWHALLRRSIHDG-LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSP 154
            +          ++  G L                A     A   L A        +   
Sbjct: 45  WYDDGQLPARELAVELGELGVLGMHLQGYGCAGTSATAYGLACFELEAGDSGLRSLVSVQ 104

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +   +    +    + W P             PM   +     GLTE   G+D + +
Sbjct: 105 GSLAMYAIWRFGSEEQKQQWLP-------------PMAAGAAIGCFGLTEADFGSDPSGM 151

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++ ++            W  +  ++D  ++ A+ +  V  FLVP         G     
Sbjct: 152 RTRARRDGSDWVLTGTKMWITNGSIADVAVVWARTDEGVRGFLVPA-----GTPGFTTAE 206

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSL 332
           +  K   R++ T EL   +        L  + G    +  L          ++      L
Sbjct: 207 ITRKQSLRASVTSELVLDDVRLPADAMLPAAAGLSGPLSCLNEARFGIVFGALGAAHDCL 266

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              + YAR R +    L      +  +AD++L++     L+  L  + D       +   
Sbjct: 267 QTTVEYARSRQIFDRPLAAYQATQLKLADMSLELGKGMLLAMHLGAAKDAGTLDHRQ--- 323

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 + K    + A A+  E    +G +G   +  + RH     +     G+     L
Sbjct: 324 ----VSLGKLNSVREAIAIARECRTILGAAGITLDYPVIRHAANLESVLTYEGTSEVHQL 379

Query: 453 DVLNLL 458
            +  +L
Sbjct: 380 IIGQVL 385


>gi|315444457|ref|YP_004077336.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315262760|gb|ADT99501.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 413

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 114/314 (36%), Gaps = 34/314 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
             +    T    + W P + + E                   +TE   G+D    + S  
Sbjct: 116 PTIQGRGTLAQQERWLPGLVTYE-------------KIGAWAITEPDSGSDAFGGMKSWV 162

Query: 219 QKISDGI--YCLSGHKWFLSSP-MSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCY 272
            + +DG   Y L+G K F+++   +D  ++ A+++          V   + D    G   
Sbjct: 163 ARAADGSGDYILNGQKTFITNGPDADVVVVYAKLDEPGVDKRDRKVLTFVLDKGMEGFVQ 222

Query: 273 QRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +   K+G  S+ T EL F+N               +                +  A M+
Sbjct: 223 SKPFRKMGIHSSRTGELFFNNVRLGRDRLLGETEDNEAGDGRDSARSSFSAERIGVAAMA 282

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   L  ++ YA+ R + G  +    +++  +A + +       + FR+  S     
Sbjct: 283 LGVIEECLRLSVDYAKTRKLWGQEIGQFQLIQLKLATMEVARMNVRNMLFRVIESSQSGA 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S         A   K++C + A  V  +A++  GG+GY+ E  + +  R++ +  I  
Sbjct: 343 PISLA------EASAIKWYCSQAATDVAMDAIQLFGGNGYMTEYRVEQLARDAKSLMIYA 396

Query: 445 GSGNAMVLDVLNLL 458
           GS    +  V   L
Sbjct: 397 GSNEVQITHVARGL 410


>gi|109149121|ref|XP_001117969.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like,
           partial [Macaca mulatta]
          Length = 259

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 17/270 (6%)

Query: 112 HDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             GL     +  +        AH +    +   +        + S    + +        
Sbjct: 3   EQGLLGLTVEEEYGGTGMGYLAHVVAMEEISRASGGIGLSYGAHSNLCVNQLRKNGNEEQ 62

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            + + P +             +  S+   L ++E   G+D+ ++  +  K  D       
Sbjct: 63  KQRFLPGL-------------RNGSLVGALAMSEPGAGSDVVSMKLRADKRGDRYVLNGN 109

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  + P +D  ++ A+ +   G   +   L +    G    +  +K+G RS+ T EL 
Sbjct: 110 KMWITNGPDADVLVVYAKTDMEAGAKGITAFLVEKGMKGFSTAQKLDKLGMRSSPTCELV 169

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGG 347
           F +        L    G V  +   +  +  ++S   +  M  ++   + Y   RH  G 
Sbjct: 170 FQDCEIPEENVLGQVGGGVRVLMSGLDYERVVLSGGPLGLMAAAMDVVMPYVHERHQFGE 229

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLA 377
            +    ++   IAD+ + + A  A  + +A
Sbjct: 230 PIGSFQLILAEIADMYVGLGACRAYVYAVA 259


>gi|289640901|ref|ZP_06473071.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289509216|gb|EFD30145.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 378

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 133/372 (35%), Gaps = 30/372 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+    P      ++    G    +       +                  L+    
Sbjct: 30  RKHDESREFPD--EAYQKIADRGWLGLLILEEQGGLDADPVMYAIFCEAMAKFSLDFAAC 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  S+ +A+ +A   T    + + P   +                   + +TE   G+D 
Sbjct: 88  VMTSMFTATNIANHGTAEQREQYLPGFLAG-------------RTKFSVSITEPGAGSDA 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM--SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           AA+ ++    +D  + L+G+K F S          +LA+         +  +L   +  G
Sbjct: 135 AAVQTRAVLDNDH-WVLNGNKVFCSGAHLPDTVITVLARTSPER-HRGLSLILVPNTAPG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  ++L N I  RS  T E+ F++     G L+G++N   G + +      L  A   V 
Sbjct: 193 VDIRKL-NTIVRRSLGTTEIFFTDVHVPAGNLIGEVNNGWGYIGEHLEYERLSLAASYVG 251

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L + + Y R R   G  L    V+K  +A+   ++ AA  L +  A      +  
Sbjct: 252 NARTALDDTVTYTRNRTQFGRPLSSFQVLKHRMAENECEVEAARLLVYNAATKMARGERA 311

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E + A       K +   +A       M+ +GG   + E  + R++RE+    +  G+
Sbjct: 312 LKEVSMA-------KVFAADVAFRTSFNGMQALGGYAQLPEFDMERYFREAKHAMVGGGA 364

Query: 447 GNAMVLDVLNLL 458
                  +   +
Sbjct: 365 SEIQRSIIAKEM 376


>gi|33591828|ref|NP_879472.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571471|emb|CAE44960.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381245|gb|AEE66092.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 382

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 129/361 (35%), Gaps = 29/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-IRAARLYLMAQLEAGHLMSPSVTSASMV 162
             +  R    GL    +  +       +    I    L  ++Q  A    + +      +
Sbjct: 41  RRVFERWGELGLLGVRYPEADGGSGLDKVSDCIVREELSYLSQAFASTWSAHTHLGIWPI 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP     +              AP        G GL+E  GG+++ A+ ++ +++ 
Sbjct: 101 WKAGTPAQKARFL-------------APALAGRKVAGFGLSEPDGGSNVRAMKTRAERVE 147

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G        +  ++P +D  ++ A+    +    +   + +    G    +LK K G R
Sbjct: 148 GGWRLHGSKLYITNAPFADFLLVAARTSAALKPESISLFIVELPNAGFDIAKLK-KEGIR 206

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--- 339
           ++ T  +   N F      L  + G      IL  L    + V+   + +A A   A   
Sbjct: 207 ASETALIHIDNAFVPDDCLLGETEGTYP--LILESLSENRVGVAANALGMARAAFDAAAS 264

Query: 340 --RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R V+G  + +   +   +AD++  I A   L +  A   D+    +  AA  +++A
Sbjct: 265 FANDRLVAGKRVGEYQAIAHKLADMSAQIEATRWLVYYGAWRVDQGTLDAATAARVKLVA 324

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A AV  +A+   GG+G + E  + R +R++    I   +       +   
Sbjct: 325 -------SETAVAVSEQAIRIFGGAGIMREYPVGRIHRDALVYVIGEDTSEIQKNIIARS 377

Query: 458 L 458
           L
Sbjct: 378 L 378


>gi|325928744|ref|ZP_08189914.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
 gi|325540912|gb|EGD12484.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118]
          Length = 391

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 126/374 (33%), Gaps = 37/374 (9%)

Query: 91  GERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           G+ +D   F   W   L    +   L  S+  R     +    + +    L         
Sbjct: 43  GDAFDAGRFPREWIPELAELGL---LGASLPPRDGGAGLGAVCYGLICQELERGDSGLRS 99

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S      +    +    + W P+             M    V    GL+E +GG+
Sbjct: 100 FVSVQSSLCMYPIHAYGSDEQRQRWLPE-------------MAAGRVIGCFGLSEAQGGS 146

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D AA+T++  +  DG        W  +  ++   I+ A  +       V   L +    G
Sbjct: 147 DPAAMTTRAVREGDGWRLNGAKLWITNGSIAGLAIIWAHTDD-----GVRGFLVETDSAG 201

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----S 324
                + +K+  R++ T  L   N F      L  + G       L  L+ A       +
Sbjct: 202 FSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPRAAGLKA---PLSCLNQARYGIAWGA 258

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      L EA+ YA  R + G  L      +  +AD+A  I+ A  L+ +L    D   
Sbjct: 259 IGAAGACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLGRLKDAGT 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            + E+         + K+  C+MA  V  E  + +G +G   E    RH     +     
Sbjct: 319 LQPEQ-------ISLAKWNNCRMALDVARECRDLLGAAGITTEHVAIRHALNLESVITYE 371

Query: 445 GSGNAMVLDVLNLL 458
           G+     L V   L
Sbjct: 372 GTETVHQLVVGRAL 385


>gi|325964229|ref|YP_004242135.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470316|gb|ADX74001.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 401

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 123/371 (33%), Gaps = 38/371 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +     G+     +    P      + + A  L          +      + + +  
Sbjct: 60  ELAQELGELGVLGMHLEGYGCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHT 119

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-- 222
             +    ++W P++ + E             +     LTE   G+D +A+ +   +    
Sbjct: 120 WGSEDQKQEWLPRMAAGE-------------IIGCFALTEPTAGSDPSAMATLAWRDGPG 166

Query: 223 --DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
              G       +W   + ++   ++ A  +  V  FLVP         G+    +  K+ 
Sbjct: 167 EEAGWVLNGTKRWIGLASVAGVMVVWAATDDGVHGFLVPA-----GTPGVTAVPIPQKLS 221

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++   ++ F +     LG   +             L+ A   ++   +  A      A
Sbjct: 222 MRASIQCDVVFDDVR---LGPEALLPAARGLRGPFTCLNEARYGIAWGAMGAARDSYEAA 278

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  L    + +  + ++ L+I   T L+  L    D  K R E+      
Sbjct: 279 LAYSQERLQFGKPLAGYQLTQEKLVNMLLEIQKGTLLALHLGRLKDAGKLRPEQ------ 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K    + A A+  EA   +GG+G   + S  RH     +     G+     L + 
Sbjct: 333 -ISLGKLNNVREALAIAREARSILGGNGITLDYSPLRHAANLESVRTYEGTDEVHTLVLG 391

Query: 456 NLLEKGTNLFE 466
             +  G N F 
Sbjct: 392 RHIT-GLNAFR 401


>gi|118469492|ref|YP_888400.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170779|gb|ABK71675.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 407

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/412 (17%), Positives = 130/412 (31%), Gaps = 31/412 (7%)

Query: 58  LELLGEYVLSCTA---QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           L  L +   S  A   +ELA              P     D+       H  ++    +G
Sbjct: 18  LHALLDEPASDAALTERELAVRTQTRDVVAREIAPRAAELDRTHTFA--HEGVQALAAEG 75

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L   I+                A             +    +  A  + L  +  +   +
Sbjct: 76  LCGLIFPTHLGGTGDTNVAYAVAMEEITAGCASTSLVFMTQMHCAYPIMLAGSDELQHRY 135

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P +                S    LG+TE   G+D++++T+   + +DG        + 
Sbjct: 136 IPGLLDG-------------SRYGSLGITEPDAGSDVSSLTTTATRTADGWSVNGQKTFI 182

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            +   +D  I  A ++   G   +   + DG  +G+ +     K+G   ++T EL F + 
Sbjct: 183 TTGDRADIIICFATIDRAAGRNGITAFVVDGRWDGVGHGTPFEKMGMHGSSTAELFFDSV 242

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 LLG+       V    +   + +A   V   R + A  +    R H  G  L D
Sbjct: 243 AVPRDHLLGEEGRGWSVVMSSVVKSRISAAAQGVGLARAAYARTLAALTRMH--GKRLPD 300

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           +      +A++   I     L   +A   D     +           I K  C  +    
Sbjct: 301 EDT--FELAELRGRILQGRMLLHAVARQVDTNPDVT------PGQIGIMKQCCTDLGFDA 352

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             +A   +G  G +    + R  R++    I  G+     L V   + + T 
Sbjct: 353 AVQATRILGPYGDLAVLGVERCLRDAKVTQIYDGTNEIQRLLVGREIIRATG 404


>gi|302905204|ref|XP_003049220.1| hypothetical protein NECHADRAFT_45046 [Nectria haematococca mpVI
           77-13-4]
 gi|256730155|gb|EEU43507.1| hypothetical protein NECHADRAFT_45046 [Nectria haematococca mpVI
           77-13-4]
          Length = 439

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 51/442 (11%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLG---EYVLSCTAQELARMANYNTPQL 84
           PP +   + +   +   A +  + +   +E E  G       S   +            L
Sbjct: 20  PPPYYTESHFKLQAETRAYVNEYITPFCEEWERQGSIPREASSTLHKRRG---------L 70

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
             Y   G       F P    L    +  G+    WD   + +V  +  +     +    
Sbjct: 71  LGYVAAG------LFPPEPDYLGEVILPCGIPPDKWDGFHDHIVVDELTRCGYMGV---- 120

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L   ++     +    TP   +   P I+               +    L +TE
Sbjct: 121 ---VWALACGNIIGCPPLINHGTPEQKRRLLPSIY-------------NGTTRFCLAVTE 164

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A I +  ++  D        KW +++ +   +   A   G  G   +  L+  
Sbjct: 165 PSAGSDVAGIKTVAKRQGDKYIVNGTKKW-ITNGVYADYCTAAVRTGGPGQSGISALVIP 223

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK----ILIY 317
               G+  +R+ N  G  ++ +  +EF +     G LLG  N   G +   K        
Sbjct: 224 LDAKGVTRRRMDNS-GINASGSTFIEFDDVEVPIGNLLGKENEGFGIIMSSKVTDFNHER 282

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           L  A + +   RV +  A  YA +R   G  LI+  +++  + D    I AA A   +L 
Sbjct: 283 LWLATICLRLARVCVGHAHDYATKRETFGKKLIENQIIRAKLVDSGKKIQAAYAWLEQLI 342

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHY 434
            +     +          +A + K    +     + EA +  GG GY +      + +  
Sbjct: 343 WTRQRLTNHDGPDTLGASVA-MLKTLSARTLEETVREAQQIFGGLGYSKNGRGRVVEQIS 401

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     +  GS   +      
Sbjct: 402 RDFRVLVVGGGSEEILTDFAYR 423


>gi|326476534|gb|EGE00544.1| glutaryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 432

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 23/292 (7%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-W 233
           +  S E        + +  +    GLTE   G+D  ++ +  +      G Y LSG K W
Sbjct: 147 EFGSEELKQRLLPQLAQGKLLGCFGLTEPNHGSDPGSMETVARPHPTKKGFYALSGTKTW 206

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFS 292
             +SP+SDAF++ A+++G++  F++ R   D  P G L    +KNK   R++ T  ++  
Sbjct: 207 ITNSPISDAFLVWAKLDGKIRGFVLER---DQCPEGTLRTPAIKNKTALRASITGMIQMD 263

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
           N            TG V        L+SA + ++      +   ++ A  YA  R    G
Sbjct: 264 NCPVPETNMFPEVTGLV---GPFTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKG 320

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++A   DE K+  E       M  + K   C 
Sbjct: 321 NPLAKYQLVQKKLADAATDAAYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCD 373

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A A      E  GG+   +E  I RH           G  +   L +   +
Sbjct: 374 RALAGSRTLQEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLILGRAI 425


>gi|212544852|ref|XP_002152580.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|212544854|ref|XP_002152581.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065549|gb|EEA19643.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065550|gb|EEA19644.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
          Length = 342

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 38/309 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           +    T      + P++              K  +    GLTE   G+D  ++ +  +  
Sbjct: 53  IHEFGTQEQKDRFLPQL-------------AKGKLLGCFGLTEPNHGSDPGSMETVAREH 99

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRL 275
               G Y LSG K W  +SP+SD  ++ A++E  G++  FL+ R      P G L    +
Sbjct: 100 PTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIKGFLIER---SKCPPGTLETPAI 156

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRV 330
           KNK   R++ T  ++  N    +   L  + G          L+SA + ++      +  
Sbjct: 157 KNKTALRASITGMIQMDNCPVPVENMLPDAEGLS---GPFTCLNSARLGIAFGVTGALED 213

Query: 331 SLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           S++ A  YA  R    G  L    ++++ +AD + D A  T  + ++A   D  KS  E 
Sbjct: 214 SISRAREYALDRKQFRGNPLAKYQLIQKKLADASTDAAFGTLAAIQVARLKDAGKSTPE- 272

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 M  + K   C  A A      E  GG+   +E  I RH           G  + 
Sbjct: 273 ------MISMIKRQNCDRALANARTLQEIFGGNATSDEYHIGRHVANLFVTQTYEGQSDI 326

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 327 HALILGRAM 335


>gi|302890327|ref|XP_003044048.1| hypothetical protein NECHADRAFT_91441 [Nectria haematococca mpVI
           77-13-4]
 gi|256724967|gb|EEU38335.1| hypothetical protein NECHADRAFT_91441 [Nectria haematococca mpVI
           77-13-4]
          Length = 417

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 110/314 (35%), Gaps = 26/314 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      V     P   + + P + S                   L +TE   G
Sbjct: 114 WALGCGNSIGLPPVIQFGNPEQKRRFLPDVLSG-------------KTRFCLAVTEPDAG 160

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A IT+  ++  D        KW +++ +   +   A   G  G F +  L+     +
Sbjct: 161 SDVAGITTTAERKGDKYIVNGAKKW-ITNGIFADYCTAAVRTGGDGTFGISALIVPLKAS 219

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  ++++N  G  ++ +  +EF N       LLG+ N     + +      L  A  ++
Sbjct: 220 GVTCKKIENS-GVEASGSTYIEFDNVEVPVSNLLGEENKGFPIIMNNFNHERLWLACTAL 278

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV L +A  +A  R   G  LI   V++   + +A  I +  +   +L         
Sbjct: 279 RMARVCLHDAYKHALNRETFGKPLIQNQVIRAKFSTMARHIESTHSWMEQLVYISKTNPK 338

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
                 +A       K    +    V  E+ + +GG GY        I +  R+     +
Sbjct: 339 APLGGQFAN-----LKVLAGQTLEKVNRESQQVMGGLGYSKNGRGARIEQISRDVRVMVV 393

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    LN
Sbjct: 394 GGGSEEILTDLALN 407


>gi|289613968|emb|CBI59202.1| unnamed protein product [Sordaria macrospora]
          Length = 438

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 27/290 (9%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSP 238
           E        M K  +    GLTE   G+D  ++ +  +      D         W  +SP
Sbjct: 156 EQKERFLPGMAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKKDVYLLSGAKTWITNSP 215

Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           ++D  ++ A++   G++  FLV R      P G L   ++KNK G R++ T  ++  N  
Sbjct: 216 IADVLVVWAKLQETGKIRGFLVER---SACPPGTLETPQIKNKTGLRASITGMIQLDNCP 272

Query: 296 GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-GGI 348
                        VE +K     L+SA   ++      +   L+ A  YA  R    G  
Sbjct: 273 VPKENM----FPEVEGLKGPFTCLNSARYGIAFGMMGALEDCLSRARTYALERKQFKGNP 328

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L    ++++ +A+   D+A  T  + ++    DE K+  E       M  + K   C   
Sbjct: 329 LAKYQLVQKKLAEAITDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRT 381

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                   E  GG+   +E  I R            G  +   L +   +
Sbjct: 382 LYHARTLQEIFGGNAVSDEYHIGRVVANLYVTQTYEGQSDIHSLILGRAI 431


>gi|293607456|ref|ZP_06689794.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814158|gb|EFF73301.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 386

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 29/307 (9%)

Query: 168 PRVHKDW--------APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
           P V  DW          +  +         P+ +        +TE + G+D   + ++ +
Sbjct: 91  PHVLGDWGGPSRIGNLVRYATPYQLERYIMPVIQAERGACFAMTEPQSGSDATRLETRAE 150

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
              D  Y ++G K ++++ M +D  I +   +   G   +  +  D    G+    + + 
Sbjct: 151 VDGDD-YIVTGVKHYITASMFADFAITMCVTDPTRGVDGISAIFIDLDSPGVSL--VHDC 207

Query: 279 IGNRSN-ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVS 331
           +         ++ F           N+   P +  KI +       L      +   R +
Sbjct: 208 VPMTGQYVDADIVFDKVRVP---RKNLIGEPGQGFKIAMNRVSVNRLLHCPTMIGLARQA 264

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA+ R   GG +     ++  +AD+A  + A   +    A   D  +   EEA+
Sbjct: 265 FTLAVDYAKHRQQFGGPISRFQAIQHMLADMATALYACEHMVLATAARADAGEDVREEAS 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +  +    +  +AM+  G  G  +   +   +R      I+ G+     
Sbjct: 325 M-------CKLFVSERCFEIADKAMQIHGNVGVTKNHPVEFIFRRLRLYRIVTGTSEIQR 377

Query: 452 LDVLNLL 458
             +   +
Sbjct: 378 NTIAKGI 384


>gi|94311137|ref|YP_584347.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354989|gb|ABF09078.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 388

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 142/407 (34%), Gaps = 40/407 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPG-GERWDKVEFHPA---WHALLRRSIHDGLHCSIW 120
           +   T  EL    + +           GE    V+ H A      L+R+    G      
Sbjct: 1   MSDKTYLELPFFDDTHRSLERDLDAWCGENLCGVDHHDADAACRTLVRQLGQAGWLRYCV 60

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             +F   +     +        +A+ +  A    +     +  + L  +  V + + P++
Sbjct: 61  PAAFGGALPALDSRALCLLRETLARHDGLADFAFAMQGLGSGAITLAGSDAVRERYLPRV 120

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLS 236
            + E                   L+E   G+D+AA+    +   DG          W  +
Sbjct: 121 ANGE-------------AIAAFALSEPEAGSDVAAMQCSAKLSDDGTHYVLNGAKTWISN 167

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++D + + A+         +   + D +  GL      + I     AT  L F +   
Sbjct: 168 GGIADFYCVFARTGEAARARGITAFVVDANTPGLSIAERIDVIAPHPLAT--LRFDDCRV 225

Query: 297 FLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILI 350
            +    N    P +  K+ ++ LD    SV+   +    A           R + GG+L 
Sbjct: 226 PVG---NRLGEPGQGFKVAMMTLDIFRASVAAAALGFGRAALDDALARATSRPMFGGVLA 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409
           D  + + AI D+A  I AA  L++R A   D   +  + EAA A+++A        + A 
Sbjct: 283 DLQLTQAAIGDMATAIDAAALLTYRAAWLRDVRQQRTTREAAMAKMVA-------TENAQ 335

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            VI  A++  GG G      +   YRE  +  I  G+     L +  
Sbjct: 336 QVIDRAVQMFGGLGVKVGTRVESLYREIRSLRIYEGATEVQKLIIAR 382


>gi|302415467|ref|XP_003005565.1| acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261354981|gb|EEY17409.1| acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 604

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 13/280 (4%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI 244
                +      I L +TE   G+D+A ++ + +   DG  + ++G K ++++     + 
Sbjct: 316 RILPGILAGDERICLAITEPDAGSDVANLSCEAKLTEDGKHFIVNGEKKWITNGKWARYF 375

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
             A   G  G   V  LL +    G+  +++ +  G  S+ T  + F +    +   L  
Sbjct: 376 TTAVRTGEPGMNGVSLLLIERDFPGVTTRQM-DCQGVWSSGTTYITFEDVKVPVENLLGK 434

Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  +        +   I  +   RV  +E++ YA +R   G  LI+ PV++  +A 
Sbjct: 435 KDRGFRAIMTNFNHERIGIIIQCLRFSRVCYSESVSYASKRRTFGKKLIEHPVIRLKLAH 494

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAEAMECI 419
           +A  I A+      L N   + +   E  A  ++   I                EA +  
Sbjct: 495 MARQIEASYNW---LENLMFQCQKMGETEAMLKLGGAIAGLKAQSTVTFEFCAREASQIF 551

Query: 420 GGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLN 456
           GG  Y        + R YR+  A +I  GS   M+   + 
Sbjct: 552 GGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSIR 591


>gi|328851334|gb|EGG00489.1| hypothetical protein MELLADRAFT_111712 [Melampsora larici-populina
           98AG31]
          Length = 358

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 117/344 (34%), Gaps = 39/344 (11%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  +  +       +   S      +    +    + + P++ S           
Sbjct: 43  AYGLLAREVERVDSGYRSAMSVQSSLVMHPINEFGSEEQKQRYLPELASGNM-------- 94

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQ 248
                    GLTE   G+D A + +   + +DG           W  +SP++D FI+ A+
Sbjct: 95  -----IGCFGLTEPSHGSDPAGMLTTAMEATDGSGGFVLNGSKTWITNSPIADVFIIWAK 149

Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
              +G++  F++     +    GL   ++++K+  R++ T  +   +        L   T
Sbjct: 150 CKWDGKIRGFIL-----EKGMPGLSAPKIQHKLALRASTTGSIFMDSVPVPSGNVLPKVT 204

Query: 307 GPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
           G          L+SA + +       +   +  A  YA  R      L    ++++ + D
Sbjct: 205 GLK---GPFSCLNSARLGISFGVIGALEDCVKRAREYALDRVQFNRPLASFQLVQKKLVD 261

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
              +       S +L    D+     E       M  + K   C  A       ++ +GG
Sbjct: 262 ANTEAVLGLCASIQLGRLKDQGTWCPE-------MVSLLKRNNCGKALEHARILLDVLGG 314

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +   +E  I R        +   G+ +   L +L     G   F
Sbjct: 315 NAVSDEYHIGRIAANLQVANTYEGTHDIHAL-ILGKAMTGLQAF 357


>gi|311279779|ref|YP_003942010.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
 gi|308748974|gb|ADO48726.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter
           cloacae SCF1]
          Length = 380

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 125/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  + E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTPEQIDRIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  EL F 
Sbjct: 155 FITSSAYTPYVVVMARDAASPDKPIFTEWCLDMSKPGIKVNKLE-KLGLRMDSCCELTFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 NVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + A   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNAMKNMLYEAAWKSDNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRSVLK 377


>gi|326389069|ref|ZP_08210651.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206669|gb|EGD57504.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 386

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 108/356 (30%), Gaps = 25/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+R     GL        F  +     +          A    G++      +  ++A 
Sbjct: 42  DLVREMGSLGLIAPELPEEFGGLGAGAIYSGVIIEEIGRADFNFGYVNILGSLNGQILAN 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P + + W P++ + E               + + LTE RGG+D A +  + ++  D 
Sbjct: 102 FANPEIKRHWLPRLIAGECM-------------VAIALTEPRGGSDAANLGLRMERDGDH 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                       +  +   ++ A+          +  +       G+   R  + +G   
Sbjct: 149 YVINGEKTSISCADQASGAVVFARTGSVEDKARGISAVFVPMDTPGVSTTRFHD-MGQHC 207

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                + F N       LLG  N     V           A+  +   R SL E   Y  
Sbjct: 208 VGRGSIFFDNVRVPVDHLLGGENQGFVQVMQGFDFSRSLIALQCLGTARQSLTETWDYIG 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L     +   +AD    +  A  LS+      D       EAA A+   P+ 
Sbjct: 268 GRKAFGKPLAAFQGITHQLADFDTKVEGARLLSYNALWLKDRGLPHVAEAAMAKWWPPL- 326

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 +A   I   +   G + +  E    +  R+     I  G+ + M   +  
Sbjct: 327 ------LAYETIHACLLIHGHAAWSTELPFEQRLRDVLGLQIGDGTAHIMKNIIAR 376


>gi|116619185|ref|YP_821341.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116222347|gb|ABJ81056.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 388

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 105/356 (29%), Gaps = 34/356 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      G   +  +      +    + +    L  +       +          +  
Sbjct: 50  ELVPAMAELGFLGANLEGYGCAGMSNVEYGLVMQELERIDSGVRSFVSVQGALVMYPIHR 109

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + W P + S                    GLTE   G++ A + +  ++  DG
Sbjct: 110 YGSEEQKQRWLPALQSG-------------KAIGCFGLTEPDFGSNPAGMRTTARRDGDG 156

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   W  +  MSD  I+ A+ E  +  FLV R        G     +  K   R++
Sbjct: 157 WVLNGEKTWITNGSMSDVAIVWARAEEGILGFLVER-----GTPGYTTSDIHGKWSMRAS 211

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339
            T  L   +        L  + G       L  L  A   +    V  A      A  YA
Sbjct: 212 VTSSLSLVDCRVKDADRLPGARGLK---GPLSCLSQARYGIGWGVVGAAMDCYETARQYA 268

Query: 340 RRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             R       +    +++  +A +  +I  A  L+ +     D+ K              
Sbjct: 269 ILRKQFDDRPIASHQLVQEKLAWMITEITKAQLLAVQAGRLKDQKKLEPA-------HIS 321

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           + K     MA      + + +G +G  +E  I RH           G+ +   L +
Sbjct: 322 MLKRNNVWMALECARLSRDLLGANGITDEYPIMRHLCNLETVKTYEGTDHIHALVI 377


>gi|255954461|ref|XP_002567983.1| Pc21g09440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589694|emb|CAP95841.1| Pc21g09440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 425

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 119/326 (36%), Gaps = 26/326 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +         + + P +              K  +   LG+TE   G
Sbjct: 116 WALGCGNSIGGPPIINFGNEEQKRRFLPDML-------------KGKIRFCLGVTEPDAG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A IT+  ++  D        KW +++ +   F   A   G  G   +  L+      
Sbjct: 163 SDVAGITTVAERKGDAYIVNGAKKW-ITNGIFADFCTAAVRTGGSGTHGISALVIPMKAP 221

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  ++++N  G  ++ +  +EF         LLG+ N     + +      L  A  S+
Sbjct: 222 GVICRKIENS-GVHASGSTYIEFDQVEVPVDNLLGEENKGFPVIMNNFNHERLWLACTSL 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A  +A  R   G  LI+  +++   + +A  + +  A   +L    + AK 
Sbjct: 281 RMARVCAEDAYQHAITRETFGKRLIENQIIRSKFSAMARSLDSNYAWMEQLVYIAEIAKK 340

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
              +A    + A + K    +    V  E+ + +GG GY        I +  R+     +
Sbjct: 341 EGTDAGTGGLFANL-KVLAGQTLEKVNRESQQVMGGLGYSKNGRGSRIEQVSRDVRVMVV 399

Query: 443 LLGSGNAM----VLDVLNLLEKGTNL 464
             GS   +    V   +  ++K + L
Sbjct: 400 GGGSEEILSELAVNQEIKAMKKQSKL 425


>gi|292491186|ref|YP_003526625.1| acyl-CoA dehydrogenase domain protein [Nitrosococcus halophilus
           Nc4]
 gi|291579781|gb|ADE14238.1| acyl-CoA dehydrogenase domain protein [Nitrosococcus halophilus
           Nc4]
          Length = 639

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/424 (20%), Positives = 156/424 (36%), Gaps = 40/424 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV-RKQAHKIRAARLYLMAQLEAGHLM 152
            D+ +  P W  +++R    G+   I  + +        ++    +R+       A  + 
Sbjct: 84  IDQEQKIPEW--VVKRLFSMGIMGMIVPKEYGGGGFGITSYNRVLSRIGRRCGSTAVMVS 141

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           +        + L  T    K + P +                       L+E   G+D  
Sbjct: 142 AHQSIGCGAIILFGTEAQKKRFLPSM--------------AKDYLSAFCLSEPNVGSDAG 187

Query: 213 AITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDG 265
              ++ +   DG  Y L+G  KW  S+ +S  F +LA+    + + G     V  L+   
Sbjct: 188 GQETRCELSEDGRFYILNGEKKWASSAALSGLFTVLAKQKIQDPQSGKEKDHVTALICTP 247

Query: 266 SPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
              G+  Y R ++K G R      + F +        L+     ++    L  LD    +
Sbjct: 248 DMEGIDIYSRNRSKCGIRGTWQARIRFRDVKVPKENLLHQEGKGLK--VALTCLDYGRCT 305

Query: 325 VSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           ++   V     +  +A+ +A+ R+  G  L +   ++  IA +A    A  A+ +     
Sbjct: 306 LAAGMVGSATMAYEQAVKWAQYRYQFGCPLAEFEQIQAKIAAMAAYCYAMEAMLYMTTGM 365

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D    R +E         I K +C +M   VI EA++ +GG  Y+ E  I R +R+S  
Sbjct: 366 LD----RHDEDIMLE--TGICKVFCSEMGYRVIDEALQIMGGESYMTENEIERLWRDSRI 419

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499
           N I+ G+   M+  +     K   L E L    E  L   G+ +       + + K    
Sbjct: 420 NLIVEGANEVMLSFIFGYGSK--QLGESLLKIAENPLKHLGQALQLSAELFLGVKKPRPR 477

Query: 500 LARF 503
           + R 
Sbjct: 478 ITRL 481


>gi|322700771|gb|EFY92524.1| glutaryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102]
          Length = 427

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/412 (20%), Positives = 142/412 (34%), Gaps = 54/412 (13%)

Query: 65  VLSCTAQELARMANYN------TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           +L+     +A  A            L AY       D+  + P    +L+     GL  +
Sbjct: 45  LLTEEELAIAETAERYCQERMMPRVLQAY------RDE-HYDP---KILQEMGELGLLGA 94

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D      V   A  +    +  +       +   S      +    T    + + P+ 
Sbjct: 95  NIDGYGCAGVSSVAGGMITRAVERVDSGYRSGMSVQSSLVMGGIYEFGTEEQKQRFLPE- 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSG-HKWFL 235
                       M K  +    GLTE   G+D  ++ S  +      G + LSG   W  
Sbjct: 154 ------------MAKGKLLGAFGLTEPNHGSDPGSMESVARPHPTKKGYFSLSGAKTWIT 201

Query: 236 SSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +SP++D  ++ A++   G++  FLV R  +D  P  L    +K+K G R++ T  ++   
Sbjct: 202 NSPIADVLLVWAKLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDE 259

Query: 294 TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVS-G 346
                          VE +K     L+SA   +       +   +A A  YA  R    G
Sbjct: 260 CPVPEANM----FPDVEGLKGPFSCLNSARYGISMGVMGALEDCIARARTYALERKQFKG 315

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD A D A  T  + ++    DE K   E       M  + K   C 
Sbjct: 316 NPLAKYQLIQKKLADAATDAAYGTLAAIQVGRLKDEGKVTPE-------MISMVKRQNCD 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 369 IALRNARILQEIFGGNAVSDEYHIGRHVANLFVTQTYEGQSDIHSLILGRAI 420


>gi|119508872|ref|ZP_01628024.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414]
 gi|119466401|gb|EAW47286.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414]
          Length = 1205

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 143/397 (36%), Gaps = 34/397 (8%)

Query: 148  AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            A  +   +V     + +  T  +  +  P              +          LTE   
Sbjct: 650  ALFVGLNNVLGVRPILMYGTDALKAELLP-------------ILATGRELAAFALTETGA 696

Query: 208  GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            G +  AI SQ     DG        W  S+  +    +  + E  +  F+V R       
Sbjct: 697  GANPQAIESQAISDGDGWRLRGEKIWSGSAAWAGVINVFVKHESGISGFVVRR-----GT 751

Query: 268  NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
             GL        +G R      +   +   T   LLGD+       +D  +   L  A   
Sbjct: 752  PGLRQGGEALTMGMRGMVQNTVYLEDIPVTSAELLGDVGAGMNVAQDAMMYGRLAIASAC 811

Query: 325  VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            V GM+  +     Y+ RR ++ G L+D PV+   + ++   I A  +L  R+    D   
Sbjct: 812  VGGMQRCVQLMWRYSERRQIATGKLLDHPVVLYRLQELTNAITAVNSLVMRVGKLLDAGD 871

Query: 385  SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +   E   A  ++    YW            ++ +GG GYIE     +  R++    I  
Sbjct: 872  NIPAEVYTACKISAPEFYW------QAADLLVQSLGGRGYIESNIAPQILRDARILRIFE 925

Query: 445  GSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDKGLA- 501
            G    +   +   +L++G  L   L  TL   ++G   K  +  +R+    C +D  +  
Sbjct: 926  GPTETLCGFLGARVLKQGQTLQNFLCQTLGAVEVGQRLKDAVDKIREC---CCDDANIKV 982

Query: 502  -RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
             R++  ++   ++ A L+       A  +++NRF + 
Sbjct: 983  QRWIYHQLGKLATEAILWAVLEEPSATAWVKNRFEEQ 1019


>gi|157147544|ref|YP_001454863.1| crotonobetainyl-CoA dehydrogenase [Citrobacter koseri ATCC BAA-895]
 gi|166991429|sp|A8ALR4|CAIA_CITK8 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|157084749|gb|ABV14427.1| hypothetical protein CKO_03344 [Citrobacter koseri ATCC BAA-895]
          Length = 380

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 125/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLEAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTQEQIDKIMAFQGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPIYTEWFVDMSKPGIKVNKLE-KLGLRMDSCCEINFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 DVVDSAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|161504803|ref|YP_001571915.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081542|sp|A9MQH5|CAIA_SALAR RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|160866150|gb|ABX22773.1| hypothetical protein SARI_02927 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 380

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 124/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ +   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALAEMGIDSLLIPEEHGGLDAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                     G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 EVELDEKDRFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + A   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNAMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|158521564|ref|YP_001529434.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510390|gb|ABW67357.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 381

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/381 (17%), Positives = 126/381 (33%), Gaps = 33/381 (8%)

Query: 85  HAYGPGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
               P  E W+     P  AW A+       G  C+     +        + +  A    
Sbjct: 23  KEITPHVEEWEASHIVPKSAWKAM----GAGGFLCTNAPAEYGGHGLDFLYSVIVAEELA 78

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                       S      +    +  + K + P   S               +   + +
Sbjct: 79  RTNHTGLAAPLHSDIVVPYIVSYGSEEIKKKYIPGCTSG-------------DIITAVAM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPR 260
           TE   G+D+AA+T+   +  D    L+G K F+++ ++   +++A  +         V  
Sbjct: 126 TEPDAGSDVAAMTTIAVEEGDE-VVLNGSKTFITNGINADLVVVAAKDPAAENPHQAVSL 184

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
            + +    G    R   K+G  S  T EL F+N       LLG+ N+    + +      
Sbjct: 185 YIVEDGTPGFTRGRHLEKMGFHSQDTAELFFTNCRIPRKNLLGEKNMGFVMLMEKLQQER 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRH-VSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
           L  A+M+   + + +   + Y +     +G        +   + ++  +         +L
Sbjct: 245 LICAVMAQFAVEIMMEAVVGYCKGTKDTTGKPYSKHQAVNFQLVEMMTEAHIGRVFMEKL 304

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
                E K+   E   A       KYW   +   +  + ++ IG     E   I R +R+
Sbjct: 305 VADHMEGKNVVRETCMA-------KYWHTDLTQTISNQVLDLIGEEATAERSLILRGWRD 357

Query: 437 SPANSILLGSGNAMVLDVLNL 457
                I  G+   M L V  +
Sbjct: 358 LRVLPIFAGTNEIMKLVVGKM 378


>gi|41408936|ref|NP_961772.1| FadE20_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397295|gb|AAS05155.1| FadE20_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 399

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 10/222 (4%)

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           SD  I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++      
Sbjct: 183 SDLVIVVAQTDPDKGAQGFSLLVVERGMEGFERGRHLDKIGLDAQDTAELSFTDVHVPAE 242

Query: 300 GDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L     G +  M+ L    +  A+M+ + M   L + + Y + R   G  +      +
Sbjct: 243 NLLGQEGMGFIYLMQNLPQERISIAVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSR 302

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A +      +         + K  +E+AA A+        +  +    +I   +
Sbjct: 303 FVLAELATEATVVRMMVDEFVRLHLDHKLTAEQAAMAKW-------YSTEKQVHLIDRCL 355

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY+ E  +AR Y ++   +I  G+   M   +   L
Sbjct: 356 QLHGGYGYMREYPVARAYLDARVQTIYGGTTEIMKEIIGRSL 397


>gi|229582640|ref|YP_002841039.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|228013356|gb|ACP49117.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
          Length = 391

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 136/351 (38%), Gaps = 28/351 (7%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G +   +++ +          I    +         +++  S +    +    +    + 
Sbjct: 63  GFNSIPYNKEYGGYELPYIIYIIGMEVLAYGSPALANILWASNSVIDGLHYFGSNLQKEQ 122

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           +               P+ K      + +TE  GG+ I  I ++ +K  D  Y +SG K 
Sbjct: 123 YLK-------------PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGD-QYIISGKKV 168

Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F+++ P++D F++ A     +  F++P  +E     GL   +  +K+G R     E+   
Sbjct: 169 FITNAPIADIFLVFANTSNGITAFIIPSNVE-----GLKIGKPIHKLGLRGAVFSEVSLD 223

Query: 293 NTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N    +   L      +   +   I   + +A +++      L +   Y   R +    L
Sbjct: 224 NVIVSIENRLGEEGEGINIARHIFIGGRIIAAAIALGIGDAVLDQVYQYVISRELGNHKL 283

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           ID  ++K  IA+    +      ++ +A   D+   R E       +A I+K +  +   
Sbjct: 284 IDFQILKEKIANFETILHMGKIYTYYVAYLMDK-MPRQE----LNELASISKLFTTEGVL 338

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +  EA+   GG GY +  +I  ++R+    +I  G+ +   L + + L+K
Sbjct: 339 NIANEAISIFGGYGYTDNLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389


>gi|317507482|ref|ZP_07965208.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
 gi|316254220|gb|EFV13564.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974]
          Length = 611

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 89/517 (17%), Positives = 184/517 (35%), Gaps = 73/517 (14%)

Query: 32  IGMNAYS----SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           I  N +     +D+L      +  S   +++      +      +     + N P    Y
Sbjct: 11  IEFNLFECYGLADTLAKGGYDDLDSDAVRDILRETRKLAEGPLADAWVGPDRNPPV---Y 67

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
            P      + E        ++  +  G      D     +   +A    A    L     
Sbjct: 68  DP---ETFEAELPEELQRAIQLIVESGALQLSVDPELGGIAAPRA-LGWAITEMLWGANA 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +  V  A +   + +P    +W   I +  +D T             + LTE   
Sbjct: 124 AAMFYTWGVPFAQIFYNVASPEQK-EWCKVIAAGNWDAT-------------MVLTEADA 169

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEGRVG------C 255
           G+D+ A  ++  +  DG + + G K F+S   S         ++LA+  G  G       
Sbjct: 170 GSDVGAGRTKATEQPDGTWHIEGVKRFISGATSGDLFENIFHLVLARPVGAKGGTKGLSL 229

Query: 256 FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVS 305
           F VP+   D      G  NG     L++K+G +++ T E+ F        G+L+GD++  
Sbjct: 230 FFVPKYHYDFKTQTRGERNGAFVTNLEHKMGIKASTTCEIAFGQHGVPAVGWLVGDVHNG 289

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353
              + D+     +   I S + +  +   A+ +A+ R                  ++  P
Sbjct: 290 IAQMFDVIENARMTVGIKSTATLSTAYLNALEFAKERVQGSDFTEMMNKDAPRVTIMRHP 349

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR----IMAPITKYWCCK 406
            ++R++ +         AL    A   D A +      +   A      + P+ K    +
Sbjct: 350 EVRRSLLEQKAYAEGLRALYLLTATYQDPAAAERLFGADKDLAYRVNDFLLPLVKGIGSE 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464
              + +AE+++  GGSG++++  I ++ R++  +++  G+     LD     ++   T  
Sbjct: 410 QGYSHLAESLQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQSLDFFFRKIVRDQTAA 469

Query: 465 FEQLFSTLEQDLGSSG-----KKVITILRDSISLCKE 496
              +   ++  + S       K     LR +++  + 
Sbjct: 470 MTHILGQIQAFVDSGAGNGRLKDAREFLRAALADFQA 506


>gi|311747114|ref|ZP_07720899.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
 gi|126578821|gb|EAZ82985.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1]
          Length = 381

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 107/304 (35%), Gaps = 26/304 (8%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +    T      +  K+ S                    G+TE+  G+D  A+   
Sbjct: 96  TQMAINAFGTEDQKNKYLKKLISG--------------TIGAFGITEEGSGSDTYALEMT 141

Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K+  G Y L+G K +++ +P+ +  ++ A    ++G + +   + D +  G     ++
Sbjct: 142 ADKVEGG-YILTGEKHYITLAPICEIAVVFATTNAKLGKWGITAFIVDNTMEGFTVSEVR 200

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333
           +K+G R+     L F N F      L      +      +  +   +    +  M   L 
Sbjct: 201 DKVGMRTTPMGNLYFKNCFVPDENRLGREGSGLSLFSSAMESERGYIFASQIGRMEKQLE 260

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            +I YA  R   G  +     +   IA++ L +  +    +++A          +EAA A
Sbjct: 261 LSIDYANNRQSFGQSIGKNQSISNRIANMRLRLETSKMHLYKVAYLDHSDLPLMKEAAMA 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
                  K +  +       + +   G  G + E  + R  R+     I  G+ +     
Sbjct: 321 -------KLYISEAFVESSLDFIRIFGAKGVVTEYEVERDLRDGLGGLIYSGTSDIQRNI 373

Query: 454 VLNL 457
           +  L
Sbjct: 374 IAKL 377


>gi|29827888|ref|NP_822522.1| glutaryl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29604989|dbj|BAC69057.1| putative glutaryl-CoA dehydrogenase [Streptomyces avermitilis
           MA-4680]
          Length = 403

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 117/360 (32%), Gaps = 28/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASM 161
             L+ +    GL    ++   +P+       +    +         A      S  +   
Sbjct: 60  RELIGKFRDLGLAGVPYEGYGDPLPAGSNLLVGMLSMEYTRTDASSATFFGVHSGLAMYS 119

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           +           W P              M          +TE  GG+D+A  + +  ++
Sbjct: 120 IYRGGDQEQRDRWLPS-------------MAALDTIGAFAMTEPLGGSDVAGGMRTTARR 166

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             +        +W  ++  +D  ++ A+ E           + +    G    +++NKI 
Sbjct: 167 DGENWVLNGAKRWIGNATFADLVVVWARDEADGKVKG---FVVEKGTPGFSPVKIENKIA 223

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R     E+  ++        L       +  +IL       A  ++  M  +   A+ Y
Sbjct: 224 FRIVENAEITLTDVKVPEANRLQRIDSFRDVAEILRATRSGVAWQALGVMLGAYELALGY 283

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +    +++  +     +I A   +  +LA   D    R E ++ A     
Sbjct: 284 AKERKQFGRPIARFQMVQDLLVKSLGNITACWGMLVQLARLQDAGVFRDEHSSLA----- 338

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +       V+A   E  GG+G + +  IAR + ++ A     G+     L V   +
Sbjct: 339 --KAFVTSRMREVVAWCREIFGGNGIVLDYDIARFFADAEAIYSFEGTREMNTLIVGKAV 396


>gi|169627921|ref|YP_001701570.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169239888|emb|CAM60916.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 397

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 115/365 (31%), Gaps = 28/365 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L R+    G+     D          ++ +    L          +      S   + 
Sbjct: 59  RDLARQFGELGVLGMHLDGYGCAGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIH 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    ++W P++ S                    GLTE   G++   + ++ ++   
Sbjct: 119 RYGSEEQKQEWLPQLASGH-------------AIGCFGLTEPDFGSNPGGMRTRARRDGK 165

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                    W  +  ++D   + AQ +  V  F+VP      +  G     +  K+  R+
Sbjct: 166 DWILDGTKMWITNGNLADVATVWAQTDDGVRGFVVPT-----ATKGFAANVIHKKLSLRA 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T EL           +L  + G    +  L          ++   R SL  A+ Y R 
Sbjct: 221 SVTSELVLDGVRLPDSAELPGARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRT 280

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V G  L    + +  +A++ + +     L+  L    D    R E+         + K
Sbjct: 281 REVFGRPLSSYQLSQEKLANMTVQLGMGMLLALHLGRIKDSVGLRPEQ-------VSLGK 333

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
               + A  +  E    +G SG   E S  RH     +     G+    +L +   L  G
Sbjct: 334 LNNVREALNIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRALT-G 392

Query: 462 TNLFE 466
              F 
Sbjct: 393 QAAFR 397


>gi|330914983|ref|XP_003296860.1| hypothetical protein PTT_07068 [Pyrenophora teres f. teres 0-1]
 gi|311330790|gb|EFQ95032.1| hypothetical protein PTT_07068 [Pyrenophora teres f. teres 0-1]
          Length = 416

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/314 (20%), Positives = 114/314 (36%), Gaps = 34/314 (10%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  +   +    +  + +   PK             M K  +    GLTE   G+D  ++
Sbjct: 120 SSLAMGGIEEFGSEELKERLLPK-------------MAKGKLLGCFGLTEPNHGSDPGSM 166

Query: 215 TSQGQKIS--DGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG 269
            +  +      G Y LSG K W  +SP++D  ++ A++E  G++  F+V R   D  P G
Sbjct: 167 ETVAKPHPTKKGYYSLSGSKTWITNSPIADVLLVWAKLESSGKIRGFIVER---DQCPPG 223

Query: 270 -LCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            L    +K+K G R++ T  ++          +  D+    GP   +        A  ++
Sbjct: 224 TLETPPIKHKNGLRASITGMIQLDECPVSEANMFPDVEGLKGPFSCL-NSARYGIAWGTI 282

Query: 326 SGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             +   +     YA  R       +    ++++ +AD   D A     + ++    DE K
Sbjct: 283 GALEDCITRTREYALERRQFKNNPIAKYQLVQKKLADATTDAAYGILAAHQVGRLKDEGK 342

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +       A  M  + K   C  A        E  GG+   +E  I RH           
Sbjct: 343 A-------APEMISMIKRQNCDRALINARTLQEVFGGNAVSDEYGIGRHVANLFVTQTYE 395

Query: 445 GSGNAMVLDVLNLL 458
           G  +   L +   +
Sbjct: 396 GQSDIHSLILGRAI 409


>gi|212530834|ref|XP_002145574.1| acyl-CoA dehydrogenase [Penicillium marneffei ATCC 18224]
 gi|210074972|gb|EEA29059.1| acyl-CoA dehydrogenase [Penicillium marneffei ATCC 18224]
          Length = 434

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 130/380 (34%), Gaps = 34/380 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           P  + W++    P    L    +  G+ H          +             +    + 
Sbjct: 48  PHAQEWEEAGQVPEQVRLHHHQLGFGIVHPLTSPEDAANIALPGGVPREKWDTWCSLIVA 107

Query: 148 -----------AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
                         L + +      +A   TP   + W P + S               +
Sbjct: 108 DELTRCGFVGVVWGLGAGNNIGTPPIARFGTPEQRRRWLPGVASG-------------KI 154

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
              LG+TE   G+D+A IT+  ++  +        KW +++ +   +   A   G  G  
Sbjct: 155 RFCLGITEPDAGSDVANITTTAKREGNHYIVNGAKKW-ITNGIWADYCTAAVRTGGPGRK 213

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
            V  L+      G+  +R+ N  G  ++ +  LEF +       L+G+ N     +    
Sbjct: 214 GVSVLVIPLKEKGVNRKRMHNS-GVNASGSTFLEFDDVRVPAEHLIGNENEGFQIIMSNF 272

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               L  A  ++   RV + +A +YA +R   G  LI +  ++  I    + I  A +  
Sbjct: 273 NPERLSLASAALRLARVCVQDAFNYAVQRETFGAPLITRQAIQSKITKCGMLIEPAQSFL 332

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---I 430
            +L    +  K R   A     M  + K    +     + EA +  GG+GY +      +
Sbjct: 333 EQLVYIIETTKDRP-NAVNIGGMTALLKVMSTRALEKSVREAQQIFGGAGYNKGGKGARV 391

Query: 431 ARHYRESPANSILLGSGNAM 450
            +  R+   + +  GS   M
Sbjct: 392 EQISRDVRVHVVGGGSEEIM 411


>gi|282890214|ref|ZP_06298744.1| hypothetical protein pah_c014o083 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499871|gb|EFB42160.1| hypothetical protein pah_c014o083 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 588

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/336 (19%), Positives = 118/336 (35%), Gaps = 34/336 (10%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + +        + L  T      W P +   E                   LTE+  
Sbjct: 123 ALFINAHQSIGLKALLLFGTEEQKGRWLPSLAIGE-------------DIAAFSLTEESA 169

Query: 208 GTDIAAITSQGQKISD-GIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLL 262
           G+D   +T++     +  +Y ++G K + ++  ++    ++A+ E          V   L
Sbjct: 170 GSDANGVTTRAIFDPERNLYRITGKKQWTTNGSLAKVLTVMAKTEVDTPTGKQDKVTAFL 229

Query: 263 EDGSPNGLCYQRL-KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              S  G     +   K+G R   T  LEF N        L    G ++    L  LD  
Sbjct: 230 VTPSMPGFKVAAVGLEKVGMRGTRTSNLEFDNLEVPAANVLGPVGGGLK--ICLTVLDYG 287

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
             +        A+     AI +A+ R+     L    ++K+ IADI+    A  A ++  
Sbjct: 288 RTTFGASCTGTAKFLVEKAIQHAQTRYQFKRPLASFALVKKKIADISALAFAMDATTYFT 347

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+            + + I K +       ++ E M+  GG  +       R  R+
Sbjct: 348 AGMIDQKIED------FMLESAILKVFASDSLWTILYETMQIFGGRSFFTNYPFERMMRD 401

Query: 437 SPANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFS 470
           +  N I  GS   M   + ++ + + G +L E L  
Sbjct: 402 ARLNMIGEGSNEVMRAFIGLVGMRDVGQHLQEDLKR 437


>gi|229584191|ref|YP_002842692.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019240|gb|ACP54647.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 371

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/382 (20%), Positives = 163/382 (42%), Gaps = 51/382 (13%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ 
Sbjct: 23  AAKIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQG 80

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           E          +  M+ L    R  K++               PM K  +     LTE  
Sbjct: 81  EL---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPS 118

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLL 262
           GG+DI ++ +  +K  +G++ + GHK +++  + +D F+ + +       +  F+VPR  
Sbjct: 119 GGSDIGSMKTFAEKR-NGLWRIKGHKMWITQGIYADIFVTVTRTGSSRHDLSVFIVPRG- 176

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
                N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L 
Sbjct: 177 -----NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLA 230

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            + +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N 
Sbjct: 231 ISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNK 290

Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           FDE  K +    A  ++++ I       +A  ++  +++  GG GY +  +I R YR++ 
Sbjct: 291 FDENSKDKGVYVAMLKLLSAI-------IANEIVDISLQVFGGMGYAKGTTIERIYRDAR 343

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  G+       +   +E+
Sbjct: 344 LLRIGEGTDEVQRHIIAKYIER 365


>gi|325284732|ref|YP_004264195.1| glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
 gi|324316221|gb|ADY27335.1| Glutaryl-CoA dehydrogenase [Deinococcus proteolyticus MRP]
          Length = 452

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/418 (17%), Positives = 144/418 (34%), Gaps = 38/418 (9%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
                    +     + +     +   R+  +   ++       E W + EF      L+
Sbjct: 59  KRELPAADGDFYDYLDTLTDAQVEVAGRVHAFMRAEVMP--VMNEYWSRDEFP---RDLI 113

Query: 108 RRSIHDGLHCSIWD----RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +     L  +IW+    R  +  + +    + A R+ +     A         + + +A
Sbjct: 114 GKMRELNLLRAIWNEDGTRRPDATIMEGIITLEACRVDVST---AVFFGVHGGLAFASIA 170

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKIS 222
           L  +    K W P +                      GLTE  GG+ ++  + +  ++  
Sbjct: 171 LGGSEEQKKRWLPDMLDM-------------RRIGAFGLTEPEGGSQVSEGMRTTCRRDG 217

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG       KW  +S  SD  ++ A+ E           + +    G   ++++ KI  R
Sbjct: 218 DGWVLNGEKKWIGNSTFSDFTVIWARDEETSEVRG---FVVEAGTPGYSVEKIQGKIALR 274

Query: 283 SNATVELEFSNTFGFLLGDLNVSTG--PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +   +        L    G   V D+  L     A   V     +   A+ YA+
Sbjct: 275 MVENGHITLQDCRVADEFRLQAVQGWDTVSDVLKLTRAGVAWQGVGCAMGAYELALAYAQ 334

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  + +  +++  +  +  D+ A   +  RL++  DE +     AA A++     
Sbjct: 335 QRKQFGKRIGEFQLVQNHLVLMLADVTAMLGMVTRLSHLADEGRMDDAHAALAKVHTAA- 393

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                     V+A A E  GG+G + E  +A+H+ ++ A     G+     L V   +
Sbjct: 394 ------RCREVVARAREVFGGNGILLEHGVAKHFADTEAIYSYEGTNEINTLVVGRAV 445


>gi|27375231|ref|NP_766760.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27348367|dbj|BAC45385.1| blr0120 [Bradyrhizobium japonicum USDA 110]
          Length = 211

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 13/219 (5%)

Query: 245 MLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303
           M+A+  G  G   +  ++ +    +G    R  +KIG  ++ T EL F N        L 
Sbjct: 1   MVART-GEAGAKGISLIVVETAGADGYERGRNLDKIGLHASDTSELFFDNVTVPPENLLG 59

Query: 304 V--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G V+ M+ L    L  A+ +V+ M  ++     Y + R   G  L+D       +
Sbjct: 60  KEEGQGFVQLMQQLPQERLALAVGAVASMERAVKLTTEYTKERKAFGKPLMDFQNTAFTL 119

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+   +   A           D    R        + A + KYWC         E ++  
Sbjct: 120 AERKTEAMIARVFV-------DWCIERLVAGDLDTVTASMAKYWCSDKQVQTADECLQLF 172

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY++E  I+R + +S    I  G+   M L +   L
Sbjct: 173 GGYGYMQEYPISRIFIDSRIQKIYGGTNEIMKLLIARSL 211


>gi|302900122|ref|XP_003048198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729130|gb|EEU42485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 427

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 140/412 (33%), Gaps = 54/412 (13%)

Query: 65  VLSCTAQELARMANYN------TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118
           +L+   + +   A            L AY    E +D          +L      GL  +
Sbjct: 45  LLTEEERAIGETAERYCQEHLLPRVLQAY--RDENYDA--------KMLEEMGELGLLGA 94

Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             D      V   A  +    +  +       +   S      +    T    + + P+ 
Sbjct: 95  TIDGYGCAGVSSVAGGLITRAVERVDSGYRSGMSVQSSLVMGGIYEHGTAEQKERFLPE- 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSG-HKWFL 235
                       M K  +    GLTE   G+D  ++ +  +      G Y LSG   W  
Sbjct: 154 ------------MAKGKLLGAFGLTEPNHGSDPGSMETVARPHPTKKGYYLLSGAKTWIT 201

Query: 236 SSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           +SP++D  ++ A++   G++  FLV R  +D     L    +K+K G R++ T  ++  +
Sbjct: 202 NSPIADVLMVWAKLQETGKIRGFLVER--KDCPAGTLETPAIKDKNGLRASITGMIQLDD 259

Query: 294 TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-G 346
                          VE +K     L++A   ++      +   +  A  Y+  R    G
Sbjct: 260 CPVPEENM----FPNVEGLKGPFSCLNNARYGIALGVMGALEDCIDRARTYSLERKQFKG 315

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L    ++++ +AD + D A  T  + ++    DE K+  E       M  + K   C 
Sbjct: 316 NPLAKYQLIQKKLADASTDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCD 368

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 369 AALRNARILQEIFGGNAVSDEYMIGRHVANLFVTQTYEGQSDIHSLILGRAI 420


>gi|225678459|gb|EEH16743.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 442

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 122/365 (33%), Gaps = 29/365 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLE 147
             ER +  E+    H L      DG                 +      +      A L 
Sbjct: 72  WAERDESGEYP---HELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQSGAGLA 128

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +V +   +A   T    +   PK+   EY              I  G+TE   
Sbjct: 129 GAQSIHANVYATQPIAKFATAEQRQRMLPKLIVGEYR-------------ICFGVTEPNT 175

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G D   + ++  K  D         W  S+ ++   ++LA+       +     +     
Sbjct: 176 GLDTLKLRTEAIKDGDSYRVSGQKIWISSAQVAKRMVLLARTTPLEQVKKPSEGLSLFFI 235

Query: 264 D--GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
           D      GL  +++K K+G R+    E+ F N   T   L+G+       V         
Sbjct: 236 DFDKDAPGLDLRKIK-KMGGRAVDANEVFFDNYRITADTLIGNEGDGFKIVLYGMNAERC 294

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    ++L +A  YA+ R V G  +     +   +AD  + + AA   ++    
Sbjct: 295 LLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQGIAHPLADAYMKLEAAKLATYHATK 354

Query: 379 SFDEAKSRSEEAAYAR-IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D +++       A  +     KY   + A      A+   GG GY +E  + R+ RE 
Sbjct: 355 LYDASRTDPTITQKAVGVACNSAKYLAAEAAFTACERAVLAHGGMGYAQEFHVERYLREC 414

Query: 438 PANSI 442
               I
Sbjct: 415 FVPRI 419


>gi|108804581|ref|YP_644518.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108765824|gb|ABG04706.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 401

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 122/380 (32%), Gaps = 38/380 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHL 151
           +++  F       +      G+H   +         + A +   A + L A        +
Sbjct: 53  YEEARFPRELVPEMGALGLLGMHLEGY-----GCAGRSAVEYGLACMELEAGDSGIRTFV 107

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 + S +    +    ++W P++   E                  GLTE   G+D 
Sbjct: 108 SVQGSLAMSAIHRFGSEEQKQEWLPRMARGE-------------AVGCFGLTEPTAGSDP 154

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           A++ +  ++  DG       +W   + +++  ++ A+ +       V   L   +  G  
Sbjct: 155 ASMKTFARRDGDGWVIEGAKRWIGMASIAEVAVIWARTDEEGNP--VRGFLVPTAAQGFS 212

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV-----S 326
              ++ K+  R++   ++E           L  + G          L+ A   +      
Sbjct: 213 ATNIEPKLSMRASIQCDIELRGVRVPAGAMLPGAAGLRA---PFSCLNEARYGIIWGSMG 269

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R     A+ Y+ RR   G  +    + ++ +AD+ ++I     L+  L    D     
Sbjct: 270 AARDCYECALEYSLRREQFGRPVASFQLTQKKLADMVVEIQKGMLLALHLGRMKDAG--- 326

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               A       + K    + A  +  EA   +GG+G   +    RH     +     G+
Sbjct: 327 ----ALKHQQISLGKLNNVREAIKIAREARAILGGNGVTLDYPPLRHANNLESVRTYEGT 382

Query: 447 GNAMVLDVLNLLEKGTNLFE 466
                L +L     G   F 
Sbjct: 383 DEVHTL-ILGQAITGIEAFR 401


>gi|264679087|ref|YP_003278994.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
 gi|262209600|gb|ACY33698.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2]
          Length = 619

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 95/574 (16%), Positives = 187/574 (32%), Gaps = 99/574 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +                           R+A     P          ++D 
Sbjct: 6   TIDFLLYDWLQAEGLTSRPRFADHSRDTFDAVMDTCERIAREKYAPFNRTVDLQEPQFDG 65

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      +         G+  +  D     +      +  A   +  A +  G  M  
Sbjct: 66  EKVILPQCTYEAREAYAESGMLSAAQDYEMGGMQLPYTVEAAANCFFAAASISIGSNM-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ +    + R  K +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 125 TSGNANAIMAHGSERQKKVFAANEFNGRWAGT-------------MALSEPQAGSSLSDI 171

Query: 215 TSQGQKIS--------DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++ +              Y L G+K ++SS   +       ++LA++ G          
Sbjct: 172 ATRAEPDGIEHESDALGPRYRLKGNKMWISSGDHEMTENIVHLVLAKIPGADGKTIPGVK 231

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN------------ 293
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKKLVDAEGRLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVRGQHGGG 291

Query: 294 -------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                    G+L+G        +  M     +   + +          ++ YA+ R   G
Sbjct: 292 LDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAASMLGMAGYHASLEYAQSRPQ-G 350

Query: 347 GIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRS 387
             +              I+   +KR +         A AL+   A   DE     A+  +
Sbjct: 351 RPIGEGGKDASRPQSRIIEHADVKRMLLAQKAYCEGALALNLLCARLVDEQYTGEAQQAA 410

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E      ++ P+ K W  +      + A++  GG GY  + ++ +++R++  N I  G+ 
Sbjct: 411 EARLLLEVLTPVAKSWPSEFCLEANSLAIQIHGGYGYTRDFAVEQYWRDNRLNMIHEGTH 470

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLE---------QDLGSSGKKVITILRDSISLCKE 496
               +D+L   ++  G    + L + +          + LGS   ++   L D  S  K 
Sbjct: 471 GIQAMDLLGRKVVMDGGKGLQLLAARINATIQRAMQYEKLGSYANQLARALADVGSTTKA 530

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
                     + ALA++   +   G   +A ++L
Sbjct: 531 AWATGN---PQEALANAVPYMQAFGHLVLAWIWL 561


>gi|73538346|ref|YP_298713.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121683|gb|AAZ63869.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 388

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 122/359 (33%), Gaps = 31/359 (8%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGH 150
           W+K++    + H   +     G         +        +A  +        A +    
Sbjct: 28  WNKLDVSHTYPHEFYKTLCEGGWLGVAMPEQYGGAGLGILEAALVMQTISESGAGMSGAS 87

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +V   + V +  T      + P             P+         G+TE   G D
Sbjct: 88  AVHMNVFGLNPVVVFGTDEQKARFLP-------------PLIAGKEKACFGVTEPDAGLD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS 266
              + +  +K+  G        W  ++ ++D  ++LA+       +     +        
Sbjct: 135 TTKLKTFARKVEGGYSVTGRKIWISTAQVADRMLLLARTTPLESVKKPTEGLSLFYTKVD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIM 323
            + +  + + +K+G  +  T  L   + F      +G+       +        +  A  
Sbjct: 195 RSKIEIREI-DKMGRSAVDTNMLFIDDLFIPEEDRIGEEGRGFEYILHGLNPERILIAAE 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +LA A  YA+ R V G  +     ++  +A   + + AA  +  + A  +D  
Sbjct: 254 AIGLGRAALAIATQYAKERVVFGRPIGMNQGVQHPLAQAWMQLEAANLMMLKAAARYDAG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +S   EA  A+ +A    +  C+ A       +  +GG GY  E  + R  RES    I
Sbjct: 314 ESCGAEANTAKYLAAEAGHNACQTA-------ILTLGGMGYSREYRVERLLRESYIPRI 365


>gi|325003231|ref|ZP_08124343.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 387

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 123/358 (34%), Gaps = 31/358 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL- 151
           R D+    P      R     G         +       A           +        
Sbjct: 30  RHDREHLFPT--EFYRAFAEGGWLGIGIPTEYGGGGLGVAAAGLLLETIAASGAAMNGCT 87

Query: 152 -MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  SV   ++V    +  + ++  P++ + E             + +  G+TE   GTD
Sbjct: 88  PLHLSVFGINVVTRHGSEELRREVLPRVATGE-------------LQVCFGVTEPDAGTD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSP 267
            + I +   +  DG        W   +  SD  ++  +    +       +   L D   
Sbjct: 135 TSRIRTVAVRDGDGYRISGRKVWISKAAESDRILLATRTAERDPAAPMEGLSIFLVDMDD 194

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  + +  K+G  + A+ E+   +     G L+G  N     + D      +  A  +
Sbjct: 195 PGIATRAIP-KMGRNAVASYEVTLDDVRVPAGRLVGAENEGFRVLLDGLNPERILLAHEA 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R S+  A+ YA  R V G  +     +   +A+    + AA  +  + A  +D  +
Sbjct: 254 LGIGRASVDAAVRYAGEREVFGRPIGQNQGIAFPLAEANARLDAAELVCRQAAWLYDRGE 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + EA  A+ +A                +A++  GG GY +E  + R++RE+    I
Sbjct: 314 RCAREANTAKFLAA-------DAGYRAADQALQTFGGMGYADEYHVNRYFREARLMRI 364


>gi|300788215|ref|YP_003768506.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299797729|gb|ADJ48104.1| glutaryl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 398

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 28/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             L+      GL    ++     +P V      + A  +       A      +  +   
Sbjct: 55  KELIGMFRESGLAGLPYEGYGEHKPAVSHLLTGMMAMEMSRTDASVATFFGVHNGLAMYS 114

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           +A   +      W P+             M          +TE  GG+D+A  + +  ++
Sbjct: 115 IASGGSQEQRDRWLPE-------------MAAMDKIGAFAMTEPLGGSDVAGGMRTTAKR 161

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D        KW  ++  +D  ++ A+             + +    G   ++++ K  
Sbjct: 162 DGDSWILNGAKKWIGNATFADYVVVWARDLDDNHVKG---FVVEKGTPGFVAEKIQGKTA 218

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R     E+  ++        L       +  +IL       A  ++  M  +   A+ Y
Sbjct: 219 FRIVENAEITLTDVRVPEENRLQGINSFRDVAEILRATRGGVAWQALGVMIGAYELALDY 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +    +++  +     +I A+  +  +LA   D    + E ++ A     
Sbjct: 279 AKERTQFGRPIARFQLVQDLLVKSLGNITASWGMLVQLARLQDAGIFQDEHSSLA----- 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +       V+A + E  GG+G + E  +AR + ++ A     G+     L V   +
Sbjct: 334 --KAFVTARMREVVAWSREIFGGNGIVLEYDVARFFADAEAIYSFEGTREMNTLIVGKAI 391


>gi|323474188|gb|ADX84794.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           REY15A]
          Length = 371

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 162/380 (42%), Gaps = 51/380 (13%)

Query: 93  RWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ E 
Sbjct: 25  KIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMTILEEIAKVSGSLALIADAQGEL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +  M+ L    R  K++               PM K  +     LTE  GG
Sbjct: 83  ---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPSGG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLED 264
           +DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR    
Sbjct: 121 SDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG--- 176

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
              N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L  +
Sbjct: 177 ---NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLAIS 232

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N FD
Sbjct: 233 GIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNKFD 292

Query: 382 EA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E  K +    A  ++++ I       +A  ++  +++  GG GY +  +I R YR++   
Sbjct: 293 ENSKDKGVYVAMLKLLSAI-------IANEIVDISLQVFGGMGYAKGTTIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   +E+
Sbjct: 346 RIGEGTDEVQRHIIAKYIER 365


>gi|15609926|ref|NP_217305.1| acyl-CoA dehydrogenase FADE21 [Mycobacterium tuberculosis H37Rv]
 gi|15842327|ref|NP_337364.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31793965|ref|NP_856458.1| acyl-CoA dehydrogenase FADE21 [Mycobacterium bovis AF2122/97]
 gi|121638669|ref|YP_978893.1| putative acyl-CoA dehydrogenase fadE21 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662631|ref|YP_001284154.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium tuberculosis H37Ra]
 gi|148823977|ref|YP_001288731.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis F11]
 gi|167968619|ref|ZP_02550896.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis H37Ra]
 gi|215404759|ref|ZP_03416940.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis 02_1987]
 gi|215412602|ref|ZP_03421330.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215431728|ref|ZP_03429647.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis EAS054]
 gi|215447042|ref|ZP_03433794.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T85]
 gi|218754533|ref|ZP_03533329.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis GM 1503]
 gi|219558797|ref|ZP_03537873.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T17]
 gi|224991161|ref|YP_002645850.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798127|ref|YP_003031128.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 1435]
 gi|254232885|ref|ZP_04926212.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis C]
 gi|254365440|ref|ZP_04981485.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551848|ref|ZP_05142295.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187806|ref|ZP_05765280.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis CPHL_A]
 gi|260201919|ref|ZP_05769410.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T46]
 gi|260206101|ref|ZP_05773592.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis K85]
 gi|289444337|ref|ZP_06434081.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T46]
 gi|289448447|ref|ZP_06438191.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis CPHL_A]
 gi|289553424|ref|ZP_06442634.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 605]
 gi|289570968|ref|ZP_06451195.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T17]
 gi|289575487|ref|ZP_06455714.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis K85]
 gi|289746592|ref|ZP_06505970.1| acyl-CoA dehydrogenase FADE21 [Mycobacterium tuberculosis 02_1987]
 gi|289754895|ref|ZP_06514273.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis EAS054]
 gi|289758916|ref|ZP_06518294.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T85]
 gi|289762963|ref|ZP_06522341.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis GM 1503]
 gi|294994118|ref|ZP_06799809.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis 210]
 gi|297635400|ref|ZP_06953180.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 4207]
 gi|297732398|ref|ZP_06961516.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN R506]
 gi|298526255|ref|ZP_07013664.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777070|ref|ZP_07415407.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu001]
 gi|306780972|ref|ZP_07419309.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu002]
 gi|306785600|ref|ZP_07423922.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu003]
 gi|306790195|ref|ZP_07428517.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu004]
 gi|306794279|ref|ZP_07432581.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu005]
 gi|306798697|ref|ZP_07436999.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu006]
 gi|306804552|ref|ZP_07441220.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu008]
 gi|306807408|ref|ZP_07444076.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu007]
 gi|306968851|ref|ZP_07481512.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu009]
 gi|306973185|ref|ZP_07485846.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu010]
 gi|307080894|ref|ZP_07490064.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu011]
 gi|307085485|ref|ZP_07494598.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu012]
 gi|313659730|ref|ZP_07816610.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2624311|emb|CAA15584.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE21 [Mycobacterium tuberculosis
           H37Rv]
 gi|13882623|gb|AAK47178.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619559|emb|CAD94997.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE21 [Mycobacterium bovis
           AF2122/97]
 gi|121494317|emb|CAL72795.1| Probable acyl-CoA dehydrogenase fadE21 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601944|gb|EAY60954.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis C]
 gi|134150953|gb|EBA42998.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506783|gb|ABQ74592.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium tuberculosis H37Ra]
 gi|148722504|gb|ABR07129.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis F11]
 gi|224774276|dbj|BAH27082.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319630|gb|ACT24233.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 1435]
 gi|289417256|gb|EFD14496.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T46]
 gi|289421405|gb|EFD18606.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis CPHL_A]
 gi|289438056|gb|EFD20549.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 605]
 gi|289539918|gb|EFD44496.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis K85]
 gi|289544722|gb|EFD48370.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T17]
 gi|289687120|gb|EFD54608.1| acyl-CoA dehydrogenase FADE21 [Mycobacterium tuberculosis 02_1987]
 gi|289695482|gb|EFD62911.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis EAS054]
 gi|289710469|gb|EFD74485.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis GM 1503]
 gi|289714480|gb|EFD78492.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T85]
 gi|298496049|gb|EFI31343.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214579|gb|EFO73978.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu001]
 gi|308326225|gb|EFP15076.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu002]
 gi|308329783|gb|EFP18634.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu003]
 gi|308333388|gb|EFP22239.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu004]
 gi|308337412|gb|EFP26263.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu005]
 gi|308341077|gb|EFP29928.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu006]
 gi|308346139|gb|EFP34990.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu007]
 gi|308348882|gb|EFP37733.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu008]
 gi|308353602|gb|EFP42453.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu009]
 gi|308357448|gb|EFP46299.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu010]
 gi|308361397|gb|EFP50248.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu011]
 gi|308365009|gb|EFP53860.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis SUMu012]
 gi|323718635|gb|EGB27799.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis CDC1551A]
 gi|326904404|gb|EGE51337.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis W-148]
 gi|328457900|gb|AEB03323.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis KZN 4207]
          Length = 410

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 114/315 (36%), Gaps = 30/315 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P + + E                   +TE   G+D    + + 
Sbjct: 113 AATIMSRGTLAQQERWVPTLVTLE-------------KIAAWAITEPDSGSDAFGGMKTH 159

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEGRVGCFL----VPRLLEDGSPNGLC 271
             +  +  Y L+GHK F+++   +D  ++ A+  +G          V   + D    GL 
Sbjct: 160 VTRDGED-YILNGHKTFITNGPYADVLVVYAKLADGEPASDWRNRPVLVFVLDAGMPGLT 218

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +   K+G  S+ T EL F N       LL               +  L  A+MS+  +
Sbjct: 219 QGKPFKKMGMMSSPTGELFFDNVRLTPDRLLCAEGDGRDSARANFAVERLGVALMSLGII 278

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                  + YA+ R + G  +    +++  +A + +       + F+        K  + 
Sbjct: 279 NECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMVFQAIERLKAGKQLTL 338

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  GS  
Sbjct: 339 AEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNE 392

Query: 449 AMVLDVLNLLEKGTN 463
             V  +   L     
Sbjct: 393 VQVTHIAKGLLGEPA 407


>gi|296826452|ref|XP_002850979.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238838533|gb|EEQ28195.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 453

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 115/314 (36%), Gaps = 22/314 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +    T +  +++ P++              +  +   LG+TE   G
Sbjct: 138 WGLNGGNSIGCPPIMNFGTEKQKQEYLPRV-------------ARGDIRFCLGITEPDAG 184

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++ I +  +K+ D        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 185 SDVSGIKTVAKKVGDHYIVNGAKKW-ITNGIWADYCTAAVRTGGPGHGGISFLIIPLTAE 243

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  LEF +       L+G  N     +        L  A   +
Sbjct: 244 GVTRRRMFNS-GVHASGSTFLEFDDVEVPAENLIGKENEGFKYIMSNFNPERLSLASACI 302

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A  Y+  R   G  L+   V++  I+ +   I    A   +LA +   ++ 
Sbjct: 303 RLSRVCVEDAFKYSTTRETFGQPLLANQVIRAKISKMGQLIEPCQAFMDQLAYTIKSSEQ 362

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
             ++      M  + K    +    V  EA + +GG+GY    +   I    R+     +
Sbjct: 363 AGQKIDI-GGMTALLKVMSTRCLEKVCREAQQIMGGAGYNKAGKGSRIEAISRDVRVYVV 421

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    + 
Sbjct: 422 GGGSEEILRDLSVR 435


>gi|296392917|ref|YP_003657801.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296180064|gb|ADG96970.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 420

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 114/314 (36%), Gaps = 34/314 (10%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A  +    T    K W P + + E                   +TE   G+D    + + 
Sbjct: 124 AGTIMAKGTLAQKKRWLPGLVTAE-------------KIAAWAITEPDSGSDAFGGMKTT 170

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCY 272
            ++  +  Y L+G K F+++   +D  ++ A+++           V   + D    GL  
Sbjct: 171 VRRDGED-YILNGQKTFITNGPDADVIVVYAKLDDGSALSRRDRKVLAFVLDKGMAGLVQ 229

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAIMS 324
           ++   K+G  S+ T EL F++        L                   ++  +  A +S
Sbjct: 230 EKPFQKMGMNSSPTGELFFTDVRLAPDRLLGESEDHSSGDGRDSARSNFVVERVGVAALS 289

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   L     YA+ R + G  +    +++  +A + +       + FR        K
Sbjct: 290 LGIIEECLRLCADYAKTRTLWGQEIGAFQLIQLKLAQMEVARLNVENMVFRAIELSRAGK 349

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  
Sbjct: 350 QPTLAEASAMKL------YSSQAATEVAMEAVQLFGGNGYMREYRVEQLARDAKSLMIYA 403

Query: 445 GSGNAMVLDVLNLL 458
           GS    V  +   L
Sbjct: 404 GSNEIQVTHIAKGL 417


>gi|315500935|ref|YP_004079822.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315407554|gb|ADU05671.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 618

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/502 (16%), Positives = 175/502 (34%), Gaps = 96/502 (19%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-- 120
           + +           ++ N P            D   F        ++S    +    W  
Sbjct: 46  DRLAREDLAASYSDSDRNPPVF----------DPATFTAPLPESFKKSYKAFMDSEFWRL 95

Query: 121 --DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               +       +A     A L L A        S     A ++ +  T    K WA   
Sbjct: 96  DLPETLGGTNAPRALWWSLAELVLGANAPIWMYASGPSF-AHVLHVEGTEEQKK-WARLF 153

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
             +++  T             + LTE   G+D+ A  ++  +  DG + + G K F++S 
Sbjct: 154 IEKQWGST-------------MVLTEPDAGSDVGAGRTRAIQQPDGSWHIEGVKRFITSG 200

Query: 239 MSD-----AFIMLAQV----------EGRVGCFLVPRLLED------GSPNGLCYQRLKN 277
             D        +LA+              +  F+VP+   D      G  NG+    +++
Sbjct: 201 EHDLSDNIVHYVLARPVGVEGVGGPGTKGLSLFVVPKYHFDAETGELGERNGVYATNVEH 260

Query: 278 KIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           K+G + + T E+ F        G+LLG+ +     +  +     +     +++ +     
Sbjct: 261 KMGLKVSNTCEVTFGEHGVPAKGWLLGEKHDGIRQMFMIIEYARMMVGTKAIATLSTGYL 320

Query: 334 EAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            A+ YA+ R                  +   P ++R++           AL    A+  D
Sbjct: 321 NALEYAKNRVQGADLVQMTDKTAPRVTITHHPDVRRSLLLQKSYAEGLRALVCYTASWQD 380

Query: 382 -----EAKSRSEEAAYARI----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIA 431
                EA    +    A+     + P+ K    + A  ++  E+++  GGSG++++  + 
Sbjct: 381 KVAIAEAAGDEKATKLAKRVNDLLLPLVKGVGSERAYELLGHESLQTYGGSGFLQDYPLE 440

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
           ++ R++  +++  G+     LD+             +F  + +D G +   V   +++ I
Sbjct: 441 QYVRDAKIDTLYEGTTAIQSLDL-------------IFRKIVRDNGKALMAVAAEIQEHI 487

Query: 492 S-------LCKEDKGLARFLTE 506
           +       L +E + L + L E
Sbjct: 488 ASEAGNGQLKEERQALGKALAE 509


>gi|94495216|ref|ZP_01301797.1| butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
 gi|94425482|gb|EAT10502.1| butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58]
          Length = 387

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 135/380 (35%), Gaps = 37/380 (9%)

Query: 90  GGERWDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                +K E H P   AL  +    G H       ++        ++  AR    +    
Sbjct: 28  WARALEKDEHHYP--FALWDKFTEAGFHGVGIAEDYDGQGGDVVMQMLLARELARSLGGL 85

Query: 149 GHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             +   +  +    + L  +      + P I +               +   +  TE  G
Sbjct: 86  AWIWGITSFAGSKSIGLYGSAEQKAKYLPLIATG-------------QLKAAIAFTEPGG 132

Query: 208 GTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLED 264
           GTD+  A+ +   ++  G        W  S+ ++D  +++A+ +         +      
Sbjct: 133 GTDLLGAMATTADRVDGGWRLNGEKIWSSSAHVADYLLVIARSDRGVEKKHQGLTLFWVP 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSAIM 323
               G+    L  K+G RS  +  + F N    L+ D +V   P +    +L  L++  +
Sbjct: 193 TKTPGVTITPLA-KLGMRSMGSCSVHFENA---LVADEHVLGEPDKAWYMLLPTLNNERI 248

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            V    +      L +A+ Y ++R   GGI+     ++  +ADIA        +    A+
Sbjct: 249 MVGAFCLGVIDGVLEDALDYMKQRKAFGGIIGRFQSLQHYVADIATMQKTTELMLHYCAH 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                ++   EA   ++MA        + A A     ++ +GG GY  E  + R++R+S 
Sbjct: 309 KQSRGENVGVEANMLKLMA-------SENANAAADMGIQILGGMGYSAETDMQRYWRDSR 361

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I   +   +   +   L
Sbjct: 362 LWRIGPITNEMVRNGIAESL 381


>gi|145245473|ref|XP_001395004.1| glutaryl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134079704|emb|CAK97130.1| unnamed protein product [Aspergillus niger]
          Length = 428

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/318 (22%), Positives = 116/318 (36%), Gaps = 32/318 (10%)

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +   S  + + +    T  +     P++              K  +A   GLTE   G+
Sbjct: 127 GMSVQSSLAMTAIHDFGTQELKDRLLPEL-------------AKGKLAGCFGLTEPNHGS 173

Query: 210 DIAAITSQGQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLED 264
           D  ++ +  +      G Y LSG K W  +SP+SD  I+ A+    G++  F+V R    
Sbjct: 174 DPGSMETVAREHPTKKGYYLLSGTKTWITNSPISDIMIVWAKLQTTGKIRGFVVER---S 230

Query: 265 GSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSA 321
             P G L    +KNK   R++ T  ++  +             G       L    L  A
Sbjct: 231 QCPPGTLETPAIKNKTALRASITGMIQMDDCPVPAENMFPEVQGLAGPFTCLNSARLGIA 290

Query: 322 IMSVSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
             ++  +   L+ A  YA  R    G  L    ++++ +AD A D A  T  + ++A   
Sbjct: 291 FGAMGALEDCLSRARTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLK 350

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  K   E       M  + K   C  A A      E  GG+   +E  IARH       
Sbjct: 351 DAGKCTPE-------MISMVKRQNCDRALANSRILQEVFGGNATSDEYHIARHVANLFVV 403

Query: 441 SILLGSGNAMVLDVLNLL 458
               G  +   L +   +
Sbjct: 404 QTYEGQSDIHTLILGRAI 421


>gi|302530444|ref|ZP_07282786.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302439339|gb|EFL11155.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 117/360 (32%), Gaps = 22/360 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL+     GL   ++     P V       +AA   L    EA    S    +A  + 
Sbjct: 39  RPLLKAMGSHGLLARLF-----PGVESGQPTRQAAATDLCLLREALATQSTEAETALALQ 93

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            + +  V +    +   R         +          LTE   G+D AA+    +   D
Sbjct: 94  GLGSYPVLQSGLDEQVRRW-----LPAVAAGDAVAAFALTEPDAGSDAAALQLAAEPDGD 148

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G        W  ++P +D + + A+     G   V   +  G   GL      + +    
Sbjct: 149 GWRLTGTKMWISNAPEADFYTVFARTTPDAGSRGVSAFVVPGDRAGLS-GEHLDLVSPHP 207

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T  + F         LLG+ N           L        +V   + +L   + Y  
Sbjct: 208 IGT--VVFDGVRVNRDELLGEENRGFAVAMRTLDLFRPSVGAFAVGMAQAALDATVEYTA 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   GG L+ Q  +   +A++A    A   L +  A ++D  +            A + 
Sbjct: 266 SREAFGGPLVKQQTVAHTLAEMATRTEAGRLLVYAAAAAYDAGEQN------LAGRAAMA 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  + A  V+ +A++  G         +   YRE  A  I  G+       +   L++
Sbjct: 320 KLFATETAQYVVDQAVQLHGARALRRGHLLEHLYREVRAPRIYEGASEIQRTIIARSLQR 379


>gi|25027279|ref|NP_737333.1| putative glutaryl-CoA dehydrogenase precursor [Corynebacterium
           efficiens YS-314]
 gi|259506584|ref|ZP_05749486.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23492560|dbj|BAC17533.1| putative glutaryl-CoA dehydrogenase precursor [Corynebacterium
           efficiens YS-314]
 gi|259165782|gb|EEW50336.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 410

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 127/369 (34%), Gaps = 27/369 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      +L      G+  +       P + +QA  I A  L  +          
Sbjct: 54  WERAEFP---MEVLEPLADLGIVGTFIQGYGCPGLSRQAAGIVARELGRIDGSVNTFFGV 110

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +  +      + W P              M K        LTE   G+D  A
Sbjct: 111 HSNLGMGAIYTLGNEEQRQRWLPD-------------MAKLKKIGAFALTEPNHGSDSVA 157

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLC 271
           + +  ++  D        +W  +   +D  ++ A+   +G V  F+V +  +   P G  
Sbjct: 158 LETSARREGDHWVLNGHKRWIGNGHAADVIVVFARDEADGNVKAFVVEKNEDGTYPEGYQ 217

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMR 329
            + +  K+G R+    ++   N    +   L    S   V  +       ++  +V    
Sbjct: 218 PEVITGKVGKRAILQGDIVIDNLRVPVENRLENCESFAGVNRVLSATRGGASWEAVGHGM 277

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A  YA  R   G  +    +++  +A +  D+     L  R+A   +  +     
Sbjct: 278 AAFELASQYALSREQFGAPIAGYQLVQEKLATMLSDVTQMQLLCTRMAQLQERGE----- 332

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             +   MA + K    + A A   EA +  GG+G + E  IARH  +    S   G+ + 
Sbjct: 333 --FTGSMAAMIKMVTSRKALAACREARDMFGGNGLLLENHIARHLTDMEVVSTYEGTDSI 390

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 391 QALLVGREI 399


>gi|88802897|ref|ZP_01118424.1| Acyl-CoA dehydrogenase, C-terminal domain family protein
           [Polaribacter irgensii 23-P]
 gi|88781755|gb|EAR12933.1| Acyl-CoA dehydrogenase, C-terminal domain family protein
           [Polaribacter irgensii 23-P]
          Length = 388

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 124/361 (34%), Gaps = 32/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
               ++    G +  I    +        ++ +    L              +      +
Sbjct: 48  KDWSKQLAAIGGYGLIIPTEYGGFGMDYLSYGLMMQELERGDTAIRVMSSIQTSLVMYSI 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + + P + S E             +    GLTE   G++ + +    + + 
Sbjct: 108 WQFGSEEQKQKYLPLLASGE-------------LLGSFGLTEPNFGSNASDMHCNFKIVE 154

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D I       W  ++  +D  I+ A+ E      ++   +E  + +     +++NK   R
Sbjct: 155 DKIIINGSKLWIGNASHADIAIVWAKNEQNKVQGII---VETANISNFTTAKIENKWSFR 211

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337
           ++ T EL F N+       L  S    +       L+    +V+   + +A      A+ 
Sbjct: 212 ASNTGELTFDNSALDKGQLLEKSASIKDAY---SCLNIGRYAVAWGSLGIALDCYETALQ 268

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  +    ++++ +A++  +I  A  LS++LA   D  K+   + + A+   
Sbjct: 269 YANERIQFGKPIASYQLIQKKLAEMITEITKAQLLSYQLAVLMDAQKATHAQISMAKRNN 328

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                    MA  V  EA + +GG G   E  I RH           G+    +L     
Sbjct: 329 VA-------MAQEVAKEARQILGGMGITGEYPIMRHLMNLETLITYQGTHEMHLLITGKD 381

Query: 458 L 458
           +
Sbjct: 382 I 382


>gi|225559014|gb|EEH07297.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 469

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 112/314 (35%), Gaps = 22/314 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +           ++PK+              +  +   LG+TE   G
Sbjct: 152 WGLFGGNTIGCPPILNFGNEAQKLKYSPKV-------------SRGEIRFCLGITEPDAG 198

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  ++  +        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 199 SDVANIRTTAKRSGNKYIVNGAKKW-ITNGIWAHYCTAAVRTGGKGRGGISLLIIPLAAK 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R++N  G  ++ +  +EF +       L+G  N     +        L  A   V
Sbjct: 258 GVTRRRMENS-GVNASGSTFIEFDDVEVPAENLIGIENDGFRYIMSNFNPERLGLASSCV 316

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A +YA  R   G  LI   +++   + +   I    A   +LA +   A  
Sbjct: 317 RLSRVCVEDAYNYAITRETFGQPLIANQIIRAKFSKLGRLIEPCQAFLEQLAYTVQVAAK 376

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
             +EA     M  + K    +    V  EA + +GG+GY        I +  R+     +
Sbjct: 377 TGQEAN-VGGMTALLKVMSTRCLEKVCREAQQVMGGAGYNKSGRGARIEQISRDVRVYVV 435

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    + 
Sbjct: 436 GGGSEEILSDLAVR 449


>gi|24216062|ref|NP_713543.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656692|ref|YP_000778.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|6683573|dbj|BAA89258.1| OrfH [Leptospira interrogans serovar icterohaemorrhagiae]
 gi|24197296|gb|AAN50561.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599928|gb|AAS69415.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 391

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 110/291 (37%), Gaps = 17/291 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           +       P+ +  +     +TE     G D   +T+   K  D  Y ++GHKWF +   
Sbjct: 111 DQKEKFYYPLVQGKIRSAFAMTEPPPGAGADPQTLTTNAVKQGDE-YVINGHKWFCTGAN 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-NATVELEFSNTFGF 297
            +D  I++++V            L   +  G    R    +G+       EL+F N    
Sbjct: 170 GADFLIVMSKVSD--SFRRTTLFLVPTNTPGYTMVREIGVMGSHGPGGHCELKFENVRVS 227

Query: 298 L---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LG +       ++      L   +  +   R S+  A  YA +R V G  + D   
Sbjct: 228 ESSILGKVGEGFKWSQERLGPARLTHCMRWIGLARRSMEVAREYALKREVFGQRIADHQG 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++   A+ A++I +   L+ + A++    +        AR +  + K+   +    VI  
Sbjct: 288 IQWMFAESAVEIESGYMLTLKAAHTLRAGED-------ARQIISMAKWQVSETLCKVIDR 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A++  G  GY  +  +   YR++ A  I  G      + +   L  G + F
Sbjct: 341 AIQICGSHGYGRDMKLELFYRDARAARIADGPSEVHKMVIGRNLISGKSDF 391


>gi|223038955|ref|ZP_03609247.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Campylobacter rectus RM3267]
 gi|222879928|gb|EEF15017.1| crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoAreductase)
           [Campylobacter rectus RM3267]
          Length = 378

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 116/287 (40%), Gaps = 13/287 (4%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K  S+E      A            +TE   G+D+ ++ +   K  DG   L+G K F++
Sbjct: 99  KYGSQEQIDKIFAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTKK-DGKVYLNGQKCFIT 157

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           S     +I++   + +    +      D S  G+    L +K+G R ++  E+ F N   
Sbjct: 158 SSAHTPYIVVMARDSQSEKPIFTEWFVDMSKPGIKLTPL-DKLGLRMDSCCEIVFDNVEL 216

Query: 297 F---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               + G+       V++         A  +      +  +A  YA +R   G  +    
Sbjct: 217 EEKDVFGEYGNGFNRVKEEFDAERFLVACTNYGIAYCAFEDAAKYANQRVQFGETIGRTQ 276

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++   A +A+ + A   + +  A   D+  + + E+A         K++C   A AV+ 
Sbjct: 277 LIQEKFAHMAMRLNAMKYMVYSTAWKMDQGLNVTGESAM-------CKFYCANNAFAVVD 329

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +A++ +GG G      ++R +R+   + +  GS    +L +   + K
Sbjct: 330 DAIQVLGGIGVT-GHRVSRFWRDLRVDRLSGGSDEMQILTLGRAILK 375


>gi|295661095|ref|XP_002791103.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226281030|gb|EEH36596.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 435

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 127/360 (35%), Gaps = 28/360 (7%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD     +V  + +++  + +          L   +      +    +     
Sbjct: 89  AGIEPEEWDEFHNLIVVDELNRLGYSGV-------IWGLFGGNGIGCPPIMNFGSEAQRL 141

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++ PK+              +  +   LG+TE   G+D+A I +  ++  +        K
Sbjct: 142 EYMPKV-------------SRGEIRFCLGITEPDAGSDVANIKTTAKRSGNKYIVNGAKK 188

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   +  L+   +  G+  +R++N  G  ++ +  +EF 
Sbjct: 189 W-ITNGLWANYCTAAVRTGGPGRKGISLLIVPLAAKGVTRRRMENS-GVNASGSTFIEFD 246

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A   +   RV   +A +YA +R   G  L
Sbjct: 247 DVEVPVENLIGTENHGFTYIMSNFNPERLSMAAACIRLSRVCAEDAYNYAIKRETFGQPL 306

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I   +++   +     I    A   +LA +   A    ++      M  + K    +   
Sbjct: 307 IANQIIRAKFSKFGELIEPCQAYLEQLAYTLHVAAKTGQQGVDVGGMTALLKVMTTRCLE 366

Query: 410 AVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
            V  EA + +GG+GY +      I +  R+     +  GS   +    +    K  N  +
Sbjct: 367 KVCREAQQVMGGAGYNKSGKGARIEQISRDVRVFVVGGGSREILSDLAVRQEMKNLNDLQ 426


>gi|229578811|ref|YP_002837209.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|229582443|ref|YP_002840842.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238619167|ref|YP_002913992.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|228009525|gb|ACP45287.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228013159|gb|ACP48920.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238380236|gb|ACR41324.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 371

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 162/380 (42%), Gaps = 51/380 (13%)

Query: 93  RWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ E 
Sbjct: 25  KIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQGEL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +  M+ L    R  K++               PM K  +     LTE  GG
Sbjct: 83  ---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPSGG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLED 264
           +DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR    
Sbjct: 121 SDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG--- 176

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
              N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L  +
Sbjct: 177 ---NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLAIS 232

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N FD
Sbjct: 233 GIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNKFD 292

Query: 382 EA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E  K +    A  ++++ I       +A  ++  +++  GG GY +  +I R YR++   
Sbjct: 293 ENSKDKGVYVAMLKLLSAI-------IANEIVDISLQVFGGMGYAKGTTIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   +E+
Sbjct: 346 RIGEGTDEVQRHIIAKYIER 365


>gi|121704720|ref|XP_001270623.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119398769|gb|EAW09197.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 431

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 128/364 (35%), Gaps = 32/364 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 84  RKILEEMGELGLLGANIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIY 143

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              T      + P++ +               +A   GLTE   G+D  ++ +  +    
Sbjct: 144 EFGTQEQKDRFLPQLATG-------------KLAGCFGLTEPNHGSDPGSMETVAREHPT 190

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG K W  +SP+SD  ++ A++E  G++  F+V R      P G L    +KN
Sbjct: 191 KKGYYLLSGSKTWITNSPISDIMLVWAKLESTGKIKGFIVER---SRCPPGTLQTPAIKN 247

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           K   R++ T  ++  +        L    G       L    L  A  ++  +   L  A
Sbjct: 248 KTALRASITGMIQMDDCPVPAENMLPEVEGLKGPFTCLNSARLGIAFGAMGALEDCLDRA 307

Query: 336 IHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
             YA  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E      
Sbjct: 308 RTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDAGKSTPE------ 361

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            M  + K   C  A A      E  GG+   +E  I RH           G  +   L +
Sbjct: 362 -MISMIKRQNCDRALANARVLQEVFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHALIL 420

Query: 455 LNLL 458
              +
Sbjct: 421 GRAI 424


>gi|15805578|ref|NP_294274.1| glutaryl-CoA dehydrogenase [Deinococcus radiodurans R1]
 gi|6458244|gb|AAF10130.1|AE001913_4 glutaryl-CoA dehydrogenase, putative [Deinococcus radiodurans R1]
          Length = 414

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 139/417 (33%), Gaps = 36/417 (8%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALL 107
                    +     + +     +   R+ ++   ++       E W + EF      L+
Sbjct: 21  QRVLPAADGDYYDYLDTLTDSQVEVAGRVHDFMRAEVMPI--MNEYWSRDEFP---RDLI 75

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVAL 164
            +     L  SIW+       +  A  I    +    +++   A         + + +AL
Sbjct: 76  GKMRELNLLRSIWNED--GTRKPDATLIEGVVILEACRVDVSTAVFFGVHGGLATASIAL 133

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISD 223
            +     K W P +                      GLTE  GG+ ++  + +  ++  D
Sbjct: 134 GSDEEQKKRWLPDMLDM-------------KKIGAFGLTEPEGGSQVSEGMRTTCRRDGD 180

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G       KW  +S  SD  ++ A+ E           + +    G   ++++ KI  R 
Sbjct: 181 GWVLNGEKKWIGNSTFSDFTVIWARDEETNEVRG---FVVEAGTPGYDVEKIQGKIALRM 237

Query: 284 NATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
                +   +        L        V  +  L     A   V     +   A+ Y + 
Sbjct: 238 VENGHITLKDCRVADANRLQAVQGWETVSQVLKLTRAGVAWQGVGCAMGAYELALAYTQT 297

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  + +  +++  +  +  D+ A   +  RL++  DE +     AA A++      
Sbjct: 298 RKQFGKRIGEFQLIQSHLTHMLADVTAMLGMVMRLSHIADEGRMDDAHAALAKVHTAA-- 355

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                    V+A A E  GG+G + E  +A+H+ ++ A     G+     L V   +
Sbjct: 356 -----RCREVVARAREVFGGNGILLEHGVAKHFCDTEAIYSYEGTNEINTLVVGRAI 407


>gi|241763898|ref|ZP_04761941.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241366793|gb|EER61225.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 630

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 98/605 (16%), Positives = 197/605 (32%), Gaps = 105/605 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +        +                  R+A     P           +D 
Sbjct: 8   TLDFLLYDWLQAESLTARERFTDHSRETFDAVLDTCERIAREKYAPFNRTVDVQEPHFDG 67

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      +   +     G+  +  D     +         AA  +      +      
Sbjct: 68  EKVILPQCTYDARQAFADSGMLSAAQDYELGGMQLPYV-VESAAGSFFGCASISIGSNLL 126

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ + +  TP   + +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 127 TTGNANAILVHGTPMQQQVFAANEFNGRWAGT-------------MCLSEPQAGSSLSDI 173

Query: 215 TSQGQKI------SDGI-----------YCLSGHKWFLSSPMSD-----AFIMLAQVEG- 251
            ++          +DG+           Y L G+K ++SS   +       ++LA++ G 
Sbjct: 174 ATRAVPDVESAAAADGMVPWDQDALGPRYRLRGNKMWISSGDHELTENIVHLVLAKIPGP 233

Query: 252 ---------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
                     +  F+VP+ L D      G  N +    L +K+G R      L F     
Sbjct: 234 DGKLVPGVKGISLFIVPKKLVDIKGNLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGKY 293

Query: 294 ----------------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
                             G+L+G        +  M     +   + +          ++ 
Sbjct: 294 PVRAEQGGGLDGHGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAATMLGLAGYYASLD 353

Query: 338 YARRRHVSGGIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           YA+ R   G  +              I+   +KR +         A AL+   A   DE 
Sbjct: 354 YAKTRLQ-GRPIGEAGKDASAPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLVDEG 412

Query: 384 KSRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++ + EAA        ++ PI K W  +      + A++  GG GY  +  + +++R++ 
Sbjct: 413 RTGNAEAAAQARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNR 472

Query: 439 ANSILLGSGNAMV--LDVLNLLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCK 495
            N I  G+       L    ++ +G    + L ST+   +  +  +  ++   D ++   
Sbjct: 473 LNMIHEGTHGIQAADLLGRKVVMQGGAGLKLLASTIGATIALARQRPELSAYADQLAQAL 532

Query: 496 EDKGLARFLTEKI-----ALASSAAALYRAGMNDIADVFLE---NRFLDNCHSTHCMLHG 547
            D   A            ALA++   +   G   +A ++L+   +    +   +     G
Sbjct: 533 HDVTAATQAAWSTGNANEALANAVPYMQAFGHMVLAWMWLDVAHSVLARDASLSIAANAG 592

Query: 548 RFNAA 552
           R +AA
Sbjct: 593 RLSAA 597


>gi|154252223|ref|YP_001413047.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156173|gb|ABS63390.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 385

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 127/382 (33%), Gaps = 37/382 (9%)

Query: 90  GGERWDKVEFHPAWH----------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              R+ +    PA+            L+R     GL  +     F               
Sbjct: 15  TAARFARERLAPAYKVRETAGAIDRQLVRDMGELGLVGADLPEKFGAPGLDSVTTGIIIE 74

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                 +  G++        S+VA    P V  +  PKI S E               + 
Sbjct: 75  EISRGDISVGYVQLLGSLMGSIVAAHARPEVADEIVPKICSGE-------------AIVA 121

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFL 257
           LGLTE RGG+D A + ++ +   DG Y LSG K  +S +  +D  ++LA+ +    G   
Sbjct: 122 LGLTEPRGGSDAAHLQTKARADGDG-YVLSGEKTSISMAEQADYILVLARTDESNPGAGG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKI 314
           V   L      G+      + +G+++     + F N      +++G        V     
Sbjct: 181 VSAFLVPLDAPGITCSSFDD-VGSKAVGRGSVFFDNVNVSSRYMVGPEGEGFRKVMQGFD 239

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                  +  ++    SL E   Y   R   G  L     +   +A+    + AA  L +
Sbjct: 240 YSRALIGLQCLAPAFASLEETWKYVTERVAFGNPLAKYQGVTEPLAEAQTLLEAARLLCY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +     D     + EAA  +  AP       K A  VI   +   G  GY  +    +  
Sbjct: 300 KTLWLRDNDLPHTAEAAMCKWWAP-------KTAFQVIHRCLLTHGHGGYSTDLPHQQRL 352

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     I  G+     + +  
Sbjct: 353 RDVMGLQIGDGTEQIQKMIISR 374


>gi|91791080|ref|YP_552030.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
 gi|91700961|gb|ABE47132.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
          Length = 388

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 118/360 (32%), Gaps = 31/360 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL R     GL        +  +                      ++   S    +++ 
Sbjct: 37  RALFREMGSLGLIGVDLPEEYGGMGLSGVTAGIITEEIAYGDFNVSYMQLLSSLMGAIIH 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +P + + W  +I + E               + LGLTE RGG+D A +  + +++ D
Sbjct: 97  ANASPELARTWNSRIVAGE-------------AIVALGLTEPRGGSDAANLQLKARRVGD 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKN---KI 279
                        +  +DA ++ A+  +   G   +   L D +  G+   R  +   KI
Sbjct: 144 EYILSGEKTSITFADQADAMVLFARTGKPEEGARGISAFLVDLNQPGVQRTRFNDVGSKI 203

Query: 280 GNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
             R +    + F +    +   LG        V        +  A+  V+  + S+ E  
Sbjct: 204 IGRGS----VFFDDVRVPVANRLGAEGKGFTQVMQGFDFSRILIALQCVAAAQASIDETW 259

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + R   G  L     +   I +    IAA   L +      D  +  + EAA  + M
Sbjct: 260 EYVKERQTFGAPLAQYQGVSFPIVEFETLIAACRQLCYHGLALRDAGQPHTAEAAMVKWM 319

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            P       K A   I + +   G  G+  +    +  R+     I  G+   M L V  
Sbjct: 320 GP-------KTAFDAIHQCLLTFGHYGWSMDLPHQQRLRDVMGLEIGDGTAQIMKLIVAR 372


>gi|325002463|ref|ZP_08123575.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 400

 Score =  190 bits (484), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 118/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ E       L RR    G+            +   A  +    L+         L  
Sbjct: 53  WERAELP---WNLFRRLPELGIVGEDITGHGAAAMSPLALGLVHMELHRGDGSLGTFLGV 109

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +  +   V +  +    + W P + + E                   LTE   G+D  A
Sbjct: 110 HAGLAMKAVDMCGSEEQKQRWLPSMSTLE-------------RTGAFALTEPDHGSDSVA 156

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   +  D        +W  +  ++D  I+ A+  G          + +    G    
Sbjct: 157 LETTATRDGDHWILNGTKRWIGNGSVADLVIVWARDTGSGDVLG---FVVETPAEGYTAT 213

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            +  K+  R+    ++            L  +    +   +L       A M++      
Sbjct: 214 VIPGKVSLRALWQADITLDGVRVPDDARLAHARTFADCAAVLATTRSTCAWMALGHATAG 273

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA  RH  G  L    ++++ +  +  D+        + A   +  K       
Sbjct: 274 YDAALRYATERHQFGKPLASFQIVQQRLVRMLADLTGMQLYCMQTARLAEAGK------- 326

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +  +A + K    + A ++++EA + +GG+G + E  + RH+ +  A     G+     
Sbjct: 327 LSPTVAGLAKMHNTRTARSILSEARDLLGGNGILLEHHVVRHWADIEAVHTFEGTETMQT 386

Query: 452 LDVLN 456
           L V  
Sbjct: 387 LIVGR 391


>gi|323450619|gb|EGB06499.1| hypothetical protein AURANDRAFT_60185 [Aureococcus anophagefferens]
          Length = 442

 Score =  190 bits (484), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 138/367 (37%), Gaps = 33/367 (8%)

Query: 100 HPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           H A+  A+ R     GL  +  D          A+ + A  +  +       L   S   
Sbjct: 87  HEAFDRAIFREMGALGLLGATIDGYGCAGASSNAYGLIANEVEKVDSAYRSALSVQSSLV 146

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +             P++ + E             +    GLTE   G+D   + S+ 
Sbjct: 147 MHPIHKFGAEETKARLLPQLAAGE-------------LVGCFGLTEPDHGSDPDGMKSKA 193

Query: 219 QKISD-GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +  +  G Y L+G K W  ++P++D  ++ A+++G V  F++ R     +P  L   +++
Sbjct: 194 EFDASTGEYVLNGSKHWITNAPIADVLVVWAKLDGDVRGFVLER--SKLAPGMLETPKIE 251

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K   R++ T  +  ++        L  + G          L+SA   ++   +  AEA 
Sbjct: 252 GKFSLRASETGSIFLADARVGPDAILPKAKGLGA---PFSCLNSARFGIAWGALGAAEAC 308

Query: 337 H-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +     Y   R   G  L    ++++ +AD+A ++A     + R+    D  +   +   
Sbjct: 309 YDVARRYVGERSQFGAPLAANQLIQKKLADMATELALGYGAAQRVGELKDAGQINPQ--- 365

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               M  + K   C  A  V   A + +GG+G  +E  + RH     A +   G+ +   
Sbjct: 366 ----MLSLVKRNSCGKALDVARAARDMLGGNGIQDEYHVIRHCMNLEAVNTYEGTHDVHA 421

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 422 LILGRGI 428


>gi|156741867|ref|YP_001431996.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233195|gb|ABU57978.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 418

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 120/360 (33%), Gaps = 41/360 (11%)

Query: 121 DRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           D+  +P  R                               + V    TP   + +  +  
Sbjct: 69  DKEGKPRPRIGYLMLAHVVEALSWGDAGLYLCTPGGALGGAAVDATGTPEQKERFLKRFG 128

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238
             E                 + +TE   G+D AAI +  +   DG  + L+G K F++  
Sbjct: 129 EGE------------PKWAAMAMTEPHCGSDTAAIRTTARLSEDGTEWILNGEKIFVTGG 176

Query: 239 MSDA------FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  A       ++ A V+   G   +   + +    G+   +L++K G R++ T  + F+
Sbjct: 177 LMAAKESRGFVVVWATVDPSAGRAGMKPFVVEAGTPGMTVTKLEHKHGIRASDTAAIVFN 236

Query: 293 NTFGFLLGDLN---------VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           +        L             G    MK         A  ++   R SL     Y + 
Sbjct: 237 DCRIPYDNILGSPEVVKGDTEHKGFKGAMKTFDATRPLVAASALGIARASLEFTAAYLKE 296

Query: 342 RHVS---GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           R V    G     Q  ++R +  + +   A   L  +     D  +  + EA+ A++ A 
Sbjct: 297 RGVKVRYGVAPHLQTAVERDLIHMEMQHRAGWLLVLKAVTKMDAGEENALEASMAKVKAG 356

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  + A       +E +G  GY  +  + +  R++  N I  G+G    L V   L
Sbjct: 357 QVATYVSQKA-------VELLGPEGYSCKLLVEKWMRDARINDIYEGTGQINRLIVARRL 409


>gi|330824429|ref|YP_004387732.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309801|gb|AEB84216.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 117/364 (32%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQ 145
                R D+    P      R     G         +        +A  +  A       
Sbjct: 25  DAYWLRKDREGGFPE--EFYRAVADAGWLGIAMPEEYGGAGLGITEAAVMMQAIAESGGG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L A   +  ++   + V +  +    +   P +   E                   +TE 
Sbjct: 83  LAAASSVHMNIFGLNPVVVFGSDEQKRRALPPLIRGEQK-------------ACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ ++D  ++LA+             +   
Sbjct: 130 DAGLNTTKLKTRAVRDGDRYLISGRKVWISTAQVADNMLILARTTPVEEVERPTDGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
                 N +  + + +K+G ++  + EL        +   +G+       +        +
Sbjct: 190 YTKLDRNYVDVREI-DKMGRKAVDSNELFIDGLPVPVADRIGEEGKGFHYILHGMNPERV 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             +  ++   R +LA A  YA+ R V    +     ++  +A    ++ AA  ++FR A 
Sbjct: 249 LVSAEAIGIGRAALARATRYAKERVVFDRPIGKNQGIQHPLAISWAELEAAHLMTFRAAT 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +    +A  A+ +A      CC+ A       +   GG GY +E  + R  RE  
Sbjct: 309 LYDRDQPCGSQANAAKYLAAEAAVKCCETA-------ILTHGGFGYAKEYHVERFLREVM 361

Query: 439 ANSI 442
              I
Sbjct: 362 ILRI 365


>gi|317507864|ref|ZP_07965564.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316253837|gb|EFV13207.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 420

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 113/314 (35%), Gaps = 34/314 (10%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A  +    T    K W P++ + E                   +TE   G+D    + + 
Sbjct: 124 AGTIMAKGTLAQQKRWLPQLVTAE-------------KIAAWAITEPDSGSDAFGGMKTT 170

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCY 272
            ++  +  Y L+G K F+++   +D  ++ A+++   G       V   + D    GL  
Sbjct: 171 VRRDGED-YILNGQKTFITNGPDADVIVVYAKLDDGSGTDRRARKVLTFVLDTGMEGLVQ 229

Query: 273 QRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +   K+G  S+ T EL F++               +            +      A +S
Sbjct: 230 AKPFKKMGMNSSPTGELFFTDVRLSKDRLLGETEDHESGDGRESARSNFVTERTGIASLS 289

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +   L     YAR R + G  +    +++  +A + +       + FR        K
Sbjct: 290 LGIIEECLRLCTEYARTRKLWGQEIGSFQLIQLKLAQMEVARINVENMVFRTIEMARAGK 349

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  
Sbjct: 350 QPTLAEASAMKL------YSSQAATEVAMEAVQLFGGNGYMREYRVEQLARDAKSLMIYA 403

Query: 445 GSGNAMVLDVLNLL 458
           GS    V  +   L
Sbjct: 404 GSNEIQVTHIAKGL 417


>gi|118469793|ref|YP_885121.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118171080|gb|ABK71976.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 394

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G    +  R +       A  +     +   Q     ++    + A  ++ +        
Sbjct: 57  GAFGLLVPREYGGSGLSIAQYLPIISEFAKVQGGLRVIVHVHNSFAHALSEIGNDEQKAA 116

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
                 +              + ++   LTE   GT  A + S   ++ D  Y ++G KW
Sbjct: 117 VLHGAATG-------------ANSVAFALTEPGHGTG-ADLGSSAVRMGDE-YEITGEKW 161

Query: 234 -FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
              +S ++  FI+ A+         V   L     +GL  + L   +G +      +  +
Sbjct: 162 LITNSDIATHFIVFAKTAPTE----VSAFLVPRDTDGLSIEPLPETMGCKGGEHGHIRLA 217

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                   L+G        +E    +  +  A  S+     +L  ++  A+ R   G  +
Sbjct: 218 GVRVPATALIGAEGEGNQHLERALEISRVFIAASSLGTSERALELSVARAKERVTFGKPI 277

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
             +  ++R +A++A DI A   L    A+ +D  K    EA+         K +  +   
Sbjct: 278 GSRQAIQRYLAEMATDIYALRGLLADAAHKWDSGKRIPAEASM-------CKLFGLEAVG 330

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            V   A+   GG GY     + R YR++  N +  G+     +   N L  G    +   
Sbjct: 331 RVTDRALLIHGGIGYTRAYPVERLYRDARLNWLEEGTPTIQYMVAANELLSGYVFSDAFD 390

Query: 470 ST 471
           + 
Sbjct: 391 AA 392


>gi|227827022|ref|YP_002828801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|227458817|gb|ACP37503.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
          Length = 371

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 162/380 (42%), Gaps = 51/380 (13%)

Query: 93  RWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ E 
Sbjct: 25  KIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQGEL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +  M+ L    R  K++               PM K  +     LTE  GG
Sbjct: 83  ---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPSGG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLED 264
           +DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR    
Sbjct: 121 SDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG--- 176

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
              N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L  +
Sbjct: 177 ---NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLAIS 232

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N FD
Sbjct: 233 GIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNKFD 292

Query: 382 EA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E  K +    A  ++++ I       +A  ++  +++  GG GY +  +I R YR++   
Sbjct: 293 ENSKDKGVYVAMLKLLSAI-------IANEIVDISLQVFGGMGYAKGTTIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       V   +E+
Sbjct: 346 RIGEGTDEVQRHIVAKYIER 365


>gi|162453558|ref|YP_001615925.1| butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161164140|emb|CAN95445.1| Butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 600

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 100/578 (17%), Positives = 188/578 (32%), Gaps = 76/578 (13%)

Query: 27  QPPLFIGMN----AYS-SDSLLVALIANFPSVVHKELELLG---EYVLSCTAQELARMAN 78
           Q PL    +     Y   D+  +  +  F        +L                 R  +
Sbjct: 5   QNPLLNDRDVEFLLYEVLDATRLCELPYFADHARDTFDLYLQSCRRFAREVLFPTYRPVD 64

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
              P+             +  HPA   + R  +  G+  +    +             A 
Sbjct: 65  EAPPRFEG--------GAITVHPAVRRVFRPMVELGVLTAARPAAVGGQQLPLVVATLAG 116

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
                A L A   +S +  +A ++       +   +  ++++ E+  T            
Sbjct: 117 AYLQAANLSACGYLSLTAGAAHLIETFGDDALRSAFMTRMYAGEWTGT------------ 164

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG-- 251
            + LTE + G+ +A + +   K   G Y + G K F+S    D       + LA++EG  
Sbjct: 165 -MALTEPQAGSSLADVQASAVKTDAGHYLVRGSKIFISGGDHDLTENIVHLTLARIEGAP 223

Query: 252 ----RVGCFLVPRLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD 301
                V  F VP+   +G    PN +    + +K+G R   ++ L F    +  G+L+G 
Sbjct: 224 RGIKGVSLFAVPKRRPEGGQLVPNDVEVAGMIHKLGWRGLPSLSLSFGEKGDCHGYLVGS 283

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----------ILI 350
            +     +  M     +     +V+    +  EA+ YA  R                 +I
Sbjct: 284 PHQGVACMFQMMNEARILVGANAVATASAAYHEALGYALVRPQGRPLGARDPGAPQVPII 343

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404
           +   ++R +      +    AL    A   D A   ++ A          ++ PI K + 
Sbjct: 344 EHADVRRMLLRQKAIVEGGLALVSTTALYADLAAHAADAAERERAQRLLDLLTPIAKTFP 403

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462
            +      A A++  GG GY  E       R+   NSI  G+     LD+L   ++    
Sbjct: 404 AEKGFESNALALQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGNG 463

Query: 463 NLFEQLFSTLEQDLGSSGKKVI-----TILRDSISLCKE-----DKGLARFLTEKIALAS 512
                L   +   +  + +  +       L  +++L  E      +   R  TE++ L  
Sbjct: 464 AALIALGGEIRLTIARAQRAGVEPAWGERLGAALALLGEVTVQLAEAGMRGDTERM-LRH 522

Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFN 550
           SA  +    +  +A  +L                  F 
Sbjct: 523 SADYMELVSVVVVAWQWLAMAAAAREGLARGAAPADFY 560


>gi|83773190|dbj|BAE63317.1| unnamed protein product [Aspergillus oryzae]
          Length = 431

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 34/365 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 84  RKILEEMGELGLLGASIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTAIY 143

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              +  +   + P +              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 144 EFGSQELKDRFLPGL-------------AKGKIAGCFGLTEPNHGSDPGSMETVAREHPT 190

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG K W  +SP+SD  I+ A++E  G++  F+V R   D  P G L    +KN
Sbjct: 191 KKGYYSLSGTKTWITNSPISDILIVWAKLESTGKIRGFVVER---DQCPPGTLETPAIKN 247

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K   R++ T  ++  +       +  D+   TGP   +     L  A  ++  +   L+ 
Sbjct: 248 KTALRASITGMIQMDDCPVPKENMFPDVEGLTGPFTCL-NSARLGIAFGAMGALEDCLSR 306

Query: 335 AIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  YA  R    G  L    ++++ +AD A D A  T  + ++A   DE KS  E     
Sbjct: 307 ARTYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDEGKSTPE----- 361

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K   C  A A      E  GG+   +E  I RH           G  +   L 
Sbjct: 362 --MISMIKRQNCDRALANSRILQEVFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHSLI 419

Query: 454 VLNLL 458
           +   +
Sbjct: 420 LGRAI 424


>gi|121609473|ref|YP_997280.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121554113|gb|ABM58262.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 395

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 120/378 (31%), Gaps = 29/378 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G R D +      H L  ++   GL      + F             A+  +  QL   
Sbjct: 38  RGLRDDPLLPEDVEHELQHKARMIGLWGIDVPQEFGGQALGM-----LAKCVVTEQL--K 90

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           H + P V       L                         P  +      + L+E+  G+
Sbjct: 91  HSIVPFVAPPDSPNLY--------LLNDQCRGAQIDKYLLPYLRGEKKSCIALSEQGAGS 142

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268
           D A I +  ++ +          W   +  +   I++A  +   G    +   L D    
Sbjct: 143 DAAGIRTSAERRNGKWVINGAKMWISHARRAHFMIVVALTDPAKGARGGMTAFLVDRETP 202

Query: 269 GLCYQRLKNKIG-NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           G+        IG        ++ F N     G +LG++  +  P+ +   +  LD A   
Sbjct: 203 GVSIPGSYPMIGEYHP---YQVFFDNVELGDGQVLGEVGQAFIPITNRLGVRRLDIASRC 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  L   I  A  R   G +L D+  ++  IAD   ++       ++LA   D+  
Sbjct: 260 LGLAQRCLQMMIEQANTRKTFGALLADRQAIQWMIADSWQELEMVRLQVYQLAWKIDQG- 318

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                A   R    + K    ++   V   A++  GG G  +E  +    R +    I+ 
Sbjct: 319 -----AQDFRRDGSMVKVQATELIARVADRAIQLFGGMGLSKELPLEYIARSARVLRIVE 373

Query: 445 GSGNAMVLDVLNLLEKGT 462
           G        +   L K  
Sbjct: 374 GPSEVHRWVIARDLLKNG 391


>gi|297183564|gb|ADI19692.1| acyl-CoA dehydrogenases [uncultured Rhizobiales bacterium
           HF4000_48A13]
          Length = 385

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 127/382 (33%), Gaps = 37/382 (9%)

Query: 90  GGERWDKVEFHPAWH----------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              R+ +    PA+            L+R     GL  +     F               
Sbjct: 15  TAARFARERLAPAYKVRETAGAIDRQLVRDMGELGLVGADLPEKFGAPGLDSVTTGIIIE 74

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                 +  G++        S+VA    P V  +  PKI S E               + 
Sbjct: 75  EISRGDISVGYVQLLGSLMGSIVAAHARPEVADEIVPKICSGE-------------AIVA 121

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFL 257
           LGLTE RGG+D A + ++ +   DG Y LSG K  +S +  +D  ++LA+ +    G   
Sbjct: 122 LGLTEPRGGSDAAHLQTKARADGDG-YVLSGEKTSISMAEQADYILVLARTDESNPGAGG 180

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKI 314
           V   L      G+      + +G+++     + F N      +++G        V     
Sbjct: 181 VSAFLVPLDAPGITCSSFDD-VGSKAVGRGSVFFDNVKVSSRYMVGPEGEGFRKVMQGFD 239

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                  +  ++    SL E   Y   R   G  L     +   +A+    + AA  L +
Sbjct: 240 YSRALIGLQCLAPAFASLEETWKYVTERVAFGNPLAKYQGVTEPLAEAQTLLEAARLLCY 299

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           +     D     + EAA  +  AP       K A  VI   +   G  GY  +    +  
Sbjct: 300 KTLWLRDNDLPHTAEAAMCKWWAP-------KTAFQVIHRCLLTHGHGGYSTDLPHQQRL 352

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R+     I  G+     + +  
Sbjct: 353 RDVMGLQIGDGTEQIQKMIISR 374


>gi|226308325|ref|YP_002768285.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187442|dbj|BAH35546.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 409

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 35/316 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           +A  +    T    + W P + +                     +TE   G+D    + S
Sbjct: 112 AAGTIRSRGTLAQKERWLPGLVT-------------FETVGAWAITEPDSGSDAFGGMKS 158

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGC----FLVPRLLEDGSPNGL 270
             ++  D  Y L+G+K F+++   +D  I+ A+++ G          V   + D    GL
Sbjct: 159 YVRRDGDD-YILNGNKTFITNGPYADVMIVYAKLDEGDASVDRRDRKVLAFILDKGMEGL 217

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAI 322
                  K+G  S+ T EL F N        L               ++      +  A 
Sbjct: 218 TQSPPFKKMGMNSSPTGELFFDNVRITKDRLLGETEDSGKSDGKSSAKESFAAERIGIAS 277

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S+  +      +I YA+ R + G  +    +++  +A++ +       + F        
Sbjct: 278 LSLGIINECHRLSIEYAKSRKLWGREIGQFQLIQLKLAEMEVARINVQNMVFNAIERTAA 337

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 338 GDKVSLAEASAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 391

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 392 YAGSNEIQVTHIAKGL 407


>gi|158313445|ref|YP_001505953.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158108850|gb|ABW11047.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 388

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 131/387 (33%), Gaps = 43/387 (11%)

Query: 66  LSCTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
           L   A+ELAR  A+             E+  K EF              G         F
Sbjct: 12  LRAGARELARSFAD---------DYWAEKDQKGEFP---WDFYNAFAEGGWLGIAIPTEF 59

Query: 125 EPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  A             A +    +M  ++   + +    +P + K+  P      
Sbjct: 60  GGGGLGIAEASLLLEEIAASGAGMNGCSIMHLTIFGLNTIVKHGSPDLQKEILPS----- 114

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       S+ +  G+TE   GTD   IT+  +K+  G        W   +  S  
Sbjct: 115 --------AADGSLHVCFGVTEPNAGTDTTRITTFAEKVDGGYRINGRKVWITKAGDSQK 166

Query: 243 FIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            I++A+   R         +   L D     +  + +  K+G  + ++ E+   N F   
Sbjct: 167 MILIARTTKREESARPTDGMSLFLIDIDRKHIDLRAIP-KMGRNAVSSYEVFIDNYFVPE 225

Query: 299 ---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
              +G+       + D      +  A  ++   R SL +A  YA+ R V    +     +
Sbjct: 226 SARIGEEGKGFKYLLDGLNPERILLAHEALGIGRASLEKATRYAKERIVFDRPIGQNQGI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              +A+  + + AA  ++ + A  +D+      EA  A+ +       C         +A
Sbjct: 286 AFPLAEAQIRLDAAELMARKAAWRYDQGLPCGPEANMAKWL-------CADAGFKAADQA 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSI 442
           ++  GG GY  E  + R++RES    +
Sbjct: 339 IQTHGGMGYAREYHVERYFRESRIMRL 365


>gi|331700725|ref|YP_004397684.1| butyryl-CoA dehydrogenase [Lactobacillus buchneri NRRL B-30929]
 gi|329128068|gb|AEB72621.1| Butyryl-CoA dehydrogenase [Lactobacillus buchneri NRRL B-30929]
          Length = 372

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 135/386 (34%), Gaps = 40/386 (10%)

Query: 76  MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135
            AN   P        G       +      L ++ ++ GL      R +           
Sbjct: 19  TANELAPLDMEIDRAGN------YPDG---LFQKVVNTGLLGITLPREYGG--------- 60

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            AA  Y  A      + + + + A  +     T      +  K  + EY P+        
Sbjct: 61  -AAFDYQAAAESLEKMATGNASMAVTLEGHFKTIEQFIKYGNKSLNDEYLPS------AA 113

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
                  +TE  GG++   I ++  K  D            +  +++ + +LA+ E    
Sbjct: 114 KRIFAFSMTEPSGGSNPKGIATRAIKQGDNWVITGDKIMITNGGLAEVYCVLAKTEDDQM 173

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
                  + D    G  + + ++ IG +     E+  ++       LLG +       ++
Sbjct: 174 AV----FVVDKDMPGFKFGKREDFIGLKGVPVGEVVLNHVVVPDSHLLGRIGQGLEIGDN 229

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +    +    M   L  A++Y++ R      L    V +  IADIA+     TA
Sbjct: 230 AHADARVLMGAVLAGIMEHELQTAVNYSKERKAMDTPLYQLQVTQEKIADIAIAKENTTA 289

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L  + A++    K  +E AA A       K +  + A A   +A++ +GG GY  E  + 
Sbjct: 290 LYQKGADNKVANKPYAEVAAMA-------KSYGSRSAVASGDKALQILGGYGYSHEYPVE 342

Query: 432 RHYRESPANSILLGSGNAMVLDVLNL 457
              R++ A  +  G+   M L++ N 
Sbjct: 343 HLIRDARAMELAEGTIEKMNLEITNA 368


>gi|313679599|ref|YP_004057338.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152314|gb|ADR36165.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 386

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 114/375 (30%), Gaps = 31/375 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLM 152
           W++ EF      L+R     G   S     +    V   A+ +    L  +         
Sbjct: 38  WERGEFP---RHLVRAFGEMGFLGSNLPEEYGAAGVSANAYGLIMYELERVDSGLRSFAS 94

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                    +    +    +++ PK+ + E             +    GLTE  GG+D  
Sbjct: 95  VQGALVMYPIYAYGSEEQKREYLPKLAAGE-------------IVGAFGLTEPDGGSDPG 141

Query: 213 A-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             + ++  K  D         W  +  ++   I+ A+ E       +   +      G  
Sbjct: 142 GNMKTKAVKDGDHYVLNGTKMWITNGSIAQIAIVWAKDEEGK----ILGFIVPTDTPGFS 197

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329
              + +K+  R++ T EL   +        L  S      +  L       A   +  + 
Sbjct: 198 APEIHHKMSLRASVTSELVLEDVRVHKDQLLPGSGSLRAPLSCLTQARYGIAWGVLGALE 257

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               EA+ +++ R   G  +  + +++  +  +  +      L+++L    D        
Sbjct: 258 AVYTEALEFSKSRITFGRPIAARQLIQDKLVYMLSEHTKGLLLAWKLGKMKDAG------ 311

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    + K    ++A      A E +G +G   E    RH           G+ + 
Sbjct: 312 -TLKHTHVSLAKRNNVRVALKSARLAREILGANGITVEYHAIRHMLNLETVDTYEGTHDI 370

Query: 450 MVLDVLNLLEKGTNL 464
             L +   +     L
Sbjct: 371 HTLILGRDVTGENAL 385


>gi|256826405|ref|YP_003150365.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
 gi|256689798|gb|ACV07600.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547]
          Length = 617

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 87/538 (16%), Positives = 184/538 (34%), Gaps = 93/538 (17%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
             +           ++   P    + P      +     A+    +            + 
Sbjct: 46  ARLAEGEIAASFTESDRTPP---TFDPETH---EATMPEAFSKSYKAWADAEFWRMNLEP 99

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                +   +     A + L A   A  + S   + A+++    T    +  A  +  R 
Sbjct: 100 ELGGTLATPSVNWAIAEMILGA-NPAVFMFSAGFSFANILFNNGTDEQKQ-LAQLMIDRH 157

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +  T             + LTE   G+D+ A  ++  +  DG + L+G K F+++  +D 
Sbjct: 158 WGAT-------------MVLTEPDAGSDVGAGVTKAVQQEDGTWHLTGVKRFITNGDADF 204

Query: 243 F-----IMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNA 285
           +      +LA+ EG       +  F+VP+   D      G  NG     +++K+G + + 
Sbjct: 205 YENNIHFVLARPEGAGPGTKGLSLFVVPKHHYDPQTGELGERNGAYVTNVEHKMGLKVST 264

Query: 286 TVELEFSN-----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           T EL F         G LLGD++     +  +     +     +++ +      A+ YA+
Sbjct: 265 TCELRFGEDPSTPAVGTLLGDVHDGIAQMFQVIEYARMLVGTKAIATLSTGYLNALEYAK 324

Query: 341 RRHVS------------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            R                  +   P ++R++           AL    A   D A +   
Sbjct: 325 ERVQGPDMLQMGDKTAPRVTITHHPDVRRSLMLQKAYSEGLRALVQYTATFQDTAHAHRA 384

Query: 389 E----------AAYARI----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARH 433
           E          A  A      + P+ K    + A  ++  E+++  GGSG++++  + ++
Sbjct: 385 ETGQEPAADSPAGLAERINDLLLPVVKGVGSERAWVLLGTESLQTFGGSGFLQDYPLEQY 444

Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491
            R++  +++  G+      D     +L         +   +++ L + G + +   R+ +
Sbjct: 445 VRDAKIDTLYEGTTAIQAQDFFFRKILRDQGTALGAVAQEIQEFLQAGGAEQLGEAREQL 504

Query: 492 SLCKEDKGLARFLTEKIALA---SSAAA-----LYRAGMNDIADVFLENRFLDNCHST 541
                +      L + I L    + AA      LY+ G+         +R L      
Sbjct: 505 GKALVE------LQQFIGLLTGWAQAAQGEPRELYKVGLQS-------SRLLMAAGDV 549


>gi|302415341|ref|XP_003005502.1| glutaryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
 gi|261354918|gb|EEY17346.1| glutaryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102]
          Length = 431

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 27/295 (9%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSG-HKW 233
           +  S+E        M K       GLTE   G+D  ++ +  +      G Y LSG   W
Sbjct: 144 EFGSQEQKEKFLPQMAKGKSLGAFGLTEPNHGSDPGSMETVARPHPSKKGYYSLSGAKTW 203

Query: 234 FLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELE 290
             +SP++D  ++ A++   G++  FLV R      P G L    +K+K G R++ T  ++
Sbjct: 204 ITNSPVADVLLVWAKLQETGKIRGFLVER---SKCPAGTLETPPIKDKNGLRASITGMIQ 260

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHV 344
                             VE ++     L+SA   ++      +   +A A  YA  R  
Sbjct: 261 LEECPVPHENM----FPEVEGLRGPFSCLNSARYGIALGVMGALEDCIARARTYALERKQ 316

Query: 345 S-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L    ++++ +AD + D A  T  + ++    DE K+  +       M  + K  
Sbjct: 317 FKGNPLARYQLVQKKLADASTDAAYGTLAAIQVGRLKDEGKATPD-------MISMVKRQ 369

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            C  A        E  GG+   +E +I RH           G  +   L +   +
Sbjct: 370 NCDRALQNARVLQEIFGGNAVSDEYAIGRHVANLFVTQTYEGQSDIHSLILGRAI 424


>gi|254821337|ref|ZP_05226338.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 414

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 132/359 (36%), Gaps = 41/359 (11%)

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVALMTTPRVHKDWAPK 177
           D               A  +  +A++  G L + SV+    A+ +    T    + W P+
Sbjct: 73  DGEASGFGGGAQGSTIAVLVSEIARVSIGLLSTASVSLGLGAATIMSRGTLAQKERWLPE 132

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLS 236
           + + E                   +TE   G+D    + +  ++     Y L+G K F++
Sbjct: 133 LMTLE-------------KIAAWAITEPDSGSDAFGGMKTYVKRDGAD-YILNGQKTFIT 178

Query: 237 SP-MSDAFIMLAQVE-GRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +   +D  ++ A+++ G  G   V +        + D    GL   +   K+G  S+ T 
Sbjct: 179 NGPCADVLVVYAKLDEGDAGPTKVDKRNRPVLVFVLDAGMPGLTQGKPFKKMGMMSSPTG 238

Query: 288 ELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVSGMRVSLAE-----AIHYA 339
           EL F N        L  S    +   +     + A   + ++ M + + +      + YA
Sbjct: 239 ELFFDNVRLSPDRLLGESEQHTDGDGRDSARANFAAERIGIAMMALGIIDECHRLCVDYA 298

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R + G  +    +++  +A + +       + F         K  +   A A  +   
Sbjct: 299 KSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMVFHTIERQQAGKPLTLAEASAIKL--- 355

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              +  + A  V  EA++  GG+GY+ E  + +  R++ +  I  GS    V  +   L
Sbjct: 356 ---YSSEAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEVQVTHIAKGL 411


>gi|297559820|ref|YP_003678794.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844268|gb|ADH66288.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 396

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 116/371 (31%), Gaps = 33/371 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W +    P    L R     G+     +          A+ +    L  +     
Sbjct: 43  PNVAEWFEAGTLPDPRGLARAFGSLGVLGMHLEGYGCGGSSAVAYGLACRELEAVDSGLR 102

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +      + + V    +    ++W P++ + E                  GLTE   G
Sbjct: 103 SFVSVQGSLAMAAVHKFGSEEQKQEWLPRMAAGE-------------AIGCFGLTEPDSG 149

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D  ++ ++ ++            W  +  ++D  ++ A  +  V  F+VP         
Sbjct: 150 SDPGSMRTRARRDGSDWVLDGTKMWITNGSVADVAVVWAATDEGVRGFVVPA-----DTP 204

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV--- 325
           G     +  K+  R++ T EL            L  S G       L  L+ A   +   
Sbjct: 205 GFSANVIHRKLSLRASITSELVLEGVRLPADAVLPGSRGLGS---PLSCLNEARYGIVWG 261

Query: 326 --SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R     A+ YA  R   G  +    + +R +AD+ +D+  A   + R+    DE 
Sbjct: 262 AAGAARACYEAALEYALSREQFGRPIAGFQLTQRKLADMVVDVNQAAMTALRIGRLKDEG 321

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +      ++ ++            A +V        G +G   E  + RH       +  
Sbjct: 322 RCHHNHVSFGKLSCVAAAQRVAAAARSV-------HGANGITLEYPVMRHMLNLETVATY 374

Query: 444 LGSGNAMVLDV 454
            G+     L +
Sbjct: 375 EGTEEIHALSI 385


>gi|56476517|ref|YP_158106.1| cyclohexanecarboxyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312560|emb|CAI07205.1| Cyclohexanecarboxyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 382

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 125/399 (31%), Gaps = 31/399 (7%)

Query: 63  EYVLSCTAQELARMANYNT-PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           ++ LS   Q L   AN     +L       E+ +++E       ++R     G       
Sbjct: 2   DFSLSPEQQALVDTANRFARERLAPGYKAREKAERIE-----REVIRDMGELGFLGPELS 56

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                +                      ++   +     +VA    P + K+W  ++ + 
Sbjct: 57  EEHGGLGVDCLTSGLLLEQISYGDFNVSYVNLLTSLCGQIVAGHARPDIAKEWLGQVIAG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                           I + LTE   G+D A +  +  +  +             +  SD
Sbjct: 117 H-------------KTIAIALTEPSAGSDAARLKLKAVRDGNDFVLNGEKTSISMATQSD 163

Query: 242 AFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             ++ A+          +   L      G+      + IG R      + F +       
Sbjct: 164 VAVVFARTGSEAERARGISAFLVPMDLPGITRTAFDD-IGTRPVGRGSIFFDDVRVSADM 222

Query: 301 DL-NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            L N   G ++ M+          +  +  +R SL E   Y + R   G  + D   +  
Sbjct: 223 MLGNEGQGFIQVMQGFDYSRALIGLQCMGVVRASLDETWRYIQEREAFGKKIGDFQGVTF 282

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A+      A  AL  R     D+    + EAA  +  AP       K+A  +I + + 
Sbjct: 283 PLAEAETMYEACRALCLRTLWLKDQGLPHTSEAAMCKWWAP-------KLACEIIHQCLL 335

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             G  GY  +    + YR+     I  G+ N M + +  
Sbjct: 336 THGHGGYASDYDFGQRYRDVMGLQIGDGTANIMKMIIGR 374


>gi|283783823|ref|YP_003363688.1| crotonobetainyl-CoA dehydrogenase [Citrobacter rodentium ICC168]
 gi|282947277|emb|CBG86822.1| crotonobetainyl-CoA dehydrogenase [Citrobacter rodentium ICC168]
          Length = 380

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 124/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ +   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALAEMGIDSLLIPEEHGGLDAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  + E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTPEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVNKLE-KLGLRMDSCCEINFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|302864642|ref|YP_003833279.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302567501|gb|ADL43703.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 618

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 91/531 (17%), Positives = 182/531 (34%), Gaps = 99/531 (18%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGE--YVLSCTAQELARMANYNTPQLHAYGPGGER 93
            + +D  L         V       LGE   +           ++ N P           
Sbjct: 18  VFGADRTLGQAPFTDLDVDTAR-SFLGEVDRLAREDLAASYSDSDRNPPVF--------- 67

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIW----DRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            D   F        ++S    +    W      S       +A     A L L A     
Sbjct: 68  -DPATFTAPLPESFKKSYKAFMDSEFWRLDLPESLGGTNAPRALWWSLAELVLGANAPIW 126

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
              S     A ++ +  T    K WA     +++  T             + LTE   G+
Sbjct: 127 MYASGPSF-AHVLHVEGTEEQKK-WARLFIDKQWGST-------------MVLTEPDAGS 171

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----------EGRVG 254
           D+ A  ++  +  DG + + G K F++S   D        +LA+              + 
Sbjct: 172 DVGAGRTRAIQQPDGSWHIEGVKRFITSGEHDLSDNIVHYVLARPVGVEGVGGPGTKGLS 231

Query: 255 CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNV 304
            F+VP+   D      G  NG+    +++K+G + + T E+ F        G+LLG+ + 
Sbjct: 232 LFVVPKYHFDAETGELGERNGVYATNVEHKMGLKVSNTCEVTFGEHGVPAKGWLLGEKHD 291

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQ 352
               +  +     +     +++ +      A+ YA+ R                  +   
Sbjct: 292 GIRQMFMIIEYARMLVGTKAIATLSTGYLNALEYAKNRVQGADLVQMTDKTAPRVTITHH 351

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARI----MAPITKYW 403
           P ++R++           AL    A+  D     EA    +    A+     + P+ K  
Sbjct: 352 PDVRRSLLLQKSYAEGLRALVCYTASWQDKVAIAEAAGDEKATKLAKRVNDLLLPLVKGV 411

Query: 404 CCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             + A  ++  E+++  GGSG++++  + ++ R++  +++  G+     LD+        
Sbjct: 412 GSERAYELLGHESLQTYGGSGFLQDYPLEQYVRDAKIDTLYEGTTAIQSLDL-------- 463

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSIS-------LCKEDKGLARFLTE 506
                +F  + +D G +   V   +++ I+       L +E + L + L E
Sbjct: 464 -----IFRKIVRDNGKALMAVAAEIQEHIASEAGNGQLKEERQALGKALAE 509


>gi|121608755|ref|YP_996562.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553395|gb|ABM57544.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 563

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 81/455 (17%), Positives = 157/455 (34%), Gaps = 83/455 (18%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++V      H   R     G+  +  D S   +         A   + +A +  G  +  
Sbjct: 66  ERVILPQCTHDAHRAYAASGMLSAAQDYSIGGMQLPCTVVAAANSFFAIASVSIGSGL-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +V +A+++ +  T R    +A   FS  +  T             + L+E + G+ +  +
Sbjct: 125 TVGNANLLMVHGTRRQQTVFAHNGFSGRFSGT-------------MCLSEPQAGSSLGDV 171

Query: 215 TSQGQKISDGI--------YCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG------- 254
           T++                Y + GHK ++S+   +       ++LA++ G  G       
Sbjct: 172 TTRAVPDGADFASDPLGPRYRIEGHKMWISAGEHELTENIIHLVLAKIPGADGQLLAGTK 231

Query: 255 ---CFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS----------NTF 295
               F+VP+ L D      G  N +    L +K+G R  +   L F              
Sbjct: 232 GLSLFIVPKKLVDTEGQLTGVRNDVALAGLNHKLGWRGTSNTLLNFGEGKYPVQGQAGAI 291

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348
           G+L+G        +  M     +   + +          ++ YAR R   G         
Sbjct: 292 GYLVGQAGRGLHCMFHMMNEARIGVGMAATMLGLAGYYASLDYARNRPQ-GRPVPSQPDG 350

Query: 349 ---------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-- 391
                          +I+   +KR +         A AL    A   D+ ++    AA  
Sbjct: 351 AGGALAKDAAQPPVRIIEHADVKRMLLAQKSYGEGALALDLYCARLVDDMRTADAGAADE 410

Query: 392 ---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                 ++ PI K W  +      + A++  GG GY  +  + +++R++  N I  G+  
Sbjct: 411 ARMLLELLTPIAKSWPSEWCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHG 470

Query: 449 AMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGK 481
              +D+L   L   G    + L   ++  +G +  
Sbjct: 471 MQAMDLLGRKLRMDGGRGLQLLAGRIQASIGRALA 505


>gi|332285936|ref|YP_004417847.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429889|gb|AEC21223.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 388

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 114/347 (32%), Gaps = 30/347 (8%)

Query: 105 ALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              R    +G    C   +     +    A  +  A       + A   +  +V     V
Sbjct: 40  EFFRAMASEGWLSICIPQEYDGSGLGIADAAVMMRAVSESGGGMTAASSIHVNVFGLHPV 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  TP       P             P+ + S      +TE   G +   + ++  +  
Sbjct: 100 VVFGTPEQKARMLP-------------PIAQGSQKACFAVTEPNTGLNTTQLKTRAVRNG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
                     W  ++ ++   +++A+       +     +     D   + +    ++ K
Sbjct: 147 SHYVVNGQKVWISTAQVAQKVLLIARTTPLEDVKKPTHGLSLFYTDLDRSAVTIHEIE-K 205

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G ++  + EL   +       L+G+       +        +  A  +V    ++L  A
Sbjct: 206 MGRKAVDSNELFIQDWKIPADDLIGEEGRGFEYILHGMNPERILIAAEAVGLGMLALNTA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA+ R V    +     ++  +A   +++ AA  +  + A  +D  K     A  A+ 
Sbjct: 266 TEYAKERQVFNRQIGKNQGVQHPLAKCWMNLEAAWLMVLKAAQQYDAGKECGAAANSAKY 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +A    +  C+ A       +   GG GY +E  + R+ RE     I
Sbjct: 326 LAAEAGFDACQTA-------IMTHGGFGYAKEYHVERYLREIMIPRI 365


>gi|257056998|ref|YP_003134830.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
 gi|256586870|gb|ACU98003.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017]
          Length = 402

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             +   + +TE   G+D AAIT+   K  D  Y L+G K F++S   +DA ++ A ++  
Sbjct: 126 GKLWAAMAITEPGCGSDSAAITTTATKDGDD-YILNGEKIFVTSGERADAVVVWATLDKS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-------VS 305
            G   +   + +    G    RL++K+G R++ T  L F N        L          
Sbjct: 185 KGRAAIKSFVVEKGTPGFEVVRLEHKLGIRASDTAVLRFDNCRVPKENLLGSPEIDTKKG 244

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADI 362
              V           A M++   R +L E         +        + Q        ++
Sbjct: 245 FAGVMQTFDNTRPLVAAMAIGVARAALEETRKLLAEAGIEVDYDKPAMAQHAAAATFLEL 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA   +   A   D  K  S +A+ A+  A  T          +  + +E  G  
Sbjct: 305 EADYEAAYLTTMEAAWMADNRKPNSLQASMAKAKAGRTV-------VDITLKCVELAGTL 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY EE  + +  R+S    I  G+     L V   L
Sbjct: 358 GYTEESLLEKWARDSKILDIFEGTQQIQQLIVARRL 393


>gi|299533349|ref|ZP_07046732.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298718665|gb|EFI59639.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 619

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 95/574 (16%), Positives = 187/574 (32%), Gaps = 99/574 (17%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA-NYNTPQLHAYGPGGERWD- 95
           + D LL   +                           R+A     P          ++D 
Sbjct: 6   TIDFLLYDWLQAEGLTSRPRFADHSRDTFDAVMDTCERIAREKYAPFNRTVDLQEPQFDG 65

Query: 96  -KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            KV      +         G+  +  D     +      +  A   +  A +  G  M  
Sbjct: 66  EKVILPQCTYEAREAYAESGMLSAAQDYEMGGMQLPYTVEAAANCFFAAASISIGSNM-L 124

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +A+ +    + R  K +A   F+  +  T             + L+E + G+ ++ I
Sbjct: 125 TSGNANAIMAHGSERQKKVFAANEFNGRWAGT-------------MALSEPQAGSSLSDI 171

Query: 215 TSQGQKIS--------DGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG---------- 251
            ++ +              Y L G+K ++SS   +       ++LA++ G          
Sbjct: 172 ATRAEPDGIEHESDALGPRYRLKGNKMWISSGDHEMTENIVHLVLAKIPGADGKTIAGVK 231

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN------------ 293
            +  F+VP+ L D      G  N +    L +K+G R      L F              
Sbjct: 232 GISLFIVPKKLVDAEGRLTGERNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVRGQHGGG 291

Query: 294 -------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
                    G+L+G        +  M     +   + +          ++ YA+ R   G
Sbjct: 292 LDGRGAGAIGYLVGKPGEGLKCMFHMMNEARISIGMAASMLGMAGYHASLEYAQSRPQ-G 350

Query: 347 GIL--------------IDQPVMKRAIADIALDIAAATALSFRLANSFDE-----AKSRS 387
             +              I+   +KR +         A AL+   A   DE     A+  +
Sbjct: 351 RPIGEGGKDASRPQSRIIEHADVKRMLLAQKAYCEGALALNLLCARLVDEQYTGEAQQAA 410

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
           E      ++ P+ K W  +      + A++  GG GY  + ++ +++R++  N I  G+ 
Sbjct: 411 EARLLLEVLTPVAKSWPSEFCLEANSLAIQIHGGYGYTRDFAVEQYWRDNRLNMIHEGTH 470

Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTL---------EQDLGSSGKKVITILRDSISLCKE 496
               +D+L   ++  G    + L + +          + LGS   ++   L D  S  K 
Sbjct: 471 GIQAMDLLGRKVVMDGGKGLQLLAARINATIQRAMQHEKLGSYANQLARALADVGSTTKA 530

Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530
                     + ALA++   +   G   +A ++L
Sbjct: 531 AWATGN---PQEALANAVPYMQAFGHLVLAWIWL 561


>gi|319763658|ref|YP_004127595.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824077|ref|YP_004387380.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118219|gb|ADV00708.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309449|gb|AEB83864.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 120/356 (33%), Gaps = 38/356 (10%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H   H         G                    +  A L++    E G   + S    
Sbjct: 35  HEFPHEFFEAVASGGWLGICMPEDVGGANL----GVTEAALFMRTVAECGGQAAASTIHM 90

Query: 160 SM-----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++     V    T    K W P             P  +        +TE   G D   +
Sbjct: 91  NIFGLQPVVHFGTEEQKKRWLP-------------PFARGENKACFAVTEPDTGLDTTKL 137

Query: 215 TSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNG 269
               QK  +G Y +SG K F+ ++ ++D  ++LA+       +     +           
Sbjct: 138 KVTAQKQPNGDYLISGKKVFISTAQVADHMLILARTTPIEEVKKHSEGLSLFYTKLDRKY 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  + + +K+G  +  T E+   N       L+G+       +        +  A+  V 
Sbjct: 198 VDIREI-DKLGRAAVDTNEMFIDNLPVSKDSLIGEEGKGLSYIFHGMNAERVLVAVEQVG 256

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R  L  A  YA+ R V G  +     ++  +A    ++ AA  + F  A+ +D+ +  
Sbjct: 257 IGRAVLKLATQYAKERIVFGRPIGKNQGVQHPLARSWAELEAANHMIFAAASLYDKGQPC 316

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             EA  A+++A       C+        ++   GG GY +E  + R  RE+    I
Sbjct: 317 GSEANAAKLLASEACMNACQT-------SILTHGGFGYAKEYHVERFMREAWIGYI 365


>gi|213385113|dbj|BAG84241.1| putative L-prolyl-PCP dehydrogenase [Streptomyces griseoviridis]
          Length = 401

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 116/363 (31%), Gaps = 32/363 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM- 165
            + +   G+  S    ++            AA +  + Q       + SV +    +LM 
Sbjct: 49  WQLAGKQGITGSCVPAAYGGSGLDA--VTAAALMEALGQGCTDTGFAFSVGAHLFASLMP 106

Query: 166 ----TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
                T    + W P + S E                  G+TE   G+D   + ++ ++ 
Sbjct: 107 LVEFGTEEQKRRWLPALCSGE-------------RIAAHGITEPEAGSDALNLRTRAERR 153

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            DG     G  +  ++P++D F++ A      G F +   + +    GL      +K G 
Sbjct: 154 EDGYVLNGGKCFTTNAPVADVFVVQAATAPGGGYFGLTAFIVEAGTPGLTVGPPYDKTGL 213

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAEAIHY 338
             +   ++ F +    L   L             +  +        +  M+  L   + Y
Sbjct: 214 HGSPMADVHFEDCHVPLDQVLGGEGAGASVFTSSMKWERTCLFAAYLGTMKRVLDGTLAY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  +     +   I D+ L   +A  + ++ A    +             +AP
Sbjct: 274 VGEREQFGVPIGSNQAVSHRIVDMTLRYESARLMLYKAARGLADGSDDE--------IAP 325

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +     +    +  +A++  G  G +         R++  + I  G+      ++   L
Sbjct: 326 PSPARGERGRLQLGLDAVQLHGALGILTG-EAEALVRDAMPSRIFSGTNEIQKNNIARAL 384

Query: 459 EKG 461
             G
Sbjct: 385 GLG 387


>gi|297161117|gb|ADI10829.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 385

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 111/304 (36%), Gaps = 22/304 (7%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +     P   K   P++ S E             +  G  +TE   G+D+A +T  
Sbjct: 99  CGMPILDFAPPDTRKRLLPRMCSGE-------------LIAGNAMTEPESGSDVARLTVT 145

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            ++++DG        +  + P++D F+  A  + + G   V   + +    GL   +  +
Sbjct: 146 ARRVADGFLLSGTKSFVSNGPVADVFVTYATTDPQAGHLGVTAFVVERGAPGLAVGQPLD 205

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IMSVSGMRVSLAE 334
           K+G  S     + F + F      L          +  +  + +    + +   +  L  
Sbjct: 206 KMGLLSCPAAAVTFDDCFVPDEQVLGAPGQGGAIFQHSMRWERSCLFAVYLGVQQRLLDR 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + + R+R  SG  L +   +   + D+ L + +   L +R  ++ D           A 
Sbjct: 266 CVEHVRQRRQSGKRLAEFQSVSNRVVDMKLRLESGRLLLYRACDALDRDDPD------AS 319

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +   ++K    + A A   +AM+  GG G + E  I    R++   ++  G+       +
Sbjct: 320 LWVSLSKLAVSEAAVASSLDAMQLFGGRGCLREEGIEAAVRDALPTTVFSGTSEIQRQLI 379

Query: 455 LNLL 458
              +
Sbjct: 380 ARSI 383


>gi|303320325|ref|XP_003070162.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109848|gb|EER28017.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 476

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 88/473 (18%), Positives = 170/473 (35%), Gaps = 54/473 (11%)

Query: 13  NQVHQPSDSLFALNQPPLFIGMNA-----YSSDSLLVALIANFPSVVHKELE----LLGE 63
             +  P DS+F   Q       NA     +S    L  L + + +  H+E +        
Sbjct: 19  PSLQWPIDSVFTSKQAASMA-TNAENPIPFSEPPYLCGLPSPYYTDAHREFQKRCRAFLW 77

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWD 121
             L+  A E  R +         +G        +        L R  IHD  G+    WD
Sbjct: 78  ENLNKHAMEWERDSQVPEHVFEIFGKHNMLLPNLPSPLPVDWLKRLDIHDILGVKVEDWD 137

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +  +   +      AR  L        L +        +    + ++ + + P+  + 
Sbjct: 138 LVYTGIYLDEM-----ARSGLHGPPS--SLTAGLAFGIPPIIKFGSEQLKERFLPEFLTC 190

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMS 240
                           + + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ + 
Sbjct: 191 -------------KKRMCIAITEPDAGSDVANITTTAEKTADGKYYIINGTKKWITNGIW 237

Query: 241 DAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
             +  +A   G  G   +  ++    +  G+  +R     G  ++ T  +E  +      
Sbjct: 238 SDYTTMAVRTGGPGASGLSIVVVPLKNYPGVSMRRFYVS-GQTASGTTYIELDDVKVPVE 296

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+  +    +        L  A+      RV+L+ A  Y  +R   G  L+DQPV++
Sbjct: 297 NLIGEEGLGMKYIMTNFNHERLTIAVGVTRQARVALSSAFEYCIKREAFGKTLMDQPVVR 356

Query: 357 RAIADIALDIAAATALS----FRLANS-FDEAKSR-SEEAAYARIMAPITKYWCCKMAPA 410
             +A    ++ +  A      ++L +   DE   R     A A+  A +    C ++A  
Sbjct: 357 HRLAKAGAELESMWAWVEQFLYQLKHMPKDEGDRRLGGLTALAKAKAGMVLNECSQVA-- 414

Query: 411 VIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                +   GG+G         + +  RE     I  GS + ++   +  L K
Sbjct: 415 -----VLLFGGNGLTRTGQGELVEKISREVWGARIPGGSEDVLLDLSIRQLVK 462


>gi|215428151|ref|ZP_03426070.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis T92]
          Length = 221

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 10/226 (4%)

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   SD  I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++  
Sbjct: 1   NGINSDLVIVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVA 60

Query: 296 GFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L     G +  M+ L    +  AIM+ +GM   L + + YA+ R   G  +   
Sbjct: 61  VPAENLLGQEGMGFIYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSF 120

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
              +  +A++A +      +           K  +E+AA A+        +  +    + 
Sbjct: 121 QNSRFLLAELATEATVVRIMVDEFIKLHLAGKLTAEQAAMAKW-------YATEKQVYLN 173

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              ++  GG GY+ E  +AR Y +S   +I  G+   M   +   L
Sbjct: 174 DRCLQLHGGYGYMREYPVARAYLDSRVQTIYGGTTEIMKEIIGRGL 219


>gi|119196911|ref|XP_001249059.1| hypothetical protein CIMG_02830 [Coccidioides immitis RS]
          Length = 399

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 126/369 (34%), Gaps = 37/369 (10%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------ 143
             ER +  E+    H L      DG                    I  A + L       
Sbjct: 29  WAERDETGEYP---HELHAALAKDGWIGIALPEELGGAGL----GISEATMMLHTIAQSG 81

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L     +  +V +   VA   T    +   PK+ + EY                 G+T
Sbjct: 82  AGLAGAQSIHANVYATQPVAKFATEEQRQQMLPKLIAGEYR-------------TCFGVT 128

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLV 258
           E   G +   + +   +  D         W  S+ ++   ++LA+        R    L 
Sbjct: 129 EPNTGLETLKLRTTATRDGDHYRVSGQKIWISSAQVAKKMVLLARTTPIEEVKRPSEGLS 188

Query: 259 PRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
              ++ D +  GL  +++K K+G RS    E+ F N   +   L+G        V     
Sbjct: 189 LFFIDFDKNAPGLDLRKIK-KMGGRSVDANEVFFDNYRVSADTLIGKEGEGFKIVLHGMN 247

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++    V+L +A  YA+ R V G  +     +   +A   +++ AA   ++
Sbjct: 248 AERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQGIAHPLASAYMNLEAAKLATY 307

Query: 375 RLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +D +K  +S       +     K+   + A      A+   GG GY +E  + R+
Sbjct: 308 HAARLYDASKTDKSISQHTVGVACNSAKFLAAEAAFTACERAVLAHGGMGYAQEFHVERY 367

Query: 434 YRESPANSI 442
            RE     I
Sbjct: 368 LRECFVPRI 376


>gi|300245961|gb|ADJ94038.1| putative acyl-CoA dehydrogenase domain-containing protein BbsG
           [Clostridia bacterium enrichment culture clone BF]
          Length = 399

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 125/376 (33%), Gaps = 31/376 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
                 AL+ ++   GL        F  V        +   +  M +      + P   +
Sbjct: 47  TPEQEKALMAKTKELGLWGIEVPEEFGGVDLGA--LAKVIVVEEMNRSIVQFTLPPDAPN 104

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            + +    T   +  +               P    +    L +TE   GTD +AI  + 
Sbjct: 105 LNFLQSCCTKEQYDRYL-------------VPYAMGTKRSALAMTEPNAGTDASAIQMRA 151

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKN 277
              +          W   +   D FI +A  +   G        L D    GL   R  N
Sbjct: 152 NLKNGKWCLNGTKSWISYAQKVDFFITIAVTDKEKGKKGGFTAFLVDKGTPGLRIVRNVN 211

Query: 278 KIG-NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            IG   +    EL + +       +LG++  +  P+++   +  ++ A   +      + 
Sbjct: 212 TIGDMFA---YELVYEDVELEPSQVLGEVGNAFIPLQNRFGVRRMELAARCLGYADRLIQ 268

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAY 392
             I  A  R   G  L D+  ++  I++  +++ AA  + +  A   D+  +   +EAA 
Sbjct: 269 LMIEQANIRTTFGKPLADRQAVQWWISNSTMELHAARLMVYHAAWKVDQGYQDMRKEAAM 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                   K +C +M   +   A++  GG G  +E  I    R      I+ G       
Sbjct: 329 L-------KVYCTEMLSKIADRAIQIHGGMGLSKEMPIEYIARLVRIFRIVEGPSEIHRW 381

Query: 453 DVLNLLEKGTNLFEQL 468
            +   + K    ++ L
Sbjct: 382 LLAREILKDGKPYQTL 397


>gi|229489216|ref|ZP_04383082.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324720|gb|EEN90475.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 427

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 35/316 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           +A  +    T    + W P + +                     +TE   G+D    + S
Sbjct: 130 AAGTIRSRGTLAQKERWLPGLVT-------------FETVGAWAITEPDSGSDAFGGMKS 176

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGC----FLVPRLLEDGSPNGL 270
             ++  D  Y L+G+K F+++   +D  I+ A+++ G          V   + D    GL
Sbjct: 177 YVRRDGDD-YILNGNKTFITNGPYADVMIVYAKLDEGDASVDRRDRKVLAFILDKGMEGL 235

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAI 322
                  K+G  S+ T EL F N        L               ++      +  A 
Sbjct: 236 TQSPPFKKMGMNSSPTGELFFDNVRITKDRLLGETEDSGKSDGKSSAKESFAAERIGIAS 295

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S+  +      +I YA+ R + G  +    +++  +A++ +       + F        
Sbjct: 296 LSLGIINECHRLSIEYAKSRKLWGREIGQFQLIQLKLAEMEVARINVQNMVFNAIERTAA 355

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 356 GDKVSLAEASAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 409

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 410 YAGSNEIQVTHIAKGL 425


>gi|188583967|ref|YP_001927412.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
 gi|179347465|gb|ACB82877.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi
           BJ001]
          Length = 418

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 112/286 (39%), Gaps = 26/286 (9%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-- 249
            +      + L+E   G+D+A + ++  +  D        +W   +  +D   +LA+V  
Sbjct: 136 ARGQWIGSIALSEPTAGSDLAGVQTRAVREGDEWVLTGTKRWAGFAQGADFIEVLARVRD 195

Query: 250 --EGRVGCFLVPRLLEDGSPNGL---CYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-- 302
              G      +   L    P          + +KIG     T EL+           L  
Sbjct: 196 PEPGEPRSAGLEPFLVVKEPGTFPKGMTGTVIDKIGYHGFLTFELKLDGVRVPERDRLTG 255

Query: 303 ----------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                     +     V+    +  + +A  +V   R ++ +   Y + R   G  +   
Sbjct: 256 LYGDEGADGDSGGFASVQRGLNIARVHTAARAVGVARAAVEDCTAYLQEREQFGQPIGQF 315

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             ++ A+AD+A ++A A A   ++A+  DE      E+A  +++A        +MA  V 
Sbjct: 316 QALRFALADMAAEVAQARAYWQQVAHLLDEGLPAESESAGVKLLA-------TEMAVRVT 368

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +AM+  GG+GY  ER I R++R++   +I  G+       + + +
Sbjct: 369 NQAMQLHGGNGYTTERRIERYWRDARLTTIFEGTSEIQRRIISDRM 414


>gi|302503412|ref|XP_003013666.1| hypothetical protein ARB_00113 [Arthroderma benhamiae CBS 112371]
 gi|302655028|ref|XP_003019309.1| hypothetical protein TRV_06653 [Trichophyton verrucosum HKI 0517]
 gi|291177231|gb|EFE33026.1| hypothetical protein ARB_00113 [Arthroderma benhamiae CBS 112371]
 gi|291183024|gb|EFE38664.1| hypothetical protein TRV_06653 [Trichophyton verrucosum HKI 0517]
          Length = 417

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 133/386 (34%), Gaps = 27/386 (6%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W++  F P     +RR   +G    I DRS    +   +     A          
Sbjct: 46  PYAHEWEEQGFVPD--ETVRRFAKNGF--CIIDRSKPEYMGGISLPAGIAPGEWDIFHTL 101

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +      +    T +   ++ P++   E                 LG+TE   G
Sbjct: 102 IVADELNSIGCPPIMNFGTEQQKLEYLPRVARGEIR-------------FCLGVTEPDAG 148

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D++ I +  +K+          KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 149 SDVSGIKTVAKKVGSHYIVNGAKKW-ITNGIWADYCTAAVRTGGPGHGGISFLIIPLTAE 207

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R+ N  G  ++ +  LEF +       L+G  N     +        L  A   +
Sbjct: 208 GVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGKENEGFKYIMSNFNPERLSLASACI 266

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A  Y+  R   G  L+   V++  I+ +   I    A   +LA +   ++ 
Sbjct: 267 RLSRVCVEDAFRYSTVRETFGKPLLANQVIRAKISKMGQLIEPCQAFMDQLAYTIKTSEQ 326

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
              +      M  + K    +    V  EA + +GG+GY    +   I    R+     +
Sbjct: 327 TGRKIDI-GGMTALLKVMSTRCLEKVCREAQQIMGGAGYNKAGKGSRIEAISRDVRVYVV 385

Query: 443 LLGSGNAMV-LDVLNLLEKGTNLFEQ 467
             GS   +  L V   L+    + E 
Sbjct: 386 GGGSEEILRDLSVREELKHMRKVMEA 411


>gi|149378049|ref|ZP_01895772.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
 gi|149357659|gb|EDM46158.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893]
          Length = 402

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 25/279 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
            +    + +TE   G+D AAI +   +  DG Y L+G K ++++   +DA ++ A ++  
Sbjct: 126 GNTWAAMAITEPGAGSDSAAIRTTATEDGDG-YILNGEKIYVTAGERADAVVVWATLDRN 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
            G   +   + +    G+  +RL+ K+G R++ T  + F N        L      V  G
Sbjct: 185 KGRAAIKSFVVEKGTPGMTVERLEKKLGIRASDTAAIRFDNCRVPKENLLGDPDVSVEKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGI-------LIDQPVMKRAI 359
               M+     D+    V+GM + +A  A+   R      GI          QP + R +
Sbjct: 245 FAGAMQTF---DNTRPVVAGMAIGVASAALQKTRELIALTGIDLGYHTQTWTQPAVTREL 301

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  ++ AA  L+ R A   D     S+E       A I K    ++   V    +E  
Sbjct: 302 QLMEAELEAARLLTLRAAWMADNGLPNSKE-------ASIAKAKAGRVGNMVTLRCVELC 354

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G  GY E   + +  R+S    I  G+    +L +   L
Sbjct: 355 GSLGYGETELLEKWARDSKILDIFEGTQQIQLLIIARRL 393


>gi|116203455|ref|XP_001227538.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88175739|gb|EAQ83207.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 527

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 134/414 (32%), Gaps = 52/414 (12%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDR 122
            L    +E                P    WD+ +  PA  +  + RR    GL  + + +
Sbjct: 149 ALRAEIREWIDT---------EIEPNVTEWDEKKQVPAEVYKEMGRRGYLAGLLGTHYQK 199

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFS 180
            +     K     +    + M   +            +++       P + K     +  
Sbjct: 200 DYVQNSIKSVPADKWDLFHEMLLTDELSRTGSGGFVWNVIGGFGIGCPPLVKFGKKPLVD 259

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
           R         +      I L +TE   G+D+A +T + +   DG  Y ++G K ++++ +
Sbjct: 260 R-----ILPGILAGDKRICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGI 314

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
              +   A   G  G                         G  S+ T  + F +      
Sbjct: 315 WCDYFTTAVRTGGPGMNG----------------------GVWSSGTTYITFEDVKVPVE 352

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G  N     +        +   I  +   RV   E++ YA +R   G  LID PV++
Sbjct: 353 NLIGKENQGFRVIMTNFNHERIGIIIQCLRFSRVCYEESVKYASKRRTFGKKLIDHPVIR 412

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC--CKMAPAVIAE 414
             +A +A  I A+      L N   + +   +  A  R+  PI                E
Sbjct: 413 LKLAHMARQIEASYNW---LENIIYQCQKMGDTEAMLRLGGPIASLKAQSTVTFEFCARE 469

Query: 415 AMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A +  GG  Y        + R YR+  A +I  GS   M+   +    K   + 
Sbjct: 470 ASQIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSIRQSMKVAQML 523


>gi|169630030|ref|YP_001703679.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169241997|emb|CAM63025.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
          Length = 422

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 136/377 (36%), Gaps = 40/377 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVT---SA 159
            L   +I  G             +   A ++  A + +  +A +  G L +  V+    A
Sbjct: 66  RLKAAAIAAGEPKPEKRGGASGGLGDLAGQVSMAAVLVSELAGVSIGLLSTIGVSIGLGA 125

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQG 218
           + +    T    + W P++ + E                   +TE   G+D    + +  
Sbjct: 126 ATIMSRGTLAQKERWLPELVTLE-------------KIACWAITEPDAGSDAFGGMKTYV 172

Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCY 272
           ++     Y L+G K F+++   +D  I+ A+++            V   + D    GL  
Sbjct: 173 KRDGAD-YILNGQKTFITNGPDADVLIVYAKLDEDDPTMDRRNRKVLTFVLDSGMPGLTQ 231

Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +   K+G  S+ T EL F N       LLG+     G            +  + VS M 
Sbjct: 232 GKAFKKMGMMSSPTGELFFDNVRITADRLLGETEEHGGGDGRESARANFAAERVGVSLMA 291

Query: 330 VSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           + +        + YA+ R + G  +    +++  +A + +       + F+        K
Sbjct: 292 LGIINECHRRCLDYAKMRTLWGQNIGQFQLIQLKLAKMEVARINVQNMVFQTLEKLQHGK 351

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S   A A  +      +  + A  V  +A++  GG+GY+ E  + +  R++ +  I  
Sbjct: 352 MPSLAEASAIKL------YSSETATDVAMDAVQLFGGNGYMAEYRVEQLARDAKSLMIYA 405

Query: 445 GSGNAMVLDVLNLLEKG 461
           GS    V  +   L  G
Sbjct: 406 GSNEVQVTHIAKGLLAG 422


>gi|315425652|dbj|BAJ47311.1| acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
          Length = 380

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 140/370 (37%), Gaps = 36/370 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVA 163
              R      L   +   ++  + +     + A   L +     A + +  +  S+ ++ 
Sbjct: 33  EFWRECGRRRLPGFLIPATYGGLGKTVGELVEAVIYLTMHGCGTALYPLLSNNMSSLVIN 92

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T +  +   P++ S EY              +GL +TEK  G+D+ +I +   K   
Sbjct: 93  KSGTEKQRQRLLPRLASGEY-------------IMGLSITEKESGSDVLSIKTTAVKQG- 138

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLA-QVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           G Y ++G K ++++      ++LA +             +   + D    GL +  L  K
Sbjct: 139 GKYVINGEKMYVNNFDRATHMLLAARTTPLEHAAKKSLGLTLFVLDMKAGGLSFSELP-K 197

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G     T  +   N       ++G+++     +        +  A ++V     ++  A
Sbjct: 198 MGTNYFRTGVMRLENVEVDEENVVGEVDNGWKALAHALNPDRIVYAAVAVGSALFAIKTA 257

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R V G  +     ++  +A +  +  AA  L+   A  FD  +  S  A  A  
Sbjct: 258 TSYASERKVFGKPIGAYQGIQFPLASLYTETEAARLLTLDAAAKFDRGEDASVAACLA-- 315

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDV 454
                KY+  ++    + +A++ +GG GY++E  + R  R+         SG     L +
Sbjct: 316 -----KYFASEVVFKAVGQAVQVLGGYGYLKESGLERVLRDIYLLR----SGPITQELAL 366

Query: 455 LNLLEKGTNL 464
             + EKG  L
Sbjct: 367 AFIAEKGLGL 376


>gi|33597369|ref|NP_885012.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33573796|emb|CAE38102.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 387

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 120/351 (34%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G       +++          I  A L +       A L     +  ++ 
Sbjct: 39  HEFHQALAQAGWLGIAMPQAYGGAGL----GISDAALMMHTIAATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  T +  + W P             P+         G+TE   G +   + ++
Sbjct: 95  GLHPVVVFGTAQQKQRWLP-------------PLIAGQDKACFGVTEPNTGLNTLKLKTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         W  ++ +++  ++LA+        G   +     D     +    
Sbjct: 142 AVRQGDHYVVTGQKVWISTAQVANKILLLARTTPIEACTGSEGLSLFYTDLDRAAIEVHE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   + +L   N    +   +G+       ++       +  A  +V   R +
Sbjct: 202 IE-KMGRKCVDSNQLFIDNLRIPVEDRIGEEGKGFSYIQHGLNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YAR R V    +     ++  +A   +++ AA  +  + A  +D+ +    EA 
Sbjct: 261 LRKAAGYAREREVFDRPIGKNQGVQHPLARSWMELEAAHLMVQKAAWLYDQQQPCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +     Y  C+ A       +   GG GY +E  + R+ RE+    +
Sbjct: 321 SAKFLGAEACYAACENA-------IFTHGGMGYAKEYHVERYLREAWIPRL 364


>gi|163790521|ref|ZP_02184951.1| butyryl-CoA dehydrogenase [Carnobacterium sp. AT7]
 gi|159874274|gb|EDP68348.1| butyryl-CoA dehydrogenase [Carnobacterium sp. AT7]
          Length = 376

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 120/366 (32%), Gaps = 31/366 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            DK   +P   +L  + +  G         +           +    + +        + 
Sbjct: 31  IDKERNYPE--SLWNKLVKIGFLGLTIPEEYGGAGFDVIASSQTVYDFAVRNASVAFTLE 88

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   V    TP + + + P+   R                 G   TE +GG+++  
Sbjct: 89  GHYKTVDQVMKYATPELKEKYLPQANHR---------------VFGFSSTEPQGGSNVMG 133

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
            T+   K  D            +  ++  + +L +         +   L D    G  + 
Sbjct: 134 FTASAVKDGDKWILNGNKTMITNGGLAQVYCVLLKTAPNE----LSCFLVDEDMPGFKHG 189

Query: 274 RLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           + +  IG       E+   N       LLG +       ++      +    ++      
Sbjct: 190 KREEFIGMTGTPVGEIFLENVTVTEEHLLGKIGQGVEIGDNAHYDARISMGAIAAGITEH 249

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L  A+ YA++R      +I    ++  I +IA+    A  L    A    E KS ++  
Sbjct: 250 ALTIAVDYAKKRDAIDTPIIQLHSIQTKITEIAIAKENAQLLYQEAAKLKIEGKSYAK-- 307

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                ++ + K +  + A      A++ +GG GY  E  +    R++ A  +  GS   M
Sbjct: 308 -----VSTMAKSYGSRAAVIAADHALQVLGGYGYSREYPVEHLIRDARALQLAEGSLEKM 362

Query: 451 VLDVLN 456
           ++++  
Sbjct: 363 MIEIAK 368


>gi|325527783|gb|EGD05056.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. TJI49]
          Length = 380

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 122/363 (33%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    +    G    +              + + A  L       A  ++ P+ T+ +++
Sbjct: 40  YEAYEKIAKQGWLGILIPEEEGGSGGDIFDYSLMAEGLGKFGFDFACSVLVPTFTAMNII 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   K +               P     +   + ++E   G+D A   ++ ++ +
Sbjct: 100 K-FGTPEQKKKYV-------------QPFIDGKIRFSVSISEPDAGSDAANTKTRARRDT 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G + +SG K + S   +   ++  L +         +  LL      G+   +L   + 
Sbjct: 146 NGDWIVSGQKLWCSGAAAKDTVIAMLVRTSTDDKHKGLSVLLIPNDTPGMVINKLPT-LS 204

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T E+           LLG+       + +   L     A       + ++  A  
Sbjct: 205 RHATGTTEIFLDEVRVPADALLGEEGQGWRIITEHLELERCAVAAAYTGNAQQAVNTATR 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R      L D  V++  +AD    + AA  L +R A    +    S E + A    
Sbjct: 265 YAHDRIQFDHQLYDFQVIRHMLADCQTKVDAARLLCYRAARMAADHVPCSREVSMA---- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +         M+ +GG   + E  + R+ RES  ++I  G+       +   
Sbjct: 321 ---KLYGSETLKECALAGMQILGGYANLPEADMERYLRESIQSTIGGGTSQIQRTIIAKS 377

Query: 458 LEK 460
           + +
Sbjct: 378 MRQ 380


>gi|226362235|ref|YP_002780013.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226240720|dbj|BAH51068.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 387

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 63/355 (17%), Positives = 129/355 (36%), Gaps = 29/355 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--KQAHKIRAARLYLMAQLEAGHLM 152
           DK   H      ++     G   ++    +  +    K+A  +        A +  G  +
Sbjct: 30  DKDNKHEYPWEFVKAFAAGGWLGAMIPEEYGGIGLGLKEAAVMMGEISASGAGMSGGSAV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              V   + +    +  + +++ PK+ S E               +  G+TE   G D +
Sbjct: 90  HFYVFPPAPIVRYGSEEMKREYLPKLASGEM-------------LMAFGVTEPTAGVDTS 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNG 269
            I ++  KI+ G        +  ++  +   ++LA+   R        +     +  P  
Sbjct: 137 RIKTKATKINGGWVINGQKVFITNAKNAQRILLLARTSPRRDDKPLHGMTLFFANMDPER 196

Query: 270 LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  + + +K+G  +  T EL   N       ++G+++     + D      +  A+  + 
Sbjct: 197 ITIREI-DKLGRAAIDTNELFIDNLEVADHEVVGEVDKGFYYLLDGLNPERICVAMEGIG 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L  A +YA  R V    +     +   +AD  + + AA  ++ + A+ FD  +  
Sbjct: 256 LGRAALDLATNYANERIVFDRPIGKNQAVAHPLADSWIRLEAAEGMAMKAADLFDAKQPC 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             EAA A+ +     +  C  A +         GG  Y +E  I R +RE     
Sbjct: 316 GAEAAAAKYLGAEAGFDACDRAFS-------TFGGYAYAKEYHIERLWREVRLLR 363


>gi|54026323|ref|YP_120565.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54017831|dbj|BAD59201.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 420

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 133/439 (30%), Gaps = 50/439 (11%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++    L A +A   + +  E+  L        A +  R  +        +     R D 
Sbjct: 3   FALPEELTAYLAELDAFIEAEIIPL------EQADDNIRFFD--------HRREDARTDW 48

Query: 97  VE---FHPAWHALL----RRSIHDGLHCSIWDRSFEPVVRKQAHKI----RAAR--LYLM 143
                    W ALL    RR+   G +   + + F                 AR  L L 
Sbjct: 49  ERGGLPTAEWEALLAESRRRADAAGHYRYAFPQEFGGRDGTNLGMAVIREHLARRGLGLH 108

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             L+  H +  +     ++    +P     W   +              + +     G+T
Sbjct: 109 CDLQNEHAIVANNVGLLLMLEYGSPAQRAQWVDGL-------------AEGTKFFAFGIT 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           E   G+D   + +   +  D         W     ++DA ++ A+  G+ G    +   L
Sbjct: 156 EPEHGSDATHMETTAVRDGDHWIINGTKTWNTGVHIADADLIFARTSGQAGDGRGITAFL 215

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G   +       N       +  ++       + G        V+       + 
Sbjct: 216 VPTDAPGFTVEEYLWTF-NMPTDHARISLTDVRVPDAAIFGGEGRGLAVVQHFFNENRIR 274

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+   +  + +A+ YA+ R   G  L     ++  + ++        AL  + A S
Sbjct: 275 QAASSLGAAQYCIDQAVAYAKERKPFGKPLAANQAIQFPLVELHTQCEMLRALIHKTAWS 334

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D   + +           +  YW  ++  A   +AM+  GG GY   +     YR    
Sbjct: 335 MDTYGTFA-----VSEQVSMCNYWANRLCCAAADQAMQVHGGLGYSRHKPFEHIYRHHRR 389

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    +  V   L
Sbjct: 390 YRITEGAEEIQMRRVAGYL 408


>gi|67524609|ref|XP_660366.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4]
 gi|40744014|gb|EAA63196.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4]
 gi|259486321|tpe|CBF84066.1| TPA: glutaryl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_3G06040) [Aspergillus nidulans FGSC A4]
          Length = 424

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 131/365 (35%), Gaps = 34/365 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +      V   A  +    +  +       +   S  + + + 
Sbjct: 77  RKILEEMGELGLLGASIEGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLAMTAIH 136

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              T  +     P++              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 137 EFGTQELKDRLLPEL-------------AKGKLAGCFGLTEPNHGSDPGSMETIAREHPT 183

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G+Y LSG K W  +SP+SD  I+ A++   G++  F+V R      P G L    LKN
Sbjct: 184 KKGVYLLSGSKTWITNSPISDILIVWAKLQSTGKIRGFVVER---SKCPPGTLETPALKN 240

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K   R++ T  ++  +       +  D+   TGP   +     L  A  ++  +   +  
Sbjct: 241 KSALRASITGMIQLDDCPVPVENMFPDVEGLTGPFTCL-NSARLGIAFGAMGALEDCIDR 299

Query: 335 AIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  YA  R    G  L    ++++ +AD   D    T  + ++A   D  K   E     
Sbjct: 300 ARTYALERKQFKGNPLAKYQLIQKKLADAVTDATYGTLAATQVARLKDAGKCTPE----- 354

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K   C  A A      E  GG+   +E  IARH           G  +   L 
Sbjct: 355 --MISLVKRQNCDRALANSRTLQEVFGGNAASDEYHIARHVANLFVVQTYEGQSDIHALI 412

Query: 454 VLNLL 458
           +   +
Sbjct: 413 LGRAI 417


>gi|297566910|ref|YP_003685882.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus
           silvanus DSM 9946]
 gi|296851359|gb|ADH64374.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM
           9946]
          Length = 386

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 133/405 (32%), Gaps = 42/405 (10%)

Query: 63  EYVLSCTAQELARMANYNT-----PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           + +L+   +E+ R A         P +  +      W+  EF      L+ +    G   
Sbjct: 8   QELLTPEEREIQRAARRFLEAEALPYISGW------WEAGEFP---RHLIPKFAEMGFLG 58

Query: 118 SIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
                 +       A + + A  L  +           S      +    +    +++ P
Sbjct: 59  PTIPVEYGGGGASSATYGVMAYELERIDAGLRSFASVQSSLVMYPIYTYGSEEQKREFLP 118

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFL 235
           K+              K  +    GLTE  GG+D  A + ++  +  D         W  
Sbjct: 119 KL-------------AKGEMIGCFGLTEPDGGSDPDANMKTRAYRDGDHYVLSGTKMWIT 165

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +  ++   ++ A+ E      +V   +      G     +K+K+  R++ T EL      
Sbjct: 166 NGNLAHIAVVWAKDE----AGVVRGFIVPTDTQGFKANEVKHKMSLRASVTSELVLQEVR 221

Query: 296 GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                 L  + G    +  L       A  ++  +    +EA+ +A+ R   G  +  + 
Sbjct: 222 IPASLMLPKAEGLKAPLSCLTQARFGIAWGALGALEAVYSEALAFAQSRITFGKPIASRQ 281

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           +++  +  +A D      L++RLA   D  K R  + +  +           + A     
Sbjct: 282 LVQEKLVRMAADHTKGLLLAWRLAQLKDAGKLRPAQVSLGKRD-------NVRSALHAAR 334

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A E +GGSG   E    RH           G+ +   L +   L
Sbjct: 335 SAREILGGSGITLEYHSIRHMLNLETVDTYEGTHDIHTLILGREL 379


>gi|289706687|ref|ZP_06503035.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289556607|gb|EFD49950.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 408

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 118/373 (31%), Gaps = 28/373 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
              +D   F      ++      G+    ++    P      + + A  L          
Sbjct: 49  ARWYDDAVFP---REIVPELGRLGVLGMPYEGHGMPGRSAVEYGLAAQELEAGDSGLRTF 105

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +      +   +    +      W P++ + E                  GLTE   G+D
Sbjct: 106 VSVQGSLAMGAIHKHGSEEQKAQWLPRMTTGE-------------AVGCFGLTEPGAGSD 152

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A++T+  ++   G + L G K ++  + ++D  I+ AQ         V   +      G
Sbjct: 153 PASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWAQTGEPGDGRGVRGFVVPTDTPG 212

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSV 325
              + +  K+  R++   E+            L     V                   ++
Sbjct: 213 FRAEAITQKLSMRASVQCEIHLDGVRLPASAMLPADSAVGLKGPFQCLNEARYGIIWGAM 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R S    + YA +R   G  L    + +  +AD+A+ I     L+ ++  + D    
Sbjct: 273 GAARDSFDAVLDYAMQRQQFGVPLASHQLTQAKLADMAVAIGKGYLLAHQIGRAKDAGPL 332

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     M    K   C++A  +  EA E +GG+G   E S  RH     +     G
Sbjct: 333 TPA-------MISAGKLDNCRVAIGIAREAREMLGGNGITLEHSPLRHANNLESVRTYEG 385

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 386 TDEVHQLTLGRHL 398


>gi|328958396|ref|YP_004375782.1| short chain acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674720|gb|AEB30766.1| short chain acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 362

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 123/392 (31%), Gaps = 37/392 (9%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
             A+     L          DK    P    L    ++ G         +          
Sbjct: 4   DFADREVKPLDML------IDKQRDFP--KELWNNIVNTGFLGLTLPEEYGGAGFDVIAS 55

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            +    + +        +     +   V    T  + + + P+   R             
Sbjct: 56  SQTIYDFAVRNASVAFTLEGHYKTIDQVLKYATTELKEKYLPQATHR------------- 102

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
               G   TE +GG+++   T++  K  D            +  +++ + +L +      
Sbjct: 103 --IFGFSSTEPQGGSNVMGHTAKAVKEGDKWILNGNKTMITNGGLAEVYCVLLKTSPTE- 159

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVED 311
              +   L D    G  + + +  IG       E+   N       LLG +       ++
Sbjct: 160 ---LSCFLVDEDMPGFKHGKREEFIGMNGTPVGEIFLENVVVGEEHLLGTIGQGVEIGDN 216

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +    ++    + +L  A+ YA++R      +I    ++  I +IA+       
Sbjct: 217 AHYDARILMGAIAAGITQHALTIAVDYAKKREAIDTPIIQLHSIQTKITEIAIAKENTQL 276

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L    A    E KS ++       +A + K +  + +      A++ +GG GY  E  + 
Sbjct: 277 LYQEAAKLKLEGKSYAK-------VATMAKSYGSRASVIAADHALQVLGGYGYSREYPVE 329

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
              R++ A  I  GS   M++++   +     
Sbjct: 330 HLIRDARALQIAEGSLEKMMIEIAKEVVNEGG 361


>gi|297197121|ref|ZP_06914518.1| glutaryl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
 gi|297146594|gb|EDY58032.2| glutaryl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083]
          Length = 401

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 115/360 (31%), Gaps = 28/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             L+      GL    ++     +P        + A  +       +      +  +   
Sbjct: 58  KELITLFRDSGLAGLPYEGYGEHKPAASNLLSGMLALEMTRTDASVSTFFGVHNGLAMYS 117

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           +           W P              M          +TE  GG+D+A  + +  ++
Sbjct: 118 IHSGGDEEQRDRWLP-------------AMAAMDKIGAFAMTEPLGGSDVAGGMRTTARR 164

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D        KW  ++  +D  ++ A+             + +    G    +++NK+ 
Sbjct: 165 EGDTWILNGAKKWIGNATFADYVVVWARDVDDNHVKG---FVVEKGTPGFDPVKIQNKLA 221

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R     E+  ++        L       +  +IL       A  ++  M  +   A+ Y
Sbjct: 222 FRIVENAEITLTDVPVPEANRLQNINSFRDVAEILRATRAGVAWQALGVMTGAYELALDY 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +    +++  +     +I A+  +  +LA   D    R E ++ A     
Sbjct: 282 AREREQFGRPIGGFQLVQDLLVRSLGNITASWGMLVQLARLQDAGIFRDEHSSLA----- 336

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +       V+  + E  GG+G + +  I R + ++ A     G+     L V   +
Sbjct: 337 --KAFVTSRMREVVGWSREIFGGNGILLDHDIPRFFADAEAIYSFEGTREMNTLIVGKSI 394


>gi|302541931|ref|ZP_07294273.1| putative acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459549|gb|EFL22642.1| putative acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC
           53653]
          Length = 381

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 111/323 (34%), Gaps = 26/323 (8%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            M   EA   ++     A  + L    ++++ W P I             +         
Sbjct: 81  AMECTEAETALALQGLGAYPIVLSGGEKLYERWMPGI-------------RAGRTVTAFA 127

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           L+E   G+D AA++ +  +   G + L+G K ++S+ P +D   + A+     G   V  
Sbjct: 128 LSEPDAGSDAAALSLRADRDGAGGWRLTGEKCWISNAPGADVTTVFARTTPGAGSRGVTA 187

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIY 317
            L      GL  + L+       +    L F          L V             L+ 
Sbjct: 188 FLVPADRPGLGGEPLEM---LSPHPIGRLVFDGVPVTAEDVLGVPDAGFRVAMRTLNLLR 244

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 +V   + +L  ++ +A  R   GG L D   +   +A++A    AA  L +  A
Sbjct: 245 PSVGAFAVGMAQAALDASLAHAGSRTAFGGPLKDLQSVAHQLAEMATRTEAARLLVYAAA 304

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +++DE              + + K    + A  V+  A++  G         +   YRE 
Sbjct: 305 SAYDEGAPGI------TRHSAMAKLLATETAQYVVDAAVQIHGARALRRGHLLEHLYREV 358

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
            A  I  G+       +   L +
Sbjct: 359 RAPRIYEGATEVQRTIIAKELYR 381


>gi|284997063|ref|YP_003418830.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
 gi|284444958|gb|ADB86460.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.D.8.5]
          Length = 371

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 161/380 (42%), Gaps = 51/380 (13%)

Query: 93  RWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ E 
Sbjct: 25  KIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQGEL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +  M+ L    R  K++               PM K  +     LTE  GG
Sbjct: 83  ---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPSGG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLED 264
           +DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR    
Sbjct: 121 SDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG--- 176

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
              N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L  +
Sbjct: 177 ---NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLAIS 232

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N FD
Sbjct: 233 GIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNKFD 292

Query: 382 EA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E  K +    A  ++++ I       +A   +  +++  GG GY +  +I R YR++   
Sbjct: 293 ENSKDKGVYVAMLKLLSAI-------IANETVDISLQVFGGMGYAKGTTIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   +E+
Sbjct: 346 RIGEGTDEVQRHIIAKYIER 365


>gi|239979196|ref|ZP_04701720.1| putative glutaryl-CoA dehydrogenase [Streptomyces albus J1074]
 gi|291451074|ref|ZP_06590464.1| FadE7 [Streptomyces albus J1074]
 gi|291354023|gb|EFE80925.1| FadE7 [Streptomyces albus J1074]
          Length = 397

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 32/363 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           P    L R     GL     +          A+ +    L          +      +  
Sbjct: 55  PDLPGLARDFGAMGLLGMHLEGYGCAGTSALAYGVACRELEACDSGLRSFVSVQGSLAMY 114

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    ++W P++ + E                  GLTE   G+D A++ ++ ++
Sbjct: 115 ALHRFGSEEQKQEWLPRMAAGE-------------AIGCFGLTEPDHGSDPASMRTRARR 161

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  +  ++   ++ AQ +  +  F VP         G     +K K+ 
Sbjct: 162 DGGDWVLDGRKMWITNGAVAAVAVVWAQTDDGIRGFAVPT-----DTPGFSAPLIKRKMS 216

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEA 335
            R++ T EL           +L  + G       L  L+ A   +    +         A
Sbjct: 217 LRASVTSELVLDGVRLPASAELPGARGVSA---PLTCLNEARYGIVWGALGAARSAWQAA 273

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  +    + ++ + D+AL++   T  +  LA   D       E+     
Sbjct: 274 ADYAGQREQFGKPIAAFQLTQQKLVDMALELHKGTLTALHLARLKDS------ESGVHPA 327

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K    + A  +   A   +G +G   E  + RH     +     G+     L + 
Sbjct: 328 QISFGKLNNVREAIEICRTARTILGANGISLEYPVIRHMNNLESVLTYEGTTEMHTLSLG 387

Query: 456 NLL 458
             L
Sbjct: 388 QAL 390


>gi|25029335|ref|NP_739389.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259505663|ref|ZP_05748565.1| cyclohexanecarboxyl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|23494623|dbj|BAC19589.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259166745|gb|EEW51299.1| cyclohexanecarboxyl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
          Length = 380

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 127/397 (31%), Gaps = 30/397 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ +    Q     A     Q+          D++   P    L +     GL       
Sbjct: 2   DFSIDAEMQRYIDEARAFGEQIAP-DYQQREIDRI-IDP---ELRKEMGSRGLLAPELPT 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                  +               +   +L         +VA      V + W PKI S E
Sbjct: 57  ELGGRGERALTSGMVIEEVSRGDINVSYLQVVGSLVGQVVARNAQKSVAEKWVPKITSGE 116

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                          + +GL+E  GG+D        ++  DG + L+G K    +  + A
Sbjct: 117 -------------DIVAIGLSEPSGGSDAGNPDMTARRERDG-WVLNGTKSMSFALHAGA 162

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+ E       +   L +    G+      + +G  S     ++F N +      L
Sbjct: 163 TVVFARTEEGRRGRGISAFLVELDREGITRTAAND-MGTLSVGRGFVDFDNVWIPEENLL 221

Query: 303 NVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                   ++        A++    +   +V+L E   Y   R      +     +   +
Sbjct: 222 GAEGKAFTEVMQGFDFSRALIGLQVIGAAQVTLDETWEYTSTRQAFDQPISKFQGVSFPL 281

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+    + AA  +  +     D  +  + EAA  +  AP       K+A  VI + +   
Sbjct: 282 AEADTFLTAARVMCQKTLWLKDAGQPHTREAAMCKWWAP-------KVAYDVINQCLLSH 334

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  GY+++  I +  R+     I  G+   M L +  
Sbjct: 335 GQFGYLKDCPIEQRMRDVLGLQIGDGTAQIMKLIIAR 371


>gi|324998576|ref|ZP_08119688.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 392

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 115/370 (31%), Gaps = 37/370 (10%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H +       D+  F      +       G         +    +       A      +
Sbjct: 23  HDHAYWSRLEDEHRFP---WEVWEELAAGGWLGLTVPEEYGGGGQGMLELAVACETLAAS 79

Query: 145 QLEAGHLMSPSV--TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              AG  +        A+ +A   T        P + S E                 + L
Sbjct: 80  GGTAGTFLYILTPGFGATTLARHGTAEQKARLLPGLASGELH-------------FCMAL 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGRVGCFL 257
           TE   G+D  +I ++  +       + G K ++S    +D  + + +     + R     
Sbjct: 127 TEPDAGSDALSIRTRAVRDGSDF-VIDGQKIWISGLENADWMVAITRTTPAADARPRTSG 185

Query: 258 VPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
              LL D       G        K+G+    + ++           ++G+++     + D
Sbjct: 186 FTLLLVDVKEAVAAGTLRYTPIPKMGSNVVTSSQVFLDGVRVPESHVIGEVDAGFAVLWD 245

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           +     + +A   V     +L  A+ YAR R V G  +     ++  +A I         
Sbjct: 246 VLNPERILAAAGGVGSADAALDVAVRYARDREVFGRPIGANQAVQFPLAQIKAKTELGRL 305

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++++ A  +D+ +    E         I K    ++       A +  GG  Y +E  + 
Sbjct: 306 MTYKAAWLYDQGQPCHAE-------TSIAKLTGAQVGWEAAERAFQTFGGMAYSKEYPVE 358

Query: 432 RHYRESPANS 441
           R +R++    
Sbjct: 359 RLFRDARIAR 368


>gi|184200152|ref|YP_001854359.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
 gi|183580382|dbj|BAG28853.1| putative glutaryl-CoA dehydrogenase [Kocuria rhizophila DC2201]
          Length = 400

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 130/370 (35%), Gaps = 29/370 (7%)

Query: 94  WDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W++ E   P +  L       G+  +  +    P + +QA  + A  +  +         
Sbjct: 44  WERGEHPLPVFKGLADL----GIVGTFIEGYGCPGLSRQAAGLVAREMGRIDGSVNTFFG 99

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S      + ++      + W P              M K        LTE   G+D  
Sbjct: 100 VHSNLCMGSIYMLGNEEQRQRWLP-------------TMAKIEKTGAFALTEPTHGSDSV 146

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGL 270
           ++ +  ++  D        +W  +   +D  ++ A+   +G+V CF+V +  +   P G 
Sbjct: 147 SLETSARRDGDHWVLNGHKRWIGNGHAADVIVLYARDEADGQVKCFVVEKQEDGEYPQGY 206

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGM 328
               +  KIG R+    ++   +        L       +  K+L      ++  +V   
Sbjct: 207 RPTVIDGKIGKRAINQADIVIEDLRIPEENRLENCHSFKDVNKVLKATRGGASWEAVGHG 266

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +   A +YA  R   G  + +  +++  +A +  D+ +   L  R+A          E
Sbjct: 267 MAAFEIAANYALEREQFGMPIANYQLVQERLATMLSDLTSMQLLCTRMAQL-------QE 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                  MA + K    + A  +   A + +GG+G + E  I RH  +    S   G+ +
Sbjct: 320 SDQLTDAMASLVKMTTSRKALDMCRTARDMLGGNGLLLENHIGRHLTDMEVVSTYEGTDS 379

Query: 449 AMVLDVLNLL 458
              L V   +
Sbjct: 380 VQALIVGRAI 389


>gi|163793830|ref|ZP_02187804.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159180941|gb|EDP65458.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 566

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 133/401 (33%), Gaps = 46/401 (11%)

Query: 86  AYGPGGERWDKVEFHPA-WH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            +   G   DKVE H   WH         ++      G            +   +   + 
Sbjct: 188 QFTRFGA--DKVEPHAHRWHLDDKLIPIEVVEAMAELGTFGLTVPEEHGGLGMGKEALVV 245

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            +     A +  G L + S  +A ++ L  T      W P+I S E  PT          
Sbjct: 246 VSETLSRAYIGVGSLGTRSEIAAELIRLGGTDAQKAHWLPRIASGETLPTAV-------- 297

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGC 255
                 TE   G+D+A + ++  +  D         W   +  +D   +L + +    G 
Sbjct: 298 -----FTEPSTGSDLARLRTRAARDGDTYRVHGNKTWITHAARTDLMTLLVRTDPNEAGY 352

Query: 256 FLVPRLLEDGSPN---------GLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDL 302
             +  LL +             G+    +   +G R     E+ F          L G  
Sbjct: 353 RGLSMLLAEKPRGTDTDPFPATGMSGGEIP-VLGYRGMKEYEIAFDGFSVPAASLLGGVE 411

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +        + +A  ++   R +L   + YA  R   G  +   P +   +A +
Sbjct: 412 GQGFKQLMATFESARIQTAARALGVGRNALELGLRYASERVQFGQEIRHFPRVANKLARM 471

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A ++ AA AL+   A   D  +    EA  A+++A            A   +A++  GG+
Sbjct: 472 AAELTAARALTLYAAREKDSDRRCDIEAGMAKLLAARVA-------WAAADDALQIHGGN 524

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           G+  E  I+R   ++   +I  G+G      +   L     
Sbjct: 525 GFALEYPISRVLCDARILNIFEGAGEIQAGVIARGLLTAGR 565


>gi|83638340|gb|ABC33874.1| probable acyl-CoA dehydrogenase [Rhodococcus sp. T104]
          Length = 378

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 121/358 (33%), Gaps = 27/358 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           ALL +    G         +                      E   L   +   A ++A 
Sbjct: 42  ALLEKFAGLGWLAVSLPEEYGGGGAGMVE-------------ECIFLEETARGLAPIIAY 88

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
            T     + +    +  E           +     + L+E   G+D+  +  + + + D 
Sbjct: 89  STGLTAAQTYLR--YGTEEQKRTIVGNMASGKLEAIALSEPGAGSDLGGVRIKAELVDDH 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W  ++ +++  ++LA+ +        +   +      GL    ++      +
Sbjct: 147 YVVNGQKTWISAAHVAEHILLLARTDASGNKHQGLTLFMVPADSPGLEIHGIET---MEA 203

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               +L F++       ++G  N +   +     +  L  A M++ G + SL + I +  
Sbjct: 204 RTCNDLYFTDVAVPASAVVGTPNQAWRHLMRGLSVERLIIATMALGGAQRSLDDVIAFVT 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     ++  IAD+A +IA A +  + +A   D  +  +           + 
Sbjct: 264 EREQFGQKISSFQAIRHRIADLATEIAFAKSFVYDVAERIDAGEEDN-----LNREGSMA 318

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K  C ++A     EAM+ +GG GY  E  +    R S A  I  G+       +   L
Sbjct: 319 KLKCTEIAKKTALEAMQMMGGYGYTREYGMEEQVRRSLAPPIYGGTNEIQREIISKSL 376


>gi|294886647|ref|XP_002771802.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
 gi|239875564|gb|EER03618.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983]
          Length = 436

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/440 (19%), Positives = 150/440 (34%), Gaps = 59/440 (13%)

Query: 62  GEYVLSCTAQELARMA------NYNTPQLHAY------GPGGERWDKVEFHPAWHALLRR 109
           G       A+E +  A      +++ P+ H Y             D+  +  + H   RR
Sbjct: 7   GGDASDADAREASITAQPGWYWDWDFPKHHPYLNEVALDRLNRVIDECIWCQSHHEF-RR 65

Query: 110 SIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
            I   +  H   +   +E   +      R A  Y          +S          L+  
Sbjct: 66  LIRAFILEHIIPFIPQWEAEGKFPRELHRKA--YQSGVSSRVDCLSGPHEVDIWHDLIIN 123

Query: 168 PRVH---------------KDWAPKIFSR------EYDPTNKAPMQKTSVAIGLGLTEKR 206
             +                    P + +       E        + +    + L +TE  
Sbjct: 124 DELANCGAGGVIASCFVSLAIGLPPLLAGGLAGGPELTSRLARDIVQADKILALAVTEPY 183

Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D+A I +      DG  Y ++G K F++S     +   A   G  G      L+ D 
Sbjct: 184 AGSDVANIRTTAVLQPDGKHYLVNGMKTFITSGPWADYFTTAVGSGDSGL---SLLMIDR 240

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
           +  G+   RL  + G +S+ T  + F +       L+G        +        L  A+
Sbjct: 241 TLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGFKAIMHNFNHERLMLAL 299

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S    R+ + +AI YA+ R   G  LID  V++  IA++A  + A       +A  + +
Sbjct: 300 QSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRVLATHYYIENIAIQWPQ 359

Query: 383 AKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS----IARHYRE 436
           +         A  ++ A  T  +C         EA + +GG  Y++       I R YRE
Sbjct: 360 SSQSELAGKVALLKVQATKTFEFC-------AREASQVLGGRSYLQGSGPGARIERLYRE 412

Query: 437 SPANSILLGSGNAMVLDVLN 456
              N+I  GS   M+     
Sbjct: 413 VRVNAIGGGSEEIMLDLAAR 432


>gi|91789679|ref|YP_550631.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91698904|gb|ABE45733.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 406

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/406 (16%), Positives = 131/406 (32%), Gaps = 47/406 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
              +E A+      P  H      E   K  F       + R+   GL+   +       
Sbjct: 26  AEVREFAQDVLR--PVAHRLNTTPE--SKEAFPREQFDAMARA---GLYTIPFPADVGGR 78

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA---LMTTPRVHKDWAPKIFSREYD 184
             +         L  +A    G   +     A +V          +   + P +   E+ 
Sbjct: 79  GLEFPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKAPAALRNKYLPALIRGEF- 137

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAA--ITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                             +E    TD++A  + +   +++ G       +W  +SP++D 
Sbjct: 138 ------------VGSFATSEPEASTDLSATSMQTTATQVAGGWRINGRKRWITNSPVADW 185

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            ++L +   R     +  L+ D    G+   +   K+GN    T ++ F   F     ++
Sbjct: 186 IVVLCRSGER-----LTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVV 240

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G              L  +    + V+  + +   A  Y  +R V G  L      +   
Sbjct: 241 GTEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLF 300

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A+ A+ +  A +L  +    +D   S   EAA A       K    ++A  V  +A++  
Sbjct: 301 AEHAVGLEQARSLYQKAGYRYDVEGSAEVEAAMA-------KLVGSRLAVDVARDAIQVC 353

Query: 420 GGSGYIEE-------RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G  G++ E         +   YR++    I  G+       +   +
Sbjct: 354 GAYGFVRELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNI 399


>gi|296536033|ref|ZP_06898172.1| butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296263639|gb|EFH10125.1| butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 392

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 129/388 (33%), Gaps = 33/388 (8%)

Query: 79  YNTPQLHAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
            +            R  +  ++ H A  + LR +   G    +     E           
Sbjct: 15  RHADWAREVEAWAARHAEALIDHHDADASTLRLTRAMGEAGLLRAAVPEDGRLDVRSLCI 74

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A  +       A    + +      + L     +   + P              +++ + 
Sbjct: 75  ARDILARHAGLADFAFAMAGLGTGSITLFGDAALKARYLP-------------AVRRGAS 121

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255
                L+E   G+D+AA+ +   +  +G + +SG K ++S+  ++  +++ A+     G 
Sbjct: 122 LAAFALSEPEAGSDVAALATTATRDGNGHWRISGTKTWISNGGIAGHYVVFARSGEAPGA 181

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   +      GL  +           AT  L F +       D +    P +  K+ 
Sbjct: 182 RGLSAFVVPADAPGLSVEARIEVTAPHPLAT--LRFDDVRVP---DSHRLGAPGDGFKVA 236

Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
           +             ++   R +L   +  A  RH+ GG L +Q   + AIAD A ++ AA
Sbjct: 237 MATLDVFRATVGAAALGFARRALDLTVERAENRHLFGGPLFEQQQSQVAIADSATEVEAA 296

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
             L +R A   D  + R          A + K +  + A      A++  GG G      
Sbjct: 297 ALLVYRAAWLKDSGRPRI------SREASMAKLYATEAAQRAADRAVQIHGGLGVTRGHK 350

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNL 457
               YRE  A  +  G+     + +   
Sbjct: 351 AEELYREVRALRVYEGASEVQRIVIARA 378


>gi|154292281|ref|XP_001546716.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150846171|gb|EDN21364.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 428

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 112/309 (36%), Gaps = 38/309 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    + + PK+              K  +    GLTE   G+D  ++ +  +  
Sbjct: 139 IDEFGTQEQKEKYLPKL-------------AKGKLLGCFGLTEPNHGSDPGSMETTAKPH 185

Query: 222 S--DGIYCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
               G Y +SG   W  +SP++D F++ A++   G++  F++ R   D  P  L    LK
Sbjct: 186 PTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIRGFIIDR--ADCPPGTLETPALK 243

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS---- 331
           +K G R++ T  ++                  VE ++     L+SA   ++         
Sbjct: 244 DKNGLRASLTGMIQLDECPVPEANM----FQTVEGLRGPFTCLNSARYGIAWGMTGALEN 299

Query: 332 -LAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  A  YA  R    G  L    ++++ +AD   D A  T    ++    D+ ++    
Sbjct: 300 CIDRARTYALERKQFKGNPLAKYQLVQKKLADAVSDAAFGTLACVQVGRLKDKGEA---- 355

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  M  + K   C  A        E  GG+   +E  I RH           G  + 
Sbjct: 356 ---APEMISMIKRQNCDAALRNARTLQEIFGGNAASDEYGIGRHVSNLFVTQTYEGQSDI 412

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 413 HCLILGRAI 421


>gi|50556786|ref|XP_505801.1| YALI0F23749p [Yarrowia lipolytica]
 gi|49651671|emb|CAG78612.1| YALI0F23749p [Yarrowia lipolytica]
          Length = 417

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 129/372 (34%), Gaps = 37/372 (9%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           + E  P   +++++    GL  +       P +   A+ + A  +  +       +   S
Sbjct: 67  RTEEFP--RSIMKQMGEVGLLGTTVKSHGCPGMSSVAYGLVAREVERVDSGYRSAMSVQS 124

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
                 +    +      + PK+ S E                  GLTE   G+D  ++ 
Sbjct: 125 SLVMHPIEQFGSQEQKDRFLPKLASGEM-------------IGCFGLTEPNHGSDPGSME 171

Query: 216 SQG--QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           +         G+  L+G K W  +SP++D  ++ A+++G++  FLV R       +GL  
Sbjct: 172 TVAKMHPTKKGVIVLNGAKNWITNSPIADLMVVWAKLDGKIRGFLVERSQV---ASGLAT 228

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS- 331
             +KNK   R++ T  ++  +    +       TG          L+SA   ++   +  
Sbjct: 229 PAIKNKTALRASITGMIQMDDVEIPVENMFPEVTGLK---GPFTCLNSARYGIAWGTMGA 285

Query: 332 ----LAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               +  A  Y+  R    G  L    ++++ +AD   D       + ++    D     
Sbjct: 286 LSESIKLAREYSLDRKQFKGQPLAKYQLIQKKLADALTDATYGQVAAIQVGRLKDAGNCP 345

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            E       +  + K   C  A A     ME  GG+   +E  I R            G 
Sbjct: 346 PE-------LISMIKRQNCDRALAGARNLMEIFGGNAASDEYHIGRIAANLWVVQTYEGQ 398

Query: 447 GNAMVLDVLNLL 458
            +   L +   +
Sbjct: 399 SDIHALILGRAM 410


>gi|268592063|ref|ZP_06126284.1| crotonobetainyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
 gi|291312456|gb|EFE52909.1| crotonobetainyl-CoA dehydrogenase [Providencia rettgeri DSM 1131]
          Length = 380

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 128/351 (36%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMEIDNLLIPEEHGGLDAGFITVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
               +  ++E      A            +TE   G+D+ ++ +  Q+ +  +Y      
Sbjct: 96  TVL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTYQRRNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++++        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMSRDADSPDKPVFTEWFLDMSKPGIKVNKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 NVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMRNMLYETAWKSDNGLITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G   E  IAR +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGEHRIARFWRDLRVDRVSGGSDEMQILTLGRSVLK 377


>gi|315056361|ref|XP_003177555.1| acyl-CoA dehydrogenase family member 9 [Arthroderma gypseum CBS
           118893]
 gi|311339401|gb|EFQ98603.1| acyl-CoA dehydrogenase family member 9 [Arthroderma gypseum CBS
           118893]
          Length = 432

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/458 (17%), Positives = 156/458 (34%), Gaps = 48/458 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT----AQELARMANYN 80
              P  +     YS D       + + +  HK+L       +       AQE        
Sbjct: 5   FGSPVPYAEPQWYSRD------CSPYHNDSHKKLRAFVREYVEMELMPYAQEWEEQGFVP 58

Query: 81  TPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              +  +   G    D+ +  P +  +    +  G+    WD     +V  + +++    
Sbjct: 59  DETIKRFAKNGFCVIDRSK--PEY--MGGIGLPAGIAPEEWDVFHTLIVTDELNRVGYTG 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                      L + +      +    T +   ++ PK+   E                 
Sbjct: 115 -------PIWGLNAGNSIGCPPIMNFGTEKQKLEYMPKVARGEIR-------------FC 154

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           LG+TE   G+D++ I +  +K+ D        KW +++ +   +   A   G  G   + 
Sbjct: 155 LGVTEPDAGSDVSGIKTVAKKVGDRYIVNGAKKW-ITNGIWADYCTAAVRTGGPGHGGIS 213

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+   +  G+  +R+ N  G  ++ +  LEF++       L+G  N     +       
Sbjct: 214 FLIIPLTAEGVTRRRMFNS-GVHASGSTFLEFADVEVPLENLIGKENEGFKYIMSNFNPE 272

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A   +   RV + +A  Y+  R   G  L+   V++  I+ +   I    A   +L
Sbjct: 273 RLTLASACIRLSRVCVEDAFKYSTTRETFGKPLLANQVIRAKISKMGQLIEPCQAFMDQL 332

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARH 433
           A +   ++    +      M  + K    +    V  EA + +GG+GY    +   I   
Sbjct: 333 AYTIKTSEKTGRKVDI-GGMTALLKVMSTRCLEKVCREAQQIMGGAGYNKAGKGSRIEAI 391

Query: 434 YRESPANSILLGSGNAM----VLDVLNLLEKGTNLFEQ 467
            R+     +  GS   +    V + L  + K     ++
Sbjct: 392 SRDVRVYVVGGGSEEILQDLSVREELKHMRKAMEAQKR 429


>gi|332283920|ref|YP_004415831.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330427873|gb|AEC19207.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 388

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 38/352 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
             L +    DG         +          I  A + +       A L     +  ++ 
Sbjct: 39  FELHQALARDGWLGICIPEEYGGSGL----GITEAAIMMQTISQSGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
             + V    T    +   P             P+ +        +TE   G +   +  +
Sbjct: 95  GLNPVVQFGTEEQKQRMLP-------------PLIQGKEKACFAVTEPNTGLNTTQLKVK 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQ 273
            ++  D         W  S+ +++  ++LA+       +     +         N +  +
Sbjct: 142 AERQGDHYVLSGAKVWISSAQVAEKMLILARTTPLEEVKNHSDGLSLFYTTLDRNAVDVR 201

Query: 274 RLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            ++ K+G +   + EL        +   +G+       +        +  A  +V   R 
Sbjct: 202 EIE-KMGRKCVDSNELFIDGLKVPVEDRIGEEGKGFKYILHGMNAERILIASEAVGLGRA 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A +YA+ R V G  +     ++  +A   +++ AA  + F  A+ +D+      +A
Sbjct: 261 ALRKATNYAKERVVFGRPIGQNQGIQHPLAACWMELEAANLMVFHAASLYDQGDQAGTQA 320

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             A+ +A    +  C+ A       +   GG GY +E  + R+ RE     I
Sbjct: 321 NAAKYLAGEAGFNACQTA-------VMTHGGFGYAKEYHVERYLREIMIPRI 365


>gi|303322106|ref|XP_003071046.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110745|gb|EER28901.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032744|gb|EFW14695.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 447

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 126/369 (34%), Gaps = 37/369 (10%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------ 143
             ER +  E+    H L      DG                    I  A + L       
Sbjct: 77  WAERDETGEYP---HELHAALAKDGWIGIALPEELGGAGL----GISEATMMLHTIAQSG 129

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A L     +  +V +   VA   T    +   PK+ + EY                 G+T
Sbjct: 130 AGLAGAQSIHANVYATQPVAKFATEEQRQQMLPKLIAGEYR-------------TCFGVT 176

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLV 258
           E   G +   + +   +  D         W  S+ ++   ++LA+        R    L 
Sbjct: 177 EPNTGLETLKLRTTATRDGDHYRVSGQKIWISSAQVAKKMVLLARTTPIEEVKRPSEGLS 236

Query: 259 PRLLE-DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
              ++ D +  GL  +++K K+G RS    E+ F N   +   L+G        V     
Sbjct: 237 LFFIDFDKNAPGLDLRKIK-KMGGRSVDANEVFFDNYRVSADTLIGKEGEGFKIVLHGMN 295

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++    V+L +A  YA+ R V G  +     +   +A   +++ AA   ++
Sbjct: 296 AERCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQGIAHPLASAYMNLEAAKLATY 355

Query: 375 RLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +D +K  +S       +     K+   + A      A+   GG GY +E  + R+
Sbjct: 356 HAARLYDASKTDKSISQHTVGVACNSAKFLAAEAAFTACERAVLAHGGMGYAQEFHVERY 415

Query: 434 YRESPANSI 442
            RE     I
Sbjct: 416 LRECFVPRI 424


>gi|156042750|ref|XP_001587932.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980]
 gi|154695559|gb|EDN95297.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 428

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 112/309 (36%), Gaps = 38/309 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T    + + PK+              K  +    GLTE   G+D  ++ +  +  
Sbjct: 139 IDEFGTQEQKEKYLPKL-------------AKGKLLGCFGLTEPNHGSDPGSMETTAKPH 185

Query: 222 S--DGIYCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
               G Y +SG   W  +SP++D F++ A++   G++  F++ R   D  P  L    LK
Sbjct: 186 PTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIKGFIIDR--ADCPPGTLETPALK 243

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS---- 331
           NK G R++ T  ++                  VE ++     L+SA   ++         
Sbjct: 244 NKNGLRASLTGMIQLDECPVPEANM----FQTVEGLRGPFTCLNSARYGIAWGMTGALED 299

Query: 332 -LAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +  A  YA  R    G  L    ++++ +AD   D A  T    ++    D+ ++    
Sbjct: 300 CIDRARTYALERKQFKGNPLAKYQLVQKKLADAVSDAAFGTLACVQVGRLKDKGEA---- 355

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A  M  + K   C  A        E  GG+   +E  I RH           G  + 
Sbjct: 356 ---APEMISMIKRQNCDAALRNARTLQEIFGGNAASDEYGIGRHVSNLFVTQTYEGQSDI 412

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 413 HCLILGRAI 421


>gi|315445458|ref|YP_004078337.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263761|gb|ADU00503.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 402

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 123/372 (33%), Gaps = 36/372 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASM 161
             L +R    GL                A     A + L A        +      S   
Sbjct: 59  KELGKRFGELGLLGM--HLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFS 116

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +     +W P++ S                    GLTE   G++ A + ++ ++ 
Sbjct: 117 IHRYGSEEQKNEWLPRLASG-------------DAIGCFGLTEPDFGSNPAGMRTRAKRD 163

Query: 222 SDGI---YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             G    + L+G K ++++  ++D   + AQ +  +  FLVP         G     +  
Sbjct: 164 GSGENADWILNGTKMWITNGNLADVATVWAQTDEGIRGFLVPT-----DTPGFTANAIHR 218

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           K+  R++ T EL   N        L  + G    +  L          ++   R SL   
Sbjct: 219 KLSLRASITSELVLDNVRLPASAQLPEAVGLSAPLSCLNEARFGIVFGALGAARDSLETT 278

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y + R V    L    + +  +A++ +++     L+  L    D    R E+      
Sbjct: 279 IAYTQTREVFDRPLAGYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQ------ 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K    + A A+  E    +GGSG   E S  RH     +     G+    +L + 
Sbjct: 333 -VSLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIG 391

Query: 456 NLLEKGTNLFEQ 467
             L  G   F  
Sbjct: 392 KALT-GHAAFRA 402


>gi|227829855|ref|YP_002831634.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|227456302|gb|ACP34989.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
          Length = 371

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 161/380 (42%), Gaps = 51/380 (13%)

Query: 93  RWDKVEFHPAWHALLRRSIHDG----LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           + DK +++P    L+R+    G    L   +       ++ + A    +  L   AQ E 
Sbjct: 25  KIDKEDYYP--RDLVRKLGELGFLIPLTNGLSHYDMMIILEEIAKVSGSLALIADAQGEL 82

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +  M+ L    R  K++               PM K  +     LTE  GG
Sbjct: 83  ---------AGEMIRLYADERQRKEFLE-------------PMSKGEMIGSFALTEPSGG 120

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLED 264
           +DI ++ +  +K  +G++ + GHK +++    +D F+ + +       +  F+VPR    
Sbjct: 121 SDIGSMKTFAEKR-NGLWRIKGHKMWITQGLYADIFVTVTRTGSSRHDLSVFIVPRG--- 176

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
              N +  ++++  +GNR   T E+ F +      +++G++N     V  +  +  L  +
Sbjct: 177 ---NCVETRKIE-VMGNRGTGTAEVIFHDCEVSKDYVVGEVNNGWNMVNSVLEIGRLAIS 232

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            +++     +L EA+ +AR R   G  + D   ++   AD    + A  +++  ++N FD
Sbjct: 233 GIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIRWYFADSVAKLNAVKSMAKDVSNKFD 292

Query: 382 EA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           E  K +    A  ++++ I       +A   +  +++  GG GY +  +I R YR++   
Sbjct: 293 ENSKDKGVYVAMLKLLSAI-------IANETVDISLQVFGGMGYAKGTTIERIYRDARLL 345

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+       +   +E+
Sbjct: 346 RIGEGTDEVQRHIIAKYIER 365


>gi|197106606|ref|YP_002131983.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196480026|gb|ACG79554.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 548

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/457 (16%), Positives = 148/457 (32%), Gaps = 44/457 (9%)

Query: 29  PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88
           P  + ++A   + ++ AL       V   +  L +      + E + +          + 
Sbjct: 114 PATLEVSAARLEPVIAALRPGAAPAVRLRIVELLDQARGRPSLEASGLDETLEAIRDQFT 173

Query: 89  PGGERWDKVEFHPAWH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
                     F   WH         L+      G+       ++      +      +  
Sbjct: 174 AFAAEK-ITPFAHGWHLRDELIPLPLIEELGALGVFGLTAPEAYGGSGLGKVAMCVVSEA 232

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                +  G L + S  +A ++    T    + + P I S    PT              
Sbjct: 233 LSRGWIGTGSLGTRSEIAAELIVAHGTDEQKQRFLPGIASGAVIPTAV------------ 280

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVP 259
             TE   G+D+ ++ ++ ++  D         W   +  +D   +L + +        + 
Sbjct: 281 -FTEPEAGSDLGSLRTRAERDGDVWKVWGAKTWITHAARADLMTLLVRTDPASRDHRGLS 339

Query: 260 RLLEDGSPNGLCY---------QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGP 308
             L  G P G                  IG R     EL F          L      G 
Sbjct: 340 MFL-AGKPRGTSADPFPAPGMGGGEIPVIGYRGMKEYELAFEGFEVPHANLLGGREGQGF 398

Query: 309 VEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           ++ M       + +A  ++   + +L  A+ YA +R   G  L   P +   +A +A +I
Sbjct: 399 IQLMATFESARIQTAARAIGVAQNALDLALDYALQRRQFGQPLAAFPRVADKLAMMAAEI 458

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A  L++  A + D  +    EA  A++ A            A    A++  GG+G+  
Sbjct: 459 LGARRLAWFAAEAKDAGRRCDLEAGMAKLTAARIA-------WAAADNAVQIHGGTGFAV 511

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           E+ ++R   ++   +I  G+G      +   L +G N
Sbjct: 512 EQPVSRVLADARILNIFEGAGEIQAQVIARRLLEGAN 548


>gi|242814012|ref|XP_002486284.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218714623|gb|EED14046.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 426

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/309 (22%), Positives = 116/309 (37%), Gaps = 38/309 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           +    T      + P++              K  +    GLTE   G+D  ++ +  +  
Sbjct: 137 IHEFGTQEQKDRFLPQL-------------AKGKLLGCFGLTEPNHGSDPGSMETVAREH 183

Query: 220 KISDGIYCLSG-HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRL 275
               G Y LSG   W  +SP+SD  ++ A++E  G++  FL+ R      P G L    +
Sbjct: 184 PTKKGYYSLSGAKTWITNSPISDVLLVWAKLESTGKIKGFLIER---SKCPPGTLETPAI 240

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRV 330
           KNK   R++ T  ++  N        L    G          L+SA + ++      +  
Sbjct: 241 KNKTALRASITGMIQMDNCPVPEENMLPTVEGLS---GPFTCLNSARLGIAFGVTGALED 297

Query: 331 SLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           +L+ A  Y+  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E 
Sbjct: 298 ALSRAREYSLDRKQFKGNPLAKYQLIQKKLADAATDAAFGTLAAIQVARLKDAGKSTPE- 356

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 M  + K   C  A A      E  GG+   +E  I RH           G  + 
Sbjct: 357 ------MISMIKRQNCDRALANARTLQEIFGGNATSDEYHIGRHVANLFVTQTYEGQSDI 410

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 411 HALILGRAI 419


>gi|302533625|ref|ZP_07285967.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302442520|gb|EFL14336.1| acyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 394

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 134/414 (32%), Gaps = 43/414 (10%)

Query: 59  ELLG--EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
           ELLG  +  +  T +  A  A+   P +  +   GE        P    L R     G  
Sbjct: 18  ELLGPEDLAVRDTVRSWA--ADRVLPHIAQWYEDGEL-------PQIRELARELGSIG-- 66

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHKDW 174
                 +        A +   A L L A        +      +   +    +    + W
Sbjct: 67  ALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIWKYGSEEQKQRW 126

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P + + E             +     LTE   G+D AA+ +  ++            W 
Sbjct: 127 LPGMAAGE-------------LIGCFALTEPDIGSDPAAMRTYAKRDGSDWVLNGRKMWI 173

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            +  ++   ++ AQ +  +  F VP         G     +K+K   R++ T EL   + 
Sbjct: 174 TNGSVAAVAVVWAQTDEGIRGFAVPT-----DSAGFSAPEIKHKWSLRASVTSELVLDDV 228

Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                  L   TG    +  L +    I+  S+   R S   A+ YA+ R   G  +   
Sbjct: 229 RLPADAVLPEVTGLKGPLGCLSHARYGIIWGSMGAARASFEAALDYAKTREQFGRPIGGF 288

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + +  ++D+AL++     L+  L    D    R E+           K    + A  + 
Sbjct: 289 QLTQAKLSDMALELHKGILLAHHLGRRMDAGTLRPEQ-------ISFGKLNNVREAIDIC 341

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             A   +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 342 RTARTILGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 394


>gi|192293392|ref|YP_001993997.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192287141|gb|ACF03522.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 388

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQ 145
                + D+    P  H   +     G        ++        +A  +  A     A 
Sbjct: 25  DAYWLKKDREGGFP--HDFHKALADAGWLGICVPEAYGGSGLGITEAAIMMRAISESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V   + V +  T    +   P             PM +        +TE 
Sbjct: 83  MSGASAVHINVFGLNPVVVFGTEEQRQRMLP-------------PMVEGRDKACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ +++  ++LA+       +     +   
Sbjct: 130 NTGLNTTQLKTRAVRKGDRYVVNGQKVWISTAQVANKILLLARTTPLEEVKSPTHGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
             D     +    ++ K+G +   + EL F +    +   +G+       + +      +
Sbjct: 190 YADFDRTRIKVHEIE-KMGRKIVDSNELFFEDFEIPVEDRIGEEGKGFHYILEGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V   +++L+ A  YA+ R V    +     ++  +A   +++ AA  +    A 
Sbjct: 249 LIAAEAVGLGKLALSRAADYAKTRIVFNRPIGQNQGIQHPLAKNWVELEAAWLMVMSAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+       A  A+ +A    +  C+       +A+   GG GY +E  + R+ RE  
Sbjct: 309 QYDQGMPCGAAANAAKYLAGEAGFQACE-------QAVMTHGGFGYAKEYHVERYLREVM 361

Query: 439 ANSI 442
              I
Sbjct: 362 IPRI 365


>gi|260550909|ref|ZP_05825115.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260406036|gb|EEW99522.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 325

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 112/320 (35%), Gaps = 22/320 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
               P  ++W++    P   ++  +   +G  C      +        + +        A
Sbjct: 21  EHIAPHYDQWEREGIMP--RSVWNQLGENGFLCVDVPEEYGGYGVPTYYSLMLVEESARA 78

Query: 145 QLEA--GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              A    +   S  +A  +  + T    + W PK+ + E             V   +G+
Sbjct: 79  GFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGM 125

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRL 261
           TE   G+D+ ++ +      D  Y L+G K F+S+      ++LA + + +     V  L
Sbjct: 126 TEPGAGSDLQSMRTSAILQDDH-YLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLL 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L D    G       +KIG  S  T EL F N       LLG        +         
Sbjct: 185 LADTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELPRERT 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++  +R ++  A  Y + RH  G  +      +  +A   +D  A TA   R   
Sbjct: 245 AIASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVA 304

Query: 379 SFDEAKSRSEEAAYARIMAP 398
            + E K   E AA  +  + 
Sbjct: 305 LYQEGKLDVETAAALKSFST 324


>gi|289641780|ref|ZP_06473938.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289508424|gb|EFD29365.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 388

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 124/378 (32%), Gaps = 38/378 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--Q 131
           A +AN                D     P            G         +        +
Sbjct: 17  AELANKFD------DQYWLEKDSAHEFPT--EFYDAFARGGWLGITTPEEYGGHGLGITE 68

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A  +          + A   M  S+     V +  +  + +   P+I + +         
Sbjct: 69  ASILLEEVSASGGGMNAASSMHLSIFGMHPVIVHGSEELKRRNLPRIVNGDLH------- 121

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                 +  G+TE   G D   IT+  ++  D         W   +  S+  ++L +   
Sbjct: 122 ------VCFGVTEPGAGLDTTRITTFARRDGDHYVVNGRKVWISKALESEKVLLLTRTTK 175

Query: 252 ----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNV 304
               +     +   L +   N +  + +  K+G  + ++ EL   +    +   +G+   
Sbjct: 176 YEDVKKKTDGMTLFLTNLDRNAVDIRPI-RKMGRNAVSSNELFIDDLRIPVEDRVGEEGA 234

Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364
               + D      +  A  ++   R +L +A+ Y   R V G  +     ++  +AD   
Sbjct: 235 GFRYLLDGLNPERMLIAAEALGLGRAALRQAVRYGNEREVFGRPIGKNQGLQFPLADSLA 294

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
            + AA  +  +    +D+ K  + EA  A+ +       C          A++  GG GY
Sbjct: 295 HLDAAELVLRKATWLYDQGKPCAREANTAKYL-------CADAGFQAADRALQTHGGMGY 347

Query: 425 IEERSIARHYRESPANSI 442
            EE  +AR++RE+    I
Sbjct: 348 SEEYPVARYFREARLLRI 365


>gi|40556687|gb|AAR87758.1| ZmaI [Bacillus cereus]
          Length = 397

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 131/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P   RW+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PHANRWEIEQGIPS--DIIKTCAKNGYLGGTLPAEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPI----ACLVPKDSV 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N     +   N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNV---EIPFENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|226364612|ref|YP_002782394.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226243101|dbj|BAH53449.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 412

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 110/316 (34%), Gaps = 35/316 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           +A  +    T    + W P + +                     +TE   G+D    + S
Sbjct: 114 AAGTIRSRGTLAQKERWLPGLVT-------------FEKVGAWAITEPDSGSDAFGGMKS 160

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGL 270
             ++  D  Y L+G K F+++   +D  ++ A+++            V   + D    GL
Sbjct: 161 YVRRDGDD-YILNGQKTFITNGPYADVLVVYAKLDEGDSSVDRRDRKVLAFVLDAGMEGL 219

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--------STGPVEDMKILIYLDSAI 322
                  K+G  S+ T EL F N        L               ++      +  A 
Sbjct: 220 TQGAPFKKMGMNSSPTGELFFDNVRVTRDRLLGETEDGGKSDGKASAKENFAAERIGIAS 279

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S+  +       + YAR R + G  +    +++  +A++ +       + F        
Sbjct: 280 LSLGIINECHRLCVDYARSRKLWGKEIAQFQLVQLKLAEMEIARINVQNMVFNAIERTAA 339

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 340 GDRVSLAEASAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 393

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 394 YAGSNEIQVTHIAKGL 409


>gi|196233129|ref|ZP_03131976.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
 gi|196222773|gb|EDY17296.1| acyl-CoA dehydrogenase domain protein [Chthoniobacter flavus
           Ellin428]
          Length = 623

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 132/354 (37%), Gaps = 42/354 (11%)

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFS 180
            +  +   Q +  RAA +          L+S   S+     + L       K W P++ +
Sbjct: 117 EYGGLGLSQTNYCRAAMVLGSYCGNLTALLSAHQSIGVPQPLILFGNEEQKKRWLPRVAA 176

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM 239
            E                   LTE + G+D A + ++ +   DG  + ++G K + ++ +
Sbjct: 177 GE--------------VSAFALTEPKVGSDPAKMETRAEPTEDGSHFIINGEKLWCTNGV 222

Query: 240 -SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
            +   +++A+   + G   +   + D    G+   R  + +G R+     + F+N     
Sbjct: 223 KAGVIVVMARTPDKNGRSQITAFVVDMDTPGVEVVRRCHFMGLRALYNGVVRFTNVKVP- 281

Query: 299 LGDLNVSTGPVEDMKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               N+     + +++ L  L++  +      V   +  L     +A  R   G  +   
Sbjct: 282 --KENILLAEGKGLRVALTTLNTGRLTLPAACVGLSKRCLEIVRTWANERVQWGSTIGKH 339

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   IA IA +  A  +++   A+  D  K      A  R+ A + K W  + +   +
Sbjct: 340 AAIAAKIARIAAETFAMESMTLYAASLVDRDKH-----ADVRLEAAMCKLWGTERSWEHV 394

Query: 413 AEAMECIGGSGYIEER----------SIARHYRESPANSILLGSGNAMVLDVLN 456
            E M+  GG GY   +           I R +R+S  N I  GS   M L +  
Sbjct: 395 DETMQIRGGRGYETAQSLAARGDNPVPIERLFRDSRINKIFEGSSEIMRLFIAR 448


>gi|39937611|ref|NP_949887.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39651470|emb|CAE29993.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 388

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQ 145
                + D+    P  H   +     G        ++        +A  +  A     A 
Sbjct: 25  DAYWLKKDREGGFP--HDFHKALADAGWLGICVPEAYGGSGLGITEAAIMMRAISESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V   + V +  T    +   P             PM +        +TE 
Sbjct: 83  MSGASAVHINVFGLNPVVVFGTEEQRQRMLP-------------PMVEGRDKACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ +++  ++LA+       R     +   
Sbjct: 130 NTGLNTTQLKTRAVRKGDRYVVNGQKVWISTAQVANKILLLARTTPLEEVRSPTHGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
             D     +    ++ K+G +   + EL F +    +   +G+       + +      +
Sbjct: 190 YADFDRTRIKVHEIE-KMGRKIVDSNELFFEDFEIPVEDRIGEEGKGFHYILEGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V   +++L+ A  YA+ R V    +     ++  +A   +++ AA  +    A 
Sbjct: 249 LIAAEAVGLGKLALSRAADYAKTRIVFNRPIGQNQGIQHPLAKNWVELEAAWLMVMSAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+       A  A+ +A    +  C+       +A+   GG GY +E  + R+ RE  
Sbjct: 309 QYDQGMPCGAAANAAKYLAGEAGFSACE-------QAVMTHGGFGYAKEYHVERYLREVM 361

Query: 439 ANSI 442
              I
Sbjct: 362 IPRI 365


>gi|312221968|emb|CBY01908.1| similar to glutaryl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 426

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/298 (21%), Positives = 110/298 (36%), Gaps = 19/298 (6%)

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYC 227
           +      +  S+E        M K  +    GLTE   G+D  ++ +  +      G Y 
Sbjct: 132 LAMGGIEEFGSQELKDRLLPKMAKGQLLGCFGLTEPNHGSDPGSMETVARPHPTKKGYYS 191

Query: 228 LSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRS 283
           LSG K W  +SP++D  ++ A++E  G++  F+V R   D  P G L    +KNK G R+
Sbjct: 192 LSGSKTWITNSPIADVLLVWAKLESTGKIRGFVVER---DQCPPGTLETPAIKNKNGLRA 248

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           + T  ++  +             G       L       A  ++  +   ++    YA  
Sbjct: 249 SITGMIQLDDCPVSEANMFPEIEGLRGPFSCLNSARYGIAWGTIGALEDCISRTRQYALD 308

Query: 342 RHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R    G  +    ++++ +AD   D A     + ++    DE K+  E       M  + 
Sbjct: 309 RKQFKGNPIAKYQLVQKKLADATTDAAYGILAAHQVGRLKDEGKASPE-------MISMI 361

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  A        E  GG+   +E  I RH           G  +   L +   +
Sbjct: 362 KRQNCDRALVNARTLQEVFGGNAVSDEYGIGRHVANLFVTQTYEGQSDIHALILGRAI 419


>gi|242207282|ref|XP_002469495.1| predicted protein [Postia placenta Mad-698-R]
 gi|220731524|gb|EED85368.1| predicted protein [Postia placenta Mad-698-R]
          Length = 383

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 104/286 (36%), Gaps = 35/286 (12%)

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S      +    +    + + P++              K  +    GLTE   G+D A +
Sbjct: 101 SSLVMHPIHEFGSDVQKEKYLPRL-------------AKGELVGCFGLTEPNHGSDPAGM 147

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272
            +  ++   G        W  +SP++D FI+ A+   +G++  F++ + +E     GL  
Sbjct: 148 ETTAEETDGGFVINGAKTWITNSPIADIFIIWARAKWDGKIHGFVLEKGME-----GLSA 202

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS- 331
             +K+K+  R +AT  +   N        L   +G          L+SA   +S   +  
Sbjct: 203 PAIKHKLALRCSATGSIFMDNVKVGHDAILPHGSGMGA---PFSCLNSARYGISWGAIGA 259

Query: 332 ----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
               +A    YA  RH     L    ++++   D   + A     S ++    D  K   
Sbjct: 260 LEDSIARTRAYALERHQFKRPLASFQLVQKKFVDAHTEAALGLQASLQVGRLKDAGK--- 316

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                A  M  + K   C  A       ++ +GG+   +E  + RH
Sbjct: 317 ----LAPEMISMVKRNNCGKALEHSRRLLDILGGNACSDEYHVGRH 358


>gi|91791082|ref|YP_552032.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
 gi|91700963|gb|ABE47134.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666]
          Length = 388

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 124/357 (34%), Gaps = 32/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           DKV   P  H L R     G    C   +     +   +A  +  A     A L     +
Sbjct: 32  DKVGGFP--HELHRALADGGWLGICLPQEYGGGGLGISEATVMMQAISQSGAGLSGASAV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++     VA   T        P             P+          +TE   G +  
Sbjct: 90  HMNIFGLQPVAAFGTEAQKCRMLP-------------PLIAGREKACFAVTEPNTGLNTT 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN 268
            + ++ +++ D         W  ++ +++  ++LA+       +   F +     D    
Sbjct: 137 RLKTRAERVGDHYVLSGQKVWISTAQVAEKMLILARTTPIEDCQKPTFGLSLFYTDLDRR 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +  + ++ K+G ++  + EL        +   +GD       +        +  A  ++
Sbjct: 197 FVQVREIE-KMGRKAVDSNELFIDGLRVPVEDRIGDEGRGFEYILHGMNPERVLIAGEAI 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +L  A+ YA  R V    +     ++  +A+  +++ AA  ++ R A  +D    
Sbjct: 256 GLGRKALEVAVKYASERVVFDRPIGKNQAIQHPLAESWMELEAAEMMAMRAAWKYDNGLP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +A  A+ MA    +  C+ A       M  +GG GY +E  + R+ RE     +
Sbjct: 316 CGADANAAKYMAAEAGFNACQRA-------MATLGGYGYAKEYHVERYLREMMIPRV 365


>gi|313499838|gb|ADR61204.1| Acyl-CoA dehydrogenase, putative [Pseudomonas putida BIRD-1]
          Length = 388

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 124/356 (34%), Gaps = 21/356 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +RS   G +  +   +              +   L A  EA  L    +    +  
Sbjct: 44  QQVWQRSCEQGFYNIMLPEAIGG--------AGLSVSDLCAVKEATVLTGSMLAPHILGE 95

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L   PR+   +  K+ S         P+ +   A+   LTE   G+D  AI +  ++  +
Sbjct: 96  LSGPPRIGHLF--KVASPTQIEAFLQPVCRAEKAVCFALTESEAGSDATAIKTSARREGE 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++   +P +D  ++LA  +   G   +     D S  G+  +   + +    
Sbjct: 154 HYVLNGAKRYISGAPYADIAVLLAVTDPGRGAQGISAFFVDLSAPGVRVESDYSVMSG-G 212

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            A  ++   +        +G+             L  L      +    ++L  +I YAR
Sbjct: 213 GAHGDIILDDVRVPAANRIGEEGQGFKLAMGRITLNRLLHCPTLLGLAGLALNLSIDYAR 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   IAD+A ++ AA ++ +  A   D   +   +       AP+ 
Sbjct: 273 TRKQFGQPIAMFQSINHMIADMATELHAARSMVYATAAVNDAGGNIRTQ-------APMC 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  + A  +   A++  GG+G +    +   +R +    IL G+       +  
Sbjct: 326 KLFVSETAFRIADRAVQIHGGAGLVRGNPVEWIFRATRMMRILTGTSEIQRNTIAK 381


>gi|33599609|ref|NP_887169.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567205|emb|CAE31119.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 135/389 (34%), Gaps = 48/389 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++  R +     P+ H       + D+   +P     +      G   ++  + ++ 
Sbjct: 11  QEIRDAVRSLCKQFPPEYH------RQVDEKRGYPE--EFVNALTKAGWLAALIPQEYDG 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A +       +             +   + +    T    + + P+I S E    
Sbjct: 63  PGLSMA-EASVIMEEINRSGGNSGACHGQMYVMNTIVFSGTEEQKRKYLPRIASGELR-- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                        +G+TE   G+D   + +   K  DG + ++G K ++S    SD  I+
Sbjct: 120 ----------VQSMGVTEPTTGSDTTKLKTTAVKK-DGRWVINGQKVWISRVQHSDLLIL 168

Query: 246 LAQVEG---------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
           LA+             + CF+V   L+    NGL  + + N + N    T EL F N   
Sbjct: 169 LARTTPVEQVQKRSDGLSCFIVE--LDKAIGNGLTVRPILN-MVNH--ETNELFFDNLEL 223

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG        + +         A   +      L +A  YA  R V G  +    
Sbjct: 224 PEDALLGAEGKGLKVIFEGLNAERTLIAAECIGDGYWFLEKARDYANERKVFGRPIGQNQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A+  +++ AA  + ++  +  D  ++   EA  A+ +A    +           
Sbjct: 284 GIQFPLAECFIELEAANLMRWQACSKIDARQNAGVEANMAKYLAAKASW-------EAAN 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSI 442
             ++  GG G+  E  + R +RE+    +
Sbjct: 337 ACLQTHGGFGFACEYDVERKFRETRLYQV 365


>gi|254515418|ref|ZP_05127479.1| acyl-CoA dehydrogenase family protein [gamma proteobacterium
           NOR5-3]
 gi|219677661|gb|EED34026.1| acyl-CoA dehydrogenase family protein [gamma proteobacterium
           NOR5-3]
          Length = 422

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 114/381 (29%), Gaps = 34/381 (8%)

Query: 93  RWDKVEFH-PAWHALLRRS----IHDGLHCSIWDRSFEPVVRKQAHKI------RAARLY 141
            WD+       W ALLR++    I  G+    +   F                  A  L 
Sbjct: 47  DWDRDGLPNEEWEALLRKAKDLSIEAGIFNYPFPAEFGGRDGGNLGMAIIREHLAAKGLG 106

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L   L+  H +  +     ++    T      W   + +                    G
Sbjct: 107 LHNDLQNEHSIVGNNIGLLLMLKYGTDEQKAQWLDGMAT-------------ARQGFAFG 153

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPR 260
           +TE   G+D   + +   +  D         W      +DA +++A+  G  G    +  
Sbjct: 154 ITEPEHGSDATYMETNAVRDGDHWIINGEKTWNTGVHTADADMVMARTSGAPGDALGITA 213

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317
            L     +G+  +       N  +    + F++     G + G        ++       
Sbjct: 214 FLVPMKASGVKVEEYLWTF-NMPSDHARVSFTDVRVPQGAIFGGEGKGLMVIQHFFNENR 272

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  S+   +  + EA+ +A+ R   G  L     ++  + ++        AL  + A
Sbjct: 273 IRQAASSLGAAQYCVNEAVEHAKNRKPFGKPLASNQAIQFPLVELNARCEMLRALIHKTA 332

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D   + S           +  Y   ++       AM+  GG GY   +     YR  
Sbjct: 333 WLMDRDGAFS-----VSDKVSMCNYQANRLCCEAADFAMQVHGGMGYSRYKPFEHIYRHH 387

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  G+    +      L
Sbjct: 388 RRYRITEGADEIQIRRAAGYL 408


>gi|25029333|ref|NP_739387.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259505665|ref|ZP_05748567.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23494621|dbj|BAC19587.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259166747|gb|EEW51301.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 980

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 105/332 (31%), Gaps = 27/332 (8%)

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           + + A  L          +      + + +    +     +W P++   E          
Sbjct: 658 YGLAAQELEAGDSGLRTFVSVQGSLAMAAIHKHGSLDQKLEWLPRMARGE---------- 707

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
                   GLTE   G++ AA+ +  ++            +W   + ++D  I+ AQ E 
Sbjct: 708 ---AVGCFGLTEPTAGSNPAAMKTFARQEPGGDWVLNGTKRWIGLANIADVAIIWAQTEE 764

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
                 V   +      G   Q ++ K+  R++   E+   +        L   +     
Sbjct: 765 FGDGRGVRGFVVPTDTPGFSAQVIEPKLSMRASVQCEITLEDVRLPYTAMLPKDSAVGLR 824

Query: 312 MKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                 L+ A   +        R S   A+ Y+  R   G  L    + +  +AD+A+ I
Sbjct: 825 G-PFSCLNEARYGIVWGVLGAARDSFNSALEYSHHREQFGTPLTHFQITQTKLADMAVAI 883

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L+  +    D      E       M    K    ++A  +  +A   +GG+G   
Sbjct: 884 NKGYHLAHHIGRLKDTTGVTPE-------MISTGKLDNTRIAIQIARDARAMLGGNGISM 936

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + S  RH     +     G+     L +   +
Sbjct: 937 DYSPLRHANNLESVRTYEGTDEVHQLTIGRFI 968


>gi|310819471|ref|YP_003951829.1| acyl-CoA dehydrogenase-like protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392543|gb|ADO70002.1| Acyl-CoA dehydrogenase-like protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 393

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 98/285 (34%), Gaps = 17/285 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E        M +  +    GLTE   G++   + ++  K  D         W  +  +
Sbjct: 113 SDEQKERLLPGMAQGRLIGCFGLTEPDFGSNPGGMRTRAVKDGDTWVLNGAKAWITNGAI 172

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A+ E   G   +   L +    G   + +  K   R++ T EL F +      
Sbjct: 173 ADVAVVWAKTE-EGGAESIRGFLVEKGMPGFTAREIPGKFSLRASVTSELSFQDVRVP-- 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVS-GGILIDQP 353
              NV          L  L++A + ++      A A       YA  R    G  +    
Sbjct: 230 -GRNVLPKVTGLRGPLSCLNNARLGIAFAVTGAAIACFEGAREYALARKQFDGKSIAGYQ 288

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           + +  +AD+  +I  A  L+ RLA   DE K+         +M  + K    K A  +  
Sbjct: 289 LTQEKLADMLQEIVKAQLLALRLARLKDEGKATP-------VMVSLAKRNNVKAALDIAR 341

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            A    G +G  +     RH     +     G+     L +   +
Sbjct: 342 SARGVYGANGITDAYPPVRHMLNLESVFTYEGTHEVHTLVLGKAI 386


>gi|325524058|gb|EGD02234.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 388

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 118/356 (33%), Gaps = 38/356 (10%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H   H         G                    +  A L++    E G   + S    
Sbjct: 35  HEFPHEFFAAVASGGWLGICMPEDVGGANL----GVTEAALFMRTVAECGGQAAASTIHM 90

Query: 160 SM-----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           ++     V    T    K W P     E+                  +TE   G D   +
Sbjct: 91  NIFGLQPVVHFGTDAQKKAWLPPFARGEHK-------------ACFAVTEPDTGLDTTKL 137

Query: 215 TSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNG 269
               +K  DG Y LSG K F+ ++ ++D  ++LA+       +     +           
Sbjct: 138 KVVAKKQPDGNYLLSGKKVFISTAQVADHMLILARTTPIEEVKKHSEGLSLFYTKLDRKY 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  + + +K+G  +  T EL   +       L+G+       +        +  A   + 
Sbjct: 198 VEIREI-DKLGRAAVDTNELFIDDMPVSKDALIGEEGKGLSYIFHGMNAERVLVAAEQIG 256

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R  L  A  YA+ R V G  +     ++  +A    ++ AA  + F  A+ +D+    
Sbjct: 257 IGRAVLKLATQYAKERVVFGRPIGQNQGVQHPLARNWAELEAANHMIFAAADLYDKGLPC 316

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             EA  A+++A       C+        ++   GG GY +E  + R  RE+    I
Sbjct: 317 GSEANAAKLLASEACMNACQT-------SILTHGGFGYAKEYHVERFMREAWIGYI 365


>gi|239918776|ref|YP_002958334.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281414998|ref|ZP_06246740.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239839983|gb|ACS31780.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 408

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 28/373 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
              +D   F      ++      G+    ++    P      + + A  L          
Sbjct: 49  ARWYDDAVFP---REIVPELGRLGVLGMPYEGHGMPGRSAVEYGLAAQELEAGDSGLRTF 105

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +      +   +    +      W P++   E                  GLTE   G+D
Sbjct: 106 VSVQGSLAMGAIHKHGSEEQKAQWLPRMTIGE-------------AVGCFGLTEPGAGSD 152

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            A++T+  ++   G + L G K ++  + ++D  I+ AQ         V   +      G
Sbjct: 153 PASMTTTARQEPGGDWVLDGVKRWIGLATLADVAIIWAQTGEPGDGRGVRGFVVPTDTPG 212

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSV 325
              + +  K+  R++   E+            L     V                   ++
Sbjct: 213 FRAEAITQKLSMRASVQCEIHLDGVRLPASAMLPADSAVGLKGPFQCLNEARYGIIWGAM 272

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R S    + YA  R   G  L    + +  +AD+A+ I     L+ ++  + D    
Sbjct: 273 GAARDSFDAVLDYAMERQQFGVPLASHQLTQAKLADMAVAIGKGYLLAHQIGRAKDAGPL 332

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     M    K   C++A  +  EA E +GG+G   E S  RH     +     G
Sbjct: 333 TPA-------MISAGKLDNCRVAIGIAREAREMLGGNGITLEHSPLRHANNLESVRTYEG 385

Query: 446 SGNAMVLDVLNLL 458
           +     L +   L
Sbjct: 386 TDEVHQLTLGRHL 398


>gi|330823850|ref|YP_004387153.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309222|gb|AEB83637.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 549

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/375 (20%), Positives = 136/375 (36%), Gaps = 46/375 (12%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRK-----QAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           LL+     G+       ++           Q        L   +   AG L++     A 
Sbjct: 184 LLQPLREMGVFGLSIPEAYGGTAPGSHDDTQMMVAVTEALSEGSLGAAGSLITRPEILAR 243

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + W P +   E                 + +TE   G+D+A +  +  +
Sbjct: 244 ALLAGGTEAQKRRWLPALAVGE-------------PLCAIAMTEPDFGSDVAGLQLKATR 290

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDG------------S 266
              G        W   +  +   +++A+ +     G   +  LL +              
Sbjct: 291 AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHRGLSLLLVEKPAFEGHEFAVAQE 350

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDS 320
             G  + R    IG R   + +L F N F      + GD  +  G    M  ++   + +
Sbjct: 351 GGGTLHGRAIPTIGYRGMHSFDLVFENFFVPDENLVGGDAGLGKGFYFTMTGMMGGRMQT 410

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++  MR ++  AI YA  R V G  L+   + +  IA +A    A   L++ +A   
Sbjct: 411 AGRALGVMRAAVRAAIRYAGDRQVFGAPLVSYQLTQVKIAAMAARFVACRWLAYDVARLL 470

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    R E        A + K   C+ A  V  EA++  GG GY EE +++R++ ++   
Sbjct: 471 DAGGGRME--------ASLVKLLACRSAELVTREALQIHGGMGYAEETAVSRYFVDARVL 522

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+   + L V+
Sbjct: 523 SIFEGAEETLALKVI 537


>gi|312196725|ref|YP_004016786.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
 gi|311228061|gb|ADP80916.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EuI1c]
          Length = 396

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 142/403 (35%), Gaps = 43/403 (10%)

Query: 68  CTAQELARM-ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              + LAR  A      L A+      WD+    PA           GL+          
Sbjct: 16  AALRALARQVAERELAPLAAH------WDETGEWPA--KSQAAIAQAGLYGIAVPEEHGG 67

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDP 185
               Q            A + +      ++     ++  + TP + + W P+  S E   
Sbjct: 68  AGLGQVEVTIVLEELARACVNSAVTAQLTLNGPPRVLGHLGTPAMRERWLPRAASGE--- 124

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFI 244
                         LG+TE   G+ +  + ++ +   DG Y L+ +K + +    +DA +
Sbjct: 125 ----------AVFCLGITEAEAGSAVQRMRAKVEPDGDG-YRLNAYKNYSTQGHRADACL 173

Query: 245 MLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLL 299
             A+   G +G      ++ D +  G+        +G   +   EL F N        LL
Sbjct: 174 CWARFPNGEIG-----AVVVDMTSEGVGVAGTHRNMGLHGSTEAELTFDNVRIEPDEVLL 228

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                S   +        L +A M +   + +L  A  Y R R      L D   ++  +
Sbjct: 229 DGSPGSFRTLLGHLNHERLGNAAMCLGAAQGALEHATRYLRERPAGSRRLADLQGLQWKV 288

Query: 360 ADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           A++A ++ AA  L +R A+     +   + E A A+  A +        A  V  EAM+ 
Sbjct: 289 AEMATELEAARLLVYRAAHLAGPHESPPALETAMAKGKANMV-------ARMVCDEAMQL 341

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
            GG GY  E  + R YR+    S   G+   +   V   +  G
Sbjct: 342 HGGYGYSREFPVERAYRDVRGLSFGGGTVEVLKNYVGARIADG 384


>gi|237729335|ref|ZP_04559816.1| crotonobetainyl-CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|283835101|ref|ZP_06354842.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|226909064|gb|EEH94982.1| crotonobetainyl-CoA dehydrogenase [Citrobacter sp. 30_2]
 gi|291069398|gb|EFE07507.1| crotonobetainyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 380

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 125/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLEAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTQEQIDKIMAFQGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|91780874|ref|YP_556081.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91693534|gb|ABE36731.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 390

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 118/361 (32%), Gaps = 34/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--- 148
            + D     PA     R     GL        +                       +   
Sbjct: 29  RKQDAARSFPA--EYWRTVCEAGLCGVALPEEYGGSGLGMMEMSLIVENLAATGGGSTVG 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M   +     +A      + K+  P I S E +               + LTE   G
Sbjct: 87  QLFMINPIFGGVSIARFGPEAMRKELLPGIISGEIN-------------CCMALTEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           T+   I +      DG        W      ++  +++A+     +       +   + D
Sbjct: 134 TNTLEIRTFASADGDGWRLNGRKIWITGVQSANKMLIVARTKKVADSTSRTDGLSMFMID 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL +  + +K+G  +  +  + F +       L+G L+     + D+     + + 
Sbjct: 194 VQREGLSFTPI-DKLGTCTLDSSSVFFDDVAIEPTELIGTLHQGWRELLDVLNTERIVTT 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              V    +++  A+ YA  R V G   +     ++  +A   +++ AA  L+++ A  F
Sbjct: 253 AGLVGTGELAIQLAVDYANDRKVFGNTPISAYQGLQFPLAQCHVEVQAARLLNYKAATQF 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A+++A        + A       M+ +GG GY +E  + R +R+    
Sbjct: 313 DMGLPYGSEANAAKLLAAQAVSRATERA-------MQTMGGMGYSKEFHVERLWRDCRLF 365

Query: 441 S 441
            
Sbjct: 366 R 366


>gi|33602107|ref|NP_889667.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33576545|emb|CAE33623.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 387

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 119/351 (33%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G       +++          I  A L +       A L     +  ++ 
Sbjct: 39  HEFHQALAQAGWLGIAMPQAYGGAGL----GISDAALMMHTIAATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  T +  + W P             P+         G+TE   G +   + ++
Sbjct: 95  GLHPVVVFGTAQQKQRWLP-------------PLIAGQDKACFGVTEPNTGLNTLKLKTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         W  ++ +++  ++LA+        G   +     D     +    
Sbjct: 142 AVRQGDHYVVTGQKVWISTAQVANKILLLARTTPIEACTGSEGLSLFYTDLDRAAIEVHE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   + +L   N    +   +G+       +        +  A  +V   R +
Sbjct: 202 IE-KMGRKCVDSNQLFIDNLRIPVEDRIGEEGKGFSYILHGLNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YAR R V    +     ++  +A   +++ AA  +  + A  +D+ +    EA 
Sbjct: 261 LRKAAGYAREREVFDRPIGKNQGVQHPLARSWMELEAAHLMVQKAAWLYDQQQPCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +     Y  C+ A       +   GG GY +E  + R+ RE+    +
Sbjct: 321 SAKFLGAEACYAACENA-------IFTHGGMGYAKEYHVERYLREAWIPRL 364


>gi|226363157|ref|YP_002780939.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241646|dbj|BAH51994.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 422

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 124/391 (31%), Gaps = 43/391 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P  H    G ER D   F       +     +GL    +                A  + 
Sbjct: 54  PVAHRIAGGDERLD--GFPRDAFEAM---AAEGLFRIPFAADVGGAGLTHRATATAVAVE 108

Query: 142 LMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
            +A           V    A       T    + W   I   E                 
Sbjct: 109 ELAYYSNSVAAIYDVHCILAGTALDQGTDDQRRCWLRPIVDGEM-------------VGA 155

Query: 200 LGLTEKRGGTDIA--AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
              +E    +D++  A++++     DG       +W  +S ++   ++LA+    +  F+
Sbjct: 156 FATSEPGASSDLSPDAVSTEAIPDGDGWILRGRKRWITNSVVAGVVVVLARTGDTLTTFI 215

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-GFLLGDLNVSTGPVEDMKILI 316
           VP      S  G+       K+GNR   T ++   +   G       V  G    ++ L 
Sbjct: 216 VPT-----SAAGVTIGTPDRKLGNRGQITADVHLDDVRLGPESVLGRVGGGLRIALQTLT 270

Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +      V   + +    + + + R   GG L  +   +  +AD A D+ AA +L  
Sbjct: 271 YGRIGIGAAGVGMAQAAFDRTVAHLKSRQAFGGSLASKQHWQFVMADYAADLEAARSLYL 330

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-------E 427
           + A   D  +   E        A + K     +A  +  +A++  GG G++        E
Sbjct: 331 KAALRLDAGERFPE------PEAAMAKLRGTDLAARIARDAVQAFGGLGFVRSLGADDTE 384

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   YR+S    I  G+       +   +
Sbjct: 385 GPVEAIYRDSKIGEIYEGANEIQRWVLARQI 415


>gi|78060403|ref|YP_366978.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964953|gb|ABB06334.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 122/364 (33%), Gaps = 40/364 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              DK    P  H         G                    +  A L++    E G  
Sbjct: 29  RNKDKNHQFP--HEFFDAVASGGWLGICMPEDVGGANL----GVTEAALFMRTVAECGGQ 82

Query: 152 MSPSVTSASM-----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
            + S    ++     V    +    + W P     E+                  +TE  
Sbjct: 83  AAASTIHMNIFGLQPVVHFGSDAQKQAWLPPFTRGEHK-------------ACFAVTEPD 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRL 261
            G D   +    +K  DG Y +SG K F+ ++ ++D  ++LA+       +     +   
Sbjct: 130 TGLDTTKLKVVAKKQPDGNYLISGKKVFISTAQVADHMLILARTTPIEQVKKHSEGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
                   +  + + +K+G  +  T EL   +       L+G+       +        +
Sbjct: 190 YTKLDRRYVDIREI-DKLGRAAVDTNELFIDDLPVSKDELIGEEGKGLSYIFHGMNAERV 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A+  V   R  L  A  YA+ R V G  +     ++  +A    ++ AA  + F  A+
Sbjct: 249 LVAVEQVGIGRAVLNLATQYAKERVVFGRPIGQNQGVQHPLARNWAELEAANHMIFAAAD 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +S   EA  A+++A       C+ A       +   GG GY +E  + R  RE+ 
Sbjct: 309 LYDRGQSCGSEANAAKLLASEACMNACQTA-------ILTHGGFGYAKEYHVERFMREAW 361

Query: 439 ANSI 442
              I
Sbjct: 362 IGYI 365


>gi|67642897|ref|ZP_00441648.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121600127|ref|YP_993855.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124383525|ref|YP_001026919.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Burkholderia mallei NCTC 10229]
 gi|121228937|gb|ABM51455.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|238524113|gb|EEP87548.1| acyl-CoA dehydrogenase [Burkholderia mallei GB8 horse 4]
          Length = 367

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 115/299 (38%), Gaps = 45/299 (15%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P +    R+ +  G         ++     +   I    + ++        + P +T  
Sbjct: 74  TPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPK--LIATPCIEMLNASNLSFALCPLLTDG 131

Query: 160 SMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           ++ AL+T  T      + PK+ S E+  T             + LTE + G+D+A + S+
Sbjct: 132 AIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGSDLALVRSR 178

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-- 264
            +   DG Y + G K F++    D       ++LA+          +  F+VP+ L +  
Sbjct: 179 AEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDD 238

Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
              G+ N +    +++K+G +++ T  L++ +     G+L+G+ N     +  M      
Sbjct: 239 GSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARF 298

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAA 368
              +  +     +  +A  +A+ R  S            +I  P ++R +A +      
Sbjct: 299 GVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEG 357


>gi|258573685|ref|XP_002541024.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237901290|gb|EEP75691.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 429

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 91/469 (19%), Positives = 159/469 (33%), Gaps = 78/469 (16%)

Query: 2   TLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL 61
           T   I +R A +   +                 N Y++D                     
Sbjct: 20  TSSNITKRCASSSAARFDWQ-------DPLNAANLYTAD--------------------- 51

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
            E  ++ TA++  +        L AY    E +DK         +L+     GL  +  D
Sbjct: 52  -ELAIAETARQYCQE-RLMPRVLEAYRK--EDYDKT--------MLQEMGELGLLGATID 99

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 V   A  +    +  +       +   S  + + +    T    + + P++   
Sbjct: 100 GYGCAGVSTVASGLITKEVERVDSGFRSGMSVQSSLAMTGIHEFGTKEQKEKYLPEL--- 156

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSG-HKWFLSSP 238
                      K  +    GLTE   G+D  ++ +  +      G   L+G   W  +SP
Sbjct: 157 ----------AKGKLIGCFGLTEPNHGSDPGSMETVARPHPTKKGYLSLTGAKTWITNSP 206

Query: 239 MSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           +SD F++ A++E  G++  F++ R   D  P G L    +KNK   R++ T  ++  N  
Sbjct: 207 ISDLFLVWAKLEATGKIKGFIIQR---DQCPTGTLETPTIKNKTALRASITGMIQLDNCP 263

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVS-GGIL 349
                 L    G V        L+SA + ++      +   +  A  Y+  R    G  L
Sbjct: 264 VPEENMLPDVEGLV---GPFTCLNSARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPL 320

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++++ +AD A D A  T  + ++A   DE K   E       M  + K   C  A 
Sbjct: 321 AKYQLIQKKLADAATDAAYGTLAAVQVARLKDEGKCTPE-------MISMIKRQNCDRAL 373

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  E  GG+   +E  I RH           G  +   L +   +
Sbjct: 374 VGARTLQEVFGGNAASDEYHIGRHVANLFVAQTYEGQSDIHSLILGRAI 422


>gi|88855626|ref|ZP_01130289.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
           PHSC20C1]
 gi|88814950|gb|EAR24809.1| putative glutaryl-CoA dehydrogenase [marine actinobacterium
           PHSC20C1]
          Length = 394

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 117/351 (33%), Gaps = 26/351 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL    W  +             A  L  +    A  +   +      + +  +   
Sbjct: 60  ADLGLFGLPWAETQPFKNSAVFRGWIALELARVDASAATLVGMQNGLVMGSIGVAGSEEQ 119

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLS 229
             +W PK  S E             +    GLTE   G+D A  + +  ++  D      
Sbjct: 120 RAEWLPKFASGE-------------LLGAFGLTEPLSGSDTAQGLQTVAKRDGDNWIING 166

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
             +W  +  +SD  I+ A+ E           +   S  G    R++NK   R     ++
Sbjct: 167 AKRWIGNGSISDVTIIWARDEADNQVKG---FIVPTSTPGYSATRIENKQALRIVQNADI 223

Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
              N        L  S    E   +L     + A  +V     +   A+ YA  R   G 
Sbjct: 224 VLENVVVPETNRLQKSQSFRETAAVLRLTRAEVAWAAVGNSIGAYEAAVKYADERIQFGK 283

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +    +++  +A    +I A+  +  R++   DE   + E AA A       K +    
Sbjct: 284 SISSHQLVQEHLAKSLGNITASIGMVTRVSEMLDEGIQKDEHAALA-------KEYTTSR 336

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +A   E +GG+G + +  + RH+ ++ A     G+     L V   +
Sbjct: 337 MRETVAWCRELLGGNGIVLDYGVMRHFADAEAIYSYEGTREMNTLIVGRAI 387


>gi|282862724|ref|ZP_06271785.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
 gi|282562410|gb|EFB67951.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE]
          Length = 379

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 127/367 (34%), Gaps = 21/367 (5%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G R  +             +++  L    W     P           A   L  +  +  
Sbjct: 25  GTREQRDALTAGGREAHDAALYGRLADLGWLGVCLPE-EYGGSGGGLADACLFLEETSYG 83

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           ++       +++A     +         F  E    +          + + ++E   G+D
Sbjct: 84  MVPAGGFVTTVIAAKAYEK---------FGTERQRHDVLSGAVRGDVLSIAMSEPGAGSD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           + A+  Q ++ +DG + + G K ++S+     +++L    G      +       +  G+
Sbjct: 135 VGALRCQARREADGTWVIDGQKTWISNAHCAKYVLLVARTGEDKHGGLTMFHLPAATAGV 194

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
             +R+ + +G R     ++  ++       ++G ++     +        L  A   +  
Sbjct: 195 ETRRI-DTMGGREVN--DVFLTDVRLPADAVVGQVDHGWRQLMAGLDHERLFLAANMLGL 251

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +  +A+ Y R R   G  +     ++  IAD+A +I     L   +A   D    + 
Sbjct: 252 ARRAFDDAVGYVREREQFGRPVGSFQALRHRIADLATEIECTRLLVREVALDCDAQPDKP 311

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                    A + K    ++A     E M+ +GG GY  E  + RH R +  +++  G+ 
Sbjct: 312 -----FPREASMAKLKATEIAKRAALEGMQMMGGYGYTTEFDMERHLRAAVISTVYGGTS 366

Query: 448 NAMVLDV 454
                 +
Sbjct: 367 EIQRDVI 373


>gi|78063490|ref|YP_373398.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77971375|gb|ABB12754.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 120/358 (33%), Gaps = 38/358 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           + H   H         G         F          +  A L+L A  E G   + S  
Sbjct: 33  KHHEFPHEFFDAVASGGWLGICMPEEFGGANL----GVTEAALFLRAAAECGGQAAASTI 88

Query: 158 SASM-----VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++     V    +    K W P     E+                  +TE   G D  
Sbjct: 89  HMNIFGLQPVVHFGSDAQKKAWLPPFTRGEHK-------------ACFAVTEPDTGLDTT 135

Query: 213 AITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSP 267
            +    +K  DG Y +SG K F+ ++ ++D  ++LA+       +     +         
Sbjct: 136 KLKVVAKKQPDGNYLISGKKVFISTAQVADHMLILARTTPIEQVKKHSEGLSLFYTKLDR 195

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMS 324
             +  + + +K+G  +  T EL   +       L+G+       +        +  A   
Sbjct: 196 RYVDIREI-DKLGRAAVDTNELFIDDLPVSKDELIGEEGKGLSYIFHGMNAERVFVAAEQ 254

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V   R  L  A  YA+ R V G  +     ++  +A    ++ AA  +    A  +D+  
Sbjct: 255 VGMGRAVLKIATQYAKDRVVFGRPIGQNQGVQHPLARNWAELEAANHMMLAAAELYDKGL 314

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           S   EA  A+++A       C+ A       +   GG GY +E  + R  RE+    I
Sbjct: 315 SCGSEANAAKLLASEACMQACQTA-------ILTHGGFGYAKEYHVERFMREAWIGYI 365


>gi|324997580|ref|ZP_08118692.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 384

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 128/375 (34%), Gaps = 25/375 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D+         +LR+    G+        F     +    +  A    +A+ +     +P
Sbjct: 31  DRAASSEFPFEVLRQLGELGVLGIGLPEEFGGTGAEDPVLLGLA-TETLARGDVNLASAP 89

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                  + L+ +  VH         RE        M +    + + LTE   G+D  A+
Sbjct: 90  -----VQIGLIASQLVHGT-------REVQERYLPAMIEGRETVAIALTEPGSGSDAGAL 137

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            +  + +  G            +  + A ++ A+  G      V   L      G+    
Sbjct: 138 ATTAKPVDGGWSLTGEKTAITWACNASAALVYARDPGSSRSRGVSCYLVPLDAPGITVSP 197

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +   +G        +   + F     L+G+       V D          +M +   R S
Sbjct: 198 MPG-MGCLPLGWGSIHLDDVFVPAEHLIGEQGRGFHTVMDHFDFSRAALGLMCLGAARAS 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L EA  YA +R   G  + +   +   +A+ A  + AA  L +R      E K  +    
Sbjct: 257 LDEAAVYATQRESFGRPIGEYQGVSFPLAEHATYLEAARWLCYRALWLRSEGKPHT---- 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               +A ++K+W   +A   I  +++  G  GY  E  + + +R+  A  +  G+     
Sbjct: 313 ---SLASMSKWWPPVVAKDAIEASIKIHGNLGYSAEFPLQQRFRDVMAYLVADGTSEIQK 369

Query: 452 LDVLN-LLEKGTNLF 465
             +   +L +G+  F
Sbjct: 370 RIISREILSRGSAAF 384


>gi|302526466|ref|ZP_07278808.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302435361|gb|EFL07177.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 396

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/380 (15%), Positives = 121/380 (31%), Gaps = 36/380 (9%)

Query: 75  RMANYNTPQLHAYGP---GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131
                   +L A  P     ER ++ EF              G         +       
Sbjct: 18  EDIRRAVRELAARFPDEYWAERDERGEFP---REFYDAFASAGWLGMAIPEQYGGGGLGI 74

Query: 132 AHKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189
                       +         M  ++   + +    + ++ ++  P             
Sbjct: 75  LEAALLLEEVAASGAGMNGCSTMHLTIFGLNTIVKHGSEQLRQEILPGAVDG-------- 126

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249
                S+ +  G+TE   GTD   I++  ++  D         W   +  S   +++A+ 
Sbjct: 127 -----SLHVCFGVTEPDAGTDTTRISTFARREGDSYVVHGRKVWITKAGQSQKMVLIART 181

Query: 250 EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDL 302
             R         +   + D   + +  + +  K+G  +  + E+            +G+ 
Sbjct: 182 TPRDEVEKPTDGMSLFVVDIESDAVQLRAIP-KLGRNAVPSYEVLIDGLQVPESARVGEE 240

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 + D      +  A  ++   R +L  A+ YA  R V G  +     +   +A+ 
Sbjct: 241 GKGFRYLLDGLNPERILLAHEALGIGRAALRRAVRYAGERQVFGRPIGQNQGLAFPLAEA 300

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
           A  + AA  ++   A  +D   S  +EA  A+ +       C         +A++  GG 
Sbjct: 301 ATRLDAAELMARNAAWRYDRGLSCGKEANMAKWL-------CADAGFQAADQAIQTHGGM 353

Query: 423 GYIEERSIARHYRESPANSI 442
           GY  E  + R++RE+    +
Sbjct: 354 GYAREYHVERYFREARLLRL 373


>gi|194290086|ref|YP_002005993.1| acyl-CoA dehydrogenase family protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193223921|emb|CAQ69930.1| Putative acyl-CoA dehydrogenase family protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 389

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 134/392 (34%), Gaps = 34/392 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L A+       D  +   A  AL+R+    G        +    +R    +        
Sbjct: 22  ELDAWCAQHLHVDHSDTDAACRALVRQLGEAGWLRYCVPAAHGGALRALDSRSLCLLRET 81

Query: 143 MAQLE--AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
           +A+ +  A    +     +  + L  +  +   + P++   E                  
Sbjct: 82  LARHDGLADFAFAMQGLGSGAITLAGSDALRAHYLPRVARGE-------------AIAAF 128

Query: 201 GLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
            L+E   G+D+AA+    +   DG          W  +  ++D + +  +     G   +
Sbjct: 129 ALSEPDAGSDVAAMQCSAKLSEDGSHYVIDGAKTWISNGGIADFYCVFVRTGEAPGARGI 188

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             L+ D    GL      + +     AT  L F      +   L  +    +    ++ L
Sbjct: 189 TALVVDADTPGLTIAERIDVMAPHPLAT--LRFDQCRVPVGNRLGEAGQGFK--VAMMTL 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRH-----VSGGILIDQPVMKRAIADIALDIAAATALS 373
           D    SV+   +    A             + GG+L D  + + AI D+A  I AA  L+
Sbjct: 245 DIFRASVAAAALGFGRAALDDALARARARPMFGGVLADLQLTQAAIGDMATAIDAAALLT 304

Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           +R A   D + +  + EAA A+++A        + A  VI  A++  GG G      +  
Sbjct: 305 YRAAWLRDVKGQRTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVRVGTRVES 357

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            YRE  +  I  G+     L +      G   
Sbjct: 358 LYREIRSLRIYEGATEVQKLIIARETLAGHQA 389


>gi|46203726|ref|ZP_00051081.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 332

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 49/299 (16%)

Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           M P +T  ++ AL    +P     + PK+    +  T             + LTE   GT
Sbjct: 1   MYPGLTQGAIAALLVHGSPEQKSTYLPKMVEGAWTGT-------------MNLTEPHCGT 47

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258
           D+  + ++     DG Y L+G K F+S+   D       +++A++EG       +  F+V
Sbjct: 48  DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 107

Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
           P+ L +     G  N +    L++K+G   NAT  + +    G+L+G+ N     +  M 
Sbjct: 108 PKFLVNADGSLGERNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGEENRGLAAMFVMM 167

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIAD 361
               L   +  +    V+   A+ YA+ R                  +I  P ++R +  
Sbjct: 168 NEARLAVGVQGLGQSEVAYQNAVAYAKERLQGRALTGAKEPAKAADPIIVHPDVRRTLMQ 227

Query: 362 IALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           I     AA AL         +A+  ++A+ R        +M P+ K        A    
Sbjct: 228 IRAFNEAARALILWTALNSDIAHRSEDAQQRQAAEDMLGLMTPVVKGVLTDRGFANAGR 286


>gi|206972823|ref|ZP_03233745.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|229182030|ref|ZP_04309326.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
 gi|206731707|gb|EDZ48907.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134]
 gi|228601445|gb|EEK58970.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W]
          Length = 397

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PYANSWEIEQGIPS--DIIKTCAKNGYLGGTLPSEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPV----ACLVPKDSA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   I D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|218781750|ref|YP_002433068.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763134|gb|ACL05600.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 376

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 115/354 (32%), Gaps = 28/354 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +  ++   G         +          +             G  +  +   A  +A 
Sbjct: 40  EVWEKAADLGFLGMHLPEKYSGGGLGMLDSVVTLEEICRKDSTVGVALGYATHGAECLAK 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + + PK+   E                     E + G D+ A      K  D 
Sbjct: 100 WGSDALKEAFLPKVLEGEM-------------LSAGAFGESQRGGDLTAEAVTAVKEGDE 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  +  ++  +I+L +            +L +    GL  + L  K+G    
Sbjct: 147 WVINGQKTYVPNGGLAGFYIVLCKTGDAA-----SLILVEADRTGLSVEGLGRKLGGNMT 201

Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T  + F       G L+G+        ++      +  A  ++     +    + Y + 
Sbjct: 202 PTANIAFDKVRVPAGNLVGEEGKGLAYAKEFTSENKILLAAQALGTAFGAYDRMMEYVKG 261

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L    V +  IAD+A+ I  +  ++++ A   DE K           +  + K
Sbjct: 262 REQFGRKLAQFQVSQHKIADMAVKIELSALITYKAAWVRDEGK-------MDPTLCSMAK 314

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              C+ A  V A++++  GG G++ E  + R YR++    ++ G+       + 
Sbjct: 315 MTACRTAMEVSAQSIQLFGGYGFMTEYEVERSYRDAKTLEVMAGAAAVQKDIIA 368


>gi|294637530|ref|ZP_06715815.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda ATCC 23685]
 gi|291089311|gb|EFE21872.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda ATCC 23685]
          Length = 380

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E      A            +TE   G+D+ ++ +   + +  +Y      +  SS  + 
Sbjct: 104 EQIDRIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTYTRKNGKVYLNGSKCFITSSAYTP 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+        +      D S  G+   +L+ K+G R ++  E+ F N       L
Sbjct: 164 YLVVMARDGASPDKAIYSEWFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G        V++         A+ +      +  +A  YA +R   G  +    +++  
Sbjct: 223 FGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A +A+ + +   +    A   D     S +AA         KY+C   +  V+  AM+ 
Sbjct: 283 FAHMAIKLNSMKNMLLEAAWKSDNGLMTSGDAAM-------CKYFCANASFEVVDSAMQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G   +  I R +R+   + +  GS    +L +   + K
Sbjct: 336 LGGVGIAGDHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|258573887|ref|XP_002541125.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901391|gb|EEP75792.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 424

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/444 (17%), Positives = 147/444 (33%), Gaps = 44/444 (9%)

Query: 28  PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN---TPQ- 83
           P  F     Y  DS      + +    HK+L       +       A     N    P+ 
Sbjct: 4   PAPFAEPLWYYRDS------SPYYDDSHKKLRQFTREYVENDLMPYAEEWERNGHVPPEA 57

Query: 84  LHAYGPGGERWDKVEFHPAWHALLR-RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +  Y   G         P     +   ++  G+    WD     VV  +  ++  + + L
Sbjct: 58  VRKYVEKGFAI----IKPTKREYMGGMTMPAGIEPEKWDVFHNLVVNDELSRVGFSGV-L 112

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                   +  P       +      +  + + P++   E                 LG+
Sbjct: 113 WGMNGGNGIGCP------PIMNFGNEQQRQKYLPRVARGEIR-------------FCLGI 153

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           TE   G+D++ I +  +++ D        KW +++ +   +   A   G  G   +  L+
Sbjct: 154 TEPDAGSDVSGIKTTARRVGDKYIVNGAKKW-ITNGIFADYCTAAVRTGGPGRKGISLLI 212

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
              +  G+  +++ N  G  ++ +  LEF +       L+G  N     V        L 
Sbjct: 213 IPLNSKGVSRRQMYNS-GVNASGSTFLEFDDVEVPAENLVGKENHGFKYVMSNFNPERLG 271

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   +   RV + +A +YA  R   G  LI+  +++  ++     I    A   +LA +
Sbjct: 272 MASSCIRLSRVCVEDAFNYAITRETFGQPLINNQIIRAKLSKFGQLIEPCQAFMEQLAYT 331

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRE 436
                   +E      M  + K    +    V  EA + +GG+GY    +   I    R+
Sbjct: 332 IQLNAKTGKEVD-VGGMTALLKVMSTRCLEKVCREAQQILGGAGYNKAGKGARIEAISRD 390

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
                +  GS   +    +    K
Sbjct: 391 VRVFVVGGGSEEILRDLAVRQEMK 414


>gi|35186984|gb|AAQ84159.1| PlmL [Streptomyces sp. HK803]
          Length = 388

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 117/385 (30%), Gaps = 30/385 (7%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
              ER ++    P   W  L       G         +          +    ++  +  
Sbjct: 24  RWAERIEETGEVPEAVWSELDEL----GFLRLAAPVEYGGQGLGFTQWMELMEIFSRSHG 79

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               ++         +         K +               P     + I   LTE  
Sbjct: 80  SLRMIVHVVNGIWRSMDGHACDEQRKRFV-------------VPSVLGEIKIAFALTEPG 126

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            GT  A IT+   +  D  Y              D +++ A+V G  G      LL   +
Sbjct: 127 NGTG-ADITTSVVREGDTYYLSGRKHLITFGMRCDYYLLAARVAGSAGHEGTVALLVPRN 185

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL----IYLDSAI 322
             G+  +     +G        + F  T   +   L      +E           +  A+
Sbjct: 186 APGVSAEDTSRTMGVTGTDHASIVFDRTPVPVDHRLGEEGQGLEVFLGGFLTPSRISVAM 245

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             V   + +   A+ YAR R   G  L ++  ++  +A+ A DI AA  L    A  F+E
Sbjct: 246 SCVGLAQRAQQLAVDYARSRVTFGKSLTERQAIQFMLAENAADIEAARQLVLHAARRFEE 305

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  A  A + + + K     M   V  +A++  GG GY + + I R YR++ A   
Sbjct: 306 G------ADDASMQSSMAKMHAVTMLTTVTDKALQVHGGLGYWKSQKIERVYRDARAQRF 359

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQ 467
             G        V   L +       
Sbjct: 360 EEGPNEVQKAVVFRELLRQAGTVTA 384


>gi|54025014|ref|YP_119256.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54016522|dbj|BAD57892.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 421

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 114/361 (31%), Gaps = 38/361 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPR 169
            +GL    +                A  +  +A           V    A       T +
Sbjct: 78  AEGLFRIPFPADVGGENLAHRATATAVAVEELAYHSNSVAAIYDVHCILAGTALDQGTDQ 137

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD--IAAITSQGQKISDGIYC 227
             + W   I + E             +      +E    +D   AA+ +  +   DG   
Sbjct: 138 QRRRWLRPIVTGE-------------IVGSFATSEPGAASDLSPAAVRTVAEPHGDGWIL 184

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
               +W  +S ++   ++LA+    +  F+VP      S  G+       K+GNR   T 
Sbjct: 185 HGRKRWITNSVVAGVVVVLARTGDALTTFIVPT-----STPGVTIGTPDRKLGNRGQITA 239

Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           ++           +LG +               +      V   + +    + + + RH 
Sbjct: 240 DVLLDGVRLGPDAVLGRVGGGLRIALQTLTYGRIGIGAAGVGMAQAAFDRTVAHLKSRHA 299

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            GG L      +  +AD A D+ AA +L  + A   D  +   E        A + K   
Sbjct: 300 FGGSLASTQHWQFPMADYAADLEAARSLYLKAALRLDAGERFPE------PEAAMAKLRG 353

Query: 405 CKMAPAVIAEAMECIGGSGYIEE-------RSIARHYRESPANSILLGSGNAMVLDVLNL 457
            ++A  +  +A++  GG G++           +   YR+S    I  G+       +   
Sbjct: 354 TELAARIARDAVQAFGGMGFVRSLGADDTPGPVEAIYRDSKIGEIYEGANEIQKWVLARQ 413

Query: 458 L 458
           +
Sbjct: 414 I 414


>gi|254385845|ref|ZP_05001164.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|254387164|ref|ZP_05002433.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194344709|gb|EDX25675.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345978|gb|EDX26944.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 390

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 133/416 (31%), Gaps = 41/416 (9%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
             EL    +  +  T +  A  A+   P +  +   GE        P    L R     G
Sbjct: 12  LDELLSDEDRAVRDTVRGWA--ADRVLPHIAEWYENGEL-------PGIRDLARELGSIG 62

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASMVALMTTPRVHK 172
                   +        A +   A L L A        +      +   +    +    +
Sbjct: 63  --ALGMSLTGYGCAGASAVQYGLACLELEAADSGIRSLVSVQGSLAMYAIWKYGSEEQKQ 120

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W P + + E             +    GLTE   G+D AA+ +  ++            
Sbjct: 121 RWLPGMAAGE-------------LIGCFGLTEPDVGSDPAAMRTYAKRDGTDWVLTGRKM 167

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W  +  ++   ++ AQ +  +  F VP         G     +K+K   R++ T EL   
Sbjct: 168 WITNGSVAAVAVVWAQTDEGIRGFAVPT-----DSAGFSAPEIKHKWSLRASVTSELVMD 222

Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILI 350
           +        L   TG    +  L +    I+  S+   R S   A+ YAR R   G  + 
Sbjct: 223 DVRLPADAVLPGVTGLKGPLGCLSHARYGIIWGSMGAARASFESALDYARTREQFGKPIG 282

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
              + +  +AD+AL++     L+  L    D    R E+           K    + A  
Sbjct: 283 GFQLTQAKLADMALELHKGILLAHHLGRRMDAGTLRPEQ-------ISFGKLNNVREAIE 335

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
           +   A   +G +G   E  + RH     +     G+   M   VL     G + F 
Sbjct: 336 ICRTARTVLGANGISLEYPVMRHATNLESVLTYEGTVE-MHQLVLGKALTGLDAFR 390


>gi|118471836|ref|YP_889092.1| FadE121 [Mycobacterium smegmatis str. MC2 155]
 gi|118173123|gb|ABK74019.1| FadE12_1 [Mycobacterium smegmatis str. MC2 155]
          Length = 402

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 127/365 (34%), Gaps = 40/365 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLM 152
           D+    P            G         +             A         + A   +
Sbjct: 38  DQAHEFP--QEFYDAIAGGGWLGMTIPEQYGGHGLGITEATILAEEVARSGGGMNAASAI 95

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     V +  +  +  +  P+I   +               +  G+TE   G D +
Sbjct: 96  HMSIFGMQPVVVFGSDEMKAETLPRIVDGDLH-------------VCFGVTEPGAGLDTS 142

Query: 213 AITSQGQKISDG---IYCLSGHKWFLS-SPMSDAFIMLAQVE--------GRVGCFLVPR 260
            IT+  ++  D     Y ++G K ++S +  S+  ++L + E        G      +  
Sbjct: 143 RITTFARRDGDHPDADYVVNGRKVWISKALESEKILLLTRTESREDVEKRGGKPTEGLSL 202

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
            L D   + +  + + NK+G  + ++ EL   +    +   +G+     G +        
Sbjct: 203 FLTDLDRDHVDIRPI-NKMGRNAVSSNELFIDDLRVPVEHRIGEEGKGFGYILHGLNPER 261

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  ++   RV+L  A+ YA  R V    +     ++  +AD    + AA  +  +  
Sbjct: 262 MLIAAEALGIGRVALDRAVKYANDRVVFDRPIGMNQGIQFPLADSLARLDAAELVLRKAT 321

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D  K    EA  A+ +       C     A    A++  GG GY EE +I+R +RES
Sbjct: 322 WLYDNGKPCGREANMAKYL-------CADAGFAAADRALQTHGGMGYSEEYNISRFFRES 374

Query: 438 PANSI 442
               I
Sbjct: 375 RLMKI 379


>gi|324997768|ref|ZP_08118880.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 393

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 122/390 (31%), Gaps = 42/390 (10%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
             +A   TP +  +                  L+      GL  +       P      +
Sbjct: 29  GFVAERVTPHVADWFERAH---------LPRELIPELGRAGLLGAHLHGPGCPGRSAVEY 79

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            + AA L          +      + + +    T    + W P + + E           
Sbjct: 80  GLAAAELEAADSGIRTIVSVQGSLAMTAIDRFGTDEQRERWLPGMAAGE----------- 128

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
             +    GLTE   G+D A++T++ +   DG       +W   + ++D  ++ A+    +
Sbjct: 129 --LVGCFGLTEPGSGSDPASMTTRAEPDGDGWVLHGAKRWIGLATIADVAVVWARTPDGI 186

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             F VP        +G     ++ K+G R++   ++            L  +TG      
Sbjct: 187 RGFCVPT-----GTDGFTATPIEPKLGLRTSVQADVVLDGVRLPGDAVLPGATGLR---G 238

Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
               L+ A   +    +  A      A  Y   R   G  L    + ++ + D AL++  
Sbjct: 239 PFTCLNEARYGIMWGAMGAARDAWTTAWRYTLERRQFGTPLAAFQLTQQKLVDTALELQK 298

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              ++ R     D  + R E+         + K    + A  +   A   +GG+G     
Sbjct: 299 GMLVALRTGRLKDAGRLRPEQ-------ISVGKLNNVREAIDICRTARTMLGGNGLSAAY 351

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
              RH     A     G+     L +   L
Sbjct: 352 PPLRHAANLEAVRTYEGTDEIHTLILGRAL 381


>gi|113868557|ref|YP_727046.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113527333|emb|CAJ93678.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 388

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 120/359 (33%), Gaps = 31/359 (8%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL- 151
           WD+++    + H   +     G        +F              +    +        
Sbjct: 28  WDRLDKSGTYPHEFYKTLCEGGWLGVAMPEAFGGAGLGILEAALVMQTISQSGAGMTGAS 87

Query: 152 -MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +V   + V +  T      + P             P+         G+TE   G D
Sbjct: 88  AVHMNVFGLNPVVVFGTDEQKGRFLP-------------PLIAGQEKACFGVTEPDAGLD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS 266
              + +  +K+  G        W  ++ ++D  ++LA+       +     +        
Sbjct: 135 TTKLKTFARKVPGGYSVSGRKIWISTAQVADRMLLLARTTPLESVKKSTEGLSLFYTKVD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIM 323
            + +  + + +K+G  +  T  L   + F      +G+       +        +  A  
Sbjct: 195 RSKIEIREI-DKMGRAAVDTNMLFIDDLFIPEEDRIGEEGRGFEYILHGLNPERILIAAE 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +LA A  YA+ R V G  +     ++  +A   + + +A  +  + A  +D  
Sbjct: 254 AIGLGRAALAIATQYAKERVVFGRPIGMNQGVQHPLAQAWMQLESANLMMLKAAARYDAG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +S   EA  A+ +A    +  C+ A       +  +GG GY  E  + R  RES    I
Sbjct: 314 QSCGAEANTAKYLAAEAGHNACQTA-------ILTLGGMGYSREYRVERLLRESYIPRI 365


>gi|229070970|ref|ZP_04204197.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
 gi|228712152|gb|EEL64100.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185]
          Length = 397

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PYANSWEIEQGIPS--DIIKTCAKNGYLGGTLPSEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPV----ACLVPKDSA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   I D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRTIEKI 387


>gi|183984709|ref|YP_001853000.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium marinum M]
 gi|183178035|gb|ACC43145.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium marinum M]
          Length = 388

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 126/385 (32%), Gaps = 34/385 (8%)

Query: 69  TAQELARMANYNTPQLHAY--GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              E   +   +  +L +          D+    PA     R     G         +  
Sbjct: 4   ELTEDQELIRRSVAELASRFDDHYWMEKDQAHEFPA--EFYRAIADGGWLGMTIPTEYGG 61

Query: 127 VVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                                + A   +  S+     V +  +  +     P + + E  
Sbjct: 62  HGLGITEATILLEEVAKSGGAMNAASSIHLSIFGMQPVVVHGSDELKARTLPSVATGETH 121

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        +  G+TE   G D + IT+  ++  D         W   +  SD  +
Sbjct: 122 -------------VCFGVTEPGAGLDTSRITTFAKRDGDRYVVNGRKVWISKAVESDKIL 168

Query: 245 MLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL-- 298
           +L +     E +     +   + D   + +  + +  K+G  + ++ EL   N    +  
Sbjct: 169 LLTRTQSYDEVKKKTDGMTLFITDLDRSRVEVRPI-RKMGRNAVSSNELFIDNLEIPVED 227

Query: 299 -LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G+       + D      +  A  ++   RV+L +A+ Y   R V G  +     ++ 
Sbjct: 228 RIGEEGNGFQYILDGLNPERMLIAAEALGIGRVALDKAVKYGNEREVFGRPIGMNQGLQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD    + AA  +  +    +D  K    EA  A+ +       C     A    A++
Sbjct: 288 PLADSLARLDAAELMLRKATWLYDNGKPCGREANTAKYL-------CADAGFAAADRALQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG GY EE  +AR++RE+    I
Sbjct: 341 THGGMGYAEEYHVARYFREARLMKI 365


>gi|25026880|ref|NP_736934.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23492160|dbj|BAC17134.1| putative acyl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 432

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 142/409 (34%), Gaps = 36/409 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +    GE VL    +   +   +  P ++ Y      W++ EF    + +L      
Sbjct: 45  LDADFTQ-GERVLRDQVRAFGK--EHILPIINDY------WERAEFP---YEILEPLAGL 92

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL  ++      P + +  + I +  L  +           S  S   + ++ +    + 
Sbjct: 93  GLAGTVIKGYGCPGLSRLENGIVSRELGRIDGSICTFFGVHSGLSMGSINILGSEEQRRR 152

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P              M K        LTE   G+D  ++ +  ++  D        +W
Sbjct: 153 WLPD-------------MAKFRKTGAFALTEPNHGSDSVSLETSARREGDSWVLNGHKRW 199

Query: 234 FLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +    D  ++ A+ E    V  F+V +      P G   + +  K G R+    ++  
Sbjct: 200 IGNGHAGDIIVVYARDEADQQVKAFVVEKQRNGEYPPGYRAEVITGKTGKRAILQGDIVI 259

Query: 292 SNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            N        L       +  ++L       A  S          A  YA +RH  G  +
Sbjct: 260 DNLRIPEENRLTNCHSFKDVNRVLAATRGGVAWESTGHAMAGFELAAQYALQRHQFGSPI 319

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++  +A +  D+     L  R+A   +  +       ++  MA +TK    K A 
Sbjct: 320 ASYQLVQTKLAHMLADVVENQLLCVRMAELQERGE-------FSTPMASLTKMTTAKNAL 372

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  EA + +GG+G +    IARH  +   +    G+ +   L V   +
Sbjct: 373 SICREARDMMGGNGLLLNNHIARHMTDMEVSYTYEGTDSIQALIVGRDI 421


>gi|242238845|ref|YP_002987026.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
 gi|242130902|gb|ACS85204.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 388

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 122/378 (32%), Gaps = 34/378 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSV 156
            F  A++ + R+   + L        F  +             +         +L   + 
Sbjct: 36  VFPDAYYDVCRK---NDLFRLAIPEEFGGMGLNCEQFFSVMEEFCRGPGGMRMNLHHANG 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++       +   W PK+                   I   LTE   G+  A I +
Sbjct: 93  LNWRILYDHGAQDLRAKWLPKL-------------ANKDAYINFALTEAGCGSG-ADIRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQR 274
              +  D  Y L+G K  +S   +SDA  ++A  +        +     + +  G     
Sbjct: 139 TAVRKGD-KYILNGSKTLISHTDISDASYVIAVTDENKRKKGGLTAFFVETNTPGYYIDP 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV---SGMRVS 331
           + + +G R      L F N        +      ++     +    A+++V      +  
Sbjct: 198 MPHMMGCRGAGHAYLRFENCEVPAHNIMGKEGDGLDIFMNALAHSRAMIAVTCLGMSQRF 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  AI  A+ R   G  L  +  +++ +AD+   + A   +    A  FD  +       
Sbjct: 258 LELAIARAKDRVTFGKPLTARQAIQQTLADMGTQVHALRVMLQDCARKFDRGED------ 311

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGN 448
              +++ + K         V    +E  GG GY E+     + R YR++ A     G   
Sbjct: 312 -IEMVSAMCKLHGIDTVRTVSDGCLEIFGGIGYFEDNPYGPVERMYRDARALWFEEGPRT 370

Query: 449 AMVLDVLNLLEKGTNLFE 466
              L +   L +   + +
Sbjct: 371 VQRLTIARPLIESKGVIK 388


>gi|121605026|ref|YP_982355.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593995|gb|ABM37434.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 385

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/360 (20%), Positives = 123/360 (34%), Gaps = 28/360 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ALLR     G  C     +F                   A L   +L   +  +  +++
Sbjct: 41  RALLREMGELGFICPELPEAFGGQGMGCLAAGVIHEEIARADLSFSYLNLLASLNGQILS 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P V K W  K+   E                 + LTE RGG+D A +  + ++  D
Sbjct: 101 KYGNPEVVKPWLHKLTQGE-------------AICAIALTEPRGGSDAANLRLRIERDGD 147

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K  +S+   +D  ++  +  +   G   V  LL      GL   R  +  G 
Sbjct: 148 E-YVINGEKTSISAADQADITVVFGRTGKPEDGAHGVTALLVPMDLPGLSTNRF-DCHGQ 205

Query: 282 RSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+     + F N    +   LGD N     V            +  ++  RV+L E   Y
Sbjct: 206 RAIGRGSIFFENVRVPVSHRLGDENKGFVQVMHGFDFSRSLIGLQVLAVARVALDETWEY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G  L     +   +A    ++  A  L  +     D+    + EA  A+    
Sbjct: 266 ITQRQAFGQPLSSFQGVTHPLAQFDTEVEGARLLCLQGLWLKDKGLPHTAEAGMAKW--- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W  K+A  VI + + C G  GY     + +  R+     I  G+   M   +  + 
Sbjct: 323 ----WGPKLAYDVIHQCLLCFGHGGYDRG-LMEQRLRDVLGFQIGDGTAQIMKTVIARVR 377


>gi|16763463|ref|NP_459078.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56412345|ref|YP_149420.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62178637|ref|YP_215054.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161612401|ref|YP_001586366.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167989932|ref|ZP_02571032.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230337|ref|ZP_02655395.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168234822|ref|ZP_02659880.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168243527|ref|ZP_02668459.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168262254|ref|ZP_02684227.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464389|ref|ZP_02698292.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820953|ref|ZP_02832953.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443251|ref|YP_002039302.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450855|ref|YP_002044039.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470181|ref|ZP_03076165.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738236|ref|YP_002113087.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251657|ref|YP_002145055.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197261694|ref|ZP_03161768.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197361282|ref|YP_002140917.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243212|ref|YP_002214027.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388445|ref|ZP_03215057.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927001|ref|ZP_03218203.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205351414|ref|YP_002225215.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207855587|ref|YP_002242238.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224581913|ref|YP_002635711.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911132|ref|ZP_04654969.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|21542012|sp|Q8ZRX2|CAIA_SALTY RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|75505915|sp|Q57TI8|CAIA_SALCH RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|81677952|sp|Q5PIN6|CAIA_SALPA RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|189081543|sp|A9MYJ9|CAIA_SALPB RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699670|sp|B5F752|CAIA_SALA4 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699671|sp|B5FHG7|CAIA_SALDC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699672|sp|B5R1R2|CAIA_SALEP RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699673|sp|B5RGA6|CAIA_SALG2 RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699674|sp|B4TIH2|CAIA_SALHS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699675|sp|B4T6J8|CAIA_SALNS RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699676|sp|B5BL57|CAIA_SALPK RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|226699677|sp|B4TWR6|CAIA_SALSV RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|254813526|sp|C0Q4L5|CAIA_SALPC RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|16418570|gb|AAL19037.1| putative acyl-CoA dehydrogenase, carnitine metabolism [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56126602|gb|AAV76108.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62126270|gb|AAX63973.1| putative acyl-CoA dehydrogenase, carnitine metabolism [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161361765|gb|ABX65533.1| hypothetical protein SPAB_00090 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401914|gb|ACF62136.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194409159|gb|ACF69378.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456545|gb|EDX45384.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713738|gb|ACF92959.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632678|gb|EDX51132.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197092757|emb|CAR58181.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197215360|gb|ACH52757.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197239949|gb|EDY22569.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197291922|gb|EDY31272.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197937728|gb|ACH75061.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605543|gb|EDZ04088.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323666|gb|EDZ08861.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271195|emb|CAR35983.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205331352|gb|EDZ18116.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334965|gb|EDZ21729.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337402|gb|EDZ24166.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205342470|gb|EDZ29234.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348874|gb|EDZ35505.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707390|emb|CAR31663.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224466440|gb|ACN44270.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261245306|emb|CBG23092.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267991739|gb|ACY86624.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156703|emb|CBW16175.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312911043|dbj|BAJ35017.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320084311|emb|CBY94104.1| probable carnitine operon oxidoreductase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222358|gb|EFX47430.1| Crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615895|gb|EFY12812.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620680|gb|EFY17540.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623969|gb|EFY20806.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627417|gb|EFY24208.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630724|gb|EFY27488.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638056|gb|EFY34757.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640540|gb|EFY37191.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647680|gb|EFY44165.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322656936|gb|EFY53222.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657353|gb|EFY53625.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663673|gb|EFY59873.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666506|gb|EFY62684.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672335|gb|EFY68447.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676353|gb|EFY72424.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679554|gb|EFY75599.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686117|gb|EFY82101.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713089|gb|EFZ04660.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323128390|gb|ADX15820.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323194961|gb|EFZ80147.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200130|gb|EFZ85217.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201049|gb|EFZ86118.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209446|gb|EFZ94379.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212302|gb|EFZ97126.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216607|gb|EGA01333.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219349|gb|EGA03835.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225765|gb|EGA09985.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228694|gb|EGA12823.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236692|gb|EGA20768.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239807|gb|EGA23854.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242145|gb|EGA26174.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249430|gb|EGA33346.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252235|gb|EGA36086.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256674|gb|EGA40404.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261292|gb|EGA44879.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265528|gb|EGA49024.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271684|gb|EGA55102.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326621772|gb|EGE28117.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326626436|gb|EGE32779.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332987025|gb|AEF06008.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 380

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 125/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLEAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|319763886|ref|YP_004127823.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317118447|gb|ADV00936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 549

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 46/375 (12%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRK-----QAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           LL+     G+       ++           Q        L   +   AG L++     A 
Sbjct: 184 LLQPLREMGVFGLSIPEAYGGTAPGSHDDTQMMVAVTEALSEGSLGAAGSLITRPEILAR 243

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + W P +   E                 + +TE   G+D+A +  +  +
Sbjct: 244 ALLAGGTEAQKRRWLPALAVGE-------------PLCAIAMTEPDFGSDVAGLQLKATR 290

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDG------------S 266
              G        W   +  +   +++A+ +     G   +  LL +              
Sbjct: 291 AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHRGLSLLLVEKPAFEGHEFAVAQE 350

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKILI--YLDS 320
             G  + R    IG R   + +L F N        + GD  +  G    M  ++   + +
Sbjct: 351 GGGTLHGRAIPTIGYRGMHSFDLVFENFLVPDENLVGGDAGLGKGFYFTMTGMMGGRMQT 410

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++  MR ++  AI YA  R V G  L    + +  IA +A    A   L++ +A   
Sbjct: 411 AGRALGVMRAAVRAAIRYAGDRQVFGAPLASYQLTQVKIAAMAARFVACRWLAYDVARLL 470

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D    R E        A + K   C+ A  V  EA++  GG GY EE +++R++ ++   
Sbjct: 471 DAGGGRME--------ASLVKLLACRSAELVTREALQIHGGMGYAEETAVSRYFVDARVL 522

Query: 441 SILLGSGNAMVLDVL 455
           SI  G+   + L V+
Sbjct: 523 SIFEGAEETLALKVI 537


>gi|167550749|ref|ZP_02344506.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205324304|gb|EDZ12143.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 380

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 129/378 (34%), Gaps = 30/378 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL------------MAQLEAGHL 151
             L    I + +    W+  F    R   +  R  +                  LEAG +
Sbjct: 9   QELFVAGIRELMASENWEAYFAECDRDSVYPERFVKTLADMGIDSLLIPEEHGGLEAGFV 68

Query: 152 MSPSVTS------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
              +V        A    L   P     +  +  ++E      A            +TE 
Sbjct: 69  TVAAVWMELGRLGAPTYVLYQLPGGFNTFL-REGTQEQIDKIMAFRGTGKQMWNSAITEP 127

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+ ++ +   + +  +Y      +  SS  +   +++A+        +      D 
Sbjct: 128 GAGSDVGSLKTTYTRKNGKVYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDM 187

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
           S  G+   +L+ K+G R ++  E+ F +       + G        V++         A+
Sbjct: 188 SKAGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVAL 246

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +      +  +A  YA +R   G  +    +++   A +A+ + +   +    A   D 
Sbjct: 247 TNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADN 306

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S +AA         KY+C   A  V+  AM+ +GG G      I R +R+   + +
Sbjct: 307 GTITSGDAAM-------CKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRV 359

Query: 443 LLGSGNAMVLDVLNLLEK 460
             GS    +L +   + K
Sbjct: 360 SGGSDEMQILTLGRAVLK 377


>gi|257791608|ref|YP_003182214.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317487976|ref|ZP_07946559.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475505|gb|ACV55825.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912925|gb|EFV34451.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 394

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 127/361 (35%), Gaps = 27/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + +  +  G              +   H+  A  +  +        M+P++     V  
Sbjct: 41  EVAKAWVDSGWGMYGLPEEHGG--KPVDHQTMAMIIEELNHAGGNIPMAPNLLIMFDVCE 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP   K      F+ +Y   N  P         L ++E   G+D   +     +  DG
Sbjct: 99  FGTPEQIK------FAMDYYKENGYPPY------CLAISEPEAGSDNQGMECLATRTGDG 146

Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
              ++G K +++     D FI++ +  +       +   L   +  G+  + L NKIG +
Sbjct: 147 KVHINGVKTWVTQGEHVDGFIVVCKDEDPSRENKNMSMYLVPANAPGVTIEPL-NKIGMQ 205

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYA 339
                 + F +        L +   G  + MK   +    +++  +   + ++ +A  + 
Sbjct: 206 IMPFAMIHFDDVVIDETDLLGIQGKGFYQLMKNFEWERCVLLAELLGEAQAAMEDACAWT 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    +++  I ++ ++++      +R     D     + +AA  +     
Sbjct: 266 NERMQFGKGIKTYQLVQEHIVEMQIELSNTRNFLYRTCWKMDNGIPVNNDAAMLKRYGAP 325

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
               CC       + A++ +GG G+ +E  ++R   +     I  G+   MV      + 
Sbjct: 326 ALTDCC-------SRALQLMGGLGFTDETRVSRLMLDCRGFQIGGGTVEIMVHISGRGIL 378

Query: 460 K 460
           K
Sbjct: 379 K 379


>gi|325673347|ref|ZP_08153039.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325555937|gb|EGD25607.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 380

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 119/360 (33%), Gaps = 29/360 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTS 158
           H     L  +    G         +               L   A+  A    + P++ +
Sbjct: 39  HNHNQDLYLKMADLGWLGITVPEEYGGSAGTA--VDMCILLEQAARGMAPIGGVGPTLIT 96

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            +  A   T    +     I                  +  + ++E   G+D+  ++ + 
Sbjct: 97  GAAYAKFGTDAQKETVLGGIL--------------RGASESISMSEPEAGSDVGNLSCKA 142

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKN 277
           +K+S G        W  ++  ++  +++A+ +        +          GL    +  
Sbjct: 143 EKVSGGWLINGQKTWCSNAHFAENILLVARTDRTGSKHEGLTMFHLPADTPGLKISGIAT 202

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G +     +L  ++       ++G++      +     +  L    M +   + +  +
Sbjct: 203 -MGGKEVN--DLYLTDVLLPEDAVVGEVGQGWTQLMTGLNIERLILGAMMLGTAQRAFDD 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ +  +R   G  +     ++  IAD+A +I     L +  A   D+  ++        
Sbjct: 260 ALEFVTQRKQFGRPVGTFQALRHRIADLATEIECTRLLVYNTARLVDDNPTK-----MFP 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K    + A  V  E M+ +GG GY  E  +  H R++   SI  G+       +
Sbjct: 315 REASMVKLKATETAKKVALEGMQMMGGYGYATEFDMEGHVRKTLVASIYGGTNEIQRDII 374


>gi|300780648|ref|ZP_07090503.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
 gi|300533634|gb|EFK54694.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
          Length = 399

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 126/367 (34%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K E+      ++  +   GL     D   EP +  +A ++ A  L             
Sbjct: 51  WEKAEY---QLHVVEEAGKRGLVRDGIDIEGEPHMSVRAARLMAFELARTDASLGTAFGV 107

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   +A+  +      +                M K  +     LTE   G+D   
Sbjct: 108 QGGLAMQSIAMCGSEEQKAKYLK-------------AMSKLEIRGAFALTEPDHGSDSIG 154

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  ++  D        KW     +    ++ A+             + D   +G   +
Sbjct: 155 LETTAERDGDEWVINGEKKWIGHGSVGHIAVVWARDTSDGQVKG---FIVDQDQDGYEAE 211

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            +  K   R      ++ +N        L  +    +  K+L    +  A  S+      
Sbjct: 212 TITGKASLRGIPQAHIKLNNVRVSEDRRLPNANSFRDTAKVLAGTRISVAWASLGLATDC 271

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
             +A+ YA+RR   G  L+   ++++ +AD+  D+ +      RL    +  +   ++AA
Sbjct: 272 YEKALDYAQRRTQFGRPLVKNQIIQQRLADMLQDLTSMFLYCRRLLELEESGEITEQQAA 331

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A       K  C + A  + A+A +  GG G + E  +ARH+ +  A     G+     
Sbjct: 332 LA-------KVHCTRAARKISADARDMFGGVGILLENDVARHHADIEALHTYEGTDTMQS 384

Query: 452 LDVLNLL 458
           L V   +
Sbjct: 385 LIVGKSI 391


>gi|221066317|ref|ZP_03542422.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711340|gb|EED66708.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 619

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 89/546 (16%), Positives = 180/546 (32%), Gaps = 104/546 (19%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           E +         R  + + PQ           +KV      +         G+  +  D 
Sbjct: 42  ERIAREKYAPFNRTVDLHEPQFDG--------EKVILPQCTYEAREAYAESGMLSAAQDY 93

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
               +      +  A   +  A +  G  M  +  +A+ +    T R  K +A   F+  
Sbjct: 94  EMGGMQLPYTVEAAANCFFAAASISIGSNM-LTSGNANAIMAHGTERQKKVFAANEFNGR 152

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWF 234
           +  T             + L+E + G+ ++ I ++ +              Y L G+K +
Sbjct: 153 WAGT-------------MALSEPQAGSSLSDIATRAEPDGVEYESDALGPRYRLKGNKMW 199

Query: 235 LSSPMSD-----AFIMLAQVEG----------RVGCFLVPRLLED------GSPNGLCYQ 273
           +SS   +       ++LA++ G           +  F+VP+ L D      G  N +   
Sbjct: 200 ISSGDHEMTENIVHLVLAKIPGADGKTIAGVKGISLFIVPKKLVDAEGRLTGERNDVALA 259

Query: 274 RLKNKIGNRSNATVELEFSN-------------------TFGFLLGDLNVSTGPVEDMKI 314
            L +K+G R      L F                       G+ +G        +  M  
Sbjct: 260 GLNHKLGWRGTTNTLLNFGEGRYPVRGQHGGGLDGRGAGAIGYRVGQPGEGLKCMFHMMN 319

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--------------IDQPVMKRAIA 360
              +   + +          ++ YA+ R   G  +              I+   +KR + 
Sbjct: 320 EARISIGMAASMLGMAGYHASLEYAQSRPQ-GRPIGEGGKDASRPQSRIIEHADVKRMLL 378

Query: 361 DIALDIAAATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
                   A AL+   A   DE      +  +E      ++ P+ K W  +      + A
Sbjct: 379 AQKAYCEGALALNLLCARLVDEQYTGQSQEAAEARLLLEVLTPVAKSWPSEFCLEANSLA 438

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL- 472
           ++  GG GY  + ++ +++R++  N I  G+     +D+L   ++  G    + L + + 
Sbjct: 439 IQIHGGYGYTRDFAVEQYWRDNRLNMIHEGTHGIQAMDLLGRKVVMDGGKGLQLLAARIN 498

Query: 473 --------EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524
                    + L S   ++   L D  +  K           + ALA++   +   G   
Sbjct: 499 GTIQRAMQHEKLASHANQLARALADVGAATKAAWASGN---PQEALANAVPYMQAFGHMV 555

Query: 525 IADVFL 530
           +A ++L
Sbjct: 556 LAWIWL 561


>gi|322692414|gb|EFY84327.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 433

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 86/441 (19%), Positives = 152/441 (34%), Gaps = 53/441 (12%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
            +S  + L  + + + +  H+EL+                 A           P    W+
Sbjct: 14  PWSEPAWLRGVHSPYYTSTHRELQR----------------AVR-QYVDTHLLPSALDWE 56

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-- 153
           +    P       R    G+  +     + P        +  + L     L     MS  
Sbjct: 57  EKGHVP--PEEAERFCRSGIPFADIPEPYRPADIPDIGGVPRSELDAFHFLIMSDEMSRV 114

Query: 154 ----------PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                      S   A  +    T    + W P +F+RE +               LG+T
Sbjct: 115 EGGVGIALAGASAIGAPPIVNCGTEEQKRKWLPGLFTRETN-------------FSLGIT 161

Query: 204 EKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262
           E  GG+D+A I +   K  DG  Y ++G K +++       +  A   GR G   V  L+
Sbjct: 162 EPSGGSDVARIKTTADKTPDGSFYIVNGVKKWITGTPWATHMTTAVRTGRPGMKGVSLLV 221

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLD 319
                 G+ +Q+++N  G  +     +   N    +   L     G +  MK        
Sbjct: 222 IPMDSPGIVHQKIQNS-GQNAGGASFVYLENVKVPVENLLGGENQGFMIIMKNFNKERFL 280

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
             +      R  LA +  YA RR   G  LI+  V++R ++++A  I A  A   +LA  
Sbjct: 281 LTVGCNRKARSCLAMSFQYAMRRETFGKPLIENQVIRRKLSEMAHRIEAHWAWLEQLAYH 340

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRE 436
              +    E+   A  +A + K    ++      EA +  GG+GY++      + +  R+
Sbjct: 341 IKCSDLGWEDPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYMKGGPGATVEQINRD 399

Query: 437 SPANSILLGSGNAMVLDVLNL 457
                +  GS   +    + L
Sbjct: 400 LRMLVVGGGSEEIIADLAVRL 420


>gi|154253125|ref|YP_001413949.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157075|gb|ABS64292.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 389

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 115/347 (33%), Gaps = 29/347 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMV 162
             +R     G        ++             A+      A L     +  ++     V
Sbjct: 40  DFVRDIAAGGWLGVAMPEAYGGSGLGVTEAAIVAQTIAESGACLSGASAIHINLFGPMPV 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    +              N  P+ K       G+TE   G +  AI+++ +   
Sbjct: 100 VVFGTEEQKQK-------------NLPPLIKGEDRCCFGVTEPDAGLNTTAISTKAEWDG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC----FLVPRLLEDGSPNGLCYQRLKNK 278
                     W  ++  ++  ++LA+   +  C      +     +    G    R   K
Sbjct: 147 KAYVVHGRKMWTSTAQTANKILLLARTTPKEKCAKATEGLSLFYTNLDRGGATEVREIEK 206

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G ++  +  + F         L+G+       +        +     +V   R++L +A
Sbjct: 207 MGRKAVDSNAVFFDGLRVPKEDLIGEEGKGFHYLLHGLNPERVLIGAEAVGVGRIALKKA 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YAR R V G  +     ++  +A    ++ AA  + F+ A  +D  ++   EA   + 
Sbjct: 267 TDYAREREVFGRPIGQNQAIQHPLARCWAELEAANLMVFKAAALYDAGENCGAEANAGKY 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +A    +  C+ A       +   GG GY +E  + R+ RE     I
Sbjct: 327 LAAEAGFRACETA-------IMTHGGMGYAKEFHVERYMREVMIARI 366


>gi|304392966|ref|ZP_07374897.1| probable acyl-CoA dehydrogenase fadE25 [Ahrensia sp. R2A130]
 gi|303294964|gb|EFL89333.1| probable acyl-CoA dehydrogenase fadE25 [Ahrensia sp. R2A130]
          Length = 403

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 133/387 (34%), Gaps = 36/387 (9%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ- 145
           + P   RWD+   +  W  +   +   GL      + F          +        A  
Sbjct: 21  FAPLAARWDRERTY-CWSNVKALT-DAGLMGMTIPKRFGGRGASFYDTVVVIEEIAKACT 78

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L A  ++  ++   S +    T    +  A  + + +                 + +TE 
Sbjct: 79  LTARIVVEANMGGISAIMAYGTDEQREFTAQHVLAGD--------------KPAICITEP 124

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVP 259
             G+    +T+  +++  G        W     +S   ++ A+V G       +G F+V 
Sbjct: 125 DAGSAATEMTTTAKRVPSGYVLNGRKHWITGGGVSKLHVIFARVLGDESGEEGIGAFIVL 184

Query: 260 RLLEDG-SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL------GDLNVSTGPVEDM 312
           R  ++G  P+G      +N +G       EL F N F            L      + + 
Sbjct: 185 RDPDNGIEPDGFIIAGRENTMGLCGMPEAELVFDNLFIEERYALRPPSGLKRGFADLMNA 244

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                + +  +++     +   A  Y + R   G  + +   ++  +AD+   + A+  +
Sbjct: 245 YNSQRVGAGTIAMGVAAGATERATKYMKERQQFGRPIAEFQGLQWMLADMDAGVHASRLM 304

Query: 373 SFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
               A S      +  +      +MA   K +  + A  V+ +A++  G  GY +   + 
Sbjct: 305 LQEAARSRGPNGSTFPD-----MMMAARAKAFASQTAIRVVDDALQMFGARGYSDREPLE 359

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R YR+    +I  G+   +   V + L
Sbjct: 360 RMYRDVRMFTIGGGTAQILKTQVASHL 386


>gi|240281937|gb|EER45440.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143]
          Length = 456

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 110/314 (35%), Gaps = 22/314 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +           + PK+              +  +   LG+TE   G
Sbjct: 152 WGLFGGNTIGCPPILNFGNEAQKLKYLPKV-------------SRGEIRFCLGITEPDAG 198

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  ++  +        KW +++ +   +       G  G   +  L+   +  
Sbjct: 199 SDVANIRTTAKRSGNKYIVNGAKKW-ITNGIWAHYCTAEVRTGGKGRGGISLLIIPLAAK 257

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R++N  G  ++ +  +EF +       L+G  N     +        L  A   V
Sbjct: 258 GVTRRRMENS-GVNASGSTFIEFDDVEVPAENLIGIENDGFRYIMSNFNPERLGLASSCV 316

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A +YA  R   G  LI   +++   + +   I    A   +LA +   A  
Sbjct: 317 RLSRVCVEDAYNYAITRETFGQPLIANQIIRAKFSKLGRLIEPCQAFLEQLAYTVQVAAK 376

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
             +EA     M  + K    +    V  EA + +GG+GY        I +  R+     +
Sbjct: 377 TGQEAN-VGGMTALLKVMSTRCLEKVCREAQQVMGGAGYDKSGRGARIEQISRDVRVYVV 435

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    + 
Sbjct: 436 GGGSEEILSDLAVR 449


>gi|312137886|ref|YP_004005222.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311887225|emb|CBH46534.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 380

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 119/360 (33%), Gaps = 29/360 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTS 158
           H     L  +    G         +               L   A+  A    + P++ +
Sbjct: 39  HNHNQDLYLKMADLGWLGITVPEEYGGSAGTA--VDMCILLEQAARGMAPIGGVGPTLIT 96

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            +  A   T    +     I                  +  + ++E   G+D+  ++ + 
Sbjct: 97  GAAYAKFGTDAQKETVLGGIV--------------RGASESISMSEPEAGSDVGNLSCKA 142

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKN 277
           +K+S G        W  ++  ++  +++A+ +        +          GL    +  
Sbjct: 143 EKVSGGWLINGQKTWCSNAHFAENILLVARTDRTGSKHEGLTMFHLPADTPGLKISGIAT 202

Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            +G +     +L  ++       ++G++      +     +  L    M +   + +  +
Sbjct: 203 -MGGKEVN--DLYLTDVLLPEDAVVGEVGQGWTQLMTGLNIERLILGAMMLGTAQRAFDD 259

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ +  +R   G  +     ++  IAD+A +I     L +  A   D+  ++        
Sbjct: 260 ALEFVTQRKQFGRPVGTFQALRHRIADLATEIECTRLLVYNTARLVDDNPTK-----MFP 314

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A + K    + A  V  E M+ +GG GY  E  +  H R++   SI  G+       +
Sbjct: 315 REASMVKLKATETAKKVALEGMQMMGGYGYATEFDMEGHVRKTLVASIYGGTNEIQRDII 374


>gi|300780127|ref|ZP_07089983.1| glutaryl-CoA dehydrogenase [Corynebacterium genitalium ATCC 33030]
 gi|300534237|gb|EFK55296.1| glutaryl-CoA dehydrogenase [Corynebacterium genitalium ATCC 33030]
          Length = 408

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 121/381 (31%), Gaps = 42/381 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L+ R    G+  +       P      + +    +                 + + + 
Sbjct: 52  FELIPRFAEKGMIGAHLSGYGCPGRSAVDYGLAMLEVEAADSGLRTIFSVLGSLAMTSIH 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222
           L  T    + + PK+ + E             +    GLTE   G+D A++T++   K  
Sbjct: 112 LNGTEEQKEKYLPKMAAGE-------------LLGAFGLTEPTAGSDPASMTTRATYKPG 158

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVE------------GRVGCFLVPRLLEDGSPNGL 270
           +G       +W   S  +D  I+ A+V                    +   + +    G 
Sbjct: 159 EGWVLNGEKRWIGLSHYADLTIIWAKVSTADLEAAGLDGFPEGRDETIAGFIVEKDTPGF 218

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
             Q++  K+  R +    +   +    L+G+  + +G        + L+ A   +    +
Sbjct: 219 DPQQIDKKLSMRVSTQAHIYMKDA---LVGEDKILSGRFGLKAPFMCLNEARYGIGWGVL 275

Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             A      A+ YA+ R   G  L    + ++ + D+A+ +     L+  +    D    
Sbjct: 276 GAARDSIECALAYAKERTQFGKPLAGFQLTQKKLVDMAVGLNQGYLLALHIGRQKDAG-- 333

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                        + K    + A  +  EA   +GG+G   + S  RH     +     G
Sbjct: 334 -----TLDISQISVAKLQNTRTAIEIAREARTILGGNGVTHDYSPIRHAANLESVRTYEG 388

Query: 446 SGNAMVLDVLNLLEKGTNLFE 466
           +     L +L     G   F 
Sbjct: 389 TDEMHTL-ILGQKMTGIGAFA 408


>gi|169630715|ref|YP_001704364.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242682|emb|CAM63710.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 420

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 121/439 (27%), Gaps = 50/439 (11%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +     LV  +A     + +E+  L               A+ N  +   +     R D 
Sbjct: 3   FELPPELVDYLAELDGFIDREIVPL-------------EQADDNI-RFFDHRREDSRTDW 48

Query: 97  VE---FHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAA---------RLYLM 143
                 +  W ALL  +         +   F      +    +  A          L L 
Sbjct: 49  ERGGLPNREWEALLGEARRRADVAGHFRYPFPAEFGGRDGSNLGMAVIREHLARRGLGLH 108

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             L+  H +  +     ++    +      W   +                +     G+T
Sbjct: 109 CDLQNEHAIVGNNVGLLLMLEYGSDEQKAAWVEGLAGG-------------TKVFAFGIT 155

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           E   G+D   + ++  K            W     ++DA ++ A+  G  G    +   L
Sbjct: 156 EPEHGSDATYMETRAVKDGPDWVINGEKTWNTGVHVADADLIFARTSGEPGDGRGITAFL 215

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 G   +       N       +  ++       + G      G V+       + 
Sbjct: 216 VPADAPGFKVEEYLWTF-NMPTDHAHVSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIR 274

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S+   +  +  ++ YA+ R   G  L     ++  + ++        AL  + A S
Sbjct: 275 QAASSLGAAQFCIDRSVAYAKERRPFGKALASNQAIQFPLVELQTQCEMLRALIHKTAWS 334

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D     S           +  Y   ++       AM+  GG GY         YR    
Sbjct: 335 MDTYGPFS-----VSEQVSMCNYVANRLCCEAADRAMQVHGGMGYSRHMPFEHIYRHHRR 389

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    +  V   +
Sbjct: 390 YRITEGAEEIQMRRVAGYM 408


>gi|170722328|ref|YP_001750016.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760331|gb|ACA73647.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 387

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 132/368 (35%), Gaps = 25/368 (6%)

Query: 95  DKVEFHPAW--HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           D    HP      + +RS   GL+  +   +        A         L A  EA  L 
Sbjct: 33  DWARPHPQAVLRQVWKRSSEQGLYTLMLPEAMGGAGLSVA--------DLCAVKEATVLT 84

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +    +  L   PRV      K+ S         P+ +   A+   LTE   G+D  
Sbjct: 85  GSMLAPHVLGELSGPPRVGH--LLKVASPYQVEHFLQPVCRAEKAVCFALTEAEAGSDAT 142

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
           AI +Q ++  D  Y LSG K ++S    +D  ++LA      G   +     D   +G+ 
Sbjct: 143 AIRTQARRDGDH-YVLSGSKRYISGATYADLAVLLAVTGPGQGAQGISAFFVDLKASGVR 201

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +     +     A  ++           L+G+             L  L      +   
Sbjct: 202 VESDYAVMSG-GGAHGDIVLDEVRVPAANLIGEEGQGFKLAMGRITLNRLLHCPTLLGMA 260

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            ++L  +I +AR R   G  +     +   IAD+A ++ AA ++ +  A   D   +   
Sbjct: 261 GLALNLSIEHARSRKQFGQPIAMFQAVNHMIADMATELHAARSMVYATAQVNDAGGNIRT 320

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           +       AP+ K +  + A  +  +A++  GG+G ++   +   +R +    IL G+  
Sbjct: 321 Q-------APMCKLFVSEAAFRIADKAVQVHGGAGLMQGHPVEWIFRATRMMRILTGTSE 373

Query: 449 AMVLDVLN 456
                +  
Sbjct: 374 IQRNTIAK 381


>gi|325088078|gb|EGC41388.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 466

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 110/314 (35%), Gaps = 22/314 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +           + PK+              +  +   LG+TE   G
Sbjct: 149 WGLFGGNTIGCPPILNFGNEAQKLKYLPKV-------------SRGEIRFCLGITEPDAG 195

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  ++  +        KW +++ +   +       G  G   +  L+   +  
Sbjct: 196 SDVANIRTTAKRSGNKYIVNGAKKW-ITNGIWAHYCTAEVRTGGKGRGGISLLIIPLAAK 254

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  +R++N  G  ++ +  +EF +       L+G  N     +        L  A   V
Sbjct: 255 GVTRRRMENS-GVNASGSTFIEFDDVEVPAENLIGIENDGFRYIMSNFNPERLGLASSCV 313

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A +YA  R   G  LI   +++   + +   I    A   +LA +   A  
Sbjct: 314 RLSRVCVEDAYNYAITRETFGQPLIANQIIRAKFSKLGRLIEPCQAFLEQLAYTVQVAAK 373

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
             +EA     M  + K    +    V  EA + +GG+GY        I +  R+     +
Sbjct: 374 TGQEAN-VGGMTALLKVMSTRCLEKVCREAQQVMGGAGYDKSGRGARIEQISRDVRVYVV 432

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    + 
Sbjct: 433 GGGSEEILSDLAVR 446


>gi|326382442|ref|ZP_08204133.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198561|gb|EGD55744.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 379

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 125/354 (35%), Gaps = 27/354 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R+    G         F                 +  Q   G +  P++ +A+  A 
Sbjct: 43  ELYRKMAALGWAGINVAEEFGGAGAGNVEMCIFLEEAVRCQAPIGAVG-PTLITAAAYAK 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + ++    + + +              ++ + ++E   G+D+ A+T + +K+  G
Sbjct: 102 FANDDLRREVLAGVVAGD--------------SLSVSMSEPEAGSDVGALTCRAEKVDGG 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   W  ++  S + +++A+ +   G    + +        GL    + + +G R 
Sbjct: 148 WKINGQKTWCSNAHFSKSILLIARTDRSGGKHEGLTQFHVPAGTPGLKISGI-DTLGGRE 206

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               +L F++ F     ++G +      +        L  A M +   R S  + + + +
Sbjct: 207 VN--DLYFTDCFVPDSAVVGTVGDGWRQLMSGLNSERLILAAMQLGLARRSFDDTLAFIK 264

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     ++  +AD A +IA    L + +A + D    +          A + 
Sbjct: 265 DRKQFGRPIGSFQALRHRMADHATEIACTRELVYSVARAADAHPEK-----MMPREASMV 319

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           K    + +  +  + M+ +GG GY  E    R  R +  +++  G+       +
Sbjct: 320 KLKATETSKKMTIDGMQMMGGYGYATEFDAERLMRSAIISTVFGGTNEIQRDII 373


>gi|320450888|ref|YP_004202984.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
 gi|320151057|gb|ADW22435.1| glutaryl-CoA dehydrogenase [Thermus scotoductus SA-01]
          Length = 399

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/434 (17%), Positives = 143/434 (32%), Gaps = 50/434 (11%)

Query: 29  PLFIGMN-AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87
           P  + +N       L    + +  +   KE++      L   A           P +  +
Sbjct: 2   PPLLPVNCPSRCPMLDFYALEDLLTPEEKEIQKAARRFLEKEAL----------PYIRDW 51

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQL 146
                 W++  F      L+ R    G         +    V   A+ + A  L  +   
Sbjct: 52  ------WEEGVFP---THLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLIAYELERVDSG 102

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   S      +    +    +++ PK+   E                  GLTE  
Sbjct: 103 LRSFVSVQSSLVMYPIYAFGSEEQKREFLPKLARGEM-------------VGCFGLTEPD 149

Query: 207 GGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED 264
           GG+D    + ++ +   D         W  +  ++   I+ A+ E GRV  F+VP     
Sbjct: 150 GGSDPYGNMKTKARLEGDTWVLNGTKMWITNGNLAHIAIIWAKDEEGRVLGFIVPT---- 205

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAI 322
               G   + +K+K+  R++ T EL            L  + G    +  L       A 
Sbjct: 206 -DTPGFQAREVKHKMSLRASVTSELVLEEVRVPEALRLPKAEGLKAPLSCLTQARFGIAW 264

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  +     EA+ +A+ R   G  +  + +++  +A++  D      L++RLA   DE
Sbjct: 265 GVLGALEAVYTEAVEFAKSRSTFGEPIAKKQLVQAKLAEMLADHTEGLLLAWRLARLKDE 324

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K +  + + A+        W    A      A + +GGSG   E    RH         
Sbjct: 325 GKLKPAQVSLAKRQ----NVW---KALKAARLARDILGGSGITLEYHAIRHMLNLETVYT 377

Query: 443 LLGSGNAMVLDVLN 456
             G+ +   L +  
Sbjct: 378 YEGTHDIHTLVLGR 391


>gi|313902625|ref|ZP_07836024.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467063|gb|EFR62578.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 386

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 35/370 (9%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHL 151
           RW +    P    L+ R    GL  +    ++        A+ +    L  +        
Sbjct: 38  RWWEEGTFP--RHLIPRFGELGLLGATLPEAYGGAGASSIAYGLIMYELERIDSGLRSFA 95

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              S      +    +    +++ PK+   E             +    GLTE  GG+D 
Sbjct: 96  SVQSSLVMYPIYRYGSEEQRREYLPKLARGE-------------LIGCFGLTEPDGGSDP 142

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ ++ +K            W  +  ++   ++ A+ +  V    +   +      G  
Sbjct: 143 GSMKTRARKDGSSYVITGRKMWITNGNLAHIAVVWAKDDEGV----IRGFIVPTDTPGFR 198

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            + + +K+  R++ T EL            L  + G       L  L  A   ++     
Sbjct: 199 AREIPHKMSLRASVTSELILDEVRVDAAQMLPEARGLGAA---LSCLTQARYGITWGAAG 255

Query: 332 -----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  EA+ +AR R   G  + ++ +++  + ++      A  +S+RL    DE K  
Sbjct: 256 AIDAVFHEALEFARHRVTFGRPIAERQLVQAKLVEMVQAHTQALLMSWRLGKLKDEDK-- 313

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                       + K    + A      A E +GGSG   E +  RH           G+
Sbjct: 314 -----LTYAQVSLAKRSNVRAALQAARSAREILGGSGITLEYAAIRHMLNLETVDTYEGT 368

Query: 447 GNAMVLDVLN 456
            +   L V  
Sbjct: 369 YDIHTLIVGR 378


>gi|226289910|gb|EEH45394.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 435

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 34/394 (8%)

Query: 81  TPQ-LHAYGPGGERWDKVEFHPAWHALLR-RSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            P+ L  +   G         P     +   S+  G+    WD     +V  +  ++  A
Sbjct: 59  PPEALRLHAEKGFTI----IRPTKREYMGGVSMPAGIEPEEWDEFHSLIVVDELSRLGYA 114

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +          L   +      +    +     ++ PK+              +  +  
Sbjct: 115 GV-------IWGLFGGNGIGCPPIMNFGSEAQRLEYMPKV-------------SRGEIRF 154

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
            LG+TE   G+D+A I +  ++  +        KW +++ +   +   A   G  G   +
Sbjct: 155 CLGITEPDAGSDVANIKTTAKRSGNKYIVNGAKKW-ITNGLWADYCTAAVRTGGPGRKGI 213

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             L+   +  G+  +R++N  G  ++ +  +EF +       L+G  N     +      
Sbjct: 214 SLLIVPLAAKGVTRRRMENS-GVNASGSTFIEFDDVEVPVENLIGTENHGFTYIMSNFNP 272

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L  A   +   RV   +A +YA  R   G  LI   +++   +     I    A   +
Sbjct: 273 ERLSMAAACIRLSRVCAEDAYNYAITRETFGQPLIANQIIRAKFSKFGELIEPCQAYLEQ 332

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IAR 432
           L  +   A     +      M  + K    +    V  EA + +GG+GY +      I +
Sbjct: 333 LTYTLHVAAKTGRQDVDVGGMTALLKVMTTRCLEKVCREAQQVMGGAGYNKSGKGARIEQ 392

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
             R+     +  GS   +    +    K  +  +
Sbjct: 393 ISRDVRVFVVGGGSQEILSDLAVRQEMKNLDGLQ 426


>gi|255319960|ref|ZP_05361160.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SK82]
 gi|262379644|ref|ZP_06072800.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255302980|gb|EET82197.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SK82]
 gi|262299101|gb|EEY87014.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 385

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 134/396 (33%), Gaps = 32/396 (8%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           ++   + LA  A           PG    D+         L+++    G         F 
Sbjct: 7   ITEELEFLAETAEKFA--QKYIAPGFLERDQSRIFD--RDLVKKMGEMGFIAPELPEQFG 62

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
                +            A L   ++   +  +  ++A    P V + W  K+ + E   
Sbjct: 63  GQGMGRLAAGIIHEAIAKADLSFSYINLLASLNGQILAEHGQPEVVEPWLKKLTAGE--- 119

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI 244
                         + LTE RGG+D A +  + ++  D  Y ++G K  +S +  +DA +
Sbjct: 120 ----------AIFSIALTEPRGGSDAANLRLKIERDGDE-YIINGEKTSISVADQADASV 168

Query: 245 MLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LG 300
           +  +          V  LL   +  G+   R  +  G R+     + F N    +   LG
Sbjct: 169 VFGRTGANEDSAHGVTALLVPMNLPGISTTRF-DCHGQRAIGRGSIFFDNVRVPINHRLG 227

Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           D N     V            +  ++  RVSL EA  YA +R   G  L     +   +A
Sbjct: 228 DENKGFVQVMQGFDFSRALIGLQVLAVARVSLDEAWEYAAQREAFGQPLTAFQGVSHPLA 287

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           +    + AA  L  +     D     + EA          K+W  K+A  VI + +   G
Sbjct: 288 EYETQVEAARLLCLQTLWLKDNHLPHTSEAGM-------CKWWGPKLAYDVIHQCLLTFG 340

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +GY     + +  R+     I  G+   M   +  
Sbjct: 341 HAGYDRG-VMEQRMRDVLGFQIGDGTAQIMKTIIAR 375


>gi|324997692|ref|ZP_08118804.1| glutaryl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 394

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 128/382 (33%), Gaps = 42/382 (10%)

Query: 102 AWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           A    +RR   D L  H + W  + E  VR+ A  +    L ++     GH  + +  +A
Sbjct: 23  AIRDTVRRFCDDRLRPHVAGWFETGELPVRELA--VELGELGVLGMHLEGHGCAGTSATA 80

Query: 160 SMVALMTTPRV-------------HKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEK 205
              A      V                +A   F S E+       M         GLTE 
Sbjct: 81  YGAACHELEAVDSGIRSLVSVQGSLAMYAIHAFGSEEHRQEWLPAMAAGRAIGCFGLTEP 140

Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
             G+D + + ++ ++  +G            W  +  ++D  ++ A+ +  +  F+VP  
Sbjct: 141 DFGSDPSGMRTRARRDGNGPDADWVLDGTKMWITNGSVADVAVVWARTDDGIRGFVVPA- 199

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
                  G   + +  K+  R++ T EL            L   TG       L  L  A
Sbjct: 200 ----GTPGFTARAVPGKLSLRASVTSELVLDAVRLPAAAVLPGVTGLR---GPLSCLSEA 252

Query: 322 IMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
              +        R  L  AI YA  R V    L    + +  +AD+A+++  A  L+  L
Sbjct: 253 RFGIVFGAPGAARDCLESAIGYALARPVFDRPLAGFQLTQAKLADMAVELDKAMLLALHL 312

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D      E+         I K    + +  +   +   +G +G   E  + RH   
Sbjct: 313 GRLKDAGTITPEQ-------ISIGKLNNVRESLEIARTSRTILGANGITLEYPVLRHAAN 365

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
             +     G+     L V   L
Sbjct: 366 LESVLTYEGTSEVHQLTVGKAL 387


>gi|120402855|ref|YP_952684.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955673|gb|ABM12678.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 401

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 115/361 (31%), Gaps = 31/361 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L RR    G+     +          ++ +    L          +      S   + 
Sbjct: 58  RELGRRFGELGVLGMHLEGYGCAGTNAVSYGLACLELEAGDSGFRSFVSVQGSLSMYSIY 117

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +     +W P++ S E                  GLTE   G++ A + ++ ++   
Sbjct: 118 RYGSDEQKNEWLPQLASGE-------------AIGCFGLTEPDFGSNPAGMRTRARRSGA 164

Query: 224 G----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G            W  +  ++D   + AQ +  +  FLVP         G     +  K+
Sbjct: 165 GENADWVLNGTKMWITNGNLADVATVWAQTDEGIRGFLVPT-----DTPGFTANAIHRKL 219

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIH 337
             R++ T EL   N        L  + G    +  L          ++   R SL   I 
Sbjct: 220 SLRASVTSELVLDNVRLPASAQLPDAVGLSAPLSCLNEARFGIVFGALGAARDSLETTIA 279

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R V    L    + +  +A++ +++     L+  L    D    R E+        
Sbjct: 280 YTQTRDVFDKPLAGYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQ-------I 332

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            + K    + A A+  E    +GGSG   E S  RH     +     G+    +L +   
Sbjct: 333 SLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKA 392

Query: 458 L 458
           L
Sbjct: 393 L 393


>gi|241766278|ref|ZP_04764172.1| cyclohexanecarboxyl-CoA dehydrogenase [Acidovorax delafieldii 2AN]
 gi|241363620|gb|EER59029.1| cyclohexanecarboxyl-CoA dehydrogenase [Acidovorax delafieldii 2AN]
          Length = 385

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 135/412 (32%), Gaps = 44/412 (10%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
             + ++L+ L     + TA+  A       P            D+V        LLR   
Sbjct: 5   PYIDEDLQAL-----ADTARRFAE--ERVKPGFLERDKT-RDLDRV--------LLREMG 48

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G  C      +  +                A L   +L   +  +  +++    P V 
Sbjct: 49  ELGFICPELPEQYGGLGLGCLAAGVIHEEIARADLSFSYLNLLASLNGQILSKYGKPEVV 108

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             W  K+   E                 + LTE RGG+D A +  + ++  D  Y ++G 
Sbjct: 109 GPWLHKLTRGE-------------AICCIALTEPRGGSDAANLRLRIERDGD-FYVINGE 154

Query: 232 KWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K  +S+   +D  ++  +  +   G   V  ++      G+   R  +  G R+     +
Sbjct: 155 KTSISAADQADIAVVFGRTGQPEDGAHGVTAVMVPMDSPGITTSRF-DCHGQRAIGRGSI 213

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N    +   LGD N     V            +  ++  RV+L E   Y  +R   G
Sbjct: 214 FFENVRVPVTHRLGDENKGFVQVMHGFDFSRSLIGLQCLAVARVALEETWEYITQRQAFG 273

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             L     +   +A    ++  A  L  +     D+    + EA  A+        W  K
Sbjct: 274 QPLSAFQGVTHPLAQYDTEVEGARLLCLQGLWLKDKGLPHTAEAGMAKW-------WGPK 326

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  VI + + C G  GY     + +  R+     I  G+   M   +    
Sbjct: 327 LSYDVIHQCLLCFGHGGYDRG-LMEQRLRDVLGFQIGDGTAQIMKTIIARAR 377


>gi|121610548|ref|YP_998355.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555188|gb|ABM59337.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 397

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 130/399 (32%), Gaps = 34/399 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +P WH +       G         +          + A   +      +
Sbjct: 25  PRAAEVDRTEAYP-WHTVQAL-RGHGFMGMTMPVEYGGKGASYLDAVIAIEEFAKVCAAS 82

Query: 149 GHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +M  S   A   +    +    +  A  +   +                 + +TE   
Sbjct: 83  GRIMVESNMGAIGAIMKYGSDAQKRLAAALVLDGD--------------KPAICITEPEA 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-S 266
           G+    + +   +  D         W   + +S    + A+V        +   +  G  
Sbjct: 129 GSAATDMRTTATRRGDSYILDGAKHWITGAGVSRLHFVFARVIEDGVDRGIGGFIVVGPD 188

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL------LGDLNVSTGPVEDMKILIYLDS 320
             G+  +RL   +G R      + F              G +      + +      + +
Sbjct: 189 VPGMSIRRLFA-MGIRGVPEGHIGFDRVEVPAAMRVCPPGGVERGFAGLMNAYNAQRVGA 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A + +   + +   A+ YA+ R   G  + +   ++  +AD+++ + AA AL +R A S 
Sbjct: 248 ATVGLGIAQGAFELAVAYAKERQQFGRPIGEFQGVQWMLADMSVQLEAARALIYRAATSG 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE       A      A          A AV  +A++  G +GY  +R + R  R++   
Sbjct: 308 DEFPDMQAAAQAKVFAA--------DTAIAVTNDALQIHGSAGYGRDRPLERMVRDARMF 359

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           +I  G+   +   V + +  G  L +     + Q  G  
Sbjct: 360 TISGGTAQVLRTQVASRIL-GEKLPQTRDGYVRQPFGQR 397


>gi|62511251|gb|AAX84220.1| acyl-CoA dehydrogenase [Bacillus thuringiensis]
          Length = 397

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PYANSWEIEQGIPS--DIIKTCAKNGYLGGTLPAEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPV----ACLVPKDSA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   I D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|148657081|ref|YP_001277286.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569191|gb|ABQ91336.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 364

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 132/359 (36%), Gaps = 38/359 (10%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-----------IRAARLYLMAQLEA 148
             A+ A  +R+I   +    WD    P    + +            + AA       L  
Sbjct: 27  PAAYEADEKRAIPSDIIARGWDLGLLPSAIPEQYGGFGETHQALTGVLAAEELGYGDLSM 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +      A  +    T    + W P+     + P                L E R  
Sbjct: 87  ALYLMTPNLFAIPILHFGTEEQKERWLPRTVEGGFAP------------YTAALIEPRWS 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            D  A+ +  ++  + +Y ++GHK  +  +  + AF++ A+       F++ R       
Sbjct: 135 FDPHALHTVAEREGN-VYEITGHKALVPLAADAQAFLVYARENDTTQAFIIER-----GT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKILIYLDSAIMSVS 326
            GL     ++ +G R+  T EL   +        L    G  +E +     +  A ++V 
Sbjct: 189 EGLAVLERESFMGIRALPTYELRLDDVHVPASCRLGGEQGIDIEALMNYSRVALAALAVG 248

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +   A  YA++R   G  +     +   +A++A++I AA  +++  A   D+  + 
Sbjct: 249 VARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEIEAARLMTYEAAWHLDKGHN- 307

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                 A   A + K +  +MA  V   A++ +GG GYI E  + R  R     S  LG
Sbjct: 308 ------ATQSASLAKAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFLG 360


>gi|171463700|ref|YP_001797813.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193238|gb|ACB44199.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 347

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 107/303 (35%), Gaps = 32/303 (10%)

Query: 98  EFHPAWH------ALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGH 150
             H A+       A+ R     GL        +        ++ + A ++  +       
Sbjct: 17  RIHDAYRNETTDPAIFREMGELGLLGITTPEQYGGANLNYVSYGLIARKIERVDSGYRSM 76

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    +    + + PK+ S E+                 GLTE   G+D
Sbjct: 77  MSVQSSLVMVPINEFGSEAQKQKYLPKLASGEW-------------IGYFGLTEPNHGSD 123

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ +++           W  +SP++D F++ A+ +      ++   + +    GL
Sbjct: 124 AGGMITRAKQVPGSFSLTGSKMWISNSPIADVFVVWAKND----AGIIRGYILEKGMKGL 179

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
              ++  K+  R++ T E+     F     +   + G          L+SA   ++   +
Sbjct: 180 SAPKISGKMSLRASITGEIVMDEVFVPAENEFPKTEGLK---GPFTCLNSARYGIAWGAL 236

Query: 331 SLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
             AE   YA R     R   G +L    ++++ +AD+  +IA       RL    DE  +
Sbjct: 237 GAAEWCWYATRQYTMDRKQFGKLLAANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGIA 296

Query: 386 RSE 388
             E
Sbjct: 297 APE 299


>gi|119718648|ref|YP_925613.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539309|gb|ABL83926.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 621

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/422 (17%), Positives = 159/422 (37%), Gaps = 58/422 (13%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR-------EYDPTN 187
               RL   A+L      S    +   + L   P +    A  +F+        E D   
Sbjct: 90  AEYWRLTTFAELGGTPAPSSICWAMGELVLGANPAIWMYGAGPMFAGVLWRNGNERDRQI 149

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS--PMSD--AF 243
              +        + LTE   G+D+ A  ++     DG + + G K F++S   +SD    
Sbjct: 150 AQLIVDNGWNTTMVLTEPDAGSDVGAGRTKATPNDDGTWNIEGVKRFITSAEGVSDQVIH 209

Query: 244 IMLAQV----------EGRVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATV 287
           ++LA+              +  F+VP+   D      G  NG     +++K+G + + T 
Sbjct: 210 MVLARPVGVEGAGGPGTKGLSLFIVPKYHFDLETGELGERNGAYVTNVEHKMGIKVSNTC 269

Query: 288 ELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           EL F +          G+LLG+++     +  +     +     +++ +      A+ +A
Sbjct: 270 ELTFGDPGVGGGEPAVGYLLGEVHNGIAQMFQVIENARMMVGTKAIATLSTGYLNALEFA 329

Query: 340 RRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AK 384
           + R                  +   P ++R++        A  AL    A+  D    A+
Sbjct: 330 KERVQGADLAQSADKTAPRVTITHHPDVRRSLMTQKSFAEAMRALVLYTASWQDRVMIAE 389

Query: 385 SRSEEAAYARI----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPA 439
              E    A      + PI K +  + +  ++  E+++ +GGSG+++E  I ++ R++  
Sbjct: 390 HNGERDELAEKVNDLLLPIVKGYGSERSWVLLGTESLQTLGGSGFLQEYPIEQYVRDAKI 449

Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496
           +++  G+      D     +++        L   +++ + S +G   +   R+ ++    
Sbjct: 450 DTLYEGTTAIQGQDFFFRKIVKDQGKALGHLAGEIQKFIDSEAGNGRLKNERELLATALA 509

Query: 497 DK 498
           D 
Sbjct: 510 DA 511


>gi|163838941|ref|YP_001623346.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162952417|gb|ABY21932.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 398

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 67/413 (16%), Positives = 136/413 (32%), Gaps = 33/413 (7%)

Query: 51  PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS 110
           P+  + +     E +      EL R+  + T ++         WDK EF      ++ + 
Sbjct: 7   PANTNPDYFGFEELLTDEERSELVRIREFLTKEIKPLTQDA--WDKTEFP---FEVIEKF 61

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVALMTTP 168
               L    +        +++A       + L  M    A      +  +   +      
Sbjct: 62  AELNLADDQFPGFASAGKQRRALMTGFLSIELNRMDPSLAVFSGVHTGLAMGSIFGGGDE 121

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYC 227
              + W P + +                     LTE  GG+D+   + +  ++  D    
Sbjct: 122 EQRQRWLPDMIAW-------------KKIGAFALTEPEGGSDVSGGMRTTARREGDTWII 168

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
               +W  +   +D  I+ A+ E           + +    G    +++ KI   +    
Sbjct: 169 NGAKRWIGNGTFADLAIVWARDEADNQVKG---FVVEKDMPGFSSAKIEGKIALCTVQNA 225

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +L F N        L       +  ++L       A  ++     +   A  YA  R   
Sbjct: 226 DLSFDNVRVPEANRLQNINSFRDTAEVLRATRGGVAWQALGVSIRAYELARDYATTRVQF 285

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +    +++  +  +  +I+A   +  RLA   +E +   E+AA A       K +C 
Sbjct: 286 GKPIASFQMIQDLLVKMLGNISAMFGMVTRLAQLSEELRDTPEQAALA-------KAFCT 338

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 +A   +  GG+G + +  IA+ + ++ A     GS     L V   +
Sbjct: 339 SKMRETVAYGRDLFGGNGIVLDYEIAKLFSDAEAIYSFEGSREMNTLIVGKNI 391


>gi|154318532|ref|XP_001558584.1| acyl-CoA dehydrogenase family protein [Botryotinia fuckeliana
           B05.10]
 gi|150857785|gb|EDN32977.1| acyl-CoA dehydrogenase family protein [Botryotinia fuckeliana
           B05.10]
          Length = 437

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 122/365 (33%), Gaps = 29/365 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLE 147
             +R +  E+    H L R   + G                  +A  +          + 
Sbjct: 67  WAKRDETGEYP---HDLHRDLANGGWIGIALPEELGGSGLGISEATMLLQTVSESGGGMA 123

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   +  +V +   VA   T    +   PK+    +                 G+TE   
Sbjct: 124 AAQSIHANVYATQPVAKFATASQRQRMLPKLIDGTWR-------------ACFGVTEPNT 170

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G D   + ++ ++  D         W  S+ ++   ++LA+       +     +     
Sbjct: 171 GLDTLKLRTRARREGDTYKISGQKIWISSAQVATKMVLLARTTPLEEVKKPSEGLSLFFI 230

Query: 264 DGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D  P   GL  +++K K+G R+    E+ F N       L+G        V         
Sbjct: 231 DFDPKQPGLELKKIK-KMGGRAIDANEVFFDNYIVNSDSLIGKEGQGFKIVLHGMNAERC 289

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L  A  YA+ R V G  +     ++  +AD  + + AA   ++  A 
Sbjct: 290 LLAGEALGLGYAALYRASQYAKERIVFGRPIGMNQGIQHPLADAYMHLEAAKLATYHAAR 349

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D + +  +       +     KY   + A      ++  +GG GY +E  + R+ RE 
Sbjct: 350 LYDSSTTDETITQTAVGVACNSAKYLAAEAAFTACERSVLSLGGMGYAQEYHVERYLREC 409

Query: 438 PANSI 442
               I
Sbjct: 410 LVPRI 414


>gi|111022111|ref|YP_705083.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821641|gb|ABG96925.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 411

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 111/316 (35%), Gaps = 35/316 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITS 216
           +A  +    T    + W P + +                     +TE   G+D    + S
Sbjct: 113 AAGTIRSRGTLAQKERWLPGLVT-------------FEKVGAWAITEPDSGSDAFGGMKS 159

Query: 217 QGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGL 270
             ++  D  Y L+G K F+++   +D  I+ A+++            V   + D    GL
Sbjct: 160 YVRRDGDD-YILNGQKTFITNGPYADVIIVYAKLDEGDSSVDRRDRKVLAFVLDAGMEGL 218

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAI 322
                  K+G  S+ T EL F N              G  +      ++      +  A 
Sbjct: 219 TQGAPFKKMGMNSSPTGELFFDNVRLTRDRLLGETEDGGKSDGKSSAKESFAAERIGIAS 278

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +S+  +       I YA+ R + G  +    +++  +A++ +       + F        
Sbjct: 279 LSLGIINECHRLCIDYAKSRKLWGKEIAQFQLIQLKLAEMEIARINVQNMVFNAIERTAA 338

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 339 GDQVSLAEASAMKL------YSSRAATEVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 392

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 393 YAGSNEIQVTHIAKGL 408


>gi|215411124|ref|ZP_03419932.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis
           94_M4241A]
          Length = 445

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/423 (17%), Positives = 144/423 (34%), Gaps = 63/423 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+     A+ N P    + P       +         ++     G   
Sbjct: 42  LAEAARLAEGPIAESFGY-ADRNPPV---FDPNTH---SISVPDELAKTVQAIKEAGWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +            +   A   A       V  A  + +       + WA +
Sbjct: 95  LGLAEEIGGMPAPPPLAWAVNEMIYCANPSACFFNLGPVL-AQSLYIEGNDEQ-RRWAAE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +  T             + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 153 GVQRGWQAT-------------MVLTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISG 199

Query: 238 PM------SDAFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                   +   ++LA+ EG       +  F VP  L D      G+ NG+    L++K+
Sbjct: 200 GDVGNTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKM 259

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+G ++     +  +     +   + S   +      A
Sbjct: 260 GLKSSPTCELTFGGADVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  ++  P ++R++           AL    A   D+A
Sbjct: 320 LAFAKERVQGADLTQMTDKTAPRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + PI K    + A  ++ E+++ +GGSG++ +  + ++ R+
Sbjct: 380 VAQRVSGADHDMAHRVDDLLLPIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRD 439

Query: 437 SPA 439
           +  
Sbjct: 440 AKI 442


>gi|260903973|ref|ZP_05912295.1| acyl-CoA dehydrogenase domain protein [Brevibacterium linens BL2]
          Length = 398

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 122/363 (33%), Gaps = 40/363 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++R     GL          P      + + A  L          +      + S +  
Sbjct: 60  EIVREMGDLGLLGMHLHGYGCPGRSAVEYGLAAMELEAGDSGLRTFVSVQGSLAMSAIHK 119

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +      + P              M K  +    GLTE   G+D  ++ +   +  DG
Sbjct: 120 FGSEEQKNRYLPG-------------MAKGEIIGCFGLTEPTAGSDPGSMATTATRNDDG 166

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
            + L+G K ++  + ++D  ++ A  +  +  FLVP         G     ++ K+  R+
Sbjct: 167 SWTLNGAKRWIGLASIADIAVIWAATDEGIRGFLVPT-----DTAGFTATPIEQKLSMRA 221

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
           +   +++  +       +L ++    GP         L+ A   +    +  A      A
Sbjct: 222 SIQCDIDIVDVQLPAEAVLPEVRGLKGP------FSCLNEARYGIMWGAMGAARDSYEVA 275

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R      L    + ++ + ++ L+I     ++ +     D       +      
Sbjct: 276 LKYAQERMQFDKPLSGYQITQQKLVNMVLEIQKGILVALQTGRLKDAGTLDPVQ------ 329

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K   C+ A A+  EA   +GG+G   E S  RH     +     G+     L + 
Sbjct: 330 -ISVGKLNNCREAIAICREARTMLGGNGITLEYSPLRHANNLESVRTYEGTDEVHTLILG 388

Query: 456 NLL 458
             +
Sbjct: 389 RHI 391


>gi|271967044|ref|YP_003341240.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270510219|gb|ACZ88497.1| glutaryl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 387

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 130/392 (33%), Gaps = 32/392 (8%)

Query: 71  QELARMA--NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           +   R A  +Y   +L  +  G   W +    P  HA+ +     G+     +       
Sbjct: 17  ERAIRDAVRDYCRAELLPHVAG---WFEAGTIPDPHAVAKGLGALGVFGMHLEGYGCAGT 73

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              ++ +    L  +       +      + + +    +     +W P++ + E      
Sbjct: 74  NAVSYGLACRELEAVDSGLRSLVSVQGSLAMTAIHRFGSEEQKLEWLPRMAAGE------ 127

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                       GLTE   G+D  ++ ++ ++            W  +  ++D  ++ AQ
Sbjct: 128 -------ALGCFGLTEPDSGSDPGSMRTRARRDGTDWVLDGTKMWITNGAVADVAVVWAQ 180

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  +  FLVPR        GL    +  K+  R++ T EL            L ++ G 
Sbjct: 181 TEEGIRGFLVPR-----GTPGLSAGVVHGKLSLRASITSELVLDGVRLPHEAALPLAEGI 235

Query: 309 VEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
              +  L          +    R     A+ YA+ R   G  +    + +  IAD+ +D+
Sbjct: 236 KAPLTCLSEARFGIVWGAAGAARDCFEAALDYAQTRTQFGRPIAAFQLTQGKIADMLVDV 295

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
             A+  + R+    DE ++               K    + A  V A A    G SG   
Sbjct: 296 NQASLTALRIGRLKDEGRAHP-------SHVSFGKLANVRAAQRVAATARSVHGASGITL 348

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           E  + RH     + +   G+     L +   +
Sbjct: 349 EYPVMRHMVNMESVATYEGTAEIHALTLGRAV 380


>gi|228909054|ref|ZP_04072883.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228850562|gb|EEM95387.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 397

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PHANSWEVEQGIPS--DIIKTCAKNGYLGGTLPAEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPV----ACLVPKDSA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   I D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|331694429|ref|YP_004330668.1| glutaryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326949118|gb|AEA22815.1| Glutaryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 396

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/412 (16%), Positives = 136/412 (33%), Gaps = 37/412 (8%)

Query: 56  KELELLGEYVLSC--------TAQELARMANYNTPQLHAYGPG-GERWDKVEFHPAWHAL 106
            E   LGE + +         TA++  R A   T       PG G+ W++ E       L
Sbjct: 2   AEYAHLGEALGTDFFSVREQFTAEQWDRFATTRTFVDTEVLPGVGDLWERAELP---WKL 58

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           +RR     +            +   A  +    L+         L   +  +   +A+  
Sbjct: 59  IRRLPELRIVGEDIQGYGAAGMSPTACGLVHMELHRGDGSLGTFLGVHAGLAMQAIAMCG 118

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +    + W P              M          LTE   G+D  A+ +  ++  D   
Sbjct: 119 SAEQRERWLPS-------------MSTMDRIGAFALTEPDHGSDSVALETSARRDGDHWV 165

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                +W  ++ ++D  ++ A+             + +    G     +  K+  RS   
Sbjct: 166 LDGRKRWIGNATIADVVVVWARDTDSGEVQG---FVVETPTEGFAATAITGKLSLRSIQQ 222

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
            ++  +         L  +    +  ++L       A M++         A+ YA  R  
Sbjct: 223 ADITLTGVRVPDENRLVEARTFADCARVLANTRGICAWMALGHATAGYDAALRYAMERTQ 282

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  L    ++++ +  +  D+        ++    D  +        +  +A + K   
Sbjct: 283 FGKPLASFQIVQQRLVHMLADLTGMQLYCMQIGRLADAGR-------LSPTVAGLAKMNN 335

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            + A  +++EA + +GG+G + E  +ARH+ +  A     G+     L V  
Sbjct: 336 TRAARRILSEARDLLGGNGILLEHHVARHWADIEAVHTFEGTETIQTLIVGR 387


>gi|317494106|ref|ZP_07952522.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917879|gb|EFV39222.1| acyl-CoA dehydrogenase domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 380

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 129/365 (35%), Gaps = 18/365 (4%)

Query: 101 PAWHALLRRS--IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            A+ A   R+    +     + D   + ++  + H    A    +A +            
Sbjct: 26  EAYFAECDRNSQYPERFVKELADMGIDSLLLPEEHGGLDAGFVTLAAV----WAELGRLG 81

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
           A    L   P        +  ++E      A            +TE   G+D+ ++ +  
Sbjct: 82  APTYVLYQLPGGFNTVL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSMQTSY 140

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
            + +  +Y      +  SS  +   +++A+        +      D S  G+   +L+ K
Sbjct: 141 TRKNGKVYLNGSKCFITSSAYTPYIVVMARDAASPDKPVFSEWFVDMSKPGVKVNKLE-K 199

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R ++  E+ F N       + G        V++         A+ +      +  +A
Sbjct: 200 LGLRMDSCCEILFDNVELEEKDMFGREGNGFNRVKEEFDHERFIVALTNYGTAFCAFEDA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA +R   G  +    +++   A +A+ + +   + F  A   D     S +AA    
Sbjct: 260 ARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLFEAAWKSDNGLMTSGDAAM--- 316

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                KY+C   A  V+  AM+ +GG G   +  I R +R+   + +  GS    +L + 
Sbjct: 317 ----CKYFCANAAFEVVDSAMQVLGGVGIAGDHRITRFWRDLRVDRVSGGSDEMQILTLG 372

Query: 456 NLLEK 460
             + K
Sbjct: 373 RAVLK 377


>gi|223940947|emb|CAQ43082.1| hypothetical protein [Chondromyces crocatus]
          Length = 377

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 127/387 (32%), Gaps = 36/387 (9%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           S T Q  A  A      L    P    WD+ E  P+  A ++     G   ++  R    
Sbjct: 6   SQTTQREAFDAFIKEHVL----PHAGTWDREERMPS--AAIQALAATGYLGALVPREMGG 59

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                                   L++        +    T    + W P          
Sbjct: 60  AGFDALTFGLLNETLGRGCSSLRSLLTVHTMVIHAIDRWGTRTTRERWLPAF-------- 111

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                 + +     GLTE + G+D  AI +  ++  D +      +W     ++D  ++ 
Sbjct: 112 -----ARGASLGAFGLTEPQAGSDPGAIETTAEERGDTLILNGRKRWITFGEIADVLLIF 166

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
           A+ +G         +L +    G+    ++  +G R++   E++  N        L    
Sbjct: 167 ARCQGAPC-----AVLVEADRPGVSRTPIRGMLGTRASMLAEIDLVNCEVPRENLLAR-H 220

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361
           G          LD    SV+   V +A A       Y   R   G  L D  +++  + +
Sbjct: 221 GFGLSHVAQSALDWGRYSVAWGSVGIAHAALEASARYTEERVQFGTKLRDHQLIRAMLTE 280

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + +   AA  L +      D+          A +   I KY+  + A     +A++  G 
Sbjct: 281 MHVQTKAAALLCWNAGRLKDQRHPS------AILETSIAKYFAARAAMRAATDAVQIHGA 334

Query: 422 SGYIEERSIARHYRESPANSILLGSGN 448
           SG   ++ + R  R++    I+ GS  
Sbjct: 335 SGCSADQPVERLLRDAKIMEIIEGSNQ 361


>gi|240170436|ref|ZP_04749095.1| acyl-CoA dehydrogenase FadE12_1 [Mycobacterium kansasii ATCC 12478]
          Length = 392

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 120/361 (33%), Gaps = 36/361 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLM 152
           D+    P      +     G         +                       + A   +
Sbjct: 32  DQAHEFPT--EFYQAIAQGGWLGMTIPVEYGGHGLGITEATILLEEVAKSGGGMNAASSI 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     V +  +  +     P++ + E               +  G+TE   G D +
Sbjct: 90  HLSIFGMQPVVVHGSAELKARTLPRVATGEVH-------------VCFGVTEPGAGLDTS 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--------GRVGCFLVPRLLED 264
            IT+  ++  D  +      W   +  SD  ++L + E        G      +   L D
Sbjct: 137 RITTFAKRDGDRYFVNGRKVWISKAMESDKILLLTRTESLDDVERRGAKKTDGMTLFLTD 196

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
              + +  + +  K+G  + ++ EL   N    +   +G+       + D      +  A
Sbjct: 197 LDRSRVDVRPI-RKMGRNAVSSNELFIDNLEVPVENRIGEEGKGFQYILDGLNPERMLIA 255

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R +L +A+ YA  R V G  +     ++  +AD    + AA  +  +    +D
Sbjct: 256 AEALGIGRAALDKAVKYATDREVFGRPIGMNQGIQFPLADSLAHLDAAELMLRKATWLYD 315

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K    EA  A+ +       C          A++  GG GY EE  +AR++RE+    
Sbjct: 316 NGKPCGREANTAKYL-------CADAGFTAADRALQTHGGMGYAEEYHVARYFREARLMK 368

Query: 442 I 442
           I
Sbjct: 369 I 369


>gi|163790011|ref|ZP_02184446.1| Acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
 gi|159874711|gb|EDP68780.1| Acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
          Length = 373

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 125/372 (33%), Gaps = 29/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    +DK E  P     L +    G+    +DR    +       +   R+        
Sbjct: 23  PNASEYDKTEAFPE--EQLNQLSDMGVLRMPFDRLHGGLGGSFKDLLEVIRIVSRDCAST 80

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L++ +  S   +    T R  +   P + S E                  GL E   
Sbjct: 81  ASILLTQTSMSLWPIYQYGTERQKQKHLPAMLSGE-------------TFGAFGLNELGM 127

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G ++  + +   +  +         +  ++  ++ +++ ++   + G       +     
Sbjct: 128 GNNLENMETLAVEKENYWELSGAKAFVSNAGKANVYLIGSKTIAKDGTSGYGIFIITAEM 187

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIMS 324
            GL     + K+G R+     LEF          L  S    E  + +   + L  A  +
Sbjct: 188 RGLTIGNREEKMGIRALPVASLEFDQICVSKENLLGGSCNGAEQCQSISDHMRLSIAAQA 247

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S   A++Y  +    G  LID    +  +A++  ++ AA AL  ++A       
Sbjct: 248 IGIAEGSFERALNYVSQDRKFGQRLIDLRNTQFKLAEMYTELQAAAALLDQVA------- 300

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +      IM  + K      +  +   A++  GG GY+    I R+ R++   +I  
Sbjct: 301 ---KNDQLDSIMVAMVKLKAANTSIEMTEMAIQVTGGYGYMRNNDIERYVRDAKLTAIYG 357

Query: 445 GSGNAMVLDVLN 456
           G+       +  
Sbjct: 358 GTLETQKDAIAK 369


>gi|327294361|ref|XP_003231876.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326465821|gb|EGD91274.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 432

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 42/401 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY------- 141
           P    W++  F P     +RR   +G +    DRS    +   +     A          
Sbjct: 46  PYAHEWEEQGFVPD--ETVRRFAKNGFYII--DRSKPEYMGGISLPAGIAPGEWDVFHTL 101

Query: 142 --------LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                   +        L   +      +    T +   ++ P++   E           
Sbjct: 102 IVADELNRVGYSGPVWGLNGGNSIGCPPIMNFGTEQQKLEYLPRVARGEIR--------- 152

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                 LG+TE   G+D++ I +  +K+          KW +++ +   +   A   G  
Sbjct: 153 ----FCLGVTEPDAGSDVSGIKTVAKKVGSHYIVNGAKKW-ITNGIWADYCTAAVRTGGP 207

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
           G   +  L+   +  G+  +R+ N  G  ++ +  LEF +       L+G  N     + 
Sbjct: 208 GHGGISFLIIPLAAEGVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGKENEGFKYIM 266

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L  A   +   RV + +A  Y+  R   G  L+   V++  I+ +   I    
Sbjct: 267 SNFNPERLSLASACIRLSRVCVEDAFKYSTIRETFGKPLLANQVIRAKISKMGQLIEPCQ 326

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EE 427
           A   +LA +   ++    +      M  + K    +    V  EA + +GG+GY    + 
Sbjct: 327 AFMDQLAYTIKTSEQTGRKTDI-GGMTALLKVMSTRCLEKVCREAQQIMGGAGYNKAGKG 385

Query: 428 RSIARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQ 467
             I    R+     +  GS   +  L V   L+    + E 
Sbjct: 386 SRIEAISRDVRVYVVGGGSEEILRDLSVREELKHMRKVMEA 426


>gi|255956277|ref|XP_002568891.1| Pc21g19000 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590602|emb|CAP96797.1| Pc21g19000 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 438

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 116/319 (36%), Gaps = 21/319 (6%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              VA        K W P +              +  +   LG+TE   G+D+A I +  
Sbjct: 130 CPPVARFGNAEQRKKWLPGV-------------ARGDIRFCLGITEPDAGSDVANIQTTA 176

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           Q+  +        KW +++ +   +   A   G  G   +  L+   +  G+  +R+ N 
Sbjct: 177 QRDGNHYVVNGSKKW-ITNGIWADYCTAAVRTGGPGRSGISLLVIPLATAGVTRRRMHNS 235

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            G  ++ +  +EF +       L+G  N     +        L  A  S+   RV   +A
Sbjct: 236 -GVNASGSTFIEFEDVRVPVENLVGQENKGFPLIMSNFNPERLALACASLRLARVCAEDA 294

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            +YA +R   G  LI++  ++  I    L I  A A   +L N  +  K R  +      
Sbjct: 295 YNYAIKRETFGSALIEKQAIQSKIFKFGLMIEPAYAFMEQLVNILELTKDRPSDDVNIGG 354

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVL 452
           M  + K    +     + EA + +GG+GY    +   I +  R++  + +  GS   M  
Sbjct: 355 MTALLKVMSTRALEKSVREAQQIMGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMAG 414

Query: 453 DVLNLLEKGTNLFEQLFST 471
             L    K      +    
Sbjct: 415 LALREETKAIRTRRKALEK 433


>gi|288931877|ref|YP_003435937.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894125|gb|ADC65662.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM
           10642]
          Length = 355

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 132/362 (36%), Gaps = 41/362 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +    ++ G    +  + +    +        A           H +     +   + +
Sbjct: 25  EVFEEVVNSGALALMIPKEYGGEGKDYYEMSLIAEKLAYYSAGVAHSVIVHGMAVDALRI 84

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISD 223
             +    K + PK+                     L +TE  GG+D+A A+ ++ ++  D
Sbjct: 85  FGSEEQKKKYFPKLMKGF---------------GTLAITEPTGGSDVANAVKTKAERKGD 129

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            +Y ++G+K  +++   ++ FI++A+     G   +   + +    G+   ++ +  G R
Sbjct: 130 -VYVINGNKTLITNGEFAELFIVIART--GEGAKGLTAFIVERG-EGIETTKI-DLSGMR 184

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAI 336
            +    + F +         NV  G  + M++ +       +  A M +   +  L  A+
Sbjct: 185 GSGLASVRFKDVEVPA---ENVIGGEGKGMRVALGTLAPNRIPFAAMGIGIAQRCLDLAV 241

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
             A+ R   GG L D   ++  +A++A D+ A   L +    + D   +           
Sbjct: 242 ERAKSREAFGGRLADLQAVQFMLAELAADVEALRKLIY--GFAKDMGDTN--------YS 291

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             I K    ++A      AME  GG G +    +   +R++    I  G+   M L +  
Sbjct: 292 GAICKLKAAEVAKKAADIAMEIYGGFGLLSNSKVEMAHRDAKVLDIAEGATEVMKLLIAR 351

Query: 457 LL 458
            L
Sbjct: 352 KL 353


>gi|255945095|ref|XP_002563315.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588050|emb|CAP86121.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 425

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 79/403 (19%), Positives = 144/403 (35%), Gaps = 31/403 (7%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRS 123
           + +        +A  +T + +       R  +   +  +   +L      GL  +  +  
Sbjct: 38  LAAAELFTDEELAIQDTARQYCQDKLAPRVLEAYRNEDYDRRILEEMGDLGLLGASIEGY 97

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
               V   A  +    +  +       +   S  + + +    T    + + P +     
Sbjct: 98  GCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIYEFGTEEQKQRFLPSL----- 152

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHK-WFLSSPMS 240
                    K ++A   GLTE   G+D  ++ +  +      G+Y LSG K W  +SP++
Sbjct: 153 --------AKGTLAGCFGLTEPNHGSDPGSMETVAREHPTQKGMYLLSGSKTWITNSPIA 204

Query: 241 DAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           D  ++ A++E  G++  F+V R  E  +P       +KNK   R++ T  ++  N     
Sbjct: 205 DVALVWAKLESTGKIRGFIVER--ERATPGSYETPAIKNKSALRASITGMIQMDNCPVPA 262

Query: 299 LGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQPVM 355
              L    G       L    L  A  ++  +   LA A  Y+  R    G  L    ++
Sbjct: 263 ENMLPEVEGLKGPFTCLNSARLGIAFGAMGALEDCLARAREYSLERKQFKGNPLAKYQLI 322

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+ A D A  T  + ++A   D  K+  E       M  + K   C  A A     
Sbjct: 323 QMKLANAATDAAYGTLAAVQVARLKDAGKATPE-------MISMIKRQNCDRALANSRIL 375

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E  GG+   +E  IARH           G  +   L +   +
Sbjct: 376 QEVFGGNAASDEYHIARHVANLFVVQTYEGQSDIHALILGRAI 418


>gi|145225092|ref|YP_001135770.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217578|gb|ABP46982.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 402

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 124/372 (33%), Gaps = 36/372 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG--HLMSPSVTSASM 161
             L +R    GL                A     A + L A        +      S   
Sbjct: 59  KELGKRFGELGLLGM--HLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFS 116

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +     +W P++ S                    GLTE   G++ A + ++G++ 
Sbjct: 117 IHRYGSEEQKNEWLPRLASG-------------DAIGCFGLTEPDFGSNPAGMRTRGKRD 163

Query: 222 SDGI---YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             G    + L+G K ++++  ++D   + AQ +  +  FLVP         G     +  
Sbjct: 164 GSGENADWILNGTKMWITNGNLADVATVWAQTDEGIRGFLVPT-----DTPGFTANAIHR 218

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           K+  R++ T EL   N        L  + G    +  L          ++   R SL   
Sbjct: 219 KLSLRASITSELVLDNVRLPASAQLPEAVGLSAPLSCLNEARFGIVFGALGAARDSLETT 278

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y + R V    L    + +  +A++ +++     L+  L    D    R E+      
Sbjct: 279 IAYTQTREVFDRPLAGYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQ------ 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K    + A A+  E    +GGSG   E S  RH     +     G+    +L + 
Sbjct: 333 -VSLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIG 391

Query: 456 NLLEKGTNLFEQ 467
             L  G   F  
Sbjct: 392 KALT-GHAAFRA 402


>gi|148657080|ref|YP_001277285.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148569190|gb|ABQ91335.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1]
          Length = 418

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 119/360 (33%), Gaps = 41/360 (11%)

Query: 121 DRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           D+  +P  R                               + V    TP   + +  +  
Sbjct: 69  DKEGKPRPRIGYLMLAHVVEALSWGDAGLYLCTPGGALGGAAVDATGTPEQKERFLKRFG 128

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238
             E                 + +TE   G+D AAI +  +   DG  + L+G K F++  
Sbjct: 129 EGE------------PKWAAMAMTEPHCGSDTAAIRTTARLSEDGKEWILNGEKIFVTGG 176

Query: 239 MSDA------FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  A       ++ A V+   G   +   + +    G+   +L++K G R + T  + F+
Sbjct: 177 LMAAKESRGFVVVWATVDPSAGRAGMKPFVVEAGTPGMTVTKLEHKHGIRVSDTAAIVFN 236

Query: 293 NTFGFLLGDLN---------VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           +        L             G    MK         A  ++   R +L     Y + 
Sbjct: 237 DCRIPYDNILGSPEVVKGDTEHKGFKGAMKTFDATRPLVAASALGIARAALEFTASYLKD 296

Query: 342 RHVSGG--ILIDQP-VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           R V     I       ++R +  + +   AA  L  +     D  +  + EA+ +++ A 
Sbjct: 297 RGVKVRYGIAPHLQTAVERDLIHMEMQHRAAWLLVLKAVTKMDAGEENALEASMSKVKAG 356

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +  + A       +E +G  GY  +  + +  R++  N I  G+G    L V   L
Sbjct: 357 QVATYVSQKA-------VELLGPEGYSCKLLVEKWMRDARINDIYEGTGQINRLIVARRL 409


>gi|78060605|ref|YP_367180.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383]
 gi|77965155|gb|ABB06536.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383]
          Length = 380

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 124/363 (34%), Gaps = 28/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +    +    G    +   S          + + A  L       A  ++ P+ T+ +++
Sbjct: 40  YEAYDKIAKQGWLGILIPESEGGSGGDIFDYSLMAEGLGKFGFDFACSVLVPTFTAMNII 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   K +               P     +   + ++E   G+D A   ++ ++ +
Sbjct: 100 K-FGTPEQKKQYV-------------QPFIDGKIRFSVSISEPDAGSDAANTKTRARRDT 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G + +SG K + S   +   ++  L +         +  LL   +  G+   +L   + 
Sbjct: 146 NGDWIVSGQKLWCSGAAAKDTVIAMLVRTSTDDKHKGLSVLLIPNNTPGMVINKLPT-LS 204

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T E+           LLG+       + +   L     A       + ++  A  
Sbjct: 205 RHATGTTEIFLDEVRVPGDALLGEEGQGWKIITEHLELERCAVAAAYTGNAQQAVTTATR 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R      L D  V++  +AD    + AA  L +R A    +    S E + A    
Sbjct: 265 YAHDRIQFDHQLYDFQVIRHLLADCQTKVDAARLLCYRAAQLAADHVPCSREVSMA---- 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K +  +         M+ +GG   + E  + R+ RES  ++I  G+       +   
Sbjct: 321 ---KLYGSETLKECALAGMQILGGYANLPEADMERYLRESIQSTIGGGTSQIQRTIIAKS 377

Query: 458 LEK 460
           + +
Sbjct: 378 MRQ 380


>gi|296392631|ref|YP_003657515.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296179778|gb|ADG96684.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 611

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 94/521 (18%), Positives = 191/521 (36%), Gaps = 81/521 (15%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR--MAN------YNTPQ 83
           I  N +     L  L     S  + +L++     +    ++LA   +A+       N P 
Sbjct: 11  IEFNLFE----LFGLEETLASGDYGDLDVDAVKDILRETRKLAEGPLADAWVGPDRNPPV 66

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
              Y P     D           ++     G      D     +   +A    +A + L 
Sbjct: 67  ---YDPEKFEAD---LPEELQRAIKLINESGALQLCMDPELGGIPAPRALGWASAEM-LW 119

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A    +  V  A ++  + T    + W   I  + +D T             + LT
Sbjct: 120 GANAAAMFYTWGVPFAQILYDIATDEQKQ-WCKVIAEQNWDAT-------------MVLT 165

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------ 251
           E   G+D+ A  ++  +  DG + + G K F+S   S         ++LA+ EG      
Sbjct: 166 EADAGSDVGAGRTKAVEQPDGTWHIEGVKRFISGATSGDLFDNIFHLVLARPEGARAGTK 225

Query: 252 RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGD 301
            +  F VP+   D      G  NG+    L++K+G +++ T EL F        G+L+G 
Sbjct: 226 GLSLFFVPKWHYDFEKRERGERNGVFVTNLEHKMGIKASTTCELAFGQHGIPAVGWLVGG 285

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGIL 349
           ++     + D+     +   I S + +      A+ +A+ R                  +
Sbjct: 286 VHDGIAQMFDVIENARMTVGIKSTATLSTGYLNALEFAKERVQGSDFTQMLNKDAPRVTI 345

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYAR----IMAPITKY 402
           +  P ++R++ +         AL    A   D A   +    +   A      + PI K 
Sbjct: 346 MRHPEVRRSLLEQKAYAEGLRALYLLAAAYQDPAVAQRLFGADEDLAYRVNDFLLPIVKG 405

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460
           +  +   A +A++++  GGSG++++  I ++ R++  +++  G+     LD     ++  
Sbjct: 406 FGSEQGYAHLADSLQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQSLDFFFRKIVRD 465

Query: 461 GTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLCKE 496
                  +   +++ + SS      K+   +LR ++   + 
Sbjct: 466 QAGALNHITGQIQEFVDSSAGNGRLKEARELLRAALGDFQA 506


>gi|294853235|ref|ZP_06793907.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294818890|gb|EFG35890.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 211

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDS 320
            +P GL   +   K+G +   T ++ F N        +      G    MK+L    L  
Sbjct: 15  ATPPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVLDKGRLHI 74

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A +S       LA+ + YA  R   G  + D  +++  +AD   +I AA  +    A   
Sbjct: 75  AALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKR 134

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++ S E       A   K +  +M   V    ++  GG+GY+ E +I R YR+    
Sbjct: 135 DSGQNVSTE-------ASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLF 187

Query: 441 SILLGSGNAMVLDVLNLLEKGTN 463
            I  G+     + +   + +   
Sbjct: 188 RIYEGTTQIQQIVIARNMIREAR 210


>gi|212544850|ref|XP_002152579.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065548|gb|EEA19642.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC
           18224]
          Length = 426

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 38/309 (12%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           +    T      + P++              K  +    GLTE   G+D  ++ +  +  
Sbjct: 137 IHEFGTQEQKDRFLPQL-------------AKGKLLGCFGLTEPNHGSDPGSMETVAREH 183

Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRL 275
               G Y LSG K W  +SP+SD  ++ A++E  G++  FL+ R      P G L    +
Sbjct: 184 PTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIKGFLIER---SKCPPGTLETPAI 240

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRV 330
           KNK   R++ T  ++  N    +   L  + G          L+SA + ++      +  
Sbjct: 241 KNKTALRASITGMIQMDNCPVPVENMLPDAEGLS---GPFTCLNSARLGIAFGVTGALED 297

Query: 331 SLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
           S++ A  YA  R    G  L    ++++ +AD + D A  T  + ++A   D  KS  E 
Sbjct: 298 SISRAREYALDRKQFRGNPLAKYQLIQKKLADASTDAAFGTLAAIQVARLKDAGKSTPE- 356

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 M  + K   C  A A      E  GG+   +E  I RH           G  + 
Sbjct: 357 ------MISMIKRQNCDRALANARTLQEIFGGNATSDEYHIGRHVANLFVTQTYEGQSDI 410

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 411 HALILGRAM 419


>gi|261203511|ref|XP_002628969.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239586754|gb|EEQ69397.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239608213|gb|EEQ85200.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327349398|gb|EGE78255.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 440

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 87/463 (18%), Positives = 165/463 (35%), Gaps = 48/463 (10%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMA 77
            A N P        +S    L    + + +  H+  +      L E ++S  A E  R  
Sbjct: 1   MATNSPNPI----PFSEPPYLCGFPSPYYTEGHRRFQKACRAFLWENLISH-AFEWEREG 55

Query: 78  NYNTPQLHAYGPGGERWDKVEFHP---AWHALLRRSIHD--GLHCSIWDRSFEPVVRKQA 132
                  H +         +   P   AW  L +  IHD  G+    WD  +  +   + 
Sbjct: 56  TVPEHVWHTFAQHNMLLPNLA-SPLPVAW--LKKLGIHDILGVKVEDWDLLYTGIYLDEM 112

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           ++   +            L +        V    +P +H+ + P++ +            
Sbjct: 113 NRSGLSG-------PPTSLCAGMAYGVPPVIKFGSPELHERFLPELLTC----------- 154

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEG 251
                  + +TE   G+D+A IT+   K +DG  Y ++G K ++++ +   +  +A   G
Sbjct: 155 --KKRSCIAITEPDAGSDVANITTTANKTADGKHYIINGTKKWITNAIWADYTTMAVRTG 212

Query: 252 RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
             G   +  ++    +  G+  +RL    G  +  T  +E  +       L+G+  +   
Sbjct: 213 GPGASGLSLVIVPLKNQPGVTMRRLSVT-GQAAGGTTFIELDDVKVPVENLVGEEGLGMK 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +        L   +  V   RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ 
Sbjct: 272 YIMTNFNHERLTIVVGVVRQARVALSAAFEYCLKRQAFGKTLMDQPVVRHRLAKAGAELE 331

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE- 426
           +  A + +     +   S+ E       +  + K     +       A+   GG+G    
Sbjct: 332 SLWAWTEQFLYQVNN-MSKDEGDFRLGGLTALAKAKAGMVLNECAQVAVLLFGGNGLTRT 390

Query: 427 --ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  R YRE P   I  GS + ++   +  L K     EQ
Sbjct: 391 GQGEVAERIYREVPGVRIPGGSEDVLLDLSVRQLVKVFKAQEQ 433


>gi|302528905|ref|ZP_07281247.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302437800|gb|EFL09616.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 381

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 109/357 (30%), Gaps = 25/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+      GL                     AA         A +L+  S   + ++  
Sbjct: 40  QLVADLASMGLTGLRIPERHGGQEASAVVAGMAAEEVARGDFNAAYLIIVSALVSDILTR 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W P I S E  P                +TE   GTD A +  + +    G
Sbjct: 100 NATEEQQAAWLPPIASGEVVP-------------AFCITEPGHGTDAATLEMKAEPDGAG 146

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                          +D  ++LA+  G  G   V     +     +      + +G+R+ 
Sbjct: 147 WRLTGEKTSITLGMSADVALVLART-GGPGARGVSAFWVELDDAYVSRAAFDD-LGSRAI 204

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
               L F         L+G        V            +  +   +VSL EA+ ++R 
Sbjct: 205 GRASLHFDGLPVPKEALVGGEGHGFVSVMQGFDYSRAIIGLACLGAAQVSLDEALQWSRD 264

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     +   +A+ A  +  A  + +      D     S EAA A+  AP   
Sbjct: 265 REAFGSPIGTFQGVAFPLAEQATYLRGARHVCYEALWRKDNDVEHSTEAAMAKFWAP--- 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               K+A   I + +   G  GY  E  + +  R+     I  G+     L +   L
Sbjct: 322 ----KLAAETIHQCLLTFGHLGYSSESPVGQRLRDVIGLEIGDGTAQVSKLVIARNL 374


>gi|258572814|ref|XP_002545169.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
 gi|237905439|gb|EEP79840.1| acyl-CoA dehydrogenase [Uncinocarpus reesii 1704]
          Length = 442

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 115/345 (33%), Gaps = 26/345 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              +    DG         +       A  I  A + +    E+G  MS + +    +  
Sbjct: 94  DFQQALAKDGWLGICLPTEYGG----AALGISEAAVMMQTVSESGAGMSGASSVHMNI-F 148

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P V      K  S E       P+ +       G+TE   G D   + S   +  D 
Sbjct: 149 GLEPVV------KFGSEEQKKRFLPPLIEGKERACFGVTEPNSGLDTLKLKSMATRAGDH 202

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                   W  ++  ++  ++L +             +     D   + +    +  K+G
Sbjct: 203 YILKGSKVWISTAQNAEKILILVRTTPVDKVSKPSHGLSLFYTDLDRSQVEVTEIP-KMG 261

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T  L F +       LLG+       +        +  A  ++     +L  A  
Sbjct: 262 RAAVDTNTLFFEDWRVPAEDLLGEEGNGFKMIMHGMNAERILIAAEALGLGFAALRRAAI 321

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R V G  +     ++  +AD  + + AA  + ++ A  +D   S  E A  A+ +A
Sbjct: 322 YANERQVFGRPIGQNQGIQHPLADSWMQLEAARLMVYQAARLYDAGHSTGEYANAAKYLA 381

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +  C+ A       +   GG GY +E  + R+ RES    I
Sbjct: 382 AEAAFRACERA-------VMSHGGMGYAKEYHVERYLRESFIPRI 419


>gi|229584314|ref|YP_002842815.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
 gi|228019363|gb|ACP54770.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.27]
          Length = 514

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 116/376 (30%), Gaps = 32/376 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G   + +  +     L ++ +  G    +  R +  +          +  Y+      G
Sbjct: 26  RGRAEEALWKNEYPMDLHKKIVEKGWWGVVIPREYGGMGGDYTSVAIISE-YISNLGSVG 84

Query: 150 HLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            + + ++      +             PK                      + +TE   G
Sbjct: 85  GVFATTLFGGLYQILRFGNEEQKAKSLPKF--------------AKGTVGAVCITEPYVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           +D A   +   K  D  Y ++G K F+++  M+D +++ A  +     R     +   + 
Sbjct: 131 SDAAGAETIAIKEGD-KYIINGKKRFITNAGMADIYVVYAVTDPSSKARKSYSHLSAFIL 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDS 320
           +    G   +++    G        L+  +    +     +       +        L  
Sbjct: 190 EKGMKGFHVEKINELQGFDGLLNGYLDLDHVEVPVENRLSEEGQGWWILVSGLNFERLVI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V  +R        Y RRR        +    +  +ADI +D      L++  A   
Sbjct: 250 GAQQVGLLRELARYVAFYTRRRVQFNQPTFEYEANQYKLADIIIDYRITRLLTYYTAYLM 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+      +       A + K +  +       +A++ +GG G+ +   +   YR +   
Sbjct: 310 DQGVDPVLD-------ANVLKAFSTEAVEKASRDAIQAMGGDGWTKFYPVEAIYRNAKLG 362

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   +   ++ 
Sbjct: 363 TIGGGTSEVLKRFIVR 378


>gi|134101910|ref|YP_001107571.1| putative glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291009207|ref|ZP_06567180.1| putative glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133914533|emb|CAM04646.1| putative glutaryl-CoA dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 393

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 62/407 (15%), Positives = 130/407 (31%), Gaps = 32/407 (7%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
            +     E +      ELA +  Y   ++       E W   EF       + +    G+
Sbjct: 8   PDFFGFAELLSESERAELAEIREYLEREIKPI--ANEAWANAEFPA---EAIEKFAKLGV 62

Query: 116 HCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
               +    +   R        +  L  +    A      S  +   +           W
Sbjct: 63  AGVQYPDYGDGKPRSALFTGFLSVELNRVDPSLAVFSGVHSGLAMGSIHGGGDQEQRDRW 122

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKW 233
            P + +              +      LTE  GG+D+A  + +  ++  D        +W
Sbjct: 123 MPDMVAM-------------NKIGAFALTEPEGGSDVAGGMRTTARREGDEWVLDGAKRW 169

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +   +D  ++ A+ E           + +    G    +++ KI  R+    ++    
Sbjct: 170 IGNGTFADLVVVWARDEADGNVKG---FVVEKGTPGFTATKIEGKIALRTVQNADIVLDG 226

Query: 294 TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                   L       +  ++L       A  +V     +   A  YA  R   G  +  
Sbjct: 227 VRVPEANRLQGINSFRDTARVLAKTRGGVAWQAVGVAMRAYELAREYAVERVQFGKPIAS 286

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             +++  +  +  ++ A   +  RLA   ++  + +++AA A       K +       V
Sbjct: 287 FQMIQDLLVKMLGNVTAMFGVVVRLAQLTEQGTAGADQAALA-------KAFTTTRMREV 339

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++ A E  GG+G + +  IA+ + ++ A     GS     L V   +
Sbjct: 340 VSWARELFGGNGIVLDHEIAKFFSDAEAVYSFEGSREMNTLIVGKSI 386


>gi|298524975|ref|ZP_07012384.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE15 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|298494769|gb|EFI30063.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE15 [Mycobacterium
           tuberculosis 94_M4241A]
          Length = 443

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/423 (17%), Positives = 144/423 (34%), Gaps = 63/423 (14%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L           A+     A+ N P    + P       +         ++     G   
Sbjct: 42  LAEAARLAEGPIAESFGY-ADRNPPV---FDPNTH---SISVPDELAKTVQAIKEAGWWR 94

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
                    +            +   A   A       V  A  + +       + WA +
Sbjct: 95  LGLAEEIGGMPAPPPLAWAVNEMIYCANPSACFFNLGPVL-AQSLYIEGNDEQ-RRWAAE 152

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
              R +  T             + LTE   G+D+ A  ++  +  DG + + G K F+S 
Sbjct: 153 GVQRGWQAT-------------MVLTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISG 199

Query: 238 PM------SDAFIMLAQVEG------RVGCFLVPRLLED------GSPNGLCYQRLKNKI 279
                   +   ++LA+ EG       +  F VP  L D      G+ NG+    L++K+
Sbjct: 200 GDVGNTAENIFHLVLARPEGAGPGTKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKM 259

Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           G +S+ T EL F        G+L+G ++     +  +     +   + S   +      A
Sbjct: 260 GLKSSPTCELTFGGADVPAVGYLVGGVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNA 319

Query: 336 IHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           + +A+ R                  ++  P ++R++           AL    A   D+A
Sbjct: 320 LAFAKERVQGADLTQMTDKTAPRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDA 379

Query: 384 KSRSEEAA---YARI----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
            ++    A    A      + PI K    + A  ++ E+++ +GGSG++ +  + ++ R+
Sbjct: 380 VAQRVSGADHDMAHRVDDLLLPIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRD 439

Query: 437 SPA 439
           +  
Sbjct: 440 AKI 442


>gi|76802761|ref|YP_330856.1| acyl-CoA dehydrogenase 4 [Natronomonas pharaonis DSM 2160]
 gi|76558626|emb|CAI50218.1| acyl-CoA dehydrogenase 4 [Natronomonas pharaonis DSM 2160]
          Length = 388

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 105/348 (30%), Gaps = 31/348 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM---AQLEAGHLMSPSVTSASM 161
                    G H       +            A               +L+  +  +A  
Sbjct: 40  DFWDELGEAGFHGLAVPEEYGGAGMGMQELGLAMETLCAEGCGMAGTWYLVLTAGMAAVG 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +      +  + +   I + + +               +G+TE   GT+   + +  +K 
Sbjct: 100 IKQHGDEQQKETYLTDIATGDRN-------------FSIGITEPEAGTNTLNVATTAEKD 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W   S  +D  I++ +   R     G   +   + D    G+    ++ 
Sbjct: 147 GDEYVLNGQKAWITFSDRADNMILVTRTTPRSEVDRGTDGISLFIVDMDSPGIEVSPIE- 205

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K     + + E+   +       LLG+       +  M     +  A   V   +++   
Sbjct: 206 KHAMNYSKSCEVFLEDVRVPEADLLGEEGDGWRALVSMLNPERIGFAAAGVGIGKLAAHT 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI YA  R V G  +     +   I      + AA  +  +    +D+ +    E     
Sbjct: 266 AIDYANDREVFGDPIGTHQAVSFPITKPYARLEAAKLMRQKAEWLYDQGEDCGYE----- 320

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               I K    +     + ++M+  GG GY  E  + R +RE     +
Sbjct: 321 --TNIAKATAVEAGIETVKQSMQAFGGWGYATEYDVERWWREINLTRL 366


>gi|257791587|ref|YP_003182193.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317488000|ref|ZP_07946582.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475484|gb|ACV55804.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912902|gb|EFV34429.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 384

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 135/388 (34%), Gaps = 35/388 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+     +      R   +    ++++    P    +A+  R A    M   E    + 
Sbjct: 7   VDQELLIESIQEFAERYFDEDTVNAMYENHGIPDEIGEAY--RDAGFAFMGLPEECGGIP 64

Query: 154 P----------------SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                               +  M A++ T  V +   P+  S   D  NK+        
Sbjct: 65  CDKLTLGLMTETLYHRTGCMTPFMTAMLATADVAEFGTPEQVSLVVDQYNKS----GKPI 120

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
             L L+E   G+D  A+++  ++  DG Y ++G K ++++  +  ++++   +       
Sbjct: 121 ASLALSEPGAGSDNKAMSTYTKRQDDGTYIMNGQKTWVTNGGNTPYMLVVSKDEHPAHAN 180

Query: 258 --VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKI 314
             +   L      GL    L +KIG +    V++ F          L     G +  MK 
Sbjct: 181 ESMSLWLIPTDAPGLSTAPL-DKIGQQIIPFVDVFFDEVRLTEDMRLGKEGEGFLLLMKN 239

Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A  S+   +  + +A  YA  R+  G  +   P+++  +A++   +  +  +
Sbjct: 240 FEIERCLVAAQSLGLAQACMDDAAAYANERYAFGKPIGWNPMIQDMLAEMETILENSRNM 299

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++     D+ +S   EAA  +  A +           V   A+E     GY     + R
Sbjct: 300 LYKTLWQLDQGESVRTEAALLKRYATVG-------CTKVADMALEIFAALGYTTASRVGR 352

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +   N +  G+   M       + K
Sbjct: 353 IWTDLRGNQLAGGTVEIMSYIAGRQILK 380


>gi|215428220|ref|ZP_03426139.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T92]
          Length = 325

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 111/301 (36%), Gaps = 30/301 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P + + E                   +TE   G+D    + + 
Sbjct: 44  AATIMSRGTLAQQERWVPTLVTLE-------------KIAAWAITEPDSGSDAFGGMKTH 90

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEGRVGCFL----VPRLLEDGSPNGLC 271
             +  +  Y L+GHK F+++   +D  ++ A+  +G          V   + D    GL 
Sbjct: 91  VTRDGED-YILNGHKTFITNGPYADVLVVYAKLADGEPASDWRNRPVLVFVLDAGMPGLT 149

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +   K+G  S+ T EL F N       LL               +  L  A+MS+  +
Sbjct: 150 QGKPFKKMGMMSSPTGELFFDNVRLTPDRLLCAEGDGRDSARANFAVERLGVALMSLGII 209

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                  + YA+ R + G  +    +++  +A + +       + F+        K  + 
Sbjct: 210 NECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMVFQAIERLKAGKQLTL 269

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ A  I  GS  
Sbjct: 270 AEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKALMIYAGSNE 323

Query: 449 A 449
            
Sbjct: 324 V 324


>gi|254418992|ref|ZP_05032716.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
 gi|196185169|gb|EDX80145.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           sp. BAL3]
          Length = 387

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 120/356 (33%), Gaps = 32/356 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLM 152
           ++  F   +H  +      G         +        +A  +  A         A   +
Sbjct: 33  EEARFPQEFHRAM---ADGGWLGITMPEEYGGAGLGVTEAAIMMHAVASSGGGQSAASAL 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++     + +  +P     W P + + +                  G+TE   G D  
Sbjct: 90  HINLFGPHSIVVHGSPEQKARWLPPLIAGDQR-------------ACFGVTEPDAGLDTT 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNG 269
           +I++   K+  G        W  +  ++D  ++L +    +       +     D     
Sbjct: 137 SISTFATKVDGGYRVSGRKMWTSTGQVADKILLLTRTSPKDEARPTHGLTLFYADLDRTQ 196

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  +R+ +K+G  +  +  +   + F      +G+     G +        +  A  +V 
Sbjct: 197 IEVRRI-HKMGRNAVDSNAVFIDDYFIPEADRIGEEGKGFGYILHSLNPERVLVASEAVG 255

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L  A  YAR R V G  +     ++  +A+    + AA  ++ R    +D+ +  
Sbjct: 256 LGRDALRRAATYARERVVFGRPIGQNQGIQHPLAECWTKLEAAWGMTLRAGWLYDQGRPC 315

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             EA  A+ +A          A      A+   GG GY  E  + R +RES  + I
Sbjct: 316 GAEANAAKFLAGQA-------AFDTTTRAVLTHGGMGYAREYQVERLFRESILSRI 364


>gi|73541524|ref|YP_296044.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72118937|gb|AAZ61200.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 394

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 117/363 (32%), Gaps = 26/363 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +    +    G    ++                 A        +    +     +A  + 
Sbjct: 53  YEAYDKIAKQGWLGLLFSEEEGGAGGDIFDYTLMAEGLGKFGFDFAAAVLVPTFTAMNIG 112

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      +               P     +   + ++E   G+D +   ++ ++  +
Sbjct: 113 KYGTAAQKDKYIK-------------PFIDGKIRFSVSISEPDAGSDASNTKTRARRDEN 159

Query: 224 GIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G + +SG K + S   +   ++  L + +       +  LL   S  GL   +L   +  
Sbjct: 160 GDWIVSGQKLWCSGAAAKDTVIAMLVRTDADNKHGGLSVLLIPNSTPGLVINKLPT-LSR 218

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            +  T E+           LLG+       +     L     A   V   + ++++A  Y
Sbjct: 219 HATGTTEIFLDEVRVPADALLGEEGQGWEIITKHLELERCAVAAAYVGNAQTAVSKATQY 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L D  V+K  +AD   ++ AA  L +R A         S E + A     
Sbjct: 279 AHERIQFGKQLWDFQVLKHMLADRQTEVDAARLLCYRAAQMAAADVPCSREVSMA----- 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +  +         M+ +GG   + E  + R+ RES  ++I  G+       +   +
Sbjct: 334 --KLYGSETLKQCALTGMQVLGGYANLPEADMERYLRESVQSTIGGGTSQIQKTIIAKSM 391

Query: 459 EKG 461
             G
Sbjct: 392 RIG 394


>gi|302552880|ref|ZP_07305222.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470498|gb|EFL33591.1| glutaryl-CoA dehydrogenase [Streptomyces viridochromogenes DSM
           40736]
          Length = 400

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 115/359 (32%), Gaps = 28/359 (7%)

Query: 105 ALLRRSIHDGLHCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            L+      GL    ++      P V        A  +       +      +  +   +
Sbjct: 58  ELIGLFRDSGLAGLPYEGYGEHAPAVSNLLSGTMAMEMARTDASVSTFFGVHNGLAMYSI 117

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKI 221
                      W P              M          +TE  GG+D+A  + +  ++ 
Sbjct: 118 HSGGDQEQRDRWLP-------------AMATMDKIGAFAMTEPLGGSDVAGGMRTTARRE 164

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D        KW  ++  +D  ++ A+             + +    G    +++ KI  
Sbjct: 165 GDTWVLNGAKKWIGNATFADYVVVWARDVDDNHVKG---FVVEKGTPGFDPVKIEGKIAF 221

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           R     E+  ++        L       +  +IL       A  ++  M  +   A+ YA
Sbjct: 222 RIVENAEITLTDVRVPEANRLRNIDSFRDVAEILRATRAGVAWQALGVMIGAYELALDYA 281

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  +    +++  +     +I A+  +  +LA   D    R E ++ A      
Sbjct: 282 RERKQFGRPIGGFQLVQDLLVKSLGNITASWGMLVQLARLQDAGIFRDEHSSLA------ 335

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K +       V+A + E  GG+G + E  IAR + ++ A     G+     L V   +
Sbjct: 336 -KAFVTSRMREVVAWSRELFGGNGILLEHDIARFFADAEAIYSFEGTREMNTLIVGKSI 393


>gi|126513537|gb|ABO15874.1| acyl-CoA dehydrogenase [Streptomyces sp. UC 11065]
          Length = 379

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 72/357 (20%), Positives = 130/357 (36%), Gaps = 41/357 (11%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           R+   G H ++     +  +  +A     A   L+    A          A  V    T 
Sbjct: 55  RAYGGGGHGAL-----DTALLVEALGRGCAETGLVFGASAHLFAC-----AMPVVDYGTE 104

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
            + K   P I S E             +  G  +TE   G+D++ ++    + +DG + L
Sbjct: 105 ELRKRILPGICSGE-------------LIAGNAMTEADAGSDVSKLSVTATR-ADGGWVL 150

Query: 229 SGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
           +G K F+S+   +D +   A  + + G F V   + + S  G+      +K+G       
Sbjct: 151 NGEKSFVSNGPAADVYTTYATTDPKAGPFGVTGFIVERSAPGVTASEPFDKMGLLQCPAG 210

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARR 341
            + F +TF     D NV   P +   I  + +      +    V LA+      + + + 
Sbjct: 211 SVRFEDTFVP---DENVLGEPGQGGWIFQHSMGWERACLFAGYVGLADRVLESCVAHVKG 267

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L +   +   IAD+ L + +A  L +R     DE          A +   ++K
Sbjct: 268 RRQFGKRLSEFQAVSHRIADMKLRLESARLLLYRACWEMDEGLP-------ATLSIALSK 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +   A   +A+   GG GY     I    R++  + I  G+ +     +   L
Sbjct: 321 LAVSEGVVASALDAVRLFGGRGYQRADRIEAALRDAVPSVIFSGTSDIQRQLIAREL 377


>gi|322648387|gb|EFY44842.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
          Length = 316

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 113/316 (35%), Gaps = 12/316 (3%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   M      A    L   P     +  +  ++E      A            +TE   
Sbjct: 7   AAVWMELGRLGAPTYVLYQLPGGFNTFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGA 65

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D+ ++ +   + +  +Y      +  SS  +   +++A+        +      D S 
Sbjct: 66  GSDVGSLKTTYTRKNGKVYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSK 125

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+   +L+ K+G R ++  E+ F +       + G        V++         A+ +
Sbjct: 126 AGIKVNKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTN 184

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                 +  +A  YA +R   G  +    +++   A +A+ + +   +    A   D   
Sbjct: 185 YGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGT 244

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S +AA         KY+C   A  V+  AM+ +GG G      I R +R+   + +  
Sbjct: 245 ITSGDAAM-------CKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSG 297

Query: 445 GSGNAMVLDVLNLLEK 460
           GS    +L +   + K
Sbjct: 298 GSDEMQILTLGRAVLK 313


>gi|319763089|ref|YP_004127026.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317117650|gb|ADV00139.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 390

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 118/349 (33%), Gaps = 32/349 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA---GHLMSPSVTSAS 160
            A  +     GL                                +      M   +    
Sbjct: 39  KAYWKAVCDAGLAGVALPEEHGGSGLGMMEMTLIVEALSATGGGSTVGQLFMVNPIFGGV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++     ++ K+  PKI S + +               + LTE   GT+   I +    
Sbjct: 99  SISRFGNDKMKKELLPKIISGDMN-------------FCMALTEPDAGTNTLEIKTFAAA 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             DG        W      +D  +++A+     +       +   + D    GL +  + 
Sbjct: 146 DGDGWRLNGRKIWITGVESADKMLVIARTKKLQDAESRTDGLTMFMIDVKREGLSHTPI- 204

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G  +  +  + F N       L+G L+     + D+     + +    V    +++ 
Sbjct: 205 DKLGTCTLDSSSVFFDNVRVEPDELVGTLHKGWRELLDVLNTERMVTTAGLVGTGELAIR 264

Query: 334 EAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            A+ YA  R V G   +     ++  +A   +++ +A  L+++ A +FD     S EA  
Sbjct: 265 LAVDYANDRKVFGNRPISAYQGLQFPLAQCHVEVESARLLNYKAATNFDMGLPYSNEANA 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           A+++A        + A       M+ +GG GY +E  + R +R+     
Sbjct: 325 AKLIAAQAVARATERA-------MQTMGGMGYAKEFHVERLWRDCRLFR 366


>gi|148548909|ref|YP_001269011.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida F1]
 gi|148512967|gb|ABQ79827.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1]
          Length = 388

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 127/356 (35%), Gaps = 21/356 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +RS   G +  +   +              +   L A  EA  L    ++   +  
Sbjct: 44  QQVWQRSCEQGFYNIMLPEAIGG--------AGLSVSDLCAVKEATVLTGSMLSPHILGE 95

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L   PR+   +  K+ S         P+ +   A+   LTE   G+D  AI +  ++  +
Sbjct: 96  LSGPPRIGHLF--KVASPTQIEAFLQPVCRAEKAVCFALTESEAGSDATAIKTSARREGE 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++   +P +D  ++LA  +   G   +     D S +G+  +   + +    
Sbjct: 154 HYVLNGAKRYISGAPYADIAVLLAVTDPGRGAQGISAFFVDLSASGVRVESDYSVMSG-G 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
            A  ++   +        +       +     I L+  +     +    ++L  +I YAR
Sbjct: 213 GAHGDIILEDVRVPAANRIGEQGQGFKLAMGRITLNRLLHCPTLLGLAGLALNLSIDYAR 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   IAD+A ++ AA ++ +  A   D   +   +       AP+ 
Sbjct: 273 TRKQFGQPIAMFQSINHMIADMATELHAARSMVYATAAVNDAGGNIRTQ-------APMC 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  + A  +   A++  GG+G +    +   +R +    IL G+       +  
Sbjct: 326 KLFVSETAFRIADRAVQIHGGAGLLRGNPVEWIFRATRMMRILTGTSEIQRNTIAK 381


>gi|227827147|ref|YP_002828926.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|238619307|ref|YP_002914132.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
 gi|227458942|gb|ACP37628.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.14.25]
 gi|238380376|gb|ACR41464.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           M.16.4]
          Length = 514

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 116/376 (30%), Gaps = 32/376 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G   + +  +     L ++ +  G    +  R +  +          +  Y+      G
Sbjct: 26  RGRAEEALWKNEYPMDLHKKIVEKGWWGVVIPREYGGMGGDYTSVAIISE-YISNLGSVG 84

Query: 150 HLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            + + ++      +             PK                      + +TE   G
Sbjct: 85  GVFATTLFGGLYQILRFGNEEQKAKSLPKF--------------AKGTVGAVCITEPYVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           +D A   +   K  D  Y ++G K F+++  M+D +++ A  +     R     +   + 
Sbjct: 131 SDAAGAETIAIKEGD-KYIINGKKRFITNAGMADIYVVYAVTDPSSKARKSYSHLSAFIL 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDS 320
           +    G   +++    G        L+  +    +     +       +        L  
Sbjct: 190 EKGMKGFHVEKINELQGFDGLLNGYLDLDHVEVPVENRLSEEGQGWWILVSGLNFERLVI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V  +R        Y RRR        +    +  +ADI +D      L++  A   
Sbjct: 250 GAQQVGLLRELARYVAFYTRRRVQFNQPTFEYEANQYKLADIIIDYRITRLLTYYTAYLM 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+      +       A + K +  +       +A++ +GG G+ +   +   YR +   
Sbjct: 310 DQGVDPVID-------ANVLKAFSTEAVEKASRDAIQAMGGDGWTKFYPVEAIYRNAKLG 362

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   +   ++ 
Sbjct: 363 TIGGGTSEVLKRFIVR 378


>gi|26988764|ref|NP_744189.1| acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
 gi|24983559|gb|AAN67653.1|AE016395_4 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440]
          Length = 388

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 125/356 (35%), Gaps = 21/356 (5%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + +RS   G +  +   +              +   L A  EA  L    +    +  
Sbjct: 44  QQVWQRSCEQGFYNIMLPEAIGG--------AGLSVSDLCAVKEATVLTGSMLAPHILGE 95

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L   PR+   +  K+ S         P+ +   A+   LTE   G+D  AI +  ++  +
Sbjct: 96  LSGPPRIGHLF--KVASPTQIEAFLQPVCRAEKAVCFALTESEAGSDATAIKTSARREGE 153

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   ++   +P +D  ++LA  +   G   +     D S  G+  +   + +    
Sbjct: 154 HYVLNGAKRYISGAPYADIAVLLAVTDPGRGAQGISAFFVDLSAPGVRVESDYSVMSG-G 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340
            A  ++   +        +       +     I L+  +     +    ++L  +I YAR
Sbjct: 213 GAHGDIMLDDVRVPAANRIGEQGQGFKLAMGRITLNRLLHCPTLLGLAGLALNLSIDYAR 272

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   IAD+A ++ AA ++ +  A   D   +   +       AP+ 
Sbjct: 273 TRKQFGQPIAMFQSINHMIADMATELHAARSMVYATAAVNDAGGNIRTQ-------APMC 325

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K +  + A  +   A++  GG+G +    +   +R +    IL G+       +  
Sbjct: 326 KLFVSETAFRIADRAVQIHGGAGLLRGNPVEWIFRATRMMRILTGTSEIQRNTIAK 381


>gi|259506057|ref|ZP_05748959.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|259166345|gb|EEW50899.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 408

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 142/409 (34%), Gaps = 36/409 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  +    GE VL    +   +   +  P ++ Y      W++ EF    + +L      
Sbjct: 21  LDADFTQ-GERVLRDQVRAFGK--EHILPIINDY------WERAEFP---YEILEPLAGL 68

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           GL  ++      P + +  + I +  L  +           S  S   + ++ +    + 
Sbjct: 69  GLAGTVIKGYGCPGLSRLENGIVSRELGRIDGSICTFFGVHSGLSMGSINILGSEEQRRR 128

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           W P              M K        LTE   G+D  ++ +  ++  D        +W
Sbjct: 129 WLPD-------------MAKFRKTGAFALTEPNHGSDSVSLETSARREGDSWVLNGHKRW 175

Query: 234 FLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +    D  ++ A+ E    V  F+V +      P G   + +  K G R+    ++  
Sbjct: 176 IGNGHAGDIIVVYARDEADQQVKAFVVEKQRNGEYPPGYRAEVITGKTGKRAILQGDIVI 235

Query: 292 SNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
            N        L       +  ++L       A  S          A  YA +RH  G  +
Sbjct: 236 DNLRIPEENRLTNCHSFKDVNRVLAATRGGVAWESTGHAMAGFELAAQYALQRHQFGSPI 295

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++  +A +  D+     L  R+A   +  +       ++  MA +TK    K A 
Sbjct: 296 ASYQLVQTKLAHMLADVVENQLLCVRMAELQERGE-------FSTPMASLTKMTTAKNAL 348

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  EA + +GG+G +    IARH  +   +    G+ +   L V   +
Sbjct: 349 SICREARDMMGGNGLLLNNHIARHMTDMEVSYTYEGTDSIQALIVGRDI 397


>gi|85706548|ref|ZP_01037641.1| cyclohexanecarboxyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85668960|gb|EAQ23828.1| cyclohexanecarboxyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 393

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 119/357 (33%), Gaps = 25/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL+R+    GL  +    +F  +                A   A ++         MVA
Sbjct: 39  RALIRKMGALGLIGADLPEAFGGLGESSVTAGLIVEEIAYADFNASYVQLLGSLMGGMVA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +  +  +W PK+ S                 IGLGLTE RGG+D A +  +  K  +
Sbjct: 99  KHASKDIASEWVPKVVSG-------------DAVIGLGLTEPRGGSDAANLVLKATKSGN 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G            +  +DA ++ A+  +   G   V     D +  G+      + IG +
Sbjct: 146 GWRLNGEKTSMSFASQADAAVVFARTGDPDGGSRGVSAFFVDLNQEGIKRTHFDD-IGTK 204

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 + F + F     ++ + + + G +            +  +   + S+ E   Y 
Sbjct: 205 PVGRGSVFFDDVFVPAESMMAEQDRAFGTIMAGFDYSRALIGLECLGAAQASVDETWAYV 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  ++    +   +A+    +     L F   +  D     + EAA  +   P 
Sbjct: 265 REREAFGAPIVQYQGVSFPLAEAETQLTMMRQLCFYTLDLRDRGLPHTSEAAMCKWYLP- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 K A  ++ + +   G  GY  +    + Y +     I  G+     L +  
Sbjct: 324 ------KTACEILHQCLILHGHYGYTTDLPHHQRYNDVLGLQIGDGTAQIQKLVIAR 374


>gi|261205638|ref|XP_002627556.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592615|gb|EEQ75196.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 435

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 121/350 (34%), Gaps = 29/350 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD     VV  + +++    +          L   +      +          
Sbjct: 89  AGIEPEEWDIFHNLVVADELNRVGYTGV-------LWGLFGGNNIGCPPILDFGNEAQKL 141

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++ PKI              +  +   LG+TE   G+D+A I +   +  +        K
Sbjct: 142 EYLPKI-------------SRGEIRFCLGITEPDAGSDVANIRTTAIRRGNKYIVNGAKK 188

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   +  L+   +  G+  + ++N  G  ++ +  +EF 
Sbjct: 189 W-ITNGIWADYCTAAVRTGGEGRRGISLLIIPLAAKGVTRRIMENS-GVNASGSTFIEFD 246

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  AI  +   RV + +A +YA  R   G  L
Sbjct: 247 DVEVPVENLIGTENDGFRYIMSNFNPERLGLAISCIRLSRVCVEDAYNYATNRETFGQPL 306

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I   +++   + +   I    A   +LA +   A    +E      M  + K    +   
Sbjct: 307 ITNQIIRAKFSKLGRLIEPCQAFLEQLAYTIHVATKNGQEVN-VGGMTALLKVMSTRCLE 365

Query: 410 AVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V  EA + +GG+GY        I +  R+     +  GS   +    + 
Sbjct: 366 KVCREAQQVLGGAGYNKSGRGARIEQISRDVRVYVVGGGSEEILSDLAVR 415


>gi|289751446|ref|ZP_06510824.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T92]
 gi|289692033|gb|EFD59462.1| acyl-CoA dehydrogenase fadE21 [Mycobacterium tuberculosis T92]
          Length = 309

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 111/301 (36%), Gaps = 30/301 (9%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P + + E                   +TE   G+D    + + 
Sbjct: 28  AATIMSRGTLAQQERWVPTLVTLE-------------KIAAWAITEPDSGSDAFGGMKTH 74

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ-VEGRVGCFL----VPRLLEDGSPNGLC 271
             +  +  Y L+GHK F+++   +D  ++ A+  +G          V   + D    GL 
Sbjct: 75  VTRDGED-YILNGHKTFITNGPYADVLVVYAKLADGEPASDWRNRPVLVFVLDAGMPGLT 133

Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +   K+G  S+ T EL F N       LL               +  L  A+MS+  +
Sbjct: 134 QGKPFKKMGMMSSPTGELFFDNVRLTPDRLLCAEGDGRDSARANFAVERLGVALMSLGII 193

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                  + YA+ R + G  +    +++  +A + +       + F+        K  + 
Sbjct: 194 NECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMVFQAIERLKAGKQLTL 253

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ A  I  GS  
Sbjct: 254 AEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKALMIYAGSNE 307

Query: 449 A 449
            
Sbjct: 308 V 308


>gi|237798438|ref|ZP_04586899.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021289|gb|EGI01346.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 242

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           I S + MR +L +A H+   R V G +L  QP+M+  +AD+AL+  AA AL+ RL  + D
Sbjct: 2   IGSSALMRQALTQATHHCAHRAVGGRLLAGQPLMQNVLADLALESEAALALTLRLGRALD 61

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  E  + R++  + KYW CK APA+I EA EC+GG+GY+E+  + R YRE+P NS
Sbjct: 62  H-LDDDHERRFVRLITAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNS 120

Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGL 500
              GSGN   LDVL  L K     + LF  L    G     + I+ L+ +     + +  
Sbjct: 121 TWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLALHISKLKTAFHDTGDIEYR 180

Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDS 557
           AR LTE IA+A     L  AG   ++D F+  R   +    +  L    +   ++  
Sbjct: 181 ARQLTEDIAVAVQGKLLLEAGNAAVSDGFIAGRIA-SVGRVYGALPRGVDVETLLRR 236


>gi|240171311|ref|ZP_04749970.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium kansasii ATCC 12478]
          Length = 417

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 115/318 (36%), Gaps = 38/318 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 118 AATIMSRGTLAQKERWLPELMTLE-------------KVAAWAITEPDSGSDAFGGMKTH 164

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG--------RVGCFLVPRLLEDGSPN 268
            ++     Y L+G K F+++   +D  ++ A+++               V   + D    
Sbjct: 165 VKRDGAD-YILNGQKTFITNGPDADVLVVYAKLDDGPVGDSDADRRNRPVLTFVLDAGMP 223

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSV 325
           GL   +   K+G  S+ T EL F N        L           +     + A   + V
Sbjct: 224 GLTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGEQEQHTNGDGRDSARANFAAERLGV 283

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           + M + +        + YA+ R + G  +    +++  +A + +       + F++    
Sbjct: 284 ALMALGIINECHRLCVAYAKTRTLWGKNIGQFQLIQLKLAKMEIARINVQNMVFQILERL 343

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
              K  S   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ + 
Sbjct: 344 KAGKLPSLAEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSL 397

Query: 441 SILLGSGNAMVLDVLNLL 458
            I  GS    V  +   L
Sbjct: 398 MIYAGSNEVQVTHIAKGL 415


>gi|197106484|ref|YP_002131861.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196479904|gb|ACG79432.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 383

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 125/365 (34%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           G      D+   +P     ++     G    +    +            A    +     
Sbjct: 21  GAYWRDLDRERAYPT--EFVQALTEAGFLSVLIPEEYGGSGL-GLKAAVAILEEVHRSGC 77

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G      + +   V    TP   + + PKI + E                  G+TE   
Sbjct: 78  NGAACHAQMYTMGTVLRHGTPAQKEAYLPKIATGELR------------LQAFGVTEPDA 125

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF----LVPRLLE 263
           GTD   I++  +K+ D         W   +  SD  ++L +   R         +  LL 
Sbjct: 126 GTDTTRISTFAKKVGDKYVVSGRKIWISRAEHSDLMVLLCRTTPRDQAKKPSDGMSVLLV 185

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
           D      NGL  + ++  + N +  T EL F +       L+G+       + D      
Sbjct: 186 DMRQAVGNGLTIRPVRTML-NHA--TTELFFEDLEVPAENLIGEEGKGFRYILDGMNAER 242

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A   +   R  +  A  YA+ R V G  + +   ++  +A   + +  A+ +  R A
Sbjct: 243 ILIAAECLGDARFFIDRASQYAKDRVVFGRPIGENQGVQFPLARAHVQMTGASLMVDRAA 302

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             F+  +    EA  A+++A    ++   M        ++  GG G+ EE  I R +RE+
Sbjct: 303 ELFEAGEPCGTEANMAKLVASEASWFAADM-------CLQTHGGFGFAEEYDIERKFRET 355

Query: 438 PANSI 442
               +
Sbjct: 356 RLYQV 360


>gi|194434555|ref|ZP_03066813.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae 1012]
 gi|194417208|gb|EDX33319.1| crotonobetainyl-CoA dehydrogenase [Shigella dysenteriae 1012]
 gi|332097999|gb|EGJ02972.1| acyl-CoA dehydrogenase, N-terminal domain protein [Shigella
           dysenteriae 155-74]
          Length = 380

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 126/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  IY      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPSAGSDVGSLKTTYTRRNGKIYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +    G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQHVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   + +  A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I+R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|296283653|ref|ZP_06861651.1| acyl-CoA dehydrogenase, putative [Citromicrobium bathyomarinum
           JL354]
          Length = 547

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 129/373 (34%), Gaps = 36/373 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++++    G+        +  +   +      +       + AG L + S  +  ++  
Sbjct: 195 EVVQQMADLGVFGVCIAEEYGGLGLGKTAMCLVSEELSRGWICAGSLGTRSEIAGELIGE 254

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP       P++      PT                TE   G+D+A++ ++ +  +DG
Sbjct: 255 NGTPEQKAALLPRLADGSILPTAV-------------FTEPDTGSDLASVATRARMQNDG 301

Query: 225 IY-CLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSP---------NGLCYQ 273
            +       W   +  +D   +L + +    G   +  LL   +           GL   
Sbjct: 302 SWQITGAKTWITHAARADLMTVLCRTDPDTPGYGGLSMLLAHKTRGTEDDPFPDEGLSGS 361

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMR 329
            ++  +G R      L F        G L      G  + M+      + +A  +V    
Sbjct: 362 EIE-VLGYRGMKEYALGFDGFAVAADGLLGGAQGRGFKQLMRTFESARIQTAARAVGVGW 420

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YA  R   G  LI  P +   +A +  ++  A  L++  A   D  K    E
Sbjct: 421 NAFDLALGYALERRQFGKPLIAFPRVADKLAMMVAELVMARELTYSAARHKDAGKRCDIE 480

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++A        ++A +     ++  GG+GY  E  I+R   ++   +I  G+   
Sbjct: 481 AGQAKLLAA-------RVAWSAADNGVQIHGGNGYALEYPISRVLCDARILNIFEGAAEI 533

Query: 450 MVLDVLNLLEKGT 462
               +   L  G 
Sbjct: 534 QAQVIGRGLLVGQ 546


>gi|126513505|gb|ABO15843.1| acyl-CoA dehydrogenase [Streptomyces vitaminophilus]
          Length = 379

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 123/360 (34%), Gaps = 32/360 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---SASMVAL 164
           +R    GL        +           R          E G +   S      A  V  
Sbjct: 41  KRLGDLGLLGPSVPTRYGGGGLGALDTARLVEALGRGCAETGLVFGASAHTFACAMPVVD 100

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T  V K   P + S E             +  G  +TE   G+D++ +    +++  G
Sbjct: 101 FGTEEVRKRVLPGLCSGE-------------LIAGNAITEAESGSDVSRLAVTARRVDGG 147

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                   +  + P+SD FI     + + G F V   + + S  G+      +K+G    
Sbjct: 148 WVLNGEKSFVSNGPVSDVFITYGTTDPKAGPFGVTGFVVERSAEGVFPSEPFDKMGLLQC 207

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHY 338
               + F++TF     D NV   P +   I  + +      +    V LA+      I +
Sbjct: 208 PAGSVRFADTFVP---DENVLGEPGQGGWIFQHSMGWERACLFAGYVGLADRVIESCIAH 264

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            R R   G  L +   +   IAD+ L + +A  L +R     D+        A A +   
Sbjct: 265 VRGRRQFGKRLSEFQAVSHRIADMKLRLESARLLLYRACWEMDQG-------APATLSIA 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++K    +   A   +A+   GG GY  +  I    R++  + I  G+ +     +   L
Sbjct: 318 LSKLAVSEGVLASALDAVRIFGGRGYQRDHGIEAALRDAVPSVIFSGTSDIQRELIAREL 377


>gi|121608179|ref|YP_995986.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121552819|gb|ABM56968.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 387

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 39/362 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQL 146
           R D+    P      R     G        ++          I  A L +       A L
Sbjct: 30  RRDREGGFPE--DFHRALADAGWLGIAMPEAYGGAGL----GIGEAALMMHTIAATGAGL 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  ++     V +  T      W P +                      G+TE  
Sbjct: 84  SGASAVHMNIFGLHPVVVFGTDAQKARWLPALIQGRDK-------------ACFGVTEPD 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLE 263
            G +   + ++  +  D         W  ++ +++  ++LA+        G   +     
Sbjct: 131 TGLNTLKLKTRAVRQGDHYLVHGQKLWISTAQVANKILLLARTTPVEECSGTQGLSLFYT 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D   + +  + ++ K+G +   + ++           L+G      G +        +  
Sbjct: 191 DMDRSTMEVREIE-KLGRKCVDSNQVFIDGLRIPEQDLVGQEGQGFGYILHGLNPERILI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +LA A  YA  R V G  +     ++  +A   +++ AA  +  + A  +
Sbjct: 250 ASEAVGLGRAALARATGYASEREVFGRPIGQNQGIQHPLAQSWMELEAAHLMVHKAAWLY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ +    EA  A+ +A    Y  C+ A       +   GG GY +E  + R+ RES   
Sbjct: 310 DQHRPCGAEANAAKYLAAEACYHACERA-------IFTHGGMGYAKEYHVERYLRESWIP 362

Query: 441 SI 442
            +
Sbjct: 363 RL 364


>gi|301057268|ref|ZP_07198394.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300448633|gb|EFK12272.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 551

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 142/393 (36%), Gaps = 35/393 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL-MSPSVTSASMV 162
             L  +    G+       S+  +    +  +    +   A +    + ++        +
Sbjct: 59  KELWEKLKEKGMFALTIPESYGGMGLSLSDYLSIIEVAARADMSLAVIPLAHHSIGLKGL 118

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  +     ++ P             P     +     LTE   G+D   I +  Q+  
Sbjct: 119 ILYGSANQKNEYLP-------------PAATGEMIFAFALTEPETGSDAKHIKTFAQRSR 165

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG  Y L+G K ++++   + A  + AQ++     F+    + +    G+   +   K+G
Sbjct: 166 DGSHYILNGTKTYITNGGYAGALTVFAQLDRSKPGFM-GAFVVETGSEGVEIGKDMPKMG 224

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----E 334
              ++TV + F +    +    N+   P +  KI +  L+   + ++     L      E
Sbjct: 225 LTLSSTVSIRFKDVKVPVK---NLIGKPGDGFKIAMAILNYGRLGLAAASNGLMAQSAKE 281

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            +  A RR   G  +    +++  I +  ++   + A++   A   ++            
Sbjct: 282 MLERAHRRRQFGVSISQFELVQEKILNAQVNAFLSKAITAFTAGMLEQDPLV-----RVA 336

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV--- 451
           I +   K +    A  V+ EA++  GGSGY++     +  R+    ++  G+        
Sbjct: 337 IESSHAKLFSTTRAWDVLYEALQIHGGSGYLKTLPYEKRLRDFRVTTVFEGTTEIHSIYP 396

Query: 452 -LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483
            L ++  + K +  +   ++ + +      K++
Sbjct: 397 PLFMIRSMMKASKGYGGRWALILKSAFRLSKRL 429


>gi|194290190|ref|YP_002006097.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193224025|emb|CAQ70034.1| putative Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 388

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 120/359 (33%), Gaps = 31/359 (8%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL- 151
           WD+++    + H   +     G        +F              +    +        
Sbjct: 28  WDRLDKSGTYPHEFYKTLCEGGWLGVAMPEAFGGAGLGILEAALVMQTISQSGAGMTGAS 87

Query: 152 -MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +V   + V +  T      + P             P+         G+TE   G D
Sbjct: 88  AVHMNVFGLNPVVVFGTDAQKGRFLP-------------PLIAGQEKACFGVTEPDAGLD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS 266
              + +  +K+  G        W  ++ ++D  ++LA+       +     +        
Sbjct: 135 TTKLKTFARKVPGGYSVSGRKIWISTAQVADRMLLLARTTPLESVKKSTEGLSLFYTKVD 194

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
            + +  + + +K+G  +  T  L   + F      +G+       +        +  A  
Sbjct: 195 RSKIEIREI-DKMGRAAVDTNMLFIDDLFIPDEDRIGEEGKGFEYILHGLNPERILIAAE 253

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +LA A  YA+ R V G  +     ++  +A   + + +A  +  + A  +D  
Sbjct: 254 AIGLGRAALAIATQYAKERVVFGRPIGMNQGVQHPLAQAWMQLESANLMMLKAAARYDAG 313

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +S   EA  A+ +A    +  C+ A       +  +GG GY  E  + R  RES    I
Sbjct: 314 QSCGAEANAAKYLAAEAGHNACQTA-------ILTLGGMGYSREYRVERLLRESYIPRI 365


>gi|115402751|ref|XP_001217452.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114189298|gb|EAU30998.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 422

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/365 (21%), Positives = 134/365 (36%), Gaps = 34/365 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +      V   A  +    +  +       +   S  + + + 
Sbjct: 75  RRILEEMGELGLLGASINGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLAMTAIH 134

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS--QGQKI 221
              T  + +   P +              +  +A   GLTE   G+D  A+ +  +    
Sbjct: 135 EFGTEELKERLLPGL-------------AQGKLAGCFGLTEPNHGSDPGAMETVARAHPS 181

Query: 222 SDGIYCLSG-HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G+Y LSG   W  +SP++D  ++ A++E  G++  F+V R   D  P G L    +KN
Sbjct: 182 KPGVYLLSGAKTWITNSPIADVLVVWAKLESTGKIRGFVVER---DQCPAGTLETPAIKN 238

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K   R++ T  ++          +  D+   TGP   +     L  A  ++  +   LA 
Sbjct: 239 KTALRASITGMIQLDECPVPVENMFPDVEGLTGPFTCL-NSARLGIAFGAMGALEDCLAR 297

Query: 335 AIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A  YA  R    G  L    ++++ +AD A D A  T  + ++A   D  KS  E     
Sbjct: 298 AREYALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDAGKSTPE----- 352

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K   C  A        E  GG+   +E  IARH           G  +   L 
Sbjct: 353 --MISMVKRQNCDRALVNSRILQEVFGGNATSDEYHIARHAANLFVVQTYEGQSDIHALI 410

Query: 454 VLNLL 458
           +   +
Sbjct: 411 LGRAI 415


>gi|229192913|ref|ZP_04319870.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228590523|gb|EEK48385.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876]
          Length = 395

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 26  PYANSWEIEQGIPS--DIIKTCAKNGYLGGTIPAEYGGLEWDYVTYGLFTEAIARGSVSL 83

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 84  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 131 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPV----ACLVPKDSA 186

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 187 GVNVTHIRDMLGFKAAYLAEIEFNNVGIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 243

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A+  LS     + +
Sbjct: 244 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLSLEACKAKN 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 304 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 357

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 358 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 385


>gi|146276020|ref|YP_001166180.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322711|gb|ABP64654.1| acyl-CoA dehydrogenase domain protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 528

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 91/449 (20%), Positives = 155/449 (34%), Gaps = 50/449 (11%)

Query: 41  SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100
            +L A  A      H  L       L+          +    +L A      R+   E  
Sbjct: 104 RVLEAECAALVDADHAGLRAQVAEALADGQWPSDHFDDG---ELDAIRDQFRRFTDAEIL 160

Query: 101 PAWHA--LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM---------AQLEAG 149
           P  H   L    I DG   ++ +     V   + H        +M           + AG
Sbjct: 161 PNAHEWHLANALIPDGTVRAMAELGTFGVCIPEEHGGFGLGKLVMCVVTEELSRGWIGAG 220

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L + S  +  ++ L  T      W P I S E  PT                TE   G+
Sbjct: 221 SLGTRSEIAGELIVLGGTETQKARWLPAIASGEVLPTAV-------------FTEPDTGS 267

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           D+ ++ S+ ++  DG + + G K +++    SD   ML +      G   +  LL     
Sbjct: 268 DLGSLQSRARRGEDGGWIIDGAKTWITHASRSDLMTMLVRTVPDARGYAGLSMLLVPKPR 327

Query: 268 ---------NGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKI 314
                     G+    ++  +G R      L+F          L G+       +     
Sbjct: 328 GTQDDPFPAEGMSGSEIE-VLGYRGMREYALQFDGMRAPGDALLGGEEGQGFKQLMRTFE 386

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + +A  +V   R +L   + YA  R   G  ++  P +   +A  A+DI  A  L++
Sbjct: 387 GARIQTAARAVGVARRALELGLDYALSRKQFGKAIVGFPRVADKLAMGAVDIVMARELTY 446

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A + D  K    EA  A+++A        + A +    A++  GG+GY  E  I+R  
Sbjct: 447 AAARAKDSGKRCDIEAGMAKLLAA-------RAAWSNADAALQIHGGNGYALEYEISRVL 499

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTN 463
            ++   +I  G+       +   L +G N
Sbjct: 500 CDARILNIFEGAAEIQAQVIARGLMEGRN 528


>gi|311105970|ref|YP_003978823.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760659|gb|ADP16108.1| acyl-CoA dehydrogenase 1 [Achromobacter xylosoxidans A8]
          Length = 388

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 118/384 (30%), Gaps = 44/384 (11%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             +AR+                  D+    P    L      DG       + +      
Sbjct: 14  DAVARICERYP------DEYWLERDREGGFPE--PLHADLARDGWLGIAMPQEYGGAGLG 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTTPRVHKDWAPKIFSREYDP 185
                 AA +              S    ++  L       +    + W           
Sbjct: 66  ---MTEAALMMQTIAASGAGFTGASAVHMNIFGLNPVVVFGSDEQRRRWLE--------- 113

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P+          +TE   G D   ++++  +  D         W  ++ ++   ++
Sbjct: 114 ----PLIAGREKACFAVTEPDAGLDTTKLSTRAVRQGDEYVVHGRKIWISTAQVAHKMLL 169

Query: 246 LAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
           LA+             +     D   N +  + ++ K+G ++  +  L        +   
Sbjct: 170 LARTTPLSEVAKPTQGLSLFYTDLDRNKVEVREIE-KMGRKAVDSNMLFIDGLRIPVADR 228

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       +        +  A  +V   R +L  A+ YA  R V G  +     ++  
Sbjct: 229 IGEEGRGFEYILHGLNPERILIAAEAVGIGRAALDRAVKYAGERTVFGRPIGQNQGIQHP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A   + + AA  + F+ A+ +D  K     A  A+ +A    Y  C+ A       +  
Sbjct: 289 LAQAWMQLEAADLMVFKAASLYDAGKPCGPYANSAKYLAAEAGYNACQTA-------VMT 341

Query: 419 IGGSGYIEERSIARHYRESPANSI 442
           +GG GY +E  + R  RES    I
Sbjct: 342 LGGMGYAKEYHVERLLRESFIPRI 365


>gi|328543478|ref|YP_004303587.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413222|gb|ADZ70285.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 387

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/406 (19%), Positives = 137/406 (33%), Gaps = 31/406 (7%)

Query: 65  VLSCTAQELARMANYN---TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           +   +        + +     +L A+       D  +   A   L+ R    G       
Sbjct: 1   MADRSFLAWPFFDDRHRALAAELDAWCAANLPVDHTDTDAACRDLVARLGAAGFLRHSGA 60

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
              E +  +    IR           A    +        V+L  TP     W  +    
Sbjct: 61  EEGERLDVRSLCLIR--ETLARHDGLADFAFAMQGLGMGAVSLFGTPEQRA-WLAR---- 113

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240
                     +      G  LTE   G+D+A I +Q +  + G + LSG K ++S+  ++
Sbjct: 114 ---------TRTGRAISGFALTEPGSGSDVANIATQARPRTGGGWVLSGDKTYISNGGIA 164

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
           D +++ A+     G   +   L      GL        I         L F +   + G 
Sbjct: 165 DVYVVFARTGEAPGARGLSAFLLPADAPGLAVVERIEVIAPH--PLAHLRFDDIVLSDGA 222

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G           +  +        ++   R +L EA+     R + G  L D  +++ 
Sbjct: 223 LIGRHGEGFRIAMSVLDVFRATVGAAALGFARRALDEALARVESRRLFGAPLSDLQMVQG 282

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IAD+AL + A+  L +R A + D        A      A + K    + A  VI  A++
Sbjct: 283 HIADMALAVDASALLVYRAAWTKDMG------AERVSREAAMAKLHATEAAQTVIDTALQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             GG G  +  ++   YRE  A  I  G+ +   + +      G  
Sbjct: 337 LHGGDGVRKGFAVESLYREIRALRIYEGASDVQKIVIARATIAGGK 382


>gi|332853286|ref|XP_003316193.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Pan
           troglodytes]
          Length = 428

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 120/320 (37%), Gaps = 34/320 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 229 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 281

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G       ++++ + ++ +
Sbjct: 282 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVSQALNQMIQKKLENMLI 341

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           +I  +     +     D+ K+       A  M  + K   C  A  +  +A + +GG+G 
Sbjct: 342 EITLSLHACLQFGRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNGI 394

Query: 425 IEERSIARHYRESPANSILL 444
            +E  + RH     A +   
Sbjct: 395 SDEYHVIRHAMNLEAVNTYE 414


>gi|297616646|ref|YP_003701805.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144483|gb|ADI01240.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 379

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 121/358 (33%), Gaps = 23/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++       L       ++          + A             ++S        + 
Sbjct: 39  KEVIEGLAELDLFGMPMPEAYGGAGAGYDTYVVALEQIARISCGPAMIISAHTLGLGAIN 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + PK    E+                   TE   G+D   IT+   +  +
Sbjct: 99  NFGTEEQKQRYMPKCCRGEH-------------IASFAFTEPGTGSDPKQITTTAVRDGN 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
               ++G K F+S+      ++L   +   G   +   + +    G    +   K+G   
Sbjct: 146 HF-VINGTKRFISNGTYPGPVVLFARDQENGK--ITAFIVEKFCEGYSVSKPWEKVGWHG 202

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              V++   N       +LG+       ++       +    +++  +  +  EA+ YA+
Sbjct: 203 GDLVDIYLKNVRIPAENVLGERGYGYPILQYGIAFGKIGMNAIALGTLLAAYEEAVTYAK 262

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            +   G  +     ++  IADIA+   A+  +++RL    ++ K  ++ A      A + 
Sbjct: 263 EKTHRGEPIAKFQTIQLRIADIAMKYEASRWVAYRLGCLANQTKDYADFA----REAAMA 318

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K    + A +    A++  G  G + +  I+R YR++     + G  +   + V   +
Sbjct: 319 KVIVAENAFSATRIALDIHGSYGLMTDYKISRLYRDAVMGPQIEGVIDMQKIIVAGSI 376


>gi|284997316|ref|YP_003419083.1| hypothetical protein LD85_1024 [Sulfolobus islandicus L.D.8.5]
 gi|284445211|gb|ADB86713.1| hypothetical protein LD85_1024 [Sulfolobus islandicus L.D.8.5]
          Length = 515

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 116/376 (30%), Gaps = 32/376 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G   + +  +     L ++ +  G    +  R +  +          +  Y+      G
Sbjct: 27  RGRAEEALWKNEYPMDLHKKIVEKGWWGVVIPREYGGMGGDYTSVAIISE-YISNLGSVG 85

Query: 150 HLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            + + ++      +             PK                      + +TE   G
Sbjct: 86  GVFATTLFGGLYQILRFGNEEQKAKSLPKF--------------AKGTVGAVCITEPYVG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           +D A   +   K  D  Y ++G K F+++  M+D +++ A  +     R     +   + 
Sbjct: 132 SDAAGAETIAIKEGD-KYIINGKKRFITNAGMADIYVVYAVTDPSSKARKSYSHLSAFIL 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDS 320
           +    G   +++    G        L+  +    +     +       +        L  
Sbjct: 191 EKGMKGFHVEKINELQGFDGLLNGYLDLDHVEVPVENRLSEEGQGWWILVSGLNFERLVI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V  +R        Y RRR        +    +  +ADI +D      L++  A   
Sbjct: 251 GAQQVGLLRELARYVAFYTRRRVQFNQPTFEYEANQYKLADIIIDYRITRLLTYYTAYLM 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+      +       A + K +  +       +A++ +GG G+ +   +   YR +   
Sbjct: 311 DQGVDPVID-------ANVLKAFSTEAVEKASRDAIQAMGGDGWTKFYPVEAIYRNAKLG 363

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   +   ++ 
Sbjct: 364 TIGGGTSEVLKRFIVR 379


>gi|254744474|ref|ZP_05202154.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B]
          Length = 176

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 16/186 (8%)

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-- 335
           +G   + TV+L F +         N+     +  K+ +  LD   + +    + +AEA  
Sbjct: 1   MGLLGSRTVQLTFEDMKVPA---ENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAAL 57

Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
              I YA+ R   G  + +Q  +   +AD+A  + AA  L +R A+   +     +E   
Sbjct: 58  ACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKE--- 114

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
               A I K +  K A  V  EA++  GG GY ++  + R +R++    I  G+     L
Sbjct: 115 ----ASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKL 170

Query: 453 DVLNLL 458
            +   L
Sbjct: 171 VISRAL 176


>gi|91975092|ref|YP_567751.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91681548|gb|ABE37850.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 388

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 117/364 (32%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQ 145
                R D+    P  H   +     G         +              R      A 
Sbjct: 25  DAYWLRKDREGGFP--HDFHKALADAGWLGICVPEDYGGSGLGITEAAIMMRTISESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V   + V +  T    K   P             PM +        +TE 
Sbjct: 83  MSGASAVHINVFGLNPVVVFGTEEQRKRMLP-------------PMVEGREKACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ ++   ++LA+       +     +   
Sbjct: 130 NTGLNTTQLKTRAVRNGDRYIVNGQKVWISTAQVAHKILLLARTTPLEEVKSPTHGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
             D     +    ++ K+G +   + EL F +    L   +G+       + +      +
Sbjct: 190 YTDFDRTKIQVHEIE-KMGRKIVDSNELFFEDFEIPLEDRIGEEGRGFQYILEGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V   +++ + A  YA+ R V    +     ++  +A   +++ AA  +    A 
Sbjct: 249 LIAAEAVGLGKLASSRASEYAKTRIVFNRPIGQNQAIQHPLAKNWVELEAAWLMVMSAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+    +  A  A+ +A    +  C+       +A+   GG GY +E  + R+ RE  
Sbjct: 309 QYDKGMPCAAAANAAKYLAGEAGFQACE-------QAVMTHGGFGYAKEYHVERYLREVL 361

Query: 439 ANSI 442
              I
Sbjct: 362 IPRI 365


>gi|163839654|ref|YP_001624059.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162953130|gb|ABY22645.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 393

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 121/393 (30%), Gaps = 36/393 (9%)

Query: 72  ELARMANYNTPQLHAYGPGGERW-DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
           ELA+             P   RW D   F      L+      G+     D         
Sbjct: 22  ELAQRDKVREFTDRRIKPNIARWFDNAHFP---LELVPELGALGVLGMHLDGYGCAGASA 78

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             + + A  +          +      + + +    +    + +               P
Sbjct: 79  VEYGLTAMEIEAGDSGIRTFVSVQGSLAMTAIHKWGSEAQKEKYL-------------QP 125

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           M +  +     LTE   G+D  A+ +   + ++G       +W   + ++D  I+ A V 
Sbjct: 126 MARGELIGCFALTEPEAGSDPGAMRTTAVRTAEGWRLNGAKRWIGLASIADVAIIWAAVP 185

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                  V   L   S  G   + +  K+  R++   +++F+         L ++ G   
Sbjct: 186 EE----GVRGFLVPTSTPGFSAEPITGKLSMRASIQCDVQFNEVELPEDAILPLAKGLR- 240

Query: 311 DMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
                  L+ A   +        R +   A+ YA  R   G  L    + +  + D+ L+
Sbjct: 241 --GPFSCLNEARYGIMWGSMGAARDAFEVALAYAAERQPFGSPLGSYQLTQAKLVDMMLE 298

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +     L+       D    R E+         + K    + A  +  +A   +GG+G  
Sbjct: 299 LQKGQLLALHTGRLKDAGTLRPEQ-------ISVGKLNNVREALEICHQARSILGGNGIT 351

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + S  RH     +     G+     L +   L
Sbjct: 352 LDYSPLRHANNLESVRTYEGTDEVHTLILGQYL 384


>gi|221120142|ref|XP_002164021.1| PREDICTED: similar to acyl-coenzyme A dehydrogenase, C-4 to C-12
           straight chain, partial [Hydra magnipapillata]
          Length = 280

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 86/241 (35%), Gaps = 22/241 (9%)

Query: 243 FIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           F +LA+ +              + D    G+   + +  +G R + T  + F +      
Sbjct: 1   FFVLARSDPDPNAKPGKAFTGFIVDADSPGITLGKKEINLGQRCSDTRGVNFEDVRVPKS 60

Query: 300 GDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             L  V  G    M          A  +V   + +L EA  Y+  R   G  + +   ++
Sbjct: 61  NVLGKVGEGFKYAMGAFDKTRPGVASAAVGLAQRALDEATKYSTERKTFGTQISNHQAIQ 120

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A  +  A  +  R A   D+ +  +         A I K +   +A    ++ +
Sbjct: 121 FMLADMASGVELARLMVRRAAWELDQGRKNT-------YYASIAKSFASDVANKNASDCV 173

Query: 417 ECIGGSGYIEERSIARHYRESPANS----ILLGSGNA-----MVLDVLNLLEKGTNLFEQ 467
           +  GG+GY  E    +  R++        I+    N       VL V+    K   L E+
Sbjct: 174 QIFGGNGYNSEYPAEKLMRDAKIFQRLIKIIADDNNVDEKIFHVLHVIMSKTKSNQLIEE 233

Query: 468 L 468
           +
Sbjct: 234 I 234


>gi|227829714|ref|YP_002831493.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|229578621|ref|YP_002837019.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|229582597|ref|YP_002840996.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|284175073|ref|ZP_06389042.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus
           98/2]
 gi|227456161|gb|ACP34848.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           L.S.2.15]
 gi|228009335|gb|ACP45097.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228013313|gb|ACP49074.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus
           Y.N.15.51]
          Length = 514

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 116/376 (30%), Gaps = 32/376 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G   + +  +     L ++ +  G    +  R +  +          +  Y+      G
Sbjct: 26  RGRAEEALWKNEYPMDLHKKIVEKGWWGVVIPREYGGMGGDYTSVAIISE-YISNLGSVG 84

Query: 150 HLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            + + ++      +             PK                      + +TE   G
Sbjct: 85  GVFATTLFGGLYQILRFGNEEQKAKSLPKF--------------AKGTVGAVCITEPYVG 130

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           +D A   +   K  D  Y ++G K F+++  M+D +++ A  +     R     +   + 
Sbjct: 131 SDAAGAETIAIKEGD-KYIINGKKRFITNAGMADIYVVYAVTDPSSKARKSYSHLSAFIL 189

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDS 320
           +    G   +++    G        L+  +    +     +       +        L  
Sbjct: 190 EKGMKGFHVEKINELQGFDGLLNGYLDLDHVEVPVENRLSEEGQGWWILVSGLNFERLVI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               V  +R        Y RRR        +    +  +ADI +D      L++  A   
Sbjct: 250 GAQQVGLLRELARYVAFYTRRRVQFNQPTFEYEANQYKLADIIIDYRITRLLTYYTAYLM 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+      +       A + K +  +       +A++ +GG G+ +   +   YR +   
Sbjct: 310 DQGVDPVID-------ANVLKAFSTEAVEKASRDAIQAMGGDGWTKFYPVEAIYRNAKLG 362

Query: 441 SILLGSGNAMVLDVLN 456
           +I  G+   +   ++ 
Sbjct: 363 TIGGGTSEVLKRFIVR 378


>gi|301063270|ref|ZP_07203816.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300442623|gb|EFK06842.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 413

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 123/380 (32%), Gaps = 31/380 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
                LL+++   G      +  F                 ++A+      M   +   S
Sbjct: 49  EDHQRLLQKTRELGFWGLEVEEKFGGQGLG-----------MLAKTLVVEEMCKCLVGFS 97

Query: 161 MVALMTTPRVHK-DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             A    P      +     S         P   + +   +  TE   G+D++ + ++  
Sbjct: 98  PHAFTLPPDAPNLYYLNDCCSESQREKYFTPYCNSEIDSAMACTEPGAGSDVSGLKTKAV 157

Query: 220 KISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQR 274
           +  +G + ++G K F S    D     FI++A  +            L D    G+   R
Sbjct: 158 RK-NGKWVINGTKTFTS--KCDYPKVFFILIAVTDPEASSKNRFTAFLIDREHPGVRVGR 214

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               IG  +  T +L   +       +LG+   +  P+++   +  ++ A          
Sbjct: 215 ETPVIG--AMPTWDLILEDVEVSDDAVLGEAGKAFIPLQNRFGVRRIELASRCTGMAERL 272

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +   I  A  R   G  L ++ V++  IAD  +++ A     +  A   D+         
Sbjct: 273 IQMMIDQANNRVTFGKPLAERGVVQNWIADSTMELEAVRWPLYYAAWKSDQGYKD----- 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             RI     K    +M   V   A++  GG G  +E  I    R      IL G      
Sbjct: 328 -LRIEGASIKVAATEMLTRVADRAIQVHGGLGVSKELGIEHVARMVRIWRILEGPSEIHR 386

Query: 452 LDVLNLLEKGTNLFEQLFST 471
             +   + +G  +++     
Sbjct: 387 WLISRQILRGKKVYDPFIVE 406


>gi|222055514|ref|YP_002537876.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
 gi|221564803|gb|ACM20775.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32]
          Length = 410

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 124/396 (31%), Gaps = 35/396 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH---KIRAAR 139
           +L  +   G    + +       LL+++   G      D  F             +    
Sbjct: 35  ELSLWTQPGHLIPEEDH----KRLLQKTKDLGFWGLEVDEEFGGQGLGMLAKTLVVEELS 90

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L+     G  + P   +   +     PR  + +               P     V   
Sbjct: 91  KSLVGFSNHGFTLPPDAPNLYYLHECCGPRQREKY-------------FVPYCNGEVDSA 137

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV-GCF 256
           +  TE   G+D++ + ++  K  +  + ++G K F+S    D   FI++A  +       
Sbjct: 138 MACTEPGAGSDVSGLKTKAVKKGN-KWVINGTKTFISKCDYDNVFFIVIAVTDPSAASKD 196

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMK 313
                L D    G+   +    IG     T +L   +       +LGD+  +  P+++  
Sbjct: 197 RFTAFLIDREHPGVRIGKEIPVIG--PMPTWDLILEDVEVDDDAILGDVGKAFIPLQNRF 254

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  ++ A          +   I  A  R   G  L D+  ++  IAD  +++     + 
Sbjct: 255 GVRRIELASSCTGMAERLIQMMIDQANTRVTFGQPLADRGTIQNWIADSTMELEQVRWML 314

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D+           RI     K    +M   V   A++  GG G   E  I   
Sbjct: 315 YYAAWKSDQGHKD------LRIEGASVKVAATEMLTRVADRAIQIHGGVGVSHELGIEYV 368

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            R      IL G        +   L K    +    
Sbjct: 369 ARHVRIWRILEGPSEIHRWLIARQLLKEKKPYNPFI 404


>gi|302547271|ref|ZP_07299613.1| acyl-coenzyme A oxidase 4 [Streptomyces hygroscopicus ATCC 53653]
 gi|302464889|gb|EFL27982.1| acyl-coenzyme A oxidase 4 [Streptomyces himastatinicus ATCC 53653]
          Length = 405

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 120/370 (32%), Gaps = 31/370 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDR--SFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           W + EF      L+      GL    ++   +  P V      + A          +   
Sbjct: 55  WARGEFP---RELIALFRDSGLAGLPYEGYGAHRPAVSNLLSGMLALETARTDASVSTFF 111

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              +  +   +           W P              M          +TE  GG+D+
Sbjct: 112 GVHNGLAMYSIHAGGDQEQRDRWLP-------------AMAAMDKIGAFAMTEPLGGSDV 158

Query: 212 AA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           A  + +  ++           KW  ++  +D  ++ A+             + +    G 
Sbjct: 159 AGGMRTTARREGGTWVLNGAKKWIGNATFADYVVVWARDVDDNHVKG---FVVEKGTPGF 215

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGM 328
              +++NK+  R     E+  ++        L       +  +IL       A  ++  M
Sbjct: 216 SPVKIENKLAFRIVENAEITLTDVRVPEADRLQNIGSFRDVAEILRATRGGVAWQALGVM 275

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +   A+ YAR RH  G  +    +++  +     +I A+  +  +LA   D      E
Sbjct: 276 VGAYELALDYARERHQFGRPIGGFQLVQDLLVKSLGNITASWGMLVQLARMQDAGIFHDE 335

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +A A       K +       V+A + E  GG+G + +  IAR + ++ A     G+  
Sbjct: 336 HSALA-------KAFVTARMREVVAWSREVFGGNGILLDHDIARFFADAEAIYSFEGTRE 388

Query: 449 AMVLDVLNLL 458
              L V   +
Sbjct: 389 MNTLIVGKSI 398


>gi|108800709|ref|YP_640906.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869848|ref|YP_939800.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436332|ref|YP_001072023.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771128|gb|ABG09850.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695937|gb|ABL93010.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126236132|gb|ABN99532.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 404

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 117/352 (33%), Gaps = 30/352 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVT 157
           H             G         +        +A  +  A       + A   +  S+ 
Sbjct: 51  HEFPTEFYDAIAGGGWLGMTIPEEYGGHGLGITEATLLAEAVARSGGGMNAASSIHMSIF 110

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V    +  +     P+I S +               +  G+TE   G D + IT+ 
Sbjct: 111 GMHPVVKHGSDELKARTLPRIASGDLH-------------VCFGVTEPGAGLDTSRITTF 157

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQ 273
            ++  D         W   +  S+  ++L +             +   + D     +  +
Sbjct: 158 AKRDGDSYVVNGRKVWISKALESEKILLLTRTTPYDEVTKKTDGMTLFMTDLDRAHVDIR 217

Query: 274 RLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +  K+G  + ++ EL   +    +   +G+       + D      +  A  ++   R+
Sbjct: 218 PIA-KMGRNAVSSNELFIDDLRIPVEDRVGEEGRGFFYILDGLNPERMLIAAEALGIGRI 276

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L +A+ YA  RHV    +     ++  +AD    + AA  +  +    +D  KS   EA
Sbjct: 277 ALDKAVKYANDRHVFDRPIGMNQGIQFPLADSLARLDAAELMLRKATWLYDNGKSCGREA 336

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             A+ +       C          A++  GG GY EE  +AR +RE+    I
Sbjct: 337 NTAKYL-------CADAGFTAADRALQTHGGMGYAEEYHVARFFREARLMKI 381


>gi|27382356|ref|NP_773885.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27355527|dbj|BAC52510.1| blr7245 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 125/362 (34%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 30  RKLDREMAYP--KAFVDALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGG 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   V           + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTVLRHGNAEQKAKYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
           +++ +  +K  +  Y ++G K + S +  SD  ++LA+   +         +   + D  
Sbjct: 135 SSLKTFARKEGNDSYIVNGQKIWTSRAEHSDLMVLLARTTPKEQVKKRTDGLSVFIVDMR 194

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F++       L+G+       +        +  
Sbjct: 195 EAKNNGLEIRPIRTMM-NHA--TTEVFFTDMKVPAENLIGEEGKGFRYILSGMNAERILI 251

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   +  +A+A +YA+ R V G  +     ++  IA     + AA  +       +
Sbjct: 252 AAECVGDAKWFIAKATNYAKERSVFGRPIGQNQGIQFPIAKAYASMRAAELMVKEATRKY 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A    +             ++  GG G+ EE  + R +RE+   
Sbjct: 312 EAGLDCGAEANMAKMLAADASW-------EAANACIQTHGGFGFAEEYDVERKFRETRLY 364

Query: 441 SI 442
            +
Sbjct: 365 QV 366


>gi|126725918|ref|ZP_01741760.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
 gi|126705122|gb|EBA04213.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150]
          Length = 401

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 120/350 (34%), Gaps = 35/350 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A +      G    +    +       +    A    +  Q          + +   + 
Sbjct: 53  QAFIDALTAAGWLSVLIPEEYGGAGLPLS-AAAAILEEMQMQGCNSGACHAQMYTMGTLL 111

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PKI S E                  G+TE   GTD  A+ +      D
Sbjct: 112 RHGSDDQKQTYLPKIASGELR------------LQAFGVTEPTSGTDTGALKTTAVLEGD 159

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLED---GSPNGLCYQRL 275
             Y ++G K + S +  SD  ++LA+     EG      +  +L D      NGL  + +
Sbjct: 160 E-YVINGQKIWTSRAEHSDLMLLLARTSPRREGMKKTHGLSVILVDMRKAVGNGLTIRPI 218

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           +  + N +  T E+ F N       L+G+       +        +  A   V   +   
Sbjct: 219 RTMM-NHA--TTEVFFDNLRVPAENLIGEEGKGFKYILTGMNAERILIAAECVGDAKWFT 275

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +++ YA+ R V    +     ++  IA    ++ AA  +       ++  ++   EA  
Sbjct: 276 QKSVTYAKDRRVFDRAIGQNQGVQFPIAKAYTNMRAAELMVKEALRLYEAGENPGAEANM 335

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A+++A          +       ++  GG G+ EE  I R +RE+    +
Sbjct: 336 AKMLAA-------DASFEAANACVQTHGGFGFAEEYDIERKFRETRLYQV 378


>gi|326410953|gb|ADZ68017.1| acyl-CoA dehydrogenase [Brucella melitensis M28]
 gi|326554244|gb|ADZ88883.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90]
          Length = 386

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 28  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 85  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 133 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 191

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 192 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 249 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 309 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 361

Query: 441 SI 442
            +
Sbjct: 362 QV 363


>gi|225629269|ref|ZP_03787302.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|261220624|ref|ZP_05934905.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|265986335|ref|ZP_06098892.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
 gi|265996029|ref|ZP_06108586.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|225615765|gb|EEH12814.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo]
 gi|260919208|gb|EEX85861.1| acyl-CoA dehydrogenase [Brucella ceti B1/94]
 gi|262550326|gb|EEZ06487.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1]
 gi|264658532|gb|EEZ28793.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1]
          Length = 395

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 37  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 93

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 94  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 141

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 142 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 200

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 201 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 258 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 318 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 370

Query: 441 SI 442
            +
Sbjct: 371 QV 372


>gi|16759066|ref|NP_454683.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140616|ref|NP_803958.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213163020|ref|ZP_03348730.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213427514|ref|ZP_03360264.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213580150|ref|ZP_03361976.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213865066|ref|ZP_03387185.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289826202|ref|ZP_06545314.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|21542008|sp|Q8Z9L2|CAIA_SALTI RecName: Full=Crotonobetainyl-CoA dehydrogenase; AltName:
           Full=Crotonobetainyl-CoA reductase
 gi|25284703|pir||AC0511 probable carnitine operon oxidoreductase CaiA STY0083 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16501356|emb|CAD01227.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136240|gb|AAO67807.1| probable carnitine operon oxidoreductase CaiA [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 380

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 125/351 (35%), Gaps = 16/351 (4%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
           +    ++ D   + ++  + H    A    +A +     M      A    L   P    
Sbjct: 40  ERFVKALADMGIDSLLIPEEHGGLEAGFVTVAAV----WMELGRLGAPTYVLYQLPGGFN 95

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  +  ++E      A            +TE   G+D+ ++ +   + +  +Y      
Sbjct: 96  TFL-REGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKC 154

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +  SS  +   +++A+        +      D S  G+   +L+ K+G R ++  E+ F 
Sbjct: 155 FITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKLE-KLGLRMDSCCEITFD 213

Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       + G        V++         A+ +      +  +A  YA +R   G  +
Sbjct: 214 DVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCTFEDAARYANQRVQFGEAI 273

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   A +A+ + +   +    A   D     S +AA         KY+C   A 
Sbjct: 274 GRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM-------CKYFCANAAF 326

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            V+  AM+ +GG G      I R +R+   + +  GS    +L +   + K
Sbjct: 327 EVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|237816918|ref|ZP_04595910.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260756446|ref|ZP_05868794.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260759878|ref|ZP_05872226.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260763116|ref|ZP_05875448.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882268|ref|ZP_05893882.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|261216245|ref|ZP_05930526.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
 gi|237787731|gb|EEP61947.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A]
 gi|260670196|gb|EEX57136.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260673537|gb|EEX60358.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676554|gb|EEX63375.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870]
 gi|260871796|gb|EEX78865.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68]
 gi|260917852|gb|EEX84713.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya]
          Length = 395

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 37  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 93

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 94  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 141

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 142 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 200

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 201 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPISNLIGEEGKGFRYILSGMNAERILI 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 258 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 318 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 370

Query: 441 SI 442
            +
Sbjct: 371 QV 372


>gi|27381902|ref|NP_773431.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27355071|dbj|BAC52056.1| bll6791 [Bradyrhizobium japonicum USDA 110]
          Length = 388

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 113/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASM 161
           H   +     G        ++              R      A +     +  +V   + 
Sbjct: 39  HDFHKALADAGWLGICVPEAYGGSGLGITEAAIMMRTIAESGAGMSGASAVHINVFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  T    K   P             PM +        +TE   G +   + ++    
Sbjct: 99  VVVFGTEEQRKRMLP-------------PMVEGREKACFAVTEPNTGLNTTQLKTRAVAK 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +D         W  ++ ++   ++LA+       R     +     D     +    ++ 
Sbjct: 146 NDRYIVNGQKVWISTAQVAHKILLLARTTPLEEVRSPTHGLSLFYTDFDRKKIKVHEIE- 204

Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +   + EL F +        +G+       + +      +  A  +V   +++LA 
Sbjct: 205 KMGRKVVDSNELFFEDFEIPMEDRIGEEGKGFQYILEGMNPERILIAAEAVGLGKLALAR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA+ R V    +     ++  +A   +++ AA  +  + A  +D+       A  A+
Sbjct: 265 ATEYAKTRVVFNRPIGKNQGIQHPLAVNWVELEAAWLMVMQAAWQYDKGLPCGAGANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             A    Y  C+       +A+   GG GY +E  + R+ RE     I
Sbjct: 325 YFAGEAGYHACE-------QAVMTHGGFGYAKEFHVERYLREVLIPRI 365


>gi|239611235|gb|EEQ88222.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327348761|gb|EGE77618.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 435

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 110/314 (35%), Gaps = 22/314 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      +          ++ PKI              +  +   LG+TE   G
Sbjct: 118 WGLFGGNNIGCPPILDFGNEAQKLEYLPKI-------------SRGEIRFCLGITEPDAG 164

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +   +  +        KW +++ +   +   A   G  G   +  L+   +  
Sbjct: 165 SDVANIRTTAIRRGNKYIVNGAKKW-ITNGIWADYCTAAVRTGGEGRRGISLLIIPLAAK 223

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  + ++N  G  ++ +  +EF +       L+G  N     +        L  AI  +
Sbjct: 224 GVTRRIMENS-GVNASGSTFIEFDDVEVPVENLIGTENDGFRYIMSNFNPERLGLAISCI 282

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV + +A +YA  R   G  LI   +++   + +   I    A   +LA +   A  
Sbjct: 283 RLSRVCVEDAYNYATNRETFGQPLITNQIIRAKFSKLGRLIEPCQAFLEQLAYTIHVATK 342

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
             +E      M  + K    +    V  EA + +GG+GY        I +  R+     +
Sbjct: 343 NGQEVN-VGGMTALLKVMSTRCLEKVCREAQQVLGGAGYNKSGRGARIEQISRDVRVYVV 401

Query: 443 LLGSGNAMVLDVLN 456
             GS   +    + 
Sbjct: 402 GGGSEEILSDLAVR 415


>gi|184186479|gb|ACC69031.1| acyl-CoA-dehydrogenase domain protein [Variovorax paradoxus]
          Length = 399

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 128/384 (33%), Gaps = 37/384 (9%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           + P   + D+ E +P     +      G       +S           +        A  
Sbjct: 23  FAPTAAQTDQTEEYP--WKNVELLRDAGFMGMTLPKSIGGQGLSYLDAVIVVEEMAKACA 80

Query: 147 EAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
             G +   +   A   +A   TP   K  A  + + +                 + ++E 
Sbjct: 81  TMGRITVEANMGAIGAIAKYGTPEQLKIAADLVLAGD--------------KPAICISEP 126

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPR 260
             G+  + +T++  +  D         W     +S   ++ A+V     +  +G F+  R
Sbjct: 127 NAGSAASEMTTRADRQGDHYIINGEKYWITGGGVSKVHLIFARVLEDGVDQGIGGFICVR 186

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------TFGFLLGDLNVSTGPVEDMKI 314
             E+ SP GL   R    +G R      +EF +            G L      +     
Sbjct: 187 DGEN-SPAGLVIGRRLYAMGVRGIPETHIEFHDLKVHKSMLVVPPGGLKRGFASLMTAYN 245

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + +  +++   + +  E +   + RH  G  +     ++   AD++  + AA  L  
Sbjct: 246 AQRVGAGTVALGIAQGAFEEGLERLKTRHQFGRPIAGFQGLQWMAADMSTQLEAARLLLR 305

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A S +E     +        A   K +  + A  V  +A++  G SGY  E  + RH 
Sbjct: 306 HAAASGEEFPDIDK--------AARAKIFAAETANKVTNDALQFWGSSGYGRENPMERHV 357

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++   +I  G+   +   V   L
Sbjct: 358 RDARMFTIAGGTAQILRTQVAGKL 381


>gi|254700013|ref|ZP_05161841.1| acyl-CoA dehydrogenase family protein [Brucella suis bv. 5 str.
           513]
 gi|254705721|ref|ZP_05167549.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254710954|ref|ZP_05172765.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           B2/94]
 gi|254712573|ref|ZP_05174384.1| acyl-CoA dehydrogenase family protein [Brucella ceti M644/93/1]
 gi|254715646|ref|ZP_05177457.1| acyl-CoA dehydrogenase family protein [Brucella ceti M13/05/1]
 gi|256015564|ref|YP_003105573.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|256029336|ref|ZP_05442950.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256157529|ref|ZP_05455447.1| acyl-CoA dehydrogenase family protein [Brucella ceti M490/95/1]
 gi|256253496|ref|ZP_05459032.1| acyl-CoA dehydrogenase family protein [Brucella ceti B1/94]
 gi|260167574|ref|ZP_05754385.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99]
 gi|261217395|ref|ZP_05931676.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261313141|ref|ZP_05952338.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261318534|ref|ZP_05957731.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261320268|ref|ZP_05959465.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|261750496|ref|ZP_05994205.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
 gi|261756996|ref|ZP_06000705.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|255998224|gb|ACU49911.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915]
 gi|260922484|gb|EEX89052.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1]
 gi|261292958|gb|EEX96454.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1]
 gi|261297757|gb|EEY01254.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94]
 gi|261302167|gb|EEY05664.1| acyl-CoA dehydrogenase domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261736980|gb|EEY24976.1| acyl-CoA dehydrogenase [Brucella sp. F5/99]
 gi|261740249|gb|EEY28175.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513]
          Length = 388

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 30  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 135 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 193

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 194 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 251 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 311 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 363

Query: 441 SI 442
            +
Sbjct: 364 QV 365


>gi|17988837|ref|NP_541470.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|265990095|ref|ZP_06102652.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265992795|ref|ZP_06105352.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|17984659|gb|AAL53734.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|262763665|gb|EEZ09697.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|263000764|gb|EEZ13454.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 395

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 37  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 93

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 94  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 141

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 142 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 200

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 201 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 258 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 318 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 370

Query: 441 SI 442
            +
Sbjct: 371 QV 372


>gi|62317366|ref|YP_223219.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|83269343|ref|YP_418634.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308]
 gi|189022618|ref|YP_001932359.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|254690865|ref|ZP_05154119.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695825|ref|ZP_05157653.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698646|ref|ZP_05160474.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732093|ref|ZP_05190671.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 4 str.
           292]
 gi|256256049|ref|ZP_05461585.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260544602|ref|ZP_05820423.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|297249404|ref|ZP_06933105.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
 gi|62197559|gb|AAX75858.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939617|emb|CAJ12605.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA
           dehydrogenase, central domain:Acyl-CoA dehydrogenase,
           N-te [Brucella melitensis biovar Abortus 2308]
 gi|189021192|gb|ACD73913.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19]
 gi|260097873|gb|EEW81747.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038]
 gi|297173273|gb|EFH32637.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196]
          Length = 388

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 30  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 135 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 193

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 194 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPISNLIGEEGKGFRYILSGMNAERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 251 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 311 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 363

Query: 441 SI 442
            +
Sbjct: 364 QV 365


>gi|322709234|gb|EFZ00810.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 570

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 131/372 (35%), Gaps = 34/372 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS----------- 153
               R    G+        + P        I  A L     L     MS           
Sbjct: 201 EEAERFCKSGIPFVDIPEPYRPADIPNIGGIPRAELDAFHFLIMSDEMSRVEGGVGIALA 260

Query: 154 -PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S   A  +    T    + W P +F+R                  LG+TE  GG+D+A
Sbjct: 261 GASSIGAPPIVNCGTEEQKRKWLPGLFTR-------------KTNFSLGITEPSGGSDVA 307

Query: 213 AITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            I +  +K  DG  Y ++G K +++       +  A   GR G   V  L+      G+ 
Sbjct: 308 RIKTTAEKTPDGKFYIVNGVKKWITGTPWATHMTTAVRTGRPGMKGVSLLVIPMDSPGIM 367

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKIL--IYLDSAIMSVSGM 328
           +Q+++N  G  +     +   N    +   L     G +  MK          +      
Sbjct: 368 HQKIQNS-GQNAGGASFVYLENVRVPVENLLGEENEGFMIIMKNFNKERFLLTVGCNRKA 426

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R  LA +  YA +R   G  LI+  V++R ++++A  I A  A   +LA     +    E
Sbjct: 427 RSCLAMSFQYAMKRETFGKPLIENQVIRRKLSEMAHRIEAHWAWLEQLAYHIKCSDLGWE 486

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLG 445
           +   A  +A + K    ++      EA +  GG+GY++      + +  R+     +  G
Sbjct: 487 DPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYMKGGPGAAVEQINRDLRMLVVGGG 545

Query: 446 SGNAMVLDVLNL 457
           S   +    + L
Sbjct: 546 SEEIIADLAVRL 557


>gi|291239577|ref|XP_002739697.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain-like
           [Saccoglossus kowalevskii]
          Length = 343

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 113/365 (30%), Gaps = 77/365 (21%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--- 161
            L+      G      D  +       +  I    +  +A+++        V +  +   
Sbjct: 43  QLIDALFQQGFMGVEIDHKYGGSGL--SFFIANLVIEEIAKVDPSVAACVDVHNTVVNTA 100

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T      + PK+               T       L+E+  G+D  A+ +Q  K 
Sbjct: 101 INNNATEEQKARFLPKL--------------ATEFCGSFCLSEEGSGSDAFAMKTQAVKH 146

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            D         W  ++  +  +++                                    
Sbjct: 147 GDKYVLNGTKLWISNAEHAGLYVV------------------------------------ 170

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA----- 335
                    F+N     + + N+     +  K  I  L+   + ++     L +      
Sbjct: 171 ---------FANADPSKVPECNILGEVGKGYKYAIETLNEGRIGIASQMNGLTQGALNHV 221

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y   R   G  + D   M   I+   + + AA  +++  A   D     ++EAA A+ 
Sbjct: 222 IPYTISRKQFGHSIFDFQSMNHQISKAVIQLEAAKLMTYNAARLKDAGLPFTKEAAMAKY 281

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M         + A  V ++ ++ +GG G  +   + +++R+    +I  G+ N  +  + 
Sbjct: 282 M-------SSETASWVTSKCIDWMGGLGITKGFQVEKYFRDCKVGTIYEGTSNIQLNTIA 334

Query: 456 NLLEK 460
             L +
Sbjct: 335 KFLRQ 339


>gi|303318229|ref|XP_003069114.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108800|gb|EER26969.1| Acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 447

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 115/345 (33%), Gaps = 26/345 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              +    DG         F       A  I  A + +    E+G  M  + +    +  
Sbjct: 99  DFQQALARDGWLGICLPTEFGG----AALGISEAAVMMQTISESGAGMGGASSVHMNI-F 153

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P V      K  S E       P+ +       G+TE   G D   + S   K  D 
Sbjct: 154 GLEPVV------KFGSEEQKTRFLPPLIEGKERACFGVTEPNSGLDTLKLRSMATKDGDH 207

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                   W  ++  ++  ++L +             +     D   + +    +  K+G
Sbjct: 208 YILKGSKVWISTAQNAEKILILVRTTPVDKVAKPSLGLSLFYTDLDRSQVEVTEIP-KMG 266

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T  L F +       ++G+ +     +        +  A  ++     +L  A  
Sbjct: 267 RAAVDTNTLFFEDWRVPAEDMIGEEDNGFKMIMHGMNAERILIAAEALGLGYAALRRAAV 326

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R V G  +     ++  +AD  + + AA  + ++ A  +D   +  E A  A+ +A
Sbjct: 327 YASERQVFGRPIGKNQGIQHPLADSWMQLEAARLMVYQAARLYDAGHATGEYANAAKYLA 386

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +  C+ A       +   GG GY +E  + R+ RES    I
Sbjct: 387 AEAAFRACERA-------VMSHGGMGYAKEYHVERYLRESFIPRI 424


>gi|289806286|ref|ZP_06536915.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 214

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 6/215 (2%)

Query: 20  DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMAN 78
            +    NQP      N + SD  L   ++   +    +L   +G+ + +  + EL R+AN
Sbjct: 4   QTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLAN 63

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            + P+L  Y P G+R D V FHPAWH L++    + +H   W+       R  +   RAA
Sbjct: 64  AHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAA 119

Query: 139 RLYLMAQLEAGHLMSPSV-TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           R  L AQ+EAG L   ++  +A+ + L   P    DW   + S  YD       QK  + 
Sbjct: 120 RFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLL 179

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           IG+G+TEK+GG+D+ + T+  ++++D  Y L GHK
Sbjct: 180 IGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHK 214


>gi|228921915|ref|ZP_04085227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837747|gb|EEM83076.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 397

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PHANSWEIEQGIPS--DIIKTCAKNGYLGGTLPAEYGGLEWDYITYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPI----ACLVPKDSV 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|228942802|ref|ZP_04105323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975661|ref|ZP_04136202.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228784049|gb|EEM32087.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228816862|gb|EEM62966.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 397

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 36/388 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+  +  P+   +++    +G         +  +                  +  
Sbjct: 28  PHANSWEIEQGIPS--DIIKTCAKNGYLGGTLPAEYGGLEWDYVTYGLFTEAIARGSVSL 85

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    T      W P + S                   L LTE   G
Sbjct: 86  SGLFNVHTMVTETILKWGTENQKNQWLPLLASGNQ-------------IAALALTEPGAG 132

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+  I +   +  D +      KW      +D F++  ++ G          L      
Sbjct: 133 SDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPI----ACLVPKDSA 188

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-------YLDSA 321
           G+    +++ +G ++    E+EF+N    L    N+   P      L         +  A
Sbjct: 189 GVNVTHIRDMLGFKAAYLAEIEFNNVEIPL---ENIIGRPGFAFTYLAPYALEFGRISIA 245

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++  +R  L    ++   R   G  LID  ++   + D+ +D+ A+  LS     + +
Sbjct: 246 FAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLSLEACKAKN 305

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           E ++ + E         I KY+  +        A++ +G  G  +  SI+R +R+S    
Sbjct: 306 EHRADATEKIM------IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRCFRDSKTME 359

Query: 442 ILLGSGNA-MVLDVLNLLEKGTNLFEQL 468
           I+ GS     +L      +K     E++
Sbjct: 360 IVEGSNQIHQLLLGKGFAKKAKRAIEKI 387


>gi|306846021|ref|ZP_07478588.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
 gi|306273656|gb|EFM55501.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1]
          Length = 388

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 127/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 30  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLED-- 264
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D  
Sbjct: 135 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKQTDGLSVLIVDMV 193

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 194 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 251 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 311 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 363

Query: 441 SI 442
            +
Sbjct: 364 QV 365


>gi|317121571|ref|YP_004101574.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591551|gb|ADU50847.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 386

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 133/404 (32%), Gaps = 45/404 (11%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPA---WHA-------LLRRSIHDGLHCSI 119
           A +  R+A+  TP+         R+ + E  P    W         L+ R    G   S 
Sbjct: 3   ALDYYRVADLFTPEERLIQEEARRFLEAEAAPHIAQWWEEGTFPRHLIPRFGELGFLGSN 62

Query: 120 WDRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               +        A+ +    L  +           S      +    +    +++ PK+
Sbjct: 63  LPEEYGGAGASNVAYGLIMYELERIDSGLRSFASVQSSLVMYPIYRYGSEERRREYLPKL 122

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
              E             +    GLTE  GG+D  ++ ++ +K            W  +  
Sbjct: 123 ARGE-------------IVGCFGLTEPDGGSDPGSMKTRARKDGSSYVITGRKMWITNGN 169

Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
           ++D  ++ A+ + G +  F+VP         G   + +K+K   R++ T EL        
Sbjct: 170 IADIAVIWAKDDEGVIRGFIVPT-----DTPGFRAREIKHKASLRASVTSELILDEVRVD 224

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQ 352
               L  + G       L  L  A   ++            EA+ +AR R   G  + ++
Sbjct: 225 AAQMLPEARGLGAA---LSCLTQARYGITWGAAGVIDAVFHEALEFARHRITFGRPIAER 281

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            +++  + ++      A  +S+RL    DE K              + K    + A    
Sbjct: 282 QLVQAKLVEMVESHTQALLMSWRLGKLKDEDK-------LTYAQVSLAKRSNVRAALQAA 334

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             A E +GGSG   E +  RH           G+ +   L V  
Sbjct: 335 RSAREILGGSGITLEYAAIRHMLNLETVDTYEGTYDIHTLIVGR 378


>gi|319794988|ref|YP_004156628.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315597451|gb|ADU38517.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 398

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 141/426 (33%), Gaps = 41/426 (9%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
            A  P     E   L   +      ELA +   +          G   ++         +
Sbjct: 6   PATAPFEGSAEAAELSARIGDFIHGELAAIVREH----------GINHERSPDRETLRRV 55

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
            RRS   G +     ++   +      H +    +Y      A H+         + AL 
Sbjct: 56  WRRSNELGFYGITLPKAMGGLGLSVLDHVLIKEAIYASGSPLAPHVFGELSGPPRVGALA 115

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   + +               P+     AI   LTE   G+D  A+ ++ ++  D
Sbjct: 116 RQATPYQLEAFI-------------QPVANADKAICFALTEAEAGSDAGAVQTRAERQGD 162

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GN 281
             Y L+G K F+S  P +D  +++A          +     D    G   +     + G 
Sbjct: 163 D-YLLTGRKRFISGSPFADFALVMASTATDPAQREISAFFVDLGQPGARVESGYKTMAGQ 221

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
             + T ++           ++G+             +  L      V   RV+L +A+ Y
Sbjct: 222 --SHTGDIVLEACRVPARNMIGEPGRGLALALGRITVNRLLHCPAMVGLARVALNDALDY 279

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R   G  +     ++  +A++A D+AAA  L    A   D       EA+ A     
Sbjct: 280 ARGRRQFGRAISQFQAVQHMLANMATDLAAARGLMIATARQIDAGGEARAEASMA----- 334

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K +C + A  +   A++  GG G ++ R +   +R      +L G+       +   L
Sbjct: 335 --KLFCSEAAFRIADSAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTGTSEIQRNTIAREL 392

Query: 459 EKGTNL 464
                 
Sbjct: 393 LGDPAA 398


>gi|225686566|ref|YP_002734538.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|256043674|ref|ZP_05446599.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111283|ref|ZP_05452314.1| acyl-COA dehydrogenase [Brucella melitensis bv. 3 str. Ether]
 gi|256262297|ref|ZP_05464829.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564864|ref|ZP_05835349.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|225642671|gb|ACO02584.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457]
 gi|260152507|gb|EEW87600.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M]
 gi|263092024|gb|EEZ16321.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
          Length = 388

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 30  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 135 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 193

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 194 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 251 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 311 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 363

Query: 441 SI 442
            +
Sbjct: 364 QV 365


>gi|194291503|ref|YP_002007410.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193225407|emb|CAQ71353.1| Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 393

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 120/362 (33%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + RRS   G + +             A   +   +     L+A    S S  +A ++ 
Sbjct: 46  RQVWRRSSELGFYAA---------CLPTALGGKGLNIQEQCALKADLAASGSTLAAHVLG 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P    +   K  + E       P+ +   +    LTE   G+D  +I +      D
Sbjct: 97  DLGGPPRVGNML-KYATPEQLDQYFKPVIRGDKSTCFALTETHSGSDAQSIRTSAVTDGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNR 282
            +    G  +   +P +D  I++   +       +  +L D    G+        + G  
Sbjct: 156 DLVINGGKHYISGAPFADFAIVMCVTDATATPPAITAVLVDLDLPGVTVTNEYVPMSGQH 215

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM-----SVSGMRVSLAEAI 336
                ++ F N         NV  G     K+ +  ++   +      +     +   ++
Sbjct: 216 --IDGDIRFDNVRVP---RANVFGGEGNGFKLGMSRINVNRLLHCPSMLGLATRAYESSV 270

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA +R   GG +     ++  +AD+A  + A  ++            + ++  A  R+ 
Sbjct: 271 EYAGQRRQFGGPIARFQAIQHMLADMAAALWACESMIAHT-------AALADAGADLRMK 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +  +    V  +A++  G  G      + + +R+     I  G+       +  
Sbjct: 324 AAACKLFVSERCFEVADKAVQIHGNVGVTRGHPVEQTFRKLRMFRIFTGTSEIQRNTIAR 383

Query: 457 LL 458
            +
Sbjct: 384 AI 385


>gi|306841668|ref|ZP_07474356.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
 gi|306288263|gb|EFM59645.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2]
          Length = 388

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 127/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 30  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 87  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLED-- 264
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D  
Sbjct: 135 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKQTDGLSVLIVDMV 193

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 194 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 251 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 311 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 363

Query: 441 SI 442
            +
Sbjct: 364 QV 365


>gi|255946537|ref|XP_002564036.1| Pc20g15640 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588771|emb|CAP86893.1| Pc20g15640 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 424

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 116/362 (32%), Gaps = 40/362 (11%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+    P    L       G       + +          I  A + +    E+G  M+
Sbjct: 67  IDESHQFPT--ELYEALARRGWLGICLPQRYGGSEL----GISEAAVMMQTIAESGAGMT 120

Query: 154 PSVTSASMV------ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            + +    +      A   T      W               P+         G+TE   
Sbjct: 121 GASSIHMNIFGLEPVAKYGTEEQKDRWL-------------TPLIAGRQRACFGVTEPNT 167

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF----LVPRLLE 263
           G D   + +  ++  DG        W  ++  +D  ++L +   R         +     
Sbjct: 168 GLDTLQLQATARRSRDGYVLSGQKVWISTAQRADKILILVRTTPRDRVKKPSQGLSLFYT 227

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           D     +    +  K+G  +  T  L F N    +   +G+ N     +        +  
Sbjct: 228 DLQVPEVQITEIP-KMGRAAVDTNSLFFDNWHVSMEDRVGEENEGFRMILHGMNAERILI 286

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++     +L  A  Y+  RHV G  +     ++  +AD  + + AA  + ++ A  +
Sbjct: 287 GAEALGLGFAALRRAALYSNNRHVFGRPIGQNQGIQHPLADSWMKLEAARMMIYQAARLY 346

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +  E A   + +A    +  C+ A       +   GG GY +E  + R+ RE    
Sbjct: 347 DQGYTGGEYANAGKYLAAEAAFEGCERA-------ILTHGGMGYAKEYHVERYLREVFIP 399

Query: 441 SI 442
            I
Sbjct: 400 RI 401


>gi|308178427|ref|YP_003917833.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307745890|emb|CBT76862.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 410

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 102/281 (36%), Gaps = 13/281 (4%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E       PM +  +     LTE   G+D  ++ ++  K+  G       KW  +  +
Sbjct: 134 SDEQIQKYALPMLRGELPGAFALTEPTHGSDSVSLETRAAKVQGGYRLSGEKKWIGNGSI 193

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
               I+ A+ E       V   +      G     ++NK+  R+     +   N F    
Sbjct: 194 GGVSIVWARDEQGK----VRGFIVHQDAEGYSATTIENKLSLRAIWQAHIRMENVFVPDE 249

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             +  +    +  ++L    L  A  +V         A++YA++R   G  L    +++ 
Sbjct: 250 DVMPNAQSFKDTSRVLFATRLGVAWSAVGHATACYESAVNYAKQRVQFGRPLAQSQIVQE 309

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A    L  +             +A+ A+  A        + A  + + A +
Sbjct: 310 RLARMQSELATMQVLVMQATKREGAGDLTGPQASLAKYTA-------TRTARVIASNARD 362

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GG+G +    +ARH+ +  A     G+     L +   +
Sbjct: 363 LLGGNGILTSNRVARHFADVEAIHTYEGTETVQALIMGRDI 403


>gi|327349245|gb|EGE78102.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 442

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 125/365 (34%), Gaps = 29/365 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLE 147
              R +  E+    H L      DG                 +      +      A L 
Sbjct: 72  WATRDESGEYP---HELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQSGAGLA 128

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +V +   VA   T    +   P++ + +Y              +  G+TE   
Sbjct: 129 GAQSIHANVYATQPVAKFATEEQKQRMLPRLIAGDYR-------------VCFGVTEPNT 175

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G +   + ++  +  D         W  S+ ++   ++LA+       +     +     
Sbjct: 176 GLETLKLRTEAIRDGDSYSVSGQKIWISSAQVAKRMVLLARTTPLEEVKKPSEGLSLFFI 235

Query: 264 D--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D     +GL  +R+K K+G R+    E+ F N       L+G+       V         
Sbjct: 236 DFDKDASGLGLRRIK-KMGGRAVDANEVFFDNYRIPADSLIGEEGDGFKIVLHGMNAERC 294

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    ++L +A  YA+ R V G  +     +   +AD  +++ AA   ++  A 
Sbjct: 295 LLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQGIAHPLADAYMNLEAAKLATYHAAR 354

Query: 379 SFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D +K  +S       +   + KY   + A      A+   GG GY +E  + R+ RE 
Sbjct: 355 LYDASKTDKSITQKAVGVACNLAKYLAAEAAFTACERAVLAHGGMGYAQEYHVERYLREC 414

Query: 438 PANSI 442
               I
Sbjct: 415 FVPRI 419


>gi|313224335|emb|CBY20124.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 109/323 (33%), Gaps = 35/323 (10%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      ++   T    + + P + +                    GLTE   G++
Sbjct: 119 LSVQSSLVMWPISAYGTEEQKQKYIPDLATG-------------KKVGCFGLTEPNHGSN 165

Query: 211 IAAITSQGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
              + +  +  K +D      G  W  +SP++D  I+ A+ E       +   + +    
Sbjct: 166 PNGMETIAKYDKATDTYILNGGKTWITNSPIADTLIIWARSEAHDMK--IKGFILERQWE 223

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSG 327
           G+    +  K   R++ T  +   N               VE +      L++A   +  
Sbjct: 224 GISTPTIPGKYSLRASETGSIFLDNVKVPAENC----MPHVEGLSGPFGCLNNARYGIGW 279

Query: 328 MRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +  AEA  +A       R      L  Q +M+  + D+  +IA     +  L    D 
Sbjct: 280 GAMGAAEACFHAARNYTLERIQFDKPLARQQLMQYKMGDMLSEIAYGLEAALTLGRRMDA 339

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + S E         I K   C+ A  +   A + +GG+G  +E  I RH     A + 
Sbjct: 340 GTASSSE-------ISILKRKNCQTALDISRTARDMLGGNGVQDEYHIIRHMVNLEAVNT 392

Query: 443 LLGSGNAMVLDVLNLLEKGTNLF 465
             G+ +   L +   +  G   F
Sbjct: 393 YEGTHDIHTLILGREIT-GMQAF 414


>gi|313885601|ref|ZP_07819351.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619331|gb|EFR30770.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 402

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 120/321 (37%), Gaps = 30/321 (9%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M        +     + S V +  +      +APK+ S E+                 GL
Sbjct: 100 MDSSIGAFTIVHGGLAYSTVLIGGSQEQIDYYAPKLASYEWH-------------SCFGL 146

Query: 203 TEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVP 259
           TE   G+DIA  + +  +   D        KW   +  +D   + A+   +G++ CF+VP
Sbjct: 147 TEPLHGSDIAGGLATTAELQGDKWVINGEKKWIGGAATADVLPIFARDVADGQIKCFMVP 206

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IY 317
                G   GL   ++  KI  R      ++ +N        L       +  KIL    
Sbjct: 207 -----GGTPGLTVDKIDGKISLRLIQNGHIKMNNVQVDKTARLENINSFRDVAKILYTTR 261

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
            D A ++      +LA  + Y + R   G  +    +++  +A +  +   + ALS RLA
Sbjct: 262 ADVAHLATGLHAGALANTLKYVKEREQFGKKISQFQLVQEKLARMQANCVTSLALSHRLA 321

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              ++ +    +++ A++                +A   E +GG+G I E  +AR + ++
Sbjct: 322 QLQEQGRYEEVQSSLAKM-------NNAYRLRETVALGRELLGGNGIIVEHDVARFFVDA 374

Query: 438 PANSILLGSGNAMVLDVLNLL 458
            A     G+     L +   L
Sbjct: 375 EAAYSYEGTHEVNSLILGRFL 395


>gi|331011702|gb|EGH91758.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 333

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 113/300 (37%), Gaps = 32/300 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLRTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGSIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323


>gi|23500532|ref|NP_699972.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161620858|ref|YP_001594744.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|254703134|ref|ZP_05164962.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|260567937|ref|ZP_05838406.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261753754|ref|ZP_05997463.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
 gi|23464165|gb|AAN33977.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330]
 gi|161337669|gb|ABX63973.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365]
 gi|260154602|gb|EEW89683.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40]
 gi|261743507|gb|EEY31433.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686]
          Length = 388

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 128/361 (35%), Gaps = 37/361 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + D+   +P  +  +      G    +    +       +    A    +      G   
Sbjct: 31  KIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGAC 87

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              + +   +    +      + PKI S E                  G+TE   GTD  
Sbjct: 88  HAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDTG 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP 267
           A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D + 
Sbjct: 136 ALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMAK 194

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL  + ++  + N +  T E+ F N       L+G+       +        +  A
Sbjct: 195 AKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       ++
Sbjct: 252 AECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALYE 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+    
Sbjct: 312 AGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLYQ 364

Query: 442 I 442
           +
Sbjct: 365 V 365


>gi|84501898|ref|ZP_01000056.1| putative acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389893|gb|EAQ02527.1| putative acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 388

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 108/348 (31%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
             L ++   DG         +         A  +  A         A   +  ++   + 
Sbjct: 39  RELHQKLARDGWLGIAIPEEYGGSGLGIVDAAIMMQAIAESGGGNSAASAIHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V    T    K   P             P+         G+TE   G D   + ++  + 
Sbjct: 99  VVKFGTEDQKKKHLP-------------PLVAGDERACFGVTEPTTGLDTTKLKTRAVRQ 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ ++D  ++LA+       +     +     D     +  + ++ 
Sbjct: 146 GDRYVVHGQKVWISTAQIADKILLLARTTPLEDVKKPTEGLSLFYTDLDRTFVSVREIE- 204

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G +   + EL           L+G+       +        +  A  +V   R +L  
Sbjct: 205 KMGRKCVDSNELFIDGLPIPAEDLIGEEGQGFRQILHGLNPERVLVAAEAVGIGRNALRR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A    ++ AA  ++      +D  K    EA   +
Sbjct: 265 AADYANERVVFGRPIGQNQGVQHPLAACWAELEAANLMAMNAGALYDAGKPCGNEANAGK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +A        + A      A    GG GY +E  + R  RE+    I
Sbjct: 325 YLAG-------EAAVKATQTAQLTFGGFGYAKEYHVERLVREAILFRI 365


>gi|323357213|ref|YP_004223609.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
 gi|323273584|dbj|BAJ73729.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037]
          Length = 413

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 125/424 (29%), Gaps = 36/424 (8%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV--EFHPAWH 104
               P       +LLG           A  A+        +       D+V       W 
Sbjct: 7   ARTLPGERVSHYDLLGRR----DTDYYAVFADIPDADRAVWDRAKAFCDEVGTRMQGEWD 62

Query: 105 ------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
                  LLRR     L     +    P     A  +    +       A  L      +
Sbjct: 63  AATYPVELLRRMGELELFTDGIEHPELPESSPLAAGLVNMEVSRHDGSLATALAVQGGLA 122

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
              +AL  +P     W               P+   +V     LTE   G+D  ++ +  
Sbjct: 123 LRTLALFGSPEQQARWL-------------GPLADGTVLGAFALTEPDHGSDSVSLETTA 169

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
            + +DG       KW  +        + A+VE   G     V   L +    G     + 
Sbjct: 170 TRTADGWSLSGTKKWIGNGASGGITFVWARVENEGGDDHGNVRCFLVEQDTPGYTGTVIT 229

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE--DMKILIYLDSAIMSVSGMRVSLAE 334
            K+  R      +   +        L  +    +   +        A  ++         
Sbjct: 230 GKVSLRGIHQAHIAMDDVRLAPDAVLPGTHTFKDASTVLFATRSGVAWSALGHATACYEI 289

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R   G  L    +++  +A +  ++ A      RLA+       R  +A+ A 
Sbjct: 290 ARTYATERMQFGKPLAKFQMVQERLAQMLDELTAMQLYCRRLADLESSGGLRPTQASLA- 348

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                 KY   + A  V + A + +GG+G + E  + +H  +  A     G+ +   L +
Sbjct: 349 ------KYHNTRAARRVASIARDLLGGNGILLENGVMQHMADIEAIHTYEGTESVQALLL 402

Query: 455 LNLL 458
              +
Sbjct: 403 GRDI 406


>gi|25027285|ref|NP_737339.1| putative glutaryl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259506577|ref|ZP_05749479.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
 gi|23492566|dbj|BAC17539.1| putative glutaryl-CoA dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259165775|gb|EEW50329.1| glutaryl-CoA dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 420

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 114/370 (30%), Gaps = 35/370 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL     +GL     +           + I    L          +      + + +A
Sbjct: 64  RELLPEMAAEGLFGMHIEGYGCGGRTATEYGIAMQELEAGDSGLRTVVSVQGSLAMTAIA 123

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + W P              M K  +    GLTE   G+D A++ ++    + 
Sbjct: 124 KHGSEEQKQTWLPG-------------MAKGEIIGCFGLTEPTAGSDPASMGTRATWENG 170

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPR------------LLEDGSPNGL 270
                   +W   + ++D  I+ A+V +       V               +     +G 
Sbjct: 171 EWVLNGEKRWIGLANIADVAIIWAKVSDEDARAAGVLAGPGSDNGEKVRGFIVPTGTDGF 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             + +  K+  R++   E+   N    G  +   N                 A  ++   
Sbjct: 231 HAEAITQKLSMRASIQCEIHMDNVRLDGDAILPKNPGLKGPFMCLNEARFGIAWGALGAA 290

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R S+  AI Y+  R      L    + ++ +AD+ +++     L+ +L  + D       
Sbjct: 291 RDSIEAAIEYSSTRMQFDRPLSSFQLTQKKLADMTVELNKGQLLALQLGRAHDAG----- 345

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                     + K   C+ A  +  EA   +GG+G   + S  RH     +     G+  
Sbjct: 346 --TLENHQISVGKLANCRTAIEICREARTILGGNGISLDYSPLRHANNLESVRTYEGTDE 403

Query: 449 AMVLDVLNLL 458
              L +   L
Sbjct: 404 VHTLIIGQKL 413


>gi|324999971|ref|ZP_08121083.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 388

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 119/347 (34%), Gaps = 29/347 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS-PSVTSASMV 162
           + L       G H    D  +             AR    +      +   PS   A  V
Sbjct: 41  YELWDAMAEAGFHAMGIDEEYGGQGGNAVDTAVLARELARSLGGLSWVWGIPSFAGAKAV 100

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKI 221
               T    +++ P++                 +   + +TE  GGTD+  A+T++ +K+
Sbjct: 101 THGGTEEQKREYLPRL-------------AAGDIRFSIAVTEPGGGTDLLGAMTTRAKKV 147

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSPNGLCYQRLKNK 278
             G        W   +  +   ++LA+  +        P   LL      G+   R   K
Sbjct: 148 DGGWVVKGQKMWSTGAKEATYLLILARSGDPEAPGKRAPTTLLLVPTDSPGIEM-RYIPK 206

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G R+  + E+   + F     LLG  +     +        + S  +++  +   L E+
Sbjct: 207 LGMRAMGSCEVFLDDVFVPDSQLLGTEHQGFRVLLASLNNERIMSGALALGMLDGILEES 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R   G ++    +++  IAD AL    A  + F  A          +EA     
Sbjct: 267 VEYAKNRMTFGRVIGGHQIIQHYIADTALGQKQAELMVFDAAWREASGMRCHQEANM--- 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                K    ++A +     ++ +GG G   E    R +R+     I
Sbjct: 324 ----VKVVTSELAVSAADRGIQILGGMGISSETHAQRFWRDLRQFRI 366


>gi|262198058|ref|YP_003269267.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365]
 gi|262081405|gb|ACY17374.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365]
          Length = 413

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 123/368 (33%), Gaps = 38/368 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGHLMSPSVTSASM 161
             L+ R    G        ++  V      +       +       A    +     + +
Sbjct: 52  RELVARLGEGGWLRYAVPAAYGGVHATLDVRSLCLVREILGWHFGLADFAFAMQGLGSGV 111

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-- 219
           ++L  +      + P++                       L+E   G+D+AA+ ++ +  
Sbjct: 112 ISLFGSEAQCARYLPRV-------------AAGEAIAAFALSEPEAGSDVAAMATEARLL 158

Query: 220 ----------KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
                     +   G        W  +  ++D +++ A+     G   +     D    G
Sbjct: 159 DGGDGAGQGDENGAGYVLRGTKTWISNGGIADFYVVFARTGEGAGARGLSAFAVDAGAPG 218

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVS 326
           L      + +     AT  L F +        L  +          +          ++ 
Sbjct: 219 LRVAARIDTMAPHPLAT--LAFEDCRVPADALLGTAGRGFHAAMATLDVFRSTVGAAALG 276

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +L EA+  AR R + GG+L D P+ +  +AD+A ++ AA  L +R A++ D     
Sbjct: 277 FARRALDEAVARARSRVMFGGVLADLPLAQAKLADMATELDAAALLVYRAAHAKDGG--- 333

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
              A      A + K +  + A  +I +A++  GG G      +   YRE  A  I  G+
Sbjct: 334 ---AERVTREAAMAKMYATEAAQRIIDDAVQLFGGLGVQRGSKVEELYREIRALRIYEGA 390

Query: 447 GNAMVLDV 454
                L V
Sbjct: 391 TEVQKLVV 398


>gi|330464977|ref|YP_004402720.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
 gi|328807948|gb|AEB42120.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
           maris AB-18-032]
          Length = 618

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 96/559 (17%), Positives = 194/559 (34%), Gaps = 102/559 (18%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA--------NYNTPQLH 85
            N +     +      F    + +L++            LAR          + N P   
Sbjct: 13  FNLFE----VFGADRAFGQEPYTDLDVDTARTFLAEMDRLAREDLAASYTDSDRNPPV-- 66

Query: 86  AYGPGGERWDKVEFHPAWHAL-----LRRSIHDGLHCSIW--DRSFEPVVRKQAHKIRAA 138
                        F PA H        ++S    +    W  D   E         +  A
Sbjct: 67  -------------FDPATHTAPLPESFKKSYQAFMDSEFWRLDLPAELDGSNAPRMLWWA 113

Query: 139 RLYLMAQLEAGHLMSPSVTS-ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
              L+    A   M  S  S A ++ +  T R  K WA     +++  T           
Sbjct: 114 LAELVLGSNAPIWMYASGPSFAHVLRVEGTERQKK-WAKLFVDKQWGST----------- 161

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249
             + LTE   G+D+ A  ++     DG + + G K F++S   D        +LA+    
Sbjct: 162 --MVLTEPDAGSDVGAGRARAIPQPDGSWHIEGVKRFITSGEHDLSDNIVHYVLARPVGV 219

Query: 250 -------EGRVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
                     +  F+VP+   D      G  NG+    +++K+G + + T EL F     
Sbjct: 220 EGVGGPGTKGLSLFVVPKYHFDEETGELGERNGVYATNVEHKMGLKVSNTCELTFGEHGV 279

Query: 294 -TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347
              G+L+GD +     +  +     +     +++ +      A+ YA+ R          
Sbjct: 280 PAKGWLMGDKHDGIRQMFMIIEYARMLVGTKAIATLSTGYLNALEYAKNRVQGADLLQST 339

Query: 348 -------ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARI 395
                   +   P ++R++           AL    A+  D     EA    +    A+ 
Sbjct: 340 DKTAPRVTITHHPDVRRSLLLQKSYAEGLRALVCYTASWQDKVAIAEAAGDEKATKLAKR 399

Query: 396 ----MAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
               + P+ K    + A  ++  E+++  GGSG++++  + ++ R++  +++  G+    
Sbjct: 400 VNDLLLPLVKGVGSERAYELLGHESLQTFGGSGFLQDYPLEQYVRDAKIDTLYEGTTAIQ 459

Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTE 506
            LD++   ++         + + +++ + S G   ++    +       E + +   LT 
Sbjct: 460 SLDLIFRKIVRDNGKALMAVAAEIQEFITSEGGNGQLKQERQALGKALTEIQTILGVLTG 519

Query: 507 KIALASSAA--ALYRAGMN 523
            +  A      ALY+ G+ 
Sbjct: 520 WLGEAQGGDTRALYKVGLA 538


>gi|171684241|ref|XP_001907062.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942081|emb|CAP67733.1| unnamed protein product [Podospora anserina S mat+]
          Length = 435

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 37/368 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P           +G        S           I  A + +    E+G  
Sbjct: 65  QEHDQNEQDP--KEFHAAMAKNGWLGIALPESLGGSGL----GISEATMMMQTIAESGAG 118

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   +    +   PKI S ++              +  G+TE 
Sbjct: 119 MAGAQSIHANVYATQPLAKFGSTAQLESTIPKIISGQWR-------------VCFGVTEP 165

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPR 260
             G D   ++++  K SDG Y ++G K +++ + ++   I+LA+       +     +  
Sbjct: 166 NAGLDTLRLSTRATKQSDGSYKVTGQKIWITCAQVASKMILLARTTPLEEVKKPSEGLSL 225

Query: 261 LLED--GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
              D   S  GL  +R+K K+G R+    E+ F N       L+G+       +      
Sbjct: 226 FCIDLDRSSPGLELRRIK-KMGGRAVDANEVFFDNYSVGVDSLIGEEGQGFKIILHGMNA 284

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++     +L +A  YAR R+V    +     +   +A++ + + AA   ++ 
Sbjct: 285 ERCLLAGEALGLGYAALGKAATYARERNVFKRPIGQNQGIAHPLAEVYMKLEAAKLATYH 344

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A  +D +K+  +       +     KY   + A +    A+   GG GY  E  + R++
Sbjct: 345 AAQLYDSSKADKTIRQDAVGVACNSAKYLAAEAAFSACERAVLTHGGMGYAVEYDVERYF 404

Query: 435 RESPANSI 442
           RE     I
Sbjct: 405 RECLVPRI 412


>gi|300712832|ref|YP_003738644.1| Butyryl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299126516|gb|ADJ16853.1| Butyryl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 413

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 142/433 (32%), Gaps = 45/433 (10%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT--PQLHAYGPGGERWDKVEFH 100
           L   +  F   V +E   +    L+    E+ R  N +   P+L          D V  H
Sbjct: 2   LRQEVRRF---VDEEFRPI----LNDLPDEIERYHNLDPKNPELT---------DNVRPH 45

Query: 101 P------AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           P          L +++   G         +         +          ++        
Sbjct: 46  PIKIPEEDQQRLRKKAKKAGFWAMGVPEEYGGGGLNLVERCVVLEELSKHRMGLYQAGLG 105

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
            +     +  +  P  + D A     +E+      P          GLTE   G+D   +
Sbjct: 106 VIELGPGLT-VGEPAAYLDNADDYQIKEFFQ----PCIDGERQSCFGLTEPAAGSDPRGM 160

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLC 271
            ++ +K  D         +   +  SD  I+ A+ + +   +    +   L     +G+ 
Sbjct: 161 ETRAEKDGDEWVINGTKHYISWAGDSDFIILFARTKPKGDDINDHGITTFLVPSDSDGIS 220

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            + +      R     E+  ++       +LG+++   G  +       +  A  S+  +
Sbjct: 221 MRSIPV---IRPEYPFEVTLNDVRVPDENVLGEVDGGLGIAKQCLGESRVLYAANSLGPI 277

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             S+   I +A  R V    L D+  ++  IA  A+D  AA    +  A  FD+ +    
Sbjct: 278 DQSIRMGIEWANNRVVGDEKLADKQAIQWKIAKSAVDYQAAKYSVYHAAQRFDDGEDIRH 337

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            +        ITKY   +    V+   ++  GG+G   +  + R  RES    I  G   
Sbjct: 338 AS-------SITKYQTTETLWTVLDRMVQIHGGAGVDGDLPLERWLRESRVRRIGEGPSE 390

Query: 449 AMVLDVLNLLEKG 461
             +  +   L KG
Sbjct: 391 IQLKTIARNLLKG 403


>gi|33595315|ref|NP_882958.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565392|emb|CAE36198.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 134/389 (34%), Gaps = 48/389 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++  R +     P+ H       + D+   +P     +      G   ++  + ++ 
Sbjct: 11  QEIRDAVRSLCKQFPPEYH------RQVDEKRGYPE--EFVNALTRAGWLAALIPQEYDG 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A +       +             +   + +    T    + + P+I S E    
Sbjct: 63  PGLSMA-EASVIMEEINRSGGNSGACHGQMYVMNTIVFSGTEEQKRKYLPRIASGELR-- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                        +G+TE   G+D   + +   K  DG + ++G K ++S    SD  I+
Sbjct: 120 ----------VQSMGVTEPTTGSDTTKLKTTAVKK-DGRWVINGQKVWISRVQHSDLLIL 168

Query: 246 LAQVEG---------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
           LA+             + CF+V   L+    NGL  + + N + N    T EL F N   
Sbjct: 169 LARTTPVEQVQKRSDGLSCFIVE--LDKAIGNGLTVRPILN-MVNH--ETNELFFDNLEL 223

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG        + +         A   +      L +A  YA  R V G  +    
Sbjct: 224 PEDALLGAEGKGLKVIFEGLNAERTLIAAECIGDGYWFLEKARDYANERKVFGRPIGQNQ 283

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A+  +++ AA  + ++  +  D  ++   EA  A+ +A    +           
Sbjct: 284 GIQFPLAECFIELEAANLMRWQACSKIDARQNAGVEANMAKYLAAKASW-------EAAN 336

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSI 442
             ++  GG G+  E  +   +RE+    +
Sbjct: 337 ACLQTHGGFGFACEYDVEWKFRETRLYQV 365


>gi|257791586|ref|YP_003182192.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317488001|ref|ZP_07946583.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475483|gb|ACV55803.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912903|gb|EFV34430.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 402

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 127/372 (34%), Gaps = 27/372 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
                 +I + L+       +      +   ++    +         HL   +  +  ++
Sbjct: 39  QEFYDLAIENNLYRYALPEEYGGWGLSEKEILQVQEEFSRGPGGMRMHLHYAADLNWRIL 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                P +  ++  K              Q  ++     LTE+ GGT  A + +   K  
Sbjct: 99  DDYGKPELKAEFMDKF-------------QDKTIFTNFALTEQTGGTG-ADLHTTALKDE 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G Y L+G KW +S      +  ++A  +    G   +          G     + + +G
Sbjct: 145 NGNYVLNGEKWLISHTDCSQYAYVIAVTDPEKQGDERLSAFFVPMDTPGFELVPMPHMMG 204

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R       + ++      +LLG+             +  +  A  ++   +  L  +I 
Sbjct: 205 CRGAGHAGFKMTDVVLDPKYLLGEEGQGMEVAMHSLAISRVHIADSNLGMAQRMLEMSIA 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            AR R   G  +I +  +K  +A++A +I A   +    A+ +D+         +    A
Sbjct: 265 RARDRVTFGKPIIQRQAIKMKLANMATNIHALRCMVMDFADDYDKDPHN----EFVDEKA 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDV 454
            + K +       V  E +E  GG GY E+       R YR+  A  +  G+     + +
Sbjct: 321 AMCKLFSIDTVKMVSDEMLEIFGGDGYFEDSPYGPTERLYRDCRAMWLEEGAPTVQRITI 380

Query: 455 LNLLEKGTNLFE 466
              ++K     E
Sbjct: 381 ARGVDKHDGHVE 392


>gi|119176002|ref|XP_001240141.1| hypothetical protein CIMG_09762 [Coccidioides immitis RS]
          Length = 447

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 115/345 (33%), Gaps = 26/345 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              +    DG         F       A  I  A + +    E+G  M  + +    +  
Sbjct: 99  DFQQALARDGWLGICLPTEFGG----AALGISEAAVMMQTISESGAGMGGASSVHMNI-F 153

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P V      K  S E       P+ +       G+TE   G D   + S   K  D 
Sbjct: 154 GLEPVV------KFGSEEQKTRFLPPLIEGRERACFGVTEPNSGLDTLKLRSMATKDGDH 207

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                   W  ++  ++  ++L +             +     D   + +    +  K+G
Sbjct: 208 YILKGSKVWISTAQNAEKILILVRTTPVDKVAKPSLGLSLFYTDLDRSQVEVTEIP-KMG 266

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T  L F +       ++G+ +     +        +  A  ++     +L  A  
Sbjct: 267 RAAVDTNTLFFEDWRVPAEDMIGEEDNGFKMIMHGMNAERILIAAEALGLGYAALRRAAV 326

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R V G  +     ++  +AD  + + AA  + ++ A  +D   +  E A  A+ +A
Sbjct: 327 YASERQVFGRPIGKNQGIQHPLADSWMQLEAARLMVYQAARLYDAGHATGEYANAAKYLA 386

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +  C+ A       +   GG GY +E  + R+ RES    I
Sbjct: 387 AEAAFRACERA-------VMSHGGMGYAKEYHVERYLRESFIPRI 424


>gi|86747342|ref|YP_483838.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86570370|gb|ABD04927.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 388

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQ 145
                R D+    P  H   +     G        ++        +A  +  A     A 
Sbjct: 25  DAYWLRKDREGGFP--HDFHKALADAGWLGICVPEAYGGSGLGITEAAIMMRAISESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V   + V +  T    +   P             PM +        +TE 
Sbjct: 83  MSGASAVHINVFGLNPVVVFGTEEQRRRMLP-------------PMVEGREKACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ ++   ++LA+       +     +   
Sbjct: 130 NTGLNTTQLKTRAVRKGDRYIVNGQKVWISTAQVAHKILLLARTTPLEDVKSPTHGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
             D     +    + +K+G +   + EL F++    +   +G+       + +      +
Sbjct: 190 YTDLDRRKVEIHEI-DKMGRKIVDSNELFFADYEIPVEDRIGEEGSGFQYILEGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V   +++L+ A  YA+ R V    +     ++  +A   +++ AA  +    A 
Sbjct: 249 LIAAEAVGLGKLALSRASDYAKSRIVFNRPIGQNQGIQHPLAKNWVELEAAWLMVMSAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+       A  A+ +A    +  C+       +A+   GG GY +E  + R+ RE  
Sbjct: 309 QYDKGMPCGAAANAAKYLAGEAGFSACE-------QAVMTHGGFGYAKEYHVERYLREVL 361

Query: 439 ANSI 442
              I
Sbjct: 362 IPRI 365


>gi|295695810|ref|YP_003589048.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411412|gb|ADG05904.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 395

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 124/369 (33%), Gaps = 35/369 (9%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSAS 160
              L +R    GL      +    +            +   + +   A    +P   +  
Sbjct: 43  MRGLQKRVKEAGLWAPHLPKEAGGLGMGYVTLGLMNEILGRSPIAPRAFGTNAPDTGNQE 102

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQ 219
           ++ L  T    + +               P     +     +TE    G+D   + +  +
Sbjct: 103 ILWLAGTQAQKERYLK-------------PSVAGEIYTAFAMTEPEVSGSDPTLLRTTAR 149

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKN 277
           +  DG + + GHKWF +    +  FI++A  +            + +    GL   R   
Sbjct: 150 RDGDG-WVIDGHKWFATGGSRAAFFIVMAVTDPDADPHRRASMFIVEAGTPGLEIVRDVP 208

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVS 331
            +G+      EL F N     +   N+     +  ++         +  A+  +  MR S
Sbjct: 209 VMGDTLGGHTELWFRNCR---IPGENLLGEVGDGFRLAQLRLGPGRITHAMRWIGVMRRS 265

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
               + Y +RR   G  L D   ++  IA+   DI  +  L+   A   D+     +E  
Sbjct: 266 FEMMLDYVQRRETRGQKLADFQTVQNDIAESYADIETSRFLTLHAAWKMDQGLDARKE-- 323

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K++       VI  A++  G  G+ ++  +   YRE+ A  I  G+     
Sbjct: 324 -----ISLIKFYGANALHRVIDRAIQVHGALGFSKDTPLEGFYREARAARIYDGADEVHR 378

Query: 452 LDVLNLLEK 460
           + V   + +
Sbjct: 379 VVVAKRIMR 387


>gi|320041215|gb|EFW23148.1| medium-chain specific acyl-CoA dehydrogenase [Coccidioides
           posadasii str. Silveira]
          Length = 440

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/445 (18%), Positives = 161/445 (36%), Gaps = 48/445 (10%)

Query: 36  AYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
            +S    L  L + + +  H+E +          L+  A E  R +         +G   
Sbjct: 10  PFSEPPYLCGLPSPYYTDAHREFQKRCRAFLWENLNKHAMEWERDSQVPEHVFEIFGKHN 69

Query: 92  ERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +        L R  IHD  G+    WD  +  +   +      AR  L       
Sbjct: 70  MLLPNLPSPLPVDWLKRLDIHDILGVKVEDWDLVYTGIYLDEM-----ARSGLHGPPS-- 122

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +        +    + ++ + + P+  +                 + + +TE   G+
Sbjct: 123 SLTAGLAFGIPPIIKFGSEQLKERFLPEFLTC-------------KKRMCIAITEPDAGS 169

Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G  G   +  ++    + 
Sbjct: 170 DVANITTTAEKTADGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGASGLSIVVVPLKNY 229

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  +R     G  ++ T  +E  +       L+G+  +    +        L  A+  
Sbjct: 230 PGVSMRRFYVS-GQTASGTTYIELDDVKVPVENLIGEEGLGMKYIMTNFNHERLTIAVGV 288

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRLANS- 379
               RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ +  A      ++L +  
Sbjct: 289 TRQARVALSSAFEYCIKREAFGKTLMDQPVVRHRLAKAGAELESMWAWVEQFLYQLKHMP 348

Query: 380 FDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            DE   R     A A+  A +    C ++A       +   GG+G         + +  R
Sbjct: 349 KDEGDRRLGGLTALAKAKAGMVLNECSQVA-------VLLFGGNGLTRTGQGELVEKISR 401

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           E     I  GS + ++   +  L K
Sbjct: 402 EVWGARIPGGSEDVLLDLSIRQLVK 426


>gi|310799288|gb|EFQ34181.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 432

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 127/367 (34%), Gaps = 38/367 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +      V   A  +    +  +       +   S      +A
Sbjct: 85  KKILEEMGELGLLGATIEGYGCAGVSTVAGGLITKAVERVDSGYRSGMSVQSSLVMGGIA 144

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS- 222
              T      + P              M    +    GLTE   G+D  ++ +  +    
Sbjct: 145 EFGTQEQKDKYLP-------------AMATGKMLGAFGLTEPNHGSDPGSMETVARPHPT 191

Query: 223 -DGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
             G Y LSG K W  +SP++D  ++ A++   G++  FLV R     S   L    +KNK
Sbjct: 192 KKGYYSLSGSKTWITNSPIADVLLVWAKLQETGKIRGFLVER--SQCSAGTLETPPIKNK 249

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS-----GMRVSL 332
            G R++ T  ++  +               VE ++     L+SA   ++      +   +
Sbjct: 250 NGLRASITGMIQLDDAPVPAENM----FPSVEGLRGPFSCLNSARYGIALGVMGALEDCV 305

Query: 333 AEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           A A  YA  R       L    ++++ +AD A D A  T  + ++    DE K+  E   
Sbjct: 306 ARARAYALERRQFKNNPLARYQLVQKKLADAATDAAYGTVAAIQVGRLKDEGKATPE--- 362

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               M  + K   C  A        E  GG+   +E +I RH           G  +   
Sbjct: 363 ----MISMVKRQNCDRALHNARVLQEIFGGNAVSDEYAIGRHVANLFVTQTYEGQSDIHS 418

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 419 LILGRAI 425


>gi|262203024|ref|YP_003274232.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086371|gb|ACY22339.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 379

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 127/355 (35%), Gaps = 27/355 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L ++    G    +    +                 + A +     + P++ +A+   
Sbjct: 42  QELYKKMAALGWTGILVPEEYGGAGAGNVEMSILLEDSMRA-MAPIGGIGPTLITAAAYQ 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                ++ K+    +   +              ++ + ++E   G+D+A +T + +K+  
Sbjct: 101 KFADEQLKKEVLTGVVDGD--------------SLSVSMSEPEAGSDVANLTCRAEKVDG 146

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G        W  ++  + + +++A+ +        + +        GL  + + + +G R
Sbjct: 147 GWIINGQKTWCSNAHFAKSILLIARTDRTGAKHEGLTQFHIPADTPGLEIKGI-DTVGGR 205

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                +L F+N       ++G +      +        L  A M +     S A+ + + 
Sbjct: 206 EVN--DLYFTNVRVPDSAVVGQVGNGWNQLMAGLNTERLILAAMQLGVAERSFADTLAFV 263

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +     ++  +AD A +I     L +R+A   DE  ++          A +
Sbjct: 264 TERKQFGRPVGTFQALRHRLADHATEIECTKLLVYRVAQLADENPTK-----LFPREASM 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            K    +++ A+  +AM+ +GG GY  E    R  R +  +++  G+       +
Sbjct: 319 AKLKATEVSKAMTIDAMQMMGGYGYATEFDAERQMRGAIISTVYGGTNEIQRDII 373


>gi|226363991|ref|YP_002781773.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242480|dbj|BAH52828.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 388

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 113/352 (32%), Gaps = 30/352 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL--MSPSVT 157
           H             G        ++                   +         M  S+ 
Sbjct: 35  HEFPTEFYDAFAKGGWLGITTPEAYGGHGMGITEASILLEEVAASGAGMNGASSMHLSIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  +  + +   P+I   +               +  G+TE   G D   IT+ 
Sbjct: 95  GMHPVIVHGSEELKQRTLPRIVDGDLH-------------VCFGVTEPGAGLDTTKITTF 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQ 273
            ++  D         W   +  S+  ++L +     + +     +   L D   + +  +
Sbjct: 142 ARREGDKYIVNGRKVWISKAMESEKILLLTRTTKFEDAKKKTDGLTLFLTDLDRSKVDIR 201

Query: 274 RLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +K K+G  +  + EL        +   +G+       + D      +  A  ++   R 
Sbjct: 202 PIK-KMGRNAVTSNELFIDGLEIPVEDRVGEEGKGFKYILDGLNPERMLVASEALGIGRA 260

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L   + YA  R V G  +     ++  +AD    + AA  +  +    +D  K  + EA
Sbjct: 261 ALRRGVQYANEREVFGRPIGMNQGLQFPLADSLARLDAAELVLRKATWLYDNGKPCAREA 320

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             A+ +       C          A++  GG GY EE  +AR++RE+    I
Sbjct: 321 NMAKYL-------CADAGFQAADRALQTHGGMGYSEEYHVARYFREARLTKI 365


>gi|84501809|ref|ZP_00999967.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389804|gb|EAQ02438.1| butyryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 369

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 116/377 (30%), Gaps = 29/377 (7%)

Query: 92  ERWDKVEFHPAWHALLRR----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
            R+ + E  P W    R           +   GL                  +       
Sbjct: 7   RRFAEREIGPIWEKADRESEFPRPFFTAAAKAGLIGIAAPADVGGADLGVYEEA------ 60

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               +E    ++P + +A ++  +    +H    P+                    + + 
Sbjct: 61  --ICIEECARVNPGLPNALIIQGVAGGILHDFGTPE------QQDLARASINGEKILAIA 112

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G D+  + S  ++  D         +   +  +D  ++LAQ +   G   +   
Sbjct: 113 VTEPDAGNDVQNVKSTARRDGDDWVLDGIKSFITLAGEADVLVLLAQTDRERGREGMSFF 172

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
             D +  G+   R+     NR   T  +  +         +      +        +  +
Sbjct: 173 AVDRNSPGVEVSRIPT-YANRPAPTYRVHLNGVRVPEARRVPAGFRQIMAGFNRERILVS 231

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  M+ +   A+ YA+ RH  G  +     +   +A    DI AA  L++  A+ +D
Sbjct: 232 ARWLGHMQHAQDWALDYAKTRHQFGRPIGANQSIAFMLAQNQTDIEAARLLAYEAADRWD 291

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                 +            K +  +    V   A+   GG G  EE  + R   ++    
Sbjct: 292 SGCPIGD----LIQQVSCAKLFVTQAVVRVTQSALHIGGGWGLTEELPVMRMALDALVAP 347

Query: 442 ILLGSGNAMVLDVLNLL 458
           + +GS    +  +   L
Sbjct: 348 VTVGSFEIQLRAIAKQL 364


>gi|116671601|ref|YP_832534.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
           FB24]
 gi|116611710|gb|ABK04434.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
          Length = 399

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 122/371 (32%), Gaps = 38/371 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L       G+     +    P      + + A  L          +      + + +  
Sbjct: 58  DLAPELGELGVLGMHLEGYRCPGRSAVEYGLAAMELEAGDSGIRTFVSVQGSLAMTAIHK 117

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    ++W P++ + E             V     LTE   G+D +++T+  ++   G
Sbjct: 118 WGSEDQKQEWLPRMAAGE-------------VIGCFALTEPTAGSDPSSMTTVARRDGSG 164

Query: 225 ----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                      +W   + ++   ++ A  +  V  FLVP         G+    +  K+ 
Sbjct: 165 DDAGWVLDGVKRWIGLASVAGVMVVWAMTDDGVRGFLVPA-----GTPGVTATPINRKLS 219

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335
            R++   ++ F       LG   +  G          L+ A   ++   +  A      A
Sbjct: 220 MRASIQCDVAFDGVR---LGPEALLPGARGLRGPFTCLNEARYGIAWGAMGAARDSYEAA 276

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y++ R   G  L    + +  + ++ L+I   T L+  L    D    R E+      
Sbjct: 277 LKYSQDRLQFGRPLAGYQLTQEKLVNMLLEIQKGTMLALHLGRLKDAGTLRPEQ------ 330

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K    + A A+  EA   +GG+G   + S  RH     +     G+     L +L
Sbjct: 331 -ISLGKLNNVREALAIAREARTILGGNGITLDYSPLRHASNLESVRTYEGTDEVHTL-IL 388

Query: 456 NLLEKGTNLFE 466
                G   F 
Sbjct: 389 GQHITGIGAFR 399


>gi|116694855|ref|YP_729066.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113529354|emb|CAJ95701.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
          Length = 394

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 120/362 (33%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + RRS   G + +             +   +   +     L+A    S S  +A ++ 
Sbjct: 46  RKVWRRSSELGFYAA---------CLPTSLGGKGLNIQEQCALKADLAASGSTLAAHVLG 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P    +   K  + +       P+ +   +    LTE   G+D  +I +      D
Sbjct: 97  DLGGPPRVGNML-KYATPDQLKRYFEPVIRGEKSTCFALTETHSGSDAQSIRTSAVADGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNR 282
            +    G  +   +P +D  I++   +       +  +L D    G+        + G  
Sbjct: 156 ELVINGGKHYISGAPFADFAIVMCVTDATTTPPAITAVLVDLDLPGVTVSNEYVPMSGQH 215

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM-----SVSGMRVSLAEAI 336
                ++ F N         N+  G     K+ +  ++   +      +     +   ++
Sbjct: 216 --IDGDIRFENVRVP---RANIFGGEGNGFKLGMSRINVNRLLHCPSMLGLATRAYESSV 270

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA +R   GG +     ++  +AD+A  + A  ++            + ++  A  R+ 
Sbjct: 271 AYAGQRRQFGGPIARFQAIQHMLADMAAALWACESMITHT-------AALADAGADLRMK 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +  +    V  +A++  G  G      + + +R+     I  G+       +  
Sbjct: 324 AAACKLFVSERCFEVADKAVQIHGNVGVTRGHPVEQTFRKLRMFRIFTGTSEIQRNTIAR 383

Query: 457 LL 458
            +
Sbjct: 384 AI 385


>gi|76809526|ref|YP_332119.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|76578979|gb|ABA48454.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710b]
          Length = 655

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 110 DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 169

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 170 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 215

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 216 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 275

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 276 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 335

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 336 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 394

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 395 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 454

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 455 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 514

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 515 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 574

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 575 MFGLVACAWALLEAA--CIAERRLATR 599


>gi|111017780|ref|YP_700752.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110817310|gb|ABG92594.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 387

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 117/346 (33%), Gaps = 29/346 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASM 161
              L      G   ++    +  +    A    +        A       +   +   + 
Sbjct: 39  WEFLTAFAEGGWLGALIPEEYGGLGLGLAECGVMMQEIAASGAGASGASAVHFYLFPPAP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  + + + PK+   E             + +  G+TE   G D + IT++ +K+
Sbjct: 99  IIRHGSEEMKQQFLPKLARGE-------------ILMAFGVTEPTAGVDTSRITTKAEKV 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNK 278
           + G        W  ++  +   ++LA+   R        +     D   + +  + ++ K
Sbjct: 146 AGGWVVNGQKVWITNAQNAHKILLLARTSARNEERPLDGMTLFFTDLDRDRITIREIE-K 204

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G  +  + EL   N       ++G+       + D      +   +  V   + +L  A
Sbjct: 205 LGRSAIDSNELFIENLEVRDDEVVGEAGRGFSYLIDGLNSERIVVGLEGVGIGQAALELA 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R V    +     +   +AD  + + +A  ++   A  +D  +   +EAA    
Sbjct: 265 TKYATERVVFDRPIGQNQAIAHPLADSWIRLESARLMAMHAAELYDNHQDCGKEAAG--- 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               TKY   +        AM   GG  Y +E  + R +RE+    
Sbjct: 322 ----TKYLGAEAGFDACDRAMSTHGGYAYAKEYHVERLWREARLLR 363


>gi|282936094|gb|ADB04304.1| putative naphthyl-2-methyl-succinyl-CoA dehydrogenase [bacterium
           enrichment culture clone N47]
 gi|308272806|emb|CBX29410.1| (R)-benzylsuccinyl-CoA dehydrogenase [uncultured Desulfobacterium
           sp.]
          Length = 411

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 123/385 (31%), Gaps = 31/385 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
                LL+++   G      +  F                 ++A+      M   +   S
Sbjct: 49  EDHQRLLQKAKELGFWGLEVEEKFGGQGLG-----------MLAKTLVVEEMCKCLVGFS 97

Query: 161 MVALMTTPRVHK-DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             A    P      +     S         P     +   +  TE   G+D++ + ++  
Sbjct: 98  PHAFTLPPDAPNLYYLNDCCSEVQREKYYKPYCDGKLDSAMACTEPGAGSDVSGLKTKAV 157

Query: 220 KISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQR 274
           K  D  + ++G K F S    D     FI++A  +            L D    G+   R
Sbjct: 158 KKGD-KWVINGTKTFTS--KCDYPSVFFILIAVTDSEASSKNKFTAFLIDREHPGVRIGR 214

Query: 275 LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
               IG  +  T +L   +       +LGD+  +  P+++   +  ++ A          
Sbjct: 215 EIPVIG--AMPTWDLILEDVEVGDDAVLGDVGKAFVPLQNRFGVRRIELASRCTGMAERL 272

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +   I  A  R   G  L ++ V++  IAD  +++ +   L +  A   D+         
Sbjct: 273 IQMMIDQANNRVTFGKPLAERGVVQNWIADSTIELESVRWLLYYAAWKSDQGYKD----- 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             RI     K    +M   +   A++  GG G   E  I    R      IL G      
Sbjct: 328 -LRIEGASVKVAATEMLTRIADRAIQVHGGLGVSSELGIEHVARMVRIWRILEGPSEIHR 386

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDL 476
             V   +     ++       ++D+
Sbjct: 387 WLVARQILGQKKIYSPFVVAKDEDI 411


>gi|241763352|ref|ZP_04761408.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367504|gb|EER61803.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 550

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 126/367 (34%), Gaps = 36/367 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G+        +  +   +            A + AG L + S  +A ++    T    
Sbjct: 205 ELGVFGVSISGDYGGMGLGKRAMCIVTEELSRAWIAAGSLGTRSEIAAELIGCGGTAAQK 264

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            +W PKI S E  PT                TE   G+D+ A+ ++  +++ G + + G+
Sbjct: 265 SEWLPKIASGEVLPTAV-------------FTEPDTGSDLGALRTRATQVTGGGWRIDGN 311

Query: 232 KWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPN---------GLCYQRLKNKIG 280
           K +++    SD   +L + E G      +   L               G+    +   +G
Sbjct: 312 KTWITHASRSDLMTLLTRTEPGSTDHNGLSMFLAPKPRGTKAQPFPASGMSGGEIP-VLG 370

Query: 281 NRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R     +L F        G L G        +        + +A  +V     +   A 
Sbjct: 371 YRGMKEYDLAFDGFEVGAEGLLGGVRGQGFRQLMQTFEGARIQTAARAVGVAWRAFDLAW 430

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  +I+ P +   +A +  +      LS   A   D       EA  A+++
Sbjct: 431 RYANDRKQFGAPIIEFPRVADKLALMIAETVLVRELSHFAAEEKDRGIRCDVEAGMAKLL 490

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A        ++A +     ++  GG+GY  E  I+R   ++   +I  G+       +  
Sbjct: 491 AA-------RVAWSNADNGLQIHGGNGYALEFEISRVLCDARILNIFEGAAEIQAQVIGR 543

Query: 457 LLEKGTN 463
            L  G+ 
Sbjct: 544 GLLAGSR 550


>gi|148558732|ref|YP_001257744.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
 gi|148370017|gb|ABQ62889.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840]
          Length = 386

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 129/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P  +  +      G    +    +       +    A    +      G  
Sbjct: 28  RKIDREMAYP--NEFVNALTEAGWLSILIPEEYGGAGLPLS-AAAAVLEEIQKSGCNGGA 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    + +    + PKI S E                  G+TE   GTD 
Sbjct: 85  CHAQMYTMGTLLRHGSDKQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 133 GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 191

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 192 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 248

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    ++++YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 249 AAECIGDAKWFTQKSVNYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 308

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 309 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 361

Query: 441 SI 442
            +
Sbjct: 362 QV 363


>gi|94314052|ref|YP_587261.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93357904|gb|ABF11992.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 391

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 114/365 (31%), Gaps = 23/365 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             + RRS   GL+ +             A             L+A    S +V +  ++ 
Sbjct: 46  RNVWRRSSELGLYAACLPVELGGKGLNIAE---------QCALKADLAASGAVLAPHVLG 96

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
            +  P    +   K  + +       P+ +   +    LTE   G+D+ +I +      D
Sbjct: 97  DLGGPPRVGNML-KYATPDQIERYFQPVIRGEKSTCFALTETHSGSDVQSIRTSAVVDGD 155

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNR 282
            +       +   +P +D  I++   +       +  +L D    G+        + G  
Sbjct: 156 DLVINGEKHYISGAPFADFAIVMCVTDAATAPPSITAVLVDLDLPGVTVSTEYVPMSGQH 215

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                ++ F N       + G              +  L      +     +   ++ YA
Sbjct: 216 --IDGDIRFENVRVPRANIFGGEGRGFKLGMSRINVNRLLHCPSMLGLAMSAYKASVQYA 273

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   GG +     ++  +AD+A  + A  ++  + A   D         A  R+ A  
Sbjct: 274 GARRQFGGPIARFQAIQHMLADMAAALWACESMIAQTAMLADAG-------ADLRMKAAA 326

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +  +    V  +A++  G  G      + + +R+     I  G+       +   + 
Sbjct: 327 CKLFVSERCFEVADKAVQIHGNVGVTRGHPVEQTWRKLRMFRIFTGTSEIQRNTIAKAIL 386

Query: 460 KGTNL 464
             T  
Sbjct: 387 DPTGA 391


>gi|262196146|ref|YP_003267355.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262079493|gb|ACY15462.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 391

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 120/371 (32%), Gaps = 37/371 (9%)

Query: 97  VEFHPAWHALLR-------RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
           + F  AWH   +            G    +    F             A           
Sbjct: 24  IPFADAWHRDQQMPPSVIGTLAERGYLGLVIPEEFGGRGVGPVALGLLAGELGRGCSSLC 83

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L++        +    +    K W P++ S               V   L LTE   G+
Sbjct: 84  SLLTVHTMVGWAITRWGSAPQKKRWLPELASG-------------RVLGALALTEPDTGS 130

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  ++ +  Q+    +       W      +D F++  + E          +L +    G
Sbjct: 131 DAKSVRTSVQRHGTELALDGHKSWVTYGQSADLFLVFGRAEEGP-----AAVLVERDRKG 185

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           L  + + + +G R++ T  L           +L    G          LDS   +V+   
Sbjct: 186 LRTEPISDLLGLRASMTASLRLEGARVPTDAELGRP-GMGIAQIAATALDSGRYTVAWGC 244

Query: 330 VSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V +  A       Y+ +R   G  L D  ++ R ++++  D+ AA  L           +
Sbjct: 245 VGILRACTEACVAYSAQREQFGAKLKDHQLISRMVSNMFTDLRAAELLCLEAGQL----R 300

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +R +  A A     I KY+    A     +A++  G +G   +  + R++ ++    I+ 
Sbjct: 301 ARKDPGALA--ATSIAKYFASTAAVRAANDAVQLHGANGCSGDFPLQRYFGDAKVMEIIE 358

Query: 445 GSGNAMVLDVL 455
           GS     L + 
Sbjct: 359 GSSQIQQLVIA 369


>gi|195454681|ref|XP_002074352.1| GK24068 [Drosophila willistoni]
 gi|194170437|gb|EDW85338.1| GK24068 [Drosophila willistoni]
          Length = 413

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 123/310 (39%), Gaps = 32/310 (10%)

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V   + + S  G+ +   + K+G +++ T E+ F +    +    NV     +  K+ + 
Sbjct: 1   VTAFIVERSFGGVSHGPPEKKMGIKASNTAEVYFEDVKIPI---ENVLGKEGDGFKVAMN 57

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L++    +       M+  +  A  +A  R   G  L +   +K  +A +++   A  +
Sbjct: 58  ILNNGRFGMGATLSGTMKRCIDIATAHANNRAQFGQKLKNYGSIKEKLAQMSILHYATES 117

Query: 372 LSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           ++F ++   D   +    EAA       I+K +  + A  V  EA++ +GG G+++E  +
Sbjct: 118 MAFTISQIMDSGSQDYHLEAA-------ISKIYASESAWYVCDEAIQILGGMGFMKEAGV 170

Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL--FEQLFSTLEQDLGSSGKKVITI 486
            R  R+     I  G+ + + L V    +   G++L   ++ F     +LG   K+    
Sbjct: 171 ERILRDLRIFRIFEGTNDILRLFVALTGIQYAGSHLTDLQRAFKNPSANLGLIFKEASRR 230

Query: 487 LRDSISL---------CKEDKGLARFLTEKIALASSAA--ALYRAGMNDIADVFLENRFL 535
              SI L           E K  A+     I +        L +   N + + F+ N   
Sbjct: 231 AASSIGLGGVDLNSHVVAELKPYAKNTAVCINVFGQTVEELLLKYKKNIVNEQFVLNCLA 290

Query: 536 DNCHSTHCML 545
           +     + M+
Sbjct: 291 NAAIDIYAMV 300


>gi|78222735|ref|YP_384482.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15]
 gi|78193990|gb|ABB31757.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens
           GS-15]
          Length = 410

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 126/402 (31%), Gaps = 35/402 (8%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH---KIRAAR 139
           +L  +   G      +       L++++   G      D  F             +    
Sbjct: 35  ELSLWTEPGHLIPDEDH----KRLMQKTKELGFWGLEVDEEFGGQGLGMLAKTLVVEELS 90

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             L+     G  + P   +   +     PR  + +               P     V   
Sbjct: 91  KSLVGFSNHGFTLPPDAPNLYYLHECCGPRQREKY-------------FVPYCNGDVDSA 137

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCF- 256
           +  TE   G+D++ + ++  K  D  + ++G K F+S    D   FI++A  +       
Sbjct: 138 MACTEPGAGSDVSGLKTKAVKKGD-KWVINGTKSFISKCDYDNVFFIVIAVTDPSASTKD 196

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMK 313
                L D    G+   +    IG     T +L   +       +LGD+  +  P+++  
Sbjct: 197 RFTAFLIDREHPGVRIGKEIPVIG--PMPTWDLILEDVEVDDDAILGDVGKAFIPLQNRF 254

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
            +  ++ A          +   I  A  R   G  L ++  ++  IAD  +++     L 
Sbjct: 255 GVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWIADSTMELEQVRWLL 314

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D+           RI     K    +M   V   A++  GG G   E  I   
Sbjct: 315 YYAAWKSDQGHKD------LRIEGASVKVAATEMLTRVADRAIQIHGGLGVSHELGIEYV 368

Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
            R      I+ G        V   L K    +       +++
Sbjct: 369 ARHVRLWRIVEGPSEVHRWLVARQLLKEKKPYNPFIVAADEE 410


>gi|316936039|ref|YP_004111021.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315603753|gb|ADU46288.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 388

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 120/364 (32%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQ 145
                + D+    P  H   +     G        ++              R      A 
Sbjct: 25  DAYWLKKDREGGFP--HDFHKALADAGWLGICVPEAYGGSGLGITEAAIMMRTISESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V   + V +  T    +   P             PM +        +TE 
Sbjct: 83  MSGASAVHINVFGLNPVVVFGTEEQRRRMLP-------------PMVEGRDKACFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + ++  +  D         W  ++ +++  ++LA+       +     +   
Sbjct: 130 NTGLNTTQLKTRAVRKGDRYVVNGQKVWISTAQVANKILLLARTTPLEEVKSPTHGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
             D     +    ++ K+G +   + EL F +    +   +G+       + +      +
Sbjct: 190 YADFDRTRIKVHEIE-KMGRKIVDSNELFFEDFEIPVEDRIGEEGKGFHYILEGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  +V   +++L+ A  YAR R V    +     ++  +A   +++ AA  +    A 
Sbjct: 249 LIAAEAVGLGKLALSRAADYARTRIVFNRPIGQNQGIQHPLAKNWVELEAAWLMVMSAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+  +    A  A+ +A    +  C+       +A+   GG GY +E  + R+ RE  
Sbjct: 309 QYDQGMACGAAANAAKYLAGEAGFQACE-------QAVMTHGGFGYAKEYHVERYLREVM 361

Query: 439 ANSI 442
              I
Sbjct: 362 IPRI 365


>gi|284990335|ref|YP_003408889.1| glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
 gi|284063580|gb|ADB74518.1| Glutaryl-CoA dehydrogenase [Geodermatophilus obscurus DSM 43160]
          Length = 395

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 129/367 (35%), Gaps = 29/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      L+ +    G+     +    P +   +  + AA L             
Sbjct: 42  WERAEFP---FELVPKLAELGIAGGTIEGYGCPGMSNVSAGLVAAELARADGSVGTFNGV 98

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A++      + W P              M +       GLTE   G+D   
Sbjct: 99  HSFLAMQSIAMLGDEEQRERWLP-------------AMARLEKVGAFGLTEPAHGSDAVG 145

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  ++  D        KW  +  ++D  ++ A+ E       V   + D    G   +
Sbjct: 146 LETFVRRDGDSYVLNGQKKWIGNGTIADHVLIWARGEDGA----VGGYVVDKGTPGYEAR 201

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVS 331
            +  K   R+    E+  S+        L       +  ++L       A  ++     S
Sbjct: 202 VMTGKTALRAVWQAEITLSDVRVPAENRLANCHSFKDVSQVLDRTRYTVAWRALGLATAS 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ +A RR   G  +    +++  +A +  +I A   + +RL+   D  +       
Sbjct: 262 YELALAHALRREQFGQPIAGYQLVQDKLARMLAEITAMQLMCWRLSKLADAGR------- 314

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
               MA + K      A A++A+A + +GG G + +  +ARH+ +  A     G+ +   
Sbjct: 315 MTAAMASLAKMNHAAKARAIVADARDILGGDGILIDHHVARHHADMEAVFTFEGTDSVQA 374

Query: 452 LDVLNLL 458
           L V   +
Sbjct: 375 LIVGREI 381


>gi|330824458|ref|YP_004387761.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329309830|gb|AEB84245.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 379

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 122/363 (33%), Gaps = 32/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +    +    G    +                           +       S  +A  + 
Sbjct: 39  YEAYEKVARMGWLRLLVPEENGGDGGSIFDYALMCEGLARYGFDFATAFMVSTFTAMNIC 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    + + P                K  +   + ++E   G+D A   ++ ++  +
Sbjct: 99  KFGTREQQERFLPAF-------------MKGDIRFSISISEPSAGSDAANTRTRSEETPE 145

Query: 224 GIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G        W   +   +  I ML + +        +  LL      GL  +RL   +  
Sbjct: 146 GWRITGQKLWCSGAAARNTVIAMLTRSDKAAAKHKGLTVLLVPNDTPGLDIRRLPT-MAR 204

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----A 335
           R+  T E+        ++   N+   P +  KI+  +L+   ++VS   V  A+     A
Sbjct: 205 RATGTTEIFADGA---VVPPANLLGQPGDGWKIITDHLELERIAVSAAYVGNAQQAVSDA 261

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R      + D  V++  +AD+   + AA  + +R A+     +    E + A++
Sbjct: 262 LKYAHERIQFDKPIYDFQVIRHMLADMQTAVDAARLMVYRAADMASRGEPCQREVSMAKL 321

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           +A  T          V    M+ +GG   + E  + R++RE   ++I  G+       + 
Sbjct: 322 IASETLQ-------TVTRNGMQILGGHSMLPEADMERYFREGMQSTIGGGTSQIQRTLIA 374

Query: 456 NLL 458
             L
Sbjct: 375 KSL 377


>gi|320031703|gb|EFW13662.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 447

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 116/345 (33%), Gaps = 26/345 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
              +    DG         F       A  I  A + +    E+G  M  + +    +  
Sbjct: 99  DFQQALARDGWLGICLPTEFGG----AALGISEAAVMMQTISESGAGMGGASSVHMNI-F 153

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
              P V      K  S E       P+ +       G+TE   G D   + S   K  D 
Sbjct: 154 GLEPVV------KFGSEEQKTRFLPPLIEGKERACFGVTEPNSGLDTLKLRSMATKDGDH 207

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                   W  ++  ++  ++L +             +     D   + +    +  K+G
Sbjct: 208 YILKGSKVWISTAQNAEKILILVRTTPVDKVAKPSLGLSLFYTDLDRSQVEVTEIP-KMG 266

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +  T  L F +       ++G+ +     +        +  A  ++     +L  A  
Sbjct: 267 RAAVDTNTLFFEDWRVPAEDMIGEEDNGFKMIMHGMNAERILIAAEALGLGYAALRRAAV 326

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R V G  +     ++  +AD  + + AA  + ++ A+ +D   +  E A  A+ +A
Sbjct: 327 YASERQVFGRPIGKNQGIQHPLADSWMQLEAARLMVYQAASLYDAGHATGEYANAAKYLA 386

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +  C+ A       +   GG GY +E  + R+ RES    I
Sbjct: 387 AEAAFRACERA-------VMSHGGMGYAKEYHVERYLRESFIPRI 424


>gi|116622186|ref|YP_824342.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116225348|gb|ABJ84057.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 562

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/435 (16%), Positives = 132/435 (30%), Gaps = 51/435 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+        +                     L     +  +   +  + +  TP   K 
Sbjct: 51  GIQLLFIPEEYGGFGGGAFDVYCVCEEMARIDLGIATAVLATFLGSDPITVGATPEQKKI 110

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-----IYCL 228
           W  +I              +  +    G TE   G+D+ A+ +   ++ +G         
Sbjct: 111 WLSRI-------------AEEGILFAYGATEPDAGSDLGALQTTADRVLEGERVVGYRIN 157

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              +W  +  ++DA+ +LA        F+V     D    G    R ++K G R + T  
Sbjct: 158 GSKQWISNGGIADAYTVLANTPTGPSWFIV-----DRGAQGFTQGRPEDKHGIRLSNTAA 212

Query: 289 LEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           L F++        + G         + +     L  A   +     +L  AI Y+ +R  
Sbjct: 213 LSFTDVTVPADRLVGGVEGQGLLQAQAVFGYTRLMVAAFGLGAGWAALDRAIPYSAKRIQ 272

Query: 345 SGGILIDQPVMKRAI-ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           +G  L ++      +     + + AA A     A   D  +              I KY 
Sbjct: 273 AGTPLSEKQGYTHKLIVPHVVRLEAARASIEETAARIDAGEGS------LNTEGAIAKYM 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-----LL 458
             +   A    A++ +GG GY  E  + +  R+     I  G+   M + +        L
Sbjct: 327 ATEAGNAAAEAAIQALGGYGYTHEYLVEKISRDVRITIIYEGTSEIMEMTISRDRWQLHL 386

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR------------FLTE 506
           +     +      LE    +            +    E    AR             + E
Sbjct: 387 KTRGKHYHDQARELEALHAAHPNVGAGCAGLVMHALAEVMERARAGRLTRDQHILLRMGE 446

Query: 507 KIALASSAAALYRAG 521
            IA A SA +L R  
Sbjct: 447 WIAYAESAGSLARRA 461



 Score = 37.2 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSL-AEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                 +  + L  L +A  +V      L   A+     R  +G +  DQ ++ R   + 
Sbjct: 389 RGKHYHDQARELEALHAAHPNVGAGCAGLVMHALAEVMERARAGRLTRDQHILLRM-GEW 447

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECI 419
                +A +L+ R A   +E K   + +    A  +A I++ +  + A  V  E +  I
Sbjct: 448 IAYAESAGSLARRAA-LLEEGKLSEKASQRFDAVSLAAISRIFAREAALRVAQEGLRWI 505


>gi|46198743|ref|YP_004410.1| glutaryl-CoA dehydrogenase [Thermus thermophilus HB27]
 gi|46196366|gb|AAS80783.1| glutaryl-CoA dehydrogenase [Thermus thermophilus HB27]
          Length = 385

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 120/371 (32%), Gaps = 30/371 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGH 150
             W +    P    L+ R    G         +    V   A+ +    L  +       
Sbjct: 35  RDWWEEGVFPTH--LIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSF 92

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    +    +++ PK+   E                  GLTE  GG+D
Sbjct: 93  VSVQSSLVMYPIYAYGSEEQKREFLPKLARGEM-------------VGCFGLTEPDGGSD 139

Query: 211 I-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               + ++ ++  D         W  +  ++   ++ A+ EG      V   L      G
Sbjct: 140 PYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEGGE----VLGFLVPTDTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              + +K K+  R++ T EL            L  + G    +  L       A  ++  
Sbjct: 196 FQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCLTQARFGIAWGAMGA 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +     EA+ +A+ R   G  L  + +++  +A++         L++RLA   DE K   
Sbjct: 256 LEAVYEEAVAFAKSRQTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTP 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            + + A+        W    A      A + +GGSG   E    RH           G+ 
Sbjct: 316 AQVSLAKRQ----NVW---KALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYEGTH 368

Query: 448 NAMVLDVLNLL 458
           +   L +   +
Sbjct: 369 DVHTLVLGREI 379


>gi|328951098|ref|YP_004368433.1| Glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
 gi|328451422|gb|AEB12323.1| Glutaryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884]
          Length = 386

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 126/380 (33%), Gaps = 35/380 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            + W++  F      L+ R    G   +    ++     + ++      +Y + ++++G 
Sbjct: 35  AQWWEEGVFP---KHLIPRFGEMGFLGANLPSAYG--AAEVSNVAYGLIMYELERVDSGL 89

Query: 151 LMSPSVTSASM---VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               SV  A +   +    +    + + P++                 +    GLTE  G
Sbjct: 90  RSFASVQGALVMYPIYAFGSEEQKQRYLPEL-------------AAGRLVGCFGLTEPDG 136

Query: 208 GTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  A + ++ ++  D         W  +  ++D  I+ A+ E  V    V   +    
Sbjct: 137 GSDPDANMKTRARRDGDHYVLSGTKMWITNGNIADIAIIWAKDEEGV----VRGFIVPTD 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMS 324
             G     +K+K+  R++ T EL            L  + G    +  L       A  +
Sbjct: 193 APGFTANEVKHKMSLRASVTSELVLDEVRVHKDQMLPKAQGLRAPLACLTQARYGIAWGA 252

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  +     EA+ +A  R   G  +  + +++  + ++         L++RL    D  +
Sbjct: 253 MGALEAVYTEALEFASSRVTFGRPIAARQMVQHKLVEMLTAHTQGLLLAWRLGRLKDAGR 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                         + K    + A      A E +GG+G   E    RH           
Sbjct: 313 -------LTYTQVSLAKRQNVRAALQAARTAREILGGNGITLEYHAIRHMLNLETVDTYE 365

Query: 445 GSGNAMVLDVLNLLEKGTNL 464
           G+ +     V   +     L
Sbjct: 366 GTHDIHTFIVGRDITGKNAL 385


>gi|289751377|ref|ZP_06510755.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T92]
 gi|289691964|gb|EFD59393.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T92]
          Length = 214

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 10/219 (4%)

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            I++AQ +   G      L+ +    G    R  +KIG  +  T EL F++        L
Sbjct: 1   MIVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLL 60

Query: 303 N-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
                G +  M+ L    +  AIM+ +GM   L + + YA+ R   G  +      +  +
Sbjct: 61  GQEGMGFIYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLL 120

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A++A +      +           K  +E+AA A+        +  +    +    ++  
Sbjct: 121 AELATEATVVRIMVDEFIKLHLAGKLTAEQAAMAKW-------YATEKQVYLNDRCLQLH 173

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GG GY+ E  +AR Y +S   +I  G+   M   +   L
Sbjct: 174 GGYGYMREYPVARAYLDSRVQTIYGGTTEIMKEIIGRGL 212


>gi|325833275|ref|ZP_08165781.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|325485657|gb|EGC88125.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 384

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 121/361 (33%), Gaps = 26/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +       G         +  +   +   +      L       H++  +  +A  +  
Sbjct: 41  EIAEAYRDAGFGLMGIPEEYGGIPCDKV-TLGMMIEELYHSSGCNHILYQNSLTAFDIVE 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             TP   + +              A M+       L ++E   G+D   ++   +K  DG
Sbjct: 100 FGTPEQIQKYMD------------AYMETGWPLCSLSISEPGAGSDNRNMSCTAKKQDDG 147

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y L+G K +++        I++A+  +       +   + +    G+    L +KIG +
Sbjct: 148 TYRLNGQKTWVTMGAKLPYTIVVAKDEDPSRENDKMSLWMIEMDRQGVSTAGL-HKIGQQ 206

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYA 339
                E+ F +        +     G +  MK      + +++  +   + ++ +A+ YA
Sbjct: 207 CIPFCEVYFDDVVLTEEDRVGTPGEGFMMVMKNFEVERALLVAEQLGLAQAAMEDAVTYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R      + +  + +  + ++ + +     + ++     D   S   ++A  +     
Sbjct: 267 NQRIAFNKPIANFQMTQEKLTEMEIRLQNTRNMLYKTLWELDNDISVQLDSALLKR---- 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              + C     V   A+   GG GY  E  + R + +   N    G+   M       + 
Sbjct: 323 ---YGCTECFNVADMALSIFGGIGYTTEVRVGRIWADCRGNLFGGGTPEIMAYIAGRQVA 379

Query: 460 K 460
           K
Sbjct: 380 K 380


>gi|320335659|ref|YP_004172370.1| glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
 gi|319756948|gb|ADV68705.1| Glutaryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211]
          Length = 386

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 119/375 (31%), Gaps = 38/375 (10%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS- 158
           H     L++R    GL          P     A    AA   +M +LE       S+ S 
Sbjct: 42  HAPTRDLMQRFGALGLLG-----PKTPEAYGGAGASSAAYGVMMYELERADSGLRSMASV 96

Query: 159 -----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   +    +    + + P++                 +    GLTE  GG+D  A
Sbjct: 97  QGSLVMYPILAYGSDAQRRRYLPEL-------------AAGRLIGCFGLTEADGGSDPGA 143

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + ++ ++            W  +SP++D  ++ A+ +       V   L D    GL   
Sbjct: 144 MRTRARRDGQHYVLNGTKMWITNSPLADVALVWAKDDDGH----VRGFLVDRDTPGLHTP 199

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
            ++ K+  R++ T E+   +        L  + G    +  L       A  ++  +   
Sbjct: 200 TIERKMSLRASTTGEVVLDDVRVPAEQMLPDARGLKGPLSCLTQARYGIAWGALGALEAV 259

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
            A  + Y   R   G  L  + +++  +  +         L+ RL    D         A
Sbjct: 260 YAATLAYTTERTTFGRPLAARQLVQDKLVGMLTAHTTGLLLAARLGQLADAG-------A 312

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K    + A      A E  GG+G   E  + RH           G+ +   
Sbjct: 313 LTPAQVSLGKRTNVRAALNAARAARELHGGNGITTEYPVIRHMLNLETVDTYEGTHDVHT 372

Query: 452 LDVLNLLEKGTNLFE 466
           L V   L  G N  E
Sbjct: 373 LIVGRDLT-GLNALE 386


>gi|163792887|ref|ZP_02186863.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
 gi|159181533|gb|EDP66045.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199]
          Length = 377

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 120/368 (32%), Gaps = 36/368 (9%)

Query: 88  GPGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLY 141
              G+ +    D+    P  H   R     G        +         +A  +      
Sbjct: 10  DRFGDDYWRKADETASFP--HEYARAIAEGGWLGIAMPENVGGAGLGLTEAALMMERLAN 67

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               + A   +  ++     V +  T +  + + P             P+   +     G
Sbjct: 68  SAGAMAAASSIHINIFGLHPVVVFGTEQQQQRFLP-------------PLIAGTERACFG 114

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFL 257
           +TE   G D   + +   +  D         W  ++  +D  +++A+             
Sbjct: 115 VTEPDAGLDTGRLKTMAVRDGDIYRITGRKIWTSTAQEADRVLIIARTSPVEATPKPTDG 174

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKI 314
           +         + +  + + +K+G  +  +  L        +   +G+       +     
Sbjct: 175 LTLFYAPLDRSKVEIRAI-HKMGRHAVDSNMLFIDGLEVPVEDRIGEEGQGFRCLLHGLN 233

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +  A  ++   R +L+ A+ YA+ R V G  +     ++  +A+  +++ AA  +  
Sbjct: 234 PERILIAAEAIGVGRQALSRAVTYAKERVVFGRPIGQNQGIQHPLAENWMELEAAWLMVL 293

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A  +D  +    EA  A+ +A    +  C+ A       +  +GG GY  E  + R  
Sbjct: 294 RAAALYDAGQPCGAEANSAKYLAAEAAFKACERA-------VMTLGGMGYAAEYGVERLL 346

Query: 435 RESPANSI 442
           RE     I
Sbjct: 347 REVLITRI 354


>gi|119184337|ref|XP_001243090.1| hypothetical protein CIMG_06986 [Coccidioides immitis RS]
          Length = 440

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 80/445 (17%), Positives = 160/445 (35%), Gaps = 48/445 (10%)

Query: 36  AYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
            +S    L  L + + +  H+  +          L+  A E  R +         +G   
Sbjct: 10  PFSEPPYLCGLPSPYYTDAHRAFQKRCRAFLWENLNKHAMEWERDSQVPEHVFETFGKHN 69

Query: 92  ERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +        L R  IHD  G+    WD  +  +   +      AR  L       
Sbjct: 70  MLLPNLPSPLPVDWLKRLDIHDILGVKVEDWDLVYTGIYLDEM-----ARSGLHGPPS-- 122

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L +        +    + ++ + + P+  +                 + + +TE   G+
Sbjct: 123 SLTAGLAFGIPPIIKFGSEQLKERFLPEFLTC-------------KKRMCIAITEPDAGS 169

Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G  G   +  ++    + 
Sbjct: 170 DVANITTTAEKTADGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGASGLSIVVVPLKNY 229

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  +R     G  ++ T  +E  +       L+G+  +    +        L  A+  
Sbjct: 230 PGVSMRRFYVS-GQTASGTTYIELDDVKVPVENLIGEEGLGMKYIMTNFNHERLTIAVGV 288

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRLANS- 379
               RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ +  A      ++L +  
Sbjct: 289 TRQARVALSSAFEYCIKREAFGKTLMDQPVVRHRLAKAGAELESMWAWVEQFLYQLKHMP 348

Query: 380 FDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYR 435
            DE   R     A A+  A +    C ++A       +   GG+G         + +  R
Sbjct: 349 KDEGDRRLGGLTALAKAKAGMVLNECSQVA-------VLLFGGNGLTRTGQGELVEKISR 401

Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460
           E     I  GS + ++   +  L K
Sbjct: 402 EVWGARIPGGSEDVLLDLSIRQLVK 426


>gi|326480348|gb|EGE04358.1| acyl-CoA dehydrogenase family member 9 [Trichophyton equinum CBS
           127.97]
          Length = 432

 Score =  183 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/455 (16%), Positives = 150/455 (32%), Gaps = 45/455 (9%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ----ELARMANYN 80
              P  +     YS D       + +    H++L       +         E        
Sbjct: 5   FGSPVPYAEPQWYSRD------CSPYHHESHRKLRAFVRDYVEMELMPYASEWEEQGFVP 58

Query: 81  TPQLHAYGPGGE-RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139
              +  +   G    D+ +  P +  +   S+  G+    WD     +V  + +++  + 
Sbjct: 59  DETVRRFAKNGFCIIDRSK--PEY--MGGISLPAGIAPGEWDVFHTLIVADELNRVGYSG 114

Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
                      L   +      +    T +   ++ P++   E                 
Sbjct: 115 -------PVWGLNGGNSIGCPPIMNFGTEQQKLEYLPRVARGEIR-------------FC 154

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259
           L +TE   G+D++ I +  +K+          KW +++ +   +   A   G  G   + 
Sbjct: 155 LRVTEPDAGSDVSGIKTVAKKVGSHYIVNGAKKW-ITNGIWADYCTAAVRTGGPGHGGIS 213

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            L+   +  G+  +R+ N  G  ++ +  LEF +       L+G  N     +       
Sbjct: 214 FLIIPLATEGVTRRRMFNS-GVHASGSTFLEFDDVEVPVENLIGRENEGFKYIMSNFNPE 272

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  A   +   RV + +A  Y+  R   G  L+   V++  I+ +   I    A   +L
Sbjct: 273 RLSLASACIRLSRVCVEDAFRYSTVRETFGKPLLANQVIRTKISKMGQLIEPCQAFMDQL 332

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARH 433
           A +   ++    +      M  + K    +    V  EA + +GG+GY    +   I   
Sbjct: 333 AYTIKTSEQAGRKVDI-GGMTALLKVMSTRCLEKVCREAQQIMGGAGYNKAGKGSRIEAI 391

Query: 434 YRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQ 467
            R+     +  GS   +  L V   L+    + E 
Sbjct: 392 SRDVRVYVVGGGSEEILRDLSVREELKHMRKVMEA 426


>gi|91778210|ref|YP_553418.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690870|gb|ABE34068.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 388

 Score =  183 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 130/383 (33%), Gaps = 33/383 (8%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L A  P   + D+ E +P WH +        L        +          +        
Sbjct: 20  LEAIAPHAAQTDRSEQYP-WHTVEAL-REQRLMGMTLPPEYGGKGASYFDTVLVIEELSK 77

Query: 144 AQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
               +G +M  S   A   +    +    +  A  + + +                 + +
Sbjct: 78  VCAASGRIMVESNMGAIGAIMKYGSDAQKQLAARLVLAGD--------------KPAICI 123

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRL 261
           TE + G+  + + ++ ++  D  +      W     +S    + A+ +E      +   +
Sbjct: 124 TEPQAGSAASDMQTRAERRGDTWHLSGCKHWITGGGVSKLHFVFARAIEDGKDTGIAGFI 183

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL------LGDLNVSTGPVEDMKIL 315
           +      G+  QR+   +G R      +EF +            G        + +    
Sbjct: 184 VVGPDVPGMTIQRIPA-MGIRGVPEARIEFDDMRVRHDMKVTPPGRTEAGFAGLMNAYNA 242

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             + +A +++   + +   A+ YA+RR   G  + +   ++  +AD+++ + AA  + ++
Sbjct: 243 QRVGAATVALGIAQGAFDLALDYAKRREQFGRPIAEFQGLQWMLADMSIQLEAARLMVWK 302

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A S  E  S           A   K    + A  V  +A++  G  GY  +  + R  R
Sbjct: 303 AAASGSEFPS--------MFAAAQAKIAAGEAAIKVTNDALQIHGAVGYGRDLPLERMVR 354

Query: 436 ESPANSILLGSGNAMVLDVLNLL 458
           ++   +I  G+   +   V   L
Sbjct: 355 DARMFTISGGTAQILRTQVAGTL 377


>gi|78060410|ref|YP_366985.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77964960|gb|ABB06341.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 390

 Score =  183 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 134/389 (34%), Gaps = 48/389 (12%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++  R + N    + H       + D+   +P   A +      G   ++  + +  
Sbjct: 13  QEIRDAVRGLCNQYPAEYH------RKIDEARGYPE--AFVTALTQAGWLAALIPQEYGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A +       +             +   + +    T    + + P+I + E    
Sbjct: 65  PGLSMA-EASVIMEEINRSGGNSGACHGQMYVMNTIVFSGTEAQKQRYLPRIAAGELR-- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                        +G+TE   G+D   + +   K  DG + ++G K ++S    SD  I+
Sbjct: 122 ----------VQSMGVTEPTTGSDTTKLKTTAVKK-DGRWVINGQKVWISRVQHSDLLIL 170

Query: 246 LAQVEG---------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293
           LA+             + CF+V   L+    NGL  + + N + N    T EL F N   
Sbjct: 171 LARTTPLDQVQKKSDGLSCFIVE--LDKAIGNGLTVRPILN-MVNH--ETNELFFDNLEL 225

Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG        + D         A   +      L +A  YA  R V G  +    
Sbjct: 226 PEDALLGTEGKGLKVIFDGLNAERTLIAAECIGDGYWFLEKARDYASERKVFGRPIGQNQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +A+  +++ AA  + +R     D  ++   EA  A+ +A    +           
Sbjct: 286 GIQFPLAESFIELEAANLMRWRACEKIDARQNAGVEANMAKYLAAKASW-------EAAN 338

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSI 442
             ++  GG G+  E  + R +RE+    +
Sbjct: 339 ACLQTHGGFGFACEYDVERKFRETRLYQV 367


>gi|146306754|ref|YP_001187219.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145574955|gb|ABP84487.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 387

 Score =  183 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 133/378 (35%), Gaps = 25/378 (6%)

Query: 88  GPGGERWDKVEFHPAWHALLR----RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
            P  +R   V   P   +LLR    RS   G + ++   +        A         L 
Sbjct: 24  DPLAKREGIVWGEPVAKSLLRDIWSRSCELGFYNAMLPHALGGAGLGVA--------DLC 75

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A  EA  L    +    +  L   PRV   +  K+ ++    T   P+ +   A+   LT
Sbjct: 76  ALKEAAVLTGSPLAPHILGELSGPPRVGHLF--KVANQHQVETFLGPICRAEKAVCFALT 133

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D  AI ++ +   +        ++   +P +D  ++LA      G   +     
Sbjct: 134 EAEAGSDATAIGTEARLEGEHYVLNGAKRYISGAPYADLAVLLAVTGPGRGPQGISAFFI 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           D    G+      + +     A   +   +    +   +       +     I L+  + 
Sbjct: 194 DLHAEGVSIDIDYSVMSG-GGAHGNILLRDVRVPVANRIGEEGAGFKLAMGRITLNRLLH 252

Query: 324 S---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
               +    ++L  ++ YAR R   G  +     +   +AD+A ++ AA ++ +  A   
Sbjct: 253 CPTMLGMAGLALNLSLDYARTRKQFGQPIAMFQSINHMLADMATELYAARSMMYATAAHN 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       +       AP+ K +  + A  +   A++  GG+G I+   +   +R S   
Sbjct: 313 DAGGDIKVQ-------APMCKLYASETAFRIADRAVQIHGGAGLIKGHPVEWIFRASRMM 365

Query: 441 SILLGSGNAMVLDVLNLL 458
            IL G+       +   +
Sbjct: 366 RILTGTSEIQRNTIAKGI 383


>gi|256827295|ref|YP_003151254.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
 gi|256583438|gb|ACU94572.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
          Length = 398

 Score =  183 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 111/322 (34%), Gaps = 17/322 (5%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           E        +      A     R+  D+  +    E  P      Q  SV     +TE+ 
Sbjct: 77  EEFSRGPGGMRMHLHHAADMNWRILDDYGQQEVKDELMPLF----QDKSVYCNFAITEQT 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV-GCFLVPRLLED 264
           GGT  A I +  +K  DG + L+G KW +S      +  ++A  +        +   L  
Sbjct: 133 GGTG-ADIHTTAEKQPDGSWILNGEKWLISHTDCSDYTYVIAVSDPTKEKDDRLSAFLVP 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G     + + +G R      L F+N      +LLG              +  +  A
Sbjct: 192 NDAPGFEIVEMPHMMGCRGAGHAGLRFTNVKLEPKYLLGKEGQGMEVAIHSLSVSRVHIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + ++   +  L  ++  A  R   G  +  + ++K  IAD+ + I       +  A  +D
Sbjct: 252 MSNLGMAQRMLELSLKRANDRITFGKPIATRQMIKAKIADMQMMIHVLRTAIYDFARDYD 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESP 438
                     Y    A I K +       V  E +E  GG GY E+       R YR+  
Sbjct: 312 IDPKND----YITEKAAICKLFSIDTVKRVSDEMLEIFGGDGYFEDSPYGPTERLYRDCR 367

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
           A  +  G+ N   + +    + 
Sbjct: 368 AMWLEEGAPNVQRITIARECQN 389


>gi|313240839|emb|CBY33129.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 32/309 (10%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      + P I   E             +   L +TE   G+D+  I +   
Sbjct: 132 PYICSYGTDEQVDRYVPGIRDGE-------------IISCLCMTEPGSGSDVQGIKTNAV 178

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
           +  D  + L+G K F+S   M+D  I++A  +  V    + +   L D +  G    +L 
Sbjct: 179 RDGDD-WILNGSKVFISCGYMADMAIVVAVTDKNVSKAAYGISLFLVDTNLPGFEKGKLL 237

Query: 277 NKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
            KIG  S  T EL F++        L G+  V+ G    M  L    L  A+   + +  
Sbjct: 238 KKIGRASADTAELFFNDVRLPGNAVLGGEEGVNRGFQFLMHDLGRERLLVAMGCTAQLEK 297

Query: 331 SLAEAIHYARRRHVSGGILID-QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                  Y+        I+   +  ++  +A++  +      +  R     D+       
Sbjct: 298 GFELTRQYSSF-SPFISIIFTIEKNLRHTLAEVKTE-----CMVLRAIT--DKHIEAYAN 349

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
               +    + KY+  +       +  +  GG GY+ E  IA+ +  +   SI  G+   
Sbjct: 350 GDLDQQSVSMLKYYVSEKMIENTTKLQQLWGGYGYMLEYPIAQIFAGARVESIYAGTTEI 409

Query: 450 MVLDVLNLL 458
           M   +   L
Sbjct: 410 MKELIARTL 418


>gi|325089312|gb|EGC42622.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88]
          Length = 442

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 119/351 (33%), Gaps = 26/351 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASM 161
           H L      DG                 +      +      A L     +  +V +   
Sbjct: 83  HELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQSGAGLAGAQSIHANVYATQP 142

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           VA   T    +   P++ + +Y              +  G+TE   G +   + ++  + 
Sbjct: 143 VAKFATEEQRQQMLPRLIAGDYR-------------VCFGVTEPNTGLETLKLRTEAIRD 189

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLCYQRL 275
            D         W  S+ ++   ++LA+       +     +     D      GL  +++
Sbjct: 190 GDSYRVSGQKIWISSAQVARRMVLLARTTPLEEVKKPSEGLSLFFIDFDKDAPGLELRKI 249

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           K K+G R+    E+ F N       L+G        V           A  ++    V+L
Sbjct: 250 K-KMGGRAVDANEVFFDNYRIPSDSLIGREGDGFKIVLHGMNAERCLLAGEALGLGYVAL 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAA 391
            +A  YA+ R V G  +     +   +AD  +++ AA   ++   N +D +K  +S    
Sbjct: 309 EKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNLEAAKLATYHATNLYDASKTDKSITQK 368

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +     KY   + A      A+   GG GY +E ++ R+ RE     I
Sbjct: 369 AVGVACNSAKYLAAEAAFTACERAVLTHGGMGYAQEYNVERYLRECFVPRI 419


>gi|296169524|ref|ZP_06851144.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895790|gb|EFG75485.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 393

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 121/385 (31%), Gaps = 34/385 (8%)

Query: 69  TAQELARMANYNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              E   +   +  +L            D+    P            G         +  
Sbjct: 9   ELTEDQELIRRSVAELAGKFDDQYWMEKDQAHEFPT--EFYDAIARGGWLGMTIPTEYGG 66

Query: 127 VVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                                + A   +  S+     V +  +  +     PK+ + E  
Sbjct: 67  HGLGITEATILLEEVAKSGGAMNAASSIHLSIFGMQPVVVHGSDELKARTLPKVATGEVH 126

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        +  G+TE   G D + IT+  ++  D         W   +  SD  +
Sbjct: 127 -------------VCFGVTEPGAGLDTSRITTFAKRDGDRYIVNGRKVWISKAMESDKIL 173

Query: 245 MLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL-- 298
           +L +     E       +   + D   + +  + +  K+G  + ++ EL   N    +  
Sbjct: 174 LLTRTQSYDEVTKKTDGMTLFITDLDRSRVDVRPI-RKMGRNAVSSNELFIDNLEVPVED 232

Query: 299 -LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G        + D      +  A  ++   RV+L +A+ Y   R V G  +     ++ 
Sbjct: 233 RIGQEGKGFQYILDGLNPERMLIAAEALGIGRVALDKAVKYGNEREVFGRPIGMNQGLQF 292

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD    + AA  +  +    +D  K    EA  A+ +       C     A    A++
Sbjct: 293 PLADSLARLDAAELMLRKATWLYDNGKPCGREANTAKYL-------CADAGFAAADRALQ 345

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG GY EE  I R++RE+    I
Sbjct: 346 THGGMGYAEEYHITRYFREARLMKI 370


>gi|115449575|ref|XP_001218642.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114187591|gb|EAU29291.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 434

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 22/333 (6%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +   A  V    +    + + P +                     LG+TE   G
Sbjct: 116 WALGCGNSIGAPPVINFGSEEQKRRFLPDMLQG-------------RTRFCLGVTEPDAG 162

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A I +  ++  D        KW +++ +   +   A   G  G   V  L+   +  
Sbjct: 163 SDVAGICTTAERRGDVYIVNGAKKW-ITNGIFADYCTAAVRTGGPGIQGVSALVIPLNAK 221

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  ++++N  G  ++ +  +EF         LLG  N     +        L  A  S+
Sbjct: 222 GVMRRKIENS-GVNASGSTYIEFDQVEVPVSNLLGQENKGFPIIMSNFNHERLWLACTSL 280

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV   +A  +A  R   G  LI+  V++   + +   + +  A   +L      A+ 
Sbjct: 281 RMARVCAEDAYRHAINRETFGKKLIENQVIRAKFSVMGRSLDSTYAWMEQLVYMAQMAQK 340

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSI 442
              +AA   + A + K    +    V  EA + +GG GY        I +  R+     +
Sbjct: 341 DGRDAAMGGLFANL-KVLAGRTLEMVNREAQQVMGGLGYSKNGRGARIEQVSRDVRVMVV 399

Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475
             GS   +    +N   K     E++   +  +
Sbjct: 400 GGGSEEILTDLSINQEIKAMKAMERMEKDMLAE 432


>gi|239625369|ref|ZP_04668400.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA]
 gi|239519599|gb|EEQ59465.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA]
          Length = 394

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 122/375 (32%), Gaps = 28/375 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
                 +I + L+       +      +   ++    +         HL      +  ++
Sbjct: 39  QEFYDLAIENDLYRCALPEEYGGYGLSELEILQVQEEFSRGPGGMRMHLHYAMDLNWRIL 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                  +  ++ PK              Q  SV     LTE  GGT  A + +   +  
Sbjct: 99  DDYGNDELKAEYMPKF-------------QDKSVFTCFALTEATGGTG-ADLHTTAVRDG 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFI-MLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           D  Y L+G K  +S      F  ++A           +          G     + + +G
Sbjct: 145 D-SYILNGEKTLISHTDCCEFAYVIAVTNPESDKADRLSAFFVPMDAPGFEVINMPHMMG 203

Query: 281 NRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R     +L+F++      +LLG              +     A  ++   +  L  ++ 
Sbjct: 204 CRGAGHGDLKFTDCRIDKKYLLGQEGQGLEIALHSLSVSRAHIAASNLGMAQRMLEMSLK 263

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA  R   G  ++ +  +K  +A++ ++I A   + +  A  ++       +  Y    A
Sbjct: 264 YAADRVTFGKPIVTRQAIKMKLANMQMNIHALRCMVYDFAKDYE----VQADGKYIEEKA 319

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDV 454
            + K +       V  E +E  GG GY E+     + R YR+  A  +  G+     + +
Sbjct: 320 AMCKLFSIDTVRLVSDEMLEIFGGVGYFEDNPYGPVERMYRDCRAMWLEEGAPTVQRITI 379

Query: 455 LNLLEKGTNLFEQLF 469
                K     E + 
Sbjct: 380 AKSAVKFGGQVEYVI 394


>gi|119715103|ref|YP_922068.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535764|gb|ABL80381.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 123/372 (33%), Gaps = 30/372 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            WDK   +P    +  +    G +               +  +  A        +     
Sbjct: 34  EWDKAGTYP--KEVFDQIADLGWYGIGIPDELGGSGGTASDLLVVAEELGRGSTDLVACF 91

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S + +    +    +     +  P I S                 + + +TE   G+D A
Sbjct: 92  SLTASGLRTIVTDGSDVQKAELIPAIMSG-------------RTRLSIAVTEPEAGSDAA 138

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM--LAQVEGRVGC-FLVPRLLEDGSPNG 269
           ++ +  ++  D  Y L+G K F  +      I+   A+ +        +  +L D +  G
Sbjct: 139 SLLTSARRDGDH-YVLNGQKTFCEAAGLPDTIVQLYARTDPAARKQDGISMILLDPTLPG 197

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +  +RL   +G       E+   +       L+G  N     +     L  L  +   V 
Sbjct: 198 VTLRRLPT-MGRNITGVYEVFLDDVRVPVDRLVGVENNGWRQLGAELPLERLIISAGFVG 256

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L + + + + R   G  + D   +   + D+   + +   L +R     D  +  
Sbjct: 257 ATLQVLEDTLQHVKEREQFGRAIGDFQAVAHLLVDLYTRVESVRLLVYRGGELHDAGQPH 316

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
           ++EA+ A+I          ++        M+  GG GY++E  +  HY ++   ++  G+
Sbjct: 317 TKEASMAKIA-------SAELYADAARYCMQLHGGYGYVDEHPLTMHYVDAVIATVAGGA 369

Query: 447 GNAMVLDVLNLL 458
                  V   L
Sbjct: 370 SQVQRNIVAREL 381


>gi|58260418|ref|XP_567619.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229700|gb|AAW46102.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 253

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 17/231 (7%)

Query: 235 LSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            ++  ++ F +LA  +        +   + D   +G+   + +  +G R++ T  + F +
Sbjct: 26  TNAGHANWFFVLAITDPEASPSRGMTGFIVDADTDGIILGKKEINMGQRASDTRMVTFED 85

Query: 294 TFGFLLGDLNVSTGPVEDMKILI-YLDSAI-----MSVSGMRVSLAEAIHYARRRHVSGG 347
                  + NV   P E  KI +   D         +V   + +L EA  YA+ RH  G 
Sbjct: 86  VIVP---EENVLGSPGEGFKIAMKAFDITRPLVSAAAVGLAQRALEEATKYAQERHTMGQ 142

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +I+   +   +AD+A+ + AA  L ++ A + D  +  +         A + K +  K 
Sbjct: 143 PIINHQGVAFMLADMAIGVEAARGLVWKAAWAKDCRQRNT-------FYASMAKAFAGKT 195

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A       ++  GG+G+  E  + + YR++    +   +     L V   L
Sbjct: 196 AVENANLGVQVFGGAGFNTEMPMEKLYRDAKIYELCEWTSQIQKLIVSKHL 246


>gi|114567634|ref|YP_754788.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338569|gb|ABI69417.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 381

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 128/380 (33%), Gaps = 27/380 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +  P  ++ D+    P    +L       L    +   +          + A       
Sbjct: 22  KSIAPVAKQIDEESKIPE--EVLAGMAELDLFGIPFPEEYGGADGGYDGYVLAMEQIAKV 79

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                  M+        ++   T    K +               P  K    +    TE
Sbjct: 80  SGGIAMTMAAHTLGLGAISAFGTEEQKKKYMI-------------PGCKAKHIVSFAFTE 126

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLE 263
              G+D   IT+   K  D  Y L+G K F+S+     A ++ A+    +    V   + 
Sbjct: 127 PGTGSDPKQITTTAVKQGD-FYILNGTKRFISNANYPGAMVVFAR---EMESGEVTAFIL 182

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    G        KIG      +++   +       LLG +      +     L  + +
Sbjct: 183 DKWAEGYSISEPWEKIGMHGGQLLDVYMKDVKVPADNLLGKIGQGFPILLLGIALGKIGT 242

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           +  ++ G   +L EA  YAR +   G  +     ++  IAD+A+    A  L +RL    
Sbjct: 243 STAALGGTLAALEEASKYAREKTHRGQPIAKFQAIQLKIADLAIKYETARWLCYRLGCLA 302

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ K   + AA     A + K +C          A++  G  G + + +I R YR++   
Sbjct: 303 NDIKDPGKFAA----EAALVKAYCGDNVVDAARIAVDVHGSYGLMRDYTIERVYRDAIIG 358

Query: 441 SILLGSGNAMVLDVLNLLEK 460
             + G  +   L V + + +
Sbjct: 359 PEIEGVADMQKLIVASSILR 378


>gi|167901186|ref|ZP_02488391.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|254181910|ref|ZP_04888507.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|184212448|gb|EDU09491.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
          Length = 623

 Score =  183 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|326475303|gb|EGD99312.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 432

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 126/362 (34%), Gaps = 30/362 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD     +V  + +++  +            L   +      +    T +   
Sbjct: 88  AGIAPGEWDVFHTLIVADELNRVGYSG-------PVWGLNGGNSIGCPPIMNFGTEQQKL 140

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++ P++   E                 L +TE   G+D++ I +  +K+          K
Sbjct: 141 EYLPRVARGEIR-------------FCLRVTEPDAGSDVSGIKTVAKKVGSHYIVNGAKK 187

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   +  L+   +  G+  +R+ N  G  ++ +  LEF 
Sbjct: 188 W-ITNGIWADYCTAAVRTGGPGHGGISFLIIPLATEGVTRRRMFNS-GVHASGSTFLEFD 245

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A   +   RV + +A  Y+  R   G  L
Sbjct: 246 DVEVPVENLIGRENEGFKYIMSNFNPERLSLASACIRLSRVCVEDAFRYSTVRETFGKPL 305

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           +   V++  I+ +   I    A   +LA +   ++    +      M  + K    +   
Sbjct: 306 LANQVIRAKISKMGQLIEPCQAFMDQLAYTIKTSEQAGRKVDI-GGMTALLKVMSTRCLE 364

Query: 410 AVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLF 465
            V  EA + +GG+GY    +   I    R+     +  GS   +  L V   L+    + 
Sbjct: 365 KVCREAQQIMGGAGYNKAGKGSRIEAISRDVRVYVVGGGSEEILRDLSVREELKHMRKVM 424

Query: 466 EQ 467
           E 
Sbjct: 425 EA 426


>gi|167463021|ref|ZP_02328110.1| possible acyl-CoA dehydrogenase (NADP(+)) [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383393|ref|ZP_08057176.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152297|gb|EFX45120.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 389

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 122/364 (33%), Gaps = 32/364 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR-KQAHKIRAARLYLMAQLE 147
           P     D+    P    L+ +    G   + W + +  +     A+ +   ++       
Sbjct: 26  PLAAEIDQSGVLP--RILISKMAQRGYLSASWPKEYGGLELDPVAYGLLTEQIGKACSNT 83

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              L   +      +    T    + W P              M + +      L+E   
Sbjct: 84  RALLTVQTSLLGETMLRFGTKEQKEMWLPL-------------MAQGAKMGAFALSEPNV 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D   + +  +K  +        KW   + ++D F++ A  E           + +   
Sbjct: 131 GSDAKNVQTSYRKEGNRYILNGRKKWISFAAIADFFLVAATNEAGQA----STFIVERER 186

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL    +K  +GNR     E++ +N           S G      +   LD    S++ 
Sbjct: 187 EGLHTIPIKGLLGNRGVHIAEIQLNNIEIPEENLFG-SEGGGFTYVVSTALDHGRYSIAW 245

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
              ++A       + Y+R R   G  L +  ++K  I D    + AA AL  R      E
Sbjct: 246 AGAAIAAEALEAMVTYSRTRSQFGEKLHNFQLVKGMIGDAVTKVHAARALCLRTGERRKE 305

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               S           I KY+  K+A  V ++ ++  GG+G        R +RE+    I
Sbjct: 306 GHDES------IHETAIAKYFASKIAVEVTSDTVQIHGGNGCYNAYPAERLFREAKVLEI 359

Query: 443 LLGS 446
           + G+
Sbjct: 360 IEGT 363


>gi|90075914|dbj|BAE87637.1| unnamed protein product [Macaca fascicularis]
          Length = 228

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 16/202 (7%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319
            + +    G+   R +  +G R + T  + F +         NV  G     KI +   D
Sbjct: 29  FIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVP---KENVLIGDGAGFKIAMGAFD 85

Query: 320 SAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                    +V     +L EA  YA  R   G +LI+   +   +A++A+ +  A     
Sbjct: 86  KTRPTVSSGAVGLAHRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQ 145

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D  +  +         A I K +   +A  +  +A++  GG+G+  E  + +  
Sbjct: 146 RAAWEVDSGRRNT-------YYASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLM 198

Query: 435 RESPANSILLGSGNAMVLDVLN 456
           R++    I  G+     L +  
Sbjct: 199 RDAKIYQIYEGTSQIQRLIIAR 220


>gi|55980758|ref|YP_144055.1| putative glutaryl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|145579313|pdb|2EBA|A Chain A, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579314|pdb|2EBA|C Chain C, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579315|pdb|2EBA|D Chain D, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579316|pdb|2EBA|E Chain E, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579317|pdb|2EBA|F Chain F, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579318|pdb|2EBA|G Chain G, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579319|pdb|2EBA|H Chain H, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|145579320|pdb|2EBA|I Chain I, Crystal Structure Of The Putative Glutaryl-Coa
           Dehydrogenase From Thermus Thermophilus
 gi|55772171|dbj|BAD70612.1| putative glutaryl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 385

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 123/378 (32%), Gaps = 31/378 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLEAGH 150
             W +    P    L+ R    G         +    V   A+ +    L  +       
Sbjct: 35  RDWWEEGVFPTH--LIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSF 92

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +   S      +    +    +++ PK+   E                  GLTE  GG+D
Sbjct: 93  VSVQSSLVMYPIYAYGSEEQKREFLPKLARGEM-------------VGCFGLTEPDGGSD 139

Query: 211 I-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
               + ++ ++  D         W  +  ++   ++ A+ EG      V   L      G
Sbjct: 140 PYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEGGE----VLGFLVPTDTPG 195

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              + +K K+  R++ T EL            L  + G    +  L       A  ++  
Sbjct: 196 FQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCLTQARFGIAWGAMGA 255

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           +     EA+ +A+ R   G  L  + +++  +A++         L++RLA   DE K   
Sbjct: 256 LEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTP 315

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            + + A+        W    A      A + +GGSG   E    RH           G+ 
Sbjct: 316 AQVSLAKRQ----NVW---KALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYEGTH 368

Query: 448 NAMVLDVLNLLEKGTNLF 465
           +   L +   +  G N F
Sbjct: 369 DVHTLVLGREIT-GLNAF 385


>gi|116750712|ref|YP_847399.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699776|gb|ABK18964.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 555

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 146/417 (35%), Gaps = 46/417 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVA 163
            +LRR    GL        +  +       +R     + M    A   ++        V 
Sbjct: 60  RMLRRMGEIGLFGVTIPEEYGGLGFNVWEYMRLVEAMVKMDVSVAIASIAHCSIGVKGVQ 119

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           L       + +               P     +     LTE R G+D   I +  +   D
Sbjct: 120 LFGNDAQKRKYL-------------VPAATGEMIFSYALTEPRIGSDAQHIETLAELSPD 166

Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           G  Y L+G K ++++   +    + A+++ R   FL    + +    G+   +   K+G 
Sbjct: 167 GSHYILNGQKTYITNANYAGGLTVFARMDPRRPGFL-GVFIVETGWEGVKVGKDMPKMGL 225

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335
           ++++T  + F+N    +    N+   P E  KI +       L     SV  M  SL + 
Sbjct: 226 KASSTAPVRFTNVRVPV---ENLLGKPGEGFKIAMTVLNYGRLGLGAASVGMMERSLRDM 282

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           +  +  R      + D P+++  +    ++ A + A++   A+  + A   +       I
Sbjct: 283 MKRSSTRVQFQVPIRDFPLIQEKLVRARVNAAVSKAMNDFAAHFLNAAPRLNVA-----I 337

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +    A   + +A++  GGSGY+  +   +  R+    ++  G+     +   
Sbjct: 338 ETSHCKLFGTTRAWDTLYDALQVAGGSGYLSTQPYEKRMRDFRVATVFEGTTEIHSIYPA 397

Query: 456 NLLEKGTN---------------LFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497
             L + T                  + L + ++ +LG   + +    R + +  +  
Sbjct: 398 LFLIRKTAKDALRGGRRTAALTFCLKALAARIDWELGFDNRIMRRAWRLAGANARTI 454


>gi|331011699|gb|EGH91755.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 333

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 115/314 (36%), Gaps = 33/314 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKTY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    +  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHASEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYKITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA+++        +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLQDAPPGPKGISLFLVPKFMVGDDGSLGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F +  G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDDATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQS 314

Query: 335 AIHYARRRHVSGGI 348
           A+ YA+ R  S   
Sbjct: 315 AVEYAQDRLQSRAP 328


>gi|89053755|ref|YP_509206.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1]
 gi|88863304|gb|ABD54181.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1]
          Length = 398

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 93/290 (32%), Gaps = 21/290 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           +  +      AP+        + +TE   G+    + +   K  D         W     
Sbjct: 93  YGTDEQKAFCAPIVLAGDKPAICITEPEAGSAATQMRTTACKRGDTYILNGSKHWITGGG 152

Query: 239 MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           +S   ++ AQV         +G F+V        P G      ++ +G       EL+F 
Sbjct: 153 VSKLHLVFAQVLNEAGQPQGIGGFIVYAD-PKAPPAGFRVLGREHTMGLCGMPEAELKFD 211

Query: 293 NTFGFL------LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           N              L      +        + +  +++     +L  A  Y   R   G
Sbjct: 212 NLEVDAKWLLTPPSGLRRGFADLMTAYNSQRVGAGTIALGVAAGALDHAKRYMTERQQFG 271

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +   ++  +AD+   + AA  +    A          E A      A   K +  +
Sbjct: 272 RPIAEFQGLQWMVADMDTQVHAARLMLHDAARC--------EGAFPDMTKAARAKLFASE 323

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           M   V+ +A++  G  GY +   + R YR+    +I  G+   +   +  
Sbjct: 324 MGIKVVNDALQMFGARGYSDREPLERMYRDVRMFTIGGGTAQILRTQIAG 373


>gi|33599646|ref|NP_887206.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567242|emb|CAE31156.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 396

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 117/375 (31%), Gaps = 33/375 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E  D+ + +P    +++     G       R +        H               
Sbjct: 37  PEAEAIDRQDVYPV--QIIKAMARRGYTSLTLPRQWGGGAAPYGHCAAVFEEASYGSAAV 94

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +   + + +++       +     P+                  +     LTE   G
Sbjct: 95  GISLITILQAQTLINQFGAESLKAAVLPEFAQG--------------LITAYALTEANHG 140

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DI ++ ++ ++ + G        +  S   ++A+I+LA+ +       V          
Sbjct: 141 SDIRSLDTKARRGAGGWTLEGRKSFITSGSAAEAYIVLAETD-----HGVSTFFVRRDMP 195

Query: 269 GLCY--QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
           G+           G R+   V+L           L+G                   +  +
Sbjct: 196 GVSTFDGPTSGTFGLRNGPHVDLILDGVVVPDDHLIGVEGKGVRQAVTTLDFSRTMAGAI 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +   A+ YA  R      ++    ++   AD+A  I AA  L +    + DE 
Sbjct: 256 SLGIARAAFDNALAYAAGREAFDQKVLGFQGIQWYFADLATRIDAARLLVYEACVALDEH 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  +         A   K    ++A     +A++  G  G  E     R+ R++ A  I 
Sbjct: 316 REIAR-------YASEAKLAASQVATRAAEQAIQICGAYGVTERAPFGRYLRDAKAYEIA 368

Query: 444 LGSGNAMVLDVLNLL 458
            GS   +   +   L
Sbjct: 369 GGSSEILKNTIGKQL 383


>gi|332671133|ref|YP_004454141.1| glutaryl-CoA dehydrogenase [Cellulomonas fimi ATCC 484]
 gi|332340171|gb|AEE46754.1| Glutaryl-CoA dehydrogenase [Cellulomonas fimi ATCC 484]
          Length = 398

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 140/424 (33%), Gaps = 38/424 (8%)

Query: 38  SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV 97
           ++D+ + A +A       + L  + E+  S   ++         P    Y      WD+ 
Sbjct: 3   TTDTPVHAPLAADFYGFQEALTPV-EHDASARLRDFME--REVRPLALDY------WDRA 53

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           EF    H ++      G+  ++W  +             A  L  +    A  +   S  
Sbjct: 54  EFP---HQIIPGLADCGMFGAMWPETMRFENSAVWRGWAALELGRVDPSTATFVGVQSGL 110

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITS 216
           S S +A+  +P     W P             PM +  +    GLTE   G+D +  + +
Sbjct: 111 SMSSIAIGGSPEQRAQWLP-------------PMGRGELIGAFGLTEPLSGSDASKGLRT 157

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             ++  D        +W  ++  +D  ++ A+             L      G    +++
Sbjct: 158 TAERRGDTWVLNGAKRWIGNATFADVVVIWARDTADGQVKG---FLVRRGTPGFTTTKIE 214

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE 334
            K   R     ++            L       E   +L     + A  +V     +   
Sbjct: 215 RKQALRIVQNADITLDGVEVDEADRLPNIHSFREVAVVLRLTRAEVAWQAVGVAVGAYEA 274

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y   R   G  L    +++  +A    +I A+ AL  + +   D  +   E AA A+
Sbjct: 275 TVRYVAEREQFGRPLASFQLVQDRLAQCLGNITASIALCLQASRMQDAGRLGDEHAALAK 334

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
                   +        +A   E +GG+G   +  +A+ + ++ A     G+ +   L V
Sbjct: 335 G-------YATTRMRETVAWCRELLGGNGIQLDHGVAKFFADAEAVYSFEGTRDMNNLIV 387

Query: 455 LNLL 458
              +
Sbjct: 388 GRAI 391


>gi|159035759|ref|YP_001535012.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157914594|gb|ABV96021.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 617

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 92/507 (18%), Positives = 176/507 (34%), Gaps = 106/507 (20%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL-----LRRSIHDGLHC 117
           + +           ++ N P                F PA H        ++S    +  
Sbjct: 46  DRLAREDLAASYTDSDRNPPV---------------FDPATHTAPLPEPFKKSYQRFMDS 90

Query: 118 SIW----DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
             W      +       +A     A L L A        S     A ++ +  T R  K 
Sbjct: 91  EFWRLDLPEALGGSNAPRALWWSLAELVLGANAPVWMYASGPSF-AHVLHVEGTERQRK- 148

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
           WA     R +  T             + LTE   G+D+ A  ++     DG + + G K 
Sbjct: 149 WAKLFIDRGWGST-------------MVLTEADAGSDVGAGRARAIPQPDGSWHIEGVKR 195

Query: 234 FLSSPMSD-----AFIMLAQV----------EGRVGCFLVPRLLED------GSPNGLCY 272
           F++S   D        +LA+              +  F+VP+   D      G  NG+  
Sbjct: 196 FITSGEHDLGDNIVHYVLARPVGVEGVGGPGTKGLSLFVVPKYHFDEDTGELGERNGVFA 255

Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             +++K+G + + T EL F        G+LLGD +     +  +     +     +++ +
Sbjct: 256 TNVEHKMGLKVSNTCELTFGEHGVPAQGWLLGDKHDGIRQMFMIIEYARMMVGTKAIATL 315

Query: 329 RVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAATALSFRL 376
                 A+ YA+ R                  +   P ++R++           AL    
Sbjct: 316 STGYLNALEYAKNRVQGADLTQMTDKSAPRVAITRHPDVRRSLLLQKSYAEGLRALVCYT 375

Query: 377 ANSFDE-AKSRSEEAAYARIMA--------PITKYWCCKMAPAVIA-EAMECIGGSGYIE 426
           A   D+ A + +     A  +A        P+ K    + A  ++  E+++  GGSG+++
Sbjct: 376 ATWQDKVAIATAAGDEKAVKLAKRVNDLLLPLVKGVGSERAYELLGHESLQTFGGSGFLQ 435

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           +  + ++ R++  +++  G+     LD++             F  + +D G +   V   
Sbjct: 436 DYPLEQYVRDAKIDTLYEGTTAIQSLDLI-------------FRKVVRDNGKALLAVAGE 482

Query: 487 LRDSIS-------LCKEDKGLARFLTE 506
           +++ IS       L +E + L R L E
Sbjct: 483 IQEFISTEGGNGQLKEERQALGRALAE 509


>gi|301348227|ref|ZP_07228968.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301513569|ref|ZP_07238806.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596701|ref|ZP_07241709.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
          Length = 194

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 12/201 (5%)

Query: 232 KWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           ++  ++P +  F ++A+    + G   +   L + +  G+   ++  K+G + + T ++ 
Sbjct: 1   RFITNAPHAATFTVMARTNPEIKGSGGISAFLVEANTPGITLGKIDQKMGQKGSHTCDVI 60

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F N        +      G    MK+L    L     SV      L +A+HYA  R   G
Sbjct: 61  FENCRVPASALIGGVEGVGFKTAMKVLDKGRLHIGAYSVGVAERMLNDALHYAIERKQFG 120

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K +  +
Sbjct: 121 QPIANFQLIQAMLADSKAEIYAAKCMVLDAARRRDNGENISTE-------ASCAKMFATE 173

Query: 407 MAPAVIAEAMECIGGSGYIEE 427
           M   V    ++  GG+GYI E
Sbjct: 174 MCGRVADRCVQIHGGAGYISE 194


>gi|163792236|ref|ZP_02186213.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
 gi|159181941|gb|EDP66450.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
          Length = 411

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 132/381 (34%), Gaps = 33/381 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +P     ++     G       +++    R            + AQ   
Sbjct: 26  PRAAEVDRTESYP--WDNVQALTDAGFMGMTVPKAYGGPGRSYMDVTLVIE-EMAAQCGV 82

Query: 149 GH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               ++  ++ + S V    T    K  A  + S +                 + +TE  
Sbjct: 83  TGRVVVEGNMGAISAVMQYGTEPQKKRAAEFVLSGD--------------KPAICITEPD 128

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLED 264
            G+    +T++  K  +         W     +S   ++ A+V    G    +   L   
Sbjct: 129 AGSAATEMTTRADKRGNTYVLNGKKHWITGGGVSRLHLIFARVFDESGAEQGIGGFLAFR 188

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMKILIYL 318
           G  +GL     +  +G R     E+ F      ++        L      + +      +
Sbjct: 189 GEDDGLVIGAREPTMGLRGIPETEVLFQDLALPADRLVMPPSGLKRGFADLMNAYNAQRV 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +  +++     +   A+ +++ R   G  + +   ++  +AD+++ + AA AL +R A+
Sbjct: 249 GAGTVALGLAEGAYRRALAFSKEREQFGRPIAEFQGLQWMLADMSVQLEAARALIWRAAS 308

Query: 379 SF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +         +  A     A  +K +  +MA  V ++A++  G  GY     + R  R++
Sbjct: 309 TAGQNGNPFPDSLA-----AAQSKIFASEMAIKVASDALQVHGARGYSRNWPMERILRDA 363

Query: 438 PANSILLGSGNAMVLDVLNLL 458
              +I  G+   +   V + L
Sbjct: 364 RMFTIGGGTAQILRTVVASRL 384


>gi|307292550|ref|ZP_07572396.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880616|gb|EFN11832.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 384

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 122/357 (34%), Gaps = 31/357 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLMSPSVTSASMV 162
             + R     GL           +       + A           A  + + +  +    
Sbjct: 39  WEVARMMAEQGLIGVTVPEDKGGLGGSLMDAVIAIETIASVCPRSADVVQAGNFGAIRTF 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A   T    + +              AP+ +    I + +TE   G+ +  +T+   +  
Sbjct: 99  AQFATDAQKEQYL-------------APLLRGEGLISVAMTEPNAGSAVTELTTTAVEDG 145

Query: 223 DGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-G 280
           DG Y ++G K F +       F++  +     G      +L +    G  + +    + G
Sbjct: 146 DG-YRITGQKIFTTHGTHATVFLVYVRFGPGTGNIGS--VLIERGQEGFSFGKPIRFLSG 202

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHY 338
              N    L F N +      L    G  + M    +  + +   S++  R +   A+ +
Sbjct: 203 EEWNP---LFFDNVYVPKDKVLLGPGGFKKQMSGFNVERIGNTARSLALGRYAFNAAVEH 259

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  L +   ++   A++ L + AA  L +R A + D      +E         
Sbjct: 260 AKTRRQFGKALCEFQGLQWKFAEMKLKLDAAQLLLYRAATNADAGLPSPDE-------TA 312

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           I K  C +       EA++ +GG+GY ++  +    R +    I  G+   ++  + 
Sbjct: 313 IAKVACNRAGFDCANEAIQIMGGAGYSQDSLVEYCLRRTRGWMIAGGAIEVLLNRIA 369


>gi|296534096|ref|ZP_06896603.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
 gi|296265592|gb|EFH11710.1| acyl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957]
          Length = 388

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 112/339 (33%), Gaps = 21/339 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            H  L    W     P     A    A    +M  +          ++  M      P V
Sbjct: 41  FHQALARDGWLGICMPEPLGGAGLGIAEAAIMMRAIAESGAGMTGASAVHMNIFGLNPVV 100

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                    S E       P+   +      +TE   G D   + ++ ++  D       
Sbjct: 101 V------FGSTEQQARMLPPLIAGTERACFAVTEPNTGLDTTKLQTRAERRGDHYVVHGQ 154

Query: 231 HKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             W  ++ +++  ++LA+             +           +  + +  K+G ++  +
Sbjct: 155 KVWISTAQVAERVLLLARTTPLEQVTRRTEGLSLFYTALDRTKVRVREIP-KMGRKAVDS 213

Query: 287 VELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+ F      +   +GD       +        +  A  +V    V+L  A  YA+ R 
Sbjct: 214 NEVFFDGLEVPVEDRIGDEGKGFDYILHGLNPERILVAAEAVGLGAVALRRATEYAKDRR 273

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  +     ++  +A+  + + AA  +  + A  +D+  S   EA  A+ +A    + 
Sbjct: 274 VFGRAIGQNQAIQHPLAESWMALEAAWLMVMQAAWRYDQGMSCGAEANAAKYLAAEAGFE 333

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            C+ A       +   GG GY  E  + R+ RE     I
Sbjct: 334 ACQRA-------VMTHGGFGYAREYHVERYLREVMIPRI 365


>gi|126440337|ref|YP_001057574.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 668]
 gi|134279449|ref|ZP_01766161.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|126219830|gb|ABN83336.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|134248649|gb|EBA48731.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 623

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 165/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E     +       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPPTFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|86751210|ref|YP_487706.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574238|gb|ABD08795.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 415

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 145/436 (33%), Gaps = 41/436 (9%)

Query: 43  LVALIANFPSVVHKELELLGEYVLSCTAQE----LARMANYNTPQLHAYGPGGERWDKVE 98
           L    A +            ++ LS   QE     A   +     L      G   D   
Sbjct: 2   LRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLE--DQWGID-DYAV 58

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
            H  +  ++RR    G       +                    +  +    +    V S
Sbjct: 59  PHDVFMDVVRRFREYGFRGLAVPKDAGGQG--------------LGTMAKCLVYEEIVKS 104

Query: 159 ASMVALMTTPRVHKDWAPKIF-SREYDPTNKA-PMQKTSVAIGLGLTEKRGGTDIAAITS 216
             M  L+TT     D  P ++ + E+       P+ K      + ++E   G+D A I +
Sbjct: 105 PVMHGLLTTWSGFLDPHPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAAGIET 164

Query: 217 QGQKISDGIYCLSGHKWFL---SSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
              +  D  Y ++G K +    + P       +  A  +   G   +   L D    G+ 
Sbjct: 165 TAVRDGD-TYVINGIKRWAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVS 223

Query: 272 YQRLKNKI--GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV---S 326
             R    +  G     + + ++ +        L         M   +  +  ++      
Sbjct: 224 VLREYTTMAPGTYLGRSCDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTG 283

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +  +A+  AR R   G  L ++  ++  +A+  +D+  +  + ++ A   D+    
Sbjct: 284 TARWAQTQAVKRARARETFGKPLSERQAIQWMLAESEMDLEQSRLMVYKTAWMLDQGLDA 343

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +EAA  +  AP+        A  VI  A++  GG G ++E    + Y +S    +  G+
Sbjct: 344 RKEAAMVKCFAPLA-------ACRVIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGT 396

Query: 447 GNAMVLDVLNLLEKGT 462
              M + +   + + +
Sbjct: 397 TEVMKMTIAREVLRAS 412


>gi|257070123|ref|YP_003156378.1| acyl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
 gi|256560941|gb|ACU86788.1| acyl-CoA dehydrogenase [Brachybacterium faecium DSM 4810]
          Length = 461

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 135/407 (33%), Gaps = 37/407 (9%)

Query: 60  LLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116
            L + V     Q  A    +A+   P+++ +      WD+ E+      L+ R     L 
Sbjct: 77  ALFQDVAGEDLQAWADARSLADEVLPRINDW------WDRGEYP---IELIARLGELDLL 127

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
               D      +   A  +    L  +       +      +   + L+ +    + WA 
Sbjct: 128 TDGLDVPGHRTLSPLATGLVNMELSRIDGSVGTMVGVQGGLALRSIMLLGSEEQKQRWAE 187

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                        P+ + +      LTE   G+D  ++ +  ++  DG       +W  +
Sbjct: 188 -------------PLARGTEHAAFALTEPDHGSDSVSLETVARRDGDGWVLSGQKRWIGN 234

Query: 237 SPMSDAFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
                  ++ A+VE          V   L D S  G   + ++ K+  R+     +    
Sbjct: 235 GAGCHLSVVWARVEDESQPALHGQVSGFLVDQSLPGYDAEVIRGKVALRAIHQAHITLDG 294

Query: 294 TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               L   L  +    +   +L       A  ++         A+ +A++R   G  L  
Sbjct: 295 VRIPLAQRLPGARSFKDTSVVLFATRAGVAWGALGHALACYEAALEHAQKRIQFGRPLAK 354

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  +AD+   + +      RLA        R E+A+ A       K    + A  +
Sbjct: 355 AQHVQVRLADMLQTLTSMQLHCRRLAELEAAGTIRPEQASLA-------KVHNTRAAREI 407

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + A + +GGSG + E  + RH  +  A     G+     L V   +
Sbjct: 408 ASNARDLLGGSGILLENRVVRHRSDIEALHTYEGTDTMQSLIVGRSI 454


>gi|145592655|ref|YP_001156952.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145301992|gb|ABP52574.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
          Length = 617

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 88/543 (16%), Positives = 187/543 (34%), Gaps = 79/543 (14%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D         +  +           V   T ++LA     ++ N P    + P   
Sbjct: 18  VFGADRAFSQAP--YTELDVDTARSFLAEVDRLTREDLAASYTDSDRNPPV---FDPATH 72

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
                    ++    RR +           +       +A     A L L +        
Sbjct: 73  ---TAPLPESFKKSYRRFMDAEFWRLDLPEALGGSNAPRALWWSLAELVLGSNAPVWMYA 129

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           S     A ++ +  T R  K WA     + +  T             + LTE   G+D+ 
Sbjct: 130 SGPSF-AHVLHVEGTERQRK-WAKLFIDQGWGST-------------MVLTEADAGSDVG 174

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----------EGRVGCFL 257
           A  ++     DG + + G K F++S   D        +LA+              +  F+
Sbjct: 175 AGRARAIPQPDGSWHIEGVKRFITSGEHDLSDNIVHYVLARPVGVEGVGGPGTKGLSLFV 234

Query: 258 VPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307
           VP+        E G  NG+    +++K+G + + T EL F        G+LLG+ +    
Sbjct: 235 VPKYHFNEETGELGERNGVFATNVEHKMGLKVSNTCELTFGEHGVPAQGWLLGEKHDGIR 294

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVM 355
            +  +     +     +++ +      A+ YA+ R                  +   P +
Sbjct: 295 QMFMIIEYARMMVGTKAIATLSTGYLNALEYAKSRVQGADLTQMTDKSAPRVTITHHPDV 354

Query: 356 KRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARI----MAPITKYWCCK 406
           +R++           AL    A   D     EA    +    A+     + P+ K    +
Sbjct: 355 RRSLLLQKSYAEGLRALVCYTAGWQDKVAIAEAAGDEKAVELAKRVNDLLLPLVKGVGSE 414

Query: 407 MAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463
            A  ++  E+++  GGSG++++  + ++ R++  +++  G+     LD++   ++     
Sbjct: 415 RAYELLGHESLQTFGGSGFLQDYPLEQYVRDAKIDTLYEGTTAIQSLDLIFRKVVRDNGK 474

Query: 464 LFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEKIALASSA--AALYR 519
               +   +++ + + G   ++    +       E + +   LT  +  A      ALY+
Sbjct: 475 ALMAVAGEIQEFISAEGGNGQLKDERQALGRALGEIQSILGVLTGWLGEAQGGETRALYK 534

Query: 520 AGM 522
            G+
Sbjct: 535 VGL 537


>gi|226364009|ref|YP_002781791.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242498|dbj|BAH52846.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 378

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 29/358 (8%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           +L +    G         +                      E   L   +   A ++A  
Sbjct: 43  ILDKFAGLGWLAVSLPEEYGGGGAGMVE-------------ECIFLEESARGLAPIIAYS 89

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
           T     + +    +  E                 + L+E   G+D+  +  + + + D  
Sbjct: 90  TGLTAAQTYLR--YGTEEQKRTIVGNMAAGKLEAIALSEPGAGSDLGGVRIKAELVDDH- 146

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y ++G K ++S+  +++  ++LA+ +        +   +      GL    +K      +
Sbjct: 147 YVINGQKTWISAAHIAEHILLLARTDTSGNKHQGLTLFMVPTDTPGLQIHEIKT---MEA 203

Query: 284 NATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
               +L F++    +   +G  N +   +     +  L  A M++ G + SL + I +  
Sbjct: 204 RTCNDLYFTDVAVPVSAVVGTPNQAWRHLMRGLSVERLIIATMALGGAQRSLDDLIAFVT 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     ++  IAD+A +IA A +  + +A   D  +  +           + 
Sbjct: 264 EREQFGHKISSFQAIRHRIADLATEIAFAKSFVYEVAERIDAGEEDN-----LNREGSMA 318

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K  C ++A     EAM+ +GG GY  E  +    R S A  I  G+       +   L
Sbjct: 319 KLKCTEIAKKTALEAMQMMGGYGYTREYGMEEQVRRSLAPPIYGGTNEIQREIISKSL 376


>gi|212533105|ref|XP_002146709.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072073|gb|EEA26162.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 454

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 77/368 (20%), Positives = 124/368 (33%), Gaps = 37/368 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQ 145
              D+ E  P           DG                    I  A L +       A 
Sbjct: 84  RECDQEERDP--KEFHAALAKDGWLGIALPEELGGSGL----GISEATLMMQTISQSGAG 137

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V +   +A   T    +   P I +  +                 G+TE 
Sbjct: 138 MAGAQSIHANVYATQPLAKFGTKEQVQKLIPNIINGTWR-------------TCFGVTEP 184

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCFLVPR 260
             G D   + +   K SD  Y +SG K W   S ++   I+LA+     E +     +  
Sbjct: 185 NTGLDTLKLKTTATKNSDNTYLVSGQKVWITCSQVASVMILLARTMSLEETQRPTEGLSM 244

Query: 261 LLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D    GL  +R+K K+G R+    E+ F N       L+G  N     +      
Sbjct: 245 FAINLDRKNPGLELKRIK-KMGGRAVDANEVFFDNYEIPADTLVGKANDGFKIILHGMNA 303

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++     +L +A  YA+ R V G  +     +   +AD  + + AA   ++ 
Sbjct: 304 ERCLLAGEALGLGYAALEKASLYAKERQVFGRPIGKNQAIAHPLADAYMRLEAAKLATYH 363

Query: 376 LANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A  +D +K+ S  ++ A   A    KY   + A      A+   GG GY  E  + R  
Sbjct: 364 AARMYDASKTDSSISSQAVGTACNSAKYLAAEAAYTACERAVMTHGGMGYAVEYDVERWL 423

Query: 435 RESPANSI 442
           RE     I
Sbjct: 424 RECFVPRI 431


>gi|120405164|ref|YP_954993.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957982|gb|ABM14987.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 399

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 119/364 (32%), Gaps = 42/364 (11%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-----LMAQLEAG 149
           D+    P          + G         +                       M    A 
Sbjct: 39  DQAHEFP--QEFYDAIANGGWLGMTIPEEYGGHGLGITEATLLLEEVSRSGAAMNGASAI 96

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           HL   S+     V    +  +     P+I + +               +  G+TE   G 
Sbjct: 97  HL---SIFGMQPVVKHGSDELKAATLPRIVNGDLH-------------VCFGVTEPGAGL 140

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--------GRVGCFLVPRL 261
           D + IT+  ++  D         W   +  S+  ++L + E        G      +   
Sbjct: 141 DTSRITTFAKREGDKYRVNGRKVWISKALESEKILLLTRTESPDDLEKRGAKKTDGMTLF 200

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
           L D   N +  + +  K+G  + ++ E+   +    +   +G+       + D      +
Sbjct: 201 LTDLDRNHVDIRPI-RKMGRNAVSSNEVFIDDLMVPVEHRVGEEGKGFKYILDGLNPERM 259

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   RV+L +A+ Y   RHV    +     ++  +AD    + AA  +  +   
Sbjct: 260 LIAAEALGIGRVALEKAVKYGNERHVFNRPIGMNQGLQFPLADSLARLDAAELVLRKATW 319

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  K    EA  A+ +       C          A++  GG GY EE  ++R++RES 
Sbjct: 320 LYDNGKPCGREANTAKYL-------CADAGFGAADRALQLHGGMGYSEEYHVSRYFRESR 372

Query: 439 ANSI 442
              I
Sbjct: 373 LMKI 376


>gi|283834089|ref|ZP_06353830.1| acyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
 gi|291070235|gb|EFE08344.1| acyl-CoA dehydrogenase [Citrobacter youngae ATCC 29220]
          Length = 388

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 117/375 (31%), Gaps = 34/375 (9%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSV 156
            F  +++ + R+   + L        F  +             +         +L   + 
Sbjct: 36  VFPDSYYDVCRK---NDLFRLAMPEEFGGMGLNCEQFFSVMEEFCRGPGGMRMNLHHANG 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++       +   W P +                   I   LTE   G+  A I +
Sbjct: 93  LNWRIMYDHGAEDLRAKWLPLL-------------ANKDAYINFALTEADCGSG-ADIRT 138

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQR 274
              K  D  Y L+G K  +S   +SD   ++A  +        +     + +  G     
Sbjct: 139 TAVKKGD-KYILNGTKTLISHTDISDGSYVIAVTDENKRKKGGLTAFFIETNTPGYYIDP 197

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV---SGMRVS 331
           + + +G R      L F N        +      ++     +    A+++V      +  
Sbjct: 198 MPHMMGCRGAGHAYLRFENCEVPAHNIMGKEGDGLDIFMNALAHSRAMIAVTCLGMSQRF 257

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  AI  A+ R   G  L  +  +++ +AD+   + A   +    A  FD  +       
Sbjct: 258 LELAIARAKDRVTFGKALASRQAIQQTLADMGTQVHALRVMLRDCAQKFDRGED------ 311

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGN 448
              +++ + K         V    +E  GG GY E+     + R YR++ A     G   
Sbjct: 312 -IEMVSAMCKLHGIDTVRTVSDSCLEIFGGIGYFEDNPYGPVERMYRDARALWFEEGPRT 370

Query: 449 AMVLDVLNLLEKGTN 463
              L +   L     
Sbjct: 371 VQRLTIARPLIAAGG 385


>gi|255600684|ref|XP_002537510.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223516083|gb|EEF24874.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 218

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 78/216 (36%), Gaps = 12/216 (5%)

Query: 248 QVEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--V 304
           +     G      ++ +     G    R  +K+G+ +  T EL F++        L    
Sbjct: 10  RPTRPGGARGTSLVVVETDGAEGFERGRNLDKLGHEAQDTSELFFNDVKIPTENLLGTEE 69

Query: 305 STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
             G  + M  L    L+ A+  ++ +  +L   I Y + R   G  +I     +  +A+ 
Sbjct: 70  GQGFFQLMAQLPQERLNIAVQGMATIERALELTIAYVKERQAFGKPIIAFQNTQFVLAEC 129

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +   A                R  +       A + KYW   +   ++   ++  GG 
Sbjct: 130 KTEATVAKVFVNHC-------IERHLKGDLDASTASMAKYWVTDLENKIVDRCLQLFGGY 182

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G++ E  IAR Y++S    I  G+   M L +   L
Sbjct: 183 GFMNEYPIARMYKDSRVQRIYGGTNEIMKLLIARTL 218


>gi|320094445|ref|ZP_08026224.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319978619|gb|EFW10183.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 377

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 122/376 (32%), Gaps = 32/376 (8%)

Query: 85  HAYGPGGERWDKVEFHP-AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
             +       D+   +P  W   +      G    +    ++ +          A    +
Sbjct: 23  RNWDAYFHECDEKHEYPIEWTEAI---CELGFDRILLPEEYDGLGAD--WVTLTAAYEAL 77

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            +      +   +     V    T    +     + + +               +   +T
Sbjct: 78  GREGGPTYVLYQLPCWDTVLREGTEEQKEKILSFVGTGKQM-------------LNYAMT 124

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+    + +   +  DG   L+GHK F++S +   ++++   +             
Sbjct: 125 EPSAGSSWDDMRTTYTRK-DGKVYLNGHKTFITSSLYAPYLVVMARDSENMDTYTEWF-V 182

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D S  G+  + L  K+G R ++  ++ F N       L G              L     
Sbjct: 183 DMSLPGITKEPL-GKLGLRMDSCCDVYFDNVELEEKDLFGKEGNGFRRGVADFDLERFLV 241

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A+ +      +  +A  YA +R   G  +    + +   A++ + +     + + +A   
Sbjct: 242 ALTNYGTAYCAFEDAAKYANQRIQGGQAIARHQLTQLKFAEMKVRLTNMRNMLYEIAWKH 301

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D           +R    + KY+C + +  V+  A++ + G G   +  I R YR+   +
Sbjct: 302 DNGL-------LSRGDCSMAKYYCSEASFGVVDRALQVLAGVGITGDHRIQRFYRDLRVD 354

Query: 441 SILLGSGNAMVLDVLN 456
            I  G+   M+L    
Sbjct: 355 RISGGTDEMMILATGR 370


>gi|269140008|ref|YP_003296709.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda EIB202]
 gi|267985669|gb|ACY85498.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda EIB202]
 gi|304559840|gb|ADM42504.1| Crotonobetainyl-CoA dehydrogenase [Edwardsiella tarda FL6-60]
          Length = 380

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E      A            +TE   G+D+ ++ +   + +  +Y      +  SS  + 
Sbjct: 104 EQIDRIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTYTRKNGKVYLNGSKCFITSSAYTP 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+        +      D S  G+   +L+ K+G R ++  E+ F N       L
Sbjct: 164 YLVVMARDGASPEKAVYSEWFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G        V++         A+ +      +  +A  YA +R   G  +    +++  
Sbjct: 223 FGREGNGFNRVKEEFDHERFLVALTNYGTALCAFEDAARYANQRVQFGETIGRFQLIQEK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A +A+ + +   +    A   D     S +AA         KY+C   A  V+  AM+ 
Sbjct: 283 FAHMAIKLNSMKNMLLESAWKSDNGLMTSGDAAM-------CKYFCANAAFEVVDTAMQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G   +  I R +R+   + +  GS    +L +   + K
Sbjct: 336 LGGVGIAGDHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|53718122|ref|YP_107108.1| hypothetical protein BPSL0483 [Burkholderia pseudomallei K96243]
 gi|126454302|ref|YP_001064822.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           pseudomallei 1106a]
 gi|167717959|ref|ZP_02401195.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
 gi|167736981|ref|ZP_02409755.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           14]
 gi|167814084|ref|ZP_02445764.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           91]
 gi|167844183|ref|ZP_02469691.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|167892690|ref|ZP_02480092.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           7894]
 gi|167909404|ref|ZP_02496495.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167917435|ref|ZP_02504526.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|242316696|ref|ZP_04815712.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254196292|ref|ZP_04902716.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254259014|ref|ZP_04950068.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|52208536|emb|CAH34472.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|126227944|gb|ABN91484.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|169653035|gb|EDS85728.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|242139935|gb|EES26337.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254217703|gb|EET07087.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 623

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|257792823|ref|YP_003183429.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317489216|ref|ZP_07947733.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325832272|ref|ZP_08165271.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|257476720|gb|ACV57040.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316911617|gb|EFV33209.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325486108|gb|EGC88562.1| putative crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 385

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 125/367 (34%), Gaps = 33/367 (8%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
            AW A+       G                      A               S  + +  
Sbjct: 42  DAWKAM----AEAGFTGLGLPEEVGGTDVDLMTVALANFTISRYGGPLAAFYSMGMPTMY 97

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            V    TP   + +               P       + LG++E   G+D+A + +    
Sbjct: 98  DVCEFGTPEQIEKYVK-------------PYIAGGAPLALGISEPSTGSDVAGMQTSYAW 144

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNK 278
             D      G K + +  M    I++   +  V          L D    G+   +L  K
Sbjct: 145 DGDTAVINGG-KHYTTCGMEAPAIIVIAKDPTVDNVHRGATMFLVDRDTPGVTINKLP-K 202

Query: 279 IGNRSNAT--VELEFSNTFGFLLGDLNVS-TGPVEDMKILIYLDSAIMS--VSGMRVSLA 333
           +G+ +  T   E+  ++        L V   G ++ M        A +S  ++    +  
Sbjct: 203 MGHENAPTSICEVFLNDVRVPRSAILGVEHNGFMQTMANFTRERIANVSGVIATAVNAFE 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           +A  YA +R   G  +    +++  I +++  I     + ++L    D+ +         
Sbjct: 263 DACAYANQREQFGQQIGRFELVQEMIMEMSCKIENMMNMLYKLCWQADQGQD-------V 315

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           RI+A + KY+C K    V+ +A++ + G G + +  + R+Y +  +  I  GS   MV +
Sbjct: 316 RILAGMAKYYCSKATCEVVDDAIQVLAGIGVVGDHRVGRYYIDIRSARIAGGSDQVMVFN 375

Query: 454 VLNLLEK 460
               + K
Sbjct: 376 TAPQILK 382


>gi|289613150|emb|CBI59744.1| unnamed protein product [Sordaria macrospora]
          Length = 588

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 101/580 (17%), Positives = 184/580 (31%), Gaps = 104/580 (17%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78
           +++ F   QP   I  N +  DS     + +  +        LG  VL+         + 
Sbjct: 6   ANTGFIQQQP---IIKNQFHEDSTSPPSLLSSSTPSLS---SLGSAVLAPEIFHWITDSE 59

Query: 79  YNTPQLHA--YGPGGER--WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
            NTP L        G      ++     W  L       G+    +D +F       +  
Sbjct: 60  RNTPYLRGSGRDAFGRPSSKQELIVSEGWRKLQEFGFEQGVVAINYDPTFSAQNGPYSRL 119

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALM---TTPRVHKDWAP--KIFSREYDPTNKA 189
           ++  R +L     A  L   ++   +   L    TTP +    +   K           +
Sbjct: 120 VQFLRCHLWEASCANTLCPAAMQDGAARLLQRHLTTPELVGRLSEEEKRVFGNAYDHLTS 179

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-------D------------------G 224
             +  +   G  +TE+ GG+D++   +             D                  G
Sbjct: 180 RDKAYAWTSGQWMTERTGGSDVSQTETVAVYDPFPSSAGPDAKEEVPLALASKEESIPLG 239

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL---------------EDGSP-- 267
            + +SG KWF S+  S   I+LA+    +G   V   +               E G    
Sbjct: 240 PWSISGFKWFSSATDSQMTILLAKTRPGMG---VSAFMAPMRRYNPELVSVTGEKGGEEL 296

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
           NG+   RLKNK G     T ELE     G+++G        +  +  +  + + + S+  
Sbjct: 297 NGITISRLKNKFGTVGLPTAELELKGMRGWMIGKEGEGIKEISTILNITRVHTTVSSMGY 356

Query: 328 MRVSLAEAIHYARRRHV---SGG--ILIDQPVMKRAIADIALDIAAATALSFRL------ 376
           +   +  A  YA  R      G    L   P+  R +A +  +      L+F        
Sbjct: 357 LGRGIGVAKAYALVREAGVGKGRRLPLYKHPLHMRTLAGLTSEYHGLMLLTFYTLYILGL 416

Query: 377 ----------------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
                                 +            ++  R ++ + K + C  +  +   
Sbjct: 417 DEHPSSSSSPSQISSPSSASPPSPLHPLTPPPQLVSSLLRTLSSLHKSFICHTSVPLSFG 476

Query: 415 AMECIGGSGY-----IEERSIARHYRESPANSILLGSGNAMVLDVLNLL------EKGTN 463
            ME +GG GY      E  +++R +R++   +I  G+ + +  D +  L      ++G  
Sbjct: 477 CMESLGGVGYLVNSESEHLNLSRIFRDACVGAIWEGTTDVLASDTVRALKHPMIGKEGVE 536

Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
             E    T     G   +  +  +R      K      R 
Sbjct: 537 ALEWFVGTGLGLAGGGKRGEVERVRKVWEGLKRKLERGRQ 576


>gi|302529942|ref|ZP_07282284.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
 gi|302438837|gb|EFL10653.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4]
          Length = 403

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 21/283 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             +   + +TE   G+D AAIT+   +  D  Y L+G K F++S   +DA ++ A ++  
Sbjct: 127 KGLWAAMAITEPGCGSDSAAITTTATQDGDD-YILNGEKIFVTSGQRADAVVVWATLDRT 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
            G   +   + +    G    R+++K+G R++ T  L F N        L    + T   
Sbjct: 186 KGRAAIKSFVVEKGTPGFEVVRVEHKLGIRASDTAVLRFENCRVPRENLLGTPEIDTAKG 245

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---DQP-VMKRAIA----D 361
               ++   D+    V+ M + +A A     RR ++   ++   D+P + + A A     
Sbjct: 246 FAG-VMQTFDNTRPLVAAMAIGVARAALDETRRILTEAGIVIDYDRPSLTQHAAAATFLQ 304

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  AA  L+   A   D  +  S +A+ A+  A  T          V  + +E  G 
Sbjct: 305 LEADYEAAYLLTLESAWMADNRQPNSLQASMAKAKAGRTV-------VDVTLKCVELAGA 357

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GY EE  + +  R++    I  G+     L V   +   T+ 
Sbjct: 358 YGYTEESLLEKWSRDAKILDIFEGTQQIQQLIVARRVLGKTSA 400


>gi|326475805|gb|EGD99814.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326479172|gb|EGE03182.1| long-chain specific acyl-CoA dehydrogenase [Trichophyton equinum
           CBS 127.97]
          Length = 441

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 83/455 (18%), Positives = 151/455 (33%), Gaps = 46/455 (10%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
              N P        +S    L  L + + +  H++ +          L   A E  R   
Sbjct: 1   MGTNSPNPV----PFSEPPYLCGLPSPYYTEAHRQFQKACRAFIWEHLHSHAMEWEREGT 56

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIR 136
                   +         +        L + +IHD  G+    WD ++            
Sbjct: 57  VPPHVFEVFAKHNMLLPNLPSPLPVAWLKKLNIHDILGVRVEDWDLTYTG---------- 106

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQK 193
              +YL      G    PS  +A                P +    SRE        M  
Sbjct: 107 ---IYLDEMSRCGLSGPPSSLTAG----------FAFGIPPMLAFGSRELQEKFLPDMLT 153

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V   + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G 
Sbjct: 154 AKVRSCIAITEPDAGSDVANITTTAEKSADGKYYIINGEKKWITNGIWSDYTTMAVRTGG 213

Query: 253 VGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
            G   +  ++       G+  +RL    G     T  +E  N       L+G        
Sbjct: 214 PGPTGLSMIVVPLKGYPGVTMRRLLVS-GQVCGGTTYIELDNVKVPVENLIGQEGHGMRY 272

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+      RV+L+ A  Y  +R   G  L+DQPV++  ++    ++ +
Sbjct: 273 IMTNFNHERLTIAVGVTRQARVALSAAFEYCMKREAFGKTLMDQPVVRHRLSKAGAELES 332

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-- 426
             A   +          +SE       +  + K     +       A+   GG G+ +  
Sbjct: 333 MWAWVEQFIYQMSN-MPKSEGDRRLGGLTALAKAKAGMVLNECAQVAVLLFGGLGFTKSG 391

Query: 427 -ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + +  R+ P   I  GS + ++   +  L K
Sbjct: 392 QGELVEKILRDVPGARIPGGSEDVLLDLAVRQLVK 426


>gi|238920833|ref|YP_002934348.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella ictaluri 93-146]
 gi|238870402|gb|ACR70113.1| crotonobetainyl-CoA dehydrogenase [Edwardsiella ictaluri 93-146]
          Length = 380

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           E      A            +TE   G+D+ ++ +   + +  +Y      +  SS  + 
Sbjct: 104 EQIDRIMAFRGTGKQMWNSAITEPGAGSDVGSLQTTYTRKNGKVYLNGSKCFITSSAYTP 163

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---L 298
             +++A+        +      D S  G+   +L+ K+G R ++  E+ F N       L
Sbjct: 164 YLVVMARDGASPEKAVYSEWFVDMSLPGIKVNKLE-KLGLRMDSCCEVVFDNVELEEKDL 222

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            G        V++         A+ +      +  +A  YA +R   G  +    +++  
Sbjct: 223 FGREGNGFNRVKEEFDHERFLVALTNYGTALCAFEDAARYANQRVQFGETIGRFQLIQEK 282

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
            A +A+ + +   +    A   D     S +AA         KY+C   A  V+  AM+ 
Sbjct: 283 FAHMAIKLNSMKNMLLESAWKSDNGLMTSGDAAM-------CKYFCANAAFEVVDTAMQV 335

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +GG G   +  I R +R+   + +  GS    +L +   + K
Sbjct: 336 LGGVGIAGDHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLK 377


>gi|218510845|ref|ZP_03508723.1| Acyl-CoA dehydrogenase [Rhizobium etli Brasil 5]
          Length = 395

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 126/333 (37%), Gaps = 45/333 (13%)

Query: 211 IAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDA-----FIMLAQV----------EG 251
           +A + ++ +          Y L G+K ++S    D       ++LA+V            
Sbjct: 1   MADVRTRAEPDGQDDLGARYRLVGNKMWISGGDQDVSENIVHLVLAKVAAGNEALPVGTE 60

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGP 308
            +  F+VP+ L DG+ N +    L +K+G R  A   L         G+++G        
Sbjct: 61  GLSLFIVPKYLPDGTRNDIAIAGLNHKMGYRGTANCLLNLGETTGAIGWIVGQPGQGLRQ 120

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAI 359
           +  M     +   + + +        ++ YA  R               +I+   +KR +
Sbjct: 121 MFQMMNEARISVGLGAAAVGYRGYRLSVGYANERLQGRPAGVRNGPQVPIIEHSDVKRML 180

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                 +  A AL    A   D+ +  ++ A    ++ PITK W  +        A++  
Sbjct: 181 LTQKAYVEGALALCLYSARLVDD-EDNADSANLLGLLTPITKTWPSEYGLLANDIAIQVH 239

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV--LDVLNLLEKGTN---LFEQLFSTLEQ 474
           GG GY  +  + + +R++  N+I  G+       L    +L  GT    L +++ +T+++
Sbjct: 240 GGYGYTRDFDVEQLWRDNRLNTIHEGTTGIQAGDLLGRKILRDGTGMKVLEDRMSATVDR 299

Query: 475 D--------LGSSGKKVITILRDSISLCKEDKG 499
                    LG++       +RD+ +     + 
Sbjct: 300 AAAIEQLSGLGAALGTAWARVRDTAAKLGAGEA 332


>gi|147678768|ref|YP_001212983.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
 gi|146274865|dbj|BAF60614.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI]
          Length = 366

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 127/358 (35%), Gaps = 30/358 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA-SMV 162
           +A+++R          +   +          I A          A  + +     A + +
Sbjct: 30  YAVVKRLADIDFLGIFFPEIYGGAGSDFTSFIIAVEELAKVSASAAVVYANHCCLAENAI 89

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +  + +++  K+   E                G   +E    TD   I +  ++  
Sbjct: 90  YQWGSDELKEEYLSKLCRGE-------------KIGGFAFSEGSLNTDWLLINTTAERQG 136

Query: 223 DGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y L+G K ++ ++     FI++A+     G       + +G   G+       K+G 
Sbjct: 137 -GYYILNGKKTYVVNAQPQSLFIVVAKT----GEKEYSSFVVEGDAGGVTVGPAHAKMGL 191

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                 ++   N       L+G           +  L  +  A ++V   + +L ++I Y
Sbjct: 192 EGVCVTDITLENVKVPAANLIGTPGQGLAIAAGVLGLQNVALAAIAVGISQTALEKSISY 251

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  +I    ++  +  +A    AA  L+++ A+  D+ +   +    AR +A 
Sbjct: 252 AKERVQFGRPIIKFEALQVMVGKMAAYTEAARLLTYKAASLRDQGEDFVQAGEMARYIAQ 311

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 C        +A++  GG GY ++  I   YR+    S+   S   ++L +  
Sbjct: 312 TAGEQTC-------IDAVQIHGGYGYSKDLGIDALYRDMKGISLFDTSEKPIILQIAR 362


>gi|294953057|ref|XP_002787573.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Perkinsus marinus ATCC 50983]
 gi|239902597|gb|EER19369.1| Short/branched chain specific acyl-CoA dehydrogenase, putative
           [Perkinsus marinus ATCC 50983]
          Length = 621

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 20/267 (7%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPK---IFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           L++    SA   A+     +H    P+   ++  +       P           L+E   
Sbjct: 292 LITIEEISAVDPAVGALVDIHNTLIPRSIHLYGNDDQKDMWLPRLAQDTVGAFALSEAGA 351

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG-- 265
           G+D  A+++   K+  G        W  +S  +  F++ A V+  +G   +   L     
Sbjct: 352 GSDAFALSTTATKVPGGWAINGDKMWISNSKEAGLFLLFATVDRSLGHKGITAFLMPKYE 411

Query: 266 ---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-DSA 321
                 G    + + K+G ++++T  L F N F   L D  +     E  K+ + L +  
Sbjct: 412 GDLVREGFTIGKPEKKLGIKASSTCPLNFDNVF---LPDSALLGRVGEGYKVAMSLLNEG 468

Query: 322 IMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + ++   + +A+A       Y   R   G  L+D   M+  +A++  ++ AA  L +  
Sbjct: 469 RIGIAAQMLGIAKAAIKHSMRYMSERKQFGKTLLDFQGMRFQLAELQAEVYAAQLLVYNA 528

Query: 377 ANSF---DEAKSRSEEAAYARIMAPIT 400
           A      D+ +  S++       A +T
Sbjct: 529 AALKIMVDQGELSSKDIILECSAAKLT 555


>gi|48478096|ref|YP_023802.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
 gi|48430744|gb|AAT43609.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790]
          Length = 357

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 119/286 (41%), Gaps = 15/286 (5%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
           +F  +      + +      +GLG+TE  GG+D+A + +   K  +  Y ++G K F+++
Sbjct: 84  LFGNDAQKKILSDVMLGRKILGLGVTEPTGGSDVAGLKTTAVKSGN-KYIINGSKIFITN 142

Query: 238 P-MSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             ++D  ++LA+          +   L D    G    +L  K+G R+  T EL+F++  
Sbjct: 143 GSIADYILVLARTSNESKRHLGLSVFLVDTKSKGFSASKLHGKLGVRATDTAELKFNDLE 202

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
                   V    +    I+I+ D + + V+   + +AE    +  ++V    + D+   
Sbjct: 203 VDESML--VGEEGMGFYYIMIFFDISRVYVAAQALGIAEGALDSMMKYVKENNIRDE-NT 259

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              IA +   + AA  L++    +   + ++ E+ + A+  A     +  + A  +    
Sbjct: 260 MFDIARVYTRVQAARLLTYNATMNLVNSVTKPEDTSAAKAYAGEAAVYAAEKALEIT--- 316

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
               G SGY     I   +R +    I  G+ +   L +   L KG
Sbjct: 317 ----GLSGYRYNLDI--MFRNAKIMEIWEGTTDVENLIIARTLLKG 356


>gi|331223443|ref|XP_003324394.1| acyl CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303384|gb|EFP79975.1| acyl CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 439

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 139/384 (36%), Gaps = 44/384 (11%)

Query: 104 HALLRRSIHDGL----------------HC-SIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           HA  +++  DGL                H   I D   E      A  ++   +   +  
Sbjct: 62  HATYQQAAKDGLILPNIGGIRIPKEWTKHAKIIADIPPEEWDGFHAFILQDELMRCGSAG 121

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
             G L S     A ++    +  + +   P +                S    + +TE  
Sbjct: 122 AVGGLFSGMAYGAPLIWKYGSTELREKLMPGLL-------------NGSKRTCITITEPS 168

Query: 207 GGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
            G+D+  +++  +K  DG         KW  +    D F    +  G+ G    +  ++ 
Sbjct: 169 AGSDVKNLSTTAEKSPDGKHWIINGTKKWITNGIWCDYFTTAVRTRGKPGDPSGISVIVI 228

Query: 264 DGSPNGLCYQRLKNKIG-NRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
              P+ +   R+  K+G    + T ++ F N      +L+G  N     +        L+
Sbjct: 229 PKGPD-VKVSRM--KMGGVWCSGTSQVVFDNVKVPIDYLVGKENEGFKYIMSNFNHERLN 285

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  +    RV + +A+ +A +R V G  L++  +++  +  +   + +  A    L   
Sbjct: 286 IAFSAHRSARVCIEDAMAHATKRKVFGEPLMELSIIRHKLGQMVRLVESQHAWIESLVYQ 345

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRE 436
            ++  S +E  A     + + K  C      V  EA++ +GG GY    +   I R +RE
Sbjct: 346 LNQ-LSDAEGTALLGGQSALLKAHCGITLEFVAREAVQILGGLGYTRGGAGERIERAWRE 404

Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460
             + SI  GS   M+   +    K
Sbjct: 405 IKSVSIPGGSEEVMLDLAVRQQLK 428


>gi|254296040|ref|ZP_04963497.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|157805947|gb|EDO83117.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
          Length = 618

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 73  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 133 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 179 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 238

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 239 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 298

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 299 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 357

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 358 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 417

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 418 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 477

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 478 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 537

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 538 MFGLVACAWALLEAA--CIAERRLATR 562


>gi|289581789|ref|YP_003480255.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289531342|gb|ADD05693.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 388

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 123/383 (32%), Gaps = 41/383 (10%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPA-WHALLRRSIHDGLHCSIWDRSFEPVVR 129
           Q  A +A    P+        E+ +  EF  A W  L       G H  +    +E    
Sbjct: 14  QTAADVAAEYGPEH-----WREKEEAGEFSEAFWDEL----AEAGFHGLLIPEEYEGAGM 64

Query: 130 KQAHKIRAARLYLM---AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                  A               +L+  +  +A  +    T    + + P I        
Sbjct: 65  GMQEMGLAMETLCAEGCGMAGTWYLVLTAGMAAVGIREYGTESQKETYLPDI-------- 116

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        +G+TE   GT+   + ++ +K  D         W   S  ++  I++
Sbjct: 117 -----ANGKRNFSIGITEPEAGTNTLNVATKAEKDGDEYVLNGQKAWITFSDRAENMIIV 171

Query: 247 AQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
            +   R     G   +   + D   + +    + +K G   + + E+   N       +L
Sbjct: 172 TRTTPREEVDRGTDGISLFIVDMDDSNIDVSPI-DKHGINYSKSCEVFLENVRVPEENML 230

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD       + DM     +  A       +++   AI YA  R V    +     +   I
Sbjct: 231 GDEGDGWWVLVDMLNPERIGFAAAGTGIGKLAANTAIEYANEREVFDAPIGSHQGVSFPI 290

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A     +  AT +  + A  +D+ +  + E   A+  A              + ++M+  
Sbjct: 291 AKPYAKMETATLMREKAAWLYDQGEDCAYETNVAKATAVSA-------GIEAVKQSMQAF 343

Query: 420 GGSGYIEERSIARHYRESPANSI 442
           GG GY  E  + R +RE     +
Sbjct: 344 GGWGYATEYDVERWWREINLTRL 366


>gi|217419925|ref|ZP_03451431.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|254187842|ref|ZP_04894354.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157935522|gb|EDO91192.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217397229|gb|EEC37245.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 623

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 86/507 (16%), Positives = 165/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A  L  A    IA+  L  R
Sbjct: 543 MFGLVACAWTLLEAA--CIAERRLATR 567


>gi|297183322|gb|ADI19458.1| acyl-CoA dehydrogenases [uncultured Sphingomonadales bacterium
           HF0500_24B12]
          Length = 553

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 129/369 (34%), Gaps = 36/369 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            ++      G+           +   +      +       + AG L + S  ++ ++  
Sbjct: 195 EVIEGMAELGVFGVCIPEEHGGLGLGKLAMCLVSEELSRGWICAGSLGTRSEIASELILT 254

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISD 223
             T    + + P++      PT                TE   G+D+A++ ++ ++  + 
Sbjct: 255 NGTQEQKRKFLPRLADGSILPTAV-------------FTEPDAGSDLASVRTRAKRSDAG 301

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPN---------GLCYQ 273
           G        W   +  +D   +L + +  R G   +  LL + +           G+  +
Sbjct: 302 GWRIHGSKTWITHAARADLMTILVRTDPDRPGHGGLSMLLAEKTRGTQGEPFPDAGIDGE 361

Query: 274 RLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +   +G R      L F        G L  +       +        + +A  ++    
Sbjct: 362 EIA-VLGYRGMREYTLGFEGFAVAQEGLLGAEEGKGFKQLMHTFEGARIQTAARAIGVAW 420

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L   + YA +R   G  L+  P +   +A +A +I  A  L++  A   D  K    E
Sbjct: 421 NALDLGLAYAVQRSQFGQPLLGFPRVSDKLAVMAAEIVMARELTYDAARRKDRGKRCDIE 480

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A+++A        + A +    A++  GG+GY  E  I+R   ++   +I  G+G  
Sbjct: 481 AGMAKLLAA-------RTAWSAADNALQIHGGNGYALEYEISRVLCDARILNIFEGAGEI 533

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 534 QAHVIGRGL 542


>gi|134100103|ref|YP_001105764.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291002903|ref|ZP_06560876.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133912726|emb|CAM02839.1| acyl-CoA dehydrogenase, middle domain [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 402

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 105/276 (38%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +  +   D  Y L+G K F++S   +DA ++ A ++  
Sbjct: 126 AGKWAAMAITEPDCGSDSAAIRTTARLDGDE-YVLNGQKIFVTSGERADAVVVWATLDRS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   + +    G    RL++K+G R++ T E    +        L       E  
Sbjct: 185 KGRGAIKSFVVEKGTPGFELVRLEHKLGIRASDTAEFRLDDVRVPKENLLGSPEINTEQG 244

Query: 313 K--ILIYLDSAIMSVSGMRVSLAE-AIHYARRR--HVSGGILIDQPVMKR-----AIADI 362
              ++   D+    V+ M V +A  A+   R +          D+P  ++        ++
Sbjct: 245 FAGVMQTFDNTRPLVAAMAVGVARAALDETREKLTEAGLAPDYDRPPHRQSSAAATFLEL 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A   L+ + A   D  +  S +A+ A+  A        +    V    +E  G  
Sbjct: 305 EADWEAGYLLTLQAAWMADNGRPNSLQASMAKAKAG-------RTGTDVTLRCVELCGTL 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R++    I  G+     L +   L
Sbjct: 358 GYSENSLLEKWSRDAKILDIFEGTQQIQQLVIARRL 393


>gi|256827304|ref|YP_003151263.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
 gi|256583447|gb|ACU94581.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641]
          Length = 384

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            +       G         F  +       I      L  +    H++  +  S   +  
Sbjct: 41  EIAEAYRDAGFGLMGIPEEFGGIP-ADRQTIGLMIERLYEKSGCMHILYQNSLSMFDIME 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    +     +    Y  T             L ++E   G+D  ++T   +K +DG
Sbjct: 100 FGTDEQKQ-----MCMDHYMETGWPI-------SSLSISEPGAGSDNRSMTCVTKKQADG 147

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y LSG K +++   +    I++A+ E        +   L      G+    L +KIG +
Sbjct: 148 TYLLSGQKTWVTMGAVLPYTIVVAKDEDPSHDNGDMSLWLVKMDTPGVSTAAL-HKIGQQ 206

Query: 283 SNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYA 339
                E+ F +        +     G +  MK             +   + +L++A  YA
Sbjct: 207 CIPFCEVYFDDVVLTEDMRMGEAGKGFMMLMKNFEVERAYIVAEQLGLAQAALSDAAQYA 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  +  Q +++  + D+ + +       +++    D  +    E+A  +     
Sbjct: 267 NQRIAFGKPIFKQEMIQELLTDMEIKVQTTRQFLYKVLWMMDNGEPVQLESALLKR---- 322

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
              + CK    V   A++   G GY  E  I R + ++  N    G+   M       + 
Sbjct: 323 ---YGCKECFEVTDMALQIYAGLGYTTEVRIGRLWADTRGNMFGGGTHEIMAYIGGRQVA 379

Query: 460 KGTNL 464
           K   L
Sbjct: 380 KKYAL 384


>gi|295700916|ref|YP_003608809.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440129|gb|ADG19298.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 390

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 132/387 (34%), Gaps = 44/387 (11%)

Query: 68  CTAQELAR-MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              ++  R + ++     H +       D+   +P     +      G   ++  + +  
Sbjct: 13  QEIRDAVRALCDHFPADYHRH------IDEKRGYPE--EFVDALTKAGWLAALIPQDYGG 64

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A +       +             +   + +    T +  + + P+I + E    
Sbjct: 65  PGLSMA-EASVIMEEINRSGGNSGACHGQMYVMNTIVFSGTEQQKQRYLPRIAAGELR-- 121

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                        +G+TE   G+D   + +   K  DG + ++G K ++S    SD  I+
Sbjct: 122 ----------VQSMGVTEPTTGSDTTKLKTTAVKK-DGRWVVNGQKVWISRVQHSDLLIL 170

Query: 246 LAQVEG----RVGCFLVPRLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TF 295
           LA+       R     +   + +      NGL  + + N + N    T EL F N     
Sbjct: 171 LARTTPIDQVRKKSDGLSCFIVELDKTIGNGLTVRPILN-MVNH--ETNELFFDNLELPE 227

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             LLG        + D         A   +      L +A  YA  R+V G  +     +
Sbjct: 228 DALLGTEGKGLKVIFDGLNAERTLIAAECIGDGYWFLEKARDYASERNVFGRPIGQNQGI 287

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A+  +++ AA  + +R     D  ++   EA  A+ +A    +             
Sbjct: 288 QFPLAESFIELEAANLMRWRACQKIDARQNAGVEANMAKYLAAKASW-------EAANAC 340

Query: 416 MECIGGSGYIEERSIARHYRESPANSI 442
           ++  GG G+  E  + R +RE+    +
Sbjct: 341 LQTHGGFGFACEYDVERKFRETRLYQV 367


>gi|156741868|ref|YP_001431997.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233196|gb|ABU57979.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 364

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 133/359 (37%), Gaps = 38/359 (10%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-----------IRAARLYLMAQLEA 148
             A+ A  +R+I   +    WD    P    + +              AA       L  
Sbjct: 27  PAAYEADEKRTIPQDIIARGWDLGLLPSAIPEQYGGFGETHQALTGALAAEELGYGDLSM 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              +      A  +    T    + W P++    + P                L E R  
Sbjct: 87  ALYLMTPNLFAIPILHYGTEEQKEKWLPRLVEGGFAP------------YTAALIEPRWS 134

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            D  A+ +  ++    +Y ++GHK  +  +  + AF++ A+       F++ R       
Sbjct: 135 FDPHALHTVAEREG-HVYEITGHKALVPLAADAHAFLVYAREGETTQAFIIER-----GT 188

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP-VEDMKILIYLDSAIMSVS 326
            GL     ++ +G R+  T EL   +        +    G  ++ +     +  A ++V 
Sbjct: 189 EGLAVLERESFMGIRALPTYELRLDDVHVPASCRVGGDQGIDIDHLMNYSRVALAALAVG 248

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +   A  YA++R   G  +     +   +A++A+++ AA  +++  A   D+ +  
Sbjct: 249 VARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEVEAARLMTYEAAWHLDKGRHA 308

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            ++AA A       K +  +MA  V   A++ +GG GYI E  + R  R     S  LG
Sbjct: 309 VQQAALA-------KAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFLG 360


>gi|118617699|ref|YP_906031.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium ulcerans Agy99]
 gi|118569809|gb|ABL04560.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium ulcerans Agy99]
          Length = 412

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 114/316 (36%), Gaps = 36/316 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 115 AATIMSRGTLAQKQRWLPELMTLE-------------KIAAWAITEPDSGSDAFGGMKTH 161

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ------VEGRVGCFLVPRLLEDGSPNGL 270
            ++     Y L+G K F+++   +D  ++ A+               V   + +    GL
Sbjct: 162 VKRDGAD-YILNGQKTFITNGPYADVLLVYAKLDEAGATSSDRRDRPVLIFVLESGMAGL 220

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVSG 327
              +   K+G  S+ T EL F N        L  S    +   +     + A   + V+ 
Sbjct: 221 TQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGESEHHGDGDGRESARANFAVERLGVAL 280

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M + +        + YA+ R + G  +    +++  +A + +       + F+       
Sbjct: 281 MALGIINECHRLCVDYAKTRTLWGKNIGQFQLIQLKLAKMEVARINVENMVFQTLEKLKA 340

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 341 GREPTLAEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 394

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 395 YAGSNEVQVTHIAKGL 410


>gi|156063668|ref|XP_001597756.1| hypothetical protein SS1G_01952 [Sclerotinia sclerotiorum 1980]
 gi|154697286|gb|EDN97024.1| hypothetical protein SS1G_01952 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 427

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 114/349 (32%), Gaps = 32/349 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H L       G                    I  A + L    E+G      V +   VA
Sbjct: 78  HELHADLAKGGWIGIALPEELGGSGL----GISEATMMLHTISESGA----DVYATQPVA 129

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              TP   +   PK+    +                 G+TE   G +   + ++  +  D
Sbjct: 130 KFATPSQRQSMLPKLIDGTWR-------------ACFGVTEPNTGLETLKLKTRAMREGD 176

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN--GLCYQRLKN 277
                    W  S+ ++   ++LA+             +     D  P   GL  +++K 
Sbjct: 177 TYRITGQKIWISSAQVATNMVLLARTTPIEEVAKPSEGLSLFFIDFDPKQLGLELKKIK- 235

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G  +    E+ F N       L+G        V           A  ++     +L  
Sbjct: 236 KMGGSAIDANEVFFDNYVVRSNSLIGKEGQGFKIVLHGMNAERCLLAGEALGLGYAALYR 295

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYA 393
           A  YA+ R V G  +     ++  +AD  + + AA   ++  A  +D++++  +      
Sbjct: 296 ASRYAKERIVFGRPIGMNQGIQHPLADAYMHLEAAKLATYHAARLYDKSRTDETVTQTAV 355

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     KY   + A      ++  +GG GY  E  + R+ RE     I
Sbjct: 356 GVACNSAKYLAGEAAFTACERSVLSLGGMGYAREYHVERYLRECFVPRI 404


>gi|167647538|ref|YP_001685201.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167349968|gb|ABZ72703.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 387

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 129/365 (35%), Gaps = 36/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQ 145
                R D+    P   A +      G        S         +A  +  A     A 
Sbjct: 26  DEYWRRTDETGIFPE--AFVAAIAEGGWLGVAMPESVGGAGLGLTEAAVMMQAVAQSGAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +  ++     +    T    +   P++ S E               +   +TE 
Sbjct: 84  FSGASAIHLNIFGPMPIVKFGTDEQRQKHLPRLISGEDK-------------MCFAVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC----FLVPR 260
             G D +++ ++ ++ +DG Y L+G K + +    ++  +++A+   +  C      +  
Sbjct: 131 NSGLDTSSLETRAERTNDG-YVLNGRKIWTTGAQRANKILIIARTTPKDQCAKPTQGLSL 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
              D         +   K+G ++     L   + F     L+G+       +        
Sbjct: 190 FYTDREK---IEAKPIPKMGRKAVECNMLFIEDLFVPADDLVGEEGKGFSYLLHGLNPER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A+ ++   R +LA+A  YA+ R V G  +     +   +A    ++ AA  L+F+ A
Sbjct: 247 VLFAVEAIGLGRAALAKATTYAKERVVFGRPIGQNQGVAHPLARSWAELEAANLLAFKAA 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D  +    EA  A+ +     +  C+        ++   GG GY +E  + R++RE+
Sbjct: 307 ALYDRGQDCGAEANAAKYLGAEAGFTACES-------SVLAHGGMGYAKEYDVERYFREA 359

Query: 438 PANSI 442
               I
Sbjct: 360 MIARI 364


>gi|183981932|ref|YP_001850223.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium marinum M]
 gi|183175258|gb|ACC40368.1| acyl-CoA dehydrogenase FadE21 [Mycobacterium marinum M]
          Length = 412

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 114/316 (36%), Gaps = 36/316 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 115 AATIMSRGTLAQKQRWLPELMTLE-------------KIAAWAITEPDSGSDAFGGMKTH 161

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ------VEGRVGCFLVPRLLEDGSPNGL 270
            ++     Y L+G K F+++   +D  ++ A+               V   + +    GL
Sbjct: 162 VKRDGAD-YILNGQKTFITNGPYADVLLVYAKLDEAGATSSDRRDRPVLIFVLESGMAGL 220

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIYLDSA--IMSVSG 327
              +   K+G  S+ T EL F N        L  S    +   +     + A   + V+ 
Sbjct: 221 TQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLGESEHHGDGDGRESARANFAVERLGVAL 280

Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           M + +        + YA+ R + G  +    +++  +A + +       + F+       
Sbjct: 281 MALGIINECHRLCVDYAKTRTLWGKNIGQFQLIQLKLAKMEVARINVENMVFQTLEKLKA 340

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 341 GREPTLAEASAIKL------YSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 394

Query: 443 LLGSGNAMVLDVLNLL 458
             GS    V  +   L
Sbjct: 395 YAGSNEVQVTHIAKGL 410


>gi|163789384|ref|ZP_02183823.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
 gi|159875238|gb|EDP69303.1| putative acyl-CoA dehydrogenase [Carnobacterium sp. AT7]
          Length = 401

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/415 (19%), Positives = 138/415 (33%), Gaps = 46/415 (11%)

Query: 56  KELELLGEYVLSCTAQELAR---MANYN-TPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +++    E +     + L R     N +  P ++ Y      W + EF        +   
Sbjct: 14  EDILKFSEKLTDGEIEVLQRVRKAVNEHLKPVINDY------WKRGEFP---TEEFKHVA 64

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS---MVALMTTP 168
             GL         +P      +       Y + + +A       V +        L  +P
Sbjct: 65  KTGLISDPVLFENQPNRFTWGNTYFLFLAYDLYKFDASIATFFGVHAGLGYFSFLLGGSP 124

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYC 227
                W PK+             Q   +     LTE   G+D AA + +  ++  D    
Sbjct: 125 EQQMRWLPKL-------------QNFELQTCFALTEPEHGSDTAAGLATTARREGDKWII 171

Query: 228 LSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
               +W   +  +D   + A+   + +V CF+V     +    GL    + +KI  R   
Sbjct: 172 NGEKRWIGGASSADLIPVYARDLEDNKVKCFIV-----EKGQKGLSVDDIDDKIALRIVQ 226

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRH 343
              +   N        L    G  +  KIL       A      M  SLA A+ Y   R 
Sbjct: 227 NGNIHLDNVEVLESNRLQNINGFKDVAKILYATRAGVAYAGAGMMAGSLAAALEYTTTRV 286

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  +    +++  +A +  +   A ALS R+A   +  +       Y+ I A + K  
Sbjct: 287 QFGKPIASFQLVQEKLARMQGNAVTALALSARIAELQERGE-------YSEINASLAKMN 339

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                    A   E  GG+G   ER++AR + ++ A     G+     L +   L
Sbjct: 340 NSLRLRETAALGREVCGGNGITLERNVARFFCDAEAIYSYEGTHEMNSLIMGRKL 394


>gi|148553250|ref|YP_001260832.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148498440|gb|ABQ66694.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1]
          Length = 384

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 120/357 (33%), Gaps = 31/357 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLMSPSVTSASMV 162
             + R     GL           +       + A           A  + + +  +    
Sbjct: 39  WEVARMMAEQGLIGITIPEEKGGLGGSLMDAVIAIETIASVCPRSADVVQAGNFGAIRTF 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A   +    + +              AP+ K    I + +TE   G+ +  +T+      
Sbjct: 99  AQFASDAQKEQYL-------------APLLKGDGLISVAMTEPNAGSAVTELTTTAVPDG 145

Query: 223 DGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-G 280
           DG   +SG K F +       F++  +     G      +L +    G  + +    + G
Sbjct: 146 DGF-RISGQKIFTTHGTHATVFLVYVRYGPGTGNIGS--VLIERGQEGFSFGKPVRFLSG 202

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHY 338
              N    L F N        L    G  + M    +  + +   S++  R +   A+ +
Sbjct: 203 EEWNP---LFFDNVHVPKDKVLLGPGGFKQQMSGFNVERIGNTARSLALGRYAFNAAVEH 259

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A+ R   G  L +   ++   A++ L + AA  L +R A + D+     +E         
Sbjct: 260 AKTRKQFGRALCEFQGLQWKFAEMKLKLDAAQLLLYRAATNADKGLPSPDE-------TA 312

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           I K  C +       EAM+ +GG+GY ++  +    R +    I  G+   ++  + 
Sbjct: 313 IAKVACNRAGFDCANEAMQVMGGAGYSQDGLVEYCLRRTRGWMIAGGAIEILLNRIA 369


>gi|152987509|ref|YP_001351048.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150962667|gb|ABR84692.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 402

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   +  D  Y L+G K F++S   +DA ++ A ++  
Sbjct: 126 GGTWAAMAITEPGCGSDSAAIRTTATQDGDH-YVLNGEKIFVTSGERADAVVVWATLDRS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   + +    G+   RL+ K+G +++ T  + F++        L  +   V+  
Sbjct: 185 LGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKG 244

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA---------D 361
              ++   D+    V+GM V +A+A    R R +           K  +           
Sbjct: 245 FAGVMETFDNTRPLVAGMAVGVAKAALD-RTRELLKKAGCKFDYRKPLLVVSHAEATLYR 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +  AA  L+ + A   D     S+E       A I K    ++A  +  + +E  G 
Sbjct: 304 LEAEWEAARLLTLKAAWMADNKLPNSKE-------ASIAKAKAGRVANEITLKCVELAGA 356

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY EE  + +  R+S    I  G+    +L V   L
Sbjct: 357 LGYAEEELLEKWARDSKILDIFEGTQQIQLLIVARRL 393


>gi|258651118|ref|YP_003200274.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554343|gb|ACV77285.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 419

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 120/395 (30%), Gaps = 35/395 (8%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
           TA+ELA+             P   +W +    P    + R     GL          P  
Sbjct: 48  TAEELAQRDKVRAFVDARIRPNIAQWYEDAHFPV--EIAREFGDLGLLGMHLKGYGCPGR 105

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
               + + A  L          +      + S +    +    + W P + + E      
Sbjct: 106 SSVEYGLTALELEAGDSGLRTFVSVQGSLAMSAIHKHGSEEQKQQWLPGMATGE------ 159

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248
                  +    GLTE   G+D A + +   +           +W   + ++   I+ A 
Sbjct: 160 -------LIGCFGLTEPTAGSDPAGMVTHAVRDGSDWVLNGAKRWIGLASVAQVAIIWAT 212

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            E  V  F+VP         G     ++ K+  R++   ++  ++        L    G 
Sbjct: 213 TEDGVRGFVVPT-----DTPGFTATPIEPKLSMRASIQCDITLTDVRLPADAMLPNVVGL 267

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                    L+ A   +    +  A      A+ Y   R      L    + +R + D+ 
Sbjct: 268 K---GPFACLNEARYGIIWGAMGAARDSYETALRYMLDRKQFDTPLAGFQLSQRRLTDMV 324

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
           L+I     ++ +     D      ++           K    + A A+  EA   +GG+G
Sbjct: 325 LEIQKGILVALQTGRLKDAGTLHPQQ-------ISFGKLNNVREAIAICREARAMLGGNG 377

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              + S  RH     +     G+     L +   +
Sbjct: 378 ITLDYSPLRHANNLESVRTYEGTDEVHTLIMGQAI 412


>gi|324999434|ref|ZP_08120546.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 403

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 122/380 (32%), Gaps = 24/380 (6%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
           H Y P G         P   ALLR  + +    + +   F P           A      
Sbjct: 38  HRYAPDGA------HAPEVRALLRT-VRERSAAAGYYGMFVPEAIGGGGLGALALYEAWK 90

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
            L A +     +  AS+      P        +  +              +     G++E
Sbjct: 91  HLHARYGPGRLLPYASVAHWSYAPSTLCTHLTETAADRM----LPAFMAGTTTSCFGMSE 146

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG---RVGCFLVPRL 261
              G+D  A+ +  ++   G       +W  +SP +D   + A  +    R     +   
Sbjct: 147 PDAGSDAMAMRTVARRDEGGWRITGTKQWITNSPEADWVFVWAVTDPVRHRDRAGGISCF 206

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L   S  G     +    G+       + F +       L+G+L+       +      L
Sbjct: 207 LVPTSAPGFAVDSVITLFGSAGGYEGIISFDDVLVPEDALVGELDHGFRLALEGVSTGRL 266

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A   V   + +L +A  YA  R   G  + D   +   +AD A++I AA A++   A 
Sbjct: 267 YNAGRCVGLAQWALDKAAAYATERRAFGRTIGDYQGVSFPLADCAVEIYAADAMARETAG 326

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
                     E A        TK +  +M   V    M+  GG G   E  +   + ++ 
Sbjct: 327 RVQAGLEAHHEVAM-------TKVFTTEMCSRVYERCMQVHGGMGLTTEMRLYDGWHQAR 379

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS   +  ++   +
Sbjct: 380 LVRIADGSAEVLRRNIARRI 399


>gi|332285966|ref|YP_004417877.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429919|gb|AEC21253.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 396

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 129/376 (34%), Gaps = 33/376 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  ++ D+ + +P    +L+    +G + +     F        +          A    
Sbjct: 36  PQADQIDRNDVYPI--DILKDMAKNGYNTAALPPVFGGQGLSYPYVAAVFEEVGAASAAV 93

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G  +     + +M+ L     + + + P                   +     LTE   G
Sbjct: 94  GISLITIYQAQTMIKLFGQESLRQRYLP--------------AFAQGLLSSYALTEASHG 139

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DI  + ++  +  D         +  S+  ++ FI+LA+ E  V  F VPR +      
Sbjct: 140 SDIRTLDTKAHRKGDEWVIQGEKHFITSATAAELFIILAETEVGVSVFAVPRDI-----A 194

Query: 269 GLCY--QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
           GL     +     G R+   + ++  N       ++G           +       +  +
Sbjct: 195 GLSMYEGQNSATFGLRNGPHMNVKLDNVRLPLDHMIGQEGKGVRQAVTVLNYSRTMAGAI 254

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R +   A+ +AR R      ++D   ++   AD+  +I AA  L +R A + D  
Sbjct: 255 SLGVARAAFEGALAFARDRKAFDQRVLDFQGIQWYFADMLTEIDAARLLIYRAAAALDSN 314

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              S             K   C +A  V ++A +  G  G +      R+ R++ A  I 
Sbjct: 315 DQISRWG-------SEAKLKACAIATQVASQAAQICGAYGIMVNAPFGRYLRDAKAYEIA 367

Query: 444 LGSGNAMVLDVLNLLE 459
            GS   +   +   L 
Sbjct: 368 GGSSEILKNTIGKALM 383


>gi|218196154|gb|EEC78581.1| hypothetical protein OsI_18581 [Oryza sativa Indica Group]
          Length = 430

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 126/368 (34%), Gaps = 30/368 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF       + +    GL          P +   A  I  A +  +    +  ++ 
Sbjct: 74  WEKAEFP---FHAIPKLATLGLAGGTTKGYGCPGLSLTASAISVAEVARVDASCSTFILV 130

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  + S +AL  +    + + P +              +        LTE   G+D ++
Sbjct: 131 HSSLAMSTIALCGSEAQKQKYLPSLT-------------QFRTVGCWALTEPDYGSDASS 177

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +   +D  I+LA+             +      GL   
Sbjct: 178 LRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQLNG---FIVKKGAPGLKCT 234

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVS 331
           +++NKIG R     ++  +  F      L       +  K+  +  +  A   +      
Sbjct: 235 KIENKIGLRMVQNADIVLNKVFVPDEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGV 294

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +  +  +I A   + +RL   ++  K       
Sbjct: 295 FDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK------- 347

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                A + K W  K A  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 348 MTPGHASLGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAFCDLEPIFS-YEGTYDIN 406

Query: 451 VLDVLNLL 458
            L     +
Sbjct: 407 SLVTGREI 414


>gi|225555592|gb|EEH03883.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 442

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/351 (17%), Positives = 118/351 (33%), Gaps = 26/351 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASM 161
           H L      DG                 +      +      A L     +  +V +   
Sbjct: 83  HELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQSGAGLAGAQSIHANVYATQP 142

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V    T    +   P++ + +Y              +  G+TE   G +   + ++  + 
Sbjct: 143 VTKFATEEQRQQMLPRLIAGDYR-------------VCFGVTEPNTGLETLKLRTEAIRD 189

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLCYQRL 275
            D         W  S+ ++   ++LA+       +     +     D      GL  +++
Sbjct: 190 GDSYRVSGQKIWISSAQVARRMVLLARTTPLEEVKKPSEGLSLFFIDFDKDAPGLELRKI 249

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           K K+G R+    E+ F N       L+G        V           A  ++    V+L
Sbjct: 250 K-KMGGRAVDANEVFFDNYRIPADSLIGREGDGFKIVLHGMNAERCLLAGEALGLGYVAL 308

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAA 391
            +A  YA+ R V G  +     +   +AD  +++ AA   ++   N +D +K  +S    
Sbjct: 309 EKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNLEAAKLATYHATNLYDASKTDKSITQK 368

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +     KY   + A      A+   GG GY +E ++ R+ RE     I
Sbjct: 369 AVGVACNSAKYLAAEAAFTACERAVLTHGGMGYAQEYNVERYLRECFVPRI 419


>gi|115462277|ref|NP_001054738.1| Os05g0163700 [Oryza sativa Japonica Group]
 gi|46981342|gb|AAT07660.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113578289|dbj|BAF16652.1| Os05g0163700 [Oryza sativa Japonica Group]
 gi|215701132|dbj|BAG92556.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630308|gb|EEE62440.1| hypothetical protein OsJ_17232 [Oryza sativa Japonica Group]
          Length = 430

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 126/368 (34%), Gaps = 30/368 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF       + +    GL          P +   A  I  A +  +    +  ++ 
Sbjct: 74  WEKAEFP---FHAIPKLATLGLAGGTTKGYGCPGLSLTASAISVAEVARVDASCSTFILV 130

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  + S +AL  +    + + P +              +        LTE   G+D ++
Sbjct: 131 HSSLAMSTIALCGSEAQKQKYLPSLT-------------QFRTIGCWALTEPDYGSDASS 177

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +   +D  I+LA+             +      GL   
Sbjct: 178 LRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQLNG---FIVKKGAPGLKCT 234

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVS 331
           +++NKIG R     ++  +  F      L       +  K+  +  +  A   +      
Sbjct: 235 KIENKIGLRMVQNADIVLNKVFVPDEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGV 294

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +  +  +I A   + +RL   ++  K       
Sbjct: 295 FDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK------- 347

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                A + K W  K A  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 348 MTPGHASLGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAFCDLEPIFS-YEGTYDIN 406

Query: 451 VLDVLNLL 458
            L     +
Sbjct: 407 SLVTGREI 414


>gi|294633167|ref|ZP_06711726.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292830948|gb|EFF89298.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 127/364 (34%), Gaps = 25/364 (6%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           A   +LR     G    + D +             A  +   A   A    S    SA+ 
Sbjct: 27  AGREILRALGSAGWLGFL-DPASGSAAGDHRSICLAREILAYADDLADFAFSIQALSATP 85

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +          ++ P++ S E              A    ++EK  G+D++A+     ++
Sbjct: 86  IVRYGNREQQLEYLPRMASGE-------------TAGSFAISEKEAGSDMSAVGLTADRV 132

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           S G        W   + ++D   ++A+  G  G   +   L      G+        I  
Sbjct: 133 SGGYLLTGRKAWIAHAGIADVHCVIARTGGGPGALGLTAFLVPARTPGVRVLEEVRLIAP 192

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           RS     L F +       +LG          D+     +     +V   R ++  A+  
Sbjct: 193 RSL--GHLAFEDCLVPESSVLGRPGQGFVVATDLLERFRMTVGAAAVGFARRAVDSAVQQ 250

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           AR R + GG L+D  ++K A+AD+ + + A+  L  R A   D               + 
Sbjct: 251 ARERRMHGGRLMDLQLVKGALADMEVKLNASALLVARAAWELDHGNPG------YAKHSS 304

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K    + A  ++  A++  G +G + +    R YR+  +  I  G+     L + + L
Sbjct: 305 IAKVAATEAAQEIVDAAVQIHGAAGLVADSVPERLYRQVRSLRIYEGASEVQKLIIADTL 364

Query: 459 EKGT 462
            +  
Sbjct: 365 GRRP 368


>gi|317123544|ref|YP_004097656.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315587632|gb|ADU46929.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 383

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 123/353 (34%), Gaps = 27/353 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              GL        +            AA         AG+L+  +   + ++    T   
Sbjct: 46  AAMGLTGLRIPEEYGGQEATAVIAGIAAEEVGREDFNAGYLIINTALISDIIVRNATDEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229
              W P I S E  P              + +TE   GTD A++  +    +D   + L 
Sbjct: 106 KAAWLPGIASGETIP-------------CICITEPGHGTDAASLELKATPSADATGWTLH 152

Query: 230 GHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           G K  ++  M+ D  ++LA+  G  G   V     D     +      + +G+R+     
Sbjct: 153 GEKTSITLGMASDRAVVLART-GGPGARGVSAFWVDLHHPSVSRSAFDD-LGSRAIGRAS 210

Query: 289 LEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F  T      L+G+       V            ++ +   + SL EAI +AR R   
Sbjct: 211 LHFDGTPVSRADLIGEEGAGFVSVMQGFDYSRAIIGLLCIGAAQASLDEAIQWARDREAF 270

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +     +   +A+ A  +  A  + F      D  +  S EAA A+  AP       
Sbjct: 271 GAPIGTFQGVSFPLAEAATYLKGARHVCFEALWRKDTDQEHSAEAAMAKFWAP------- 323

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K+A  VI + +  IG  GY  E  + +  R+     I  G+     L +   L
Sbjct: 324 KLAADVIHQCLLTIGHIGYSSEHKVGQRLRDVIGLEIGDGTAQVSKLVISRNL 376


>gi|227548732|ref|ZP_03978781.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079199|gb|EEI17162.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 396

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 135/369 (36%), Gaps = 33/369 (8%)

Query: 94  WDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W+K E++ PA    +  +   GL     D   E  +  +A+++ A  L       A  ++
Sbjct: 50  WEKAEYNIPA----IEEAARRGLIRDGIDIEGERPMSIRANRLVALELARCDASTATAVI 105

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +  +   +  + +    K +               PM +  +     LTE   G+D  
Sbjct: 106 VQAGLAMQSINSLGSEEQKKKYL-------------GPMARMEIRGAFALTEPDHGSDSV 152

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLC 271
           A+ +  ++  D        KW     +    ++ A+  +G VG F+V     D   +G  
Sbjct: 153 ALETTAKRDGDDWVINGEKKWIGHGSVGHIAVVWARMDDGEVGGFIV-----DQDADGYH 207

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++ K   R      +  +N        L  +    +   +L    L  A  ++    
Sbjct: 208 AETIEGKASLRGIPQAHITLNNVRVPDDRRLPGARSFRDTAAVLGGTRLGVAWSALGMAI 267

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
               +A+ YA  RH  G  L    ++++ +AD+ +D+ +      RL    +  +   ++
Sbjct: 268 DCYEKALKYATERHQFGRPLNKNQIIQQRLADMLMDVTSMALYCKRLLELEETGQLNEKQ 327

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       K    + A  V A A +  GG G + E  + RH+ +  A     G+   
Sbjct: 328 AALA-------KVHNTRAARRVAANARDMFGGVGILLENDVIRHFADIEALHTYEGTDTI 380

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 381 QSLIVGKTI 389


>gi|237810726|ref|YP_002895177.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
 gi|237504940|gb|ACQ97258.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           MSHR346]
          Length = 623

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/507 (16%), Positives = 165/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YA RR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYACRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|167822607|ref|ZP_02454078.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9]
          Length = 623

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|288923560|ref|ZP_06417674.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345103|gb|EFC79518.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 295

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 90/283 (31%), Gaps = 26/283 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+ E +PA        +  G + +     +                       +
Sbjct: 31  PFAADVDEHERYPA--EARDALVRSGFNAAHVPEIYGGQGADSVTTCIVIEEVARVCASS 88

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             + + +      + L  +  + K   P I   E              A    L+E+  G
Sbjct: 89  SLIPAVNKLGTMPILLSGSEDLKKLVLPSIARGE-------------AAASYALSEREAG 135

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDGS 266
           +D A++ ++ +   D         W  ++  S  + ++A  +         +   +    
Sbjct: 136 SDTASMRTRARLDGDHWVLNGTKTWITNAGESTWYTVMAVTDPDAAKPADGISAFVVRAD 195

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325
             G      + K+G + + T E+ F N          +   P   ++  +  LD    ++
Sbjct: 196 DPGFEVGSKERKLGIKGSPTREIHFVNCTIPAD---RIIGEPGTGLRTALRTLDHTRPTI 252

Query: 326 SGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
               V +A+     AI Y + R   G  + D   ++  +AD+A
Sbjct: 253 GAQAVGIAQGALDAAIGYVKERRQFGRPIADNQGVQFMLADMA 295


>gi|228919813|ref|ZP_04083171.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839829|gb|EEM85112.1| Acyl-CoA dehydrogenase domain protein [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 388

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 137/354 (38%), Gaps = 27/354 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPR 169
            +G+        +  +         A         + G L+S         ++ L  T  
Sbjct: 46  KEGIWKIPVPEEYGGLGMSWWEFSAALEGLASRSTDLGFLLSIIAHIGCLRVLLLHGTEE 105

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229
               +  ++ +                     +TE  GG+D+A I + G+  ++ I    
Sbjct: 106 QKHYYLNELMNG--------------KIGATAITESTGGSDVARIRTAGEYDANQIILNG 151

Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
                 ++P++D  +++ ++   +G   +   + +    GL +   ++  GNR++ T ++
Sbjct: 152 KKSHITNAPIADIVVLVGRI-PELGKQDITLFILEKDLEGLSFGEKEDMFGNRTSPTGDI 210

Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +N       +LG        + +M  L  L   +++ + M   + +++ Y+  R    
Sbjct: 211 YLNNVSITNKSILGHPGDGLQTLYNMISLDRLLYGLVAAAFMEGLMFKSLEYSNDRVAFK 270

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +   +++ + DI ++I     +++      ++     +EA+    M  + KY   +
Sbjct: 271 TPIANHQYIQQKLTDIKMNIETTKLITYSA---LEKLIKNDDEASL---MCSMAKYIGTE 324

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                    M+  G SGY+  + I++ +++S    I  G+ +   +++ N ++K
Sbjct: 325 SLFQTAQHVMQIHGHSGYMVGQ-ISKLFQDSAGTRIAGGTSDIQRVNMFNQMQK 377


>gi|226199555|ref|ZP_03795112.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225928436|gb|EEH24466.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 618

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/507 (17%), Positives = 166/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 73  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 132

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 133 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 178

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+Y ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 179 VATPLGDGVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 238

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 239 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 298

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 299 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 357

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 358 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 417

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 418 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 477

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 478 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 537

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 538 MFGLVACAWALLEAA--CIAERRLATR 562


>gi|297171967|gb|ADI22952.1| acyl-CoA dehydrogenases [uncultured nuHF2 cluster bacterium
           HF0500_39O04]
          Length = 424

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/420 (12%), Positives = 134/420 (31%), Gaps = 48/420 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
            KEL  +     +   + +A  ++       ++      WD          L+R +   G
Sbjct: 18  QKELREIAMDYATTVVEPIAIQSDQMPEVDKSFN-----WD----------LVREASIRG 62

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L        F                     L        +    + +A +        W
Sbjct: 63  LRTLSIPERFGGEGADVLTLAMCGECIAYGDLGVAVGFDQTWKIMTAIANLCNEEQQNRW 122

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI--------AAITSQGQKISDGIY 226
            P+I            M+     +G+ +TE   G+D         + +    ++  D   
Sbjct: 123 IPRI------------MEDDEFLLGIPVTEPLSGSDNLLPYDAPGSGVQMLAKRKGDKWL 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                ++  +  ++  + +LA+          +   L      G     + +K+G R+  
Sbjct: 171 LNGTKRYISNGGLAKMYYVLARTNPDGPLSTSLTGFLVPSDLPGFSVPEVWDKMGQRAVQ 230

Query: 286 TVELEFSNTFGFLLGDLNVSTG-----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
              L F +        +              +     + +    +   + +   +  YA 
Sbjct: 231 NGTLVFEDVEIPDRDRVGDIGASLPAVGALLLGFGSNIQAGATVLGVAQRAYDLSHQYAH 290

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +I+  + ++ +  +A+ + A  +  +    +        ++  + R  A ++
Sbjct: 291 ERIQGGKPIIEHDIQRKRLVRMAMKLQATRSYLWYAGWNC-------KQQDFDRKHASMS 343

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K +  + + AV  EA+E  G +GY+++  I +  R++ +     G+ + + L     + +
Sbjct: 344 KVFASEESIAVCVEALELWGATGYMKKNPIEKLLRDAISFLHSDGTNDVLSLKAATFMTQ 403


>gi|84501873|ref|ZP_01000031.1| cyclohexanecarboxyl-CoA dehydrogenase [Oceanicola batsensis
           HTCC2597]
 gi|84389868|gb|EAQ02502.1| cyclohexanecarboxyl-CoA dehydrogenase [Oceanicola batsensis
           HTCC2597]
          Length = 393

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 117/357 (32%), Gaps = 25/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL++     GL  +     F  +                A   A ++         MVA
Sbjct: 39  RALIKEMGSLGLIGADLPEDFGGLGESSVTSGLIVEEIAYADFNASYVQLLGSLMGGMVA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                 +  +W PK+ S                 IGLGLTE RGG+D A +  + +K  +
Sbjct: 99  KHACRDIAAEWVPKVVSG-------------DAVIGLGLTEPRGGSDAANLILKAEKSGN 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G            +  +DA ++ A+      G   V     D + +G+      + IG +
Sbjct: 146 GWRLNGEKTSMSFASQADAAVVFARTGNPDGGSRGVSAFFVDLNQDGIKRTHFDD-IGTK 204

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 + F + F     L+ + + + G +            +  +   + S+ E   Y 
Sbjct: 205 PVGRGSVFFDDVFVPAENLMAEQDRAFGTIMAGFDYSRALIGLECLGAAQASVDETWAYV 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  ++    +   +A+    +     L +   +  D     + +AA  +   P 
Sbjct: 265 QEREAFGAPIVQYQGVSFPLAEAETQLTMMRQLCYYTLDLRDRGMPHTSQAAMCKWYLP- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 K A  ++ + +   G  GY  +    + Y +     I  G+     L +  
Sbjct: 324 ------KTACEILHQCLILHGHYGYTTDLPHHQRYNDVLGLQIGDGTAQIQKLVIAR 374


>gi|302562000|ref|ZP_07314342.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479618|gb|EFL42711.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 215

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 1/213 (0%)

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMA 408
           +DQP+M+  +AD+AL+  AAT L+ RLA + D A +  + EAA+ RI   + KYW  K  
Sbjct: 1   MDQPLMRNVLADLALESEAATTLTLRLAGAADRAVRGDAGEAAFRRIATAVGKYWVTKRG 60

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           PA  AEA+EC+GG+GY+E+  + RHYRE+P  SI  GSGN   LDVL  L + T   + L
Sbjct: 61  PAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIWEGSGNVNALDVLRALGRDTATAQAL 120

Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           F  L    G+  +    +      L +  +  AR L E++AL    + L R     ++D 
Sbjct: 121 FDELALTRGADARLDAAVAGLKDQLAEGSQAGARRLVERMALTLQGSLLVRHAPPAVSDA 180

Query: 529 FLENRFLDNCHSTHCMLHGRFNAAHIIDSLYLD 561
           F   R   +   +   L        I+     D
Sbjct: 181 FCATRLGGDWGYSFGTLPAAAGVDAILGRALPD 213


>gi|325833261|ref|ZP_08165767.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
 gi|325485643|gb|EGC88111.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
          Length = 395

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 126/372 (33%), Gaps = 27/372 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
                 +I + L+       +      +   +R    +         HL   +  +  ++
Sbjct: 39  QEFYDLAIKNDLYRFALPSQYGGWDLSELDILRVQEEFSRGPGGMRMHLHYAADLNWRIL 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +  +   +  K              Q  +V     LTE+ GGT  A I +  +K  
Sbjct: 99  DDYGSDELKAQYMDKF-------------QDKTVFTCFALTEQSGGTG-ADIHTTAEKDE 144

Query: 223 DGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           +G Y L+G KW +S      F  ++A  +    G   +          G     + + +G
Sbjct: 145 NGDYILNGEKWLISHTDCCEFAYVIAVTDPEKQGDERLSAFFVPCDTPGYETTPMPHMMG 204

Query: 281 NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R  A   L+F+N      +LLG+             +     A  ++   +  L  ++ 
Sbjct: 205 ARGAAHTGLKFTNMKLDKKYLLGEEGQGMEIAIHSLSVSRAHIAASNLGMCQRMLEMSLA 264

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            A  R   G  +  + ++KR IA++     A   + +     +D    +     Y    A
Sbjct: 265 RANDRVTFGKPIATRQMIKREIAEMQTYTHALRCMVYDFGREYD----KDPNGKYIEEKA 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDV 454
            + K +       V    +E  GG GY E+     + R YR++ A  +  G+ N   + +
Sbjct: 321 AMCKLFSIYSTRIVSDGMLEIFGGDGYFEDSPYGPVERMYRDARAMWLEEGAPNVQRITI 380

Query: 455 LNLLEKGTNLFE 466
               +K     E
Sbjct: 381 ARNCQKFGGKVE 392


>gi|121712200|ref|XP_001273715.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119401867|gb|EAW12289.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 457

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/442 (19%), Positives = 157/442 (35%), Gaps = 26/442 (5%)

Query: 36  AYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +S    L  L + + +  H++ +      + E++LS  A E  +           +   
Sbjct: 10  PFSEPPYLRGLPSPYYTASHRQFQKACRKFMWEHLLSH-AMEWEKQGTVPAHVFTDFCKH 68

Query: 91  GERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAAR--LYLMAQL 146
                 +        L R  IHD  G+    WD     +   +  ++         MAQL
Sbjct: 69  HMLLPNLPAPLPIAWLKRLGIHDILGVKVEEWDYLHTGIYCDEVGQVPEPECTKADMAQL 128

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L  P  +  +  A    P +      K  S E        +        + +TE  
Sbjct: 129 GRSGLAGPGASLNAGFAFGIPPIL------KYGSEELQERVLPELLTGKKRACIAITEPE 182

Query: 207 GGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED- 264
            G+D+A IT+   K  DG  Y ++G K ++++ +   +  +A   G  G   +  +L   
Sbjct: 183 AGSDVANITTTATKSPDGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGAAGLSVILVPL 242

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+  +RLK   G  +  T  +E  +     G L+G        +        L  A
Sbjct: 243 KGHPGVTMRRLKVS-GQLTGGTTYIELDDVQVPVGNLIGREGEGMRIIMTNFNHERLTIA 301

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           +      RV+LA A+ Y  +R   G  L+DQPV++  +A    ++    A   ++     
Sbjct: 302 VGVTRQARVALASAVQYTMKREAFGKTLMDQPVVRHRLAKAGAELETMWAWVEQILYQLC 361

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESP 438
              S+ E       +  + K     +       A+   GG+G+    +   +    R+ P
Sbjct: 362 H-LSKEEADTQLGGITALAKAKAAMVLNECAQCAVLLFGGAGFTASGQGELVEAILRDVP 420

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
              I  GS + ++   +  L K
Sbjct: 421 GARIPGGSEDVLLDLAVRQLVK 442


>gi|332285894|ref|YP_004417805.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
 gi|330429847|gb|AEC21181.1| putative acyl-CoA dehydrogenase [Pusillimonas sp. T7-7]
          Length = 390

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 127/373 (34%), Gaps = 39/373 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA---GHLMSPSVTSAS 160
           H   R     GL        +                       +      M   +    
Sbjct: 39  HECWRAICEAGLCGVALPSEYGGSELGVFEMALIIERLAATGAGSTVGQLFMVNPIFGGV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++   TP + K+  P + S + +               + LTE   GT+   I S  + 
Sbjct: 99  SISRFGTPDMKKELLPGLMSGDIN-------------FCMALTEPDAGTNTLEIRSFARP 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             DG        W  +   +   +++A+     E       +   + D    GL +  + 
Sbjct: 146 EGDGWRLNGRKIWITAVDTAHKMLVVARTKKVEESASRSDGLSMFMIDVDREGLTHSPI- 204

Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +K+G  + A+  + F +       L+G L+     + D+     + +    +    ++L 
Sbjct: 205 DKLGTNTLASSSIFFDDVRIEPHELVGTLHGGWKELLDVLNTERIVTTAGLIGTTELALK 264

Query: 334 EAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            A+ Y   R V G   +     ++  +A    ++ AA  ++++ A++FD       +A  
Sbjct: 265 LAVDYGNERKVFGDRAVTSYQGLQFPLAQCYAEMEAARLVNYKAASNFDNGLPYGSQANA 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS---ILLGSGNA 449
           A+++A        + A       M+ +GG GY  E  + R +R+        I       
Sbjct: 325 AKLLAAQVAARATERA-------MQTMGGMGYSREYHVERLWRDCRLFRFAPI----SEE 373

Query: 450 MVLDVLNLLEKGT 462
           MVL+ + + + G 
Sbjct: 374 MVLNYIAMYDLGM 386


>gi|189189650|ref|XP_001931164.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972770|gb|EDU40269.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 443

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 120/307 (39%), Gaps = 23/307 (7%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +      ++ + + P++ +                 I + +TE   G+D+A IT+  +K 
Sbjct: 134 IIKYGNKQLQERFLPELLTC-------------KKRICIAITEPEAGSDVANITTTAEKT 180

Query: 222 SDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKI 279
           +DG  Y ++G K ++++ +   +  +A      G   +  ++       G+  +R+K   
Sbjct: 181 ADGKHYIINGSKKWITNGIWSDYATMAVRTSGPGPTGLSMVVVPLKGYPGVSMRRIKVG- 239

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           GN S+ T  +E  +       L+G+  +    +        L  AI +    RV+L+ A+
Sbjct: 240 GNISSGTTFIELDDVKVPVENLVGEEGMGMKYIMTNFNHERLSIAIGATRQARVALSAAV 299

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   G  L+DQPV++  +A     + +  A   +          ++        +
Sbjct: 300 EYVLKREAFGKPLVDQPVVRHRLAKAGALLESQWAWVEQFVYQMVH-LPKATADIELGGL 358

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLD 453
             + K     +       A    GG+GY +      I R  RE P   I  GS + M+  
Sbjct: 359 TAMVKAQSGIVLNECAQTAQLLFGGNGYTKSGQGELIERISREVPGIRIPGGSEDVMLDL 418

Query: 454 VLNLLEK 460
            +  L K
Sbjct: 419 GVRQLVK 425


>gi|218780925|ref|YP_002432243.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762309|gb|ACL04775.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 531

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/515 (18%), Positives = 186/515 (36%), Gaps = 60/515 (11%)

Query: 32  IGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN-----YNTPQLHA 86
             ++ Y+ D     ++  F   +  E++          + +  +++         P +  
Sbjct: 20  ENVDYYADDPFAQKVVRTFCGDMAGEVDAAARETSKKASFKWRKLSEALAWPEKRPYMKH 79

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           Y     R D++E  P    ++ + +         +  F          ++  +++LM Q 
Sbjct: 80  YDGHRNRIDRIE-RPMETQIVEKEV-------FGEALFSKNTHPW---VKLIKMFLMYQN 128

Query: 147 EAGHLMSPSVTSASMVALMT----TPRVHKDW--APKIFSREYDPTNKAPMQKTSVAIGL 200
               +  P   +  +VA++     TP +        +    E+                 
Sbjct: 129 GEYCVSCPLTCTEGLVAVIEPFADTPELKAILNHCKEGVDGEF------------AIGAQ 176

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLV 258
            L+E +GG+D+ +   +     DG++ L G K+F S+  +D  ++ A+ +G  +VG F++
Sbjct: 177 YLSEIQGGSDVPSNLVEAV-EEDGVWKLYGTKFFCSAAHADYAMVTAKPKGSEKVGLFVM 235

Query: 259 PRLLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-K 313
           P  L         N     R+K K+G     T EL  +    + +G L+     +  +  
Sbjct: 236 PSWLPGDKKKERRNSFTIDRIKWKMGTSELPTAELTMNGAVAYQVGPLDRGLANMVGVVL 295

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI----ALDIAAA 369
               L   +   S M     EA  Y   R   G  +   P++   +AD+       +A A
Sbjct: 296 TYSRLTVGLSGASSMIRVWREASKYCEFREAFGVNINFFPMVMGQLADMEKTAKRTLAGA 355

Query: 370 TALSFR--------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             L           L  S DE  +  ++    R +  + K       P V+  AM   GG
Sbjct: 356 FRLYKEVLDLPGGFLGASKDEDDAMKKKRFMVRELVMLQKICTSWDCPDVVRAAMSMFGG 415

Query: 422 SGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF--EQLFSTLEQDLGS 478
            G +E+  ++ R YR++  N +  G  N ++  +   L+K        +L   +   L  
Sbjct: 416 HGVMEDFSALPRLYRDAAVNELWEGPRNVLLTQMHRDLQKAAAWLPPRELVGNI---LAG 472

Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513
             + +I   +D I    +   L     E IA+   
Sbjct: 473 RDEGLIKEFQDEIEQIFKHPNLFEMSPETIAVCKQ 507


>gi|119718517|ref|YP_925482.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539178|gb|ABL83795.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 381

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 111/358 (31%), Gaps = 25/358 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L       GL        +            AA     A   A +L+  +   + +V 
Sbjct: 39  RELAVDMAGMGLTGLRIPEEYGGQEATAVIAGIAAEEVGRADFNAAYLIINTALISDIVV 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T      W P I S E  P              + +TE   GTD A +  +      
Sbjct: 99  RNATAEQQAAWLPGIASGEVVP-------------CICITEPGHGTDAAGLELKAVPDGA 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G               +D  ++LA+  G  G   V     D     +      + +G+R+
Sbjct: 146 GWTLHGEKTSITLGMTADRGVVLART-GGPGARGVSAFWVDLHDPSVTRAAFDD-LGSRA 203

Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                L F         L+G        V            +  +   + SL EA+ ++R
Sbjct: 204 IGRASLHFDGTPVARAQLIGAEGDGFVSVMQGFDYSRAIIGLACLGAAQQSLDEAVQWSR 263

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   +A++A  +  A  + +    + D     S  AA A+  AP  
Sbjct: 264 DRVAFGKPIGTFQGVAFPLAELATYVRGARHVCYEALWNKDHDLEHSALAAMAKFWAP-- 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                K+A  VI + +   G  GY  E  + +  R+     I  G+     L +   L
Sbjct: 322 -----KLATEVIHKCLLTFGHLGYSSENPVGQRLRDVIGLEIGDGTEQVSKLVISRDL 374


>gi|319761013|ref|YP_004124950.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822871|ref|YP_004386174.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115574|gb|ADU98062.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308243|gb|AEB82658.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 384

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 128/363 (35%), Gaps = 32/363 (8%)

Query: 99  FHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSV 156
             P +           GL    +            H + A   + L+    A  + + + 
Sbjct: 33  HSPHYPWETAALLAEQGLLGIAFPEEDHGQGGTLMHAVLAIEQVALVCPKSADIVQAGNF 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                     TP   + + P + +                 I LG++E   G+ +  + +
Sbjct: 93  GPIRTFVEYATPEQKQRFLPDLLAG-------------RKLISLGMSEPDAGSAVTELKT 139

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             ++  DG Y ++G K F +  P +D F++  +    VG   +  +L +    G      
Sbjct: 140 SARQEGDG-YVINGSKVFSTHSPEADLFLVYVRFGPGVG--GIGSVLVERGTPGFQVGEP 196

Query: 276 KNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSL 332
            + + G R +   +L F          L    G  +      +  L ++  +++  R + 
Sbjct: 197 SSFMNGERWS---QLYFDECRIPAANVLLGPGGFKKQISGFNVERLGNSARALALGRHAF 253

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  +A  R   G  L +   ++   A++A+ +  A  + +R A   +     ++  A 
Sbjct: 254 NTAREHALTRKQFGRELCEFQGIQWKFAEMAMKLEQAQLMLYRAAMEGEHGLPSAQSTAM 313

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A++   +  +        V  EA++ +GG+G+ +E  +    R +    I  GS   +  
Sbjct: 314 AKLACNLAGW-------EVSNEALQVMGGTGFSQECLVEYCVRRTRGWMIAGGSIEILKN 366

Query: 453 DVL 455
            + 
Sbjct: 367 RIA 369


>gi|311697032|gb|ADP99905.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15]
          Length = 379

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 119/358 (33%), Gaps = 27/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             ++R+    GL        F                        G++   +  +  ++A
Sbjct: 39  KDVIRQLGEMGLLGGELPEEFGGSGMDCVTSGLIIEEISKGDFNVGYIPLLTSLNGQIIA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P + K+W   + S                   + LTE  GG+D A +  + +K  D
Sbjct: 99  SHAAPDLAKEWLHGMTSG-------------QKVACIALTEPHGGSDAANLRLKAEKKGD 145

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            +Y L+G K  +S +  +D  ++ A+          +   L      G+   R ++  G 
Sbjct: 146 -VYVLNGEKTSISMADQADVAVVFARTGTVEQRASGISAFLVPMDSPGITTTRFEDN-GQ 203

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+     + F N       ++GD       V            +  ++  + SL E   +
Sbjct: 204 RAIGRGSIFFDNVEVHASQMMGDEGKGFKQVMQGFDYSRALIGLQCLAVAQQSLDETWQW 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R   G  L     +   +A+    + AA    +      D  +  + EAA       
Sbjct: 264 LTERTAFGQNLSAFQGLTHPLAEYQTYVHAARMQCYHALWLKDNNRPHNAEAAM------ 317

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             K+W  K+A  V+ + +   G +G+ E+   A+  R+     I  G+   M   +  
Sbjct: 318 -NKWWGPKLAFDVVKQCLLAHGHTGWGEDLPFAQRLRDVLGLQIGDGTAQIMKNIIAR 374


>gi|242240504|ref|YP_002988685.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
 gi|242132561|gb|ACS86863.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703]
          Length = 397

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 26/314 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
               S    SAS++         +D+ P +   E                   L+E + G
Sbjct: 96  DFSWSIQSLSASVIQRYGNEAQRRDYLPALAHGE-------------RIAAFALSELQAG 142

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           TDIAA+T + Q+   G        W     ++   I++A+     G   +   + D    
Sbjct: 143 TDIAALTLEAQRCEGGWLLNGDKAWIALGDIASDIIVIARTGEGPGPLGLSAFIVDAVAG 202

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSV 325
           G+   R  + +  RS     L F N        L     G +  + IL    +  A  ++
Sbjct: 203 GVSA-RPLDAVAPRSW--SHLHFDNVRVSPENLLGQPGQGFIIALDILDRFRMTVASAAI 259

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +   A+ +A +R +  G L+D  + +  +A + + ++AA+ L+ R A   D+ + 
Sbjct: 260 GFARRAADIALRHAAQRKIYRGRLLDLQLTQATLAKMEVSLSAASLLTARAAWQHDDDRP 319

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E+A A       KY+ C+ A  ++  A++ +G +G +    + R YR+     I  G
Sbjct: 320 FARESAAA-------KYFACEQACKIVDAALQLLGAAGVVAGSQLERLYRQIRPLRIYEG 372

Query: 446 SGNAMVLDVLNLLE 459
           +  A+++++ + L+
Sbjct: 373 ASEALLMNIASALD 386


>gi|294011860|ref|YP_003545320.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675190|dbj|BAI96708.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 356

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 122/348 (35%), Gaps = 45/348 (12%)

Query: 45  ALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW--DKVEFH 100
             IAN P+  +    +     + +   +E  ++A      L+      G RW  D V   
Sbjct: 15  ETIANLPALAMLAGFDHASSDLANSVLEEAGKLAAGVFAPLNRSGDVEGARWSLDGVILP 74

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             +       +  G +    D             +        A +        +  + S
Sbjct: 75  AGFREAYATFVAHGWNSLAADPDHGGQGLPFILSVAVQEQLSSANMAFALCTILTQGAIS 134

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    +    + + PK+ S E+  T             + LTE + G+D+ AI S    
Sbjct: 135 AIQAHGSDEQKQLYLPKLVSGEWTGT-------------MNLTEPQAGSDVGAIRSVATP 181

Query: 221 ISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED----- 264
             DG Y ++G K F+S    D       ++LA++ G       +  FLVP+ L D     
Sbjct: 182 AGDGSYRITGSKIFISWGDHDVADNIVHLVLARLPGAPAGSKGLSLFLVPKYLPDADGAP 241

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
           G  NG+    +++K+G  ++ T  + F        G+ +G        +  M     +  
Sbjct: 242 GQRNGVRCVSIEHKLGIHASPTCTMSFGEEDDACVGWRIGPEQGGMRAMFTMMNHARISI 301

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVS------GGI--LIDQPVMKRAIA 360
            +  V+    +   A+ +AR R  S      G    +I  P ++R + 
Sbjct: 302 GLQGVAIAERAYQGALAFARERIQSVAAGGDGTPVAIIAHPDVRRMLM 349


>gi|317157991|ref|XP_001826708.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 441

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 83/470 (17%), Positives = 163/470 (34%), Gaps = 49/470 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMANY 79
            N P        +S    L  L + + +  H   +      L E ++S  A E  +  + 
Sbjct: 4   TNSPNPI----PFSEPPYLRNLPSPYYTEGHLRFQKACRAFLWENLISH-AAEWEKEGHV 58

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRA 137
                  +         +        L R  IHD  G+    WD  +  +   +  +   
Sbjct: 59  PEHVFETFCKHNMLLPNLPAPLPVDWLKRLGIHDILGVRVEDWDYLYTGIYCDEMARSGL 118

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A             + P +                    K  SRE        M      
Sbjct: 119 AGPGTSLSAGFAFGIPPVL--------------------KYASRELQERVLPDMLTGRKR 158

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             + +TE   G+D+A IT+   K +DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 159 TCIAITEPEAGSDVANITTTATKSADGKFYIINGAKKWITNGIWSDYTTMAVRTGGPGAS 218

Query: 257 LVP-RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            +   ++      G+  +R+ +  G ++  T  +E  +     G L+G        +   
Sbjct: 219 GLSVMVVPLKGYPGVTMRRI-HVSGTKTAGTTYIELDDVKVPVGNLIGREGDGMRTIMTN 277

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A    ++   +A 
Sbjct: 278 FNHERLTIAVQCTRQARVALSSAFGYCLKREAFGKTLMDQPVVRHRLAKAGAELETVSAW 337

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERS 429
             ++     + + + E       +  + K     +       A+   GG+G     +   
Sbjct: 338 IEQILYQLCKLE-KVEADRLLGGVTALAKAKAAMVLNECAQCAVLLFGGAGLTQSGQGEI 396

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           +    R+ P + I  GS + ++  ++  L K       ++ T E+ LG +
Sbjct: 397 VEAIMRDVPVSRIPGGSEDVLLDLLVRQLVK-------IYQTQEKKLGQA 439


>gi|91786496|ref|YP_547448.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91695721|gb|ABE42550.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 414

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 114/345 (33%), Gaps = 38/345 (11%)

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +       A    +     +  + L  +P     + P++   E                
Sbjct: 84  EMLAFHSPLADFAFAMQGLGSGAITLAGSPEQQAAYLPQVARGE-------------KIA 130

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
              L+E   G+D+ A+ +      DG        W  +  ++D ++  A+ E   G   +
Sbjct: 131 AFALSEADAGSDVGAMQTSATHTGDGWALNGSKTWISNGGIADFYVTFAKTEPDAGTRGI 190

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---L 315
              + D    GL        I     AT  L+F++        L    G  +       +
Sbjct: 191 TAFIVDAPTQGLDSGEAIAVISPHPLAT--LKFTHCRLADSTQLGTLHGGFKLAMQTLDI 248

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++   R +LAEA+ +A+ R + G  L D  + +  + ++A  + AA  L++R
Sbjct: 249 FRASVAGAALGMARRALAEAVQFAQARKMFGQTLADFQLTQAKLGEMAALVDAAALLTYR 308

Query: 376 LANSFDEAKSRSEE--------------------AAYARIMAPITKYWCCKMAPAVIAEA 415
            A   D   +  E                          + A + K    + A  VI  A
Sbjct: 309 AAWMRDHHNAPGEHPDNAATTATTAITATTEAEGRRDRTVAAAMAKMTATENAQRVIDMA 368

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           ++  GG G      +   YR+  +  I  G+     L +   + +
Sbjct: 369 LQMHGGQGVKVGSKVESLYRDIRSLRIYEGATEVQQLIIGKAVLQ 413


>gi|330898843|gb|EGH30262.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 335

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 113/300 (37%), Gaps = 32/300 (10%)

Query: 64  YVLSCTAQELARMANYNTPQLHAY-GPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIW 120
            ++    +E A+        L+      G  W +  V+    +    ++ +  G      
Sbjct: 37  DMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKQAYKQFVEGGWPSLAH 96

Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           D +       ++  +  + +   A    G     S  + + ++   TP     +  K+ S
Sbjct: 97  DVAHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQDAYLTKLVS 156

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+  T             + LTE   GTD+  + ++ +  +DG Y ++G K F+S+   
Sbjct: 157 GEWTGT-------------MCLTESHCGTDLGMLLTRAEPQADGTYKVTGTKIFISAGEH 203

Query: 241 D-----AFIMLAQV------EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSN 284
           D       I+LA++         +  F+VP+ L       G  N +    +++K+G   N
Sbjct: 204 DMADNIVHIVLARLPDAPAGTKGISLFIVPKFLSAADGGIGERNAVNCGSIEHKMGIHGN 263

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344
           AT  + F    G+L+G  N     +        L +A+  ++   V+    + YAR R  
Sbjct: 264 ATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEVAFQGGLQYARDRLQ 323


>gi|205352110|ref|YP_002225911.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205271891|emb|CAR36731.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
          Length = 387

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 116/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+LA+       +     +   + 
Sbjct: 130 GTDTTRIKTTAVKREDRYVINGQKVWISRVQHSDWMILLARTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|219666378|ref|YP_002456813.1| acyl-CoA dehydrogenase [Desulfitobacterium hafniense DCB-2]
 gi|219536638|gb|ACL18377.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 383

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 129/368 (35%), Gaps = 27/368 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E H       +  I  G                    +  +   +        L+S  + 
Sbjct: 34  ENHAVSEKFNKAFIEAGFGFLGIPEEHGGTPADVTTLMLVSEEVVHQTCATIPLLSNILN 93

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
              +V    TP   K             T     +  S A  L ++E + G+D   +T+ 
Sbjct: 94  MYDVVE-FGTPEQIKL------------TMDITKETGSPAFLLAISEPQAGSDNMRMTTT 140

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRL 275
                DG   L+G K +++      + ++ A+ +   +    +   L      G+ +  L
Sbjct: 141 AV-HKDGKVILNGSKTWITHGGVAPYALVFAKEDNSDLTNKAISMYLVPSDTPGIKFAPL 199

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSL 332
            +KIG  +    E+   N        +     G ++ MK L    L  +  S+   + ++
Sbjct: 200 -HKIGQTTTVFAEMYLDNVVCDESCLVGKKGEGFMQLMKNLEVERLLISSFSLGLAQAAM 258

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A  YA +R   G  +    ++++ + D+ + I     + +  A   D   S   ++A 
Sbjct: 259 DDAAAYAGQRMQFGKTIGSFQLIQQKLTDMEIKIKNMRNMLYEAAWKADNGISIKLDSAL 318

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A+        + C  A  V  EAM+  GG GY  E  ++R ++++       G+   MV 
Sbjct: 319 AKR-------YICMTATEVCYEAMQIFGGLGYTTETRVSRAWQDARGWEFAGGTNEIMVH 371

Query: 453 DVLNLLEK 460
                + K
Sbjct: 372 IAGREIVK 379


>gi|328887272|emb|CCA60511.1| acyl-CoA dehydrogenase, short-chain specific [Streptomyces
           venezuelae ATCC 10712]
          Length = 389

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 82/427 (19%), Positives = 138/427 (32%), Gaps = 52/427 (12%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           Y  +  L  L+    + +  EL             E        TP            D+
Sbjct: 9   YDENPRLQELVVRLRTYLRDELLPY----------EREHGITPETP-----------LDR 47

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
                 W     RS   G +               A    A +  L A   A        
Sbjct: 48  ATLERVWK----RSAELGFYGVSLPPELGGQGIGFAELC-ALKEELTASGAAL------- 95

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            S S++  M  P +      K  + E       P+ +   A    LTE+  G+D+  +T+
Sbjct: 96  -SHSVLGDMGGP-LRVGAIVKYATEEQRERYLMPVVRGERACCFSLTEEDAGSDVRRMTT 153

Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                 DG Y L+G K F S +P +D  +++A++ G    +     L D    G      
Sbjct: 154 TATPDGDG-YVLNGKKVFSSAAPFADFAVVVARMAGEEDTY--SAFLVDLDTPGCTVLDG 210

Query: 276 KNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  + G       +L F +       LLG++            L  L      +   R +
Sbjct: 211 EVPMSGQ--QMEGDLLFESCRVPAANLLGEIGQGLRIGIGRITLNRLLHCPSLIGAARRA 268

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              ++ YA  R V G  L+    ++  IAD+A +I AA ++    A   D     S EA 
Sbjct: 269 WDLSVEYAMNRVVFGRPLLAHQAIQHKIADMATEIYAARSMVTATAVKADRGDDISVEAN 328

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +  +       +A++  G +G      + + +R      I+ G+     
Sbjct: 329 M-------CKLFTSEACFRAADQAVQIHGKAGLTRGHEVEQIFRSLRMFRIVTGTTEIHK 381

Query: 452 LDVLNLL 458
             +   L
Sbjct: 382 NAIAKGL 388


>gi|296083170|emb|CBI22806.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 128/367 (34%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++ +     +          P +   A  I  A +  +    +  ++ 
Sbjct: 89  WEKAEFP---FHVVPKLAALRIAGGTIKGYGCPGLSVTASAITTAEVSRVDASCSTFILV 145

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +AL  +    + + P +              + +      LTE   G+D ++
Sbjct: 146 HSSLAMLTIALCGSEAQKQKYLPSL-------------AQLNTIACWALTEPDYGSDASS 192

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  +S  +D  I+ A+         +   +      GL   
Sbjct: 193 LKTTATKVEGGWILEGQKRWIGNSTFADVLIIFAR---NTTTNQINGYIVKKGAPGLTAT 249

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     +++F   F      L       +  K+L    +  A   +     +
Sbjct: 250 KIQNKIGLRIVQNGDIQFKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISMGA 309

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ + ++  +I A T + +RL   +++ K       
Sbjct: 310 YDMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVGWRLCKLYEKGK------- 362

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A   +A   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 363 MTPGHASLAKAWITLKARETLALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 422

Query: 452 LDVLNLL 458
           L     +
Sbjct: 423 LVTGREI 429


>gi|330898845|gb|EGH30264.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 336

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 113/314 (35%), Gaps = 33/314 (10%)

Query: 55  HKELEL-LGEYVLSCTAQELARMANYNTPQLHAY-GPGGERW-DKVEFHPAWH-ALLRRS 110
             EL   +    +    +E  ++ +     L       G  W D V   PA      +  
Sbjct: 28  LPELAETVDAETVEAILEEAGKVTSKTIAPLSRNGDEEGCHWKDTVVTTPAGFPEAYKIY 87

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
              G      +  F  +   +    +   +   A L  G     +  +   +    T  +
Sbjct: 88  AEGGWVGVGGNPEFGGMGMPKVVSAQVEEMLNSASLAFGLYAMLTSGACVSIDTHATEAL 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
              + P ++S  +             A  + LTE   GTD+  I ++ +  +DG Y ++G
Sbjct: 148 KTKFLPNMYSGVW-------------AGSMCLTEAHAGTDLGIIRTRAEPQADGAYQITG 194

Query: 231 HKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQR 274
            K F++    D       ++LA++         +  FLVP+ +       G  N +    
Sbjct: 195 SKIFITGGEHDLTENIIHLVLAKLPDAPPGPKGISLFLVPKFMVGDDGSIGERNTVSCGS 254

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           +++K+G +++AT  + F    G+L+G+ N     +  M     L   I  ++    S   
Sbjct: 255 IEHKMGIQASATCVMNFDAATGYLIGEPNKGLAAMFTMMNYERLGVGIQGLASGVRSYQA 314

Query: 335 AIHYARRRHVSGGI 348
           A+ YA+ R  S   
Sbjct: 315 AVEYAQDRLQSRAP 328


>gi|254818634|ref|ZP_05223635.1| FadE12_1 [Mycobacterium intracellulare ATCC 13950]
          Length = 388

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 121/385 (31%), Gaps = 34/385 (8%)

Query: 69  TAQELARMANYNTPQLHA--YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
              E   +   +  +L            D+    P      R     G         +  
Sbjct: 4   ELTEDQELIRRSVAELARKFDDQYWMEKDQAHEFPT--EFYRAIADGGWLGMTIPTEYGG 61

Query: 127 VVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                                + A   +  S+     V +  +  +     P + + E  
Sbjct: 62  HGLGITEATILLEEVAKSGGAMNAASSIHLSIFGMQPVVVHGSDDLKARTLPAVATGEVH 121

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        +  G+TE   G D + IT+  ++  D         W   +  SD  +
Sbjct: 122 -------------VCFGVTEPGAGLDTSRITTFAKRDGDRYIVNGRKVWISKAMESDKIL 168

Query: 245 MLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL-- 298
           +L +     E       +   L D   + +  + +  K+G  + ++ EL   N    +  
Sbjct: 169 LLTRTQSYDEVTKKTDGMTLFLTDLDRSRVDIRPI-RKMGRNAVSSNELFIDNLEVPVED 227

Query: 299 -LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +G+       + D      +  A  ++   RV+L +A+ Y   R V G  +     ++ 
Sbjct: 228 RVGEEGKGFQYILDGLNPERMLIAAEALGIGRVALEKAVKYGNEREVFGRPIGMNQGLQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +AD    + AA  +  +    +D  K    EA  A+ +       C          A++
Sbjct: 288 PLADSLARLDAAELMLRKATWLYDNGKPCGREANTAKYL-------CADAGFTAADRALQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG GY EE  I R++RE+    I
Sbjct: 341 THGGMGYAEEYHITRYFREARLMKI 365


>gi|154293276|ref|XP_001547178.1| hypothetical protein BC1G_14434 [Botryotinia fuckeliana B05.10]
 gi|150845579|gb|EDN20772.1| hypothetical protein BC1G_14434 [Botryotinia fuckeliana B05.10]
          Length = 421

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 101/296 (34%), Gaps = 22/296 (7%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    T     ++ P +                S+   LG+TE   G+D+A I +   + 
Sbjct: 119 IVNFGTEEQKNEFLPGV-------------ANGSIRFCLGITEPDAGSDVANIKTTAVRS 165

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
                     KW +++ +   +I  A   G  G   +  L+     +G+  + + N  G 
Sbjct: 166 GKHYIVNGSKKW-ITNAIWADYITTAVRTGGAGATGISLLIIPLKADGVSRRTMHNS-GV 223

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            ++ +  + F +       LL   N     +           A  ++   RV   +A  +
Sbjct: 224 GASGSTFITFDDVKVPIENLLHKENRGFEVIMSNFNAERKSIACSAIRLSRVCAEDAWKH 283

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMA 397
           A  R   G  LI+ PV++     +   I  A A   +L    +  +  S +       M 
Sbjct: 284 ACTRETFGKKLIENPVIRAKFVKMGRMIEPAQAFLEQLTWLIELGRKNSGDNDVRIGGMT 343

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAM 450
            + K    +     + EA + +GG GY        I    R+    ++  GS   M
Sbjct: 344 AMLKVVSTRCLEKCVREAQQIMGGLGYARGGKGGRIEAISRDVRVMAVGGGSEEIM 399


>gi|15922116|ref|NP_377785.1| acyl-CoA dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15622904|dbj|BAB66894.1| 374aa long hypothetical acyl-CoA dehydrogenase [Sulfolobus tokodaii
           str. 7]
          Length = 374

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 160/381 (41%), Gaps = 43/381 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR----SFEPVVRKQAHKIRAARLYLMA 144
           P  E+ D+ +++P    L++R    G    +++         ++ + A    +  L   A
Sbjct: 19  PLAEKIDREDYYP--RELVKRMGELGYLSPLYEGLTLYDTVNIIEEIAKVSGSVALIQDA 76

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           Q E                L+T P        ++F  +        + K  +  G GL+E
Sbjct: 77  QGE----------------LVTEP-------IRMFGNKEQKEILDKLAKGELIGGFGLSE 113

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLL 262
              G+D  +I ++ ++I  G + ++G K + +    +D F+++A+  + ++    +   L
Sbjct: 114 PCCGSDAGSIITKAERIK-GSWIINGRKMWTTQGLYADIFLIVARTGDPKLKEKTLTVFL 172

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLD 319
              +   +  ++++  +GNR   T E+E ++       ++G+LN     V+   ++  + 
Sbjct: 173 VPRN-KCITTRKIE-VMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIA 230

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            + +++     ++ EAI +++ R +    LI++  ++  +A    ++ +  ++   ++  
Sbjct: 231 ISAIAIGLSICAIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREIS-K 289

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           +   +    E           K+    +A  +I  A++ +GG GY +   + R +R+   
Sbjct: 290 YPLDRLFEIEGK-----ISALKFVSSNVAENIIDTALQIMGGLGYAKGSKVERAFRDVRL 344

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  G+    +  +  +L +
Sbjct: 345 TRIGEGTDEVQLSIINKVLMR 365


>gi|325528751|gb|EGD05815.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49]
          Length = 390

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 127/364 (34%), Gaps = 41/364 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G   ++  + +       A +       +         
Sbjct: 32  RKIDEARGYPE--AFVTALTQAGWLAALIPQDYGGPGLSMA-EASVIMEEINRSGGNSGA 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               +   + +    T    + + P+I + E                 +G+TE   G+D 
Sbjct: 89  CHGQMYVMNTIVFSGTEAQKQRYLPRIAAGELR------------VQSMGVTEPSTGSDT 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG---------RVGCFLVPRL 261
             + +   K  DG + ++G K ++S    SD  I+LA+             + CF+V   
Sbjct: 137 TKLKTTAVKK-DGRWVINGQKVWISRVQHSDLLILLARTTPLEQVQKKSDGLSCFIVE-- 193

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
           L+    NGL  + + N + N    T EL F N       LLG        + D       
Sbjct: 194 LDKAIGNGLTVRPILN-MVNH--ETNELFFDNLELPEDALLGTEGKGLKVIFDGLNAERT 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +      L +A  YA  R V G  +     ++  +A+  +++ AA  + +R   
Sbjct: 251 LIAAECIGDGYWFLEKARDYASERKVFGRPIGQNQGIQFPLAESFIELEAANLMRWRACE 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  ++   EA  A+ +A    +             ++  GG G+  E  + R +RE+ 
Sbjct: 311 KIDARQNAGVEANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETR 363

Query: 439 ANSI 442
              +
Sbjct: 364 LYQV 367


>gi|260433697|ref|ZP_05787668.1| glutaryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417525|gb|EEX10784.1| glutaryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 252

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 20/253 (7%)

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           + +  G        W  ++P++D F++ A+ +   G   +   + D    GL   +++NK
Sbjct: 13  RDVDGGYRLTGSKMWISNAPIADVFVVWAKSDAHDGK--IRGFVLDKGTKGLSAPKIENK 70

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH 337
           +  R++ T E+             +     V+ +K     L+ A   +S   +  AE   
Sbjct: 71  LSLRASITGEIVLDGVEV----GEDALLPHVQGLKGPFGCLNRARYGISWGVMGAAECCW 126

Query: 338 YARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           +A R     R      L    + ++ +AD+  +IA     S R+    D+A++       
Sbjct: 127 HAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQASLRVGRLMDQAEA------- 179

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A  M  I K   C  A  +   A +  GG+G   E  + RH       +   G+ +   L
Sbjct: 180 APEMISIIKRNNCGKALDIARMARDMHGGNGISLEFQVIRHMVNLETVNTYEGTHDVHAL 239

Query: 453 DVLNLLEKGTNLF 465
            +L   + G   F
Sbjct: 240 -ILGRAQTGLQAF 251


>gi|242213407|ref|XP_002472532.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728423|gb|EED82318.1| predicted protein [Postia placenta Mad-698-R]
          Length = 495

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 46/435 (10%)

Query: 27  QPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNT 81
           QP  F+  + Y++D  L  L+           V  +L   G+ V +  +  L+++     
Sbjct: 8   QPASFVEGHPYTTDPALPGLLKRLFPPTVLQDVEADLIHFGDIVETRMS-VLSQLVE--P 64

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK---IRAA 138
           P+L  Y   G+R D+++    W  L      +G+    ++R      R        +   
Sbjct: 65  PRLVQYNQWGQRVDELQTSEGWRGLKALFHEEGIVGIFYERRNREFSRAHGFAKILLAIG 124

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              ++  +  GH++       S +        H  W               P Q+ +   
Sbjct: 125 DSQVVCDIANGHIIRNDKNDTSYINQFKLSNEHDRWL-------------CPGQQRAGGS 171

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRV- 253
            + LTE    + +    S         Y L   KWF S+  S+  + LA+     +G   
Sbjct: 172 DVSLTETLA-SPVPETASTTPSHYGQKYTLDRFKWFSSATDSNFALALARTGSQADGSRA 230

Query: 254 -GCFLVP----RLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
              FLVP       E G+P      N +   RLKNK+G ++  T EL      G+L+G+ 
Sbjct: 231 LSLFLVPLRLPMFREPGAPRPPSTSNNVFVHRLKNKVGTQALPTAELSLEGAEGYLIGEP 290

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIA 360
                 +  +  +  L SA  SV  +R  LA    Y+R R + G   +L D P+    +A
Sbjct: 291 GQGVKLITPVLNITRLHSATTSVGSLRRCLAIVTAYSRVRAIKGGAQLLKDTPLHVAELA 350

Query: 361 DIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +++   A   + F   +     +   +  EEA   R++ P  K +  + A   + E M 
Sbjct: 351 KVSVLYRALVHMLFGTISLLGKTECGVAHEEEALRLRLLTPAIKAFAAEKACTAMEECMA 410

Query: 418 CIGGSGYIEERSIAR 432
            +GG+GY+ E  I R
Sbjct: 411 ALGGAGYMSENEIGR 425


>gi|55581716|emb|CAH55629.1| putative acyl-CoA dehydrogenase, PigA [Serratia sp.]
          Length = 386

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 118/361 (32%), Gaps = 28/361 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEP---VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L +++   G         F          A  I A          +  L +        
Sbjct: 40  ELWKKAAAYGFAHGPVSHQFGGSELGALDTALMIEALGKGSRDIGLSFSLCAHLCACVIP 99

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  +   +   + +               +      TE   G+DI  + +  Q  
Sbjct: 100 LYRFGSSELKDKYLESLVTG-------------KLIAANAATEPDAGSDIYNMQATAQPC 146

Query: 222 SDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             G Y L+G K F+++ P++D FI+ A+     G   V   L +    GL    +  K  
Sbjct: 147 EGG-YILNGKKIFITNAPIADVFIIYAKTNPDHGFLGVSAFLIEKGTPGLNVGEVIPKDC 205

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
             +    E+ F++ F      +G          D  I      + + V G+   L   + 
Sbjct: 206 LSNCPWSEIVFNDIFIPQSQRIGMEGAGGAIFHDSMIWEKGCLSALFVGGLARLLETTLE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA+ R   G  +     +   I D+ L +     + +R     D+ +    + A ++++ 
Sbjct: 266 YAKARQQFGKAIGQFQSVSNRIIDMKLRLEQCRLMLYRACWKHDQGQDAEADIAMSKLLI 325

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                   + A     +A++  GG+   +E  + RH      + I  G+ +     +   
Sbjct: 326 -------SEYAVQSGLDAIQTFGGAAMDQELGLVRHLLNMIPSRIFSGTNDIQKEIIARK 378

Query: 458 L 458
           L
Sbjct: 379 L 379


>gi|119387813|ref|YP_918847.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119378388|gb|ABL73151.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 378

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 122/379 (32%), Gaps = 33/379 (8%)

Query: 84  LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143
           L  +       D  +   A   L+      G          E +  +    IR       
Sbjct: 23  LEDWCAAHLPVDHGDVDAACRGLVAALGQAGFLRHSGAAEGEALDVRSLCLIR--ETLAR 80

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
               A    +        V+L  TP            RE+    +             LT
Sbjct: 81  HDPLADFAFAMQGLGMGAVSLFGTPGQ----------REWLDRTRT----GRAISAFALT 126

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263
           E   G+D+A+  +  ++   G        +  +  ++D +++ A+     G   +   L 
Sbjct: 127 EPGAGSDVASTATLAERTPGGWRLTGEKTYISNGGIADIYVIFARTGEAPGARGLSAFLM 186

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------Y 317
                GL        I         L+       +L D  +   P E  KI +       
Sbjct: 187 PADCAGLSVAERIEVIAPH--PLARLKLDGV---VLPDAALIGRPGEGFKIAMSVLDVFR 241

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
                 ++   R +L EA+    R    GG L D  +++  +AD+A+ + AA  L +R A
Sbjct: 242 PTVGAAALGMARRALDEALARVHRPRAGGGALADHQIVQGHLADMAVRVDAAALLVYRAA 301

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            + D    R          A + K +  + A  VI  A++  GG G     ++   YR+ 
Sbjct: 302 WTKDMGAPR------VTREAAMAKLYATEAAQEVIDAALQLHGGDGVRHGTAVEALYRDI 355

Query: 438 PANSILLGSGNAMVLDVLN 456
            A  I  G+ +   + +  
Sbjct: 356 RALRIYEGASDVQRVVIAR 374


>gi|215425048|ref|ZP_03422967.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T92]
          Length = 370

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 32/322 (9%)

Query: 233 WFLSSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           WF S+   +AF++LA+ EG       V  FLV R   DGS NG+  +RLK+K+G RS A+
Sbjct: 1   WFASNCAGEAFVVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVAS 60

Query: 287 VELEFSNTFGFLLGDL---------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            E+EF +   FLL                  + ++   + L +A  ++   R +L E++ 
Sbjct: 61  GEIEFVDAEAFLLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLC 120

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   GG LID+P+M+R +A++ +D+ AA A+ F    + +  + R      A    
Sbjct: 121 YAGQRRAFGGALIDKPLMRRKLAEMVVDVEAALAMVFDGFGAANHRQPRCLPQRIA---V 177

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           P+TK   C++   V ++A+E  GG+GYIE   +AR  R++  N+I  G  N + LDV   
Sbjct: 178 PVTKLKTCRLGITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRG 237

Query: 458 LEKGTNLFEQLFSTLEQDLGSSGK--------KVITILRDSISL---CKEDKGLARF--L 504
           +E+ T   E L + L   +  S          + I  L  +I+           AR   L
Sbjct: 238 IEQ-TRAHETLLARLRDAVSVSDDDDTTRLVSRRIEDLDAAITAWTKLDRQLAEARLFPL 296

Query: 505 TEKIALASSAAALYRAGMNDIA 526
            + +    + A L      + A
Sbjct: 297 AQFMGDVYAGALLTEQAAWERA 318


>gi|116327431|ref|YP_797151.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331955|ref|YP_801673.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116120175|gb|ABJ78218.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125644|gb|ABJ76915.1| Acyl-CoA dehydrogenase, carnitine metabolism [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 391

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 106/291 (36%), Gaps = 17/291 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTE--KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238
           E       P+ +  +     +TE     G D   +T+   K  +  Y ++G KW+ +   
Sbjct: 111 EQKEKYYDPLIQGKIRSAFAMTELPPGAGADPQTLTTNAIKDGNE-YVINGRKWYCTGAN 169

Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-NATVELEFSNTFGF 297
            +   I++++V            L      G    R    +G+       EL+F N    
Sbjct: 170 GASFLIVMSKVAD--SFRRTTMFLVPTDAPGYTMVREIGVMGSHGPGGHCELKFENVRVP 227

Query: 298 L---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
               LG +       ++      L   +  +   R S+  A  YA +R V G  L D   
Sbjct: 228 ESAILGRVGEGFKWSQERLGPARLTHCMRWIGLARRSMEIAREYALKREVFGQKLADHQG 287

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++   A+ AL+I +   L+ + A++    +        AR +  + K+   +     +  
Sbjct: 288 IQWMFAESALEIESGYMLTLKAAHTLRAGED-------ARQIISMAKWQVSETLCKTVDR 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           A++  G  GY  +  +   YR++ A  I  G      + +   L  G + F
Sbjct: 341 AIQICGSHGYGRDMKLELFYRDARAARIADGPTEVHKMVIGRNLISGKSDF 391


>gi|315050013|ref|XP_003174381.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
 gi|311342348|gb|EFR01551.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS
           118893]
          Length = 441

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 81/473 (17%), Positives = 153/473 (32%), Gaps = 47/473 (9%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
              N P        +S    L  L + + +  H+  +          L   A E  R   
Sbjct: 1   MGTNSPNPI----PFSEPPYLCGLPSPYYTESHRRFQKACRAFIWEHLHSHAMEWEREGT 56

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIR 136
                   +G        +        L +  IHD  G+    WD  +  +   +  +  
Sbjct: 57  VPPHVFEVFGKHNMLLPNLPSPLPVAWLKKLGIHDILGVKVEDWDLIYTGIYLDEMSRCG 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
            +             + P +                       SRE        M    V
Sbjct: 117 LSGPPTSLTAGFAFGIPPMLAFG--------------------SRELQEKFLPDMLTAKV 156

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
              + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G  G 
Sbjct: 157 RSCIAITEPDAGSDVANITTTAEKSADGKHYIINGEKKWITNGIWSDYTTMAVRTGGPGP 216

Query: 256 FLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
             +  ++       G+  +RL    G     T  +E  N       L+G        +  
Sbjct: 217 AGLSMIVVPLKGYPGVTMRRLPVS-GQVCGGTTYIELDNVKVPVENLIGQEGHGMKYIMT 275

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  A+      RV+L+ A+ Y  +R   G  L+DQPV++  ++    ++ +  A
Sbjct: 276 NFNHERLTIAVGVTRQARVALSAAVEYCMKREAFGKTLMDQPVVRHRLSKAGAELESMWA 335

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ER 428
              +          ++E       +  + K     +       A+   GG G+ +     
Sbjct: 336 WVEQFLYQMSH-MPKAEGDRKLGGLTALAKAKAGMVLNECAQVAVLLFGGLGFTKSGQGE 394

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481
            + +  R+ P   I  GS + ++   +  L K        F    + LG + K
Sbjct: 395 LVEKILRDVPGARIPGGSEDVLLDLAVRQLVKN-------FKAEAKKLGPAAK 440


>gi|238508355|ref|XP_002385373.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220688892|gb|EED45244.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 441

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 83/470 (17%), Positives = 162/470 (34%), Gaps = 49/470 (10%)

Query: 25  LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMANY 79
            N P        +S    L  L + + +  H   +      L E ++S  A E  +  + 
Sbjct: 4   TNSPNPI----PFSEPPYLRNLPSPYYTEGHLRFQKACRAFLWENLISH-AAEWEKEGHV 58

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRA 137
                  +         +        L R  IHD  G+    WD  +  +   +  +   
Sbjct: 59  PEHVFETFCKHNMLLPNLPAPLPVDWLKRLGIHDILGVRVEDWDYLYTGIYCDEMARSGL 118

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A             + P +                    K  SRE        M      
Sbjct: 119 AGPGTSLSAGFAFGIPPVL--------------------KYASRELQERVLPDMLTGRKR 158

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
             + +TE   G+D+A IT+   K +DG  Y ++G K ++++ +   +  +A   G  G  
Sbjct: 159 TCIAITEPEAGSDVANITTTATKSADGKFYIINGAKKWITNGIWSDYTTMAVRTGGPGAS 218

Query: 257 LVP-RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312
            +   ++      G+  +R+ +  G ++  T  +E  +     G L+G        +   
Sbjct: 219 GLSVMVVPLKGYPGVTMRRI-HVSGTKTAGTTYIELDDVKVPVGNLIGREGDGMRTIMTN 277

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                L  A+      RV+L+ A  Y  +R   G  L+DQPV++  +A    ++   +A 
Sbjct: 278 FNHERLTIAVQCTRQARVALSSAFGYCLKREAFGKTLMDQPVVRHRLAKAGAELETVSAW 337

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERS 429
             ++     + + + E       +  + K     +       A+   GG+G     +   
Sbjct: 338 IEQILYQLCKLE-KVEADRLLGGVTALAKAKAAMVLNECAQCAVLLFGGAGLTQSGQGEI 396

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
           +    R+ P + I  GS + ++   +  L K       ++ T E+ LG +
Sbjct: 397 VEAIMRDVPVSRIPGGSEDVLLDLSVRQLVK-------IYQTQEKKLGQA 439


>gi|225679594|gb|EEH17878.1| medium-chain specific acyl-CoA dehydrogenase [Paracoccidioides
           brasiliensis Pb03]
          Length = 438

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/439 (17%), Positives = 150/439 (34%), Gaps = 36/439 (8%)

Query: 36  AYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
            +S    L  L + + +  H+  +          L+  A E  R           +    
Sbjct: 10  PFSEPPYLCGLPSPYYTEAHRTFQKACRAFMWKNLTSHAFEWEREGTVPEHVWQTFAKHN 69

Query: 92  ERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +        L +  I+D  G+    WD  +  +   +  +   +           
Sbjct: 70  MLVPNLPSPLPVVWLKKLGINDILGVKVEDWDLIYTGIYLDEMRRSGLSGPSSSLSAGMA 129

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + + P       V    +P + + + P + +                   + +TE   G+
Sbjct: 130 YGVPP-------VLKFGSPELQERFLPDLLTC-------------KKRTCIAITEPDAGS 169

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           D+A IT++  K +DG  Y ++G K ++++ +   +  +A   G  G   +  ++    + 
Sbjct: 170 DVANITTRATKSADGKHYIINGSKKWITNGIWADYTTMAVRTGGPGPSGLSIMVVPLKNY 229

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G+  +R     G   + T  +E  +       L+G   +    +        L   I  
Sbjct: 230 HGVTMRRFSVT-GQACSGTTFIELDDVKVPVENLIGQEGMGMKYIMTNFNHERLTITIAV 288

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ A  A   +     +   
Sbjct: 289 TRQARVALSAAFEYCLKREAFGKTLMDQPVVRHRLAKAGAELEAMWAWVEQFLYQLNN-M 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANS 441
           S+ +       +  + K     +       A+   GGSG           R YRE P   
Sbjct: 348 SKDQADFRLGGLTALAKAKAGMVLNECAQVAVLLFGGSGLTRTGQGEIAERIYREVPGAR 407

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  GS + ++   +  L K
Sbjct: 408 IPGGSEDVLLDLSVRQLVK 426


>gi|319762952|ref|YP_004126889.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330825032|ref|YP_004388335.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317117513|gb|ADV00002.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329310404|gb|AEB84819.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 409

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 16/283 (5%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMS 240
                  AP+ +   AI   LTE   G+D  A+ ++  +  D  Y L G K F+S  P +
Sbjct: 132 WQMEQFIAPVARADKAICFALTEAGAGSDAGALQTRATQDGDH-YVLHGRKRFISGSPFA 190

Query: 241 DAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF- 297
           D  ++LA           +     D    G+        + G   + T ++         
Sbjct: 191 DCAVLLASTAPEGAAEREISAFFVDLHAPGVEVVSGYKTMAGQ--SHTGDIVLDGARVPA 248

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G+             +  L      +   +V+L +A  YA  R   G  +     +
Sbjct: 249 AQLIGERGRGLALALGRITVNRLMHCPAMLGLAQVALRDARDYALERRQFGRSIAQFQAI 308

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +AD+A   AAA AL  + A + D           AR  A ++K +C + A  +   A
Sbjct: 309 QHMLADMATQWAAARALMVQTARAIDAGID-------ARAQASMSKLFCSEAAFGIADRA 361

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           ++  GG G ++ R +   +R      +L G+       +   L
Sbjct: 362 VQIHGGEGIVQGRRVEFLFRMLRMYRVLTGTSEIQRNTIAREL 404


>gi|242075034|ref|XP_002447453.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
 gi|241938636|gb|EES11781.1| hypothetical protein SORBIDRAFT_06g001260 [Sorghum bicolor]
          Length = 418

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 126/367 (34%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+  +F      L+ +    G    I      P + + A+ +  + +  +    A   + 
Sbjct: 66  WETAQFP---FHLIPKLGSLGFLGGIIKGHGCPGLSETAYAVCISEVARVDASIASFCLV 122

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A M +    + + P +              K        LTE   G+D ++
Sbjct: 123 QSCLAMLCIAQMGSEAQKEKYLPLL-------------SKQQKVCAYALTEPDYGSDASS 169

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  +K+  G       +W  +S  +D  ++LA+         V   + +G  +GL   
Sbjct: 170 LNTVARKVPGGWVLNGRKRWPGNSSFADVLVVLAR---NTSTNQVNGFIVNGGSSGLKIN 226

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVS 331
           +++NK+  R     +++  + F      L  +    + +       + +A +S+      
Sbjct: 227 KIENKVSMRMVQNCDIQLDDVFVPDDDRLPGANSFQDLVDSLSFSRVMAAWVSIGIAEGV 286

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R   G  L    + +  +  +  +I A   L +RL          +    
Sbjct: 287 YDACHRYLGERKQFGVPLATFQLNQEKLVRMLGNIQAMWLLGWRLCKLHASGNITT---- 342

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W  K A   +A   E +GG+G + +  + +   +        GS +   
Sbjct: 343 ---GHASLGKAWITKQARETVALGRELLGGNGIVTDFHVGKALCDMETVYTYEGSYDVNA 399

Query: 452 LDVLNLL 458
           L V   +
Sbjct: 400 LIVAREI 406


>gi|148257884|ref|YP_001242469.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410057|gb|ABQ38563.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 388

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 129/387 (33%), Gaps = 51/387 (13%)

Query: 83  QLHAYGPGGERWDKVEF----HPA--WHALLRRSI----------HDGLHCSIWDRSFEP 126
           + H +    +  D V       P   W  L R               G    +    +  
Sbjct: 3   EQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEYGG 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
              K +           A    G      + +   V    +      W PK+ S E    
Sbjct: 63  AGLKLSAAAAILEEIQRAGCN-GGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELR-- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                         G+TE   GTD +++ +  ++  D  Y ++G K + S +  SD  I+
Sbjct: 120 ----------LQAFGVTEPTSGTDTSSLKTFAKRDGD-SYIVNGQKIWTSRAEYSDLMIL 168

Query: 246 LAQVEGR----VGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           LA+   +         +   + D       GL  + ++  + N +  T E+ F++     
Sbjct: 169 LARTTPKDQAQKRTDGLSVFIVDMREAKKAGLTIRPIRTMM-NHA--TTEVFFTDMRVPA 225

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G+       +        +  A   V   +  +A+A +YA+ R V G  +     +
Sbjct: 226 ENLIGEEGKGFRYILSGMNAERILIAAECVGDAKWFIAKATNYAKERVVFGRPIGQNQGI 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA  +       ++  +    EA  A+++A          +       
Sbjct: 286 QFPIAKAYASMRAAELMVKEATRKYEAGQDCGAEANMAKMLAA-------DASFEAANAC 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSI 442
           ++  GG G+ EE  + R +RE+    +
Sbjct: 339 IQTHGGFGFAEEYDVERKFRETRLYQV 365


>gi|261418207|ref|YP_003251889.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|319767833|ref|YP_004133334.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
 gi|261374664|gb|ACX77407.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61]
 gi|317112699|gb|ADU95191.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp.
           Y412MC52]
          Length = 404

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 115/335 (34%), Gaps = 36/335 (10%)

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA             +         +    TP   + +       E              
Sbjct: 85  AAEELAWGCPGIALSLPGPGLGGPPIQSSGTPEQKQRFLSIFTKEEPR------------ 132

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
                LTE   G+D + I +  +K+ DG Y L+G K F+++   +   ++ A V+ ++G 
Sbjct: 133 WGAYALTEPEAGSDASGIRTTAKKV-DGGYVLNGQKIFITNGARASWVVVFATVDPKLGR 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--------- 306
                 + +    G    R  +K+G R+N T EL F + F      L             
Sbjct: 192 AGHRAFVVEKGTPGFVATRTVHKMGLRANETAELLFEDCFVPDENLLGGEELYSANANKP 251

Query: 307 -GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK         A M+V   R +    +   R  +   G L  +     A A+  
Sbjct: 252 SGFQVAMKTFDSTRPIVAAMAVGIARAAYEYTLDIVRSEYPKQGRLYYEAAALLAEAEQ- 310

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L++  A   D  +  + EAA       + K    KMA  V A  +E +G  G
Sbjct: 311 -EIDAARLLTWEAAWKADIGEPNAMEAA-------VCKAVAGKMALHVCAMCLELLGPVG 362

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++   + + YR+     I  G+     L     L
Sbjct: 363 -LDGHLVEKLYRDVKVFDIFEGTQQIQRLVTARRL 396


>gi|159897487|ref|YP_001543734.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890526|gb|ABX03606.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 423

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 121/354 (34%), Gaps = 51/354 (14%)

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +                        + VA   T      +  +    E           
Sbjct: 83  MVHLIEALSWGDAGMYLTTPGGALGGAAVAAAGTNDQKNRFLARFGESE----------- 131

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP------MSDAFIMLA 247
           T V   + +TE + G+D +AI +   +  D  + L+G K + +             ++ A
Sbjct: 132 TPVWGSMAMTEPQAGSDTSAIRTTAVRDGD-SWILNGEKIYCTGGRLSLEESQGLVVVWA 190

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---- 303
            V+ ++G   +   + +    G+   +L++K+G R++ T  + F++        L     
Sbjct: 191 TVDPKLGRAGMKAFVVEAGTPGMQVTKLEHKMGIRASDTAAVVFTDCRIPFDNVLGNPEI 250

Query: 304 -----------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--GGILI 350
                         G    MK     D+   +V+   + +A A     R  +S  G  + 
Sbjct: 251 PKAEATAASADAPKGFKGAMKTF---DATRPAVAASALGIARAALELLREQLSLAGIPIR 307

Query: 351 D------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
           D         ++R + ++     AA  L+ + A   D  ++ + E       A   K   
Sbjct: 308 DDVPVNEMSAIERDVLELEAQHKAAWLLTLKAAWMMDSGEANTVE-------ASACKVKA 360

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + A  +  +A+E +G  GY  E    +  R++  N I  G+G    L +   +
Sbjct: 361 GEAATVITQKAVELLGPLGYTRELLAEKWMRDAKINDIFEGTGQINRLIIARRI 414


>gi|226492968|ref|NP_001148492.1| glutaryl-CoA dehydrogenase [Zea mays]
 gi|195619782|gb|ACG31721.1| glutaryl-CoA dehydrogenase [Zea mays]
          Length = 433

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 130/368 (35%), Gaps = 30/368 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF   +HA+   +   GL          P +   A  I  A +  +    +  ++ 
Sbjct: 77  WEKAEFP--FHAIPSLA-SLGLAGGTIKGYGCPGLSLTASAISIAEVARVDASCSTFILV 133

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  + S +AL  +    + + P +              +        LTE   G+D ++
Sbjct: 134 HSSLAMSTIALCGSEAQKQKYLPSLT-------------QFKTIGCWALTEPDYGSDASS 180

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +S  +D  I+LA+             +      GL   
Sbjct: 181 LRTAATKVPGGWHLDGQKRWIGNSTFADVLIILARNADTNQLNG---FIVKKGAPGLKAT 237

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVS 331
           +++NKIG R     ++  +  F      L       +  K+  +  +  A   +      
Sbjct: 238 KIENKIGLRMVQNGDIILNKVFVPEEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGV 297

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +  +  +I A   + +RL   ++  K       
Sbjct: 298 YDICHRYLKERKQFGAPLAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK------- 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                + + K W  K A  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 351 MTPGRSSLGKAWTSKKAREVVSLGRELLGGNGILVDFLVAKAFCDVEPIFS-YEGTYDIN 409

Query: 451 VLDVLNLL 458
            L     +
Sbjct: 410 SLVAGREI 417


>gi|257063646|ref|YP_003143318.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
 gi|256791299|gb|ACV21969.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
          Length = 398

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 122/372 (32%), Gaps = 27/372 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMV 162
                 +I + L+       +      +   +R    +         HL   +  +  ++
Sbjct: 42  QEFYDLAIKNDLYRFYLPAEYGGWNLNELEILRVQEEFSRGPGGMRMHLHHAADMNWRIL 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
                P +   +  K              Q  ++     +TE+ GGT  A + +   K  
Sbjct: 102 DDYGKPELKAKYMDKF-------------QDKTIYCNFAITEQTGGTG-ADLHTTALKNE 147

Query: 223 DGIYCLSGHKWFLSSPMSDAFI-MLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G Y L+G KW +S      F  ++A  +        +          G     + + +G
Sbjct: 148 KGNYVLNGEKWLISHTDCSDFTYVIAVTDPESDKDSRLSAFFVPNDAPGFEIVEMPHMMG 207

Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R      L+F+N      +LLG+             +  +  A+ ++   +  L   + 
Sbjct: 208 CRGAGHAGLKFNNVELEPIYLLGEEGQGMEVAIHSLSVSRVHIAMSNLGMAQRMLEITLK 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
            A  R   G  +  + ++K  IA +   I       +  A  +D     +E   Y    A
Sbjct: 268 RANDRITFGKPIASRQMIKEKIARMQAHIHTLRCAIYDFARDYDI-DPYNE---YVTEKA 323

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLDV 454
            I K    +    V  E +E  GG GY E+       R YR+  A  +  G+ N   + +
Sbjct: 324 AICKLVSIETVKEVSDEMLEIFGGDGYFEDSPYGPTERLYRDCRAMWLEEGAPNVQKITI 383

Query: 455 LNLLEKGTNLFE 466
               +K   + +
Sbjct: 384 ARECQKFGGVVK 395


>gi|227832461|ref|YP_002834168.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183674|ref|ZP_06043095.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453477|gb|ACP32230.1| acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC 700975]
          Length = 393

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 122/377 (32%), Gaps = 34/377 (9%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--A 148
           G+ ++      +   +L  +   G+H   +         + A +   A   L A      
Sbjct: 35  GQWYEDAVLPESIFPVLAEAGLFGMHLEGY-----GCAGRSAVEYGLAMQELEAGDSGIR 89

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             +      + S +    +    + W P++ + E             +    GLTE   G
Sbjct: 90  TVVSVQGSLAMSAIYKHGSEEQKQQWLPQMAAGE-------------IIGCFGLTEPTAG 136

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPR----LLE 263
           +D A + +  +  S         +W   + ++   I+ A+V E       V       + 
Sbjct: 137 SDPAGMATMARYRSGEWVLDGAKRWIGLASVAGVAIIWAKVSEEDAATAGVEAGVRGFIV 196

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSA 321
             S  G     +  K+  R++   ++E           L    G       L       +
Sbjct: 197 PTSTPGFKATPITRKLSMRASIQCDIELEGVAVPGDALLPKHPGLKGPFMCLNEARFGIS 256

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++   R SL  A+ YA+ R      L    + ++ + D+A+++     L+  L  + D
Sbjct: 257 FGALGAARDSLEVALEYAKERKQFDRSLASFQLTQQKLVDMAVELNKGQLLALNLGRAKD 316

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                            + K   C+ A  +  +A   +GG+G   + S  RH     +  
Sbjct: 317 AG-------TLEPYQISVGKLANCRTAIEICRQARTILGGNGITADFSPLRHAANLESVR 369

Query: 442 ILLGSGNAMVLDVLNLL 458
              G+     L +  +L
Sbjct: 370 TYEGTDEIHTLILGRVL 386


>gi|212533107|ref|XP_002146710.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210072074|gb|EEA26163.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 400

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/368 (20%), Positives = 124/368 (33%), Gaps = 37/368 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQ 145
              D+ E  P           DG                    I  A L +       A 
Sbjct: 30  RECDQEERDP--KEFHAALAKDGWLGIALPEELGGSGL----GISEATLMMQTISQSGAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V +   +A   T    +   P I +  +                 G+TE 
Sbjct: 84  MAGAQSIHANVYATQPLAKFGTKEQVQKLIPNIINGTWR-------------TCFGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCFLVPR 260
             G D   + +   K SD  Y +SG K W   S ++   I+LA+     E +     +  
Sbjct: 131 NTGLDTLKLKTTATKNSDNTYLVSGQKVWITCSQVASVMILLARTMSLEETQRPTEGLSM 190

Query: 261 LLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D    GL  +R+K K+G R+    E+ F N       L+G  N     +      
Sbjct: 191 FAINLDRKNPGLELKRIK-KMGGRAVDANEVFFDNYEIPADTLVGKANDGFKIILHGMNA 249

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++     +L +A  YA+ R V G  +     +   +AD  + + AA   ++ 
Sbjct: 250 ERCLLAGEALGLGYAALEKASLYAKERQVFGRPIGKNQAIAHPLADAYMRLEAAKLATYH 309

Query: 376 LANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A  +D +K+ S  ++ A   A    KY   + A      A+   GG GY  E  + R  
Sbjct: 310 AARMYDASKTDSSISSQAVGTACNSAKYLAAEAAYTACERAVMTHGGMGYAVEYDVERWL 369

Query: 435 RESPANSI 442
           RE     I
Sbjct: 370 RECFVPRI 377


>gi|269125034|ref|YP_003298404.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268309992|gb|ACY96366.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 419

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 71/434 (16%), Positives = 134/434 (30%), Gaps = 40/434 (9%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +     LV L+A+    + +E++ L          +  R  ++           G    +
Sbjct: 3   FELPERLVRLLADLDDFIEREIKPL------QEQDDNERFFDHRREYARTDFDNGG-VPR 55

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQLEAG 149
            E+      + RR+   G       +                 H  R   L L   L+  
Sbjct: 56  REWEELLEEMFRRADAAGWLRYGLPKEAGGSGGSNLDMAVIREHLARK-GLGLHNDLQNE 114

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +   A M+    TP   +++               PM      IG GLTE   G+
Sbjct: 115 ASVVGNFPFAHMLLEFGTPEQIEEFLE-------------PMLARKKRIGFGLTEPDHGS 161

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSP 267
           D   + +   +  D  + ++G K F S   S    ++ A+  G+ G    +   +     
Sbjct: 162 DATWMETTAVRDGDD-WIINGVKRFNSGMHSATHDVVFARTSGKPGDAGGITAFIVPTDA 220

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL        + N      E+   +       +LG+        +       +  A  S
Sbjct: 221 PGLTVDFHWWTL-NMPTDHAEVTLRDVRVPNSAILGEEGEGLAVAQAFVHENRIRQAASS 279

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   +  +  ++ YA +R   G  L  +  ++  + ++  +      L  + A   D   
Sbjct: 280 LGAGQYCIDRSVEYALQRKTFGQPLATRQAIQWPLVELQTEAEMLRWLIRKTAWDLDR-V 338

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              E +    +       + C+ A      AM+  GG GY         YR      I  
Sbjct: 339 PHLEISDKVSMCNYRANRFVCEAA----DRAMQIHGGLGYTRHTPFEHIYRHHRRYRITE 394

Query: 445 GSGNAMVLDVLNLL 458
           G+    +  V   L
Sbjct: 395 GAEEIQMRKVAGYL 408


>gi|118468947|ref|YP_885076.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170234|gb|ABK71130.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
          Length = 392

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 141/407 (34%), Gaps = 26/407 (6%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
           Y LS     +   A+     L  Y    E             L  R+I  GL+ +   +S
Sbjct: 2   YGLSDEDLRIRDTASAFAESLMPYEAEAEAAGGKMPKELTEKLQARAIELGLYATNIPKS 61

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                             L   L    +   +   A ++    TP     W   + +   
Sbjct: 62  AGGPGCTA----------LQQVLVQEQVGRVTNGLAWVMH---TPPQ---WWVDVATDHQ 105

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA 242
                 P  +        +TE+  G+D++ + +  ++  D  Y ++  KW ++S  ++D 
Sbjct: 106 LQRWLLPTVRGEKHEAYAITEEFAGSDVSDLAATARREGDE-YVINAVKWHVTSFNLADY 164

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
             + A +E          L+ D    G+   R      + ++    + F++       L+
Sbjct: 165 VFVQAVLENGDHAGDHVLLVVDLPSPGIEVVRTPQYSHHIADEHPIVAFADVRVPTTHLV 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G         +D      L  A   V   +  L E   +A+ R V G  L +  ++   +
Sbjct: 225 GAEGQGMTFTQDWFRFERLMVAARCVGAAQRLLDETTAFAQTRIVDGKPLGNHQLVAGML 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD A ++ AA  + + +A S D    R          A + K +C +MA      A++  
Sbjct: 285 ADSATELFAARTMLYEVARSIDAGLDRKT----LHGQASMAKLYCSEMAGRAADRAVQVF 340

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLF 465
           GG GY+ E    R +RE     I  G+     L V   L+ +G    
Sbjct: 341 GGRGYMRENVAERMFRELRVERIWEGASEIQRLIVARQLMNRGPQAL 387


>gi|115434652|ref|NP_001042084.1| Os01g0159400 [Oryza sativa Japonica Group]
 gi|54290198|dbj|BAD61086.1| putative glutaryl-CoA dehydrogenase [Oryza sativa Japonica Group]
 gi|113531615|dbj|BAF03998.1| Os01g0159400 [Oryza sativa Japonica Group]
 gi|125524516|gb|EAY72630.1| hypothetical protein OsI_00496 [Oryza sativa Indica Group]
 gi|125569115|gb|EAZ10630.1| hypothetical protein OsJ_00462 [Oryza sativa Japonica Group]
 gi|215713513|dbj|BAG94650.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 433

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 134/368 (36%), Gaps = 30/368 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF   +HA+ + S   G+          P +   A  I  A +  +    +  ++ 
Sbjct: 77  WEKAEFP--FHAIPKLS-SLGVAGGTIKGYGCPGLSITASAITMAEIARVDASCSTFILV 133

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +AL  +    + + P +              + +      LTE   G+D ++
Sbjct: 134 HSSLAMVTIALCGSEVQKQKYLPSL-------------AQLTAVGCWALTEPNHGSDASS 180

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +S  +D  ++LA+             +      GL   
Sbjct: 181 LITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNG---FIVRKGAPGLKAT 237

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++ F+  F      L       +  K+L    +  A   +      
Sbjct: 238 KIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVNSFQDISKVLAISRVMVAWQPIGISMGV 297

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L+   + +  +  +  +I A   + +RL   ++  K       
Sbjct: 298 FDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK------- 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                A + K W  +MA  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 351 MTPGHASLGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAFCDLEPIYS-YEGTYDIN 409

Query: 451 VLDVLNLL 458
            L     +
Sbjct: 410 SLVTGREI 417


>gi|46138871|ref|XP_391126.1| hypothetical protein FG10950.1 [Gibberella zeae PH-1]
          Length = 425

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 134/368 (36%), Gaps = 37/368 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P            G        S           I  A + +    E+G  
Sbjct: 55  QEHDQNEQDP--KEFHTALAKAGWLGIALPESLGGSGL----GISEAAMMMQTIAESGAG 108

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   T    +   PKI S +Y              +  G+TE 
Sbjct: 109 MAGAQSIHANVYATQPLAKFGTKEQLEMTIPKIISGDYR-------------VCFGVTEP 155

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPR 260
             G D   + +  ++ SDG Y ++G K +++ + ++   I+LA+       +     +  
Sbjct: 156 NSGLDTLRLETTAKQNSDGSYSVTGQKIWITCAQVASKMILLARTTPLDQVKKSSEGLSL 215

Query: 261 LLE--DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D +  GL  +++K K+G R+    E+ F N       L+G+ N     +      
Sbjct: 216 FCIHLDRTQPGLTMRKIK-KMGGRAVDANEVFFDNYQIPSSSLIGEQNKGFKMILHGMNA 274

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++     +LA+A  YAR R V    +     +   +AD  + +  A   ++ 
Sbjct: 275 ERCLLAGEALGLGYAALAKASGYARERVVFKRPIGMNQAIAHPLADAYMKLEGAKLATYH 334

Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A  +D++K+  S       + A   KY   + A      A+   GG GY  E  + R +
Sbjct: 335 AARLYDQSKTDASVRQDDIGVAANSAKYMAAEAAFTACERAVLTYGGMGYAMEYDVERWF 394

Query: 435 RESPANSI 442
           RE     I
Sbjct: 395 RECLVPRI 402


>gi|258650302|ref|YP_003199458.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258553527|gb|ACV76469.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 399

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 116/369 (31%), Gaps = 29/369 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           + WD+ E+      L RR     L            +   A  +    +          +
Sbjct: 51  QAWDQGEYP---LHLARRLGELDLLTDGVVGPGLTPMSPLAAGLVNMEISRGDGSMGTVI 107

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 +   +AL  +      W               P+ +        LTE   G+D 
Sbjct: 108 AVQGGLALRSIALFGSAEQQARWL-------------VPLARGEKLGAFALTEPTHGSDS 154

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            A+ +   +  DG       +W  +  + D  ++ A+ E       V   L +    G  
Sbjct: 155 VALETTAVRDGDGWVINGCKRWIGNGSVGDVTVVWARDE----QGHVRGFLVEQDTPGYR 210

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            + ++ K   R+     +  ++    L   L  +    +  ++L    L  A  ++    
Sbjct: 211 GETIRGKASLRAIHQAHITLTDVRVPLDAVLPGTHSFKDASRVLLATRLGVAWAALGHAT 270

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+ Y+R R   G  L    +++  +  +   +         LA           +
Sbjct: 271 AVFEAALTYSRTRIQFGKPLASFQLVQERLTRMLATLTTMQLTCRHLAALDQAGTLTPTQ 330

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           AA A       KY   + A  + A A + +GG+G + E  + RH  +  +     G+ + 
Sbjct: 331 AALA-------KYTNTRGARELAAIARDMLGGNGILLENHVIRHMADVESLHTYEGTESI 383

Query: 450 MVLDVLNLL 458
             L +   L
Sbjct: 384 QALLIGRDL 392


>gi|297204581|ref|ZP_06921978.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197710648|gb|EDY54682.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 383

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 126/373 (33%), Gaps = 28/373 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            ++WD+    P    L R     G     +              I  A     A  +   
Sbjct: 29  AKQWDEEGVVP--PELFRGMAELGWFSLPFAEDEGGDGGGPLELILIAEELGRASFDVAM 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                +     V    +         ++ +  +              + +GL+E   G+D
Sbjct: 87  CYIGVLIPGITVFRWGSEAQRDFIREQVMTGRHR-------------LAVGLSEPDSGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGR-VGCFLVPRLLEDGSPN 268
            AA+ +  +   D         W     + D  I    +   R      +  LL D + +
Sbjct: 134 AAALRTTAEDHGDNFLVRGQKAWCTGGGLPDTTIATYVRTGPREPKHGGISLLLVDPATD 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---V 325
           G+  +R    +      T E+ F++        +       + M   I L+  I+S   +
Sbjct: 194 GVEVRRTPT-LARHILGTNEVFFNDALVPKENLVGPRDEGWKVMLSNIELEKVIISGGYL 252

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L E + YAR RH  G  + +   +  A+AD+  +I +A  L++R A    + K 
Sbjct: 253 GAAQATLDEMLDYARNRHAFGRPIGNFQALAHAMADLQTEIDSARLLAYRAAWLLAQGKP 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E + A++    T     ++   V A       G G+  E  ++  YRES   +I  G
Sbjct: 313 CTREGSMAKLKGSETYVAAARLGMQVCA-------GHGFSTESVMSFRYRESIVATISGG 365

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 366 TSQIQRNGIARSM 378


>gi|114761464|ref|ZP_01441379.1| FadE12_1 [Pelagibaca bermudensis HTCC2601]
 gi|114545712|gb|EAU48714.1| FadE12_1 [Roseovarius sp. HTCC2601]
          Length = 386

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 121/359 (33%), Gaps = 31/359 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGH 150
            + DK + +P            G    +    +  +        I    L       A  
Sbjct: 28  RKMDKTKEYP--WDFKDALAQGGWLGILMPEEYGGMGLGLTECGIVLDELGQKCGFNANS 85

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           +    V     V    +P + +++ PK+ S E               +  G++E   G D
Sbjct: 86  VFQYYVFPPGPVIHHGSPEMKQEFLPKLASGEEM-------------MCFGVSEPDNGVD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLED-GS 266
            + + +  +K  +         W  ++  +D  ++L +   R        +   L     
Sbjct: 133 TSRLKTFAKKDGNRYLVNGRKVWISNALNADRILLLTRTSPRNPERPFDGMTLFLSRLKD 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIM 323
             G+   R+ +KI   +  + E+ F +   F    +G+       + D      +  A  
Sbjct: 193 KKGVQINRI-DKIMRNAVDSNEIVFEDFEVFEDEIVGEEGKGFRCLIDGLNPERIAVAQT 251

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +   R +L  A+ YA+ R V    +     +   +AD  + + AA  ++ + A  FDE 
Sbjct: 252 CIGLGRGALNLAVQYAKDRIVFDRPIGKNQAVAHPLADAWMRLEAADLVTQKAARLFDEG 311

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +S   EA  A+ +A                 AM+  GG     E  ++R + E+    I
Sbjct: 312 RSCGPEANAAKYLA-------SDAGFEAADRAMQFHGGFSMSTEYHVSRFWMEARHLKI 363


>gi|15600187|ref|NP_253681.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|107104094|ref|ZP_01368012.1| hypothetical protein PaerPA_01005167 [Pseudomonas aeruginosa PACS2]
 gi|116053142|ref|YP_793463.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894091|ref|YP_002442960.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254238294|ref|ZP_04931617.1| hypothetical protein PACG_04425 [Pseudomonas aeruginosa C3719]
 gi|254244120|ref|ZP_04937442.1| hypothetical protein PA2G_04958 [Pseudomonas aeruginosa 2192]
 gi|296391837|ref|ZP_06881312.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313110027|ref|ZP_07795931.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9951279|gb|AAG08379.1|AE004912_5 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115588363|gb|ABJ14378.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170225|gb|EAZ55736.1| hypothetical protein PACG_04425 [Pseudomonas aeruginosa C3719]
 gi|126197498|gb|EAZ61561.1| hypothetical protein PA2G_04958 [Pseudomonas aeruginosa 2192]
 gi|218774319|emb|CAW30136.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310882433|gb|EFQ41027.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 402

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   +  D  Y L+G K F++S   +DA ++ A +   
Sbjct: 126 GGTWAAMAITEPGCGSDSAAIRTTATQDGDH-YVLNGEKIFVTSGERADAVVVWATLNRN 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   + +    G+   RL+ K+G +++ T  + F++        L  +   V+  
Sbjct: 185 LGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKG 244

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA---------D 361
              ++   D+    V+GM V +A+A    R R +           K  +           
Sbjct: 245 FAGVMETFDNTRPLVAGMAVGVAKAALD-RTRELLKKAGCKFDYRKPLLTVSHAEATLYR 303

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +  AA  L+ + A   D     S+E       A I K    ++A  +  + +E  G 
Sbjct: 304 LEAEWEAARLLTLKAAWMADNKLPNSKE-------ASIAKAKAGRVANEITLKCVELAGA 356

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY E+  + +  R+S    I  G+    +L V   L
Sbjct: 357 LGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRL 393


>gi|168038304|ref|XP_001771641.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677080|gb|EDQ63555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 483

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 107/315 (33%), Gaps = 27/315 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  S    + +A++ +      + P +              +  +     LTE   G
Sbjct: 166 TFVLVHSSLCMATLAMLGSEEQKLKYLPGL-------------ARLDLIGCWALTEPGYG 212

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +++ +  +K+  G       +W  ++  +D  ++ A+         +   +      
Sbjct: 213 SDASSLNTTAKKVEGGWLLNGQKRWIGNATFADVAVLFAR---NTQTNQINGFIVKKGTP 269

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           G    +++NKIG R     ++   N F      L       +  K+L    +  A   + 
Sbjct: 270 GYRATKIENKIGLRMVQNGDIVMENAFVPDKDRLPGINSFADTNKVLAVSRIMVAWQPIG 329

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                      Y   R   G  L    + +  +  +  +I A   L +RL   ++  K  
Sbjct: 330 IAMGVYDICHRYLLERKQFGAPLAALQINQEKLVRMLGNIQAMFLLGWRLCKIYEAGK-- 387

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLG 445
                     A + K W  K A   +A   E +GG+G + +  +A+ + +  P  S   G
Sbjct: 388 -----MTPGQASLCKAWNTKRARETVALGRELLGGNGILADFLVAKAFCDLEPIYS-YEG 441

Query: 446 SGNAMVLDVLNLLEK 460
           +     L     + K
Sbjct: 442 TYEINALVTGREITK 456


>gi|257791581|ref|YP_003182187.1| crotonobetainyl-CoA dehydrogenase [Eggerthella lenta DSM 2243]
 gi|317488007|ref|ZP_07946589.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325833257|ref|ZP_08165763.1| crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
 gi|257475478|gb|ACV55798.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912909|gb|EFV34436.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|325485639|gb|EGC88107.1| crotonobetainyl-CoA dehydrogenase [Eggerthella sp. HGA1]
          Length = 383

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 117/364 (32%), Gaps = 26/364 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+   +P     ++     G    +   S   +  +Q      A   ++ +  A   
Sbjct: 30  HECDEKHEYPL--RWVKGLCELGFDQIMLPESHGGLGLEQPCVTLMAVYEILGKYGAPTY 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   +     +    T    +     + S E                    TE   G+D+
Sbjct: 88  VLYQLPGFETIIREGTEEQIEAVMSTLGSGEQ-------------IWNSACTEPGAGSDV 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            A+ +  ++ +  IY      +  SS      +++A+       F       D S  G+ 
Sbjct: 135 GALATTYKRENGKIYLNGTKTFITSSAGVKYLVIMAKNADDPTMF--TEFFLDMSKPGVK 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDM--KILIYLDSAIMSVSGM 328
              L  K+G R ++  E+   N              G +  +                  
Sbjct: 193 LSPL-TKLGLRMDSCCEVYMDNVELEEKDIFGKEGNGFMRGVSDFNFERWLVGACDYGTA 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +  +A+ +A  R   G  +    + +  I D+ + +     + +  A + D      +
Sbjct: 252 ICAFEDAMAHANSRIAFGKPISRFQLNQIKITDMCIKLTNMKNMLYEAAWNADNNDGNFD 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
            AA     A + KY+C   +  V  +AM+ +GG     E  I R +R+   + +  G+  
Sbjct: 312 PAA-----AAMCKYYCANASFEVTDDAMQIMGGIAVASEHRINRIWRDLRVDRVSGGTDE 366

Query: 449 AMVL 452
            M+L
Sbjct: 367 MMIL 370


>gi|215425459|ref|ZP_03423378.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T92]
          Length = 433

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 144/355 (40%), Gaps = 46/355 (12%)

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEG------RVGCFLVPRLL-- 262
           +  + +DG + + G K F++S  S         ++LA+ EG       +  + VP+ L  
Sbjct: 1   KAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPGTKGLSLYFVPKFLFD 60

Query: 263 ----EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKI 314
               E G  NG+    +++K+G + +AT EL F        G+L+G+++     + ++  
Sbjct: 61  VETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLVGEVHNGIAQMFEVIE 120

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADI 362
              +     +++ +      A+ YA+ R                  +   P ++R++   
Sbjct: 121 QARMMVGTKAIATLSTGYLNALQYAKSRVQGADLTQMTDKTAPRVTITHHPDVRRSLMTQ 180

Query: 363 ALDIAAATALSFRLANSFDEAKS---RSEEAAYARI----MAPITKYWCCKMAPAVIAEA 415
                   AL    A   D A +      +A  A      M P+ K    + A A + E+
Sbjct: 181 KAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDLMLPVVKGVGSEQAYAKLTES 240

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLE 473
           ++ +GGSG++++  I ++ R++  +S+  G+      D     ++         +   ++
Sbjct: 241 LQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKIVRDKGVALAHVSGQIQ 300

Query: 474 Q--DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS-AAALYRAGMNDI 525
           +  D G+   ++ T          + +G+A  LT  +  A     +LY+ G+  +
Sbjct: 301 EFVDSGAGNGRLKTERALLAKALTDVQGMAAALTGYLMAAQQDVTSLYKVGLGSV 355


>gi|319653539|ref|ZP_08007638.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2]
 gi|317394738|gb|EFV75477.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2]
          Length = 537

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 97/495 (19%), Positives = 176/495 (35%), Gaps = 51/495 (10%)

Query: 32  IGMNAYSSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMAN-YNTPQLHA 86
             ++ Y  D  L   +  +       +H EL+     V S  +    R A     P L  
Sbjct: 26  SNLDWYKDDPFLQKALKKYAGSQYEQIHIELQHFSPAVSSRWSTLAERAARPEVRPYLLH 85

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCS---IWDRSFEPVVRKQAHKIRAARLYLM 143
           +     R D+V      H L +     GL  S    W+                A+  L+
Sbjct: 86  FDAFNHRIDRVIRPMETHQLEKEVFSTGLFSSKMPAWE--------------SFAKRMLI 131

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
            QL    +  P   +  ++AL+   +   +  P++   +     K  +          +T
Sbjct: 132 HQLGEAGVACPLTCTIGLIALL--EQYPNEDIPEL--EQILQHTKEGLGGDFAIGAQFMT 187

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRL 261
           E +GG+D+ A   +        Y L G+K+F S   +D  ++ A++ G  +V  F+VP  
Sbjct: 188 EIQGGSDLPANVLEAVPDG-KNYRLYGNKFFCSVAHADYSVVTAKISGTDKVSTFIVPSW 246

Query: 262 L----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILI 316
           L    E    NG    R+K K+G     T E +++    + +G            +  L 
Sbjct: 247 LPGDKEIEKRNGYEINRIKWKMGTAELPTGEFQYNGALAYPVGPAGKGVAVAVGIVLTLS 306

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI----------ADIALDI 366
            L+  I     M  +  EA  Y   R V G  + D P+  R +          A  A  I
Sbjct: 307 RLEIGIACAGFMLRAAREASLYGNFRTVFGKKVKDYPLSARTLKKIENAAHRTAAGAFKI 366

Query: 367 AAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
                L  +        D+     ++    R +  + K         V+ +A+    G G
Sbjct: 367 YDQFLLLDQPLSAGIPVDQPIELRKQLFNLRELVLLQKICATNEGAEVLRDAISVFAGHG 426

Query: 424 YIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF---EQLFSTLEQDLGSS 479
            +EE  S+ R +R+   N    G  N ++  +   +++ T+ +   + + + LE    ++
Sbjct: 427 VMEEFSSLPRIFRDIVVNEQWEGPRNLLLTQIYRDIQRVTDWYPPADFVANVLEGASQAT 486

Query: 480 GKKVITILRDSISLC 494
             +    L D +   
Sbjct: 487 IDRFAEQLTDLLQRP 501


>gi|104784423|ref|YP_610921.1| polyketide synthase [Pseudomonas entomophila L48]
 gi|95113410|emb|CAK18138.1| putative polyketide synthase [Pseudomonas entomophila L48]
          Length = 669

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/318 (19%), Positives = 114/318 (35%), Gaps = 16/318 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237
            S E        +           TE   G+D  +I +       G   L+G K W  S 
Sbjct: 102 ASEEVKQELLPALAWGRELAAFAFTEPVAGSDARSIRTTATSQGAGYQRLNGQKAWIGSG 161

Query: 238 PMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             +    + AQ     G    +   +      GL        +G R      ++F +   
Sbjct: 162 AWAGVTTVFAQQLDEAGRPSGISGYIVKAGTPGLEQGPEALTMGMRGMIQNIVDFKDAVV 221

Query: 297 ---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              +LLG  N      + + +   L  A +S+ GM+      + YA RR +S G+L+D P
Sbjct: 222 SERYLLGTRNAGMDIAQQIMMHARLGIAGLSLGGMKRCAQLMLRYAERRRISTGVLLDNP 281

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
           V +  ++D++  I A   L F +    D+     +E   A            ++      
Sbjct: 282 VTQARLSDVSAAITAVDTLVFSIGRLMDQHIGVPDEVYTACKSTAP------ELFGEATD 335

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473
              + +G  GYIE   + +  R++    I  G    M + +   + KG ++F +      
Sbjct: 336 HLTQLLGARGYIETNGVPQLLRDARILRIFEGPTETMNMYLGGRILKGADVFYRFLDETL 395

Query: 474 QDLGSSGKKVITILRDSI 491
           Q        ++ +++D+ 
Sbjct: 396 Q-----APALVRLIQDAA 408


>gi|17230170|ref|NP_486718.1| hypothetical protein alr2678 [Nostoc sp. PCC 7120]
 gi|17131771|dbj|BAB74377.1| alr2678 [Nostoc sp. PCC 7120]
          Length = 1206

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 139/395 (35%), Gaps = 30/395 (7%)

Query: 148  AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            A  +   +V     + +  T  +  +  P              +          LTE   
Sbjct: 654  ALFVGLNNVLGVRPILMYGTDALKAELLP-------------ILATGRELAAFALTETGA 700

Query: 208  GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
            G +  AI SQ     DG        W  S+  +    +  +         +   +     
Sbjct: 701  GANPQAIQSQAISDGDGWLLRGEKIWSGSAAWAGVINVFVK-----HQQGISGFVVRRGS 755

Query: 268  NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
             GL        +G R      +   +   T   +LG++       +D  +   L  A   
Sbjct: 756  PGLRQGAEALTMGMRGMVQNTVYLEDIPVTSAQVLGEVGKGMNVAQDAMMYGRLAIASAC 815

Query: 325  VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
            V GM+  +     Y++RR ++ G L+D P++   + ++   I    +L  R+    D  +
Sbjct: 816  VGGMQRCVQLMWRYSQRRQIATGKLLDHPIVLHRLQELTCAITVVQSLVMRVGKLLDAGE 875

Query: 385  SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
            +   E   A  ++    YW            ++ +GG GYIE     +  R++    I  
Sbjct: 876  TVPAEVYAACKISAPEFYW------QAADLLVQTLGGRGYIESNIAPQILRDARVLRIFE 929

Query: 445  GSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKEDKGLAR 502
            G    +   +   +L++G  L   L  TL   ++G+  +  +  +R        +  + R
Sbjct: 930  GPTETLCGFLGARVLKQGETLQNFLCQTLGAVEVGTRLRDAVDKIRGRC-FDGANITVQR 988

Query: 503  FLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537
            ++  ++   ++ A L+    +  A  ++++RF + 
Sbjct: 989  WVYHQVGKLATEAILWAVLDDKSAINWVKHRFDEQ 1023


>gi|269218882|ref|ZP_06162736.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269211993|gb|EEZ78333.1| crotonobetainyl-CoA dehydrogenase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 377

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 133/379 (35%), Gaps = 30/379 (7%)

Query: 85  HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            ++       D+   +P     ++     G    +    ++ +         AA   ++ 
Sbjct: 23  RSWEKYFHECDETSTYPL--EWVKALCDVGFDRILLPEEYDGLGLD--WVTLAAVYEVLG 78

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
           +L     +   +     VA   T    +    KIFS          +      +   +TE
Sbjct: 79  RLGGPTYILYQLPGLETVAREGTDEQRE----KIFSY---------LGTGEQVLNYAMTE 125

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+    + +   +  DG   L+GHK F +S M   ++++               L D
Sbjct: 126 PSAGSSWNDMRTTYTRR-DGKVYLNGHKTFQTSGMRVPYLVVMARNADDMDVYTE-WLVD 183

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM--KILIYLDSA 321
            S  G+  + L +K+G R ++  E+ F +              G +  +    L     A
Sbjct: 184 MSKPGIAKEPL-HKLGLRMDSCAEVYFDDVELEESDLFGSEGNGFMRGVADFDLERFLVA 242

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + +      +  +A  YA +R   G  +  + +++   AD+ + +     + F +A   D
Sbjct: 243 LTNYGQAYCAFEDAAKYANQRVQGGQAIARRQLIQLKFADMQVRLTNMRNMLFEIAWKHD 302

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K         R    + KY+C   A  V+ +A++ + G G   +  + R +R+   + 
Sbjct: 303 VGK-------LGRGDCSMAKYYCSHAAFEVVDDALQILAGVGITGDHRVQRFFRDLRVDR 355

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+   M+L       K
Sbjct: 356 ISGGTDEMMILTAGRAALK 374


>gi|239918433|ref|YP_002957991.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|281415370|ref|ZP_06247112.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239839640|gb|ACS31437.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 400

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/404 (16%), Positives = 133/404 (32%), Gaps = 33/404 (8%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+  GE           R   Y    L         WD+ E+      L+ R+    L  
Sbjct: 20  LDAFGE-ATDEDRTHWDRARAYGREVLERIDGH---WDRAEYP---LDLVARAGELDLLT 72

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +     V+   A  + A  +       A             +     P   + +   
Sbjct: 73  DGLEVPGHAVMSPLAAGLVAMEISRADGSMAAAAAVQGGLVLRALVHCAGPEQKERYL-- 130

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLS 236
                      AP+ + ++  G  LTE   G+D  ++ +  +    G + L+G  KW  +
Sbjct: 131 -----------APVARGTLPGGFALTEPLHGSDSVSLETSARPDGAGGWVLNGAKKWIGN 179

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  I+ A+             + + S  G   + +  K   R+    E+  ++   
Sbjct: 180 GAAGGITIVWARDTEDGQVKG---FVVEQSTPGYEAEVITGKGALRAIHQAEITLTDVRV 236

Query: 297 FLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L       +  ++L    ++    ++         A+ YAR+R   G  L    +
Sbjct: 237 GDDARLPGVATFKDAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLGAHQM 296

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A +  ++ A       +A      + R E+A+         KY C + A  V   
Sbjct: 297 VQERLAQMLDEVTAMQTRCVAVARLQAAGRLRDEQASLL-------KYACTRGARRVAQI 349

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A + +GG+G + E  + RH+ +  A     G+ +   L +   L
Sbjct: 350 ARDMLGGNGILLEHRVMRHFADVEALHTYEGTESVQALILGRDL 393


>gi|146338523|ref|YP_001203571.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146191329|emb|CAL75334.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 388

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 125/385 (32%), Gaps = 51/385 (13%)

Query: 85  HAYGPGGERWDKVEF----HPA--WHALLRRSI----------HDGLHCSIWDRSFEPVV 128
           H +    +  D V       P   W  L R               G    +    +    
Sbjct: 5   HQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEYGGAG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
            K +           A    G      + +   V    +      W PK+ S E      
Sbjct: 65  LKLSAAAAILEEIQRAGCN-GGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELR---- 119

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
                       G+TE   GTD  ++ +  ++  D  Y ++G K + S +  SD  I+LA
Sbjct: 120 --------LQAFGVTEPTSGTDTTSLKTVAKRDGD-SYVVNGQKIWTSRAEYSDLMILLA 170

Query: 248 QVEGR----VGCFLVPRLLEDGSPN---GLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           +   +         +   + D       GL  + ++  + N +  T E+ F++       
Sbjct: 171 RTTPKDQVQKRTEGLSVFIVDMREAKKSGLTIRPIRTMM-NHA--TTEVFFTDMRVPAEN 227

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+       +        +  A   V   +  +A+A  YA+ R V G  +     ++ 
Sbjct: 228 LIGEEGKGFRYILSGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA     + AA  +       ++       EA  A+++A          +       ++
Sbjct: 288 PIAKSYASMRAAELMVKEATRKYEAGLDCGAEANMAKMLAA-------DASFEAANACIQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG G+ EE  + R +RE+    +
Sbjct: 341 THGGFGFAEEYDVERKFRETRLYQV 365


>gi|319763608|ref|YP_004127545.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330824127|ref|YP_004387430.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118169|gb|ADV00658.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309499|gb|AEB83914.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  180 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 126/364 (34%), Gaps = 41/364 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +      G   ++  + F       A +       +         
Sbjct: 30  RKIDEARGYPE--EFVTALTKAGWLAALIPQEFGGPGLSMA-EASVIMEEINRSGGNSGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               +   + +    T    + + P+I + +                 +G+TE   G+D 
Sbjct: 87  CHGQMYVMNTIVFSGTDAQKQKYLPRIAAGDLR------------VQSMGVTEPTTGSDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG---------RVGCFLVPRL 261
             + +   K  DG + ++G K ++S    SD  I+LA+             + CF+V   
Sbjct: 135 TKLKTTAVKK-DGRWVVNGQKVWISRVQHSDLLILLARTTPVEQVQKKSDGLSCFIVE-- 191

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
           L+    NGL  + + N + N    T EL F N       LLG        + D       
Sbjct: 192 LDKAIGNGLTVRPILN-MVNH--ETNELFFDNLELPEDALLGTEGKGLKVIFDGLNAERT 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   +      L +A  YA  R V G  +     ++  +A+  +++ AA  + +R   
Sbjct: 249 LIAAECIGDGYWFLEKARDYANERKVFGRPIGQNQGIQFPLAESFIELEAANLMRWRACQ 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  ++   EA  A+ +A    +             ++  GG G+  E  + R +RE+ 
Sbjct: 309 KIDARENAGTEANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETR 361

Query: 439 ANSI 442
              +
Sbjct: 362 LYQV 365


>gi|320588850|gb|EFX01318.1| glutaryl-mitochondrial precursor [Grosmannia clavigera kw1407]
          Length = 450

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/303 (21%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-W 233
           +  S E        M +  +    GLTE   G+D  ++ +         G Y LSG K W
Sbjct: 146 EFGSEEQKERFLPAMARGELLGAFGLTEPNHGSDPGSLETTATADPTRPGYYQLSGSKTW 205

Query: 234 FLSSPMSDAFIMLAQ----VEGRVGCFLVPR-----LLEDG--SPNG-LCYQRLKNKIGN 281
             +SP++D  ++ A+      G++G    P+      L +    P G L   ++ NK G 
Sbjct: 206 ITNSPIADVLLVWAKLADPTSGKLGADGKPKKTIRGFLVERKDCPPGTLETPKIANKTGL 265

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-----GMRVSLAEAI 336
           R++ T  +            L    G          L+ A   ++      +   +A A 
Sbjct: 266 RASITGMIHLDRCPVPAANLLPHGEGLR---GPFTCLNHARYGIALGVMGALEDCIARAR 322

Query: 337 HYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
            YA  R    G  L    ++++ +AD A D A  T  + ++  + D A      A+    
Sbjct: 323 TYALERTQFRGNPLARYQLVQKKLADAATDAAYGTLAAIQVGRAKDAA--TGASASAVPD 380

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           M  + K   C  A        E  GG+   +E +I RH           G  +   L + 
Sbjct: 381 MISMVKRQNCDRALQGARVLQEIFGGNAVSDEYAIGRHVANLYVTQTYEGQSDIHSLIIG 440

Query: 456 NLL 458
             +
Sbjct: 441 RAI 443


>gi|158424133|ref|YP_001525425.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
 gi|158331022|dbj|BAF88507.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571]
          Length = 390

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 126/361 (34%), Gaps = 45/361 (12%)

Query: 103 WHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W  L R S           H G   ++   S+       +           A    G   
Sbjct: 31  WRKLDRESAYPTAFVEALTHSGFLAALIPESYGGAGLPLSAAAAILEEVQRAGCN-GGAC 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     +    T    + + PKI S E                  G+TE   GTD  
Sbjct: 90  HAQMYIMGALLRHGTGAQKETYLPKIASGELR------------LQAFGVTEPTSGTDTT 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED--- 264
           A+ +  +K  D  Y ++G K + S +  SD  ++LA+   R         +   + D   
Sbjct: 138 ALKTFAEKRGD-YYVVNGQKVWTSRAEHSDLMLLLARTTPRDQVQKRTDGLSVFIVDMRE 196

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL  + ++  + N S  T E+ F N       L+G+       +        +  A
Sbjct: 197 AKGNGLTIRPIRAMM-NHS--TTEVFFDNMKVPAENLVGEEGKGFRYILSGMNAERILIA 253

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   +  + +A  YA+ R V G  +     ++  IA     + AA  +  R A+ F+
Sbjct: 254 AECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRAAELMVHRAASLFE 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +   +EA  A+++A            A     ++  GG G+ EE  + R +RE+    
Sbjct: 314 AGQDCGQEANMAKMLAADAS-------WAAAEACVQTHGGFGFAEEYDVERKFRETRLYQ 366

Query: 442 I 442
           +
Sbjct: 367 V 367


>gi|311108067|ref|YP_003980920.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310762756|gb|ADP18205.1| acyl-CoA dehydrogenase, N-terminal domain protein 14 [Achromobacter
           xylosoxidans A8]
          Length = 391

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 130/371 (35%), Gaps = 34/371 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA---GHLMSPSVTSAS 160
            A  +     GL  +                             +      M   +    
Sbjct: 39  QACWQAICEAGLAGAALPEEHGGSGLGMVELALIVEELSAGGGGSTLGQLFMINPIFGGV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++   + ++ ++  P + S + +               + LTE   GT+  A+ S    
Sbjct: 99  PISKFGSEQMKRELLPGLTSGKIN-------------FCMALTEPDAGTNTLAMKSFAAA 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDA-FIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRL 275
             DG + L G K ++++  +    +++A+     EG      +   + D    GL Y  +
Sbjct: 146 QPDGSWRLDGRKIWITAVDAAQKMLVVARTAKPVEGARPTDGISMFIIDVEREGLTYSAI 205

Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G ++ +   + F N       L+G L+     + D+     + +    V   R++ 
Sbjct: 206 E-KVGTQTLSACSVFFDNVRIEPHELVGTLDKGFRELLDVLNTERIVTTASLVGAGRLAE 264

Query: 333 AEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
             A+ YA  R V  G  +     ++  +A    ++  A  ++   A+  D+      E  
Sbjct: 265 RLAVQYANDRKVFGGKPISAYQGLQFPLAQSHAELQCARLMNLNAASLCDQGLPYGTE-- 322

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A I K    + A   I  +M+ +GG GY  E  + R +R++            M+
Sbjct: 323 -----ANIAKLIGSQAASHAIERSMQTMGGMGYAREFHVERLWRDARLFK-FAPVSEEMI 376

Query: 452 LDVLNLLEKGT 462
           L+ + + + G 
Sbjct: 377 LNYIAIHDLGM 387


>gi|227505420|ref|ZP_03935469.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
 gi|227197963|gb|EEI78011.1| glutaryl-CoA dehydrogenase [Corynebacterium striatum ATCC 6940]
          Length = 391

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 119/340 (35%), Gaps = 33/340 (9%)

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-----SASMVALMTTPRVHKDWAPKIFSR 181
           V   ++   R A L LM    A   M   V      +   +A++ +      + P + S 
Sbjct: 70  VPGHESMTARGAGLALMEVTRADASMGTVVAVQAGLAMRSIAMLGSEEQRSRYLPAMASC 129

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        S+    GLTE   G+D  A+ +   +  D        KW  +     
Sbjct: 130 -------------SLLGAFGLTEPLHGSDSIALETTAVRDGDSWVLNGEKKWIGNGASGG 176

Query: 242 AFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
             ++ A++ +G VG F+VP         G     +  K+  R+     +   +       
Sbjct: 177 VTVIYARMEDGNVGGFIVP-----QDAPGYSATVIAGKLSLRAIHQAHIVLEDCRIPASN 231

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L       +  ++L    +  + M++         A +Y   R   G  L    ++++ 
Sbjct: 232 RLPGCQTFKDVSRVLTATRIGVSWMALGSAVACYETARNYVMERVQFGRELAKAQIIQQR 291

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A++ LD+         +A       +R E        A   K    + A  + ++A + 
Sbjct: 292 LANMVLDLNQMMLTCREVA-------AREEAGTLTPPQASAAKLHNTRAARRIASDARDM 344

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG G + E  IARH+ +  A     G+     L +  ++
Sbjct: 345 LGGVGILLENDIARHFADIEAMHTYEGTDTVQSLIMGKVI 384


>gi|94985323|ref|YP_604687.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
 gi|94555604|gb|ABF45518.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM
           11300]
          Length = 466

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/440 (16%), Positives = 143/440 (32%), Gaps = 47/440 (10%)

Query: 41  SLLVALIANFPSVVHKELELLGEY------VLSCTAQELARMANYNTPQLHAYGPGGERW 94
             L+A  +       ++L  L +        L     +  R  +  TP+         R+
Sbjct: 45  PALLAAASRLSDGQLRQLSRLLDRSTRPPRALPEPDGDFYRQLDDLTPEQQDVRLRVRRF 104

Query: 95  DKVEFHPAWHALLRR----------SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +    P  +    R               L   +W+       +  A  I         
Sbjct: 105 MEERVAPIMNEYWSRDEFPRHLIPELRQLDLPRRVWNED--GTRQPDATLIEGLITLEAC 162

Query: 145 QLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +++   A      +  + + +AL  +     +W PK+   E                  G
Sbjct: 163 RIDVSTAVFFGVHTGLAFASIALGGSAEQKAEWLPKMLDLE-------------TIGAFG 209

Query: 202 LTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
           LTE  GG+ ++  + +  Q+  D        KW  +S  SD  ++ A+    V    V  
Sbjct: 210 LTEPEGGSQVSQGMRTTCQRDGDHWILNGEKKWIGNSTFSDFTVVWAR---DVDTGEVRG 266

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVEDMKILIYL 318
            +      G   +++  KI  R      +  ++        L          ++  L   
Sbjct: 267 FIVRAGTPGYDVRKIAGKIALRMVENGHITLTHCRVPDTDRLQETRGWRTTAEVLRLTRA 326

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A   V     +   A+ YA+ R   G  +    +++  +  +  ++    +L  RL+ 
Sbjct: 327 GVAWQGVGCALGAYELALKYAQTREQFGKPIGAFQLIQNHLVHMLGNVTTTLSLCLRLSQ 386

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D  + R E AA A+++               +A A E  GG+G + +  +A+H+ ++ 
Sbjct: 387 MADAGQMRDEHAALAKVVTAA-------RCRETVALARETFGGNGILLDHLVAKHFADTE 439

Query: 439 ANSILLGSGNAMVLDVLNLL 458
           A     G+     L V   +
Sbjct: 440 AIYSYEGTNEINTLVVGRAI 459


>gi|53724487|ref|YP_104639.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|67643473|ref|ZP_00442219.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|121601299|ref|YP_991477.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124383827|ref|YP_001027445.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126448360|ref|YP_001082411.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           mallei NCTC 10247]
 gi|167001218|ref|ZP_02267017.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
 gi|254175112|ref|ZP_04881773.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254201729|ref|ZP_04908093.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254207062|ref|ZP_04913413.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|254357543|ref|ZP_04973817.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|52427910|gb|AAU48503.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           23344]
 gi|121230109|gb|ABM52627.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124291847|gb|ABN01116.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126241230|gb|ABO04323.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147747623|gb|EDK54699.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147752604|gb|EDK59670.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|148026607|gb|EDK84692.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|160696157|gb|EDP86127.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|238524829|gb|EEP88260.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8
           horse 4]
 gi|243062939|gb|EES45125.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20]
          Length = 623

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 86/507 (16%), Positives = 165/507 (32%), Gaps = 88/507 (17%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +A    LM A          + 
Sbjct: 78  DFHALWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQAVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPEQKA--------------LRGPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + DG+  ++G K ++S+ M D      + +L ++         + C +VPR   D 
Sbjct: 184 VATPLGDGVCAVTGEKVYISAGMHDLTENTLYFVLGRIGSTAPDSFSLSCLIVPRFWRDD 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    L  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVALPRKMGLNGCANAHLVFGRSGTTRAHLLGNRRNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDAASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  V 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRVC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN----------LLEKGT 462
             A++  GG GY +   + ++ R+    SI  G+      D++           LL    
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVREKLGFGRKPLLLRYFR 482

Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR---------------FLTE 506
           +  +   + +E    ++       LR +  +L +  + +AR                  E
Sbjct: 483 DALDASLARIEPTAPATFAPWFAQLRGAADALARALESIARAVRDGHMHASSQVYTRFLE 542

Query: 507 KIALASSAAALYRAGMNDIADVFLENR 533
              L + A AL  A    IA+  L  R
Sbjct: 543 MFGLVACAWALLEAA--CIAERRLATR 567


>gi|303312773|ref|XP_003066398.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240106060|gb|EER24253.1| Acyl-CoA dehydrogenase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 445

 Score =  180 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 120/350 (34%), Gaps = 29/350 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD     VV  +  ++  + + L        +  P       +    T +   
Sbjct: 105 AGIDPEKWDVFHNLVVNDELARVGFSGV-LWGMNGGNGIGCP------PIMNFGTEQQRL 157

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++ PK+   E                 LG+TE   G+D++ I +  +++ +        K
Sbjct: 158 EYLPKVARGEIR-------------FCLGITEPDAGSDVSGIKTTAKRVGNKYIVNGAKK 204

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   +  L+      G+  +R+ N  G  ++ +  LEF 
Sbjct: 205 W-ITNAIFADYCTAAVRTGGPGRNGISLLIIPLKSKGVTRRRMYNS-GVNASGSTFLEFD 262

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A   +   RV + +A +YA  R   G  L
Sbjct: 263 DVEVPAENLIGKENQGFKYIMSNFNPERLGMASSCIRLSRVCVEDAYNYAITRETFGKPL 322

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I   +++   +     I    A   +LA +         E      M  + K    +   
Sbjct: 323 IYNQIIRAKFSKFGQLIEPCQAFLEQLAYTIQLNAKTGREID-VGGMTALLKVMSTRCLE 381

Query: 410 AVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V  EA + +GG+GY    +   I    R+     +  GS   +    + 
Sbjct: 382 KVCREAQQILGGAGYNKAGKGARIEAISRDVRVFVVGGGSEEILRDLAVR 431


>gi|288920251|ref|ZP_06414565.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288348355|gb|EFC82618.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 388

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 119/364 (32%), Gaps = 33/364 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               ++  K EF              G         F                   +   
Sbjct: 26  DYWADKDQKCEFP---WEFYNAFAEGGWLGIAIPTEFGGGGLGITEAALLLEEIAASGAG 82

Query: 148 AGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 M  ++   + +    +  + K+  P+                 S+ +  G+TE 
Sbjct: 83  MNGCSTMHLTIFGLNTIVKHGSADLQKEILPR-------------AADGSLHVCFGVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRL 261
             GTD   I++  Q++  G        W   +  S   I++ +   R         +   
Sbjct: 130 NAGTDTTRISTFAQRVDGGYVINGRKVWITKAGDSQKMILITRSTKREEVTRPTDGMTLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
           L D     +  + +  K+G  + ++ E+   N F      +G+       + D      +
Sbjct: 190 LIDIDREKIDLRAIP-KMGRNAVSSYEVFIDNLFVPESARIGEEGKGFKYLLDGLNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++   R ++ +A  YA+ R V    +     +   +A+  + + AA  ++ + A 
Sbjct: 249 LLAHEALGIGRAAIEKATRYAKERVVFERPIGQNQGVAFPLAEAQIRLDAAELMARQAAW 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D+      +A  A+ +       C +       +A++  GG GY  E  + R++RES 
Sbjct: 309 RYDQGLPCGPQANMAKWL-------CAEAGFQAADQAVQTHGGMGYAREYHVERYFRESR 361

Query: 439 ANSI 442
              I
Sbjct: 362 VMRI 365


>gi|242777315|ref|XP_002479009.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722628|gb|EED22046.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 400

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 124/362 (34%), Gaps = 25/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P           DG                    I  A + +    ++G  
Sbjct: 30  QECDQEEKDP--KEFHAALAKDGWLGIALPEELGGSGL----GISEATIMMQTITQSGAG 83

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M+ +  S       T P        K  ++E        +   S     G+TE   G D 
Sbjct: 84  MAGA-QSIHANVYATQP------LAKFGTKEQVEKLIPDIINGSWRTCFGVTEPNTGLDT 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLE--D 264
             + +   K SD  Y +SG K +++ + ++   I+LA+       +     +       D
Sbjct: 137 LRLKTTATKKSDNTYLVSGQKIWITCAQVASVMILLARTTPLEETQKPTEGLSMFAINLD 196

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            +  GL  +++K K+G R+    E+ F         L+G  N     +           A
Sbjct: 197 RTNPGLELKKIK-KMGGRAVDANEVFFDKYEILADTLIGKENDGFRIILHGMNAERCLLA 255

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     +L +A HYA  R V G  +     +   +AD  + + AA   ++  A  +D
Sbjct: 256 GEALGLGYAALEKASHYANERQVFGRPIGKNQAIAHPLADAYMRLEAAKLATYHAARIYD 315

Query: 382 EAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +K+ S  +           KY   + A      A+   GG GY  E  + R  RE    
Sbjct: 316 ASKTDSSISLQSVGTACNSAKYLAAEAAYTACERAVMTHGGMGYAVEYDVERWLRECFVP 375

Query: 441 SI 442
            I
Sbjct: 376 RI 377


>gi|254731364|ref|ZP_05189942.1| Ivd, isovaleryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
          Length = 278

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 21/291 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 5   LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 60

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 61  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 119

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 120 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 167

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 168 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 227

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               V  +   +  +  +++   +  M   L   + Y   R      + + 
Sbjct: 228 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEF 278


>gi|328958473|ref|YP_004375859.1| acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674797|gb|AEB30843.1| acyl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 385

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 123/372 (33%), Gaps = 29/372 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147
           P    +DK E  P     L +    G+    +DR    +       +   R+        
Sbjct: 35  PNASEYDKTEAFPE--EQLNQLSDMGVLRMPFDRLHGGLGGSFKDLLEVIRIVSRDCAST 92

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  L++ +  S   +    T R  +   P + S E                  GL E   
Sbjct: 93  ASILLTQTSMSLWPIYQYGTERQKQMHLPAMLSGE-------------TFGAFGLNELGM 139

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G D+  + +   +  +         +  ++  ++A+++ ++   + G       +     
Sbjct: 140 GNDLENMETLAVEKENHWELSGAKAFVSNAGKANAYLIGSKTIAKDGTSGYGIFIITAEM 199

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMS 324
            GL     + K+G R+     LEF          L          + +   + L  A  +
Sbjct: 200 RGLIIGNREEKMGIRALPVASLEFDQICVSKENLLGGSCNGEEQCQSISDHMRLSIAAQA 259

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +     S   A++Y  +    G  LID    +  +A++  ++ AA AL  ++A       
Sbjct: 260 IGIAEGSFERALNYVSQDRKFGQRLIDLRNTQFKLAEMYTELQAAAALLDQVA------- 312

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
              +      IM  + K      +  +   A++  GG GY+    I R+ R++   +   
Sbjct: 313 ---KNDQLDSIMVAMVKLKAANTSIEMTEMAIQVTGGYGYMRNNDIERYVRDAKLTAFYG 369

Query: 445 GSGNAMVLDVLN 456
           G+       +  
Sbjct: 370 GNLETQKDTIAK 381


>gi|297156612|gb|ADI06324.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 374

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 109/318 (34%), Gaps = 26/318 (8%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           EA   ++        + L  +P  +  W P++             +         L+E +
Sbjct: 79  EAETALALQGLGGYPIVLSGSPEQYARWMPEV-------------RAGRAVAAFALSEPQ 125

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D AA+  +      G + L G K ++S+ P +D  ++ A+     G   +   L   
Sbjct: 126 AGSDAAALGLRADPDGAGGWRLEGEKCWISNAPEADFTVVFARTTQGAGSRGITAFLVPA 185

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAI 322
              GL  +RL + +         L F          L       G       L+      
Sbjct: 186 DRPGLTGERL-DMLSPH--PIGSLAFDGVPVTREDVLGTPDKGFGVAMRTLNLLRPSVGA 242

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V   + +L  A+ +A  R   GG L D   +   +A++A    AA  L +  A ++DE
Sbjct: 243 FAVGMAQAALDAAVAHAGERTAFGGPLKDLQAVSHQLAEMATRTEAARLLVYAAATAYDE 302

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  ++       + K    + A  V+  A++  G         +   YRE  A  I
Sbjct: 303 GAPGIARSS------AMAKLLATETAQYVVDAAVQIHGARALRRGHLLEHLYREVRAPRI 356

Query: 443 LLGSGNAMVLDVLNLLEK 460
             G+       +   L +
Sbjct: 357 YEGATEVQRTIIAKELYR 374


>gi|194707498|gb|ACF87833.1| unknown [Zea mays]
          Length = 433

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 130/368 (35%), Gaps = 30/368 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF   +HA+   +   GL          P +   A  I  A +  +    +  ++ 
Sbjct: 77  WEKAEFP--FHAIPSLA-SLGLAGGTIKGYGCPGLSLTASAISIAEVARVDASCSTFILV 133

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  + S +AL  +    + + P +              +        LTE   G+D ++
Sbjct: 134 HSSLAMSTIALCGSEAQKQKYLPSLT-------------QFKTIGCWALTEPDYGSDASS 180

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +S  +D  I+LA+             +      GL   
Sbjct: 181 LRTAATKVPGGWHLDGQKRWIGNSTFADVLIILARNADTNQLNG---FIVKKGAPGLKAT 237

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVS 331
           +++NKIG R     ++  +  F      L       +  K+  +  +  A   +      
Sbjct: 238 KIENKIGLRMVQNGDIILNKVFVPEEDRLTGINSFQDINKVLAMSRIMVAWQPIGISMGV 297

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +  +  +I A   + +RL   ++  K       
Sbjct: 298 YDICHRYLKERKQFGAPLAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK------- 350

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                + + K W  K A  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 351 MTPGRSSLGKAWTSKKAREVVSLGRELLGGNGILVDFLVAKAFCDVEPIFS-YEGTYDIN 409

Query: 451 VLDVLNLL 458
            L     +
Sbjct: 410 SLVAGREI 417


>gi|330919411|ref|XP_003298605.1| hypothetical protein PTT_09367 [Pyrenophora teres f. teres 0-1]
 gi|311328134|gb|EFQ93314.1| hypothetical protein PTT_09367 [Pyrenophora teres f. teres 0-1]
          Length = 443

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 119/307 (38%), Gaps = 23/307 (7%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +      ++ + + P++ S                 I + +TE   G+D+A IT+  +K 
Sbjct: 134 IIKYGNKQLQERFLPELLSC-------------KKRICIAITEPEAGSDVANITTTAEKT 180

Query: 222 SDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKI 279
            DG  Y ++G K ++++ +   +  +A      G   +  ++       G+  +R+K   
Sbjct: 181 LDGKHYIINGSKKWITNGIWSDYATMAVRTSGPGPTGLSMVVVPLKGYPGVSMRRIKVG- 239

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           GN S+ T  +E  +       L+G+  +    +        L  AI +    RV+L+ A+
Sbjct: 240 GNISSGTTFIELDDVKVPVENLIGEEGMGMKYIMTNFNHERLSIAIGATRQARVALSAAV 299

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y  +R   G  L++QPV++  +A     + +  A   +          ++        +
Sbjct: 300 EYVIKREAFGKPLVEQPVVRHRLAKAGALLESQWAWVEQFVYQMVH-LPKATADIELGGL 358

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLD 453
             + K     +       A    GG+GY +      I R  RE P   I  GS + M+  
Sbjct: 359 TAMVKAQSGIVLNECAQTAQLLFGGNGYTKSGQGELIERISREVPGIRIPGGSEDVMLDL 418

Query: 454 VLNLLEK 460
            +  L K
Sbjct: 419 GVRQLVK 425


>gi|221066924|ref|ZP_03543029.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711947|gb|EED67315.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 406

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 16/282 (5%)

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                 AP+ +   AI   LTE + G+D  A+ ++  +  +  Y L+G K F+S  P +D
Sbjct: 132 QMEQFIAPVARAEKAICFALTESQAGSDAGALQTRAVREGEH-YVLTGRKRFISGSPFAD 190

Query: 242 AFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF-- 297
             +++A           +     D +  G+        + G   + T ++  +       
Sbjct: 191 FAVLMASTAPEGSAEREISAFFVDLAAPGVEVVGGYKTMAGQ--SHTGDIHLNAVRVPVA 248

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+     G       +  L      +   + +L +A  YA  R      +     ++
Sbjct: 249 QLIGEPGRGLGLALGRITVNRLLHCPAMLGLAQCALRDARDYALSRQQFDRSIAQFQSIQ 308

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A D  AA AL  + A + D           AR  A ++K +C + A A+   A+
Sbjct: 309 HMLADMATDWVAARALMIQTARALDAGID-------ARAQASMSKLFCSEKAFAIADRAV 361

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG G ++ R +   +R      +L G+       +   L
Sbjct: 362 QIHGGEGIVQGRRVEFLFRMLRMYRVLTGTSEIQRNTIAKEL 403


>gi|119504801|ref|ZP_01626879.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459406|gb|EAW40503.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium
           HTCC2080]
          Length = 386

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 127/364 (34%), Gaps = 27/364 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  ++   GL                    +   +   +      + S S+  + M+  
Sbjct: 38  DLKAQAKAQGLWALGHPAELGGGGLPFLDFAQLNEIIGRSYFGQMAVGSISMQDSIMLHQ 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISD 223
             +    + W   + + +  P              +GLTE    G+D   + S+G+   +
Sbjct: 98  FGSEAQREAWLEPLVAGDIYP-------------SVGLTEPDVAGSDPTLMQSRGELDGN 144

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGN 281
             + ++G KWF S   ++    +  + E           ++   +  G   +R+   +G+
Sbjct: 145 E-WLINGRKWFTSGANVAAFTTVFCETEPEQQRHGKFSAIIVPTNTPGYRIKRVVKTMGD 203

Query: 282 RSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
                 ELE  +        L     G     K L    +   +  +   + +     +Y
Sbjct: 204 TVGGHCELELDHVRVPAGNLLGERGKGFTIAQKRLGPGRIFHCMRWLGQAQRAFELMCNY 263

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R+  G +L ++  ++R IA+ A +I AA  ++   A   D           AR+   
Sbjct: 264 AGKRYAHGSLLSEKGEIQRYIAESAAEIQAARLMTLDAARVMDSGDD-------ARVQIA 316

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           + K+W  +M   VI  A++  G  G  E+  +   YRE+    I  G      + V   L
Sbjct: 317 LIKFWGARMLHNVIDRAIQVHGALGVTEDTPLEFMYREARYARIYDGPDEVHRMTVARKL 376

Query: 459 EKGT 462
            +  
Sbjct: 377 VQDP 380


>gi|322711176|gb|EFZ02750.1| hypothetical protein MAA_02332 [Metarhizium anisopliae ARSEF 23]
          Length = 399

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 123/367 (33%), Gaps = 36/367 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P            G        S           I  A + +    E+G  
Sbjct: 30  QERDQKEQDP--KEFHAAIAKGGWLGIALPESLGGSGL----GISEATMMMQTIAESGAG 83

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   T     +  P I S ++                 G+TE 
Sbjct: 84  MAGAQAIHANVYATQPLAKFGTQEQVNEAIPNIISGKWR-------------TCFGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF----LVPRL 261
             G +   +++  QK +DG        W   + ++   I+LA+   R         +   
Sbjct: 131 NAGLNTLGLSTTAQKTADGYSITGQKIWITCAQVASKMILLARTTPRDQAKKPSEGLSLF 190

Query: 262 LED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             D   +  GL  +R+K K+G R+    E+ F N       ++G        +       
Sbjct: 191 CIDLDRARPGLELRRIK-KMGGRAVDANEVFFDNYQIPASAVIGQEGRGFKMILHGMNAE 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++     +L++A  YAR R V    +     +   +AD  + + AA   ++  
Sbjct: 250 RCLLAGEALGLGYAALSKAASYARERVVFERPIGMNQGVAHPLADAYVKLEAAKLATYHA 309

Query: 377 ANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
           A  +D++         A  +A    KY   + A      A+   GG GY  E  + R +R
Sbjct: 310 ARLYDQSTHDPSIKQDAVGVAANSAKYVAAEAAFTACERAVLAHGGMGYAAEYDVERWFR 369

Query: 436 ESPANSI 442
           E     I
Sbjct: 370 ECLVPRI 376


>gi|293605039|ref|ZP_06687432.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292816541|gb|EFF75629.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 388

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 117/384 (30%), Gaps = 44/384 (11%)

Query: 71  QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130
             ++R+ +                D+    P    L      DG       + +      
Sbjct: 14  DAVSRICDRYP------DEYWLERDREGGFPE--PLHADLARDGWLGIAMPQEYGGAGLG 65

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTTPRVHKDWAPKIFSREYDP 185
                 AA +              S    ++  L       +      W           
Sbjct: 66  ---MTEAALMMQTIAASGAGFTGASAVHMNIFGLNPVVVFGSDEQRARWLE--------- 113

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
               P+          +TE   G D   ++++  +  D         W  ++ ++   ++
Sbjct: 114 ----PLIAGREKACFAVTEPDAGLDTTKLSTRAVRQGDEYVVHGRKIWISTAQVATKMLL 169

Query: 246 LAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL--- 298
           LA+             +     D     +  + ++ K+G ++  +  L        +   
Sbjct: 170 LARTTPLAEVDKPTQGLSLFYTDLDREKIEVREIE-KMGRKAVDSNMLFIDGLRIPVADR 228

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+       +        +  A  +V   R +L  A+ YA  R V G  +     ++  
Sbjct: 229 IGEEGRGFEYILHGLNPERILIAAEAVGIGRAALDRAVKYAGERTVFGRPIGQNQGIQHP 288

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +A   + + AA  + F+ A+ +D  +     A  A+ +A    Y  C+ A       +  
Sbjct: 289 LAQAWMQLEAADLMVFKAASVYDAGQPCGPYANTAKYLAAEAGYNACQTA-------VMT 341

Query: 419 IGGSGYIEERSIARHYRESPANSI 442
           +GG GY +E  + R  RES    I
Sbjct: 342 LGGMGYAKEYHVERLLRESFIPRI 365


>gi|119192516|ref|XP_001246864.1| hypothetical protein CIMG_00635 [Coccidioides immitis RS]
          Length = 424

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 74/420 (17%), Positives = 141/420 (33%), Gaps = 38/420 (9%)

Query: 48  ANFPSVVHKELELL-GEYVLSCT---AQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
           + +    H++L     EYV +     A+E  R        +  Y   G         P  
Sbjct: 18  SPYYDESHRKLRQFVREYVENDLMPYAEEWERSGQVPPEAVQKYVDNGFAI----IKPTK 73

Query: 104 HALLR-RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              +   ++  G+    WD     VV  +  ++  + + L        +  P       +
Sbjct: 74  REYMGGMTMPAGIDPEKWDVFHNLVVNDELARVGFSGV-LWGMNGGNGIGCP------PI 126

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T +   ++ PK+   E                 LG+TE   G+D++ I +  +++ 
Sbjct: 127 MNFGTEQQRLEYLPKVARGEIR-------------FCLGITEPDAGSDVSGIKTTAKRVG 173

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           +        KW +++ +   +   A   G  G   +  L+      G+  +R+ N  G  
Sbjct: 174 NKYIVNGAKKW-ITNAIFADYCTAAVRTGGPGRNGISLLIIPLKSKGVTRRRMYNS-GVN 231

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           ++ +  LEF +       L+G  N     +        L  A   +   RV + +A +YA
Sbjct: 232 ASGSTFLEFDDVEVPAENLIGKENQGFKYIMSNFNPERLGMASSCIRLSRVCVEDAYNYA 291

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  LI   +++   +     I    A   +LA +         E      M  +
Sbjct: 292 ITRETFGKPLIYNQIIRAKFSKFGQLIEPCQAFLEQLAYTIQLNAKTGREID-VGGMTAL 350

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            K    +    V  EA + +GG+GY    +   I    R+     +  GS   +    + 
Sbjct: 351 LKVMSTRCLEKVCREAQQILGGAGYNKAGKGARIEAISRDVRVFVVGGGSEEILRDLAVR 410


>gi|149411335|ref|XP_001508315.1| PREDICTED: similar to long-chain acyl-CoA dehydrogenase
           [Ornithorhynchus anatinus]
          Length = 317

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 20/299 (6%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +  ++   GL           V                +          S      +A
Sbjct: 31  REVWEKAGRQGLLGVNIAEKHGGVGGDLYSAAVVWEEQAYSNCTGPGFSLHSDIVMPYIA 90

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    +   PK+ + +                 + +TE   G+D+  + +  +K   
Sbjct: 91  NYGSEEQIQRLIPKMTAGQC-------------IGAIAMTEPGAGSDLQGVRTHAKKDGS 137

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             + L+G K F+++  MSD  I++A    E R     +   L +    G    R   K+G
Sbjct: 138 D-WILNGSKVFITNGWMSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLQKMG 196

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T EL F +       LLG  N     +        L  A ++VS       E   
Sbjct: 197 MKAQDTAELFFEDVRLPASALLGQENNGFYYLMAELPQERLLIAELAVSACEFMFEETRS 256

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           Y ++R   G  +     ++  +A++   I    A            +  S  A+ A+  
Sbjct: 257 YVKQRKAFGKTVAHLQTVQHKLAELKTRICVTRAFVDSCLQLHAAKRLDSATASMAKYW 315


>gi|62179421|ref|YP_215838.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224582671|ref|YP_002636469.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|62127054|gb|AAX64757.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224467198|gb|ACN45028.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322713891|gb|EFZ05462.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 387

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAVKREDRYVINGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|16764219|ref|NP_459834.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167550438|ref|ZP_02344195.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167992106|ref|ZP_02573204.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168236798|ref|ZP_02661856.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168263626|ref|ZP_02685599.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168819983|ref|ZP_02831983.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194735419|ref|YP_002113950.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197262786|ref|ZP_03162860.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204929925|ref|ZP_03220946.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|16419365|gb|AAL19793.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194710921|gb|ACF90142.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197241041|gb|EDY23661.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197290185|gb|EDY29542.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204320919|gb|EDZ06120.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324558|gb|EDZ12397.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205329596|gb|EDZ16360.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205343087|gb|EDZ29851.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347675|gb|EDZ34306.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|261246113|emb|CBG23916.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992616|gb|ACY87501.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157441|emb|CBW16930.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911882|dbj|BAJ35856.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085132|emb|CBY94919.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226439|gb|EFX51490.1| Putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616332|gb|EFY13241.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619582|gb|EFY16457.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622722|gb|EFY19567.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628634|gb|EFY25421.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631571|gb|EFY28327.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637098|gb|EFY33801.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641702|gb|EFY38338.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644504|gb|EFY41044.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648437|gb|EFY44889.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654172|gb|EFY50495.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658087|gb|EFY54354.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663561|gb|EFY59763.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670297|gb|EFY66437.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671533|gb|EFY67655.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676889|gb|EFY72956.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682814|gb|EFY78833.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686493|gb|EFY82475.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323129164|gb|ADX16594.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323194610|gb|EFZ79803.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196800|gb|EFZ81944.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204812|gb|EFZ89807.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208960|gb|EFZ93897.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209721|gb|EFZ94648.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215203|gb|EFZ99948.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222429|gb|EGA06805.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227529|gb|EGA11689.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229881|gb|EGA14004.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233106|gb|EGA17202.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240841|gb|EGA24883.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243158|gb|EGA27178.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248699|gb|EGA32627.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251701|gb|EGA35568.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257515|gb|EGA41203.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261484|gb|EGA45065.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267915|gb|EGA51394.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272018|gb|EGA55433.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332987789|gb|AEF06772.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 387

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAVKREDRYVINGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|84501820|ref|ZP_00999978.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
 gi|84389815|gb|EAQ02449.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase,
           centralregion:Acyl-CoA dehydrogenase, N-terminal
           [Oceanicola batsensis HTCC2597]
          Length = 388

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 30/347 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              R  ++ G         +        +A  +    +   A       +   V + + +
Sbjct: 40  EFYREMVNGGWVGLTLPSEYGGAGLGITEAALVMQTIVESGAGFTGASTIHSYVFAPNAI 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    K                 P+ K        +TE   G D + + ++  +  
Sbjct: 100 VVHGTEEQKKRML-------------TPLIKGEERACFAITEPNSGLDTSRLQTRAVRKG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           D         W  ++ M+   +++A+ +           +        P+ +  +++  K
Sbjct: 147 DHYVMTGEKVWPTAASMAQRMLVIARTKPIEECERPIDGLSLFYTRMDPDYVKTRKIP-K 205

Query: 279 IGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G  +  + ++            +G+       + D      +  A  SV   RVSL  A
Sbjct: 206 LGRNAVESCQIFIDGLKVPEEDRIGEEGKGFYYLLDGLNPERILVAAESVGLGRVSLRRA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA+ R V    +     ++  +A   +++ +A  +  + A  +D  +    EA  A+ 
Sbjct: 266 TEYAKERVVFDRPIGKNQGIQHPLAKSWMELESANLMMLKAATLYDAGEPCGAEANSAKY 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +     Y  C+ A       +   GG GY +E  + R+ RE     +
Sbjct: 326 LGAEAGYRACECA-------VMTHGGYGYAKEFDVERYLREVMIPRL 365


>gi|115526301|ref|YP_783212.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520248|gb|ABJ08232.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 390

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 126/362 (34%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 31  RKLDREMSYP--KAFVDALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGG 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      W PKI S E                  G+TE   GTD 
Sbjct: 88  CHAQMYTMGTLLRHGSDAQKAQWLPKIASGELR------------LQAFGVTEPTSGTDT 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
           +++ +  +K  +G Y ++G K + S +  SD  I+LA+   +         +   L D  
Sbjct: 136 SSLKTVAKKDDNGDYIVNGQKIWTSRAEYSDLMILLARTTPKEQSAKRTDGLSVFLVDMR 195

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
               +GL  + ++  + N +  T E+ F++       L+G        +        +  
Sbjct: 196 KARGHGLEIRPIRTMM-NHA--TTEVFFTDLKVPAANLIGVEGKGFRYILSGMNAERILI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +  +A+A  YA+ R V G  +     ++  IA    ++ AA  +       +
Sbjct: 253 ASECIGDAKWFIAKASAYAKDRVVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEAVRKY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 313 EAGMECGAEANMAKMLAA-------DASFEAANACIQTHGGFGFAEEYDVERKFRETRLY 365

Query: 441 SI 442
            +
Sbjct: 366 QV 367


>gi|324998086|ref|ZP_08119198.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 382

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 111/323 (34%), Gaps = 17/323 (5%)

Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195
            A+ L  +  + A   + P    A   +     R    +  +   RE  P     + +  
Sbjct: 60  GASLLDAVLVMMAITKVCPHSADALQASNFGAIRQVAKFGSEHVRREVLPL----LLRGE 115

Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
             +  G++E   G+ +  + +  +   D +       W    P +   ++  +       
Sbjct: 116 ALVTAGMSEPDAGSALTDLRTTARYEGDHVVLDGQKCWNSHGPDATHSVVWCRF--GPSS 173

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +  +L      G    + +  +     +  +L F          L  S      + I 
Sbjct: 174 RDIGAVLVPFDAPGFTRGKRE--LHMSGESHCQLFFDGCRVPKEYVLADSGALRSMLSIF 231

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               + +A  +++    +   A+ +A+ R   G  L +   ++   AD+ +++ AA  L 
Sbjct: 232 GVERMGNASRALALAETAYERAVEHAKVRKAFGKDLCEFQGLQWKFADMRVELDAARMLL 291

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            R   + D     + EAA A++ A        + A  V  EAM+  G SGY +E  +   
Sbjct: 292 LRAVANADAGAPDATEAAIAKLHAN-------RTAFQVANEAMQVFGASGYSQEYPLEYI 344

Query: 434 YRESPANSILLGSGNAMVLDVLN 456
            R +    I  GS   +   +  
Sbjct: 345 VRRTRGWMIAGGSVEILKNTIAG 367


>gi|327293948|ref|XP_003231670.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326466298|gb|EGD91751.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 441

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 82/455 (18%), Positives = 149/455 (32%), Gaps = 46/455 (10%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
              N P        +S    L  L + + +  H++ +          L   A E  R   
Sbjct: 1   MGTNSPNPV----PFSEPPYLCGLPSPYYTQAHRQFQKACRAFIWEHLHSHAMEWEREGT 56

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIR 136
                   +         +        L + +IHD  G+    WD  +            
Sbjct: 57  VPPHVFEVFAKHNMLLPNLPSPLPVAWLKKLNIHDILGVKVEDWDLIYTG---------- 106

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQK 193
              +YL      G    PS  +A                P +    SRE        M  
Sbjct: 107 ---IYLDEMSRCGLSGPPSSLTAG----------FAFGIPPMLAFGSRELQEKFLPDMLT 153

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252
             V   + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G 
Sbjct: 154 AKVRSCIAITEPDAGSDVANITTTAEKSADGKYYIINGEKKWITNGIWSDYTTMAVRTGG 213

Query: 253 VGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
            G   +  ++       G+  +RL    G     T  +E  N       L+G        
Sbjct: 214 PGPTGLSMIVVPLKGYPGVTMRRLPVS-GQVCGGTTYIELDNVKVPVENLIGQEGHGMRY 272

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           +        L  A+      RV+L+ A  Y  +R   G  L+DQPV++  ++    ++ +
Sbjct: 273 IMTNFNHERLTIAVGVTRQARVALSAAFEYCMKREAFGKTLMDQPVVRHRLSKAGAELES 332

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE-- 426
             A   +          + E       +  + K     +       A+   GG G+ +  
Sbjct: 333 MWAWVEQFLYQMSH-MPKVEGDRRLGGLTALAKAKAGMVLNECAQVAVLLFGGLGFTKSG 391

Query: 427 -ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               + +  R+ P   I  GS + ++   +  L K
Sbjct: 392 QGELVEKILRDVPGARIPGGSEDVLLDLAVRQLVK 426


>gi|328957925|ref|YP_004375311.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674249|gb|AEB30295.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 420

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/299 (20%), Positives = 104/299 (34%), Gaps = 28/299 (9%)

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKIS 222
           L  +P     W PK+             Q   +     LTE   G+D AA + +  ++  
Sbjct: 139 LGGSPEQQMRWLPKL-------------QNFELQTCFALTEPEHGSDTAAGLATTARREG 185

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D        +W   +  +D   + A+ VE       V   + +    GL    + +KI  
Sbjct: 186 DKWIINGEKRWIGGASSADLIPVYARDVEDNK----VKCFIVEKGQKGLSVDDIDDKIAL 241

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
           R      +   N        L    G  +  K+L       A      M  SL  A+ Y 
Sbjct: 242 RIVQNGNIHLDNVEVVESNRLQNINGFKDVAKVLYATRAGVAYAGAGMMAGSLEAALEYT 301

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  +    +++  +A +  +   A ALS RLA   +  +       ++ I A +
Sbjct: 302 TNRVQFGKPIASFQLVQEKLARMQGNAVNALALSARLAELQERGE-------FSEINASL 354

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            K          +A   E  GG+G   ER++AR + ++ A     G+     L +   L
Sbjct: 355 AKMNNSLRLRETVALGREVCGGNGITLERNVARFFCDAEAIYSYEGTHEMNALIMGRKL 413


>gi|330821061|ref|YP_004349923.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           gladioli BSR3]
 gi|327373056|gb|AEA64411.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           gladioli BSR3]
          Length = 615

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 160/467 (34%), Gaps = 78/467 (16%)

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGHLMS 153
           +V     +H L  R   +      W  +     R     +      +++ A         
Sbjct: 72  RVRIPADFHGLWARFRDE------WSSTLFGTERGLPPILTQVLYEMFMGANPSFMTYGG 125

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +  ++    TP                     P++ +        TE R GTD+ A
Sbjct: 126 FSRPAIKLLQSSGTPAQKA--------------LIEPLRASRWDACFCATEPRAGTDLTA 171

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRV------GCFLVPRLL 262
           +  + + +   +Y L G K F+S+ M +      + +L +VE          CF+VPR  
Sbjct: 172 VGLRAEPLDQDVYTLRGEKVFISAGMHELTENTLYFVLGRVESSAPDSFSLSCFVVPRFW 231

Query: 263 EDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG-DLNVSTGPVEDMK 313
            D +     PN +    L  K+G +  A   L F     T G+LLG   NV    +  + 
Sbjct: 232 PDEASGELRPNHVECIGLPRKMGLKGCANTHLVFGRGGATRGWLLGARRNVGLLQLIPLM 291

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIA 360
               + + +  V     +   A+ YARRR   G  +             I+   ++R + 
Sbjct: 292 NQARMSTGMFGVGVASNAYLHAVDYARRRRQ-GRPIEQASNTSAERVAIIEHADVQRMLI 350

Query: 361 DIALDIAAATALSFRLAN-----SFDEAKSRSEEA------AYARIMAPITKYWCCKMAP 409
           D+   +     L  +LA         EA   ++ A         +++ PI K +    A 
Sbjct: 351 DMKSRLDGCRGLLGKLAATATQALVLEAAPDADPALIERRRKLQQMLTPICKAFISDQAW 410

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFE 466
            +   A++  GG GY +   + +  R+    SI  G+      D++       + + L +
Sbjct: 411 RICESAIQVHGGLGYTDASPVEQCARDVKVLSIWEGTNYIQAQDLVRDKLGYGRQSRLIQ 470

Query: 467 QLFSTLEQDLGSSGKKVI-TILRDSISLCKEDKGLARFLTEKIALAS 512
                LE  L   G+      LR             R   E+IA A 
Sbjct: 471 YYRDELEIFLAQRGRADTPAELRPCFDAL-------RAGAERIATAL 510


>gi|78062246|ref|YP_372154.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77970131|gb|ABB11510.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 400

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 113/358 (31%), Gaps = 26/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL +    G+    +     P             L  +    +      +  +   +A
Sbjct: 59  FELLPKFKALGIAGLPFQGYGCPGKSTTLMGFVMMELARVDASISTFFGVHTGLAMGSIA 118

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKIS 222
           +  +    + W P             PM         GLTE   G+     + +  ++  
Sbjct: 119 ICGSDEQKRTWLP-------------PMAALDKIGSFGLTEPLVGSGASGGLLTSARRDG 165

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D        KW  ++   D  ++ A+             + +    G    ++++K+  R
Sbjct: 166 DTWILNGQKKWIGNATWGDVTVIWARDVADNQVKG---FIVENRTPGFHVDKIQHKMALR 222

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +  ++        L  +    +  ++  +     A  SV     +   A+ YA+
Sbjct: 223 VVQNGLITMTDCRVSEANRLQNANSFKDTAQVLKMTRAAVAWESVGCATGAYEHAVRYAQ 282

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +    +++  +  +  +I +  AL  RL+   D    + E A+ A+ +  + 
Sbjct: 283 ERQQFGRPIASFQLVQDLLFRMLCNITSTQALCHRLSQMQDAGIMQDEHASLAKGLCTV- 341

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                      +  A E +G +G + +  + R   ++ A     G+     L V   +
Sbjct: 342 ------RMRETVGWARELLGANGILLDHHVGRFVADAEALYSYEGTREMNALIVGRAV 393


>gi|317401765|gb|EFV82382.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 408

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 145/429 (33%), Gaps = 60/429 (13%)

Query: 56  KELELLGEYVLSCTAQEL----ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
            ELE   + V +   +EL    A  ANY+  +           D+V           ++ 
Sbjct: 7   PELEDYRQRVRAFVDRELIPLEADRANYDDHE----NIDAALLDRVR---------AKAR 53

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL----EAGHLMSPSVTSASMVALMTT 167
             GL      R              AA    M +      A +  +P   +  ++A +  
Sbjct: 54  EAGLWALQMPRKRGGQGLP--MVGLAACYEEMNRSIFGPAAFNAAAPDDGNMRVLAQVAR 111

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGI 225
           P     W               P+    V     +TE     G+D + + +   +  D  
Sbjct: 112 PDQQDRWL-------------QPIIDGKVRSSFVMTEPSPGSGSDPSMMRTTATRQGD-K 157

Query: 226 YCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN--R 282
           + + G KWF++   +   FI++A+         +   L D    G    R    +G    
Sbjct: 158 WLIHGRKWFITGAGAAQHFILIARTSDDA-RKGLSAFLFDADQPGWRIVRRIPIMGPEEH 216

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMS-----VSGMRVSLAEAI 336
                ELEF    G  + D N      + +K   I L  A ++     +   R ++A A+
Sbjct: 217 GGH-CELEFD---GLEIPDENRLMEVGDGLKLTQIRLGPARLTHCMRWLGLARRAMAVAV 272

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   R   G  L D+  ++  + D A+ I     L+ R A   D+         +AR  
Sbjct: 273 DYVGERSSFGQKLADREGVQWLLGDAAMQIEIGRLLTMRAAARLDQGD-------FARKE 325

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K    +    V+  A++  G  GY ++  +   YR +    ++ G+     + +  
Sbjct: 326 ISMAKIVVSETLHKVVDTALQLNGARGYSKDTPLEWIYRYARQARLVDGASEVHKMVLAR 385

Query: 457 LLEKGTNLF 465
            L    + F
Sbjct: 386 YLMDQGDAF 394


>gi|149184465|ref|ZP_01862783.1| acyl-CoA dehydrogenase, putative [Erythrobacter sp. SD-21]
 gi|148831785|gb|EDL50218.1| acyl-CoA dehydrogenase, putative [Erythrobacter sp. SD-21]
          Length = 555

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 154/440 (35%), Gaps = 49/440 (11%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL-ARMANYNTPQLHAYGPGGER 93
           N   + + L A++A+         E  G+  L     +  +   N  TP  H +      
Sbjct: 141 NTADNRAALAAMLADGGRP----FEAFGDETLDMIRDQFRSFTRNRITPNAHQW----HL 192

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D++        ++      G+        +  +   ++     +       + AG L +
Sbjct: 193 ADQLIP----IKVVEEMAELGVFGVCITEEYGGLGLGKSAMCLVSEELSRGWICAGSLGT 248

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +  ++    T      + PK+ +    PT                TE   G+D+A+
Sbjct: 249 RSEIAGELIGENGTEEQKAKFLPKLANGSMLPTAV-------------FTEPDTGSDLAS 295

Query: 214 ITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPN--- 268
           + ++     DG + L G K +++ +  +D   +L +      G   +  LL + +     
Sbjct: 296 VRTRATIAEDGTWRLKGAKTWITHAARADLMTVLCRTNPDKAGYGSLSMLLAEKTRGNDE 355

Query: 269 ------GLCYQRLKNKIGNRSNATVELEFSN--TFGFLLGDLNVSTGPVEDMKIL--IYL 318
                 G+    ++  +G R      L F +       L       G  + M+      +
Sbjct: 356 NPFPDAGIAGDEIE-VLGYRGMKEYTLGFEDFAVAADGLLGGEEGKGFKQLMRTFEGARI 414

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A  ++     +    + YA  R   G  L+  P +   +A +  ++  A  L++  A 
Sbjct: 415 QTAARAIGVGWNAFDLGLAYALERKQFGKTLLSFPRVSDKLAMMVCELVMARELTYAAAR 474

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D       EA  A+++A        ++A A    A++  GG+GY  E  I+R   ++ 
Sbjct: 475 RKDRGVRCDIEAGMAKLLAA-------RVAWANADNALQIHGGNGYALEYPISRVLCDAR 527

Query: 439 ANSILLGSGNAMVLDVLNLL 458
             +I  G+G      +   L
Sbjct: 528 ILNIFEGAGEIQAQVIARGL 547


>gi|156061183|ref|XP_001596514.1| hypothetical protein SS1G_02734 [Sclerotinia sclerotiorum 1980]
 gi|154700138|gb|EDN99876.1| hypothetical protein SS1G_02734 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 449

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 120/382 (31%), Gaps = 19/382 (4%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    W+     P      RR    G    I             +     +        +
Sbjct: 65  PYAFDWESAGKVPDTARAWRRHAQLGYLALI-------TGLPDVNLPGDIKFEEWDSWHS 117

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEK 205
             +       A    L      ++   P +    + E        +   S+   LG+TE 
Sbjct: 118 LIVTDEISRVAYTGVLWGLGGGNEIGVPPLVNFGTEEQKAKFLPGVANGSIRFCLGITEP 177

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
             G+D+A I +   K  D        KW +++ +   ++  A   G  G   +  L+   
Sbjct: 178 DAGSDVANIKTTAIKKDDHYIVNGSKKW-ITNAIWADYVTAAVRTGGAGAAGISLLIIPL 236

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G+  +R+ +  G  ++ +  + F +       LL   N     +           A 
Sbjct: 237 KAEGVS-RRMMHNSGVGASGSTFITFDDVKVPVENLLHKENRGFEVIMSNFNAERKTLAT 295

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++   RV   +A  +A  R   G  LI+ PV++     +   I  A A   +L    + 
Sbjct: 296 SAIRLSRVCAEDAWKHACTRETFGKKLIENPVIRAKFVKMGRMIEPAQAFLEQLTWLIEL 355

Query: 383 AKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESP 438
           ++   E+       M  + K    +     + EA + +GG GY        I    R+  
Sbjct: 356 SRKGGEDNDVRIGGMTAMLKVVSTRCLEKCVREAQQVMGGLGYARGGKGGRIEAISRDVR 415

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
             ++  GS   +    +    K
Sbjct: 416 VMAVGGGSEEILSELAIKEETK 437


>gi|163839283|ref|YP_001623688.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162952759|gb|ABY22274.1| acyl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 398

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 110/314 (35%), Gaps = 26/314 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  +          V L+ +      W P I+S                    GLTE  G
Sbjct: 101 ATFMGVHDGLFTGSVELLASEEQKALWLPDIYSM-------------KKIGAFGLTEPLG 147

Query: 208 GTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+ +A    +  ++  D        +W  ++  SD  ++ A+    V    V   + D +
Sbjct: 148 GSYVAGGTRTTAKREGDNWVLNGAKRWIGNATFSDWVVIYAR---DVDDNQVKAFMVDTA 204

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMS 324
             G    +++NKI  RS    ++   N        L       +  K+L    L  A  +
Sbjct: 205 TPGYKATKIENKISLRSVQNADITLENLVISNDFKLEHGNSFRDTNKVLKVTRLAVAWQA 264

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V     +   A  YA  R   G  L    +++  +  I  +  A+  +  RL+   D  +
Sbjct: 265 VGQQMAAFDVARRYAVERVQFGRPLASFQLIQDQLVQILGNTVASMGMMVRLSQLEDLGQ 324

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           ++ E++A A       K +        +A     +GG+G + +  +A+ + ++ A     
Sbjct: 325 AKDEQSALA-------KAFTSARMRESVAIGRSILGGNGIVTDYEMAKIFSDAEAIYSYE 377

Query: 445 GSGNAMVLDVLNLL 458
           G+     L     +
Sbjct: 378 GTYEINSLVTARAI 391


>gi|254773799|ref|ZP_05215315.1| FadE12_1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 388

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 116/357 (32%), Gaps = 32/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLM 152
           D+    P            G         +                       + A   +
Sbjct: 32  DQAHEFPT--EFYNAIAEGGWLGMTIPTEYGGHGLGTTEATILLEEVAKSGGAMNAASSI 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     V +  +  +     P + + +               +  G+TE   G D +
Sbjct: 90  HLSIFGMQPVVVHGSDELKARTLPAVATGQVH-------------VCFGVTEPGAGLDTS 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN 268
            IT+  ++  D         W   +  SD  ++L + +           +   + D   +
Sbjct: 137 RITTFAKRDGDRYIVNGRKVWISKAMESDKILLLTRTQAYDEVTKKTDGMTLFITDLDRS 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +  + +  K+G  + ++ EL   N    +   +G+       + D      +  A  ++
Sbjct: 197 RVDIRPI-RKMGRNAVSSNELFIDNLEVPVEDRIGEEGKGFQYILDGLNPERMLIAAEAL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV+L +A+ Y   R V G  +     ++  +AD    + AA  +  +    +D  K 
Sbjct: 256 GIGRVALDKAVKYGNEREVFGRPIGMNQGLQFPLADSLARLDAAELMLRKATWLYDNGKP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              EA  A+ +       C         +A++  GG GY EE  I R++RE+    I
Sbjct: 316 CGREANTAKYL-------CADAGFTAADQALQTHGGMGYAEEYHITRYFREARLMKI 365


>gi|255582668|ref|XP_002532113.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223528216|gb|EEF30275.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 440

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 25/310 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  S  +   +AL  +    + + P +              + S      LTE   G
Sbjct: 135 TFILVHSSLAMLTIALCGSEAQKQKYLPSL-------------AQLSTVACWALTEPEYG 181

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +A+ +  +K+  G       +W  +S  +D  ++ A+         +   +      
Sbjct: 182 SDASALKTTARKVEGGWILDGQKRWIGNSTFADVLVVFAR---NTSTEQINGYIVKKDAP 238

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           GL   +++NKIG R     ++     F      L       +  K+L    +  A   + 
Sbjct: 239 GLTATKIENKIGLRMVQNGDILLKQVFIPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIG 298

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                      Y + R   G  L    + ++ +  +  ++ A   + +RL   ++  K  
Sbjct: 299 ISMGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCKLYETGK-- 356

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                     A + K W    A    A   E +GG+G + +  +A+ + +        G+
Sbjct: 357 -----MTSGHASMAKAWITSKARETAATGRELLGGNGILADFLVAKAFCDLEPIYTYEGT 411

Query: 447 GNAMVLDVLN 456
            +   L    
Sbjct: 412 YDINTLVTGR 421


>gi|328876781|gb|EGG25144.1| putative acyl-CoA oxidase [Dictyostelium fasciculatum]
          Length = 433

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 109/307 (35%), Gaps = 32/307 (10%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           S   +    +      + PK             M         GLTE   G+D + +  +
Sbjct: 146 SMLPIYYCGSELQKLKYLPK-------------MAAMDSIGCFGLTEPLAGSDASGLLCE 192

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +K+ +G       +W  ++P +D  I+ A+             + +    GL  + + N
Sbjct: 193 ARKVDNGWILNGEKRWIGNAPFADIIIVWARDTESKKIKG---FIVEKGTPGLNVETINN 249

Query: 278 KIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           KI  R      + F       +       D N   G       L  + +A +S+     +
Sbjct: 250 KISLRMVQNGHIYFKECLISDDQRLPNANDFNSGPGKC---LFLTRIMAAWISLGVAANA 306

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    +++  +  +  ++ A T +  R+++ FD+ K       
Sbjct: 307 YESCFKYVQSRKQFGTPLSKFQLIQERLVKMLGNLQAMTLMCLRVSHLFDQQK------- 359

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +     + K +C      +++ A EC+GG+G + +  +AR + +  A     GS +   
Sbjct: 360 LSYGQIGLLKAYCTSHGREIVSLARECVGGNGIVTDYGVARSFVDMEAIHTFEGSYDINT 419

Query: 452 LDVLNLL 458
           L     +
Sbjct: 420 LIAAREI 426


>gi|119473937|ref|XP_001258844.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119406997|gb|EAW16947.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 441

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/302 (21%), Positives = 115/302 (38%), Gaps = 10/302 (3%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL 235
           K  S+E        +        + +TE   G+D+A IT+   K  DG  Y ++G K ++
Sbjct: 137 KYGSKELQERFLPDLLTGRKRGCIAITEPEAGSDVANITTTATKTPDGKYYIINGTKKWI 196

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++ +   +  +A   G  G   +  +L       G+  +RLK   G  +  T  +E  + 
Sbjct: 197 TNGIWSDYTTMAVRTGGPGAAGLSVILVPLKGHPGVTMRRLKVS-GQITGGTTYIELDDV 255

Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
               G L+G        +        L  A+      RV+LA A  Y  +R   G  L+D
Sbjct: 256 KVPVGNLIGREGDGMRIIMTNFNHERLTIAVGVTRQARVALAAAFQYTMKREAFGKTLMD 315

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           QPV++  +A    ++    A   ++        S+ E       +  + K     +    
Sbjct: 316 QPVVRHRLAKAGAELETMWAWVEQILYQLCH-LSKEEADQQLGGITALAKAKAAMVLNEC 374

Query: 412 IAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
              A+   GG+GY    +   +    R+ P   I  GS + ++   +  L K   L E+ 
Sbjct: 375 AQCAVLLFGGAGYTASGQGELVEAILRDVPGARIPGGSEDVLLDLAVRQLVKIYQLGEKK 434

Query: 469 FS 470
            +
Sbjct: 435 LA 436


>gi|161524746|ref|YP_001579758.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189350500|ref|YP_001946128.1| acyl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|160342175|gb|ABX15261.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189334522|dbj|BAG43592.1| acyl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616]
          Length = 388

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 114/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H         G      D ++        +A  +  A     A L     +  ++   + 
Sbjct: 39  HDFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRAISASGAGLSGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  +      + P             P+          +TE   G D   +T+Q ++ 
Sbjct: 99  VQVFGSDAQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLTTQARRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ +++  +++A+             +     D   + +  + + +
Sbjct: 146 GDHYVLSGRKIWISTAQVANKMLIIARTTPLEQVAKPTDGLSLFYTDLDRSRVEVREI-D 204

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G ++  +  L   N       L+G        +        +  A  ++   + +L  
Sbjct: 205 KMGRKAVDSNMLFIDNLRVPRDDLIGAEGEGFRYLLHGLNPERILIAAEAIGLGQAALRR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A   + + AA  +  + A  +D  +    EA  A+
Sbjct: 265 ATQYANERVVFGRPIGQNQAIQHPLALTWMQLEAAWLMVMKAATRYDAGQPCGAEANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     +  C+ A A         GG GY +E  + R+ RE     +
Sbjct: 325 YLGAEAAFHACQTAVA-------THGGMGYAKEYHVERYLRECMIPRL 365


>gi|107101651|ref|ZP_01365569.1| hypothetical protein PaerPA_01002695 [Pseudomonas aeruginosa PACS2]
          Length = 390

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+  ++GP    R D          L+ R+   GL      R    +    +H  +A
Sbjct: 28  ENDPRQDSHGPSDALRQD----------LVARARAAGLLTPHASREMGGLAL--SHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTATRDGDD-YLINGRKWLITGAEGADFGIVMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LHFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   +  + R +R+     I  G      + +   L
Sbjct: 347 GVTGDTVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|108798556|ref|YP_638753.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867655|ref|YP_937607.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434154|ref|YP_001069845.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108768975|gb|ABG07697.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693744|gb|ABL90817.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126233954|gb|ABN97354.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 412

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 123/428 (28%), Gaps = 42/428 (9%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP-AW-- 103
           + +    V  E++   E  +    +E  +  + +             W+       AW  
Sbjct: 5   LPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYART------DWENGGIPQRAWED 58

Query: 104 --HALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQLEAGHLMSP 154
               + RR+   G         F               H      L L   L+    +  
Sbjct: 59  LLDEMRRRADAAGWLRYGLPEQFGGRGGSNIDMAVIREHLAHK-GLGLHNDLQDESSIVG 117

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +     M+    T +   +W   + +                ++  GLTE   G+D   +
Sbjct: 118 NFPQVIMMDRFGTEQQKAEWIEAMLTG-------------KRSMAFGLTEPNHGSDATWL 164

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQ 273
            ++ ++  DG       +W      +   ++ A+  G  G    +   L      G    
Sbjct: 165 ETRAERDGDGWVINGTKRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVP 224

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
                  N      E+  ++       +LG+++      +       +  A  S+   + 
Sbjct: 225 YYWWTF-NMPTDHGEVVLTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQY 283

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            +  A+ YA +R V G  L     ++  + ++  +      L +  A   D +       
Sbjct: 284 CIDRAVEYAGQRTVFGKPLAVNQAVQWPLVELQTEAQMVRLLVYYAATELDRSHHME--- 340

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   +  Y   ++       AM+  GG GY         YR      I  G+    
Sbjct: 341 --VSDKVSMANYRANRLVCEAADRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQ 398

Query: 451 VLDVLNLL 458
           +  V   L
Sbjct: 399 IRRVAQRL 406


>gi|89333132|dbj|BAE82727.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 389

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 123/362 (33%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +    +  G         +           +      M++         +      + 
Sbjct: 47  QKIAEAFVEHGFALLGIPEEYGGTPCDI--TTQMLVTEEMSKFGVPFPCFSNSLLIDDIL 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                +          + EY         K   A  LG+TE   G+D +A+ +   + + 
Sbjct: 105 HFGNEQQKA------ITMEYAK-------KGLCAFSLGITEPGAGSDDSAMMATATRRNG 151

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            IY  + HK F++ +      + L + +        +     D S  G+     + KIG 
Sbjct: 152 KIYI-NAHKTFITEAKQRPYMLCLTRELNAPNPHKAISMWWVDMSKPGVKVMPWE-KIGG 209

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
            +  T E+   +        + V   G +  M       +  A   +     +  +A  Y
Sbjct: 210 NTAPTYEVYLEDVELEEEDLVGVEGEGFMNLMGNFEVERIQIAAGVLGWAEAAFEDAAVY 269

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  I ++A+ I     L ++     +   S        +I + 
Sbjct: 270 ANQRVQFGKPIGSFQLIQEKIVEMAIKIENMRNLVYKACWERENGMS-------LQISSA 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            TKY+C + A  VI +AM+ +GG GY ++  I+R +R+        G+   M+      +
Sbjct: 323 TTKYYCVRAANQVIDDAMQIMGGIGYTKDHRISRLWRDVRNTRFGGGTDEIMIHIAGRAI 382

Query: 459 EK 460
            K
Sbjct: 383 LK 384


>gi|313110914|ref|ZP_07796757.1| Probable Acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|310883259|gb|EFQ41853.1| Probable Acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 390

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+  ++GP    R D          L+ R+   GL      R    +    +H  +A
Sbjct: 28  ENDPRQDSHGPSDALRQD----------LVARARAAGLLTPHASREMGGLAL--SHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTAIRDGDD-YLINGRKWLITGAEGADFGIVMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGITHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   E  + R +R+     I  G      + +   L
Sbjct: 347 GVTGETVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|161353801|ref|YP_517171.2| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51]
          Length = 382

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 123/362 (33%), Gaps = 29/362 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +    +  G         +           +      M++         +      + 
Sbjct: 40  QKIAEAFVEHGFALLGIPEEYGGTPCDI--TTQMLVTEEMSKFGVPFPCFSNSLLIDDIL 97

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
                +          + EY         K   A  LG+TE   G+D +A+ +   + + 
Sbjct: 98  HFGNEQQKA------ITMEYAK-------KGLCAFSLGITEPGAGSDDSAMMATATRRNG 144

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            IY  + HK F++ +      + L + +        +     D S  G+     + KIG 
Sbjct: 145 KIYI-NAHKTFITEAKQRPYMLCLTRELNAPNPHKAISMWWVDMSKPGVKVMPWE-KIGG 202

Query: 282 RSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHY 338
            +  T E+   +        + V   G +  M       +  A   +     +  +A  Y
Sbjct: 203 NTAPTYEVYLEDVELEEEDLVGVEGEGFMNLMGNFEVERIQIAAGVLGWAEAAFEDAAVY 262

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A +R   G  +    +++  I ++A+ I     L ++     +   S        +I + 
Sbjct: 263 ANQRVQFGKPIGSFQLIQEKIVEMAIKIENMRNLVYKACWERENGMS-------LQISSA 315

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            TKY+C + A  VI +AM+ +GG GY ++  I+R +R+        G+   M+      +
Sbjct: 316 TTKYYCVRAANQVIDDAMQIMGGIGYTKDHRISRLWRDVRNTRFGGGTDEIMIHIAGRAI 375

Query: 459 EK 460
            K
Sbjct: 376 LK 377


>gi|312221598|emb|CBY01538.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 438

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 79/366 (21%), Positives = 133/366 (36%), Gaps = 34/366 (9%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL------------MAQLEAGHLMSPSVT 157
               G   +     + P        I AA+L +            M       L   SV 
Sbjct: 75  WASSGFAFTEVPAQYRPAQVPGPAGIPAAQLDVFHLMVLADEGARMEGGLGTALGGASVI 134

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V    +      W P +F+ E              +  LG+TE  GG+D+A I + 
Sbjct: 135 GVPPVVEHGSEEQKASWLPGLFTWE-------------TSFALGITEPSGGSDVANIETT 181

Query: 218 GQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             K  DG  Y ++G+K +++       +  A   G  G   +  L+   S  GL ++R+ 
Sbjct: 182 ATKSPDGTHYIVNGYKKWITGMPWATHMTTAVRTGGPGMTGISVLVIPTSSRGLTHRRIA 241

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           N  G  S     +E  N     G LLG+ N     +           +I      R  L+
Sbjct: 242 NS-GQNSGGASFVELDNVQVPVGNLLGEENKGFRIIMKNFNKERFLMSIGCNRKARTCLS 300

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           E+  YA  RH  G  L+   ++   +A +A  I +  A   +LA    +++   ++A  A
Sbjct: 301 ESTAYAHTRHTFGKPLVSNQIIAHKLATMARYIESHWAWLEQLAYHIQQSRDGWQDAEIA 360

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAM 450
             +A +TK    ++      EA +  GG+GY +      + +  R+     +  GS   +
Sbjct: 361 GQIA-LTKVHGGRILEMANREAQQIFGGAGYQKGGPGAVVEQMSRDLRMMVVGGGSEEII 419

Query: 451 VLDVLN 456
               L 
Sbjct: 420 ADLALR 425


>gi|299531019|ref|ZP_07044432.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
 gi|298720976|gb|EFI61920.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas
           testosteroni S44]
          Length = 406

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 108/282 (38%), Gaps = 16/282 (5%)

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSD 241
                  P+ +   AI   LTE + G+D  A+ ++     +  Y L+G K F+S  P +D
Sbjct: 132 QMEQFILPVARAEKAICFALTESQAGSDAGAVQTRAVCEGEH-YVLTGRKRFISGSPFAD 190

Query: 242 AFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF-- 297
             +++A           +     D +  G+        + G   + T ++  ++      
Sbjct: 191 FAVLMASTAPEGSVEREISAFFVDLAAPGVEVVSGYKTMAGQ--SHTGDIHLNSVRVPVA 248

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+     G       +  L      +   + +L +A  YA  R   G  +     ++
Sbjct: 249 QLIGEPGRGLGLALGRITVNRLLHCPAMLGLAQCALRDARDYALSRQQFGRSIAQFQSIQ 308

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +AD+A D  AA AL    A + D           AR  A ++K +C + A A+   A+
Sbjct: 309 HMLADMATDWMAARALMIHTARALDAGID-------ARAQASMSKLFCSEKAFAIADRAV 361

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG G ++ R +   +R      +L G+       +   L
Sbjct: 362 QIHGGEGIVQGRRVEFLFRMLRMYRVLTGTSEIQRNTIAKEL 403


>gi|194444953|ref|YP_002040098.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|207856292|ref|YP_002242943.1| acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|194403616|gb|ACF63838.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|206708095|emb|CAR32386.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326627152|gb|EGE33495.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 387

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAVKREDRYVINGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|145588202|ref|YP_001154799.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046608|gb|ABP33235.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 415

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 135/369 (36%), Gaps = 44/369 (11%)

Query: 104 HALLRRSIHDGL---HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
             L+  +  +GL   H SI          ++A     A    +  + A ++ +P   +  
Sbjct: 70  KDLIELARKEGLLTPHASIEMGGLGLSHVEKAVIFEEAGYSCLGPI-AMNIHAPDEGNIH 128

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQG 218
           ++  + TP   + W               P+ +  +     +TE     G+D + + +  
Sbjct: 129 LMEEVATPEQKERWLK-------------PLAQGKIRSCFAMTEPAPGAGSDPSMLATTA 175

Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y ++G KWF++    +D  I++A  E           L D +  G+   R  +
Sbjct: 176 IKDGDD-YLINGRKWFITGAEGADFVIIMALGEDGTA----TMFLSDMNVPGIELVRNMD 230

Query: 278 KI-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +     G        L+F+N       +LG+        +       L   +  +   R
Sbjct: 231 AMDSCFTGGHG----VLQFTNLRVPAKNILGEFGKGFKYAQVRLAPARLTHCMRWLGQAR 286

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   AI YA++R   G IL     +   +AD  +D+  +     + A   D+ +  + E
Sbjct: 287 RAQDIAIAYAQQREAFGKILGAHEGVGFMLADNDMDLQTSRLHILQTAWLLDQGQRCNYE 346

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           ++ A+++    ++        V+   ++ +GG G   E ++ + +++     I  G    
Sbjct: 347 SSRAKVVCSEAEW-------RVVDRCVQILGGQGVTGETALMKIFKDMRGFRIYDGPSEV 399

Query: 450 MVLDVLNLL 458
               +   L
Sbjct: 400 HRWSMARKL 408


>gi|227548733|ref|ZP_03978782.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079200|gb|EEI17163.1| possible acyl-CoA oxidase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 401

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 118/357 (33%), Gaps = 32/357 (8%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
              +   GL     D   +P +  +A ++       +    A      +  +   +    
Sbjct: 64  AEEAARRGLIRDGIDIEGQPAMSIRAKRMIGMEASRLDASTATAFGVQAGLAMQSINSFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           T      +               PM +  +     LTE   G+D  A+ +  ++  D   
Sbjct: 124 TDEQKAKYL-------------GPMSRMEIRGAFALTEPDHGSDSIALETTAKRDGDDWV 170

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
                KW     +    ++ A++E       V   + D    G     +  K   R    
Sbjct: 171 INGEKKWIGHGSVGHITVVYARMEDGK----VGAFIVDQDQEGYEATTITGKGSLRGIPQ 226

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARR 341
            E++ +N        L       +  K+L+   S  + V+   + LA   +     YA  
Sbjct: 227 AEIKLNNVRVSDDRRLPGCKSFRDTAKVLM---STRIGVAWSALGLAIDCYEKVLKYASE 283

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           RH  G  LI   ++++ +AD+ +D+        RL    +  +   ++AA A       K
Sbjct: 284 RHQFGRPLIKNQIIQQRLADMLMDVTGMALYCKRLLELEESGEVTEQQAALA-------K 336

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  V A A +  GG G + E  + RH+ +        G+     L V   +
Sbjct: 337 VHNTRAARRVAANARDMFGGVGILLENDVIRHFTDIETLHTYEGTDTMQSLIVGKSI 393


>gi|120608884|ref|YP_968562.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120587348|gb|ABM30788.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 118/347 (34%), Gaps = 29/347 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H   +     G        ++        +A  +  A     A L     +  ++     
Sbjct: 39  HDFHQALADAGWLGIAMPEAYGGAGLGISEAALMMHAISATGAGLSGASAVHMNIFGLHP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  T      W P             P+ +       G+TE   G +   + ++  + 
Sbjct: 99  VVVFGTEEQKARWLP-------------PLIRGRDKACFGVTEPNTGLNTLGLKTRAVRE 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNK 278
            D         W  ++ ++   ++LA+        G   +     D   + +  + ++ K
Sbjct: 146 GDHYVVHGQKVWISTAQVASKILLLARTTPLEECRGTEGLSLFYTDLDRSTVEVREIE-K 204

Query: 279 IGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G +   + ++        +   +G+       +        +  A  +V   R +LA A
Sbjct: 205 LGRKCVDSNQVFIDGLRIPVEDRVGEEGKGFQYILHGLNPERILIASEAVGLGRAALARA 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA+ R V G  +     ++  +A   +++ AA  +  + A  +D  +S   EA  A+ 
Sbjct: 265 AGYAQEREVFGRPIGQNQGIQHPLAQSWMELEAAHLMVQKAAWLYDRHQSCGAEANAAKY 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +A    Y  C+ A       +   GG GY  E  + R+ RES    +
Sbjct: 325 LAAEACYHACERA-------ILTHGGMGYAREYHVERYLRESWIPRL 364


>gi|317122166|ref|YP_004102169.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315592146|gb|ADU51442.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 424

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 122/372 (32%), Gaps = 39/372 (10%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSAS 160
             A+ R     GL      +    +            +   + L   A    +P   +  
Sbjct: 43  MKAIQRAVKEAGLWAPHMPKEAGGLGMGMVTLALMNEILGRSPLAPRAFGTGAPDTGNQE 102

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQ 219
           ++ +  TP   + +               P     V     +TE    G+D   + ++  
Sbjct: 103 ILWMFGTPEQKERFLK-------------PNLAGEVYSCFAMTEPEVSGSDPTTLRTRAV 149

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKN 277
           +  D  + ++GHKWF+++   S   I++A  +           ++      G    R   
Sbjct: 150 RDGDH-WVINGHKWFITNAARSAFAIVMAVTDPDAPPHRRATMIIVPTDTPGFRIVRHVP 208

Query: 278 KI---GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGM 328
            +   G       E+ F +    +    N      E  +I         +  A+  +  M
Sbjct: 209 VMDDGGGLGTHD-EIVFEDCRVPV---ENTLGPVGEGFRIAQARLGPGRITHAMRWIGVM 264

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             S    +  A  R   G  L +   ++  +AD   +I AA  L+   A   D+     +
Sbjct: 265 NRSFEMMVRRALTRETRGRKLAEFQTIQNFVADSYAEIQAARLLTLHAAWKMDQGLDARK 324

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E         + K++  ++   V+  A++  G  GY ++  +   YRE+ A  I  G   
Sbjct: 325 E-------ISLIKFFGARVLHEVVDRALQVHGALGYSKDTPLELFYREARAARIYDGPDE 377

Query: 449 AMVLDVLNLLEK 460
              + V   + K
Sbjct: 378 VHRVVVAQRIFK 389


>gi|220912152|ref|YP_002487461.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219859030|gb|ACL39372.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 396

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 105/284 (36%), Gaps = 13/284 (4%)

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLS 236
           + SRE        +         GLTE  GG+D+A    +  ++  D        +W  +
Sbjct: 116 LASREQQEEWLPDIYALKKIGAFGLTEPLGGSDVAGGTRTTARRDGDTWILNGAKRWIGN 175

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
           +  SD  ++ A+             L D +  G    +++NKI  R+    ++   +   
Sbjct: 176 ATFSDWVVIYAKDVADNQVKG---FLVDTALPGFSATKIENKISLRTVQNADIVLEDVVV 232

Query: 297 FLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L  +    +  K+L    L  A  +V     +   A  YA  R   G  L    +
Sbjct: 233 PDFFRLANANSFRDVNKVLKVTRLAVAWQAVGQQLAAFDVARSYAVEREQFGRPLASFQL 292

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +  I  +  ++  +  RLA   D+  ++ E++A A       K +  +     +A 
Sbjct: 293 IQNQLVQILGNAVSSMGMMVRLAQLEDDGLAKDEQSALA-------KAFTTERMRESVAL 345

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               +GG+G + +  +A+ + ++ A     G+     L     +
Sbjct: 346 GRSILGGNGIVTDYGMAKIFADAEAIYSYEGTAEINTLVTGRAI 389


>gi|91786489|ref|YP_547441.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
 gi|91695714|gb|ABE42543.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666]
          Length = 387

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 114/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +      G   ++    +       A +       +     
Sbjct: 25  DEYHRKIDEQRAYPE--AFVDALTKAGWLAALIPGEYGGSGLGLA-EASVIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + +   +    +    + + PKI S E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMGTLLRHGSTAQKELYLPKIASGEWR------------LQSMGVTEPST 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+LA+       +     +   + 
Sbjct: 130 GTDTTKIKTTAIKKGDRYVINGQKVWISRVQHSDWMILLARTTALAEVKKKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      +G+  + + N + N    T EL F N       L+G   +    + D      
Sbjct: 190 DLRQAEKSGMTVRPIPN-MVNH--ETNELFFENLEIPEENLIGQEGLGFKYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      L     Y   R V G  +     ++  IA+  +++ AA  + ++  
Sbjct: 247 TLIAAECIGDGYWFLDRVTKYVGERVVFGRPIGQNQGVQFPIAEAYIEVEAANLMRYKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD  +    EA  A+ +A    +             ++  GG G+  E  + R +RE+
Sbjct: 307 ALFDAGQPCGAEANMAKYLAAKASW-------EAANACIQFHGGFGFANEYDVERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|170767203|ref|ZP_02901656.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
 gi|170123537|gb|EDS92468.1| acyl-CoA dehydrogenase [Escherichia albertii TW07627]
          Length = 388

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 103/316 (32%), Gaps = 30/316 (9%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   +  +  ++       +   W P +                   I   LTE   G+ 
Sbjct: 87  LHHANGLNWRIMYDHGAADLRAKWLPLL-------------ANKDAYINFALTEADCGSG 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268
            A I +   K  D  Y L+G K  +S   +SD   ++A  +        +     + +  
Sbjct: 134 -ADIRTTAVKKGD-KYILNGSKTLISHTDISDGSYVIAVTDENKRKKGGLTAFFIETNTP 191

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G     + + +G R      L F N       ++G          D         A+  +
Sbjct: 192 GYYIDPMPHMMGCRGAGHAYLRFENCEVPAHNIMGKEGDGLDIFMDALAHSRAMIAVTCL 251

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +  L  AI  A+ R   G  L+ +  +++ +AD+   + A   +    A  FD  + 
Sbjct: 252 GMSQRFLELAITRAKDRVTFGKPLVARQSIQQTLADMGTQVHALRVMLRDCAQKFDRGED 311

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSI 442
                    +++ + K         V    +E  GG GY E+     + R YR++ A   
Sbjct: 312 -------IEMVSAMCKLHGIDTVRTVSDGCLEIFGGIGYFEDNPYGPVERMYRDARALWF 364

Query: 443 LLGSGNAMVLDVLNLL 458
             G      L +   L
Sbjct: 365 EEGPRTVQRLTIARPL 380


>gi|240168589|ref|ZP_04747248.1| acyl-CoA dehydrogenase FadE12_3 [Mycobacterium kansasii ATCC 12478]
          Length = 412

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 110/368 (29%), Gaps = 33/368 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQLEAGHLMSPSVT 157
            + RR+   G         F               H      L L   L+    +  +  
Sbjct: 62  EMRRRADQAGWLRYGLPSRFGGRDGTNVDMAVIREHLAHK-GLGLHNDLQNESSIVGNFP 120

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
              M+    T    K+W   + + E              ++  GLTE   G+D   + ++
Sbjct: 121 QVIMMDRFGTEAQKKEWTEALITGE-------------RSMAFGLTEPSHGSDATWLETR 167

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRL 275
            ++  +  + ++G K F +        ++ A+  G  G    +   L      G      
Sbjct: 168 AERDGN-SWVINGAKRFNTGVHRATHDLVFARTSGEPGQARGITAFLVPTDTPGFTVPYY 226

Query: 276 KNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              + N      E+   +       +LG+++      +       +  A  S+   +  +
Sbjct: 227 WWTL-NMPTDHGEVALEDVRVSGDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCI 285

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ YA  R V G  L     ++  + ++  +      L +  A+  D           
Sbjct: 286 DRAVDYANERRVFGKPLSVNQAVQWPLVELQTEAQMVRLLVYYAADQLDRNHHME----- 340

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                 +  Y   ++       AM+  GG GY         YR      I  G+    + 
Sbjct: 341 VSDKVAMANYRANRLVCEAADRAMQVFGGMGYSRHEPFEHIYRHHRRYRITEGAEEIQIR 400

Query: 453 DVLNLLEK 460
            V   L K
Sbjct: 401 RVAQRLFK 408


>gi|255318962|ref|ZP_05360187.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262378302|ref|ZP_06071459.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255303979|gb|EET83171.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82]
 gi|262299587|gb|EEY87499.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 399

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             +   + +TE   G+D AAI +   K     Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 124 KGMWAAMAITEPDCGSDSAAIRTTAIKDGTD-YILNGEKIFVTSGQRADSIVVWATLDPK 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F N        L      ++ G
Sbjct: 183 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAAISFINCRVPAENLLGNPDIDIAKG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR---------A 358
                 ++   D+    V+ M V  A A   +  R      +    + +           
Sbjct: 243 FA---GVMETFDNTRPLVAAMAVGCARA---SLERI---KEIFKDQLDQNYATPYLQTSY 293

Query: 359 IA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A     +  +  AA  L+ + A   D  K  S+E       A I K    ++   +  +
Sbjct: 294 LAAQIYRMEAEWEAARLLTLKAAWMADNKKPNSKE-------ASIAKAKAGRIGNEITLK 346

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E  G  GY E+  + +  R+S    I  G+     L +   
Sbjct: 347 CVELAGSVGYGEDELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|163856468|ref|YP_001630766.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163260196|emb|CAP42498.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 388

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H       +DG       + +        +A  +        A       +  ++   + 
Sbjct: 39  HDFHAALANDGWLGIAMPQEYGGAGLGMTEAALMMQTIAASGAGFAGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  T    + W               P+          +TE   G D   ++++ ++ 
Sbjct: 99  VVVFGTDDQRRRWLE-------------PLIAGREKACFAVTEPDAGLDTTKLSTRAERQ 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ ++   ++LA+             +     D     +  + ++ 
Sbjct: 146 GDEYIVHGRKIWISTAQVAHKMLLLARTTPLAEVSKPTQGLSLFYTDLDRERVEVREIE- 204

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G ++  +  L        +   +G+       +        +  A  +V   R +L  
Sbjct: 205 KMGRKAVDSNMLFIDGLRIPVADRIGEEGRGFEYILHGLNPERILIAAEAVGIGRAALDR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A+ YA  R V G  +     ++  +A   + + AA  + F+ A+ +D        A  A+
Sbjct: 265 AVQYAGERTVFGRPIGQNQGIQHPLAQAWMQLEAANLMVFKAASLYDAGLPCGPYANSAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     +  C+ A       +  +GG GY +E  + R  RES    I
Sbjct: 325 YLGAEAGHNACQTA-------VLTLGGMGYAKEYHVERLLRESYIPRI 365


>gi|284032443|ref|YP_003382374.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida
           DSM 17836]
 gi|283811736|gb|ADB33575.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836]
          Length = 404

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/281 (22%), Positives = 104/281 (37%), Gaps = 19/281 (6%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
            V   + +TE   G+D A+I +  ++  D  Y + G K F+++    DA ++ A ++  +
Sbjct: 129 GVWAAMAITEPDCGSDSASIRTTARRDGDH-YVIDGEKIFVTAGGRCDAVVVWATLDRSL 187

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-------VST 306
           G   +   +      GL  +RL +K+G RS+ T  L F N    +   L           
Sbjct: 188 GRAAIKSFVVPKDTPGLTVERLDHKLGIRSSDTATLRFENCRVPVENLLGSPDIDADKGF 247

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADIA 363
             V           A M+V   R SL           V       +  QP    A   + 
Sbjct: 248 AGVMQTFDNTRPLVASMAVGCARASLELTRELLAEAGVEPDYDRAVHLQPAAAAAYLQME 307

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            D  AA  L+ + A   D  +  S +A+ A+  A        + A  +    +E  G  G
Sbjct: 308 ADWEAAYLLTLQAAWMADNGRPNSLQASMAKAKAG-------RAANDITLRCVELAGSLG 360

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           Y E   + +  R+S    I  G+     L V   L   T+ 
Sbjct: 361 YSEHELLEKWARDSKILDIFEGTQQIQQLIVARRLLGKTSA 401


>gi|91978158|ref|YP_570817.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91684614|gb|ABE40916.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 391

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 126/362 (34%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 32  RKLDREMAYP--KAFVDALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGG 88

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   V    +      W PKI S E                  G+TE   GTD 
Sbjct: 89  CHAQMYTMGTVLRHGSDEQKAKWLPKIASGELR------------LQAFGVTEPTSGTDT 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
            ++ +  +K  +G Y ++G K + S +  SD  ++LA+   +         +   L D  
Sbjct: 137 TSLKTFAKKDDNGDYVVNGQKIWTSRAEYSDLMVLLARTTAKDQTAKKTEGLSVFLVDMR 196

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               +GL  + ++  + N +  T E+ F++       L+G+       +        +  
Sbjct: 197 EARGHGLEIRPIRTMM-NHA--TTEVFFTDLKVPKENLIGEEGKGFRYILSGMNAERILI 253

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   +  +A+A +YA+ R V G  +     ++  IA     + AA  +       +
Sbjct: 254 AAECVGDAKWFIAKATNYAKDRVVFGRPIGQNQGIQFPIAKAYAQMRAAELMVKEATRKY 313

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 314 EAGLDCGAEANMAKMLAA-------DASFEAANACIQTHGGFGFAEEYDVERKFRETRLY 366

Query: 441 SI 442
            +
Sbjct: 367 QV 368


>gi|159128355|gb|EDP53470.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 441

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/451 (17%), Positives = 155/451 (34%), Gaps = 38/451 (8%)

Query: 36  AYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMANYNTPQLHAYGPG 90
            +S    L  L + + +  H+  +      L E++LS  A +  +         + +   
Sbjct: 10  PFSEPPYLRGLPSPYYTASHRRFQKACRAFLWEHLLSH-AMDWEKAGTVPEHVFNDFCKH 68

Query: 91  GERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                 +        L +  IHD  G+    WD     +   +  +   A          
Sbjct: 69  NMLLPNLPAPLPVDWLKKLGIHDILGVKVEEWDYLHTGIYCDELARSGLAGPGASLSAGF 128

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              + P       +    +  + + + P + +                   + +TE   G
Sbjct: 129 AFGIPP-------IIKYGSKDLQERFLPDLLTG-------------RKRGCIAITEPEAG 168

Query: 209 TDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GS 266
           +D+A IT+   K  DG  Y ++G K ++++ +   +  +A   G  G   +  +L     
Sbjct: 169 SDVANITTTATKTPDGKYYIINGTKKWITNGIWSDYTTMAVRTGGPGAAGLSVILVPLKG 228

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  +RLK   G  +  T  +E  +     G L+G        +        L  A+ 
Sbjct: 229 YPGVTMRRLKVS-GQITGGTTYIELDDVKVPVGNLIGREGDGMRIIMTNFNHERLTIAVG 287

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                RV+LA A  Y  +R   G  L+DQPV++  +A    ++    A   ++       
Sbjct: 288 VTRQARVALAAAFEYTMKREAFGKTLMDQPVVRHRLAKAGAELETMWAWVEQILYQLCH- 346

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPAN 440
            S+ E       +  + K     +       A+   GG+GY    +   +    R+ P  
Sbjct: 347 LSKEEADQQLGGITALAKAKAAMVLNECAQCAVLLFGGAGYTASGQGELVEAILRDVPGA 406

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471
            I  GS + ++   +  L K   L E+  + 
Sbjct: 407 RIPGGSEDVLLDLAVRQLVKIYQLGEKKLAK 437


>gi|108805190|ref|YP_645127.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108766433|gb|ABG05315.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 402

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 122/371 (32%), Gaps = 30/371 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
            E WD+ +F      LL+     GL    +++ +        A+ +  A L   +   + 
Sbjct: 45  AEHWDRAQFP---FGLLKGLGELGLLGGTYEKRYGGSGMNNVAYGLGVAELARGSGSLST 101

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L   S  + + +  + +    + W P             PM +        LTE   G+
Sbjct: 102 FLHVQSGLAMAAIHELGSEEQKERWLP-------------PMARCEKTGCFALTEPEAGS 148

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D A++ +   +   G       +W  ++  +D  ++ A+ E       V   L +    G
Sbjct: 149 DPASMRTTASRAPGGYVLEGEKRWIGNASFADVAVVWAKGEDGR----VRGFLVEKGAEG 204

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327
              + +  K   R+     +     F      L ++ G    + IL           +  
Sbjct: 205 FEARVIPRKGSQRAVWQAHIRLRRCFVPEENRLPLAEGLGSTLSILTHSRYGVGWDGLGQ 264

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
                  A+ ++ RR   G  +    +++  +  +A  +A    L+  +    D  +   
Sbjct: 265 AADCYERALEHSLRRRQFGHPIAAFQLVQHRLVRMATSLAELRLLAVHMGRLKDAGE--- 321

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                   +  + K      A  + A A E +GG+G + +  +  H  +        G+ 
Sbjct: 322 ----LDPPLVSMFKMSSLSKAREIAALARETLGGNGILLDHRVMEHMADIEGAYTYEGTD 377

Query: 448 NAMVLDVLNLL 458
           +   L V   +
Sbjct: 378 DINALIVGQAI 388


>gi|56421315|ref|YP_148633.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
 gi|56381157|dbj|BAD77065.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426]
          Length = 404

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 114/335 (34%), Gaps = 36/335 (10%)

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA             +         +    TP   + +       E              
Sbjct: 85  AAEELAWGCPGIALSLPGPGLGGPPIQSSGTPEQKRRFLSIFTKEEPR------------ 132

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
                LTE   G+D + I +  +K+ DG Y L+G K F+++   +   ++ A V+ ++G 
Sbjct: 133 WGAYALTEPEAGSDASGIRTTAKKV-DGGYVLNGQKIFITNGARASWVVVFATVDPKLGR 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--------- 306
                 + +    G    R  +K+G R+N T EL F + F      L             
Sbjct: 192 AGHRAFVVEKGTPGFVATRTVHKMGLRANETAELLFEDCFVPDENLLGGEELYSANANKP 251

Query: 307 -GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK         A M+V   R +    +   R  +   G L  +     A A+  
Sbjct: 252 SGFQVAMKTFDSTRPIVAAMAVGIARAAYEYTLDIVRSEYPKQGRLYYEAAALLAEAEQ- 310

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L++  A   D  +  + EAA       + K    KMA  V A  +E +G  G
Sbjct: 311 -EIDAARLLTWEAAWKADIGEPNAMEAA-------VCKAVAGKMALHVCAMCLELLGPVG 362

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    + + YR+     I  G+     L     L
Sbjct: 363 -LGGHLVEKLYRDVKVFDIFEGTQQIQRLVTARRL 396


>gi|145223029|ref|YP_001133707.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315443485|ref|YP_004076364.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145215515|gb|ABP44919.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315261788|gb|ADT98529.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 395

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 111/312 (35%), Gaps = 35/312 (11%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            M    A HL   S+     V    +  +     P+I   +               +  G
Sbjct: 85  AMNGASAIHL---SIFGMQPVVKHGSDELKAATLPRIVDGDLH-------------VCFG 128

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE--------GRV 253
           +TE   G D + IT+  ++  D         W   +  S+  ++L + E        G  
Sbjct: 129 VTEPGAGLDTSRITTFAKREGDHYRVNGRKVWISKALESEKILLLTRTETPEDLKQRGAK 188

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVE 310
               +   L D   + +  + +  K+G  + ++ EL   +    +   +G+       + 
Sbjct: 189 KTDGMTLFLTDLDRDHVDIRPI-RKMGRNAVSSNELFIDDLMVPVEHRVGEEGQGFKYIL 247

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           D      +  A  ++   RV+L +A+ Y   R V    +     ++  +AD    + AA 
Sbjct: 248 DGLNPERMLIAAEALGIGRVALEKAVKYGNERVVFNRPIGMNQGLQFPLADSLARLDAAE 307

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
            +  +    +D  K    EA  A+ +       C          A++  GG GY EE  +
Sbjct: 308 LVLRKATWLYDNGKPCGREANTAKYL-------CADAGFGAADRALQLHGGMGYSEEYHV 360

Query: 431 ARHYRESPANSI 442
           +R++RES    I
Sbjct: 361 SRYFRESRLMKI 372


>gi|218661251|ref|ZP_03517181.1| putative acyl CoA-like DNA repair protein [Rhizobium etli IE4771]
          Length = 168

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 93/159 (58%), Positives = 121/159 (76%)

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +YWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P N+I  GSGN M LDVL +L +
Sbjct: 6   QYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNR 65

Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
           G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G AR L E++ALA+ AA LYR 
Sbjct: 66  GKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEGAARLLVEQLALAAGAAELYRL 125

Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559
           G   IAD F+E R      ST+ ML  RF+A++I+D LY
Sbjct: 126 GAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLY 164


>gi|254427852|ref|ZP_05041559.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196194021|gb|EDX88980.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 401

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 20/276 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +  ++  D  Y L+G K F++S   +D  ++ A ++ +
Sbjct: 126 KGKWAAMAITEPGCGSDSAAIRTTAKEDGDH-YILNGEKIFVTSGERADCVVVWASLDPK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
           +G   +   + D    G+   RL+ K+G R++ T  + F +        L    + T   
Sbjct: 185 LGRAAIKSFVVDWGTPGMELARLEKKLGIRASDTAAINFVDCRVPAENLLGSPEIDTKKG 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR------RHVSGGILIDQPVMKRAIADI 362
               ++   D+    V+ M +  A+A +   +        +  G  + +   ++  I  +
Sbjct: 245 FAG-VMETFDNTRPLVAAMAIGCAKASLERIKELLKDSISYDYGKPVDNCSAVEAEIYKM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ + A   D  K+ + E       A I+K    ++   +    +E  G  
Sbjct: 304 EADWEAAYWLAVKAAWMADNKKANTLE-------ASISKAKAGRVGNYITLRCVELAGSL 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+     L +   +
Sbjct: 357 GYTEDELLEKWARDSKILDIFEGTQQIQQLVIARRV 392


>gi|21218860|ref|NP_624639.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|5881869|emb|CAB55669.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 389

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 139/427 (32%), Gaps = 52/427 (12%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           Y  +  L  L+    + +  EL                  A+  TP+         + D+
Sbjct: 9   YDDNPRLEELVGRLRAYLTDELLPY-------------ERAHGITPE--------SKLDR 47

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
                 W     RS   G +                          +  L+     S + 
Sbjct: 48  ATLESVWK----RSAELGFYGISLPPELGGQGLS---------FTELCALKEELTSSGAA 94

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            S S++  M  P +      K  + E       P+ +   A    LTE+  G+D+  + +
Sbjct: 95  LSHSVLGDMGGP-LRVGAIVKYATDEQRERYLLPVVRGERACCFSLTEQDAGSDVRRMRT 153

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                 D  Y L+GHK F S+ P +D  +++A++      +     L D    G     L
Sbjct: 154 TATPDGD-SYVLNGHKVFSSAAPFADFAVVVARMADSEETY--SAFLVDLDTPGCRV--L 208

Query: 276 KNKIGNRSNAT-VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +         +L F +       LLG++            L  L      +   R +
Sbjct: 209 DGAVPMSGQQMEGDLVFEDCRVPVANLLGEIGQGLRIGIGRITLNRLLHCPSLIGAARRA 268

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              ++ +A+ R   G  L+    ++  +AD+A D+ AA ++    A   D  ++ + EA 
Sbjct: 269 WDLSVDHAKTRVAFGQPLLALQAIQHKLADMATDLYAARSMVQATAAKADRGENIAVEAN 328

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +  +       +A++  G  G      + + +R      I+ G+     
Sbjct: 329 M-------CKLFTAEACFRTADQAVQIHGKDGLTRGHEVEQIFRSLRMFRIVTGTTEIHK 381

Query: 452 LDVLNLL 458
             ++  L
Sbjct: 382 NAIVKAL 388


>gi|296534094|ref|ZP_06896601.1| possible butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC
           49957]
 gi|296265590|gb|EFH11708.1| possible butyryl-CoA dehydrogenase [Roseomonas cervicalis ATCC
           49957]
          Length = 388

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 137/387 (35%), Gaps = 43/387 (11%)

Query: 67  SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126
           +   +E+A++           G    + D+V  +P     ++     G   ++    F  
Sbjct: 11  AEIREEVAKLCARFP------GEYWRKLDEVRGYPT--EFVQALTQAGWLAALIPEEFGG 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                +    A    +  Q   G      +     +    + R  +++ PKI S E    
Sbjct: 63  SGLPLS-AAAAILEEIQRQGCNGAACHAQMYIMGTILRHGSDRQKQEYLPKIASGELR-- 119

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIM 245
                         G+TE   GTD  ++ +  +K  D  Y ++G K + S +  SD  ++
Sbjct: 120 ----------LQAFGVTEPTSGTDTTSLRTFAKKEGD-KYIVNGQKIWTSRAEHSDLMLL 168

Query: 246 LAQVEGR----VGCFLVPRLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           LA+   R         +   + D       GL  + ++  + N    + E+ F N     
Sbjct: 169 LARTTPRDQVAKKTEGLSTFIVDMRTVLGKGLTIRPIRTMM-NH--NSCEVFFDNMEVPA 225

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G        + D      L  A   +   +  + +A+ YA+ R + G  +     +
Sbjct: 226 ENLVGVEGKGFRYILDGMNAERLLIAAECIGDAKWFIEKAVGYAKERVLFGRPIGQNQGV 285

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA     + AA A+  +    F+   +  EEA   +++A            A     
Sbjct: 286 QFPIARAYAQMRAAEAIVQKGLAKFEAGVNPGEEANMGKMLAAEAS-------WAAAEAC 338

Query: 416 MECIGGSGYIEERSIARHYRESPANSI 442
           ++  GG G+ EE  + R +RE+    +
Sbjct: 339 VQTHGGFGFAEEYDVERKFRETRLYQV 365


>gi|219847054|ref|YP_002461487.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541313|gb|ACL23051.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM
           9485]
          Length = 442

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 125/368 (33%), Gaps = 28/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF         R I +      +       V      +  AR+             
Sbjct: 93  WERGEFPHEIVPGFARLIAETFGSRPYAIDALGPVLTGVACMEMARVD---PSIYTFFGV 149

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                   + L  +P   + W P             PMQ+  +     LTE   G+  AA
Sbjct: 150 HWGLCMGSIDLFGSPEQKQRWLP-------------PMQRFELIGSWALTEPDVGSATAA 196

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  +            KW  ++P++D  I+ A+    V    V   + + +  G   
Sbjct: 197 GLQTTARFERGHWVLNGAKKWSGNAPIADINIIWAR---DVSNNQVQGFIVERNTPGYEV 253

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           +RL+ KI  R+     +   N        L    G     + L       A         
Sbjct: 254 ERLEGKIALRTVQNANIRLVNCRIPEANRLPNVGGFRGVARQLAITRAAVAWAMTGVAMG 313

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +  +A+ YA++R   G  +    +++ ++  +  ++ A   +  R++         +   
Sbjct: 314 AYEQALTYAQQRIQFGRPIGSFQLVQNSLVQMLANVTAMQTMCLRMSQIA------ARTG 367

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             ++  A + K +C +     +A A   +GG+G + E  +AR++ ++ A     G+    
Sbjct: 368 KISQEQASLAKVFCGEKMRETVALARAVLGGNGILLEHGVARYFADAEALYSYEGTHEMN 427

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 428 TLIVGRAI 435


>gi|108798574|ref|YP_638771.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867673|ref|YP_937625.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108768993|gb|ABG07715.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693762|gb|ABL90835.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 467

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 124/346 (35%), Gaps = 30/346 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ ++   G+        FE +   ++    A     +A  + G  +          AL
Sbjct: 143 DLIAKAAELGITAVNIPEDFEGIAEHRSTITNALVAEALAYGDMGLALPILAPGGVAAAL 202

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + P  F+ E  P              + + E R   D  A+ +   +  
Sbjct: 203 THWGSADQQATYLPA-FAGENVPQ-----------ACVAIAEPRPLFDPTALKTTAVRTP 250

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G           ++  ++ FI+ AQ++G+   F+V     + +  GL        +G R
Sbjct: 251 GGYRLTGTKSLVPAAADAEVFIVAAQLDGKPALFIV-----ESASKGLTVTP-DPSMGVR 304

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHYA 339
           + A   +E  N    L   L       ED +    L  L  A ++V      L   + Y 
Sbjct: 305 AAALGRVELDNVAVPLGNRLGEDGATDEDYREAIALSRLGWAALAVGTSHAVLDYVVPYV 364

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ +   
Sbjct: 365 KEREAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPYAREAALAKRL--- 421

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                      +  + ++ +GG GY +E  + R YR+     +  G
Sbjct: 422 ----GTDKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRVIGVAEG 463


>gi|260759100|ref|ZP_05871448.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
 gi|260669418|gb|EEX56358.1| isovaleryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292]
          Length = 288

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 21/291 (7%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L    + L               P     D+    P    L R     G+        + 
Sbjct: 15  LGEEIEALRDTVRRFAE--SRIAPLAAETDRNNQFPMH--LWREFGELGVLGITAPEDYG 70

Query: 126 PVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
                  AH I    +   +        + S    + +    +P     + PK+ S E+ 
Sbjct: 71  GAGMGYLAHCIAMEEISRASASIGLSYGAHSNLCVNQITRNGSPEQRAKYLPKLISGEH- 129

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          L ++E   G+D+ ++    +K  D         W  + P +D  +
Sbjct: 130 ------------VGALAMSEPGAGSDVVSMKLAAEKRGDRYVLNGNKMWITNGPDADVLV 177

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           + A+ +   G   +   + +    G    +  +K+G R + T EL F +        L  
Sbjct: 178 VYAKTDLSAGPRGISAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDCEVPAENLLGT 237

Query: 305 STGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQ 352
               V  +   +  +  +++   +  M   L   + Y   R      + + 
Sbjct: 238 EGKGVNVLMSGLDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQPIGEF 288


>gi|126737980|ref|ZP_01753710.1| putative acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126721373|gb|EBA18077.1| putative acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 383

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 113/375 (30%), Gaps = 44/375 (11%)

Query: 89  PGGERWDKVEFHPAWHA-----------LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
               R    +F P +H             ++     G   ++    +             
Sbjct: 9   RDAVRALCAKFPPEYHREIDAQRGYPEAFVKALTEAGWLSAMIPEEYGGSGLGLTEASII 68

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
                 A           + +   +    +    + + P+I S E               
Sbjct: 69  MEEINRAGGN-SGACHGQMYNMGTLLRHGSIEQKQRFLPRIASGELR------------L 115

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RV 253
             +G+TE   GTD   I +  ++  D         W      SD  I+LA+       + 
Sbjct: 116 QSMGVTEPATGTDTTRIKTTARRNGDRYIVNGQKVWISRVQHSDLMILLARTTPFDQVKK 175

Query: 254 GCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
               +   L D      NGL    + N + N    T EL F N       L+G   +   
Sbjct: 176 KSLGMSVFLVDLKEAIGNGLDVNPIPN-MVNH--ETNELFFDNLEIPAENLIGKEGMGFR 232

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + D         A   +        +   Y + R V G  +     ++  IA+  +++ 
Sbjct: 233 YILDGLNAERTLIAAECIGDGFWFTDKVCAYVKEREVFGRPIGQNQGVQFPIAEAKIELE 292

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + FR    FD  +    EA  A+ +A    +             ++  GG G+  E
Sbjct: 293 AANLMRFRACQLFDRGQPCGTEANMAKYLAAKASW-------EAANACLQFHGGFGFANE 345

Query: 428 RSIARHYRESPANSI 442
             + R +RE+    +
Sbjct: 346 YDVERKFRETRLYQV 360


>gi|312212046|emb|CBX92130.1| similar to acyl-CoA dehydrogenase domain protein [Leptosphaeria
           maculans]
          Length = 438

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 140/371 (37%), Gaps = 43/371 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+    P           DG        +F          I  A + +    E+G  
Sbjct: 68  QERDEQGKDP--KDFHAALAKDGWLGIALPEAFGGSGL----GISEATMMMQTIAESGAG 121

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   T +  ++  PKI S E                  G+TE 
Sbjct: 122 MAGAQAIHANVYATQPLAKFGTEKQLQETIPKIISGEIR-------------TCFGVTEP 168

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---------VGC 255
             G D   +++Q +K+ DG Y ++G K +++ + ++D  I+LA+   R         +  
Sbjct: 169 NAGLDTLRLSTQAKKLDDGTYTVTGQKIWITCAQVADRMILLARTAAREEAETPSKALSM 228

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
           F +P    D S  GL  +R+K K+G R+    E+ F N       L+G        +   
Sbjct: 229 FCIP---IDRSAPGLDMRRIK-KMGGRAVDANEVFFDNYKVPADCLVGKEGEGFKIILHG 284

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A  ++     +LA+A  YAR R V    +     +   +AD  + + AA   
Sbjct: 285 MNAERCLLAGEALGLGYAALAKASSYARERVVFQRPIGMNQGVAHPLADAYMRLEAAKLA 344

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++  A  +D +K+       A  +A    KY   + A      A+   GG GY +E  + 
Sbjct: 345 TYHAARLYDASKTDDTIRQDAIGVAANSAKYLAAEAAFTACERAILAHGGMGYAQEYDVE 404

Query: 432 RHYRESPANSI 442
           R +RE     I
Sbjct: 405 RWFRECLVPRI 415


>gi|316935221|ref|YP_004110203.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602935|gb|ADU45470.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 390

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 126/362 (34%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 31  RKLDREMAYP--KAFVDALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGG 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      W PKI S E                  G+TE   GTD 
Sbjct: 88  CHAQMYTMGTLLRHGSDEQKAKWLPKIASGELR------------LQAFGVTEPTSGTDT 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
            ++ +  +K + G Y ++G K + S +  SD  I+LA+   +         +   L D  
Sbjct: 136 TSLKTFAKKDAGGDYVVNGQKIWTSRAEYSDLMILLARTTPKDQVTKKTEGLSVFLVDMR 195

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               +GL  + ++  + N +  T E+ F++       L+G+       +        +  
Sbjct: 196 EARGHGLEIRPIRTMM-NHA--TTEVFFTDMKVPKENLIGEEGKGFRYILSGMNAERILI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   +  +A+A  YA+ R V G  +     ++  IA    ++ AA  +       +
Sbjct: 253 ASECVGDAKWFIAKASAYAKDRTVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEATRKY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 313 EAGMDCGAEANMAKMLAA-------DASFEAANACIQTHGGFGFAEEYDVERKFRETRLY 365

Query: 441 SI 442
            +
Sbjct: 366 QV 367


>gi|302898864|ref|XP_003047932.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728864|gb|EEU42219.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 438

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 129/362 (35%), Gaps = 25/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P           DG        S           I  A + +    E+G  
Sbjct: 68  QEHDQEEKDP--KEFHAALAKDGWLGIALPESLGGSGL----GISEATMMMQTITESGAG 121

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           M+ +  S       T P        K  S+E   T    +      +  G+TE   G D 
Sbjct: 122 MAGA-QSIHANVYATQP------LAKFGSQEQLETTVPNIVSGKWRVCFGVTEPNAGLDT 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLED-- 264
             + +  +K SDG Y ++G K +++ + ++   I+LA+       +     +     D  
Sbjct: 175 LRLGTTAKKNSDGSYSVTGQKIWITCAQVASKMILLARTTPLEEVKKPSEGLSLFSIDLN 234

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL  +++K K+G R+    E+ F N       L+G+       +           A
Sbjct: 235 RDQPGLDLRKIK-KMGGRAVDANEVFFDNYQIPANSLIGEEGKGFKMILHGMNAERCLLA 293

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     +L +A  YAR R V    +     +   +AD  + +  A   ++  A  +D
Sbjct: 294 GEALGLGYAALKKASEYARERVVFKRQIGMNQAIAHPLADAYMKLEGAKLATYHAARLYD 353

Query: 382 EAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++K+ S        + A   KY   + A      A+   GG GY  E  + R +RE    
Sbjct: 354 QSKTDSSIRQDEVGVAANSAKYMAAEAAFTACERAVLTHGGMGYAMEYDVERWFRECLVP 413

Query: 441 SI 442
            I
Sbjct: 414 RI 415


>gi|158523113|ref|YP_001530983.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511939|gb|ABW68906.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 364

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 136/360 (37%), Gaps = 39/360 (10%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+    PA    + ++   G   S+    +       +    A  L  +A  +  
Sbjct: 28  TAHDMDESGQIPA--DAIDKAWGLGASISMVPEEYGGYGMADSPLETALVLEELAFGDMA 85

Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             ++ +  S   + VA M T    K + P     EY             A  + L E R 
Sbjct: 86  FAVAVTAPSLFITPVAKMGTEDQKKKYLPLFCKEEY------------AACTMALNEPRF 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G D   + +  +K   G Y L+G K F+     +   ++ A ++G+   F+V     D  
Sbjct: 134 GFDAVDLKTTAEKKG-GAYVLNGEKCFVPMGANASHMLVAANLDGKSQLFIV-----DTK 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G+     +  +G  +     + F N        L    G   D     +L  + + ++
Sbjct: 188 NPGVKMGDREKTLGMYALEMNRVVFENCEVPAEDRLGGEEGCDFD----AFLQRSRVGMA 243

Query: 327 GMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M   +  A       YA+ R   G  +  +  +   +A++A ++ +   ++++ A++ +
Sbjct: 244 AMAAGVTNASYLFAREYAKTRVQFGQPIAYRQSVAFMLAEMAYEVDSIRLMAWKAASALE 303

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K+ + EA  A++       +  +MA  +    ++ +GG GYI E  + R+YR +   S
Sbjct: 304 AGKNATREAYLAKM-------YAGEMAMKMCDYGVQLMGGHGYIREYPVERYYRNARGFS 356


>gi|309811098|ref|ZP_07704896.1| acyl-CoA dehydrogenase family protein [Dermacoccus sp. Ellin185]
 gi|308435062|gb|EFP58896.1| acyl-CoA dehydrogenase family protein [Dermacoccus sp. Ellin185]
          Length = 427

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
            +    + +TE   G+D   I +   K  D  Y L+G K F++S   ++  ++ A +E  
Sbjct: 151 GNRWAAMAITEPDTGSDSGNIRTTATKDGDE-YVLNGEKIFVTSGERAELVVVWATLERS 209

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
           +G   +   + + S  GL   RL++K+G R++ T      +       LLGD  + T   
Sbjct: 210 LGKKAIKSFVVERSNPGLKLVRLEHKLGIRASDTAAFVLEDCRVPANDLLGDPKIRTEGG 269

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAI----HYARRRHVSGG----ILIDQPVMKRAIAD 361
                +   D+    V+ M V L  A       A  +   G      +  Q      +  
Sbjct: 270 FGG-AMQTFDNTRPLVAAMAVGLTRACLDFTRTALEKAGHGQDWDAPVAAQTYASARLVQ 328

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  +A  L+ R A   D  K  S EA+ A+  A        +    V  + +E +G 
Sbjct: 329 MEADYESALLLTLRAAWMADNGKPNSMEASMAKAKAG-------RTCVNVALQCVELVGV 381

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY E   + +  R++    I  G+    +L V   L
Sbjct: 382 DGYAESELLEKWARDAKILDIFEGTQQIQLLVVARRL 418


>gi|149048720|gb|EDM01261.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_a
           [Rattus norvegicus]
          Length = 378

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 113/316 (35%), Gaps = 45/316 (14%)

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI 316
           +   + +    G+   + ++K+G R + T E+ F NT   +   L  V  G    M I  
Sbjct: 1   MTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI-- 58

Query: 317 YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L+S   S+           + +   YA  R      L +  +++   A +A       +
Sbjct: 59  -LNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMES 117

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           +++  +   D+            I A + K +  + A   ++EA++ +GGSGY+++    
Sbjct: 118 MAYLTSGMLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYE 172

Query: 432 RHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
           R  R++    I  G+   + L +    L   G  L  ++      ++ +  + +   LRD
Sbjct: 173 RMLRDARILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRD 232

Query: 490 SISL---------------------CKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528
           S+                        +E+        E +        L R G   + + 
Sbjct: 233 SLGRTVDLGLSSNIAVVHPSLGHYKLEENVHYFGRTVETL--------LLRFGKTIVEEQ 284

Query: 529 FLENRFLDNCHSTHCM 544
            +  R  +   + + M
Sbjct: 285 LVLKRVANILINLYGM 300


>gi|302784406|ref|XP_002973975.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
 gi|300158307|gb|EFJ24930.1| hypothetical protein SELMODRAFT_100571 [Selaginella moellendorffii]
          Length = 415

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 119/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++ +     +          P +      I AA +  +    +  ++ 
Sbjct: 64  WEKAEFP---FEIVPKMASLKIAGGTIQGYGCPGLSILGSAIAAAEVARVDASCSTFILV 120

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A+  + +  + + P++              K        LTE   G+D ++
Sbjct: 121 HSSLAMLTIAMCGSEQQKQKYLPQL-------------AKLDTIACWALTEPDYGSDASS 167

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +++   K   G       +W  +S  +D  ++ A+             +      G    
Sbjct: 168 LSTTATKAKGGWVLNGQKRWIGNSTFADVAVIFARNTETNQING---FIVRKGTPGYRAT 224

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++   + F      L       +  K+L    +  A   +      
Sbjct: 225 KIENKIGLRIVQNGDIVLKDAFIPDDDRLPGINSFADTNKVLAISRIMVAWQPIGVTMGV 284

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R   G  L    + +  +  +  +I A   + +RL   +D  K       
Sbjct: 285 YDMCHRYLLERKQFGAPLASLQINQEKLVQMLGNIQAMALVGWRLCKLYDSGK------- 337

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W  K A   +A   E +GG+G + +  +A+ + +        G+     
Sbjct: 338 MTPGQASLAKCWNTKRARETVALGRELLGGNGILVDFLVAKAFCDLEPIYTYEGTYEVNA 397

Query: 452 LDVLN 456
           L    
Sbjct: 398 LVTGR 402


>gi|256790140|ref|ZP_05528571.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289774018|ref|ZP_06533396.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289704217|gb|EFD71646.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 389

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 139/427 (32%), Gaps = 52/427 (12%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           Y  +  L  L+    + +  EL                  A+  TP+         + D+
Sbjct: 9   YDDNPRLEELVGRLRAYLTDELLPY-------------ERAHGITPE--------SKLDR 47

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
                 W     RS   G +                    A +  L A   A        
Sbjct: 48  ATLESVWK----RSAELGFYGISLPPELGGQGLSFTELC-ALKEELTASGAAL------- 95

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            S S++  M  P +      K  + E       P+ +   A    LTE+  G+D+  + +
Sbjct: 96  -SHSVLGDMGGP-LRVGAIVKYATDEQRERYLLPVVRGERACCFSLTEQDAGSDVRRMRT 153

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                 D  Y L+GHK F S+ P +D  +++A++      +     L D    G     L
Sbjct: 154 TATPDGD-SYVLNGHKVFSSAAPFADFAVVVARMADSEETY--SAFLVDLDTPGCRV--L 208

Query: 276 KNKIGNRSNAT-VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
              +         +L F +       LLG++            L  L      +   R +
Sbjct: 209 DGAVPMSGQQMEGDLVFEDCRVPVANLLGEIGQGLRIGIGRITLNRLLHCPSLIGAARRA 268

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              ++ +A+ R   G  L+    ++  +AD+A D+ AA ++    A   D  ++ + EA 
Sbjct: 269 WDLSVDHAKTRVAFGQPLLALQAIQHKLADMATDLYAARSMVQATAAKADRGENIAVEAN 328

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                    K +  +       +A++  G  G      + + +R      I+ G+     
Sbjct: 329 M-------CKLFTAEACFRTADQAVQIHGKDGLTRGHEVEQIFRSLRMFRIVTGTTEIHK 381

Query: 452 LDVLNLL 458
             ++  L
Sbjct: 382 NAIVKAL 388


>gi|297529060|ref|YP_003670335.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
 gi|297252312|gb|ADI25758.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3]
          Length = 404

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 114/335 (34%), Gaps = 36/335 (10%)

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AA             +         +    TP   + +       E              
Sbjct: 85  AAEELAWGCPGIALSLPGPGLGGPPIQSSGTPEQKQRFLSIFTKDEPR------------ 132

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
                LTE   G+D + I +  +K+ DG Y L+G K F+++   +   ++ A V+ ++G 
Sbjct: 133 WGAYALTEPEAGSDASGIRTTAKKV-DGGYLLNGQKIFITNGARASWVVVFATVDPKLGR 191

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--------- 306
                 + +    G    R  +K+G R+N T EL F + F      L             
Sbjct: 192 AGHRAFVVEKGTPGFVATRTVHKMGLRANETAELLFEDCFVPDENLLGGEELYSANANKP 251

Query: 307 -GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
            G    MK         A M+V   R +    +   R  +   G L  +     A A+  
Sbjct: 252 SGFQVAMKTFDSTRPIVAAMAVGIARAAYEYTLDIVRSEYPKQGRLYYEAAALLAEAEQ- 310

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
            +I AA  L++  A   D  +  + EAA       + K    KMA  V A  +E +G  G
Sbjct: 311 -EIDAARLLTWEAAWKADIGEPNAMEAA-------VCKAVAGKMALHVCAMCLELLGPVG 362

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +    + + YR+     I  G+     L     L
Sbjct: 363 -LGGHLVEKLYRDVKVFDIFEGTQQIQRLVTARRL 396


>gi|326797307|ref|YP_004315127.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
 gi|326548071|gb|ADZ93291.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1]
          Length = 380

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 102/320 (31%), Gaps = 29/320 (9%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           L A        S        +    +  +     P + +                     
Sbjct: 84  LFAGAAHTFACSM------PILEHGSETLKHQLLPDLATG-------------RKIAANA 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           ++E   G+DI+ + +  QK  D      G  +  +  ++D +++ A    + G       
Sbjct: 125 ISEASAGSDISNLATTAQKEGDYYVLNGGKSYVTNGSIADYYVVYATTNKKHGYLGQTAF 184

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318
           +   +  G+      +K+G RS    ++ F N      + LG                  
Sbjct: 185 VVPRNTPGISVGNDYHKLGLRSAPLNQVFFDNCTIHKDYALGREGQGARIFAASMDWERC 244

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
               + V  M+  L + I YA  R      +     +   IAD+ + + +A  + +  A 
Sbjct: 245 CLFAIFVGAMQRDLNQCIEYANTRMQGDKTISRFQAVSHRIADMGVRLESARLMLYYAAW 304

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
              +    ++  A +++                  +++   G  GY++E  +    +++ 
Sbjct: 305 QKSQDVDNTKAVAMSKLAISEAFVQSG-------IDSIRVHGALGYLDEGRVNNSIKDAL 357

Query: 439 ANSILLGSGNAMVLDVLNLL 458
            + +  G+ +     + N L
Sbjct: 358 GSVLFSGTSDIQRELICNRL 377


>gi|300785761|ref|YP_003766052.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299795275|gb|ADJ45650.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 383

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 129/401 (32%), Gaps = 29/401 (7%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           ++ L+   Q L   A     ++       + WD+    P    L       G     +  
Sbjct: 2   DFALTDEQQLLRETARQFVAKVCP-AEKAKEWDEGSIVP--PELFSGMAELGWFSLPFAV 58

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                       I  A     A  +        +     V    T         ++ +  
Sbjct: 59  DEGGDGGGPVELIVLAEELGRASFDVAMCYIGVLIPGITVFRWGTEAQRDFIRDEVMTGR 118

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
           +              + +GL+E   G+D AA+ +  +   D         W   + +   
Sbjct: 119 HR-------------LAVGLSEPDSGSDAAALRTTAEDAGDHFVVRGQKAWCTGAGLPGT 165

Query: 243 FI-MLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
            I    +   R      +  LL D S  G+  +R    +      T E+ F +       
Sbjct: 166 TIATYVRTGPREPKHSGISLLLIDPSSPGVEVRRTPT-LARHILGTNEVFFGDVAVPKEN 224

Query: 301 DLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
            +       + M   I L+  I++   +   + +L E + +AR R   G  +     +  
Sbjct: 225 LVGPVDEGWKVMLSNIELEKVIITGGYLGAAQATLDEMLEFARTRQAFGRPVGTFQAIAH 284

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
           AIAD+  +I +A  L++R A    + K  S E + A++    T     ++   V A    
Sbjct: 285 AIADLQTEIDSARLLAYRAAWLLAQGKPCSREGSMAKLKGSETYVAAARLGMQVCA---- 340

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              G G+  E  ++  YRES   +I  G+       +   +
Sbjct: 341 ---GHGFSTESVMSFRYRESIVATISGGTSQIQRNGIARSM 378


>gi|319764415|ref|YP_004128352.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           BC]
 gi|330826636|ref|YP_004389939.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
 gi|317118976|gb|ADV01465.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           BC]
 gi|329312008|gb|AEB86423.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans
           K601]
          Length = 385

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 120/366 (32%), Gaps = 28/366 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL+R     G  C      F  +                A L   +L   S  +  +++
Sbjct: 41  RALMREMGELGFLCPELPEQFGGLGLGCLAAGVIHEEIARADLSCSYLNLLSSLNGQILS 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P V   W  K+ S E                 + LTE RGG+D A +  + ++  D
Sbjct: 101 RYGDPGVVGPWLRKLVSGE-------------ALCAIALTEPRGGSDAANLRLRVERSGD 147

Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             Y ++G K  +S+   +D  ++  +      G   V  LL      G+   R  +  G 
Sbjct: 148 -SYVINGEKTSISAADQADIAVVFGRTGRPEDGAHGVTALLVPMDTPGITTNRF-DCHGQ 205

Query: 282 RSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+     + F N        LGD N     V            +  ++  R +L E   Y
Sbjct: 206 RAIGRGSIFFENVRVPANHRLGDENKGFVQVMQGFDYSRSLIGLSCLAVARAALEETWQY 265

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
             +R   G  L     +   +A    ++  A  L  +     D+    S EA  A+    
Sbjct: 266 ITQREAFGQPLSAFQGVTHPLAAFDTEVEGARLLCLQGLWLKDKGLPHSAEAGMAKW--- 322

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               W  K+A  VI + +   G  GY     + +  R+     +  G+   M   +    
Sbjct: 323 ----WGPKLAYDVIHQCLLSFGHGGYDRG-PMEQRLRDVLGYQLGDGTAQIMKTIIARTR 377

Query: 459 EKGTNL 464
               N+
Sbjct: 378 AGRRNV 383


>gi|296411505|ref|XP_002835471.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629255|emb|CAZ79628.1| unnamed protein product [Tuber melanosporum]
          Length = 426

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 100/294 (34%), Gaps = 17/294 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKW 233
           +  ++E        M K  +    GLTE   G+D  ++ +  +                W
Sbjct: 141 EFGTQEQKERFLPGMAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKKGVCLLFGSKTW 200

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +SP++D  ++ A+++ ++  FLV R     +P  L    +K+K G R++ T  +    
Sbjct: 201 ITNSPIADVLMVWAKLDCKIRGFLVER--ATAAPGTLSTPAIKDKTGLRASITGMIMLDG 258

Query: 294 TFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGIL 349
                     D++   GP   +        A  ++  +   +  A  YA  R    G  L
Sbjct: 259 VEVPEENMFADVDGLRGPFSCLNN-ARYGIAWGTMGALEDCITRARIYALERKQFKGNPL 317

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               ++++ +AD   D A   A    +    D+          A  M  + K   C  A 
Sbjct: 318 AKYQLVQKKLADATTDAAFGLAACLHVGRLKDKGLC-------APEMISMIKRQNCDRAL 370

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           A      E  GG+   +E    RH           G  +   L +   +     
Sbjct: 371 ANARILQEIFGGNAVSDEYGTGRHVANLFVTQTYEGQSDIHSLILGRAITGAQA 424


>gi|262194888|ref|YP_003266097.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
 gi|262078235|gb|ACY14204.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM
           14365]
          Length = 392

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 143/425 (33%), Gaps = 57/425 (13%)

Query: 53  VVHKELELLGEYVLSCTAQELARMAN---YNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
            +  EL+ L E       +   R       N P+   +GP     D+         L+  
Sbjct: 4   SLSPELQALRER-----TRAFIRDVVMPYENDPRQGPHGPAEALRDE---------LVAA 49

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTT 167
           +   GL      R    +    A K         + L   A ++ +P   +  ++  + +
Sbjct: 50  ARDAGLLTPHASRELGGLGLDHAAKAVVFEEAGYSPLGPIALNIHAPDEGNVHLLERVAS 109

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGI 225
           P   + W               P+    V     +TE     G+D + + +   +  +  
Sbjct: 110 PAQSERWL-------------RPLVAGRVRSCFAMTEPAPGAGSDPSMLQTTATRDGEH- 155

Query: 226 YCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
           Y ++G KWF++      F I++A++E           L D    G+  +R  +     S 
Sbjct: 156 YRINGCKWFITGAEGAGFAIIMARMEDGSA----SMFLADMDQPGIAIERQMD-----SL 206

Query: 285 ATV------ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            T        L F +       +LG++       +       L   +  +   R +   A
Sbjct: 207 DTCFTGGHAVLRFDDVRVPAADVLGEIGEGFRYAQVRLAPARLTHCMRWLGQARRAHEVA 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R   G  L +   +   +AD  +D+ AA  + +  A   D+A          + 
Sbjct: 267 LRYASEREAFGKPLAEHEGVGFMLADNEIDLHAARLMIWHAAWVLDQAGENPRAG---KH 323

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              + K    +    V+  +++ +GG G   E  +AR +R+  A  I  G        + 
Sbjct: 324 ETSMAKVSVSEAVWQVVDRSVQILGGQGVTGETVVARIFRDIRAFRIYDGPSEVHRWSIA 383

Query: 456 NLLEK 460
             L +
Sbjct: 384 RRLVR 388


>gi|85372834|ref|YP_456896.1| acyl-CoA dehydrogenase, putative [Erythrobacter litoralis HTCC2594]
 gi|84785917|gb|ABC62099.1| acyl-CoA dehydrogenase, putative [Erythrobacter litoralis HTCC2594]
          Length = 550

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 147/429 (34%), Gaps = 46/429 (10%)

Query: 50  FPSVVHKELELLGEYVLSCTAQEL-ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
                  + E  G+  L    ++  A  A+  TP  H +             P    +++
Sbjct: 148 LAEGARPD-EAFGDETLDLIREQFRAFTADKITPHAHQWHMDDALI------PM--EVVQ 198

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
                G+           +   +      +       + AG L + S  +  ++    T 
Sbjct: 199 EMAALGVFGVCIAEKHGGLGLGKTAMCLVSEELSRGWICAGSLGTRSEIAGELIGENGTA 258

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                + P+I      PT                TE   G+D+A++  +G + +DG + +
Sbjct: 259 EQKAKFLPQIADGSILPTAV-------------FTEPDTGSDLASVRMRGVRQADGSWQV 305

Query: 229 SGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPN---------GLCYQRLKN 277
           SG K +++ +  +D   ML + + G  G   +  LL + +           G+    ++ 
Sbjct: 306 SGAKTWITHAARADLMTMLVRTDPGTPGYGGLSMLLAEKTRGTDADPFPDTGIDGSEIE- 364

Query: 278 KIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            +G R      L F        G L G        +        + +A  ++     +  
Sbjct: 365 VLGYRGMKEYALGFDGFAVAADGLLGGAEGQGFKQLMRTFEGARIQTAARAIGVAWNAFD 424

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + YA  R   G  L+  P +   +A +  ++  A  L++  A   D+      EA  A
Sbjct: 425 LGLQYALERKQFGKPLLAFPRVADKLALMVAELVLARELTYSAARHKDKGDRCDIEAGQA 484

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +++A        + A +    A++  GG+GY  E  I+R   ++   +I  G+G      
Sbjct: 485 KLLAA-------RTAWSNADNALQIHGGNGYALEYPISRVLCDARILNIFEGAGEIQAQV 537

Query: 454 VLNLLEKGT 462
           +     K  
Sbjct: 538 IGRGTLKAQ 546


>gi|307296312|ref|ZP_07576139.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878114|gb|EFN09337.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 415

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 141/427 (33%), Gaps = 52/427 (12%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAW 103
            AL+ +    + +E+    E VL   A  L       TP+            +  F  A 
Sbjct: 22  EALLPDESRRIRREVRDFAEAVLKPEAFRL-----NTTPE-----------SREGFPRAM 65

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +      GL+   +         +         L  M  LE     S  + SA   A
Sbjct: 66  FEAM---AAAGLYEIPFPADVGGRGLE------FPTLATMIVLEELGYFSAGIASALFDA 116

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA--ITSQGQKI 221
                      APK   + Y P     + +  +      +E +  TD++A  + +   + 
Sbjct: 117 QALLVGQTLANAPKALRQRYLPR----IVRGEIVGSFATSEPQASTDLSADALRTVATRT 172

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
             G       +W  ++  +D  + L +       F+    L +   NG+       K+GN
Sbjct: 173 QGGWRINGKKRWISNAIAADFILTLCRTGEGEQTFI----LVETHQNGIEVGAPDLKMGN 228

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSVSGMRVSLAEAIHY 338
               T ++ ++  F      +    G ++      +L  +    + V   + +  EA  +
Sbjct: 229 HPQLTSDVTYTGAFAAEDNVVGRVGGGLKAALSALMLGRIGIGAVGVGLAQAAFDEASAH 288

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              RH  G  L      +   AD A+ +  A +L  + A   D   +   EAA A++   
Sbjct: 289 MEERHAFGQPLGRFQHWQFTFADHAILLETARSLYLKAAQLHDIGIAADAEAAMAKVA-- 346

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIE-------ERSIARHYRESPANSILLGSGNAMV 451
                  ++A  V  +A++  G  G+         ER +   YR++    I  G+     
Sbjct: 347 -----GSRLAVDVARDAIQVCGAYGFARYIQGAGSERILEAIYRDAKIGEIYEGANEIQK 401

Query: 452 LDVLNLL 458
             +   +
Sbjct: 402 WILARRI 408


>gi|115360683|ref|YP_777820.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115286011|gb|ABI91486.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 394

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 121/373 (32%), Gaps = 25/373 (6%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G   + V        + RRS   G + +                 +   +     L+A  
Sbjct: 34  GLDSESVWPKDVLRRVWRRSAELGYYSA---------CLPVQLGGKGFSILQQCALKADL 84

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             S    +  ++  +  P    +   K  + +       P+ +   +    LTE   G+D
Sbjct: 85  AASGCSLAMHVLGDLGGPPRVGNML-KYATADQLQRYFMPVIRGEKSTCFALTEPHSGSD 143

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           + +I +      D +  ++GHK ++S  P +D  I++   +       +  +L D    G
Sbjct: 144 VQSIATSAVADGDDL-IVNGHKHYISGAPFADFAIVMCVTDTTTTPPAISAVLIDLDLPG 202

Query: 270 LCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---ILIYLDSAIMSV 325
           +  ++    + G       ++ F N           +    +       +  L      +
Sbjct: 203 VTVEQAYVPMSGQH--IDADIRFENVRVPRTNLFGGAGNGFKLGMSRINVNRLLHCPTML 260

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                    ++ YAR R   GG +     ++  +AD+A  + A  ++  + A   D    
Sbjct: 261 GLATSVYEASLDYARSRRQFGGPIARFQAIQHMLADMAAALWACESMIAQTAMLADAGGD 320

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   R+ A   K +  +    +  +A++  G  G      + + +R+     I  G
Sbjct: 321 -------LRMKAAACKVFVSERCFEIADKAVQIHGNVGVTRHHPVEQAFRKLRMFRIFTG 373

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 374 TSEIQRNTIARAI 386


>gi|94314344|ref|YP_587553.1| putative butyryl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93358196|gb|ABF12284.1| putative short-chain specific (Butyryl-CoA dehydrogenase)
           [Cupriavidus metallidurans CH34]
          Length = 384

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 99  FHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSV 156
             P +           GL    +            H + A   + L+    A  + + + 
Sbjct: 33  HSPHYPWDTAALLAEQGLLGIAFSEEDGGQGGTLMHAVLAIEQIALVCPRSADIVQAGNF 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                     +P     + P + +                 + LG++E   G+ +  + +
Sbjct: 93  GPIRTFVEYASPEQKARYLPDLLAG-------------RKVVSLGMSEPDAGSAVTELKT 139

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             +   D  Y ++G K F +  P ++ F++  +    VG   +  +L +    G      
Sbjct: 140 SARLDGD-SYVINGSKVFSTHSPDAELFLIYVRFGPGVG--GIGSVLVERGTPGFQVGEP 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLA 333
            + +        +L F +    +   L    G  +      +  L ++  +++  R +  
Sbjct: 197 SSFM--NGEQWSQLYFDDCRIPVENVLLGPGGFKKQISGFNVERLGNSSRALALGRHAFN 254

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +A  R   G  L +   ++   AD+A+ +  A  + +R A   +     ++  A A
Sbjct: 255 VAREHAMTRKQFGRELCEFQGIQWKFADMAMKLEQAQMMLYRAALEGEHGLPSAQSTAMA 314

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++   +  +        V  EA++ +GG G+ +E  +    R +    I  GS   +   
Sbjct: 315 KLACNMAGW-------EVSNEALQVMGGMGFSQESLVEYCVRRTRGWMIAGGSIEILKNR 367

Query: 454 VL 455
           V 
Sbjct: 368 VA 369


>gi|221197953|ref|ZP_03570999.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221204489|ref|ZP_03577506.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221175346|gb|EEE07776.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221181885|gb|EEE14286.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 388

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H         G      D ++        +A  +  A     A L     +  ++   + 
Sbjct: 39  HDFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRAISASGAGLSGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  +      + P             P+          +TE   G D   +T+  ++ 
Sbjct: 99  VQVFGSDAQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLTTHARRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ +++  +++A+             +     D   + +  + + +
Sbjct: 146 GDHYVLSGRKIWISTAQVANKMLIIARTTPLEQVAKPTDGLSLFYTDLDRSRVEVREI-D 204

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G ++  +  L   N       L+G        +        +  A  ++   + +L  
Sbjct: 205 KMGRKAVDSNMLFIDNLRVPHDDLIGTEGEGFRYLLHGLNPERILIAAEAIGLGQAALRR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A   + + AA  +  + A  +D  +    EA  A+
Sbjct: 265 ATQYANERVVFGRPIGQNQAIQHPLALAWMQLEAAWLMVMKAATRYDAGQPCGAEANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     +  C+ A A         GG GY +E  + R+ RE     +
Sbjct: 325 YLGAEAAFHACQTAVA-------THGGMGYAKEYHVERYLRECMIPRL 365


>gi|315504250|ref|YP_004083137.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
 gi|315410869|gb|ADU08986.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           sp. L5]
          Length = 657

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 152/433 (35%), Gaps = 59/433 (13%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
            LI  +P     E+    E++ S      A + +    +         R     FH    
Sbjct: 59  DLIDPWPRPDPAEVARADEFLGSLR----AYLTSEVDGEAIERDA---RIPDEVFH---- 107

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
                    G      DR +  +     H  RA  L          L+S   S+     +
Sbjct: 108 ----GLAGLGTFGMKIDRKYGGLGLSNLHYCRALMLVGSVNPAVSALLSAHQSIGVPQPL 163

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  TP   + + P++ + E                   LTE   G+D A + +  +  +
Sbjct: 164 KMFGTPEQKERFLPRLAAGE--------------VSAFLLTEPDVGSDPARLATTAEPTA 209

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K W  +  ++   +++A+V  G      +   + +G  +G+  +R  + +
Sbjct: 210 DGTGYRLNGVKLWATNGTLATLLVVMARVPAGEGRRGGITAFVVEGDSDGITVERRNSFV 269

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-----VSGMRVSLA 333
           G R        F + F       NV  G  + +KI L  L++  +S     V   + +L 
Sbjct: 270 GLRGLENSLTRFHDVFVP---KENVIGGEGKGLKIALTTLNTGRLSLPAMCVGAGKWALN 326

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +A  R   G  + +   + + +A IA       ++        D+ ++        
Sbjct: 327 VAREWAADRVQWGRPVGEHEAVAKKLAFIAATTYGMESMLDLSCMLADDDRNDIR----- 381

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--------ERS--IARHYRESPANSIL 443
            I A + K +  +MA  +  E ++  GG GY          ER   + +  R+   N I 
Sbjct: 382 -IEAALVKLYASEMAWRIADELIQIRGGRGYETADSLAARGERPAAVEQLLRDLRINRIF 440

Query: 444 LGSGNAMVLDVLN 456
            GS   M L +  
Sbjct: 441 EGSTEIMHLLIAR 453


>gi|241764709|ref|ZP_04762720.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241365827|gb|EER60482.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 395

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/370 (18%), Positives = 131/370 (35%), Gaps = 46/370 (12%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL----YLMAQLEAGHLMSPSVTSA 159
             L+ R+   GL      R    +    +H  +A       Y      A ++ +P   + 
Sbjct: 44  RELVARARAAGLLTPHASREMGGLGL--SHVAKAVVFEEAGYSWLGPTALNIHAPDEGNI 101

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQ 217
            ++  + TP   + W               P           +TE     G D + + + 
Sbjct: 102 HLMEEVATPAQKERWL-------------RPQVAGHTRSCFAMTEPSPGAGADPSLLATT 148

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D  Y ++G KWF++    +D  I++A++E           L D S  G+   R  
Sbjct: 149 AVRDGDH-YVINGLKWFITGADGADYAIIMARMEDGSA----TMFLSDMSRPGIVLDRNM 203

Query: 277 NKI-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           + +     G        L F N       +LG++       +       L   +  +   
Sbjct: 204 DAMDACFTGGHG----VLRFDNLRVPAEDVLGEIGKGFRYAQVRLAPARLTHCMRWLGQA 259

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+ YAR+RH  G  L +   +   +AD  +D+  A    +  A   D+ +  + 
Sbjct: 260 RRAHDAALAYARKRHAFGKPLAEHEGVGFMLADNDMDLHTARLHIWHTAWMLDQGEKCNF 319

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E++ A+++    ++        V+  +++ +GG G   E  + R + +  A  I  G   
Sbjct: 320 ESSRAKVVCSEAEW-------RVVDRSVQILGGQGVTGESPVMRIFTDMRAFRIYDGPSE 372

Query: 449 AMVLDVLNLL 458
                +   L
Sbjct: 373 VHRWSMARKL 382


>gi|310800406|gb|EFQ35299.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 435

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 137/392 (34%), Gaps = 36/392 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + W+     P    L  +    GL      R + P        I    + +  +L  
Sbjct: 57  PHAQEWEAAGEAPLAARL--KFAKSGLAFLDVPREYRPEEVMTVAGIPFDDIDVFHELIL 114

Query: 149 GHLMS------------PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
              M+             S   A  + +  T    + W P +F+ E              
Sbjct: 115 MDEMARIPSGVPLALAGASNVGAPPIFVAGTTEQKRRWLPGLFTWE-------------T 161

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           +  L +TE   G+D++AI +  +K  DG  Y ++G K +++       +  A   G  G 
Sbjct: 162 SFCLAITEPTAGSDVSAIRTTAKKTPDGAHYVVNGRKKWITGAPWATHMTTAVRMGEKGQ 221

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             +  L+   + +G+  +++ N  G+ +  +  +   +       LLG  N     +   
Sbjct: 222 GGISLLVVPLTLSGITIRKIHNS-GHNAGGSSWVILEDVKVPVDHLLGRENEGFPIITRN 280

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                    +      RV L+EA+ +A  R   G  L    +++  +  +A +I    A 
Sbjct: 281 FNKERFILTVDCNRQARVCLSEALQHAHDRETFGKTLASHQIIRHKLTTLAREIEGHWAW 340

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI-A 431
             ++A        ++++ A    +A I      + A   + E+ +  GG GY +  ++  
Sbjct: 341 LEQIAYHVKVHGWQTKDIASRIALAKIQGGRIVEQA---VRESQQIHGGMGYEKGMTMTE 397

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +  R+     I  GS   +         K  N
Sbjct: 398 QISRDLRLKVIGGGSEEILGDLAWREEHKRAN 429


>gi|241763348|ref|ZP_04761404.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241367500|gb|EER61799.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 387

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 110/347 (31%), Gaps = 29/347 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMV 162
                     G         +  +    +        L          +    V     V
Sbjct: 39  WDFKNALAKGGWLGMFMPEQYGGMGLGLSEVGVVLDELGQRCGFNGNSVFQYYVFPPGPV 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +  + K++ PK+ S E               +  G++E   G D + + +  +K  
Sbjct: 99  VHHGSEEIKKEFLPKLASGEEM-------------MCFGVSEPDNGVDTSRLKTFAKKDG 145

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLED-GSPNGLCYQRLKNK 278
                     W  ++  +D  ++L +   R        +   L       G+   R+ +K
Sbjct: 146 KRYLVNGRKVWISNALNADRILLLTRTSPRNPERPYDGMTLFLTQLKGKKGVEINRI-DK 204

Query: 279 IGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           I   +  + E+ F N   F    +G+       + D      +  A  ++   R +L   
Sbjct: 205 IMRNAVDSNEMVFENFEVFENEIIGEEGKGFRCLLDGLNPERIAVAFTAIGLGRGALDLT 264

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R V    +     +   +AD  + + AA  ++ + A  FDE K    EA  A+ 
Sbjct: 265 VQYAKDRVVFDRPIGKNQAVAHPLADSWIRLEAAELMAQKAARLFDEGKPCGPEANAAKF 324

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +         +        AM+  GG     E  ++R + E+    I
Sbjct: 325 L-------GSEAGFEAADRAMQFHGGYSMATEYHVSRFWMEARHLKI 364


>gi|226291326|gb|EEH46754.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18]
          Length = 438

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%)

Query: 36  AYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91
            +S    L  L + + +  H+  +          L+  A E  R           +    
Sbjct: 10  PFSEPPYLCGLPSPYYTEAHRTFQKACRAFMWENLTSHAFEWEREGTVPEHVWQTFAKHN 69

Query: 92  ERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +        L +  I+D  G+    WD  +  +   +  +   +           
Sbjct: 70  MLVPNLPSPLPVVWLKKLGINDILGVKVEDWDLIYTGIYLDEMRRSGLSGPSSSLSAGMA 129

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
           + + P       V    +P + + + P + +                   + +TE   G+
Sbjct: 130 YGVPP-------VLKFGSPELQERFLPDLLTC-------------KKRTCIAITEPDAGS 169

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           D+A IT++  K +DG  Y ++G K ++++ +   +  +A   G  G   +  ++    + 
Sbjct: 170 DVANITTRATKSADGKHYIINGSKKWITNGIWADYTTMAVRTGGPGPSGLSIMVVPLKNY 229

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
           +G+  +R     G   + T  +E  +       L+G   +    +        L   I  
Sbjct: 230 HGVTMRRFSVT-GQACSGTTFIELDDVKVPVENLIGQEGMGMKYIMTNFNHERLTITIAV 288

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ A  A   +      +  
Sbjct: 289 TRQARVALSAAFGYCLKREAFGKTLMDQPVVRHRLAKAGAELEAMWAWVEQ---FLYQLN 345

Query: 385 SRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPA 439
           + S+E A      +  + K     +       A+   GGSG           R YRE P 
Sbjct: 346 NMSKEQADFRLGGLTALAKAKAGMVLNECAQVAVLLFGGSGLTRTGQGEIAERIYREVPG 405

Query: 440 NSILLGSGNAMVLDVLNLLEK 460
             I  GS + ++   +  L K
Sbjct: 406 ARIPGGSEDVLLDLSVRQLVK 426


>gi|119387612|ref|YP_918646.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119378187|gb|ABL72950.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans
           PD1222]
          Length = 396

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 133/381 (34%), Gaps = 29/381 (7%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA--HKIRAARLYLMAQL 146
           P  +R ++ +   A   + R     G    ++   +   + +    H +  +        
Sbjct: 27  PRVDRIERDQDFAAQLEVARALGKAGYLKLMFPDLYTGSLSRPGLTHAVIVSEEAAYLNY 86

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                ++ +++ A  +     P + + +               P+ +      + +TE  
Sbjct: 87  AFETTIATALSCAYPIHRHARPAMRERYL-------------MPILEGRAVGSICMTEPN 133

Query: 207 GGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLL 262
            G+D A + +   +  +    + + G K ++S+   +D +I+    + G      +  +L
Sbjct: 134 VGSDSAGMET-AIRFDEASREWVIDGFKRYISNASRADVYIVWGITDPGAAPQKGMSAVL 192

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLD 319
                 GL + R+ + +G R +   E+            L         + +      + 
Sbjct: 193 VPADTPGLSFPRIYDFMGRRGSVVGEVALDGVRVPEENLLGQADAGFRIMLEAFNFERVI 252

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
                +   R +   A  +A+ R   G  L  + ++   IA ++  I AA  L+ R A  
Sbjct: 253 LGGSGLGVARAAFDLARDHAQSRVSFGERLGQKQLIWDMIAQMSWRIDAAELLTQRAARM 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS-IARHYRESP 438
           +D+     +        A   K    + A      A++ +GG G   +   + + YR++ 
Sbjct: 313 YDDGIGGKD----LMREASQAKLVATETAVFCSDRAVQILGGDGVTRQYGRVEQLYRDAR 368

Query: 439 ANSILLGSGNAMVLDVLNLLE 459
           A  I+ GS   M   ++   E
Sbjct: 369 ALPIVGGSSE-MCKYLIAARE 388


>gi|46139939|ref|XP_391660.1| hypothetical protein FG11484.1 [Gibberella zeae PH-1]
          Length = 377

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/300 (19%), Positives = 107/300 (35%), Gaps = 24/300 (8%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGH 231
           A  + +RE +   K  + +  +    GLTE   G+D  ++ +         D        
Sbjct: 93  AAGLITREVEKLEK--LARGKLISCFGLTEPNHGSDPGSLETTAVPHPTKKDAYILNGAK 150

Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELE 290
            W  +SP++D  ++ A+++G +  F++ R   D    G L    +K+K G R++ T  ++
Sbjct: 151 TWITNSPIADILLVWAKLDGVIRGFVIQR---DQCAPGTLETPTIKDKNGLRASITGMIQ 207

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVS 345
                      L   TG          L+SA   ++   +      L  A  Y       
Sbjct: 208 MDGCVVPAANVLPNVTGLKGPFG---CLNSARYGIAWGTIGALEDRLDRARTYTLEPKQF 264

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L    ++++ +AD + D A     + ++    D+  +       A  M  + K   C
Sbjct: 265 NKPLAQFQLIRKKLADASTDAAFGLQAALQVGRLKDKGLA-------APEMISMIKRQNC 317

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             A +      E  GG+   +E  I RH           G  +A  L +   +      F
Sbjct: 318 DRALSGARTLQEVFGGNVASDEYHIGRHVANLFVTQKYEGQSDAHALVLGRSITGLQAFF 377


>gi|121605042|ref|YP_982371.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594011|gb|ABM37450.1| acyl-CoA dehydrogenase domain protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 387

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 121/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +      G   ++    +         +       +     
Sbjct: 25  DEYHRKIDEARGYPE--AFVDALTQAGWLAAMIPHEYGGSGLGLT-EASVVMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + +   +    +    + + PKI + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMGTLLRHGSEAQKELYLPKIATGEWR------------LQSMGVTEPST 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLL 262
           GTD   I +   K  DG Y ++G K ++S    SD  I+LA+       +     +   +
Sbjct: 130 GTDTTRIKTTAVKK-DGRYVINGQKVWISRVQHSDWMILLARTTPLAEVKKKSEGMSIFM 188

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            D      +G+  + + N + N    T EL F N       L+G+       + D     
Sbjct: 189 VDLRQAEKSGMTVRPIPN-MVNH--ETNELFFENLEIPEENLIGEEGQGFKYILDGLNAE 245

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      +     Y   R V G  +     ++  IA+  ++I AA  + ++ 
Sbjct: 246 RTLIAAECIGDGYWFIDRVTKYVGERVVFGRPIGQNQGVQFPIAEAYIEIEAANLMRYQA 305

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD  +    +A  A+ +A    +             ++  GG G+  E  + R +RE
Sbjct: 306 CELFDARQPCGAQANMAKYLAAKASW-------EAANACIQFHGGFGFANEYDVERKFRE 358

Query: 437 SPANSI 442
           +    +
Sbjct: 359 TRLYQV 364


>gi|119475745|ref|ZP_01616098.1| Acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2143]
 gi|119451948|gb|EAW33181.1| Acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2143]
          Length = 390

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 122/362 (33%), Gaps = 29/362 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
               ER  +  F   ++  L  S   G+ C+        +   +A  +  A       + 
Sbjct: 28  DYWFERDQQGGFPEDFYQALATSGWLGI-CTPEAYGGSGLGITEAAIMMQAIAEAGGGMS 86

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A   +  ++   + V +  T    +                 PM +       G+TE   
Sbjct: 87  AASSIHINMFGLNPVVVFGTEEQKQRML-------------RPMVEGREKTCFGVTEPNV 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G +   + ++  +  D         W  ++ +++  ++LA+             +     
Sbjct: 134 GLNTTQLKTRAVRDGDRYIVSGQKVWISTAQVAEKILLLARTTPLEEVSKPTMGLSLFHT 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           D   + +  + ++ K+G +   + EL        +   +G+       +        +  
Sbjct: 194 DLDRSKIDVREIE-KMGRKCVDSNELFIDGLEVPIEDRIGEEGRGFEYILHGLNPERVLI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++   R++L  A  YA+ R V    +     ++  +A    ++ A+  +    A  +
Sbjct: 253 AAEAIGLGRLALQRATEYAKERVVFDRPIGQNQSIQHPLAINWANLEASRLMVMAAAEQY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++    A  A+ +A        + A     +A+   GG GY +E  + R+ RE    
Sbjct: 313 DNDENCGAAANAAKYLAG-------EAAFDACQQAVMTHGGYGYAKEYHVERYLREVMVP 365

Query: 441 SI 442
            I
Sbjct: 366 RI 367


>gi|317406234|gb|EFV86479.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54]
          Length = 388

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 109/349 (31%), Gaps = 36/349 (10%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM---- 161
           L      DG       +              AA +              S    ++    
Sbjct: 41  LHADLARDGWLGIAMPQEHGGAGLG---MTEAALMMQTIAASGAGFTGASAVHMNIFGLN 97

Query: 162 -VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            V +         W P + S                     +TE   G D   + ++  +
Sbjct: 98  PVVVFGNDEQRARWLPPLISG-------------REKACFAVTEPDAGLDTTKLGTRAVR 144

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLK 276
             D         W  ++ ++D  ++LA+             +     D     +  + ++
Sbjct: 145 QGDEYVVHGRKIWISTAQVADKMLLLARTTPLADVAKPTQGLSLFYTDLDRAKVEVREIE 204

Query: 277 NKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K+G ++  +  L        +   +G+       +        +  A  +V   R +L 
Sbjct: 205 -KMGRKAVDSNMLFIDGLRIPVADRIGEEGRGFEYILHGLNPERILIAAEAVGIGRAALE 263

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YA  R V G  +     ++  +A   + + AA  + F+ A+ +D  +     A  A
Sbjct: 264 RAVRYAGERKVFGRPIGQNQGIQHPLAQAWMQLEAADLMVFKAASLYDAGQPCGPAANAA 323

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           + +A    Y  C+ A       +  +GG GY +E  + R  RES    I
Sbjct: 324 KYLAAEAGYNACQTA-------VMTLGGMGYAKEYHVERLLRESFIPRI 365


>gi|221212912|ref|ZP_03585888.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221167125|gb|EED99595.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
          Length = 388

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H         G      D ++        +A  +  A     A L     +  ++   + 
Sbjct: 39  HDFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRAISASGAGLSGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  +      + P             P+          +TE   G D   +T+  ++ 
Sbjct: 99  VQVFGSDAQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLTTYARRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ +++  +++A+             +     D   + +  + + +
Sbjct: 146 GDHYVLSGRKIWISTAQVANKMLIIARTTPLEQVAKPTDGLSLFYTDLDRSRVEVREI-D 204

Query: 278 KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G ++  +  L   N       L+G        +        +  A  ++   + +L  
Sbjct: 205 KMGRKAVDSNMLFIDNLRVPHDDLIGTEGEGFRYLLHGLNPERILIAAEAIGLGQAALRR 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A   + + AA  +  + A  +D  +    EA  A+
Sbjct: 265 ATQYANERVVFGRPIGQNQAIQHPLAFAWMQLEAAWLMVMKAATRYDAGQPCGAEANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +     +  C+ A A         GG GY +E  + R+ RE     +
Sbjct: 325 YLGAEAAFHACQTAVA-------THGGMGYAKEYHVERYLRECMIPRL 365


>gi|161614882|ref|YP_001588847.1| hypothetical protein SPAB_02636 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168240735|ref|ZP_02665667.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168466472|ref|ZP_02700334.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194450401|ref|YP_002044888.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|200389551|ref|ZP_03216162.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|161364246|gb|ABX68014.1| hypothetical protein SPAB_02636 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408705|gb|ACF68924.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630965|gb|EDX49551.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|199601996|gb|EDZ00542.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205339841|gb|EDZ26605.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 387

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAIKREDRYVINGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|160899047|ref|YP_001564629.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364631|gb|ABX36244.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 407

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/439 (17%), Positives = 146/439 (33%), Gaps = 40/439 (9%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93
           MNA  +     A +   P    +    L + + +    ELA +A  +          G  
Sbjct: 1   MNAKDTLPAANAALLEMPFEGSERAAGLIDALNAFIHGELADLARAH----------GVD 50

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLEAGHLM 152
            +          + + S   G +      +            +    +Y      A H++
Sbjct: 51  HENSASTELLRQVWKLSHARGFYGMTLPEAMGGAGLSVLDQVLVKEAIYATGSPFAPHVL 110

Query: 153 SPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                   + AL+   TP   + +               P+ +   +I   LTE   G+D
Sbjct: 111 GELSGPPRIGALIRKATPLQMEQFI-------------LPVARAEKSICFALTEAAAGSD 157

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPN 268
             A+ ++     D  Y L G K F+S  P +D  +++A           +     D    
Sbjct: 158 AGALETRAVLEGDH-YVLHGRKRFISGSPFADFAVLMASTAPEGSPQREISAFFVDLHAP 216

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+        +  +S+ T ++           L+G+             +  L      +
Sbjct: 217 GVQVVSGYKTMAGQSS-TGDIVLDGCRVPAAQLIGEPGRGLALALGRITVNRLLHCPAML 275

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              +V+L +A  YA  R   G  +     ++  +AD+A +  AA AL  + A + D    
Sbjct: 276 GLAQVALRDARDYALGRQQFGRSIAQFQSIQHMLADMATEWMAARALMVQTARAIDAGID 335

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                  AR  A ++K +C + A  +   A++  GG G ++ R +   +R      +L G
Sbjct: 336 -------ARAQASMSKLFCSETAFRIADRAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTG 388

Query: 446 SGNAMVLDVLNLLEKGTNL 464
           +       +   L +    
Sbjct: 389 TSEIQRNTIAKELLERAGA 407


>gi|258589057|gb|ACV82568.1| acyl-CoA dehydrogenase domain protein [uncultured bacterium]
          Length = 548

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 106/538 (19%), Positives = 193/538 (35%), Gaps = 68/538 (12%)

Query: 33  GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQLHAY 87
             + Y+ D  L   + +F     KEL+          +     +++        P +  Y
Sbjct: 21  DFDYYADDPFLQKALKHFSGDEFKELDGKLRDFSPNVSHRWRCLSDNGGKPDKLPYIEHY 80

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                R D++        L +    +GL  S          R  A +   A+ YL+ QL 
Sbjct: 81  DGHNRRIDRIVRSSETVQLEKEVFSEGLFSS----------RVTAWEC-MAKRYLLHQLG 129

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ------KTSVAIGLG 201
              +M P   +  ++AL+           K F  ++ P  K+ ++           IG  
Sbjct: 130 EFGVMCPIACTEGLIALI-----------KQFPEDHSPEIKSILEHCTEGVNGEYGIGAQ 178

Query: 202 L-TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLV 258
             TE +GG++I A   +        Y L G K+F S+  +D  ++ A+V G   VG F+V
Sbjct: 179 FVTEIQGGSNIPANLLEAVPEGSH-YRLYGSKFFTSAVHADYAVITAKVSGSEDVGTFVV 237

Query: 259 PRLL----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
           P  +    +    N     R+K K+G     T ELE+     + +G  N     V  + +
Sbjct: 238 PAWMQGNKDKEIRNHFRINRIKWKLGTAEVPTAELEYDGAICYKVGPTNRGVANVVGIVL 297

Query: 315 -LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID----QPVMKRAIADIALDIAAA 369
            L  + +AI + + M  +  EA  Y+  R V G  + +       ++  + +    +A  
Sbjct: 298 SLSRIAAAITNAASMTRASREAQLYSEFREVFGAKIGEWALANQQVRDVVHEAQRSLAGL 357

Query: 370 ---TALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +L   L        +  E      E    R +  I K      A   I + +   G
Sbjct: 358 FKIFSLFQSLGGHLQPGLASEEPSKIQRERFLLRELIIIQKLVTSHDAVNTIRKGIAIFG 417

Query: 421 GSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF-------EQLFSTL 472
           G+G IE+  ++ R +R++  N +  G  N +++ V   + +    +       + L    
Sbjct: 418 GNGVIEDFSALPRLFRDAMVNELWEGPRNVLLMQVFRDISRAAAFYPPEVFLNDLLSGAP 477

Query: 473 EQDLGSSGKKVITILR----DSISLCKEDKGLA-RFLTEKIALASSAAALYRAGMNDI 525
             D+   G++            +      + +A   L   +  A    AL   G   I
Sbjct: 478 LGDIADLGRRASAFTAKPPFQKLDPDSRLQAVAWEELIVDVFRAYQETALREVGPEPI 535


>gi|265985097|ref|ZP_06097832.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
 gi|264663689|gb|EEZ33950.1| acyl-CoA dehydrogenase [Brucella sp. 83/13]
          Length = 324

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 113/302 (37%), Gaps = 34/302 (11%)

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + PKI S E                  G+TE   GTD 
Sbjct: 23  CHAQMYTMGTLLRHGSDEQKACYLPKIASGELR------------LQAFGVTEPTSGTDT 70

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGS 266
            A+ +  ++  D    ++G K + S +  SD  ++LA+     +G      +  L+ D +
Sbjct: 71  GALKTTARREGDEF-IINGQKIWTSRAEYSDLMLLLARTSPLTDGMKKTDGLSVLIVDMA 129

Query: 267 P---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  + ++  + N +  T E+ F N       L+G+       +        +  
Sbjct: 130 KAKNNGLTIRPIRTMM-NHA--TTEVFFDNLRVPVSNLIGEEGKGFRYILSGMNAERILI 186

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +    +++ YA+ R + G  +     ++  IA    ++ AA  +       +
Sbjct: 187 AAECIGDAKWFTQKSVDYAKERSIFGRPIGQNQGIQFPIAKAYANMRAAELMVQSALALY 246

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +  ++   EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 247 EAGQNPGAEANMAKMLAA-------DASFEAANACVQTHGGFGFAEEYDVERKFRETRLY 299

Query: 441 SI 442
            +
Sbjct: 300 QV 301


>gi|311106181|ref|YP_003979034.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310760870|gb|ADP16319.1| acyl-CoA dehydrogenase, N-terminal domain protein 8 [Achromobacter
           xylosoxidans A8]
          Length = 401

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 118/362 (32%), Gaps = 29/362 (8%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMT 166
           R     G       R +          +        A    G +   +   A   +    
Sbjct: 42  RLLRESGFMGMTIPREYGGQGLSYLDTVLVVEEMARACATMGRITVEANMGAIGAIMQYG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +       A  + + +                 + ++E + G+  + + ++  +  D   
Sbjct: 102 SHEQKTLAAGCVLAGD--------------KPAICISEPQAGSAASEMGTRAVRKGDDYL 147

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL----EDGSPNGLCYQRLKNKIGNR 282
                 W     +S   ++ A+V        +   +     DG+ +GL   +    +G R
Sbjct: 148 INGEKYWITGGGVSRLHLIFARVIDDGEDLGIGAFIHVREPDGADDGLEIAKRSYAMGVR 207

Query: 283 SNATVELEFSN------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
                 ++F +              L      +        + +  +++   + +  EA+
Sbjct: 208 GIPETYIKFHDLKVHKSMLVVPPEGLKRGFAGLMQAYNAQRVGAGTVALGIAQGAFEEAV 267

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y ++R   G  + +   ++  +AD+A+ + AA  +    A S      R+        +
Sbjct: 268 DYVKQRQQFGRPIAEFQGLQWMVADMAIQLNAARHMLHAAARS---GTPRTF-GFPDLSL 323

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           A   K +  + A  V  +A++  G SGY  +  + RH R++   +I  G+   +   V +
Sbjct: 324 AAQAKIFAAETAQRVTNDALQLHGSSGYGRDMPMERHVRDARMFTIAGGTAQILRTQVAS 383

Query: 457 LL 458
            +
Sbjct: 384 AV 385


>gi|73539131|ref|YP_299498.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72122468|gb|AAZ64654.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 391

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 138/429 (32%), Gaps = 54/429 (12%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           Y ++ LL    A     + +EL  L   +                  L +  P       
Sbjct: 4   YLTNPLLTETRAAVRRFIDEELRPLERELG-----------------LGSEDPW-----P 41

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           VE       + RRS   GL+ +             A   +   +     L+A    S  V
Sbjct: 42  VET---LRNVWRRSSELGLYAA---------CLPVALGGKGLNIAEQCALKADLAASGCV 89

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++  +  P    +   K  + E       P+ +   +    LTE   G+D  +I +
Sbjct: 90  LAPHVLGDLGGPPRVGNML-KYATPEQLDRYFLPVIRGEKSTCFALTETHSGSDAQSIAT 148

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                 D +       +   +P +   I++   +  V    +  +L D    G+   +  
Sbjct: 149 TAVADGDTLVVNGSKHYISGAPFASFAIVMCVTDATVSPPAISAVLVDLDLPGVTVTQAY 208

Query: 277 NKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM-----SVSGMR 329
             + G       ++ F N         N+  G     K+ +  ++   +      +    
Sbjct: 209 VPMSGQH--IDADIAFDNVRVP---RANILGGEGNGFKLGMSRINVNRLLHCPSMLGLAT 263

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   ++ YA +R   GG +     ++  +AD+A  + A  ++  +         + ++ 
Sbjct: 264 SAYRSSLEYAGKRRQFGGPIARFQAIQHMLADMAAALWACESMIAQT-------AALADA 316

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
            A  R+ A   K +  +    V  +A++  G  G      + + +R+     +  G+   
Sbjct: 317 GADLRMKAAACKLFVSERCFEVADKAVQIHGNVGVTRGHPVEQAFRKLRMFRVFTGTSEI 376

Query: 450 MVLDVLNLL 458
               +   +
Sbjct: 377 QRNTIAKAI 385


>gi|39934682|ref|NP_946958.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192290199|ref|YP_001990804.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648532|emb|CAE27053.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|192283948|gb|ACF00329.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 390

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 127/362 (35%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 31  RKLDREMAYP--KAFVDALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGG 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      W PKI S E                  G+TE   GTD 
Sbjct: 88  CHAQMYTMGTLLRHGSDEQKAKWLPKIASGELR------------LQAFGVTEPTSGTDT 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
            ++ +  +K ++G Y ++G K + S +  SD  I+LA+   +         +   L D  
Sbjct: 136 TSLKTFAKKDANGDYVVNGQKIWTSRAEYSDLMILLARTTPKDQVTKKTEGLSVFLVDMR 195

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               +GL  + ++  + N +  T E+ F++       L+G+       +        +  
Sbjct: 196 EARGHGLEIRPIRTMM-NHA--TTEVFFTDMKVPKENLIGEEGKGFRYILSGMNAERILI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   +  +A+A  YA+ R V G  +     ++  IA    ++ AA  +       +
Sbjct: 253 ASECVGDAKWFIAKASAYAKDRAVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEATRKY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A          +       ++  GG G+ EE  + R +RE+   
Sbjct: 313 EAGMDCGAEANMAKMLAA-------DASFEAANACIQTHGGFGFAEEYDVERKFRETRLY 365

Query: 441 SI 442
            +
Sbjct: 366 QV 367


>gi|168030249|ref|XP_001767636.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681165|gb|EDQ67595.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 375

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 118/367 (32%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++       +          P +   +H +  A +  +        + 
Sbjct: 13  WEKAEFP---FEIIPHLASLKIAGGTIKGYGCPGLSILSHALVGAEIARVDASCCTFALV 69

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S    S + ++      + + P +              +        LTE   G+D ++
Sbjct: 70  HSSLCMSTIGMLGNEEQKQKYLPSL-------------ARFDTIGCWALTEPAYGSDASS 116

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  ++  +D  ++ A+         +   +      G    
Sbjct: 117 LNTTAVKVEGGWLLNGQKRWIGNATFADIVVVFAR---NTQTNQINGFIVKKGTPGYRAT 173

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++   + F      L       +  K+L    +  A + +      
Sbjct: 174 KIENKIGLRIVQNGDIIMKDVFIPDEDRLTGINSFQDTNKVLAVSRIMVAWLPIGVCMGV 233

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +  +  +I A   L ++L   ++  K       
Sbjct: 234 YDICYRYLQERKQFGAPLAALQINQEKLVRMLGNIQAMFLLGWKLCKMYESGK------- 286

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A   +A   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 287 MTPGQASLCKAWNTLRARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINT 346

Query: 452 LDVLNLL 458
           L     +
Sbjct: 347 LVTGREI 353


>gi|218461253|ref|ZP_03501344.1| acyl-CoA dehydrogenase protein [Rhizobium etli Kim 5]
          Length = 376

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 130/355 (36%), Gaps = 68/355 (19%)

Query: 242 AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELE 290
             ++LA++EG       +  F+VP+ L       G+ N +    +++K+G   NAT  + 
Sbjct: 5   VHLVLARIEGAPEGTKGISLFIVPKFLVGHDGALGARNTVSCGAIEHKMGIHGNATCVMN 64

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--- 347
           +    GFL+G  N     +  M     L   +  ++   ++   A  YAR R        
Sbjct: 65  YDEATGFLIGAENRGLNAMFVMMNEARLMVGLQGIAISEIAYQNAAAYARDRIQGRSLSG 124

Query: 348 ---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ 392
                     +I  P ++R +  I     A  A     A   D A   ++E         
Sbjct: 125 VKAPDKKADPIIVHPDIRRTLMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDI 184

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
             ++ PI K             A +  GG GYIEE  ++++ R++    I  G+     L
Sbjct: 185 LGLVTPILKGVMTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQAL 244

Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR--FLTEKIAL 510
           D++                  +   + G+  + + ++    C+E++G  +  F T+ +  
Sbjct: 245 DLVG----------------RKLALNGGRAAMALFKEIGDFCEENRGDEKFSFFTKHL-- 286

Query: 511 ASSAAALYRAGMNDIADV---FLENRFL--DNCHSTHCMLHGRFNAAHIIDSLYL 560
                   + G+ND+      F++N     DN         G  +  H+   + L
Sbjct: 287 --------KKGLNDVQGATMWFMQNAMAKPDNAG------AGSTDYMHLFGLVVL 327


>gi|167622162|ref|YP_001672456.1| crotonobetainyl-CoA dehydrogenase [Shewanella halifaxensis HAW-EB4]
 gi|167352184|gb|ABZ74797.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 378

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 12/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +  ++  DG   L+G K F++S     +I++   +      +   
Sbjct: 122 AITEPSAGSDVGSLLTTYKRR-DGKVYLTGSKCFITSAAGAPYIVVMAKDADSEKPIFTE 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IY 317
              D S  G+   +L  K+G R ++  EL+F            +       +K       
Sbjct: 181 WFVDMSKPGIKLSKLP-KLGLRMDSCCELQFDEFELEESDMFGIEGNGFMRVKEEFDSER 239

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +  A
Sbjct: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVYEAA 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D     S ++A         K++C      VI  AM+ +GG     E  I+R +R+ 
Sbjct: 300 WKCDNGTMTSGDSAM-------CKFYCANAGFEVIDSAMQVLGGYAIAGEHRISRMWRDI 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  GS    +L +   + K
Sbjct: 353 RVDRVSGGSDEMQILTLGREVLK 375


>gi|116050157|ref|YP_791026.1| Acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585378|gb|ABJ11393.1| Probable Acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 390

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+  ++GP    R D          L+ R+   GL      R    +    +H  +A
Sbjct: 28  ENDPRQDSHGPSDALRQD----------LVARARAAGLLTPHASREMGGLAL--SHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTAIRDGDD-YLINGRKWLITGAEGADFGIVMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   E  + R +R+     I  G      + +   L
Sbjct: 347 GVTGETVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|242021278|ref|XP_002431072.1| Short-chain specific acyl-CoA dehydrogenase, putative [Pediculus
           humanus corporis]
 gi|212516306|gb|EEB18334.1| Short-chain specific acyl-CoA dehydrogenase, putative [Pediculus
           humanus corporis]
          Length = 307

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 93/275 (33%), Gaps = 25/275 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E+ DK    P     +++    GL       +             A          A
Sbjct: 41  PIAEKIDKNHLFP--KEQIKKMGELGLMAVDVPENLGGAGLDYLAYAIAMEEISRGCASA 98

Query: 149 GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           G +MS + +      L   T    K++               P           L+E   
Sbjct: 99  GVIMSVNNSLYLGPILKFGTDEQKKNFI-------------TPFTTGDRVGCFALSEPGN 145

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           G+D  A ++   +  +         W  +   S+A ++ A  +       +   +     
Sbjct: 146 GSDAGAASTTAVEKDNEYVLNGTKAWITNGYESEATVVFATTDKSKKHKGISAFIVPKPT 205

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVS 326
            GL   + ++K+G R ++T  L F +     +   ++   P    KI ++ LD+  + ++
Sbjct: 206 KGLSLGKKEDKLGIRGSSTCNLIFEDCK---IPKESLLGEPGMGFKIAMMTLDAGRIGIA 262

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356
              + +A+     A+ YA +R+  G  ++    ++
Sbjct: 263 SQALGIAQSSLECAVDYASKRNAFGKSILKLQAIQ 297


>gi|148272206|ref|YP_001221767.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830136|emb|CAN01065.1| putative glutaryl-CoA dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 392

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 117/368 (31%), Gaps = 29/368 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W + EF      ++      GL    +  +             A  L  +    A  +  
Sbjct: 44  WARAEFP---RHVVAGLAERGLFGMPFPETRPFENSAVYRGWAALELGRVDASIATLVGM 100

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA- 212
            S      VA+  +P    +W P+  S E             +    GLTE   G+D A 
Sbjct: 101 QSGLVMGSVAVAGSPEQRAEWLPRFASGE-------------ILGSFGLTEPLSGSDSAR 147

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +   +  D        +W  +  +SD  ++ A+             L      G   
Sbjct: 148 GLRTVATRRGDEWSITGSKRWIGNGTISDVTVIWAKDADDGQVKG---FLVPNDSPGFRA 204

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
            R+++K   R     ++E           L   T   +   +L     + A  ++     
Sbjct: 205 TRIEDKQALRIVQNADIELDGVIVPERNRLQNGTSFADTAAVLRLTRAEVAWAAIGISIG 264

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y   R   G  L    +++  +     +I A+  L  R +   DE     E +
Sbjct: 265 AYEAAVAYTGEREQFGKPLGAHQLIQDLLVRSLGNITASIGLVTRASEMVDEGTQSDEHS 324

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K +        +A   E  GG+G + +  +AR + ++ A     G+    
Sbjct: 325 ALA-------KAYATSRMRETVAWCREAFGGNGIVLDYDVARFFADAEAIYSYEGTREMN 377

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 378 TLIVGRAI 385


>gi|108803226|ref|YP_643163.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
 gi|108764469|gb|ABG03351.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM
           9941]
          Length = 385

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 131/358 (36%), Gaps = 28/358 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             LL +     L     +    P +   A  +    L              S      + 
Sbjct: 46  FELLPKLAELKLAGGTIEGYGCPGLSAVAAGLVTMELSRGDGGLNIFFGGTSSLVMPAIY 105

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           ++ +    + W P             PM +        LTE   G+D  A+ ++ ++  +
Sbjct: 106 MLGSEEQRERWLP-------------PMARLEKLGAFALTEPEHGSDAVALETRARRRGE 152

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G       +W  ++  +D  ++ A+ + G VG F+V R        GL  + +  K   R
Sbjct: 153 GYVIDGRKRWVGNASFADVILVWARDDEGEVGAFVVER-----GAPGLSARVMAGKTAVR 207

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
           S+   E+E S         L  +    +  ++L  +   +A  ++         A+ +AR
Sbjct: 208 SSWQAEVELSGVEVPAENRLERARSFRDASRVLAAMRYGAAWAALGHAAACYEAALAHAR 267

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L+   ++++ +A +  +I +   L  RL+   D+ K           MA + 
Sbjct: 268 ERRQFGRPLVSFQLVQKKLAGMLAEITSMQLLCLRLSRLADQGK-------MTGAMASLA 320

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K    + A  V  EA + +GG+G + E  +ARH  +  A     G+ +   L V   +
Sbjct: 321 KMNNARKARGVCLEARDILGGNGLLLEHHVARHAADIEAVYTYEGTDDINALIVGRDI 378


>gi|157376360|ref|YP_001474960.1| crotonobetainyl-CoA dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157318734|gb|ABV37832.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 378

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 106/263 (40%), Gaps = 12/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +  ++ +  +Y      +  S+  +   +++A+ +      +   
Sbjct: 122 AITEPSAGSDVGSLLTTYKRKNGKVYLTGSKCFITSAAGTPYIVVMAK-DADSEKPIFTE 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
              D S  G+   +L  K+G + ++  EL+F         + G+       V++      
Sbjct: 181 WFVDMSKPGIKLGKLP-KLGLKMDSCCELQFDELELEESDMFGEEGNGFLRVKEEFDSER 239

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +  A
Sbjct: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQDKFAHMAIKLNSMKNMVYEAA 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+    S ++A         KY+C      VI  AM+ +GG     E  I+R +R+ 
Sbjct: 300 WKCDQGTMTSGDSAM-------CKYFCANAGFEVIDSAMQVLGGYAIAGEHRISRMWRDI 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  GS    +L +   + K
Sbjct: 353 RVDRVSGGSDEMQILTLGRSVLK 375


>gi|73539108|ref|YP_299475.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72122445|gb|AAZ64631.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 390

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 17/278 (6%)

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAF 243
                P  +  +      TE   G+D   + +   +  D  Y ++G K F++    +D  
Sbjct: 117 ERFLLPTLRGELKWCFAQTEPDAGSDPGGMKTTAVRDGDH-YVINGFKRFITGAADADYA 175

Query: 244 IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-VELEFSNTFGFL--- 298
            ++A  +   G    +   + D    G+   R +  +    + T  E+ F +    L   
Sbjct: 176 QLMAATDRTKGSHGGISAFIVDMKSPGVKLLRAQKML---VDDTPWEIAFDDVRVPLENR 232

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G         + +  ++ +     +   M   L  A  YA+ R      L ++  ++  
Sbjct: 233 IGAEGEGFRHAQKVLTVLRVRHGARACGVMERCLELAASYAKERVTFDKPLAERQGVQWL 292

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD  L+      +    A   D  +    EA  A       K +    +       M+ 
Sbjct: 293 IADSYLEWHQLELMVRNAAWKHDRGEDIRTEAYMA-------KNFGDSKSFEAADRCMQL 345

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG G   E  I + +R+  +  I  G  + +   +  
Sbjct: 346 HGGIGLSTELPIEKFWRDQRSMLITDGPTDVLKGAIAR 383


>gi|218891823|ref|YP_002440690.1| putative Acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254240646|ref|ZP_04933968.1| hypothetical protein PA2G_01305 [Pseudomonas aeruginosa 2192]
 gi|126194024|gb|EAZ58087.1| hypothetical protein PA2G_01305 [Pseudomonas aeruginosa 2192]
 gi|187939975|gb|ACD39110.1| acyl-CoA dehydrogenase family protein [Pseudomonas aeruginosa]
 gi|218772049|emb|CAW27828.1| Probable Acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
          Length = 390

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+  ++GP    R D          L+ R+   GL      R    +    +H  +A
Sbjct: 28  ENDPRQDSHGPSDALRQD----------LVARARAAGLLTPHASREMGGLAL--SHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTATRDGDD-YLINGRKWLITGAEGADFGIVMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   +  + R +R+     I  G      + +   L
Sbjct: 347 GVTGDTVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|331695630|ref|YP_004331869.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326950319|gb|AEA24016.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 398

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/375 (21%), Positives = 143/375 (38%), Gaps = 30/375 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R  +  F P    L+  +   G    +    +            AA    +A +++   
Sbjct: 42  QRHVEARFSP---ELVEAAGELGAFGLLAPEEYGGAGADLRSACLAAEE--IATVDSSLA 96

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           ++  V + S+  L+       D   +I                S  +  GLTE  GG+D 
Sbjct: 97  VTVHVQAISVALLVHLAADRTDLLKEIV---------PGAAAGSTFVSFGLTEPSGGSDA 147

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFL--VPRLLEDGS 266
             I ++ +++ D  + ++G K F+++   P S   I+ A  +   G     V   L    
Sbjct: 148 GNIGTRARRVGDD-WVINGAKQFITNSGTPFSRYVILFAATDDDPGTGRPPVSAFLVPLD 206

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIM 323
             G+       K G RS+ T  L F +        L     G  E ++ L    L  A M
Sbjct: 207 APGVTVGPAYAKQGWRSSDTHPLYFDDVRLPADALLGEQGRGYREALRFLTWARLPIAAM 266

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           S+   R  L +++ +   R   G  L     +   +ADIA  +A AT L++  A  +D  
Sbjct: 267 SIGVARGCLVDSVRFVGERASMGRPLGGHQGVAFQVADIAAAVATATVLTYDGAWKYDRG 326

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAA       I K    ++A +    A +  GG G++EE +  RH++++   ++ 
Sbjct: 327 LPIEREAA-------IAKLVASELANSAGYTATQLAGGYGFMEETASTRHHQDARILTVG 379

Query: 444 LGSGNAMVLDVLNLL 458
            G+     + +   L
Sbjct: 380 EGTSEVQRMLIARGL 394


>gi|41406821|ref|NP_959657.1| FadE12_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395171|gb|AAS03040.1| FadE12_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 388

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 115/357 (32%), Gaps = 32/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLM 152
           D+    P            G         +                       + A   +
Sbjct: 32  DQAHEFPT--EFYNAIAEGGWLGMTIPTEYGGHGLGITEATILLEEVAKSGGAMNAASSI 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     V +  +  +     P + + +               +  G+TE   G D +
Sbjct: 90  HLSIFGMQPVVVHGSDELKARTLPAVATGQVH-------------VCFGVTEPGAGLDTS 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN 268
            IT+  ++  D         W   +  SD  ++L + +           +   + D   +
Sbjct: 137 RITTFAKRDGDRYIVNGRKVWISKAMESDKILLLTRTQAYDEVTKKTDGMTLFITDLDRS 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +  + +  K+G  + ++ EL   N    +   +G+       + D      +  A  ++
Sbjct: 197 RVDIRPI-RKMGRNAVSSNELFIDNLEVPVEDRIGEEGKGFQYILDGLNPERMLIAAEAL 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              RV+L +A+ Y   R V G  +     ++  +AD    + AA  +  +    +D  K 
Sbjct: 256 GIGRVALDKAVKYGNEREVFGRPIGMNQGLQFPLADSLARLDAAELMLRKATWLYDNGKP 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              EA  A+ +       C          A++  GG GY EE  I R++RE+    I
Sbjct: 316 CGREANTAKYL-------CADAGFTAADRALQTHGGMGYAEEYHITRYFREARLMKI 365


>gi|90425738|ref|YP_534108.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90107752|gb|ABD89789.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 390

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 129/362 (35%), Gaps = 36/362 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G    +    +     K +           A    G  
Sbjct: 31  RKLDRAMEYP--QAFVDALTEAGYLSVLIPEEYGGSGLKLSAAAAILEEIQKAGCN-GGG 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    + +   +W PKI S E                  G+TE   GTD 
Sbjct: 88  CHAQMYTMGTLLRHGSDKQKAEWLPKIASGEVR------------LQAFGVTEPSSGTDT 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
           +++ +  +K  +G Y ++G K + S +  SD  I+LA+   +         +   L D  
Sbjct: 136 SSLKTFAKKDDNGDYVVNGQKIWTSRAEYSDLMILLARTTPKEQSAKRTDGLSVFLVDMK 195

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               +GL  + ++  + N S  T E+ F++       L+G+       +        +  
Sbjct: 196 QAKDHGLTIRPIRTMM-NHS--TTEVFFTDLHVPAENLIGEEGKGFRYILSGMNAERILI 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +  +A+A  YAR R V G  +     ++  IA     + AA  +    A  +
Sbjct: 253 ASECIGDAKWFIAKATAYARERVVFGRPIGQNQGIQFPIAKAYAAMRAAELMVKEAARKY 312

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           +       EA  A+++A    +             ++  GG G+ EE  + R +RE+   
Sbjct: 313 EAGLDCGAEANMAKMLAADASW-------EAANACVQTHGGFGFAEEYDVERKFRETRLY 365

Query: 441 SI 442
            +
Sbjct: 366 QV 367


>gi|255318553|ref|ZP_05359786.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262378779|ref|ZP_06071936.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
 gi|255304545|gb|EET83729.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens
           SK82]
 gi|262300064|gb|EEY87976.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens
           SH164]
          Length = 386

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 118/365 (32%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     +      G   ++    F       A +       +     
Sbjct: 24  DEYHRKIDEDKTYPE--EFVDALTSAGWLAAMIPEEFGGSGLGLA-EASVVMEEINRSGG 80

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + S +    +    + + PKI S E+                + +TE   
Sbjct: 81  NSGACHGQMYNMSTLLRNGSQVQKEFYLPKIASGEWR------------LQSMAVTEPTT 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+LA+       +     +   + 
Sbjct: 129 GTDTTKIRTTAVKKGDSYVINGQKVWISRVQHSDWMILLARTTPLAEVKKKSEGMSIFMV 188

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      +G+  Q + N + N    T EL F N       L+G+       + D      
Sbjct: 189 DIKEAMKSGMAVQPIPN-MVNH--ETNELFFENLEIPEENLIGEEGKGFKYILDGLNAER 245

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +  A  Y + R V G  +     ++  +A+  ++I AA  + FR  
Sbjct: 246 TLIAAECIGDGYWFMDRATKYVKDREVFGRPIGQNQGVQFPLAESFIEIEAANLMRFRAC 305

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD  +S   EA  A+ +A  + +             ++  GG G+  E  I R +RE+
Sbjct: 306 ELFDHGQSCGAEANMAKYLAAKSSW-------EAANHCLQFHGGFGFANEYDIERKFRET 358

Query: 438 PANSI 442
               +
Sbjct: 359 RLYQV 363


>gi|220926547|ref|YP_002501849.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219951154|gb|ACL61546.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 387

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 114/375 (30%), Gaps = 44/375 (11%)

Query: 89  PGGERWDKVEFHPAWHALLRRSI-----------HDGLHCSIWDRSFEPVVRKQAHKIRA 137
               R    EF P +H  +  +              G   ++    +         +   
Sbjct: 13  RDAVRALCAEFPPEYHRRIDEARGYPEAFVDALTKAGWMAALIPEEYGGSGLGLT-EASV 71

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
               +             + + + +    +    + + P+I + E               
Sbjct: 72  IMEEINRSGGNSGACHGQMYNMNTLVRHGSEEQRQKYLPRIAAGELR------------L 119

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RV 253
             +G+TE   GTD   I +   +  D         W      SD  I+LA+       R 
Sbjct: 120 QSMGVTEPTAGTDTTRIKTTALRKGDRYVINGQKVWISRIQHSDLMILLARTTPLDQVRK 179

Query: 254 GCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
               +   L D       G+  + + N + N    T EL F +       L+G+      
Sbjct: 180 KSEGMSIFLVDLHEAQKKGMTVRPILN-MVNH--ETNELFFDDLEIPAENLIGEEGQGFK 236

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +           A   +      + +   YA+ R V G  +     ++  IA+  +++ 
Sbjct: 237 YILTGLNAERTLIAAECIGDGYWFIDKVSAYAKERKVFGRPIGQNQGVQFPIAESFIEVE 296

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + +     +D  +    +A  A+ +A    +             ++  GG G+  E
Sbjct: 297 AANLMRYEACRLYDAHQPCGAQANMAKYLAAKASW-------EAANACIQFHGGFGFACE 349

Query: 428 RSIARHYRESPANSI 442
             + R +RE+    +
Sbjct: 350 YDVERKFRETRLYQV 364


>gi|302771341|ref|XP_002969089.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
 gi|300163594|gb|EFJ30205.1| hypothetical protein SELMODRAFT_90623 [Selaginella moellendorffii]
          Length = 415

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 119/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++ +     +          P +      I AA +  +    +  ++ 
Sbjct: 64  WEKAEFP---FEIVPKMASLNIAGGTIQGYGCPGLSILGSAIAAAEVARVDASCSTFILV 120

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +A+  + +  + + P++              K        LTE   G+D ++
Sbjct: 121 HSSLAMLTIAMCGSEQQKQKYLPQL-------------AKLDTIACWALTEPDYGSDASS 167

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +++   K   G       +W  +S  +D  ++ A+             +      G    
Sbjct: 168 LSTTATKAKGGWILNGQKRWIGNSTFADVAVIFARNTETNQING---FIVRKGTPGYRAT 224

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++   + F      L       +  K+L    +  A   +      
Sbjct: 225 KIENKIGLRIVQNGDIVLKDAFIPDDDRLPGINSFADTNKVLAISRIMVAWQPIGVTMGV 284

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R   G  L    + +  +  +  +I A   + +RL   +D  K       
Sbjct: 285 YDMCHRYLLERKQFGAPLASLQINQEKLVQMLGNIQAMALVGWRLCKLYDSGK------- 337

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W  K A   +A   E +GG+G + +  +A+ + +        G+     
Sbjct: 338 MTPGQASLAKSWNTKRARETVALGRELLGGNGILVDFLVAKAFCDLEPIYTYEGTYEVNA 397

Query: 452 LDVLN 456
           L    
Sbjct: 398 LVTGR 402


>gi|239933378|ref|ZP_04690331.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291441742|ref|ZP_06581132.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291344637|gb|EFE71593.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 386

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 118/362 (32%), Gaps = 25/362 (6%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
           H  W       +   L    +        R  AH +               L +  +   
Sbjct: 38  HDGWKRYAELGVQGLLLPPAYGGGGYDPPR-YAHVMEELGFSCPDNGLLMALGAHILAVE 96

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +A   +      + P + S                     +TE   G+D  A+T+  +
Sbjct: 97  LPIAEFGSEEQRTSYLPALASG-------------RAIGAHAMTEPGTGSDALALTTTAR 143

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           +  D        ++  ++P++D F++ A ++  +G   V   L +   +G+       K+
Sbjct: 144 RDGDRYVLDGHKRYITNAPVADVFLVHATLDRSLGFTGVTAFLVERGDSGIEVTPGSEKL 203

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAI 336
           G R+ +  ++            L             +  + A++    +  MR  L E +
Sbjct: 204 GLRTASWGDVVLDGCRIPASRRLGAEKQGAAIFARTMAFERALILAPWLGVMRRELDECV 263

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y RRR   G  +     +   + D+ +    A  ++   A               A + 
Sbjct: 264 RYCRRRRQFGKHIGHFQSVSNRLVDMRMKWELARLITRSAAAEL--------TGPDAGVH 315

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             ++K +  + A  +   A++  G  GY  +  + R+ R++   ++  G+ +     V  
Sbjct: 316 PELSKLYTSEAAVEMFTSALQIYGALGYTHDGRVERNLRDALGMTLSSGASDMQRNIVAG 375

Query: 457 LL 458
            +
Sbjct: 376 RM 377


>gi|11498569|ref|NP_069797.1| acyl-CoA dehydrogenase (acd-6) [Archaeoglobus fulgidus DSM 4304]
 gi|2649648|gb|AAB90279.1| acyl-CoA dehydrogenase (acd-6) [Archaeoglobus fulgidus DSM 4304]
          Length = 394

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 116/301 (38%), Gaps = 27/301 (8%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                 +++   V  A  +    T    + + PKI              K  +   + LT
Sbjct: 82  GMAGVWYMVLTEVFGALTIVRHGTEEHKEKYLPKI-------------AKGEMEFCMALT 128

Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLV 258
           E   GT+  AI +   K  D  + ++G+K F+S    +   +++A+   R         +
Sbjct: 129 EPDAGTNTLAIRTTAVKDGDE-WVINGNKIFISGADRAKGMLIIARTTPREKAEKKTHGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              L D   + +    +  K G   + T E+ F+N       L+  L+     + D    
Sbjct: 188 SLFLADLPNDAVKVNPIP-KHGINYSKTCEVSFNNLRLPENALIPPLDGGWYHLLDTLNP 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +     ++   R+++++A+ Y+++R V    +     ++  +A+    +  A  ++F+
Sbjct: 247 ERMSFTTAAIGISRLAISKAVEYSKQRKVFADPIGSYQGLQFPLAEAYATLECAELMNFK 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  FD+     E        A + K    +     +  AM+  GG GY +E  + R +R
Sbjct: 307 AATLFDQGAHYRE----VGAAANMAKAVAVEAGIKAVYWAMQTFGGYGYAKEYDVERWWR 362

Query: 436 E 436
           E
Sbjct: 363 E 363


>gi|127513603|ref|YP_001094800.1| crotonobetainyl-CoA dehydrogenase [Shewanella loihica PV-4]
 gi|126638898|gb|ABO24541.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 378

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 102/263 (38%), Gaps = 12/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +  ++ +  +Y      +  S+      +++A+ +      +   
Sbjct: 122 AITEPSAGSDVGSLLTTYKRRNGKVYLTGSKCFITSAAGIPYVVVMAK-DADSEKPIFTE 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IY 317
              D +  G+   +L  K+G + ++  EL+F            +       +K       
Sbjct: 181 WFVDMTKPGIKLSKLP-KLGLKMDSCCELQFDEVELEESDMFGIEGNGFLRVKEEFDSER 239

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +  A
Sbjct: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGETIGRFQLIQDKFAHMAIKLNSMKNMVYETA 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D+    S ++A         KY+C      VI  AM+ +GG     E  I+R +R+ 
Sbjct: 300 WKCDQGTMTSGDSAM-------CKYFCANAGFEVIDSAMQVLGGYAIAGEHRISRMWRDI 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  GS    +L +   + K
Sbjct: 353 RVDRVSGGSDEMQILTLGRAVLK 375


>gi|330895556|gb|EGH27866.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 190

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 7/195 (3%)

Query: 14  QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQE 72
            ++Q +++    NQPP   G N Y  D  L    + F +      ++  G          
Sbjct: 2   NLNQFAETHEVTNQPPPLDGANLYRIDVPLQDWSSRFGAGWAQPRIDAYGALAGGP-LMA 60

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              +AN + P+  ++   G R D VEFHPA+H L+  +I  G+    W        +  A
Sbjct: 61  AGFLANRHKPEFASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT-----YPQPGA 115

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
           H  RAA  YL  Q + G     ++T AS+ AL   P + + W PK+ S EYDP N     
Sbjct: 116 HVARAAMSYLHTQADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAH 175

Query: 193 KTSVAIGLGLTEKRG 207
           K    IG+ +TEK+G
Sbjct: 176 KNGATIGMAMTEKQG 190


>gi|330797571|ref|XP_003286833.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
 gi|325083206|gb|EGC36665.1| hypothetical protein DICPUDRAFT_77698 [Dictyostelium purpureum]
          Length = 422

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 119/307 (38%), Gaps = 32/307 (10%)

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    + +  + + P + S                     LTE   G+D A +  + +K+
Sbjct: 127 IYYCGSEQQKEKYLPDLASM-------------KKIGAFALTEPNAGSDAAGLQCKAKKV 173

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLV-PRLLEDGSPNGLCYQRLKNK 278
             G       +W  ++P +D  ++ A+     ++  F+V P+ +   +  G   + +KNK
Sbjct: 174 DGGWLLTGEKRWIGNAPFADVIVVWARNVDTNKIHGFIVEPKTV---NQKGCRIETIKNK 230

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           I  RS     + F N F      L ++     GP   +  L  +    +++     +  +
Sbjct: 231 IALRSVQNGHIYFDNCFIREDQRLPLANDFNSGPGRCLF-LTRVVVGWIALGIASNAYEK 289

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
            + Y + R   G  L    +++  +  +  +I A   +  R+++ ++++K    +A   +
Sbjct: 290 CLEYVKNRQQFGQPLAQFQIIQDRLVKMMGNIQAIALMCIRVSSLYEQSKLTLGQAGLLK 349

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLD 453
             A          A  V++ A EC GG+G + +   I R++ +        G+ +   L 
Sbjct: 350 AFASA-------KAREVVSLARECFGGNGILLDQGGIGRNFVDIEGVYTYEGTYDINTLV 402

Query: 454 VLNLLEK 460
               + K
Sbjct: 403 AGREITK 409


>gi|145589569|ref|YP_001156166.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047975|gb|ABP34602.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 389

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 111/362 (30%), Gaps = 37/362 (10%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           ++ D    +  A+   + ++   G   ++    +       A           +      
Sbjct: 31  QKIDHERDYPEAFVDAMTKA---GWLAALIPEEYGGSGLGLAEASVIMEEINFSGGN-SG 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                + +   +    +    K + PKI + E                 + +TE   GTD
Sbjct: 87  SCHGQMYNMGTLLRHGSEAQKKMYLPKIAAGELR------------LQSMAVTEPSTGTD 134

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE--- 263
              + +   K  D         W      SD  I+LA+       +     +   +    
Sbjct: 135 TTKLKTTAVKKGDNYVVNGQKVWISRIQHSDLMILLARTTPISEVQRKSEGMSIFIVNLK 194

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDS 320
           D    G+  + + N + N    T E+ F N       L+G        + D         
Sbjct: 195 DAIGKGMEVRPIAN-MVNH--ETNEVFFDNLEIPVENLIGTEGQGFKYILDGLNAERTLI 251

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +      +  A  YA  R V    +     ++  IAD  ++  AA  + F+    F
Sbjct: 252 AAECIGDAYWFIDRARRYANDRVVFDRPIGKNQGIQFPIADSYIETEAANLMRFKACELF 311

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  +    EA  A+ +A    +             ++  GG G+  E  + R +RE+   
Sbjct: 312 DNHQPCGPEANMAKFLAAKASW-------EAANVCLQTHGGFGFANEYDVERKFRETRLY 364

Query: 441 SI 442
            +
Sbjct: 365 QV 366


>gi|218295669|ref|ZP_03496465.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
 gi|218243828|gb|EED10355.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23]
          Length = 385

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/403 (15%), Positives = 128/403 (31%), Gaps = 38/403 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI----------HDGLHCSI 119
             +   + +  TP+         R+ + E  P       + +            G     
Sbjct: 1   MLDFYALEDLLTPEEKEIQKAARRFLEKEALPHIRDWWEKGVFPTHLIPRFGEMGFLGPT 60

Query: 120 WDRSFEPV-VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
               +    V   A+ + A  L  +           S      +    +    +++ P++
Sbjct: 61  LPPEYGGAGVTSAAYGLMAYELERVDSGLRSFASVQSSLVMYPIYAFGSEAQKREFLPRL 120

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSS 237
              E             +    GLTE  GG+D    + ++ +   D         W  + 
Sbjct: 121 ARGE-------------LVGCFGLTEPDGGSDPHGNMKTKARLEGDTWVLTGTKMWITNG 167

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
            ++   I+ A+ E       V   +      G   + +K+K+  R++ T EL        
Sbjct: 168 NLAHIAIVWAKDEAGR----VLGFIVPTDSKGFQAREVKHKMSLRASVTSELILDEVRVP 223

Query: 298 LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
               L  + G    +  L       A  ++  +     EA+ +A  R+  G  +  + ++
Sbjct: 224 ESLRLPKAEGLKAPLSCLTQARFGIAWGAMGALEAVYTEAVAFAGSRYTFGEPIAKKQLV 283

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  +A++         L++RLA   DE K +  + + A+           K A      A
Sbjct: 284 QAKLAEMLAWHTEGLLLAWRLARLKDEGKLKPAQVSLAKRQ-------NVKKALEAARLA 336

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + +GGSG   E    RH           G+ +   L +   +
Sbjct: 337 RDILGGSGITLEYHAIRHMLNLETVYTYEGTHDIHTLVLGREI 379


>gi|315445416|ref|YP_004078295.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263719|gb|ADU00461.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 412

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 127/436 (29%), Gaps = 46/436 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG---ER 93
           ++    L  L+A   + +  E++ L         + +    +        +  GG     
Sbjct: 3   FTLPDYLPGLLAEMDAFIEAEIKPL-------EREHIQYFDHRREHARTDWDNGGVPRRE 55

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLE 147
           W+++        + RR+   G         F                  A  L L   L+
Sbjct: 56  WEELL-----DEMRRRADAAGWLRYGLPSQFGGRDGSNLDMAVIREHLAAKGLGLHNDLQ 110

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +     M+    T    ++W   + +                ++  GLTE   
Sbjct: 111 DESSIVGNFPQVIMMDRFGTEEQKREWTDALVTG-------------KRSMAFGLTEPNH 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDG 265
           G+D   + +   +  D  + ++G K F +        ++ A+  G  G    +   L   
Sbjct: 158 GSDATWLETTAVQDGDE-WIINGAKRFNTGVHRATHDLVFARTSGEAGQARGITAFLVPC 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              G           N      E+   N     G +LG+++      +       +  A 
Sbjct: 217 DSPGFTVPYYWWTF-NMPTDHGEVLLENVRVLSGAILGEVDRGLEVGQTFLHENRIRQAA 275

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+   +  +  A+ YA  R V G  L     ++  + ++  +      L    A+  D 
Sbjct: 276 SSLGAAQYCIDRAVAYANDRKVFGKPLATHQAVQWPLVELQTEAQMVRLLVRYAASELDR 335

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                           +  Y   ++       AM+  GG GY         YR      I
Sbjct: 336 NHHME-----VSDKVSMANYRANRLVCEAADRAMQVFGGVGYSRHEPFEHIYRHHRRYRI 390

Query: 443 LLGSGNAMVLDVLNLL 458
             G+    +  V   L
Sbjct: 391 TEGAEEIQIRRVAQRL 406


>gi|256394661|ref|YP_003116225.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360887|gb|ACU74384.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 397

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 120/377 (31%), Gaps = 42/377 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMV 162
             LL      GL   ++    +      A  +   R  L     EA   ++        V
Sbjct: 42  RPLLAAMGRHGLLARLFPGGADGRAEAAALDLCLLRESLAQVSTEAETALALQGLGTYPV 101

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--- 219
               T      W PK+ + E                   L+E   G+D A+++       
Sbjct: 102 VQSGTQEQIAHWLPKVVAGE-------------AVAAFALSEPGSGSDAASLSLAATPAG 148

Query: 220 -------------KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
                        + S+G        W  ++P +D + + A+     G   V   L    
Sbjct: 149 SGSGSGAAPGSGSESSEGWTLNGEKIWISNAPEADFYSVFARTTPDAGARGVTAFLVPAD 208

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+      + I         + F N       LLGD++           L        
Sbjct: 209 RPGVG-GEHLDMISPH--PIGRVTFDNVPVTRADLLGDVDQGFRVAMRTLDLFRPSVGAF 265

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V   + +L  +I +A RR   GG+L D   +   +A++A    AA  L +  A ++D  
Sbjct: 266 AVGMAQAALDASITHAGRREAFGGVLKDLQAVSHNLAEMATRTEAARLLVYSAAEAYDSG 325

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           + R    +       + K +  + A  VI  A++  G     +   +   YRE  A  I 
Sbjct: 326 EKRIAGRS------AMAKLFATETAQFVIDAAVQIHGALALQQGHLLEHLYREVRAPRIY 379

Query: 444 LGSGNAMVLDVLNLLEK 460
            G+       +   L +
Sbjct: 380 EGASEVQRTIIGRELYR 396


>gi|325000682|ref|ZP_08121794.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 428

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 139/415 (33%), Gaps = 32/415 (7%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
             D+  F      L  +    GL  +            Q        +    +   G   
Sbjct: 33  DLDRPTFDRITAPLKEQVREQGLWAAHLPPELGGGGFGQVSLGLMHEILGRCRYAPGIFG 92

Query: 153 --SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
             +P   +A ++AL  T    + W               P+ +  +     +TE   G D
Sbjct: 93  NQAPDSGNAELLALGGTAEQKERWM-------------HPLLRGELRSCFSMTEPGAGAD 139

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268
              +T++  +  D  Y + GHKWF S+  + D  I++   +     +     ++      
Sbjct: 140 PTMLTTRAVRDGDE-YVIDGHKWFSSNATASDFLIVMVVTDPDAPPYQRASMIVVPTDTP 198

Query: 269 GLCYQRLKNKI------GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
           G+   R    +      G       E+ +         L+G+        +       + 
Sbjct: 199 GVDVARDIPVMDHPEVGGELYGGHAEVFYRGVRVPAENLVGNEGDGFRLAQQRLGPGRIH 258

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A+  +   + +       A  R  SG  L D+ +++  IA  A ++ AA  L+ + A +
Sbjct: 259 HAMRWLGQSQRAFDMLCERAVSRTASGSRLADKQMVQDMIATSAAEMQAARLLTLQAAWT 318

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D        A+ AR+   + KYW  ++   VI  A++  G  G+  +  + + YR + A
Sbjct: 319 MDR-----VGASNARVEIGMIKYWGARVLHDVIDRAIQVHGSLGFSGDLPLEQMYRAARA 373

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494
             I  G        V   + +G    E     +    G++  K    L  + +  
Sbjct: 374 ARIYDGPDEVHKESVARRILRGYTPVEVPTEHVPTRTGAARAKFAEYLETATADA 428


>gi|254237074|ref|ZP_04930397.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719]
 gi|126169005|gb|EAZ54516.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719]
          Length = 642

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 127/350 (36%), Gaps = 45/350 (12%)

Query: 30  LFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT-----PQL 84
               M    +D      + + P++  + L  L E + + TA  +   A   T     P  
Sbjct: 7   PLRDMRFLLND------VFDAPALWQR-LPRLAERIDADTADAILEEAAKVTGGLLAPLN 59

Query: 85  HAYGPGGERWDK--VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
            +    G +W    V     +          G      + +   +   +   ++   +  
Sbjct: 60  RSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMY 119

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A        + S  +   +    +  +   + P +++  +             A  + L
Sbjct: 120 AANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW-------------AGSMCL 166

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------ 251
           TE   GTD+  I ++ +  +DG Y +SG K F++    D       ++LA++        
Sbjct: 167 TEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSR 226

Query: 252 RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306
            +  FLVP+ L       G+ N +    +++K+G +++AT  + F    G+L+G++N   
Sbjct: 227 GISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGL 286

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +  M     L   I  +    +S   A+ YAR R        D+P  +
Sbjct: 287 AAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQ--KPRADRPGGQ 334


>gi|295695901|ref|YP_003589139.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
 gi|295411503|gb|ADG05995.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912]
          Length = 388

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 130/385 (33%), Gaps = 46/385 (11%)

Query: 80  NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH-----------DGLHCSIWDRSFEPVV 128
           N  +L+     G R    +F  ++   L +               G   ++    +    
Sbjct: 5   NQAELYEDLRRGVRKVCEKFPDSYWRALDQERAYPEEFVNALTQAGYLAALIPEEYGGAG 64

Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
                +       +             + +   +    +    + + PKI          
Sbjct: 65  L-GITEASIILEEVNRSGGNAGACHAQMYTMGTLLRHGSEEQKRKYLPKIADG------- 116

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247
                T      G+TE   G+D   + +   +  D  Y ++G K F+S +  SD  ++L 
Sbjct: 117 -----TLRLQAFGITEPNTGSDTTQLKTTAVRKGD-KYIVNGQKVFISRTEYSDLMLLLV 170

Query: 248 QVEG----RVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--- 297
           +       +     +  LL D       GL  + ++  + N S  T EL           
Sbjct: 171 RTTPVDQVKKRTEGLSVLLVDLREAVGKGLTIRPIRTMM-NHS--TTELFIEGLEVPAEN 227

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G+       + D      +  A   +   R  +  A+ YA++R V    +     ++ 
Sbjct: 228 LIGEEGKGFRYILDGMNAERILIAAECIGDGRWFIDRAVGYAKQRVVFNRPIGQNQGIQF 287

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A   +++ AA  + F+ A  FD  +    +A  A+++A    +            A++
Sbjct: 288 PLARAYVNVEAADLMRFKAAELFDSGQPCGAQANMAKLLAADASW-------EAANVALQ 340

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG G+ EE  + R +RE+    +
Sbjct: 341 THGGFGFAEEYDVERKFRETRLYQV 365


>gi|9757682|dbj|BAB08201.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 428

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 137/366 (37%), Gaps = 31/366 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF   +HA+ + S   G+          P +   A  I  A +  +    +  ++ 
Sbjct: 77  WEKAEFP--FHAIPKLS-SLGVAGGTIKGYGCPGLSITASAITMAEIARVDASCSTFILV 133

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +AL  +    + + P +              + +      LTE   G+D ++
Sbjct: 134 HSSLAMVTIALCGSEVQKQKYLPSL-------------AQLTAVGCWALTEPNHGSDASS 180

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G +     +W  +S  +D  ++LA+             +      GL   
Sbjct: 181 LITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNG---FIVRKGAPGLKAT 237

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +++NKIG R     ++ F+  F      L       +  K+   L  + + V+   + ++
Sbjct: 238 KIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVNSFQDISKV---LAISRVMVAWQPIGIS 294

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             +     R   G  L+   + +  +  +  +I A   + +RL   ++  K         
Sbjct: 295 MGVFDVCHRKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGK-------MT 347

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVL 452
              A + K W  +MA  V++   E +GG+G + +  +A+ + +  P  S   G+ +   L
Sbjct: 348 PGHASLGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAFCDLEPIYS-YEGTYDINSL 406

Query: 453 DVLNLL 458
                +
Sbjct: 407 VTGREI 412


>gi|332795998|ref|YP_004457498.1| acyl-CoA dehydrogenase domain-containing protein [Acidianus
           hospitalis W1]
 gi|332693733|gb|AEE93200.1| acyl-CoA dehydrogenase domain-containing protein [Acidianus
           hospitalis W1]
          Length = 386

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 133/390 (34%), Gaps = 40/390 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L      G   D +            +   GL    +                AA   
Sbjct: 26  PRLREIDEKGIPKDFIL----------DASKIGLWSLTFSEDVGGQHASFTLASIAAEEI 75

Query: 142 LMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199
             A       +   + ++   ++    +  + K+  PK+ S E               +G
Sbjct: 76  ARADFTMATAVFFLLENSWGYVLDKYGSEELRKEVLPKVASGENF-------------LG 122

Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRVG 254
           +  TE  GG+D+A + +  +K   G Y ++G K ++S       M    + L +  G  G
Sbjct: 123 IASTEPSGGSDVANLKTSAKKEE-GKYVINGEKAYISGVMEAKEMGGGHLTLVRT-GGKG 180

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVED 311
              +  +    +  G+   R++N +G    +T  +++ N      FL+G+ N       D
Sbjct: 181 HKGISMIYVPINSEGITVSRIEN-MGRMGISTGIIKYDNVRIDEKFLVGEENKGFYYAMD 239

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 +  A   +      L E + Y + R   G  L D   +    A++   +  A  
Sbjct: 240 GFNHARVLVASACIGSAEAILEEGLKYIKEREAFGVKLKDLQSIAFEAAELYTKLEMARL 299

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           L ++ A   D  +   +E       + + K    + A  VI   M   G  GY ++  I 
Sbjct: 300 LVYKSAWMLDHEEKFKDEI---PKFSAMAKLIAPQTAFDVIKSVMIWFGAYGYTKDALIE 356

Query: 432 RHYRESPANSIL-LGSGNAMVLDVLNLLEK 460
              R   +  +   G+ N M L +   + K
Sbjct: 357 SGMRGLMSYLVGAEGALNIMKLIISREILK 386


>gi|198244664|ref|YP_002214823.1| acyl-CoA dehydrogenase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197939180|gb|ACH76513.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326622576|gb|EGE28921.1| acyl-CoA dehydrogenase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 387

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+ + +P     + +    G   ++    F         +       +     
Sbjct: 25  DKYHRKIDEAKAYPE--EFVNKLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I + E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWR------------LQSMGVTEPTA 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAIKREDRYVITGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  + + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+      +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQHLDCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|297163260|gb|ADI12972.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1]
          Length = 402

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/363 (19%), Positives = 128/363 (35%), Gaps = 35/363 (9%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           P    L   +    +        +  +      QA    AA   L+  L A +  +P   
Sbjct: 45  PLRRRLQGAAREARVFAPHVGAKWGGLGLDLCGQAVVFEAAGYSLLGPL-ALNCAAPDEG 103

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAIT 215
           +A ++ ++ T +  + +               P+    V     +TE     G+D  A+T
Sbjct: 104 NAHLLEVVATEQQQERYL-------------RPLAAGEVRSCFAMTEPAPGAGSDPRALT 150

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQ 273
           +   K  DG + + G KWF+S     AF I +A+  G  G        L D    G+   
Sbjct: 151 TTATKT-DGGWRIDGRKWFISGADGAAFAICMARTCGGPGDAGGATMFLVDADNPGMKIV 209

Query: 274 RLKNKI--GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           R  + +  G     + E+ F         +LG+++      +       +   +  +   
Sbjct: 210 RNIDTLDQGLFGGHS-EIVFEGCEVEDTAVLGEVDQGFAYAQVRLGPARMTHCMRWLGVA 268

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+  A  R   G  L +  ++++ +AD  +DI    A+ +R     D+ +    
Sbjct: 269 RRAQDIALERAADRSAFGKPLAELGMVQQLLADSEIDIETGRAVLWRACWELDQGRP--- 325

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A     I K +  +    V+  A++  G  G   +  ++R YRE     I  G   
Sbjct: 326 ----AAQHTSIAKTYVSEAVNRVVDRAVQICGALGISGDTPLSRLYREVRPFRIYDGPSE 381

Query: 449 AMV 451
              
Sbjct: 382 THR 384


>gi|145225047|ref|YP_001135725.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217533|gb|ABP46937.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 412

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/436 (14%), Positives = 126/436 (28%), Gaps = 46/436 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG---ER 93
           ++    L  L+A   + +  E++ L         + +    +        +  GG     
Sbjct: 3   FTLPDYLPGLLAEMDAFIEAEIKPL-------EREHIQYFDHRREHARTDWDNGGVPRRE 55

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLE 147
           W+++        + RR+   G         F                  A  L L   L+
Sbjct: 56  WEELL-----DEMRRRADAAGWLRYGLPSQFGGRDGSNLDMAVIREHLAAKGLGLHNDLQ 110

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +     M+    T    ++W   + +                ++  GLTE   
Sbjct: 111 DESSIVGNFPQVIMMDRFGTEEQKREWTDALVTG-------------KRSMAFGLTEPNH 157

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDG 265
           G+D   + +   +  D  + ++G K F +        ++ A+  G  G    +   L   
Sbjct: 158 GSDATWLETTAVQDGDE-WIINGAKRFNTGVHRATHDLVFARTSGEAGQARGITAFLVPC 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G           N      E+   N       +LG+++      +       +  A 
Sbjct: 217 DSPGFTVPYYWWTF-NMPTDHGEVLLENVRVPSGAILGEVDRGLEVGQTFLHENRIRQAA 275

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+   +  +  A+ YA  R V G  L     ++  + ++  +      L    A+  D 
Sbjct: 276 SSLGAAQYCIDRAVTYANDRKVFGKPLATHQAVQWPLVELQTEAQMVRLLVRYAASELDR 335

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                           +  Y   ++       AM+  GG GY         YR      I
Sbjct: 336 NHHME-----VSDKVSMANYRANRLVCEAADRAMQVFGGVGYSRHEPFEHIYRHHRRYRI 390

Query: 443 LLGSGNAMVLDVLNLL 458
             G+    +  V   L
Sbjct: 391 TEGAEEIQIRRVAQRL 406


>gi|218780165|ref|YP_002431483.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761549|gb|ACL04015.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 396

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 110/279 (39%), Gaps = 20/279 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR 252
            S    + +TE   G+D  +I +      D  + L+G K F++ +   DA ++ A V+  
Sbjct: 119 GSKWAAMAITEPGSGSDAGSIQTTAVLDGDE-WVLNGEKIFVTCADRCDAVVVWANVDPS 177

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVE 310
            G   +   + +    G   ++L++K+G R++ T      +        L         E
Sbjct: 178 AGKAGIKSFIVEKGTPGFTLEKLEHKLGIRASDTGTFFLKDCRIPKDNILGSAEVKKSTE 237

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILIDQP-------VMKRAIAD 361
             K ++   D+    V+ M   +A A + + +++    GI +D          M++    
Sbjct: 238 GFKGVMKTFDNTRPMVASMSNGVAGASLEFLKQKMEEAGIALDYNENTNNVSAMQKEYYM 297

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  ++ A   L+++ +   DE    + EA+ ++  A        +    +  +  E +G 
Sbjct: 298 MEANLEAMRLLTYKASWMADEKIFNNVEASMSKAKAG-------RAGTLITQKVCELLGS 350

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            G+  E    +  R+S    I  G+G    L V   + K
Sbjct: 351 MGFTREHLAEKWMRDSKILDIFEGTGQIQHLIVARNILK 389


>gi|325000435|ref|ZP_08121547.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1]
          Length = 394

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 110/365 (30%), Gaps = 29/365 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLEAGHLMSPSVTSASMVA 163
            L+ R    GL      R +  +      ++     +  A  +      +     +  + 
Sbjct: 43  RLVERMAELGLFGISIPREYGGLGWTMTEQVLLTLEFTRASCVYRSRFSTVIGLCSQAIL 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T     +  P             PM          LTE   G+D  ++ +   + ++
Sbjct: 103 SHGTDEQRSELLP-------------PMAAGRRVTSFALTEPEAGSDATSLQTTADRTAE 149

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G       ++  ++  +D  ++ A+         +   + D + +G+  +      G+  
Sbjct: 150 GWVLHGAKRYITNAHWADTLLVFARTAPEE----ISAFVVDTTLDGVTTRLPALMNGHED 205

Query: 284 NATVELEFSNTFGF----LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
               E+            L G                 L  A  +V      L E   + 
Sbjct: 206 APVAEIGLDGVVVPADRLLGGTTGAGMKAAMRGINHARLHVAATAVGQATRILEETTAHV 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
            +R   G  L D  V++  +     ++ A  AL    A+ FD         A  R     
Sbjct: 266 GQRRQFGAPLADLGVVQAELGRCYSEMEAGRALVMDAAHGFDAG-------AVPRQRISA 318

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
            K +C +M   V    ++ +GG G +    + R +R+     I  G+      ++   + 
Sbjct: 319 AKLFCTEMVGRVADRCVQLLGGEGIVGGHPVPRMWRDVRTLRIYEGASAVHERNLGRAMV 378

Query: 460 KGTNL 464
           +    
Sbjct: 379 RSMEA 383


>gi|289706824|ref|ZP_06503167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289556509|gb|EFD49857.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 400

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/404 (16%), Positives = 133/404 (32%), Gaps = 33/404 (8%)

Query: 58  LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           L+  GE           R   Y    L         WD+ E+      L+ R+    L  
Sbjct: 20  LDAFGE-ATDEDRAHWDRARAYGQEVLERIDGH---WDRAEYP---LDLVARAGELDLLT 72

Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177
              +     V+   A  + A  +       A             +     P   + +   
Sbjct: 73  DGLEVPGHAVMSPLAAGLVAMEISRADGSMAAAAAVQGGLVLRALVHCAGPEQKERYLE- 131

Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLS 236
                       P+ + ++  G  LTE   G+D  ++ +  +  + G + L+G  KW  +
Sbjct: 132 ------------PVARGTLPGGFALTEPLHGSDSVSLETSARPDAAGGWVLNGAKKWIGN 179

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
                  I+ A+             + + S  G   + +  K   R+    E+  ++   
Sbjct: 180 GAAGGITIVWARDTEDGQVKG---FVVEQSTPGYEAEVITGKGALRAIHQAEITLTDVRV 236

Query: 297 FLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                L       +  ++L    ++    ++         A+ YAR+R   G  L    +
Sbjct: 237 GDDARLPNVATFKDAARVLVATRVNVGWSALGHATAMFEAALAYARQREQFGKPLAAHQM 296

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           ++  +A +  ++ A       +A      + R E+A+         KY C + A  V   
Sbjct: 297 VQERLAQMLDEVTAMQTRCVAVARLQAAGRLRDEQASLL-------KYACTRGARRVAQI 349

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A + +GG+G + E  + RH+ +  A     G+ +   L +   L
Sbjct: 350 ARDMLGGNGILLEHRVMRHFADVEALHTYEGTESVQALILGRDL 393


>gi|241762767|ref|ZP_04760831.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241368186|gb|EER62378.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 384

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 123/362 (33%), Gaps = 30/362 (8%)

Query: 99  FHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLMSPSV 156
             P +           GL    +  +         H + A      A    A  + + + 
Sbjct: 33  HSPHYPWDAAALLAEQGLLGIAFPEADGGQGGTLMHAVLAIEQIAQACPKSADIVQAGNF 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                     TP   + + P + +                 I LG+TE   G+ +  + +
Sbjct: 93  GPIRTFVEYATPEQKERFLPDLLAG-------------RKLISLGMTEPDAGSAVTELKT 139

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
             ++  D  Y ++G K F +  P ++ F++  +    VG   +  +L +    G      
Sbjct: 140 SARQDGDH-YIINGSKIFSTHSPEAELFLIYVRFGPGVG--GIGSVLVERGTPGFQVGTP 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLA 333
            N +        +L F +        L    G  +      +  L ++  +++  R +  
Sbjct: 197 SNFM--NGEQWSQLYFEDCRIPAANVLLGPGGFKKQISGFNVERLGNSSRALALGRYAFN 254

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +A  R   G  L +   ++   AD+A+ +  A  + +R A   +     ++  A A
Sbjct: 255 AAREHALTRKQFGRELCEFQGLQWKFADMAMKLEQAQLMLYRAAMEGEHGLPSAQSTAMA 314

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++   +  +        V  +A++ +GG G+ +E  +    R +    I  GS   +   
Sbjct: 315 KLACNMAGW-------DVSNDALQVMGGMGFSQESLVEYCVRRTRGWMIAGGSIEILKNR 367

Query: 454 VL 455
           + 
Sbjct: 368 IA 369


>gi|33603674|ref|NP_891234.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33577799|emb|CAE35064.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 391

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 134/383 (34%), Gaps = 36/383 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--- 148
              D+ +  P      +     GL  +   +                         A   
Sbjct: 29  HDLDRRKAFP--QECWQAICDAGLAGAALPQEHGGSGLGMLDLALIVEELSAGGGGATLG 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M   +     ++   + ++ ++  P +   + +               + LTE   G
Sbjct: 87  QLFMINPIFGGVPISKFGSEQMKRELLPALVGGKMN-------------FCMALTEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQV----EGRVGCFLVPRLLE 263
           T+  A+ S  +    G + L+G K ++++  +    +++A+     EG      +   + 
Sbjct: 134 TNTLAMKSYAEAEPAGGWRLNGRKIWITAVDAAQKMLVVARTSRQAEGARPSDGISMFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           D    GL Y  + +K+G ++ +   + F N       L+G L+     + D+     + +
Sbjct: 194 DVEREGLSYSAI-DKVGTQTLSACSVFFDNVRIEPHELVGTLDKGFRELLDVLNTERIVT 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
               +   R++   A+ YA  R V  G  +     ++  +A    ++  A  ++ + A  
Sbjct: 253 TASLIGAGRLAKRLAVQYANDRKVFGGKPISSYQGLQFPLAQSHAELQCARLMNLKAAAL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+      E       A I K    + A   I  +M+ +GG GY  E  + R +R++  
Sbjct: 313 CDQGLPYGTE-------ANIAKLIGSQAASHAIERSMQTMGGMGYAREFHVERLWRDARL 365

Query: 440 NSILLGSGNAMVLDVLNLLEKGT 462
                     M+L+ + + + G 
Sbjct: 366 FK-FAPVSEEMILNYIAIHDLGM 387


>gi|319763888|ref|YP_004127825.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330823848|ref|YP_004387151.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317118449|gb|ADV00938.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329309220|gb|AEB83635.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 385

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 130/390 (33%), Gaps = 37/390 (9%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129
           A  +AR A                WD        +   +     GL    + ++      
Sbjct: 13  ADSVARFAREKLAAGALRRAHSHEWD--------YEAGQLIAEQGLLGIAFAQADGGQGG 64

Query: 130 KQAHKIRAARLYLMAQL-EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
              H + A     +A    A  +   +           TP     + P + S        
Sbjct: 65  TLMHAVLAIEQVALACPRSADIVQVGNFGPIRTFVEYATPEQKARFLPGLLSG------- 117

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
                    I LG++E   G+ +  + +  ++  D  Y ++G K F S    +D F++  
Sbjct: 118 ------QKLICLGMSEPEAGSAVTELKTTARQEGDE-YVINGSKVFSSHGLEADLFLIYV 170

Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307
           +    VG   +  +L +    G    +    +        +L F N        L  + G
Sbjct: 171 RFGPGVG--GIGSVLLERGMPGFSIGQPTRFM--NGEQWGQLYFDNVRVPARNLLLGAGG 226

Query: 308 PVED--MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
             +      +  L +A  +++  R     A  +A +R   G  L +   ++   A++A+ 
Sbjct: 227 FKKQISGFNVERLGNASRALACGRYCFNLAREHALQRKQFGRTLAEFQGVQWKFAEMAMK 286

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
           +  A  L ++ A   +     ++  A A++   +  +        V  EAM+ +GG G+ 
Sbjct: 287 LEQAQLLLYKAAMEGEHGLPSAQSTAMAKLACNLAGW-------EVSNEAMQVMGGLGFT 339

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455
           ++  +    R +    I  GS   +   + 
Sbjct: 340 QDLLVEYCVRRTRGWMIAGGSIEILKNRIA 369


>gi|301512937|ref|ZP_07238174.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
          Length = 401

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCPVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|239945037|ref|ZP_04696974.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|239991499|ref|ZP_04712163.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379]
 gi|291448494|ref|ZP_06587884.1| short/branched chain specific acyl-CoA dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
 gi|291351441|gb|EFE78345.1| short/branched chain specific acyl-CoA dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
          Length = 394

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 131/361 (36%), Gaps = 26/361 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA-QLEAGHLMSPSVTSASMVAL 164
           L  R   +GL      R +          I             A  +   +V  A  +  
Sbjct: 53  LRERLFAEGLMSVEIPRGYGGTGGTLCQLILTIEEVARVDPGVAVGVHVHNVLVAGTLLR 112

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +    + + P++               T       L+E++ G+D  A+T+  ++   G
Sbjct: 113 HASGDQRRQYLPQL--------------ATGKIGAFALSEEQAGSDAFALTTVARQDEGG 158

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  +W  ++  +D  ++ A  +           +      G+       ++G R+ 
Sbjct: 159 YLLTGRKRWTSNARNADLLLVFALADAGGP----TAFVVPADAPGVSLDDRVEQMGVRAA 214

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           AT ++ F  T       +    G          L  L  A       + +L  A  Y+R 
Sbjct: 215 ATSDVIFDGTPVRTAQRVGPPGGGQTVALSGLGLGRLGIAAQMTGLAQGALDAATGYSRV 274

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   GG + D   +   +AD+A  +AAA AL +R  +         E       +A + K
Sbjct: 275 REQFGGRIADHQGVAFPLADVASRLAAARALLYRAVDLHGRGTDPVE----LMRLAAMAK 330

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
           Y   ++A    + A+E +GG+GY +   + R YR++ A  I  G+ N ++  + +++  G
Sbjct: 331 YVASEVAERAASVAVETLGGNGYTDAYPVERFYRDAKAGKIYEGTSNVLLRTIASIMIGG 390

Query: 462 T 462
           +
Sbjct: 391 S 391


>gi|121592664|ref|YP_984560.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604744|gb|ABM40484.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
          Length = 399

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 134/380 (35%), Gaps = 46/380 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL----YLMAQLEAGHLMSPSVTSAS 160
            L+ R+   GL      R    +    +H  +A       Y      A ++ +P   +  
Sbjct: 45  ELVSRARAAGLLTPHASRDMGGLGL--SHVAKAVVFEEAGYSWLGPTALNIHAPDEGNIH 102

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQG 218
           ++  + TP   + W     + ++                  +TE     G D + + +  
Sbjct: 103 LMEEVATPAQKERWLRGQVAGQWR-------------SCFAMTEPAPGAGADPSMLATTA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            +  D  Y ++G KWF++      + I++A++E R         L D    G+  +R  +
Sbjct: 150 VRDGDD-YVINGRKWFITGAEGAHYAIIMARMEDRSA----TMFLTDMDRPGIVLERNMD 204

Query: 278 KI-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +     G        L F N       +LG++       +       L   +  +   R
Sbjct: 205 AMDSCFTGGHG----VLRFDNLRVPASDVLGEIGKGFRYAQVRLAPARLTHCMRWLGQAR 260

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YAR+RH  G  L +   +   +AD  +D+  A    +  A   D+ +  + E
Sbjct: 261 RAHDTALAYARKRHAFGKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWMLDQGEKCNFE 320

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           ++ A+++    ++        V+  +++ +GG G   E  + R + +  A  I  G    
Sbjct: 321 SSRAKVVCSEAEW-------RVVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEV 373

Query: 450 MVLDVLNLLEKGTNLFEQLF 469
               +   L       E   
Sbjct: 374 HRWSMARKLVHMAEKAEAEL 393


>gi|324997562|ref|ZP_08118674.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 388

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 118/346 (34%), Gaps = 26/346 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
                     G         +        H    +   L+ +  A      +  SA  + 
Sbjct: 39  KEFYDTLAAGGWLGITTPEEYGG------HGYGISEAALLIEEVAKSGGGMNAASAIHLT 92

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           +     V K       S E        +   S+ +  G+TE   G D   IT+  ++  D
Sbjct: 93  IFGMHPVIKHG-----SEEMKRRTLPGVVDGSLHVCFGVTEPGAGLDTTKITTFAKREGD 147

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                    W   +  SD  ++L + E           +   L D   + +  + +  K+
Sbjct: 148 RYRVNGRKVWISKAMESDKVLLLTRTEKADQVARKTDGMTLFLTDIDRDRIDVRPIP-KM 206

Query: 280 GNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G  +  + EL   +    +   +G+       + D      +  A  ++   RV+L  A 
Sbjct: 207 GRNAVTSNELFIDDLMIPVEDRVGEEGKGFTYILDGLNPERMLVAAEALGLGRVALDRAT 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y   RHV G  +     ++  +AD    + AA  +  +    +D+ +    EA  A+ +
Sbjct: 267 RYGNERHVFGRPIGMNQGLQFPLADSLAKLDAAELVLRKATWLYDKGEHCGREANTAKYL 326

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  C +        A++  GG GY EE ++AR++RE+    I
Sbjct: 327 -------CAEAGFEAADRALQTHGGMGYSEEYNVARYFREARLLKI 365


>gi|158521563|ref|YP_001529433.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510389|gb|ABW67356.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 384

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 121/373 (32%), Gaps = 27/373 (7%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G   +K   +PA   +L  +   G     +   +                        G 
Sbjct: 29  GLDLEKERAYPA--EVLAAACDLGFIGIHFPEKYAGADLGLFENCLIGEELCRKDSTLGL 86

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +   A  +    +    + + P              + +          E   G D
Sbjct: 87  ALMLTGYGAECILRFGSEAQKEKYLP-------------VVAEGKAFSAAAFLEAGQGFD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSPN 268
           +  + +  +K +DG          L+   +  +++L + +         +   + D    
Sbjct: 134 LRTVQTTARKEADGWVISGAKSLVLNGGTAGFYVVLCRTDDAAPAPDGRLSMFVVDAGLP 193

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+  Q    ++     +  ++ F +       LLG        V      + +  A ++V
Sbjct: 194 GISCQDAGRRMSCNMLSAADVTFDSVKVGADALLGSEGKGFVQVNAYFNELRVVLAALAV 253

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +  +A+ Y ++R   G  L++  +    +A +A  I  A    +R A +FD+ K 
Sbjct: 254 GIAQGAYEKALAYIKQREQFGKKLVEFHITWHKVATMATQIECARTFVYRAAWTFDQGK- 312

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                     ++ + K    K A  V  EA++  GG G++ E  +   YR++    +  G
Sbjct: 313 ------LDAGLSAMAKMTAAKAAVDVAYEAIQLYGGYGFMTEYEVEHFYRDAKFIDLFCG 366

Query: 446 SGNAMVLDVLNLL 458
           +       +   +
Sbjct: 367 AVGVQKDVIAETI 379


>gi|103487177|ref|YP_616738.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977254|gb|ABF53405.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 387

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 119/361 (32%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R D+   +P     +R     G    +    +                   +    G  
Sbjct: 29  QRLDRERIYPT--EFVRTLTEAGFLSVLIPEQYGGSGLGLGAATAVLEEIHRSGCN-GGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + P I   E                  G+TE   GTD 
Sbjct: 86  CHAQMYTMGTLLKHGSEAQKQAYLPAIARGELR------------LQAFGVTEPTAGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSP 267
             I +  +K+ D         W   +  SD  ++L +   R         +  LL D   
Sbjct: 134 TRIRTFARKVGDKYVVNGQKIWISRAEHSDLMVLLCRTTPRDECAKPSDGMSVLLVDMRE 193

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
               GL  + L+  + N +  T EL F +       L+G+       +        +  A
Sbjct: 194 AVGKGLTIRPLRTML-NHA--TTELFFDDLEVPAANLIGEEGRGFRYILSGMNAERILIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   R  +  A  YAR R V G  + +   ++  IA   + IAAA  +  + A  FD
Sbjct: 251 SECIGDGRFFVDRATAYARDRSVFGRPIGENQGIQFPIARAYVQIAAAAEMVAKAARLFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EA  A+++A    ++   M        ++  GG G+ EE  I R +RE+    
Sbjct: 311 AGADCGTEANMAKMLASEASWYAADM-------CLQTHGGFGFAEEYDIERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|296270481|ref|YP_003653113.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296093268|gb|ADG89220.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 426

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/437 (17%), Positives = 147/437 (33%), Gaps = 45/437 (10%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
                    L          D   F      L ++    GL  +            Q   
Sbjct: 20  EFVREEIYPLETLD-----LDHHTFRRLARPLQQQVKEQGLWAAHLGPELGGQGFGQVKL 74

Query: 135 IRAARLYLMAQLEAGHLM--SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                +   + L        +P   +A ++AL  TP   + W               P+ 
Sbjct: 75  ALLHEILGASDLAPFVFGNHAPDSGNAELLALAGTPEQKERWL-------------YPLL 121

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG 251
           +  +     +TE   G+D   +T+  +   D  + ++GHKWF+ ++  +D  I++A  E 
Sbjct: 122 EGELLSAYAMTEPGTGSDPKQLTTSARLEGDE-WVINGHKWFVGNASRADFHIVMAVTEP 180

Query: 252 RV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS----NATVELEFSNTFGFLLGDLNVST 306
                  +  L+   S  G+  + L N           +  E+ + +         N+  
Sbjct: 181 EADPHHRMSMLIVPTSTPGIRMRELGNMHAPDGRHPLWSHCEVFYEDVRVP---RENLLG 237

Query: 307 GPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
           G  E   +         +  A+  +   R +       A    V G  L D+  ++  +A
Sbjct: 238 GRGEGFVLAQKRLGPGRIHHAMRWLGVSRRAFDMLCERAVSVSVHGSRLADKQTIQNWVA 297

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
           D A  + AA  L+ + A   D        A+ AR+   + KY+   +   VI +A++  G
Sbjct: 298 DCAAQMEAARLLTLQAAWRIDRYG-----ASNARLDISMIKYFGAAVMHDVIDKALQVHG 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480
             G+  +  + + YR S A  I  G      + V  LL +     E       + + +  
Sbjct: 353 SLGFSTDMPLEQMYRWSRAARIYDGPDEVHRVTVAKLLLRRYQPVEV----PTEHVPTRR 408

Query: 481 KKVITILRDSISLCKED 497
           +  +   +  + L  E+
Sbjct: 409 EAALRRFQAQLELLTEN 425


>gi|158520951|ref|YP_001528821.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509777|gb|ABW66744.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 399

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 20/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR 252
             + I    TE   G+D  AI++  Q   D  + L+G K F++ +   DA I+ A ++  
Sbjct: 122 GRLWIAFANTEPEAGSDAGAISTTAQLDGD-SWVLNGEKIFVTCADRCDAVIVWATLDKS 180

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN--VSTGPVE 310
            G   +   + +    GL   RL+NK G R++ T     +N        L         E
Sbjct: 181 AGKSGIKPFMVEKQTPGLTMTRLENKCGLRASDTGTFVLNNCRIPKENLLGSAKIEQTTE 240

Query: 311 DMK-ILIYLDSAIMSVSGMRVSLA-EAIHYARRRHVSGGILIDQP-------VMKRAIAD 361
             K ++   D     V+ M   LA  A+   R +    GI++D          M++A   
Sbjct: 241 GFKGVMKTFDMTRPMVAAMATGLAGAALDLVREKMEQNGIVLDYHGGPNAVSGMQKAFYR 300

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +   + A   L++R A   D  +  + EA+ A+  A        + A  +  E+ E +G 
Sbjct: 301 MEAHLEAMRQLTYRSAWMADNGQPNNLEASMAKAKAG-------RWATLIAQESCELLGP 353

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            G   +    +  R+     I  G+G    L +   +
Sbjct: 354 LGISTQELAEKWMRDVKIMDIFEGTGQIQHLIIARHI 390


>gi|284163305|ref|YP_003401584.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284012960|gb|ADB58911.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 388

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 110/367 (29%), Gaps = 33/367 (8%)

Query: 88  GPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-- 143
              G     +K E               G H  +    ++           A        
Sbjct: 21  DRYGPEHWREKEEAGEFSTEFWDELGEAGFHGLLVPEEYDGAGMGMEEMGLAMETLCAEG 80

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
                  +L+  +  +A  +    T    + +   I + E +               + +
Sbjct: 81  CGMAGTWYLVLTAGMAAVGLREYGTDEQKERYLTDIATGERN-------------FSIAI 127

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLV 258
           TE   GT+   + ++ ++  D         W   S  +D  I++ +   R     G   +
Sbjct: 128 TEPEAGTNTLNVATRAERDGDEYVLNGKKAWITFSDRADNMILVTRTTPRDEVERGTDGI 187

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              + D     +    +  K     + + E+   +       LLGD +     + DM   
Sbjct: 188 SLFVVDMDDPNIDVSPIP-KHAINYSKSCEVFIEDVRVPAENLLGDEDDGWWVLVDMLNP 246

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A       +++   AI Y+  R + G  +     +   I +    +  A  +  +
Sbjct: 247 ERIGFAAAGTGIGKLAANAAIEYSNDREIFGAPIGTHQAVSFPITEAYAKMETAALMREK 306

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D+ +    E         + K          +  AM+  GG GY +E  + R +R
Sbjct: 307 AAWLYDQGEECGYE-------TNVAKATAVDAGIEAVKHAMQAFGGWGYAKEYDVERWWR 359

Query: 436 ESPANSI 442
           E     +
Sbjct: 360 EINLTRL 366


>gi|107022741|ref|YP_621068.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116689690|ref|YP_835313.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105892930|gb|ABF76095.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647779|gb|ABK08420.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 388

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 119/367 (32%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    PA           G      D ++              R     
Sbjct: 22  RFGDDYWLERDRTGGFPA--DFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +T+Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLTTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDQVAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N   +   L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVSRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFQACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|301065005|ref|ZP_07205350.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
 gi|300440854|gb|EFK05274.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2]
          Length = 395

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/372 (16%), Positives = 122/372 (32%), Gaps = 32/372 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +K  F   W  ++       +        +      +        L   A    G + + 
Sbjct: 46  NKAVFPDEWSQIITALKEADIFKLFVPARYGNQKASEEDIYFMMELLGYASPGLGVVFAS 105

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
              +  ++ L  T      + P              M        + +TEK  G+D   I
Sbjct: 106 HGRAVDII-LQGTDAQKDQYLP--------------MMAEGAFGAIAMTEKSAGSDAGGI 150

Query: 215 TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
               +K   G Y  +G K F+S+  +++ + +LA  +G  G   +   + + S      +
Sbjct: 151 GLMARKNGAG-YLFNGEKIFISNSGLAEIYTVLANTKGVKGPRSLSLFIVESSTPNFTVR 209

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +L  K G +   T  L F +        +      +     +I  D   + ++G+   LA
Sbjct: 210 KLPEKDGLKILPTGRLIFEDAPVPGENLVGDEGRGLIGSVNVI--DRGKIHIAGICCGLA 267

Query: 334 -----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
                E  HY +RR      L     +   I+D+   + AA  L F              
Sbjct: 268 YRIFREVFHYVQRREQFDHPLTQSQDISFQISDMFTKMTAARGLCFHA--LKQIGTP--- 322

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
              Y  + +   K +  +M     + A   +GG GY +   + +   ++     L G+ N
Sbjct: 323 ---YYGLSSAQAKLFASQMVMETASRAQILMGGRGYFKNDLVNQLSSDARGMEYLEGTSN 379

Query: 449 AMVLDVLNLLEK 460
              + +   L +
Sbjct: 380 VQKMLIGKHLFR 391


>gi|302557750|ref|ZP_07310092.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302475368|gb|EFL38461.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 374

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 104/322 (32%), Gaps = 25/322 (7%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A  EA   ++     A  V    T      W P++                +      
Sbjct: 70  AHACTEAETALALQGLGAHPVHAHGTDAQRAHWLPRV-------------AAGTAVAAFA 116

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D AA++      +DG        W   +P +D + + A+     G   V   
Sbjct: 117 LTEPAAGSDAAALSLTATPAADGWRLSGEKCWISHAPEADFYTVFARTTPGAGARGVTAF 176

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      GL    L + +         L F         +LG+++       D   L   
Sbjct: 177 LVPADRPGLTGTAL-DMLSPH--PIGALAFDAVPVTADDVLGEVDRGFRVAMDTLNLFRP 233

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                +V   + +L   + +  RR   GG L D   +   +A++AL   +A  + +  A 
Sbjct: 234 SVGAFAVGMAQAALDATLGHTARRDAFGGKLKDLQSVAHQVAEMALRTESARLMVYAAAT 293

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++DE              + + K    + A  V+  A++  G         +   YRE  
Sbjct: 294 AYDEGAPD------VPRRSAMAKLLATETAQYVVDRAVQLHGARALQRGHLLEHLYREVR 347

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
           A  I  G+       +   L K
Sbjct: 348 APRIYEGASEVQRSIIAKELYK 369


>gi|163751276|ref|ZP_02158503.1| crotonobetainyl-CoA dehydrogenase [Shewanella benthica KT99]
 gi|161328873|gb|EDP99947.1| crotonobetainyl-CoA dehydrogenase [Shewanella benthica KT99]
          Length = 378

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 102/263 (38%), Gaps = 12/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +  ++ +  +Y      +  S+  +   +++A+ +      +   
Sbjct: 122 AITEPSAGSDVGSLLTTYKRKNGKVYITGSKCFITSAAGTPYIVVMAK-DADSEKPIFTE 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IY 317
              D S  G+   +L  K+G + ++  EL+F                    +K       
Sbjct: 181 WFVDMSKPGIKLNKLP-KLGLKMDSCCELQFDELELEESDMFGKEGNGFLRVKQEFDSER 239

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +  A
Sbjct: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVYEAA 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D     S ++A         K++C      VI  AM+ +GG   + E  I+R +R+ 
Sbjct: 300 WKCDNGMMTSGDSAM-------CKFYCANAGFEVIDSAMQVLGGYAIVGEHRISRMWRDI 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  GS    +L +   + K
Sbjct: 353 RVDRVSGGSDEMQILTLGRSVLK 375


>gi|260553901|ref|ZP_05826168.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260404933|gb|EEW98436.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 401

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|284046517|ref|YP_003396857.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950738|gb|ADB53482.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 385

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 113/347 (32%), Gaps = 32/347 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +R     G   ++    +       +           +   A       +     V  
Sbjct: 39  EFVRALTEHGWLAALIPEQYGGAGLPLSAASVILEEICASGCNA-GACHAQMYVMGTVLR 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +      W P+I +                    G+TE   G+D   I ++ ++  DG
Sbjct: 98  HGSDEQKARWLPEIAAGRLR------------LQAFGVTEPGAGSDTTKIQTRARRDGDG 145

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNG--LCYQRLKNK 278
                   W   +  SD  ++LA+             +   L D    G  L  + +K  
Sbjct: 146 WVVDGQKIWTSRAEHSDLMVLLARTTPIDQIEKKTDGLSVFLVDMRERGDELTIRPIKTM 205

Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           + N +  T E+           L+G+ +     + D      +  A   +   R    +A
Sbjct: 206 M-NHA--TTEVFLDGLRLPADALVGEQDRGFRYILDGMNAERILIAGECIGDGRFLTEKA 262

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA  R V G  +     ++  IA   + + AA  + ++    +++ K    EA  A+ 
Sbjct: 263 VGYASERTVFGRPIGANQGVQFPIARAHMALEAANLMRWKAVWLYEQGKPCGAEANMAKF 322

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +A    +            +++  GG G+ EE  + R +RE+   S+
Sbjct: 323 LASEASWAA-------ANASVDAHGGFGFAEEYDVERKFRETRLYSV 362


>gi|300857086|ref|YP_003782070.1| putative acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM 13528]
 gi|300437201|gb|ADK16968.1| predicted acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM
           13528]
          Length = 390

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 117/330 (35%), Gaps = 22/330 (6%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           E        +      A+    R+  D+  K    EY        Q  ++     LTE+ 
Sbjct: 74  EEFSRGPGGMRMHLHYAMDLNWRILDDFGSKELKDEYMDKF----QDKTIFTCFALTEET 129

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGC-FLVPRLLED 264
           GGT  A + ++  K  D  Y ++G K  +S      F  ++A  +        +      
Sbjct: 130 GGTG-ADLHTRAVKDGD-YYIMNGEKTLISHTDCCEFAYVIAVTDPDAPKDKRLSAFFVP 187

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
            +  G     + + +G R      L+F+N      +LLG              +     A
Sbjct: 188 VNTPGYEIVPMPHMMGCRGAGHAGLKFTNMKLDKKYLLGKEGEGLKIAMHSLSVSRAHIA 247

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
           + ++   +  L   I  A+ R   G  L+ +  +++ IAD+  +I A   + +  A  ++
Sbjct: 248 VSNLGMSQRMLEMTIKRAKDRVTFGKPLVKRQAIQQTIADMGTEIHALRLMVYDFAKDYE 307

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE---RSIARHYRESP 438
             K    +AA  ++ +  T               +E  GG GY EE     + R YR+  
Sbjct: 308 AGKEIEMKAAMCKLHSINTVKLVSDY-------MLEIFGGIGYFEECEYGPVERLYRDCR 360

Query: 439 ANSILLGSGNAMVLDVLN-LLEKGTNLFEQ 467
           A  +  G      L     L+  G N  E+
Sbjct: 361 AMWLEEGPRTVQRLTASRKLIANGGNTEEE 390


>gi|325524529|gb|EGD02568.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 395

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 119/376 (31%), Gaps = 39/376 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-----AARLYLMAQLEAG 149
           + V        + RRS   G + +             A         AA    +A    G
Sbjct: 37  EDVWPRDVLRRVWRRSAALGFYTASLPVEIGGQGLSIAEVCALKADLAASGAALAPHILG 96

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L  P      +     TP   + +               P+ +   +    LTE   G+
Sbjct: 97  ELGGPPRIGNML--KYATPAQLERYFK-------------PVMRGEKSTCFALTEPHSGS 141

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  +I +   +  D +       +   +P +D  I++   +       +  +L D    G
Sbjct: 142 DAMSIRTTAVEDGDSLVINGTKHYISGAPFADFAIVMCVTDVTATPPQITAVLVDLDLPG 201

Query: 270 LCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
           +  +     + G       ++ F +         NV  G     K+ +       L    
Sbjct: 202 VTVEHEYVPMSGQH--IDADIRFVDVRV---TRENVFGGIGNGFKLGMSRISVNRLLHCP 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +     +   A+ YAR R   GG +     ++  +AD+A ++ A  ++          
Sbjct: 257 TMLGLAMSAYRAALDYARTRRQFGGPIARFQAIQHMLADMATELWACESMIAHT------ 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + ++  A  R+M+   K +  +    V  +A++  G  G      + + +R+     I
Sbjct: 311 -AALADAGADLRMMSSACKLYVSERCFEVADKAVQIHGNVGVTRGHPVEQTFRKLRMFRI 369

Query: 443 LLGSGNAMVLDVLNLL 458
           L G+       +   +
Sbjct: 370 LTGTSEIQRNAIAKAI 385


>gi|193077279|gb|ABO12069.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 401

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|184157987|ref|YP_001846326.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|332874446|ref|ZP_08442349.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
 gi|183209581|gb|ACC56979.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
 gi|323517931|gb|ADX92312.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737290|gb|EGJ68214.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059]
          Length = 401

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|90419471|ref|ZP_01227381.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336408|gb|EAS50149.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
          Length = 385

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 123/361 (34%), Gaps = 36/361 (9%)

Query: 94  WDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W +++   A+    ++     G   ++    F       +         +  Q       
Sbjct: 26  WRELDERRAYPTEFVKALTEAGFLSALIPEEFGGSGLPLS-AAAVILEEIHRQGGNAGAC 84

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              + +   +    +    + + P+I               T      G+TE   GTD  
Sbjct: 85  HAQMYTMGTLLRHGSDAQKQAYLPQIAEG------------TLRLQSFGVTEPTSGTDTG 132

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
           ++ +  ++  D +Y ++G K ++S S  SD  I+L +             +   L D   
Sbjct: 133 SLRTTARREGD-VYRINGQKIWISRSEHSDLMILLCRTTPLDQVEKKTQGLSVFLVDMPE 191

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL  + ++  + N +  T EL F +       ++G+       +        +  A
Sbjct: 192 AKANGLTIRPIRTMM-NHA--TTELFFDDVPVPAANMIGEEGKGFRYILSGMNAERILIA 248

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +  + +A  YA  R V G  +     ++  IA     + AA  +       ++
Sbjct: 249 AECIGDAKWFIDKAAAYAGERVVFGRPIGQNQGIQFPIAKAYARMRAAELMLHEAIRLYE 308

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++   EA  A+++A                  ++  GG G+ EE  + R +RE+    
Sbjct: 309 ANENPGAEANMAKMLAAEAS-------WEAAEACVQTHGGFGFAEEYDVERKFRETRLYQ 361

Query: 442 I 442
           +
Sbjct: 362 V 362


>gi|169796086|ref|YP_001713879.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213157181|ref|YP_002319226.1| acyl-CoA dehydrogenase, middle domain protein [Acinetobacter
           baumannii AB0057]
 gi|215483541|ref|YP_002325760.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
 gi|301345295|ref|ZP_07226036.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301594634|ref|ZP_07239642.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
 gi|169149013|emb|CAM86890.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE]
 gi|213056341|gb|ACJ41243.1| acyl-CoA dehydrogenase, middle domain protein [Acinetobacter
           baumannii AB0057]
 gi|213986265|gb|ACJ56564.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294]
          Length = 401

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|256422428|ref|YP_003123081.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
 gi|256037336|gb|ACU60880.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM
           2588]
          Length = 385

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/369 (20%), Positives = 139/369 (37%), Gaps = 35/369 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  E++D  +  P   ALL++   +GL  +     F      Q            A   A
Sbjct: 27  PIAEQYDSEQVFPD--ALLKKMAAEGLLGATIPTEFGGRGWDQVIAGLMHEEIGRACSSA 84

Query: 149 GHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
             L++  ++  +  V    T +    W P + +                     LTE   
Sbjct: 85  RSLLTVHLSLVSETVLRWGTYQQKAQWLPLLATG-------------QKIAAFCLTEPEA 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D  ++ +  +K  DG   L+G K + +   ++D +++ A+   +     +   L D  
Sbjct: 132 GSDAKSVAATYEKR-DGKIILNGKKRWTTFGQLADVYLVFARNADK-----ISAFLVDRH 185

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G+    ++  +G R++    + FSN        L    G      +   LD+   SV+
Sbjct: 186 TAGVEVTPVQGMLGTRASMIAHVTFSNCEIPEDALLGKE-GFGFISIVNTALDNGRFSVA 244

Query: 327 GMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      L  ++ +A RR   G  L D  ++K  + D+  +  AA  L +  A    
Sbjct: 245 LGSLGILKSCLQHSMEHASRRRQFGTFLKDHQLIKLKVTDMIAEAKAAGMLCYNAAYL-- 302

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
               R E+   A I   + KY+    A     EA++ +G  G  E+ ++ R +R++    
Sbjct: 303 ----RKEKQTNALIQTSLAKYYAAAAANRAAKEAVQILGALGCSEQSAVQRCFRDAKIME 358

Query: 442 ILLGSGNAM 450
           I+ GS    
Sbjct: 359 IIEGSAEMQ 367


>gi|320007286|gb|ADW02136.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 387

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 13/283 (4%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  E               + + ++E   G+D+AA+    ++  DG + ++GHK ++S+ 
Sbjct: 109 FGNEAQCKAAVGGAVAGQVLSIAMSEPEAGSDVAALRCAAERTPDGGWLVNGHKTWISNA 168

Query: 239 M-SDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
             ++  +++A+ +        +          G+  + ++  +G R     ++ F+    
Sbjct: 169 HLAEHILLVARTDASGTKREGLTMFHVPAGTPGIRIRPIET-MGGREVN--DVYFTEVRL 225

Query: 297 FLLGDLNVSTG---PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
                + V+      +        L  A   +      L + + Y R R   G  +    
Sbjct: 226 PADAVVGVADHAWPQLMAGLDAERLFLAANMLGLAERVLEDTVAYVRGREQFGRPVGSFQ 285

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +AD+A +I  A  L F +A + D     +E        A + K    + A     
Sbjct: 286 ALRHRLADLATEIECARLLVFDVAAACD-----AEPGRRFSREASMAKLKATETARNAAL 340

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           E M+ +GG GY  E  + RH R +  +++  G+       +  
Sbjct: 341 EGMQMMGGYGYATEYDMERHLRAAVVSTVYGGTSEIQRDIIGR 383


>gi|298242553|ref|ZP_06966360.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297555607|gb|EFH89471.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 393

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 135/408 (33%), Gaps = 32/408 (7%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWHALLRRSIHDGLHCSI 119
           + ++ LS   QE    A  +   L    P     D+ E    ++   +++    G+    
Sbjct: 1   MLDFRLSAKQQEYREFA--HQIALEEMRPISLECDRTEQIPESFFWQMQKRFRGGVEGQT 58

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
                    ++    + A              M     +A  +    +P   + +     
Sbjct: 59  RQFRQPGERQEALLAMLAHEEMAWGDAALATAMPGPGLAAPPILAQGSPEQQEKFL---- 114

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
                               L LTE   G+D+A + +  +   +         +  +   
Sbjct: 115 --------CIYRDDQLHWGALALTEPGIGSDVAGMATTARLEGEEWVIDGHKHYITNGAR 166

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  I  A ++  +G   +   +      GL   R++ K+G R++ T EL F N      
Sbjct: 167 ADLIITFATIDKSMGRAGIRPFVVPKGTPGLVIGRIEEKMGLRASQTTELIFENCRIPKD 226

Query: 300 GDL-NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRR-HVSGGILIDQPVMK 356
             L     G     K  +  LD+    V  + V +  A +   +  +         P  +
Sbjct: 227 HLLAGREAGAKGGFKAAMGTLDATRPMVGALAVGICRAAYEGAQAWYQHELPAGYAPYQR 286

Query: 357 RAIA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
           R IA    ++  +I  A  L +R A   D+    S+EA+         K +  ++   V 
Sbjct: 287 REIAEKLEELRQEIQMARLLVWRAAWMADQRIPNSKEASM-------CKAYAGQLVMKVT 339

Query: 413 AEAMECIGGSGYIEERS--IARHYRESPANSILLGSGNAMVLDVLNLL 458
           AEA+  +   G + E    I + +R++    I  G+     L +   +
Sbjct: 340 AEAVR-LSSPGEMTETKQFIHKWFRDAKVFDIFEGTAQIQRLVIARRM 386


>gi|313902473|ref|ZP_07835875.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467271|gb|EFR62783.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 397

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 121/369 (32%), Gaps = 33/369 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSAS 160
             A+ +     GL      R    +            +   + L   A    +P   +  
Sbjct: 45  MKAIQQAVKEAGLWAPHMPREAGGLGMGMVTLALMNEILGRSPLAPRAFGTSAPDTGNQE 104

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQ 219
           ++ +  TP   + +               P     +     +TE    G+D   I ++  
Sbjct: 105 ILWMFGTPEQKERFL-------------RPNLAGEIYSCFAMTEPEVSGSDPTTIRTRAV 151

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKN 277
           +  D  + ++GHKWF+++   S   I++A  + G         ++      G    R   
Sbjct: 152 RDGDH-WVINGHKWFITNASRSAFAIVMAVTDPGAPPHQRATMIIVPTDTPGFRIVRQIP 210

Query: 278 KI---GNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            +   G       E+   +    +   LG +       +       +  A+  +  M  S
Sbjct: 211 VMDDGGGLGTHD-EIVLEDCRVPVANTLGPVGEGFRIAQARLGPGRITHAMRWIGVMNRS 269

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
               +  A  R   G  L +   ++  +AD   +I AA  L+   A   D+     +E  
Sbjct: 270 FELMVRRALTRETRGQKLAEFQTIQNFVADSYAEIQAARLLTLYAAWRVDQGLDARKE-- 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K++  ++   V+  A++  G  GY  +  +   YRE+ A  I  G      
Sbjct: 328 -----ISLIKFFGAQVLHRVVDRALQVHGALGYSRDTPLELFYREARAARIYDGPDEVHR 382

Query: 452 LDVLNLLEK 460
           + V   + K
Sbjct: 383 VVVARRIFK 391


>gi|21224321|ref|NP_630100.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|256784593|ref|ZP_05523024.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289768477|ref|ZP_06527855.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|15020703|emb|CAC44598.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|289698676|gb|EFD66105.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 391

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 102/328 (31%), Gaps = 31/328 (9%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A  EA   ++     A  V    T      W P++                +      
Sbjct: 70  AHACTEAETALALQGLGAHPVHAHGTESQRARWLPRV-------------SDGTAVAAFA 116

Query: 202 LTEKRGGTDIAAITSQGQKISD------GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
           L+E   G+D AA++ + +  +                W  ++P +D + + A+     G 
Sbjct: 117 LSEPDAGSDAAALSLRAEPEAGPGAGASAWRLTGEKCWISNAPEADFYTVFARTTPGAGA 176

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312
             V   L      GL    L + +         L F         +LG+ +       D 
Sbjct: 177 RGVTAFLVPADRPGLTGTPL-DMLSPH--PIGALTFDGVPVDADDVLGEPDRGFRVAMDT 233

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
             L        +V   + +L   + +   R   GG L D   +   +A++AL   AA  +
Sbjct: 234 LNLFRPSVGAFAVGMAQAALDATLAHTTAREAFGGRLRDLQTVAHQVAEMALRTEAARLM 293

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            +  A ++D               A + K    + A  V+  A++  G         +  
Sbjct: 294 VYAAATAYDAGDPD------VPRRAAMAKLLATETAQYVVDHAVQLHGARALRRGHLLEH 347

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            YRE  A  +  G+       V   L +
Sbjct: 348 LYREVRAPRVYEGASEVQRGIVAKELYR 375


>gi|322697403|gb|EFY89183.1| hypothetical protein MAC_04770 [Metarhizium acridum CQMa 102]
          Length = 439

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 127/363 (34%), Gaps = 25/363 (6%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
             ER  K +    +HA + +    G+           +   +A  +        A +   
Sbjct: 69  WQERDQKEQDPKEFHAAIAKGGWLGI-ALPESLGGSGLGMSEATMMMQTIAESGAGMAGA 127

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +V +   +A   T     +  P I S ++                 G+TE   G 
Sbjct: 128 QAIHANVYATQPLAKFGTQEQVNEAIPNIISGKWR-------------TCFGVTEPNAGL 174

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLED- 264
           +   +++  Q+ +DG        W   + ++   I+LA+   R         +     D 
Sbjct: 175 NTLGLSTTAQRTADGYSITGQKIWITCAQVASKMILLARTTPRDRAEKPSEGLSLFCIDL 234

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
             +  GL  +R+K K+G R+    E+ F N       ++G+       +           
Sbjct: 235 DRARPGLELRRIK-KMGGRAVDANEVFFDNYQIPASAMIGEQGRGFKMILHGMNAERCLL 293

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++     +L++A  YAR R V    +     +   +AD  + + AA   ++  A  +
Sbjct: 294 AGEALGLGYAALSKAASYARERVVFERPIGMNQGVAHPLADAYVKLEAAKLATYHAARLY 353

Query: 381 DEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           D++   +     A  +A    KY   + A      A+   GG GY  E  + R +RE   
Sbjct: 354 DQSTHDANIKQDAVGVAANSAKYVAAEAAFTACERAVLAHGGMGYAAEYDVERWFRECLV 413

Query: 440 NSI 442
             I
Sbjct: 414 PRI 416


>gi|322704457|gb|EFY96052.1| hypothetical protein MAA_08544 [Metarhizium anisopliae ARSEF 23]
          Length = 427

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 129/411 (31%), Gaps = 30/411 (7%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKV-EFHPAWHAL 106
              P     +L+ L     S  A+    + +++     +     E   K+ + +P  + L
Sbjct: 8   RLLPRRARPQLQRLASRPYSAAARATEFLQSHSPDLSESQKAVREAIGKICQKYPDEYWL 67

Query: 107 LRRS-------IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            R          +  L    W     P  +     +  A    M Q  A         SA
Sbjct: 68  AREQSKEFPADFYHDLAKGGWLGICLPE-KYGGSGLGLAEASTMMQTIAESGGGMQAASA 126

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             + +     V      K  + +       P+          +TE   G D   + S+  
Sbjct: 127 VHINIFGLEPVA-----KFGTEQQKKRFLEPLIAGRERACFAVTEPNTGLDTLKLQSKAV 181

Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED-GSPNGLCYQR 274
           +  D         W  ++  +   ++LA+       +     +     D      +    
Sbjct: 182 RNGDHYVLSGQKIWITTAQTAQKILILARTTPISQVKKSSEGLSLFYTDLNDSLPIQITE 241

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           + +K+G  +  +  + F          +GD       +        +     ++     +
Sbjct: 242 I-DKMGRGAIDSNSVFFDGWKVPCKDRIGDEGHGFKLIMHGMNAERILIGCEALGLGYAA 300

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A  Y+  R V G  +     ++  +AD  +++ AA  +  + A  +D+     E A 
Sbjct: 301 LRRAALYSNERVVFGRPIGQNQAIQHPLADSWMNLEAARLVLAQAARMYDDGYQGGEYAN 360

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + +A    +  C+ A       + C GG GY +E  + R+ RE     I
Sbjct: 361 AGKYLAAEAAFKACERA-------VMCHGGMGYAKEYHVERYLREVLIPRI 404


>gi|110834563|ref|YP_693422.1| acyl-CoA dehydrogenase middle domain-containing protein
           [Alcanivorax borkumensis SK2]
 gi|110647674|emb|CAL17150.1| Acyl-CoA dehydrogenase, middle domain [Alcanivorax borkumensis SK2]
          Length = 401

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 20/276 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +  ++  D  Y L+G K F++S   +D  ++ A ++ +
Sbjct: 126 KGKWAAMAITEPGCGSDSAAIRTTAKQDGDH-YILNGEKIFVTSGERADCVVVWASLDPK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
           +G   +   + D    G+   RL+ K+G R++ T  + F +        L    + T   
Sbjct: 185 LGRAAIKSFVVDWGTPGMELARLEKKLGIRASDTAAINFVDCRVPAENLLGTPEIDTKKG 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR------RHVSGGILIDQPVMKRAIADI 362
               ++   D+    V+ M +  A+A +   +        +     + +   ++  I  +
Sbjct: 245 FAG-VMETFDNTRPLVAAMAIGCAKASLERIKELLKDSINYDYSKPVDNCSAVEAEIYKM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ + A   D  K+ + E       A I+K    ++  A+    +E  G  
Sbjct: 304 EADWEAAYWLAVKAAWMADNKKANTLE-------ASISKAKAGRVGNAITLRCVELAGSL 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+     L +   +
Sbjct: 357 GYTEDELLEKWARDSKILDIFEGTQQIQQLVIARRI 392


>gi|332851737|ref|ZP_08433662.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332865888|ref|ZP_08436668.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
 gi|332729744|gb|EGJ61079.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150]
 gi|332734938|gb|EGJ66024.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113]
          Length = 401

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDSNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRIGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|134081279|emb|CAK41785.1| unnamed protein product [Aspergillus niger]
          Length = 415

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 136/382 (35%), Gaps = 25/382 (6%)

Query: 99  FHPAWHALLRRSIHDGL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           + P      +        H       +E   +   H++  A +  +   +  ++ +    
Sbjct: 25  YSPGHRRFQKACREFFWEHLHSHAAEYEKAGQVPEHRLGIADILGVKVEDWDYMYTGIYF 84

Query: 158 SASMVALMTTP-----RVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
                + M  P            P +    SRE        +        + +TE   G+
Sbjct: 85  DEMARSGMAGPGSSLNAGFNFAIPPVLKYGSRELQERFLPDLLTGRKRCCIAITEPEAGS 144

Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
           D+A IT+   K  DG  Y ++G K ++++ +   F  +A   G  G   +  LL      
Sbjct: 145 DVANITTTATKTPDGKYYLVNGAKKWITNGIWSDFATMAVRTGGPGASGLSLLLVPLKGH 204

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  + LK   G  ++ T  +E  +       L+G        +        L  A+  
Sbjct: 205 PGVTMRPLKVT-GPITSGTTYIELDDVKVPVENLVGREGDGMRMIMTNFNHERLSIAVGV 263

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA----LSFRLANSF 380
               RV+L+ A  Y  +R   G  L+DQPV++  +A    ++    A    L ++L +  
Sbjct: 264 TRQARVALSTAFQYCLKREAFGKTLMDQPVVRNRLARAGAELETLGAFVEQLLYQLCHLS 323

Query: 381 DEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            E   R      A A+  A +    C + A  +   A    GG G +    +    RE P
Sbjct: 324 KEEGDRRLGGITALAKAKAGMVLNECAQCAILLFGGAGLTQGGQGEL----VESILREVP 379

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
           A  I  GS + ++   +  L K
Sbjct: 380 AARIPGGSEDVLLDLAVRQLVK 401


>gi|72161686|ref|YP_289343.1| acyl-CoA dehydrogenase [Thermobifida fusca YX]
 gi|71915418|gb|AAZ55320.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX]
          Length = 392

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 77/413 (18%), Positives = 147/413 (35%), Gaps = 49/413 (11%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
              H+E++ +    ++   +E A  A+                  VE H     +LR S 
Sbjct: 22  GPRHREIQRI-ARSVAERVEEYADEADAA----------------VEVHQGVAEILRESG 64

Query: 112 HDG-LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
               +  + +    + +       IR A +Y  A L++   M      +  +A+  T  +
Sbjct: 65  LARHVVPAAYGGESDVLDPLAIAVIREALMYTSAHLDSLFGMQG--VGSYSLAVGGTEEL 122

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            ++W PK+              +     GL LTE   G+D+  +T+  +    G+     
Sbjct: 123 KREWLPKV-------------ARLEAIAGLALTEPDIGSDLRGVTTTIEATPTGVRVSGR 169

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             +  +   +D + +L +        LVP         GL  +R  + I        EL 
Sbjct: 170 KSFITNGGAADFYCVLGREGEGYSMVLVPA-----DTPGLTVERGDDLIAPH--ILGELH 222

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F          L V       M   +    +  A  +V   + +L EA+ +A+ R   G 
Sbjct: 223 FDGAEVPENHRLGVPGKAFSLMLQTLAVFRVTVAGSAVGLAQAALDEALRHAKTRTQFGR 282

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            L++   + +++A    ++  A A+++R A           + +       I K    + 
Sbjct: 283 PLLELGAVSQSLALSWTEVETARAITYRAAALAKNDPLAHLDYS------SIAKVSATEA 336

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           A  V+  A++ +G  G I    I R YR +    I  G+   ++  +   L K
Sbjct: 337 AGRVVDRAVQAMGRFGLIRGSKIERLYRNARPLRIYEGATEVLLDSLARRLAK 389


>gi|169633496|ref|YP_001707232.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF]
 gi|169152288|emb|CAP01198.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii]
          Length = 401

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDSNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYKEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|258568884|ref|XP_002585186.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237906632|gb|EEP81033.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 440

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 75/452 (16%), Positives = 151/452 (33%), Gaps = 40/452 (8%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMAN 78
            A N          +S    L  L + + S  H++ +          ++  A E  R + 
Sbjct: 1   MATNSVNPV----PFSEPPYLCGLPSPYYSEAHRDFQKRCRAFLWENMNKYAMEWERESQ 56

Query: 79  YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIR 136
                   +G        +        L R  IHD  G+    WD  +  +   +  +  
Sbjct: 57  VPEHVFETFGKYNMLLPNLPSPLPVGWLKRLGIHDILGVKVEDWDIMYTMIYLDEMGRSG 116

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
                          + P       V    +  + + + P   +                
Sbjct: 117 LHGPPSSLTAGFAFGIPP-------VIKFGSKELQERFLPDFLT-------------AKK 156

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255
            + + +TE   G+D+A IT+   K +DG  Y ++G K ++++ +   +  +A   G  G 
Sbjct: 157 RMCIAITEPDAGSDVANITTTAVKSADGKHYIINGTKKWITNGIWSDYTTMAVRTGGPGA 216

Query: 256 FLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVED 311
             +  +L    +  G+  +R     G  ++ T  +E  +       L+G+       +  
Sbjct: 217 SGLSIVLVPLKNYPGVSMRRFYVS-GQTASGTTYIELDDVKVPVENLIGEEGQGMKYIMT 275

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L  ++      RV+L+ A  Y  +R   G  L+DQPV++  +A    ++ +  A
Sbjct: 276 NFNHERLTISVGVTRQARVALSAAFEYCLKREAFGKTLMDQPVVRHRLAKAGAELESMWA 335

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ER 428
              +      +  S+ E       +  + K     +       A+   GG+G        
Sbjct: 336 WVEQFFYQV-KHMSKEEGDRRLGGLTALAKAKAGMVLNECAQVAVLLFGGNGLTRTGQGE 394

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +  RE     I  GS + ++   +  L K
Sbjct: 395 LVEKISREVWGARIPGGSEDVLLDLSIRQLVK 426


>gi|157963848|ref|YP_001503882.1| crotonobetainyl-CoA dehydrogenase [Shewanella pealeana ATCC 700345]
 gi|157848848|gb|ABV89347.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 378

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 12/263 (4%)

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
            +TE   G+D+ ++ +  ++  DG   L+G K F++S     +I++   +      +   
Sbjct: 122 AITEPSAGSDVGSLLTTYKRR-DGKVYLTGSKCFITSAAGAPYIVVMAKDADSEKPIFTE 180

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IY 317
              D S  G+   +L  K+G + ++  EL+F            +       +K       
Sbjct: 181 WFVDMSKPGIKMSKLP-KLGLKMDSCCELQFDEFELEESDMFGIEGNGFMRVKEEFDSER 239

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A+ +      +  +A  YA +R   G  +    +++   A +A+ + +   + +  A
Sbjct: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGEAIGRYQLIQEKFAHMAIKLNSMKNMVYEAA 299

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D     S ++A         K++C      VI  AM+ +GG     E  I+R +R+ 
Sbjct: 300 WKCDNGTMTSGDSAM-------CKFYCANAGFEVIDSAMQVLGGYAIAGEHRISRMWRDI 352

Query: 438 PANSILLGSGNAMVLDVLNLLEK 460
             + +  GS    +L +   + K
Sbjct: 353 RVDRVSGGSDEMQILTLGREVLK 375


>gi|296816493|ref|XP_002848583.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
 gi|238839036|gb|EEQ28698.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480]
          Length = 446

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 158/461 (34%), Gaps = 53/461 (11%)

Query: 23  FALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL-----LGEYVLSCTAQELARMA 77
            A N P        +S    L  L + + +  H+  +      + E++ S  A E  R  
Sbjct: 1   MATNSPNPI----PFSEPPYLCGLPSPYYTDAHRRFQKACRAFIWEHLHSH-AMEWEREG 55

Query: 78  NYNTPQLHAYGPGGERWDKVEFHP---AWHALLRRSIHD--GLHCSIWDRSFEPVVRKQA 132
                    +G        +   P   AW  L   +IHD  G+    WD  +  +   + 
Sbjct: 56  TVPPHIFEIFGKHNMLIPNLP-SPLPVAW--LKELNIHDILGVKVEDWDLIYTGIYLDEM 112

Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
            +   +             + P +          +P + + + P + +            
Sbjct: 113 SRCGLSGPPGSLTAGFAFGIPPMLA-------FGSPALQEKFLPDMLT------------ 153

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEG 251
            + V   + +TE   G+D+A IT+  +K +DG  Y ++G K ++++ +   +  +A   G
Sbjct: 154 -SKVRSCIAITEPDAGSDVANITTTAEKSADGKHYIINGEKKWITNGIWSDYTTMAVRTG 212

Query: 252 RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
             G   +  ++       G+  +RL    G     T  +E  N       L+G       
Sbjct: 213 GPGPTGLSLIVVPLKGHPGVTMRRLPVS-GQVCGGTTYIELDNVKVPVENLIGQEGHGMK 271

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +        L  A+      RV+L+ A  Y  +R   G  L+DQPV++  ++    ++ 
Sbjct: 272 YIMTNFNHERLTIAVGVTRQARVALSSAFEYCMKREAFGKTLMDQPVVRHRLSKAGAELE 331

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE- 426
           +  A   +     +    +         +  + K     +       A+   GG G+ + 
Sbjct: 332 SMWAWVEQFLYQMNN-MPKEVGDKRLGGLTALAKAKAGIVLNECAQVAVLLFGGLGFTKS 390

Query: 427 --ERSIARHY-----RESPANSILLGSGNAMVLDVLNLLEK 460
                + R       R+ P   I  GS + ++   +  L K
Sbjct: 391 GQGELVERLMNLEILRDVPGARIPGGSEDVLLDLAVRQLVK 431


>gi|262203342|ref|YP_003274550.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086689|gb|ACY22657.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 407

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 105/283 (37%), Gaps = 21/283 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+T+      D  Y ++G K F+++       ++ A V+  
Sbjct: 131 GKVWAAMAITEPSFGSDSAAVTTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATVDKN 189

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
           +G   +   +      G+   RL++K+G R + T  + F N        L    V T   
Sbjct: 190 LGRAAIKSFVVPREHPGVEVVRLEHKLGIRVSDTAVIRFENCRIPKENLLGSPEVDTKKG 249

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--------SGGILIDQPVMKRAIAD 361
               ++   D+    V+GM V +A A     RR +              DQ         
Sbjct: 250 FGG-VMQTFDNTRPLVAGMAVGVARAALEELRRILEEAGIEIDYDRPAADQHAAAAEFIR 308

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  AA  L+ R     D  +  S EA+ A+  A        +    V  + +E  G 
Sbjct: 309 MESDFEAAYLLTMRACWMADNKQPNSLEASMAKAKAG-------RTGTDVTNKTVELTGT 361

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
            GY E   + +  R+S    I  G+     L +   +   ++ 
Sbjct: 362 LGYSERLLVEKWARDSKILDIFEGTQQIQQLIIARRVLNKSSA 404


>gi|86751043|ref|YP_487539.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86574071|gb|ABD08628.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 391

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 120/341 (35%), Gaps = 34/341 (9%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G    +    +     K +           A    G      + +   +    +     
Sbjct: 51  AGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCN-GGGCHAQMYTMGTLLRHGSDEQKA 109

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            W PK+ S E                  G+TE   GTD  ++ +  +K  +G Y ++G K
Sbjct: 110 KWLPKVASGELR------------LQAFGVTEPTSGTDTTSLKTFAKKDDNGDYVVNGQK 157

Query: 233 WFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSN 284
            + S +  SD  I+LA+   +         +   L D      +GL  + ++  + N + 
Sbjct: 158 IWTSRAEYSDLMILLARTTPKDQAAKKTEGLSVFLVDMREARGHGLEIRPIRTMM-NHA- 215

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
            T E+ F++       L+G+       +        +  A   V   +  +A+A +YA+ 
Sbjct: 216 -TTEVFFTDLKVPKENLIGEEGKGFRYILSGMNAERILIAAECVGDAKWFIAKASNYAKD 274

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R V G  +     ++  IA    ++ AA  +       ++       EA  A+++A    
Sbjct: 275 RTVFGRPIGQNQGIQFPIAKAYANMRAAELMVKEATRKYEAGMDCGAEANMAKMLAA--- 331

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 +       ++  GG G+ EE  + R +RE+    +
Sbjct: 332 ----DASFEAANACIQTHGGFGFAEEYDVERKFRETRLYQV 368


>gi|224087764|ref|XP_002308225.1| predicted protein [Populus trichocarpa]
 gi|222854201|gb|EEE91748.1| predicted protein [Populus trichocarpa]
          Length = 436

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 117/367 (31%), Gaps = 29/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K +F   +HA+ +     G+          P +   A  I  A +           + 
Sbjct: 80  WEKAKFP--FHAIPKLGA-LGIAGGTIKGYGCPGLSITASAIAMAEV-ARVDASCSTFIL 135

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
               +   +A   +      + P +              + S      LTE   G+D + 
Sbjct: 136 VHSLAMLTIAFCGSEEQKLKYLPSL-------------AQFSTVACWALTEPDYGSDASG 182

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  +S  +D  ++ A+         +   +      GL   
Sbjct: 183 LKTTAIKVEGGWILEGKKRWIGNSTFADLLVVFAR---NTTTNQINGFIVKKDAPGLTVT 239

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++     F      L       +  K+L    +  A   +      
Sbjct: 240 KIENKIGLRIVQNGDIVMKRVFVPDEDRLPGVNSFQDTNKVLAVSRIMVAWQPIGISMGV 299

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ +  +  ++ A   + +RL   +++ K       
Sbjct: 300 YDMCHRYLKERKQFGAPLAAFQINQQKLVHMLGNVQAMVLVGWRLCKLYEKEK------- 352

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A    +   E +GG+G + +  +A+   +        G+ +   
Sbjct: 353 MTPGQASLAKAWISLKARETASIGRELLGGNGILADFLVAKALCDLEPIYTYEGTYDINS 412

Query: 452 LDVLNLL 458
           L     +
Sbjct: 413 LITGREI 419


>gi|302549721|ref|ZP_07302063.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467339|gb|EFL30432.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 379

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 127/401 (31%), Gaps = 33/401 (8%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            + +   +  A +   +  +L  + P G+         A     R +   G+        
Sbjct: 4   DLSAAQKKRYAEILRESGTRLGEHRPDGD-------PDAVRRGFRTAAGIGVTGLCLPEE 56

Query: 124 FEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
           F          A  + A          A  + +  +  A  V    T  V       + S
Sbjct: 57  FGGGGLGALDTALGLEAFGRGCPDTGLAFGVAAHLLACAVPVRDFATDDVRGPLLKGLAS 116

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E             +     +TE   G+DI  +    + +SDG        W  ++P++
Sbjct: 117 GE-------------LIAANAMTEDEAGSDIGRLGVTARPVSDGYLLNGEKSWASNAPVA 163

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
              +  A     +G   +      G   G+ +     K+G  +     + F++      +
Sbjct: 164 GLVVTYACTAPELGFLGLSAFAVPGDLPGVSFGPPLRKMGLTNCLAGRVTFTDCHVPRRY 223

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           LLG     +G  +            + +  M   LA+ + +A RR   G  + +   +  
Sbjct: 224 LLGAEGQGSGIFQHSMAWERAALFGVYLGLMERQLAQCVEHAGRRRQFGRRIGEFQAVSH 283

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +   + +   L +R     DE +      A A+           + A A   +AM+
Sbjct: 284 RMAVMKQRLESGRLLLYRACWLLDEGREDKSAIALAKAT-------VSEAAVANGLDAMQ 336

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG GY+ +  +    R+S    +  G+       V   L
Sbjct: 337 LFGGLGYLADSGVEEQLRDSLPARVFSGTTEIQREIVAKEL 377


>gi|12698384|gb|AAK01498.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa]
          Length = 390

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+  ++GP    R D          L+ R+   GL      R    +    +H  +A
Sbjct: 28  ENDPRQDSHGPSDALRQD----------LVARARAAGLLTPHASREMGGLAL--SHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTATRDGDD-YLINGRKWLITGAEGADFGIIMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   +  + R +R+     I  G      + +   L
Sbjct: 347 GVTGDTVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|284045849|ref|YP_003396189.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283950070|gb|ADB52814.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 394

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 95/282 (33%), Gaps = 13/282 (4%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E       P+          +TE   G+D+AA+  +  +            W  ++P 
Sbjct: 118 SEEQVDEWYEPVVSGDAVAAFAMTEPDAGSDVAALALEAHRDGGDYLLSGTKVWISNAPD 177

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D +++ A+             +  G   GL  + L+      S+    L F N      
Sbjct: 178 ADVYVVFARTGNGNARTSQTAFIVPGDAPGLTGEPLEL---IVSHPVGRLVFDNVRVPSS 234

Query: 300 GDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
             +  V  G    MK L    +      ++  + +L   I + +RR   G  L  +  + 
Sbjct: 235 AVVGEVGQGWEIGMKTLEQFRISVGAFGLAVSQAALDATISFLKRREQFGAPLSTRQALA 294

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++   + AA  L +  A  FD  +     +A A       K    + A  V+   +
Sbjct: 295 HRVAELTSQLTAARLLIYHTAERFDAGEPDGRLSAMA-------KLRATETAQEVVDACV 347

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  G     +   +   YRE  A  I  G+   +       L
Sbjct: 348 QMHGACALEQGHLLGHLYREVRAPRIYEGASEVLREIAARSL 389


>gi|326329900|ref|ZP_08196215.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952291|gb|EGD44316.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 404

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 125/369 (33%), Gaps = 43/369 (11%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-----YLMAQLEAGHLMSPSVTSAS 160
           L      +G   +   R  +P   K  +    + +          +     M       S
Sbjct: 54  LAESGQGEGAGATGVRRDSKPDDGKVKNGANMSSVISVSEMCWGDVGLTLAMPRQGLGNS 113

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +A +     H+ +                     V   + +TE   G+D A I +    
Sbjct: 114 AIASVANDEQHERF-------------------DGVWAAMAITEPGTGSDSANIKTTATL 154

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D  Y L+G K F++S   SDA ++ A ++  +G   +   + +    G+  +RL++K+
Sbjct: 155 DGDH-YVLNGEKIFVTSGDRSDAVVVWATLDKELGKAAIKSFVVEKGTPGMKVERLEHKL 213

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAE-AI 336
           G +++ T  + F++        L      V++     +   D+    V+ M V  A  A+
Sbjct: 214 GIKASDTATITFTDCRVPAENLLGSPEINVKEGFAGAMATFDNTRPLVASMAVGCARAAL 273

Query: 337 HYARR--RHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            Y R                  Q         +  D   A  L  + A   D  +  S+E
Sbjct: 274 DYTRDLLEKAGVEIDYDRPAHLQSAAAAKFIQLESDYEGAYLLMLQAAWMADNRQPNSKE 333

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A+ A+  A        +M   V    +E  G  GY E   + +  R+S    I  G+   
Sbjct: 334 ASMAKAKAG-------RMGSDVTLSCVELAGTIGYSEGELLEKWARDSKILDIFEGTQQI 386

Query: 450 MVLDVLNLL 458
             L V   +
Sbjct: 387 QQLIVARRV 395


>gi|324508721|gb|ADY43679.1| Medium-chain specific acyl-CoA dehydrogenase 10 [Ascaris suum]
          Length = 205

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            + +  +G  ++ T  + F +        +     G +  MK       + A ++     
Sbjct: 10  GKKEMNMGQPASDTRAVTFEDVRVPAQNMVGAPGEGFIVAMKTFDKTRAEVAAIATGLSS 69

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L EA  YA  R   G  +     +   +AD+A+++  +  +++R A  + +   R   
Sbjct: 70  RCLDEAAKYALERKTFGVPIAQHQAVAFMLADMAINLELSRLITYRSAWEWMQGPPRG-- 127

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                  + I K +C   A    + A++ +GG+GY +E  + +  R++    I  G+   
Sbjct: 128 -----YFSSIAKCFCADTANIAASNAVQILGGNGYNKEYPVEKLMRDAKIMQIYEGTSQI 182

Query: 450 MVLDVLNLLEK 460
             + V   L K
Sbjct: 183 QRIIVAKDLLK 193


>gi|171057872|ref|YP_001790221.1| cyclohexanecarboxyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
 gi|170775317|gb|ACB33456.1| cyclohexanecarboxyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
          Length = 389

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 121/363 (33%), Gaps = 30/363 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            ALLR     G  C      F  +                A L   +L   +  +  +++
Sbjct: 41  RALLREMGELGFICPELPEEFGGLGMGCLAAGVIHEEIARADLSFSYLNLLASLNGQILS 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P V   W  K+   E                 + LTE RGG+D A +  + ++ SD
Sbjct: 101 KYGHPDVVGPWLKKLTRGE-------------AICAIALTEPRGGSDAANLRLRIERGSD 147

Query: 224 ---GIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
                Y ++G K  +S+   +D  ++  +      G   V  LL      G+   R  + 
Sbjct: 148 AQGDFYVINGEKTSISAADQADITVVFGRTGTPESGAHGVTALLVPMDSAGVTTNRF-DC 206

Query: 279 IGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            G R+     + F N    +   LGD N     V            +  +S  RV+L E 
Sbjct: 207 HGQRAIGRGSIFFENVRVPVSHRLGDENKGFVQVMHGFDFSRSLIGLQCLSVARVALEET 266

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             Y  +R   G  L     +   +A    ++  A  L  +     D     + EA  A+ 
Sbjct: 267 WEYITQRQAFGQPLSAFQGVTHPLAAYDTEVEGARLLCLQGLWLKDRGLPHTAEAGMAKW 326

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                  W  K+A  VI + + C G  GY     + +  R+     I  G+   M   + 
Sbjct: 327 -------WGPKLAYDVIHQCLLCYGHGGYDRG-LMEQRLRDVLGFQIGDGTAQIMKTIIA 378

Query: 456 NLL 458
            + 
Sbjct: 379 RVR 381


>gi|158523112|ref|YP_001530982.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511938|gb|ABW68905.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 397

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR 252
                 + +TE   G+D  +I +      D  + L+G K F++ +   DA ++ A V+  
Sbjct: 121 GGKWAAMAITEPESGSDSGSICTTAVLDGDE-WVLNGEKIFVTCADRCDAVVVWATVDKE 179

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVED 311
            G   +   + +    G   + L++K+G R++ T      +        L        E 
Sbjct: 180 AGKAGIKSFVVEKGTPGFKLEHLEHKLGIRASDTGTFVLKDCRIPKENLLGSSEVKKTEG 239

Query: 312 MK-ILIYLDSAIMSVSGMRVSLA-EAIHYARRR-HVSG------GILIDQPVMKRAIADI 362
            K ++   D+    V+ M   +A  A+ + R +   +G          +   +++    +
Sbjct: 240 FKGVMKTFDNTRPMVAAMANGVAKAAVDFTREKLEEAGYNLDYSKNPGNLSAVEKDFYWM 299

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              + A   L+ R A   D  +  + EA+ ++  A        +    +  +  E +G  
Sbjct: 300 EAHLDAMRLLTLRAAWMADNEEFNNLEASMSKAKAG-------RYGTLITQKCCELMGPL 352

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY  E    +  R+S    I  G+G    L +   +
Sbjct: 353 GYSRENLAEKWMRDSKILDIFEGTGQIQHLIIARNI 388


>gi|26989512|ref|NP_744937.1| acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
 gi|24984384|gb|AAN68401.1|AE016472_8 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440]
          Length = 390

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 137/396 (34%), Gaps = 57/396 (14%)

Query: 79  YNTPQLHAYGP-GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
            N P+ +++GP    R D V            +   GL      R    +  + +H  +A
Sbjct: 28  ENDPRQNSHGPSDALRQDLVLC----------ARAAGLLTPHASREMGGL--ELSHVAKA 75

Query: 138 ARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                         A ++ +P   +  ++ ++ T      W               P+ +
Sbjct: 76  IVFEEAGYSPLGPVALNIHAPDEGNIHLMDVVATEAQKDRWL-------------RPLVQ 122

Query: 194 TSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE 250
                   +TE     G+D + + +   +  D  Y ++G KW ++      F I++A++E
Sbjct: 123 GHARSCFAMTEPAPGSGSDPSMLRTTATRDGDD-YLINGRKWLITGAEGADFGIIMARME 181

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGF---LLGDL 302
                      L D   +G+ ++R  + +     G        L F N       +LG++
Sbjct: 182 DGTA----TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEI 233

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                  +       L   +  +   R +   A  YAR R   G  L +   +   +AD 
Sbjct: 234 GKGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADN 293

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
            +D+       +  A   D+ +  + +++ A++++    +        V+   ++ +GG 
Sbjct: 294 MMDLHVVRLAVWHCAWVLDQGRRANVDSSMAKVISAEALW-------RVVDRCVQVLGGR 346

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G   +  + R +R+     I  G      + +   L
Sbjct: 347 GVTGDTVVERIFRDIRPFRIYDGPSEVHRMSLAKKL 382


>gi|302869275|ref|YP_003837912.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572134|gb|ADL48336.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 657

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 151/433 (34%), Gaps = 59/433 (13%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWH 104
            LI  +P     E+    E++ S      A + +    +         R     FH    
Sbjct: 59  DLIDPWPRPDPAEVARADEFLGSLR----AYLTSEVDGEAIERDA---RIPDEVFH---- 107

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
                    G      DR +  +     H  RA  L          L+S   S+     +
Sbjct: 108 ----GLAGLGTFGMKIDRKYGGLGLSNLHYCRALMLVGSVNPAVSALLSAHQSIGVPQPL 163

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  TP   + + P++ + E                   LTE   G+D A + +  +  +
Sbjct: 164 KMFGTPEQKERFLPRLAAGE--------------VSAFLLTEPDVGSDPARLATTAEPTA 209

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K W  +  ++   +++A+V  G      +   + +G  +G+  +R  + +
Sbjct: 210 DGTGYRLNGVKLWATNGTLATLLVVMARVPAGEGRRGGITAFVVEGDSDGITVERRNSFV 269

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-----VSGMRVSLA 333
           G R        F + F       NV  G  + +KI L  L++  +S     V   + +L 
Sbjct: 270 GLRGLENSLTRFHDVFVP---KENVIGGEGKGLKIALTTLNTGRLSLPAMCVGAGKWALN 326

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +A  R   G  + +   + + +A I        ++        D+ ++        
Sbjct: 327 VAREWAADRVQWGRPVGEHEAVAKKLAFITATTYGMESMLDLSCMLADDDRNDIR----- 381

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--------ERS--IARHYRESPANSIL 443
            I A + K +  +MA  +  E ++  GG GY          ER   + +  R+   N I 
Sbjct: 382 -IEAALVKLYASEMAWRIADELIQIRGGRGYETADSLAARGERPAAVEQLLRDLRINRIF 440

Query: 444 LGSGNAMVLDVLN 456
            GS   M L +  
Sbjct: 441 EGSTEIMHLLIAR 453


>gi|325929652|gb|ADZ45334.1| acyl-CoA dehydrogenase [Streptomyces sp. NRRL 30471]
          Length = 392

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 135/408 (33%), Gaps = 46/408 (11%)

Query: 75  RMANYNTPQLHAYGPGGERW----------DKVEFHPA--WHALLRRSIHDGLHCSIWDR 122
           R    + P L ++     R           D  E  P     A+ RRS   G +   +  
Sbjct: 10  RYTREHLPVLESFRAFVRRELVPLASETSGDSAERIPDDISEAVRRRSAELGFYAGDYPE 69

Query: 123 SFEPVVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180
                    A K         +   L    L  P   SA +  L  TP     +      
Sbjct: 70  EVGGQDMPFAAKTLLHEYAEEVGCPLAPVALCGPEGPSALL--LSATPGQRVRYLK---- 123

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239
                    P+   +    L +TE  GG+D   + ++  +   G + L+G K F+S+   
Sbjct: 124 ---------PLVAGAAVRSLAMTEPEGGSDAFDLATRAVRDGAG-WVLNGRKTFVSNAEK 173

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +D  ++ A  E   G +     + +    G    +    +G    +  EL   +      
Sbjct: 174 ADFTLVFATTESDRGTWTPAVFIVEAGTPGFTVGQRYEGLG--GESVFELLLEDVRVGEE 231

Query: 300 GDLNVSTGPVEDMKIL-IYLDSAIMSVSGMR-----VSLAEAIHYARRRHVSGGILIDQP 353
             L       + ++I    L    + V+         +LA  + +AR R   G  +    
Sbjct: 232 ALLGGLARLDQGVRIGQEALARGRLMVAAAANGIATRALALGLDFARERVSLGRRIARHQ 291

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  +    + + A+  L++  A + DE     E  A A++ A          A  V+ 
Sbjct: 292 HVQEHLVTSRVSLEASKMLTYAAAQNLDEGLDVMEATAVAKLAAA-------DTACDVVD 344

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
              +  GG+ +++   +   YR      I+ G+     + + N +  G
Sbjct: 345 RMFQVHGGTAWVKGHPLEYLYRHVRVLRIVEGTSEIQKVIIANAMGLG 392


>gi|116334473|ref|YP_796000.1| Acyl-CoA dehydrogenase [Lactobacillus brevis ATCC 367]
 gi|116099820|gb|ABJ64969.1| butyryl-CoA dehydrogenase [Lactobacillus brevis ATCC 367]
          Length = 372

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 113/375 (30%), Gaps = 42/375 (11%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           PQ       G+        PA    + +    G    +  + F                 
Sbjct: 25  PQDMPMDAAGD-------FPAGF--MEKLTATGFLGLMLPQEFGGAGFGPEITATVLNHI 75

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                     +     +   +    TP + +   P                 T       
Sbjct: 76  ARGNASTAVTLEGHFKTIDQLLKYGTPALQQQLLP---------------TATDRIFAFS 120

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE  GG++  +I+S   +  +            +  +++ + +L +         +   
Sbjct: 121 MTEASGGSNPMSISSTATREGNHWVLNGDKIMITNGGLAEVYCVLVKTAPTE----LSVF 176

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           + D    G  + + ++ IG R     E+        +  D  +       +      D A
Sbjct: 177 VVDQDMPGFSFGKREDFIGLRGTPVGEIVMD--HIVVDDDHLLGNLGDGGLIGDSAHDDA 234

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            + +  +   + E     A  YA+ R      L    V +R +AD+A+       L  + 
Sbjct: 235 RVLMGAVLTGIMEHELKIATDYAKERKAGDQPLTALQVTQRKVADMAIRKETTKLLYQQA 294

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A+     +  SE AA A       K    + A +   +A++ + G GY  E  +    R+
Sbjct: 295 AHLKALGQPYSELAAMA-------KAHGSRAAVSAGDDALQILAGYGYSREYPVEHLIRD 347

Query: 437 SPANSILLGSGNAMV 451
           + A  I  G+   M 
Sbjct: 348 ARALEIAEGTVEKMR 362


>gi|170732989|ref|YP_001764936.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169816231|gb|ACA90814.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 388

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 119/367 (32%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    PA           G      D ++              R     
Sbjct: 22  RFGDDYWLERDRAGGFPA--DFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +T+Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLTTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDQVAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N   +   L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVSRDDLIGNEGDGFHYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFQACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|262204399|ref|YP_003275607.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087746|gb|ACY23714.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 428

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/437 (15%), Positives = 124/437 (28%), Gaps = 46/437 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++    L A +    + +  E+  L        A +  R  ++              W++
Sbjct: 3   FALPEDLRAYLDELDAFIEAEIVPL------EQADDNIRFFDHRREDART------DWER 50

Query: 97  VEFHPA-WHALL----RRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQ 145
                A W ALL    RR+   G     +   +                  +  L L   
Sbjct: 51  GGLPNAEWEALLGEARRRADAAGHFRYPFPAEYGGRDGSNLAMAVIREHLASRGLGLHCD 110

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L+  H +  +     ++    TP   ++W   +                +     G+TE 
Sbjct: 111 LQNEHAIVGNNIGLLLMLEYGTPEQQQEWVEGL-------------AAGTKFFAFGITEP 157

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLED 264
             G+D   + +   +  D         W     ++   I+ A+ +G  G    +   L D
Sbjct: 158 DHGSDATYMETTAVRDGDEWVINGEKTWNTGIHVAHRDIIFARTDGEPGNARGITAFLVD 217

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              +G   +       N       +   +       + G        V+       +  A
Sbjct: 218 PQADGFTVEEYLWTF-NMPTDHAHVTLRDVRVPHSAIFGAEGAGLQVVQHFFNENRIRQA 276

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  +  A+ YA  R   G  L     ++  + D+    A   +L    A   D
Sbjct: 277 ASSLGAAQYCVDRAVAYANERAPFGKKLSTNQAIQFPLVDLHTRCAMIRSLIRETAWKMD 336

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +     A     +  Y   ++       AM+  GG GY         YR      
Sbjct: 337 TYGPFA-----ASAEVSMCNYQANRLCCDAADTAMQVFGGRGYSRHEPFEHIYRHHRRYR 391

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+    +  V   L
Sbjct: 392 ITEGADEIQMRRVAGYL 408


>gi|226364020|ref|YP_002781802.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242509|dbj|BAH52857.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 420

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 122/388 (31%), Gaps = 24/388 (6%)

Query: 82  PQLHAYGPGGERWDKVE---FHPAWHALL----RRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           PQ   +     R D          W  LL    RRS   G       ++           
Sbjct: 32  PQFFDHRREYARTDWERDGFPQQEWRDLLLEARRRSDAAGFFRFPLPQALGGNDGSNLAM 91

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
               R +L+ +    H    S  ++ +  L     +H+   P     E       P+ + 
Sbjct: 92  AVV-REHLLTRGSGLHF-PHSDEASVVANLPLALVLHEYGTP-----EQREQYLEPLIRG 144

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
            + I  GLTE   G+D   + +  ++  D        ++      S+  ++ A+  G+ G
Sbjct: 145 DIEIAFGLTEPGHGSDATYLETTARRHGDDWVITGAKRFNSLVDCSEVDLVFARTSGQAG 204

Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
               +   L      G           N  +   E+   +        +      ++  +
Sbjct: 205 KADGITAFLVPTDAPGFSVPFNHWTF-NMPSDHSEVHLDDVRVPAGAVVGEVGRGLDCAQ 263

Query: 314 ILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
           + +    +  A  S+   +  + E++ YA+ R V G  L +   ++  + ++  D     
Sbjct: 264 LFVHENRIRQAASSLGAAQYCIDESVRYAQERVVFGKPLHEHQGIQWQLVELQTDAELIR 323

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
              ++ A   DE    +           +      ++A      A++  GG GY   +  
Sbjct: 324 NTIYKTAAMMDELGKTA-----VTDKVAMVNLRSNQLACRAADRAIQIHGGVGYTRHKQF 378

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
              YR      I  G+    +  + + +
Sbjct: 379 EHIYRHHRRYRITEGTDELQLRRIASRM 406


>gi|258512357|ref|YP_003185791.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479083|gb|ACV59402.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 408

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 121/374 (32%), Gaps = 30/374 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G + ++    P   AL  R    G H     +                   +       
Sbjct: 45  WGAQIERDARIPE--ALWARIRELGFHKLTQPKWVGGEGLPLGLYFPILE-EVAHMHGTI 101

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +M  +  S        T    + W  K+                   +   LTE   GT
Sbjct: 102 RMMVHAYNSIWRTVGQGTREQQEYWLKKLV-------------NEGALVAFALTEPDNGT 148

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            I  + +     +              +  +    ++A++EG  G   +   L      G
Sbjct: 149 GI-DLRTIATYENGKFVLNGRKHLITFAEEAAVIAVIAKMEGGAGRTGLTAFLVPQGRKG 207

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    + + +G++  +   +EF N        L    G    + +  +LD +   ++   
Sbjct: 208 MKLTPMPHMMGDKGCSHAVIEFENCEVGEDEVLG-EIGEGFGVAVRGFLDQSRACIAQSA 266

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V LA+     A+ + RRR   G  L  +  ++  +A++ + I  A  L    A  +D+ +
Sbjct: 267 VGLAQEALDRALDHVRRRTTFGKALASRQAVQMRLAEMQIAIQGARLLCLDAAYKYDQGR 326

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EAA       I K    +M   V   A+   GG GY     + R YR++ +     
Sbjct: 327 DISLEAA-------IAKANAIRMVGEVTDGALSLYGGIGYAVTSPVERLYRDARSLWFEE 379

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 380 GTLEMQKMTIAEAL 393


>gi|257063640|ref|YP_003143312.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
 gi|256791293|gb|ACV21963.1| acyl-CoA dehydrogenase [Slackia heliotrinireducens DSM 20476]
          Length = 385

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 109/355 (30%), Gaps = 26/355 (7%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
             +G         +  +   +   +      L       H++  +  S   +    T   
Sbjct: 47  AENGFGLMGIPEEYGGIPCDKV-TLGLMIEELYRSSGCMHILYQNSLSMFDIMEFGTEEQ 105

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
            +          +                L ++E   G+D  ++T    K  DG Y L+G
Sbjct: 106 KQQAVEHYMETGWP------------IASLSISEPGAGSDNGSMTCTAVKQEDGTYRLNG 153

Query: 231 HKWFLS-SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K +++        I++A+  +       +     +    G+    L +KIG +     E
Sbjct: 154 QKTWVTMGAKLPYTIVVAKDEDPSRENRNMSLWYINMDREGVSTAPL-HKIGQQCIPFCE 212

Query: 289 LEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           +   N        +     G +  MK             V   + +L +A  YA +R   
Sbjct: 213 VYLDNVVVTEEDRMGEPGKGFMMLMKNFEVERAFIVAEQVGLAQAALEDATKYANQRIAF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  +  Q ++   + D+ + +     + ++     D       E+A  +        + C
Sbjct: 273 GKPIARQEIIMEYLTDMEIAVQNTRNMLYKTLWQLDNGIPVQLESALLKR-------YGC 325

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                V  +A+    G GY  E  I R + +   N    G+   M       + K
Sbjct: 326 SECFKVADKALGIYAGLGYTTEVRIGRIWADLRGNMFGGGTHEIMAYIAGRQVAK 380


>gi|322705469|gb|EFY97055.1| acyl-CoA dehydrogenase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 441

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 131/367 (35%), Gaps = 34/367 (9%)

Query: 105 ALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            L    IHD  G+    WD     +   +  +   A             + P       +
Sbjct: 83  WLKDLGIHDILGVKVEEWDYLHTGIYCDELARSGLAGPGASLTAGFAFGIPP-------I 135

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +  + + + P   +                   + +TE   G+D+A IT+  +K +
Sbjct: 136 VKWGSKELKQRFLPDFLTG-------------RKRTCIAITEPDAGSDVANITTTAEKTA 182

Query: 223 DGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIG 280
           DG  Y ++G K ++++ +   +  +A   G  G   +  ++       G+  +RL    G
Sbjct: 183 DGKHYIINGAKKWITNGIWSDYTTMAVRTGGAGRAGLSVIIVPLKGHPGVTMRRLPVG-G 241

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T  +E  N       LLG        +        L  A+      R +LA A  
Sbjct: 242 QKAGGTTYIELDNVKVPVENLLGREGDGLRIILTNFNHERLIIAVGVTRQARTALAAAFE 301

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIM 396
           Y  +R   G  L+DQPV++  +A    ++    A + +L   +      S+EA      +
Sbjct: 302 YCLKRDAFGKKLMDQPVVRHRLAKAGAELETMNAWTEQL--LYQLCHLSSQEADLKLGGI 359

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLD 453
             + K     +       A+   GG+G+    +   +   YR+ P   I  GS + ++  
Sbjct: 360 TALAKAKSAMVLNECAQVAVLLFGGNGFTASGQGALVEAIYRDVPGARIPGGSEDVLLDL 419

Query: 454 VLNLLEK 460
            +  L K
Sbjct: 420 AVRQLVK 426


>gi|218288745|ref|ZP_03493008.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241103|gb|EED08279.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 408

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 121/374 (32%), Gaps = 30/374 (8%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            G + ++    P   AL  R    G H     +                   +       
Sbjct: 45  WGAQIERDARIPE--ALWARIRELGFHKLTQPKWVGGEGLPLGLYFPILE-EVAHMHGTI 101

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            +M  +  S        T    + W  K+                   +   LTE   GT
Sbjct: 102 RMMVHAYNSIWRTVGQGTREQQEYWLKKLVDE-------------GALVAFALTEPDNGT 148

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
            I  + +     +              +  +    ++A++EG  G   +   L      G
Sbjct: 149 GI-DLRTIATYENGKFVLNGRKHLITFAEEAAVIAVIAKMEGGAGRTGLTAFLVPQGRKG 207

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           +    + + +G++  +   +EF N        L    G    + +  +LD +   ++   
Sbjct: 208 MKLTPMPHMMGDKGCSHAVIEFENCEVGEDEVLG-EIGEGFGVAVRGFLDQSRACIAQSA 266

Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           V LA+     A+ + RRR   G  L  +  ++  +A++ + I  A  L    A  +D+ +
Sbjct: 267 VGLAQEALDRALDHVRRRTTFGKALASRQAVQMRLAEMQIAIQGARLLCLDAAYKYDQGR 326

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             S EAA       I K    +M   V   A+   GG GY     + R YR++ +     
Sbjct: 327 DISLEAA-------IAKANAIRMVGEVTDGALSLYGGIGYAVTSPVERLYRDARSLWFEE 379

Query: 445 GSGNAMVLDVLNLL 458
           G+     + +   L
Sbjct: 380 GTLEMQKMTIAEAL 393


>gi|307326174|ref|ZP_07605371.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306888117|gb|EFN19106.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 400

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 69/363 (19%), Positives = 127/363 (34%), Gaps = 35/363 (9%)

Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           P    L   +   G+        +  +      QA    AA   L+  L A +  +P   
Sbjct: 43  PLRRRLQDAAREAGVFAPHVGAEWGGLGLDLCGQAVVFEAAGYSLLGPL-ALNCAAPDEG 101

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAIT 215
           +  ++ ++ T    + +               P+          +TE     G+D  A+T
Sbjct: 102 NTHLLEVVATEEQKERYL-------------RPLAAGEARSCFAMTEPAPGAGSDPRALT 148

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQ 273
           +   KI DG + L G KWF+S     AF I +A+  G  G        L      G+   
Sbjct: 149 TTATKI-DGGWRLDGRKWFISGADGAAFAICMARTSGGPGDPGGATMFLVAADNPGMKIV 207

Query: 274 RLKNKI--GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           R  + +  G     + E+ F         +LG+++      +       +   +  +   
Sbjct: 208 RNIDTLDQGLFGGHS-EIAFEGCEVADDAVLGEVDEGFAYAQVRLGPARMTHCMRWLGVA 266

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+  A  R   G  L +  ++++ +AD  +DI  + A+ +R     D+ +    
Sbjct: 267 RRAQDIALERAADRSAFGKPLAELGMVQQLLADSEIDIETSRAVLWRACWELDQGRP--- 323

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A     I K +  +    V+  A++  G  G   +  ++R YRE     I  G   
Sbjct: 324 ----AAQHTSIAKTYVSEAVNRVVDRAVQICGALGISGDAPLSRLYREVRPFRIYDGPSE 379

Query: 449 AMV 451
              
Sbjct: 380 THR 382


>gi|316935440|ref|YP_004110422.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           DX-1]
 gi|315603154|gb|ADU45689.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           DX-1]
          Length = 383

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 127/397 (31%), Gaps = 39/397 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L+  A+  A  A    P            D+         L++     G        + 
Sbjct: 11  ALTGQARRFA--AEQVAPGFQERDRT-RVLDR--------GLMKAMGEMGFIAPELPEAC 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                A L   ++   +  +  +++    P + + W  K+ + E  
Sbjct: 60  GGLGMGSLAAGVIHEEIARADLSMSYVNLLASLNGQILSQHGRPEIVQPWLTKLIAGE-- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          + LTE RGG+D A +  + ++  D  Y ++G K  +S+       
Sbjct: 118 -----------ALFAIALTEPRGGSDAANLRLRIERDGDD-YIVNGEKTSISAADQADAA 165

Query: 245 MLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
           ++    G +  G   V  LL      G+   R  +  G R+     L F N        L
Sbjct: 166 VVFGRTGSIESGAHGVTALLIPMDLPGVTRSRF-DCHGQRAIGRGSLFFENVRVPAAHRL 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD N     V            +  ++  RV+L E   +   R   G  L     +   +
Sbjct: 225 GDENKGFVQVMQGFDFSRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L  +     D     S EAA  +  AP       K+A  VI + +   
Sbjct: 285 ADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKWWAP-------KLAYDVIHQCLLMH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  GY     + +  R+     I  G+   M   +  
Sbjct: 338 GHGGYDRG-PMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|269216717|ref|ZP_06160571.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129862|gb|EEZ60945.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 387

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 12/274 (4%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252
             +   L ++E  GG+D   + +      DG   L+G K F+++     ++++A ++G  
Sbjct: 117 GRLMFALAISEPEGGSDAMGMKTT-VATVDGRLILNGRKTFVNNGEYAPYLLIAAIDGDL 175

Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307
             V    +   L      G+    +K K G       ++   N      + L        
Sbjct: 176 EPVKHPPLSLWLLPHGLEGISVYPIK-KAGQSILPFSDVIMENVVLDESYRLTGSEPGFP 234

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            +     +  + S   ++   R ++ +A+ YA +R   G  +ID  ++++ + D+ +D+ 
Sbjct: 235 QLFRFFDIGRIFSCATALGLARAAMEDAVAYASKRQAFGADIIDFQMIQQMLVDMEIDVR 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A     +R A   D      E    +R+   + K +  + A  V + AM+ +GG GYI +
Sbjct: 295 AMRDSVYRTAREADRHGHTRE----SRLSIALMKRFVPETATKVASNAMQILGGRGYIND 350

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461
             ++  +R+     I  G+   MV     LL++ 
Sbjct: 351 ERVSMIWRDCRGFQIAEGTDQIMVRIAAPLLKEA 384


>gi|330835653|ref|YP_004410381.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567792|gb|AEB95897.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 386

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 133/366 (36%), Gaps = 30/366 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--M 161
           H  ++++   G+      +              A+     A       +   + S    +
Sbjct: 38  HEFVKKASSLGIWAMTTSQDVGGQGASFLLSTIASEEIARADFSMATAVLFLLESGWGYV 97

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +  + +D  P++ + ++              +G+  TE  GG+D+A I +  +K 
Sbjct: 98  LDKYGSKNLREDILPRVTAGDWF-------------LGIASTEPSGGSDVAGIRTTAKKE 144

Query: 222 SDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
               + L G K ++S            + LA+         +       S  G+   +++
Sbjct: 145 G-TKFVLGGQKIYISGVLEALHWGGGHLTLAKTNLEAKHRGISMFYVPTSSPGVEVSKIE 203

Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           N +G    ++  + FSN       L+G+LN       D      +  A   +      L 
Sbjct: 204 N-MGRAGISSGIITFSNAQIPEENLVGELNKGFYYAMDGFNHARVLVAGACIGAAEAILE 262

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + Y ++R V    L D   +    A++   +  A  L+++ A   D +   S+E A  
Sbjct: 263 IGLEYIKQREVFSTKLKDFEAIAFEAAELKTKLEMAKLLNYKAAWMMDRS-PNSDETAM- 320

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL-LGSGNAMVL 452
             +A ++K    ++A  +    M  +G  GY ++  +   +R + +  +   G+ N M L
Sbjct: 321 --LAAMSKLTAPQVAFEITKSVMMWMGAYGYSKDALVEMGFRGAMSYLVGAEGAMNVMKL 378

Query: 453 DVLNLL 458
            +   L
Sbjct: 379 IISKRL 384


>gi|254501026|ref|ZP_05113177.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222437097|gb|EEE43776.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 388

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 111/364 (30%), Gaps = 32/364 (8%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL--MAQ 145
                  DKV   P      +     G        ++              R      A 
Sbjct: 25  DAYWLEKDKVGGFPT--EFFQALAQAGWLGICIPEAYGGTGLGITEAAIMMRTIAESGAG 82

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L     +  ++   S V +  T    +   P             P+          +TE 
Sbjct: 83  LSGASAVHMNIFGLSPVVVFGTEEQKRRMLP-------------PVVAGQERTCFAVTEP 129

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + +  ++  D         W  ++ +++  ++LA+             +   
Sbjct: 130 NTGLNTTHLKTAARRQGDRYVVNGQKVWISTAQVAEKILLLARTTPLEEVEKPTQGLSLF 189

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYL 318
             D + + +  + + +K+G ++    EL F +       L+GD       +        +
Sbjct: 190 YTDFNRDQITVREI-DKMGRKTVDCNELFFEDFEIPAENLIGDEGEGFRAILHGMNPERI 248

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                ++     +L +A  YA+ R V    +     ++  +A   + + +A  ++   A 
Sbjct: 249 LIGSEAIGLGHAALRKACAYAKERVVFDRQIGQNQGIQHPLARNWMMLESAWLMALEAAR 308

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D               A  TKY   +       +A+   GG GY  E  + R+ RE+ 
Sbjct: 309 QYDAGLPCG-------PAANATKYLGSEAGFEACQQAVMTHGGFGYAREYHVERYMREAM 361

Query: 439 ANSI 442
              +
Sbjct: 362 IPRL 365


>gi|163854349|ref|YP_001628647.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804]
 gi|163258077|emb|CAP40376.1| acyl-CoA dehydrogenase [Bordetella petrii]
          Length = 408

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 138/417 (33%), Gaps = 60/417 (14%)

Query: 81  TPQLHAYGPGGER-WDKVEFH----------------PAWHALLRRSIHDGLHCSIWDRS 123
            P+L  Y     R  D+                    P       +    GL      R 
Sbjct: 6   PPELEDYRSRVRRFVDEELIPLEADPGNFDDHENIAEPVLARARAKVREAGLWALQMPRE 65

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLM----SPSVTSASMVALMTTPRVHKDWAPKIF 179
                        AA    M +   G +     +P   +  ++A +  P     W     
Sbjct: 66  RGGQGLP--MVGLAACYEEMNRSIFGPVCFNAAAPDDGNMRVLAQVARPDQKDRWL---- 119

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                     P+    V     +TE     G+D + + +   +  D  + ++G KWF++ 
Sbjct: 120 ---------QPIIDGKVRSSFVMTEPSPGSGSDPSMMRTTATRQGD-KWIVNGRKWFITG 169

Query: 238 -PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN--RSNATVELEFSNT 294
             ++  FI++A+         +   L D +  G   +R    +G         EL F   
Sbjct: 170 AGVARHFILIARTSDDA-RKGLSAFLFDAAQPGWRIERRIPIMGPEEHGGH-CELIFD-- 225

Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGI 348
            G  + D N      + +K   I L  A ++     +   R ++A A+ Y  +R   G  
Sbjct: 226 -GLEIPDENRLMEVGDGLKLTQIRLGPARLTHCMRWLGLARRAMAVAVDYVGQRSSFGLK 284

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L ++  ++  + D A+ I     L+ R A   D+         YAR    + K    +  
Sbjct: 285 LAEREGVQWLLGDAAMQIEIGRLLTMRAAARLDQGD-------YARKEISMAKIVVSETL 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
             V+  A++  G  GY ++  +   YR +    ++ G+     + +   L    + +
Sbjct: 338 HKVVDTALQLNGARGYSKDTPLEWIYRYARQARLVDGASEVHKMVLARYLMDEGDAY 394


>gi|85708702|ref|ZP_01039768.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85690236|gb|EAQ30239.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 388

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 125/353 (35%), Gaps = 43/353 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +      G   ++    F             A   +M +++A      S  +   +  
Sbjct: 41  EFVDALTQAGFLAALIPEEFGGSGLSL-----DAAAVIMEEIQATGCNGSSAHAQMYIMN 95

Query: 165 ----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
                 +     ++ PKI   +                  G++E   GTD  ++ ++  +
Sbjct: 96  TLLKYGSDDQKAEYLPKIARGDLR------------LQAFGVSEPTSGTDTLSLKTRAVR 143

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSP---NGLCY 272
             D  Y +SG K + S +  SD  ++LA+   R         +   L D      NG+  
Sbjct: 144 EGDE-YVVSGQKIWTSRAEHSDLMLLLARTTPRDQVEKKTDGLSIFLVDMQEALKNGMSI 202

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           + ++  + N S+   E+ F +       L+G+       +        +  A   +   +
Sbjct: 203 KPIRTMM-NHSS--CEVFFDDLRIPASSLVGEEGKGFRYILSGMNAERILIAAECIGDAK 259

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             + +A +YA  R+V    +     ++  IA     + AA  +    A  +DE  +   E
Sbjct: 260 WFIEQAKNYAGDRNVFARPIGQNQGVQFPIARCYAQMRAAELMVHHAAQVYDEGGNPGAE 319

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A  A+++A    +    M        ++  GG G+ EE  + R +RE+   ++
Sbjct: 320 ANMAKLLASEASWAAADM-------CVQTFGGFGFAEEYDVERKFREARLYTV 365


>gi|313885733|ref|ZP_07819482.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619098|gb|EFR30538.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 401

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 115/325 (35%), Gaps = 31/325 (9%)

Query: 141 YLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           YLM++ +   A               L  +P   + W PK+             Q   + 
Sbjct: 94  YLMSRFDTSIATFFGVHGGLGYYTFLLGGSPEQVERWVPKL-------------QNFELQ 140

Query: 198 IGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGC 255
              GLTE   G+DIA  + +   +  D        +W   +  +D   + A+  E     
Sbjct: 141 TCFGLTEPEHGSDIAGGLATTATRQGDKWIINGEKRWIGGAGSADVLPIFARDTEDNK-- 198

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315
             +   + +    GL   +++NKI  R      +   +        L    G  +  ++L
Sbjct: 199 --IKCFILEKGQKGLTIDKIENKIALRMVQNGHITMKDVEVADDHRLVNINGFKDVARVL 256

Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                  A ++      +   A+ Y + R      L++  +++  +A +  ++ +  AL 
Sbjct: 257 YVTRSGVANLAAGNSAGAFRAALKYTKERKQFTKSLVEFQLVQEKLARMQANVISELALI 316

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            ++A      +       +  + + I K +    +   +A A E  GG+G   +  +AR 
Sbjct: 317 TQIAKLQTSGE-------FDEVRSSIAKMFNSLRSRETVALAREVCGGNGITYDYDVARF 369

Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458
           ++++ A     G+     L +   +
Sbjct: 370 FQDAEAIYTYEGTHEVNSLVIGRAI 394


>gi|115402243|ref|XP_001217198.1| hypothetical protein ATEG_08612 [Aspergillus terreus NIH2624]
 gi|114189044|gb|EAU30744.1| hypothetical protein ATEG_08612 [Aspergillus terreus NIH2624]
          Length = 432

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 112/379 (29%), Gaps = 39/379 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ-------------AHKIRAARLYLMAQLEAGHL 151
              R +   G +     + +      +             +H +    L L   L+  H 
Sbjct: 54  QARRLADSAGFYRFALPKMYGGQGHPETNVWMSAIRFHLSSHPVYGGGLGLANDLQNEHS 113

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +     M+    T    +   PK    E+  T              GLTE   G+D 
Sbjct: 114 VVGNFPDVLMIHHFGTEEQKRTLIPKRLRGEFRAT-------------FGLTEPDHGSDA 160

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGL 270
             +++  +++ DG       KW   +      I+ A+   + G    +   L      G+
Sbjct: 161 TFMSTVAKRVGDGFEITGRKKWQTGAHHCTHMIIFARTSNKSGSAKGITAFLVPRETPGI 220

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                +    N       +E    +     +LG ++      +       +  A  S   
Sbjct: 221 RVSSFEWTF-NMPTDHATVELDKVWVPASAVLGQVDFGLAIAQTFVHENRIRQAASSCGA 279

Query: 328 MRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            +  L  +I  AR R + G    L D   ++  + ++   +     L  + +   D   +
Sbjct: 280 AKYCLDRSIERARSRKIWGEGRSLADHQAIQFPVVELMTQVEMLRLLILKTSWDMDRIVA 339

Query: 386 RSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            S    +            +  +W  ++       A++  GG GY         YR    
Sbjct: 340 SSTTTPWIRIEKELSDKVAMCNFWANRLCCEAADRAIQIHGGDGYSRHYPFEHIYRHFRR 399

Query: 440 NSILLGSGNAMVLDVLNLL 458
             I  G+    +  +   L
Sbjct: 400 YRITEGAEEIQMRKIAAYL 418


>gi|320032216|gb|EFW14171.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 424

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 119/350 (34%), Gaps = 29/350 (8%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+    WD     VV  +  ++  + + L        +  P       +    T +   
Sbjct: 84  AGIDPEKWDVFHNLVVNDELARVGFSGV-LWGMNGGNGIGCP------PIMNFGTEQQRL 136

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
           ++ PK+   E                 LG+TE   G+D++ I +  + + +        K
Sbjct: 137 EYLPKVARGEIR-------------FCLGITEPDAGSDVSGIKTTAKGVGNKYIVNGAKK 183

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           W +++ +   +   A   G  G   +  L+      G+  +R+ N  G  ++ +  LEF 
Sbjct: 184 W-ITNAIFADYCTAAVRTGGPGRNGISLLIIPLKSKGVTRRRMYNS-GVNASGSTFLEFD 241

Query: 293 NTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       L+G  N     +        L  A   +   RV + +A +YA  R   G  L
Sbjct: 242 DVEVPAENLIGKENQGFKYIMSNFNPERLGMASSCIRLSRVCVEDAYNYAITRETFGKPL 301

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           I   +++   +     I    A   +LA +         E      M  + K    +   
Sbjct: 302 IYNQIIRAKFSKFGQLIEPCQAFLEQLAYTIQLNAKTGREID-VGGMTALLKVMSTRCLE 360

Query: 410 AVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLN 456
            V  EA + +GG+GY    +   I    R+     +  GS   +    + 
Sbjct: 361 KVCREAQQILGGAGYNKAGKGARIEAISRDVRVFVVGGGSEEILRDLAVR 410


>gi|114794826|pdb|2IX6|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794827|pdb|2IX6|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794828|pdb|2IX6|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794829|pdb|2IX6|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794830|pdb|2IX6|E Chain E, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
 gi|114794831|pdb|2IX6|F Chain F, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4
          Length = 449

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      +  +    G+          P +   A+ I  A +  +    +  ++ 
Sbjct: 82  WEKAEFP---FHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILV 138

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +AL  +    + + P +              + +      LTE   G+D + 
Sbjct: 139 HSSLGMLTIALCGSEAQKEKYLPSL-------------AQLNTVACWALTEPDNGSDASG 185

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  +S  +D  I+ A+         +   +      GL   
Sbjct: 186 LGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR---NTTTNQINGFIVKKDAPGLKAT 242

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           ++ NKIG R     ++   N F      L       +  K+L    +  A   +      
Sbjct: 243 KIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGI 302

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ +  +  ++ A   + +RL   ++  +       
Sbjct: 303 YDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQ------- 355

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A    +   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 356 MTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 415

Query: 452 LDVLN 456
           L    
Sbjct: 416 LVTGR 420


>gi|226954073|ref|ZP_03824537.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|226835198|gb|EEH67581.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244]
          Length = 399

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 124 KGTWAAMAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADSVVVWATLDKK 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +     +  L      V+ G
Sbjct: 183 LGRAAIKSFVVTKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAVNLLGNPDIDVAKG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 243 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYQTPYLQSSN 293

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 294 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 346

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 347 CVELAASVGYGEDELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|15231059|ref|NP_190752.1| ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase
           [Arabidopsis thaliana]
 gi|62286630|sp|Q96329|ACOX4_ARATH RecName: Full=Acyl-coenzyme A oxidase 4, peroxisomal; Short=AOX 4;
           AltName: Full=G6p; AltName: Full=Short-chain acyl-CoA
           oxidase; Short=AtCX4; Short=AtG6; Short=SAOX
 gi|114794822|pdb|2IX5|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794823|pdb|2IX5|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794824|pdb|2IX5|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|114794825|pdb|2IX5|D Chain D, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis
           Thaliana, Acx4 In Complex With Acetoacetyl-Coa
 gi|1657621|gb|AAB18129.1| G6p [Arabidopsis thaliana]
 gi|3068711|gb|AAC14411.1| putative acyl-coA dehydrogenase [Arabidopsis thaliana]
 gi|5478795|dbj|BAA82478.1| Short-chain acyl CoA oxidase [Arabidopsis thaliana]
 gi|20453143|gb|AAM19813.1| At3g51840/AtG6 [Arabidopsis thaliana]
 gi|21593380|gb|AAM65329.1| acyl-coA dehydrogenase [Arabidopsis thaliana]
 gi|21928035|gb|AAM78046.1| At3g51840/AtG6 [Arabidopsis thaliana]
 gi|332645330|gb|AEE78851.1| acyl-coenzyme A oxidase 4 [Arabidopsis thaliana]
          Length = 436

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      +  +    G+          P +   A+ I  A +  +    +  ++ 
Sbjct: 82  WEKAEFP---FHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILV 138

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +AL  +    + + P +              + +      LTE   G+D + 
Sbjct: 139 HSSLGMLTIALCGSEAQKEKYLPSL-------------AQLNTVACWALTEPDNGSDASG 185

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  +S  +D  I+ A+         +   +      GL   
Sbjct: 186 LGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR---NTTTNQINGFIVKKDAPGLKAT 242

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           ++ NKIG R     ++   N F      L       +  K+L    +  A   +      
Sbjct: 243 KIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGI 302

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ +  +  ++ A   + +RL   ++  +       
Sbjct: 303 YDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQ------- 355

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A    +   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 356 MTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 415

Query: 452 LDVLN 456
           L    
Sbjct: 416 LVTGR 420


>gi|301629373|ref|XP_002943817.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 344

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 123/397 (30%), Gaps = 72/397 (18%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             A  +AR A           P     D+       H L  +    G+            
Sbjct: 12  AIADAVARFAT------EILAPRAREIDEHGLSSTCHVL--QLAELGVMGMNLPEHLGGA 63

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                  + +             ++         V +  +   H  W P+  + E+    
Sbjct: 64  GVTPTAMLLSLVEISRVCAATSSMIGAHYLGTDAVLIGGSSEQHAQWLPRAANGEW---- 119

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFI 244
                      G  LTE RGG+  A + ++  +   G    Y + G K F+S+     F+
Sbjct: 120 ---------LAGFALTEPRGGSHPADLRTRAVREGKGEGAYYRIDGVKHFISNAKEAKFL 170

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303
                                                      E+ F      +   L  
Sbjct: 171 --------------------------------------GAHAFEVSFDGVRVPVANRLGA 192

Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
             TG    MK+L    LD A  ++     +LA+A  + R R + G  +  +  ++  +AD
Sbjct: 193 EGTGFKTAMKVLDNSRLDVAATALGIAEAALADATRWMRERQIGGEPIATKQGLQWMLAD 252

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           + L + A+  L+ +        +  + ++A A++ A        +M   V   A++  GG
Sbjct: 253 MKLRLEASWGLTLQALALRQAGQPFTLQSAMAKLHA-------SEMVGFVADAALQIHGG 305

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            GY     + R+ R++    I  GS       +  +L
Sbjct: 306 YGYTRAMPLERYVRDARILRIYEGSSEVQRNIIARML 342


>gi|146305634|ref|YP_001186099.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573835|gb|ABP83367.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp]
          Length = 403

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  D  Y ++G K +++S   +DA ++ A ++  
Sbjct: 127 GKTWAAMAITEPGCGSDSAAIRTTAVKDGDH-YVINGEKIYVTSGERADAVVVWASLDRS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   + +    G+   RL+ K+G +++ T  + FS+        L  +   V+  
Sbjct: 186 LGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFSDCRVPAANLLGNAEIDVQKG 245

Query: 313 K--ILIYLDSAIMSVSGMRVSLAE-AIHYARR-------RHVSGGILIDQPVMKRAIADI 362
              ++   D+    V+GM V +A  A+   R        R      L+     +  +  +
Sbjct: 246 FAGVMETFDNTRPLVAGMAVGVARAALERTRELLSKAGCRFDYARPLLSVTHAEATLYRL 305

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  AA  L+ + A   D     S+E       A I K    ++A  V  + +E  G  
Sbjct: 306 EAEWEAARLLTLKAAWMADNKLPNSKE-------ASIAKAKAGRVASEVTLKCVELAGAL 358

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+    +L V   L
Sbjct: 359 GYGEDELLEKWARDSKILDIFEGTQQIQLLIVARRL 394


>gi|294628906|ref|ZP_06707466.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292832239|gb|EFF90588.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 383

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 129/362 (35%), Gaps = 27/362 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
               R+    G+        F                            S  +   +   
Sbjct: 40  RDFYRKLGKLGIFGFGVPEEFGGSGAASFKFNAVIAEECARAGVTFGGASAHLALPATFV 99

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
             TT    + W P   +               +   + +TE   G+D+A I S  +  SD
Sbjct: 100 KYTTEEQRRRWLPGFVTG-------------DLMTAIAITEPEAGSDVAGIRSAARLASD 146

Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           G  Y L+G K ++S    +D  +++ +   +       +  L  D +  G+        +
Sbjct: 147 GTHYVLNGVKAYVSGGAQADLVLVVCRTSADETDRRGGMSLLAVDTAAPGVSIHSEPTTL 206

Query: 280 GNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G RS+  V + F++    +   +G    +   + D+     L  A+ + +    ++   +
Sbjct: 207 GLRSSDIVHMTFTDVRVPVTDVMGRPGEAFDCLADIFPQERLGIAVGAYAHAAAAVRLTV 266

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            + R R   G  +      K  IAD    ++A  A+  +   +FD     +EEAA     
Sbjct: 267 EHVRTRTAFGKPVAAFQNTKFVIADCHATVSALRAVVDQALEAFDAGGLTAEEAA----- 321

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              TK +C + A  ++ + ++  GG G+  +  IAR Y ++ A+ I  G+   M   V  
Sbjct: 322 --ATKLYCTETASGILDKCLQLHGGLGFTMDHPIARLYADNRASRIFGGTSEIMRTIVAK 379

Query: 457 LL 458
            +
Sbjct: 380 SI 381


>gi|260555135|ref|ZP_05827356.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
 gi|260411677|gb|EEX04974.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606]
          Length = 401

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNAEVDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|170781079|ref|YP_001709411.1| putative acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155647|emb|CAQ00765.1| putative acyl-CoA dehydrogenase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 392

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 127/398 (31%), Gaps = 31/398 (7%)

Query: 64  YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123
            +     + LA +  Y   ++  +   G  W + EF      ++      GL    +  +
Sbjct: 16  RLGEREKESLADLRAYLEAEVKPH-VNGL-WARAEFP---RHVVGGLAERGLFGMPFPET 70

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                        A  L  +    A  +   S      VA+  +P    +W P+  S E 
Sbjct: 71  RPFENSAVYRGWAALELGRVDASIATLVGMQSGLVMGSVAVAGSPEQRAEWLPRFASGE- 129

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDA 242
                       +    GLTE   G+D A  + +   +  D        +W  +  +SD 
Sbjct: 130 ------------ILGSFGLTEPLSGSDSARGLRTIATRRGDEWSITGSKRWIGNGTVSDV 177

Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
            ++ A+             L      G    R+++K   R     ++E           L
Sbjct: 178 TVIWAKDADDGQVKG---FLVPNDSPGFRATRIEDKQALRIVQNADIELDGVIVPDANRL 234

Query: 303 NVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360
              T   +   +L     + A  ++     +   A+ Y   R   G  L    +++  + 
Sbjct: 235 QNGTSFADTAAVLRLTRAEVAWAAIGISIGAYEAAVAYTGERVQFGKPLGAHQLIQDLLV 294

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
               +I A+  L  R +   DE     E +A A       K +        +A   E  G
Sbjct: 295 RSLGNITASIGLVTRASEMVDEGTQSDEHSALA-------KAYATSRMRETVAWCREAFG 347

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G+G + +  +AR + ++ A     G+     L V   +
Sbjct: 348 GNGIVLDYDVARFFADAEAIYSYEGTREMNTLIVGRAI 385


>gi|317507084|ref|ZP_07964846.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254627|gb|EFV13935.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 406

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 25/278 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
            +    + +TE   G+D AAI +      D  Y ++G K F ++   +   ++ A V+  
Sbjct: 130 GNKWAAMAITEPGCGSDSAAIKTTAIPDGDE-YVINGEKIFATAASRASHIVVWATVDKS 188

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
           +G   +   +      G+   R+++K+G +++ T  L F N            ++NV  G
Sbjct: 189 LGRAAIKSFVVPRDTPGVNLIRVEHKLGIKASDTCALIFDNVRVPKSNLLGSPEVNVEKG 248

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI-DQPV-MKRAIA--- 360
               M+         A MS+   R +L + +        +G  +  D+P  ++ A A   
Sbjct: 249 FAGVMQTFDNTRPVVASMSIGVARGALEDLLEILNE---AGIEISYDKPAHVQHAAAAEY 305

Query: 361 -DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  AA  L+ + A   D     S EA+ A+  A        +M   V   A+E  
Sbjct: 306 LRLEADYEAAYLLTLKAAWMADNKIPNSREASMAKAKAG-------RMGSDVTLRAIELA 358

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G  GY +   + ++ R++    I  G+     L V   
Sbjct: 359 GLYGYSQRTLLEKYGRDTKIFDIYEGTQQIQQLIVARR 396


>gi|74199785|dbj|BAE20728.1| unnamed protein product [Mus musculus]
          Length = 340

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 92/271 (33%), Gaps = 28/271 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVEAQYGGT--EASFFCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     +      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTIINNLFRKHASEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAM 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W   +  ++ F++ A V+   G   +   L D    G    +
Sbjct: 189 KTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGK 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N         N+        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPET---NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAI 359
           +        Y + R   G  + D  V    +
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQVYIIKL 336


>gi|239916859|ref|YP_002956417.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
 gi|239838066|gb|ACS29863.1| acyl-CoA dehydrogenase [Micrococcus luteus NCTC 2665]
          Length = 404

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 121/369 (32%), Gaps = 28/369 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E WD+ E+      L+ R     L          P V + A  +    L  +    A   
Sbjct: 55  EAWDRHEYP---LDLVARLGQADLLRDGVPVDGLPDVSRVAAGLAMMELSRLDGSIATMT 111

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 +   + L  +     +  P              M +  +     LTE   G+D 
Sbjct: 112 GVQGGLAMRSIQLCGSEEQRAEHLP-------------AMARGELYGAFALTEPTHGSDS 158

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ ++ +++  G       KW  +       ++ A+             +      G  
Sbjct: 159 VSLETRAERVDGGWRLHGHKKWIGNGAAGGVTVVWARSAEDEKVRG---FIVRQESEGYT 215

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            + +K K+  R+     +     F      L  +    +  ++L    +  A  ++    
Sbjct: 216 AEVIKGKVALRAIDQAHITLDGVFVPDADVLPEARSFKDTSRVLFATRVGVAWSALGKAV 275

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+HYA +R   G  L     ++  +A++   +     L  R     DE +     
Sbjct: 276 GCYEAAVHYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQLLVLRATRLEDEGR----- 330

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 MA + KY   + A ++ A A + +GG+G + +  +ARH+ +  A     G+   
Sbjct: 331 --LTGPMASLAKYSATRAARSIAANARDLLGGNGILIQNEVARHFADIEAIHTYEGTETV 388

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 389 QGLIIGREI 397


>gi|330501586|ref|YP_004378455.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915872|gb|AEB56703.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 403

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 112/276 (40%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   +  D  Y ++G K +++S   +D  ++ A ++  
Sbjct: 127 GKTWAAMAITEPGCGSDSAAIRTTAVQDGDH-YVINGEKIYVTSGERADTVVVWASLDRS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   + +    G+   RL+ K+G +++ T  + FS+        L  +   V+  
Sbjct: 186 LGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFSDCRVPAANLLGNAEIDVQKG 245

Query: 313 K--ILIYLDSAIMSVSGMRVSLAE-AIHYARR-------RHVSGGILIDQPVMKRAIADI 362
              ++   D+    V+GM V +A  A+   R        R      L+     +  +  +
Sbjct: 246 FAGVMETFDNTRPLVAGMAVGVARAALERTRELLSKAGCRFDYAKPLLSVSHAEATLYRL 305

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  AA  L+ + A   D     S+E       A I K    ++A  V  + +E  G  
Sbjct: 306 EAEWEAARLLTLKAAWMADNKLPNSKE-------ASIAKAKAGRVASEVTLKCVELAGAL 358

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+    +L +   L
Sbjct: 359 GYGEDELLEKWARDSKILDIFEGTQQIQLLIIARRL 394


>gi|225681345|gb|EEH19629.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccidioides
           brasiliensis Pb03]
          Length = 434

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 109/339 (32%), Gaps = 21/339 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
               L  + W     P     +    +    +M  +          +S  M      P V
Sbjct: 87  FQAALAKNGWLGICMPTEYGGSQLGISEAAVMMQTISESGAGMSGASSVHMNIFGLEPVV 146

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 K  + E       P+ +       G+TE   G D   + S   +  D       
Sbjct: 147 ------KFGNEEQKERFLIPLIQGRERACFGVTEPNTGLDTLRLRSTATREGDHYILKGS 200

Query: 231 HKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             W  ++  ++  ++L +             +     D   + +    +  K+G  S  T
Sbjct: 201 KIWTSTAQNAEKILILVRTTPLDKVTKPSQGLSLFYTDLDRSQVDVTEIP-KMGRASVDT 259

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L F N       L+G+ N     +        +  A  ++     +L  A  YA  R 
Sbjct: 260 NSLFFENWKVPATDLIGEENNGFKMIMHGMNAERILLAAEALGLGFAALRRAAIYANERQ 319

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  +     ++  +AD  + + A+  + ++ A  +D   +  E A  A+ +A    + 
Sbjct: 320 VFGRSIGQNQAIQHPLADAWMGLEASRLMVYQAAKMYDAGYTPGEYANAAKYLAAEASFK 379

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            C+ A       +   GG GY  E  + R+ RE     +
Sbjct: 380 ACERA-------VMTHGGMGYAREYHVERYLRECFIPRL 411


>gi|224139128|ref|XP_002322987.1| predicted protein [Populus trichocarpa]
 gi|222867617|gb|EEF04748.1| predicted protein [Populus trichocarpa]
          Length = 437

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 106/314 (33%), Gaps = 29/314 (9%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  S  +   +AL  +    + + P +              K S      LTE   G
Sbjct: 132 TFILVHSSLAMLTIALCGSEEQKQKYLPSL-------------AKFSTVACWALTEPDYG 178

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGS 266
           +D +++ +   K+  G       +W  +S  +D  ++ A+     ++  ++V        
Sbjct: 179 SDASSLQTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTTTDQINGYIV-----KKD 233

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMS 324
             GL   +++NKIG R     ++     F      L       +  K+L    +  A   
Sbjct: 234 APGLTVTKIENKIGLRIVQNGDIVMKRVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQP 293

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +            Y + R   G  L    + ++ +  +  ++ A   + +RL   +++  
Sbjct: 294 IGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVHMLGNVQAMVLVGWRLCKLYEKG- 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
                       A + K W    A    A   E +GG+G + +  +A+   +        
Sbjct: 353 ------TMTPGHASLAKSWISLKARETAAIGRELLGGNGILSDFLVAKAMGDLEPIYTYE 406

Query: 445 GSGNAMVLDVLNLL 458
           G+ +   L     +
Sbjct: 407 GTYDINSLVTGREI 420


>gi|171321541|ref|ZP_02910478.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171093176|gb|EDT38387.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 388

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 117/367 (31%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    P+           G      D +               R     
Sbjct: 22  RFGDDYWLERDRAGGFPS--DFHAALAEAGWLGIAMDPAHGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +++Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLSTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDAIAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N       L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVPRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFHACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|170703599|ref|ZP_02894344.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170131490|gb|EDT00073.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 388

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 117/367 (31%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    P+           G      D +               R     
Sbjct: 22  RFGDDYWLERDRAGGFPS--DFHAALAEAGWLGIAMDPAHGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +++Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLSTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDAVAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N       L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVPRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFHACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|262376572|ref|ZP_06069801.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308711|gb|EEY89845.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 399

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 105/282 (37%), Gaps = 36/282 (12%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253
                + +TE   G+D AAI +   K  D  Y L+G K F++S   +DA ++ A ++ ++
Sbjct: 125 ETWAAMAITESGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADAVVVWATLDKKL 183

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTGP 308
           G   +   +      G+  +RL++K+G +S+ T  + F N        L      V+ G 
Sbjct: 184 GRSAIKSFVVTKGTPGMKVERLEHKLGIKSSDTAMISFINCRVPAANLLGHAEIDVAKGF 243

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------------M 355
                ++   D+    V+ M +  A+A   +  R      +    +             +
Sbjct: 244 A---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDSTYATPYLQSSNI 294

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
              I  +  +  AA  L  + A   D  K  S         A I K    ++   +  + 
Sbjct: 295 AAQIYRMEAEWEAARLLMLKAAWMADNHKPNS-------CEASIAKAKAGRIGNEITLKC 347

Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +E     GY E   + +  R+S    I  G+     L +   
Sbjct: 348 VELAAAIGYNETELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|116669926|ref|YP_830859.1| acyl-CoA dehydrogenase domain-containing protein [Arthrobacter sp.
           FB24]
 gi|116610035|gb|ABK02759.1| acyl-CoA dehydrogenase domain protein [Arthrobacter sp. FB24]
          Length = 396

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 118/330 (35%), Gaps = 27/330 (8%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A  + A      A +     +   + + S+ AL  +    + W P I+S           
Sbjct: 84  AGILHAEATRADASIATFLGVHDGLFTGSIEAL-ASQEQQEAWLPDIYS----------- 131

Query: 192 QKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
                    GLTE  GG+D+A    +  ++  D        +W  ++  SD  ++ A+ E
Sbjct: 132 --LKRIGAFGLTEPLGGSDVAGGTRTTARRKGDSWILNGAKRWIGNATFSDWVVIYARDE 189

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                      L D    G    +++NKI  R+    ++   N        L  +    +
Sbjct: 190 ADNQVKG---FLVDTKTEGYSATKIENKISLRTVQNADITLDNVVVPDFFKLANANSFRD 246

Query: 311 DMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
             K+L    L  A  +V     +   A  YA  R   G  +    +++  +  I  +  +
Sbjct: 247 TNKVLKVTRLAVAWQAVGQQLAAFDVARRYAVERSQFGRPIASFQLVQNQLVQILGNAVS 306

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           +  +  RL+   D  +++ E++A A       K +        +A     +GG+G + + 
Sbjct: 307 SMGMMVRLSQLEDAGEAKDEQSALA-------KAFTTARMRESVAIGRSLLGGNGIVTDF 359

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +A+ + ++ A     G+     L     +
Sbjct: 360 EMAKIFSDAEAIYSYEGTHEINTLVTGRAI 389


>gi|116787122|gb|ABK24383.1| unknown [Picea sitchensis]
          Length = 429

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 111/322 (34%), Gaps = 28/322 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             LM  +  +   +++  +      + P +              +        LTE   G
Sbjct: 122 TFLMVHTCLAMLTISMCGSEDQKTKYLPSL-------------AQLHTISCWALTEPNYG 168

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +++ +   K+  G       +W  +S  +D  ++ A+    +    +   +      
Sbjct: 169 SDASSLNTIATKVEGGWKLDGQKRWIGNSTFADILVVFAR---NITTNQINGFIVRKGTP 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           GL   +++NKIG R     ++     F      L       +  K+L    +  +   + 
Sbjct: 226 GLRVTKIENKIGLRCVQNGDILLKGVFVADEDRLPGIDSFQDTSKVLAVSRIMVSWQPIG 285

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                      Y + R   G  L    + +  +  +  +I A   + +RL   +D+ K  
Sbjct: 286 IAMGVYDMCHRYLQERKQFGVSLNSFQISQEKLIRMLGNIQAMNLMGWRLCKLYDDGK-- 343

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLG 445
                     A +TK W    A  V++   E +GG+G + +  +A+ + +  P  S   G
Sbjct: 344 -----MTPGHASLTKAWNTLKAREVVSLGRELLGGNGILTDFLVAKAFCDLEPIYS-YEG 397

Query: 446 SGNAMVLDVLNLLEKGTNLFEQ 467
           +     L     +  GT  F+ 
Sbjct: 398 TYEVNSLVTGREVT-GTASFKA 418


>gi|126641687|ref|YP_001084671.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC
           17978]
          Length = 358

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 83  KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 141

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 142 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 201

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 202 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 252

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 253 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 305

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 306 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 348


>gi|302834786|ref|XP_002948955.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
           nagariensis]
 gi|300265700|gb|EFJ49890.1| hypothetical protein VOLCADRAFT_58804 [Volvox carteri f.
           nagariensis]
          Length = 425

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 125/367 (34%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF    H L+      GL          P +   ++ +    +  +    +  L+ 
Sbjct: 51  WERAEFP---HPLVPGFAALGLAGGAIKGYGCPGLSILSNAMAVVEIARVDASMSTFLLV 107

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   + L+ +    ++  P+             M K  +     LTE   G+D +A
Sbjct: 108 HSYLAMLTIGLLGSEEQKQELLPR-------------MAKFELVGCWALTEPSNGSDASA 154

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           +T+   K+  G       +W  +   +D  ++ A+         V   +      GL   
Sbjct: 155 LTATATKVPGGWMINGYKRWIGNGTWADVTVVWAR---NNQDGQVNAFIVRKGNPGLRTA 211

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKI  R     ++ FS  F      L   T   +  K+L    +  A   V      
Sbjct: 212 KIENKIALRCVQNADMTFSQCFVPDSARLPEVTSFADTNKVLAISRIMVAWQPVGLSVGV 271

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y   R      L    +++  +A +   I       +RL+  ++E +       
Sbjct: 272 YDMCCRYVTERKQFNTQLGSFQLVQEKLARMGGHIQGMWLACWRLSKLYEEGR------- 324

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            +   A + K W       V+A   E +GG+G +    +A+ + +  A     G+    V
Sbjct: 325 MSHEQASLVKAWTSARGREVMALGRELLGGNGILGHFLVAKSFSDLEAIYTYEGTYEVNV 384

Query: 452 LDVLNLL 458
           L     +
Sbjct: 385 LVAGRRI 391


>gi|114761381|ref|ZP_01441296.1| probable acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114545629|gb|EAU48631.1| probable acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 395

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 113/355 (31%), Gaps = 26/355 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           +K   H   H         G         +            AA L       AG +   
Sbjct: 37  EKENKHEFPHEFHAAMAEAGWLGITMPEEYGGANLG---VTDAALLMQTIGNSAGAI--- 90

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S  S   + L            K  ++E       P+   +     G+TE   G D   I
Sbjct: 91  SACSTIHINLFG-----PHAMVKHGTKEQKDRMIPPLVDGTSKACFGVTEPDAGLDTTHI 145

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGL 270
           +++  K            W  ++  +D  ++L +             +     D   + +
Sbjct: 146 STRAVKQGANYIVHGQKVWTSTAQNADKILLLTRTTPIEDCNKPTDGMTLFYTDVDRDKI 205

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
               + +K+G  +  +  +            +G+       + D      +  A  ++  
Sbjct: 206 AITPI-DKMGRNAVNSNAIFIDGLVIPEEDRIGEEGKGFKLLLDSLNPERILVAAEAIGV 264

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R +L +A  YA  R V G  +     ++  +A   + + AA  + ++ A  +D  +   
Sbjct: 265 GRRALQKAAEYANERVVFGRPIGKNQSIQHPLAQSWMALEAADLMVWQAARLYDAGEPCG 324

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            EA  A+ +A    +  C  A       +   GG GY +E  + R++RE     I
Sbjct: 325 AEANAAKFLAADAAFEACDRA-------VRTHGGFGYAKEYHVERYFREIVLPRI 372


>gi|16126567|ref|NP_421131.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221235349|ref|YP_002517786.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13423853|gb|AAK24299.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220964522|gb|ACL95878.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 387

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 128/365 (35%), Gaps = 36/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
                R D+    P   A +      G        +     +   +A  +  +     A 
Sbjct: 26  DEYWRRTDETGEFPE--AFVAAIAEGGWLGVAMPENVGGAGLGLTEAAVMMQSVAQSGAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +  ++     +    +        P+I S E               +   +TE 
Sbjct: 84  FSGASAIHLNIFGPMPLVKFGSDEQRNRLLPRIISGEDK-------------MCFAVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPR 260
             G D +++ ++ +K+  G Y L+G K + +    ++  +++A+   +         +  
Sbjct: 131 NSGLDTSSLETRAEKVEGG-YRLNGRKIWTTGAQRANKILIIARTTPKDQCAKPHQGLSL 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
              D         +   K+G ++     L   + F     L+G+       +        
Sbjct: 190 FYTDREN---IEAKPIPKMGRKAVECNMLFIEDLFVPAQDLVGEEGKGFQYLLHGLNPER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A+ ++   R +LA+A  YA  R V G  +     +   +A    ++ AA  L+F+ A
Sbjct: 247 VLFAVEAIGLGRAALAKATTYANERIVFGRPIGQNQGVAHPLAKSWAELEAANLLAFKAA 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           + +D+ K    EA  A+ +     +  C+        ++   GG GY +E  + R++RE+
Sbjct: 307 SLYDQGKECGAEANAAKYLGAEAGFHACEA-------SVLAHGGMGYAKEYDVERYFREA 359

Query: 438 PANSI 442
               I
Sbjct: 360 MIARI 364


>gi|317405397|gb|EFV85712.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter
           xylosoxidans C54]
          Length = 401

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/407 (14%), Positives = 132/407 (32%), Gaps = 40/407 (9%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +  L   A+ELA+ A         + P     D+ E +P     +R+    G       R
Sbjct: 8   QAALRQRARELAQQA---------FKPTAAHTDQSEQYP--WENVRQLCDQGFMGMTIPR 56

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS-MVALMTTPRVHKDWAPKIFSR 181
            +          I        A    G +   +   A   +    T    +  A  + + 
Sbjct: 57  EYGGQGLGHQDTIIVVEEMAKACATMGRITVEANMGAIGAIMRYGTHEQKQRAAACVLAG 116

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241
           +                 + ++E + G+  + + ++  +  D         W     +S 
Sbjct: 117 D--------------KPAICISEPQAGSAASEMATRAVRHGDDYLINGEKYWITGGGVSR 162

Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             ++ A+V        +   +          GL   +    +G R      L F++    
Sbjct: 163 LHLIFARVIEDGVDQGIGAFIHIKDDPALQDGLAVTQRSYAMGVRGIPETYLRFTDLKVP 222

Query: 298 LLG------DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                     L      +        + +  +++   + +  EA+ Y ++RH  G  + +
Sbjct: 223 RSMLVVPPEGLKRGFAGLMQAYNAQRVGAGTVALGIAQGAFEEAVAYVKQRHQFGRPIAE 282

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
              ++  I+D+A+ +  A  +    ANS     +          +A   K    + A  V
Sbjct: 283 FQGLQWMISDMAIQLNCARHMLHAAANS----GTPETFGFPDISLAAQAKIVAAETAQRV 338

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +A++  G SGY  +  + RH R++   +I  G+   +   V + +
Sbjct: 339 TNDALQLHGSSGYGRDLPLERHVRDARMFTIAGGTAQILRTQVASSI 385


>gi|218780166|ref|YP_002431484.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761550|gb|ACL04016.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 364

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 135/354 (38%), Gaps = 33/354 (9%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                D+    P   + ++++   G   S     F     + +  + A  L  +A  +  
Sbjct: 28  NAHEMDEAGEIPV--SAVQKAWELGCSVSGVPEEFGGYGMEDSPILSALVLEELAYGDMA 85

Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           + ++ +  S   + +  M T    K + P   + +Y                + + E   
Sbjct: 86  YAVAVTAPSLFITPINDMGTEDQKKAFLPNACTDDYH------------VYTMAMCEPHF 133

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G D  ++ +  +K  +G Y L+G K F   +  ++  ++ A ++G    F+V     +  
Sbjct: 134 GADAVSLKTTAEKK-NGSYVLNGVKCFAPCASQAEKMLVSASLDGENNLFVV-----EKG 187

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             GL     +  +G  S  T  +   N        +    G   D ++L     A+ S++
Sbjct: 188 AAGLSVSEKEKNLGLYSLETNTVTLENCEVPADARIGGDKGVDYD-RVLARSRVAMASMA 246

Query: 327 GM--RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               R SL     YA  R   G  +  +  +   IA++A +  A   ++++ A+  +  K
Sbjct: 247 AGMCRCSLDIVKQYAVEREQFGEPIAHRQSIAFMIAEMAYETDAIRLMAWQAASRLEAGK 306

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           S   EA  A       K +  +MA  +    ++ +GG GYI E ++ R YR + 
Sbjct: 307 SAKREAYLA-------KLYAGEMAMKICDYGVQILGGHGYIREMNVERLYRNAR 353


>gi|163734067|ref|ZP_02141508.1| acyl-CoA dehydrogenase, C-terminal domain [Roseobacter litoralis
           Och 149]
 gi|161392603|gb|EDQ16931.1| acyl-CoA dehydrogenase, C-terminal domain [Roseobacter litoralis
           Och 149]
          Length = 390

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 95/275 (34%), Gaps = 21/275 (7%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           +  +   +  AP+        + +TE   G+    + +  ++  D         W     
Sbjct: 93  YGTDAQKSFCAPIVLAGDKPAICITEPDAGSAATEMRTTARRRGDTYVINGTKHWITGGG 152

Query: 239 MSDAFIMLAQV-EGRVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEF 291
           +S  +++ A+V +       +   +    P       G      +  +G       EL F
Sbjct: 153 VSKLYLIFARVLDEDGSDLGITGFIVHSDPSAGILPKGFTVVGREKTMGLCGMPEAELRF 212

Query: 292 SN-TFGFLLG-----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            N   G  +              + +      + + ++++     +L  A  Y   R   
Sbjct: 213 ENLVVGADMALIPPSGFKRGFAELMNAYNSQRVGAGMIAMGVAAGALEHAKRYLLERKQF 272

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYW 403
           G  L +   ++  +AD+   + AA  +    A      KSR  + +      MA   K +
Sbjct: 273 GRPLAEFQGLQWMVADMDTQLHAARLMLHEAA------KSRGPDGSQFPDMTMAARAKLF 326

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             +MA  V++++++  G  GY +   + R YR+  
Sbjct: 327 ASEMAIKVVSDSLQMFGARGYGDREPLERMYRDVR 361


>gi|306415525|gb|ADM86729.1| acylCoA dehydrogenase [Delftia acidovorans]
          Length = 562

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 143/388 (36%), Gaps = 46/388 (11%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQA-----HKIRAARLYLMAQLEAGHLMSPSVTSAS 160
           LL      G+       S+     + +            L   +   AG L++     A 
Sbjct: 194 LLGPLREMGVFGLSIPESYGGTAPEGSENALVMIAVTEALSEASLAAAGSLITRPEILAR 253

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + W P+I S                 +G+ +TE   G+D+A+++ +  +
Sbjct: 254 ALLAGGTEEQKRHWLPRIASG-------------DPLVGIAITEPDYGSDVASLSLKATR 300

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFLVPRLLEDG------------S 266
              G        W   +  +   +++A+ +     G   +  LL +             +
Sbjct: 301 CPGGWRLDGAKTWCTFAGKAGLLMVVARTDPDRAAGHKGLSLLLVEKPSHEGHDFAFGQT 360

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDM--KILIYLDS 320
             G    R    IG R   + +L F N F      + G+  +  G    M   +   + +
Sbjct: 361 GGGRLTGRAIPTIGYRGMHSFDLSFENFFVPDACVVGGEAGLGKGFYFTMAGMVGGRMQT 420

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +   MR +L  A+ YA  R V    L    + +   A +A  +AA   L++ + +  
Sbjct: 421 AARACGVMRAALKAAVRYAGDRKVFAAPLASYTLTQVKFARLAARLAACRHLTYAVGHML 480

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ + R E        A + K + C+ A  +  EA++  GG GY EE + +R++ ++   
Sbjct: 481 EDGRGRME--------ASLVKLFACRSAELISREALQIHGGMGYAEETAASRYFIDARVL 532

Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQL 468
           SI  G+   + L V+        L E L
Sbjct: 533 SIFEGAEETLALKVIARSLLEDALKETL 560


>gi|78066286|ref|YP_369055.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77967031|gb|ABB08411.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 388

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 117/357 (32%), Gaps = 32/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLM 152
           D+    PA           G      D +               R      A L     +
Sbjct: 32  DRAGGFPA--DFHAALAEAGWLGIAMDPAHGGAGLGMTEAALMMRTISASGAGLSGASAV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++   + V +  T      + P             P+          +TE   G D  
Sbjct: 90  HMNIFGLNPVQVFGTDAQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTT 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN 268
            +T+Q ++  D         W  ++ +++  +++A+             +     D   +
Sbjct: 137 HLTTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTSLDQVAKPTDGLSLFYTDLDRS 196

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +  + ++ K+G ++  +  L   N   + G L+G+       +        +  A  ++
Sbjct: 197 RVEVREIE-KMGRKAVDSNMLFIDNLRVSEGDLIGNEGDGFRYLLHGLNPERILIAAEAI 255

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              + +L  A  YA  R V G  +     ++  +A   + + AA  +  + A  +D  +S
Sbjct: 256 GLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMKAATRYDAGQS 315

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              EA  A+ +     +  C+ A A         GG GY +E  + R+ RE     +
Sbjct: 316 CGAEANAAKYLGAEAAFQACQTAVA-------THGGMGYAKEYHVERYLRECMIPRL 365


>gi|314921975|gb|EFS85806.1| acyl-CoA dehydrogenase protein [Propionibacterium acnes HL001PA1]
          Length = 199

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 13/202 (6%)

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
           +      G+ Y   ++K+G R + T E+ F NT       +      +     L  LD++
Sbjct: 1   MVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLS--VALGTLDNS 58

Query: 322 IMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +S++   V +A+     A  + ++R   G  L +   ++  +AD+A+ + AA AL++  
Sbjct: 59  RVSIAAQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAARALTYSA 118

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D +  ++++ +Y        K +    A AV  +A++ +GG GY ++ ++ R +R+
Sbjct: 119 A---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSAVERMFRD 172

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
           +    I  G+     + +   L
Sbjct: 173 AKVTQIYEGTNQIQRIVIARQL 194


>gi|70986740|ref|XP_748859.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293]
 gi|66846489|gb|EAL86821.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293]
 gi|159123370|gb|EDP48490.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 436

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 110/346 (31%), Gaps = 19/346 (5%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +  H  L    W     P     A    +    +M  +           +       T P
Sbjct: 75  KEFHAALAKDGWLGIALPEHLGGAGLGISEATMMMQTITQSGAGMAGAQAIHANVYATQP 134

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDGIY 226
                   K  ++E        +   +     G+TE   G +   + +   K    D   
Sbjct: 135 ------LAKFGTKEQLEETIPKIINGTWRTCFGVTEPNTGLETLKLKTTATKNASGDSYS 188

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLCYQRLKNKIG 280
                 W   + ++   I+LA+       +     +     D      GL  +++K K+G
Sbjct: 189 VTGQKIWITCAQVASKMILLARTTPIEEIKRSTHGLSMFCIDLDRDKPGLDMRKIK-KMG 247

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R+    E+ F N       L+G+ N     +           A  ++     +L  A  
Sbjct: 248 GRAVDANEVFFDNYQIPTNTLVGEENEGFKIILHGMNAERCLLAGEALGLGYAALERATQ 307

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIM 396
           YA  R V G  +     +   +AD  + + AA  +++  A  +D +++ S        + 
Sbjct: 308 YANDRVVFGRPIGQNQGIAHPLADAYMKLEAAKLMTYHAARLYDASRTDSSIPFHSVGVA 367

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               KY   + A      A+   GG GY  E  + R+ RE     I
Sbjct: 368 CNSAKYLAAEAAFTACERAVLTHGGMGYAMEYDVERYLRECLVPRI 413


>gi|294146835|ref|YP_003559501.1| putative acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292677252|dbj|BAI98769.1| putative acyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 430

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/441 (16%), Positives = 135/441 (30%), Gaps = 44/441 (9%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
            +     L A +A   + +  E++ L          +  R  ++          GG    
Sbjct: 8   YFGDSPELSAYLAKMDAFIDAEIKPL------EQRDDNIRFFDHRREWARTDFEGG---- 57

Query: 96  KVEFHPAWHALLRRSI----HDGLHCSIWDRSFEPVVRKQAHKIR------AARLYLMAQ 145
                P W ALLR++       G       R+F                  A  L L   
Sbjct: 58  -GLPRPEWEALLRQARDLADRAGYLRFGLPRAFGGQDGSNLWMAAIREHLAARGLGLHND 116

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L+  H +  +     M+    T    + +                M    +++   LTE 
Sbjct: 117 LQNEHSIVANFPQVLMLQEFGTQEQKEKFI-------------GGMLDGDLSLAFALTEP 163

Query: 206 RGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVG-CFLVPR 260
             G+D   + ++  +        + + G K + +   S + ++  A+  G  G    +  
Sbjct: 164 EHGSDATHMQTRAVRESRNGASGWRIDGEKMWTTGMHSASHVIIFARTHGERGDGKGITG 223

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
            L      GL  +       N       +  +N +     L G+        +       
Sbjct: 224 FLVPSDTPGLKIEEWLWTF-NMPTDHPRISLTNVWVRDEDLFGEPGDGLALAQTFVHENR 282

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  S+      + E++ YAR R   G  L     ++  + +++        L  + A
Sbjct: 283 IRQAAASLGAASYCIEESVRYARERKPFGKPLATNQAIQWPLVEMSTQAEMLRLLIRKTA 342

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
           +  D   SR+E  A       +  YW  ++       AM+  GG GY   +     YR  
Sbjct: 343 SDMDR-MSRAEVTATLSHKVSMCNYWANRLCCEAADRAMQVHGGIGYSRHKPFEHIYRHH 401

Query: 438 PANSILLGSGNAMVLDVLNLL 458
               I  GS    +  +   +
Sbjct: 402 RRYRITEGSEEIQMRKIAAYM 422


>gi|322508305|gb|ADX03759.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2]
          Length = 391

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 116 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 174

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 175 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 234

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 235 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLQTSN 285

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 286 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 338

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 339 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 381


>gi|55380292|ref|YP_138141.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
 gi|55233017|gb|AAV48435.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049]
          Length = 388

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 106/349 (30%), Gaps = 31/349 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM---AQLEAGHLMSPSVTSAS 160
                     G H  +    +E                           +L+  +  +A 
Sbjct: 39  QEFWDELAAAGFHGLLVPPEYEGAGMGIQEMGLVMETLCAEGCGMAGTWYLVLTAGMAAV 98

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            ++   T    + + P I                     +G+TE   GT+   + ++ +K
Sbjct: 99  GISENGTEAQKQTYLPDI-------------ANGKRNFSIGITEPEAGTNTLNVATRAEK 145

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLK 276
             D         W   +  +D  I++ +   R     G   +   + D     +    + 
Sbjct: 146 DGDEYVLNGNKAWITFADRADNMILVTRTTPRDEVERGTDGISLFIVDMDDPNIDVSPIP 205

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
            K G   + + E+   +       LLG+ +     + DM     +  A       +++  
Sbjct: 206 -KHGINYSKSCEVFIEDVRVPEENLLGEEDDGWWTLVDMLNPERIGFAAAGTGIGKLAAD 264

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            AI YA  R V    +     +   I      +  A  +  + +  +D+ +    E   A
Sbjct: 265 TAIEYASDREVFDAPIGSHQAVSFPITKAYARMETAALMREKASWLYDQGEECGYETNVA 324

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +  A              + ++M+  GG GY +E  + R +RE     +
Sbjct: 325 KATAVSA-------GIEAVKQSMQAFGGWGYAKEYDVERWWREINLTRL 366


>gi|326405049|ref|YP_004285131.1| hypothetical protein ACMV_29020 [Acidiphilium multivorum AIU301]
 gi|325051911|dbj|BAJ82249.1| hypothetical protein ACMV_29020 [Acidiphilium multivorum AIU301]
          Length = 399

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 134/392 (34%), Gaps = 43/392 (10%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+   +    E+AR+           G      D+   +P   A +R     G   ++  
Sbjct: 17  GDDPHAAIRAEVARLCAGFP------GAYWRELDREGTYPE--AFVRALAEGGWLAALIP 68

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +       +           A    G      +     +    +      + P+I   
Sbjct: 69  EEYGGSGLGLSAAAAILEEVQHAGCN-GAACHAQMYIMGALLRHGSEAQKARYLPQIARG 127

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMS 240
           E                  G+TE   GTD  A+ +  ++  D  Y ++G K + S +  S
Sbjct: 128 ELR------------LQAFGVTEPTSGTDTTALRTTARREGDH-YVVNGQKIWTSRAEYS 174

Query: 241 DAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           D  ++LA+   R        G  +    + +    GL  + ++  + N +  T E+ F N
Sbjct: 175 DLMLLLARTTPREQAQKRTDGLSVFLLDMREARQAGLTIRPIRTMM-NHA--TTEVFFDN 231

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  L+G+       +        +      +   +  + +A  YA+ R V G  + 
Sbjct: 232 VRVPAENLIGEEGRGFRYILSGMNAERILIGAECIGDAKWFIDKATAYAKERVVFGRPIG 291

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  IA     + AA  +  R A  F+  ++   EA  A+++A    +   ++   
Sbjct: 292 QNQGVQFPIAKAYARMRAAELMVHRAAALFEAGQNCGAEANMAKMLAAEASWEAAEV--- 348

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                ++  GG G+ EE  + R +RE+    +
Sbjct: 349 ----CVQTHGGFGFAEEYDVERKFRETRLYQV 376


>gi|222109444|ref|YP_002551708.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|221728888|gb|ACM31708.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 396

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/419 (16%), Positives = 146/419 (34%), Gaps = 53/419 (12%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            +  EL  L + V    A+++  +   N  +   +GP     D+         L+ R   
Sbjct: 4   SLSPELRALRDKVRQFIAEQVIPL--ENDERQSHHGPSEALRDE---------LVARGKA 52

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            GL      R+   +      K        Y      A ++ +P   +  ++  + TP  
Sbjct: 53  AGLLTPHASRAMGGMGLTHVEKAVVFEEAGYSWLGPTALNIHAPDEGNIHLMEEVATPAQ 112

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCL 228
            + W     + ++                  +TE     G D + + +   +  D  Y +
Sbjct: 113 KERWLRGQVAGDWR-------------SCFAMTEPAPGAGADPSMLDTTAVRDGDD-YVI 158

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-----GNR 282
           +G KWF++      + I++A++E           L D    G+  +R  + +     G  
Sbjct: 159 NGRKWFITGAEGAHYAIVMARMEDGSA----TMFLTDMGRPGIVLERNMDAMDSCFTGGH 214

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 L F N       +LG++       +       L   +  +   R +   A+ YA
Sbjct: 215 G----VLRFDNLRVPASDVLGEIGKGFRYAQVRLAPARLTHCMRWLGQARRAHDTALEYA 270

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R+R   G  L +   +   +AD  +D+  A    +  A   D+ +  + E++ A+++   
Sbjct: 271 RKRQAFGKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWLLDQGEKCNFESSRAKVVCSE 330

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            ++        V+  +++ +GG G   E  + R + +  A  I  G        +   L
Sbjct: 331 AEW-------RVVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEVHRWSMARKL 382


>gi|302537509|ref|ZP_07289851.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
 gi|302446404|gb|EFL18220.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C]
          Length = 374

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 107/329 (32%), Gaps = 31/329 (9%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                EA   ++     A  V    +    + W P + +  +                  
Sbjct: 70  AYGCTEAETALALQGLGAHPVLRSGSAAQRERWLPGVRAGRH-------------VAAFA 116

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D AA+    +    G        W  ++P +D + + A+     G   +   
Sbjct: 117 LSEPGAGSDAAALALTAEADGPGWRLTGSKCWISNAPEADFYTVFARTGEAPGAKGITAF 176

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI----- 316
           L      GL  + L+       +    L F        G  +V  GP +  ++ +     
Sbjct: 177 LVPADRPGLTGEALEM---LSPHPIGSLAFDGVPV---GREDVLGGPGQGFRVAMETLNL 230

Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                   +V   R +L   + +   R   GG+L D   +   +A++A    AA  L + 
Sbjct: 231 FRPSVGAFAVGMARAALDATVAHTAGRTAFGGVLADLQAVAHRVAEMATRTEAARLLVYA 290

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A ++D        AA     A + K    + A  V+  A++  G +       +   YR
Sbjct: 291 AAGAYDSG------AADVPGRAAMAKLLATETAQYVVDHAVQLHGAAALRRGHLLEHLYR 344

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           E  A  I  G+       +   L +G   
Sbjct: 345 EVRAPRIYEGASEVQRTIIAKELYRGVAA 373


>gi|115351620|ref|YP_773459.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115281608|gb|ABI87125.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 388

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 117/367 (31%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    P+           G      D +               R     
Sbjct: 22  RFGDDYWLERDRAGGFPS--DFHAALAEAGWLGIAMDPAHGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +++Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLSTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDAVAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N       L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVPRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFEACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|183981506|ref|YP_001849797.1| acyl-CoA dehydrogenase FadE12_3 [Mycobacterium marinum M]
 gi|183174832|gb|ACC39942.1| acyl-CoA dehydrogenase FadE12_3 [Mycobacterium marinum M]
          Length = 412

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/439 (15%), Positives = 130/439 (29%), Gaps = 48/439 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG---ER 93
           ++    L +L+A     +  E++ L         + +    +        +   G     
Sbjct: 3   FTLPEHLQSLLAQMDEFIEAEIKPL-------EHEHIQYFDHRREHARTDWDNDGVPRRE 55

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQL 146
           W+++        + RR+   G         F               H      L L   L
Sbjct: 56  WEELL-----AEMRRRADQAGWLRYGLPARFGGRDGTNLDMAVIREHLAHK-GLGLHNDL 109

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +    +  +     M+    T     +W   + + E              ++  GLTE  
Sbjct: 110 QNESSIVGNFPQVIMMDRFGTDAQKSEWTEALITGE-------------RSMAFGLTEPL 156

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLED 264
            G+D   + ++ +   D  + ++G K F +        ++ A+  G  G    +   L  
Sbjct: 157 HGSDATWMQTRAEHAGD-SWIINGAKRFNTGVHRATHDLVFARTSGEPGQARGITAFLVP 215

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               G         + N      E+E +N       +LG+++      +       +  A
Sbjct: 216 TDTAGFNVPYYWWTL-NMPTDHGEVELTNVRVPDDAVLGEVDRGLEVGQTFLHENRIRQA 274

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   +  +  A+ YA  R V G  L     ++  + ++  +      L +  A   D
Sbjct: 275 ASSLGAAQYCIDRAVGYAGERRVFGKPLSVNQAIQWPLVELQTEAQMVRLLVYYAAWHLD 334

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                            +  Y   ++       AM+  GG GY         YR      
Sbjct: 335 RNHHME-----VSDKVSMANYRANRLVCEAADRAMQVFGGVGYSRHEPFEHIYRHHRRYR 389

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+    +  V   L K
Sbjct: 390 ITEGAEEIQIRRVAQRLFK 408


>gi|224925930|gb|ACN69985.1| prolyl carrier protein dehydrogenase [Streptomyces antibioticus]
          Length = 377

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 123/367 (33%), Gaps = 31/367 (8%)

Query: 99  FHPA-WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--S 155
           F PA W    R     GL        F               L     LEA     P   
Sbjct: 33  FTPARWQDAARI----GLTGLCLPTEFGGGGLGA--------LDTALCLEAFGRGCPDTG 80

Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215
           +  A    L+      +D+A      E      + +    +     +TE   G+D++ + 
Sbjct: 81  LVFAVSAHLLACAVPIRDFADVSVRGE----LLSGLASGELVAANAMTEDDAGSDLSRLA 136

Query: 216 SQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
              ++  DG Y L+G K F  ++P +D  +     +   G   V   +      G+    
Sbjct: 137 VTAERKDDG-YLLNGEKSFASNAPAADVLVTYGTSDPAAGFLGVTAFVLRADLPGVQVGE 195

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVS 331
              K+G        + F +        L          +  +  + AI+    +  M   
Sbjct: 196 PFRKMGLSGCPAGRVAFRDCHVPTSHRLGTEGQGSIIFQHSMGWERAILFAGYLGLMERQ 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L + + +AR R   G  + +   +   +  +   + AA  L +R     D+ +  S   A
Sbjct: 256 LEQCVRHARERRQFGHGIGEFQAVSHRVVGMKQRLEAARLLLYRACWLMDQGRDHSTAVA 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                   +K    + A A   +A++  GGSGY+    I +  R++  ++I  G+ +   
Sbjct: 316 L-------SKTAVSEGAVANSLDAIQIFGGSGYLSPAGIEQQLRDAVPSTIFSGTTDIQR 368

Query: 452 LDVLNLL 458
             V   +
Sbjct: 369 EIVAREI 375


>gi|254386240|ref|ZP_05001550.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
 gi|194345095|gb|EDX26061.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1]
          Length = 384

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 100/326 (30%), Gaps = 25/326 (7%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                EA   ++     +  V    TP   + W P + S                     
Sbjct: 80  AYGCTEAETALALQGLGSYAVLREGTPAQSERWLPGVRSG-------------RTVAAFA 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           L+E   G+D AA+    ++   G        W  ++P +D + + A+     G   V   
Sbjct: 127 LSEPGAGSDAAALALDARRDGAGWRLTGDKCWISNAPEADFYTVFARTGEGPGAKGVTAF 186

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      GL      + +         L F         LLG+         D   L   
Sbjct: 187 LVPADRPGLS-GEPLDMLSPH--PIGSLAFDGVPVGPEDLLGEPGRGFRVAMDTLNLFRP 243

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                ++   R +L   + +   R   GG+L D   +   +A++A    AA  L +  A 
Sbjct: 244 SVGAFAIGMARAALDATLAHTAGRTAFGGVLGDLQAVAHRVAEMATRTEAARLLVYAAAG 303

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           ++D               A + K    + A  V+  A++  G         +   YRE  
Sbjct: 304 AYDSGSRD------VPRRAAMAKLLATETAQYVVDHAVQLHGAVALRRGHLLEHLYREVR 357

Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464
           A  I  G+       +   L +G   
Sbjct: 358 APRIYEGASEVQRTIIAKELYRGVAA 383


>gi|284043051|ref|YP_003393391.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
 gi|283947272|gb|ADB50016.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM
           14684]
          Length = 387

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 129/375 (34%), Gaps = 37/375 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLE 147
           P    W+     P   A+L      G     + R            + A  L    +   
Sbjct: 43  PHAGEWEAARSFPD--AVLADCARRGYVGLKFPREHGGSGDPVGAAVFAEELARCGSGGL 100

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
              + + +  +   V    T   H+ +               P  +      LG+TE   
Sbjct: 101 GAGIGAHAGIALPPVWKFGTADQHERYL-------------RPGIRGEKIAALGITEPDA 147

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLVPRLLEDGS 266
           G+D+AA+ ++ +++ DG + ++G K F+++ +   F++ A +     G   +  L+ D  
Sbjct: 148 GSDVAALRTRAERV-DGGFLVNGSKMFITNGVRADFVVTAVRTTPEGGHGGISFLVVDRG 206

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL---IYLDSAIM 323
             G+  + ++ K+G  ++ T  + F + F      L    G  + + +      L  ++ 
Sbjct: 207 -EGVEARPIE-KLGWHASDTALIAFDDVFVPERNLLGELHGGFKLIMVNFAWERLMMSLG 264

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++  M + L   +  AR R            ++  +A++A  +    AL++         
Sbjct: 265 ALGAMELVLERTVALARSRRAG-------QSIRHRLAEVATALETGRALTYHALRLHLAG 317

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
               +    A++          + A       ++     G   E +I R  R+     I 
Sbjct: 318 GDAVQAVTMAKLATQ-------RAAYDAADSCLQIHFDLGEHAELAIERAVRDLRLGPIG 370

Query: 444 LGSGNAMVLDVLNLL 458
            G+   M   +   +
Sbjct: 371 GGTDEVMREILAKTM 385


>gi|260906632|ref|ZP_05914954.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium
           linens BL2]
          Length = 389

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 117/357 (32%), Gaps = 30/357 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLM 152
           DK   H             G         +        +A  +  +       + A   +
Sbjct: 31  DKDANHEFPTEFYNLLAEKGWLGLTTPTEYGGHGLGITEATLLLESVAAAGGAMNAASSI 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++     V    +  + +   P+I              +  V +  G+TE   G D  
Sbjct: 91  HMTIFGLHPVIKHGSEELKRANLPQI-------------AEGKVHVCFGVTEPDAGLDTT 137

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPN 268
            +T+  +K  D         W   +  SD  ++LA+     +       +     D   +
Sbjct: 138 RVTTFAKKRGDEYVVSGRKVWISKAMESDKILLLARTTKREDAEKPTDGMTLFFTDLDRD 197

Query: 269 GLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
            +    +  KIG  + ++ EL   +        +G+       + D      +  A  ++
Sbjct: 198 HVQINPI-RKIGRNAVSSNELVIEDLVIPESHRVGEEGKGFKYLLDGLNPERMLIAAEAL 256

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R +LA+A+ YA  R V    +     ++  +AD    + AA     +   ++D+  S
Sbjct: 257 GIGRAALAKAVKYANERVVFDRPIGMNQGLQFPLADSLAKLDAAELALRKATWTYDQGLS 316

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              EA  A+ +       C +        A++  GG GY EE  + R+ RE     I
Sbjct: 317 SGREANTAKYL-------CAEAGVDAADRAVQVHGGMGYSEEYHVGRYLREVRLMKI 366


>gi|148685768|gb|EDL17715.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_c
           [Mus musculus]
          Length = 333

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 90/266 (33%), Gaps = 28/266 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     GL     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGLMGIEVEAQYGGT--EASFFCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     +      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTIINNLFRKHASEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAM 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W   +  ++ F++ A V+   G   +   L D    G    +
Sbjct: 189 KTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGK 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N         N+        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPET---NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQPV 354
           +        Y + R   G  + D   
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQA 331


>gi|311108387|ref|YP_003981240.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310763076|gb|ADP18525.1| acyl-CoA dehydrogenase, middle domain protein 15 [Achromobacter
           xylosoxidans A8]
          Length = 407

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/393 (18%), Positives = 134/393 (34%), Gaps = 44/393 (11%)

Query: 86  AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145
           +Y       D+V        L RR+   GL      R        +           ++ 
Sbjct: 33  SYDEHENIRDEVL-----QPLRRRAREAGLWALQMPRERGGQGLSRVGMAACYEEMNVSI 87

Query: 146 LEAGHLMSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
                  S +    +M+ L    T      W               P+    V     +T
Sbjct: 88  FGPVVFNSAAPDDGNMMVLEKVATDAQKARWL-------------QPIVDGKVRSSFAMT 134

Query: 204 EKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260
           E     G+D + + +      DG + + G KWF++   ++  FI++A+         +  
Sbjct: 135 EPHPGSGSDPSMMLTSATLQ-DGKWRIHGKKWFITGAGVAQHFILMAKTSDDP-RKGLTA 192

Query: 261 LLEDGSPNGLCYQRLKNKIGN--RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IY 317
            L D    G   +R    +G         EL F    G  + D N   G  + +K+  I 
Sbjct: 193 FLFDADQPGWRIERRIPIMGPEEHGGH-CELVFD---GLEIPDENRLLGVGDGLKVTQIR 248

Query: 318 LDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L  A ++     +   R SLA A  Y   R   G  L ++  ++  + + A+ I     L
Sbjct: 249 LGPARLTHCMRWLGLARRSLAIARDYVATRQSFGTALAEREGVQWMLGECAMAIEIGRLL 308

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + R A + D+        +YAR    + K    +     +  A++  G  GY  + ++A 
Sbjct: 309 TMRAAVALDQG-------SYARKEVSMAKIVVSETLHKAVDTAIQLTGARGYSRDTALAW 361

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            YR +    ++ G+     + +   L    + F
Sbjct: 362 IYRYARQARLVDGASEVHKMVLARFLMDEGDEF 394


>gi|71985192|ref|NP_001022063.1| Acyl CoA DeHydrogenase family member (acdh-12) [Caenorhabditis
           elegans]
 gi|50727064|gb|AAT81203.1| Acyl coa dehydrogenase protein 12, isoform b, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 408

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 108/309 (34%), Gaps = 32/309 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      A+L +    G    +     E      +   R A +     L  G +M    +
Sbjct: 93  ETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQS 152

Query: 158 SAS-MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                + L  T    + + P + +                     LTE   G+D +++ +
Sbjct: 153 IGYKGILLEGTDAQKQKYLPDLATG-------------RKFAAFALTEPTTGSDASSVRT 199

Query: 217 QGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNG 269
           + +  +DG       G  W  +   +D F + AQ      +G     +    + + +  G
Sbjct: 200 RAELSADGKHYVLNGGKIWISNGGFADVFTVFAQTPVKQADGSTKDKM-SAFIVERAFGG 258

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV--- 325
           +     + K+G + + T E+ F N     +   N+     E  K+ +  L++    +   
Sbjct: 259 VTSGPQEKKMGIKGSNTTEVHFDN---LKIPVENLLGKEGEGFKVAMNILNNGRFGIPAA 315

Query: 326 --SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
               M+  + + + +   R   G  L +   ++  + ++   + A  ++ + L+++ D  
Sbjct: 316 CTGAMKHCIQKTVDHITTRVQFGKKLQEFGNIQEKLVEMISKLYATESIVYMLSSNMDRG 375

Query: 384 -KSRSEEAA 391
            K    EAA
Sbjct: 376 IKEYQLEAA 384


>gi|315441787|ref|YP_004074666.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315260090|gb|ADT96831.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 414

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 122/368 (33%), Gaps = 26/368 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    L +++   GL              + A         +    EA +  +P   +
Sbjct: 41  VPPVVEELKKQAKERGLWNLFLPSVSGLSNLEYAPLAELTGWSMEIAPEATNCAAPDTGN 100

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQ 217
              + L  T    K W   + + E                   +TE     +D   I + 
Sbjct: 101 METLHLFATEEQSKQWLEPLLAGEIR-------------SAFAMTEPAVASSDARNIETT 147

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQ 273
             +  D  Y ++G KW+++    P     I++ +             +L      G+  +
Sbjct: 148 MLRDGDD-YVINGRKWWITGAADPRCKILIVMGRTNPDGPSHRQQSMILVPTDTPGVSIE 206

Query: 274 RLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           R     G +      E+ F N       LL +        +       +   + ++    
Sbjct: 207 RSLPVFGWQDQHGHCEITFDNVRVPASNLLDEEGSGFAIAQARLGPGRIHHCMRAIGAAE 266

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +LA  +   + R   G  L +Q V++ AIA    DI     L  + A + D+  ++S++
Sbjct: 267 RALALMVDRVQTRIAFGKPLAEQGVVRDAIAKSRNDIEQTRMLCHKAAWTIDQHGNKSKD 326

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A     +    K    +MA  VI  A++  GG+G  ++  +AR Y    A  +  G    
Sbjct: 327 AQL---LVAQIKAVAPQMACDVIDRAIQVHGGAGVSDDFPLARLYSWHRAMRLFDGPDEV 383

Query: 450 MVLDVLNL 457
            +  +   
Sbjct: 384 HMRTIARA 391


>gi|120402890|ref|YP_952719.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955708|gb|ABM12713.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 412

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 123/432 (28%), Gaps = 38/432 (8%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++    L AL+A   + +  E++ L         + +    +        +  GG    +
Sbjct: 3   FNLPEHLPALLAEMDAFIEAEIKPL-------ERENIQYFDHRREHARTDWDNGG--VPR 53

Query: 97  VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLEAGH 150
            E+      + RR+   G         F                  A  L L   L+   
Sbjct: 54  REWEDLLDEMRRRADAAGWLRYGLPSQFGGRDGSNIDMAVIREHLAAKGLGLHNDLQDES 113

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +     M+    T    K+W   + +              + ++  GLTE   G+D
Sbjct: 114 SIVGNFPQVIMMDRFGTEEQKKEWTDALITG-------------ARSMAFGLTEPNHGSD 160

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNG 269
              + +    + D        +W      +   ++ A+  G  G    +   L      G
Sbjct: 161 ATWLETTAVAVGDDWIINGAKRWNTGVHRATHDLIFARTSGEPGQARGITAFLVPTDAPG 220

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                      N      E+   N       +LG+++      +       +  A  S+ 
Sbjct: 221 FSVPYYWWTF-NMPTDHGEVVLENVRVPAGAVLGEVDRGLEVGQTFLHENRIRQAASSLG 279

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             +  +  A+ YA  R V G  L     ++  + ++  +      L    A+  D     
Sbjct: 280 AAQYCIDRAVAYANDRKVFGKPLAVNQAVQWPLVELQTEAQMVRLLVRYAASELDRNHHM 339

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                       +  Y   ++       AM+  GG GY         YR      I  G+
Sbjct: 340 E-----VSDKVSMANYRANRLVCEAADRAMQVFGGVGYSRHEPFEHIYRHHRRYRITEGA 394

Query: 447 GNAMVLDVLNLL 458
               +  V   L
Sbjct: 395 EEIQIRRVAQRL 406


>gi|330835655|ref|YP_004410383.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
 gi|329567794|gb|AEB95899.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           cuprina Ar-4]
          Length = 361

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 104/274 (37%), Gaps = 27/274 (9%)

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251
            K        L+E   G+D  ++ ++ +K+S          W      +D F++ A+   
Sbjct: 100 AKGKKIGSFALSEPCCGSDTRSMKTRAEKVSGVWRVSGEKMWITQGMYADVFLVAAKTSE 159

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311
           ++G FLV         + +  ++++   GNR   T ++  +     L+G   V+      
Sbjct: 160 KIGTFLV------REQDCVEREKIEVS-GNRGTGTAKIRLNECEADLIGGWQVTKYA--- 209

Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
                 L    +++S + + LA     EA  +A  R   G  L++   ++   +D   D+
Sbjct: 210 ------LSIGRIAISAIAIGLALGATEEAYGWAEERTAFGKKLLEHEGVQWMFSDSIADL 263

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            +  +L      +F+           A  +    K    K+A  V+   ++ +GG GY +
Sbjct: 264 ESVKSLLDVTCKAFENNW------EMAEPLIAALKLVSSKIANNVVDRMVQIMGGMGYAK 317

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                R YR+     I  G+     L +   L +
Sbjct: 318 STRTERAYRDVRLTRIGEGTDEVQRLILSRHLRE 351


>gi|271965426|ref|YP_003339622.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270508601|gb|ACZ86879.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 396

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 115/361 (31%), Gaps = 28/361 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             L  ++  +GL                   +    +   +      L + ++  + M+ 
Sbjct: 43  RELQEQARKEGLWALGHPAELGGGGLPFLDYVYVNEVQGRSDFGQLALGTFTLQDSLMLH 102

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKIS 222
              +    + +   +   E  P                +TE     +D   + +      
Sbjct: 103 EYASDEQRERFLTPLVRAEIWP-------------SFAMTEPDVSSSDPTQLRTSAVLDG 149

Query: 223 DGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIG 280
            G + ++GHKWF +     A+  ++ + E      L    +L      G    R    +G
Sbjct: 150 -GEWVINGHKWFTTGADRAAYTTVMCRTEPDAPPHLAFSMILVPTDTPGYTIVRDTPVLG 208

Query: 281 NRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIH 337
                  E+ + +        L     G V   + L    +   +  +   + +      
Sbjct: 209 IDGGH-CEVRYEDVRVPASNLLGPRGQGFVIAQRRLGPGRIFHCMRWLGQAQRAFDLMCR 267

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
               R VSG  L  + +M+R + D   +I +A  L+   A++ D+          AR+  
Sbjct: 268 RLNERSVSGRPLAGKQLMRRHVFDSYTEIQSARLLTLNAAHAIDQGGQ-------ARVEI 320

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
              K    +M   VI  A++  G +G   +  + R YR + A  I  G     +  V   
Sbjct: 321 GAVKVAAARMLHNVIDRAIQVYGAAGLTADTPLERMYRRARAGRIYDGPDEVHIDSVGRR 380

Query: 458 L 458
           +
Sbjct: 381 I 381


>gi|163790014|ref|ZP_02184449.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
 gi|159874714|gb|EDP68783.1| GLUTARYL-COA DEHYDROGENASE [Carnobacterium sp. AT7]
          Length = 406

 Score =  175 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/422 (18%), Positives = 145/422 (34%), Gaps = 42/422 (9%)

Query: 45  ALIANFPSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
            L   +PS +++    L  GE  +    +E   +     P L  Y      W+K EF   
Sbjct: 12  DLATFYPSDLYEYSSALTDGELTVLKELREALEINLR--PVLSEY------WEKAEFP-- 61

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
                 +     +  +          RK +      R + +A+L+A      +V      
Sbjct: 62  -FEAFEKIGKVRMMDNPLLFEGRENTRKPSELYNVFRYFELAKLDASIATFYTVHGGLFY 120

Query: 163 A---LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQG 218
           A           + WA K  S E                   LTE   G+DIA  + +  
Sbjct: 121 ATLLQGGNEEQIERWADKTASYEIQG-------------CFALTEPEHGSDIAGGLATTA 167

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D        +W   +  +D   + A+ E       V   +  G   G+  Q+++ K
Sbjct: 168 RKEGDTWIINGEKRWIGGAGSADEMAVFARDEADGK---VKAFMVPGKAEGVHVQKIEGK 224

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           I  R      + F++        L       +   IL     D + ++      +   A+
Sbjct: 225 ISLRMTQNGHITFTDVKVGEDRRLQNVNSFKDVAGILRITRADISHLATGLTAGAFEAAL 284

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y ++R   G  L    +++  ++ +  ++ A  + S RLA   +E   R   ++ A++ 
Sbjct: 285 RYVKQREQFGKNLGSFQLVQEKLSIMQANVTANLSFSVRLAQMQEEGNYREVNSSMAKMH 344

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +            +A A E +GG+G   E  +AR + ++ A     G+     L V  
Sbjct: 345 NAL-------RMRETVALAREVVGGNGITLETDVARFFADAEAIYSYEGTHEINALIVGR 397

Query: 457 LL 458
            L
Sbjct: 398 YL 399


>gi|206560083|ref|YP_002230847.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198036124|emb|CAR52019.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 388

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 119/367 (32%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    PA           G      D ++              R     
Sbjct: 22  RFGDDYWLERDRAGGFPA--DFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P + +                     +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKTRFLPPLIAGHDK-------------ACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +++Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLSTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDQVAKPTDGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N   +   L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVSRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  ++   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQACGAEANAAKYLGAEAAFQACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|330822953|ref|YP_004386256.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308325|gb|AEB82740.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 400

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 140/389 (35%), Gaps = 45/389 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASM 161
             L+ R+   GL      R    +      K        Y      A ++ +P   +  +
Sbjct: 44  RELVARARAAGLLTPHASREMGGLGLSHVEKAVVFEEAGYSRLGPTALNIHAPDEGNIHL 103

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +  + TP   + W               P     +     +TE     G D + + +   
Sbjct: 104 MEEVATPAQKERWL-------------RPQVAGELRSCFAMTEPSPGAGADPSMLQATAV 150

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   G Y ++G KWF++    +D  I++A++E           L D    G+  +R  + 
Sbjct: 151 RDG-GDYVINGRKWFITGADGADYAIVMARMEDGSA----TMFLTDMDRPGIVLERNMDA 205

Query: 279 I-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +     G        L F N       +LG++       +       L   +  +   R 
Sbjct: 206 MDACFTGGHG----VLRFENLRVPAADVLGEIGKGFRYAQVRLAPARLTHCMRWLGQARR 261

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y R+RH  G  L++   +   +AD  +D+  A    +  A   D+ +  + E+
Sbjct: 262 AHDTALDYVRKRHAFGKPLVEHEGVGFMVADNDMDLHTARLHIWHTAWLLDQGEKCNFES 321

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+++    ++        V+  +++ +GG G   E  + R + +  A  I  G     
Sbjct: 322 SRAKVVCSEAEW-------RVVDRSVQMLGGQGVTGETPVMRIFTDMRAFRIYDGPSEVH 374

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
              +   L    +L E+  + L ++ G++
Sbjct: 375 RWSMARKL---AHLSEKAEAELLREGGAA 400


>gi|54024207|ref|YP_118449.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015715|dbj|BAD57085.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 399

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 129/359 (35%), Gaps = 35/359 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L  ++   G+        +  +      +A     A   L     A ++ +P   +  M
Sbjct: 48  RLQEQARRAGVFAPHAPVEYGGLGLSMSDRAPVFEEAGYSLFGP-TALNIAAPDEGNVHM 106

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +A +  P     +               P+ +  +     +TE     G+D AA+T++  
Sbjct: 107 LAHIADPDQKAQYLE-------------PLARGDLRSAFAMTEPAPGAGSDPAALTTRAD 153

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKN 277
           K++ G + ++GHK F++    +  FI++A+  G  G        L      GL   R   
Sbjct: 154 KVAGG-WRINGHKHFITGADGAGFFIVMARTSGEPGVRGGATMFLAPADTPGLRVGRHIT 212

Query: 278 KIGNRSN--ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            + +R+      E+ F + F     +LG ++      +       +   +  +   R   
Sbjct: 213 TL-DRAMIGGHCEVFFEDVFVPDAAVLGAVDRGFEYAQVRLGPARMTHVMRWLGAARRGH 271

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ +   R   G  + D  + ++ IAD  +DIAA  AL  R     D  +        
Sbjct: 272 DIAVAHVAERAGFGSRIGDLGMAQKMIADNEIDIAATRALLVRACWELDRGEH------- 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A     I K +  +    ++  A++  GG G  ++  +AR  RE     I  G      
Sbjct: 325 AGNATSIAKTYAAEAIFRIVDRAIQLCGGLGVSDDLPLARLSREVRPFRIYDGPSEVHR 383


>gi|84495304|ref|ZP_00994423.1| probable acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
 gi|84384797|gb|EAQ00677.1| probable acyl-CoA dehydrogenase [Janibacter sp. HTCC2649]
          Length = 419

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D  AI +   K  D  Y L+G K +++S   ++  ++ A ++  
Sbjct: 143 AGKWAAMAITEPETGSDSGAIRTTAVKDGDE-YVLNGEKIYVTSGERAELVVVWATLDKS 201

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   +      G+   RL++K+G R++ T      N        L      +E  
Sbjct: 202 LGKQAIKSFVVRRDNPGMKLVRLEHKLGIRASDTAAFHLDNCRVPADDLLGDPEIKIEGG 261

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAI--------HYARRRHVSGGILIDQPVMKRAIADI 362
               +   D+    V+ M + L              A            Q      +  +
Sbjct: 262 FGGAMQTFDNTRPLVAAMALGLTRGCLDTTTELLEKAGVTVDWDKPAYTQSAAAAKLLQM 321

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA AL+ R A   D  K  S EA+ A+  A        +    V    +E  G +
Sbjct: 322 EADYEAAHALTLRAAWMADNGKPNSMEASMAKAKAG-------RTCVNVALACVELAGAT 374

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R+S    I  G+    +L +   L
Sbjct: 375 GYSERELLEKWARDSKILDIFEGTQQIQLLVIARRL 410


>gi|304311098|ref|YP_003810696.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796831|emb|CBL45043.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 399

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 20/276 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
            +    + +TE   G+D AA+++  ++  D  Y L+G K F+++   +D  ++ A ++  
Sbjct: 124 GNKWAAMAITEPGFGSDSAAVSTTAKQDGD-YYVLNGEKIFVTAGERADIVVVWATLDKS 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309
           +G   +     +    G+   RL+ K+G +++ T  + F++       LLG+  +     
Sbjct: 183 LGRAAIKSFAVEKGTPGMQVMRLEKKLGVKASDTAAINFTDCRVHKSNLLGNPEIDVKKG 242

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR------RHVSGGILIDQPVMKRAIADI 362
               ++   D+    V+ M V LA+A +   R       +            ++     +
Sbjct: 243 FGG-VMETFDNTRPLVAAMAVGLAKASLDRTRELLAEHLQLSYDQPTATLSQIQATFYQM 301

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  AA  L+ R A   D  +  S+E       A + K    +   A+  + +E     
Sbjct: 302 EAEWEAARLLTIRAAWMADNGQPNSKE-------ASVAKAKAGRTCNAITLKCVELCSSL 354

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R+S    I  G+     L V   L
Sbjct: 355 GYSETEMLEKWSRDSKILDIFEGTQQIQQLIVARRL 390


>gi|146303059|ref|YP_001190375.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera
           sedula DSM 5348]
 gi|145701309|gb|ABP94451.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM
           5348]
          Length = 387

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 137/379 (36%), Gaps = 33/379 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           + D+          ++++   G+      +              A+     A       +
Sbjct: 30  KIDREGIP---REFVKKASSLGIWAMTASQDVGGQGAGFLLSTIASEEIARADFSMATAV 86

Query: 153 SPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
              + S    ++    +  + +   PK+ S ++              +G+  TE  GG+D
Sbjct: 87  YFLLESGWGYVLDRYGSKSLREAVLPKVISGDWF-------------LGVASTEPTGGSD 133

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVGCFLVPRLLEDG 265
           +A I +   +  D  + L+G K ++S  +         + LA+     G   +       
Sbjct: 134 VAGIRTLATRR-DRKFVLNGQKIYISGVLEAYNWGGGHLTLAKTNPEAGHRGISMFFVPT 192

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
           S  G+   +++N +G    +T  + + N     G L+G+LN       D      +  A 
Sbjct: 193 STQGIEISKIEN-MGRMGISTGTMRYVNAEVPEGNLVGELNRGFYYAMDGFNHARVLVAG 251

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +      L   + Y ++R V    L D   +    A++   +  A  L+++ A   D 
Sbjct: 252 ACIGAAEAILEMGLEYVKQREVFSTKLKDFEAIAFEAAELKTRLEMAKLLNYKAAWMMDR 311

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S+E A    +A ++K    ++A  +    M  +G  GY ++  +   +R   +  +
Sbjct: 312 -EPNSDETAM---LAAMSKLTAPQVAFDIAKSVMMWMGAYGYSKDALVEMGFRGIVSYLV 367

Query: 443 L-LGSGNAMVLDVLNLLEK 460
              G+ N M L +   L K
Sbjct: 368 GAEGAMNVMKLIISRRLFK 386


>gi|254776449|ref|ZP_05217965.1| acyl-CoA dehydrogenase family protein [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 412

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 115/357 (32%), Gaps = 26/357 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            +  GL  S+  R    V      +  A + L L   L+    +  +     M+    T 
Sbjct: 72  WLRYGLPASLGGRDGSNVDMAVIREHLAHKGLGLHNDLQNESSIVGNFPQVIMMERFGTD 131

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              ++W+  + + E              ++  GLTE + G+D   + ++ ++  DG + +
Sbjct: 132 EQRREWSQALITGE-------------RSMAFGLTEPQHGSDATWLQTRAERDGDG-WVI 177

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F +        ++ A+  G  G    +   L      G           N     
Sbjct: 178 NGAKRFNTGVHRATHDLIFARTSGEPGTAVGITAFLVPTDAPGFTVPYYWWTF-NMPTDH 236

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+E ++       +LG+++      +       +  A  S+   +  +  A  YA  R 
Sbjct: 237 GEVELTDVRVPADAVLGEVDRGLEVAQTFLHENRIRQAASSLGAAQYCIDRAAEYAGSRT 296

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  L     ++  +A++  +      L    A   D                 +  Y 
Sbjct: 297 VFGKPLSVNQAVQWPLAELQTEAQMVRLLVQYAAWHLDRDHHME-----VSDKVSMANYR 351

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++       AM+  GG GY         YR      I  G+    +  V   L K
Sbjct: 352 ANRLVCDAADRAMQIFGGLGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFK 408


>gi|289706055|ref|ZP_06502428.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
 gi|289557257|gb|EFD50575.1| acyl-CoA dehydrogenase, C-terminal domain protein [Micrococcus
           luteus SK58]
          Length = 404

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 120/369 (32%), Gaps = 28/369 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E WD+ E+      L+ R     L          P V + A  +    L  +    A   
Sbjct: 55  EAWDRHEYP---LDLVARLGQADLLRDGVPVDGLPDVSRVAAGLAMMELSRLDGSIATMT 111

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 +   + L  +     +  P              M +  +     LTE   G+D 
Sbjct: 112 GVQGGLAMRSIQLCGSEEQRAEHLP-------------AMARGELYGAFALTEPTHGSDS 158

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
            ++ ++ +++  G       KW  +       ++ A+             +      G  
Sbjct: 159 VSLETRAERVDSGWRLHGHKKWIGNGAAGGVTVVWARSAEDEKVRG---FIVRQESEGYT 215

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMR 329
            + +K K+  R+     +     F      L  +    +  ++L    +  A  ++    
Sbjct: 216 AEVIKGKVALRAIDQAHITLDGVFVPDADVLPEARSFKDTSRVLFATRVGVAWSALGKAV 275

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+ YA +R   G  L     ++  +A++   +     L  R     DE +     
Sbjct: 276 GCYEAAVQYAGQRVQFGRPLAAAQSVQTRLAEMLSQLTQVQLLVLRATRLEDEGR----- 330

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                 MA + KY   + A ++ A A + +GG+G + +  +ARH+ +  A     G+   
Sbjct: 331 --LTGPMASMAKYSATRAARSIAANARDLLGGNGILIQNEVARHFADIEAIHTYEGTETV 388

Query: 450 MVLDVLNLL 458
             L +   +
Sbjct: 389 QGLIIGREI 397


>gi|310790443|gb|EFQ25976.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 431

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 135/390 (34%), Gaps = 29/390 (7%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHAL----LRRSIHDGLHCSIWDRSFEPVVRKQAH 133
            + +P +  +   G+  D+   H A   L    L +    G+     D   E      + 
Sbjct: 52  EHISPNILDWEEKGQVPDEARLHYAKAGLIYPDLPKEYRQGVP-LPGDVPAEEWDVFHSL 110

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
            +      + A   +  +   S      V    T    K W   +F+             
Sbjct: 111 VVSYELSKIWAAGVSAGMSGGSTIGVPPVIHHGTDEQKKRWLTGLFTG------------ 158

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR 252
              +  LG TE  GG+D+A + +   K  DG  Y ++GHK +++  +    +  A   G 
Sbjct: 159 -QTSFCLGCTEPTGGSDLANLRTTAIKSEDGSHYVVTGHKKWITGALRATHMTTAVRTGG 217

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
            G   +  L+      G+  +R+ N  G  +  +  +   +       L+G  N     +
Sbjct: 218 SGAGGISVLVIPLDLPGVSRRRITNS-GWNAGDSTWVALDDVKVPADHLIGQENSGFRYI 276

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                      A++     R+ L +A  YA  RH  G  L+   +++  +  +A  + + 
Sbjct: 277 MTNFNRERFILAVLMNGQGRICLEDAWAYAMDRHTFGEPLMAHQIIRHKLVSMARYVESH 336

Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--- 426
            A   ++A       S   E A    +A +      ++A     EA +  GG+GY     
Sbjct: 337 WAWLQQIAYHAQVTGSMGTELASRIALAKVHGGRLLELAN---REAQQIFGGAGYQRGEV 393

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456
              + +  R+   N +  GS   +    + 
Sbjct: 394 GMRVEQINRDLRVNIVGGGSEEIISDLAVR 423


>gi|225439406|ref|XP_002264086.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 446

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 128/367 (34%), Gaps = 28/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      ++ +     +          P +   A  I  A +  +    +  ++ 
Sbjct: 89  WEKAEFP---FHVVPKLAALRIAGGTIKGYGCPGLSVTASAITTAEVSRVDASCSTFILV 145

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +AL  +    + + P +              + +      LTE   G+D ++
Sbjct: 146 HSSLAMLTIALCGSEAQKQKYLPSL-------------AQLNTIACWALTEPDYGSDASS 192

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   ++  G       +W  +S  +D  I+ A+         +   +      GL   
Sbjct: 193 LKTTSSQVEGGWILEGQKRWIGNSTFADVLIIFAR---NTTTNQINGYIVKKGAPGLTAT 249

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     +++F   F      L       +  K+L    +  A   +     +
Sbjct: 250 KIQNKIGLRIVQNGDIQFKKVFVPDEDRLPGVNSFQDTNKVLAVSRVMVAWQPIGISMGA 309

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ + ++  +I A T + +RL   +++ K       
Sbjct: 310 YDMCHRYLKERKQFGAPLAAFQINQQKLVEMLGNIQAMTLVGWRLCKLYEKGK------- 362

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A   +A   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 363 MTPGHASLAKAWITLKARETLALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 422

Query: 452 LDVLNLL 458
           L     +
Sbjct: 423 LVTGREI 429


>gi|126669238|ref|ZP_01740147.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
 gi|126626300|gb|EAZ96985.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17]
          Length = 237

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 25/252 (9%)

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           DG Y L+G K W  +SP++D  ++ A+    + ++  F++ R        G    +++ K
Sbjct: 1   DGGYSLTGAKIWITNSPIADIAVVWAKSAAHDNQIKGFIIER-----GTTGFSTPKIEGK 55

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           +  R++ T E+   N F     + N+             L+ A   ++   +  AE   +
Sbjct: 56  VSLRASVTGEIVLDNAFVP---EENLLPNVSGLKGPFGCLNKARFGIAWGVMGTAEFCWH 112

Query: 339 ARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           A R     R   G  L    ++++ +AD+  +I      + ++    D          +A
Sbjct: 113 AARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQAALQVGRLMDSGN-------WA 165

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
             M  + K   C  A  +  ++ +  GG+G  +E  + RH     + +   G+ +   L 
Sbjct: 166 PEMVSLIKRNNCGKALDIARQSRDMHGGNGVSDEYGVIRHMVNLESVNTYEGTHDIHAL- 224

Query: 454 VLNLLEKGTNLF 465
           +L   + G   F
Sbjct: 225 ILGRAQTGLQAF 236


>gi|21225084|ref|NP_630863.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)]
 gi|20520763|emb|CAB39724.2| probable acyl-coA dehydrogenase [Streptomyces coelicolor A3(2)]
          Length = 379

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 121/353 (34%), Gaps = 23/353 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASMVAL 164
           R + H GL+  + +  +  V   + +      L    L  +  +  ++       +++A 
Sbjct: 38  RGAHHPGLYGRLAELGWLGVCLPEEYGGAGGGLADACLFLEETSYGMVPAGGFITTVIAA 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R         F  E               + + ++E   G+D+ A+  + ++ +DG
Sbjct: 98  KAYER---------FGTEKQRHEVLSGVVRGDVLSIAMSEPEAGSDVGALRCRARRAADG 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            + + G K ++S+      I+L    G      +          G+  + + + +G R  
Sbjct: 149 TWLIDGQKTWISNAHCARSILLVARTGEDKHGGLTMFHLPADTPGVEVRGI-DTMGGREV 207

Query: 285 ATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
              ++  +         +         +        L  A   +   R +  +A+ Y R 
Sbjct: 208 N--DVFLTGVRLPADAVVGQVDDGWRQLMAGLNHERLFLASNMLGLARRAFDDALGYVRE 265

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +AD+A +I     L   +A   D    R          A + K
Sbjct: 266 REQFGRPVGSFQALRHRVADLATEIECTRLLVRDVALDCDAQPDR-----LFPREASMAK 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               ++A     E M+ +GG GY  E  + RH R +  +++  G+       +
Sbjct: 321 LKATEVAKRAALEGMQMMGGYGYTTEFDMERHLRAAVVSTVYGGTSEIQRDVI 373


>gi|239501892|ref|ZP_04661202.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900]
          Length = 401

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +++ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERANSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F++        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDSNYSTPYLQTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|325520423|gb|EGC99535.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           TJI49]
          Length = 388

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 113/347 (32%), Gaps = 30/347 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASMV 162
                    G      D ++              R      A L     +  ++   + V
Sbjct: 40  DFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRTISASGAGLSGASAVHMNIFGLNPV 99

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  +      + P             P+          +TE   G D   +++Q ++  
Sbjct: 100 QVFGSDAQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLSTQARRDG 146

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           D         W  ++ +++  +++A+             +     +     +  + ++ K
Sbjct: 147 DHYVLSGRKIWISTAQVANRMLIIARTTPLDAVARPTDGLSLFYTELDRAHVEVREIE-K 205

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G ++  +  L   N       L+G+       +        +  A  ++   + +L  A
Sbjct: 206 MGRKAVDSNMLFIDNLRVPRDDLIGNEGEGFRYLLHGLNPERILIAAEAIGLGQAALRRA 265

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA+ R V G  +     ++  +A   + + AA  +  + A  +D  +S   EA  A+ 
Sbjct: 266 TQYAQERVVFGRPIGQNQAIQHPLAQAWMQLEAAWLMVMKAATRYDAGQSCGAEANAAKY 325

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +     +  C+ A A        +GG GY +E  + R+ RE     +
Sbjct: 326 LGAEAAFQACQTAVA-------TLGGMGYAKEYHVERYLRECMIPRL 365


>gi|145221329|ref|YP_001132007.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145213815|gb|ABP43219.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 418

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 121/368 (32%), Gaps = 26/368 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    L +++   GL              + A         +    EA +  +P   +
Sbjct: 45  VPPVVEELKKQAKERGLWNLFLPSVSGLSNLEYAPLAELTGWSMEIAPEATNCAAPDTGN 104

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQ 217
              + L  T      W   + + E                   +TE     +D   I + 
Sbjct: 105 METLHLFATEEQRTQWLEPLLAGEIR-------------SAFAMTEPAVASSDARNIETT 151

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQ 273
             +  D  Y ++G KW+++    P     I++ +             +L      G+  +
Sbjct: 152 MLRDGDD-YVINGRKWWITGAADPRCKILIVMGRTNPDGPSHRQQSMILVPTDTPGVSIE 210

Query: 274 RLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           R     G +      E+ F N       LL +        +       +   + ++    
Sbjct: 211 RSLPVFGWQDQHGHCEITFDNVRVPASNLLDEEGSGFAIAQARLGPGRIHHCMRAIGAAE 270

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +LA  +   + R   G  L +Q V++ AIA    DI     L  + A + D+  ++S++
Sbjct: 271 RALALMVDRVQTRIAFGKPLAEQGVVREAIAKSRNDIEQTRMLCHKAAWTIDQHGNKSKD 330

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A     +    K    +MA  VI  A++  GG+G  ++  +AR Y    A  +  G    
Sbjct: 331 AQL---LVAQIKAVAPQMACDVIDRAIQVHGGAGVSDDFPLARLYSWHRAMRLFDGPDEV 387

Query: 450 MVLDVLNL 457
            +  +   
Sbjct: 388 HMRTIARA 395


>gi|83765430|dbj|BAE55573.1| unnamed protein product [Aspergillus oryzae]
          Length = 502

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/315 (20%), Positives = 112/315 (35%), Gaps = 24/315 (7%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      +    T      W P +FS E              +  LG+TE  GG+D
Sbjct: 191 LGGASTIGIPPIIHHGTEEQKAKWLPGLFSWE-------------TSFCLGVTEPNGGSD 237

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +A I +   K +DG         KW   +P +       +      G   +  L+     
Sbjct: 238 VARIRTSAVKSADGRSYVVNGVKKWITGAPWATHMTTAVRTGPEGSGLHGISVLVIPLDS 297

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  Q++ N  G  +  +  ++  +    +   +G+ N     V           AI  
Sbjct: 298 KGVIRQKIYNS-GQNAGGSSFVDLEDVRVPVENFIGEENKGFPIVMKNFNKERYIMAIQC 356

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               R  LA A+ YA  R   G  LI   +++R +A++A  + A  A   +LA     A 
Sbjct: 357 NRKSRTCLAMALSYAMTRKTFGKPLIHNQIIRRKLAELAHRVEAHWAWLEQLAFYITNAP 416

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANS 441
              +    A  +A + K    +M      EA +  GG+GY +  +   + +  R+     
Sbjct: 417 LGWQSPQIASRIA-LLKVQGGQMLELASREAQQIFGGAGYQKGGAGATVEQISRDLRMMV 475

Query: 442 ILLGSGNAMVLDVLN 456
           +  GS   +    + 
Sbjct: 476 VGGGSEEIIADLAVR 490


>gi|318080703|ref|ZP_07988035.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 218

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 13/222 (5%)

Query: 243 FIMLAQVEGRV---GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
            I+ A+          F +  L+ D    G    R  +K+G +++ T EL F++      
Sbjct: 2   VIVCARTAPPKEDDRRFGISLLVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVKVPVA 61

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG+ N     +        L  A+ + +    ++  A  Y + R V G  +      K
Sbjct: 62  DLLGEENKGFAYLGQNLPQERLGIAVGAYAQAAAAVRFAQQYVQDRTVFGKPVAAFQNTK 121

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A    ++ AA A+  R   + D+ +  + EAA A       K +C ++A  VI   +
Sbjct: 122 FELAACKAEVDAAEAVCDRALEAHDKGELTAAEAASA-------KLFCTEVASRVIDRCL 174

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +  GG GY+ E  IAR Y ++  N I  G+   M + +   +
Sbjct: 175 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKMIIAKSM 216


>gi|302880807|ref|XP_003039334.1| hypothetical protein NECHADRAFT_56371 [Nectria haematococca mpVI
           77-13-4]
 gi|256720161|gb|EEU33621.1| hypothetical protein NECHADRAFT_56371 [Nectria haematococca mpVI
           77-13-4]
          Length = 420

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 117/355 (32%), Gaps = 34/355 (9%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEP--VVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           H     L +    DG         +    +   +A  +        A       +  ++ 
Sbjct: 65  HEFPWELSKDLAKDGWLGICLPERYGGSELGISEAAVMLQTISESGAGQGGASSIHMNIF 124

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               +    +      W              AP+ +       G+TE   G D   + S 
Sbjct: 125 GLEPIVKFGSEDQKDRWL-------------APLIQGKERACFGVTEPNSGLDTLRLQSF 171

Query: 218 GQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG------RVGCFLVPRLLEDGSPNGL 270
            ++  D  Y LSG K F+ ++ +S+  ++L +               +     +   + +
Sbjct: 172 ARRKGD-YYELSGSKVFISTAQVSEKILILVRTTPLEDVRKNEPNQGLSLFYTNLDRSAV 230

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
             + +  K+G  +  T  L F         L+G        +        +     ++  
Sbjct: 231 EVKEI-QKMGRAAVDTNALFFDGWKVPAKDLVGQEGEGFRMIMHGMNAERILIGAEALGL 289

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
              +L  A +YA  R V G  +     ++  +A+  +++ +A  + +  A  +D+     
Sbjct: 290 GYAALRRACNYANERVVFGRPIGSNQGIQHPLAECWMNLESARLVVYLAARLYDQGYQDG 349

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           E A   + +A        + A      A+   GG GY +E  + R+ RES  + I
Sbjct: 350 EYANTGKYLAA-------EAAFKTAERAILTHGGMGYAKEYHVERYLRESMISRI 397


>gi|322701978|gb|EFY93726.1| acyl-CoA dehydrogenase, putative [Metarhizium acridum CQMa 102]
          Length = 441

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 128/356 (35%), Gaps = 32/356 (8%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173
           G+    WD     +   +  +   A             + P       +    +  + + 
Sbjct: 94  GVKVEDWDYLHTGIYCDELARSGLAGPGASLTAGFAFGIPP-------IVKWGSKELKER 146

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232
           + P   +                   + +TE   G+D+A IT+  +K +DG  Y ++G K
Sbjct: 147 FLPDFLTG-------------RKRTCIAITEPDAGSDVANITTTAEKSADGKHYIINGAK 193

Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEF 291
            ++++ +   +  +A   G  G   +  ++       G+  +RL    G ++  T  +E 
Sbjct: 194 KWITNGIWSDYTTMAVRTGGPGRAGLSVIIVPLKGHPGVSMRRLPVS-GQKAGGTTYIEL 252

Query: 292 SNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            N       L+G        +        L  A+      R +L+ A  Y  +R   G  
Sbjct: 253 DNVKVPVENLVGREGDGLRIILTNFNHERLIIAVGVTRQARTALSAAFEYCLKRDAFGKK 312

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKM 407
           L+DQPV++  +A    ++    A + ++   +     +S+EA      +  + K     +
Sbjct: 313 LMDQPVVRHRLAKAGAELETMNAWTEQI--LYQLCHLKSQEADLKLGGITALAKAKSAMV 370

Query: 408 APAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                  A+   GG+G+    +   +   YR+ P   I  GS + ++   +  L K
Sbjct: 371 LNECAQCAVLLFGGNGFTASGQGALVEAIYRDVPGARIPGGSEDVLLDLAVRQLVK 426


>gi|300780647|ref|ZP_07090502.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
 gi|300533633|gb|EFK54693.1| possible acyl-CoA oxidase [Corynebacterium genitalium ATCC 33030]
          Length = 402

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 131/368 (35%), Gaps = 30/368 (8%)

Query: 94  WDKVEFH-PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W+K E++ PA    +  +   GL     +   +P +  +A+++    L       A   +
Sbjct: 54  WEKAEYNIPA----VEEAARRGLVTDGIEIDGQPGISIRANRLIQMELARTDASTATAHI 109

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  +   ++   +      +               PM +  +  G  LTE   G+D  
Sbjct: 110 VQSGLAMRSISECGSEDQKAKYL-------------GPMSRMEIRGGFALTEPDHGSDSI 156

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  ++  D        KW     +    ++ A+ E           + D    G   
Sbjct: 157 GLETSARREGDEWVINGEKKWIGHGSVGHITVVWARDEEDGEVKG---FIVDQDQEGYSA 213

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
           + +  K   R      ++ ++        L  S    +  ++L    +  A +++     
Sbjct: 214 ETITGKASLRGIPQAHIKLNDVRVSDDRRLPNSHTFRDTARVLTGTRIAVAWVALGMAID 273

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
              +A+ YA+ R   G  L+   ++++ +AD+  D+ +      RL    +  +   ++A
Sbjct: 274 CYEKALDYAQLRVQFGRPLVKNQIIQQRLADMLQDVTSMALYCRRLLELEEAGELNEKQA 333

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A A       K    + A  + A+A +  GG G + E  +ARH+ +  +     G+    
Sbjct: 334 ALA-------KVHNTRGARKISADARDMFGGVGILLENDVARHHADIESLHTYEGTDTMQ 386

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 387 SLIVGKSI 394


>gi|255932253|ref|XP_002557683.1| Pc12g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582302|emb|CAP80480.1| Pc12g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 441

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 18/296 (6%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL 235
           K  S E        +        + +TE   G+D+A IT+   K +DG  Y L+G K ++
Sbjct: 137 KFGSTELQERFLPELLTGKKRGCIAITEPEAGSDVANITTTAVKSADGQHYILNGSKKWI 196

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++ +   +  +A   G  G   +  L+       G+  +RLK   G  +  T  +E  + 
Sbjct: 197 TNGIWSDYATMAVRTGGPGAAGLSVLVVPLKGHPGVSMRRLKVS-GQITGGTTYIELDDV 255

Query: 295 FGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
              +   +G        +        L  A+      RV+L+ A  Y  +R   G  L+D
Sbjct: 256 KVPVSNIIGKEGDGMRIIMTNFNHERLVIAVGVTRQARVALSAAFSYCLKREAFGKTLMD 315

Query: 352 QPVMKRAIADIALDIAAATALS----FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           QPV++  +A    ++ +  A      ++L +   E   R         +  + K     +
Sbjct: 316 QPVVRHRLAKAGAELESMWAWVEQILYQLVHLSKEEGDRQ-----LGGLTALAKAKSAMV 370

Query: 408 APAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                  A+   GG+G+ +      +    R+ P   I  GS + ++   +  L K
Sbjct: 371 LNECAQTAVLLFGGNGFTKTGQGELVEAILRDVPGARIPGGSEDVLLDLSVRQLVK 426


>gi|269217380|ref|ZP_06161234.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129517|gb|EEZ60602.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 398

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 128/400 (32%), Gaps = 38/400 (9%)

Query: 69  TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128
             +ELA            +    +  +     P        +  + L+       +    
Sbjct: 18  QIRELAE---------GPFDEMQKEIEVTNTFPE--EFYELAKKNDLYRYYLPSIYGGWD 66

Query: 129 RKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
             +   +R    +         HL   +  +  ++    T  +      K          
Sbjct: 67  LSELEILRVQEEFSRGPGGMRMHLHHAADLNWRILDDYGTKELKDQLMDKF--------- 117

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-ML 246
               Q  SV I   LTE+ GGT  A I +   K +DG Y L+G KW +S      +  ++
Sbjct: 118 ----QDKSVYINFALTEQTGGTG-ADIHTTAIKQADGTYLLNGEKWLISHTDCSDYTYVI 172

Query: 247 AQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302
           A  +        +   +      G     + + +G R      L+F+N      +LLG  
Sbjct: 173 AVTDESKEKDDRLSAFVVPNDAPGFEIVPMSHMMGCRGAGHAGLKFTNVKLDPKYLLGVE 232

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362
                       +  +  A  ++   +  L  ++  A  R   G  +  + ++K+ IA++
Sbjct: 233 GQGMEIAIHSLSVSRVHIACSNLGMAQRMLEISLKRANDRVTFGKPIATRQMIKQKIAEM 292

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
              I       +  A  +D   +      Y    A I K +       V  E +E  GG 
Sbjct: 293 QKMIHVLRTAIYDFARDYDINPTN----EYVTEKAAICKLFSIDTVKLVSDEMLEIFGGD 348

Query: 423 GYIEER---SIARHYRESPANSILLGSGNAMVLDVLNLLE 459
           GY E+       R YR+  A  +  G+     + +    +
Sbjct: 349 GYFEDSPYGPTERLYRDCRAMWLEEGAPCVQRITIARQCQ 388


>gi|172060637|ref|YP_001808289.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171993154|gb|ACB64073.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 388

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 117/367 (31%), Gaps = 36/367 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    P+           G      D +               R     
Sbjct: 22  RFGDDYWLERDRAGGFPS--DFHAALAEAGWLGIAMDPAHGGAGLGMTEAALMMRTISAS 79

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 80  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +++Q ++  D         W  ++ +++  +++A+             +
Sbjct: 127 TEPDAGLDTTHLSTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDAVAKPTEGL 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N       L+G+       +      
Sbjct: 187 SLFYTDLDRSRVEVRAIE-KMGRKAVDSNMLFIDNLRVPRDDLIGNEGDGFRYLLHGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 246 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG GY +E  + R+ R
Sbjct: 306 AATRYDAGQSCGAEANAAKYLGAEAAFQACQTA-------IATHGGMGYAKEYHVERYLR 358

Query: 436 ESPANSI 442
           E     +
Sbjct: 359 ECMIPRL 365


>gi|148261560|ref|YP_001235687.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium
           cryptum JF-5]
 gi|146403241|gb|ABQ31768.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5]
          Length = 427

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 135/392 (34%), Gaps = 43/392 (10%)

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
           G+   +    E+AR+           G      D+   +P   A +R     G   ++  
Sbjct: 45  GDDPHAAIRAEVARLCAGFP------GAYWRELDREGTYPE--AFVRALAEGGWLAALIP 96

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
             +       +           A    G      +     +    +      + P+I   
Sbjct: 97  EEYGGSGLGLSAAAAILEEVQHAGCN-GAACHAQMYIMGALLRHGSEAQKARYLPQIARG 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMS 240
           E                  G+TE   GTD  A+ +  ++  D  Y ++G K + S +  S
Sbjct: 156 ELR------------LQAFGVTEPTSGTDTTALRTTARREGDH-YVVNGQKIWTSRAEYS 202

Query: 241 DAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           D  ++LA+   R        G  +    + +    GL  + ++  + N +  T E+ F N
Sbjct: 203 DLMLLLARTTPREQAQKRTDGLSVFLLDMREARQAGLTIRPIRTMM-NHA--TTEVFFDN 259

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  L+G+       +        +      +   +  + +A  YA+ R V G  + 
Sbjct: 260 VRVPAENLIGEEGRGFRYILSGMNAERILIGAECIGDAKWFIDKATAYAKERVVFGRPIG 319

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               ++  IA     + AA  +  R A  F+  ++   EA  A+++A    +   ++   
Sbjct: 320 QNQGVQFPIAKAYARMRAAELMVHRAAALFEAGQNCGAEANMAKMLAAEASWEAAEI--- 376

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +++  GG G+ EE  + R +RE+    +
Sbjct: 377 ----SVQTHGGFGFAEEYDVERKFRETRLYQV 404


>gi|149061277|gb|EDM11700.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_a
           [Rattus norvegicus]
          Length = 333

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 90/265 (33%), Gaps = 28/265 (10%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E      ++++     G+     +  +     + +       +  +A+++A   +   + 
Sbjct: 85  ENSKMEKSVIQGLFQQGMMGIEVEAKYGGT--EASFLCSVLVIEELAKVDASVALLCDIQ 142

Query: 158 SASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +  +  L     T      + PK+               T       L+E   G+D  A+
Sbjct: 143 NTVINKLFRKHGTEEQKATYLPKLV--------------TEKLGSFCLSEAGAGSDSFAL 188

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
            ++  K  +         W  ++  ++ F++ A V+   G   +   L D    G    R
Sbjct: 189 KTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTEGFQIGR 248

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA 333
            +NK+G R+++T +L F N          V        K  I  L+   + ++   + LA
Sbjct: 249 RENKMGIRASSTCQLTFENVKVPETS---VLGKIGHGYKYAIGSLNEGRIGIAAQMLGLA 305

Query: 334 EAI-----HYARRRHVSGGILIDQP 353
           +        Y + R   G  + D  
Sbjct: 306 QGCFDYTIPYIKERMQFGKRIFDFQ 330


>gi|186682449|ref|YP_001865645.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
 gi|186464901|gb|ACC80702.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
          Length = 1284

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/389 (19%), Positives = 139/389 (35%), Gaps = 27/389 (6%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
            D+    P +  L     + GL        +  +        R     +  QL A  L +
Sbjct: 622 IDERRCIPPYIVLD--FGNRGLLGMQIPEEYGGLALSYRDTFR-----VFEQLAAIDL-T 673

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            +   A    L T P +  ++AP+   +E  P             G  +TE+  G++  A
Sbjct: 674 LASFVAVHHVLGTRPIL--NYAPENVRQEILPLLAG----GRELAGFAITEQTAGSNPRA 727

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCY 272
           I ++    + G        W      +    + AQ  +       +   +      G   
Sbjct: 728 IATRAIPDAGGWRIRGEKIWIGHGSWAGVTNVFAQTLDANNQPTGISSFIIRQGTPGFSQ 787

Query: 273 QRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                 +G R      +   +       LLG LN      +D  +   L   +MS+ GM+
Sbjct: 788 GPEALTMGVRGMVQNTIYLKDVLVTPENLLGTLNNGMEVAQDAMMHGRLIIGVMSLGGMK 847

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                 + Y+ RR VS G L++ P+    ++D+   I +   L F++A+  D+ ++  +E
Sbjct: 848 RCAQLMLRYSSRRSVSTGRLLNNPISLVWLSDLTAAITSLETLLFKIADLLDQGRAIPQE 907

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A  A   A     W            ++ +GG GYIE     +  R++    I  G    
Sbjct: 908 AFTACKTAGPELVW------QAADRLVQMLGGRGYIETNIAPQILRDARLFRIFEGPTET 961

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
           + + + +   +  N   +L   L ++LG+
Sbjct: 962 LNMFLGS---RAMNQSAELHRFLSEELGA 987


>gi|88854748|ref|ZP_01129414.1| putative acyl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
 gi|88815909|gb|EAR25765.1| putative acyl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
          Length = 389

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 110/357 (30%), Gaps = 27/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +      G+                ++ +    L          +      + S +A
Sbjct: 51  REFVAELGAQGMLGMHLTGYGAAGANATSYGLVCYELEAADTAWRTFVSVQGSLAMSALA 110

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +P   + W P + +              +      LTE  GG+D A + ++  +  D
Sbjct: 111 YFGSPEQKEQWLPSLATG-------------AAIGCFALTEPTGGSDPAGMLTRATRSGD 157

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
                   +W     ++D  I+ AQ +  V  F+VP         G     +++K   R+
Sbjct: 158 DWVLDGSKRWIGLGTVADVAIVWAQTDEGVRGFVVPT-----DTPGFRAVNIESKHSLRA 212

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARR 341
           +   +L F++        L  + G     + L           +   R  L  AI  ++ 
Sbjct: 213 SIQCDLFFNDLRLPASALLPEARGLSAPFRCLNDARFGIVWGVMGAARDCLDVAIERSKT 272

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +    + ++  AD  ++      L+  LA   D      E+         + K
Sbjct: 273 RQAFGKPIGAMQLTQQKFADSFVEYEKGMLLALHLAKLKDAGTLTPEQ-------ISVGK 325

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               + A  + + A   + G G   +  + RH     +     G+     L +   L
Sbjct: 326 LNNVREAIQIASMARSVLAGDGITGDFPVMRHMNNLESVRTYEGTDEVHTLVLGRAL 382


>gi|146340111|ref|YP_001205159.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192917|emb|CAL76924.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 388

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 119/351 (33%), Gaps = 29/351 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           F   +H  +  +   G+ C   +     +    A  +        A +     +  +V  
Sbjct: 37  FPADFHKAMADAGWLGI-CIPEEYGGSGLGILDAAIMMRTIAESGAGMSGASAIHMNVFG 95

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            + V +  T        P I                S      +TE   G +   + ++ 
Sbjct: 96  LNPVVVFGTKEQRARMLPGIVDG-------------SEKACFAVTEPNTGLNTTQLKTRA 142

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQR 274
            +  D         W  ++ +++  ++LA+       +     +     D   + +    
Sbjct: 143 VRKGDRYVVNGQKVWISTAQVAEKILLLARTTPLEEVKRPTHGLSLFYTDFDRSRIKVHE 202

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   + EL F +    +   LG+       +        +  A  +V    ++
Sbjct: 203 IE-KMGRKPVDSNELFFEDFEIPVEDRLGEEGRGFDYILHGMNPERILIAAEAVGLGHLA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L  A  YAR R+V    +     ++  +A   +++ AA  +  +    +D+  +    A 
Sbjct: 262 LLRASAYARTRNVFNRPIGQNQGVQHPLAKNWMELEAAWLMVLQAGWQYDQGMACGPAAN 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +A    +  C+       +A+   GG GY  E  + R+ RES    I
Sbjct: 322 AAKFLAAEAGFHACE-------QAVMTHGGFGYAREYHVERYLRESLIPRI 365


>gi|39933729|ref|NP_946005.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           CGA009]
 gi|2190574|gb|AAC23920.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           CGA009]
 gi|39647576|emb|CAE26096.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           CGA009]
          Length = 383

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 126/397 (31%), Gaps = 39/397 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L+  A+  A  A+   P            D+         L++     G          
Sbjct: 11  ALAAQARRFA--ADRIAPGFQERDRT-RVLDR--------GLMKAMGEMGFIAPELPEVC 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                A L   ++   +  +  +++    P + + W  K+   E  
Sbjct: 60  GGLGMGSLAAGVIHEEIARADLSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGE-- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          + LTE RGG+D A +  + ++  D  Y ++G K  +S+       
Sbjct: 118 -----------ALFAIALTEPRGGSDAANLRLRIERDGDD-YIVNGEKTSISAADQADAA 165

Query: 245 MLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
           ++    G +  G   V  LL      G+   R  +  G R+     L F N        L
Sbjct: 166 VVFGRTGSIDAGAHGVTALLIPMDLPGITRNRF-DCHGQRAIGRGSLFFENVRVPAAHRL 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD N     V            +  ++  RV+L E   +   R   G  L     +   +
Sbjct: 225 GDENKGFVQVMQGFDFSRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L  +     D     S EAA  +  AP       K+A  VI + +   
Sbjct: 285 ADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKWWAP-------KLAYDVIHQCLLMH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  GY     + +  R+     I  G+   M   +  
Sbjct: 338 GHGGYDRG-PMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|83646189|ref|YP_434624.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
 gi|83634232|gb|ABC30199.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 383

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 132/371 (35%), Gaps = 32/371 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P  + WD  E  PA  +++++  H+G    +       +                     
Sbjct: 27  PYADEWDLHEATPA--SVVKKLAHNGWLGGLAKEESGGLGFDATTFGLLNMAIGAGSGSL 84

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L++        +    TP   + +               P+ K  +      TE   G
Sbjct: 85  TGLLNVHSMVLKTIEDWGTPEQKQQYL-------------TPLVKGEIIGAFAQTEVGAG 131

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
            D   +++Q     D +       W   + ++D F++  + +G     L+P+        
Sbjct: 132 GDSKNLSTQFVDDGDALLVNGQKTWITFAQIADLFLVFGKYQGLDTAVLIPK-----ETP 186

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G      KN +G +S     L+F +        +    G  +++     LD   +SV+  
Sbjct: 187 GFTITAKKNMLGFKSAYLAVLDFVDVRIPKSHIIGKP-GFGQNLISNSALDYGRISVAWA 245

Query: 329 RVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            + + +A   A       R   G +L DQ +++  +A+++  + A+  +          A
Sbjct: 246 ALGVQQAALAASARRANTRSTFGALLADQGIIRGYLAEMSSSLLASQLICLSATK----A 301

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           K   +E A  +I+    K +    A    A+A++  GG G  E   ++R YR++    ++
Sbjct: 302 KESRDEDALEQIL--QAKLFASHEAGTAAAKAVQIHGGHGCDESNGVSRLYRDAKILQVV 359

Query: 444 LGSGNAMVLDV 454
            GS     + +
Sbjct: 360 EGSNELQKMLI 370


>gi|23014714|ref|ZP_00054517.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 390

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 120/377 (31%), Gaps = 65/377 (17%)

Query: 104 HALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
             ++      GL        +  P V   A+ + +  +  +       +   S      +
Sbjct: 50  REIMNEMGEMGLLGPTIPEEYGGPGVNHVAYGLISREVERVDSGYRSAMSVQSSLVMHPI 109

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    K + P++ + E             +    GLTE    +D   + ++     
Sbjct: 110 FSYGTEEQKKKYLPRLATGE-------------IIGCFGLTEPMP-SDPGGMRTRA---- 151

Query: 223 DGIYCLSGHKWFLSSPMSDAF-------------IMLAQVEGRVGCFLVPRLLEDGSPNG 269
                    KW  ++ +++               ++ A+ +   G   +   + +    G
Sbjct: 152 --------KKW--TAAIAERLQDVDHQFAHLGHRLVWAKSDAHEGK--IKGFIVERGTKG 199

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
               +++ K+  R++ T E+     F     L+ + +   GP         L+ A   ++
Sbjct: 200 FSTPKIEGKLSLRASITGEIVLDEAFVPDDALMPNASGLGGP------FGCLNKARYGIA 253

Query: 327 GMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +  AE   +A R     R   G  L    + +  +A++  +I        R+    D
Sbjct: 254 WGVIGAAEFCWHAARQYMLDRKQFGRPLAANQIPQLKLANMMTEITLGLQACVRVGRMMD 313

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           +         +A     + K   C  A  +   A +  GG+G  EE  + RH       +
Sbjct: 314 DH-------TWAPEAVSLIKRNNCGKALDIARMARDMHGGNGISEEFHVIRHMVNLETVN 366

Query: 442 ILLGSGNAMVLDVLNLL 458
              G+ +   L +   +
Sbjct: 367 TYEGAHDVHALILGRAM 383


>gi|319792096|ref|YP_004153736.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315594559|gb|ADU35625.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 388

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +PA    +      G   ++  + +         +       +         
Sbjct: 30  RKIDEARGYPA--EFVDALTKAGWMAALIPQEYGGSGLGLT-EASVIMEEINRCGGNSGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    +++ P+I + E                 +G+TE   GTD 
Sbjct: 87  CHGQMYNMGTLLRHGSEAQKREYLPRIATGELR------------LQSMGVTEPSTGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   K  D         W      SD  I+LA+       +     +   + D   
Sbjct: 135 TKIKTTAVKKGDRYVINGQKVWISRIQHSDLMILLARTTPLADVKKKSEGMSIFIVDLRE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+  Q + N + N    T EL F N       L+G        + D         A
Sbjct: 195 AIGKGMTVQPILN-MVNH--ETNELFFENLEIPAENLIGVEGQGFKYILDGLNAERTLIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   Y + R V G  +     ++  IA+  ++I AA  + +     FD
Sbjct: 252 AECIGDGYWFIDKVTAYTKERVVFGRPIGQNQGVQFPIAEAFIEIEAANLMRYEACRLFD 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+ +A    +             ++  GG G+  E  I R +RE+    
Sbjct: 312 AHEPCGAQANMAKYLAAKASW-------EAANACLQFHGGFGFACEYDIERKFRETRLYQ 364

Query: 442 I 442
           +
Sbjct: 365 V 365


>gi|90075402|dbj|BAE87381.1| unnamed protein product [Macaca fascicularis]
          Length = 430

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 124/335 (37%), Gaps = 44/335 (13%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 122 AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPRL------------- 168

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++ +  S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 169 AKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 228

Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308
            +GR+  FL+     +    GL   R++ K   R++AT  +           + N+  G 
Sbjct: 229 EDGRIRGFLL-----EKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENMLPGA 280

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363
                    L++A   ++   +  +E     A  YA  R   G  L      + +     
Sbjct: 281 SSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARPIRAQNS----- 335

Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
               A       L    D+ K+       A  M  + K   C  A  +  +A + +GG+G
Sbjct: 336 ---EAPFWREAWLDRLKDQDKA-------APEMVSLLKRNNCGKALDIARQARDMLGGNG 385

Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +E  + RH     A +   G+ +   L +   +
Sbjct: 386 ISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 420


>gi|326315030|ref|YP_004232702.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323371866|gb|ADX44135.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 388

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 118/351 (33%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G        ++          I  A L +       A L     +  ++ 
Sbjct: 40  HDFHQALADAGWLGIAMPEAYGGAGL----SISEAALMMHTIAATGAGLSGASAVHMNIF 95

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  T      W P             P+ +       G+TE   G +   + ++
Sbjct: 96  GLHPVVVFGTNEQKARWLP-------------PLIQGRDKACFGVTEPNTGLNTLKLRTR 142

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         W  ++ ++   ++LA+        G   +     D   + +  + 
Sbjct: 143 AVRQGDHYVVHGQKVWISTAQVASKILLLARTTPLEECRGTEGLSLFYTDLDRSTVEVRE 202

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   + ++        +   +G+       +        +  A  +V   R +
Sbjct: 203 IE-KLGRKCVDSNQVFIDGLRIPVEDRVGEEGKGFQYILHGLNPERILIASEAVGLGRAA 261

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA A  YA+ R V G  +     ++  +A   +++ AA  +  + A  +D  +    EA 
Sbjct: 262 LARAAGYAQEREVFGRPIGQNQGIQHPLAQSWMELEAAHLMVQKAAWLYDRHQPCGAEAN 321

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +A    Y  C+ A       +   GG GY +E  + R+ RES    +
Sbjct: 322 AAKYLAAEACYHACERA-------ILTHGGMGYAKEYHVERYMRESWIPRL 365


>gi|197105384|ref|YP_002130761.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
 gi|196478804|gb|ACG78332.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1]
          Length = 445

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/457 (15%), Positives = 138/457 (30%), Gaps = 46/457 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +     LV  +A     + +E+  L          +  R  ++              W+ 
Sbjct: 3   FDLPQDLVDYLAELDDFIEREIRPL------EQQDDNIRFFDHRREYART------DWEN 50

Query: 97  VEFH-PAWHALLRRSIHD----GLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQ 145
                  W  LL  +       G     W          Q           A  L L   
Sbjct: 51  QGLPRKEWEELLAEARRRADAAGHFRYAWPVEMGGKGGSQLAMAVIREHLAAKGLGLHND 110

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L+  H +  +     M     T   ++ +A  + S +                  GLTE 
Sbjct: 111 LQNEHSIVGNNPFVLMFKSFATNEQYERYADALLSGKMR-------------TAFGLTEP 157

Query: 206 RGGTDIAAITSQGQKIS-DGI--YCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-CFLVPR 260
             G+D   + ++  +   DG   + + G K + +   ++   ++ A+  G+ G    +  
Sbjct: 158 NHGSDATFMETRAVREPRDGKPGWRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITC 217

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIY 317
            +      G+  +       N       +  S+ +       G+++   G  +       
Sbjct: 218 FIVPTDNPGINVEEYLWTF-NMPTDHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNR 276

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  S+      + E++ YAR R   G  L +   ++  + +++        L  + A
Sbjct: 277 IRQAASSLGAAVFCIEESVKYARSRKPFGKALAENQAIQWPLVELSTQCEMLRLLIRKTA 336

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    +  E   +     +  YW  ++       AM+  GG GY   +     YR  
Sbjct: 337 WQMDRMDHKQIEKEISDK-VSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHH 395

Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
               I  GS    +  V   L        Q+F  +E 
Sbjct: 396 RRYRITEGSEEIQMRKVAAYLFGYLGPRRQMFKEIEA 432


>gi|167561442|ref|ZP_02354358.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 582

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 138/428 (32%), Gaps = 63/428 (14%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +     LM A          + 
Sbjct: 78  DFHVLWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQVVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPGQKA--------------LRKPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + D +Y ++G K ++S+ M D      + +L ++         + C +VPR   + 
Sbjct: 184 VATPLGDDVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTALDSFSLSCLIVPRFWRND 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    +  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVAVPRKMGLNGCANTHLVFGRSGTTRAHLLGNRKNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDSASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  + 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRIC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFEQLF 469
             A++  GG GY +   + ++ R+    SI  G+      D++       +   L     
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRKPLLLRYFR 482

Query: 470 STLEQDLG 477
             L+  L 
Sbjct: 483 DALDASLA 490


>gi|120401144|ref|YP_950973.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119953962|gb|ABM10967.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 447

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 122/372 (32%), Gaps = 26/372 (6%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D     P    L + +   GL              + A         +    EA +  +P
Sbjct: 54  DDHTVPPVVEELKKLAKARGLWNLFLPSESGLSNLEYAPLAELTGWSMEIAPEATNCAAP 113

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAA 213
              +   + L  T    K W   + + E                   +TE     +D   
Sbjct: 114 DTGNMETLHLFATEEQRKQWLEPLLAGEIR-------------SAFAMTEPAVASSDARN 160

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNG 269
           I +   +  D  Y ++G KW+++    P     I++ +             +L      G
Sbjct: 161 IETTMLRDGDD-YVINGRKWWITGAADPRCKILIVMGRTNPDGPSHRQQSMILVPADTPG 219

Query: 270 LCYQRLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +  QR     G +      E+ F N       LL +        +       +   + ++
Sbjct: 220 VDIQRSLPVFGWQDQHGHCEIVFDNVRVPASNLLDEEGSGFAIAQARLGPGRIHHCMRAI 279

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
                +LA  I   + R   G  L +Q V++ AIA    +I     L  + A + D+  +
Sbjct: 280 GAAERALALMIDRVQTRIAFGKPLAEQGVVREAIAKSRNEIEQTRLLCHKAAWTIDQQGN 339

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +S++A     +    K    +MA  VI  A++  GG+G  ++  +AR Y    A  +  G
Sbjct: 340 KSKDAQL---LVAQIKAVAPQMACDVIDRAIQVHGGAGVCDDFPLARLYSWHRAMRLFDG 396

Query: 446 SGNAMVLDVLNL 457
                +  +   
Sbjct: 397 PDEVHMRTIARA 408


>gi|297819888|ref|XP_002877827.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
 gi|297323665|gb|EFH54086.1| acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 119/365 (32%), Gaps = 28/365 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF      +  +    G+          P +   A+ +  A +  +    +  ++ 
Sbjct: 82  WEKAEFP---FHITPKLGAMGVAGGSIKGYGCPGLSITANAVATAEIARVDASCSTFILV 138

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S      +AL  +    + + P +              + +      LTE   G+D + 
Sbjct: 139 HSSLGMLTIALCGSEAQKEKYLPSL-------------AQLNTVACWALTEPDNGSDASG 185

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K+  G       +W  +S  +D  I+ A+         +   +      GL   
Sbjct: 186 LGTTATKVEGGWKIKGQKRWIGNSTFADLLIIFAR---NTTTNQINGFIVKKDAPGLKAT 242

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           ++ NKIG R     ++   N F      L       +  K+L    +  A   +      
Sbjct: 243 KIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGI 302

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + ++ +  +  ++ A   + +RL   ++  +       
Sbjct: 303 YDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQ------- 355

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                A + K W    A    +   E +GG+G + +  +A+ + +        G+ +   
Sbjct: 356 MTPGQASLGKAWITSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 415

Query: 452 LDVLN 456
           L    
Sbjct: 416 LVTGR 420


>gi|294631911|ref|ZP_06710471.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835244|gb|EFF93593.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 376

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 112/369 (30%), Gaps = 24/369 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D  +          R+   GL        F            A  L    Q      
Sbjct: 24  RRTDPGDHFD--RDDWGRTADLGLTGLCLPEEFGGGGLGA--LDTALCLEAFGQ----CC 75

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   +       L+      +D+A      E        M   SV     +TE   G+D 
Sbjct: 76  LDTGLAFGVAAHLLACAVPIRDFA----GDEVRGQLLKGMADGSVIASNAITEDSAGSDS 131

Query: 212 AAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
           A +     +  D  Y L G K F  ++P+SD  +  A  +   G              GL
Sbjct: 132 ARLGMTAVRDGDH-YVLDGEKSFASNAPLSDVIVTYAVTQPEAGFLGTSGFAVPRDLPGL 190

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                  K+G        + F        +LLG         +            + +  
Sbjct: 191 SVSGPMEKMGLHGCPAGRITFDGVRVPARYLLGSEGQGRTIFQHSMGWERACLFAIYLGV 250

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           M   L   + + R R   G  L D   +   I+ ++  +  A  L +R     D+  + +
Sbjct: 251 MTHQLERCVAHVRSRKQFGRRLADFQAVSHKISVMSERLEGARLLLYRACWLTDQGTADA 310

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
              + A++          + A A   +A++  GG GY+    I +  R++  +++  G+ 
Sbjct: 311 GAVSLAKVA-------VSEAAVANARDAVQVFGGIGYLASTGIEQQLRDAVPSTLFSGTT 363

Query: 448 NAMVLDVLN 456
                 +  
Sbjct: 364 EIHRNVIAR 372


>gi|255603409|ref|XP_002538042.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
 gi|223514055|gb|EEF24341.1| acyl-CoA dehydrogenase, putative [Ricinus communis]
          Length = 355

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 120/356 (33%), Gaps = 29/356 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLMSPSVTSASMV 162
             + R+    GL       +   +       + A +         A  + + +  +    
Sbjct: 9   WDIARKLAEQGLLGITIKEADGGIGGTLMDAVIAIQELAYVCPKSADVVQAGNFGAIRTF 68

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
           A   +P + + + P + S                 +GLG++E   G+    +     +  
Sbjct: 69  AEYASPELKQRFLPDLLSG-------------RALLGLGMSEPEAGSATTELKCSAVEDG 115

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F +    +  +++  +     G   +  ++ +    G    +  + +  
Sbjct: 116 DH-YVINGTKVFSTHSGDATVYLIYVRF--GPGLDGIGSVIVERGTPGFDIGQPSSFMSG 172

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 +L F N        L    G  +      +  + ++  +++  R +   A+ + 
Sbjct: 173 EEW--CQLYFDNCRIPKANLLLGPGGFKKQISGFNVERIGNSSRALALGRHAFNVAVEHC 230

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  L +   ++   A++AL + AA  L +R A + D     + E         I
Sbjct: 231 KTRKQFGRELCEFQGLQWKFAEMALKLEAAQLLLYRAATNADGGIPSAYE-------TTI 283

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            K  C      V  EAM+ +G  GY  E  +    + +    I  GS   +   + 
Sbjct: 284 AKLACNNAGFEVANEAMQTMGAYGYSTEALVEYCVKRTRGWMIAGGSIEVLKNRIA 339


>gi|85703035|ref|ZP_01034139.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
 gi|85671963|gb|EAQ26820.1| acyl-CoA dehydrogenase [Roseovarius sp. 217]
          Length = 392

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 104/286 (36%), Gaps = 18/286 (6%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           F  +   +  A +        + +TEK  G+  + + +  +++  G        W     
Sbjct: 100 FGNKEQKSKVADLVLAGDKPAICITEKDAGSAASDMKTTARRVEGGYILNGTKHWITGGG 159

Query: 239 MSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +S   ++LAQV   + R G        ++    GL     ++ +G R     E+ F + F
Sbjct: 160 VSRTHLVLAQVMEGDERQGIGGFLAFRDE--TEGLHIGNRESAMGLRGIPETEVHFQDMF 217

Query: 296 GFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
                 +    G  +    L+       L +A ++      +   A  +   R   G  +
Sbjct: 218 VPNAMMIRHEKGFGKTFGALMQAYNGQRLGAATVAHGIAVGAFELARDFLLDRKQFGRPI 277

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
            +   ++  IAD+++ + A  AL    A          ++AA A+I+A        + A 
Sbjct: 278 AEFQGLQWMIADMSIALTATEALIRNAAARAGNGFPSLQDAAQAKILAA-------ETAV 330

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            V  +A++  G  GY     + R  R+    +I  G+   +   V 
Sbjct: 331 KVTGDALQLHGARGYSRHLPLERMVRDVRMFTIGGGTVQMLRNQVA 376


>gi|307296269|ref|ZP_07576096.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306878071|gb|EFN09294.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 411

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 127/360 (35%), Gaps = 34/360 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L  ++   GL C      +  +                + L A  + S     A+M+ L
Sbjct: 45  ELRAKARAKGLWCPFIPTDYGGMGLGPLANALVQMELGESYLAALSMNSQGPDDATMLTL 104

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    + +   + + E               +   +TEK  G D   + ++ ++  
Sbjct: 105 LEHGSDYQKERYLKPLLNGEMR-------------VCYSMTEKAAGADATGMQTRAERQE 151

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
           DG Y L+G KWF S+   +D  +++A  +            + D   +G C +R    + 
Sbjct: 152 DGSYLLNGDKWFSSAASHADIAVVMAMTDPTAPRHKRYSTFIVDIPSDGFCIKRDIPTMA 211

Query: 281 NRS-------NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +S       +A  E+E SN       +LG         +       L   + +V+  + 
Sbjct: 212 LQSPLDAMLRHAHSEIEISNVKVPSENILGGEGNGFSMGQHRLAYGRLRHGMHNVAIAQR 271

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +L         R   G +L D+  ++  +A+ A  +  A  +   +A   ++      E 
Sbjct: 272 ALDMTTERVIGRSTFGKLLADRQAVQFMLAECASKLYVARLMILHIAYKAEKGLDLRHE- 330

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                   I K +   M  +V+  A++  G  GY ++  +AR Y +  A  ++ G     
Sbjct: 331 ------NSIAKVYLASMVHSVVDIAIQLHGALGYSQDTPLARWYTQVRAQRLVDGPDEVH 384


>gi|78063331|ref|YP_373239.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77971216|gb|ABB12595.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 395

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 118/376 (31%), Gaps = 39/376 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-----AARLYLMAQLEAG 149
           + V        + +RS   G + +             A         AA    +A    G
Sbjct: 37  EDVWPRDVLRRVWQRSAALGFYTASLPVEIGGQGLSIAEVCALKADLAACGAALAPHVLG 96

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L  P      +     TP     +               P+ +   +    LTE   G+
Sbjct: 97  ELGGPPRVGNML--KYATPAQLDRYFK-------------PVMRGEKSTCFALTEPHSGS 141

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D  +I +   +  D +       +   +P +D  I++   +       +  +L D    G
Sbjct: 142 DAMSIRTTAVEDGDALVINGTKHYISGAPFADFAIVMCVTDASTTPPQITAVLVDLDLPG 201

Query: 270 LCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIM---- 323
           +  +     + G       ++ F +         NV  G     ++ +  ++   +    
Sbjct: 202 VSVEHEYVPMSGQH--IDADIRFVDVRVP---RENVFGGLGNGFRLGMSRINVNRLLHCP 256

Query: 324 -SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +     +   ++ YAR R   GG +     ++  +AD+A  + A  ++          
Sbjct: 257 TMLGLAMSAYRASLDYARTRRQFGGPIARFQAIQHMLADMAAALWACESMIAHT------ 310

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             + ++  A  R+ A   K +  +    V  +A++  G  G      + + +R+     I
Sbjct: 311 -AALADAGADLRMTAAACKLYVSERCFEVADKAVQIHGNVGVTRGHPVEQTFRKLRMFRI 369

Query: 443 LLGSGNAMVLDVLNLL 458
           L G+       +   +
Sbjct: 370 LTGTSEIQRNTIAKAI 385


>gi|299770345|ref|YP_003732371.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
 gi|298700433|gb|ADI90998.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1]
          Length = 401

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAENLLGNAEVDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------VMKRA 358
                 ++   D+    V+ M +  A+A   +  R      +             +    
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPNYSTPYLHASN 295

Query: 359 IA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A     +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|33599553|ref|NP_887113.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
 gi|33567149|emb|CAE31063.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50]
          Length = 388

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 129/354 (36%), Gaps = 28/354 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +   RR    G+    + +               A +  M           S       A
Sbjct: 39  YDTWRRLAELGVINMNFPQDCGGSE---------AGMLAMCLAVEEVCYHDSSYGPVFTA 89

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKIS 222
             T  R    +A +    ++      P+ +        LTE    +  AA   +  ++  
Sbjct: 90  QQTCCRHILRYANEPQRSQWIEEYVLPISRGVAFGATALTEPNSSSSDAASMSTFARRDG 149

Query: 223 DGIYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           D  + ++G+K + ++     +   I+ A V+ +     +   L      G       +K+
Sbjct: 150 DE-WVINGNKMYSTAAGLEGAKFVIVWAIVDKQTRKSGL--FLVPHGTPGFTVGSKLHKM 206

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVE-----DMKILIYLDSAIMSVSGMRVSLAE 334
           G R+  T EL F++        LN            D +    L  A  ++   R  L +
Sbjct: 207 GMRAADTRELFFTDCRIPAAHILNGGAAGQASPFKSDTQYHSKLFLASNAIGLQRYCLDQ 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI +A++R   G  L ++ +++  IA++  DI  +T L  R A  ++     + ++A   
Sbjct: 267 AIDFAKQRKTWGVPLSERQLIQGWIAEMVADIQISTLLRDRAAVLYEAGTLSAADSA--- 323

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               I KY   + A      A E  GG GY++   ++R YR++   +I+ G   
Sbjct: 324 ----ILKYVSAENAVKASHYASEIFGGMGYMDGVGVSRRYRDAKGLTIIQGGST 373


>gi|317034327|ref|XP_001396524.2| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
          Length = 440

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 16/295 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL 235
           K  SRE        +        + +TE   G+D+A IT+   K  DG  Y ++G K ++
Sbjct: 137 KYGSRELQERFLPDLLTGRKRCCIAITEPEAGSDVANITTTATKTPDGKYYLVNGAKKWI 196

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++ +   F  +A   G  G   +  LL       G+  + LK   G  ++ T  +E  + 
Sbjct: 197 TNGIWSDFATMAVRTGGPGASGLSLLLVPLKGHPGVTMRPLKVT-GPITSGTTYIELDDV 255

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+G        +        L  A+      RV+L+ A  Y  +R   G  L+D
Sbjct: 256 KVPVENLVGREGDGMRMIMTNFNHERLSIAVGVTRQARVALSTAFQYCLKREAFGKTLMD 315

Query: 352 QPVMKRAIADIALDIAAATA----LSFRLANSFDEAKSRSEEA--AYARIMAPITKYWCC 405
           QPV++  +A    ++    A    L ++L +   E   R      A A+  A +    C 
Sbjct: 316 QPVVRNRLARAGAELETLGAFVEQLLYQLCHLSKEEGDRRLGGITALAKAKAGMVLNECA 375

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + A  +   A    GG G +    +    RE PA  I  GS + ++   +  L K
Sbjct: 376 QCAILLFGGAGLTQGGQGEL----VESILREVPAARIPGGSEDVLLDLAVRQLVK 426


>gi|319761095|ref|YP_004125032.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115656|gb|ADU98144.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 400

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 139/389 (35%), Gaps = 45/389 (11%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL--YLMAQLEAGHLMSPSVTSASM 161
             L+ R+   GL      R    +      K        Y      A ++ +P   +  +
Sbjct: 44  RELVARARAAGLLTPHASREMGGLGLSHVEKAVVFEEAGYSRLGPTALNIHAPDEGNIHL 103

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +  + TP   + W               P     +     +TE     G D + + +   
Sbjct: 104 MEEVATPAQKERWL-------------RPQVAGELRSCFAMTEPSPGAGADPSMLQATAV 150

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +   G Y ++G KWF++    +D  I++A++E           L D    G+  +   + 
Sbjct: 151 RDG-GDYVINGRKWFITGADGADYAIVMARMEDGSA----TMFLTDMDRPGIVLESNMDA 205

Query: 279 I-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           +     G        L F N       +LG++       +       L   +  +   R 
Sbjct: 206 MDACFTGGHG----VLRFENLRVPAADVLGEIGKGFRYAQVRLAPARLTHCMRWLGQARR 261

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A+ Y RRRH  G  L++   +   +AD  +D+  A    +  A   D+ +  + E+
Sbjct: 262 AHDTALDYVRRRHAFGKPLVEHEGVGFMVADNDMDLHTARLHIWHTAWLLDQGEKCNFES 321

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+++    ++        V+  +++ +GG G   E  + R + +  A  I  G     
Sbjct: 322 SRAKVVCSEAEW-------RVVDRSVQMLGGQGVTGETPVMRIFTDMRAFRIYDGPSEVH 374

Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479
              +   L    +L E+  + L ++ G++
Sbjct: 375 RWSMARKL---AHLSEKAEAELLREGGAA 400


>gi|301348229|ref|ZP_07228970.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056]
 gi|301510755|ref|ZP_07235992.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058]
 gi|301596946|ref|ZP_07241954.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059]
          Length = 194

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 12/201 (5%)

Query: 232 KWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           ++  ++P +  F ++A+      G   +   + D    G+   +   K+G +   T ++ 
Sbjct: 1   RFITNAPHAGVFTVMARTNFDIKGAGGISAFIVDSQTPGISLGKRDKKMGQKGAHTCDVI 60

Query: 291 FSNTFGFLLGDLNV--STGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
           F N        +      G    MK+L    L  A +SV      L ++++YA  R   G
Sbjct: 61  FENCRIPASALIGGVEGVGFKTAMKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFG 120

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             + +  +++  +AD   +I AA  +    A   D  ++ S E       A   K +  +
Sbjct: 121 QPIAEFQLIQAMLADSKAEIYAAKCMVLDAARLRDAGQNVSTE-------ASCAKMFATE 173

Query: 407 MAPAVIAEAMECIGGSGYIEE 427
           M   V    ++  GG+GYI E
Sbjct: 174 MCGRVADRCVQIHGGAGYISE 194


>gi|110679014|ref|YP_682021.1| acyl-CoA dehydrogenase domain-containing protein [Roseobacter
           denitrificans OCh 114]
 gi|109455130|gb|ABG31335.1| acyl-CoA dehydrogenase, C-terminal domain [Roseobacter
           denitrificans OCh 114]
          Length = 378

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 17/291 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
           +  +      AP+        + +TE   G+    + +  +K  D         W     
Sbjct: 79  YGTDTQKQLCAPLVLAGDKPAICITEPDAGSAATEMRTTARKQGDTYVINGTKHWITGGG 138

Query: 239 MSDAFIMLAQV-EGRVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEF 291
           +S  +++ A+V +G      +   +    P       G      +  +G       EL F
Sbjct: 139 VSKLYLIFARVLDGDGSDLGIGGFIVHVDPGAGIEPPGFYVLGREKTMGLCGMPEAELRF 198

Query: 292 SNTFGFLLG------DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            N                     + +      + + ++++     +L  A  Y   R   
Sbjct: 199 ENLMVGADMALIPPSGFKRGFADLMNAYNSQRVGAGMIAMGVAAGALEHAKKYLLERRQF 258

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  L +   ++  IAD+   + AA  L    A S     S+  +      MA   K +  
Sbjct: 259 GRPLAEFQGLQWMIADMDTQLCAARLLLHAAAQSRGPGGSQFPD----MTMAARAKLFAS 314

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           +MA   ++++++  G  GY +   + R YR+    +I  G+   +   +  
Sbjct: 315 EMAIKTVSDSLQMFGARGYGDREPLERMYRDVRMFTIGGGTAQVLRTQIAG 365


>gi|295700877|ref|YP_003608770.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
 gi|295440090|gb|ADG19259.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002]
          Length = 387

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 117/361 (32%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +      G   ++  + F                   A       
Sbjct: 29  RKVDEARDYPE--EFVDALTKAGWLAALIPQEFGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + PKI + +                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSEEQKRKYLPKIANGDLR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +  ++  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TRIKTTAERRGDRYVINGQKVWISRVQHSDLMILLARTTPLADVKKKSEGMSIFIVDLRE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
            + +GL  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 ATGHGLTVQPILN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFKYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   YA+ R V G  +     ++  IA   +++ AA+ + F  A  FD
Sbjct: 251 AECIGDGYWFVDKVTEYAKERVVFGRPIGQNQGVQFPIARSFINVEAASLMRFEAARRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 AHQPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|220921210|ref|YP_002496511.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219945816|gb|ACL56208.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 381

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 106/316 (33%), Gaps = 27/316 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A    +        + L  TP       P +             +         LTE   
Sbjct: 86  ADFAFAMQGLGTGALTLFGTPAQRAQVLPGV-------------RAGRSLAAFALTEPEA 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D+A I       + G   L G K ++S+  ++D +++ A+     G   +   L   +
Sbjct: 133 GSDVAQIALTAAPDAAGFVRLDGEKTWISNGGIADHYVVFARSGEAPGARGLSAFLVPAA 192

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIM 323
             GL        I         L F+         +    TG    M  L          
Sbjct: 193 TPGLAVAERLETIAPH--PLARLRFAGCRVPEANRIGEAGTGFKVAMATLDVFRATVGAA 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +L   +   R R + G  L    + + ++A++A  I  A    +R A + D  
Sbjct: 251 ALGFARRALDATLARVRTRQLFGAPLAALQLTQTSLAEMATAIDTAALQVYRAAWTRDAG 310

Query: 384 KSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             R + EAA A+++A        + A  V+  A++  GG G          YRE  A  I
Sbjct: 311 APRITREAAMAKMVA-------TEAAQEVVDRAVQLHGGEGVRAGSVPETLYREIRALRI 363

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   +
Sbjct: 364 YEGATEVQKLVIARQI 379


>gi|294084446|ref|YP_003551204.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664019|gb|ADE39120.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 396

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 127/360 (35%), Gaps = 43/360 (11%)

Query: 103 WHAL-LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA--------QLEAGHLMS 153
           W AL   R+  +    ++    +   +  +A+      L   A        Q        
Sbjct: 37  WRALDADRAYPEAFVAALTKAGYLGCLIPEAYGGSGLDLTAAAVILEEIHKQGANAAACH 96

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             + +   V    +    + + P+I               +      G+TE   GTD  A
Sbjct: 97  AQIYTMGTVLRHGSDAQKRAYLPRIADG------------SLRLQAFGVTEPTSGTDTLA 144

Query: 214 ITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSP- 267
           + +  ++  D  Y ++G K + S +  SD  ++LA+   R         +   L D +  
Sbjct: 145 LQTTARREGD-RYIINGQKIWTSRAEHSDLMLLLARTTPRDAVTKRTDGLSVFLLDLNSL 203

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G+  + +   + N +  T E+ F N       L+GD       +        +  A 
Sbjct: 204 LDKGVTIRPI-RTMINHA--TTEVFFDNVSIPADALIGDEGKGFRYILSGMNAERILIAA 260

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +   +  + +A  YA  R V G  +     ++  +A     + AA A+ +R A  +D 
Sbjct: 261 ECIGDAKWFIDKASAYASERSVFGQPIGKNQGVQFPLAKAYAHMIAAEAIVYRAAACYDA 320

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +    +A  A+++A    +   +         M+  GG  + EE  I R +RE+    I
Sbjct: 321 GEDPGADANMAKLLAADASWEAAEA-------CMQTHGGFAFAEEYDIERKFRETRLYQI 373


>gi|154252151|ref|YP_001412975.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154156101|gb|ABS63318.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 431

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/435 (15%), Positives = 132/435 (30%), Gaps = 34/435 (7%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE-RWD 95
           ++    +   +      + KE++ L     +    +  R           +   G  R D
Sbjct: 3   FTIPKDVTDYLKVLDDFIEKEIKPLQSRDDNDRFFDHRREHAR-----TDWDNQGLPRHD 57

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR----AARLYLMAQLEAGHL 151
                     L  ++ H   +    +   +         IR    A  L L   L+    
Sbjct: 58  WEALLGEMRKLADKAGHLR-YALPKEYGGKDGTNLGMAVIREHLAAKGLGLFNDLQNETS 116

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +  +  +  M     T    K + P                  SV +  GLTE   G+D 
Sbjct: 117 IVGNFPTVLMFRDFGTEEQRKVFIPGSLDG-------------SVRVAFGLTEPEHGSDA 163

Query: 212 AAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGS 266
             + ++G++      DG        W     ++    + A+  G+ G    +   +    
Sbjct: 164 TWMETRGRREKRDGKDGWVINGMKMWNTGMHVATHDFVFARTSGQDGDPLGITCFIVPTD 223

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  +       N       + F+N +      LGD        +       +  A  
Sbjct: 224 TPGVKIEEYLWTF-NMPTDHPRVSFTNVWVPEDAILGDPERGLELAQHFVHENRIRQAAS 282

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            V   +  + E++ YA++R   G  L     ++  + +   +      L ++ A   D+ 
Sbjct: 283 GVGAAQFCINESVKYAKQRKPFGKPLAANQAIQFPLIEAHTECEMIRNLVYKTAWQMDQ- 341

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            S+ + A +      +  Y   ++       A++  GG GY   +     YR      I 
Sbjct: 342 MSKKDVARHLSDKVSMCNYRANRLVCQAADLAIQVHGGMGYSRHKPFEHIYRHHRRYRIT 401

Query: 444 LGSGNAMVLDVLNLL 458
            GS    +  V   L
Sbjct: 402 EGSEEIQMRKVGGHL 416


>gi|118463134|ref|YP_883180.1| acyl-CoA dehydrogenase family protein [Mycobacterium avium 104]
 gi|118164421|gb|ABK65318.1| acyl-CoA dehydrogenase family protein [Mycobacterium avium 104]
          Length = 412

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 115/357 (32%), Gaps = 26/357 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            +  GL  S+  R    V      +  A + L L   L+    +  +     M+    T 
Sbjct: 72  WLRYGLPASLGGRDGSNVDMAVIREHLAHKGLGLHNDLQNESSIVGNFPQVIMMERFGTD 131

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              ++W+  + + E              ++  GLTE + G+D   + ++ ++  DG + +
Sbjct: 132 EQRREWSQALITGE-------------RSMAFGLTEPQHGSDATWLQTRAERDGDG-WVI 177

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F +        ++ A+  G  G    +   L      G           N     
Sbjct: 178 NGAKRFNTGVHRATHDLIFARTSGEPGTAVGITAFLVPTDAPGFTVPYYWWTF-NMPTDH 236

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+E ++       +LG+++      +       +  A  S+   +  +  A  YA  R 
Sbjct: 237 GEVELTDVRVPADAVLGEVDRGLEVAQTFLHENRIRQAASSLGAAQYCIDRAAEYAGSRT 296

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  L     ++  +A++  +      L    A   D                 +  Y 
Sbjct: 297 VFGKPLSVNQAVQWPLAELQTEAQMVRLLVQYAAWHLDRDHHME-----VSDKVSMANYR 351

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++       AM+  GG GY         YR      I  G+    +  V   L K
Sbjct: 352 ANRLVCDAADRAMQIFGGLGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFK 408


>gi|256783763|ref|ZP_05522194.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 379

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 121/353 (34%), Gaps = 23/353 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASMVAL 164
           R + H GL+  + +  +  V   + +      L    L  +  +  ++       +++A 
Sbjct: 38  RGAHHPGLYGRLAELGWLGVCLPEEYGGAGGGLADACLFLEETSYGMVPAGGFITTVIAA 97

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R         F  E               + + ++E   G+D+ A+  + ++ +DG
Sbjct: 98  KAYER---------FGTEKQRHEVLSGVVRGDVLSIAMSEPEAGSDVGALRCRARRAADG 148

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            + + G K ++S+      I+L    G      +          G+  + + + +G R  
Sbjct: 149 TWLIDGQKTWISNAHCARSILLVARTGEDKHGGLTMFHLPADTPGVEVRGI-DTMGGREV 207

Query: 285 ATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
              ++  +         +         +        L  A   +   R +  +A+ Y R 
Sbjct: 208 N--DVFLTGVRLPADAVVGQVDDGWRQLMAGLNHERLFLASNMLGLARRAFDDALGYVRE 265

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +AD+A +I     L   +A   D    R          A + K
Sbjct: 266 REQFGRPVGSFQALRHRVADLATEIECTRLLVREVALDCDAQPDR-----LFPREASMAK 320

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               ++A     E M+ +GG GY  E  + RH R +  +++  G+       +
Sbjct: 321 LKATEVAKRAALEGMQMMGGYGYTTEFDMERHLRAAVVSTVYGGTSEIQRDVI 373


>gi|83943346|ref|ZP_00955805.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
 gi|83845578|gb|EAP83456.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36]
          Length = 443

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 113/376 (30%), Gaps = 33/376 (8%)

Query: 101 PAWHALLRRSIH----DGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLEAGH 150
           P W AL+  ++H     GL+       F                  A  L L   L++ H
Sbjct: 56  PEWEALMAEAVHRADKAGLYRFSLPAEFGGQDGGNLAMAVVREHMAAKGLGLFNDLQSEH 115

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +  +     M+    T    + +     S +               +  GLTE+  G+D
Sbjct: 116 SVIGNFPVIVMLRDFGTEAQKQTFISGALSGDIR-------------MAFGLTEEAHGSD 162

Query: 211 IAAITSQGQK---ISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGC-FLVPRLLEDG 265
              + ++  +        + + G K + +   +    +  A+  G  G    +   L   
Sbjct: 163 ATHMETRAVRETRDGKSGWRIDGEKMWTTGMHTATHCVTFARTSGEDGAADGITAFLVPA 222

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              GL  +       N       + F++ +     + G         +       +  A 
Sbjct: 223 QTPGLKIEEYLWTF-NMPTDHPRISFNDVWVPDDLMFGPEGGGLALAQAFVHENRIRQAA 281

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+      + E++ YAR R   G  L     ++  + ++A        L  + A   D 
Sbjct: 282 SSLGAAVYCIEESVRYARARKPFGKELATNQAIQFPLVELATQAEMLRQLIRKTAWEMDR 341

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                E A        +  Y   ++       AM+  GG GY   +     YR      I
Sbjct: 342 -MPHPEVAKKLSAKVSMCNYQANRLCCEAADRAMQIHGGIGYSRHKPFEHIYRHHRRYRI 400

Query: 443 LLGSGNAMVLDVLNLL 458
             G+    +  V   L
Sbjct: 401 TEGAEEIQMRKVGAWL 416


>gi|326383338|ref|ZP_08205026.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198088|gb|EGD55274.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 406

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+T+      D  Y ++G K F+++   +   ++ A V+  
Sbjct: 130 GEVWASMAITEPSFGSDSAAVTTTATLDGDE-YVINGEKIFVTAGSRASHIVVWASVDRS 188

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVS 305
           +G   +   +      G+   RL++K+G R++ T  + F +         G    D+   
Sbjct: 189 LGRAAIKSFVVPREHPGVTIVRLEHKLGIRASDTAVIRFEDCRIPKEFLLGSPEVDVKKG 248

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADI 362
            G V           A M+V   R +L E    +  A           DQP        +
Sbjct: 249 FGGVMQTFDNTRPMVAAMAVGVTRAALEELRTLLEDAGLEIDYDRPAADQPAAVAEFIRM 308

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ R A   D     S EA+ ++  A        +    V  +A+E     
Sbjct: 309 ESDYEAAYLLAIRAAWMADNKMPNSLEASMSKAKAG-------RTGTDVTNKAVELASTY 361

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R+S    I  G+     L +   +
Sbjct: 362 GYSERTLLEKWARDSKILDIFEGTQQIQQLIIARRV 397


>gi|253560549|gb|ACT32985.1| putative isovaleryl-CoA dehydrogenase [Culex pipiens pipiens]
          Length = 190

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 11/197 (5%)

Query: 230 GHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
              W  + P +D +I+ A+ +        +   + +    G       +K+G R + T E
Sbjct: 1   SKFWITNGPDADTYIIYAKTDLSAKPQHGITAFIVERDTPGFTQGPKLDKLGIRGSGTCE 60

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           L F +       +LG LN     +        L  A   V  M+ +   A  YA  R   
Sbjct: 61  LIFEDAKVPAKNILGQLNKGVYVLMSGLDYERLVLAAGPVGLMQAACDVAFDYAHSRKQF 120

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              + +  +++  +AD+   + A  A  + +A S D  K+  ++             +C 
Sbjct: 121 NTRIGEFQLLQGKMADMYTTMNACRAYLYSVARSCDLGKANPKD-------CAGVILYCA 173

Query: 406 KMAPAVIAEAMECIGGS 422
           + A  V  +A++ +GG+
Sbjct: 174 EKATQVALDAIQILGGN 190


>gi|325122073|gb|ADY81596.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 401

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAENLLGNAEVDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------VMKRA 358
                 ++   D+    V+ M +  A+A   +  R      +             +    
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYSTPYLHASN 295

Query: 359 IA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A     +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|297191379|ref|ZP_06908777.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150894|gb|EDY64519.2| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 374

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 110/365 (30%), Gaps = 17/365 (4%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRK---QAHKIRAARLYLMAQLEAGHLMSPSVTS 158
           AW A LR    + L           V R    +  ++        A      L+  S+  
Sbjct: 12  AWCARLRSLAEERLRPLAEKGEPGRVNRPLVRELGELGLLERLFTAGALELCLLRESLAY 71

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITS 216
               A           +P + +      ++    +          L+E   G+D AA+  
Sbjct: 72  GCTEAETALALQGLGTSPLVRAGTDAQRDRWLPEVVAGRAVAAFALSEPEAGSDAAALAL 131

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
           +      G       +W  ++P +D + + A+     G   V   L      GL    L+
Sbjct: 132 KAVPDGRGWRLSGEKRWISNAPEADFYTVFARTTEGAGARGVTAFLVPADRPGLAGSALE 191

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
                  +    L F +       LLG+ +           L        +V   + +L 
Sbjct: 192 M---LSPHPIGALTFDDVPVTADDLLGEPDRGFRVAMSTLNLFRPSVGAFAVGMAQAALD 248

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + +   R   GG L D   +   +A++A    AA  L          A +    AA  
Sbjct: 249 ATLAHTAARRAFGGPLSDLQSVAHTVAEMATRTEAARLLV------HAAASAYDAGAADV 302

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K    + A  V+  A++  G         +   YRE  A  I  G+       
Sbjct: 303 PKRAAMAKLLATETAQYVVDSAVQLHGARALQRGHLLEHLYREVRAPRIYEGATEVQRTI 362

Query: 454 VLNLL 458
           +   L
Sbjct: 363 IAKEL 367


>gi|15610276|ref|NP_217656.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis H37Rv]
 gi|15842716|ref|NP_337753.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31794316|ref|NP_856809.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium bovis AF2122/97]
 gi|121639023|ref|YP_979247.1| putative acyl-CoA dehydrogenase fadE23 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148662995|ref|YP_001284518.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis H37Ra]
 gi|148824334|ref|YP_001289088.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis F11]
 gi|167970188|ref|ZP_02552465.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis H37Ra]
 gi|215413007|ref|ZP_03421708.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215432099|ref|ZP_03430018.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis EAS054]
 gi|215447430|ref|ZP_03434182.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T85]
 gi|218754918|ref|ZP_03533714.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|219559186|ref|ZP_03538262.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|224991515|ref|YP_002646204.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800174|ref|YP_003033175.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 1435]
 gi|254233761|ref|ZP_04927086.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis C]
 gi|254365766|ref|ZP_04981811.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552231|ref|ZP_05142678.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188181|ref|ZP_05765655.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|260202286|ref|ZP_05769777.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|260206479|ref|ZP_05773970.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289444704|ref|ZP_06434448.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|289448820|ref|ZP_06438564.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|289555414|ref|ZP_06444624.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 605]
 gi|289571351|ref|ZP_06451578.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|289575852|ref|ZP_06456079.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289755259|ref|ZP_06514637.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis EAS054]
 gi|289759269|ref|ZP_06518647.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis T85]
 gi|289763323|ref|ZP_06522701.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|294993119|ref|ZP_06798810.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis 210]
 gi|297635783|ref|ZP_06953563.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN 4207]
 gi|297732780|ref|ZP_06961898.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN R506]
 gi|298526614|ref|ZP_07014023.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777457|ref|ZP_07415794.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu001]
 gi|306782182|ref|ZP_07420519.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu002]
 gi|306786003|ref|ZP_07424325.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu003]
 gi|306790368|ref|ZP_07428690.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu004]
 gi|306794894|ref|ZP_07433196.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu005]
 gi|306799093|ref|ZP_07437395.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu006]
 gi|306804937|ref|ZP_07441605.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu008]
 gi|306809126|ref|ZP_07445794.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu007]
 gi|306969227|ref|ZP_07481888.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu009]
 gi|306973575|ref|ZP_07486236.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu010]
 gi|307081284|ref|ZP_07490454.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu011]
 gi|307085886|ref|ZP_07494999.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu012]
 gi|313660113|ref|ZP_07816993.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis KZN
           V2475]
 gi|1781227|emb|CAB06275.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE23 [Mycobacterium tuberculosis
           H37Rv]
 gi|13883037|gb|AAK47567.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551]
 gi|31619912|emb|CAD95256.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE23 [Mycobacterium bovis
           AF2122/97]
 gi|121494671|emb|CAL73152.1| Probable acyl-CoA dehydrogenase fadE23 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599290|gb|EAY58394.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis C]
 gi|134151279|gb|EBA43324.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507147|gb|ABQ74956.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium tuberculosis H37Ra]
 gi|148722861|gb|ABR07486.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis F11]
 gi|224774630|dbj|BAH27436.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321677|gb|ACT26280.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 1435]
 gi|289417623|gb|EFD14863.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T46]
 gi|289421778|gb|EFD18979.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CPHL_A]
 gi|289440046|gb|EFD22539.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 605]
 gi|289540283|gb|EFD44861.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis K85]
 gi|289545105|gb|EFD48753.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis T17]
 gi|289695846|gb|EFD63275.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis EAS054]
 gi|289710829|gb|EFD74845.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis GM 1503]
 gi|289714833|gb|EFD78845.1| acyl-CoA dehydrogenase FADE23 [Mycobacterium tuberculosis T85]
 gi|298496408|gb|EFI31702.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214169|gb|EFO73568.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu001]
 gi|308325144|gb|EFP13995.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu002]
 gi|308329360|gb|EFP18211.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu003]
 gi|308333189|gb|EFP22040.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu004]
 gi|308336680|gb|EFP25531.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu005]
 gi|308340520|gb|EFP29371.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu006]
 gi|308344460|gb|EFP33311.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu007]
 gi|308348456|gb|EFP37307.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu008]
 gi|308353086|gb|EFP41937.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu009]
 gi|308357059|gb|EFP45910.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu010]
 gi|308361013|gb|EFP49864.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu011]
 gi|308364622|gb|EFP53473.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis SUMu012]
 gi|323718228|gb|EGB27408.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis CDC1551A]
 gi|326902636|gb|EGE49569.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis W-148]
 gi|328459911|gb|AEB05334.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis KZN 4207]
          Length = 401

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPEFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +G   +   +      G+  +RL++K+G + + T  + F N     G LLG+  +  G  
Sbjct: 184 LGRPAIKSFIVPREHPGVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGKG 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIAD 361
               ++   D+    V+ M V +  A     R  ++G             Q         
Sbjct: 244 FAG-VMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLR 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  A+  LS R A   D     S+EA+ ++  A        +MA  V  + +E  G 
Sbjct: 303 MEADWEASYLLSLRAAWQADNNIPNSKEASMSKAKAG-------RMASDVTCKTVELAGT 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 TGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRL 392


>gi|289753031|ref|ZP_06512409.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE13 [Mycobacterium
           tuberculosis EAS054]
 gi|289693618|gb|EFD61047.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE13 [Mycobacterium
           tuberculosis EAS054]
          Length = 232

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 11/217 (5%)

Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                +++ A   G  G   V  L+ +    G    R  +K+G RS+ T EL +++    
Sbjct: 11  ACGADYVVTAVRTGGPGAAGVSLLVVEKDTPGFEVTRKLDKMGWRSSDTAELCYTDVAVP 70

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              L+G  N     +    +   +  A  + S  +  L     + R R   G  LI +  
Sbjct: 71  ATNLVGAENSGFTQIARAFVSERIGLAAQAYSSAQRCLDLTAQWCRDRETFGRPLISRQS 130

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIA 413
           ++  +A++A  I  A   +  +       ++    +  +A+  A     W       V  
Sbjct: 131 VQNTLAEMARRIDVARVYAHHVVERQLAGETDLIAQVCFAKNTAVQAGEW-------VAN 183

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           +A++  GG GY+ E  + R YR+     I  G+   +
Sbjct: 184 QAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEIL 220


>gi|262278970|ref|ZP_06056755.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
 gi|262259321|gb|EEY78054.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202]
          Length = 401

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDKK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAQNLLGNAEVDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYSTPYLHTSN 295

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYRMEAEWEAARLLMLKSTWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|226508436|ref|NP_001150306.1| LOC100283936 [Zea mays]
 gi|195638260|gb|ACG38598.1| glutaryl-CoA dehydrogenase [Zea mays]
          Length = 436

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 126/366 (34%), Gaps = 30/366 (8%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W+K EF       + +    G+          P +   A  +  + +  +    +  ++ 
Sbjct: 80  WEKAEFP---FNAIPKLASLGVAGGTIKGYGCPGLSITASAVTMSEIARVYASCSTFILV 136

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
            S  +   +AL  +    + + P +              + +      LTE   G+D ++
Sbjct: 137 HSSLAMVTIALCGSEAQKQKYLPSL-------------AQLTTVGCWALTEPNYGSDASS 183

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +   K   G +     +W  +S  +D  ++LA+             +      GL   
Sbjct: 184 LRTLATKAPGGWHIDGQKRWIGNSTFADVLVVLARNADTQQLNG---FIVRKGAPGLKAT 240

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NKIG R     ++  +  F      L       +  K+L    +  A   V      
Sbjct: 241 KIENKIGLRMVQNGDIVLNKVFVPDEDRLPGINSFQDISKVLAISRIMVAWQPVGISMGV 300

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
                 Y + R   G  L    + +  +A +  ++ +   + +RL   ++  K       
Sbjct: 301 FDMCHRYLKERKQFGVPLAAFQLNQEKLARMLGNVQSMVLVGWRLCKLYESGK------- 353

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAM 450
                A + K W  + A  V++   E +GG+G + +  +A+ + +  P  S   G+ +  
Sbjct: 354 MTPGHASLGKAWNSRTAREVVSLGRELLGGNGILADFLVAKAFCDLEPIYS-YEGTYDIN 412

Query: 451 VLDVLN 456
            L    
Sbjct: 413 SLVTGR 418


>gi|20146194|dbj|BAB88984.1| acyl-CoA dehydrogenase [Bacillus cereus]
          Length = 162

 Score =  173 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
             Y L+G K F+++  ++D +++ A  +           + +    G    + ++K+G R
Sbjct: 1   DHYILNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIR 60

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AI 336
           S+ T E+ F +    +    N+     +  K+ +  LD     ++   V +A+     ++
Sbjct: 61  SSPTTEIMFEDCRIPV---ENLLGEEGQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASV 117

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            YAR RH  G  +  Q  +   +AD+A D+ AA  L+++ A  
Sbjct: 118 EYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWL 160


>gi|121592553|ref|YP_984449.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
           JS42]
 gi|222109357|ref|YP_002551621.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus
           TPSY]
 gi|120604633|gb|ABM40373.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42]
 gi|221728801|gb|ACM31621.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY]
          Length = 386

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 124/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +      G   ++  + +       A +       +     
Sbjct: 24  DEYFRKVDEARAYPE--AFVDALTQAGWMAALIPQEYGGSGLTMA-EASVIMEEINRSGG 80

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   +   + +    +    + + PKI S E                 +G+TE   
Sbjct: 81  NSGACHGQMYVMNAIVRSGSEAQKQKYLPKIASGELR------------IQSMGVTEPTT 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLL 262
           G+D   + +   K  DG + ++G K ++S    SD  I+LA+       +     +   L
Sbjct: 129 GSDTTKLKTSAVKK-DGRWVINGQKVWISRIQHSDLMILLARTTPADQVKKRSDGLSCFL 187

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            D      NGL  + + N + N    T EL F N       LLG+       + D     
Sbjct: 188 IDLHQAIGNGLTVRPILN-MVNH--ETNELFFDNLEIPEDALLGEEGKGFKTLLDGLNAE 244

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      +  A  YA+ R V    +     ++  IAD  +++ AA  + ++ 
Sbjct: 245 RTLIAAECIGDGYWFIDRASKYAKERVVFNRPIGQNQGVQFPIADAFIELEAANLMRWKA 304

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D  ++   EA  A+ +A    +             ++  GG G+  E  I R +RE
Sbjct: 305 CEKIDAHQNAGAEANMAKYLAAKASW-------EAANVCLQTHGGFGFACEYDIERKFRE 357

Query: 437 SPANSI 442
           +    +
Sbjct: 358 TRLYQV 363


>gi|159898084|ref|YP_001544331.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891123|gb|ABX04203.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 405

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 132/373 (35%), Gaps = 34/373 (9%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVT 157
           HP    L       GL      R    +            +   +        S  P   
Sbjct: 46  HPEIKQLQAEVKELGLWAGHLPREAGGMGLSIMEYGLLNEIIGRSYFAPRIFGSNAPDSG 105

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITS 216
           +A ++    T   H+ +               P+Q+ +V     +TE    G D   + +
Sbjct: 106 NAEILWHYGTAAQHEHF-------------FWPLQQGAVRSFFSMTEPDVSGADPTLLQT 152

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLV-PRLLEDGSPNGLCYQR 274
             + + D  + ++G KW+ ++     F I++A  +      L   +++      GL   R
Sbjct: 153 TAELV-DDQWVINGRKWYSTNANGAGFGIVMAMTDPDAPTHLRYSQIIVPAETPGLTLVR 211

Query: 275 LKNKIG-NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS-----VSG 327
             + +G        E+E+++         N+     +   I    L    +      +  
Sbjct: 212 PISVMGHTTGGGHWEIEYTDVHVPA---ENLLGKRGQGFAIAQTRLGPGRIHHCMRWLGQ 268

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            + +      Y+ +R   GG L D+ V++  IA+ A +I AA       A   D+A ++S
Sbjct: 269 AQRAFDLMCEYSTKRVAFGGPLADKQVVQHWIAESAAEIQAARLSVLHAAWQIDQAGAKS 328

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
                ARI   + K+    M   V+  A++  GG G  ++  +A  +R+  A+ I  G  
Sbjct: 329 -----ARIDISLIKFSVAAMLMNVLDRAIQVHGGLGVSDDTPLAFMWRQGRASRIYDGPD 383

Query: 448 NAMVLDVLNLLEK 460
               + V   + K
Sbjct: 384 EVHKMVVAREILK 396


>gi|284167040|ref|YP_003405318.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511]
 gi|284016695|gb|ADB62645.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 378

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 137/361 (37%), Gaps = 33/361 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
             +      G         +             +    M  +EA   + P          
Sbjct: 37  ENVELLAEQGFLGINIAEEYGGGGM--------SEFEAMLTIEAVGRVCPDTAEYLYNQQ 88

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
           M  PR     A ++F  E       P +     ++ + ++E   G+D+ ++++   +  D
Sbjct: 89  MVAPR-----AIEMFGSEAVKERYLPGVTAGETSVAVAISEPEAGSDVGSMSTT-VEERD 142

Query: 224 GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G   L+G K ++S    +DA ++ A+    +G      L+ D   +G+   +    + + 
Sbjct: 143 GELVLNGEKIWVSHVEQADAAVVWAKFPEGLGS-----LVLDLDDDGVEIAQHYTNMADH 197

Query: 283 SNATVELEFSNTFGFLLGDLNVST-GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYA 339
                +    +        L     G  + +K L    L SA +S +    ++  A+ YA
Sbjct: 198 VQ--TQFYMEDIVVPEENVLTRGKEGFKDQLKALNWERLGSATLSNAIAGCAIDHALEYA 255

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAP 398
           ++R   G  + D   ++  +AD+   +  + AL++R A N+ ++ +          + A 
Sbjct: 256 QQREQFGQPIGDFQGIEWKLADMVKQLEGSRALTYRAAVNAHEQGRIPDR------LDAS 309

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           I K    +M   V++EA++  G +GY  E  +   YR +    +  G+       + ++L
Sbjct: 310 IAKLTSGEMVEDVVSEALQIHGANGYQREHPLEYLYRVARGRRLAAGTDEIQKNTIASVL 369

Query: 459 E 459
           +
Sbjct: 370 K 370


>gi|226361467|ref|YP_002779245.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226239952|dbj|BAH50300.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 403

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 136/359 (37%), Gaps = 35/359 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L + +   G+        +         +A    AA   L     A ++ +P   +  M
Sbjct: 48  ELQKAAKDAGVFAPHAPVEYGGHGLNMTDRAPVFEAAGYSLFGP-TALNIGAPDEGNVHM 106

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +A + +P   + +              AP+    V     +TE     G+D +A+T++ +
Sbjct: 107 LAHIASPEQKERYL-------------APLAHGDVRSAFAMTEPSPGAGSDPSALTTRAE 153

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKN 277
           K+  G + ++GHK+F++    +  FI+ A+  G  G        L      GL   R  +
Sbjct: 154 KVPGG-WKINGHKYFITGADGAGFFIIFARTSGVPGDRGGATMFLTPADAEGLTVGRHID 212

Query: 278 KIGNRSN--ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            + +R+      E+ F + F     +LG+++      +       +   +  +   R   
Sbjct: 213 TL-DRAMIGGHCEVFFEDLFVPDSGVLGEVDQGFAYAQVRLGPARMTHVMRWLGAARRGH 271

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ +  +R   GG L D  ++++ IAD  +DIAA  AL  R     D+         +
Sbjct: 272 DVAVAHVAQRDGFGGKLGDLGMVQKMIADNEIDIAATRALLTRACWELDQG-------GH 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A     I K +  +    ++  +++  GG G   +  +AR  RE     +  G      
Sbjct: 325 ASNSTSIAKTYAAEAIFRIVDNSVQMCGGLGVSGDLPLARLSREVRPFRVYDGPSEVHR 383


>gi|238482905|ref|XP_002372691.1| acyl-CoA dehydrogenase [Aspergillus flavus NRRL3357]
 gi|220700741|gb|EED57079.1| acyl-CoA dehydrogenase [Aspergillus flavus NRRL3357]
          Length = 433

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 112/315 (35%), Gaps = 24/315 (7%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      +    T      W P +FS E              +  LG+TE  GG+D
Sbjct: 122 LGGASTIGIPPIIHHGTEEQKAKWLPGLFSWE-------------TSFCLGVTEPNGGSD 168

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +A I +   K +DG         KW   +P +       +      G   +  L+     
Sbjct: 169 VARIRTSAVKSADGRSYVVNGVKKWITGAPWATHMTTAVRTGPEGSGLHGISVLVIPLDS 228

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  Q++ N  G  +  +  ++  +       L+G+ N     V           AI  
Sbjct: 229 KGVIRQKIYNS-GQNAGGSSFVDLEDVRVPVENLIGEENKGFPIVMKNFNKERYIMAIQC 287

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               R  LA A+ YA  R   G  LI   +++R +A++A  + A  A   +LA     A 
Sbjct: 288 NRKSRTCLAMALSYAMTRKTFGKPLIHNQIIRRKLAELAHRVEAHWAWLEQLAFYITNAP 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANS 441
              +    A  +A + K    +M      EA +  GG+GY +  +   + +  R+     
Sbjct: 348 LGWQSPQIASRIA-LLKVQGGQMLELASREAQQIFGGAGYQKGGAGATVEQISRDLRMMV 406

Query: 442 ILLGSGNAMVLDVLN 456
           +  GS   +    + 
Sbjct: 407 VGGGSEEIIADLAVR 421


>gi|215405139|ref|ZP_03417320.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
 gi|289746949|ref|ZP_06506327.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
 gi|289687477|gb|EFD54965.1| acyl-CoA dehydrogenase fadE23 [Mycobacterium tuberculosis 02_1987]
          Length = 401

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPEFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
           +G   +   +      G+  +RL++K+G + + T  + F N     G LLG+  +  G  
Sbjct: 184 LGRPAIKSFIVPREYPGVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGKG 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIAD 361
               ++   D+    V+ M V +  A     R  ++G             Q         
Sbjct: 244 FAG-VMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLR 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  A+  LS R A   D     S+EA+ ++  A        +MA  V  + +E  G 
Sbjct: 303 MEADWEASYLLSLRAAWQADNNIPNSKEASMSKAKAG-------RMASDVTCKTVELAGT 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 TGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRL 392


>gi|225682502|gb|EEH20786.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 471

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 135/430 (31%), Gaps = 70/430 (16%)

Query: 81  TPQ-LHAYGPGGERWDKVEFHPAWHALLR-RSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138
            P+ L  +   G         P     +   S+  G+    WD     +V  +  ++  A
Sbjct: 59  PPEALRLHAEKGFTI----IRPTKREYMGGVSMPAGIEPEEWDEFHSLIVVDELSRLGYA 114

Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
            +          L   +      +    +     ++ PK+              +  +  
Sbjct: 115 GV-------IWGLFGGNGIGCPPIMNFGSEAQRLEYMPKV-------------SRGEIRF 154

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
            LG+TE   G+D+A I +  ++  +        KW +++ +   +   A   G  G   +
Sbjct: 155 CLGITEPDAGSDVANIKTTAKRSGNKYIVNGAKKW-ITNGLWADYCTAAVRTGGPGRKGI 213

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
             L+   +  G+  +R++N  G  ++ +  +EF +       L+G  N     +   K++
Sbjct: 214 SLLIVPLAAKGVTRRRMENS-GVNASGSTFIEFDDVEVPVENLIGTENHGFTYIMSSKLV 272

Query: 316 I------------------------------------YLDSAIMSVSGMRVSLAEAIHYA 339
                                                 L  A   +   RV   +A +YA
Sbjct: 273 TLVPNNPLSPPFPGLPIYPRSQKFSIQTNHQEDFNPERLSMAAACIRLSRVCAEDAYNYA 332

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  LI   +++   +     I    A   +L  +   A     +      M  +
Sbjct: 333 ITRETFGQPLIANQIIRAKFSKFGELIEPCQAYLEQLTYTLHVAAKTGRQDVDVGGMTAL 392

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLN 456
            K    +    V  EA + +GG+GY +      I +  R+     +  GS   +    + 
Sbjct: 393 LKVMTTRCLEKVCREAQQVMGGAGYNKSGKGARIEQISRDVRVFVVGGGSQEILSDLAVR 452

Query: 457 LLEKGTNLFE 466
              K  +  +
Sbjct: 453 QEMKNLDGLQ 462


>gi|52421827|gb|AAU45408.1| BbsG [Azoarcus sp. T]
          Length = 406

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 119/376 (31%), Gaps = 31/376 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASM 161
            L+  +   G      D            K          L+     G  + P   +   
Sbjct: 53  RLMNMTREMGFWGIEVDEKLGGQGLGMFAKTLVVEEMSKSLIGFSHHGFTLPPDAPNLYY 112

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    TP   + +  +    E             +   +  TE   G+DI+ +T+   ++
Sbjct: 113 LDECGTPAQREKYLRRYCRGE-------------IESAMMATEPGAGSDISGLTTTAVRV 159

Query: 222 SDGIYCLSGHKWFLSSPMSDA--FIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
            DG + ++G K F+S    D   FI +A  +        +   + D    GL        
Sbjct: 160 -DGQWVINGSKIFISKCDKDDLFFICIAVTDREAATKRRLTAFILDKDTPGLRIGAEIPV 218

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG  +  T  +   N       +LG++  +  P+++   +  ++ A          +   
Sbjct: 219 IG--AMPTWTVYLDNVRVGDDAVLGEVGDAFIPLQNRFGVRRIELAAHCTGMAERLIQMM 276

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I  A  R   G  L ++  ++  IAD  +++       +  A   D+           RI
Sbjct: 277 IEQANLRKTFGEPLAERQTVQNWIADSTVELEQVRLQLYYTAWKSDQGHKD------LRI 330

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A   K    +M   V   A++  GG G   E  I    R      I+ G+     + + 
Sbjct: 331 EASSLKIAATEMLTRVADRAIQLHGGLGLSRELGIEYVSRMVRIWRIVEGASEIHRMSIA 390

Query: 456 NLLEKGTNLFEQLFST 471
             L      +    + 
Sbjct: 391 KKLLADGRTYSPFMAA 406


>gi|289767645|ref|ZP_06527023.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
 gi|289697844|gb|EFD65273.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24]
          Length = 380

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 121/353 (34%), Gaps = 23/353 (6%)

Query: 108 RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASMVAL 164
           R + H GL+  + +  +  V   + +      L    L  +  +  ++       +++A 
Sbjct: 39  RGAHHPGLYGRLAELGWLGVCLPEEYGGAGGGLADACLFLEETSYGMVPAGGFITTVIAA 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
               R         F  E               + + ++E   G+D+ A+  + ++ +DG
Sbjct: 99  KAYER---------FGTEKQRHEVLSGVVRGDVLSIAMSEPEAGSDVGALRCRARRAADG 149

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            + + G K ++S+      I+L    G      +          G+  + + + +G R  
Sbjct: 150 TWLIDGQKTWISNAHCARSILLVARTGEDKHGGLTMFHLPADTPGVEVRGI-DTMGGREV 208

Query: 285 ATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
              ++  +         +         +        L  A   +   R +  +A+ Y R 
Sbjct: 209 N--DVFLTGVRLPADAVVGQVDDGWRQLMAGLNHERLFLASNMLGLARRAFDDALGYVRE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +AD+A +I     L   +A   D    R          A + K
Sbjct: 267 REQFGRPVGSFQALRHRVADLATEIECTRLLVREVALDCDAQPDR-----LFPREASMAK 321

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               ++A     E M+ +GG GY  E  + RH R +  +++  G+       +
Sbjct: 322 LKATEVAKRAALEGMQMMGGYGYTTEFDMERHLRAAVVSTVYGGTSEIQRDVI 374


>gi|296140524|ref|YP_003647767.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028658|gb|ADG79428.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 389

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 120/343 (34%), Gaps = 25/343 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L + +   GL        +                          L+     + ++++ 
Sbjct: 44  ELWKAAGDLGLVGVNIAEQYGGGGAGMYELGIVGEELAAVGSSLLMLVVSPAINGTIISR 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P I S E                   +TE   G++   IT+  ++  D 
Sbjct: 104 FGTEEQKQRWLPGIASGE-------------TIAAFAITEPDAGSNSHRITTTARRDGDD 150

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNR 282
            + +SG K F+S   ++D  +++++ E      L P   L      GL   ++  ++G  
Sbjct: 151 -WIISGQKTFISGIELADVVLVVSRTEDAKSGKLRPALFLMPTDSPGLQKTKIPMEVGLP 209

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
            +    L F +       L+G+ + +   +        + ++  +V   R ++  A+ YA
Sbjct: 210 ESQ-WTLFFDDVRLPSEALVGEPDAAIAQLFAGLNPERIMASAGAVGSARYAIDRAVEYA 268

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R V    +     +   +A++ ++   A  +  + A  +D  +  +         A +
Sbjct: 269 KGRTVFKVPIGAHQAIAHPLAELKVETELAKLMLQKAATLYDAGQEFAA-----AEAANM 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K+   +     +  A+  +GG+G   E  +A+    S    I
Sbjct: 324 AKFAGAEAGAKAVDRAIHSLGGNGLTTEYGLAQMLVASRLFRI 366


>gi|312212338|emb|CBX92421.1| hypothetical protein [Leptosphaeria maculans]
          Length = 2285

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 148/439 (33%), Gaps = 37/439 (8%)

Query: 37   YSSDSLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92
            +S    L  L + +         K      E  L   A E              +     
Sbjct: 1855 FSEPPYLSGLPSPYHKPTHIRWQKACRAFIEEHLLPQALEWDTAETLPEHVFETFARANM 1914

Query: 93   RWDKVEFHPAWHALLRRSIHD--GLHCSI-WDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
                +        L R  + D  G+     WD     +   +  +   A         +G
Sbjct: 1915 LVPSLPAPLPVEWLKRLGVKDILGVVGVEEWDCLHGMIYADEMARTGLAG-------PSG 1967

Query: 150  HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             L +    +   +    +P++ + + P + +                   + +TE   G+
Sbjct: 1968 SLTTGMSFAVPPLLNYGSPQLQERFLPDLLTG-------------KKRTCIAITEPDAGS 2014

Query: 210  DIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSP 267
            D+A I +   K +DG  Y ++G K ++++ +  A+  +A   G  G   +  L+      
Sbjct: 2015 DVANIATTAVKTADGKHYVVNGTKKWITNGIWSAYSTMAVRTGGPGAQGLSLLVVPLKGY 2074

Query: 268  NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMS 324
             G+  +RLK   G  S  T  +E  +       L+G+  +    +        L  AI +
Sbjct: 2075 PGVKMRRLKVG-GQVSAGTTFIELDDVMVPVENLIGEEGMGMKYIMTNFNHERLTIAIGA 2133

Query: 325  VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
                RV+L+ A+ Y   RH     LI QPV++  +A     + + +A             
Sbjct: 2134 TRQSRVALSTALSYTLTRHAFSAPLITQPVIRHRLARAGAQLESLSAW-LDAFVYQQTLL 2192

Query: 385  SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANS 441
            +    A        + K     +       AM  +GG+GY        + R +RE P   
Sbjct: 2193 APDRAAVLLGGPTALLKAQAGIVLHECAQVAMLLLGGNGYTRSGRGELVERIWREVPGIR 2252

Query: 442  ILLGSGNAMVLDVLNLLEK 460
            I  GS + M+   + +L K
Sbjct: 2253 IPGGSEDVMLDLGVRMLVK 2271


>gi|254514601|ref|ZP_05126662.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676844|gb|EED33209.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 190

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 10/193 (5%)

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G    R  +K+G ++  T EL FS+       LLG+       +        L   IM++
Sbjct: 2   GFERGRNLDKVGMKAQDTSELFFSDVRVPKENLLGEEGKGFAYLMQELPQERLSIGIMAM 61

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +     L + I Y + R   G  +      +  +A++  ++ +A     R      + + 
Sbjct: 62  AASHTVLQQTIDYVKERKAFGKPIATFQNTQFKLAELDTELTSAQVFMDRCLELLVQGEL 121

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            +  A+ A+++         ++   ++ E ++  GG G++ E  +AR + +S    I  G
Sbjct: 122 DTVTASKAKLL-------GSELQCRIVDECVQLHGGYGFMWEYPVARAFADSRVQRIYGG 174

Query: 446 SGNAMVLDVLNLL 458
           +   M L +   L
Sbjct: 175 TSEVMKLIIGRSL 187


>gi|325962757|ref|YP_004240663.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468844|gb|ADX72529.1| acyl-CoA dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 396

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 123/340 (36%), Gaps = 33/340 (9%)

Query: 128 VRKQAHKIRAARLYLM------AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
           VR+Q H    A L         A +     +   + + S+ AL  +    + W P I++ 
Sbjct: 74  VRRQGHSNLFAGLLHAEVTRADASISTFMGVHDGLFTGSIEAL-ASEEQKEAWLPDIYAM 132

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMS 240
                              GLTE  GG+D+A    +  ++  D        +W  ++  S
Sbjct: 133 -------------KKIGAFGLTEPLGGSDVAGGTRTTARREGDTWILNGEKRWIGNATFS 179

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300
           D  ++ A+             L D + +G    +++NK   R+    ++   N       
Sbjct: 180 DWVVIYAKDVDDNQVKG---FLVDTALDGFSAVKIENKTALRTVQNADITLRNVAVPDFQ 236

Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
            L  +    +  K+L    L  A  +V     +   A  YA  RH  G  L    +++  
Sbjct: 237 KLAHANSFRDVNKVLKVTRLGVAWQAVGQQLAAFDVARRYAVERHQFGRPLASFQLVQNQ 296

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           +  I  +  ++  +  RL+   D  +++ E++A A       K +        +A     
Sbjct: 297 LVQILGNAVSSMGMMVRLSQLEDAGQAKDEQSALA-------KAFTTTRMRESVALGRNI 349

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GG+G + +  +A+ + ++ A     G+     L     +
Sbjct: 350 LGGNGIVTDFGMAKIFADAEAIYSYEGTHEINTLVTGRAI 389


>gi|317139534|ref|XP_001817575.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 433

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/315 (20%), Positives = 112/315 (35%), Gaps = 24/315 (7%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L   S      +    T      W P +FS E              +  LG+TE  GG+D
Sbjct: 122 LGGASTIGIPPIIHHGTEEQKAKWLPGLFSWE-------------TSFCLGVTEPNGGSD 168

Query: 211 IAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267
           +A I +   K +DG         KW   +P +       +      G   +  L+     
Sbjct: 169 VARIRTSAVKSADGRSYVVNGVKKWITGAPWATHMTTAVRTGPEGSGLHGISVLVIPLDS 228

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            G+  Q++ N  G  +  +  ++  +    +   +G+ N     V           AI  
Sbjct: 229 KGVIRQKIYNS-GQNAGGSSFVDLEDVRVPVENFIGEENKGFPIVMKNFNKERYIMAIQC 287

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
               R  LA A+ YA  R   G  LI   +++R +A++A  + A  A   +LA     A 
Sbjct: 288 NRKSRTCLAMALSYAMTRKTFGKPLIHNQIIRRKLAELAHRVEAHWAWLEQLAFYITNAP 347

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANS 441
              +    A  +A + K    +M      EA +  GG+GY +  +   + +  R+     
Sbjct: 348 LGWQSPQIASRIA-LLKVQGGQMLELASREAQQIFGGAGYQKGGAGATVEQISRDLRMMV 406

Query: 442 ILLGSGNAMVLDVLN 456
           +  GS   +    + 
Sbjct: 407 VGGGSEEIIADLAVR 421


>gi|91976022|ref|YP_568681.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91682478|gb|ABE38780.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 383

 Score =  173 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 129/397 (32%), Gaps = 39/397 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L   A+  A  A+   P            D+         L+R     G         F
Sbjct: 11  ALGDQARRFA--ADRIAPGFQERDRT-RVLDR--------GLMRAMGEMGFIAPELPEQF 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                A L   ++   +  +  +++    P V K W  ++ +    
Sbjct: 60  GGLGLGCLASGVIHEEVARADLSISYINLLASLNGQILSQFGRPEVVKPWLARLTAG--- 116

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                        + + LTE RGG+D A +  + ++  D  Y ++G K  +S+       
Sbjct: 117 ----------DALVAIALTETRGGSDAANLRLRIERDGDD-YIVNGEKTSISAADQADAA 165

Query: 245 MLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
           ++    G    G   V  LL      G+   R  +  G R+     L F N    +   L
Sbjct: 166 VVFGRTGTVEAGAHGVTALLIPMDLPGIGRSRF-DCHGQRAIGRGSLFFENVRVPVSHRL 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD N     V            +  ++  RV+L E   +   R   G  L     +   +
Sbjct: 225 GDENKGFVQVMQGFDFSRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L  +     D+    S EAA  +  AP       K+A  V+ + +   
Sbjct: 285 ADLDTKVEAARLLCLQALWLKDKGAPHSAEAAMCKWWAP-------KLAYDVVHQCLLMH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  GY +   + +  R+     I  G+   M   +  
Sbjct: 338 GHGGY-DSGVMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|115360512|ref|YP_777649.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
 gi|115285840|gb|ABI91315.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
          Length = 1292

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 77/389 (19%), Positives = 142/389 (36%), Gaps = 32/389 (8%)

Query: 114  GLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL     DRS   +   Q   +R  A+L  +    A  +   +      +     P + +
Sbjct: 680  GLLGMPIDRSHGGLGLGQRDMLRVFAQLAAIDSTLAFFVALNNTLGILPIMQHAQPPLRE 739

Query: 173  DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  P + S               +     +TE   G+ + AI S+ Q+   G + ++G+K
Sbjct: 740  ELLPSLASG-------------RMLAAFAITEPAAGSHVRAIASRAQRTESGDWLVTGNK 786

Query: 233  WFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +  SS  +    + A+     G   +          G+     +  +G R      L  
Sbjct: 787  RWSGSSAWAGIINVFARQADGTGMVGLA---VRPGTPGVRIGAEELTMGVRGMIQNSLHL 843

Query: 292  SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                    + LGD+       +    +  L  A + V GM+        Y  RR V  G+
Sbjct: 844  DRARISDAYRLGDIGQGMLVAQHAMNIARLGIAAVCVGGMKRCAQLMHRYGARRQVGTGL 903

Query: 349  LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
            L+D P+ +  + ++   I    AL   LA   D   +  E+         I+K    ++ 
Sbjct: 904  LLDNPLSRLRLGELRDRIDGLDALVEHLAAELDLGVAVPEDCLL------ISKILGSELL 957

Query: 409  PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                 E M+ +GG GYIE     + +R++    I  G    +++ + + L  G++    L
Sbjct: 958  SQSADEMMQFLGGRGYIETNLAPQIFRDARLTRIFEGPTETLLVHLGSRLLNGSD---DL 1014

Query: 469  FSTLEQDLGSSGKKVITILRDSISLCKED 497
               LE+ L  S   +   LR+  +   +D
Sbjct: 1015 LRYLERAL--SAGALARELRELGAQLAQD 1041


>gi|169597827|ref|XP_001792337.1| hypothetical protein SNOG_01704 [Phaeosphaeria nodorum SN15]
 gi|111070233|gb|EAT91353.1| hypothetical protein SNOG_01704 [Phaeosphaeria nodorum SN15]
          Length = 443

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/446 (14%), Positives = 132/446 (29%), Gaps = 51/446 (11%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           +S    L   +A+    + +++  L          +     N        +      WD 
Sbjct: 6   FSIPDDLKQYLADLDKFIDEKITPL----------QHKDDNNRFFDHRREHART--DWDN 53

Query: 97  VEFH-PAWHALL----RRSIHDGLHCSIWDRSFEPVVRKQAHK-----------IRAARL 140
                  W  LL    + +   G +     + +                     + A  L
Sbjct: 54  GGLPRKEWEELLTESRKLADEAGFYRLSLPKQYGGQNSADGRGSNLWMAVIREHLAAKGL 113

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            L   L+  H M  +     M+    + +  +++ P                +    +  
Sbjct: 114 GLFNDLQTEHSMVGNFPDVIMLMGFGSEQQKREFIPL-------------RLEGKFRMTF 160

Query: 201 GLTEKRGGTDIAAITSQG---QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-C 255
           GLTE   G+D   + ++G    +     + L+G+K + +         + A+  G+ G  
Sbjct: 161 GLTEPGHGSDATHMATKGQPETRDGVKGWLLNGYKRWQTGMHHATHCSVFARTSGKDGEI 220

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDM 312
             +   +      GL  +  +  + N       +   N +      LG ++   G  +  
Sbjct: 221 KGISCFIVPVETPGLKAESYEWTL-NMPTDHATVSIKNVWVPETAALGPIHNGLGVAQAF 279

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +  A  S+      + +++ YA  R   G  L     ++  + ++A        L
Sbjct: 280 VHENRIRQAASSLGAAVYCVQQSVEYANERAPFGTPLSHNQGIQFPLVELATQCEMLRQL 339

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
             + A   D      E          +  Y+  ++       A++  GG+GY        
Sbjct: 340 IRKTALEMDS-MPHHEIERRIGDKVSMCNYYANRLCTEAADRAIQVHGGNGYSRHYPFEH 398

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            +R      I  GS    +  V   L
Sbjct: 399 IWRHHRRYRITEGSEEIQMRKVAAYL 424


>gi|111026421|ref|YP_708704.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110825264|gb|ABH00546.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 412

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 126/375 (33%), Gaps = 39/375 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQ----AHKIRAARLYLMAQLEAGHLMSPSVTSAS 160
            L  ++  +GL C    + +  +        A +I   R +      A + M P   +  
Sbjct: 43  ELQAKARAEGLWCPFVPKEWGGMGLGPVANAAVQIEVGRSFSYLGAWAMNCMGPQDATMF 102

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
            +    T    + +               P+    + I   +TE+  G D   + +   +
Sbjct: 103 TLMSHGTDEQKERYLK-------------PLVDGKIRICFSMTERAAGADATGMQTTAVR 149

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNK 278
             D  + L+G KWF SS  +S   +++A+ +            L +    G    R    
Sbjct: 150 DGDE-WVLNGEKWFSSSASISQLALVMARTDPDAPRHKQFSTFLVELPNPGYQIVRNIPV 208

Query: 279 IGNRS---------NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +G                E++  N       LLG +       +       L   + S++
Sbjct: 209 LGEVGEIAYENEVTVGHAEVKIDNLRVPAENLLGGVGEGFSMGQHRLGYGRLRHGMWSIA 268

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             + +L  A  YA  R   G  + D+  ++  +AD A ++  +  +   +A   ++    
Sbjct: 269 KAQAALDMATDYALNRSTFGSPVADRQGIQWMLADAASELYISRLMIMHIAYKMEKGLDI 328

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            +E         I K +   M   V+  AM+  G  G+  +  +A  Y E+    ++ G 
Sbjct: 329 QQE-------NSIAKNYIAHMLHNVVDTAMQIHGSLGFTHDTPLAAWYAEARGQRLVDGP 381

Query: 447 GNAMVLDVLNLLEKG 461
                  +   L K 
Sbjct: 382 DEVHRWKIGRNLIKA 396


>gi|170736270|ref|YP_001777530.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818458|gb|ACA93040.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 395

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 122/384 (31%), Gaps = 30/384 (7%)

Query: 83  QLHAYGPG-GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L       G   + V        + +RS   G + +             A         
Sbjct: 24  ELRPIERELGLDSEDVWPRDVLRRVWQRSAALGFYTASLPVEIGGQGLSIAEV------- 76

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               L+A      +  +  ++  +  P    +   K  +         P+ +   +    
Sbjct: 77  --CALKADLAACGAALAPHVLGELGGPPRIGNML-KYATTAQLDRYFRPVMRGEKSTCFA 133

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D  +I +   +  D +       +   +P +D  I++   +       +  +
Sbjct: 134 LTEPHSGSDAMSIRTTAVEDGDSLIINGTKHYISGAPFADFAIVMCVTDATATPPQITAV 193

Query: 262 LEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
           L D    G+  Q     + G       ++ F +         NV  G     ++ +  ++
Sbjct: 194 LVDLDLPGVSVQHEYVPMSGQH--IDADIRFVDVRVP---RENVFGGIGNGFRLGMSRIN 248

Query: 320 SAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +      +     +   +I +AR R   GG +     ++  +AD+A  + A  ++  
Sbjct: 249 VNRLLHCPTMLGLAMSAYRASIDHARTRRQFGGPIARFQAIQHMLADMAAALWACESMIA 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                     + ++  A  R+ A   K +  +    V  +A++  G  G      + + +
Sbjct: 309 HT-------AALADAGADLRMTASACKLYVSERCFEVADKAVQIHGNVGVTRGHPVEQTF 361

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+     IL G+       +   +
Sbjct: 362 RKLRMFRILTGTSEIQRNAIAKAI 385


>gi|269837821|ref|YP_003320049.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787084|gb|ACZ39227.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 385

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 124/381 (32%), Gaps = 44/381 (11%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRS--IHDGLHCSIWDRSFEPVVRKQAHK------ 134
           +LH       R     F   +      +    +    ++ D SF   +  + +       
Sbjct: 5   ELHRDLRRAVRELCQRFPDEYWREKDAASAYPEEFVKAMTDASFLAALIPEEYGGLGFGV 64

Query: 135 --IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192
                    +             + +   +    +    + + PKI + E          
Sbjct: 65  TEASIILEEVNRSGGNAGACHAQMYTMGTLLRHGSEEQKRKYLPKIATGELR-------- 116

Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG 251
                   G+TE   GTD   I +   +  D  Y +SG K F S    SD  I+LA+   
Sbjct: 117 ----LQAFGVTEPDAGTDTTQIKTTAVRRGD-RYVISGQKVFTSRVQHSDLMILLARTTP 171

Query: 252 R----VGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGD 301
           R         +   L D      +G+  Q ++  + N    T  + F N       L+G+
Sbjct: 172 RDQVKKRSEGLSVFLVDLREAIGHGMEVQPIETMM-NH--ETNAVFFDNLEVPAENLIGE 228

Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361
                  + D      +  A   +      +  +  YA  R V G  +     ++  IA 
Sbjct: 229 EGQGFRYILDGMNAERILIAAECIGDGYWFIDRSTKYASERVVFGRPIGQNQGVQFPIAQ 288

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
             + + AA  + +  A  FD  +    EA  A+++A    +            A++  GG
Sbjct: 289 AYVHLRAADLMRYDAAAKFDRGEPCGAEANMAKLLAADASW-------EAANVAIQTHGG 341

Query: 422 SGYIEERSIARHYRESPANSI 442
            G+ +E  I R +RE+    +
Sbjct: 342 YGFAKEYDIERKFRETRLYQV 362


>gi|327438146|dbj|BAK14511.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046]
          Length = 388

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 118/342 (34%), Gaps = 35/342 (10%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G   ++    +         +       +             + +   +    +    
Sbjct: 48  QAGFLGALIPEQYGGSGL-GILEASVILEEINRSGGNAGACHAQMYTMGTILRHGSSAQK 106

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + + PKI               +      G+TE   GTD   + +  ++  D  Y ++G 
Sbjct: 107 EKYLPKIADG------------SLRLQAFGVTEPNTGTDTTNLKTFAKRDGDH-YIVNGQ 153

Query: 232 KWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED---GSPNGLCYQRLKNKIGNRS 283
           K F+S +  SD  I+L +   +         +  L+ D      NGL  + +K  + N +
Sbjct: 154 KVFISRAEHSDLMILLVRTTPKDQCVKKSDGLSVLIVDLNEAVGNGLEIRPIKTMM-NHA 212

Query: 284 NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
             T EL   N       L+G+       + D      +  A   +   R  +  A +YA+
Sbjct: 213 --TTELFIDNLRVPVENLIGEEGKGFSYILDGMNAERILIAAECIGDGRWFIERATNYAK 270

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R V    +     ++  IA   + I AA  +  + A  +D  ++   EA  A+++A   
Sbjct: 271 ERVVFDRPIGQNQGIQFPIAQAHIHIEAADLMRIKAAELYDRRQACGAEANMAKLLAADA 330

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +            A++  GG G+  E  I R ++E+    +
Sbjct: 331 SW-------EAANVAIQTYGGFGFAAEYDIERKFKETRLYQV 365


>gi|169624459|ref|XP_001805635.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15]
 gi|111056034|gb|EAT77154.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15]
          Length = 449

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 135/372 (36%), Gaps = 42/372 (11%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG------------HLMSPSV 156
           +    G         + P        I    + +   L +              L   SV
Sbjct: 83  KWAKTGFPFGDVPEPYRPKDVPGPAGIPVGEMDIFHLLISTDEGSRIEGGVGTALAGASV 142

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
             A  +    T    K W P +F  E              +  LG+TE  GG+D+A I +
Sbjct: 143 IGAPPIIHHGTEEQKKKWLPGLFDWE-------------TSFCLGITEPSGGSDVANILT 189

Query: 217 QGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQ 273
              K  DG  Y ++G+K +++       +  A   G    G   +  ++   + +GL ++
Sbjct: 190 TANKSPDGKSYIINGYKKWITGMPWATHMTTAVRTGSPDSGARGLSVIVIPTNSSGLTWR 249

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAI--MSVSG--- 327
           R++N  G ++     +E  N    +    N+     E  KI +   +     MS+     
Sbjct: 250 RIENS-GQKAGGASFVELDNVSVPV---ENLLGKENEGFKIIMTNFNKERFIMSIGCNRK 305

Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            R  L+E+  YA +RH  G  ++   ++   +A I   + +  A   +LA    ++ +  
Sbjct: 306 ARTCLSESFDYASKRHTFGKPILSNQIIAHKLATIGRYVESHWAWLEQLAYHIQQSPAGW 365

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILL 444
           ++   A  +A + K    ++      EA +  GG+GY +      + +  R+     +  
Sbjct: 366 QDPEIAGQIA-LAKVHGGRITEMANREAQQIFGGAGYQKGGPGAIVEQMSRDLRMMVVGG 424

Query: 445 GSGNAMVLDVLN 456
           GS   +    + 
Sbjct: 425 GSEEIIADLAVR 436


>gi|119716830|ref|YP_923795.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp.
           JS614]
 gi|119537491|gb|ABL82108.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
          Length = 405

 Score =  173 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 105/276 (38%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V  G+ +TE   G+D A IT+      D  Y L+G K F++S    DA ++ A ++  
Sbjct: 129 AGVWAGMAITEPGTGSDSANITTTAVLDGDA-YVLNGEKIFVTSGDRCDAVVVWATLDRD 187

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+  
Sbjct: 188 LGRAAIKSFVVPKGTPGMRVERLEHKLGIKASDTATIIFDDCRVPRENLLGSPEIDVKQG 247

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRR--HVSG------GILIDQPVMKRAIADI 362
               +   D+    V+ M V  A+A     R     +G         + Q         +
Sbjct: 248 FAGAMATFDNTRPLVASMAVGCAKAALDLTRDLLEQAGVEIDYDRPALSQSAAAAKFLQM 307

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L  + A   D  +  S EA+ A+  A        ++   +    +E  G  
Sbjct: 308 EADWEAAHLLMLQAAWMADNRQPNSLEASMAKAKAG-------RVGSDITLSCVELAGSV 360

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R+S    I  G+     L V   +
Sbjct: 361 GYSEAELLEKWARDSKILDIFEGTQQIQQLIVARRV 396


>gi|241766664|ref|ZP_04764509.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
 gi|241363033|gb|EER58686.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN]
          Length = 386

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 124/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +      G   ++  + +       A +       +     
Sbjct: 24  DEYFRKVDEARAYPE--AFVDALTQAGWMAALIPQEYGGSGLTMA-EASVIMEEINRSGG 80

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   +   + +    +    + + PKI S E                 +G+TE   
Sbjct: 81  NSGACHGQMYVMNAIVRSGSEAQKQKYLPKIASGELR------------IQSMGVTEPTT 128

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLL 262
           G+D   + +   +  DG + ++G K ++S    SD  I+LA+       +     +   L
Sbjct: 129 GSDTTKLKTSAVRK-DGRWVINGQKVWISRIQHSDLMILLARTTPADQVKKRSDGLSCFL 187

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            D      NGL  + + N + N    T EL F N       LLG+       + D     
Sbjct: 188 IDLHQAIGNGLTVRPILN-MVNH--ETNELFFDNLEIPEDALLGEEGKGFKTLLDGLNAE 244

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      +  A  YA+ R V    +     ++  IAD  +++ AA  + ++ 
Sbjct: 245 RTLIAAECIGDGYWFIDRASKYAKERVVFNRPIGQNQGVQFPIADAFIELEAANLMRWKA 304

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
               D  ++   EA  A+ +A    +             ++  GG G+  E  I R +RE
Sbjct: 305 CEKIDAHQNAGAEANMAKYLAAKASW-------EAANVCLQTHGGFGFACEYDIERKFRE 357

Query: 437 SPANSI 442
           +    +
Sbjct: 358 TRLYQV 363


>gi|237786205|ref|YP_002906910.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759117|gb|ACR18367.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 402

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/275 (22%), Positives = 100/275 (36%), Gaps = 19/275 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++   SD  ++ A V+  
Sbjct: 126 GKVWASMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGERSDHVVVWASVDKS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-------VS 305
            G   +   +   S +G   +RL++K+G +++ T  L   N        L          
Sbjct: 185 KGRAAIKSFVVPKSADGFTVERLEHKLGIKASDTAVLRLDNVRVPKENLLGSPEVSTKKG 244

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADI 362
                          A M+V   R +L    E +  A            Q        D+
Sbjct: 245 FAGAMATFDNTRPLVAAMAVGCARGALEKLREVLEDAGEVIDYDKPKYAQSAAVAEYLDL 304

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ R A   D  K  ++E       A I K    ++   V  +A+E  G  
Sbjct: 305 ESDWEAAYLLTLRAAWMADNKKPNTKE-------ASIAKAKAGRVGTHVTLKAVELAGPW 357

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           GY E   + +  R+S    I  G+     L V   
Sbjct: 358 GYSERELLEKWGRDSKILDIFEGTQQIQQLIVARR 392


>gi|192289149|ref|YP_001989754.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
 gi|192282898|gb|ACE99278.1| cyclohexanecarboxyl-CoA dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
          Length = 383

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 127/397 (31%), Gaps = 39/397 (9%)

Query: 65  VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124
            L+  A+  A  A+   P            D+         L++     G        + 
Sbjct: 11  ALAAQARRFA--ADRIAPGYQERDRT-RVLDR--------GLMKAMGEMGFIAPELPEAC 59

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184
             +                A L   ++   +  +  +++    P + + W  K+   E  
Sbjct: 60  GGLGMGSLAAGVIHEEIARADLSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGE-- 117

Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244
                          + LTE RGG+D A +  + ++  D  Y ++G K  +S+       
Sbjct: 118 -----------ALFAIALTEPRGGSDAANLRLRIERDGDD-YIVNGEKTSISAADQADAA 165

Query: 245 MLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---L 299
           ++    G +  G   V  LL      G+   R  +  G R+     L F N        L
Sbjct: 166 VVFGRTGSIDAGAHGVTALLIPMDLPGITRNRF-DCHGQRAIGRGSLFFENVRVPAAHRL 224

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           GD N     V            +  ++  RV+L E   +   R   G  L     +   +
Sbjct: 225 GDENKGFVQVMQGFDFSRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPL 284

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+   + AA  L  +     D     S EAA  +  AP       K+A  VI + +   
Sbjct: 285 ADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKWWAP-------KLAYDVIHQCLLMH 337

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           G  GY     + +  R+     I  G+   M   +  
Sbjct: 338 GHGGYDRG-PMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|21304467|gb|AAM45392.1| putative acyl-CoA dehydrogenase [Propionibacterium freudenreichii
           subsp. shermanii]
          Length = 378

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 127/362 (35%), Gaps = 31/362 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   +      G    +    ++ +      +  AA    + +      +   + 
Sbjct: 37  EYPERWVKAI---CDLGFDRILLPEEYDGLGL--GWQTLAAAYEALGRAGGPTYVLYQLP 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V    T    KD    + S +               +   +TE   G+    +++ 
Sbjct: 92  GWDTVIREGTEEQKKDILKFVGSGKQM-------------LNYAMTEPSAGSSWDDMSTT 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +    +Y L+GHK F++S M   ++++   +             D S  G+  + L +
Sbjct: 139 YSRKGGKVY-LNGHKTFITSSMKVPYLVVMARDADNMGTYTEWF-VDMSLPGITKEPL-H 195

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R ++  ++ F N       L G              L   + A+ +      +  +
Sbjct: 196 KLGLRMDSCADIYFDNVELREEDLFGTEGNGFKRGVKDFDLERFEVAMTNYGTAYCAFED 255

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA +R   G  +  + +++   AD+ +DI     + + +A   D  +         R
Sbjct: 256 AAKYANQRVQGGEAIARKQLIQLKFADMKVDITNMRNMLYEIAWKADNDQ-------LGR 308

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + KY+C   A  V+  A++ + G G   E  + R YR+   + +  G+   M+L  
Sbjct: 309 GDCSMAKYYCSHAAARVVDNALQTLAGVGVTGEHRVQRFYRDLRVDRVSGGTDEMMILAA 368

Query: 455 LN 456
             
Sbjct: 369 GR 370


>gi|319653312|ref|ZP_08007413.1| hypothetical protein HMPREF1013_04029 [Bacillus sp. 2_A_57_CT2]
 gi|317394961|gb|EFV75698.1| hypothetical protein HMPREF1013_04029 [Bacillus sp. 2_A_57_CT2]
          Length = 392

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 119/358 (33%), Gaps = 34/358 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+ + +P   A ++    +G    +    F         +       +         
Sbjct: 35  RDTDERDAYPT--AFVKALTDEGWLSVLIPEEFGGAGL-GMKEAGIILEEINRSGGNAGA 91

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +         + + PKI S E                  G+TE   G+D 
Sbjct: 92  CHAQMYTMGALLRHGNEEQKQRFLPKIASGELR------------LQAFGITEPTAGSDT 139

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGS 266
            +I +  ++  D  Y + G K + S +  SD  ++LA+   +         +   + D  
Sbjct: 140 TSIQTFAERKGD-KYIVHGQKIWTSRAEHSDLMMLLARTTPKDQVQKKTDGLSLFILDMK 198

Query: 267 PNGLCYQ-RLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAI 322
                   R  + + N +  T E+ F         L+G+       V        +  A 
Sbjct: 199 EQADKIDIRPIDTMINHA--TTEVFFEGAEIPAENLIGEEGKGFRYVLGGMNAERILIAS 256

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+      + +++ YA  R V    +     ++  I+   +DI AA  +  + A  FD 
Sbjct: 257 ESIGDGMYFVDKSVQYANERVVFNRPIGQNQGVQFPISRSYMDIQAAKLMRDKAAEMFDA 316

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
                 EA  A+ +A    +            AM+  GG G+ +E +I R +RE+   
Sbjct: 317 GMDCGAEANMAKYLASEATWRA-------ANAAMDTYGGYGFAKEYNIERKFREARLF 367


>gi|325677324|ref|ZP_08156990.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552021|gb|EGD21717.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 404

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 33/358 (9%)

Query: 105 ALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            +   +   GL    +  +     +       +  A  Y +    A ++ +P   +  ++
Sbjct: 48  EMQAEAKGRGLLAPHAPVEFGGLGLNMSDRSPVFEAAGYSLFGPTALNIAAPDEGNVHLL 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQK 220
           A + +P   +++               P+ +  V     +TE     G+D +A+T++ +K
Sbjct: 108 AHVASPAQKEEFL-------------GPLARGEVRSAFAMTEPAPGAGSDPSALTTRAEK 154

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNK 278
              G + ++GHKWF++    +  FI++A+  G  G        L   S  G+   R  + 
Sbjct: 155 APGG-WKINGHKWFITGADGAGFFIVMARTSGAPGDRGGATMFLAPASAPGIRVGRHIDT 213

Query: 279 IGNRSN--ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           + +R+      E+ F + F     +LG ++      +       +   +  +   R    
Sbjct: 214 L-DRAMIGGHCEVFFEDLFVPDDAVLGAVDEGFAYAQVRLGPARMTHVMRWLGAARRGHD 272

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ Y  RR   G  L D  ++++ +AD  +DIAA  AL  R     D+  +       A
Sbjct: 273 VAVDYVARRDGFGSRLGDLGMVQQMVADNEIDIAATRALLTRACWELDQGGT-------A 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                I K +  +    ++  +++  GG G   +  +AR  RE     +  G      
Sbjct: 326 SDSTSIAKTFGAEAIFRIVDRSIQMCGGMGVSGDLPLARLSREVRPFRVYDGPSEVHR 383


>gi|206562521|ref|YP_002233284.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|198038561|emb|CAR54519.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 395

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 122/384 (31%), Gaps = 30/384 (7%)

Query: 83  QLHAYGPG-GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           +L       G   + V        + +RS   G + +             A         
Sbjct: 24  ELRPIERELGLDSEDVWPRDVLRRVWQRSAALGFYTASLPVEIGGQGLSIAEV------- 76

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
               L+A      +  +  ++  +  P    +   K  +         P+ +   +    
Sbjct: 77  --CALKADLAACGAALAPHVLGELGGPPRIGNML-KYATTAQLDRYFRPVMRGEKSTCFA 133

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           LTE   G+D  +I +   +  D +       +   +P +D  I++   +       +  +
Sbjct: 134 LTEPHSGSDAMSIRTTAVEDGDALVINGTKHYISGAPFADFAIVMCVTDATATPPQITAV 193

Query: 262 LEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
           L D    G+  Q     + G       ++ F +         NV  G     ++ +  ++
Sbjct: 194 LVDLDLPGVSVQHEYVPMSGQH--IDADIRFVDVRVP---RENVFGGVGNGFRLGMSRIN 248

Query: 320 SAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +      +     +   ++ +AR R   GG +     ++  +AD+A  + A  ++  
Sbjct: 249 VNRLLHCPTMLGLAMSAYRASLDHARTRRQFGGPIARFQAIQHMLADMAAALWACESMIA 308

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                     + ++  A  R+ A   K +  +    V  +A++  G  G      + + +
Sbjct: 309 HT-------AALADAGADLRMTASACKLYVSERCFEVADKAVQIHGNVGVTRGHPVEQTF 361

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R+     IL G+       +   +
Sbjct: 362 RKLRMFRILTGTSEIQRNAIAKAI 385


>gi|94310752|ref|YP_583962.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93354604|gb|ABF08693.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus
           metallidurans CH34]
          Length = 391

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 120/366 (32%), Gaps = 35/366 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR----AARLYLMAQLEAGHLMSPSVTSA 159
             L   +   G++          +      +      A R +L A   A +   P   + 
Sbjct: 43  RRLQGLAREAGIYAPHLPPEHGGLGLDWQARAEILEEAGRSFLGAP--ALNCAPPDQPNM 100

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQ 217
             +           +               P+ +  +     +TE     G+D + + + 
Sbjct: 101 INLMRHGNAAQQARYL-------------QPLVQGRIRSCFAMTEPAPGAGSDPSMLRTT 147

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  DG + ++GHKWF+S    +   I+LA+ +   G       + D    G    R  
Sbjct: 148 ATRQ-DGKWVINGHKWFISGAVDAAFAIVLARTDEAAGT-GATMFIVDTDNPGYRLVRNI 205

Query: 277 NKI-GNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
             + G +     E+ F         +LG +       +       L   +  +     ++
Sbjct: 206 AGMDGYQVGGHGEIVFEQCVVDDDAVLGQVGQGFAYAQARLEPARLSHCMRFIGRASRAM 265

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  YA +R   G  L D   ++  +AD  +D+ A+  +    A   D  +S   ++A 
Sbjct: 266 EIAQQYAAQRESFGQRLADLQQVQAMVADSHIDLHASRLMVRDCARKMDAGESVKHDSAM 325

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                  TK +  +    V   A++ +G  G  ++  ++   RE     I  G+      
Sbjct: 326 -------TKIFVSEAVWRVADRAVQIMGALGISDDTPVSMIQRELRPFRIYDGASELHRA 378

Query: 453 DVLNLL 458
            +   +
Sbjct: 379 TLARRI 384


>gi|167568673|ref|ZP_02361547.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 582

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 138/428 (32%), Gaps = 63/428 (14%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM-AQLEAGHLMSPSV 156
           +FH  W                 +    P         +     LM A          + 
Sbjct: 78  DFHVLWPRFRDEWAGLLFDRHSAEAGDAPHADVPMVVKQVVFEMLMGANPSFMTYGGFTH 137

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
            +  ++ L  TP                   + P+ +         TE + G+D+ A+ +
Sbjct: 138 PACKLLTLHGTPGQKA--------------LRKPLLRYDWDACFCATEPQAGSDMTAVRT 183

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLLEDG 265
               + D +Y ++G K ++S+ M D      + +L ++         + C +VPR   + 
Sbjct: 184 VATPLGDDVYAVTGEKVYISAGMHDLTENTLYFVLGRIGSTALDSFSLSCLIVPRFWRND 243

Query: 266 SP-----NGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI 316
           +      N +    +  K+G    A   L F  +       L    NV    +  +    
Sbjct: 244 ATGKLESNHVECVAVPRKMGLNGCANTHLVFGRSGTTRAHLLGNRKNVGLLQLVPLMNQA 303

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIA 363
            + + +  +     +  +++ YARRR   G  +             ++   ++R + D+ 
Sbjct: 304 RMGTGLFGIGVASSAYLQSVSYARRRVQ-GRPIDSASDTAAPRVRIVEHGDVQRMLVDMK 362

Query: 364 LDIAAATALSFRLANSFDEAK-------SRSEEAAYARIM----APITKYWCCKMAPAVI 412
             +     L  +L  +   A        +   +   AR +     PI K +    A  + 
Sbjct: 363 ARVEGCRGLLGKLTAAATRATILEATPGADPADIERARKLQLLLTPICKAFISDQAWRIC 422

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFEQLF 469
             A++  GG GY +   + ++ R+    SI  G+      D++       +   L     
Sbjct: 423 ETAIQVHGGVGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRKPLLLRYFR 482

Query: 470 STLEQDLG 477
             L+  L 
Sbjct: 483 DALDASLA 490


>gi|163840870|ref|YP_001625275.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162954346|gb|ABY23861.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 408

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 134/422 (31%), Gaps = 35/422 (8%)

Query: 48  ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL- 106
              P+    E E L   V      EL               P  ++W        WH   
Sbjct: 18  KELPTADFFEFESLLSPVERAKLFELREFCAREV------TPFAQKW--------WHEED 63

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           + RS+   L        F     +    +    L                     + +  
Sbjct: 64  VPRSVFQKLSAMGVGAPFRAGYSRLYSGLATLELCKADLSTGAIFGIHHELFVEGIRIFG 123

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGI 225
           T    + +  +                  +  G  LTE   G+D+A  +T+  ++  DG 
Sbjct: 124 TEEQKQRFLQR-------------SSDGQILGGFALTEPEHGSDVAGGLTTMVRRDGDGW 170

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
                 +W  ++   D   + A+             + D S  G+   +++NKI  R   
Sbjct: 171 VLNGAKRWIGNAADGDYVFLWARDSDDGQIRG---FILDLSLPGISRTKIENKISMRGIK 227

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             +L   +        L+  +   +   + +   + +  M+      +   A  YA  R 
Sbjct: 228 NADLVMKDVRLAESDRLSTVSSFADTNVLLMGTRMMAGWMAAGVQCAAFEIARKYALERL 287

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  L    ++++ + ++  +  A+ A+S RLA   D A  R          A + K +
Sbjct: 288 QFGKPLAKFQLVQQQLVEMLGNATASLAMSARLAQVQD-AHDRGVGPELRMEQAALVKGF 346

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
             K+    +A+    +GG+G + +  +A+ + ++       G+     L V   +   + 
Sbjct: 347 TSKLCLDTVAKGRSLLGGNGIVTDFGMAKIFADAQPILTFEGTYEVNSLIVGRAITGHSA 406

Query: 464 LF 465
           L 
Sbjct: 407 LV 408


>gi|296394155|ref|YP_003659039.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296181302|gb|ADG98208.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 382

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 117/330 (35%), Gaps = 46/330 (13%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              L     +  +    + +A + TP   +      F  E+                + +
Sbjct: 74  WGDLGLTLTIPGNGLGNAAIAAVATPEQLEK-----FGGEW--------------AAMAI 114

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D AAI +      D  Y ++G K F ++   +   ++ A V+   G   +   
Sbjct: 115 TEPEAGSDSAAIKTTATLDGDE-YVINGEKIFATAGARAKNIVVWASVDPSAGRAAIKSF 173

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTGPVEDMKILI 316
           +      G+   R+++K+G +++ T  + F N            ++NV  G    M+   
Sbjct: 174 VVPRDTPGVKLVRVEHKLGIKASDTAAILFENVRVPKENLLGSPEVNVEKGFAGVMQTF- 232

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIA 367
             D+    V+   + +A A    + R +               +Q         +  D  
Sbjct: 233 --DNTRPIVAAQALGVARAALE-QLREILEKEGVEISYDKGAYNQQSAAADFLALEADWE 289

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  L+ + A   D  K  S+E       A I K    + A AV  +A+E  G  GY ++
Sbjct: 290 AAYLLTLKSAWLIDAKKPNSKE-------ASIAKAKAGRTATAVTLKAVELAGLYGYSQQ 342

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNL 457
             + +  R++    I  G+     L +   
Sbjct: 343 ALLEKWARDAKITDIYEGTQQIQQLIIARR 372


>gi|148254979|ref|YP_001239564.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146407152|gb|ABQ35658.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 388

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 124/362 (34%), Gaps = 28/362 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + DK    PA     +     G        ++          I  A + +    E
Sbjct: 25  DAYWLKKDKEGGFPA--DFHKALADAGWLGICIPEAYGGSGL----GILDAAIMMRTIAE 78

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           +G  MS +  +  M      P V         ++E        +   S      +TE   
Sbjct: 79  SGAGMSGAS-AIHMNVFGLNPVVV------FGTKEQCARMLPGIVDGSEKACFAVTEPNT 131

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G +   + ++  +  D         W  ++ +++  ++LA+       +     +     
Sbjct: 132 GLNTTQLKTRAVRKGDRYVVNGQKVWISTAQVAEKILLLARTTPLEEVKRPTHGLSLFYT 191

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           D   + +    ++ K+G +   + EL F +    +   LG+       +        +  
Sbjct: 192 DFDRSRIKVHEIE-KMGRKPVDSNELFFEDFEIPVEDRLGEEGRGFDYILHGMNPERILI 250

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V    ++L+ A  YAR R+V    +     ++  +A   +++ AA  +  +    +
Sbjct: 251 AAEAVGLGHLALSRASAYARTRNVFNRPIGQNQGIQHPLAKNWMELEAAWLMVLQAGWQY 310

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +    A  A+ +A    +  C+       +A+   GG GY  E  + R+ RES   
Sbjct: 311 DQGMACGPAANAAKYLAAEAGFHACE-------QAVMTHGGFGYAREYHVERYLRESLIP 363

Query: 441 SI 442
            I
Sbjct: 364 RI 365


>gi|111223280|ref|YP_714074.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111150812|emb|CAJ62516.1| putative Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 421

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 42/392 (10%)

Query: 83  QLHAYGPG-GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE-PVVRKQAHKIRAARL 140
           +L  +    G+R +  +  P   A  R    +GL    +   F   +             
Sbjct: 49  RLAPHAREIGQREESADSFP--WAAFRGLAEEGLFAVPFGDDFGRGLAYPMLGTCTVTEE 106

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
                     +               +P +     P++              +   A   
Sbjct: 107 IAYHSSSMAGVYDGQCILVPQTLTFASPALRARLVPELV-------------EGRTAFSF 153

Query: 201 GLTEKRGGTDIAA--ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258
             TE    +D+ A  + +   + +DG       +W  +S ++    +L +          
Sbjct: 154 ATTEPETSSDLTAARMQTVADRTADGFVVNGRKRWITNSVVAGWVSVLVRAGRSDRA--- 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318
             LL D S  G+       K+G+R   T ++ F++        L    G +     L  L
Sbjct: 211 TMLLVDLSSPGVRVGAPDLKMGHRGQLTADIVFTDVHVPADNVLGPPDGGL--GVALSAL 268

Query: 319 DSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               + +    V      L  A+H  R RHV G  L      +  +A  A +I  A +L 
Sbjct: 269 VRGRIGIGAAGVGVAQAALDLAVHRLRTRHVFGAPLGALQHWQFQMAQRATEIECARSLY 328

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY---IEERS- 429
            + A   D           A   A + K +  ++A  V+ EA++  G  G+   + E   
Sbjct: 329 QKAAILLDRGDRS------AEPEAAMAKAYGTRLANDVVREAIQIHGAVGFARRVAESGE 382

Query: 430 ---IARHYRESPANSILLGSGNAMVLDVLNLL 458
              +   YR++    I  G+       +   L
Sbjct: 383 SVRLEEMYRDAKILEIFEGANELQQWIIARQL 414


>gi|121599453|ref|YP_994234.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
 gi|124385253|ref|YP_001028113.1| protein aidB [Burkholderia mallei NCTC 10229]
 gi|121228263|gb|ABM50781.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1]
          Length = 261

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 6/209 (2%)

Query: 19  SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77
           + +    NQ P     NA+ +D+ LV  +  + +   +  L   G  + +     LA +A
Sbjct: 7   TATHRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLA 66

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           N + P+L  + P GER D +EFHP+WH LL R   +GLH   +        R  A   R 
Sbjct: 67  NRHAPELATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDP-----RPGAMAARC 121

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  +L AQLE+G L   ++T AS+  L   P +      K+++RE+D  +    QK S+ 
Sbjct: 122 AGYFLHAQLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMM 181

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           +G+G+TEK+GG+D+ +  +    +  G  
Sbjct: 182 VGMGMTEKQGGSDVRSNETHAYPLGAGRR 210


>gi|293608196|ref|ZP_06690499.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828769|gb|EFF87131.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 401

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  +  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTATKDGND-YILNGEKIFVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAENLLGNAEVDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------VMKRA 358
                 ++   D+    V+ M +  A+A   +  R      +             +    
Sbjct: 245 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYSTPYLHASN 295

Query: 359 IA----DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +A     +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 296 LAAQIYHMEAEWEAARLLMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 348

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 349 CVELAASVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 391


>gi|328958476|ref|YP_004375862.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
 gi|328674800|gb|AEB30846.1| glutaryl-CoA dehydrogenase [Carnobacterium sp. 17-4]
          Length = 406

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 78/422 (18%), Positives = 144/422 (34%), Gaps = 42/422 (9%)

Query: 45  ALIANFPSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA 102
            L   +PS +++    L  GE  +    +E   +     P L  Y      W+K EF   
Sbjct: 12  DLATFYPSDLYEYSSALTDGELTVLKELREALEINLR--PVLSEY------WEKAEFP-- 61

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
                 +     +  +          RK +      R + +A+L+A      +V      
Sbjct: 62  -FEAFEKIGKVRMMDNPLLFEGRESTRKPSELYNVFRYFELAKLDASIATFYTVHGGLFY 120

Query: 163 A---LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQG 218
           A           + WA K  S E                   LTE   G+DIA  + +  
Sbjct: 121 ATLLQGGNDEQIERWAEKTASYEIQG-------------CFALTEPEHGSDIAGGLATTA 167

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           +K  D        +W   +  +D   + A+ E       V   +  G   G+  Q+++ K
Sbjct: 168 RKEGDTWIINGEKRWIGGAGSADEIAVFARDEADGK---VKAFMVPGKAEGVHVQKIEGK 224

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAI 336
           I  R      +  ++        L       +   IL     D + ++      +   A+
Sbjct: 225 ISLRMTQNGHITLTDVKVGEDRRLQNVNSFKDVAGILRITRADISHLATGLTAGAFEAAL 284

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y ++R   G  L    +++  ++ +  ++ A  + S RLA   +E   R   ++ A++ 
Sbjct: 285 RYVKQREQFGKNLGSFQLVQEKLSIMQANVTANLSFSVRLAQMQEEGNYREVNSSMAKMH 344

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +            +A A E +GG+G   E  +AR + ++ A     G+     L V  
Sbjct: 345 NAL-------RMRETVALAREVVGGNGITLETDVARFFADAEAIYSYEGTHEINALIVGR 397

Query: 457 LL 458
            L
Sbjct: 398 YL 399


>gi|238482839|ref|XP_002372658.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|83765407|dbj|BAE55550.1| unnamed protein product [Aspergillus oryzae]
 gi|220700708|gb|EED57046.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 446

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 124/369 (33%), Gaps = 38/369 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQ 145
           +  D+ E  P           DG                    I  A + +       A 
Sbjct: 75  QECDQNERDP--KDFHAALAKDGWLGIALPEELGGAGL----GISEATMMMQTITQSGAG 128

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V +   +A   T +  K+  PKI +  +                 G+TE 
Sbjct: 129 MAGAQSIHANVYATQPLAKFGTNQQLKEIIPKIINGTWR-------------TCFGVTEP 175

Query: 206 RGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVP 259
             G +   + +   K  +   Y +SG K +++ + ++   I+LA+       +     + 
Sbjct: 176 NTGLETLKLKTLATKNPEKQTYSISGQKIWITCAQVASKMILLARTTPLEEVKKSSQGLS 235

Query: 260 RLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
               D   N  GL  +++K K+G R+    E+ F N       L+G  N     +     
Sbjct: 236 LFCIDLDRNKSGLDMRKIK-KMGGRAVDANEVFFDNYEIPESTLIGQENEGFKIILHGMN 294

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++     +L  A  YA  R V G  +     +   +AD  + + AA   ++
Sbjct: 295 AERCLLAGEALGLGYAALERAAQYASDRVVFGRPIGQNQGIAHPLADAYMQLEAAKLATY 354

Query: 375 RLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +D +K   S       +     KY   + A      A+   GG GY  E  + R+
Sbjct: 355 HAARLYDASKTDDSIPFHSVGVACNSAKYLAAEAAFKACERAVLSHGGMGYAMEYDVERY 414

Query: 434 YRESPANSI 442
            RE     I
Sbjct: 415 LRECLVPRI 423


>gi|120402903|ref|YP_952732.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955721|gb|ABM12726.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 408

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++   +   ++ A ++  
Sbjct: 132 KGVWAAMAITEPSFGSDSAAVSTTAVLDGDE-YVINGEKIFVTAGSRASHIVVWATLDKS 190

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   +      G+  +RL++K+G +++ T  + F N        L      VE  
Sbjct: 191 KGRAAIKSFIVPREHPGVTVERLEHKLGIKASDTAVIRFDNARIPKDNLLGDPEIHVEKG 250

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADI 362
              ++   D+    V+ M V +A A     R+ ++              Q         +
Sbjct: 251 FAGVMETFDNTRPIVAAMAVGVARAALEDLRKILTDAGIEISYDKPAHAQSAAAAEFLRM 310

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +  +   L+ R A   D     S+EA+  +  A        ++A  +  +A+E  G +
Sbjct: 311 EAEWESGYLLTVRSAWQADNRIPNSKEASMGKAKAA-------RVASDITLKAVEMAGTT 363

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY EE  + +  R+S    I  G+     L V   L
Sbjct: 364 GYSEETLLEKWARDSKILDIFEGTQQIQQLVVARRL 399


>gi|312141462|ref|YP_004008798.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311890801|emb|CBH50120.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 404

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 33/358 (9%)

Query: 105 ALLRRSIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            +   +   GL    +  +     +       +  A  Y +    A ++ +P   +  ++
Sbjct: 48  EMQAEAKGRGLLAPHAPVEFGGLGLNMSDRSPVFEAAGYSLFGPTALNIAAPDEANVHLL 107

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQK 220
           A + +P   +++               P+ +  V     +TE     G+D +A+T++ +K
Sbjct: 108 AHVASPAQKEEFL-------------GPLARGEVRSAFAMTEPAPGAGSDPSALTTRAEK 154

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNK 278
              G + ++GHKWF++    +  FI++A+  G  G        L   S  G+   R  + 
Sbjct: 155 APGG-WKINGHKWFITGADGAGFFIVMARTSGAPGDRGGATMFLAPASAPGIRVGRHIDT 213

Query: 279 IGNRSN--ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           + +R+      E+ F + F     +LG ++      +       +   +  +   R    
Sbjct: 214 L-DRAMIGGHCEVFFEDLFVPDDAVLGAVDEGFAYAQVRLGPARMTHVMRWLGAARRGHD 272

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ Y  RR   G  L D  ++++ +AD  +DIAA  AL  R     D+  +       A
Sbjct: 273 VAVDYVARRDGFGSRLGDLGMVQQMVADNEIDIAATRALLTRACWELDQGGT-------A 325

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                I K +  +    ++  +++  GG G   +  +AR  RE     +  G      
Sbjct: 326 SDSTSIAKTFGAEAIFRIVDRSIQMCGGMGVSGDLPLARLSREVRPFRVYDGPSEVHR 383


>gi|311106362|ref|YP_003979215.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8]
 gi|310761051|gb|ADP16500.1| acyl-CoA dehydrogenase, N-terminal domain protein 9 [Achromobacter
           xylosoxidans A8]
          Length = 383

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 134/370 (36%), Gaps = 37/370 (10%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL-EAGHLM 152
            ++         + R+    GL       +   V       + A           A  + 
Sbjct: 29  VERAHSDDYPWDVARKMASQGLLGITIAEADGGVGGSLMDAVIAIETVASVCPRSADVVQ 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
           + +  +  ++A   +    + +   + + E               I +G+TE   G+ + 
Sbjct: 89  AGNFGAIRVLAEYGSSLQKQKYLSALLAGE-------------GLISVGMTEPDAGSAVT 135

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +   + +DG + ++G K F +     + ++L  V    G   +  +L D    G+  
Sbjct: 136 ELKTSATR-ADGGWRINGTKIFTTHGPHAS-VILTYVRFGPGTGGIGSVLIDTKAQGV-- 191

Query: 273 QRLKNKIGNRSNAT-----VELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSV 325
                K+G RS        VE+ F N F      +    G  +      +  + +   S+
Sbjct: 192 -----KLGKRSAFMSGEEWVEIFFDNVFVADDMVVLGEGGFKKQIAGFNVERIGNTARSL 246

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +  R +  EA ++A +R   G +L +   ++   AD+ + + AA  L +R A++ D    
Sbjct: 247 ALGRYAYEEARNWAMQRKQFGRLLCEFQGLQWKFADMRIKLDAAQLLLYRAASAADTGFP 306

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
            + E         I K +C ++   V  +A++ +GG GY  E  +    R      I  G
Sbjct: 307 SATE-------TAIAKAYCNQVGFDVANDALQVLGGLGYSRESLVEYCVRRCRGWMIAGG 359

Query: 446 SGNAMVLDVL 455
           S   +   + 
Sbjct: 360 SIEILKNRIA 369


>gi|294650321|ref|ZP_06727688.1| butyryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823734|gb|EFF82570.1| butyryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
          Length = 348

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 106/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 73  KGTWAAMAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGERADSVVVWATLDKK 131

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 132 LGRAAIKSFVVTKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAANLLGNPDIDVAKG 191

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 192 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYQTPYLQSSN 242

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA     +     D  K  S+E       A I K    ++   +  +
Sbjct: 243 LAAQIYRMEAEWEAARLPMLKATWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 295

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 296 CVELAASVGYGEDELLEKWARDSKILDIFEGTQQIQQLIIARR 338


>gi|172064812|ref|YP_001815524.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
 gi|171997054|gb|ACB67971.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
          Length = 1272

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 81/425 (19%), Positives = 151/425 (35%), Gaps = 45/425 (10%)

Query: 114  GLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            GL     DRS   +   Q   +R  A+L  +    A  +   +      +     P + +
Sbjct: 660  GLLGMPIDRSHGGLGLGQRDMLRVFAQLAAIDSTLAFFVALNNTLGILPIMQHAQPPLRE 719

Query: 173  DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  P + S               +     +TE   G+ + AI S+ Q+   G + ++G+K
Sbjct: 720  ELLPSLASG-------------RMLAAFAITEPAAGSHVRAIASRAQRTGSGDWLVTGNK 766

Query: 233  WFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +  SS  +    + A+     G   +          G+     +  +G R      L  
Sbjct: 767  RWSGSSAWAGIINVFARQADGTGMVGLA---VRPGTPGVRIGAEELTMGVRGMIQNSLHL 823

Query: 292  SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                    + LGD+       +    +  L  A + V GM+        Y  RR V  G+
Sbjct: 824  DRARISDAYRLGDIGQGMLVAQHAMNIARLGIAAVCVGGMKRCAQLMHRYGGRRQVGTGL 883

Query: 349  LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
            L+D P+ +  + ++   I    AL   LA   D   +  E+         I+K    ++ 
Sbjct: 884  LLDNPLSRLRLGELRDRIDGLNALVEHLATELDLGVALPEDCLL------ISKILGSELL 937

Query: 409  PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
                 E M+ +GG GYIE     + +R++    I  G    +++ + + L  G++    L
Sbjct: 938  SQSADEMMQFLGGRGYIETNLAPQIFRDARLTRIFEGPTETLLVHLGSRLLNGSD---DL 994

Query: 469  FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI-AD 527
               LE  L  S   +   LR+  +   +D              ++A+ L       + A+
Sbjct: 995  LRYLESAL--SAGALARELRELGAQLAQDG------------LANASKLDGTAHAAVWAN 1040

Query: 528  VFLEN 532
             +L  
Sbjct: 1041 YWLGT 1045


>gi|221488678|gb|EEE26892.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii GT1]
          Length = 454

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 123/367 (33%), Gaps = 27/367 (7%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           +++  F      + ++    GL    +      +   +A  +      + A     +L+ 
Sbjct: 106 YEEAAFDSELVEICKKFGPAGLQIKGY--GCPGLTHTEAILMAMEMARVDASFSTFYLVH 163

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
             + +   +A+  T      W PK             M +       GLTE   G+D   
Sbjct: 164 CGL-AMQSIAVAGTQEQKAMWLPK-------------MSRLECIGSFGLTEPNHGSDATG 209

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273
           + +  +K+  G       +W  ++  SD  ++ A+    V    +   + +    G    
Sbjct: 210 LRTSAKKVEGGWILNGQKRWIGNATFSDIVVVWAR---DVHSEKILGFIVEKDFPGFSAT 266

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331
           +++NK+  R     ++   + F      L          ++L       A   V  +  +
Sbjct: 267 KIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGFSGATAQVLESSRAVVAAECVGVLLGA 326

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ Y   R   G  L    +++  +  +   +     L  RL    DE K       
Sbjct: 327 YDNALKYCTERKQFGRELATFQLVQERLMRVLGMLQGVLLLVLRLGRLMDEGKPHMMA-- 384

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K  C ++A   IA   E +GG+G + +  +A+ + +  A     G+ +  +
Sbjct: 385 ----HIALAKATCSRVAREGIALCREVLGGNGIVTDFGVAKFHADIEALYTYEGTYDINM 440

Query: 452 LDVLNLL 458
           L     +
Sbjct: 441 LIAGRAV 447


>gi|327350526|gb|EGE79383.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 435

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 21/339 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
               L    W     P     +    +    +M  +          +S  M      P V
Sbjct: 88  FQAALAKDGWLGVCMPTEFGGSQLGISEAAVMMQTISESGAGMSGASSVHMNIFGLEPVV 147

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  + E       P+ +        +TE   G D   + S   +  D       
Sbjct: 148 ------RFGNAEQKQRFLIPLIQGRERACFAVTEPNTGLDTLKLRSMATRDGDHYILRGS 201

Query: 231 HKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             W  ++  ++  ++L +             +     D   + +    +  K+G  +  T
Sbjct: 202 KIWISTAQHAEKILILVRTTQLDKVTKPSQGLSLFYTDLDRSQVDVSEIP-KMGRAAVDT 260

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L F N       ++G+ N     +        +  A  ++     +L  A  YA  R 
Sbjct: 261 NTLFFENWKVPAADMIGEENNGFKMIMHGMNAERILIAAEALGLGYAALRRAAIYANERQ 320

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  +     ++  +AD  +++ AA  + ++ A  +D   +  E A  A+ +A    + 
Sbjct: 321 VFGRSIGQNQGIQHPLADSWMNLEAARLMVYQAARMYDAGYTSGEYANAAKYLAAEAAFR 380

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            C+ A       +   GG GY  E  + R+ RE+    I
Sbjct: 381 ACERA-------VMSHGGMGYAREYHVERYLREAFIPRI 412


>gi|41409294|ref|NP_962130.1| FadE12_3 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398114|gb|AAS05744.1| FadE12_3 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 412

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 115/357 (32%), Gaps = 26/357 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            +  GL  S+  R    V      +  A + L L   L+    +  +     M+    T 
Sbjct: 72  WLRYGLPASLGGRDGSNVDMAVIREHLAHKGLGLHNDLQNESSIVGNFPQVIMMERFGTD 131

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              ++W+  + + E              ++  GLTE + G+D   + ++ ++  DG + +
Sbjct: 132 EQRREWSQALITGE-------------RSMAFGLTEPQHGSDATWLQTRAERDGDG-WVI 177

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F +        ++ A+  G  G    +   L      G           N     
Sbjct: 178 NGAKRFNTGVHRATHDLIFARTSGEPGAAVGITAFLVPTEAPGFTVPYYWWTF-NMPTDH 236

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+E ++       +LG+++      +       +  A  S+   +  +  A  YA  R 
Sbjct: 237 GEVELTDVRVPADAVLGEVDRGLEVAQTFLHENRIRQAASSLGAAQYCIDRAAEYAGSRT 296

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  L     ++  +A++  +      L    A   D                 +  Y 
Sbjct: 297 VFGKPLSVNQAVQWPLAELQTEAQMVRLLVQYAAWHLDRDHHME-----VSDKVSMANYR 351

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++       AM+  GG GY         YR      I  G+    +  V   L K
Sbjct: 352 ANRLVCDAADRAMQIFGGLGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFK 408


>gi|27378058|ref|NP_769587.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27351204|dbj|BAC48212.1| blr2947 [Bradyrhizobium japonicum USDA 110]
          Length = 445

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/442 (14%), Positives = 133/442 (30%), Gaps = 49/442 (11%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S  + LVA +      + +E++ L        A +  R  ++           G     
Sbjct: 24  FSLPTDLVAYLGELDRFIEREIKPL------EAADDNIRFFDHRREWARTDFENGGLPRH 77

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQL 146
            W+ +            +   G       + +                  A  L L   L
Sbjct: 78  EWEALL-----RKAKDLADAAGHLRFPVPKQYGGKDGSNLWMAVIREHFAAKGLGLHNDL 132

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +    +M+               +              K    I  GLTE  
Sbjct: 133 QNEHSIVGNFPVVTMLDRYGRDDQKA-----MIDG---------SIKGKYRITFGLTEPH 178

Query: 207 GGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++    +      + ++G K + +         + A+  G  G    +   
Sbjct: 179 HGSDATHMETRAVPATRDNVKGWIINGEKMWTTGMHVATHCALFARTSGNDGDARGITCF 238

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVE--LEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
           L     +G+   +++  +   +  T    + F++ F     L G++       +      
Sbjct: 239 LVPAKSHGV---KVEEYMWTFNMPTDHPRVSFTDVFVPEDALFGEVGRGLSLAQCFVHQN 295

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +  A  S+      + E++ YAR R   G  L +   ++  + ++A        L  + 
Sbjct: 296 RIRQAASSLGAAGYCINESVKYARERKPFGKALAENQAIQFPLVELATQAEMLRLLIRKT 355

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+      E   +     +  YW  ++       AM+  GG GY   +     YR 
Sbjct: 356 AWEMDKLTEEQIERTLSDR-VSMCNYWANRLCCESADRAMQVHGGMGYSRHKPFEHIYRH 414

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  GS    +  V   L
Sbjct: 415 HRRYRITEGSEEIQMRKVAGFL 436


>gi|32563615|ref|NP_871794.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis
           elegans]
 gi|26251617|gb|AAN84837.1| Acyl coa dehydrogenase protein 1, isoform b, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 252

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 23/201 (11%)

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M+    T      + P++ S                     ++E   G+D  A+ +  ++
Sbjct: 47  MIIDYGTEEQKLKYLPRLCS--------------DSLASFCISESGAGSDAFALKTIAKR 92

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D         W  +S  +  F++ A  +       +   + + S +GL   + ++K+G
Sbjct: 93  DGDHFLISGTKMWITNSGEAQVFVVFANADPSQKYKGITCFIVERSADGLTVDKEEDKLG 152

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAI--- 336
            R+++T ++ F N          +     +  K  I  L++  +++    + LA+     
Sbjct: 153 IRASSTCQVHFDNVRVHKSA---ILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQ 209

Query: 337 --HYARRRHVSGGILIDQPVM 355
              Y ++R   G  LID  V+
Sbjct: 210 TIPYLQQREQFGQRLIDFQVI 230


>gi|241761027|ref|ZP_04759116.1| acyl-CoA dehydrogenase domain protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374646|gb|EER64107.1| acyl-CoA dehydrogenase domain protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 392

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 121/362 (33%), Gaps = 46/362 (12%)

Query: 103 WHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W  L R S             G   ++    F       +    A    +          
Sbjct: 32  WRKLDRESAYPTEFVKTLSDAGYLAALIPEEFGGSGLPLSAGA-AILEEIQHCGGNAGAC 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     +         K + PKI S E                  G+TE   GTD  
Sbjct: 91  HAQMYIMGALLRHGNDEQKKKYLPKIASGELR------------LQAFGVTEPTSGTDTT 138

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDG-- 265
           ++ +  +K  D  Y ++G K + S +  SD  ++LA+             +   L D   
Sbjct: 139 SLKTFAEKKGD-KYIVNGQKIWTSRAEHSDLMLLLARTTPKDQVEKKTDGLSVFLVDMRK 197

Query: 266 --SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
             +  G+  + ++  + N S  T E+ F N       L+G+       +        +  
Sbjct: 198 ALADGGMTIRPIRAMM-NHS--TTEVFFDNMEIPAENLVGEEGKGFRYILSGMNAERVLI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +  + +A  Y+  R V G  +     ++  IA     + AA  + +  A+ F
Sbjct: 255 ASECIGDAKWFIEKARDYSSERVVFGRPIGANQGIQFPIARAYAQMRAAELMVYHAAHLF 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ +    EA  A++++            A     ++ +GG  + EE  + R +RE+   
Sbjct: 315 EQGERAGAEANMAKMLSAEAS-------WAAAEACVQTLGGFAFAEEYDVERKFRETRLY 367

Query: 441 SI 442
            +
Sbjct: 368 QV 369


>gi|239814319|ref|YP_002943229.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239800896|gb|ACS17963.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 387

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 114/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +PA    +      G   ++  + +         +       +         
Sbjct: 29  RKIDEARGYPA--EFVDALTKAGWMAALIPQEYGGSGLGLT-EASVIMEEINRSGGNSGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    +++ P+I + E                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSEAQKRNYLPRIATGELR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   K  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TRIKTTAVKKGDRYVVNGQKVWISRIQHSDLMILLARTTPLAEVKKKSEGMSIFIVDLRE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+  + + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGQGMTVRPILN-MVNH--ETNELFFENLEIPAENLIGEEGQGFKYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   Y + R V G  +     ++  IA+  ++I AA  + +     FD
Sbjct: 251 AECIGDGYWFIDKVTAYTKERVVFGRPIGQNQGVQFPIAEAFIEIEAANLMRYEACRLFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+ +A    +             ++  GG G+  E  I R +RE+    
Sbjct: 311 AREPCGAQANMAKYLAAKASW-------EAANACLQFHGGFGFACEYDIERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|56551381|ref|YP_162220.1| acyl-CoA dehydrogenase domain-containing protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|260753007|ref|YP_003225900.1| acyl-CoA dehydrogenase domain protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56542955|gb|AAV89109.1| acyl-CoA dehydrogenase domain protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552370|gb|ACV75316.1| acyl-CoA dehydrogenase domain protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 392

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 121/362 (33%), Gaps = 46/362 (12%)

Query: 103 WHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W  L R S             G   ++    F       +    A    +          
Sbjct: 32  WRKLDRESAYPTEFVKTLSDAGYLAALIPEEFGGSGLPLSAGA-AILEEIQHCGGNAGAC 90

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     +         K + PKI S E                  G+TE   GTD  
Sbjct: 91  HAQMYIMGALLRHGNDEQKKKYLPKIASGELR------------LQAFGVTEPTSGTDTT 138

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDG-- 265
           ++ +  +K  D  Y ++G K + S +  SD  ++LA+             +   L D   
Sbjct: 139 SLKTFAEKKGD-KYIVNGQKIWTSRAEHSDLMLLLARTTPKDQVEKKTDGLSVFLVDMRK 197

Query: 266 --SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
             +  G+  + ++  + N S  T E+ F N       L+G+       +        +  
Sbjct: 198 ALADGGMTIRPIRAMM-NHS--TTEVFFDNMEIPAENLVGEEGKGFRYILSGMNAERVLI 254

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   +  + +A  Y+  R V G  +     ++  IA     + AA  + +  A+ F
Sbjct: 255 ASECIGDAKWFIEKARDYSSERVVFGRPIGANQGIQFPIARAYAQMRAAELMVYHAAHLF 314

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++ +    EA  A+++A            A     ++ +GG  + EE  + R +RE+   
Sbjct: 315 EQGERAGAEANMAKMLAAEAS-------WAAAEACVQTLGGFAFAEEYDVERKFRETRLY 367

Query: 441 SI 442
            +
Sbjct: 368 QV 369


>gi|262368203|ref|ZP_06061532.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
 gi|262315881|gb|EEY96919.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046]
          Length = 399

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 106/271 (39%), Gaps = 18/271 (6%)

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
              + +TE   G+D AAI +   K     Y L+G K F++S   +DA ++ A ++ ++G 
Sbjct: 127 WAAMAITEPNCGSDSAAIRTTAIKDGKD-YILNGEKIFVTSGERADAIVVWATLDKKLGR 185

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-- 313
             +   +      G+  +RL++K+G +++ T  +   +        L  +   +      
Sbjct: 186 SAIKSFVIPKGTAGMKVERLEHKLGIKASDTAVIRLIDCRVPANNLLGNAVIDIAKGFAG 245

Query: 314 ILIYLDSAIMSVSGMRVSLAEA-IHYARR------RHVSGGILIDQPVMKRAIADIALDI 366
           ++   D+    V+ M +  A+A +   +               +    +   I  +  + 
Sbjct: 246 VMETFDNTRPLVAAMAIGCAKASLERIKEIFSDCLDPQYITPYLQTTHIVNQIYRMEAEW 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L+ + A   D  K  S+E       A I+K    ++   +  + +E     GY E
Sbjct: 306 EAARLLTLKAAWMADNKKPNSKE-------ASISKAKAGRICNEITLKCVELASTVGYNE 358

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +  + +  R+S    I  G+     L +   
Sbjct: 359 DELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|297563638|ref|YP_003682612.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848086|gb|ADH70106.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 381

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 53/373 (14%), Positives = 109/373 (29%), Gaps = 19/373 (5%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
               G    +    P      R +   GL  +    S             A      A  
Sbjct: 21  RDRLGGAPPREHDQPLTREEWRTAAEAGLTGACLPASVGGGGLGALDTALALEALGSACP 80

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +A       +  A    L+       ++                M    +  G   TE+ 
Sbjct: 81  DA------GLPFAVAAHLLACGVPMSEFG----RGPEVTDLLRGMAGGELVAGNAATEEG 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+ A+ +  +    G        +  ++  +D  +  A  +   G F V        
Sbjct: 131 AGSDVNAMATTARPEDGGYVLDGTKSFVSNAAEADVLVAYAVTDPSAGFFGVTAFAVPRG 190

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA---IM 323
             G+       K G  + A   + FS         L          +  +  + A    +
Sbjct: 191 TAGVTVGPTLRKAGLHACAAAPVTFSGCRVPASLRLGAEGQGNAVFQFSMAWERACLPAI 250

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +  M   +     + R R   G  + +   +   +A +   +  A  L +R     D A
Sbjct: 251 YLGAMEDQMGRVAAHVRGRRQFGRPISEFQAVSHRVAAMRQRLEGARLLLYRACWLLDRA 310

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  ++ A        + K    + A A   +A++  G SGY+    + +  R++   +++
Sbjct: 311 RPEADTA------VSLAKVAVTEAAVANGLDAVQLFGSSGYLVGTGMEQRLRDALPGTLV 364

Query: 444 LGSGNAMVLDVLN 456
            G+       +  
Sbjct: 365 SGTSEIQREIIAR 377


>gi|326482943|gb|EGE06953.1| hypothetical protein TEQG_06006 [Trichophyton equinum CBS 127.97]
          Length = 439

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 125/365 (34%), Gaps = 29/365 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLE 147
             ER D+ E +P  H L      DG        S        +      +      A L 
Sbjct: 69  WAER-DRTEEYP--HELHAALSKDGWIGIALPESLGGAGLGISEATMMLQTIAQSGAGLA 125

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +V +   VA   +    K   P++ + E+                 G+TE   
Sbjct: 126 GAQSIHANVYATQPVAKFASEEQKKRMLPRLIAGEWR-------------TCFGVTEPNT 172

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G +   + +   K  D     S H W  S+ ++   I+LA+             +     
Sbjct: 173 GLETLKLRTVAVKDGDSYRLTSEHSWISSAQVAQKMILLARTTPVEEVNKPSEGLSLFFI 232

Query: 264 DGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D      GL  +++K K+G RS    E+ F         L+G+       V         
Sbjct: 233 DFDRAAPGLDLRKIK-KMGGRSVDANEVFFDEYRIPADSLIGNEGEGFKIVLHGMNAERC 291

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    V+L +A  YA+ R V G  +     +   +A   + + AA   ++    
Sbjct: 292 LLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQAIAHPLAAAYMSLEAAKLATYHATK 351

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +DE+++ S        +     KY   + A A    A+  +GG GY +E  + R+ RE 
Sbjct: 352 LYDESRNDSSITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGMGYAQEYHVERYLREC 411

Query: 438 PANSI 442
               I
Sbjct: 412 FVPRI 416


>gi|281203495|gb|EFA77695.1| putative acyl-CoA oxidase [Polysphondylium pallidum PN500]
          Length = 421

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 122/316 (38%), Gaps = 29/316 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A         S   +    + +  + + PK+ S E                  GLTE   
Sbjct: 120 ATFFGILQTISMLPIYYCGSEKQKQYYLPKMASME-------------KIGAFGLTEPNA 166

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D A +  + ++ SDG + L+G K ++ ++P +D  I+ A+        L+   + + +
Sbjct: 167 GSDAAGLFCEAKQNSDGTWTLNGEKRWIGNAPFADVVIIWARNTD---TKLINGFVIEKN 223

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGPVEDMKILIYLDSAI 322
             G+  + + NKI  R      +   N        L +     +GP + +  L  + ++ 
Sbjct: 224 TPGMTVETINNKIALRMVQNGHIYLKNCILSDENRLPLAKDFGSGPGKSLF-LTRIVASW 282

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           +++     +    I Y + R   G  L    +++  +  +   I + + ++ R+++ FD+
Sbjct: 283 IALGIACSAYESCIKYVKERKQFGQSLAKYQLVQERLVKMLGIIQSMSLMTLRISHLFDQ 342

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K              + K         V++ A E +GG+G + +  +AR + +  A   
Sbjct: 343 NK-------LTYGQVGLLKAHNTSHGRQVVSMARELLGGNGIVTDFGVARSFVDMEAVHT 395

Query: 443 LLGSGNAMVLDVLNLL 458
             G+ +   L     +
Sbjct: 396 FEGTYDINTLITGREI 411


>gi|67900666|ref|XP_680589.1| hypothetical protein AN7320.2 [Aspergillus nidulans FGSC A4]
 gi|40742181|gb|EAA61371.1| hypothetical protein AN7320.2 [Aspergillus nidulans FGSC A4]
 gi|259483327|tpe|CBF78623.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 476

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 78/455 (17%), Positives = 143/455 (31%), Gaps = 67/455 (14%)

Query: 29  PLFIGMNAY--SSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86
           P     N Y  S+   L A + N+   V   +           AQE              
Sbjct: 59  PQLAIPNPYYTSTHHALRAWVRNY---VDTHIAPY--------AQEWEEAGEIPPHVYKT 107

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           +   G         P        ++  G+    WD     +V  + +++    +      
Sbjct: 108 HCEHGFAIVHPLTTPE--DSANLTLPGGVKREEWDTWCGLIVADELNRLGFVGV------ 159

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               L   +      +A   T    + W PK+              K  +   LG+TE  
Sbjct: 160 -IWGLGGGNSIGCPPIARFGTAEQRRRWLPKV-------------AKGEIRFCLGITEPD 205

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
            G+D+A I +   +  +        KW +++ +   +   A   G  G   +  L+    
Sbjct: 206 AGSDVANIRTTAVRQGEYYVVNGSKKW-ITNGIWADYCTAAVRTGGPGRGGISLLVIPLK 264

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G+  +R+ N  G  ++                                 L  A  S+ 
Sbjct: 265 AEGVTRRRMHNS-GVNASD---------------------------FNPERLSLACASLR 296

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             RV   +A +YA +R   G  LI +  ++  I    L I  A A   +L N  ++ K+ 
Sbjct: 297 LARVCAEDAFNYATQRSTFGAPLITRQAIQAKIFKFGLLIEPAYAFMEQLVNILEKTKNE 356

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSIL 443
             +      M  + K    +     + EA + +GG+GY        I +  R++  + + 
Sbjct: 357 PRDDVRIGGMTALLKVMSTRALEKSVREAQQILGGAGYNRAGKGARIEQISRDARVHVVG 416

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
            GS   M+   L    K     ++     +  +G 
Sbjct: 417 GGSEEIMMGLALQEEMKALTTRKRALERKKNLVGD 451


>gi|212637617|ref|YP_002314142.1| crotonobetainyl-CoA dehydrogenase [Shewanella piezotolerans WP3]
 gi|212559101|gb|ACJ31555.1| Crotonobetaine reductase subunit II, FAD-binding [Shewanella
           piezotolerans WP3]
          Length = 378

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 12/284 (4%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E      A            +TE   G+D+ ++ +  ++  DG   L+G K F++S  
Sbjct: 101 SPEQIDKIMALRGTGKQMWNSAITEPSAGSDVGSLLTTYKRR-DGKVYLTGSKCFITSAA 159

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              +I++   +      +      D S   +   +L  K+G + ++  EL+F        
Sbjct: 160 GTPYIVVMAKDAESEKPIFTEWFIDMSKPSIKMSKLP-KLGLKMDSCCELQFDEFELEES 218

Query: 300 GDLNVSTGPVEDMKIL---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
               +       +K          A+ +      +  +A  YA +R   G  +    +++
Sbjct: 219 DMFGIEGNGFMRVKEEFDSERFLVALTNYGAAYCAFEDAAKYANQRVQFGEAIGRFQLIQ 278

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
              A +A+ + +   + +  A   D     S ++A         K++C      VI  AM
Sbjct: 279 DKFAHMAIKLNSMKNMVYEAAWKCDNGTMTSGDSAM-------CKFYCANAGFEVIDSAM 331

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           + +GG     E  I+R +R+   + +  GS    +L +   + K
Sbjct: 332 QVLGGYAIAGEHRISRMWRDIRVDRVSGGSDEMQILTLGREVLK 375


>gi|313224234|emb|CBY20023.1| unnamed protein product [Oikopleura dioica]
          Length = 455

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 104/308 (33%), Gaps = 44/308 (14%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
             +    T      + P I   E             +   L +TE   G+D+  I +   
Sbjct: 183 PYICSYGTDEQVDRYVPGIRDGE-------------IISCLCMTEPGSGSDVQGIKTNAV 229

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLK 276
           +  D  + L+G K F+S   M+D  I++A  +  V    + +   L D +  G    +L 
Sbjct: 230 RDGDD-WILNGSKVFISCGYMADMAIVVAVTDKNVSKAAYGISLFLVDTNLPGFEKGKLL 288

Query: 277 NKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
            KIG  S  T EL F++        L G+  V+ G    M  L    L  A+   + +  
Sbjct: 289 KKIGRASADTAELFFNDVRLPGNAVLGGEEGVNRGFQFLMHDLGRERLLVAMGCTAQLEK 348

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
                  Y+        I+       RAI D  ++  A                      
Sbjct: 349 GFELTRQYSSF-SPFISIIFTIEKNLRAITDKHIEAYA--------------------NG 387

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
              +    + KY+  +       +  +  GG GY+ E  IA+ +  +   SI  G+   M
Sbjct: 388 DLDQQSVSMLKYYVSEKMIENTTKLQQLWGGYGYMLEYPIAQIFAGARVESIYAGTTEIM 447

Query: 451 VLDVLNLL 458
              +   L
Sbjct: 448 KELIARTL 455


>gi|159039350|ref|YP_001538603.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157918185|gb|ABV99612.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
           CNS-205]
          Length = 667

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 132/364 (36%), Gaps = 33/364 (9%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWA 175
            +I D  F+ + R  A  ++    Y    L   H     + + S+  A+      H+   
Sbjct: 109 AAIPDEVFQGLSRLGAFGMKIDPSYGGLGLSNLHYCRALMLAGSVSPAIGALLSAHQSIG 168

Query: 176 P----KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
                K+F          P           LTE   G+D A + +  +   DG  Y L+G
Sbjct: 169 VPQPLKMFGTAAQKQRFLPRLAAGAVSAFLLTEPDVGSDPARLATTAEPTPDGTGYRLNG 228

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  +  ++   +++A+V    G    +   + +    G+  +R    +G R     +
Sbjct: 229 VKLWATNGTVATLLVVMARVPASAGRRGGITAFVVESDTEGITVERRNAFLGLRGLENSQ 288

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-----VSGMRVSLAEAIHYARRR 342
             F + F     + NV  G  + +KI L  L++  +S     V   + +L  A  ++  R
Sbjct: 289 TRFHDVFVP---NENVIGGEGKGLKIALTTLNTGRLSLPAMCVGAGKWALNVAREWSAER 345

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  + D   + + +A IA        +        D+ ++         I A + K 
Sbjct: 346 VQWGRSVGDHEAVAQKLAFIAATTYGMETMLDLCCLLADDDRNDIR------IEAALVKL 399

Query: 403 WCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNAMVL 452
           +  +MA  V+ E ++  GG GY   E           + +  R+   N I  GS   M L
Sbjct: 400 YASEMAWRVVDELLQIRGGRGYETAESLRARGERPAEVEQLLRDLRINRIFEGSTEIMHL 459

Query: 453 DVLN 456
            +  
Sbjct: 460 LIAR 463


>gi|149927563|ref|ZP_01915816.1| Probable Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
 gi|149823617|gb|EDM82845.1| Probable Acyl-CoA dehydrogenase [Limnobacter sp. MED105]
          Length = 389

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/374 (18%), Positives = 137/374 (36%), Gaps = 46/374 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL----YLMAQLEAGHLMSPSVTSAS 160
            L+  +   GL       S E   R  +H  +A       Y      A ++ +P   +  
Sbjct: 45  ELVGLAREAGL--LTPHASTELGGRGWSHIEKAIAFEEAGYSTLGPTAMNIHAPDEGNIH 102

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQG 218
           ++ ++ TP   + W               PM +  +     +TE     G D + + +  
Sbjct: 103 LLEVVATPEQKERWLK-------------PMVQGKIRSCFAMTEPAPGAGADPSMMQTTA 149

Query: 219 QKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
            K  D  Y ++G KWF++     +F I++A++E           L D    G+ Y R  +
Sbjct: 150 VKDRDH-YVINGDKWFITGAEGASFAIIMAKMEDGTA----TMFLSDMDAPGIEYVRTMD 204

Query: 278 KI-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +     G        L F+N       +LG++       +       L   +  +   R
Sbjct: 205 AMDACFTGGHG----VLRFNNLRVHESSVLGEIGKGFRYAQVRLAPARLTHCMRWLGQAR 260

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+ YAR+R   G  L     +   +AD  +D+  A    +  A   D+ +  + E
Sbjct: 261 RTHDIALDYARKRQAFGVQLGAHEGVSFMLADNEMDLHTARLHIWHTAWMLDQGERCNFE 320

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           ++ A+++    ++        V+  +++ +GG G   E  ++R + +  A  I  G    
Sbjct: 321 SSRAKVVCSEAEW-------RVVDRSVQILGGQGVTGETIVSRIFTDMRAFRIYDGPSEV 373

Query: 450 MVLDVLNLLEKGTN 463
               +   L  G +
Sbjct: 374 HRFSMGKKLIAGLD 387


>gi|119477600|ref|ZP_01617750.1| CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
 gi|119449103|gb|EAW30343.1| CoA dehydrogenase [marine gamma proteobacterium HTCC2143]
          Length = 390

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 125/365 (34%), Gaps = 37/365 (10%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA----SMVAL 164
           R    G+     D  +    R        A +  +A+     L  P +  A      ++ 
Sbjct: 46  RLAETGICGITIDEEYGGSGRDL--VAAVAIIDELARHGGAALAGPFIHCAFYGGMNISE 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD- 223
             + R  K+  PK+ + E             + +  GL+E   G D+AA+ +      D 
Sbjct: 104 NGSERQKKELLPKLAAGE-------------ILMAYGLSEPNVGGDLAAVETIATLSDDK 150

Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
               ++G K + +    +D  I L +          +   +      G+    L + IG 
Sbjct: 151 STVIINGTKRWCTGARFADYMICLVRSGAADAKYKNLSMAIVPLDTPGIEIFDLDH-IGL 209

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-------LDSAIMSVSGMRVSLAE 334
           R   T ++  +N    +   L   +       +L         L+   +++     ++  
Sbjct: 210 RYAKTTDVVLTNVEIPVENILGGFSSWNRGWDMLASEALDVEKLEITGVALGIAAAAVDN 269

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA++R+  G ++     ++  + +    + A   + +  A+      S S E     
Sbjct: 270 AWEYAQQRNQFGRLISAHQSIRHDLVEAKTKLQACRHMLYHAAHLAQNRVSCSVE----- 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + K +    A  ++ +  + +G  G   E ++ RH R+     I+ GS      ++
Sbjct: 325 --TSMAKLFVGDTALEIVLKCQQVMGAYGCSSEYAMERHVRDIMVMPIVGGSSKMQKNNI 382

Query: 455 LNLLE 459
              L 
Sbjct: 383 AARLR 387


>gi|218780506|ref|YP_002431824.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761890|gb|ACL04356.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 399

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 141/412 (34%), Gaps = 49/412 (11%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGP------GGERWDKVEFHPAWHALLRRSIHDGLH 116
           E       +E  + A    P             G   +D  +         ++ + +G  
Sbjct: 9   ELAFRAELEEFIKSAL--PPDWQERARSWPGGYGAMEYDSEQDRQDAEIFKQKMVDEGWF 66

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
              W + +    R  +   +A      +   A  L   +      +  + T    +DW P
Sbjct: 67  TVSWPKEYGG--RGLSSMEQAIYFERTSYYRAPSLNIATAIMGPTILQIGTEENKEDWVP 124

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
            I   E             + + LG +E   G+D+A+I +   +  D  Y L+G K + S
Sbjct: 125 GIARGE-------------IEMWLGYSEPDAGSDLASIRTTAVREGDE-YVLNGQKIWSS 170

Query: 237 SPMSDAFI-MLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
              +  +  ++A+ +        V  L+ D +  G+  + L N IG  S    E+ F N 
Sbjct: 171 LAHASNYGWVIARTDPDGHRHRSVSILVVDNNTPGVTIRPLINIIGVHSFN--EVFFDNV 228

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+G  N+    +        L   I+++   +  L     Y ++    G  L  
Sbjct: 229 RVPARNLIGQENMGFYYLMTALDFERL---IVNIGAFKHGLEMLCDYVKQTERGGKPLGA 285

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
            P ++R +A+IA  +  A    +R A   D  K  S E+          K    +++  +
Sbjct: 286 DPHVRRKLAEIAARVEIAYLFYWRTATLLDRGKIPSVES-------SALKLVTTELSRML 338

Query: 412 IAEAMECIGGSGYIEERS--------IARHYRESPANSILLGSGNAMVLDVL 455
              +ME +G    + + +          R Y +  + +I  G+       + 
Sbjct: 339 ANASMEILGPYSLLMDPAQGAPMNGMAPRGYLDCISATIGAGTSEIQRNIIA 390


>gi|167897198|ref|ZP_02484600.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894]
          Length = 1293

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/419 (17%), Positives = 139/419 (33%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+    VG   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGVGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEEGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|121714677|ref|XP_001274949.1| acyl-CoA dehydrogenase [Aspergillus clavatus NRRL 1]
 gi|119403103|gb|EAW13523.1| acyl-CoA dehydrogenase [Aspergillus clavatus NRRL 1]
          Length = 434

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 121/326 (37%), Gaps = 29/326 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L   +      V    T      W P             P+ +  +   LG+TE + G
Sbjct: 120 WALGCGNAIGCPPVINFGTEEQKSRWLP-------------PVIRGEIRFCLGITEPQAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D+A+I++  QK  D ++ ++G K ++++ +   +       G  G   +  L+      
Sbjct: 167 SDVASISTTAQKQ-DNVFIVNGTKQWVTNGLFAHYCTAVVRTGGAGKAGISLLVIPLDSK 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+    + +  G  S+    L+F N       LLG+LN     +        L  A   +
Sbjct: 226 GVSRTEI-HSSGVASSGCAALKFDNVEVPAENLLGNLNEGFQLIMSSLNHERLWIAGNCL 284

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
              R+ L ++  +A  R   G  LID+  ++   A++ + I +A AL   L    +    
Sbjct: 285 RLARICLEDSYKHALTRQTFGKPLIDRQAIRLKFANVGMQIVSAYALLESLVQVRESGFK 344

Query: 386 RSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESP 438
           R+ +     +    +  + K    +     + E+ + +G  GY        + R  R+  
Sbjct: 345 RATDIDELGSNIGGLCALAKVSAGRATELAVRESQQILGALGYTRAGPGARVERISRDLR 404

Query: 439 ANSILLGSGNAM----VLDVLNLLEK 460
              I  GS   +    V+     LEK
Sbjct: 405 VLIIGGGSEEILSEMSVMQERKDLEK 430


>gi|317125507|ref|YP_004099619.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
 gi|315589595|gb|ADU48892.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium
           calvum DSM 43043]
          Length = 423

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 106/277 (38%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D  AI +   K  D  Y L+G K F+++   ++  ++ A ++  
Sbjct: 147 GRRWAAMAITEPDAGSDSGAIRTTAVKDGDD-YVLNGEKIFVTAGERAELVVVWATLDRS 205

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
           +G   +   + + S  G    RL++K+G R++ T      N       LLGD  +ST   
Sbjct: 206 LGKKAIKSFVVERSNPGFTLVRLEHKLGIRASDTASFHLDNCRVPARDLLGDPEISTETG 265

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAI--------HYARRRHVSGGILIDQPVMKRAIAD 361
                +   D+    V+ M V L  A           A          + Q      +A+
Sbjct: 266 FGG-AMATFDNTRPLVAAMAVGLTRACLDTTTELLARAGVTVDWDRPPLSQSAAAARLAE 324

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  +  AA  L  R A   D  +  S EA+ A+  A        +    V    +E  G 
Sbjct: 325 LEAEYQAAYLLMMRAAWMADNGRPNSMEASMAKAKAG-------RTCVDVALACVELGGP 377

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E   + +  R++    I  G+    +L V   L
Sbjct: 378 TGYAETELLEKWARDAKILDIFEGTQQIQLLVVARRL 414


>gi|167921798|ref|ZP_02508889.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215]
          Length = 1293

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/419 (17%), Positives = 139/419 (33%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+    VG   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGVGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEEGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|317139501|ref|XP_001817552.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40]
          Length = 467

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 124/369 (33%), Gaps = 38/369 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQ 145
           +  D+ E  P           DG                    I  A + +       A 
Sbjct: 96  QECDQNERDP--KDFHAALAKDGWLGIALPEELGGAGL----GISEATMMMQTITQSGAG 149

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V +   +A   T +  K+  PKI +  +                 G+TE 
Sbjct: 150 MAGAQSIHANVYATQPLAKFGTNQQLKEIIPKIINGTWR-------------TCFGVTEP 196

Query: 206 RGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVP 259
             G +   + +   K  +   Y +SG K +++ + ++   I+LA+       +     + 
Sbjct: 197 NTGLETLKLKTLATKNPEKQTYSISGQKIWITCAQVASKMILLARTTPLEEVKKSSQGLS 256

Query: 260 RLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
               D   N  GL  +++K K+G R+    E+ F N       L+G  N     +     
Sbjct: 257 LFCIDLDRNKSGLDMRKIK-KMGGRAVDANEVFFDNYEIPESTLIGQENEGFKIILHGMN 315

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++     +L  A  YA  R V G  +     +   +AD  + + AA   ++
Sbjct: 316 AERCLLAGEALGLGYAALERAAQYASDRVVFGRPIGQNQGIAHPLADAYMQLEAAKLATY 375

Query: 375 RLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  +D +K   S       +     KY   + A      A+   GG GY  E  + R+
Sbjct: 376 HAARLYDASKTDDSIPFHSVGVACNSAKYLAAEAAFKACERAVLSHGGMGYAMEYDVERY 435

Query: 434 YRESPANSI 442
            RE     I
Sbjct: 436 LRECLVPRI 444


>gi|254185414|ref|ZP_04892002.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
 gi|184209649|gb|EDU06692.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655]
          Length = 1289

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQAMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|256372533|ref|YP_003110357.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009117|gb|ACU54684.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 512

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 40/324 (12%)

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
           L++     A  +    T      + P + S E             +   + +TE   G+D
Sbjct: 198 LITRPEIIARAILAGGTEEQRVRYLPALASGE-------------LMGAVAVTEPDYGSD 244

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-------LVPRLLE 263
           +A+IT+Q     D         W   +  ++   +LA+ E             LVP+   
Sbjct: 245 VASITTQAILGPDTATVRGTKTWCTFAGRANLLAVLARTEPDPSLRHRGLSLLLVPKDPV 304

Query: 264 DGSPNGLCYQ------RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316
            G    L         R  + +G R   + E+ F +        +    G      + + 
Sbjct: 305 PGHSFDLEIGGGRLTGRAIDTLGYRGMHSYEVAFDDVSVAREQIVGGEEGRGRGFYLQMA 364

Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
                 L +   +V  M  +LA+A  Y   R V G  L D  + +R +A +   +AAA A
Sbjct: 365 GFENGRLQTVARAVGLMDAALAQARAYVANRRVFGRSLADYTLTRRKLARMVATVAAARA 424

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
            ++R A   +     + E + A   A + K W C+ A  V  EA +  GG GY EE  ++
Sbjct: 425 AAYRTARHLE-----TPEGSLA---ASMAKAWSCRQAELVTREAQQLHGGMGYAEEYPVS 476

Query: 432 RHYRESPANSILLGSGNAMVLDVL 455
           R++ ++   SI  G+   + L V+
Sbjct: 477 RYFVDARVLSIFEGADETLSLRVI 500


>gi|308447058|ref|XP_003087325.1| hypothetical protein CRE_15257 [Caenorhabditis remanei]
 gi|308257393|gb|EFP01346.1| hypothetical protein CRE_15257 [Caenorhabditis remanei]
          Length = 399

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 24/277 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  D  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 124 KGTWAAMAITEPGCGSDSAAIRTTATKDGDD-YILNGEKIFVTSGDRADSVVVWATLDKK 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
           +G   +   +      G+  +RL++K+G +++ T  + F +       LLG+  +     
Sbjct: 183 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAAISFIDCRVPGANLLGNAEIDVAKG 242

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGIL---IDQPVMK-----RAIA 360
               ++   D+    V+ M V  A+A +   +   +    L      P ++       I 
Sbjct: 243 FAG-VMETFDNTRPLVAAMAVGCAKASLERIKD--IFKDELDPDYATPYLQTSNLAAQIY 299

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  +  AA  L+ +     D  K  S E       A I K    ++   +  + +E   
Sbjct: 300 RMEAEWEAARLLTIKATWMADNKKPNSRE-------ASIAKAKAGRICNEITLKCVELAA 352

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             GY E+  + +  R+S    I  G+     L +   
Sbjct: 353 SVGYNEDELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|150249475|gb|ABR67753.1| CmnJ [Saccharothrix mutabilis subsp. capreolus]
          Length = 383

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 133/372 (35%), Gaps = 26/372 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAG 149
           + W++    P  H L +    +GL           +     +    A+    + A   A 
Sbjct: 27  DDWERDGVMPV-HQLCKTLAAEGLLGLTMPVEDGGLGLDLGYSYVWAQELGRVPAGAPAM 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L   +   A ++A   TP V +D                P  +  +   L  TE  GG+
Sbjct: 86  ALSVQTDIVAPLLARAGTPEVRRDVL-------------RPAIRGELVAALAATEPAGGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
           D+ A+T+   +   G        +  +  ++D  ++L +     G   +  L+   +  G
Sbjct: 133 DLGALTTTAVRTERGFTVNGTKAFITNGSVADFAVVLCRTGEAAGIGDLALLVVPTNLAG 192

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIYLDS--AIMSVS 326
           +   R   K+G+RS     L F++        L  V  G     +         A++++ 
Sbjct: 193 VRQVRHTGKLGHRSCDHGTLTFTDVEVPAAYLLGEVGEGYELQTRTFTRERCFLAVVALG 252

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                L   +H+ARRR V G  L D   +   +A++  ++    + +        +    
Sbjct: 253 QAERVLRATVHHARRRRVLGRALTDHQAIGFRLAELDAELDLVRSYAGEAYQLLADGAQC 312

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E       A I K    ++   V    ++  G +GY+    + R YR++ A S   G+
Sbjct: 313 LRE-------ASIAKLRATRLLREVADVGLQVRGAAGYLGVDDVERTYRDARAGSFAGGA 365

Query: 447 GNAMVLDVLNLL 458
             A++  +   L
Sbjct: 366 DEALLHLIAGHL 377


>gi|262202820|ref|YP_003274028.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262086167|gb|ACY22135.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 395

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 105/297 (35%), Gaps = 25/297 (8%)

Query: 77  ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136
           A+  TP    +   G  WD+  F  A          +GL        F         +  
Sbjct: 22  ADQITPNHENWEEQGL-WDRSLFTEAGK--------NGLLGFPVPEEFGGPGVDD-FRYN 71

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           A  +   A+  A         +A  +A      V   +  ++   E        +     
Sbjct: 72  AIVIEETARTGA---------AAEAIAFSLQNDVVLPYLVEMTDDEQKARWLPGVVAGET 122

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGC 255
            + + +TE   G+D+  I +   +  D  Y ++G K F+S+  + D F++ A+       
Sbjct: 123 VLAIAMTEPGAGSDLTGIRTTAVRDGDH-YLVNGSKTFISNGRNGDLFVVAARTSPEK-H 180

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDM 312
             +  L+ +    G    R  +KIG  +  T EL F++    +   LGD       +   
Sbjct: 181 KGLTLLVVEADTPGFARGRNLDKIGLHAQDTSELAFTDMRVPVANRLGDEGQGFYQLVGN 240

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                L  AI +V+    + A  + Y R R   G  +      +  +A++A ++  A
Sbjct: 241 LPQERLSLAIGAVAAAEGTFARTMEYVRERTAFGSPISSFQNTQFVLAELATELDIA 297


>gi|217424565|ref|ZP_03456063.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
 gi|217392489|gb|EEC32513.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576]
          Length = 1289

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|254187301|ref|ZP_04893815.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|157934983|gb|EDO90653.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
          Length = 1293

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNHEMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPNAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|302556287|ref|ZP_07308629.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302473905|gb|EFL36998.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 400

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 124/360 (34%), Gaps = 35/360 (9%)

Query: 101 PAWHALLRRSIHDGL---HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           P    L   +   G+   H  +        +  QA    AA   L+  L A +  +P   
Sbjct: 43  PLRRRLQEAARAAGVFAPHVGVGWGGLGLDLCGQAVVFEAAGYSLLGPL-ALNCAAPDEG 101

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAIT 215
           +  ++ ++ T    + +               P+    V     +TE     G D  A+ 
Sbjct: 102 NTHLLEVVATEEQKERYL-------------RPLAAGEVRSCFAMTEPAPGAGADPRALA 148

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQ 273
           +   +   G + + G KWF+S      F I +A+  G  G        L D    G+   
Sbjct: 149 TTATRSGGG-WRIDGRKWFISGADGAGFAICMARTSGVPGDAGGATMFLVDADNPGMKVV 207

Query: 274 RLKNKI--GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           R  + +  G     + E+         G +LG+++      +       +   +  +   
Sbjct: 208 RNIDTLDQGLFGGHS-EVVLDGCEVGEGAVLGEVDQGFTYAQVRLGPARMTHCMRWLGVA 266

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           R +   A+  A  R   G  L +  ++++ +AD  +DI  + A+  R     D+ +    
Sbjct: 267 RRAQDIALERAADRTAFGKPLAELGMVQQLLADSEIDIETSRAVLLRACWELDQGRP--- 323

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               A     I K +  +    V+  A++  G  G   +  ++R YRE     I  G   
Sbjct: 324 ----AAQHTSIAKTYVSEAVNRVVDRAVQVCGALGISGDAPLSRLYREVRPFRIYDGPSE 379


>gi|254427662|ref|ZP_05041369.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
 gi|196193831|gb|EDX88790.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp.
           DG881]
          Length = 399

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 129/372 (34%), Gaps = 35/372 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL  ++   GL        F+    +    +  A + ++ +  A     P V + +    
Sbjct: 47  ALREKAKAAGLWG------FQLPKERGGLDVGVAGMAVLYEEAARSPFGPVVFNCAPPDD 100

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKIS 222
            T          KI + E       PM    V     +TE     G+D +   +   +  
Sbjct: 101 GT-----MVLLNKILNDEQKERWLQPMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATREG 155

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + + G KWF++    +  FI++A+         +   L D    G    R    +G 
Sbjct: 156 DN-WIIKGRKWFITGAEGAQTFILIAKTSDDP-RKGLTAFLFDADQPGWEVVRRIPIMGP 213

Query: 282 --RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS-----VSGMRVSLA 333
                   EL+F    G ++ D N      + +K+  I L +A ++     +   +  + 
Sbjct: 214 EEHGGH-CELKFD---GLVIPDENRLLEVGDGLKVTQIRLGTARLTHCMRWLGLAKRCME 269

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           EA  Y   R   G  L +   ++  + D+A DI     L+ + A   D+         +A
Sbjct: 270 EAADYVENRMSFGTTLAEHEGVQWMLGDVAKDIEVGRLLTMQAAWMLDQGD-------FA 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +    + K             A++  G  GY ++  +   YR +    ++ G+     + 
Sbjct: 323 KKEISMAKIHVADTLHKAADTAIQLCGARGYSKDTLLEWIYRYARQARLVDGASEVHKMV 382

Query: 454 VLNLLEKGTNLF 465
           +  +  K    F
Sbjct: 383 LSRIYLKEKRGF 394


>gi|126443146|ref|YP_001061749.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
 gi|126222637|gb|ABN86142.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668]
          Length = 1291

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|161504460|ref|YP_001571572.1| hypothetical protein SARI_02573 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865807|gb|ABX22430.1| hypothetical protein SARI_02573 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 387

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 115/365 (31%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                R D+ + +P     +      G   ++    F         +       +     
Sbjct: 25  DKYHRRIDETKSYPE--EFVNTLTKAGWLAALIPEEFGGSGLGLT-EASIIMEEINRSGG 81

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    + +  + W P+I S E+                +G+TE   
Sbjct: 82  NSGACHGQMYNMNTLLRHGSDKQKQFWLPRIASGEWR------------LQSMGVTEPTT 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   I +   K  D         W      SD  I+L +       +     +   + 
Sbjct: 130 GTDTTRIKTTAVKKGDRYVINGQKVWISRVQHSDWMILLVRTTPLGDVKRKSEGMSIFMV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      NG+  Q + N + N    T EL F N       L+G+  +    + D      
Sbjct: 190 DIKEAMKNGMTVQPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +      +     Y   R V G  +     ++  IA+  + + AA  + F+  
Sbjct: 247 TLIAAECIGDGYWFIDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIGVEAANLMRFKAC 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             FD+  S   +A  A+ +A    +             ++  GG G+  E  I R +RE+
Sbjct: 307 ELFDQKLSCGAQANMAKYLAAKASW-------EAANACLQFHGGYGFACEYDIERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|328545426|ref|YP_004305535.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326415168|gb|ADZ72231.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 386

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 121/357 (33%), Gaps = 27/357 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL++     GL        F  +     +          A    G++   +  +  ++A 
Sbjct: 42  ALVKEMGGLGLIAPELSEEFGGMGADYLYSGAIIEEIGKADFTFGYVPLLASLNGHILAT 101

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
                + +DW  K+ + E             + + + LTE +GG+D AA+  + ++    
Sbjct: 102 FARREIARDWLVKLTAGE-------------LILAIALTEPKGGSDAAALGLKMERDG-A 147

Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            Y L+G K  +S + M+   +  A+          V  LL      G+   +  N +G  
Sbjct: 148 YYVLNGEKTSISANQMAKGVVTFARTGRPEDRARGVSALLVPLDLPGITTSKFSN-MGQN 206

Query: 283 SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           S     + F N      +LLG+       V            + ++   R SL E   Y 
Sbjct: 207 SIGHGSIWFDNVRVPTEYLLGEEGKGFAQVMQGFDFSRSLIGLQALGAARQSLDETWAYI 266

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L     +   +AD    I AA  +S       D     + EAA  +   P+
Sbjct: 267 GERKAFGKPLAAFQGITHQLADFDTRIEAARLMSLNALWLKDRGLPHTAEAAMTKWWPPL 326

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                  +A   I   +   G +GY +     +  R+     I  G+ + M   +  
Sbjct: 327 -------LAYEAIHACLLIHGHAGYSDTLPFQQRLRDVLGLQIGDGTAHIMKNIIAR 376


>gi|167827126|ref|ZP_02458597.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9]
          Length = 1326

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 715  EGLLGMQIDRAYGGLGLTNHEMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 774

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 775  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 821

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 822  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 878

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 879  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 938

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 939  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 992

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 993  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1052

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1053 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1111


>gi|117164580|emb|CAJ88126.1| putative glutaryl-CoA dehydrogenase [Streptomyces ambofaciens ATCC
           23877]
          Length = 397

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 119/360 (33%), Gaps = 30/360 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA---GHLMSPSVTSASM 161
            L+ R    GL    ++  +       +H +       M++++A         +  +   
Sbjct: 55  ELIARFRESGLVGLPYEG-YGEPGPAASHLLTGMMAMEMSRVDASVATFFGVHNGLAMYS 113

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQK 220
           V         + W P +   E                   LTE   G+DIAA + +  ++
Sbjct: 114 VQAGGDEEQRERWLPGMARME-------------TVGAFALTEPLDGSDIAAGMRTTARR 160

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D        +W  ++  +D  ++ A+             +      G   + + +K  
Sbjct: 161 EGDTWVIDGAKRWIGNATFADHVVVWARDVEDDQVKG---FVVGRGTPGFTAEPIAHKTS 217

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHY 338
            R     ++  +         L   +   +  +IL       A  ++  M  +   A+ Y
Sbjct: 218 LRIVQNADITLTGVRVPETDRLQRVSSFRDVAEILRATRSGVAWQALGVMIGAYELALRY 277

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L    +++  +     +I ++  +  +LA   D    R E ++ A     
Sbjct: 278 ATERQQFGRPLAGFQLVQDLLVKSLGNITSSWGMLLQLARMQDAGVFRDEHSSLA----- 332

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             K         V+A A E  GG+G + E  +AR + ++ A     G+     L V   +
Sbjct: 333 --KAHVTARMREVVAWAREIFGGNGIVLEHDVARFFADAEAIYSFEGTREMNTLIVGKAI 390


>gi|254489431|ref|ZP_05102634.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
 gi|214041938|gb|EEB82578.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101]
          Length = 382

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 96/272 (35%), Gaps = 10/272 (3%)

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250
           +        L ++E   G+D+AAI +    +  G        +  ++P++D  ++LA+  
Sbjct: 115 LATGRKIGALAVSEPEAGSDLAAILTTAVAVDGGYRLEGRKCYVTNAPVADVLVVLAETR 174

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310
                F +     +    GL      +K+G R+ +  ++E           +      + 
Sbjct: 175 PGNLAFGLSAFCLERGTPGLTTPAPVSKMGLRTASMGDVELDGCLVPKSARIGAEGAGLS 234

Query: 311 DMKILIYLDSA---IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
               ++ ++ A     ++  M        HYA+ R      + +   +   +A++    +
Sbjct: 235 LFLKVMEMERAFILAPAIGSMERVFEATRHYAQNRKQFDQPIAEFESVYGRLAEMYRRTS 294

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
            A  +    A       S + EA+ A++         C+       +A+      GY+  
Sbjct: 295 LARLVLRDAAARKGSGGSITLEASMAKLTISDAWVANCQ-------DALAIFAAKGYLSA 347

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
             I R  R++    I  G+ +     +  +L 
Sbjct: 348 TGIERELRDALGGQIYSGTSDIQRRTIAKMLR 379


>gi|259480354|tpe|CBF71407.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue;
           AFUA_7G06510) [Aspergillus nidulans FGSC A4]
          Length = 427

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 127/365 (34%), Gaps = 30/365 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D++E  P            G                 +      +    +       
Sbjct: 54  QECDQLERDP--KEFHAALAKAGWLGIALPEEHGGAGLGISEATIMMQTITQSGAGMAGA 111

Query: 152 --MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +V +   +A     +   +  P I + ++                 G+TE   G 
Sbjct: 112 QSIHANVYATQPLAKFGNEQQLTETIPNIINGKWR-------------TCFGVTEPNTGL 158

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLE 263
           +  A+ ++ +  S G  Y ++G K +++ + ++   I+LA+ + R         +     
Sbjct: 159 ETLALQTRAELNSTGTHYSITGQKIWITCAQVARKMILLARTKPREEVSKPTQGLSMFCI 218

Query: 264 D--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D   +  GL  +++K K+G R+    E+ F         L+G  N     +         
Sbjct: 219 DIDKNEPGLELKKIK-KMGGRAVDANEVFFDKYQVPASTLIGRENEGFRMILHGMNAERC 277

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    V+L  A  YA  RHV G  +     +   +AD+ + + AA   ++  A 
Sbjct: 278 LLAGEALGLGYVALERAAEYANTRHVFGRAIGKNQAIAHPLADVYMKLEAAKLATYHAAR 337

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D +++  S  A    + A   KY   + A      A+   GG GY  E  + R  RE 
Sbjct: 338 LYDASRTDESIPAHSVGVAANSAKYLAAEAAFTACERAVLTHGGMGYAMEYDVERWLREC 397

Query: 438 PANSI 442
               I
Sbjct: 398 LVPRI 402


>gi|169627432|ref|YP_001701081.1| putative acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC
           19977]
 gi|169239399|emb|CAM60427.1| Putative acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 393

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 125/390 (32%), Gaps = 35/390 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L A+GP  E  D+         L+ ++   GL       S+         +       
Sbjct: 32  PRLTAHGPTEELRDE---------LVGKARAAGLLTVQAPESYGGWGLSHIGQAVIFEAA 82

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             + L    +   +    +M  L            KI + E       P+ +        
Sbjct: 83  GWSTLGPIAMNCAAPDEGNMFLLG-----------KITNEEQSEKFLRPVIEGYQRSAFA 131

Query: 202 LTEK-RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-LV 258
           +TE    G+D + + +           ++G KW ++    +  +I++A +E         
Sbjct: 132 MTEPDGAGSDPSQLKTSATFDGQNF-VINGRKWLITGARGAKTWIIMANLEANDHLPEGP 190

Query: 259 PRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314
              L DG   G+  +R+ N +  N +     + F N       LLG+   +    +    
Sbjct: 191 TLFLCDGETEGIVIERIMNTMDRNYAEGHAVVRFDNLTLPREALLGETGQAFRYAQLRLA 250

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L   +  +     +   A+ YAR R   G  + +   +   +AD  + +       +
Sbjct: 251 PARLTHCMRWLGAASRAQDIAVDYARTRTSFGKTIGEHQGVSFMLADNEIALHQCRLTIW 310

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
                 D       E++ A       K +  +    V    ++ +GG G  +E  +   +
Sbjct: 311 HACWMMDNGAKGRHESSMA-------KSFVSEELFKVTDRCVQVLGGIGISDETPVEMIF 363

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464
           R+  A  +  G        +   + +    
Sbjct: 364 RDMRAFRLYDGPTEVHKYAIGRQVLRTPRA 393


>gi|242768477|ref|XP_002341577.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724773|gb|EED24190.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 443

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 122/313 (38%), Gaps = 17/313 (5%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKW 233
             K   RE        +        + +TE   G+D+A IT+  +K +DG  Y ++G K 
Sbjct: 135 LVKYAPRELQERVLPDLLTGKARACIAITEPDAGSDVANITTVAEKSADGKEYVINGTKK 194

Query: 234 FLSSPMSDAFIMLAQVEGRVGCF--LVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELE 290
           ++++ +   +  +A   G  G     +  LL    +  G+  + +K   GN ++ T  +E
Sbjct: 195 WITNGIWAEYTTMAVRTGPPGSGAAGLSLLLVPLKNYPGVSMRPIK-VCGNETSGTTYIE 253

Query: 291 FSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
             +       L+G        +        L  A+      RV+L+ A  Y  +R     
Sbjct: 254 LDDVHVPISNLIGAEGAGMKYIMTNFNHERLSIAVGVTRQARVALSTAFEYVLKREAFSK 313

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCK 406
            LI QPV++  +A    ++ + +A   +    F   K + E+A      +  + K     
Sbjct: 314 PLIAQPVVRHRLAKAGAELESLSAWIEQF--LFQMTKLKKEDADRELGGLTAMAKAKAGM 371

Query: 407 MAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           +       A+   GG+G         I R YR+ P   I  GS + ++   +  L K   
Sbjct: 372 VLNECSQTAVLLFGGNGLTRTGRGELIERIYRDVPTARIPGGSEDVLLDLGVRQLVK--- 428

Query: 464 LFEQLFSTLEQDL 476
           ++E     LE+D 
Sbjct: 429 IYEAGIKRLERDA 441


>gi|170691768|ref|ZP_02882932.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
 gi|170143052|gb|EDT11216.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M]
          Length = 396

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 132/394 (33%), Gaps = 24/394 (6%)

Query: 63  EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122
           +++L+   +     A           P     ++     A   ++R     G    ++  
Sbjct: 3   DFLLTDEDRAFRAEARAFL--QRELAPRAADIEERRDWDAVKRVVRALGEAGYLRLMFAD 60

Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
            +   + K          +     E    ++ +  +    AL     +H+       SRE
Sbjct: 61  LYRGSLTKPG------LTHATILSEEASAINYAFETTIATALSCAYPLHRH-----ASRE 109

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMS 240
                  P+        + +TE   G+D A + ++ +  +  D        ++  ++ ++
Sbjct: 110 VRDAYLEPILDGRAIGAICVTEPGTGSDSADMQTRVEYDARTDEWVINGFKRYISNASVA 169

Query: 241 DAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--- 296
           D +I         +    +  +       G+ + R    +G       E++F +      
Sbjct: 170 DVYIAYGITPRDGLERPGITAVAVPKDARGISFPRNYTFMGRHGCIVGEVKFDDCRVGAD 229

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG        +  M            +   R +   A  +A+ R   G +L  + ++ 
Sbjct: 230 HLLGVAGEGFAIMRGMFNFERAILGGSGLGVARSAFDIARAHAQSRRTFGQLLGCKQLIW 289

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA ++  I AA  L++R    +D       +       A + K    + A   + E +
Sbjct: 290 DKIAQMSWRIDAAELLTYRATKMYDAGA----DGKALMKEAAMAKLVATETANFCVNETV 345

Query: 417 ECIGGSGYIEERS-IARHYRESPANSILLGSGNA 449
           + +GG G  +E     + YR++ A +I+ G+   
Sbjct: 346 QILGGDGLTKEYGRAEQLYRDARALTIVGGTSEM 379


>gi|167905574|ref|ZP_02492779.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei NCTC
            13177]
          Length = 1291

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|237837527|ref|XP_002368061.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|211965725|gb|EEB00921.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii ME49]
 gi|221509176|gb|EEE34745.1| acyl-CoA dehydrogenase, putative [Toxoplasma gondii VEG]
          Length = 454

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 119/356 (33%), Gaps = 27/356 (7%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            + ++    GL    +      +   +A  +      + A     +L+   + +   +A+
Sbjct: 117 EICKKFGPAGLQIKGY--GCPGLTHTEAILMAVEMARVDASFSTFYLVHCGL-AMQSIAV 173

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T      W PK             M +       GLTE   G+D   + +  +K+  G
Sbjct: 174 AGTQEQKAMWLPK-------------MSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGG 220

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  +W  ++  SD  ++ A+    V    +   + +    G    +++NK+  R  
Sbjct: 221 WILNGQKRWIGNATFSDIVVVWAR---DVHSEKILGFIVEKDFPGFSATKIENKVSLRIV 277

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRR 342
              ++   + F      L          ++L       A   V  +  +   A+ Y   R
Sbjct: 278 QNADIVLKDCFVPDSHRLQHEGFSGATAQVLESSRAVVAAECVGVLLGAYDNALKYCTER 337

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L    +++  +  +   +     L  RL    DE K              + K 
Sbjct: 338 KQFGRELATFQLVQERLMRVLGMLQGVLLLVLRLGRLMDEGKPHMMA------HIALAKA 391

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            C ++A   IA   E +GG+G + +  +A+ + +  A     G+ +  +L     +
Sbjct: 392 TCSRVAREGIALCREVLGGNGIVTDFGVAKFHADIEALYTYEGTYDINMLIAGRAV 447


>gi|226196451|ref|ZP_03792032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|225931327|gb|EEH27333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9]
          Length = 1293

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNHEMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|15827272|ref|NP_301535.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN]
 gi|221229750|ref|YP_002503166.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
 gi|2326699|emb|CAB11012.1| hypothetical protein MLCB1779.31 [Mycobacterium leprae]
 gi|13092821|emb|CAC30169.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae]
 gi|219932857|emb|CAR70754.1| putative acyl-CoA dehydrogenase [Mycobacterium leprae Br4923]
          Length = 400

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 19/284 (6%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-I 244
           TNK   +   V   + +TE   G+D AA+++      D  Y ++G K F+++       +
Sbjct: 116 TNKQLERLGKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIV 174

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GF 297
           + A ++  +G   +   +      G+  +RL+ K+G R + T  + F N         G 
Sbjct: 175 VWATLDKSLGHAAIKSFIVPREHPGVTVERLEYKLGIRGSDTAAIRFDNVRIPKDNLLGN 234

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPV 354
              ++      V +         A M+V   R +L E         +          Q  
Sbjct: 235 PEIEVGKGFSGVMETFDNTRPIVAAMAVGVGRAALEEIRKILTDAGIEICYDKPSHSQNA 294

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
                  +  D  A+  LS R A   D     S+EA+ ++  A        +MA  V  +
Sbjct: 295 AAAEFLRMEADWEASYLLSLRAAWQADNNIPNSKEASMSKAKAG-------RMASDVTLK 347

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A+E  G +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 348 AVELAGTAGYSEKALLEKWARDSKILDIFEGTQQIQQLVVARRL 391


>gi|126456025|ref|YP_001074694.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242311146|ref|ZP_04810163.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
 gi|126229793|gb|ABN93206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|242134385|gb|EES20788.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b]
          Length = 1283

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 672  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 731

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 732  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 778

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 779  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 835

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 836  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 895

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 896  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 949

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 950  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1009

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1010 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1068


>gi|167913884|ref|ZP_02500975.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei 112]
 gi|254198940|ref|ZP_04905358.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
 gi|169657112|gb|EDS88506.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13]
          Length = 1295

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNHEMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|167848625|ref|ZP_02474133.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei B7210]
          Length = 1294

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNHEMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|319777953|ref|YP_004134383.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171672|gb|ADV15209.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 382

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 33/349 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +      G    +   ++       +           A    G      + +   + 
Sbjct: 34  REFVEALTEAGWLSILIPEAYGGSGLPLSAAAAVLEEIQRAGCN-GGACHAQMYTMGTLV 92

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E                  G+TE   GTD  A+ +      D
Sbjct: 93  RHGSEAQKQRYLPKVAAGELR------------LQAFGVTEPTSGTDTGALKTTAHLDGD 140

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP---NGLCYQRLK 276
                    W   +  SD  ++LA+     +G      +  L+ D       GL  + ++
Sbjct: 141 HFVVKGQKIWTSRAEHSDLMLLLARTTPLKDGMKKTDGLSVLIVDMREAVGKGLTIRPIR 200

Query: 277 NKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + N +  T E+ F +       L+G+       +        +  A   V   +  + 
Sbjct: 201 TMM-NHA--TTEVFFDDLRMPAENLIGEEGKGFRYILSGMNAERILIAAECVGDAKWFIE 257

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           ++  YA+ RHV G  +     ++  IA    ++ AA  +     N ++  K+   EA  A
Sbjct: 258 KSSVYAKERHVFGRAIGQNQGIQFPIARAYANMRAAELMVREALNLYEAGKNPGAEANMA 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +++A          +       ++  GG G+ EE  + R +RE+    +
Sbjct: 318 KMLAA-------DASNEAANVCIQTHGGFGFAEEYDVERKFRETRLYQV 359


>gi|115399778|ref|XP_001215478.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191144|gb|EAU32844.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 453

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 119/369 (32%), Gaps = 38/369 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQ 145
           +  D+ E  P           DG                    I  A + +       A 
Sbjct: 82  QEHDQTEQDP--KEFHAALAKDGWLGIALPEELGGAGL----GISEATMMMQTITQSGAG 135

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           +     +  +V +   +A   T    ++  PKI +  +                 G+TE 
Sbjct: 136 IAGAQSIHANVYATQPLAKFGTKEQREETIPKIINGTWR-------------TCFGVTEP 182

Query: 206 RGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVP 259
             G +   + +  +K +  D         W   + ++   I+LA+       +     + 
Sbjct: 183 NTGLETLKLKTLARKNASQDAYSVTGQKIWITCAQVASKMILLARTTPLEDVKKSTQGLS 242

Query: 260 RLLEDGSPN--GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKI 314
               D   N  GL  +R+K K+G R+    E+ F N       L+G        +     
Sbjct: 243 VFCIDLDRNKPGLDMRRIK-KMGGRAVDANEVWFDNYQIPAKTLVGQEGEGFRIILHGMN 301

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                 A  ++     +L  A  YA+ R V G  +     +   +AD  + + AA   ++
Sbjct: 302 AERCLLAGEALGLGYAALERAAQYAKERVVFGRPIGQNQGIAHPLADAYMKLEAAKLATY 361

Query: 375 RLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
             A  FD +KS  S       +     KY   + A      A+   GG GY  E  + R+
Sbjct: 362 HAARLFDASKSDGSIPVQSVGVACNSAKYLAAEAAFTACERAVLSHGGMGYAMEYDVERY 421

Query: 434 YRESPANSI 442
            RE     I
Sbjct: 422 LRECLLPRI 430


>gi|167818752|ref|ZP_02450432.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91]
          Length = 1324

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 712  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 771

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 772  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 818

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 819  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 875

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 876  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 935

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 936  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 989

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 990  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1049

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1050 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1108


>gi|108798573|ref|YP_638770.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119867672|ref|YP_937624.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126434171|ref|YP_001069862.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108768992|gb|ABG07714.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119693761|gb|ABL90834.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126233971|gb|ABN97371.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 404

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++  +   D  Y ++G K F+++       ++ A ++  
Sbjct: 128 KGVWAAMAITEPGFGSDSAAVSTTARLEGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 186

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   +      G+  +RL++K+G +++ T  + F N        L      VE  
Sbjct: 187 LGRAAIKSFIVPRDHPGVTVERLEDKLGIKASDTAVIRFDNARIPKDNLLGDPEIHVEKG 246

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADI 362
              ++   D+    V+GM V +  A     R+ ++              Q         +
Sbjct: 247 FAGVMETFDNTRPVVAGMAVGIGRAALEELRKILTDAGVEISYDKPAHAQSAAAAEFLRL 306

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A   L+ R A   D A   S+EA+ A+  A        ++   +  + +E  G  
Sbjct: 307 EADWEAGYLLTVRSAWQADNAIPNSKEASMAKAKAA-------RVGSDITLKVVEMAGTV 359

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY EE  + +  R+S    I  G+     L V   L
Sbjct: 360 GYSEESLLEKWARDSKILDIFEGTQQIQQLVVARRL 395


>gi|111019328|ref|YP_702300.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110818858|gb|ABG94142.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 403

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 137/359 (38%), Gaps = 35/359 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L + +   G+        +         +A    AA   L     A ++ +P   +  M
Sbjct: 48  ELQKAAKDAGVFAPHAPVEYGGHGLNMTDRAPVFEAAGYSLFGP-TALNIGAPDEGNVHM 106

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +A + +P   + +              AP+    +     +TE     G+D +A+T++ +
Sbjct: 107 LAHIASPEQKERFL-------------APLAHGDMRSAFAMTEPSPGAGSDPSALTTRAE 153

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKN 277
           K+  G + ++GHK+F++    +  FI+ A+  G  G        L      GL   R  +
Sbjct: 154 KVPGG-WKINGHKYFITGADGAGFFIIFARTSGVPGDRGGATMFLTPADAEGLRVGRHID 212

Query: 278 KIGNRSN--ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            + +R+      E+ F + F     +LG+++      +       +   +  +   R   
Sbjct: 213 TL-DRAMIGGHCEVFFEDLFVPDSGVLGEVDQGFAYAQVRLGPARMTHVMRWLGAARRGH 271

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A+ +  +R   GG L D  ++++ +AD  +DIAA+ AL  R     D+         +
Sbjct: 272 DVAVAHVAQRDGFGGKLGDLGMVQKMVADNEIDIAASRALLTRACWELDQG-------GH 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           A     I K +  +    ++  +++  GG G   +  +AR  RE     +  G      
Sbjct: 325 ASNSTSIAKTYASEAIFRIVDRSIQMCGGLGVSGDLPLARLSREVRPFRVYDGPSEVHR 383


>gi|38047653|gb|AAR09729.1| similar to Drosophila melanogaster CG7461 [Drosophila yakuba]
          Length = 221

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 95/223 (42%), Gaps = 18/223 (8%)

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           V   + + S  G+     + K+G +++ T E+ F +    +    NV     +  K+ + 
Sbjct: 9   VTAFIVERSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPV---ENVLGKEGDGFKVAMN 65

Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
            L++    +       M+  + +A  +A  R   G  L +   ++  +A + +   A  +
Sbjct: 66  ILNNGRFGMGATLSGTMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATES 125

Query: 372 LSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
           ++F ++ + D   K    EAA       I+K +  + A  V  EA++ +GG GY+ +  +
Sbjct: 126 MAFTISQNMDAGSKDYHLEAA-------ISKIYASESAWYVCDEAIQILGGMGYMVDTGL 178

Query: 431 ARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTL 472
            R  R+     I  G+ + + L + L  ++   +  ++L    
Sbjct: 179 ERVLRDLRIFRIFEGTNDILRLFIALTGIQYAGSHLKELQRAF 221


>gi|103488374|ref|YP_617935.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98978451|gb|ABF54602.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 527

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/449 (18%), Positives = 137/449 (30%), Gaps = 51/449 (11%)

Query: 45  ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPA-- 102
              A   +    EL   G   L            + +  LH       R     F  A  
Sbjct: 100 GAEARALADASAELLDAGHAALRAEVAAALAAEQWPSETLHDADLDAIRDQFRRFTDAEI 159

Query: 103 ------WH--------ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
                 WH        A +R     G         F  +   +              + A
Sbjct: 160 VPHAHRWHLANALIPDATVRAMADLGTFGVCIPEEFGGLGLSKLVMCLVTEELSRGWIGA 219

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           G L + S  +  ++A   T     +W P+I S    PT                TE   G
Sbjct: 220 GSLGTRSEIAGELIATGGTDAQKAEWLPRIASGAILPTAV-------------FTEPDVG 266

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSP 267
           +D+ ++ ++ +             W   +  SD   +LA+      G   +  LL     
Sbjct: 267 SDLGSLQTRARFAQGRWVIDGAKTWITHAARSDLMTLLARTLPDARGYAGLSMLLVPKPR 326

Query: 268 N---------GLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGDLNVSTGPVEDMKI 314
                     G+    +   +G R      L+F          L G        +     
Sbjct: 327 GTDADPFPAAGMSGSEIA-VLGYRGMREYALQFDGMAAPADALLGGVEGQGFKQLMRTFE 385

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              + +A  +V   R +L   + YA  R   G  +I  P +   +A   +D   A  L++
Sbjct: 386 GARIQTAARAVGVARRALELGLDYAMNRRQFGRAIIAFPRVADKLAMSVVDFVMARELAY 445

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A + D  K    EA  A+++A        + A      +++  GG+GY  E  I+R  
Sbjct: 446 AAARAKDSGKRCDIEAGMAKLLAA-------RAAWVNADASLQIHGGNGYALEYEISRVL 498

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTN 463
            ++   +I  G+       +   L +G N
Sbjct: 499 CDARILNIFEGAAEIQAQVIARGLIEGRN 527


>gi|302549774|ref|ZP_07302116.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467392|gb|EFL30485.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 402

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 128/382 (33%), Gaps = 33/382 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P    WD+    P   +L +     G    +  R      R     +             
Sbjct: 28  PNASAWDREGGLP--RSLWKSFGAQGYLGLLHARGAGGGARDLFTSVVFLEELGRTGFGG 85

Query: 149 --GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +   +  +   +A   +P + +D+              AP         L +TE  
Sbjct: 86  LRAAVSVHAYMATHYLAAAGSPGLRRDYL-------------APAVDGERVAALAITEPG 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-----LVPRL 261
            G D++ +T+  ++  D            +   +D  ++  +     G        +  L
Sbjct: 133 TGADLSGLTTTAERDGDHFVVRGVKTMVSNGTGADFHVVAVRTSPDTGSGPHGTTGLSLL 192

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           + D    G+        +G R+  T  + + +       L+G  +     +     L  L
Sbjct: 193 VIDSGLPGITITATPT-LGWRAAGTATVAYEDVRVPADHLIGRADAGFYYLMRGLQLERL 251

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            +A +++ GM   L +       R + GG L +       +AD+A ++AAA  L    A 
Sbjct: 252 VAATLALGGMDRCLEDTRRCLTERRLFGGTLSELQAPAHRVADLATELAAARQLVHHTAW 311

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +++    + E         + K    ++A  +   +++  G  GY++    +R YR++ 
Sbjct: 312 LYEQGDLPATE-------CSMAKLHTTELACRMADASLQLQGAHGYLDSSDASRAYRDAR 364

Query: 439 ANSILLGSGNAMVLDVLNLLEK 460
           A ++  G    M   +   + +
Sbjct: 365 AATLAAGPSEVMRDLIARAVLR 386


>gi|297625448|ref|YP_003687211.1| crotonobetainyl-CoA dehydrogenase (crotonobetainyl-CoA reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921213|emb|CBL55763.1| Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 378

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 128/362 (35%), Gaps = 31/362 (8%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157
           E+   W   +      G    +    ++ +       + AA   L       H++   + 
Sbjct: 37  EYPERWVKAI---CDLGFDRILLPEEYDGLGLGW-QTLAAAYEALGRAGGPTHVLY-QLP 91

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V    T    KD    + S +               +   +TE   G+    +++ 
Sbjct: 92  GWDTVIREGTEEQKKDILKFVGSGKQM-------------LNYAMTEPSAGSSWDDMSTT 138

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277
             +    +Y L+GHK F++S M   ++++   +             D S  G+  + L +
Sbjct: 139 YSRKGGKVY-LNGHKTFITSSMKVPYLVVMARDADNMGTYTEWF-VDMSLPGITKEPL-H 195

Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R ++  ++ F N       L G              L   + A+ +      +  +
Sbjct: 196 KLGLRMDSCADIYFDNVELREEDLFGTEGNGFKRGVKDFDLERFEVAMTNYGTAYCAFED 255

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA +R   G  +  + +++   AD+ +DI     + + +A   D  +         R
Sbjct: 256 AAKYANQRVQGGEAIARKQLIQLKFADMKVDITNMRNMLYEIAWKADNDQ-------LGR 308

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
               + KY+C   A  V+  A++ + G G   E  + R YR+   + +  G+   M+L  
Sbjct: 309 GDCSMAKYYCSHAAARVVDNALQTLAGVGVTGEHRVQRFYRDLRVDRVSGGTDEMMILAA 368

Query: 455 LN 456
             
Sbjct: 369 GR 370


>gi|167588029|ref|ZP_02380417.1| AMP-dependent synthetase and ligase [Burkholderia ubonensis Bu]
          Length = 1279

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 80/418 (19%), Positives = 149/418 (35%), Gaps = 44/418 (10%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL     DRS+  +       +R  ++L  +    A  +   +      +     P + 
Sbjct: 664  QGLLGMPIDRSYGGLGLTHRDMLRVISQLAAIDSTLAFFVGLNNTLGILPIMRHAQPALR 723

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            ++  P + S               +     +TE   G+ + AITS+ Q+I  G + ++G 
Sbjct: 724  EELLPSLASG-------------RMLAAFAITEPAAGSHLRAITSRAQRIDTGDWLVTGT 770

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          G+     +  +G R      L 
Sbjct: 771  KSWSGSSAWAGIINVFAKQADGAGMVGLA---VRPGTPGVRIGAEELTMGVRGMIQNSLH 827

Query: 291  FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                     + LGD+       +    +  L  A +S+  M+        Y  RR +  G
Sbjct: 828  LDRARISDAYRLGDIGQGMPVAQHAMNIARLAIAAVSLGAMKRCAQLMHRYGARRRIGTG 887

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ +  + ++   I    A    LA   D   +  E+         I+K    ++
Sbjct: 888  LLLDNPLSRLRLGELRHRIDGLNAFVEHLAAELDLGVAVPEDCLL------ISKILGSEL 941

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 942  LSQSADEMMQFLGGRGYIETNLAPQIFRDARLTRIFEGPTETLLDHLGSRLLNGGD---D 998

Query: 468  LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525
            L   LE  LG+              L +E + L   L+E     ++A+ L  AG   +
Sbjct: 999  LLRYLENALGAGV------------LARELRRLGEQLSED--GLANASKLDGAGHAAV 1042


>gi|254821129|ref|ZP_05226130.1| FadE12_3 [Mycobacterium intracellulare ATCC 13950]
          Length = 412

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 111/356 (31%), Gaps = 28/356 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
            +  GL  S+  R    V     + H  R   L L   L+    +  +     M+    T
Sbjct: 72  WLRYGLPASLGGRDGSNVDMAVIREHLARK-GLGLHNDLQNESSIVGNFPQVIMMERFGT 130

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
               + W+  + + E              ++  GLTE + G+D   + +  ++  D  + 
Sbjct: 131 DEQRRVWSEALITGE-------------RSMAFGLTEPKHGSDATWLETHAERDGD-TWV 176

Query: 228 LSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           ++G K F +        ++ A+  G  G    +   L      G           N    
Sbjct: 177 INGSKRFNTGVHRATHDLVFARTSGEPGGARGITAFLVPTDTPGFDVPYYWWTF-NMPTD 235

Query: 286 TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
             E+E ++       +LG+++      +       +  A  S+   +  +  A  YA  R
Sbjct: 236 HGEVELTDVRVPADAVLGEVDRGLEVAQTFLHENRIRQAASSLGAAQYCIDRAAEYAGGR 295

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
            V G  L     ++  +A++  +      L    A   D                 +  Y
Sbjct: 296 TVFGKPLSVNQAVQWPLAELQTEAQMVRLLVQYAAWHLDRDHHME-----VSDKVSMANY 350

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
              ++       AM+  GG GY         YR      I  G+    +  V   L
Sbjct: 351 RANRLVCDAADRAMQIFGGLGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRL 406


>gi|33595262|ref|NP_882905.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822]
 gi|33565339|emb|CAE36142.1| acyl-CoA dehydrogenase [Bordetella parapertussis]
          Length = 388

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 128/354 (36%), Gaps = 28/354 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           +   RR    G+    + +               A +  M           S       A
Sbjct: 39  YDTWRRLAELGVINMNFPQDCGGSE---------AGMLAMCLAVEEVCYHDSSYGPVFTA 89

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKIS 222
             T  R    +A +    ++      P+ +        LTE    +  AA   +  ++  
Sbjct: 90  QQTCCRHILRYANEPQRSQWIEEYVLPISRGVAFGATALTEPNSSSSDAASMSTFARRDG 149

Query: 223 DGIYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           D  + ++G+K + ++     +   I+ A V+ +     +   L      G       +K+
Sbjct: 150 DE-WVINGNKMYSTAAGLEGAKFVIVWAIVDKQTRKSGL--FLVPYGTPGFTVGSKLHKM 206

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVE-----DMKILIYLDSAIMSVSGMRVSLAE 334
           G R+  T EL F++        LN            D +    L  A  ++   R  L +
Sbjct: 207 GMRAADTRELFFTDCRIPAAHILNGGAAGQASPFKSDTQYHSKLFLASNAIGLQRYCLDQ 266

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           AI +A++R   G  L ++  ++  IA++  DI  +T L  R A  ++     + ++A   
Sbjct: 267 AIDFAKQRKTWGVPLSERQRIQGWIAEMVADIQISTLLRDRAAVLYEAGTLSAADSA--- 323

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
               I KY   + A      A E  GG GY++   ++R YR++   +I+ G   
Sbjct: 324 ----ILKYVSAENAVKASHYASEIFGGMGYMDGVGVSRRYRDAKGLTIIQGGST 373


>gi|269126324|ref|YP_003299694.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311282|gb|ACY97656.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 407

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 133/381 (34%), Gaps = 48/381 (12%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL---------EA 148
              P    L   +   GL        F P  ++ AH +       +A++         EA
Sbjct: 46  VVPPVVEELKAEARKRGLWNL-----FLPDCQEPAHGLTVTDYASLAEVTGRSPHLAPEA 100

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-G 207
            +  +P   +  ++ +  TP   + W               P+ +  +     +TE    
Sbjct: 101 TNCAAPDTGNMEVLHMFGTPEQKERWL-------------RPLMEGQIRSAFAMTEPDVA 147

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVG-CFLVPRLLE 263
            +D   I+++ ++  D  Y ++G KW+++    P     I++ + + +         +L 
Sbjct: 148 SSDARNISTRIERDGDH-YVINGRKWWITGVADPRCKIMIVMGKTDPQGHPYRQQSMVLV 206

Query: 264 DGSPNGLCYQRLKNKIGNRSNA-TVELEFSNTFGFLLGDLNVSTGPVEDMKILI------ 316
                G+   R     G        E+ F++    +    N+     +   I        
Sbjct: 207 PMDTPGVEVIRPLPVFGYYDQHGHCEITFTDVRVPV---ENLIGNEGDGFMIAQARLGPG 263

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            +   + ++     +L      A  R   G  L +Q V+++ IA+  + I  A  L+ + 
Sbjct: 264 RIHHCMRALGAAERALELMCQRAVSRVAFGKTLAEQGVVQQQIAESRMAIEQARLLTLKT 323

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
           A   D+   ++     AR      K    ++A  V+  A++  GG+G  ++  +AR Y  
Sbjct: 324 AWMIDKYGVKA-----ARSEVAAIKVVVPRVALQVVDRAIQVHGGAGVSDDTPLARMYAS 378

Query: 437 SPANSILLGSGNAMVLDVLNL 457
                I  G  +  +  V   
Sbjct: 379 LRTLRIADGPDDVHIRSVARA 399


>gi|257140755|ref|ZP_05589017.1| AMP-binding domain-containing protein [Burkholderia thailandensis
            E264]
          Length = 1299

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 135/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  A+L  +    A  +   +      + L   P + 
Sbjct: 690  EGLLGMQIDRAYGGLGFTNREMLQVVAQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 749

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSG 230
             +  P + +                     LTE   G+++ AITS  Q+   D       
Sbjct: 750  DELLPLLATG-------------RTLAAFALTEPAAGSNVRAITSVAQRVDGDQWLVSGQ 796

Query: 231  HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
              W  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 797  KSWSGSSAWAGVINVFAKQADGAGMVGLA---VRQGTPGLRIGAEDLTMGVRGMIQNTLH 853

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 854  LDRARVSDACRLGSPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 913

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ I D+   I   +AL  +LA  FD  ++  E+         I K    + 
Sbjct: 914  LLLDHPLARQRIGDLRHRIDGLSALIEQLAADFDAGRAAPEDGLL------IAKILGSEC 967

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 968  LSQTSDELMQILGGRGYIETNVAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1027

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1028 YLGERTGAGALAAELRGLGEQLLGEGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1086


>gi|167616827|ref|ZP_02385458.1| non-ribosomal peptide synthetase [Burkholderia thailandensis Bt4]
          Length = 1293

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 135/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  A+L  +    A  +   +      + L   P + 
Sbjct: 684  EGLLGMQIDRAYGGLGFTNREMLQVVAQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 743

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSG 230
             +  P + +                     LTE   G+++ AITS  Q+   D       
Sbjct: 744  DELLPLLATG-------------RTLAAFALTEPAAGSNVRAITSVAQRVDGDQWLVSGQ 790

Query: 231  HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
              W  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 791  KSWSGSSAWAGVINVFAKQADGAGMVGLA---VRQGTPGLRIGAEDLTMGVRGMIQNTLH 847

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 848  LDRARVSDACRLGSPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 907

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ I D+   I   +AL  +LA  FD  ++  E+         I K    + 
Sbjct: 908  LLLDHPLARQRIGDLRHRIDGLSALIEQLAADFDAGRAAPEDGLL------IAKILGSEC 961

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 962  LSQTSDELMQILGGRGYIETNVAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1021

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1022 YLGERTGAGALAAELRGLGEQLLGEGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1080


>gi|269126709|ref|YP_003300079.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311667|gb|ACY98041.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 397

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 112/366 (30%), Gaps = 35/366 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R++  +GL      +            +    +   ++     L + ++  + M+  
Sbjct: 44  DLQRQAKREGLWALGHPKELGGGGLPFLDYVYVNEVQGRSEFGQLALGTFTLQDSLMLHR 103

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISD 223
             +P   + +   +   E  P                +TE     +D   +T+      D
Sbjct: 104 HASPAQRERYLKPLVQAEIYP-------------SFAMTEPGISSSDPTQLTTTATLEGD 150

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV--PRLLEDGSPNGLCYQRLKNKIG 280
             + + G KWF + +  +    ++ + E       +    +L      G    R    +G
Sbjct: 151 E-WVIRGRKWFTTLADRAAYTTVMCRTEPEGTPPHLAFSMILVPTDTPGYTIVRDTPVLG 209

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIM-----SVSGMRVSLAE 334
                  E+ + +         N+         I    L    +      +   + +   
Sbjct: 210 LDGGH-CEVIYDDVRVPA---ENLLGPRGHGFVIAQERLGPGRIFHCMRWLGQAQRAFDL 265

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
                  R   GG L D+ +M++ + D   +I AA  L+   A+  D           AR
Sbjct: 266 MCARLHERSAFGGPLADKQLMQQHVFDSYAEIQAARMLTLHAAHRIDAGDQ-------AR 318

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
           +     K    +M   VI  A++  G  G   +  +   YR + A  I  G     +   
Sbjct: 319 VEIGAIKVVGARMLHNVIDRAIQVYGAEGLTGDTPLEHMYRHARAARIYDGPDEVHITTT 378

Query: 455 LNLLEK 460
              + K
Sbjct: 379 ARRILK 384


>gi|114797288|ref|YP_761370.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
 gi|114737462|gb|ABI75587.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 43/388 (11%)

Query: 69  TAQELARMANYNTPQLHAYG-PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
             Q   R A   T  L  +      + D+    P            G     +   +   
Sbjct: 9   EDQAAIRDAVAKT--LEPFDDAYWAKTDETGNWPE--EFCNAMAKGGWLGIAFPEEYGGA 64

Query: 128 VRKQAHKIRAARLYLM-----AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
                    AA +        A       +  ++     +     P + ++  PKI S E
Sbjct: 65  GLG---LTEAALMMQTVTRTGAGYSGASAIHLNIFGPKPLEKFGNPELKRESLPKIISGE 121

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SD 241
                          +   +TE   G D +++ ++ ++ + G Y + G K + +    +D
Sbjct: 122 -------------EKMCFAVTEPNSGLDTSSLETKAERTNTG-YMIHGRKIWTTGAQRAD 167

Query: 242 AFIMLAQVEGRVGC----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
             +++A+   +  C      +     D + N +    +  K+G ++     L        
Sbjct: 168 KILIIARTTPKDQCAKPYMGLSLFYTDLNRNKIEANVIP-KMGRKAVECNTLFIDGLEVP 226

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
              L+G+       +        +  A+ SV     +L  A  YA  R V G  +     
Sbjct: 227 KEHLIGNEGDGFKYLLQGLNPERVLFAVESVGLGFAALERATRYANERVVFGRPIGQNQG 286

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   +A    +++AA  L+++ A+ +D  +    EA  A+ +     +  C+ A      
Sbjct: 287 IAHPLAKSWAELSAAELLAYKAASLYDAGQDCGAEANAAKYLGTEAGFTACETA------ 340

Query: 415 AMECIGGSGYIEERSIARHYRESPANSI 442
            +   GG GY +E  + R  RE+    I
Sbjct: 341 -VLTHGGMGYAKEYHVERMMREAMLARI 367


>gi|187921241|ref|YP_001890273.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187719679|gb|ACD20902.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 387

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 115/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +      G   ++  + F                   A       
Sbjct: 29  RKIDEARGYPE--EFVDALTKAGWLAALIPQDFGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + PKI   +                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSEEQKQKYLPKIACGDLR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +  ++  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TKIKTTAERRGDRYVINGQKVWISRVQHSDLMILLARTTPLADVKKKSEGMSIFIVDLRE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGHGMTVQPILN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFKYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   YA+ R V G  +     ++  IA   +++ AA+ + F  A  FD
Sbjct: 251 AECIGDGYWFVDKVTEYAKERVVFGRPIGQNQGVQFPIARSFVNVEAASLMRFEAARRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 AHQPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|295396993|ref|ZP_06807111.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
 gi|294974774|gb|EFG50483.1| acyl-CoA dehydrogenase [Aerococcus viridans ATCC 11563]
          Length = 401

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 110/305 (36%), Gaps = 31/305 (10%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDG 224
            +P   + + PK+ S               +     LTE   G+D+A  + +  ++  D 
Sbjct: 122 GSPEQVQKYIPKLASH-------------QLRTCFALTEPNHGSDVAWGLETSARREGDK 168

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  +W   + ++D   + A+ E  G+  CF+V          GL    ++NKI  +
Sbjct: 169 WIINGEKRWIGGASVADVIPVFARDEETGKPKCFIV-----QAGQAGLDIDVIQNKIALK 223

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +   +        L       +  K+L       A M+   M  +L  ++ Y  
Sbjct: 224 IVPNANIHLKDVEVAESDRLQNINSFKDIAKVLYSTRAGVANMATGAMAGALQASLKYVT 283

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  + +  +++  +A +  ++ AA AL  ++A          EE  Y  ++  + 
Sbjct: 284 ERKQFGKEISNYQLVQEKLAMMQGNLTAAMALCSQIARQ-------QEEGDYNEVVTSVG 336

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K          +A      GG+G + +  IAR + ++ A     G+     L +   L  
Sbjct: 337 KMMNALRLRETVAMGRGICGGNGIVVDNDIARFFADAEAVYTYEGTHEVNALVIGRALT- 395

Query: 461 GTNLF 465
           G   F
Sbjct: 396 GQAAF 400


>gi|254296707|ref|ZP_04964161.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
 gi|157806688|gb|EDO83858.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e]
          Length = 1291

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|83717455|ref|YP_440124.1| AMP-binding domain-containing protein [Burkholderia thailandensis
            E264]
 gi|83651280|gb|ABC35344.1| AMP-binding domain protein [Burkholderia thailandensis E264]
          Length = 1323

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 136/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  A+L  +    A  +   +      + L   P + 
Sbjct: 714  EGLLGMQIDRAYGGLGFTNREMLQVVAQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 773

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSG 230
             +  P + +                     LTE   G+++ AITS  Q+   D       
Sbjct: 774  DELLPLLATG-------------RTLAAFALTEPAAGSNVRAITSVAQRVDGDQWLVSGQ 820

Query: 231  HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
              W  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 821  KSWSGSSAWAGVINVFAKQADGAGMVGLA---VRQGTPGLRIGAEDLTMGVRGMIQNTLH 877

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 878  LDRARVSDACRLGSPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 937

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ I D+   I   +AL  +LA  FD  ++  E+         I K    + 
Sbjct: 938  LLLDHPLARQRIGDLRHRIDGLSALIEQLAADFDAGRAAPEDGLL------IAKILGSEC 991

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG-SGNAMVLDVLNLLEKGTNLFE 466
                  E M+ +GG GYIE     + +R++    I  G +   +      LL  G +L  
Sbjct: 992  LSQTSDELMQILGGRGYIETNVAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1051

Query: 467  QL-----FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
             L        L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1052 YLGERTGAGALAAELRGLGEQLLGEGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1110


>gi|53721523|ref|YP_110508.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei K96243]
 gi|254263364|ref|ZP_04954229.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
 gi|52211937|emb|CAH37942.1| putative non-ribosomal peptide synthetase [Burkholderia pseudomallei
            K96243]
 gi|254214366|gb|EET03751.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a]
          Length = 1291

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1074


>gi|121609208|ref|YP_997015.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121553848|gb|ABM57997.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 390

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 123/284 (43%), Gaps = 21/284 (7%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKW 233
             +  SR    T  AP+   +    + +TE   G+D A + ++    +    + + G K 
Sbjct: 102 LHRHASRRLCDTYLAPILDGAAIGAICVTETNVGSDSAGMETRMVFDAKTNEWVIDGFKR 161

Query: 234 FLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           ++S+  ++D +I+       +    +  +   G   G+ + R    +G R +   E+EF 
Sbjct: 162 YISNASVADVYIVY-----GMASAGMTAIAVPGHAPGIRFPRNYTFMGRRGSLVGEVEFK 216

Query: 293 NTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           +       LLG+    +  +  M     +      +   R +   A+ +A++R   G  L
Sbjct: 217 DCRVSAEHLLGEPGGGSRIMRGMFNFERVILGGSGLGVARSAFDIAVAHAQQRQSFGQAL 276

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCK 406
             + ++   IA ++  I AA  L++R +  +D   + K+  +EAA A+++A  T  +C  
Sbjct: 277 GCKQLIWDKIAQMSWRIDAAELLTYRASKMYDAGSDGKALMKEAAMAKLVATETANFC-- 334

Query: 407 MAPAVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNA 449
                  E ++ +GG G  +E     + YR++ A +I+ G+   
Sbjct: 335 -----ANETVQILGGDGITKEFGRAEQIYRDARALTIVGGTSEM 373


>gi|33591822|ref|NP_879466.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|33571465|emb|CAE44951.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I]
 gi|332381239|gb|AEE66086.1| acyl-CoA dehydrogenase [Bordetella pertussis CS]
          Length = 391

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 131/383 (34%), Gaps = 36/383 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--- 148
              D+ +  P      +     GL      +                         A   
Sbjct: 29  HDLDRRKAFP--QECWQAICDAGLAGVALPQEHGGSGLGMLDLALIVEELSAGGGGATLG 86

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
              M   +     ++   + ++ ++  P +   + +               + LTE   G
Sbjct: 87  QLFMINPIFGGVPISKFGSEQMKRELLPALVGGKMN-------------FCMALTEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-FIMLAQ----VEGRVGCFLVPRLLE 263
           T+  A+ S  +    G + L+G K ++++  +    +++ +     EG      +   + 
Sbjct: 134 TNTLAMKSYAEAEPGGGWRLNGRKIWITAVDAAQKMLVVVRTSRQTEGARPSDGISMFII 193

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS 320
           D    GL Y  + +K+G ++ +   + F N       L+G L+     + D+     + +
Sbjct: 194 DVEREGLSYSAI-DKVGTQTLSACSVFFDNVRIEPHELVGTLDKGFRELLDVLNTERIVT 252

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
               +   R++   A+ YA  R V  G  +     ++  +A    ++  A  ++ + A  
Sbjct: 253 TASLIGAGRLAKRLAVQYANDRKVFGGKPISSYQGLQFPLAQSHAELQCARLMNLKAAAL 312

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D+      E       A I K    + A   I  +M+ +GG GY  E  + R + ++  
Sbjct: 313 CDQRLPYGTE-------ANIAKLIGSQAASHAIERSMQTMGGMGYAREFHVERLWSDARL 365

Query: 440 NSILLGSGNAMVLDVLNLLEKGT 462
                     M+L+ + + + G 
Sbjct: 366 FK-FAPVSEEMILNYIAIHDLGM 387


>gi|24940605|gb|AAN65232.1|AF329398_22 putative acyl-CoA dehydrogenase [Streptomyces roseochromogenes
           subsp. oscitans]
          Length = 376

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 119/356 (33%), Gaps = 28/356 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMT 166
           +   G+                         +     +   A  + +  +   +++    
Sbjct: 40  AAELGMTGLCLPTEHGGGGLGALDTALCLEAFCAGGADTGLAFGIAAHLLACGTVLTDHA 99

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
              V  +    + S              +V     +TE   G+D++ + +     SD  Y
Sbjct: 100 GDPVRAELLRGLTSG-------------TVIAANAMTEDDAGSDLSRLATTAVADSD-SY 145

Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
            L+G K F+S+ P++D FI  A      G   +       +  GL       K+G    A
Sbjct: 146 VLNGKKSFVSNAPLADVFITYAATTPSAGYLGMSAFAVPRTLPGLRINSPLAKMGLNGCA 205

Query: 286 TVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
             ++EF++      +LLG  N      +   I        + +  M V LA+ + +A+ R
Sbjct: 206 AAQVEFTDCKVPGRYLLGPENQGNSIFQRSMIWERACLPAIYLGAMEVQLAQCVDHAQSR 265

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +     +   +A + L +  +  L +R     D+ +S  E  A A+        
Sbjct: 266 RQFGRSIGTFQAISHRLATMKLRLETSRLLLYRACWYLDQGRSAVEAVALAKTAVAEAA- 324

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  A   +A++  G  GY+    I +  + +   +I  G+       V   +
Sbjct: 325 ------VANALDAVQVFGARGYLAADGIGQQLQNAIPLNIFSGTTEIQREVVARSM 374


>gi|118466732|ref|YP_883172.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254776442|ref|ZP_05217958.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118168019|gb|ABK68916.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 401

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 23/278 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   +      G+  +RL+ K+G + + T  + F N        L      +E+ 
Sbjct: 184 KGRPAIKSFIVPRDHPGVTVERLEKKLGIKGSDTAAIRFDNVRIPKENLL--GNPEIEEG 241

Query: 313 K----ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIA 360
           K    ++   D+    V+ M V +A A     R+ ++              Q        
Sbjct: 242 KGFSGVMETFDNTRPIVAAMAVGVARAALEEIRKILTDAGVEISYDKPAHVQSAAAAEFL 301

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  +A  LS R A   D     S+EA+ ++  A        +MA  V  + +E  G
Sbjct: 302 RMEADWESAYLLSLRAAWQADNKIPNSKEASMSKAKAG-------RMATDVTLKTVELAG 354

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 355 TAGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRL 392


>gi|41409287|ref|NP_962123.1| FadE23 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398107|gb|AAS05737.1| FadE23 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 401

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 23/278 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
            G   +   +      G+  +RL+ K+G + + T  + F N        L      +E+ 
Sbjct: 184 KGRPAIKSFIVPRDHPGVTVERLEKKLGIKGSDTAAVRFDNVRIPKENLL--GNPEIEEG 241

Query: 313 K----ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIA 360
           K    ++   D+    V+ M V +A A     R+ ++              Q        
Sbjct: 242 KGFSGVMETFDNTRPIVAAMAVGVARAALEEIRKILTDAGVEISYDKPAHVQSAAAAEFL 301

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  +A  LS R A   D     S+EA+ ++  A        +MA  V  + +E  G
Sbjct: 302 RMEADWESAYLLSLRAAWQADNEIPNSKEASMSKAKAG-------RMATDVTLKTVELAG 354

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 355 TAGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRL 392


>gi|94312827|ref|YP_586036.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
 gi|93356679|gb|ABF10767.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34]
          Length = 389

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 119/360 (33%), Gaps = 34/360 (9%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W ++E H A+    ++   H G   ++   ++                 +          
Sbjct: 30  WQRIEEHSAFPEEFVQALTHAGWLSALIPEAYGGSGLPLT-AASVIMEEINRNGGNSGAC 88

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              +     +    +    + W P I S E                 + +TE   GTD  
Sbjct: 89  HGQMYVMGCLLRHGSEAQKQRWLPGIASGELR------------MQSMAVTEPTTGTDTT 136

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED---G 265
            + +   +  D         W      SD  ++LA+       +     +   + D    
Sbjct: 137 KLKTTAVRRGDKYVINGQKVWISRVQHSDLMLLLARTTPLDQVKKKSEGLSVFVVDLREA 196

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             NGL  Q ++N + N    T EL F N       L+G+       + D      +  A 
Sbjct: 197 IGNGLTVQPIRN-MVNH--ETNELFFDNLEIPAENLIGEEGKGLKYILDGLNAERILIAA 253

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +      +  A  YAR R V    +     ++  IA   +++ AA+ + ++ A  FD 
Sbjct: 254 ECIGDGYWFVERASSYARERIVFDRPIGQNQGVQFPIARSFVNVEAASLMRYKAAQLFDA 313

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            K   +EA  A+++A    +             ++  GG G+  E  I R +RE+    +
Sbjct: 314 GKPCGKEANMAKLLAADASW-------EAANVCLQTHGGFGFAAEYDIERKFRETRLYQV 366


>gi|134282938|ref|ZP_01769640.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
 gi|134245586|gb|EBA45678.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305]
          Length = 1293

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 682  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 741

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 742  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 788

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 789  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 845

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 846  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 905

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 906  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 959

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 960  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1019

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1020 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1078


>gi|73663734|ref|YP_302515.1| acyl-CoA dehydrogenase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72496249|dbj|BAE19570.1| putative acyl-CoA dehydrogenase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 402

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 31/299 (10%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDG 224
            +      + PK+ S E             +     LTE   G+D+A  + +  ++  D 
Sbjct: 122 GSKEQQAYYLPKLQSHE-------------LRTCFALTEPEHGSDVAGGLETTAKRDGDK 168

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                  KW   + ++D   + A     G+   F++     + S  G+    ++NKI  R
Sbjct: 169 WIINGQKKWIGGANVADVIPVYAVDVETGKPKGFII-----EPSQEGVEIDVIENKIALR 223

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYAR 340
                 +  +N        L       +  ++L       A M+   M  +L     Y  
Sbjct: 224 IVPNTNIHLNNVVVKEEQRLQNINSFKDIARVLYSTRAGVAYMATGAMAGALKATTDYVT 283

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           +R   G  +    +++  +A +  ++A A A   +LA      +      + A++M  + 
Sbjct: 284 KRKQFGKEISKFQLIQEKLAMMQGNLAQAMATCAQLARMQANGEYDEVATSTAKMMNAL- 342

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIE-ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                      +A      GG+G +  E  IAR + ++ A     G+     L +   L
Sbjct: 343 ------RLRESVAMGRGVHGGNGILAGEYDIARFFADAEAIYTYEGTHEINALVIGRAL 395


>gi|262372653|ref|ZP_06065932.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
 gi|262312678|gb|EEY93763.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205]
          Length = 399

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   +  D  Y L+G K F++S   +D+ ++ A ++ +
Sbjct: 124 KGTWAAMAITEPGCGSDSAAIRTTATQDGDE-YILNGEKIFVTSGDRADSVVVWATLDKK 182

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 183 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFIDCRVPAANLLGNPEIDVAKG 242

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV------------- 354
                 ++   D+    V+ M +  A+A   +  R      +    +             
Sbjct: 243 FA---GVMETFDNTRPLVAAMAIGCAKA---SLERI---KEIFKDQLDPDYKTPYLQTSN 293

Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
           +   I  +  +  AA  L  +     D  K  S+E       A I K    ++   +  +
Sbjct: 294 LAAQIYRMEAEWEAARLLMVKSTWMADNKKPNSKE-------ASIAKAKAGRVGNEITLK 346

Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +E     GY E+  + +  R+S    I  G+     L +   
Sbjct: 347 CVELAASVGYGEDELLEKWARDSKILDIFEGTQQIQQLIIARR 389


>gi|163797872|ref|ZP_02191816.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
 gi|159176834|gb|EDP61402.1| acyl-CoA dehydrogenase-like protein [alpha proteobacterium BAL199]
          Length = 396

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 124/366 (33%), Gaps = 36/366 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
           GP     D+   +P     ++     G    +    +            A    +     
Sbjct: 33  GPYWREKDRERAYPT--EFVQALTEAGYLAVLIPEEYGGSGL-GIRAAGAILEEIHKSGC 89

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
            G      +     +    +    + W P I S E                  G+TE   
Sbjct: 90  NGAACHAQMYIMGTLLRHGSEEQKRKWLPGIASGELR------------LQAFGVTEPTS 137

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLL 262
           GTD  ++ +  +K+ +  Y ++G K + S +  SD  ++LA+   +         +   +
Sbjct: 138 GTDTLSLRTTAKKVGNEHYVVNGQKIWTSRAEHSDLMLLLARTTAKDQVAKRTEGLSVFV 197

Query: 263 EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
            D      NGL  + +   + N S  T E+ F +       L+G+       + D     
Sbjct: 198 VDMREAVGNGLTIRPI-RAMVNHS--TTEVFFDDLKVPAENLIGEEGKGFRYIIDGMNAE 254

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
            L  +  S+   R  +  A  YA+ R V G  +     ++  IA    +  AA  ++ + 
Sbjct: 255 RLLISHESLGDARWFIRTATEYAKAREVFGRPIGQNQGVQFPIARAFAETEAAALMAEKG 314

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              F+ +K    EA  A+++A                  M+  GG  + EE  + R +RE
Sbjct: 315 VRLFEGSKPCGAEANMAKMLAAEAA-------WHAAEACMQTHGGFAFAEEYDVERKFRE 367

Query: 437 SPANSI 442
           +    I
Sbjct: 368 ARLYQI 373


>gi|16125362|ref|NP_419926.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221234104|ref|YP_002516540.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13422420|gb|AAK23094.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220963276|gb|ACL94632.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 387

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 117/364 (32%), Gaps = 45/364 (12%)

Query: 100 HPAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149
            P W  L R               GL   +    +                 + A     
Sbjct: 25  PPYWRGLDREKAYPTDFVAAMTKAGLLGVLIPEEYGGGGLGLTAAAAILE-EVHASGGNA 83

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +   + +   V    +    + W P+I                      G+TE   GT
Sbjct: 84  AALHAQMYTMGTVLRHGSTAQKETWLPRIADGSIR------------LQAFGVTEPTAGT 131

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED 264
           D  +I++  ++  D  Y ++G K + S +  SD  ++LA+   +         +   L D
Sbjct: 132 DTTSISTFARREGD-TYVINGQKVWTSRAEHSDLMVLLARTTPKDQVTRKADGLSVFLVD 190

Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
                  GL  + +   + N +  T E+ F N       L+G+       + D      +
Sbjct: 191 MRAALGQGLTIKPIATML-NHA--TTEVFFDNLVIPADSLIGEEGKGFRYILDGMNAERI 247

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
                 +      + +A  YA  R V G  +     ++  IA       AA    +  A 
Sbjct: 248 LIGAECLGDAAWLIGKARDYANSRVVFGRPIGQNQGVQFPIARAYAQTHAARLTIYDAAA 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +   E+A   +++A    +    M        ++  GG G+ EE  I R +RE+ 
Sbjct: 308 RYDAGQPCGEQANIGKMLASEASWAAADM-------CLQTHGGFGFAEEYDIERKFRETR 360

Query: 439 ANSI 442
              +
Sbjct: 361 LYQV 364


>gi|218779694|ref|YP_002431012.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761078|gb|ACL03544.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 406

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/420 (14%), Positives = 142/420 (33%), Gaps = 47/420 (11%)

Query: 53  VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112
            + +E     + V+   + EL ++A+   P+            +V   P +  ++++   
Sbjct: 16  ALKRETHKFAKEVMRPASIELDQLAD---PE------------EVIKSPVYWNVMKKGYE 60

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G H      ++  +                        +      A   +++ T ++  
Sbjct: 61  LGYHSIFIPDTWGGMGLDPLDVHIVLEELGWGAGGMAIGLCVGCFPAFFSSMVPTDKLID 120

Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS------------QGQK 220
           D        +            S     G+TE   GTD  +  +            + + 
Sbjct: 121 DVILPFCECD----------DASFIGCWGITEPEHGTDTLSPGTEMFSNPDISCDVKARL 170

Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
             D          ++S+  ++   +    +E  +G       +      G+   +  +K+
Sbjct: 171 DGDEWVISGQKSAWVSNGTVATHCLCFLTIEPSMGMAGGGICVIPTDLPGVRKGKPLDKM 230

Query: 280 GNRSNATVELEFSNTFGFL-LGDLNVSTGPVEDMKILIYLDSAIMSV--SGMRVSLAEAI 336
           G R     EL F N         ++           L   ++++ ++     R +   A+
Sbjct: 231 GQRDLNQGELYFDNVRIPRDYMMVDQEAYDGILDLTLATANASMGAIFTGVARSAFDLAL 290

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y+++R   G  +    ++K  +  + + + AA ALS               E + A   
Sbjct: 291 DYSKKRVQGGKPIFQHQMIKHKLFSMFMKVEAARALSRAAFVYNLNNSPPLTEYSIA--- 347

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +K +C + A  V  +A++  GG G  +E  I + +R++ A+ I  G+ + +++   +
Sbjct: 348 ---SKVFCTQTALEVANDAVQIFGGVGLSKEYPIEKIFRDARASLIEDGANDTLMITAAH 404


>gi|114798494|ref|YP_759536.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114738668|gb|ABI76793.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 446

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 110/386 (28%), Gaps = 24/386 (6%)

Query: 95  DKVEFHPAWHALLRRSIH-DGLHCSIWD---RSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           D   F        R     +GL    W+   R  +    K  H   A       Q     
Sbjct: 32  DNERFFDHRREWARTDFENEGLPRPEWEALLREAKKRADKAGHLRYALPKEFGGQDGTNL 91

Query: 151 LMSPSVTSASMVALMTTPRVHKD----------WAPKIFSREYDPTNKAPMQKTSVAIGL 200
            M+      +   L     +  +             + F+R           +       
Sbjct: 92  GMAIIREHFARQGLGLHNDLQNEHSIVGNFPQILMLRDFARPDQKHLATAALEGKFIACF 151

Query: 201 GLTEKRGGTDIAAITSQGQK---ISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-C 255
           GLTE   G+D   + ++  +        + ++G K +++       I +  +  G+ G  
Sbjct: 152 GLTEPHHGSDATHMETRAVRHKKDGKDGWLINGEKMWITGMHVATHIMLFCRTSGKDGDA 211

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDM 312
             +  L+      G+  +       N       L   + +                 +  
Sbjct: 212 KGITCLIIPARDPGVIIEEYMWTF-NMPTDHPRLTIKDVWVPEDAVFGPPEGGLALAQHF 270

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +  A  S       + E++ YA  R   G  L     ++  + ++A        L
Sbjct: 271 VHENRIRQAASSCGAALYCINESVKYALERKPFGKPLATNQAIQFPLVELATQAEMLRLL 330

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            F+ A   D+  S+ E A        +  Y+  ++       AM+  GG GY   +    
Sbjct: 331 IFKTAWEMDQ-MSKPEVAIKLSDKVSMCNYYANRLVCEAADRAMQVHGGIGYSRHKPFEH 389

Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458
            YR      I  GS    +  V   +
Sbjct: 390 IYRHHRRYRITEGSEEIQIRKVAGHM 415


>gi|301630658|ref|XP_002944433.1| PREDICTED: acyl-CoA dehydrogenase-like [Xenopus (Silurana)
           tropicalis]
          Length = 402

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 125/375 (33%), Gaps = 44/375 (11%)

Query: 89  PGGERWDKVEFHPAWHAL--LRRSIHDGLHCS----IWDRSFEPVVRKQAHKIRAARLYL 142
               R    EF  A+      +R+  +    +     W  +  P     A         +
Sbjct: 28  RDAIRALCAEFPDAYFREVDAQRAYPEAFVNALTQAGWLAALIPQEYGGAGLGLTEASVI 87

Query: 143 MAQLEAGH----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
           M ++             + +   +    +    + + PKI S E+               
Sbjct: 88  MEEINRCGGNSGACHGQMYNMGTLLRHGSKAQQEKYLPKIASGEWR------------LQ 135

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RV 253
            +G+TE   GTD   I +   K  DG Y ++G K ++S    SD  I+LA+         
Sbjct: 136 SMGVTEPSTGTDTTRIKTSAVKK-DGRYVVNGQKVWISRVQHSDWMILLARTTPLAEVTK 194

Query: 254 GCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307
               +   + D       GL  + + N + N    T EL F N       L+G       
Sbjct: 195 KSEGMSIFMVDLRAAEKQGLTVRPIPN-MVNH--ETNELFFENLEIPEENLIGAEGKGFK 251

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            + D         A   +      L     Y R R V G  +     ++  IAD  +++ 
Sbjct: 252 YILDGLNAERTLIAAECIGDGYWFLDRVTRYVRERQVFGRPIGQNQGVQFPIADAFIEVE 311

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           AA  + ++    FD  +S   +A  A+ +A    +             ++  GG G+  E
Sbjct: 312 AANLMRWKACELFDAHQSMGAQANMAKYLAAKASW-------EAANACLQFHGGFGFACE 364

Query: 428 RSIARHYRESPANSI 442
             + R +RE+    +
Sbjct: 365 YDVERKFRETRLYQV 379


>gi|322698381|gb|EFY90152.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 530

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 98/479 (20%), Positives = 186/479 (38%), Gaps = 79/479 (16%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVH 171
           +  + +D  +    R     ++  R +L     A      ++   +   L      P++ 
Sbjct: 1   MVATGYDTPYGAFSRP----LQFLRSHLWVGSCANVGCPSAMQDGAACLLRGHLSQPKLS 56

Query: 172 KDW--APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI---- 225
                A +    +      +   K +   G  +TE+ GG+D++   +      +G     
Sbjct: 57  ASLSVAERKVFTDAYRRLTSRDPKYAWTSGQWMTERTGGSDVSLTETVATYQPEGASGFA 116

Query: 226 ----------YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED---------- 264
                     + ++G KWF S+  S+  ++LA+   G +  FL P    D          
Sbjct: 117 SKHGQIPLGPWSINGFKWFSSATDSEMTVLLARTAAGGLSTFLAPMRKHDPEATTLTGEP 176

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                + NG+  QRLKNK G +S  T EL   N  G+++G        +  +  L  + S
Sbjct: 177 KDDGRALNGVRIQRLKNKFGTQSLPTAELVLENMRGWMIGQEGRGIHEISTILTLTRVHS 236

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIALDIAAATALSFR 375
           A+ +V G+   L  A  YA  R V  G      L+D P+  R +A I+ +      ++F 
Sbjct: 237 AVAAVGGVGRGLGIARAYALVRDVGAGNRKRMRLVDSPLHMRTLAKISAEYRRLMLVTFY 296

Query: 376 LA-------NSFDEAKSRSEEA---------AYARIMAPITKYWCCKMAPAVIAEAMECI 419
            +       +S D     + EA            R+M+ + K + CK +  ++   ME +
Sbjct: 297 TSYVLGVSEHSLDARPPPALEALTPQKKLVEPLLRVMSQLAKAYVCKHSVELLFSCMEAL 356

Query: 420 GGSGYI----EER-SIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFEQLFST 471
           GG GY+    +E  +I+R YR++    I  G+ + +  D++  ++    G +    L   
Sbjct: 357 GGVGYLVNEEQEYLNISRIYRDACVLPIWEGTTDVLCTDLIRAMKHARGGADSLAALDEV 416

Query: 472 LEQDLGSSGK----------KVITILRDSISLCKEDK--GLARFLTEKIALASSAAALY 518
           + +  G  G+          +    L+  I   ++    G AR +  ++    ++  LY
Sbjct: 417 VGKAWGFEGRVGRPPGWQPVETWAALKSKIEGTEQADLMGEAREVVWQLGDVLASLLLY 475


>gi|209515559|ref|ZP_03264424.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
 gi|209504026|gb|EEA04017.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160]
          Length = 388

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 121/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                R D    +P   A +      G   ++  + +         +       +     
Sbjct: 26  DEYWRRIDHERVYPE--AFVDALTKAGWMAALIPQEYGGSGLGLT-EASVIMEEINRNGG 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    +    + + PKI S E                 + +TE   
Sbjct: 83  NSGFCHGQMYNMNTLLRNGSEAQKRKYLPKIASGELR------------LQSMAVTEPTT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLL 262
           GTD   + +   K  DG Y ++G K ++S    SD  I+LA+       +     +   L
Sbjct: 131 GTDTTKLKTTAVKK-DGRYVVNGQKVWISRVQHSDMMILLARTTPLSDVKKKSDGLSCFL 189

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            D      NGL  + + N + N    T EL F N       L+G+       + D     
Sbjct: 190 VDLHQAIGNGLTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGKGFKYILDGLNAE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      +  A  YA  R V    +     ++  IA+  +D+ AA  + ++ 
Sbjct: 247 RALIAAECIGDGYWFVDRASKYASERIVFDRPIGMNQGIQFPIAESYIDVRAADLMRYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD  +    EA  A+ +A    +             ++  GG G+  E  + R +RE
Sbjct: 307 CELFDNHQPCGAEANMAKHLAATASW-------KAANACLQTHGGFGFACEYDVERKFRE 359

Query: 437 SPANSI 442
           +    +
Sbjct: 360 TRLYQV 365


>gi|54024059|ref|YP_118301.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54015567|dbj|BAD56937.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
          Length = 418

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 41/317 (12%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W   I +                     +TE   G+D    + + 
Sbjct: 123 AATIMSRGTLAQQERWLRDIVTM-------------DKVAAWAITEPDSGSDAFGGMKTY 169

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQ 273
            ++  +  Y L+GHK F+++   +D  ++ A+++          V   + D    GL   
Sbjct: 170 VRRDGED-YLLTGHKTFITNGPYADIIVVYAKLDEPGVDRRDRKVLTFVLDKGMEGLTQS 228

Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-------MSVS 326
           +   K+G  ++ T EL F N         +   G  ED +     DSA        + V+
Sbjct: 229 KPFKKMGLHASPTGELFFDNVR----LGRDRLLGETEDHRGGDGRDSARANFTTERIGVA 284

Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
            M + +        I YA+ R + G  +    +++  +A + +       + F       
Sbjct: 285 FMALGIIAECHRLCIDYAKNRRLWGQEIGRFQLVQLKLATMEIARINVQNMVFSTLERAR 344

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K  +   A A  +      +  + A  V  EA++  GG+GY+ E  + +  R++ +  
Sbjct: 345 AGKLPTLAEASAMKL------YAAQAATEVAMEAVQLFGGNGYMSEYRVEQLARDAKSLM 398

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  GS    V  +   L
Sbjct: 399 IYAGSNEIQVTHIAKGL 415


>gi|293607477|ref|ZP_06689814.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
 gi|292814122|gb|EFF73266.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 134/381 (35%), Gaps = 43/381 (11%)

Query: 89  PGGER------WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
              ER       ++         + R+    GL           V       + A     
Sbjct: 18  RFAERELRDGAVERAHSDDYPWDIARKMAGQGLLGITVAEQDGGVGGSLMDAVIAIETVA 77

Query: 143 MAQL-EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                 A  + + +  +  ++A   +    + +   + + E               I +G
Sbjct: 78  SVCPRSADVVQAGNFGAIRVLAEYGSALQKQKYLTALLAGE-------------GLISVG 124

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           +TE   G+ +  + +   + SDG + ++G K F +     + ++L  V    G   +  +
Sbjct: 125 MTEPDAGSAVTELKTSATR-SDGGWRINGTKIFTTHGPHAS-VILTYVRFGPGTGGIGSV 182

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-----VELEFSNTFGFLLGDLNVSTGPVED--MKI 314
           L D   +G+       K+G RS        VE+ F N F      +    G  +      
Sbjct: 183 LIDTKADGV-------KLGKRSAFMSGEEWVEIFFDNVFVADDMVVLGEGGFKKQIAGFN 235

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
           +  + +   S++  R +  EA ++A +R   G +L +   ++   AD+ + + AA  L +
Sbjct: 236 VERIGNTARSLALGRYAYEEARNWAMQRKQFGRLLCEFQGLQWKFADMRIKLDAAQLLLY 295

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           R A   D     + +         I K +C ++   V  +A++ +GG GY  E  +    
Sbjct: 296 RAAIGADTGFPSATD-------TAIAKAYCNQVGFDVANDALQVLGGLGYSRESLVEYCV 348

Query: 435 RESPANSILLGSGNAMVLDVL 455
           R      I  GS   +   + 
Sbjct: 349 RRCRGWMIAGGSIEILKNRIA 369


>gi|269125103|ref|YP_003298473.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268310061|gb|ACY96435.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 650

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 129/407 (31%), Gaps = 47/407 (11%)

Query: 74  ARMANYNTPQLHAYGPG-GERWDKVEFHPAWH---ALLRRSIHDGLHCSIWDRSFEPVVR 129
           A+        L        E+ D V           ++      G         +  +  
Sbjct: 64  AQDTERGEAFLAKLREFCAEQVDPVRIEREARIPDEVVAGLREIGALGMKIPEKYGGLGL 123

Query: 130 KQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
            Q +  RA  L   +   L A      S+     V L  T    + W P+  +       
Sbjct: 124 SQFYYGRALMLVGSVSPALGALLSAHQSIGVPQPVMLFGTDEQKETWLPRCVN------- 176

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIM 245
                         LTE   G+D A + +      DG  Y L+G K + ++ + +D  ++
Sbjct: 177 --------EISAFLLTEPDVGSDPARLRATAVPTPDGEEYVLNGVKLWTTNGVVADLLVV 228

Query: 246 LAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
           +A+V    G    +   + +    G+  +     +G R        F +        +  
Sbjct: 229 MARVPESPGHRGGISAFVVEADSPGITVENRNAFMGLRGIENGVTRFHDVRVPARNLIGR 288

Query: 305 STGPVEDMKILIYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               ++    L  L++  +S+      G + +   A  + R R   G  + +   +   +
Sbjct: 289 EGAGLK--IALTTLNTGRLSLPALCAGGGKWAAKIAREWCRERVQWGRPIGEHEAIAGKL 346

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A I     A  A+    A   D+ ++         I A + K +  +M+  +  E ++  
Sbjct: 347 AFITATTYALEAMVDLAALLADDERNDIR------IEAALAKLYGSEMSWRIADELVQLR 400

Query: 420 GGSGY-IEER---------SIARHYRESPANSILLGSGNAMVLDVLN 456
           GG GY   E             +  R+   N I  GS   M L +  
Sbjct: 401 GGRGYETAESLAARGERGVPAEQLLRDLRINRIFEGSTEIMHLLIAR 447


>gi|300245625|gb|ADJ93870.1| putative benzoate-degrading protein BamM [Clostridia bacterium
           enrichment culture clone BF]
          Length = 170

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 16/179 (8%)

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARR 341
           EL F N     +   N+     +  KI ++ LD   + ++   + +A+     A++YA+ 
Sbjct: 2   ELVFDNCR---IPKENLLGNLGDGFKIAMVTLDYGRLGIAAQALGIAQGAYEAALNYAKE 58

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +     ++  +AD+A  I AA  L +R A      +  S+EAA A++      
Sbjct: 59  RQQFGQAIARFQAIEFKLADMATQIDAARLLLYRAAYLASTVEKVSKEAAMAKM------ 112

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            +C  +A +V  EA++ +GG GY  +  + R  R++    I  G+     + +   + K
Sbjct: 113 -YCSDVAMSVTVEAVQILGGYGYSRDYPVERMMRDAKITQIYEGTNEIQRVVIAADILK 170


>gi|269216711|ref|ZP_06160565.1| crotonobetainyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129856|gb|EEZ60939.1| crotonobetainyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 384

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 116/369 (31%), Gaps = 28/369 (7%)

Query: 98  EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY-LMAQLEAGHLMSPSV 156
           E H     +       G         +  +     H      +  L       H++  + 
Sbjct: 34  ETHTMPDEIAEAYRDAGFGLMGIPEEYGGI--PADHVTLGLMIEELYHSAGCNHILYQNS 91

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                +    TP   +                A M+       L ++E   G+D  ++T 
Sbjct: 92  LDMLDICSFGTPEQIQ------------KCVDAYMETGWPLCSLSISEPGAGSDNRSMTC 139

Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQR 274
             +K  DG Y L+G K +++        I++A+ E        +   L +    G+    
Sbjct: 140 TAKKQEDGTYVLNGQKTWVTMGAQLPYTIVVAKDEDPARENGSMSLWLINMDREGVSTAA 199

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVS 331
           L +KIG +     E+   N        +     G +  MK             +   + +
Sbjct: 200 L-HKIGQQCIPFCEVYLDNVVVTEEDRVGKPGEGFMLLMKNFEVERAFIVAEQLGLAQAA 258

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YA +R   G  +    +++  + ++ + +     + +++    D       ++A
Sbjct: 259 LDDAAAYANQRIAFGKPIAKFQMIQEKLTEMEIRVQNTRNMLYKVLWELDNGIPVQLDSA 318

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             +        + C     V   A+   GG GY  E  I R + +   N    G+   M 
Sbjct: 319 LLKR-------YGCTACFEVGDMALSIYGGLGYTSEVRIGRIWSDLRGNMFGGGTPEIMA 371

Query: 452 LDVLNLLEK 460
                 + K
Sbjct: 372 YISGRQVAK 380


>gi|240168609|ref|ZP_04747268.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478]
          Length = 402

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 111/291 (38%), Gaps = 33/291 (11%)

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-I 244
           TN+   +   V   + +TE   G+D AA+++      D  Y ++G K F+++       +
Sbjct: 118 TNEQLERLGKVWAAMAITEPGFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIV 176

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GF 297
           + A ++   G   +   +      G+  +RL++K+G +++ T  + F N         G 
Sbjct: 177 VWATLDKSKGRAAIKSFIVPREHPGVTVERLEHKLGIKASDTAVIRFDNARIPKDNLLGN 236

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA----------IHYARRRHVSGG 347
                      V +         A M++   R +L E           I Y R  +V   
Sbjct: 237 PEIQEGKGFSGVMETFDNTRPIVAAMAIGVGRAALEEIRKILTNAGVEIDYDRPAYVQSA 296

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
              +          +  +  A+  L+ R A   D     S+EA+ ++  A        +M
Sbjct: 297 AAAEF-------LRMEAEWEASYLLALRAAWQADNNIPNSKEASMSKAKAG-------RM 342

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V  +++E  G +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 343 ASDVTLKSVELAGTTGYSEQTLLEKWARDSKILDIFEGTQQIQQLVVARRL 393


>gi|67541182|ref|XP_664365.1| hypothetical protein AN6761.2 [Aspergillus nidulans FGSC A4]
 gi|40739389|gb|EAA58579.1| hypothetical protein AN6761.2 [Aspergillus nidulans FGSC A4]
          Length = 403

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 127/365 (34%), Gaps = 30/365 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D++E  P            G                 +      +    +       
Sbjct: 30  QECDQLERDP--KEFHAALAKAGWLGIALPEEHGGAGLGISEATIMMQTITQSGAGMAGA 87

Query: 152 --MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +V +   +A     +   +  P I + ++                 G+TE   G 
Sbjct: 88  QSIHANVYATQPLAKFGNEQQLTETIPNIINGKWR-------------TCFGVTEPNTGL 134

Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLE 263
           +  A+ ++ +  S G  Y ++G K +++ + ++   I+LA+ + R         +     
Sbjct: 135 ETLALQTRAELNSTGTHYSITGQKIWITCAQVARKMILLARTKPREEVSKPTQGLSMFCI 194

Query: 264 D--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D   +  GL  +++K K+G R+    E+ F         L+G  N     +         
Sbjct: 195 DIDKNEPGLELKKIK-KMGGRAVDANEVFFDKYQVPASTLIGRENEGFRMILHGMNAERC 253

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    V+L  A  YA  RHV G  +     +   +AD+ + + AA   ++  A 
Sbjct: 254 LLAGEALGLGYVALERAAEYANTRHVFGRAIGKNQAIAHPLADVYMKLEAAKLATYHAAR 313

Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D +++  S  A    + A   KY   + A      A+   GG GY  E  + R  RE 
Sbjct: 314 LYDASRTDESIPAHSVGVAANSAKYLAAEAAFTACERAVLTHGGMGYAMEYDVERWLREC 373

Query: 438 PANSI 442
               I
Sbjct: 374 LVPRI 378


>gi|298248514|ref|ZP_06972319.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551173|gb|EFH85039.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 385

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+   +P   A ++     G    +  + +  +    A           +   AG +
Sbjct: 27  RDLDQRRVYPE--AFIQAMTEAGFLAPLIPQEYGGLGLGLAETSVILEEVNRSGGNAGTV 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               V +   +    +    + + P+I               T      G+TE   GTD 
Sbjct: 85  -HAQVYTMGTLLRHGSEEQKRRYLPEIARG------------TLRLQAFGVTEPEAGTDT 131

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
             I++   +  D  Y +SG K ++S    SD  I+LA+   R         +   L D  
Sbjct: 132 TQISTIAVRDGDH-YVISGQKIYISRVQHSDLMILLARTTPREQVRKKTEGLSVFLMDLK 190

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
                GL    ++  +   +N T +LEF+     +   +G+       + D      +  
Sbjct: 191 EALEGGLTVTPIRTML---NNETNKLEFNQVRVPVANRIGEEGRGFRYILDGMNAERILI 247

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   V   R  + +A   A+ R V G  +     ++  +A     + AA  + +R A  F
Sbjct: 248 ASECVGDGRWFIEQATARAKERIVFGRPIGQNQGIQFPLAQAYAHVEAADLMRWRAATLF 307

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+ K    EA  A+++A    +            A++  GG G   +  I R +RE+   
Sbjct: 308 DQGKPCGAEANMAKLLAADASW-------EAANAALQTFGGYGLTSDYDIERKFRETRLY 360

Query: 441 SI 442
            +
Sbjct: 361 QV 362


>gi|261202958|ref|XP_002628693.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239590790|gb|EEQ73371.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 417

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 21/339 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
               L    W     P     +    +    +M  +          +S  M      P V
Sbjct: 70  FQAALAKDGWLGVCMPTEFGGSQLGISEAAVMMQTISESGAGMSGASSVHMNIFGLEPVV 129

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  + E       P+ +        +TE   G D   + S   +  D       
Sbjct: 130 ------RFGNAEQKQRFLIPLIQGRERACFAVTEPNTGLDTLKLRSMATRDGDHYILRGS 183

Query: 231 HKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             W  ++  ++  ++L +             +     D   + +    +  K+G  +  T
Sbjct: 184 KIWISTAQHAEKILILVRTTQLDKVTKPSQGLSLFYTDLDRSQVDVSEIP-KMGRAAVDT 242

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L F N       ++G+ N     +        +  A  ++     +L  A  YA  R 
Sbjct: 243 NTLFFENWKVPAADMIGEENNGFKMIMHGMNAERILIAAEALGLGYAALRRAAIYANERQ 302

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  +     ++  +AD  +++ AA  + ++ A  +D   +  E A  A+ +A    + 
Sbjct: 303 VFGRSIGQNQGIQHPLADSWMNLEAARLMVYQAARMYDAGYTSGEYANAAKYLAAEAAFR 362

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            C+ A       +   GG GY  E  + R+ RE+    I
Sbjct: 363 ACERA-------VMSHGGMGYAREYHVERYLREAFIPRI 394


>gi|239612509|gb|EEQ89496.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 417

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 21/339 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
               L    W     P     +    +    +M  +          +S  M      P V
Sbjct: 70  FQAALAKDGWLGVCMPTEFGGSQLGISEAAVMMQTISESGAGMSGASSVHMNIFGLEPVV 129

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  + E       P+ +        +TE   G D   + S   +  D       
Sbjct: 130 ------RFGNAEQKQRFLIPLIQGRERACFAVTEPNTGLDTLKLRSMATRDGDHYILRGS 183

Query: 231 HKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
             W  ++  ++  ++L +             +     D   + +    +  K+G  +  T
Sbjct: 184 KIWISTAQHAEKILILVRTTQLDKVTKPSQGLSLFYTDLDRSQVDVSEIP-KMGRAAVDT 242

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
             L F N       ++G+ N     +        +  A  ++     +L  A  YA  R 
Sbjct: 243 NTLFFENWKVPAADMIGEENNGFKMMMHGMNAERILIAAEALGLGYAALRRAAIYANERQ 302

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  +     ++  +AD  +++ AA  + ++ A  +D   +  E A  A+ +A    + 
Sbjct: 303 VFGRSIGQNQGIQHPLADSWMNLEAARLMVYQAARMYDAGYTSGEYANAAKYLAAEAAFR 362

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            C+ A       +   GG GY  E  + R+ RE+    I
Sbjct: 363 ACERA-------VMSHGGMGYAREYHVERYLREAFIPRI 394


>gi|84501972|ref|ZP_01000130.1| putative acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
 gi|84389967|gb|EAQ02601.1| putative acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597]
          Length = 384

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 114/346 (32%), Gaps = 26/346 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
           H L R     G       +            I  A + + A  E+G   S +      + 
Sbjct: 35  HDLHRAMADGGWLGIAMSQEVGGAGL----GITEATIMMQAIAESGAGASGASAIHMNI- 89

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P V      K  + E       P+          +TE   G D   + +   +  D
Sbjct: 90  FGLNPVV------KFGTDEQRARMLTPLIAGDEKACFAVTEPTTGLDTTKLKTMAVQQGD 143

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
                    W  ++ ++D  ++LA+     +       +     D + + +  + ++ K+
Sbjct: 144 RYVVHGQKVWISTAQVADKMLLLARTTRLEDVSSPTDGLSLFYTDLNRDFVDVREIE-KM 202

Query: 280 GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
           G ++  + E+           L+G+       +        +  A   +   R +LA A+
Sbjct: 203 GRKAVDSNEVFIDGLPIPAEDLIGEEGKGFRQILHGLNPERILVAGECIGIARNALARAV 262

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YAR R V    +     ++  +A     + AA  +    A  +D  +    EA  A+++
Sbjct: 263 QYARERVVFDRPIGQNQGVQHPLAKAWAQVEAANLMVMHAAALYDAGEPCGVEANAAKLL 322

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A        ++A           GG GY +E  + R  RE+    I
Sbjct: 323 AADAAVEATEVA-------QMTFGGFGYAKEYHVERLVREALLFRI 361


>gi|331700007|ref|YP_004336246.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326954696|gb|AEA28393.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 416

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 135/432 (31%), Gaps = 41/432 (9%)

Query: 39  SDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE 98
           SD +L    + F + +  E+  L         QEL   A+  TP            DK  
Sbjct: 15  SDRVL-DYTSRFRTFLDAEVAPL--------EQEL-HSADAGTPWNPRLD------DKGR 58

Query: 99  FHP----AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
            HP    A   + RRS   GL        + P +  +       R+ +    E  +  S 
Sbjct: 59  MHPLVWEARREVQRRSAKAGL--------YNPHIPAELGGGGFGRVEMQHVEEYVYHASG 110

Query: 155 SVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
                + +A      P +         S         P+    V      TE+  GTD+ 
Sbjct: 111 LGLGLAALAWTEGANPALTH------VSDVARGRYLDPLMAGEVTTAFANTEREVGTDVL 164

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+ ++ ++            W  ++  +D   ++A  E   G   +   L D    G   
Sbjct: 165 AMGTRARRDGSDWILDGTKAWITNAHFADFVQVVAVTEAGAGTRSLSMFLVDADAPGFHR 224

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            R    + N    T EL           ++G++               +    M      
Sbjct: 225 GRDIPTMLNDGL-TGELHLDGVRVPAENVVGEVGDGFALAMTWINWRRMCRGGMCAGWGT 283

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
             L  A   AR R   G  + +   ++  +AD+  D+ AA + S       DE       
Sbjct: 284 WLLERATERARTRESGGRPIGELQAVQHLLADMDADVFAARSASLVGQVELDELGPFDIP 343

Query: 390 AAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           A      +  + K    +    V   A++  GG+G +   +  + +R +    I  G+  
Sbjct: 344 AHRDVPRLVSLIKVVNDEAFFRVADRAVQVHGGTGLLLGSAEEKLFRVARNLRIPAGTVE 403

Query: 449 AMVLDVLNLLEK 460
                +   L +
Sbjct: 404 IQRNAIARGLLR 415


>gi|86750711|ref|YP_487207.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
 gi|86573739|gb|ABD08296.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2]
          Length = 424

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 128/440 (29%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    LVA +A     +  +++ L        A +  R  ++          GG     
Sbjct: 3   FSLPPDLVAYLAELDRFIDAKIKPL------EQADDNIRFFDHRREWARTDFEGGGLPRH 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQL 146
            W+++            +   G       + +                  A  L L   L
Sbjct: 57  DWEELL-----RKAKNIADDAGHLRFAIPKRYGGQDGTNLWMAVIREHFAAKGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +     M+ L             +                   I  GLTE  
Sbjct: 112 QNEHSIVGNFPIVKMLDLYGRDDQKA-----MIDG---------SITGKYRITFGLTEPD 157

Query: 207 GGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++     +     + ++G K + +         + A+  G+ G    +   
Sbjct: 158 HGSDATHMETRAVEAVRDGKKGWVINGEKMWTTGMHVATHCALFARTTGQDGDARGITCF 217

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F++ F     L G++       +       +
Sbjct: 218 LVPADAPGVKVEEYLWTF-NMPTDHPRVSFTDVFVTEDALFGEVGRGLSLAQCFVHENRI 276

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E++ YAR R   G  L     ++  + ++A        L  + A 
Sbjct: 277 RQAASSLGAAVFCINESVKYARERKPFGEELARNQAIQFPLVELATQAEMLRLLIRKTAW 336

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 337 EMDQMTQAQVEHTLSDK-VSMCNYWANRLCGQAADRAIQVHGGIGYSRHKPFEHIYRHHR 395

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 396 RYRITEGSEEIQMRKVAGFL 415


>gi|85710149|ref|ZP_01041214.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
 gi|85688859|gb|EAQ28863.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1]
          Length = 428

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 129/440 (29%), Gaps = 44/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++  + L A +    + +  E++ L        A +  R  ++           G     
Sbjct: 3   FAIPADLQAYLGELDAFIEAEIKPL------EQADDNIRFFDHRREWARTNFEEG----- 51

Query: 97  VEFHPAWHALLRRSIHDGLHCSIW----DRSFEPVVRKQAHKI----RAARLYL--MAQL 146
                 W ALLR +         W     + +                 AR+ L     L
Sbjct: 52  GLPREDWEALLREATARADKAGHWRFSAPKKYGGKDGSNLWMAVIREHFARMGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +    +M     T    +++    F+RE               +  GLTE  
Sbjct: 112 QNEHSIVGNFPFVAMFDQWGTEEQKQEFITGGFNRERR-------------VAFGLTEPD 158

Query: 207 GGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRL 261
            G+D   + +   + +    DG        W     ++    M A+  G  G    +  L
Sbjct: 159 HGSDATHMETTAVREARDGVDGWLINGEKMWITGMHVATHCAMFARTSGEAGDASGITCL 218

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L      GL  +       N       L   + +     +LG         +       +
Sbjct: 219 LVPNPTEGLEIEEWMWTF-NMPTDHPRLSVKDVWVPDSAILGVEGRGLALAQSFVHQNRI 277

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S       + E++ YAR R   G  L     ++  + ++A        L F+ A 
Sbjct: 278 RQAASSCGAALFCIDESVKYARERKPFGEALSKNQAIQFPLVELATQAEMLRLLIFKTAW 337

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D       E   +     +  YW  ++       AM+  GG GY   +     YR   
Sbjct: 338 EMDNMPHEEIERTISDK-VSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHR 396

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 397 RYRITEGSEEIQMRKVAAYL 416


>gi|120403333|ref|YP_953162.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119956151|gb|ABM13156.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 418

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 111/319 (34%), Gaps = 38/319 (11%)

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-AAITSQ 217
           A+ +    T    + W P++ + E                   +TE   G+D    + + 
Sbjct: 122 AATIMSRGTLAQKERWLPELMTLE-------------KIAAWAITEPDAGSDAFGGMKTY 168

Query: 218 GQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ------VEGRVGCFLVPRLLEDGSPNGL 270
            ++     Y L+G K F+++   +D  ++ A+       + R     V   + D    GL
Sbjct: 169 VKRDGAD-YILNGQKTFITNGPDADVLVVYAKLADDPATDPRQRP--VLTFVLDSGMAGL 225

Query: 271 CYQRLKNKIGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAI 322
              R   K+G  S+ T EL F N                                L  A+
Sbjct: 226 TQGRPFKKMGMMSSPTGELFFDNVRLSPDRLLGETEQHGAGDGRDSARANFAAERLGIAL 285

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           MS+  +       + YA+ R + G  +    +++  +A I +       + F+       
Sbjct: 286 MSLGIINECHRLCLDYAKTRTLWGRNIGQFQLIQLKLARIEVARMNVQNMVFQTLERLGA 345

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +  S   A A  +      +  + A     EA++  GG+GY+ E  + +  R++ +  I
Sbjct: 346 GRMPSLAEASAIKL------YSSEAATEAAMEAVQLFGGNGYMAEYRVEQLARDAKSLMI 399

Query: 443 LLGSGNAMVLDVLNLLEKG 461
             GS    V  +   L  G
Sbjct: 400 YAGSNEIQVTHIAKGLLSG 418


>gi|94313383|ref|YP_586592.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
 gi|93357235|gb|ABF11323.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans
           CH34]
          Length = 390

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 116/364 (31%), Gaps = 35/364 (9%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLE 147
             E   + +F  A+H  +      G         F        +A  I        A   
Sbjct: 28  WAELDREHKFPEAFHRAM---ADAGWLGIAMPERFGGAGLGITEAALIMQTVSASGAGFS 84

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +V   + V +  T        P             P+          +TE   
Sbjct: 85  GASSIHMNVFGLNPVVVFGTEAQQAAALP-------------PLIAGRDKACFAVTEPDA 131

Query: 208 GTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
           G D   + +Q  + +DG          W  ++ ++   ++LA+             +   
Sbjct: 132 GLDTTHLKTQAVRTADGSAYRVDGRKIWISTAQVASRMLLLARTTPLDAVAKPTQGLSLF 191

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYL 318
                 N +  + + +K+G  +  +  L            +G+       +        +
Sbjct: 192 YTTLDRNHIEVREI-DKMGRGAVDSNMLFIDGLMVPAEDRIGEEGRGFEYILHGLNPERI 250

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  SV   R +L  A  YAR R V G  +     ++  +A   + + AA  + ++ A 
Sbjct: 251 LIAAESVGLGRAALEAATRYARERTVFGRPIGQNQGIQHPLAQAWMALEAADMMVWKAAW 310

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  K    EA  A+ +A    +  C+ A       +  +GG GY  E  + R+ RES 
Sbjct: 311 LYDNGKPCGAEANAAKYLAAEAAHQACQTA-------VLTLGGMGYAREYHVERYLRESY 363

Query: 439 ANSI 442
              I
Sbjct: 364 IPRI 367


>gi|318058840|ref|ZP_07977563.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318080468|ref|ZP_07987800.1| glutaryl-CoA dehydrogenase [Streptomyces sp. SA3_actF]
          Length = 399

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 113/355 (31%), Gaps = 26/355 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  R    G+     D +  P        +    +  +    A      +  +   V   
Sbjct: 60  LRGRIAELGITGEEGDDAGVPARSSLFRGLLGMEMARVDPSFATFFGVHAELAMGSVRAC 119

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDG 224
            +      W P +   E                   LTE   G+  AA +T+  ++  D 
Sbjct: 120 GSEEQKARWLPAMTRWE-------------KLGAFALTEPLVGSGTAAGLTTTARREGDT 166

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW  +   +D  ++ A+             + +    GL    + +KI  R  
Sbjct: 167 WVLDGEKKWIGNGSFADLLVVWARDVADDQVKG---FVVEHGAAGLSADVIPHKIALRGV 223

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
               L            L  +    +  ++L       A  +      +   A  YA  R
Sbjct: 224 QNAHLALDGVRVPEADRLQHAESFADTNRVLRVTRAAVAWTATGCALGAYEAARAYAVER 283

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    +++  +A +  DI A  +L+ RLA   ++ +    +AA        TK 
Sbjct: 284 EQFGRPIGSFQLVQDNLARMLADITACQSLAVRLAALEEKGELSDAQAAL-------TKM 336

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +C       +A A E +GG+G + +   AR + ++ A     G+ +   L V   
Sbjct: 337 FCTTRMRETVARAREVLGGNGILLDHDAARFFADAEALYSYEGTRDMNSLIVGRA 391


>gi|254390569|ref|ZP_05005784.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294815651|ref|ZP_06774294.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444000|ref|ZP_08218734.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|197704271|gb|EDY50083.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064]
 gi|294328250|gb|EFG09893.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC
           27064]
          Length = 390

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 99/303 (32%), Gaps = 13/303 (4%)

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMS 240
           E        +   +      L+E   G+D AA+  + +     G     G +W  ++P +
Sbjct: 97  EQRERWLPGVTDGTAVAAFALSEPDAGSDAAALALRAEPDPSGGWRLYGGKRWISNAPEA 156

Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---F 297
           D + + A+     G   V   L  G   GL      + +   +     L F  T      
Sbjct: 157 DFYTVFARTTEGAGARGVTAFLVPGDRPGLT-GVPLDMLAPHAI--GALTFDGTPVGGAD 213

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           +LG ++           L        +V   + +L   + +  RR   GG L +   +  
Sbjct: 214 VLGAVDGGFAVAMRTLDLFRPSVGAFAVGMAQTALDATLEHTARRRAFGGPLAELQAVAH 273

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A++A    AA  L +        A +    AA     + + K +  + A  V+  A++
Sbjct: 274 RVAEMATRTEAARLLVYA------AAAAYDAGAAEVPRRSAMAKLYATEAAQYVVDSAVQ 327

Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477
             G         + R YRE  A  I  G+       +   L +                G
Sbjct: 328 LHGACALQRGHPLERLYREVRAPRIYEGASEVQRSIIARALYRERPSGAGARGETADPQG 387

Query: 478 SSG 480
            +G
Sbjct: 388 RAG 390


>gi|332373548|gb|AEE61915.1| unknown [Dendroctonus ponderosae]
          Length = 188

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 10/191 (5%)

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKIL--IYLDSAIMSVSGMR 329
            RL++K+G R+++T +    N        +     G +  MK L    +  A  ++   +
Sbjct: 2   GRLEDKMGIRASSTCDFHLENVCVPKDNLIGKTGDGFLIAMKQLEKARVGIASQALGIGQ 61

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L  A+ Y+  R   G  L     +K  +A++A  + AA  L +R A   DE +     
Sbjct: 62  AALELAVQYSSERKAFGHPLNQLQAVKLRLAEMATKLEAARLLVWRAAAILDEGE----- 116

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A     + K    + A  V   A++ +GG GYI++    R+YR++    I  G  + 
Sbjct: 117 --RATKYTSMAKLAASEAATFVSHGAIQILGGMGYIKDMPAERYYRDARITEIYAGVNDV 174

Query: 450 MVLDVLNLLEK 460
             L + +++ K
Sbjct: 175 QKLLIADMVIK 185


>gi|322692915|gb|EFY84798.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102]
          Length = 423

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 16/276 (5%)

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P   + +       P+          +TE   G D   I ++  +  +         W 
Sbjct: 133 LPNFGTEQQKKKFLEPLMAGRERACFAVTEPDTGLDTLKIQAKAVRNGNHYALSGQKIWI 192

Query: 235 LSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVEL 289
            ++  +   ++LA+       +     +     D + N  +    ++ K+G+ +  +  +
Sbjct: 193 TTAQTAQKILILARTTPISRVKKSSEGLSLFYTDLNDNLPIQIAEIE-KMGHGAIDSNAV 251

Query: 290 EFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F          +GD       +        +     ++     +L  A  Y+  R V G
Sbjct: 252 FFDGWKVPARDRIGDEGYDFKLIMHGMNAERILIGCEALGLGYAALRRAAIYSNERVVFG 311

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +AD  +++ AA  +  + A  +D+     E A   + +A    +  C+
Sbjct: 312 RPIGQNQAIQHPLADSWMNLEAARLMLAQAARMYDDGYESGEYANAGKYLAAEAAFKACE 371

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A       +   GG GY +E  + R+ RE     I
Sbjct: 372 RA-------VMGHGGMGYAKEYHVERYLREVLIPRI 400


>gi|192290356|ref|YP_001990961.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192284105|gb|ACF00486.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 424

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 128/440 (29%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    LVA +A     +  +++ L        A +  R  ++           G     
Sbjct: 3   FSLPPDLVAYLAELDRFIDAKIKPL------EQADDNIRFFDHRREWARTDFEHGGLPRH 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQL 146
            W+ +            +   G       + +                  A  L L   L
Sbjct: 57  EWEDLL-----RKAKNLADDAGHLRFAIPKRYGGQDGTNLWMAVIREHFAAKGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +     M+ L  +P         +                   I  GLTE  
Sbjct: 112 QNEHSIVGNFPIVKMLDLYGSPEQKA-----MIDG---------SITGKYRITFGLTEPD 157

Query: 207 GGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++ +   +     + ++G K + +         + A+  G+ G    +   
Sbjct: 158 HGSDATHMETRAEEAVRDGKKGWVINGEKMWTTGMHVATHCALFARTAGKDGDARGITCF 217

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F + F     + G++       +       +
Sbjct: 218 LVPADAPGVKVEEYLWTF-NMPTDHPRVSFKDVFVAEDAVFGEVGRGLSLAQCFVHENRI 276

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E++ YAR R   G  L     ++  + ++A        L  + A 
Sbjct: 277 RQAASSLGAAVFCINESVKYARERKPFGDELARNQAIQFPLVELATQAEMLRLLIRKTAW 336

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 337 EMDQMTQAQVEHTLSDK-VSMCNYWANRLCGQAADRAIQVHGGIGYSRHKQFEHIYRHHR 395

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 396 RYRITEGSEEIQMRKVAGFL 415


>gi|115436914|ref|XP_001217677.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188492|gb|EAU30192.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 439

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 35/367 (9%)

Query: 105 ALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            L R  I+D  G+    WD     +   +  +   +         A  +          +
Sbjct: 83  WLKRLGINDILGVKVEEWDYLHTGIYMDEMARSGLS--------SAAGINPGFCYGLPPI 134

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +P++ + + P + +                   + +TE   G+D+A I++   K  
Sbjct: 135 IKFGSPQLQERYLPDLLTG-------------KKRACIAITEPGAGSDVANISTTAVKSP 181

Query: 223 DGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIG 280
           DG  Y ++G K ++++ +   +  +A   G  G   +  LL       G+  +RL    G
Sbjct: 182 DGKHYIINGEKKWITNGIWSDYATMAVRTGGPGAAGLSVLLVPLKGYPGVNMRRL-TVAG 240

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            ++  T  +E  +       L+G        +        L  A+      RV+L+ A  
Sbjct: 241 QKTGGTTYIELDDVKVPVENLIGREGEGMRLIMTNFNHERLTIAVGVTRQARVALSSAFA 300

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIM 396
           Y  +R   G  L+DQPV++  +A    ++    A   +L   +       EEA      +
Sbjct: 301 YCLKREAFGKSLMDQPVVRHRLAKAGAELETMWAFMEQL--LYQMCHLSKEEADRQLGGV 358

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNAMVLD 453
             + K     +       A+   GG+G+    +   +   YRE P   I  GS + ++  
Sbjct: 359 TAMAKAKAAMVLNECAQCAVLLFGGAGFTQSGQGELVEAIYREVPGARIPGGSEDVLLDL 418

Query: 454 VLNLLEK 460
            +  L K
Sbjct: 419 SVRQLVK 425


>gi|329917837|ref|ZP_08276505.1| acyl-CoA dehydrogenase domain protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544490|gb|EGF30026.1| acyl-CoA dehydrogenase domain protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 319

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 118/328 (35%), Gaps = 32/328 (9%)

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
           A  Y      A ++ +P   +  ++  + +P   + W               P+ +  + 
Sbjct: 4   AAGYSPLGPVALNIHAPDEGNIHLMEHVASPAQKERWL-------------RPLVEGRIR 50

Query: 198 IGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG 254
               +TE     G+D + + +   +  D  Y +SG KWF++     +F I++A++E    
Sbjct: 51  SCFAMTEPAPGAGSDPSMMQTIAIQDGDD-YLISGTKWFITGAEGASFAIIMARMEDGSA 109

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGPVE 310
                  L D    G+  +RL   +    +     L F N       +LG++       +
Sbjct: 110 ----TMFLSDMDRPGIVLERLMESLDSCFAGGHGVLRFENVRVPATDVLGEIGKGFRYAQ 165

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370
                  L   +  +   + +   A+ YA  R   G  L +   +   +AD A+D+  A 
Sbjct: 166 IRLAPARLTHCMRWLGQAQRAHDVALDYASERQAFGKSLGEHEGVGFMLADNAMDLHTAR 225

Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430
                 A   DE    + E++        TK  C +    V+   ++ +GG G   E  +
Sbjct: 226 LNILHTAWVLDEGGRGNIESSM-------TKVICSEAIWRVVDRCVQILGGRGVTAETIV 278

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458
            R +++     I  G        + N L
Sbjct: 279 MRIFKDVRGFRIYDGPSEVHRWSIANKL 306


>gi|296162997|ref|ZP_06845773.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295886741|gb|EFG66583.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 115/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G   ++  + F                   A       
Sbjct: 29  RKIDEARGYPE--AFVDALTRAGWLAALIPQDFGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + PKI   E                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSDEQKRKYLPKIACGELR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +  ++  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TKIKTTAERRGDRYVINGQKVWISRVQHSDLMILLARTTPLADVKKKSEGMSIFIVDLHE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
               G+  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGQGMTVQPILN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFRYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   YA+ R V G  +     ++  IA   +++ AA+ + F  A  FD
Sbjct: 251 AECIGDGYWFVDKVTEYAKERVVFGRPIGKNQGVQFPIARSFINVEAASLMRFEAARRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 AHEPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|301062225|ref|ZP_07202902.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
 gi|300443657|gb|EFK07745.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta
           proteobacterium NaphS2]
          Length = 300

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 9/228 (3%)

Query: 237 SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
              +D F++ A+ +        +   + D S  G+  + L   +G R      L F++  
Sbjct: 48  GEGADYFLVYARTDPDREPHKSISCFIVDRS-EGVKTEYLYGLMGCRGGGASRLVFNDVK 106

Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                LLG+LN        M I   L +A M++     ++  A  Y  +R   G  +   
Sbjct: 107 VPRENLLGELNQGAKIFNTMMIPERLGTAAMTIGAAIPAVDVATGYTTKRKAFGRPVAAF 166

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
             +   +A+    + A+ ++ +  A + DE      +    R +   +K +  +     +
Sbjct: 167 QGVSFQVAEAVTLLDASRSMIYTTARAVDE----QIDEKRIRRLVSQSKKFVTESCQKAV 222

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             AM+ +GG GY     + R  R+    SI  G+   M + + N   K
Sbjct: 223 HNAMQVMGGIGYTNIYPVERILRDLRLASIWTGTNEVMSVIIANEWYK 270


>gi|126434172|ref|YP_001069863.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126233972|gb|ABN97372.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 471

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 124/349 (35%), Gaps = 34/349 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           L+ ++   G+        FE +   ++    A     +A  + G  +          AL 
Sbjct: 144 LIAKAAELGITAVNIPEDFEGIAEHRSTITNALVAEALAYGDMGLALPILAPGGVAAALT 203

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + P  F+ E  P              L + E R   D  A+ +   +   
Sbjct: 204 HWGSADQQATYLPA-FAGENVPQ-----------ACLAIAEPRPLFDPTALKATAVRTPG 251

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G           ++  ++ FI+ AQ++GR   F+V     + +  GL        +G R+
Sbjct: 252 GYRLTGTKSLVPAAADAEVFIIAAQLDGRPAMFIV-----ESASEGLTVTP-DPSMGVRA 305

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPV-------EDMKILIYLDSAIMSVSGMRVSLAEAI 336
            A   +E  N    L   L     P         +   L  L  A ++V      L   +
Sbjct: 306 AALGRVELDNVAVPLGNRLGEVEAPAPEIERNYREAIALSRLGWAALAVGTSHAVLDYVV 365

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            Y + RH  G  +  +  +    A+IA+++     +++R A+  ++    + EAA A+ +
Sbjct: 366 PYVKERHAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGASRAEQGLPYAREAALAKRL 425

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                         +  + ++ +GG GY +E  + R YR+     +  G
Sbjct: 426 -------GTDKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRVIGVAEG 467


>gi|76818257|ref|YP_337190.1| polyketide synthase [Burkholderia pseudomallei 1710b]
 gi|76582730|gb|ABA52204.1| polyketide synthase [Burkholderia pseudomallei 1710b]
          Length = 1276

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 663  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 722

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 723  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 769

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 770  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 826

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 827  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 886

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 887  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 940

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 941  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1000

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1001 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 1059


>gi|296418293|ref|XP_002838776.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634737|emb|CAZ82967.1| unnamed protein product [Tuber melanosporum]
          Length = 334

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 86/271 (31%), Gaps = 27/271 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV- 162
            +++ +    GL     + ++          + A             L+    T  ++  
Sbjct: 81  KSIVEQLFEQGLMGVEVEEAYGGSGMGFGAVVVAIEELARIDPSVSVLVDVHNTLVNIAF 140

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI- 221
               +  + K + PK+               T       L+E   G+D  A+ ++  K  
Sbjct: 141 RTYGSAVLKKKYLPKL--------------ATGTVGSFCLSEPASGSDAFALQTKAVKSE 186

Query: 222 -SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
                       W  ++  S+ FI+ A +    G   +   + +    G    + + K+G
Sbjct: 187 SGGSYKITGQKMWITNAAESEIFIVFANIAPERGYKGITAFVVEKGMPGFNIAKKEKKLG 246

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----E 334
            ++++T  L F +         N+     E  K  I  L+   + ++     LA      
Sbjct: 247 IKASSTCVLTFDDVEVPA---ENLLGKEGEGDKYAISLLNEGRIGIAAQMTGLALGAWEN 303

Query: 335 AIHYA-RRRHVSGGILIDQPVMKRAIADIAL 364
           A+ Y    R   G  + D   M+  IA    
Sbjct: 304 AVKYVWNERKQFGQYIGDFQGMQFQIAQGRT 334


>gi|67902856|ref|XP_681684.1| hypothetical protein AN8415.2 [Aspergillus nidulans FGSC A4]
 gi|40747881|gb|EAA67037.1| hypothetical protein AN8415.2 [Aspergillus nidulans FGSC A4]
 gi|259484351|tpe|CBF80495.1| TPA: Acyl-CoA dehydrogenase (Eurofung) [Aspergillus nidulans FGSC
           A4]
          Length = 438

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 119/312 (38%), Gaps = 17/312 (5%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL 235
           K  S+E        +        + +TE   G+D+A IT+   K +DG  Y ++G+K ++
Sbjct: 135 KYGSKELQEKFLPDLLTGKKRNCIAITEPDAGSDVAGITTTATKSADGKYYIVNGNKKWI 194

Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
           ++ +   +  +A   G  G   +  L+    +  G+  QRLK   G  +  T  +E    
Sbjct: 195 TNGIWSDYSTMAVRTGGPGAGGLSLLVVPLKNYPGVTMQRLKVS-GQITGGTTYIELDEV 253

Query: 295 FGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                 L+G        + +      L  A+      RV+L+ A  Y  +R   G  L+D
Sbjct: 254 KVPVENLIGLEGDGMKMIMNNFNHERLTIAVGVTRQARVALSTAFSYCLKREAFGKTLMD 313

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
           QPV++  +A    ++    A   +L         + E       +  + K     +    
Sbjct: 314 QPVVRHRLAKAGAELETMWAFVEQLLYQLTN-LPKEEADRQLGGITAMAKAKGAMVLNEC 372

Query: 412 IAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
              A+   GG+G+ ++          R+ P   I  GS + ++   +  L K       L
Sbjct: 373 AQTAVLLFGGAGFTKQGQGELAEAILRDVPGARIPGGSEDVLLDLSIRQLVK-------L 425

Query: 469 FSTLEQDLGSSG 480
           F   E+ LG + 
Sbjct: 426 FKAEEKKLGKAR 437


>gi|237509924|ref|ZP_04522639.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei
            MSHR346]
 gi|235002129|gb|EEP51553.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei
            MSHR346]
          Length = 1291

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 33/419 (7%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 678  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 737

Query: 172  KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
             +  P + +                     LTE   G++  AI S  Q+   G + +SG 
Sbjct: 738  DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRADGGHWVVSGR 784

Query: 232  KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 785  KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 841

Query: 291  FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                       LG         +       L    + V  M+        YA RR +  G
Sbjct: 842  LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 901

Query: 348  ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 902  LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 955

Query: 408  APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                  E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 956  LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 1015

Query: 468  LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                      L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 1016 YLGERSGALALAAELRGLGEQLLEDGLANADALGGGAHAANWVNYWLGSVAQWALLLAV 1074


>gi|110835394|ref|YP_694253.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110648505|emb|CAL17981.1| acyl-CoA dehydrogenase, putative [Alcanivorax borkumensis SK2]
          Length = 399

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 125/372 (33%), Gaps = 35/372 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
           AL  ++   GL      +    +    +           +               +M+ L
Sbjct: 47  ALRDKAKAAGLWGFQLPKERGGLGVNVSGMAVLYEEAARSPFGPVVFNCAPPDDGTMIML 106

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKIS 222
                       KI + E       PM    V     +TE     G+D +   +   K  
Sbjct: 107 N-----------KILNNEQKERWLQPMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDG 155

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  + + G KWF++    +  FI++A+         +   L D    G    R    +G 
Sbjct: 156 DN-WIIKGRKWFITGAEGAQTFILIAKTSDDP-RKGLTAFLFDADQPGWEVVRRIPIMGP 213

Query: 282 --RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS-----VSGMRVSLA 333
                   EL+F    G ++ D N      + +K+  I L +A ++     +   +  + 
Sbjct: 214 EEHGGH-CELKFD---GLVIPDKNRLLDVGDGLKVTQIRLGTARLTHCMRWLGLAKRCME 269

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           EA  Y   R   G  L +   ++  + D+A +I     L+ + A   D+     +E A A
Sbjct: 270 EAASYVENRMSFGTTLAEHEGVQWMLGDVAKEIEVGRLLTMQAAWMLDQGDFAKKEIAMA 329

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           +I    T +     A       ++  G  GY ++  +   YR +    ++ G+     + 
Sbjct: 330 KIHVADTLHKAADTA-------IQLCGARGYSKDTLLEWIYRYARQARLVDGASEVHKMV 382

Query: 454 VLNLLEKGTNLF 465
           +  L  K    F
Sbjct: 383 LSRLYLKEKRDF 394


>gi|289748322|ref|ZP_06507700.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92]
 gi|289688909|gb|EFD56338.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92]
          Length = 359

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 32/310 (10%)

Query: 245 MLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298
           +LA+ EG       V  FLV R   DGS NG+  +RLK+K+G RS A+ E+EF +   FL
Sbjct: 2   VLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFL 61

Query: 299 LGDL---------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           L                  + ++   + L +A  ++   R +L E++ YA +R   GG L
Sbjct: 62  LSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGAL 121

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
           ID+P+M+R +A++ +D+ AA A+ F    + +  + R      A    P+TK   C++  
Sbjct: 122 IDKPLMRRKLAEMVVDVEAALAMVFDGFGAANHRQPRCLPQRIA---VPVTKLKTCRLGI 178

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469
            V ++A+E  GG+GYIE   +AR  R++  N+I  G  N + LDV   +E+ T   E L 
Sbjct: 179 TVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLL 237

Query: 470 STLEQDLGSSGK--------KVITILRDSISL---CKEDKGLARF--LTEKIALASSAAA 516
           + L   +  S          + I  L  +I+           AR   L + +    + A 
Sbjct: 238 ARLRDAVSVSDDDDTTRLVSRRIEDLDAAITAWTKLDRQLAEARLFPLAQFMGDVYAGAL 297

Query: 517 LYRAGMNDIA 526
           L      + A
Sbjct: 298 LTEQAAWERA 307


>gi|119713186|gb|ABL97254.1| acyl-CoA dehydrogenase [uncultured marine bacterium EB0_50A10]
          Length = 438

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 121/402 (30%), Gaps = 34/402 (8%)

Query: 74  ARMANYNTPQLHAYGPGGERWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQA 132
           A M  +  P+   Y       + +  +P W+  L   +    L      + + P      
Sbjct: 51  AFMDEHIYPRERDYDEFTSDQNNLWQYPDWYEELKEEAKKQELWNLFLPKEYAPWSPGLT 110

Query: 133 HKIRAARLYLMAQLEAGH----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188
           +   A     M++           +P   +  ++A   TP   K W   + + E      
Sbjct: 111 NLEIAGLFETMSRSAWSQQIFNCNAPDRGNMEVLAKYGTPEQQKQWLEPLLAGEIR---- 166

Query: 189 APMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI 244
                        +TE     +D   +  +  +  D  Y L+G KW+ ++   P     +
Sbjct: 167 ---------SAYAMTEPDVASSDATNMELEITRDGDE-YVLNGKKWWTTNVITPKCKFML 216

Query: 245 MLAQVEGRVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVE--LEFSNTFGFLLG- 300
           ++ +             ++      G    R    +G   +   E  + F N    +   
Sbjct: 217 VMGKSNPENPRHTQHSTIIVPTDAEGFTITRALRSLGELHSPGGEGDVVFKNVRVPVSNL 276

Query: 301 --DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
                      +          A+M V   + SL      A+ R   G  L  +  ++  
Sbjct: 277 ILGEGRGFEIAQGRLGPGRFQYAMMFVGMAQRSLELMCERAQSRVAFGEALSKKTSVQHE 336

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IA    DI     L    A   D       +AA       + K    KM   V + A++ 
Sbjct: 337 IARSRCDIEQCRLLVLSAAEKMDN---YGIDAAR--DYISMLKIVAPKMCEDVSSRAIQI 391

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            GG G  ++  +A  +  S    I  G     +  +  L  +
Sbjct: 392 FGGMGVSQDTPLAHIFTTSRFCRIADGPDEVHMSQLAKLTMR 433


>gi|154270945|ref|XP_001536326.1| hypothetical protein HCAG_08647 [Ajellomyces capsulatus NAm1]
 gi|150409549|gb|EDN04993.1| hypothetical protein HCAG_08647 [Ajellomyces capsulatus NAm1]
          Length = 434

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 119/351 (33%), Gaps = 34/351 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAGHLMSPSVTSASM 161
           H L      DG                 +      +      A L     +  +V +   
Sbjct: 83  HELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQSGAGLAGAQSIHANVYATQP 142

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           VA   T    +   P++ + +Y              +  G+TE   G +   + ++  + 
Sbjct: 143 VAKFATEEQRQQMLPRLIAGDYR-------------VCFGVTEPNTGLETLKLRTEAIRD 189

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLCYQRL 275
            D         W  S+ ++   ++LA+       +     +     D      GL  +++
Sbjct: 190 GDS--------WISSAQVARRMVLLARTTPLEEVKKPSEGLSLFFIDFDKDAPGLELRKI 241

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           K K+G R+    E+ F N       L+G        V           A  ++    V+L
Sbjct: 242 K-KMGGRAVDANEVFFDNYRIPADSLIGREGDGFKIVLHGMNAERCLLAGEALGLGYVAL 300

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAA 391
            +A  YA+ R V G  +     +   +AD  +++ AA   ++   N +D AK  +S    
Sbjct: 301 EKAAKYAKERIVFGRPIGQNQAIAHPLADAYMNLEAAKLATYHATNLYDAAKTDKSITQK 360

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +     KY   + A      A+   GG GY +E ++ R+ RE     I
Sbjct: 361 AVGVACNSAKYLAAEAAFTACERAVLAHGGMGYAQEYNVERYLRECFVPRI 411


>gi|302522485|ref|ZP_07274827.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
 gi|302431380|gb|EFL03196.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. SPB78]
          Length = 435

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 114/355 (32%), Gaps = 26/355 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L  R    G+     D +  P        +    +  +    A      +  +   V   
Sbjct: 96  LRGRIAELGITGEEGDDAGVPARSSLFRGLLGMEMARVDPSFATFFGVHAELAMGSVRAC 155

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDG 224
            +      W P +   E                   LTE   G+  AA +T+  ++  D 
Sbjct: 156 GSEEQKARWLPAMTRWE-------------KLGAFALTEPLVGSGTAAGLTTTARREGDT 202

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW  +   +D  ++ A+             + +    GL    + +KI  R  
Sbjct: 203 WVLDGEKKWIGNGSFADLLVVWARDVADDQVKG---FVVEHGAAGLSADVIPHKIALRGV 259

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
               L            L  +    +  ++L       A  +      +   A  YA  R
Sbjct: 260 QNAHLALDGVRVPETDRLQHAESFADTNRVLRVTRAAVAWTATGCALGAYEAARAYAVER 319

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  +    +++  +A +  DI A  +L+ RLA   ++ +    +AA A++       
Sbjct: 320 EQFGRPIGSFQLVQDNLARMLADITACQSLAVRLAALEEKDELSDAQAALAKM------- 372

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           +C       +A A E +GG+G + +   AR + ++ A     G+ +   L V   
Sbjct: 373 FCTTRMRETVARAREVLGGNGILLDHDAARFFADAEALYSYEGTRDMNSLIVGRA 427


>gi|325000643|ref|ZP_08121755.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1]
          Length = 390

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 134/417 (32%), Gaps = 40/417 (9%)

Query: 52  SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSI 111
           +  H +   L   V          +A+Y     H  GP    +D+    P W     RS 
Sbjct: 6   APDHDDRPALAPLVKELRHYLSGELADYERE--HGLGPESH-YDRSVLQPVWK----RSR 58

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS---ASMVALMTTP 168
             G +       +                   +     H +   +     A  +    TP
Sbjct: 59  ELGFYGVHLPPEYGGRGLTATELAVLKEEVGASGRALSHSVLGDMGGPLRAGPIFRYATP 118

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
                +               P+ +   A    LTE   G+D+ A+ +      DG + L
Sbjct: 119 AQLDRYL-------------VPVVEGDRACCFSLTETDAGSDVRAMRTTATPDGDG-WRL 164

Query: 229 SGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNAT 286
           +G K F S+   +D  +++A++ G    +     L D    G      +  + G      
Sbjct: 165 TGKKVFSSAGPFADFSVLVARMAGTEDTY--SAFLVDLDAPGCTVLPGEVPLSGQH--IE 220

Query: 287 VELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            ++E    +     LLG +               L      +   R  +   + +AR R 
Sbjct: 221 SDIELDGCYVGPDQLLGSVGDGLTIGLGRVTTNRLLHCPTILGHARRVIQLTVEHARTRR 280

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V GG L D   ++  +AD+A    AA ++++      D  ++   EA          K +
Sbjct: 281 VFGGTLADLQSIQHKLADMATTYYAARSMTYDALADLDAGRAPRTEAFM-------CKLF 333

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             +    +  EAM+  G +G ++   I   +R      IL GS       +   L +
Sbjct: 334 VAENVFRIADEAMQIHGKAGMVQGSEIEWMFRRLRMFRILTGSSEIQKNGIAKDLLR 390


>gi|119483148|ref|XP_001261602.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119409757|gb|EAW19705.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 436

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 111/346 (32%), Gaps = 19/346 (5%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           +  H  L    W     P     A    +    +M  +           +       T P
Sbjct: 75  KEFHAALAKDGWLGIALPERLGGAGLGISEATMMMQTITQSGAGMAGAQAIHANVYATQP 134

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY-- 226
                   K  ++E        +   +     G+TE   G +   + +   K + G Y  
Sbjct: 135 ------LAKFGTKEQLEETIPKIINGTWRTCFGVTEPNTGLETLKLKTTATKNASGDYYS 188

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLCYQRLKNKIG 280
                 W   + ++   I+LA+       +     +     D      GL  +++K K+G
Sbjct: 189 VTGQKIWITCAQVASKMILLARTTPVEEIKRSTHGLSMFCIDLDRDKPGLDMRKIK-KMG 247

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R+    E+ F +       L+G+ N     +           A  ++     +L  A  
Sbjct: 248 GRAVDANEVFFDHYQIPAKTLVGEENEGFKIILHGMNAERCLLAGEALGLGYAALERATE 307

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIM 396
           YA  R V G  +     +   +AD  + + AA   ++  A  +D +++ S        + 
Sbjct: 308 YANDRVVFGRPIGQNQGIAHPLADAYMKLEAAKLATYHAARLYDASRTDSSIPFHSVGVA 367

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               KY   + A      A+   GG GY  E  + R+ RE     I
Sbjct: 368 CNSAKYIAAEAAFTACERAVLTHGGMGYAMEYDVERYLRECLVPRI 413


>gi|15925936|ref|NP_373469.1| hypothetical protein SA0225 [Staphylococcus aureus subsp. aureus
           N315]
 gi|13700148|dbj|BAB41447.1| SA0225 [Staphylococcus aureus subsp. aureus N315]
          Length = 403

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLLSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKKTGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|260807431|ref|XP_002598512.1| hypothetical protein BRAFLDRAFT_118308 [Branchiostoma floridae]
 gi|229283785|gb|EEN54524.1| hypothetical protein BRAFLDRAFT_118308 [Branchiostoma floridae]
          Length = 766

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 122/384 (31%), Gaps = 43/384 (11%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
              G         P    +  ++  +GL                A        Y      
Sbjct: 401 NRWGA-------PPIVDEIRAKAKAEGLWNLFLPSVSGLSQLDYAFVAEEMGRYGKMGSM 453

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR- 206
             +  +P   +   + L  TP   K W               P+ +  +     +TE   
Sbjct: 454 PFNCSAPDTGNMETIHLYGTPEQKKTWLE-------------PLLEGKIKSCFAMTEPDV 500

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR------ 260
             +D   +    ++  +  Y ++G KW+ S         +A + GR G   +PR      
Sbjct: 501 ASSDATNMQCSIERQGNE-YVINGKKWWTSGAGH-PHCKVAVLMGRTGDSKMPRHRQHSM 558

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNTFGFLLGD---LNVSTGPVEDMKIL 315
           +L      G+   R     G         E+ F+N    +              +     
Sbjct: 559 ILVPMDAPGVKIIRALTVFGYDDAPHGHCEVHFTNVRVPVTNMLLGEGRGFEIAQGRLGP 618

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +   +  +     +L      A +R   G  +I+Q V++  IA+  + I  A  L  +
Sbjct: 619 GRIHHCMRLIGMAEKALEAMCERAAKRRPFGKRIIEQEVVQHDIAEARMAIEQARLLVLK 678

Query: 376 LANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
            A+  D    K   +E A  +I+AP       +MA  VI  A++  GG+G  ++  +A  
Sbjct: 679 AAHMVDTVGTKKARKEIAMIKIIAP-------RMAVRVIDRAIQVHGGAGVCQDFHLAGM 731

Query: 434 YRESPANSILLGSGNAMVLDVLNL 457
           Y  +    I  G     +  V  +
Sbjct: 732 YAGARTIQIADGPDEVHLTAVAKM 755


>gi|118588686|ref|ZP_01546094.1| putative acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
 gi|118438672|gb|EAV45305.1| putative acyl-CoA dehydrogenase [Stappia aggregata IAM 12614]
          Length = 386

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 113/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +     +G   ++    +                   A       
Sbjct: 28  RKIDEARTYPE--EFVDALTREGWMAALIPEEYGGSGLGLTEASVIMEEINRAGGN-SGA 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + + + +    +    + + PKI S E                 +G+TE   GTD 
Sbjct: 85  CHGQMYNMNTLVRHGSEEQRRTYLPKIASGELR------------LQSMGVTEPTTGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   K  D         W      SD  I+LA+       +     +   L D   
Sbjct: 133 TRIKTTAVKKGDRYVVNGQKVWISRVQHSDLMILLARTTPLAEVQKKSEGLSIFLVDIRQ 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  + + N + N    T EL F N       L+G+       +           A
Sbjct: 193 AMKSGMEVRPILN-MVNH--ETNELFFDNLEIPEENLIGEEGKGFKYILTGLNAERTLIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +        + I Y R R V G  +     ++  IA+  +++ AA  + ++  + FD
Sbjct: 250 AECIGDGYWFTDKVIDYVREREVFGRPIGQNQGVQFPIAEAFIEVEAANLMRYKACSLFD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                  EA  A+ +A    +             ++  GG G+  E  + R +RE+    
Sbjct: 310 AGAPCGAEANMAKYLAAKASW-------EAANACIQFHGGFGFACEYDVERKFRETRLYQ 362

Query: 442 I 442
           +
Sbjct: 363 V 363


>gi|39934831|ref|NP_947107.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
 gi|39648681|emb|CAE27203.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009]
          Length = 443

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 128/440 (29%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    LVA +A     +  +++ L        A +  R  ++           G     
Sbjct: 22  FSLPPDLVAYLAELDRFIESKIKPL------EQADDNIRFFDHRREWARTDFEHGGLPRH 75

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQL 146
            W+ +            +   G       + +                  A  L L   L
Sbjct: 76  EWEDLL-----RKAKNLADDAGHLRFAIPKRYGGQDGTNLWMAVIREHFAAKGLGLHNDL 130

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +     M+ L  +P         +                   I  GLTE  
Sbjct: 131 QNEHSIVGNFPIVKMLDLYGSPEQKA-----MIDG---------SITGKYRITFGLTEPD 176

Query: 207 GGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++ +   +     + ++G K + +         + A+  G+ G    +   
Sbjct: 177 HGSDATHMETRAEEAVRDGKKGWVINGEKMWTTGMHVATHCALFARTAGKDGDARGITCF 236

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F + F     + G++       +       +
Sbjct: 237 LVPADAPGVKVEEYLWTF-NMPTDHPRVSFKDVFVTEDAVFGEVGRGLSLAQCFVHENRI 295

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E++ YAR R   G  L     ++  + ++A        L  + A 
Sbjct: 296 RQAASSLGAAVFCINESVKYARERKPFGEELARNQAIQFPLVELATQAEMLRLLIRKTAW 355

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 356 EMDQMTQAQVEHTLSDK-VSMCNYWANRLCGQAADRAIQVHGGIGYSRHKQFEHIYRHHR 414

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 415 RYRITEGSEEIQMRKVAGFL 434


>gi|306826154|ref|ZP_07459489.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431630|gb|EFM34611.1| glutaryl-CoA dehydrogenase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 425

 Score =  170 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 145/425 (34%), Gaps = 44/425 (10%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCT-AQELARMANYN-TPQLHAYGPGGERWDKVEFHP 101
             ++              G  +      QE  R+   +  P ++ Y      W+K +F  
Sbjct: 28  EEILRELYPEDLFHYAD-GLTLGEAEVLQETRRLIEKHLRPVINEY------WEKPDFP- 79

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---S 158
            +      +    +  +           K +    A     +A+ +A      +V     
Sbjct: 80  -FEEFYAVAKGAQIMNNPKLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLC 138

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQ 217
            + + L    R  K++ PK+ + ++                  LTE   G+DIA  + + 
Sbjct: 139 YNTILLGGDERQQKEFLPKLAAFDWQG-------------CFALTEPLSGSDIAGGLATT 185

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRL 275
            +++ D        +W   S  +D   + A+   +G+V CF+V          G   + +
Sbjct: 186 AERVGDKWILNGEKRWIGGSDTADVVPVFARDVADGKVKCFIV-----RKGAPGYHAEPI 240

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
            +KI  R      +   N        L    G  +  +IL     D A +++     S  
Sbjct: 241 PHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDVARILTFTRADVAHIAMGVTCGSYV 300

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YA+ R      +    +++  +A +  +  A  A S R+A   ++       +A A
Sbjct: 301 AALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAVIAYSTRIAEMQEKGNELMLNSALA 360

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++   +            +A A E  GG+G   E  +AR + ++ +     GS     L 
Sbjct: 361 KMHNSLVM-------RETVALARETCGGNGITLETDVARFFADAESIYTYEGSHEVNALI 413

Query: 454 VLNLL 458
           V   +
Sbjct: 414 VGREI 418


>gi|327350387|gb|EGE79244.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 490

 Score =  170 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/451 (15%), Positives = 127/451 (28%), Gaps = 44/451 (9%)

Query: 49  NFPSVVHKELELLGEYVLSCTA-QELARMANYNTPQLHAYGPGGERWDKVEFH-PAWHAL 106
           + P+ +   +  L +++ +     + AR  N        +      WD        W AL
Sbjct: 11  HLPADLVSYISSLDKFIENTILPLQHARDNNRFFDYRREHART--DWDNGGLPRKEWEAL 68

Query: 107 LRRSI----HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           L ++      +G +     + +        +    A  Y +A                  
Sbjct: 69  LAQARKLSDQEGFYRFSLPKIYGGQANPNTNLWMCAIRYHLASHPVYGGGVSLANDLQNE 128

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
             +              + E   T      K       GLTE + G+D   + +  + + 
Sbjct: 129 HSVIGNFPIVLMLHHFGNEEQRSTLIPAHLKGQFRATFGLTEPKHGSDATFMETAARPVQ 188

Query: 223 -------------DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPN 268
                        DG       KW   +      I+ A+  G  G    +   L      
Sbjct: 189 REYPAGSGAANAVDGFVINGAKKWQTGAHNCTHMIIFARTSGAPGSARGITAFLVPRETP 248

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           G+     +  + N       +   + F     +LG+L+      +       +  A  S 
Sbjct: 249 GVNILSYEWTL-NMPTDHATVALEDVFVPRSAVLGELDRGLAIAQTFVHENRIRQAASSC 307

Query: 326 SGMRVSLAEAIHYARRRHV--SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE- 382
              R  L +AI YA  R +   G  L D   ++  + ++   +     L  R     D+ 
Sbjct: 308 GAARFCLDKAIEYANEREIWGKGKTLSDNQAIQFQVVELMTQVEMLRLLILRTGWEMDQV 367

Query: 383 ---------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
                           K   E          +  +W  ++       A++  GG+GY   
Sbjct: 368 TAECGGHIDSPVPGSKKPWVEIEKRLTHKVAMCNFWANRLCCQAADRAIQIHGGNGYSRH 427

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +     YR      I  GS    +  +   L
Sbjct: 428 KPFEHIYRHFRRYRITEGSEEIQMRKIGAYL 458


>gi|296394156|ref|YP_003659040.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296181303|gb|ADG98209.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 409

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 25/278 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +      D  Y ++G K + ++   +   ++ A V+  
Sbjct: 133 GKKWAAMAITEPGCGSDSAAIRTTATLDGDE-YVINGEKIYATAGSRASHIVVWATVDKS 191

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
           +G   +   +      G+   R+++K+G R++ T  L F N            ++NV  G
Sbjct: 192 LGRAAIKSFVVPRDTPGVNLIRVEHKLGIRASDTAALIFDNVRVPKENLLGSPEVNVEKG 251

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI--DQPVMKRAIA--- 360
               M+         A M++   R +L + +        +G  +     P ++ A A   
Sbjct: 252 FAGVMQTFDNTRPVVASMAIGVARGALEDLLEILTE---AGVEISYDKPPHVQHAAAAEY 308

Query: 361 -DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  +  AA  L+ + A   D     S EA+ A+  A        +M   V  +A+E  
Sbjct: 309 LRLEAEYEAAYLLTLKSAWMADNKMPNSREASMAKAKAG-------RMGSDVTLKAIELA 361

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
           G  GY +   + ++ R++    I  G+     L V   
Sbjct: 362 GLYGYSQRALLEKYGRDTKIFDIYEGTQQIQQLIVARR 399


>gi|126435792|ref|YP_001071483.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|126235592|gb|ABN98992.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 383

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 122/356 (34%), Gaps = 49/356 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +     G         +         +I    L          ++SP++   +++  
Sbjct: 40  ELWQAVGKQGFLGVNLSEQYGGGGGIYDMQIVGEELAAAGCPLLMTVVSPTIC-GTIIQA 98

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + W P I S E               +   +TE   G++   I++  ++  D 
Sbjct: 99  FGSEELKQQWLPGIASGE-------------TIMAFAITEPDAGSNSHNISTTAKRDGDD 145

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC--------YQR 274
            + ++G K+++S    ++A +++ +      G  L+  L+      GL            
Sbjct: 146 -WVINGTKYYISGVDEAEAILVVTRTSTNDSGRGLLSLLVVPTDVPGLTKSLIPVQAVTP 204

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            K            L F +       L+G  N     V        +  A +     R +
Sbjct: 205 EKQ---------FTLFFDDVRVPAANLIGAENEGLRQVFMGLNPERIMGAALGNGIGRYA 255

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YAR RHV G  +     +   +A   + +  A  ++ R A+  D     S EA+
Sbjct: 256 LDKAADYARNRHVWGTPIGSHQGVSHPLAHAKIQVELARLMTQRAASLHDAGDPGSGEAS 315

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI------ARHYRESPANS 441
                  + KY   +     + +A++  GG+G   E  +      AR  R +P + 
Sbjct: 316 ------NMAKYAAAEAGILALDQAIQTHGGNGMATEYGLATLWGPARLMRTAPISR 365


>gi|325271301|ref|ZP_08137836.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
 gi|324103560|gb|EGC00872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp.
           TJI-51]
          Length = 395

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 69/333 (20%), Positives = 122/333 (36%), Gaps = 44/333 (13%)

Query: 242 AFIMLAQ-VEGRVGCFLVPRLLED----------GSPNGLCYQRLKNKIGNRSNATVELE 290
             ++LA+  +   G   +   +            G  N +    L +K+G R   +  L 
Sbjct: 4   VHMVLAKLPDAPPGVKGISLFIVPKYHVNPDGSCGPRNDVLLAGLFHKMGWRGTTSTALN 63

Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F +     G+L+G  +     +  M     +   + +V         ++ YAR+R   G 
Sbjct: 64  FGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQ-GR 122

Query: 348 ------------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---- 391
                        +I    +KR +      +  A  L    A  FD+ ++ S+E+A    
Sbjct: 123 LPDNKDPHSSAVPIIQHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTGSDESARNEA 182

Query: 392 --YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                ++ PI K W           A++ +GG GY  E  + ++YR++  N I  G+   
Sbjct: 183 QELLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGI 242

Query: 450 MVLDVLN--LLEKGTNLFEQLFSTLEQDLG-SSGKKVITILRDSI-SLCKEDKGLARFLT 505
             LD+L   L +      +QL   +      +S    +  LR  +  L    +G+   L 
Sbjct: 243 QSLDLLGRKLAQNNGAGLKQLLRRIAATGERASHHPNLDPLRQPLEQLVNRLQGVTLTLL 302

Query: 506 EKI-------ALASSAAALYRAGMNDIADVFLE 531
             +       ALA+SA  L   G   I   +LE
Sbjct: 303 GDLAQGKVTGALANSALYLKAFGHCVIGWRWLE 335


>gi|306828629|ref|ZP_07461823.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
 gi|304429237|gb|EFM32323.1| glutaryl-CoA dehydrogenase [Streptococcus mitis ATCC 6249]
          Length = 425

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 145/425 (34%), Gaps = 44/425 (10%)

Query: 44  VALIANFPSVVHKELELLGEYVLSCT-AQELARMANYN-TPQLHAYGPGGERWDKVEFHP 101
             ++              G  +      QE  R+   +  P ++ Y      W+K +F  
Sbjct: 28  EEILRELYPEDLFHYAD-GLTLGEAEVLQETRRLIEKHLRPVINEY------WEKPDFP- 79

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT---S 158
            +      +    +  +           K +    A     +A+ +A      +V     
Sbjct: 80  -FEEFYAVAKGAQIMNNPKLFEGREGSWKPSELYIAFLYLELARFDASMATFYTVHGGLC 138

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQ 217
            + + L    R  K++ PK+ + ++                  LTE   G+DIA  + + 
Sbjct: 139 YNTILLGGDERQQKEFLPKLAAFDWQG-------------CFALTEPLSGSDIAGGLATT 185

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRL 275
            +++ D        +W   S  +D   + A+   +G+V CF+V          G   + +
Sbjct: 186 AERVGDKWILNGEKRWIGGSDTADVVPVFARDVADGKVKCFIV-----RKGAPGYHAEPI 240

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333
            +KI  R      +   N        L    G  +  +IL     D A +++     S  
Sbjct: 241 PHKIALRCVRNGHITMKNVEVPDSDRLVNINGFGDVARILTFTRADVAHIAMGVTCGSYV 300

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A+ YA+ R      +    +++  +A +  +  A  A S R+A   ++       +A A
Sbjct: 301 AALKYAKDREQFKRPIAKFQIVQEKLARMQANAVAVIAYSTRIAEMQEKGNELMLNSALA 360

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++   +            +A A E  GG+G   E  +AR + ++ +     GS     L 
Sbjct: 361 KMHNSLVM-------RETVALARETCGGNGITLETDVARFFADAESIYTYEGSHEVNALI 413

Query: 454 VLNLL 458
           V   +
Sbjct: 414 VGREI 418


>gi|220924540|ref|YP_002499842.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           nodulans ORS 2060]
 gi|219949147|gb|ACL59539.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 409

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 75/442 (16%), Positives = 138/442 (31%), Gaps = 51/442 (11%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLR 108
             P  V      +  +V        A  AN+++ +                      L  
Sbjct: 4   TLPPRVEDYRARIAAFVADEILPVEADRANFDSHENIRLDLLA-------------DLRA 50

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--T 166
           R+   GL C             +            +        S +    +M+ L    
Sbjct: 51  RAKAAGLWCLQLRPETGGQGLSKVGMAACYTEMNRSIFGPVVFNSAAPDDGNMMVLEALG 110

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDG 224
           TP   + W   I S              +V     +TE    GG+D + I ++ ++  DG
Sbjct: 111 TPEQKQRWLEPIVSG-------------AVRSAFAMTEPHPGGGSDPSMIRTRAERGPDG 157

Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN-- 281
            Y + G KWF++    +  FI++A+         +   L      G    R    +G   
Sbjct: 158 RYRIYGRKWFITGAEDAAHFILIARTSDDPRH-GLTAFLFHRDQPGWEIVRRIPIMGPEE 216

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDSAIMSVSGMRVSLAEA 335
                 EL F    G  +   +V  G  + +K+         L   +  +      +  A
Sbjct: 217 HGGH-CELAFD---GLEIAPEDVLLGEGKGLKVTQVRLGPARLTHCMRWLGLAMRCVEIA 272

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
             YA  R   G  L D+  ++  +  +A+DI     L  R A   D+ +   +E + A+I
Sbjct: 273 RAYAAERKGFGMRLADRESVQLMLGGLAMDIEIGRLLVMRAAWELDQGRFARKEVSMAKI 332

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                 +    +        ++  G  GY ++  +   YR +    ++ G+     + + 
Sbjct: 333 HVANLLHRAADIG-------IQINGARGYSKDTVLEWIYRYARQARLVDGADEVHRMVLN 385

Query: 456 NLLEKGTNLFEQLFSTLEQDLG 477
             LE     F        +  G
Sbjct: 386 RHLESEGRDFFAWPKAGPEAAG 407


>gi|312137597|ref|YP_004004933.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325677431|ref|ZP_08157095.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311886936|emb|CBH46245.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325551678|gb|EGD21376.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 399

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 121/366 (33%), Gaps = 28/366 (7%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P    L   +   G+                AH             EA +  +PS  + 
Sbjct: 46  PPIVEELKAEARRQGMWNLFLPALSGLTHLDYAHIAEVTGRSPYIAPEALNCSAPSTGNM 105

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQG 218
            ++ +  TP   + W               P+    +  G  +TE     +D   I++  
Sbjct: 106 EILHMFGTPEQKQRWLE-------------PLLDGRIRSGFSMTEPDVASSDARNISTSI 152

Query: 219 QKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQR 274
            +  D  Y ++G KW+ +    P  +  +++ + +           +L   +  G+   R
Sbjct: 153 VRDGDE-YVINGRKWWTTGAADPRCEILVVMGKTDPDAAPHRQQSMILVPVATPGVEIIR 211

Query: 275 LKNKIGNR-SNATVELEFSNTFGFLLGD---LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
                G        E++F++    L              +       +  A+  +     
Sbjct: 212 SLPIFGYHDQQGHAEIQFTDVRVPLTNMLAGEGEGFAIAQARLGPGRIHHAMRCIGMAER 271

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L   +     R+  GG + DQ V++  IA+  ++I  A  L  + A   D        A
Sbjct: 272 GLELMVRRTMARNAFGGPISDQGVVRTWIAESRMEIEQARLLVLKTAWMIDR-----VGA 326

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
             A+I     K    ++A +V+  A++C GG G  ++  IAR +  +    I  G     
Sbjct: 327 KGAQIEIAAVKVIGPRVARSVLNRAIQCHGGGGVTDDFPIARMWASARILGIADGPDEVH 386

Query: 451 VLDVLN 456
           +  V  
Sbjct: 387 IRSVAR 392


>gi|255950794|ref|XP_002566164.1| Pc22g22700 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593181|emb|CAP99558.1| Pc22g22700 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 439

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 118/362 (32%), Gaps = 28/362 (7%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P       +  H  L    W     P     A    +    +M  +     
Sbjct: 72  QERDQQEKDP-------KEFHAALAKDGWLGIALPESLGGAGLGISEATMMMQTITQSGA 124

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 +       T P        K  ++E   T    +   +     G+TE   G + 
Sbjct: 125 GMAGAQAIHANVYATQP------LAKFGTKEQLETTIPNIINGTWRTCFGVTEPNTGLET 178

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSP 267
             +T+   K  DG        W   + ++   I+LA+       +     +     D   
Sbjct: 179 LKLTTLASKTDDGYSVTGQKIWITCAQVASKMILLARTTPLEEVKKSSEGLSLFCIDIDR 238

Query: 268 --NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              GL  +++K K+G R+    E+ F +       L+G+ N     +           A 
Sbjct: 239 ENPGLDLRKIK-KMGGRAVDANEVFFDHYKIPANTLIGEENQGFKIILHGMNAERCLLAG 297

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
            ++     +L +A  YA+ R V G  +     +   +AD  + + AA   ++  A  +D 
Sbjct: 298 EALGLGYAALEKASQYAKDRVVFGRPIGQNQGVAHPLADAFMKLEAAKLATYHAARLYDT 357

Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +      E   A   A   KY   + A      A+   GG GY  E  + R+ RE    
Sbjct: 358 NDGSVPFHEIGVACNSA---KYLAAEAAFTACERAVLAHGGMGYAVEYDVERYMRECFVP 414

Query: 441 SI 442
            I
Sbjct: 415 RI 416


>gi|17531909|ref|NP_495068.1| Acyl CoA DeHydrogenase family member (acdh-2) [Caenorhabditis
           elegans]
 gi|15617688|gb|AAL02437.1|U41279_5 Acyl coa dehydrogenase protein 2, isoform c, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 220

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 95/251 (37%), Gaps = 41/251 (16%)

Query: 214 ITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           + +  +K  D    L+G KW   ++P++D F++LA  +   G   V   + D    G+  
Sbjct: 1   MQTVAKKDGDHF-ILNGSKWGISNAPIADFFLVLANADPEKGYRGVTCFIVDRDHEGVVL 59

Query: 273 QRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
               + +G R+    ++  ++       ++G+         ++     L+++ + +    
Sbjct: 60  GEQDDNLGMRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEV-----LNASRIVIGAQM 114

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                                    ++  IA I  +I AA  + +  A   D      +E
Sbjct: 115 ------------------------GLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFVKE 150

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
           A+ A+  AP       ++A     + +E +GG G+ +     + YR++    I  G+ N 
Sbjct: 151 ASMAKYYAP-------EVACKTTKQCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNI 203

Query: 450 MVLDVLNLLEK 460
            +  +   ++ 
Sbjct: 204 QLNTIAKFIDN 214


>gi|326473737|gb|EGD97746.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818]
          Length = 399

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 123/367 (33%), Gaps = 28/367 (7%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
                  D+ E +P  H L      DG        S        +      +      A 
Sbjct: 26  DEYRAERDRTEEYP--HELHAALSKDGWIGIALPESLGGAGLGISEATMMLQTIAQSGAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L     +  +V +   VA   +    K   P++ + E+                 G+TE 
Sbjct: 84  LAGAQSIHANVYATQPVAKFASEEQKKRMLPRLIAGEWR-------------TCFGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRL 261
             G +   + +   K  D     S H W  S+ ++   I+LA+             +   
Sbjct: 131 NTGLETLKLRTVAVKDGDSYRLTSEHSWISSAQVAQKMILLARTTPVEEVNKPSEGLSLF 190

Query: 262 LEDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILI 316
             D      GL  +++K K+G RS    E+ F         L+G+       V       
Sbjct: 191 FIDFDRAAPGLDLRKIK-KMGGRSVDANEVFFDEYRIPADSLIGNEGEGFKIVLHGMNAE 249

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A  ++    V+L +A  YA+ R V G  +     +   +A   + + AA   ++  
Sbjct: 250 RCLLAGEALGLGYVALEKAAKYAKERVVFGRPIGQNQAIAHPLAAAYMSLEAAKLATYHA 309

Query: 377 ANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
              +DE+++ S        +     KY   + A A    A+  +GG GY +E  + R+ R
Sbjct: 310 TKLYDESRNDSSITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGMGYAQEYHVERYLR 369

Query: 436 ESPANSI 442
           E     I
Sbjct: 370 ECFVPRI 376


>gi|158520946|ref|YP_001528816.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus
           oleovorans Hxd3]
 gi|158509772|gb|ABW66739.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans
           Hxd3]
          Length = 541

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 89/467 (19%), Positives = 165/467 (35%), Gaps = 53/467 (11%)

Query: 34  MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY-----NTPQLHAYG 88
           ++ Y +D  +  +I  F     ++++          +     +A       N P +  Y 
Sbjct: 22  VDYYQADPFVQKMIRVFAGDEAEKVDAEAAAFSKKVSFRWRDLAERIATPDNRPYMMHYD 81

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
               R D++   P    ++ + +        W         K +   R  +LYL++Q   
Sbjct: 82  GHKNRIDRI-VRPYEIEVMEKEV----FAEAW------FSPKTSLWTRFIKLYLLSQNSE 130

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L+ P      ++       + + +A    +R      +  +          ++E +GG
Sbjct: 131 AGLVCP------LICTWGMADLLEKYADTPETRHILEHTRDGINGEFAIGAQFVSEIQGG 184

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLL---- 262
           +D+ A   +     DG + L G K+F S+  +D  ++ A+ +G   V  F++P  L    
Sbjct: 185 SDVPANLLEAV-EEDGRWRLYGTKFFCSAAHADYSVVTAKPKGSEEVALFVIPMWLDGNR 243

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSA 321
           E    NG    RLK K+G     T E+ F+    + +G LN     V  + +    L  +
Sbjct: 244 EKEIRNGFTIDRLKWKMGTVELPTAEITFNGAAAYPVGPLNRGVANVVGIVLTCSRLALS 303

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI---ADIALDIAAATALSFRL-- 376
           I S  GM   L E   Y   R   G  L D P+M       A       A     ++   
Sbjct: 304 IGSAGGMARGLREVEKYGEFRTAFGIALKDFPMMAAQYLTNAGCVRRTIAGNFKVYKAFI 363

Query: 377 -----------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
                            ++  DE     +     R +  + K    + A  +    +   
Sbjct: 364 ELPGGLSVGLDGGGLSVSSKADEPPELRKHRFDVRQLILLQKITVARDAIDLSRLGISAF 423

Query: 420 GGSGYIEER-SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           GG G +E+  S  R +R+   N +  G  N ++  +    +K  N +
Sbjct: 424 GGHGVMEDFSSFPRMFRDGMVNELWEGPRNVLLTQLFMDFQKVRNWY 470


>gi|171317253|ref|ZP_02906451.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
 gi|171097572|gb|EDT42408.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
          Length = 1268

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 147/418 (35%), Gaps = 33/418 (7%)

Query: 114  GLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172
            G+     DRS   +       +R  ++L  +    A      +      +     P +  
Sbjct: 660  GVLGMQVDRSCGGLGLGHRDMLRVISQLATIDSTLAFFAGLNNTLGILPIMRHAQPALRD 719

Query: 173  DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232
            +  P++ +               +     +TE   G+   A+TS+ ++I  G + +SGHK
Sbjct: 720  ELLPQLATG-------------RMLAAFAITEPGAGSHPRAMTSRARRIEGGDWLVSGHK 766

Query: 233  WFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291
             +  SS  +    + ++     G   +          G+     +  +G R      +  
Sbjct: 767  CWSGSSAWAGIINVFSRRADGAGMVGLA---VRPGTPGVRIGAEELTMGVRGMIQNSIHL 823

Query: 292  SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
                      LG+L       ++      L  A +    M+        Y  RR ++ G+
Sbjct: 824  DRARISDACRLGELGQGMTVAQEAMNSARLGIAAICTGVMKRCAQLMHRYGARREIATGL 883

Query: 349  LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
            L+D P+ ++ + D+   IA   AL   LAN  D      E+A        I K    ++ 
Sbjct: 884  LLDNPLSRQRLGDLRHRIAGLNALVDHLANDLDNGGDVPEDALL------IAKILGSELL 937

Query: 409  PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468
               + E M+ +GG GYIE     + +R++    I  G    +++ + + L  G++     
Sbjct: 938  SQSVDEMMQFLGGRGYIETNLAPQIFRDARLTRIFEGPTETLLVHLGSRLLNGSDDLPDY 997

Query: 469  FST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                     L ++L   G++++T    + S        A ++       +  A L   
Sbjct: 998  LERHLDAAVLARELRELGEEMLTDGLTNASNLGGAAHAAIWVDYWFGAVAQWALLLAV 1055


>gi|170735338|ref|YP_001774452.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821376|gb|ACA95957.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 388

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 122/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                R D    +P   A +      G   ++  + +         +       +     
Sbjct: 26  DEYWRRIDHERVYPE--AFVDALTKAGWMAALIPQEYGGSGLGLT-EASVIMEEINRNGG 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    +    + + PKI S E                 + +TE   
Sbjct: 83  NSGFCHGQMYNMNTLLRNGSEVQKRKYLPKIASGELR------------LQSMAVTEPTT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLL 262
           GTD   + +   K  DG Y ++G K ++S    SD  I+LA+       +     +   L
Sbjct: 131 GTDTTKLKTTAVKK-DGRYVVNGQKVWISRVQHSDMMILLARTTPLSDVKKKSDGLSCFL 189

Query: 263 EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            D      NGL  + + N + N    T EL F N       L+G+       + D     
Sbjct: 190 VDLHHAIGNGLTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGKGFKYILDGLNAE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      +  A  YA  R V    +     ++  IA+  +D+ AA  + ++ 
Sbjct: 247 RALIAAECIGDGYWFVDRASKYASERIVFDRPIGMNQGIQFPIAEAYVDVRAADLMRYKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD  ++   EA  A+ +A    +             ++  GG G+  E  + R +RE
Sbjct: 307 CELFDNHQACGAEANMAKHLAATASW-------KAANACLQTHGGFGFACEYDVERKFRE 359

Query: 437 SPANSI 442
           +    +
Sbjct: 360 TRLYQV 365


>gi|160897326|ref|YP_001562908.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160362910|gb|ABX34523.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 388

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 121/362 (33%), Gaps = 30/362 (8%)

Query: 99  FHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSV 156
             P +           GL    +  +         H + A   + L+    A  + + + 
Sbjct: 33  HSPHYPWETASLLAEQGLLGIAFPEADGGQGGSLMHAVLAIEQVALVCPKSADIVQAGNF 92

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                            + P + +                 I LG+TE   G+ +  + +
Sbjct: 93  GPIRTFVEYADAAQKARFLPDLLAG-------------KKLISLGMTEPDAGSAVTELRT 139

Query: 217 QGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
                 D  Y ++G K F +  P +D F++  +     G   +  +L +    G+   + 
Sbjct: 140 TATLEGDH-YVINGSKVFSTHSPEADLFLVYVRF--GPGVDGIGSVLVERGTPGVEVGQP 196

Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLA 333
              +        +L F N        L  + G  +      +  L +A  +++  R +  
Sbjct: 197 SAFM--NGEQWAQLYFENCRIPRENVLLGAGGFKKQISGFNVERLGNASRALALGRHAFN 254

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +AR R   G  L +   ++   AD+ + +  A  L ++ A   +     ++  A A
Sbjct: 255 LAREHARVRRQFGRELCEFQGLQWKFADMWMKLEQAQLLLYKAALEGEHGLPSAQSTAMA 314

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           ++   +  +        V  EAM+ +GG G+ +E  +    R +    I  GS   +   
Sbjct: 315 KLACNLAGW-------EVSNEAMQVMGGLGFSQEALVEYCVRRTRGWMIAGGSIEVLRNR 367

Query: 454 VL 455
           + 
Sbjct: 368 IA 369


>gi|257791596|ref|YP_003182202.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta
           DSM 2243]
 gi|317487991|ref|ZP_07946573.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
 gi|257475493|gb|ACV55813.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243]
 gi|316912893|gb|EFV34420.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp.
           1_3_56FAA]
          Length = 382

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 110/287 (38%), Gaps = 15/287 (5%)

Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240
            E+    K   +   +   L ++E   G+D   + +   +  D    L+G K ++++   
Sbjct: 102 GEFADVLKDYRETGRLLFALAISEPEAGSDAMNMQT-YTRTVDEHLILNGRKTYVNNGEY 160

Query: 241 DAFIMLAQVEGRVGCFL----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294
             +IM+A ++           +   L      G+    + NKIG        L F N   
Sbjct: 161 APYIMVAAIDRDCEAPGKYPPMTFWLLPRDLKGVSAYPI-NKIGQSMLPFATLVFDNVEL 219

Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              + L         +  +     + +   S+   R ++ +A+ +AR R   G  +    
Sbjct: 220 SPAYRLNGRQEGFRQLFRLLEFGRVFTCASSLGMARAAMEDAVAHARSRKAFGVQIGRFQ 279

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +++ + D+ + I   +++ +R A + D             +   + K +    A  V +
Sbjct: 280 QIEQMLTDMEVSIYNMSSMLYRAALAVDNGGPDER------LSVALMKRYVPDAATEVAS 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            AM+ +GG GY E   +++ +++   N I  G+   MV     L+ +
Sbjct: 334 SAMQILGGMGYTEGARVSQLWQDCRGNQIAEGTDQIMVYIASPLIME 380


>gi|331697876|ref|YP_004334115.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952565|gb|AEA26262.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 383

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 107/358 (29%), Gaps = 27/358 (7%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165
           L       GL        F             A     A   A +L+  S     ++   
Sbjct: 41  LAGELGAMGLTGLRAPERFGGQDADAVTTGLVAEEVSRADFNACYLVLNSALVTDILLAG 100

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225
            T      W P I S E+ P              L LTE   G+D A +  + +   DG 
Sbjct: 101 ATEEQLAGWLPPIASGEHVP-------------ALCLTEPGHGSDAAHLQLRAEPDGDGW 147

Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRS 283
                         +    + A+  G  G   V   + D       L    L +  G+R+
Sbjct: 148 RLFGEKTSISLGMYAHVGAVFARTGGE-GARGVSAFMVDLSDPDPDLARSPLDDH-GSRA 205

Query: 284 NATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
                L F         L+G        V            +M +     +L +A  YAR
Sbjct: 206 IGRASLYFDGVRVGRDQLVGGEGEGFVSVMRGFDYSRAVIGLMCLGIASAALDDAFAYAR 265

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +     +   + + A  + AA  L +      D  +  +  A  A+  AP  
Sbjct: 266 EREAFGQPIGRFQGLAFPLVECATQLRAARHLCYEALALKDAGEDPAVPANMAKWWAP-- 323

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                K+A  ++ +++   G + +  +    +  R+     I  G+     L V   L
Sbjct: 324 -----KLAADIVHQSLLTFGHAAWSTDNPQGQRLRDVIGLEIGDGTAQIAKLVVARHL 376


>gi|63002603|dbj|BAD97695.1| Aft10-1 [Alternaria alternata]
          Length = 432

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 119/353 (33%), Gaps = 30/353 (8%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL--EAGHLMSPSVTSASMVALMTT 167
           ++ + +H         P    + H +  A              L   +  +  ++    T
Sbjct: 79  AVKEHMHDVRLPGDVPPREWDEFHGLIVADEVARCGSLGVLWALGCGTAIACPILVNYGT 138

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
                 + P +   E                 LG+TE   G+DIA + ++ ++  +    
Sbjct: 139 EEQKAKFLPPVIHGE-------------SRFCLGITEPEVGSDIANLVTRAEQEGNYFIV 185

Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287
               KW  +   +D + + A   G+ G   +  L       G+  +++++  G  S  T 
Sbjct: 186 NGTKKWVTNGTFAD-YCIAAVRTGQAGRTGISLLNIPLDVAGVSREKIESS-GVASGGTA 243

Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARR 341
            + F N    +    N+     +   +L+          A   +   RV L +A  YA  
Sbjct: 244 SITFDNVQVPV---ENLLGEKNKGFYMLMSSFDHHRSWIAANCLRLARVCLEDAYQYALT 300

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-IMAPIT 400
           R   G  LI+   ++  +A+I + I ++ AL   L         +  +       +  IT
Sbjct: 301 RQTFGKPLINHQTIRLKLANIGIQITSSYALLESLTEMRQNLSVKMGQVHRGIGGLCAIT 360

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRESPANSILLGSGNAM 450
           K    +     + E+ + +G S Y        + R  R+     I  GS   +
Sbjct: 361 KVAAARTFELAVRESQQIMGASAYTRTGPGLRVERLSRDMRVLVIGGGSEEIL 413


>gi|268531242|ref|XP_002630747.1| Hypothetical protein CBG02437 [Caenorhabditis briggsae]
          Length = 373

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 122/361 (33%), Gaps = 57/361 (15%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---S 160
             LL  +    L     D  +     + +    A  +  +++++    ++  + +A    
Sbjct: 62  KNLLEEAFRLKLMGLEVDEEYGGS--RGSFFDVALTVEEISKVDPAVALTIHLQNALIAP 119

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M++   +    + +  ++               T       L+E   G+D  A+ +   K
Sbjct: 120 MLSNYGSEEQKEHYLKRVC--------------TDSIESFALSETISGSDAFAMKTTATK 165

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D            ++P++D F++LA  E   G   +   L D +  G+   +    +G
Sbjct: 166 DGDDFVINGSKLGISNAPIADFFLVLANAEPEKGHRGITCFLVDRNQTGVVVGKKDQNLG 225

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYA 339
            R+    ++ F+N          +     +  K  I  L+++ + +              
Sbjct: 226 MRA--RTQVYFNNVRVPNSA---ILGEYGKGYKYAIDILNASRILIGAQMF--------- 271

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
               +SG    +           + +I AA  + +  A   D      + A+ A+    +
Sbjct: 272 ----LSGNSTPN-----------STEIEAARLMVYNSARMKD-GGPLVKAASMAKYSRGV 315

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459
                 K       + ++ +GG G+ ++    + YR+S    I  G+ N  +  +   ++
Sbjct: 316 IASKTSK-------QCIKWLGGIGFTKDFPAEKFYRDSAVGGIYEGTSNIQLNTIAKFID 368

Query: 460 K 460
            
Sbjct: 369 N 369


>gi|91777551|ref|YP_552759.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gi|91690211|gb|ABE33409.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 387

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 115/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +      G   ++  + F                   A       
Sbjct: 29  RKIDEARGYPE--EFVDALTKAGWLAALIPQDFGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + PKI   +                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSEEQKQKYLPKIACGDLR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +  ++  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TKIKTTAERRGDRYVINGQKVWISRVQHSDLMILLARTTPLAEVKKKSEGMSIFIVDLHE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGHGMTVQPILN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFRYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   YA+ R V G  +     ++  IA   +++ AA+ + F  A  FD
Sbjct: 251 AECIGDGYWFVDKVTEYAKERIVFGRPIGQNQGVQFPIARSFINVEAASLMRFEAARRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 AHQPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|226362528|ref|YP_002780306.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226241013|dbj|BAH51361.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 390

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 134/371 (36%), Gaps = 30/371 (8%)

Query: 92  ERWDKVEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           +R  +++   A+   L R     GL      ++         H+I               
Sbjct: 31  QRVSELDDANAFDLELYRALGEAGLIGLD-AQADGTTGADPRHQIIVLEELAAGPTSMAV 89

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +        ++    + +                   AP+   S  +   LTE  GGTD
Sbjct: 90  CLVVQYMGVGLLTEYGSDQQRSSVL-------------APLLDGSERVAFALTEPDGGTD 136

Query: 211 IAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQV--EGRVGCFLVPRLLEDGS 266
           +A  + ++ ++   G + L+G K ++S P      I+LA+           +   +    
Sbjct: 137 VARVMRTRAKQSDGGRWVLNGAKTWISGPQHARNLIVLARTSTPESSPIDGITMFVVPTD 196

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+  + L +     S  T E+ F N       +LG ++     V        L++A  
Sbjct: 197 APGITVREL-DTFAIHSLDTCEVTFDNVEIDASAVLGHVDQGFRQVLGTLNGERLNAAAA 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++   R +L  A+ Y R+R V G  +      +  + D A+ I +A AL  + A +    
Sbjct: 256 ALGIARGALEAAVDYGRQRQVFGRPVGSFQAGQHRLVDGAIAIESARALMLQAAEATATG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +        A I++ + K      A AV    M  +GGSG+ +E  + R +R++   +  
Sbjct: 316 Q-------RADILSAMAKVAASDAAVAVTDAGMRLMGGSGFSKEYPMERLFRDARLYTFA 368

Query: 444 LGSGNAMVLDV 454
             +   +   +
Sbjct: 369 PLTNEMLRNHI 379


>gi|73537751|ref|YP_298118.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72121088|gb|AAZ63274.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 383

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 114/357 (31%), Gaps = 26/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            +L+R+    G        ++                   A L   ++   +  +  ++A
Sbjct: 39  RSLMRQMGEMGFIGPELPEAYGGQGMGCLAAGVIHEAVARADLSMSYVNLLASLNGQILA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P V + W  ++   E                 + LTE RGG+D  ++  + +++ D
Sbjct: 99  QHALPEVGRPWLQRLTRGE-------------ALFAIALTEPRGGSDAGSLRLRMERVGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                       ++  +DA ++ A+      G   +  +L      G+   R  +  G R
Sbjct: 146 SYVLNGEKTSISAADQADAAVVFARTGSVEDGARGISAVLVPMDLPGVTRNRF-DCHGQR 204

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +     + F N       LLG        V            +  ++  + +L E   Y 
Sbjct: 205 AIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDFSRALIGLQVLAVAQAALDETWEYV 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L     +   +AD    + AA  L  +     D     + EAA  +  AP 
Sbjct: 265 AERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQTLWLKDHGLPHTSEAAMCKWWAP- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 K+A  V+ + +   G  GY     + +  R+     I  G+   M   +  
Sbjct: 324 ------KLAYDVVHQCLLSFGHGGYDRG-VMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|269128217|ref|YP_003301587.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313175|gb|ACY99549.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 402

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 121/371 (32%), Gaps = 28/371 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    L   +   GL                A              EA +  +P   +
Sbjct: 47  CPPIIEELKAEARKRGLWNLFLPDISGLSNVDYATLAEITGRSFHLAPEAVNCAAPDTGN 106

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQ 217
             ++ +  T    + W               P+ +  +     +TE     +D   IT+ 
Sbjct: 107 MEVLHMFGTEEQKERWL-------------RPLLEGQIRSAFAMTEPDVASSDATNITTS 153

Query: 218 GQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQ 273
             +  D  Y ++G KWF+S    D    FI++ + +           +L      G+   
Sbjct: 154 IVRDGDE-YVINGRKWFISGSADDRCKIFIVMGKTDPDGPVHRQQSMVLVPRDTPGVRVV 212

Query: 274 RLKNKIGNRSNA-TVELEFSNTFGFLLGDL-NVSTGPVEDMKILI--YLDSAIMSVSGMR 329
           R     G R      E+ F N    +   L N   G +     L    +   + ++    
Sbjct: 213 RDLTIFGYRDQHGHPEVVFENVRVPVSNLLANEGDGFMIAQARLGPGRIHHCMRALGMAE 272

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +L      A  R   G  L +Q V+++ IA+  + I  A  L+ + A   D+  S+   
Sbjct: 273 RALELMCQRAVSRVAFGKTLAEQGVVQQQIAESRMAIEQARLLTLKAAWMIDKYGSKG-- 330

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              AR      K    ++A  VI  A++  GG+G   +  +A  Y  + A  I  G    
Sbjct: 331 ---ARTEIAAIKVVAPRVACEVIDRAIQVHGGAGVSGDTPLAGMYAWARAMRIFDGPDEV 387

Query: 450 MVLDVLNLLEK 460
            +  V     K
Sbjct: 388 HIRTVARQELK 398


>gi|160899110|ref|YP_001564692.1| acyl-CoA dehydrogenase domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364694|gb|ABX36307.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1]
          Length = 387

 Score =  169 bits (429), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 114/362 (31%), Gaps = 39/362 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQL 146
           R D     P  H   +     G         F          I  A L +       A L
Sbjct: 30  RKDHEGGFP--HDFHKALADAGWLGIAMPEEFGGAGL----GISEAALMMHTISATGAGL 83

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  ++     V +  T    + W P             P+   +     G+TE  
Sbjct: 84  SGASAVHMNIFGLHPVVVFGTDEQKRRWLP-------------PLIAGTDKACFGVTEPN 130

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLE 263
            G +   + ++  +  D         +  ++ +++  ++L + +      G   +     
Sbjct: 131 AGLNTLKLQTRAVRDGDVYVVHGQKVFISTAQVANKILLLVRTKPVEECKGTEGLSLFYT 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDS 320
           D     +  + + +K+G +   T +L            +G+       +        +  
Sbjct: 191 DLDRERIEVREI-DKLGRKCVDTNQLFIDGLRIPAEDRIGEEGKGFSYILHGLNPERILI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +V   R +LA A  YA+ R V    +     ++  +A   + + AA  +  + A  +
Sbjct: 250 AAEAVGLGRAALARATQYAKERVVFDRPIGQNQGIQHPLAQAWMGLEAAHLMVQKAAFLY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D       EA  A+ +A                 A+   GG GY +E  + R+ RES   
Sbjct: 310 DRGLPCGAEANAAKYLAAEAC-------AKACETAIFTHGGMGYAKEYHVERYMRESWIP 362

Query: 441 SI 442
            +
Sbjct: 363 RL 364


>gi|260467279|ref|ZP_05813454.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028969|gb|EEW30270.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 382

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 115/349 (32%), Gaps = 33/349 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +      G    +   ++       +           A    G      + +   + 
Sbjct: 34  REFVEALTEAGWLSILIPEAYGGSGLPLSAAAAVLEEIQRAGCN-GGACHAQMYTMGTLV 92

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + + PK+ + E                  G+TE   GTD  A+ +  +    
Sbjct: 93  RHGSEAQKQRYLPKVAAGELR------------LQAFGVTEPTSGTDTGALKTTARLDGY 140

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP---NGLCYQRLK 276
                    W   +  SD  ++LA+     +G      +  L+ D       GL  + ++
Sbjct: 141 HFVVKGQKIWTSRAEHSDLMLLLARTTPLKDGMKKTDGLSVLIVDMREAVGKGLTIRPIR 200

Query: 277 NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             + N +  T E+ F +       L+G+       +        +  A   V   +  + 
Sbjct: 201 TMM-NHA--TTEVFFDDLRVPAENLIGEEGKGFRYILSGMNAERILIAAECVGDAKWFIE 257

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
           ++  YA+ RHV G  +     ++  IA    ++ AA  +     N ++  K+   EA  A
Sbjct: 258 KSSVYAKERHVFGRAIGQNQGVQFPIARAYANMRAAELMVREALNLYEAGKNPGAEANMA 317

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +++A          +       ++  GG G+ EE  + R +RE+    +
Sbjct: 318 KMLAA-------DASNEAANVCIQTHGGFGFAEEYDVERKFRETRLYQV 359


>gi|258576001|ref|XP_002542182.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902448|gb|EEP76849.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 524

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 91/390 (23%), Positives = 151/390 (38%), Gaps = 72/390 (18%)

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQK-------ISDGI---------YCLSGHKWFLSSP 238
           +   G  +TE++GG+D+    +  +K        SDG+         + + G KWF S+ 
Sbjct: 104 AWTSGQWMTERKGGSDVRGTETVARKLSAAEKSESDGVDANSLPLGPWRIDGFKWFSSAT 163

Query: 239 MSDAFIMLAQV--EGRVGCFLVP-RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELE 290
            ++  I+LA+   +G V  F  P R    G       NG+  QRLKNK+G +   T ELE
Sbjct: 164 DANMTILLAKTSQDGAVSAFYAPLRRRVKGGNGETELNGIRIQRLKNKLGTKPVPTAELE 223

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                 +L+G        +  +  +  L +AI            A  YA+ R V   +L+
Sbjct: 224 LKGMRAYLIGKEGQGVKEISTLLNITRLQNAI------------AAAYAKVRMVRNTLLM 271

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSF------DEA-----------KSRSEEAAYA 393
           D P   R +A   +  AA   L+F LA         D             +++ E  A  
Sbjct: 272 DMPAHVRKLAQDYVKYAANMHLTFLLAALLGLSEGQDSGPTPAARANIVPQTQREAQALL 331

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE----RSIARHYRESPANSILLGSGNA 449
           R++ P+ K      A   +   ME +GG GY+E      +IAR +R+S   SI  G+ + 
Sbjct: 332 RLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDSCVLSIWEGTTDI 391

Query: 450 MVLDVLNLLE--KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC------------- 494
           M  D++ + +  +G+     L + +   LG++  K        +                
Sbjct: 392 MADDLIRVAKGREGSECLAVLGAWVSNVLGAADSKGFGNEARQLRRVWEHWLTGIKTKEK 451

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMND 524
           ++ K   R     +        L      D
Sbjct: 452 EQLKWEGRSYLRDLEHVVCGCLLILDASRD 481


>gi|220911416|ref|YP_002486725.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
 gi|219858294|gb|ACL38636.1| acyl-CoA dehydrogenase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 396

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 118/347 (34%), Gaps = 18/347 (5%)

Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAP-- 176
           W+R   P         R      +    A       V  A   V+L     +H +     
Sbjct: 53  WNREEFPRDVVAGMGARGLGELQLDGSSALFKGLMYVELARADVSLSALAGIHNELIVGT 112

Query: 177 --KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKW 233
             ++ S E        ++  +      LTE   G+DI+  + +  ++           +W
Sbjct: 113 IHELGSDEQKRRWLPGLRTFAQLGAFALTEPAHGSDISRGLETTARRDGGEWVLNGTKRW 172

Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
             +  ++D  ++ A+             L +    G    R+++KIG R     ++   +
Sbjct: 173 IGNGTIADVALVWARDTADGHLKC---FLVETDRPGYSAARIEHKIGLRIMQNADIRLED 229

Query: 294 TFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                   L  ++       +L          +      +   A  Y   R   G  L  
Sbjct: 230 VRLPEANLLPGASSFASANALLRDSRAWVGWQAAGIQFAAFDVARSYTLDRRQFGRELAG 289

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             ++++ +ADI  + AA+ AL  +LA   ++      +AA A+           ++A A 
Sbjct: 290 FQLVQQQLADILGNAAASLALMVQLARLQEDGLLEMVQAAMAKATT-------TRLARAS 342

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +A     +GG+G   + ++A+ + ++       G+     L V   +
Sbjct: 343 VAMGRSLLGGNGITSDHTMAKLFADAEILYTYEGTYEINSLLVGRAV 389


>gi|154250848|ref|YP_001411672.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154798|gb|ABS62015.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 405

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 127/362 (35%), Gaps = 36/362 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALMTTPR 169
             GL        +  +            +   +   A    +++P+  +  ++    TP 
Sbjct: 55  EQGLWAPHLPEDYGGMGIGFLKHAYMNEIMAWSPFSARLFGVVAPNSGNQKILLKYGTPE 114

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG-GTDIAAITSQGQKISDGIYCL 228
             K W               P+    +     +TE    G+D  AI ++  K  D  + +
Sbjct: 115 QKKKWLE-------------PLIAGDIESCFSMTEPDQPGSDPYAIQTRAVKDGDH-WVI 160

Query: 229 SGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQRLKNKIGNRS 283
           +GHKWF S+   +D  I++ + E + G   V     +++   +  G+   R     G+  
Sbjct: 161 NGHKWFTSNGRGADIAIVMCRTEEKDGKGGVKDKMTQIIVPMTTPGVNIVRSVPVWGHTH 220

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM-----SVSGMRVSLAEAIHY 338
               E+++ N    L   L  +    +  +    L    +     S+  M  +       
Sbjct: 221 GDHCEIKYENVRVPLENQLGRTGTGHQAAQ--DRLGEGRVFHCMNSIGQMWRAFDMMCKR 278

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R V GG L  +  ++  IAD  +DI AA  ++   A+  +E  +   + +  +I  P
Sbjct: 279 AISRDVHGGKLESKQFIQGFIADSYMDIQAARLMTIHCAHQMEEGSAARVDISAIKIFVP 338

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                       V+  A++  G  G   +  +A  ++ +    +  G      + +   +
Sbjct: 339 AAFE-------RVVDRAIQVHGALGVSGDTPLAGMFQGARTLRLADGPDEVHRIVIAKSV 391

Query: 459 EK 460
            K
Sbjct: 392 LK 393


>gi|284991030|ref|YP_003409584.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284064275|gb|ADB75213.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 648

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 129/367 (35%), Gaps = 50/367 (13%)

Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
           G         +  +   Q +  +A  +     + +        S+     +    +    
Sbjct: 93  GALGMKIPEGYGGLGLSQVYYNKALAMAGTWHSSISTLLSAHQSIGLPEPLRHFGSEEQK 152

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230
           + W PK+                       LTE   G+D A +++      DG  Y ++G
Sbjct: 153 RQWLPKL--------------AKDHISAFLLTEPDVGSDPARMSTTAVPTEDGTGYRING 198

Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
            K W  +  ++D  +++A V    G    +   L      G+  +   + +G +      
Sbjct: 199 TKLWATNGAIADVVVIMAVVPRSHGHRGGITAFLCPYDRPGITVEHRNDFMGLKGIENSV 258

Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-----VSGMRVSLAEAIHYARRR 342
             F + F     D +V  G  E ++I L  L++  +S     +S ++ SL  A  ++  R
Sbjct: 259 TRFDDVFVP---DEDVIGGEGEGLRIALTTLNTGRLSLPTFCLSMVKYSLKIAREWSAER 315

Query: 343 HVSGGILIDQPVMKRAIADI---ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
              G  + +   + + +A +   A  + A   +S RLA+  DE      EAA A      
Sbjct: 316 KQWGQPIGEHDPIAQKLAWLAGTAFGLEAMLDVSSRLAD--DERNDIRIEAALA------ 367

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNA 449
            K +  ++    + E ++  GG GY   E             +  R+   N I  GS   
Sbjct: 368 -KLYGSELGWTAVDEMVQVRGGRGYETAESLAQRGEKPVPAEQMLRDMRINRIFEGSTEI 426

Query: 450 MVLDVLN 456
           M L +  
Sbjct: 427 MHLLIAR 433


>gi|225685187|gb|EEH23471.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03]
          Length = 388

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 74/466 (15%), Positives = 136/466 (29%), Gaps = 105/466 (22%)

Query: 2   TLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL 61
           +LR + R ++ N   + + +    N        N ++ D L           +       
Sbjct: 12  SLRAVKRPISGNLGRRYAHATAGFNWEDPLAASNLFTEDEL----------AIQDTARQY 61

Query: 62  GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121
            +  L+    E  R  NY+                         ++R     GL  +  +
Sbjct: 62  CQEQLAPRILEAYRNENYD-----------------------KKIIREMGELGLLGATIE 98

Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181
                 V   A  +    +  +       +   S    + +    TP     + P++   
Sbjct: 99  GYGCAGVSTVASGLITKEVERIDSGYRSGMSVQSSLIMTGIYEFGTPEQKDKYLPEL--- 155

Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHK-WFLSSP 238
                      K       GLTE   G+D  ++ +  +      G Y +SG K W  +SP
Sbjct: 156 ----------AKGKKLGCFGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSP 205

Query: 239 MSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTF 295
           +SD F++ A+    G++  F++ R   D  P G L    +KNK   R++ T  ++  +  
Sbjct: 206 ISDYFLVWAKLETTGKIKGFIIER---DQCPPGTLETPAIKNKTALRASITGMIQMDSCP 262

Query: 296 GFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILIDQ 352
                                   L  A  ++  +   +  A  YA  R    G  L   
Sbjct: 263 VPEANMFPDVEGLKGPFTCLNSARLGIAFGTMGALEDCIDRARSYALERKQFKGNPLAKY 322

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            ++++ +AD                           +AA                     
Sbjct: 323 QLVQKKLADATT------------------------DAAL-------------------- 338

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               E  GG+   +E  I RH           G  +   L +   +
Sbjct: 339 ---QEIFGGNAASDEYHIGRHVANLFVTQTYEGQSDIHSLIIGRAI 381


>gi|159897488|ref|YP_001543735.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890527|gb|ABX03607.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 363

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 123/345 (35%), Gaps = 30/345 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL-MAQLEAGHLMSPSVTSASMVA 163
            +L +    GL  S     +       A     A   L    L +   +S   + A  + 
Sbjct: 41  DILSKGWELGLVGSSIPEQYGGFGEFSAVTGALALEELAWGDLASALALSAPASFAFAIL 100

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    +   P+ FS E           + V     L E R   +   + +   +  D
Sbjct: 101 AAGTEAQREALLPQ-FSEE-----------SFVNATSALIEPRLQFNPRKLQTTATRDGD 148

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           G Y L+G K ++  +  ++ F++ A  +G+   F+VP         GL     +  +G R
Sbjct: 149 G-YVLNGVKSYVPLANSAEHFLIYAAEDGQTQAFIVPT-----KTTGLTVGEREKLMGVR 202

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340
           +     +   N        L      ++  ++     +  A ++V   R +   A+ YAR
Sbjct: 203 ALEVARITLDNVKVAADAKLG-GEAGIDFGRLYARSQVGLAALAVGVARGAYEYALDYAR 261

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  +  +  +   +A++ ++I  A  + +  A   D  +  + +A  A+  A  T
Sbjct: 262 NRQTFGEAIGQRQSIAFMLAEMLVEIDGARLMVWEAAWKLDNNQEVTRDALMAKHNADKT 321

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               C  A       ++ +GG GYI E  +    R +   S   G
Sbjct: 322 VLMVCDRA-------LQILGGHGYIREFPVELWLRNARGFSTFDG 359


>gi|302527266|ref|ZP_07279608.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
 gi|302436161|gb|EFL07977.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
          Length = 395

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 17/290 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238
            + E       P+ +   A    LTE   G+D+ A+ +      DG + +SG K F S+ 
Sbjct: 116 ATDEQRERYLLPVVRGERACCFSLTETNAGSDVRAMRTVATPDGDG-WRISGRKVFSSAG 174

Query: 239 -MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFG 296
            ++D  +++A++ G    +     L D    G      +  + G       ++   + + 
Sbjct: 175 PIADFSVLVARMAGEGESY--SAFLVDLDSPGCTVADGEVPMSGQH--IESDIILDDCYV 230

Query: 297 ---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
               LLG +               L      +   R +L   I +AR R V GG L    
Sbjct: 231 GPQQLLGRVGDGLRIGLGRVTTNRLLHCPTVLGHARRALELTIEFARTRQVFGGPLAALQ 290

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  IAD+A    A+ A+++   +  D   + S EA          K +  + A  +  
Sbjct: 291 SIQHKIADMAASYYASRAMTYDALSELDSGSTPSTEAFM-------CKLFVAENAFRIAD 343

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           EA++  G +G +    +   +R      +L GS       +   L +   
Sbjct: 344 EAVQIHGKAGLVRGAEVEWLFRRLRMFRVLTGSSEIQKNGIAKALLQSGA 393


>gi|302418038|ref|XP_003006850.1| acyl-CoA dehydrogenase fadE12 [Verticillium albo-atrum VaMs.102]
 gi|261354452|gb|EEY16880.1| acyl-CoA dehydrogenase fadE12 [Verticillium albo-atrum VaMs.102]
          Length = 438

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 133/364 (36%), Gaps = 36/364 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P            G        S           I  A + +    E+G  
Sbjct: 75  QERDQTETDP--KEFHAALAKGGWLGIALPESLGGSGL----GISEATMMMQTISESGAG 128

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   + +  +   P I S ++              +  G+TE 
Sbjct: 129 MAGAQSIHANVYATQPLARFGSQQQLETAIPNIVSGKWR-------------VCFGVTEP 175

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLE 263
             G D  ++T+   ++ DG Y +SG K +++ + ++   I+LA+   +    F +     
Sbjct: 176 NAGLDTKSLTTTANRLDDGSYSVSGQKIWITCAQVASKMILLARTGPQALSLFSI---DI 232

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D    GL  +R+K K+G R+    E+ F N       L+G+       +           
Sbjct: 233 DREAKGLDMRRIK-KMGGRAVDANEVFFDNYQIPADALIGEEGNGFKMILHGMNAERCLL 291

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  ++     +L  A  YAR R V G  +     +   +AD  + + AA   ++  A  +
Sbjct: 292 AGEALGLGYAALTRAATYARERVVFGRPIGMNQGVAHPLADAYMQLEAAKLATYHAARLY 351

Query: 381 DEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
           D +     S +A    I A   KY   + A A    A+   GG GY  E  + R  RE  
Sbjct: 352 DASSKTDSSIQAHELGIAANSAKYLAAEAAFAACERAVLAHGGMGYAMEYDVERWLRECM 411

Query: 439 ANSI 442
              I
Sbjct: 412 VPRI 415


>gi|149917900|ref|ZP_01906394.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Plesiocystis pacifica SIR-1]
 gi|149821166|gb|EDM80570.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Plesiocystis pacifica SIR-1]
          Length = 406

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 142/376 (37%), Gaps = 35/376 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK-QAHKIRAARLYLMAQLEA-GHL 151
            D+ + H A    + R    GL   +   +F        A  I  AR +L  +  A    
Sbjct: 54  VDESDEHGATRTYVARLAEAGLLKLMVPGAFGGEYEAVSATAICLARQWLARESGALDTA 113

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                  +  V L  TP +     PK+ + E+                  LTE   G+D+
Sbjct: 114 FVMQGLGSFPVVLAGTPELQGALMPKVATGEH-------------ICAFALTEPEAGSDV 160

Query: 212 AAITSQGQKISD--GIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR---LLEDG 265
           + + +  +   +  G   L GHK F+S+  ++ ++++ A+ EG  G    PR       G
Sbjct: 161 SGMQTVAEADPNAPGGVILRGHKTFISNAGVATSYVVFAR-EGEAGEDGKPRYGAFWVSG 219

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAI 322
           S  GL  + ++       +    + F          L  V  G    +  L    +    
Sbjct: 220 SAEGLSVEAMQV---IAPHPIGTVHFDGVRVPAAHRLGEVGEGLRIALGNLDQFRMTVGA 276

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     ++AE++ + + R   G  L  Q  ++ A+AD+A D  AA  + +R A + D 
Sbjct: 277 AALGLADRAIAESVRHLKTRVQFGRPLAKQQGLRFALADVAADHVAAQLMVYRAAAARDR 336

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             +  ++ A A++MA        + A   I   ++  GG G +      R YRE  A  I
Sbjct: 337 GDATPDQPAMAKMMA-------TEHAQRAIDRCVQNFGGRGVLVGEVPERLYREIRALRI 389

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L +   +
Sbjct: 390 YEGTTEVQKLVIARAM 405


>gi|296159731|ref|ZP_06842553.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gi|295889945|gb|EFG69741.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 387

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 116/361 (32%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G   ++  + F                   A       
Sbjct: 29  RKIDEARGYPE--AFVDALTKAGWLAALIPQDFGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +    + + PKI   +                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMGTLLRHGSEEQKQKYLPKIACGDLR------------LQSMGVTEPSTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +  ++  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TKIKTTAERRGDRYVINGQKVWISRVQHSDLMILLARTTPLADVKKKSEGMSIFIVDLHE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGHGMTVQPILN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFRYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   YA+ R V G  +     ++  IA   +++ AA+ + F  A  FD
Sbjct: 251 AECIGDGYWFVDKVTEYAKERIVFGRPIGQNQGVQFPIARSFINVEAASLMRFEAARRFD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 AHQPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I 442
           +
Sbjct: 364 V 364


>gi|29828848|ref|NP_823482.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29605953|dbj|BAC70017.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
          Length = 375

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/317 (19%), Positives = 105/317 (33%), Gaps = 28/317 (8%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           EA   ++     A  V    T    + W P++                S      L+E  
Sbjct: 75  EAETALALQGLGAYPVHGYGTRAQRECWLPRV-------------SDGSAVAAFALSEPG 121

Query: 207 GGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D AA++ + +    DG        W  ++P +D + + A+     G   V   L   
Sbjct: 122 AGSDAAALSLKAEPDGPDGWRLTGEKCWISNAPEADFYTVFARTTPGAGARGVTAFLVPA 181

Query: 266 SPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              GL    L     + IG  +   V +   +  G       V+   +     L      
Sbjct: 182 DRPGLTGTPLDMLSPHPIGALAFDAVPVTADDVLGEPDHGFRVAMHTL----NLFRPSVG 237

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L   + +   R   GG L D   +   +A++AL   AA  + +  A ++D
Sbjct: 238 AFAVGMAQAALDATLAHTSGRDAFGGKLRDLQTVAHQVAEMALRTEAARLMVYAAAAAYD 297

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           EA             A + K    + A  V+  A++  G         +   YRE  A  
Sbjct: 298 EAAPD------VPRRAAMAKLLATETAQYVVDAAVQLHGARALRRGHLLEHLYREVRAPR 351

Query: 442 ILLGSGNAMVLDVLNLL 458
           I  G+       +   L
Sbjct: 352 IYEGASEVQRAVIAKEL 368


>gi|111224271|ref|YP_715065.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111151803|emb|CAJ63523.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 404

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/362 (20%), Positives = 132/362 (36%), Gaps = 41/362 (11%)

Query: 114 GLHCSIWDRSFEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
           GL      + +  +       A    AA   L   L A +L +P   +  M+ ++ T   
Sbjct: 56  GLFAPHVSQEYGGLGLGMTARAPVFEAAGYSLFGPL-ALNLSAPDEGNMHMLEIIATDEQ 114

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCL 228
            + +   + S E             V     +TE     G+D AA+++   ++ DG + +
Sbjct: 115 KERYLRPLASGE-------------VRSFFAMTEPAPGAGSDPAALSTTAVRVDDG-WRI 160

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKN-----KIGN 281
            GHKWF +     A+ I  A+  G VG        L D    GL   R  +      IG 
Sbjct: 161 DGHKWFSTGADGAAYAICFARTSGTVGTVGGATMFLVDADNPGLKVVRHIDTLDQAMIGG 220

Query: 282 RSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                 E+ F N       +LG+L+      +       +   +  +   R +   AI  
Sbjct: 221 H----CEVIFDNCVVPDSAILGELDQGFAYAQVRLGPARMTHCMRWLGIARRAQDIAIDR 276

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
              R + G  L +  + ++ IAD  +DIAA+ +L  +     D+ +        A     
Sbjct: 277 IAERRLFGSKLTELGMAQQMIADSEIDIAASRSLILQACWELDQGQ-------RAAQSTA 329

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +TK +  +    V+  A++  G +G   E  + R+  E  A  I  G+       +    
Sbjct: 330 MTKTFVAEAVWRVVDRAIQLCGAAGVSGELLLGRYLNEVRAFRIYDGASETHRWALARRA 389

Query: 459 EK 460
            K
Sbjct: 390 VK 391


>gi|169620040|ref|XP_001803432.1| hypothetical protein SNOG_13221 [Phaeosphaeria nodorum SN15]
 gi|160703953|gb|EAT79548.2| hypothetical protein SNOG_13221 [Phaeosphaeria nodorum SN15]
          Length = 400

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/371 (21%), Positives = 137/371 (36%), Gaps = 43/371 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+    P           DG        +F          I  A + +    E+G  
Sbjct: 30  QERDQTGTDP--KDFHAALAKDGWLGIALPEAFGGSGL----GISEATMMMQTIAESGAG 83

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   T    ++  PKI S E+                 G+TE 
Sbjct: 84  MAGAQAIHANVYATQPLAKYGTKEQLQNTIPKIISGEFR-------------TCFGVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---------VGC 255
             G D   +++  +K  DG Y ++G K +++ + ++D  I+LA+ + R         +  
Sbjct: 131 NSGLDTLRLSTTARKQDDGTYSITGQKIWITCAQVADRMILLARTKAREEAEKPSKALSM 190

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312
           F +P    D S  GL   R+  K+G R     E+ F N   +   L+G        +   
Sbjct: 191 FCIP---IDKSAPGLDM-RMIKKMGGRGVDANEVFFDNYKISADCLIGKEGDGFKIILHG 246

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                   A  ++     +LA+A  YAR R V    +     +   +AD  + + AA   
Sbjct: 247 MNAERCLLAGEALGLGYAALAKASAYARDRKVFERPIGMNQGIAHPLADAYMRLEAAKLA 306

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           ++  A  +D +K+       A  +A    KY   + A      A+   GG GY +E  + 
Sbjct: 307 TYHAAKLYDSSKTDQTIRQDAIGVAANSAKYLAAEAAFTACERAVLAHGGMGYAQEYDVE 366

Query: 432 RHYRESPANSI 442
           R +RE     I
Sbjct: 367 RWFRECLVPRI 377


>gi|119961860|ref|YP_946557.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119948719|gb|ABM07630.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 435

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 138/431 (32%), Gaps = 54/431 (12%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQEL-ARMANYNTPQLHAYGPGGERWDKVEFHPAWHA 105
           +A+ P+    + E L          EL A +A+   P        G  W+K EF    H 
Sbjct: 33  VADLPTADFFDFESLLSVQEQRKLNELRAFLASEIAPH------AGHWWEKAEFPE--HI 84

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMV 162
           L + +           R   P  R   H      +  M +++   A   M         +
Sbjct: 85  LPKLAA---------LRLSAPAQRGYTHLFAGLVIAEMTRVDTSIATFFMVHHDLFVESL 135

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKI 221
               +      +                           LTE   G+D+A  + +  +++
Sbjct: 136 YDFGSDVQQDRYLDD-------------ASNLRTTGAFALTEPNHGSDVAGGMETTARRV 182

Query: 222 -------SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
                   D        +W  +    D  ++ A+ E       V   + D S  G+   R
Sbjct: 183 ERADSDGGDYWVINGAKRWIGNGTFCDYMLVWAKDEKDGA---VRAFIVDASLPGITRSR 239

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSL 332
           ++NKI  R+    ++ F++            +       +     +  A  +V     + 
Sbjct: 240 IENKIALRTVQNADIVFADVEVAEADRFAGISSFADTNHLLRGSRIMVAWQAVGQQLAAF 299

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-----DEAKSRS 387
             A  YA  R   G  L    ++++ + D+  +  A+  +  R+A        D    R 
Sbjct: 300 DVARQYAVERMQFGKPLAKFQLIQQHLVDMLGNAVASMGMMVRIAQLQEDIFTDAQGVRH 359

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             A  A+    + K +C       +A     +GG+G + +  IA+ + ++ A     GS 
Sbjct: 360 GGADMAQ--VALAKAYCSARMRETVALGRSILGGNGIVTDYRIAKIFADAEAIYTYEGSY 417

Query: 448 NAMVLDVLNLL 458
               L V   +
Sbjct: 418 EINSLIVGRAV 428


>gi|258424336|ref|ZP_05687217.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9635]
 gi|257845602|gb|EEV69635.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9635]
          Length = 418

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVNIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|262376571|ref|ZP_06069800.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
 gi|262308710|gb|EEY89844.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145]
          Length = 431

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 128/356 (35%), Gaps = 33/356 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK--IRAARLYLMAQL 146
           P     D+ E  P  H L + S   GL+      +   V  +Q     I  A+       
Sbjct: 100 PLAHDADQHELFP--HELWQYSTDLGLNFYALPEALGGVASEQNIVSNILIAQHLAQGDF 157

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
                +  + +  + +    + ++  ++              A  +   +     + E+ 
Sbjct: 158 SLTAGLLSTFSFINAITRWGSEQIQSEYL------------GAFAENPELKATFAVQEET 205

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
              +   + ++                 L    +D +++ A ++GR   F+V R      
Sbjct: 206 AAFNPEQLRTKAVAHQGHYLIRGQKTLVLLGESADLYLVSADLDGRAEVFVVQRDST--- 262

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
                  +    +G ++  TV L+F NT  + LGD +       D+  L++     M+V 
Sbjct: 263 ----ITAKKSPAMGLKATETVTLKFENTPAYRLGDEDFDYRAFVDLGNLMW---CAMAVG 315

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                    + YA  R   G  +  +  +   IAD+A++I A   L    A+  +  ++ 
Sbjct: 316 TCEAVKKYCVQYANERIAFGEPISHRQSVAFMIADMAIEIDAMQMLILNAASLAESGQAF 375

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
             E       A I +  C + +  +  + ++ +GG G+ +E  + R YR+  A +I
Sbjct: 376 HRE-------AYIARLLCAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAI 424


>gi|41406909|ref|NP_959745.1| FadE10 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395259|gb|AAS03128.1| FadE10 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 642

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/430 (18%), Positives = 145/430 (33%), Gaps = 54/430 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
             +R     G         F  +   Q    RA  +        G L+S   S+     +
Sbjct: 85  EYVRGLADLGCFGMKIPSEFGGLNMSQVAYNRALMMISSVHPSLGALLSAHQSIGVPEPL 144

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  TP   + + P+  +                     LTE   G+D A + S    + 
Sbjct: 145 KLAGTPEQKRKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPVD 190

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 191 DGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFM 250

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLA 333
           G R                    N+     + +KI L  L++  +S+        + +L 
Sbjct: 251 GLRGIENGVTRLHRVRVPS---ENLVGREGDGLKIALTTLNAGRLSIPASATGSAKWALK 307

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  L +   + R ++ IA  + A  A+    A   DE ++        
Sbjct: 308 IAREWSGERVQWGKPLAEHEAVARKLSFIAATVYALDAVLELSAQMADEGRNDIR----- 362

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSIL 443
            I A + K W  +MA  +  E M+  GG GY   E           + +  R+   N I 
Sbjct: 363 -IEAALAKLWSSEMACVIADEVMQIRGGRGYETAESLAARGERAVPVEQVLRDLRINRIF 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+   M L +           E + + L    G   K    +   + +        A++
Sbjct: 422 EGASEIMRLLIAR---------EAVDAHLAAA-GDLAKPDAGLREKAAAAVGASGFYAKW 471

Query: 504 LTEKIALASS 513
           L + +     
Sbjct: 472 LPQLVFGEGQ 481


>gi|254250507|ref|ZP_04943826.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124879641|gb|EAY66997.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 614

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/522 (17%), Positives = 178/522 (34%), Gaps = 85/522 (16%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D   +A    + +     ++ L E      A +L R    A+     L   G    
Sbjct: 18  LFEADKRFLAEHGLYGTHDRASIDALLERA-RDFALDLGRSYQQADVEGCTLLDDG---- 72

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGH 150
              +V     +HAL  R   +      W  +      +    +      +++ A      
Sbjct: 73  ---QVRIPSHFHALWARFRDE------WSNTLFGTAHELPPIVTQMIYEMFMGANPSFMT 123

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +  ++ +  TP                    AP++          TE + GTD
Sbjct: 124 YGGFTRPAVKLLQMHGTPHQKA--------------LIAPLEAYRWDACFCATEPQAGTD 169

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           + A+  +   +   IY + G K ++S+ M +      + +L +++        + C +VP
Sbjct: 170 LTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLYFVLGRIDTASPDSFSLSCLVVP 229

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVE 310
           R   D       PN +    L  K+G +  A   L F +   T G+LLG   NV    + 
Sbjct: 230 RFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFGSNGTTKGWLLGGRRNVGLLQLM 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKR 357
            +     + + +  V     +   A+ YA RR   G  +             ++   ++R
Sbjct: 290 PLMNQARMSTGMFGVGVASSAYLHAVEYAGRRLQ-GRPIERASNTHAARVAIVEHADVQR 348

Query: 358 AIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWCCK 406
            + D+   +     L  +LA      +  EA   ++ A   R       + PI K +   
Sbjct: 349 MLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFISD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTN 463
            A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + + 
Sbjct: 409 QAWRICETAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRHSR 468

Query: 464 LFEQLFSTLEQDLG----SSGKKVITILRDSISLCKEDKGLA 501
           L +     L+  L     +     +  L D++    +    A
Sbjct: 469 LIQYYRDELDAFLAQQHHAGTHAELRPLFDALRAGADRIAAA 510


>gi|297622309|ref|YP_003703743.1| acyl-CoA dehydrogenase domain-containing protein [Truepera
           radiovictrix DSM 17093]
 gi|297163489|gb|ADI13200.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM
           17093]
          Length = 401

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 131/379 (34%), Gaps = 33/379 (8%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQLEAG 149
           G+ W +  F P    L R     GL      +++        A+ +    L         
Sbjct: 52  GDWWQREHFPP---HLPRALGELGLLGVSLPKAYGGQGASHTAYGLVCQALEYGDSGLRS 108

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L   S      +    +  + K W P + + E                   LTE  GG+
Sbjct: 109 FLSVQSSLVMYPLYKYASETLQKRWLPPLATGE-------------AVGCFALTEPHGGS 155

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           D + +    +++  G Y LSGHK + ++  ++D  I+ A+ EG            +    
Sbjct: 156 DPSRMKVTARRVG-GEYVLSGHKRWSTNGLIADLAIVWAKEEGSDQVVG---FAVETRSE 211

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--GPVEDMKILIYLDSAIMSVS 326
           G   + +  +   R++ + E+            L V    GP+  +        A  ++ 
Sbjct: 212 GFEARGIPGRASLRASVSSEVFLHEVRVPAENKLAVEGLRGPLSCL-NAARFGIAFGALG 270

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                  EA  Y   R + G  L  + +++  +AD+  ++   + L++ L    +  +  
Sbjct: 271 AGYACFDEARRYVAERELFGESLAHKQLVQAGLADMLAELTKGSLLAYHLGRLKEAGQDT 330

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
               + A+           + A  V   A + +GG+G + E +  RH     + +   G+
Sbjct: 331 PARVSLAKRD-------NVRAAQRVARTARDLLGGNGILTEHASIRHLLNLESVATYEGT 383

Query: 447 GNAMVLDVLNLLEKGTNLF 465
                L +   +  G N F
Sbjct: 384 DAVHTLVLGREIT-GHNAF 401


>gi|288961099|ref|YP_003451438.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913407|dbj|BAI74894.1| acyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 398

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 138/417 (33%), Gaps = 60/417 (14%)

Query: 81  TPQLHAYGPGGE-----RWDKVEFHPA-WHA-----------LLRRSIHDGLHCSIWDRS 123
            P L  Y              VE  PA W             L  +    GL      + 
Sbjct: 6   PPDLEDYRRRVRAFVETEILPVEADPANWDEHENIAEAPLEVLRAKVKAAGLWALGLPKE 65

Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLM----SPSVTSASMVALMTTPRVHKDWAPKIF 179
            +           AA    M +   G +     +P   +  ++  + T    + W     
Sbjct: 66  RDGQGLP--MVGLAACYEEMNRSIFGPVCFNAAAPDDGNMRVLNAVGTEAQKERWL---- 119

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237
                     P+    V     +TE    GG+D + + ++ ++  D  + +SG KWF++ 
Sbjct: 120 ---------QPIIDGKVRCAFAMTEPHPGGGSDPSMMKTRAERKGD-RWVISGRKWFITG 169

Query: 238 PMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN--RSNATVELEFSNT 294
             +   FI++A+         +   L D    G   +R    +G         EL F   
Sbjct: 170 AGAAQHFILMARTSDDP-RKGLTAFLFDRDQPGWRIERRIPIMGPEEHGGH-CELIFD-- 225

Query: 295 FGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSV-----SGMRVSLAEAIHYARRRHVSGGI 348
            G  + D NV     + +K+  I L  A ++         + SL  A  Y + R   G  
Sbjct: 226 -GLEITDDNVLMAVGDGLKVTQIRLGPARLTHCMRWTGLAKRSLEIAGAYVKERESFGST 284

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           L +   ++  + + A+ I     L+ + A++ D         ++AR    + K       
Sbjct: 285 LAEHEGVQWLLGEAAMQIEIGRLLTMKAAHALDSG-------SFARKEVSMAKVQVADTL 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
              +  A++  G  GY ++  +   YR +    ++ G+     + +        + F
Sbjct: 338 FKAVDTAIQLCGARGYSKDTVLEWIYRYARQAKLVDGASEVHKMVLSRSYLSEGDGF 394


>gi|257793955|ref|ZP_05642934.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9781]
 gi|258408638|ref|ZP_05680923.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9763]
 gi|258421229|ref|ZP_05684156.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9719]
 gi|258438977|ref|ZP_05690068.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9299]
 gi|258444212|ref|ZP_05692546.1| acyl-CoA dehydrogenase [Staphylococcus aureus A8115]
 gi|258447093|ref|ZP_05695243.1| acyl-CoA dehydrogenase [Staphylococcus aureus A6300]
 gi|258448552|ref|ZP_05696665.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus A6224]
 gi|258455786|ref|ZP_05703741.1| acyl-CoA dehydrogenase domain-containing protein [Staphylococcus
           aureus A5937]
 gi|282893389|ref|ZP_06301622.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8117]
 gi|282926341|ref|ZP_06333973.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A10102]
 gi|295405502|ref|ZP_06815312.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8819]
 gi|297244839|ref|ZP_06928719.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8796]
 gi|257787927|gb|EEV26267.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9781]
 gi|257840647|gb|EEV65106.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9763]
 gi|257842653|gb|EEV67075.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9719]
 gi|257847853|gb|EEV71849.1| acyl-CoA dehydrogenase [Staphylococcus aureus A9299]
 gi|257850471|gb|EEV74419.1| acyl-CoA dehydrogenase [Staphylococcus aureus A8115]
 gi|257854106|gb|EEV77059.1| acyl-CoA dehydrogenase [Staphylococcus aureus A6300]
 gi|257858183|gb|EEV81071.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus A6224]
 gi|257861998|gb|EEV84771.1| acyl-CoA dehydrogenase domain-containing protein [Staphylococcus
           aureus A5937]
 gi|282591670|gb|EFB96741.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A10102]
 gi|282764075|gb|EFC04202.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8117]
 gi|294969577|gb|EFG45596.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8819]
 gi|297178356|gb|EFH37603.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A8796]
          Length = 418

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKKTGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|116695633|ref|YP_841209.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]
 gi|113530132|emb|CAJ96479.1| Acyl-CoA Dehydrogenase [Ralstonia eutropha H16]
          Length = 383

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 120/388 (30%), Gaps = 38/388 (9%)

Query: 84  LHAYGPGGERWDKVEFHPAW----------HALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           L A      R+      P +           AL+R     G         +         
Sbjct: 9   LTALAEHARRFADARVAPGYLERDRTRVLDRALMREMGEMGFIAPELPEQYGGQGMGSLA 68

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                     A L   ++   +  +  ++A    P +   W  ++   E           
Sbjct: 69  AGVIHEAVARADLSLSYINLLASLNGQILAHHAQPEIAGPWLQRLTRGE----------- 117

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-- 251
               + + LTE RGG+D A++  + ++  D +Y L+G K  +S+       ++    G  
Sbjct: 118 --ALLAIALTEPRGGSDAASLRLRMERDGD-VYVLNGEKTSISAADQADAAVVFARSGTV 174

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGP 308
             G   V  LL      G+   R  +  G R+     + F N       LLG        
Sbjct: 175 ESGARGVSALLVPMDLPGITRNRF-DCHGQRAIGRGSIFFENVRVPASHLLGKEGEGFVQ 233

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V            +  ++  + +L E   Y   R   G  L     +   +AD    +  
Sbjct: 234 VMQGFDFSRALIGLQVLAVAQAALDETWAYVAERQAFGKPLSAFQGVSHPLADFETQVQG 293

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  +     D     + EAA  +  AP       ++A  V+ + +   G  GY    
Sbjct: 294 ARLLCLQTLWLKDRGLPHTAEAAMCKWWAP-------RLAYDVVHQCLLSFGHGGYDRG- 345

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            + +  R+     I  G+   M   +  
Sbjct: 346 VMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|226294836|gb|EEH50256.1| acyl-CoA dehydrogenase family protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 394

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 101/295 (34%), Gaps = 11/295 (3%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           S      +        W       E         + T +   +  TE   G D   + ++
Sbjct: 78  SGEYPHELHAALAKDGWIGIALPEELGGAGLGISEATMMLQTIAQTEPNTGLDTLKLRTE 137

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--GSPNGLC 271
             K  D         W  S+ ++   ++LA+       +     +     D      GL 
Sbjct: 138 AIKDGDSYRVSGQKIWISSAQVAKRMVLLARTTPLEQVKKPSEGLSLFFIDFDKDAPGLD 197

Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +++K K+G R+    E+ F N   T   L+G+       V           A  ++   
Sbjct: 198 LRKIK-KMGGRAVDANEVFFDNYRITADTLIGNEGDGFKIVLYGMNAERCLLAGEALGLG 256

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
            ++L +A  YA+ R V G  +     +   +AD  + + AA   ++     +D +++   
Sbjct: 257 YIALEKAAKYAKERVVFGRPIGQNQGIAHPLADAYMKLEAAKLATYHATKLYDASRTDPT 316

Query: 389 EAAYAR-IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               A  +     KY   + A      A+   GG GY +E  + R+ RE     I
Sbjct: 317 ITQKAVGVACNSAKYLAAEAAFTACERAVLAHGGMGYAQEFHVERYLRECFVPRI 371


>gi|289583572|ref|YP_003481982.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
 gi|289533070|gb|ADD07420.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC
           43099]
          Length = 406

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 123/381 (32%), Gaps = 32/381 (8%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P+L  + P G   D+V    A   + + S   G +                    +A  +
Sbjct: 47  PRL-GHDPDGRLSDEVL--EAEAQIRKASAEAGFYAMNMPAEVGGDD-------VSAVTW 96

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
            +A+ +   L  P  ++  ++A    P           + E       P           
Sbjct: 97  YLAKKQLAELGVPLTSA--VLAGPGGP----KPLLAQATGEQVERYLEPTMAGEKTTAFA 150

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLV 258
            TE   G+D   + ++ ++  D        +W  ++P +D   + A+   +        V
Sbjct: 151 QTEPGVGSDSPNMATRAERDGDEWVLNGTKQWITNAPYADFVQVFARTSPQDEVGRYGGV 210

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              + +          L N +G       E+E  +       +LG+   +     D   L
Sbjct: 211 TCFIVEADE--YEIGSLNNAVGAVGRQ-AEVELDDVRIPADRVLGEEGAAFYDAMDFLGL 267

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             ++ A  SV      L  A  +A  R   G  + +   +   IA    +  AA A   R
Sbjct: 268 GRIEIAAESVGRTNWLLDAATEFANDREAFGRTIGNFQGISHKIARGRANAFAADAAGLR 327

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D+ ++   E++  + +A  T +        V  + ++  G  G  EE     +  
Sbjct: 328 CAWLLDQGEAAIAESSICKWLATNTFW-------EVADDVVQIHGSDGLAEENPFMDNIH 380

Query: 436 ESPANSILLGSGNAMVLDVLN 456
            +    I+ G+    +  +  
Sbjct: 381 RARIMRIVEGTDEIQLNTIAK 401


>gi|148266657|ref|YP_001245600.1| acyl-CoA dehydrogenase domain-containing protein [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150392697|ref|YP_001315372.1| acyl-CoA dehydrogenase domain-containing protein [Staphylococcus
           aureus subsp. aureus JH1]
 gi|253315414|ref|ZP_04838627.1| acyl-CoA dehydrogenase domain-containing protein [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|269201880|ref|YP_003281149.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|296276439|ref|ZP_06858946.1| putative acyl-CoA dehydrogenase [Staphylococcus aureus subsp.
           aureus MR1]
 gi|147739726|gb|ABQ48024.1| acyl-CoA dehydrogenase domain protein [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945149|gb|ABR51085.1| acyl-CoA dehydrogenase domain protein [Staphylococcus aureus subsp.
           aureus JH1]
 gi|262074170|gb|ACY10143.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|285815957|gb|ADC36444.1| Glutaryl-CoA dehydrogenase [Staphylococcus aureus 04-02981]
 gi|312828754|emb|CBX33596.1| acyl-CoA dehydrogenase, middle domain protein [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315130208|gb|EFT86196.1| acyl-CoA dehydrogenase domain protein [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725944|gb|EGG62423.1| acyl-CoA dehydrogenase, C-terminal domain protein [Staphylococcus
           aureus subsp. aureus 21172]
          Length = 403

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKKTGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|15923223|ref|NP_370757.1| putative acyl-CoA dehydrogenase FadD [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|156978563|ref|YP_001440822.1| hypothetical protein SAHV_0232 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|255005028|ref|ZP_05143629.2| hypothetical protein SauraM_01135 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|14246000|dbj|BAB56395.1| putative acyl-CoA dehydrogenase FadD [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|156720698|dbj|BAF77115.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
          Length = 403

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKKTGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|118467950|ref|YP_886431.1| acyl-CoA dehydrogenase family protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169237|gb|ABK70133.1| acyl-CoA dehydrogenase family protein [Mycobacterium smegmatis str.
           MC2 155]
          Length = 414

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/436 (13%), Positives = 122/436 (27%), Gaps = 46/436 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG---ER 93
           ++    L   +A   + +  E++ L         + +    +        +  GG     
Sbjct: 3   FTLPEHLRDTLAEMDAFIEAEIKPL-------ERENIQYFDHRREHARTDWDNGGVPRRE 55

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-------AHKIRAARLYLMAQL 146
           W+++        + RR+   G         F               H      L L   L
Sbjct: 56  WEELL-----DEMRRRADAAGWLRYGLPARFGGRDGTNLDMAVIREHLAHK-GLGLHNDL 109

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +    +  +     M+    T     +W   + +                ++  GLTE  
Sbjct: 110 QDESSIVGNFPQVIMMDRFGTETQKDEWVEAMITG-------------KRSMAFGLTEPG 156

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDG 265
            G+D   + +   +  +        +W      +   ++ A+  G  G    +   L   
Sbjct: 157 HGSDATWLETTAVRDGEDWIINGTKRWNTGVHRATHDLIFARTSGERGQALGITAFLVPT 216

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
              G           N      E+E +N       +LG+++      +       +  A 
Sbjct: 217 DAPGFHVPFYWWTF-NMPTDHGEVELTNVRVPADAVLGEVDRGLEVGQTFLHENRIRQAA 275

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            S+   +  +  A+ YA  R V G  L     ++  + ++  +      L +  A   D 
Sbjct: 276 SSLGAAQYCIDRAVTYAGEREVFGKPLAVNQAVQWPLVELQTEAQMVRLLVYYAATQLDA 335

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                           +  Y   ++       AM+  GG GY         YR      I
Sbjct: 336 NHHME-----VSDKVSMANYRANRLVCEAADRAMQVHGGIGYSRHEPFEHIYRHHRRYRI 390

Query: 443 LLGSGNAMVLDVLNLL 458
             G+    +  V   L
Sbjct: 391 TEGAEEIQMRRVAQRL 406


>gi|297621492|ref|YP_003709629.1| acyl-Coenzyme A dehydrogenase family protein [Waddlia chondrophila
           WSU 86-1044]
 gi|297376793|gb|ADI38623.1| acyl-Coenzyme A dehydrogenase family protein [Waddlia chondrophila
           WSU 86-1044]
          Length = 635

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 102/299 (34%), Gaps = 25/299 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WF 234
           K+F  E       P  +        LTE   G+D A +++  +   DG  Y L+G K W 
Sbjct: 161 KMFGTEEQKKKFFPRFREGAISAFALTEPEVGSDPAQMSATAKLTEDGKHYILNGTKLWC 220

Query: 235 LSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            +  ++D  +++A    +         +   + +    G+        +G  +     L+
Sbjct: 221 TNGTIADVIVVMANTAPKMVKGREKKQISAFILEMDTPGVEVVHRCEFMGLGAIYNGVLK 280

Query: 291 FSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F++                        +  L     SV G +  L+ A  + + R   G 
Sbjct: 281 FTDVKIPAENLIWKEGKGLSMALATINVGRLTLPAASVGGAKQCLSIARRWGKERVQWGL 340

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +      ++ +A I+    A  AL++  +   D+            I A + K +C + 
Sbjct: 341 PIGLHEEGRQKLAFISSTTFAMEALTYLTSAWADDGTVDIR------IEAAMAKLFCTES 394

Query: 408 APAVIAEAMECIGGSGYIE----------ERSIARHYRESPANSILLGSGNAMVLDVLN 456
              +    M+  GG GY +             + R  R+   N IL GS   M L +  
Sbjct: 395 FWKITDATMQLRGGRGYEKASSLKARGEPGYPVERAMRDCRINMILEGSSEIMRLFLAR 453


>gi|118470733|ref|YP_886441.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118172020|gb|ABK72916.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 406

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 105/276 (38%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 130 KDVWAAMAITEPGFGSDSAAVSTTAVLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 188

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   +      G+  +RL+ K+G +++ T  + F N        L      VE  
Sbjct: 189 LGRAAIKSFIVPREHPGVTVERLERKLGIKASDTAVIRFENVRIPKDNLLGDPEIHVEKG 248

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEA--------IHYARRRHVSGGILIDQPVMKRAIADI 362
              ++   D+    V+ M V +A A        +  A            Q         +
Sbjct: 249 FAGVMETFDNTRPIVAAMAVGIARAALEDLRAILTDAGVEISYDKPAHAQSAAAAEFLRM 308

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A   L+ R A   D     S+EA+  +  A        ++A  +  +A+E  G +
Sbjct: 309 EADWEAGYLLTVRSAWQADNNIPNSKEASMGKAKAA-------RVASDITLKAVEMAGTT 361

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+     L V   L
Sbjct: 362 GYSEQTLLEKWARDSKILDIFEGTQQIQQLVVARRL 397


>gi|197295058|ref|YP_002153599.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
 gi|195944537|emb|CAR57140.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315]
          Length = 616

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 89/522 (17%), Positives = 176/522 (33%), Gaps = 85/522 (16%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D   +A    + +     ++ L E      A +L R    A+     L   G    
Sbjct: 18  LFEADKRFLAEHGLYGTHDRASIDALLERA-RDFALDLGRSYQQADVEGCTLLDDG---- 72

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGH 150
              +V     +HAL  R   +      W  +           +      +++ A      
Sbjct: 73  ---QVRIPSHFHALWARFRDE------WSNTLFGTAHGLPPIVTQMIYEMFMGANPSFMT 123

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +  ++ +  TP                    AP++          TE + GTD
Sbjct: 124 YGGFTRPAIKLLQMHGTPHQKA--------------LIAPLEAYRWDACFCATEPQAGTD 169

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           + A+  +   +   +Y + G K ++S+ M +      + +L +++        + C +VP
Sbjct: 170 LTAVALRATPLERDVYAIDGEKVYISAGMHELTENTLYFVLGRIDTASPDSFSLSCLVVP 229

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVE 310
           R   D       PN +    L  K+G +  A   L F     T G+LLG   NV    + 
Sbjct: 230 RFWPDDETGELQPNHVDCIGLPRKMGLKGCANTHLVFGANGTTKGWLLGGRRNVGLLQLM 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKR 357
            +     + + +  V     +   A+ YA RR   G  +             ++   ++R
Sbjct: 290 PLMNQARMSTGMFGVGVASSAYLHAVEYAGRRLQ-GRPIERASNTNAARVAIVEHADVQR 348

Query: 358 AIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWCCK 406
            + D+   +     L  +LA      +  EA   ++ A   R       + PI K +   
Sbjct: 349 MLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFISD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTN 463
            A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + + 
Sbjct: 409 QAWRICETAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRHSR 468

Query: 464 LFEQLFSTLEQDLGS----SGKKVITILRDSISLCKEDKGLA 501
           L +     L+  L      +    +  L D++    +    A
Sbjct: 469 LIQYYRDELDAFLAQQHHTATHAELRPLFDALRAGADRIAAA 510


>gi|307105930|gb|EFN54177.1| hypothetical protein CHLNCDRAFT_24792 [Chlorella variabilis]
          Length = 403

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 127/366 (34%), Gaps = 30/366 (8%)

Query: 94  WDKVEF-HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W++ EF  P      +  I  G H   +      V+      +  AR+       +   +
Sbjct: 45  WERAEFPFPLVPGFQKLGIGGG-HLQGYGCQGLSVMGAAMAAVELARVD---GSCSTFFL 100

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S  +   V L+ +    ++  P+             M          LTE   G+D +
Sbjct: 101 VHSFLATLTVGLLGSEAQKQELLPE-------------MADFRRVGCWALTEPSNGSDAS 147

Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
           A+ +  +++  G       +W  ++  +D  ++ A+         V   +      G   
Sbjct: 148 ALATVARRVQGGWVLNGRKRWIGNATWADIAVIWAR---NSETSQVNAFIVRKGNPGYSA 204

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRV 330
            +++NKI  R     +++ ++ F      +   +   +  K+L    +  A   V     
Sbjct: 205 TKMENKIALRCVQNGDIKLTDAFVPDADRIPGVSSFSDTNKVLAISRIMVAWQPVGLALG 264

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +      Y ++R   G  L    +M+  +  +     A   +++RL   ++  K   E+ 
Sbjct: 265 AYDMCARYLQQRRQFGAPLASFQLMQEKLQRMLSTCQAMWLMAWRLTKLYEAGKLTHEQ- 323

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
                 A + K W       V+A   E +GG+G + E  +A+ + ++ A     GS    
Sbjct: 324 ------ASLVKAWTTLRGREVVALGRELLGGNGILSEFLVAKAFCDAEAYYSYEGSYEVN 377

Query: 451 VLDVLN 456
            L    
Sbjct: 378 ALVAGR 383


>gi|316935085|ref|YP_004110067.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602799|gb|ADU45334.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           DX-1]
          Length = 424

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 128/440 (29%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    LVA +A     +  +++ L        A +  R  ++           G     
Sbjct: 3   FSLPPDLVAYLAELDRFIDAKIKPL------EQADDNIRFFDHRREWARTDFEHGGLPRH 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQL 146
            W+++            +   G       + +                  A  L L   L
Sbjct: 57  DWEELL-----RKAKDLADEAGHLRFAIPKRYGGQDGTNLWMAVIREHFAAKGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +     M+ L             +              K    I  GLTE  
Sbjct: 112 QNEHSIVGNFPIVKMLDLYGRDDQKA-----MIDG---------SIKGKYRITFGLTEPD 157

Query: 207 GGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++ +   +     + ++G K + +         + A+  G  G    +   
Sbjct: 158 HGSDATHMETRAEEATRDGKKGWVINGEKMWTTGMHVATHCALFARTSGNDGDARGITCF 217

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F++ F     + G++       +       +
Sbjct: 218 LVPADATGVKVEEYLWTF-NMPTDHPRVSFTDVFVTEEAVFGEVGRGLSLAQCFVHENRI 276

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E++ YAR R   G  L     ++  + ++A        L  + A 
Sbjct: 277 RQAASSLGAAVFCINESVKYARERKPFGEELARNQAIQFPLVELATQAEMLRLLIRKTAW 336

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 337 EMDQMTQAQVEHTLSDK-VSMCNYWANRLCGQAADRAIQVHGGIGYSRHKQFEHIYRHHR 395

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 396 RYRITEGSEEIQMRKVAGFL 415


>gi|238060539|ref|ZP_04605248.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
 gi|237882350|gb|EEP71178.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149]
          Length = 654

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 133/373 (35%), Gaps = 44/373 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
            + R     G      DR +  +     H  RA  L        G L+S   S+     +
Sbjct: 102 EVFRGLARLGAFGMKIDREYGGLGLSNLHYCRALMLAGSVSPAIGALLSAHQSIGVPQPL 161

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            +  T    + + P++ + E                   LTE   G+D A + +  +  +
Sbjct: 162 KMFGTGEQKRSFLPRLAAGE--------------VSAFLLTEPDVGSDPARLATTAEPTA 207

Query: 223 DGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K W  +  ++   +++A+V    G    +   + DG   G+  +R     
Sbjct: 208 DGTGYRLNGVKLWATNGTVATLLVVMARVPASEGRRGGITAFVVDGDAEGITVERRNEFT 267

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LA 333
           G R        F + F       NV  G  + +KI L  L++  +S+  M V      L 
Sbjct: 268 GLRGLENSLTRFHDVFVPA---ENVIGGEGKGLKIALTTLNTGRLSLPAMCVGAGKWSLN 324

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  +A  R   G  + +   + + +A +A        +        D+ ++        
Sbjct: 325 VAREWAADRVQWGRPVGEHEAVAQKLAFVAATTYGMETMLDLCCLLADDDRNDIR----- 379

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--------ERS--IARHYRESPANSIL 443
            I A + K +  +MA  +  E ++  GG GY          ER   + +  R+   N I 
Sbjct: 380 -IEAALVKLYASEMAWKIGDELIQIRGGRGYETADSLAARGERPAAVEQLLRDLRINRIF 438

Query: 444 LGSGNAMVLDVLN 456
            GS   M L +  
Sbjct: 439 EGSTEIMHLLIAR 451


>gi|50084589|ref|YP_046099.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|2623972|emb|CAA05331.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
 gi|49530565|emb|CAG68277.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1]
          Length = 401

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 110/279 (39%), Gaps = 28/279 (10%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
                 + +TE   G+D AAI +   K  D  Y L+G K +++S   +D+ ++ A ++ +
Sbjct: 126 KGTWAAMAITEPGCGSDSAAIRTTAVKAGDE-YILNGEKIYVTSGERADSVVVWATLDRK 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-----VSTG 307
           +G   +   +      G+  +RL++K+G +++ T  + F +        L      V+ G
Sbjct: 185 LGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAAISFIDCRVPAANLLGNAEIDVAKG 244

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR--------RHVSGGILIDQPVMKRA 358
                 ++   D+    V+ M V  A+A +   +          + +  +      +   
Sbjct: 245 FA---GVMETFDNTRPLVAAMAVGCAKASLERIKEIFKDELDTDYATPYLQTSF--IAAQ 299

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           I  +  +  AA  L+ +     D  K  S+E       A I K    ++   +  + +E 
Sbjct: 300 IYRMEAEWEAARLLTLKATWMADNKKPNSKE-------ASIAKAKAGRICNEITLKCVEL 352

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
               GY E+  + +  R+S    I  G+    +L +   
Sbjct: 353 AASVGYNEDELLEKWARDSKILDIFEGTQQIQLLIIARR 391


>gi|257424368|ref|ZP_05600797.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427039|ref|ZP_05603441.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429675|ref|ZP_05606062.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432322|ref|ZP_05608685.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435282|ref|ZP_05611333.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus M876]
 gi|282913080|ref|ZP_06320872.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282922707|ref|ZP_06330397.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           C101]
 gi|293498132|ref|ZP_06665986.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511723|ref|ZP_06670417.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293550333|ref|ZP_06673005.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|257273386|gb|EEV05488.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276670|gb|EEV08121.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257280156|gb|EEV10743.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257283201|gb|EEV13333.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285878|gb|EEV15994.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus M876]
 gi|282314928|gb|EFB45314.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282323180|gb|EFB53499.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|290919380|gb|EFD96456.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291097063|gb|EFE27321.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291465681|gb|EFF08213.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           M809]
          Length = 418

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PKAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|302331970|gb|ADL22163.1| Mn2+ and Fe2+ transporter of the NRAMP family-like protein
           [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 403

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|323440209|gb|EGA97923.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus O11]
 gi|323443379|gb|EGB00995.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus O46]
          Length = 418

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|115360877|ref|YP_778014.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115286205|gb|ABI91680.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD]
          Length = 615

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 92/524 (17%), Positives = 177/524 (33%), Gaps = 90/524 (17%)

Query: 36  AYSSDSLLVALIANFPSVVH--KELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPG 90
            + +D      + + P   H    ++ L E      A +L R    A+     L   G  
Sbjct: 18  LFEAD---RHFLEHGPYSAHDRASIDALLERA-RDFALDLGRSYQQADVEGCTLLDDG-- 71

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEA 148
                +V     +HAL  R   +      W  +           +      +++ A    
Sbjct: 72  -----QVRIPSHFHALWARFRDE------WSNTLFGTAHGLPPIVTQMIYEMFMGANPSF 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                 +  +  ++ +  TP                 +  AP++          TE + G
Sbjct: 121 MTYGGFTRPAVKLLQMHGTPHQK--------------SLIAPLEAYRWDACFCATEPQAG 166

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFL 257
           TD+ A+  +   +   IY + G K ++S+ M +      + +L +++        + C +
Sbjct: 167 TDLTAVALRATPLERDIYAVDGEKVYISAGMHELTENTLYFVLGRIDSASPDSFSLSCLV 226

Query: 258 VPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGP 308
           VPR   D       PN +    L  K+G +  A   L F     T G+LLG   NV    
Sbjct: 227 VPRFWPDEETGELQPNHVDCIGLPRKMGLKGCANTHLVFGANGTTRGWLLGGRRNVGLLQ 286

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVM 355
           +  +     + + +  V     +   A+ YA RR   G  +             ++   +
Sbjct: 287 LMPLMNQARMSTGMFGVGVASSAYLHAVEYASRRLQ-GRPIERASNTNAARVAIVEHADV 345

Query: 356 KRAIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWC 404
           +R + D+   +     L  +LA      +  EA   ++ A   R       + PI K + 
Sbjct: 346 QRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFI 405

Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KG 461
              A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + 
Sbjct: 406 SDQAWRICETAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRH 465

Query: 462 TNLFEQLFSTLEQDLGS----SGKKVITILRDSISLCKEDKGLA 501
           + L +     L+  L      S    +  L D++    +    A
Sbjct: 466 SRLIQYYRDELDAFLAHQHHGSTHAELRPLFDALRAGADRIAAA 509


>gi|307592218|ref|YP_003899809.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
 gi|306985863|gb|ADN17743.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
          Length = 1211

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/415 (18%), Positives = 142/415 (34%), Gaps = 33/415 (7%)

Query: 94   WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
             D+    P +  L     + GL        +  +  K    +R         L    L+ 
Sbjct: 638  IDERRCLPPYIVLD--FGNQGLMGLQVPEKYGGLALKNRDLLRVFEQLAAIDLSIASLLF 695

Query: 154  PSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
               T+    +    TP + ++  P              + +        LTE   G+++ 
Sbjct: 696  IHNTNGVRPLVGYATPTIQEELLP-------------ILAQGRELAAFALTEPTAGSNLP 742

Query: 213  AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNG 269
             I +     + G + L G K + +S  +    + A+     G+VG       +      G
Sbjct: 743  NIGTIAIPDAKGGWRLRGAKRWNASGWAGIIHVFAKTLDENGKVGHP--SAFVVRQRTPG 800

Query: 270  LCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
            L        +G R      + F +       LLG++N      E+  +L +L  A +SV 
Sbjct: 801  LQVGPESLTMGVRGIMQNIIYFDDVLVSPTQLLGEVNKGMDVAEEAMLLAHLCMASLSVG 860

Query: 327  G-MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G M+      + YA RR VS G L+D P +   ++++ + I     L  +L    DE   
Sbjct: 861  GGMKRCAQLMLRYANRRQVSTGRLLDNPTILAVLSELTIKITLIQNLLNQLVTVLDEEDY 920

Query: 386  RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
              +E         + K            + +E +GG GY+E     +  R+     I  G
Sbjct: 921  PPKEIGM------MLKILSTDYLWQASDDLVETLGGRGYMENNIAPQIMRDCRMLRIGEG 974

Query: 446  SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500
            +   M + V   +     L + L + L     S  +++    +   + C    G 
Sbjct: 975  ANEIMTITVGRRVFHSEELHQFLINRLGNAAMS--ERLKEAAQQIQARCLSANGR 1027


>gi|302344616|ref|YP_003809145.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
 gi|301641229|gb|ADK86551.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM
           2075]
          Length = 413

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 130/374 (34%), Gaps = 32/374 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           +  L+++    G H  +   ++  +                  +     +  +     + 
Sbjct: 51  YWTLMKKMYELGYHTVLIPDAYGGLGLDPIANHIFWEEMAYGSVGLAVSLGCAAFGPFIC 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD---IAA------ 213
           A+M    + + +                    SV    G+TE   G+D            
Sbjct: 111 AMMAEDELTEAYITPFVECR----------DASVMSCWGITEPNHGSDNLMPGGPQFFNP 160

Query: 214 ---ITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269
                 +  K  D          ++S+  ++   ++   ++  +G       L D +  G
Sbjct: 161 KITQQVKAAKKGDQFVLSGQKSAWISNGTIASNSMLFCNLDPSMGLAGGGICLVDLTQAG 220

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV---S 326
           +   +  +K+G R     E+ F          +           +++ L +A M      
Sbjct: 221 VSRGKPLDKLGQRDLPQGEVYFDEAVVPAGHFICDQESYTMITDMVVALANAHMGAFFTG 280

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
             R +   A+ Y+  R   G  L + P ++R + D+   I A+  LS R A  ++ + + 
Sbjct: 281 VARSAYDLALQYSTERVQGGKRLCEHPTIQRRLFDMFSKIEASRYLS-RAAMVYNMSTTP 339

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                     +  +K +C + A  V ++A++  GG G  +E  I + +R++ A  I  G+
Sbjct: 340 PN-----TKYSIASKVFCTQAAFEVASDALQIFGGYGLTKEYPIEKIFRDARAGLIEDGA 394

Query: 447 GNAMVLDVLNLLEK 460
            +++ L   + + +
Sbjct: 395 NDSLALHAASDIVR 408


>gi|326329901|ref|ZP_08196216.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325952292|gb|EGD44317.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
          Length = 454

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 129/345 (37%), Gaps = 28/345 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMV 162
            LL+ S+  GL           +   ++          +A+ + G  ++       A+ +
Sbjct: 132 ELLKSSLEIGLPILGVPEELGGISETRSAVAGTLVAEALAKGDLGLAVAALAPGSVATAL 191

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  T    + + P                    A    L E +   D+ + ++   K +
Sbjct: 192 GLWGTDEQQQTYLPAFTEGNVP------------AAAFALNEDKVLFDVLSPSTTATKTA 239

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           DG               ++ F++ A ++G+   FLV     + S  GL  +  +  +G R
Sbjct: 240 DGYTITGAKSLVARGAEAELFVVGASLDGKPVLFLV-----ESSTPGLSIES-EPAMGVR 293

Query: 283 SNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
           + +  +L  ++        L  + G    +   L  L    +S+   +  L     Y + 
Sbjct: 294 AASLTKLTLTDVKVPATAVLGETDGSTYTEAVRLSRLAWCALSIGVGQAVLDYVTPYVKE 353

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  +  +  +   +A+IA+++ A   ++++ A+   +    + E A AR +     
Sbjct: 354 REAFGEPIAHRQSVAFMVANIAIELQAMRLVTYKAASRVAQGIDATREIALARKL----- 408

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             C      +  + ++ +GG G+++E  + R YR+  A  I+ G+
Sbjct: 409 --CADKGMQIGLDGVQLLGGHGFVKEHPVERWYRDLRAIGIMEGT 451


>gi|119504763|ref|ZP_01626841.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459368|gb|EAW40465.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium
           HTCC2080]
          Length = 393

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 111/344 (32%), Gaps = 36/344 (10%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL----MSPSVTSASMVALMTTP 168
           + L  + +     P V   A     A   ++ ++             + +   +    + 
Sbjct: 49  EALTAAGYLSVMIPEVYGGAGLPLGAACAILEEIHRSGCNGGACHAQMYTMGTLLRHGSE 108

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              + + P++ S                    G+TE   GTD   I +   +  D     
Sbjct: 109 AQKQRYLPEVASG------------ALRLQAFGVTEPNSGTDTTRIRTHAVQDGDDYVVN 156

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSP---NGLCYQRLKNKIGN 281
               W   +  SD  ++L +   R         +  LL D       GL  + +K  + N
Sbjct: 157 GQKIWISRAEHSDLLVLLVRTTPREDCAKRSDGMSVLLVDMRTAVGRGLTIKPIKTMM-N 215

Query: 282 RSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                 EL F +        +G+       + D      +  A   +   +  +  +  Y
Sbjct: 216 HGA--TELFFDDLRVPMANRIGEEGKGFRYILDGMNAERILIAAECIGDAKYFVEASAKY 273

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R V G  +     ++  IA   +   AA  +  R  + F+  +S   EA  A+++A 
Sbjct: 274 ASEREVFGAPIAKNQGVQFPIARAHIQAQAAAGMVRRAIDLFEAGESCGSEANMAKLLAS 333

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              +             ++  GG+G+  +  I R +RE+    +
Sbjct: 334 EASWAAGDT-------CIQTFGGAGFATDYDIERKFRETRLYQV 370


>gi|162450269|ref|YP_001612636.1| putative Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
 gi|161160851|emb|CAN92156.1| putative Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 417

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 118/325 (36%), Gaps = 28/325 (8%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + +     +  + L  +    +   P + S                     LTE   
Sbjct: 100 ADAIFAVQGLGSYPIVLAGSDAQRRAILPDVLSG-------------RRIGAFALTEPEA 146

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLED 264
           G+D+A++ ++ ++  DG           + P++   ++ A+        G   +   L D
Sbjct: 147 GSDVASLRTEARREGDGWVLDGEKVLISNVPLAHHLVVFARTGAPPRDGGRAAITAFLVD 206

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
               G+  + L   +    +    L F          L    G  +    +  LD+  +S
Sbjct: 207 SGAEGVASEPLPMSV---PHPIGRLRFERCRVPDSARLGEVGGGFK--LAMQTLDAFRIS 261

Query: 325 VSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           V           L EAI +  RR   G  L +Q +++  +A++A ++ AA  L  R A+ 
Sbjct: 262 VGAAANGMAARALREAIAHVTRRRQFGAPLSEQQMVRAYLAEMATELDAARLLVARAAHK 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
            D A + +  AA     A + K +  + A  +I  A++  GG G IE   + R YRE   
Sbjct: 322 RDTAAAGA--AARVSTEAAMAKMFATEAAQRIIDRAVQLHGGMGVIEGTEVERLYREIRP 379

Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464
             I  G+     L +   + +    
Sbjct: 380 LRIYEGTTEIQKLIIAKGILERAAA 404


>gi|255938478|ref|XP_002560009.1| Pc14g00140 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584630|emb|CAP74155.1| Pc14g00140 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 453

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 132/447 (29%), Gaps = 54/447 (12%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEF---HPAWHA 105
           + P+ +   LE +  ++ S T   L    + N  +   +    ER D          W  
Sbjct: 4   DLPADLKTHLESIDSFIHS-TILPLQHSNDNN--RFFDHRREYERTDWENNGNPRKEWEE 60

Query: 106 LLRRSI----HDGLHCSIWDRSFEPVVRKQAHKIRAARLY-------------LMAQLEA 148
           LL  +       GL+     R +        +   +A  Y             L   L+ 
Sbjct: 61  LLGEARTLADSSGLYRFALPRVYGGQSHPDVNLWMSAIRYHLSSNAVYGGGLGLANDLQN 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            H +  +     M+      +      P     E+  T              GLTE   G
Sbjct: 121 EHCIVGNFPDVLMLHHFGNEQQRNTLIPARLRGEFRTT-------------FGLTEPDHG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           +D   +++  +    G       KW   +     F++ A+  G+ G    +   L     
Sbjct: 168 SDATFMSTTARPTRGGFEIKGAKKWQTGAHHCTHFLIFARTSGKAGSAQGITAFLVPRDT 227

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMS 324
            G+     +  + N       +E ++ +      L          +       +  A  S
Sbjct: 228 RGVRIVSYEWTL-NMPTDHATVELNSVWVPESAVLGSIDQGLAIAQTFVHENRIRQAASS 286

Query: 325 VSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               R  L  +I  AR R + G    L D   ++  + ++   +        + +   D 
Sbjct: 287 CGAARYCLDRSIDRARARKIWGEGKSLADNQAIQFPVVELMTQVEMLRLFILKTSWEMDR 346

Query: 383 --AKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
             A+ +S +A  A              +  +W  ++       A++  GG GY       
Sbjct: 347 IVAECQSSKAQRAPWVEIEGRLSDQVAMCNFWANRLCCQAADRAIQIHGGDGYSRHYPFE 406

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
             YR      I  G+    +  +   +
Sbjct: 407 HIYRHFRRYRITEGAEEIQMRKIGAYI 433


>gi|86157842|ref|YP_464627.1| acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774353|gb|ABC81190.1| Acyl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 649

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 143/397 (36%), Gaps = 47/397 (11%)

Query: 94  WDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+  E+ P     LR+    G+     +       + +  K+ A      A L A    
Sbjct: 78  IDETGEYPPHVMEGLRKLGAFGM-KIPVEYGGLGFDQVEYGKVMALLGSWDANLTALLSA 136

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     + L  +  +   + P+I                       LTE   G+D A
Sbjct: 137 HQSIGVPQPLKLFGSDALKHKYLPRI--------------AKGAVSAFALTEANVGSDPA 182

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            + +  ++  DG  Y L+G K W  +  +++  +++A+         +   + + S  G+
Sbjct: 183 RLATTAERSPDGTHYVLNGAKLWCTNGTIAELLVVMAR---DPRTDAISAFVVETSWPGV 239

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV---- 325
                   +G R+ A   L F++         N+       +KI L  L++  +S+    
Sbjct: 240 EVTHRCRFMGLRAIANAALRFTDVKVPA---ENLIGKEGRGLKIALTTLNTGRLSLPAAV 296

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             G++ +LA +  +A  R   G  +     +   +AD+A    A  A+S    +  D   
Sbjct: 297 AGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAMEAVSDLAQSLADH-- 354

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----------SIARHY 434
               E    R+ A   K W    A  +I E M+  GG GY  ER           + R  
Sbjct: 355 ----EGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETERSLAARGETPVGVERWM 410

Query: 435 RESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFS 470
           R++  N I  GS   M L +    ++K   +   L  
Sbjct: 411 RDARINLIFEGSSEIMHLFMAREAVDKHLQVAGALID 447


>gi|156972244|gb|ABU98950.1| acyl-CoA oxidase [Glycine max]
          Length = 400

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 96/287 (33%), Gaps = 25/287 (8%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             ++  S  +   +AL  +    + + P +              +        LTE   G
Sbjct: 134 TFILVHSSLAMLTIALCGSEAQKQKYLPSL-------------AQLQTVACWALTEPDYG 180

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +D +A+ +   K+  G       +W  +S  +D  ++ A+         +   +      
Sbjct: 181 SDASALKTTATKVEGGWILEGQKRWIGNSTFADVLVVFAR---NASTNQINGFIIKKDAP 237

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVS 326
           GL   +++NKIG R     ++     F      +       +  K+L    +  A   + 
Sbjct: 238 GLTVTKIENKIGLRIVQNGDIVMRKVFVPDEDRIAGVNSFQDTNKVLAVSRVMVAWQPIG 297

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                      Y + R   G  L    + ++ +  +  +I A   + +RL   ++  K  
Sbjct: 298 ISMGIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGK-- 355

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
                     A + K W    A    A   E +GG+G + +  + RH
Sbjct: 356 -----MTPGQASLGKSWITLRARETAALGRELLGGNGILADFLVRRH 397


>gi|145225035|ref|YP_001135713.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|145217521|gb|ABP46925.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 403

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 25/279 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++  +   D  Y ++G K ++++       ++ A ++  
Sbjct: 127 GKVWAAMAITEPGFGSDSAAVSTTAKLDGDE-YVINGEKIYVTAGSRATHIVVWASLDKS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
            G   +   +      G+  +RL++K+G +++ T  + F N            D+NV  G
Sbjct: 186 KGRAAIKSFIVPREHPGVTVERLEHKLGIKASDTAAIRFDNVRIPRENLLGSPDINVEKG 245

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAI 359
                 ++   D+    V+GM V +A A     R+ ++              Q       
Sbjct: 246 FA---GVMETFDNTRPVVAGMAVGVARAALEELRKILTDAGIEISYDKPAHAQSAAAAEF 302

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  +   L+ R A   D     S+EA+  +  A        ++A  +  + +E  
Sbjct: 303 LRMEADWESGYLLTLRSAWQADNRIPNSKEASMGKAKAA-------RVASDITLKTVELA 355

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 GTTGYSEQALLEKWARDSKILDIFEGTQQIQQLVVARRL 394


>gi|151220381|ref|YP_001331204.1| acyl-CoA dehydrogenase FadD-like protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161508493|ref|YP_001574152.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253730579|ref|ZP_04864744.1| acyl-CoA dehydrogenase FadD family protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|258451663|ref|ZP_05699689.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus A5948]
 gi|282902814|ref|ZP_06310707.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907215|ref|ZP_06315063.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907559|ref|ZP_06315401.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282915554|ref|ZP_06323326.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282921527|ref|ZP_06329245.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus C427]
 gi|282921876|ref|ZP_06329575.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A9765]
 gi|283767966|ref|ZP_06340881.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283959669|ref|ZP_06377110.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|294849159|ref|ZP_06789903.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A9754]
 gi|297209261|ref|ZP_06925660.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297589029|ref|ZP_06947670.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380187|ref|ZP_07362907.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|14029178|gb|AAK51156.1| putative acyl-CoA dehydrogenase FadD [Staphylococcus aureus]
 gi|150373181|dbj|BAF66441.1| acyl-CoA dehydrogenase FadD homolog [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160367302|gb|ABX28273.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725719|gb|EES94448.1| acyl-CoA dehydrogenase FadD family protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257860711|gb|EEV83533.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus A5948]
 gi|282315942|gb|EFB46326.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus C427]
 gi|282320657|gb|EFB50995.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282328464|gb|EFB58735.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330114|gb|EFB59635.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282593930|gb|EFB98920.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A9765]
 gi|282597273|gb|EFC02232.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|283461845|gb|EFC08929.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283789261|gb|EFC28088.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|294824051|gb|EFG40476.1| glutaryl-CoA dehydrogenase [Staphylococcus aureus A9754]
 gi|296886194|gb|EFH25128.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297577540|gb|EFH96253.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
 gi|302750102|gb|ADL64279.1| Mn2+ and Fe2+ transporter of the NRAMP family-like protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304341168|gb|EFM07087.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320141550|gb|EFW33391.1| acyl-CoA dehydrogenase protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142300|gb|EFW34115.1| acyl-CoA dehydrogenase protein [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 418

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|167842244|ref|ZP_02468928.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 386

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 111/361 (30%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P   A +      G   ++    +                   A       
Sbjct: 28  RKIDEERGYPE--AFVDALTKAGWLAALIPHEYGGSGLGLTEASIIMEEINRAGGN-SGA 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + +   +    +      + P+I S                   +G+TE   GTD 
Sbjct: 85  CHGQMYNMGTLLRHGSDEQKARYLPRIASG------------ALRLQSMGVTEPTAGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSP 267
             I +   +  D         W      SD  I+LA+             +   L D   
Sbjct: 133 TKIKTTAVRRGDRYVVNGQKVWISRVQHSDLMILLARTTPLSDVTKKSEGMSIFLVDLHD 192

Query: 268 ---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  + + N + N    T EL F N       L+G+       + D         A
Sbjct: 193 AIGHGMTVRPIPN-MVNH--ETNELFFDNLEIPAENLIGEEGQGFKYILDGLNAERALIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   Y + R V G  +     ++  IA   +++ AA+ + +R    FD
Sbjct: 250 AECIGDGYWFIDKVSRYVQERVVFGRPIGQNQGVQFPIARAYVNVEAASLMRYRACALFD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 310 AQEPCGAQANMAKLLAADASW-------EAANACLQFHGGFGFACEYDVERKFRETRLYQ 362

Query: 442 I 442
           +
Sbjct: 363 V 363


>gi|220917630|ref|YP_002492934.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955484|gb|ACL65868.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 646

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/397 (20%), Positives = 143/397 (36%), Gaps = 47/397 (11%)

Query: 94  WDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+  E+ P     LR+    G+     +       + +  K+ A      A L A    
Sbjct: 78  IDETGEYPPHVMEGLRKLGAFGM-KIPVEYGGLGFDQVEYGKVMALLGSWDANLTALLSA 136

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     + L  +  +   + P+I                       LTE   G+D A
Sbjct: 137 HQSIGVPQPLKLFGSDALKHKYLPRI--------------AKGAVSAFALTEANVGSDPA 182

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            + +  ++  DG  Y L+G K W  +  +++  +++A+         +   + + S  G+
Sbjct: 183 RLATTAERSPDGTHYVLNGAKLWCTNGTIAELLVVMAR---DPRTDAISAFVVETSWPGV 239

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV---- 325
                   +G R+ A   L F++         N+       +KI L  L++  +S+    
Sbjct: 240 EVTHRCRFMGLRAIANAALRFTDVKVPA---ENLIGKEGRGLKIALTTLNTGRLSLPAAV 296

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             G++ +LA +  +A  R   G  +     +   +AD+A    A  A+S    +  D   
Sbjct: 297 AGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAMEAVSDLAQSLADH-- 354

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----------SIARHY 434
               E    R+ A   K W    A  +I E M+  GG GY  ER           + R  
Sbjct: 355 ----EGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETERSLAGRGETPVGVERWM 410

Query: 435 RESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFS 470
           R++  N I  GS   M L +    ++K   +   L  
Sbjct: 411 RDARINLIFEGSSEIMHLFMAREAVDKHLQIAGALID 447


>gi|167562751|ref|ZP_02355667.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           EO147]
          Length = 388

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 114/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H   R     G         +        +A  +  A     A L     +  ++   + 
Sbjct: 39  HDFHRALADAGWLGVAMSPEYGGAGLGIIEAALMMRAISASGAGLSGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  +      + P             P+          +TE   G D   + +Q  + 
Sbjct: 99  VQVFGSAEQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLKTQAVRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ +++  +++A+             +     D   + +  + + +
Sbjct: 146 GDHYVLNGRKIWISTAQVANKMLIIARTTPLERVAKPADGLSLFYADLDRSRVDVREI-D 204

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R+  +  L   +    +   +GD       +        +  A  +V   + +L  
Sbjct: 205 KMGRRAVDSNLLFIDDLRVPVADRIGDEGEGFRYLLHGLNPERILIAAEAVGLGQAALRH 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A   + + AA  +  + A S+D       +A  A+
Sbjct: 265 ATRYANERIVFGRPIGRNQAIQHPLALAWMQLEAAHLMVLKAAASYDAGLPCGAQANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +A    +  C+ A       M  +GG GY +E  + R+ RE     +
Sbjct: 325 YLAAEAAFGACQAA-------MATLGGMGYAKEYHVERYLRECMIPRV 365


>gi|149374927|ref|ZP_01892700.1| acyl-CoA dehydrogenase, putative [Marinobacter algicola DG893]
 gi|149360816|gb|EDM49267.1| acyl-CoA dehydrogenase, putative [Marinobacter algicola DG893]
          Length = 401

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 127/391 (32%), Gaps = 41/391 (10%)

Query: 83  QLHAYGPGGERWDKVE-FHPAWHALLR-RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140
           +L       + +D+ E   P +   +R ++   GL C                       
Sbjct: 23  ELLPLEQNADAYDEHENIAPDYLEKMRAKAKQQGLWCLQIPEDLGGQGLDIVGMAACYEE 82

Query: 141 YLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              +          +P   + +++A + T    + W               PM +  V  
Sbjct: 83  MNRSIFGPVVFNAAAPDDGNMTVLAKVATKAQQERWLK-------------PMVEGRVRS 129

Query: 199 GLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255
              +TE     G+D   + +   +  D  + + GHK F++    +  FI++A+       
Sbjct: 130 SFVMTEPAPGCGSDPGMMQTTATRKGD-RWVIQGHKHFITGAAEASHFILIARTSDDT-R 187

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGN--RSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
             +   L      G    R    +G         EL+F    G  + D N      + +K
Sbjct: 188 KGLSAFLFHKDDPGWEIVRRIPIMGPEEHGGH-CELKFD---GLEIPDENRLMEVGDGLK 243

Query: 314 -ILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
              I L +A ++     +   R SL  A  Y   R   G  L  +  ++  + + A++I 
Sbjct: 244 LTQIRLGTARLTHCMRWLGLARRSLEIATEYVDNRESFGQPLAQREGVQWLLGEAAMEIQ 303

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               L+   A   D+         +AR    + K          +  A++  G  GY ++
Sbjct: 304 IGRLLTMHAAWKLDQGD-------FARKEVSMAKVAVADTLHKAVDTAIQLCGARGYSKD 356

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             +   YR +    ++ G+     +     L
Sbjct: 357 TPLEWIYRYARQARLVDGASEVHKMVFSKTL 387


>gi|296169198|ref|ZP_06850851.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896096|gb|EFG75763.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 411

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 113/357 (31%), Gaps = 26/357 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTP 168
            +  GL  S+  R    V      +  A + L L   L+    +  +     M+    T 
Sbjct: 72  WLRYGLPASLGGRDGTNVDMAVIREHLAHKGLGLHNDLQNESSIVGNFPQVIMMERFGTE 131

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228
              +DW+  + + E              ++  GLTE + G+D   + ++ Q   DG + +
Sbjct: 132 EQRRDWSEALITGE-------------RSMAFGLTEPQHGSDATWLETRAQADGDG-WII 177

Query: 229 SGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           +G K F +        ++ A+  G  G    +   L      G           N     
Sbjct: 178 NGSKRFNTGVHRATHDLVFARTSGEPGQARGITAFLVPTDAPGFDVPYYWWTF-NMPTDH 236

Query: 287 VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            E+  ++       +LG+++      +       +  A  S+   +  +  A  YA  R 
Sbjct: 237 GEVALTDVRVPADAVLGEVDRGLEVAQTFLHENRIRQAASSLGAAQYCIDRAAEYAGTRT 296

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
           V G  L     ++  +A++  +      L    A   D                 +  Y 
Sbjct: 297 VFGEPLSVNQAVQWPLAELQTEAQMVRLLVAYAAWHLDRDHHME-----VSDKVSMANYR 351

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++       AM+  GG GY         YR      I  G+    +  V   L K
Sbjct: 352 ANRLVCDAADRAMQIFGGLGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFK 408


>gi|16127684|ref|NP_422248.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|221236503|ref|YP_002518940.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
 gi|13425172|gb|AAK25416.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15]
 gi|220965676|gb|ACL97032.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000]
          Length = 435

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/443 (15%), Positives = 139/443 (31%), Gaps = 37/443 (8%)

Query: 54  VHKELELLGEYVLSCTAQELARMA--NYNTPQLHAYGPGGE-RWDKVEFHP-AWHALLRR 109
           +  EL    E + +  A+E+A +   + N              WD        W  LL +
Sbjct: 7   LSPELSAYLEELDAFIAKEIAPLQAKDDNQRFFDHRREWARTDWDAGGLPRHEWEELLAK 66

Query: 110 SIH----DGLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLEAGHLMSPSVTSA 159
           +       G +     +++                  +  L L   L+  H +  +    
Sbjct: 67  ARKLADKAGHYRYALPKAYGGQDGTNLGMAVIREHLASKGLGLFNDLQNEHSIVGNNPFV 126

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG- 218
            M+     P         +    + PT              GLTE   G+D   + +Q  
Sbjct: 127 LMIRDFGRPDQQHLIEDMLDRGAFRPT-------------FGLTEPDHGSDATHMETQAV 173

Query: 219 --QKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQR 274
             ++     + + G K + +   ++    + A+  G+ G    +   L      G+  + 
Sbjct: 174 REERHGQAGWRIDGEKMWTTGMHVATHCCLFARTSGQDGDARGITAYLVPAHAPGVKIEE 233

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
                 N       + F++ +     + G         +       +  A  S+      
Sbjct: 234 YLWTF-NMPTDHPRVSFTDVWVPDSAMFGPEGGGLALAQHFVHENRIRQAASSLGAAAYC 292

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           + E+I YAR R   G  L +   ++  I +++  +     L  + A   D+  S+ E   
Sbjct: 293 IEESIKYARARKPFGKALSENQAIQFPIVELSTQVEMLRLLIRKTAWEMDQ-MSKPEVEK 351

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  +  YW  ++       AM+  GG GY   +     YR      I  G+    +
Sbjct: 352 RLSDKVSMCNYWANRLCCEAADRAMQIHGGIGYSRHKPFEHIYRHHRRYRITEGAEEIQM 411

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQ 474
             V   L       +Q F+ +++
Sbjct: 412 RKVAAWLFGYMGPRKQAFAEMDK 434


>gi|39969817|ref|XP_366299.1| hypothetical protein MGG_10518 [Magnaporthe oryzae 70-15]
 gi|145010133|gb|EDJ94789.1| hypothetical protein MGG_10518 [Magnaporthe oryzae 70-15]
          Length = 455

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/449 (16%), Positives = 135/449 (30%), Gaps = 56/449 (12%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER--WDKVEFH-PAWHA 105
           + P  +   L  L  ++ S       R  N    +   +     R  WD      P W A
Sbjct: 4   DLPDDLQSFLARLDAFINSQILPLQHRDDNN---RFFDHRREASRTQWDNGGLPRPEWEA 60

Query: 106 LLRRSI----HDGLHCSIWDRSFEPVVRK-------------QAHKIRAARLYLMAQLEA 148
           LLR++       G     +   +                    +H +    L L   L+ 
Sbjct: 61  LLRQARQLADEAGFLRFAFPAEYGGAGNPRQNLWMCAIRLFLASHPVYGGGLGLPNDLQN 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            H +  +     M+    +P   +++                  +       GLTE   G
Sbjct: 121 EHSVVLNNPIVLMLHHYGSPAQKREFID-------------AAIRGDFVATFGLTEIHHG 167

Query: 209 TDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVG-CFLVPRLL 262
           +D   + +  ++I     +  + +SG+K + +   +    ++ A+  G  G    +   +
Sbjct: 168 SDATHMDTTARRITLPSGEPGFEISGNKRWQTGAHAATHHLIFARTSGTAGSARGITAFI 227

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                 GL     +  + N       L  +        +LGD++      +       + 
Sbjct: 228 VPRGSAGLEVASYEWTL-NMPTDHATLTLTRVAVPASCVLGDVDDGLAVAQTFTHENRIR 286

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A  S    R  +  A+ YAR R V G  L     ++  + ++A        L  R A  
Sbjct: 287 QAASSCGAARFCIDRAVDYARSRRVFGKPLAVNQGIQFPLVELATQQEMLRLLILRTATE 346

Query: 380 FDEAK----------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429
            D  +             E          +  Y+  ++A      A++  GG GY     
Sbjct: 347 MDAVERECEGDRGRRPWVEIEKRLGDRIAMCNYYANRLACEAADRAIQVFGGQGYSRHHP 406

Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458
               +R      I  GS    +  V   L
Sbjct: 407 FEHIWRHFRRYRITEGSEEVQMRRVAAAL 435


>gi|167569934|ref|ZP_02362808.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis
           C6786]
          Length = 388

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 113/348 (32%), Gaps = 30/348 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           H   R     G         +        +A  +  A     A L     +  ++   + 
Sbjct: 39  HDFHRALADAGWLGVAMSPEYGGAGLGITEAALMMRAISASGAGLSGASAVHMNIFGLNP 98

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           V +  +      + P             P+          +TE   G D   + +Q  + 
Sbjct: 99  VQVFGSAEQKARFLP-------------PLIAGRDKACFAVTEPDAGLDTTHLKTQAVRD 145

Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKN 277
            D         W  ++ +++  +++A+             +     D   + +  + + +
Sbjct: 146 GDHYVLNGRKIWISTAQVANKMLIIARTTPLERVAKPADGLSLFYADLDRSRVDVREI-D 204

Query: 278 KIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
           K+G R+  +  L   +    +   +GD       +        +  A  +V   + +L  
Sbjct: 205 KMGRRAVDSNLLFIDDLRVPVADRIGDEGEGFRYLLHGLNPERILIAAEAVGLGQAALRH 264

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  YA  R V G  +     ++  +A   + + AA  +  + A  +D       +A  A+
Sbjct: 265 ATRYANERIVFGRPIGRNQAIQHPLALAWMQLEAAHLMVLKAAARYDAGLPCGAQANAAK 324

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            +A    +  C+ A       M  +GG GY +E  + R+ RE     +
Sbjct: 325 YLAAEAAFGACQAA-------MATLGGMGYAKEYHVERYLRECMIPRV 365


>gi|56476483|ref|YP_158072.1| benzylsuccinyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56312526|emb|CAI07171.1| Benzylsuccinyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 406

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 114/363 (31%), Gaps = 31/363 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASM 161
            L+  +   G      D            K          L+     G  + P   +   
Sbjct: 53  RLMHITREMGFWGIEVDEKLGGQGLGMFAKTLVVEEMSKSLVGFSHHGFTLPPDAPNLYY 112

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    TP   + +  +    E D               +  TE   G+DI+ + +   + 
Sbjct: 113 LNECGTPAQREKYVRRYCRGEID-------------SAMMATEPAAGSDISGLATTAVRE 159

Query: 222 SDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
            +G + ++G K F+S    D   FI +A  +            + D    G+        
Sbjct: 160 -NGKWVINGSKIFISKCDKDELFFICIAVTDKAAATKRRFTAFILDKDTPGVRIGAEIPV 218

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG  +  +  +   N       +LG++  +  P+++   +  ++ A          +   
Sbjct: 219 IG--AMPSWTVYLDNVRVGDEAVLGEVGDAFIPLQNRFGVRRIELAAHCTGMAERLIQMM 276

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I  A  R   G  L D+  ++  IAD  +++       +  A   D+           RI
Sbjct: 277 IDQANLRRTFGEPLADRQTVQNWIADSTIELEQVRLQLYYTAWKSDQGHKD------LRI 330

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A   K    +M   V   A++  GG G   E  +    R      I+ G+     L + 
Sbjct: 331 EASSLKVAATEMLTRVADRAIQLHGGLGLSRELGVEYVARMVRIWRIVEGASEIHRLSIA 390

Query: 456 NLL 458
             L
Sbjct: 391 KKL 393


>gi|90422548|ref|YP_530918.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
 gi|90104562|gb|ABD86599.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18]
          Length = 383

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 116/355 (32%), Gaps = 28/355 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           ++     G         F  +                A L   ++   +  +  +++   
Sbjct: 42  MKAMGEMGFIAPELPEVFGGLGMGSLAAGVIHEEVARADLSISYINLLASLNGQILSQHG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K W  ++ +                 I + LTE RGG+D A +  + ++  D  Y
Sbjct: 102 RPEIAKPWLTRLLAG-------------DALIAIALTEPRGGSDAANLRLRVERDGDN-Y 147

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K  +S+       ++    G    G   V  LL      G+   R  +  G R+ 
Sbjct: 148 IVNGEKTSISAADQADAAVVFGRTGTVESGAHGVTALLIPMDLPGITRSRF-DCHGQRAI 206

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
               L F N        LGD N     V            +  ++  RV+L E   +   
Sbjct: 207 GRGSLFFENVRVPGSHRLGDENKGFVQVMQGFDFSRALIGMQVLAVARVALEETWAHVAE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L     +   +AD+   + AA  L  +     D     S EAA  +  AP   
Sbjct: 267 RQAFGQPLSAFQGVSHPLADLDTQVEAARLLCLQALWLKDNGAPHSREAAMCKWWAP--- 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K+A  V+ E +   G  GY     + +  R+     +  G+   M   +  
Sbjct: 324 ----KLAYDVVHECLLTHGHGGYDRG-VMEQRLRDVLGFQLGDGTAQIMKTVIAR 373


>gi|296140718|ref|YP_003647961.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028852|gb|ADG79622.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 458

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 127/347 (36%), Gaps = 32/347 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVA 163
           LL R+   G+         +     +     A     ++  + G  +     S  A  +A
Sbjct: 133 LLERATELGITLINVPEELDGAGSDRGAVTNALVASALSYGDMGLALPILAPSGVAVTLA 192

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +    + +  K ++ E  P +            + + E     D  A++++  + + 
Sbjct: 193 QFGSDGQQQTYL-KEYAGEKVPQS-----------SVVIAEPGALFDPFALSTKATRTAG 240

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G            +  ++ F++ A+++G+   F+V     +   NG+  +     +G R+
Sbjct: 241 GYVLTGVKSMVPQAASAELFVVGAELDGKPALFIV-----ESGTNGVIIEG-DPSMGLRA 294

Query: 284 NATVELEFSNTFGFLLGDLNV-----STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
            +   L  +N        L       +T    D+  L  L  + +++   R  L     Y
Sbjct: 295 ASLGRLNLNNVKVPSSALLGEVDLDTATQNYTDVVRLARLGWSALALGTSRAVLDYVTPY 354

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + R   G  +  +  +  A+AD+A +I     L +R A+  ++  S   EAA AR    
Sbjct: 355 VKEREAFGEPIAHRQAVAFAVADMATEIDGLELLVWRGASRAEQGLSFGREAALARK--- 411

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
               +       +  + ++ +GG G+ +E  + R YR+     I  G
Sbjct: 412 ----FATDKGMRIGLDGVQLLGGHGFTKEHPVERWYRDLRGVGIAEG 454


>gi|170722217|ref|YP_001749905.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas
           putida W619]
 gi|169760220|gb|ACA73536.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619]
          Length = 387

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 128/379 (33%), Gaps = 36/379 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+ +  P   A ++     G   ++    +       A +       + A       
Sbjct: 29  RKIDEEKGFPE--AFVKAMTDAGWLSAMIPEQYGGSGLGLA-EASVILEEVNACGGNSGT 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   + +   +    +    + + PK+ S E                 +G+TE   GTD 
Sbjct: 86  VHGQMYNMFTLLRHGSEEQKRHYLPKLASGELR------------LQSMGVTEPTTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   +  D         W      SD  I+LA+       +     +   L D   
Sbjct: 134 TKIKTTAVRQGDKYVINGQKVWISRVQHSDLMILLARTTPLPEVKKKSEGMSIFLVDLRD 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 194 AIGNGLTVQPIAN-MVNH--ETNELFFDNLELPASSLIGEEGKGFRYILDGLNAERTLIA 250

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   R  + +A  YAR R V G  +     ++  IA+  ++I AA  + +R    +D
Sbjct: 251 AECIGDGRWFVEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACAEYD 310

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             ++    A  A+ +A    +             ++  GG G+  E  + R +RE+    
Sbjct: 311 SGQNAGASANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETRLYQ 363

Query: 442 I-LLGSGNAMVLDVLNLLE 459
           +  + +   +     +LLE
Sbjct: 364 VAPISTNLILSYVAEHLLE 382


>gi|315445404|ref|YP_004078283.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315263707|gb|ADU00449.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 403

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 25/279 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++  +   D  Y ++G K ++++       ++ A ++  
Sbjct: 127 GKVWAAMAITEPGFGSDSAAVSTTAKLDGDE-YVINGEKIYVTAGSRATHIVVWASLDKS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
            G   +   +      G+  +RL++K+G +++ T  + F N            D+NV  G
Sbjct: 186 KGRAAIKSFIVPREHPGVTIERLEHKLGIKASDTAAIRFDNVRIPRENLLGSPDINVEKG 245

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAI 359
                 ++   D+    V+GM V +A A     R+ ++              Q       
Sbjct: 246 FA---GVMETFDNTRPVVAGMAVGVARAALEELRKILTDAGIEISYDKPAHAQSAAAAEF 302

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  +   L+ R A   D     S+EA+  +  A        ++A  +  + +E  
Sbjct: 303 LRMEADWESGYLLTLRSAWQADNRIPNSKEASMGKAKAA-------RVASDITLKTVELA 355

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 GTTGYSEQALLEKWARDSKILDIFEGTQQIQQLVVARRL 394


>gi|49482466|ref|YP_039690.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485110|ref|YP_042331.1| putative acyl-CoA dehydrogenase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57652491|ref|YP_185112.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161145|ref|YP_492941.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194007|ref|YP_498794.1| hypothetical protein SAOUHSC_00197 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|221140769|ref|ZP_03565262.1| hypothetical protein SauraJ_03913 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|262048310|ref|ZP_06021196.1| hypothetical protein SAD30_1731 [Staphylococcus aureus D30]
 gi|262051136|ref|ZP_06023361.1| hypothetical protein SA930_0717 [Staphylococcus aureus 930918-3]
 gi|284023239|ref|ZP_06377637.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus subsp. aureus
           132]
 gi|295426768|ref|ZP_06819407.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|49240595|emb|CAG39252.1| putative acyl-CoA dehydrogenase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49243553|emb|CAG41977.1| putative acyl-CoA dehydrogenase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286677|gb|AAW38771.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127119|gb|ABD21633.1| acyl-CoA dehydrogenase FadD [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201565|gb|ABD29375.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|259161039|gb|EEW46058.1| hypothetical protein SA930_0717 [Staphylococcus aureus 930918-3]
 gi|259163620|gb|EEW48176.1| hypothetical protein SAD30_1731 [Staphylococcus aureus D30]
 gi|269939750|emb|CBI48118.1| putative acyl-CoA dehydrogenase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|283469470|emb|CAQ48681.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus ST398]
 gi|295129220|gb|EFG58847.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|298693487|gb|ADI96709.1| acyl-CoA dehydrogenase family protein [Staphylococcus aureus subsp.
           aureus ED133]
 gi|315194680|gb|EFU25069.1| hypothetical protein CGSSa00_00891 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198338|gb|EFU28668.1| hypothetical protein CGSSa01_13705 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329312922|gb|AEB87335.1| Acyl-CoA dehydrogenase FadD -like protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329731897|gb|EGG68257.1| acyl-CoA dehydrogenase, C-terminal domain protein [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 403

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|226305787|ref|YP_002765747.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229491025|ref|ZP_04384858.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|226184904|dbj|BAH33008.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|229322141|gb|EEN87929.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 401

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 105/276 (38%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+T+      D  + L+G K F+++   S   ++ A V+  
Sbjct: 125 GKVWASMAITEPSFGSDSAAVTTTAVLDGDE-WVLNGEKIFVTAGERSTHIVVWASVDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
            G   +   +      GL   RL++K+G +++ T  L   +            ++NV  G
Sbjct: 184 KGRAAIKSFVVPRDAPGLSVARLEHKLGIKASDTAVLLLQDCRIPADNILGSPEVNVEQG 243

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADI 362
               M+         A M+V   R +L E    +  A         + +Q         +
Sbjct: 244 FAGVMQTFDNTRPLVAAMAVGVGRAALEELRGILTEAGVEISYDTPVYNQHAAAAEFIRL 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  LS R A   D  K  S EA+ ++  A        +    V  +A+E  G  
Sbjct: 304 EADWEAAYLLSLRAAWMADNKKPNSLEASMSKAKAG-------RTGTDVTLKAVELAGTY 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY +   + +  R+S    I  G+     L V   L
Sbjct: 357 GYSQRPLLEKWGRDSKILDIFEGTQQIQQLIVARRL 392


>gi|58260416|ref|XP_567618.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229699|gb|AAW46101.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 204

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 16/204 (7%)

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319
            + D   +G+   + +  +G R++ T  + F +       + NV   P E  KI +   D
Sbjct: 4   FIVDADTDGIILGKKEINMGQRASDTRMVTFEDVIVP---EENVLGSPGEGFKIAMKAFD 60

Query: 320 SAI-----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
                    +V   + +L EA  YA+ RH  G  +I+   +   +AD+A+ + AA  L +
Sbjct: 61  ITRPLVSAAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVEAARGLVW 120

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A + D  +  +         A + K +  K A       ++  GG+G+  E  + + Y
Sbjct: 121 KAAWAKDCRQRNT-------FYASMAKAFAGKTAVENANLGVQVFGGAGFNTEMPMEKLY 173

Query: 435 RESPANSILLGSGNAMVLDVLNLL 458
           R++    +   +     L V   L
Sbjct: 174 RDAKIYELCEWTSQIQKLIVSKHL 197


>gi|167838955|ref|ZP_02465732.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 1285

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/421 (17%), Positives = 132/421 (31%), Gaps = 37/421 (8%)

Query: 113  DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPR 169
             GL     DR +  +     H+   A +  +A ++   A  +   +      + L   P 
Sbjct: 676  AGLLGMQIDRGYGGLGLT--HREMLALVSQLATIDTTLAFFVGLNNTLGIRPIMLDAQPA 733

Query: 170  VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCL 228
            +  +  P + +                     LTE   G++  AI S  Q+   D     
Sbjct: 734  LRDELLPLLATG-------------RTLAAFALTEPDAGSNARAIVSTAQRIDGDHWLVS 780

Query: 229  SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
                W  SS  +    + A+     G   +          GL        +G R      
Sbjct: 781  GRKSWSGSSAWAGVINVFAKQADGAGMVGLA---VRQGTPGLRIGAEDLTMGVRGMIQNT 837

Query: 289  LEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
            L            LG         +       L    + V  M+        YA RR + 
Sbjct: 838  LHLDRARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIG 897

Query: 346  GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
             G+L+D P+ ++ + D+   I   +AL  +LA  FD  +   E+         I K    
Sbjct: 898  TGLLLDHPLARQRLGDLRHRIDGLSALIEQLAADFDAGRDAPEDGLL------IAKILGS 951

Query: 406  KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
            +       E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +  
Sbjct: 952  ECLSQTSDELMQMLGGRGYIETNVAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGGDDL 1011

Query: 466  EQLFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519
                        L  +L   G++++     +            ++   +   +  A L  
Sbjct: 1012 LGYLGERTGAGALAAELRGLGEQLLEEGLANAEALGGAAHATNWVNYWLGSVAQWALLLA 1071

Query: 520  A 520
            A
Sbjct: 1072 A 1072


>gi|317507085|ref|ZP_07964847.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254628|gb|EFV13936.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 382

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 117/330 (35%), Gaps = 46/330 (13%)

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
              L        +    + +A + TP   + +                    +    + +
Sbjct: 74  WGDLGLALTFPGNGLGNAAIAAVATPEQLERF-------------------GAEWAAMAI 114

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRL 261
           TE   G+D AAIT+      D  Y ++G K F ++   +   ++ A ++   G   +   
Sbjct: 115 TEPGCGSDSAAITTTAVLDGDE-YVINGEKIFATAGARAKNVVVWASIDPAAGRAAIKSF 173

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTGPVEDMKILI 316
           +      G+   RL++K+G +++ T  + F N            ++NV  G    M+   
Sbjct: 174 VVPWGTPGMTLVRLEHKLGIKASDTAAILFDNVRVPKENLLGSPEVNVEKGFAGVMQTF- 232

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIA 367
             D+    V+G  + +A+A      R +               +Q         +  D  
Sbjct: 233 --DNTRPVVAGQALGVAKAALEE-LRSILEKEGVEISYDIPAYNQQSAAADYLALEADWE 289

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
           A   LS + A   D+  S S+E       A I K    + A A+  +A+E  G  GY ++
Sbjct: 290 AGYLLSLKAAWMTDKKLSNSKE-------ASIAKAKAGRAATAITLKAVELAGLYGYSQK 342

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNL 457
             + +  R++    I  G+     L V   
Sbjct: 343 SLLEKWARDAKITDIYEGTQQIQQLIVARR 372


>gi|328850726|gb|EGF99887.1| hypothetical protein MELLADRAFT_73307 [Melampsora larici-populina
           98AG31]
          Length = 532

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 133/404 (32%), Gaps = 35/404 (8%)

Query: 76  MANYNTPQLHAYGPGGERWDK--VEFHPAWH-ALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
              + TPQ   +   G++  +  V+     H   +R      LH        +       
Sbjct: 149 FDQHVTPQAREHELTGKKITQELVDLMGTTHVNAMRLGPGKHLHGLTLPSGLKGEDYDYF 208

Query: 133 HKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
           H++   +      A+  +  ++   V     V    +P +     P++ S          
Sbjct: 209 HELILTQEMGRTGARGFSDGMLGGMVIGLPPVLNFGSPELKSKIIPEVLSG--------- 259

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQ 248
                  I L ++E   G+D+A +     K  DG         KW  +   +D F    +
Sbjct: 260 ----KKYIALAISEAFAGSDVAGLRCTAVKTPDGKHYIVNGTKKWITNGTFADYFSTGVR 315

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVS 305
            +  +   L+ R        G+  + +K      +  T  + F N       LLG  N  
Sbjct: 316 TDKGLSMLLIERG------EGVETKPIKTSYSP-AAGTAYISFDNVKVPATNLLGVENKG 368

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
              +               +   R    E + +A +R V G  LI+QPV+++  A +   
Sbjct: 369 LQVILSNFNHERWIMCCGVIRASRFVTEECLKWAHQRKVFGKPLINQPVIRQKFAQMFAK 428

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
             A  +    +        S +E+A        + K +  ++A  V  EA++  GG G  
Sbjct: 429 CEATQSWLEHVTYQM-NKMSYAEQADLLAGQIGLLKAYSTRVAHEVADEAVQIFGGRGIS 487

Query: 426 EERS---IARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLF 465
                  +    R    +++L GS   +  L V   + K  N  
Sbjct: 488 ATGMGRFVEMFQRSYKFDAVLGGSEEILFDLGVRQAMRKMPNAV 531


>gi|329888347|ref|ZP_08266945.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328846903|gb|EGF96465.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 388

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 123/376 (32%), Gaps = 32/376 (8%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           +WD+ +  P    L+      G+     D     +       +          +    L 
Sbjct: 32  KWDREDRLP--PELILGLADLGVCGLAVDEEHGGLGVDVPALLMVVEELARRNMALAGLY 89

Query: 153 SPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
              V+ A + +  + +        P++              +  +   LGL+E   G D+
Sbjct: 90  VMCVSYAGLNLGELGSADQKARLLPRV-------------AEGRLLFALGLSEPDVGADL 136

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270
            A+ ++ ++  D I      +W   +  +D    L +          +  L+      G+
Sbjct: 137 TAVATRAERSGDKIIVNGVKRWCSGAEFADYIYALVRSGPQEDRHRNLSFLIIPRDAAGV 196

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-------LDSAIM 323
                +  +G R   T ++ F N    +   +    G  +    L         L  + M
Sbjct: 197 SMTTTET-MGVRGVPTNDVVFENVEVSVRDVMGEEAGWNQGWSQLAGPTLEVEKLQPSAM 255

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           ++      + EA  Y++ R   G  +     ++  +AD+   + A   +    A      
Sbjct: 256 AMGLGEAMVEEAWLYSQERSQFGKRICGHQAVRHTLADVQTRLRACRLMLDHAAGLVKRG 315

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +  + +         +TK +  +    +  +    +G  GY +  ++ R+ R++    I 
Sbjct: 316 EPSAVQ-------TSMTKLFIAETVRGIALDCQTVMGAYGYAQGFAMERYVRDALVLPIF 368

Query: 444 LGSGNAMVLDVLNLLE 459
            GS      ++ NL+ 
Sbjct: 369 GGSSAIQRSNIANLMR 384


>gi|21281938|ref|NP_645024.1| hypothetical protein MW0209 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|300911259|ref|ZP_07128708.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
 gi|21203373|dbj|BAB94074.1| MW0209 [Staphylococcus aureus subsp. aureus MW2]
 gi|300887438|gb|EFK82634.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 403

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|118463616|ref|YP_880260.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118164903|gb|ABK65800.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 642

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/430 (17%), Positives = 142/430 (33%), Gaps = 54/430 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
             +R     G         F  +   Q    RA  +        G L+S   S+     +
Sbjct: 85  EYVRGLADLGCFGMKIPSEFGGLNMSQVAYNRALMMISSVHPSLGALLSAHQSIGVPEPL 144

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  TP   + + P+  +                     LTE   G+D A + S    + 
Sbjct: 145 KLAGTPEQKRKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPVD 190

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 191 DGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFM 250

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLA 333
           G R                    N+     + +KI L  L++  +S+        + +L 
Sbjct: 251 GLRGIENGVTRLHRVRVPS---ENLVGREGDGLKIALTTLNAGRLSIPASATGSAKWALK 307

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  L +   + R ++ IA  + A  A+    A   DE ++        
Sbjct: 308 IAREWSGERVQWGKPLAEHEAVARKLSFIAATVYALDAVLELSAQMADEGRNDIR----- 362

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSIL 443
            I A + K W  +MA  +  E M+  GG GY   E           + +  R+   N I 
Sbjct: 363 -IEAALAKLWSSEMACVIADEVMQIRGGRGYETAESLAARGERAVPVEQVLRDLRINRIF 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+   M L +            +         G   K    +   + +        A++
Sbjct: 422 EGASEIMRLLIAR----------EAVDAHLAAAGDLAKPDAGLREKAAAAVGASGFYAKW 471

Query: 504 LTEKIALASS 513
           L + +     
Sbjct: 472 LPQLVFGEGQ 481


>gi|189195774|ref|XP_001934225.1| acyl-CoA dehydrogenase fadE12 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980104|gb|EDU46730.1| acyl-CoA dehydrogenase fadE12 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 411

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 115/354 (32%), Gaps = 29/354 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            H  L    W     P     +    +    +M  +           +       T P  
Sbjct: 42  FHSALAAGGWLGIALPTCYGGSGLGISEATMMMQTISESGAGMAGAQAVHGNVYATQP-- 99

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S E   +    + K  V +  G+TE   G D   + ++  +  D       
Sbjct: 100 ----LVRHGSAEMCESLVPRIVKGEVRVCFGVTEPGSGLDTLGLRTRAVREGDEYVISGE 155

Query: 231 HKWFLSSPMSDAFIMLAQVE---------------GRVGCFLVPRLLE--DGSPNGLCYQ 273
             W  ++ ++   ++LA+                 G+     +  L    D +   L  +
Sbjct: 156 KVWITAAQVAGVMMLLARTGDGDSDGGKSIGKDDGGKKRSHGLSLLCIPLDRANPALEIR 215

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
           R+  K+G R+    ++ F         L+G  N     +           A  ++     
Sbjct: 216 RI-RKMGGRAVDANQVFFDKYRVPASSLIGAENHGFKIILQGMNAERCLLAGEALGLGYC 274

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR--SE 388
           +L+ A  YAR R V    +     +   +AD  + + AA   ++  A  +DE++    + 
Sbjct: 275 ALSRAAEYARTREVFNRPIGMNQGIAHPLADAYMALEAAKLATYHAAQLYDESQQEGSTV 334

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                 + A   KY   + A      A+   GG GY EE  + R +RES    I
Sbjct: 335 THDEVGVAANSAKYLAAEAAFRACERAVLTHGGMGYAEEYDVERWFRESLVPRI 388


>gi|297191733|ref|ZP_06909131.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721412|gb|EDY65320.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 652

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 123/385 (31%), Gaps = 44/385 (11%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G R ++    P    ++      G      +  +  +   Q +  +A  L   A    G 
Sbjct: 84  GARIEREARIPD--EVINGLRELGALGMKIEPKYGGLGLTQVYYNKALALVGSANPAIGA 141

Query: 151 LMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           L+S   S+     +    T    + + P++ S +                   LTE   G
Sbjct: 142 LLSAHQSIGVPQPLKQFGTEEQKQKFLPRLASTD--------------ISAFLLTEPDVG 187

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSP 267
           +D A + +      D         W  +  ++D  +++A+V    G    +   + +   
Sbjct: 188 SDPARLATTAVPDGDHYVLDGVKLWTTNGVVADLLVVMARVPKSEGHKGGITAFVVEADS 247

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMS-- 324
            G+  +   + +G R        F           N        +KI L  L++  +S  
Sbjct: 248 EGITVENRNSFMGLRGLENGVTRFHQVRVPA---ENRIGPEGAGLKIALTTLNTGRLSLP 304

Query: 325 ---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              V   +  L  A  ++  R   G  +     +   I+ IA    A  A+    +   D
Sbjct: 305 AMCVGAGKWCLKIAREWSAVREQWGKPVAKHEAVGAKISFIAATTFALEAVVDLASQMAD 364

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIA 431
           E ++         I A + K +  +M   +  E ++  GG G+   E             
Sbjct: 365 EDRNDIR------IEAALAKLYGSEMGCLMADELVQIRGGRGFETAESLAARGERAVPAE 418

Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456
           +  R+   N I  GS   M L +  
Sbjct: 419 QLLRDLRINRIFEGSTEIMHLLIAR 443


>gi|238490124|ref|XP_002376299.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
 gi|220696712|gb|EED53053.1| acyl-CoA dehydrogenase family protein [Aspergillus flavus NRRL3357]
          Length = 444

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 123/442 (27%), Gaps = 49/442 (11%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE---FHPAWHA 105
           + P  +   L+ L +++ S          N    +   +     R D  +       W  
Sbjct: 4   DLPPPLVAHLDSLDQFIHSTILPLQHSEDNN---RFFDHRREYARTDWAKDGLPSQEWEE 60

Query: 106 LLRRSI----HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ-------------LEA 148
           LL ++       G       + +        +   +A  + MA              L+ 
Sbjct: 61  LLGKARRLADEAGFFRFALPKIYGGQGHPDTNLWMSATRFHMASNPVYGGGLGLANDLQN 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            H +  +     M+    T        P                +       GLTE   G
Sbjct: 121 EHSVIGNFPDILMLHHFGTAEQKLTLIP-------------ARLRGDFRTTFGLTEPDHG 167

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSP 267
           +D   +++   ++  G       KW   +      I  A+  G+ G    +   L     
Sbjct: 168 SDATFMSTTATRVRGGFEINGAKKWQTGAHHCTHMIFFARTSGQDGSAKGITAFLIPRET 227

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMS 324
            G+     +    N       +  +  +      L          +       +  A  S
Sbjct: 228 EGVEIASYEWTF-NMPTDHATVTLNGVWVPESAVLGTVDQGLAIAQTFVHENRIRQAASS 286

Query: 325 VSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +  L  AI  AR R V G    L D   ++  + ++   +     L  + +   D 
Sbjct: 287 CGAAKFCLERAIERARSRTVWGEGKKLADHQAVQFPVVELMTQVEMLRLLILKTSWEMDR 346

Query: 383 AKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
             + S++ A+            +  +W  ++       A++  GG GY         YR 
Sbjct: 347 VVAESQDKAWIAIERRLSDKVAMCNFWANRLCCQAADRAIQIHGGDGYSRHYPFEHIYRH 406

Query: 437 SPANSILLGSGNAMVLDVLNLL 458
                I  G+    +  +   L
Sbjct: 407 FRRYRITEGAEEIQMRKIAAYL 428


>gi|134101549|ref|YP_001107210.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008169|ref|ZP_06566142.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914172|emb|CAM04285.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 394

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 127/380 (33%), Gaps = 39/380 (10%)

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           R D+      W    RRS   G +                H +   +    A+  A    
Sbjct: 44  RVDRATLRQVW----RRSRELGFYGINLPPELGGHGLAH-HDLCVLKEEAAARGSALFPN 98

Query: 153 SPSVTSAS----MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                       +     TP   + +               P+ +   A    LTE   G
Sbjct: 99  VLGDMGGPLRVGVALNAATPEQLERY-------------FLPVVRGERACCFSLTEPGAG 145

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +DI  +T+  ++  DG Y L+G K F S+ P +D  I++A+       +     + D   
Sbjct: 146 SDIRRMTTTARRDGDG-YRLTGRKVFSSAAPFADFAIVVARHRDEGETY--SAFIVDFDA 202

Query: 268 NGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
            G      +  + G       ++   + F     +LG L            +  L     
Sbjct: 203 AGCTALDGETPMSGQH--IEGDVLLEDCFVPATNVLGPLGKGLQVGVGRINMNRLLHCPT 260

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +   R +L  ++ YAR R V GG +I+   ++  +A ++ D+ AA A+    A   D  
Sbjct: 261 MIGLARRALQLSLDYARYRTVFGGPMIELQAIQHHLAQMSTDLHAARAMVLGTAAQADRG 320

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
           +    EA          K +  + A  V   A++  G +G  +   + + +R      I+
Sbjct: 321 EPVVVEANM-------CKLFTAEAAFRVADLAVQIHGKTGVTQGHEVEQIFRALRMFRIV 373

Query: 444 LGSGNAMVLDVLNLLEKGTN 463
            G+       +   L  G  
Sbjct: 374 TGTTEIHKNAIAKGLAAGAA 393


>gi|107028398|ref|YP_625493.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116686394|ref|YP_839641.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105897562|gb|ABF80520.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116652109|gb|ABK12748.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 617

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 93/530 (17%), Positives = 177/530 (33%), Gaps = 89/530 (16%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D   +A    + +     ++ L E      A +L R    A+     L   G    
Sbjct: 19  LFEADKRFLAEHGLYGTHDRASIDALLERA-RDFALDLGRSYQQADVEGCTLLDDG---- 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGH 150
              +V     +HAL  R   +      W  +           +      +++ A      
Sbjct: 74  ---QVRIPSHFHALWARFRDE------WSNTLFGTAHGLPPIVTQMIYEMFMGANPSFMT 124

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +  ++ +  TP                    AP++          TE + GTD
Sbjct: 125 YGGFTRPAVKLLQMHGTPHQKA--------------LIAPLEAYRWDACFCATEPQAGTD 170

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           + A+  +   +   IY + G K ++S+ M +      + +L +++        + C +VP
Sbjct: 171 LTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLYFVLGRIDTASPDSFSLSCLVVP 230

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVE 310
           R   D       PN +    L  K+G +  A   L F +   T G+LLG   NV    + 
Sbjct: 231 RFWPDEETGELQPNHVDCIGLPRKMGLKGCANTHLVFGSNGTTKGWLLGGRRNVGLLQLM 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKR 357
            +     + + +  V     +   A+ YA RR   G  +             ++   ++R
Sbjct: 291 PLMNQARMSTGMFGVGVASSAYLHAVEYAGRRLQ-GRPIERASNTHAARVAIVEHADVQR 349

Query: 358 AIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWCCK 406
            + D+   +     L  +LA      +  EA   ++ A   R       + PI K +   
Sbjct: 350 MLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFISD 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTN 463
            A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + + 
Sbjct: 410 QAWRICETAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRHSR 469

Query: 464 LFEQLFSTLEQDLGSSGKK-VITILRDSISLCKEDKGLARFLTEKIALAS 512
           L +     L+  L           LR             R   ++IA A 
Sbjct: 470 LIQYYRDELDAFLAQQHHAGTHAELRPLFDAL-------RVGADRIAAAL 512


>gi|146339584|ref|YP_001204632.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192390|emb|CAL76395.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278]
          Length = 424

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 127/440 (28%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    L A +      +  E++ L        A +  R  ++           G     
Sbjct: 3   FSLPKELTAYLDELDRFIDAEIKPL------EEADDNIRFFDHRREWARTDFENGGLPRH 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY------LMAQL 146
            W+++           R+   G       + +                +      L   L
Sbjct: 57  EWEQLL-----RKAKDRADAAGHLRFAIPKRYGGKDGSNLWMAVIREHFASKGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  ++   +M+               +                   I  GLTE  
Sbjct: 112 QNEHSIVGNLPIVTMLDRYGRDDQKA-----MIDG---------SITGKYRITFGLTEPH 157

Query: 207 GGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++    +      + ++G K + +         + A+  G  G    +   
Sbjct: 158 HGSDATHMETKAVPATRDNVKGWLINGEKMWTTGMHVATHCALFARTSGNDGDARGITCF 217

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F++ F     L G++       +       +
Sbjct: 218 LVPAKSEGVKVEEYLWTF-NMPTDHPRVSFTDVFVPEDALFGEVGRGLSLAQCFVHENRI 276

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E+++YAR R   G  L +   ++  + ++A        L  + A 
Sbjct: 277 RQAASSLGAAVFCINESVNYARERKPFGKALAENQAIQWPLVELATQAEMLRLLIRKTAW 336

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 337 EMDQLTQAQVEHTLSDK-VSMCNYWANRLCCEAADRAIQVHGGMGYSRHKPFEHIYRHHR 395

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 396 RYRITEGSEEIQMRKVAGFL 415


>gi|315047867|ref|XP_003173308.1| acyl-CoA dehydrogenase fadE12 [Arthroderma gypseum CBS 118893]
 gi|311341275|gb|EFR00478.1| acyl-CoA dehydrogenase fadE12 [Arthroderma gypseum CBS 118893]
          Length = 402

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 126/374 (33%), Gaps = 39/374 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM---- 143
                  D+ E +P  H L      DG                    I  A + L     
Sbjct: 26  DEYWAEHDRTEEYP--HELHAALSKDGWIGIALPEDLGGAGL----GISEATMMLQTISQ 79

Query: 144 --AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
             A L     +  +V +   VA   +    K   P++ + E+                 G
Sbjct: 80  SGAGLAGAQSIHANVYATQPVAKFASEEQRKRMLPRLIAGEWR-------------ACFG 126

Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK---WFLSSPMSDAFIMLAQVEG----RVG 254
           +TE   G +   + +   K  D            W  S+ ++   I+LA+       +  
Sbjct: 127 VTEPNTGLETLKLRTVAVKDGDSYRVSGQKMQYSWISSAQVAQKMILLARTTPIEEVKKP 186

Query: 255 CFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPV 309
              +     D   S  GL  +++K K+G RS    E+ F +       L+G+       V
Sbjct: 187 SEGLSLFFIDFDKSAAGLDLRKIK-KMGGRSVDANEVFFDDYRIPADSLIGEEGEGFKIV 245

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369
                      A  ++    V+L +A  YA+ R V G  +     +   +A   +++ AA
Sbjct: 246 LHGMNAERCLLAGEALGLGYVALEKAAKYAQERVVFGRPIGQNQGIAHPLAAAYMNLEAA 305

Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
              ++     +DE+++ +        +     KY   + A A    A+  +GG GY +E 
Sbjct: 306 KLATYHATRLYDESRNGASITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGMGYAQEY 365

Query: 429 SIARHYRESPANSI 442
            + R+ RE     I
Sbjct: 366 HVERYLRECFVPRI 379


>gi|182435356|ref|YP_001823075.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463872|dbj|BAG18392.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 405

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 115/365 (31%), Gaps = 17/365 (4%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL---YLMAQLEAGHLMSPSVTS 158
           AW   LR      L     +     V R     +    L    L +      L+  S+  
Sbjct: 12  AWCEELRTLAAQELRPLAEEGEPGRVNRPLLAALGELGLLGRMLASGALDLCLLRESLAR 71

Query: 159 ASMVALMTTPRVHKDWAPKIFSRE--YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
               A            P + S    +       ++         L+E   G+D AA++ 
Sbjct: 72  GCTEAETALALQGLGTTPIVRSGTAAHRERWLPEVRAGRAVAAFALSEPGAGSDAAALSL 131

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  +DG        W  ++P +D  ++ A+     G   +   L      GL      
Sbjct: 132 AAEHTADGWRLTGEKCWISNAPEADVAVVFARTTPGAGSRGITAFLVPSDRPGLT-GSAL 190

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           + +      T  LEF         +LG+ +       +   L        +V   R +L 
Sbjct: 191 DMLSPHPIGT--LEFDGVPVTADDVLGEPDRGFRVAMNTLNLFRPSVGAFAVGMARAALD 248

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + +   R   GG L D   +   +A++A    AA  L +  A ++D  +      +  
Sbjct: 249 ATLDHTAHRTAFGGPLSDLQAVSHQVAEMATRTEAARLLVYAAAAAYDAGE------SGV 302

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K +  + A  V+  A++  G         +   YRE  A  I  G+       
Sbjct: 303 PRRAAMAKLYATETAQYVVDAAVQLHGARALRRGHLLEHLYREVRAPRIYEGASEVQRTI 362

Query: 454 VLNLL 458
           +   L
Sbjct: 363 IAKEL 367


>gi|167565173|ref|ZP_02358089.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis EO147]
          Length = 1282

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 86/460 (18%), Positives = 148/460 (32%), Gaps = 40/460 (8%)

Query: 63   EYVLSCTAQELARMANYNTPQLHAYGPG---GERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            E      A   A         L  Y          D+    P    L     ++GL    
Sbjct: 624  EADAGGAASPTASKVEQMKDWLRHYARTRIDSRTIDERRTIPPHVVLD--FGNEGLLGMQ 681

Query: 120  WDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             +R++  +       +   ++L  +    A  +   +      + L   P +  +  P +
Sbjct: 682  INRAYGGLGFAHREMLEVVSQLAAIDSTLAFFVGLNNTLGIRPIMLHAQPALRDELLPLL 741

Query: 179  FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSS 237
             +                     LTE   G+++ AI S  Q+   D         W  SS
Sbjct: 742  ATG-------------RTLAAFALTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSS 788

Query: 238  PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG- 296
              +    + A+     G   +          GL        +G R      L        
Sbjct: 789  AWAGVINVFAKQADGTGMIGLA---VRQGTPGLRIGAEDLTMGVRGMIQNTLHLDRARVS 845

Query: 297  --FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                LG L       +       L    + V GM+        Y  RR +  G+L+D P+
Sbjct: 846  DACRLGALGQGMAVAQQTMNFARLGIGAVCVGGMKRCAQLMHRYGARRQIGTGLLLDNPL 905

Query: 355  MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             ++ + D+   I    AL  +LA  FD  +   E+         I K    +       E
Sbjct: 906  SRQRLGDLRHRIDGLNALIEQLAADFDAGRDAPEDGLL------IAKILGSEFLSQSSDE 959

Query: 415  AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
             M+ +GG GYIE     + +R++    I  G    ++  + + L  G++    L   L++
Sbjct: 960  LMQMLGGRGYIETNLAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGSD---DLLGYLDE 1016

Query: 475  DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
              G+    +   LR+      ED GLA    E++  A+ A
Sbjct: 1017 RTGAV--ALAAELRELGEQLLED-GLAN--AEQLGGAAHA 1051


>gi|170735003|ref|YP_001774117.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169821041|gb|ACA95622.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 617

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 90/522 (17%), Positives = 176/522 (33%), Gaps = 85/522 (16%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D   +A    + +     ++ L E      A +L R    A+     L   G    
Sbjct: 19  LFEADKRFLAEHGLYGTHDRASIDALLERA-RDFALDLGRSYQQADIEGCTLLDDG---- 73

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGH 150
              +V     +HAL  R   +      W  +           +      +++ A      
Sbjct: 74  ---QVRIPSHFHALWARFRDE------WSNTLFGTAHGLPPIVTQMIYEMFMGANPSFMT 124

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +  ++ +  TP                    AP++          TE + GTD
Sbjct: 125 YGGFTRPAVKLLQMHGTPHQKA--------------LIAPLEAYRWDACFCATEPQAGTD 170

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           + A+  +   +   IY + G K ++S+ M +      + +L +++        + C +VP
Sbjct: 171 LTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLYFVLGRIDTASPDSFSLSCLVVP 230

Query: 260 RLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVE 310
           R   D       PN +    L  K+G +  A   L F +   T G+LLG   NV    + 
Sbjct: 231 RFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFGSNGTTKGWLLGGRRNVGLLQLM 290

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKR 357
            +     + + +  V     +   A+ YA RR   G  +             ++   ++R
Sbjct: 291 PLMNQARMSTGMFGVGVASSAYLHAVEYAGRRLQ-GRPIERASNTHAARVAIVEHADVQR 349

Query: 358 AIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWCCK 406
            + D+   +     L  +LA      +  EA   ++ A   R       + PI K +   
Sbjct: 350 MLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFISD 409

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTN 463
            A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + + 
Sbjct: 410 QAWRICETAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRHSR 469

Query: 464 LFEQLFSTLEQDLGSSGKK----VITILRDSISLCKEDKGLA 501
           L +     L+  L           +  L D++    +    A
Sbjct: 470 LIQYYRDELDAFLAQQHHAGTHSELRPLFDALRAGADRIAAA 511


>gi|73537350|ref|YP_297717.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
 gi|72120687|gb|AAZ62873.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region [Ralstonia eutropha JMP134]
          Length = 426

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/430 (15%), Positives = 128/430 (29%), Gaps = 39/430 (9%)

Query: 50  FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD---KVEFHPAWHAL 106
            P+ +   LE L  ++ +  A   A   N    +   +     R D   +    P W AL
Sbjct: 5   LPAELVAYLEELDRFIEAEIAPLQAENDNQ---RFFDHRREWARTDFDNQGLPRPEWEAL 61

Query: 107 LRRSIHD----GLHCSIWDRSFEPVVRKQAHKI------RAARLYLMAQLEAGHLMSPSV 156
           L  +       G         +                  A  L L   L+  H +  + 
Sbjct: 62  LAEARRRADRAGHLRFALPPEYGGKGGGNLWMAVIREHLAAKGLGLHNDLQNEHSIVGNK 121

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
               ++    T      + P +                +V +  GLTE   G+D   + +
Sbjct: 122 PFVLVMRDYGTDAQKAFFIPGMLDE-------------TVKLAFGLTEPEHGSDATHMAT 168

Query: 217 QG---QKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-CFLVPRLLEDGSPNGLC 271
           +    ++     + + G K + +   +    ++ A+  G  G    +   L      G+ 
Sbjct: 169 RAIPEKRDGKEGWRIDGEKMWTTGMHTATHCVVFARTSGEDGDARGITAFLVPSDTAGVR 228

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---YLDSAIMSVSGM 328
            +       N       + F+  +      L  +   +   +  +    +  A  S+   
Sbjct: 229 VEEYLWTF-NMPTDHPRVSFTGVWVPADAVLAKAGSGLSVAQHFVHENRIRQAAASLGAA 287

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
              + E++ YAR R   G  L     ++  + ++A       A   + A   D    + E
Sbjct: 288 EYCIRESVRYARERKPFGQELARNQGIQFPLVELATRAQMLRAFIRQTAWEMDR-IPKKE 346

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                     +  Y   ++       AM+  GG GY   +     YR      I  GS  
Sbjct: 347 VEKQLSDKVSMCNYTANRLCCEAADLAMQVHGGIGYSRHKPFEHIYRHHRRYRITEGSDE 406

Query: 449 AMVLDVLNLL 458
             +  V   L
Sbjct: 407 IQMRKVAAYL 416


>gi|198436094|ref|XP_002122131.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
           11 [Ciona intestinalis]
          Length = 761

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 118/362 (32%), Gaps = 35/362 (9%)

Query: 109 RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP 168
           ++   GL                AH         M   EA +  +P   +  ++ +  + 
Sbjct: 411 KAKQQGLWNLFLPDVSGLSNVDYAHIAEQLGKSHMNS-EALNCSAPDTGNMEVLHMYGSD 469

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYC 227
              + W               P+    +     +TE +   +D   + +   +  +  Y 
Sbjct: 470 YQKQKWL-------------QPLLDGKIRSAFCMTEPQVASSDATNMETTITRDGN-SYV 515

Query: 228 LSGHKWFLSSPMSDAF---IMLAQVEGRVGCFLVP--RLLEDGSPNGLCYQRLKNKIGN- 281
           ++G KW+ +   +      I++ +  G           ++      G+   R     G  
Sbjct: 516 VNGRKWWSTGAANARCTFGIVMGRTGGLNTHKHKSHSMIVVPFDTPGVTRVRNLTVFGYD 575

Query: 282 -RSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
              +   E+ F N    L              +       +   + S+      L+  + 
Sbjct: 576 EAPSGHSEMLFENVRVPLENLILGEGRGFEIAQGRLGPGRIHHCMRSIGLAERCLSLLVE 635

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI 395
              +R   G  +++  V++  IA   + I     L+   A+  D+  +K   +E A  ++
Sbjct: 636 RGMQRRPFGKRIVEHEVVQHKIAQCRIAIDQCRLLTLHAAHMMDQFGSKRARKEIAMIKV 695

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            AP       KM   VI EA++  GG+G  ++  +A+ Y  +    I  G     +  + 
Sbjct: 696 AAP-------KMLCQVIDEAIQVYGGAGVSDDFPLAKCYAMARTLRIADGPDEVHLSSIG 748

Query: 456 NL 457
            L
Sbjct: 749 KL 750


>gi|329732505|gb|EGG68855.1| acyl-CoA dehydrogenase, C-terminal domain protein [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 403

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|229488802|ref|ZP_04382668.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229324306|gb|EEN90061.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
          Length = 403

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 127/362 (35%), Gaps = 41/362 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +   +   G+        +         +A     A   L     A ++ +P   +  M
Sbjct: 48  EMQSAAKEAGVFAPHAPIEYGGHGLNMSDRAPVFEEAGYSLFGP-TALNIAAPDEGNVHM 106

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +A +      + +              AP+    +     +TE     G+D +A+ ++ +
Sbjct: 107 LAHVANEAQKQQFL-------------APLASGDMRSAFAMTEPAPGAGSDPSALNTRAE 153

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKN 277
           K+  G + ++G KWF++    +  FI++A+  G  G        L      GL   R  +
Sbjct: 154 KVPGG-WKINGKKWFITGADGAGFFIIMARTSGEPGQRGGATMFLAPTDTPGLVVGRHID 212

Query: 278 -----KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                 IG       E+ F + F     +LG+++      +       +   +  +   R
Sbjct: 213 TLDKAMIGGH----CEVTFEDLFVPDEAVLGEVDQGFAYAQVRLGPARMTHVMRWLGAAR 268

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+     R   G  L D  ++++ +AD  +DIAA+ AL  +     D+       
Sbjct: 269 RGHDVAVARVAEREGFGSKLGDLGMIQKMVADNEIDIAASRALLVQACFELDQG------ 322

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             +A     I K +  +    ++  +++  GG G   +  +AR  RE     +  G    
Sbjct: 323 -GHASNATSIAKTYAAEAIFRIVDRSIQMCGGMGVSGDLPLARLSREVRPFRVYDGPSEV 381

Query: 450 MV 451
             
Sbjct: 382 HR 383


>gi|170749259|ref|YP_001755519.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655781|gb|ACB24836.1| acyl-CoA dehydrogenase domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 382

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 119/363 (32%), Gaps = 45/363 (12%)

Query: 101 PAWHALLRRSI----------HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           P W AL R               G    +   ++       +           A    G 
Sbjct: 21  PYWRALDREMAYPTAFVNALTESGYLSVLIPEAYGGSGLPLSAAAAILEEVQRAGCN-GG 79

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
                + +   +    +     ++ P I                      G+TE   GTD
Sbjct: 80  ACHAQMYTMGTLLRHGSEAQKAEYLPAIAEGRLR------------LQAFGVTEPTSGTD 127

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDG 265
             ++ +  +   D  Y ++G K + S +  SD  ++LA+     EG      +  LL D 
Sbjct: 128 TGSLKTTARLEGDH-YVVNGQKIWTSRAEHSDLMLLLARTTPKAEGMKRTDGLSVLLVDM 186

Query: 266 SP---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLD 319
                NGL  + ++  + N +  T E+ F N       L+G+       +        + 
Sbjct: 187 RAAKGNGLTIRPIRTMM-NHA--TTEVFFDNLRVPAQNLIGEEGRGFRYILSGMNAERIL 243

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
            A   V   +  +  A  YA  R V G  +     ++  IA    ++ AA  +       
Sbjct: 244 IAAECVGDAKWFIDRARAYAGERSVFGRPIGANQGVQFPIAKAYANMRAAELMVREALTL 303

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439
           ++   +   EA  A+++A          +       ++  GG G+ EE  + R +RE+  
Sbjct: 304 YEGGANPGAEANMAKMLAA-------DASFEAANACIQTHGGFGFAEEYDVERKFRETRL 356

Query: 440 NSI 442
             +
Sbjct: 357 YQV 359


>gi|281202024|gb|EFA76229.1| glutaryl-CoA dehydrogenase [Polysphondylium pallidum PN500]
          Length = 388

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 116/358 (32%), Gaps = 58/358 (16%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            A++      G+  S     F  V     + + A  +  +       +   S      + 
Sbjct: 80  RAIMNEFGSMGMLGSTIPE-FGGVSHVG-YGLMANEVEKVDSGYRSAMSVQSSLVMHPIY 137

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-S 222
              T      +   +              K  +    GLTE   G+D A + ++ +K+  
Sbjct: 138 TFGTDAQKSKYLEGL-------------SKGELVGCFGLTEPNAGSDPAGMQTRARKVAG 184

Query: 223 DGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            G Y L+G K W  +SP++D F++ A+V+ G +  F++     +    GL   +L+ K+ 
Sbjct: 185 QGKYILNGTKTWITNSPIADVFVVWAKVDNGDIRGFVL-----EKGMKGLSAPKLEGKLS 239

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            R++ T  +   +             G          L+ A   +    +  AE  +   
Sbjct: 240 LRASITGMIVMEDVEVPESAMFPEVKGLR---GPFSCLNKARYGIGWGALGAAEYCYATA 296

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
           R++                               ++    D     SE          + 
Sbjct: 297 RQY-------------------------GLDPCHQVGTLIDAGIGHSER-------ISLI 324

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           K   C  +  +  +A + +GG+G  +E  + RH       +   G+ +   L +   +
Sbjct: 325 KRNSCGKSLDIARQARDMLGGNGIADEYHVIRHAANLETVNTYEGTHDIHALILGRAI 382


>gi|167572276|ref|ZP_02365150.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis C6786]
          Length = 1282

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 87/460 (18%), Positives = 147/460 (31%), Gaps = 40/460 (8%)

Query: 63   EYVLSCTAQELARMANYNTPQLHAYGPG---GERWDKVEFHPAWHALLRRSIHDGLHCSI 119
            E      A   A         L  Y          D+    P    L     ++GL    
Sbjct: 624  EADAGGAASPNASKVEQMKDWLRHYARTRIDSRTIDERRTIPPHVVLD--FGNEGLLGMQ 681

Query: 120  WDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178
             DR++  +       +   ++L  +    A  +   +      + L   P +  +  P +
Sbjct: 682  IDRAYGGLGFAHREMLEVVSQLAAIDSTLAFFVGLNNTLGIRPIMLHAQPALRDELLPLL 741

Query: 179  FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-ISDGIYCLSGHKWFLSS 237
             +                     LTE   G+++ AI S  Q+   D         W  SS
Sbjct: 742  ATG-------------RTLAAFALTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSS 788

Query: 238  PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG- 296
              +    + A+     G   +          GL        +G R      L        
Sbjct: 789  AWAGVINVFAKQADGAGMIGLA---VRQGTPGLRIGAEDLTMGVRGMIQNALHLDRARVS 845

Query: 297  --FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354
                LG L       +       L    + V GM+        Y  RR +  G+L+D P+
Sbjct: 846  DACRLGALGQGMAVAQQTMNFARLGIGAVCVGGMKRCAQLMHRYGARRQIGTGLLLDNPL 905

Query: 355  MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414
             ++ + D+   I    AL  +LA  FD  +   E+         I K    +       E
Sbjct: 906  SRQRLGDLRHRIDGLNALIEQLAADFDAGRDAPEDGLL------IAKILGSEFLSQSSDE 959

Query: 415  AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474
             M+ +GG GYIE     + +R++    I  G    ++  + + L  G++    L   L +
Sbjct: 960  LMQMLGGRGYIETNLAPQIFRDARLPRIFEGPTETLLAHLGSRLLNGSD---DLLGYLGE 1016

Query: 475  DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514
              G+    +   LR+      ED GLA    E++  A+ A
Sbjct: 1017 RTGAV--ALAAELRELGEQLLED-GLAN--AEQLGGAAHA 1051


>gi|295396987|ref|ZP_06807105.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
 gi|294974768|gb|EFG50477.1| possible acyl-CoA oxidase [Aerococcus viridans ATCC 11563]
          Length = 400

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 128/387 (33%), Gaps = 38/387 (9%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137
           +   P L  +      W K E  P      +     GL              K +     
Sbjct: 39  DQIAPTLKQH------W-KEETFP--FEAFKAVGDLGLMNHPDLFKESQHPYKVSEYFNL 89

Query: 138 ARLYLMAQLEAGHLMSPSVTSA---SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
            R Y +A+ +       +V +    + +    +      +APK  S E+           
Sbjct: 90  FRYYELARTDMSLATFMTVHAGLGFTTLLQGGSQEQIDYFAPKFTSFEWQ---------- 139

Query: 195 SVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253
                  LTE   G+DIA  + +   +  D        +W   +  +D     A+     
Sbjct: 140 ---TCFALTEPDHGSDIAGGMATTAVRDGDNWLLNGEKRWIGGAGSADFIPTFAR---NP 193

Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
               +   +   +  GL  +++  KI  R      +   N        L       +  +
Sbjct: 194 ENNDILCFMVSTATEGLTVEKIDGKIALRLVQNGHIHLKNVQVAEAFRLPKIQSFRDVSR 253

Query: 314 IL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
           IL     D + ++  G   +L  A+ Y  +R   G  +    + +  +A +  + A   +
Sbjct: 254 ILYATRADVSHITAGGHAGALRAALKYTGQREQFGKKVSQFQITQEKLARMQANAATGLS 313

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           LS+RLA    E K       YA + A I K    ++    +A   E  GG+G   +  +A
Sbjct: 314 LSYRLAELQTEGK-------YAEVPASIAKMQNARLLRETVALGREICGGNGITVDTEVA 366

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
           R++ ++ A     G+     L +   L
Sbjct: 367 RYFGDAEAIYSYEGTHEVNSLIIGRYL 393


>gi|127513788|ref|YP_001094985.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella
           loihica PV-4]
 gi|126639083|gb|ABO24726.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4]
          Length = 432

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 138/404 (34%), Gaps = 39/404 (9%)

Query: 91  GERWDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL--- 146
           G+RW+     PA    L  ++   GL      + +        +   A    +M ++   
Sbjct: 50  GDRWE----SPAILAELKAKAKDAGLWNLFLPQVYGEFSPGLTNLEYAPLAEIMGRVYWA 105

Query: 147 -EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
            E  +  +P   +  ++A        + W   + + E                   +TE 
Sbjct: 106 SEVFNCSAPDTGNMEVLARYGNKEQQERWLQPLLNGEIR-------------SAFSMTEP 152

Query: 206 R-GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA---FIMLAQVEGRVGCFLV--P 259
               +D   + +   +  D  Y ++G KW++S   ++     I++ + +       +   
Sbjct: 153 DVASSDATNVETSIVRDGDE-YVINGRKWYISGACNNHTQIHIVMGKTDPDNSNKYIQQS 211

Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNA--TVELEFSNTFGFLLGD---LNVSTGPVEDMKI 314
            +L   +  G+   R     G         E+ + N    +              +    
Sbjct: 212 MILVPANTPGVKVVRPMKVFGYDDAPEGHAEVIYDNVRVPVSNMLLGEGRGFEIAQGRLG 271

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              +   + +V   + +L +    A  R   G  L  Q  ++ AIA  A ++  A  L+ 
Sbjct: 272 PGRIHHCMRTVGLAQRALEQMCERAETRIAFGKPLSKQQSVREAIAKSACEVEQARLLTL 331

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
           + A   D+  +++     A+ +  + K     M  AVI  A++  GG G  ++  +A+ Y
Sbjct: 332 KAAAKMDQGGNKA-----AKDLIAMIKIVAPNMGCAVIDRAIQLHGGGGLSQDFFLAKAY 386

Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478
             + +  +  G     ++ +   L +  +          + +G+
Sbjct: 387 TITRSIRLADGPDQVHMMQLGRNLARDVHAQNLAAQHPAKPVGA 430


>gi|294631987|ref|ZP_06710547.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
 gi|292835320|gb|EFF93669.1| acyl-CoA dehydrogenase [Streptomyces sp. e14]
          Length = 386

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 100/327 (30%), Gaps = 32/327 (9%)

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
                EA   ++     A  V    TP +   W P              +   S      
Sbjct: 70  AHGCTEAETALALQGLGAHPVHAHGTPALRARWLP-------------AVADGSAVAAFA 116

Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-------CLSGHKWFLSSPMSDAFIMLAQVEGRVG 254
           L+E+  G+D AA+T +                      W  ++P +D + + A+     G
Sbjct: 117 LSERAAGSDAAALTLRADPDPSAGGGAGRGWRLTGEKCWISNAPEADFYTVFARTAPGAG 176

Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVED 311
              +   L      GL      + +         L F         +LG+ +        
Sbjct: 177 SRGITAFLVPADRPGLT-GSALDMLSPH--PIGALAFDGVPVTADDVLGEADRGFRVAMG 233

Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371
              L        +V   + +L   + +  RR   GG L D   +   +A++AL   AA  
Sbjct: 234 TLNLFRPSVGAFAVGMAQAALEATLAHTARRDAFGGKLSDLQTVAHQVAEMALRTEAARL 293

Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431
           + +  A ++D+              A + K    + A  V+  A++  G         + 
Sbjct: 294 MVYAAATAYDDGAPG------VPRRAAMAKLLATETAQYVVDTAVQLHGARALRRGHLLE 347

Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458
             YRE  A  I  G+       +   L
Sbjct: 348 HLYREVRAPRIYEGASEVQRGIIAKEL 374


>gi|282912461|ref|ZP_06320257.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324157|gb|EFB54473.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus
           WBG10049]
          Length = 418

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 122/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +    + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGAFRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|309790696|ref|ZP_07685247.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
 gi|308227290|gb|EFO80967.1| acyl-CoA dehydrogenase domain-containing protein [Oscillochloris
           trichoides DG6]
          Length = 424

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 127/376 (33%), Gaps = 38/376 (10%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G+ W++ EF    H L+    H  L    W      +          A + +     + +
Sbjct: 72  GDYWERGEFP---HELVPGFAH--LVQETWATRPYAIDSLGPLLSGMACMEMARVDASIY 126

Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
                    +   +++  +      W P+             M +        LTE   G
Sbjct: 127 TFFGVQWGLAMGSISMFGSEAQKAHWLPQ-------------MSRFEAIGAWSLTEPDVG 173

Query: 209 TDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267
           +  AA  +   ++  D        KW  ++P +D  ++ A+             L +   
Sbjct: 174 SATAAGLTTTARREGDTWVINGAKKWSGNAPFADIHVVWARDLADQQVKG---FLIERGT 230

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
            GL  ++L  KI  R     ++   N        L  +    +  +    L  A   V+ 
Sbjct: 231 PGLHVEKLPGKIALRVVQNADIHLENCRVPERNRLPNAHSFRDVARQ---LAVARGGVAW 287

Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
               +A      A+ YA +R   G  +    +++  +  +  ++ A   L  R+A     
Sbjct: 288 AMTGVAMGAYEHALAYANQRQQFGQPIAGFQMIQNNLVQMLANVTAMQVLCTRMAQL--- 344

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
              ++ +   ++  A + K +C +     +A A   +GG+G + E  +AR + ++ A   
Sbjct: 345 ---QTRDGRISQERASLAKMFCGEKMRETVALARGVLGGNGILLEHHVARFFADAEALYS 401

Query: 443 LLGSGNAMVLDVLNLL 458
             G+     L V   +
Sbjct: 402 YEGTHEMNTLIVGRAI 417


>gi|327309604|ref|XP_003239493.1| hypothetical protein TERG_01478 [Trichophyton rubrum CBS 118892]
 gi|326459749|gb|EGD85202.1| hypothetical protein TERG_01478 [Trichophyton rubrum CBS 118892]
          Length = 399

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 126/365 (34%), Gaps = 29/365 (7%)

Query: 90  GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLE 147
             ER D+ E +P  H L      DG        S        +      +      A L 
Sbjct: 29  WAER-DRTEEYP--HELHAALSKDGWIGIALPESLGGAGLGISEATMMLQTIAQSGAGLA 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  +V +   VA   + +  K   P++ + E+                 G+TE   
Sbjct: 86  GAQSIHANVYATQPVAKFASEKQKKRMLPRLIAGEWR-------------TCFGVTEPNT 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           G +   + +   K  D     S   W  S+ ++   I+LA+       +     +     
Sbjct: 133 GLETLKLRTVATKDGDSYRLTSELSWISSAQVAQKMILLARTTPIEEVKKPSEGLSLFFI 192

Query: 264 DGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D      GL  +++K K+G RS    E+ F         L+G+       V         
Sbjct: 193 DFDRAAPGLDLRKIK-KMGGRSVDANEVFFDEYRIPADSLIGNEGEGFKIVLHGMNAERC 251

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++    ++L +A  YA+ R V G  +     +   +A   + + AA   ++    
Sbjct: 252 LLAGEALGLGYIALEKAAKYAKERVVFGRPIGQNQAIAHPLAAAYMSLEAAKLATYHATK 311

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +DE+++ S        +     KY   + A A    A+  +GG GY +E  + R+ RE 
Sbjct: 312 LYDESRNDSAITQQSVGVACNSAKYLAAEAAFAACERAVLTLGGMGYAQEYHVERYLREC 371

Query: 438 PANSI 442
               I
Sbjct: 372 FVPRI 376


>gi|271965450|ref|YP_003339646.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270508625|gb|ACZ86903.1| putative acyl-CoA dehydrogenase [Streptosporangium roseum DSM
           43021]
          Length = 393

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 97/285 (34%), Gaps = 19/285 (6%)

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
           TP        +  SR         +    +     LTE   G++   IT+  ++  D   
Sbjct: 92  TPGFGAMTLARHGSRWQRDELLPKLATGELETCFALTEPDAGSNALGITTFARRDGDEFV 151

Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRL----KNK 278
                 W      +   +++ +     E R     +   L +  P  +   RL      K
Sbjct: 152 VNGQKIWITGVQRATWMLLVTRTVPAAEARPRTNGMTVFLVN-VPEAVAAGRLSFQPIPK 210

Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G  +  +  +   +       ++G+++     + D+     +  A  ++ G  V+L  A
Sbjct: 211 MGANTTPSNMVFIDDLRVPSANVVGEVDQGALVLWDILNPERVLLAASALGGAEVALRVA 270

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R V G  +     +   +A +   I  A  + ++ A  FD       EA  A++
Sbjct: 271 VQYAKEREVFGRPIGANQAISFPLAQVKAKIELARLMLYKAAWLFDRQLPCGTEANIAKL 330

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            A          A      A +  GG  Y  E  +AR   ++   
Sbjct: 331 TASQA-------AWEAADHAFQTHGGMAYSLEYPVARLLADARIG 368


>gi|284165619|ref|YP_003403898.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
 gi|284015274|gb|ADB61225.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM
           5511]
          Length = 416

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 131/398 (32%), Gaps = 36/398 (9%)

Query: 73  LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132
             R+A++    +           +         L  ++    L        +       +
Sbjct: 13  AGRVADFMDEVVIPREREALATGEQISMAEIEDLWEQARERDLFAPQVPEEYGGQGLDFS 72

Query: 133 HKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
             + +      + + A  +   +P   +   + ++ T    +++   +   E        
Sbjct: 73  DMLPSFEQVGRSLIGALAIRANAPQEGNMHTLEMVGTEEQKEEYLRPLVQGE-------- 124

Query: 191 MQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247
                ++    +TE    GG+D   + S   K  D     + HKW+ S    +D ++++A
Sbjct: 125 -----LSSAFAMTEPKQGGGSDPKMLQSTAVKDGDEWVV-NAHKWWTSDGLDADFYLVMA 178

Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS-----NATVELEFSNTFGFL--- 298
           + +           +L     +G+   R    +G            E++F N    +   
Sbjct: 179 RTDLDAHPYEGTSIILVPRDADGVEVVRNVPHLGGHGITEREGGHAEVKFDNVRVPVENT 238

Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
           +G+ N      +       L   +      + SL  A  Y + R   G  L D+  ++  
Sbjct: 239 IGEENEGFRIAQMRLGGGRLTHCMRYSGMAQRSLEIAKAYLQEREAFGTKLEDKQALRHR 298

Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418
           IAD    + AA  +    A   D + +R E          ++K +   +    I  A++C
Sbjct: 299 IADAETRLHAARCMVRHAARELDRSDARIE--------VAMSKMFTANVTQDTIDLALQC 350

Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            GG+G  ++  IA  Y    A  I+ G+       +  
Sbjct: 351 CGGNGIGKDLPIAHFYENVRAFRIVDGADEVHRRSIAR 388


>gi|313122479|ref|YP_004038366.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
 gi|312296823|gb|ADQ69419.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551]
          Length = 404

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/411 (17%), Positives = 140/411 (34%), Gaps = 44/411 (10%)

Query: 63  EYVLSCTAQELARM-----ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117
           EY  + TA+ELA+           P    Y   G   D+        AL   +    L+ 
Sbjct: 2   EYDDTETARELAKRVREFVDERVIPVERDYLGDGPVPDEEI-----AALREEARERDLYA 56

Query: 118 SIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
                 +       R        A   L+    A  + +P   +   + L+ T    +++
Sbjct: 57  PQIPAEYGGQGLNFRDVLPAFEEAGRSLLGP-SAMRIAAPDEGNMHTLELVGTEAQKEEY 115

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQKISDGIYCLSGHK 232
              + + E                G  +TE    GG+D   I S+ +K  D  + + GHK
Sbjct: 116 LRPLVAGEIR-------------SGFSMTEPAPGGGSDPKMIRSEARKEGDE-WVIDGHK 161

Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIG--NRSNATVE 288
           W+ +    +D  I++A+ +     +      L     +G+   R    +G     ++  E
Sbjct: 162 WWTTQGSEADVLIVMARTDPEAHPYEGTSLFLVPADADGVEIVRDIPHVGGDLLGSSHAE 221

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + + N       LLG+ N      +       L   +        +L  A  Y + R   
Sbjct: 222 IRYENVRVPEENLLGEKNRGFEHAQQRLGPARLTHCMRYTGMATRALEVAKAYTKEREAF 281

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              L ++  ++  +A+    + A   +    A      +        ARI   ++K +  
Sbjct: 282 DSSLSEKQSVRFTVAEAETRLHAVRTMVRDAAGRIAAGEE-------ARIPVSMSKVYTA 334

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
            +   VI + ++  GG+G  ++  +A  Y +  A  ++ G+       +  
Sbjct: 335 NVVQDVIDDCLQLCGGNGIAKDLPLADFYEDVRAFRLIDGADEVHKRVIAR 385


>gi|327276681|ref|XP_003223096.1| PREDICTED: medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial-like [Anolis carolinensis]
          Length = 353

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 102/325 (31%), Gaps = 31/325 (9%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
           L+   +E    A     +     P    +D+   +P    L++R+   GL  +    S  
Sbjct: 42  LTEEQKEFQATARKFARE--EILPAAAEYDRTGEYPV--PLIKRAWELGLMNTHIPESCG 97

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
            +                        +  +      V +    +  K +  ++       
Sbjct: 98  GLGLGTFDACLITEELAFGCTGVQTAIEANSLGQMPVIIAGNEQQQKKYLGRMT------ 151

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                  +  +     +TE   G+D+A + ++ +K  D         W  +   ++ + +
Sbjct: 152 -------EAPLMCAYCVTEPGAGSDVAGLKTKAEKKGDEYIINGQKMWITNGGKANWYFL 204

Query: 246 LAQVEGRVGCF---LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302
           LA+                + +    G+   R +  +G R + T  + F +         
Sbjct: 205 LARTVPDPKAPTNQAFTGFIVEADSPGIQIGRKELNMGQRCSDTRGIVFEDVRVP---KE 261

Query: 303 NVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
           N+  G     KI +          A  +V   + +L EA  YA  R   G +L +   + 
Sbjct: 262 NILIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEATRYALERKTFGRVLAEHQAVS 321

Query: 357 RAIADIALDIAAATALS--FRLANS 379
             +A++A+ +  A      F  A  
Sbjct: 322 FMLAEMAMKVELARLDQPGFEAARL 346


>gi|313903824|ref|ZP_07837213.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466012|gb|EFR61537.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 402

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 119/364 (32%), Gaps = 40/364 (10%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           ++  F  A    +      GL   +    +                   A      L+  
Sbjct: 42  EEQRFPEAMWEQM---AEAGLLGLLIPEEYGGTGLGLLAMALVMEELASAGYG-NALVVV 97

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +    + +    +    + W P+I                ++ +   +TE   GT+   +
Sbjct: 98  TSMDTTAILRGGSEEQKQRWLPRI-------------ADGTLKLAFAITEPESGTNSFRM 144

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------EGRVGCFLVPRLLEDGS 266
            ++ +K            W   + ++D  +++A+         +G    + +   L D  
Sbjct: 145 KTEARKEGGVYRLRGEKGWITGADVADMILVVARTIPYAVLKEQGLPRTYGLGLFLVDRR 204

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             GL    + N  G        L F +       L+G  ++    +        + +A  
Sbjct: 205 APGLHLYPM-NTAGIEGYRQFRLVFDDVEVPADHLIGAEHMGAQVLFSALNPERILAAAT 263

Query: 324 SVSGMRVSLAEAIHYARRRHVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            V      L  A  YAR+R V G   +     ++  +A I +   AA  L++R A +FD 
Sbjct: 264 GVGLAEHVLRRAAEYARQRKVFGDRPIGSYQAVQHPLARIRVMQEAARLLTYRAAQAFD- 322

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI------ARHYRE 436
              R          A + KY   + A   +  A++  GG G++ E  +      AR  R 
Sbjct: 323 ---RQVSPERVGTWANMAKYLASETAIEAVDRAIQTFGGQGFVRENQLIHLWTSARLLRT 379

Query: 437 SPAN 440
           +P N
Sbjct: 380 APIN 383


>gi|312436663|gb|ADQ75734.1| acyl-CoA dehydrogenase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 403

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 122/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 80  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 139

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 140 -------------LRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSD 186

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 187 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 241

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +    + Y   R   G  +    +++ 
Sbjct: 242 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGAFRATLDYVTERKQFGKPISKYQLIQE 301

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LAN     +      + A++M  +            +A    
Sbjct: 302 KLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 354

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 355 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 396


>gi|325672989|ref|ZP_08152683.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325556242|gb|EGD25910.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 648

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/443 (17%), Positives = 143/443 (32%), Gaps = 51/443 (11%)

Query: 68  CTAQELARMANYNTPQLHAYGP--GGERWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSF 124
             A E AR  +    +L  Y     G   ++      A+   +      G         +
Sbjct: 48  PDADEAART-DTFVAELERYCRGLDGAVIERDARIPDAY---VAGLAELGCFGLKVPVEY 103

Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTPRVHKDWAPKIFSRE 182
             +   Q    RA  +        G L+S   S+     + L  T    + + P+     
Sbjct: 104 GGLGLSQLAYNRALMVVSSVHPSLGALLSAHQSIGVPEPLKLAGTEEQKQRFLPR----- 158

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-S 240
                              LTE   G+D A + S      DG  Y L G K + ++ + +
Sbjct: 159 ---------CAKGAISAFLLTEPDVGSDPARLASTATPTEDGSAYILDGVKLWTTNGVVA 209

Query: 241 DAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
           +  +++A+V  R G    +   + +    G+  +R    +G R         +       
Sbjct: 210 ELLVVMARVPRREGKRGGISAFVVEADSPGITVERRNAFMGLRGIENGVTRLNRVRVPA- 268

Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQP 353
              N+     + +KI L  L++  +++  M  +     L  A  ++  R   G  + +  
Sbjct: 269 --ENLVGREGDGLKIALTTLNAGRLAIPAMCAAAGKWSLKIAREWSAERVQWGRPVGEHG 326

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            ++  I+ IA    A  A+        DE ++         I A + K W  +MA  +  
Sbjct: 327 AVEAKISFIAATTYALEAVLELTGRMADEGRNDIR------IEAALAKLWSSEMAWQIAD 380

Query: 414 EAMECIGGSGYIEER----------SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463
           + ++  GG GY               + +  R+   N I  GS   M L +         
Sbjct: 381 DLVQIRGGRGYETAASLAARGERAVPVEQLLRDLRINRIFEGSSEIMRLLIAREAVDAHL 440

Query: 464 LFEQLFSTLEQDLGSSGKKVITI 486
                 +  E D+    K  +  
Sbjct: 441 AAAGSLADPEADIQRKAKAALGA 463


>gi|309365252|emb|CAP24079.2| hypothetical protein CBG_02437 [Caenorhabditis briggsae AF16]
          Length = 307

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 105/360 (29%), Gaps = 90/360 (25%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA---S 160
             LL  +    L     D  +     + +    A  +  +++++    ++  + +A    
Sbjct: 31  KNLLEEAFRLKLMGLEVDEEYGGS--RGSFFDVALTVEEISKVDPAVALTIHLQNALIAP 88

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220
           M++   +    + +  ++               T       L+E   G+D  A+ +   K
Sbjct: 89  MLSNYGSEEQKEHYLKRVC--------------TDSIESFALSETISGSDAFAMKTTATK 134

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
             D            ++P++D F++LA  E   G   +   L D +  G+   +    +G
Sbjct: 135 DGDDFVINGSKLGISNAPIADFFLVLANAEPEKGHRGITCFLVDRNQTGVVVGKKDQNLG 194

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
            R+  T                        D+     +      V   +    ++I Y R
Sbjct: 195 MRARTTR------------------YKYAIDILNASRILIGAQMVGLAQGCFDQSIPYLR 236

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  LID  +                                              
Sbjct: 237 ERKQFGKRLIDFQI---------------------------------------------- 250

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
                  A     + ++ +GG G+ ++    + YR+S    I  G+ N  +  +   ++ 
Sbjct: 251 -------ASKTSKQCIKWLGGIGFTKDFPAEKFYRDSAVGGIYEGTSNIQLNTIAKFIDN 303


>gi|78060538|ref|YP_367113.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77965088|gb|ABB06469.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 616

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 89/522 (17%), Positives = 177/522 (33%), Gaps = 85/522 (16%)

Query: 36  AYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR---MANYNTPQLHAYGPGGE 92
            + +D   +A  + + +     ++ L E      A +L R    A+     L   G    
Sbjct: 18  LFEADKRFLAEHSLYGTHDRASIDALLERA-RDFALDLGRSYQQADVEGCTLLDDG---- 72

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA--RLYLMAQLEAGH 150
              +V     +HAL  R   +      W  +           +      +++ A      
Sbjct: 73  ---QVRIPSHFHALWARFRDE------WSNTLFGTAHGLPPIVTQMIYEMFMGANPSFMT 123

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
               +  +  ++ +  TP                    AP++          TE + GTD
Sbjct: 124 YGGFTRPAIKLLQMHGTPHQKA--------------LIAPLEAYRWDACFCATEPQAGTD 169

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVP 259
           + A+  +   +   IY + G K ++S+ M +      + +L +++        + C +VP
Sbjct: 170 LTAVALRATPLERDIYAVDGEKVYISAGMHELTENTLYFVLGRIDTASPDSFSLSCLVVP 229

Query: 260 RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL-NVSTGPVE 310
           R   D        N +    L  K+G +  A   L F +   T G+LLG   NV    + 
Sbjct: 230 RFWPDEETGELQSNHVDCIGLPRKMGLKGCANTHLVFGSNGTTKGWLLGGRRNVGLLQLM 289

Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKR 357
            +     + + +  V     +   A+ YA RR   G  +             ++   ++R
Sbjct: 290 PLMNQARMSTGMFGVGVASSAYLHAVEYAGRRLQ-GRPIERASNTNAARVAIVEHADVQR 348

Query: 358 AIADIALDIAAATALSFRLAN-----SFDEAKSRSEEAAYARI------MAPITKYWCCK 406
            + D+   +     L  +LA      +  EA   ++ A   R       + PI K +   
Sbjct: 349 MLVDMKSRVDGCRGLLGKLAATATRAAMLEATPDADPAEIERHRKLQLLLTPICKAFISD 408

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTN 463
            A  +   A++  GG GY +   + ++ R+    SI  G+      D++       + + 
Sbjct: 409 QAWRICESAIQVHGGLGYTDASPVEQNARDVKILSIWEGTNYIQAQDLVRDKLGFGRHSR 468

Query: 464 LFEQLFSTLEQDLG----SSGKKVITILRDSISLCKEDKGLA 501
           L +     L+  L     +     +  L D++    +    A
Sbjct: 469 LIQYYRDELDVFLARQHHTGTHAELRPLFDALRTGADRIAAA 510


>gi|183981524|ref|YP_001849815.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium marinum M]
 gi|183174850|gb|ACC39960.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium marinum M]
          Length = 401

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPAFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            G   +   +      G+  +RL++K+G + + T  + F N       LLG   +  G  
Sbjct: 184 KGRAAIKSFIVPREHPGVIVERLEHKLGIKGSDTAVIRFDNARIPKDNLLGKPEIEVGKG 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIAD 361
               ++   D+    V+ M V +  A     R+ ++              Q         
Sbjct: 244 FSG-VMETFDNTRPIVAAMAVGIGRAALEEIRKILTDAGIDIDYDRPAYTQSAAAAEFLR 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  A+  LS R A   D     S+E       A I+K    +MA  V  + +E  G 
Sbjct: 303 MEADWEASYLLSLRAAWQADNKIPNSKE-------ASISKAKAGRMASDVTLKVVELAGT 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 TGYSEQLLLEKWGRDSKILDIFEGTQQIQQLVVARRL 392


>gi|297158280|gb|ADI07992.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis
           BCW-1]
          Length = 386

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/343 (18%), Positives = 125/343 (36%), Gaps = 24/343 (6%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L   +   G         +       A           A      L+       +++A 
Sbjct: 40  ELWAEAGKLGYLGVNLPEEYGGGGGGIAELSIVLEELGAAGCPLLMLVVSPAICGTVIAR 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P +                S  +  G+TE   G++   IT+  ++  DG
Sbjct: 100 FGTEEQKRAWLPGL-------------ADGSKTMAFGITEPDAGSNSHRITTTARRTPDG 146

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNR 282
            + L+G K F+S   +SDA +++ + E      L P   + +    G  Y+ +  ++   
Sbjct: 147 GWLLTGRKVFISGVDISDATLIVGRTEDARTGKLKPCLFIVERGAPGFSYRHIPMELA-A 205

Query: 283 SNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +    E+   +       L+GD +     +        + +A  ++   R +LA+A+ YA
Sbjct: 206 AEKQFEVVLDDVPLPAEALVGDEDAGLLQLFAGLNPERIMTAAFALGMGRYALAKAVEYA 265

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R V    +     +   +A   +++  A  +  + A+ +D       + A A   A +
Sbjct: 266 RVRQVWREPIGAHQAVAHPLAQAHIEVELARLMMAKAAHLYDAG-----DDAGAGEAANM 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            KY   + A   + +A+  +GG+G   E  +A+    +    I
Sbjct: 321 AKYAAGEAAVRAVDQAVHTLGGNGLTAEYGLAKLVTAARVARI 363


>gi|163752168|ref|ZP_02159372.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
 gi|161327945|gb|EDP99121.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99]
          Length = 421

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 135/377 (35%), Gaps = 44/377 (11%)

Query: 42  LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY-GPGGER-WD-KVE 98
           +L  L+  +     K  + +   +     Q +A         L+      G +  D KV 
Sbjct: 6   VLNELLNIYQRTELKGFDEIDADLADAILQGVADFTTEVMLPLNGSGDVEGCKLVDGKVI 65

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
               +    ++ + +G      D  +      +   + A  +     +        +  +
Sbjct: 66  APKGFADAYKQYVDNGWATLTCDPEYGGQGLPECIGVFATEMKTATNMAFAMYPGLTHGA 125

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218
            + +    +  + + +  K+ S E+  T             + LTE   GTD+A + ++ 
Sbjct: 126 YAAIHAHGSDALKQKYLKKLVSGEWTGT-------------MNLTESHAGTDLALLRTKA 172

Query: 219 QKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED--- 264
            +  +G + +SG K F+SS   D       +MLA++         +  F VP+++ +   
Sbjct: 173 VEAGEGRFAISGEKIFISSGDHDLAENIIHLMLARLPDAPEGVKGISLFAVPKIMVNADG 232

Query: 265 --GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322
             G  N LC   L++K+G   N+T  + F    G L+G+ +     +  M     L   +
Sbjct: 233 SLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLKAMFTMMNQARLGVGV 292

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGG------------ILIDQPVMKRAIADIALDIAAAT 370
             +    ++   A+ YA+ R    G             ++    ++R +         A 
Sbjct: 293 QGLGVSEIAYQNALAYAKDRIQGRGLSGVKDPSQAADPILVHGDVRRMLMAQKSFNEGAR 352

Query: 371 ALSFRLANSFDEAKSRS 387
           AL  + A   DEA+   
Sbjct: 353 ALIGQQALWLDEAERHP 369


>gi|320589371|gb|EFX01833.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera
           kw1407]
          Length = 413

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 42/362 (11%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D     P    L      +G         +          I  A + L    E+G  M+ 
Sbjct: 57  DTEHQFP--WELYTDLASNGWLGICLPEKYGGSEL----GISEAAVMLQTISESGACMNG 110

Query: 155 SVTSASMV------ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           + +    +      +        + W               P+ +       G+TE   G
Sbjct: 111 ASSVHMNIFGLEPVSKFGREDQKERWL-------------VPLIQGKQRACFGVTEPNTG 157

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCFLVPRLLE 263
            D   + S  ++  D  Y L G K F+SS  +++  ++LA+             +     
Sbjct: 158 LDTLKLQSSARREGDH-YILKGSKIFISSAQVAEKILILARTTPIEEVTKPSQGLSLFYT 216

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
           D + + +    +  K+G  +  T  L F         L+G        +        +  
Sbjct: 217 DLNRDSVQINEIP-KMGRSAVDTNVLLFDGWRVPADDLIGIEGDGFKMILHGMNAERILV 275

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
              ++     +L  A  YA  R V G  +     ++  +A+  +++ +A  + +  A  +
Sbjct: 276 GAEALGIGYAALRRASTYAGERVVFGKAIGSYQGIQHPLAECWMNLESARLVIYLAARLY 335

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D+  +  E A   + +A        + A      A+   GG GY +E  + R+ RE+  +
Sbjct: 336 DQGYTDGEYANAGKFLA-------SEAAFKAAERAIMTHGGMGYAKEYHVERYLREATLS 388

Query: 441 SI 442
            I
Sbjct: 389 RI 390


>gi|326775995|ref|ZP_08235260.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
 gi|326656328|gb|EGE41174.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1]
          Length = 405

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 114/365 (31%), Gaps = 17/365 (4%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL---YLMAQLEAGHLMSPSVTS 158
           AW   LR      L           V R     +    L    L +      L+  S+  
Sbjct: 12  AWCEELRTLAAQELRPLAEKGEPGRVNRPLLAALGELGLLGRMLASGALDLCLLRESLAR 71

Query: 159 ASMVALMTTPRVHKDWAPKIFSRE--YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
               A            P + S    +       ++         L+E   G+D AA++ 
Sbjct: 72  GCTEAETALALQGLGTIPIVRSGTAAHRERWLPEVRAGRAVAAFALSEPGAGSDAAALSL 131

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  +DG        W  ++P +D  ++ A+     G   +   L      GL      
Sbjct: 132 AAEHTADGWRLTGEKCWISNAPEADVAVVFARTTPGAGSRGITAFLVPSDRPGLT-GSAL 190

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           + +      T  LEF         +LG+ +       +   L        +V   R +L 
Sbjct: 191 DMLSPHPIGT--LEFDGVPVTADDVLGEPDRGFRVAMNTLNLFRPSVGAFAVGMARAALD 248

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
             + +   R   GG L D   +   +A++A    AA  L +  A ++D  +      +  
Sbjct: 249 ATLDHTAHRTAFGGPLSDLQAVSHQVAEMATRTEAARLLVYAAAAAYDAGE------SGV 302

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
              A + K +  + A  V+  A++  G         +   YRE  A  I  G+       
Sbjct: 303 PRRAAMAKLYATETAQYVVDAAVQLHGARALRRGHLLEHLYREVRAPRIYEGASEVQRTI 362

Query: 454 VLNLL 458
           +   L
Sbjct: 363 IAKEL 367


>gi|121711745|ref|XP_001273488.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119401639|gb|EAW12062.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 436

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 117/365 (32%), Gaps = 30/365 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQLEAG 149
           +  D+ E  P           DG                 +      +      A +   
Sbjct: 65  QECDQNERDP--KEFHAALAKDGWLGIALSEELGGAGLGVSEATMMMQTITQSGAGMAGA 122

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  +V +   +A   T    ++  PKI +  +                 G+TE   G 
Sbjct: 123 QAIHANVYATQPLARFGTKAQLEETIPKIINGTWR-------------TCFGVTEPNTGL 169

Query: 210 DIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           +   + +   K    D         W   + ++   I+LA+       +     +     
Sbjct: 170 ETLKLKTSATKTAAGDAYSVTGQKIWITCAQVASKMILLARTTPIEEVKKSTQGLSMFCI 229

Query: 264 D--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           D   S +GL  +R+K K+G R+    E+ F N       L+G  N   G +         
Sbjct: 230 DLNRSTSGLDMRRIK-KMGGRAVDANEVFFDNYQIPASTLVGQENEGFGIILHGMNAERC 288

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  ++     +L  A  YA  R V G  +     +   +AD  + + AA   ++  A 
Sbjct: 289 LLAGEALGLGYAALERAAQYANDRVVFGRPIGQNQGIAHPLADAYMKLEAAKLATYHAAK 348

Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
            +D +++ S        +     KY   + A      A+   GG GY  E  + R+ RE 
Sbjct: 349 LYDASQTDSSIPFHSVGVACNSAKYLAAEAAFTACERAVLTHGGMGYAMEYDVERYLREC 408

Query: 438 PANSI 442
               I
Sbjct: 409 LVPRI 413


>gi|27381474|ref|NP_773003.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 gi|27354642|dbj|BAC51628.1| bll6363 [Bradyrhizobium japonicum USDA 110]
          Length = 400

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 121/351 (34%), Gaps = 41/351 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA- 163
             +      G   ++    +          +RAA + L      G   SP+     ++  
Sbjct: 53  EFVEALTEAGFLGALIPEEYGGSGLP----LRAAAVILEEINANGCAASPAHAQMYIMGT 108

Query: 164 --LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
                + R  + + P I                      G+TE   G+D   + ++ ++ 
Sbjct: 109 LLRHGSERQKRAYLPDIAEG------------KLRLQAFGVTEPNTGSDTTQLKTRAERR 156

Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLED---GSPNGLCYQ 273
            D IY ++G K + S +  SD  ++LA+       +     +   + D      +GL  +
Sbjct: 157 GD-IYVVNGQKIWTSRALHSDLMLLLARTTPLDQVKKRTDGLSVFVVDLREAKGHGLEIR 215

Query: 274 RLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
            +K  I N    T E+   N       L+G+       + D      +  A   V   R 
Sbjct: 216 PIKAMI-NH--NTTEVFIENLRVPAENLIGEEGHGFRYILDGMNAERILVASECVGDGRW 272

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            L + + YAR R V G  +     ++  +A    ++ AA  +  R A  F   +    +A
Sbjct: 273 LLNKGVAYARERSVFGRPIGQNQGIQFPLARAYAELEAADMMCRRAAALFQAGRPCGSDA 332

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             A+++A    +     A        +  GG  + +E  + R +RE     
Sbjct: 333 NIAKLLASEATWKAADTAF-------QTHGGFAFAQEYDVERKWREVRLYQ 376


>gi|297517651|ref|ZP_06936037.1| putative acyl-CoA dehydrogenase [Escherichia coli OP50]
          Length = 214

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 11/213 (5%)

Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPV 309
            +           D S  G+    L +KIG    +T E+   N        +     G +
Sbjct: 5   PKDPKKAFTLWWVDSSKPGIKINPL-HKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFL 63

Query: 310 EDMKI--LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
             M    +  L +A  S      +  +A  YA +R   G  +    +++  +A +A+ I 
Sbjct: 64  NVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKID 123

Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427
               +  ++A   D+ +S    AA A       K +C + A  VI +A++ +GG GY +E
Sbjct: 124 NMRNMVLKVAWQADQHQSLRTSAALA-------KLYCARTAMEVIDDAIQIMGGLGYTDE 176

Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
             ++R +R+     I  G+   M+      + K
Sbjct: 177 ARVSRFWRDVRCERIGGGTDEIMIYVAGRQILK 209


>gi|193787010|dbj|BAG51833.1| unnamed protein product [Homo sapiens]
          Length = 356

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 113/291 (38%), Gaps = 35/291 (12%)

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----L 332
           +G +++ T E+ F           NV        K+ ++ L++    ++          +
Sbjct: 1   MGIKASNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGII 57

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           A+A+ +A  R   G  + +  +++  +A + +      ++++ ++ + D+       A  
Sbjct: 58  AKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG------ATD 111

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            +I A I+K +  + A  V  E ++ +GG G+++E  + R  R+     I  G+ + + L
Sbjct: 112 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL 171

Query: 453 DVL--NLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRDSISL-------------C 494
            V     ++KG  L   L S L+   G +G    +    LR    L              
Sbjct: 172 FVALQGCMDKGKELSG-LGSALKNPFGDAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPEL 230

Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545
                LA    E+ A    A  L +     + + FL  R  D     + M+
Sbjct: 231 SRSGELAVRALEQFATVVEAK-LIKHKKGIVNEQFLLQRLADGAIDLYAMV 280


>gi|170742882|ref|YP_001771537.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168197156|gb|ACA19103.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46]
          Length = 401

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 79/429 (18%), Positives = 147/429 (34%), Gaps = 55/429 (12%)

Query: 54  VHKELELLGEYVLSCTAQEL----ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRR 109
           +  E+E     V +   +E+    A  ANY+  +         R D +E       L  R
Sbjct: 5   LSPEVEDYRARVAAFVEREILPVEADRANYDPHE-------NIRLDLLE------DLRAR 51

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167
           +   GL C    R        +            +        S +    +M+ L    T
Sbjct: 52  AKAAGLWCLQLRRETGGQGLGKVGMAACYTEMNRSIFGPAVFNSAAPDDGNMMVLEALAT 111

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR--GGTDIAAITSQGQKISDGI 225
           P   + W               P+   SV     +TE    GG+D + I ++ +++ DG 
Sbjct: 112 PEQKRSWLD-------------PIVAGSVRSAFAMTEPHPGGGSDPSMIRTRAERLPDGR 158

Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN--R 282
           Y + G KW+++    +  FI++A+       + +   L      G    R    +G    
Sbjct: 159 YRIFGRKWYITGAAEAAHFILIARTSDDP-RYGLTAFLFHRDQPGWEILRRIEIMGPEEH 217

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL------IYLDSAIMSVSGMRVSLAEAI 336
                EL F    G  +   +V  G  + +K+         L   +  +      +  A 
Sbjct: 218 GGH-CELAFD---GLEVAPEDVLLGEGQGLKVTQVRLGPARLTHCMRWLGLAMRCVEIAR 273

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA  R   G  L ++  ++  +  +A+DI     L  R A   D+ +   +E + A+I 
Sbjct: 274 AYAAEREGFGVRLAERESVQLMLGGLAMDIEIGRLLVMRAAWELDQGRFARKEISMAKIQ 333

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                +    +        ++  G  GY ++  +   YR +    ++ G+     + +  
Sbjct: 334 VANLLHRAADVG-------IQINGARGYSKDTVLEWIYRYARQARLVDGADEVHRMVLNR 386

Query: 457 LLEKGTNLF 465
            LEK    F
Sbjct: 387 HLEKEGRGF 395


>gi|103487343|ref|YP_616904.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977420|gb|ABF53571.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis
           RB2256]
          Length = 431

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 129/432 (29%), Gaps = 27/432 (6%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++  + L A +    + +  E++ L        A +  R  ++       +      WD 
Sbjct: 3   FAVPADLQAYLDELDAFIEAEIKPL------EEADDNIRFFDHR----REHSRT--DWDN 50

Query: 97  VEFHP-AWHALLRRSIHDGLHCSIWDRSFEP-VVRKQAHKIRAARLYLMAQLEAGHLMSP 154
                  W ALL+ +         W  S       K    +  A +      +   L + 
Sbjct: 51  QGLPRHEWEALLKEATRRADAAGHWRFSAPKKYGGKDGSNLWMAVIREHFAAKGLGLHND 110

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
                S+V       + + +A    S E          +       GLTE   G+D   +
Sbjct: 111 LQNEHSIVGNFPFVEMFEQFA---TSEEQKAEFILGGFEGRRRTAFGLTEPDHGSDATHM 167

Query: 215 TSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNG 269
            ++  + +    DG        W     ++       +  G  G    +  LL      G
Sbjct: 168 ETRAVRQTRDGVDGWLINGRKMWITGMHVATHCATFCRTSGADGDAKGITCLLVPTGTPG 227

Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
           +          N       + F++ +      LG ++      +       +  A  S+ 
Sbjct: 228 MTVDEYMWTF-NMPTDHPRMTFADVWVPDSARLGPVDGGLSIAQSFVHQNRIRQAASSLG 286

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
                + E++ YAR R   G  L     ++  + ++A        L  + A   D    +
Sbjct: 287 AAVYCIEESVKYARERKPFGEALARNQAIQFPLVELATQAEMLRLLIRKTAWDMDNTPHK 346

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
             E   +     +  YW  ++       AM+  GG GY   +     YR      I  G+
Sbjct: 347 EIERTLSDK-VSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRITEGA 405

Query: 447 GNAMVLDVLNLL 458
               +  V   L
Sbjct: 406 EEIQMRKVAAYL 417


>gi|310800730|gb|EFQ35623.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 443

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 130/368 (35%), Gaps = 37/368 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+ E  P           +G        S           I  A + +    E+G  
Sbjct: 73  QEHDQNEQDP--KEFHAALAENGWLGIALPESLGGSGL----GISEATMMMQTISESGAG 126

Query: 152 MSPS------VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           M+ +      V +   +A   T    +   PKI S E+                 G+TE 
Sbjct: 127 MAGAQSIHANVYATQPLAKFGTREQLEGTIPKIISGEWR-------------TCFGVTEP 173

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPR 260
             G D   + +  +K SDG Y ++G K +++ + ++   I+LA+     +       +  
Sbjct: 174 NSGLDTLRLATMAKKQSDGSYVVTGQKIWITCAQVASKMILLARTKAYEDCSKPSEGLSL 233

Query: 261 LLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              D   S  GL  +++K K+G R+    E+ F +       L+G        +      
Sbjct: 234 FCIDLDKSQPGLDMRKIK-KMGGRAVDANEVFFDSYHIPATSLIGQEGQGFKIILHGMNA 292

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
                A  ++     ++A+A  YAR R V    +     +   +AD  + + AA   ++ 
Sbjct: 293 ERCLLAGEALGLGYAAIAKASAYARDRVVFNRPIGQNQSIAHPLADAYMKLEAAKLATYH 352

Query: 376 LANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
            A  +D ++           + A   KY   + A      A+   GG GY  E  + R+ 
Sbjct: 353 AARLYDASRDDPCIRQDQVGVAANSAKYVAAEAAFTACERAVLTHGGMGYAAEYDVERYL 412

Query: 435 RESPANSI 442
           RE     I
Sbjct: 413 REIFVPRI 420


>gi|312217104|emb|CBX97053.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans]
          Length = 445

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/374 (14%), Positives = 117/374 (31%), Gaps = 35/374 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHK------------IRAARLYLMAQLEAGHLM 152
              R +   G +     R +      +  +            + A  L L   L+  H +
Sbjct: 68  EARRLADEAGFYRLSLPRQYGGQNGAEDGRGSNLWMAVIREHLAAKGLGLFNDLQTEHSV 127

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             +     M+      +  +++ P     E+              +  GLTE   G+D  
Sbjct: 128 VGNFPDLVMLMNFGGEQQKREFIPARLEGEFR-------------MTFGLTEPGHGSDAT 174

Query: 213 AITSQG---QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRLLEDGSP 267
            + ++G    +     + L+G+K + +         + A+  G  G    +   +     
Sbjct: 175 HMETKGFLEVRNGVRGWLLNGYKKWQTGMHHATHCSIFARTSGNDGEVKGISCFIVPIDT 234

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
            GL  +  +  + N       +  +N +      LG L+      +       +  A  S
Sbjct: 235 PGLKAESFEWTL-NMPTDHATVSLTNVWIPETSALGPLHNGLAVAQAFVHENRIRQAASS 293

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +      + E++ YA  R   G  L     ++  + ++A        L  + A   D A 
Sbjct: 294 LGAALYCIQESVAYANSRAPFGTPLSHNQGIQFPLVELATQCEMLRQLVRKTALEMD-AM 352

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
             ++          +  Y+  ++      +A++  GG+GY         +R      I  
Sbjct: 353 PHADIERRLGDKVSMCNYYANRLCTQAADQAIQVHGGNGYSRHWPFEHIWRHHRRYRITE 412

Query: 445 GSGNAMVLDVLNLL 458
           GS    +  V   L
Sbjct: 413 GSEEIQMRKVAAYL 426


>gi|289621314|emb|CBI52097.1| unnamed protein product [Sordaria macrospora]
          Length = 438

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 127/362 (35%), Gaps = 25/362 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           ++ D+ E +P           DG           P     A    +    +M  +     
Sbjct: 68  QQHDQTEEYP--KEFHAALAQDGWLGIA-----LPDALGGAGLGISEATMMMQTIAESGA 120

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
                 S       T P        K  ++E        +    + +  G+TE   G D 
Sbjct: 121 GMAGAQSIHANVYATQP------LAKFGTQEQLEQTIPNIIAGKLRVCFGVTEPNAGLDT 174

Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLED-- 264
             + +  +K  DG Y +SG K +++ + ++D  ++LA+   R         +     D  
Sbjct: 175 LRLETFAKKQDDGSYSVSGQKIWITCAQVADKMMLLARTTPREEAKKPSEGLSLFCIDLN 234

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              + L   ++K K+G R+    E+ F N   +   L+G        +           A
Sbjct: 235 RDDHRLKVSKIK-KMGGRAVDANEVFFENYPISGDSLIGKEGQGFKIILHGMNAERCLLA 293

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     +L +A  YAR R V    +     +   +AD+ + + AA   ++  A  +D
Sbjct: 294 GEALGLGYAALGKAAEYARERVVFQRPIGQNQGIAHPLADVYMRLEAAKHATYHAARLYD 353

Query: 382 EAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
            +K+  S       +     KY   + A A    A+   GG GY  E  + R++RE    
Sbjct: 354 ASKTDGSIRQEEVGVACNSAKYLAAEAAFAACERAVLTHGGMGYAVEYDVERYFRECLVP 413

Query: 441 SI 442
            I
Sbjct: 414 RI 415


>gi|301060230|ref|ZP_07201097.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
 gi|300445742|gb|EFK09640.1| acyl-CoA dehydrogenase family protein [delta proteobacterium
           NaphS2]
          Length = 506

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 114/308 (37%), Gaps = 17/308 (5%)

Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SS 237
           F  E       P         + +TE   GTD AA  +  ++  D  Y L+G K F+ S+
Sbjct: 101 FGDEEQKKRFLPRISKGEIGAIVITEPVAGTDAAAQVTGARRDGDA-YVLNGKKRFIVSA 159

Query: 238 PMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293
            ++D +++ A+     E R     +   + +    G   +++   IG  +     L+F +
Sbjct: 160 GVADRYMVYARTSDDAEDRRKYRHLTAFIVEKGTPGFSVEKINEIIGFENIQNGVLDFKD 219

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  +LG+       +           +  +   M   L   + Y +RR   G   I
Sbjct: 220 VRVPVSNMLGEEGQGWSVMTAGLNFERTLISAQTAGWMEELLRNTVPYCQRRVQFGKPTI 279

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
                +  +AD+   +  A  LSF  A  +D     + E   A       K +  +   A
Sbjct: 280 SFLNNQFKVADLVSRLKIARLLSFYTAYLWDLGWDITLECNMA-------KVYNAESVMA 332

Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLF 469
              +A++ +GG G      ++     +   +I  G+ +A  + +    + +    F+Q  
Sbjct: 333 SSLDAIQVMGGDGLTPFYPLSAIMHVAKVENIAGGTMDACRMVIHRTAMRQMAQEFKQPR 392

Query: 470 STLEQDLG 477
             + ++LG
Sbjct: 393 RVIHEELG 400


>gi|296394802|ref|YP_003659686.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985]
 gi|296181949|gb|ADG98855.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM
           44985]
          Length = 384

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 126/351 (35%), Gaps = 35/351 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS-VTSASMV 162
             L R +   G         F        +++      L AQ     LM  S     +++
Sbjct: 38  WDLWREAGKLGFLGVNIPEEFGG-GGAGMYELSLVAEELNAQGSGLLLMVVSPAICGNVI 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + W P +                S  +  G+TE   G++   IT+   +  
Sbjct: 97  NRFGTDEQRQQWLPGL-------------GDGSKILVFGITEPDAGSNSHRITTTATRDG 143

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIG 280
              + L+G K ++S   ++DA +++A+ E      L P   +      G  Y+ ++  + 
Sbjct: 144 SD-WLLTGRKVYISGVDVADAVLIVARTEDAKTGSLKPALFIVPRDTPGFEYRAIE--MA 200

Query: 281 NR-SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            R      EL F N       L+GD +     +        + +A   V   R +L  A+
Sbjct: 201 LRIPEHQFELAFDNIRLPAESLVGDPDAGIMQLFAGLNPERIMAAAGGVGTARYALRRAV 260

Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
            YA+ R V    +     +   +A I +++  A  +  + A  +D         A     
Sbjct: 261 DYAKTRTVFRTPIGAHQAIAHPLAQIKVEMELAKLMMQKAATLYDAGDDTGAAEA----- 315

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI------ARHYRESPANS 441
           A + KY   ++    + +A++ +GG+G   E  +      +R  R +P + 
Sbjct: 316 ANMAKYAAGEVGARAVDQAVQTLGGNGLTVEYDLGTQLANSRLMRIAPVSR 366


>gi|325833210|ref|ZP_08165716.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
 gi|325485592|gb|EGC88060.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eggerthella sp.
           HGA1]
          Length = 383

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 108/287 (37%), Gaps = 15/287 (5%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S +++        +  +A  L ++E  GG+D  ++ +   +  DG   L+G K F+++  
Sbjct: 103 SGQFEFVRTGYQTEGRLAFALAISEPEGGSDTMSMRTSA-RTIDGRLVLNGTKTFVNNGE 161

Query: 240 SDAFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295
              ++++A ++          +   L      G+    +  KIG        + F N   
Sbjct: 162 YAPYLLVAAIDRDASTGKHPALSFWLVPHDLPGIKVYPV-QKIGQSILPFSTVVFENVRL 220

Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353
              + L         +  +  +  L S   ++   + ++ +A+ YAR R   G  + +  
Sbjct: 221 DEPYRLHGKQAGFPQLFHLFEIGRLFSCATALGLAQAAMEDAVAYARTRTAFGTQIANFQ 280

Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413
            +++ + D+ + +       ++ A   D            +   P       + A  V +
Sbjct: 281 QIEQMLTDMEVKLDNMRNSVYKNAWKLDRGCGDRLGVVLMKRYVP-------EAATEVAS 333

Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +AM+  GG GY     ++  +++     +  G+   MV     L+ +
Sbjct: 334 DAMQIFGGRGYTRNERVSSIWQDCRGFQMAEGTDQIMVYVAAPLIME 380


>gi|224371050|ref|YP_002605214.1| Acd13 [Desulfobacterium autotrophicum HRM2]
 gi|223693767|gb|ACN17050.1| Acd13 [Desulfobacterium autotrophicum HRM2]
          Length = 414

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 123/369 (33%), Gaps = 33/369 (8%)

Query: 100 HPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159
            P W    +++    LH  +   S+  +                  +     ++ +   A
Sbjct: 49  SPFW-EFKKKAYELDLHTILIPDSYGGMGLTPLQLHLVLEELSWGSVGLTVDLAVAAFPA 107

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI-----AAI 214
            + +++    + ++                      +A    +TE   G+D       + 
Sbjct: 108 YLASMVPDDEIVENIIKPFCDCR----------DGKIAGCWAITEPMHGSDTLLPNYPSF 157

Query: 215 T-------SQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
                          D          ++S  P +   ++  Q++  +G       +    
Sbjct: 158 RNPDIPADCTATLDGDHYVINGQKAAWVSGAPYASHALLFCQIDPSMGHAGGGIFIVPLD 217

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV- 325
             G+       K+G R +   EL F N        +         ++I++   +A+M   
Sbjct: 218 LPGVKRGAPLEKMGQRDDPQGELYFDNVRVPANYLVAGPEAYEVMLEIILSATTALMGTC 277

Query: 326 --SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
                R +  EA+ YA+ R   G  LI+   +++ +  +   +     L+  +       
Sbjct: 278 ATGIGRAAFEEALEYAKNRVQCGKALIEHQDVQKKLFKMFSKVEMTRQLTRSVLEYNQNT 337

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
            + +EE +       I K + C+ A  +  +A++  GG+G   E  + + +R++ +  I 
Sbjct: 338 STPAEEYS------VIGKVFGCQYAFEIANDAVQIFGGNGLTREYIVEKLFRDARSMMIE 391

Query: 444 LGSGNAMVL 452
            G+ + + +
Sbjct: 392 DGANDVLAI 400


>gi|254482901|ref|ZP_05096137.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036773|gb|EEB77444.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 401

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 120/396 (30%), Gaps = 48/396 (12%)

Query: 85  HAYGPGGERWDKVEFH-----PAWHALLRRSIHDG--LHCSIWDRSFEPVVRKQAHKIRA 137
           H   P   ++DK E            LL      G     +    S   V       +  
Sbjct: 23  HMMRPYSRKYDKEEHTYPTEMDEVVKLLAGGRSAGSSTGGASAAESSAVVNGGNMAAVIG 82

Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197
            +      L     M  +    + +  + T    + +                    +  
Sbjct: 83  LQALAWGDLGLFLGMPANGLGNAAIQAVGTLAQREKY-------------------GTSY 123

Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257
             + +TE   G+D A I +   +  D         +  S   +D  ++ A ++  +G   
Sbjct: 124 AAMCITEPGTGSDSANIATTAVRDGDEWVLNGEKIYVTSGQWADTLVVWATLDKSLGKAA 183

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN------------VS 305
           +   + +    G    RL+ K+G R++ T  + FS+        L              +
Sbjct: 184 IKSFIVEKGTPGCEVTRLERKMGIRASDTAAITFSDCRIPADNILGSAELAADAEGRKKA 243

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGILIDQPVMKRAIADI 362
            G V           A M++   R +L  A        VS        +   ++  +  +
Sbjct: 244 FGGVMQTFDNTRPPVAAMALGVGRAALDLASELLTEEGVSPDYNRKPCNVSAVEAELYRL 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             +   A  L+ + A   D  +  S+EA+  +  A        +M   V    +E     
Sbjct: 304 EAEWEGARLLTLKAAWMADNKQPNSKEASMCKAKAG-------RMGNRVTLRCVELCQSL 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E R + +  R+S    I  G+     L V   +
Sbjct: 357 GYSESRLLEKFARDSKIIDIFEGTQQIQQLIVARRI 392


>gi|332671088|ref|YP_004454096.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
 gi|332340126|gb|AEE46709.1| acyl-CoA dehydrogenase domain-containing protein [Cellulomonas fimi
           ATCC 484]
          Length = 632

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 138/418 (33%), Gaps = 44/418 (10%)

Query: 91  GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
           G   ++ +  P    +L      G       + +  +        RA  L          
Sbjct: 78  GRAIERDDHIPD--EVLDALRGVGAFGMKIPQEYGGLGLSLVEYGRALMLVSTVHPSLAA 135

Query: 151 LMSP--SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
           L+S   S+     V +  TP   + + P+  +                     LTE   G
Sbjct: 136 LLSAHQSIGVPEPVHMFGTPEQKQKFLPRCAAG--------------AISAFLLTEPDVG 181

Query: 209 TDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDG 265
           +D A + +      DG  Y L G K W  + P+++  +++A V    G    +   + + 
Sbjct: 182 SDPARLATTATPTDDGTAYVLDGVKLWTTNGPIAELLVVMAVVPPHDGQRGGISAFVVEA 241

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +  G+  +     +G R                   L      ++    L  L++  +S+
Sbjct: 242 TTPGITVEHRNRFMGLRGMENGVTRLRQVRVPAANRLGREGEGLK--IALTTLNTGRLSI 299

Query: 326 -----SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
                 G + +L+ A  ++  R   G  + +   +   +A IA    A  ++    A   
Sbjct: 300 PAICAGGSKWALSVARQWSVERVQWGRPVGEHEAVGSKLAFIAATTFALESVFDLSARLA 359

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--------ERSI-- 430
           D  +         RI A + K W  +MA  V  E ++  GG GY          ER++  
Sbjct: 360 DAGQKD------VRIEAALAKLWASEMAYRVADELVQVRGGRGYETADSLAARGERAVAA 413

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
            +  R+   N I  GS   M L V               ++ +  LG+  +  +   R
Sbjct: 414 EQLLRDMRINRIFEGSSEIMRLLVAREAVDTHLTAAGDLASRDASLGAKARAAVGASR 471


>gi|145249220|ref|XP_001400949.1| acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88]
 gi|134081627|emb|CAK46561.1| unnamed protein product [Aspergillus niger]
          Length = 445

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 113/346 (32%), Gaps = 21/346 (6%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            H  L    W     P     A    +    +M  +           +       T P  
Sbjct: 84  FHAALARDGWLGIALPEELGGAGLGISEATMMMQTITQSGAGMAGAQAIHANVYATQP-- 141

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG---IYC 227
                 +  +RE        +   +     G+TE   G +   + +   K S G   IY 
Sbjct: 142 ----LARFGTREQLEETIPKIINGTWRTCFGVTEPNTGLETLKLKTLATKKSRGDSDIYS 197

Query: 228 LSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSP--NGLCYQRLKNKIG 280
           +SG K +++ + ++   I+LA+             +     D      GL  +++K K+G
Sbjct: 198 ISGQKIWITCAQVASKMILLARTTPLEEVTKSTQGLSMFCIDLDRTQPGLDMRKIK-KMG 256

Query: 281 NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            R+    E+ F         L+G  N     +           A  ++     +L  A  
Sbjct: 257 GRAVDANEVFFDGYEVPANTLIGQENEGFRIILHGMNAERCLLAGEALGLGYAALERAAD 316

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIM 396
           YA+ R V G  +     +   +AD  + + AA   ++  A  +D + K          + 
Sbjct: 317 YAKERVVFGRPIGQNQGIAHPLADAYMRLEAAKLATYHAARLYDASKKDEGIPLHSVGVA 376

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               KY   + A      A+   GG GY  E  + R+ RE     I
Sbjct: 377 CNSAKYLAAEAAFTACERAVLSHGGMGYAMEYDVERYLRECLVPRI 422


>gi|114705183|ref|ZP_01438091.1| acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
 gi|114539968|gb|EAU43088.1| acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506]
          Length = 418

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 138/413 (33%), Gaps = 38/413 (9%)

Query: 54  VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113
           +  ELE L   +    A E+  +         AY   G   D+         L  ++   
Sbjct: 19  ISPELEKLRTQIADFVANEIMPLEERP----DAYDGHGN-IDEALLSD----LRAKARSA 69

Query: 114 GLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
           GL C     +     + +     +       +      +  +P   +  ++  + T    
Sbjct: 70  GLWCPQLKHENGGLGLSKTGMSVLYETMNRSIFGPVVFNSAAPDDGNMMVLEALGTDEQK 129

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           + W   I              K   A  +   E  GG+D + + ++  +  D     +G 
Sbjct: 130 ERWLKPIVEG-----------KVRSAFAMTEPEPGGGSDPSMMLTRAVRDGDDWVV-NGR 177

Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN--RSNATVE 288
           KWF++   + D F+++A+             L   S       R    +G         E
Sbjct: 178 KWFITGAEAADHFMLIAKTADDKRRGH-TCFLFHKSQPNWKIVRRIPIMGPEEHGGH-CE 235

Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           LEF++       +LG+       V+       L   +  +   +  +  A  YA RR   
Sbjct: 236 LEFTDFRIPHSDILGEEGRGLKVVQTRLGPARLTHCMRWLGLAKRCVEIATDYAERREGF 295

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
           G  LID+  ++  + D+A+ I     L  + A   D+ +   +E + A+I      +   
Sbjct: 296 GVKLIDRESVQVMLGDLAMQIEVGRLLVMKAAWEIDQGRYGQKEISMAKIHVANLLHTAA 355

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             A       ++  G  GY ++  +   YR +    ++ G+     + +   L
Sbjct: 356 DRA-------IQINGARGYSKDTVLEWIYRYARQARLVDGADEVHKMVLNRHL 401


>gi|322508592|gb|ADX04046.1| Acyl-CoA dehydrogenase family protein [Acinetobacter baumannii
           1656-2]
 gi|323518201|gb|ADX92582.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
          Length = 386

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 126/366 (34%), Gaps = 38/366 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE----AGHLMSPSVTSA 159
             L+ R+   GL      R    +    +H  +A              A ++ +P   + 
Sbjct: 43  QELVSRACSWGLLTPHASREMGGLG--WSHLQKAVAFEEAGYSALGPIALNIHAPDEGNI 100

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQ 217
            ++ ++      + W  K+ + E                   +TE     G+D + + + 
Sbjct: 101 HLLDVVANDAQKERWLKKLVAGEIR-------------SCFTMTEPAPGAGSDPSMLQTT 147

Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
                D  Y ++G KW ++    +   I++A++E           L D +  G   ++  
Sbjct: 148 AIADGDD-YIINGRKWLITGADGASVAIIMAKMEDGSA----SMFLTDTNVEGFILEKNM 202

Query: 277 NKI-GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           N +    S     L F N       +LG++       +       L   +  +   R + 
Sbjct: 203 NAMDSCFSGGHGILRFENLRIPKENVLGEIGKGFKYAQVRLAPARLTHCMRWLGQARRAH 262

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  YAR R   G  L D   +   +AD  +DI          A   D  +  + E++ 
Sbjct: 263 DIATQYARERQSFGKRLGDHQGVGFMLADNEMDILTTRLAVHYCAQVLDLGEKGNYESSL 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
            ++++    +        V+  +++ +GG    +E  + + ++++    I  G+     +
Sbjct: 323 VKVISSEGIW-------RVVDRSVQILGGQAMTDESVVCKIFKDARGFRIYDGANEVHRM 375

Query: 453 DVLNLL 458
            +   L
Sbjct: 376 SIAKKL 381


>gi|73537377|ref|YP_297744.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
 gi|72120714|gb|AAZ62900.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia
           eutropha JMP134]
          Length = 389

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 117/361 (32%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +R ++    P     ++   H G   ++   ++                 +         
Sbjct: 31  QRIEEQNGFPE--EFVQALTHAGWLSALIPEAYGGSGLSLT-AASVIMEEINRNGGNSGA 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               +     +    +    K W P I S E                 + +TE   GTD 
Sbjct: 88  CHGQMYVMGCLLRHGSEEQKKRWLPGIASGELR------------MQSMAVTEPTTGTDT 135

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             + +   +  D         W      SD  ++LA+       +     +   + D   
Sbjct: 136 TKLKTTAVRKGDKYVVNGSKVWISRVQHSDLMLLLARTTPLDQVKRKSEGLSVFVVDLRE 195

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL  + ++N + N    T EL F N       L+G+       + D      +  A
Sbjct: 196 AIGKGLTVRPIRN-MVNH--ETNELFFDNLEVPAENLIGEEGKGLKYILDGMNAERILIA 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      +  A +YAR R V    +     ++  IA   +++ AA+ + ++ A  FD
Sbjct: 253 AECIGDGYWFVERASNYARERIVFDRPIGQNQGIQFPIARSYVNVEAASLMRYKAAALFD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K   +EA  ++++A    +             ++  GG G+  E  I R +RE+    
Sbjct: 313 AGKPCGKEANISKLLAADASW-------EAANVCLQTHGGFGFAAEYDIERKFRETRLYQ 365

Query: 442 I 442
           +
Sbjct: 366 V 366


>gi|163849367|ref|YP_001637411.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|163670656|gb|ABY37022.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus
           J-10-fl]
          Length = 442

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/307 (19%), Positives = 116/307 (37%), Gaps = 31/307 (10%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               + L  +P   + W P             PMQ+  +     LTE   G+  AA  + 
Sbjct: 154 CMGSIDLFGSPEQKQRWLP-------------PMQRFELIGSWALTEPDVGSATAAGLTT 200

Query: 218 GQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +   G++ L G  KW  ++P++D  I+ A+    V    V   + +    G   +RL+
Sbjct: 201 TARFERGVWVLDGAKKWSGNAPIADINIIWAR---DVSNNQVQGFIVERGTPGYEVERLE 257

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--- 333
            KI  R+     +  +         L    G      I   L     +V+     +A   
Sbjct: 258 GKIALRTVQNANIRLNGCRVPEANRLPNVGGFR---GIARQLAITRAAVAWAMTGVAMGA 314

Query: 334 --EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
              A+ YA++R   G  +    +++ ++  +  ++ A   +  R++         S+E A
Sbjct: 315 YERALAYAQQRIQFGRPIGGFQLVQNSLVQMLANVTAMQTMCLRMSQIAARTGKVSQEQA 374

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                  + K +C +     +A A   +GG+G + E  +AR++ ++ A     G+     
Sbjct: 375 ------SLAKVFCGEKMRETVALARAVLGGNGILLEHEVARYFADAEALYSYEGTHEMNT 428

Query: 452 LDVLNLL 458
           L V   +
Sbjct: 429 LIVGRAI 435


>gi|253734790|ref|ZP_04868955.1| acyl-CoA dehydrogenase FadD family protein [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253727269|gb|EES95998.1| acyl-CoA dehydrogenase FadD family protein [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 418

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 122/342 (35%), Gaps = 34/342 (9%)

Query: 126 PVVRKQAHKIRAARLYLMAQLE---AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182
           P  +  +   +    YL+A+ +   A  L        +      +      + PK+ S E
Sbjct: 95  PNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHE 154

Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSD 241
                        +     LTE   G+D+A  + +  ++  D        KW   + +SD
Sbjct: 155 -------------LRTCFALTEPEHGSDVAGGLETIAERQGDTWVINGEKKWIGGAHVSD 201

Query: 242 AFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299
              + A  +  G+  CF+V         +G+  + + NKI  R      ++ +N      
Sbjct: 202 VIPVFAVNKETGKPHCFVV-----RPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVDEA 256

Query: 300 GDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
             L   T   +  KIL       A M+  GM  +L   + Y   R   G  +    +++ 
Sbjct: 257 DRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQE 316

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            +A +  ++A A A   +LA      +      + A++M  +            +A    
Sbjct: 317 KLAMMQGNLAQAMATCAQLATMQAHGEYDEVATSTAKMMNAL-------RLRETVAMGRG 369

Query: 418 CIGGSGYI-EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             GG+G + ++  IAR + ++ A     G+     L +   L
Sbjct: 370 ITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRAL 411


>gi|330822761|ref|YP_004386064.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|329308133|gb|AEB82548.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 387

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 117/351 (33%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G         +          I  A L +       A L     +  ++ 
Sbjct: 39  HDFHQALAESGWLGIAMPEEYGGAGL----GISEAALMMHTISATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  T    K W P             P+ +       G+TE   G +   + ++
Sbjct: 95  GLHPVVVFGTDEQKKRWLP-------------PLIQGKDKACFGVTEPNAGLNTLKLQTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         +  ++ +++  ++L +        G   +     D   + +  + 
Sbjct: 142 AVREGDHYVVHGQKVFISTAQVANKILLLTRTRPAEECKGTEGLTLFYTDLDRSKVEVRE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+G +   T +L        +   +G+       +        +  A  +V   R +
Sbjct: 202 IA-KLGRKCVDTNQLFIDGLRIPVEDRVGEEGKGFSYILHGMNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA A  YA  R V G  +     ++  +A+  +D+ AA  +  + A  +D+  +   EA 
Sbjct: 261 LARAAGYAAEREVFGRPIGKNQAIQHPLAEAWMDLEAAHLMVQKAAWLYDQGANCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +     Y  C+ A       +   GG GY +E  + R+ RES    +
Sbjct: 321 AAKFLGAEAGYRACERA-------IFTHGGMGYAKEYHVERYMRESWIPRL 364


>gi|148254370|ref|YP_001238955.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146406543|gb|ABQ35049.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 424

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/440 (14%), Positives = 128/440 (29%), Gaps = 45/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           +S    LVA +      +  E++ L        A +  R  ++           G     
Sbjct: 3   FSLPKELVAYLDELDRFIATEIKPL------EEADDNIRFFDHRREWARTDFENGGLPRH 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY------LMAQL 146
            W+++           R+   G       + +                +      L   L
Sbjct: 57  DWEQLL-----RKAKDRADAAGHLRFAIPKRYGGKDGSNLWMAVIREHFASKGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  ++   +M+               +                   I  GLTE  
Sbjct: 112 QNEHSIVGNLPIVTMLDRYGRDDQKA-----MIDG---------SITGKYRITFGLTEPH 157

Query: 207 GGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++    +      + ++G K + +         + A+  G  G    +   
Sbjct: 158 HGSDATHMETKAVPATRDNVKGWLINGEKMWTTGMHVATHCALFARTSGNDGDARGITCF 217

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L      G+  +       N       + F++ F     L G++       +       +
Sbjct: 218 LVPAKAEGVKVEEYLWTF-NMPTDHPRVSFTDVFVPEDALFGEVGRGLSLAQCFVHENRI 276

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+      + E+++YAR R   G  L +   ++  + ++A        L  + A 
Sbjct: 277 RQAASSLGAAVFCINESVNYARERKPFGKALAENQAIQWPLVELATQAEMLRLLIRKTAW 336

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D+      E   +     +  YW  ++       A++  GG GY   +     YR   
Sbjct: 337 EMDQLTQAQVEHTLSDK-VSMCNYWANRLCCEAADRAIQVHGGMGYSRHKPFEHIYRHHR 395

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  GS    +  V   L
Sbjct: 396 RYRITEGSEEIQMRKVAGFL 415


>gi|295665047|ref|XP_002793075.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
 gi|226278596|gb|EEH34162.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01]
          Length = 412

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 108/335 (32%), Gaps = 21/335 (6%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L    W     P     +    +    +M  +          +S  M      P V    
Sbjct: 69  LAKDGWLGICMPTEYGGSQLGISEAAVMMQTISESGAGMSGASSVHMNIFGLEPVV---- 124

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             K  + E       P+ +       G+TE   G D   + S   +  D         W 
Sbjct: 125 --KFGNEEQKERFLIPLIQGRERACFGVTEPNTGLDTLRLRSTATREGDHYILKGSKIWT 182

Query: 235 LSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
            ++  ++  ++L +             +     D   + +    +  K+G  S  T  L 
Sbjct: 183 STAQNAEKILILVRTTPLDKVTKPSQGLSLFYTDLDRSQVDVTEIP-KMGRASVDTNSLF 241

Query: 291 FSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
           F N       L+G+ N     +        +  A  ++     +L  A  YA  R V G 
Sbjct: 242 FENWKVPATDLIGEENNGFKMIMHGMNAERILLAAEALGLGFAALRRAAIYANGRQVFGR 301

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            +     ++  +AD  + + A+  + ++ A  +D   +  E A  A+ +A    +  C+ 
Sbjct: 302 SIGQNQAIQHPLADAWMRLEASRLMVYQAAKMYDAGYTSGEYANAAKYLAAEAAFKACER 361

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A       +   GG GY  E  + R+ RE     +
Sbjct: 362 A-------VMTHGGMGYAREYHVERYLRECFIPRL 389


>gi|148703114|gb|EDL35061.1| acyl-Coenzyme A dehydrogenase family, member 9, isoform CRA_a [Mus
           musculus]
          Length = 381

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 112/310 (36%), Gaps = 30/310 (9%)

Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317
           +   + +    G+   + ++K+G R + T E+ F NT   +   L    G  +    +  
Sbjct: 1   MTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNI-- 58

Query: 318 LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
           L+S   S+           +     YA  R      L +  +++   A +A       ++
Sbjct: 59  LNSGRFSMGSAVAGMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESM 118

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           ++  +   D+            I A + K +  + A   ++EA++ +GGSGY+++    R
Sbjct: 119 AYLTSGMLDQPGFPD-----CSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYER 173

Query: 433 HYRESPANSILLGSG-NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489
             R++    I  G+    + L +    L   G  L  ++      ++ +  + +   LRD
Sbjct: 174 MLRDARILLIFEGNQWRILRLFIALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRD 233

Query: 490 SISLCKEDKGLARFLTEKIALASSA---------------AALYRAGMNDIADVFLENRF 534
           S+    +            +L  SA                 L R G N + +  +  R 
Sbjct: 234 SLGRTVDLGLTGDLGVVHPSLGDSANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRV 293

Query: 535 LDNCHSTHCM 544
            +   + + M
Sbjct: 294 ANILINLYGM 303


>gi|121611709|ref|YP_999516.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121556349|gb|ABM60498.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 390

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 122/385 (31%), Gaps = 43/385 (11%)

Query: 79  YNTPQLHAYG-PGGERWDKVEFHPAWHALL--RRSIHDGLHCS----IWDRSFEPVVRKQ 131
           ++ P           R    EF  A+H     +R+  +    +     W  +  P     
Sbjct: 5   HHAPPDKYQDIRDAVRALCAEFPDAYHRQADAQRAYPEAFVAALTKAGWMAALIPQEYGG 64

Query: 132 AHKIRAARLYLMAQLE----AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
           +         +M ++             + +   +    +    + + P+I   E+    
Sbjct: 65  SGLGLTEASVIMEEINRSGGNSGACHGQMYNMGTLLRHGSRAQKELYLPRIARGEWR--- 121

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247
                       +G+TE   GTD   I +   K  D         W      SD  I+LA
Sbjct: 122 ---------LQSMGVTEPGTGTDTTKIKTSAVKKGDRYLVNGQKVWISRVQHSDWMILLA 172

Query: 248 QVEG----RVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297
           +             +   + D      +G+  + + N + N    T EL F N       
Sbjct: 173 RTTPLAEVARKSEGMSIFMVDLRQAEKSGMTVRPIPN-MVNH--ETNELFFENLEIPAEN 229

Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357
           L+G        + D         A   +      +     YA+ R+V G  +     ++ 
Sbjct: 230 LIGQEGQGFRYILDGLNAERTLIAAECIGDGYWFIDRITRYAKERNVFGRPIGQNQGVQF 289

Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417
            IA   +++ AA  + ++    FD  +S   +A  A+ +A    +             ++
Sbjct: 290 PIAQAYIELEAANLMRWQACALFDAQQSCGAQANMAKYLAAKASW-------EAANVCLQ 342

Query: 418 CIGGSGYIEERSIARHYRESPANSI 442
             GG G+  E  + R +RE+    +
Sbjct: 343 YHGGFGFACEYDVERKFRETRLYQV 367


>gi|317505934|ref|ZP_07963766.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255710|gb|EFV14948.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus
           rugosus ATCC BAA-974]
          Length = 384

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 122/347 (35%), Gaps = 31/347 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS-VTSASMV 162
             L R +   G         F        +++      L AQ     LM  S     +++
Sbjct: 38  WELWREAGKLGFLGVNIPEEFGG-GGAGMYELSLVAEELNAQGSGLLLMVVSPAICGNII 96

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   + W P +                S  +  G+TE   G++   IT+  ++  
Sbjct: 97  NRFGTPEQRQQWLPGL-------------GDGSKILVFGITEPDAGSNSHRITTTAKRDG 143

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIG 280
              + L+G K F+S   ++DA +++A+ E      L P   +      G  YQ +   + 
Sbjct: 144 SD-WLLTGRKVFISGVDVADAVLIVARTEDAKTGNLKPALFIVPRDTPGFEYQPID--MA 200

Query: 281 NRSNATVE--LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
            R     +  L F +       L+GD +     +        + +A   V   R +L  A
Sbjct: 201 VR-LPERQFSLFFDDMRLPAEALVGDPDGGIMQLFAGLNPERIMAAAGGVGSARYALDRA 259

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + YA+ R V    +     +   +A I ++   A  +  + A  +D           A  
Sbjct: 260 VDYAKTRTVFKAPIGAHQAISHPLAQIKIETELAKLMMQKAAVLYDGGDDFG-----AAE 314

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A + KY   + +   I +A++ +GG+G   E  +      +    I
Sbjct: 315 AANMAKYAAAEASVRAIDQAVQTLGGNGLTVEYDLGTQLANARIMRI 361


>gi|269217182|ref|ZP_06161036.1| crotonobetainyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
 gi|269129319|gb|EEZ60404.1| crotonobetainyl-CoA dehydrogenase [Slackia exigua ATCC 700122]
          Length = 382

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/372 (13%), Positives = 108/372 (29%), Gaps = 26/372 (6%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
              D+   +P      +     G    +       +  +  +    A    + +  A   
Sbjct: 30  HECDENHTYPL--RWTKALCDLGFDRILLPEEHGGLGLEDPNVTLMAIYEELGRYGAPTY 87

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   +T  + +    TP         + S E                    TE   G+D+
Sbjct: 88  VLYELTGFTTILREGTPEQIDAILSSLGSGEQ-------------IFNSACTEPGAGSDV 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
             +T+   + +  IY      +  SS      I++ +        ++     D S  G+ 
Sbjct: 135 GGLTTTYTRRNGKIYLNGTKTFITSSKGVKYLIIMCRDADNP--DVISEFFVDMSKPGIE 192

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
              L  K+G R ++  E+  ++         G                            
Sbjct: 193 LSPLP-KLGLRMDSCCEVYLNDVEMEEKDFFGTEGNGFNRGIADFNFERWLVGACDYGTA 251

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
             +  +A  +A +R   G  +    +       + + + A   + +  A + D      +
Sbjct: 252 ICAFEDAAKHAWQRIAFGKPIARFQLNTLKFCTMKIKLDAMKHMLYEAAWNADRNAGNYD 311

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
             A A              +  V+ +AM+ +GG     E  + R +R+   + +  G+  
Sbjct: 312 AGAAAACKYYCAN-----ASFEVVDDAMQIMGGIAVASEHRVNRIWRDLRVDRVSGGTDE 366

Query: 449 AMVLDVLNLLEK 460
            M+L       K
Sbjct: 367 MMILTAGKAAIK 378


>gi|120402904|ref|YP_952733.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955722|gb|ABM12727.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 460

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 119/346 (34%), Gaps = 30/346 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ ++   G+        F+ +   +     A     +A  + G  +          AL
Sbjct: 136 DLIAKAAELGITAINVPEDFDGIAEHRTTVTGALVAEALAYGDMGLALPILAPGGVASAL 195

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      +  K FS +  P              + + E     D  A+ +   +  
Sbjct: 196 THWGSADQQATYL-KEFSGDNVPQ-----------ACVAIAEPHPLFDPTALKTTAVRTP 243

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G           ++  ++ FI+ AQ+ G+   F+V       S  GL        +G R
Sbjct: 244 SGYRLDGVKSLVPAAADAEVFIIAAQLNGKPALFIVEA-----STKGLTVTP-DPSMGIR 297

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGP---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           + A   +E       L   L           +   L  L  A ++V      L   I Y 
Sbjct: 298 AAALGRVELDKVTVPLSARLGEEDATDADYSEAIALSRLGWAALAVGTSHAVLDYVIPYV 357

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +  +  +    A+IA+++     +++R A   D+  S + EAA A+ +   
Sbjct: 358 KERTAFGEPIAHRQSVAFMCANIAIELDGLRLITWRGAARADQGMSFAREAALAKKL--- 414

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                   A  +  + ++ +GG GY +E  + R YR+  A  +  G
Sbjct: 415 ----GSDKAMQIGLDGVQLLGGHGYTKEHPVERWYRDLRALGVAEG 456


>gi|269126692|ref|YP_003300062.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268311650|gb|ACY98024.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM
           43183]
          Length = 393

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 122/362 (33%), Gaps = 38/362 (10%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL----EA 148
           WD+ +    W   + +  +  G         +    +       A               
Sbjct: 28  WDRCDAEKRWPEEVWQELVKGGWTALAIPEEYGGAGQGLLELAVALENLAAGGAGGAATF 87

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            +L++P+      +A   T    +++ PKI + E             +     +TE   G
Sbjct: 88  MYLLTPA-FGGLTIARHGTEAQRREFLPKIAAGE-------------LETCFAITEPDAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLED 264
           ++   I++   +  D         W      +D  +++ +     E R        LL D
Sbjct: 134 SNSINISTHAVRDGDHFLVRGQKIWISGVERADYMVLVTRTIPAAEARPRTSGFTVLLVD 193

Query: 265 G----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
                +   L YQ +  K+G  + A+  +   +       +LG+++     + D+     
Sbjct: 194 IKEAVAAGTLTYQPIP-KLGTNTVASNMVFLDDVRVPADRVLGEVDQGFAVLWDILNPER 252

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + +A   V    ++L  A  YAR R   G  +     +   +A I   +  A  ++++ A
Sbjct: 253 ILAAAGGVGSAELTLKIACDYARERAPFGKPIGANQAVAFPLARIKAQVELARLMTYKAA 312

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D  +    EA  A++ A                 A +  GG  Y  E  +AR +R++
Sbjct: 313 WLWDRHRPCGAEANIAKLTAADAA-------WQAADRAFQVHGGMAYSLEYPVARFFRDA 365

Query: 438 PA 439
             
Sbjct: 366 RI 367


>gi|319760856|ref|YP_004124793.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115417|gb|ADU97905.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 387

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 117/351 (33%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G         +          I  A L +       A L     +  ++ 
Sbjct: 39  HDFHQALAESGWLGIAMPEEYGGAGL----GISEAALMMHTISATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
               V +  T    K W P             P+ +       G+TE   G +   + ++
Sbjct: 95  GLHPVVVFGTDEQKKRWLP-------------PLIQGKDKACFGVTEPNAGLNTLKLQTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         +  ++ +++  ++L +        G   +     D   + +  + 
Sbjct: 142 AVREGDHYVVHGQKVFISTAQVANKILLLTRTRPAEECKGTEGLTLFYTDLDRSKVEVRE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           +  K+G +   T +L        +   +G+       +        +  A  +V   R +
Sbjct: 202 IA-KLGRKCVDTNQLFIDGLRIPVEDRVGEEGKGFSYILHGMNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA A  YA  R V G  +     ++  +A+  +D+ AA  +  + A  +D+  +   EA 
Sbjct: 261 LARAAGYAAEREVFGRPIGKNQAIQHPLAEAWMDLEAAHLMVQKAAWLYDQGANCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +     Y  C+ A       +   GG GY +E  + R+ RES    +
Sbjct: 321 AAKFLGAEAGYRACERA-------IFTHGGMGYAKEYHVERYMRESWIPRL 364


>gi|304391704|ref|ZP_07373646.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
 gi|303295933|gb|EFL90291.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130]
          Length = 484

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 146/527 (27%), Positives = 224/527 (42%), Gaps = 63/527 (11%)

Query: 35  NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94
           NA+S +++L       P  V ++L  L  Y  +  A+ELAR+     P+L         +
Sbjct: 10  NAFSRNTVLNGAANGLPDPVLEDLAELAIYTEARQAKELARLTTLFQPRL---DGDAAAF 66

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D   FHPA+HAL RR +  GL  S+W    E V     H  RA RL   A LE  HL   
Sbjct: 67  D---FHPAFHALARRGVTAGLAGSVWSN--EEVEAGARHLTRALRLATAATLEPTHLTLL 121

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           S T ASM ALM        WA  + SR+YD   +   +K  + + L +            
Sbjct: 122 SHTHASMAALMNDSESLGRWASGLMSRQYDTGARLSAEKQGLTVALAVDAVM-------- 173

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274
               +K  +G + ++G    L +P +D  ++  Q             + D          
Sbjct: 174 --TAEK-GEGGWTITGRGLPLPAPAADLILVRGQTTANGPPQAETCFVIDRYAAASS--- 227

Query: 275 LKNKIGNRSNAT---VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
                G R + +      +F+N     +G        + ++  L+ LD A++    M+ +
Sbjct: 228 -----GLRLSISDGAAHCDFANVPAQPIGRPGDGADVMAELTTLLRLDRAVIEAGTMKAA 282

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           ++ A   A                 RA+AD ALD+AAA AL+ RLA SFD A     EA 
Sbjct: 283 ISRAAETAHNDAQL-----------RALADAALDVAAAHALALRLAASFDRAADDPVEAG 331

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
           YAR+MAP+  +W  ++   V+AE        G   E         +        S  A+ 
Sbjct: 332 YARLMAPVAAFWSGRLLAPVLAEC-------GLTTEP--------AR-------SPAALC 369

Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511
            DV  +  +G    +++   + QDLG SG+    +LR S  +   D G  R   E++A A
Sbjct: 370 DDVAQIARRGPRTVDRVVDRVAQDLGESGEGTANVLRSSREMAVADPGSIRMFMEQLAFA 429

Query: 512 SSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558
           ++AA L R     +A+ F E R      S++ ML  R +A  I+++L
Sbjct: 430 AAAAELQRIAPGILAEAFTETRLGRPWRSSYGMLDARHDAGDILEAL 476


>gi|153005279|ref|YP_001379604.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028852|gb|ABS26620.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 648

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 124/346 (35%), Gaps = 45/346 (13%)

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
           A + A      S+     + L  +P + + + P+I                       LT
Sbjct: 127 ANITALLSAHQSIGVPQPLKLFGSPELKQKYLPRI--------------AKGAISAFALT 172

Query: 204 EKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261
           E   G+D A +++  +   DG  Y ++G K W  +  +++  +++A+         +   
Sbjct: 173 EVHVGSDPARLSTSYEPSPDGKHYVINGSKLWCTNGTIAELLVVMAR---NPKTNAISAF 229

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320
           + +    G+        +G R+ A   + F+N         N+       +KI L  L++
Sbjct: 230 VVEADSEGVEVTHRCRFMGLRALANAAIRFTNVKVPA---ENLIGKEGRGLKIALTTLNT 286

Query: 321 AIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +S     V G +  L  +  ++  R   G  +     +   +A++A    A  +    
Sbjct: 287 GRLSLPAAVVGGGKRFLELSRKWSAARVQWGQEIGKHEAITHKLAEMAATTYAMES-VSD 345

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE--------- 426
           LA S  + K         R+ A   K W    A  ++ E M+  GG GY +         
Sbjct: 346 LAQSLADKKGYD-----IRLEAAAAKEWNTVKAWRLVDETMQIRGGRGYEKASSLAARGE 400

Query: 427 -ERSIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFS 470
            +  + R  R+   N I  GS   M L +    ++K   +   L  
Sbjct: 401 ADPDVERAMRDLRINLIFEGSSEVMHLFMAREAVDKHLQVAGALID 446


>gi|300711837|ref|YP_003737651.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
 gi|299125520|gb|ADJ15859.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3]
          Length = 404

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 118/373 (31%), Gaps = 34/373 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           L   +    L+       +       R       AA   L+    A  + +P   +   +
Sbjct: 45  LREAARERELYAPHLPEEYGGQGLSYRDMLPVFEAAGRSLLGPA-ALRVDAPDEGNMHTL 103

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQK 220
            L  T     +W   + + E                G  +TE    GG+D   + ++ +K
Sbjct: 104 ELFGTDEQKGEWLEPLVAGE-------------ARSGFSMTEPIQGGGSDPKMLETEAEK 150

Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNK 278
             D  + L GHKW+ +    +D  I++A+ +     +      L      G+   R    
Sbjct: 151 EGDE-WILDGHKWWTTQGSEADVLIVMARTDPEAHPYAGCSLFLVPSDTEGVEIVRDIPH 209

Query: 279 IG--NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
           +G      +  E+ +         LLG+ N      +       L   +        +L 
Sbjct: 210 VGGEVTGMSHAEIRYDGVRIPEENLLGERNEGFSHAQQRLGPARLTHCMRYSGMAERALD 269

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
               Y   R   G  L ++  ++  IA+   ++ AA  +    A   D           A
Sbjct: 270 VTKAYVSEREAFGESLGEKQSVRFTIAEAETNLHAARTMVRHAAREIDSGGE-------A 322

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453
           RI   + K +       VI + ++  G +G  ++  IA  Y       ++ G+       
Sbjct: 323 RIPVSMAKVFAANTVQDVIDDCLQLCGANGIGKDLPIADFYENVRQFRLVDGADEVHKRV 382

Query: 454 VLNLLEKGTNLFE 466
           +        +  E
Sbjct: 383 IAREALNDMDPRE 395


>gi|254821120|ref|ZP_05226121.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 401

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+ +      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPGFGSDSAAVATTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVS 305
            G   +   +      G+  +RL++K+G + + T  + F N         G    ++   
Sbjct: 184 QGRAAIKSFVVPREHPGVTVERLEHKLGIKGSDTAAIRFDNVRIPKENLLGNPEIEVGKG 243

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADI 362
              V +         A M+V   R +L E         V          Q         +
Sbjct: 244 FSGVMETFDNTRPIVAAMAVGVGRAALEEIRKILTEAGVEISYDRPAHVQSAAAAEFLRM 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  A+  LS R A   D     S+EA+ ++  A        +M   V  +++E  G +
Sbjct: 304 EADWEASYLLSLRAAWQADNKIPNSKEASMSKAKAG-------RMVTDVTLKSVELAGTA 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E+  + +  R+S    I  G+     L V   L
Sbjct: 357 GYSEQTLLEKWARDSKILDIFEGTQQIQQLVVARRL 392


>gi|118617923|ref|YP_906255.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium ulcerans Agy99]
 gi|118570033|gb|ABL04784.1| acyl-CoA dehydrogenase FadE23 [Mycobacterium ulcerans Agy99]
          Length = 401

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             V   + +TE   G+D AA+++      D  Y ++G K F+++       ++ A ++  
Sbjct: 125 GKVWAAMAITEPAFGSDSAAVSTTATLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKS 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            G   +   +      G+  +RL++K+G + + T  + F N       LLG   +  G  
Sbjct: 184 KGRAAIKSFIVAREHPGVIVERLEHKLGIKGSDTAVIRFDNARIPKDNLLGKPEIEMGKG 243

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIAD 361
               ++   D+    V+ M V +  A     R+ ++              Q         
Sbjct: 244 FSG-VMETFDNTRPIVAAMAVGIGRAALEEIRKILTDAGIDIDYDRPAYTQSAAAAEFLR 302

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  A+  LS R A   D     S+E       A I+K    +MA  V  + +E  G 
Sbjct: 303 MEADWEASYLLSLRAAWQADNKIPNSKE-------ASISKAKAGRMASDVTLKVVELAGT 355

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E+  + +  R+S    I  G+     L V   L
Sbjct: 356 TGYSEQLLLEKWGRDSKILDIFEGTQQIQQLVVARRL 392


>gi|41409286|ref|NP_962122.1| FadE24 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|254776441|ref|ZP_05217957.1| FadE24 [Mycobacterium avium subsp. avium ATCC 25291]
 gi|41398106|gb|AAS05736.1| FadE24 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 463

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 128/362 (35%), Gaps = 32/362 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P    L+ ++   G+        F+ +   ++          +A  + 
Sbjct: 125 PAAHDADEAATYP--RDLIAKAAELGITAINIPEDFDGIAAHRSSVTNVLVAEALAYGDM 182

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G  +          AL    +      + P+ F+ E  P              + + E +
Sbjct: 183 GLALPLLAPGGVASALTHWGSAEQQATYLPE-FAGENVPQ-----------ACVAIAEPQ 230

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
              D   + +   +   G           ++  ++ FI+ AQ++G+   F+V     + S
Sbjct: 231 PLFDPTRLKTTAVRTPSGYRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESS 285

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIM 323
             GL   +    +G R+     +E S     L   L       +   +   L  L  A +
Sbjct: 286 TKGLTV-KADPSMGIRAAELGHVELSGVTVPLGARLGEDEATDDDYSEAIALSRLGWAAL 344

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V      L   + Y + R   G  +  +  +    A+IA+++     +++R A   ++ 
Sbjct: 345 TVGTSHAVLDYVVPYVKEREAFGEPIARRQAVAFMCANIAIELDGLRLITWRGAARAEQG 404

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EAA A+ +              + ++ ++ +GG GY +E  + R YR+  A  + 
Sbjct: 405 LPFAREAALAKRL-------GADKGMQIGSDGVQLLGGHGYTKEHPVERWYRDLRAIGVA 457

Query: 444 LG 445
            G
Sbjct: 458 EG 459


>gi|85705824|ref|ZP_01036921.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
 gi|85669814|gb|EAQ24678.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217]
          Length = 394

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 116/350 (33%), Gaps = 35/350 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +   I +G   ++    F                   +   A       + +   V 
Sbjct: 40  KDFVDALIREGYLAAMIPEEFGGSGLNLTAASVILEEIHRSGCNAAA-CHAQMYTMGTVL 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              +      + P I               +      G+TE   GTD  A+ +  ++  D
Sbjct: 99  RHGSEAQKAAYLPGIADG------------SLRLQAFGVTEPTSGTDTLALKTTARRDGD 146

Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF----LVPRLLED---GSPNGLCYQRL 275
             Y ++G K + S    SD  ++LA+   R         +   L D      +G+  + +
Sbjct: 147 E-YVINGQKIWTSRVEHSDLMVLLARTTPREEAKSKTDGLSVFLIDLRGKVGHGIDIRPI 205

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
              + N +  T E+ F N       L+G+       +        +  A   +   +  L
Sbjct: 206 -RTMINHA--TTEVFFDNLRIPADSLIGEEGKGFRYILSGMNSERILIAAECIGDAKWFL 262

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
                YAR R V G  +     ++  +A     + AA A+ +R A  +D   +   EA  
Sbjct: 263 KTGSDYARERVVFGAPIGVNQGVQFPLARAQAHLMAAEAIVYRAAAMYDAGHNPGVEANT 322

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           A+++A    +   +         M+  GG  + EE  + R +RE+    I
Sbjct: 323 AKLLASEASWEAAEA-------CMQTHGGFAFAEEYDVERKFREARLYQI 365


>gi|121611022|ref|YP_998829.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter
           eiseniae EF01-2]
 gi|121555662|gb|ABM59811.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 385

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 119/388 (30%), Gaps = 38/388 (9%)

Query: 84  LHAYGPGGERWDKVEFHPAW----------HALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133
           L A      R+ +    P +           ALLR     G  C                
Sbjct: 11  LQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPERLGGQGLGCLA 70

Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193
                     A L   +L   +  +  +++    P V   W  K+   E           
Sbjct: 71  AGVIHEEIARADLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGE----------- 119

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EG 251
                 + LTE   G+D A +  +  +  D  Y + G K  +S+   +D  ++  +    
Sbjct: 120 --AICAIALTEPHAGSDAARLRLRIDRDGD-CYVVDGEKTSISAADQADIAVVFGRTGTP 176

Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGP 308
                 V  LL   +  G+  +R  +  G R+     + F N    L   LGD N     
Sbjct: 177 GSAAHGVTALLVPMNTPGITTRRF-DCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQ 235

Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368
           V            +  +S  R +L E   Y   R   G  L     +   +A    ++  
Sbjct: 236 VMQGFDFSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEG 295

Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428
           A  L  +     D+    + EA  A+        W  K+A   I + + C G  GY    
Sbjct: 296 ARLLCLQGLWLKDQGLPHTAEAGMAKW-------WGPKLAYDAIHQCLLCHGHGGYDRG- 347

Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456
            + +  R+     I  G+   M   +  
Sbjct: 348 RMEQRLRDVLGFQIGDGTAQIMKTIIAR 375


>gi|85375698|ref|YP_459760.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84788781|gb|ABC64963.1| probable acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 428

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 129/440 (29%), Gaps = 44/440 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG----E 92
           ++    L    A     +  E+  L          +  R  ++           G    E
Sbjct: 3   FTIPQELEDYYAELEKFIEDEIIPL------EQQDDNIRFFDHRREWARTDFEAGGLPRE 56

Query: 93  RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI----RAA--RLYLMAQL 146
            W+ +          RR+   G       + +               R A   L L   L
Sbjct: 57  EWEALLV-----EAKRRADKAGHWRFSAPKKYGGKDGSNLWMAVIRDRFAQRGLGLHNDL 111

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           +  H +  +     M     T    +++   I              + +  +  GLTE  
Sbjct: 112 QNEHSIVGNFPFVEMYEQWGTEEQKQEF---ILGG----------FEGTRRVAFGLTEPD 158

Query: 207 GGTDIAAITSQGQK---ISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRL 261
            G+D   + ++  +        + ++G K +++         M  + +G  G    +  L
Sbjct: 159 HGSDATHMETRAVRETRDGVDGWLINGEKMWITGMHVATHCAMFCRTDGEDGDARGITCL 218

Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYL 318
           L      GL  +       N       L   + +     +LG   +     +       +
Sbjct: 219 LVPNPTEGLEIEEWMWTF-NMPTDHPRLSVKDVWVPESAMLGREGLGLALAQSFVHQNRI 277

Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
             A  S+   +  + E++ YAR R   G  L     ++  + ++A        L ++ A 
Sbjct: 278 RQAASSLGAAQFCVEESVKYARERKPFGEELAKNQAIQFPLVELATQCEMLRLLIYKTAW 337

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
             D       E   +     +  YW  ++       AM+  GG GY   +     YR   
Sbjct: 338 EMDNMPHAEIEKTISDK-VSMCNYWANRLVCQAADRAMQVHGGIGYSRHKPFEHIYRHHR 396

Query: 439 ANSILLGSGNAMVLDVLNLL 458
              I  G+    +  V   L
Sbjct: 397 RYRITEGAEEIQMRKVAAYL 416


>gi|254245442|ref|ZP_04938763.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124870218|gb|EAY61934.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 401

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 116/366 (31%), Gaps = 36/366 (9%)

Query: 89  PGGERW----DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM- 143
             G+ +    D+    PA           G      D ++              R     
Sbjct: 36  RFGDDYWLERDRAGGFPA--DFHAALAEAGWLGIAMDPAYGGAGLGMTEAALMMRTISAS 93

Query: 144 -AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
            A L     +  ++   + V +         + P             P+          +
Sbjct: 94  GAGLSGASAVHMNIFGLNPVQVFGNDAQKARFLP-------------PLIAGRDKACFAV 140

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   G D   +T+Q ++  D         W  ++ +++  +++A+             +
Sbjct: 141 TEPDAGLDTTHLTTQARRDGDHYVLSGRKIWISTAQVANKMLIIARTTPLDQVAKPTDGL 200

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315
                D   + +  + ++ K+G ++  +  L   N   +   L+G+       +      
Sbjct: 201 SLFYTDLDRSRVEVREIE-KMGRKAVDSNMLFIDNLRVSRDDLIGNEGDGFRYLLHGLNP 259

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   + +L  A  YA  R V G  +     ++  +A   + + AA  +  +
Sbjct: 260 ERILIAAEAIGLGQAALRRATQYACERVVFGRPIGQNQSIQHPLAQAWMQLEAAWLMVMK 319

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A  +D  +S   EA  A+ +     +  C+ A       +   GG G  +   + R+ R
Sbjct: 320 AATRYDAGQSCGAEANAAKYLGAEAAFQACQTA-------IATDGGMGDAKGYHVERYLR 372

Query: 436 ESPANS 441
           E     
Sbjct: 373 ECMIPR 378


>gi|194292231|ref|YP_002008138.1| cyclohexanecarboxyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG
           19424]
 gi|193226135|emb|CAQ72082.1| Cyclohexanecarboxyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG
           19424]
          Length = 383

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 111/357 (31%), Gaps = 26/357 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
            AL+R     G         +                   A L   ++   +  +  ++A
Sbjct: 39  RALMREMGEMGFIAPELPEHYGGQGMGSLAAGVIHEAVARADLSLSYINLLASLNGQILA 98

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
               P +   W  ++   E               + + LTE RGG+D A++  + ++  D
Sbjct: 99  HHARPEIAGPWLQRLTRGE-------------ALLAIALTEPRGGSDAASLRLRMERDGD 145

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
                       ++  +DA ++ A+      G   V  LL      G+   R  +  G R
Sbjct: 146 HYVLNGEKTSISAADQADAAVVFARSGSVEAGARGVSALLVPMDLPGITRNRF-DCHGQR 204

Query: 283 SNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           +     + F N       LLG        V            +  ++  + +L E   Y 
Sbjct: 205 AIGRGSIFFENVRVPASHLLGKEGEGFVQVMQGFDFSRALIGLQVLAVAQAALDETWEYV 264

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L     +   +AD    +  A  L  +     D     + EAA  +  AP 
Sbjct: 265 AGRQAFGKPLSAFQGVSHPLADFETQVQGARLLCLQTLWLKDRGLPHTAEAAMCKWWAP- 323

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
                 K+A  V+ + +   G  GY     + +  R+     I  G+   M   +  
Sbjct: 324 ------KLAYDVVHQCLLSFGHGGYDRG-VMEQRLRDVLGFQIGDGTAQIMKTIIAR 373


>gi|297571910|ref|YP_003697684.1| acyl-CoA dehydrogenase domain protein [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296932257|gb|ADH93065.1| acyl-CoA dehydrogenase domain protein [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 377

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 106/285 (37%), Gaps = 15/285 (5%)

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233
              +  S E      A +          +TE   G+    + +   +  DG   L+GHK 
Sbjct: 95  GLMRECSPEQQEKFLAYLGTGEQIYNFAMTEPSAGSSWDDMQTTYTRR-DGKVYLNGHKT 153

Query: 234 FLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292
           F +S M   + I++A+    +  +     + D S  G+  + L  K+G R ++  EL F 
Sbjct: 154 FQTSSMKVPYMIVMARNSEDMSVY--TEWVVDMSKAGVTREPLA-KLGLRMDSLAELYFD 210

Query: 293 NTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349
           N                +  +K         A+ +      +  +A  YA +R   G  L
Sbjct: 211 NVELEESDIFGTEGNAFMRGVKDFDQERFLVALTNYGTALCAFEDAAKYANQRIQGGKPL 270

Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409
               +++   AD+ + I     + + +A      +         R    + KY+C + + 
Sbjct: 271 AAHQLIQLKFADMKVAITNMRNMLYEIAWKQGRGE-------LGRGDCSMAKYYCSQAST 323

Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
            VI ++++ + G     E  + R YR+   + I  G+   M+L  
Sbjct: 324 MVIDQSLQVLSGVAITGEHRLQRFYRDIRVDRISGGTDEMMILTA 368


>gi|253682764|ref|ZP_04863559.1| crotonobetainyl-CoA dehydrogenase [Clostridium botulinum D str.
           1873]
 gi|253560963|gb|EES90417.1| crotonobetainyl-CoA dehydrogenase [Clostridium botulinum D str.
           1873]
          Length = 384

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 127/380 (33%), Gaps = 33/380 (8%)

Query: 89  PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
           P  +  DK   HP   W  L                 F   + + A+            +
Sbjct: 27  PYFQECDKNHEHPEKWWDILRDLGC------------FSMFLPENAYSEDGEPGGGEGAV 74

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               +M       + + L     V  D   +  ++E          K   A   G +E  
Sbjct: 75  TMFLVMEALGRCGAPIYLF-WDHVKADALLENGTKEQIDKFMPMFFKGESAYAQGFSEPN 133

Query: 207 GGTDIA--AITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLE 263
            GTD++  AI +   +  +G   ++GHK F+S    +D  + LA+         +     
Sbjct: 134 AGTDLSSNAIETTYTRK-NGKVYINGHKHFISGAQGNDYCLTLAKNSDNP--EQLTLWFV 190

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDS 320
             +   +  + ++ K+G       ++ F N         +    G +   K      L  
Sbjct: 191 PTNVPNVKKEPME-KMGLNMENVNDIWFDNVEVEESDMFSFEGNGLMATSKGFDYERLID 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A  +      +  +A  YA +R V G  +    +++  I ++ + I     L    A + 
Sbjct: 250 AFNAYGQALCAYEDACRYANQRLVKGKEIGRLQLIQNHIMEMTMRIETMRNLLLHYAWNK 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D      EE       A I K +C + A  V   AM+ + G G+     ++R YR+    
Sbjct: 310 DNDCLTREE-------ASIAKQYCSESANEVADHAMQVLAGIGFC-GSRVSRIYRDLRIT 361

Query: 441 SILLGSGNAMVLDVLNLLEK 460
            I  G+G    +     + K
Sbjct: 362 RISGGTGEIQTVIASRQILK 381


>gi|330931569|ref|XP_003303454.1| hypothetical protein PTT_15669 [Pyrenophora teres f. teres 0-1]
 gi|311320540|gb|EFQ88445.1| hypothetical protein PTT_15669 [Pyrenophora teres f. teres 0-1]
          Length = 444

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 112/356 (31%), Gaps = 31/356 (8%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170
            H  L    W     P     +    +    +M  +           +       T P  
Sbjct: 73  FHSALAAGGWLGIALPTRYGGSGLGISEATMMMQTISESGAGMAGAQAVHGNVYATQP-- 130

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
                 +  S E        + K  V +  G+TE   G D   + ++  +  D       
Sbjct: 131 ----LIRHGSAEMCENLVPRIVKGEVRVCFGVTEPGSGLDTLGLRTRAVREGDEYVVSGD 186

Query: 231 HKWFLSSPMSDAFIMLAQVEG-----------------RVGCFLVPRLLE--DGSPNGLC 271
             W  ++ ++   I+LA+                    R     +       D +   L 
Sbjct: 187 KVWITAAQVAGVMILLARTGDGDHDAGGEDGKSKNGGRRSRSHGLSLFSIPLDRTNPALE 246

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
            +R+  K+G R+    ++ F         L+G  N     +           A  ++   
Sbjct: 247 IRRI-RKMGGRAVDANQVFFDKYRVPASSLIGAENHGFKIILQGMNAERCLLAGEALGLG 305

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-- 386
             +L+ A  YAR R V    +     +   +AD  + + AA   ++  A  +DE++    
Sbjct: 306 YCALSRAAEYARTRDVFNRPIGMNQGIAHPLADAYMALEAAKLATYHAARLYDESQQEGS 365

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +       + A   KY   + A      A+   GG GY EE  + R +RES    I
Sbjct: 366 TVTQDVVGVAANSAKYLAAEAAFRACERAVLTHGGMGYAEEYDVERWFRESLVPRI 421


>gi|37077871|sp|Q9KJE8|BBSG_THAAR RecName: Full=(R)-benzylsuccinyl-CoA dehydrogenase
 gi|9622537|gb|AAF89842.1|AF173961_8 benzylsuccinyl-CoA dehydrogenase [Thauera aromatica]
          Length = 406

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 117/376 (31%), Gaps = 31/376 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGHLMSPSVTSASM 161
            L++ +   G      D            K          L+     G  + P   +   
Sbjct: 53  RLMKITQEMGFWGIEVDEKLGGQGLGMFAKTLVVEEMSKSLIGFSHHGFTLPPDAPNLYY 112

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +    +P     +  +    E D               +  TE   G+DI+ +T+   + 
Sbjct: 113 LEECGSPAQRDKYVRRYCRGEID-------------SAMMATEPGAGSDISGLTTTAVRE 159

Query: 222 SDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNK 278
            +G + ++G K F+S    D   FI +A  +            + D    GL        
Sbjct: 160 -NGQWVINGSKIFISKCDKDELFFICIAVTDKEAPTKRRFTAFILDKDTPGLRIGAEIPV 218

Query: 279 IGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           IG  +  T  +   N       +LG++  +  P+++   +  ++ A          +   
Sbjct: 219 IG--AMPTWSVYLDNVRVGDEAVLGEVGDAFIPLQNRFGVRRIELAAHCTGMAERLIQMM 276

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I  A  R   G  L D+  ++  IAD  +++       +  A   D+           R+
Sbjct: 277 IDQANLRKTFGVALADRQTVQNWIADSTIELEQVRLQLYFTAWKSDQGHKD------LRL 330

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
            A   K    +M   V   A++  GG G   E  I    R      ++ G+     + + 
Sbjct: 331 EAASLKIAATEMLTRVADRAIQLHGGLGLSREMGIEYVARMVRIWRVVEGASEIHRMSIA 390

Query: 456 NLLEKGTNLFEQLFST 471
             L      +    + 
Sbjct: 391 KKLLTDGRTYSPFVAA 406


>gi|67526845|ref|XP_661484.1| hypothetical protein AN3880.2 [Aspergillus nidulans FGSC A4]
 gi|40739955|gb|EAA59145.1| hypothetical protein AN3880.2 [Aspergillus nidulans FGSC A4]
 gi|259481552|tpe|CBF75178.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 458

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 70/452 (15%), Positives = 130/452 (28%), Gaps = 59/452 (13%)

Query: 49  NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE---FHPAWHA 105
            +P  +   L  L  ++ S T   L    + N  +   +     R +  +       W  
Sbjct: 4   EYPPDLVAHLASLDSFIRS-TILPLQHQDDNN--RFFDHRREYARTNWEKGGLPRKEWEE 60

Query: 106 LLRRSI----HDGLHCSIWDRSFEPVVRK-------------QAHKIRAARLYLMAQLEA 148
           LL ++       G +     + +                    +H +    L L   L+ 
Sbjct: 61  LLNKARVLADAAGFYRFALPKIYGGTSHPRTNLYMSAIRFHLASHPVYGGGLGLANDLQN 120

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
            H +  +     M+    +    +   P     E+  T              GLTE   G
Sbjct: 121 EHSIVGNFPDLFMLHHFGSEEQKRTLIPARLCGEFRTT-------------FGLTEPDHG 167

Query: 209 TDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLL 262
           +D   +++  Q+  +     G       KW   +      I+ A+  G  G    +   L
Sbjct: 168 SDATFMSTVAQRKRNSDGVEGWEINGSKKWQTGAHHCTHMIIFARTSGESGSARGITAFL 227

Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLD 319
                 G+     +    N       +  +  F      L          +       + 
Sbjct: 228 VPAHTKGIEVTSYEWTF-NMPTDHATVTLNGVFVPHSAILGKLDNGLAIAQTFVHENRIR 286

Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLA 377
            A  S    +  L  AI  A  R + G    L +   ++  + ++   +     L  R +
Sbjct: 287 QAASSCGAAKYCLDRAIERANSRTIWGEGRKLSEHQGIQFPVVELMTQVEMLRLLILRTS 346

Query: 378 NSFDE-----AKSRSEEAAYARIM------APITKYWCCKMAPAVIAEAMECIGGSGYIE 426
              D+      K+  ++  + RI         +  YW  ++A      A++  GG GY  
Sbjct: 347 VRMDDIVSECEKTGGKDVPWVRIEKELSGEVAMCNYWANRLACQAADRAIQIHGGDGYSR 406

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  YR      I  GS    +  V   L
Sbjct: 407 HYPFEHIYRHFRRYRITEGSEEIQIRKVAAYL 438


>gi|330504320|ref|YP_004381189.1| acyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
 gi|328918606|gb|AEB59437.1| acyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
          Length = 387

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 127/380 (33%), Gaps = 38/380 (10%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            + D+ + F  A+   +      G   ++    +       A +       +        
Sbjct: 29  RKIDEEKGFPEAFVTAMT---EAGWLSAMIPEEYGGSGLGLA-EASVILEEVNHCGGNSG 84

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   + +   +    +    + + PK+ S E                 +G+TE   GTD
Sbjct: 85  TIHGQMYNMFTLLRNGSEEQKRYYLPKLASGELR------------LQSMGVTEPTTGTD 132

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED-- 264
              I +   K  D         W      SD  I+LA+       +     +   L D  
Sbjct: 133 TTKIKTTAVKKGDKYVINGQKVWISRVQHSDLMILLARTTPLAEVQRKSEGMSIFLVDLR 192

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  Q + N + N    T EL F N       L+G+       + D         
Sbjct: 193 EAIGNGLTVQPIAN-MVNH--ETNELFFDNLEIPASSLIGEEGKGFRYILDGLNAERTLI 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + ++  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 250 AAECIGDGRWFIEKSAQYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++    A  A+ +A    +             ++  GG G+  E  + R +RE+   
Sbjct: 310 DAGRNAGAAANMAKYLAAKASW-------EAANACLQTHGGFGFANEYDVERKFRETRLY 362

Query: 441 SI-LLGSGNAMVLDVLNLLE 459
            +  + +   +     +LLE
Sbjct: 363 QVAPISTNLILSYVAEHLLE 382


>gi|301616693|ref|XP_002937783.1| PREDICTED: acyl-CoA dehydrogenase family member 11-like isoform 1
           [Xenopus (Silurana) tropicalis]
          Length = 780

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 108/366 (29%), Gaps = 34/366 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L   +  +GL                A           A  E  +  +P   +  ++ +
Sbjct: 423 KLKEMAKAEGLWNLFLPAISSLSQTDYAFIAEETGKCFFAP-EVFNCQAPDSGNMEVLHM 481

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISD 223
             T    K W   + S +                   +TE     +D   +    Q+  D
Sbjct: 482 YGTEEQKKKWLEPLLSGQIQ-------------SCFCMTEPDVASSDATNMECSIQRDGD 528

Query: 224 GIYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFLV--PRLLEDGSPNGLCYQRLKNK 278
             Y ++G KW+ S          I++ + +  +         ++      G+   R    
Sbjct: 529 -SYVINGKKWWSSGAGNQSCQVAIVMGKTKNTLASKYKQHSMIIVPMETKGVEVVRALKV 587

Query: 279 IG----NRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            G           E+ F N    +              +       +   + ++     +
Sbjct: 588 FGYEDTQHGGH-FEVHFKNVRVPVSNLILGEGRGFEIAQGRLGPGRIHHCMRTIGAAESA 646

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L      + +R   G  L    V+   IA+  + I  A  L+   A + D     +  +A
Sbjct: 647 LQLMCERSAQRQTFGKKLYQHEVVLHWIAESRIAIEQARLLTLSAARAID-----TVGSA 701

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+    + K    +MA  V   A++  GG+G  ++  +A  Y       I  G     +
Sbjct: 702 RAKKQIAMIKVVAPRMACKVADRAIQVFGGAGVSQDFPLASMYAAIRTLRIADGPDEVHL 761

Query: 452 LDVLNL 457
             +  L
Sbjct: 762 SAIAKL 767


>gi|303320185|ref|XP_003070092.1| electron transport oxidoreductase, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109778|gb|EER27947.1| electron transport oxidoreductase, putative [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 468

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/416 (14%), Positives = 118/416 (28%), Gaps = 64/416 (15%)

Query: 93  RWDKVEFH-PAWHALLRRSIH----DGLHCSIWDRSFEPVVRK-------------QAHK 134
            WD        W  LL ++       G +     + +                    +H 
Sbjct: 47  DWDNGGIPRKEWDQLLAKARALADKAGFYRFALPKVYGGQANPSSNLWMCAIRYHLASHP 106

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           I    + L   L+  H +  +     M+         +   P      +  T        
Sbjct: 107 IYGGGVSLANDLQNEHSVVGNFPDVLMIHHFGNEEQRRTLIPARLQGHFRTT-------- 158

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKIS-----------DGIYCLSGHKWFLSSPMSDAF 243
                 GLTE + G+D   + ++ +              DG       KW   +      
Sbjct: 159 -----FGLTEPKHGSDATYMETRARPARGEYPPQSGHMVDGFVLDGAKKWQSGAHHCTHM 213

Query: 244 IMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
           ++ A+  G+ G    +   L   +  G+     +    N       +   + F     +L
Sbjct: 214 LIFARTSGKPGSSRGITAFLVPRNTPGVEIVSYEWTF-NMPTDHATIAIDSVFVPRSAVL 272

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+++      +       +  A  S    +  L  +I YAR R+V G  L +   ++  +
Sbjct: 273 GEVDAGLAIAQTFVHENRIRQAASSCGAAKFCLDRSIEYARSRNVFGKALAENQAIQFQV 332

Query: 360 ADIALDIAAATALSFRLANSFDE-----------------AKSRSEEAAYARIMAPITKY 402
            ++   +     L  R     D+                  K   E          +  Y
Sbjct: 333 VELMTQVEMLRLLILRTGWEMDKIVAECGGHADGPVPTGSKKPWVEIEKRLSDKVAMCNY 392

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           W  ++       A++  GG+GY   +     YR      I  GS    +  V   +
Sbjct: 393 WANRLCCQAADRAIQIHGGNGYSRHQPFEHIYRHFRRYRITEGSEEIQMRKVAAYI 448


>gi|239817673|ref|YP_002946583.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
 gi|239804250|gb|ACS21317.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110]
          Length = 389

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 120/358 (33%), Gaps = 34/358 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAGHLM 152
           D+  F    H   R     G        +         +A  +  A     A +     +
Sbjct: 33  DRAAFP---HEFHRAVADSGWLGIAMPEAQGGAGLGITEAALMMRAISASGAGMSGASSV 89

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             ++   + V +  +    + + P             P+   +      +TE   G D  
Sbjct: 90  HMNIFGLNPVVVFGSEAQRQRFLP-------------PLIAGTEKACFAVTEPDAGLDTT 136

Query: 213 AITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSP 267
            + +Q  +  +G Y L G K W  ++ ++D  ++L +       +     +         
Sbjct: 137 RLKTQAVRQPNGSYLLHGRKIWISTAQVADRMLILTRTTPLDQVKKPTQGLTLFYTPLDR 196

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMS 324
             +  + + +K+G  +  +  L            +G+       +        +  A  +
Sbjct: 197 AKVEVREI-HKLGRAAVDSNMLFIDGLEVPEEDRIGEEGRGFEYILHGLNPERILIAAEA 255

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R +L  A  YA+ R V G  +     +   +A    ++ AA  + F+ A  +D  +
Sbjct: 256 IGIGRAALRIAAQYAQERVVFGRPIGQNQGVAHPLARAWANLEAADLMVFKAATLYDAGE 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               EA  A+ +A    +  C+ A       +  +GG GY +E  + R  RES    I
Sbjct: 316 PCGIEANAAKYLAAEAAHDACQNA-------VLTLGGMGYAKEYHVERLLRESYIPRI 366


>gi|262204624|ref|YP_003275832.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia
           bronchialis DSM 43247]
 gi|262087971|gb|ACY23939.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
           43247]
          Length = 397

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 124/334 (37%), Gaps = 40/334 (11%)

Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196
           AAR      +     +       + +A +      + +                     V
Sbjct: 83  AAREMSWGDVGLFLTIPGQGLGNAAIAAVANDEQLERF-------------------GDV 123

Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255
              + +TE   G+D AA+++      D  Y ++G K F+++   +D  ++ A ++  +G 
Sbjct: 124 WAAMAITEPSFGSDSAAVSTTATADGDD-YLINGEKIFVTAGSRADHVVVWATLDKSLGR 182

Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPVEDM 312
             +   +      G+   RL++K+G +++ T  + F N        L    + T      
Sbjct: 183 AAIKSFVVPMDTEGVTVARLEHKLGIKASDTAVVRFENARVPKENLLGSPEIDTKKAFGG 242

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGIL-IDQP-VMKRA----IADIAL 364
            ++   D+    V+ M V L  A     RR +  +G  +  D+P   + A       I  
Sbjct: 243 -VMQTFDNTRPVVAAMAVGLGRASLEELRRILEDAGHTIDYDKPAAAQHASVCEFIRIES 301

Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424
           D  A+   + R A   D  +  S EA+ ++  A        +M   +  +A+E  G +G+
Sbjct: 302 DWEASWLHTLRAAWMADNKQPNSAEASMSKAKAG-------RMVTELTNKAVEVGGTAGF 354

Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            E   + +  R++    I  G+     L +   +
Sbjct: 355 SETSLLEKWARDAKILDIFEGTQQIQQLIIARRV 388


>gi|189195870|ref|XP_001934273.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980152|gb|EDU46778.1| medium-chain specific acyl-CoA dehydrogenase, mitochondrial
           precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 415

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 101/332 (30%), Gaps = 23/332 (6%)

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
           + A  L L   L+  H M  +     M+         ++  P     ++           
Sbjct: 80  LAAKGLGLFNDLQTEHSMVGNFPDVVMLMNFGNAHQKEELIPLRLQGKFR---------- 129

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFI-MLAQVE 250
              +  GLTE   G+D   + ++G+         + L+G+K + +         + A+  
Sbjct: 130 ---MTFGLTEPGHGSDATHMATKGRPQTRNGVKGWLLNGYKRWQTGMHHATHCSVFARTS 186

Query: 251 GRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VST 306
            + G    +   +      G+  +  +  + N       +   + +      L       
Sbjct: 187 EKDGEVKGISCFIVPVETPGIKAESYEWTL-NMPTDHATVSIKDVWVPESAALGPIHNGL 245

Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366
           G  +       +  A  S+      + +++ YA  R   G  L     ++  + ++A   
Sbjct: 246 GVAQAFVHENRIRQAASSLGAAVYCVQQSVEYANDRAPFGTPLSHNQGIQFPLVELATQC 305

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
                L  + A   D       E         +  Y+  ++       A++  GG+GY  
Sbjct: 306 EMLRLLIRKTALEMDSMPHNEIERKIGDK-VSMCNYYANRLCTEAADRAIQVHGGNGYSR 364

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                  +R      I  GS    +  V   L
Sbjct: 365 HYPFEHIWRHHRRYRITEGSEEIQMRKVAAYL 396


>gi|251796773|ref|YP_003011504.1| acyl-CoA dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247544399|gb|ACT01418.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. JDR-2]
          Length = 365

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 136/379 (35%), Gaps = 46/379 (12%)

Query: 68  CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127
               EL R+A  +  +     PG    D++E      +L       GL        +   
Sbjct: 6   EEEYELTRVAVRDFAE-SELAPGAVDRDELERFD--RSLFDNMAAMGLTGIPIAEEWGGA 62

Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187
                                  ++     +A ++A   +  + +             T 
Sbjct: 63  GSDVLVYTIVLEELARVCASTSAVLEAHTAAAWVLAKHGSDNLRE-------------TK 109

Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI 244
             P+   +    +  +           T +G+++   IY L G     S   + ++D ++
Sbjct: 110 LMPLTTGNRLGTIVYSHP---------TLRGKRLGKDIYKLDGSL--SSVELAGIADDYV 158

Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            L +         +   +  G   G+  +  ++K+G R     EL F +    L   +  
Sbjct: 159 GLIK----HQTGGLSIGVVSGDSPGIACEPSESKLGLRGMPNAELRFQSVNCSLFNAVKE 214

Query: 305 STGPV-----EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           ++G         + ++  + +A  +    + +L  A+ YA+ R   G  +  Q  +   +
Sbjct: 215 NSGAGARDIFNGINVMRDIGAAAQATGIAQGALDAALAYAKERTQFGKPIGRQQGIAFKL 274

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           AD+A ++ A+  L +  A S D+  S S +AA A       K +  K A A   EA++  
Sbjct: 275 ADMAANVEASRWLVYDAAWSIDKGLSGSAKAAMA-------KLYGIKHAVATAIEAVQVF 327

Query: 420 GGSGYIEERSIARHYRESP 438
           GG GY+ E  + R+ R++ 
Sbjct: 328 GGYGYMREYRVERYLRDAK 346


>gi|197122848|ref|YP_002134799.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
 gi|196172697|gb|ACG73670.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K]
          Length = 648

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 143/397 (36%), Gaps = 47/397 (11%)

Query: 94  WDKV-EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
            D+  E+ P     LR+    G+     +       + +  K+ A      A L A    
Sbjct: 78  IDETGEYPPHVMDGLRKLGAFGM-KIPVEYGGLGFDQVEYGKVMALLGSWDANLTALLSA 136

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
             S+     + L  +  +   + P+I                       LTE   G+D A
Sbjct: 137 HQSIGVPQPLKLFGSAALKHKYLPRI--------------ARGAVSAFALTEANVGSDPA 182

Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
            + +  ++  DG  Y L+G K W  +  +++  +++A+         +   + + +  G+
Sbjct: 183 RLATTAERSPDGTHYVLNGSKLWCTNGTLAELLVVMAR---DPKTDAISAFVVETAWPGV 239

Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV---- 325
                   +G R+ A   L F++         N+       +KI L  L++  +S+    
Sbjct: 240 EVTHRCRFMGLRAIANAALRFTDVKVPA---ENLIGKEGRGLKIALTTLNTGRLSLPAAV 296

Query: 326 -SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
             G++ +LA +  +A  R   G  +     +   +AD+A    A  A+S    +  D   
Sbjct: 297 SGGVKNALALSRTWAAARVQWGQEIGKHEAITHKLADMASTAYAMEAVSDLAQSLADH-- 354

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----------SIARHY 434
               E    R+ A   K W    A  +I E M+  GG GY  ER           + R  
Sbjct: 355 ----EGYDIRLEAAAAKEWNTVQAWRLIDETMQIRGGRGYETERSLAARGETPVGVERWM 410

Query: 435 RESPANSILLGSGNAMVLDVLN-LLEKGTNLFEQLFS 470
           R++  N I  GS   M L +    ++K   +   L  
Sbjct: 411 RDARINLIFEGSSEIMHLFMAREAVDKHLQVAGALID 447


>gi|226308729|ref|YP_002768689.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226187846|dbj|BAH35950.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
          Length = 393

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 127/362 (35%), Gaps = 41/362 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVR---KQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            +   +   G+        +         +A     A   L     A ++ +P   +  M
Sbjct: 38  EMQAAAKEAGVFAPHAPIEYGGHGLNMSDRAPVFEEAGYSLFGP-TALNIAAPDEGNVHM 96

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +A +      + +              AP+    +     +TE     G+D +A+ ++ +
Sbjct: 97  LAHVANEAQKQQFL-------------APLASGDMRSAFAMTEPAPGAGSDPSALNTRAE 143

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKN 277
           K+  G + ++G KWF++    +  FI++A+  G  G        L      GL   R  +
Sbjct: 144 KVPGG-WKINGKKWFITGADGAGFFIIMARTSGEPGQRGGATMFLTPTDTAGLIVGRHID 202

Query: 278 -----KIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
                 IG       E+ F + F     +LG+++      +       +   +  +   R
Sbjct: 203 TLDKAMIGGH----CEVTFEDLFVPDEAVLGEVDQGFAYAQVRLGPARMTHVMRWLGAAR 258

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
                A+     R   G  L D  ++++ +AD  +DIAA+ AL  +     D+       
Sbjct: 259 RGHDVAVARVAEREGFGSKLGDLGMIQKMVADNEIDIAASRALLVQACFELDQG------ 312

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
             +A     I K +  +    ++  +++  GG G   +  +AR  RE     +  G    
Sbjct: 313 -GHASNATSIAKTYAAEAIFRIVDRSIQMCGGMGVSGDLPLARLSREVRPFRVYDGPSEV 371

Query: 450 MV 451
             
Sbjct: 372 HR 373


>gi|288923113|ref|ZP_06417262.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345553|gb|EFC79933.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
          Length = 282

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 87/284 (30%), Gaps = 27/284 (9%)

Query: 75  RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134
           R A  +  +     P     D+ E +P         I  G        S++         
Sbjct: 18  REAVRDLAE-KEIAPFAADVDEQERYPT--EARDALIRSGFSAVHIPESYDGQGADSVAT 74

Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                    A   +  + + +      + L  +  + K   P I S E            
Sbjct: 75  CIVIEEVARACASSSLIPAVNKLGTMPILLSGSEELKKQVLPSIASGE------------ 122

Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252
             +    L+E+  G+D A++ ++ +   D         W  ++  S  + ++A  +    
Sbjct: 123 -ASASYALSEREAGSDTASMRTRARLDGDHWVLNGTKTWITNAGESTWYTVMAVTDPDAA 181

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
                +   +      G      + K+G + + T E+ F N          +   P   +
Sbjct: 182 KPADGISAFVVRADDPGFEVGSKERKLGIKGSPTREIHFVNCTIPAD---RIIGEPGTGL 238

Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
           +  +  LD    ++    V +A+     AI Y + R   G  + 
Sbjct: 239 RTALRTLDHTRPTIGAQAVGIAQGALDAAIGYVKERRQFGRPIA 282


>gi|323530213|ref|YP_004232365.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323387215|gb|ADX59305.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1001]
          Length = 381

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 121/356 (33%), Gaps = 29/356 (8%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTSASMV 162
             + R+    GL                   + A   + L+    A  + + +       
Sbjct: 39  FDVARQLAEQGLLGITMKEEDGGQGGTLMDAVIAIQEIALVCPKSADIVQAGNFGPIRTF 98

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               TP   K +   +                   I LG+TE   G+ +  + +  ++  
Sbjct: 99  VEYATPEQKKRYLADLLGG-------------RKVISLGMTEPGAGSAVTQLKTSARREG 145

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
           D  Y ++G K F +  P ++ F++  +     G   +  +L +    G    +  + +  
Sbjct: 146 DA-YVINGTKIFSTHSPDANLFLVYCRF--GPGVENIGSVLIEKGTPGFTVGQPSSFMSG 202

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLAEAIHYA 339
                 +L            L    G  +      +  + +A  +++  R +   A  +A
Sbjct: 203 EEW--SQLYIEECRIPAENVLLGPGGFKKQISGFNVERVGNASRALALGRYAFNTAREHA 260

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G +L +   ++   AD+AL + A+  L +R AN  +     + + A A+    +
Sbjct: 261 LMREQFGRLLCEFQGIQWKFADMALKLEASQLLLYRAANVSNGQLPSAYDTAIAKAHCNM 320

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
           T          V  EA++ +GG GY +E  +    R +    I  GS   +   + 
Sbjct: 321 T-------GFDVSNEALQVMGGMGYSQESLVEYCVRRTRGWMIAGGSIEVLKNRIA 369


>gi|119961497|ref|YP_946318.1| glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
 gi|119948356|gb|ABM07267.1| putative glutaryl-CoA dehydrogenase [Arthrobacter aurescens TC1]
          Length = 405

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 122/368 (33%), Gaps = 34/368 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF     A + +    GL      + F+ ++  +  +   +   L+       +  
Sbjct: 62  WNREEFPFGLLADMAKFGLGGLQTDGSSKLFKGLMYTEIARADVSLSALVGIHNELIVG- 120

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                  M+  + +    + W P +             +  +      LTE   G+DIA 
Sbjct: 121 -------MIHELGSDEQKRKWLPGL-------------EAFTQLGAFALTEPDHGSDIAG 160

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            +++  ++           +W  +  ++D  ++ A+             + +    G   
Sbjct: 161 GLSTTARRDGGEWVINGAKRWIGAGTIADFALVWARDLADGHIKG---FIVETDRPGYSA 217

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--VEDMKILIYLDSAIMSVSGMRV 330
            ++ NKIG R      +        L   L  +T      D+           +      
Sbjct: 218 TKISNKIGLRIMQNAAIVLDEVRVPLENLLPGATEFSRANDLLRDSRAWVGWQAAGIQLA 277

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +   A  YA  R   G  L    ++++ +ADI  +  A+ ++   LA      K    +A
Sbjct: 278 AFDIARSYALERKQFGKELARFQLVQQQLADILGNANASLSMMVELARIQQAGKLEMVQA 337

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  +           ++A + ++     +GG+G   +  +A+ + ++       GS    
Sbjct: 338 AMCKATT-------TRLARSSVSMGRSLLGGNGITTDYEMAKLFGDAEILYTYEGSYEIN 390

Query: 451 VLDVLNLL 458
            + V   +
Sbjct: 391 SMIVARAV 398


>gi|254773886|ref|ZP_05215402.1| FadE10 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 642

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/430 (17%), Positives = 143/430 (33%), Gaps = 54/430 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
             +R     G         F  +   Q    RA  +        G L+S   S+     +
Sbjct: 85  EYVRGLADLGCFGMKIPSEFGGLNMSQVAYNRALMMISSVHPSLGALLSAHQSIGVPEPL 144

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  TP   + + P+  +                     LTE   G+D A + S    + 
Sbjct: 145 KLAGTPEQKRKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPVD 190

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L+G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 191 DGKAYELNGVKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFM 250

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLA 333
           G R                    N+     + +KI L  L++  +S+        + +L 
Sbjct: 251 GLRGIENGVTRLHRVRVPS---ENLIGREGDGLKIALTTLNAGRLSIPASATGSAKWALK 307

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  L +   + R ++ IA  + A  A+    A   DE ++        
Sbjct: 308 IAREWSGERVQWGKPLAEHEAVARKLSFIAATVYALDAVLELSAQMADEGRNDIR----- 362

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSIL 443
            I A + K W  +MA  +  E M+  GG GY   E          ++ +  R+   N I 
Sbjct: 363 -IEAALAKLWSSEMACVIADEVMQIRGGRGYETAESLAARGERAVAVEQVLRDLRINRIF 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            G+   M L +            +         G   K    +   + +        A++
Sbjct: 422 EGASEIMRLLIAR----------EAVDAHLAAAGDLAKPDAGLREKAAAAVGASGFYAKW 471

Query: 504 LTEKIALASS 513
           L + +     
Sbjct: 472 LPQLVFGEGQ 481


>gi|222478659|ref|YP_002564896.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222451561|gb|ACM55826.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 406

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 121/364 (33%), Gaps = 34/364 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           AL   +  +G++       +  +    R+       A   L+    A    +P   +   
Sbjct: 44  ALRDAARDEGIYAPQVAEEYGGLGLGFREMLPVFEEAGRSLLGP-TALRCAAPDEGNMHT 102

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           + +  T    + W               P+    +  G  +TE    GG+D   + +  +
Sbjct: 103 LEIAATDAQKERWL-------------RPLAAAEIDSGFAMTEPMQGGGSDPKMLATTAE 149

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKN 277
           K  D  + + GHKW+ +    ++  ++ A+ +     +     +L     +G+   R   
Sbjct: 150 KDGDE-WVIDGHKWWTTGGVEANLLLVFARTDQEAHPYAGCSVILVPADADGVEVVRNIP 208

Query: 278 KIG--NRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +G         E+ F +    +   LG+ N     V+       L   +        +L
Sbjct: 209 HLGEGLVGTTHAEIRFDDVRVPVENTLGEENEGFTLVQQRLGPARLTHCMRYAGMADRAL 268

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  Y   R   G  L ++   +  IAD   ++ AA  +    A    +      E A 
Sbjct: 269 DIATAYLSEREGFGEPLSEKQGPRFRIADRRTELHAARTMVRHAAGRIADGHEARIEVAM 328

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +   +    I +A++  GG+G   +  IAR +       ++ G+      
Sbjct: 329 A-------KTFAANVTQEAIDDALQFCGGNGIAYDLPIARFHENVRQFRLVDGADEVHRR 381

Query: 453 DVLN 456
            +  
Sbjct: 382 SIAR 385


>gi|111023361|ref|YP_706333.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822891|gb|ABG98175.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 401

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 106/279 (37%), Gaps = 25/279 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+T+      D  Y L+G K F+++   S   ++ A V+  
Sbjct: 125 GKVWASMAITEPGFGSDSAAVTTTAVLDGDE-YVLNGEKIFVTAGERSTHIVVWATVDKT 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
            G   +   +      GL   RL++K+G +++ T  L   +            ++NV  G
Sbjct: 184 KGRAAIKSFVVPRDAPGLSVARLEHKLGIKASDTAVLLLQDCRIPKDNLLGTPEVNVEKG 243

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------ILIDQPVMKRAI 359
               M+     D+    V+GM V L  A     R  +S             +Q       
Sbjct: 244 FAGVMQTF---DNTRPIVAGMAVGLGRAALEELRSILSDAGVEISYDTPAYNQHAAAAEF 300

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
             +  D  AA  L+ R     D  K  S EA+ ++  A        +   A+  +A+E  
Sbjct: 301 LQLEADWEAAYLLALRATWMADNKKPNSLEASMSKAKAG-------RTGTAISLKAVELA 353

Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           G  GY E   + +  R+S    I  G+     L V   L
Sbjct: 354 GTLGYSERPLLEKWARDSKILDIFEGTQQIQQLIVARRL 392


>gi|115522640|ref|YP_779551.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516587|gb|ABJ04571.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 383

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 118/355 (33%), Gaps = 28/355 (7%)

Query: 107 LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT 166
           ++     G         F  +                A L   ++   +  +  +++   
Sbjct: 42  MKAMGEMGFIAPELPEEFGGLGMGSLAAGVIHEEIARADLSISYINLLASLNGQILSQHG 101

Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226
            P + K W  ++ +                 + + LTE RGG+D A +  + ++  D  Y
Sbjct: 102 RPEIAKPWLARLLAG-------------DALVAIALTEPRGGSDAANLRLRIERDGDD-Y 147

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
            ++G K  +S+       ++    G V  G   V  LL      G+   R  +  G R+ 
Sbjct: 148 IVNGEKTSISAADQADAAVVFGRTGSVESGAHGVTALLIRMDLPGITRSRF-DCHGQRAI 206

Query: 285 ATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
               L F N        LGD N     V            +  ++  RV+L E   +   
Sbjct: 207 GRGSLFFENVRVPGSHRLGDENKGFVQVMQGFDFSRALIGLQVLAVARVALEETWAHVAE 266

Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
           R   G  L     +   +AD+   + AA  L  +     D+    S EAA  +  AP   
Sbjct: 267 RQAFGQPLSAFQGVSHPLADLDTQVEAARLLCLQALWLKDKGAPHSREAAMCKWWAP--- 323

Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
               K+A  V+ + +   G  GY     + +  R+     +  G+   M   +  
Sbjct: 324 ----KLAYDVVHQCLLLHGHGGYDRG-VMEQRLRDVLGFQLGDGTAQIMKTIIAR 373


>gi|322710100|gb|EFZ01675.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23]
          Length = 530

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 99/479 (20%), Positives = 183/479 (38%), Gaps = 79/479 (16%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-----MTTPR 169
           +  + +D  +    R     ++  R +L     A      ++   +   L          
Sbjct: 1   MVATGYDTPYGAFCRP----LQFLRTHLWVGSCANVGCPSAMQDGAACLLRRHLSHLELS 56

Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI---- 225
                A K    +      +   K +   G  +TE+ GG+D++   +      +G     
Sbjct: 57  AALSAAEKKVFTDAYKRLTSRDPKYAWTSGQWMTERTGGSDVSLTETVATYQPEGANGFA 116

Query: 226 ----------YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED---------- 264
                     + ++G KWF S+  S+  ++LA+   G +  FL P    D          
Sbjct: 117 SKQGQIPLGPWSINGFKWFSSATDSEMTVLLARTAAGGLSTFLAPMRKHDPEATTLTGEP 176

Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320
                + NG+  QRLKNK G +S  T EL   N  G+++G        +  +  L  + S
Sbjct: 177 KDDGRALNGVRIQRLKNKFGTQSLPTAELVLDNMRGWMVGREGRGIHEISTILTLTRVHS 236

Query: 321 AIMSVSGMRVSLAEAIHYARRR--HVSGGI---LIDQPVMKRAIADIALDIAAATALSFR 375
           A+ +V G+   L  A  YA  R     G     L+D P+  R +A I+ +      ++F 
Sbjct: 237 AVAAVGGVGRGLGIARAYALVRDVGAGGRKRTRLVDSPLHMRTLAKISAEYRRLMLVTFY 296

Query: 376 LA-------NSFDEAKSRSEEA---------AYARIMAPITKYWCCKMAPAVIAEAMECI 419
            +       +S D   S + +A            RIM+ + K + CK + A++   ME +
Sbjct: 297 TSYVLGVSEHSLDARPSPALDALTPQGKLVEPLLRIMSQLAKAYVCKPSVALLFSCMEAL 356

Query: 420 GGSGYI----EER-SIARHYRESPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFST 471
           GG GY+    +E  +I+R YR++    I  G+ + +  D++  ++    G +    L   
Sbjct: 357 GGVGYLVNEEQEYLNISRIYRDTCVLPIWEGTTDVLCTDLIRAMKHARGGADSLAALDEV 416

Query: 472 LEQDLGSSGKKV----------ITILRDSISLCKEDK--GLARFLTEKIALASSAAALY 518
           + +  G  G+               L+  I   ++    G AR +  ++    ++  LY
Sbjct: 417 VRKAWGFEGRAGRPAGWEPVEKWAALKSKIEGTEQADLMGEAREVVWQLGDILASVLLY 475


>gi|169630568|ref|YP_001704217.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242535|emb|CAM63563.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 403

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 108/277 (38%), Gaps = 21/277 (7%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGR 252
             +   + +TE   G+D AA+++  +   D  Y ++G K F+++       ++ A ++  
Sbjct: 127 GKIWAAMAITEPGFGSDSAAVSTTAKLDGDE-YVINGEKIFVTAGSRATHIVVWATLDKT 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
            G   +   L      G+  +RL+ K+G +++ T  + F N      ++L D  ++T   
Sbjct: 186 KGRPAIKSFLVPREHPGVTIERLEEKLGIKASDTAVIRFDNARIPKDYILSDPEINTEKG 245

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA--------IHYARRRHVSGGILIDQPVMKRAIAD 361
               ++   D+    V+ M V ++ A        +  A            Q         
Sbjct: 246 FGG-VMSTFDNTRPIVAAMAVGVSRASLEELRKILEDAGIEISYDRPAHAQHAAAAEFLR 304

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  ++  L+ R A   D     S EA+ A+  A        ++   +  +A+E  G 
Sbjct: 305 MEADWESSYLLTLRSAWQADNNVPNSMEASMAKAKAG-------RVGSDITLKAVEMAGT 357

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +GY E   + +  R+S    I  G+     L V   L
Sbjct: 358 TGYSERTLLEKWGRDSKILDIFEGTQQIQQLVVARRL 394


>gi|295690472|ref|YP_003594165.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295432375|gb|ADG11547.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 387

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 124/365 (33%), Gaps = 36/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM--AQ 145
                R D+    P     +      G        S               +      A 
Sbjct: 26  DEYWRRTDETGNFPE--DFVAAIAEGGWLGVAMPESVGGAGLGLTEAAVMMQTVAQSGAG 83

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
                 +  ++     +    T    +   PKI S E               +   +TE 
Sbjct: 84  FSGASAIHLNIFGPMPLVKFGTDEQRERLLPKIISGEDK-------------MCFAVTEP 130

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC----FLVPR 260
             G D +++ ++ +++ DG Y L+G K + +    ++  +++A+   +  C      +  
Sbjct: 131 NSGLDTSSLETRAERV-DGGYRLNGRKIWTTGAQRANKILIIARTTPKDQCAKPTQGLSL 189

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIY 317
              D         +   K+G ++     L   + F     L+G+       +        
Sbjct: 190 FYTDREK---IEAKPIPKMGRKAVECNMLFIEDLFVPAEDLVGEEGKGFQYLLHGLNPER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           +  A  ++   R +LA+A  YA+ R V G  +     +   +A    ++ AA  L+F+ A
Sbjct: 247 VLFAAEAIGLGRAALAKAATYAKERVVFGRPIGQNQGVAHPLAKSWAELEAANLLAFKAA 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D  K    EA  A+ +     +  C+        ++   GG GY +E  + R++RE+
Sbjct: 307 ALYDAGKECGAEANAAKYLGAEAGFHACEA-------SVLAHGGMGYAKEYDVERYFREA 359

Query: 438 PANSI 442
               I
Sbjct: 360 MIARI 364


>gi|240168160|ref|ZP_04746819.1| acyl-CoA dehydrogenase FadE2 [Mycobacterium kansasii ATCC 12478]
          Length = 406

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 123/372 (33%), Gaps = 28/372 (7%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D     P    L  ++   GL              + A         L    EA +  +P
Sbjct: 37  DDHTVPPIIEELKIKAKERGLWNLFLPAESGLTNLEYAPLAELTGWSLEIAPEALNCAAP 96

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAA 213
              +  ++ +  T    + W   +   E                   +TE     +D   
Sbjct: 97  DTGNMEILHMFGTDEQRRQWLKPLLDGEIR-------------SAFSMTEPAVASSDARN 143

Query: 214 ITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFLV-PRLLEDGSPNG 269
           I +   +   G Y ++G KW+ S    P     I++ +             +L      G
Sbjct: 144 IETTISRDG-GDYVINGRKWWTSGASDPRCKILIVMGRTNPDAAAHQQQSMILVPMDTPG 202

Query: 270 LCYQRLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSV 325
           +   R     G +      E+ + N       LLG+        +       +   + ++
Sbjct: 203 VTIIRSTPVFGWQDQHGHCEVSYDNVRVPATNLLGEEGSGFAIAQARLGPGRIHHCMRAL 262

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
            G   +LA  +  AR R   G  L +Q V+++AIA    +I  A  L  + A + D+  +
Sbjct: 263 GGAERALALMVDRARNRVAFGRPLAEQGVVQQAIAKSRNEIDQARLLCEKAAWTIDQHGN 322

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           +      AR +  + K    ++A  VI  A++  G +G  ++  +AR Y    A  I  G
Sbjct: 323 KE-----ARHLVAMIKAVAPQVACDVIDRAIQVHGAAGVSDDTPLARLYSWHRAMRIFDG 377

Query: 446 SGNAMVLDVLNL 457
                +  +   
Sbjct: 378 PDEVHLRSIARA 389


>gi|254823202|ref|ZP_05228203.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC
           13950]
          Length = 650

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 79/430 (18%), Positives = 145/430 (33%), Gaps = 54/430 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
             ++     G         +  +   Q    RA  +        G L+S   S+     +
Sbjct: 85  EYVKGLADLGCFGMKIPTEYGGLGMSQVAYNRALMMVTSVHPSLGALLSAHQSIGVPEPL 144

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  TP   K + P+  +                     LTE   G+D A + S    I 
Sbjct: 145 KLAGTPEQKKKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPID 190

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 191 DGQAYELDGVKLWTTNGVVAELLVIMARVPKSEGRRGGISAFVVEADSPGITVERRNKFM 250

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLA 333
           G R                    N+     + +KI L  L++  +S+        + +L 
Sbjct: 251 GLRGIENGVTRLHRVRVP---RENLIGSEGDGLKIALTTLNAGRLSIPASATGSSKWALK 307

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  L +   + R ++ IA  + A  A+    A   DE ++        
Sbjct: 308 IAREWSGERVQWGKPLAEHEAVARKLSFIAATVYALDAVLELSAQMADEGRNDIR----- 362

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSIL 443
            I A + K W  +MA  +  E M+  GG GY   E           + +  R+   N I 
Sbjct: 363 -IEAALAKLWSSEMACVIADEVMQIRGGRGYETAESLAARGERAVPVEQALRDLRINRIF 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GS   M L +           E + + L    G   K    + + + +        A++
Sbjct: 422 EGSSEIMRLLIAR---------EAVDAHLAAA-GDLAKPDTGLRQKAAAAVGASGFYAKW 471

Query: 504 LTEKIALASS 513
           L + +     
Sbjct: 472 LPQLVFGEGQ 481


>gi|331695428|ref|YP_004331667.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326950117|gb|AEA23814.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 388

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 120/367 (32%), Gaps = 38/367 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI-----RAARLYL 142
                  D     P      +     G         +    R            AA    
Sbjct: 25  DEYWRACDAEHRFP--WDFYKAMAEGGWIGIAIPEEYGGGGRGITEASIVLEEVAASGAG 82

Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202
           M    A HL   SV   + V    +  + + + P++ S +               +  G+
Sbjct: 83  MNGASAIHL---SVFGMNPVVKYGSEEMRERYLPRVASGDLH-------------VAFGV 126

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLV 258
           TE   GTD  +IT++ +   D         W   +   +  ++L +             +
Sbjct: 127 TEPDSGTDTTSITTRARLDGDHYVVRGQKVWTSKAGDCEKVLLLVRTTPIEECAKRTDGM 186

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKIL 315
             LL D     +  + +  K+G  + A+ E  + +    +   +G+       + D    
Sbjct: 187 TLLLADLQVPEVDIRPIP-KLGRNAVASNETRYDDLRVPVTDRVGEEGKGFRYLLDGLNP 245

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  ++   RVS+  A+ YA  R V G  +     +   +A+  + + AA      
Sbjct: 246 ERILIASEALGIGRVSVRRAVEYANGREVFGRPIGKNQGIAFPLAEAHMKLRAAELAIRE 305

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            +  +D      E+A  A+ +A    ++    A       M+  GG GY +E  + R + 
Sbjct: 306 ASWRYDAGLPCGEQANTAKYLAAEAGHYAADRA-------MQTHGGFGYADEYDVGRWWS 358

Query: 436 ESPANSI 442
           ES    I
Sbjct: 359 ESRLMKI 365


>gi|300789720|ref|YP_003770011.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299799234|gb|ADJ49609.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 401

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 23/283 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
           + +   + +TE   G+D AA+++  +   D  Y L+G K F++S   +DA ++ A ++  
Sbjct: 127 SGMWAAMAITEPAFGSDSAAVSTTARLDGDH-YVLNGEKIFVTSGERADAVVVWATLDKS 185

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
            G   +   + +    G    R ++K+G R++ T  L F N        L    + T   
Sbjct: 186 KGRAAIKSFVVEKGTPGFEVVRTEHKLGIRASDTAVLRFENCRVPKENLLGTPEIDTKKG 245

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIAD 361
               ++   D+    V+ M + +A A     +R ++              Q         
Sbjct: 246 FAG-VMQTFDNTRPLVAAMAIGVARAALEETKRILTSAGVTIDYDRPANAQHAAAAEFLR 304

Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421
           +  D  +A  L+   A   D  +  S +A+ A+  A  +          +  + +E  G 
Sbjct: 305 LEADYESAYLLTLESAWMADNRQPNSLQASMAKAKAGRSV-------VEIALKCVELTGA 357

Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464
             Y EE  + +  R++    I  G+     L V   +   T+ 
Sbjct: 358 --YSEESLLEKWARDAKILDIFEGTQQIQQLIVARRILGKTSA 398


>gi|76801526|ref|YP_326534.1| acyl-CoA dehydrogenase 11 [Natronomonas pharaonis DSM 2160]
 gi|76557391|emb|CAI48968.1| acyl-CoA dehydrogenase 11 [Natronomonas pharaonis DSM 2160]
          Length = 405

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 129/364 (35%), Gaps = 34/364 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L   +   G++    D  +  +    R        A   L+    A  + +P   +  +
Sbjct: 45  ELREAARDYGVYAPQIDEEYGGMGYDFRDVLPTFEEAGRSLLG-AAAMRVDAPDEGNMHL 103

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           + L  +    +++               P+    +  G  +TE    GG+D   + +  +
Sbjct: 104 LELHGSELQKEEYLE-------------PLVAGDIVSGFSMTEPMQGGGSDPKMLKTTAE 150

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKN 277
           K  D  + ++GHKW+ +  + +D  ++ A+ +     +      +     +G+  +R   
Sbjct: 151 KDGDE-WVINGHKWWTTKGIQADILLVFARTDQEAHPYEGCSVFIVPADADGVEIERNIP 209

Query: 278 KIG--NRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
            +G         E++++N       LLG   +    V++      L   +        +L
Sbjct: 210 HLGSETHGIGHAEIKYNNVRVPEEHLLGQEGMGFAHVQERLGPARLTHCMRYSGMAERAL 269

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             A  Y   R   G  L ++ V +  +A+    +AAA AL  + A+S         E + 
Sbjct: 270 DIATAYMSEREAFGSKLAEKQVPRHEVAEHRTRLAAARALIRQAADSISAGNEARLEVSM 329

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
           A       K +   +    +  +++  GG+G  ++  IA  Y       ++ G+      
Sbjct: 330 A-------KVFTANVTQEAVDTSLQFCGGNGIAKDLPIADFYESVRQFRLVDGADEVHKR 382

Query: 453 DVLN 456
            +  
Sbjct: 383 VISR 386


>gi|118472697|ref|YP_886442.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118173984|gb|ABK74880.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2
           155]
          Length = 442

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 127/347 (36%), Gaps = 32/347 (9%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ ++   G+        FE +   ++    A     +A  + G  +          AL
Sbjct: 118 DLIAKAAELGITAVNVPEDFEGIAEHRSTVTNALVAEALAYGDMGLALPILAPGGVASAL 177

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      +  K ++ +  P +            + + E     D   + +   +  
Sbjct: 178 THWGSADQQATYL-KEYAGDNVPQS-----------SVVIAEPHALFDPTELKTTAVRTP 225

Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G Y LSG K  + +   ++ FI+ AQ  G+   F+V       S  GL   +    +G 
Sbjct: 226 SG-YRLSGVKSLVPAAADAELFIVAAQFNGKPALFIVEA-----SSKGLSV-KADRSMGL 278

Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIMSVSGMRVSLAEAIHY 338
           R+ A  ++E  N    L   L       +   +   L  L  A ++V      L   + Y
Sbjct: 279 RAAALGQIELDNVTVPLSARLGEDGATDQDYSEAIALARLGWAALAVGTSHAVLDYVVPY 338

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
            + RH  G  +  +  +    A+IA+++     +++R A   ++    + EAA AR +  
Sbjct: 339 VKERHAFGEPIAHRQSVAFMCANIAIELDGLRLITWRGAARAEQGLPFAREAALARKL-- 396

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                       +  + ++ +GG GY +E  + R YR+  A  I  G
Sbjct: 397 -----GADKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRAIGIAEG 438


>gi|88857933|ref|ZP_01132575.1| acyl-coa dehydrogenase RedW [Pseudoalteromonas tunicata D2]
 gi|88819550|gb|EAR29363.1| acyl-coa dehydrogenase RedW [Pseudoalteromonas tunicata D2]
          Length = 388

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 112/316 (35%), Gaps = 25/316 (7%)

Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
             L +        +    +      W PK+ S  +                  +TE++ G
Sbjct: 87  FALSAHLCACIHPIRAFGSIEQKHQWLPKLSSEAW-------------LGAHAITEQQAG 133

Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           +DI  +T++  K   G        +  ++P  D  ++  +       F     + D    
Sbjct: 134 SDIYGMTTRADKYDHGFILTGNKHYITNAPFCDFIVVHVRTADAGNYFDFSTFILDRQTP 193

Query: 269 GLCYQRLKN-KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
            +   +  + K G R+ A  ++ FS        L+G L       +       +    + 
Sbjct: 194 CVSVTQTPHSKSGLRTTAMGDITFSTCQLSDDALIGRLGAGAPIFQVSMEWERVCLFALY 253

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +  M+  L + + +  +R   G  L +   ++  ++D+  +  +A  L ++ A   D   
Sbjct: 254 LGQMKRQLKKTVQFLSQRQQFGSKLAEFQAVQHQVSDMYSNYESARLLLYKAAWGLDRGD 313

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444
           +    +A A++          + A +    A++  G  G +    I R  R++  ++I  
Sbjct: 314 TSGVSSALAKLA-------VSQAAISNAQMAVQLHGAQGVLSG-DIERMLRDAMPSAIFS 365

Query: 445 GSGNAMVLDVLNLLEK 460
           G+ N +  ++   L K
Sbjct: 366 GTTNVLKNNLSTSLFK 381


>gi|114762743|ref|ZP_01442177.1| putative acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601]
 gi|114544653|gb|EAU47659.1| putative acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 387

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 112/365 (30%), Gaps = 35/365 (9%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +      G   ++    +                   A   
Sbjct: 25  DEYHRKIDEDRAYPE--AFVDALTKAGWMAALIPEEYGGSGLGLTEAAVIMEEINRAGGN 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + + + +    +    +   PK+ S E                 +G+TE   
Sbjct: 83  -SGACHGQMYNMNTLVRHGSEEQRQRILPKLASGELR------------LQSMGVTEPTT 129

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLE 263
           GTD   + +   K  D         W      SD  I+LA+       +     +   L 
Sbjct: 130 GTDTTQLKTTAVKKGDKYVINGQKVWISRVQHSDLMILLARTTPLSEVKKKSEGLSIFLV 189

Query: 264 D---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317
           D      +G+  + + N + N    T EL F N       L+G+       +        
Sbjct: 190 DIKEAMQSGMTVRPIPN-MVNH--ETNELFFDNLEIPEENLIGEEGKGFKYILTGLNAER 246

Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
              A   +          ++Y   R+V G  +     ++  IA+  +++ AA  +  + +
Sbjct: 247 TLIAAECIGDGYWFTDRVVNYVSERNVFGRAIGQNQGVQFPIAEAYIEVEAANLMCRKAS 306

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
             +D  +    EA  A+ +A    +             ++  GG G+  E  + R +RE+
Sbjct: 307 RLYDAGQPCGAEANMAKYLAAKASW-------EAANSCLQFHGGFGFACEYDVERKFRET 359

Query: 438 PANSI 442
               +
Sbjct: 360 RLYQV 364


>gi|154245293|ref|YP_001416251.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154159378|gb|ABS66594.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 387

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 118/364 (32%), Gaps = 41/364 (11%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            + D+   +P     +      G   ++    +                   A       
Sbjct: 29  RKVDEARAYPE--DFVDALTKAGWMAALIPEEYGGSGLGLTEASVIMEEINRAGGN-SGA 85

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
               + + + +    +    K + PKI + E                 +G+TE   GTD 
Sbjct: 86  CHGQMYNMNTLVRHGSEEQRKRYLPKIAAGELR------------LQSMGVTEPTTGTDT 133

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   K  D         W      SD  I+LA+       +     +   + D   
Sbjct: 134 TRIKTTAVKKGDRYVINGQKVWISRVQHSDLMILLARTTPLDQVKKKSEGLSIFIVDIKE 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIM 323
               G+  + + N + N    T EL F N     + + N+     +  K IL  L++   
Sbjct: 194 AMSKGMTVRPILN-MVNH--ETNELFFDN---LEIPEENLIGEEGQGFKYILTGLNAERT 247

Query: 324 SVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378
            ++   +      + +   YAR R V G  +     ++  IA+  +++ AA  + F    
Sbjct: 248 LIAAECIGDGYWFIDKVTAYARERVVFGRPIGQNQGVQFPIAESFIEVEAANLMRFEACR 307

Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438
            +D  +    +A  A+ +A    +             ++  GG G+  E  I R +RE+ 
Sbjct: 308 LYDAHQPCGTQANMAKYLAAKASW-------EAANACLQFHGGFGFACEYDIERKFRETR 360

Query: 439 ANSI 442
              +
Sbjct: 361 LYQV 364


>gi|194385004|dbj|BAG60914.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 27/260 (10%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           A+ + A  L  +       +   S      +    +    + + P++             
Sbjct: 89  AYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQL------------- 135

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHK-WFLSSPMSDAFIMLAQV 249
            K  +    GLTE   G+D +++ ++    S +  Y L+G K W  +SPM+D F++ A+ 
Sbjct: 136 AKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 195

Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309
           E       +   L +    GL   R++ K   R++AT  +           + NV  G  
Sbjct: 196 EDG----CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVP---EENVLPGAS 248

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364
                   L++A   ++   +  +E     A  YA  R   G  L    ++++ +AD+  
Sbjct: 249 SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLT 308

Query: 365 DIAAATALSFRLANSFDEAK 384
           +I        +L    D+ K
Sbjct: 309 EITLGLHACLQLGRLKDQDK 328


>gi|319795974|ref|YP_004157614.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
 gi|315598437|gb|ADU39503.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax
           paradoxus EPS]
          Length = 389

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 121/361 (33%), Gaps = 33/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK--QAHKIRAARLYLMAQLEAG 149
              D+    P  HA  R     G        +         +A  +  A     A +   
Sbjct: 29  RDHDERAVFP--HAFHRAVAESGWLGIAMPEAQGGAGLGITEAALMMRAISASGAGMSGA 86

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
             +  ++   + V +  T    + + P             P+   +      +TE   G 
Sbjct: 87  SSVHMNIFGLNPVVVFGTEAQRQRFLP-------------PLIAGTEKACFAVTEPDAGL 133

Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED 264
           D  ++ +Q  +  +G Y L G K W  ++ ++D  ++L +       +     +      
Sbjct: 134 DTTSLKTQAVRQPNGSYLLHGRKIWISTAQVADRMLILTRTTPIDQVKKPTQGLTLFYTA 193

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSA 321
              + +  + + +K+G  +  +  L            +G+       +        +  A
Sbjct: 194 LDRSKVEVREI-HKLGRAAVDSNMLFIDGLEVPEEDRIGEEGRGFEYILHGLNPERILIA 252

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             ++     +L  A  YA+ R V G  +     +   +A    ++ AA  +  + A  +D
Sbjct: 253 AEAIGIGSAALRIASQYAQERVVFGRPIGQNQGVAHPLARAWANLEAADLMMLKAATLYD 312

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             +    EA  A+ +A    +  C+ A       +  +GG GY +E  + R  RES    
Sbjct: 313 ANEPCGIEANAAKYLAAEAAHDACQNA-------VLTLGGMGYAKEYHVERLLRESYIPR 365

Query: 442 I 442
           I
Sbjct: 366 I 366


>gi|225012368|ref|ZP_03702804.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
 gi|225003345|gb|EEG41319.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium
           MS024-2A]
          Length = 393

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 136/394 (34%), Gaps = 38/394 (9%)

Query: 83  QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142
           +L    P     +  E  P    L  ++  +GL       ++  +    A     + +  
Sbjct: 17  ELLTLEPWILNVEWEEKLPKLKELRNKAKSEGLWLPQIPTAYGGLGLTNAQHGEVSEILG 76

Query: 143 MAQLEAGHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
            +      L    P   +  ++    T    + +               P+ K  +    
Sbjct: 77  ASPYGHYCLNCQAPDAGNMEILIEFGTDHQKETYL-------------YPLLKGEIRSCF 123

Query: 201 GLTEK-RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVE--GRVGCF 256
            +TE    G++   + +   K  +G Y ++GHKWF S      F I++   +  G+    
Sbjct: 124 AMTEPDHAGSNPVKMGTIATKE-NGNYVINGHKWFTSGFDGATFAIVMLVTDPEGKNPHK 182

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSN---ATVELEFSNTFGFLLGDLNVSTGPVEDMK 313
              +++   S  G+ + R  + +G+  +   +  E++F      L    NV  G  E   
Sbjct: 183 KASQVIVPTSTEGVEFVRNVSIMGHSGSGWESHAEIKFHEVKVPLS---NVLGGDGEGFT 239

Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRH-VSGGILIDQPVMKRAIADIALDI 366
           I         +   +  +     +       A  R    G +L ++  ++  I++   +I
Sbjct: 240 IAQKRLGPGRIHHCMRWIGMCERAFDLMCQRAVSREIAEGVMLGEKQTIQNWISECRAEI 299

Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
            AA  L    A+  D   +        R    I K++C ++   V+  A++  G  G  +
Sbjct: 300 NAARLLVQDAAHKIDVQGAYET-----RSEISIIKFYCAQVLQKVVDCAIQVHGAKGVTD 354

Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  ++ +YR   A  I  G+       +   + K
Sbjct: 355 DTILSLYYRHERAARIYDGADEVHKSRLARSILK 388


>gi|114797237|ref|YP_759009.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114737411|gb|ABI75536.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 390

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 129/376 (34%), Gaps = 40/376 (10%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC-SIWDRSFEPVVRKQAHKIRAARL 140
           P+L  +GP                L  ++   G+    I         R  AH ++   L
Sbjct: 31  PRLEEHGPS---------PELVKELREKARAAGVMTPHILPDHTHLTQRGTAHVLKKTGL 81

Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
             +  + A +  +P   +  ++  + T      +   + S E          +++  +  
Sbjct: 82  SPLGPV-ACNTGAPDEGNMFLLGKVATDAQRARFLEPLVSGE---------ARSAFFMTE 131

Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259
              E   G+D + + +   K  D  + ++G K F++    +   I++A+ E     FLV 
Sbjct: 132 PAGEDGAGSDPSMMKTTAVKDGDH-WVINGRKTFITGADGASVGIVMAKAEEGACMFLV- 189

Query: 260 RLLEDGSPNGLCYQRLKNKI-----GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
               D     +  +RL + I     G  +   +E         +LG         +    
Sbjct: 190 ----DLPSPAIRIERLLDTIDSSMPGGHAQVMIE-NLRVPQADMLGKPGEGFRYAQIRLA 244

Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374
              L   +        +   A  YA  R   G +LID   +   +A+  +++  A  +  
Sbjct: 245 PARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAELMID 304

Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434
             A++ D  ++ + E++ A       K    +    V    ++ +GG G   +  + + +
Sbjct: 305 WCADALDAGENGNVESSMA-------KVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLF 357

Query: 435 RESPANSILLGSGNAM 450
           RE  A  I  G     
Sbjct: 358 REVRAFRIYDGPTEVH 373


>gi|108797079|ref|YP_637276.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119866164|ref|YP_936116.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126432701|ref|YP_001068392.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108767498|gb|ABG06220.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119692253|gb|ABL89326.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
 gi|126232501|gb|ABN95901.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
          Length = 433

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 120/368 (32%), Gaps = 28/368 (7%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    L + +   GL              + A     +   +    E  +  +P   +
Sbjct: 70  VPPVVEDLKKLAKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVINCAAPDTGN 129

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQ 217
              + L       K W   + + E                   +TE     +D   I + 
Sbjct: 130 METLHLFANDEQRKQWLDPLLNGEIR-------------SAFAMTEPAVASSDARNIETT 176

Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQ 273
             +     Y ++G KW+++    P     I++ +             +L      G+  Q
Sbjct: 177 MLRDGSD-YVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQ 235

Query: 274 RLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
           R     G +      E+ F N       LL +        +       +   + ++    
Sbjct: 236 RSLPVFGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAE 295

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +LA  I   ++R   G  L +Q V++ AIA    +I  A  L  + A + D+  +++  
Sbjct: 296 RALALMIDRVQKRVAFGKPLAEQGVVREAIAKSRNEIDMARLLCHKAAWTIDQEGNKA-- 353

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
              A ++    K    ++A  VI  A++  GG+G  ++  +AR Y    A  +  G    
Sbjct: 354 ---AHVLVSQIKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRAMRLFDGPDEV 410

Query: 450 MVLDVLNL 457
            +  +   
Sbjct: 411 HMRTIARA 418


>gi|319760898|ref|YP_004124835.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|330822802|ref|YP_004386105.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
 gi|317115459|gb|ADU97947.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus
           denitrificans BC]
 gi|329308174|gb|AEB82589.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601]
          Length = 388

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 121/366 (33%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +PA    +      G   ++  + +         +       +     
Sbjct: 26  DEYFRKVDEQRAYPA--EFVDALTKAGWMAALIPQEYGGSGLGLT-EASVIMEEINRCGG 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + +   +    +    + + PKI S E+                +G+TE   
Sbjct: 83  NSGACHGQMYNMGTLLRHGSQAQKEKYLPKIASGEWR------------LQSMGVTEPTT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLL 262
           GTD   I +   K  DG Y ++G K ++S    SD  I+LA+             +   +
Sbjct: 131 GTDTTKIKTSAVKK-DGRYVVNGQKVWISRVQHSDWMILLARTTPLAEVTKKSEGMSIFM 189

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            D       GL  + + N + N    T EL F +       L+G+       + D     
Sbjct: 190 VDLAEAQKKGLTVRPIPN-MVNH--ETNELFFEDLEIPEENLIGEEGKGFKYILDGLNAE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      L     Y + R V G  +     ++  IAD  +++ AA  + ++ 
Sbjct: 247 RTLIAAECIGDGYWFLDRVTSYVKDRQVFGRPIGQNQGVQFPIADAFIEVEAANLMRWKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD  +    +A  A+ +A    +             ++  GG G+  E  + R +RE
Sbjct: 307 CELFDRHEPMGAQANMAKYLAAKASW-------EAANACLQFHGGFGFACEYDVERKFRE 359

Query: 437 SPANSI 442
           +    +
Sbjct: 360 TRLYQV 365


>gi|227832411|ref|YP_002834118.1| putative acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183729|ref|ZP_06043150.1| putative acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453427|gb|ACP32180.1| putative acyl-CoA dehydrogenase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 391

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 114/307 (37%), Gaps = 34/307 (11%)

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
           +   +A++ +P    ++ P++ S              S+    GLTE   G+D  A+ + 
Sbjct: 106 AMRSIAMLGSPEQQAEYLPQMASC-------------SLLGAFGLTEPAHGSDSIALETT 152

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLK 276
             +  D        KW  +       I+ A++ +G VG F+VP         G     ++
Sbjct: 153 AVRDGDEWVLNGEKKWIGNGASGGITIIYARMEDGNVGGFIVP-----QEAPGYSASVIE 207

Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336
            K+  R+     +  ++        L       +  ++L    +  + VS M +  A A 
Sbjct: 208 GKLSLRAIHQAHITLTDCRIPASNQLPGCRSFKDVSRVLT---ATRIGVSWMALGSAVAC 264

Query: 337 H-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +     Y   R   G  L    ++++ +A++ LD++        ++        R     
Sbjct: 265 YEIARSYVLERVQFGRELAKAQIIQQRLANMVLDLSQMMLTCREVS-------LRETAGT 317

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A   A   K    + A  + A+A + +GG G + E  IARH+ +  A     G+     
Sbjct: 318 LAPEQASAAKLHNTRAARRIAADARDMLGGVGILLENDIARHFADIEAMHTYEGTDTVQS 377

Query: 452 LDVLNLL 458
           L +   +
Sbjct: 378 LIMGKKI 384


>gi|331697889|ref|YP_004334128.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
 gi|326952578|gb|AEA26275.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190]
          Length = 383

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 32/299 (10%)

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              + +   V    +P   + + P I S +                  G+TE   GTD  
Sbjct: 85  HAQLYTMGAVLRHGSPEQRERYLPGIASGDIR------------LQAFGVTEPTAGTDTT 132

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLED-GS 266
            I +  ++  D  Y ++G K + S    SD  ++LA+             +   L D   
Sbjct: 133 KIRTFARRDGD-SYVVNGQKVWTSRVQHSDLMLLLARTTPLDQVEKKSQGMSMFLIDLRE 191

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIM 323
             G+    +   + N    T E+ F +       L+G+       + D      +  A  
Sbjct: 192 VEGITVNPI-RTMVNH--ETNEVFFDDVRIPASALVGEEGKGFRYILDGMNAERVLVAAE 248

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
            +   R  +  A  YA  R V    +     ++  IA   + + +A  + +R A+ FD  
Sbjct: 249 CIGDGRWFVERASRYACERVVFDRPIGQNQGIQFPIARAHVHVESADLMRWRAADLFDAD 308

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           +    EA  A+++A    +             ++  GG G   E  + R +RE+    I
Sbjct: 309 QPCGAEANMAKLLAADASW-------EAANACLQTHGGFGMAAEYDVERKFRETRLYQI 360


>gi|118616152|ref|YP_904484.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium ulcerans Agy99]
 gi|118568262|gb|ABL03013.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium ulcerans Agy99]
          Length = 650

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/430 (17%), Positives = 137/430 (31%), Gaps = 54/430 (12%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMV 162
             ++     G         +  +   Q    RA  L   +   L A      S+     +
Sbjct: 85  EYVKGLAELGCFGMKIPSEYGGLSMSQVAYNRALMLASTVHTSLGALLSAHQSIGVPEPL 144

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  +P   K + P+  +                     LTE   G+D A + S    I 
Sbjct: 145 KLAGSPEQKKKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPID 190

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
           DG  Y L G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 191 DGQAYELEGIKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFM 250

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE---- 334
           G R                    N+     + ++I L  L++  +++  M    A+    
Sbjct: 251 GLRGIENGVTRLHRVRVP---KENLIGREGDGLRIALTTLNAGRLAIPAMVTGAAKWSLK 307

Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  L     +   I+ IA    A  A+        DE ++        
Sbjct: 308 IAREWSGERVQWGKPLGKDEAVAGKISFIAATTYALEAVVEISGQMADEGRNDIR----- 362

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSIL 443
            I A + K W  +MA  V  E ++  GG GY   E           + +  R+   N I 
Sbjct: 363 -IEAALAKLWSSEMACQVADELLQIRGGRGYETAESLAARGERAAPVEQSLRDVRINRIF 421

Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503
            GS   M L +            +         G   K    + + + +        A++
Sbjct: 422 EGSSEIMRLLIAR----------EAVDAHLTAAGDLAKPNTDLRKKAAAAVGASGFYAKW 471

Query: 504 LTEKIALASS 513
           L + +     
Sbjct: 472 LPQLVFGEGQ 481


>gi|294505947|ref|YP_003570005.1| glutaryl-CoA dehydrogenase [Salinibacter ruber M8]
 gi|294342275|emb|CBH23053.1| Glutaryl-CoA dehydrogenase [Salinibacter ruber M8]
          Length = 447

 Score =  165 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 31/317 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  ++ S   VAL  +    + +               PM    +     LTE   
Sbjct: 149 CTFWGVHTLLSMGSVALFGSEAQKERFLE-------------PMAAFDMIGSWALTEPDH 195

Query: 208 GTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D++  + +  ++  D        KW  ++  +D  ++ A+ E           L +  
Sbjct: 196 GSDVSQGLATTARREGDTWVLDGAKKWAGNATFADVTVVWARDEADGCIKG---FLVEQE 252

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G   +++  KI  R      +E        L + N   G      +   L +   SV+
Sbjct: 253 RPGYHVEQIGGKIAKRGVENGLIELDGV---ELPEANRLPGVSHFGDVSAQLATCRASVA 309

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                LA     +A+ Y   R   G       +++  +  +   + A      +L     
Sbjct: 310 WEAAGLATGAYEKALAYCNERTQFGKPTSSFQMVQDKLVTMLGKVTALQTFVMQLGRL-- 367

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +   A     + + K W C     V++ A   +GG+G + +  +AR + ++    
Sbjct: 368 ----EAGAGAIGNERSSLAKVWACDTMREVVSIARGIMGGNGILLDHDVARLFADAEGVY 423

Query: 442 ILLGSGNAMVLDVLNLL 458
              GS     L V   +
Sbjct: 424 SYEGSREMNALIVGRAI 440


>gi|239607997|gb|EEQ84984.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
          Length = 428

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 103/362 (28%), Gaps = 49/362 (13%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +H +    + L   L+  H +  +     M+             P               
Sbjct: 49  SHPVYGGGVSLANDLQNEHSVIGNFPIVLMLHHFGNEEQRSTLIP-------------AH 95

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-------------DGIYCLSGHKWFLSSP 238
            K       GLTE + G+D   + +  + +              DG       KW   + 
Sbjct: 96  LKGQFRATFGLTEPKHGSDATFMETAARPVQREYPAGSGAANAVDGFVINGAKKWQTGAH 155

Query: 239 MSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                I+ A+  G  G    +   L      G+     +  + N       +   + F  
Sbjct: 156 NCTHMIIFARTSGAPGSARGITAFLVPRETPGVNILSYEWTL-NMPTDHATVALEDVFVP 214

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQ 352
              +LG+L+      +       +  A  S    R  L +AI YA  R +   G  L D 
Sbjct: 215 RSAVLGELDRGLAIAQTFVHENRIRQAASSCGAARFCLDKAIEYANEREIWGKGKTLSDN 274

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE----------------AKSRSEEAAYARIM 396
             ++  + ++   +     L  R     D+                 K   E        
Sbjct: 275 QAIQFQVVELMTQVEMLRLLILRTGWEMDQVTAECGGHIDSPVPGSKKPWVEIEKRLTHK 334

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +  +W  ++       A++  GG+GY   +     YR      I  GS    +  +  
Sbjct: 335 VAMCNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFRRYRITEGSEEIQMRKIGA 394

Query: 457 LL 458
            L
Sbjct: 395 YL 396


>gi|302388246|ref|YP_003824068.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
 gi|302198874|gb|ADL06445.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum
           WM1]
          Length = 378

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 125/375 (33%), Gaps = 35/375 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +  D+   HP  H         G                       A   L+     G  
Sbjct: 30  QECDRNHEHP--HKFWDILKELGCFSMFLPEEAGGDGEG-------AITMLLVMEALGRC 80

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            +P               V  D   +  ++E          +   A   G +E   GTD+
Sbjct: 81  GTPVYLFW--------DHVKADALLENGTKEQIEKFMPLFFEGHPAYAQGFSEPTAGTDL 132

Query: 212 AAIT--SQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268
           ++ T  +   +  +G   ++GHK F+S    SD  + LA+         +       +  
Sbjct: 133 SSGTILTTYTRR-NGKVYINGHKHFISGAQGSDYCLTLAKNSENP--EQLTLWFVPTNGP 189

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSV 325
           G   + ++  +G       ++ F +         +    G +   K      L  A  + 
Sbjct: 190 GCKKEPMET-MGLHMENVNDIWFDDVEIEEKDMFSTEGNGLLATSKGFDYERLIDAFNAY 248

Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385
           +    +  +A  YA +R   G  +    +++  I ++A+ I A   +  R A + D    
Sbjct: 249 AQALCAYEDACRYANQRIAFGKEIGRLQLIQNHIMEMAMRIEAMRDMLLRYAWNKDNGLL 308

Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
           R EE       A I K +C + A  V+  AM+ + G G+     ++R YR+     I  G
Sbjct: 309 RREE-------ASIAKQFCSESANIVVDHAMQVMAGIGFC-GSRVSRIYRDLRITRISGG 360

Query: 446 SGNAMVLDVLNLLEK 460
           +G    +     + K
Sbjct: 361 TGEIQTVIASKQILK 375


>gi|190410071|ref|YP_001965595.1| probable acyl-CoA dehydrogenase-like protein [Sinorhizobium
           meliloti]
 gi|125631101|gb|ABN47102.1| probable acyl-CoA dehydrogenase-like protein [Sinorhizobium
           meliloti SM11]
          Length = 388

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 127/409 (31%), Gaps = 45/409 (11%)

Query: 55  HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114
           H++L    E      + EL  + + +  ++                     L       G
Sbjct: 18  HRQLAARIESWADEISSELGEIEDRSPAEIGRL------------------LTALFGRTG 59

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
            + ++      P  R           +           S    +A+ +    +       
Sbjct: 60  WYAAVGGADTPPDFRS---ICLIREGFGFVHDLFDFAFSIQALAAASLIKYGSAEQRAAL 116

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
            P I +                   L ++E   G+D+A ++ + +   +         W 
Sbjct: 117 LPDILAG-------------RSIGCLAMSESEVGSDLANVSLRAEHRGESYALSGTKTWI 163

Query: 235 LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294
            ++ ++D  I+LA+     G   +          G+        +  RS  +  L F   
Sbjct: 164 SNADIADFTIVLARTAEGGGPLGLSLFYVSTQSPGMRVSETIQAMAPRSFGS--LSFDEC 221

Query: 295 FGFLLGDLNV-STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351
                  +     G     +IL    +     +    R +   A+ +AR R +S G + D
Sbjct: 222 IVPADQMIGKPGHGFKIAGEILEQYRVTVGAAATGFARRARNAALSWARSRRLSTGTVWD 281

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411
             + K   AD  + +  +  L  + A   D+              + I K +  + A  +
Sbjct: 282 MQMTKSKFADSEVALTGSALLIAQAAWEIDQQIRG------YGKHSSIAKLFATEQAQRI 335

Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           I +A++  G +G +++    R YR+  +  I  G+     L +   L+ 
Sbjct: 336 IDDAVQIFGAAGIVKDTVPERLYRQIRSLRIYEGTSEIQRLIIAGCLQN 384


>gi|163792990|ref|ZP_02186966.1| acyl-CoA dehydrogenase, putative [alpha proteobacterium BAL199]
 gi|159181636|gb|EDP66148.1| acyl-CoA dehydrogenase, putative [alpha proteobacterium BAL199]
          Length = 400

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 130/374 (34%), Gaps = 38/374 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS--PSVTSASMV 162
            L  +    GL      +    +   Q     A      +           P   +  ++
Sbjct: 47  ELRAKVKAAGLWAPQMPKELGGLGFDQVGMAPAYEEMNRSIFGPVCFNCAAPDDGNMYIL 106

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQK 220
             + TP   + W               P+   SV     +TE     G+D + + ++ + 
Sbjct: 107 NRIGTPDQKQRWL-------------QPIVDGSVRSAFVMTEPSPGSGSDPSMMLTRAEP 153

Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + +  + ++G KWF++    +  FI++A+         +   +      G    R    +
Sbjct: 154 VGNARWRVNGLKWFITGAEEATHFILMAKTSDD-SRKGLTAFMFHKDQPGWRIVRRIPIM 212

Query: 280 GN--RSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMS-----VSGMRVS 331
           G         E+EF N     + D +      + +K   I L +A ++     +   + S
Sbjct: 213 GPEEHGGH-CEIEFEN---LEIDDRDRLMEVGDGLKLTQIRLGTARLTHCMRWLGLAKRS 268

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  AI YA RR   G  L D+  ++  + D+A  I     L+ + A          +E +
Sbjct: 269 MEIAIEYAERREGFGVRLSDRETIQTMLGDLAYKIEIGRLLTMKAAWKLAAGDFARKEVS 328

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
            A+I    T +         +  A++  G  GY ++  +   YR +    ++ G+     
Sbjct: 329 MAKIHVADTLH-------EAVDTAIQINGARGYSKDTPLEWIYRYARQARLVDGASEVHK 381

Query: 452 LDVLNLLEKGTNLF 465
           + +    ++  N F
Sbjct: 382 MVLARFYQQERNDF 395


>gi|172039877|ref|YP_001799591.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
 gi|171851181|emb|CAQ04157.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109]
          Length = 380

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 142/372 (38%), Gaps = 47/372 (12%)

Query: 89  PGGERWDKVEFHP--AWHALLRRSIHDGLHCSIWDRSFEPVVRKQ-AHKIRAARLYLMAQ 145
             G+  D+         + L R     GL  +     +    +   A  I A  L   A+
Sbjct: 19  RQGDALDQSSTCDELGQYDLWRELSDHGLIGAGLPCKYGGGGQGLFALSIVAEELARQAR 78

Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
           L    +MSP +   S++    +    +++ PKI                 +     +TE 
Sbjct: 79  LPVLLVMSPGIV-GSILLHGGSAEQKEEFLPKI-------------AAGDLKCAFAITEP 124

Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-----EGRVGCFLVP 259
             G++   I++    + DG Y L+G K F+S    +   +++A++     + ++GC LVP
Sbjct: 125 DAGSNTHRISTSLTPLGDGKYSLTGTKCFISGADEAQMILVVAKIKPDGEDAKLGCCLVP 184

Query: 260 RLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
                    GL   +++  K  + S     L F         ++G ++     +      
Sbjct: 185 -----CDTEGLTMSKIETEKFSDDSQ--WLLSFDRVEVDQSSVIGGISSGLKALFHGLNP 237

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A         +L  A+ YA  R V G  +     +   +A++ +DI  A  ++FR
Sbjct: 238 ERILMAAFCNGIALRALDLAVAYAESREVWGAPISTHQAISHPLAEVKIDIELARNMTFR 297

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI----- 430
            A+ FD        A Y++  A        + A   +  A++  GG+G++++  +     
Sbjct: 298 AASDFDSGGDCGASANYSKFAAA-------RAAVKSVDRAIQTHGGNGFVKDYRVSELFW 350

Query: 431 -ARHYRESPANS 441
            AR +R +P + 
Sbjct: 351 PARLFRTAPVSE 362


>gi|183219531|ref|YP_001837527.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909673|ref|YP_001961228.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774349|gb|ABZ92650.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777953|gb|ABZ96251.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 375

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 125/363 (34%), Gaps = 35/363 (9%)

Query: 102 AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
           +W  L       G    I    +  + +     +    +      E  +     + +   
Sbjct: 39  SWDVLRALG-DKGWTGVIVPEEYGGMGKG---AMEYTIIMEETAKELIYGPQNLIQAQQG 94

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           +  + T    + W P++              K  +     ++E   G+    I +   K 
Sbjct: 95  LLAVGTEEQKRKWLPEL-------------AKGKMMAAQAISEPDAGSSFQNIQTTAVKD 141

Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280
            +  + L+G K  ++    +   ++LA+ +       +   L D    G+ Y++ ++ IG
Sbjct: 142 ENE-WVLNGLKVHINLGKEAQLMMVLAKTD-----KGLTEFLVDRDSKGIRYEK-QDPIG 194

Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSLAEAIH 337
            RS    ++ F +    L   L      +E       L  L  A   +   R  L  A+ 
Sbjct: 195 LRSAPMYDVHFEDCRIPLDSVLGREGRGIETFMSIFKLSRLGVASQLIGIARGCLDHAVS 254

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           + + R V    + D   ++  IA +  ++ AA     + A   D+  + + E + A+ +A
Sbjct: 255 FTKSRKVGENRVSDFQGIQWIIAKLTSELEAAKLARNQAAWLHDQKVNHNLETSIAKYLA 314

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
            +        A  V+ +A    G       +   R+ RE  +     GS   M+ +V   
Sbjct: 315 GVV-------ADEVVNKAFTLTGSHACYRNKPYDRYVREVKSLLAGGGSSEVMLNNVARE 367

Query: 458 LEK 460
           + +
Sbjct: 368 ILR 370


>gi|154244141|ref|YP_001415099.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158226|gb|ABS65442.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus
           Py2]
          Length = 404

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 79/443 (17%), Positives = 144/443 (32%), Gaps = 64/443 (14%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYN--TPQLHAYGPGGERW 94
           ++    L  L     + V +E+  L        A   A  A+ N     L          
Sbjct: 3   FTISPALEDLRRRIGAFVDREIIPL-------EADPAAYDAHENIAPAPLAR-------- 47

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
                      L  ++  +GL           +   +            +        S 
Sbjct: 48  -----------LREKARAEGLWNLQLKPESGGLGVGRVGMAVCYTEMNRSIFGPVVFNSA 96

Query: 155 SVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR--GGTD 210
           +    +M+ L    TP     W              AP+   +V     +TE    GG+D
Sbjct: 97  APDDGNMMVLEAVGTPEQKAKWL-------------APIASGAVRSAFVMTEPHPGGGSD 143

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270
              + ++ +K  +G Y + G KWF++     A ++L           +          G 
Sbjct: 144 PGMMLTRAEKQPNGSYRIYGRKWFITGAEEAAHLILIARTSDDPRTGLTAFAFHRDAPGW 203

Query: 271 CYQRLKNKIGN--RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS--- 324
              R    +G         ELEF    G  +   +V  G  + +++  I L  A ++   
Sbjct: 204 RIVRRIPIMGPEEHGGH-CELEFD---GLEIPPEDVLLGEGKGLRVTQIRLGPARLTHCM 259

Query: 325 --VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
             +      +  A  YA  R+  G  L D+  ++  +  IA+DI  +  L+ + A   D 
Sbjct: 260 RWLGLAMRCVEIARAYADVRYGFGVRLADRESVQTLLGRIAMDIEISRLLTMKAAWELDR 319

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                +E + A+I A  T +            A++  G  GY ++  +   YR +    +
Sbjct: 320 GGLARKEVSMAKIKAANTLHLA-------ADSAIQINGARGYSKDTVLEWIYRYARQARL 372

Query: 443 LLGSGNAMVLDVLNLLEKGTNLF 465
           + G+     + +   LEK    F
Sbjct: 373 VDGADAVHEMVLNRFLEKEEGAF 395


>gi|327480313|gb|AEA83623.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166]
          Length = 395

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 127/380 (33%), Gaps = 38/380 (10%)

Query: 92  ERWDKVE-FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150
            R D+ + F  A+   +      G   ++    +       A +       +        
Sbjct: 37  RRIDEEKGFPEAFVTAMT---EAGWLSAMIPEQYGGSGLGLA-EASVILEEVNRCGGNSG 92

Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210
            +   + +   +    +    + + PK+ S E                 +G+TE   GTD
Sbjct: 93  TIHGQMYNMFTLLRNGSEEQKRYYLPKLASGELR------------LQSMGVTEPTTGTD 140

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED-- 264
              I +   +  D         W      SD  I+LA+       +     +   L D  
Sbjct: 141 TTKIKTTAVRQGDKYVINGQKVWISRIQHSDLMILLARTTPLAEVQRKSEGMSIFLVDLR 200

Query: 265 -GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDS 320
               NGL  Q + N + N    T EL F N       L+G+       + D         
Sbjct: 201 EAIGNGLTVQPIAN-MVNH--ETNELFFDNLEIPASSLIGEEGKGFRYILDGLNAERTLI 257

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R  + ++  YAR R V G  +     ++  IA+  ++I AA  + +R    +
Sbjct: 258 AAECIGDGRWFVEKSAQYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLMRWRACEEY 317

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           D  ++    A  A+ +A    +             ++  GG G+  E  + R +RE+   
Sbjct: 318 DAGRNAGAAANMAKYLAAKASW-------EAANACLQTHGGFGFANEYDVERKFRETRLY 370

Query: 441 SI-LLGSGNAMVLDVLNLLE 459
            +  + +   +     +LLE
Sbjct: 371 QVAPISTNLILSYVAEHLLE 390


>gi|312140597|ref|YP_004007933.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325675780|ref|ZP_08155464.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|311889936|emb|CBH49253.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|325553751|gb|EGD23429.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 470

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/347 (19%), Positives = 130/347 (37%), Gaps = 32/347 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL- 164
           LL+RS   G+        FE V  ++     +     +A  + G  +     S   VAL 
Sbjct: 145 LLKRSAELGITLINIPEEFEGVASERGAVTNSLVAEALAHGDMGLALPILAPSGVAVALT 204

Query: 165 -MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223
              T    K + P  F+ E  P           A  + ++E R   D  A+ ++  +   
Sbjct: 205 QWGTDSQQKTYLPA-FAGENVP-----------AAAVVVSEPRALFDPFALQTKAVRSPS 252

Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           G           ++  ++ F++ A+++GR         + +    GL  +     +G R+
Sbjct: 253 GYKLNGVKSLVPAAGSAELFVVAAELDGRP-----AFFIVESDTKGLVVEA-DPSMGLRA 306

Query: 284 NATVELEFSNTFGFLLGDLNVS-----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338
                L  ++        L             D   L  L  A ++V   +  L   I Y
Sbjct: 307 AGLGRLVLTDVAVPESAILGDGDADQRAREYADAVRLARLGWASLAVGTSQAVLDYVIPY 366

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  +  +  +   IA+IA+++ +   ++ R A+  ++  S + EAA AR +A 
Sbjct: 367 ANEREAFGEPISHRQAVAFMIANIAIELDSMRLVTLRGASRAEQGLSFAREAALARKLA- 425

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                       +  + ++ +GG G+ +E  + R YR+  A  +  G
Sbjct: 426 ------SDKGMQIGLDGVQLLGGHGFTKEHPVERWYRDLRAIGVAEG 466


>gi|183984627|ref|YP_001852918.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium marinum M]
 gi|183177953|gb|ACC43063.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium marinum M]
          Length = 650

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/424 (17%), Positives = 134/424 (31%), Gaps = 54/424 (12%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLMSPSVTSASMVALMTTP 168
              G         +  +   Q    RA  L   +   L A      S+     + L  +P
Sbjct: 91  AELGCFGMKIPSEYGGLSMSQVAYNRALMLASTVHTSLGALLSAHQSIGVPEPLKLAGSP 150

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YC 227
              K + P+  +                     LTE   G+D A + S    I  G  Y 
Sbjct: 151 EQKKKFLPRCAAG--------------AISAFLLTEPDVGSDPARLASTATPIDGGQAYE 196

Query: 228 LSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           L G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +G R   
Sbjct: 197 LEGVKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFMGLRGIE 256

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYA 339
                            N+     + ++I L  L++  +++  M    A+     A  ++
Sbjct: 257 NGVTRLHRVRVP---KENLIGREGDGLRIALTTLNAGRLAIPAMVTGAAKWSLKIAREWS 313

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  L     +   I+ IA    A  A+        DE ++         I A +
Sbjct: 314 GERVQWGKPLGKHEAVAGKISFIAATTYALEAVVEISGQMADEGRNDIR------IEAAL 367

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNA 449
            K W  +MA  V  E ++  GG GY   E           + +  R+   N I  GS   
Sbjct: 368 AKLWSSEMACQVADELLQIRGGRGYETAESLAARGERAAPVEQSLRDVRINRIFEGSSEI 427

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           M L +            +         G   K    + + + +        A++L + + 
Sbjct: 428 MRLLIAR----------EAVDAHLTAAGDLAKPNTDLRKKAAAAVGASGFYAKWLPQLVF 477

Query: 510 LASS 513
               
Sbjct: 478 GEGQ 481


>gi|152989053|ref|YP_001349979.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|150964211|gb|ABR86236.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+    P   A ++     G   ++    +       A +       +         
Sbjct: 28  RRIDEQRGFPE--AFVKALTDAGWLSAMIPEEYGGSGLGLA-EASVILEEVNRCGGNSGT 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   + +   +    +    + + PK+ S E                 +G+TE   GTD 
Sbjct: 85  VHGQMYNMFTLLRNGSEAQKRFYLPKLASGELR------------LQSMGVTEPTTGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   +  D         W      SD  I+LA+       +     +   L D   
Sbjct: 133 TKIKTTAVRKGDRYVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEGMSIFLVDLRE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 193 AIGKGLTVQPIAN-MVNH--ETNELFFDNLEIPVDSLIGEEGKGFRYILDGLNAERTLIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +D
Sbjct: 250 AECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACREYD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +    A  A+ +A    +             ++  GG G+  E  + R +RE+    
Sbjct: 310 AGLNAGASANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETRLYQ 362

Query: 442 I-LLGSGNAMVLDVLNLLE 459
           +  + +   +     +LLE
Sbjct: 363 VAPISTNLILSYVAEHLLE 381


>gi|312141749|ref|YP_004009085.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311891088|emb|CBH50407.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
          Length = 656

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 113/337 (33%), Gaps = 36/337 (10%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFL 235
           K+   E       P           LTE   G+D A + S      DG  Y L G K + 
Sbjct: 144 KLAGTEEQKKKFLPRCAKGAISAFLLTEPDVGSDPARMASTATPTDDGSAYLLDGVKLWT 203

Query: 236 SSPM-SDAFIMLAQV---EGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           ++ + ++  +++A+V   EGR G         +   + +    G+  +     +G R   
Sbjct: 204 TNGVVAELLVVMARVPRSEGRPGEPGSGHRGGISAFVVEADSPGITVEHRNAFMGLRGIE 263

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYA 339
                 +          N+     + +KI L  L++  +++  M    A+     A  ++
Sbjct: 264 NGVTRLNQVRVPA---ENLVGREGDGLKIALTTLNAGRLAIPAMCAGAAKWSLKIAREWS 320

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
             R   G  + +   +   I+ IA    A  A+        DE ++         I A +
Sbjct: 321 AERVQWGRPVGEHGAVAAKISFIAATAYALEAVLDLAGRMSDEGRNDIR------IEAAL 374

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEER----------SIARHYRESPANSILLGSGNA 449
            K W  +MA  +  + ++  GG GY               + +  R+   N I  GS   
Sbjct: 375 AKLWSSEMACWIADDLVQIRGGRGYETAASLAARGERAVPVEQLLRDLRINRIFEGSSEI 434

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
           M L +               +  + +L    K  +  
Sbjct: 435 MRLLIAREAVDAHLAAAGDLADPKANLQHKAKAALGA 471


>gi|254821119|ref|ZP_05226120.1| FadE24 [Mycobacterium intracellulare ATCC 13950]
          Length = 465

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 127/362 (35%), Gaps = 32/362 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P    L+ ++   G+        F+ +   ++          +A  + 
Sbjct: 127 PAAHDADEAATYP--QDLIAKAAELGITAINIPEDFDGIAAHRSSVTNVLVAEALAYGDM 184

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G  +          AL    +      + P+ F+ E  P              + + E +
Sbjct: 185 GLALPLLAPGGVASALTHWGSADQQATYLPE-FAGENVPQ-----------ACVAIAEPQ 232

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
              D   + +   +   G           ++  ++ FI+ AQ++G+   F+V     + S
Sbjct: 233 PLFDPTRLKTTAVRTPSGYRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESS 287

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIM 323
             GL   +    +G R+ A   +E S     L   L       +   +   L  L  A +
Sbjct: 288 AKGLTV-KADPSMGLRAAALGHVELSGVSVPLGARLGEDDASDQDYSEAIALSRLGWAAL 346

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V      L   + Y + R   G  +  +  +    A+IA+++     +++R A   ++ 
Sbjct: 347 TVGTSHAVLDYVVPYVKEREAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGAARAEQG 406

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
                EAA A+ +              +  + ++ +GG GY +E  + R YR+  A  + 
Sbjct: 407 LPFIREAALAKRL-------GADKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRAIGVA 459

Query: 444 LG 445
            G
Sbjct: 460 EG 461


>gi|108800169|ref|YP_640366.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119869297|ref|YP_939249.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp.
           KMS]
 gi|108770588|gb|ABG09310.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119695386|gb|ABL92459.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
          Length = 384

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 115/356 (32%), Gaps = 48/356 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +     G         +                   A       +       +++  
Sbjct: 40  ELWQAVGKQGFLGVNLSEQYGGGGGGIYDMQIVGEELAAAGCPLLMTVVSPTICGTIIQA 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + W P I S E               +   +TE   G++   I++  ++  D 
Sbjct: 100 FGSEELKQQWLPGIASGE-------------TIMAFAITEPDAGSNSHNISTTAKRDGDD 146

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC--------YQR 274
            + ++G K+++S    ++A +++ +      G  L+  L+      GL            
Sbjct: 147 -WVINGTKYYISGVDEAEAILVVTRTSTNDSGRGLLSLLVVPTDVPGLTKSLIPVQAVTP 205

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            K            L F +       L+G  N     V        +  A +     R +
Sbjct: 206 EKQ---------FTLFFDDVRVPAANLIGAENEGLRQVFMGLNPERIMGAALGNGIGRYA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YAR RHV G  +     +   +A   + +  A  ++ R A+  D     S EA+
Sbjct: 257 LDKAADYARNRHVWGTPIGSHQGVSHPLAHAKIQVELARLMTQRAASLHDAGDPGSGEAS 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI------ARHYRESPANS 441
                  + KY   +     + +A++  GG+G   E  +      AR  R +P + 
Sbjct: 317 ------NMAKYAAAEAGILALDQAIQTHGGNGMATEYGLATLWGPARLMRTAPISR 366


>gi|239611288|gb|EEQ88275.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3]
 gi|327348706|gb|EGE77563.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188]
          Length = 516

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 133/390 (34%), Gaps = 34/390 (8%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY----------- 141
            D   +  A    L    I  GL   + + +   +       +   +L+           
Sbjct: 131 VDVHVYPEAQEKELDGTYISQGLVDKMAETNLLAMRLGPGPHLHGRKLFGGEVKGEEFDY 190

Query: 142 ---LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              L+   E     +      +M  +M +    + W      +E               +
Sbjct: 191 FHDLIVAQELARANARGFQDGNMAGMMISLTAVRQWLKN---KELRERVTEESLSGKKFM 247

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            L +TE   G+D+A I +   K  DG         KW  +   +D F+   + E      
Sbjct: 248 CLAVTEAFAGSDVAGIRTTATKTPDGKHYIINGTKKWITNGMWADYFVTACRTEKGFSVI 307

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
           L+PR         +  +R+K      + AT  ++F N       LLG+ +     +    
Sbjct: 308 LIPR------DENVETKRIKTSYST-AAATTFIQFDNVKVPVENLLGEEHKGFIVIMSNF 360

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                      +   R  + E + +A +R V G  LI QPV+++ +A +   + A+ +  
Sbjct: 361 NHERWAMTCSVIRWGRTVVEECLKWANQRIVFGKPLISQPVIRQKLAKMISLVEASQSWL 420

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSI 430
             +        S  E++ +      + K +  + A  +  +A+   GG G  +    R +
Sbjct: 421 ETITYQMCN-MSYEEQSKHLGGPIGLLKSYATRCAHDIADDAVNIFGGRGLTQTGMGRVV 479

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R    ++IL G+   +    +    K
Sbjct: 480 EQFHRTYKFDAILGGTEEILADLGVRQAMK 509


>gi|302554512|ref|ZP_07306854.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472130|gb|EFL35223.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 649

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 98/296 (33%), Gaps = 24/296 (8%)

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
           K+F  E       P    +      LTE   G+D A + +      D         W  +
Sbjct: 155 KLFGTEEQKERFLPRCARTDISAFLLTEPDVGSDPARLATTAVPDGDDYVLDGVKLWTTN 214

Query: 237 SPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
             ++D  +++A+V    G    +   + + +  G+  +     +G R        F    
Sbjct: 215 GVVADLLVVMARVPKSEGHRGGITAFIVETNAPGVTVENRNAFMGLRGIENGVTRFHQVR 274

Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILI 350
                 +      ++    L  L++  +S     V+  +  L  A  ++  R   G  + 
Sbjct: 275 VPAANRVGEEGQGLK--IALTTLNTGRLSLPASCVAAGKWCLKIAREWSAAREQWGKPVA 332

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
               +   I+ IA    A  A++   +   DE ++         I   + K +  +MA  
Sbjct: 333 HHEAVGSKISFIAATTFALEAVTDLASQMADENRNDIR------IEGALAKLYASEMAWT 386

Query: 411 VIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNAMVLDVLN 456
           +  E ++  GG G+   E             +  R+   N I  GS   M L +  
Sbjct: 387 MADELVQIRGGRGFETAESLRARGERGVPAEQLLRDLRINRIFEGSTEIMHLLIAR 442


>gi|322370171|ref|ZP_08044733.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
 gi|320550507|gb|EFW92159.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253]
          Length = 405

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 117/365 (32%), Gaps = 34/365 (9%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA---ARLYLMAQLEAGHLMSPSVTSAS 160
             L   +    ++          +       +     A   L+    A  + +P   +  
Sbjct: 43  RQLRETAREYDVYAPQIPEEHGGMGMDFGEVLPVFEEAGRSLLGP-TAIRVDAPDEGNMH 101

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR--GGTDIAAITSQG 218
            + L+ T    + W   + + E                G  +TE     G+D   + +  
Sbjct: 102 TLELVGTEEQKERWLDPLVAGE-------------AKSGFSMTEPNTGAGSDPKMLRTTA 148

Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLK 276
           ++  D  + ++GHKW+ +    +D  +++A  +            L      G+   R  
Sbjct: 149 EQDGDE-WVINGHKWWTTQGSEADVLLVMALTDLDAHPYDGCSIFLVPADTPGVEIVRDI 207

Query: 277 NKIG--NRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
             +G      +  E+++ N       LLG  N      +       L   +        +
Sbjct: 208 PHVGGGVTGMSHAEIKYENVRIPEENLLGAENAGFAIAQRRLGPARLTHCMRYSGMAERA 267

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           +  A  YA +R    G L ++  ++  +ADI + + A   +    A      +    E A
Sbjct: 268 IDIAKAYADQRQAFDGPLSEKQSIRFEVADIEMRLHAVRTMVRHAARQIAAGEEARIEVA 327

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
                   +K +   +    I  A++  GG+G  ++  +A  Y       I+ G+     
Sbjct: 328 M-------SKVYAANVVQDAIDAAIQICGGNGIGKDLPLADFYENVRQFRIVDGADEVHE 380

Query: 452 LDVLN 456
             +  
Sbjct: 381 RVIAR 385


>gi|260578415|ref|ZP_05846329.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
 gi|258603437|gb|EEW16700.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734]
          Length = 402

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 100/277 (36%), Gaps = 23/277 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR 252
             +   + +TE + G+D AA+ +  +   D  Y L+G K F+++      ++  A V+  
Sbjct: 126 GKIWAAMAITEPQFGSDSAAVAATAKLDGDE-YVLNGEKIFVTAGERCTHVVVWASVDKS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
            G   +   +      G    RL++K+G RS+ T      N        L    V T   
Sbjct: 185 AGRAAIKSFVVPRDTPGFELVRLEHKLGIRSSDTAHFILDNVRIPKENLLGSPEVDTKKG 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------GGILIDQPVMKRAIA 360
               ++   D+    V+ M V +A A    + R +               +QP       
Sbjct: 245 FGG-VMATFDNTRPMVAAMAVGVARASLE-KLREILTDAGVEIDYDAPAWNQPAAASEYI 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  ++ R     D  +  S+E       A   K    +MA  +   A+E  G
Sbjct: 303 RLESDWEAAYLMTLRAGWMADNKQPNSKE-------ASECKAKAGRMATDLTLRAVEIAG 355

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             GY E   + +  R+S    I  G+     L V   
Sbjct: 356 AYGYSERDLLEKWARDSKILDIFEGTQQIQQLVVARR 392


>gi|239933261|ref|ZP_04690214.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291441611|ref|ZP_06581001.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291344506|gb|EFE71462.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 403

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 135/371 (36%), Gaps = 41/371 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L   +   G+        +       R +A     A   L   L A ++ +P   +  M
Sbjct: 47  RLQEAARGAGVFAPHVSPEYGGHGLDMRGRALVFEEAGYSLFGPL-ALNIAAPDEGNMHM 105

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
           +  + TP   + +               P+ +  V     +TE     G+D +A+T++ +
Sbjct: 106 LEAIATPEQKERYL-------------RPLAEGRVRSCFAMTEPAPGAGSDPSALTTRAE 152

Query: 220 KISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKN 277
           K+S G + + G KWF++     A+ I +A+  G  G        L      G+   R  +
Sbjct: 153 KVSGG-WRIEGRKWFITGADGAAYAICMARTSGEPGTRGGATMFLVGADNPGMKIVRHID 211

Query: 278 KI-----GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329
            +     G       E+ F +       +LG+++      +       +   +  +   R
Sbjct: 212 TLDEAFFGGH----CEVLFDDCVVPDEAVLGEVDKGFEYAQVRLGPARMTHCMRWLGIAR 267

Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389
            +   A+  A  R + G  L +  ++++ IAD  +D+AA+  L  +     D+ +S ++ 
Sbjct: 268 RAQDIAVARAADRQLFGSRLAELGMVQQMIADNEIDVAASRGLILQACRELDQGRSGAQ- 326

Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449
                    I K +  +    V+  +++  G  G   +  ++R  RE     I  G    
Sbjct: 327 ------STAIAKTFTAEAVWRVVDRSLQICGALGISGDVLLSRFLREVRPFRIYDGPSET 380

Query: 450 MVLDVLNLLEK 460
               +   + +
Sbjct: 381 HRWAIARRVVR 391


>gi|213622386|ref|ZP_03375169.1| crotonobetainyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 243

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 11/248 (4%)

Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275
           +   + +  +Y      +  SS  +   +++A+        +      D S  G+   +L
Sbjct: 1   TTYTRKNGKVYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKL 60

Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           + K+G R ++  E+ F +       + G        V++         A+ +      + 
Sbjct: 61  E-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCTF 119

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
            +A  YA +R   G  +    +++   A +A+ + +   +    A   D     S +AA 
Sbjct: 120 EDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAM 179

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
                   KY+C   A  V+  AM+ +GG G      I R +R+   + +  GS    +L
Sbjct: 180 -------CKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQIL 232

Query: 453 DVLNLLEK 460
            +   + K
Sbjct: 233 TLGRAVLK 240


>gi|323508246|emb|CBQ68117.1| related to Acyl-CoA dehydrogenase [Sporisorium reilianum]
          Length = 403

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 128/376 (34%), Gaps = 49/376 (13%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH-KIRAARLYLMAQLEAGHL-- 151
           D    H    A     ++D L    W     P     A   I  A + L    E+G    
Sbjct: 26  DDYWMHKDHAAEYPHELYDALSAGRWIGICMPESLGGAGLGISEATVMLQTIAESGAAVA 85

Query: 152 ----MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
               +  ++     +    TP  H DW PK+                 +    G+TE   
Sbjct: 86  GAQSIHANIYPLMPIIEFATPEQHADWLPKMIDG-------------RIRSCFGITEPTT 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG-------CFLVP 259
           G++   + ++  +  D         W  S+ ++   ++LA+  E   G        F  P
Sbjct: 133 GSETLKLKTKAVRKGDKYVVNGSKIWTSSAQVASHMVLLARTSEPEAGSRSSGLSLFFAP 192

Query: 260 RLLEDGSPN---------GLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTG 307
                 +P          G+  +++  K+G  +    E+ F +       L+G+      
Sbjct: 193 LRSVPNTPQNAGKAELARGVEMRKIA-KMGGNTVDANEVWFDDFEVPADCLIGEEGRGFK 251

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367
            V           A  ++     +L +A+ YA  R V G  +     ++  +A     + 
Sbjct: 252 YVLHGMNAERCLLAGEALGTGYAALRKAVKYAGDRVVFGKPIGAMQAIQHPLAKSWAQLE 311

Query: 368 AATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426
           AA  L++  A  +D+    +   A  A+ MA    Y  C+ A       +  +GG GY +
Sbjct: 312 AARHLTYAAARMYDDRAPDAGAQANAAKYMAAEAGYSACETA-------VMTLGGMGYAK 364

Query: 427 ERSIARHYRESPANSI 442
           E  + R +RE     +
Sbjct: 365 EFHVERLFREILVPRL 380


>gi|111224159|ref|YP_714953.1| putative medium-chain acyl-CoA dehydrogenase [Frankia alni ACN14a]
 gi|111151691|emb|CAJ63410.1| Putative medium-chain Acyl-CoA dehydrogenase [Frankia alni ACN14a]
          Length = 409

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/414 (16%), Positives = 134/414 (32%), Gaps = 37/414 (8%)

Query: 56  KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115
           +EL  L E V S    E+        P+L A+GP     D++        L+  +   GL
Sbjct: 8   QELVDLRERVRSFVENEIVPF--ERDPRLTAHGPT----DELR-----QDLVGLARKAGL 56

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175
                 R F    R+  H I  A +Y  A       ++ +  +            +    
Sbjct: 57  LTIQAPRRFGG--RELTH-IEQAVVYEAAGWSTLGPVAMNCAAP--------DEANMGLL 105

Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWF 234
            KI   E       P+ +        +TE    G+D   + ++  +  D     +G KW 
Sbjct: 106 AKIADPEQQEEFLRPVIEGGARSVFAMTEPGGAGSDPNQLLTEAVRDGDDFVV-NGRKWL 164

Query: 235 LSSPMSD-AFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN-ATVELEF 291
           ++       +I++A+   G  G       L  G   G+  +R+ N +          + F
Sbjct: 165 ITGANGALTWIIMARLAPGADGLGGPTLFLTRGDTPGIEVERVMNTMDRNYVEGHGVVTF 224

Query: 292 SN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348
            +       +LG    +    +       L   +  +     + + A+ +AR R   G  
Sbjct: 225 RDLRLPASAVLGTPGDAFRYAQLRLTPARLTHCMRWLGAADRAHSIAVEHARTRTAFGRP 284

Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408
           + +   +   +AD  + +       +      D  +    E       A   K +  +  
Sbjct: 285 IGEHQGVGFQLADNEIALDNCRLAIWHACWLLDRGEQGRHE-------ASKVKCYVSEEL 337

Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
             V    ++ +GG G  +E  +   +R+  A  +  G        V   L +  
Sbjct: 338 FRVADRCVQVLGGIGVTDETVVEMIFRDIRAFRLYDGPTEVHKHAVARRLLRAR 391


>gi|107027353|ref|YP_624864.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054]
 gi|116693937|ref|YP_839470.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105896727|gb|ABF79891.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116651937|gb|ABK12577.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 414

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 126/375 (33%), Gaps = 37/375 (9%)

Query: 105 ALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGH----LMSPSVTSA 159
            L  R+  +GL          +       +   A    +M ++          +P   + 
Sbjct: 47  ELKERAKAEGLWNLFLPHLKDDEPGMGLTNLEYAPLAEIMGRVSWASEVFNCNAPDTGNM 106

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQG 218
            ++ +  TP   + W               P+ +  +     +TE     +D   IT++ 
Sbjct: 107 ELLHMFATPEQREQWL-------------LPLLRGEIRSAFAMTEPDVASSDATNITTRI 153

Query: 219 QKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQR 274
           +++ D  Y ++G KWF+++   P    FI++ + +           +L      G+   R
Sbjct: 154 ERVGDE-YVINGRKWFITNAAHPNCKIFIVMGKTDPEAESHQQQSMILVPRDTPGVTVVR 212

Query: 275 LKNKIGNRS-NATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330
               + + +     E+ F N       LLG+        +       +   + S+    +
Sbjct: 213 NITVVNHHAPEGHCEITFDNVRVPARNLLGEEGSGFALAQARLGPGRIHHCMRSIGAAEL 272

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSE 388
           +L   +  A+ R   G  L     +   IA   ++I  A  L  + A   D+  AK+  +
Sbjct: 273 ALELMVDRAQSRVAFGKPLNRHGTVGEWIARSRIEIDQARLLVLKAAWMIDKVGAKAARK 332

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
           E +  + + P            V   AM+  G +G   +  +A  +    A     G   
Sbjct: 333 EISMIKALVPTVY-------TDVCDRAMQVFGAAGLSPDTPLADLWTWGRALRFADGPDE 385

Query: 449 AMVLDVLNLLEKGTN 463
             +  +  +  KG  
Sbjct: 386 VHLQAIARMEIKGGE 400


>gi|261883873|ref|ZP_06007912.1| Acyl-CoA dehydrogenase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 189

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248
           PM + S     GLTE    +D   + +  +   D  Y L+G K F+++  ++D +I+ A 
Sbjct: 16  PMAEGSKIFAYGLTELFSCSDAGGVKTSAKLDGDH-YVLNGSKIFITNGGVADIYIVFAV 74

Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-NVSTG 307
            +           + +    G    + + K+G RS+ T E+ F N        L     G
Sbjct: 75  TDPESKHKGTSAFIVEKDFEGFSVGKKEKKLGIRSSPTTEIIFDNCRVPKENLLCEEGEG 134

Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350
            +  MK    LD     ++   V +A+     A++Y++ R   G  ++
Sbjct: 135 FIIAMK---TLDGGRNGIAAQAVGIAQSALDAAVNYSKERVXFGKPVV 179


>gi|118466268|ref|YP_883171.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118167555|gb|ABK68452.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
          Length = 463

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 127/362 (35%), Gaps = 32/362 (8%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     D+   +P    L+ ++   G+        F+ +   ++          +A  + 
Sbjct: 125 PAAHDADEAATYP--RDLIAKAAELGITAINIPEDFDGIAAHRSSVTNVLVAEALAYGDM 182

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G  +          AL    +      + P+ F+ E  P              + + E +
Sbjct: 183 GLALPLLAPGGVASALTHWGSAEQQATYLPE-FAGENVPQ-----------ACVAIAEPQ 230

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
              D   + +   +   G           ++  ++ FI+ AQ++G+   F+V     + S
Sbjct: 231 PLFDPTRLKTSAVRTPSGYRLDGVKSLVPAAADAELFIVGAQLDGKPALFIV-----ESS 285

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIM 323
             GL   +    +G R+     +E S     L   L       +   +   L  L  A +
Sbjct: 286 TKGLTV-KADPSMGIRAAELGHVELSGVTVPLGARLGEDEATDDDYSEAIALSRLGWAAL 344

Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383
           +V      L   + Y + R   G  +  +  +    A+IA+++     +++R A   ++ 
Sbjct: 345 TVGTSHAVLDYVVPYVKEREAFGEPIARRQAVAFMCANIAIELDGLRLITWRGAARAEQG 404

Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443
              + EAA A+ +              + ++ ++ +GG GY  E  + R YR+  A  + 
Sbjct: 405 LPFAREAALAKRL-------GADKGMQIGSDGVQLLGGHGYTNEHPVERWYRDLRAIGVA 457

Query: 444 LG 445
            G
Sbjct: 458 EG 459


>gi|119478554|ref|ZP_01618497.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119448458|gb|EAW29707.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 418

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 123/369 (33%), Gaps = 32/369 (8%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSAS 160
           +  L   +   GL        +  +            +   +        ++ PS  + S
Sbjct: 60  YEELRNHTREQGLWKPHLPEEYGGMGAGFLTLAYMNEIMAWSPYSQSCFGIVPPSAGNES 119

Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG-GTDIAAITSQGQ 219
           ++A   +P   + W               P  +  +     +TE    G+D  ++ +   
Sbjct: 120 VLAKYASPAQIEKWL-------------LPSVRGEMQSCFSMTEPDAPGSDPRSLQTTAT 166

Query: 220 KISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV----PRLLEDGSPNGLCYQR 274
              D  + ++G KWF S+   +D  I++ + E       V     +++      G  + R
Sbjct: 167 LDGDE-WVINGRKWFTSNARNADFAIVMCRTETADDDGNVNSKMTQIIVPTDSPGFEHVR 225

Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVS 331
                G+   +  E+ ++N        L          +D      +   +  V  M  +
Sbjct: 226 DIPVWGHTGGSHGEIRYNNVRVPKENALGQRGTGHAAAQDRLGAGRVYHCMNCVGSMWRA 285

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
               +  A  R V GG L ++  ++  IAD  +DI AA  ++   A   +  +    + +
Sbjct: 286 FDLMVKRATEREVHGGKLEEKQFIQGFIADSYMDIQAARLMTIHTAEIIESGRDPRTDIS 345

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451
             ++  P   +        V+  A++  GG G   E  +A  Y  +    +  G      
Sbjct: 346 AIKVFVPAAMH-------RVVDRAIQTFGGIGVSTEHPLAGFYLAARTLRLADGPDEVHK 398

Query: 452 LDVLNLLEK 460
           + +   + K
Sbjct: 399 ILIAKNILK 407


>gi|170581352|ref|XP_001895647.1| isovaleryl-CoA dehydrogenase [Brugia malayi]
 gi|158597329|gb|EDP35503.1| isovaleryl-CoA dehydrogenase, putative [Brugia malayi]
          Length = 369

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 124/340 (36%), Gaps = 29/340 (8%)

Query: 87  YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMA 144
             P  + W+  +  PA H L ++    G+        +  +    ++ I  A     +  
Sbjct: 37  INPYVDEWEAQKHFPA-HTLFKKLGLLGIFGVNKPAGYGGLGLDFSYSIAIAEELGRINC 95

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 +   S  +   +++  +  + +++                     +   LG++E
Sbjct: 96  AAIPMAIAVQSDMATPALSMHGSDYLKREFL-------------HATLDGDLVACLGVSE 142

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLE 263
              G+D+AAI +  +   + +      +W  +   +D   +LA    +         +  
Sbjct: 143 ACAGSDVAAIRTTARWHGNDLIIDGSKQWITNGTQADWICLLANTNDKPSPYRNKSLICV 202

Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323
             +  G+       K+G  S+ T E+ F+N        +    G     ++L + D  ++
Sbjct: 203 PLNEPGVHRSNCIEKLGMHSSDTAEIYFNNVRVPSRNIIG-EEGHGFVYQMLQFQDERLV 261

Query: 324 SVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379
           +++     M+  +   I Y R+R V  G ++D  ++   +A++  DI A  +L +R    
Sbjct: 262 AIAVLLEPMQKIIDMTIDYTRQRRVFDGTILDNQIVHYRLAELQTDIEAVRSLLYRAVME 321

Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
               K          ++A + K    ++A AV    ++ +
Sbjct: 322 RLLGKD-------VTMLASMGKLKASRLARAVTDSCIQVL 354


>gi|66045416|ref|YP_235257.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
 gi|63256123|gb|AAY37219.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central
           region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas
           syringae pv. syringae B728a]
          Length = 387

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 132/404 (32%), Gaps = 46/404 (11%)

Query: 78  NYNTPQLHAYGPGGERWDKVEFHPAWHA-----------LLRRSIHDGLHCSIWDRSFEP 126
           + N+ +L+A    G R    EF  A+              ++     G   ++    +  
Sbjct: 3   DRNSEELNAI-REGVRALCAEFDAAYWRKVDEEKGFPETFVKALTDAGWLAAMIPVEYGG 61

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186
                A +       +         +   + +   +    +      + PK+ S E    
Sbjct: 62  SGLGLA-EASVILEEVNRCGGNSGTVHGQMYNMFTLLRHGSEAQKSYYLPKLASGELR-- 118

Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246
                        +G+TE   GTD   I +   +  D         W      SD  I+L
Sbjct: 119 ----------LQSMGVTEPTTGTDTTKIKTTAVRKGDKYVINGQKVWISRVQHSDLMILL 168

Query: 247 AQVEG----RVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF-- 297
           A+       +     +   L D      NG+  Q + N + N    T EL F N      
Sbjct: 169 ARTTPLTDVKKKSEGMSIFLVDLREAIGNGMTVQPIAN-MVNH--ETNELFFDNLEIPAD 225

Query: 298 -LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            L+G+       + D         A   +   R  + +A  YAR R V G  +     ++
Sbjct: 226 SLIGEEGKGFRYILDGLNAERTLIAAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQ 285

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             IA+  ++I AA  + +R    +D   +    A  A+ +A    +             +
Sbjct: 286 FPIAEAHIEIEAADLMRWRACEEYDSGINAGASANMAKYLAAKASW-------EAANACL 338

Query: 417 ECIGGSGYIEERSIARHYRESPANSI-LLGSGNAMVLDVLNLLE 459
           +  GG G+  E  + R +RE+    +  + +   +     +LLE
Sbjct: 339 QTHGGFGFACEYDVERKFRETRLYQVAPISTNLILSYVAEHLLE 382


>gi|328885852|emb|CCA59091.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 400

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 105/316 (33%), Gaps = 26/316 (8%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           EA   ++        VA   TP     W P+  +                     L+E  
Sbjct: 75  EAETALALQGLGTHPVAAFGTPAQRARWLPEATAG-------------RAVAAFALSEPD 121

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D AA+  + +    G + L G K W  ++P +D   + A+     G   V   L   
Sbjct: 122 AGSDAAALALEARPDGAGGWRLHGEKRWISNAPEADFATVFARTTQGAGSRGVTAFLVPA 181

Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAI 322
              GL  + L + +   +  T  L F         LLG+ +           L       
Sbjct: 182 DRPGLGGEAL-DMLAPHALGT--LTFDGVPVGPDDLLGEPDQGFRVAMHTLNLFRPSVGA 238

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            +V   + +L  A+ +   R   GG L D   +   IA++A    AA  L +  A ++DE
Sbjct: 239 FAVGMAQAALDAALAHTAARPAFGGHLADLQAVAHRIAEMATRTEAARLLVYAAATAYDE 298

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                         + + K    + A  V+  A++  G         +   YRE  A  I
Sbjct: 299 GDPD------VPRRSAMAKLLATETAQYVVDAAVQLHGARALQRGHLLEHLYREVRAPRI 352

Query: 443 LLGSGNAMVLDVLNLL 458
             G+       +   L
Sbjct: 353 YEGATEVQRTIIAKEL 368


>gi|258651122|ref|YP_003200278.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258554347|gb|ACV77289.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 384

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 110/351 (31%), Gaps = 27/351 (7%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             G   +            +                 G+L         ++A    P V 
Sbjct: 46  RRGFIGAEIAPELGGRGESRLTSGLLLEQIATGDFNIGYLQVVGSLVGQILAGNARPEVA 105

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI---YCL 228
           ++W P+             +   +  +G+GL+E  GG+D      + ++   G    + +
Sbjct: 106 QEWVPQ-------------ITGGTGVVGIGLSEPTGGSDAGNPQMRAERDGSGDGADWLI 152

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
           +G K           ++ A+         +   + D +  GL  +   + +G +      
Sbjct: 153 TGAKSMSLMEYCTGAVVFARTGDEGRGRGMTAFVVDLTGPGLTREPYSD-MGTKPVRRGA 211

Query: 289 LEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345
           + F         +LG++      V            +  V   + ++ E   Y  +R   
Sbjct: 212 IHFDRVRVPARNVLGEVGQGFTSVMQGFDFSRALIGLQCVGAAQQTVDETWAYVSQRQAF 271

Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405
              +     +   +A+    +AAA  L ++     D     + EAA  +  AP       
Sbjct: 272 DRPISTFQGVSFPLAESETLLAAARMLCYQTLWLKDAGLPHTAEAAMCKWWAP------- 324

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
           K A  VI   +   G  GY  E+ I +  R+     I  G+   M L +  
Sbjct: 325 KTAYDVINSCLLLHGQYGYRTEKPIEQRLRDVLGLQIGDGTAQIMKLIIAR 375


>gi|167722582|ref|ZP_02405818.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98]
          Length = 669

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 139/419 (33%), Gaps = 33/419 (7%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
           +GL     DR++  +       ++  ++L  +    A  +   +      + L   P + 
Sbjct: 58  EGLLGMQIDRAYGGLGLTNREMLQVVSQLATIDSTLAFFVGLNNTLGIRPIMLHAQPALR 117

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
            +  P + +                     LTE   G++  AI S  Q++  G + +SG 
Sbjct: 118 DELLPLLATG-------------RTLAAFALTEPDAGSNARAIASVAQRVDGGHWVVSGR 164

Query: 232 KWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
           K +  SS  +    + A+     G   +          GL        +G R      L 
Sbjct: 165 KSWSGSSAWAGVINVFAKQADGAGMVGLALR---QGTPGLRIGAEDLTMGVRGMIQNTLH 221

Query: 291 FSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347
                      LG         +       L    + V  M+        YA RR +  G
Sbjct: 222 LERARVSDACRLGAPGQGMAVAQQTMNFARLGIGAVCVGAMKRCAQLMHRYAARRRIGTG 281

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
           +L+D P+ ++ + D+   I A +AL  +LA  FD  +   E+         I K    + 
Sbjct: 282 LLLDHPLSRQRLGDLRHRIDALSALIEQLAADFDAGRDAPEDGLL------IAKILGSEC 335

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
                 E M+ +GG GYIE     + +R++    I  G    ++  + + L  G +    
Sbjct: 336 LSQTSDELMQMLGGRGYIETNVAPQLFRDARLPRIFEGPTETLLAHLGSRLLNGGDDLLG 395

Query: 468 LFST------LEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520
                     L  +L   G++++     +          A ++   +   +  A L   
Sbjct: 396 YLGERSGALALAAELRGLGEQLLEDGLANADALGGAAHAANWVNYWLGSVAQWALLLAV 454


>gi|319778764|ref|YP_004129677.1| acyl-CoA dehydrogenase [Taylorella equigenitalis MCE9]
 gi|317108788|gb|ADU91534.1| acyl-CoA dehydrogenase [Taylorella equigenitalis MCE9]
          Length = 388

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 114/361 (31%), Gaps = 35/361 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+   +P     +      G   ++    +         +       +         
Sbjct: 30  RRVDEERGYPE--EFVDTLTQAGWLAALIPEMYGGSGLSLT-EATVIMEEINRCGGNSGA 86

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   + +   +    +      + PKI S E                 +G+TE   GTD 
Sbjct: 87  VHGQMYNMGTLLRHGSEEQKHLYLPKIASGELR------------LQSMGVTEPTTGTDT 134

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   +  D         W      SD  I+LA+             +   L D   
Sbjct: 135 TKIKTTAVRKGDRYIVNGQKVWISRVQHSDLMILLARTTPIEQCEKKSHGMSIFLVDIKE 194

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              +G+  Q + N + N    T EL F N       L+G+  +    + D         A
Sbjct: 195 AMSSGMTVQPIPN-MVNH--ETNELFFDNLEIPAENLIGEEGMGFKYILDGLNAERTLIA 251

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +      + +   Y + R V G  +     ++  IA   ++I AA+ + +  +  FD
Sbjct: 252 AECIGDGYWFIDKVSSYVKEREVFGRPIGQNQGVQFPIAKAYINIEAASLMRYEASRLFD 311

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
             K    +A  A+++A    +             ++  GG G+  E  + R +RE+    
Sbjct: 312 AHKPMGAQANMAKLLAADASW-------EAANCCLQFHGGFGFANEYDVERKFRETRLYQ 364

Query: 442 I 442
           +
Sbjct: 365 V 365


>gi|296391866|ref|ZP_06881341.1| butyryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
          Length = 386

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 109/294 (37%), Gaps = 40/294 (13%)

Query: 251 GRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302
             +  F+VP+ L +     G  N +    L +K+G R   +  L F +     G+L+G  
Sbjct: 10  KGISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFGDNGACVGYLVGKP 69

Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GG-------ILID 351
           +     +  M     +   + +V         ++ YAR R       G         +I 
Sbjct: 70  HHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARERPQGRLPDGKDPSAPQVAIIR 129

Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCC 405
              ++R +      +  A  L    A  FD+       + R +      ++ PI K W  
Sbjct: 130 HADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQAHELLDLLTPIVKSWPS 189

Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465
           +        A++ +GG GY  E  + ++YR++  N I  G+     LD+L          
Sbjct: 190 EFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG--------- 240

Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA--RFLTEKIALASSAAAL 517
                 + Q+ G+  +++  +++D+    +    LA  R   E++    S   L
Sbjct: 241 ----RKVGQNNGAGLRQLTRLIQDACRRAEAHPSLAALRQPLERLVARLSEVTL 290


>gi|296268520|ref|YP_003651152.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091307|gb|ADG87259.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM
           43833]
          Length = 623

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 129/392 (32%), Gaps = 35/392 (8%)

Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKD- 173
           +  I D   + +    A  +     Y    L   H   + ++T++   AL      H+  
Sbjct: 74  NAMIPDEVVKGLAEIGAFGMTIGEEYGGLGLSHYHYCKALALTASYSPALCALLSAHQSI 133

Query: 174 WAPK---IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
             PK   +F  E       P           LTE   G+D A +++   +  D       
Sbjct: 134 GVPKPIQLFGTEEQKRRFLPRCARGEISAFLLTEPDVGSDPARLSTTAVRDGDSYVIDGV 193

Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290
             W  +  ++D  +++A+   +     +   + +    G+  +   + +G R        
Sbjct: 194 KLWTTNGVVADLLVVMARTGEK-----ISAFVVEADSPGITVENRNSFMGLRGIENGVTR 248

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV-----SGMRVSLAEAIHYARRRHV 344
           F           N+     + +KI L  L++  +S+       ++ +L  A  +  +R  
Sbjct: 249 FHQVRVPA---ENLIGREGQGLKIALTTLNTGRLSLPATCAGAVKWALKIAREWGDQRVQ 305

Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404
            G  +     + + IA IA    A  A+        D+ ++         I A + K + 
Sbjct: 306 WGKRIGGHEAIAKKIAFIAATAYAIDAIVDLTCRLADDERNDIR------IEAALAKLYA 359

Query: 405 CKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNAMVLDV 454
            +MA   + E ++  GG GY   E             +  R+   N I  GS   M L +
Sbjct: 360 TEMAWLAMDELVQMRGGRGYETAESLHARGERGVPAEQFLRDLRINRIFEGSTEIMHLLI 419

Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486
                             + DL + G+     
Sbjct: 420 AREAVDTHLSVAGALIDPKADLKTKGRAAAKA 451


>gi|261205528|ref|XP_002627501.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239592560|gb|EEQ75141.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 516

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 133/390 (34%), Gaps = 34/390 (8%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY----------- 141
            D   +  A    L    I  GL   + + +   +       +   +L+           
Sbjct: 131 VDVHVYPEAQEKELDGTYISQGLVDKMAETNLLAMRLGPGPHLHGRKLFGGEVKGEEFDY 190

Query: 142 ---LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198
              L+   E     +      +M  +M +    + W      +E               +
Sbjct: 191 FHDLIVAQELARANARGFQDGNMAGMMISLTAVRQWLKN---KELRERVTEESLSGKKFM 247

Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256
            L +TE   G+D+A I +   K  DG         KW  +   +D F+   + E      
Sbjct: 248 CLAVTEAFAGSDVAGIRTTATKTPDGKHYIINGTKKWITNGMWADYFVTACRTEKGFSVI 307

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMK 313
           L+PR         +  +R+K      + AT  ++F N       LLG+ +     +    
Sbjct: 308 LIPR------DENVETKRIKTSYST-AAATTFIQFDNVKVPVENLLGEEHKGFIVIMSNF 360

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
                      +   R  + E + +A +R V G  LI QPV+++ +A +   + A+ +  
Sbjct: 361 NHERWAMTCSVIRWGRTVVEECLKWANQRIVFGKPLISQPVIRQKLAKMISLVEASQSWL 420

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSI 430
             +        S  E++ +      + K +  + A  +  +A+   GG G  +    R +
Sbjct: 421 ETITYQMCN-MSYEEQSKHLGGPIGLLKSYATRCAHDIADDAVNIFGGRGLTQTGMGRVV 479

Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460
            + +R    ++IL G+   +    +    K
Sbjct: 480 EQFHRTYKFDAILGGTEEILADLGVRQAMK 509


>gi|213586298|ref|ZP_03368124.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 176

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 1/176 (0%)

Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
            L GHKWF S P SDA ++LAQ +G + CF VPR L DG  N +  +RLK+K+GNRSNA+
Sbjct: 1   RLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNAS 60

Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            E+EF +T G+ LG+       +  M  +  LD A+ S   MR + + AI++A +R   G
Sbjct: 61  AEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFG 120

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
             LI+QP+M++ ++ +AL +   TAL FRLA ++++ +  ++EA +AR+  P  K+
Sbjct: 121 KPLIEQPLMRQTLSRMALCLEGQTALLFRLARAWEQ-RREAKEALWARLFTPAAKF 175


>gi|297162067|gb|ADI11779.1| acyl-CoA dehydrogenase domain protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 416

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 108/366 (29%), Gaps = 21/366 (5%)

Query: 101 PAWHALL----RRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156
           P W ALL    RR+   GL      R   P V   A         +   L    L   + 
Sbjct: 56  PEWRALLTEMRRRADKAGLL-----RRDLPAVLGGAEASNLEMAVVREHLAHRGLGLHND 110

Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216
                  +   P  H  W  +  S E       P+     ++G  LTE   G+D   + +
Sbjct: 111 LQDESSVVGNFPSAHLVW--RFGSDEQRAQFGEPLVTGERSLGFALTEPEHGSDATWMAT 168

Query: 217 QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRL 275
              +           +W      +   ++ A+  GR G    +   +      G+     
Sbjct: 169 AAVRSGGDWVINGEKRWNTGVDTATHDLVFARTSGRPGDAVGISAFIVPIDAPGVEVGLF 228

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           +    N      ++   +       +LG+        +       +  A  S+   +  +
Sbjct: 229 RWTF-NMPTDHADVALRDVRVPDSAILGEEGQGLEVAQAFVHENRIRQAASSLGAAQYCI 287

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
             ++ YAR R   G  L  +  ++  + ++  D      L    A   D+          
Sbjct: 288 DRSVAYARERVTFGQPLAMRQAVQWPLVELHTDATMLRMLVRGTAQDLDQGSHME----- 342

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              +  +  Y   ++       AM+  GG GY         YR      I  G+    + 
Sbjct: 343 VSDLVSMCNYRANRLVCEAADRAMQVHGGMGYSRHLPFEHIYRHHRRYRITEGAEEIQMR 402

Query: 453 DVLNLL 458
            V   L
Sbjct: 403 KVAGHL 408


>gi|68535361|ref|YP_250066.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
 gi|68262960|emb|CAI36448.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411]
          Length = 402

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 100/277 (36%), Gaps = 23/277 (8%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR 252
             +   + +TE + G+D AA+ +  +   D  Y L+G K F+++      ++  A V+  
Sbjct: 126 GKIWAAMAITEPQFGSDSAAVAATAKLDGDE-YVLNGEKIFVTAGERCTHVVVWASVDKS 184

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN---VSTGPV 309
            G   +   +      G    RL++K+G RS+ T      N        L    V T   
Sbjct: 185 AGRAAIKSFVVPRDTPGFELVRLEHKLGIRSSDTAHFILDNVRIPKENLLGSPEVDTKKG 244

Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---------GGILIDQPVMKRAIA 360
               ++   D+    V+ M V +A A    + R +               +QP       
Sbjct: 245 FGG-VMATFDNTRPMVAAMAVGVARASLE-KLREILTDAGVEIDYDAPAWNQPAAASEYI 302

Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420
            +  D  AA  ++ R     D  +  S+E       A   K    +MA  +   A+E  G
Sbjct: 303 RLESDWEAAYLMTLRAGWMADNKQPNSKE-------ASECKAKAGRMATDLTLRAVEIAG 355

Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
             GY E   + +  R+S    I  G+     L V   
Sbjct: 356 AYGYSERDLLEKWARDSKILDIFEGTQQIQQLVVARR 392


>gi|226364073|ref|YP_002781855.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242562|dbj|BAH52910.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 398

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 118/355 (33%), Gaps = 45/355 (12%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
              L      +G         +         +   +            ++     + S+ 
Sbjct: 51  MQDLWDELGRNGYLGLNIAEEYGGSGAGLTQQAIVSEELAAGGCPELAMVLSQGIAGSVF 110

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               T    + + P I S              +      LTE   G++   +++   +  
Sbjct: 111 GRHGTEEQKRQYLPGIASG-------------AKKFVFALTEPDAGSNSHNVSTTATRDG 157

Query: 223 DGIYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           D  Y + G K+++S     D F+++A+   +   G   +   + D    GL  + +    
Sbjct: 158 DD-YIVKGTKYYISGVDHCDHFLLVARTGTDENTGRGKLTLFVVDPDVEGLTRELI---- 212

Query: 280 GNRSNATV--------ELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
                 T          L F N       ++G+++    P+ D      + SA++     
Sbjct: 213 -----PTALSAPERQFTLFFDNVRIPAERVIGEVDKGLVPLFDGLNPERVLSAVICTGIA 267

Query: 329 RVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
           R ++ +A  Y + R V G   +     ++  +A   +++ AA  ++++ A  +D      
Sbjct: 268 RYAIDKACRYVKERTVWGTTPIGSYQAVQHPLAAAKIELEAARGMTWKAAALYDAGLPAG 327

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
           E A  A+ +A        K     +  A++  GG+G   E  +A  +       I
Sbjct: 328 EAANMAKYLA-------SKAGHHALDTAIQVHGGNGLALEYGLADLWSIVRLQQI 375


>gi|169629151|ref|YP_001702800.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|296165254|ref|ZP_06847801.1| possible long-chain-acyl-CoA dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|169241118|emb|CAM62146.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
 gi|295899443|gb|EFG78902.1| possible long-chain-acyl-CoA dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 384

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 114/356 (32%), Gaps = 48/356 (13%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L +     G         +                   A       +       +++  
Sbjct: 40  ELWQAVGKQGFLGVNLSEQYGGGGGGIYDMQIVGEELAAAGCPLLMTVVSPTICGTIIQA 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             +  + + W P I S E               +   +TE   G++   I++  ++  D 
Sbjct: 100 FGSEELKQQWLPGIASGE-------------TIMAFAITEPDAGSNSHNISTTAKRDGDD 146

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLC--------YQR 274
            + ++G K+++S    ++A +++ +      G  L+  L+      GL            
Sbjct: 147 -WVINGTKYYISGVDEAEAILVVTRTSTNDSGRGLLSLLVVPTDVPGLTKSLIPVQAVTP 205

Query: 275 LKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
            K            L F +       L+G  N     V        +  A +     R +
Sbjct: 206 EKQ---------FTLFFDDVRVPAANLIGTENEGLRQVFMGLNPERIMGAALGNGIGRYA 256

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           L +A  YAR RHV G  +     +   +A   + +  A  ++ R A   D     S EA+
Sbjct: 257 LDKAADYARNRHVWGAPIGSHQGVSHPLAHAKIQVELARLMTQRAAALHDAGDPGSGEAS 316

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI------ARHYRESPANS 441
                  + KY   +     + +A++  GG+G   E  +      AR  R +P + 
Sbjct: 317 ------NMAKYAAAEAGILALDQAIQTHGGNGMATEYGLATLWGPARLMRTAPISR 366


>gi|261199998|ref|XP_002626400.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
 gi|239594608|gb|EEQ77189.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081]
          Length = 428

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 102/362 (28%), Gaps = 49/362 (13%)

Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191
           +H +    + L   L+  H +  +     M+             P               
Sbjct: 49  SHPVYGGGVSLANDLQNEHSVIGNFPIVLMLHHFGNEEQRSTLIP-------------AH 95

Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-------------DGIYCLSGHKWFLSSP 238
            K       GLTE + G+D   + +  +                DG       KW   + 
Sbjct: 96  LKGQFRATFGLTEPKHGSDATFMETAARPAQREYPAGSGAANAVDGFVINGAKKWQTGAH 155

Query: 239 MSDAFIMLAQVEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297
                I+ A+  G  G    +   L      G+     +  + N       +   + F  
Sbjct: 156 NCTHMIIFARTSGAPGSARGITAFLVPRETPGVNILSYEWTL-NMPTDHATVALEDVFVP 214

Query: 298 ---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--SGGILIDQ 352
              +LG+L+      +       +  A  S    R  L +AI YA  R +   G  L D 
Sbjct: 215 RSAVLGELDRGLAIAQTFVHENRIRQAASSCGAARFCLDKAIEYANEREIWGKGKTLSDN 274

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE----------------AKSRSEEAAYARIM 396
             ++  + ++   +     L  R     D+                 K   E        
Sbjct: 275 QAIQFQVVELMTQVEMLRLLILRTGWEMDQVTAECGGHIDSPVPGSKKPWVEIEKRLTHK 334

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             +  +W  ++       A++  GG+GY   +     YR      I  GS    +  +  
Sbjct: 335 VAMCNFWANRLCCQAADRAIQIHGGNGYSRHKPFEHIYRHFRRYRITEGSEEIQMRKIGA 394

Query: 457 LL 458
            L
Sbjct: 395 YL 396


>gi|116200854|ref|XP_001226239.1| hypothetical protein CHGG_10972 [Chaetomium globosum CBS 148.51]
 gi|88175686|gb|EAQ83154.1| hypothetical protein CHGG_10972 [Chaetomium globosum CBS 148.51]
          Length = 446

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 13/293 (4%)

Query: 179 FSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236
           F+RE       P + +      + +TE   G+D+A + ++  + + G  + + G K +++
Sbjct: 141 FAREAVKERVLPGLLRGETRCCIAITEPGAGSDVAGVETRAVRSACGRWWVVDGEKKWIT 200

Query: 237 SPMSDAFIMLAQVEG--RVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSN 293
           + +   +  +A   G    G   +  LL    +  G+  +RL    G  S+ T  +   +
Sbjct: 201 NGIWSDYATMAVRTGPPGSGAKGISLLLVPLKNTPGVKMRRLSVS-GTASSGTTYISLED 259

Query: 294 TFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350
                  LLG+ N     +        L  A  +    RV+L  A  Y  +R   G  L+
Sbjct: 260 VRVPIDHLLGEENQGMRYIMTNFNHERLVVATGATRQARVALTAAFEYVLKREAFGKPLV 319

Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410
           +QPV++  +A     + + TA   + A          +          + K     +   
Sbjct: 320 EQPVVRHRLAKAGALLESQTAWVEQFAYMM-TKMPHEQAGVLLGGPTALLKAHAGMVFKE 378

Query: 411 VIAEAMECIGGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
               A+   GG+GY +    + +   YRE     I  GS + ++   +  L K
Sbjct: 379 CADTAVLLFGGNGYTKTGQGQLVEMLYREVMGTRIPGGSEDVLLDLAVRQLVK 431


>gi|322385545|ref|ZP_08059189.1| acyl-CoA oxidase [Streptococcus cristatus ATCC 51100]
 gi|321270283|gb|EFX53199.1| acyl-CoA oxidase [Streptococcus cristatus ATCC 51100]
          Length = 402

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 112/316 (35%), Gaps = 30/316 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A           + V L    R  K++ PK+ + ++                  LTE   
Sbjct: 105 ATFFTVHGGLCYNTVLLGGDERQQKEFLPKLAAFDWQG-------------CFALTEPLS 151

Query: 208 GTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLED 264
           G+DIA  + +  +++ D        +W   S  +D   + A+   +G+V CF+V      
Sbjct: 152 GSDIAGGLATTAERVGDKWILNGEKRWIGGSDTADVVPVFARDVEDGKVKCFIV-----R 206

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI--YLDSAI 322
               G   + + +K   R      +   N        L    G  +  +IL     D A 
Sbjct: 207 KGAPGYHAEPIPHKTALRCVRNGHITMKNVEVPDSDRLVNINGFGDVARILTFTRADVAH 266

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
           ++ +    S   A+ YA+ R      +    +++  +A +  +  A  + S R+A   + 
Sbjct: 267 IATAITCGSYVAALKYAKDRQQFKRPIAAFQIVQEKLARMQANAVAVLSYSARIAEMQEA 326

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  +A A++   +            +A A E  GG+G   E  +AR + ++ A   
Sbjct: 327 GNELMLNSALAKMHNSLVM-------RETVALARETCGGNGITLETDVARFFADAEAIYT 379

Query: 443 LLGSGNAMVLDVLNLL 458
             GS     L V   +
Sbjct: 380 YEGSHEVNALIVGREI 395


>gi|227539772|ref|ZP_03969821.1| possible acyl-CoA dehydrogenase, long-chain specific
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240414|gb|EEI90429.1| possible acyl-CoA dehydrogenase, long-chain specific
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 187

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 10/181 (5%)

Query: 279 IGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335
           +G  ++ T EL F         L+G+     G +     L  L +AI S+S    +L   
Sbjct: 1   MGWHASDTAELGFDQVKVPVSHLIGEEGAGFGYLMGGLQLERLTAAIQSISTADSALQYT 60

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           + Y  +R   G  L+D  V++  IA +  DIA   A  +   +             YA  
Sbjct: 61  LAYIDKREAFGKKLMDFQVLRHRIAQMVADIATTKAFVYHCCDLQQRGD-------YAVQ 113

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
              I K    ++A  ++ E ++  GG G+ E+  I+R YR+    +I+ G+   M   + 
Sbjct: 114 ECSIAKLQSSELAIKIVHECLQLFGGYGFTEDYKISRLYRDVRVGTIIGGTSEIMREIIA 173

Query: 456 N 456
            
Sbjct: 174 K 174


>gi|299532360|ref|ZP_07045752.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
 gi|298719598|gb|EFI60563.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44]
          Length = 387

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G         F          I  A L +       A L     +  ++ 
Sbjct: 39  HDFHQALAEAGWLGIAMPEEFGGAGL----GITEAALMMHTISATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
                 +  T    + W P             P+         G+TE   G +   + ++
Sbjct: 95  GLHPAVVFGTDEQRQRWLP-------------PLIAGRDKACFGVTEPNAGLNTLKLQTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         +  ++ +++  ++LA+        G   +     D   + +    
Sbjct: 142 AVRDGDVYVVHGQKVFISTAQVANKILLLARTRPVEECQGTEGLSLFYTDLDRSRIAVTE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   T +L        +   +G+       +        +  A  +V   R +
Sbjct: 202 IE-KMGRKCVDTNQLFIDGLRIPVQDRIGEEGKGFSYILHGLNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA A  YA  R V    +     ++  +A   + + AA  +  + A  +D+      EA 
Sbjct: 261 LARATQYANERVVFDRPIGQNQGVQHPLAQAWMGLEAAHLMVQKAAFLYDKGLPCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +A                 A+   GG GY +E  + R+ RES    +
Sbjct: 321 AAKYLAAEAC-------AKACETAIFTHGGMGYAKEFHVERYMRESWIPRL 364


>gi|83816200|ref|YP_444269.1| glutaryl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
 gi|83757594|gb|ABC45707.1| glutaryl-CoA dehydrogenase [Salinibacter ruber DSM 13855]
          Length = 480

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 31/317 (9%)

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                  ++ S   VAL  +    + +               PM    +     LTE   
Sbjct: 182 CTFWGVHTLLSMGSVALFGSEAQKERFLE-------------PMAAFDMIGSWALTEPDH 228

Query: 208 GTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
           G+D++  + +  ++  D        KW  ++  +D  ++ A+ E           L +  
Sbjct: 229 GSDVSQGLATTARREGDTWVLDGAKKWAGNATFADVTVVWARDEADGCIKG---FLVEQE 285

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326
             G   +++  KI  R      +E        L + N   G      +   L +   SV+
Sbjct: 286 RPGYHVEQIGGKIAKRGVENGLIELDGV---ELPEANRLPGVSHFGDVSAQLATCRASVA 342

Query: 327 GMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
                LA     +A+ Y   R   G       +++  +  +   + A      +L     
Sbjct: 343 WEAAGLATGAYEKALAYCNERTQFGKPTSSFQMVQDKLVTMLGKVTALQTFVMQLGRL-- 400

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +   A     + + K W C     V++ A   +GG+G + +  +AR + ++    
Sbjct: 401 ----EAGAGAIGNERSSLAKVWACDTMREVVSIARGIMGGNGILLDHDVARLFADAEGVY 456

Query: 442 ILLGSGNAMVLDVLNLL 458
              GS     L V   +
Sbjct: 457 SYEGSREMNALIVGRAI 473


>gi|159043607|ref|YP_001532401.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter
           shibae DFL 12]
 gi|157911367|gb|ABV92800.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL
           12]
          Length = 396

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 129/360 (35%), Gaps = 35/360 (9%)

Query: 94  WDKVEFHPAWHALLRRSI-HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W+ ++   A+ A   +++   G   ++   ++       +               A    
Sbjct: 36  WNDLDKRDAYPAAFVKALTEAGFLGALIPEAYGGSGLPLSAAGAVLETIHETGCNAAA-C 94

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              + +   V    +    + + P I + +                  G+TE   G+D  
Sbjct: 95  HAQMYTMGTVLRYGSEAQKQSYLPGIATGDLR------------LQAFGVTEPTTGSDTT 142

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG-------RVGCFLVPRLLED 264
            + ++ +K   G Y ++G K + S +  SD  ++LA+            G  +    + D
Sbjct: 143 QLKTRAEKTEKGTYLVNGQKVWTSRAMESDLMLLLARTTPADQCTKRSDGMSVFLLDMRD 202

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL  +++ + + N    + E+   N       L+G+       + D      +  A
Sbjct: 203 ALGNGLELRKI-DAMINH--NSCEVFLDNLEIPADTLIGEEGRGFRYIVDSMNAERILIA 259

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +  + +A+ YA  R V G  +     ++  IAD    + AA  +  + A  FD
Sbjct: 260 YECIGDAKFFIRKAVEYANERVVFGKPIGANQGLQFPIADAYAKMCAAELMVNKAAAIFD 319

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                +EEA  A+++A    +   ++        M+  GG  +  E  I R +RE+    
Sbjct: 320 AGGKAAEEANMAKLLAADASWAAAEV-------CMQTYGGFAFAREYGIERKWREARLYQ 372


>gi|240171971|ref|ZP_04750630.1| acyl-CoA dehydrogenase FadE10 [Mycobacterium kansasii ATCC 12478]
          Length = 654

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 135/424 (31%), Gaps = 54/424 (12%)

Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMVALMTTP 168
              G         +  +   Q    RA  +        G L+S   S+     + L  +P
Sbjct: 91  AELGCFGMKIPTEYGGLNMSQVAYNRALMMASTVHPSLGALLSAHQSIGVPEPLKLAGSP 150

Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YC 227
              + + P+  +                     LTE   G+D A + +    + DG  Y 
Sbjct: 151 EQKRKFLPRCAAG--------------ALSAFLLTEPDVGSDPARLAATATPVEDGKAYE 196

Query: 228 LSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           L G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +G R   
Sbjct: 197 LEGLKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADSPGITVERRNKFMGLRGIE 256

Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LAEAIHYA 339
                            N+     + +KI L  L++  +++  M        L  A  ++
Sbjct: 257 NGVTRLHRVRVPA---ENLIGREGDGLKIALTTLNAGRLAIPAMVTGSCKWSLKIAREWS 313

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           R R   G  +     +   IA IA    A  A+        DE ++         I A +
Sbjct: 314 RERVQWGKPVGKHEAVAGKIAFIAATTYALDAVVELSGQMADEGRNDIR------IEAAL 367

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGY-IEER---------SIARHYRESPANSILLGSGNA 449
            K W  +M   +  E ++  GG GY   E           + +  R+   N I  GS   
Sbjct: 368 AKLWSSEMTCRIADELLQIRGGRGYETAESLAARGERAAPVEQSLRDMRINRIFEGSSEI 427

Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509
           M L +            +         G   K    + + + +        A++L + + 
Sbjct: 428 MRLLIAR----------EAVDAHLTAAGDLAKPETDLRQKAAAAVGASGFYAKWLPQLVF 477

Query: 510 LASS 513
               
Sbjct: 478 GEGQ 481


>gi|271962976|ref|YP_003337172.1| acyl-CoA dehydrogenase family protein [Streptosporangium roseum DSM
           43021]
 gi|270506151|gb|ACZ84429.1| acyl-CoA dehydrogenase family protein [Streptosporangium roseum DSM
           43021]
          Length = 400

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 122/388 (31%), Gaps = 29/388 (7%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141
           P  H +    +  D     P    L   +   GL            V   A         
Sbjct: 29  PVYHGW-RLAKGHDDHTLPPVVEELKAEARSRGLWNLFLPDESGMSVLDYASLAEVTGRS 87

Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201
           +    EA +  +P   +  ++ +  +P   + W   + S E                   
Sbjct: 88  IDLAPEALNCAAPDTGNMEVLHMFGSPGQRERWLKPLLSGEIR-------------SAFA 134

Query: 202 LTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRV-GCF 256
           +TE     +D   I +         Y ++G KWF++    P  +  I++ + +       
Sbjct: 135 MTEPAVASSDATNIATSITLDGSE-YVINGRKWFITGAADPRCEIMIVMGKTDPDAPTHR 193

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNA-TVELEFSNTFGF---LLGDLNVSTGPVEDM 312
               +L      G+   R     G +      E+ F++       LL +        +  
Sbjct: 194 QQSMILVPMDTPGVEVVRHLPLFGYQEQHGHSEIVFTDVRVPASNLLAEEGDGFRIAQAR 253

Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372
                +   + ++     +L      A  R   G  L  Q V+++ IA+  L I  A  L
Sbjct: 254 LGPGRIHHCMRAIGMAERALELMCSRAANRVAFGQTLAQQGVVQQQIAESRLAIDQARLL 313

Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
           + + A   D     +  A  A       K    +MA  VI  A++  GG G  ++  +A 
Sbjct: 314 TLKAAWMID-----TVGAKAAAAEISAIKVVAPRMACEVIDRAIQVHGGMGVCDDVPLAM 368

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            Y ++ A  I  G     +  V     K
Sbjct: 369 MYAQARAMRIFDGPDEVHIRTVARRELK 396


>gi|218516093|ref|ZP_03512933.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli 8C-3]
          Length = 230

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 24/245 (9%)

Query: 229 SGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288
               W  +SP++D F++ A+ E       +   + +    GL   ++  K+  R++ T E
Sbjct: 1   GSKMWISNSPIADVFVVWAKSEAH--NNEIRGFVLEKGMKGLSAPKIGGKLSLRASITGE 58

Query: 289 LEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340
           +           LL  ++   GP         L+ A   +S   +  AE     A  Y  
Sbjct: 59  IVMDGVEVTEDALLPGVSGLKGP------FGCLNRARYGISWGVMGAAEDCWFRARQYGL 112

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400
            R   G  L    + ++ +AD+  +I      S R+    DE K        A  M  + 
Sbjct: 113 DRKQFGKPLAGMQLYQKKLADMMTEITLGLQGSLRVGRLMDEHK-------MAPEMVSLV 165

Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           K   C  A  +  +A +  GG+G   E  + RH +     +   G+ +   L +L   + 
Sbjct: 166 KRNNCGKALDIARQARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHAL-ILGRAQT 224

Query: 461 GTNLF 465
           G   F
Sbjct: 225 GLQAF 229


>gi|194291309|ref|YP_002007216.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
 gi|193225213|emb|CAQ71155.1| Putative Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 389

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 124/387 (32%), Gaps = 44/387 (11%)

Query: 77  ANYNTPQLHAYGPGGER----------WDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFE 125
           A+ +  QL+       R          W +VE   A+    ++     G   ++   ++ 
Sbjct: 3   ADQDPDQLYPEIREAVRDLCAGFDSAYWQRVEEQEAFPESFVQALTQAGWLSALIPEAYG 62

Query: 126 PVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185
              +            +             +     +    +      W P I S E   
Sbjct: 63  GSGQSLT-AASVIMEEINRSGGNSGACHGQMYVMGCLLRHGSDAQKLRWLPSIASGELR- 120

Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM 245
                         + +TE   GTD   + +   +  D         W      SD  ++
Sbjct: 121 -----------MQSMAVTEPTTGTDTTKLKTTAVRQGDKYLVNGQKVWISRVQHSDLMLL 169

Query: 246 LAQVEG----RVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF- 297
           LA+       +     +   + D       GL  + ++N + N    T EL F N     
Sbjct: 170 LARTTPLDQVKRKSDGLSVFVVDLRDAIGKGLTVKPIRN-MVNH--ETNELFFDNLEVPA 226

Query: 298 --LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355
             L+G+       + D      +  A   +      +  A +YAR R V    +     +
Sbjct: 227 DNLIGEEGKGLKYILDGLNAERILIAAECIGDGYWFVERASNYARDRIVFDRPIGQNQAV 286

Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415
           +  IA   +++ AA+ + ++ A  FD  +   +EA  A+++A    +             
Sbjct: 287 QFPIARAYVNVEAASLMRYKAARLFDAGRPCGKEANIAKLLAADASW-------EAANVC 339

Query: 416 MECIGGSGYIEERSIARHYRESPANSI 442
           ++  GG G+  E  I R +RE+    +
Sbjct: 340 LQTHGGFGFAAEYDIERKFRETRLYQV 366


>gi|328767161|gb|EGF77212.1| hypothetical protein BATDEDRAFT_17903 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 513

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 112/284 (39%), Gaps = 21/284 (7%)

Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIML 246
            P+ +    I L +TE   G+D+AAI +   K  DG         KW  +   SD F   
Sbjct: 231 GPVLRGEKRICLSITEPGAGSDVAAIKTTAVKTPDGKFYIVNGTKKWITNGAQSDYFSTA 290

Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA-TVELEFSNTFGFLLGDLNVS 305
            +     G   +  LL + + +GL  + +  K    S+A T  +   N    +    N+ 
Sbjct: 291 VRTGDGPG--GISMLLVERA-DGLETKTI--KTSYSSSAGTSYVIMENLKVPV---ENLL 342

Query: 306 TGPVEDMKILIY-LDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
               +  ++++Y  +     ++       RV + E   ++ +R V G  LIDQPV++  +
Sbjct: 343 GKEGDGFQVIMYNFNHERWVIACSILRSSRVVVEECFKWSHQRMVFGKRLIDQPVIRNKL 402

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A +  ++ A       +    ++   + +    A  +A + K  C ++A  +  +A +  
Sbjct: 403 AHMIAEVEATQNWLENITYQMNKMSYKDQANKLAGPIA-LLKLQCTRVAHNISDQACQIF 461

Query: 420 GGSGYIE---ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           GG G  +      I    R     +IL GS   M    +    +
Sbjct: 462 GGRGITKTGMGHIIESFQRTYKFAAILGGSEEIMADLGVRQAMR 505


>gi|328886522|emb|CCA59761.1| acyl-CoA dehydrogenase, short-chain specific [Streptomyces
           venezuelae ATCC 10712]
          Length = 430

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 122/390 (31%), Gaps = 39/390 (10%)

Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMV 162
            H L R     G   +   + +  +      K              G ++  S    + +
Sbjct: 57  HHELSRLIAEQGWLGATISQEYGGMGAGHLAKTIIIEELSRVSGAMGAMVQASQLGTAKI 116

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +    K W P I + E  PT             + +TE   G  +  +++   +  
Sbjct: 117 VHFGSDEQRKTWLPAIAAGECLPT-------------IAVTEPESGGHVLGMSATAVRDG 163

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
           D         +  +S + D   ++ +     G   +   L +    G      +  +G  
Sbjct: 164 DDYILNGSKVYVGNSHVGDLHGVVVRT--GPGSKGLTAFLVESDRPGFRTGPQRPSMGLH 221

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHY 338
             +  EL F N        L      +        +    +   +S+   +  L E   +
Sbjct: 222 GFSFGELIFENCRVPAANRLGDEGDGLSVAYSSSVLYGRANLTAVSLGIHQAILEETTRF 281

Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398
           A  R   G  L D P +K  +  +   +  A   ++   +  D+  S   E     + A 
Sbjct: 282 ASERIRYGKPLHDLPTVKLKLGQMQSRLMTARLAAYHAVHLLDQGLSCDAE----LMNAK 337

Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           +      + A      AME    +G   +R I R+ R++       G+ +  +L +  + 
Sbjct: 338 LVNV---ESAIDSGRNAMEIHAAAGLFTDRPIERYLRDAHHIFAPAGTSDVQLLRLAEV- 393

Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILR 488
                        L QD GS  +++  ++R
Sbjct: 394 ------------ALGQDKGSWSERLSEVVR 411


>gi|324999940|ref|ZP_08121052.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia
           sp. P1]
          Length = 393

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 128/380 (33%), Gaps = 33/380 (8%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           E  D+    P      +     G    +    +     +   ++        +       
Sbjct: 32  EACDREHRFPE--EFFQAFADAGYLGVLVPEEYGGGGGEMLDQVAVLEELAASGGALNAC 89

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
            S  +    + +L+              SRE        +    + +  G+TE   GTD 
Sbjct: 90  SSVHIPMLCIPSLLA-----------FGSREQCAEILPKVASGELFVTFGVTEPDAGTDT 138

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSP 267
             I+++     DG        W   S   D  ++LA+     EG      +   L D + 
Sbjct: 139 TRISTRATPTDDGWVINGTKVWNSGSLRGDKILLLARTSEPAEGERRGNGLTLFLTDLNR 198

Query: 268 NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324
           + +  + +  KIG  + AT E+ F +   T   ++G++      +        L  +  +
Sbjct: 199 DTVDIREIP-KIGRNAVATAEVFFHDHQVTPAEVVGEVGQGFYHLLHSLNGERLLISAEA 257

Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384
           +   R S+  A  YA  R V G  +     ++  +A   L + AA  + ++  + + E  
Sbjct: 258 IGLGRWSIEAATRYAEERVVFGRQIGKNQAVQHPLAASYLRLLAAAEVVYKAVDEYQE-- 315

Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS--- 441
              +       +A   KY   +       +AM+  GG  Y  E  I R++ ES       
Sbjct: 316 ---KGGGAVGTLANAAKYLSSEAGFGAADDAMQVFGGYSYAREYHIGRYWIESRLQRVAP 372

Query: 442 ILLGSGNAMVLDVLNLLEKG 461
           I     N MVL+ +     G
Sbjct: 373 I----NNQMVLNYIAERSLG 388


>gi|158315746|ref|YP_001508254.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158111151|gb|ABW13348.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec]
          Length = 426

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 141/369 (38%), Gaps = 35/369 (9%)

Query: 106 LLRRSIHDGLHCSIWDRSFEPVVRKQAH---KIRAARLYLMAQLEAGHLMSPSVTSASMV 162
           L R +   G+   +   +   +    A     + AA   L+  + A +  +P   +  ++
Sbjct: 73  LQRAARAAGVFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPI-AVNCAAPDDGNMHLL 131

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQK 220
           A + TP   + +               P+ +      + LTE     G+D + + +  ++
Sbjct: 132 ADVATPSQAERYL-------------HPLLRGETRSAIALTEPAPGAGSDPSMVRTTARQ 178

Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279
           + DG + + G K F++     AF + +A+ EG          L D    GL   R    +
Sbjct: 179 V-DGGWVIDGAKHFITGAEGAAFTICIARTEG-----GTTMFLVDQDNPGLAVGRRMPTL 232

Query: 280 GNRSNA--TVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334
            + S      E+ F++ F     +LGD+       +       L   +  +     +   
Sbjct: 233 -DHSAPGGHCEVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGM 291

Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394
           A  + +RR   G  + +  + +  +AD  +DIAAA AL   +A   DE   +   ++ AR
Sbjct: 292 AAEWIQRRSSFGRPISEHGMAQAHVADNEIDIAAARALVRSVARVLDE---QGVASSAAR 348

Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454
             A I K +  +    V+   ++  GG G  E+  +AR   E+    I  GS   +   +
Sbjct: 349 HGAAIAKTFVAEAVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGSSEVLRTSI 408

Query: 455 LNLLEKGTN 463
              + +   
Sbjct: 409 AKRVLRAHQ 417


>gi|254786386|ref|YP_003073815.1| acyl-CoA dehydrogenase [Teredinibacter turnerae T7901]
 gi|237684930|gb|ACR12194.1| acyl-CoA dehydrogenase [Teredinibacter turnerae T7901]
          Length = 1286

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 77/423 (18%), Positives = 147/423 (34%), Gaps = 35/423 (8%)

Query: 94   WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
             D+    P +  +       GL        +       +  +R              ++S
Sbjct: 636  IDERRCVPPYIVMD--FASQGLLGMCVPEQYAGQAMTVSDSLRVIEQLAAIDANLAAMVS 693

Query: 154  -PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
               V     +    +      + PKI              +  +   L +TE   G++  
Sbjct: 694  VHHVLGTRPILNYGSQLTKDVFLPKI-------------AEGRILGALAITEPGAGSNPH 740

Query: 213  AITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLVPRLLEDGSPNGL 270
            AI++  +    G + ++G K ++ +      I    QV+   G    +     +   +G+
Sbjct: 741  AISATARPAPQGGWLITGEKCWIGNGSWSGVINTFVQVKDEQGNPKGLTAFAIEQGRSGM 800

Query: 271  CYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327
                    +G R      + F +       +LG +       +D  +   L  A MS+ G
Sbjct: 801  WMGEEAPTMGMRGMVQNRIHFKDVHVTESDMLGRVGQGMEIAQDAMMHGRLVIAAMSLGG 860

Query: 328  MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387
            ++ +      YA+RR V+ G L +  V  + ++++   IAA  A+   L    D+     
Sbjct: 861  LKRAAQLMTRYAQRRDVASGKLFESSVSIQRLSEMHATIAAIQAMVRSLGELIDQGVEIP 920

Query: 388  EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
             E   A   +     W        + + M+ +GG GY E  ++ +  R+     I  G  
Sbjct: 921  SEIYAACKTSAPEFLW------KGVDQLMQMLGGRGYTENNAVPQLMRDLRLFRIFEGPT 974

Query: 448  NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507
             A+ + +   +  G    EQ+ S ++  L SS      +  D  S+  E   LA    E+
Sbjct: 975  EALNVFIGARVINGG---EQILSFIKNTLQSS-----DVATDVASMASEMLHLATASGER 1026

Query: 508  IAL 510
            I L
Sbjct: 1027 IGL 1029


>gi|115953189|ref|XP_781501.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115958817|ref|XP_001178850.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 794

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 118/374 (31%), Gaps = 33/374 (8%)

Query: 99  FHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS 158
             P    L  ++   GL              + A+         +   E  +  +P   +
Sbjct: 434 IPPVMEELKAKAKAAGLWNLFLPSESGLTQLEYAYMAEQMGRSPLGS-EPFNCAAPDTGN 492

Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQ 217
             ++ L  TP   + W               P+ +  +     +TE     +D   +   
Sbjct: 493 MEVLHLYGTPEQKEKWL-------------RPLLEGRIRSCYCMTEPDVASSDATNMQCT 539

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP------RLLEDGSPNGLC 271
             +  D  Y ++G KW+ S    D  + +A V GR G            ++      G  
Sbjct: 540 FTREGDE-YVINGKKWWSSGAG-DPRLGVAIVMGRTGNKESSTHKQHSMIIIPTDAPGFV 597

Query: 272 YQRLKNKIGNRSNATV--ELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAIMSVS 326
             R  +  G+        E+ F +                   +       +   +  + 
Sbjct: 598 KVRPLSVFGSVDAPHGHFEVRFDSVRVPASNIILGEGRGFEIAQGRLGPGRIHHCMRLLG 657

Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386
               SL      A  R   G  L    V++  +A+  ++I  A  L  + A+  D+  S+
Sbjct: 658 MAERSLELMCQRADERVAFGRKLNKMQVIQHQVAESRIEIDMARLLVLKAAHMHDKYGSK 717

Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
                 AR    + K    +MA  VI  A++  GG G  ++  +AR+Y  + +  +  G 
Sbjct: 718 K-----ARKEIAMIKIVVPRMACQVIDRAIQIHGGGGVSDDFPLARYYAGARSLRLADGP 772

Query: 447 GNAMVLDVLNLLEK 460
               +  V     K
Sbjct: 773 DEVHLASVAKQELK 786


>gi|317419985|emb|CBN82021.1| Acyl-CoA dehydrogenase family member 11 [Dicentrarchus labrax]
          Length = 788

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 42/382 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +RW           L  ++   GL                A+        L A  E  + 
Sbjct: 420 QRW---HTPQIIEDLKVKAREAGLWNLFLPAVSGLSQLDYAYIAEETGHCLFAP-EVFNC 475

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTD 210
            +P   +  ++ +  +    + W               P+ +  +     +TE     +D
Sbjct: 476 QAPDTGNMEVLHMFGSEEQKRKWLE-------------PLLRGEIRSCFCMTEPDVASSD 522

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQ-----VEGRVGCFLVPRLL 262
              I     +  D  Y ++G KW+ S   +P     I++ +     V  R G      +L
Sbjct: 523 ATNIECTLHRDGDN-YIINGKKWWSSGAGNPKCKVSIVMCRSSSQDVSSRHGQH--SMVL 579

Query: 263 EDGSPNGLCYQRLKNKIG----NRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKIL 315
                 G+   R     G           E+ F N    +              +     
Sbjct: 580 VPMDTPGVKLVRPLTVFGQDDAIHGGH-FEVHFENVCVPVANIILGEGQGFEIAQGRLGP 638

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + +V    ++L      A  R   G  L    V+   IA+  L I     L+  
Sbjct: 639 GRLHHCMRAVGLAELALELLCQRAASRRTFGKKLYQHEVVAHCIAECRLMIEQTRLLTLH 698

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D   SR+     AR    + K    +MA  V+  A++  GG G   +  +A+ Y 
Sbjct: 699 AARALDTLGSRA-----ARKEIAMIKVAAARMACYVVDCAIQVHGGGGVSGDFPLAQMYS 753

Query: 436 ESPANSILLGSGNAMVLDVLNL 457
            +    I  G     +  +  L
Sbjct: 754 YARTLRIADGPDEVHLSSIARL 775


>gi|296140719|ref|YP_003647962.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296028853|gb|ADG79623.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 411

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 110/358 (30%), Gaps = 50/358 (13%)

Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176
               D +           I  A                     + +A + T    + +  
Sbjct: 77  AKPADVTAGSRNGGTMESIINAIEMCWGDAGLMLAFPYQGLGNAAIAAVATDEQLERF-- 134

Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
                              V   + +TE   G+D AA+++   +  D         +  S
Sbjct: 135 -----------------GKVWASMAITEPSFGSDSAAVSATATRDGDEWVLNGTKIFVTS 177

Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296
              +D  ++ A V+   G   +   +      G+   RL++K+G +++ T E+ F +   
Sbjct: 178 GSRADHIVVWATVDKSAGRAAIKSFVVPREHPGVTVARLEHKLGIKASDTAEIRFEDCRI 237

Query: 297 FLLG-----DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAE----------AIHYA 339
                    ++NV  G    M+         A M++   R SL E          AI Y 
Sbjct: 238 PFENILGSPEVNVEKGFAGVMQTFDNTRPLVAAMAIGVARASLEELRTVLEDAGIAIDY- 296

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
                    +   P        +  D  AA  L+ +     D     S  A+ A+  A  
Sbjct: 297 ------DAPVNTLPHAAAEFIRLESDWEAAYQLTLKSGWMADNKIPNSMNASMAKAKAG- 349

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457
                 ++   V  +A+E  G  GY E   + +  R+S    I  G+     L +   
Sbjct: 350 ------RVGSDVTLKAVELAGALGYSERTLLEKWARDSKILDIFEGTQQIQQLIIARR 401


>gi|296169207|ref|ZP_06850860.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896105|gb|EFG75772.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 469

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 122/346 (35%), Gaps = 30/346 (8%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L+ ++   G+        FE +   ++          +A  + G  +          AL
Sbjct: 145 DLIAKAAELGITAINIPEDFEGIAAHRSSVTNVLVAEALAYGDMGLALPILAPGGVASAL 204

Query: 165 --MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
               +      + P+ F+ E  P              + + E +   D   + +   +  
Sbjct: 205 THWGSADQQATYLPE-FAGENVPQ-----------ACVAIAEPQPLFDPTRLATTAVRTP 252

Query: 223 DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282
            G           ++  ++ F++ AQ+EG+   F+V     + S  GL   +    +G R
Sbjct: 253 SGYRLDGVKSLVPAAADAELFVVGAQLEGKPALFIV-----ESSTKGLTV-KPDPSMGVR 306

Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVE---DMKILIYLDSAIMSVSGMRVSLAEAIHYA 339
           + A   +E S     L   L       +   +   L  L  A ++V      L   + Y 
Sbjct: 307 AAALGHVELSGVTVPLSARLGEDEATDQDYSEAIALSRLGWAALAVGTSHAVLDYVVPYV 366

Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399
           + R   G  +  +  +    A+IA+++     +++R A   ++      EAA A+ +   
Sbjct: 367 KEREAFGEPIAHRQAVAFMCANIAIELDGLRLITWRGAARAEQGLPFVREAALAKRL--- 423

Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445
                      +  + ++ +GG G+ +E  + R YR+  A  +  G
Sbjct: 424 ----GADKGMQIGLDGVQLLGGHGFTKEHPVERWYRDLRAIGVAEG 465


>gi|218662244|ref|ZP_03518174.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium etli
           IE4771]
          Length = 382

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 132/411 (32%), Gaps = 50/411 (12%)

Query: 61  LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120
           LGE          AR A  +   L          D+    P    L  +    GLH    
Sbjct: 6   LGETA-DAIRDTTARFAADHIAPL------AAEIDESNTFP--RQLWPQMGALGLHGITV 56

Query: 121 DRSFEPVVRKQ-AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIF 179
           +  F         H +    +   +        + S    + V    +P   +   PK+ 
Sbjct: 57  EEEFGGAGLGYLEHVVAMEEVSRASASVGLSYGAHSNLCVNQVRRWASPEQKQRHLPKLI 116

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E+                L ++E   G+D+ ++  + ++   G    S     L    
Sbjct: 117 SGEH-------------VGSLAMSEAGAGSDVVSMRLRAERK--GAPLHSERHQILDHQC 161

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR---------LKNKIGNRSNATVELE 290
           +      A    R  C    R   +        +R             +   +     L 
Sbjct: 162 A------ACRRPRRLCQDRSRRRSERHFRFSSSRRACPASASPRSSPSLACAAAIRPSLV 215

Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGG 347
           F +        +      V+ +   +  + A+++   +  M+  L   + Y R R   G 
Sbjct: 216 FEDCEVPAEALMGREGEGVKILMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGR 275

Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407
            + D  +M+  IAD+ + + ++ A  + +A + D  ++        R  A     +  + 
Sbjct: 276 PIGDFQLMQAKIADMYVALNSSRAYVYSVARACDAGRAT-------RTDAAAAILFASEN 328

Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           A  V  EA++ +GG+GY +E  + R  R++    I  G+       +   L
Sbjct: 329 AVKVSLEAIQALGGAGYTKEWPVERFLRDAKLYDIGAGTNEIRRYLIGREL 379


>gi|172037990|ref|YP_001804491.1| AMP-dependent synthetase and ligase, acyl-CoA synthase [Cyanothece
           sp. ATCC 51142]
 gi|171699444|gb|ACB52425.1| AMP-dependent synthetase and ligase, probable acyl-CoA synthase
           [Cyanothece sp. ATCC 51142]
          Length = 1275

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 118/364 (32%), Gaps = 25/364 (6%)

Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAAR-LYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
            GL        +  +       ++    L  +    +  +   ++     +    +  + 
Sbjct: 641 QGLLGMQVPPEYGGLGLNHGETMKVIEQLGAIDTTLSLFVGLNNILGIRPLLQFGSQALK 700

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
           ++  P + +                     LTE   G++  AITS    +S   + L+G 
Sbjct: 701 EELLPMLATG-------------RELAAFALTEPSAGSNPQAITSSAMPLSSDKWVLNGT 747

Query: 232 KWFL-SSPMSDAFIMLAQVEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           K +  S+  +    +  Q +   G F  +          GL        +G R      +
Sbjct: 748 KIWSGSAAWAGVINVFVQQKDAQGKFQGISSFAVRRGTPGLKQGPEALTLGMRGMVQNTV 807

Query: 290 EFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
             +N        LGD        +D  +   L  A  SV GM+        Y+ RR +S 
Sbjct: 808 YLNNVPVSASQQLGDPGEGMKVAQDAMMYGRLAIAAASVGGMKRCAQLWHRYSSRRQIST 867

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
           G L+D P++   +  +   I     L   +A   D+ +    EA     MA    YW   
Sbjct: 868 GRLLDNPLVLARLNGLTAAITTVETLVTSIAQLLDQGQEVPIEAYTVCKMAAPEFYW--- 924

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466
                    ++ +GG GYIE     +  R++    I  G    +   + + L       +
Sbjct: 925 ---QAADNLVQFLGGRGYIETNIAPQILRDARVLRIFEGPTETLTAFLGSRLIYQPKGLK 981

Query: 467 QLFS 470
           +L  
Sbjct: 982 RLLR 985


>gi|304309874|ref|YP_003809472.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301795607|emb|CBL43806.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 400

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 129/377 (34%), Gaps = 41/377 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPV---VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161
            L R +   GL       +   +   V+  A     A       L              +
Sbjct: 47  ELRRLAKAQGLWAFQMPHTLGGLEVGVQGMAALYEEAARSPFGPLAFHCAAPDDGNMILL 106

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK--RGGTDIAAITSQGQ 219
             ++ T    + W   + + E             V     +TE     G+D +   ++ +
Sbjct: 107 NKILKTDAEKQRWLVPLINGE-------------VRSAFAMTEPEGGCGSDPSLTYTRAE 153

Query: 220 KISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278
           K  D ++ ++G KWF++    +  FI++A+        L    L D    G   +R    
Sbjct: 154 KHGD-VWRINGRKWFITGAEGAQTFILIARTSNEDRRQL-TAFLFDAQQPGWRIERRIPI 211

Query: 279 IGN--RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMS-----VSGMRV 330
           +G         EL F N     + D N      + +K+  I L +A ++     +   + 
Sbjct: 212 MGPEEHGGH-CELVFEN---LEIPDQNRLLNVGDGLKVTQIRLGTARLTHCMRWLGLAKR 267

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
            +  A  Y R R   G  L     ++  + D+A +I     L+   A   D+     +E 
Sbjct: 268 CMEIAAEYTRERMSFGIPLAQHEGVQWMLGDVAKNIHTGRLLTMHAAWKLDQGDFARKEI 327

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           + A+I    T +     A       ++  G  GY  +  +   YR +    ++ G+    
Sbjct: 328 SMAKIHVADTLHQAADTA-------IQLCGAKGYSRDTLLEWIYRYARQARLVDGASEIH 380

Query: 451 VLDVLNL-LEKGTNLFE 466
            + +    LE+G + F 
Sbjct: 381 KMVLSRAYLEEGADFFR 397


>gi|298245464|ref|ZP_06969270.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
 gi|297552945|gb|EFH86810.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
           44963]
          Length = 403

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 126/377 (33%), Gaps = 33/377 (8%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAGHLM 152
           D          L  R+  +GL       +              A +   +    E  +  
Sbjct: 40  DPHHHAEIVDELKERAKAEGLWNLFLPDTEYGAGLTNLEYAPLAEIMGRVTWASEVFNCA 99

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDI 211
           +P   +  ++A   T    + W   +   E                   +TE     +D 
Sbjct: 100 APDTGNMEILAQFGTEVQRQRWLRPLLDGEIR-------------SAFAMTEPDVASSDA 146

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQVEGR--VGCFLVPRLLEDGS 266
             I     +  D  Y L+G KW++S    +    FI++ + + +          +L    
Sbjct: 147 TNIQLTIMRDGDD-YVLNGRKWWISGAARERCKIFIVMGKTDPQNPARHKQQSMILVPRD 205

Query: 267 PNGLCYQRLKNKIGNRSNAT-VELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAI 322
             GL   R    +G   N +  EL F N       LLG+        +       +   +
Sbjct: 206 TPGLTVVRNLPVMGYIDNESHCELRFENVRVPASNLLGEEGSGFAIAQARLGPGRIHHCM 265

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD- 381
            S+   + +L      A +R   G  L++Q V++  IA   L+I  A  L+ + A   D 
Sbjct: 266 RSIGTAQYALELLCQRATQRVAFGKPLVEQGVIQEWIAQSQLEIEQARLLTLKAAWLIDT 325

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
           + K  +++A        + K    ++   V++ AM+  G +G  ++  +A  +       
Sbjct: 326 QGKKAAKDA------IAMIKIVAPEVHTNVVSRAMQVFGAAGLSDDFPLASFWAHGRTLH 379

Query: 442 ILLGSGNAMVLDVLNLL 458
           I+ G        + + +
Sbjct: 380 IVDGPDEVHKRTLAHSI 396


>gi|167648700|ref|YP_001686363.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp.
           K31]
 gi|167351130|gb|ABZ73865.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31]
          Length = 430

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/457 (14%), Positives = 135/457 (29%), Gaps = 50/457 (10%)

Query: 37  YSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK 96
           ++    L A +A   + +  E+  L               A ++  +   +     R D 
Sbjct: 3   FNLPPELTAYLATLDAFIAAEIAPL--------------QAEHDNERFFDHRREWARTDW 48

Query: 97  ---VEFHPAWHALLRRSI----HDGLHCSIWDRSFEPVVRKQAHKI------RAARLYLM 143
                    W  LL ++       G +     +++                  A  L L 
Sbjct: 49  DGGGLPRRDWEDLLAKARGVADAAGHYRFALPKAYGGQDGSNLWMAVIREHLAAKGLGLF 108

Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203
             L+  H +  +     M+     P   +   P +  R             +     GLT
Sbjct: 109 NDLQNEHSIVGNNPFVLMIRDFGRPDQ-QHLIPDMLDRH------------AFRPTFGLT 155

Query: 204 EKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVG-CFLV 258
           E   G+D   + ++  +        + + G K + +   +     + A+  G  G    +
Sbjct: 156 EPNHGSDATFMETRAVREDHNGVAGWRIDGEKMWTTGMHAATHCALFARTSGEDGSAKGI 215

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKIL 315
              L      G+  +       N       + F+  +     + G  +      +     
Sbjct: 216 TCFLVPAHAPGVKIEEYLWTF-NMPTDHPRVSFTKVWVPEDAMFGPEDGGLALAQHFVHE 274

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A  S+      + E+I YAR R   G  L +   ++  I +++        L  +
Sbjct: 275 NRIRQAASSLGAATFCIEESIKYARTRKPFGKALAENQAIQFPIVELSTQAEMLRLLIRK 334

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D+  ++ E          +  YW  ++       AM+  GG GY   +     YR
Sbjct: 335 TAWEMDQ-MTKPEVEKRLSDKVSMCNYWANRLVCEAADRAMQIHGGLGYSRHKPFEHIYR 393

Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472
                 I  GS    +  V   L       +  F+ +
Sbjct: 394 HHRRYRITEGSEEIQMRKVAAWLFGYMGPRKAAFAAI 430


>gi|107100337|ref|ZP_01364255.1| hypothetical protein PaerPA_01001362 [Pseudomonas aeruginosa PACS2]
          Length = 386

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+    P   A ++     G   ++    +       A +       +         
Sbjct: 28  RRIDEQHGFPE--AFVKALTDAGWLSAMIPEEYGGSGLGLA-EASVILEEVNRCGGNSGT 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   + +   +    +    + + PK+ S E                 +G+TE   GTD 
Sbjct: 85  VHGQMYNMFTLLRNGSEAQKRFYLPKLASGELR------------LQSMGVTEPTTGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   +  D         W      SD  I+LA+       +     +   L D   
Sbjct: 133 TKIKTTAVRKGDRYVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEGMSIFLVDLRE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 193 AIGKGLTVQPIAN-MVNH--ETNELFFDNLEIPADSLIGEEGKGFRYILDGLNAERTLIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +D
Sbjct: 250 AECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACQEYD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +    A  A+ +A    +             ++  GG G+  E  + R +RE+    
Sbjct: 310 AGLNAGASANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETRLYQ 362

Query: 442 I-LLGSGNAMVLDVLNLLE 459
           +  + +   +     +LLE
Sbjct: 363 VAPISTNLILSYVAEHLLE 381


>gi|225556879|gb|EEH05166.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR]
          Length = 383

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 112/336 (33%), Gaps = 23/336 (6%)

Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174
           L    W     P     +    +    +M  +          +S  M      P V    
Sbjct: 34  LAKDGWRGICMPTKYGGSRLGISEAAVMMQIISESGAGMAGASSVPMNIFGLEPVV---- 89

Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234
             K  + E       P+ +       G+TE   G D   + S   +  +  Y L G K +
Sbjct: 90  --KFGNAEQKRRFLIPLVQGRERACFGVTEPNTGLDTLKLRSMATRNGEH-YILKGSKIW 146

Query: 235 LSSPMSD-AFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289
           +S+       ++L +             +     D   + +    +  K+G  +  +  L
Sbjct: 147 ISAAQHAERILILVRTTPLDKVTKPSQGLSLFYTDLDRSQVDVSEIP-KMGRAAVDSNTL 205

Query: 290 EFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F N       ++G+ N     +        +  A  ++     +L  A  YA  R V G
Sbjct: 206 FFENWNVPAADMIGEENNGFKMIIHDMNAERILIAAEALGLGYAALRRAAKYANERQVFG 265

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  +AD  +++ AA  + ++ A  +D   +  E A   + +A    +  C+
Sbjct: 266 RPIGQSQGIQHPLADSWMNLEAARLMVYQAARMYDAGYTSGEYANATKYLAAEAAFRACE 325

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A       +   GG GY  E  + R+ RE+    I
Sbjct: 326 RA-------VMSHGGMGYAGEYHVERYLREAFIPRI 354


>gi|226327336|ref|ZP_03802854.1| hypothetical protein PROPEN_01204 [Proteus penneri ATCC 35198]
 gi|225204554|gb|EEG86908.1| hypothetical protein PROPEN_01204 [Proteus penneri ATCC 35198]
          Length = 178

 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 279 IGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEA 335
           +G   + T  + FS+    +   L     G    M+ L    L  + +++   + +L   
Sbjct: 1   MGMNGSETCSVSFSDCVVPVSARLGAEGKGFSIAMETLDGGRLSCSAIALGIAQSALDAT 60

Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395
           I Y + R   G  +     ++  + D+A  +  A  L +R A +       + E+A A  
Sbjct: 61  IDYTKERIQFGKPIAANQGVQWMLVDMATRVDCARMLVYRAAAAKIAGLPYTRESAQA-- 118

Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
                K +  + A  V  +A++  GG GY +   + R  RE+    I  G+     + + 
Sbjct: 119 -----KLYASETATYVTQKAVQLHGGMGYTKSYPVERLMREAKLTEIFEGTSEVQRMVIA 173

Query: 456 NLL 458
             +
Sbjct: 174 KHI 176


>gi|163840586|ref|YP_001624991.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
 gi|162954062|gb|ABY23577.1| glutaryl-CoA dehydrogenase [Renibacterium salmoninarum ATCC 33209]
          Length = 429

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 124/368 (33%), Gaps = 34/368 (9%)

Query: 94  WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153
           W++ EF      LL      GL     D S +        ++  A + L A +   + + 
Sbjct: 86  WNREEFP---FDLLAELAEHGLGELQLDGSSQLFKGLMYFEVARADVSLSALVGIHNELI 142

Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213
                  M+  + +    + W P +             +         LTE   G+DIA 
Sbjct: 143 VG-----MIDRLGSEAQRERWLPGL-------------RNFRELGAFALTEPDHGSDIAG 184

Query: 214 -ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272
            + +  + +          +W  S  ++D  ++ A+             + +    G   
Sbjct: 185 GLETTAELLDGEWVINGAKRWIGSGTIADFALVWARDVADQQIKG---FIVETDRPGYQA 241

Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRV 330
            ++++K+G R      +   N        L  +T      ++L          +      
Sbjct: 242 SKIEHKMGLRIMQNAHIVLDNVRIPEANLLPEATNFAAANELLRDSRAWVGWQAAGIQFG 301

Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390
           +      YA  R   G  L    +++ ++++I  +  ++ AL  + A   +E  ++  +A
Sbjct: 302 AFDIGRDYALARIQFGRPLAKFQLIQLSLSEILGNATSSLALMLQFARMQEEGSAQMPQA 361

Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450
           A  +           +++   +A+    +GG+G   +  +A+ + ++       G+    
Sbjct: 362 AMVKATT-------TRLSRESVAKGRALLGGNGVTSDYEMAKLFGDAEILYSYEGTYEIN 414

Query: 451 VLDVLNLL 458
            L V   +
Sbjct: 415 SLIVGRAV 422


>gi|32967985|gb|AAP92500.1| 2,3-diaminopropionate alpha,beta-desaturase [Streptomyces vinaceus]
          Length = 390

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 136/379 (35%), Gaps = 35/379 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY--LMAQLEAG 149
           E W+K    P  H L R    +GL           +     +    AR    L A   A 
Sbjct: 27  EDWEKAGEMPT-HELYRSLGEEGLLGLTLPVDDGGLGLDLGYSHVWARELGRLPAGSPAM 85

Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209
            L   +     ++A      V   +       E             +   L  TE  GG+
Sbjct: 86  SLSVQTDIVLPLLAEEGGTGVRDAYLRSAVRGE-------------LVAALAATEPGGGS 132

Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------EGRVGCFLVPR 260
           D+AA+ +   + +DG+       +  +  ++D  ++L  +             G   +  
Sbjct: 133 DLAAVRTTAVRDADGLRLNGDKAFLTNGSVADFAVVLCHLLPSGADEGGNPPDGLDSLTL 192

Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLD 319
           +L      G+  +R   K+GNR+     L F++        L       E + ++     
Sbjct: 193 VLVPTGLPGVRQERHTGKLGNRACDHGRLSFTDVRVPEENLLGKPGSGYEALTRVFTRER 252

Query: 320 SAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
           + + +V   R +  L  A  YAR R V G  L+    +   +A++  ++A     +    
Sbjct: 253 TFLAAVCTARAATMLDRATTYARGRAVLGRPLLQHQAIAFRLAELDAELALIEQYT---- 308

Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
              D    R +E A A   A I K    ++        ++  GG+GY+E   + R YR++
Sbjct: 309 ---DAVFQRLQEDAAALRQASIAKLRASRLERECADLLLQLHGGAGYLEGGPVERGYRDA 365

Query: 438 PANSILLGSGNAMVLDVLN 456
            A ++  G+  A++  +  
Sbjct: 366 RAYALAGGADEALLHLIAG 384


>gi|221069538|ref|ZP_03545643.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220714561|gb|EED69929.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 388

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 125/366 (34%), Gaps = 37/366 (10%)

Query: 88  GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147
                + D+   +P   A +    + G   ++  + +         +       +     
Sbjct: 26  DEYFRKIDEQRVYPE--AFVNALTNAGWLAALIPQEYGGSGLGLT-EASVIMEEINRCGG 82

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
                   + +   +    +    + + P+I S E+                +G+TE   
Sbjct: 83  NSGACHGQMYNMGTLLRHGSQAQKEKYLPRIASGEWR------------LQSMGVTEPTT 130

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCFLVPRLL 262
           GTD   I +   K  DG Y ++G K ++S    SD  I+LA+       +     +   +
Sbjct: 131 GTDTTKIKTSAVKK-DGRYVINGQKVWISRIQHSDFMILLARTTPLAEVKKKSEGMSIFM 189

Query: 263 ED---GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316
            D       G+  + + N + N    T EL F +       L+G+       + D     
Sbjct: 190 VDLREAERKGMTVRPILN-MVNH--ETNELFFEDLEIPEENLIGEEGKGFKYILDGLNAE 246

Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376
               A   +      L    +Y + R V G  +     ++  IAD  +++ AA  + ++ 
Sbjct: 247 RTLIAAECIGDGYWFLDRVTNYVKDRQVFGRPIGQNQGVQFPIADAFIEVEAANLMRWKA 306

Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436
              FD  +S   +A  A+ +A    +             ++  GG G+  E  + R +RE
Sbjct: 307 CELFDARESMGAQANMAKYLAAKASW-------EAANACIQFHGGFGFACEYDVERKFRE 359

Query: 437 SPANSI 442
           +    +
Sbjct: 360 TRLYQV 365


>gi|134099675|ref|YP_001105336.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005421|ref|ZP_06563394.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912298|emb|CAM02411.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 379

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/284 (19%), Positives = 95/284 (33%), Gaps = 12/284 (4%)

Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239
           S E        +          LTE   G+D AA+    +   DG        W  ++P 
Sbjct: 105 SDEQVRRWIPAVAAGDAVAAFALTEPEAGSDAAALELAAEPDGDGWRLSGEKVWISNAPE 164

Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--- 296
           +D + + A+     G   V   +      GL  + L+       +    L F        
Sbjct: 165 ADFYTVFARTTAAAGARGVSAFVVPADRAGLSGEHLEM---LSEHPIGRLTFDGVAVRRD 221

Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356
            LLG+ +           L        +V   + +L  A+ +A  R   GG L D   + 
Sbjct: 222 ELLGEPDRGFRVAMRTLDLFRPSVGAFAVGMAQAALDAAVEHAGSRQAFGGPLRDLQSVS 281

Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
             +A++A+   AA  L    A ++D  + R          A + K    + A  V+  A+
Sbjct: 282 HTLAEMAMRTEAARLLVHSAAAAYDAGEQR------LAGRAAMAKLLATETAQYVVDAAV 335

Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460
           +  G     +   +   YRE  A  I  G+       +   L +
Sbjct: 336 QIHGARALRKGSLLEHLYREVRAPRIYEGASEVQRTIIARELYR 379


>gi|322710500|gb|EFZ02074.1| hypothetical protein MAA_01656 [Metarhizium anisopliae ARSEF 23]
          Length = 1069

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 147/435 (33%), Gaps = 42/435 (9%)

Query: 33  GMNAY---SSDSLLVALIANFPSVVHKELELLG-EYVLSCTA---QELARMANYNTPQLH 85
           G NAY   +    L   ++ + +  H++L+ +  EYV +       E  R        + 
Sbjct: 2   GSNAYLPFTEPLWLSRQVSPYYTKSHRQLQKIAREYVDTHILPFSDEWERQGFVPPEVIA 61

Query: 86  AYGPGGERWDKVEFHPAWHA-LLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144
            +   G     V   P     L  + +  G+    WD   + +V  +  +     +    
Sbjct: 62  EHSRQGYMATSV--FPLAKEYLNGQQLPGGIRPEDWDGFHDLIVIDEVARCGYLGV---- 115

Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204
                 L   +   A  +         + + P I                S+   L +TE
Sbjct: 116 ---IWALACGNSIGAPPLVHFGNAEQKQRFLPAIL-------------NGSIRFCLAVTE 159

Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264
              G+D+A IT+  ++  D        KW +++ +   +   A   G  G   V  L+  
Sbjct: 160 PDAGSDVAGITTTAERRGDKYIVNGAKKW-ITNGIFADYCTAAVRTGGPGKGGVSALIIP 218

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSA 321
               G+  ++L+N  G  ++ +  +EF        +LLG  N     +        L  A
Sbjct: 219 LKVPGVTCRKLENS-GVSASGSTYIEFDQVEVPASYLLGRENQGFEIIMSNFNHERLWLA 277

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             S+   R  + +A  + + R   G  L+   V++   +     + +ATA   +L    +
Sbjct: 278 CTSLRLARCCIEDAYKHGQVRETFGKPLLANQVIRAKFSASGRKVDSATAWMEQLV-YME 336

Query: 382 EAKSRSEEAAYARIMA---PITKYWCCKMAPAVIAEAMECI---GGSGYIEERSIARHYR 435
           +  SR ++      M       K  C +    V  E  + +   G S       + +  R
Sbjct: 337 QVASRGQDGGRDLYMGGLFANLKVLCGQTLEFVNREMQQVMGGLGYSRGGRGGRVEQISR 396

Query: 436 ESPANSILLGSGNAM 450
           +     +  GS   +
Sbjct: 397 DVRVMIVGGGSEEIL 411


>gi|226365863|ref|YP_002783646.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226244353|dbj|BAH54701.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
          Length = 401

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 103/276 (37%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+T+      D  Y L+G K F+++   S   ++ A V+  
Sbjct: 125 GKVWASMAITEPGFGSDSAAVTTTAVLDGDE-YVLNGEKIFVTAGERSTHIVVWATVDKT 183

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG-----DLNVSTG 307
            G   +   +      GL   RL++K+G +++ T  L   +            ++NV  G
Sbjct: 184 KGRAAIKSFVVPRDAPGLSVARLEHKLGVKASDTAVLLLQDCRIPKDNLLGTPEVNVEKG 243

Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADI 362
               M+         A M+V   R +L E         V         +Q         +
Sbjct: 244 FAGVMQTFDNTRPIVAGMAVGLGRAALEELRAILSDAGVEISYDTPAYNQHAAAAEFLQL 303

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  AA  L+ R     D  K  S EA+ ++  A        +   A+  +A+E  G  
Sbjct: 304 EADWEAAYLLALRATWMADNKKPNSLEASMSKAKAG-------RTGTAISLKAVELAGTL 356

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
           GY E   + +  R+S    I  G+     L V   L
Sbjct: 357 GYSERPLLEKWARDSKILDIFEGTQQIQQLIVARRL 392


>gi|301616695|ref|XP_002937784.1| PREDICTED: acyl-CoA dehydrogenase family member 11-like isoform 2
           [Xenopus (Silurana) tropicalis]
          Length = 789

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 109/375 (29%), Gaps = 43/375 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L   +  +GL                A           A  E  +  +P   +  ++ +
Sbjct: 423 KLKEMAKAEGLWNLFLPAISSLSQTDYAFIAEETGKCFFAP-EVFNCQAPDSGNMEVLHM 481

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISD 223
             T    K W   + S +                   +TE     +D   +    Q+  D
Sbjct: 482 YGTEEQKKKWLEPLLSGQIQ-------------SCFCMTEPDVASSDATNMECSIQRDGD 528

Query: 224 GIYCLSGHKWFLSSPM---SDAFIMLAQVEGRVGCFLV-----------PRLLEDGSPNG 269
             Y ++G KW+ S          I++ + +  +   +              ++      G
Sbjct: 529 -SYVINGKKWWSSGAGNQSCQVAIVMGKTKNTLASNIKLITMYGRYKQHSMIIVPMETKG 587

Query: 270 LCYQRLKNKIG----NRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKILIYLDSAI 322
           +   R     G           E+ F N    +              +       +   +
Sbjct: 588 VEVVRALKVFGYEDTQHGGH-FEVHFKNVRVPVSNLILGEGRGFEIAQGRLGPGRIHHCM 646

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +L      + +R   G  L    V+   IA+  + I  A  L+   A + D 
Sbjct: 647 RTIGAAESALQLMCERSAQRQTFGKKLYQHEVVLHWIAESRIAIEQARLLTLSAARAID- 705

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
               +  +A A+    + K    +MA  V   A++  GG+G  ++  +A  Y       I
Sbjct: 706 ----TVGSARAKKQIAMIKVVAPRMACKVADRAIQVFGGAGVSQDFPLASMYAAIRTLRI 761

Query: 443 LLGSGNAMVLDVLNL 457
             G     +  +  L
Sbjct: 762 ADGPDEVHLSAIAKL 776


>gi|224477890|ref|YP_002635496.1| putative glutaryl-CoA dehydrogenase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422497|emb|CAL29311.1| putative glutaryl-CoA dehydrogenase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 402

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 105/297 (35%), Gaps = 27/297 (9%)

Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDG 224
            +      + PK+ S E             +     LTE   G+D+A  + +  +K  D 
Sbjct: 122 GSKEQVAKYVPKLQSHE-------------LRTCFALTEPDHGSDVAGGLETIAEKKGDK 168

Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
                  KW   + ++D   + A V    G  +    +     +G+    L++KI  R  
Sbjct: 169 WVINGSKKWIGGANVADVIPVFA-VNKETGKPV--CFVVRPEQDGVDIDVLQDKIALRIV 225

Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRR 342
               +   +        L       +  KIL       A M+  GM  +L   + Y ++R
Sbjct: 226 PNALITLKDVEVSEEDRLQNINSFKDIAKILYSTRAGVAYMATGGMAGTLRATLDYVKQR 285

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
              G  L +  +++  +A I  ++A A +    LA   +  +      + A++M  +   
Sbjct: 286 KQFGKPLSNYQLVQEKLAMIQGNLAQAMSTCAALARMQEHGEYDEVATSAAKMMNALRFR 345

Query: 403 WCCKMAPAVIAEAMECIGGSGYIE-ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               M   +        GG+G +  E  IAR + ++ A     G+     L +   L
Sbjct: 346 ESAAMGRGIT-------GGNGILAGEYDIARFFSDAEAVYTYEGTHEINALVIGRAL 395


>gi|221066502|ref|ZP_03542607.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
 gi|220711525|gb|EED66893.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1]
          Length = 387

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 37/351 (10%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM------AQLEAGHLMSPSVT 157
           H   +     G         F          I  A L +       A L     +  ++ 
Sbjct: 39  HDFHQALAEAGWLGIAMPEEFGGAGL----GITEAALMMHTISATGAGLSGASAVHMNIF 94

Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217
                 +  T    + W P             P+         G+TE   G +   + ++
Sbjct: 95  GLHPAVVFGTDEQRQRWLP-------------PLIAGRDKACFGVTEPNAGLNTLKLQTR 141

Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQR 274
             +  D         +  ++ +++  ++LA+        G   +     D   + +    
Sbjct: 142 AVREGDVYVVHGQKVFISTAQVANKILLLARTRPVEECKGTEGLSLFYTDLDRSRIAVTE 201

Query: 275 LKNKIGNRSNATVELEFSNTFGFL---LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331
           ++ K+G +   T +L        +   +G+       +        +  A  +V   R +
Sbjct: 202 IE-KMGRKCVDTNQLFIDGLRIPVEDRIGEEGKGFSYILHGLNPERILIAAEAVGLGRAA 260

Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391
           LA A  YA  R V    +     ++  +A   + + AA  +  + A  +D+      EA 
Sbjct: 261 LARATQYANERVVFDRPIGQNQGVQHPLAQAWMGLEAAHLMVQKAAFLYDKGLPCGAEAN 320

Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
            A+ +A                 A+   GG GY +E  + R+ RES    +
Sbjct: 321 AAKYLAAEAC-------AKACEAAIFTHGGMGYAKEFHVERYMRESWIPRL 364


>gi|197246361|gb|AAI68650.1| RGD1310159 protein [Rattus norvegicus]
          Length = 1069

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/411 (18%), Positives = 140/411 (34%), Gaps = 57/411 (13%)

Query: 83   QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA--------HK 134
            +L  +    +RW      P    L  ++  +GL         +P  +  A        H 
Sbjct: 684  ELQRHQASADRWSP---SPLIEDLKEKAQAEGLWNLFLPLETDPERKYGAGLTNVEYAHL 740

Query: 135  IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194
                 + L A  E  +  +P   +  ++    T      W              AP+ + 
Sbjct: 741  CEVMGMSLYAS-EIFNCSAPDTGNMEILVRYGTEEQKARWL-------------APLLEG 786

Query: 195  SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEG 251
             +     +TE +  +  A+      K  DG Y ++GHKW++S    P     + + + + 
Sbjct: 787  RIRSCFAMTEPQVASSDASNIEASIKEEDGSYVINGHKWWISGILDPRCKLCVFMGKTDP 846

Query: 252  RVGCF-LVPRLLEDGSPNGLCYQR------LKNKIGNRSNATVELEFSNTFGFLLGDLNV 304
            +         LL      G+   R      L++  G       E++F +         N+
Sbjct: 847  QAPRHQQQSMLLVPMDTPGIKVIRPLSVFGLEDPPGGHG----EVQFKDVRVP---KENI 899

Query: 305  STGPVEDMKILI-YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358
              GP    +I    L    +      +     +L         R   G  L++   +   
Sbjct: 900  LLGPGRGFEIAQGRLGPGRIHHCMRLIGYSERALELMKTRVMSRTAFGKPLVEHGTILAD 959

Query: 359  IADIALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416
            IA   +DI  A  L  + A+  D A  K+ + E A  +++AP        MA  VI  A+
Sbjct: 960  IARSRVDIEQARLLVLKAAHLMDVAGNKAAALEIAMIKMVAPS-------MAYRVIDRAV 1012

Query: 417  ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467
            +  G +G   +  +A+ +  + A     G      L V  +  KG +  ++
Sbjct: 1013 QAFGAAGLSSDYPLAQFFGWARALRFADGPDEVHQLTVAKMELKGRSRLQE 1063


>gi|15596076|ref|NP_249570.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|116048803|ref|YP_792397.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893152|ref|YP_002442021.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|254239232|ref|ZP_04932555.1| hypothetical protein PACG_05423 [Pseudomonas aeruginosa C3719]
 gi|254245166|ref|ZP_04938488.1| hypothetical protein PA2G_06054 [Pseudomonas aeruginosa 2192]
 gi|296390767|ref|ZP_06880242.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1]
 gi|313105762|ref|ZP_07792025.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
 gi|9946778|gb|AAG04268.1|AE004522_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
 gi|115584024|gb|ABJ10039.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126171163|gb|EAZ56674.1| hypothetical protein PACG_05423 [Pseudomonas aeruginosa C3719]
 gi|126198544|gb|EAZ62607.1| hypothetical protein PA2G_06054 [Pseudomonas aeruginosa 2192]
 gi|218773380|emb|CAW29192.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58]
 gi|310878527|gb|EFQ37121.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016]
          Length = 386

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
            R D+    P   A ++     G   ++    +       A +       +         
Sbjct: 28  RRIDEQRGFPE--AFVKALTDAGWLSAMIPEEYGGSGLGLA-EASVILEEVNRCGGNSGT 84

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211
           +   + +   +    +    + + PK+ S E                 +G+TE   GTD 
Sbjct: 85  VHGQMYNMFTLLRNGSEAQKRFYLPKLASGELR------------LQSMGVTEPTTGTDT 132

Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLED--- 264
             I +   +  D         W      SD  I+LA+       +     +   L D   
Sbjct: 133 TKIKTTAVRKGDRYVINGQKVWISRIQHSDLMILLARTTPLAEVKRKSEGMSIFLVDLRE 192

Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
               GL  Q + N + N    T EL F N       L+G+       + D         A
Sbjct: 193 AIGKGLTVQPIAN-MVNH--ETNELFFDNLEIPADSLIGEEGKGFRYILDGLNAERTLIA 249

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   R  + +A HYAR R V G  +     ++  IA+  +++ AA  + +R    +D
Sbjct: 250 AECIGDGRWFIDKASHYARDRVVFGRPIGQNQGVQFPIAEAHIEVEAADLMRWRACQEYD 309

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
              +    A  A+ +A    +             ++  GG G+  E  + R +RE+    
Sbjct: 310 AGLNAGASANMAKYLAAKASW-------EAANACLQTHGGFGFACEYDVERKFRETRLYQ 362

Query: 442 I-LLGSGNAMVLDVLNLLE 459
           +  + +   +     +LLE
Sbjct: 363 VAPISTNLILSYVAEHLLE 381


>gi|326383879|ref|ZP_08205563.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197338|gb|EGD54528.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
          Length = 396

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 108/276 (39%), Gaps = 19/276 (6%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR 252
             V   + +TE   G+D AA+++   +  D  Y ++G K F+++   +D  ++ A ++  
Sbjct: 120 GDVWAAMAITEPGFGSDSAAVSTTAVRDGDD-YVINGEKIFVTAGSRADHVVVWATLDKT 178

Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312
           +G   +   +   +  G+   RL++K+G +S+ T  + F +        L      V+  
Sbjct: 179 IGRAAIKSFVVPMNSGGVTVARLEHKLGIKSSDTAVVRFEDVRVPSENLLGTPEIQVKTG 238

Query: 313 K--ILIYLDSAIMSVSGMRVSLAEAIHYARRRHV--------SGGILIDQPVMKRAIADI 362
              ++   D+    V+ M V L  A     RR +               Q         +
Sbjct: 239 FGGVMQTFDNTRPVVAAMAVGLGRAALEELRRMLEEAGHEIDYDRPAAAQHASVAEFIRL 298

Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422
             D  ++  L+ R A   D ++  S EA+ ++  A        +M   +  +A+E    +
Sbjct: 299 ESDWESSWMLTLRAAWMADNSEPNSAEASMSKAKAG-------RMVTDLTNKAVEIGSTA 351

Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
            + E   + +  R+S    I  G+     L +   +
Sbjct: 352 AFSETELLEKWARDSKILDIFEGTQQIQQLIIARRV 387


>gi|304394723|ref|ZP_07376626.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303293142|gb|EFL87539.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 394

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 126/360 (35%), Gaps = 35/360 (9%)

Query: 94  WDKVEFHPAW-HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152
           W K++   A+ H  +R     G   ++    +       +    A    +  +       
Sbjct: 34  WLKLDKEDAYPHDFVRTLTESGFLGALIPEEYGGSGLPLS-AAGAVLETIHERGCNAAAC 92

Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212
              + +   V    +    + + P I S +                  G+TE   G+D  
Sbjct: 93  HAQMYTMGTVLKYGSDEQKQKYLPGIASGDLR------------LQAFGVTEPTTGSDTT 140

Query: 213 AITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDGS- 266
            + ++ +K   G Y ++G K + S +  SD  ++LA+             +   L D + 
Sbjct: 141 QLKTRAEKNKAGNYVINGQKVWTSRAYESDLMLLLARTTPTDQCAKRSDGLSTFLLDMNV 200

Query: 267 --PNGLCYQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSA 321
              NGL   ++ + + N    T E+ F N       L+G+       + D      +  A
Sbjct: 201 AKDNGLSLSKI-DAMINH--NTCEVFFENLEIPADTLVGEEGKGFKYIVDSMNAERILIA 257

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
              +   +  + +A+ YA  R V G  +     ++  IA+      AA  +  + A  F+
Sbjct: 258 YECIGDAKFFIRKAVEYANERVVFGKPIGTNQGIQFPIAEAYAKAQAAELMVAKAAAVFE 317

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                + EA  A+++A    +   +         M+  GG  +  E  I R +RE+    
Sbjct: 318 GGHRAAAEANMAKMIAADASWAAAET-------CMQVYGGFAFASEYGIERKWREARLYQ 370


>gi|76802368|ref|YP_327376.1| acyl-CoA dehydrogenase 3 [Natronomonas pharaonis DSM 2160]
 gi|76558233|emb|CAI49821.1| acyl-CoA dehydrogenase 3 [Natronomonas pharaonis DSM 2160]
          Length = 388

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 119/395 (30%), Gaps = 53/395 (13%)

Query: 66  LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE 125
                 +L R +          G   E  D+ EF   +   L     DG         + 
Sbjct: 4   GESDLHDLIRESVRGIASEFDRGYWKEHIDQKEFPEEYWQAL---ADDGWLGVTIPEEYG 60

Query: 126 PVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183
                                Q     +++P V     +         +++ P+I   E 
Sbjct: 61  GEGLGMLEMCIIIEELSRSGGQGGIIFVLTP-VFGGIGIQRHGNEAQKEEYLPQIADGEM 119

Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA 242
                           + LTE   G++   I +   +  D     +G K F+S    +D 
Sbjct: 120 K-------------FCMALTEPTAGSNTLNIQTTADRDGDEFVV-NGQKTFISGVENADT 165

Query: 243 FIMLAQV---EGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATV--------EL 289
            +++ +    +       V   L D   +  G+    +          T         ++
Sbjct: 166 MLLVTRTTERDDENPTHGVTLFLVDDPAAQPGINLAEV---------DTAVPWFERQYQV 216

Query: 290 EFSNTFGFLLGDLNVSTGPVEDM---KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346
            F +        L    G +  +        L  A  S+ G   ++  A+ YA  R V G
Sbjct: 217 TFDDLRVSEDDILGTEDGGLYLLWDTLNTERLAGAASSLGGGLRAIDLAVDYASDRSVFG 276

Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406
             +     ++  IA+    + +A  + ++ A  +DE +    EA  A+++          
Sbjct: 277 QPIGAHQSIQHPIAESYAKLMSAREIMYKGAQKWDENEDCGLEANVAKLLTSQA------ 330

Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                   A++  GG+G+ +E  +   ++      
Sbjct: 331 -GTEAADRAIQAHGGNGFTDEYEVYDIWQNLRLTQ 364


>gi|169630567|ref|YP_001704216.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169242534|emb|CAM63562.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
          Length = 470

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 127/365 (34%), Gaps = 35/365 (9%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
           P     DK + +PA   LL +    G+        F+ +  +++    +     ++  + 
Sbjct: 129 PAAYESDKNKTYPA--DLLGKVAELGVTAINIPEDFDGIASQRSTVTNSLVAEALSYGDM 186

Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           G  +     S    AL    +      +  K F+ E  P              + + E +
Sbjct: 187 GLALPILAPSGVASALTNWGSADQQATYL-KEFAGENVPQ-----------ASVVIAEPQ 234

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGS 266
              D  ++ +   +   G           ++  ++ FI+ A   GR   F+V     +  
Sbjct: 235 ALFDPFSLKTTATRTPSGFRLNGTKSLVPAAAQAELFIVAANYNGRPTLFIV-----ESG 289

Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG------PVEDMKILIYLDS 320
             G+  +     +G R  A   L  +N        L    G         +   L  L  
Sbjct: 290 TEGITVEE-DPSMGIRGAALGRLNLNNVAVPAANILGEEEGSDTALANYSEAVALARLGW 348

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A ++V   +  L   I Y ++R   G  +  +  +    A+IA+++     ++ R A+  
Sbjct: 349 ASLAVGTGQAVLDYVIPYVKQREAFGEPIARRQAVAFMCANIAIELDGLRLVTLRGASRA 408

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           ++      EAA AR +A             +  + ++ +GG G+ +E  + R YR   A 
Sbjct: 409 EQGLPFVREAALARKLA-------TDKGMQIGLDGVQLLGGHGFTKEHPVERWYRNLRAI 461

Query: 441 SILLG 445
            +  G
Sbjct: 462 GVAEG 466


>gi|134099782|ref|YP_001105443.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005627|ref|ZP_06563600.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912405|emb|CAM02518.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
          Length = 385

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 128/350 (36%), Gaps = 35/350 (10%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL 164
            L R +   G                 +           A      ++       +++A 
Sbjct: 40  ELWREAGKLGYLGVNIPEEHGGGGAGISELSIVLEELSAAGCPLLMMVVSPAICGTVIAR 99

Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224
             T    + W P +                S+ +   +TE   G++   IT+  ++   G
Sbjct: 100 FGTDEQKRRWLPGL-------------ADGSLTMAFAITEPDAGSNSHRITTTARRDG-G 145

Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNR 282
            + LSG K F+S   ++DA +++ + E      L P   +      G   Q ++ ++   
Sbjct: 146 DWVLSGRKVFISGIDVADAVLVVGRTEDARTGKLKPALFVVPKDAPGFEAQHIEMEL--- 202

Query: 283 SNATVE--LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            +   +  L F +       L+G  +     +        + ++ +++   R +L +A+ 
Sbjct: 203 VSPDRQYSLFFDDVRLPGDALVGSEDAGLLQLFAGLNPERVMASALALGTARHALGKAVS 262

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           Y + R V G  +     +   +A + +++  A  ++ + A+ +D     +     A   A
Sbjct: 263 YVKERSVWGTPIGSHQGLAHPLAQVKIELELARLMAQKAAHLYDSGDDEA-----AGEAA 317

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA------RHYRESPANS 441
            + KY   ++A   + +A++ +GG+G   E  +A      R  R +P + 
Sbjct: 318 NMAKYAAGEVAVRSVDQAVQSLGGNGLTTEYGVASMLSACRLARVAPVSR 367


>gi|284993323|ref|YP_003411878.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284066569|gb|ADB77507.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 403

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 122/374 (32%), Gaps = 34/374 (9%)

Query: 95  DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154
           D  E  P    L   +   GL              + A          +   EA ++ +P
Sbjct: 41  DNHEHPPVLEELKAEARKRGLWNLFHHELGGLSNLEYASVAEITGWSPVIAPEAMNVGAP 100

Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAA 213
              +   + L  T    + W   +   E                G  +TE     +D   
Sbjct: 101 DTGNMETLMLFGTDEQKRRWLDPLLEGEIR-------------SGFAMTEPDVASSDARN 147

Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM---SDAFIMLAQVEGR-VGCFLVPRLLEDGSPNG 269
           + +   +  D  Y ++G KW+++         FI++ + +           +L      G
Sbjct: 148 VQTSIVRDGDE-YVINGRKWWITGTADERCQIFIVMGKTDPDGPPHRQQSMVLVPRDTPG 206

Query: 270 LCYQRLKNKIGNRSNA-TVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAI 322
               R     G +      EL F++         N+  G  +   I         +   +
Sbjct: 207 FEIVRHLPVFGYQDQHGHSELRFTDVRVPAS---NILAGEGDGFMIAQARLGPGRIHHCM 263

Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382
            ++     +LA  +  A+ R   G  L +Q  ++ +IA   ++I  A     + A+  D+
Sbjct: 264 RAIGMAERALALMVERAKARVAFGRPLAEQGTVRESIALSRMEIDQARLYVLQTADLIDK 323

Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442
                  A  A+      K    ++A AVI  A++  GG+G   +  +AR Y  +    I
Sbjct: 324 FG-----AKGAKTEISAIKVAAPRVALAVIDRAIQLHGGAGVSNDTVLARFYASARTLRI 378

Query: 443 LLGSGNAMVLDVLN 456
           + G     +  V  
Sbjct: 379 VDGPDAVHIRGVAK 392


>gi|146161808|ref|XP_001033489.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila]
 gi|146142823|gb|EAR85826.2| Acyl-CoA dehydrogenase, C-terminal domain containing protein
           [Tetrahymena thermophila SB210]
          Length = 411

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 110/286 (38%), Gaps = 17/286 (5%)

Query: 178 IFSREYDPTNKAPMQKT-SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236
               E       P+ +   +  G GLTE + G+D  ++ +  QK   G + L+G K ++ 
Sbjct: 125 QLGNENQRQKYVPLLRDLQLTGGWGLTENKFGSDATSLQTTVQKTEGG-WLLNGDKTWIG 183

Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295
           +   D  ++ A+ VE       +   + D    G+  + LK+K+  R     ++ F+N F
Sbjct: 184 NGNRDIMVVWARNVENNK----IQGFIVDLKAKGVRSEVLKHKLALRIVQNCQITFTNVF 239

Query: 296 GFLLGDLNVSTGPVED-MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352
                 L+ +T   +   KIL+   L    +            I Y   R   G  +   
Sbjct: 240 IPEENMLSKATDFQKGTAKILLHSRLMVCWLVAGICMGVYDNVIKYISNRKQFGVPISSF 299

Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412
            + +  +A I  +  A    + R++  +D  K    + A A       K +C + A  V 
Sbjct: 300 QLQQEKLARIMSNTQAILLFAHRISQMYDNKKITLGQVALA-------KAFCTERAREVA 352

Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
               E +GG+G I +  + + + +  A     G+ +   L     L
Sbjct: 353 RLGREMLGGNGIIFDNYVMKAFADIEALYTYEGTYDINSLVGGREL 398


>gi|11095222|gb|AAG29788.1|AF235050_11 acyl-CoA dehydrogenase [Streptomyces rishiriensis]
          Length = 373

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 118/355 (33%), Gaps = 27/355 (7%)

Query: 110 SIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE--AGHLMSPSVTSASMVALMTT 167
           +   G+                         +   +       + +  +   +++A    
Sbjct: 38  AAELGMTGLCLPTEHGGGGLGALDTALCLEAFCRWRGHRPPFGIAAHLLACGTVLADHAG 97

Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227
             V  +    + S              +V     +TE   G+D++ +T+      D  Y 
Sbjct: 98  EPVRAELLQGLASG-------------TVVAANAMTEDDAGSDLSRLTTTAVADGD-SYV 143

Query: 228 LSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286
           L+G K F+S+ P++D FI  A      G   +       +  GL    L  K+G    A 
Sbjct: 144 LNGRKSFVSNAPLADVFITYAATAPSAGYLGMSAFAVPRTLPGLQVGSLLAKMGLNGCAA 203

Query: 287 VELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343
            ++EF++      +LLG  N      +            + +  M   LA+ + +AR R 
Sbjct: 204 AQVEFTDCKVPGRYLLGPENQGNSVFQRSMTWERACLPAIYLGAMEGQLAQCVDHARSRK 263

Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403
             G  + +   +   +A + L +  +  L +R     D+ +   E AA A+         
Sbjct: 264 QFGRSIGNFQAISHRLATMKLRLETSRLLLYRACWYLDQGRPAVEAAALAKTAVAEAA-- 321

Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
                 A   +A++  G  G +    I +  + +   +I  G+       V   +
Sbjct: 322 -----VANALDAVQVFGARGCLAADGIGQQLQNAIPLNIFSGTTEMQREVVAKSM 371


>gi|295688663|ref|YP_003592356.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter
           segnis ATCC 21756]
 gi|295430566|gb|ADG09738.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC
           21756]
          Length = 388

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 124/383 (32%), Gaps = 46/383 (12%)

Query: 82  PQLHAYGPGGERWDKVEFHPAWHA-----------LLRRSIHDGLHCSIWDRSFEPVVRK 130
           P+L        R    +F PA+              +      GL   +    +      
Sbjct: 7   PELIKALRQTVRALCRDFPPAYWRGLDREKAYPTAFVAAMTQAGLLGVLIPEDYGGAGLG 66

Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190
                      + A       +   + +   V    +    + W P+I            
Sbjct: 67  LTAAAAILE-EVHASGGNAAALHAQMYTMGTVLRHGSRAQKETWLPRIADGSIR------ 119

Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249
                     G+TE   GTD  +I++  ++  D  Y ++G K + S +  SD  ++LA+ 
Sbjct: 120 ------LQAFGVTEPTAGTDTTSISTFARRDGD-TYVINGQKVWTSRAEHSDLMVLLART 172

Query: 250 EGR----VGCFLVPRLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGF---LL 299
             +         +   L D      NGL  + +   + N +  T E+ F N       L+
Sbjct: 173 TPKDQVARKADGLSVFLVDMRAAKGNGLTIKPIATML-NHA--TTEVFFDNLVIPADSLI 229

Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359
           G+       + D      +      +      + +A  YA  R V G  +     ++  I
Sbjct: 230 GEEGKGFRYILDGMNAERILIGAECLGDAAWLIGKARDYANSRVVFGRPIGQNQGVQFPI 289

Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
           A       AA    +  A  +D  +   E+A   +++A    +    M        ++  
Sbjct: 290 ARAYAQAHAARLTIYDAAARYDAGQPCGEQANIGKMLASEASWAAADM-------CLQTH 342

Query: 420 GGSGYIEERSIARHYRESPANSI 442
           GG G+ EE  I R +RE+    +
Sbjct: 343 GGFGFAEEYDIERKFRETRLYQV 365


>gi|304310457|ref|YP_003810055.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
 gi|301796190|emb|CBL44396.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1]
          Length = 445

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 129/372 (34%), Gaps = 44/372 (11%)

Query: 110 SIHDGLHC--SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT 167
           +   GL      W     P  R   H +   +     +L         + SA  + L   
Sbjct: 63  AGRAGLLSDLLPWPLGCTPWAR-YRHSLVWQQSLRTEELARADGGLMLLLSAHNLGL--- 118

Query: 168 PRVHKDWAPKIFSREYD-------PTNKAPMQKTSVAIGLGLTEKRGGTDI------AAI 214
                  AP +FS  +        P  +A  Q         +TE   G+D       A  
Sbjct: 119 -------APILFSGNWQVIKQVVLPAFRACEQGEPQLFAFAITEPGAGSDAEEGHVAAHN 171

Query: 215 T--SQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271
                      G + L G K F+S        ++LA + G          L D    G  
Sbjct: 172 KPELVAHPAPGG-WRLRGRKVFISGGDRARWVVVLAALAGEGYPSW-TAFLVDTLQPGFV 229

Query: 272 YQRLKNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
             R ++K+G R++A  ELEF + F     +LG L               L  A M+V   
Sbjct: 230 RVRNEHKMGMRASAATELEFCDCFVPDARVLGGLRNGWALSRATLNFSRLPVASMAVGFA 289

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388
           + +   A  +A R+ + G  LI    M+  IAD+    A+  AL +  A ++   +++  
Sbjct: 290 QAATDIATDHACRQMLGGRPLIHYQHMQLGIADLQAATASIRALVWEYARAWTPWQAK-- 347

Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448
                   A I K+     A  VI  AM+  G  G      + + +R++    I  G+  
Sbjct: 348 --------ASIAKFQATDQAQQVIERAMDLCGEMGLTHAMGLEKIFRDNRLTRIFEGTNQ 399

Query: 449 AMVLDVLNLLEK 460
              L V+   ++
Sbjct: 400 INRLSVIEDQQR 411


>gi|111018046|ref|YP_701018.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110817576|gb|ABG92860.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
          Length = 647

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 127/373 (34%), Gaps = 44/373 (11%)

Query: 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP--SVTSASMV 162
             +R     G         +  +   Q    RA  L        G L+S   S+     +
Sbjct: 87  EYVRGLADLGCFGLKISEEYGGLGLSQVAYNRALMLVASVHPSLGALLSAHQSIGVPEPL 146

Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222
            L  TP   +++ P+                        LTE   G+D A + S    I 
Sbjct: 147 KLAGTPEQKREFLPRC--------------ARGAISAFLLTEPDVGSDPARLASSATPIE 192

Query: 223 DGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL-VPRLLEDGSPNGLCYQRLKNKI 279
            G  Y L G K + ++ + ++  +++A+V    G    +   + +    G+  +R    +
Sbjct: 193 GGAAYELDGVKLWTTNGVVAELLVVMARVPKSEGHRGGISAFVVEADTPGITVERRNAFM 252

Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LA 333
           G R         +  +   +   N+     + +KI L  L++  +++  M        L 
Sbjct: 253 GLRGIENGV---TRMYKVRVPAENLIGREGDGLKIALTTLNAGRLAIPAMCAGAGKWSLK 309

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393
            A  ++  R   G  + +   +   ++ +A    A  A+    A   DE ++        
Sbjct: 310 IAREWSGVRVQWGKPIAEHTAVANKLSFMAATTYALEAVVDLSAQMNDEGRNDIR----- 364

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----------SIARHYRESPANSIL 443
            I A + K W  +MA  +  E ++  GG GY               + +  R+   N I 
Sbjct: 365 -IEAALAKLWSSEMACVISDELIQVRGGRGYETAASLAARGERAVPVEQLDRDLRINRIF 423

Query: 444 LGSGNAMVLDVLN 456
            GS   M L V  
Sbjct: 424 EGSSEIMRLLVAR 436


>gi|91976343|ref|YP_569002.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
 gi|91682799|gb|ABE39101.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 448

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 90/273 (32%), Gaps = 10/273 (3%)

Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFI-MLAQV 249
               I  GLTE   G+D   + ++ +   +     + ++G K + +         + A+ 
Sbjct: 169 GKYRITFGLTEPDHGSDATHMETRAEEAVRDGKKGWVINGEKMWTTGMHVATHCALFART 228

Query: 250 EGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVS 305
            G  G    +   L      G+  +       N       + F++ F     + G++   
Sbjct: 229 SGNDGDARGISCFLVPADAPGVKVEEYLWTF-NMPTDHPRVSFTDVFVTEDAVFGEIGRG 287

Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365
               +       +  A  S+      + E++ YAR R   G  L     ++  + ++A  
Sbjct: 288 LSLAQCFVHENRIRQAASSLGAATYCINESVKYARERKPFGEELARNQGIQFPLVELATQ 347

Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425
                 L  + A   D+      E   +     +  YW  ++       AM+  GG GY 
Sbjct: 348 AEMLRLLIRKTAWEMDQMTQAQVEHTLSDK-VSMCNYWANRLCCQSADRAMQVHGGMGYS 406

Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
             ++    YR      I  GS    +  V   L
Sbjct: 407 RHKAFEHIYRHHRRYRITEGSEEIQMRKVAGFL 439


>gi|317419984|emb|CBN82020.1| Acyl-CoA dehydrogenase family member 11 [Dicentrarchus labrax]
          Length = 768

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 42/382 (10%)

Query: 92  ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL 151
           +RW           L  ++   GL                A+        L A  E  + 
Sbjct: 400 QRW---HTPQIIEDLKVKAREAGLWNLFLPAVSGLSQLDYAYIAEETGHCLFAP-EVFNC 455

Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTD 210
            +P   +  ++ +  +    + W               P+ +  +     +TE     +D
Sbjct: 456 QAPDTGNMEVLHMFGSEEQKRKWLE-------------PLLRGEIRSCFCMTEPDVASSD 502

Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQ-----VEGRVGCFLVPRLL 262
              I     +  D  Y ++G KW+ S   +P     I++ +     V  R G      +L
Sbjct: 503 ATNIECTLHRDGDN-YIINGKKWWSSGAGNPKCKVSIVMCRSSSQDVSSRHGQH--SMVL 559

Query: 263 EDGSPNGLCYQRLKNKIG----NRSNATVELEFSNTFGFLLG---DLNVSTGPVEDMKIL 315
                 G+   R     G           E+ F N    +              +     
Sbjct: 560 VPMDTPGVKLVRPLTVFGQDDAIHGGH-FEVHFENVCVPVANIILGEGQGFEIAQGRLGP 618

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             L   + +V    ++L      A  R   G  L    V+   IA+  L I     L+  
Sbjct: 619 GRLHHCMRAVGLAELALELLCQRAASRRTFGKKLYQHEVVAHCIAECRLMIEQTRLLTLH 678

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A + D   SR+     AR    + K    +MA  V+  A++  GG G   +  +A+ Y 
Sbjct: 679 AARALDTLGSRA-----ARKEIAMIKVAAARMACYVVDCAIQVHGGGGVSGDFPLAQMYS 733

Query: 436 ESPANSILLGSGNAMVLDVLNL 457
            +    I  G     +  +  L
Sbjct: 734 YARTLRIADGPDEVHLSSIARL 755


>gi|55978198|ref|YP_145254.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
 gi|55773371|dbj|BAD71811.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8]
          Length = 386

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 77/425 (18%), Positives = 136/425 (32%), Gaps = 56/425 (13%)

Query: 47  IANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHAL 106
           +      + + +    E  +     E AR    N  +L A                   L
Sbjct: 5   LDRETEALRERVRAFLEEAVIPREAEAAR----NLDRLEAIAR---------------EL 45

Query: 107 LRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
              +   GL      +    +    R+ A  +  A   L+    A +  +P   +  ++ 
Sbjct: 46  QAEAKERGLFLPHMPKELGGLGLSWRQLAVVLEEAGRSLLGP-RALNAAAPDEGNMHLLH 104

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK-RGGTDIAAITSQGQKIS 222
            + +P   + +               P+    V     +TE    G D   + +  ++  
Sbjct: 105 KVASPEQKRRYLE-------------PLAAGEVRSAFAMTEPMGAGADPTLLKTTARRKG 151

Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281
            G   L G KWF +    +  F++LA+ E     FLV     D    GL   R    + +
Sbjct: 152 RGF-VLEGRKWFTTGAEGAAFFLVLARAEEGPTIFLV-----DRENPGLKLVRTIPTMDH 205

Query: 282 RSNA-TVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
            S     EL           +LG++       E       L   +  +     +   A  
Sbjct: 206 WSLGGHGELVLEGCEVGEEAVLGEVGKGFEYAELRLDPARLTHCMRWLGVGVRATELAQE 265

Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397
           YA +R   G  L +   ++  IAD  +++ AA  + +  A   D  +    EA+ A    
Sbjct: 266 YALKRESFGKKLAEHQGVQFMIADSHMELHAARLMVWHAAWKLDRGERIRHEASMA---- 321

Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-N 456
              K +  +     +  A++  G  G  E+  ++  YRE     I  G        V   
Sbjct: 322 ---KVFVSEAVNRAVDRALQITGALGVSEDIPLSIFYREVRPFRIYDGPSEVHRASVGKR 378

Query: 457 LLEKG 461
            L KG
Sbjct: 379 ALFKG 383


>gi|239943342|ref|ZP_04695279.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           15998]
 gi|239989798|ref|ZP_04710462.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL
           11379]
 gi|291446814|ref|ZP_06586204.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
 gi|291349761|gb|EFE76665.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998]
          Length = 389

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 118/362 (32%), Gaps = 29/362 (8%)

Query: 89  PGGERWDKVEFHPAWH--ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146
             G  +         H   L   +   G         +       A           A  
Sbjct: 26  RYGRDYMTTVIREGNHTDELWAEAAKLGYLGVNLPEEYGGGGGGMAELSIVLEELGAAGS 85

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
               ++       +++A   T    + W P +                S+ +  G+TE  
Sbjct: 86  PLLMMIVSPAICGTVIARFGTEDQKRKWLPGL-------------ADGSLTMAFGITEPD 132

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP-RLLED 264
            G++   IT+  ++  D  + L G K F+S   ++DA +++ + E      L P   +  
Sbjct: 133 AGSNSHRITTTARRDGDD-WVLRGRKVFVSGVDIADATLIVGRTEDARSGKLKPCLFIVP 191

Query: 265 GSPNGLCYQRLKNKIGNRS-NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS 320
               G    R+   +   +     EL   +       L+GD +     +        + +
Sbjct: 192 RDAPGFSRNRID--MELHAPEKQFELVIDDVRLPADALVGDEDAGLLQLFAGLNPERIMT 249

Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380
           A   +   R +LA A+ YAR R V    +     +   +A   +D+  +  +  + A  +
Sbjct: 250 AAFGIGMGRFALARAVEYARTRQVWKEPIGSHQAIAHPLATAHIDLELSRLMMQKAARLY 309

Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440
           DE          A   A + KY   +     + +A+  +GG+G   E  +A     S   
Sbjct: 310 DEGDDIG-----AGEAANMAKYAAGEACVKAVDQAVHTLGGNGLTREYGLASLITASRVA 364

Query: 441 SI 442
            I
Sbjct: 365 RI 366


>gi|13542006|ref|NP_111694.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
 gi|14325439|dbj|BAB60343.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 397

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 124/364 (34%), Gaps = 27/364 (7%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--M 161
             +       G         +  +          A     A   A   +   V +A   +
Sbjct: 41  KEVFDGLAKMGFLGMAIPEKYGGMGMDAVSTGIVAEQIARADPTASIPVLFLVDNAWSYL 100

Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221
           ++    P V      K+              + S+  G+G TE   G+D+A I +   K 
Sbjct: 101 ISKYGNPEVFSGILQKV-------------ARGSLITGIGSTESGHGSDVAGIDTVAVKK 147

Query: 222 SDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276
            D  Y ++G K F+S       +   ++ + + + + G   +  L    S   +    L+
Sbjct: 148 GDE-YIVNGEKSFISLVRDIKEIGGGYVTVVKTDPKAGARGISLLYIPYSEE-IEIGYLE 205

Query: 277 NKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333
             +G   ++   L F++      +L+G  N     V +         +++S S    S+ 
Sbjct: 206 E-MGREGSSWGTLRFNDLHVPAKYLIGQENRGFNIVHEGFEFARGLISVISASMALKSIE 264

Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY- 392
               Y ++R   G  +     ++  +AD    + AA   +++    +D+ +   + + + 
Sbjct: 265 NGAAYMKQRKAFGNSIATFEGLQFQLADDVAKMEAALNFAYKALWIYDQEQRYGKYSRFQ 324

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452
              M  + K          + +AM+  G  GY ++       R   +  +  GS   M +
Sbjct: 325 VSKMIAMAKLISTTWGFDAVNDAMQWQGAYGYSKDCPEEWALRGIRSFQLAEGSREIMKI 384

Query: 453 DVLN 456
            +  
Sbjct: 385 IIAR 388


>gi|239928342|ref|ZP_04685295.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291436669|ref|ZP_06576059.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
 gi|291339564|gb|EFE66520.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 28/319 (8%)

Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206
           EA   ++     A  V    T      W P++                S      L+E  
Sbjct: 75  EAETALALQGLGAHPVHAHGTAAQRARWLPRV-------------GDGSAVAAFALSEPG 121

Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDG 265
            G+D AA++        G + L+G K ++S+ P +D + + A+     G   V   L   
Sbjct: 122 AGSDAAALSLAAHPDGPGRWRLTGEKCWISNAPEADLYTVFARTTPGAGARGVTAFLVPA 181

Query: 266 SPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321
              GL  + L     + IG+     V +   +  G + G   V+ G +     L+     
Sbjct: 182 DRPGLTGRALDMLSPHPIGSLGLDAVPVTADDLLGEVDGGFRVAMGTL----NLLRPSVG 237

Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
             +V   + +L   + +  RR   GG L D   +   +A++AL   +A  + +  A ++D
Sbjct: 238 AFAVGMAQAALDATLDHTARRDAFGGRLKDLQSVAHQVAEMALRTESARLMVYAAATAYD 297

Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
                          A + K    + A  V+  A++  G         +   YRE  A  
Sbjct: 298 AGAPD------VPRRAAMAKLLATETAQYVVDRAVQLHGARALQRGHLLEHLYREVRAPR 351

Query: 442 ILLGSGNAMVLDVLNLLEK 460
           I  G+       V   L K
Sbjct: 352 IYEGASEVQRGIVAKELYK 370


>gi|238506004|ref|XP_002384204.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|220690318|gb|EED46668.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 531

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 124/362 (34%), Gaps = 58/362 (16%)

Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163
             +L      GL  +  +          A  +    +  +       +   S  + + + 
Sbjct: 84  RKILEEMGELGLLGASIEGYGCAGASTVASGLITKEVERVDSGYRSGMSVQSSLAMTAIY 143

Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KI 221
              +  +   + P +              K  +A   GLTE   G+D  ++ +  +    
Sbjct: 144 EFGSQELKDRFLPGL-------------AKGKIAGCFGLTEPNHGSDPGSMETVAREHPT 190

Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNG-LCYQRLKN 277
             G Y LSG K W  +SP+SD  I+ A++E  G++  F+V R   D  P G L    +KN
Sbjct: 191 KKGYYSLSGTKTWITNSPISDILIVWAKLESTGKIRGFVVER---DQCPPGTLETPAIKN 247

Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337
           K       T                      +  +     L  A  ++  +   L+ A  
Sbjct: 248 K-------TA---------------------LTGVYHRARLGIAFGAMGALEDCLSRART 279

Query: 338 YARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396
           YA  R    G  L    ++++ +AD A D A  T  + ++A   DE KS  E       M
Sbjct: 280 YALERKQFKGNPLAKYQLIQKKLADAATDAAYGTLAATQVARLKDEGKSTPE-------M 332

Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456
             + K   C  A A      E  GG+   +E  I RH           G  +   L +  
Sbjct: 333 ISMIKRQNCDRALANSRILQEVFGGNATSDEYHIGRHVANLFVVQTYEGQSDIHSLILGR 392

Query: 457 LL 458
            +
Sbjct: 393 AI 394


>gi|171680058|ref|XP_001904975.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939655|emb|CAP64882.1| unnamed protein product [Podospora anserina S mat+]
          Length = 446

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 114/311 (36%), Gaps = 25/311 (8%)

Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219
            ++    +P + +   P I                   I + +TE   G+D+A I +  +
Sbjct: 134 PLILKFGSPILQEKTVPDIL-------------LGRKRICIAITEPEAGSDVAGIVTTAK 180

Query: 220 KISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLED-GSPNGLCYQRL 275
           K  DG  Y ++G K ++++ +   +  +A   G  G     +  L+    +  G+  +RL
Sbjct: 181 KSPDGQHYIVNGTKKWITNGIWSDYASMAVRTGPPGSGAAGISLLVVPLKNHPGVNMRRL 240

Query: 276 KNKIGNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332
           K   G  S  T  +E  +       L+G  N     +        L  A  +    RV+L
Sbjct: 241 K-VAGQISAGTTFIELDDVQVPVENLIGKENHGMKYIMTNFNHERLAVATGTTRQARVAL 299

Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392
           + A  Y  +R   G  L++QPV++  +A     + + TA     A          E    
Sbjct: 300 SAAFEYVMKREAFGKPLVEQPVVRHRLAKAGALLESLTAWVEHFAYWMTR-LPAEEADVK 358

Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI---EERSIARHYRESPANSILLGSGNA 449
              M  + K     +       A+   GG+G+    +       YRE P   I  GS + 
Sbjct: 359 LGGMTALLKAQAGIVFRECADTAVLLFGGNGFTTTGQGMVAEMLYREVPGTRIPGGSEDV 418

Query: 450 MVLDVLNLLEK 460
           ++   +  L K
Sbjct: 419 LLDLAVRQLLK 429


>gi|119610654|gb|EAW90248.1| acyl-Coenzyme A dehydrogenase, very long chain, isoform CRA_c [Homo
           sapiens]
          Length = 446

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 87/267 (32%), Gaps = 30/267 (11%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA-GHLMSPSVTSASMVALMTTPRV 170
             G            V        R   +  M  L     L +        + L  T   
Sbjct: 138 ELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQ 197

Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY--CL 228
            + + PK+ S E                   LTE   G+D A+I +       G Y    
Sbjct: 198 KEKYLPKLASGE-------------TVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLN 244

Query: 229 SGHKWFLSSPMSDAFIMLAQV---EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
               W  +  ++D F + A+    +   G     +   + +    G+ +   + K+G ++
Sbjct: 245 GSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKA 304

Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIH 337
           + T E+ F           NV        K+ ++ L++    ++          +A+A+ 
Sbjct: 305 SNTAEVFFDGVRVPS---ENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVD 361

Query: 338 YARRRHVSGGILIDQPVMKRAIADIAL 364
           +A  R   G  + +  +++  +A + +
Sbjct: 362 HATNRTQFGEKIHNFGLIQEKLARMVM 388


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.147    0.404 

Lambda     K      H
   0.267   0.0451    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,701,693,512
Number of Sequences: 14124377
Number of extensions: 487400810
Number of successful extensions: 1776694
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 18043
Number of HSP's successfully gapped in prelim test: 12534
Number of HSP's that attempted gapping in prelim test: 1657749
Number of HSP's gapped (non-prelim): 44328
length of query: 562
length of database: 4,842,793,630
effective HSP length: 144
effective length of query: 418
effective length of database: 2,808,883,342
effective search space: 1174113236956
effective search space used: 1174113236956
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 84 (36.8 bits)